607 9915 104 3 10 chr13 3000000 3001452 -117282860 - L1_Mm LINE L1 -563 5320 3879 1 607 2041 105 0 0 chr13 3001445 3001730 -117282582 + MusHAL1 LINE L1 1209 1493 -1219 2 607 21 0 0 0 chr13 3002621 3002642 -117281670 + AT_rich Low_complexity Low_complexity 1 21 0 3 607 302 158 14 41 chr13 3003216 3003361 -117280951 + A-rich Low_complexity Low_complexity 4 144 0 4 607 1148 83 0 0 chr13 3003441 3003585 -117280727 + B1_Mus2 SINE Alu 3 146 -1 5 607 181 75 24 24 chr13 3003810 3003851 -117280461 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 6 607 618 209 43 82 chr13 3004095 3004303 -117280009 - RMER3D-int LTR ERVK -2543 299 100 7 607 269 196 0 0 chr13 3004447 3004498 -117279814 - Lx7 LINE L1 -18 7678 7628 8 607 33 0 0 0 chr13 3005499 3005532 -117278780 + AT_rich Low_complexity Low_complexity 1 33 0 9 607 367 284 0 0 chr13 3006175 3006263 -117278049 - ID_B1 SINE B4 -18 206 119 1 607 213 330 165 0 chr13 3006185 3006282 -117278030 - B1F SINE Alu -31 118 6 1 607 1926 156 3 10 chr13 3006446 3006756 -117277556 - RLTR10E LTR ERVK -3 308 1 1 607 417 226 62 102 chr13 3007414 3007542 -117276770 + ID_B1 SINE B4 90 212 -12 1 607 2118 86 30 3 chr13 3008917 3009219 -117275093 - L1_Mus3 LINE L1 -6 6632 6323 1 607 2671 126 30 79 chr13 3009634 3010141 -117274171 - RLTR45 LTR ERVK 0 482 1 1 607 2108 172 36 8 chr13 3012479 3012871 -117271441 - MTC LTR MaLR -10 411 9 1 607 4293 145 24 39 chr13 3012879 3013633 -117270679 + RLTR14-int LTR ERV1 3797 4539 -778 1 607 2803 106 28 0 chr13 3013632 3014029 -117270283 + MurERV4_19-int LTR ERVK 1852 2259 -3521 1 607 269 341 28 47 chr13 3014247 3014462 -117269850 + RMER5 LTR ERV1 273 483 -51 1 607 379 252 48 10 chr13 3014468 3014572 -117269740 + ORR1E LTR MaLR 3 110 -249 2 607 272 137 0 19 chr13 3014603 3014655 -117269657 + GA-rich Low_complexity Low_complexity 6 56 0 2 75 614 247 6 18 chr13 3014655 3014824 -117269488 + RLTR14-int LTR ERV1 5076 5242 -75 2 608 2307 117 132 14 chr13 3014833 3015258 -117269054 - IAPLTR2_Mm LTR ERVK 0 475 1 2 608 6160 46 3 19 chr13 3015258 3016016 -117268296 - IAPEz-int LTR ERVK 0 6481 5736 2 608 2254 61 0 4 chr13 3016015 3016294 -117268018 - IAPEz-int LTR ERVK -4845 1636 1359 2 608 3795 56 26 18 chr13 3016294 3016785 -117267527 - IAPEz-int LTR ERVK -5819 662 168 2 608 226 327 0 0 chr13 3016785 3016840 -117267472 - RLTR27 LTR ERVK -34 275 221 2 608 1115 114 76 60 chr13 3016840 3017097 -117267215 - IAPEz-int LTR ERVK -7331 250 10 2 608 307 94 0 19 chr13 3017112 3017166 -117267146 - IAPEz-int LTR ERVK -1932 55 3 2 608 2307 117 132 14 chr13 3017168 3017593 -117266719 - IAPLTR2_Mm LTR ERVK 0 475 1 2 608 311 149 0 0 chr13 3017615 3017662 -117266650 + RLTR14-int LTR ERV1 5268 5314 -3 2 608 1958 203 3 3 chr13 3017684 3018065 -117266247 + RLTR14 LTR ERV1 2 382 0 2 608 1125 83 0 0 chr13 3018264 3018409 -117265903 - B1_Mus2 SINE Alu -2 145 1 2 608 1967 213 131 37 chr13 3018430 3019115 -117265197 - L1_Rod LINE L1 -3645 2202 1448 2 608 369 0 0 0 chr13 3019115 3019156 -117265156 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 608 1967 213 131 37 chr13 3019156 3019193 -117265119 - L1_Rod LINE L1 -4400 1447 1412 2 608 1066 106 0 0 chr13 3019235 3019377 -117264935 - B1_Mus1 SINE Alu -6 142 1 2 608 239 210 16 0 chr13 3019382 3019444 -117264868 + MTD LTR MaLR 329 391 -28 2 608 4493 12 2 0 chr13 3020259 3020751 -117263561 - MT2_Mm LTR ERVL 0 493 1 3 608 321 0 0 0 chr13 3020751 3020789 -117263523 - MERVL-int LTR ERVL 0 5485 5448 3 608 351 179 46 35 chr13 3020789 3020876 -117263436 - ORR1A3-int LTR MaLR -1323 640 553 3 608 48272 17 6 0 chr13 3020876 3026202 -117258110 - MERVL-int LTR ERVL -125 5360 1 3 608 4493 12 2 0 chr13 3026202 3026694 -117257618 - MT2_Mm LTR ERVL 0 493 1 3 608 1595 247 29 5 chr13 3026694 3027076 -117257236 - Lx5 LINE L1 -12 7038 6648 3 608 615 142 38 0 chr13 3027077 3027183 -117257129 + RLTR11A LTR ERVK 3 112 -416 3 608 547 216 6 36 chr13 3027445 3027613 -117256699 + RNLTR23 LTR ERVK 480 642 0 3 608 2132 153 29 12 chr13 3027613 3028028 -117256284 + RLTR11A LTR ERVK 107 528 0 3 608 228 189 0 0 chr13 3028028 3028065 -117256247 - Lx5 LINE L1 -402 6648 6612 3 608 612 101 0 0 chr13 3028206 3028295 -117256017 + (TC)n Simple_repeat Simple_repeat 2 90 0 3 608 1133 75 7 0 chr13 3028316 3028463 -117255849 - B1_Mus1 SINE Alu 0 148 1 3 608 401 0 0 20 chr13 3029807 3029857 -117254455 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 3 608 618 297 69 11 chr13 3029862 3030124 -117254188 + Lx8 LINE L1 6197 6473 -1000 3 608 1062 81 0 0 chr13 3030216 3030364 -117253948 + B2_Mm2 SINE B2 1 148 -47 3 608 315 0 0 0 chr13 3030369 3030404 -117253908 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 4 608 716 190 21 14 chr13 3030594 3030738 -117253574 + B1_Mur4 SINE Alu 6 150 0 4 608 196 186 34 0 chr13 3030738 3030797 -117253515 + GA-rich Low_complexity Low_complexity 3 63 0 4 608 620 246 137 59 chr13 3030867 3031122 -117253190 + B4A SINE B4 2 276 -16 4 608 391 306 38 13 chr13 3031141 3031300 -117253012 - MIR SINE MIR -48 214 52 4 608 456 19 0 0 chr13 3031386 3031439 -117252873 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 4 608 1033 222 90 16 chr13 3032011 3032267 -117252045 + MTEa LTR MaLR 1 275 -104 4 608 3053 177 20 4 chr13 3032277 3032838 -117251474 + RMER15 LTR ERVL 6 575 0 4 608 967 207 101 44 chr13 3032914 3033162 -117251150 - RLTR11A LTR ERVK -266 262 1 4 608 1057 209 5 5 chr13 3033171 3033392 -117250920 + URR1B DNA MER1_type 5 225 0 4 608 824 341 49 21 chr13 3033392 3033719 -117250593 - MER45B DNA Tip100 -694 346 11 5 608 236 186 0 0 chr13 3033730 3033773 -117250539 + MER20 DNA MER1_type 177 219 0 5 608 231 192 0 0 chr13 3034159 3034237 -117250075 + T-rich Low_complexity Low_complexity 2 79 0 5 608 1034 110 7 0 chr13 3034238 3034384 -117249928 - B1_Mus1 SINE Alu 0 148 2 5 608 439 179 64 64 chr13 3034385 3034510 -117249802 + RLTR9A LTR ERVK 244 368 0 5 608 391 350 69 30 chr13 3034540 3034773 -117249539 + MLT1E2 LTR MaLR 50 291 -336 5 608 273 151 0 0 chr13 3034943 3034996 -117249316 + A-rich Low_complexity Low_complexity 1 53 0 5 608 2564 116 30 45 chr13 3035332 3035820 -117248492 + RLTR1D LTR ERV1 5 589 -16 5 608 1120 174 140 14 chr13 3036006 3036292 -117248020 + RLTR11A2 LTR ERVK 206 527 0 5 608 644 0 13 0 chr13 3036648 3036724 -117247588 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 608 679 234 0 0 chr13 3036940 3037068 -117247244 + B1_Mur3 SINE Alu 1 128 -21 6 608 324 130 0 0 chr13 3037694 3037763 -117246549 + (T)n Simple_repeat Simple_repeat 1 69 0 6 608 387 0 0 0 chr13 3039492 3039535 -117244777 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 6 608 291 161 0 0 chr13 3039956 3040012 -117244300 + C-rich Low_complexity Low_complexity 3 58 0 6 608 8030 62 1 7 chr13 3040397 3040700 -117243612 - L1Md_F2 LINE L1 0 6585 6284 6 608 3826 48 16 33 chr13 3040700 3041190 -117243122 - LTRIS_Mm LTR ERV1 0 482 1 6 608 17410 69 1 2 chr13 3041190 3043842 -117240470 - L1Md_F2 LINE L1 -302 6283 3635 6 608 3898 115 4 5 chr13 3043837 3045073 -117239239 - L1Md_F2 LINE L1 -4258 1628 449 6 608 226 0 0 56 chr13 3045149 3045185 -117239127 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6 608 441 254 0 9 chr13 3045287 3045402 -117238910 - B1_Mur1 SINE Alu -24 125 12 6 608 240 311 16 54 chr13 3045291 3045420 -117238892 - ID_B1 SINE B4 -25 199 76 6 608 1113 70 7 7 chr13 3046649 3046792 -117237520 + B1_Mus2 SINE Alu 5 147 0 6 608 191 36 36 0 chr13 3047374 3047402 -117236910 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 7 608 330 268 0 11 chr13 3047743 3047830 -117236482 + RSINE1 SINE B4 68 153 -12 7 608 23 33 0 0 chr13 3049730 3049760 -117234552 + AT_rich Low_complexity Low_complexity 1 30 0 7 608 321 89 0 0 chr13 3050126 3050171 -117234141 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 608 2047 193 56 11 chr13 3050203 3050665 -117233647 - Lx4B LINE L1 -2 7056 6574 7 608 594 114 143 0 chr13 3050684 3050789 -117233523 - PB1D9 SINE Alu 0 120 1 7 608 3798 119 16 28 chr13 3051372 3051983 -117232329 - L1_Mm LINE L1 -949 4934 4331 7 608 2053 191 70 15 chr13 3052126 3052584 -117231728 - Lx4B LINE L1 -2 7056 6574 7 608 1074 124 0 0 chr13 3053346 3053507 -117230805 - B2_Mm2 SINE B2 -34 161 1 7 608 257 182 0 0 chr13 3054287 3054331 -117229981 + MIRc SINE MIR 96 139 -129 7 608 210 263 38 50 chr13 3055925 3056005 -117228307 + ID4 SINE ID 2 80 -3 8 608 1600 270 45 14 chr13 3056137 3056577 -117227735 + Lx6 LINE L1 6977 7430 -30 8 608 585 154 154 0 chr13 3057183 3057306 -117227006 + B1_Mus1 SINE Alu 5 146 -2 8 608 183 80 0 0 chr13 3057306 3057331 -117226981 + (GGGAA)n Simple_repeat Simple_repeat 2 26 0 8 608 712 173 20 35 chr13 3057331 3057861 -117226451 + GA-rich Low_complexity Low_complexity 1 522 0 8 608 402 141 106 0 chr13 3057872 3057957 -117226355 + B3A SINE B2 1 94 -104 8 608 7114 54 28 0 chr13 3057975 3058846 -117225466 - L1_Mus1 LINE L1 0 6567 5673 8 608 324 324 10 0 chr13 3058853 3058955 -117225357 + B3 SINE B2 106 208 -8 8 608 262 245 154 2 chr13 3059028 3059128 -117225184 + B1F2 SINE Alu 4 116 -1 8 608 699 252 64 10 chr13 3059541 3059745 -117224567 + B3 SINE B2 1 215 -1 8 608 774 248 167 44 chr13 3060878 3061148 -117223164 + Lx8 LINE L1 7171 7473 0 9 608 321 284 21 21 chr13 3061802 3061899 -117222413 - B1F SINE Alu -39 110 14 9 608 5903 58 7 7 chr13 3062742 3063482 -117220830 + L1_Mus1 LINE L1 5824 6563 -4 9 608 617 232 213 29 chr13 3063906 3064287 -117220025 + L1MB2 LINE L1 5620 6070 -101 9 608 241 275 200 0 chr13 3064646 3064726 -117219586 - PB1D10 SINE Alu -21 96 1 9 608 272 131 43 14 chr13 3064894 3064964 -117219348 + (TA)n Simple_repeat Simple_repeat 2 73 0 9 608 882 153 0 0 chr13 3065773 3065910 -117218402 - B1_Mus2 SINE Alu -10 137 1 9 608 231 114 0 0 chr13 3066045 3066080 -117218232 - URR1B DNA MER1_type 0 225 191 9 608 429 300 59 34 chr13 3066098 3066504 -117217808 + RLTR15 LTR ERVK 19 294 -65 9 608 664 175 169 36 chr13 3066553 3066719 -117217593 - URR1B DNA MER1_type -37 188 1 9 608 420 187 43 11 chr13 3067010 3067102 -117217210 - RSINE1 SINE B4 -55 110 16 9 608 38134 46 4 7 chr13 3067382 3073430 -117210882 - L1Md_F2 LINE L1 0 6582 559 1 608 7192 46 1 0 chr13 3073459 3074315 -117209997 - L1_Mm LINE L1 -105 5778 4922 1 608 5037 64 5 0 chr13 3074315 3074955 -117209357 + L1Md_F2 LINE L1 5939 6581 -1 1 608 1151 75 0 0 chr13 3074971 3075118 -117209194 + B1_Mus2 SINE Alu 1 147 0 1 608 216 0 0 0 chr13 3075118 3075142 -117209170 + (A)n Simple_repeat Simple_repeat 1 24 0 1 608 267 308 60 42 chr13 3075827 3076018 -117208294 - MTEb LTR MaLR -2 377 186 1 608 722 249 158 42 chr13 3076010 3076270 -117208042 - MTEa-int LTR MaLR -48 1532 1243 1 608 1424 314 122 82 chr13 3076273 3077287 -117207025 - MTEa-int LTR MaLR -524 1056 2 1 608 362 264 45 18 chr13 3077286 3077398 -117206914 - MTEa LTR MaLR 0 379 265 1 608 188 342 95 17 chr13 3077584 3077700 -117206612 + MIR SINE MIR 84 208 -54 1 608 7877 46 28 7 chr13 3077700 3077782 -117206530 - L1Md_F2 LINE L1 0 6582 6481 1 608 207 0 0 0 chr13 3077782 3077805 -117206507 + (CCCA)n Simple_repeat Simple_repeat 1 23 0 1 608 12251 55 14 4 chr13 3077805 3079933 -117204379 - L1Md_F2 LINE L1 -102 6480 4348 1 608 7871 69 4 3 chr13 3080209 3081237 -117203075 - L1_Mus1 LINE L1 -1 6653 5544 1 608 262 0 53 0 chr13 3084468 3084506 -117199806 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1 608 196 289 94 19 chr13 3084972 3085078 -117199234 - MIRm SINE MIR -3 273 160 1 608 372 22 0 0 chr13 3089890 3089935 -117194377 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 608 563 206 315 12 chr13 3090076 3090238 -117194074 + B3 SINE B2 2 212 -4 1 608 180 0 0 0 chr13 3090786 3090806 -117193506 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 608 585 0 0 0 chr13 3091942 3092007 -117192305 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 608 588 185 111 37 chr13 3092394 3092529 -117191783 - B1_Mur1 SINE Alu 0 149 5 1 608 344 165 11 0 chr13 3092575 3092666 -117191646 + GA-rich Low_complexity Low_complexity 1 92 0 1 608 446 266 18 9 chr13 3093001 3093115 -117191197 - RSINE1 SINE B4 -40 125 11 1 608 982 192 27 0 chr13 3093563 3093750 -117190562 - B2_Mm2 SINE B2 -3 192 1 1 608 248 265 0 20 chr13 3094103 3094184 -117190128 + B4A SINE B4 192 271 -21 1 608 387 0 0 0 chr13 3094184 3094227 -117190085 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 608 248 265 0 20 chr13 3094227 3094245 -117190067 + B4A SINE B4 272 289 -3 1 608 342 362 85 6 chr13 3095235 3095399 -117188913 + L1ME3B LINE L1 1576 1752 -4414 1 608 474 332 60 43 chr13 3095515 3095867 -117188445 + L1ME3B LINE L1 5535 5892 -348 1 608 224 330 40 27 chr13 3096347 3096513 -117187799 - L2b LINE L2 -279 3096 2930 1 608 189 107 0 0 chr13 3096912 3096940 -117187372 + (ATG)n Simple_repeat Simple_repeat 2 29 0 1 608 225 296 48 48 chr13 3097085 3097188 -117187124 + Arthur1B DNA Tip100 1 103 -1122 1 608 458 242 62 19 chr13 3097377 3097537 -117186775 + MER20 DNA MER1_type 52 218 -1 1 608 561 329 96 8 chr13 3097571 3097822 -117186490 + Arthur1B DNA Tip100 368 640 -585 1 608 435 256 41 82 chr13 3097920 3098090 -117186222 + RSINE1 SINE B4 3 165 0 1 608 2962 49 52 0 chr13 3100434 3100803 -117183509 - RLTR10 LTR ERVK -2 388 1 1 608 8359 31 20 3 chr13 3100803 3101783 -117182529 - RLTR10-int LTR ERVK -1 1986 990 1 608 3649 39 2 34 chr13 3101794 3102565 -117181747 - RLTR10-int LTR ERVK -1127 860 41 1 608 2458 73 10 39 chr13 3102577 3102961 -117181351 - RLTR10 LTR ERVK -2 388 16 1 608 526 45 0 0 chr13 3102925 3102992 -117181320 + RLTR10 LTR ERVK 16 82 -308 1 608 332 319 0 20 chr13 3104036 3104142 -117180170 - PB1D7 SINE Alu -2 118 15 1 608 195 162 0 0 chr13 3104645 3104682 -117179630 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1 608 201 39 0 0 chr13 3104709 3104735 -117179577 + (ATTG)n Simple_repeat Simple_repeat 4 29 0 1 608 512 204 35 17 chr13 3104759 3104874 -117179438 - RSINE1 SINE B4 -46 119 3 1 608 614 233 8 0 chr13 3107324 3107453 -117176859 - B1_Mur3 SINE Alu -9 140 11 1 608 192 40 0 0 chr13 3107617 3107642 -117176670 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 608 275 104 21 0 chr13 3107735 3107783 -117176529 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 608 21 0 0 0 chr13 3108192 3108213 -117176099 + AT_rich Low_complexity Low_complexity 1 21 0 1 608 4349 39 8 7 chr13 3108625 3109636 -117174676 + L1Md_Gf LINE L1 1 604 -5918 1 608 36177 35 0 0 chr13 3109656 3115149 -117169163 + L1Md_T LINE L1 1 5589 -297 1 608 9467 5 7 0 chr13 3115149 3116138 -117168174 + L1Md_T LINE L1 5590 6585 0 1 608 25 0 0 0 chr13 3116164 3116189 -117168123 + AT_rich Low_complexity Low_complexity 1 25 0 1 608 303 175 0 0 chr13 3116330 3116387 -117167925 + GA-rich Low_complexity Low_complexity 3 59 0 1 608 288 261 229 14 chr13 3116417 3116557 -117167755 + B3 SINE B2 2 171 -45 1 608 1203 102 0 0 chr13 3116673 3117007 -117167305 + (TGG)n Simple_repeat Simple_repeat 1 334 0 1 608 275 0 0 161 chr13 3117497 3117640 -117166672 + (CACTC)n Simple_repeat Simple_repeat 3 122 0 1 608 225 182 0 0 chr13 3119509 3119564 -117164748 + CT-rich Low_complexity Low_complexity 2 56 0 1 608 1272 41 7 0 chr13 3119635 3119781 -117164531 - B1_Mm SINE Alu 0 147 1 1 608 234 289 26 13 chr13 3119846 3119923 -117164389 - MER5A DNA MER1_type -110 79 2 1 608 204 167 24 0 chr13 3122492 3122534 -117161778 + T-rich Low_complexity Low_complexity 2 44 0 1 608 299 202 23 20 chr13 3122666 3122773 -117161539 + PB1D9 SINE Alu 23 132 -17 1 608 425 225 193 73 chr13 3123159 3123351 -117160961 - B3 SINE B2 -1 215 1 1 608 448 265 11 85 chr13 3124862 3125039 -117159273 + RLTR19-int LTR ERVK 3549 3712 -2425 1 608 2542 148 96 39 chr13 3125048 3125561 -117158751 - MT2B2 LTR ERVL -42 542 1 1 608 391 157 193 0 chr13 3125591 3125674 -117158638 - LSU-rRNA_Hsa rRNA rRNA -735 4300 4202 1 608 290 115 0 19 chr13 3125697 3125750 -117158562 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 608 198 0 0 0 chr13 3125753 3125775 -117158537 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 608 628 227 11 11 chr13 3125835 3126013 -117158299 + RMER3D-int LTR ERVK 1098 1275 -1567 1 608 255 103 0 0 chr13 3126018 3126057 -117158255 + (ATTTG)n Simple_repeat Simple_repeat 1 39 0 1 608 426 24 0 78 chr13 3126058 3126148 -117158164 + (TTTTTG)n Simple_repeat Simple_repeat 6 88 0 1 608 1199 68 7 0 chr13 3126148 3126295 -117158017 - B1_Mus1 SINE Alu 0 148 1 1 608 279 350 46 61 chr13 3126388 3126519 -117157793 + RSINE1 SINE B4 19 147 -18 1 608 339 25 0 0 chr13 3126521 3126561 -117157751 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 608 1258 147 47 14 chr13 3127920 3128134 -117156178 - Lx3A LINE L1 -3 6978 6758 1 608 251 308 0 33 chr13 3129294 3129395 -117154917 + ID4 SINE ID 8 100 -52 1 608 239 113 0 19 chr13 3129582 3129636 -117154676 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 608 275 349 66 0 chr13 3129695 3129801 -117154511 + RSINE1 SINE B4 15 127 -38 1 608 222 37 0 0 chr13 3129845 3129872 -117154440 + (A)n Simple_repeat Simple_repeat 1 27 0 1 608 3149 177 19 3 chr13 3130137 3130722 -117153590 + L1_Mur2 LINE L1 3086 3679 -2198 1 608 3008 112 20 11 chr13 3130855 3131297 -117153015 + L1_Mus3 LINE L1 6191 6636 -2 1 608 370 177 15 0 chr13 3131325 3131405 -117152907 + L1_Rod LINE L1 4202 4308 -1835 1 608 277 221 39 110 chr13 3131421 3131548 -117152764 - Lx8 LINE L1 -1224 6249 6132 1 608 518 274 102 15 chr13 3131631 3131768 -117152544 - RSINE1 SINE B4 -12 153 5 1 608 541 317 91 49 chr13 3132821 3133067 -117151245 - L1MD1 LINE L1 -19 6223 5978 1 608 1536 206 83 44 chr13 3133067 3133427 -117150885 - ORR1D1 LTR MaLR 0 374 1 1 608 541 317 91 49 chr13 3133427 3133674 -117150638 - L1MD1 LINE L1 -265 5977 5709 1 608 731 200 0 0 chr13 3133680 3133805 -117150507 - Lx6 LINE L1 -1091 6369 6245 1 608 449 258 100 11 chr13 3134630 3134891 -117149421 - L1MD1 LINE L1 -746 5496 5215 1 608 322 271 74 0 chr13 3135037 3135159 -117149153 - L1MD1 LINE L1 -991 5155 5025 1 608 2065 264 35 5 chr13 3135171 3135737 -117148575 + Lx3C LINE L1 6343 6939 -70 1 608 355 266 53 9 chr13 3135791 3135905 -117148407 - L1MD1 LINE L1 -1155 4991 4873 1 608 2967 246 46 23 chr13 3135917 3136659 -117147653 - Lx6 LINE L1 -920 6540 5782 1 608 1590 186 123 3 chr13 3140717 3141068 -117143244 - Lx6 LINE L1 -740 5827 5437 1 608 624 274 4 35 chr13 3141055 3141286 -117143026 - Lx6 LINE L1 -4115 1765 1542 1 608 4322 186 28 1 chr13 3141286 3142035 -117142277 + Lx2A1 LINE L1 6237 7005 -3 1 608 966 273 66 69 chr13 3142058 3142495 -117141817 - RMER6B LTR ERVK -25 436 1 1 608 664 182 87 43 chr13 3142808 3142992 -117141320 + RLTR19 LTR ERVK 9 200 -299 1 608 1310 251 73 13 chr13 3143212 3143584 -117140728 - RLTR19 LTR ERVK -105 394 1 1 608 338 276 57 0 chr13 3143630 3143753 -117140559 + ID_B1 SINE B4 92 221 -3 1 608 1853 220 88 26 chr13 3144631 3145088 -117139224 + RLTR19 LTR ERVK 8 492 -7 1 9 874 228 131 153 chr13 3145382 3145833 -117138479 + RMER6B LTR ERVK 1 441 -20 1 609 7997 175 11 19 chr13 3145860 3148530 -117135782 - Lx2A1 LINE L1 -4 7004 4350 1 609 4215 112 128 80 chr13 3149509 3150357 -117133955 - RMER17D LTR ERVK 0 889 1 1 609 274 261 33 11 chr13 3150796 3150888 -117133424 + ID4_ SINE ID 8 99 -53 1 609 201 154 0 0 chr13 3151070 3151109 -117133203 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 609 210 122 49 0 chr13 3151269 3151310 -117133002 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 1 609 213 65 0 0 chr13 3151311 3151342 -117132970 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 609 3597 203 20 44 chr13 3151620 3152574 -117131738 + L1_Mur2 LINE L1 3074 4004 -1873 1 609 308 186 62 0 chr13 3152576 3152668 -117131644 + L1_Mur2 LINE L1 4105 4220 -1660 1 609 1324 208 3 12 chr13 3152672 3152998 -117131314 - ORR1A4-int LTR MaLR -923 1040 718 1 609 787 195 14 198 chr13 3152875 3153163 -117131149 - MT2B LTR ERVL -332 269 35 1 609 2915 198 32 69 chr13 3153047 3153789 -117130523 - ORR1A4-int LTR MaLR -1234 729 15 1 609 1001 234 129 98 chr13 3153799 3154117 -117130195 - ORR1A4 LTR MaLR -1 328 1 1 609 1746 171 3 7 chr13 3154126 3154427 -117129885 - ORR1A2 LTR MaLR -8 319 20 1 609 1170 89 0 0 chr13 3154627 3154773 -117129539 - B1_Mus1 SINE Alu -1 147 2 1 609 462 297 93 41 chr13 3154938 3155110 -117129202 - Lx8 LINE L1 -172 7301 7121 1 609 288 0 0 0 chr13 3155127 3155159 -117129153 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 1 609 2610 158 11 11 chr13 3156310 3157070 -117127242 + L1VL4 LINE L1 934 1693 -2221 1 609 5102 148 39 12 chr13 3157042 3158092 -117126220 + L1VL4 LINE L1 2685 3762 -2124 1 609 14150 72 2 4 chr13 3158090 3160885 -117123427 + L1Md_F LINE L1 306 3094 -2789 1 609 2861 83 99 0 chr13 3160885 3161155 -117123157 + RLTR10A LTR ERVK 1 279 -132 2 609 435 38 0 0 chr13 3161155 3161208 -117123104 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 609 2861 83 99 0 chr13 3161208 3161311 -117123001 + RLTR10A LTR ERVK 280 410 -1 2 609 1391 124 0 32 chr13 3161314 3161716 -117122596 + IAP-d-int LTR ERVK 295 602 -1385 2 609 3643 56 84 14 chr13 3161716 3162203 -117122109 + IAP-d-int LTR ERVK 5007 5527 -1015 2 609 1691 60 5 5 chr13 3162207 3162425 -117121887 + IAP-d-int LTR ERVK 5667 5884 -658 2 609 5079 77 19 10 chr13 3162426 3163107 -117121205 + RLTR10-int LTR ERVK 1288 1974 -13 2 609 18997 77 4 1 chr13 3163107 3163119 -117121193 + L1Md_F2 LINE L1 3077 3088 -2795 2 609 2810 82 84 0 chr13 3163119 3163388 -117120924 + RLTR10A LTR ERVK 1 279 -132 2 609 351 0 0 0 chr13 3163388 3163427 -117120885 + (GA)n Simple_repeat Simple_repeat 2 40 0 2 609 2810 82 84 0 chr13 3163427 3163536 -117120776 + RLTR10A LTR ERVK 280 410 -1 2 609 18997 77 4 1 chr13 3163536 3166025 -117118287 + L1Md_F2 LINE L1 3089 5585 -298 2 609 8651 45 2 6 chr13 3166026 3167022 -117117290 + L1Md_F2 LINE L1 5587 6578 -4 2 609 1183 49 7 0 chr13 3168560 3168704 -117115608 + B1_Mm SINE Alu 1 145 -2 2 609 231 61 0 0 chr13 3168705 3168738 -117115574 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2 609 9969 161 57 33 chr13 3168738 3170397 -117113915 + Lx2A1 LINE L1 5285 6999 -9 2 609 754 228 131 153 chr13 3170431 3170882 -117113430 - RMER6B LTR ERVK -20 441 1 2 609 1615 217 109 5 chr13 3171176 3171522 -117112790 - RLTR19 LTR ERVK -7 492 108 2 609 486 0 0 0 chr13 3171522 3171576 -117112736 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 609 1615 217 109 5 chr13 3171576 3171668 -117112644 - RLTR19 LTR ERVK -392 107 8 2 609 2086 107 238 44 chr13 3171879 3172338 -117111974 - RLTR6_Mm LTR ERV1 -70 584 37 2 609 68505 16 14 1 chr13 3172447 3180130 -117104182 - RLTR6-int LTR ERV1 0 7778 1 2 609 2175 111 227 44 chr13 3180131 3180611 -117103701 - RLTR6_Mm LTR ERV1 -50 604 37 2 609 318 287 52 0 chr13 3181394 3181509 -117102803 - ID_B1 SINE B4 -3 221 101 2 609 1198 203 52 12 chr13 3181563 3181926 -117102386 + RLTR19 LTR ERVK 1 378 -118 2 609 915 169 38 5 chr13 3182173 3182357 -117101955 - RLTR19 LTR ERVK -306 193 4 2 609 5396 80 19 4 chr13 3182521 3183245 -117101067 + L1Md_F2 LINE L1 5846 6580 -2 2 609 314 271 121 16 chr13 3183303 3183427 -117100885 + Lx5 LINE L1 6506 6642 -408 2 609 189 0 0 0 chr13 3183427 3183448 -117100864 + (A)n Simple_repeat Simple_repeat 1 21 0 2 609 6255 61 66 4 chr13 3184416 3185221 -117099091 - RLTR13A LTR ERVK 0 855 1 2 609 186 43 0 0 chr13 3186145 3186168 -117098144 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 2 609 327 25 0 0 chr13 3186197 3186237 -117098075 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 609 201 333 12 0 chr13 3186328 3186409 -117097903 - MER5A DNA MER1_type -96 93 12 2 609 21 57 0 0 chr13 3188884 3188919 -117095393 + AT_rich Low_complexity Low_complexity 1 35 0 2 609 244 253 63 0 chr13 3188975 3189070 -117095242 + B1_Mur4 SINE Alu 23 123 -27 2 609 186 118 0 0 chr13 3189444 3189478 -117094834 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2 609 255 289 114 23 chr13 3189499 3189630 -117094682 - B3 SINE B2 -1 215 73 2 609 1177 62 7 0 chr13 3191209 3191355 -117092957 + B1_Mus2 SINE Alu 1 147 0 2 609 281 330 39 10 chr13 3191419 3191523 -117092789 + RSINE1 SINE B4 5 111 -54 2 609 405 0 0 0 chr13 3191537 3191582 -117092730 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 609 759 137 108 21 chr13 3191854 3192048 -117092264 + L1_Mur2 LINE L1 3075 3285 -2592 2 609 375 58 19 19 chr13 3192028 3192081 -117092231 - L1_Mus2 LINE L1 -194 6372 6320 2 609 593 136 0 52 chr13 3192084 3192200 -117092112 + L1_Mus2 LINE L1 6439 6548 -18 2 609 23643 96 6 9 chr13 3192200 3196468 -117087844 + L1_Mus1 LINE L1 241 4639 -1244 2 609 2818 25 0 0 chr13 3196468 3196790 -117087522 - RLTRETN_Mm LTR ERVK 0 322 1 2 609 40915 28 15 8 chr13 3196790 3201601 -117082711 - MMETn-int LTR ERVK 0 4844 1 2 609 2794 31 0 0 chr13 3201601 3201923 -117082389 - RLTRETN_Mm LTR ERVK 0 322 1 2 609 194 0 0 37 chr13 3201923 3201950 -117082362 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 2 609 9166 86 18 3 chr13 3201950 3203538 -117080774 + L1_Mus1 LINE L1 4628 6246 -321 2 609 4704 62 5 2 chr13 3203538 3204123 -117080189 + LTRIS_Mus LTR ERV1 1 587 0 2 609 7258 75 36 5 chr13 3204123 3204439 -117079873 + L1_Mus1 LINE L1 6247 6567 0 2 609 790 196 12 1 chr13 3204464 3204646 -117079666 + L1_Mur2 LINE L1 3917 4099 -1781 2 609 34704 75 3 1 chr13 3204641 3211040 -117073272 - L1Md_F2 LINE L1 0 6582 170 2 609 8263 39 3 3 chr13 3211054 3212056 -117072256 - L1Md_F3 LINE L1 0 6584 5589 2 609 1241 210 140 0 chr13 3212060 3212417 -117071895 + L1_Mur2 LINE L1 4083 4489 -1388 2 609 2773 186 9 9 chr13 3212420 3212972 -117071340 - MT2B LTR ERVL -49 552 1 2 609 2517 187 49 47 chr13 3212972 3213584 -117070728 - ORR1A3-int LTR MaLR -394 1569 957 2 609 356 308 46 0 chr13 3213654 3213784 -117070528 + RSINE1 SINE B4 11 146 -19 2 609 725 229 53 27 chr13 3214259 3214447 -117069865 + B3A SINE B2 5 197 -1 2 609 201 39 0 0 chr13 3214459 3214485 -117069827 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 609 439 273 39 13 chr13 3214700 3214856 -117069456 + B4A SINE B4 114 273 -19 2 609 944 164 0 6 chr13 3215946 3216124 -117068188 + GA-rich Low_complexity Low_complexity 3 179 0 2 609 591 15 0 0 chr13 3216126 3216194 -117068118 + (GAAA)n Simple_repeat Simple_repeat 3 70 0 2 609 184 278 88 11 chr13 3216248 3216339 -117067973 - L3b LINE CR1 -196 286 189 2 609 307 206 137 0 chr13 3216539 3216641 -117067671 + Lx9 LINE L1 7522 7637 -7 2 609 4333 82 3 7 chr13 3216759 3217335 -117066977 - L1_Mus3 LINE L1 -2 6636 6063 2 609 318 106 0 0 chr13 3217779 3217826 -117066486 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 609 205 226 97 0 chr13 3217874 3217936 -117066376 + L3b LINE CR1 301 368 -114 2 609 893 248 26 93 chr13 3218180 3218482 -117065830 - B4 SINE B4 0 292 11 2 609 300 83 0 0 chr13 3219251 3219299 -117065013 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 2 609 195 42 0 0 chr13 3220359 3220383 -117063929 + (A)n Simple_repeat Simple_repeat 1 24 0 2 609 203 182 0 0 chr13 3221537 3221570 -117062742 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 609 3129 88 38 2 chr13 3222268 3222690 -117061622 + Lx3_Mus LINE L1 6565 7001 -8 2 609 185 35 0 65 chr13 3222700 3222731 -117061581 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2 609 347 311 37 15 chr13 3222758 3222892 -117061420 + RMER15 LTR ERVL 422 558 -17 2 609 26 0 0 0 chr13 3222933 3222959 -117061353 + AT_rich Low_complexity Low_complexity 1 26 0 2 609 1263 55 7 0 chr13 3223163 3223308 -117061004 + B1_Mm SINE Alu 2 147 0 2 609 235 65 43 0 chr13 3223308 3223354 -117060958 + (CAAAAA)n Simple_repeat Simple_repeat 6 53 0 2 609 621 224 0 0 chr13 3223508 3223669 -117060643 + (CA)n Simple_repeat Simple_repeat 1 161 0 2 609 486 286 0 0 chr13 3223687 3223799 -117060513 + Tigger5 DNA MER2_type 31 142 -2264 2 609 455 280 36 60 chr13 3224006 3224076 -117060236 + RSINE1 SINE B4 3 76 -89 2 609 3243 30 0 64 chr13 3224076 3224466 -117059846 - RLTR10B2 LTR ERVK 0 365 1 2 609 455 280 36 60 chr13 3224466 3224562 -117059750 + RSINE1 SINE B4 77 165 0 2 609 52 0 0 0 chr13 3224576 3224628 -117059684 + AT_rich Low_complexity Low_complexity 1 52 0 2 609 225 200 0 22 chr13 3224646 3224692 -117059620 - Lx5 LINE L1 -163 6887 6843 2 609 6690 166 27 5 chr13 3224662 3226017 -117058295 - Lx2B LINE L1 -200 6800 5426 2 609 474 339 125 24 chr13 3226055 3226430 -117057882 - Looper DNA PiggyBac -508 1050 638 2 609 668 243 5 89 chr13 3226591 3226781 -117057531 - B3 SINE B2 -8 208 35 2 609 654 298 108 51 chr13 3226783 3226989 -117057323 - Looper DNA PiggyBac -1060 498 306 2 609 4497 63 0 0 chr13 3226989 3227516 -117056796 - L1_Mus1 LINE L1 0 6567 6041 2 609 654 298 108 51 chr13 3227516 3227780 -117056532 - Looper DNA PiggyBac -1253 305 2 2 609 379 353 30 140 chr13 3228217 3228516 -117055796 + B4 SINE B4 3 268 -24 2 609 1528 170 172 32 chr13 3228516 3229117 -117055195 - RMER6C LTR ERVK 0 720 208 2 609 3339 49 26 0 chr13 3229162 3229552 -117054760 - MTB LTR MaLR 0 400 1 2 609 5921 80 70 83 chr13 3229552 3230533 -117053779 - MTB-int LTR MaLR 0 1098 125 2 609 3047 12 0 0 chr13 3230533 3230855 -117053457 + RLTRETN_Mm LTR ERVK 1 322 0 2 609 5921 80 70 83 chr13 3230855 3230896 -117053416 - MTB-int LTR MaLR -974 124 89 2 609 41884 27 4 4 chr13 3230896 3235697 -117048615 + MMETn-int LTR ERVK 43 4844 0 2 609 3039 12 0 0 chr13 3235697 3236019 -117048293 + RLTRETN_Mm LTR ERVK 1 322 0 2 609 985 69 0 0 chr13 3236019 3236149 -117048163 - MTB-int LTR MaLR -968 130 1 2 609 1718 53 70 0 chr13 3236175 3236402 -117047910 - ORR1A1 LTR MaLR -103 243 1 2 609 545 202 0 10 chr13 3236411 3236511 -117047801 - RMER6C LTR ERVK -621 99 1 2 609 1068 83 0 0 chr13 3237178 3237310 -117047002 + B1_Mm SINE Alu 4 135 -12 2 609 852 63 0 0 chr13 3238881 3238992 -117045320 + (GGGAGA)n Simple_repeat Simple_repeat 4 114 0 2 609 318 295 26 71 chr13 3239492 3239605 -117044707 - MIR SINE MIR -95 113 6 2 609 11696 147 53 55 chr13 3239898 3242944 -117041368 + ETnERV3-int LTR ERVK 2235 6071 -1173 2 609 1693 148 0 4 chr13 3242958 3243215 -117041097 + ETnERV3-int LTR ERVK 5529 5784 -24 2 609 3793 156 45 52 chr13 3243225 3244291 -117040021 + RLTR13D1 LTR ERVK 1 1004 -19 2 609 313 244 52 29 chr13 3244383 3244495 -117039817 + MIRc SINE MIR 45 161 -47 2 609 4078 206 72 35 chr13 3245001 3245775 -117038537 + L1_Mur3 LINE L1 138 949 -6763 2 609 1113 174 65 14 chr13 3245775 3245990 -117038322 - URR1A DNA MER1_type 0 226 1 2 609 4078 206 72 35 chr13 3245990 3246257 -117038055 + L1_Mur3 LINE L1 950 1217 -6495 2 609 2523 120 31 31 chr13 3246226 3246259 -117038053 + Lx2B LINE L1 6289 6317 -683 2 609 1936 121 3 24 chr13 3246259 3246555 -117037757 - Lx2B LINE L1 0 7000 6711 2 609 2523 120 31 31 chr13 3246555 3246934 -117037378 + Lx2B LINE L1 6318 6701 -299 2 609 5854 199 35 92 chr13 3246928 3248337 -117035975 + Lx7 LINE L1 6365 7694 -2 2 609 243 307 22 22 chr13 3249021 3249111 -117035201 - MIRc SINE MIR -115 153 64 2 609 241 170 69 20 chr13 3249406 3249508 -117034804 + (TA)n Simple_repeat Simple_repeat 2 108 0 2 609 495 0 0 0 chr13 3249870 3249925 -117034387 + (CAAAA)n Simple_repeat Simple_repeat 5 59 0 2 609 908 168 7 0 chr13 3251170 3251313 -117032999 + B1_Mur3 SINE Alu 6 149 0 2 609 2722 252 71 43 chr13 3251676 3252560 -117031752 + RCHARR1 DNA MER1_type 4 912 -62 2 609 464 0 18 0 chr13 3253070 3253126 -117031186 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 609 462 18 0 0 chr13 3253126 3253180 -117031132 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 609 261 0 0 0 chr13 3254731 3254760 -117029552 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 609 783 265 108 54 chr13 3254886 3255145 -117029167 - B4 SINE B4 -19 273 1 2 609 1305 236 53 45 chr13 3255182 3255649 -117028663 + MT2A LTR ERVL 2 560 -41 2 609 392 37 19 0 chr13 3255649 3255703 -117028609 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 2 609 479 112 0 12 chr13 3255703 3255784 -117028528 + (TG)n Simple_repeat Simple_repeat 2 81 0 3 609 695 254 72 132 chr13 3255784 3255812 -117028500 + MT2A LTR ERVL 561 587 -14 2 609 972 259 129 7 chr13 3255823 3256103 -117028209 + Lx8 LINE L1 6380 6693 -780 3 609 610 330 28 14 chr13 3256137 3256355 -117027957 + Lx8 LINE L1 7040 7260 -213 3 609 228 67 0 0 chr13 3256380 3256410 -117027902 + (T)n Simple_repeat Simple_repeat 1 30 0 3 609 1101 73 73 0 chr13 3256410 3256547 -117027765 - B1_Mm SINE Alu 0 147 1 3 609 1728 182 89 24 chr13 3256547 3256918 -117027394 - MTD LTR MaLR -6 413 19 3 609 4463 76 2 7 chr13 3256918 3257474 -117026838 + L1_Mus2 LINE L1 6008 6560 -6 3 609 2097 245 75 11 chr13 3258857 3259405 -117024907 + Lx6 LINE L1 6877 7459 -1 3 609 557 271 0 0 chr13 3259648 3259777 -117024535 + ID_B1 SINE B4 82 210 -14 3 609 1278 96 35 15 chr13 3259883 3260085 -117024227 + ORR1A0 LTR MaLR 53 258 -88 3 609 499 181 31 21 chr13 3260216 3260312 -117024000 - MurERV4-int LTR ERVK -4977 283 187 3 609 1116 101 0 0 chr13 3260320 3260498 -117023814 + (GGAGAA)n Simple_repeat Simple_repeat 2 179 0 3 609 662 0 13 0 chr13 3260519 3260597 -117023715 + (GAA)n Simple_repeat Simple_repeat 3 81 0 3 609 29101 78 1 3 chr13 3260614 3265526 -117018786 + L1Md_F2 LINE L1 184 5088 -795 3 609 2072 45 0 0 chr13 3265524 3265769 -117018543 + L1Md_F2 LINE L1 5342 5586 -297 3 609 8392 52 2 0 chr13 3265770 3266744 -117017568 + L1Md_F2 LINE L1 5588 6563 -19 3 609 342 0 0 0 chr13 3266744 3266782 -117017530 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 609 3279 73 2 2 chr13 3267502 3267898 -117016414 - MTA_Mm LTR MaLR 0 396 1 3 609 336 314 34 62 chr13 3268836 3268982 -117015330 + B4 SINE B4 11 152 -140 3 609 216 274 0 0 chr13 3270493 3270544 -117013768 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 609 339 329 40 13 chr13 3270741 3270892 -117013420 - MER90a LTR ERV1 -207 407 253 3 609 770 151 291 0 chr13 3271145 3271317 -117012995 + URR1A DNA MER1_type 5 226 0 3 609 210 350 56 31 chr13 3271731 3271893 -117012419 + L3 LINE CR1 3638 3803 -686 3 609 1139 57 0 35 chr13 3271987 3272132 -117012180 + B1_Mm SINE Alu 2 141 -6 3 609 369 0 0 0 chr13 3272134 3272175 -117012137 + (TAA)n Simple_repeat Simple_repeat 3 43 0 3 609 436 336 90 28 chr13 3272293 3272682 -117011630 - L1MA5 LINE L1 -8 6292 5880 3 609 195 42 0 0 chr13 3272972 3272996 -117011316 + (TTG)n Simple_repeat Simple_repeat 2 25 0 3 609 939 133 20 20 chr13 3273029 3273175 -117011137 - B1_Mur4 SINE Alu -4 146 1 3 609 853 277 5 14 chr13 3273204 3273413 -117010899 - ID_B1 SINE B4 -17 207 1 3 609 324 0 0 0 chr13 3273432 3273468 -117010844 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 609 516 16 0 0 chr13 3274016 3274077 -117010235 + (GA)n Simple_repeat Simple_repeat 2 62 0 3 609 302 264 26 78 chr13 3274118 3274233 -117010079 - B4A SINE B4 0 292 184 3 609 423 361 39 44 chr13 3274591 3274970 -117009342 - LTR16D1 LTR ERVL -9 642 192 3 609 212 216 19 38 chr13 3275082 3275135 -117009177 + CT-rich Low_complexity Low_complexity 4 55 0 3 609 207 108 0 26 chr13 3276356 3276394 -117007918 + (GAAA)n Simple_repeat Simple_repeat 3 39 0 3 76 258 350 39 22 chr13 3276796 3276937 -117007375 - MIRb SINE MIR -130 146 2 3 610 673 210 48 155 chr13 3276951 3277222 -117007090 + L1MA7 LINE L1 5710 5951 -340 3 610 430 175 12 0 chr13 3277213 3277293 -117007019 + RMER1C Other Other 1111 1191 -151 3 610 480 241 6 12 chr13 3277329 3277489 -117006823 + CT-rich Low_complexity Low_complexity 1 159 0 3 610 596 222 15 15 chr13 3277489 3277626 -117006686 + RMER1C Other Other 1203 1339 -3 3 610 533 267 104 51 chr13 3277637 3277953 -117006359 + L1MA7 LINE L1 5953 6285 -6 3 610 445 256 17 0 chr13 3277976 3278093 -117006219 + ID_B1 SINE B4 96 214 -10 3 610 1565 131 4 8 chr13 3278263 3278516 -117005796 - MTC LTR MaLR -8 413 162 3 610 261 145 226 0 chr13 3278516 3278578 -117005734 + RLTR6_Mm LTR ERV1 1 76 -578 3 610 1822 112 273 66 chr13 3278623 3279092 -117005220 + RLTR6_Mm LTR ERV1 37 602 -52 3 610 601 203 76 25 chr13 3279070 3279227 -117005085 - MTC LTR MaLR -256 165 1 3 610 202 182 0 0 chr13 3280295 3280328 -117003984 + polypurine Low_complexity Low_complexity 3 35 0 3 610 462 293 134 60 chr13 3280464 3280640 -117003672 - L1MA9 LINE L1 -49 6263 6086 3 610 804 195 92 5 chr13 3280640 3280836 -117003476 - B3 SINE B2 -2 214 2 3 610 462 293 134 60 chr13 3280836 3280999 -117003313 - L1MA9 LINE L1 -227 6085 5891 3 610 726 12 0 0 chr13 3280999 3281082 -117003230 + (TTC)n Simple_repeat Simple_repeat 3 85 0 3 610 462 293 134 60 chr13 3281082 3281150 -117003162 - L1MA9 LINE L1 -422 5890 5823 3 610 303 28 0 0 chr13 3281150 3281186 -117003126 + (TTTCC)n Simple_repeat Simple_repeat 3 38 0 3 610 820 320 43 0 chr13 3281256 3281534 -117002778 - B4A SINE B4 -2 290 1 3 610 268 205 1 40 chr13 3281535 3281624 -117002688 - L1MA9 LINE L1 -483 5829 5746 3 610 1204 228 89 12 chr13 3281643 3281980 -117002332 - ORR1D1 LTR MaLR -8 366 4 3 610 812 290 128 78 chr13 3281989 3283200 -117001112 - L1MA9 LINE L1 -428 5728 4445 3 610 1136 68 7 0 chr13 3283200 3283346 -117000966 + B1_Mus2 SINE Alu 1 147 0 3 610 584 299 124 92 chr13 3283346 3283450 -117000862 - L1MA9 LINE L1 -1696 4444 4366 3 610 446 263 9 9 chr13 3284368 3284483 -116999829 - B3A SINE B2 -83 115 1 3 610 265 253 89 0 chr13 3284483 3284562 -116999750 - L1MC LINE L1 -1933 4213 4128 3 610 4901 55 18 2 chr13 3285220 3285843 -116998469 + L1Md_F2 LINE L1 5947 6579 -3 3 610 198 209 0 0 chr13 3285874 3285917 -116998395 + A-rich Low_complexity Low_complexity 1 43 0 3 610 189 0 0 0 chr13 3286020 3286041 -116998271 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 610 489 34 0 0 chr13 3286142 3286201 -116998111 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 610 213 132 26 0 chr13 3287887 3287925 -116996387 + A-rich Low_complexity Low_complexity 3 41 0 3 610 279 0 0 0 chr13 3288298 3288329 -116995983 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 610 3433 50 28 7 chr13 3288600 3289027 -116995285 - RLTR10C LTR ERVK 0 436 1 3 610 252 0 0 0 chr13 3289544 3289572 -116994740 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 610 29 28 0 0 chr13 3289714 3289750 -116994562 + AT_rich Low_complexity Low_complexity 1 36 0 3 610 1156 206 13 24 chr13 3290243 3290541 -116993771 + L1VL1 LINE L1 1 295 -6127 3 610 32958 84 3 6 chr13 3290529 3296236 -116988076 + L1Md_F2 LINE L1 98 5586 -297 3 610 8352 37 5 0 chr13 3296237 3297227 -116987085 + L1Md_F2 LINE L1 5588 6582 0 3 610 24 53 0 0 chr13 3297349 3297387 -116986925 + AT_rich Low_complexity Low_complexity 1 38 0 3 610 232 196 0 56 chr13 3297438 3297478 -116986834 - B3A SINE B2 -68 130 94 3 610 1281 186 82 56 chr13 3297478 3297671 -116986641 + RMER17C LTR ERVK 1 179 -231 3 610 621 49 0 0 chr13 3297671 3297752 -116986560 + (TCTCCC)n Simple_repeat Simple_repeat 6 86 0 3 610 1281 186 82 56 chr13 3297752 3297950 -116986362 + RMER17C LTR ERVK 180 402 -8 3 610 383 217 43 0 chr13 3297955 3298047 -116986265 - B3A SINE B2 -101 97 2 3 610 516 72 0 0 chr13 3299003 3299072 -116985240 + (GAAAA)n Simple_repeat Simple_repeat 4 72 0 3 610 896 213 69 146 chr13 3299661 3300148 -116984164 - ORR1C2 LTR MaLR 0 394 6 3 610 259 250 193 83 chr13 3300151 3300260 -116984052 - ID_B1 SINE B4 -20 204 84 3 610 297 0 0 0 chr13 3300281 3300314 -116983998 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 610 425 294 36 7 chr13 3300325 3300462 -116983850 - B3A SINE B2 -26 172 32 3 610 5098 179 50 20 chr13 3300500 3301130 -116983182 - L1_Mur2 LINE L1 -3171 2706 2052 3 610 342 0 0 0 chr13 3301130 3301168 -116983144 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 610 5098 179 50 20 chr13 3301168 3301627 -116982685 - L1_Mur2 LINE L1 -3826 2051 1585 3 610 2347 219 54 4 chr13 3301776 3302276 -116982036 + Lx5 LINE L1 6477 7001 -49 3 610 4214 66 14 10 chr13 3302276 3302873 -116981439 + RLTR13B1 LTR ERVK 328 893 0 3 610 453 235 77 43 chr13 3302873 3303073 -116981239 - L1M3b LINE L1 -3228 3122 2930 3 610 588 260 47 8 chr13 3303272 3303400 -116980912 - ETnERV2-int LTR ERVK -204 7202 7070 3 610 372 270 67 33 chr13 3303431 3303611 -116980701 - B2_Mm2 SINE B2 -8 187 2 3 610 516 250 152 83 chr13 3303728 3304064 -116980248 - L1M3b LINE L1 -5922 359 1 3 610 3806 29 60 0 chr13 3304082 3304530 -116979782 + MT2C_Mm LTR ERVL 1 475 0 3 610 441 0 0 0 chr13 3305055 3305104 -116979208 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 3 610 187 398 34 0 chr13 3305577 3305665 -116978647 + MIR SINE MIR 20 110 -152 3 610 566 337 6 12 chr13 3305767 3305932 -116978380 + RSINE1 SINE B4 2 165 0 3 610 1418 75 21 0 chr13 3306187 3306373 -116977939 + B2_Mm1t SINE B2 1 190 -3 3 610 2239 15 114 0 chr13 3307059 3307321 -116976991 + RLTR10B LTR ERVK 1 292 0 3 610 264 59 0 0 chr13 3307574 3307608 -116976704 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 610 759 181 0 21 chr13 3307623 3307764 -116976548 - B1_Mus1 SINE Alu -2 146 9 3 610 530 250 14 28 chr13 3307792 3307936 -116976376 - B3 SINE B2 -5 211 70 3 610 185 295 92 37 chr13 3308606 3308715 -116975597 + L2a LINE L2 3308 3422 -4 3 610 254 242 30 15 chr13 3308864 3308931 -116975381 - ID4 SINE ID -13 70 3 3 610 731 242 5 58 chr13 3309152 3309341 -116974971 - Lx6 LINE L1 -606 6854 6676 3 610 370 271 28 18 chr13 3309341 3309450 -116974862 - B4A SINE B4 -182 110 1 3 610 362 293 200 0 chr13 3309746 3309886 -116974426 + B4A SINE B4 43 210 -82 3 610 1104 103 0 0 chr13 3309887 3310033 -116974279 + B1_Mus1 SINE Alu 3 148 0 3 610 1212 103 42 21 chr13 3310050 3310239 -116974073 + B2_Mm2 SINE B2 3 195 0 3 610 536 294 25 6 chr13 3310263 3310424 -116973888 + RSINE1 SINE B4 2 165 0 3 610 204 125 0 0 chr13 3310444 3310476 -116973836 + (ATG)n Simple_repeat Simple_repeat 1 32 0 3 610 204 200 0 0 chr13 3310726 3310761 -116973551 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 610 1147 147 22 5 chr13 3311293 3311478 -116972834 + B2_Mm2 SINE B2 2 189 -6 3 610 276 183 39 78 chr13 3311585 3311662 -116972650 + MT2B2 LTR ERVL 168 241 -343 3 610 529 175 165 8 chr13 3311595 3311716 -116972596 + B1F SINE Alu 10 149 0 3 610 1447 183 87 50 chr13 3311740 3312119 -116972193 + RLTR9C LTR ERVK 1 393 0 3 610 995 225 9 0 chr13 3312736 3312949 -116971363 - B3 SINE B2 0 216 2 3 610 793 271 73 8 chr13 3313155 3313415 -116970897 - B4A SINE B4 -12 280 4 4 610 219 305 181 0 chr13 3313487 3313592 -116970720 + MER5A DNA MER1_type 62 185 -4 4 610 664 240 20 0 chr13 3313633 3313779 -116970533 - B1_Mur1 SINE Alu 0 149 1 4 610 1254 137 14 0 chr13 3314641 3314853 -116969459 + URR1B DNA MER1_type 7 221 -4 4 610 498 249 130 125 chr13 3315629 3316006 -116968306 + MTEa LTR MaLR 1 379 0 4 610 1035 218 15 0 chr13 3316044 3316246 -116968066 + B3 SINE B2 1 205 -11 4 610 29 0 0 0 chr13 3316246 3316275 -116968037 + AT_rich Low_complexity Low_complexity 1 29 0 4 610 399 256 35 49 chr13 3316437 3316581 -116967731 - B1F SINE Alu -2 147 6 4 610 798 11 0 0 chr13 3316750 3316841 -116967471 + (TTC)n Simple_repeat Simple_repeat 3 93 0 4 610 736 148 99 49 chr13 3317623 3317765 -116966547 + B1_Mur3 SINE Alu 1 149 0 4 610 3105 84 17 0 chr13 3317842 3318246 -116966066 + RLTR10A LTR ERVK 1 411 0 4 610 1067 109 0 0 chr13 3318648 3318795 -116965517 + B1_Mus2 SINE Alu 1 147 0 4 610 308 309 0 0 chr13 3318849 3318930 -116965382 + (TG)n Simple_repeat Simple_repeat 1 81 0 4 610 364 281 131 66 chr13 3318941 3319215 -116965097 - B4A SINE B4 0 292 1 4 610 1171 81 0 0 chr13 3320496 3320644 -116963668 - B1_Mus1 SINE Alu 0 148 1 4 610 481 302 78 16 chr13 3321046 3321238 -116963074 + B4A SINE B4 30 233 -59 4 610 2293 81 0 50 chr13 3321295 3321634 -116962678 + RLTRETN_Mm LTR ERVK 1 322 0 4 610 360 0 0 0 chr13 3321636 3321676 -116962636 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 610 183 184 0 0 chr13 3322380 3322418 -116961894 + GA-rich Low_complexity Low_complexity 3 40 0 4 610 391 242 127 58 chr13 3322584 3322773 -116961539 - MIR SINE MIR -25 237 36 4 610 1174 54 7 0 chr13 3322870 3323017 -116961295 - B1_Mus1 SINE Alu 0 148 1 4 610 3166 54 7 33 chr13 3323250 3323670 -116960642 - RLTR10A LTR ERVK -2 409 1 4 610 5481 75 8 4 chr13 3323670 3324380 -116959932 - RLTR10-int LTR ERVK -1 1986 1274 4 610 6328 308 52 53 chr13 3324424 3328522 -116955790 - IAP-d-int LTR ERVK -1148 5394 1322 4 610 3177 42 3 5 chr13 3328522 3328908 -116955404 - L1Md_F2 LINE L1 0 6582 6198 4 610 6328 308 52 53 chr13 3328908 3329391 -116954921 - IAP-d-int LTR ERVK -5221 1321 822 4 610 1045 145 21 38 chr13 3329531 3329717 -116954595 - RLTR10-int LTR ERVK -995 992 810 4 610 1250 83 0 12 chr13 3330175 3330345 -116953967 - RLTR10-int LTR ERVK -1438 549 382 4 610 2454 83 0 6 chr13 3330351 3330690 -116953622 - IAPLTR4 LTR ERVK -8 337 1 4 610 6112 244 40 34 chr13 3330690 3333214 -116951098 - IAPLTR3-int LTR ERVK -383 7297 5064 4 610 449 76 30 15 chr13 3333350 3333417 -116950895 - IAPLTR3-int LTR ERVK -2932 4649 4582 4 610 337 27 0 0 chr13 3333417 3333454 -116950858 + L1Md_T LINE L1 5550 5586 -297 4 610 8591 32 2 0 chr13 3333454 3334448 -116949864 + L1Md_T LINE L1 5587 6582 0 4 610 449 100 0 0 chr13 3334453 3334513 -116949799 - IAPLTR3-int LTR ERVK -2992 4589 4530 4 610 367 212 27 3 chr13 3334525 3334624 -116949688 - IAPLTR3-int LTR ERVK -2380 2464 2378 4 610 207 0 0 0 chr13 3334624 3334647 -116949665 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 4 610 6629 122 44 18 chr13 3334662 3336069 -116948243 - ETnERV3-int LTR ERVK -3135 4271 2732 4 610 351 256 0 55 chr13 3336078 3336169 -116948143 - ETnERV3-int LTR ERVK -4867 2539 2454 4 610 484 212 88 0 chr13 3336182 3336295 -116948017 - RMER16-int LTR ERVK -5077 1060 938 4 610 1387 207 100 104 chr13 3336282 3336828 -116947484 - RMER16-int LTR ERVK -5449 688 221 4 610 488 139 10 107 chr13 3336939 3337179 -116947133 - IAPLTR3-int LTR ERVK -5867 954 824 4 610 473 204 34 34 chr13 3337179 3337296 -116947016 - IAPLTR3-int LTR ERVK -6704 117 1 4 610 2475 87 5 10 chr13 3337302 3337677 -116946635 - IAPLTR4 LTR ERVK -8 337 1 4 610 381 21 0 59 chr13 3337677 3337728 -116946584 - RLTR10-int LTR ERVK -1636 351 304 4 610 2886 63 2 122 chr13 3337730 3337869 -116946443 - RLTR10A LTR ERVK 0 411 302 4 610 1277 20 0 0 chr13 3337869 3338015 -116946297 - B1_Mm SINE Alu 0 147 2 4 610 2886 63 2 122 chr13 3338015 3338342 -116945970 - RLTR10A LTR ERVK -110 301 1 4 610 338 301 83 29 chr13 3338449 3338654 -116945658 - L2a LINE L2 0 3426 3211 4 610 331 308 30 15 chr13 3338842 3338974 -116945338 - L2a LINE L2 -309 3117 2984 4 610 1205 247 157 6 chr13 3339567 3339930 -116944382 + MTD LTR MaLR 1 418 -1 4 610 251 320 46 15 chr13 3339991 3340121 -116944191 - L2a LINE L2 -1898 1521 1388 4 610 249 241 0 0 chr13 3340301 3340359 -116943953 + ID2 SINE ID 2 59 -24 4 610 2228 127 67 8 chr13 3341616 3342006 -116942306 + MTC LTR MaLR 1 413 -8 4 610 982 109 7 0 chr13 3346968 3347106 -116937206 + IAPEz-int LTR ERVK 321 459 -6022 4 610 261 0 0 0 chr13 3347226 3347255 -116937057 + (A)n Simple_repeat Simple_repeat 1 29 0 4 610 754 98 0 36 chr13 3347255 3347392 -116936920 - BC1_Mm scRNA scRNA -20 132 1 4 610 2127 51 30 20 chr13 3347636 3347937 -116936375 + IAPLTR2b LTR ERVK 1 304 -23 4 610 572 138 197 61 chr13 3347951 3348098 -116936214 + IAPLTR4_I LTR ERVK 14 180 -1290 4 610 4093 100 61 7 chr13 3348097 3348701 -116935611 + IAPLTR4_I LTR ERVK 546 1182 -288 4 610 393 88 0 0 chr13 3348701 3348758 -116935554 + B1_Mus1 SINE Alu 1 57 -91 4 610 1936 63 4 0 chr13 3348763 3349002 -116935310 + IAPEY3-int LTR ERVK 2258 2497 -5183 4 610 8356 225 20 26 chr13 3348997 3350906 -116933406 + IAPLTR3-int LTR ERVK 4904 6801 -20 4 610 2151 65 23 3 chr13 3350906 3351216 -116933096 + IAPLTR2b LTR ERVK 1 316 -11 4 610 21 36 0 0 chr13 3351317 3351345 -116932967 + AT_rich Low_complexity Low_complexity 1 28 0 4 610 22 0 0 0 chr13 3351685 3351707 -116932605 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 387 224 45 36 chr13 3353277 3353388 -116930924 + PB1D9 SINE Alu 9 120 0 4 610 359 269 90 9 chr13 3353625 3353786 -116930526 + MIRb SINE MIR 18 187 -75 4 610 270 228 0 0 chr13 3354718 3354775 -116929537 + B4A SINE B4 22 78 -214 4 610 725 199 6 0 chr13 3354776 3354937 -116929375 + (CA)n Simple_repeat Simple_repeat 2 163 0 4 610 726 43 0 0 chr13 3355691 3355785 -116928527 + (TC)n Simple_repeat Simple_repeat 2 95 0 4 610 43 35 0 0 chr13 3356227 3356284 -116928028 + AT_rich Low_complexity Low_complexity 1 57 0 4 610 22 56 0 0 chr13 3356608 3356644 -116927668 + AT_rich Low_complexity Low_complexity 1 36 0 4 610 261 0 0 0 chr13 3358662 3358691 -116925621 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 610 292 227 40 0 chr13 3361180 3361255 -116923057 + PB1D10 SINE Alu 34 111 -6 4 610 326 25 71 59 chr13 3361902 3361987 -116922325 + (TTTG)n Simple_repeat Simple_repeat 3 88 0 4 610 189 0 0 0 chr13 3362018 3362039 -116922273 + (T)n Simple_repeat Simple_repeat 1 21 0 4 610 1113 75 7 0 chr13 3362039 3362185 -116922127 - B1_Mm SINE Alu 0 147 1 4 610 192 40 0 0 chr13 3362404 3362429 -116921883 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 4 610 4753 62 3 0 chr13 3362526 3363111 -116921201 + LTRIS_Mus LTR ERV1 1 587 0 4 610 1574 175 159 21 chr13 3363647 3364068 -116920244 - RMER15 LTR ERVL -96 479 1 4 610 1649 27 0 0 chr13 3364435 3364619 -116919693 - B2_Mm1a SINE B2 -6 187 4 4 610 432 0 0 0 chr13 3365207 3365255 -116919057 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 4 610 617 215 46 0 chr13 3365260 3365390 -116918922 - B1_Mus1 SINE Alu -12 136 1 4 610 183 80 0 0 chr13 3365396 3365421 -116918891 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 4 610 448 229 59 0 chr13 3365463 3365581 -116918731 + ID_B1 SINE B4 81 205 -19 4 610 1272 27 0 0 chr13 3366230 3366377 -116917935 - B1_Mm SINE Alu 0 147 1 4 610 24 0 0 0 chr13 3366448 3366472 -116917840 + AT_rich Low_complexity Low_complexity 1 24 0 4 610 416 175 0 12 chr13 3367360 3367441 -116916871 - B3 SINE B2 -108 108 29 4 610 307 287 51 25 chr13 3368369 3368487 -116915825 + MIR SINE MIR 27 147 -61 4 610 270 230 0 90 chr13 3369006 3369073 -116915239 - RSINE1 SINE B4 -68 97 37 4 610 653 306 19 15 chr13 3369535 3369741 -116914571 - B3 SINE B2 -9 207 1 4 610 514 240 70 45 chr13 3370252 3370409 -116913903 + ID_B1 SINE B4 49 209 -15 4 610 223 93 0 44 chr13 3371702 3371747 -116912565 + (CCCTAA)n Simple_repeat Simple_repeat 3 45 0 4 610 1584 163 3 90 chr13 3371784 3372149 -116912163 - RLTR33 LTR ERVK -345 333 1 4 610 215 132 127 36 chr13 3372476 3372531 -116911781 - B1_Mur4 SINE Alu -61 89 30 4 610 949 131 0 0 chr13 3372531 3372668 -116911644 - B1_Mus1 SINE Alu -10 138 2 4 610 363 78 0 0 chr13 3373029 3373080 -116911232 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 610 180 97 0 0 chr13 3373157 3373188 -116911124 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 4 610 646 161 160 8 chr13 3373219 3373344 -116910968 + B1_Mus1 SINE Alu 5 148 0 4 610 500 81 14 0 chr13 3373352 3373426 -116910886 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 4 610 59 48 0 9 chr13 3373433 3373452 -116910860 + AT_rich Low_complexity Low_complexity 1 19 0 4 610 988 137 0 0 chr13 3373452 3373598 -116910714 + B1_Mus1 SINE Alu 3 148 0 4 610 59 48 0 9 chr13 3373598 3373683 -116910629 + AT_rich Low_complexity Low_complexity 1 85 0 4 610 268 287 21 21 chr13 3373746 3373842 -116910470 + L1_Rod LINE L1 3880 3975 -1872 4 610 356 185 16 115 chr13 3373855 3373977 -116910335 - B1_Mur3 SINE Alu 0 149 40 4 610 327 49 0 0 chr13 3374010 3374051 -116910261 + (TTC)n Simple_repeat Simple_repeat 1 41 0 4 610 222 37 0 0 chr13 3374082 3374109 -116910203 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 610 505 183 0 37 chr13 3374223 3374331 -116909981 + RLTR11A2 LTR ERVK 371 474 -53 4 610 22 0 0 0 chr13 3374530 3374552 -116909760 + AT_rich Low_complexity Low_complexity 1 22 0 4 610 624 101 21 3 chr13 3375008 3375115 -116909197 + B1_Mus1 SINE Alu 2 120 0 4 610 230 257 43 0 chr13 3375159 3375229 -116909083 + B1_Mm SINE Alu 40 112 -35 4 610 450 239 64 0 chr13 3376144 3376253 -116908059 + B1_Mm SINE Alu 31 146 -1 4 610 4922 51 2 0 chr13 3376511 3377097 -116907215 - LTRIS_Mus LTR ERV1 0 587 1 4 610 453 279 121 6 chr13 3377103 3377269 -116907043 + B3 SINE B2 9 193 -23 4 610 1118 55 14 20 chr13 3377315 3377463 -116906849 + B1_Mus1 SINE Alu 2 148 0 4 610 845 19 10 0 chr13 3377481 3377584 -116906728 + (GAA)n Simple_repeat Simple_repeat 2 105 0 4 610 229 323 65 108 chr13 3377744 3377883 -116906429 + B1_Mur3 SINE Alu 1 133 -16 4 610 1071 88 0 7 chr13 3377915 3378063 -116906249 + B1_Mm SINE Alu 1 147 0 4 610 899 136 161 0 chr13 3378072 3378227 -116906085 - B2_Mm2 SINE B2 -14 181 2 5 610 228 67 0 0 chr13 3378322 3378352 -116905960 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 5 610 2900 45 0 0 chr13 3378358 3378690 -116905622 + IAPEY3_LTR LTR ERVK 1 332 0 5 610 30664 74 28 12 chr13 3378690 3382709 -116901603 + IAPEY3-int LTR ERVK 1 4084 -3596 5 610 3548 40 28 12 chr13 3382709 3383138 -116901174 + RLTR10C LTR ERVK 1 436 0 5 610 2084 61 11 4 chr13 3383138 3383403 -116900909 + MMERVK10C-int LTR ERVK 1 267 -7314 5 610 277 116 67 44 chr13 3383484 3383574 -116900738 + GA-rich Low_complexity Low_complexity 3 94 0 5 610 366 67 0 0 chr13 3383574 3383619 -116900693 + MMERVK10C-int LTR ERVK 93 137 -6405 5 610 1994 40 0 2 chr13 3383622 3384057 -116900255 + MMERVK10C-int LTR ERVK 652 887 -1100 5 610 8792 43 1 0 chr13 3384050 3385070 -116899242 + MMERVK10C-int LTR ERVK 4790 5810 -1771 5 610 1862 37 0 0 chr13 3385061 3385275 -116899037 + MMERVK10C-int LTR ERVK 6651 6864 -717 5 610 849 40 0 0 chr13 3385275 3385375 -116898937 + MMERVK10C-int LTR ERVK 7482 7581 0 5 610 856 27 0 26 chr13 3385375 3385489 -116898823 + RLTR10C LTR ERVK 1 111 -325 5 610 5770 45 0 69 chr13 3385489 3386259 -116898053 + MMERVK10C-int LTR ERVK 6865 7581 0 5 610 3589 40 28 7 chr13 3386259 3386686 -116897626 + RLTR10C LTR ERVK 1 436 0 5 610 22220 44 26 1 chr13 3386686 3390197 -116894115 + IAPEY3-int LTR ERVK 4079 7680 0 5 610 2741 63 3 0 chr13 3390197 3390528 -116893784 + IAPEY3_LTR LTR ERVK 1 332 0 5 610 940 107 50 7 chr13 3390559 3390700 -116893612 - B1_Mus1 SINE Alu 0 148 2 5 610 7939 68 1 1 chr13 3390779 3392711 -116891601 + L1Md_F2 LINE L1 371 2300 -3583 5 610 3747 55 21 4 chr13 3392711 3393185 -116891127 + RLTR45 LTR ERVK 1 482 0 5 610 9981 67 25 16 chr13 3393185 3393745 -116890567 + RLTR45-int LTR ERVK 1 580 -6664 5 610 1235 48 0 0 chr13 3393745 3393892 -116890420 + B1_Mus2 SINE Alu 1 147 0 5 610 42574 38 39 7 chr13 3393892 3397951 -116886361 + RLTR45-int LTR ERVK 581 4745 -2499 5 610 231 36 0 0 chr13 3397951 3397979 -116886333 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 5 610 42574 33 33 4 chr13 3397979 3400399 -116883913 + RLTR45-int LTR ERVK 4746 7244 0 5 610 3631 55 27 19 chr13 3400399 3400877 -116883435 + RLTR45 LTR ERVK 1 482 0 5 610 25441 71 1 1 chr13 3400877 3404168 -116880144 + L1Md_F2 LINE L1 2295 5586 -297 5 610 8626 33 0 0 chr13 3404168 3405164 -116879148 + L1Md_F2 LINE L1 5587 6582 0 5 610 618 171 45 23 chr13 3405186 3405318 -116878994 - B2_Mm2 SINE B2 -55 140 6 5 610 283 253 50 40 chr13 3405507 3405606 -116878706 - B1_Mur1 SINE Alu -41 108 9 5 610 249 135 0 0 chr13 3406166 3406218 -116878094 + (T)n Simple_repeat Simple_repeat 1 52 0 5 610 1118 95 0 0 chr13 3406220 3406367 -116877945 - B1_Mus1 SINE Alu 0 148 2 5 610 254 50 0 24 chr13 3406404 3406445 -116877867 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 5 610 1128 89 0 0 chr13 3406466 3406612 -116877700 - B1_Mm SINE Alu -1 146 1 5 610 293 300 38 0 chr13 3407212 3407292 -116877020 + RSINE1 SINE B4 7 89 -76 5 76 5160 176 35 46 chr13 3407727 3409124 -116875188 - L1_Mur3 LINE L1 -3531 2349 974 5 611 5965 92 14 55 chr13 3409125 3409714 -116874598 + RLTR22_Mur LTR ERVK 1 573 -1275 5 611 1374 77 11 0 chr13 3409714 3409897 -116874415 + B2_Mm1t SINE B2 2 186 -7 5 611 5965 92 14 55 chr13 3409897 3410321 -116873991 + RLTR22_Mur LTR ERVK 574 968 -880 5 611 977 104 0 0 chr13 3410321 3410455 -116873857 + B1_Mus2 SINE Alu 1 134 -13 5 611 234 62 0 0 chr13 3410455 3410487 -116873825 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 611 768 106 9 0 chr13 3410487 3410600 -116873712 - RLTR11A LTR ERVK -389 139 26 5 611 329 241 23 0 chr13 3410617 3410704 -116873608 + MYSERV16_I-int LTR ERVK 808 896 -1430 5 611 228 279 31 41 chr13 3410704 3410801 -116873511 + RMER4A LTR ERVK 287 382 -84 5 611 3677 143 50 9 chr13 3410807 3411944 -116872368 + MYSERV16_I-int LTR ERVK 1000 2183 -143 5 611 471 18 0 0 chr13 3411956 3412012 -116872300 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 611 1001 211 17 22 chr13 3412057 3412289 -116872023 + BGLII_B LTR ERVK 211 441 0 5 611 768 282 14 5 chr13 3412289 3412510 -116871802 - L1_Mur3 LINE L1 -7442 286 64 5 611 186 26 0 95 chr13 3412538 3412580 -116871732 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 5 611 643 203 2 0 chr13 3412753 3412882 -116871430 - B1_Mus1 SINE Alu -16 132 3 5 611 4696 159 43 69 chr13 3413050 3413976 -116870336 + RMER19B LTR ERVK 1 902 0 5 611 539 176 78 0 chr13 3414004 3414106 -116870206 - B1_Mur2 SINE Alu -34 115 6 5 611 5389 183 48 124 chr13 3414539 3414732 -116869580 - RLTR21 LTR ERVK 0 1572 1389 5 611 1249 48 0 0 chr13 3414732 3414879 -116869433 + B1_Mus1 SINE Alu 2 148 0 5 611 5389 183 48 124 chr13 3414879 3414973 -116869339 - RLTR21 LTR ERVK -184 1388 1305 5 611 309 26 0 0 chr13 3414973 3415011 -116869301 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 611 5389 183 48 124 chr13 3415011 3416424 -116867888 - RLTR21 LTR ERVK -268 1304 1 5 611 414 53 0 0 chr13 3416646 3416703 -116867609 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 611 556 212 9 0 chr13 3417577 3417690 -116866622 + Lx9 LINE L1 7023 7136 -508 5 611 22 35 0 0 chr13 3417697 3417726 -116866586 + AT_rich Low_complexity Low_complexity 1 29 0 5 611 327 196 116 0 chr13 3417733 3417845 -116866467 + Lx9 LINE L1 7518 7642 -2 5 611 882 0 0 0 chr13 3418640 3418738 -116865574 + (GGGAGA)n Simple_repeat Simple_repeat 1 98 0 5 611 1840 60 130 5 chr13 3418738 3419154 -116865158 - RLTR1B LTR ERV1 -44 468 1 5 611 3209 40 0 0 chr13 3419154 3419532 -116864780 - MMERGLN-int LTR ERV1 0 7556 7179 5 611 1320 143 134 14 chr13 3419532 3419822 -116864490 + IAPLTR4 LTR ERVK 1 325 -20 5 611 11957 50 17 13 chr13 3419822 3421367 -116862945 + IAPLTR4_I LTR ERVK 5 1470 0 5 611 1469 185 103 47 chr13 3421479 3421859 -116862453 + ETnERV2-int LTR ERVK 251 651 -4755 5 611 288 261 67 22 chr13 3421872 3421962 -116862350 + ETnERV2-int LTR ERVK 727 820 -4586 5 611 464 164 100 0 chr13 3422000 3422110 -116862202 + ETnERV2-int LTR ERVK 1729 1849 -5557 5 611 660 231 392 38 chr13 3422121 3422343 -116861969 + ETnERV2-int LTR ERVK 2454 2753 -4653 5 611 3213 146 154 21 chr13 3422369 3422696 -116861616 + ETnERV2-int LTR ERVK 3567 3884 -3522 5 611 1521 50 16 0 chr13 3422696 3422878 -116861434 - B2_Mm1a SINE B2 -7 186 2 5 611 3213 146 154 21 chr13 3422878 3423172 -116861140 + ETnERV2-int LTR ERVK 3885 4271 -3135 5 611 448 195 21 35 chr13 3423177 3423301 -116861011 + MMETn-int LTR ERVK 2357 2464 -2380 5 611 6779 234 42 34 chr13 3423368 3426392 -116857920 + IAPEY3-int LTR ERVK 4556 7329 -351 5 611 1260 153 134 14 chr13 3426392 3426683 -116857629 + IAPLTR4 LTR ERVK 1 326 -19 5 611 17404 58 5 1 chr13 3426693 3428786 -116855526 - MMERGLN-int LTR ERV1 -370 7186 5086 5 611 30644 55 6 10 chr13 3428776 3429487 -116854825 - MMERGLN-int LTR ERV1 -3547 4009 3305 5 611 3071 60 27 7 chr13 3429487 3429890 -116854422 - RLTR10A LTR ERVK 0 411 1 5 611 30644 55 6 10 chr13 3429890 3431205 -116853107 - MMERGLN-int LTR ERV1 -4252 3304 1996 5 611 1836 112 24 63 chr13 3431205 3431540 -116852772 + RLTRETN_Mm LTR ERVK 1 322 0 5 611 30644 55 6 10 chr13 3431540 3433255 -116851057 - MMERGLN-int LTR ERV1 -5561 1995 283 5 611 2959 54 3 11 chr13 3433255 3433627 -116850685 - MMERGLN-int LTR ERV1 -7187 369 1 5 611 3260 79 117 9 chr13 3433627 3434089 -116850223 - RLTR1B LTR ERV1 0 512 1 5 611 368 192 47 19 chr13 3434089 3434195 -116850117 - RLTR11A2 LTR ERVK -211 316 208 5 611 22 0 0 0 chr13 3434482 3434504 -116849808 + AT_rich Low_complexity Low_complexity 1 22 0 5 611 370 349 83 44 chr13 3434891 3435119 -116849193 - MLT1E2 LTR MaLR -341 286 50 5 611 474 210 8 46 chr13 3435149 3435279 -116849033 - RLTR9A LTR ERVK 0 368 244 5 611 1169 75 0 0 chr13 3435280 3435426 -116848886 + B1_Mus2 SINE Alu 2 147 0 5 611 183 114 0 0 chr13 3435428 3435463 -116848849 + (A)n Simple_repeat Simple_repeat 1 35 0 5 611 227 209 0 0 chr13 3435860 3435903 -116848409 - MER20 DNA MER1_type 0 219 177 5 611 803 342 51 24 chr13 3435906 3436241 -116848071 + MER45B DNA Tip100 3 346 -694 5 611 1051 206 5 5 chr13 3436247 3436462 -116847850 - URR1B DNA MER1_type -6 219 5 5 611 1074 173 88 58 chr13 3436471 3436711 -116847601 + RLTR11A LTR ERVK 1 247 -281 5 611 239 200 16 48 chr13 3436743 3436790 -116847522 - MTEb LTR MaLR -58 321 277 5 611 2892 185 29 5 chr13 3436790 3437345 -116846967 - RMER15 LTR ERVL -2 573 6 5 611 981 220 98 20 chr13 3437355 3437610 -116846702 - MTEb LTR MaLR -104 275 1 5 611 1095 69 0 0 chr13 3438250 3438395 -116845917 + (TCTA)n Simple_repeat Simple_repeat 4 148 0 5 611 1079 95 0 0 chr13 3439835 3439983 -116844329 + B1_Mus1 SINE Alu 1 148 0 5 611 1011 161 0 0 chr13 3439986 3440166 -116844146 + GA-rich Low_complexity Low_complexity 1 180 0 5 611 2139 159 21 12 chr13 3440361 3440779 -116843533 - RLTR11A LTR ERVK 0 528 107 5 611 543 224 12 42 chr13 3440779 3440947 -116843365 - RNLTR23 LTR ERVK 0 642 480 5 611 625 132 38 0 chr13 3441210 3441316 -116842996 - RLTR11A LTR ERVK -416 112 3 5 611 1647 254 28 0 chr13 3441317 3441706 -116842606 + Lx5 LINE L1 6648 7047 -3 5 611 233 260 13 13 chr13 3442494 3442572 -116841740 - ORR1E LTR MaLR -13 406 329 5 611 1083 95 0 26 chr13 3442577 3442729 -116841583 + B1_Mus1 SINE Alu 1 148 0 5 611 860 213 166 45 chr13 3442768 3442805 -116841507 + L1_Rod LINE L1 1412 1447 -4400 5 611 261 0 0 0 chr13 3442805 3442834 -116841478 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 611 1040 197 180 46 chr13 3442834 3443494 -116840818 + L1_Rod LINE L1 1448 2202 -3645 5 611 1041 96 0 0 chr13 3443513 3443648 -116840664 + B1_Mus2 SINE Alu 1 135 -12 5 611 207 0 0 0 chr13 3443650 3443673 -116840639 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 611 1757 215 21 8 chr13 3443864 3444239 -116840073 - RLTR14 LTR ERV1 0 382 3 5 611 888 194 5 16 chr13 3444262 3444456 -116839856 - RLTR14-int LTR ERV1 -3 5314 5123 5 611 265 264 72 18 chr13 3444456 3444622 -116839690 + RMER17A2 LTR ERVK 253 427 -479 5 611 411 296 48 8 chr13 3444627 3444753 -116839559 - ORR1E LTR MaLR -226 133 3 5 611 207 100 0 0 chr13 3445174 3445204 -116839108 + (CCCTAA)n Simple_repeat Simple_repeat 4 33 0 5 611 2524 117 18 2 chr13 3445204 3445600 -116838712 - MurERV4_19-int LTR ERVK -3527 2253 1852 5 611 3942 145 26 41 chr13 3445599 3446353 -116837959 - RLTR14-int LTR ERV1 -778 4539 3797 5 611 2207 175 36 8 chr13 3446361 3446753 -116837559 + MTC LTR MaLR 9 411 -10 5 611 23 33 0 0 chr13 3448028 3448058 -116836254 + AT_rich Low_complexity Low_complexity 1 30 0 5 611 23 0 0 0 chr13 3448140 3448163 -116836149 + AT_rich Low_complexity Low_complexity 1 23 0 5 611 1623 135 9 78 chr13 3448404 3448750 -116835562 - RLTRETN_Mm LTR ERVK 0 322 1 5 611 9421 133 19 27 chr13 3448750 3450773 -116833539 - MMETn-int LTR ERVK 0 4844 3219 5 611 22706 69 40 30 chr13 3450773 3454559 -116829753 - MMETn-int LTR ERVK -2297 5109 2 5 611 1564 144 9 78 chr13 3454560 3454906 -116829406 - RLTRETN_Mm LTR ERVK 0 322 1 5 611 544 64 0 0 chr13 3456039 3456117 -116828195 + L1_Mus3 LINE L1 6554 6631 -7 5 611 510 240 56 104 chr13 3457442 3457586 -116826726 - ID_B1 SINE B4 -12 212 76 5 611 245 29 29 0 chr13 3457818 3457852 -116826460 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 611 1175 62 7 0 chr13 3457852 3457996 -116826316 - B1_Mus2 SINE Alu -2 145 1 5 611 447 258 0 11 chr13 3458471 3458565 -116825747 + ID_B1 SINE B4 118 210 -14 5 611 283 317 57 9 chr13 3458565 3458576 -116825736 + B1F SINE Alu 37 146 -3 5 611 186 295 206 19 chr13 3458774 3458881 -116825431 - MIR3 SINE MIR -81 127 1 5 611 33 0 0 0 chr13 3459208 3459241 -116825071 + AT_rich Low_complexity Low_complexity 1 33 0 5 611 233 196 0 0 chr13 3460207 3460258 -116824054 + Lx7 LINE L1 7628 7678 -18 5 611 474 270 31 94 chr13 3460394 3460680 -116823632 + MYSERV16_I-int LTR ERVK 100 367 -2475 5 611 317 145 80 57 chr13 3460934 3461022 -116823290 + MYSERV16_I-int LTR ERVK 1022 1111 -1731 5 611 302 0 26 0 chr13 3461201 3461239 -116823073 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 611 975 75 0 43 chr13 3461241 3461364 -116822948 - B1_Mus2 SINE Alu -12 135 18 5 611 4194 58 42 7 chr13 3461364 3461905 -116822407 + LTRIS2 LTR ERV1 5 564 0 5 611 975 75 0 43 chr13 3461905 3461920 -116822392 - B1_Mus2 SINE Alu -130 17 3 5 611 326 149 53 13 chr13 3462017 3462042 -116822270 - B2_Mm1t SINE B2 -6 187 161 5 611 351 0 0 0 chr13 3462042 3462081 -116822231 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5 611 326 149 53 13 chr13 3462081 3462130 -116822182 - B2_Mm1t SINE B2 -33 160 110 5 611 4730 54 3 5 chr13 3462124 3462741 -116821571 + RLTR13A2 LTR ERVK 28 643 -315 5 611 2178 70 3 0 chr13 3462738 3463023 -116821289 + RLTR13A LTR ERVK 570 855 0 6 611 6203 117 13 10 chr13 3463043 3464646 -116819666 - Lx LINE L1 -251 6403 4796 6 611 4132 168 44 16 chr13 3464646 3465578 -116818734 + MYSERV16_I-int LTR ERVK 1316 2273 -53 5 611 2245 214 48 10 chr13 3465602 3466084 -116818228 + RLTR16 LTR ERVK 6 505 0 6 611 1107 279 124 14 chr13 3466919 3467540 -116816772 + RCHARR1 DNA MER1_type 110 816 -158 6 611 431 296 9 0 chr13 3468056 3468164 -116816148 - PB1 SINE Alu -11 116 8 6 611 457 111 83 0 chr13 3468164 3468236 -116816076 + L1Md_T LINE L1 5509 5586 -297 6 611 8423 36 0 0 chr13 3468236 3469231 -116815081 + L1Md_T LINE L1 5587 6581 -1 6 611 1066 90 26 63 chr13 3469298 3469487 -116814825 + B2_Mm2 SINE B2 14 195 0 6 611 609 258 73 17 chr13 3469855 3470089 -116814223 + RMER1B Other Other 11 233 -833 6 611 2181 248 106 53 chr13 3470149 3470681 -116813631 + RMER1C Other Other 474 1040 -302 6 611 1127 62 7 0 chr13 3470681 3470827 -116813485 + B1_Mus2 SINE Alu 1 147 0 6 611 207 0 0 0 chr13 3470835 3470858 -116813454 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 6 611 2181 248 106 53 chr13 3470858 3471120 -116813192 + RMER1C Other Other 1046 1319 -23 6 611 546 139 33 18 chr13 3471120 3471397 -116812915 + (TCTA)n Simple_repeat Simple_repeat 1 281 0 6 611 231 370 111 10 chr13 3471516 3471715 -116812597 + L2 LINE L2 2500 2718 -701 6 611 23 0 0 0 chr13 3471718 3471741 -116812571 + AT_rich Low_complexity Low_complexity 1 23 0 6 611 417 250 35 7 chr13 3471887 3472028 -116812284 - Lx7 LINE L1 -289 7407 7263 6 611 249 352 139 8 chr13 3472128 3472247 -116812065 + L2 LINE L2 2001 2140 -1279 6 611 219 36 0 0 chr13 3472247 3472275 -116812037 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6 611 249 352 139 8 chr13 3472275 3472393 -116811919 + L2 LINE L2 2141 2269 -1150 6 611 1497 156 61 27 chr13 3472460 3472789 -116811523 + MYSERV16_I-int LTR ERVK 216 555 -1771 6 611 1223 267 40 83 chr13 3472848 3473354 -116810958 + MYSERV16_I-int LTR ERVK 516 999 -1327 6 611 2178 199 31 39 chr13 3473367 3473389 -116810923 + MYSERV16_I-int LTR ERVK 960 981 -1345 6 611 279 0 0 0 chr13 3473396 3473427 -116810885 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 611 1141 82 0 7 chr13 3473427 3473567 -116810745 - B1_Mus2 SINE Alu -7 140 1 6 611 2178 199 31 39 chr13 3473567 3473937 -116810375 + MYSERV16_I-int LTR ERVK 982 1342 -984 6 611 1111 96 0 0 chr13 3473937 3474083 -116810229 - B1_Mus1 SINE Alu -1 147 2 6 611 2178 199 31 39 chr13 3474083 3474332 -116809980 + MYSERV16_I-int LTR ERVK 1343 1596 -730 6 611 2279 183 74 24 chr13 3474375 3474874 -116809438 + RLTR11A LTR ERVK 5 528 0 6 611 220 262 0 0 chr13 3474875 3474917 -116809395 - B1_Mus2 SINE Alu -98 49 8 6 611 416 324 113 40 chr13 3475246 3475372 -116808940 + MER119 DNA MER1_type 258 380 -203 6 611 207 0 0 0 chr13 3475372 3475395 -116808917 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 611 1166 62 0 0 chr13 3475395 3475539 -116808773 - B1_Mus2 SINE Alu -3 144 1 6 611 416 324 113 40 chr13 3475539 3475713 -116808599 + MER119 DNA MER1_type 381 580 -3 6 611 265 314 107 11 chr13 3475791 3475986 -116808326 - B4A SINE B4 -70 222 2 6 611 283 340 11 0 chr13 3475993 3476087 -116808225 + L2 LINE L2 785 879 -2540 6 611 180 0 0 0 chr13 3477976 3477996 -116806316 + (CCA)n Simple_repeat Simple_repeat 2 21 0 6 611 218 232 261 0 chr13 3479072 3479141 -116805171 + MIRb SINE MIR 17 103 -165 6 611 407 243 98 49 chr13 3479433 3479576 -116804736 + ID_B1 SINE B4 72 221 -3 6 611 662 180 8 38 chr13 3479448 3479581 -116804731 + B1F2 SINE Alu 21 149 0 6 611 239 359 113 6 chr13 3479827 3479995 -116804317 + L2a LINE L2 2706 2891 -528 6 611 255 310 104 26 chr13 3480227 3480419 -116803893 + L2a LINE L2 3220 3426 0 6 611 452 289 42 15 chr13 3480430 3480615 -116803697 + MIR SINE MIR 38 229 -39 6 611 626 290 97 39 chr13 3480629 3480887 -116803425 - B4A SINE B4 -16 276 4 6 611 470 125 0 12 chr13 3480936 3481017 -116803295 + (TCC)n Simple_repeat Simple_repeat 3 82 0 6 611 498 17 0 0 chr13 3481017 3481076 -116803236 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 611 442 254 42 35 chr13 3481076 3481219 -116803093 - B1_Mur4 SINE Alu -6 144 1 6 611 266 319 137 40 chr13 3482294 3482418 -116801894 - B3A SINE B2 -62 136 1 6 611 240 309 36 0 chr13 3482949 3483033 -116801279 - BGLII_B LTR ERVK 0 441 355 6 611 376 286 43 91 chr13 3483036 3483267 -116801045 - RMER12 LTR ERVK -2 1320 1101 6 611 966 136 33 0 chr13 3483476 3483660 -116800652 - RLTR22_Mur LTR ERVK -1016 832 643 6 611 1820 76 110 0 chr13 3483645 3483893 -116800419 - RLTR22_Mus LTR ERVK -1354 454 180 6 611 531 82 0 0 chr13 3483893 3483966 -116800346 + (TA)n Simple_repeat Simple_repeat 2 74 0 6 611 1820 76 110 0 chr13 3483966 3484007 -116800305 - RLTR22_Mus LTR ERVK -1629 179 134 6 611 1097 169 40 112 chr13 3484007 3484354 -116799958 + RLTRETN_Mm LTR ERVK 1 322 0 6 611 6223 109 36 78 chr13 3484356 3484773 -116799539 + MMETn-int LTR ERVK 3 386 -4458 6 611 4389 61 11 2 chr13 3484773 3485328 -116798984 - LTRIS2 LTR ERV1 0 564 5 6 611 6223 109 36 78 chr13 3485328 3486128 -116798184 + MMETn-int LTR ERVK 387 1169 -3675 6 611 3618 149 33 30 chr13 3486126 3487379 -116796933 + MMETn-int LTR ERVK 1730 4085 -3321 6 611 1711 107 99 51 chr13 3487378 3487711 -116796601 + MMETn-int LTR ERVK 6962 7248 -158 6 611 275 216 67 22 chr13 3487711 3487801 -116796511 + RLTR13D6 LTR ERVK 347 440 -462 6 611 537 188 8 8 chr13 3487803 3487921 -116796391 + MMETn-int LTR ERVK 4700 4817 -27 6 611 1058 80 6 57 chr13 3487921 3487942 -116796370 - RLTR22_Mus LTR ERVK -1657 151 139 6 611 1248 148 34 114 chr13 3487942 3488292 -116796020 + RLTRETN_Mm LTR ERVK 1 322 0 6 611 1058 80 6 57 chr13 3488292 3488429 -116795883 - RLTR22_Mus LTR ERVK -1670 138 1 6 611 987 214 103 35 chr13 3488429 3488690 -116795622 - BGLII_B LTR ERVK -82 359 81 6 611 1155 48 7 0 chr13 3488773 3488920 -116795392 - B1_Mus1 SINE Alu 0 148 1 6 611 234 167 0 0 chr13 3489043 3489085 -116795227 - B1_Mm SINE Alu -56 91 50 6 611 195 167 0 0 chr13 3489949 3489991 -116794321 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 611 1038 96 14 88 chr13 3490347 3490564 -116793748 - Lx LINE L1 -2 6652 6452 6 611 306 0 0 0 chr13 3490967 3491001 -116793311 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 611 750 288 105 11 chr13 3491132 3491399 -116792913 - B4 SINE B4 0 292 1 6 611 1251 222 60 96 chr13 3491436 3491871 -116792441 + MT2A LTR ERVL 2 459 -74 6 611 423 0 0 0 chr13 3491888 3491935 -116792377 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 6 611 342 0 0 0 chr13 3491945 3491983 -116792329 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 611 974 263 120 25 chr13 3491983 3492299 -116792013 + Lx8 LINE L1 6348 6693 -780 6 611 493 324 33 19 chr13 3492340 3492551 -116791761 + Lx8 LINE L1 7047 7260 -213 6 611 1644 214 80 23 chr13 3492562 3492936 -116791376 - MTD LTR MaLR -8 411 19 6 611 4096 80 14 14 chr13 3492936 3493495 -116790817 + L1_Mus2 LINE L1 6008 6566 0 6 611 1644 214 80 23 chr13 3493495 3493507 -116790805 - MTD LTR MaLR -401 18 5 6 611 192 77 0 0 chr13 3493666 3493692 -116790620 + (T)n Simple_repeat Simple_repeat 1 26 0 6 611 426 69 0 0 chr13 3495565 3495623 -116788689 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 611 356 306 44 4 chr13 3495841 3495991 -116788321 - MER90a LTR ERV1 -229 385 251 6 611 239 262 224 0 chr13 3496015 3496122 -116788190 - MER90a LTR ERV1 -447 167 37 6 611 212 351 26 26 chr13 3496559 3496676 -116787636 + L3 LINE CR1 3687 3803 -686 6 611 1050 64 0 35 chr13 3496770 3496915 -116787397 + B1_Mm SINE Alu 2 141 -6 6 611 369 0 0 0 chr13 3496917 3496958 -116787354 + (TAA)n Simple_repeat Simple_repeat 3 43 0 6 611 254 345 86 23 chr13 3497079 3497465 -116786847 - L1MA5 LINE L1 -11 6289 5880 6 611 222 37 0 0 chr13 3497759 3497786 -116786526 + (TTG)n Simple_repeat Simple_repeat 2 28 0 6 611 180 111 0 0 chr13 3497787 3497814 -116786498 + (TGGGGG)n Simple_repeat Simple_repeat 1 27 0 6 611 780 196 7 20 chr13 3497819 3497965 -116786347 - B1_Mus1 SINE Alu -4 144 1 6 611 774 277 5 14 chr13 3497991 3498200 -116786112 - ID_B1 SINE B4 -17 207 1 6 611 384 22 0 0 chr13 3498219 3498264 -116786048 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 611 297 0 0 0 chr13 3498798 3498831 -116785481 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 611 698 192 63 16 chr13 3498831 3499021 -116785291 - RMER17C LTR ERVK -211 199 1 6 611 228 257 151 41 chr13 3499021 3499080 -116785232 + B3A SINE B2 94 160 -38 6 611 29 28 0 0 chr13 3499554 3499590 -116784722 + AT_rich Low_complexity Low_complexity 1 36 0 6 611 951 40 0 0 chr13 3499733 3499857 -116784455 + (TG)n Simple_repeat Simple_repeat 2 125 0 6 611 402 21 0 0 chr13 3500651 3500698 -116783614 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 611 4676 73 0 2 chr13 3500845 3501433 -116782879 - LTRIS_Mus LTR ERV1 0 587 1 2 611 324 0 0 0 chr13 3501462 3501498 -116782814 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 611 194 105 26 0 chr13 3501649 3501687 -116782625 + (TTTTTG)n Simple_repeat Simple_repeat 3 41 0 4 611 410 0 20 0 chr13 3503354 3503404 -116780908 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 611 186 43 0 0 chr13 3503517 3503540 -116780772 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 611 249 391 0 8 chr13 3503590 3503719 -116780593 + MIRb SINE MIR 28 155 -113 7 611 437 258 115 82 chr13 3504388 3504570 -116779742 + B3A SINE B2 1 188 -7 8 611 9799 74 1 9 chr13 3504580 3505085 -116779227 + L1_Mm LINE L1 2151 2655 -3228 9 611 1963 125 9 51 chr13 3505085 3505421 -116778891 - RLTRETN_Mm LTR ERVK 0 322 1 1 611 9799 74 1 9 chr13 3505421 3506240 -116778072 + L1_Mm LINE L1 2656 3465 -2418 9 611 14705 99 28 21 chr13 3506240 3509130 -116775182 + ETnERV2-int LTR ERVK 3219 7124 -282 1 611 1895 103 35 19 chr13 3509130 3509447 -116774865 + RLTRETN_Mm LTR ERVK 1 322 0 1 611 23879 63 7 1 chr13 3509447 3512872 -116771440 + L1Md_F2 LINE L1 2738 6184 -398 1 611 271 203 17 17 chr13 3512872 3512932 -116771380 - RLTR46 LTR ERVK 0 320 261 1 611 817 271 17 38 chr13 3512932 3513223 -116771089 + L1MA9 LINE L1 5379 5663 -649 1 611 359 229 36 0 chr13 3513231 3513314 -116770998 + L1MA9 LINE L1 5643 5728 -584 1 611 1205 210 71 88 chr13 3513323 3513574 -116770738 + ORR1D2 LTR MaLR 4 251 -119 1 611 1693 31 0 0 chr13 3513574 3513767 -116770545 - B2_Mm1a SINE B2 0 193 1 1 611 1205 210 71 88 chr13 3513767 3513880 -116770432 + ORR1D2 LTR MaLR 252 362 -8 1 611 268 205 1 40 chr13 3513899 3513988 -116770324 + L1MA9 LINE L1 5746 5829 -483 1 611 788 330 43 0 chr13 3513989 3514268 -116770044 + B4A SINE B4 1 291 -1 1 611 661 75 47 0 chr13 3514317 3514423 -116769889 + (GGAAA)n Simple_repeat Simple_repeat 4 114 0 1 611 596 297 82 53 chr13 3514423 3514683 -116769629 + L1MA9 LINE L1 5814 6085 -227 1 611 692 221 92 5 chr13 3514683 3514879 -116769433 + B3 SINE B2 2 214 -2 1 611 596 297 82 53 chr13 3514879 3515055 -116769257 + L1MA9 LINE L1 6086 6263 -49 1 611 202 182 0 0 chr13 3515191 3515224 -116769088 + polypyrimidine Low_complexity Low_complexity 3 35 0 2 611 2164 160 32 15 chr13 3516288 3516694 -116767618 + MTC LTR MaLR 1 413 -8 2 611 442 265 8 0 chr13 3516872 3516989 -116767323 - ID_B1 SINE B4 -11 213 96 2 611 395 224 67 20 chr13 3517005 3517155 -116767157 - L1MA7 LINE L1 -1 6290 6134 2 611 590 222 15 15 chr13 3517329 3517466 -116766846 - RMER1C Other Other -3 1339 1203 2 611 471 214 7 21 chr13 3517466 3517609 -116766703 + GA-rich Low_complexity Low_complexity 1 141 0 2 611 405 192 8 119 chr13 3517609 3517727 -116766585 - RMER1C Other Other -127 1215 1111 2 611 584 214 44 152 chr13 3517718 3517988 -116766324 - L1MA7 LINE L1 -340 5951 5711 2 611 216 386 26 9 chr13 3518003 3518144 -116766168 + MIRb SINE MIR 2 146 -130 2 611 222 269 0 19 chr13 3519811 3519864 -116764448 + polypurine Low_complexity Low_complexity 4 55 0 2 611 318 338 43 14 chr13 3520017 3520158 -116764154 + LTR16D LTR ERVL 226 370 -281 2 611 334 339 17 8 chr13 3520219 3520338 -116763974 + LTR16D LTR ERVL 523 642 -9 2 611 297 308 11 21 chr13 3520702 3520795 -116763517 + B4A SINE B4 193 284 -8 2 611 639 0 0 0 chr13 3520858 3520929 -116763383 + (TC)n Simple_repeat Simple_repeat 2 72 0 3 611 21 0 0 0 chr13 3520992 3521013 -116763299 + AT_rich Low_complexity Low_complexity 1 21 0 3 611 438 262 47 60 chr13 3521428 3521578 -116762734 + MER20 DNA MER1_type 47 194 -25 3 611 251 224 29 15 chr13 3521741 3521809 -116762503 - ID4_ SINE ID -10 73 5 3 611 424 268 0 18 chr13 3521956 3522070 -116762242 + ID_B1 SINE B4 108 219 -5 3 611 510 17 0 0 chr13 3522074 3522133 -116762179 + (GGAA)n Simple_repeat Simple_repeat 3 61 0 3 611 203 364 7 54 chr13 3522133 3522281 -116762031 - L2c LINE L2 -127 3260 3120 3 611 1432 177 188 123 chr13 3522332 3522763 -116761549 - RMER6B LTR ERVK 0 461 3 3 611 360 301 72 109 chr13 3522861 3522999 -116761313 + LTR33A_ LTR ERVL 15 160 -371 3 611 1095 117 0 0 chr13 3523033 3523213 -116761099 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 611 210 229 0 76 chr13 3523701 3523767 -116760545 - ID4_ SINE ID -18 65 5 4 611 243 0 0 0 chr13 3523776 3523803 -116760509 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 611 816 78 0 0 chr13 3523819 3523935 -116760377 - B1_Mus1 SINE Alu 0 148 33 4 611 2783 27 9 0 chr13 3523935 3524263 -116760049 + L1Md_F2 LINE L1 6249 6579 -3 4 611 189 107 0 0 chr13 3524418 3524446 -116759866 + (A)n Simple_repeat Simple_repeat 1 28 0 4 611 251 79 0 0 chr13 3524446 3524484 -116759828 - B1_Mur4 SINE Alu -111 39 2 4 611 445 274 17 17 chr13 3524644 3524763 -116759549 - PB1D9 SINE Alu 0 120 2 4 611 210 236 0 0 chr13 3524772 3524827 -116759485 + CT-rich Low_complexity Low_complexity 2 56 0 4 611 284 284 0 58 chr13 3524828 3524914 -116759398 - ID4_ SINE ID -2 81 1 4 611 233 366 48 8 chr13 3524973 3525097 -116759215 - L2a LINE L2 -29 3397 3269 4 611 465 206 0 0 chr13 3526265 3526367 -116757945 + T-rich Low_complexity Low_complexity 1 102 0 5 611 834 152 34 27 chr13 3526367 3526516 -116757796 - B1_Mur4 SINE Alu 0 150 1 5 611 180 0 0 0 chr13 3526535 3526555 -116757757 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 5 611 535 197 196 6 chr13 3526571 3526729 -116757583 - Lx4A LINE L1 -12 7046 6859 5 611 969 109 7 28 chr13 3526728 3526870 -116757442 + Lx4A LINE L1 6697 6835 -223 5 611 21 36 0 0 chr13 3526970 3526998 -116757314 + AT_rich Low_complexity Low_complexity 1 28 0 5 611 674 290 58 27 chr13 3527078 3527268 -116757044 - B4 SINE B4 -61 231 34 5 611 3153 46 15 5 chr13 3527268 3527660 -116756652 - MTA_Mm LTR MaLR 0 396 1 5 611 674 290 58 27 chr13 3527660 3527692 -116756620 - B4 SINE B4 -259 33 2 5 611 348 274 85 0 chr13 3527825 3527931 -116756381 + PB1D10 SINE Alu 2 116 -1 5 611 2563 248 101 34 chr13 3528153 3528373 -116755939 + RCHARR1 DNA MER1_type 1 207 -767 5 611 789 192 14 0 chr13 3528373 3528519 -116755793 - B1_Mur3 SINE Alu 0 149 2 5 611 2563 248 101 34 chr13 3528519 3529207 -116755105 + RCHARR1 DNA MER1_type 208 970 -4 5 611 544 158 9 38 chr13 3529216 3529321 -116754991 + B1_Mur1 SINE Alu 48 149 0 6 611 3063 156 98 17 chr13 3530059 3530977 -116753335 - RLTR13D1 LTR ERVK 0 1023 1 6 611 1608 132 14 122 chr13 3531343 3531704 -116752608 + RLTRETN_Mm LTR ERVK 1 322 0 6 611 271 276 109 105 chr13 3532011 3532258 -116752054 + MER57A-int LTR ERV1 3943 4190 -1997 6 611 274 98 0 38 chr13 3532258 3532311 -116752001 + (TCC)n Simple_repeat Simple_repeat 3 53 0 6 611 1394 91 5 0 chr13 3532469 3532655 -116751657 + B2_Mm2 SINE B2 1 187 -8 6 611 426 255 54 18 chr13 3532675 3532787 -116751525 + B1F1 SINE Alu 34 149 0 6 611 688 125 68 75 chr13 3532976 3533123 -116751189 - B1_Mus1 SINE Alu -1 147 2 6 611 533 227 44 36 chr13 3533261 3533398 -116750914 - ID_B1 SINE B4 -8 216 79 6 611 702 291 108 16 chr13 3533416 3533674 -116750638 - B4 SINE B4 -9 283 2 6 611 423 0 0 0 chr13 3534146 3534193 -116750119 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 611 25 0 0 0 chr13 3534517 3534542 -116749770 + AT_rich Low_complexity Low_complexity 1 25 0 7 611 330 274 102 15 chr13 3534712 3534849 -116749463 - RSINE1 SINE B4 -14 151 3 7 611 1231 62 0 0 chr13 3535485 3535631 -116748681 - B1_Mus2 SINE Alu -1 146 1 7 611 3489 136 65 5 chr13 3535635 3536283 -116748029 - RMER6A LTR ERVK -4 752 66 7 611 323 272 126 30 chr13 3536394 3536625 -116747687 - MER57D LTR ERV1 -4 407 155 7 611 189 0 0 0 chr13 3537141 3537162 -116747150 + (A)n Simple_repeat Simple_repeat 1 21 0 7 611 231 220 17 17 chr13 3537327 3537387 -116746925 + C-rich Low_complexity Low_complexity 2 61 0 7 611 28 48 0 0 chr13 3537615 3537657 -116746655 + GC_rich Low_complexity Low_complexity 1 42 0 7 611 249 33 0 0 chr13 3538060 3538090 -116746222 + (CAG)n Simple_repeat Simple_repeat 2 31 0 7 611 761 75 0 0 chr13 3538811 3538918 -116745394 - B1_Mus2 SINE Alu 0 147 41 8 611 306 229 49 107 chr13 3538814 3538936 -116745376 - B4 SINE B4 -69 223 109 8 612 230 186 23 0 chr13 3539159 3539202 -116745110 + MurSatRep1 Unknown Unknown 229 272 -1865 8 612 495 247 12 88 chr13 3539316 3539476 -116744836 - B1_Mur2 SINE Alu 0 149 2 8 612 572 193 27 82 chr13 3540465 3540612 -116743700 + B1_Mus1 SINE Alu 10 148 0 8 612 198 71 0 0 chr13 3541028 3541056 -116743256 + (T)n Simple_repeat Simple_repeat 1 28 0 8 612 440 269 20 34 chr13 3541605 3541751 -116742561 + B1F1 SINE Alu 6 149 0 8 612 186 43 0 0 chr13 3542329 3542352 -116741960 + (A)n Simple_repeat Simple_repeat 1 23 0 8 612 323 284 19 38 chr13 3542456 3542562 -116741750 + PB1D10 SINE Alu 14 117 0 8 612 512 206 150 8 chr13 3542639 3542766 -116741546 + B1F2 SINE Alu 1 145 -4 8 612 476 320 13 7 chr13 3542873 3543024 -116741288 + RSINE1 SINE B4 12 163 -2 9 612 630 215 67 0 chr13 3543459 3543594 -116740718 + B1_Mur2 SINE Alu 1 144 -5 9 612 392 219 95 44 chr13 3543675 3543833 -116740479 + L1M5 LINE L1 5164 5329 -817 9 612 566 196 270 35 chr13 3543833 3544007 -116740305 + B3 SINE B2 2 216 0 9 612 256 231 0 15 chr13 3544579 3544645 -116739667 + MER5A DNA MER1_type 23 87 -102 9 612 255 289 142 50 chr13 3544804 3544924 -116739388 - MER58B DNA MER1_type -31 310 180 9 612 263 288 27 0 chr13 3545023 3545096 -116739216 + B1_Mus1 SINE Alu 13 87 -61 9 612 749 271 38 0 chr13 3545157 3545393 -116738919 - B4 SINE B4 -11 281 37 9 612 3858 157 29 30 chr13 3545856 3546613 -116737699 - RMER6A LTR ERVK 0 756 1 9 612 873 227 24 5 chr13 3546741 3546949 -116737363 - B3 SINE B2 -1 215 4 9 612 1244 118 32 0 chr13 3547450 3547636 -116736676 - B2_Mm1t SINE B2 0 193 2 1 612 533 215 21 36 chr13 3548331 3548471 -116735841 - B1_Mur2 SINE Alu -10 139 2 1 612 381 198 104 0 chr13 3549050 3549146 -116735166 - PB1D10 SINE Alu 0 117 12 1 612 1235 85 90 0 chr13 3549383 3549560 -116734752 + B2_Mm2 SINE B2 1 193 -2 1 612 3427 18 15 0 chr13 3550637 3551027 -116733285 - MTA_Mm LTR MaLR 0 396 1 1 612 469 282 34 27 chr13 3551247 3551393 -116732919 + B1F1 SINE Alu 2 148 -1 1 612 279 0 0 0 chr13 3551407 3551438 -116732874 + (TTA)n Simple_repeat Simple_repeat 1 31 0 1 612 22 35 0 0 chr13 3551519 3551548 -116732764 + AT_rich Low_complexity Low_complexity 1 29 0 1 612 1157 75 0 7 chr13 3552727 3552875 -116731437 - B1_Mus2 SINE Alu 0 147 1 1 612 23 33 0 0 chr13 3552883 3552913 -116731399 + AT_rich Low_complexity Low_complexity 1 30 0 1 612 1228 14 7 0 chr13 3553157 3553297 -116731015 + B1_Mm SINE Alu 1 141 -6 1 612 393 196 226 0 chr13 3554075 3554177 -116730135 - B1_Mur2 SINE Alu -2 147 23 1 612 973 213 5 46 chr13 3554179 3554378 -116729934 - B3 SINE B2 -4 212 22 1 612 2706 41 22 0 chr13 3554378 3554698 -116729614 - IAPLTR2b LTR ERVK 0 327 1 1 612 973 213 5 46 chr13 3554698 3554715 -116729597 - B3 SINE B2 -195 21 5 1 612 1233 94 35 0 chr13 3554997 3555168 -116729144 + B2_Mm1t SINE B2 3 179 -14 1 612 492 72 313 26 chr13 3555240 3555355 -116728957 + B2_Mm2 SINE B2 48 195 0 1 612 27 29 0 0 chr13 3556417 3556451 -116727861 + AT_rich Low_complexity Low_complexity 1 34 0 1 612 984 65 65 0 chr13 3556539 3556677 -116727635 + B1_Mus2 SINE Alu 1 147 0 1 612 229 270 0 13 chr13 3556923 3556998 -116727314 - L1M5 LINE L1 -427 5737 5664 1 612 435 329 64 7 chr13 3557291 3557432 -116726880 - B1_Mur3 SINE Alu 0 149 1 1 612 204 78 38 38 chr13 3557444 3557497 -116726815 + T-rich Low_complexity Low_complexity 2 54 0 1 612 1179 61 0 0 chr13 3557503 3557650 -116726662 - B1_Mus2 SINE Alu 0 147 1 1 612 300 219 148 27 chr13 3557734 3557946 -116726366 - L1M5 LINE L1 -728 5436 5197 1 612 372 22 0 0 chr13 3558170 3558215 -116726097 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 612 270 297 27 13 chr13 3558480 3558555 -116725757 - ID SINE ID -141 83 8 1 612 1113 70 0 0 chr13 3559021 3559163 -116725149 + B1_Mus1 SINE Alu 1 142 -6 1 612 325 311 100 18 chr13 3559896 3560014 -116724298 - L1M3 LINE L1 -458 5725 5602 1 612 213 39 0 0 chr13 3560014 3560040 -116724272 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 612 325 311 100 18 chr13 3560040 3560091 -116724221 - L1M3 LINE L1 -582 5601 5543 1 612 750 203 7 14 chr13 3560214 3560359 -116723953 - B1_Mm SINE Alu -1 146 3 1 612 259 198 94 55 chr13 3560361 3560489 -116723823 - L1M3 LINE L1 -818 5322 5190 1 612 273 255 252 9 chr13 3560692 3560803 -116723509 - B1F2 SINE Alu 0 149 12 1 612 251 192 240 40 chr13 3560897 3561022 -116723290 - L1M3 LINE L1 -1364 4776 4627 1 612 743 106 0 9 chr13 3561836 3561950 -116722362 + B2_Mm2 SINE B2 2 114 -81 1 612 207 0 0 0 chr13 3561952 3561975 -116722337 + (A)n Simple_repeat Simple_repeat 1 23 0 1 612 1252 129 47 9 chr13 3562123 3562335 -116721977 + RLTR15 LTR ERVK 137 356 -3 1 612 858 132 59 0 chr13 3562539 3562675 -116721637 - B2_Mm1t SINE B2 -49 144 1 1 612 27 29 0 0 chr13 3562843 3562877 -116721435 + AT_rich Low_complexity Low_complexity 1 34 0 1 612 603 181 34 89 chr13 3562915 3563061 -116721251 + B1_Mus1 SINE Alu 11 148 0 1 612 238 179 140 18 chr13 3563140 3563197 -116721115 - ID_B1 SINE B4 0 224 161 1 612 987 70 161 0 chr13 3563531 3563674 -116720638 + B2_Mm1t SINE B2 2 167 -26 1 612 219 150 0 0 chr13 3565301 3565341 -116718971 + (A)n Simple_repeat Simple_repeat 1 40 0 1 612 431 276 169 60 chr13 3566906 3567072 -116717240 - B3A SINE B2 -6 192 9 1 612 24 0 0 0 chr13 3567177 3567201 -116717111 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 326 258 250 30 chr13 3567377 3567613 -116716699 + B4A SINE B4 4 291 -1 1 612 314 279 143 45 chr13 3568374 3568618 -116715694 + L1_Rod LINE L1 5450 5717 -130 1 612 745 203 14 14 chr13 3569734 3569879 -116714433 - B1_Mm SINE Alu 0 147 3 1 612 359 258 103 0 chr13 3569914 3570011 -116714301 + PB1D10 SINE Alu 1 107 -10 1 612 657 63 8 139 chr13 3570136 3570265 -116714047 - B2_Mm2 SINE B2 -3 192 81 1 612 570 264 21 0 chr13 3570338 3570482 -116713830 - RSINE1 SINE B4 -16 149 3 1 612 1185 54 0 0 chr13 3570554 3570701 -116713611 + B1_Mus2 SINE Alu 1 147 0 1 612 306 231 30 15 chr13 3571507 3571573 -116712739 - B3A SINE B2 -99 99 33 1 612 1143 56 0 0 chr13 3571575 3571717 -116712595 + B1_Mus2 SINE Alu 1 142 -5 1 612 210 193 0 0 chr13 3571725 3571782 -116712530 + A-rich Low_complexity Low_complexity 1 57 0 1 612 449 256 88 68 chr13 3572155 3572302 -116712010 - B4A SINE B4 -1 291 142 1 612 180 0 0 0 chr13 3572628 3572648 -116711664 + (CATCC)n Simple_repeat Simple_repeat 2 21 0 1 612 304 267 53 0 chr13 3576567 3576642 -116707670 - ID4_ SINE ID 0 83 5 1 612 239 265 119 12 chr13 3576643 3576727 -116707585 + ID_B1 SINE B4 86 178 -46 1 612 292 198 128 119 chr13 3576819 3576928 -116707384 + PB1D9 SINE Alu 2 111 -9 1 612 1325 79 26 5 chr13 3577402 3577592 -116706720 + B2_Mm2 SINE B2 1 194 -1 1 612 321 89 0 0 chr13 3577592 3577637 -116706675 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 612 25 83 0 0 chr13 3577967 3578027 -116706285 + AT_rich Low_complexity Low_complexity 1 60 0 1 612 271 245 155 37 chr13 3578551 3578712 -116705600 + YREP_Mm Unknown Unknown 115 294 -1518 1 612 471 238 57 0 chr13 3578626 3578731 -116705581 - PB1D10 SINE Alu -6 111 1 1 612 252 0 0 0 chr13 3578745 3578773 -116705539 + (TAA)n Simple_repeat Simple_repeat 3 30 0 1 612 364 344 39 23 chr13 3578784 3578912 -116705400 - RSINE1 SINE B4 -22 143 14 1 612 539 221 21 71 chr13 3579020 3579161 -116705151 + B1_Mus1 SINE Alu 11 144 -4 1 612 180 176 0 0 chr13 3579522 3579556 -116704756 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 1 612 306 200 0 0 chr13 3579585 3579640 -116704672 - B3A SINE B2 -142 56 2 1 612 1165 68 0 0 chr13 3579909 3580056 -116704256 + B1_Mus2 SINE Alu 1 147 0 1 612 198 0 0 0 chr13 3580056 3580078 -116704234 + (A)n Simple_repeat Simple_repeat 1 22 0 1 612 845 278 88 77 chr13 3580237 3580522 -116703790 - B4 SINE B4 0 292 5 1 612 1065 49 20 27 chr13 3580661 3580808 -116703504 + B1_Mm SINE Alu 1 146 -1 1 612 290 309 110 46 chr13 3581578 3581734 -116702578 - MIRc SINE MIR -45 163 3 1 612 1263 76 38 5 chr13 3582301 3582486 -116701826 + B2_Mm1a SINE B2 1 191 -2 1 612 4508 39 4 0 chr13 3582723 3583264 -116701048 + L1Md_T LINE L1 6039 6581 -1 1 612 697 245 7 0 chr13 3583332 3583475 -116700837 - B1_Mur4 SINE Alu -1 149 6 1 612 1153 68 7 0 chr13 3585238 3585385 -116698927 + B1_Mus1 SINE Alu 1 148 0 1 612 1046 101 0 0 chr13 3585707 3585846 -116698466 + B1_Mus1 SINE Alu 2 140 -8 1 612 209 39 0 0 chr13 3585846 3585872 -116698440 + (CATA)n Simple_repeat Simple_repeat 3 28 0 1 612 291 190 0 0 chr13 3585890 3585948 -116698364 + (CATATA)n Simple_repeat Simple_repeat 3 60 0 1 612 802 262 9 37 chr13 3585955 3586173 -116698139 + B3 SINE B2 1 212 -4 1 612 382 198 66 0 chr13 3586418 3586539 -116697773 - RMER17C LTR ERVK -264 146 18 1 612 183 42 0 0 chr13 3586541 3586565 -116697747 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 612 825 29 0 0 chr13 3586565 3586670 -116697642 - B1_Mus2 SINE Alu -10 137 33 1 612 219 69 0 0 chr13 3586763 3586792 -116697520 + (T)n Simple_repeat Simple_repeat 1 29 0 1 612 1192 35 0 0 chr13 3586793 3586938 -116697374 - B1_Mus2 SINE Alu -1 146 2 1 612 916 220 58 11 chr13 3587254 3587442 -116696870 + B3 SINE B2 9 205 -11 1 612 255 311 154 8 chr13 3588060 3588183 -116696129 - MER58B DNA MER1_type 0 341 201 1 612 234 262 174 23 chr13 3588375 3588461 -116695851 + B3 SINE B2 53 151 -65 1 612 564 160 235 0 chr13 3588614 3588733 -116695579 + B1_Mm SINE Alu 1 147 0 1 612 800 112 79 8 chr13 3590889 3591015 -116693297 + B1_Mur4 SINE Alu 3 137 -13 1 612 234 268 14 0 chr13 3591188 3591259 -116693053 + ID4_ SINE ID 1 72 -11 1 612 634 270 50 27 chr13 3591313 3591495 -116692817 - B3A SINE B2 -11 184 2 1 612 21 0 0 0 chr13 3591738 3591759 -116692553 + AT_rich Low_complexity Low_complexity 1 21 0 1 612 815 244 29 10 chr13 3591770 3591977 -116692335 + B3 SINE B2 1 211 -5 1 612 303 315 0 0 chr13 3592316 3592389 -116691923 - B4 SINE B4 -218 74 2 1 612 961 234 148 50 chr13 3592461 3592610 -116691702 + ORR1D2 LTR MaLR 1 151 -219 1 612 1135 82 0 0 chr13 3592610 3592757 -116691555 + B1_Mus1 SINE Alu 1 147 -1 1 612 961 234 148 50 chr13 3592757 3592944 -116691368 + ORR1D2 LTR MaLR 152 370 0 1 612 1247 123 0 39 chr13 3594168 3594371 -116689941 - B2_Mm2 SINE B2 0 195 1 1 612 24 0 0 0 chr13 3594874 3594898 -116689414 + AT_rich Low_complexity Low_complexity 1 24 0 1 612 617 240 31 0 chr13 3594969 3595098 -116689214 - B1_Mur1 SINE Alu -15 134 2 1 612 651 221 0 32 chr13 3595173 3595299 -116689013 + B1_Mur2 SINE Alu 23 144 -5 1 612 632 188 0 41 chr13 3595403 3595525 -116688787 - B1_Mur1 SINE Alu -2 147 31 1 612 1132 75 0 0 chr13 3595767 3595914 -116688398 + B1_Mus2 SINE Alu 1 147 0 2 612 1655 36 0 0 chr13 3596240 3596433 -116687879 + B2_Mm1t SINE B2 1 193 0 2 612 256 290 257 14 chr13 3596435 3596575 -116687737 + B3A SINE B2 3 176 -22 2 612 309 169 0 0 chr13 3596906 3596965 -116687347 - L1MC4 LINE L1 -2 8040 7982 2 612 1090 180 221 26 chr13 3596999 3597302 -116687010 + RMER6B LTR ERVK 100 461 0 2 612 968 104 140 6 chr13 3597307 3597471 -116686841 + B2_Mm1t SINE B2 1 186 -7 2 612 1154 75 0 0 chr13 3597591 3597738 -116686574 + B1_Mm SINE Alu 1 147 0 2 612 531 177 206 16 chr13 3597770 3597896 -116686416 + B1_Mur4 SINE Alu 1 150 0 2 612 204 40 0 0 chr13 3598344 3598369 -116685943 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2 612 240 308 124 9 chr13 3598588 3598693 -116685619 + PB1 SINE Alu 2 118 -9 2 612 261 75 0 0 chr13 3599729 3599769 -116684543 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 612 279 0 0 0 chr13 3599769 3599800 -116684512 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 612 930 212 79 26 chr13 3599924 3600113 -116684199 - B3 SINE B2 -4 212 14 2 612 24 32 0 0 chr13 3600123 3600154 -116684158 + AT_rich Low_complexity Low_complexity 1 31 0 2 612 28 91 0 0 chr13 3601071 3601148 -116683164 + AT_rich Low_complexity Low_complexity 1 77 0 2 612 636 283 86 0 chr13 3601456 3601608 -116682704 + B3 SINE B2 41 205 -11 2 612 751 58 2 11 chr13 3601757 3601871 -116682441 - B1_Mus2 SINE Alu 0 149 36 2 612 2189 208 37 43 chr13 3602013 3602501 -116681811 + RLTR12B LTR ERVK 35 519 -9 2 612 313 219 9 158 chr13 3602802 3602916 -116681396 + MT2B LTR ERVL 161 257 -344 2 612 849 128 7 48 chr13 3602816 3602963 -116681349 + B1_Mur4 SINE Alu 9 149 -1 2 612 1602 21 0 11 chr13 3603693 3603881 -116680431 + B2_Mm1t SINE B2 1 186 -7 2 612 515 282 25 57 chr13 3603902 3604060 -116680252 - RSINE1 SINE B4 -4 161 9 2 612 270 296 0 24 chr13 3604066 3604149 -116680163 - PB1D7 SINE Alu -6 114 34 2 612 1130 75 7 0 chr13 3604516 3604662 -116679650 - B1_Mus1 SINE Alu -1 147 1 2 612 682 280 62 31 chr13 3605347 3605572 -116678740 - RMER12 LTR ERVK -117 1205 974 2 612 1021 82 0 0 chr13 3605579 3605714 -116678598 + B1_Mm SINE Alu 12 146 -1 2 612 701 233 17 28 chr13 3605734 3605911 -116678401 - RMER12 LTR ERVK -359 963 789 2 612 603 207 165 68 chr13 3605950 3606126 -116678186 + B3A SINE B2 6 198 0 2 612 243 273 110 10 chr13 3606148 3606248 -116678064 + PB1D10 SINE Alu 1 110 -7 2 612 241 294 59 0 chr13 3606288 3606356 -116677956 - ID4_ SINE ID -9 74 3 2 612 465 148 0 0 chr13 3606738 3606819 -116677493 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 612 240 245 19 0 chr13 3606892 3606945 -116677367 + Charlie1a DNA MER1_type 776 829 -626 2 612 495 272 133 48 chr13 3606987 3607296 -116677016 + Charlie1a DNA MER1_type 987 1321 -134 2 612 688 276 72 0 chr13 3607366 3607547 -116676765 + ID_B1 SINE B4 5 198 -26 2 612 1201 34 0 33 chr13 3608045 3608197 -116676115 + B1_Mm SINE Alu 1 147 0 2 612 1412 44 55 0 chr13 3608349 3608532 -116675780 + B2_Mm2 SINE B2 1 193 -2 2 612 301 222 92 112 chr13 3610843 3610995 -116673317 + RLTR14 LTR ERV1 220 368 -14 2 612 1139 101 13 0 chr13 3611303 3611462 -116672850 + B2_Mm2 SINE B2 1 161 -34 2 612 198 0 0 0 chr13 3611462 3611484 -116672828 + (TAA)n Simple_repeat Simple_repeat 3 24 0 2 612 1229 80 57 0 chr13 3611484 3611659 -116672653 + B2_Mm1t SINE B2 2 186 -7 2 612 497 76 0 37 chr13 3611667 3611749 -116672563 + L1Md_F2 LINE L1 6503 6581 -1 2 612 1177 61 0 0 chr13 3612822 3612969 -116671343 + B1_Mus2 SINE Alu 1 147 0 2 612 853 274 110 4 chr13 3613099 3613345 -116670967 + B4 SINE B4 20 291 -1 2 612 272 87 324 0 chr13 3613416 3613500 -116670812 - ORR1A2 LTR MaLR -2 382 272 2 612 1133 84 0 0 chr13 3613503 3613646 -116670666 - B1_Mus1 SINE Alu -1 147 5 2 612 1198 118 38 0 chr13 3613737 3613923 -116670389 - B2_Mm1t SINE B2 0 193 1 2 612 1498 106 25 92 chr13 3613925 3614206 -116670106 - ORR1A2 LTR MaLR -43 284 23 2 612 2544 97 124 12 chr13 3614206 3614633 -116669679 + IAPLTR2_Mm LTR ERVK 1 475 0 2 612 898 147 89 94 chr13 3614635 3614838 -116669474 + IAPEz-int LTR ERVK 3 204 -1783 2 612 226 244 0 0 chr13 3614844 3614889 -116669423 + RLTR27 LTR ERVK 231 275 -34 2 612 3150 49 26 0 chr13 3614889 3615387 -116668925 + IAPEz-int LTR ERVK 168 603 -5878 2 612 7117 45 79 0 chr13 3615394 3616657 -116667655 + IAPEz-int LTR ERVK 1412 2774 -3707 2 612 3245 11 0 0 chr13 3616655 3617015 -116667297 + IAPEz-int LTR ERVK 4001 4360 -2121 2 612 5534 59 13 20 chr13 3617015 3617725 -116666587 + IAPEz-int LTR ERVK 5775 6479 -2 2 612 2559 104 124 12 chr13 3617727 3618154 -116666158 + IAPLTR2_Mm LTR ERVK 1 475 0 2 612 583 179 198 23 chr13 3618193 3618365 -116665947 - ORR1C2 LTR MaLR -60 324 123 2 612 2093 170 23 18 chr13 3618405 3618527 -116665785 + Lx9 LINE L1 6765 6884 -760 2 612 4577 73 2 17 chr13 3618527 3619123 -116665189 - LTRIS_Mus LTR ERV1 0 587 1 2 612 2093 170 23 18 chr13 3619123 3619384 -116664928 + Lx9 LINE L1 6885 7150 -494 2 612 787 194 55 16 chr13 3619396 3619579 -116664733 + Lx9 LINE L1 7287 7476 -168 2 612 389 70 18 0 chr13 3619579 3619636 -116664676 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 612 394 144 63 63 chr13 3619636 3619683 -116664629 + Lx9 LINE L1 7517 7569 -75 2 612 1899 112 59 7 chr13 3619683 3619989 -116664323 - RLTRETN_Mm LTR ERVK 0 322 1 2 612 394 144 63 63 chr13 3619989 3620067 -116664245 + Lx9 LINE L1 7570 7642 -2 2 612 270 0 0 0 chr13 3620080 3620110 -116664202 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 2 612 1120 84 0 0 chr13 3620134 3620276 -116664036 + B1_Mus1 SINE Alu 1 142 -6 2 612 453 50 0 0 chr13 3620278 3620338 -116663974 + (GAAA)n Simple_repeat Simple_repeat 2 61 0 2 612 586 110 88 20 chr13 3620353 3620455 -116663857 + B1_Mur4 SINE Alu 42 150 0 2 612 231 167 0 0 chr13 3620455 3620497 -116663815 + GA-rich Low_complexity Low_complexity 4 45 0 2 612 1365 83 10 10 chr13 3620565 3620771 -116663541 - LTRIS2 LTR ERV1 0 564 359 2 612 1297 51 15 119 chr13 3620772 3620828 -116663484 + B2_Mm2 SINE B2 1 42 -153 2 612 1155 76 0 0 chr13 3620828 3620973 -116663339 - B1_Mus2 SINE Alu -1 146 2 2 612 1297 51 15 119 chr13 3620973 3621117 -116663195 + B2_Mm2 SINE B2 43 180 -15 2 612 287 53 0 0 chr13 3621117 3621155 -116663157 + PB1D9 SINE Alu 2 39 -81 2 612 1660 95 20 0 chr13 3621192 3621444 -116662868 - LTRIS2 LTR ERV1 -194 370 114 2 612 798 72 9 0 chr13 3621445 3621556 -116662756 - B1_Mus2 SINE Alu -35 112 1 2 612 256 256 24 0 chr13 3621556 3621570 -116662742 - ORR1C2-int LTR MaLR -750 759 632 2 612 614 61 0 0 chr13 3621690 3621772 -116662540 - B1_Mus2 SINE Alu -65 82 1 2 612 1480 59 27 0 chr13 3621794 3621981 -116662331 - B2_Mm1t SINE B2 -1 192 1 2 612 582 191 18 0 chr13 3622001 3622111 -116662201 + B3 SINE B2 90 201 -15 2 612 1445 256 116 51 chr13 3622335 3623001 -116661311 + ORR1D-int LTR MaLR 397 1105 -265 2 612 3967 38 2 71 chr13 3623097 3623690 -116660622 - LTRIS2 LTR ERV1 -12 552 1 2 612 619 308 120 37 chr13 3623698 3624298 -116660014 + L1M4 LINE L1 3656 4305 -1841 2 612 1093 94 20 0 chr13 3624304 3624481 -116659831 - B2_Mm2 SINE B2 -1 192 2 2 612 1102 91 0 0 chr13 3624492 3624635 -116659677 - B1_Mus1 SINE Alu -1 147 5 2 612 1152 117 0 0 chr13 3624645 3624816 -116659496 - B2_Mm2 SINE B2 -24 171 1 2 612 1210 48 0 0 chr13 3624843 3624988 -116659324 + B1_Mus2 SINE Alu 3 147 0 2 612 1521 198 117 106 chr13 3625349 3625914 -116658398 - RLTR21 LTR ERVK -243 1329 759 2 612 4602 170 56 8 chr13 3625914 3626822 -116657490 - RMER17B LTR ERVK 0 958 7 2 612 3648 157 56 57 chr13 3626804 3627588 -116656724 - RLTR21 LTR ERVK -789 783 1 2 612 464 283 63 49 chr13 3627605 3627828 -116656484 + L1M4 LINE L1 4533 4758 -1388 2 612 539 209 16 4 chr13 3627856 3628106 -116656206 + GA-rich Low_complexity Low_complexity 1 253 0 2 612 250 356 30 15 chr13 3628796 3628930 -116655382 - L1M5 LINE L1 -670 5570 5435 2 612 1473 79 16 0 chr13 3629104 3629294 -116655018 - B2_Mm2 SINE B2 -1 194 2 2 612 216 0 0 0 chr13 3629404 3629428 -116654884 + (T)n Simple_repeat Simple_repeat 1 24 0 2 612 1087 42 0 0 chr13 3629430 3629572 -116654740 - B1_Mus2 SINE Alu 0 147 6 2 612 618 174 6 63 chr13 3629572 3629587 -116654725 - ID_B1 SINE B4 0 222 75 2 612 228 309 42 68 chr13 3629938 3630056 -116654256 + PB1D10 SINE Alu 3 117 0 2 612 244 174 103 52 chr13 3630191 3630288 -116654024 - ORR1D1 LTR MaLR 0 379 278 2 612 478 235 140 0 chr13 3630479 3630615 -116653697 - RMER30 DNA MER1_type -2 200 46 2 612 253 301 12 24 chr13 3630662 3630747 -116653565 - ORR1D1 LTR MaLR -284 90 7 2 612 2361 87 12 42 chr13 3631111 3631447 -116652865 + ORR1A3 LTR MaLR 1 326 0 2 612 312 115 0 0 chr13 3631491 3631497 -116652815 + (A)n Simple_repeat Simple_repeat 1 6 0 2 612 1150 56 0 0 chr13 3631497 3631640 -116652672 + B1_Mus2 SINE Alu 5 147 0 2 612 312 115 0 0 chr13 3631640 3631685 -116652627 + (A)n Simple_repeat Simple_repeat 1 45 0 2 612 372 297 105 72 chr13 3631954 3632230 -116652082 + B4 SINE B4 8 292 0 2 612 229 82 0 140 chr13 3632244 3632301 -116652011 + A-rich Low_complexity Low_complexity 3 51 0 2 612 527 132 11 0 chr13 3632782 3632873 -116651439 + (GA)n Simple_repeat Simple_repeat 1 92 0 2 612 1092 75 7 0 chr13 3634188 3634334 -116649978 + B1_Mus2 SINE Alu 1 147 0 2 612 404 261 28 0 chr13 3634631 3634740 -116649572 + B1F SINE Alu 1 109 -8 2 612 1145 62 0 0 chr13 3634800 3634944 -116649368 - B1_Mus1 SINE Alu 0 148 5 2 612 1064 75 0 45 chr13 3635268 3635422 -116648890 - B1_Mus2 SINE Alu 0 147 1 2 612 1547 58 5 0 chr13 3635585 3635775 -116648537 + B2_Mm1a SINE B2 1 191 -2 2 612 274 284 99 18 chr13 3636016 3636127 -116648185 + PB1D7 SINE Alu 1 120 0 2 612 207 0 0 0 chr13 3636540 3636563 -116647749 + (AGGGGG)n Simple_repeat Simple_repeat 1 23 0 2 612 310 77 0 0 chr13 3636565 3636617 -116647695 + L1_Mus4 LINE L1 6579 6630 -6 2 612 186 43 0 0 chr13 3636703 3636726 -116647586 + (TTTTG)n Simple_repeat Simple_repeat 5 27 0 2 612 1051 75 0 0 chr13 3636820 3636954 -116647358 - B1_Mus2 SINE Alu -13 134 1 2 612 713 165 7 29 chr13 3637522 3637659 -116646653 - B1_Mur3 SINE Alu -1 148 15 2 612 614 253 11 169 chr13 3637659 3637688 -116646624 - ID_B1 SINE B4 -2 222 93 3 612 494 253 198 0 chr13 3637688 3637850 -116646462 - B3A SINE B2 0 198 5 3 612 614 253 11 169 chr13 3637850 3637944 -116646368 - ID_B1 SINE B4 -132 92 3 3 612 469 314 15 22 chr13 3638723 3638860 -116645452 + B4A SINE B4 157 292 0 3 612 1329 247 16 49 chr13 3639482 3639848 -116644464 + MTEa LTR MaLR 26 379 0 3 612 898 238 20 5 chr13 3639872 3640075 -116644237 - B3 SINE B2 -9 207 2 3 612 1025 257 110 18 chr13 3640087 3640487 -116643825 - L1MB3 LINE L1 -4 6179 5743 3 612 442 212 71 0 chr13 3640505 3640604 -116643708 - RMER15 LTR ERVL -122 453 348 3 612 1236 34 0 13 chr13 3640702 3640851 -116643461 - B1_Mm SINE Alu 0 147 1 3 612 411 73 159 32 chr13 3642999 3643117 -116641195 - B2_Mm2 SINE B2 -3 192 46 3 612 1228 119 11 0 chr13 3643129 3643306 -116641006 - B2_Mm1t SINE B2 -14 179 1 3 612 3348 25 5 15 chr13 3643672 3644072 -116640240 + MTA_Mm LTR MaLR 1 396 0 3 612 208 171 0 0 chr13 3644495 3644530 -116639782 + MIRb SINE MIR 220 254 -14 3 612 216 0 0 0 chr13 3644540 3644564 -116639748 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 3 612 639 133 0 0 chr13 3644574 3644679 -116639633 + (GA)n Simple_repeat Simple_repeat 1 105 0 3 612 357 200 29 0 chr13 3644679 3644749 -116639563 - B3A SINE B2 -39 159 88 3 612 246 120 66 13 chr13 3645833 3645909 -116638403 + GA-rich Low_complexity Low_complexity 2 81 0 3 612 697 156 23 8 chr13 3646117 3646246 -116638066 - RLTR13D6 LTR ERVK -771 131 1 3 612 1111 114 28 33 chr13 3646389 3646571 -116637741 + B2_Mm2 SINE B2 1 181 -14 3 612 35 63 0 0 chr13 3647517 3647580 -116636732 + AT_rich Low_complexity Low_complexity 1 63 0 3 612 292 330 0 60 chr13 3647604 3647720 -116636592 - RSINE1 SINE B4 -15 150 42 3 612 385 262 47 0 chr13 3647789 3647896 -116636416 + 5S rRNA rRNA 8 119 -2 3 612 545 70 30 10 chr13 3648269 3648370 -116635942 + (TA)n Simple_repeat Simple_repeat 1 103 0 3 612 580 263 0 0 chr13 3650220 3650338 -116633974 + B3A SINE B2 51 168 -30 3 612 315 0 0 0 chr13 3650339 3650374 -116633938 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 612 369 0 0 0 chr13 3650374 3650414 -116633898 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 612 228 184 0 0 chr13 3650457 3650506 -116633806 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 612 910 152 21 0 chr13 3651154 3651299 -116633013 - B1_Mur2 SINE Alu -1 148 1 3 612 212 263 0 136 chr13 3651772 3651838 -116632474 + PB1D9 SINE Alu 54 110 -10 3 612 558 120 28 39 chr13 3652159 3652341 -116631971 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 612 472 166 30 18 chr13 3652385 3652551 -116631761 + (CA)n Simple_repeat Simple_repeat 1 168 0 3 612 1216 34 0 14 chr13 3653157 3653305 -116631007 - B1_Mus2 SINE Alu 0 147 2 3 612 435 19 0 0 chr13 3653310 3653362 -116630950 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 612 235 322 0 0 chr13 3653406 3653465 -116630847 + B4A SINE B4 88 146 -146 3 612 367 324 0 36 chr13 3653413 3653525 -116630787 + PB1D10 SINE Alu 10 117 0 3 612 1177 89 107 0 chr13 3654070 3654239 -116630073 + B2_Mm1a SINE B2 2 188 -5 3 612 299 293 25 49 chr13 3654572 3654694 -116629618 + PB1D7 SINE Alu 1 119 -1 3 612 202 167 16 16 chr13 3654730 3654791 -116629521 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 612 958 198 59 0 chr13 3654855 3655042 -116629270 - B3 SINE B2 -5 211 14 3 612 207 200 0 0 chr13 3655441 3655486 -116628826 + A-rich Low_complexity Low_complexity 1 45 0 3 612 593 14 14 0 chr13 3656591 3656665 -116627647 + (TCTA)n Simple_repeat Simple_repeat 3 77 0 3 612 570 255 63 90 chr13 3656869 3657279 -116627033 - MTEa LTR MaLR -2 377 1 3 612 2035 86 6 51 chr13 3657284 3657615 -116626697 + ORR1A2 LTR MaLR 1 316 -11 3 612 371 302 85 14 chr13 3657619 3657760 -116626552 + MLT1A0 LTR MaLR 133 283 -82 3 612 441 230 56 62 chr13 3658170 3658314 -116625998 + B4 SINE B4 9 151 -141 3 612 295 324 64 14 chr13 3659247 3659388 -116624924 + MER5A DNA MER1_type 36 183 -6 3 612 524 312 68 31 chr13 3659390 3659582 -116624730 + ID_B1 SINE B4 26 224 0 3 612 356 185 0 23 chr13 3659582 3659719 -116624593 + GA-rich Low_complexity Low_complexity 1 133 0 3 612 216 0 0 0 chr13 3659926 3659950 -116624362 + (T)n Simple_repeat Simple_repeat 1 24 0 3 612 531 177 0 0 chr13 3660010 3660140 -116624172 + CT-rich Low_complexity Low_complexity 3 132 0 3 612 545 280 77 26 chr13 3660144 3660338 -116623974 - MER58A DNA MER1_type -20 204 1 3 612 585 132 0 0 chr13 3661159 3661280 -116623032 + (TC)n Simple_repeat Simple_repeat 2 122 0 3 612 446 103 0 105 chr13 3661286 3661362 -116622950 - ID4_ SINE ID -11 72 5 3 612 533 248 148 21 chr13 3661808 3662080 -116622232 + MTEa LTR MaLR 1 369 -10 3 612 189 0 0 0 chr13 3662096 3662117 -116622195 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 612 1076 54 0 75 chr13 3662137 3662275 -116622037 + B1_Mus1 SINE Alu 2 135 -13 3 612 225 0 0 0 chr13 3662275 3662300 -116622012 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 3 612 1076 54 0 75 chr13 3662300 3662320 -116621992 + B1_Mus1 SINE Alu 136 148 0 3 612 182 37 37 0 chr13 3662320 3662347 -116621965 + (CAAAAA)n Simple_repeat Simple_repeat 6 33 0 3 612 1281 105 10 31 chr13 3662602 3662798 -116621514 - B2_Mm1t SINE B2 0 193 2 3 612 31 26 0 0 chr13 3662802 3662840 -116621472 + AT_rich Low_complexity Low_complexity 1 38 0 3 612 369 122 0 5 chr13 3662854 3662919 -116621393 - B2_Mm2 SINE B2 -107 109 47 3 612 1144 105 41 0 chr13 3662951 3663122 -116621190 - B2_Mm1t SINE B2 -14 179 2 3 612 210 136 74 0 chr13 3664384 3664465 -116619847 + (TA)n Simple_repeat Simple_repeat 2 88 0 3 612 42 65 0 0 chr13 3664465 3664542 -116619770 + AT_rich Low_complexity Low_complexity 1 77 0 3 612 645 201 39 41 chr13 3664544 3664731 -116619581 - B2_Mm2 SINE B2 -11 205 3 3 612 322 247 143 28 chr13 3665201 3665459 -116618853 - L1MA9 LINE L1 -5 6307 6013 3 612 290 270 6 0 chr13 3665463 3665641 -116618671 + (TG)n Simple_repeat Simple_repeat 1 179 0 3 612 689 201 128 28 chr13 3665686 3665865 -116618447 - B3A SINE B2 0 198 2 3 612 425 220 33 25 chr13 3665928 3666049 -116618263 - B4A SINE B4 -59 233 112 3 612 636 280 28 6 chr13 3666133 3666309 -116618003 - B3A SINE B2 -18 180 1 3 612 1046 206 9 23 chr13 3666837 3667055 -116617257 + B3 SINE B2 2 216 0 3 612 198 271 58 116 chr13 3667145 3667266 -116617046 - MER5A DNA MER1_type -28 161 48 3 612 1474 261 19 16 chr13 3667900 3668278 -116616034 + MTEa LTR MaLR 1 379 0 3 612 243 0 0 0 chr13 3669912 3669939 -116614373 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 613 804 204 0 0 chr13 3670021 3670197 -116614115 + CT-rich Low_complexity Low_complexity 1 176 0 3 613 910 223 28 36 chr13 3670197 3670444 -116613868 - B4A SINE B4 -46 246 2 3 613 269 387 30 17 chr13 3670504 3670738 -116613574 - MIR SINE MIR -5 257 21 3 613 1345 280 63 85 chr13 3670957 3671547 -116612765 - Lx8 LINE L1 -2 7471 6895 3 613 1385 69 16 5 chr13 3671644 3671833 -116612479 - B2_Mm1t SINE B2 -2 191 1 3 613 628 252 13 13 chr13 3671836 3671985 -116612327 - B1_Mur1 SINE Alu 0 149 1 3 613 335 197 197 35 chr13 3672136 3672278 -116612034 - Lx8 LINE L1 -2 7471 7307 3 613 450 0 0 0 chr13 3673318 3673368 -116610944 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 613 438 218 0 0 chr13 3674497 3674607 -116609705 + (TG)n Simple_repeat Simple_repeat 1 110 0 3 613 351 65 0 0 chr13 3674606 3674652 -116609660 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 613 860 244 142 20 chr13 3674652 3674899 -116609413 - B4 SINE B4 -7 285 9 3 613 23 33 0 0 chr13 3675722 3675752 -116608560 + AT_rich Low_complexity Low_complexity 1 30 0 3 613 888 224 48 34 chr13 3675752 3675960 -116608352 - ID_B1 SINE B4 -13 211 1 3 613 540 330 98 24 chr13 3676493 3676903 -116607409 + RMER5 LTR ERV1 57 496 -38 3 613 541 194 28 9 chr13 3677005 3677114 -116607198 - MTEa LTR MaLR -15 364 254 3 613 1010 135 213 16 chr13 3677408 3677596 -116606716 + URR1A DNA MER1_type 2 226 0 3 613 682 289 118 0 chr13 3677866 3678094 -116606218 - MTEa LTR MaLR -124 255 1 3 613 380 316 136 31 chr13 3679012 3679270 -116605042 + B4A SINE B4 2 286 -6 3 613 985 223 42 40 chr13 3679675 3680005 -116604307 - ORR1D1 LTR MaLR -4 366 17 3 613 3657 101 54 0 chr13 3682676 3683191 -116601121 - L1Md_F LINE L1 -5483 1036 494 3 613 1615 118 0 0 chr13 3683755 3683975 -116600337 - Lx LINE L1 -401 6253 6034 3 613 2884 94 2 2 chr13 3683976 3684379 -116599933 + Lx LINE L1 6252 6654 0 3 613 1232 226 66 0 chr13 3684422 3684696 -116599616 + B4A SINE B4 1 292 0 3 613 403 251 6 11 chr13 3684696 3684877 -116599435 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 613 469 142 0 29 chr13 3684904 3685006 -116599306 + Lx LINE L1 6556 6654 0 3 613 212 143 24 0 chr13 3685092 3685134 -116599178 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 613 1100 82 39 61 chr13 3685281 3685462 -116598850 + B2_Mm2 SINE B2 1 177 -18 3 613 31 44 0 0 chr13 3685462 3685507 -116598805 + AT_rich Low_complexity Low_complexity 1 45 0 3 613 393 277 17 139 chr13 3685907 3686079 -116598233 + B3 SINE B2 35 185 -10 3 613 543 283 8 0 chr13 3686215 3686335 -116597977 - RSINE1 SINE B4 -43 122 2 3 613 180 0 0 0 chr13 3686500 3686520 -116597792 + (T)n Simple_repeat Simple_repeat 1 20 0 4 613 679 102 0 10 chr13 3686729 3686828 -116597484 + L1Md_F2 LINE L1 218 315 -6323 4 613 32705 71 7 3 chr13 3686824 3691752 -116592560 + L1Md_F2 LINE L1 639 5586 -297 4 613 7251 84 4 32 chr13 3691752 3692764 -116591548 + L1Md_F2 LINE L1 5587 6570 -12 4 613 513 80 0 0 chr13 3694203 3694278 -116590034 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 613 213 340 106 0 chr13 3694582 3694676 -116589636 - MIR3 SINE MIR -30 178 75 4 613 327 256 0 0 chr13 3694796 3694972 -116589340 + (TG)n Simple_repeat Simple_repeat 2 177 0 4 613 24 0 0 0 chr13 3695051 3695075 -116589237 + AT_rich Low_complexity Low_complexity 1 24 0 4 613 597 256 138 69 chr13 3695138 3695428 -116588884 - Lx9 LINE L1 -84 7560 7251 4 613 283 320 10 10 chr13 3695431 3695529 -116588783 - B4A SINE B4 -59 233 136 4 613 342 67 0 0 chr13 3695531 3695576 -116588736 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 613 1346 244 15 12 chr13 3695578 3695907 -116588405 - Lx7 LINE L1 -658 6815 6479 4 613 38 51 0 0 chr13 3695925 3695984 -116588328 + AT_rich Low_complexity Low_complexity 1 59 0 4 613 254 296 89 22 chr13 3695984 3696119 -116588193 - Charlie1b DNA MER1_type -267 256 113 4 613 302 354 59 46 chr13 3696299 3696518 -116587794 - MamGypLTR1c LTR Gypsy -3 781 560 4 613 273 57 0 0 chr13 3696739 3696774 -116587538 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 613 236 378 6 47 chr13 3696793 3696965 -116587347 - B4A SINE B4 0 292 128 4 613 5734 171 38 38 chr13 3697075 3698141 -116586171 - RMER1B Other Other 0 1066 1 4 613 353 215 120 139 chr13 3698176 3698392 -116585920 - B3 SINE B2 0 216 5 4 613 494 263 71 126 chr13 3698422 3698731 -116585581 - B4A SINE B4 0 292 1 4 613 355 299 64 58 chr13 3698745 3698933 -116585379 - MamGypLTR1c LTR Gypsy -483 320 132 4 613 333 0 0 0 chr13 3699703 3699740 -116584572 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 613 15508 203 55 70 chr13 3700985 3702128 -116582184 + Lx7 LINE L1 1024 2225 -3661 4 613 1144 75 0 0 chr13 3702128 3702274 -116582038 + B1_Mus1 SINE Alu 1 146 -2 4 613 15508 193 54 70 chr13 3702274 3704119 -116580193 + Lx7 LINE L1 2224 4061 -1819 4 613 1162 71 0 0 chr13 3704119 3704260 -116580052 - B1_Mm SINE Alu -5 142 2 4 613 15508 193 54 70 chr13 3704260 3704818 -116579494 + L1_Mur3 LINE L1 4062 4624 -1256 4 613 288 0 0 0 chr13 3704818 3704850 -116579462 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 613 15508 206 55 72 chr13 3704850 3705797 -116578515 + Lx7 LINE L1 4625 5413 -473 4 613 1168 48 14 0 chr13 3705797 3705942 -116578370 + B1_Mus2 SINE Alu 1 147 0 4 613 10761 251 57 65 chr13 3705942 3706446 -116577866 + Lx7 LINE L1 5414 5884 -2 4 613 901 149 13 26 chr13 3706446 3706598 -116577714 - B1_Mur4 SINE Alu 0 150 1 4 613 5951 245 57 58 chr13 3706598 3707925 -116576387 + Lx7 LINE L1 5885 7242 -454 4 613 321 26 0 0 chr13 3707926 3707964 -116576348 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 613 882 211 70 0 chr13 3708940 3709125 -116575187 + ID_B1 SINE B4 1 198 -26 4 613 301 294 100 8 chr13 3709020 3709140 -116575172 + B1_Mus2 SINE Alu 5 135 -12 4 613 662 246 15 0 chr13 3709143 3709277 -116575035 + B1_Mur2 SINE Alu 3 138 -11 4 613 355 237 40 0 chr13 3709778 3709854 -116574458 + ID4_ SINE ID 5 83 0 4 613 387 0 0 0 chr13 3710412 3710455 -116573857 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 4 613 519 17 0 0 chr13 3710696 3710756 -116573556 + (TCCC)n Simple_repeat Simple_repeat 3 62 0 4 613 257 120 0 39 chr13 3710760 3710812 -116573500 + CT-rich Low_complexity Low_complexity 2 51 0 4 613 612 200 26 0 chr13 3710820 3710935 -116573377 - B1F SINE Alu -29 120 3 4 613 888 204 36 45 chr13 3710980 3711201 -116573111 - Lx7 LINE L1 -13 7683 7465 4 613 405 0 0 0 chr13 3712747 3712792 -116571520 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 613 1004 270 27 4 chr13 3712802 3713062 -116571250 - B4A SINE B4 -25 267 2 4 613 1495 58 5 16 chr13 3714050 3714243 -116570069 - B2_Mm1a SINE B2 0 193 3 4 613 305 277 0 12 chr13 3714549 3714633 -116569679 - Tigger5 DNA MER2_type 0 2406 2324 4 613 879 313 11 18 chr13 3714668 3714954 -116569358 - B4A SINE B4 0 292 9 4 613 441 0 0 0 chr13 3715146 3715195 -116569117 + (CTATT)n Simple_repeat Simple_repeat 3 51 0 4 613 35171 78 15 1 chr13 3715225 3721318 -116562994 - L1Md_F2 LINE L1 -1 6581 404 4 613 326 197 346 3 chr13 3721323 3721476 -116562836 - Lx2B LINE L1 0 7000 6828 4 613 633 293 58 16 chr13 3721694 3721963 -116562349 - Lx8 LINE L1 -373 5930 5620 4 613 342 0 0 0 chr13 3721969 3722007 -116562305 + (TTA)n Simple_repeat Simple_repeat 2 39 0 4 613 391 347 124 0 chr13 3722068 3722261 -116562051 - Tigger5 DNA MER2_type -2166 240 24 4 613 22 0 0 0 chr13 3722456 3722478 -116561834 + AT_rich Low_complexity Low_complexity 1 22 0 4 613 439 301 9 0 chr13 3722481 3722594 -116561718 + B3A SINE B2 26 139 -59 4 613 258 32 0 0 chr13 3722614 3722645 -116561667 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 613 31 44 0 0 chr13 3722656 3722701 -116561611 + AT_rich Low_complexity Low_complexity 1 45 0 4 613 292 218 185 82 chr13 3723936 3723971 -116560341 - B4A SINE B4 -47 245 97 4 613 489 260 0 0 chr13 3723971 3724071 -116560241 - PB1D10 SINE Alu -6 111 12 4 613 261 282 28 0 chr13 3724114 3724185 -116560127 - BC1_Mm scRNA scRNA -65 87 15 4 613 1860 199 72 34 chr13 3724256 3724755 -116559557 - RLTR11A LTR ERVK -1 527 10 4 613 181 242 61 0 chr13 3724755 3724821 -116559491 - MIRb SINE MIR -94 174 105 4 613 361 263 8 66 chr13 3724865 3724987 -116559325 - MTEb LTR MaLR -26 353 239 4 613 286 208 25 25 chr13 3726282 3726361 -116557951 + MIR SINE MIR 114 192 -70 4 613 508 55 53 35 chr13 3726521 3726634 -116557678 + (TCTCTG)n Simple_repeat Simple_repeat 6 120 0 4 613 229 182 0 0 chr13 3726716 3726760 -116557552 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 613 605 256 88 98 chr13 3726811 3727106 -116557206 - B4 SINE B4 0 292 1 4 613 361 207 134 0 chr13 3728048 3728130 -116556182 + B1F SINE Alu 28 120 -29 4 613 443 324 34 11 chr13 3728276 3728451 -116555861 - MIR SINE MIR -66 196 18 4 613 891 298 24 57 chr13 3729016 3729312 -116555000 + B4A SINE B4 1 286 -6 4 613 515 191 7 0 chr13 3729317 3729464 -116554848 + (CA)n Simple_repeat Simple_repeat 2 149 0 4 613 355 104 119 0 chr13 3729464 3729531 -116554781 + HAL1-3A_ME LINE L1 1976 2050 -808 4 613 223 162 86 12 chr13 3731232 3731247 -116553065 + A-rich Low_complexity Low_complexity 5 19 0 4 613 1160 61 0 26 chr13 3731247 3731398 -116552914 + B1_Mus2 SINE Alu 1 147 0 4 613 223 162 86 12 chr13 3731398 3731463 -116552849 + A-rich Low_complexity Low_complexity 20 91 0 4 613 39521 41 1 14 chr13 3731938 3738139 -116546173 - L1Md_A LINE L1 0 6582 478 4 613 386 267 65 15 chr13 3738511 3738736 -116545576 + L1MA4 LINE L1 5627 5930 -370 4 613 1085 119 6 0 chr13 3738996 3739156 -116545156 - B2_Mm1t SINE B2 -31 162 2 4 613 304 256 66 33 chr13 3739158 3739279 -116545033 + L1ME3 LINE L1 5779 5903 -259 4 613 304 287 132 0 chr13 3739342 3739478 -116544834 + L1ME3 LINE L1 5914 6067 -97 4 613 337 266 172 77 chr13 3739606 3739903 -116544409 + L1MC4a LINE L1 6407 6731 -1151 4 613 435 38 0 0 chr13 3739909 3739962 -116544350 + (TC)n Simple_repeat Simple_repeat 1 53 0 4 613 378 0 0 0 chr13 3739962 3740003 -116544309 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 613 322 333 29 23 chr13 3740006 3740178 -116544134 - L1MC4 LINE L1 -251 7791 7619 4 613 304 255 117 10 chr13 3740180 3740283 -116544029 + MLT1G LTR MaLR 1 114 -477 4 613 225 392 11 0 chr13 3741130 3741306 -116543006 + (TG)n Simple_repeat Simple_repeat 1 178 0 4 613 306 73 0 0 chr13 3741827 3741868 -116542444 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 613 270 188 54 76 chr13 3743552 3743644 -116540668 - ORR1E LTR MaLR 0 379 290 4 613 869 181 0 6 chr13 3743929 3744107 -116540205 + GA-rich Low_complexity Low_complexity 4 180 0 4 613 349 320 32 58 chr13 3744108 3744297 -116540015 - ORR1E LTR MaLR -168 191 8 4 613 225 94 0 0 chr13 3745151 3745183 -116539129 + (TCC)n Simple_repeat Simple_repeat 2 33 0 4 613 1022 239 13 13 chr13 3745188 3745413 -116538899 - B4 SINE B4 -52 240 16 4 613 258 105 0 0 chr13 3745549 3745587 -116538725 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 613 197 239 122 22 chr13 3745850 3745940 -116538372 + MIRb SINE MIR 47 145 -123 4 613 574 257 22 0 chr13 3746754 3746890 -116537422 - B1F SINE Alu -8 141 3 4 613 180 0 0 0 chr13 3747657 3747677 -116536635 + (TAA)n Simple_repeat Simple_repeat 3 22 0 4 613 229 318 15 0 chr13 3747971 3748037 -116536275 + B3A SINE B2 106 172 -26 4 613 309 227 278 21 chr13 3748104 3748248 -116536064 - B3A SINE B2 -17 181 1 4 613 251 330 26 35 chr13 3748506 3748619 -116535693 + PB1D9 SINE Alu 2 113 -7 4 613 317 289 0 13 chr13 3748654 3748731 -116535581 + ID4_ SINE ID 5 80 -3 4 613 690 262 33 5 chr13 3749586 3749770 -116534542 - ID_B1 SINE B4 -34 190 2 4 613 324 0 0 0 chr13 3749799 3749835 -116534477 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 613 329 289 27 42 chr13 3750073 3750257 -116534055 + MIRc SINE MIR 9 194 -74 4 613 864 289 10 5 chr13 3750534 3750739 -116533573 - ID_B1 SINE B4 -17 207 2 4 613 2077 148 34 18 chr13 3750778 3751176 -116533136 - MTB_Mm LTR MaLR -13 394 1 4 613 229 298 42 42 chr13 3751191 3751310 -116533002 + LTR88a LTR Gypsy 636 754 -62 4 613 229 260 48 39 chr13 3751210 3751314 -116532998 + LTR88b LTR Gypsy? 676 780 -57 4 613 270 0 0 0 chr13 3751420 3751450 -116532862 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 613 378 0 0 0 chr13 3751450 3751491 -116532821 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 613 307 312 248 0 chr13 3752184 3752341 -116531971 + L2 LINE L2 2625 2820 -599 5 613 691 281 63 74 chr13 3752345 3752614 -116531698 + B4A SINE B4 14 279 -13 5 613 2440 83 3 58 chr13 3753135 3753481 -116530831 - ORR1A2 LTR MaLR 0 327 1 5 613 343 356 85 23 chr13 3753907 3754121 -116530191 + MLT1F2 LTR MaLR 204 476 -151 5 613 1144 246 26 84 chr13 3754121 3754512 -116529800 + MTE2b LTR MaLR 1 368 -11 5 613 247 297 11 11 chr13 3754833 3754925 -116529387 - MER5B DNA MER1_type -58 120 29 5 613 1546 257 95 78 chr13 3755018 3755660 -116528652 - MER82 DNA MER2_type 0 653 1 5 613 382 301 88 7 chr13 3756301 3756438 -116527874 + B1F SINE Alu 1 148 -1 5 613 376 297 22 0 chr13 3756990 3757081 -116527231 - RSINE1 SINE B4 -70 95 3 5 613 832 201 111 20 chr13 3757101 3757299 -116527013 - B3 SINE B2 0 216 1 5 613 231 271 0 0 chr13 3757299 3757358 -116526954 + CT-rich Low_complexity Low_complexity 3 61 0 5 613 486 257 18 0 chr13 3757359 3757472 -116526840 - PB1D10 SINE Alu 0 117 3 5 613 208 121 0 0 chr13 3757479 3757512 -116526800 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 613 1003 252 39 111 chr13 3759849 3760255 -116524057 - MTE2a LTR MaLR -2 377 1 5 613 233 231 171 9 chr13 3760811 3760916 -116523396 - L2 LINE L2 -574 2845 2724 5 613 807 310 71 52 chr13 3760983 3761408 -116522904 - MT2A LTR ERVL -100 433 1 5 613 1290 255 38 33 chr13 3761740 3762105 -116522207 + MTE2b LTR MaLR 5 371 -8 5 613 2588 93 14 3 chr13 3762837 3763202 -116521110 + L1_Mus3 LINE L1 6270 6638 0 5 613 811 270 4 53 chr13 3763282 3763509 -116520803 - ID_B1 SINE B4 -7 217 2 5 613 180 0 0 0 chr13 3763580 3763600 -116520712 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 613 516 271 15 15 chr13 3763655 3763790 -116520522 - B1F SINE Alu -14 135 1 5 613 256 263 0 0 chr13 3763811 3763868 -116520444 - RSINE1 SINE B4 -105 60 4 5 613 716 246 48 11 chr13 3764301 3764473 -116519839 + B3A SINE B2 2 182 -16 5 613 189 0 0 0 chr13 3764473 3764494 -116519818 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 5 613 716 246 48 11 chr13 3764494 3764510 -116519802 + B3A SINE B2 183 197 -1 5 613 273 325 24 0 chr13 3765691 3765774 -116518538 + PB1D10 SINE Alu 5 89 -28 5 613 22 0 0 0 chr13 3765783 3765805 -116518507 + AT_rich Low_complexity Low_complexity 1 22 0 5 613 648 70 0 0 chr13 3766851 3766937 -116517375 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 5 613 412 183 0 0 chr13 3766965 3767036 -116517276 - ID_B1 SINE B4 -11 213 143 5 613 378 61 0 0 chr13 3767060 3767109 -116517203 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 613 909 251 73 16 chr13 3767128 3767375 -116516937 - B4 SINE B4 -27 265 5 5 613 302 325 0 0 chr13 3767370 3767453 -116516859 - PB1D10 SINE Alu -34 83 1 5 613 439 297 107 32 chr13 3768610 3768826 -116515486 - B4A SINE B4 -59 233 2 5 613 240 86 0 0 chr13 3769202 3769237 -116515075 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 613 243 0 0 0 chr13 3769237 3769263 -116515049 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 613 277 326 61 10 chr13 3771048 3771147 -116513165 + PB1D10 SINE Alu 7 110 -7 5 613 264 266 25 12 chr13 3771159 3771239 -116513073 + ID4_ SINE ID 1 81 -2 5 613 542 244 21 3 chr13 3771246 3771534 -116512778 + GA-rich Low_complexity Low_complexity 1 293 0 5 613 219 69 0 0 chr13 3772021 3772050 -116512262 + (TGGGGG)n Simple_repeat Simple_repeat 4 32 0 5 613 321 234 16 0 chr13 3772365 3772429 -116511883 - B4 SINE B4 -2 290 226 5 613 263 203 0 15 chr13 3772435 3772500 -116511812 + CT-rich Low_complexity Low_complexity 3 66 0 5 613 579 315 75 36 chr13 3772558 3772838 -116511474 - B4A SINE B4 0 292 2 5 613 774 234 60 41 chr13 3772842 3773060 -116511252 - B4 SINE B4 -69 223 2 5 613 365 102 0 17 chr13 3773271 3773331 -116510981 + (GGGA)n Simple_repeat Simple_repeat 3 61 0 5 613 291 157 0 0 chr13 3773331 3773382 -116510930 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 613 209 189 0 54 chr13 3773383 3773439 -116510873 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 5 613 405 211 0 0 chr13 3773452 3773575 -116510737 + (TAGA)n Simple_repeat Simple_repeat 2 124 0 5 613 530 291 57 53 chr13 3774355 3774602 -116509710 + MLT1B LTR MaLR 131 378 -12 5 613 631 267 18 24 chr13 3774733 3774898 -116509414 + RSINE1 SINE B4 2 165 0 5 613 220 250 0 0 chr13 3774914 3774958 -116509354 + (TAA)n Simple_repeat Simple_repeat 3 46 0 5 613 259 250 50 0 chr13 3775144 3775224 -116509088 - MLT1D LTR MaLR -362 143 60 5 613 204 205 0 0 chr13 3775584 3775623 -116508689 + MIRc SINE MIR 116 154 -114 5 613 810 264 127 48 chr13 3775630 3776024 -116508288 + MER57C2 LTR ERV1 4 428 -6 5 613 690 280 72 5 chr13 3776294 3776488 -116507824 + B3 SINE B2 2 208 -8 5 613 387 0 0 0 chr13 3777517 3777560 -116506752 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 613 285 51 0 0 chr13 3777560 3777598 -116506714 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 613 742 333 19 22 chr13 3777958 3778225 -116506087 + B4 SINE B4 1 266 -26 5 613 250 261 15 0 chr13 3778377 3778442 -116505870 - MIR SINE MIR -108 100 35 5 613 338 275 121 0 chr13 3778768 3778859 -116505453 + RSINE1 SINE B4 3 104 -61 5 613 282 56 0 0 chr13 3779194 3779230 -116505082 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 613 794 106 8 0 chr13 3779531 3779654 -116504658 + (TTCC)n Simple_repeat Simple_repeat 4 127 0 5 613 602 254 331 18 chr13 3779706 3779975 -116504337 - MTEa LTR MaLR -8 371 17 5 613 210 195 0 0 chr13 3780355 3780396 -116503916 + PB1D10 SINE Alu 71 111 -6 5 613 488 253 229 6 chr13 3780481 3780656 -116503656 - ID_B1 SINE B4 -8 216 3 5 613 921 246 43 5 chr13 3780675 3780883 -116503429 - B3 SINE B2 0 216 1 5 613 752 153 0 7 chr13 3782251 3782389 -116501923 + CT-rich Low_complexity Low_complexity 2 138 0 5 613 623 278 6 0 chr13 3782492 3782672 -116501640 - L1MB8 LINE L1 -231 5947 5767 5 613 372 355 32 39 chr13 3782820 3783104 -116501208 - B4A SINE B4 -10 282 1 5 613 226 337 36 0 chr13 3783778 3783861 -116500451 + B1F1 SINE Alu 9 94 -55 5 613 204 67 0 0 chr13 3784104 3784134 -116500178 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 5 613 524 296 71 55 chr13 3784456 3784638 -116499674 - ID_B1 SINE B4 -38 186 2 5 613 689 300 75 19 chr13 3785562 3785973 -116498339 + L1MA6 LINE L1 5818 6251 -49 5 613 927 332 83 21 chr13 3786436 3786870 -116497442 - MLT1F LTR MaLR -87 461 1 5 613 227 376 0 0 chr13 3786878 3786979 -116497333 + L2 LINE L2 1966 2066 -1353 5 613 254 301 87 31 chr13 3787279 3787406 -116496906 + MLT1A1 LTR MaLR 268 401 -7 5 613 642 317 24 44 chr13 3788045 3788339 -116495973 - B4 SINE B4 -1 291 4 5 613 396 363 74 44 chr13 3788359 3788722 -116495590 + MLT1A LTR MaLR 1 374 0 5 613 396 135 0 0 chr13 3789393 3789467 -116494845 + (GA)n Simple_repeat Simple_repeat 1 74 0 5 613 228 260 0 40 chr13 3789482 3789558 -116494754 + GA-rich Low_complexity Low_complexity 5 77 0 5 613 405 364 100 27 chr13 3790025 3790395 -116493917 + Arthur1B DNA Tip100 315 711 -514 5 613 268 266 0 30 chr13 3790413 3790479 -116493833 + polypyrimidine Low_complexity Low_complexity 2 65 0 5 613 211 208 0 40 chr13 3790479 3790529 -116493783 + (TATG)n Simple_repeat Simple_repeat 4 51 0 5 613 251 271 0 0 chr13 3790553 3790601 -116493711 - B4 SINE B4 -13 279 232 5 613 424 233 24 65 chr13 3790662 3790786 -116493526 - RSINE1 SINE B4 -5 160 42 5 613 631 272 79 5 chr13 3790829 3791032 -116493280 - B4 SINE B4 -72 220 3 5 613 252 0 0 0 chr13 3791189 3791217 -116493095 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 5 613 306 0 0 0 chr13 3791471 3791505 -116492807 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 613 709 169 39 0 chr13 3792560 3792690 -116491622 - B1_Mur1 SINE Alu -1 148 14 5 613 225 65 0 0 chr13 3792690 3792721 -116491591 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 613 726 12 0 0 chr13 3794809 3794892 -116489420 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 5 613 1019 88 15 0 chr13 3794892 3795028 -116489284 - B1_Mus2 SINE Alu -9 138 1 5 613 573 293 54 56 chr13 3795045 3795410 -116488902 + ORR1E LTR MaLR 3 377 -2 5 613 857 274 26 86 chr13 3796483 3796886 -116487426 - MLT1B LTR MaLR 0 467 24 5 613 3009 90 2 26 chr13 3797297 3797720 -116486592 + L1_Mus2 LINE L1 6153 6565 -1 5 613 540 0 0 0 chr13 3798490 3798550 -116485762 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 613 294 73 0 0 chr13 3798577 3798618 -116485694 + (CCAA)n Simple_repeat Simple_repeat 2 42 0 5 613 216 97 0 0 chr13 3799263 3799294 -116485018 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 5 613 432 0 0 0 chr13 3799761 3799809 -116484503 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 614 451 338 12 12 chr13 3801289 3801451 -116482861 + RSINE1 SINE B4 3 164 -1 5 614 29 28 0 0 chr13 3801462 3801498 -116482814 + AT_rich Low_complexity Low_complexity 1 36 0 5 614 431 228 0 0 chr13 3801500 3801579 -116482733 + ID4_ SINE ID 5 83 0 5 614 182 259 0 36 chr13 3801712 3801768 -116482544 + MIR SINE MIR 119 172 -90 5 614 199 218 0 52 chr13 3801907 3801965 -116482347 - MIR3 SINE MIR -50 158 104 5 614 240 35 0 0 chr13 3802256 3802285 -116482027 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 614 569 273 25 19 chr13 3805537 3805694 -116478618 + RSINE1 SINE B4 8 165 0 6 614 356 143 0 14 chr13 3805697 3805768 -116478544 + (CA)n Simple_repeat Simple_repeat 2 71 0 6 614 398 266 80 40 chr13 3805932 3806092 -116478220 - B3 SINE B2 0 216 48 6 614 327 85 0 0 chr13 3806093 3806140 -116478172 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 614 521 312 0 25 chr13 3806152 3806313 -116477999 - RSINE1 SINE B4 -6 159 3 6 614 1292 184 9 0 chr13 3807027 3807250 -116477062 - URR1B DNA MER1_type 0 225 1 6 614 24 53 0 0 chr13 3807297 3807335 -116476977 + AT_rich Low_complexity Low_complexity 1 38 0 6 614 339 325 119 28 chr13 3807350 3807568 -116476744 + B4 SINE B4 26 263 -29 6 614 1009 178 47 47 chr13 3807627 3807839 -116476473 - B3 SINE B2 -4 212 1 6 614 508 311 116 66 chr13 3807869 3808479 -116475833 - Charlie1a DNA MER1_type -45 1410 770 6 614 295 312 32 0 chr13 3808891 3809048 -116475264 - Charlie1a DNA MER1_type -689 766 605 6 614 230 294 99 53 chr13 3809076 3809227 -116475085 - Charlie1a DNA MER1_type -926 529 372 6 614 428 257 55 0 chr13 3809229 3809338 -116474974 + PB1D9 SINE Alu 1 115 -5 6 614 214 170 0 19 chr13 3809338 3809378 -116474934 + (CCAA)n Simple_repeat Simple_repeat 3 41 0 6 614 1413 86 16 0 chr13 3809378 3809564 -116474748 + B2_Mm2 SINE B2 2 190 -5 6 614 214 170 0 19 chr13 3809564 3809577 -116474735 + (CCAA)n Simple_repeat Simple_repeat 2 14 0 6 614 32157 83 11 21 chr13 3809784 3814729 -116469583 + L1Md_F2 LINE L1 392 5301 -582 6 614 1707 21 5 0 chr13 3814729 3814921 -116469391 + B2_Mm1a SINE B2 1 193 0 6 614 32157 73 10 20 chr13 3814921 3815222 -116469090 + L1Md_F2 LINE L1 5302 5586 -297 6 614 7280 79 31 3 chr13 3815223 3816191 -116468121 + L1Md_F2 LINE L1 5588 6582 0 6 614 626 291 24 6 chr13 3818628 3818794 -116465518 + ID_B1 SINE B4 56 224 0 6 614 1118 102 0 0 chr13 3819110 3819257 -116465055 - B1_Mus1 SINE Alu 0 148 2 6 614 589 263 153 0 chr13 3820363 3820553 -116463759 - ID_B1 SINE B4 -2 222 4 6 614 270 206 0 0 chr13 3820736 3820799 -116463513 + (TATATG)n Simple_repeat Simple_repeat 1 63 0 6 614 3361 65 5 11 chr13 3821847 3822282 -116462030 + L1_Mus1 LINE L1 6135 6566 -1 6 614 1068 218 5 0 chr13 3823848 3824054 -116460258 + B3 SINE B2 2 208 -8 6 614 209 245 235 0 chr13 3824717 3824819 -116459493 + MIRb SINE MIR 112 237 -31 6 614 551 272 35 53 chr13 3825475 3825646 -116458666 - B3A SINE B2 -27 171 4 6 614 1390 206 112 70 chr13 3825743 3825792 -116458520 - MTD LTR MaLR 0 419 369 6 614 2194 137 98 0 chr13 3825792 3826151 -116458161 - ORR1B1 LTR MaLR 0 394 1 6 614 1390 206 112 70 chr13 3826151 3826503 -116457809 - MTD LTR MaLR -51 368 1 6 614 504 0 0 0 chr13 3827606 3827662 -116456650 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 6 614 1163 44 0 0 chr13 3827662 3827799 -116456513 - B1_Mm SINE Alu -10 137 1 6 614 192 27 53 26 chr13 3828584 3828622 -116455690 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 614 227 338 37 24 chr13 3828625 3828707 -116455605 + B1_Mur4 SINE Alu 1 83 -67 6 614 705 291 10 39 chr13 3828635 3828839 -116455473 + B4 SINE B4 95 292 0 6 614 297 222 16 0 chr13 3829027 3829090 -116455222 - MERVL_2A-int LTR ERVL -1142 4619 4556 6 614 383 238 105 16 chr13 3829094 3829235 -116455077 + MTD LTR MaLR 234 405 -14 6 614 1092 101 0 0 chr13 3829283 3829461 -116454851 + (TC)n Simple_repeat Simple_repeat 1 178 0 6 614 24 0 0 0 chr13 3829576 3829600 -116454712 + AT_rich Low_complexity Low_complexity 1 24 0 6 614 1048 153 196 0 chr13 3830228 3830417 -116453895 - URR1A DNA MER1_type 0 226 1 6 614 530 316 82 31 chr13 3830473 3830669 -116453643 + ID_B1 SINE B4 14 219 -5 6 614 1132 242 76 35 chr13 3831699 3832016 -116452296 - MTD LTR MaLR -15 404 75 6 614 1252 68 0 11 chr13 3832016 3832194 -116452118 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 6 614 832 145 6 6 chr13 3832195 3832355 -116451957 + CT-rich Low_complexity Low_complexity 2 161 0 6 614 726 70 0 0 chr13 3832379 3832479 -116451833 - B2_Mm2 SINE B2 -94 101 2 6 614 282 182 18 0 chr13 3832482 3832537 -116451775 - MTD LTR MaLR -345 76 21 6 614 279 0 0 0 chr13 3832537 3832568 -116451744 + (CAA)n Simple_repeat Simple_repeat 3 33 0 6 614 240 221 92 98 chr13 3833809 3833881 -116450431 - ID4_ SINE ID -48 104 39 6 614 225 0 0 0 chr13 3833881 3833906 -116450406 + (CAGG)n Simple_repeat Simple_repeat 2 26 0 6 614 240 219 99 99 chr13 3833906 3833937 -116450375 - ID4_ SINE ID -45 38 4 6 614 206 135 27 0 chr13 3833987 3834024 -116450288 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 614 685 277 113 51 chr13 3834025 3834299 -116450013 - B4A SINE B4 -1 291 1 6 614 899 227 43 10 chr13 3834435 3834644 -116449668 - Lx2B LINE L1 -4 6996 6781 6 614 608 121 80 10 chr13 3834709 3834809 -116449503 + B1_Mus2 SINE Alu 41 147 0 6 614 285 169 0 0 chr13 3834809 3834868 -116449444 + GA-rich Low_complexity Low_complexity 3 61 0 6 614 347 242 41 35 chr13 3838301 3838472 -116445840 + (TATG)n Simple_repeat Simple_repeat 2 173 0 6 614 368 98 0 32 chr13 3839018 3839081 -116445231 + (TCCC)n Simple_repeat Simple_repeat 2 62 0 6 614 1057 65 41 0 chr13 3839113 3839283 -116445029 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 6 614 582 15 0 0 chr13 3839303 3839370 -116444942 + (TA)n Simple_repeat Simple_repeat 2 68 0 6 614 753 43 0 0 chr13 3839372 3839464 -116444848 - B2_Mm2 SINE B2 -103 92 1 6 614 375 158 19 0 chr13 3839465 3839534 -116444778 - MTC LTR MaLR -329 78 8 6 614 214 233 100 88 chr13 3840779 3840827 -116443485 - ID4_ SINE ID 0 83 39 6 614 225 0 0 0 chr13 3840827 3840852 -116443460 + (CAGG)n Simple_repeat Simple_repeat 2 26 0 6 614 214 233 100 88 chr13 3840852 3840883 -116443429 - ID4_ SINE ID -45 38 4 6 614 206 135 27 0 chr13 3840933 3840970 -116443342 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 614 769 272 40 58 chr13 3840971 3841197 -116443115 - B4A SINE B4 -1 291 70 6 614 320 240 156 8 chr13 3841322 3841444 -116442868 - L1M4b LINE L1 -4977 2357 2218 6 614 10036 106 10 0 chr13 3841478 3842815 -116441497 + MERVK26-int LTR ERVK 5566 6915 -4 6 614 34168 87 9 15 chr13 3842828 3844931 -116439381 + L1Md_F3 LINE L1 441 2534 -3349 6 614 4642 45 2 5 chr13 3844931 3845492 -116438820 - L1Md_F2 LINE L1 0 6582 6024 6 614 34168 57 4 6 chr13 3845492 3848556 -116435756 + L1Md_F3 LINE L1 2535 5586 -297 6 614 8436 34 1 4 chr13 3848557 3849556 -116434756 + L1Md_F3 LINE L1 5588 6583 -1 6 614 2071 244 47 71 chr13 3849564 3850222 -116434090 + RLTR26 LTR ERVK 1 642 0 6 614 982 188 23 5 chr13 3850284 3850498 -116433814 - Lx2B LINE L1 -2 6998 6781 6 614 223 94 0 0 chr13 3850501 3850533 -116433779 + PB1D9 SINE Alu 24 55 -65 6 614 549 162 71 0 chr13 3850551 3850650 -116433662 + B1_Mus2 SINE Alu 41 146 -1 6 614 1190 100 0 6 chr13 3850659 3850742 -116433570 + (GAA)n Simple_repeat Simple_repeat 1 83 0 6 614 1161 108 0 0 chr13 3850742 3850918 -116433394 + (GGA)n Simple_repeat Simple_repeat 3 178 0 6 614 1190 100 0 6 chr13 3850918 3851015 -116433297 + (GAA)n Simple_repeat Simple_repeat 3 99 0 6 614 608 198 24 12 chr13 3851018 3851187 -116433125 + GA-rich Low_complexity Low_complexity 10 180 0 6 614 202 87 21 21 chr13 3851609 3851656 -116432656 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 6 614 1122 89 0 0 chr13 3851657 3851803 -116432509 - B1_Mus1 SINE Alu 0 148 3 6 614 338 284 41 12 chr13 3854616 3854787 -116429525 + (TATG)n Simple_repeat Simple_repeat 2 177 0 6 614 301 323 92 18 chr13 3855301 3855465 -116428847 - HAL1-3A_ME LINE L1 -620 2238 2063 6 614 770 251 61 11 chr13 3856272 3856453 -116427859 + ID_B1 SINE B4 34 223 -1 6 614 242 267 17 0 chr13 3856608 3856668 -116427644 + Charlie18a DNA MER1_type 282 342 0 6 614 519 317 8 0 chr13 3857372 3857495 -116426817 - ID_B1 SINE B4 -97 127 4 6 614 835 290 102 4 chr13 3857522 3857778 -116426534 - MER34A LTR ERV1 0 571 291 6 614 492 18 0 0 chr13 3858712 3858769 -116425543 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 614 212 239 143 78 chr13 3859003 3859080 -116425232 - PB1D7 SINE Alu -38 82 1 6 614 478 205 42 0 chr13 3859398 3859503 -116424809 - ID_B1 SINE B4 -164 128 15 6 614 318 284 27 0 chr13 3859438 3859512 -116424800 - ID4_ SINE ID -2 81 6 6 614 945 161 0 0 chr13 3859653 3859821 -116424491 + CT-rich Low_complexity Low_complexity 2 169 0 6 614 842 81 0 0 chr13 3859821 3859932 -116424380 - B1_Mus2 SINE Alu 0 147 37 6 614 293 233 75 28 chr13 3860421 3860527 -116423785 + PB1D7 SINE Alu 1 111 -9 6 614 366 349 0 0 chr13 3860554 3860703 -116423609 + RSINE1 SINE B4 4 152 -13 6 614 316 138 15 15 chr13 3860818 3860884 -116423428 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 614 606 294 48 29 chr13 3860901 3861174 -116423138 - B4A SINE B4 -14 278 1 6 614 714 189 56 66 chr13 3861181 3861379 -116422933 - B3A SINE B2 -1 197 2 6 614 276 30 0 0 chr13 3861462 3861495 -116422817 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 614 423 0 0 0 chr13 3861495 3861541 -116422771 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 614 278 266 37 86 chr13 3862006 3862183 -116422129 + MIRc SINE MIR 3 171 -105 6 614 1273 88 5 5 chr13 3863379 3863563 -116420749 - L1_Mus1 LINE L1 -534 6033 5850 6 614 3687 59 0 2 chr13 3863563 3864019 -116420293 + L1_Mus1 LINE L1 6111 6565 -2 6 614 244 375 48 9 chr13 3864295 3864400 -116419912 - ORR1E LTR MaLR -247 112 4 6 614 234 349 0 0 chr13 3864400 3864462 -116419850 - ID4 SINE ID -20 63 2 6 614 1141 49 0 0 chr13 3864491 3864633 -116419679 - B1_Mus1 SINE Alu 0 148 7 6 614 653 212 6 53 chr13 3864633 3864658 -116419654 - ID_B1 SINE B4 0 222 64 6 614 336 48 0 0 chr13 3864681 3864723 -116419589 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 614 479 285 131 0 chr13 3864725 3864855 -116419457 - RSINE1 SINE B4 -16 149 3 7 614 684 274 78 16 chr13 3866000 3866193 -116418119 - ID_B1 SINE B4 -19 205 1 7 614 715 243 92 22 chr13 3867584 3867769 -116416543 - ID_B1 SINE B4 -23 201 4 7 614 1241 47 0 0 chr13 3867910 3868058 -116416254 - B1_Mus1 SINE Alu 0 148 1 7 614 29 28 0 0 chr13 3868061 3868097 -116416215 + AT_rich Low_complexity Low_complexity 1 36 0 7 614 359 255 99 46 chr13 3868833 3868985 -116415327 - MLT1A1 LTR MaLR -2 406 247 7 614 760 277 93 32 chr13 3869267 3869513 -116414799 - B4A SINE B4 -13 279 19 7 614 237 275 41 71 chr13 3869529 3869627 -116414685 - MLT1A1 LTR MaLR -270 95 1 7 614 345 270 71 39 chr13 3870210 3870364 -116413948 + MER113 DNA MER1_type 290 448 -73 7 614 714 288 150 22 chr13 3871158 3871385 -116412927 + B4 SINE B4 3 258 -34 7 614 184 0 167 0 chr13 3871406 3871442 -116412870 + CT-rich Low_complexity Low_complexity 1 42 0 7 614 2264 95 6 66 chr13 3872032 3872380 -116411932 - ORR1A2 LTR MaLR 0 327 1 7 614 545 326 7 0 chr13 3872456 3872591 -116411721 + RSINE1 SINE B4 2 137 -28 7 614 22 56 0 0 chr13 3872648 3872684 -116411628 + AT_rich Low_complexity Low_complexity 1 36 0 7 614 261 0 0 0 chr13 3872895 3872924 -116411388 + (T)n Simple_repeat Simple_repeat 1 29 0 7 614 1180 68 0 0 chr13 3872924 3873070 -116411242 - B1_Mus2 SINE Alu 0 147 2 7 614 459 207 62 18 chr13 3873073 3873186 -116411126 + MTE2a LTR MaLR 2 119 -300 7 614 237 65 0 0 chr13 3873186 3873217 -116411095 + (ATG)n Simple_repeat Simple_repeat 2 32 0 7 614 888 156 2 3 chr13 3873217 3873366 -116410946 - B1_Mus1 SINE Alu -1 147 1 7 614 313 260 76 48 chr13 3873366 3873470 -116410842 + MTE2a LTR MaLR 84 190 -189 7 614 456 241 71 98 chr13 3873409 3873484 -116410828 + MT2B LTR ERVL 86 155 -446 7 614 1055 69 13 34 chr13 3873484 3873619 -116410693 + B1_Mus2 SINE Alu 2 138 -9 7 614 315 0 0 0 chr13 3873619 3873654 -116410658 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 7 614 1055 69 13 34 chr13 3873654 3873667 -116410645 + B1_Mus2 SINE Alu 139 147 0 7 614 551 218 33 2 chr13 3873698 3873827 -116410485 + MTE2a LTR MaLR 258 379 0 7 614 1503 222 65 12 chr13 3874108 3874449 -116409863 + MTD LTR MaLR 9 374 -45 7 614 414 320 133 68 chr13 3875017 3875295 -116409017 - MLT1F LTR MaLR -252 296 1 7 614 456 271 61 9 chr13 3877506 3877733 -116406579 + B4 SINE B4 1 266 -26 7 614 353 22 22 0 chr13 3877733 3877779 -116406533 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 614 586 268 44 57 chr13 3877797 3878009 -116406303 + MLT1A1 LTR MaLR 161 403 -5 7 614 247 280 150 20 chr13 3878029 3878182 -116406130 + L1MC1 LINE L1 5883 6055 -278 7 614 323 262 74 46 chr13 3878450 3878558 -116405754 - B4A SINE B4 -129 163 53 7 614 593 222 0 0 chr13 3878562 3878670 -116405642 - RSINE1 SINE B4 -55 110 3 7 614 345 239 20 58 chr13 3878670 3878774 -116405538 - MLT1A1 LTR MaLR -255 119 21 7 614 372 305 95 11 chr13 3879709 3879898 -116404414 - L1MC5 LINE L1 -759 7202 6998 7 614 503 274 30 43 chr13 3879964 3880128 -116404184 - RSINE1 SINE B4 -2 163 2 7 614 580 241 21 55 chr13 3880792 3880937 -116403375 + B1F1 SINE Alu 7 146 -3 7 614 266 247 66 66 chr13 3880946 3881037 -116403275 + MLT1A0 LTR MaLR 120 210 -155 7 614 22 35 0 0 chr13 3881828 3881857 -116402455 + AT_rich Low_complexity Low_complexity 1 29 0 7 614 201 74 0 0 chr13 3882283 3882310 -116402002 + (TTCCC)n Simple_repeat Simple_repeat 5 31 0 7 614 417 20 0 0 chr13 3882511 3882561 -116401751 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 614 263 228 18 0 chr13 3883105 3883162 -116401150 + (CGA)n Simple_repeat Simple_repeat 3 60 0 7 614 211 205 0 0 chr13 3883164 3883203 -116401109 + GA-rich Low_complexity Low_complexity 5 43 0 7 614 302 282 5 0 chr13 3883941 3884011 -116400301 - PB1D7 SINE Alu -6 114 40 7 614 27 0 0 0 chr13 3884765 3884792 -116399520 + AT_rich Low_complexity Low_complexity 1 27 0 7 614 192 77 0 0 chr13 3885031 3885057 -116399255 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 614 1113 72 0 0 chr13 3885057 3885195 -116399117 - B1_Mus1 SINE Alu -10 138 1 7 614 213 200 65 22 chr13 3886329 3886375 -116397937 + L2b LINE L2 3323 3370 -5 7 614 511 209 17 60 chr13 3888883 3889000 -116395312 + PB1D9 SINE Alu 2 113 -7 7 614 830 45 0 0 chr13 3889852 3889963 -116394349 + B1_Mus1 SINE Alu 38 148 0 7 614 441 103 0 0 chr13 3890383 3890451 -116393861 + (CAAAC)n Simple_repeat Simple_repeat 2 69 0 7 614 180 0 0 0 chr13 3890579 3890599 -116393713 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 7 614 212 239 22 0 chr13 3894512 3894558 -116389754 + GA-rich Low_complexity Low_complexity 5 51 0 7 614 333 0 0 0 chr13 3897062 3897099 -116387213 + (TTA)n Simple_repeat Simple_repeat 3 39 0 7 614 377 317 61 14 chr13 3897099 3897246 -116387066 - RSINE1 SINE B4 -9 156 3 7 614 470 254 0 44 chr13 3897386 3897567 -116386745 + (CACTG)n Simple_repeat Simple_repeat 3 175 0 7 614 310 232 3 47 chr13 3897675 3897983 -116386329 + (CACTG)n Simple_repeat Simple_repeat 1 294 0 7 614 26 30 0 0 chr13 3898492 3898525 -116385787 + AT_rich Low_complexity Low_complexity 1 33 0 7 614 298 357 27 11 chr13 3900008 3900192 -116384120 + ERVL-E-int LTR ERVL 3740 3926 -1741 7 614 245 302 33 33 chr13 3900309 3900429 -116383883 - L1M3 LINE L1 -299 5884 5765 7 614 549 303 227 39 chr13 3902290 3902399 -116381913 - L1M3 LINE L1 -2424 3716 3597 7 614 264 30 0 0 chr13 3902399 3902432 -116381880 + (GTTTG)n Simple_repeat Simple_repeat 3 35 0 7 614 549 303 227 39 chr13 3902432 3903281 -116381031 - L1M3 LINE L1 -2544 3596 2578 7 614 342 45 0 0 chr13 3903524 3903568 -116380744 + (CATA)n Simple_repeat Simple_repeat 3 46 0 7 614 371 265 52 22 chr13 3903856 3903991 -116380321 - Tigger12A DNA MER2_type -409 382 244 7 614 198 0 0 0 chr13 3904057 3904079 -116380233 + (T)n Simple_repeat Simple_repeat 1 22 0 7 614 1119 63 21 0 chr13 3904081 3904223 -116380089 - B1_Mus1 SINE Alu -2 146 2 7 614 5834 88 14 27 chr13 3904639 3905498 -116378814 + Lx3B LINE L1 6125 6972 -1 7 614 396 0 0 0 chr13 3905682 3905726 -116378586 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 614 456 19 0 0 chr13 3906718 3906771 -116377541 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 614 404 175 368 0 chr13 3906786 3906910 -116377402 - ORR1D1 LTR MaLR -212 172 3 7 614 354 233 194 2 chr13 3907184 3907307 -116377005 + B3A SINE B2 50 195 -3 7 614 1094 199 34 14 chr13 3908103 3908312 -116376000 + B3 SINE B2 4 216 0 7 614 51 0 0 0 chr13 3908312 3908363 -116375949 + AT_rich Low_complexity Low_complexity 1 51 0 7 614 785 161 0 0 chr13 3908620 3908744 -116375568 + B1_Mur4 SINE Alu 1 124 -26 7 614 242 174 0 0 chr13 3908746 3908792 -116375520 + B1_Mus2 SINE Alu 95 140 -7 7 614 225 0 0 0 chr13 3908814 3908839 -116375473 + (T)n Simple_repeat Simple_repeat 1 25 0 7 614 3686 134 45 53 chr13 3909236 3909992 -116374320 - RMER17A LTR ERVK 0 751 2 7 614 282 106 0 0 chr13 3910693 3910740 -116373572 + (T)n Simple_repeat Simple_repeat 1 47 0 7 614 536 211 251 23 chr13 3911260 3911435 -116372877 + B3 SINE B2 2 216 0 7 614 324 219 0 0 chr13 3911476 3911558 -116372754 + (TA)n Simple_repeat Simple_repeat 1 82 0 7 614 1093 90 0 0 chr13 3911605 3911761 -116372551 + B2_Mm2 SINE B2 1 156 -39 7 614 303 71 0 0 chr13 3911762 3911804 -116372508 + (CAAT)n Simple_repeat Simple_repeat 2 43 0 7 614 26 30 0 0 chr13 3912584 3912617 -116371695 + AT_rich Low_complexity Low_complexity 1 33 0 7 614 21 0 0 0 chr13 3912754 3912775 -116371537 + AT_rich Low_complexity Low_complexity 1 21 0 7 614 508 290 90 60 chr13 3912864 3913132 -116371180 - MER89 LTR ERV1 -7 552 277 7 614 607 209 61 92 chr13 3913152 3913315 -116370997 + B3 SINE B2 41 198 0 7 614 238 275 114 46 chr13 3913801 3914002 -116370310 - Lx7 LINE L1 -16 7680 7351 7 614 2189 212 40 103 chr13 3914120 3914772 -116369540 + RMER19C LTR ERVK 1 611 0 7 614 1506 179 101 12 chr13 3914772 3915099 -116369213 + ORR1C2 LTR MaLR 27 384 0 7 614 1037 258 39 35 chr13 3915100 3915410 -116368902 - Lx7 LINE L1 -416 7280 6970 7 614 265 290 29 20 chr13 3915450 3915552 -116368760 + L2a LINE L2 3296 3398 -28 7 614 322 211 50 48 chr13 3916118 3916221 -116368091 + B1_Mur2 SINE Alu 46 149 0 7 614 1306 133 76 14 chr13 3918175 3918450 -116365862 + Lx9 LINE L1 7352 7643 -1 7 614 2035 103 29 0 chr13 3918569 3918879 -116365433 - ORR1A2 LTR MaLR -8 319 1 7 614 1771 186 27 21 chr13 3918882 3919217 -116365095 + MTC LTR MaLR 76 412 -9 7 614 401 182 13 13 chr13 3919243 3919321 -116364991 + MTC LTR MaLR 335 412 -9 7 614 1227 256 76 15 chr13 3919939 3920280 -116364032 - ORR1D2 LTR MaLR -8 362 1 7 614 1743 149 24 7 chr13 3920516 3920813 -116363499 + MTC LTR MaLR 97 398 -23 7 614 234 0 0 0 chr13 3921044 3921070 -116363242 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 614 374 297 10 0 chr13 3921127 3921228 -116363084 + PB1D10 SINE Alu 16 117 0 7 614 677 286 25 40 chr13 3921231 3921431 -116362881 + B3A SINE B2 2 198 0 7 614 391 322 34 73 chr13 3921679 3921913 -116362399 - MLT2C1 LTR ERVL -30 367 143 7 614 358 261 0 33 chr13 3922136 3922227 -116362085 - RLTR20A1 LTR ERVK 0 551 464 7 614 279 0 0 0 chr13 3922230 3922261 -116362051 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 614 874 196 66 25 chr13 3922289 3922530 -116361782 - RLTR20A1 LTR ERVK -300 251 1 7 614 280 255 20 30 chr13 3922530 3922629 -116361683 + PB1D9 SINE Alu 18 115 -5 7 614 410 202 42 11 chr13 3922815 3922910 -116361402 + B3A SINE B2 1 98 -100 7 614 569 303 74 104 chr13 3922999 3923089 -116361223 + B4 SINE B4 2 111 -181 8 614 1375 205 191 6 chr13 3923089 3923413 -116360899 + ORR1C2 LTR MaLR 1 384 0 8 614 569 303 74 104 chr13 3923413 3923452 -116360860 + B4 SINE B4 112 152 -140 8 614 297 0 0 0 chr13 3923452 3923485 -116360827 + (CA)n Simple_repeat Simple_repeat 1 33 0 8 614 569 303 74 104 chr13 3923485 3923652 -116360660 + B4 SINE B4 153 289 -3 8 614 669 269 56 0 chr13 3924382 3924579 -116359733 + L1MD1 LINE L1 6035 6242 0 8 614 798 41 0 0 chr13 3925658 3925756 -116358556 + (TG)n Simple_repeat Simple_repeat 1 98 0 8 614 433 321 45 36 chr13 3925764 3925984 -116358328 - B4A SINE B4 -14 278 57 8 614 26 82 0 0 chr13 3926007 3926068 -116358244 + AT_rich Low_complexity Low_complexity 1 61 0 8 614 380 258 16 55 chr13 3926142 3926269 -116358043 - RSINE1 SINE B4 -40 125 4 8 614 253 258 30 40 chr13 3926703 3926804 -116357508 - RSINE1 SINE B4 -61 104 5 8 614 747 137 15 0 chr13 3927079 3927210 -116357102 + URR1B DNA MER1_type 92 224 -1 8 614 186 71 0 0 chr13 3927623 3927651 -116356661 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8 614 228 35 0 0 chr13 3927996 3928025 -116356287 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 8 614 1222 61 0 0 chr13 3928027 3928174 -116356138 - B1_Mm SINE Alu 0 147 1 8 614 288 211 42 0 chr13 3928210 3928281 -116356031 + CT-rich Low_complexity Low_complexity 2 75 0 8 614 378 315 30 52 chr13 3928286 3928420 -116355892 - RSINE1 SINE B4 0 165 35 8 614 777 353 126 23 chr13 3928587 3929103 -116355209 - MLT1G1 LTR MaLR -7 572 4 8 614 368 307 15 38 chr13 3929347 3929479 -116354833 + ID_B1 SINE B4 20 148 -76 8 614 307 43 27 55 chr13 3929529 3929602 -116354710 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 8 614 369 93 0 0 chr13 3930612 3930666 -116353646 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 614 1469 80 0 5 chr13 3930711 3930900 -116353412 + B2_Mm2 SINE B2 1 188 -7 8 614 593 333 9 56 chr13 3931237 3931453 -116352859 - B4 SINE B4 0 292 87 8 614 618 198 19 0 chr13 3931464 3931621 -116352691 + CT-rich Low_complexity Low_complexity 2 161 0 8 614 400 219 0 0 chr13 3931626 3931699 -116352613 - B4 SINE B4 -219 73 1 8 615 444 67 0 0 chr13 3933446 3933506 -116350806 + (TG)n Simple_repeat Simple_repeat 2 61 0 8 615 401 311 157 29 chr13 3933536 3933778 -116350534 - B4A SINE B4 -19 273 1 8 615 493 61 195 0 chr13 3933869 3933951 -116350361 - B2_Mm2 SINE B2 -95 100 3 8 615 24 0 0 0 chr13 3934439 3934463 -116349849 + AT_rich Low_complexity Low_complexity 1 24 0 8 615 321 315 85 21 chr13 3934639 3934827 -116349485 - B4A SINE B4 -4 288 89 8 615 398 278 9 36 chr13 3935412 3935524 -116348788 + RSINE1 SINE B4 2 110 -55 8 615 324 330 43 0 chr13 3935933 3936048 -116348264 - Tigger12c DNA MER2_type -542 192 73 8 615 28 29 0 0 chr13 3937005 3937040 -116347272 + AT_rich Low_complexity Low_complexity 1 35 0 8 615 2950 6 0 0 chr13 3937407 3937732 -116346580 - L1Md_A LINE L1 -1 6581 6257 8 615 246 193 0 0 chr13 3937834 3937891 -116346421 + CT-rich Low_complexity Low_complexity 1 57 0 8 615 223 233 36 18 chr13 3937903 3937965 -116346347 - ID4 SINE ID -20 63 1 8 615 474 18 0 0 chr13 3938089 3938144 -116346168 + (TG)n Simple_repeat Simple_repeat 1 55 0 8 615 654 317 9 114 chr13 3938557 3938598 -116345714 + B4A SINE B4 1 39 -253 8 615 1661 187 42 63 chr13 3938598 3938980 -116345332 + ORR1D1 LTR MaLR 1 374 0 8 615 654 317 9 114 chr13 3938980 3939262 -116345050 + B4A SINE B4 40 290 -2 8 615 1910 20 4 12 chr13 3939273 3939520 -116344792 + MTA_Mm LTR MaLR 1 245 -151 8 615 202 296 0 14 chr13 3939564 3939636 -116344676 + (CATA)n Simple_repeat Simple_repeat 4 74 0 8 615 946 181 26 31 chr13 3941065 3941293 -116343019 - Lx LINE L1 -7 6647 6421 8 615 399 269 57 43 chr13 3941294 3941434 -116342878 + MER5A DNA MER1_type 27 168 -21 8 615 428 283 188 50 chr13 3941421 3941719 -116342593 + ORR1E LTR MaLR 9 347 -12 8 615 456 232 7 42 chr13 3941885 3942029 -116342283 + Lx6 LINE L1 7311 7449 -11 8 615 478 230 39 54 chr13 3942267 3942396 -116341916 - B1F SINE Alu -22 127 1 8 615 180 179 0 0 chr13 3942513 3942552 -116341760 + (CATA)n Simple_repeat Simple_repeat 4 42 0 8 615 486 0 0 0 chr13 3943789 3943843 -116340469 + (GA)n Simple_repeat Simple_repeat 1 54 0 8 615 219 222 0 36 chr13 3944818 3944874 -116339438 - L2a LINE L2 -12 3414 3361 8 615 206 299 0 38 chr13 3944874 3944898 -116339414 - MIRm SINE MIR -10 266 190 8 615 495 102 0 0 chr13 3944935 3945023 -116339289 + (GA)n Simple_repeat Simple_repeat 1 88 0 8 615 261 0 0 0 chr13 3945887 3945916 -116338396 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 615 1323 85 21 11 chr13 3946234 3946425 -116337887 - B2_Mm2 SINE B2 -1 194 2 8 615 623 232 33 57 chr13 3946438 3946648 -116337664 - RMER1A Other Other 0 1030 826 8 615 617 192 7 71 chr13 3946731 3946871 -116337441 - RMER1B Other Other -150 916 786 8 615 442 250 0 0 chr13 3946904 3946992 -116337320 - RMER1A Other Other -941 89 2 8 615 362 242 77 0 chr13 3947790 3947881 -116336431 + MER34A1 LTR ERV1 25 122 -465 8 615 338 254 0 0 chr13 3948211 3948282 -116336030 - ID SINE ID -151 73 3 8 615 538 226 0 0 chr13 3948359 3948465 -116335847 + B1F SINE Alu 37 142 -7 8 615 807 203 38 11 chr13 3948812 3948996 -116335316 + B2_Mm2 SINE B2 7 195 0 8 615 451 312 111 21 chr13 3949032 3949104 -116335208 + B4 SINE B4 14 84 -208 8 615 198 0 0 0 chr13 3949104 3949126 -116335186 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 8 615 451 312 111 21 chr13 3949126 3949243 -116335069 + B4 SINE B4 85 220 -72 8 615 1269 39 0 0 chr13 3949262 3949417 -116334895 + (GGA)n Simple_repeat Simple_repeat 3 157 0 8 615 222 316 13 13 chr13 3949737 3949814 -116334498 - B4 SINE B4 -215 77 1 8 615 1171 55 14 0 chr13 3950015 3950160 -116334152 - B1_Mus1 SINE Alu 0 148 2 8 615 401 275 62 77 chr13 3950400 3950530 -116333782 + PB1D7 SINE Alu 1 128 -21 8 615 860 212 15 73 chr13 3950830 3951034 -116333278 + B3A SINE B2 4 195 -3 8 615 666 98 9 18 chr13 3951446 3951560 -116332752 + L1_Mus2 LINE L1 6453 6565 -1 8 615 22 35 0 0 chr13 3951564 3951593 -116332719 + AT_rich Low_complexity Low_complexity 1 29 0 8 615 437 347 46 7 chr13 3951716 3951867 -116332445 + RSINE1 SINE B4 9 165 0 8 615 353 284 45 9 chr13 3952000 3952110 -116332202 - B1F SINE Alu -9 140 27 8 615 292 319 9 0 chr13 3952540 3952653 -116331659 + (TG)n Simple_repeat Simple_repeat 1 114 0 8 615 262 281 49 0 chr13 3952920 3953002 -116331310 - MIRm SINE MIR -103 173 88 8 615 976 307 7 3 chr13 3953438 3953726 -116330586 - B4A SINE B4 -3 289 1 8 615 1010 212 19 5 chr13 3953748 3953956 -116330356 - B3 SINE B2 -5 211 1 8 615 1297 75 35 6 chr13 3954183 3954356 -116329956 + B2_Mm1t SINE B2 2 179 -14 8 615 338 109 13 34 chr13 3954402 3954469 -116329843 + B2_Mm2 SINE B2 46 116 -82 8 615 30 69 0 0 chr13 3954623 3954681 -116329631 + AT_rich Low_complexity Low_complexity 1 58 0 8 615 195 231 227 15 chr13 3955235 3955301 -116329011 - MER5A DNA MER1_type -83 106 27 8 615 307 281 0 11 chr13 3955763 3955853 -116328459 + (CA)n Simple_repeat Simple_repeat 2 90 0 8 615 647 303 96 9 chr13 3955885 3956115 -116328197 + B4A SINE B4 1 250 -42 8 615 225 0 0 0 chr13 3956258 3956283 -116328029 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 615 1179 63 0 0 chr13 3956364 3956507 -116327805 + B1_Mus2 SINE Alu 5 147 0 8 615 210 111 44 0 chr13 3956507 3956552 -116327760 + A-rich Low_complexity Low_complexity 3 49 0 8 615 210 171 0 0 chr13 3956640 3956681 -116327631 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 615 197 132 26 0 chr13 3957664 3957702 -116326610 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 615 5441 179 35 9 chr13 3957705 3958690 -116325622 - MERVL_2A-int LTR ERVL -4444 1317 307 8 615 2209 137 61 14 chr13 3958705 3959068 -116325244 - RLTR14 LTR ERV1 0 382 3 8 615 3813 154 140 9 chr13 3959088 3959868 -116324444 - RLTR14-int LTR ERV1 0 5317 4435 8 615 315 0 0 0 chr13 3959868 3959903 -116324409 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 615 4392 169 98 40 chr13 3959903 3960736 -116323576 - RLTR14-int LTR ERV1 -883 4434 3553 8 615 3547 176 71 8 chr13 3960736 3961277 -116323035 + RMER1B Other Other 377 918 -148 8 615 423 0 0 0 chr13 3961277 3961324 -116322988 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 8 615 3547 176 71 8 chr13 3961324 3961417 -116322895 + RMER1B Other Other 919 1050 -16 8 615 4044 153 17 53 chr13 3961426 3962174 -116322138 - RLTR14-int LTR ERV1 -1763 3554 2834 8 615 761 210 75 27 chr13 3962229 3962415 -116321897 - B3A SINE B2 0 198 4 8 615 236 296 37 12 chr13 3963169 3963251 -116321061 + LTR85a LTR Gypsy? 7 90 -612 8 615 21 0 0 0 chr13 3963318 3963339 -116320973 + AT_rich Low_complexity Low_complexity 1 21 0 8 615 426 229 0 0 chr13 3963559 3963738 -116320574 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 615 391 203 0 7 chr13 3963738 3963893 -116320419 + (TCTCTG)n Simple_repeat Simple_repeat 1 153 0 8 615 565 148 13 10 chr13 3963964 3964287 -116320025 + (TCTCTG)n Simple_repeat Simple_repeat 1 324 0 8 615 233 311 64 36 chr13 3964648 3964758 -116319554 + L1MEd LINE L1 373 485 -5634 8 615 5367 226 84 7 chr13 3965241 3966472 -116317840 + Lx9 LINE L1 6306 7633 -11 8 615 285 29 0 0 chr13 3966472 3966506 -116317806 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 8 615 2622 224 15 6 chr13 3967427 3967958 -116316354 + Lx6 LINE L1 6378 6913 -547 8 615 968 266 37 4 chr13 3967961 3968206 -116316106 - Lx8 LINE L1 -1030 6443 6191 8 615 1038 137 168 5 chr13 3968400 3968591 -116315721 - URR1B DNA MER1_type -3 222 1 8 615 432 0 0 0 chr13 3968991 3969039 -116315273 + (CA)n Simple_repeat Simple_repeat 2 49 0 9 615 189 107 0 0 chr13 3969155 3969183 -116315129 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 9 615 779 57 9 0 chr13 3969740 3969845 -116314467 + (GA)n Simple_repeat Simple_repeat 1 106 0 9 615 778 283 81 82 chr13 3969914 3970423 -116313889 - RMER5 LTR ERV1 0 534 27 9 615 2089 123 9 58 chr13 3970498 3970844 -116313468 + ORR1A4 LTR MaLR 1 329 0 9 615 239 190 224 0 chr13 3971547 3971605 -116312707 + ID2 SINE ID 9 79 -4 9 615 612 0 0 0 chr13 3971935 3972003 -116312309 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 9 615 1857 81 39 0 chr13 3972092 3972352 -116311960 - L1_Mus3 LINE L1 -6 6632 6363 9 615 36966 65 2 17 chr13 3972383 3978524 -116305788 - L1Md_F2 LINE L1 -27 6555 511 9 615 2749 123 12 0 chr13 3978524 3978947 -116305365 + L1_Mm LINE L1 4922 5349 -534 9 615 943 235 84 7 chr13 3978947 3979221 -116305091 - RMER5 LTR ERV1 -16 518 224 9 615 693 211 96 9 chr13 3979271 3979308 -116305004 - L1MC1 LINE L1 -386 5947 5903 9 615 474 49 0 0 chr13 3979308 3979369 -116304943 + (TCTA)n Simple_repeat Simple_repeat 1 61 0 9 615 693 211 96 9 chr13 3979369 3979560 -116304752 - L1MC1 LINE L1 -431 5902 5699 9 615 600 306 0 63 chr13 3979590 3979796 -116304516 - B3A SINE B2 0 198 6 9 615 553 247 138 16 chr13 3979813 3980002 -116304310 - L1MC1 LINE L1 -651 5682 5471 9 615 296 239 67 127 chr13 3980018 3980035 -116304277 + YREP_Mm Unknown Unknown 168 293 -1519 9 615 409 299 17 0 chr13 3980035 3980152 -116304160 - ID_B1 SINE B4 -1 223 105 9 615 3974 97 0 0 chr13 3980434 3980952 -116303360 + L1_Mus3 LINE L1 6013 6530 -108 9 615 313 240 10 50 chr13 3980952 3981053 -116303259 + ID_B1 SINE B4 128 224 0 9 615 8403 31 5 0 chr13 3982438 3983404 -116300908 - L1Md_F2 LINE L1 -14 6568 5598 9 615 498 17 0 0 chr13 3983744 3983803 -116300509 + (TG)n Simple_repeat Simple_repeat 1 59 0 9 615 2560 110 167 0 chr13 3983863 3984319 -116299993 - RLTR47_MM LTR ERV1 0 532 1 9 615 397 297 79 137 chr13 3984373 3984650 -116299662 - MTEa LTR MaLR -37 342 82 9 615 1157 188 53 33 chr13 3984674 3984977 -116299335 - RMER10A LTR ERVL -7 435 127 9 615 1011 189 152 51 chr13 3984976 3985233 -116299079 - RLTR14 LTR ERV1 -99 283 1 9 615 340 314 0 9 chr13 3985392 3985498 -116298814 - RLTR14-int LTR ERV1 -151 5166 5062 9 615 350 271 62 8 chr13 3985819 3985949 -116298363 - RLTR14-int LTR ERV1 -1897 3420 3284 9 615 750 281 52 24 chr13 3986189 3986363 -116297949 - MURVY-int LTR ERV1 -3130 4476 4196 9 615 449 17 17 0 chr13 3986363 3986421 -116297891 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 9 615 750 277 47 19 chr13 3986421 3986587 -116297725 - MURVY-int LTR ERV1 -3309 4297 4036 9 615 383 238 0 0 chr13 3986700 3986784 -116297528 - MTEa LTR MaLR -295 84 1 9 615 690 314 73 23 chr13 3987167 3987509 -116296803 - ORR1E LTR MaLR 0 359 1 9 615 7324 67 1 0 chr13 3987537 3988480 -116295832 - L1_Mm LINE L1 -1800 4083 3140 9 615 404 225 0 33 chr13 3988751 3988843 -116295469 + MTEb LTR MaLR 1 89 -290 9 615 5950 47 5 4 chr13 3988843 3989571 -116294741 + L1_Mm LINE L1 4856 5586 -297 9 615 8219 41 10 2 chr13 3989571 3990559 -116293753 + L1Md_F2 LINE L1 5587 6582 0 9 615 2465 202 37 2 chr13 3990674 3991164 -116293148 + RLTR18B LTR ERVK 1 507 -5 9 615 273 277 54 0 chr13 3992037 3992149 -116292163 - L1M5 LINE L1 -694 5430 5313 9 615 241 317 59 10 chr13 3992456 3992558 -116291754 - B3A SINE B2 -33 165 59 9 615 884 144 41 82 chr13 3992666 3992862 -116291450 + Lx4A LINE L1 6869 7056 -2 9 615 246 333 84 19 chr13 3993564 3993671 -116290641 - PB1D10 SINE Alu -1 116 3 9 615 1248 256 82 3 chr13 3993972 3994301 -116290011 + MTEa LTR MaLR 1 355 -24 9 615 879 164 91 20 chr13 3994383 3994582 -116289730 - B3 SINE B2 -3 213 1 9 615 7293 188 29 38 chr13 3995851 3996086 -116288226 + Lx7 LINE L1 6136 6366 -1330 9 615 2849 71 40 3 chr13 3996086 3996489 -116287823 + L1_Mus1 LINE L1 6168 6567 0 9 615 7293 188 29 38 chr13 3996489 3997650 -116286662 + Lx7 LINE L1 6367 7519 -177 9 615 684 93 0 0 chr13 3997666 3997763 -116286549 + (TCC)n Simple_repeat Simple_repeat 2 98 0 9 615 558 269 69 8 chr13 3997763 3997894 -116286418 - B1_Mur4 SINE Alu -10 140 2 9 615 198 0 0 0 chr13 3997898 3997920 -116286392 + (TTA)n Simple_repeat Simple_repeat 3 24 0 9 615 455 215 28 62 chr13 3997920 3997955 -116286357 + Lx7 LINE L1 7558 7593 -103 9 615 486 46 0 0 chr13 3997955 3998020 -116286292 + (GA)n Simple_repeat Simple_repeat 2 66 0 9 615 455 215 28 62 chr13 3998020 3998128 -116286184 + Lx7 LINE L1 7594 7696 0 9 615 346 220 20 0 chr13 3999067 3999167 -116285145 + CT-rich Low_complexity Low_complexity 2 103 0 9 615 337 249 84 81 chr13 3999186 3999307 -116285005 - B1_Mur1 SINE Alu -4 116 1 9 615 4341 74 0 7 chr13 3999424 4000000 -116284312 + L1_Mus1 LINE L1 5766 6333 -234 9 615 1789 60 0 0 chr13 4000000 4000234 -116284078 + L1_Mus1 LINE L1 6334 6567 0 1 615 222 264 97 37 chr13 4001031 4001165 -116283147 - MIR SINE MIR -119 143 2 2 615 396 0 0 0 chr13 4001343 4001387 -116282925 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 615 5243 219 96 67 chr13 4001667 4002172 -116282140 - Lx6 LINE L1 -168 7528 6741 4 615 333 0 0 0 chr13 4002172 4002209 -116282103 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 5 615 17029 202 82 35 chr13 4002209 4005476 -116278836 - Lx6 LINE L1 -720 6740 3434 4 615 2919 35 3 6 chr13 4005476 4005823 -116278489 - ORR1A0 LTR MaLR 0 346 1 6 615 14217 50 7 1 chr13 4005823 4007603 -116276709 - ORR1A0-int LTR MaLR 0 1792 1 6 615 2976 20 9 0 chr13 4007603 4007946 -116276366 - ORR1A0 LTR MaLR 0 346 1 6 615 17029 199 88 22 chr13 4007946 4010176 -116274136 - Lx6 LINE L1 -2444 3433 912 4 615 567 256 123 4 chr13 4010227 4010455 -116273857 - Lx6 LINE L1 -7410 318 64 4 615 274 288 0 51 chr13 4010481 4010598 -116273714 - Lx8 LINE L1 -4 7469 7359 7 615 407 258 11 0 chr13 4010600 4010693 -116273619 - RSINE1 SINE B4 -69 96 3 8 615 778 246 96 15 chr13 4010833 4011031 -116273281 + ID_B1 SINE B4 2 215 -9 9 615 185 311 91 76 chr13 4011281 4011413 -116272899 + MIRm SINE MIR 18 151 -125 1 615 6450 68 0 1 chr13 4011465 4012289 -116272023 - L1_Mus2 LINE L1 0 6566 5744 1 615 6135 89 17 0 chr13 4012289 4013172 -116271140 + L1_Mus2 LINE L1 4852 5749 -134 1 615 357 102 0 0 chr13 4013404 4013463 -116270849 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 615 10726 91 12 11 chr13 4014064 4016572 -116267740 + L1VL1 LINE L1 410 2921 -2962 1 615 1019 135 0 0 chr13 4016573 4016743 -116267569 + L1Md_F2 LINE L1 262 431 -6185 1 615 31589 67 1 1 chr13 4016739 4021411 -116262901 + L1Md_F2 LINE L1 911 5586 -297 1 615 8297 40 0 5 chr13 4021412 4022412 -116261900 + L1Md_F2 LINE L1 5588 6582 0 1 615 16657 111 12 8 chr13 4022412 4025070 -116259242 + L1VL1 LINE L1 2912 5580 -303 1 615 2854 84 5 15 chr13 4025073 4025471 -116258841 - MTA_Mm LTR MaLR 0 396 3 1 615 6391 100 60 59 chr13 4025473 4026570 -116257742 - MTA_Mm-int LTR MaLR 0 1098 1 1 615 1288 78 13 18 chr13 4026570 4026760 -116257552 - MTA_Mm LTR MaLR 0 396 192 1 615 865 231 36 0 chr13 4026990 4027185 -116257127 + B3 SINE B2 1 202 -14 1 615 347 289 97 32 chr13 4028277 4028431 -116255881 + MLT1D LTR MaLR 19 182 -323 1 615 751 356 49 9 chr13 4029087 4029433 -116254879 - MLT1A1 LTR MaLR 0 408 49 1 615 283 23 45 0 chr13 4029600 4029644 -116254668 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 615 325 343 67 19 chr13 4029644 4029748 -116254564 - ID_B1 SINE B4 -84 140 32 2 615 234 0 0 0 chr13 4029848 4029874 -116254438 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 615 2698 215 140 18 chr13 4030728 4030902 -116253410 + RLTR40 LTR ERVK 1 173 -644 2 615 2715 75 61 25 chr13 4030902 4031296 -116253016 + L1_Mus2 LINE L1 6158 6565 -1 2 615 2698 215 140 18 chr13 4031296 4031849 -116252463 + RLTR40 LTR ERVK 174 817 0 2 615 1138 75 0 0 chr13 4032382 4032529 -116251783 - B1_Mus1 SINE Alu 0 148 2 2 615 194 0 39 0 chr13 4032541 4032567 -116251745 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 615 1204 42 7 0 chr13 4032567 4032711 -116251601 - B1_Mm SINE Alu -1 146 2 2 615 1223 89 6 0 chr13 4035517 4035696 -116248616 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 615 239 190 17 0 chr13 4035701 4035759 -116248553 + CT-rich Low_complexity Low_complexity 3 61 0 2 615 21 0 0 0 chr13 4036103 4036124 -116248188 + AT_rich Low_complexity Low_complexity 1 21 0 2 615 960 9 0 0 chr13 4036283 4036392 -116247920 + (GAA)n Simple_repeat Simple_repeat 3 111 0 3 615 396 311 74 16 chr13 4036392 4036513 -116247799 - ID_B1 SINE B4 -17 207 80 3 615 197 327 0 0 chr13 4036617 4036669 -116247643 + L2a LINE L2 3360 3411 -15 3 615 471 283 72 52 chr13 4037454 4037607 -116246705 + RSINE1 SINE B4 1 156 -9 3 615 315 0 0 0 chr13 4037632 4037667 -116246645 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 615 244 186 87 14 chr13 4038259 4038345 -116245967 + Lx8 LINE L1 7383 7448 -25 3 615 311 0 0 25 chr13 4038618 4038658 -116245654 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 615 467 256 115 0 chr13 4039602 4039758 -116244554 + Lx6 LINE L1 7260 7433 -27 3 615 995 86 7 0 chr13 4040694 4040834 -116243478 - L1_Mus1 LINE L1 -2 6565 6425 3 615 1405 204 110 0 chr13 4041079 4041388 -116242924 - Lx6 LINE L1 -766 6694 6352 3 615 220 143 23 35 chr13 4041391 4041478 -116242834 + (TA)n Simple_repeat Simple_repeat 1 86 0 4 615 354 228 6 60 chr13 4041487 4041669 -116242643 + (TTATA)n Simple_repeat Simple_repeat 5 176 0 4 615 597 147 0 92 chr13 4041689 4041809 -116242503 - L1_Mur2 LINE L1 -469 5408 5301 4 615 3417 28 5 0 chr13 4041809 4042203 -116242109 - MTA_Mm LTR MaLR 0 396 1 4 615 597 147 0 92 chr13 4042203 4042224 -116242088 - L1_Mur2 LINE L1 -577 5300 5280 4 615 408 40 0 0 chr13 4042228 4042278 -116242034 + (TATG)n Simple_repeat Simple_repeat 2 51 0 4 615 1000 118 13 7 chr13 4042278 4042432 -116241880 - B2_Mm2 SINE B2 -39 156 2 4 615 828 154 26 37 chr13 4042436 4042625 -116241687 - L1_Mur2 LINE L1 -572 5305 5119 4 615 223 146 20 20 chr13 4042628 4042677 -116241635 + (TATAA)n Simple_repeat Simple_repeat 5 53 0 4 615 197 73 89 18 chr13 4042735 4042791 -116241521 + (TTATA)n Simple_repeat Simple_repeat 3 62 0 4 615 295 207 45 32 chr13 4042817 4042972 -116241340 + (TTATA)n Simple_repeat Simple_repeat 5 161 0 4 615 211 214 50 17 chr13 4042941 4043060 -116241252 + (TA)n Simple_repeat Simple_repeat 2 124 0 4 615 340 185 31 0 chr13 4043060 4043125 -116241187 - Lx6 LINE L1 -1299 6161 6095 3 615 1117 273 32 3 chr13 4043123 4043406 -116240906 + Lx6 LINE L1 6993 7283 -177 4 615 242 267 79 13 chr13 4043958 4044034 -116240278 + ID4_ SINE ID 1 81 -2 5 615 2424 138 28 8 chr13 4044507 4045275 -116239037 + L1_Mur2 LINE L1 896 1680 -4197 5 615 537 296 25 44 chr13 4045745 4045904 -116238408 - B3A SINE B2 -41 157 2 5 615 180 0 0 0 chr13 4045997 4046017 -116238295 + (T)n Simple_repeat Simple_repeat 1 20 0 5 615 233 388 0 0 chr13 4046982 4047049 -116237263 - ID4 SINE ID -16 67 1 5 615 243 305 103 21 chr13 4047058 4047155 -116237157 - PB1D10 SINE Alu -5 112 8 5 615 252 0 0 0 chr13 4047174 4047202 -116237110 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 5 615 180 0 0 0 chr13 4047202 4047222 -116237090 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 615 1220 221 158 33 chr13 4048799 4049160 -116235152 + MTD LTR MaLR 14 419 0 5 615 198 103 0 0 chr13 4049285 4049314 -116234998 + (TAG)n Simple_repeat Simple_repeat 1 29 0 5 615 402 306 0 44 chr13 4049465 4049578 -116234734 - PB1D10 SINE Alu -9 108 1 6 615 981 319 188 20 chr13 4049659 4050112 -116234200 + MER44C DNA MER2_type 24 552 -181 6 615 2387 103 0 0 chr13 4051583 4051902 -116232410 - ORR1A2 LTR MaLR -8 319 1 6 615 1280 278 41 8 chr13 4052118 4052484 -116231828 - MTE2b LTR MaLR 0 379 2 6 615 333 0 0 0 chr13 4052531 4052568 -116231744 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 615 2836 140 41 19 chr13 4053372 4053888 -116230424 + RLTR11A LTR ERVK 1 527 -1 6 615 216 0 0 0 chr13 4053888 4053912 -116230400 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 6 615 297 284 63 63 chr13 4055050 4055130 -116229182 - RLTR42-int LTR ERVK -4150 1372 1289 6 615 183 80 0 0 chr13 4055130 4055155 -116229157 + (TGG)n Simple_repeat Simple_repeat 2 26 0 6 615 297 284 63 63 chr13 4055155 4055311 -116229001 - RLTR42-int LTR ERVK -4234 1288 1136 6 615 693 294 14 19 chr13 4055419 4055634 -116228678 + ID_B1 SINE B4 4 217 -7 6 615 431 271 64 59 chr13 4055704 4055924 -116228388 + ORSL DNA Tip100 2 222 -53 7 615 607 263 59 15 chr13 4056111 4056246 -116228066 + RSINE1 SINE B4 4 144 -21 7 615 312 70 0 0 chr13 4056255 4056298 -116228014 + (CAA)n Simple_repeat Simple_repeat 2 44 0 7 615 1273 64 14 114 chr13 4056300 4056511 -116227801 - B2_Mm2 SINE B2 -4 191 2 7 615 561 266 48 28 chr13 4056522 4056773 -116227539 + L1M1 LINE L1 5417 5672 -628 7 615 2126 113 0 19 chr13 4056788 4057151 -116227161 - ORR1A2 LTR MaLR 0 346 12 7 615 366 205 0 12 chr13 4057188 4057272 -116227040 + L1M1 LINE L1 5706 5788 -503 7 615 1527 153 25 21 chr13 4057286 4057567 -116226745 + RLTR17 LTR ERVK 1 282 -410 7 615 988 132 29 29 chr13 4057569 4057741 -116226571 - B2_Mm1t SINE B2 -8 185 14 7 615 216 0 0 0 chr13 4057756 4057780 -116226532 + (T)n Simple_repeat Simple_repeat 1 24 0 7 615 578 54 0 0 chr13 4057780 4057854 -116226458 - B1_Mus2 SINE Alu 0 147 74 7 615 2123 135 57 11 chr13 4057856 4058223 -116226089 + RLTR17 LTR ERVK 309 692 0 7 615 924 206 72 0 chr13 4059846 4060026 -116224286 + B3 SINE B2 16 208 -8 8 615 261 0 0 0 chr13 4060213 4060242 -116224070 + (TC)n Simple_repeat Simple_repeat 1 29 0 8 615 478 255 27 60 chr13 4060769 4060919 -116223393 - B3A SINE B2 0 198 54 8 615 1039 280 53 4 chr13 4061755 4062017 -116222295 - B4 SINE B4 -16 276 2 8 616 2486 167 27 25 chr13 4063647 4064133 -116220179 - RMER5 LTR ERV1 -15 519 33 8 616 6361 7 3 0 chr13 4064767 4065475 -116218837 - L1Md_T LINE L1 0 6582 5873 8 616 3081 6 46 0 chr13 4065475 4065826 -116218486 - IAPLTR1_Mm LTR ERVK 0 367 1 8 616 7326 30 2 6 chr13 4065826 4066728 -116217584 - IAPEz-int LTR ERVK 0 6481 5583 8 616 7765 13 0 0 chr13 4066728 4067637 -116216675 - IAPEz-int LTR ERVK -2048 4433 3525 8 616 869 81 24 0 chr13 4067637 4067760 -116216552 - IAPEz-int LTR ERVK -2770 4910 4785 8 616 1669 123 4 15 chr13 4067757 4068022 -116216290 - IAPEz-int LTR ERVK -5183 2497 2236 8 616 424 38 0 0 chr13 4068021 4068074 -116216238 - IAPEz-int LTR ERVK -5070 1411 1359 8 616 3256 78 13 14 chr13 4068074 4068803 -116215509 - IAPEz-int LTR ERVK -5819 662 8 8 616 3054 14 43 0 chr13 4068803 4069155 -116215157 - IAPLTR1_Mm LTR ERVK 0 367 1 8 616 36244 35 1 0 chr13 4069155 4075287 -116209025 - L1Md_Gf LINE L1 -5 5881 1 8 616 183 129 0 0 chr13 4075496 4075527 -116208785 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 616 746 333 36 83 chr13 4075569 4075870 -116208442 - B4 SINE B4 -2 290 4 9 616 477 330 44 88 chr13 4076014 4076381 -116207931 + MTD LTR MaLR 9 419 0 9 616 474 18 0 0 chr13 4077336 4077391 -116206921 + (GA)n Simple_repeat Simple_repeat 1 55 0 9 616 38 22 0 0 chr13 4077567 4077612 -116206700 + AT_rich Low_complexity Low_complexity 1 45 0 9 616 3634 97 24 0 chr13 4077625 4078129 -116206183 - Lx3A LINE L1 0 6981 6466 9 616 289 24 49 0 chr13 4078183 4078224 -116206088 - Lx3A LINE L1 -149 6832 6790 9 616 378 114 0 0 chr13 4079062 4079132 -116205180 + (CA)n Simple_repeat Simple_repeat 2 71 0 9 616 458 282 116 33 chr13 4079134 4079255 -116205057 - RSINE1 SINE B4 -27 138 8 9 616 1993 173 59 81 chr13 4080443 4080533 -116203779 - MTC LTR MaLR -8 413 352 9 616 1157 82 0 0 chr13 4080533 4080679 -116203633 - B1_Mus2 SINE Alu 0 147 2 9 616 1993 173 59 81 chr13 4080679 4081010 -116203302 - MTC LTR MaLR -70 351 1 9 616 3164 77 10 0 chr13 4081033 4081450 -116202862 - BGLII LTR ERVK 0 421 1 1 616 2572 199 124 14 chr13 4081506 4082363 -116201949 - MYSERV16_I-int LTR ERVK -79 2247 1297 1 616 2483 169 81 69 chr13 4082355 4083047 -116201265 - RMER3D-int LTR ERVK -1148 1694 470 1 616 248 69 32 65 chr13 4083070 4083132 -116201180 + CT-rich Low_complexity Low_complexity 1 60 0 1 616 576 94 0 0 chr13 4083132 4083245 -116201067 - RMER3D-int LTR ERVK -2278 564 489 1 616 2854 70 11 81 chr13 4083282 4083717 -116200595 - L1_Mus2 LINE L1 0 6566 6162 1 616 706 186 5 43 chr13 4083782 4083990 -116200322 - RMER3D-int LTR ERVK -1991 851 652 1 616 704 203 0 44 chr13 4084022 4084228 -116200084 - RMER3D-int LTR ERVK -1994 848 652 1 616 309 83 21 0 chr13 4084238 4084286 -116200026 - RMER3D-int LTR ERVK -6346 1060 1012 1 616 569 217 124 50 chr13 4084254 4084472 -116199840 - RMER3D-int LTR ERVK -2278 564 331 1 616 2999 89 12 0 chr13 4084785 4085201 -116199111 - BGLII LTR ERVK 0 421 1 1 616 436 187 16 0 chr13 4085551 4085674 -116198638 + CT-rich Low_complexity Low_complexity 2 126 0 1 616 225 250 143 13 chr13 4085681 4085758 -116198554 - B4 SINE B4 -5 287 201 1 616 500 198 28 9 chr13 4085789 4085896 -116198416 - MTD LTR MaLR 0 419 311 1 616 884 153 79 6 chr13 4087015 4087193 -116197119 - B2_Mm2 SINE B2 -2 193 3 1 616 625 254 14 27 chr13 4087850 4087996 -116196316 + ID_B1 SINE B4 81 224 0 1 616 354 190 11 7 chr13 4088026 4088117 -116196195 - MTC LTR MaLR 0 421 304 1 616 841 281 64 0 chr13 4088468 4088671 -116195641 - B3 SINE B2 0 216 1 1 616 505 308 0 30 chr13 4089669 4089803 -116194509 - B1_Mur1 SINE Alu -7 142 13 1 616 333 326 62 56 chr13 4089971 4090312 -116194000 + L1M5 LINE L1 4421 4763 -1383 1 616 841 250 78 10 chr13 4090322 4090528 -116193784 + B4 SINE B4 4 223 -69 1 616 28695 155 30 58 chr13 4090598 4092461 -116191851 + L1_Mus2 LINE L1 219 2012 -3871 1 616 3896 48 6 10 chr13 4092461 4092948 -116191364 + L1Md_F2 LINE L1 6096 6580 -2 1 616 28695 105 13 3 chr13 4092948 4097469 -116186843 + L1_Mus2 LINE L1 2013 6566 0 1 616 288 0 0 0 chr13 4097787 4097819 -116186493 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1 616 474 268 27 53 chr13 4097819 4097969 -116186343 + RLTR14 LTR ERV1 237 382 0 1 616 425 303 33 60 chr13 4098184 4098335 -116185977 + B1F1 SINE Alu 3 149 0 1 616 279 276 129 8 chr13 4098351 4098475 -116185837 + B1F1 SINE Alu 2 140 -9 1 616 1227 61 0 0 chr13 4098500 4098714 -116185598 + (CA)n Simple_repeat Simple_repeat 1 214 0 1 616 291 270 39 29 chr13 4099364 4099467 -116184845 + RMER12 LTR ERVK 745 848 -474 1 616 414 245 82 1 chr13 4099567 4099750 -116184562 - Lx7 LINE L1 -475 5825 5646 1 616 205 133 0 0 chr13 4100371 4100401 -116183911 - MIR SINE MIR -66 142 113 1 616 213 94 0 0 chr13 4100476 4100508 -116183804 + (T)n Simple_repeat Simple_repeat 1 32 0 1 616 1576 190 39 97 chr13 4101349 4101701 -116182611 + ORR1B1 LTR MaLR 3 340 -54 1 616 192 77 0 0 chr13 4101701 4101727 -116182585 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 616 1576 190 39 97 chr13 4101727 4101788 -116182524 + ORR1B1 LTR MaLR 341 392 -2 1 616 198 140 148 66 chr13 4101942 4102003 -116182309 + L3 LINE CR1 146 211 -4278 1 616 4257 213 17 34 chr13 4102453 4103395 -116180917 - RodERV21-int LTR ERV1 -522 4469 3544 1 616 1332 142 0 9 chr13 4103470 4103684 -116180628 - RodERV21-int LTR ERV1 -1459 3532 3321 1 616 656 222 31 72 chr13 4103679 4103873 -116180439 - RodERV21-int LTR ERV1 -4588 403 218 1 616 231 128 0 21 chr13 4103875 4103923 -116180389 - RMER4A LTR ERVK -2 464 418 1 616 7582 110 24 1 chr13 4103923 4105322 -116178990 - Lx3C LINE L1 -159 6817 5379 1 616 662 117 19 0 chr13 4105322 4105425 -116178887 - MurERV4-int LTR ERVK -3296 1964 1860 1 616 2481 156 0 7 chr13 4105451 4105872 -116178440 - MurERV4-int LTR ERVK -3624 1636 1219 1 616 2302 165 30 22 chr13 4105872 4106331 -116177981 + MurERV4-int LTR ERVK 42 504 -4756 1 616 5697 179 30 35 chr13 4106330 4106402 -116177910 - MurERV4-int LTR ERVK -4050 1210 1150 1 616 423 38 0 0 chr13 4106402 4106455 -116177857 + (CCAA)n Simple_repeat Simple_repeat 2 54 0 1 616 5697 179 30 35 chr13 4106455 4107421 -116176891 - MurERV4-int LTR ERVK -4111 1149 199 1 616 195 69 0 0 chr13 4107421 4107450 -116176862 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 616 5697 179 30 35 chr13 4107450 4107625 -116176687 - MurERV4-int LTR ERVK -5062 198 3 1 616 2558 169 17 30 chr13 4107635 4107716 -116176596 - RMER4A LTR ERVK -9 457 379 1 616 1636 197 176 131 chr13 4107716 4108405 -116175907 + RMER6D LTR ERVK 1 720 0 1 616 2558 169 17 30 chr13 4108405 4108786 -116175526 - RMER4A LTR ERVK -88 378 1 1 616 268 242 15 0 chr13 4108786 4108852 -116175460 - RodERV21-int LTR ERV1 -4768 223 157 1 616 3484 141 18 13 chr13 4108853 4109528 -116174784 - L1_Mur3 LINE L1 -1359 4521 3844 1 616 207 0 0 0 chr13 4109543 4109566 -116174746 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 1 616 188 35 35 0 chr13 4110352 4110381 -116173931 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1 616 4204 62 2 7 chr13 4110385 4110924 -116173388 - L1Md_F2 LINE L1 -5 6577 6042 1 616 306 67 0 0 chr13 4110968 4111013 -116173299 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 616 3435 197 57 7 chr13 4111014 4111822 -116172490 - L1_Mur3 LINE L1 -3826 2054 1207 1 616 1180 263 70 35 chr13 4111854 4112393 -116171919 - L1_Mur3 LINE L1 -6465 1263 424 1 616 654 269 89 10 chr13 4112754 4112957 -116171355 - ID_B1 SINE B4 -5 219 1 1 616 276 111 0 0 chr13 4113770 4113815 -116170497 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 1 616 246 370 14 14 chr13 4114532 4114606 -116169706 + RSINE1 SINE B4 3 76 -89 1 616 180 111 0 0 chr13 4115011 4115038 -116169274 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 616 222 150 0 0 chr13 4115139 4115179 -116169133 + (TATG)n Simple_repeat Simple_repeat 4 43 0 1 616 428 343 17 0 chr13 4115183 4115358 -116168954 + (TG)n Simple_repeat Simple_repeat 1 178 0 1 616 598 376 65 14 chr13 4115369 4115647 -116168665 - B4A SINE B4 0 292 1 1 616 1309 179 21 39 chr13 4116541 4116879 -116167433 + Lx9 LINE L1 7305 7636 -8 1 616 30 0 0 0 chr13 4116879 4116909 -116167403 + AT_rich Low_complexity Low_complexity 1 30 0 1 616 1018 159 1 0 chr13 4116963 4117148 -116167164 - Lx5 LINE L1 -1087 5963 5773 1 616 22 70 0 0 chr13 4117390 4117433 -116166879 + AT_rich Low_complexity Low_complexity 1 43 0 1 616 27 29 0 0 chr13 4118112 4118146 -116166166 + AT_rich Low_complexity Low_complexity 1 34 0 1 616 294 337 94 10 chr13 4118153 4118249 -116166063 - ID_B1 SINE B4 -35 189 86 1 616 271 333 144 39 chr13 4118527 4118680 -116165632 + MIRb SINE MIR 85 253 -15 1 616 549 284 111 45 chr13 4119372 4119571 -116164741 - ID_B1 SINE B4 -8 216 5 1 616 407 127 42 0 chr13 4119861 4119932 -116164380 - URR1B DNA MER1_type 0 225 152 1 616 287 219 109 50 chr13 4121276 4121377 -116162935 - PB1D7 SINE Alu -13 107 1 1 616 310 269 15 0 chr13 4121995 4122062 -116162250 - ID4 SINE ID -10 73 6 1 616 658 160 68 15 chr13 4122360 4122493 -116161819 - RLTR9E LTR ERVK 0 393 254 1 616 5192 136 12 11 chr13 4122504 4123454 -116160858 + RLTR13A LTR ERVK 8 958 0 1 616 870 133 218 0 chr13 4123468 4123679 -116160633 - RLTR9E LTR ERVK -147 262 6 1 616 510 53 25 62 chr13 4123692 4123773 -116160539 - ETnERV2-int LTR ERVK 0 7406 7329 1 616 947 203 220 6 chr13 4123773 4124086 -116160226 - RLTR13D6 LTR ERVK -365 537 158 1 616 4690 114 35 3 chr13 4124087 4124746 -116159566 - ETnERV2-int LTR ERVK -234 7172 6493 1 616 4281 182 57 61 chr13 4124777 4127791 -116156521 - MMETn-int LTR ERVK -3321 4085 1837 1 616 23 0 0 0 chr13 4128076 4128099 -116156213 + AT_rich Low_complexity Low_complexity 1 23 0 1 616 2284 111 6 0 chr13 4129152 4129484 -116154828 - Lx2 LINE L1 0 6997 6664 1 616 22 0 0 0 chr13 4131876 4131898 -116152414 + AT_rich Low_complexity Low_complexity 1 22 0 1 616 553 312 7 0 chr13 4132440 4132578 -116151734 + RSINE1 SINE B4 2 140 -25 1 616 1150 75 0 0 chr13 4132669 4132816 -116151496 - B1_Mus2 SINE Alu 0 147 1 1 616 428 284 78 38 chr13 4133317 4133770 -116150542 + L1MA4 LINE L1 5704 6159 -1314 1 616 24 32 0 0 chr13 4134548 4134579 -116149733 + AT_rich Low_complexity Low_complexity 1 31 0 1 616 30 69 0 0 chr13 4135056 4135114 -116149198 + AT_rich Low_complexity Low_complexity 1 58 0 1 616 1836 39 0 21 chr13 4135238 4135472 -116148840 + L1_Mus1 LINE L1 6338 6566 -1 1 616 405 58 0 0 chr13 4135481 4135533 -116148779 + (GAAAA)n Simple_repeat Simple_repeat 4 55 0 1 616 294 206 0 0 chr13 4135754 4135817 -116148495 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 1 616 561 90 0 0 chr13 4136044 4136133 -116148179 + (TC)n Simple_repeat Simple_repeat 1 89 0 1 616 357 24 0 0 chr13 4136133 4136175 -116148137 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 616 633 153 0 0 chr13 4136955 4136968 -116147344 + polypurine Low_complexity Low_complexity 1 13 0 1 616 297 0 0 0 chr13 4136968 4137001 -116147311 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 616 633 153 0 0 chr13 4137001 4137137 -116147175 + GA-rich Low_complexity Low_complexity 14 149 0 1 616 390 281 76 6 chr13 4137297 4137469 -116146843 + Lx9 LINE L1 7255 7438 -206 1 616 2568 178 75 36 chr13 4137473 4137508 -116146804 + Lx7 LINE L1 5240 5271 -609 1 616 928 166 25 20 chr13 4137508 4137705 -116146607 + L1Md_F3 LINE L1 6378 6575 -9 1 616 8903 206 53 44 chr13 4137705 4140118 -116144194 + Lx7 LINE L1 5272 7693 -3 1 616 1390 164 0 18 chr13 4140485 4140714 -116143598 + URR1A DNA MER1_type 1 225 -1 1 616 720 307 71 55 chr13 4141911 4142401 -116141911 - Lx8 LINE L1 -6 7467 6970 1 616 345 24 0 0 chr13 4143248 4143290 -116141022 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 616 519 17 0 0 chr13 4143290 4143349 -116140963 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 616 279 167 0 0 chr13 4143349 4143391 -116140921 - RSINE1 SINE B4 -44 121 80 1 616 23 0 0 0 chr13 4143999 4144022 -116140290 + AT_rich Low_complexity Low_complexity 1 23 0 1 616 21 36 0 0 chr13 4144120 4144148 -116140164 + AT_rich Low_complexity Low_complexity 1 28 0 1 616 185 0 40 0 chr13 4145493 4145518 -116138794 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 1 616 2300 99 26 3 chr13 4145553 4145899 -116138413 + L1_Mus4 LINE L1 6273 6626 -10 1 616 716 352 38 3 chr13 4145931 4146250 -116138062 + Lx8 LINE L1 6519 6848 -625 1 616 393 173 46 46 chr13 4146314 4146423 -116137889 + Lx9 LINE L1 7536 7644 0 1 616 333 262 117 0 chr13 4146570 4146594 -116137718 + B3 SINE B2 47 70 -146 1 616 444 37 0 0 chr13 4146594 4146648 -116137664 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 616 333 262 117 0 chr13 4146648 4146726 -116137586 + B3 SINE B2 71 159 -57 1 616 24 53 0 0 chr13 4146909 4146947 -116137365 + AT_rich Low_complexity Low_complexity 1 38 0 2 616 594 105 0 0 chr13 4146972 4147077 -116137235 + (GA)n Simple_repeat Simple_repeat 2 106 0 2 616 608 315 68 57 chr13 4148332 4148646 -116135666 - L1MA4 LINE L1 -180 6120 5799 2 616 285 128 0 0 chr13 4148646 4148693 -116135619 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 616 608 315 68 57 chr13 4148693 4148909 -116135403 - L1MA4 LINE L1 -502 5798 5584 2 616 796 328 48 22 chr13 4148905 4149360 -116134952 + L1M2 LINE L1 4755 5221 -922 2 616 609 258 16 0 chr13 4151407 4151535 -116132777 + B3 SINE B2 1 130 -86 2 616 270 313 127 9 chr13 4151693 4151922 -116132390 + L1M2 LINE L1 5630 5885 -286 2 616 542 290 94 63 chr13 4152208 4152691 -116131621 + L1M4 LINE L1 4625 5130 -1016 2 616 607 292 29 15 chr13 4152691 4152896 -116131416 - B3 SINE B2 -6 210 3 2 616 542 290 94 63 chr13 4152896 4152953 -116131359 + L1M4 LINE L1 5131 5182 -964 2 616 2254 284 118 16 chr13 4152962 4153730 -116130582 + Lx8 LINE L1 6294 7140 -333 2 616 679 155 24 124 chr13 4153739 4153908 -116130404 - RLTR25A LTR ERVK 0 1103 952 2 616 947 34 0 8 chr13 4153918 4154038 -116130274 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 2 616 693 0 0 0 chr13 4154041 4154118 -116130194 + (TTTCC)n Simple_repeat Simple_repeat 4 80 0 2 616 429 20 0 0 chr13 4154119 4154169 -116130143 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 616 526 76 31 42 chr13 4154174 4154270 -116130042 - Lx LINE L1 -8 6646 6552 2 616 281 138 176 7 chr13 4154291 4154376 -116129936 - Lx2 LINE L1 -12 6985 6897 2 616 624 195 23 15 chr13 4154418 4154548 -116129764 + RLTR25B LTR ERVK 141 271 -757 2 616 4152 160 72 54 chr13 4154552 4155418 -116128894 - RLTR25A LTR ERVK -220 883 3 2 616 353 340 63 14 chr13 4155419 4155562 -116128750 + Lx8 LINE L1 7146 7295 -178 2 616 23 0 0 0 chr13 4155659 4155682 -116128630 + AT_rich Low_complexity Low_complexity 1 23 0 2 616 1864 122 9 59 chr13 4155689 4156028 -116128284 - RLTRETN_Mm LTR ERVK 0 322 1 2 616 2001 117 9 21 chr13 4156028 4156359 -116127953 - MMETn-int LTR ERVK 0 4844 4518 2 616 997 109 0 0 chr13 4156360 4156498 -116127814 - ETnERV-int LTR ERVK -417 2897 2760 2 616 311 319 75 18 chr13 4157086 4157364 -116126948 + L1M3 LINE L1 4760 5053 -1087 2 616 24 0 0 0 chr13 4157825 4157849 -116126463 + AT_rich Low_complexity Low_complexity 1 24 0 2 616 333 282 50 56 chr13 4158158 4158300 -116126012 - L1_Rod LINE L1 -535 5633 5429 2 616 23 0 0 0 chr13 4158395 4158418 -116125894 + AT_rich Low_complexity Low_complexity 1 23 0 2 616 1182 112 0 0 chr13 4158764 4158942 -116125370 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2 616 216 48 23 45 chr13 4158944 4158988 -116125324 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 2 616 493 300 43 5 chr13 4159150 4159361 -116124951 - Lx7 LINE L1 -1837 5859 5641 2 616 338 167 36 14 chr13 4159935 4160075 -116124237 + (TCTG)n Simple_repeat Simple_repeat 2 144 0 2 616 441 0 0 0 chr13 4160946 4160995 -116123317 + (TTCC)n Simple_repeat Simple_repeat 1 49 0 2 616 613 144 0 9 chr13 4160995 4161100 -116123212 - BC1_Mm scRNA scRNA -48 104 1 2 616 325 299 0 36 chr13 4161210 4161306 -116123006 + B3A SINE B2 1 93 -123 2 616 2486 216 49 18 chr13 4161306 4162070 -116122242 - Lx6 LINE L1 -1201 6259 5471 2 616 363 263 26 26 chr13 4162345 4162462 -116121850 - Lx6 LINE L1 -7266 462 346 2 616 305 297 43 11 chr13 4162465 4162557 -116121755 + B3A SINE B2 86 180 -18 2 616 423 0 0 0 chr13 4162560 4162607 -116121705 + (CATA)n Simple_repeat Simple_repeat 4 50 0 2 616 725 230 94 17 chr13 4162656 4162837 -116121475 - RMER1B Other Other 0 1066 872 2 616 1596 276 39 12 chr13 4163000 4163626 -116120686 - Lx7 LINE L1 -1569 6127 5486 2 616 1164 241 19 52 chr13 4163616 4163846 -116120466 - Lx7 LINE L1 -563 5317 5094 2 616 3099 154 6 4 chr13 4163846 4164355 -116119957 - Lx4A LINE L1 -2 7056 6547 2 616 1164 241 19 52 chr13 4164355 4164492 -116119820 - Lx7 LINE L1 -787 5093 4962 2 616 1467 281 23 16 chr13 4164491 4164918 -116119394 + Lx7 LINE L1 6884 7313 -383 2 616 378 0 0 0 chr13 4164958 4165000 -116119312 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 616 24 0 0 0 chr13 4165097 4165121 -116119191 + AT_rich Low_complexity Low_complexity 1 24 0 2 616 23 0 0 0 chr13 4165227 4165250 -116119062 + AT_rich Low_complexity Low_complexity 1 23 0 2 616 387 355 77 66 chr13 4165256 4165621 -116118691 + MER68 LTR ERVL 183 551 -12 2 616 24 0 0 0 chr13 4166329 4166353 -116117959 + AT_rich Low_complexity Low_complexity 1 24 0 2 616 551 102 0 11 chr13 4167039 4167128 -116117184 + (GA)n Simple_repeat Simple_repeat 1 88 0 2 616 3028 93 2 16 chr13 4167444 4167891 -116116421 + BGLII_B LTR ERVK 1 441 0 2 616 285 242 82 21 chr13 4168580 4168677 -116115635 + RLTR19C LTR ERVK 33 135 -371 2 616 269 352 28 0 chr13 4168844 4168952 -116115360 + RLTR33 LTR ERVK 483 593 -85 2 616 1547 181 29 93 chr13 4169118 4169496 -116114816 - RMER15 LTR ERVL -221 354 1 2 616 316 274 23 3 chr13 4170367 4170461 -116113851 - MLT2B2 LTR ERVL -89 478 376 2 616 415 284 0 59 chr13 4170518 4170577 -116113735 - B4 SINE B4 -197 95 42 2 616 4473 173 65 47 chr13 4170577 4171003 -116113309 + RLTR13D2 LTR ERVK 1 411 -612 2 616 1174 68 0 0 chr13 4171003 4171150 -116113162 - B1_Mm SINE Alu 0 147 1 2 616 4473 173 65 47 chr13 4171150 4171728 -116112584 + RLTR13D2 LTR ERVK 412 1023 0 2 616 415 284 0 59 chr13 4171728 4171769 -116112543 - B4 SINE B4 -251 41 1 2 616 1041 150 0 0 chr13 4171845 4172025 -116112287 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 616 477 295 55 4 chr13 4174622 4174857 -116109455 - MYSERV6-int LTR ERVK -4347 4612 4366 2 616 3169 89 22 4 chr13 4174978 4175429 -116108883 - L1Md_F2 LINE L1 -1 6581 6123 2 616 834 105 0 0 chr13 4175429 4175553 -116108759 + L1Md_F2 LINE L1 6020 6143 -439 2 616 2594 31 0 0 chr13 4175996 4176318 -116107994 - L1Md_F2 LINE L1 -499 6083 5762 2 616 561 13 13 0 chr13 4176318 4176393 -116107919 + L1Md_T LINE L1 6507 6582 0 2 616 208 0 62 0 chr13 4176396 4176428 -116107884 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 616 599 211 67 8 chr13 4176474 4176608 -116107704 + B1_Mur3 SINE Alu 5 146 -3 2 616 441 0 0 0 chr13 4176644 4176693 -116107619 + (CAAG)n Simple_repeat Simple_repeat 2 50 0 2 616 317 24 24 0 chr13 4177159 4177201 -116107111 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 616 261 332 132 42 chr13 4178212 4178501 -116105811 + L2 LINE L2 2382 2696 -723 2 616 3772 112 6 1 chr13 4178631 4179303 -116105009 - Lx3B LINE L1 -1003 5970 5297 2 616 2415 127 5 15 chr13 4179299 4179708 -116104604 + Lx3B LINE L1 5971 6375 -598 2 616 598 130 26 7 chr13 4180181 4180336 -116103976 + (TCTA)n Simple_repeat Simple_repeat 3 160 0 2 616 847 237 98 115 chr13 4180336 4180736 -116103576 + RLTRETN_Mm LTR ERVK 1 393 0 2 616 6261 117 27 59 chr13 4180737 4181943 -116102369 + MMETn-int LTR ERVK 2 1169 -3675 2 616 1672 188 10 31 chr13 4181941 4182325 -116101987 + ETnERV2-int LTR ERVK 2628 3003 -4403 2 616 751 135 56 21 chr13 4182325 4182469 -116101843 + RLTR13D1 LTR ERVK 502 650 -156 2 616 5067 147 28 13 chr13 4182992 4184651 -116099661 + MMETn-int LTR ERVK 2356 4085 -3321 2 616 5385 179 28 38 chr13 4184620 4185656 -116098656 + MMETn-int LTR ERVK 6127 7152 -254 2 616 550 245 70 16 chr13 4185659 4185845 -116098467 + RLTR13B1 LTR ERVK 125 300 -629 2 616 245 188 141 28 chr13 4185869 4185940 -116098372 + RLTR13B1 LTR ERVK 459 537 -365 2 616 452 117 0 0 chr13 4185940 4186017 -116098295 + MMETn-int LTR ERVK 7329 7405 -1 2 616 867 228 67 60 chr13 4186017 4186408 -116097904 + RLTRETN_Mm LTR ERVK 1 393 0 2 616 348 77 0 0 chr13 4186411 4186463 -116097849 + (CTAAT)n Simple_repeat Simple_repeat 4 55 0 2 616 688 44 44 0 chr13 4186466 4186579 -116097733 + (TCTA)n Simple_repeat Simple_repeat 4 121 0 2 616 333 310 64 23 chr13 4186635 4186853 -116097459 + L1ME1 LINE L1 5728 5954 -225 2 616 2066 171 127 9 chr13 4186869 4187533 -116096779 - Lx5 LINE L1 -3 7047 6306 2 616 583 298 78 0 chr13 4187540 4187731 -116096581 - B3 SINE B2 -10 206 1 2 616 416 301 72 78 chr13 4188140 4188306 -116096006 + B3A SINE B2 1 165 -33 2 616 3423 118 32 2 chr13 4188536 4189069 -116095243 + Lx2A1 LINE L1 6455 7003 -5 2 616 3709 166 64 10 chr13 4189152 4189424 -116094888 - Lx4B LINE L1 -5 7053 6766 2 616 342 0 0 0 chr13 4189424 4189462 -116094850 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 616 3709 166 64 10 chr13 4189462 4189891 -116094421 - Lx4B LINE L1 -293 6765 6316 2 616 309 51 0 0 chr13 4191009 4191048 -116093264 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 2 616 480 157 0 0 chr13 4191404 4191487 -116092825 + URR1B DNA MER1_type 143 225 0 2 616 356 294 175 28 chr13 4192155 4192407 -116091905 - B4A SINE B4 -2 290 2 2 616 22 80 0 0 chr13 4193558 4193608 -116090704 + AT_rich Low_complexity Low_complexity 1 50 0 2 617 180 0 0 0 chr13 4194663 4194683 -116089629 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 617 396 0 0 0 chr13 4194683 4194727 -116089585 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 617 399 41 0 0 chr13 4195005 4195054 -116089258 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 617 301 227 100 8 chr13 4195060 4195180 -116089132 + Lx9 LINE L1 7506 7636 -8 2 617 183 42 0 0 chr13 4195364 4195388 -116088924 + (A)n Simple_repeat Simple_repeat 1 24 0 2 617 694 292 62 6 chr13 4195422 4195601 -116088711 - B3 SINE B2 -27 189 1 2 617 1402 278 33 3 chr13 4197263 4197631 -116086681 - MTE2a LTR MaLR 0 379 1 2 617 224 224 0 0 chr13 4198097 4198146 -116086166 + (TATG)n Simple_repeat Simple_repeat 2 50 0 2 617 292 353 66 13 chr13 4198425 4198577 -116085735 - MLT1H LTR MaLR -339 210 51 2 617 21 0 0 0 chr13 4198670 4198691 -116085621 + AT_rich Low_complexity Low_complexity 1 21 0 2 617 3491 34 0 7 chr13 4198694 4199111 -116085201 - L1Md_F3 LINE L1 -17 6567 6154 2 617 10197 108 102 15 chr13 4199668 4200104 -116084208 - L1VL2 LINE L1 -631 2984 2507 2 617 198 0 0 0 chr13 4200104 4200126 -116084186 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2 617 10197 106 78 10 chr13 4200126 4202090 -116082222 - L1VL2 LINE L1 -1109 2506 401 2 617 932 112 191 6 chr13 4203013 4203175 -116081137 + RMER6B LTR ERVK 1 192 -269 2 617 2696 161 15 9 chr13 4203219 4203677 -116080635 - RMER6B LTR ERVK 0 461 1 2 617 215 111 54 36 chr13 4203733 4203789 -116080523 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 2 617 27 29 0 0 chr13 4204385 4204419 -116079893 + AT_rich Low_complexity Low_complexity 1 34 0 2 617 224 30 0 29 chr13 4204861 4204895 -116079417 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 617 868 77 0 0 chr13 4205035 4205165 -116079147 + MusHAL1 LINE L1 319 448 -2264 2 617 1198 236 167 72 chr13 4205878 4206165 -116078147 - RMER4B LTR ERVK -9 576 256 2 617 1112 116 3 6 chr13 4206165 4206342 -116077970 + (TTC)n Simple_repeat Simple_repeat 1 179 -174 2 617 1112 116 3 6 chr13 4206349 4206519 -116077793 + (TTC)n Simple_repeat Simple_repeat 180 353 0 2 617 1198 236 167 72 chr13 4206519 4206749 -116077563 - RMER4B LTR ERVK -337 248 1 2 617 587 290 59 72 chr13 4206749 4207029 -116077283 + B4 SINE B4 30 275 -17 3 617 6387 187 76 30 chr13 4207408 4210841 -116073471 + L1VL4 LINE L1 536 4135 -1748 3 617 189 121 0 0 chr13 4210846 4210879 -116073433 + (C)n Simple_repeat Simple_repeat 1 33 0 3 617 963 208 31 42 chr13 4210931 4211217 -116073095 + RLTRETN_Mm LTR ERVK 40 322 0 3 617 3992 180 42 90 chr13 4211218 4212417 -116071895 + MMETn-int LTR ERVK 1 1142 -3702 3 617 546 272 5 65 chr13 4212446 4212631 -116071681 + ETnERV2-int LTR ERVK 2435 2608 -4798 3 617 1980 128 14 117 chr13 4212631 4213096 -116071216 + ETnERV2-int LTR ERVK 3055 3441 -3965 3 617 3474 163 45 58 chr13 4213342 4214637 -116069675 + ETnERV2-int LTR ERVK 2356 4085 -3321 3 617 987 119 4 66 chr13 4214635 4214862 -116069450 + ETnERV2-int LTR ERVK 2982 3141 -1703 3 617 6338 115 18 4 chr13 4214927 4215860 -116068452 + ETnERV2-int LTR ERVK 6222 7167 -239 3 617 751 228 115 38 chr13 4215860 4216147 -116068165 + RLTR13D6 LTR ERVK 127 435 -467 3 617 230 216 118 0 chr13 4216163 4216214 -116068098 + RLTR13D6 LTR ERVK 481 537 -365 3 617 427 80 38 62 chr13 4216214 4216294 -116068018 + ETnERV2-int LTR ERVK 7329 7406 0 3 617 819 189 222 52 chr13 4216305 4216634 -116067678 + RLTRETN_Mm LTR ERVK 7 391 -18 3 617 4343 127 7 3 chr13 4216643 4217383 -116066929 + L1_Mus1 LINE L1 4130 4872 -1011 3 617 654 13 0 0 chr13 4217383 4217458 -116066854 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 3 617 7720 35 1 1 chr13 4217465 4218883 -116065429 - L1Md_F2 LINE L1 -13 6569 5152 3 617 1851 124 10 0 chr13 4218884 4219191 -116065121 + L1_Mus1 LINE L1 4862 5171 -712 3 617 7084 76 19 0 chr13 4219176 4220285 -116064027 + L1_Mus1 LINE L1 5436 6567 0 3 617 242 115 19 0 chr13 4220292 4220344 -116063968 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 617 9648 111 9 6 chr13 4220345 4222705 -116061607 + L1_Mus3 LINE L1 4270 6637 -1 3 617 1835 114 12 60 chr13 4222939 4223275 -116061037 - RLTRETN_Mm LTR ERVK 0 322 3 3 617 729 100 0 0 chr13 4223278 4223388 -116060924 + RLTRETN_Mm LTR ERVK 213 322 0 3 617 576 28 0 0 chr13 4223390 4223461 -116060851 - tRNA-Lys-AAG tRNA tRNA 0 76 6 3 617 518 75 50 0 chr13 4223456 4223536 -116060776 - RLTRETN_Mm LTR ERVK -238 84 1 3 617 2015 179 44 29 chr13 4224626 4224668 -116059644 - ORR1B1 LTR MaLR -2 392 352 3 617 2908 98 65 19 chr13 4224668 4225086 -116059226 + RLTR9B LTR ERVK 1 437 0 3 617 2015 179 44 29 chr13 4225086 4225429 -116058883 - ORR1B1 LTR MaLR -43 351 1 3 617 1120 68 0 0 chr13 4225772 4225919 -116058393 + B1_Mus2 SINE Alu 1 147 0 3 617 243 0 0 0 chr13 4225919 4225946 -116058366 + (A)n Simple_repeat Simple_repeat 1 27 0 3 617 3289 203 60 39 chr13 4226272 4226995 -116057317 - Lx5 LINE L1 -7 7043 6306 3 617 261 0 0 0 chr13 4228296 4228325 -116055987 + (TCC)n Simple_repeat Simple_repeat 2 30 0 3 617 28 29 0 0 chr13 4228765 4228800 -116055512 + AT_rich Low_complexity Low_complexity 1 35 0 3 617 405 0 0 0 chr13 4228809 4228854 -116055458 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 617 329 275 0 62 chr13 4228899 4228996 -116055316 - RSINE1 SINE B4 -63 102 12 3 617 412 253 0 0 chr13 4229028 4229107 -116055205 - ID4_ SINE ID -1 82 4 3 617 314 306 97 70 chr13 4229524 4229823 -116054489 + MER50-int LTR ERV1 1657 1963 -5242 3 617 252 143 0 0 chr13 4230454 4230496 -116053816 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 617 389 154 12 25 chr13 4230908 4230988 -116053324 + B3 SINE B2 33 111 -105 3 617 623 181 17 0 chr13 4231059 4231175 -116053137 + B2_Mm2 SINE B2 12 129 -66 3 617 1675 221 51 23 chr13 4231661 4232050 -116052262 - Lx9 LINE L1 -533 7111 6712 3 617 781 251 59 0 chr13 4233997 4234184 -116050128 + B3 SINE B2 2 199 -17 3 617 203 259 0 33 chr13 4234334 4234394 -116049918 + CT-rich Low_complexity Low_complexity 3 60 0 3 617 428 248 191 8 chr13 4234394 4234520 -116049792 - B1_Mur1 SINE Alu 0 149 1 3 617 241 291 18 88 chr13 4234421 4234534 -116049778 - MT2B LTR ERVL -345 256 152 3 617 22 35 0 0 chr13 4236147 4236176 -116048136 + AT_rich Low_complexity Low_complexity 1 29 0 3 617 284 0 0 27 chr13 4237400 4237437 -116046875 + (TAA)n Simple_repeat Simple_repeat 3 38 0 3 617 21 36 0 0 chr13 4238606 4238634 -116045678 + AT_rich Low_complexity Low_complexity 1 28 0 3 617 1266 211 8 4 chr13 4238648 4238909 -116045403 - Lx4B LINE L1 -258 6800 6539 3 617 5174 130 0 2 chr13 4239274 4240093 -116044219 + L1_Mur2 LINE L1 3481 4297 -1580 3 617 4537 165 15 12 chr13 4240101 4240922 -116043390 + L1_Mm LINE L1 4749 5571 -312 3 617 60 64 0 0 chr13 4240951 4241060 -116043252 + AT_rich Low_complexity Low_complexity 1 109 0 3 617 333 47 0 0 chr13 4241177 4241220 -116043092 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 617 235 324 40 0 chr13 4241263 4241337 -116042975 - RSINE1 SINE B4 -84 81 5 3 617 268 340 57 0 chr13 4241981 4242087 -116042225 - MER5A DNA MER1_type -76 113 2 3 617 880 275 19 5 chr13 4242731 4242943 -116041369 - B3 SINE B2 0 216 2 3 617 509 323 78 50 chr13 4243473 4243728 -116040584 + B4A SINE B4 2 269 -23 3 617 369 0 0 0 chr13 4243728 4243769 -116040543 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 617 509 323 78 50 chr13 4243769 4243796 -116040516 + B4A SINE B4 270 292 0 3 617 268 331 15 30 chr13 4244190 4244324 -116039988 + Lx9 LINE L1 7217 7348 -296 3 617 802 171 34 193 chr13 4244424 4244807 -116039505 - RLTRETN_Mm LTR ERVK 0 322 1 3 617 257 250 51 43 chr13 4244855 4244993 -116039319 + Lx9 LINE L1 7506 7644 0 3 617 22 0 0 0 chr13 4245204 4245226 -116039086 + AT_rich Low_complexity Low_complexity 1 22 0 3 617 214 255 10 20 chr13 4245420 4245520 -116038792 + CT-rich Low_complexity Low_complexity 3 101 0 3 617 32 0 0 0 chr13 4245550 4245582 -116038730 + AT_rich Low_complexity Low_complexity 1 32 0 3 617 259 154 0 0 chr13 4246405 4246444 -116037868 - Lx4B LINE L1 -142 6916 6878 3 617 403 230 59 10 chr13 4249035 4249136 -116035176 - Lx7 LINE L1 -918 6778 6673 3 617 911 129 0 7 chr13 4249135 4249275 -116035037 - Lx2B LINE L1 -317 6683 6545 3 617 1922 219 95 2 chr13 4249270 4249713 -116034599 + Lx2B LINE L1 6045 6528 -472 3 617 2017 153 94 66 chr13 4249707 4250205 -116034107 - L1_Mur2 LINE L1 -1725 4152 3641 3 617 643 261 0 50 chr13 4250202 4250400 -116033912 - Lx5 LINE L1 -748 6302 6115 3 617 9213 171 25 25 chr13 4250413 4252356 -116031956 - L1_Mur3 LINE L1 -1561 4319 2377 3 617 292 236 14 14 chr13 4252354 4252427 -116031885 - L1_Mur3 LINE L1 -6636 1092 1020 3 617 2307 280 42 21 chr13 4252417 4253136 -116031176 - L1_Mur3 LINE L1 -6832 896 163 3 617 2101 250 60 14 chr13 4253135 4254134 -116030178 - L1_Mur3 LINE L1 -7062 650 4 3 617 327 167 175 0 chr13 4254163 4254283 -116030029 - Lx9 LINE L1 -1 7643 7503 3 617 301 174 85 59 chr13 4254284 4254437 -116029875 + (TTATG)n Simple_repeat Simple_repeat 4 160 0 3 617 703 189 5 82 chr13 4254437 4254621 -116029691 - Lx9 LINE L1 -144 7500 7331 3 617 331 334 32 15 chr13 4255189 4255437 -116028875 - L1M2 LINE L1 -1110 5030 4771 3 617 378 322 45 51 chr13 4255677 4256033 -116028279 - L1MA6 LINE L1 -199 6101 5748 3 617 430 274 89 0 chr13 4256051 4256208 -116028104 - L1_Mur3 LINE L1 -3552 2328 2158 3 617 2039 211 164 96 chr13 4256607 4257465 -116026847 + RMER17B LTR ERVK 1 882 -76 3 617 520 332 19 4 chr13 4257511 4257768 -116026544 - L1_Mur3 LINE L1 -3913 1967 1707 3 617 20477 20 2 0 chr13 4257764 4260828 -116023484 - L1Md_T LINE L1 0 6582 3513 3 617 5048 50 1 18 chr13 4260802 4261474 -116022838 + L1_Mm LINE L1 2530 3190 -2693 3 617 232 317 43 0 chr13 4261471 4261657 -116022655 - L1_Mur3 LINE L1 -4160 1720 1527 3 617 23 33 0 0 chr13 4261826 4261856 -116022456 + AT_rich Low_complexity Low_complexity 1 30 0 3 617 1591 237 45 22 chr13 4262044 4262445 -116021867 + Lx6 LINE L1 6378 6787 -673 3 617 28 0 0 0 chr13 4262892 4262920 -116021392 + AT_rich Low_complexity Low_complexity 1 28 0 3 617 485 302 66 152 chr13 4263070 4263359 -116020953 - B4 SINE B4 0 292 29 3 617 707 221 131 10 chr13 4263366 4263572 -116020740 + RMER4B LTR ERVK 17 247 -338 3 617 525 231 21 18 chr13 4263597 4263875 -116020437 + GA-rich Low_complexity Low_complexity 1 278 0 3 617 181 176 0 42 chr13 4263877 4263948 -116020364 + (CTG)n Simple_repeat Simple_repeat 3 70 0 3 617 413 271 15 76 chr13 4264031 4264163 -116020149 + RMER4B LTR ERVK 453 576 -9 3 617 982 186 92 12 chr13 4264594 4264834 -116019478 + Lx9 LINE L1 7341 7599 -45 3 617 1046 203 65 0 chr13 4264854 4265071 -116019241 - RMER1B Other Other -825 241 11 3 617 23 54 0 0 chr13 4265644 4265681 -116018631 + AT_rich Low_complexity Low_complexity 1 37 0 3 617 310 110 13 27 chr13 4266021 4266096 -116018216 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 3 617 186 43 0 0 chr13 4266272 4266295 -116018017 + (T)n Simple_repeat Simple_repeat 1 23 0 3 617 848 249 69 5 chr13 4266839 4267041 -116017271 + B3 SINE B2 2 216 0 3 617 22 70 0 0 chr13 4267041 4267084 -116017228 + AT_rich Low_complexity Low_complexity 1 43 0 3 617 21 57 0 0 chr13 4268269 4268304 -116016008 + AT_rich Low_complexity Low_complexity 1 35 0 3 617 2121 147 86 43 chr13 4268482 4268922 -116015390 + RMER6B LTR ERVK 1 459 -2 3 617 702 108 0 0 chr13 4268960 4269062 -116015250 - RMER6B LTR ERVK -259 202 101 3 617 40 37 0 0 chr13 4270940 4270994 -116013318 + AT_rich Low_complexity Low_complexity 1 54 0 3 617 255 61 0 0 chr13 4271048 4271081 -116013231 + (TATG)n Simple_repeat Simple_repeat 2 34 0 3 617 1348 257 77 3 chr13 4271731 4272067 -116012245 + MTE2b LTR MaLR 19 379 0 3 617 1006 221 49 0 chr13 4273748 4273952 -116010360 + B3 SINE B2 1 214 -2 3 617 22 35 0 0 chr13 4274102 4274131 -116010181 + AT_rich Low_complexity Low_complexity 1 29 0 3 617 385 154 8 127 chr13 4274151 4274285 -116010027 - Lx9 LINE L1 -8 7636 7519 3 617 227 93 23 0 chr13 4274287 4274330 -116009982 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 617 321 298 105 17 chr13 4276513 4276694 -116007618 + B4A SINE B4 2 198 -94 3 617 1038 161 102 0 chr13 4277434 4277639 -116006673 - URR1A DNA MER1_type 0 226 1 3 617 218 154 19 19 chr13 4277952 4278005 -116006307 + A-rich Low_complexity Low_complexity 2 54 0 3 617 3574 190 23 28 chr13 4279185 4279927 -116004385 + Lx4B LINE L1 6317 7054 -4 3 617 441 307 0 55 chr13 4280268 4280413 -116003899 - B3A SINE B2 -61 137 1 3 617 423 287 90 5 chr13 4280815 4281004 -116003308 + B3 SINE B2 2 206 -10 3 617 2934 220 81 10 chr13 4281014 4281708 -116002604 + Lx5 LINE L1 6304 7046 -4 3 617 353 319 57 26 chr13 4281757 4281950 -116002362 - L1ME3B LINE L1 -318 5922 5724 3 617 509 0 16 0 chr13 4282004 4282065 -116002247 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 3 617 461 254 57 8 chr13 4282878 4283001 -116001311 + B4 SINE B4 118 246 -46 4 617 18810 131 11 16 chr13 4283040 4286700 -115997612 + L1VL4 LINE L1 667 4416 -1468 4 617 830 91 12 17 chr13 4286700 4286835 -115997477 + B1_Mus2 SINE Alu 2 147 -1 4 617 201 39 0 0 chr13 4286837 4286863 -115997449 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 617 18662 183 9 45 chr13 4286863 4287317 -115996995 + L1VL4 LINE L1 4419 4857 -1029 4 617 315 0 0 0 chr13 4287317 4287352 -115996960 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 617 18662 183 9 45 chr13 4287352 4287817 -115996495 + L1VL4 LINE L1 4858 5332 -554 4 617 389 322 60 48 chr13 4288265 4288516 -115995796 - RLTR3_Mm LTR ERVK -504 824 571 4 617 368 220 33 117 chr13 4288760 4288942 -115995370 - RLTR13D3 LTR ERVK -812 171 1 4 617 4889 121 22 0 chr13 4288942 4289678 -115994634 + L1_Mus3 LINE L1 5886 6637 -1 4 617 645 14 0 0 chr13 4289824 4289898 -115994414 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 617 23 0 0 0 chr13 4291767 4291790 -115992522 + AT_rich Low_complexity Low_complexity 1 23 0 4 617 393 22 0 0 chr13 4291879 4291925 -115992387 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 617 1230 280 35 28 chr13 4291949 4292376 -115991936 - Lx7 LINE L1 -383 7313 6884 4 617 1260 272 202 52 chr13 4292386 4293374 -115990938 + Lx6 LINE L1 4973 6128 -1568 4 617 499 192 23 46 chr13 4293546 4293677 -115990635 + RMER1B Other Other 939 1066 0 4 617 243 0 0 0 chr13 4293725 4293752 -115990560 + (TATG)n Simple_repeat Simple_repeat 1 27 0 4 617 504 86 0 0 chr13 4293752 4293821 -115990491 + (CGTG)n Simple_repeat Simple_repeat 2 71 0 4 617 198 0 0 0 chr13 4293965 4293987 -115990325 + (A)n Simple_repeat Simple_repeat 1 22 0 4 617 4045 121 9 1 chr13 4294005 4294686 -115989626 - L1_Mur1 LINE L1 -1033 4853 4168 4 617 5855 47 20 0 chr13 4294687 4295435 -115988877 + L1Md_F LINE L1 344 1106 -5413 4 617 3214 268 62 19 chr13 4295442 4296183 -115988129 + Lx6 LINE L1 6367 7142 -318 4 617 192 40 0 0 chr13 4296183 4296208 -115988104 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 617 3214 268 62 19 chr13 4296208 4296434 -115987878 + Lx6 LINE L1 7143 7375 -85 4 617 211 204 0 0 chr13 4297905 4297949 -115986363 + (CAT)n Simple_repeat Simple_repeat 3 46 0 4 617 7211 93 16 5 chr13 4298310 4299327 -115984985 - Lx3_Mus LINE L1 0 7009 5982 4 617 3799 65 22 60 chr13 4299327 4299983 -115984329 + Lx3_Mus LINE L1 5322 5961 -1048 4 617 23 33 0 0 chr13 4300318 4300348 -115983964 + AT_rich Low_complexity Low_complexity 1 30 0 4 617 2175 211 33 35 chr13 4300547 4301150 -115983162 - RLTR14-int LTR ERV1 -509 4808 4207 4 617 420 55 0 0 chr13 4301174 4301229 -115983083 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 617 12969 194 58 26 chr13 4301238 4301567 -115982745 - RLTR14-int LTR ERV1 -1189 4128 3776 4 617 3557 171 64 6 chr13 4301567 4302221 -115982091 + RLTR17 LTR ERVK 1 692 0 4 617 12969 194 58 26 chr13 4302221 4304807 -115979505 - RLTR14-int LTR ERV1 -1542 3775 1120 4 617 689 194 23 0 chr13 4304809 4304938 -115979374 + RLTR14-int LTR ERV1 2048 2179 -3138 4 617 333 177 37 37 chr13 4304940 4305022 -115979290 - RLTR14-int LTR ERV1 -4232 1085 1004 4 617 5969 134 17 12 chr13 4305814 4307858 -115976454 - L1Md_A LINE L1 -3799 2084 31 4 617 826 268 88 64 chr13 4308567 4309028 -115975284 + RMER4B LTR ERVK 69 576 -9 4 617 389 315 93 11 chr13 4309061 4309244 -115975068 - L1M2 LINE L1 -2955 3188 2991 4 617 2301 218 56 72 chr13 4309255 4310043 -115974269 - L1_Rod LINE L1 -3005 2842 2068 4 617 2718 47 0 0 chr13 4310235 4310573 -115973739 + ORR1A0 LTR MaLR 1 338 -8 4 617 13445 53 6 8 chr13 4310577 4310591 -115973721 + ORR1A0-int LTR MaLR 1 14 -1778 4 617 4274 25 0 0 chr13 4310591 4311073 -115973239 - LTRIS_Mm LTR ERV1 0 482 1 4 617 13445 53 6 8 chr13 4311073 4312853 -115971459 + ORR1A0-int LTR MaLR 15 1792 0 4 617 2704 48 33 0 chr13 4312853 4313188 -115971124 + ORR1A0 LTR MaLR 1 346 0 4 617 260 351 6 12 chr13 4313461 4313631 -115970681 + CT-rich Low_complexity Low_complexity 1 169 0 4 617 3114 208 60 61 chr13 4314158 4315014 -115969298 - RLTR13A LTR ERVK 0 855 1 4 617 202 269 176 15 chr13 4315619 4315687 -115968625 - L3 LINE CR1 -15 4474 4396 4 617 664 283 58 21 chr13 4315937 4316128 -115968184 + RLTR30 LTR ERV1 3 200 -179 4 617 693 190 11 114 chr13 4316137 4316321 -115967991 + RLTR30 LTR ERV1 176 340 -39 4 617 294 95 0 0 chr13 4316618 4316660 -115967652 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 617 2271 183 15 32 chr13 4316804 4317273 -115967039 - RMER6B LTR ERVK 0 461 1 4 617 6907 167 49 72 chr13 4317276 4318746 -115965566 - MYSERV6-int LTR ERVK -1195 7764 6297 4 617 252 171 0 0 chr13 4318746 4318787 -115965525 - B1_Mus1 SINE Alu -95 53 13 4 617 6907 167 49 72 chr13 4318787 4319074 -115965238 - MYSERV6-int LTR ERVK -1195 6296 6009 4 617 926 168 0 11 chr13 4319116 4319297 -115965015 + T-rich Low_complexity Low_complexity 2 180 0 4 617 6415 93 3 0 chr13 4319327 4320247 -115964065 - L1_Mus1 LINE L1 0 6567 5645 4 617 6184 80 5 6 chr13 4320256 4321127 -115963185 - L1Md_F2 LINE L1 0 6582 5713 4 617 3316 74 32 0 chr13 4321125 4321600 -115962712 + L1Md_F2 LINE L1 5241 5730 -153 4 617 4147 174 8 29 chr13 4321604 4322517 -115961795 - L1Md_A LINE L1 -5402 1322 446 4 77 31364 112 20 16 chr13 4322521 4328900 -115955412 - L1Md_F2 LINE L1 -12 6570 217 4 618 504 128 32 64 chr13 4328907 4329032 -115955280 - MYSERV6-int LTR ERVK -4551 4408 4288 4 618 1458 134 8 4 chr13 4329046 4329285 -115955027 - L1Md_F2 LINE L1 -22 6560 6321 4 618 10743 158 37 39 chr13 4329285 4331619 -115952693 - MYSERV6-int LTR ERVK -5544 3415 1085 4 618 491 168 99 0 chr13 4331632 4331733 -115952579 - RLTR47_MM LTR ERV1 -83 449 339 4 618 1350 148 17 13 chr13 4331732 4331965 -115952347 + RLTR9F LTR ERVK 182 415 0 4 618 5178 248 19 12 chr13 4331970 4333296 -115951016 + ETnERV-int LTR ERVK 6 1408 -1906 4 618 15295 159 14 31 chr13 4333287 4335920 -115948392 + ETnERV2-int LTR ERVK 3065 6429 -977 4 618 431 136 25 12 chr13 4336107 4336192 -115948120 + ETnERV2-int LTR ERVK 7331 7406 0 4 618 2815 114 27 5 chr13 4336192 4336598 -115947714 + RLTR9F LTR ERVK 1 415 0 4 618 308 290 57 34 chr13 4336617 4336792 -115947520 - MURVY-int LTR ERV1 -139 7313 7135 4 618 3268 11 43 0 chr13 4337710 4338062 -115946250 + IAPLTR1_Mm LTR ERVK 1 367 0 4 618 56033 24 18 6 chr13 4338062 4344458 -115939854 + IAPEz-int LTR ERVK 8 6481 0 4 618 3257 14 43 0 chr13 4344458 4344810 -115939502 + IAPLTR1_Mm LTR ERVK 1 367 0 4 618 1564 284 23 12 chr13 4344818 4345246 -115939066 - MuRRS4-int LTR ERV1 -1038 4025 3593 4 618 605 309 64 39 chr13 4345690 4346080 -115938232 - MMERGLN-int LTR ERV1 -3136 4420 4021 4 618 208 246 140 0 chr13 4346372 4346429 -115937883 - MER5A DNA MER1_type -68 121 57 4 618 293 256 12 0 chr13 4346502 4346588 -115937724 - RLTR6-int LTR ERV1 -5581 2197 2111 4 618 782 134 124 30 chr13 4346714 4346883 -115937429 - RLTR47_MM LTR ERV1 0 532 348 4 618 2827 168 99 4 chr13 4346883 4347881 -115936431 - MYSERV6-int LTR ERVK -7865 1094 2 4 618 2299 179 30 7 chr13 4347882 4348316 -115935996 - RMER6B LTR ERVK -1 460 17 4 618 302 306 8 10 chr13 4348517 4348645 -115935667 + L1M5 LINE L1 3575 3701 -2445 4 618 1976 203 18 18 chr13 4349098 4349490 -115934822 - MTB_Mm LTR MaLR -2 405 14 4 618 188 67 33 0 chr13 4349639 4349669 -115934643 + (TGGGGG)n Simple_repeat Simple_repeat 6 36 0 4 618 2704 105 5 20 chr13 4349751 4350158 -115934154 - RLTR9E LTR ERVK 0 409 9 4 618 581 246 46 48 chr13 4350166 4350305 -115934007 - L1Md_F LINE L1 -5777 842 769 4 618 225 0 0 0 chr13 4350305 4350330 -115933982 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 618 581 235 51 34 chr13 4350330 4350461 -115933851 - L1Md_F LINE L1 -5851 768 515 4 618 6199 203 55 64 chr13 4350461 4352427 -115931885 - ETnERV2-int LTR ERVK -3690 3716 1656 4 618 1141 99 0 0 chr13 4352427 4352568 -115931744 + B1_Mus1 SINE Alu 1 141 -7 4 618 432 0 0 0 chr13 4352571 4352619 -115931693 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 4 618 6199 232 73 79 chr13 4352619 4353528 -115930784 - ETnERV2-int LTR ERVK -4806 2600 2428 4 618 4081 71 34 0 chr13 4353538 4354033 -115930279 + RLTR1B LTR ERV1 1 512 0 4 618 17521 69 25 26 chr13 4354033 4356354 -115927958 + RLTR1B-int LTR ERV1 1 2317 -982 4 618 570 50 6 16 chr13 4356354 4356441 -115927871 + B1_Mur4 SINE Alu 33 150 0 4 618 228 43 21 42 chr13 4356445 4356493 -115927819 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 4 618 304 197 102 39 chr13 4356495 4356553 -115927759 - ETnERV2-int LTR ERVK -4814 592 533 4 618 270 56 0 0 chr13 4356553 4356589 -115927723 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 4 618 826 128 36 136 chr13 4356589 4356776 -115927536 - ETnERV2-int LTR ERVK -5011 2233 2093 4 618 180 163 0 0 chr13 4356809 4356852 -115927460 + T-rich Low_complexity Low_complexity 1 43 0 4 618 406 123 0 15 chr13 4357060 4357126 -115927186 - RLTR9B LTR ERVK -372 65 1 4 618 6604 83 28 6 chr13 4357126 4358078 -115926234 + MusHAL1 LINE L1 1737 2709 -3 4 618 555 289 63 70 chr13 4359551 4359832 -115924480 - B4 SINE B4 -17 275 32 4 618 608 259 124 28 chr13 4359842 4360060 -115924252 + RMER4A LTR ERVK 17 255 -211 4 618 359 41 0 20 chr13 4360080 4360130 -115924182 + (GGA)n Simple_repeat Simple_repeat 2 50 0 4 618 1102 85 0 12 chr13 4360132 4360298 -115924014 + (GAA)n Simple_repeat Simple_repeat 3 166 0 4 618 345 286 37 75 chr13 4360364 4360592 -115923720 + RMER4A LTR ERVK 329 583 -2 4 618 494 270 16 0 chr13 4361409 4361535 -115922777 + Lx9 LINE L1 7322 7449 -195 4 618 702 65 0 0 chr13 4361547 4361639 -115922673 + (TA)n Simple_repeat Simple_repeat 1 92 0 4 618 2395 182 59 20 chr13 4361770 4362258 -115922054 - RMER1B Other Other -4 1062 556 4 618 1211 186 23 0 chr13 4362261 4362481 -115921831 - RMER1B Other Other -795 271 47 4 618 22 0 0 0 chr13 4363012 4363034 -115921278 + AT_rich Low_complexity Low_complexity 1 22 0 4 618 351 0 0 0 chr13 4363291 4363330 -115920982 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 618 1201 52 0 0 chr13 4364545 4364680 -115919632 + B1_Mus1 SINE Alu 2 136 -12 4 618 328 38 18 36 chr13 4364680 4364735 -115919577 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 4 618 27 0 0 80 chr13 4364814 4364864 -115919448 + AT_rich Low_complexity Low_complexity 1 46 0 4 618 279 103 0 0 chr13 4365006 4365045 -115919267 + RMER6B LTR ERVK 1 39 -422 4 618 740 315 31 10 chr13 4365504 4365951 -115918361 - L1_Mur3 LINE L1 -3910 1967 1509 4 618 31070 116 56 18 chr13 4365928 4371147 -115913165 + L1_Mur1 LINE L1 3 5415 -471 4 618 567 0 0 0 chr13 4371147 4371210 -115913102 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 4 618 31070 91 40 6 chr13 4371210 4371649 -115912663 + L1_Mur1 LINE L1 5416 5883 -3 4 618 2857 153 26 8 chr13 4371649 4372117 -115912195 + RLTR26 LTR ERVK 1 476 -166 4 618 341 362 5 20 chr13 4372389 4372589 -115911723 + RNERVK23-int LTR ERVK 847 1043 -7174 4 618 270 0 0 0 chr13 4372864 4372894 -115911418 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 4 618 1563 258 27 0 chr13 4373021 4373389 -115910923 + RNERVK23-int LTR ERVK 4443 4820 -3397 4 618 432 51 0 0 chr13 4373389 4373448 -115910864 + (T)n Simple_repeat Simple_repeat 1 59 0 4 618 4543 237 2 8 chr13 4373448 4374390 -115909922 + RNERVK23-int LTR ERVK 4815 5750 -2467 4 618 825 249 24 36 chr13 4374389 4374639 -115909673 + RNERVK23-int LTR ERVK 5715 5961 -2256 4 618 1111 255 132 9 chr13 4374641 4374767 -115909545 + RNERVK23-int LTR ERVK 7460 7584 -633 4 618 386 84 0 27 chr13 4374767 4374840 -115909472 + (CAGAGA)n Simple_repeat Simple_repeat 4 74 0 4 618 1111 255 132 9 chr13 4374840 4375030 -115909282 + RNERVK23-int LTR ERVK 7585 7815 -402 4 618 283 247 9 93 chr13 4375175 4375282 -115909030 + ETnERV2-int LTR ERVK 6750 6847 -559 4 618 302 146 0 0 chr13 4375991 4376039 -115908273 + RLTR19-int LTR ERVK 1013 1060 -5077 4 618 1332 212 59 24 chr13 4376052 4376342 -115907970 + ETnERV2-int LTR ERVK 2454 2753 -4653 4 618 5888 171 60 110 chr13 4376377 4378304 -115906008 + RLTR45-int LTR ERVK 4122 5907 -1337 4 618 997 278 19 7 chr13 4378293 4378647 -115905665 + RLTR45-int LTR ERVK 7506 7828 -389 4 618 3790 146 10 10 chr13 4378677 4379259 -115905053 + ETnERV2-int LTR ERVK 6495 7076 -330 5 618 426 283 30 48 chr13 4379539 4379706 -115904606 + RNLTR23 LTR ERVK 479 642 0 5 618 1211 102 0 0 chr13 4379706 4379873 -115904439 - L1_Mm LINE L1 -746 5137 4971 5 618 1606 171 13 13 chr13 4379873 4380176 -115904136 - ORR1A2-int LTR MaLR -1481 482 180 5 618 416 129 0 0 chr13 4380173 4380235 -115904077 - ORR1A2-int LTR MaLR -1730 62 1 5 618 1863 148 19 7 chr13 4380239 4380546 -115903766 - ORR1A2 LTR MaLR -8 319 9 5 618 351 0 0 0 chr13 4380822 4380861 -115903451 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 618 4015 66 24 53 chr13 4381025 4381663 -115902649 + RLTR6_Mm LTR ERV1 1 619 -35 5 618 2262 143 10 76 chr13 4382152 4382239 -115902073 - RLTR14 LTR ERV1 0 382 309 5 618 1333 42 101 0 chr13 4382239 4382407 -115901905 + L1Md_F2 LINE L1 6398 6582 0 5 618 2262 143 10 76 chr13 4382407 4382728 -115901584 - RLTR14 LTR ERV1 -74 308 1 5 618 3666 60 60 2 chr13 4382749 4383198 -115901114 + MT2C_Mm LTR ERVL 1 475 0 5 618 3125 175 114 38 chr13 4383231 4383828 -115900484 - RLTR14-int LTR ERV1 -109 5208 4545 5 618 4505 27 0 0 chr13 4383828 4384310 -115900002 - LTRIS_Mm LTR ERV1 0 482 1 5 618 14458 198 55 33 chr13 4384310 4385568 -115898744 - RLTR14-int LTR ERV1 -773 4544 3183 5 618 3450 58 10 0 chr13 4385568 4385979 -115898333 + L1Md_F2 LINE L1 6168 6582 0 5 618 14458 200 57 31 chr13 4385979 4386975 -115897337 - RLTR14-int LTR ERV1 -2135 3182 2138 5 618 234 0 0 0 chr13 4386975 4387001 -115897311 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 5 618 14458 200 57 31 chr13 4387001 4387415 -115896897 - RLTR14-int LTR ERV1 -3180 2137 1730 5 618 3122 64 51 0 chr13 4387415 4387806 -115896506 + RLTR10A LTR ERVK 1 411 0 5 618 14458 200 57 31 chr13 4387806 4388420 -115895892 - RLTR14-int LTR ERV1 -3588 1729 1120 5 618 737 197 0 0 chr13 4388422 4388554 -115895758 + RLTR14-int LTR ERV1 2048 2179 -3138 5 618 28 0 0 0 chr13 4389294 4389322 -115894990 + AT_rich Low_complexity Low_complexity 1 28 0 5 618 248 146 36 0 chr13 4390650 4390705 -115893607 - L1_Rod LINE L1 -3712 2135 2079 5 618 33 25 0 0 chr13 4390706 4390746 -115893566 + AT_rich Low_complexity Low_complexity 1 40 0 5 618 252 86 0 0 chr13 4390901 4390936 -115893376 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 618 273 128 0 0 chr13 4391197 4391244 -115893068 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 5 618 239 305 19 19 chr13 4391285 4391392 -115892920 + (TCTG)n Simple_repeat Simple_repeat 2 108 0 5 618 441 0 0 0 chr13 4391403 4391452 -115892860 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 618 1613 140 60 60 chr13 4391788 4392123 -115892189 - Lx LINE L1 -2 6652 6318 5 618 206 103 0 49 chr13 4392132 4392173 -115892139 + T-rich Low_complexity Low_complexity 3 41 0 5 618 996 129 0 0 chr13 4392908 4393048 -115891264 + B1_Mus1 SINE Alu 1 140 -8 5 618 3969 88 0 9 chr13 4393125 4393673 -115890639 - L1Md_F2 LINE L1 -1 6581 6039 5 618 2089 57 50 3 chr13 4393673 4393965 -115890347 + L1Md_F2 LINE L1 5707 6013 -569 5 618 719 253 21 16 chr13 4394519 4394708 -115889604 + RLTR30 LTR ERV1 181 370 -9 5 618 327 164 40 40 chr13 4395117 4395193 -115889119 - RMER6B LTR ERVK 0 461 386 5 618 3526 179 5 16 chr13 4395193 4395939 -115888373 + L1_Mur2 LINE L1 4637 5374 -503 5 618 1065 189 178 42 chr13 4395944 4396304 -115888008 + RLTR9E LTR ERVK 1 409 0 5 618 251 236 26 86 chr13 4396429 4396545 -115887767 + MMETn-int LTR ERVK 209 317 -2997 5 618 294 73 0 0 chr13 4396600 4396641 -115887671 + RLTR45-int LTR ERVK 2091 2131 -5113 5 618 1660 181 55 15 chr13 4397106 4397504 -115886808 + MMETn-int LTR ERVK 719 1132 -3712 5 618 550 283 6 39 chr13 4397544 4397724 -115886588 + MMETn-int LTR ERVK 2435 2608 -4798 5 618 1544 142 102 31 chr13 4397724 4398161 -115886151 + MMETn-int LTR ERVK 3055 3441 -3965 5 618 4905 207 53 69 chr13 4398404 4401473 -115882839 + MMETn-int LTR ERVK 2356 4465 -379 5 618 759 216 166 2 chr13 4401477 4401738 -115882574 + RLTR13D6 LTR ERVK 118 415 -487 5 618 245 203 129 14 chr13 4401756 4401826 -115882486 + RLTR13D6 LTR ERVK 460 537 -365 5 618 486 41 26 64 chr13 4401826 4401904 -115882408 + MMETn-int LTR ERVK 7329 7403 -3 5 618 1077 159 243 44 chr13 4401906 4402247 -115882065 + RLTR9E LTR ERVK 1 409 0 5 618 6217 130 37 0 chr13 4402247 4403467 -115880845 + Lx LINE L1 5381 6647 -7 5 618 2123 169 15 42 chr13 4403570 4403972 -115880340 - RMER6B LTR ERVK -70 391 1 5 618 2491 160 19 6 chr13 4403979 4404458 -115879854 - MYSERV6-int LTR ERVK -1199 7760 7276 5 618 316 182 91 0 chr13 4404458 4404524 -115879788 - RLTR19 LTR ERVK -96 619 548 5 618 1560 191 78 18 chr13 4404499 4404834 -115879478 - RLTR19 LTR ERVK -144 355 1 5 618 3235 184 88 110 chr13 4404842 4405319 -115878993 - MYSERV6-int LTR ERVK -3502 5457 4984 5 618 282 229 180 0 chr13 4405319 4405380 -115878932 - B1_Mur4 SINE Alu -78 72 1 5 618 3235 184 88 110 chr13 4405380 4405660 -115878652 - MYSERV6-int LTR ERVK -3502 4983 4704 5 618 986 70 78 0 chr13 4405660 4405789 -115878523 - B1_Mus1 SINE Alu -9 139 1 5 618 3235 184 88 110 chr13 4405789 4406056 -115878256 - MYSERV6-int LTR ERVK -4256 4703 4397 5 618 2363 277 76 19 chr13 4406073 4406956 -115877356 + Lx7 LINE L1 6376 7308 -388 5 618 235 163 21 21 chr13 4406958 4407052 -115877260 + (TCTCTG)n Simple_repeat Simple_repeat 3 96 0 5 618 468 0 0 0 chr13 4407124 4407176 -115877136 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 618 232 344 65 35 chr13 4407272 4407471 -115876841 - Lx8 LINE L1 -237 7236 7032 5 618 1004 304 40 59 chr13 4407475 4407974 -115876338 - L1_Mur3 LINE L1 -365 5515 5009 5 618 5236 54 0 1 chr13 4407974 4408620 -115875692 - L1Md_F2 LINE L1 -13 6569 5925 5 618 1004 304 40 59 chr13 4408620 4408798 -115875514 - L1_Mur3 LINE L1 -872 5008 4851 5 618 456 291 53 34 chr13 4408842 4409162 -115875150 - L1M2 LINE L1 -1413 4730 4405 5 618 626 113 9 0 chr13 4409185 4409300 -115875012 + (TC)n Simple_repeat Simple_repeat 1 116 0 5 618 6017 108 44 12 chr13 4409336 4410334 -115873978 - L1Md_F2 LINE L1 0 6582 5548 5 618 11522 155 42 23 chr13 4410338 4411653 -115872659 - MYSERV6-int LTR ERVK -6558 2401 1122 5 618 1793 121 25 7 chr13 4411653 4411936 -115872376 + L1_Mus4 LINE L1 6343 6630 -6 5 618 11522 155 42 23 chr13 4411936 4412401 -115871911 - MYSERV6-int LTR ERVK -7838 1121 628 5 618 2903 88 8 8 chr13 4412401 4412801 -115871511 + MTB LTR MaLR 1 400 0 5 618 11522 155 42 23 chr13 4412801 4413373 -115870939 - MYSERV6-int LTR ERVK -8332 627 2 5 618 2421 176 25 0 chr13 4413376 4413807 -115870505 - RMER6B LTR ERVK -5 456 15 5 618 1758 231 14 43 chr13 4414662 4414768 -115869544 - MTB_Mm LTR MaLR -2 405 308 5 618 2020 155 19 38 chr13 4414768 4414919 -115869393 + RLTR9E LTR ERVK 1 151 -258 5 618 306 0 0 0 chr13 4414919 4414953 -115869359 + (C)n Simple_repeat Simple_repeat 1 34 0 5 618 2020 155 19 38 chr13 4414953 4415218 -115869094 + RLTR9E LTR ERVK 152 409 0 5 618 1758 231 14 43 chr13 4415218 4415528 -115868784 - MTB_Mm LTR MaLR -100 307 1 5 618 404 341 59 56 chr13 4415540 4415844 -115868468 + L1M4 LINE L1 3732 4036 -2110 5 618 429 237 121 60 chr13 4415937 4416103 -115868209 - RLTR14 LTR ERV1 0 382 207 5 618 491 331 25 46 chr13 4416800 4417044 -115867268 + ORR1D2 LTR MaLR 1 247 -112 5 618 360 252 157 16 chr13 4417028 4417149 -115867163 + ORR1D2 LTR MaLR 172 309 -50 5 618 23539 84 89 16 chr13 4417581 4418934 -115865378 - L1Md_F2 LINE L1 -16 6566 5235 5 618 486 0 0 0 chr13 4418934 4418988 -115865324 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 618 23539 85 157 15 chr13 4418988 4422952 -115861360 - L1Md_F2 LINE L1 -649 5234 595 5 618 1858 209 150 20 chr13 4423076 4423575 -115860737 - RLTR12A LTR ERVK -4 564 1 5 618 3548 100 6 2 chr13 4423829 4424329 -115859983 + L1_Mus3 LINE L1 6131 6632 -6 5 618 5846 130 36 5 chr13 4424335 4425522 -115858790 - Lx LINE L1 0 6654 5419 5 618 282 73 0 0 chr13 4425516 4425557 -115858755 + Lx LINE L1 5381 5421 -462 5 618 1552 102 0 19 chr13 4425554 4425815 -115858497 - MusHAL1 LINE L1 -505 2207 1952 5 618 2616 31 2 239 chr13 4426787 4427298 -115857014 - RLTR10 LTR ERVK 0 390 1 5 618 283 240 15 44 chr13 4427442 4427465 -115856847 + Lx8 LINE L1 7333 7356 -117 5 618 3923 143 21 12 chr13 4427465 4428142 -115856170 + Lx4B LINE L1 6372 7054 -4 5 618 283 240 15 44 chr13 4428142 4428253 -115856059 + Lx8 LINE L1 7357 7463 -10 5 618 3448 23 0 0 chr13 4428730 4429158 -115855154 - L1_Mm LINE L1 -453 5430 5003 5 618 1761 79 4 12 chr13 4429158 4429401 -115854911 + L1Md_T LINE L1 6342 6582 0 5 618 1037 216 59 0 chr13 4429575 4429779 -115854533 - URR1B DNA MER1_type -9 216 1 5 618 1815 241 86 2 chr13 4429783 4430344 -115853968 - Lx9 LINE L1 -60 7584 6977 5 618 1964 292 71 19 chr13 4430421 4431234 -115853078 + Lx7 LINE L1 6425 7280 -416 5 618 240 154 0 0 chr13 4431260 4431312 -115853000 + CT-rich Low_complexity Low_complexity 1 52 0 5 618 390 91 0 0 chr13 4431312 4431367 -115852945 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 618 186 43 0 0 chr13 4431430 4431453 -115852859 + (GA)n Simple_repeat Simple_repeat 2 24 0 5 618 34 42 0 0 chr13 4431489 4431537 -115852775 + AT_rich Low_complexity Low_complexity 1 48 0 5 618 301 254 0 0 chr13 4431751 4431818 -115852494 + Lx9 LINE L1 7166 7232 -412 5 618 439 190 69 0 chr13 4431822 4431938 -115852374 - L1_Mur3 LINE L1 -1411 4469 4346 5 618 284 364 0 0 chr13 4431938 4432015 -115852297 + PB1D7 SINE Alu 42 118 -2 5 618 270 333 26 0 chr13 4433119 4433197 -115851115 - ID4 SINE ID 0 83 4 5 618 834 259 19 0 chr13 4433235 4433447 -115850865 + B3 SINE B2 1 216 0 5 618 1791 226 50 20 chr13 4434079 4434480 -115849832 + MTC LTR MaLR 1 413 -8 5 618 954 227 61 56 chr13 4436408 4436924 -115847388 - BGLII_B LTR ERVK -200 492 1 5 618 668 298 49 0 chr13 4438108 4438313 -115845999 - B3 SINE B2 0 216 2 5 618 1035 100 19 0 chr13 4438439 4438599 -115845713 + L1Md_F2 LINE L1 6416 6578 -4 5 618 626 253 62 57 chr13 4438621 4438784 -115845528 + B3A SINE B2 5 169 -29 5 618 384 111 0 0 chr13 4438784 4438847 -115845465 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 618 626 253 62 57 chr13 4438847 4438876 -115845436 + B3A SINE B2 170 198 0 5 618 30384 73 23 6 chr13 4438915 4442187 -115842125 + L1Md_F2 LINE L1 371 3743 -2140 5 618 2495 111 116 16 chr13 4442187 4442619 -115841693 - IAPLTR2_Mm LTR ERVK 0 475 1 5 618 13207 61 5 1 chr13 4442664 4444457 -115839855 + L1Md_F2 LINE L1 3785 5585 -298 5 618 8251 35 1 15 chr13 4444458 4445466 -115838846 + L1Md_F2 LINE L1 5587 6580 -2 5 618 732 234 18 44 chr13 4445995 4446203 -115838109 - B3 SINE B2 0 195 2 5 618 806 243 33 37 chr13 4446931 4447230 -115837082 - Lx9 LINE L1 -35 7609 7312 5 618 598 281 86 0 chr13 4447703 4447842 -115836470 + RSINE1 SINE B4 10 160 -5 5 618 343 296 34 27 chr13 4447962 4448108 -115836204 - B1F SINE Alu -1 148 2 5 618 605 49 0 12 chr13 4449525 4449607 -115834705 + (TTCC)n Simple_repeat Simple_repeat 4 84 0 5 618 1219 79 6 6 chr13 4449610 4449788 -115834524 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 5 618 285 29 0 0 chr13 4450230 4450264 -115834048 + (CAT)n Simple_repeat Simple_repeat 2 35 0 5 618 487 101 0 0 chr13 4450701 4450770 -115833542 - BC1_Mm scRNA scRNA -83 69 1 5 618 673 288 74 4 chr13 4450877 4451135 -115833177 - Lx7 LINE L1 -663 7033 6758 5 618 515 317 72 22 chr13 4451132 4451409 -115832903 + Lx7 LINE L1 7039 7329 -367 5 618 218 82 14 116 chr13 4451409 4451478 -115832834 + T-rich Low_complexity Low_complexity 6 67 0 5 618 32 67 0 0 chr13 4451538 4451598 -115832714 + AT_rich Low_complexity Low_complexity 1 60 0 5 618 507 112 0 0 chr13 4451786 4451866 -115832446 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 618 4080 153 18 29 chr13 4451868 4452593 -115831719 - Lx2B LINE L1 0 7000 6284 5 618 4800 173 19 1 chr13 4452593 4453540 -115830772 - L1_Mur2 LINE L1 -622 5255 4292 6 618 2524 252 80 7 chr13 4453819 4454635 -115829677 - Lx2B LINE L1 -5 6995 6121 6 618 280 127 48 0 chr13 4455395 4455458 -115828854 + (TATATG)n Simple_repeat Simple_repeat 2 67 0 6 618 451 335 100 59 chr13 4455695 4455965 -115828347 - B4 SINE B4 -10 282 2 6 619 33 25 0 0 chr13 4457229 4457269 -115827043 + AT_rich Low_complexity Low_complexity 1 40 0 6 619 7778 161 8 7 chr13 4457278 4458953 -115825359 - Lx4A LINE L1 -1 7057 5375 6 619 2504 127 38 48 chr13 4458953 4459433 -115824879 - IAPLTR2_Mm LTR ERVK 0 475 1 6 619 25050 15 4 0 chr13 4459433 4462379 -115821933 - IAPEz-int LTR ERVK 0 6481 3525 6 619 869 81 24 0 chr13 4462379 4462502 -115821810 - IAPEz-int LTR ERVK -2770 4910 4785 6 619 1716 119 4 4 chr13 4462499 4462761 -115821551 - IAPEz-int LTR ERVK -5183 2497 2236 6 619 416 57 0 0 chr13 4462760 4462813 -115821499 - IAPEz-int LTR ERVK -5070 1411 1359 6 619 4816 41 32 4 chr13 4462813 4463462 -115820850 - IAPEz-int LTR ERVK -5819 662 3 6 619 2504 127 38 48 chr13 4463464 4463944 -115820368 - IAPLTR2_Mm LTR ERVK 0 475 1 6 619 535 179 9 0 chr13 4463945 4464057 -115820255 - Lx4A LINE L1 -498 5379 5267 6 619 337 329 78 13 chr13 4464233 4464387 -115819925 + L1MCb LINE L1 244 407 -6344 6 619 447 331 144 48 chr13 4464667 4464805 -115819507 + L1MCb LINE L1 642 788 -5257 6 619 2158 155 19 31 chr13 4464805 4465219 -115819093 - RLTR9E LTR ERVK 0 409 1 6 619 447 331 144 48 chr13 4465219 4465559 -115818753 + L1MCb LINE L1 789 1166 -4879 6 619 520 354 111 21 chr13 4466262 4466686 -115817626 - MER68 LTR ERVL -38 525 64 6 619 637 366 47 66 chr13 4467621 4468030 -115816282 + MTD LTR MaLR 5 405 -14 6 619 522 57 0 0 chr13 4468934 4469004 -115815308 + (TC)n Simple_repeat Simple_repeat 2 71 0 6 619 2989 78 10 0 chr13 4469248 4469648 -115814664 - L1_Mus1 LINE L1 -2 6565 6162 6 619 4221 66 0 2 chr13 4469648 4470393 -115813919 + L1_Mus1 LINE L1 5388 6131 -436 6 619 6494 152 89 7 chr13 4470388 4471629 -115812683 - Lx2 LINE L1 -20 6977 5635 6 619 15503 55 3 1 chr13 4471634 4474399 -115809913 - L1Md_F2 LINE L1 0 6582 3812 6 619 2104 176 5 0 chr13 4474398 4474811 -115809501 - Lx5 LINE L1 -1415 5635 5224 6 619 5814 150 1 2 chr13 4474809 4475786 -115808526 + Lx LINE L1 5677 6652 -2 6 619 13714 176 27 5 chr13 4475776 4479294 -115805018 + Lx LINE L1 3049 6652 -2 6 619 30 27 0 0 chr13 4479296 4479333 -115804979 + AT_rich Low_complexity Low_complexity 1 37 0 6 619 30271 78 5 3 chr13 4479357 4484524 -115799788 + L1Md_F2 LINE L1 409 5586 -297 6 619 8081 47 1 0 chr13 4484524 4485504 -115798808 + L1Md_F2 LINE L1 5587 6567 -15 6 619 30 0 0 0 chr13 4485504 4485534 -115798778 + AT_rich Low_complexity Low_complexity 1 30 0 6 619 959 57 7 14 chr13 4485855 4485997 -115798315 + L1Md_T LINE L1 6442 6582 0 6 619 30 27 0 0 chr13 4486002 4486039 -115798273 + AT_rich Low_complexity Low_complexity 1 37 0 6 619 1105 108 0 7 chr13 4487458 4487607 -115796705 - B1_Mus1 SINE Alu 0 148 1 6 619 30 0 0 0 chr13 4487610 4487640 -115796672 + AT_rich Low_complexity Low_complexity 1 30 0 6 619 334 100 33 0 chr13 4487737 4487797 -115796515 + (TA)n Simple_repeat Simple_repeat 1 62 0 6 619 2587 255 67 11 chr13 4488578 4489402 -115794910 + Lx2B LINE L1 6121 6990 -10 6 619 2381 143 46 0 chr13 4489680 4490112 -115794200 + L1_Mur2 LINE L1 4288 4739 -1138 6 619 13194 160 38 12 chr13 4490139 4490948 -115793364 + L1VL4 LINE L1 609 1437 -2477 6 619 279 0 0 0 chr13 4490948 4490979 -115793333 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 619 13194 129 42 14 chr13 4490979 4493321 -115790991 + L1VL4 LINE L1 1438 3951 -2192 6 619 1809 246 76 38 chr13 4493340 4494211 -115790101 + L1_Mus1 LINE L1 220 1123 -5493 6 619 534 52 49 73 chr13 4494212 4494315 -115789997 + B1_Mm SINE Alu 1 147 0 6 619 647 84 0 10 chr13 4494323 4494419 -115789893 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 6 619 525 138 4 1 chr13 4494421 4494550 -115789762 + L1_Mus1 LINE L1 1086 1209 -5877 6 619 27992 114 15 7 chr13 4494546 4499529 -115784783 + L1_Mus1 LINE L1 1109 6142 -425 6 619 3266 57 55 0 chr13 4499530 4500000 -115784312 - RLTR10-int LTR ERVK -1361 626 58 6 619 275 91 0 43 chr13 4500025 4500071 -115784241 - RLTR10C LTR ERVK -48 388 345 1 619 605 82 35 0 chr13 4500071 4500156 -115784156 + RLTR10 LTR ERVK 4 91 -299 2 619 6548 111 11 11 chr13 4500156 4501133 -115783179 + L1_Mus4 LINE L1 5654 6630 -6 3 619 7785 175 20 13 chr13 4501127 4503373 -115780939 + Lx2B LINE L1 4725 6997 -3 4 619 230 200 0 48 chr13 4503672 4503735 -115780577 + A-rich Low_complexity Low_complexity 2 61 0 5 619 420 332 82 27 chr13 4503748 4504005 -115780307 - Lx7 LINE L1 -387 7309 7039 6 619 1023 271 15 4 chr13 4504001 4504275 -115780037 + Lx7 LINE L1 6757 7033 -663 6 619 207 0 0 0 chr13 4504780 4504803 -115779509 + (ATTG)n Simple_repeat Simple_repeat 4 26 0 7 619 501 71 0 0 chr13 4505257 4505327 -115778985 + (GA)n Simple_repeat Simple_repeat 2 71 0 8 619 2313 176 48 35 chr13 4506192 4506707 -115777605 - RLTR31A_Mm LTR ERVK -3 558 1 9 619 23 78 0 0 chr13 4507551 4507602 -115776710 + AT_rich Low_complexity Low_complexity 1 51 0 1 619 507 284 22 7 chr13 4507644 4507779 -115776533 + B1F SINE Alu 2 138 -11 1 619 370 264 232 0 chr13 4507903 4508028 -115776284 - RSINE1 SINE B4 0 165 12 1 619 844 259 28 35 chr13 4508513 4508801 -115775511 + Lx9 LINE L1 7312 7597 -47 1 619 596 203 85 0 chr13 4509527 4509645 -115774667 + B3 SINE B2 3 130 -86 1 619 2973 76 0 8 chr13 4509958 4510356 -115773956 - L1Md_F2 LINE L1 -12 6570 6176 1 619 180 0 0 0 chr13 4510870 4510890 -115773422 + (A)n Simple_repeat Simple_repeat 1 20 0 1 619 208 159 0 22 chr13 4510964 4511009 -115773303 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1 619 242 95 24 0 chr13 4511012 4511054 -115773258 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 619 654 291 0 32 chr13 4511054 4511239 -115773073 - B3A SINE B2 -16 182 4 1 619 579 301 85 0 chr13 4511380 4511579 -115772733 + B3 SINE B2 1 216 0 2 619 3815 62 4 2 chr13 4512282 4512765 -115771547 - L1_Mus1 LINE L1 -1 6566 6083 2 619 727 182 0 0 chr13 4512967 4513110 -115771202 - Lx2A1 LINE L1 -7 7001 6859 2 619 302 208 0 0 chr13 4513113 4513166 -115771146 + Lx2A1 LINE L1 6614 6666 -342 2 619 225 309 36 30 chr13 4514283 4514450 -115769862 + L1Md_F LINE L1 570 737 -5782 2 619 9277 131 17 7 chr13 4514518 4516813 -115767499 + L1_Mus3 LINE L1 4322 6638 0 2 619 6716 164 7 12 chr13 4516824 4518012 -115766300 + Lx3B LINE L1 5786 6967 -6 2 619 182 136 23 0 chr13 4518020 4518064 -115766248 + A-rich Low_complexity Low_complexity 2 46 0 2 619 14494 138 24 19 chr13 4518241 4521498 -115762814 + L1VL2 LINE L1 611 3912 -2231 2 619 1520 246 72 52 chr13 4521498 4521901 -115762411 - MTC LTR MaLR -10 411 1 2 619 264 30 0 0 chr13 4521903 4521936 -115762376 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 619 411 21 0 0 chr13 4522015 4522063 -115762249 + (TTCC)n Simple_repeat Simple_repeat 1 48 0 3 619 1096 91 17 0 chr13 4522063 4522238 -115762074 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 3 619 666 266 62 29 chr13 4522747 4522956 -115761356 - B3 SINE B2 0 216 1 3 619 807 277 14 0 chr13 4524715 4524928 -115759384 + B3 SINE B2 1 216 0 3 619 1148 91 0 28 chr13 4525128 4525308 -115759004 - L1Md_F2 LINE L1 -12 6570 6396 3 619 596 181 0 5 chr13 4525741 4525853 -115758459 + MTC LTR MaLR 1 107 -289 3 619 22 35 0 0 chr13 4525856 4525885 -115758427 + AT_rich Low_complexity Low_complexity 1 29 0 3 619 2913 156 12 8 chr13 4526730 4527233 -115757079 - Lx LINE L1 -91 6563 6059 3 619 6463 129 25 25 chr13 4527230 4529175 -115755137 - L1VL4 LINE L1 -1574 1985 47 3 619 334 333 70 45 chr13 4529180 4529337 -115754975 - MTD LTR MaLR -251 168 8 4 619 361 344 79 40 chr13 4529704 4530007 -115754305 + MER68 LTR ERVL 211 525 -38 4 619 14069 174 12 7 chr13 4530674 4533377 -115750935 - Lx3_Mus LINE L1 -873 6136 3425 4 619 4852 144 81 48 chr13 4533377 4534304 -115750008 - RMER17B LTR ERVK 0 958 1 4 619 14069 188 9 5 chr13 4534304 4534651 -115749661 - Lx3_Mus LINE L1 -2462 3424 3075 4 619 2077 202 30 4 chr13 4534652 4535120 -115749192 + L1_Mm LINE L1 4918 5397 -486 4 619 832 252 71 5 chr13 4535419 4535630 -115748682 - URR1B DNA MER1_type 0 225 1 4 619 300 250 20 0 chr13 4535630 4535730 -115748582 - Lx9 LINE L1 -56 7588 7487 4 619 1562 244 39 10 chr13 4535776 4536186 -115748126 - Lx9 LINE L1 -247 7397 6976 4 619 929 296 111 22 chr13 4536220 4536590 -115747722 + Lx7 LINE L1 6376 6778 -918 4 619 20028 150 17 11 chr13 4536586 4540902 -115743410 + L1VL2 LINE L1 348 4689 -1194 4 619 291 287 50 27 chr13 4540921 4541143 -115743169 - L1M2 LINE L1 -1443 4700 4474 4 619 2124 64 0 21 chr13 4541160 4541447 -115742865 - L1_Mus1 LINE L1 -7 6560 6280 5 619 1508 58 5 0 chr13 4541447 4541636 -115742676 + L1_Mus1 LINE L1 6093 6282 -285 5 619 2886 63 0 23 chr13 4541646 4542034 -115742278 - L1Md_F2 LINE L1 0 6582 6204 5 619 315 26 0 0 chr13 4542034 4542072 -115742240 + L1Md_T LINE L1 6109 6146 -436 5 619 470 252 74 65 chr13 4542087 4542151 -115742161 - L1_Rod LINE L1 -1418 4429 4366 5 619 1218 52 0 0 chr13 4542151 4542305 -115742007 + (TC)n Simple_repeat Simple_repeat 2 155 0 5 619 279 0 0 0 chr13 4542305 4542335 -115741977 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 619 470 252 74 65 chr13 4542335 4542485 -115741827 - L1_Rod LINE L1 -1482 4365 4213 5 619 390 252 19 10 chr13 4542495 4542599 -115741713 + Lx9 LINE L1 5792 5896 -1748 5 619 763 326 90 40 chr13 4542881 4543357 -115740955 + Lx8 LINE L1 6022 6521 -952 5 619 350 295 0 0 chr13 4543375 4543470 -115740842 + Lx8 LINE L1 6720 6814 -659 5 619 496 132 60 26 chr13 4543450 4543567 -115740745 - L1_Mur3 LINE L1 -1370 4510 4390 5 619 3868 169 51 2 chr13 4543554 4544546 -115739766 - Lx4A LINE L1 -758 6300 5264 5 619 26 50 0 0 chr13 4544740 4544780 -115739532 + AT_rich Low_complexity Low_complexity 1 40 0 6 619 6668 126 33 16 chr13 4545319 4546739 -115737573 - L1_Mus4 LINE L1 -7 6629 5187 6 619 1167 63 0 0 chr13 4546739 4546882 -115737430 + B1_Mm SINE Alu 5 147 0 6 619 5642 165 18 21 chr13 4546882 4547249 -115737063 - L1_Mus4 LINE L1 -697 5186 4823 6 619 384 277 12 29 chr13 4548625 4548796 -115735516 + (TTAGGG)n Simple_repeat Simple_repeat 4 171 0 6 619 675 126 0 192 chr13 4549177 4549344 -115734968 + B1_Mus1 SINE Alu 2 136 -12 6 619 207 0 0 0 chr13 4549345 4549368 -115734944 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 619 299 278 30 64 chr13 4549853 4550005 -115734307 + MTD LTR MaLR 223 419 0 6 619 627 328 114 42 chr13 4550763 4551193 -115733119 - MT2A LTR ERVL -72 461 1 6 619 337 360 87 32 chr13 4551231 4551449 -115732863 - MLT-int LTR MaLR -17 1718 1489 6 619 329 304 40 20 chr13 4551521 4551669 -115732643 - Lx6 LINE L1 -27 7433 7283 6 619 2012 186 80 94 chr13 4551670 4552211 -115732101 + RMER16 LTR ERVK 1 533 0 7 619 27 49 0 0 chr13 4552644 4552685 -115731627 + AT_rich Low_complexity Low_complexity 1 41 0 7 619 24 32 0 0 chr13 4552752 4552783 -115731529 + AT_rich Low_complexity Low_complexity 1 31 0 7 619 824 276 31 4 chr13 4552783 4553041 -115731271 - Lx9 LINE L1 -153 7491 7227 7 619 3182 199 43 80 chr13 4555282 4556116 -115728196 - RLTR40 LTR ERVK -14 803 1 7 619 618 259 15 0 chr13 4556237 4556372 -115727940 + B1_Mur2 SINE Alu 2 138 -11 7 619 240 294 0 0 chr13 4556582 4556650 -115727662 + L1M3de LINE L1 2057 2124 -4529 7 619 258 32 0 0 chr13 4557192 4557223 -115727089 + (GA)n Simple_repeat Simple_repeat 2 32 0 7 619 529 344 45 0 chr13 4557525 4557679 -115726633 + RSINE1 SINE B4 3 163 -2 7 619 247 340 84 19 chr13 4557799 4558228 -115726084 + L1M3de LINE L1 3153 3609 -3120 7 619 304 343 48 10 chr13 4558234 4558443 -115725869 + Lx8 LINE L1 7184 7400 -73 7 619 1552 254 59 23 chr13 4558514 4559015 -115725297 + RLTR11A LTR ERVK 1 520 -8 8 619 23 0 0 0 chr13 4559050 4559073 -115725239 + AT_rich Low_complexity Low_complexity 1 23 0 8 619 440 300 87 55 chr13 4559088 4559398 -115724914 + L1M4 LINE L1 3011 3330 -2816 8 619 272 312 35 9 chr13 4559581 4559694 -115724618 + L1_Mur2 LINE L1 3512 3627 -2250 8 619 352 349 12 0 chr13 4559691 4559834 -115724478 - RMER1B Other Other -782 284 172 8 619 1534 152 209 16 chr13 4559842 4560163 -115724149 + RLTR9A2 LTR ERVK 1 383 0 8 619 13967 154 42 52 chr13 4560542 4562395 -115721917 + ETnERV2-int LTR ERVK 1053 2851 -4555 8 619 3090 69 37 108 chr13 4562395 4562914 -115721398 + RLTR45 LTR ERVK 1 482 0 8 619 13967 154 42 52 chr13 4562914 4563975 -115720337 + ETnERV2-int LTR ERVK 2852 3919 -3487 8 619 345 47 0 0 chr13 4563975 4564018 -115720294 + (TA)n Simple_repeat Simple_repeat 2 44 0 8 619 351 0 0 0 chr13 4564018 4564056 -115720256 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 619 13967 154 77 37 chr13 4564056 4565305 -115719007 + ETnERV2-int LTR ERVK 2863 4171 -1235 8 619 402 281 54 96 chr13 4565319 4565654 -115718658 + ETnERV2-int LTR ERVK 6101 6421 -985 8 619 330 178 40 27 chr13 4565873 4565948 -115718364 + ETnERV2-int LTR ERVK 7331 7406 0 8 619 1287 158 0 55 chr13 4565948 4566166 -115718146 + RLTR9A2 LTR ERVK 1 214 -169 8 619 4309 59 2 41 chr13 4566166 4566749 -115717563 + LTRIS2 LTR ERV1 5 564 0 9 619 1287 158 0 55 chr13 4566749 4566784 -115717528 + RLTR9A2 LTR ERVK 215 240 -143 8 619 961 124 66 17 chr13 4567357 4567538 -115716774 + RMER16-int LTR ERVK 141 330 -5076 9 619 4090 148 38 16 chr13 4567520 4568280 -115716032 + RMER16-int LTR ERVK 668 1444 -3962 9 619 4435 188 92 53 chr13 4568271 4571064 -115713248 + RLTR1B-int LTR ERV1 760 4271 -792 9 619 856 206 51 0 chr13 4571063 4571277 -115713035 + RLTR1B-int LTR ERV1 4791 5015 -48 9 619 4393 58 2 33 chr13 4571286 4571862 -115712450 + LTRIS2 LTR ERV1 5 562 -2 9 619 747 185 31 19 chr13 4571862 4572013 -115712299 + RLTR9A2 LTR ERVK 230 382 -1 8 619 751 294 25 14 chr13 4572030 4572310 -115712002 - RMER1C Other Other -532 810 528 9 619 352 195 22 82 chr13 4572784 4572918 -115711394 + Lx7 LINE L1 7419 7544 -152 9 619 406 127 55 8 chr13 4572919 4573046 -115711266 + (TA)n Simple_repeat Simple_repeat 1 133 0 9 619 562 197 72 7 chr13 4573050 4573188 -115711124 + Lx7 LINE L1 7550 7696 0 9 619 731 252 54 108 chr13 4575691 4576043 -115708269 + Lx9 LINE L1 7085 7417 -227 9 619 216 0 0 0 chr13 4576845 4576869 -115707443 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 9 619 1039 95 0 33 chr13 4576883 4577035 -115707277 - B1_Mus2 SINE Alu 0 147 1 9 619 6525 133 19 10 chr13 4577775 4578838 -115705474 + ORR1A2-int LTR MaLR 892 1963 0 1 619 2137 103 18 15 chr13 4578838 4579164 -115705148 + ORR1A2 LTR MaLR 1 327 0 1 619 2162 199 58 19 chr13 4579703 4580189 -115704123 + RLTR16 LTR ERVK 1 505 0 1 619 36 0 0 0 chr13 4580874 4580910 -115703402 + AT_rich Low_complexity Low_complexity 1 36 0 1 619 452 268 35 5 chr13 4580910 4581127 -115703185 - Lx4B LINE L1 -17 7041 6729 1 619 757 125 79 24 chr13 4581134 4581298 -115703014 + L1_Mus3 LINE L1 6465 6637 -1 1 619 5757 155 23 77 chr13 4581298 4582644 -115701668 + L1_Mur2 LINE L1 3804 5077 -800 1 619 522 330 35 30 chr13 4583818 4584021 -115700291 + B4 SINE B4 84 287 -5 1 619 23 33 0 0 chr13 4584245 4584275 -115700037 + AT_rich Low_complexity Low_complexity 1 30 0 1 619 1202 191 9 141 chr13 4584302 4584643 -115699669 - Lx6 LINE L1 -4 7456 7161 1 619 400 298 83 28 chr13 4584812 4584957 -115699355 - RSINE1 SINE B4 -5 160 8 1 619 25 0 0 0 chr13 4585044 4585069 -115699243 + AT_rich Low_complexity Low_complexity 1 25 0 1 619 946 196 27 46 chr13 4585069 4585288 -115699024 - B3 SINE B2 -1 215 1 1 619 21 0 0 0 chr13 4585295 4585316 -115698996 + AT_rich Low_complexity Low_complexity 1 21 0 1 619 183 196 0 61 chr13 4585410 4585459 -115698853 + L3 LINE CR1 965 1010 -3479 1 619 1219 291 78 11 chr13 4586194 4586960 -115697352 - Lx5 LINE L1 -7 7453 6454 1 77 3632 255 45 4 chr13 4586975 4587895 -115696417 - Lx5 LINE L1 -79 6971 6015 1 620 1665 199 4 48 chr13 4587899 4588353 -115695959 + L1_Mur2 LINE L1 4875 5308 -569 1 620 862 218 71 5 chr13 4588355 4588553 -115695759 - Lx5 LINE L1 -205 6845 6635 1 620 374 253 24 61 chr13 4588551 4588715 -115695597 + Lx4B LINE L1 6897 7054 -4 1 620 561 211 0 8 chr13 4588708 4588838 -115695474 + L1_Mm LINE L1 5360 5492 -867 1 620 506 216 0 67 chr13 4588837 4588986 -115695326 - L1_Mur3 LINE L1 -3036 2844 2706 1 620 570 253 94 58 chr13 4588986 4589327 -115694985 + MT2B LTR ERVL 1 354 -121 1 620 1278 226 64 20 chr13 4589316 4589736 -115694576 + RMER19B LTR ERVK 107 570 -332 1 620 530 218 105 0 chr13 4589732 4589856 -115694456 - RMER19B LTR ERVK -765 137 1 1 620 416 263 22 181 chr13 4589869 4590106 -115694206 - MTE2a LTR MaLR -186 214 6 1 620 251 331 34 84 chr13 4590336 4590514 -115693798 + MIR SINE MIR 87 255 -7 1 620 199 333 63 0 chr13 4590648 4590711 -115693601 - MIRb SINE MIR -186 82 16 1 620 263 300 8 76 chr13 4590750 4590869 -115693443 - L2b LINE L2 -11 3364 3254 1 620 2906 107 5 2 chr13 4591047 4591470 -115692842 + L1_Mus3 LINE L1 6208 6631 -7 1 620 321 210 97 29 chr13 4594001 4594104 -115690208 + MLT1J2 LTR MaLR 1 110 -338 1 620 299 25 0 24 chr13 4595074 4595115 -115689197 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 1 620 609 248 82 13 chr13 4595332 4595491 -115688821 - ID_B1 SINE B4 0 224 55 1 620 201 355 53 35 chr13 4595930 4596044 -115688268 - L2b LINE L2 -229 3146 3031 1 620 201 330 20 20 chr13 4597435 4597534 -115686778 - L2a LINE L2 -1 3425 3327 1 620 276 252 66 50 chr13 4598236 4598357 -115685955 + MIRb SINE MIR 128 250 -18 1 620 363 23 0 0 chr13 4598413 4598457 -115685855 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 620 4809 144 29 59 chr13 4599482 4600412 -115683900 + RLTR13D6 LTR ERVK 1 902 0 1 620 218 330 61 10 chr13 4600617 4600715 -115683597 + MIR SINE MIR 22 124 -84 1 620 189 0 0 0 chr13 4600787 4600808 -115683504 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 620 3950 171 13 3 chr13 4600976 4601661 -115682651 + RLTR17 LTR ERVK 1 692 0 1 620 4320 144 75 52 chr13 4602165 4602735 -115681577 - RMER17A2 LTR ERVK 0 906 336 1 620 687 84 0 0 chr13 4602735 4602830 -115681482 + (GGGGA)n Simple_repeat Simple_repeat 5 99 0 1 620 4320 144 75 52 chr13 4602830 4603145 -115681167 - RMER17A2 LTR ERVK -571 335 1 1 620 1236 210 135 129 chr13 4603737 4603836 -115680476 + RLTR24 LTR ERV1 1 101 -428 1 620 769 39 55 8 chr13 4603836 4603964 -115680348 + (TCTCC)n Simple_repeat Simple_repeat 4 137 0 1 620 1236 210 135 129 chr13 4603964 4604390 -115679922 + RLTR24 LTR ERV1 102 529 0 1 620 212 227 11 0 chr13 4604547 4604635 -115679677 + GA-rich Low_complexity Low_complexity 2 90 0 1 620 23 0 0 0 chr13 4607481 4607504 -115676808 + AT_rich Low_complexity Low_complexity 1 23 0 1 620 216 0 0 0 chr13 4607577 4607601 -115676711 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1 620 180 0 0 0 chr13 4607686 4607706 -115676606 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 620 22 0 0 0 chr13 4607914 4607936 -115676376 + AT_rich Low_complexity Low_complexity 1 22 0 1 620 288 194 112 0 chr13 4608907 4609005 -115675307 + Lx9 LINE L1 7514 7622 -22 1 620 212 0 0 35 chr13 4609010 4609039 -115675273 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1 620 428 184 23 11 chr13 4609056 4609144 -115675168 - MTE2b LTR MaLR -290 89 1 1 620 253 239 45 0 chr13 4609941 4610008 -115674304 + (CATATA)n Simple_repeat Simple_repeat 6 75 0 1 620 232 216 10 10 chr13 4610417 4610515 -115673797 + (TA)n Simple_repeat Simple_repeat 2 99 0 1 620 2010 319 72 32 chr13 4610569 4611740 -115672572 + Lx8 LINE L1 6252 7468 -5 1 620 258 330 8 43 chr13 4612485 4612602 -115671710 + GA-rich Low_complexity Low_complexity 4 116 0 1 620 465 256 60 60 chr13 4612665 4612848 -115671464 - ORR1E LTR MaLR 0 359 177 1 620 932 134 6 0 chr13 4612853 4613010 -115671302 + (GAA)n Simple_repeat Simple_repeat 1 158 0 1 620 516 101 0 0 chr13 4613010 4613098 -115671214 + (CAGAGA)n Simple_repeat Simple_repeat 2 90 0 1 620 2406 36 0 16 chr13 4614036 4614380 -115669932 + L1Md_F3 LINE L1 6276 6584 0 1 620 239 217 104 0 chr13 4614641 4614747 -115669565 + Lx9 LINE L1 7506 7622 -22 1 620 573 348 77 37 chr13 4614782 4615274 -115669038 + L1M5 LINE L1 4744 5255 -891 1 620 450 269 156 9 chr13 4615327 4615552 -115668760 + L1M5 LINE L1 5317 5574 -605 1 620 355 361 98 76 chr13 4616709 4616973 -115667339 + B4 SINE B4 4 273 -19 1 620 333 0 0 0 chr13 4617040 4617077 -115667235 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 620 220 204 0 0 chr13 4617095 4617139 -115667173 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 1 620 488 124 0 9 chr13 4617225 4617331 -115666981 + (TA)n Simple_repeat Simple_repeat 1 105 0 1 620 255 61 0 0 chr13 4617922 4617955 -115666357 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 620 604 247 19 0 chr13 4618000 4618158 -115666154 - Lx4A LINE L1 -768 6290 6130 1 620 372 74 0 0 chr13 4618156 4618210 -115666102 + Lx4A LINE L1 5196 5249 -628 1 620 5252 162 25 24 chr13 4618195 4618667 -115665645 + Lx LINE L1 4833 5291 -592 1 620 1325 81 40 0 chr13 4618667 4618840 -115665472 + B2_Mm2 SINE B2 2 181 -14 1 620 5853 127 65 12 chr13 4618840 4620137 -115664175 + Lx LINE L1 5292 6654 0 1 620 2811 139 73 14 chr13 4620162 4620604 -115663708 + Lx4A LINE L1 5318 5784 -1274 1 620 180 0 0 0 chr13 4620604 4620624 -115663688 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 620 2811 125 75 22 chr13 4620624 4620786 -115663526 + Lx4A LINE L1 5785 5967 -1091 1 620 2718 33 33 6 chr13 4620786 4621123 -115663189 - ORR1A0 LTR MaLR 0 346 1 1 620 2811 125 75 22 chr13 4621123 4621301 -115663011 + Lx4A LINE L1 5968 6146 -912 1 620 273 384 57 46 chr13 4621320 4621514 -115662798 - B3A SINE B2 0 198 3 1 620 339 349 47 98 chr13 4621820 4622179 -115662133 - MER47B DNA MER2_type -49 369 29 1 620 1698 196 82 14 chr13 4622196 4622563 -115661749 + ORR1B1 LTR MaLR 3 394 0 1 620 7330 65 9 13 chr13 4622945 4624138 -115660174 - L1Md_F2 LINE L1 -2 6580 5391 1 620 2026 76 3 0 chr13 4624134 4624423 -115659889 + L1Md_F2 LINE L1 5121 5410 -473 1 620 250 320 115 45 chr13 4624553 4624710 -115659602 + Charlie1 DNA MER1_type 6 173 -2608 1 620 315 250 104 68 chr13 4624732 4624981 -115659331 + Charlie1 DNA MER1_type 2482 2739 -42 1 620 696 302 10 19 chr13 4624987 4625193 -115659119 - MTEa LTR MaLR -54 325 122 1 620 319 196 0 0 chr13 4625218 4625274 -115659038 - MTEa LTR MaLR -323 56 1 1 620 1873 50 3 5 chr13 4625914 4626170 -115658142 + L1Md_F2 LINE L1 5358 5606 -753 1 620 7854 61 0 4 chr13 4626172 4627168 -115657144 + L1Md_F2 LINE L1 5591 6582 0 1 620 1932 267 43 100 chr13 4627831 4628819 -115655493 + RMER1C Other Other 185 1168 -174 1 620 405 0 0 0 chr13 4628819 4628864 -115655448 + (TTCC)n Simple_repeat Simple_repeat 3 47 0 1 620 1932 281 50 112 chr13 4628864 4629014 -115655298 + RMER1C Other Other 1169 1341 -1 1 620 4273 20 12 0 chr13 4630394 4630881 -115653431 + MT2_Mm LTR ERVL 1 493 0 1 620 32524 81 6 1 chr13 4630881 4636192 -115648120 + MERVL_2A-int LTR ERVL 1 5453 -308 1 620 337 139 26 53 chr13 4636211 4636287 -115648025 + ORR1A3-int LTR MaLR 567 640 -1323 1 620 230 224 95 95 chr13 4636269 4636325 -115647987 + ORR1A3-int LTR MaLR 558 613 -1350 1 620 1766 45 0 0 chr13 4636325 4636545 -115647767 + MT2_Mm LTR ERVL 1 220 -273 1 620 432 0 0 0 chr13 4636596 4636644 -115647668 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 620 4751 74 10 10 chr13 4636916 4637177 -115647135 + MERVL_2A-int LTR ERVL 56 317 -5168 1 620 4343 48 19 0 chr13 4637177 4637716 -115646596 + L1Md_F2 LINE L1 6034 6582 0 1 620 4751 74 10 10 chr13 4637716 4638124 -115646188 + MERVL_2A-int LTR ERVL 318 725 -4760 1 620 31004 114 20 1 chr13 4638118 4642716 -115641596 + MERVL_2A-int LTR ERVL 946 5629 -132 1 620 253 159 15 60 chr13 4642716 4642783 -115641529 + ORR1A3-int LTR MaLR 567 630 -1333 1 620 338 85 0 0 chr13 4642783 4642830 -115641482 + MERVL-int LTR ERVL 5439 5485 0 1 620 4008 50 0 0 chr13 4642830 4643305 -115641007 + MT2C_Mm LTR ERVL 1 475 0 1 620 490 264 82 112 chr13 4643411 4643607 -115640705 - B3A SINE B2 -8 190 1 1 620 1957 137 18 42 chr13 4645348 4645683 -115638629 - ORR1A2 LTR MaLR 0 327 1 1 620 499 236 203 0 chr13 4645692 4645815 -115638497 - RSINE1 SINE B4 -13 152 5 1 620 386 352 106 40 chr13 4645865 4646010 -115638302 - MLT2B3 LTR ERVL -149 405 2 1 620 452 296 47 120 chr13 4646010 4646244 -115638068 - MTEa LTR MaLR -161 218 2 1 620 28 0 0 0 chr13 4646643 4646671 -115637641 + AT_rich Low_complexity Low_complexity 1 28 0 1 620 267 248 16 199 chr13 4646678 4646936 -115637376 - Lx8 LINE L1 -9 7464 7254 1 620 272 233 110 0 chr13 4646959 4647032 -115637280 + Lx8 LINE L1 6827 6907 -566 1 620 614 308 28 39 chr13 4647200 4647484 -115636828 + B4A SINE B4 4 284 -8 1 620 217 132 56 19 chr13 4647511 4647546 -115636766 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 620 270 0 0 0 chr13 4647546 4647576 -115636736 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 620 217 132 56 19 chr13 4647576 4647594 -115636718 + (CA)n Simple_repeat Simple_repeat 2 19 0 2 620 299 338 73 53 chr13 4647754 4647982 -115636330 - ORR1E LTR MaLR -3 376 128 2 620 2652 86 48 8 chr13 4647946 4648344 -115635968 - BGLII LTR ERVK -7 414 1 2 620 455 318 45 7 chr13 4648344 4648499 -115635813 - ORR1E LTR MaLR -196 163 3 2 620 455 275 15 8 chr13 4649757 4649889 -115634423 - MER5A1 DNA MER1_type -24 142 10 2 620 1184 101 0 6 chr13 4650492 4650671 -115633641 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 2 620 418 376 21 0 chr13 4650671 4650812 -115633500 - B1F2 SINE Alu -5 144 1 2 620 1706 190 45 48 chr13 4651584 4652004 -115632308 - MTD LTR MaLR 0 419 1 2 620 13948 234 32 23 chr13 4652061 4657532 -115626780 - ETnERV2-int LTR ERVK -1179 6227 3 2 620 2354 135 31 10 chr13 4657543 4657932 -115626380 - RLTR9D LTR ERVK -6 397 1 2 620 644 206 55 28 chr13 4658198 4658343 -115625969 - B1_Mur4 SINE Alu -1 149 1 2 620 37 62 0 0 chr13 4659347 4659412 -115624900 + AT_rich Low_complexity Low_complexity 1 65 0 2 620 262 286 26 13 chr13 4659838 4659916 -115624396 + B4 SINE B4 7 85 -207 2 620 3627 123 50 59 chr13 4659963 4660096 -115624216 - RMER17A LTR ERVK -15 736 585 2 620 390 21 0 0 chr13 4660096 4660143 -115624169 + (TGG)n Simple_repeat Simple_repeat 2 48 0 2 620 3627 123 50 59 chr13 4660143 4660752 -115623560 - RMER17A LTR ERVK -167 584 2 2 620 2265 186 2 9 chr13 4660850 4661269 -115623043 + MTC LTR MaLR 2 417 -4 2 620 22 70 0 0 chr13 4661404 4661447 -115622865 + AT_rich Low_complexity Low_complexity 1 43 0 2 620 330 67 0 0 chr13 4661524 4661569 -115622743 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 620 214 29 28 28 chr13 4661918 4661954 -115622358 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2 620 605 153 11 43 chr13 4662375 4662559 -115621753 + GA-rich Low_complexity Low_complexity 1 178 0 2 620 22 0 0 0 chr13 4663437 4663459 -115620853 + AT_rich Low_complexity Low_complexity 1 22 0 2 620 573 15 0 0 chr13 4663802 4663868 -115620444 + (TA)n Simple_repeat Simple_repeat 1 66 0 2 620 972 287 90 20 chr13 4667310 4667692 -115616620 - MTD LTR MaLR -14 405 1 2 620 470 288 153 25 chr13 4668186 4668389 -115615923 + Lx8 LINE L1 7103 7331 -142 2 620 417 20 0 0 chr13 4668391 4668441 -115615871 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 620 228 190 0 0 chr13 4668441 4668520 -115615792 + GA-rich Low_complexity Low_complexity 2 80 0 2 620 26 0 0 0 chr13 4668787 4668813 -115615499 + AT_rich Low_complexity Low_complexity 1 26 0 2 620 1287 114 5 19 chr13 4668813 4669019 -115615293 - Lx LINE L1 0 6654 6452 2 620 192 77 0 0 chr13 4669094 4669120 -115615192 + (CAT)n Simple_repeat Simple_repeat 2 27 0 2 620 195 42 0 0 chr13 4670631 4670655 -115613657 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 620 435 83 0 0 chr13 4670660 4670720 -115613592 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 620 383 373 86 42 chr13 4670978 4671314 -115612998 - LTR40b LTR ERVL -107 355 5 2 620 467 301 89 33 chr13 4672484 4672697 -115611615 - Lx6 LINE L1 -26 7434 7210 2 620 253 306 41 72 chr13 4672718 4672912 -115611400 - BGLII LTR ERVK -13 408 221 2 620 708 311 16 12 chr13 4672924 4673168 -115611144 - Lx6 LINE L1 -574 6886 6642 2 620 1182 252 114 12 chr13 4673173 4673337 -115610975 - MTEb LTR MaLR -12 367 182 2 620 3245 124 89 2 chr13 4673337 4673863 -115610449 - Lx LINE L1 -2 6652 6081 2 620 1182 252 114 12 chr13 4673863 4674031 -115610281 - MTEb LTR MaLR -198 181 1 2 620 422 244 149 7 chr13 4674035 4674317 -115609995 - L1MB3 LINE L1 -22 6149 5828 2 620 1865 121 37 3 chr13 4674504 4674802 -115609510 + ORR1A2 LTR MaLR 1 308 -19 2 620 233 228 45 102 chr13 4676241 4676329 -115607983 + ID4_ SINE ID 1 83 0 2 620 797 291 51 23 chr13 4676760 4677017 -115607295 + B4A SINE B4 6 269 -23 2 620 1243 121 19 5 chr13 4677087 4677294 -115607018 + Lx LINE L1 6438 6647 -7 2 620 22 35 0 0 chr13 4677325 4677354 -115606958 + AT_rich Low_complexity Low_complexity 1 29 0 2 620 626 328 0 6 chr13 4677420 4677601 -115606711 + B3A SINE B2 3 182 -16 2 620 26 0 0 0 chr13 4678339 4678365 -115605947 + AT_rich Low_complexity Low_complexity 1 26 0 2 620 10329 142 32 22 chr13 4678406 4680858 -115603454 + L1VL4 LINE L1 285 2753 -806 2 620 27776 120 21 10 chr13 4680849 4685947 -115598365 + L1_Mus2 LINE L1 218 5234 -649 2 620 564 15 0 0 chr13 4685947 4686012 -115598300 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 620 27776 87 12 4 chr13 4686012 4687263 -115597049 + L1_Mus2 LINE L1 5235 6566 0 2 620 6792 138 24 5 chr13 4687267 4689141 -115595171 + L1_Mus3 LINE L1 4729 6632 -6 2 620 204 133 21 43 chr13 4690512 4690559 -115593753 + (TTA)n Simple_repeat Simple_repeat 2 47 0 2 620 278 315 114 38 chr13 4690616 4690748 -115593564 - B1F2 SINE Alu -2 147 6 2 620 225 273 37 75 chr13 4691448 4691555 -115592757 + Charlie24 DNA MER1_type 1431 1533 -917 2 620 291 324 60 13 chr13 4691690 4691840 -115592472 - MLT1C LTR MaLR -23 444 288 2 620 318 333 11 0 chr13 4693286 4693373 -115590939 + RSINE1 SINE B4 56 143 -22 2 620 23 33 0 0 chr13 4693389 4693419 -115590893 + AT_rich Low_complexity Low_complexity 1 30 0 2 620 214 310 0 0 chr13 4694061 4694119 -115590193 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 620 455 298 82 15 chr13 4694125 4694285 -115590027 - B3A SINE B2 -36 180 14 2 620 23 0 0 0 chr13 4694301 4694324 -115589988 + AT_rich Low_complexity Low_complexity 1 23 0 2 620 4360 237 40 3 chr13 4694324 4695282 -115589030 - Lx5 LINE L1 0 7050 6058 2 620 2618 194 29 7 chr13 4695267 4695817 -115588495 - L1_Mur2 LINE L1 -359 5518 4957 2 620 1097 293 123 60 chr13 4695824 4696304 -115588008 - RMER13A LTR ERVK -39 821 312 2 620 3162 67 0 2 chr13 4696540 4696951 -115587361 + L1_Mm LINE L1 4201 4611 -1272 2 620 3365 93 22 4 chr13 4696951 4697450 -115586862 + L1_Mus4 LINE L1 6125 6632 -4 2 620 672 252 15 0 chr13 4698267 4698398 -115585914 - ETnERV2-int LTR ERVK -204 7202 7070 2 620 2240 102 112 79 chr13 4698707 4699110 -115585202 - RLTR9B2 LTR ERVK 0 420 5 2 620 304 358 100 13 chr13 4700874 4701024 -115583288 - RSINE1 SINE B4 0 165 3 2 620 546 228 44 63 chr13 4701964 4702123 -115582189 + RMER1C Other Other 876 1031 -311 2 620 458 344 25 25 chr13 4702149 4702346 -115581966 - B3A SINE B2 -1 197 1 2 620 2550 117 2 5 chr13 4702377 4702772 -115581540 - Lx2 LINE L1 -1 6996 6603 2 620 310 209 15 0 chr13 4702924 4702991 -115581321 + RMER1C Other Other 1029 1096 -246 2 620 186 43 0 0 chr13 4703011 4703034 -115581278 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 620 340 236 17 68 chr13 4703034 4703152 -115581160 + RMER1C Other Other 1222 1333 -9 2 620 399 298 7 51 chr13 4703172 4703310 -115581002 - Lx8 LINE L1 -311 7162 7031 2 620 216 0 0 0 chr13 4703670 4703694 -115580618 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 620 411 21 0 0 chr13 4703748 4703796 -115580516 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 620 226 263 91 100 chr13 4704122 4704232 -115580080 + Charlie1b DNA MER1_type 205 313 -210 2 620 189 0 0 0 chr13 4706483 4706504 -115577808 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 620 280 332 78 9 chr13 4706856 4707087 -115577225 + MER33 DNA MER1_type 38 284 -40 2 620 2515 119 12 29 chr13 4707185 4707600 -115576712 - L1_Mus3 LINE L1 -9 6629 6222 2 620 851 109 6 0 chr13 4708374 4708530 -115575782 + (TG)n Simple_repeat Simple_repeat 1 157 0 2 620 414 0 0 0 chr13 4708530 4708575 -115575737 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 620 263 319 222 16 chr13 4710113 4710298 -115574014 + ID_B1 SINE B4 2 224 0 2 620 265 200 37 28 chr13 4710877 4710985 -115573327 + (TA)n Simple_repeat Simple_repeat 2 110 0 2 620 29 78 0 0 chr13 4711745 4711809 -115572503 + AT_rich Low_complexity Low_complexity 1 64 0 2 620 231 304 0 14 chr13 4712718 4712788 -115571524 + B4 SINE B4 14 82 -210 2 620 285 324 31 197 chr13 4712863 4712988 -115571324 + B4A SINE B4 99 194 -98 2 620 420 20 0 0 chr13 4712988 4713037 -115571275 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 620 285 324 31 197 chr13 4713037 4713134 -115571178 + B4A SINE B4 195 284 -8 2 620 3932 119 36 39 chr13 4714646 4714748 -115569564 - L1_Mm LINE L1 -1134 4749 4663 2 620 755 65 8 16 chr13 4714748 4714874 -115569438 + L1Md_F2 LINE L1 6458 6582 0 2 620 3932 119 36 39 chr13 4714874 4715460 -115568852 - L1_Mm LINE L1 -1221 4662 4063 2 620 1056 134 0 0 chr13 4715672 4715843 -115568469 + (TC)n Simple_repeat Simple_repeat 2 172 0 2 620 446 317 112 11 chr13 4715849 4716037 -115568275 - ID_B1 SINE B4 -8 216 10 2 620 249 254 0 0 chr13 4716480 4716535 -115567777 + RMER1C Other Other 1274 1328 -14 2 620 315 242 21 68 chr13 4717321 4717463 -115566849 - B4 SINE B4 -153 139 7 2 620 22 35 0 0 chr13 4717695 4717724 -115566588 + AT_rich Low_complexity Low_complexity 1 29 0 2 620 305 243 101 22 chr13 4717731 4717870 -115566442 + L1MCa LINE L1 1825 1974 -4534 2 620 848 115 0 14 chr13 4718430 4718571 -115565741 + (TCCC)n Simple_repeat Simple_repeat 3 141 0 2 77 669 230 0 0 chr13 4718571 4718749 -115565563 + CT-rich Low_complexity Low_complexity 3 180 0 2 621 219 242 0 0 chr13 4719309 4719371 -115564941 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 621 492 18 0 0 chr13 4719371 4719428 -115564884 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 621 2253 186 122 73 chr13 4719432 4720005 -115564307 - RLTR18 LTR ERVK -15 601 1 2 621 547 338 78 15 chr13 4720953 4721157 -115563155 + ID_B1 SINE B4 2 218 -6 2 621 245 317 33 0 chr13 4721291 4721351 -115562961 - ID SINE ID -151 73 12 2 621 642 378 8 21 chr13 4721465 4721700 -115562612 + B4A SINE B4 2 233 -59 2 621 312 125 0 0 chr13 4721709 4721773 -115562539 + (A)n Simple_repeat Simple_repeat 1 64 0 2 621 241 322 0 0 chr13 4721801 4721891 -115562421 + (CATA)n Simple_repeat Simple_repeat 1 90 0 2 621 264 200 0 0 chr13 4721899 4721954 -115562358 + GA-rich Low_complexity Low_complexity 1 55 0 3 621 1126 92 17 0 chr13 4721961 4722134 -115562178 + (GAGAA)n Simple_repeat Simple_repeat 3 178 0 3 621 354 139 0 0 chr13 4722831 4722903 -115561409 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 621 200 176 0 0 chr13 4722947 4722981 -115561331 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 621 629 335 47 25 chr13 4723021 4723297 -115561015 - B4 SINE B4 -1 291 10 3 621 4189 116 35 34 chr13 4724553 4725319 -115558993 + RMER17A LTR ERVK 1 751 0 3 621 216 0 0 0 chr13 4725338 4725362 -115558950 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 621 523 60 12 24 chr13 4726240 4726325 -115557987 + (TCCC)n Simple_repeat Simple_repeat 4 87 0 3 621 231 342 42 34 chr13 4726364 4726482 -115557830 - PB1D9 SINE Alu 0 120 2 3 621 1078 89 0 7 chr13 4728630 4728777 -115555535 + B1_Mus1 SINE Alu 2 147 -1 3 621 765 160 12 32 chr13 4728779 4729025 -115555287 + GA-rich Low_complexity Low_complexity 1 241 0 3 621 825 99 0 0 chr13 4729561 4729682 -115554630 + (TTTC)n Simple_repeat Simple_repeat 1 121 0 3 621 684 156 13 3 chr13 4729682 4729989 -115554323 + CT-rich Low_complexity Low_complexity 1 310 0 3 621 22 56 0 0 chr13 4730398 4730434 -115553878 + AT_rich Low_complexity Low_complexity 1 36 0 3 621 279 346 60 73 chr13 4730436 4730670 -115553642 - MIRb SINE MIR -37 231 1 3 621 252 86 0 0 chr13 4730907 4730942 -115553370 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 621 35 41 0 0 chr13 4730981 4731030 -115553282 + AT_rich Low_complexity Low_complexity 1 49 0 3 621 5419 100 18 32 chr13 4731403 4732251 -115552061 - L1_Mur1 LINE L1 -244 5642 4807 3 621 23 0 0 0 chr13 4732253 4732276 -115552036 + AT_rich Low_complexity Low_complexity 1 23 0 3 621 2000 246 31 16 chr13 4732280 4732731 -115551581 - Lx5 LINE L1 -17 7033 6576 3 621 2944 172 28 81 chr13 4732724 4733667 -115550645 + Lx5 LINE L1 5254 6161 -889 3 621 545 301 48 5 chr13 4735170 4735377 -115548935 + ID_B1 SINE B4 3 218 -6 3 621 24 32 0 0 chr13 4737452 4737483 -115546829 + AT_rich Low_complexity Low_complexity 1 31 0 3 621 339 333 0 0 chr13 4737493 4737604 -115546708 + L1_Mm LINE L1 5430 5540 -343 3 621 1047 334 95 22 chr13 4737588 4738221 -115546091 + Lx8 LINE L1 6627 7305 -168 3 621 3508 15 2 0 chr13 4738473 4738868 -115545444 - MTA_Mm LTR MaLR 0 396 1 3 621 8264 40 3 31 chr13 4739668 4741021 -115543291 - L1Md_F2 LINE L1 -8 6574 5290 3 621 1125 35 14 7 chr13 4741021 4741165 -115543147 - B1_Mus2 SINE Alu -2 145 1 3 621 5313 43 5 112 chr13 4741165 4741179 -115543133 - L1_Mm LINE L1 -594 5289 5289 3 621 1206 54 0 0 chr13 4741179 4741327 -115542985 - B1_Mus1 SINE Alu 0 148 1 3 621 5313 43 5 112 chr13 4741327 4741458 -115542854 - L1Md_F2 LINE L1 -594 5289 5160 3 621 550 258 113 25 chr13 4741510 4741713 -115542599 - ID_B1 SINE B4 0 224 4 3 621 21 36 0 0 chr13 4742710 4742738 -115541574 + AT_rich Low_complexity Low_complexity 1 28 0 3 621 735 241 0 0 chr13 4743358 4743499 -115540813 - B1F2 SINE Alu -8 141 1 3 621 369 271 213 0 chr13 4743499 4743621 -115540691 - ID_B1 SINE B4 -72 152 5 3 621 23 54 0 0 chr13 4743893 4743930 -115540382 + AT_rich Low_complexity Low_complexity 1 37 0 3 621 207 0 0 0 chr13 4744701 4744724 -115539588 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 621 288 0 0 0 chr13 4744924 4744956 -115539356 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 621 510 83 0 0 chr13 4744956 4745027 -115539285 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 621 246 214 0 0 chr13 4745033 4745089 -115539223 + GA-rich Low_complexity Low_complexity 1 56 0 3 621 237 228 24 6 chr13 4745289 4745367 -115538945 - PB1D9 SINE Alu 0 120 40 3 621 648 355 102 38 chr13 4746047 4746105 -115538207 - MER70B LTR ERVL -176 402 341 3 621 1166 108 37 11 chr13 4746105 4746292 -115538020 - B2_Mm2 SINE B2 -3 192 1 3 621 648 355 102 38 chr13 4746292 4746605 -115537707 - MER70B LTR ERVL -238 340 7 3 621 202 394 0 0 chr13 4747433 4747560 -115536752 + (TATATG)n Simple_repeat Simple_repeat 6 132 0 3 621 572 352 17 50 chr13 4747562 4747643 -115536669 - B4 SINE B4 0 292 222 3 621 549 0 0 0 chr13 4747643 4747704 -115536608 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 621 572 352 17 50 chr13 4747704 4747921 -115536391 - B4 SINE B4 -71 221 5 3 621 3935 147 9 36 chr13 4750126 4750867 -115533445 - L1_Mur2 LINE L1 -713 5164 4444 3 621 1143 204 272 66 chr13 4751269 4751651 -115532661 + RLTR20C LTR ERVK 1 457 -94 3 621 360 0 0 0 chr13 4751651 4751691 -115532621 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 621 644 285 0 57 chr13 4751691 4751786 -115532526 + RLTR20C LTR ERVK 458 550 -1 3 621 337 280 43 11 chr13 4751786 4751861 -115532451 - PB1D10 SINE Alu -32 85 8 3 621 804 132 0 0 chr13 4751879 4752008 -115532304 + (TTTC)n Simple_repeat Simple_repeat 4 132 0 3 621 249 103 0 25 chr13 4752008 4752048 -115532264 + (TCCC)n Simple_repeat Simple_repeat 1 39 0 3 621 293 0 0 26 chr13 4752048 4752086 -115532226 + (TTG)n Simple_repeat Simple_repeat 2 38 0 3 621 833 185 0 6 chr13 4752089 4752268 -115532044 + CT-rich Low_complexity Low_complexity 1 178 0 3 621 306 389 90 20 chr13 4752280 4752579 -115531733 - L1MEa LINE L1 -5716 354 35 3 621 662 322 5 11 chr13 4752960 4753148 -115531164 + B3 SINE B2 1 187 -29 3 621 201 180 20 0 chr13 4754014 4754064 -115530248 + T-rich Low_complexity Low_complexity 2 52 0 3 621 736 103 0 8 chr13 4754069 4754187 -115530125 - Lx LINE L1 0 6654 6538 3 621 339 25 0 0 chr13 4754190 4754230 -115530082 + (CCCA)n Simple_repeat Simple_repeat 2 41 0 3 621 1608 188 37 14 chr13 4754240 4754536 -115529776 + RLTR41 LTR ERV1 144 446 0 3 621 22 0 0 0 chr13 4754754 4754776 -115529536 + AT_rich Low_complexity Low_complexity 1 22 0 3 621 281 206 16 0 chr13 4755392 4755455 -115528857 + Lx4B LINE L1 6987 7050 -8 3 621 28 0 0 0 chr13 4755462 4755490 -115528822 + AT_rich Low_complexity Low_complexity 1 28 0 3 621 202 73 24 24 chr13 4755507 4755549 -115528763 + (TTG)n Simple_repeat Simple_repeat 2 43 0 3 621 291 286 91 45 chr13 4755549 4755769 -115528543 + L1M4 LINE L1 199 428 -6114 3 621 387 92 0 0 chr13 4755770 4755835 -115528477 + (A)n Simple_repeat Simple_repeat 1 65 0 3 621 648 330 60 9 chr13 4755856 4756192 -115528120 + L1M4 LINE L1 610 962 -5580 3 621 472 320 105 11 chr13 4757204 4757653 -115526659 + L1M4 LINE L1 2916 3406 -3238 3 621 886 205 120 0 chr13 4757675 4757875 -115526437 + URR1A DNA MER1_type 1 224 -2 3 621 230 276 95 47 chr13 4757877 4758109 -115526203 + L1M4 LINE L1 3425 3667 -2977 3 621 29 47 0 0 chr13 4758208 4758251 -115526061 + AT_rich Low_complexity Low_complexity 1 43 0 3 621 240 382 55 61 chr13 4758264 4758626 -115525686 + MLT1A0 LTR MaLR 6 365 0 3 621 297 0 0 0 chr13 4758635 4758668 -115525644 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 621 216 0 0 0 chr13 4758668 4758691 -115525621 + (GA)n Simple_repeat Simple_repeat 2 25 0 3 621 750 168 0 0 chr13 4758759 4758896 -115525416 + GA-rich Low_complexity Low_complexity 1 137 0 3 621 251 177 0 16 chr13 4759067 4759130 -115525182 + GA-rich Low_complexity Low_complexity 3 64 0 3 621 1898 145 95 16 chr13 4759146 4759525 -115524787 - RLTR9E LTR ERVK 0 409 1 3 621 302 0 26 0 chr13 4759542 4759580 -115524732 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 621 312 325 108 16 chr13 4759642 4759836 -115524476 + L1M4 LINE L1 4262 4473 -2171 3 621 631 321 125 20 chr13 4759927 4760456 -115523856 + L1M4 LINE L1 4616 5191 -1453 3 621 471 35 0 0 chr13 4760456 4760513 -115523799 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 621 631 321 125 20 chr13 4760513 4760733 -115523579 + L1M4 LINE L1 5192 5443 -1201 3 621 198 87 65 0 chr13 4760753 4760799 -115523513 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 3 621 262 274 67 67 chr13 4760948 4761038 -115523274 + ID_B1 SINE B4 91 180 -44 3 621 1148 81 117 52 chr13 4761042 4761258 -115523054 + MTB_Mm LTR MaLR 1 221 -158 3 621 18009 67 4 0 chr13 4761260 4763604 -115520708 - L1Md_F2 LINE L1 -459 5424 3072 3 621 1042 62 0 0 chr13 4763603 4763732 -115520580 + L1Md_F2 LINE L1 5457 5585 -298 3 621 7521 47 46 0 chr13 4763733 4764685 -115519627 + L1Md_F2 LINE L1 5587 6582 0 3 621 1427 94 49 0 chr13 4764685 4764888 -115519424 + MTB_Mm LTR MaLR 183 395 -12 3 621 5068 167 37 38 chr13 4764901 4765971 -115518341 + MTB_Mm-int LTR MaLR 30 1098 0 3 621 2808 99 5 69 chr13 4765971 4766406 -115517906 + MTB_Mm LTR MaLR 1 407 0 3 621 572 158 70 21 chr13 4766428 4766440 -115517872 - Lx9 LINE L1 -129 7515 7505 3 621 279 0 0 0 chr13 4766440 4766471 -115517841 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 621 2068 228 117 6 chr13 4766471 4767109 -115517203 - Lx9 LINE L1 -140 7504 6793 3 621 1671 275 89 39 chr13 4767088 4767787 -115516525 - L1_Rod LINE L1 -6354 818 85 3 621 22 0 0 0 chr13 4768112 4768134 -115516178 + AT_rich Low_complexity Low_complexity 1 22 0 3 621 559 16 0 0 chr13 4768547 4768609 -115515703 + L1Md_F2 LINE L1 5525 5586 -297 3 621 8194 40 7 0 chr13 4768609 4769597 -115514715 + L1Md_F2 LINE L1 5587 6581 -1 3 621 216 135 0 0 chr13 4770105 4770142 -115514170 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 621 402 21 0 0 chr13 4770144 4770191 -115514121 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 621 360 0 0 0 chr13 4770191 4770230 -115514082 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 621 288 77 0 0 chr13 4771017 4771056 -115513256 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 3 621 227 322 33 7 chr13 4772774 4772927 -115511385 + GA-rich Low_complexity Low_complexity 5 161 0 3 621 295 274 21 0 chr13 4773026 4773121 -115511191 + CT-rich Low_complexity Low_complexity 6 102 0 3 621 221 200 42 28 chr13 4775007 4775079 -115509233 + (TATATG)n Simple_repeat Simple_repeat 3 75 0 3 621 445 294 188 4 chr13 4775377 4775616 -115508696 - B4A SINE B4 -8 284 2 3 621 663 125 0 0 chr13 4775640 4775744 -115508568 + (TCTA)n Simple_repeat Simple_repeat 3 106 0 3 621 32 26 0 0 chr13 4775751 4775790 -115508522 + AT_rich Low_complexity Low_complexity 1 39 0 3 621 318 50 0 0 chr13 4775790 4775830 -115508482 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 621 201 39 0 0 chr13 4775833 4775859 -115508453 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 621 342 337 30 0 chr13 4775885 4775986 -115508326 - RSINE1 SINE B4 -57 108 5 3 621 21 36 0 0 chr13 4776672 4776700 -115507612 + AT_rich Low_complexity Low_complexity 1 28 0 3 621 209 143 48 0 chr13 4776974 4777016 -115507296 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 3 621 283 309 36 0 chr13 4778444 4778528 -115505784 + B3A SINE B2 1 87 -111 3 621 396 190 0 0 chr13 4779079 4779158 -115505154 + (CA)n Simple_repeat Simple_repeat 2 80 0 3 621 228 111 0 0 chr13 4779331 4779367 -115504945 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 621 409 339 55 65 chr13 4781945 4782220 -115502092 + B4A SINE B4 3 274 -18 4 621 221 182 0 22 chr13 4783325 4783370 -115500942 + CT-rich Low_complexity Low_complexity 1 44 0 4 621 3397 241 63 91 chr13 4783373 4784821 -115499491 - RMER1A Other Other 0 1030 11 4 621 492 290 92 89 chr13 4785614 4785985 -115498327 - Lx8 LINE L1 -2 7471 7100 4 621 238 132 151 0 chr13 4785985 4786038 -115498274 - Lx8 LINE L1 -572 6901 6841 4 621 237 200 82 0 chr13 4786793 4786878 -115497434 - Lx9 LINE L1 0 7644 7553 4 621 326 378 52 73 chr13 4786917 4787212 -115497100 - B4A SINE B4 -1 291 3 4 621 269 311 44 0 chr13 4787610 4787700 -115496612 + MLT1F1 LTR MaLR 3 96 -473 4 621 694 344 37 0 chr13 4787852 4788122 -115496190 - B4 SINE B4 0 292 13 4 621 2943 169 100 22 chr13 4788941 4789581 -115494731 - RMER6C LTR ERVK 0 690 1 4 621 22 0 0 0 chr13 4790775 4790797 -115493515 + AT_rich Low_complexity Low_complexity 1 22 0 4 621 497 275 27 74 chr13 4791086 4791235 -115493077 - MTEb LTR MaLR -153 226 85 4 621 393 58 0 0 chr13 4791282 4791334 -115492978 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 621 229 222 25 89 chr13 4791423 4791502 -115492810 + B1_Mm SINE Alu 64 137 -10 4 621 240 35 0 0 chr13 4791502 4791531 -115492781 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 621 474 360 40 32 chr13 4791536 4791783 -115492529 + MLT1E3 LTR MaLR 376 624 0 4 621 25 0 0 0 chr13 4792129 4792154 -115492158 + AT_rich Low_complexity Low_complexity 1 25 0 4 621 7381 116 4 2 chr13 4792285 4793669 -115490643 - L1_Mus4 LINE L1 -1 6635 5248 4 621 4601 151 2 9 chr13 4793645 4794455 -115489857 - L1_Mur2 LINE L1 -1651 4226 3422 4 621 2108 205 10 7 chr13 4794499 4794906 -115489406 - Lx4A LINE L1 -1 7057 6650 4 621 1480 179 151 0 chr13 4794911 4795236 -115489076 - ORR1B1-int LTR MaLR -1589 374 1 4 621 1755 186 3 78 chr13 4795236 4795597 -115488715 - ORR1B1 LTR MaLR -20 374 41 4 621 317 236 31 51 chr13 4796281 4796430 -115487882 - B1_Mus2 SINE Alu -1 148 3 4 621 1841 51 0 4 chr13 4796651 4796886 -115487426 - ORR1A1 LTR MaLR -12 334 101 4 621 1871 146 56 93 chr13 4796886 4797294 -115487018 - RLTR9C LTR ERVK 0 393 1 4 621 492 110 0 0 chr13 4797297 4797370 -115486942 - ETnERV2-int LTR ERVK -3 7403 7331 4 621 4091 187 22 36 chr13 4797580 4799626 -115484686 - ETnERV2-int LTR ERVK -3321 4085 2356 4 621 930 133 0 18 chr13 4800133 4800301 -115484011 - RLTR13D1 LTR ERVK -156 650 486 4 621 2758 148 50 4 chr13 4800301 4800781 -115483531 - ETnERV2-int LTR ERVK -4409 2997 2496 4 621 3855 151 100 44 chr13 4800806 4801742 -115482570 - ETnERV2-int LTR ERVK -5321 2085 1097 4 621 318 230 45 45 chr13 4801720 4801852 -115482460 - ETnERV2-int LTR ERVK -4522 322 191 4 621 782 123 12 38 chr13 4801856 4802016 -115482296 - ORR1A1 LTR MaLR -189 157 2 4 621 11857 59 93 2 chr13 4802017 4803659 -115480653 - ORR1A1-int LTR MaLR 0 1792 2 4 621 1755 55 17 4 chr13 4803660 4803896 -115480416 - ORR1A1 LTR MaLR 0 346 108 4 621 419 284 49 0 chr13 4804047 4804149 -115480163 + RSINE1 SINE B4 28 134 -31 4 621 25 65 0 0 chr13 4804149 4804195 -115480117 + AT_rich Low_complexity Low_complexity 1 46 0 4 621 224 346 12 71 chr13 4804240 4804324 -115479988 + ID4 SINE ID 4 82 -1 4 621 240 274 28 28 chr13 4805994 4806103 -115478209 + HAL1 LINE L1 1914 2022 -485 4 621 745 326 80 23 chr13 4807214 4807276 -115477036 - MTEb LTR MaLR -3 376 318 4 621 1314 227 82 61 chr13 4807276 4807652 -115476660 + ORR1C2 LTR MaLR 1 384 0 4 621 745 326 80 23 chr13 4807652 4807938 -115476374 - MTEb LTR MaLR -62 317 8 4 621 1730 160 30 33 chr13 4808113 4808443 -115475869 - ORR1A4 LTR MaLR 0 329 1 4 621 25 0 0 0 chr13 4808805 4808830 -115475482 + AT_rich Low_complexity Low_complexity 1 25 0 4 621 563 280 23 58 chr13 4808989 4809160 -115475152 - MTEa LTR MaLR -208 171 7 4 621 277 324 36 18 chr13 4809427 4809601 -115474711 - L1_Mur1 LINE L1 -2370 3776 3600 4 621 1777 189 210 34 chr13 4810079 4810555 -115473757 - Lx4B LINE L1 -4 7054 6495 4 621 3350 102 19 28 chr13 4810551 4811085 -115473227 + L1_Mur2 LINE L1 4250 4778 -1099 4 621 319 201 117 7 chr13 4811094 4811239 -115473073 - Lx9 LINE L1 -4 7640 7480 4 621 243 415 0 0 chr13 4812391 4812473 -115471839 + B3 SINE B2 4 85 -131 4 621 267 103 0 0 chr13 4813115 4813154 -115471158 + (T)n Simple_repeat Simple_repeat 1 39 0 4 621 37752 41 1 3 chr13 4813235 4819461 -115464851 + L1Md_T LINE L1 241 6552 -33 4 621 392 108 37 44 chr13 4819631 4819767 -115464545 + (TCTG)n Simple_repeat Simple_repeat 2 136 0 4 621 189 0 0 0 chr13 4819768 4819789 -115464523 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 621 206 231 0 19 chr13 4820539 4820592 -115463720 + (CAAAG)n Simple_repeat Simple_repeat 3 54 0 4 621 369 365 20 14 chr13 4821798 4821945 -115462367 - B1F2 SINE Alu 0 149 2 4 621 33 56 0 0 chr13 4822184 4822238 -115462074 + AT_rich Low_complexity Low_complexity 1 54 0 4 621 312 27 0 0 chr13 4822418 4822455 -115461857 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 621 861 45 0 0 chr13 4822478 4822589 -115461723 - B1_Mus1 SINE Alu 0 148 38 4 621 28 48 0 0 chr13 4822688 4822730 -115461582 + AT_rich Low_complexity Low_complexity 1 42 0 4 621 254 196 8 130 chr13 4822740 4822863 -115461449 - Lx9 LINE L1 -34 7610 7503 4 621 207 0 0 0 chr13 4823539 4823562 -115460750 + (T)n Simple_repeat Simple_repeat 1 23 0 4 621 445 360 54 27 chr13 4824509 4824596 -115459716 + B4A SINE B4 5 93 -199 4 621 324 0 0 0 chr13 4824596 4824632 -115459680 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 621 445 360 54 27 chr13 4824632 4824767 -115459545 + B4A SINE B4 94 233 -59 4 621 4510 154 46 23 chr13 4824778 4825650 -115458662 - RLTR13D6 LTR ERVK -33 869 1 4 621 912 87 240 7 chr13 4825698 4825848 -115458464 + B2_Mm2 SINE B2 2 186 -9 4 621 2188 117 22 163 chr13 4826756 4827309 -115457003 - IAPLTR2_Mm LTR ERVK 0 475 1 4 621 6070 42 3 19 chr13 4827311 4828067 -115456245 - IAPEz-int LTR ERVK -2 6479 5736 4 621 2220 68 0 0 chr13 4828066 4828344 -115455968 - IAPEz-int LTR ERVK -4845 1636 1359 4 621 3479 94 13 28 chr13 4828344 4829165 -115455147 - IAPEz-int LTR ERVK -5819 662 10 4 621 365 111 0 0 chr13 4829178 4829232 -115455080 - IAPEz-int LTR ERVK -1931 56 3 4 621 2254 123 38 127 chr13 4829234 4829755 -115454557 - IAPLTR2_Mm LTR ERVK 0 475 1 4 621 306 296 105 33 chr13 4829766 4829916 -115454396 - L1_Mur3 LINE L1 -160 5720 5564 4 621 302 0 26 0 chr13 4829916 4829954 -115454358 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 621 306 296 105 33 chr13 4829954 4830013 -115454299 - L1_Mur3 LINE L1 -317 5563 5497 4 621 435 271 17 17 chr13 4830049 4830169 -115454143 - PB1D7 SINE Alu 0 120 1 4 621 406 333 14 0 chr13 4831127 4831268 -115453044 - RSINE1 SINE B4 -19 146 4 4 621 180 111 0 0 chr13 4831560 4831587 -115452725 + (ATG)n Simple_repeat Simple_repeat 1 27 0 4 621 516 174 11 27 chr13 4831590 4831773 -115452539 + GA-rich Low_complexity Low_complexity 1 180 0 4 621 216 194 0 0 chr13 4832992 4833028 -115451284 + (CATATA)n Simple_repeat Simple_repeat 4 39 0 4 621 649 121 61 0 chr13 4833209 4833308 -115451004 - B2_Mm2 SINE B2 -88 107 3 4 621 186 169 33 33 chr13 4833519 4833580 -115450732 + CT-rich Low_complexity Low_complexity 1 61 0 4 621 614 317 103 13 chr13 4833618 4833851 -115450461 - B4 SINE B4 -38 254 1 4 621 299 243 0 19 chr13 4834166 4834271 -115450041 + (CATATA)n Simple_repeat Simple_repeat 4 106 0 4 621 261 0 0 0 chr13 4834271 4834300 -115450012 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 621 508 340 13 13 chr13 4834323 4834475 -115449837 - RSINE1 SINE B4 -2 163 12 4 621 230 358 36 24 chr13 4834402 4834485 -115449827 - B3 SINE B2 -132 84 1 4 621 31 44 0 0 chr13 4834742 4834787 -115449525 + AT_rich Low_complexity Low_complexity 1 45 0 4 621 303 319 33 0 chr13 4835309 4835400 -115448912 + B4 SINE B4 164 257 -35 4 621 1025 240 72 0 chr13 4835433 4835687 -115448625 + Lx3C LINE L1 6716 6996 -1 4 621 591 85 0 0 chr13 4837134 4837216 -115447096 + (TCCC)n Simple_repeat Simple_repeat 3 84 0 4 621 2280 173 0 0 chr13 4838236 4838600 -115445712 - Lx4A LINE L1 -1 7057 6694 4 621 2598 89 45 13 chr13 4838764 4839160 -115445152 + RLTR9E LTR ERVK 1 409 0 4 621 592 370 40 16 chr13 4839657 4839904 -115444408 - B4 SINE B4 0 292 40 4 621 623 94 10 0 chr13 4840473 4840569 -115443743 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 4 621 346 357 61 72 chr13 4840877 4841239 -115443073 + ORR1D2 LTR MaLR 13 370 0 4 621 760 233 98 167 chr13 4841793 4841867 -115442445 - RLTR16 LTR ERVK 0 505 415 4 621 369 0 0 0 chr13 4841867 4841908 -115442404 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 621 760 233 98 167 chr13 4841908 4842112 -115442200 - RLTR16 LTR ERVK -91 414 218 4 621 1144 22 7 0 chr13 4842112 4842249 -115442063 - B1_Mm SINE Alu -9 138 1 4 621 760 233 98 167 chr13 4842249 4842509 -115441803 - RLTR16 LTR ERVK -288 217 3 4 621 437 323 67 29 chr13 4842570 4842809 -115441503 + MLT1E3 LTR MaLR 377 624 0 4 621 198 235 110 68 chr13 4842811 4842957 -115441355 + L3 LINE CR1 1309 1460 -3029 4 621 198 0 0 0 chr13 4843025 4843047 -115441265 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 621 193 318 0 31 chr13 4844603 4844668 -115439644 + L3b LINE CR1 320 382 -100 4 621 545 303 36 103 chr13 4844669 4844864 -115439448 + B3A SINE B2 14 195 -3 4 621 984 105 13 0 chr13 4845337 4845490 -115438822 + L1_Mus3 LINE L1 6476 6630 -8 4 621 2023 64 0 0 chr13 4845871 4846135 -115438177 - L1Md_F2 LINE L1 -585 5997 5734 4 621 2026 96 58 3 chr13 4846135 4846427 -115437885 + L1_Mus1 LINE L1 6246 6553 -14 4 621 1151 263 90 12 chr13 4846430 4846773 -115437539 - MTD LTR MaLR -38 381 12 4 621 5179 123 6 11 chr13 4847518 4847718 -115436594 + L1VL4 LINE L1 190 391 -5911 4 621 3412 152 130 101 chr13 4847718 4848163 -115436149 - RMER17A2 LTR ERVK 0 906 446 4 621 306 0 0 0 chr13 4848163 4848197 -115436115 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 621 3412 152 130 101 chr13 4848197 4848630 -115435682 - RMER17A2 LTR ERVK -461 445 4 4 621 5179 123 6 11 chr13 4848630 4849233 -115435079 + L1VL4 LINE L1 392 989 -5313 4 621 1460 58 5 21 chr13 4849240 4849433 -115434879 - L1_Mus1 LINE L1 -297 6270 6081 4 77 2223 78 0 0 chr13 4849433 4849727 -115434585 + L1_Mus1 LINE L1 6273 6566 -1 4 622 10623 177 355 10 chr13 4849740 4850057 -115434255 + Lx2 LINE L1 1336 1669 -4217 4 622 282 29 0 0 chr13 4850057 4850092 -115434220 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 622 10623 177 355 10 chr13 4850092 4852315 -115431997 + Lx2 LINE L1 1670 4856 -1030 4 622 279 0 0 0 chr13 4852315 4852346 -115431966 + (TGG)n Simple_repeat Simple_repeat 3 33 0 4 622 10623 177 355 10 chr13 4852346 4853017 -115431295 + Lx2 LINE L1 4857 5656 -230 4 622 1083 88 0 7 chr13 4853018 4853166 -115431146 + B1_Mm SINE Alu 1 147 0 4 622 902 156 0 12 chr13 4853166 4853335 -115430977 + GA-rich Low_complexity Low_complexity 1 167 0 5 622 4944 159 34 14 chr13 4853335 4854352 -115429960 + Lx2 LINE L1 5827 6971 -29 4 622 266 0 29 0 chr13 4854355 4854389 -115429923 + (TAAAA)n Simple_repeat Simple_repeat 3 37 0 5 622 6523 97 50 18 chr13 4854607 4855719 -115428593 + Lx3_Mus LINE L1 5486 6612 -397 5 622 23 78 0 0 chr13 4855740 4855791 -115428521 + AT_rich Low_complexity Low_complexity 1 51 0 5 622 305 322 17 0 chr13 4856057 4856172 -115428140 - MLT1D LTR MaLR -7 498 382 5 622 276 30 0 0 chr13 4856268 4856301 -115428011 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 622 606 252 112 6 chr13 4856344 4856504 -115427808 - B4A SINE B4 -10 282 106 5 622 718 316 10 21 chr13 4856847 4857041 -115427271 + B3 SINE B2 18 209 -7 5 622 337 304 132 12 chr13 4857085 4857328 -115426984 - L1M4 LINE L1 -1186 4960 4689 5 622 292 303 50 59 chr13 4858031 4858390 -115425922 + L1MA4 LINE L1 5650 6002 -298 5 622 21 0 0 0 chr13 4858989 4859010 -115425302 + AT_rich Low_complexity Low_complexity 1 21 0 5 622 210 196 0 110 chr13 4859217 4859284 -115425028 + A-rich Low_complexity Low_complexity 1 58 0 5 622 266 0 29 0 chr13 4859284 4859318 -115424994 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 622 210 196 0 110 chr13 4859318 4859359 -115424953 + A-rich Low_complexity Low_complexity 59 97 0 5 622 772 266 34 5 chr13 4859692 4859896 -115424416 - B3 SINE B2 -5 211 2 5 622 678 329 55 81 chr13 4861793 4862140 -115422172 + ORR1E LTR MaLR 21 358 -1 5 622 243 0 0 0 chr13 4862438 4862465 -115421847 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 622 257 264 140 21 chr13 4862652 4862745 -115421567 - MIRb SINE MIR -36 232 129 5 622 1325 237 32 19 chr13 4863318 4863628 -115420684 - Lx6 LINE L1 -11 7449 7136 5 622 892 231 43 0 chr13 4863626 4863698 -115420614 - Lx6 LINE L1 -634 6826 6746 5 622 207 0 0 0 chr13 4863698 4863721 -115420591 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 622 892 231 43 0 chr13 4863721 4863856 -115420456 - Lx6 LINE L1 -715 6745 6611 5 622 5697 186 99 39 chr13 4863858 4864411 -115419901 - L1_Mur2 LINE L1 -213 5667 5067 5 622 294 70 0 23 chr13 4864411 4864455 -115419857 + U2 snRNA snRNA 1 43 -145 5 622 5697 186 99 39 chr13 4864455 4865171 -115419141 - L1_Mur2 LINE L1 -213 5066 4287 5 622 317 24 0 23 chr13 4865171 4865214 -115419098 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 5 622 5697 186 99 39 chr13 4865214 4865307 -115419005 - L1_Mur2 LINE L1 -1594 4286 4177 5 622 2556 163 40 25 chr13 4865338 4865816 -115418496 - RLTR20A LTR ERVK -56 485 1 5 622 1350 163 141 15 chr13 4865816 4866075 -115418237 + RMER6D LTR ERVK 425 716 -4 5 622 5738 197 45 30 chr13 4866077 4867137 -115417175 - L1_Mur2 LINE L1 -2321 3559 2467 5 622 189 0 0 0 chr13 4867137 4867158 -115417154 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 5 622 5738 197 45 30 chr13 4867158 4867222 -115417090 - L1_Mur2 LINE L1 -3414 2466 2397 5 622 1478 54 22 0 chr13 4867222 4867406 -115416906 - B2_Mm1t SINE B2 -4 189 2 5 622 5738 197 45 30 chr13 4867406 4867746 -115416566 - L1_Mur2 LINE L1 -3484 2396 2075 5 622 8291 48 0 4 chr13 4867810 4869096 -115415216 - L1Md_F3 LINE L1 -1 6583 5303 5 622 6737 49 16 3 chr13 4869103 4869989 -115414323 - L1_Mm LINE L1 -3283 2600 1704 5 622 2581 99 119 34 chr13 4869989 4870427 -115413885 + IAPLTR2_Mm LTR ERVK 1 475 0 5 622 326 94 0 19 chr13 4870429 4870483 -115413829 + IAPEz-int LTR ERVK 3 55 -1932 5 622 1123 58 10 139 chr13 4870468 4870670 -115413642 + IAPEz-int LTR ERVK 18 193 -6288 5 622 228 327 0 0 chr13 4870670 4870725 -115413587 + RLTR27 LTR ERVK 221 275 -34 5 622 3390 66 5 14 chr13 4870725 4871301 -115413011 + IAPEz-int LTR ERVK 168 662 -5819 5 622 442 66 0 32 chr13 4871301 4871364 -115412948 + IAPEz-int LTR ERVK 1359 1419 -5062 5 622 1849 111 4 4 chr13 4871353 4871615 -115412697 + IAPEz-int LTR ERVK 2236 2497 -5183 5 622 932 73 24 0 chr13 4871612 4871735 -115412577 + IAPEz-int LTR ERVK 4785 4910 -2770 5 622 26363 13 2 0 chr13 4871735 4874685 -115409627 + IAPEz-int LTR ERVK 3525 6481 0 5 622 2615 92 119 34 chr13 4874685 4875123 -115409189 + IAPLTR2_Mm LTR ERVK 1 475 0 5 622 4342 117 5 2 chr13 4875123 4876440 -115407872 - L1Md_A LINE L1 -4174 1709 446 5 622 3173 191 29 91 chr13 4876443 4876990 -115407322 - L1_Mur2 LINE L1 -3823 2057 1504 5 622 234 62 0 0 chr13 4876990 4877022 -115407290 + (TTA)n Simple_repeat Simple_repeat 1 32 0 5 622 3173 228 43 51 chr13 4877022 4877781 -115406531 - L1_Mur2 LINE L1 -4377 1503 859 5 622 441 366 9 9 chr13 4877807 4878033 -115406279 - L1_Mur2 LINE L1 -7199 529 304 5 622 389 324 106 85 chr13 4878274 4878485 -115405827 - B3A SINE B2 -8 208 1 5 622 21 0 0 0 chr13 4879716 4879737 -115404575 + AT_rich Low_complexity Low_complexity 1 21 0 5 622 21 0 0 0 chr13 4879877 4879898 -115404414 + AT_rich Low_complexity Low_complexity 1 21 0 5 622 1357 232 15 38 chr13 4879909 4880249 -115404063 - Lx7 LINE L1 -1778 5918 5587 5 622 2482 311 118 19 chr13 4880259 4881399 -115402913 + Lx7 LINE L1 5949 7201 -495 5 622 281 181 70 35 chr13 4881490 4881576 -115402736 + (GGGTG)n Simple_repeat Simple_repeat 5 93 0 5 622 205 242 30 0 chr13 4881577 4881643 -115402669 + T-rich Low_complexity Low_complexity 2 69 0 5 622 2279 256 45 90 chr13 4882245 4882739 -115401573 - Lx7 LINE L1 -1 7695 7256 5 622 4729 60 29 0 chr13 4882739 4883359 -115400953 + L1Md_F2 LINE L1 5933 6570 -12 5 622 2279 256 45 90 chr13 4883359 4883806 -115400506 - Lx7 LINE L1 -441 7255 6797 5 622 3114 217 41 7 chr13 4883809 4884496 -115399816 + Lx7 LINE L1 6061 6770 -926 5 622 549 314 175 13 chr13 4884499 4884802 -115399510 - RCHARR1 DNA MER1_type 0 974 623 5 622 277 339 9 35 chr13 4884829 4884945 -115399367 - RCHARR1 DNA MER1_type 0 974 862 5 622 4135 39 0 0 chr13 4885558 4886050 -115398262 + L1Md_T LINE L1 6091 6582 0 5 622 213 284 0 56 chr13 4886470 4886578 -115397734 + CT-rich Low_complexity Low_complexity 2 103 0 5 622 21 0 0 0 chr13 4887325 4887346 -115396966 + AT_rich Low_complexity Low_complexity 1 21 0 5 622 399 396 18 6 chr13 4887519 4887684 -115396628 - ID_B1 SINE B4 -20 204 38 5 622 31231 89 14 11 chr13 4887998 4893050 -115391262 + L1Md_F2 LINE L1 519 5584 -299 5 622 7190 78 5 33 chr13 4893052 4894077 -115390235 + L1Md_F2 LINE L1 5587 6582 0 5 622 232 265 39 19 chr13 4894328 4894432 -115389880 + Lx8 LINE L1 7365 7470 -3 5 622 279 354 35 92 chr13 4894723 4894950 -115389362 - L4 LINE RTE -205 1824 1611 5 622 690 13 0 0 chr13 4895055 4895134 -115389178 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 622 710 270 57 8 chr13 4895726 4896042 -115388270 + MTE2b LTR MaLR 16 379 0 5 622 346 285 21 13 chr13 4897308 4897466 -115386846 - L1ME1 LINE L1 -11 6151 5999 5 622 231 88 0 0 chr13 4897552 4897586 -115386726 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 622 418 364 98 0 chr13 4897595 4897738 -115386574 - B3 SINE B2 -56 160 4 5 622 1173 300 102 24 chr13 4897852 4898778 -115385534 - L1MDa LINE L1 -2349 4188 3191 5 622 30 69 0 0 chr13 4899073 4899131 -115385181 + AT_rich Low_complexity Low_complexity 1 58 0 5 622 411 266 67 52 chr13 4899302 4899512 -115384800 - L1MDa LINE L1 -6414 219 7 5 622 730 320 59 56 chr13 4900164 4900608 -115383704 + Lx9 LINE L1 6738 7182 -462 5 622 21 0 0 0 chr13 4900813 4900834 -115383478 + AT_rich Low_complexity Low_complexity 1 21 0 5 622 977 78 19 7 chr13 4900834 4900988 -115383324 - L1_Mus3 LINE L1 -1 6637 6482 5 622 2738 28 6 3 chr13 4900988 4901314 -115382998 - IAPLTR2b LTR ERVK 0 327 1 5 622 6103 60 35 11 chr13 4901316 4902126 -115382186 - IAPEz-int LTR ERVK -2 6479 5651 5 622 10791 73 42 75 chr13 4902119 4903898 -115380414 - IAPEz-int LTR ERVK -4781 1700 46 5 622 630 310 35 49 chr13 4903898 4903932 -115380380 - Lx2A LINE L1 -139 6869 6831 5 622 2718 34 6 3 chr13 4903932 4904258 -115380054 - IAPLTR2b LTR ERVK 0 327 1 5 622 25032 148 20 67 chr13 4904258 4904927 -115379385 - L1_Mus3 LINE L1 -151 6487 5842 5 622 545 88 63 0 chr13 4904927 4905021 -115379291 - B1_Mm SINE Alu 0 150 41 5 622 25032 148 20 67 chr13 4905021 4910539 -115373773 - L1_Mus3 LINE L1 -151 5841 511 5 622 22 70 0 0 chr13 4911006 4911049 -115373263 + AT_rich Low_complexity Low_complexity 1 43 0 5 622 378 341 58 25 chr13 4911235 4911554 -115372758 + MTEb LTR MaLR 18 358 -21 5 622 1534 162 3 68 chr13 4912047 4912339 -115371973 + ORR1A3 LTR MaLR 1 273 -53 5 622 189 241 0 0 chr13 4912354 4912408 -115371904 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 5 622 1491 205 60 6 chr13 4912408 4912756 -115371556 + Lx9 LINE L1 6949 7315 -329 5 622 258 156 0 0 chr13 4912758 4912803 -115371509 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 622 529 223 39 33 chr13 4912803 4912956 -115371356 + Lx9 LINE L1 7311 7464 -180 5 622 31 47 0 45 chr13 4914845 4914886 -115369426 + AT_rich Low_complexity Low_complexity 1 41 0 5 622 3011 220 9 5 chr13 4914886 4915525 -115368787 - Lx5 LINE L1 0 7050 6409 5 622 31 47 0 45 chr13 4915525 4915572 -115368740 + AT_rich Low_complexity Low_complexity 1 44 0 5 622 288 0 0 0 chr13 4915641 4915673 -115368639 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 622 21 36 0 0 chr13 4916098 4916126 -115368186 + AT_rich Low_complexity Low_complexity 1 28 0 5 622 7004 186 19 19 chr13 4916181 4917991 -115366321 + Lx3C LINE L1 5168 6973 -3 5 622 1558 207 21 70 chr13 4918911 4919296 -115365016 + ORR1C1 LTR MaLR 3 368 -10 5 622 528 364 51 23 chr13 4920126 4920382 -115363930 + B4A SINE B4 1 263 -29 5 622 54 49 0 0 chr13 4920938 4921020 -115363292 + AT_rich Low_complexity Low_complexity 1 82 0 5 622 413 116 14 0 chr13 4922063 4922132 -115362180 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 622 209 159 0 22 chr13 4922133 4922178 -115362134 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 622 265 352 59 46 chr13 4922261 4922413 -115361899 + ID_B1 SINE B4 65 218 -6 5 622 366 275 44 38 chr13 4922280 4922428 -115361884 + B1F1 SINE Alu 5 143 -6 5 622 404 277 17 97 chr13 4922731 4922907 -115361405 + RSINE1 SINE B4 4 165 0 5 622 21 71 0 0 chr13 4922913 4922955 -115361357 + AT_rich Low_complexity Low_complexity 1 42 0 5 622 30971 72 2 4 chr13 4923205 4928255 -115356057 + L1Md_Gf LINE L1 281 5417 -469 5 622 2363 67 25 0 chr13 4928260 4928574 -115355738 + L1Md_T LINE L1 6259 6580 -2 5 622 25 51 0 0 chr13 4929159 4929198 -115355114 + AT_rich Low_complexity Low_complexity 1 39 0 5 622 368 319 46 92 chr13 4929248 4929400 -115354912 - RSINE1 SINE B4 -18 147 3 5 622 211 286 36 0 chr13 4930237 4930293 -115354019 - B3A SINE B2 -126 72 15 5 622 3030 56 0 13 chr13 4930461 4930859 -115353453 + L1Md_F3 LINE L1 6191 6583 -1 5 622 232 250 79 50 chr13 4931552 4931653 -115352659 - MER45R DNA Tip100 -427 1154 1051 5 622 378 294 0 0 chr13 4931994 4932079 -115352233 - B3A SINE B2 -109 89 5 5 622 24 0 0 0 chr13 4932140 4932164 -115352148 + AT_rich Low_complexity Low_complexity 1 24 0 5 622 627 108 0 0 chr13 4932207 4932300 -115352012 + (TG)n Simple_repeat Simple_repeat 1 93 0 5 622 367 267 65 32 chr13 4932337 4932461 -115351851 - RSINE1 SINE B4 -35 130 3 5 622 912 290 24 24 chr13 4933048 4933299 -115351013 + B4 SINE B4 3 253 -39 5 622 411 56 0 0 chr13 4933311 4933365 -115350947 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 622 22 0 0 0 chr13 4933712 4933734 -115350578 + AT_rich Low_complexity Low_complexity 1 22 0 6 622 471 101 0 0 chr13 4934257 4934336 -115349976 + (TCTCTG)n Simple_repeat Simple_repeat 6 84 0 6 622 477 294 29 53 chr13 4934365 4934488 -115349824 - Lx8 LINE L1 -4 7469 7354 6 622 1195 168 0 0 chr13 4934488 4934702 -115349610 - Lx2 LINE L1 0 6997 6784 6 622 477 294 29 53 chr13 4934702 4934786 -115349526 - Lx8 LINE L1 -120 7353 7267 6 622 197 65 32 0 chr13 4934800 4934831 -115349481 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 6 622 425 271 107 40 chr13 4934852 4935029 -115349283 + Lx8 LINE L1 6796 6984 -489 6 622 4168 137 74 7 chr13 4935154 4935845 -115348467 - RMER19A LTR ERVK 0 737 1 6 622 1139 293 83 55 chr13 4936368 4936542 -115347770 + MER45B DNA Tip100 499 693 -347 6 622 498 17 0 0 chr13 4936542 4936601 -115347711 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 622 1139 293 83 55 chr13 4936601 4936953 -115347359 + MER45B DNA Tip100 694 1040 0 6 622 6950 88 20 1 chr13 4937239 4938191 -115346121 - L1_Mus3 LINE L1 -6 6632 5663 6 622 500 138 0 0 chr13 4938189 4938269 -115346043 + L1_Mur3 LINE L1 4143 4222 -1658 6 622 230 372 52 58 chr13 4938747 4938921 -115345391 + LTR16C LTR ERVL 222 394 -95 6 622 341 339 50 64 chr13 4940524 4940726 -115343586 + L1M5 LINE L1 5188 5386 -760 6 622 249 350 10 0 chr13 4940897 4941000 -115343312 + L1M5 LINE L1 5586 5689 -490 6 622 616 326 0 0 chr13 4941719 4941894 -115342418 - LSU-rRNA_Hsa rRNA rRNA -3370 1665 1491 6 622 2266 128 66 55 chr13 4941898 4942368 -115341944 + IAPLTR2_Mm LTR ERVK 1 475 0 6 622 738 254 86 41 chr13 4942437 4942704 -115341608 + Lx8 LINE L1 7195 7473 0 6 622 1311 248 38 97 chr13 4943345 4943840 -115340472 + Lx9 LINE L1 7173 7638 -6 6 622 215 176 19 19 chr13 4945373 4945425 -115338887 + (TATATG)n Simple_repeat Simple_repeat 6 57 0 6 622 609 325 45 11 chr13 4946043 4946308 -115338004 - B4A SINE B4 -18 274 1 6 622 3014 92 54 11 chr13 4947092 4947267 -115337045 + Lx3_Mus LINE L1 5851 6034 -975 6 622 180 0 0 0 chr13 4947267 4947287 -115337025 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 6 622 3014 78 52 9 chr13 4947287 4947566 -115336746 + Lx3_Mus LINE L1 6035 6326 -683 6 622 566 351 52 12 chr13 4948082 4948333 -115335979 + Lx8 LINE L1 6990 7250 -223 6 622 22 35 0 0 chr13 4948546 4948575 -115335737 + AT_rich Low_complexity Low_complexity 1 29 0 6 622 277 245 0 26 chr13 4948692 4948805 -115335507 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 6 622 198 0 0 0 chr13 4950654 4950676 -115333636 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 622 432 37 0 0 chr13 4951069 4951123 -115333189 + (TTTTG)n Simple_repeat Simple_repeat 1 54 0 6 622 518 81 0 26 chr13 4952491 4952555 -115331757 + MTB_Mm LTR MaLR 1 62 -345 6 622 1730 245 120 60 chr13 4952555 4953106 -115331206 - RLTR31A_Mm LTR ERVK 0 584 1 6 622 2407 114 0 9 chr13 4953106 4953450 -115330862 + MTB LTR MaLR 59 399 -1 6 622 319 370 19 0 chr13 4953637 4953799 -115330513 + MER21-int LTR ERV1 2698 2862 -1329 6 622 265 333 31 0 chr13 4954189 4954285 -115330027 + MER21-int LTR ERV1 3215 3313 -878 6 622 25 75 0 0 chr13 4954343 4954396 -115329916 + AT_rich Low_complexity Low_complexity 1 53 0 6 622 4806 146 47 2 chr13 4954580 4955529 -115328783 - Lx2 LINE L1 -4 7004 5908 6 622 9825 109 21 3 chr13 4955527 4957646 -115326666 - L1VL4 LINE L1 -1214 2345 197 6 622 593 133 148 0 chr13 4957734 4957862 -115326450 - RLTR47_MM LTR ERV1 -38 494 348 6 622 716 0 12 0 chr13 4960666 4960750 -115323562 + (TCTA)n Simple_repeat Simple_repeat 4 88 0 6 622 742 214 0 8 chr13 4960755 4960887 -115323425 - B1_Mus1 SINE Alu -12 136 6 6 622 23 68 0 0 chr13 4960956 4961000 -115323312 + AT_rich Low_complexity Low_complexity 1 44 0 6 622 2851 151 32 32 chr13 4962177 4962816 -115321496 - RMER17A2 LTR ERVK -255 634 2 6 622 3458 20 5 0 chr13 4962816 4963210 -115321102 - MTA_Mm LTR MaLR 0 396 1 6 622 532 368 23 23 chr13 4963345 4963559 -115320753 + ID_B1 SINE B4 2 215 -9 6 622 28 48 0 0 chr13 4963562 4963604 -115320708 + AT_rich Low_complexity Low_complexity 1 42 0 6 622 204 233 69 11 chr13 4963667 4963754 -115320558 + (CATATA)n Simple_repeat Simple_repeat 5 96 0 6 622 480 35 0 0 chr13 4963754 4963812 -115320500 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 622 319 41 41 0 chr13 4964069 4964118 -115320194 + (TAA)n Simple_repeat Simple_repeat 2 52 0 6 622 201 253 0 57 chr13 4966277 4966365 -115317947 + GA-rich Low_complexity Low_complexity 3 85 0 6 622 441 0 0 0 chr13 4966466 4966515 -115317797 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 622 453 76 0 0 chr13 4967248 4967314 -115316998 + (TTTA)n Simple_repeat Simple_repeat 1 66 0 6 622 240 358 91 25 chr13 4967728 4967926 -115316386 + LTR52 LTR ERVL 56 266 -155 6 622 279 0 0 0 chr13 4968013 4968044 -115316268 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 622 298 250 62 0 chr13 4968144 4968224 -115316088 - U6 snRNA snRNA -22 85 1 6 622 437 297 36 0 chr13 4970391 4970502 -115313810 + PB1D10 SINE Alu 1 115 -2 6 622 348 324 42 56 chr13 4971541 4971685 -115312627 + B4A SINE B4 107 248 -44 6 622 1115 82 13 0 chr13 4971919 4972078 -115312234 - L1Md_F2 LINE L1 -11 6571 6411 6 622 248 288 13 52 chr13 4972387 4972464 -115311848 + RSINE1 SINE B4 92 165 0 6 622 482 109 11 0 chr13 4972519 4972611 -115311701 + (TC)n Simple_repeat Simple_repeat 1 93 0 6 622 25 0 0 0 chr13 4972855 4972880 -115311432 + AT_rich Low_complexity Low_complexity 1 25 0 6 622 1307 158 8 4 chr13 4972899 4973141 -115311171 - Lx LINE L1 -5 6649 6407 6 622 644 347 96 33 chr13 4973657 4974086 -115310226 + MER88 LTR ERVL 5 460 -4 6 622 269 289 0 73 chr13 4976019 4976101 -115308211 + ID4_ SINE ID 3 78 -5 6 622 306 284 39 137 chr13 4976182 4976284 -115308028 + RSINE1 SINE B4 6 97 -68 6 622 348 111 0 0 chr13 4976301 4976355 -115307957 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 622 212 0 0 35 chr13 4976896 4976925 -115307387 + (TTG)n Simple_repeat Simple_repeat 3 30 0 6 622 3325 82 16 0 chr13 4977715 4978168 -115306144 - L1_Mus3 LINE L1 -9 6629 6170 6 622 1100 64 0 0 chr13 4978169 4978310 -115306002 + L1_Mus3 LINE L1 6022 6162 -476 6 622 509 336 39 1 chr13 4978883 4979062 -115305250 + LTR40a LTR ERVL 2 188 -274 6 622 2910 72 102 29 chr13 4979197 4979640 -115304672 - IAPLTR2_Mm LTR ERVK 0 475 1 6 622 6165 38 4 12 chr13 4979642 4980392 -115303920 - IAPEz-int LTR ERVK -2 6479 5736 6 622 2113 86 0 0 chr13 4980391 4980669 -115303643 - IAPEz-int LTR ERVK -4845 1636 1359 6 77 3388 68 9 16 chr13 4980669 4981180 -115303132 - IAPEz-int LTR ERVK -5819 662 211 6 623 35329 36 2 0 chr13 4981180 4988101 -115296211 + L1Md_T LINE L1 1 5589 -297 6 623 8925 6 0 4 chr13 4988101 4989121 -115295191 + L1Md_T LINE L1 5590 6585 0 6 623 1167 133 44 45 chr13 4989121 4989538 -115294774 - IAPEz-int LTR ERVK -7311 270 3 6 623 3000 73 82 29 chr13 4989540 4989991 -115294321 - IAPLTR2_Mm LTR ERVK 0 475 1 6 623 600 62 0 0 chr13 4990015 4990096 -115294216 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 6 623 313 180 0 0 chr13 4990099 4990160 -115294152 + L1M3 LINE L1 4526 4586 -1554 6 623 2193 262 67 8 chr13 4990175 4990814 -115293498 - Lx9 LINE L1 -668 6976 6300 6 623 453 195 32 8 chr13 4990782 4990906 -115293406 + Lx9 LINE L1 7484 7610 -34 6 623 217 325 82 16 chr13 4992561 4992683 -115291629 - L3 LINE CR1 -3 4486 4357 6 623 222 336 71 45 chr13 4993170 4993282 -115291030 - B2_Mm2 SINE B2 -80 115 1 6 623 308 331 30 83 chr13 4994559 4994712 -115289600 + B1F SINE Alu 6 146 -2 6 623 8452 30 2 0 chr13 4994806 4996099 -115288213 - L1Md_T LINE L1 0 6582 5287 6 623 1389 29 0 0 chr13 4996098 4996282 -115288030 - L1Md_Gf LINE L1 -4503 1383 1103 6 623 219 167 24 0 chr13 4996384 4996426 -115287886 + CT-rich Low_complexity Low_complexity 2 44 0 6 623 357 24 0 0 chr13 4996426 4996468 -115287844 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 623 333 0 0 0 chr13 4996468 4996504 -115287808 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 623 4739 232 49 7 chr13 4996887 4998403 -115285909 - Lx7 LINE L1 -971 6725 5136 6 623 393 123 0 0 chr13 4998777 4998842 -115285470 + (TGGA)n Simple_repeat Simple_repeat 4 68 0 6 623 617 306 51 20 chr13 4999479 4999676 -115284636 + B3 SINE B2 11 213 -3 6 623 1214 295 70 31 chr13 5000098 5000767 -115283545 - L1MC1 LINE L1 -174 6159 5465 1 623 12258 79 3 1 chr13 5000768 5002420 -115281892 + L1Md_F2 LINE L1 3931 5586 -297 2 623 7631 63 4 19 chr13 5002420 5003431 -115280881 + L1Md_F2 LINE L1 5587 6582 0 2 623 25 31 0 0 chr13 5003631 5003663 -115280649 + AT_rich Low_complexity Low_complexity 1 32 0 3 623 752 253 26 47 chr13 5003680 5003871 -115280441 - B3A SINE B2 -29 187 1 4 623 249 266 31 0 chr13 5004214 5004278 -115280034 - RMER1C Other Other -16 1326 1261 5 623 267 31 0 0 chr13 5004334 5004366 -115279946 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 623 310 309 0 0 chr13 5004367 5004435 -115279877 + B3 SINE B2 32 99 -117 7 623 436 186 40 6 chr13 5004445 5004618 -115279694 + (TA)n Simple_repeat Simple_repeat 1 179 0 8 623 377 306 102 66 chr13 5004650 5004846 -115279466 - B3 SINE B2 -13 203 1 9 623 213 146 0 0 chr13 5005337 5005385 -115278927 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 623 21 36 0 0 chr13 5005530 5005558 -115278754 + AT_rich Low_complexity Low_complexity 1 28 0 1 623 388 218 89 0 chr13 5006554 5006655 -115277657 - Lx9 LINE L1 -17 7627 7518 1 623 2850 80 15 3 chr13 5009292 5009682 -115274630 + MTA_Mm LTR MaLR 1 395 -1 1 623 291 253 6 13 chr13 5009812 5009968 -115274344 + (CA)n Simple_repeat Simple_repeat 2 156 0 1 623 217 175 0 0 chr13 5010499 5010539 -115273773 - B4 SINE B4 -250 42 3 1 623 737 286 101 19 chr13 5011667 5011934 -115272378 + B4 SINE B4 2 290 -2 1 623 285 318 32 0 chr13 5012050 5012176 -115272136 - L1MA5 LINE L1 -17 6283 6154 1 623 282 29 0 0 chr13 5012261 5012296 -115272016 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 623 258 337 106 68 chr13 5012988 5013252 -115271060 - B4A SINE B4 -1 291 18 1 623 617 221 0 0 chr13 5013733 5013846 -115270466 + MTC LTR MaLR 5 117 -304 2 623 618 200 9 0 chr13 5013880 5013985 -115270327 - B3 SINE B2 -109 107 2 2 623 1781 178 3 53 chr13 5013985 5014318 -115269994 + MTC LTR MaLR 106 421 0 2 623 4656 98 7 13 chr13 5014581 5015264 -115269048 - L1_Mus3 LINE L1 -2 6636 5958 2 623 1495 138 24 0 chr13 5015264 5015511 -115268801 + L1_Mur2 LINE L1 4586 4838 -1039 2 623 399 375 24 53 chr13 5015550 5015719 -115268593 - B3A SINE B2 -34 164 1 2 623 1513 50 0 0 chr13 5015719 5015898 -115268414 - L1_Mus1 LINE L1 -283 6284 6106 2 623 1799 62 0 0 chr13 5015898 5016125 -115268187 + L1_Mus1 LINE L1 6339 6565 -2 2 623 22 0 0 0 chr13 5016125 5016147 -115268165 + AT_rich Low_complexity Low_complexity 1 22 0 2 623 745 198 100 13 chr13 5016244 5016474 -115267838 - Lx9 LINE L1 -87 7557 7308 2 623 474 88 0 0 chr13 5016564 5016632 -115267680 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 623 39 74 0 0 chr13 5016766 5016847 -115267465 + AT_rich Low_complexity Low_complexity 1 81 0 2 623 371 380 83 12 chr13 5017919 5018087 -115266225 - B4A SINE B4 -85 207 28 3 623 180 0 0 0 chr13 5018219 5018239 -115266073 + (T)n Simple_repeat Simple_repeat 1 20 0 3 623 426 20 0 0 chr13 5019122 5019173 -115265139 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 623 417 308 56 102 chr13 5019400 5019702 -115264610 - B4 SINE B4 -24 268 8 3 623 238 277 97 40 chr13 5020161 5020285 -115264027 + MER33 DNA MER1_type 194 324 0 3 623 465 283 152 21 chr13 5021048 5021239 -115263073 + B3 SINE B2 1 216 0 3 623 581 368 64 30 chr13 5023583 5023849 -115260463 - B4 SINE B4 -4 288 14 3 623 5248 57 1 1 chr13 5024058 5024710 -115259602 + L1Md_F2 LINE L1 5914 6565 -17 3 623 192 77 0 0 chr13 5024758 5024784 -115259528 + (A)n Simple_repeat Simple_repeat 1 26 0 3 623 7544 89 9 7 chr13 5025324 5026965 -115257347 - L1_Mus1 LINE L1 -1 6566 4924 3 623 1929 158 3 6 chr13 5026965 5027277 -115257035 + RLTR10E LTR ERVK 1 311 0 4 623 521 105 26 0 chr13 5027279 5027366 -115256946 + MMERVK10C-int LTR ERVK 4 122 -1865 4 623 235 278 0 18 chr13 5027366 5027421 -115256891 + RLTR27 LTR ERVK 222 275 -34 4 623 862 120 213 18 chr13 5027421 5027590 -115256722 + MMERVK10C-int LTR ERVK 225 426 -7155 4 623 3055 101 27 23 chr13 5027687 5028164 -115256148 + MMERVK10C-int LTR ERVK 441 919 -6662 4 623 21 57 0 0 chr13 5028164 5028199 -115256113 + AT_rich Low_complexity Low_complexity 1 35 0 4 623 1539 168 103 53 chr13 5028310 5028752 -115255560 + MMERVK10C-int LTR ERVK 314 819 -4587 4 623 394 173 123 0 chr13 5028757 5028838 -115255474 + MMERVK10C-int LTR ERVK 1089 1179 -4227 4 623 4264 80 0 14 chr13 5028829 5029398 -115254914 + MMERVK10C-int LTR ERVK 1885 2445 -5136 4 623 21492 76 3 20 chr13 5029420 5032298 -115252014 + MMERVK10C-int LTR ERVK 2813 5642 -1939 4 623 534 82 0 0 chr13 5032289 5032362 -115251950 + MMERVK10C-int LTR ERVK 5761 5833 -1748 4 623 1625 163 49 7 chr13 5032363 5032647 -115251665 + RLTR10E LTR ERVK 16 311 0 4 623 9379 112 22 6 chr13 5032647 5033349 -115250963 - L1_Mm LINE L1 -954 4929 4206 4 623 450 36 0 0 chr13 5033349 5033405 -115250907 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 623 9379 112 22 6 chr13 5033405 5034168 -115250144 - L1_Mm LINE L1 -1678 4205 3440 4 623 484 101 0 0 chr13 5034168 5034237 -115250075 - B1_Mus2 SINE Alu -78 69 1 4 623 490 70 0 0 chr13 5034238 5034309 -115250003 - MusHAL1 LINE L1 -756 1956 1886 4 623 3355 153 80 29 chr13 5034310 5035275 -115249037 - RLTR13D1 LTR ERVK 0 1023 1 4 623 12249 131 11 1 chr13 5035275 5037594 -115246718 - L1Md_A LINE L1 -2789 3094 752 5 623 451 260 16 8 chr13 5037602 5037730 -115246582 - L1Md_A LINE L1 -5813 803 675 5 623 249 307 114 80 chr13 5037792 5038054 -115246258 - L1VL1 LINE L1 -6151 271 1 5 623 262 335 37 27 chr13 5038058 5038274 -115246038 - MLT1A LTR MaLR -22 352 17 5 623 629 364 14 10 chr13 5039366 5039655 -115244657 + B4A SINE B4 2 291 -1 5 623 315 0 0 0 chr13 5039692 5039727 -115244585 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 623 593 294 114 35 chr13 5042282 5042624 -115241688 + Lx8 LINE L1 7105 7473 0 5 623 357 24 0 0 chr13 5043314 5043356 -115240956 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 623 309 323 132 39 chr13 5045195 5045633 -115238679 + L1MEc LINE L1 346 824 -5576 5 623 367 316 107 131 chr13 5045847 5046138 -115238174 + B4 SINE B4 9 292 0 5 623 29 47 0 0 chr13 5046305 5046348 -115237964 + AT_rich Low_complexity Low_complexity 1 43 0 5 623 261 291 48 19 chr13 5046610 5046820 -115237492 + L1MEc LINE L1 2251 2466 -3934 5 623 22 0 0 0 chr13 5047685 5047707 -115236605 + AT_rich Low_complexity Low_complexity 1 22 0 6 623 304 323 42 54 chr13 5047818 5047985 -115236327 + MER58A DNA MER1_type 59 223 -1 6 623 1454 163 12 12 chr13 5048079 5048333 -115235979 - Lx3C LINE L1 -236 5650 5397 6 623 6157 185 45 17 chr13 5048331 5049605 -115234707 + Lx3C LINE L1 5666 6974 -2 6 623 251 320 61 30 chr13 5049638 5049770 -115234542 + L2a LINE L2 3291 3426 0 6 623 367 40 68 0 chr13 5051818 5051892 -115232420 + (CAAA)n Simple_repeat Simple_repeat 2 80 0 6 623 375 113 0 0 chr13 5052643 5052714 -115231598 + (TC)n Simple_repeat Simple_repeat 2 72 0 6 623 765 0 0 0 chr13 5052801 5052886 -115231426 + (TTC)n Simple_repeat Simple_repeat 2 86 0 6 623 250 345 70 26 chr13 5053115 5053258 -115231054 + B3 SINE B2 9 161 -37 6 623 189 107 0 0 chr13 5053262 5053290 -115231022 + (CG)n Simple_repeat Simple_repeat 2 29 0 6 623 281 82 20 0 chr13 5053290 5053338 -115230974 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 623 21 36 0 0 chr13 5053401 5053429 -115230883 + AT_rich Low_complexity Low_complexity 1 28 0 7 623 1966 82 7 7 chr13 5053636 5053917 -115230395 - L1_Mus3 LINE L1 -1 6637 6357 7 623 5439 87 9 7 chr13 5053917 5054655 -115229657 + L1_Mus3 LINE L1 5635 6374 -264 7 623 291 346 61 30 chr13 5055713 5055877 -115228435 - MLT1A0 LTR MaLR -23 342 174 7 623 378 0 0 0 chr13 5055928 5055970 -115228342 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 623 286 275 42 52 chr13 5056078 5056174 -115228138 - B4A SINE B4 -188 104 10 7 623 1080 70 14 0 chr13 5056656 5056799 -115227513 + B1_Mus2 SINE Alu 2 146 -1 7 623 562 311 99 11 chr13 5057396 5057578 -115226734 + ID_B1 SINE B4 12 209 -15 7 623 395 291 11 49 chr13 5057580 5057819 -115226493 + GA-rich Low_complexity Low_complexity 1 230 0 7 623 247 265 15 0 chr13 5060816 5060884 -115223428 - MIR SINE MIR -89 173 105 7 623 1795 309 115 35 chr13 5061286 5062384 -115221928 - Lx7 LINE L1 -444 7252 6067 7 623 3181 70 27 11 chr13 5062688 5063133 -115221179 + L1Md_F2 LINE L1 6128 6579 -3 8 623 36737 8 0 1 chr13 5063140 5068934 -115215378 + L1Md_A LINE L1 1 5586 -297 8 623 9059 3 0 0 chr13 5068934 5069930 -115214382 + L1Md_A LINE L1 5587 6582 0 8 623 2895 275 44 8 chr13 5069935 5070952 -115213360 + L1_Mur3 LINE L1 4724 5777 -103 8 623 207 0 0 0 chr13 5071027 5071050 -115213262 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 623 363 96 0 0 chr13 5072467 5072519 -115211793 + Lx LINE L1 6240 6291 -363 8 623 249 158 0 0 chr13 5073266 5073304 -115211008 - ORR1E LTR MaLR -11 348 311 8 623 1155 257 20 3 chr13 5073863 5074156 -115210156 - Lx6 LINE L1 -1088 6372 6075 8 623 4207 127 53 9 chr13 5074168 5074734 -115209578 + Lx LINE L1 5941 6511 -143 8 623 180 0 0 0 chr13 5074734 5074754 -115209558 + (TGGG)n Simple_repeat Simple_repeat 1 20 0 8 623 4207 127 53 9 chr13 5074754 5074871 -115209441 + Lx LINE L1 6512 6653 -1 8 623 3943 200 101 26 chr13 5074876 5075980 -115208332 - Lx6 LINE L1 -110 5770 4585 8 623 2621 199 42 11 chr13 5075990 5076614 -115207698 + RMER6A LTR ERVK 1 690 0 8 623 4954 203 244 25 chr13 5076614 5076990 -115207322 - Lx6 LINE L1 -1307 4573 4208 8 623 329 0 0 24 chr13 5076990 5077032 -115207280 + (TA)n Simple_repeat Simple_repeat 1 41 0 9 623 4954 203 244 25 chr13 5077032 5078549 -115205763 - Lx6 LINE L1 -1673 4207 2266 8 623 5259 140 45 14 chr13 5078583 5079857 -115204455 - Lx2B LINE L1 -441 6559 5248 9 623 387 0 0 0 chr13 5079857 5079900 -115204412 + (TC)n Simple_repeat Simple_repeat 1 43 0 9 623 628 64 0 21 chr13 5079900 5079996 -115204316 + (TTCC)n Simple_repeat Simple_repeat 2 95 0 9 623 561 143 0 59 chr13 5079999 5080118 -115204194 - Lx2B LINE L1 -626 5251 5140 9 623 297 0 0 0 chr13 5080134 5080167 -115204145 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 623 1691 185 65 11 chr13 5080172 5080698 -115203614 - Lx6 LINE L1 -4235 1645 1087 8 623 3817 68 0 4 chr13 5080776 5081263 -115203049 - L1_Mus1 LINE L1 -1 6566 6082 9 623 1237 83 16 22 chr13 5081263 5081447 -115202865 + B2_Mm2 SINE B2 13 195 0 9 623 833 244 24 4 chr13 5081490 5081745 -115202567 - Lx6 LINE L1 -6610 1118 859 8 623 845 233 52 9 chr13 5082187 5082416 -115201896 + Lx9 LINE L1 6594 6832 -812 9 623 193 29 29 29 chr13 5082417 5082452 -115201860 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 623 4071 264 41 30 chr13 5082485 5083005 -115201307 - Lx6 LINE L1 -246 7214 6708 9 623 2966 76 0 12 chr13 5083005 5083406 -115200906 + MTA_Mm LTR MaLR 1 396 0 1 623 4071 264 41 30 chr13 5083406 5084135 -115200177 - Lx6 LINE L1 -753 6707 5952 9 623 483 107 0 0 chr13 5084158 5084233 -115200079 + (TGAA)n Simple_repeat Simple_repeat 3 77 0 1 623 227 288 49 41 chr13 5084264 5084387 -115199925 + Lx7 LINE L1 7189 7312 -384 1 623 23 54 0 0 chr13 5084588 5084625 -115199687 + AT_rich Low_complexity Low_complexity 1 37 0 1 623 234 302 36 36 chr13 5084625 5084735 -115199577 + MER5B DNA MER1_type 29 138 -40 1 623 554 154 31 0 chr13 5085116 5085278 -115199034 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 1 623 289 329 6 12 chr13 5085302 5085465 -115198847 + (TA)n Simple_repeat Simple_repeat 2 163 0 1 623 6954 78 7 2 chr13 5085644 5085863 -115198449 - L1_Mus1 LINE L1 -1 6566 6347 1 623 189 0 0 0 chr13 5085863 5085884 -115198428 + (TGG)n Simple_repeat Simple_repeat 1 21 0 1 623 6954 86 5 1 chr13 5085884 5087102 -115197210 - L1_Mus1 LINE L1 -221 6346 5124 1 623 2598 96 5 5 chr13 5087103 5087502 -115196810 + L1_Mus1 LINE L1 4705 5103 -780 1 623 492 205 40 17 chr13 5089919 5090093 -115194219 - Lx9 LINE L1 -8 7636 7459 1 623 430 252 86 9 chr13 5090495 5090611 -115193701 + B3 SINE B2 3 127 -89 1 623 1298 187 8 4 chr13 5091165 5091423 -115192889 - Lx2B LINE L1 -498 6502 6244 1 623 36282 29 0 0 chr13 5091423 5098088 -115186224 - L1Md_T LINE L1 0 6585 1 1 623 3291 161 55 11 chr13 5098093 5099024 -115185288 - Lx2B LINE L1 -752 6248 5274 1 623 766 69 0 0 chr13 5099041 5099143 -115185169 + B1_Mm SINE Alu 46 147 0 1 623 24 0 0 0 chr13 5099143 5099167 -115185145 + AT_rich Low_complexity Low_complexity 1 24 0 1 623 368 235 34 34 chr13 5099167 5099286 -115185026 - Lx2B LINE L1 -620 5257 5139 1 623 2045 173 67 11 chr13 5099274 5099719 -115184593 + Lx2B LINE L1 6518 6987 -13 1 623 26 0 0 0 chr13 5100018 5100044 -115184268 + AT_rich Low_complexity Low_complexity 1 26 0 1 623 639 323 6 18 chr13 5100670 5100837 -115183475 + RSINE1 SINE B4 1 165 0 1 623 306 0 0 0 chr13 5102642 5102676 -115181636 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 623 34 42 0 0 chr13 5102903 5102951 -115181361 + AT_rich Low_complexity Low_complexity 1 48 0 1 623 400 214 110 20 chr13 5103004 5103104 -115181208 - B4A SINE B4 -180 112 4 1 623 267 31 0 0 chr13 5104183 5104215 -115180097 + (CAAG)n Simple_repeat Simple_repeat 1 32 0 1 623 2607 168 74 5 chr13 5104322 5104873 -115179439 + Lx4B LINE L1 6244 6832 -226 1 623 288 0 0 0 chr13 5105018 5105050 -115179262 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 623 270 56 0 0 chr13 5105052 5105088 -115179224 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 623 1297 239 30 111 chr13 5105154 5105240 -115179072 - Lx9 LINE L1 -33 7611 7528 1 623 321 47 0 0 chr13 5105240 5105283 -115179029 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 623 1297 239 30 111 chr13 5105283 5105798 -115178514 - Lx9 LINE L1 -117 7527 7060 1 623 486 319 40 47 chr13 5106167 5106261 -115178051 + B4A SINE B4 1 96 -196 1 623 842 146 139 12 chr13 5106261 5106434 -115177878 + B2_Mm2 SINE B2 1 195 0 1 623 486 319 40 47 chr13 5106434 5106615 -115177697 + B4A SINE B4 97 274 -18 1 623 346 236 21 11 chr13 5107380 5107474 -115176838 + HAL1-3A_ME LINE L1 1933 2027 -831 1 623 316 123 24 12 chr13 5107475 5107557 -115176755 + (CAGA)n Simple_repeat Simple_repeat 4 86 0 1 623 847 31 39 0 chr13 5108390 5108517 -115175795 + (TAGA)n Simple_repeat Simple_repeat 3 134 0 1 623 46 33 0 0 chr13 5108669 5108729 -115175583 + AT_rich Low_complexity Low_complexity 1 60 0 1 623 4962 117 47 0 chr13 5108817 5109629 -115174683 + Lx2 LINE L1 5985 6834 -163 1 623 2031 152 52 12 chr13 5110049 5110468 -115173844 + L1_Mur2 LINE L1 4279 4714 -1163 1 623 293 148 358 0 chr13 5110465 5110546 -115173766 + L1_Mur2 LINE L1 4917 5026 -851 1 623 1712 246 174 39 chr13 5110546 5111116 -115173196 - RMER19B LTR ERVK 0 902 256 1 623 1953 120 0 6 chr13 5111116 5111443 -115172869 + L1_Mur2 LINE L1 5064 5388 -489 1 623 417 177 120 40 chr13 5111452 5111552 -115172760 - RLTR20B3 LTR ERVK -11 566 459 1 623 1669 77 0 0 chr13 5111567 5111787 -115172525 - L1_Mus1 LINE L1 0 6567 6348 1 77 1836 80 0 22 chr13 5111788 5112057 -115172255 + L1_Mm LINE L1 5205 5467 -416 1 624 843 279 34 23 chr13 5112046 5112279 -115172033 + Lx5 LINE L1 6783 7020 -30 1 624 541 67 0 0 chr13 5112279 5112354 -115171958 - L1_Mus2 LINE L1 0 6566 6492 1 624 843 279 34 23 chr13 5112354 5112384 -115171928 + Lx5 LINE L1 7021 7049 -1 1 624 22 35 0 0 chr13 5112395 5112424 -115171888 + AT_rich Low_complexity Low_complexity 1 29 0 1 624 180 0 0 0 chr13 5112773 5112793 -115171519 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 624 225 295 94 42 chr13 5112821 5113012 -115171300 + L1MC4 LINE L1 7707 7907 -135 1 624 344 255 131 9 chr13 5113144 5113251 -115171061 + B1F SINE Alu 1 120 -29 1 624 238 323 46 30 chr13 5114074 5114205 -115170107 + B4A SINE B4 160 292 0 1 624 182 382 0 11 chr13 5115352 5115442 -115168870 + L3 LINE CR1 3331 3419 -1070 1 624 1015 129 0 0 chr13 5115648 5115795 -115168517 + B1_Mus1 SINE Alu 1 147 -1 1 624 300 148 0 0 chr13 5115800 5115861 -115168451 + (A)n Simple_repeat Simple_repeat 1 61 0 1 624 1117 106 12 6 chr13 5116027 5116198 -115168114 - B2_Mm2 SINE B2 -4 191 20 1 624 26 30 0 0 chr13 5116515 5116548 -115167764 + AT_rich Low_complexity Low_complexity 1 33 0 1 624 219 114 0 0 chr13 5116893 5116928 -115167384 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 624 676 304 142 19 chr13 5118431 5118573 -115165739 - MTEa LTR MaLR 0 379 217 1 624 423 0 0 0 chr13 5118573 5118620 -115165692 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 1 624 676 300 84 33 chr13 5118620 5118810 -115165502 - MTEa LTR MaLR -163 216 7 1 624 210 227 24 85 chr13 5118979 5119061 -115165251 - L4 LINE RTE -1082 947 871 1 624 234 179 73 15 chr13 5119328 5119396 -115164916 + B3 SINE B2 145 216 0 1 624 33 0 0 0 chr13 5119482 5119515 -115164797 + AT_rich Low_complexity Low_complexity 1 33 0 1 624 258 278 0 0 chr13 5120077 5120131 -115164181 + RMER30 DNA MER1_type 20 73 -129 1 624 978 76 0 0 chr13 5120252 5120384 -115163928 + (CA)n Simple_repeat Simple_repeat 1 132 0 1 624 240 35 0 0 chr13 5120384 5120413 -115163899 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 624 563 0 15 0 chr13 5121040 5121107 -115163205 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 624 477 0 0 0 chr13 5121805 5121858 -115162454 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 624 183 123 0 66 chr13 5121899 5121960 -115162352 + T-rich Low_complexity Low_complexity 4 60 0 1 624 665 302 65 9 chr13 5122022 5122239 -115162073 - MTE2b LTR MaLR -13 366 138 1 624 2188 131 3 0 chr13 5122615 5122943 -115161369 + ORR1A4 LTR MaLR 1 329 0 1 624 359 242 121 0 chr13 5123251 5123350 -115160962 - B1F SINE Alu -11 138 28 1 624 276 336 93 43 chr13 5123350 5123391 -115160921 - ID_B1 SINE B4 -11 213 67 1 624 379 319 229 15 chr13 5124087 5124546 -115159766 - L1MC4a LINE L1 -529 7513 6957 1 624 37015 69 7 17 chr13 5124966 5131194 -115153118 - L1Md_F3 LINE L1 -17 6567 418 1 624 249 319 9 17 chr13 5131202 5131317 -115152995 - Lx7 LINE L1 -18 7678 7565 1 624 15094 80 46 7 chr13 5131311 5133473 -115150839 + L1Md_F2 LINE L1 3340 5585 -298 1 624 7705 68 0 6 chr13 5133474 5134502 -115149810 + L1Md_F2 LINE L1 5587 6582 0 1 624 811 246 17 74 chr13 5134549 5134848 -115149464 - Lx7 LINE L1 -279 7417 7136 1 624 189 0 0 0 chr13 5134942 5134963 -115149349 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 624 189 94 0 0 chr13 5136335 5136367 -115147945 + (CAT)n Simple_repeat Simple_repeat 2 33 0 1 624 440 53 53 0 chr13 5137252 5137328 -115146984 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 624 22 35 0 0 chr13 5137742 5137771 -115146541 + AT_rich Low_complexity Low_complexity 1 29 0 1 624 459 0 0 0 chr13 5137851 5137902 -115146410 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 624 451 326 7 7 chr13 5138036 5138172 -115146140 + RSINE1 SINE B4 17 152 -13 1 624 276 201 25 38 chr13 5138262 5138422 -115145890 + (CATA)n Simple_repeat Simple_repeat 2 159 0 1 624 297 252 30 20 chr13 5138430 5138531 -115145781 + (CA)n Simple_repeat Simple_repeat 1 102 0 1 624 7458 91 8 2 chr13 5139365 5140406 -115143906 - L1_Mus3 LINE L1 -5 6633 5587 1 624 40809 11 0 6 chr13 5140567 5146727 -115137585 - L1Md_A LINE L1 0 6582 465 1 624 5214 114 6 13 chr13 5146791 5147584 -115136728 - L1_Mus3 LINE L1 -2 6636 5849 1 624 198 0 0 0 chr13 5147800 5147822 -115136490 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 624 1243 165 90 4 chr13 5147985 5148253 -115136059 - L1_Mur2 LINE L1 -4047 1830 1540 1 624 2660 78 143 139 chr13 5148265 5148775 -115135537 - RLTR1B LTR ERV1 0 512 1 1 624 1248 238 53 8 chr13 5148775 5149037 -115135275 + Lx5 LINE L1 6777 7050 0 1 624 690 230 50 89 chr13 5149038 5149145 -115135167 - Lx7 LINE L1 -62 7634 7589 1 624 6294 66 10 2 chr13 5149145 5149947 -115134365 - RLTR13C2 LTR ERVK 0 808 1 1 624 690 180 35 127 chr13 5149947 5150108 -115134204 - Lx7 LINE L1 -108 7588 7427 1 624 189 0 0 0 chr13 5150521 5150542 -115133770 + (T)n Simple_repeat Simple_repeat 1 21 0 1 624 380 108 15 0 chr13 5150717 5150761 -115133551 + (TTC)n Simple_repeat Simple_repeat 1 45 0 1 624 1578 11 0 0 chr13 5150761 5150941 -115133371 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 1 624 380 108 15 0 chr13 5150941 5150961 -115133351 + (TTC)n Simple_repeat Simple_repeat 2 21 0 1 624 545 261 59 73 chr13 5150962 5150980 -115133332 - ID_B1 SINE B4 -46 246 181 1 624 937 128 7 0 chr13 5150980 5151121 -115133191 - B1_Mus1 SINE Alu 0 148 7 1 624 545 261 59 73 chr13 5151121 5151153 -115133159 - ID_B1 SINE B4 -46 180 51 1 624 5657 104 3 23 chr13 5151516 5152388 -115131924 - L1_Mus3 LINE L1 -5 6633 5779 1 624 2241 91 44 0 chr13 5152388 5152706 -115131606 - L1_Mus3 LINE L1 -15 6623 6292 1 624 5178 123 4 6 chr13 5152704 5153500 -115130812 - L1_Mm LINE L1 -89 5794 5001 1 624 1044 95 0 26 chr13 5153749 5153900 -115130412 - B1_Mus1 SINE Alu 0 148 2 1 624 189 0 0 0 chr13 5154193 5154214 -115130098 + (A)n Simple_repeat Simple_repeat 1 21 0 1 624 1963 141 19 3 chr13 5154314 5154635 -115129677 + ORR1A3 LTR MaLR 1 326 0 2 624 317 288 19 0 chr13 5156960 5157100 -115127212 - Lx8 LINE L1 -1657 5816 5679 2 624 322 69 35 0 chr13 5157226 5157284 -115127028 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 624 25 51 0 0 chr13 5157301 5157340 -115126972 + AT_rich Low_complexity Low_complexity 1 39 0 2 624 285 98 0 0 chr13 5157402 5157443 -115126869 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 624 874 316 77 6 chr13 5157678 5158031 -115126281 + MTEa LTR MaLR 1 378 -1 2 624 462 299 28 35 chr13 5158431 5158573 -115125739 + RSINE1 SINE B4 3 143 -22 2 624 246 62 0 0 chr13 5158603 5158635 -115125677 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 624 218 122 24 0 chr13 5159087 5159128 -115125184 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 2 624 234 278 2 51 chr13 5159296 5159395 -115124917 - MIRc SINE MIR -74 194 94 2 624 3630 244 63 120 chr13 5160067 5161552 -115122760 - Lx7 LINE L1 -5 7691 6292 2 624 1797 239 23 19 chr13 5162515 5162997 -115121315 - Lx9 LINE L1 -166 7478 6995 2 624 402 293 0 10 chr13 5163106 5163206 -115121106 + MER5A1 DNA MER1_type 53 151 -15 2 624 1293 205 20 4 chr13 5163826 5164076 -115120236 + MTD LTR MaLR 1 254 -165 2 624 1928 102 46 62 chr13 5164079 5164404 -115119908 - ORR1A2 LTR MaLR -7 320 1 2 624 635 203 17 16 chr13 5164405 5164555 -115119757 + MTD LTR MaLR 251 419 -2 2 624 237 33 0 0 chr13 5164673 5164703 -115119609 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 624 477 0 0 0 chr13 5164703 5164755 -115119557 + (TC)n Simple_repeat Simple_repeat 1 53 0 2 624 821 201 0 0 chr13 5164810 5164949 -115119363 - B1_Mur3 SINE Alu -6 143 5 2 624 190 29 28 56 chr13 5164983 5165019 -115119293 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2 624 1154 62 7 0 chr13 5165019 5165164 -115119148 - B1_Mm SINE Alu 0 147 2 2 624 21 82 0 0 chr13 5165224 5165273 -115119039 + AT_rich Low_complexity Low_complexity 1 49 0 2 624 324 191 0 0 chr13 5165559 5165643 -115118669 + (TG)n Simple_repeat Simple_repeat 2 85 0 2 624 305 265 157 0 chr13 5165673 5165775 -115118537 - Lx8 LINE L1 -172 7301 7184 2 624 21 0 0 0 chr13 5166005 5166026 -115118286 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 230 241 108 48 chr13 5166531 5166614 -115117698 - MTEa LTR MaLR -14 365 278 2 624 378 332 30 141 chr13 5166805 5167025 -115117287 - MTEa LTR MaLR 0 379 184 2 624 1842 149 12 67 chr13 5167025 5167370 -115116942 + ORR1A3 LTR MaLR 1 326 0 2 624 284 312 29 59 chr13 5167370 5167387 -115116925 - MTEa LTR MaLR -196 183 167 2 624 629 273 13 6 chr13 5167414 5167589 -115116723 - MTEa LTR MaLR -203 176 6 2 624 393 315 108 25 chr13 5167681 5167979 -115116333 + L1MC LINE L1 3624 3966 -2180 2 624 21 57 0 0 chr13 5168026 5168061 -115116251 + AT_rich Low_complexity Low_complexity 1 35 0 2 624 270 281 156 5 chr13 5169692 5169901 -115114411 - Lx9 LINE L1 -1713 5931 5659 2 624 37326 64 1 23 chr13 5170679 5177740 -115106572 - L1Md_T LINE L1 0 6582 99 2 624 297 0 0 0 chr13 5178682 5178715 -115105597 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 624 237 316 0 0 chr13 5180051 5180127 -115104185 + L1M3 LINE L1 3397 3472 -2668 2 624 490 341 18 12 chr13 5180181 5180350 -115103962 + B4A SINE B4 5 174 -118 2 624 315 71 0 0 chr13 5180452 5180494 -115103818 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 624 10655 159 6 26 chr13 5180735 5181338 -115102974 + L1VL4 LINE L1 572 1169 -5391 2 624 1001 86 178 0 chr13 5181338 5181501 -115102811 + B2_Mm1a SINE B2 2 193 0 2 624 10655 117 17 12 chr13 5181501 5183345 -115100967 + L1VL4 LINE L1 1170 3024 -793 2 624 1581 133 0 72 chr13 5183348 5183624 -115100688 + L1_Mus2 LINE L1 6311 6566 0 2 624 3378 153 75 55 chr13 5184297 5185320 -115098992 - RLTR13D1 LTR ERVK -22 1001 1 2 624 230 354 89 20 chr13 5185876 5185977 -115098335 + PB1D10 SINE Alu 7 114 -3 2 624 214 262 31 62 chr13 5186093 5186158 -115098154 - ID4 SINE ID -72 80 18 2 624 221 57 29 0 chr13 5186669 5186704 -115097608 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 2 624 808 347 11 26 chr13 5186871 5187140 -115097172 + B4A SINE B4 9 273 -19 2 624 304 170 19 0 chr13 5187202 5187255 -115097057 + HAL1-3A_ME LINE L1 1977 2030 -828 2 624 3290 39 15 3 chr13 5187352 5187743 -115096569 + MTA_Mm LTR MaLR 1 396 0 2 624 990 255 128 69 chr13 5187798 5188203 -115096109 - RMER20B LTR ERVK -6 621 193 2 624 278 222 9 66 chr13 5188225 5188331 -115095981 - RMER1B Other Other -45 1021 922 2 624 238 318 26 77 chr13 5188330 5188524 -115095788 - RMER1A Other Other -460 570 387 2 624 340 215 32 11 chr13 5188573 5188667 -115095645 - RMER1B Other Other -926 140 45 2 624 476 32 16 0 chr13 5189438 5189500 -115094812 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 624 13337 165 15 21 chr13 5189708 5190656 -115093656 + L1VL4 LINE L1 545 1483 -2431 2 624 3376 30 0 0 chr13 5190656 5191050 -115093262 + L1Md_A LINE L1 6189 6582 0 2 624 13337 124 28 22 chr13 5191050 5193534 -115090778 + L1VL4 LINE L1 1484 3984 -1899 2 624 1153 144 4 38 chr13 5193531 5193769 -115090543 + Lx5 LINE L1 5671 5900 -1150 2 624 1085 65 0 28 chr13 5193807 5193950 -115090362 - B1_Mus2 SINE Alu -8 139 1 2 624 231 61 0 0 chr13 5193951 5193984 -115090328 + (TTTTG)n Simple_repeat Simple_repeat 4 36 0 2 624 1875 106 31 22 chr13 5194139 5194458 -115089854 + RLTRETN_Mm LTR ERVK 1 322 0 2 624 16993 147 29 20 chr13 5194458 5201268 -115083044 + ETnERV2-int LTR ERVK 1 7208 -198 2 624 1893 102 31 22 chr13 5201268 5201587 -115082725 + RLTRETN_Mm LTR ERVK 1 322 0 2 624 312 261 225 40 chr13 5201727 5201954 -115082358 + L1MD2 LINE L1 6069 6337 -22 2 624 294 337 0 59 chr13 5203523 5203537 -115080775 + ID SINE ID 72 79 -145 2 624 468 328 0 9 chr13 5203537 5203651 -115080661 + PB1D7 SINE Alu 2 114 -6 2 624 519 297 13 43 chr13 5203661 5203893 -115080419 + Lx8 LINE L1 7176 7400 -73 2 624 284 286 0 32 chr13 5203899 5204022 -115080290 + Lx8 LINE L1 7353 7471 -2 2 624 18346 168 92 10 chr13 5204381 5208727 -115075585 - L1_Mus3 LINE L1 -7 6631 1877 2 624 2908 30 11 37 chr13 5208727 5209102 -115075210 + RLTR10B2 LTR ERVK 1 365 0 2 624 18346 169 60 32 chr13 5209102 5210652 -115073660 - L1_Mus3 LINE L1 -4010 1876 307 2 624 26 30 0 0 chr13 5210848 5210881 -115073431 + AT_rich Low_complexity Low_complexity 1 33 0 2 624 195 100 0 0 chr13 5212171 5212201 -115072111 + (GGA)n Simple_repeat Simple_repeat 3 32 0 2 624 1203 107 0 0 chr13 5212201 5212379 -115071933 + (GAA)n Simple_repeat Simple_repeat 3 180 0 2 624 4897 121 16 3 chr13 5212869 5213604 -115070708 - L1_Mus3 LINE L1 0 6638 5894 2 624 5888 101 1 12 chr13 5213604 5214855 -115069457 + L1_Mus1 LINE L1 5207 6433 -134 2 624 713 121 38 8 chr13 5215421 5215554 -115068758 + L1_Mus1 LINE L1 6444 6580 -2 2 624 467 283 63 21 chr13 5215748 5215939 -115068373 + L1MC1 LINE L1 5494 5692 -652 2 624 207 244 0 0 chr13 5215939 5215984 -115068328 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 624 303 225 14 0 chr13 5215984 5216055 -115068257 + HAL1-3A_ME LINE L1 1975 2046 -812 2 624 228 67 0 0 chr13 5216120 5216150 -115068162 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2 624 253 266 64 9 chr13 5216276 5216386 -115067926 + L1MC1 LINE L1 5933 6048 -1737 2 624 451 318 40 0 chr13 5216403 5216601 -115067711 + L1MC1 LINE L1 6118 6323 -10 2 624 594 339 21 21 chr13 5217845 5218128 -115066184 - B4A SINE B4 -9 283 1 2 624 2879 179 2 15 chr13 5219158 5219692 -115064620 - RLTR11A2 LTR ERVK 0 527 1 2 624 634 292 40 0 chr13 5220219 5220421 -115063891 - B3 SINE B2 -6 210 1 2 624 1259 184 28 0 chr13 5220581 5220799 -115063513 - RMER19B LTR ERVK -12 890 667 2 624 6100 153 18 8 chr13 5220799 5222519 -115061793 - Lx LINE L1 -7 6647 4912 2 624 2801 188 102 86 chr13 5222519 5223194 -115061118 - RMER19B LTR ERVK -216 686 1 2 624 246 324 42 84 chr13 5223452 5223691 -115060621 + RMER10A LTR ERVL 193 421 -21 2 624 21 0 0 0 chr13 5225132 5225153 -115059159 + AT_rich Low_complexity Low_complexity 1 21 0 2 624 404 269 0 8 chr13 5225945 5226076 -115058236 - Lx7 LINE L1 -2 7694 7565 2 624 458 278 22 15 chr13 5226087 5226222 -115058090 + Lx7 LINE L1 6859 6994 -702 2 624 701 298 22 22 chr13 5226213 5226436 -115057876 + Lx6 LINE L1 7062 7284 -176 2 624 2491 243 91 8 chr13 5226450 5227064 -115057248 - Lx7 LINE L1 -703 6993 6329 2 624 541 277 101 5 chr13 5227181 5227370 -115056942 - B3 SINE B2 -8 208 2 2 624 206 171 24 0 chr13 5227629 5227670 -115056642 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2 624 219 69 0 0 chr13 5227703 5227732 -115056580 + (TAGA)n Simple_repeat Simple_repeat 2 30 0 2 624 219 266 15 15 chr13 5227967 5228032 -115056280 + B4A SINE B4 9 73 -219 2 624 23 0 0 0 chr13 5229613 5229636 -115054676 + AT_rich Low_complexity Low_complexity 1 23 0 2 624 249 108 0 0 chr13 5229672 5229709 -115054603 + (T)n Simple_repeat Simple_repeat 1 37 0 2 624 230 270 60 39 chr13 5230477 5230566 -115053746 + ID4 SINE ID 7 94 -58 2 624 312 27 0 0 chr13 5230569 5230606 -115053706 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 2 624 890 310 51 26 chr13 5230682 5231033 -115053279 + MTEb LTR MaLR 18 377 -2 2 624 1055 56 0 46 chr13 5231138 5231289 -115053023 - L1_Mm LINE L1 -1214 4669 4526 2 624 1959 72 0 8 chr13 5231287 5231541 -115052771 + L1Md_F2 LINE L1 6308 6559 -23 2 624 398 53 0 17 chr13 5231541 5231599 -115052713 + (TAA)n Simple_repeat Simple_repeat 1 57 0 2 624 788 55 18 0 chr13 5231864 5231973 -115052339 + (TTTTC)n Simple_repeat Simple_repeat 2 112 0 2 624 731 286 158 89 chr13 5231997 5232054 -115052258 - MTEa LTR MaLR -1 378 326 2 624 2335 174 2 12 chr13 5232054 5232483 -115051829 + Lx2 LINE L1 6572 6996 -1 2 624 731 286 158 89 chr13 5232483 5232774 -115051538 - MTEa LTR MaLR -54 325 6 2 624 237 265 65 56 chr13 5233928 5234036 -115050276 + RMER17A2 LTR ERVK 242 350 -556 2 624 384 74 41 21 chr13 5234280 5234377 -115049935 + (TTTTG)n Simple_repeat Simple_repeat 2 100 0 2 624 202 225 0 0 chr13 5234591 5234631 -115049681 + (TATG)n Simple_repeat Simple_repeat 1 40 0 2 624 584 347 123 0 chr13 5234656 5234907 -115049405 - B4A SINE B4 -8 284 3 2 624 608 330 52 90 chr13 5234910 5235463 -115048849 + MT2A LTR ERVL 2 533 0 2 624 420 340 93 99 chr13 5235658 5235693 -115048619 + MLT1D LTR MaLR 1 30 -475 3 624 526 301 164 50 chr13 5235693 5236217 -115048095 - MER34A1 LTR ERV1 0 587 4 3 624 420 340 93 99 chr13 5236217 5236524 -115047788 + MLT1D LTR MaLR 31 341 -164 3 624 367 330 32 50 chr13 5236991 5237211 -115047101 - MER31B LTR ERV1 -223 243 28 3 624 560 264 48 79 chr13 5238043 5238335 -115045977 - L1MA4 LINE L1 -447 5853 5571 3 624 202 154 18 55 chr13 5239280 5239335 -115044977 + (TTTG)n Simple_repeat Simple_repeat 1 53 0 3 624 26 0 0 0 chr13 5240583 5240609 -115043703 + AT_rich Low_complexity Low_complexity 1 26 0 3 624 330 335 95 33 chr13 5240999 5241209 -115043103 + L4 LINE RTE 654 876 -1153 3 624 396 0 0 0 chr13 5241431 5241475 -115042837 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 624 230 143 20 0 chr13 5241496 5241545 -115042767 + GA-rich Low_complexity Low_complexity 1 50 0 3 9 7662 54 5 12 chr13 5242628 5243905 -115040407 - L1Md_F2 LINE L1 -12 6570 5305 3 625 2883 56 158 2 chr13 5243905 5244316 -115039996 - IAPLTR2_Mm LTR ERVK 0 475 1 3 625 4824 48 5 7 chr13 5244316 5244339 -115039973 - L1Md_F2 LINE L1 -579 5304 5282 3 625 8561 55 8 14 chr13 5244342 5245443 -115038869 - IAPEz-int LTR ERVK -27 6454 5360 3 625 5169 135 4 104 chr13 5245443 5246547 -115037765 - L1Md_F LINE L1 -5459 1265 273 3 625 4542 123 42 0 chr13 5246551 5247244 -115037068 - L1Md_F LINE L1 -5501 1018 297 3 625 221 256 36 12 chr13 5247494 5247577 -115036735 + (CATA)n Simple_repeat Simple_repeat 4 88 0 3 625 297 75 0 0 chr13 5247581 5247621 -115036691 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 625 551 294 88 39 chr13 5248861 5249066 -115035246 - B4A SINE B4 -67 225 11 3 625 2926 41 0 0 chr13 5249191 5249533 -115034779 + ORR1A1 LTR MaLR 1 342 -4 3 625 440 325 6 49 chr13 5249906 5250068 -115034244 - B3A SINE B2 0 198 44 3 625 241 230 0 47 chr13 5250227 5250291 -115034021 - tRNA-Ala-GCA tRNA tRNA -9 66 6 3 625 241 229 102 20 chr13 5250340 5250438 -115033874 - L1MB5 LINE L1 -4 6176 6071 3 625 724 276 151 50 chr13 5250517 5250887 -115033425 + MTE2a LTR MaLR 12 421 0 3 625 315 358 58 5 chr13 5250916 5251107 -115033205 - L1MB5 LINE L1 -225 5949 5749 3 625 318 294 24 147 chr13 5251212 5251243 -115033069 - B2_Mm2 SINE B2 -10 185 155 3 625 432 0 0 0 chr13 5251243 5251291 -115033021 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 625 513 294 24 147 chr13 5251291 5251470 -115032842 - B3A SINE B2 -34 164 1 3 625 456 328 118 31 chr13 5251947 5252142 -115032170 + B4A SINE B4 71 282 -10 3 625 300 120 0 0 chr13 5253316 5253366 -115030946 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 625 316 415 28 18 chr13 5254532 5254814 -115029498 + B4A SINE B4 2 286 -6 3 625 624 276 88 0 chr13 5259675 5259845 -115024467 - B4A SINE B4 -2 290 106 3 625 4905 96 16 3 chr13 5260281 5260980 -115023332 - L1_Mus4 LINE L1 -6 6630 5923 3 625 595 14 0 0 chr13 5261009 5261083 -115023229 + B1_Mm SINE Alu 74 147 0 3 625 250 218 0 0 chr13 5261330 5261385 -115022927 + (TGG)n Simple_repeat Simple_repeat 1 55 0 3 625 391 333 33 20 chr13 5261521 5261674 -115022638 + B3A SINE B2 2 156 -42 3 625 1808 35 13 25 chr13 5262107 5262344 -115021968 + L1Md_F2 LINE L1 6348 6581 -1 3 625 3987 120 5 35 chr13 5265078 5265698 -115018614 + MT2B LTR ERVL 1 601 0 3 625 1180 56 0 0 chr13 5265860 5266004 -115018308 + B1_Mm SINE Alu 2 145 -2 3 625 288 77 0 0 chr13 5266005 5266044 -115018268 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 625 329 246 57 71 chr13 5266081 5266221 -115018091 - MER92A LTR ERV1 -1 411 274 3 625 772 233 12 0 chr13 5266360 5266532 -115017780 + ORR1D1 LTR MaLR 16 189 -185 3 625 27 0 0 0 chr13 5266692 5266719 -115017593 + AT_rich Low_complexity Low_complexity 1 27 0 3 625 6737 225 69 31 chr13 5266807 5268569 -115015743 - Lx7 LINE L1 0 7696 5868 3 625 31 44 0 0 chr13 5269217 5269262 -115015050 + AT_rich Low_complexity Low_complexity 1 45 0 3 625 358 275 122 40 chr13 5269576 5269862 -115014450 + L1M2 LINE L1 5172 5479 -833 3 625 249 368 7 22 chr13 5269862 5269998 -115014314 + B1F SINE Alu 1 134 -15 3 625 363 44 0 0 chr13 5270008 5270053 -115014259 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 625 358 295 111 94 chr13 5270053 5270269 -115014043 + L1M2 LINE L1 5480 5701 -611 3 625 242 170 0 0 chr13 5270479 5270532 -115013780 + L1MA7 LINE L1 6232 6284 -7 3 625 224 219 0 0 chr13 5271497 5271538 -115012774 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 625 312 273 21 83 chr13 5271588 5271684 -115012628 - B4A SINE B4 -68 224 135 3 625 234 270 43 53 chr13 5271662 5271756 -115012556 - RSINE1 SINE B4 -69 96 4 3 625 23 0 0 0 chr13 5272382 5272405 -115011907 + AT_rich Low_complexity Low_complexity 1 23 0 3 625 258 191 103 0 chr13 5272639 5272707 -115011605 + L1M5 LINE L1 5625 5699 -474 3 625 238 261 0 42 chr13 5273031 5273103 -115011209 + RMER17C LTR ERVK 342 410 0 3 625 836 272 0 27 chr13 5273177 5273396 -115010916 - B3 SINE B2 -3 213 1 3 625 22 0 0 0 chr13 5273855 5273877 -115010435 + AT_rich Low_complexity Low_complexity 1 22 0 3 625 1259 91 11 0 chr13 5274467 5274643 -115009669 + B2_Mm1t SINE B2 2 179 -14 3 625 921 31 0 44 chr13 5274652 5274788 -115009524 + (GAAAA)n Simple_repeat Simple_repeat 5 134 0 3 625 344 64 0 82 chr13 5275037 5275122 -115009190 + (TTTG)n Simple_repeat Simple_repeat 2 79 0 3 625 249 370 23 38 chr13 5275134 5275266 -115009046 - ID_B1 SINE B4 -2 222 93 3 625 699 12 0 0 chr13 5275491 5275571 -115008741 + (GAA)n Simple_repeat Simple_repeat 3 82 0 3 625 583 282 175 5 chr13 5276431 5276819 -115007493 + L1_Mur3 LINE L1 4134 4587 -1293 3 625 1052 298 49 25 chr13 5276827 5277233 -115007079 + Lx8 LINE L1 7048 7463 -10 3 625 3052 8 43 0 chr13 5277322 5277674 -115006638 + IAPLTR1_Mm LTR ERVK 1 367 0 3 625 29871 23 29 0 chr13 5277674 5281292 -115003020 + IAPEz-int LTR ERVK 8 3729 -2752 3 625 13704 27 1 3 chr13 5281278 5282936 -115001376 + IAPEz-int LTR ERVK 4827 6481 0 3 625 3065 6 43 0 chr13 5282936 5283288 -115001024 + IAPLTR1_Mm LTR ERVK 1 367 0 3 625 492 301 6 6 chr13 5283889 5284063 -115000249 + (CA)n Simple_repeat Simple_repeat 2 175 0 3 625 424 309 6 6 chr13 5284241 5284420 -114999892 + (CA)n Simple_repeat Simple_repeat 1 179 0 3 625 26 0 0 0 chr13 5284702 5284728 -114999584 + AT_rich Low_complexity Low_complexity 1 26 0 3 625 24 53 0 0 chr13 5284960 5284998 -114999314 + AT_rich Low_complexity Low_complexity 1 38 0 3 625 40 21 0 0 chr13 5285171 5285218 -114999094 + AT_rich Low_complexity Low_complexity 1 47 0 3 625 233 250 0 70 chr13 5285748 5285834 -114998478 - Charlie1a DNA MER1_type -846 609 530 3 625 22 35 0 0 chr13 5287167 5287196 -114997116 + AT_rich Low_complexity Low_complexity 1 29 0 3 625 2060 216 38 0 chr13 5287866 5288342 -114995970 + Lx9 LINE L1 6791 7284 -360 3 625 808 256 71 89 chr13 5288499 5288880 -114995432 - MTE2a LTR MaLR -3 376 3 3 625 209 33 33 0 chr13 5289944 5289974 -114994338 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 3 625 1107 58 0 0 chr13 5290041 5290197 -114994115 + (TG)n Simple_repeat Simple_repeat 2 157 0 3 625 489 219 10 0 chr13 5290219 5290315 -114993997 - RSINE1 SINE B4 -43 122 26 3 625 295 355 56 120 chr13 5291470 5291568 -114992744 - B4A SINE B4 -56 236 132 3 625 680 78 0 19 chr13 5291568 5291672 -114992640 - L1_Mus2 LINE L1 -1 6565 6464 3 625 295 355 56 120 chr13 5291672 5291823 -114992489 - B4A SINE B4 -161 131 3 3 625 319 262 134 39 chr13 5293143 5293270 -114991042 + L1MEc LINE L1 39 177 -6223 3 625 236 254 0 0 chr13 5293492 5293563 -114990749 + L1M3 LINE L1 5506 5576 -595 3 625 482 0 17 0 chr13 5293761 5293819 -114990493 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 3 625 737 305 18 22 chr13 5295012 5295240 -114989072 + B4 SINE B4 60 286 -6 3 625 661 237 154 5 chr13 5295423 5295618 -114988694 - URR1B DNA MER1_type -1 224 1 3 625 192 97 0 0 chr13 5295684 5295715 -114988597 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 625 258 256 12 0 chr13 5295769 5295851 -114988461 + Lx8 LINE L1 7390 7472 -1 3 625 417 345 7 0 chr13 5295896 5296035 -114988277 + MLT1A LTR MaLR 233 372 -2 3 625 468 0 0 0 chr13 5296867 5296919 -114987393 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 625 627 360 78 0 chr13 5296948 5297206 -114987106 - B4A SINE B4 -6 286 9 3 625 23 33 0 0 chr13 5297336 5297366 -114986946 + AT_rich Low_complexity Low_complexity 1 30 0 3 625 390 209 218 5 chr13 5298654 5298784 -114985528 - Lx9 LINE L1 -6 7638 7479 3 625 228 67 0 0 chr13 5298784 5298814 -114985498 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 625 390 209 218 5 chr13 5298814 5298871 -114985441 - Lx9 LINE L1 -166 7478 7412 3 625 470 329 24 108 chr13 5299147 5299528 -114984784 - MLT1B LTR MaLR -8 382 34 3 625 1540 48 0 0 chr13 5299664 5299850 -114984462 - B2_Mm1t SINE B2 -7 186 1 3 625 278 148 0 18 chr13 5301420 5301475 -114982837 + GA-rich Low_complexity Low_complexity 3 56 0 3 625 1398 221 81 31 chr13 5302940 5303237 -114981075 - Lx9 LINE L1 -24 7620 7317 3 625 271 0 0 49 chr13 5303237 5303278 -114981034 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 625 1398 221 81 31 chr13 5303278 5303438 -114980874 - Lx9 LINE L1 -328 7316 7141 3 625 31 0 0 0 chr13 5303438 5303469 -114980843 + AT_rich Low_complexity Low_complexity 1 31 0 3 625 2210 254 127 87 chr13 5303469 5304016 -114980296 - Lx9 LINE L1 -844 6800 6276 3 625 4407 69 5 0 chr13 5304016 5304592 -114979720 + L1_Mus1 LINE L1 5988 6566 -1 3 625 2210 231 60 42 chr13 5304592 5305450 -114978862 - Lx9 LINE L1 -1369 6275 5318 3 625 815 304 42 26 chr13 5306397 5306661 -114977651 + B4 SINE B4 2 269 -23 3 625 441 0 0 0 chr13 5306671 5306720 -114977592 + (GA)n Simple_repeat Simple_repeat 1 49 0 3 625 774 60 0 25 chr13 5306720 5306840 -114977472 + (GAA)n Simple_repeat Simple_repeat 3 119 0 3 625 227 292 15 0 chr13 5306920 5306985 -114977327 - ID2 SINE ID -16 67 2 3 625 322 322 117 17 chr13 5308932 5309112 -114975200 + MER34A1 LTR ERV1 53 250 -337 3 625 377 322 35 9 chr13 5310280 5310396 -114973916 + B3A SINE B2 2 120 -78 4 625 743 280 55 0 chr13 5313615 5313815 -114970497 - ID_B1 SINE B4 -11 213 3 4 625 250 274 0 0 chr13 5314745 5314807 -114969505 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 625 253 347 26 13 chr13 5315071 5315147 -114969165 - ID2 SINE ID -3 80 4 4 625 217 358 0 31 chr13 5315942 5316040 -114968272 + PB1D10 SINE Alu 23 117 0 4 625 253 385 50 70 chr13 5316045 5316194 -114968118 + B3A SINE B2 2 147 -51 4 625 354 23 0 0 chr13 5316194 5316237 -114968075 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 625 253 385 50 70 chr13 5316237 5316288 -114968024 + B3A SINE B2 148 198 0 4 625 289 299 15 81 chr13 5316753 5316869 -114967443 - B1F SINE Alu -6 114 3 4 625 555 289 7 40 chr13 5316869 5316956 -114967356 - ID SINE ID -141 83 2 4 625 621 49 0 0 chr13 5318658 5318739 -114965573 + (TG)n Simple_repeat Simple_repeat 1 81 0 4 625 314 246 0 0 chr13 5319368 5319433 -114964879 + B4A SINE B4 14 78 -214 4 625 21 0 0 0 chr13 5319551 5319572 -114964740 + AT_rich Low_complexity Low_complexity 1 21 0 4 625 468 0 0 0 chr13 5319682 5319734 -114964578 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 625 191 395 0 0 chr13 5319865 5319941 -114964371 + L2a LINE L2 3351 3426 0 4 625 4476 142 29 1 chr13 5321159 5321876 -114962436 - RMER19A LTR ERVK 0 737 1 4 625 999 229 19 147 chr13 5322189 5322619 -114961693 + ORR1C1 LTR MaLR 1 375 -3 4 625 468 0 0 0 chr13 5323013 5323065 -114961247 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 625 519 380 10 5 chr13 5323130 5323339 -114960973 + B4A SINE B4 6 215 -77 4 625 226 157 70 35 chr13 5323477 5323563 -114960749 + (TCTA)n Simple_repeat Simple_repeat 1 89 0 4 625 3007 75 15 0 chr13 5323804 5324204 -114960108 + L1_Mus1 LINE L1 6161 6566 -1 4 625 863 267 18 92 chr13 5324242 5324745 -114959567 - L1_Rod LINE L1 -1758 4089 3624 4 625 441 0 0 0 chr13 5324746 5324795 -114959517 + (CAAAA)n Simple_repeat Simple_repeat 5 53 0 4 625 217 274 0 0 chr13 5327021 5327094 -114957218 + (TCTG)n Simple_repeat Simple_repeat 2 74 0 4 625 401 89 0 15 chr13 5327104 5327172 -114957140 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 625 401 235 12 12 chr13 5327212 5327294 -114957018 - B4A SINE B4 -4 288 207 4 625 498 267 56 129 chr13 5327319 5327551 -114956761 - B3 SINE B2 -1 215 1 4 625 1660 254 49 3 chr13 5327647 5328034 -114956278 - MTD LTR MaLR -14 405 1 4 625 525 135 0 0 chr13 5328452 5328541 -114955771 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 625 1323 91 11 0 chr13 5328545 5328721 -114955591 + B2_Mm1t SINE B2 2 179 -14 4 625 494 115 319 0 chr13 5328809 5328922 -114955390 + B2_Mm2 SINE B2 47 195 0 4 625 1147 245 142 66 chr13 5328990 5329064 -114955248 + RMER10A LTR ERVL 2 55 -387 4 625 2830 75 37 8 chr13 5329064 5329466 -114954846 - L1_Mus1 LINE L1 0 6567 6154 4 625 1147 245 142 66 chr13 5329466 5329798 -114954514 + RMER10A LTR ERVL 56 438 -4 4 625 1026 302 77 21 chr13 5330201 5330539 -114953773 - MTD LTR MaLR -60 359 3 4 625 476 184 92 0 chr13 5330762 5330871 -114953441 - L1Md_F LINE L1 -5997 522 404 4 625 2840 43 132 0 chr13 5330869 5331515 -114952797 + L1Md_F2 LINE L1 5851 6581 -1 4 625 6063 39 3 1 chr13 5331578 5332345 -114951967 - L1Md_F2 LINE L1 -92 6490 5736 4 625 346 276 58 33 chr13 5334972 5335092 -114949220 - B1F SINE Alu -15 134 12 4 625 693 303 125 44 chr13 5336033 5336416 -114947896 - MTD LTR MaLR -1 418 5 4 625 239 319 28 0 chr13 5336507 5336579 -114947733 + LTR81C LTR ERV1? 79 152 -1001 4 625 196 104 0 59 chr13 5336906 5336957 -114947355 + A-rich Low_complexity Low_complexity 3 50 0 4 625 228 67 0 0 chr13 5336970 5337000 -114947312 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 625 195 129 0 0 chr13 5337161 5337192 -114947120 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 625 246 125 0 0 chr13 5338113 5338161 -114946151 + (CAT)n Simple_repeat Simple_repeat 2 49 0 4 625 3470 192 49 31 chr13 5338161 5338870 -114945442 - Lx4A LINE L1 -14 7044 6323 4 625 4727 161 157 11 chr13 5338868 5339919 -114944393 - L1_Mur2 LINE L1 -535 5342 4138 4 625 5277 146 64 28 chr13 5339916 5340969 -114943343 - L1_Mur2 LINE L1 -3340 2537 1447 4 625 2182 183 62 21 chr13 5341103 5341539 -114942773 - Lx2B LINE L1 -2 6998 6545 4 625 210 325 0 55 chr13 5342427 5342554 -114941758 + GA-rich Low_complexity Low_complexity 4 123 0 4 625 578 353 15 31 chr13 5342558 5342754 -114941558 + B3A SINE B2 1 193 -5 4 625 272 257 29 29 chr13 5342842 5342946 -114941366 + ERVL-E-int LTR ERVL 243 346 -5321 4 625 633 247 64 42 chr13 5343048 5343342 -114940970 - Lx4B LINE L1 -7 7051 6661 4 625 189 0 0 0 chr13 5343342 5343363 -114940949 + (T)n Simple_repeat Simple_repeat 1 21 0 4 625 315 85 0 0 chr13 5343386 5343433 -114940879 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 4 625 333 139 35 11 chr13 5344288 5344375 -114939937 - L1Md_F2 LINE L1 -3 6579 6491 4 625 644 293 76 12 chr13 5344391 5344640 -114939672 - Lx8 LINE L1 -2 7471 7207 4 625 30 59 0 0 chr13 5344647 5344698 -114939614 + AT_rich Low_complexity Low_complexity 1 51 0 4 625 573 142 0 0 chr13 5346245 5346372 -114937940 + (GA)n Simple_repeat Simple_repeat 2 128 0 4 625 270 0 291 0 chr13 5346372 5346482 -114937830 + (CAGG)n Simple_repeat Simple_repeat 1 142 0 4 625 336 185 0 0 chr13 5346486 5346594 -114937718 + (CA)n Simple_repeat Simple_repeat 1 108 0 4 625 680 61 0 0 chr13 5346706 5346804 -114937508 - L1_Mus1 LINE L1 0 6567 6470 4 625 294 106 0 0 chr13 5347167 5347214 -114937098 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 625 22 103 0 0 chr13 5348011 5348089 -114936223 + AT_rich Low_complexity Low_complexity 1 78 0 4 625 7674 85 20 2 chr13 5348330 5349613 -114934699 - L1_Mus3 LINE L1 -2 6636 5332 4 625 1886 151 25 3 chr13 5349960 5350279 -114934033 + ORR1A3 LTR MaLR 1 326 0 4 625 561 105 0 0 chr13 5350319 5350405 -114933907 + (TG)n Simple_repeat Simple_repeat 2 87 0 4 625 1723 164 51 6 chr13 5350423 5350736 -114933576 - ORR1A2 LTR MaLR 0 327 1 4 625 272 275 14 28 chr13 5350782 5350853 -114933459 - B4A SINE B4 -72 220 151 4 625 587 301 86 25 chr13 5351047 5351245 -114933067 + B3 SINE B2 1 210 -6 4 625 192 200 0 0 chr13 5351330 5351375 -114932937 + (TCTG)n Simple_repeat Simple_repeat 1 45 0 4 625 462 88 0 0 chr13 5351658 5351726 -114932586 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 625 562 323 82 26 chr13 5351759 5352026 -114932286 - B4A SINE B4 -9 283 2 4 625 22 70 0 0 chr13 5352194 5352237 -114932075 + AT_rich Low_complexity Low_complexity 1 43 0 4 625 7322 96 33 3 chr13 5352713 5354342 -114929970 - L1Md_F LINE L1 -3645 2238 559 4 625 22 56 0 0 chr13 5354382 5354418 -114929894 + AT_rich Low_complexity Low_complexity 1 36 0 4 625 1378 173 60 13 chr13 5355203 5355502 -114928810 - L1_Mur3 LINE L1 -3071 2809 2497 4 625 829 233 32 5 chr13 5356213 5356403 -114927909 - Lx6 LINE L1 -661 6799 6605 4 625 2899 241 60 3 chr13 5356398 5357048 -114927264 + Lx6 LINE L1 6770 7456 -4 4 625 655 166 108 22 chr13 5357669 5357854 -114926458 - Lx9 LINE L1 0 7644 7444 4 625 191 88 0 29 chr13 5358285 5358320 -114925992 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 4 625 5301 204 46 16 chr13 5358348 5359437 -114924875 - Lx5 LINE L1 -3 7047 5926 4 625 2286 93 95 14 chr13 5359437 5359796 -114924516 - MTB LTR MaLR -12 388 1 4 625 1858 117 50 26 chr13 5359796 5360138 -114924174 - MTB-int LTR MaLR 0 1098 749 4 625 2383 186 129 91 chr13 5360100 5360796 -114923516 + RLTR25A LTR ERVK 381 1103 0 4 625 4788 171 37 31 chr13 5360799 5361827 -114922485 + L1_Mur2 LINE L1 2441 3474 -2403 4 625 1514 52 0 35 chr13 5362323 5362522 -114921790 - B2_Mm1a SINE B2 0 193 2 4 625 838 152 14 0 chr13 5362587 5362725 -114921587 + B1_Mur4 SINE Alu 1 140 -10 4 625 501 17 0 0 chr13 5362725 5362783 -114921529 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 625 209 91 45 0 chr13 5362783 5362827 -114921485 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 4 625 689 297 12 25 chr13 5362892 5363054 -114921258 + RSINE1 SINE B4 6 165 0 4 625 419 319 26 8 chr13 5363373 5363490 -114920822 + B3A SINE B2 3 121 -77 4 625 389 302 96 51 chr13 5363640 5363797 -114920515 - B4 SINE B4 -127 165 2 4 625 306 50 0 0 chr13 5365152 5365192 -114919120 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 625 490 332 29 54 chr13 5365321 5365563 -114918749 - B4A SINE B4 0 292 57 4 625 274 275 176 59 chr13 5365657 5365827 -114918485 - B3A SINE B2 -7 191 2 4 625 27 29 0 0 chr13 5365901 5365935 -114918377 + AT_rich Low_complexity Low_complexity 1 34 0 4 625 278 218 51 0 chr13 5366156 5366234 -114918078 - RMER1C Other Other -1 1341 1260 4 625 481 315 134 26 chr13 5366173 5366515 -114917797 - Lx8 LINE L1 0 7473 7095 4 625 239 317 9 2 chr13 5367888 5367973 -114916339 - BC1_Mm scRNA scRNA -63 89 2 4 625 207 204 0 0 chr13 5368178 5368222 -114916090 + CT-rich Low_complexity Low_complexity 3 46 0 4 625 699 139 0 0 chr13 5368313 5368428 -114915884 + (TTTC)n Simple_repeat Simple_repeat 3 117 0 4 625 378 0 0 0 chr13 5368557 5368599 -114915713 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 625 24 85 0 0 chr13 5368618 5368677 -114915635 + AT_rich Low_complexity Low_complexity 1 59 0 4 625 623 52 0 0 chr13 5369841 5369918 -114914394 + L1Md_F LINE L1 295 371 -6148 4 625 2611 94 5 60 chr13 5369926 5370356 -114913956 + L1Md_F2 LINE L1 6165 6570 -12 5 625 1453 149 11 44 chr13 5370380 5370653 -114913659 + Lx3B LINE L1 6710 6973 0 5 625 27 29 0 0 chr13 5370654 5370688 -114913624 + AT_rich Low_complexity Low_complexity 1 34 0 5 625 278 324 14 0 chr13 5371325 5371399 -114912913 + ID4 SINE ID 9 83 0 5 625 479 297 39 49 chr13 5371456 5371614 -114912698 - RSINE1 SINE B4 -9 156 3 5 625 276 353 35 0 chr13 5373661 5373777 -114910535 + ID_B1 SINE B4 84 203 -21 5 625 441 0 0 0 chr13 5373785 5373834 -114910478 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 626 348 396 6 19 chr13 5374494 5374651 -114909661 - RSINE1 SINE B4 0 165 11 5 626 286 325 25 33 chr13 5375488 5375609 -114908703 + RMER12 LTR ERVK 731 850 -472 5 626 4724 32 2 0 chr13 5375670 5376228 -114908084 + L1Md_T LINE L1 6024 6582 0 5 626 22 0 0 0 chr13 5376446 5376468 -114907844 + AT_rich Low_complexity Low_complexity 1 22 0 5 626 793 341 38 78 chr13 5376469 5376864 -114907448 - MTEa LTR MaLR 0 379 1 5 626 288 284 18 27 chr13 5376864 5376961 -114907351 - MLT2B4 LTR ERVL -456 100 5 5 626 243 0 0 0 chr13 5377442 5377469 -114906843 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 626 252 329 0 66 chr13 5377469 5377560 -114906752 - PB1D10 SINE Alu -11 106 22 5 626 562 316 12 6 chr13 5377854 5378023 -114906289 - MER58A DNA MER1_type 0 224 55 5 626 3761 81 0 8 chr13 5378023 5378535 -114905777 - L1Md_F2 LINE L1 -7 6575 6068 5 626 33573 59 1 10 chr13 5378535 5379352 -114904960 - L1Md_F2 LINE L1 -125 6457 5642 5 626 5946 82 82 0 chr13 5379352 5380177 -114904135 + RLTR13B1 LTR ERVK 1 893 0 5 626 33573 87 13 6 chr13 5380177 5385410 -114898902 - L1Md_F2 LINE L1 -242 5641 371 5 626 324 0 0 0 chr13 5385773 5385809 -114898503 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 626 2441 151 4 61 chr13 5386156 5386628 -114897684 - RMER6B LTR ERVK -16 445 1 5 626 873 78 7 21 chr13 5388464 5388607 -114895705 - L1Md_F2 LINE L1 0 6582 6442 5 626 803 112 0 82 chr13 5388689 5388884 -114895428 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 626 492 185 0 0 chr13 5388903 5389011 -114895301 + (CA)n Simple_repeat Simple_repeat 2 109 0 5 626 342 0 0 0 chr13 5389172 5389210 -114895102 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 626 3441 18 2 2 chr13 5389241 5389637 -114894675 + MTA_Mm LTR MaLR 1 396 0 5 626 1167 76 0 6 chr13 5389831 5390002 -114894310 + L1Md_F2 LINE L1 6412 6581 -1 5 626 240 200 0 0 chr13 5390659 5390709 -114893603 + (CAT)n Simple_repeat Simple_repeat 2 51 0 5 626 289 266 264 8 chr13 5390728 5390857 -114893455 - Lx8 LINE L1 -172 7301 7140 5 626 430 16 48 0 chr13 5392133 5392196 -114892116 - L1Md_F2 LINE L1 0 6582 6517 5 626 285 29 0 0 chr13 5392290 5392324 -114891988 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 626 414 292 99 33 chr13 5392442 5392594 -114891718 + B4A SINE B4 109 270 -22 5 626 894 249 84 30 chr13 5393722 5394091 -114890221 - Lx9 LINE L1 -8 7636 7248 5 626 337 360 8 8 chr13 5394667 5394793 -114889519 - RSINE1 SINE B4 -36 129 4 5 626 351 0 0 0 chr13 5395907 5395946 -114888366 + (GA)n Simple_repeat Simple_repeat 1 39 0 5 626 367 301 8 1 chr13 5396750 5396839 -114887473 + B4 SINE B4 2 96 -69 5 626 228 269 0 0 chr13 5396840 5396944 -114887368 + GA-rich Low_complexity Low_complexity 1 104 0 5 626 225 325 0 48 chr13 5396978 5397062 -114887250 + B4 SINE B4 82 161 -131 5 626 603 295 194 20 chr13 5397219 5397565 -114886747 + MLT1C LTR MaLR 60 465 -2 5 626 525 92 0 0 chr13 5398743 5398819 -114885493 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 626 865 224 56 0 chr13 5398860 5399039 -114885273 + B3 SINE B2 5 193 -23 5 626 244 244 228 13 chr13 5399886 5399965 -114884347 - L2b LINE L2 -8 3367 3272 5 626 344 329 64 32 chr13 5400148 5400305 -114884007 + B4A SINE B4 129 290 -2 5 626 201 121 0 0 chr13 5400320 5400353 -114883959 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 626 415 162 10 10 chr13 5400693 5400793 -114883519 + (TA)n Simple_repeat Simple_repeat 1 100 0 5 626 218 182 54 18 chr13 5401211 5401267 -114883045 + T-rich Low_complexity Low_complexity 1 58 0 5 626 1309 258 208 4 chr13 5401283 5401753 -114882559 - Lx9 LINE L1 -32 7612 7048 5 626 1358 232 66 59 chr13 5401753 5402161 -114882151 + MTD LTR MaLR 1 411 -8 5 626 536 137 10 0 chr13 5402918 5403020 -114881292 + (CA)n Simple_repeat Simple_repeat 2 104 0 5 626 339 260 0 13 chr13 5403035 5403113 -114881199 - B4A SINE B4 -213 79 3 5 626 778 120 96 27 chr13 5403513 5403659 -114880653 - RMER17B LTR ERVK -10 948 793 5 626 416 51 17 0 chr13 5404261 5404320 -114879992 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 626 432 0 0 0 chr13 5406165 5406213 -114878099 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 626 454 345 9 121 chr13 5406256 5406579 -114877733 - B4 SINE B4 -5 287 1 5 626 4001 126 0 30 chr13 5406594 5407232 -114877080 - Lx LINE L1 -1 6653 6035 5 626 963 146 25 45 chr13 5407249 5407450 -114876862 + L1_Mm LINE L1 4485 4681 -1202 5 626 3945 146 8 86 chr13 5408989 5409858 -114874454 + L1_Mm LINE L1 3064 3864 -2019 5 626 843 332 18 34 chr13 5410038 5410365 -114873947 - MTE2a LTR MaLR -55 324 3 5 626 251 85 0 21 chr13 5410699 5410747 -114873565 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 626 1045 31 0 0 chr13 5410761 5410888 -114873424 - B1_Mm SINE Alu -5 142 16 5 626 1092 100 0 27 chr13 5410979 5411164 -114873148 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 626 236 211 86 17 chr13 5412273 5412331 -114871981 - Lx3A LINE L1 -983 5998 5937 5 626 6536 86 59 15 chr13 5412331 5413326 -114870986 + Lx3_Mus LINE L1 5966 7004 -5 5 626 204 83 62 0 chr13 5414797 5414845 -114869467 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 5 626 813 258 26 56 chr13 5415516 5415750 -114868562 + Lx6 LINE L1 6997 7223 -237 5 626 259 91 0 22 chr13 5415753 5415798 -114868514 - B1_Mur4 SINE Alu 0 150 107 5 626 195 146 0 0 chr13 5415837 5415878 -114868434 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 5 626 297 0 0 0 chr13 5415884 5415917 -114868395 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 5 626 248 352 39 0 chr13 5415955 5416083 -114868229 + Lx7 LINE L1 7189 7321 -375 5 626 263 216 10 49 chr13 5416140 5416242 -114868070 + T-rich Low_complexity Low_complexity 2 99 0 5 626 27 49 0 0 chr13 5416341 5416382 -114867930 + AT_rich Low_complexity Low_complexity 1 41 0 5 626 510 17 0 0 chr13 5416563 5416622 -114867690 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 626 41 21 0 0 chr13 5416722 5416770 -114867542 + AT_rich Low_complexity Low_complexity 1 48 0 5 626 305 341 40 8 chr13 5416997 5417121 -114867191 - RSINE1 SINE B4 -36 129 2 5 626 23 33 0 0 chr13 5417284 5417314 -114866998 + AT_rich Low_complexity Low_complexity 1 30 0 5 626 224 349 101 20 chr13 5417718 5417867 -114866445 - L4 LINE RTE -1057 972 812 5 626 5123 73 0 31 chr13 5418713 5419423 -114864889 - L1_Mus2 LINE L1 0 6566 5879 5 626 22 0 0 0 chr13 5420169 5420191 -114864121 + AT_rich Low_complexity Low_complexity 1 22 0 5 626 228 143 0 0 chr13 5420256 5420298 -114864014 + (A)n Simple_repeat Simple_repeat 1 42 0 5 626 202 237 101 38 chr13 5420714 5420793 -114863519 - MIRm SINE MIR -111 165 82 5 626 598 319 15 20 chr13 5421183 5421378 -114862934 + B4A SINE B4 5 198 -94 5 626 216 97 0 0 chr13 5421443 5421474 -114862838 + (T)n Simple_repeat Simple_repeat 1 31 0 5 626 258 176 59 129 chr13 5421608 5421676 -114862636 + B4A SINE B4 214 280 -12 5 626 405 0 0 0 chr13 5421676 5421721 -114862591 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 5 626 258 176 59 129 chr13 5421721 5421737 -114862575 + B4A SINE B4 281 292 0 5 626 408 212 0 0 chr13 5421738 5421870 -114862442 + (CA)n Simple_repeat Simple_repeat 2 133 0 5 626 354 138 15 30 chr13 5421870 5421937 -114862375 + HAL1-3A_ME LINE L1 1976 2041 -817 5 626 559 256 25 31 chr13 5422998 5423159 -114861153 + RMER15-int LTR ERVL 2240 2399 -2600 5 626 2468 246 87 11 chr13 5423244 5423970 -114860342 + RMER15-int LTR ERVL 4155 4935 -64 5 626 326 250 12 23 chr13 5423972 5424058 -114860254 + RMER15 LTR ERVL 107 191 -384 5 626 22 35 0 0 chr13 5425863 5425892 -114858420 + AT_rich Low_complexity Low_complexity 1 29 0 5 626 567 78 0 0 chr13 5425946 5426023 -114858289 + (TA)n Simple_repeat Simple_repeat 2 78 0 5 626 593 301 15 5 chr13 5426038 5426235 -114858077 - Lx9 LINE L1 -182 7462 7264 5 626 703 209 36 12 chr13 5426232 5426397 -114857915 + Lx9 LINE L1 7099 7267 -377 5 626 775 232 61 15 chr13 5426431 5426628 -114857684 - B3 SINE B2 -10 206 1 5 626 972 295 122 0 chr13 5427122 5427458 -114856854 + MTE2a LTR MaLR 1 377 -2 5 626 22 0 0 0 chr13 5427894 5427916 -114856396 + AT_rich Low_complexity Low_complexity 1 22 0 5 626 556 337 16 11 chr13 5428148 5428334 -114855978 + B4A SINE B4 106 292 0 5 626 1288 111 11 0 chr13 5428850 5429040 -114855272 + B2_Mm1t SINE B2 1 192 -1 5 626 336 304 78 0 chr13 5429458 5429573 -114854739 + MER5A1 DNA MER1_type 33 156 -10 5 626 785 220 8 0 chr13 5431488 5431620 -114852692 + ETnERV2-int LTR ERVK 7070 7202 -204 5 626 463 318 88 22 chr13 5432036 5432341 -114851971 - L1MA4 LINE L1 -281 6019 5696 5 626 236 280 55 23 chr13 5435299 5435427 -114848885 + MTEa LTR MaLR 246 377 -2 5 626 477 0 0 0 chr13 5438133 5438186 -114846126 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 626 24 67 0 0 chr13 5439300 5439345 -114844967 + AT_rich Low_complexity Low_complexity 1 45 0 5 626 530 93 12 0 chr13 5439568 5439654 -114844658 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 626 1421 191 167 35 chr13 5439657 5440004 -114844308 - RLTR9C LTR ERVK 0 393 1 6 626 462 345 76 35 chr13 5440057 5440228 -114844084 - B3A SINE B2 -15 183 6 6 626 422 316 69 83 chr13 5441349 5442119 -114842193 + HAL1 LINE L1 843 1601 -906 6 626 201 348 43 11 chr13 5443039 5443132 -114841180 - MIRb SINE MIR -142 126 31 6 626 8732 14 6 2 chr13 5445158 5446222 -114838090 - L1Md_A LINE L1 0 6582 5516 6 626 567 0 0 0 chr13 5447690 5447753 -114836559 + (TC)n Simple_repeat Simple_repeat 2 64 0 6 626 342 0 0 0 chr13 5447754 5447792 -114836520 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 626 1024 50 58 0 chr13 5448453 5448592 -114835720 + B1_Mus2 SINE Alu 1 147 0 6 626 248 137 0 19 chr13 5448800 5448852 -114835460 + CT-rich Low_complexity Low_complexity 2 52 0 6 626 2869 229 53 12 chr13 5449832 5450433 -114833879 - Lx5 LINE L1 -3 7047 6422 6 626 471 330 0 0 chr13 5452070 5452185 -114832127 + RSINE1 SINE B4 27 141 -24 6 626 400 325 98 20 chr13 5452471 5452716 -114831596 - Lx8 LINE L1 -23 7450 7187 6 626 225 65 0 0 chr13 5453292 5453323 -114830989 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 626 2923 132 47 18 chr13 5453323 5453818 -114830494 - Lx3_Mus LINE L1 -21 6988 6480 6 626 2655 117 0 137 chr13 5453818 5454322 -114829990 + RLTR10C LTR ERVK 1 435 -1 6 626 5106 109 123 2 chr13 5454322 5455140 -114829172 + MMERVK10C-int LTR ERVK 3 919 -6662 6 626 461 133 38 9 chr13 5455173 5455279 -114829033 + MMERVK10C-int LTR ERVK 844 952 -6629 6 626 1135 170 61 10 chr13 5455371 5455579 -114828733 + RMER16-int LTR ERVK 312 525 -4881 6 626 273 29 0 0 chr13 5455579 5455613 -114828699 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 6 626 703 257 196 24 chr13 5455613 5455837 -114828475 + RMER16-int LTR ERVK 394 667 -5470 6 626 20579 80 6 3 chr13 5456512 5459535 -114824777 + MMERVK10C-int LTR ERVK 4623 7679 -1 6 626 2710 116 0 136 chr13 5459537 5460038 -114824274 + RLTR10C LTR ERVK 1 433 -3 6 626 2025 92 11 3 chr13 5460038 5460321 -114823991 - Lx3_Mus LINE L1 -524 6485 6201 6 626 9542 91 42 9 chr13 5460318 5461133 -114823179 + L1_Mur1 LINE L1 2041 2874 -3012 6 626 363 44 0 0 chr13 5461133 5461178 -114823134 + (GA)n Simple_repeat Simple_repeat 2 46 0 6 626 9542 91 42 9 chr13 5461178 5461804 -114822508 + L1_Mur1 LINE L1 2875 3529 -2357 6 626 409 105 0 84 chr13 5462064 5462147 -114822165 - L1_Mur1 LINE L1 -2279 3607 3532 6 626 998 257 240 4 chr13 5462146 5462636 -114821676 + Lx6 LINE L1 6837 7440 -20 6 626 7011 167 92 13 chr13 5462658 5462942 -114821370 - Lx4A LINE L1 -16 7042 6764 6 626 180 0 0 0 chr13 5462942 5462962 -114821350 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 626 9649 155 78 19 chr13 5462962 5465593 -114818719 - Lx4A LINE L1 -295 6763 3924 6 626 2253 192 4 53 chr13 5465591 5466063 -114818249 - Lx4A LINE L1 -5960 1126 678 6 626 247 370 0 0 chr13 5466253 5466326 -114817986 + ID4 SINE ID 2 74 -9 6 626 225 329 113 47 chr13 5466638 5466788 -114817524 - MTEa LTR MaLR -13 366 207 6 626 783 257 28 19 chr13 5467590 5467804 -114816508 + B3 SINE B2 1 216 0 6 626 378 0 0 0 chr13 5468809 5468851 -114815461 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 626 764 114 48 16 chr13 5469168 5469293 -114815019 + BC1_Mm scRNA scRNA 1 129 -23 6 626 405 296 144 42 chr13 5469333 5469597 -114814715 + B4A SINE B4 2 292 0 6 626 588 29 0 0 chr13 5469728 5469798 -114814514 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 626 569 302 31 0 chr13 5470398 5470527 -114813785 + B4 SINE B4 156 288 -4 6 626 422 322 82 29 chr13 5470990 5471271 -114813041 + L1MC LINE L1 3796 4091 -2055 6 626 259 257 72 55 chr13 5471272 5471453 -114812859 + L1MC2 LINE L1 6051 6234 -110 6 626 401 175 10 0 chr13 5471603 5471706 -114812606 + GA-rich Low_complexity Low_complexity 1 104 0 6 626 494 326 36 20 chr13 5471711 5471969 -114812343 - L1_Mur3 LINE L1 -174 5706 5471 6 626 846 61 0 0 chr13 5471972 5472086 -114812226 - B1_Mus2 SINE Alu 0 147 34 6 626 438 195 0 0 chr13 5472414 5472496 -114811816 - RMER19C LTR ERVK 0 611 530 6 626 2055 106 3 3 chr13 5472499 5472794 -114811518 + ORR1A2 LTR MaLR 1 295 -32 6 626 310 28 0 0 chr13 5472794 5472830 -114811482 + Lx2A LINE L1 6725 6760 -248 6 626 631 313 79 20 chr13 5473514 5473864 -114810448 + MLT1B LTR MaLR 9 390 0 6 626 446 285 72 89 chr13 5474083 5474318 -114809994 + ORR1E LTR MaLR 32 262 -97 6 626 314 95 0 0 chr13 5474502 5474544 -114809768 + L1_Mus3 LINE L1 6135 6176 -462 6 626 2099 101 50 9 chr13 5474919 5475239 -114809073 - Lx LINE L1 -1 6653 6321 6 626 201 39 0 0 chr13 5475760 5475786 -114808526 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 626 922 176 82 0 chr13 5476676 5476858 -114807454 + URR1A DNA MER1_type 12 208 -18 6 626 7269 128 64 11 chr13 5477128 5478323 -114805989 - Lx3C LINE L1 -2 6974 5716 6 626 2734 198 76 11 chr13 5478318 5479153 -114805159 - L1_Mur1 LINE L1 -4449 1437 569 6 626 2329 116 108 0 chr13 5480144 5480523 -114803789 + RLTR9B2 LTR ERVK 1 420 0 6 626 210 250 27 40 chr13 5481108 5481183 -114803129 + CT-rich Low_complexity Low_complexity 3 76 0 6 626 465 34 0 0 chr13 5481423 5481482 -114802830 + (GAAA)n Simple_repeat Simple_repeat 3 61 0 6 626 198 0 0 0 chr13 5481482 5481504 -114802808 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 6 626 7721 164 26 29 chr13 5481635 5483181 -114801131 - Lx4A LINE L1 -679 5198 3657 6 626 8440 155 31 9 chr13 5483163 5484827 -114799485 + Lx4A LINE L1 5352 7057 -1 6 626 21 0 0 0 chr13 5484827 5484848 -114799464 + AT_rich Low_complexity Low_complexity 1 21 0 6 626 7507 86 4 0 chr13 5485348 5486396 -114797916 + L1Md_F2 LINE L1 2867 3918 -1965 6 626 8014 35 0 0 chr13 5486395 5487933 -114796379 - L1Md_T LINE L1 0 6582 5045 6 626 12335 76 8 1 chr13 5487931 5489602 -114794710 + L1Md_F2 LINE L1 3904 5586 -297 6 626 7435 77 5 5 chr13 5489603 5490598 -114793714 + L1Md_F2 LINE L1 5588 6582 0 6 626 1159 314 70 16 chr13 5490755 5491373 -114792939 - L1MB3 LINE L1 -28 6155 5505 6 626 362 309 40 52 chr13 5491535 5491935 -114792377 + L1M5 LINE L1 3340 3731 -2415 6 626 213 218 0 0 chr13 5492656 5492734 -114791578 + (TG)n Simple_repeat Simple_repeat 2 79 0 6 626 532 222 0 32 chr13 5492749 5492935 -114791377 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 626 233 227 0 43 chr13 5492936 5493005 -114791307 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 6 626 587 228 0 6 chr13 5493006 5493187 -114791125 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 626 236 274 32 16 chr13 5493191 5493317 -114790995 + (TA)n Simple_repeat Simple_repeat 1 128 0 6 626 28 48 0 0 chr13 5494085 5494127 -114790185 + AT_rich Low_complexity Low_complexity 1 42 0 6 626 1007 112 6 18 chr13 5494659 5494823 -114789489 + L1_Mus2 LINE L1 6405 6566 0 6 626 486 344 71 14 chr13 5496262 5496628 -114787684 + Lx9 LINE L1 7087 7473 -171 6 626 307 388 134 6 chr13 5496858 5497187 -114787125 + L1MCa LINE L1 790 1160 -5263 6 626 550 190 146 16 chr13 5497208 5497331 -114786981 + B1_Mur2 SINE Alu 11 149 0 6 626 654 13 0 0 chr13 5497375 5497450 -114786862 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 626 1158 69 0 0 chr13 5497643 5497788 -114786524 + B1_Mus1 SINE Alu 1 145 -3 6 626 344 328 33 0 chr13 5498052 5498174 -114786138 + L1MCa LINE L1 1602 1727 -5401 6 626 1196 122 351 4 chr13 5498627 5498858 -114785454 - RLTR10E LTR ERVK 0 311 1 6 626 7245 69 16 25 chr13 5498948 5500000 -114784312 - L1Md_F2 LINE L1 -14 6568 5524 6 78 32145 81 5 7 chr13 5500001 5505095 -114779217 - L1Md_A LINE L1 -361 5522 442 1 627 204 203 42 28 chr13 5505781 5505852 -114778460 + A-rich Low_complexity Low_complexity 6 77 0 2 627 27 0 0 0 chr13 5505888 5505915 -114778397 + AT_rich Low_complexity Low_complexity 1 27 0 3 627 405 0 0 0 chr13 5506486 5506531 -114777781 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 627 335 380 16 32 chr13 5506905 5507090 -114777222 - B3A SINE B2 -16 182 1 5 627 393 301 108 42 chr13 5507277 5507658 -114776654 - L1M5 LINE L1 -758 5388 4983 6 627 2405 273 60 29 chr13 5508697 5509469 -114774843 - RCHARR1 DNA MER1_type -178 796 1 7 627 207 364 166 23 chr13 5509471 5509954 -114774358 + L2 LINE L2 1411 1962 -1457 8 627 215 125 0 24 chr13 5509984 5510025 -114774287 + (GGA)n Simple_repeat Simple_repeat 3 42 0 9 627 1170 17 0 48 chr13 5510030 5510216 -114774096 + (GAA)n Simple_repeat Simple_repeat 1 177 0 1 627 198 0 0 0 chr13 5510998 5511020 -114773292 + (TTCTC)n Simple_repeat Simple_repeat 3 24 0 1 627 392 200 0 32 chr13 5511016 5511140 -114773172 + CT-rich Low_complexity Low_complexity 2 121 0 1 627 1609 30 0 10 chr13 5511886 5512088 -114772224 + L1Md_F3 LINE L1 6371 6570 -14 1 627 284 357 0 0 chr13 5513261 5513345 -114770967 + polypyrimidine Low_complexity Low_complexity 2 85 0 1 627 527 295 134 116 chr13 5513348 5513616 -114770696 - B4 SINE B4 -10 282 10 1 627 2404 85 57 74 chr13 5513869 5514287 -114770025 + RLTR10A LTR ERVK 1 411 0 1 627 239 293 61 114 chr13 5515635 5515766 -114768546 + MLT1G1 LTR MaLR 263 386 -193 1 627 190 187 43 11 chr13 5516901 5516993 -114767319 + (TG)n Simple_repeat Simple_repeat 1 95 0 1 627 1042 83 14 0 chr13 5517377 5517522 -114766790 + B1_Mm SINE Alu 1 147 0 1 627 370 53 35 0 chr13 5517523 5517580 -114766732 + (CAAAAA)n Simple_repeat Simple_repeat 3 61 0 2 627 541 269 48 86 chr13 5518146 5518333 -114765979 - B3A SINE B2 -8 187 8 2 627 29 0 0 0 chr13 5519208 5519237 -114765075 + AT_rich Low_complexity Low_complexity 1 29 0 2 627 527 85 0 12 chr13 5519531 5519614 -114764698 + (TG)n Simple_repeat Simple_repeat 2 83 0 2 627 286 329 49 0 chr13 5519626 5519708 -114764604 - RSINE1 SINE B4 -42 123 38 2 627 741 352 43 37 chr13 5520931 5521418 -114762894 + L1MCa LINE L1 239 728 -5780 2 627 319 308 173 0 chr13 5521590 5521856 -114762456 + L1MCa LINE L1 1470 1781 -4727 2 627 371 302 72 67 chr13 5522041 5522442 -114761870 - L1MC LINE L1 -2786 3360 2958 2 627 753 307 59 0 chr13 5522508 5522746 -114761566 - MTE2b LTR MaLR -127 252 1 2 627 242 196 0 0 chr13 5524011 5524057 -114760255 - L1M5 LINE L1 -461 5663 5618 2 627 254 323 125 0 chr13 5524025 5524121 -114760191 - L1MC LINE L1 -2239 5643 5536 2 627 459 0 0 0 chr13 5525325 5525376 -114758936 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 627 207 197 32 16 chr13 5525441 5525503 -114758809 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 627 342 287 209 22 chr13 5525561 5525786 -114758526 - B4A SINE B4 -24 268 2 3 627 1360 165 91 32 chr13 5526421 5526894 -114757418 + RMER6D LTR ERVK 8 690 0 3 627 24 32 0 0 chr13 5527647 5527678 -114756634 + AT_rich Low_complexity Low_complexity 1 31 0 3 627 609 63 32 0 chr13 5527795 5527890 -114756422 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 3 627 447 309 144 26 chr13 5527994 5528223 -114756089 - RMER15 LTR ERVL -12 563 308 3 627 307 213 16 0 chr13 5529106 5529167 -114755145 + B4 SINE B4 1 62 -230 3 627 212 209 30 0 chr13 5530362 5530429 -114753883 + (TTG)n Simple_repeat Simple_repeat 2 70 0 3 627 292 372 46 8 chr13 5530666 5530796 -114753516 + B1F SINE Alu 3 137 -12 3 627 30 0 0 0 chr13 5531258 5531288 -114753024 + AT_rich Low_complexity Low_complexity 1 30 0 4 627 718 339 107 40 chr13 5531897 5532098 -114752214 - Kanga11a DNA Tc2 -384 586 373 4 627 1154 74 0 0 chr13 5532098 5532246 -114752066 + B1_Mus1 SINE Alu 1 148 0 4 627 718 335 71 83 chr13 5532246 5532595 -114751717 - Kanga11a DNA Tc2 -598 372 8 4 627 428 135 27 0 chr13 5534340 5534414 -114749898 + MTC LTR MaLR 1 76 -345 4 627 859 246 55 42 chr13 5534418 5534652 -114749660 + RMER19C LTR ERVK 329 664 -238 4 627 189 0 0 0 chr13 5534652 5534673 -114749639 + (TGGGGG)n Simple_repeat Simple_repeat 2 22 0 4 627 859 250 54 39 chr13 5534673 5534726 -114749586 + RMER19C LTR ERVK 558 611 0 4 627 1636 207 12 16 chr13 5534745 5535064 -114749248 + MTC LTR MaLR 104 421 0 4 627 670 323 47 29 chr13 5535620 5535897 -114748415 + B4A SINE B4 2 283 -9 4 627 333 0 0 0 chr13 5535931 5535968 -114748344 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 627 456 335 194 0 chr13 5536217 5536451 -114747861 + MTE2b LTR MaLR 3 282 -97 4 627 537 272 0 25 chr13 5536452 5536631 -114747681 - L1M2 LINE L1 -443 5746 5572 4 627 22 0 0 0 chr13 5537200 5537222 -114747090 + AT_rich Low_complexity Low_complexity 1 22 0 5 627 647 288 79 29 chr13 5537795 5538213 -114746099 - L1MB3 LINE L1 -211 5972 5534 5 627 317 273 9 0 chr13 5538300 5538410 -114745902 - L1MB3 LINE L1 -787 5391 5281 5 627 309 250 27 14 chr13 5538957 5539030 -114745282 + PB1D10 SINE Alu 38 111 -6 5 627 281 281 0 0 chr13 5539318 5539382 -114744930 + PB1D10 SINE Alu 47 110 -7 5 627 304 303 132 14 chr13 5539439 5539583 -114744729 + HAL1-3A_ME LINE L1 2284 2444 -414 5 627 242 211 19 0 chr13 5539584 5539636 -114744676 + GA-rich Low_complexity Low_complexity 4 56 0 5 627 321 266 21 0 chr13 5540169 5540263 -114744049 + (CATATA)n Simple_repeat Simple_repeat 5 100 0 5 627 244 333 45 0 chr13 5540415 5540481 -114743831 - PB1D10 SINE Alu -47 70 2 5 627 2208 202 19 44 chr13 5541800 5542442 -114741870 - RLTR20D LTR ERVK 0 568 1 5 627 23 0 0 0 chr13 5542573 5542596 -114741716 + AT_rich Low_complexity Low_complexity 1 23 0 5 627 522 310 63 59 chr13 5543056 5543396 -114740916 - MTEb LTR MaLR -17 362 1 6 627 459 0 0 0 chr13 5543634 5543685 -114740627 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 627 451 318 33 67 chr13 5545373 5545673 -114738639 - B4A SINE B4 0 292 3 6 627 249 33 0 0 chr13 5546689 5546719 -114737593 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 627 183 42 0 0 chr13 5546807 5546831 -114737481 + (TTG)n Simple_repeat Simple_repeat 2 25 0 6 627 450 0 0 0 chr13 5547417 5547467 -114736845 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 627 261 0 0 0 chr13 5547467 5547495 -114736817 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 627 703 302 128 18 chr13 5547761 5548088 -114736224 + MLT1B LTR MaLR 1 363 -27 6 627 264 225 155 0 chr13 5548658 5548729 -114735583 - 5S rRNA rRNA -39 82 1 6 627 4442 151 118 64 chr13 5549189 5549985 -114734327 + RLTR25A LTR ERVK 1 899 -204 6 627 372 43 0 0 chr13 5549985 5550031 -114734281 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 627 4442 151 118 64 chr13 5550031 5550233 -114734079 + RLTR25A LTR ERVK 900 1060 -43 6 627 2945 83 25 0 chr13 5550233 5550628 -114733684 + MTB_Mm LTR MaLR 3 407 0 7 627 4442 151 118 64 chr13 5550628 5550675 -114733637 + RLTR25A LTR ERVK 1061 1103 0 6 627 231 289 11 22 chr13 5551083 5551175 -114733137 + (CATATA)n Simple_repeat Simple_repeat 5 95 0 7 627 370 324 9 0 chr13 5551212 5551317 -114732995 - PB1D10 SINE Alu -5 112 7 7 627 197 333 57 11 chr13 5551584 5551672 -114732640 + MIRb SINE MIR 150 241 -27 7 627 198 156 0 0 chr13 5552575 5552620 -114731692 + T-rich Low_complexity Low_complexity 1 45 0 7 627 367 174 48 7 chr13 5553306 5553451 -114730861 + (CA)n Simple_repeat Simple_repeat 2 152 0 7 627 180 179 0 0 chr13 5554456 5554495 -114729817 + (TA)n Simple_repeat Simple_repeat 2 40 0 7 627 1101 76 0 0 chr13 5554964 5555109 -114729203 + B1_Mus1 SINE Alu 1 145 -3 7 627 348 0 19 37 chr13 5555109 5555163 -114729149 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 7 627 672 271 5 67 chr13 5555207 5555401 -114728911 + B3A SINE B2 1 182 -16 8 627 424 338 87 6 chr13 5555440 5555601 -114728711 - B3 SINE B2 -38 178 5 8 627 693 262 93 16 chr13 5556180 5556374 -114727938 - B3 SINE B2 -5 211 3 8 627 324 0 0 0 chr13 5556853 5556889 -114727423 + (TC)n Simple_repeat Simple_repeat 1 36 0 8 627 234 0 0 0 chr13 5556889 5556914 -114727398 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 627 21 36 0 0 chr13 5556916 5556944 -114727368 + AT_rich Low_complexity Low_complexity 1 28 0 8 627 253 349 0 0 chr13 5557013 5557079 -114727233 + ID4 SINE ID 2 67 -16 8 627 21 36 0 0 chr13 5557729 5557757 -114726555 + AT_rich Low_complexity Low_complexity 1 28 0 8 627 6272 209 46 15 chr13 5557757 5559289 -114725023 - Lx5 LINE L1 -8 7042 5446 8 627 358 188 0 0 chr13 5559288 5559357 -114724955 + L1_Mur2 LINE L1 4310 4378 -1499 8 627 2220 193 86 10 chr13 5559359 5559850 -114724462 + RLTR11A LTR ERVK 1 528 0 9 627 975 301 126 38 chr13 5561181 5561682 -114722630 - MLT2B4 LTR ERVL -3 553 9 9 627 2249 236 53 7 chr13 5562700 5563246 -114721066 - RMER15 LTR ERVL -3 572 2 9 627 4610 135 27 10 chr13 5564082 5564856 -114719456 - Lx LINE L1 -66 6588 5811 9 627 389 329 79 20 chr13 5565359 5565511 -114718801 + MER104 DNA Tc2 18 178 -3 9 627 241 274 40 14 chr13 5566199 5566273 -114718039 - MIRb SINE MIR -73 195 120 9 627 196 351 0 0 chr13 5567018 5567075 -114717237 - MIRc SINE MIR -190 78 22 9 627 915 350 57 18 chr13 5567865 5568200 -114716112 - MLT1A0 LTR MaLR -3 362 15 9 627 354 302 8 41 chr13 5568290 5568411 -114715901 - RMER15 LTR ERVL -166 409 293 9 627 851 191 111 25 chr13 5568585 5568784 -114715528 + ID_B1 SINE B4 2 217 -7 9 627 855 55 0 0 chr13 5568806 5568915 -114715397 + (GAA)n Simple_repeat Simple_repeat 3 111 0 1 627 436 310 17 8 chr13 5569459 5569576 -114714736 + RSINE1 SINE B4 4 121 -44 1 627 582 15 0 0 chr13 5569577 5569644 -114714668 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 627 376 269 47 28 chr13 5570181 5570288 -114714024 + B3A SINE B2 1 109 -89 1 627 1421 39 0 6 chr13 5570555 5570737 -114713575 - L1Md_A LINE L1 0 6582 6402 1 627 4202 57 2 0 chr13 5570744 5571289 -114713023 + L1Md_A LINE L1 5567 6085 -497 1 627 230 292 133 0 chr13 5571486 5571599 -114712713 - MER5A1 DNA MER1_type -20 146 19 1 627 246 194 0 0 chr13 5572994 5573056 -114711256 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 627 21 0 0 0 chr13 5573454 5573475 -114710837 + AT_rich Low_complexity Low_complexity 1 21 0 1 627 30 83 0 0 chr13 5573564 5573636 -114710676 + AT_rich Low_complexity Low_complexity 1 72 0 1 627 229 172 15 15 chr13 5574248 5574313 -114709999 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 1 627 324 0 0 0 chr13 5574322 5574358 -114709954 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 627 628 350 33 12 chr13 5574366 5574609 -114709703 - B4A SINE B4 -25 267 20 1 627 285 98 0 0 chr13 5575302 5575343 -114708969 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1 627 187 56 83 0 chr13 5575494 5575530 -114708782 + (TATAA)n Simple_repeat Simple_repeat 4 42 0 1 627 585 0 0 0 chr13 5576913 5576978 -114707334 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 627 366 23 0 0 chr13 5576978 5577020 -114707292 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 627 744 274 44 34 chr13 5577061 5577265 -114707047 - B4 SINE B4 -75 217 12 1 627 752 199 0 72 chr13 5577637 5577789 -114706523 + B1_Mur3 SINE Alu 9 149 0 1 627 259 201 52 0 chr13 5577940 5578094 -114706218 + (TA)n Simple_repeat Simple_repeat 2 163 0 1 627 357 24 0 0 chr13 5578138 5578180 -114706132 + (TTTTC)n Simple_repeat Simple_repeat 4 45 0 1 627 7153 105 23 17 chr13 5578180 5579459 -114704853 - Lx LINE L1 -15 6639 5357 1 627 7571 60 3 3 chr13 5579464 5580430 -114703882 - L1Md_F2 LINE L1 0 6582 5617 1 627 2749 173 7 78 chr13 5580423 5581024 -114703288 - Lx LINE L1 -515 5368 4811 1 627 216 0 0 0 chr13 5581081 5581105 -114703207 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1 627 402 21 0 0 chr13 5581109 5581156 -114703156 + (TAG)n Simple_repeat Simple_repeat 1 47 0 1 627 722 254 67 38 chr13 5581156 5581360 -114702952 - B3 SINE B2 -1 215 5 1 627 553 360 56 0 chr13 5581468 5581682 -114702630 + Tigger7 DNA MER2_type 22 247 -2244 1 627 255 284 23 58 chr13 5581701 5581787 -114702525 + Tigger7 DNA MER2_type 2400 2482 -9 1 627 6303 69 13 92 chr13 5582844 5583813 -114700499 + RLTR13B1 LTR ERVK 1 893 0 1 627 596 288 193 0 chr13 5584025 5584268 -114700044 - B4 SINE B4 -2 290 1 1 627 707 290 22 17 chr13 5585024 5585203 -114699109 + ID_B1 SINE B4 2 181 -43 1 627 340 321 27 0 chr13 5585201 5585313 -114698999 - MTC LTR MaLR -306 115 1 1 627 239 321 0 77 chr13 5586641 5586732 -114697580 + ORR1E LTR MaLR 233 316 -43 1 627 222 37 0 0 chr13 5587084 5587111 -114697201 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 627 308 336 15 15 chr13 5587510 5587646 -114696666 + GA-rich Low_complexity Low_complexity 2 137 0 1 627 3469 89 0 19 chr13 5587671 5588152 -114696160 - L1_Mus1 LINE L1 0 6567 6096 1 627 3813 61 2 5 chr13 5588152 5588715 -114695597 + L1_Mus1 LINE L1 5516 6077 -490 1 627 663 314 93 28 chr13 5590231 5590552 -114693760 + MLT1B LTR MaLR 39 380 -10 1 627 782 94 0 8 chr13 5590844 5590962 -114693350 + (GAAAA)n Simple_repeat Simple_repeat 1 117 0 1 627 189 230 105 84 chr13 5591534 5591629 -114692683 + L4 LINE RTE 1724 1820 -209 1 627 7886 94 18 2 chr13 5592684 5594480 -114689832 - L1_Mus3 LINE L1 -5 6633 4810 1 627 457 357 137 18 chr13 5594555 5594622 -114689690 + MLT1F1 LTR MaLR 1 70 -499 1 627 318 26 0 0 chr13 5594622 5594661 -114689651 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 627 457 357 137 18 chr13 5594661 5594935 -114689377 + MLT1F1 LTR MaLR 71 383 -186 1 627 635 319 82 23 chr13 5595426 5595683 -114688629 + MLT1A LTR MaLR 90 361 -13 1 627 308 312 69 89 chr13 5596459 5596640 -114687672 + Arthur1 DNA Tip100 2544 2727 -1220 1 627 371 238 317 0 chr13 5596640 5596804 -114687508 + B3 SINE B2 1 216 0 1 627 308 312 69 89 chr13 5596804 5596868 -114687444 + Arthur1 DNA Tip100 2728 2784 -1163 1 627 854 256 29 198 chr13 5596879 5597066 -114687246 - MTE2a LTR MaLR -5 374 213 1 627 390 291 55 34 chr13 5597066 5597212 -114687100 + B1_Mur2 SINE Alu 1 149 0 1 627 854 256 29 198 chr13 5597212 5597468 -114686844 - MTE2a LTR MaLR -167 212 6 1 627 507 323 64 86 chr13 5597527 5598073 -114686239 + Arthur1 DNA Tip100 2846 3379 -568 1 627 870 306 28 52 chr13 5598245 5598535 -114685777 - B4A SINE B4 0 292 10 1 627 238 373 18 0 chr13 5598568 5598678 -114685634 + Arthur1 DNA Tip100 3459 3570 -377 1 627 478 256 116 72 chr13 5598817 5598998 -114685314 - B3 SINE B2 -5 190 2 1 627 254 375 38 9 chr13 5599307 5599412 -114684900 + PB1D10 SINE Alu 1 108 -9 1 627 427 239 73 0 chr13 5600657 5600766 -114683546 + ID_B1 SINE B4 102 218 -6 1 627 236 313 171 23 chr13 5601226 5601612 -114682700 + Charlie2b DNA MER1_type 2174 2616 -166 1 627 285 387 145 28 chr13 5601765 5602020 -114682292 + B4 SINE B4 6 290 -2 1 627 942 118 0 0 chr13 5602026 5602196 -114682116 + (CA)n Simple_repeat Simple_repeat 1 170 0 1 627 340 330 11 0 chr13 5603130 5603306 -114681006 + (TG)n Simple_repeat Simple_repeat 1 178 0 1 627 219 311 48 19 chr13 5605011 5605116 -114679196 + MIR SINE MIR 121 228 -34 1 627 1181 291 87 28 chr13 5605155 5605614 -114678698 - RMER5 LTR ERV1 -16 518 33 1 627 381 22 0 0 chr13 5605744 5605790 -114678522 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 627 699 278 34 0 chr13 5607407 5607612 -114676700 + B3 SINE B2 2 213 -3 1 627 449 172 0 11 chr13 5610628 5610656 -114673656 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 627 2568 68 56 6 chr13 5610656 5610998 -114673314 - RLTR10D LTR ERVK 0 359 1 1 627 449 172 0 11 chr13 5610998 5611063 -114673249 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 627 787 344 29 15 chr13 5612467 5612741 -114671571 + B4A SINE B4 2 279 -13 1 627 522 91 0 0 chr13 5612747 5612824 -114671488 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 627 205 195 0 0 chr13 5613798 5613839 -114670473 + CT-rich Low_complexity Low_complexity 2 42 0 1 627 210 174 0 0 chr13 5613841 5613887 -114670425 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 627 402 302 0 9 chr13 5613972 5614079 -114670233 + ID_B1 SINE B4 116 221 -3 1 627 249 229 42 28 chr13 5616434 5616506 -114667806 + ID4_ SINE ID 2 74 -9 1 627 544 122 0 10 chr13 5617258 5617357 -114666955 - L1_Mus3 LINE L1 -7 6631 6534 1 627 1157 290 50 33 chr13 5617531 5617895 -114666417 + MTEa LTR MaLR 2 371 -8 1 627 798 148 0 32 chr13 5618128 5618282 -114666030 + Lx2 LINE L1 6849 6997 0 1 627 522 323 30 0 chr13 5618342 5618475 -114665837 + RSINE1 SINE B4 12 148 -17 1 627 306 0 0 0 chr13 5618504 5618538 -114665774 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 627 269 135 19 0 chr13 5619122 5619174 -114665138 + CT-rich Low_complexity Low_complexity 2 54 0 1 627 640 291 11 81 chr13 5619212 5619417 -114664895 + B3A SINE B2 21 216 0 1 627 3965 56 2 2 chr13 5619472 5619972 -114664340 + L1_Mus1 LINE L1 6068 6567 0 1 627 24 0 0 0 chr13 5620007 5620031 -114664281 + AT_rich Low_complexity Low_complexity 1 24 0 1 627 1313 284 84 37 chr13 5620329 5620618 -114663694 + Lx8 LINE L1 6627 6911 -562 1 627 721 201 128 75 chr13 5620618 5620924 -114663388 + RLTRETN_Mm LTR ERVK 1 322 0 1 627 1313 289 110 48 chr13 5620924 5621311 -114663001 + Lx8 LINE L1 6912 7332 -141 1 627 26 64 0 0 chr13 5621766 5621813 -114662499 + AT_rich Low_complexity Low_complexity 1 47 0 1 627 21 36 0 0 chr13 5621941 5621969 -114662343 + AT_rich Low_complexity Low_complexity 1 28 0 1 627 343 385 0 27 chr13 5622002 5622149 -114662163 + ID_B1 SINE B4 82 224 0 1 627 414 0 0 0 chr13 5623005 5623051 -114661261 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 627 426 346 70 12 chr13 5623334 5623591 -114660721 + B4A SINE B4 2 273 -19 1 627 219 314 12 0 chr13 5623630 5623716 -114660596 + (CA)n Simple_repeat Simple_repeat 2 88 0 1 627 1016 223 52 14 chr13 5624334 5624741 -114659571 + Lx9 LINE L1 7194 7636 -8 1 627 2311 199 79 17 chr13 5624879 5625421 -114658891 - Lx7 LINE L1 -367 7329 6754 1 627 395 279 22 7 chr13 5625418 5625555 -114658757 - Lx2B LINE L1 -4 6996 6858 1 627 512 236 0 39 chr13 5625558 5625581 -114658731 - Lx7 LINE L1 -928 6768 6750 1 627 2877 62 18 13 chr13 5625581 5625973 -114658339 + L1Md_F3 LINE L1 6191 6584 0 1 627 512 236 0 39 chr13 5625973 5626077 -114658235 - Lx7 LINE L1 -947 6749 6646 1 627 785 236 96 43 chr13 5626104 5626428 -114657884 + Lx7 LINE L1 7356 7696 0 1 627 390 65 89 8 chr13 5626584 5626707 -114657605 + (TA)n Simple_repeat Simple_repeat 1 133 0 1 627 444 19 0 0 chr13 5628309 5628362 -114655950 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 627 357 43 0 0 chr13 5628364 5628411 -114655901 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 1 627 230 306 0 0 chr13 5628583 5628632 -114655680 - B1_Mur2 SINE Alu -99 50 2 1 627 825 261 23 42 chr13 5628633 5628849 -114655463 + MTEa LTR MaLR 3 214 -165 1 627 244 232 8 8 chr13 5628884 5629010 -114655302 + CT-rich Low_complexity Low_complexity 1 126 0 1 627 589 276 23 34 chr13 5629023 5629199 -114655113 + MTEa LTR MaLR 204 377 -2 1 627 2775 118 24 50 chr13 5630060 5630559 -114653753 + MMETn-int LTR ERVK 4359 4844 0 1 627 1609 138 12 81 chr13 5630559 5630905 -114653407 + RLTRETN_Mm LTR ERVK 1 322 0 1 627 543 299 40 0 chr13 5631194 5631368 -114652944 + B3A SINE B2 2 182 -16 1 627 22 0 0 0 chr13 5631379 5631401 -114652911 + AT_rich Low_complexity Low_complexity 1 22 0 1 627 231 292 11 40 chr13 5632734 5632909 -114651403 + (TG)n Simple_repeat Simple_repeat 1 170 0 1 627 198 191 0 0 chr13 5633148 5633190 -114651122 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 627 270 56 0 0 chr13 5633292 5633328 -114650984 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 627 235 278 14 14 chr13 5634138 5634178 -114650134 + polypurine Low_complexity Low_complexity 3 42 0 2 627 599 26 0 13 chr13 5634178 5634256 -114650056 + (GAGAA)n Simple_repeat Simple_repeat 1 77 0 2 627 235 278 14 14 chr13 5634256 5634288 -114650024 + polypurine Low_complexity Low_complexity 43 73 0 2 627 1155 76 0 0 chr13 5634609 5634781 -114649531 + (TG)n Simple_repeat Simple_repeat 2 173 0 2 627 230 164 0 18 chr13 5634988 5635044 -114649268 + (TA)n Simple_repeat Simple_repeat 2 56 0 2 627 658 158 125 0 chr13 5635112 5635232 -114649080 + RMER15 LTR ERVL 441 575 0 2 628 400 359 40 35 chr13 5636499 5636701 -114647611 + MLT2B1 LTR ERVL 14 216 -304 2 628 221 262 29 71 chr13 5637189 5637259 -114647053 + ID2 SINE ID 14 80 -3 2 628 554 207 18 6 chr13 5637282 5637452 -114646860 + (TAGA)n Simple_repeat Simple_repeat 2 173 0 2 628 2210 85 28 16 chr13 5638665 5638986 -114645326 + IAPLTR2b LTR ERVK 1 325 -2 2 628 234 309 0 69 chr13 5639418 5639505 -114644807 - B4 SINE B4 -210 82 2 2 628 441 361 49 95 chr13 5639871 5640177 -114644135 + B4 SINE B4 1 292 0 2 628 291 314 29 10 chr13 5641489 5641592 -114642720 - MIRb SINE MIR -6 262 158 2 628 15099 30 2 5 chr13 5642759 5645247 -114639065 - L1Md_F2 LINE L1 -2 6580 4105 2 628 243 212 15 15 chr13 5645532 5645599 -114638713 - Lx9 LINE L1 -1088 6556 6490 2 628 518 311 16 16 chr13 5645978 5646161 -114638151 + Lx9 LINE L1 6409 6591 -1053 2 628 1362 323 74 32 chr13 5646162 5647213 -114637099 + L1_Mur3 LINE L1 4628 5722 -158 2 628 30954 112 13 5 chr13 5648773 5651692 -114632620 + L1_Mus1 LINE L1 558 3489 -2394 2 628 225 83 0 0 chr13 5651692 5651728 -114632584 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2 628 30954 98 4 4 chr13 5651728 5654795 -114629517 + L1_Mus1 LINE L1 3490 6566 -1 2 628 906 10 0 0 chr13 5654815 5654918 -114629394 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 2 628 579 149 0 9 chr13 5656323 5656431 -114627881 + Lx2B LINE L1 6802 6908 -92 2 628 553 293 13 6 chr13 5656504 5656662 -114627650 - RSINE1 SINE B4 -2 163 5 2 628 575 336 128 26 chr13 5656964 5657386 -114626926 - L2 LINE L2 -1002 2417 1953 2 628 259 61 95 24 chr13 5657443 5657527 -114626785 + (TCTA)n Simple_repeat Simple_repeat 3 92 0 2 628 859 295 28 20 chr13 5657660 5658016 -114626296 - L1M2 LINE L1 -1042 5101 4743 2 628 296 258 115 41 chr13 5658127 5658345 -114625967 - L1M2 LINE L1 -1432 4708 4475 2 628 225 94 0 0 chr13 5660263 5660295 -114624017 + (ATGGTG)n Simple_repeat Simple_repeat 1 32 0 2 628 532 323 26 6 chr13 5660318 5660474 -114623838 - B4A SINE B4 -1 291 133 2 628 11463 154 31 17 chr13 5660702 5663425 -114620887 - Lx4B LINE L1 -6 7052 4286 2 628 198 71 0 0 chr13 5663425 5663453 -114620859 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 2 628 11463 141 35 11 chr13 5663453 5663915 -114620397 - Lx4B LINE L1 -1592 4285 3804 2 628 1891 122 3 3 chr13 5663921 5664241 -114620071 - Lx4B LINE L1 -4258 1619 1300 2 628 3290 188 51 17 chr13 5664233 5664922 -114619390 + Lx4B LINE L1 598 1309 -5777 2 628 26 50 0 0 chr13 5665206 5665246 -114619066 + AT_rich Low_complexity Low_complexity 1 40 0 2 628 28 29 0 0 chr13 5666400 5666435 -114617877 + AT_rich Low_complexity Low_complexity 1 35 0 2 628 1105 82 0 45 chr13 5667233 5667387 -114616925 + B1_Mus1 SINE Alu 1 147 -1 2 628 202 47 0 122 chr13 5667455 5667504 -114616808 + T-rich Low_complexity Low_complexity 2 44 0 2 628 408 252 9 0 chr13 5669015 5669122 -114615190 + Lx7 LINE L1 6214 6321 -1375 2 628 525 214 26 46 chr13 5669140 5669292 -114615020 - RLTR43A LTR ERVK 0 364 216 2 628 3037 297 29 13 chr13 5669463 5670445 -114613867 + Lx7 LINE L1 6318 7314 -382 2 628 501 17 0 0 chr13 5670487 5670545 -114613767 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 628 282 282 27 18 chr13 5670643 5670755 -114613557 + Lx7 LINE L1 7566 7678 -18 2 628 370 327 0 0 chr13 5671087 5671197 -114613115 - Lx8 LINE L1 -132 7341 7232 2 628 7165 147 19 10 chr13 5671246 5672423 -114611889 + Lx4A LINE L1 5869 7056 -2 2 628 189 121 0 0 chr13 5672571 5672604 -114611708 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 628 273 75 0 0 chr13 5672606 5672646 -114611666 + (CCA)n Simple_repeat Simple_repeat 1 40 0 2 628 683 192 0 14 chr13 5672665 5672813 -114611499 + L1_Mur3 LINE L1 2066 2211 -3669 2 628 438 20 0 0 chr13 5672898 5672949 -114611363 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 628 296 292 22 96 chr13 5672986 5673164 -114611148 - MER5C DNA MER1_type -137 176 12 2 628 23 68 0 0 chr13 5674450 5674494 -114609818 + AT_rich Low_complexity Low_complexity 1 44 0 2 628 22 0 0 0 chr13 5675329 5675351 -114608961 + AT_rich Low_complexity Low_complexity 1 22 0 2 628 2563 94 27 0 chr13 5676007 5676378 -114607934 + L1_Mus3 LINE L1 6253 6633 -5 2 628 823 301 0 0 chr13 5676879 5677085 -114607227 + B3 SINE B2 2 207 -9 2 628 254 258 0 16 chr13 5677088 5677151 -114607161 + GA-rich Low_complexity Low_complexity 3 64 0 2 628 21 36 0 0 chr13 5677237 5677265 -114607047 + AT_rich Low_complexity Low_complexity 1 28 0 2 628 2541 193 75 4 chr13 5677266 5677802 -114606510 - RMER15 LTR ERVL 0 575 2 2 628 461 279 177 98 chr13 5677913 5678291 -114606021 - MLT1A1 LTR MaLR 0 408 1 2 628 292 346 159 0 chr13 5678611 5678718 -114605594 + RSINE1 SINE B4 12 135 -30 2 628 497 94 12 0 chr13 5678727 5678812 -114605500 + (CA)n Simple_repeat Simple_repeat 2 87 0 2 628 603 341 43 70 chr13 5680494 5680863 -114603449 + ORR1E LTR MaLR 1 359 0 2 628 252 0 0 0 chr13 5681075 5681103 -114603209 + (A)n Simple_repeat Simple_repeat 1 28 0 2 628 234 62 0 0 chr13 5681850 5681882 -114602430 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 628 409 34 34 0 chr13 5681882 5681941 -114602371 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 628 21 82 0 0 chr13 5682102 5682151 -114602161 + AT_rich Low_complexity Low_complexity 1 49 0 2 628 561 296 53 0 chr13 5683946 5684115 -114600197 + B3A SINE B2 5 182 -16 2 628 240 313 74 30 chr13 5684208 5684343 -114599969 - MLT1A LTR MaLR -17 357 217 2 628 8747 197 100 13 chr13 5684401 5687904 -114596408 + Lx6 LINE L1 3640 7455 -5 2 628 807 295 66 19 chr13 5688010 5688266 -114596046 - B4A SINE B4 -19 273 6 2 628 5704 63 62 4 chr13 5688439 5689233 -114595079 - L1_Mus1 LINE L1 0 6567 5728 2 628 2527 108 46 56 chr13 5689233 5689646 -114594666 - RLTR9E LTR ERVK 0 409 1 2 628 498 67 0 39 chr13 5689646 5689724 -114594588 - MMETn-int LTR ERVK 0 7406 7332 2 628 2593 182 75 78 chr13 5689944 5691302 -114593010 - MMETn-int LTR ERVK -1703 3141 2359 2 628 5882 88 19 8 chr13 5691290 5692137 -114592175 - ETnERV2-int LTR ERVK -1644 5762 4907 2 628 1324 38 0 0 chr13 5692137 5692297 -114592015 + B2_Mm1a SINE B2 1 160 -33 2 628 486 0 0 0 chr13 5692297 5692351 -114591961 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 2 628 9441 121 18 10 chr13 5692352 5693817 -114590495 - ETnERV2-int LTR ERVK -2489 4917 3441 2 628 5482 126 19 9 chr13 5694137 5695081 -114589231 - ETnERV2-int LTR ERVK -3958 3448 2496 2 628 4625 152 71 25 chr13 5695106 5696076 -114588236 - ETnERV2-int LTR ERVK -5321 2085 1071 2 628 1276 203 42 50 chr13 5696086 5696465 -114587847 - ETnERV2-int LTR ERVK -2927 387 12 2 628 2511 123 45 13 chr13 5696476 5696872 -114587440 - RLTR9E LTR ERVK 0 409 1 2 628 3425 84 8 0 chr13 5696872 5697358 -114586954 - L1_Mm LINE L1 -150 5733 5244 2 628 11221 99 9 2 chr13 5697356 5699046 -114585266 + L1_Mm LINE L1 3531 5232 -651 2 628 442 296 126 21 chr13 5699042 5699104 -114585208 - Lx8 LINE L1 -127 7346 7284 2 628 192 83 41 20 chr13 5699104 5699153 -114585159 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 628 442 296 126 21 chr13 5699153 5699328 -114584984 - Lx8 LINE L1 -190 7283 7085 2 628 521 237 185 30 chr13 5699364 5699564 -114584748 - Lx8 LINE L1 -494 6979 6749 2 628 473 292 60 23 chr13 5699619 5699752 -114584560 + RSINE1 SINE B4 4 141 -24 2 628 180 0 0 0 chr13 5699794 5699814 -114584498 + (T)n Simple_repeat Simple_repeat 1 20 0 2 628 588 121 0 0 chr13 5700716 5700807 -114583505 + (TCTCC)n Simple_repeat Simple_repeat 5 95 0 2 628 648 305 69 28 chr13 5700900 5701073 -114583239 - B4A SINE B4 -24 268 85 2 628 261 0 0 0 chr13 5701073 5701102 -114583210 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 628 648 305 69 28 chr13 5701102 5701144 -114583168 - B4A SINE B4 -208 84 44 2 628 1426 149 86 0 chr13 5701144 5701399 -114582913 - Lx4A LINE L1 -203 6855 6579 2 628 736 276 29 19 chr13 5701409 5701616 -114582696 - ID_B1 SINE B4 -7 217 9 2 628 690 170 27 54 chr13 5701707 5701856 -114582456 + B1_Mur3 SINE Alu 5 149 0 2 628 320 138 15 0 chr13 5702856 5702921 -114581391 + CT-rich Low_complexity Low_complexity 3 68 0 2 628 414 0 0 0 chr13 5703206 5703252 -114581060 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 628 21 57 0 0 chr13 5703281 5703316 -114580996 + AT_rich Low_complexity Low_complexity 1 35 0 2 628 191 296 150 20 chr13 5703640 5703740 -114580572 - MIRb SINE MIR -50 218 106 2 628 252 130 0 0 chr13 5703881 5703927 -114580385 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 628 777 236 193 46 chr13 5704089 5704395 -114579917 + ORR1B2 LTR MaLR 1 351 -16 2 628 230 300 56 65 chr13 5704537 5704644 -114579668 - ORR1E LTR MaLR -162 197 92 2 628 396 0 0 0 chr13 5705497 5705541 -114578771 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 628 228 35 0 0 chr13 5705541 5705569 -114578743 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 628 450 0 0 0 chr13 5706421 5706471 -114577841 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 628 801 192 12 0 chr13 5706797 5706964 -114577348 - RLTR15 LTR ERVK -187 172 4 2 628 332 247 11 0 chr13 5707535 5707624 -114576688 + Lx7 LINE L1 7124 7213 -483 2 628 228 242 92 71 chr13 5707836 5707934 -114576378 - B1_Mur4 SINE Alu -2 148 49 2 628 245 292 46 0 chr13 5709400 5709465 -114574847 - B1F2 SINE Alu -59 90 23 2 628 477 50 0 0 chr13 5709557 5709617 -114574695 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 628 308 255 24 182 chr13 5709617 5709784 -114574528 - L1MA9 LINE L1 -91 6221 6103 2 628 491 266 47 40 chr13 5709784 5709933 -114574379 - RSINE1 SINE B4 -14 151 2 2 628 308 255 24 182 chr13 5709933 5710062 -114574250 - L1MA9 LINE L1 -210 6102 5972 2 628 768 262 137 4 chr13 5711497 5711738 -114572574 + B4A SINE B4 18 290 -2 2 628 818 62 9 0 chr13 5711769 5711882 -114572430 + (CA)n Simple_repeat Simple_repeat 2 115 0 2 628 313 281 137 0 chr13 5711908 5712061 -114572251 + Lx6 LINE L1 7257 7430 -30 2 628 207 214 0 0 chr13 5712061 5712103 -114572209 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2 628 206 95 24 0 chr13 5712315 5712357 -114571955 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 3 628 484 300 179 0 chr13 5714685 5714875 -114569437 - ID_B1 SINE B4 0 224 1 3 628 238 275 47 7 chr13 5715094 5715244 -114569068 + (TAGA)n Simple_repeat Simple_repeat 4 159 0 3 628 237 207 37 0 chr13 5715271 5715353 -114568959 + (TAGA)n Simple_repeat Simple_repeat 3 87 0 3 628 234 359 65 18 chr13 5715854 5716027 -114568285 + MIRc SINE MIR 5 182 -86 3 628 221 319 182 5 chr13 5716033 5716225 -114568087 + L2 LINE L2 2547 2772 -647 3 628 243 0 0 0 chr13 5716250 5716277 -114568035 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 628 568 358 21 43 chr13 5716306 5716586 -114567726 - B4A SINE B4 -8 284 11 3 628 777 272 113 14 chr13 5716816 5717136 -114567176 + Tigger12A DNA MER2_type 363 783 -8 3 628 191 234 0 21 chr13 5717752 5717800 -114566512 - MIR SINE MIR -83 179 133 3 628 7663 58 4 0 chr13 5718566 5719528 -114564784 + L1Md_F2 LINE L1 5617 6582 0 3 628 638 263 22 0 chr13 5721027 5721164 -114563148 - B3 SINE B2 -76 140 1 3 628 480 160 0 0 chr13 5721482 5721601 -114562711 + A-rich Low_complexity Low_complexity 1 119 0 3 628 2118 137 66 16 chr13 5721835 5722213 -114562099 + RLTR9E LTR ERVK 13 409 0 3 628 538 286 52 42 chr13 5722609 5722629 -114561683 - B3A SINE B2 -2 196 174 3 628 569 14 14 0 chr13 5722629 5722699 -114561613 + (TATG)n Simple_repeat Simple_repeat 4 74 0 3 628 538 286 52 42 chr13 5722699 5722871 -114561441 - B3A SINE B2 -25 173 2 3 628 351 0 0 0 chr13 5723960 5723999 -114560313 + (T)n Simple_repeat Simple_repeat 1 39 0 3 628 1249 27 0 0 chr13 5723999 5724145 -114560167 - B1_Mus2 SINE Alu 0 147 2 3 628 468 281 7 46 chr13 5726704 5726857 -114557455 - ID_B1 SINE B4 -2 222 76 3 628 405 0 0 0 chr13 5727154 5727199 -114557113 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 628 219 139 0 0 chr13 5727704 5727740 -114556572 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 628 450 276 17 0 chr13 5727876 5727992 -114556320 + PB1D9 SINE Alu 3 120 0 3 628 1646 159 29 49 chr13 5728760 5729180 -114555132 - RMER17C LTR ERVK -519 439 16 3 628 1277 176 0 12 chr13 5729183 5729431 -114554881 - RMER17C-int LTR ERVK 0 3238 2994 3 628 1336 177 36 51 chr13 5729463 5729796 -114554516 - RMER17C LTR ERVK -82 328 1 3 628 404 292 92 0 chr13 5729831 5729951 -114554361 - ID_B1 SINE B4 -29 195 65 3 628 369 0 0 0 chr13 5730071 5730112 -114554200 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 628 306 367 0 44 chr13 5730126 5730240 -114554072 - B3A SINE B2 -57 141 33 3 628 339 285 110 19 chr13 5730624 5730778 -114553534 + MLT1A1 LTR MaLR 21 188 -220 3 628 254 351 120 42 chr13 5731424 5731665 -114552647 - MIRb SINE MIR -6 262 3 3 628 211 339 27 18 chr13 5731873 5731984 -114552328 + MIRb SINE MIR 115 226 -42 3 628 245 349 0 0 chr13 5732116 5732199 -114552113 - MER63B DNA AcHobo -43 393 311 3 628 184 325 117 0 chr13 5732367 5732444 -114551868 - L2a LINE L2 -44 3382 3297 3 628 353 354 101 21 chr13 5732509 5732795 -114551517 + ORR1E LTR MaLR 43 351 -8 3 628 753 252 19 65 chr13 5732946 5733162 -114551150 - B3 SINE B2 -10 206 1 3 628 324 70 0 0 chr13 5734097 5734140 -114550172 + (CATA)n Simple_repeat Simple_repeat 3 45 0 3 628 277 324 10 19 chr13 5735163 5735267 -114549045 + CT-rich Low_complexity Low_complexity 5 107 0 3 628 861 215 0 31 chr13 5735421 5735613 -114548699 + Lx4A LINE L1 6870 7055 -3 3 628 542 289 0 82 chr13 5736336 5736483 -114547829 - RSINE1 SINE B4 -24 141 7 3 628 1925 231 40 140 chr13 5738055 5738565 -114545747 - Lx6 LINE L1 -149 7547 6879 3 628 252 0 0 0 chr13 5738565 5738593 -114545719 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 628 1925 229 41 150 chr13 5738593 5738909 -114545403 - Lx6 LINE L1 -582 6878 6552 3 628 2952 81 2 19 chr13 5738994 5739408 -114544904 + L1_Mus1 LINE L1 6161 6567 0 3 628 268 264 72 9 chr13 5739603 5739714 -114544598 - Looper DNA PiggyBac -1142 416 299 3 628 207 0 0 0 chr13 5740523 5740546 -114543766 + (TC)n Simple_repeat Simple_repeat 2 24 0 3 628 316 309 118 8 chr13 5740887 5741014 -114543298 + B4A SINE B4 1 141 -151 3 628 1418 337 64 26 chr13 5741087 5741666 -114542646 - Tigger7 DNA MER2_type -1842 649 49 3 628 222 316 186 18 chr13 5743435 5743709 -114540603 + L2a LINE L2 2387 2706 -713 3 628 187 302 46 31 chr13 5743946 5744011 -114540301 + L2a LINE L2 3327 3392 -34 3 628 28400 90 10 33 chr13 5744973 5749304 -114535008 + L1Md_F2 LINE L1 410 4689 -1194 3 628 4244 51 2 8 chr13 5749304 5749819 -114534493 + LTRIS3 LTR ERV1 1 512 0 3 628 28400 91 8 26 chr13 5749819 5750577 -114533735 + L1Md_F2 LINE L1 4690 5457 -426 3 628 3454 77 0 0 chr13 5750577 5751032 -114533280 + L1Md_T LINE L1 6128 6582 0 3 628 28400 91 8 26 chr13 5751032 5751237 -114533075 + L1Md_F2 LINE L1 5458 5585 -298 3 628 6712 107 26 6 chr13 5751238 5752215 -114532097 + L1Md_F2 LINE L1 5587 6582 0 3 628 207 114 0 0 chr13 5752218 5752253 -114532059 + (A)n Simple_repeat Simple_repeat 1 35 0 3 628 800 186 16 0 chr13 5752600 5752845 -114531467 + GA-rich Low_complexity Low_complexity 1 248 0 3 628 392 97 0 16 chr13 5752850 5752913 -114531399 + (GGGGA)n Simple_repeat Simple_repeat 5 66 0 3 628 560 288 39 59 chr13 5752938 5753246 -114531066 - MTE2a LTR MaLR -28 351 66 3 628 4480 40 2 16 chr13 5753326 5753886 -114530426 - L1Md_F2 LINE L1 -1 6581 6030 3 628 313 314 53 10 chr13 5753912 5754031 -114530281 + B4A SINE B4 45 173 -119 3 628 457 322 20 27 chr13 5754116 5754266 -114530046 + B1F SINE Alu 1 149 0 3 628 200 128 51 0 chr13 5755408 5755447 -114528865 + MIRc SINE MIR 104 144 -124 3 628 213 323 45 108 chr13 5755785 5756007 -114528305 - L2 LINE L2 -371 3048 2841 3 628 523 333 113 61 chr13 5756085 5756561 -114527751 + MLT1F2 LTR MaLR 3 503 -57 3 628 340 319 78 31 chr13 5757509 5757700 -114526612 - Arthur1 DNA Tip100 -82 3865 3666 3 628 766 266 61 101 chr13 5757740 5758097 -114526215 - MTE2a LTR MaLR -41 338 18 3 628 467 221 163 16 chr13 5758121 5758250 -114526062 + B1_Mur3 SINE Alu 2 149 0 3 628 483 279 88 45 chr13 5758558 5758889 -114525423 - Arthur1 DNA Tip100 -727 3220 2876 3 628 210 322 85 26 chr13 5759435 5759588 -114524724 - L2c LINE L2 -52 3335 3174 3 628 205 149 43 0 chr13 5759835 5759882 -114524430 + (TAA)n Simple_repeat Simple_repeat 1 49 0 3 628 398 322 50 86 chr13 5760406 5760555 -114523757 + MTEb LTR MaLR 85 221 -158 3 628 531 0 0 0 chr13 5760555 5760614 -114523698 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 628 420 77 0 0 chr13 5760615 5760680 -114523632 + (TCTG)n Simple_repeat Simple_repeat 2 66 0 3 628 398 322 50 86 chr13 5760680 5760830 -114523482 + MTEb LTR MaLR 222 375 -4 3 628 335 337 57 47 chr13 5760959 5761171 -114523141 - MLT1G3 LTR MaLR -378 217 4 3 628 466 342 7 19 chr13 5761326 5761481 -114522831 - B4 SINE B4 -137 155 3 3 628 372 252 51 86 chr13 5762389 5762493 -114521819 + B1_Mur2 SINE Alu 33 135 -14 3 628 555 90 0 0 chr13 5762493 5762571 -114521741 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 3 628 372 252 51 86 chr13 5762571 5762583 -114521729 + B1_Mur2 SINE Alu 136 145 -4 3 628 375 340 82 85 chr13 5762835 5763189 -114521123 + MLT1A LTR MaLR 1 353 -21 3 628 3501 175 23 40 chr13 5763411 5764153 -114520159 + RMER6A LTR ERVK 1 756 0 3 628 261 342 23 70 chr13 5764486 5764615 -114519697 + B4 SINE B4 9 131 -161 3 628 575 269 33 39 chr13 5765189 5765354 -114518958 + B3A SINE B2 1 168 -30 3 628 1215 67 0 0 chr13 5765354 5765625 -114518687 + (CA)n Simple_repeat Simple_repeat 1 271 0 3 628 575 269 33 39 chr13 5765625 5765639 -114518673 + B3A SINE B2 169 181 -17 3 628 289 363 56 43 chr13 5765835 5766068 -114518244 + MIRb SINE MIR 28 263 -5 3 628 606 302 31 54 chr13 5766547 5766771 -114517541 + ID_B1 SINE B4 6 224 0 3 628 295 125 59 52 chr13 5766781 5766916 -114517396 + (CAGAGA)n Simple_repeat Simple_repeat 3 138 0 3 629 25 51 0 0 chr13 5767699 5767738 -114516574 + AT_rich Low_complexity Low_complexity 1 39 0 3 629 690 183 0 0 chr13 5770939 5771059 -114513253 - PB1D9 SINE Alu 0 120 1 3 629 412 275 196 15 chr13 5771232 5771438 -114512874 - B4A SINE B4 -33 259 17 3 629 253 43 0 61 chr13 5772949 5772998 -114511314 + (TTTTTG)n Simple_repeat Simple_repeat 1 46 0 3 629 744 334 49 26 chr13 5773596 5773943 -114510369 + MLT1A LTR MaLR 4 358 -16 3 629 854 278 58 4 chr13 5774359 5774633 -114509679 - B4A SINE B4 0 292 4 3 629 195 222 0 0 chr13 5774751 5774796 -114509516 + GA-rich Low_complexity Low_complexity 3 47 0 3 629 702 298 52 39 chr13 5775353 5775639 -114508673 - B4 SINE B4 -2 290 1 3 629 259 391 7 19 chr13 5777166 5777320 -114506992 + MER5A1 DNA MER1_type 6 157 -9 3 629 525 71 0 0 chr13 5777366 5777436 -114506876 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 629 207 314 126 47 chr13 5777563 5777690 -114506622 - MIRc SINE MIR -102 166 30 3 629 25 65 0 0 chr13 5778624 5778670 -114505642 + AT_rich Low_complexity Low_complexity 1 46 0 3 629 441 0 0 0 chr13 5779863 5779912 -114504400 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 629 557 301 66 10 chr13 5780388 5780586 -114503726 + ID_B1 SINE B4 5 213 -11 3 629 260 311 42 83 chr13 5780609 5780758 -114503554 + B4A SINE B4 1 135 -89 3 629 264 260 37 61 chr13 5780823 5780905 -114503407 + RSINE1 SINE B4 86 165 0 3 629 21 0 0 0 chr13 5780946 5780967 -114503345 + AT_rich Low_complexity Low_complexity 1 21 0 3 629 407 333 77 12 chr13 5781157 5781327 -114502985 + MER45R DNA Tip100 4 184 -1397 3 629 335 359 31 37 chr13 5781385 5781576 -114502736 - MLT1A LTR MaLR -12 362 173 3 629 27 49 0 0 chr13 5782215 5782256 -114502056 + AT_rich Low_complexity Low_complexity 1 41 0 3 629 4610 123 10 4 chr13 5782256 5782952 -114501360 - Lx2 LINE L1 0 6997 6298 3 629 459 0 0 0 chr13 5783005 5783056 -114501256 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 629 275 395 58 18 chr13 5783088 5783270 -114501042 - B3 SINE B2 -17 199 2 4 629 484 264 45 57 chr13 5783832 5783989 -114500323 - RSINE1 SINE B4 -10 155 1 4 629 561 339 77 52 chr13 5784053 5784377 -114499935 + MLT2D LTR ERVL 4 335 -221 4 629 391 256 41 6 chr13 5784427 5784442 -114499870 + (TCTA)n Simple_repeat Simple_repeat 3 17 0 4 629 231 114 0 0 chr13 5784442 5784477 -114499835 + (TATG)n Simple_repeat Simple_repeat 4 38 0 4 629 391 256 41 6 chr13 5784477 5784630 -114499682 + (TCTA)n Simple_repeat Simple_repeat 3 162 0 4 629 353 296 285 29 chr13 5784695 5784968 -114499344 + LTR40a LTR ERVL 8 350 -112 4 629 404 376 27 11 chr13 5785175 5785358 -114498954 + MLT1F1 LTR MaLR 47 232 -337 4 629 351 0 0 0 chr13 5785512 5785551 -114498761 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 629 495 0 0 0 chr13 5785619 5785674 -114498638 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 629 961 306 171 6 chr13 5785816 5786161 -114498151 - MTD LTR MaLR 0 419 18 4 629 218 311 16 0 chr13 5787378 5787439 -114496873 + PB1D10 SINE Alu 37 98 -19 4 629 270 311 0 63 chr13 5787785 5787864 -114496448 - B4A SINE B4 -2 290 217 4 629 519 311 21 116 chr13 5787855 5788088 -114496224 - B3A SINE B2 0 216 6 4 629 721 284 88 5 chr13 5788080 5788296 -114496016 - B4A SINE B4 -58 234 1 4 629 894 327 72 19 chr13 5789721 5790157 -114494155 - MLT1C LTR MaLR -21 446 7 4 629 2999 180 11 9 chr13 5791417 5791990 -114492322 + Lx LINE L1 6078 6651 -3 4 629 751 312 116 18 chr13 5792238 5792626 -114491686 + Lx8 LINE L1 6688 7113 -360 4 629 486 0 0 0 chr13 5793683 5793737 -114490575 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 629 25 51 0 0 chr13 5793817 5793856 -114490456 + AT_rich Low_complexity Low_complexity 1 39 0 4 629 284 268 170 0 chr13 5793960 5794072 -114490240 + PB1D10 SINE Alu 6 136 -13 4 629 404 309 27 0 chr13 5794330 5794440 -114489872 + Tigger7 DNA MER2_type 195 307 -2184 4 629 271 339 31 46 chr13 5794441 5794571 -114489741 + Tigger7 DNA MER2_type 2132 2259 -232 4 629 482 327 100 33 chr13 5794843 5795172 -114489140 + HAL1 LINE L1 1709 2059 -448 4 629 279 324 45 53 chr13 5795797 5796027 -114488285 + MIR SINE MIR 1 221 -41 4 629 208 373 0 0 chr13 5796405 5796464 -114487848 + L2b LINE L2 3301 3359 -16 4 629 303 258 89 24 chr13 5796735 5796858 -114487454 - B3A SINE B2 -66 132 2 4 629 704 286 87 5 chr13 5796858 5797063 -114487249 - B4A SINE B4 -61 231 10 4 629 471 63 0 0 chr13 5797234 5797297 -114487015 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 629 23 0 0 0 chr13 5797434 5797457 -114486855 + AT_rich Low_complexity Low_complexity 1 23 0 4 629 351 98 0 0 chr13 5797555 5797616 -114486696 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 4 629 205 151 38 0 chr13 5797617 5797670 -114486642 + (TATG)n Simple_repeat Simple_repeat 4 58 0 4 629 714 329 41 8 chr13 5797675 5797937 -114486375 - ID_B1 SINE B4 0 292 11 4 629 639 280 80 0 chr13 5798436 5798636 -114485676 - ID_B1 SINE B4 -8 216 1 4 629 1365 151 0 22 chr13 5799917 5800147 -114484165 + URR1B DNA MER1_type 1 225 0 4 629 253 225 68 27 chr13 5800343 5800416 -114483896 - MLT1B LTR MaLR -55 335 260 4 629 489 151 0 0 chr13 5800974 5801060 -114483252 + (TA)n Simple_repeat Simple_repeat 1 86 0 4 629 270 262 16 0 chr13 5801060 5801121 -114483191 - B3 SINE B2 -13 203 142 4 629 388 262 37 9 chr13 5801120 5801228 -114483084 + ID_B1 SINE B4 104 214 -10 4 629 334 250 29 64 chr13 5801243 5801363 -114482949 + PB1D7 SINE Alu 2 118 -2 4 629 252 325 8 107 chr13 5801455 5801586 -114482726 - MamSINE1 SINE tRNA -136 154 37 4 629 473 223 76 97 chr13 5801865 5802009 -114482303 + B1_Mur1 SINE Alu 9 149 0 4 629 197 83 0 27 chr13 5804370 5804407 -114479905 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 629 930 278 57 15 chr13 5804428 5804691 -114479621 - B4 SINE B4 -18 274 1 4 629 417 123 0 0 chr13 5805402 5805467 -114478845 + (CTTG)n Simple_repeat Simple_repeat 2 66 0 4 629 388 298 35 28 chr13 5805467 5805603 -114478709 - B1F1 SINE Alu -10 139 1 4 629 259 241 17 0 chr13 5805620 5805678 -114478634 - B1F2 SINE Alu -90 59 1 4 629 348 304 49 16 chr13 5806009 5806193 -114478119 + B3A SINE B2 1 190 -8 4 629 197 24 70 23 chr13 5806640 5806683 -114477629 + (TA)n Simple_repeat Simple_repeat 1 45 0 4 629 21 0 0 0 chr13 5806697 5806718 -114477594 + AT_rich Low_complexity Low_complexity 1 21 0 4 629 456 252 17 9 chr13 5806719 5806835 -114477477 + MT2A LTR ERVL 1 117 -416 4 629 372 179 0 0 chr13 5806960 5807077 -114477235 + T-rich Low_complexity Low_complexity 1 117 0 4 629 21 0 0 0 chr13 5807435 5807456 -114476856 + AT_rich Low_complexity Low_complexity 1 21 0 4 629 264 358 60 33 chr13 5808039 5808221 -114476091 - Cheshire DNA MER1_type -2215 205 19 4 629 250 180 0 20 chr13 5808631 5808682 -114475630 + MIRc SINE MIR 85 134 -134 4 629 240 294 100 27 chr13 5808805 5808909 -114475403 + PB1D10 SINE Alu 1 108 -41 4 629 330 26 0 0 chr13 5808920 5808959 -114475353 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 4 629 203 152 0 0 chr13 5808962 5808995 -114475317 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 629 621 351 22 30 chr13 5809351 5809618 -114474694 + B4A SINE B4 26 290 -2 4 629 4300 42 2 6 chr13 5810098 5810619 -114473693 - MURVY-LTR LTR ERV1 0 519 1 4 629 248 375 168 47 chr13 5810873 5811182 -114473130 + L4 LINE RTE 664 996 -1033 4 629 2931 96 0 8 chr13 5811182 5811581 -114472731 - MTA_Mm LTR MaLR 0 396 1 4 629 248 375 168 47 chr13 5811581 5811872 -114472440 + L4 LINE RTE 997 1337 -692 4 629 353 332 30 40 chr13 5812070 5812268 -114472044 + B3A SINE B2 2 197 -1 4 629 714 206 199 6 chr13 5812349 5812530 -114471782 + B3 SINE B2 1 216 0 4 629 337 192 33 16 chr13 5813948 5814070 -114470242 - Lx9 LINE L1 -1 7643 7520 4 629 564 15 0 0 chr13 5814072 5814137 -114470175 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 629 257 70 0 44 chr13 5814203 5814237 -114470075 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 4 629 1972 80 0 77 chr13 5814237 5814563 -114469749 - L1_Mus2 LINE L1 0 6566 6266 4 629 257 70 0 44 chr13 5814563 5814573 -114469739 + (GTTTG)n Simple_repeat Simple_repeat 2 11 0 4 629 383 0 21 0 chr13 5814814 5814861 -114469451 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 629 775 258 20 40 chr13 5814869 5815071 -114469241 + B3 SINE B2 2 199 -17 4 629 25 0 0 0 chr13 5815108 5815133 -114469179 + AT_rich Low_complexity Low_complexity 1 25 0 4 629 24 67 0 0 chr13 5815779 5815824 -114468488 + AT_rich Low_complexity Low_complexity 1 45 0 4 629 783 154 224 22 chr13 5815987 5816166 -114468146 - B3 SINE B2 0 216 2 4 629 282 375 42 71 chr13 5816791 5817029 -114467283 - MIRb SINE MIR -21 247 17 4 629 778 184 169 21 chr13 5817060 5817249 -114467063 + URR1B DNA MER1_type 1 217 -8 4 629 185 254 16 48 chr13 5818095 5818157 -114466155 + L2c LINE L2 3319 3378 -9 4 629 432 0 0 0 chr13 5819169 5819217 -114465095 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 629 249 57 0 0 chr13 5819364 5819399 -114464913 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 629 306 0 0 0 chr13 5819498 5819532 -114464780 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 629 24 0 0 0 chr13 5819734 5819758 -114464554 + AT_rich Low_complexity Low_complexity 1 24 0 4 629 242 307 55 82 chr13 5819795 5819905 -114464407 + LTR78 LTR ERV1 859 965 -339 4 629 1471 97 54 17 chr13 5819864 5820105 -114464207 + RLTR11B LTR ERVK 203 452 -1 4 629 246 171 43 0 chr13 5820105 5820175 -114464137 + CT-rich Low_complexity Low_complexity 5 77 0 4 629 683 290 176 0 chr13 5820749 5820994 -114463318 + B4A SINE B4 2 289 -3 4 629 360 0 0 0 chr13 5821013 5821053 -114463259 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 629 237 325 0 38 chr13 5823043 5823200 -114461112 + (CATA)n Simple_repeat Simple_repeat 2 152 0 4 629 342 0 0 0 chr13 5823252 5823290 -114461022 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 629 249 57 0 0 chr13 5824217 5824252 -114460060 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 4 629 252 0 0 0 chr13 5824406 5824434 -114459878 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 629 222 37 0 0 chr13 5827447 5827474 -114456838 + (TAA)n Simple_repeat Simple_repeat 2 28 0 4 629 192 77 0 0 chr13 5828652 5828678 -114455634 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 4 629 275 317 166 58 chr13 5828875 5829116 -114455196 + B4A SINE B4 8 274 -18 4 629 207 88 0 0 chr13 5829190 5829224 -114455088 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 4 629 937 42 0 0 chr13 5829273 5829393 -114454919 - B1_Mm SINE Alu 0 147 28 4 629 387 60 0 0 chr13 5831034 5831084 -114453228 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 4 629 312 298 113 9 chr13 5831828 5831943 -114452369 + ID_B1 SINE B4 86 212 -12 4 629 238 260 28 46 chr13 5831974 5832083 -114452229 + L1M3 LINE L1 5497 5603 -565 4 629 246 375 43 14 chr13 5832438 5832576 -114451736 + MLT1G1 LTR MaLR 102 243 -336 4 629 394 322 47 40 chr13 5832850 5832999 -114451313 - MLT1A0 LTR MaLR -12 353 204 4 629 529 296 40 6 chr13 5833156 5833333 -114450979 - B4 SINE B4 -3 289 107 4 629 217 51 51 0 chr13 5833920 5833959 -114450353 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 4 629 441 0 0 0 chr13 5834071 5834120 -114450192 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 629 642 241 165 16 chr13 5834122 5834316 -114449996 + ID_B1 SINE B4 1 223 -1 5 629 22 35 0 0 chr13 5834348 5834377 -114449935 + AT_rich Low_complexity Low_complexity 1 29 0 5 629 271 215 177 0 chr13 5834498 5834577 -114449735 - L1MA6 LINE L1 -51 6249 6157 5 629 908 264 61 33 chr13 5834577 5834995 -114449317 - MERVL_2A-int LTR ERVL -5267 494 1 5 629 1351 275 56 16 chr13 5835023 5835473 -114448839 - MT2A LTR ERVL -65 468 1 5 629 534 299 183 12 chr13 5836580 5837030 -114447282 - MLT1F1 LTR MaLR -4 575 28 5 629 803 251 36 31 chr13 5837155 5837317 -114446995 + ID_B1 SINE B4 1 162 -62 5 629 1145 279 54 35 chr13 5837317 5837689 -114446623 - MTE2b LTR MaLR 0 379 1 5 629 803 251 36 31 chr13 5837689 5837748 -114446564 + ID_B1 SINE B4 163 223 -1 5 629 545 317 52 98 chr13 5838427 5838478 -114445834 + MTD LTR MaLR 1 50 -369 5 629 977 150 209 0 chr13 5838478 5838665 -114445647 - URR1A DNA MER1_type 0 226 1 5 629 545 294 71 59 chr13 5838665 5839043 -114445269 + MTD LTR MaLR 51 387 -32 5 629 255 79 0 0 chr13 5839083 5839121 -114445191 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 629 242 164 18 0 chr13 5841641 5841696 -114442616 + GA-rich Low_complexity Low_complexity 4 59 0 5 629 237 196 0 0 chr13 5841829 5841880 -114442432 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 5 629 327 292 0 0 chr13 5841908 5842014 -114442298 + (CA)n Simple_repeat Simple_repeat 1 106 0 5 629 344 254 39 47 chr13 5842644 5842772 -114441540 - MIRb SINE MIR -58 210 84 5 629 441 125 518 7 chr13 5845464 5845601 -114438711 - B3 SINE B2 -9 207 1 5 629 25 0 0 0 chr13 5845614 5845639 -114438673 + AT_rich Low_complexity Low_complexity 1 25 0 5 629 189 0 0 0 chr13 5846493 5846514 -114437798 + (A)n Simple_repeat Simple_repeat 1 21 0 5 629 280 171 12 47 chr13 5848157 5848243 -114436069 + (TCTCTG)n Simple_repeat Simple_repeat 6 88 0 5 629 862 283 29 22 chr13 5848246 5848524 -114435788 - B4A SINE B4 -3 289 10 5 629 22 0 0 0 chr13 5849968 5849990 -114434322 + AT_rich Low_complexity Low_complexity 1 22 0 5 629 250 86 0 0 chr13 5850961 5850996 -114433316 - B3A SINE B2 -162 36 2 5 629 932 179 26 0 chr13 5851021 5851211 -114433101 - Lx5 LINE L1 0 7050 6856 5 629 271 195 12 24 chr13 5851834 5851918 -114432394 + GA-rich Low_complexity Low_complexity 1 83 0 5 629 513 218 40 0 chr13 5851950 5852208 -114432104 + GA-rich Low_complexity Low_complexity 1 268 0 5 629 974 150 0 11 chr13 5852234 5852416 -114431896 + GA-rich Low_complexity Low_complexity 1 180 0 5 629 868 311 7 26 chr13 5853076 5853347 -114430965 - B4A SINE B4 0 292 27 5 629 288 336 56 37 chr13 5853865 5854134 -114430178 - L1M5 LINE L1 -723 5721 5448 5 629 306 0 0 0 chr13 5854161 5854195 -114430117 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 629 245 268 0 40 chr13 5854948 5855022 -114429290 + L1MCc LINE L1 368 438 -5985 5 629 444 198 11 53 chr13 5855531 5855718 -114428594 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 5 629 259 160 0 20 chr13 5855719 5855770 -114428542 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 629 207 0 0 0 chr13 5856996 5857019 -114427293 + (TGG)n Simple_repeat Simple_repeat 2 24 0 5 629 1090 29 35 17 chr13 5857604 5857777 -114426535 + (TCTCCC)n Simple_repeat Simple_repeat 1 176 0 5 629 245 0 86 0 chr13 5857777 5857812 -114426500 + (TCCCC)n Simple_repeat Simple_repeat 4 41 0 5 629 892 59 2 30 chr13 5857950 5858085 -114426227 + B1_Mus1 SINE Alu 17 148 0 5 629 291 85 0 0 chr13 5858085 5858132 -114426180 + (CAAAA)n Simple_repeat Simple_repeat 4 50 0 5 629 1060 35 7 7 chr13 5858743 5858885 -114425427 + (TTC)n Simple_repeat Simple_repeat 3 144 0 5 629 180 0 0 0 chr13 5859551 5859571 -114424741 + (T)n Simple_repeat Simple_repeat 1 20 0 5 629 246 62 0 0 chr13 5863243 5863275 -114421037 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 629 543 69 0 0 chr13 5863278 5863350 -114420962 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 629 183 203 0 0 chr13 5867010 5867069 -114417243 + A-rich Low_complexity Low_complexity 2 60 0 5 629 297 89 0 0 chr13 5868148 5868193 -114416119 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 629 235 177 32 0 chr13 5868389 5868451 -114415861 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 5 629 23 0 0 0 chr13 5868452 5868475 -114415837 + AT_rich Low_complexity Low_complexity 1 23 0 5 629 207 0 0 0 chr13 5870212 5870235 -114414077 + (C)n Simple_repeat Simple_repeat 1 23 0 5 629 34 0 0 0 chr13 5871367 5871401 -114412911 + AT_rich Low_complexity Low_complexity 1 34 0 5 629 470 46 0 15 chr13 5871657 5871723 -114412589 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 629 516 32 0 0 chr13 5873602 5873664 -114410648 + (TC)n Simple_repeat Simple_repeat 2 63 0 5 629 183 129 0 0 chr13 5875710 5875741 -114408571 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 5 629 3049 280 37 20 chr13 5876072 5877022 -114407290 + RCHARR1 DNA MER1_type 9 974 0 5 629 213 39 0 0 chr13 5877798 5877824 -114406488 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 5 629 964 264 129 20 chr13 5877961 5878302 -114406010 - MTE2b LTR MaLR 0 379 2 5 629 229 229 0 0 chr13 5878889 5878937 -114405375 + T-rich Low_complexity Low_complexity 1 48 0 5 629 1417 234 47 33 chr13 5879977 5880339 -114403973 - ORR1D2 LTR MaLR 0 370 4 5 629 216 111 0 0 chr13 5880882 5880918 -114403394 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 629 299 254 14 0 chr13 5881573 5881644 -114402668 - PB1D10 SINE Alu -45 72 1 5 629 17767 4 0 0 chr13 5881832 5883787 -114400525 + L1Md_A LINE L1 3632 5586 -297 5 629 9175 4 0 0 chr13 5883787 5884782 -114399530 + L1Md_A LINE L1 5587 6581 -1 5 629 414 285 123 14 chr13 5885355 5885427 -114398885 + ID_B1 SINE B4 11 98 -126 5 629 230 252 226 28 chr13 5885427 5885533 -114398779 + PB1 SINE Alu 1 127 0 5 629 475 168 43 12 chr13 5887897 5888060 -114396252 + GA-rich Low_complexity Low_complexity 1 168 0 5 629 540 314 9 56 chr13 5889011 5889227 -114395085 + ID_B1 SINE B4 17 222 -2 5 629 306 0 0 0 chr13 5889619 5889653 -114394659 + (CAA)n Simple_repeat Simple_repeat 3 36 0 5 629 358 293 13 0 chr13 5889798 5889892 -114394420 + B4 SINE B4 2 97 -195 5 629 213 65 0 0 chr13 5891074 5891105 -114393207 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 629 520 319 176 16 chr13 5891109 5891354 -114392958 - B4 SINE B4 -8 284 1 5 629 284 325 8 16 chr13 5893163 5893288 -114391024 + CT-rich Low_complexity Low_complexity 4 127 0 5 629 508 267 14 43 chr13 5893289 5893430 -114390882 - ID_B1 SINE B4 -1 223 87 5 629 395 217 0 17 chr13 5893442 5893559 -114390753 + CT-rich Low_complexity Low_complexity 2 116 0 5 629 324 270 0 51 chr13 5893570 5893648 -114390664 - ID SINE ID -150 74 1 5 629 269 238 111 28 chr13 5893684 5893792 -114390520 - MLT1A0 LTR MaLR -36 329 213 5 629 387 0 0 0 chr13 5895496 5895539 -114388773 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 629 21 0 0 0 chr13 5895561 5895582 -114388730 + AT_rich Low_complexity Low_complexity 1 21 0 5 629 318 259 52 17 chr13 5895908 5896118 -114388194 + (TAGA)n Simple_repeat Simple_repeat 1 217 0 5 629 303 152 25 12 chr13 5896135 5896215 -114388097 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 5 629 358 204 21 0 chr13 5897333 5897426 -114386886 + GA-rich Low_complexity Low_complexity 3 97 0 5 629 591 378 32 39 chr13 5897592 5897873 -114386439 - B4A SINE B4 -12 280 2 5 629 197 284 101 42 chr13 5897994 5898159 -114386153 - MIR SINE MIR -50 212 34 5 630 818 335 21 59 chr13 5900289 5900578 -114383734 + B4 SINE B4 5 282 -10 5 630 616 296 146 0 chr13 5901460 5901659 -114382653 - B4A SINE B4 -64 228 1 5 630 3128 48 5 18 chr13 5902962 5903363 -114380949 - MTA_Mm LTR MaLR 0 396 1 5 630 851 53 38 0 chr13 5903363 5903495 -114380817 - MTA_Mm-int LTR MaLR 0 1098 962 5 630 32355 65 9 7 chr13 5903495 5908656 -114375656 + L1Md_F3 LINE L1 420 5586 -297 5 630 7979 38 8 2 chr13 5908656 5909634 -114374678 + L1Md_F3 LINE L1 5587 6570 -14 5 630 6679 82 3 78 chr13 5909636 5910690 -114373622 - MTA_Mm-int LTR MaLR -123 975 1 5 630 1416 72 311 0 chr13 5910690 5910992 -114373320 - MTA_Mm LTR MaLR 0 396 1 5 630 342 67 0 0 chr13 5911223 5911268 -114373044 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 5 630 214 250 39 24 chr13 5911270 5911397 -114372915 + (TA)n Simple_repeat Simple_repeat 1 129 0 5 630 368 273 50 0 chr13 5911405 5911504 -114372808 - MLT2B2 LTR ERVL -410 105 2 5 630 299 366 0 0 chr13 5911585 5911686 -114372626 + PB1D10 SINE Alu 3 103 -14 5 630 225 0 0 0 chr13 5911799 5911824 -114372488 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 630 354 154 0 0 chr13 5911824 5911902 -114372410 + GA-rich Low_complexity Low_complexity 1 78 0 5 630 349 324 69 55 chr13 5911921 5912195 -114372117 - B4A SINE B4 -10 282 5 5 630 205 174 0 42 chr13 5913298 5913346 -114370966 + (CAA)n Simple_repeat Simple_repeat 3 48 0 5 630 225 371 8 25 chr13 5913579 5913607 -114370705 + MIRb SINE MIR 115 142 -126 5 630 189 121 0 0 chr13 5913607 5913640 -114370672 + (CAT)n Simple_repeat Simple_repeat 2 34 0 5 630 225 371 8 25 chr13 5913640 5913730 -114370582 + MIRb SINE MIR 143 230 -38 5 630 22 0 0 0 chr13 5914308 5914330 -114369982 + AT_rich Low_complexity Low_complexity 1 22 0 5 630 267 93 0 0 chr13 5914337 5914380 -114369932 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 630 472 235 10 39 chr13 5914408 5914510 -114369802 - RSINE1 SINE B4 -60 105 7 5 630 294 246 0 16 chr13 5914753 5914815 -114369497 + B4 SINE B4 18 78 -214 5 630 511 237 73 15 chr13 5914857 5914994 -114369318 + B1_Mur1 SINE Alu 1 145 -4 5 630 256 257 157 0 chr13 5915049 5915119 -114369193 + B4 SINE B4 109 189 -103 5 630 588 65 0 0 chr13 5916917 5916994 -114367318 + (TCCC)n Simple_repeat Simple_repeat 4 80 0 5 630 203 256 0 0 chr13 5917351 5917394 -114366918 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 630 281 356 6 22 chr13 5918130 5918308 -114366004 + L1ME3B LINE L1 1900 2074 -4559 5 630 441 0 0 0 chr13 5918417 5918466 -114365846 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 630 530 317 93 34 chr13 5918497 5918765 -114365547 - B4A SINE B4 -7 285 2 5 630 522 273 33 0 chr13 5918813 5918934 -114365378 - ID_B1 SINE B4 -4 220 96 5 630 294 312 68 68 chr13 5918934 5918957 -114365355 - B1_Mur4 SINE Alu -1 145 2 6 630 480 298 95 43 chr13 5918961 5919310 -114365002 + L1ME3B LINE L1 2488 2867 -3670 5 630 539 272 40 71 chr13 5919353 5919551 -114364761 + B3A SINE B2 2 193 -2 6 630 608 200 199 6 chr13 5919753 5919914 -114364398 + MTD LTR MaLR 174 365 -54 6 630 357 289 113 7 chr13 5919995 5920317 -114363995 + L1ME3B LINE L1 3101 3453 -3084 5 630 378 0 0 0 chr13 5920414 5920456 -114363856 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 630 321 319 139 14 chr13 5920543 5920823 -114363489 + L1ME3B LINE L1 6066 6380 -251 5 630 793 182 14 20 chr13 5920908 5921054 -114363258 + B1_Mm SINE Alu 3 147 0 6 630 279 79 0 0 chr13 5921734 5921772 -114362540 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 630 215 228 17 17 chr13 5922290 5922348 -114361964 + GA-rich Low_complexity Low_complexity 1 58 0 6 630 344 395 8 30 chr13 5922398 5922531 -114361781 + B4A SINE B4 1 130 -162 6 630 345 24 0 0 chr13 5922590 5922632 -114361680 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 630 207 162 0 0 chr13 5923333 5923370 -114360942 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 630 1437 212 3 91 chr13 5923725 5924067 -114360245 - MTC LTR MaLR -8 413 102 6 630 7013 111 26 3 chr13 5924097 5925920 -114358392 + Lx LINE L1 4781 6648 -6 6 630 4759 187 58 32 chr13 5925913 5927098 -114357214 + Lx4B LINE L1 5826 7041 -17 6 630 470 219 12 3 chr13 5927102 5927214 -114357098 - MTC LTR MaLR -284 112 1 6 630 25 0 0 0 chr13 5927284 5927309 -114357003 + AT_rich Low_complexity Low_complexity 1 25 0 6 630 1357 212 147 3 chr13 5927645 5927972 -114356340 + ORR1D1 LTR MaLR 1 374 0 6 630 568 98 22 22 chr13 5928364 5928499 -114355813 + (TCTA)n Simple_repeat Simple_repeat 4 138 0 6 630 287 193 57 51 chr13 5928518 5928693 -114355619 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 6 630 472 265 76 62 chr13 5928935 5929080 -114355232 - B3 SINE B2 -68 148 2 6 630 319 345 124 47 chr13 5929098 5929162 -114355150 + MTE2a LTR MaLR 32 102 -319 6 630 492 18 0 0 chr13 5929162 5929219 -114355093 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 630 1048 283 54 14 chr13 5929219 5929516 -114354796 + MTE2a LTR MaLR 71 379 0 6 630 244 250 82 75 chr13 5930231 5930292 -114354020 - BC1_Mm scRNA scRNA -2 150 3 6 630 357 271 0 12 chr13 5930292 5930378 -114353934 - B4A SINE B4 -205 87 3 6 630 357 82 0 0 chr13 5930567 5930616 -114353696 + (TCCC)n Simple_repeat Simple_repeat 1 49 0 6 630 1398 50 0 6 chr13 5931898 5932079 -114352233 + L1Md_T LINE L1 6403 6582 0 6 630 796 124 7 7 chr13 5932513 5932651 -114351661 + (TCC)n Simple_repeat Simple_repeat 3 140 0 6 630 665 301 77 3 chr13 5934833 5935120 -114349192 - Lx8 LINE L1 -346 7127 6820 6 630 223 341 12 12 chr13 5935482 5935565 -114348747 + RSINE1 SINE B4 4 86 -79 6 630 708 198 0 0 chr13 5935499 5935610 -114348702 + B3 SINE B2 20 130 -86 6 630 502 172 0 0 chr13 5935885 5935984 -114348328 - Lx LINE L1 -7 6647 6549 6 630 257 273 45 15 chr13 5935992 5936059 -114348253 - B1F1 SINE Alu -49 100 32 6 630 421 331 0 8 chr13 5936109 5936234 -114348078 + PB1 SINE Alu 1 124 -3 6 630 266 250 8 0 chr13 5937059 5937179 -114347133 + (CA)n Simple_repeat Simple_repeat 2 122 0 6 630 237 283 17 26 chr13 5937179 5937295 -114347017 + (CATA)n Simple_repeat Simple_repeat 3 117 0 6 630 1282 204 173 52 chr13 5937295 5937625 -114346687 + ORR1D2 LTR MaLR 1 370 0 6 630 219 114 0 0 chr13 5937768 5937803 -114346509 + (GGA)n Simple_repeat Simple_repeat 3 37 0 6 630 249 83 0 0 chr13 5938242 5938278 -114346034 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 6 630 696 144 0 25 chr13 5939376 5939497 -114344815 - RMER19B LTR ERVK 0 902 785 6 630 1615 192 73 36 chr13 5939484 5939840 -114344472 + RLTR20B1 LTR ERVK 76 444 -119 6 630 654 37 0 0 chr13 5939840 5939921 -114344391 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 6 630 3666 176 124 17 chr13 5939921 5940636 -114343676 - RMER19B LTR ERVK -110 792 1 6 630 570 29 0 0 chr13 5940878 5940946 -114343366 + (TC)n Simple_repeat Simple_repeat 1 68 0 6 630 257 309 78 26 chr13 5942196 5942349 -114341963 - Lx8 LINE L1 -567 6906 6746 6 630 24 0 0 0 chr13 5942808 5942832 -114341480 + AT_rich Low_complexity Low_complexity 1 24 0 6 630 237 343 15 7 chr13 5943045 5943180 -114341132 + (TG)n Simple_repeat Simple_repeat 1 136 0 6 630 243 88 0 0 chr13 5944275 5944309 -114340003 + (A)n Simple_repeat Simple_repeat 1 34 0 6 630 706 240 28 132 chr13 5944772 5944850 -114339462 + ID SINE ID 1 78 -146 6 630 315 130 0 0 chr13 5944850 5944904 -114339408 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 6 630 706 240 28 132 chr13 5944904 5945012 -114339300 + ID_B1 SINE B4 79 170 -54 6 630 1076 250 84 42 chr13 5945012 5945367 -114338945 - ORR1D1 LTR MaLR -4 370 1 6 630 706 240 28 132 chr13 5945367 5945429 -114338883 + ID_B1 SINE B4 171 224 0 6 630 348 208 232 0 chr13 5946482 5946607 -114337705 + B4A SINE B4 7 160 -132 6 630 468 0 0 0 chr13 5946710 5946762 -114337550 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 630 393 235 28 101 chr13 5947056 5947165 -114337147 + PB1 SINE Alu 21 121 -6 6 630 531 329 12 0 chr13 5947189 5947435 -114336877 + L1MA4 LINE L1 5677 5925 -375 6 630 190 200 31 0 chr13 5947447 5947468 -114336844 + (TA)n Simple_repeat Simple_repeat 2 24 0 6 630 405 58 0 0 chr13 5947468 5947520 -114336792 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 630 190 200 31 0 chr13 5947520 5947563 -114336749 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 630 23 54 0 0 chr13 5947717 5947754 -114336558 + AT_rich Low_complexity Low_complexity 1 37 0 6 630 467 207 0 11 chr13 5947816 5947997 -114336315 + GA-rich Low_complexity Low_complexity 2 180 0 6 630 180 154 45 15 chr13 5948020 5948086 -114336226 + (CAGAGA)n Simple_repeat Simple_repeat 4 71 0 6 630 340 289 0 12 chr13 5949549 5949633 -114334679 - BC1_Mm scRNA scRNA -64 88 6 6 630 27 29 0 0 chr13 5949959 5949993 -114334319 + AT_rich Low_complexity Low_complexity 1 34 0 6 630 819 322 61 23 chr13 5950431 5950873 -114333439 + Lx8 LINE L1 6806 7264 -209 6 630 956 309 120 28 chr13 5951163 5951489 -114332823 - MTEb LTR MaLR -23 356 1 6 630 906 269 16 99 chr13 5951489 5951787 -114332525 + MTEa LTR MaLR 108 379 0 6 630 207 314 122 44 chr13 5952740 5952920 -114331392 + L2 LINE L2 1951 2144 -1275 6 630 527 321 20 45 chr13 5952932 5953134 -114331178 - B3A SINE B2 -1 197 1 6 630 335 73 0 51 chr13 5953699 5953758 -114330554 + L1_Mus1 LINE L1 6347 6433 -205 6 630 629 93 8 25 chr13 5953748 5953869 -114330443 + L1Md_F2 LINE L1 6462 6580 -2 6 630 596 311 32 37 chr13 5953876 5954093 -114330219 - ID_B1 SINE B4 -7 217 2 6 630 470 328 0 0 chr13 5954394 5954568 -114329744 + (CATCC)n Simple_repeat Simple_repeat 5 178 0 6 630 508 378 25 30 chr13 5954583 5954989 -114329323 + ERVL-E-int LTR ERVL 2285 2688 -2979 6 630 272 324 19 132 chr13 5955409 5955752 -114328560 - MTEb LTR MaLR -18 361 1 6 630 317 283 52 67 chr13 5955823 5956016 -114328296 + ERVL-E-int LTR ERVL 3370 3559 -2198 6 630 236 407 7 14 chr13 5956399 5956541 -114327771 - ORR1C2 LTR MaLR -243 141 1 6 630 714 24 0 0 chr13 5957270 5957354 -114326958 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 6 630 12426 68 5 2 chr13 5957356 5959793 -114324519 - L1Md_F2 LINE L1 -12 6570 4128 6 630 7623 114 7 1 chr13 5959791 5961676 -114322636 - L1Md_F2 LINE L1 -3580 2303 451 6 630 578 325 62 10 chr13 5961702 5961968 -114322344 - Lx8 LINE L1 -341 7132 6858 6 630 248 0 0 30 chr13 5961968 5962001 -114322311 + (CAAAC)n Simple_repeat Simple_repeat 3 34 0 6 630 578 325 62 10 chr13 5962001 5962026 -114322286 - Lx8 LINE L1 -616 6857 6828 6 630 227 351 53 25 chr13 5962078 5962212 -114322100 + MIRb SINE MIR 2 143 -125 6 630 532 339 87 43 chr13 5962356 5962547 -114321765 + B4 SINE B4 27 236 -56 6 630 2607 118 40 26 chr13 5962547 5962974 -114321338 - Lx LINE L1 -2 6652 6220 6 630 532 339 87 43 chr13 5962974 5963035 -114321277 + B4 SINE B4 237 290 -2 6 630 192 77 0 0 chr13 5963059 5963085 -114321227 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 630 788 250 60 0 chr13 5963172 5963356 -114320956 + B3 SINE B2 18 212 -4 6 630 512 189 7 0 chr13 5965693 5965841 -114318471 + CT-rich Low_complexity Low_complexity 2 150 0 6 630 498 327 50 100 chr13 5965924 5966223 -114318089 - B4A SINE B4 0 292 9 6 630 534 352 82 75 chr13 5967561 5967843 -114316469 - B4A SINE B4 -8 284 1 6 630 1099 248 163 21 chr13 5968250 5968576 -114315736 - MTEa LTR MaLR -3 376 5 6 630 558 150 0 0 chr13 5968594 5968714 -114315598 + (TC)n Simple_repeat Simple_repeat 1 120 0 6 630 242 29 29 0 chr13 5968714 5968749 -114315563 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 630 21 89 0 0 chr13 5969713 5969769 -114314543 + AT_rich Low_complexity Low_complexity 1 56 0 6 630 240 35 0 0 chr13 5969825 5969854 -114314458 + (A)n Simple_repeat Simple_repeat 1 29 0 6 630 306 268 22 39 chr13 5970129 5970276 -114314036 + CT-rich Low_complexity Low_complexity 1 144 0 6 630 230 349 24 0 chr13 5970369 5970452 -114313860 + ORR1E LTR MaLR 275 359 0 6 630 1028 116 7 0 chr13 5971151 5971298 -114313014 + B1_Mus1 SINE Alu 1 148 0 6 630 291 253 0 0 chr13 5971301 5971380 -114312932 + GA-rich Low_complexity Low_complexity 2 80 0 6 630 251 202 64 0 chr13 5971876 5971985 -114312327 + Lx9 LINE L1 7514 7629 -15 6 630 264 59 0 0 chr13 5972027 5972061 -114312251 + (TATG)n Simple_repeat Simple_repeat 2 35 0 6 630 1036 274 73 46 chr13 5972119 5972487 -114311825 + MTD LTR MaLR 42 419 0 6 630 951 265 97 23 chr13 5973670 5974021 -114310291 - MTE2b LTR MaLR 0 379 3 6 630 450 218 27 0 chr13 5974264 5974374 -114309938 - PB1D9 SINE Alu -6 114 2 6 630 198 0 0 0 chr13 5974505 5974527 -114309785 + (T)n Simple_repeat Simple_repeat 1 22 0 6 630 680 324 23 19 chr13 5974567 5974583 -114309729 - B4 SINE B4 -6 286 271 6 630 621 96 0 0 chr13 5974583 5974677 -114309635 + (TG)n Simple_repeat Simple_repeat 1 94 0 6 630 680 324 23 19 chr13 5974677 5974864 -114309448 - B4 SINE B4 -22 270 83 6 630 1450 260 60 13 chr13 5974864 5975250 -114309062 + MTD LTR MaLR 1 404 -15 6 630 343 19 0 0 chr13 5975482 5975535 -114308777 + L1_Mus4 LINE L1 6579 6631 -5 7 630 1107 165 117 31 chr13 5975538 5975794 -114308518 + Lx2B LINE L1 6723 7000 0 7 630 180 0 0 0 chr13 5975807 5975827 -114308485 + (A)n Simple_repeat Simple_repeat 1 20 0 7 630 378 242 15 5 chr13 5976117 5976203 -114308109 - B1F SINE Alu -24 126 40 7 630 708 264 104 40 chr13 5978357 5978558 -114305754 + ID_B1 SINE B4 1 214 -10 7 630 351 0 0 0 chr13 5978558 5978597 -114305715 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 630 249 57 0 0 chr13 5978605 5978640 -114305672 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 7 630 981 262 69 30 chr13 5979690 5980049 -114304263 + RMER15 LTR ERVL 88 512 -63 7 630 4657 95 25 8 chr13 5980662 5981332 -114302980 + L1_Mus3 LINE L1 5957 6638 0 7 630 473 300 93 0 chr13 5981344 5981484 -114302828 + RSINE1 SINE B4 3 155 -10 7 630 969 327 86 8 chr13 5981641 5982243 -114302069 - Ricksha_0 DNA MuDR -912 821 173 7 630 465 195 0 0 chr13 5983191 5983278 -114301034 + MLT1A1 LTR MaLR 322 408 0 7 630 382 348 58 40 chr13 5983661 5983967 -114300345 - B4 SINE B4 -17 275 2 7 630 995 268 73 29 chr13 5984345 5984618 -114299694 + ORR1D2 LTR MaLR 4 288 -86 7 630 222 37 0 0 chr13 5984634 5984661 -114299651 + (TTTAA)n Simple_repeat Simple_repeat 1 27 0 7 630 260 302 139 0 chr13 5984661 5984747 -114299565 - MTEb LTR MaLR -30 349 252 7 630 280 250 50 0 chr13 5984755 5984835 -114299477 + ORR1D2 LTR MaLR 336 419 0 7 630 342 0 0 0 chr13 5984961 5984999 -114299313 + (T)n Simple_repeat Simple_repeat 1 38 0 7 630 241 222 265 29 chr13 5985041 5985143 -114299169 - ORR1E LTR MaLR -5 354 229 7 630 943 270 47 20 chr13 5985265 5985518 -114298794 + MTEa LTR MaLR 5 264 -115 7 630 333 0 0 0 chr13 5986269 5986306 -114298006 + (TC)n Simple_repeat Simple_repeat 2 38 0 7 630 369 0 0 0 chr13 5986306 5986346 -114297966 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 630 417 86 0 0 chr13 5986568 5986626 -114297686 + (TGAG)n Simple_repeat Simple_repeat 4 61 0 7 630 431 325 153 31 chr13 5986788 5987271 -114297041 + L1MC4 LINE L1 7196 7737 -305 7 630 198 191 0 0 chr13 5987476 5987518 -114296794 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 630 855 55 0 0 chr13 5987568 5987677 -114296635 + (GAAAA)n Simple_repeat Simple_repeat 2 110 0 7 630 209 272 175 0 chr13 5987840 5987954 -114296358 - MIRb SINE MIR -112 156 23 7 630 4180 194 71 38 chr13 5988307 5988534 -114295778 - RLTR25B LTR ERVK 0 1028 815 7 630 378 94 0 0 chr13 5988534 5988598 -114295714 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 630 4180 194 71 38 chr13 5988598 5988648 -114295664 - RLTR25B LTR ERVK -214 814 779 7 630 702 11 32 0 chr13 5988648 5988743 -114295569 + (CAAAA)n Simple_repeat Simple_repeat 3 100 0 7 630 4180 194 71 38 chr13 5988743 5989459 -114294853 - RLTR25B LTR ERVK -250 778 2 7 630 650 312 21 30 chr13 5990386 5990621 -114293691 + B4 SINE B4 3 227 -65 7 630 189 0 0 0 chr13 5990772 5990793 -114293519 + (T)n Simple_repeat Simple_repeat 1 21 0 7 630 939 217 19 10 chr13 5992977 5993182 -114291130 - B3 SINE B2 -9 207 1 7 630 277 274 95 0 chr13 5993369 5993453 -114290859 + PB1D10 SINE Alu 17 108 -9 7 630 184 379 77 21 chr13 5993625 5993768 -114290544 + MIRb SINE MIR 40 190 -78 7 630 240 102 82 0 chr13 5994139 5994188 -114290124 - L1MC LINE L1 -2172 5613 5561 7 630 200 262 0 24 chr13 5994234 5994316 -114289996 + CT-rich Low_complexity Low_complexity 4 83 0 7 630 251 320 10 0 chr13 5994339 5994442 -114289870 - L1M3 LINE L1 -683 5491 5388 7 630 507 211 0 9 chr13 5994586 5994701 -114289611 - Lx4A LINE L1 -6 7052 6939 7 630 225 336 88 55 chr13 5994898 5995445 -114288867 - L1M3 LINE L1 -1195 4951 4387 7 630 306 295 78 70 chr13 5995763 5996295 -114288017 - L1M3 LINE L1 -2107 4039 3502 7 630 1572 32 21 0 chr13 5996295 5996484 -114287828 - B2_Mm1t SINE B2 0 193 1 7 630 407 194 52 53 chr13 5996488 5996659 -114287653 - RMER1C Other Other 0 1342 1216 7 630 350 102 34 0 chr13 5996699 5996758 -114287554 + (TATG)n Simple_repeat Simple_repeat 4 64 0 7 630 438 94 0 0 chr13 5996762 5996826 -114287486 + (CA)n Simple_repeat Simple_repeat 2 65 0 7 630 1761 263 79 48 chr13 5996849 5996952 -114287360 - RMER1C Other Other -207 1135 1040 7 630 813 219 11 17 chr13 5996952 5997133 -114287179 + Lx4A LINE L1 6879 7058 0 7 630 1761 263 79 48 chr13 5997133 5997635 -114286677 - RMER1C Other Other -303 1039 511 7 630 517 14 29 0 chr13 5997706 5997776 -114286536 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 7 630 240 301 99 35 chr13 5998015 5998156 -114286156 - Lx9 LINE L1 -1137 6507 6358 7 630 331 299 9 76 chr13 5998697 5998802 -114285510 + RSINE1 SINE B4 68 165 0 7 630 308 250 28 0 chr13 5999360 5999432 -114284880 - ID4 SINE ID -6 77 4 7 630 369 219 94 31 chr13 5999466 5999593 -114284719 - B1F SINE Alu -14 135 1 7 630 223 368 52 71 chr13 5999718 5999873 -114284439 - MIR SINE MIR -74 188 37 7 630 379 289 11 11 chr13 6000799 6000890 -114283422 + PB1D10 SINE Alu 6 96 -21 1 630 339 89 0 0 chr13 6000919 6000975 -114283337 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 630 315 0 0 0 chr13 6000975 6001010 -114283302 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 630 1034 86 7 0 chr13 6002114 6002265 -114282047 + (TC)n Simple_repeat Simple_repeat 1 152 0 4 630 223 279 161 26 chr13 6002808 6002976 -114281336 + MIRm SINE MIR 17 199 -77 5 630 765 308 102 6 chr13 6003231 6003576 -114280736 + MLT1B LTR MaLR 1 461 -6 6 630 267 273 133 47 chr13 6004329 6004479 -114279833 - L2a LINE L2 0 3426 3264 7 630 465 47 0 0 chr13 6004610 6004674 -114279638 - L1Md_F2 LINE L1 -12 6570 6507 8 630 521 297 108 16 chr13 6004675 6004916 -114279396 - B4 SINE B4 -23 269 10 9 630 21 36 0 0 chr13 6004971 6004999 -114279313 + AT_rich Low_complexity Low_complexity 1 28 0 1 630 243 281 142 29 chr13 6005001 6005102 -114279210 - L1M2 LINE L1 -389 5902 5796 1 630 438 108 0 0 chr13 6005102 6005167 -114279145 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 630 243 281 142 29 chr13 6005167 6005270 -114279042 - L1M2 LINE L1 -496 5795 5675 1 630 302 332 84 118 chr13 6005273 6005628 -114278684 - MLT1F2 LTR MaLR -160 400 58 1 630 626 267 14 0 chr13 6005959 6006105 -114278207 + B1F SINE Alu 1 148 -1 1 630 263 298 72 31 chr13 6006111 6006208 -114278104 + B3 SINE B2 10 110 -106 1 630 234 256 135 60 chr13 6006208 6006243 -114278069 + B4 SINE B4 10 151 -141 1 630 3018 205 14 2 chr13 6006943 6007506 -114276806 + RMER15 LTR ERVL 6 575 0 1 630 33 56 0 0 chr13 6007708 6007762 -114276550 + AT_rich Low_complexity Low_complexity 1 54 0 1 630 797 252 71 0 chr13 6007811 6007898 -114276414 - Lx9 LINE L1 -52 7592 7497 1 630 267 103 0 0 chr13 6007898 6007937 -114276375 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 630 797 252 71 0 chr13 6007937 6008115 -114276197 - Lx9 LINE L1 -148 7496 7309 1 630 472 319 16 10 chr13 6008119 6008312 -114276000 + Lx9 LINE L1 7096 7289 -355 1 630 21 36 0 0 chr13 6008332 6008360 -114275952 + AT_rich Low_complexity Low_complexity 1 28 0 2 630 251 349 0 76 chr13 6008388 6008506 -114275806 - PB1D10 SINE Alu -8 109 1 2 630 581 313 68 53 chr13 6009216 6009583 -114274729 - ORR1E LTR MaLR 0 379 1 2 630 253 305 98 14 chr13 6010622 6010765 -114273547 - L1MA6 LINE L1 -1 6299 6145 2 630 720 319 30 44 chr13 6011897 6012192 -114272120 + B4A SINE B4 1 291 -1 2 630 399 41 0 0 chr13 6012192 6012241 -114272071 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 630 182 286 80 48 chr13 6013537 6013662 -114270650 - L3 LINE CR1 -1897 2592 2464 2 630 399 21 0 0 chr13 6013803 6013851 -114270461 + (CATA)n Simple_repeat Simple_repeat 1 48 0 2 630 301 303 134 24 chr13 6013853 6014100 -114270212 + B4A SINE B4 1 274 -18 2 630 450 215 40 4 chr13 6014142 6014291 -114270021 + MER34 LTR ERV1 349 505 -66 3 630 267 262 12 24 chr13 6014891 6014973 -114269339 + GA-rich Low_complexity Low_complexity 3 83 0 3 630 2743 238 118 137 chr13 6014973 6016190 -114268122 + MTC-int LTR MaLR 37 1229 -29 3 630 1094 214 103 15 chr13 6016186 6016457 -114267855 + MTD LTR MaLR 66 360 -59 3 630 336 247 14 0 chr13 6017076 6017149 -114267163 + ID4 SINE ID 4 77 -6 3 630 180 184 0 0 chr13 6017246 6017295 -114267017 + CT-rich Low_complexity Low_complexity 1 49 0 3 630 375 23 0 0 chr13 6017901 6017945 -114266367 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 630 699 225 0 48 chr13 6018183 6018328 -114265984 - B1_Mur1 SINE Alu -2 147 10 3 630 488 176 16 23 chr13 6018443 6018571 -114265741 + CT-rich Low_complexity Low_complexity 3 129 0 3 630 180 0 0 0 chr13 6018759 6018779 -114265533 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 630 413 292 89 63 chr13 6019478 6019748 -114264564 - HAL1 LINE L1 -814 1693 1417 4 630 269 374 59 78 chr13 6020641 6020911 -114263401 + B4 SINE B4 3 267 -25 4 630 216 111 0 0 chr13 6020924 6020960 -114263352 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 630 1062 24 0 0 chr13 6021072 6021197 -114263115 + (GGGAA)n Simple_repeat Simple_repeat 2 126 0 4 630 300 351 0 18 chr13 6021268 6021381 -114262931 + MER5A1 DNA MER1_type 51 161 -5 4 630 22 0 0 0 chr13 6021851 6021873 -114262439 + AT_rich Low_complexity Low_complexity 1 22 0 4 630 256 333 65 54 chr13 6022981 6023165 -114261147 + ORR1E LTR MaLR 64 249 -110 4 630 450 326 62 34 chr13 6023568 6023714 -114260598 + RSINE1 SINE B4 8 157 -8 4 630 642 306 33 94 chr13 6024444 6024689 -114259623 + B4 SINE B4 2 231 -61 4 630 369 93 0 0 chr13 6024719 6024773 -114259539 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 630 432 0 0 0 chr13 6026257 6026305 -114258007 + (TATAG)n Simple_repeat Simple_repeat 4 51 0 5 630 541 345 48 30 chr13 6027705 6027974 -114256338 + B4A SINE B4 2 275 -17 5 630 423 0 0 0 chr13 6027995 6028042 -114256270 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 78 494 271 11 38 chr13 6029135 6029319 -114254993 + CT-rich Low_complexity Low_complexity 1 179 0 5 631 696 339 69 0 chr13 6029481 6029770 -114254542 - MLT1J LTR MaLR -183 329 21 5 631 34 42 0 0 chr13 6030069 6030117 -114254195 + AT_rich Low_complexity Low_complexity 1 48 0 5 631 306 0 0 0 chr13 6030535 6030569 -114253743 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 631 788 305 30 19 chr13 6031730 6031994 -114252318 - RMER15 LTR ERVL -14 561 295 5 631 415 255 46 78 chr13 6032026 6032179 -114252133 - RMER15 LTR ERVL -425 150 3 5 631 222 138 52 0 chr13 6032356 6032414 -114251898 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 631 181 318 16 16 chr13 6032941 6033005 -114251307 - L2 LINE L2 -1177 2242 2179 5 631 533 15 0 15 chr13 6033586 6033653 -114250659 + (TGG)n Simple_repeat Simple_repeat 3 68 0 6 631 268 213 16 0 chr13 6033666 6033727 -114250585 - MTC LTR MaLR -358 63 2 6 631 536 273 26 95 chr13 6033945 6034135 -114250177 + B3A SINE B2 20 196 -2 6 631 470 261 21 35 chr13 6034690 6034833 -114249479 + B3 SINE B2 1 141 -75 6 631 486 0 0 0 chr13 6035827 6035881 -114248431 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 6 631 1337 122 14 9 chr13 6035893 6036108 -114248204 - L1Md_F2 LINE L1 -10 6572 6357 6 631 216 0 0 0 chr13 6036194 6036218 -114248094 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 631 615 278 0 0 chr13 6036219 6036352 -114247960 - RSINE1 SINE B4 -30 135 3 6 631 377 308 38 0 chr13 6036603 6036762 -114247550 + L1M5 LINE L1 5268 5432 -692 6 631 465 236 31 39 chr13 6037102 6037230 -114247082 + B1F SINE Alu 1 127 -22 6 631 254 284 25 0 chr13 6037265 6037346 -114246966 + ID4 SINE ID 1 83 0 7 631 198 0 0 0 chr13 6037442 6037464 -114246848 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 7 631 312 102 0 0 chr13 6037600 6037649 -114246663 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 631 696 130 17 27 chr13 6038979 6039153 -114245159 - RMER1B Other Other -11 1055 860 7 631 395 328 14 106 chr13 6040255 6040473 -114243839 - B3A SINE B2 0 198 1 7 631 1125 32 6 25 chr13 6040492 6040652 -114243660 + (TCCC)n Simple_repeat Simple_repeat 4 160 0 7 631 274 219 0 86 chr13 6040656 6040726 -114243586 - B1F SINE Alu 0 149 86 7 631 1111 296 75 36 chr13 6042951 6043312 -114241000 - MTE2b LTR MaLR 0 379 5 7 631 21 0 0 0 chr13 6044227 6044248 -114240064 + AT_rich Low_complexity Low_complexity 1 21 0 7 631 501 160 217 0 chr13 6044603 6044709 -114239603 - ORR1C2 LTR MaLR -80 304 176 7 631 503 101 16 48 chr13 6044761 6044886 -114239426 + (CAGA)n Simple_repeat Simple_repeat 2 122 0 8 631 429 20 0 0 chr13 6044922 6044972 -114239340 + (GA)n Simple_repeat Simple_repeat 2 51 0 8 631 737 216 5 60 chr13 6044974 6045162 -114239150 - ORR1C2 LTR MaLR -221 163 1 7 631 425 295 11 2 chr13 6045170 6045281 -114239031 - ID_B1 SINE B4 -48 176 69 8 631 566 297 134 31 chr13 6047385 6047705 -114236607 + ORR1E LTR MaLR 1 353 -6 8 631 798 11 0 0 chr13 6049126 6049217 -114235095 + (TTC)n Simple_repeat Simple_repeat 2 92 0 8 631 1042 78 6 25 chr13 6049219 6049377 -114234935 - L1Md_F2 LINE L1 -19 6563 6409 8 631 351 296 133 133 chr13 6049462 6049747 -114234565 + B4A SINE B4 7 291 -1 8 631 648 233 0 64 chr13 6051126 6051282 -114233030 - B1_Mus1 SINE Alu 0 148 3 8 631 3471 77 11 0 chr13 6051542 6052193 -114232119 - L1_Mus1 LINE L1 -493 6074 5418 8 631 3730 61 6 2 chr13 6052193 6052668 -114231644 + L1_Mus1 LINE L1 6091 6567 0 8 631 995 61 0 0 chr13 6052668 6052816 -114231496 + MusHAL1 LINE L1 2562 2709 -3 8 631 195 184 0 0 chr13 6052857 6052895 -114231417 + (TATG)n Simple_repeat Simple_repeat 1 38 0 9 631 557 299 107 8 chr13 6052909 6053162 -114231150 - B4 SINE B4 -10 282 5 9 631 216 0 0 0 chr13 6053567 6053591 -114230721 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 631 22 35 0 0 chr13 6054043 6054072 -114230240 + AT_rich Low_complexity Low_complexity 1 29 0 9 631 190 56 56 0 chr13 6054404 6054440 -114229872 + (TTAA)n Simple_repeat Simple_repeat 3 40 0 9 631 290 308 0 0 chr13 6054830 6054908 -114229404 + ID4_ SINE ID 6 83 0 9 631 297 51 0 0 chr13 6054988 6055027 -114229285 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 631 274 401 68 34 chr13 6055100 6055247 -114229065 - B4A SINE B4 -139 153 2 9 631 2095 109 19 3 chr13 6055326 6055648 -114228664 - ORR1A4 LTR MaLR -2 327 1 9 631 703 261 37 53 chr13 6055875 6056065 -114228247 - B3A SINE B2 -6 192 6 9 631 27 49 0 0 chr13 6056817 6056858 -114227454 + AT_rich Low_complexity Low_complexity 1 41 0 1 631 304 365 59 14 chr13 6057270 6057492 -114226820 + MLT1A1 LTR MaLR 1 232 -176 1 631 210 167 0 23 chr13 6059611 6059654 -114224658 + C-rich Low_complexity Low_complexity 6 47 0 1 631 2361 179 5 16 chr13 6060286 6060712 -114223600 + MTC LTR MaLR 1 421 0 1 631 267 259 12 24 chr13 6060723 6060806 -114223506 - ID4 SINE ID 0 83 2 1 631 642 228 86 6 chr13 6061577 6061740 -114222572 - MTE2a LTR MaLR 0 379 204 1 631 668 237 7 13 chr13 6061726 6061880 -114222432 - RMER5 LTR ERV1 -363 171 19 1 631 413 258 339 6 chr13 6061877 6062045 -114222267 - MTE2a LTR MaLR -154 225 2 1 631 1125 147 65 28 chr13 6062103 6062320 -114221992 + URR1A DNA MER1_type 2 226 0 1 631 774 178 13 33 chr13 6063162 6063313 -114220999 + B1_Mur3 SINE Alu 2 149 0 1 631 499 307 8 8 chr13 6063486 6063614 -114220698 + RSINE1 SINE B4 2 129 -36 1 631 785 157 0 7 chr13 6063884 6064038 -114220274 + CT-rich Low_complexity Low_complexity 3 155 0 1 631 462 101 0 0 chr13 6064309 6064378 -114219934 + (TCC)n Simple_repeat Simple_repeat 2 70 0 1 631 246 327 37 50 chr13 6064867 6065028 -114219284 + RLTR14 LTR ERV1 224 382 0 1 631 492 333 39 0 chr13 6065218 6065347 -114218965 - B3A SINE B2 -64 134 1 1 631 635 341 69 40 chr13 6066317 6066693 -114217619 - MLT1D LTR MaLR -15 490 104 1 631 1833 157 136 3 chr13 6066910 6067249 -114217063 + ORR1C2 LTR MaLR 1 384 0 1 631 278 347 168 34 chr13 6067346 6067495 -114216817 - B3A SINE B2 -29 169 1 1 631 699 139 0 0 chr13 6067526 6067641 -114216671 + (CAT)n Simple_repeat Simple_repeat 3 117 0 1 631 408 277 53 0 chr13 6068121 6068215 -114216097 - RSINE1 SINE B4 -48 117 19 1 631 627 257 7 14 chr13 6068664 6068882 -114215430 - L1MA4 LINE L1 -400 5900 5684 1 631 21 0 0 0 chr13 6069428 6069449 -114214863 + AT_rich Low_complexity Low_complexity 1 21 0 1 631 649 304 64 38 chr13 6069668 6070007 -114214305 + Lx8 LINE L1 6690 7064 -409 1 631 5677 77 22 12 chr13 6070010 6070810 -114213502 + RLTR13C2 LTR ERVK 1 808 0 1 631 22 35 0 0 chr13 6072527 6072556 -114211756 + AT_rich Low_complexity Low_complexity 1 29 0 1 631 1047 293 78 9 chr13 6074667 6074998 -114209314 + MTD LTR MaLR 1 354 -65 1 631 513 287 111 17 chr13 6075044 6075225 -114209087 + ID_B1 SINE B4 15 212 -12 1 631 744 94 0 0 chr13 6075726 6075832 -114208480 + (TTTC)n Simple_repeat Simple_repeat 1 106 0 1 631 980 61 8 0 chr13 6075834 6075966 -114208346 + (TTC)n Simple_repeat Simple_repeat 2 134 0 1 631 401 347 48 92 chr13 6076088 6076482 -114207830 - ORR1E LTR MaLR -4 366 1 1 631 324 0 0 0 chr13 6077051 6077087 -114207225 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 631 2286 132 2 38 chr13 6078548 6078942 -114205370 - Lx4A LINE L1 -505 6553 6174 1 631 1551 106 8 0 chr13 6079033 6079270 -114205042 + Lx4A LINE L1 6553 6791 -267 1 631 378 191 0 0 chr13 6079299 6079388 -114204924 - Lx LINE L1 -2 6652 6564 1 631 382 128 32 11 chr13 6079392 6079487 -114204825 - L1_Mur2 LINE L1 -558 5319 5223 1 631 779 149 70 11 chr13 6079472 6079656 -114204656 + L1_Mur2 LINE L1 5004 5203 -680 1 631 432 0 0 0 chr13 6079684 6079732 -114204580 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 631 306 0 0 0 chr13 6079821 6079855 -114204457 + (T)n Simple_repeat Simple_repeat 1 34 0 1 631 293 360 0 35 chr13 6079856 6079971 -114204341 - RMER15 LTR ERVL -94 481 371 1 631 229 335 176 6 chr13 6079971 6080130 -114204182 - Lx8 LINE L1 -241 7232 7047 1 631 21 57 0 0 chr13 6080173 6080208 -114204104 + AT_rich Low_complexity Low_complexity 1 35 0 1 631 355 272 60 80 chr13 6080225 6080325 -114203987 - B3A SINE B2 -100 98 1 1 631 2277 219 140 55 chr13 6080825 6081727 -114202585 + RMER1B Other Other 1 1066 0 1 631 228 35 0 0 chr13 6082065 6082094 -114202218 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 631 872 261 71 133 chr13 6082130 6082484 -114201828 - MTE2a LTR MaLR -43 336 5 1 631 918 256 85 19 chr13 6083315 6083526 -114200786 + B4 SINE B4 68 292 0 1 631 279 269 45 76 chr13 6083785 6083942 -114200370 + CR1_Mam LINE CR1 2028 2179 -25 1 631 375 281 41 27 chr13 6086075 6086228 -114198084 - B2_Mm1t SINE B2 -37 158 9 1 631 378 323 23 30 chr13 6086630 6086761 -114197551 - MER58B DNA MER1_type -25 316 187 1 631 225 0 0 0 chr13 6086761 6086786 -114197526 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 631 231 180 123 57 chr13 6086976 6087018 -114197294 - RMER17D LTR ERVK -382 507 461 1 631 279 0 0 0 chr13 6087018 6087049 -114197263 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 631 324 0 0 0 chr13 6087049 6087084 -114197228 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 631 231 180 123 57 chr13 6087084 6087146 -114197166 - RMER17D LTR ERVK -429 460 396 1 631 1682 272 59 32 chr13 6087171 6087696 -114196616 - RMER15 LTR ERVL -34 541 3 1 631 1122 101 0 0 chr13 6088190 6088338 -114195974 - B1_Mus1 SINE Alu 0 148 1 1 631 414 0 0 0 chr13 6088396 6088442 -114195870 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 631 509 266 182 32 chr13 6088545 6088844 -114195468 + ORR1E LTR MaLR 2 354 -5 1 631 290 330 43 26 chr13 6089154 6089269 -114195043 - LTR78 LTR ERV1 -914 390 274 1 631 1393 185 77 29 chr13 6089749 6090099 -114194213 - ORR1B2 LTR MaLR 0 367 1 1 631 266 301 79 50 chr13 6090401 6090541 -114193771 + YREP_Mm Unknown Unknown 151 294 -1518 1 631 479 296 56 0 chr13 6090440 6090565 -114193747 - ID_B1 SINE B4 -13 211 80 1 631 293 308 58 33 chr13 6091063 6091184 -114193128 + MER103 DNA DNA 1 124 -42 1 631 248 229 0 0 chr13 6092093 6092141 -114192171 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 631 220 321 0 0 chr13 6092147 6092200 -114192112 - ID4_ SINE ID -29 54 2 1 631 24 96 0 0 chr13 6092304 6092377 -114191935 + AT_rich Low_complexity Low_complexity 1 73 0 1 631 430 331 159 4 chr13 6092526 6092758 -114191554 + B4A SINE B4 2 269 -23 1 631 337 333 107 0 chr13 6092864 6093023 -114191289 - MT2A LTR ERVL -296 237 62 1 631 332 336 18 9 chr13 6093012 6093126 -114191186 - MTE2b LTR MaLR -264 115 1 1 631 935 299 60 8 chr13 6093570 6093836 -114190476 - B4 SINE B4 -2 290 11 1 631 573 15 0 0 chr13 6094194 6094260 -114190052 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 631 746 309 74 7 chr13 6094367 6094577 -114189735 + B4A SINE B4 2 223 -69 1 631 249 33 0 0 chr13 6094577 6094607 -114189705 + (CGGA)n Simple_repeat Simple_repeat 3 32 0 1 631 746 309 74 7 chr13 6094607 6094667 -114189645 + B4A SINE B4 224 290 -2 1 631 382 325 60 51 chr13 6094694 6094779 -114189533 - Charlie5 DNA MER1_type -70 2554 2469 1 631 5112 70 0 23 chr13 6094779 6095467 -114188845 + L1Md_F2 LINE L1 5911 6582 0 1 631 382 325 60 51 chr13 6095467 6095695 -114188617 - Charlie5 DNA MER1_type -156 2468 2238 1 631 301 253 104 37 chr13 6095833 6095997 -114188315 + L1MC5 LINE L1 7344 7518 -443 1 631 931 293 122 52 chr13 6096001 6096638 -114187674 + Lx9 LINE L1 6945 7626 -18 1 631 306 243 65 78 chr13 6096837 6097069 -114187243 + L1MC5 LINE L1 7650 7878 -83 1 631 671 288 182 58 chr13 6099629 6099936 -114184376 + MTE2b LTR MaLR 12 356 -23 1 631 573 294 98 35 chr13 6099986 6100240 -114184072 + ORR1E LTR MaLR 44 313 -46 1 631 351 0 0 0 chr13 6100283 6100322 -114183990 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 631 207 0 0 0 chr13 6100940 6100963 -114183349 + (T)n Simple_repeat Simple_repeat 1 23 0 1 631 322 318 108 35 chr13 6102193 6102485 -114181827 - MTEa LTR MaLR -7 372 58 1 631 184 250 59 0 chr13 6102997 6103065 -114181247 - MIRc SINE MIR -25 243 172 1 631 271 276 0 0 chr13 6103406 6103464 -114180848 + B3 SINE B2 134 191 -25 1 631 416 328 0 78 chr13 6103511 6103653 -114180659 + ID_B1 SINE B4 88 218 -6 1 631 253 151 53 70 chr13 6103606 6103663 -114180649 + PB1D10 SINE Alu 62 117 0 1 631 32 43 0 0 chr13 6103663 6103709 -114180603 + AT_rich Low_complexity Low_complexity 1 46 0 1 631 625 257 7 20 chr13 6103870 6104021 -114180291 - RSINE1 SINE B4 -13 152 4 1 631 193 370 35 42 chr13 6104994 6105138 -114179174 - L2 LINE L2 -448 2971 2829 1 631 646 242 118 63 chr13 6108566 6108896 -114175416 + MLT1B LTR MaLR 2 382 -8 1 631 1667 345 55 36 chr13 6109020 6109613 -114174699 + MTE-int LTR MaLR 751 1354 -226 1 631 3054 48 0 10 chr13 6109613 6109996 -114174316 - L1Md_F2 LINE L1 -12 6570 6192 1 631 1667 345 55 36 chr13 6109996 6110183 -114174129 + MTE-int LTR MaLR 1355 1546 -34 1 631 462 303 39 7 chr13 6110171 6110324 -114173988 + ORR1E LTR MaLR 8 165 -194 1 631 248 314 167 0 chr13 6110407 6110509 -114173803 + ORR1E LTR MaLR 256 374 -5 1 631 669 76 0 0 chr13 6110529 6110621 -114173691 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 631 239 190 0 33 chr13 6111727 6111787 -114172525 + CT-rich Low_complexity Low_complexity 1 58 0 1 631 369 314 56 16 chr13 6111789 6111915 -114172397 - B1F SINE Alu 0 149 19 1 631 311 296 45 27 chr13 6112658 6112807 -114171505 - MTEb LTR MaLR -3 376 166 1 631 263 325 16 71 chr13 6112844 6112970 -114171342 - MTEb LTR MaLR -244 126 8 1 631 2183 176 39 49 chr13 6113196 6113662 -114170650 - RMER6B LTR ERVK 0 461 1 1 631 2705 264 75 22 chr13 6114343 6115308 -114169004 - Lx8 LINE L1 -9 7464 6449 1 631 223 254 16 16 chr13 6115362 6115426 -114168886 + MIR SINE MIR 125 188 -74 1 631 683 360 16 60 chr13 6116043 6116407 -114167905 + ORR1E LTR MaLR 8 355 -4 1 631 1297 220 90 26 chr13 6118988 6119334 -114164978 + ORR1D2 LTR MaLR 1 368 -2 1 631 180 219 0 0 chr13 6121020 6121061 -114163251 + GA-rich Low_complexity Low_complexity 2 42 0 1 631 273 310 148 48 chr13 6121338 6121548 -114162764 + ORR1E LTR MaLR 82 312 -47 2 631 22 0 0 0 chr13 6121757 6121779 -114162533 + AT_rich Low_complexity Low_complexity 1 22 0 2 631 1820 191 30 108 chr13 6122004 6122535 -114161777 + RLTR31A_Mm LTR ERVK 1 584 0 2 631 433 0 35 0 chr13 6122711 6122768 -114161544 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 631 306 0 0 0 chr13 6122853 6122887 -114161425 + (T)n Simple_repeat Simple_repeat 1 34 0 2 631 838 314 0 9 chr13 6122887 6123112 -114161200 - B4A SINE B4 -68 224 2 2 631 501 17 0 0 chr13 6123385 6123443 -114160869 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 631 831 311 22 11 chr13 6123451 6123727 -114160585 - B4 SINE B4 -13 279 1 2 631 486 298 8 68 chr13 6123812 6123945 -114160367 + B3A SINE B2 5 129 -69 2 631 209 269 12 49 chr13 6125272 6125354 -114158958 + (TATATG)n Simple_repeat Simple_repeat 5 83 0 2 631 21 0 0 0 chr13 6126044 6126065 -114158247 + AT_rich Low_complexity Low_complexity 1 21 0 2 631 836 236 32 14 chr13 6127687 6127906 -114156406 + ID_B1 SINE B4 2 224 0 2 631 3385 61 0 0 chr13 6128517 6128959 -114155353 - L1Md_F2 LINE L1 -491 6091 5650 2 631 3488 82 0 11 chr13 6128959 6129427 -114154885 + L1_Mus1 LINE L1 6099 6561 -6 2 631 423 324 130 12 chr13 6132462 6132715 -114151597 - B4A SINE B4 -8 284 2 2 631 1047 109 0 0 chr13 6133371 6133527 -114150785 + (GA)n Simple_repeat Simple_repeat 2 157 0 2 631 1218 41 0 7 chr13 6133544 6133692 -114150620 + B1_Mus2 SINE Alu 1 147 0 2 631 321 355 21 49 chr13 6134028 6134170 -114150142 + L3 LINE CR1 3250 3387 -1102 2 631 260 400 0 0 chr13 6134651 6134826 -114149486 + (TG)n Simple_repeat Simple_repeat 1 175 0 2 631 792 303 109 22 chr13 6134839 6135106 -114149206 - B4 SINE B4 -1 291 2 2 631 288 0 0 0 chr13 6135648 6135680 -114148632 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 631 445 313 106 72 chr13 6135740 6136005 -114148307 - B4A SINE B4 -8 284 11 2 631 33 0 0 0 chr13 6137657 6137690 -114146622 + AT_rich Low_complexity Low_complexity 1 33 0 2 631 284 284 26 39 chr13 6137745 6137822 -114146490 - Charlie12 DNA MER1_type -2796 77 2 2 631 288 207 0 49 chr13 6137751 6137812 -114146500 + RMER30 DNA MER1_type 133 190 -12 2 631 453 246 73 48 chr13 6137859 6137983 -114146329 + Lx7 LINE L1 6612 6738 -958 2 631 1459 228 56 24 chr13 6138019 6138112 -114146200 - RLTR20A LTR ERVK 0 541 441 2 631 432 0 0 0 chr13 6138112 6138160 -114146152 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 631 1459 228 56 24 chr13 6138160 6138410 -114145902 - RLTR20A LTR ERVK -101 440 192 2 631 1327 46 11 0 chr13 6138410 6138585 -114145727 + (TTC)n Simple_repeat Simple_repeat 3 179 0 2 631 1459 190 22 17 chr13 6138585 6138727 -114145585 - RLTR20A LTR ERVK -350 191 1 2 631 1189 222 36 7 chr13 6138730 6139011 -114145301 + Lx7 LINE L1 6767 7055 -641 2 631 255 31 0 0 chr13 6139011 6139043 -114145269 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 631 256 96 19 37 chr13 6139063 6139117 -114145195 + T-rich Low_complexity Low_complexity 2 54 0 2 631 5402 216 127 97 chr13 6139358 6140228 -114144084 - Lx7 LINE L1 0 7696 6790 2 631 261 0 0 0 chr13 6140228 6140257 -114144055 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2 631 1188 63 0 0 chr13 6140259 6140402 -114143910 - B1_Mus1 SINE Alu -5 143 1 2 631 5402 216 127 97 chr13 6140402 6141012 -114143300 - Lx7 LINE L1 -907 6789 6196 2 631 2372 153 23 0 chr13 6141012 6141397 -114142915 + ORR1B1 LTR MaLR 1 394 0 2 631 5402 216 127 97 chr13 6141397 6141681 -114142631 - Lx7 LINE L1 -1501 6195 5887 2 631 747 57 0 0 chr13 6141681 6141786 -114142526 + (TCTA)n Simple_repeat Simple_repeat 4 108 0 2 631 5803 190 141 12 chr13 6141786 6142413 -114141899 - Lx7 LINE L1 -1810 5886 5194 2 631 183 42 0 0 chr13 6142413 6142437 -114141875 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 631 5803 189 141 11 chr13 6142437 6143076 -114141236 - Lx7 LINE L1 -687 5193 4428 2 631 270 0 0 0 chr13 6143076 6143106 -114141206 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2 631 5803 189 141 11 chr13 6143106 6143362 -114140950 - Lx7 LINE L1 -1453 4427 4165 2 631 1335 256 116 28 chr13 6143371 6143958 -114140354 - Lx7 LINE L1 -6813 915 342 2 631 2482 65 0 0 chr13 6144515 6144895 -114139417 - L1_Mus1 LINE L1 -666 5901 5522 2 631 3041 60 0 0 chr13 6144895 6145276 -114139036 + L1_Mus1 LINE L1 6187 6567 0 2 631 468 91 0 0 chr13 6145284 6145350 -114138962 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 631 654 13 0 0 chr13 6145350 6145425 -114138887 + (GGAA)n Simple_repeat Simple_repeat 4 78 0 2 631 418 319 0 41 chr13 6145854 6145975 -114138337 + PB1D10 SINE Alu 1 116 -1 2 631 28 0 0 0 chr13 6145975 6146003 -114138309 + AT_rich Low_complexity Low_complexity 1 28 0 2 631 240 273 0 52 chr13 6146010 6146068 -114138244 + ID SINE ID 6 60 -164 2 631 642 271 86 6 chr13 6146936 6147147 -114137165 - MTD LTR MaLR -1 418 190 2 631 1540 271 11 7 chr13 6147223 6147673 -114136639 + Lx9 LINE L1 6924 7375 -269 2 631 3935 44 0 2 chr13 6147773 6148254 -114136058 - L1Md_A LINE L1 -1 6581 6102 2 631 4061 23 0 0 chr13 6148254 6148932 -114135380 + L1Md_A LINE L1 5407 6084 -498 2 631 388 264 28 19 chr13 6148932 6149040 -114135272 - MTD LTR MaLR -278 141 33 2 631 1420 106 51 47 chr13 6149801 6149928 -114134384 - Lx LINE L1 -1 6653 6535 2 631 240 35 0 0 chr13 6149928 6149957 -114134355 + (CCCA)n Simple_repeat Simple_repeat 2 30 0 2 631 1420 106 51 47 chr13 6149957 6150086 -114134226 - Lx LINE L1 -120 6534 6397 2 631 216 0 0 0 chr13 6150659 6150683 -114133629 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 631 336 83 0 0 chr13 6150924 6150972 -114133340 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 631 350 325 45 19 chr13 6150983 6151137 -114133175 - B4A SINE B4 -31 261 104 2 631 293 313 133 42 chr13 6151544 6151664 -114132648 + RSINE1 SINE B4 2 132 -33 2 631 898 212 121 0 chr13 6151740 6151980 -114132332 + Lx9 LINE L1 7265 7533 -111 2 631 641 223 32 33 chr13 6151987 6152216 -114132096 - ORR1C2 LTR MaLR 0 384 1 2 631 263 242 22 11 chr13 6152216 6152308 -114132004 + Lx9 LINE L1 7537 7629 -15 2 631 240 286 83 0 chr13 6152514 6152598 -114131714 - MLT1E2 LTR MaLR -527 100 10 2 631 264 284 96 96 chr13 6153006 6153193 -114131119 + MLT1F2 LTR MaLR 202 388 -172 2 631 401 323 56 12 chr13 6153661 6153821 -114130491 + RMER15 LTR ERVL 319 485 -90 2 631 271 264 204 24 chr13 6154253 6154420 -114129892 + Lx8 LINE L1 7264 7460 -13 2 631 328 391 40 11 chr13 6154709 6154885 -114129427 - MIR3 SINE MIR -6 202 22 2 631 183 109 0 83 chr13 6154990 6155050 -114129262 + T-rich Low_complexity Low_complexity 2 56 0 2 631 21 36 0 0 chr13 6155052 6155080 -114129232 + AT_rich Low_complexity Low_complexity 1 28 0 2 631 342 0 0 0 chr13 6155990 6156028 -114128284 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 631 225 0 0 0 chr13 6156816 6156841 -114127471 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 631 652 284 9 5 chr13 6157304 6157516 -114126796 + Lx9 LINE L1 6716 6928 -716 2 631 323 274 18 62 chr13 6157977 6158090 -114126222 + B4A SINE B4 185 292 0 2 631 432 0 0 0 chr13 6158111 6158159 -114126153 + (TAGA)n Simple_repeat Simple_repeat 4 51 0 2 631 35 63 0 0 chr13 6158356 6158419 -114125893 + AT_rich Low_complexity Low_complexity 1 63 0 2 631 240 320 0 13 chr13 6160185 6160261 -114124051 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 631 273 57 0 0 chr13 6160347 6160382 -114123930 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 632 290 346 62 30 chr13 6160529 6160868 -114123444 - L1M5 LINE L1 -1288 4858 4509 2 632 651 298 87 10 chr13 6160884 6161091 -114123221 - MTEa LTR MaLR -58 321 99 2 632 233 265 69 90 chr13 6160982 6161127 -114123185 - MLT2B2 LTR ERVL -281 234 93 2 632 268 105 0 0 chr13 6162546 6162584 -114121728 + B1_Mus2 SINE Alu 96 133 -14 2 632 375 23 0 0 chr13 6162584 6162628 -114121684 + (TAA)n Simple_repeat Simple_repeat 2 45 0 2 632 22 35 0 0 chr13 6162862 6162891 -114121421 + AT_rich Low_complexity Low_complexity 1 29 0 2 632 593 319 44 38 chr13 6163038 6163145 -114121167 - Lx6 LINE L1 -27 7433 7325 2 632 1536 22 0 0 chr13 6163145 6163325 -114120987 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 632 593 319 44 38 chr13 6163325 6163556 -114120756 - Lx6 LINE L1 -136 7324 7093 2 632 617 271 112 3 chr13 6163564 6163905 -114120407 + L1MA4 LINE L1 5586 5964 -339 2 632 490 299 77 109 chr13 6164692 6164913 -114119399 + B3 SINE B2 1 214 -2 2 632 417 39 0 0 chr13 6166677 6166728 -114117584 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 632 497 316 15 15 chr13 6166763 6166898 -114117414 - ORR1E LTR MaLR -224 135 1 2 632 327 290 71 82 chr13 6167210 6167394 -114116918 + B3A SINE B2 4 185 -13 2 632 258 364 8 32 chr13 6167754 6167879 -114116433 + L4 LINE RTE 815 936 -1093 2 632 285 367 108 9 chr13 6168364 6168576 -114115736 + L4 LINE RTE 1332 1564 -465 2 632 1029 113 42 0 chr13 6168740 6168882 -114115430 + B1_Mus1 SINE Alu 1 148 0 2 632 270 116 0 0 chr13 6168882 6168925 -114115387 + (A)n Simple_repeat Simple_repeat 1 43 0 2 632 1245 62 0 0 chr13 6168957 6169117 -114115195 + B2_Mm2 SINE B2 2 161 -34 2 632 270 0 0 0 chr13 6169120 6169150 -114115162 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 2 632 253 263 0 0 chr13 6169311 6169368 -114114944 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 632 482 333 37 32 chr13 6169369 6169558 -114114754 - B4 SINE B4 -77 215 26 2 632 326 345 52 37 chr13 6169788 6170039 -114114273 - MER45C DNA Tip100 -685 268 15 2 632 371 214 14 170 chr13 6170501 6170638 -114113674 + MER57C2 LTR ERV1 3 117 -317 2 632 630 290 103 38 chr13 6170638 6170957 -114113355 - MT2A LTR ERVL 0 533 194 2 632 270 188 0 0 chr13 6171033 6171081 -114113231 - MT2A LTR ERVL -481 52 5 2 632 397 193 79 36 chr13 6171528 6171668 -114112644 + Lx4A LINE L1 6911 7056 -2 2 632 2982 29 0 11 chr13 6171678 6172041 -114112271 - L1Md_F2 LINE L1 -418 6164 5802 2 632 1645 70 0 30 chr13 6172041 6172278 -114112034 + L1Md_F2 LINE L1 6352 6581 -1 2 632 2982 29 0 11 chr13 6172278 6172292 -114112020 - L1Md_F2 LINE L1 -781 5801 5791 2 632 8181 65 0 0 chr13 6172735 6173856 -114110456 - L1_Mm LINE L1 -1532 4351 3231 2 632 2175 92 0 25 chr13 6173856 6174178 -114110134 + L1Md_F2 LINE L1 6269 6582 0 2 632 428 295 10 103 chr13 6174691 6174867 -114109445 + B4A SINE B4 108 266 -26 2 632 324 0 0 0 chr13 6174867 6174903 -114109409 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 632 428 295 10 103 chr13 6174903 6174930 -114109382 + B4A SINE B4 267 292 0 2 632 301 300 28 57 chr13 6175659 6175765 -114108547 + PB1D10 SINE Alu 3 105 -15 3 632 233 364 0 0 chr13 6175794 6175849 -114108463 + tRNA-Ala-GCY_ tRNA tRNA 8 62 -13 3 632 243 0 0 0 chr13 6175854 6175881 -114108431 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 3 632 626 250 0 14 chr13 6175896 6176034 -114108278 + B3 SINE B2 1 136 -80 3 632 306 73 0 0 chr13 6176062 6176103 -114108209 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 632 1131 124 0 0 chr13 6176111 6176288 -114108024 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 3 632 23 0 0 0 chr13 6176289 6176312 -114108000 + AT_rich Low_complexity Low_complexity 1 23 0 3 632 687 340 0 55 chr13 6176932 6177134 -114107178 + B3A SINE B2 8 198 0 3 632 1011 277 46 31 chr13 6178549 6178810 -114105502 + B4 SINE B4 5 269 -23 3 632 237 33 0 0 chr13 6178812 6178842 -114105470 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 632 395 197 28 0 chr13 6179797 6179868 -114104444 - ID4_ SINE ID -6 77 5 3 632 387 0 0 0 chr13 6180429 6180472 -114103840 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 3 632 452 329 20 7 chr13 6181224 6181374 -114102938 + RSINE1 SINE B4 1 152 -13 3 632 355 250 59 20 chr13 6181440 6181542 -114102770 + PB1D9 SINE Alu 2 107 -13 3 632 225 0 0 0 chr13 6181544 6181569 -114102743 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 3 632 355 282 122 0 chr13 6181569 6181700 -114102612 + MLT1B LTR MaLR 180 326 -64 3 632 513 322 0 0 chr13 6182652 6182767 -114101545 + RSINE1 SINE B4 14 128 -37 3 632 482 312 77 24 chr13 6182959 6183166 -114101146 - MTD LTR MaLR -201 218 1 3 632 234 0 0 0 chr13 6183344 6183370 -114100942 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 3 632 3282 15 24 45 chr13 6183449 6183869 -114100443 - IAPLTR2a LTR ERVK 0 411 1 3 632 477 62 0 0 chr13 6184328 6184393 -114099919 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 632 545 313 0 0 chr13 6184409 6184540 -114099772 - RSINE1 SINE B4 -32 133 3 3 632 235 359 92 0 chr13 6184561 6184703 -114099609 - MIR SINE MIR -34 228 74 3 632 240 231 139 51 chr13 6184852 6184989 -114099323 + MER96B DNA hAT 185 333 -84 3 632 583 229 8 8 chr13 6184990 6185109 -114099203 + B3A SINE B2 1 119 -79 3 632 339 85 0 0 chr13 6185119 6185166 -114099146 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 632 258 32 0 0 chr13 6185167 6185198 -114099114 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3 632 383 52 0 0 chr13 6185512 6185570 -114098742 + Lx LINE L1 6595 6652 -2 3 632 679 94 0 0 chr13 6185766 6185862 -114098450 + BC1_Mm scRNA scRNA 1 96 -56 3 632 317 330 18 9 chr13 6185861 6185974 -114098338 - B4A SINE B4 -169 123 10 3 632 446 287 43 0 chr13 6185987 6186102 -114098210 + PB1D7 SINE Alu 1 120 0 3 632 203 281 0 0 chr13 6186102 6186159 -114098153 + (TAAA)n Simple_repeat Simple_repeat 4 60 0 3 632 632 255 58 34 chr13 6186182 6186389 -114097923 + B3 SINE B2 1 212 -4 3 632 1765 79 0 4 chr13 6186476 6186731 -114097581 - L1_Mm LINE L1 -635 5248 4995 3 632 5528 60 0 4 chr13 6186732 6187433 -114096879 + L1Md_F2 LINE L1 5866 6563 -19 3 632 193 57 57 0 chr13 6187885 6187920 -114096392 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 632 21 36 0 0 chr13 6188002 6188030 -114096282 + AT_rich Low_complexity Low_complexity 1 28 0 3 632 297 283 9 83 chr13 6189212 6189320 -114094992 + PB1D9 SINE Alu 19 118 -2 3 632 202 328 0 15 chr13 6189321 6189386 -114094926 + GA-rich Low_complexity Low_complexity 1 64 0 3 632 22 0 0 0 chr13 6189988 6190010 -114094302 + AT_rich Low_complexity Low_complexity 1 22 0 3 632 417 309 72 26 chr13 6190174 6190185 -114094127 + ID_B1 SINE B4 63 151 -73 3 632 482 265 41 8 chr13 6190185 6190321 -114093991 + B1F SINE Alu 2 141 -8 3 632 272 299 38 30 chr13 6191577 6191708 -114092604 + GA-rich Low_complexity Low_complexity 3 134 0 3 632 508 289 35 35 chr13 6191759 6191931 -114092381 + B4 SINE B4 121 292 0 3 632 918 82 0 0 chr13 6193348 6193494 -114090818 + (TC)n Simple_repeat Simple_repeat 1 146 0 3 632 495 0 0 0 chr13 6193494 6193548 -114090764 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 632 371 127 0 0 chr13 6194067 6194122 -114090190 + (GAA)n Simple_repeat Simple_repeat 2 56 0 3 632 965 149 6 0 chr13 6194122 6194297 -114090015 + GA-rich Low_complexity Low_complexity 3 178 0 3 632 604 0 0 14 chr13 6194297 6194369 -114089943 + (GAA)n Simple_repeat Simple_repeat 2 72 0 3 632 21 71 0 0 chr13 6194511 6194553 -114089759 + AT_rich Low_complexity Low_complexity 1 42 0 3 632 572 292 0 25 chr13 6194657 6194815 -114089497 + RSINE1 SINE B4 12 165 0 3 632 28 0 0 0 chr13 6194826 6194854 -114089458 + AT_rich Low_complexity Low_complexity 1 28 0 3 632 455 285 29 51 chr13 6195094 6195231 -114089081 + ID_B1 SINE B4 85 218 -6 3 632 251 259 22 11 chr13 6195268 6195358 -114088954 + GA-rich Low_complexity Low_complexity 2 92 0 3 632 273 237 307 0 chr13 6196148 6196262 -114088050 - RMER15 LTR ERVL 0 575 427 3 632 190 336 87 16 chr13 6197147 6197274 -114087038 + MIRc SINE MIR 111 246 -22 3 632 413 245 152 118 chr13 6197372 6197690 -114086622 + MER31B LTR ERV1 119 445 -21 3 632 874 227 65 10 chr13 6197840 6198040 -114086272 + MTD LTR MaLR 203 413 -6 3 632 327 339 98 49 chr13 6198109 6198354 -114085958 + LTR40a LTR ERVL 198 454 -65 3 632 456 324 7 14 chr13 6199905 6200052 -114084260 + RSINE1 SINE B4 3 148 -17 3 632 441 0 0 0 chr13 6200056 6200105 -114084207 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 632 199 271 30 0 chr13 6200476 6200609 -114083703 + (TATG)n Simple_repeat Simple_repeat 3 139 0 3 632 359 73 18 0 chr13 6200610 6200665 -114083647 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 632 339 346 10 0 chr13 6201096 6201200 -114083112 + B4 SINE B4 182 286 -6 3 632 218 140 35 0 chr13 6201205 6201262 -114083050 + (CAGA)n Simple_repeat Simple_repeat 4 62 0 3 632 328 235 12 12 chr13 6201271 6201357 -114082955 + HAL1-3A_ME LINE L1 1976 2061 -797 3 632 525 270 40 101 chr13 6201891 6202089 -114082223 + B3 SINE B2 4 189 -27 3 632 304 331 118 23 chr13 6202624 6202887 -114081425 + B4 SINE B4 1 288 -4 3 632 378 0 0 0 chr13 6202913 6202955 -114081357 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 632 202 103 0 0 chr13 6202957 6202986 -114081326 - L3 LINE CR1 -1291 3198 3170 3 632 1160 75 7 0 chr13 6203799 6203946 -114080366 + B1_Mus1 SINE Alu 1 148 0 3 632 248 278 0 0 chr13 6204527 6204581 -114079731 + B1F1 SINE Alu 1 54 -95 3 632 226 347 27 0 chr13 6204581 6204601 -114079711 + B4A SINE B4 86 161 -131 3 632 447 309 87 30 chr13 6204635 6205106 -114079206 + L1MA8 LINE L1 4785 5282 -858 3 632 509 258 154 42 chr13 6205300 6205773 -114078539 + L1MA8 LINE L1 5543 6068 -223 3 632 276 282 47 12 chr13 6207213 6207299 -114077013 + MER34 LTR ERV1 450 538 -4 3 632 852 252 5 68 chr13 6208554 6208747 -114075565 + B3 SINE B2 6 187 -29 3 632 189 0 0 0 chr13 6208747 6208768 -114075544 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 632 852 252 5 68 chr13 6208768 6208795 -114075517 + B3 SINE B2 188 212 -4 3 632 222 304 93 25 chr13 6208977 6209095 -114075217 + MIRc SINE MIR 104 229 -39 3 632 372 104 0 0 chr13 6209227 6209294 -114075018 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 3 632 472 327 37 70 chr13 6209307 6209606 -114074706 - B4A SINE B4 0 292 4 3 632 468 0 0 0 chr13 6209606 6209658 -114074654 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 632 379 232 0 0 chr13 6209886 6209968 -114074344 + MIR3 SINE MIR 126 207 -1 3 632 387 0 0 0 chr13 6210176 6210219 -114074093 + (A)n Simple_repeat Simple_repeat 1 43 0 3 632 311 339 25 0 chr13 6211052 6211173 -114073139 + MLT1D LTR MaLR 23 146 -359 3 632 295 325 57 120 chr13 6211167 6211468 -114072844 - ORR1E LTR MaLR -10 349 68 3 632 589 324 122 43 chr13 6211579 6211924 -114072388 + MLT1D LTR MaLR 119 490 -15 3 632 242 296 78 0 chr13 6212797 6212879 -114071433 + ID4_ SINE ID 10 97 -55 3 632 605 255 81 27 chr13 6212889 6213038 -114071274 + B3A SINE B2 1 157 -41 3 632 636 87 0 0 chr13 6213040 6213132 -114071180 + (CA)n Simple_repeat Simple_repeat 1 92 0 3 632 24 32 0 0 chr13 6213135 6213166 -114071146 + AT_rich Low_complexity Low_complexity 1 31 0 3 632 432 37 0 0 chr13 6213235 6213289 -114071023 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 632 250 254 0 0 chr13 6213294 6213361 -114070951 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 632 467 320 62 3 chr13 6213362 6213666 -114070646 + L1MA5 LINE L1 5974 6295 -5 3 632 1007 299 56 71 chr13 6214633 6215476 -114068836 - L1MB8 LINE L1 -2 6176 5347 3 632 1929 228 57 40 chr13 6215630 6216120 -114068192 + RMER5 LTR ERV1 1 499 -35 3 632 342 0 0 0 chr13 6216120 6216158 -114068154 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 3 632 1929 228 57 40 chr13 6216158 6216192 -114068120 + RMER5 LTR ERV1 500 534 0 3 632 413 283 28 9 chr13 6216315 6216422 -114067890 - RSINE1 SINE B4 -46 119 11 3 632 369 145 0 0 chr13 6216677 6216739 -114067573 + (GA)n Simple_repeat Simple_repeat 1 62 0 3 632 1226 80 0 11 chr13 6216739 6216916 -114067396 + (GGGAA)n Simple_repeat Simple_repeat 2 176 0 3 632 871 322 62 114 chr13 6217127 6217495 -114066817 + MTEa LTR MaLR 18 366 -13 3 632 499 316 83 52 chr13 6218067 6218297 -114066015 + B4A SINE B4 1 237 -55 4 632 879 308 18 13 chr13 6218774 6219001 -114065311 + B4A SINE B4 2 229 -63 4 632 1134 171 133 13 chr13 6219001 6219226 -114065086 + ORR1B2 LTR MaLR 1 252 -115 4 632 2521 117 8 8 chr13 6219232 6219621 -114064691 + ORR1A2-int LTR MaLR 1567 1955 -8 4 632 2197 83 3 92 chr13 6219623 6219969 -114064343 + ORR1A2 LTR MaLR 1 315 -12 4 632 3118 63 5 2 chr13 6219969 6220364 -114063948 - MTA_Mm LTR MaLR 0 396 1 4 632 2197 83 3 92 chr13 6220364 6220376 -114063936 + ORR1A2 LTR MaLR 316 327 0 4 632 1655 215 9 9 chr13 6220379 6220708 -114063604 - ORR1C2-int LTR MaLR -1041 329 1 4 632 1788 143 112 11 chr13 6220708 6221055 -114063257 - ORR1C2 LTR MaLR 0 384 3 4 632 366 297 98 95 chr13 6221192 6221311 -114063001 + MER34A LTR ERV1 1 110 -461 4 632 429 20 0 0 chr13 6221311 6221361 -114062951 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 4 632 366 296 107 87 chr13 6221361 6221767 -114062545 + MER34A LTR ERV1 111 784 -3 4 632 1752 198 54 11 chr13 6222274 6222642 -114061670 - ORR1C2 LTR MaLR 0 384 1 4 632 571 301 79 82 chr13 6223226 6223505 -114060807 - MLT1B LTR MaLR 0 390 113 4 632 766 168 0 12 chr13 6223609 6223772 -114060540 + (TA)n Simple_repeat Simple_repeat 1 161 0 4 632 246 310 0 65 chr13 6223814 6223938 -114060374 - Lx9 LINE L1 -387 7257 7142 4 632 511 340 57 41 chr13 6224716 6224998 -114059314 + B4 SINE B4 8 271 -21 4 632 342 0 0 0 chr13 6225003 6225041 -114059271 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 632 492 277 131 122 chr13 6226233 6226562 -114057750 - MLT1A LTR MaLR -5 369 38 4 632 277 364 63 101 chr13 6226829 6227177 -114057135 + ORR1E LTR MaLR 19 353 -6 4 632 382 328 16 32 chr13 6227215 6227341 -114056971 + PB1 SINE Alu 2 125 -2 4 632 375 356 8 33 chr13 6227815 6227937 -114056375 + B3A SINE B2 45 163 -35 4 632 25 0 0 0 chr13 6227983 6228008 -114056304 + AT_rich Low_complexity Low_complexity 1 25 0 4 632 967 104 37 0 chr13 6228017 6228151 -114056161 + B1_Mus2 SINE Alu 1 139 -8 4 632 210 37 0 0 chr13 6228151 6228178 -114056134 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 632 249 0 73 0 chr13 6228240 6228281 -114056031 + (CAA)n Simple_repeat Simple_repeat 2 45 0 4 632 4007 129 65 8 chr13 6228924 6229565 -114054747 + Lx2B LINE L1 6320 6997 -3 4 632 229 227 24 118 chr13 6230177 6230262 -114054050 + MTEa LTR MaLR 1 77 -302 4 632 236 282 14 0 chr13 6230935 6231006 -114053306 + T-rich Low_complexity Low_complexity 3 74 0 4 632 1709 212 46 6 chr13 6231022 6231369 -114052943 - ORR1B2 LTR MaLR -6 361 1 4 632 774 50 0 0 chr13 6231373 6231472 -114052840 + (TTCC)n Simple_repeat Simple_repeat 2 100 0 4 632 309 304 108 31 chr13 6231572 6231701 -114052611 - B1F1 SINE Alu -10 139 1 4 632 24 32 0 0 chr13 6233710 6233741 -114050571 + AT_rich Low_complexity Low_complexity 1 31 0 4 632 378 315 82 82 chr13 6234660 6234892 -114049420 + B4 SINE B4 1 232 -60 4 632 189 0 0 0 chr13 6235072 6235093 -114049219 + (A)n Simple_repeat Simple_repeat 1 21 0 4 632 315 197 0 0 chr13 6235628 6235699 -114048613 + Lx7 LINE L1 7610 7680 -16 4 632 180 77 0 0 chr13 6236299 6236325 -114047987 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4 632 6249 48 3 4 chr13 6237273 6238042 -114046270 - L1Md_F2 LINE L1 -12 6570 5803 4 632 4251 48 0 0 chr13 6238042 6238580 -114045732 + L1Md_F2 LINE L1 5334 5871 -12 4 632 1140 115 17 6 chr13 6238775 6238950 -114045362 + B2_Mm1t SINE B2 3 179 -14 4 632 306 91 417 2 chr13 6238982 6239085 -114045227 + B2_Mm2 SINE B2 47 190 -5 4 632 847 279 95 33 chr13 6239803 6240077 -114044235 - MLT1B LTR MaLR 0 390 100 4 632 439 278 5 54 chr13 6241426 6241612 -114042700 + CT-rich Low_complexity Low_complexity 2 178 0 4 632 246 200 0 0 chr13 6241876 6241926 -114042386 - MLT2B5 LTR ERVL -667 50 1 4 632 393 39 0 0 chr13 6243258 6243309 -114041003 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 4 632 290 250 45 0 chr13 6243313 6243401 -114040911 - Lx3C LINE L1 -4 6972 6881 4 632 344 103 17 0 chr13 6244128 6244186 -114040126 + (TCCC)n Simple_repeat Simple_repeat 2 60 0 4 632 1333 269 48 31 chr13 6244272 6244687 -114039625 - Lx8 LINE L1 -333 7140 6719 4 632 261 0 0 0 chr13 6245487 6245516 -114038796 + (T)n Simple_repeat Simple_repeat 1 29 0 4 632 262 320 50 25 chr13 6245625 6245773 -114038539 - ORR1D1 LTR MaLR -207 163 8 4 632 522 46 0 0 chr13 6245786 6245851 -114038461 + (TAAA)n Simple_repeat Simple_repeat 2 66 0 4 632 388 315 67 7 chr13 6245875 6246025 -114038287 + RSINE1 SINE B4 5 163 -2 4 632 768 267 36 9 chr13 6247687 6247910 -114036402 + MER57E1 LTR ERV1 1 229 -143 4 632 380 277 104 26 chr13 6247952 6248067 -114036245 - B1F SINE Alu -7 142 19 4 632 251 204 0 0 chr13 6248343 6248387 -114035925 + L1_Rod LINE L1 5124 5167 -680 4 632 241 298 71 40 chr13 6248411 6248537 -114035775 + MER57E1 LTR ERV1 235 364 -8 4 632 1212 106 0 0 chr13 6248544 6248723 -114035589 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 4 632 485 252 32 56 chr13 6248723 6248740 -114035572 - RSINE1 SINE B4 0 165 150 4 632 1359 69 0 0 chr13 6248740 6249031 -114035281 + (TG)n Simple_repeat Simple_repeat 1 291 0 4 632 485 252 32 56 chr13 6249031 6249135 -114035177 - RSINE1 SINE B4 -16 149 46 4 632 399 113 0 0 chr13 6251269 6251340 -114032972 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 632 264 59 0 0 chr13 6251340 6251374 -114032938 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 632 261 336 7 88 chr13 6252458 6252595 -114031717 + MTEa LTR MaLR 6 131 -239 4 632 22 0 0 0 chr13 6252632 6252654 -114031658 + AT_rich Low_complexity Low_complexity 1 22 0 4 632 370 304 11 75 chr13 6253092 6253266 -114031046 + RSINE1 SINE B4 3 165 0 4 632 502 211 57 46 chr13 6253784 6253972 -114030340 + MTEa LTR MaLR 173 376 -3 4 632 895 262 40 73 chr13 6255365 6255665 -114028647 - B4A SINE B4 0 292 3 4 632 245 235 80 97 chr13 6255665 6255778 -114028534 - MTEb LTR MaLR -38 341 231 4 632 1172 247 33 127 chr13 6255777 6256171 -114028141 + MTE2a LTR MaLR 11 367 -12 4 632 756 184 0 0 chr13 6256834 6256981 -114027331 + GA-rich Low_complexity Low_complexity 3 149 0 4 632 738 312 57 13 chr13 6257009 6257236 -114027076 - B4 SINE B4 -55 237 1 4 632 363 352 65 50 chr13 6257522 6257929 -114026383 + MLT1E1A LTR MaLR 131 678 -2 4 632 242 310 56 0 chr13 6258226 6258297 -114026015 - ID4_ SINE ID -7 76 2 4 632 250 339 53 38 chr13 6258325 6258457 -114025855 - B1F2 SINE Alu -8 141 8 4 632 551 271 17 52 chr13 6258539 6258674 -114025638 - L1MA8 LINE L1 -173 6118 5991 4 632 1444 194 177 48 chr13 6258674 6259069 -114025243 + RLTR41 LTR ERV1 1 446 0 4 632 551 271 17 52 chr13 6259069 6259166 -114025146 - L1MA8 LINE L1 -301 5990 5894 4 632 331 299 6 35 chr13 6259182 6259355 -114024957 - L1MA8 LINE L1 -510 5787 5620 4 632 450 0 0 0 chr13 6259691 6259741 -114024571 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 632 977 269 91 60 chr13 6261524 6261876 -114022436 - MTE2b LTR MaLR -14 365 3 4 632 200 286 0 31 chr13 6261900 6261965 -114022347 + CT-rich Low_complexity Low_complexity 4 66 0 4 632 641 288 0 0 chr13 6262947 6263086 -114021226 + B1F1 SINE Alu 2 140 -9 4 632 336 24 0 0 chr13 6263268 6263309 -114021003 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 632 649 310 72 60 chr13 6263586 6263919 -114020393 + MLT1A0 LTR MaLR 4 340 -25 4 632 181 345 112 0 chr13 6264329 6264445 -114019867 - MIRc SINE MIR -117 151 23 4 632 360 0 0 0 chr13 6264957 6264997 -114019315 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 4 632 406 258 156 31 chr13 6265081 6265241 -114019071 - B4A SINE B4 -23 269 90 4 632 1698 169 77 17 chr13 6265247 6265593 -114018719 + MTB_Mm LTR MaLR 4 371 -36 4 632 211 104 41 20 chr13 6265618 6265667 -114018645 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 4 632 271 315 22 11 chr13 6265667 6265766 -114018546 - B4A SINE B4 -64 101 1 4 632 2504 83 101 8 chr13 6266047 6266423 -114017889 - IAPLTR2a LTR ERVK 0 411 1 4 632 6400 45 2 17 chr13 6266425 6267266 -114017046 - IAPEz-int LTR ERVK -2 6479 5651 4 632 2548 67 0 3 chr13 6267259 6267602 -114016710 - IAPEz-int LTR ERVK -4781 1700 1359 4 632 3252 58 22 16 chr13 6267602 6268168 -114016144 - IAPEz-int LTR ERVK -5819 662 168 4 632 226 321 0 0 chr13 6268168 6268221 -114016091 - RLTR27 LTR ERVK -34 275 223 4 632 1057 91 65 59 chr13 6268221 6268407 -114015905 - IAPEz-int LTR ERVK -6286 195 9 4 632 2387 87 116 8 chr13 6268408 6268779 -114015533 - IAPLTR2a LTR ERVK 0 411 1 4 632 422 267 91 14 chr13 6269501 6269721 -114014591 - L1ME1 LINE L1 -247 5932 5696 4 632 1160 297 113 69 chr13 6269753 6270303 -114014009 + Tigger7 DNA MER2_type 14 587 -118 4 632 2657 226 101 17 chr13 6270303 6271118 -114013194 - Lx7 LINE L1 -6 7690 6808 4 632 280 178 14 14 chr13 6271559 6271633 -114012679 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 4 632 226 220 71 71 chr13 6271690 6271817 -114012495 + Tigger7 DNA MER2_type 2234 2360 -131 4 632 7021 184 22 12 chr13 6271917 6273690 -114010622 - Lx5 LINE L1 -1 7049 5248 4 632 4252 153 7 34 chr13 6273686 6274028 -114010284 + L1_Mur2 LINE L1 4478 4802 -1075 4 632 1780 135 58 6 chr13 6274028 6274341 -114009971 - ORR1A4 LTR MaLR 0 329 1 4 632 4252 153 7 34 chr13 6274341 6274832 -114009480 + L1_Mur2 LINE L1 4803 5289 -588 4 632 229 337 40 59 chr13 6275295 6275396 -114008916 + Arthur1B DNA Tip100 3 101 -1124 4 632 432 0 0 0 chr13 6275574 6275622 -114008690 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 632 401 129 14 0 chr13 6275624 6275694 -114008618 + (GGGA)n Simple_repeat Simple_repeat 3 73 0 4 632 526 371 61 31 chr13 6275717 6276076 -114008236 + LTR16B2 LTR ERVL 41 410 -52 4 632 387 0 0 0 chr13 6276204 6276247 -114008065 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 632 607 325 103 4 chr13 6276269 6276522 -114007790 - B4A SINE B4 -13 279 2 4 632 21 36 0 0 chr13 6276524 6276552 -114007760 + AT_rich Low_complexity Low_complexity 1 28 0 4 632 183 190 0 0 chr13 6277648 6277706 -114006606 + (ATTG)n Simple_repeat Simple_repeat 2 59 0 4 632 289 261 58 8 chr13 6277895 6278015 -114006297 + MER34 LTR ERV1 417 542 0 4 632 425 298 159 68 chr13 6279231 6279570 -114004742 + MLT1L LTR MaLR 142 511 -99 4 632 263 71 24 0 chr13 6280122 6280164 -114004148 + (GGA)n Simple_repeat Simple_repeat 3 45 0 4 632 423 0 0 0 chr13 6281686 6281733 -114002579 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 632 319 294 76 5 chr13 6282818 6283016 -114001296 + L1MA8 LINE L1 6064 6275 -16 5 632 545 315 30 117 chr13 6283172 6283267 -114001045 + B4A SINE B4 29 103 -189 5 632 1518 97 14 0 chr13 6283267 6283483 -114000829 - L1_Mus1 LINE L1 0 6567 6349 5 632 545 315 30 117 chr13 6283483 6283653 -114000659 + B4A SINE B4 104 271 -21 5 632 239 289 10 30 chr13 6283655 6283755 -114000557 + (CATA)n Simple_repeat Simple_repeat 1 98 0 5 632 266 268 92 27 chr13 6283757 6283876 -114000436 + L1MC3 LINE L1 7575 7696 -89 5 632 242 39 77 0 chr13 6283876 6283928 -114000384 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 632 266 268 92 27 chr13 6283928 6283992 -114000320 + L1MC3 LINE L1 7697 7770 -15 5 632 694 287 16 50 chr13 6284008 6284327 -113999985 + L1MB8 LINE L1 5871 6178 0 5 632 876 242 11 26 chr13 6284777 6284968 -113999344 + ID_B1 SINE B4 20 207 -17 5 632 261 309 0 49 chr13 6284971 6285073 -113999239 + GA-rich Low_complexity Low_complexity 1 97 0 5 632 225 0 0 0 chr13 6285587 6285612 -113998700 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 632 180 0 0 0 chr13 6285721 6285741 -113998571 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 632 602 124 0 8 chr13 6286429 6286551 -113997761 + (TG)n Simple_repeat Simple_repeat 2 122 0 5 632 256 277 31 0 chr13 6286697 6286762 -113997550 - tRNA-Thr-ACG_ tRNA tRNA -4 73 7 5 632 1374 263 39 9 chr13 6288971 6289308 -113995004 + ORR1D2 LTR MaLR 12 358 -12 5 632 440 307 110 69 chr13 6289576 6289940 -113994372 - MTE2a LTR MaLR 0 379 1 5 632 200 222 16 0 chr13 6289945 6290008 -113994304 + A-rich Low_complexity Low_complexity 4 67 0 5 632 294 309 40 158 chr13 6290742 6291015 -113993297 - ORR1E LTR MaLR -2 357 117 5 9 670 270 14 18 chr13 6291440 6291621 -113992691 + B3A SINE B2 1 193 -23 5 633 209 226 38 0 chr13 6291977 6292030 -113992282 - L2 LINE L2 -1028 2391 2337 5 633 596 282 79 13 chr13 6293137 6293723 -113990589 - L1M2 LINE L1 -1388 5457 5163 5 633 4330 110 83 107 chr13 6293725 6294165 -113990147 + RMER17A2 LTR ERVK 1 444 -462 5 633 585 42 0 0 chr13 6294165 6294237 -113990075 + (TC)n Simple_repeat Simple_repeat 2 73 0 5 633 4330 110 83 107 chr13 6294237 6294724 -113989588 + RMER17A2 LTR ERVK 445 905 -1 5 633 731 309 14 14 chr13 6294743 6294790 -113989522 - B3 SINE B2 -5 211 166 5 633 306 0 0 0 chr13 6294790 6294824 -113989488 + (TATG)n Simple_repeat Simple_repeat 1 34 0 5 633 731 309 14 14 chr13 6294824 6294983 -113989329 - B3 SINE B2 -51 165 6 5 633 237 231 96 0 chr13 6295152 6295256 -113989056 - L1M2 LINE L1 -2908 3937 3824 5 633 206 241 0 0 chr13 6295285 6295339 -113988973 + T-rich Low_complexity Low_complexity 1 54 0 5 633 1082 87 50 0 chr13 6295350 6295511 -113988801 - L1_Mus3 LINE L1 -9 6629 6461 5 633 451 328 29 24 chr13 6295550 6296211 -113988101 - L1M2 LINE L1 -4247 2602 1933 5 633 224 387 0 0 chr13 6296934 6297009 -113987303 + ID4_ SINE ID 2 76 -7 5 633 418 301 105 5 chr13 6297155 6297364 -113986948 - MER74A LTR ERVL -101 521 226 5 633 468 289 93 43 chr13 6298568 6298926 -113985386 + L1MB3 LINE L1 5678 6063 -117 5 633 813 59 81 0 chr13 6298926 6299062 -113985250 - Lx3_Mus LINE L1 0 7009 6863 5 633 368 291 133 49 chr13 6299062 6299148 -113985164 + L1MB3 LINE L1 6064 6158 -22 5 633 21 0 0 0 chr13 6299483 6299504 -113984808 + AT_rich Low_complexity Low_complexity 1 21 0 5 633 1017 203 64 10 chr13 6299505 6299709 -113984603 - B3 SINE B2 -1 215 1 5 633 909 236 11 0 chr13 6300022 6300200 -113984112 + B3 SINE B2 31 210 -6 5 633 288 269 0 131 chr13 6300212 6300232 -113984080 + MT2B LTR ERVL 153 244 -356 5 633 423 256 0 0 chr13 6300232 6300318 -113983994 + B1_Mur4 SINE Alu 5 90 -60 5 633 260 283 42 32 chr13 6300234 6300329 -113983983 + ID_B1 SINE B4 87 182 -42 5 633 21 0 0 0 chr13 6300868 6300889 -113983423 + AT_rich Low_complexity Low_complexity 1 21 0 5 633 378 0 0 0 chr13 6301624 6301666 -113982646 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 633 213 39 0 0 chr13 6302064 6302090 -113982222 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 5 633 685 259 54 23 chr13 6302316 6302537 -113981775 - MTE2b LTR MaLR -151 228 1 5 633 240 35 0 0 chr13 6303430 6303459 -113980853 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 633 1150 294 85 11 chr13 6304513 6304758 -113979554 - Lx8 LINE L1 -144 7329 7077 5 633 414 0 0 0 chr13 6304758 6304804 -113979508 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 633 1150 294 85 11 chr13 6304804 6305029 -113979283 - Lx8 LINE L1 -397 7076 6826 5 633 325 327 182 29 chr13 6305376 6305620 -113978692 + B4A SINE B4 2 282 -10 5 633 3009 61 3 0 chr13 6307228 6307607 -113976705 - L1_Mus1 LINE L1 0 6567 6188 5 633 226 360 34 0 chr13 6307853 6307942 -113976370 + ID_B1 SINE B4 7 98 -126 5 633 613 206 60 42 chr13 6307991 6308158 -113976154 + RLTR17 LTR ERVK 1 170 -522 5 633 4106 54 0 0 chr13 6308158 6308697 -113975615 - L1Md_F2 LINE L1 -353 5530 4992 5 633 7896 48 6 1 chr13 6308697 6309678 -113974634 + L1Md_F2 LINE L1 5597 6582 0 5 633 2371 153 70 17 chr13 6309678 6310138 -113974174 + RLTR17 LTR ERVK 129 612 -80 5 633 474 136 0 0 chr13 6310201 6310289 -113974023 - Lx2 LINE L1 -23 6974 6887 5 633 1263 94 0 0 chr13 6310309 6310489 -113973823 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 633 3649 201 88 6 chr13 6310669 6311518 -113972794 + Lx5 LINE L1 5966 6884 -166 5 633 292 186 143 0 chr13 6311591 6311661 -113972651 - MTC LTR MaLR -287 134 55 5 633 432 123 0 0 chr13 6311661 6311734 -113972578 + (TTA)n Simple_repeat Simple_repeat 1 73 0 5 633 7961 149 30 4 chr13 6311734 6313129 -113971183 - Lx4A LINE L1 -9 7049 5619 5 633 545 313 123 0 chr13 6313130 6313373 -113970939 + MER90a LTR ERV1 264 536 -78 5 633 354 306 128 46 chr13 6313795 6314226 -113970086 - MER31B LTR ERV1 0 466 1 5 633 874 161 23 45 chr13 6315591 6315767 -113968545 - B2_Mm2 SINE B2 -22 173 2 5 633 221 222 0 53 chr13 6315934 6316010 -113968302 + A-rich Low_complexity Low_complexity 2 73 0 5 633 556 295 81 5 chr13 6316840 6317051 -113967261 - Lx8 LINE L1 -131 7342 7116 5 633 220 186 0 0 chr13 6317078 6317121 -113967191 - RSINE1 SINE B4 -120 45 3 5 633 251 281 102 0 chr13 6317550 6317678 -113966634 - L1MB3 LINE L1 -47 6136 5996 5 633 881 238 60 38 chr13 6317716 6318049 -113966263 - L1MB3 LINE L1 -464 5707 5365 5 633 195 39 0 0 chr13 6318151 6318159 -113966153 + (TA)n Simple_repeat Simple_repeat 2 9 0 5 633 330 26 0 0 chr13 6318159 6318198 -113966114 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 633 195 39 0 0 chr13 6318198 6318215 -113966097 + (TA)n Simple_repeat Simple_repeat 1 17 0 5 633 535 305 114 11 chr13 6318244 6318506 -113965806 - B4A SINE B4 -2 290 2 5 633 4039 98 12 0 chr13 6319278 6319848 -113964464 + L1_Mus3 LINE L1 6056 6632 -6 5 633 724 338 35 56 chr13 6320253 6320538 -113963774 - B4 SINE B4 -6 286 8 5 633 584 33 44 0 chr13 6321546 6321637 -113962675 + (CA)n Simple_repeat Simple_repeat 1 95 0 5 633 281 261 131 0 chr13 6321776 6321929 -113962383 + Charlie5 DNA MER1_type 2417 2589 -35 5 633 1905 49 8 0 chr13 6322514 6322758 -113961554 + L1Md_F2 LINE L1 6337 6582 0 5 633 360 0 0 0 chr13 6322863 6322903 -113961409 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 633 307 312 54 20 chr13 6323195 6323342 -113960970 - MER121 Unknown Unknown -216 196 45 5 633 349 293 0 0 chr13 6325034 6325116 -113959196 - ID2 SINE ID 0 83 2 5 633 700 324 52 0 chr13 6326408 6326621 -113957691 + ID_B1 SINE B4 1 224 0 5 633 668 177 7 0 chr13 6326623 6326764 -113957548 + GA-rich Low_complexity Low_complexity 3 144 0 5 633 945 44 29 7 chr13 6326764 6326902 -113957410 + (GGGAA)n Simple_repeat Simple_repeat 2 142 0 5 633 660 59 0 0 chr13 6326904 6326989 -113957323 + (GGAA)n Simple_repeat Simple_repeat 1 85 0 5 633 455 228 275 6 chr13 6327049 6327216 -113957096 + B3 SINE B2 3 214 -2 5 633 1273 90 17 6 chr13 6327238 6327416 -113956896 + B2_Mm2 SINE B2 2 181 -14 5 633 180 0 0 0 chr13 6327645 6327665 -113956647 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 633 280 177 15 46 chr13 6327682 6327747 -113956565 - MTC LTR MaLR -18 403 341 5 633 260 289 50 20 chr13 6328700 6328799 -113955513 + ORR1E LTR MaLR 246 347 -12 5 633 858 322 17 40 chr13 6329221 6329519 -113954793 - B4A SINE B4 0 292 2 5 633 501 281 65 15 chr13 6330685 6330884 -113953428 + Lx9 LINE L1 7245 7453 -191 5 633 911 109 0 7 chr13 6330888 6331036 -113953276 + (TG)n Simple_repeat Simple_repeat 1 147 0 5 633 240 270 0 26 chr13 6331221 6331297 -113953015 + GA-rich Low_complexity Low_complexity 3 76 0 5 633 387 401 30 0 chr13 6331305 6331472 -113952840 - MER63A DNA AcHobo -38 172 1 5 633 503 239 43 0 chr13 6331577 6331694 -113952618 + B4 SINE B4 10 131 -161 5 633 321 89 0 0 chr13 6331833 6331878 -113952434 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 633 592 327 147 23 chr13 6331895 6332283 -113952029 + L1MD1 LINE L1 4484 4919 -1227 5 633 227 250 0 0 chr13 6332316 6332368 -113951944 - L1M3 LINE L1 -472 5696 5645 5 633 346 202 59 12 chr13 6332445 6332530 -113951782 + B4 SINE B4 2 90 -202 5 633 479 151 11 0 chr13 6332758 6332851 -113951461 + (TG)n Simple_repeat Simple_repeat 1 94 0 5 633 266 162 29 29 chr13 6332858 6332928 -113951384 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 5 633 667 52 8 41 chr13 6332977 6333098 -113951214 + (TAGA)n Simple_repeat Simple_repeat 2 118 0 5 633 1535 139 88 18 chr13 6333211 6333395 -113950917 - RLTR25A LTR ERVK 0 1103 914 5 633 396 0 0 0 chr13 6333395 6333439 -113950873 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 633 1535 139 88 18 chr13 6333439 6333539 -113950773 - RLTR25A LTR ERVK -190 913 799 5 633 461 41 247 0 chr13 6333717 6333790 -113950522 + L1_Mur1 LINE L1 2223 2313 -3573 5 633 2272 46 25 0 chr13 6333830 6334115 -113950197 - L1Md_F2 LINE L1 0 6582 6291 5 633 1821 182 61 56 chr13 6334117 6334176 -113950136 - RLTR25A LTR ERVK -301 727 685 5 633 2808 43 0 39 chr13 6334176 6334536 -113949776 - ORR1A1 LTR MaLR 0 346 1 5 633 1821 182 61 56 chr13 6334536 6334884 -113949428 - RLTR25A LTR ERVK -344 684 318 5 633 8222 91 45 19 chr13 6334886 6336863 -113947449 - Lx3_Mus LINE L1 -5 7004 5015 6 633 2472 71 76 0 chr13 6336864 6337245 -113947067 + L1_Mur1 LINE L1 4072 4481 -1405 6 633 1985 166 28 0 chr13 6337245 6337570 -113946742 - RLTR25A LTR ERVK -767 336 3 5 633 556 354 107 32 chr13 6337794 6338419 -113945893 + L1MD1 LINE L1 5339 6010 -232 5 633 646 284 0 0 chr13 6338808 6338956 -113945356 + RSINE1 SINE B4 2 149 -16 6 633 182 37 37 0 chr13 6338965 6338992 -113945320 + (CATA)n Simple_repeat Simple_repeat 4 31 0 6 633 507 227 174 34 chr13 6339011 6339189 -113945123 + B3 SINE B2 1 203 -13 6 633 21 36 0 0 chr13 6339863 6339891 -113944421 + AT_rich Low_complexity Low_complexity 1 28 0 6 633 803 294 5 30 chr13 6339913 6340116 -113944196 + ID_B1 SINE B4 2 199 -25 6 633 376 361 16 0 chr13 6341025 6341147 -113943165 + B1F SINE Alu 2 125 -24 6 633 180 0 0 0 chr13 6341444 6341464 -113942848 + (CCA)n Simple_repeat Simple_repeat 2 21 0 6 633 234 292 122 11 chr13 6341764 6341854 -113942458 + LTR33 LTR ERVL 45 144 -371 6 633 597 283 9 57 chr13 6342624 6342825 -113941487 + B4A SINE B4 1 197 -95 6 633 547 256 43 0 chr13 6342726 6342843 -113941469 + B1_Mur2 SINE Alu 9 130 -19 6 633 371 292 37 12 chr13 6342886 6342984 -113941328 + B4A SINE B4 185 286 -6 6 633 258 253 124 103 chr13 6343061 6343158 -113941154 + B1F SINE Alu 51 149 0 6 633 22 0 0 0 chr13 6343162 6343184 -113941128 + AT_rich Low_complexity Low_complexity 1 22 0 6 633 18314 176 51 46 chr13 6343264 6348550 -113935762 + L1_Mur3 LINE L1 539 5842 -38 6 633 2442 251 68 34 chr13 6348563 6349193 -113935119 + Lx6 LINE L1 6676 7327 -133 6 633 362 54 36 0 chr13 6349193 6349249 -113935063 + (TTTG)n Simple_repeat Simple_repeat 4 61 0 6 633 2442 251 68 34 chr13 6349249 6349374 -113934938 + Lx6 LINE L1 7328 7456 -4 6 633 294 344 127 35 chr13 6351670 6351758 -113932554 - B4A SINE B4 -6 286 192 6 633 299 25 0 24 chr13 6351758 6351799 -113932513 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 633 438 320 24 67 chr13 6351805 6351969 -113932343 - B3A SINE B2 -38 160 4 6 633 299 348 7 98 chr13 6352009 6352162 -113932150 - B4A SINE B4 -94 198 60 6 633 508 340 154 8 chr13 6352569 6352925 -113931387 - MLT1C LTR MaLR -1 466 59 6 633 424 354 39 6 chr13 6353111 6353293 -113931019 + MER63A DNA AcHobo 2 189 -21 6 633 322 188 45 0 chr13 6353393 6353489 -113930823 - L1MC4a LINE L1 -741 7141 7044 6 633 339 267 21 64 chr13 6354022 6354210 -113930102 + GA-rich Low_complexity Low_complexity 1 180 0 6 633 680 261 9 52 chr13 6355285 6355495 -113928817 - RMER30 DNA MER1_type -1 201 1 6 633 1027 140 0 49 chr13 6355781 6355984 -113928328 - Lx LINE L1 0 6654 6462 6 633 5459 146 1 1 chr13 6355984 6356956 -113927356 + L1_Mur2 LINE L1 3537 4508 -1369 6 633 1016 291 103 27 chr13 6356960 6357405 -113926907 + RCHARR1 DNA MER1_type 3 481 -493 6 633 32950 79 4 4 chr13 6357526 6363516 -113920796 - L1Md_F2 LINE L1 -16 6566 575 6 633 1792 208 55 9 chr13 6363523 6363980 -113920332 + RCHARR1 DNA MER1_type 467 944 -30 6 633 207 185 15 30 chr13 6365242 6365309 -113919003 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 633 372 132 0 0 chr13 6365345 6365398 -113918914 - B3A SINE B2 -143 55 3 6 633 223 307 91 21 chr13 6365707 6365850 -113918462 - L2a LINE L2 0 3426 3274 6 633 625 316 39 18 chr13 6366015 6366295 -113918017 + Lx8 LINE L1 6625 6910 -563 6 633 309 324 42 21 chr13 6366311 6366453 -113917859 + Lx8 LINE L1 6977 7121 -352 6 633 488 281 63 28 chr13 6366689 6366832 -113917480 + B3A SINE B2 9 156 -42 6 633 336 24 0 0 chr13 6366837 6366878 -113917434 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 633 415 366 8 15 chr13 6367475 6367608 -113916704 - ID_B1 SINE B4 -7 217 86 6 633 5627 61 0 7 chr13 6367921 6368650 -113915662 - L1Md_F3 LINE L1 -2 6582 5859 6 633 795 274 136 45 chr13 6368735 6369044 -113915268 + MTD LTR MaLR 83 419 0 6 633 439 285 29 7 chr13 6370380 6370518 -113913794 + MLT1B LTR MaLR 4 144 -246 6 633 304 216 53 13 chr13 6370595 6370670 -113913642 + B4A SINE B4 1 78 -214 6 633 206 62 31 0 chr13 6370761 6370793 -113913519 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 6 633 491 256 173 0 chr13 6370808 6370941 -113913371 + MLT1B LTR MaLR 233 388 -2 6 633 218 105 26 0 chr13 6371247 6371285 -113913027 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 6 633 614 237 9 0 chr13 6371307 6371421 -113912891 - RSINE1 SINE B4 -32 133 19 6 633 545 297 48 21 chr13 6371458 6371644 -113912668 + RMER30 DNA MER1_type 6 196 -6 6 633 616 318 0 0 chr13 6371841 6371973 -113912339 + B1_Mur2 SINE Alu 6 137 -12 6 633 342 0 0 0 chr13 6371973 6372011 -113912301 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 6 633 283 377 75 0 chr13 6372133 6372239 -113912073 + ID_B1 SINE B4 82 195 -29 6 633 570 67 0 0 chr13 6372239 6372314 -113911998 + (GGAA)n Simple_repeat Simple_repeat 4 78 0 6 633 292 276 70 26 chr13 6372338 6372494 -113911818 + L1MEg LINE L1 782 944 -5140 6 633 220 123 17 50 chr13 6372615 6372675 -113911637 + (TA)n Simple_repeat Simple_repeat 2 59 0 6 633 342 318 186 6 chr13 6372821 6373125 -113911187 - MLT2B2 LTR ERVL -96 471 3 6 633 658 320 40 40 chr13 6373128 6373405 -113910907 + B4 SINE B4 3 279 -13 6 633 333 0 0 0 chr13 6373409 6373446 -113910866 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 633 1251 283 21 26 chr13 6374673 6375054 -113909258 + MTEa LTR MaLR 1 379 0 6 633 1951 135 75 162 chr13 6375702 6376234 -113908078 + RLTR44D LTR ERVK 1 486 0 6 633 342 282 40 47 chr13 6376937 6377086 -113907226 + MIR SINE MIR 81 228 -34 6 633 1141 271 56 64 chr13 6377192 6377551 -113906761 + ORR1E LTR MaLR 4 359 0 6 633 6120 199 58 2 chr13 6377706 6379125 -113905187 - Lx5 LINE L1 -1 7049 5526 6 633 3448 170 72 11 chr13 6379120 6379865 -113904447 - Lx5 LINE L1 -1033 4844 4054 6 633 230 146 0 40 chr13 6379845 6379895 -113904417 + Lx3C LINE L1 6093 6140 -836 6 633 3616 229 103 55 chr13 6379895 6380017 -113904295 - Lx5 LINE L1 -2866 3011 2890 6 633 252 0 0 0 chr13 6380017 6380045 -113904267 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 6 633 3616 234 90 52 chr13 6380045 6381966 -113902346 - Lx5 LINE L1 -2988 2889 896 6 633 435 164 0 52 chr13 6382361 6382438 -113901874 + PB1D9 SINE Alu 26 98 -22 6 633 287 220 66 174 chr13 6382438 6382482 -113901830 + MT2B LTR ERVL 190 297 -304 6 633 1086 137 44 0 chr13 6382456 6382638 -113901674 + URR1A DNA MER1_type 37 226 0 6 633 2388 50 3 0 chr13 6382654 6382951 -113901361 - L1Md_F2 LINE L1 -3 6579 6282 6 633 3629 94 0 2 chr13 6383489 6384020 -113900292 + L1_Mm LINE L1 4346 4875 -1008 6 633 888 218 62 10 chr13 6384070 6384265 -113900047 + B3 SINE B2 1 205 -11 6 633 264 287 18 114 chr13 6384685 6384799 -113899513 - PB1D7 SINE Alu 0 120 18 6 633 228 250 0 0 chr13 6384935 6384995 -113899317 + T-rich Low_complexity Low_complexity 1 60 0 6 633 261 0 0 0 chr13 6386407 6386436 -113897876 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 6 633 6219 112 62 13 chr13 6386644 6387964 -113896348 - Lx LINE L1 0 6654 5276 6 633 548 187 0 0 chr13 6387964 6388071 -113896241 + L1_Mur2 LINE L1 5148 5254 -623 6 633 5667 37 0 0 chr13 6389624 6390331 -113893981 - L1Md_F2 LINE L1 -237 5646 4940 6 633 7631 40 3 4 chr13 6390332 6391266 -113893046 + L1Md_F2 LINE L1 5646 6578 -4 6 633 1073 160 0 0 chr13 6391614 6391783 -113892529 + B2_Mm2 SINE B2 1 169 -26 6 633 186 265 0 0 chr13 6391935 6392003 -113892309 + (TATATG)n Simple_repeat Simple_repeat 5 72 0 6 633 625 325 65 28 chr13 6392047 6392294 -113892018 - B4A SINE B4 -35 257 2 6 633 1706 181 183 19 chr13 6393709 6394069 -113890243 - MTC LTR MaLR 0 421 3 6 633 591 332 126 61 chr13 6394353 6394616 -113889696 + B4A SINE B4 3 282 -10 6 633 207 100 0 0 chr13 6394663 6394693 -113889619 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 633 538 167 0 23 chr13 6395292 6395421 -113888891 + CT-rich Low_complexity Low_complexity 3 128 0 6 633 564 337 25 10 chr13 6395449 6395653 -113888659 + B4A SINE B4 4 210 -82 6 633 379 209 0 0 chr13 6395654 6395721 -113888591 + (TAA)n Simple_repeat Simple_repeat 3 69 0 6 633 673 252 42 46 chr13 6395727 6395943 -113888369 + B3 SINE B2 2 216 0 6 633 528 16 0 0 chr13 6396067 6396128 -113888184 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 633 769 298 35 31 chr13 6396884 6397172 -113887140 + B4A SINE B4 2 290 -2 6 633 312 27 0 0 chr13 6397183 6397220 -113887092 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 633 1305 83 0 0 chr13 6397794 6397974 -113886338 + (ATG)n Simple_repeat Simple_repeat 1 180 0 6 633 345 47 0 0 chr13 6398822 6398865 -113885447 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 633 236 413 60 14 chr13 6398886 6399102 -113885210 - MIR SINE MIR -10 252 27 6 633 243 400 45 0 chr13 6399690 6399800 -113884512 - LTR33B LTR ERVL -222 281 167 6 633 303 28 0 0 chr13 6400153 6400189 -113884123 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 633 234 240 6 223 chr13 6400628 6400794 -113883518 + RMER15 LTR ERVL 3 132 -443 6 633 483 285 46 0 chr13 6400921 6401051 -113883261 + RMER15 LTR ERVL 426 561 -14 6 633 466 99 0 24 chr13 6401244 6401327 -113882985 - Lx4A LINE L1 -323 6735 6655 6 633 849 29 0 0 chr13 6401402 6401505 -113882807 + MTB LTR MaLR 298 400 0 6 633 471 35 0 0 chr13 6401659 6401716 -113882596 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 633 771 295 15 5 chr13 6401763 6401964 -113882348 - B4 SINE B4 -88 204 2 6 633 3382 140 22 0 chr13 6402258 6402802 -113881510 + Lx4A LINE L1 6501 7056 -2 6 633 209 267 33 0 chr13 6403225 6403285 -113881027 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 6 633 420 55 0 0 chr13 6403773 6403828 -113880484 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 633 355 201 9 0 chr13 6403879 6403989 -113880323 + GSAT_MM Satellite Satellite 1 99 -372 6 633 431 250 40 30 chr13 6403994 6404093 -113880219 - B4 SINE B4 -67 225 126 7 633 324 256 73 81 chr13 6404250 6404400 -113879912 + MLT1A1 LTR MaLR 218 397 -11 7 633 362 322 38 44 chr13 6404678 6404837 -113879475 + RSINE1 SINE B4 5 162 -3 7 633 381 200 16 39 chr13 6404850 6405032 -113879280 + (CATA)n Simple_repeat Simple_repeat 1 178 0 7 633 312 195 31 25 chr13 6405068 6405231 -113879081 + (CA)n Simple_repeat Simple_repeat 1 164 0 7 633 823 292 24 5 chr13 6405420 6405633 -113878679 - ID_B1 SINE B4 -3 221 5 7 633 626 261 63 0 chr13 6407324 6407466 -113876846 + B3 SINE B2 1 151 -65 7 633 1089 106 0 0 chr13 6407472 6407652 -113876660 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 633 423 0 0 0 chr13 6407686 6407733 -113876579 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 633 189 0 0 0 chr13 6408930 6408951 -113875361 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 7 633 310 50 0 0 chr13 6408951 6408991 -113875321 - B1_Mur4 SINE Alu -11 139 100 7 633 368 200 11 0 chr13 6409096 6409191 -113875121 + CT-rich Low_complexity Low_complexity 2 97 0 7 633 369 0 0 0 chr13 6409252 6409293 -113875019 + (TATG)n Simple_repeat Simple_repeat 1 41 0 7 633 6791 52 2 5 chr13 6409801 6410654 -113873658 + L1Md_F2 LINE L1 5717 6567 -15 7 633 441 190 0 0 chr13 6410874 6410974 -113873338 + (TG)n Simple_repeat Simple_repeat 1 100 0 7 633 26 0 0 0 chr13 6411063 6411089 -113873223 + AT_rich Low_complexity Low_complexity 1 26 0 7 633 883 290 9 0 chr13 6413444 6413661 -113870651 - ID_B1 SINE B4 0 224 6 7 633 361 375 83 0 chr13 6413685 6413853 -113870459 + MLT1A1 LTR MaLR 226 407 -1 7 633 180 0 0 0 chr13 6413912 6413932 -113870380 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 633 1498 279 16 31 chr13 6414011 6414235 -113870077 - MT2A LTR ERVL -77 456 242 7 633 180 111 0 0 chr13 6414235 6414262 -113870050 + (CAG)n Simple_repeat Simple_repeat 3 29 0 7 633 1498 279 16 31 chr13 6414262 6414482 -113869830 - MT2A LTR ERVL -292 241 21 7 633 1020 260 44 8 chr13 6414470 6414718 -113869594 + MTE2b LTR MaLR 22 278 -101 7 633 220 284 0 13 chr13 6414906 6414991 -113869321 - L2a LINE L2 0 3426 3307 7 633 307 276 241 50 chr13 6415901 6416157 -113868155 + MTEb LTR MaLR 55 372 -7 7 633 324 211 0 0 chr13 6416950 6417026 -113867286 + CT-rich Low_complexity Low_complexity 2 77 0 7 633 207 0 0 0 chr13 6417029 6417052 -113867260 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 633 714 208 26 37 chr13 6417095 6417285 -113867027 - Lx7 LINE L1 -279 7417 7230 7 633 203 194 0 0 chr13 6418288 6418324 -113865988 + T-rich Low_complexity Low_complexity 1 36 0 7 633 1073 281 50 15 chr13 6418454 6418797 -113865515 + Lx8 LINE L1 6871 7225 -248 7 633 365 278 9 9 chr13 6418904 6419013 -113865299 + RMER15 LTR ERVL 436 544 -31 7 633 582 295 47 28 chr13 6419013 6419226 -113865086 - MLT1A0 LTR MaLR -127 238 22 7 633 403 275 90 16 chr13 6419662 6419784 -113864528 + PB1D10 SINE Alu 1 131 -18 7 633 1212 259 68 11 chr13 6419851 6420206 -113864106 - MTE2b LTR MaLR -4 375 1 7 633 25989 82 7 24 chr13 6420496 6420511 -113863801 + L1Md_F2 LINE L1 1686 1699 -4184 7 633 486 147 0 89 chr13 6420511 6420623 -113863689 - L1Md_F2 LINE L1 -4 6578 6477 7 633 25989 82 7 24 chr13 6420623 6421823 -113862489 + L1Md_F2 LINE L1 1700 2922 -2961 7 633 4265 21 2 0 chr13 6421823 6422304 -113862008 - LTRIS_Mm LTR ERV1 0 482 1 7 79 25989 82 7 24 chr13 6422304 6425056 -113859256 + L1Md_F2 LINE L1 2923 5586 -297 7 634 6893 88 22 6 chr13 6425056 6426034 -113858278 + L1Md_F2 LINE L1 5587 6580 -2 7 634 664 270 20 0 chr13 6426496 6426648 -113857664 + B3A SINE B2 2 156 -42 7 634 920 325 126 19 chr13 6426872 6427348 -113856964 - MER74A LTR ERVL -27 531 5 7 634 24 32 0 0 chr13 6427772 6427803 -113856509 + AT_rich Low_complexity Low_complexity 1 31 0 7 634 501 216 272 15 chr13 6427897 6428165 -113856147 - Lx9 LINE L1 0 7644 7308 7 634 636 284 128 67 chr13 6428180 6428441 -113855871 - L1MB3 LINE L1 -35 6148 5903 7 634 379 320 47 88 chr13 6428441 6428612 -113855700 - RSINE1 SINE B4 0 165 2 7 634 636 281 122 35 chr13 6428612 6428886 -113855426 - L1MB3 LINE L1 -281 5902 5572 7 634 211 286 12 0 chr13 6428963 6429047 -113855265 + (TA)n Simple_repeat Simple_repeat 1 85 0 7 634 348 246 0 0 chr13 6429470 6429539 -113854773 - PB1D10 SINE Alu -39 78 10 7 634 492 327 69 19 chr13 6429585 6429744 -113854568 + ID_B1 SINE B4 1 167 -57 7 634 320 260 91 30 chr13 6429674 6429773 -113854539 + PB1D7 SINE Alu 15 119 -1 7 634 511 368 20 15 chr13 6430090 6430286 -113854026 + MTEa LTR MaLR 2 198 -181 7 634 1467 264 59 37 chr13 6430284 6430775 -113853537 + RMER5 LTR ERV1 33 534 0 7 634 279 319 16 0 chr13 6430798 6430896 -113853416 + MTEa LTR MaLR 273 376 -3 7 634 772 306 171 0 chr13 6431933 6432178 -113852134 + B4 SINE B4 2 288 -4 7 634 318 183 0 0 chr13 6432181 6432252 -113852060 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 634 380 326 61 0 chr13 6432630 6432728 -113851584 + B4A SINE B4 3 106 -186 7 634 562 275 99 103 chr13 6432715 6432978 -113851334 - MTEa LTR MaLR -117 262 1 7 634 235 277 119 12 chr13 6433335 6433419 -113850893 - MER5A1 DNA MER1_type -23 143 51 7 634 228 35 0 0 chr13 6433660 6433689 -113850623 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 634 34013 50 0 3 chr13 6434980 6440676 -113843636 + L1Md_T LINE L1 1 5589 -297 7 634 8428 34 0 2 chr13 6440676 6441674 -113842638 + L1Md_T LINE L1 5590 6585 0 7 634 1088 264 135 32 chr13 6442598 6442938 -113841374 - MTEa LTR MaLR -3 376 2 7 634 510 266 19 29 chr13 6443288 6443493 -113840819 + L1MB3 LINE L1 5946 6148 -35 7 634 327 25 0 0 chr13 6443661 6443701 -113840611 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 634 204 125 0 0 chr13 6443961 6443993 -113840319 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 7 634 1173 290 85 17 chr13 6445487 6445841 -113838471 + MTEa LTR MaLR 2 379 0 7 634 192 200 0 0 chr13 6447915 6447960 -113836352 + GA-rich Low_complexity Low_complexity 2 46 0 7 634 426 140 10 20 chr13 6448120 6448222 -113836090 + (CATA)n Simple_repeat Simple_repeat 1 101 0 7 634 321 291 55 70 chr13 6448483 6448729 -113835583 + ORR1E LTR MaLR 130 366 -4 7 634 354 363 78 52 chr13 6449407 6449791 -113834521 + LTR86A1 LTR ERVL 120 513 0 7 634 226 314 14 14 chr13 6449868 6449891 -113834421 + B4 SINE B4 64 86 -206 7 634 309 308 84 0 chr13 6449891 6449998 -113834314 + PB1D10 SINE Alu 1 116 -1 7 634 539 303 35 7 chr13 6450129 6450272 -113834040 + RSINE1 SINE B4 9 155 -10 7 634 256 212 148 34 chr13 6450820 6450908 -113833404 - RMER15 LTR ERVL -154 421 324 7 634 1496 29 8 15 chr13 6451213 6452521 -113831791 + (TAGA)n Simple_repeat Simple_repeat 1 1299 0 7 634 351 358 15 7 chr13 6453116 6453251 -113831061 + B1F SINE Alu 5 140 -9 7 634 7927 48 7 2 chr13 6453271 6454449 -113829863 - L1Md_F2 LINE L1 0 6582 5397 7 634 501 320 66 44 chr13 6454465 6454648 -113829664 + B3A SINE B2 6 192 -6 7 634 3537 79 14 0 chr13 6454714 6455203 -113829109 + L1_Mus1 LINE L1 6120 6567 0 7 634 483 346 0 0 chr13 6455206 6455333 -113828979 + B3A SINE B2 50 176 -22 7 634 225 0 0 0 chr13 6455333 6455358 -113828954 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 634 965 297 114 51 chr13 6456375 6456769 -113827543 - MTD LTR MaLR 0 419 1 7 634 9191 44 20 2 chr13 6457407 6459174 -113825138 - L1Md_F3 LINE L1 -14 6570 4772 7 634 238 265 0 0 chr13 6459534 6459583 -113824729 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 634 828 249 119 18 chr13 6459614 6459941 -113824371 - L1MA4 LINE L1 -369 5931 5572 7 634 33 25 0 0 chr13 6460665 6460705 -113823607 + AT_rich Low_complexity Low_complexity 1 40 0 7 634 1066 271 39 18 chr13 6461251 6461536 -113822776 + B4 SINE B4 1 291 -1 7 634 209 226 32 0 chr13 6461887 6461949 -113822363 + CT-rich Low_complexity Low_complexity 31 94 0 7 634 265 204 45 57 chr13 6462228 6462405 -113821907 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 7 634 217 206 0 0 chr13 6462916 6462950 -113821362 - ID4_ SINE ID -49 34 1 7 634 220 69 0 0 chr13 6463599 6463628 -113820684 + (GA)n Simple_repeat Simple_repeat 1 29 0 7 634 938 108 22 28 chr13 6463629 6463810 -113820502 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 7 634 560 268 165 0 chr13 6463971 6464135 -113820177 - B4 SINE B4 -22 270 80 7 634 489 246 179 14 chr13 6464145 6464325 -113819987 - B3A SINE B2 0 216 15 7 634 239 156 0 22 chr13 6464328 6464374 -113819938 + ORR1D1 LTR MaLR 330 374 0 7 634 780 243 1 74 chr13 6466174 6466391 -113817921 + B3A SINE B2 4 202 -14 7 634 201 211 0 0 chr13 6466429 6466481 -113817831 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 634 1168 268 117 92 chr13 6466547 6466625 -113817687 - RMER15 LTR ERVL -15 560 485 7 634 3440 57 5 2 chr13 6466625 6467031 -113817281 - MTB_Mm LTR MaLR 0 407 1 7 634 1168 268 117 92 chr13 6467031 6467498 -113816814 - RMER15 LTR ERVL -91 484 1 7 634 2104 113 193 41 chr13 6467823 6468211 -113816101 + LTRIS5 LTR ERV1 1 447 0 7 634 251 270 20 20 chr13 6469220 6469322 -113814990 + (CA)n Simple_repeat Simple_repeat 2 103 0 7 634 203 289 154 16 chr13 6470475 6470598 -113813714 + MIR SINE MIR 8 147 -115 7 634 424 244 43 9 chr13 6471388 6471504 -113812808 - ID_B1 SINE B4 0 224 105 7 634 251 296 87 22 chr13 6471504 6471526 -113812786 - B1F1 SINE Alu 0 149 3 7 634 189 0 0 0 chr13 6471557 6471578 -113812734 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 634 719 221 188 27 chr13 6471978 6472164 -113812148 + B3 SINE B2 1 216 0 7 634 448 304 195 22 chr13 6472320 6472505 -113811807 - ID_B1 SINE B4 -6 218 2 8 634 450 0 0 0 chr13 6473461 6473511 -113810801 + (TC)n Simple_repeat Simple_repeat 1 50 0 8 634 193 29 29 29 chr13 6473847 6473882 -113810430 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 8 634 621 353 40 11 chr13 6473972 6474247 -113810065 - B4 SINE B4 -8 284 2 8 634 606 278 8 8 chr13 6474280 6474414 -113809898 - ID_B1 SINE B4 -5 219 86 8 634 279 241 83 100 chr13 6474930 6475050 -113809262 + MER96B DNA hAT 116 233 -184 8 634 332 289 77 82 chr13 6476027 6476197 -113808115 - MER53 DNA hAT -23 170 2 8 634 986 321 14 31 chr13 6476272 6476564 -113807748 - B4A SINE B4 0 292 6 8 634 499 232 20 20 chr13 6476786 6476887 -113807425 + PB1D10 SINE Alu 3 103 -14 8 634 385 310 17 8 chr13 6476890 6477007 -113807305 + MTEa LTR MaLR 36 153 -226 8 634 200 59 0 29 chr13 6477018 6477053 -113807259 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 8 634 473 263 34 8 chr13 6477053 6477172 -113807140 + MTEa LTR MaLR 160 281 -98 8 634 234 229 65 16 chr13 6477236 6477298 -113807014 + MTEb LTR MaLR 217 281 -98 8 634 246 246 65 16 chr13 6477299 6477361 -113806951 + MTEb LTR MaLR 217 281 -98 8 634 565 236 87 7 chr13 6477425 6477574 -113806738 + MTEb LTR MaLR 217 377 -2 8 634 886 279 232 0 chr13 6479116 6479500 -113804812 - Tigger1 DNA MER2_type -1606 812 340 8 634 1735 222 5 36 chr13 6479569 6479962 -113804350 - ORR1C2 LTR MaLR -3 381 1 8 634 428 180 61 204 chr13 6479977 6480152 -113804160 - Tigger1 DNA MER2_type -2161 257 102 8 634 3093 92 15 0 chr13 6480152 6480553 -113803759 - MTB_Mm LTR MaLR 0 407 1 8 634 428 180 61 204 chr13 6480553 6480607 -113803705 - Tigger1 DNA MER2_type -2317 101 61 8 634 443 318 75 43 chr13 6480627 6480788 -113803524 + B4A SINE B4 2 167 -125 8 634 570 29 0 0 chr13 6480788 6480856 -113803456 + (TA)n Simple_repeat Simple_repeat 2 69 0 8 634 306 0 0 0 chr13 6480901 6480935 -113803377 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 634 801 267 58 45 chr13 6481300 6481610 -113802702 + MER2 DNA MER2_type 29 342 -3 8 634 27 29 0 0 chr13 6482324 6482358 -113801954 + AT_rich Low_complexity Low_complexity 1 34 0 8 634 24 32 0 0 chr13 6482582 6482613 -113801699 + AT_rich Low_complexity Low_complexity 1 31 0 8 634 962 103 27 20 chr13 6482822 6482971 -113801341 + Lx3A LINE L1 6721 6870 -111 8 634 207 179 0 0 chr13 6483261 6483300 -113801012 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 8 634 603 287 44 49 chr13 6483301 6483484 -113800828 - B3A SINE B2 -16 182 1 8 634 259 284 38 45 chr13 6483732 6483865 -113800447 + L1MC5 LINE L1 7782 7913 -48 8 634 2614 216 66 2 chr13 6484526 6485059 -113799253 + Lx5 LINE L1 6481 7047 -3 8 634 375 23 0 0 chr13 6485089 6485133 -113799179 + (TA)n Simple_repeat Simple_repeat 2 45 0 8 634 2286 131 83 10 chr13 6485840 6486225 -113798087 - RLTR33 LTR ERVK -265 413 1 8 634 207 69 0 0 chr13 6486417 6486446 -113797866 + (CAG)n Simple_repeat Simple_repeat 1 29 0 8 634 762 260 90 91 chr13 6487109 6487445 -113796867 + ORR1E LTR MaLR 1 374 -5 8 634 226 205 0 0 chr13 6487870 6487909 -113796403 + MTE2b LTR MaLR 21 59 -320 8 634 1815 127 73 15 chr13 6487917 6488244 -113796068 - RLTR15 LTR ERVK -13 346 1 8 634 628 290 186 14 chr13 6488244 6488523 -113795789 + MTE2b LTR MaLR 53 379 0 8 634 17371 17 0 0 chr13 6488667 6490627 -113793685 + L1Md_T LINE L1 3627 5586 -297 8 634 8812 34 12 0 chr13 6490627 6491611 -113792701 + L1Md_T LINE L1 5587 6582 0 8 634 1434 235 22 20 chr13 6491611 6491657 -113792655 + L1M3 LINE L1 5616 5663 -520 8 634 1028 235 53 8 chr13 6493181 6493504 -113790808 - Lx2B LINE L1 0 7008 6643 8 634 259 128 21 0 chr13 6493527 6493574 -113790738 - L1M2 LINE L1 -542 5642 5595 8 634 507 17 0 0 chr13 6493614 6493674 -113790638 + (GA)n Simple_repeat Simple_repeat 1 60 0 8 634 305 188 164 0 chr13 6493770 6493858 -113790454 - L1M2 LINE L1 -570 5613 5506 8 634 2043 216 29 10 chr13 6494342 6494753 -113789559 - MT2A LTR ERVL -114 419 1 8 634 488 258 60 15 chr13 6494840 6494974 -113789338 + B1_Mur3 SINE Alu 7 146 -3 8 634 1305 48 0 0 chr13 6495023 6495169 -113789143 - B1_Mus2 SINE Alu 0 147 2 8 634 711 231 101 180 chr13 6495667 6495877 -113788435 + B4A SINE B4 1 219 -73 8 634 646 304 43 10 chr13 6495877 6496086 -113788226 + B3 SINE B2 1 216 0 8 634 711 231 101 180 chr13 6496086 6496192 -113788120 + B4A SINE B4 220 292 0 8 634 584 324 76 0 chr13 6497078 6497263 -113787049 + B4 SINE B4 2 200 -92 8 634 1067 117 58 0 chr13 6497278 6497432 -113786880 - B2_Mm2 SINE B2 -32 163 1 8 634 249 222 0 36 chr13 6497432 6497488 -113786824 + B4 SINE B4 186 239 -53 8 634 780 11 0 0 chr13 6497516 6497605 -113786707 + (TC)n Simple_repeat Simple_repeat 1 89 0 8 634 940 221 166 106 chr13 6498886 6499235 -113785077 + MTEa LTR MaLR 1 370 -9 8 634 495 112 0 0 chr13 6499435 6499515 -113784797 + (TGGA)n Simple_repeat Simple_repeat 3 82 0 8 634 1258 12 11 23 chr13 6499522 6499697 -113784615 + (TAGA)n Simple_repeat Simple_repeat 1 173 0 8 634 625 204 21 55 chr13 6500034 6500179 -113784133 + B1_Mus1 SINE Alu 3 142 -6 1 634 5622 213 27 80 chr13 6500268 6501665 -113782647 + Lx7 LINE L1 6370 7692 -4 2 634 657 38 0 0 chr13 6501665 6501745 -113782567 + (GA)n Simple_repeat Simple_repeat 2 81 0 3 634 307 133 162 34 chr13 6501909 6502026 -113782286 - Lx9 LINE L1 -7 7637 7506 4 634 475 270 29 0 chr13 6502010 6502147 -113782165 - L1MB3 LINE L1 -86 6097 5957 5 634 669 290 85 17 chr13 6502655 6502950 -113781362 - L1MA4 LINE L1 -370 5930 5616 6 634 429 234 26 112 chr13 6503039 6503203 -113781109 - MTD LTR MaLR -21 398 219 7 634 231 195 0 0 chr13 6503239 6503280 -113781032 - MTD LTR MaLR -155 264 224 7 634 653 82 10 0 chr13 6503301 6503398 -113780914 + (TA)n Simple_repeat Simple_repeat 2 99 0 8 634 1735 50 14 0 chr13 6503444 6503663 -113780649 - L1Md_F2 LINE L1 0 6582 6361 9 634 1849 37 0 0 chr13 6503663 6503877 -113780435 + L1Md_F2 LINE L1 5952 6165 -417 1 634 386 361 33 22 chr13 6506202 6506474 -113777838 + MLT2D LTR ERVL 7 281 -133 1 634 768 169 0 0 chr13 6506595 6506773 -113777539 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 1 634 591 168 19 6 chr13 6506804 6506966 -113777346 + (TGGA)n Simple_repeat Simple_repeat 4 167 0 1 634 375 23 0 0 chr13 6508395 6508439 -113775873 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 634 219 289 19 44 chr13 6508485 6508644 -113775668 + (TATG)n Simple_repeat Simple_repeat 4 158 0 1 634 270 374 0 0 chr13 6508661 6508832 -113775480 + (TG)n Simple_repeat Simple_repeat 2 172 0 1 634 554 344 38 61 chr13 6509719 6509982 -113774330 + B4A SINE B4 5 261 -31 1 634 23817 31 16 0 chr13 6509982 6512827 -113771485 + L1Md_F2 LINE L1 2697 5586 -297 1 634 8340 45 1 1 chr13 6512827 6513823 -113770489 + L1Md_F2 LINE L1 5587 6582 0 1 634 498 33 0 0 chr13 6513922 6513982 -113770330 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 634 509 260 69 42 chr13 6513982 6514199 -113770113 + ORR1E LTR MaLR 26 248 -111 1 634 239 326 136 54 chr13 6514995 6515274 -113769038 - LTR40b LTR ERVL -12 450 149 2 634 2040 165 39 16 chr13 6515771 6516153 -113768159 - MTB_Mm LTR MaLR -16 391 1 2 634 276 163 233 14 chr13 6516242 6516324 -113767988 - MTC LTR MaLR -321 98 1 2 634 306 301 75 28 chr13 6516687 6516793 -113767519 + B1F1 SINE Alu 1 111 -38 2 634 302 300 54 9 chr13 6517467 6517578 -113766734 + B1F SINE Alu 29 144 -5 2 634 1626 232 53 26 chr13 6517727 6518218 -113766094 - RLTR11A2 LTR ERVK -17 510 7 2 634 510 234 78 0 chr13 6519152 6519280 -113765032 + RMER15 LTR ERVL 423 560 -15 2 634 231 218 18 0 chr13 6520407 6520462 -113763850 - B1F SINE Alu -8 141 86 2 634 441 36 0 0 chr13 6520935 6520990 -113763322 + (TCTG)n Simple_repeat Simple_repeat 1 55 0 2 634 280 294 6 3 chr13 6521010 6521100 -113763212 + ORR1D2 LTR MaLR 3 93 -281 2 634 38944 40 0 3 chr13 6521418 6527729 -113756583 - L1Md_T LINE L1 -1 6584 195 3 634 732 227 195 42 chr13 6528828 6529130 -113755182 + ORR1D2 LTR MaLR 22 370 0 2 634 226 299 36 27 chr13 6530337 6530447 -113753865 - MIR SINE MIR -43 219 109 3 634 1508 246 53 23 chr13 6530757 6531101 -113753211 + Lx8 LINE L1 6603 6955 -518 3 634 261 0 0 0 chr13 6531101 6531130 -113753182 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 634 369 0 0 0 chr13 6531130 6531170 -113753142 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 634 1508 246 53 23 chr13 6531170 6531223 -113753089 + Lx8 LINE L1 6956 7012 -461 3 634 1413 229 87 17 chr13 6531284 6531630 -113752682 - ORR1D2 LTR MaLR 0 370 1 3 634 696 317 61 35 chr13 6532492 6532803 -113751509 + Lx8 LINE L1 6909 7227 -246 3 634 4757 153 109 26 chr13 6532832 6533851 -113750461 + RLTR25A LTR ERVK 1 1103 0 3 634 791 253 27 9 chr13 6533936 6534155 -113750157 + ID_B1 SINE B4 2 224 0 3 634 320 301 89 8 chr13 6534280 6534404 -113749908 + RSINE1 SINE B4 2 135 -30 3 634 420 285 38 8 chr13 6535139 6535270 -113749042 + ID_B1 SINE B4 78 212 -12 4 634 1839 145 0 59 chr13 6535618 6535984 -113748328 - ORR1B1 LTR MaLR -1 393 1 4 634 3450 28 5 0 chr13 6536098 6536492 -113747820 + MTA_Mm LTR MaLR 1 396 0 4 634 296 202 19 38 chr13 6536539 6536639 -113747673 + B1F SINE Alu 18 134 -15 4 634 24 0 0 0 chr13 6536650 6536674 -113747638 + AT_rich Low_complexity Low_complexity 1 24 0 4 634 1335 234 69 30 chr13 6537012 6537374 -113746938 - MTEa LTR MaLR 0 379 4 4 634 284 98 0 0 chr13 6537971 6538012 -113746300 - B2_Mm2 SINE B2 -154 41 1 4 634 1206 236 60 40 chr13 6538827 6539191 -113745121 - MTE2b LTR MaLR -4 417 3 4 634 670 220 201 11 chr13 6539287 6539466 -113744846 + B3 SINE B2 4 216 0 4 634 546 328 51 28 chr13 6539718 6539972 -113744340 + MLT1A1 LTR MaLR 97 356 -52 4 634 612 303 98 21 chr13 6539997 6540203 -113744109 + MER77 LTR ERVL 245 464 -143 5 634 468 51 0 0 chr13 6540203 6540262 -113744050 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 634 612 303 98 21 chr13 6540262 6540382 -113743930 + MER77 LTR ERVL 465 596 -11 5 634 423 0 0 0 chr13 6540702 6540749 -113743563 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 634 1267 84 11 22 chr13 6541318 6541500 -113742812 + B2_Mm1t SINE B2 1 180 -13 5 634 595 25 12 0 chr13 6541584 6541665 -113742647 + L1Md_A LINE L1 6500 6581 -1 5 634 441 54 0 0 chr13 6542602 6542658 -113741654 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 634 603 288 0 0 chr13 6543210 6543363 -113740949 + B4A SINE B4 126 278 -14 5 634 228 111 0 0 chr13 6543366 6543402 -113740910 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 634 499 266 8 16 chr13 6543638 6543764 -113740548 - ID_B1 SINE B4 -8 216 92 5 634 1855 122 119 0 chr13 6544047 6544341 -113739971 + ORR1A4 LTR MaLR 1 329 0 5 634 23 0 0 0 chr13 6544646 6544669 -113739643 + AT_rich Low_complexity Low_complexity 1 23 0 6 634 294 281 150 42 chr13 6545011 6545178 -113739134 - MLT1C LTR MaLR -92 375 191 6 634 1056 91 0 0 chr13 6545192 6545346 -113738966 + (GA)n Simple_repeat Simple_repeat 1 154 0 6 634 414 69 0 0 chr13 6549520 6549578 -113734734 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 634 213 39 0 0 chr13 6550248 6550274 -113734038 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 634 843 206 0 0 chr13 6550344 6550524 -113733788 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 634 699 230 45 50 chr13 6550553 6550773 -113733539 - ID_B1 SINE B4 -3 221 3 6 634 891 266 14 14 chr13 6550773 6550990 -113733322 - B4A SINE B4 -75 217 1 6 634 442 159 148 0 chr13 6551300 6551388 -113732924 + B1_Mur3 SINE Alu 48 148 -1 6 634 194 303 64 26 chr13 6551435 6551513 -113732799 + MIR3 SINE MIR 115 195 -13 6 634 302 348 1 52 chr13 6551639 6551787 -113732525 + B4 SINE B4 67 203 -89 7 634 456 226 24 8 chr13 6552075 6552200 -113732112 + B1F SINE Alu 2 128 -21 7 634 3541 50 0 18 chr13 6552585 6553038 -113731274 + L1_Mus2 LINE L1 6122 6566 0 7 634 1038 98 98 6 chr13 6553073 6553247 -113731065 + B2_Mm2 SINE B2 6 195 0 7 634 531 45 0 0 chr13 6553261 6553327 -113730985 + (GAAAA)n Simple_repeat Simple_repeat 4 69 0 7 79 889 283 56 62 chr13 6553424 6553748 -113730564 - Lx5 LINE L1 -10 7040 6719 7 635 934 301 22 0 chr13 6553838 6554114 -113730198 + B4A SINE B4 1 282 -10 7 635 302 254 104 65 chr13 6554986 6555237 -113729075 - ID_B1 SINE B4 -11 281 2 7 635 701 218 13 13 chr13 6556393 6556542 -113727770 - B1_Mur1 SINE Alu 0 149 1 7 635 21 0 0 0 chr13 6557702 6557723 -113726589 + AT_rich Low_complexity Low_complexity 1 21 0 7 635 633 208 0 0 chr13 6557723 6557896 -113726416 + (CA)n Simple_repeat Simple_repeat 2 174 0 8 635 838 226 40 35 chr13 6557899 6558101 -113726211 - ID_B1 SINE B4 -15 209 7 8 635 306 0 0 0 chr13 6558247 6558281 -113726031 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 635 413 189 11 0 chr13 6558349 6558444 -113725868 + Lx6 LINE L1 7339 7434 -26 8 635 309 26 0 0 chr13 6558456 6558494 -113725818 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 635 265 229 16 32 chr13 6558857 6558920 -113725392 - PB1D10 SINE Alu -33 84 23 8 635 254 305 0 68 chr13 6558862 6558950 -113725362 - ID_B1 SINE B4 -65 159 78 8 635 225 0 0 0 chr13 6559393 6559418 -113724894 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 635 327 25 0 0 chr13 6559686 6559726 -113724586 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 635 246 316 61 0 chr13 6560028 6560126 -113724186 - PB1D10 SINE Alu -9 108 5 8 635 316 252 325 6 chr13 6560284 6560437 -113723875 - B3A SINE B2 -13 203 2 9 635 816 287 70 46 chr13 6560554 6560839 -113723473 - B4 SINE B4 0 292 1 9 635 385 311 11 0 chr13 6561795 6561885 -113722427 - PB1D10 SINE Alu -18 99 9 9 635 342 343 9 37 chr13 6561813 6561922 -113722390 - ID_B1 SINE B4 -63 161 56 9 635 555 265 15 7 chr13 6562085 6562222 -113722090 + ID_B1 SINE B4 86 223 -1 9 635 219 261 32 54 chr13 6562816 6562909 -113721403 - B3A SINE B2 -105 93 3 9 635 210 250 95 86 chr13 6562909 6563011 -113721301 - PB1 SINE Alu -22 105 3 9 635 893 241 52 73 chr13 6563300 6563586 -113720726 - MTE2a LTR MaLR -66 313 34 9 635 470 295 129 87 chr13 6564509 6564531 -113719781 - B4 SINE B4 -2 290 269 9 635 242 95 24 0 chr13 6564531 6564573 -113719739 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 635 470 295 129 87 chr13 6564573 6564791 -113719521 - B4 SINE B4 -24 268 40 9 635 189 74 0 0 chr13 6565188 6565215 -113719097 + (ATTTG)n Simple_repeat Simple_repeat 5 31 0 1 635 445 315 64 39 chr13 6565489 6565770 -113718542 - B4A SINE B4 -4 288 1 1 635 308 260 404 19 chr13 6566380 6566541 -113717771 + ID_B1 SINE B4 1 223 -1 1 635 348 43 0 0 chr13 6566782 6566828 -113717484 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 635 785 240 44 6 chr13 6568715 6568895 -113715417 + B4 SINE B4 83 269 -23 1 635 435 68 0 0 chr13 6568895 6568954 -113715358 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 635 355 279 325 5 chr13 6569336 6569527 -113714785 - ORR1E LTR MaLR -1 369 118 1 635 427 325 8 23 chr13 6569632 6569761 -113714551 - ORR1E LTR MaLR -228 131 5 1 635 805 164 0 8 chr13 6570209 6570359 -113713953 + B2_Mm2 SINE B2 2 146 -70 1 635 2086 170 55 10 chr13 6570390 6570793 -113713519 - MTC LTR MaLR 0 421 1 1 635 22 35 0 0 chr13 6571654 6571683 -113712629 + AT_rich Low_complexity Low_complexity 1 29 0 1 635 619 230 56 13 chr13 6571705 6571870 -113712442 + B3A SINE B2 29 202 -14 1 635 212 162 0 0 chr13 6572059 6572096 -113712216 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 635 1221 28 0 0 chr13 6573107 6573252 -113711060 + (TCTCCC)n Simple_repeat Simple_repeat 4 148 0 1 635 303 28 0 0 chr13 6573252 6573287 -113711025 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 635 260 218 18 0 chr13 6573288 6573343 -113710969 - RSINE1 SINE B4 -41 124 69 1 635 807 321 42 0 chr13 6574468 6574683 -113709629 + B4A SINE B4 3 226 -66 1 635 207 0 0 0 chr13 6575192 6575215 -113709097 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 635 769 169 35 89 chr13 6575440 6575642 -113708670 - B2_Mm2 SINE B2 -4 191 1 1 635 180 0 0 0 chr13 6575880 6575900 -113708412 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 635 939 274 29 16 chr13 6575901 6576146 -113708166 - MTEa LTR MaLR -13 366 119 1 635 706 308 58 13 chr13 6578014 6578221 -113706091 + B4 SINE B4 14 230 -62 1 635 520 271 24 8 chr13 6578221 6578344 -113705968 + B3A SINE B2 1 125 -73 1 635 25 0 0 0 chr13 6579385 6579410 -113704902 + AT_rich Low_complexity Low_complexity 1 25 0 1 635 913 209 16 31 chr13 6579420 6579613 -113704699 + B3 SINE B2 27 216 0 1 635 194 0 39 0 chr13 6579642 6579668 -113704644 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 635 262 302 80 23 chr13 6581004 6581092 -113703220 - B1F SINE Alu -54 95 3 1 635 264 200 0 0 chr13 6581099 6581164 -113703148 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 635 257 274 103 9 chr13 6581255 6581362 -113702950 - PB1D10 SINE Alu 0 117 1 1 635 231 61 0 0 chr13 6581436 6581469 -113702843 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 635 318 336 69 69 chr13 6582615 6582861 -113701451 + L1M5 LINE L1 3343 3588 -2558 1 635 240 315 55 9 chr13 6583266 6583375 -113700937 + L1ME3B LINE L1 5946 6059 -181 1 635 306 0 0 0 chr13 6584160 6584194 -113700118 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 635 654 288 66 8 chr13 6584212 6584471 -113699841 - B4A SINE B4 -17 275 2 1 635 243 0 0 0 chr13 6584748 6584775 -113699537 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 635 874 257 113 53 chr13 6585204 6585541 -113698771 + ORR1E LTR MaLR 1 357 -2 1 635 1036 254 56 90 chr13 6586673 6587063 -113697249 + MTE2a LTR MaLR 1 377 -2 1 635 342 115 0 0 chr13 6587290 6587342 -113696970 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 635 441 240 176 46 chr13 6587350 6587503 -113696809 + B3A SINE B2 26 198 0 1 635 183 354 94 34 chr13 6589261 6589410 -113694902 + L2b LINE L2 3126 3283 -92 1 635 984 173 6 0 chr13 6591334 6591502 -113692810 - URR1A DNA MER1_type 0 226 58 1 635 365 319 87 36 chr13 6593422 6593617 -113690695 + MER46C DNA MER2_type 134 338 0 1 635 400 355 59 16 chr13 6594738 6594924 -113689388 - MER20 DNA MER1_type 0 219 26 1 635 189 94 0 0 chr13 6595152 6595184 -113689128 + (A)n Simple_repeat Simple_repeat 1 32 0 1 635 414 335 15 34 chr13 6595658 6595796 -113688516 + RMER30 DNA MER1_type 2 135 -67 1 635 212 0 36 0 chr13 6595796 6595824 -113688488 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 635 414 335 15 34 chr13 6595824 6595889 -113688423 + RMER30 DNA MER1_type 136 200 -2 1 635 232 231 58 0 chr13 6598479 6598531 -113685781 + PB1D7 SINE Alu 66 120 0 1 635 288 231 75 0 chr13 6598639 6598773 -113685539 + (TA)n Simple_repeat Simple_repeat 2 145 0 1 635 516 215 16 0 chr13 6599119 6599246 -113685066 + ORR1C1 LTR MaLR 203 364 -14 1 635 338 244 0 14 chr13 6599364 6599443 -113684869 - ID4_ SINE ID -69 83 6 1 635 846 191 143 5 chr13 6599624 6599813 -113684499 + B3 SINE B2 2 216 0 1 635 195 254 279 33 chr13 6600834 6601017 -113683295 + L2a LINE L2 2845 3072 -347 1 635 199 304 71 14 chr13 6601197 6601267 -113683045 + L2a LINE L2 3291 3364 -62 1 635 189 358 116 0 chr13 6601378 6601473 -113682839 + MIR SINE MIR 96 201 -61 1 635 234 261 186 18 chr13 6602410 6602523 -113681789 - B3A SINE B2 -14 184 53 1 635 295 73 36 0 chr13 6603422 6603477 -113680835 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 1 635 399 41 0 0 chr13 6603478 6603527 -113680785 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 635 394 315 46 0 chr13 6612319 6612427 -113671885 - PB1D10 SINE Alu 0 117 5 1 635 465 19 0 0 chr13 6612455 6612509 -113671803 + (TTTTG)n Simple_repeat Simple_repeat 3 56 0 1 635 1100 60 0 0 chr13 6612509 6612643 -113671669 - B1_Mus2 SINE Alu -11 136 3 1 635 350 241 25 12 chr13 6613130 6613210 -113671102 + ID2 SINE ID 2 82 -1 1 635 217 352 23 0 chr13 6613234 6613322 -113670990 + PB1D10 SINE Alu 7 96 -21 1 635 1985 155 86 14 chr13 6615081 6615440 -113668872 + ORR1B1 LTR MaLR 1 385 -9 1 635 897 275 116 14 chr13 6616026 6616303 -113668009 + MTD LTR MaLR 110 414 -5 1 635 1504 67 0 10 chr13 6616622 6616819 -113667493 - B2_Mm2 SINE B2 0 195 1 1 635 182 105 26 0 chr13 6616897 6616935 -113667377 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 1 635 207 0 0 0 chr13 6617655 6617678 -113666634 + (T)n Simple_repeat Simple_repeat 1 23 0 1 635 181 293 35 0 chr13 6618872 6618930 -113665382 + L3 LINE CR1 3580 3639 -850 1 635 799 224 38 33 chr13 6619032 6619244 -113665068 - ID_B1 SINE B4 -7 217 5 1 635 320 299 24 57 chr13 6620837 6620961 -113663351 + PB1D9 SINE Alu 1 120 0 1 635 969 115 0 0 chr13 6621994 6622133 -113662179 + B1_Mus1 SINE Alu 1 139 -9 1 635 232 224 70 101 chr13 6622017 6622146 -113662166 - YREP_Mm Unknown Unknown -1518 294 170 1 635 360 0 0 0 chr13 6622736 6622776 -113661536 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 635 455 273 16 74 chr13 6623601 6623791 -113660521 + B3A SINE B2 2 180 -18 1 635 279 326 92 40 chr13 6623824 6624016 -113660296 + MTEb LTR MaLR 10 217 -142 1 635 355 287 72 22 chr13 6624061 6624200 -113660112 + MTEb LTR MaLR 226 371 -8 1 635 183 80 0 0 chr13 6624634 6624659 -113659653 + (CAAT)n Simple_repeat Simple_repeat 3 27 0 1 635 913 268 23 23 chr13 6625274 6625492 -113658820 - ID_B1 SINE B4 -6 218 1 1 635 294 272 15 74 chr13 6625907 6626042 -113658270 + MARNA DNA Mariner 147 273 -313 1 635 336 266 140 29 chr13 6626544 6626709 -113657603 + L1M2 LINE L1 3109 3290 -2856 1 635 507 332 21 8 chr13 6626719 6626899 -113657413 - B3A SINE B2 0 216 27 1 635 711 190 13 53 chr13 6626934 6627084 -113657228 + B1_Mur3 SINE Alu 1 144 -5 1 635 252 0 0 0 chr13 6627166 6627194 -113657118 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 635 236 227 76 0 chr13 6627196 6627262 -113657050 - Lx9 LINE L1 -160 7484 7414 1 635 669 230 93 0 chr13 6627260 6627421 -113656891 + Lx9 LINE L1 7261 7436 -208 1 635 463 273 107 0 chr13 6627456 6627577 -113656735 - B1F SINE Alu -7 142 9 1 635 218 368 105 6 chr13 6627577 6627618 -113656694 - B4A SINE B4 -62 197 42 1 635 544 300 55 45 chr13 6629145 6629365 -113654947 - ID_B1 SINE B4 -1 223 2 1 635 253 255 19 47 chr13 6630219 6630326 -113653986 + GA-rich Low_complexity Low_complexity 2 105 0 1 635 1621 113 168 50 chr13 6630425 6630613 -113653699 - RMER17C LTR ERVK -3 407 184 1 635 486 46 0 0 chr13 6630613 6630678 -113653634 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 635 1621 113 168 50 chr13 6630678 6630853 -113653459 - RMER17C LTR ERVK -227 183 1 1 635 281 325 15 38 chr13 6631003 6631134 -113653178 + MER20 DNA MER1_type 77 204 -15 1 635 409 239 44 22 chr13 6631419 6631509 -113652803 - ID_B1 SINE B4 -8 216 125 1 635 270 246 255 21 chr13 6632024 6632165 -113652147 + MLT2C2 LTR ERVL 381 554 -8 1 635 245 336 102 22 chr13 6632548 6632685 -113651627 - MER20 DNA MER1_type -34 185 38 1 635 456 35 0 0 chr13 6633169 6633227 -113651085 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 635 375 298 13 96 chr13 6634084 6634240 -113650072 - B4A SINE B4 -147 145 3 1 635 324 275 61 40 chr13 6634682 6634830 -113649482 - Lx8 LINE L1 -1564 5909 5759 1 635 555 324 69 59 chr13 6636260 6636549 -113647763 + B4A SINE B4 1 292 0 1 635 905 130 8 0 chr13 6636713 6636844 -113647468 + B1_Mur4 SINE Alu 2 133 -17 1 635 21 0 0 0 chr13 6636847 6636868 -113647444 + GC_rich Low_complexity Low_complexity 1 21 0 1 635 720 177 13 45 chr13 6638874 6639028 -113645284 + B1_Mur3 SINE Alu 1 149 0 1 635 286 133 0 0 chr13 6639401 6639446 -113644866 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 635 598 195 24 0 chr13 6639448 6639617 -113644695 + (TATATG)n Simple_repeat Simple_repeat 4 176 0 1 635 789 212 0 0 chr13 6639650 6640008 -113644304 + (TG)n Simple_repeat Simple_repeat 1 358 0 2 635 618 221 103 26 chr13 6640605 6640800 -113643512 + B3 SINE B2 1 210 -6 2 635 289 250 27 14 chr13 6643481 6643554 -113640758 + ID2 SINE ID 1 74 -9 2 635 469 148 88 21 chr13 6643679 6643783 -113640529 + B1_Mur4 SINE Alu 41 150 0 2 635 548 272 42 24 chr13 6643780 6643946 -113640366 - MER2 DNA MER2_type -84 261 93 2 635 209 303 67 0 chr13 6644364 6644453 -113639859 + MIRc SINE MIR 59 153 -115 2 635 264 264 100 33 chr13 6644724 6644814 -113639498 - RSINE1 SINE B4 -57 108 13 2 635 333 0 0 0 chr13 6648785 6648822 -113635490 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 2 635 195 368 37 28 chr13 6649281 6649390 -113634922 + MER5A DNA MER1_type 75 184 -5 2 635 207 0 0 0 chr13 6649837 6649860 -113634452 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 635 924 79 0 0 chr13 6649928 6650054 -113634258 - B1_Mm SINE Alu -21 126 1 2 635 275 261 0 30 chr13 6650054 6650081 -113634231 - ORR1B1-int LTR MaLR -862 647 625 2 635 260 27 27 0 chr13 6650576 6650613 -113633699 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 635 301 70 35 0 chr13 6650990 6651047 -113633265 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 2 635 700 251 39 10 chr13 6651165 6651370 -113632942 + ID_B1 SINE B4 1 211 -13 2 635 455 358 44 44 chr13 6651411 6651639 -113632673 + B4 SINE B4 47 274 -18 2 635 222 37 0 0 chr13 6651650 6651677 -113632635 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 635 1269 258 76 8 chr13 6651958 6652221 -113632091 + L1MA9 LINE L1 5519 5796 -516 2 635 441 66 0 0 chr13 6652221 6652282 -113632030 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 635 1269 267 65 32 chr13 6652282 6652562 -113631750 + L1MA9 LINE L1 5797 6063 -228 2 635 538 344 94 22 chr13 6652597 6652915 -113631397 + ORR1E LTR MaLR 11 351 -8 2 635 1317 90 20 10 chr13 6652932 6653134 -113631178 - L1_Mus3 LINE L1 -5 6633 6430 2 635 1014 147 31 0 chr13 6653135 6653298 -113631014 + L1_Mus3 LINE L1 6253 6420 -218 2 635 1205 28 14 0 chr13 6654203 6654347 -113629965 - B1_Mus1 SINE Alu -1 147 2 2 635 201 108 0 0 chr13 6655156 6655193 -113629119 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 635 288 0 0 0 chr13 6655380 6655412 -113628900 + (TC)n Simple_repeat Simple_repeat 2 33 0 2 635 945 65 0 0 chr13 6655412 6655550 -113628762 + (CA)n Simple_repeat Simple_repeat 1 138 0 2 635 181 314 0 28 chr13 6655636 6655708 -113628604 - L2 LINE L2 -2806 613 544 2 635 626 273 64 50 chr13 6655866 6656086 -113628226 + ID_B1 SINE B4 2 224 0 2 635 756 61 0 0 chr13 6656420 6656518 -113627794 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 2 635 249 119 0 0 chr13 6656992 6657034 -113627278 + (CAT)n Simple_repeat Simple_repeat 2 43 0 2 635 359 295 48 0 chr13 6657090 6657195 -113627117 - PB1D10 SINE Alu -7 110 1 2 635 820 251 6 0 chr13 6657195 6657275 -113627037 - ID SINE ID -143 81 1 2 635 340 323 26 85 chr13 6657496 6657702 -113626610 - L1M2 LINE L1 -900 5243 5039 2 635 980 132 0 6 chr13 6657702 6657869 -113626443 + (TTCC)n Simple_repeat Simple_repeat 3 168 0 2 635 1086 116 0 0 chr13 6657873 6658020 -113626292 - B1_Mus1 SINE Alu 0 148 2 2 635 340 323 26 85 chr13 6658020 6658079 -113626233 - L1M2 LINE L1 -1105 5038 4989 2 635 249 315 0 0 chr13 6658139 6658212 -113626100 - ID4_ SINE ID -9 74 2 2 635 201 196 0 0 chr13 6658940 6658986 -113625326 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 635 508 225 157 100 chr13 6658986 6659203 -113625109 - B4A SINE B4 0 292 68 2 635 255 290 86 48 chr13 6659203 6659308 -113625004 - PB1D10 SINE Alu -2 115 7 2 635 383 203 27 0 chr13 6659503 6659577 -113624735 - MLT1B LTR MaLR 0 390 315 2 635 235 289 78 9 chr13 6659747 6659862 -113624450 - Lx9 LINE L1 -214 7430 7308 2 635 2062 169 77 18 chr13 6659899 6660291 -113624021 + MTC LTR MaLR 2 416 -5 2 635 497 287 8 8 chr13 6660359 6660489 -113623823 - Lx9 LINE L1 -469 7175 7046 2 635 543 31 0 0 chr13 6660606 6660671 -113623641 + (TG)n Simple_repeat Simple_repeat 1 65 0 2 635 216 0 0 0 chr13 6660671 6660694 -113623618 + (GA)n Simple_repeat Simple_repeat 1 24 0 2 635 335 318 37 37 chr13 6660705 6660839 -113623473 - MLT1A LTR MaLR -240 134 1 2 635 328 333 35 62 chr13 6661146 6661405 -113622907 + RMER12 LTR ERVK 735 986 -336 2 635 219 69 0 0 chr13 6661735 6661764 -113622548 + (T)n Simple_repeat Simple_repeat 1 29 0 2 635 348 376 0 0 chr13 6662298 6662553 -113621759 + (TG)n Simple_repeat Simple_repeat 1 255 0 2 635 228 227 0 0 chr13 6662627 6662715 -113621597 + (TG)n Simple_repeat Simple_repeat 1 88 0 2 635 290 350 13 13 chr13 6662716 6662939 -113621373 + (TATG)n Simple_repeat Simple_repeat 1 223 0 2 635 2726 75 2 135 chr13 6663205 6663665 -113620647 - RLTR9D LTR ERVK -3 400 2 2 635 180 0 0 0 chr13 6664105 6664125 -113620187 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 635 267 211 10 21 chr13 6664253 6664350 -113619962 + GA-rich Low_complexity Low_complexity 3 98 0 2 635 181 186 0 48 chr13 6664648 6664710 -113619602 + GA-rich Low_complexity Low_complexity 3 61 0 2 635 249 246 16 0 chr13 6665658 6665719 -113618593 + GA-rich Low_complexity Low_complexity 5 66 0 2 635 21 36 0 0 chr13 6666603 6666631 -113617681 + AT_rich Low_complexity Low_complexity 1 28 0 2 635 202 182 0 0 chr13 6666654 6666687 -113617625 + (TTG)n Simple_repeat Simple_repeat 2 34 0 2 635 213 225 0 0 chr13 6666688 6666728 -113617584 - ID2 SINE ID -2 81 42 2 635 228 191 0 60 chr13 6666693 6666743 -113617569 - tRNA-Ala-GCA tRNA tRNA -5 70 24 2 635 594 294 6 45 chr13 6666775 6666953 -113617359 - B4 SINE B4 0 292 122 2 635 218 222 0 0 chr13 6666961 6667006 -113617306 + T-rich Low_complexity Low_complexity 1 45 0 2 635 38746 31 1 1 chr13 6667028 6673885 -113610427 - L1Md_T LINE L1 0 6585 1 2 635 702 212 7 0 chr13 6673965 6674111 -113610201 - B1_Mm SINE Alu 0 147 1 2 635 1223 207 55 169 chr13 6674837 6675276 -113609036 + RLTR24 LTR ERV1 9 415 -114 2 635 1209 106 0 0 chr13 6675276 6675456 -113608856 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 635 1223 207 55 169 chr13 6675456 6675603 -113608709 + RLTR24 LTR ERV1 416 528 -1 2 635 348 24 0 0 chr13 6676220 6676261 -113608051 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 635 2261 185 142 127 chr13 6677254 6678110 -113606202 - RLTR19-int LTR ERVK -1757 4380 3512 2 635 1817 231 53 34 chr13 6678144 6678651 -113605661 - RMER19C LTR ERVK -16 595 79 2 635 2968 71 148 0 chr13 6678878 6679298 -113605014 - RLTR45 LTR ERVK 0 482 1 2 635 2473 229 106 65 chr13 6679318 6680214 -113604098 - RLTR19-int LTR ERVK -2947 3190 2258 2 635 325 274 83 87 chr13 6680400 6680700 -113603612 - MTC-int LTR MaLR -50 1208 910 2 635 279 183 90 2 chr13 6680692 6680758 -113603554 - MTC-int LTR MaLR -715 543 465 2 635 662 178 16 82 chr13 6680759 6680943 -113603369 - RLTR19-int LTR ERVK -4970 1167 996 2 635 310 258 75 11 chr13 6680933 6681027 -113603285 - RLTR19-int LTR ERVK -3727 1795 1696 2 635 342 155 33 67 chr13 6681106 6681196 -113603116 - RLTR19-int LTR ERVK -5161 976 890 2 635 489 271 57 0 chr13 6681260 6681400 -113602912 - RLTR42-int LTR ERVK -4265 1257 1110 2 635 582 54 0 0 chr13 6681920 6681994 -113602318 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 635 941 171 6 6 chr13 6681994 6682171 -113602141 - B2_Mm2 SINE B2 -17 178 2 2 635 7734 58 21 5 chr13 6682870 6684407 -113599905 - L1Md_F2 LINE L1 -1 6581 5026 2 79 8820 61 2 1 chr13 6684404 6685523 -113598789 + L1Md_F2 LINE L1 3927 5046 -837 2 636 638 154 8 0 chr13 6686170 6686232 -113598080 + polypurine Low_complexity Low_complexity 2 63 0 2 636 1023 156 0 0 chr13 6686232 6686411 -113597901 + GA-rich Low_complexity Low_complexity 1 179 0 2 636 638 154 8 0 chr13 6686411 6686471 -113597841 + polypurine Low_complexity Low_complexity 64 124 0 2 636 224 316 79 0 chr13 6687701 6687777 -113596535 - B4 SINE B4 -210 82 1 2 636 234 0 0 0 chr13 6688835 6688861 -113595451 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2 636 3905 212 137 15 chr13 6688862 6690152 -113594160 - RMER1A Other Other -10 1020 1 2 636 406 173 35 96 chr13 6690203 6690318 -113593994 + RMER13B LTR ERVK 1 108 -800 2 636 1897 216 16 80 chr13 6690313 6690922 -113593390 + RMER13B LTR ERVK 365 933 -25 2 636 859 260 5 18 chr13 6691120 6691343 -113592969 - ID_B1 SINE B4 0 224 5 2 636 2278 135 63 29 chr13 6691767 6692148 -113592164 + ORR1B1 LTR MaLR 1 394 0 2 636 258 321 105 23 chr13 6692171 6692343 -113591969 - RMER20B LTR ERVK 0 516 331 2 636 4428 174 61 17 chr13 6692345 6693214 -113591098 - RMER13B LTR ERVK 0 908 2 2 636 556 204 34 0 chr13 6693329 6693486 -113590826 - RMER20B LTR ERVK -355 161 1 2 636 320 367 43 4 chr13 6693487 6693766 -113590546 - L1M4 LINE L1 -356 5823 5534 2 636 1167 245 118 8 chr13 6693782 6694164 -113590148 + MTD LTR MaLR 3 419 0 2 636 382 330 0 0 chr13 6694214 6694329 -113589983 + PB1D10 SINE Alu 1 115 -2 2 636 267 240 127 8 chr13 6694376 6694502 -113589810 - L1M4 LINE L1 -791 5355 5215 2 636 510 242 32 24 chr13 6694542 6694665 -113589647 + ID_B1 SINE B4 91 214 -10 2 636 672 13 0 0 chr13 6694820 6694897 -113589415 + (TC)n Simple_repeat Simple_repeat 2 78 0 2 636 911 300 27 8 chr13 6694943 6695205 -113589107 - B4 SINE B4 -19 273 7 2 636 333 0 0 0 chr13 6695293 6695330 -113588982 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 636 672 124 0 0 chr13 6695911 6696016 -113588296 + (GA)n Simple_repeat Simple_repeat 2 106 0 2 636 41437 13 1 6 chr13 6696276 6702470 -113581842 - L1Md_A LINE L1 0 6582 423 2 636 754 268 127 8 chr13 6702529 6702789 -113581523 + MTD LTR MaLR 129 419 0 2 636 239 156 0 0 chr13 6703082 6703127 -113581185 + Lx4A LINE L1 7014 7058 0 2 636 245 242 32 32 chr13 6703411 6703505 -113580807 + (TATG)n Simple_repeat Simple_repeat 3 96 0 2 636 701 325 60 28 chr13 6703509 6703791 -113580521 - B4A SINE B4 0 292 2 2 636 180 0 0 0 chr13 6704124 6704144 -113580168 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 636 807 260 56 96 chr13 6704162 6704478 -113579834 + L1VL1 LINE L1 4 496 -5926 2 636 29978 120 26 48 chr13 6704614 6707122 -113577190 + L1Md_F2 LINE L1 522 3057 -2826 3 636 1121 97 0 7 chr13 6707122 6707268 -113577044 + B1_Mm SINE Alu 2 146 -1 3 636 29978 91 13 49 chr13 6707268 6710717 -113573595 + L1Md_F2 LINE L1 3058 6288 -294 3 636 4505 12 2 0 chr13 6710717 6711209 -113573103 + MT2_Mm LTR ERVL 1 493 0 3 636 38130 15 0 0 chr13 6711236 6715414 -113568898 + MERVL-int LTR ERVL 1182 5360 -125 3 636 362 167 46 35 chr13 6715414 6715501 -113568811 + ORR1A3-int LTR MaLR 553 640 -1323 3 636 321 0 0 0 chr13 6715501 6715539 -113568773 + MERVL-int LTR ERVL 5448 5485 0 3 636 4505 12 2 0 chr13 6715539 6716031 -113568281 + MT2_Mm LTR ERVL 1 493 0 3 636 2131 88 3 13 chr13 6716031 6716332 -113567980 + L1Md_F2 LINE L1 6284 6581 -1 3 636 7088 66 41 16 chr13 6716625 6717773 -113566539 + L1_Mus2 LINE L1 5288 6483 -83 3 636 3468 23 5 0 chr13 6717773 6718167 -113566145 - MTA_Mm LTR MaLR 0 396 1 3 636 7088 60 45 22 chr13 6718167 6718267 -113566045 + L1_Mus2 LINE L1 6484 6565 -1 3 636 959 239 33 4 chr13 6718462 6718702 -113565610 + Lx6 LINE L1 7214 7460 0 3 636 1101 134 41 0 chr13 6718738 6718910 -113565402 + B2_Mm2 SINE B2 2 180 -15 3 636 375 186 61 199 chr13 6719342 6719523 -113564789 + RMER15 LTR ERVL 29 184 -391 3 636 613 292 47 9 chr13 6719558 6719769 -113564543 - ID_B1 SINE B4 -2 222 4 3 636 322 196 0 0 chr13 6719813 6719869 -113564443 - ID2 SINE ID -26 57 2 3 636 297 230 0 33 chr13 6719869 6719959 -113564353 + T-rich Low_complexity Low_complexity 3 89 0 3 636 656 224 33 47 chr13 6719960 6720110 -113564202 - B1F SINE Alu -1 148 1 3 636 660 26 0 0 chr13 6720173 6720251 -113564061 + (TC)n Simple_repeat Simple_repeat 2 79 0 3 636 247 150 0 0 chr13 6720584 6720624 -113563688 - tRNA-Val-GTG tRNA tRNA -36 40 1 3 636 1731 177 12 25 chr13 6720633 6720958 -113563354 + Lx5 LINE L1 6727 7047 -3 3 636 4430 111 22 27 chr13 6721014 6721728 -113562584 - Lx3C LINE L1 -318 6658 5948 3 636 41857 7 0 0 chr13 6721728 6728309 -113556003 - L1Md_A LINE L1 0 6582 1 3 636 3246 123 62 0 chr13 6728302 6728886 -113555426 - Lx3C LINE L1 -1009 5964 5359 3 636 38993 44 0 3 chr13 6728881 6735332 -113548980 - L1Md_T LINE L1 0 6585 59 3 636 1257 137 3 127 chr13 6735328 6735612 -113548700 - Lx3C LINE L1 -510 5376 5128 3 636 3968 103 5 20 chr13 6735600 6736185 -113548127 + Lx3C LINE L1 4553 5128 -758 3 636 183 42 0 0 chr13 6736318 6736342 -113547970 + (A)n Simple_repeat Simple_repeat 1 24 0 3 636 414 331 13 52 chr13 6737338 6737491 -113546821 + RSINE1 SINE B4 6 152 -13 3 636 298 294 45 34 chr13 6737527 6737593 -113546719 + B4 SINE B4 202 271 -21 3 636 975 100 0 0 chr13 6737593 6737743 -113546569 + (CA)n Simple_repeat Simple_repeat 2 151 0 3 636 298 294 45 34 chr13 6737743 6737764 -113546548 + B4 SINE B4 272 290 -2 3 636 276 312 123 12 chr13 6738417 6738579 -113545733 + MIRc SINE MIR 6 185 -83 3 636 880 130 7 34 chr13 6739065 6739337 -113544975 + (CA)n Simple_repeat Simple_repeat 1 264 0 3 636 660 125 47 8 chr13 6739350 6739589 -113544723 + (CA)n Simple_repeat Simple_repeat 1 248 0 3 636 1484 282 61 53 chr13 6739589 6740230 -113544082 - Lx9 LINE L1 -128 7516 6871 3 636 721 238 130 162 chr13 6741036 6741437 -113542875 - MTD LTR MaLR -14 405 18 3 636 349 302 10 10 chr13 6742073 6742170 -113542142 + RSINE1 SINE B4 8 104 -61 3 636 774 259 54 14 chr13 6742287 6742510 -113541802 + B4A SINE B4 2 233 -59 3 636 333 0 0 0 chr13 6742552 6742589 -113541723 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 636 227 281 112 79 chr13 6742596 6742685 -113541627 - Tigger5 DNA MER2_type -2314 92 1 3 636 463 246 9 0 chr13 6743044 6743158 -113541154 + MIR SINE MIR 122 236 -26 3 636 459 300 149 31 chr13 6743499 6744093 -113540219 + L1MB5 LINE L1 5280 5941 -237 3 636 23 0 0 0 chr13 6744492 6744515 -113539797 + AT_rich Low_complexity Low_complexity 1 23 0 3 636 203 103 0 25 chr13 6744572 6744612 -113539700 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 636 220 154 0 37 chr13 6745867 6745921 -113538391 + A-rich Low_complexity Low_complexity 4 55 0 3 636 24 32 0 0 chr13 6746615 6746646 -113537666 + AT_rich Low_complexity Low_complexity 1 31 0 3 636 690 249 31 63 chr13 6746651 6746874 -113537438 + B3 SINE B2 1 216 0 3 636 242 179 0 18 chr13 6747175 6747232 -113537080 + CT-rich Low_complexity Low_complexity 1 56 0 3 636 1510 6 0 11 chr13 6747232 6747413 -113536899 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 3 636 636 14 0 0 chr13 6747414 6747487 -113536825 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 3 636 573 15 0 0 chr13 6747487 6747552 -113536760 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 3 636 266 255 47 75 chr13 6747583 6747689 -113536623 + PB1D9 SINE Alu 10 112 -8 3 636 454 309 102 38 chr13 6748978 6749298 -113535014 + ORR1E LTR MaLR 3 375 -4 3 636 812 162 4 0 chr13 6749485 6749771 -113534541 + (CA)n Simple_repeat Simple_repeat 1 287 0 3 636 1008 360 52 48 chr13 6749905 6750146 -113534166 - MER82 DNA MER2_type -11 642 405 3 636 450 0 0 0 chr13 6750146 6750196 -113534116 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 636 1008 360 52 48 chr13 6750196 6750593 -113533719 - MER82 DNA MER2_type -249 404 2 3 636 285 51 0 0 chr13 6750723 6750762 -113533550 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 3 636 367 355 31 31 chr13 6751005 6751200 -113533112 - ORR1E LTR MaLR -164 195 1 3 636 762 316 51 10 chr13 6751869 6752064 -113532248 - B4 SINE B4 -7 285 83 3 636 232 48 0 45 chr13 6752068 6752112 -113532200 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 3 636 187 323 0 0 chr13 6752282 6752344 -113531968 - L2c LINE L2 -4 3383 3322 3 636 1196 281 22 7 chr13 6752853 6753129 -113531183 - B4 SINE B4 -12 280 1 3 636 5114 91 40 73 chr13 6753455 6754212 -113530100 + Lx3C LINE L1 6238 6969 -7 3 636 1112 268 8 4 chr13 6755447 6755694 -113528618 + B4A SINE B4 42 289 -3 3 636 186 208 0 0 chr13 6755718 6755771 -113528541 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 636 226 82 40 20 chr13 6756620 6756670 -113527642 + (CAGAGA)n Simple_repeat Simple_repeat 2 52 0 3 636 432 82 0 0 chr13 6756867 6756928 -113527384 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 636 259 301 80 14 chr13 6757052 6757264 -113527048 + Charlie5 DNA MER1_type 2356 2581 -43 3 636 416 270 146 10 chr13 6758409 6758615 -113525697 + RMER15 LTR ERVL 342 575 0 3 636 192 77 0 0 chr13 6758616 6758642 -113525670 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 636 450 0 0 0 chr13 6759300 6759350 -113524962 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 636 6787 36 0 0 chr13 6760066 6760822 -113523490 + L1Md_T LINE L1 5827 6582 0 3 636 1306 27 7 0 chr13 6760838 6760984 -113523328 + B1_Mm SINE Alu 1 147 0 3 636 12423 23 0 0 chr13 6761325 6762742 -113521570 + L1Md_T LINE L1 4170 5586 -297 3 636 9601 5 0 0 chr13 6762742 6763738 -113520574 + L1Md_T LINE L1 5587 6582 0 3 636 333 0 0 0 chr13 6763759 6763796 -113520516 + (A)n Simple_repeat Simple_repeat 1 37 0 3 636 229 148 16 32 chr13 6764658 6764721 -113519591 + (CATA)n Simple_repeat Simple_repeat 1 62 0 3 636 645 322 105 25 chr13 6764907 6765222 -113519090 - MER2 DNA MER2_type -5 340 1 3 636 26 0 0 0 chr13 6765244 6765270 -113519042 + AT_rich Low_complexity Low_complexity 1 26 0 3 636 260 287 55 151 chr13 6765649 6765920 -113518392 + ORR1E LTR MaLR 59 303 -56 3 636 24 77 0 0 chr13 6766683 6766735 -113517577 + AT_rich Low_complexity Low_complexity 1 52 0 3 636 388 306 230 7 chr13 6768109 6768257 -113516055 - B3A SINE B2 -16 182 2 3 636 446 292 39 0 chr13 6768520 6768650 -113515662 - ID_B1 SINE B4 0 224 90 3 636 474 157 0 0 chr13 6768688 6768771 -113515541 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 3 636 3391 36 51 0 chr13 6768788 6769179 -113515133 + RLTR10A LTR ERVK 1 411 0 3 636 631 164 27 0 chr13 6769201 6769311 -113515001 - B1_Mur3 SINE Alu -1 148 36 3 636 1164 269 29 21 chr13 6769334 6769615 -113514697 - B4 SINE B4 0 292 10 3 636 23 0 0 0 chr13 6769788 6769811 -113514501 + AT_rich Low_complexity Low_complexity 1 23 0 3 636 316 328 92 50 chr13 6770125 6770385 -113513927 + B4A SINE B4 2 272 -20 3 636 216 333 20 40 chr13 6770500 6770600 -113513712 + B2_Mm2 SINE B2 4 101 -94 3 636 713 22 22 0 chr13 6771455 6771545 -113512767 + (TCTA)n Simple_repeat Simple_repeat 4 95 0 3 636 613 291 43 66 chr13 6771615 6771839 -113512473 - B4 SINE B4 -2 290 93 3 636 806 328 45 38 chr13 6772026 6772425 -113511887 + MLT2D LTR ERVL 2 403 -11 3 636 983 60 139 13 chr13 6772506 6772657 -113511655 + B2_Mm2 SINE B2 2 171 -24 3 636 241 243 27 0 chr13 6772751 6772825 -113511487 + MER2 DNA MER2_type 108 183 -162 3 636 490 158 10 87 chr13 6772827 6772931 -113511381 - ORR1B2 LTR MaLR -2 365 270 3 636 438 69 0 0 chr13 6772931 6772989 -113511323 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 3 636 6359 83 5 0 chr13 6772989 6773780 -113510532 - L1_Mus1 LINE L1 -6 6561 5767 3 636 13742 84 13 1 chr13 6773780 6775605 -113508707 + L1_Mus1 LINE L1 3940 5787 -96 3 636 986 248 106 0 chr13 6775605 6775717 -113508595 - ORR1B2 LTR MaLR -93 274 148 3 636 602 60 12 0 chr13 6775717 6775800 -113508512 + (GA)n Simple_repeat Simple_repeat 1 84 0 3 636 986 248 106 0 chr13 6775800 6775933 -113508379 - ORR1B2 LTR MaLR -220 147 4 3 636 217 135 0 55 chr13 6776200 6776255 -113508057 + T-rich Low_complexity Low_complexity 4 55 0 3 636 1888 204 19 7 chr13 6777067 6777439 -113506873 + MTC LTR MaLR 1 421 0 3 636 361 330 0 10 chr13 6777466 6777564 -113506748 + PB1D10 SINE Alu 1 97 -20 3 636 36253 34 1 0 chr13 6777650 6783510 -113500802 + L1Md_T LINE L1 1 5589 -297 3 636 9562 6 0 0 chr13 6783510 6784532 -113499780 + L1Md_T LINE L1 5590 6585 0 3 636 1073 310 82 32 chr13 6784578 6785288 -113499024 + L1_Mur3 LINE L1 4995 5739 -141 3 636 303 301 88 83 chr13 6785296 6785477 -113498835 - HAL1-3A_ME LINE L1 -391 2467 2286 3 636 224 195 0 0 chr13 6785478 6785519 -113498793 + CT-rich Low_complexity Low_complexity 1 41 0 3 636 846 180 0 41 chr13 6785946 6786091 -113498221 - B1_Mur1 SINE Alu -5 144 6 3 636 395 284 17 104 chr13 6785970 6786143 -113498169 - MT2B LTR ERVL -325 276 119 3 636 465 276 0 0 chr13 6786955 6787053 -113497259 - RSINE1 SINE B4 0 165 68 4 636 307 293 79 83 chr13 6788125 6788243 -113496069 + MLT1A LTR MaLR 7 123 -251 4 636 2389 98 3 77 chr13 6788243 6788300 -113496012 - ORR1A2 LTR MaLR 0 327 286 4 636 255 31 0 0 chr13 6788300 6788332 -113495980 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 636 1045 83 0 57 chr13 6788334 6788474 -113495838 - B1_Mm SINE Alu -15 132 1 4 636 1278 132 26 0 chr13 6788481 6788671 -113495641 - B2_Mm2 SINE B2 0 195 1 4 636 2389 98 3 77 chr13 6788671 6788955 -113495357 - ORR1A2 LTR MaLR -42 285 1 4 636 307 293 79 83 chr13 6788955 6789052 -113495260 + MLT1A LTR MaLR 124 217 -157 4 636 300 127 0 0 chr13 6789192 6789247 -113495065 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 4 636 1326 278 86 17 chr13 6789286 6789707 -113494605 + MLT1A-int LTR MaLR 19 468 -903 4 636 261 83 0 0 chr13 6789711 6789747 -113494565 + (GGGAGA)n Simple_repeat Simple_repeat 5 40 0 4 636 3743 242 83 18 chr13 6790310 6790663 -113493649 - RMER1A Other Other -7 1023 629 4 636 749 92 16 16 chr13 6790663 6790784 -113493528 - L1_Mus1 LINE L1 0 6567 6447 4 636 3743 242 83 18 chr13 6790784 6791374 -113492938 - RMER1A Other Other -402 628 20 4 636 716 301 174 6 chr13 6791375 6791740 -113492572 - RMER1B Other Other -517 549 25 4 636 689 242 158 22 chr13 6791768 6791996 -113492316 - RMER1B Other Other -705 361 103 4 636 773 146 7 0 chr13 6792480 6792617 -113491695 + T-rich Low_complexity Low_complexity 5 142 0 4 636 666 201 0 10 chr13 6792625 6792914 -113491398 + CT-rich Low_complexity Low_complexity 1 286 0 4 636 790 188 45 0 chr13 6792925 6793079 -113491233 - MTEb LTR MaLR -53 326 166 4 636 1782 257 244 35 chr13 6793086 6794087 -113490225 - RMER1C Other Other 0 1342 133 4 636 1947 120 4 4 chr13 6794737 6795012 -113489300 - Lx4A LINE L1 -162 6896 6622 4 636 4447 147 33 7 chr13 6795004 6795737 -113488575 + Lx4A LINE L1 5834 6585 -473 4 636 736 243 64 1 chr13 6796251 6796423 -113487889 - B3A SINE B2 -37 179 1 4 636 234 320 17 51 chr13 6797501 6797679 -113486633 + CT-rich Low_complexity Low_complexity 5 176 0 4 636 754 163 40 9 chr13 6798333 6798561 -113485751 + (TCTA)n Simple_repeat Simple_repeat 1 235 0 4 636 375 78 0 0 chr13 6798561 6798612 -113485700 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 4 636 241 238 54 34 chr13 6798612 6798693 -113485619 + (TCTA)n Simple_repeat Simple_repeat 2 87 0 4 636 285 29 0 0 chr13 6798693 6798727 -113485585 + (TTCC)n Simple_repeat Simple_repeat 4 37 0 4 636 241 238 54 34 chr13 6798727 6798734 -113485578 + (TCTA)n Simple_repeat Simple_repeat 3 9 0 4 636 235 241 17 17 chr13 6799888 6799947 -113484365 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 636 296 341 11 0 chr13 6799978 6800066 -113484246 - B4 SINE B4 -20 272 184 4 636 318 241 0 0 chr13 6800062 6800120 -113484192 - B4 SINE B4 -233 59 2 4 636 483 260 349 9 chr13 6800121 6800350 -113483962 - MLT1B LTR MaLR -73 317 11 4 636 232 268 112 10 chr13 6801005 6801103 -113483209 + LTR33 LTR ERVL 408 515 0 4 636 493 324 10 31 chr13 6802067 6802261 -113482051 + MER34A1 LTR ERV1 59 248 -339 4 636 263 326 0 89 chr13 6802414 6802515 -113481797 + MTEa LTR MaLR 1 92 -287 4 636 228 271 41 41 chr13 6802584 6802657 -113481655 + MTEa LTR MaLR 77 149 -210 4 636 1661 209 84 3 chr13 6803222 6803577 -113480735 + ORR1C2 LTR MaLR 1 384 0 4 636 746 305 37 0 chr13 6804579 6804825 -113479487 + L1MC1 LINE L1 6060 6314 -19 4 636 227 342 50 25 chr13 6805014 6805215 -113479097 + L1MEc LINE L1 160 365 -6035 4 636 649 240 14 90 chr13 6805473 6805684 -113478628 + Lx6 LINE L1 7248 7442 -18 4 636 426 20 0 0 chr13 6805684 6805735 -113478577 + (TAA)n Simple_repeat Simple_repeat 2 52 0 4 636 733 226 19 235 chr13 6806002 6806124 -113478188 + B3 SINE B2 1 79 -137 4 636 1213 40 0 0 chr13 6806124 6806272 -113478040 + L1Md_F2 LINE L1 6435 6582 0 4 636 733 226 19 235 chr13 6806272 6806409 -113477903 + B3 SINE B2 80 204 -12 4 636 3764 38 28 5 chr13 6806907 6807333 -113476979 - RLTR10C LTR ERVK 0 436 1 4 636 926 298 15 42 chr13 6807578 6807841 -113476471 + B4A SINE B4 1 256 -36 4 636 404 91 15 0 chr13 6807843 6807909 -113476403 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 636 584 336 146 45 chr13 6808515 6809064 -113475248 - Lx8 LINE L1 -2 7471 6868 4 636 358 221 93 42 chr13 6809386 6809504 -113474808 - MIRb SINE MIR -108 160 37 4 636 441 0 0 0 chr13 6809510 6809559 -113474753 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 4 636 667 240 8 30 chr13 6809592 6809725 -113474587 - RSINE1 SINE B4 -32 133 4 4 636 421 219 99 16 chr13 6809886 6810007 -113474305 - ID_B1 SINE B4 -8 216 86 4 636 580 280 96 0 chr13 6812114 6812271 -113472041 + B3A SINE B2 6 177 -21 4 636 21 0 0 0 chr13 6812737 6812758 -113471554 + AT_rich Low_complexity Low_complexity 1 21 0 4 636 761 243 27 22 chr13 6812770 6812955 -113471357 - B3A SINE B2 -10 188 3 4 636 649 317 45 0 chr13 6813296 6813520 -113470792 - Lx8 LINE L1 -141 7332 7099 4 636 270 257 40 0 chr13 6813535 6813609 -113470703 - B1F SINE Alu 0 149 73 4 636 233 330 23 0 chr13 6813609 6813623 -113470689 - ID_B1 SINE B4 0 224 135 4 636 641 133 10 0 chr13 6813635 6813733 -113470579 - RMER1B Other Other -387 679 581 4 636 1265 48 7 0 chr13 6814019 6814165 -113470147 - B1_Mus1 SINE Alu 0 148 2 4 636 271 407 15 0 chr13 6814357 6814492 -113469820 + B1F1 SINE Alu 2 138 -11 4 636 468 0 0 0 chr13 6814701 6814753 -113469559 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 636 1023 43 31 6 chr13 6814753 6814916 -113469396 + (TCTA)n Simple_repeat Simple_repeat 3 169 0 4 79 3409 254 41 77 chr13 6815148 6816273 -113468039 + Lx9 LINE L1 6370 7453 -191 4 637 213 82 61 0 chr13 6816279 6816328 -113467984 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 637 397 292 87 23 chr13 6817515 6817687 -113466625 - MLT1F1 LTR MaLR -11 558 376 4 637 602 335 37 5 chr13 6817699 6817915 -113466397 + ID_B1 SINE B4 2 224 0 4 637 334 294 45 53 chr13 6817922 6818055 -113466257 + RSINE1 SINE B4 34 165 0 4 637 4352 143 22 0 chr13 6818598 6819241 -113465071 - Lx LINE L1 0 6654 5998 4 637 38864 30 0 0 chr13 6819253 6825482 -113458830 - L1Md_T LINE L1 0 6585 260 4 637 3385 83 2 0 chr13 6825481 6825980 -113458332 - Lx LINE L1 -642 6012 5513 4 637 4779 76 23 6 chr13 6825977 6826666 -113457646 + MusHAL1 LINE L1 247 947 -1765 4 637 721 278 163 86 chr13 6826862 6827212 -113457100 - MTD LTR MaLR 0 379 3 4 637 247 262 0 16 chr13 6827319 6827381 -113456931 + CT-rich Low_complexity Low_complexity 2 62 0 4 637 2735 188 90 116 chr13 6827754 6828668 -113455644 - RLTR13D6 LTR ERVK -12 890 1 4 637 24 32 0 0 chr13 6829897 6829928 -113454384 + AT_rich Low_complexity Low_complexity 1 31 0 4 637 21 0 0 0 chr13 6830095 6830116 -113454196 + AT_rich Low_complexity Low_complexity 1 21 0 4 637 454 265 26 0 chr13 6830455 6830572 -113453740 + MTD LTR MaLR 1 120 -299 4 637 1227 215 136 0 chr13 6830577 6830692 -113453620 - Lx9 LINE L1 -1 7643 7495 4 637 3143 24 107 11 chr13 6830692 6831067 -113453245 - IAPLTR2a LTR ERVK 0 411 1 4 637 1227 215 136 0 chr13 6831067 6831281 -113453031 - Lx9 LINE L1 -150 7494 7270 4 637 949 220 155 34 chr13 6831287 6831551 -113452761 + MTD LTR MaLR 110 405 -14 4 637 336 323 35 135 chr13 6831777 6832088 -113452224 + LTR37A LTR ERV1 118 397 -29 4 637 205 185 0 30 chr13 6832149 6832216 -113452096 + T-rich Low_complexity Low_complexity 1 65 0 4 637 433 270 16 80 chr13 6833096 6833221 -113451091 + B4 SINE B4 10 126 -166 4 637 333 0 0 0 chr13 6833224 6833261 -113451051 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 637 216 248 0 0 chr13 6834464 6834581 -113449731 + (TG)n Simple_repeat Simple_repeat 1 117 0 4 637 284 246 81 16 chr13 6834581 6834643 -113449669 - ID4_ SINE ID -6 77 12 4 637 231 342 0 95 chr13 6834637 6834721 -113449591 - ID4 SINE ID -7 76 1 4 637 307 374 8 8 chr13 6834725 6834857 -113449455 - ID_B1 SINE B4 -6 218 87 4 637 841 280 56 39 chr13 6836372 6836658 -113447654 + B4 SINE B4 2 292 0 4 637 1011 151 0 6 chr13 6837185 6837501 -113446811 + CT-rich Low_complexity Low_complexity 1 313 0 4 637 374 247 83 171 chr13 6839463 6839644 -113444668 + RSINE1 SINE B4 1 165 0 4 637 21 57 0 0 chr13 6839665 6839700 -113444612 + AT_rich Low_complexity Low_complexity 1 35 0 4 637 4243 146 28 8 chr13 6839758 6840348 -113443964 - L1_Mur2 LINE L1 -97 5780 5176 4 637 306 73 0 0 chr13 6840348 6840389 -113443923 + (CAAT)n Simple_repeat Simple_repeat 2 42 0 4 637 4243 146 28 8 chr13 6840389 6840510 -113443802 - L1_Mur2 LINE L1 -702 5175 5055 4 637 2712 198 42 4 chr13 6840512 6841190 -113443122 + Lx4B LINE L1 6258 7000 -8 4 637 408 266 89 36 chr13 6841190 6841358 -113442954 - Lx5 LINE L1 -6 7044 6868 4 637 614 280 121 5 chr13 6841437 6841627 -113442685 - ID_B1 SINE B4 -3 221 10 4 637 432 0 0 0 chr13 6842193 6842241 -113442071 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 637 305 300 11 11 chr13 6842284 6842375 -113441937 - MIR3 SINE MIR -18 190 100 4 637 183 80 0 0 chr13 6842435 6842460 -113441852 + (TCC)n Simple_repeat Simple_repeat 3 27 0 4 637 258 256 62 25 chr13 6842607 6842687 -113441625 - PB1D7 SINE Alu -34 86 4 4 637 466 229 166 134 chr13 6842741 6843024 -113441288 - B4A SINE B4 0 292 1 4 637 180 0 0 0 chr13 6843657 6843677 -113440635 + (T)n Simple_repeat Simple_repeat 1 20 0 4 637 325 284 0 87 chr13 6843740 6843844 -113440468 - B4 SINE B4 -195 97 3 4 637 338 316 114 30 chr13 6843845 6844047 -113440265 + MER21B LTR ERV1 459 677 -186 4 637 227 203 14 28 chr13 6844704 6844775 -113439537 + A-rich Low_complexity Low_complexity 4 73 0 4 637 14287 78 2 1 chr13 6845694 6848253 -113436059 + L1Md_F3 LINE L1 446 2966 -2917 4 637 9284 51 9 2 chr13 6848251 6849057 -113435255 + L1Md_F3 LINE L1 4430 5234 -649 4 637 225 0 0 0 chr13 6849057 6849082 -113435230 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 637 9284 51 9 2 chr13 6849082 6849424 -113434888 + L1Md_F3 LINE L1 5235 5584 -299 4 637 8478 47 4 1 chr13 6849424 6850405 -113433907 + L1Md_F3 LINE L1 5587 6570 -14 4 637 336 304 89 59 chr13 6851007 6851210 -113433102 + LTR33A LTR ERVL 303 511 -9 5 637 2747 143 26 45 chr13 6853294 6853762 -113430550 + RMER6B LTR ERVK 1 459 -2 5 637 318 115 0 0 chr13 6853809 6853861 -113430451 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 637 687 57 0 0 chr13 6853861 6853948 -113430364 + (GA)n Simple_repeat Simple_repeat 1 88 0 5 637 550 269 85 0 chr13 6853949 6854090 -113430222 - RSINE1 SINE B4 -10 155 3 5 637 365 299 64 21 chr13 6855742 6855882 -113428430 - MLT1D LTR MaLR -353 152 7 5 637 6484 216 67 76 chr13 6856164 6857826 -113426486 + Lx6 LINE L1 5810 7456 -4 5 637 277 274 0 16 chr13 6858066 6858129 -113426183 + B3A SINE B2 84 145 -53 5 637 396 82 0 0 chr13 6858130 6858191 -113426121 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 637 268 233 119 109 chr13 6859008 6859210 -113425102 - RLTR25A LTR ERVK 0 1103 900 5 637 241 342 108 27 chr13 6860535 6860646 -113423666 - MLT1A1 LTR MaLR -28 380 261 5 637 2330 110 31 0 chr13 6862110 6862427 -113421885 + ORR1A2 LTR MaLR 1 327 0 5 637 378 0 0 0 chr13 6862511 6862553 -113421759 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 637 232 188 29 0 chr13 6863333 6863402 -113420910 + CT-rich Low_complexity Low_complexity 3 73 0 5 637 423 0 0 0 chr13 6865052 6865099 -113419213 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 637 315 49 0 0 chr13 6865099 6865139 -113419173 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 637 426 253 0 0 chr13 6865146 6865237 -113419075 - B1F SINE Alu -27 122 32 5 637 7864 75 1 6 chr13 6865276 6866720 -113417592 - L1_Mus1 LINE L1 -1 6566 5129 5 637 180 0 0 0 chr13 6867062 6867082 -113417230 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 5 637 1195 89 0 11 chr13 6867843 6868024 -113416288 + (TTCTC)n Simple_repeat Simple_repeat 1 179 0 5 637 748 121 0 54 chr13 6868026 6868367 -113415945 + CT-rich Low_complexity Low_complexity 1 322 0 5 637 338 82 41 0 chr13 6868369 6868418 -113415894 + (TCTCC)n Simple_repeat Simple_repeat 4 54 0 5 637 308 364 90 7 chr13 6868419 6868563 -113415749 - HAL1-3A_ME LINE L1 -419 2439 2284 5 637 303 132 0 42 chr13 6868564 6868600 -113415712 + polypyrimidine Low_complexity Low_complexity 38 71 0 5 637 261 0 0 0 chr13 6868600 6868629 -113415683 + (TCTCC)n Simple_repeat Simple_repeat 1 29 0 5 637 303 132 0 42 chr13 6868629 6868663 -113415649 + polypyrimidine Low_complexity Low_complexity 4 37 0 5 637 589 272 160 16 chr13 6868687 6868881 -113415431 - ID_B1 SINE B4 -2 222 1 5 637 250 315 14 0 chr13 6868892 6868965 -113415347 - ID4 SINE ID -2 81 8 5 637 335 288 38 12 chr13 6868975 6869085 -113415227 - PB1D10 SINE Alu -35 114 1 5 637 7426 175 42 45 chr13 6870055 6870484 -113413828 - Lx5 LINE L1 -1 7049 6653 5 637 1199 62 0 20 chr13 6870484 6870633 -113413679 - B1_Mus2 SINE Alu 0 147 2 5 637 10882 180 37 141 chr13 6870633 6874754 -113409558 - Lx5 LINE L1 -398 6652 3412 5 637 769 128 17 17 chr13 6874754 6874873 -113409439 + PB1D9 SINE Alu 2 120 0 5 637 10882 163 45 48 chr13 6874873 6875621 -113408691 - Lx5 LINE L1 -2466 3411 2635 5 637 198 0 0 0 chr13 6875621 6875643 -113408669 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 637 10882 163 45 48 chr13 6875643 6875892 -113408420 - Lx5 LINE L1 -3243 2634 2386 5 637 900 272 25 8 chr13 6876027 6876264 -113408048 - Lx8 LINE L1 -730 6743 6503 5 637 456 19 0 0 chr13 6876341 6876394 -113407918 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 637 679 291 62 14 chr13 6876586 6876795 -113407517 + Tigger5 DNA MER2_type 20 238 -2168 5 637 267 356 39 0 chr13 6876797 6876901 -113407411 + Tigger5 DNA MER2_type 2293 2400 -6 5 637 38887 31 1 1 chr13 6877049 6884099 -113400213 - L1Md_T LINE L1 0 6585 1 5 637 1232 249 53 3 chr13 6884457 6884739 -113399573 - MTD LTR MaLR -27 392 97 5 637 280 222 11 138 chr13 6885505 6885599 -113398713 - ID4_ SINE ID 0 83 2 5 637 26 50 0 0 chr13 6885875 6885915 -113398397 + AT_rich Low_complexity Low_complexity 1 40 0 5 637 218 189 0 0 chr13 6885966 6886003 -113398309 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 637 813 54 0 0 chr13 6886700 6886811 -113397501 + (TG)n Simple_repeat Simple_repeat 2 112 0 5 637 591 316 64 48 chr13 6886812 6887061 -113397251 - B4A SINE B4 -18 274 22 5 637 5361 94 22 41 chr13 6888014 6888533 -113395779 + RLTR13C2 LTR ERVK 3 510 -298 5 637 243 0 0 0 chr13 6888533 6888560 -113395752 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 637 4181 58 0 24 chr13 6888569 6888646 -113395666 - L1Md_F2 LINE L1 -19 6563 6497 5 637 3500 58 35 4 chr13 6888646 6889110 -113395202 - RLTR45 LTR ERVK -4 478 1 5 637 4181 58 0 24 chr13 6889110 6889579 -113394733 - L1Md_F2 LINE L1 -86 6496 6030 5 637 5361 94 22 41 chr13 6889579 6889871 -113394441 + RLTR13C2 LTR ERVK 511 808 0 5 637 257 211 0 0 chr13 6890594 6890646 -113393666 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 637 327 246 148 65 chr13 6891306 6891424 -113392888 - Lx9 LINE L1 -10 7634 7518 5 637 291 28 0 0 chr13 6891424 6891460 -113392852 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 637 327 246 148 65 chr13 6891460 6891571 -113392741 - Lx9 LINE L1 -127 7517 7387 5 637 1011 227 11 35 chr13 6891562 6891822 -113392490 + Lx9 LINE L1 6958 7211 -433 5 637 458 311 126 5 chr13 6892069 6892276 -113392036 + MLT1B LTR MaLR 143 374 -16 5 637 657 277 17 11 chr13 6893364 6893543 -113390769 - B3A SINE B2 -18 180 1 5 637 234 0 0 0 chr13 6894919 6894945 -113389367 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 637 452 291 305 0 chr13 6894964 6895164 -113389148 - B4A SINE B4 -20 272 12 5 637 535 306 42 0 chr13 6895238 6895382 -113388930 - B3 SINE B2 -41 175 26 5 637 338 277 10 0 chr13 6895561 6895662 -113388650 + Lx7 LINE L1 7257 7358 -338 5 637 27 29 0 0 chr13 6895677 6895711 -113388601 + AT_rich Low_complexity Low_complexity 1 34 0 5 637 301 198 23 0 chr13 6895711 6895797 -113388515 + CT-rich Low_complexity Low_complexity 2 89 0 5 637 1066 222 67 55 chr13 6895799 6896128 -113388184 + Lx7 LINE L1 7364 7696 0 5 637 261 354 10 0 chr13 6896367 6896466 -113387846 + CT-rich Low_complexity Low_complexity 3 102 0 5 637 21 36 0 0 chr13 6896765 6896793 -113387519 + AT_rich Low_complexity Low_complexity 1 28 0 5 637 1115 151 32 0 chr13 6896839 6897024 -113387288 - B2_Mm2 SINE B2 -3 192 2 5 637 685 183 27 34 chr13 6897055 6897202 -113387110 - B2_Mm1a SINE B2 -44 149 4 5 637 480 184 0 0 chr13 6898252 6898350 -113385962 + (CAG)n Simple_repeat Simple_repeat 1 98 0 5 637 327 248 115 47 chr13 6899470 6899618 -113384694 - RSINE1 SINE B4 -6 159 2 5 637 1703 147 48 120 chr13 6899731 6900173 -113384139 + RMER17C LTR ERVK 1 410 0 5 637 378 0 0 0 chr13 6900577 6900619 -113383693 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 637 583 326 40 0 chr13 6900619 6900794 -113383518 - B4 SINE B4 -75 217 36 5 637 186 360 243 6 chr13 6901406 6901579 -113382733 + L2 LINE L2 449 662 -2757 5 637 922 271 40 36 chr13 6901612 6901941 -113382371 - Lx8 LINE L1 -2 7471 7142 5 637 247 0 51 26 chr13 6901944 6901983 -113382329 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 637 1065 72 0 0 chr13 6901983 6902121 -113382191 - B1_Mus1 SINE Alu -9 139 2 5 637 957 172 0 0 chr13 6902171 6902351 -113381961 + CT-rich Low_complexity Low_complexity 1 180 0 5 637 189 0 0 0 chr13 6902351 6902372 -113381940 + (TTTC)n Simple_repeat Simple_repeat 4 24 0 5 637 6406 168 34 7 chr13 6902405 6904582 -113379730 - Lx3C LINE L1 -2 6974 4735 5 637 297 0 0 0 chr13 6904582 6904615 -113379697 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 5 637 6406 156 20 6 chr13 6904615 6904645 -113379667 - Lx3C LINE L1 -1152 4734 4705 5 637 1112 72 0 0 chr13 6904645 6904783 -113379529 - B1_Mus1 SINE Alu -6 142 5 5 637 1412 245 18 42 chr13 6904811 6905194 -113379118 - Lx8 LINE L1 -351 7122 6749 5 637 417 39 0 0 chr13 6905801 6905852 -113378460 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 637 219 350 97 0 chr13 6905873 6905976 -113378336 + L2 LINE L2 2793 2905 -514 5 637 747 320 6 0 chr13 6906202 6906377 -113377935 - ID_B1 SINE B4 -48 176 1 5 637 721 323 38 15 chr13 6907987 6908248 -113376064 - RMER15 LTR ERVL 0 575 309 5 637 387 210 59 92 chr13 6908302 6908454 -113375858 - RMER15 LTR ERVL -427 148 2 5 637 7040 80 9 2 chr13 6908785 6910190 -113374122 - L1_Mus1 LINE L1 0 6567 5147 5 637 12453 154 73 49 chr13 6910185 6913308 -113371004 - L1_Mus1 LINE L1 -2433 3450 261 5 637 50 0 0 0 chr13 6913844 6913894 -113370418 + AT_rich Low_complexity Low_complexity 1 50 0 5 637 186 280 12 74 chr13 6913944 6914025 -113370287 - MIR SINE MIR -15 247 172 5 637 365 287 51 14 chr13 6914219 6914357 -113369955 - B1_Mur2 SINE Alu -5 144 2 5 637 530 289 98 16 chr13 6914481 6914674 -113369638 - B3 SINE B2 -7 209 1 5 637 4087 182 48 12 chr13 6915038 6915982 -113368330 - Lx3C LINE L1 -190 6786 5809 5 637 2480 147 15 13 chr13 6915983 6916453 -113367859 - L1_Mur1 LINE L1 -1287 4590 4120 5 637 7965 39 0 0 chr13 6916504 6917635 -113366677 - L1Md_F2 LINE L1 -10 6572 5442 5 637 5181 162 18 3 chr13 6917628 6918672 -113365640 - L1_Mur1 LINE L1 -1746 4140 3081 5 637 810 193 17 0 chr13 6918675 6918851 -113365461 - L1_Mur1 LINE L1 -5940 1044 866 5 637 267 186 0 0 chr13 6919233 6919276 -113365036 - ID_B1 SINE B4 -8 216 174 5 637 247 304 185 0 chr13 6919276 6919325 -113364987 - PB1D10 SINE Alu -8 109 1 5 637 344 314 12 0 chr13 6919325 6919373 -113364939 - ID SINE ID -143 81 33 5 637 297 290 279 25 chr13 6919979 6920216 -113364096 - RMER15 LTR ERVL 0 575 279 5 637 227 271 32 147 chr13 6920223 6920379 -113363933 - RMER15 LTR ERVL -419 156 19 5 637 205 314 148 55 chr13 6921795 6921923 -113362389 - MIRb SINE MIR -68 200 61 5 637 343 167 17 0 chr13 6922728 6922788 -113361524 - ID SINE ID -161 63 3 5 637 964 268 51 113 chr13 6922824 6923177 -113361135 + MTE2a LTR MaLR 7 337 -42 5 637 337 346 78 24 chr13 6923175 6923341 -113360971 - B4 SINE B4 -18 274 100 5 637 457 316 24 48 chr13 6923696 6923862 -113360450 + RSINE1 SINE B4 4 165 0 5 637 2236 178 2 86 chr13 6924925 6925125 -113359187 + MTC LTR MaLR 1 197 -224 5 637 4487 132 43 17 chr13 6925125 6925872 -113358440 + Lx4A LINE L1 6292 7057 -1 5 637 2236 178 2 86 chr13 6925872 6926126 -113358186 + MTC LTR MaLR 198 417 -4 5 637 45 55 0 0 chr13 6926369 6926442 -113357870 + AT_rich Low_complexity Low_complexity 1 73 0 5 637 740 236 0 70 chr13 6926442 6926629 -113357683 - B3A SINE B2 -1 197 24 5 637 352 281 92 26 chr13 6926759 6926957 -113357355 - L1M2 LINE L1 -780 5579 5367 6 637 455 273 37 43 chr13 6926974 6927135 -113357177 + L1MA5 LINE L1 5781 5940 -360 6 637 990 0 0 0 chr13 6927465 6927575 -113356737 + (TCTCCC)n Simple_repeat Simple_repeat 1 110 0 6 637 308 327 31 39 chr13 6928018 6928247 -113356065 - L1MD2 LINE L1 0 6359 6133 6 637 345 332 108 58 chr13 6928247 6928487 -113355825 - L1MD2 LINE L1 -199 6160 5909 6 637 512 303 138 0 chr13 6928525 6928720 -113355592 - ID_B1 SINE B4 -2 222 1 6 637 1949 99 79 7 chr13 6928836 6929140 -113355172 - Lx LINE L1 -16 6638 6313 6 637 378 352 73 37 chr13 6930189 6930407 -113353905 + B4A SINE B4 55 280 -12 6 637 504 32 0 0 chr13 6930700 6930762 -113353550 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 637 353 180 11 0 chr13 6931227 6931316 -113352996 + GA-rich Low_complexity Low_complexity 3 92 0 6 637 239 294 122 63 chr13 6931530 6931784 -113352528 + Lx8 LINE L1 7200 7468 -5 6 637 435 119 0 0 chr13 6931842 6931909 -113352403 + (TAGA)n Simple_repeat Simple_repeat 1 67 0 6 637 2000 220 137 6 chr13 6932102 6932568 -113351744 + RMER15 LTR ERVL 49 575 0 6 637 2119 96 6 88 chr13 6932910 6933264 -113351048 - ORR1A2 LTR MaLR 0 327 3 6 637 535 293 29 73 chr13 6934158 6934364 -113349948 - B3A SINE B2 0 198 2 6 637 391 130 0 25 chr13 6935648 6935727 -113348585 + CT-rich Low_complexity Low_complexity 3 79 0 6 637 19994 77 3 3 chr13 6936024 6939555 -113344757 - L1Md_F2 LINE L1 -13 6569 3037 6 637 4403 12 0 12 chr13 6939555 6940054 -113344258 + MT2_Mm LTR ERVL 1 493 0 6 637 33049 16 14 0 chr13 6940054 6945341 -113338971 + MERVL-int LTR ERVL 1 5360 -125 6 637 366 158 71 35 chr13 6945341 6945426 -113338886 + ORR1A3-int LTR MaLR 553 640 -1323 6 637 302 0 0 0 chr13 6945426 6945464 -113338848 + MERVL-int LTR ERVL 5448 5485 0 6 637 4403 12 0 12 chr13 6945464 6945963 -113338349 + MT2_Mm LTR ERVL 1 493 0 6 637 2128 97 0 0 chr13 6945963 6946274 -113338038 - L1Md_F2 LINE L1 -2842 3041 2731 6 637 732 62 0 0 chr13 6946290 6946386 -113337926 + L1_Mm LINE L1 4920 5015 -868 6 79 5629 92 33 7 chr13 6946382 6947997 -113336315 - L1Md_F2 LINE L1 -3833 2050 392 6 638 396 185 0 0 chr13 6948804 6948912 -113335400 + T-rich Low_complexity Low_complexity 1 108 0 6 638 979 78 0 0 chr13 6948913 6949041 -113335271 - B1_Mus1 SINE Alu -1 147 20 6 638 225 94 0 0 chr13 6949077 6949109 -113335203 + (CATA)n Simple_repeat Simple_repeat 2 33 0 6 638 2503 100 127 14 chr13 6949791 6950218 -113334094 + IAPLTR2_Mm LTR ERVK 1 475 0 6 638 697 240 0 0 chr13 6950875 6951000 -113333312 + B3A SINE B2 1 125 -73 6 638 285 29 0 0 chr13 6951003 6951037 -113333275 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 638 2887 52 6 0 chr13 6951123 6951487 -113332825 - L1_Mus3 LINE L1 -5 6633 6268 6 638 646 318 16 16 chr13 6952181 6952373 -113331939 + B4 SINE B4 1 192 -100 6 638 217 242 16 0 chr13 6952653 6952715 -113331597 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 6 638 1095 101 0 0 chr13 6953078 6953226 -113331086 + B1_Mus1 SINE Alu 1 148 0 6 638 231 36 0 0 chr13 6953255 6953283 -113331029 + (A)n Simple_repeat Simple_repeat 1 28 0 6 638 290 292 68 68 chr13 6953481 6953628 -113330684 - LTR79 LTR ERVL -3 524 378 6 638 578 296 94 10 chr13 6953813 6954014 -113330298 + B4A SINE B4 1 218 -74 6 638 234 0 0 0 chr13 6954109 6954135 -113330177 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 638 4788 66 3 2 chr13 6954258 6954880 -113329432 - L1_Mus1 LINE L1 0 6567 5945 6 638 3496 18 2 0 chr13 6955810 6956205 -113328107 - MTA_Mm LTR MaLR 0 396 1 6 638 8150 36 7 5 chr13 6956205 6957249 -113327063 - MTA_Mm-int LTR MaLR 0 1098 53 6 638 1121 0 0 0 chr13 6957208 6957336 -113326976 - MT2_Mm LTR ERVL -365 128 1 6 638 26 74 0 0 chr13 6957568 6957622 -113326690 + AT_rich Low_complexity Low_complexity 1 54 0 6 638 5274 240 51 24 chr13 6957630 6957730 -113326582 + Lx6 LINE L1 6061 6162 -1298 6 638 243 88 0 0 chr13 6957730 6957764 -113326548 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 638 5274 240 51 24 chr13 6957764 6958833 -113325479 + Lx6 LINE L1 6163 7263 -197 6 638 189 0 0 0 chr13 6958833 6958854 -113325458 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 6 638 5274 240 51 24 chr13 6958854 6959043 -113325269 + Lx6 LINE L1 7264 7454 -6 6 638 500 227 46 125 chr13 6959050 6959442 -113324870 - Lx7 LINE L1 -8 7688 7328 6 638 205 139 56 0 chr13 6959467 6959503 -113324809 + A-rich Low_complexity Low_complexity 4 41 0 6 638 3418 241 24 60 chr13 6959509 6960546 -113323766 - Lx7 LINE L1 -365 7331 6332 6 638 1759 148 3 12 chr13 6960541 6960870 -113323442 - L1_Mur3 LINE L1 -388 5492 5167 6 638 853 209 67 41 chr13 6961038 6961098 -113323214 - URR1A DNA MER1_type -26 200 140 6 638 1244 41 0 0 chr13 6961098 6961245 -113323067 + B1_Mm SINE Alu 1 147 0 6 638 853 209 67 41 chr13 6961245 6961379 -113322933 - URR1A DNA MER1_type -87 139 1 6 638 531 326 90 54 chr13 6961546 6961825 -113322487 - B4A SINE B4 -2 290 2 6 638 3082 98 21 38 chr13 6961893 6962370 -113321942 - MT2C_Mm LTR ERVL -6 469 1 6 638 25 75 0 0 chr13 6962625 6962678 -113321634 + AT_rich Low_complexity Low_complexity 1 53 0 6 638 7668 56 0 0 chr13 6962749 6963848 -113320464 - L1Md_F2 LINE L1 -19 6563 5465 6 638 397 331 107 40 chr13 6964042 6964294 -113320018 + Lx8 LINE L1 7058 7326 -147 6 638 289 377 45 7 chr13 6964839 6964994 -113319318 - L2a LINE L2 0 3426 3266 6 638 237 333 289 11 chr13 6965228 6965365 -113318947 - L2a LINE L2 -455 2964 2809 6 638 180 0 0 0 chr13 6965365 6965385 -113318927 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 6 638 237 333 289 11 chr13 6965385 6965620 -113318692 - L2a LINE L2 -611 2808 2488 6 638 641 306 43 64 chr13 6965795 6966029 -113318283 - MLT1A0 LTR MaLR -1 364 136 6 638 26 74 0 0 chr13 6966146 6966200 -113318112 + AT_rich Low_complexity Low_complexity 1 54 0 6 638 2197 236 18 62 chr13 6966237 6966838 -113317474 - RMER15 LTR ERVL 0 575 1 6 638 405 0 0 0 chr13 6966919 6966964 -113317348 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 638 2382 262 135 11 chr13 6967773 6968500 -113315812 + Lx5 LINE L1 363 1187 -6541 6 638 460 0 33 0 chr13 6968500 6968560 -113315752 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 638 4006 187 45 24 chr13 6968560 6969575 -113314737 + Lx5 LINE L1 1188 2234 -3646 6 638 326 83 0 0 chr13 6969564 6969612 -113314700 + L1_Mur3 LINE L1 4582 4629 -1251 6 638 1060 60 0 7 chr13 6970204 6970339 -113313973 + B1_Mm SINE Alu 1 134 -13 6 638 4146 162 54 1 chr13 6970396 6971152 -113313160 - RLTR25A LTR ERVK -307 796 1 6 638 7681 174 34 6 chr13 6971152 6973443 -113310869 + Lx5 LINE L1 4373 6741 -309 6 638 1846 217 62 28 chr13 6973442 6973673 -113310639 + Lx7 LINE L1 7124 7354 -342 6 638 342 0 0 0 chr13 6973673 6973711 -113310601 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 6 638 1846 217 62 28 chr13 6973711 6974025 -113310287 + Lx7 LINE L1 7355 7687 -9 6 638 256 308 21 42 chr13 6974092 6974187 -113310125 + B3A SINE B2 90 182 -16 6 638 498 282 61 16 chr13 6974457 6974702 -113309610 - MER97b DNA MER1_type? -196 857 602 6 638 402 304 188 19 chr13 6974752 6975071 -113309241 - MER97b DNA MER1_type? -406 647 275 6 638 1346 275 144 51 chr13 6975092 6975798 -113308514 + Lx8 LINE L1 6699 7470 -3 6 638 3503 86 40 98 chr13 6975985 6976590 -113307722 + Lx3_Mus LINE L1 6440 7009 0 6 638 380 332 116 10 chr13 6978118 6978410 -113305902 - MER82 DNA MER2_type -241 412 90 6 638 47 19 0 0 chr13 6979234 6979288 -113305024 + AT_rich Low_complexity Low_complexity 1 54 0 6 638 718 275 141 24 chr13 6979292 6979668 -113304644 + Lx8 LINE L1 6774 7193 -280 6 638 291 141 0 0 chr13 6979829 6979893 -113304419 + (T)n Simple_repeat Simple_repeat 1 64 0 6 638 648 289 0 0 chr13 6981108 6981257 -113303055 - B1F SINE Alu 0 149 1 6 638 226 209 42 56 chr13 6981195 6981266 -113303046 + YREP_Mm Unknown Unknown 255 324 -1488 6 638 1460 211 94 84 chr13 6981467 6981882 -113302430 + MTD LTR MaLR 1 419 0 6 638 285 253 41 53 chr13 6982112 6982283 -113302029 - L1MCa LINE L1 -5485 1023 855 6 638 259 96 0 76 chr13 6982648 6982727 -113301585 + A-rich Low_complexity Low_complexity 5 77 0 6 638 212 0 0 35 chr13 6982925 6982954 -113301358 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 6 638 384 309 87 27 chr13 6982982 6983285 -113301027 + L1MA7 LINE L1 5946 6266 -34 6 638 234 0 0 0 chr13 6984039 6984065 -113300247 + (A)n Simple_repeat Simple_repeat 1 26 0 6 638 459 35 0 0 chr13 6985283 6985340 -113298972 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 638 282 225 56 11 chr13 6986121 6986211 -113298101 + RMER17C-int LTR ERVK 1905 1998 -3524 6 638 1810 225 54 49 chr13 6986315 6986630 -113297682 + MYSERV6-int LTR ERVK 8114 8357 -602 6 638 288 0 0 0 chr13 6986630 6986662 -113297650 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 638 1810 213 49 51 chr13 6986662 6987009 -113297303 + MYSERV6-int LTR ERVK 8358 8700 -259 6 638 271 195 26 13 chr13 6987304 6987382 -113296930 + MYSERV6-int LTR ERVK 8704 8782 -177 6 638 590 188 38 63 chr13 6987472 6987631 -113296681 + RLTR19-int LTR ERVK 3509 3663 -2474 6 638 481 211 0 19 chr13 6987661 6987767 -113296545 - LSU-rRNA_Hsa rRNA rRNA -730 4305 4202 6 638 268 211 118 32 chr13 6987931 6988024 -113296288 + RMER17C-int LTR ERVK 2627 2727 -511 6 638 927 253 65 36 chr13 6988131 6988467 -113295845 + RMER17C-int LTR ERVK 2893 3238 0 6 638 201 250 0 56 chr13 6988589 6988661 -113295651 + CT-rich Low_complexity Low_complexity 3 70 0 6 638 259 155 27 40 chr13 6988946 6989020 -113295292 + (CAAA)n Simple_repeat Simple_repeat 2 74 0 6 638 236 343 158 20 chr13 6989055 6989156 -113295156 + RSINE1 SINE B4 51 165 0 6 638 564 286 157 118 chr13 6989679 6990043 -113294269 + MTE2a LTR MaLR 1 378 -1 6 638 739 262 140 12 chr13 6990046 6990289 -113294023 + B4A SINE B4 1 274 -18 6 638 328 224 19 9 chr13 6990349 6990457 -113293855 + GA-rich Low_complexity Low_complexity 1 109 0 6 638 447 78 0 0 chr13 6990550 6990614 -113293698 + (TG)n Simple_repeat Simple_repeat 1 64 0 6 638 602 270 35 63 chr13 6990616 6990901 -113293411 - B4A SINE B4 -14 278 2 6 638 211 194 0 0 chr13 6992726 6992762 -113291550 + CT-rich Low_complexity Low_complexity 1 36 0 6 638 365 244 11 23 chr13 6992785 6992873 -113291439 - PB1 SINE Alu -8 119 33 6 638 24 0 0 0 chr13 6992986 6993010 -113291302 + AT_rich Low_complexity Low_complexity 1 24 0 6 638 315 400 8 23 chr13 6993027 6993160 -113291152 - RSINE1 SINE B4 -2 163 33 6 638 342 0 0 0 chr13 6993964 6994002 -113290310 + (TC)n Simple_repeat Simple_repeat 2 39 0 6 638 445 71 14 14 chr13 6994002 6994072 -113290240 + (TA)n Simple_repeat Simple_repeat 2 72 0 6 638 778 291 22 18 chr13 6994489 6994788 -113289524 - MTE2b LTR MaLR -2 357 1 6 638 929 219 14 24 chr13 6994862 6995073 -113289239 - B3 SINE B2 -6 210 2 7 638 349 298 22 37 chr13 6995101 6995237 -113289075 + B1F SINE Alu 1 134 -15 7 638 221 211 123 0 chr13 6995327 6995384 -113288928 + MIR SINE MIR 163 226 -36 7 638 1206 48 7 0 chr13 6995780 6995925 -113288387 - B1_Mus2 SINE Alu 0 147 2 7 638 297 109 0 0 chr13 6996049 6996104 -113288208 + (T)n Simple_repeat Simple_repeat 1 55 0 7 638 21 0 0 0 chr13 6996908 6996929 -113287383 + AT_rich Low_complexity Low_complexity 1 21 0 7 638 591 294 102 15 chr13 6997297 6997563 -113286749 + B4A SINE B4 1 289 -3 7 638 1974 51 0 12 chr13 6998236 6998492 -113285820 + L1Md_T LINE L1 6330 6582 0 7 638 1615 72 17 8 chr13 6998756 6998993 -113285319 + Lx2B LINE L1 6759 6997 -3 7 638 1120 76 0 0 chr13 6999138 6999283 -113285029 - B1_Mus2 SINE Alu 0 147 3 7 638 284 245 53 11 chr13 6999284 6999379 -113284933 - L1MB2 LINE L1 -40 6131 6033 7 638 561 240 62 39 chr13 6999405 6999613 -113284699 - ID_B1 SINE B4 -8 216 4 7 638 292 283 47 8 chr13 6999861 6999989 -113284323 - L1MB2 LINE L1 -351 5832 5700 7 638 557 203 169 37 chr13 7000316 7000505 -113283807 + B3 SINE B2 1 214 -2 1 638 2694 126 47 5 chr13 7000535 7000983 -113283329 + Lx2 LINE L1 6530 6996 -1 2 638 24 53 0 0 chr13 7000983 7001021 -113283291 + AT_rich Low_complexity Low_complexity 1 38 0 3 638 290 302 9 0 chr13 7001041 7001147 -113283165 - L1M4c LINE L1 -1024 5358 5252 4 638 693 0 0 0 chr13 7001219 7001296 -113283016 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 5 638 1865 70 21 0 chr13 7001298 7001541 -113282771 - L1_Mus1 LINE L1 -2 6565 6318 6 638 2692 59 6 0 chr13 7001541 7001898 -113282414 + L1_Mm LINE L1 5279 5637 -246 7 638 340 318 8 0 chr13 7001900 7002026 -113282286 - L1M4c LINE L1 -1270 5106 4980 4 638 265 340 20 13 chr13 7002069 7002218 -113282094 - L1M4c LINE L1 -1499 4877 4728 4 638 290 290 62 19 chr13 7002224 7002435 -113281877 - L1M4c LINE L1 -4380 2004 1785 4 638 491 306 18 42 chr13 7002451 7002618 -113281694 - RSINE1 SINE B4 0 165 3 8 638 1376 140 52 38 chr13 7002991 7003280 -113281032 - RLTR15 LTR ERVK -66 293 1 9 638 1024 259 75 12 chr13 7003281 7003692 -113280620 - MYSERV-int LTR ERVK -2 6548 6112 9 638 504 282 117 100 chr13 7003715 7004009 -113280303 - L1M4c LINE L1 -4990 1394 1127 4 638 1250 34 0 0 chr13 7004009 7004155 -113280157 - B1_Mm SINE Alu 0 147 2 1 638 504 282 117 100 chr13 7004155 7004850 -113279462 - L1M4c LINE L1 -5258 1126 388 4 638 390 282 171 66 chr13 7004868 7005096 -113279216 - L1M4c LINE L1 -6105 279 28 4 638 654 322 10 0 chr13 7005346 7005554 -113278758 - B3 SINE B2 -6 210 1 1 638 651 161 0 0 chr13 7005600 7005718 -113278594 + (TA)n Simple_repeat Simple_repeat 1 118 0 1 638 465 202 0 0 chr13 7006020 7006119 -113278193 - Lx4B LINE L1 -1045 6013 5915 1 638 300 115 0 0 chr13 7006120 7006172 -113278140 + Lx2 LINE L1 6944 6995 -2 1 638 2436 187 20 10 chr13 7006184 7006680 -113277632 + Lx2B LINE L1 6477 6977 -23 1 638 22 56 0 0 chr13 7006683 7006719 -113277593 + AT_rich Low_complexity Low_complexity 1 36 0 1 638 351 0 0 0 chr13 7006979 7007018 -113277294 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 638 1681 242 106 34 chr13 7007187 7007268 -113277044 - Lx6 LINE L1 -233 7227 7150 1 638 3080 88 0 0 chr13 7007268 7007675 -113276637 + L1_Mus1 LINE L1 6161 6567 0 1 638 1681 242 106 34 chr13 7007675 7008101 -113276211 - Lx6 LINE L1 -311 7149 6683 1 638 33135 85 8 7 chr13 7008099 7014248 -113270064 - L1Md_F2 LINE L1 -12 6570 411 2 638 2196 239 56 41 chr13 7014248 7014855 -113269457 - Lx6 LINE L1 -761 6699 6084 1 638 15165 145 26 12 chr13 7014928 7018461 -113265851 - L1VL1 LINE L1 -1890 3993 407 2 638 1121 201 95 9 chr13 7018476 7018792 -113265520 - L1_Mur2 LINE L1 -5742 970 628 2 638 406 306 25 8 chr13 7018910 7019032 -113265280 - B3A SINE B2 -73 125 2 2 638 30 0 0 0 chr13 7019056 7019086 -113265226 + AT_rich Low_complexity Low_complexity 1 30 0 2 638 921 275 131 0 chr13 7019631 7019966 -113264346 + MTEa LTR MaLR 1 379 0 2 638 24 67 0 0 chr13 7022282 7022327 -113261985 + AT_rich Low_complexity Low_complexity 1 45 0 2 638 569 316 21 3 chr13 7022510 7022809 -113261503 - L1MA4 LINE L1 -372 5928 5589 2 638 363 78 0 0 chr13 7023090 7023141 -113261171 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 638 29 0 0 0 chr13 7023644 7023673 -113260639 + AT_rich Low_complexity Low_complexity 1 29 0 2 638 369 0 0 0 chr13 7023718 7023759 -113260553 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 638 274 184 0 0 chr13 7023760 7023809 -113260503 + (TATG)n Simple_repeat Simple_repeat 2 50 0 3 638 654 208 0 0 chr13 7023815 7024044 -113260268 + (TG)n Simple_repeat Simple_repeat 1 229 0 3 638 555 16 0 0 chr13 7024120 7024184 -113260128 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 638 476 345 28 56 chr13 7024191 7024369 -113259943 - B4A SINE B4 -117 175 3 3 638 195 42 0 0 chr13 7025606 7025630 -113258682 + (TTG)n Simple_repeat Simple_repeat 1 24 0 3 638 3281 134 25 2 chr13 7025640 7026156 -113258156 - Lx2 LINE L1 0 6997 6470 3 638 8535 71 6 11 chr13 7026161 7027864 -113256448 - L1VL4 LINE L1 -1448 2111 421 3 638 3120 263 96 27 chr13 7029287 7030277 -113254035 + Lx6 LINE L1 6371 7428 -32 3 638 883 281 28 74 chr13 7031072 7031506 -113252806 - Lx8 LINE L1 -315 7158 6745 3 638 6543 174 22 31 chr13 7032153 7033963 -113250349 + Lx5 LINE L1 919 2713 -3164 4 638 10917 164 56 10 chr13 7033962 7037002 -113247310 + Lx5 LINE L1 3669 6850 -200 4 638 3997 100 152 109 chr13 7037002 7037853 -113246459 + RMER17D LTR ERVK 1 887 -2 4 638 6528 194 62 16 chr13 7037853 7038025 -113246287 + Lx5 LINE L1 6851 7048 -2 4 638 2059 206 67 37 chr13 7038579 7038667 -113245645 - RLTR20A LTR ERVK -6 535 450 4 638 912 116 0 0 chr13 7038667 7038839 -113245473 + (CA)n Simple_repeat Simple_repeat 2 173 0 4 638 2059 206 67 37 chr13 7038839 7039269 -113245043 - RLTR20A LTR ERVK -92 449 2 4 638 241 276 17 33 chr13 7039274 7039308 -113245004 + RSINE1 SINE B4 104 136 -29 4 638 408 40 0 0 chr13 7039308 7039358 -113244954 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 4 638 241 276 17 33 chr13 7039358 7039383 -113244929 + RSINE1 SINE B4 137 162 -3 4 638 290 253 79 13 chr13 7039539 7039615 -113244697 - B4A SINE B4 -6 286 206 4 638 29098 97 3 6 chr13 7040077 7043181 -113241131 - L1_Mus1 LINE L1 -1 6566 3466 4 638 4237 25 2 0 chr13 7043181 7043662 -113240650 - LTRIS_Mm LTR ERV1 0 482 1 4 638 29098 130 29 6 chr13 7043662 7046843 -113237469 - L1_Mus1 LINE L1 -2418 3465 216 4 638 192 158 0 0 chr13 7047115 7047153 -113237159 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 638 786 22 0 0 chr13 7047155 7047247 -113237065 + (GA)n Simple_repeat Simple_repeat 1 92 0 5 638 354 325 51 8 chr13 7047248 7047366 -113236946 - RSINE1 SINE B4 -34 131 9 5 638 529 244 116 22 chr13 7047460 7047598 -113236714 - B4A SINE B4 -6 286 136 5 638 488 136 11 0 chr13 7047776 7047864 -113236448 + (TA)n Simple_repeat Simple_repeat 1 89 0 5 638 309 262 147 23 chr13 7048438 7048567 -113235745 - B1F2 SINE Alu -2 147 3 5 638 33725 63 3 3 chr13 7048583 7052585 -113231727 - L1Md_F2 LINE L1 -5 6577 2570 5 638 2167 98 126 6 chr13 7052585 7052933 -113231379 - RLTR10 LTR ERVK 0 390 1 5 638 33725 82 3 37 chr13 7052933 7055128 -113229184 - L1Md_F2 LINE L1 -3314 2569 456 5 638 273 119 0 0 chr13 7055263 7055305 -113229007 + (CCTA)n Simple_repeat Simple_repeat 3 44 0 5 638 425 229 118 9 chr13 7055368 7055478 -113228834 - ID_B1 SINE B4 -7 217 96 5 638 5208 46 1 5 chr13 7055499 7056150 -113228162 - L1Md_F2 LINE L1 -1 6581 5933 5 638 378 0 0 0 chr13 7057450 7057492 -113226820 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 638 745 316 67 79 chr13 7057493 7057874 -113226438 - MLT2B4 LTR ERVL -80 440 1 6 638 333 68 0 0 chr13 7057980 7058024 -113226288 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 638 228 229 33 0 chr13 7058038 7058099 -113226213 + (TA)n Simple_repeat Simple_repeat 1 63 0 6 638 201 241 54 36 chr13 7058862 7058918 -113225394 + MIRm SINE MIR 74 130 -146 6 638 675 57 0 0 chr13 7059312 7059400 -113224912 + (TC)n Simple_repeat Simple_repeat 1 88 0 6 638 3996 136 1 42 chr13 7059403 7060078 -113224234 - Lx3A LINE L1 -10 6971 6324 6 638 822 202 55 22 chr13 7060526 7060708 -113223604 - B2_Mm2 SINE B2 -7 188 1 6 638 369 236 7 13 chr13 7061061 7061211 -113223101 + (TA)n Simple_repeat Simple_repeat 2 150 0 6 638 487 312 155 11 chr13 7061232 7061440 -113222872 - B4 SINE B4 -55 237 2 6 638 193 385 83 20 chr13 7061574 7061826 -113222486 + L2a LINE L2 2993 3260 -166 7 638 575 303 21 59 chr13 7062526 7062712 -113221600 - B3A SINE B2 -6 192 14 7 638 185 65 32 0 chr13 7063789 7063820 -113220492 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7 638 196 30 0 57 chr13 7064630 7064665 -113219647 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 7 638 378 0 0 0 chr13 7064846 7064888 -113219424 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 638 711 264 33 69 chr13 7065117 7065297 -113219015 - ID_B1 SINE B4 0 224 54 7 638 181 361 30 40 chr13 7065654 7065755 -113218557 + L2b LINE L2 3276 3375 0 7 638 667 292 19 31 chr13 7066067 7066277 -113218035 - B3A SINE B2 -1 215 14 7 638 1844 39 0 0 chr13 7066991 7067224 -113217088 - L1Md_T LINE L1 -260 6322 6090 7 638 1311 49 0 0 chr13 7067224 7067387 -113216925 + L1Md_T LINE L1 6416 6578 -4 7 638 37 0 0 0 chr13 7067387 7067424 -113216888 + AT_rich Low_complexity Low_complexity 1 37 0 7 638 3657 18 123 0 chr13 7067661 7068100 -113216212 - MT2_Mm LTR ERVL 0 493 1 8 638 302 0 0 0 chr13 7068100 7068138 -113216174 - MERVL-int LTR ERVL 0 5485 5448 8 638 373 179 46 35 chr13 7068138 7068225 -113216087 - ORR1A3-int LTR MaLR -1323 640 553 8 638 45365 14 7 0 chr13 7068225 7073550 -113210762 - MERVL-int LTR ERVL -125 5360 1 8 638 4384 16 2 0 chr13 7073550 7074042 -113210270 - MT2_Mm LTR ERVL 0 493 1 8 638 801 283 34 68 chr13 7074047 7074343 -113209969 + ORR1D2 LTR MaLR 85 370 0 8 638 280 220 54 27 chr13 7074867 7074979 -113209333 - Lx8 LINE L1 -2 7471 7357 8 638 867 259 34 21 chr13 7075078 7075311 -113209001 + Lx8 LINE L1 6564 6799 -674 8 638 2139 96 30 60 chr13 7075333 7075667 -113208645 - ORR1A2 LTR MaLR -3 324 1 8 638 651 226 122 47 chr13 7075827 7076082 -113208230 - Lx8 LINE L1 -8 7465 7192 8 638 231 219 158 0 chr13 7076493 7076575 -113207737 + RMER5 LTR ERV1 33 127 -407 8 638 206 32 32 0 chr13 7076589 7076620 -113207692 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 638 480 256 91 23 chr13 7076626 7076802 -113207510 + RMER5 LTR ERV1 191 378 -156 8 638 418 204 82 18 chr13 7076837 7076947 -113207365 - RMER5 LTR ERV1 -385 149 33 8 638 500 256 8 0 chr13 7077020 7077145 -113207167 + RMER5 LTR ERV1 399 524 -10 8 639 366 23 0 0 chr13 7077910 7077953 -113206359 + (GA)n Simple_repeat Simple_repeat 2 44 0 9 639 209 204 0 0 chr13 7078090 7078139 -113206173 + T-rich Low_complexity Low_complexity 1 49 0 9 639 21 0 0 0 chr13 7078300 7078321 -113205991 + AT_rich Low_complexity Low_complexity 1 21 0 9 639 724 48 0 0 chr13 7078458 7078562 -113205750 - L1Md_T LINE L1 -1 6581 6478 9 639 277 29 0 0 chr13 7078562 7078597 -113205715 + L1Md_F3 LINE L1 6407 6441 -143 9 639 708 234 20 69 chr13 7079625 7079827 -113204485 + B3A SINE B2 7 198 0 9 639 2632 183 13 26 chr13 7079920 7080452 -113203860 - RLTR11A2 LTR ERVK -2 525 1 9 639 1843 187 12 82 chr13 7080746 7081132 -113203180 - ORR1B1 LTR MaLR -1 393 2 9 639 192 217 174 61 chr13 7082310 7082408 -113201904 - L3 LINE CR1 -3678 811 703 9 639 2885 47 0 85 chr13 7082589 7082988 -113201324 - RLTR10B2 LTR ERVK 0 365 1 9 639 351 0 0 0 chr13 7083195 7083234 -113201078 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 639 476 215 99 8 chr13 7083254 7083385 -113200927 - RMER1C Other Other 0 1342 1200 1 639 334 175 0 24 chr13 7083385 7083467 -113200845 + GA-rich Low_complexity Low_complexity 1 80 0 1 639 2797 263 34 59 chr13 7083469 7083494 -113200818 - RMER1C Other Other -118 1224 1192 1 639 726 12 0 0 chr13 7083494 7083577 -113200735 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 1 639 2797 263 34 59 chr13 7083577 7084422 -113199890 - RMER1C Other Other -151 1191 376 1 639 5182 105 35 8 chr13 7084564 7085646 -113198666 - Lx LINE L1 -410 6244 5123 1 639 3051 133 61 11 chr13 7085647 7086173 -113198139 + Lx3A LINE L1 6429 6980 -1 1 639 21 0 0 0 chr13 7086173 7086194 -113198118 + AT_rich Low_complexity Low_complexity 1 21 0 1 639 208 98 24 24 chr13 7086947 7086989 -113197323 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 1 639 1525 38 5 21 chr13 7088791 7088980 -113195332 - B2_Mm1t SINE B2 -7 186 1 1 639 255 125 0 0 chr13 7089014 7089054 -113195258 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 639 466 295 101 0 chr13 7089077 7089216 -113195096 - RSINE1 SINE B4 -10 155 3 1 639 297 75 0 0 chr13 7089836 7089876 -113194436 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1 639 249 222 0 0 chr13 7089916 7090015 -113194297 + CT-rich Low_complexity Low_complexity 2 100 0 1 639 1949 186 60 25 chr13 7090439 7090837 -113193475 - MTD LTR MaLR 0 419 8 1 639 204 273 190 3 chr13 7091160 7091294 -113193018 - MIR SINE MIR -75 193 33 1 639 407 349 61 81 chr13 7091618 7091977 -113192335 - ORR1E LTR MaLR -7 352 1 1 639 284 236 11 63 chr13 7092246 7092341 -113191971 + GA-rich Low_complexity Low_complexity 4 93 0 1 639 288 0 0 0 chr13 7093110 7093142 -113191170 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 639 223 330 11 11 chr13 7093950 7094045 -113190267 + CT-rich Low_complexity Low_complexity 3 97 0 1 639 713 276 213 6 chr13 7094279 7094593 -113189719 - MTEa LTR MaLR 0 379 1 1 639 226 333 111 63 chr13 7094712 7094965 -113189347 + ORR1E LTR MaLR 76 340 -19 1 639 210 143 0 0 chr13 7095185 7095220 -113189092 + (GAAA)n Simple_repeat Simple_repeat 3 37 0 1 639 432 326 13 59 chr13 7095328 7095481 -113188831 + B4A SINE B4 43 188 -104 1 639 258 32 0 0 chr13 7095505 7095536 -113188776 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 639 1020 31 0 0 chr13 7096089 7096217 -113188095 + (TG)n Simple_repeat Simple_repeat 2 129 0 1 639 359 337 0 0 chr13 7096758 7096853 -113187459 - RSINE1 SINE B4 -17 148 54 1 639 234 279 14 14 chr13 7097086 7097155 -113187157 + ID4_ SINE ID 2 70 -13 1 639 400 231 22 0 chr13 7097156 7097247 -113187065 + ID_B1 SINE B4 131 223 -1 1 639 636 267 123 57 chr13 7098205 7098559 -113185753 + MTE2b LTR MaLR 3 379 0 1 639 262 292 122 11 chr13 7098734 7098824 -113185488 - ID_B1 SINE B4 -21 203 104 1 639 235 315 157 0 chr13 7098745 7098834 -113185478 - B1F SINE Alu -34 115 13 1 639 184 280 40 0 chr13 7099930 7099980 -113184332 + L3 LINE CR1 3159 3210 -1279 1 639 254 278 66 85 chr13 7101186 7101292 -113183020 - MER5B DNA MER1_type -71 107 4 1 639 258 267 23 15 chr13 7101857 7101990 -113182322 - Lx9 LINE L1 -47 7597 7464 1 639 950 309 61 16 chr13 7102011 7102436 -113181876 - Lx9 LINE L1 -129 7515 7072 1 639 625 324 80 7 chr13 7102646 7102909 -113181403 + ORR1E LTR MaLR 72 376 -3 1 639 198 0 0 0 chr13 7103957 7103979 -113180333 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 1 639 2247 109 12 0 chr13 7104229 7104551 -113179761 - ORR1A2 LTR MaLR -1 326 1 1 639 207 75 35 86 chr13 7104629 7104687 -113179625 + (TTTAA)n Simple_repeat Simple_repeat 3 57 0 1 639 297 284 25 0 chr13 7105183 7105264 -113179048 + MTEa LTR MaLR 64 146 -233 1 639 550 331 6 25 chr13 7105782 7105943 -113178369 - RSINE1 SINE B4 0 165 8 1 639 639 276 46 51 chr13 7106526 7106721 -113177591 - B3 SINE B2 -22 194 1 1 639 254 229 44 103 chr13 7106775 7106911 -113177401 - Lx9 LINE L1 0 7644 7517 1 639 875 25 0 16 chr13 7108659 7108780 -113175532 - L1Md_F2 LINE L1 -1 6581 6463 1 639 561 42 0 0 chr13 7109646 7109718 -113174594 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 639 207 0 0 0 chr13 7109728 7109751 -113174561 + (TC)n Simple_repeat Simple_repeat 2 24 0 1 639 252 77 0 0 chr13 7109754 7109793 -113174519 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 1 639 1968 58 39 14 chr13 7110853 7111132 -113173180 - L1_Mus2 LINE L1 0 6566 6281 1 639 352 286 27 27 chr13 7111881 7111902 -113172410 - L1MB5 LINE L1 -247 5927 5909 1 639 3749 142 24 5 chr13 7111902 7112516 -113171796 - Lx2B LINE L1 -3 6997 6372 1 639 1075 99 12 0 chr13 7112516 7112678 -113171634 - Lx2B LINE L1 -1125 5875 5712 1 639 1897 149 0 16 chr13 7112676 7112997 -113171315 + Lx2B LINE L1 5415 5730 -153 1 639 360 0 0 0 chr13 7113286 7113326 -113170986 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 639 552 30 0 0 chr13 7113326 7113391 -113170921 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 639 188 323 93 10 chr13 7113440 7113537 -113170775 - MIR SINE MIR -98 164 60 1 639 3872 162 36 18 chr13 7113779 7114521 -113169791 - RMER6A LTR ERVK 0 756 1 1 639 236 167 18 18 chr13 7114826 7114881 -113169431 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1 639 277 333 65 32 chr13 7115029 7115114 -113169198 + B3A SINE B2 70 162 -36 1 639 333 0 0 0 chr13 7115114 7115151 -113169161 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 639 277 333 65 32 chr13 7115151 7115189 -113169123 + B3A SINE B2 163 197 -1 1 639 339 279 124 34 chr13 7117187 7117278 -113167034 + Lx8 LINE L1 7277 7382 -91 1 639 396 0 0 0 chr13 7117278 7117322 -113166990 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 639 339 279 124 34 chr13 7117322 7117408 -113166904 + Lx8 LINE L1 7383 7470 -3 1 639 26 0 0 0 chr13 7117439 7117465 -113166847 + AT_rich Low_complexity Low_complexity 1 26 0 1 639 4480 81 8 3 chr13 7117639 7118283 -113166029 - L1_Mm LINE L1 -67 5816 5170 1 639 1235 60 0 6 chr13 7118283 7118450 -113165862 + L1_Mus2 LINE L1 6401 6566 0 1 639 513 95 0 13 chr13 7118864 7118939 -113165373 + URR1B DNA MER1_type 152 225 0 1 639 543 277 0 30 chr13 7118989 7119123 -113165189 - URR1A DNA MER1_type -96 130 1 1 639 1096 36 0 7 chr13 7120737 7120877 -113163435 - B1_Mus1 SINE Alu 0 148 10 1 639 416 60 45 0 chr13 7120877 7120944 -113163368 + L1Md_F2 LINE L1 6513 6582 0 1 639 767 306 89 31 chr13 7120967 7121325 -113162987 - MTE2b LTR MaLR 0 379 1 1 639 7314 157 54 94 chr13 7121489 7121801 -113162511 - RLTR21 LTR ERVK -2 1570 1301 1 639 339 25 0 0 chr13 7121801 7121841 -113162471 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 639 7314 157 54 94 chr13 7121841 7122485 -113161827 - RLTR21 LTR ERVK -272 1300 679 1 639 1133 90 0 0 chr13 7122485 7122629 -113161683 + B1_Mus1 SINE Alu 1 144 -4 1 639 7314 157 54 94 chr13 7122629 7123306 -113161006 - RLTR21 LTR ERVK -894 678 1 1 639 36232 30 0 0 chr13 7123531 7130136 -113154176 - L1Md_T LINE L1 0 6585 1 1 639 920 118 5 33 chr13 7130300 7130484 -113153828 + CT-rich Low_complexity Low_complexity 2 180 0 1 639 1514 129 167 7 chr13 7130530 7130811 -113153501 + ORR1A3 LTR MaLR 1 326 0 1 639 283 287 143 38 chr13 7130865 7130970 -113153342 - B4 SINE B4 -173 119 4 1 639 216 182 0 0 chr13 7131860 7131904 -113152408 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 639 297 51 0 0 chr13 7134386 7134425 -113149887 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 639 517 313 45 45 chr13 7134755 7135066 -113149246 - L1MC3 LINE L1 -830 6955 6645 1 639 447 107 0 0 chr13 7135078 7135153 -113149159 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 639 189 0 0 0 chr13 7135153 7135174 -113149138 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 639 289 246 105 35 chr13 7135343 7135486 -113148826 + L1MA8 LINE L1 6133 6285 -6 1 639 262 167 67 29 chr13 7135946 7136051 -113148261 + (TAGA)n Simple_repeat Simple_repeat 3 111 0 1 639 198 0 0 0 chr13 7136468 7136490 -113147822 + (TC)n Simple_repeat Simple_repeat 1 22 0 1 639 2364 60 0 0 chr13 7136503 7136801 -113147511 - L1_Mus1 LINE L1 0 6567 6270 1 639 3318 224 13 76 chr13 7137381 7138648 -113145664 - RMER1B Other Other -3 1063 7 1 639 719 318 98 25 chr13 7138945 7139190 -113145122 + B4A SINE B4 1 263 -29 1 639 450 53 0 0 chr13 7139757 7139814 -113144498 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 639 572 282 94 17 chr13 7140111 7140291 -113144021 - ID_B1 SINE B4 -29 195 2 1 639 1542 38 11 0 chr13 7140296 7140482 -113143830 - B2_Mm1t SINE B2 -5 188 1 1 639 379 333 73 7 chr13 7141030 7141181 -113143131 - RSINE1 SINE B4 0 165 5 1 639 1195 62 0 0 chr13 7142047 7142193 -113142119 + B1_Mus2 SINE Alu 2 147 0 1 639 222 37 0 0 chr13 7142193 7142220 -113142092 + (A)n Simple_repeat Simple_repeat 1 27 0 1 639 785 312 10 36 chr13 7142540 7142789 -113141523 - ID_B1 SINE B4 -41 251 1 1 639 546 251 87 44 chr13 7143107 7143290 -113141022 - B2_Mm2 SINE B2 -4 191 1 1 639 22 35 0 0 chr13 7143295 7143324 -113140988 + AT_rich Low_complexity Low_complexity 1 29 0 1 639 470 241 26 9 chr13 7143444 7143557 -113140755 + URR1A DNA MER1_type 76 190 -36 1 639 6011 86 42 1 chr13 7143557 7144455 -113139857 - Lx3_Mus LINE L1 -141 5745 4811 1 639 7393 113 48 9 chr13 7144455 7144691 -113139621 + Lx3_Mus LINE L1 5763 6001 -1008 1 639 4617 131 70 76 chr13 7144691 7145117 -113139195 + RMER17A2 LTR ERVK 1 445 -461 1 639 1220 86 6 0 chr13 7145117 7145292 -113139020 + (TC)n Simple_repeat Simple_repeat 1 176 0 1 639 4617 131 70 76 chr13 7145292 7145776 -113138536 + RMER17A2 LTR ERVK 446 905 -1 1 639 7393 113 48 9 chr13 7145776 7146738 -113137574 + Lx3_Mus LINE L1 6002 7008 -1 1 639 31 58 0 0 chr13 7146834 7146886 -113137426 + AT_rich Low_complexity Low_complexity 1 52 0 1 639 431 123 0 15 chr13 7146886 7146952 -113137360 + URR1A DNA MER1_type 159 223 -3 1 639 454 30 45 0 chr13 7147183 7147250 -113137062 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 1 639 575 167 10 10 chr13 7147250 7147353 -113136959 - B1_Mus2 SINE Alu -44 103 1 2 639 188 0 0 69 chr13 7147706 7147735 -113136577 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 639 1670 165 16 3 chr13 7148008 7148312 -113136000 - Lx LINE L1 0 6654 6347 2 639 213 39 0 0 chr13 7148314 7148340 -113135972 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 2 639 583 338 6 0 chr13 7148375 7148535 -113135777 - B4A SINE B4 -74 218 58 2 639 242 295 17 87 chr13 7149611 7149726 -113134586 - MER94 DNA AcHobo -5 129 23 2 639 372 273 64 128 chr13 7150703 7150875 -113133437 + MTEa LTR MaLR 216 376 -3 2 639 290 342 8 0 chr13 7151624 7151741 -113132571 + (TGGA)n Simple_repeat Simple_repeat 2 119 0 2 639 389 37 37 0 chr13 7151793 7151847 -113132465 + (TATG)n Simple_repeat Simple_repeat 2 57 0 2 639 334 308 17 0 chr13 7153383 7153503 -113130809 - Lx8 LINE L1 -699 6774 6653 2 639 492 18 0 0 chr13 7153711 7153768 -113130544 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 639 408 291 55 34 chr13 7154419 7154565 -113129747 + B1F SINE Alu 1 149 0 2 639 725 228 47 11 chr13 7155008 7155199 -113129113 + Lx5 LINE L1 6848 7045 -5 2 639 207 0 0 0 chr13 7155850 7155873 -113128439 + (T)n Simple_repeat Simple_repeat 1 23 0 2 639 31 0 0 0 chr13 7156291 7156322 -113127990 + AT_rich Low_complexity Low_complexity 1 31 0 2 639 582 41 0 0 chr13 7156323 7156396 -113127916 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 2 639 217 65 20 61 chr13 7156785 7156834 -113127478 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 639 1007 54 0 0 chr13 7156841 7156971 -113127341 - B1_Mm SINE Alu 0 147 18 2 639 421 163 0 113 chr13 7156886 7156983 -113127329 - MT2B LTR ERVL -344 257 172 2 639 581 301 40 25 chr13 7157463 7157673 -113126639 + B3A SINE B2 1 215 -1 2 639 297 89 0 0 chr13 7158423 7158468 -113125844 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 639 2082 102 245 2 chr13 7160298 7160800 -113123512 + Lx LINE L1 6025 6648 -6 2 639 201 74 0 0 chr13 7161021 7161048 -113123264 + (A)n Simple_repeat Simple_repeat 1 27 0 2 639 322 308 0 36 chr13 7161226 7161337 -113122975 + MLT1H LTR MaLR 96 202 -347 2 639 646 249 58 48 chr13 7162340 7162547 -113121765 - B3 SINE B2 -6 210 2 2 639 330 67 0 0 chr13 7162885 7162930 -113121382 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 639 243 0 0 0 chr13 7164156 7164183 -113120129 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 639 614 287 28 7 chr13 7164184 7164328 -113119984 - ID_B1 SINE B4 -7 217 71 2 639 222 128 0 0 chr13 7164436 7164475 -113119837 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 2 639 207 93 67 44 chr13 7165405 7165450 -113118862 + T-rich Low_complexity Low_complexity 3 48 0 2 639 1111 69 21 0 chr13 7165456 7165600 -113118712 - B1_Mus2 SINE Alu 0 147 1 2 639 248 261 145 82 chr13 7165737 7165973 -113118339 + MTEb LTR MaLR 8 273 -106 2 639 502 250 9 28 chr13 7166319 7166426 -113117886 - PB1D10 SINE Alu 0 117 13 2 639 202 149 14 29 chr13 7167214 7167283 -113117029 + A-rich Low_complexity Low_complexity 2 69 0 2 639 347 183 146 0 chr13 7167990 7168072 -113116240 + HAL1-3A_ME LINE L1 1934 2027 -831 2 639 219 170 0 0 chr13 7168072 7168119 -113116193 + (TA)n Simple_repeat Simple_repeat 1 47 0 2 639 260 111 22 0 chr13 7168118 7168163 -113116149 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 639 643 165 9 0 chr13 7168321 7168430 -113115882 + URR1A DNA MER1_type 76 185 -41 2 639 26 0 0 0 chr13 7168445 7168471 -113115841 + AT_rich Low_complexity Low_complexity 1 26 0 2 639 2676 117 0 47 chr13 7168506 7168935 -113115377 - RLTR9E LTR ERVK 0 409 1 2 639 348 173 0 0 chr13 7168936 7169011 -113115301 - ETnERV2-int LTR ERVK -1 7405 7331 2 639 21587 168 66 58 chr13 7169215 7174539 -113109773 - ETnERV2-int LTR ERVK -970 6436 1071 2 639 658 264 97 33 chr13 7174549 7174909 -113109403 - ETnERV2-int LTR ERVK -2927 387 5 2 639 2572 118 2 56 chr13 7174912 7175344 -113108968 - RLTR9E LTR ERVK 0 409 1 2 639 22 0 0 0 chr13 7175833 7175855 -113108457 + AT_rich Low_complexity Low_complexity 1 22 0 2 639 378 0 0 0 chr13 7175998 7176040 -113108272 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 639 392 250 266 0 chr13 7176056 7176180 -113108132 - RSINE1 SINE B4 -3 162 6 2 639 3056 63 25 12 chr13 7176396 7176798 -113107514 - MTB_Mm LTR MaLR 0 407 1 2 639 230 233 0 91 chr13 7177396 7177422 -113106890 - RMER19B LTR ERVK -2 900 880 2 639 1191 121 9 37 chr13 7177422 7177636 -113106676 - Lx LINE L1 -2 6652 6445 2 639 230 233 0 91 chr13 7177636 7177675 -113106637 - RMER19B LTR ERVK -23 879 841 2 639 1418 234 47 73 chr13 7177674 7177938 -113106374 - RMER19B LTR ERVK -241 661 247 2 639 3664 57 40 6 chr13 7177938 7178414 -113105898 + L1Md_F2 LINE L1 6079 6570 -12 2 639 1418 225 45 73 chr13 7178414 7178576 -113105736 - RMER19B LTR ERVK -445 457 313 2 639 310 148 0 137 chr13 7178640 7178742 -113105570 + Lx4A LINE L1 6961 7048 -10 2 639 24 0 0 0 chr13 7178742 7178766 -113105546 + AT_rich Low_complexity Low_complexity 1 24 0 2 639 543 31 0 0 chr13 7179225 7179290 -113105022 + (TTTTC)n Simple_repeat Simple_repeat 1 65 0 2 639 480 284 68 0 chr13 7179344 7179506 -113104806 + RMER15 LTR ERVL 403 575 0 2 639 333 80 44 22 chr13 7180632 7180722 -113103590 + (CAAA)n Simple_repeat Simple_repeat 2 93 0 2 639 484 351 50 89 chr13 7180727 7181030 -113103282 + B4A SINE B4 2 292 0 2 639 300 53 0 0 chr13 7181080 7181118 -113103194 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 639 231 88 0 0 chr13 7181971 7182005 -113102307 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 639 288 53 0 0 chr13 7182558 7182596 -113101716 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 639 236 270 34 51 chr13 7183396 7183513 -113100799 + Lx6 LINE L1 6477 6591 -869 2 639 3914 224 71 20 chr13 7183587 7184609 -113099703 - Lx7 LINE L1 -493 7203 6129 2 639 222 357 0 0 chr13 7185490 7185546 -113098766 - RSINE1 SINE B4 -107 58 3 2 639 3189 209 41 19 chr13 7186433 7187207 -113097105 - Lx9 LINE L1 -7 7637 6847 2 639 226 224 0 0 chr13 7187734 7187783 -113096529 + GA-rich Low_complexity Low_complexity 2 50 0 2 639 1297 163 12 8 chr13 7187827 7188080 -113096232 - BGLII_A LTR ERVK 0 445 192 2 639 348 259 0 0 chr13 7188077 7188158 -113096154 - RLTR17 LTR ERVK -611 81 1 2 639 326 304 0 0 chr13 7188416 7188495 -113095817 + ID_B1 SINE B4 141 219 -5 2 639 219 233 0 0 chr13 7188543 7188586 -113095726 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 639 236 130 22 0 chr13 7192238 7192284 -113092028 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2 639 329 336 117 0 chr13 7193070 7193198 -113091114 + RSINE1 SINE B4 2 144 -21 2 639 1897 60 0 4 chr13 7193469 7193720 -113090592 + L1Md_F2 LINE L1 5337 5586 -297 2 639 7535 74 10 1 chr13 7193720 7194706 -113089606 + L1Md_F2 LINE L1 5587 6581 -1 2 639 580 258 42 68 chr13 7194868 7195059 -113089253 - B3A SINE B2 -10 188 3 2 639 573 15 0 0 chr13 7195613 7195679 -113088633 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 639 204 40 0 0 chr13 7195679 7195704 -113088608 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 639 300 336 34 40 chr13 7195844 7195993 -113088319 - B4A SINE B4 0 292 145 2 639 22 35 0 0 chr13 7196286 7196315 -113087997 + AT_rich Low_complexity Low_complexity 1 29 0 2 639 378 42 0 0 chr13 7197089 7197137 -113087175 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 639 519 17 0 0 chr13 7197141 7197201 -113087111 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 639 328 145 14 55 chr13 7198035 7198108 -113086204 - HAL1-3A_ME LINE L1 -813 2045 1976 2 639 360 237 0 0 chr13 7198138 7198290 -113086022 + (TG)n Simple_repeat Simple_repeat 2 153 0 2 639 240 244 0 0 chr13 7198316 7198443 -113085869 + (TG)n Simple_repeat Simple_repeat 2 128 0 2 639 569 328 75 52 chr13 7198447 7198714 -113085598 - B4A SINE B4 0 292 20 2 639 2339 99 9 0 chr13 7198836 7199160 -113085152 + ORR1A2 LTR MaLR 1 327 0 2 639 6981 153 89 8 chr13 7199160 7200519 -113083793 + ORR1A2-int LTR MaLR 1 1469 -494 2 639 17368 59 5 1 chr13 7200540 7202868 -113081444 - L1Md_F2 LINE L1 0 5883 3548 2 639 5301 61 0 3 chr13 7202870 7203541 -113080771 + L1Md_F2 LINE L1 5907 6575 -7 2 639 3175 150 17 5 chr13 7203758 7204296 -113080016 + ORR1A2-int LTR MaLR 1453 1963 0 2 639 2238 117 9 0 chr13 7204296 7204612 -113079700 + ORR1A2 LTR MaLR 1 319 -8 2 639 475 264 174 0 chr13 7204837 7205015 -113079297 + B3 SINE B2 2 210 -6 2 639 484 226 0 10 chr13 7205117 7205220 -113079092 + MTE2b LTR MaLR 1 102 -277 2 639 307 317 39 70 chr13 7205563 7205692 -113078620 - PB1 SINE Alu -2 125 1 2 639 207 198 87 120 chr13 7206938 7207030 -113077282 - L2 LINE L2 -1018 2401 2313 2 639 26 0 0 0 chr13 7207133 7207159 -113077153 + AT_rich Low_complexity Low_complexity 1 26 0 2 639 231 36 0 0 chr13 7207188 7207216 -113077096 + (CCA)n Simple_repeat Simple_repeat 1 28 0 2 639 343 199 81 37 chr13 7207292 7207428 -113076884 + Lx2B LINE L1 6856 6997 -3 2 639 183 156 0 0 chr13 7208016 7208048 -113076264 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 639 1675 184 6 11 chr13 7208506 7208869 -113075443 - L1_Mur3 LINE L1 -1181 4699 4339 2 79 3212 168 90 10 chr13 7208951 7209683 -113074629 + L1_Mur3 LINE L1 5080 5870 -10 2 640 2065 81 25 3 chr13 7209906 7210192 -113074120 - L1_Mus1 LINE L1 -6 6561 6270 2 640 27 0 0 0 chr13 7211417 7211444 -113072868 + AT_rich Low_complexity Low_complexity 1 27 0 2 640 471 18 0 0 chr13 7211670 7211726 -113072586 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2 640 37092 31 2 6 chr13 7212853 7218826 -113065486 - L1Md_T LINE L1 0 6582 643 2 640 1054 278 57 124 chr13 7219067 7219470 -113064842 + MTE2a LTR MaLR 4 379 0 2 640 247 350 0 0 chr13 7220664 7220744 -113063568 - B1F SINE Alu -30 119 40 2 640 1238 278 59 5 chr13 7220854 7221227 -113063085 + Lx6 LINE L1 7030 7422 -38 2 640 34770 70 4 6 chr13 7221333 7227556 -113056756 - L1Md_F2 LINE L1 -1 6584 278 2 640 382 323 38 15 chr13 7227633 7227765 -113056547 - B1F SINE Alu -6 143 9 2 640 458 337 45 15 chr13 7227763 7227962 -113056350 + LTR40b LTR ERVL 41 245 -217 3 640 279 0 0 0 chr13 7228312 7228343 -113055969 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 640 229 176 14 29 chr13 7229686 7229756 -113054556 + CT-rich Low_complexity Low_complexity 1 69 0 3 640 684 349 64 22 chr13 7229919 7230373 -113053939 + MER110 LTR ERV1 10 482 -9 3 640 2379 115 8 6 chr13 7232216 7232574 -113051738 - Lx LINE L1 -12 6642 6284 3 640 436 155 61 10 chr13 7233642 7233740 -113050572 + Lx9 LINE L1 7332 7434 -210 3 640 719 319 56 59 chr13 7234372 7234659 -113049653 - B4 SINE B4 0 292 7 3 640 286 154 0 0 chr13 7234718 7234770 -113049542 + Lx6 LINE L1 7396 7447 -13 3 640 3318 30 5 2 chr13 7235068 7235463 -113048849 - MTA_Mm LTR MaLR 0 396 1 3 640 300 339 83 67 chr13 7236380 7236573 -113047739 - B3A SINE B2 0 198 3 3 640 210 105 0 0 chr13 7236590 7236628 -113047684 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 3 640 7292 154 34 7 chr13 7236713 7237968 -113046344 + Lx2B LINE L1 5705 6993 -7 3 640 1912 45 41 4 chr13 7238011 7238256 -113046056 - L1_Mus1 LINE L1 -3 6564 6311 3 640 22 56 0 0 chr13 7238403 7238439 -113045873 + AT_rich Low_complexity Low_complexity 1 36 0 3 640 410 320 0 10 chr13 7238639 7238743 -113045569 + B1_Mur2 SINE Alu 2 104 -45 3 640 313 312 89 34 chr13 7238733 7238912 -113045400 - B4A SINE B4 -102 190 2 3 640 261 0 0 0 chr13 7239963 7239992 -113044320 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 640 906 316 38 80 chr13 7240050 7240426 -113043886 - MTE2a LTR MaLR -13 406 51 3 640 267 234 39 13 chr13 7240468 7240546 -113043766 - Lx4B LINE L1 -547 6511 6432 3 640 19957 137 32 82 chr13 7240514 7243911 -113040401 - L1_Mur2 LINE L1 -650 5227 1832 3 640 257 68 23 0 chr13 7243911 7243955 -113040357 + (TTG)n Simple_repeat Simple_repeat 2 46 0 3 640 19957 166 68 70 chr13 7243955 7245431 -113038881 - L1_Mur2 LINE L1 -4046 1831 516 3 640 251 354 41 96 chr13 7245769 7245966 -113038346 + B4A SINE B4 53 238 -54 3 640 717 236 20 64 chr13 7246365 7246569 -113037743 + B3A SINE B2 4 198 0 3 640 22 0 0 0 chr13 7246636 7246658 -113037654 + AT_rich Low_complexity Low_complexity 1 22 0 3 640 6758 127 29 9 chr13 7247571 7248458 -113035854 - Lx LINE L1 -6 6648 5735 3 640 3554 121 67 34 chr13 7248458 7249041 -113035271 - RLTR1D LTR ERV1 0 605 4 3 640 6758 146 94 8 chr13 7249041 7249801 -113034511 - Lx LINE L1 -149 5734 4879 3 640 7075 110 41 10 chr13 7249813 7251168 -113033144 + L1_Mus3 LINE L1 5205 6635 -3 3 640 8386 163 58 22 chr13 7251164 7252850 -113031462 - L1_Mur2 LINE L1 -1008 4869 3124 3 640 3318 131 43 2 chr13 7252866 7253401 -113030911 - Lx3_Mus LINE L1 -3 7006 6450 3 640 1917 144 82 54 chr13 7253401 7253753 -113030559 - L1VL2 LINE L1 -5879 456 95 3 640 760 291 68 3 chr13 7253764 7254088 -113030224 - MTEa LTR MaLR -10 369 1 3 640 371 329 109 27 chr13 7254457 7254604 -113029708 - RSINE1 SINE B4 0 165 7 3 640 248 286 22 11 chr13 7254604 7254696 -113029616 + CT-rich Low_complexity Low_complexity 3 95 0 3 640 419 327 12 12 chr13 7258024 7258188 -113026124 + RSINE1 SINE B4 2 165 0 3 640 2538 45 0 0 chr13 7258232 7258543 -113025769 - L1Md_F2 LINE L1 -626 5956 5646 3 640 4453 67 43 3 chr13 7258543 7259145 -113025167 + L1Md_F2 LINE L1 5957 6582 0 3 640 1870 137 13 16 chr13 7260169 7260481 -113023831 + RLTR10E LTR ERVK 1 311 0 3 640 393 129 0 0 chr13 7260743 7260813 -113023499 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 640 192 120 60 0 chr13 7261447 7261497 -113022815 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 640 768 287 65 36 chr13 7261697 7261972 -113022340 + B4A SINE B4 1 283 -9 3 640 262 330 0 96 chr13 7262953 7263057 -113021255 + MTEa LTR MaLR 1 94 -285 3 640 885 318 48 34 chr13 7263180 7263594 -113020718 + MT2A LTR ERVL 81 500 -33 3 640 265 316 111 45 chr13 7263609 7263808 -113020504 + MTEa LTR MaLR 114 325 -54 3 640 260 268 35 35 chr13 7264161 7264277 -113020035 - L1MC LINE L1 -606 5727 5612 3 640 836 290 57 50 chr13 7264524 7264718 -113019594 - RCHARR1 DNA MER1_type -36 938 742 3 640 883 257 19 0 chr13 7264718 7264924 -113019388 + B3 SINE B2 1 210 -6 3 640 836 290 57 50 chr13 7264924 7265113 -113019199 - RCHARR1 DNA MER1_type -233 741 552 3 640 234 202 39 181 chr13 7265971 7266098 -113018214 - L3 LINE CR1 -1794 2695 2587 3 640 231 36 0 0 chr13 7266649 7266677 -113017635 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 640 625 274 104 113 chr13 7267573 7267673 -113016639 + MTE2a LTR MaLR 95 193 -186 3 640 315 0 0 0 chr13 7267673 7267708 -113016604 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 640 1011 82 0 0 chr13 7267711 7267846 -113016466 - B1_Mm SINE Alu -12 135 1 3 640 625 274 104 113 chr13 7267846 7267971 -113016341 + MTE2a LTR MaLR 194 322 -57 3 640 334 344 89 17 chr13 7268198 7268491 -113015821 + MamRep434 DNA TcMar 104 417 -9 3 640 180 333 0 0 chr13 7268556 7268604 -113015708 - MIR SINE MIR -143 65 18 3 640 414 0 0 0 chr13 7269135 7269181 -113015131 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 640 609 291 50 65 chr13 7269426 7269705 -113014607 - MER5C DNA MER1_type 0 313 39 3 640 344 372 21 28 chr13 7270293 7270434 -113013878 + B1F2 SINE Alu 9 148 -1 3 640 443 126 11 0 chr13 7271103 7271198 -113013114 + (GA)n Simple_repeat Simple_repeat 2 97 0 3 640 206 79 60 60 chr13 7271209 7271276 -113013036 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 3 640 4667 82 10 6 chr13 7271775 7272403 -113011909 + L1Md_F2 LINE L1 5941 6570 -12 3 640 3031 211 97 18 chr13 7272610 7273412 -113010900 + Lx9 LINE L1 6778 7643 -1 3 640 21 0 0 0 chr13 7273553 7273574 -113010738 + AT_rich Low_complexity Low_complexity 1 21 0 3 640 23 54 0 0 chr13 7273736 7273773 -113010539 + AT_rich Low_complexity Low_complexity 1 37 0 3 640 426 283 138 11 chr13 7274020 7274209 -113010103 - ORR1C2 LTR MaLR 0 384 172 3 640 610 91 53 29 chr13 7274253 7274423 -113009889 + GA-rich Low_complexity Low_complexity 2 175 0 3 640 1567 115 4 4 chr13 7274424 7274660 -113009652 - IAPEz-int LTR ERVK -4886 1595 1360 3 640 2087 100 18 30 chr13 7274668 7274997 -113009315 - IAPLTR2b LTR ERVK -2 325 1 3 640 6117 39 24 12 chr13 7274999 7275761 -113008551 - IAPEz-int LTR ERVK -2 6479 5709 3 640 3087 22 0 0 chr13 7275752 7276109 -113008203 - IAPEz-int LTR ERVK -2124 4357 4001 3 640 387 89 0 0 chr13 7276107 7276163 -113008149 - IAPEz-int LTR ERVK -3707 2774 2719 3 640 15407 98 30 31 chr13 7276162 7278506 -113005806 - IAPEz-int LTR ERVK -4136 2345 3 3 640 2092 95 19 31 chr13 7278509 7278834 -113005478 - IAPLTR2b LTR ERVK -6 321 1 3 640 682 204 36 154 chr13 7278877 7279097 -113005215 - ORR1C2 LTR MaLR -190 194 1 3 640 192 138 46 0 chr13 7279833 7279898 -113004414 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 640 42 36 0 0 chr13 7280108 7280164 -113004148 + AT_rich Low_complexity Low_complexity 1 56 0 3 640 943 9 8 8 chr13 7280371 7280488 -113003824 + (TCTA)n Simple_repeat Simple_repeat 4 120 0 3 640 262 286 91 0 chr13 7280637 7280714 -113003598 - B1F1 SINE Alu -49 100 17 3 640 560 259 20 0 chr13 7281636 7281783 -113002529 + Lx6 LINE L1 7295 7444 -16 3 640 2515 186 24 10 chr13 7281961 7282472 -113001840 + RLTR28 LTR ERVL 3 520 -4 3 640 509 203 93 8 chr13 7282541 7282670 -113001642 + RSINE1 SINE B4 5 144 -21 3 640 516 305 61 118 chr13 7282925 7283150 -113001162 + B4A SINE B4 13 238 -54 3 640 1638 203 35 45 chr13 7283150 7283526 -113000786 - ORR1D1 LTR MaLR -2 372 1 3 640 516 305 61 118 chr13 7283526 7283597 -113000715 + B4A SINE B4 239 292 0 3 640 2897 86 25 12 chr13 7283704 7284104 -113000208 - MTB_Mm LTR MaLR -2 405 1 3 640 505 314 139 23 chr13 7284185 7284443 -112999869 + B4A SINE B4 1 288 -4 3 640 227 241 56 0 chr13 7284648 7284702 -112999610 + MamSINE1 SINE tRNA 229 285 -5 3 640 256 360 108 32 chr13 7286485 7286643 -112997669 - B4A SINE B4 -121 171 2 3 640 219 368 80 130 chr13 7287136 7287336 -112996976 + B4 SINE B4 99 288 -4 3 640 893 146 21 7 chr13 7287379 7287524 -112996788 + B1_Mur4 SINE Alu 2 148 -2 3 640 203 146 0 47 chr13 7287526 7287569 -112996743 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 3 640 23 68 0 0 chr13 7288203 7288247 -112996065 + AT_rich Low_complexity Low_complexity 1 44 0 3 640 1979 181 78 47 chr13 7288299 7288462 -112995850 - RMER1B Other Other -2 1064 919 3 640 1104 52 15 0 chr13 7288462 7288596 -112995716 + B1_Mus2 SINE Alu 1 136 -11 3 640 519 17 0 0 chr13 7288596 7288656 -112995656 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 3 640 1979 181 78 47 chr13 7288656 7288955 -112995357 - RMER1B Other Other -148 918 588 3 640 870 264 47 9 chr13 7288983 7289257 -112995055 - RMER1B Other Other -642 424 2 3 640 210 162 40 81 chr13 7289394 7289468 -112994844 + A-rich Low_complexity Low_complexity 4 74 0 3 640 207 0 0 0 chr13 7289468 7289491 -112994821 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 640 387 0 0 0 chr13 7289491 7289533 -112994779 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 640 3089 297 19 25 chr13 7289534 7290594 -112993718 - Lx7 LINE L1 -393 7303 6250 3 640 5071 108 32 14 chr13 7290605 7291383 -112992929 - Lx LINE L1 0 6654 5863 3 640 2181 193 0 0 chr13 7291383 7291793 -112992519 + L1_Mm LINE L1 5467 5876 -7 3 640 556 301 29 0 chr13 7292329 7292465 -112991847 + RSINE1 SINE B4 2 141 -24 3 640 366 23 0 0 chr13 7292467 7292510 -112991802 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 640 189 121 0 0 chr13 7292923 7292956 -112991356 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 3 640 414 0 0 0 chr13 7292963 7293009 -112991303 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 640 26 0 0 0 chr13 7293085 7293111 -112991201 + AT_rich Low_complexity Low_complexity 1 26 0 3 640 1056 256 17 31 chr13 7293937 7294231 -112990081 - B4 SINE B4 0 292 3 3 640 302 344 19 44 chr13 7294797 7294955 -112989357 + HAL1-3A_ME LINE L1 2276 2429 -429 3 640 626 275 39 50 chr13 7295772 7295952 -112988360 + B3 SINE B2 39 216 0 3 640 655 299 17 17 chr13 7296177 7296357 -112987955 - B3 SINE B2 -29 187 8 3 640 391 237 17 8 chr13 7296489 7296608 -112987704 + Lx7 LINE L1 6998 7117 -579 4 640 287 158 0 0 chr13 7296636 7296693 -112987619 + Lx7 LINE L1 7061 7117 -579 4 640 21 71 0 0 chr13 7296905 7296947 -112987365 + AT_rich Low_complexity Low_complexity 1 42 0 4 640 496 346 88 47 chr13 7296952 7297483 -112986829 + L1M4c LINE L1 1181 1733 -4651 4 640 7824 44 1 6 chr13 7297524 7299121 -112985191 - L1Md_F2 LINE L1 -1 6581 4990 4 640 400 311 53 63 chr13 7299166 7299485 -112984827 - Lx8 LINE L1 -6 7467 7152 4 640 387 0 0 0 chr13 7299879 7299922 -112984390 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 640 253 0 0 51 chr13 7300137 7300176 -112984136 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 4 640 2093 117 39 0 chr13 7300185 7300519 -112983793 - Lx3B LINE L1 -3 6970 6624 4 640 285 29 0 0 chr13 7300546 7300580 -112983732 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 640 369 0 0 0 chr13 7301068 7301109 -112983203 + (TTA)n Simple_repeat Simple_repeat 2 42 0 4 640 1172 56 0 0 chr13 7301111 7301253 -112983059 - B1_Mus1 SINE Alu -6 142 1 4 640 938 228 15 5 chr13 7302467 7302670 -112981642 - URR1A DNA MER1_type -20 206 2 4 640 309 235 28 42 chr13 7303312 7303383 -112980929 - HAL1-3A_ME LINE L1 -813 2045 1976 4 640 429 285 99 19 chr13 7303484 7303645 -112980667 - B4A SINE B4 -118 174 1 4 640 219 322 0 139 chr13 7304683 7304715 -112979597 + B4 SINE B4 64 81 -211 4 640 451 282 37 37 chr13 7304715 7304851 -112979461 + B1_Mur1 SINE Alu 1 136 -13 4 640 1152 106 0 0 chr13 7304865 7305035 -112979277 + (GAAA)n Simple_repeat Simple_repeat 1 170 0 4 640 2754 80 8 5 chr13 7305129 7305508 -112978804 - L1Md_F2 LINE L1 -2 6580 6201 4 640 852 249 143 24 chr13 7305511 7305930 -112978382 - MER63D DNA AcHobo -503 558 90 4 640 616 295 30 13 chr13 7306015 7306245 -112978067 + Lx9 LINE L1 7151 7384 -260 4 640 264 283 0 42 chr13 7306248 7306366 -112977946 + Lx9 LINE L1 7532 7644 0 4 640 862 271 59 15 chr13 7306431 7306633 -112977679 + ID_B1 SINE B4 9 219 -5 4 640 805 270 0 5 chr13 7308926 7309123 -112975189 + B3 SINE B2 5 200 -16 4 640 180 0 0 0 chr13 7309123 7309143 -112975169 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 4 640 1709 170 105 3 chr13 7309189 7309561 -112974751 - RMER1B Other Other 0 1066 657 4 640 186 43 0 0 chr13 7309569 7309592 -112974720 + (TGGGGG)n Simple_repeat Simple_repeat 4 26 0 4 640 1609 245 79 81 chr13 7309592 7310473 -112973839 + RMER13B LTR ERVK 7 926 -32 4 640 440 262 146 23 chr13 7310473 7310678 -112973634 - RMER1B Other Other -439 591 362 4 640 861 263 132 52 chr13 7310662 7311147 -112973165 - RMER1B Other Other -498 568 45 4 640 299 351 22 5 chr13 7311357 7311683 -112972629 - L1M5 LINE L1 -595 5645 5314 4 640 180 77 0 0 chr13 7312182 7312208 -112972104 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 640 450 0 0 0 chr13 7312973 7313023 -112971289 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 640 477 90 0 0 chr13 7313573 7313640 -112970672 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 640 182 328 83 33 chr13 7313705 7313825 -112970487 + MIR SINE MIR 111 236 -26 4 640 381 22 0 0 chr13 7314293 7314339 -112969973 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 640 594 282 6 43 chr13 7314357 7314520 -112969792 - B3A SINE B2 -41 157 1 4 640 1190 181 18 22 chr13 7314539 7314765 -112969547 + URR1B DNA MER1_type 1 225 0 4 640 182 117 48 32 chr13 7314893 7314955 -112969357 + T-rich Low_complexity Low_complexity 3 65 0 4 640 1408 190 78 73 chr13 7314999 7315356 -112968956 + ORR1D1 LTR MaLR 1 359 -15 4 640 23 54 0 0 chr13 7316293 7316330 -112967982 + AT_rich Low_complexity Low_complexity 1 37 0 4 640 252 396 29 17 chr13 7316518 7316690 -112967622 - MER44B DNA MER2_type -250 300 127 4 640 22 56 0 0 chr13 7316838 7316874 -112967438 + AT_rich Low_complexity Low_complexity 1 36 0 4 640 277 117 16 16 chr13 7316927 7316988 -112967324 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 640 570 76 19 19 chr13 7317203 7317310 -112967002 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 4 640 2114 183 22 10 chr13 7317715 7318129 -112966183 + Lx2B LINE L1 6579 6997 -3 4 640 319 354 57 0 chr13 7318873 7319031 -112965281 + Lx8 LINE L1 7041 7207 -266 4 640 1046 238 72 103 chr13 7320247 7320636 -112963676 - MTE2a LTR MaLR -2 377 1 4 640 257 0 30 0 chr13 7320642 7320675 -112963637 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 640 489 124 20 10 chr13 7321088 7321186 -112963126 + (TA)n Simple_repeat Simple_repeat 1 99 0 4 640 198 118 0 0 chr13 7321204 7321238 -112963074 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 640 305 259 33 66 chr13 7321326 7321417 -112962895 - RSINE1 SINE B4 -76 89 2 4 640 332 328 42 16 chr13 7321662 7321854 -112962458 - L1_Mur3 LINE L1 -321 5559 5363 4 640 3249 34 0 0 chr13 7321861 7322246 -112962066 + L1Md_F3 LINE L1 6186 6570 -14 4 640 306 0 0 0 chr13 7322438 7322472 -112961840 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 4 640 445 281 26 0 chr13 7322518 7322632 -112961680 - RSINE1 SINE B4 -45 120 4 4 640 312 70 0 0 chr13 7323315 7323358 -112960954 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 640 306 296 96 22 chr13 7323566 7323701 -112960611 - B1F2 SINE Alu 0 149 5 4 640 225 0 0 0 chr13 7323993 7324018 -112960294 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 640 537 16 0 0 chr13 7324018 7324079 -112960233 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 640 565 311 13 20 chr13 7324080 7324231 -112960081 - B3A SINE B2 -48 150 1 4 640 334 325 8 31 chr13 7325418 7325545 -112958767 + MLT1A0 LTR MaLR 8 131 -234 4 640 901 91 98 0 chr13 7325556 7325688 -112958624 + B1_Mus1 SINE Alu 4 148 0 4 640 187 407 0 0 chr13 7326225 7326316 -112957996 + MIR SINE MIR 171 261 -1 4 640 211 244 0 0 chr13 7326542 7326587 -112957725 + (TTA)n Simple_repeat Simple_repeat 2 46 0 4 640 416 304 0 28 chr13 7326801 7326868 -112957444 + MER3 DNA MER1_type 6 72 -137 4 640 778 275 46 77 chr13 7326868 7327234 -112957078 - ORR1E LTR MaLR -2 357 3 4 640 416 304 0 28 chr13 7327234 7327308 -112957004 + MER3 DNA MER1_type 73 143 -66 4 640 2732 135 193 53 chr13 7328666 7328987 -112955325 - RMER17A LTR ERVK 0 751 394 4 640 939 102 6 33 chr13 7328987 7329169 -112955143 + (GAGAA)n Simple_repeat Simple_repeat 1 177 0 4 640 2732 135 193 53 chr13 7329169 7329506 -112954806 - RMER17A LTR ERVK -358 393 1 4 640 485 205 0 8 chr13 7331104 7331222 -112953090 + CT-rich Low_complexity Low_complexity 2 118 0 4 640 288 0 0 0 chr13 7331222 7331254 -112953058 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 640 325 225 0 134 chr13 7331264 7331346 -112952966 - BC1_Mm scRNA scRNA -81 71 1 4 640 441 0 0 0 chr13 7331534 7331583 -112952729 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 640 2541 100 13 5 chr13 7332042 7332414 -112951898 - L1_Mus3 LINE L1 -2 6636 6262 4 640 3293 39 3 0 chr13 7332458 7332842 -112951470 - IAPEY_LTR LTR ERVK 0 385 1 4 640 335 324 84 45 chr13 7333032 7333187 -112951125 - RSINE1 SINE B4 -2 163 3 4 640 315 150 0 0 chr13 7333362 7333422 -112950890 + (CATA)n Simple_repeat Simple_repeat 4 63 0 4 640 1081 231 11 86 chr13 7333670 7333993 -112950319 + RMER19C LTR ERVK 1 503 -399 4 640 4237 19 14 0 chr13 7333993 7334479 -112949833 - MT2_Mm LTR ERVL 0 493 1 4 640 1043 282 78 40 chr13 7334479 7334849 -112949463 + RMER19C LTR ERVK 504 896 -6 4 640 273 268 0 44 chr13 7335241 7335331 -112948981 - MIR SINE MIR -119 143 58 4 640 189 0 0 0 chr13 7336965 7336986 -112947326 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 640 482 0 17 0 chr13 7336986 7337043 -112947269 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 640 643 355 7 89 chr13 7337066 7337276 -112947036 + B4A SINE B4 1 199 -93 4 640 2358 111 3 0 chr13 7337276 7337601 -112946711 - ORR1A2 LTR MaLR 0 327 2 4 640 643 355 7 89 chr13 7337601 7337681 -112946631 + B4A SINE B4 200 267 -25 4 640 233 300 17 0 chr13 7338029 7338089 -112946223 - Lx8 LINE L1 -861 6612 6552 4 640 681 297 163 4 chr13 7338118 7338388 -112945924 - MTD LTR MaLR -2 417 105 4 640 441 63 0 0 chr13 7338388 7338425 -112945887 + (A)n Simple_repeat Simple_repeat 1 37 0 4 640 1137 75 0 0 chr13 7338425 7338572 -112945740 + B1_Mus2 SINE Alu 1 147 0 4 640 441 63 0 0 chr13 7338572 7338597 -112945715 + (A)n Simple_repeat Simple_repeat 1 25 0 4 640 381 231 66 0 chr13 7338597 7338688 -112945624 - MTD LTR MaLR -301 120 24 4 9 36301 32 1 8 chr13 7338688 7343867 -112940445 + L1Md_T LINE L1 449 5586 -297 4 641 8384 36 1 0 chr13 7343867 7344862 -112939450 + L1Md_T LINE L1 5587 6582 0 4 641 236 196 0 0 chr13 7344862 7344908 -112939404 - MTD LTR MaLR -375 46 1 4 641 782 264 94 9 chr13 7344919 7345152 -112939160 - Lx8 LINE L1 -948 6525 6273 4 641 456 342 62 56 chr13 7345150 7345438 -112938874 + Lx8 LINE L1 7175 7464 -9 4 641 182 118 0 29 chr13 7345614 7345649 -112938663 + (CCCCCT)n Simple_repeat Simple_repeat 3 36 0 4 641 472 348 0 0 chr13 7347066 7347181 -112937131 + PB1D9 SINE Alu 1 115 -5 4 641 377 319 63 4 chr13 7347422 7347661 -112936651 - L1MA4 LINE L1 -383 5917 5665 4 641 809 306 53 29 chr13 7347655 7348210 -112936102 + L1M2 LINE L1 4881 5464 -416 4 641 3478 142 54 43 chr13 7348699 7349326 -112934986 + Lx3C LINE L1 6341 6974 -2 4 641 1124 75 0 0 chr13 7349496 7349642 -112934670 + B1_Mm SINE Alu 2 147 0 4 641 713 152 7 0 chr13 7349642 7349780 -112934532 + GA-rich Low_complexity Low_complexity 2 140 0 4 641 512 298 127 25 chr13 7349935 7350179 -112934133 - B4A SINE B4 -19 273 5 4 641 896 218 63 16 chr13 7350230 7350421 -112933891 - B3 SINE B2 -13 203 4 4 641 294 29 0 0 chr13 7351410 7351445 -112932867 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 641 696 294 75 14 chr13 7351469 7351683 -112932629 - B4A SINE B4 -51 241 15 4 641 389 244 241 11 chr13 7353013 7353187 -112931125 - B3 SINE B2 0 216 3 5 641 21 0 0 0 chr13 7353507 7353528 -112930784 + AT_rich Low_complexity Low_complexity 1 21 0 5 641 270 136 0 0 chr13 7353697 7353741 -112930571 + (CAA)n Simple_repeat Simple_repeat 2 45 0 5 641 216 0 0 0 chr13 7354253 7354277 -112930035 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 641 596 260 82 20 chr13 7354285 7354481 -112929831 - ID_B1 SINE B4 -14 210 3 5 641 298 179 30 50 chr13 7354689 7354789 -112929523 + (TATATG)n Simple_repeat Simple_repeat 2 99 0 5 641 232 204 0 0 chr13 7355084 7355133 -112929179 + Lx8 LINE L1 7425 7473 0 5 641 438 20 0 0 chr13 7355599 7355650 -112928662 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 641 225 0 0 0 chr13 7356744 7356769 -112927543 + (A)n Simple_repeat Simple_repeat 1 25 0 5 641 1103 83 7 0 chr13 7357428 7357573 -112926739 + B1_Mus1 SINE Alu 3 148 0 5 641 367 378 79 44 chr13 7357673 7357991 -112926321 + MLT1E1A LTR MaLR 352 680 0 5 641 693 73 0 0 chr13 7358385 7358481 -112925831 + (TC)n Simple_repeat Simple_repeat 1 96 0 5 641 21 36 0 0 chr13 7359278 7359306 -112925006 + AT_rich Low_complexity Low_complexity 1 28 0 5 641 270 0 0 0 chr13 7361176 7361206 -112923106 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 641 889 315 36 43 chr13 7361360 7361639 -112922673 + B4 SINE B4 10 286 -6 5 641 438 374 29 0 chr13 7361752 7361891 -112922421 - RSINE1 SINE B4 -19 146 4 5 641 2511 114 77 0 chr13 7362415 7362844 -112921468 - L1_Mur2 LINE L1 -2624 3253 2792 5 641 1390 192 32 0 chr13 7362931 7363243 -112921069 + Lx6 LINE L1 1271 1592 -4288 5 641 1514 177 54 0 chr13 7363227 7363544 -112920768 + Lx6 LINE L1 3646 3979 -1901 5 641 1714 173 74 3 chr13 7363562 7363915 -112920397 + Lx6 LINE L1 4540 4917 -963 5 641 30907 88 14 8 chr13 7363913 7367465 -112916847 + L1Md_F2 LINE L1 621 4208 -1675 5 641 288 0 0 0 chr13 7367465 7367497 -112916815 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 641 30907 84 7 3 chr13 7367497 7367643 -112916669 + L1Md_F2 LINE L1 4209 4353 -1530 5 641 3322 40 0 5 chr13 7367643 7368041 -112916271 - MTA_Mm LTR MaLR 0 396 1 5 641 30907 84 7 3 chr13 7368041 7369278 -112915034 + L1Md_F2 LINE L1 4354 5585 -298 5 641 7535 75 1 6 chr13 7369279 7370278 -112914034 + L1Md_F2 LINE L1 5587 6580 -2 5 641 3321 204 38 24 chr13 7370279 7370968 -112913344 + Lx6 LINE L1 5073 5777 -103 5 641 792 108 14 21 chr13 7370968 7371110 -112913202 + L1_Mus3 LINE L1 6496 6636 -2 5 641 3321 242 68 37 chr13 7371110 7371503 -112912809 + Lx6 LINE L1 5778 6195 -1265 5 641 2397 233 67 26 chr13 7371569 7372178 -112912134 + Lx6 LINE L1 6823 7456 -4 5 641 962 254 34 120 chr13 7372337 7372686 -112911626 + MTE2a LTR MaLR 36 354 -25 5 641 660 273 112 27 chr13 7374488 7374748 -112909564 - B4A SINE B4 -6 286 5 5 641 23 0 0 0 chr13 7376453 7376476 -112907836 + AT_rich Low_complexity Low_complexity 1 23 0 5 641 324 0 0 0 chr13 7376578 7376614 -112907698 + (TATG)n Simple_repeat Simple_repeat 4 39 0 5 641 262 360 0 0 chr13 7376614 7376692 -112907620 - RSINE1 SINE B4 -10 155 78 5 641 1030 331 39 2 chr13 7377004 7377489 -112906823 - L1M2 LINE L1 -1095 5048 4546 5 641 300 53 0 0 chr13 7377709 7377747 -112906565 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 641 226 114 0 0 chr13 7377889 7377924 -112906388 - L1_Mur1 LINE L1 -1354 4532 4498 5 641 220 365 34 25 chr13 7380457 7380575 -112903737 - ID_B1 SINE B4 -81 143 25 5 641 23 0 0 0 chr13 7381093 7381116 -112903196 + AT_rich Low_complexity Low_complexity 1 23 0 5 641 26 0 0 0 chr13 7381830 7381856 -112902456 + AT_rich Low_complexity Low_complexity 1 26 0 5 641 24 0 0 0 chr13 7382390 7382414 -112901898 + AT_rich Low_complexity Low_complexity 1 24 0 5 641 4545 94 0 8 chr13 7382593 7383216 -112901096 + L1_Mus1 LINE L1 5949 6566 -1 5 641 734 224 42 32 chr13 7384552 7384741 -112899571 - MT2B LTR ERVL -63 538 348 5 641 539 141 0 0 chr13 7384745 7384823 -112899489 - MT2B LTR ERVL -523 78 1 5 641 519 17 0 0 chr13 7384845 7384905 -112899407 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 641 558 194 31 0 chr13 7384954 7385083 -112899229 - Lx2B LINE L1 -811 6189 6057 5 641 340 284 34 68 chr13 7385440 7385557 -112898755 + B3A SINE B2 1 113 -85 5 641 3097 93 36 7 chr13 7385557 7386233 -112898079 + L1_Mus2 LINE L1 5423 6603 -35 5 641 22 0 0 0 chr13 7386343 7386365 -112897947 + GC_rich Low_complexity Low_complexity 1 22 0 5 641 723 140 0 0 chr13 7387681 7387838 -112896474 + (GA)n Simple_repeat Simple_repeat 2 158 0 5 641 1151 55 7 0 chr13 7389348 7389494 -112894818 + B1_Mus2 SINE Alu 1 147 0 5 641 477 76 0 0 chr13 7389822 7389888 -112894424 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 641 339 123 37 0 chr13 7389997 7390078 -112894234 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 5 641 362 267 38 0 chr13 7390114 7390245 -112894067 + (TCTA)n Simple_repeat Simple_repeat 4 139 0 5 641 998 150 0 11 chr13 7391702 7391884 -112892428 + CT-rich Low_complexity Low_complexity 1 180 0 5 641 636 254 0 0 chr13 7391924 7392054 -112892258 - B3 SINE B2 -86 130 1 5 641 415 337 35 0 chr13 7392105 7392277 -112892035 - B3A SINE B2 -18 180 3 5 641 446 319 14 28 chr13 7392475 7392617 -112891695 - ID_B1 SINE B4 0 224 85 5 641 500 305 26 7 chr13 7393411 7393566 -112890746 + Lx5 LINE L1 6094 6251 -799 5 641 811 247 29 6 chr13 7393578 7393749 -112890563 + RMER20B LTR ERVK 20 194 -433 5 641 228 218 18 0 chr13 7393785 7393816 -112890496 + RMER20B LTR ERVK 307 338 -289 5 641 243 0 0 0 chr13 7393816 7393843 -112890469 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 641 228 218 18 0 chr13 7393843 7393866 -112890446 + RMER20B LTR ERVK 339 361 -266 5 641 378 0 0 0 chr13 7393866 7393908 -112890404 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 641 746 229 0 28 chr13 7393979 7394123 -112890189 + RMER20B LTR ERVK 486 625 -2 5 641 1660 273 45 115 chr13 7394125 7394792 -112889520 + Lx5 LINE L1 6245 6864 -186 5 641 1386 235 71 23 chr13 7394799 7395152 -112889160 + RLTR17 LTR ERVK 245 614 -78 5 641 245 284 95 0 chr13 7395665 7395739 -112888573 + PB1 SINE Alu 44 124 -3 5 641 26 0 0 0 chr13 7395739 7395765 -112888547 + AT_rich Low_complexity Low_complexity 1 26 0 5 641 286 260 0 8 chr13 7395994 7396118 -112888194 + ORR1B1-int LTR MaLR 632 754 -755 5 641 953 63 48 0 chr13 7396019 7396145 -112888167 + B1_Mm SINE Alu 9 140 -7 5 641 423 0 0 0 chr13 7396148 7396195 -112888117 + (TAA)n Simple_repeat Simple_repeat 2 48 0 5 641 201 74 0 0 chr13 7397312 7397339 -112886973 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 641 261 0 0 0 chr13 7397596 7397625 -112886687 + (A)n Simple_repeat Simple_repeat 1 29 0 5 641 569 61 0 100 chr13 7398061 7398261 -112886051 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 641 35664 38 1 1 chr13 7398615 7403586 -112880726 + L1Md_A LINE L1 593 5564 -319 5 641 8317 37 1 0 chr13 7403586 7404579 -112879733 + L1Md_A LINE L1 5588 6581 -1 5 641 30020 83 1 4 chr13 7404588 7407750 -112876562 + L1Md_F2 LINE L1 1442 4606 -1277 5 641 3270 74 0 2 chr13 7407750 7408183 -112876129 + L1Md_F2 LINE L1 6139 6570 -12 5 641 30020 83 1 4 chr13 7408183 7408491 -112875821 + L1Md_F2 LINE L1 4607 4902 -981 5 641 2027 81 86 133 chr13 7408491 7408874 -112875438 - RLTR10B2 LTR ERVK 0 365 1 5 641 30020 83 1 4 chr13 7408874 7409558 -112874754 + L1Md_F2 LINE L1 4903 5585 -298 5 641 7451 70 8 10 chr13 7409559 7410556 -112873756 + L1Md_F2 LINE L1 5587 6581 -1 5 641 530 186 8 8 chr13 7410556 7410675 -112873637 + URR1B DNA MER1_type 101 219 -6 5 641 7524 79 8 1 chr13 7412017 7413179 -112871133 + L1_Mus1 LINE L1 5399 6566 -1 5 641 392 97 16 0 chr13 7413730 7413792 -112870520 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 641 2588 78 0 3 chr13 7415104 7415453 -112868859 + L1_Mus1 LINE L1 6219 6566 -1 5 641 180 0 0 0 chr13 7415529 7415549 -112868763 + (A)n Simple_repeat Simple_repeat 1 20 0 5 641 312 304 53 46 chr13 7415765 7415917 -112868395 + MER58B DNA MER1_type 172 324 -17 5 641 225 284 80 13 chr13 7416000 7416075 -112868237 + MLT1J LTR MaLR 116 195 -317 5 641 2003 42 4 0 chr13 7416575 7416816 -112867496 + L1Md_F2 LINE L1 5345 5586 -297 5 641 7706 61 10 6 chr13 7416817 7417807 -112866505 + L1Md_F2 LINE L1 5588 6581 -1 5 641 225 240 93 0 chr13 7418354 7418429 -112865883 + L1MEg LINE L1 1384 1465 -4619 5 641 855 29 0 0 chr13 7418794 7418896 -112865416 + (TC)n Simple_repeat Simple_repeat 2 103 0 5 641 12112 131 44 40 chr13 7419339 7421549 -112862763 + Lx4A LINE L1 786 3048 -2829 5 641 243 0 0 0 chr13 7421549 7421576 -112862736 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 641 12112 127 26 43 chr13 7421576 7421736 -112862576 + Lx4A LINE L1 3049 3213 -2664 5 641 438 20 0 0 chr13 7421736 7421787 -112862525 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 641 12112 127 26 43 chr13 7421787 7422052 -112862260 + Lx4A LINE L1 3214 3438 -2439 5 641 1144 94 83 0 chr13 7422051 7422232 -112862080 + Lx4A LINE L1 4417 4612 -1265 5 641 8380 148 71 8 chr13 7422207 7423859 -112860453 + Lx4A LINE L1 5293 7058 0 5 641 227 246 0 14 chr13 7423864 7423934 -112860378 + Lx7 LINE L1 7601 7669 -27 5 641 35 0 0 0 chr13 7424446 7424481 -112859831 + AT_rich Low_complexity Low_complexity 1 35 0 5 641 186 214 23 23 chr13 7424589 7424632 -112859680 - MIR SINE MIR -77 131 89 5 641 541 322 15 19 chr13 7424720 7424952 -112859360 - Lx8 LINE L1 -160 7484 7164 5 641 208 135 0 0 chr13 7424954 7424991 -112859321 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 641 534 196 19 0 chr13 7424992 7425310 -112859002 + (TAGA)n Simple_repeat Simple_repeat 1 324 0 5 641 484 311 108 14 chr13 7426042 7426264 -112858048 - B4A SINE B4 -44 248 6 5 641 1135 220 126 33 chr13 7426807 7427108 -112857204 - ORR1A4 LTR MaLR 0 329 1 5 641 186 340 0 0 chr13 7427148 7427201 -112857111 + L3b LINE CR1 336 388 -94 5 641 1120 255 169 3 chr13 7427262 7427612 -112856700 - MTD LTR MaLR -9 410 3 5 641 357 24 0 0 chr13 7427829 7427871 -112856441 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 641 231 122 0 24 chr13 7429250 7429292 -112855020 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 641 253 198 11 11 chr13 7429292 7429379 -112854933 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 641 252 143 24 0 chr13 7429621 7429663 -112854649 - ORR1A3 LTR MaLR -12 314 272 5 641 5988 111 25 28 chr13 7429673 7430612 -112853700 - Lx LINE L1 -4 6650 5715 5 641 463 165 0 0 chr13 7430610 7430689 -112853623 + L1_Mur2 LINE L1 5119 5197 -680 5 641 3262 48 5 0 chr13 7430761 7431155 -112853157 - MTA_Mm LTR MaLR 0 396 1 5 641 722 85 0 0 chr13 7431417 7431511 -112852801 + L1Md_F2 LINE L1 5493 5586 -297 5 641 7540 74 2 2 chr13 7431512 7432491 -112851821 + L1Md_F2 LINE L1 5588 6566 -16 5 641 330 340 37 28 chr13 7432838 7432947 -112851365 - PB1D7 SINE Alu -8 112 3 5 641 518 241 98 39 chr13 7433008 7433211 -112851101 - B3 SINE B2 0 216 2 5 641 211 349 121 0 chr13 7433216 7433282 -112851030 - PB1D10 SINE Alu -39 78 5 5 641 737 164 296 6 chr13 7433843 7434015 -112850297 + MTD LTR MaLR 198 419 0 6 641 697 36 26 43 chr13 7434604 7434720 -112849592 + L1Md_F3 LINE L1 6470 6583 -1 6 641 198 103 0 0 chr13 7436236 7436265 -112848047 + (TTTTC)n Simple_repeat Simple_repeat 5 33 0 6 641 6567 122 38 10 chr13 7436266 7437029 -112847283 - Lx LINE L1 -2 6652 5877 6 641 516 16 0 0 chr13 7437029 7437090 -112847222 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 641 6567 136 18 6 chr13 7437090 7437664 -112846648 - Lx LINE L1 -778 5876 5288 6 641 28964 25 0 0 chr13 7437658 7441732 -112842580 - L1Md_T LINE L1 0 6582 2508 6 641 419 75 0 0 chr13 7441732 7441785 -112842527 - MusHAL1 LINE L1 -1634 1078 1026 6 641 15578 126 16 6 chr13 7441781 7446163 -112838149 - Lx LINE L1 -1086 4800 364 6 641 238 244 61 82 chr13 7446403 7446501 -112837811 + B2_Mm2 SINE B2 65 160 -35 6 641 786 141 7 43 chr13 7446732 7446873 -112837439 + RLTR41 LTR ERV1 308 443 -3 6 641 609 365 55 18 chr13 7448048 7448612 -112835700 + MuRRS4-int LTR ERV1 1284 1868 -5910 6 641 346 286 106 17 chr13 7448703 7448885 -112835427 + MuRRS4-int LTR ERV1 2944 3117 -1946 6 641 1325 288 48 15 chr13 7449279 7449737 -112834575 + MuRRS4-int LTR ERV1 3533 4005 -1058 6 641 692 284 5 9 chr13 7450575 7450851 -112833461 + MuRRS4-int LTR ERV1 4663 4888 -175 6 641 1513 148 60 98 chr13 7450963 7451299 -112833013 + RLTR41 LTR ERV1 61 383 -63 6 641 395 92 15 0 chr13 7452012 7452077 -112832235 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 641 223 259 18 0 chr13 7452225 7452337 -112831975 + (TG)n Simple_repeat Simple_repeat 2 115 0 6 641 625 309 55 58 chr13 7452378 7452670 -112831642 - B4 SINE B4 0 292 2 6 641 215 160 19 39 chr13 7453481 7453533 -112830779 + T-rich Low_complexity Low_complexity 3 53 0 6 641 357 43 0 0 chr13 7455683 7455730 -112828582 + (CAAT)n Simple_repeat Simple_repeat 1 47 0 6 641 416 321 88 70 chr13 7455743 7456102 -112828210 + ORR1E LTR MaLR 18 370 0 6 641 438 108 0 0 chr13 7456206 7456271 -112828041 + (TG)n Simple_repeat Simple_repeat 1 65 0 6 641 21 57 0 0 chr13 7457095 7457130 -112827182 + AT_rich Low_complexity Low_complexity 1 35 0 6 641 372 22 0 0 chr13 7457400 7457445 -112826867 + (CATA)n Simple_repeat Simple_repeat 4 48 0 6 641 348 24 0 0 chr13 7457447 7457488 -112826824 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 641 216 299 0 29 chr13 7458184 7458253 -112826059 + G-rich Low_complexity Low_complexity 3 69 0 6 641 389 206 0 10 chr13 7458283 7458386 -112825926 + GA-rich Low_complexity Low_complexity 1 102 0 6 641 7461 50 12 1 chr13 7459020 7460355 -112823957 - L1Md_F2 LINE L1 0 6582 5294 6 641 3845 64 2 0 chr13 7460355 7460842 -112823470 - L1Md_F2 LINE L1 0 6582 6095 6 641 6124 52 12 0 chr13 7460842 7461054 -112823258 - L1Md_F2 LINE L1 -590 5293 5072 6 641 3690 66 0 4 chr13 7461053 7461552 -112822760 - L1Md_F2 LINE L1 -209 6373 5877 6 641 978 293 49 54 chr13 7462182 7462532 -112821780 + MTE2a LTR MaLR 32 379 0 6 641 22 35 0 0 chr13 7462823 7462852 -112821460 + AT_rich Low_complexity Low_complexity 1 29 0 6 641 222 238 17 44 chr13 7463000 7463009 -112821303 + (TATG)n Simple_repeat Simple_repeat 4 12 0 6 641 243 0 0 0 chr13 7463009 7463036 -112821276 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 641 222 238 17 44 chr13 7463036 7463206 -112821106 + (TATG)n Simple_repeat Simple_repeat 3 167 0 6 641 1574 217 69 3 chr13 7463708 7464068 -112820244 + ORR1C2 LTR MaLR 1 384 0 6 641 412 297 77 33 chr13 7464170 7464351 -112819961 - Lx8 LINE L1 -543 6930 6742 6 641 340 129 65 0 chr13 7464403 7464465 -112819847 - B3 SINE B2 0 216 151 6 641 241 267 31 55 chr13 7464687 7464814 -112819498 - Lx7 LINE L1 -8 7688 7565 6 641 462 18 0 0 chr13 7464917 7464972 -112819340 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 641 261 315 142 56 chr13 7464996 7465356 -112818956 + Lx8 LINE L1 7075 7465 -8 6 641 189 171 0 0 chr13 7465811 7465846 -112818466 + (TATG)n Simple_repeat Simple_repeat 4 38 0 6 641 346 302 32 40 chr13 7467543 7467667 -112816645 + B4 SINE B4 1 123 -169 6 641 801 276 3 45 chr13 7467787 7468069 -112816243 + Lx9 LINE L1 6835 7173 -471 6 641 238 132 0 36 chr13 7468159 7468214 -112816098 + GA-rich Low_complexity Low_complexity 3 55 0 6 641 1229 70 0 11 chr13 7468228 7468402 -112815910 + (GGA)n Simple_repeat Simple_repeat 3 174 0 6 641 1186 275 95 22 chr13 7468407 7468868 -112815444 + Lx6 LINE L1 6937 7431 -29 6 641 360 0 0 0 chr13 7468908 7468948 -112815364 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 641 642 126 0 0 chr13 7469016 7469119 -112815193 + (TA)n Simple_repeat Simple_repeat 2 104 0 6 641 23 33 0 0 chr13 7469273 7469303 -112815009 + AT_rich Low_complexity Low_complexity 1 30 0 6 641 217 347 21 21 chr13 7470601 7470698 -112813614 + L3 LINE CR1 3267 3363 -1126 6 642 23 92 0 0 chr13 7471216 7471281 -112813031 + AT_rich Low_complexity Low_complexity 1 65 0 6 642 383 38 19 0 chr13 7471404 7471457 -112812855 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 642 246 312 12 70 chr13 7471468 7471554 -112812758 - B3A SINE B2 -116 82 2 6 642 559 235 8 34 chr13 7471867 7471986 -112812326 + RSINE1 SINE B4 13 128 -37 6 642 339 25 0 0 chr13 7471999 7472039 -112812273 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 642 487 310 19 58 chr13 7472677 7472831 -112811481 + MTEa LTR MaLR 3 150 -229 6 642 1819 219 72 55 chr13 7472848 7472885 -112811427 - RLTR20B3 LTR ERVK -56 521 485 6 642 180 111 0 0 chr13 7472885 7472912 -112811400 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 6 642 492 89 0 0 chr13 7472912 7472990 -112811322 + (CA)n Simple_repeat Simple_repeat 2 80 0 6 642 1819 219 72 55 chr13 7472990 7473305 -112811007 - RLTR20B3 LTR ERVK -93 484 176 6 642 279 0 0 0 chr13 7473305 7473336 -112810976 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 642 1819 219 72 55 chr13 7473336 7473493 -112810819 - RLTR20B3 LTR ERVK -402 175 2 6 642 234 324 36 27 chr13 7473529 7473640 -112810672 + MTEa LTR MaLR 246 357 -22 6 642 245 336 80 51 chr13 7473665 7473803 -112810509 + MER31B LTR ERV1 62 203 -263 6 642 312 27 0 0 chr13 7473852 7473889 -112810423 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 642 830 101 203 0 chr13 7474668 7474816 -112809496 + B2_Mm1t SINE B2 2 179 -14 6 642 313 254 63 63 chr13 7475067 7475193 -112809119 - MamRep605 Unknown Unknown -638 238 113 6 642 215 291 25 12 chr13 7475331 7475411 -112808901 + MIRc SINE MIR 171 251 -17 6 642 822 161 0 0 chr13 7475580 7475754 -112808558 + (CATATA)n Simple_repeat Simple_repeat 1 174 0 6 642 4167 111 41 8 chr13 7477249 7477901 -112806411 - Lx3_Mus LINE L1 -8 7001 6328 6 642 8608 65 0 6 chr13 7477901 7479064 -112805248 + L1Md_F2 LINE L1 4431 5586 -297 6 642 7835 50 20 0 chr13 7479065 7480029 -112804283 + L1Md_F2 LINE L1 5588 6570 -12 6 642 1083 246 45 11 chr13 7480708 7481092 -112803220 - Lx6 LINE L1 0 7696 7050 6 642 2073 203 12 2 chr13 7481112 7481532 -112802780 - Lx6 LINE L1 -537 6923 6500 6 642 26 38 0 36 chr13 7481628 7481656 -112802656 + AT_rich Low_complexity Low_complexity 1 28 0 6 642 1117 75 0 0 chr13 7481656 7481803 -112802509 - B1_Mus2 SINE Alu 0 147 1 6 642 26 38 0 36 chr13 7481803 7481829 -112802483 + AT_rich Low_complexity Low_complexity 1 25 0 6 642 459 0 0 0 chr13 7481856 7481907 -112802405 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 6 642 613 188 0 0 chr13 7481938 7482039 -112802273 - B2_Mm2 SINE B2 -91 104 4 6 642 434 75 0 15 chr13 7483891 7483959 -112800353 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 6 642 213 39 0 0 chr13 7484056 7484082 -112800230 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 642 2322 246 186 18 chr13 7484428 7485261 -112799051 + RMER1C Other Other 406 1340 -2 6 642 341 204 30 20 chr13 7486265 7486365 -112797947 - Lx7 LINE L1 -164 7532 7432 6 642 211 174 46 11 chr13 7486580 7486667 -112797645 + (TA)n Simple_repeat Simple_repeat 1 90 0 6 642 2700 59 59 0 chr13 7486669 7487008 -112797304 - RLTR10D LTR ERVK 0 359 1 6 642 5875 100 0 34 chr13 7487008 7487909 -112796403 - IAP-d-int LTR ERVK 0 6542 5673 6 642 1894 196 18 13 chr13 7487896 7488289 -112796023 - IAP-d-int LTR ERVK -1160 5382 4988 6 642 711 229 0 0 chr13 7488274 7488431 -112795881 - IAP-d-int LTR ERVK -6039 503 347 6 642 1953 164 0 3 chr13 7488442 7488754 -112795558 - RLTR10E LTR ERVK 0 311 1 6 642 729 111 15 73 chr13 7488765 7488901 -112795411 - IAP-d-int LTR ERVK -6412 130 3 6 642 2586 80 59 0 chr13 7488903 7489242 -112795070 - RLTR10D LTR ERVK 0 359 1 6 642 227 282 7 90 chr13 7489242 7489386 -112794926 - Lx6 LINE L1 -36 7424 7293 6 642 599 207 0 0 chr13 7489415 7489531 -112794781 - Lx6 LINE L1 -1120 6340 6225 6 642 1768 218 36 12 chr13 7489533 7489951 -112794361 + Lx6 LINE L1 6333 6760 -700 6 642 633 224 183 50 chr13 7489951 7490191 -112794121 - RLTR10A LTR ERVK 0 411 140 6 642 907 155 12 0 chr13 7490246 7490407 -112793905 + Lx7 LINE L1 6768 6930 -766 6 642 1610 281 56 11 chr13 7490406 7490849 -112793463 + Lx6 LINE L1 6996 7458 -2 6 642 641 346 12 3 chr13 7490903 7491225 -112793087 - Lx8 LINE L1 -262 7211 6887 6 642 390 91 0 0 chr13 7491383 7491438 -112792874 + (TTCC)n Simple_repeat Simple_repeat 3 57 0 6 642 1586 120 12 44 chr13 7491438 7491758 -112792554 - Lx2 LINE L1 0 6997 6580 6 642 378 0 0 0 chr13 7492004 7492046 -112792266 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 642 242 371 7 114 chr13 7492369 7492518 -112791794 - MLT1J LTR MaLR -280 232 100 6 642 1059 205 36 18 chr13 7492691 7492915 -112791397 - RLTR40 LTR ERVK 0 817 590 6 642 2954 174 44 25 chr13 7493070 7493667 -112790645 - RLTR40 LTR ERVK -206 611 4 6 642 5102 114 16 7 chr13 7493904 7494674 -112789638 + Lx3A LINE L1 6199 6975 -6 6 642 32 43 0 0 chr13 7494675 7494721 -112789591 + AT_rich Low_complexity Low_complexity 1 46 0 6 642 426 20 0 0 chr13 7495695 7495746 -112788566 + (TC)n Simple_repeat Simple_repeat 1 51 0 6 642 486 342 64 16 chr13 7496159 7496171 -112788141 - B3A SINE B2 -1 197 186 6 642 375 60 0 0 chr13 7496171 7496221 -112788091 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 642 486 342 64 16 chr13 7496221 7496395 -112787917 - B3A SINE B2 -13 185 3 6 642 275 174 121 10 chr13 7496473 7496572 -112787740 - Lx9 LINE L1 -2 7642 7533 6 642 312 312 104 0 chr13 7496801 7496897 -112787415 - B1F1 SINE Alu -11 106 1 6 642 305 313 113 0 chr13 7497903 7498018 -112786294 - ORR1E LTR MaLR 0 379 252 6 642 237 189 35 18 chr13 7498101 7498214 -112786098 + (CAGAGA)n Simple_repeat Simple_repeat 4 118 0 6 642 302 0 26 0 chr13 7498276 7498314 -112785998 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 642 927 90 0 0 chr13 7498314 7498457 -112785855 + (GA)n Simple_repeat Simple_repeat 2 145 0 6 642 1021 65 58 0 chr13 7498487 7498625 -112785687 + B1_Mm SINE Alu 2 147 0 6 642 346 261 99 92 chr13 7498673 7498804 -112785508 - ORR1E LTR MaLR -225 134 3 6 642 978 182 4 76 chr13 7500000 7500238 -112784074 - L1_Mur3 LINE L1 -2997 2883 2663 1 642 792 125 0 0 chr13 7500239 7500367 -112783945 + (TCCC)n Simple_repeat Simple_repeat 1 128 0 2 642 405 0 0 0 chr13 7500370 7500415 -112783897 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 642 374 205 26 0 chr13 7500417 7500495 -112783817 - L1_Mur3 LINE L1 -3240 2640 2561 1 642 374 247 11 124 chr13 7500512 7500697 -112783615 + L1_Mur3 LINE L1 3267 3430 -2450 4 642 1372 210 18 41 chr13 7500715 7501053 -112783259 - L1_Mur3 LINE L1 -3337 2543 2214 1 642 879 113 0 0 chr13 7501053 7501186 -112783126 - L1_Mur3 LINE L1 -3930 1950 1818 1 642 7280 28 10 8 chr13 7501186 7502063 -112782249 + L1Md_T LINE L1 5704 6582 0 5 642 613 230 7 0 chr13 7502063 7502077 -112782235 - L1_Mur3 LINE L1 -4063 1814 1801 1 642 375 195 138 0 chr13 7502066 7502189 -112782123 + L1_Mur3 LINE L1 1679 1818 -4062 1 642 721 266 19 19 chr13 7502346 7502503 -112781809 - RSINE1 SINE B4 -6 159 3 6 642 292 312 21 52 chr13 7503068 7503089 -112781223 + ID_B1 SINE B4 80 177 -47 7 642 421 253 0 11 chr13 7503089 7503177 -112781135 + B1F2 SINE Alu 13 99 -50 8 642 29 47 0 0 chr13 7503346 7503389 -112780923 + AT_rich Low_complexity Low_complexity 1 43 0 9 642 299 281 18 0 chr13 7503595 7503709 -112780603 + CT-rich Low_complexity Low_complexity 1 116 0 1 642 741 53 0 0 chr13 7503826 7503920 -112780392 + (TTCTG)n Simple_repeat Simple_repeat 4 97 0 1 642 423 0 0 0 chr13 7504426 7504473 -112779839 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 642 1046 109 0 0 chr13 7504532 7504670 -112779642 - B1_Mus1 SINE Alu -10 138 1 1 642 863 279 79 9 chr13 7504670 7504898 -112779414 - B4 SINE B4 -41 251 8 1 642 229 262 30 15 chr13 7506644 7506710 -112777602 + ID4_ SINE ID 7 73 -10 1 642 241 179 17 51 chr13 7507212 7507271 -112777041 + GA-rich Low_complexity Low_complexity 1 57 0 1 642 21 0 0 0 chr13 7507685 7507706 -112776606 + AT_rich Low_complexity Low_complexity 1 21 0 1 642 288 367 101 0 chr13 7508733 7508842 -112775470 - RSINE1 SINE B4 -40 125 6 1 642 563 292 77 13 chr13 7509423 7509579 -112774733 - ID_B1 SINE B4 -58 166 1 1 642 5037 188 52 10 chr13 7510813 7511802 -112772510 + Lx5 LINE L1 6018 7047 -3 2 642 476 277 50 69 chr13 7511840 7512042 -112772270 - B3A SINE B2 0 198 1 2 642 470 303 0 0 chr13 7513213 7513335 -112770977 - B1F SINE Alu -19 130 9 2 642 251 239 11 54 chr13 7513285 7513378 -112770934 + YREP_Mm Unknown Unknown 259 347 -1465 2 642 22 0 0 0 chr13 7514020 7514042 -112770270 + AT_rich Low_complexity Low_complexity 1 22 0 2 642 524 101 0 0 chr13 7515194 7515263 -112769049 + ETnERV2-int LTR ERVK 4864 4932 -2474 2 642 476 283 127 49 chr13 7515974 7516424 -112767888 + L1MEc LINE L1 584 1068 -5332 2 642 462 219 6 24 chr13 7516465 7516633 -112767679 + (TA)n Simple_repeat Simple_repeat 2 166 0 2 642 260 286 195 47 chr13 7516658 7516827 -112767485 - MLT1A0 LTR MaLR -3 362 169 2 642 210 381 42 25 chr13 7517648 7517833 -112766479 + MIRb SINE MIR 9 199 -69 2 642 627 283 106 109 chr13 7518337 7518694 -112765618 - ORR1E LTR MaLR -3 356 1 3 642 537 289 111 0 chr13 7519328 7519518 -112764794 - ID_B1 SINE B4 -10 214 4 3 642 457 184 18 0 chr13 7519669 7519783 -112764529 + (TA)n Simple_repeat Simple_repeat 2 117 0 3 642 567 217 21 0 chr13 7521836 7521947 -112762365 - B1_Mus2 SINE Alu -3 124 2 3 642 24 0 0 0 chr13 7521955 7521979 -112762333 + AT_rich Low_complexity Low_complexity 1 24 0 3 642 819 265 76 29 chr13 7522856 7523132 -112761180 + B4 SINE B4 2 290 -2 3 642 4394 147 193 35 chr13 7523233 7524184 -112760128 + RLTR25A LTR ERVK 1 1101 -2 3 642 512 333 31 9 chr13 7525123 7525350 -112758962 - Tigger5 DNA MER2_type -4 2402 2171 3 642 543 351 43 9 chr13 7525355 7525585 -112758727 - Tigger5 DNA MER2_type -2159 247 10 3 642 621 141 0 0 chr13 7525648 7525747 -112758565 - L1VL4 LINE L1 -5977 325 227 3 642 4270 122 6 1 chr13 7525746 7526589 -112757723 + Lx2 LINE L1 5211 6061 -936 3 642 1779 253 67 101 chr13 7526589 7527294 -112757018 - RMER13B LTR ERVK -11 947 278 4 642 2309 85 0 57 chr13 7527294 7527644 -112756668 + L1_Mus2 LINE L1 6237 6566 0 4 642 738 313 59 159 chr13 7527644 7527655 -112756657 - RMER13B LTR ERVK -681 277 270 4 642 782 49 0 10 chr13 7527655 7527759 -112756553 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 4 642 1519 169 92 63 chr13 7527759 7528094 -112756218 - RMER13B LTR ERVK -563 345 1 4 642 2660 96 15 15 chr13 7528094 7528505 -112755807 + Lx2 LINE L1 6059 6469 -528 4 642 664 329 0 0 chr13 7529711 7529863 -112754449 + RSINE1 SINE B4 7 158 -7 4 642 275 235 105 105 chr13 7531995 7532109 -112752203 - RSINE1 SINE B4 -1 164 51 4 642 210 37 0 0 chr13 7532198 7532225 -112752087 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 642 286 322 11 11 chr13 7534932 7535023 -112749289 - B4A SINE B4 -200 92 2 4 642 22 0 0 0 chr13 7535070 7535092 -112749220 + AT_rich Low_complexity Low_complexity 1 22 0 4 642 946 275 50 102 chr13 7535261 7535730 -112748582 - Lx9 LINE L1 -179 7465 6878 5 642 879 231 70 131 chr13 7536590 7536983 -112747329 + RMER10A LTR ERVL 1 370 -72 5 642 3791 56 2 79 chr13 7536983 7537528 -112746784 + RLTR1C LTR ERV1 1 503 0 5 642 879 231 70 131 chr13 7537528 7537578 -112746734 + RMER10A LTR ERVL 371 417 -25 5 642 234 306 116 67 chr13 7537705 7537729 -112746583 + CYRA11_Mm Unknown Y-chromosome 149 183 -434 5 642 820 232 133 25 chr13 7537729 7537932 -112746380 - URR1B DNA MER1_type 0 225 1 5 642 950 228 98 4 chr13 7538088 7538313 -112745999 - RLTR17 LTR ERVK 0 692 447 5 642 389 71 71 12 chr13 7538742 7538827 -112745485 + T-rich Low_complexity Low_complexity 1 90 0 5 642 806 153 7 21 chr13 7539241 7539381 -112744931 - B1_Mur3 SINE Alu -6 143 6 5 642 376 219 78 92 chr13 7539262 7539403 -112744909 - MT2B LTR ERVL -323 278 140 5 642 279 94 29 93 chr13 7539482 7539622 -112744690 + A-rich Low_complexity Low_complexity 2 132 0 5 642 911 239 5 50 chr13 7539633 7539853 -112744459 + B3 SINE B2 2 211 -5 6 642 241 338 89 42 chr13 7540052 7540503 -112743809 - L1MC LINE L1 -1940 5845 5374 6 642 198 143 0 0 chr13 7540560 7540595 -112743717 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 642 260 167 21 0 chr13 7540605 7540653 -112743659 + MTD LTR MaLR 20 68 -353 6 642 258 108 12 75 chr13 7540663 7540743 -112743569 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 6 642 908 274 63 28 chr13 7540779 7541034 -112743278 + MTD LTR MaLR 156 419 0 6 642 250 188 52 45 chr13 7541618 7541752 -112742560 + (TA)n Simple_repeat Simple_repeat 2 136 0 6 642 195 100 0 0 chr13 7543635 7543665 -112740647 + (CAT)n Simple_repeat Simple_repeat 3 32 0 6 642 213 39 0 0 chr13 7543810 7543836 -112740476 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 6 642 428 287 24 77 chr13 7543849 7544019 -112740293 - B3A SINE B2 -16 182 22 6 642 319 267 40 13 chr13 7544165 7544241 -112740071 - B4A SINE B4 -211 81 4 6 642 360 364 151 20 chr13 7545013 7545363 -112738949 + MLT1C LTR MaLR 1 396 -71 7 642 2302 152 5 26 chr13 7545589 7546007 -112738305 - RLTR9E LTR ERVK 0 409 1 7 642 327 294 0 0 chr13 7546548 7546616 -112737696 + RSINE1 SINE B4 7 74 -91 7 642 2289 227 67 89 chr13 7546620 7546922 -112737390 + RMER6D LTR ERVK 3 318 -402 7 642 4057 61 4 12 chr13 7546922 7547436 -112736876 - RLTR1B LTR ERV1 0 512 3 7 642 2289 227 67 89 chr13 7547436 7547453 -112736859 + RMER6D LTR ERVK 319 348 -372 7 642 503 16 16 0 chr13 7547453 7547517 -112736795 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 642 2289 227 67 89 chr13 7547517 7547930 -112736382 + RMER6D LTR ERVK 349 719 -1 7 642 262 284 53 26 chr13 7547937 7548013 -112736299 + RSINE1 SINE B4 78 155 -10 7 642 331 233 2 0 chr13 7549762 7549836 -112734476 - B3A SINE B2 -115 78 4 7 642 21 0 0 0 chr13 7550078 7550099 -112734213 + AT_rich Low_complexity Low_complexity 1 21 0 7 642 184 267 188 62 chr13 7550239 7550431 -112733881 - MIR SINE MIR -15 247 32 7 642 771 250 190 19 chr13 7550536 7550846 -112733466 + ORR1D2 LTR MaLR 5 367 -3 7 642 21 36 0 0 chr13 7550860 7550888 -112733424 + AT_rich Low_complexity Low_complexity 1 28 0 8 642 781 268 9 14 chr13 7552009 7552221 -112732091 + B3 SINE B2 1 211 -5 8 642 273 119 0 0 chr13 7552437 7552479 -112731833 + (TATG)n Simple_repeat Simple_repeat 1 42 0 8 642 805 319 77 44 chr13 7552542 7553217 -112731095 - L1MB3 LINE L1 -3 6180 5484 8 642 1213 34 0 0 chr13 7553269 7553415 -112730897 + B1_Mm SINE Alu 2 147 0 8 642 461 249 76 22 chr13 7553428 7553613 -112730699 - L1M4 LINE L1 -699 5475 5281 8 642 260 306 91 35 chr13 7553670 7553836 -112730476 + MLT1B LTR MaLR 1 160 -214 8 642 2711 228 59 32 chr13 7553836 7554290 -112730022 - Lx6 LINE L1 -16 7444 6985 8 642 3087 42 42 0 chr13 7554290 7554670 -112729642 + MTA_Mm LTR MaLR 1 396 0 8 642 2711 228 59 32 chr13 7554670 7554876 -112729436 - Lx6 LINE L1 -476 6984 6766 8 642 470 46 15 0 chr13 7554877 7554942 -112729370 + (TA)n Simple_repeat Simple_repeat 2 67 0 8 642 798 143 0 0 chr13 7555579 7555712 -112728600 + (TA)n Simple_repeat Simple_repeat 1 133 0 9 642 381 22 0 0 chr13 7556354 7556400 -112727912 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 642 244 289 0 0 chr13 7556403 7556455 -112727857 - MER33 DNA MER1_type -251 73 22 9 642 28 0 0 0 chr13 7556660 7556688 -112727624 + AT_rich Low_complexity Low_complexity 1 28 0 9 642 620 292 97 16 chr13 7557451 7557850 -112726462 + L1MA4 LINE L1 5593 6013 -299 9 642 1645 237 37 17 chr13 7558128 7558531 -112725781 + MTD LTR MaLR 1 411 -8 9 642 679 233 37 19 chr13 7558565 7558742 -112725570 - B3 SINE B2 -23 170 1 9 642 188 150 0 32 chr13 7559491 7559553 -112724759 + (CAGA)n Simple_repeat Simple_repeat 3 62 0 9 642 277 361 84 7 chr13 7559728 7560024 -112724288 + L1MC3 LINE L1 6331 6649 -1136 9 642 230 185 56 0 chr13 7560217 7560271 -112724041 + L1MC3 LINE L1 6772 6828 -957 9 642 1382 184 75 26 chr13 7561243 7561549 -112722763 + Lx5 LINE L1 6727 7047 -3 9 642 3266 48 5 0 chr13 7561986 7562380 -112721932 + MTA_Mm LTR MaLR 1 396 0 1 642 916 222 71 0 chr13 7563161 7563359 -112720953 + B3 SINE B2 5 216 0 1 642 26007 158 21 15 chr13 7563604 7569851 -112714461 + L1_Mus4 LINE L1 412 6639 0 1 642 1492 0 0 22 chr13 7570203 7570385 -112713927 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 1 642 413 145 0 13 chr13 7570385 7570456 -112713856 + GA-rich Low_complexity Low_complexity 7 77 0 1 642 1221 106 0 0 chr13 7570457 7570637 -112713675 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 642 342 0 0 0 chr13 7570637 7570675 -112713637 + (GGGAGA)n Simple_repeat Simple_repeat 1 38 0 1 642 665 325 40 55 chr13 7570680 7571006 -112713306 + Lx8 LINE L1 6431 6751 -722 1 642 662 246 62 48 chr13 7571017 7571226 -112713086 + Lx8 LINE L1 6808 7019 -454 1 642 21 36 0 0 chr13 7571702 7571730 -112712582 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 631 358 38 58 chr13 7572271 7572562 -112711750 + B4A SINE B4 3 287 -5 1 642 5324 97 10 82 chr13 7573391 7574348 -112709964 - RMER17D LTR ERVK 0 889 1 1 642 289 223 225 13 chr13 7574422 7574649 -112709663 + L1MC1 LINE L1 5256 5530 -2255 1 642 33924 75 2 4 chr13 7574767 7580952 -112703360 - L1Md_F2 LINE L1 -12 6570 398 1 642 521 307 43 43 chr13 7580966 7581245 -112703067 + L1MC1 LINE L1 5659 5937 -396 1 642 350 346 105 58 chr13 7581500 7581672 -112702640 - B4A SINE B4 -111 181 2 1 642 1154 76 0 0 chr13 7581744 7581889 -112702423 + B1_Mm SINE Alu 3 147 0 1 642 216 0 0 0 chr13 7581889 7581913 -112702399 + (A)n Simple_repeat Simple_repeat 1 24 0 1 642 310 173 840 0 chr13 7582469 7582588 -112701724 - Lx9 LINE L1 -1 7643 7425 1 642 1222 235 4 0 chr13 7582604 7582847 -112701465 - Lx9 LINE L1 -772 6872 6629 1 642 2423 115 95 12 chr13 7584769 7585186 -112699126 - Lx3_Mus LINE L1 -648 6361 5909 1 642 252 0 0 0 chr13 7585186 7585214 -112699098 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 642 2423 115 95 12 chr13 7585214 7585228 -112699084 - Lx3_Mus LINE L1 -1101 5908 5895 1 642 3988 121 25 8 chr13 7585228 7585830 -112698482 + Lx3A LINE L1 6347 6958 -23 1 642 543 31 0 0 chr13 7585830 7585895 -112698417 + (TAGA)n Simple_repeat Simple_repeat 4 68 0 1 642 501 104 0 0 chr13 7585957 7586034 -112698278 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 642 463 307 167 24 chr13 7586069 7586279 -112698033 - B4A SINE B4 -7 285 46 1 642 30 0 0 0 chr13 7587046 7587076 -112697236 + AT_rich Low_complexity Low_complexity 1 30 0 1 642 209 354 83 0 chr13 7587268 7587364 -112696948 + L2a LINE L2 3322 3425 -1 1 642 419 353 82 18 chr13 7587647 7587817 -112696495 - ID_B1 SINE B4 0 224 44 1 642 336 307 64 45 chr13 7588419 7588576 -112695736 - RSINE1 SINE B4 -4 161 2 1 642 380 289 21 49 chr13 7590304 7590446 -112693866 - RMER30 DNA MER1_type -31 171 34 1 642 3023 168 37 7 chr13 7590448 7591013 -112693299 - Lx4B LINE L1 -888 6170 5589 1 642 1340 80 37 21 chr13 7591032 7591223 -112693089 - B2_Mm2 SINE B2 0 195 2 1 642 6937 91 11 10 chr13 7591356 7592357 -112691955 + L1_Mus1 LINE L1 5588 6565 -2 1 642 6394 70 6 3 chr13 7592370 7593216 -112691096 + L1_Mus3 LINE L1 5783 6630 -8 1 642 21 36 0 0 chr13 7593233 7593261 -112691051 + AT_rich Low_complexity Low_complexity 1 28 0 1 642 669 240 35 25 chr13 7593398 7593588 -112690724 + URR1B DNA MER1_type 5 219 -6 1 642 460 321 37 0 chr13 7595333 7595467 -112688845 - B4 SINE B4 -31 261 123 1 642 577 38 25 0 chr13 7595677 7595757 -112688555 + (GA)n Simple_repeat Simple_repeat 2 83 0 1 642 203 175 0 0 chr13 7595863 7595903 -112688409 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 642 37 90 0 0 chr13 7596031 7596131 -112688181 + AT_rich Low_complexity Low_complexity 1 100 0 1 642 1403 186 127 30 chr13 7596367 7596705 -112687607 + ORR1C1 LTR MaLR 1 371 -7 1 642 1376 76 0 11 chr13 7596732 7596918 -112687394 + B2_Mm2 SINE B2 3 186 -9 1 642 574 258 125 12 chr13 7598390 7598558 -112685754 + ID_B1 SINE B4 31 218 -74 1 642 1216 41 0 0 chr13 7599387 7599534 -112684778 - B1_Mus2 SINE Alu 0 147 1 1 642 1109 89 7 0 chr13 7600095 7600241 -112684071 + B1_Mus2 SINE Alu 1 147 0 1 642 351 0 0 0 chr13 7600276 7600315 -112683997 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 1 642 474 342 64 15 chr13 7600475 7600739 -112683573 - RLTR23 LTR ERV1 -45 385 109 1 642 484 189 0 196 chr13 7600771 7600929 -112683383 - RLTR23 LTR ERV1 -296 134 8 1 642 2263 69 21 45 chr13 7601013 7601348 -112682964 - IAPLTR2b LTR ERVK 0 327 1 1 80 14574 50 4 8 chr13 7601348 7603158 -112681154 - IAPEz-int LTR ERVK 0 6481 4678 1 643 1898 87 8 0 chr13 7603176 7603428 -112680884 - IAPEz-int LTR ERVK -5183 2497 2244 1 643 942 67 0 0 chr13 7603423 7603542 -112680770 - IAPEz-int LTR ERVK -5004 1477 1359 1 643 4143 89 17 30 chr13 7603542 7604295 -112680017 - IAPEz-int LTR ERVK -5819 662 9 1 643 2250 84 15 45 chr13 7604296 7604633 -112679679 - IAPLTR2b LTR ERVK 0 327 1 1 643 270 0 0 0 chr13 7604756 7604786 -112679526 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 643 2435 227 39 20 chr13 7604906 7605445 -112678867 - Lx6 LINE L1 0 7460 6912 1 643 189 0 0 0 chr13 7605447 7605468 -112678844 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 643 408 40 0 0 chr13 7605468 7605517 -112678795 + (TA)n Simple_repeat Simple_repeat 1 50 0 1 643 369 0 0 0 chr13 7605517 7605557 -112678755 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 643 2013 249 18 61 chr13 7605557 7606112 -112678200 - Lx6 LINE L1 -851 6609 6079 1 643 5645 221 112 96 chr13 7606084 7607635 -112676677 - Lx6 LINE L1 -1490 5970 4200 1 643 1184 45 11 22 chr13 7607635 7607817 -112676495 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 643 5645 225 131 115 chr13 7607817 7607944 -112676368 - Lx6 LINE L1 -1678 4199 4129 1 643 779 93 0 0 chr13 7607944 7608051 -112676261 - B1_Mm SINE Alu 0 147 41 1 643 341 307 10 19 chr13 7607971 7608074 -112676238 - MT2B LTR ERVL -325 276 175 1 643 5645 225 131 115 chr13 7608074 7608160 -112676152 - Lx6 LINE L1 -1678 4128 4080 1 643 405 0 0 0 chr13 7608160 7608205 -112676107 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 643 5645 225 131 115 chr13 7608205 7608954 -112675358 - Lx6 LINE L1 -1798 4079 3282 1 643 352 109 16 0 chr13 7608953 7609017 -112675295 + L1_Mur3 LINE L1 3244 3308 -2572 1 643 3777 247 40 7 chr13 7609009 7609878 -112674434 + Lx6 LINE L1 6165 7062 -398 1 643 198 71 0 0 chr13 7609971 7609999 -112674313 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1 643 52 41 0 0 chr13 7610234 7610307 -112674005 + AT_rich Low_complexity Low_complexity 1 73 0 1 643 1073 102 0 0 chr13 7610572 7610719 -112673593 + B1_Mus1 SINE Alu 1 147 -1 1 643 196 77 0 49 chr13 7610749 7610790 -112673522 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 643 620 194 309 0 chr13 7612164 7612329 -112671983 - B3 SINE B2 0 216 1 1 643 1285 210 212 20 chr13 7612804 7613451 -112670861 + Lx9 LINE L1 6870 7641 -3 1 643 487 292 118 48 chr13 7613976 7614163 -112670149 - B3A SINE B2 -4 212 13 1 643 2711 119 10 2 chr13 7614552 7614956 -112669356 + MTB_Mm LTR MaLR 1 407 0 1 643 4252 155 58 17 chr13 7614959 7615773 -112668539 + MTB_Mm-int LTR MaLR 6 852 -406 1 643 391 296 0 0 chr13 7615790 7615888 -112668424 + T-rich Low_complexity Low_complexity 1 98 0 1 643 849 146 6 28 chr13 7615889 7616065 -112668247 + CT-rich Low_complexity Low_complexity 2 173 0 1 643 1420 80 0 0 chr13 7616094 7616281 -112668031 + L1_Mus2 LINE L1 6378 6564 -2 1 643 956 128 6 50 chr13 7616299 7616478 -112667834 + MTB_Mm-int LTR MaLR 837 1007 -91 1 643 304 144 41 2 chr13 7616478 7616551 -112667761 - RMER17D2 LTR ERVK 0 889 749 1 643 944 92 38 0 chr13 7617151 7617282 -112667030 + B1_Mus1 SINE Alu 1 136 -12 1 643 306 0 0 0 chr13 7617283 7617317 -112666995 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 643 3550 262 48 4 chr13 7617446 7618397 -112665915 - Lx5 LINE L1 -6 7044 6052 1 643 535 360 18 18 chr13 7618759 7618923 -112665389 - RSINE1 SINE B4 0 165 2 1 643 214 143 41 0 chr13 7620017 7620066 -112664246 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 643 31 0 0 0 chr13 7620171 7620202 -112664110 + AT_rich Low_complexity Low_complexity 1 31 0 1 643 22 0 0 0 chr13 7620274 7620296 -112664016 + AT_rich Low_complexity Low_complexity 1 22 0 1 643 399 366 16 0 chr13 7620628 7620751 -112663561 - ID_B1 SINE B4 -6 218 94 1 643 2268 133 23 84 chr13 7621330 7621758 -112662554 + RLTR9D LTR ERVK 1 402 -1 1 643 777 257 71 58 chr13 7621767 7622147 -112662165 + ETnERV2-int LTR ERVK 3 387 -2927 1 643 4816 125 70 63 chr13 7622168 7622912 -112661400 + ETnERV2-int LTR ERVK 1056 1808 -5598 1 643 294 29 0 0 chr13 7622912 7622947 -112661365 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 643 4816 125 70 63 chr13 7622947 7623224 -112661088 + ETnERV2-int LTR ERVK 1809 2085 -5321 1 643 22 0 0 0 chr13 7623271 7623293 -112661019 + GC_rich Low_complexity Low_complexity 1 22 0 1 643 437 146 9 88 chr13 7623311 7623424 -112660888 + MMETn-int LTR ERVK 1607 1710 -3134 1 643 2727 191 99 45 chr13 7623445 7623633 -112660679 - RLTR1B LTR ERV1 -74 531 321 1 643 198 0 0 0 chr13 7623633 7623655 -112660657 + (CTGGGG)n Simple_repeat Simple_repeat 1 22 0 1 643 2727 60 63 30 chr13 7623655 7623960 -112660352 - RLTR1B LTR ERV1 -192 320 2 1 643 4712 256 9 5 chr13 7623960 7625122 -112659190 - MMERGLN-int LTR ERV1 0 7556 6390 1 643 6343 213 2 8 chr13 7625689 7626998 -112657314 - MMERGLN-int LTR ERV1 -1908 5648 4347 1 643 15725 210 20 21 chr13 7627005 7630501 -112653811 - MMERGLN-int LTR ERV1 -3676 3880 245 1 643 2917 35 108 0 chr13 7630501 7630872 -112653440 - IAPLTR2a LTR ERVK 0 411 1 1 643 2179 96 152 27 chr13 7630872 7631060 -112653252 - MMERGLN-int LTR ERV1 -3055 244 3 1 643 1023 145 24 0 chr13 7631060 7631226 -112653086 - RLTR1B LTR ERV1 0 512 343 1 643 418 71 0 0 chr13 7631230 7631286 -112653026 - RLTR1B LTR ERV1 -102 410 355 1 643 4385 127 17 14 chr13 7631286 7632102 -112652210 + ETnERV2-int LTR ERVK 1995 3448 -3958 1 643 3929 230 41 57 chr13 7632437 7633149 -112651163 + ETnERV2-int LTR ERVK 2396 3099 -2307 1 643 3686 18 121 0 chr13 7633149 7633589 -112650723 + MT2_Mm LTR ERVL 1 493 0 1 643 5232 155 7 73 chr13 7633589 7634772 -112649540 + ETnERV2-int LTR ERVK 5398 6373 -1033 1 643 437 149 3 0 chr13 7634777 7634856 -112649456 + RLTR9F LTR ERVK 333 415 0 1 643 2382 92 84 88 chr13 7635110 7635587 -112648725 - IAPLTR2_Mm LTR ERVK 0 475 1 1 643 339 25 0 0 chr13 7636169 7636209 -112648103 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 643 3153 58 5 2 chr13 7636665 7637060 -112647252 + MTA_Mm LTR MaLR 1 396 0 1 643 256 77 0 37 chr13 7638702 7638756 -112645556 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 1 643 1094 109 0 13 chr13 7638757 7638906 -112645406 - B1_Mus1 SINE Alu 0 148 2 1 643 505 226 115 5 chr13 7639103 7639294 -112645018 + Lx9 LINE L1 7400 7611 -33 1 643 313 207 93 17 chr13 7639962 7640080 -112644232 - Lx9 LINE L1 -2 7642 7516 1 643 26 0 0 0 chr13 7640582 7640608 -112643704 + AT_rich Low_complexity Low_complexity 1 26 0 1 643 6898 95 8 1 chr13 7640618 7642196 -112642116 + L1_Mus1 LINE L1 4978 6566 -1 1 643 659 92 16 40 chr13 7642848 7642973 -112641339 + L1_Mus3 LINE L1 6510 6631 -7 1 643 511 270 97 143 chr13 7643069 7643185 -112641127 - RMER12 LTR ERVK -105 1217 1107 1 643 2187 127 5 67 chr13 7643185 7643426 -112640886 + Lx2 LINE L1 6612 6839 -158 2 643 2758 69 48 8 chr13 7643426 7643805 -112640507 + MTA_Mm LTR MaLR 3 396 0 2 643 2187 127 5 67 chr13 7643805 7643967 -112640345 + Lx2 LINE L1 6840 6990 -7 2 643 511 270 97 143 chr13 7643967 7644088 -112640224 - RMER12 LTR ERVK -216 1106 991 1 643 189 107 0 0 chr13 7644089 7644117 -112640195 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 643 3357 132 11 52 chr13 7644117 7644726 -112639586 - RMER12 LTR ERVK -434 888 305 1 643 488 59 15 0 chr13 7644962 7645030 -112639282 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 2 643 1553 257 45 84 chr13 7645081 7645302 -112639010 + Lx9 LINE L1 6328 6550 -1094 2 643 1092 63 7 27 chr13 7645302 7645448 -112638864 + B1_Mus1 SINE Alu 1 143 -5 2 643 1553 257 45 84 chr13 7645448 7645830 -112638482 + Lx9 LINE L1 6551 6907 -737 2 643 421 318 113 30 chr13 7645845 7646244 -112638068 - L1MD LINE L1 -1577 4569 4138 2 643 517 226 14 72 chr13 7646251 7646389 -112637923 + B3 SINE B2 6 135 -81 2 643 1989 252 37 58 chr13 7646486 7647065 -112637247 + Lx9 LINE L1 6893 7473 -171 2 643 465 50 0 0 chr13 7647065 7647125 -112637187 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 643 1989 252 37 58 chr13 7647125 7647247 -112637065 + Lx9 LINE L1 7474 7579 -65 2 643 3675 46 5 0 chr13 7647247 7647681 -112636631 - RLTR10C LTR ERVK 0 436 1 2 643 1989 252 37 58 chr13 7647681 7647737 -112636575 + Lx9 LINE L1 7580 7635 -9 2 643 912 19 0 0 chr13 7648485 7648591 -112635721 + (TG)n Simple_repeat Simple_repeat 2 107 0 2 643 518 289 83 28 chr13 7649111 7649510 -112634802 + L1MC1 LINE L1 4732 5152 -994 2 643 306 290 147 45 chr13 7649527 7649850 -112634462 + L1MC1 LINE L1 5290 5641 -692 2 643 555 292 98 53 chr13 7649877 7650441 -112633871 + L1MC1 LINE L1 5737 6325 -8 2 643 644 211 41 0 chr13 7650547 7650670 -112633642 + B3 SINE B2 1 128 -88 2 643 471 18 0 0 chr13 7650696 7650752 -112633560 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 643 25 0 0 0 chr13 7651264 7651289 -112633023 + AT_rich Low_complexity Low_complexity 1 25 0 2 643 365 212 0 9 chr13 7651296 7651410 -112632902 + (TG)n Simple_repeat Simple_repeat 1 113 0 2 643 367 277 42 108 chr13 7651410 7651576 -112632736 - RSINE1 SINE B4 0 165 11 2 643 213 39 0 0 chr13 7651801 7651827 -112632485 + (TGG)n Simple_repeat Simple_repeat 2 27 0 2 643 682 163 73 0 chr13 7651827 7651946 -112632366 + B1_Mus2 SINE Alu 12 139 -8 2 643 198 0 0 0 chr13 7651948 7651970 -112632342 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 2 643 297 295 19 9 chr13 7652199 7652305 -112632007 + (TATG)n Simple_repeat Simple_repeat 4 110 0 2 643 315 290 230 15 chr13 7653519 7653715 -112630597 + RMER15 LTR ERVL 336 573 -2 2 643 205 281 10 59 chr13 7654088 7654190 -112630122 + (TATATG)n Simple_repeat Simple_repeat 6 102 0 2 643 691 301 74 17 chr13 7654216 7654446 -112629866 - B4A SINE B4 -49 243 1 2 643 1151 70 0 0 chr13 7655364 7655506 -112628806 + B1_Mus1 SINE Alu 2 143 -5 2 643 618 286 27 59 chr13 7655527 7655713 -112628599 - B3A SINE B2 -16 182 3 2 643 374 316 107 68 chr13 7655834 7656160 -112628152 - MLT1A LTR MaLR -3 371 33 2 643 471 344 129 47 chr13 7657330 7657647 -112626665 - MTE-int LTR MaLR -457 1123 781 2 643 1011 115 0 0 chr13 7658458 7658615 -112625697 + (TCC)n Simple_repeat Simple_repeat 3 159 0 2 643 720 224 114 22 chr13 7658623 7658851 -112625461 - Lx6 LINE L1 -7 7453 7205 2 643 243 0 0 0 chr13 7658941 7658968 -112625344 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 643 1880 261 70 47 chr13 7660326 7660997 -112623315 + Lx7 LINE L1 6994 7681 -15 2 643 4064 79 60 3 chr13 7660997 7661583 -112622729 + L1_Mus3 LINE L1 6015 6633 -5 2 643 1880 261 70 47 chr13 7661583 7661598 -112622714 + Lx7 LINE L1 7682 7696 0 2 643 24 0 0 0 chr13 7661666 7661690 -112622622 + AT_rich Low_complexity Low_complexity 1 24 0 2 643 1108 101 0 0 chr13 7662433 7662582 -112621730 + B2_Mm2 SINE B2 6 154 -41 2 643 246 32 0 0 chr13 7662583 7662614 -112621698 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 643 21 0 0 0 chr13 7664897 7664918 -112619394 + AT_rich Low_complexity Low_complexity 1 21 0 2 643 33629 45 4 1 chr13 7664918 7670268 -112614044 - L1Md_F3 LINE L1 -16 6568 1203 2 643 4125 153 5 9 chr13 7670293 7671061 -112613251 + L1Md_A LINE L1 484 1208 -5519 2 643 25 31 0 0 chr13 7671279 7671311 -112613001 + AT_rich Low_complexity Low_complexity 1 32 0 2 643 2813 146 71 12 chr13 7671311 7671818 -112612494 - Lx4A LINE L1 0 7058 6522 2 643 3658 194 46 78 chr13 7672103 7672308 -112612004 - L1_Mur3 LINE L1 -3610 2270 2069 2 643 285 29 0 0 chr13 7672308 7672342 -112611970 + (TGG)n Simple_repeat Simple_repeat 1 34 0 2 643 3658 207 47 71 chr13 7672342 7673597 -112610715 - L1_Mur3 LINE L1 -3812 2068 859 2 643 879 342 42 16 chr13 7673619 7674047 -112610265 - L1_Mur3 LINE L1 -7194 534 96 2 643 278 267 77 42 chr13 7674061 7674229 -112610083 - L1MEc LINE L1 -5364 1036 863 2 643 231 36 0 0 chr13 7674419 7674447 -112609865 + (GA)n Simple_repeat Simple_repeat 1 28 0 2 643 432 0 0 0 chr13 7674501 7674549 -112609763 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 643 396 0 0 0 chr13 7674549 7674592 -112609720 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 643 26 0 0 0 chr13 7674771 7674797 -112609515 + AT_rich Low_complexity Low_complexity 1 26 0 2 643 557 231 7 0 chr13 7675072 7675219 -112609093 + (TA)n Simple_repeat Simple_repeat 1 148 0 2 643 494 295 111 1 chr13 7675261 7675588 -112608724 - L1MA5A LINE L1 -315 5869 5505 2 643 299 298 49 39 chr13 7675596 7675725 -112608587 - L1MA5A LINE L1 -1279 4864 4720 2 643 224 170 21 0 chr13 7676354 7676401 -112607911 + A-rich Low_complexity Low_complexity 5 52 0 2 643 461 264 38 47 chr13 7676735 7676946 -112607366 + Lx7 LINE L1 7210 7418 -278 2 643 2581 173 36 11 chr13 7677058 7677531 -112606781 + RLTR19 LTR ERVK 15 499 0 2 643 21 0 0 0 chr13 7677578 7677599 -112606713 + AT_rich Low_complexity Low_complexity 1 21 0 2 643 281 81 0 0 chr13 7677863 7677900 -112606412 + L1_Mur3 LINE L1 1830 1866 -4014 2 643 1471 169 8 27 chr13 7677902 7678158 -112606154 - RMER6D LTR ERVK -4 716 466 2 643 1520 123 13 9 chr13 7678156 7678386 -112605926 - RMER6D LTR ERVK -487 233 3 2 643 637 189 14 116 chr13 7678388 7678603 -112605709 + L1_Mur3 LINE L1 1857 2049 -3828 2 643 351 0 0 0 chr13 7678606 7678645 -112605667 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 643 1579 207 35 43 chr13 7678733 7679127 -112605185 - L1_Mur3 LINE L1 -3315 2562 2172 2 643 12035 185 30 27 chr13 7679122 7681521 -112602791 + L1_Mur3 LINE L1 2593 5008 -872 2 643 2258 163 10 0 chr13 7681521 7681908 -112602404 + Lx2 LINE L1 6606 6996 -1 2 643 12035 185 30 27 chr13 7681908 7682206 -112602106 + L1_Mur3 LINE L1 5009 5298 -582 2 643 3167 246 51 14 chr13 7682477 7683285 -112601027 - Lx2B LINE L1 0 7000 6163 2 643 355 127 36 0 chr13 7683289 7683344 -112600968 - Lx2A LINE L1 -1076 5932 5876 2 643 459 35 0 0 chr13 7683653 7683710 -112600602 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 643 908 246 5 0 chr13 7683737 7683948 -112600364 + B3 SINE B2 1 212 -4 2 643 186 43 0 0 chr13 7684687 7684710 -112599602 + (TTTTTG)n Simple_repeat Simple_repeat 6 28 0 2 643 291 54 0 0 chr13 7684850 7684887 -112599425 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 643 264 272 0 47 chr13 7685241 7685326 -112598986 + ID4_ SINE ID 2 82 -1 2 643 416 347 89 50 chr13 7686906 7687085 -112597227 - B4A SINE B4 0 292 107 2 643 237 300 63 53 chr13 7687076 7687171 -112597141 - B3A SINE B2 -102 96 1 2 643 207 0 0 0 chr13 7687205 7687228 -112597084 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2 643 292 282 0 0 chr13 7688068 7688139 -112596173 - ID_B1 SINE B4 -21 203 133 2 643 4230 46 2 4 chr13 7688321 7688844 -112595468 + L1Md_F2 LINE L1 6061 6582 0 2 643 227 261 11 32 chr13 7689067 7689162 -112595150 + (TATATG)n Simple_repeat Simple_repeat 1 93 0 2 643 1160 51 0 0 chr13 7689377 7689514 -112594798 + L1Md_F2 LINE L1 6321 6457 -125 2 643 29 60 0 0 chr13 7689550 7689600 -112594712 + AT_rich Low_complexity Low_complexity 1 50 0 2 643 268 282 127 0 chr13 7689631 7689741 -112594571 - B2_Mm2 SINE B2 -70 125 2 2 643 528 16 0 0 chr13 7691014 7691075 -112593237 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 643 376 169 26 0 chr13 7691585 7691662 -112592650 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 2 643 481 199 0 12 chr13 7691671 7691844 -112592468 + GA-rich Low_complexity Low_complexity 1 171 0 2 643 302 310 78 7 chr13 7692481 7692632 -112591680 + B3 SINE B2 24 186 -9 2 643 459 0 0 0 chr13 7695400 7695451 -112588861 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 643 260 210 0 0 chr13 7695961 7696023 -112588289 + T-rich Low_complexity Low_complexity 1 62 0 2 643 1074 44 0 0 chr13 7696048 7696184 -112588128 + (TTTC)n Simple_repeat Simple_repeat 3 138 0 2 643 711 127 167 0 chr13 7696193 7696319 -112587993 - B1_Mus2 SINE Alu 0 147 1 2 643 912 340 62 10 chr13 7696343 7696921 -112587391 + Lx8 LINE L1 6802 7464 -9 2 643 412 250 95 0 chr13 7696975 7697059 -112587253 + B4A SINE B4 198 289 -3 2 643 244 329 25 25 chr13 7697924 7698005 -112586307 - RSINE1 SINE B4 0 165 85 2 643 350 323 35 81 chr13 7698028 7698200 -112586112 - B4A SINE B4 -120 172 9 2 643 24 53 0 0 chr13 7698742 7698780 -112585532 + AT_rich Low_complexity Low_complexity 1 38 0 2 643 625 241 28 34 chr13 7698973 7699138 -112585174 - ORR1C2 LTR MaLR -14 405 251 2 643 250 230 40 26 chr13 7699160 7699236 -112585076 - ORR1C2 LTR MaLR -297 77 1 2 643 606 114 17 17 chr13 7699254 7699370 -112584942 + (TCTA)n Simple_repeat Simple_repeat 4 119 0 2 643 369 0 0 0 chr13 7699397 7699438 -112584874 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 643 287 351 39 8 chr13 7699886 7700015 -112584297 + Arthur1 DNA Tip100 10 142 -3805 2 643 226 303 71 0 chr13 7700213 7700312 -112584000 + Arthur1 DNA Tip100 3538 3643 -304 2 643 204 97 0 0 chr13 7700452 7700483 -112583829 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 643 23 33 0 0 chr13 7700943 7700973 -112583339 + AT_rich Low_complexity Low_complexity 1 30 0 2 643 238 309 21 0 chr13 7701624 7701721 -112582591 - Lx4B LINE L1 -20 7038 6940 2 643 513 349 32 11 chr13 7703205 7703393 -112580919 - ID_B1 SINE B4 -12 212 21 2 643 511 122 34 25 chr13 7703886 7704004 -112580308 + GA-rich Low_complexity Low_complexity 3 121 0 2 643 235 118 0 0 chr13 7704004 7704038 -112580274 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 2 643 335 294 70 75 chr13 7705663 7705862 -112578450 + B3A SINE B2 1 198 0 2 643 1384 84 0 10 chr13 7706423 7706615 -112577697 + B2_Mm2 SINE B2 2 191 -4 2 643 399 279 166 21 chr13 7709109 7709296 -112575016 - B3 SINE B2 0 216 3 2 643 290 256 26 0 chr13 7710112 7710190 -112574122 + PB1D10 SINE Alu 34 113 -4 3 643 779 218 14 0 chr13 7710274 7710421 -112573891 + B1_Mur4 SINE Alu 1 149 -1 3 643 228 164 18 35 chr13 7710427 7710484 -112573828 + (TAA)n Simple_repeat Simple_repeat 2 57 0 3 643 428 299 130 28 chr13 7710489 7710812 -112573500 - L1MC3 LINE L1 -173 7612 7257 3 643 449 227 90 7 chr13 7711371 7711526 -112572786 + L1MA9 LINE L1 5731 5898 -414 3 643 396 0 0 0 chr13 7711648 7711692 -112572620 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 643 336 335 75 28 chr13 7712093 7712348 -112571964 - L1MEd LINE L1 -5835 284 18 3 643 308 262 114 15 chr13 7712690 7712822 -112571490 - L1MEg LINE L1 -4125 1959 1815 3 643 1661 219 99 76 chr13 7712861 7712998 -112571314 + RLTR20B3 LTR ERVK 6 150 -427 3 643 207 0 0 0 chr13 7712998 7713021 -112571291 + (CAGAT)n Simple_repeat Simple_repeat 3 25 0 3 643 1661 213 108 65 chr13 7713021 7713367 -112570945 + RLTR20B3 LTR ERVK 151 503 -74 3 643 1318 13 0 0 chr13 7713367 7713516 -112570796 - MMVL30-int LTR ERV1 -3529 169 21 3 643 4694 43 2 24 chr13 7713516 7714134 -112570178 - RLTR6_Mm LTR ERV1 -50 604 1 3 643 1545 135 12 0 chr13 7714181 7714425 -112569887 - Lx2B LINE L1 -1031 5969 5723 3 643 448 153 12 12 chr13 7714422 7714508 -112569804 - Lx3C LINE L1 -1181 5795 5710 3 643 891 192 6 0 chr13 7714507 7714674 -112569638 + Lx4B LINE L1 6410 6577 -481 3 643 591 55 154 0 chr13 7714675 7714766 -112569546 + RLTR23 LTR ERV1 1 105 -325 3 643 433 68 0 26 chr13 7714781 7714857 -112569455 + (CAAAA)n Simple_repeat Simple_repeat 2 75 0 3 643 1626 119 144 25 chr13 7714895 7715179 -112569133 + RLTR23 LTR ERV1 104 421 -9 3 643 493 120 0 0 chr13 7715183 7715258 -112569054 + Lx2B LINE L1 6570 6644 -356 3 643 307 266 37 37 chr13 7715263 7715345 -112568967 + MT2B LTR ERVL 191 272 -329 3 643 2139 165 16 6 chr13 7715281 7715647 -112568665 + RLTR25A LTR ERVK 527 896 -207 3 643 41 0 0 0 chr13 7715780 7715821 -112568491 + AT_rich Low_complexity Low_complexity 1 41 0 3 643 849 292 30 5 chr13 7716300 7716503 -112567809 + B3 SINE B2 2 209 -7 3 643 423 0 0 0 chr13 7716815 7716862 -112567450 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 643 180 246 92 40 chr13 7716880 7716956 -112567356 - L2 LINE L2 -666 2753 2674 3 643 637 338 42 68 chr13 7716996 7717377 -112566935 + MLT1A LTR MaLR 1 371 -3 3 643 722 293 61 31 chr13 7718253 7718482 -112565830 - B4A SINE B4 -56 236 1 3 643 231 114 0 0 chr13 7718607 7718642 -112565670 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 3 643 362 360 108 19 chr13 7718699 7718957 -112565355 - B4A SINE B4 -10 282 2 3 643 21 0 0 0 chr13 7720111 7720132 -112564180 + AT_rich Low_complexity Low_complexity 1 21 0 3 643 220 370 25 100 chr13 7720299 7720419 -112563893 + PB1D10 SINE Alu 1 111 -6 3 643 185 243 14 0 chr13 7720423 7720493 -112563819 + GA-rich Low_complexity Low_complexity 3 73 0 3 643 1779 188 165 42 chr13 7720720 7721332 -112562980 + RMER6C LTR ERVK 1 687 -3 3 643 213 246 15 0 chr13 7722535 7722600 -112561712 + T-rich Low_complexity Low_complexity 2 67 0 3 643 414 0 0 0 chr13 7722724 7722770 -112561542 + (TA)n Simple_repeat Simple_repeat 1 46 0 3 643 21 57 0 0 chr13 7723690 7723725 -112560587 + AT_rich Low_complexity Low_complexity 1 35 0 3 643 4555 238 50 23 chr13 7724244 7724695 -112559617 + Lx7 LINE L1 6265 6749 -947 3 643 918 191 136 0 chr13 7724695 7724894 -112559418 - URR1A DNA MER1_type 0 226 1 3 643 4555 238 50 23 chr13 7724894 7725563 -112558749 + Lx7 LINE L1 6750 7415 -281 3 643 252 0 0 0 chr13 7725563 7725591 -112558721 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 643 382 279 25 0 chr13 7725635 7725757 -112558555 + Lx7 LINE L1 7550 7674 -22 3 643 577 352 0 27 chr13 7725786 7726005 -112558307 + B3 SINE B2 1 213 -3 3 643 5824 64 21 9 chr13 7726062 7726839 -112557473 - L1Md_F2 LINE L1 -13 6569 5784 3 643 16971 25 1 0 chr13 7726898 7728900 -112555412 + L1Md_A LINE L1 3582 5586 -297 3 643 8678 18 1 0 chr13 7728900 7729895 -112554417 + L1Md_A LINE L1 5587 6582 0 3 643 2580 17 0 0 chr13 7729895 7730187 -112554125 + L1Md_F2 LINE L1 5294 5585 -298 3 643 7953 51 5 0 chr13 7730188 7731177 -112553135 + L1Md_F2 LINE L1 5587 6580 -2 3 643 484 264 48 61 chr13 7731734 7731899 -112552413 - B3A SINE B2 -52 164 2 3 644 531 66 0 0 chr13 7733363 7733439 -112550873 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 644 1240 73 11 0 chr13 7734275 7734452 -112549860 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 3 644 198 0 0 0 chr13 7734452 7734474 -112549838 + (TTTC)n Simple_repeat Simple_repeat 3 24 0 3 644 194 91 73 0 chr13 7734872 7734927 -112549385 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 644 242 245 28 64 chr13 7735049 7735158 -112549154 + L1MD LINE L1 3056 3160 -2986 3 644 1747 235 15 31 chr13 7735570 7735961 -112548351 + MTD LTR MaLR 7 391 -28 3 644 34 24 0 0 chr13 7736454 7736495 -112547817 + AT_rich Low_complexity Low_complexity 1 41 0 3 644 338 337 145 44 chr13 7737318 7737635 -112546677 + L1M5 LINE L1 4265 4613 -1533 3 644 839 299 83 76 chr13 7737635 7737885 -112546427 + L1MA5 LINE L1 3696 3940 -2203 3 644 4006 151 93 4 chr13 7737885 7738603 -112545709 + Lx4A LINE L1 6277 7058 0 3 644 839 299 83 76 chr13 7738603 7739443 -112544869 + L1MA5 LINE L1 3941 4794 -1349 3 644 213 39 0 0 chr13 7739444 7739470 -112544842 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 644 250 325 85 28 chr13 7739484 7739801 -112544511 + L1MA5 LINE L1 4884 5218 -925 3 644 356 324 9 9 chr13 7740015 7740121 -112544191 - B4A SINE B4 -4 288 183 3 644 252 253 133 33 chr13 7740082 7740172 -112544140 - PB1D10 SINE Alu -6 111 13 3 644 217 303 89 38 chr13 7740132 7740211 -112544101 - B4A SINE B4 -154 138 56 3 644 466 254 100 67 chr13 7740221 7740381 -112543931 + L1MA5 LINE L1 5647 5825 -475 3 644 4737 98 7 1 chr13 7740381 7741057 -112543255 + L1_Mus3 LINE L1 5953 6632 -6 3 644 466 254 100 67 chr13 7741057 7741136 -112543176 + L1MA5 LINE L1 5826 5894 -406 3 644 696 74 0 0 chr13 7741685 7741780 -112542532 + (TG)n Simple_repeat Simple_repeat 2 96 0 3 644 204 286 18 0 chr13 7741780 7741836 -112542476 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 644 239 143 41 0 chr13 7741869 7741918 -112542394 + (CATA)n Simple_repeat Simple_repeat 2 52 0 3 644 651 265 73 11 chr13 7741918 7742114 -112542198 - B3A SINE B2 -13 203 2 3 644 1296 270 29 45 chr13 7742453 7742833 -112541479 + MTEb LTR MaLR 3 376 -3 3 644 23 78 0 0 chr13 7744365 7744416 -112539896 + AT_rich Low_complexity Low_complexity 1 51 0 3 644 328 377 38 11 chr13 7745973 7746158 -112538154 - Charlie22a DNA MER1_type -299 192 3 3 644 217 226 0 0 chr13 7746739 7746792 -112537520 + CT-rich Low_complexity Low_complexity 1 53 0 3 644 338 253 13 0 chr13 7747560 7747639 -112536673 + B3A SINE B2 1 80 -118 3 644 7566 135 59 22 chr13 7747641 7748809 -112535503 - Lx2 LINE L1 -36 6961 5734 3 644 1532 38 16 0 chr13 7748809 7748993 -112535319 - B2_Mm1a SINE B2 -6 187 1 3 644 7566 135 59 22 chr13 7748993 7749145 -112535167 - Lx2 LINE L1 -1264 5733 5592 3 644 649 237 29 7 chr13 7749148 7749288 -112535024 + B3 SINE B2 74 216 0 3 644 25 51 0 0 chr13 7750177 7750216 -112534096 + AT_rich Low_complexity Low_complexity 1 39 0 3 644 206 48 70 23 chr13 7750301 7750344 -112533968 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 644 423 0 0 0 chr13 7751143 7751190 -112533122 + (TTA)n Simple_repeat Simple_repeat 3 49 0 3 644 29202 111 7 30 chr13 7751306 7755983 -112528329 - L1_Mus1 LINE L1 -3 6567 2037 3 644 4240 21 2 0 chr13 7755983 7756464 -112527848 + LTRIS_Mm LTR ERV1 1 482 0 3 644 29202 158 42 32 chr13 7756464 7758466 -112525846 - L1_Mus1 LINE L1 -3850 2036 102 3 644 1812 160 10 0 chr13 7758490 7758802 -112525510 - Lx LINE L1 0 6654 6340 3 644 3392 18 0 0 chr13 7759658 7760051 -112524261 + MMETn-int LTR ERVK 446 838 -4006 3 644 30873 95 18 5 chr13 7760093 7763891 -112520421 + L1Md_F2 LINE L1 353 4195 -1688 3 644 414 0 0 0 chr13 7763891 7763937 -112520375 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 644 30873 86 4 7 chr13 7763937 7764469 -112519843 + L1Md_F2 LINE L1 4196 4733 -1150 3 644 239 0 32 0 chr13 7764469 7764500 -112519812 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 644 30873 86 4 7 chr13 7764500 7765355 -112518957 + L1Md_F2 LINE L1 4734 5583 -300 3 644 7374 77 5 4 chr13 7765357 7766350 -112517962 + L1Md_F2 LINE L1 5589 6582 0 3 644 1108 269 57 4 chr13 7766358 7766638 -112517674 - Lx6 LINE L1 -146 7314 7020 3 644 273 338 82 14 chr13 7766811 7766958 -112517354 - MLT1A LTR MaLR -8 366 210 3 644 344 192 220 35 chr13 7767761 7767934 -112516378 - Lx9 LINE L1 -22 7622 7418 3 644 3955 123 5 2 chr13 7768161 7768468 -112515844 - Lx LINE L1 -8 6646 6341 3 644 591 15 0 0 chr13 7768468 7768536 -112515776 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 644 3955 123 5 2 chr13 7768536 7768816 -112515496 - Lx LINE L1 -314 6340 6058 3 644 374 219 41 10 chr13 7769112 7769209 -112515103 - MTEa LTR MaLR -23 356 257 3 644 423 265 114 0 chr13 7770620 7770752 -112513560 - Lx6 LINE L1 -4 7456 7310 3 644 275 231 77 0 chr13 7770860 7770938 -112513374 - MTD LTR MaLR 0 419 336 3 644 1444 213 28 19 chr13 7770944 7771265 -112513047 - RMER15 LTR ERVL 0 575 252 3 644 2633 239 94 50 chr13 7771278 7772142 -112512170 - RMER19B LTR ERVK 0 902 1 3 644 1107 191 33 5 chr13 7772142 7772352 -112511960 - URR1B DNA MER1_type -8 217 2 3 644 1158 238 35 16 chr13 7772352 7772607 -112511705 - RMER15 LTR ERVL -314 261 2 3 644 789 289 36 24 chr13 7772612 7772860 -112511452 - MTD LTR MaLR -121 298 48 3 644 1629 163 10 20 chr13 7773556 7773856 -112510456 - Lx3_Mus LINE L1 -8 7001 6705 3 644 4618 119 51 3 chr13 7773856 7774581 -112509731 + Lx3_Mus LINE L1 5983 6742 -267 3 644 237 251 143 10 chr13 7774790 7774893 -112509419 + MTEb LTR MaLR 280 396 0 3 644 586 277 103 29 chr13 7775078 7775320 -112508992 + MT2A LTR ERVL 202 461 -72 3 644 221 351 142 5 chr13 7775799 7776011 -112508301 - L2 LINE L2 -1593 1826 1586 3 644 23 33 0 0 chr13 7777105 7777135 -112507177 + AT_rich Low_complexity Low_complexity 1 30 0 3 644 4191 188 38 6 chr13 7777784 7778647 -112505665 - L1_Mur2 LINE L1 -13 5864 4974 3 644 983 281 136 22 chr13 7778693 7779097 -112505215 + Lx6 LINE L1 5908 6357 -693 3 644 1322 326 52 21 chr13 7779099 7779656 -112504656 + Lx6 LINE L1 6506 7433 -27 3 644 790 290 56 24 chr13 7779738 7780201 -112504111 - L1MC1 LINE L1 -99 6234 5757 3 644 638 340 18 113 chr13 7780205 7780593 -112503719 + ORR1E LTR MaLR 3 353 -6 3 644 441 254 110 61 chr13 7780646 7780969 -112503343 - L1MC1 LINE L1 -473 5711 5345 3 644 369 0 0 0 chr13 7780973 7781014 -112503298 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 644 554 301 84 17 chr13 7781096 7781275 -112503037 - MTD LTR MaLR -228 191 1 3 644 300 314 95 23 chr13 7781319 7781583 -112502729 - L1MC1 LINE L1 -840 5306 5024 3 644 286 285 183 26 chr13 7781657 7781848 -112502464 - L1MC1 LINE L1 -1253 4893 4673 3 644 437 242 5 31 chr13 7781974 7782166 -112502146 - RMER17C LTR ERVK -136 274 88 4 644 927 138 0 0 chr13 7782439 7782591 -112501721 + (GAA)n Simple_repeat Simple_repeat 2 153 0 4 644 1308 284 27 14 chr13 7783083 7783497 -112500815 + MTD LTR MaLR 1 419 0 4 644 315 0 0 0 chr13 7784924 7784959 -112499353 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 644 1137 88 0 0 chr13 7785741 7785888 -112498424 + B1_Mus2 SINE Alu 1 147 0 4 644 209 57 29 0 chr13 7785889 7785924 -112498388 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 644 250 293 130 10 chr13 7785927 7786027 -112498285 - MLT1D LTR MaLR -55 450 339 4 644 503 284 44 15 chr13 7786027 7786163 -112498149 + MTE2b LTR MaLR 236 375 -4 4 644 259 341 70 47 chr13 7786277 7786449 -112497863 - MLT1D LTR MaLR -315 190 15 4 644 3030 93 2 2 chr13 7786508 7786929 -112497383 + BGLII LTR ERVK 1 421 0 4 644 1841 202 47 18 chr13 7788025 7788408 -112495904 + MTB_Mm LTR MaLR 14 407 0 4 644 280 284 81 40 chr13 7788899 7788998 -112495314 + B1F SINE Alu 40 142 -7 4 644 946 320 23 0 chr13 7789987 7790246 -112494066 + B4 SINE B4 3 267 -25 4 644 293 0 27 0 chr13 7790280 7790317 -112493995 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 644 3237 48 5 0 chr13 7790700 7791094 -112493218 - MTA_Mm LTR MaLR 0 396 1 4 644 1630 236 57 38 chr13 7791361 7791784 -112492528 + MT2A LTR ERVL 25 455 -78 4 644 477 251 85 8 chr13 7792226 7792357 -112491955 + B1_Mur4 SINE Alu 11 143 -7 4 644 440 261 90 19 chr13 7792671 7792884 -112491428 - MTD LTR MaLR -2 417 148 4 644 1458 232 136 28 chr13 7792885 7793311 -112491001 - RMER19C LTR ERVK -2 609 138 4 644 1473 245 33 9 chr13 7793632 7793966 -112490346 + MTD LTR MaLR 78 419 0 4 644 21 0 0 0 chr13 7794091 7794112 -112490200 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 23 33 0 0 chr13 7794337 7794367 -112489945 + AT_rich Low_complexity Low_complexity 1 30 0 4 644 229 382 31 42 chr13 7794655 7794846 -112489466 + B4A SINE B4 2 190 -102 4 644 308 178 0 14 chr13 7794853 7794927 -112489385 + A-rich Low_complexity Low_complexity 2 74 0 4 644 7297 60 1 30 chr13 7795468 7796440 -112487872 + L1Md_F2 LINE L1 5627 6570 -12 4 644 3344 251 44 36 chr13 7797714 7798691 -112485621 - Lx7 LINE L1 -825 6871 5887 4 644 230 250 0 0 chr13 7798951 7798999 -112485313 + (CATATA)n Simple_repeat Simple_repeat 4 51 0 4 644 229 241 140 86 chr13 7799081 7799267 -112485045 - RLTR12A LTR ERVK -2 566 371 4 644 216 0 0 0 chr13 7799959 7799983 -112484329 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 4 644 811 350 76 5 chr13 7800574 7800970 -112483342 + Lx8 LINE L1 6827 7250 -223 4 644 31 26 0 0 chr13 7801808 7801846 -112482466 + AT_rich Low_complexity Low_complexity 1 38 0 4 644 346 333 50 45 chr13 7802068 7802126 -112482186 - L1M4 LINE L1 -778 5368 5307 4 644 1967 214 2 19 chr13 7802126 7802554 -112481758 - MTC LTR MaLR 0 421 1 4 644 346 333 50 45 chr13 7802554 7802674 -112481638 - L1M4 LINE L1 -840 5306 5189 4 644 437 325 6 13 chr13 7802701 7802857 -112481455 + L1M2 LINE L1 4826 4980 -1163 4 644 22 35 0 0 chr13 7803205 7803234 -112481078 + AT_rich Low_complexity Low_complexity 1 29 0 4 644 259 226 99 57 chr13 7804680 7804821 -112479491 + L1M5 LINE L1 5667 5813 -349 4 644 209 108 0 26 chr13 7805038 7805076 -112479236 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 644 26 74 0 0 chr13 7805144 7805198 -112479114 + AT_rich Low_complexity Low_complexity 1 54 0 4 644 38014 42 0 3 chr13 7805233 7811453 -112472859 - L1Md_T LINE L1 0 6585 285 4 644 1351 245 141 22 chr13 7811455 7811901 -112472411 - RMER19C LTR ERVK -6 605 107 4 644 3004 71 2 12 chr13 7811908 7812307 -112472005 + MTB LTR MaLR 5 399 -1 4 644 17101 103 3 1 chr13 7812392 7815612 -112468700 + L1_Mus1 LINE L1 3340 6567 0 4 644 23 54 0 0 chr13 7815793 7815830 -112468482 + AT_rich Low_complexity Low_complexity 1 37 0 4 644 703 158 54 5 chr13 7815857 7815987 -112468325 + Lx2B LINE L1 6465 6582 -418 4 644 234 300 73 0 chr13 7816666 7816776 -112467536 + HAL1b LINE L1 1079 1196 -813 4 644 323 246 96 7 chr13 7817087 7817222 -112467090 + L1M5 LINE L1 3742 3888 -2258 4 644 404 320 112 34 chr13 7817286 7817464 -112466848 + B3A SINE B2 1 192 -6 4 644 312 271 58 91 chr13 7818353 7818591 -112465721 - MLT1D LTR MaLR 0 505 144 4 644 420 279 88 38 chr13 7820128 7820288 -112464024 - B3A SINE B2 -28 170 3 4 644 21 0 0 0 chr13 7821479 7821500 -112462812 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 7638 77 14 5 chr13 7821507 7823002 -112461310 - L1Md_F2 LINE L1 0 6582 5083 4 644 3786 73 63 0 chr13 7822999 7823522 -112460790 + L1Md_F2 LINE L1 4510 5065 -818 4 644 810 326 79 40 chr13 7823747 7824847 -112459465 + Lx8 LINE L1 4838 5923 -1550 4 644 533 307 53 19 chr13 7825321 7825527 -112458785 + B3 SINE B2 2 214 -2 4 644 951 104 52 0 chr13 7825549 7825656 -112458656 + B2_Mm2 SINE B2 1 109 -86 4 644 3217 192 35 16 chr13 7825656 7826335 -112457977 + RLTR17 LTR ERVK 1 692 0 4 644 951 104 52 0 chr13 7826335 7826381 -112457931 + B2_Mm2 SINE B2 110 160 -35 4 644 251 26 0 73 chr13 7826381 7826422 -112457890 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 4 644 1080 302 62 5 chr13 7826438 7826824 -112457488 + Lx8 LINE L1 6231 6638 -835 4 644 4705 156 27 5 chr13 7827208 7827990 -112456322 + L1VL2 LINE L1 62 860 -5475 4 644 399 246 209 16 chr13 7828035 7828267 -112456045 + RLTR10A LTR ERVK 135 411 0 4 644 434 174 61 52 chr13 7828286 7828401 -112455911 + RLTR10-int LTR ERVK 318 433 -1554 4 644 663 314 32 32 chr13 7828857 7829328 -112454984 + RLTR45-int LTR ERVK 3224 4055 -3526 4 644 1715 246 33 34 chr13 7829378 7830150 -112454162 + RLTR45-int LTR ERVK 6522 7042 -202 4 644 426 239 57 25 chr13 7830184 7830343 -112453969 + RLTR10A LTR ERVK 135 298 -113 4 644 371 197 15 0 chr13 7830350 7830416 -112453896 + RLTR45-int LTR ERVK 235 301 -1686 4 644 18372 153 23 7 chr13 7830416 7835800 -112448512 + L1_Mus4 LINE L1 1154 6630 -6 4 644 360 0 0 0 chr13 7836500 7836540 -112447772 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 4 644 295 265 0 24 chr13 7836541 7836626 -112447686 - MTD LTR MaLR -18 401 319 4 644 643 239 22 0 chr13 7836736 7836874 -112447438 - MTD LTR MaLR -84 335 195 4 644 609 160 89 103 chr13 7836882 7837028 -112447284 + RLTR17 LTR ERVK 549 692 0 4 644 311 343 84 53 chr13 7837999 7838224 -112446088 + ORR1E LTR MaLR 1 232 -127 4 644 2224 93 9 70 chr13 7838334 7838679 -112445633 + ORR1A2 LTR MaLR 1 324 -3 4 644 355 325 70 108 chr13 7838812 7839026 -112445286 + B3 SINE B2 11 216 0 4 644 242 256 10 100 chr13 7839455 7839569 -112444743 - MLT1H-int LTR MaLR -273 1136 1026 4 644 314 171 14 0 chr13 7839780 7839850 -112444462 + CT-rich Low_complexity Low_complexity 2 72 0 4 644 244 332 93 61 chr13 7839937 7840216 -112444096 - MLT1H-int LTR MaLR -903 506 219 4 644 22 0 0 0 chr13 7840336 7840358 -112443954 + AT_rich Low_complexity Low_complexity 1 22 0 4 644 261 0 0 0 chr13 7841192 7841221 -112443091 + (T)n Simple_repeat Simple_repeat 1 29 0 4 644 1300 32 0 0 chr13 7841239 7841397 -112442915 - L1_Mus2 LINE L1 0 6566 6409 4 644 3031 45 0 5 chr13 7841495 7841876 -112442436 - L1Md_F2 LINE L1 -12 6570 6192 4 644 21 0 0 0 chr13 7842218 7842239 -112442073 + AT_rich Low_complexity Low_complexity 1 21 0 4 644 561 358 23 0 chr13 7843180 7843353 -112440959 + B4 SINE B4 2 178 -114 4 644 202 208 0 0 chr13 7843374 7843427 -112440885 + A-rich Low_complexity Low_complexity 1 53 0 4 644 1289 43 0 0 chr13 7844179 7844340 -112439972 + L1Md_T LINE L1 6421 6581 -1 4 644 246 316 105 0 chr13 7845547 7845623 -112438689 + B4 SINE B4 198 281 -11 4 644 321 140 0 0 chr13 7846046 7846103 -112438209 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 644 22 0 0 0 chr13 7846817 7846839 -112437473 + AT_rich Low_complexity Low_complexity 1 22 0 4 644 621 40 0 0 chr13 7847852 7847928 -112436384 + (TATG)n Simple_repeat Simple_repeat 1 76 0 4 644 1698 296 17 8 chr13 7848820 7849294 -112435018 - Lx6 LINE L1 -1 7459 6982 4 644 1182 148 0 25 chr13 7849294 7849495 -112434817 + MTB LTR MaLR 1 196 -204 4 644 9275 86 5 4 chr13 7849495 7850790 -112433522 - L1_Mus1 LINE L1 -1286 4597 3302 4 644 8618 109 7 1 chr13 7850780 7852448 -112431864 + L1_Mus1 LINE L1 4605 6284 -283 4 644 268 242 0 0 chr13 7852441 7852503 -112431809 + L1_Mm LINE L1 3477 3538 -2345 4 644 288 0 0 0 chr13 7852505 7852537 -112431775 + (A)n Simple_repeat Simple_repeat 1 32 0 4 644 1226 87 138 0 chr13 7852537 7852731 -112431581 + MTB LTR MaLR 181 401 -6 4 644 3864 181 86 28 chr13 7852731 7854487 -112429825 + MTB-int LTR MaLR 2 1538 -425 4 644 2284 109 93 3 chr13 7854487 7854854 -112429458 + MTB LTR MaLR 1 400 0 4 644 3218 211 6 46 chr13 7854854 7855556 -112428756 - Lx6 LINE L1 -699 6997 6302 4 644 261 0 0 0 chr13 7855565 7855594 -112428718 + (TTA)n Simple_repeat Simple_repeat 2 30 0 4 644 666 143 18 9 chr13 7855594 7855697 -112428615 - B1_Mus1 SINE Alu -9 139 35 4 644 2963 240 29 140 chr13 7855697 7855932 -112428380 - Lx6 LINE L1 -1395 6301 6065 4 644 25 31 0 0 chr13 7856059 7856091 -112428221 + AT_rich Low_complexity Low_complexity 1 32 0 4 644 827 225 65 32 chr13 7856101 7856317 -112427995 - Lx5 LINE L1 -11 7039 6817 4 644 580 248 25 13 chr13 7856314 7856473 -112427839 - Lx5 LINE L1 -358 6692 6532 4 644 833 332 14 65 chr13 7856500 7856793 -112427519 + B4 SINE B4 10 287 -5 4 644 210 71 0 0 chr13 7856943 7856971 -112427341 + (ATG)n Simple_repeat Simple_repeat 3 30 0 4 644 257 321 12 0 chr13 7857515 7857599 -112426713 + (TG)n Simple_repeat Simple_repeat 2 86 0 4 644 286 345 148 51 chr13 7857777 7857994 -112426318 - B4A SINE B4 -1 291 54 4 644 250 273 111 74 chr13 7858388 7858578 -112425734 - RLTR20B1 LTR ERVK -263 300 104 4 644 1090 321 58 55 chr13 7858861 7859317 -112424995 + Lx8 LINE L1 6883 7330 -143 4 644 617 277 36 5 chr13 7859317 7859509 -112424803 + B3 SINE B2 1 198 -18 4 644 1090 321 58 55 chr13 7859509 7859635 -112424677 + Lx8 LINE L1 7331 7467 -6 4 644 492 18 0 0 chr13 7859659 7859716 -112424596 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 644 1158 68 0 7 chr13 7861173 7861321 -112422991 - B1_Mus2 SINE Alu 0 147 1 4 644 24 0 0 0 chr13 7862013 7862037 -112422275 + AT_rich Low_complexity Low_complexity 1 24 0 4 644 2532 84 3 20 chr13 7862475 7862827 -112421485 + L1_Mus2 LINE L1 6213 6558 -8 4 644 212 0 0 35 chr13 7862830 7862859 -112421453 + (TAA)n Simple_repeat Simple_repeat 2 29 0 4 644 197 211 18 0 chr13 7864209 7864266 -112420046 + CT-rich Low_complexity Low_complexity 2 59 0 5 645 221 294 6 0 chr13 7864474 7864637 -112419675 + (CAT)n Simple_repeat Simple_repeat 1 164 0 5 645 234 190 128 20 chr13 7864996 7865098 -112419214 + Lx9 LINE L1 7532 7644 0 5 645 375 89 0 0 chr13 7865275 7865331 -112418981 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 645 297 346 100 68 chr13 7865376 7865655 -112418657 - B4 SINE B4 0 292 5 5 645 2505 58 0 0 chr13 7866029 7866342 -112417970 - L1Md_F2 LINE L1 -374 6208 5896 5 645 2826 62 5 0 chr13 7866342 7866716 -112417596 + L1Md_F2 LINE L1 6207 6582 0 5 645 186 43 0 0 chr13 7866722 7866745 -112417567 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 645 371 271 45 55 chr13 7866750 7866949 -112417363 + L1MC LINE L1 3510 3706 -2440 5 645 22 117 0 0 chr13 7866979 7867099 -112417213 + AT_rich Low_complexity Low_complexity 1 120 0 5 645 217 155 17 17 chr13 7867192 7867251 -112417061 + GA-rich Low_complexity Low_complexity 2 60 0 5 645 408 40 0 0 chr13 7867254 7867304 -112417008 + (GGGGA)n Simple_repeat Simple_repeat 4 53 0 5 645 953 113 7 0 chr13 7867304 7867454 -112416858 + (GAAAA)n Simple_repeat Simple_repeat 4 154 0 5 645 2529 249 36 11 chr13 7868047 7868595 -112415717 - Lx6 LINE L1 -2 7458 6897 5 645 317 157 0 41 chr13 7868706 7868754 -112415558 + A-rich Low_complexity Low_complexity 1 48 0 5 645 2375 64 0 3 chr13 7868754 7869092 -112415220 + L1Md_F2 LINE L1 6265 6582 0 5 645 543 325 50 0 chr13 7870289 7870489 -112413823 - B3 SINE B2 -6 210 1 5 645 185 86 57 0 chr13 7870638 7870673 -112413639 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 5 645 776 312 20 0 chr13 7870673 7870875 -112413437 - B3 SINE B2 -2 214 9 5 645 610 228 24 8 chr13 7870880 7871004 -112413308 + URR1A DNA MER1_type 1 126 -100 5 645 594 102 128 9 chr13 7871067 7871176 -112413136 + URR1A DNA MER1_type 104 225 -1 5 645 296 48 24 0 chr13 7872460 7872502 -112411810 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 645 1077 149 23 0 chr13 7872506 7872681 -112411631 - B2_Mm2 SINE B2 -16 179 1 5 645 13138 156 19 9 chr13 7872921 7876061 -112408251 - Lx LINE L1 -6 6648 3474 5 645 4698 100 1 0 chr13 7876061 7876711 -112407601 - L1_Mus2 LINE L1 0 6566 5916 5 645 13138 175 21 10 chr13 7876711 7876853 -112407459 - Lx LINE L1 -2410 3473 3332 5 645 222 176 0 0 chr13 7877438 7877489 -112406823 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 5 645 444 19 0 0 chr13 7878279 7878332 -112405980 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 645 494 302 129 41 chr13 7878969 7879311 -112405001 - MLT1B LTR MaLR -9 381 10 5 645 5131 134 68 30 chr13 7879800 7880723 -112403589 - RMER17B LTR ERVK 0 958 1 5 645 22 94 0 0 chr13 7880967 7881031 -112403281 + AT_rich Low_complexity Low_complexity 1 64 0 5 645 28 0 0 0 chr13 7881081 7881109 -112403203 + AT_rich Low_complexity Low_complexity 1 28 0 5 645 492 68 0 0 chr13 7881186 7881259 -112403053 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 645 217 357 46 35 chr13 7881410 7881497 -112402815 - RSINE1 SINE B4 -76 89 2 5 645 1032 264 0 19 chr13 7882882 7883098 -112401214 - ID_B1 SINE B4 -10 214 3 5 645 234 0 0 0 chr13 7884011 7884037 -112400275 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 645 286 280 43 78 chr13 7884086 7884202 -112400110 - RSINE1 SINE B4 -36 129 18 5 645 494 287 86 7 chr13 7884216 7884367 -112399945 - MLT1A0 LTR MaLR -5 360 198 5 645 1784 283 35 6 chr13 7884396 7884879 -112399433 - Lx9 LINE L1 -804 6840 6344 5 645 383 289 115 15 chr13 7885027 7885157 -112399155 - MTC LTR MaLR -31 348 206 5 645 441 0 0 0 chr13 7885230 7885279 -112399033 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 645 780 21 0 0 chr13 7885279 7885372 -112398940 + (CA)n Simple_repeat Simple_repeat 1 94 0 5 645 888 43 17 0 chr13 7885390 7885505 -112398807 - L1_Mm LINE L1 -1789 4094 3978 5 645 580 100 0 0 chr13 7885505 7885585 -112398727 - MTC LTR MaLR -341 80 1 5 645 1549 242 79 43 chr13 7885585 7886051 -112398261 - Lx4B LINE L1 -566 6492 6010 5 645 1791 246 62 9 chr13 7886045 7886497 -112397815 + Lx3C LINE L1 6490 6965 -11 5 645 405 0 0 0 chr13 7886498 7886543 -112397769 + (TAA)n Simple_repeat Simple_repeat 1 45 0 5 645 223 308 15 44 chr13 7886681 7886749 -112397563 + ID4_ SINE ID 18 83 0 5 645 239 0 32 0 chr13 7887027 7887058 -112397254 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 645 1071 109 0 7 chr13 7887063 7887211 -112397101 - B1_Mus1 SINE Alu 0 148 2 5 645 201 158 0 0 chr13 7887443 7887481 -112396831 + T-rich Low_complexity Low_complexity 1 38 0 5 645 442 265 113 46 chr13 7887513 7887707 -112396605 - MLT1B LTR MaLR -88 302 96 5 645 25693 123 17 11 chr13 7887770 7892652 -112391660 - L1_Mus3 LINE L1 0 6813 1500 5 645 37545 46 0 3 chr13 7892659 7898979 -112385333 - L1Md_T LINE L1 0 6585 191 5 645 3540 96 5 28 chr13 7898974 7899389 -112384923 - L1VL1 LINE L1 -2148 1550 1141 5 645 3386 36 56 2 chr13 7899389 7899803 -112384509 - RLTR10C LTR ERVK 0 436 1 5 645 4511 152 14 62 chr13 7899803 7900057 -112384255 - L1VL1 LINE L1 -2558 1140 885 5 645 670 165 22 8 chr13 7900057 7900191 -112384121 - BC1_Mm scRNA scRNA -16 136 1 5 645 4511 152 14 62 chr13 7900191 7900918 -112383394 - L1VL1 LINE L1 -2558 884 149 5 645 5579 45 0 4 chr13 7901056 7901740 -112382572 + L1Md_F2 LINE L1 5902 6582 0 5 645 225 132 0 0 chr13 7903635 7903673 -112380639 + (TTA)n Simple_repeat Simple_repeat 2 39 0 5 645 215 103 26 0 chr13 7903673 7903712 -112380600 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 645 410 326 0 96 chr13 7903712 7903868 -112380444 - RSINE1 SINE B4 -20 145 5 5 645 21 0 0 0 chr13 7904037 7904058 -112380254 + AT_rich Low_complexity Low_complexity 1 21 0 5 645 231 200 0 22 chr13 7904200 7904246 -112380066 - LSU-rRNA_Hsa rRNA rRNA -2590 2445 2401 5 645 761 135 25 8 chr13 7905779 7906017 -112378295 + (TAGA)n Simple_repeat Simple_repeat 1 241 0 5 645 260 0 57 0 chr13 7906185 7906220 -112378092 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5 645 2680 226 30 2 chr13 7906449 7907012 -112377300 - Lx5 LINE L1 -3 7047 6469 5 645 183 184 0 0 chr13 7907012 7907050 -112377262 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 5 645 3316 41 5 0 chr13 7907876 7908270 -112376042 - MTA_Mm LTR MaLR 0 396 1 5 645 457 45 15 0 chr13 7908270 7908336 -112375976 - MTA_Mm-int LTR MaLR 0 1098 1032 5 645 1704 107 92 0 chr13 7908352 7908624 -112375688 - RLTR1B LTR ERV1 -76 436 140 5 645 7128 47 48 39 chr13 7908603 7909614 -112374698 - MTA_Mm-int LTR MaLR -78 1020 1 5 645 446 54 0 0 chr13 7909614 7909664 -112374648 + MTB LTR MaLR 351 400 0 5 645 303 359 44 77 chr13 7910519 7910700 -112373612 - B4A SINE B4 -117 175 1 5 645 432 0 0 0 chr13 7910766 7910814 -112373498 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 645 211 185 30 89 chr13 7910834 7910935 -112373377 + (CATATA)n Simple_repeat Simple_repeat 2 96 0 5 645 222 37 0 0 chr13 7911492 7911519 -112372793 + (TATAA)n Simple_repeat Simple_repeat 4 30 0 5 645 21 36 0 0 chr13 7912587 7912615 -112371697 + AT_rich Low_complexity Low_complexity 1 28 0 5 645 737 155 7 27 chr13 7912633 7912779 -112371533 + L1_Mm LINE L1 4969 5111 -772 5 645 500 192 0 32 chr13 7912779 7912903 -112371409 + Lx LINE L1 6535 6654 0 5 645 1937 188 75 79 chr13 7913028 7913559 -112370753 - RLTR24 LTR ERV1 0 529 1 5 645 396 0 0 0 chr13 7914143 7914187 -112370125 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 645 256 359 43 0 chr13 7914309 7914565 -112369747 - L1MB4 LINE L1 -26 6154 5888 5 645 21 71 0 0 chr13 7914578 7914620 -112369692 + AT_rich Low_complexity Low_complexity 1 42 0 5 645 3543 136 24 12 chr13 7915395 7915968 -112368344 - Lx2 LINE L1 -1 6996 6417 5 645 29601 129 28 37 chr13 7915994 7922366 -112361946 - L1_Mus1 LINE L1 0 6567 261 5 645 29 70 0 0 chr13 7922814 7922871 -112361441 + AT_rich Low_complexity Low_complexity 1 57 0 5 645 746 221 43 26 chr13 7922992 7923224 -112361088 + Lx7 LINE L1 1362 1597 -4283 5 645 5434 211 28 25 chr13 7923214 7923846 -112360466 + Lx7 LINE L1 4647 5286 -594 5 645 207 0 0 0 chr13 7923846 7923869 -112360443 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 645 7656 224 35 33 chr13 7923869 7924940 -112359372 + Lx7 LINE L1 5287 6378 -1318 5 645 1170 186 5 0 chr13 7924940 7925161 -112359151 - URR1A DNA MER1_type 0 226 5 5 645 7656 240 45 42 chr13 7925161 7925869 -112358443 + Lx7 LINE L1 6379 7075 -621 5 645 5125 85 14 0 chr13 7925869 7926564 -112357748 + L1_Mus3 LINE L1 5932 6636 -2 5 645 7656 240 45 42 chr13 7926564 7926846 -112357466 + Lx7 LINE L1 7076 7375 -321 5 645 285 29 0 0 chr13 7926846 7926880 -112357432 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 5 645 4022 87 2 2 chr13 7926888 7927430 -112356882 - L1_Mus2 LINE L1 -2 6564 6023 5 645 7656 240 45 42 chr13 7927430 7927758 -112356554 + Lx7 LINE L1 7379 7695 -1 5 645 623 322 69 11 chr13 7928067 7928343 -112355969 + B4A SINE B4 1 292 0 5 645 267 314 116 26 chr13 7928422 7928612 -112355700 + MIR SINE MIR 54 260 -2 5 645 27 29 0 0 chr13 7928726 7928760 -112355552 + AT_rich Low_complexity Low_complexity 1 34 0 5 645 351 0 0 0 chr13 7929610 7929649 -112354663 + (CTTA)n Simple_repeat Simple_repeat 1 39 0 5 645 15100 172 139 78 chr13 7929765 7932111 -112352201 - Lx5 LINE L1 -135 6915 4233 5 645 1349 249 26 11 chr13 7932111 7932462 -112351850 - RMER12 LTR ERVK -1495 353 2 5 645 15100 172 139 78 chr13 7932462 7935357 -112348955 - Lx5 LINE L1 -135 4232 920 5 645 1541 80 13 18 chr13 7935970 7936198 -112348114 + L1_Mus3 LINE L1 6405 6631 -7 5 645 22 35 0 0 chr13 7936256 7936285 -112348027 + AT_rich Low_complexity Low_complexity 1 29 0 5 645 445 277 22 14 chr13 7936357 7936496 -112347816 + B1F SINE Alu 5 144 -5 5 645 224 299 49 49 chr13 7937068 7937149 -112347163 + RSINE1 SINE B4 85 165 0 5 645 570 363 6 0 chr13 7937287 7937458 -112346854 + B4A SINE B4 34 205 -87 5 645 405 148 0 0 chr13 7937544 7937625 -112346687 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 645 5023 81 22 9 chr13 7940359 7941055 -112343257 - L1Md_F2 LINE L1 -3 6579 5875 5 645 7926 71 1 0 chr13 7941055 7942080 -112342232 + L1Md_F2 LINE L1 4858 5883 0 5 645 3593 77 2 0 chr13 7942110 7942580 -112341732 - L1_Mus1 LINE L1 -408 6159 5689 5 645 26 50 0 0 chr13 7943344 7943384 -112340928 + AT_rich Low_complexity Low_complexity 1 40 0 6 645 1176 182 13 0 chr13 7943392 7943617 -112340695 - Lx3A LINE L1 -7 6974 6747 6 645 1052 342 13 3 chr13 7943628 7943945 -112340367 - MTE2b LTR MaLR -59 320 1 6 645 1141 70 0 0 chr13 7944585 7944728 -112339584 + B1_Mm SINE Alu 2 144 -3 6 645 234 0 0 0 chr13 7944728 7944754 -112339558 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 6 645 2013 327 73 35 chr13 7944855 7945623 -112338689 + MTE-int LTR MaLR 485 1281 -299 6 645 979 211 19 29 chr13 7946182 7946387 -112337925 - ORR1C2 LTR MaLR -2 382 180 6 645 302 351 16 11 chr13 7946506 7946693 -112337619 + Lx8 LINE L1 6627 6814 -659 6 645 2226 198 15 2 chr13 7946693 7947093 -112337219 - MTC LTR MaLR 0 421 17 6 645 4703 109 19 10 chr13 7947093 7947789 -112336523 + Lx3A LINE L1 6267 6968 -13 6 645 411 21 0 0 chr13 7947789 7947837 -112336475 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 6 645 493 356 70 15 chr13 7947865 7948136 -112336176 + Lx8 LINE L1 6832 7117 -356 6 645 3018 14 42 3 chr13 7948386 7948739 -112335573 - IAPLTR1_Mm LTR ERVK 0 367 1 6 645 53018 25 14 2 chr13 7948739 7955135 -112329177 - IAPEz-int LTR ERVK 0 6481 8 6 645 3018 14 42 3 chr13 7955135 7955488 -112328824 - IAPLTR1_Mm LTR ERVK 0 367 1 6 645 1949 217 47 43 chr13 7955937 7956448 -112327864 + RMER1C Other Other 815 1327 -15 6 645 507 329 71 59 chr13 7956493 7956732 -112327580 - ORR1E LTR MaLR -103 256 15 6 645 1054 234 82 44 chr13 7957119 7957459 -112326853 - Lx9 LINE L1 -764 6880 6528 6 645 855 253 114 68 chr13 7957464 7957876 -112326436 - Lx2B LINE L1 0 7000 6570 6 645 804 252 83 40 chr13 7957880 7958463 -112325849 - Lx9 LINE L1 -1107 6537 5830 6 645 4777 140 14 0 chr13 7958485 7959205 -112325107 - Lx4A LINE L1 -4 7054 6325 6 645 675 80 9 18 chr13 7960502 7960616 -112323696 + (GGGAGA)n Simple_repeat Simple_repeat 2 114 0 6 645 1079 97 7 0 chr13 7960887 7961031 -112323281 + B1_Mus2 SINE Alu 1 145 -2 6 645 243 0 0 0 chr13 7961031 7961058 -112323254 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 645 236 111 0 22 chr13 7961079 7961125 -112323187 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 6 645 227 216 78 0 chr13 7961632 7961683 -112322629 - ORR1E LTR MaLR -324 55 1 6 645 239 182 254 0 chr13 7961746 7961801 -112322511 + MTE2b LTR MaLR 35 103 -276 6 645 3476 25 2 0 chr13 7961815 7962210 -112322102 - MTA_Mm LTR MaLR 0 396 1 6 645 346 313 45 0 chr13 7962786 7962920 -112321392 - B1F SINE Alu -8 141 2 6 645 23 0 0 0 chr13 7963950 7963973 -112320339 + AT_rich Low_complexity Low_complexity 1 23 0 6 645 447 68 0 0 chr13 7964553 7964612 -112319700 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 645 21 71 0 0 chr13 7964703 7964745 -112319567 + AT_rich Low_complexity Low_complexity 1 42 0 6 645 2228 146 64 15 chr13 7964763 7965167 -112319145 - Lx2 LINE L1 -1 6996 6573 6 645 485 332 75 29 chr13 7965223 7965462 -112318850 + MTD LTR MaLR 22 271 -148 6 645 1185 77 0 0 chr13 7965658 7965828 -112318484 + (TG)n Simple_repeat Simple_repeat 2 171 0 6 645 2800 235 191 37 chr13 7966862 7967870 -112316442 - RMER1C Other Other -5 1337 175 6 645 249 154 0 0 chr13 7967881 7967933 -112316379 + Lx2 LINE L1 6868 6919 -78 6 645 307 277 129 21 chr13 7968013 7968153 -112316159 - RMER1B Other Other -329 737 583 6 645 221 102 99 28 chr13 7968867 7968938 -112315374 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 6 645 3948 127 34 0 chr13 7969045 7969626 -112314686 - MT2B LTR ERVL 0 601 1 6 645 1300 161 0 13 chr13 7970182 7970408 -112313904 - Lx2 LINE L1 0 6997 6775 6 645 4518 110 35 6 chr13 7970408 7971130 -112313182 - Lx2 LINE L1 -354 6643 5901 6 645 222 62 0 0 chr13 7971795 7971827 -112312485 + (T)n Simple_repeat Simple_repeat 1 32 0 6 645 14774 164 8 109 chr13 7973131 7978055 -112306257 - Lx LINE L1 -3 6651 2267 6 645 23 0 0 0 chr13 7978149 7978172 -112306140 + AT_rich Low_complexity Low_complexity 1 23 0 6 645 203 88 0 29 chr13 7978458 7978493 -112305819 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 6 645 447 304 0 0 chr13 7979275 7979390 -112304922 + PB1D10 SINE Alu 2 116 -1 6 645 201 175 0 0 chr13 7980231 7980271 -112304041 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 645 703 291 93 51 chr13 7980697 7980893 -112303419 + B4A SINE B4 5 222 -70 6 645 410 0 20 0 chr13 7980893 7980943 -112303369 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 6 645 703 291 93 51 chr13 7980943 7981003 -112303309 + B4A SINE B4 223 272 -20 6 645 342 0 0 0 chr13 7981044 7981082 -112303230 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 645 268 217 0 0 chr13 7981177 7981223 -112303089 + B1F SINE Alu 18 63 -86 6 645 406 263 94 7 chr13 7981207 7981345 -112302967 + MTEb LTR MaLR 224 373 -6 6 645 6246 67 0 2 chr13 7983245 7984042 -112300270 - L1Md_F2 LINE L1 -14 6568 5774 6 645 5886 72 6 1 chr13 7984042 7984880 -112299432 + L1_Mm LINE L1 3972 4813 -1070 6 645 424 45 45 0 chr13 7984862 7984929 -112299383 + L1_Mm LINE L1 5387 5456 -427 6 645 34659 45 1 32 chr13 7984929 7989924 -112294388 + L1Md_A LINE L1 633 5586 -297 6 645 7655 57 1 28 chr13 7989924 7990948 -112293364 + L1Md_F2 LINE L1 5587 6582 0 6 645 34659 41 1 29 chr13 7990948 7991307 -112293005 + L1Md_A LINE L1 5587 5810 -73 6 645 3523 171 40 12 chr13 7991307 7991933 -112292379 - RMER19A LTR ERVK -18 719 1 6 645 1380 167 5 0 chr13 7992914 7993136 -112291176 + Lx4A LINE L1 6825 7047 -11 6 645 443 33 0 16 chr13 7993140 7993202 -112291110 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 80 2632 256 78 21 chr13 7995121 7996036 -112288276 - Lx9 LINE L1 -8 7636 6670 6 646 1277 231 106 23 chr13 7996042 7996392 -112287920 + Lx9 LINE L1 6308 6686 -958 6 646 613 355 11 0 chr13 7996503 7996686 -112287626 + B3A SINE B2 1 185 -13 6 646 192 77 0 0 chr13 7996700 7996726 -112287586 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 646 27 29 0 0 chr13 7997507 7997541 -112286771 + AT_rich Low_complexity Low_complexity 1 34 0 6 646 1160 216 169 3 chr13 7997541 7997924 -112286388 - Lx9 LINE L1 -8 7636 7191 6 646 526 339 86 5 chr13 7997924 7998111 -112286201 - ID_B1 SINE B4 -21 203 2 6 646 1182 68 0 0 chr13 7999575 7999722 -112284590 + B1_Mm SINE Alu 1 147 0 6 646 1353 169 4 8 chr13 7999742 7999998 -112284314 + L1VL1 LINE L1 1 255 -6167 6 646 31201 88 7 8 chr13 8000009 8005122 -112279190 + L1Md_F2 LINE L1 480 5585 -298 1 646 7214 89 1 11 chr13 8005123 8006127 -112278185 + L1Md_F2 LINE L1 5587 6580 -2 1 646 959 105 0 15 chr13 8006217 8006352 -112277960 + B1_Mus1 SINE Alu 3 135 -13 2 646 359 21 21 0 chr13 8006352 8006400 -112277912 + (CAAAA)n Simple_repeat Simple_repeat 1 49 0 3 646 270 322 89 0 chr13 8006464 8006554 -112277758 + PB1D10 SINE Alu 1 98 -19 4 646 438 192 113 19 chr13 8006880 8006986 -112277326 + PB1D9 SINE Alu 2 117 -3 5 646 23 0 0 0 chr13 8007271 8007294 -112277018 + AT_rich Low_complexity Low_complexity 1 23 0 6 646 596 296 46 0 chr13 8007815 8007967 -112276345 + B3A SINE B2 40 198 0 7 646 653 79 10 0 chr13 8008089 8008190 -112276122 + (TAGA)n Simple_repeat Simple_repeat 4 105 0 8 646 258 176 0 0 chr13 8008954 8009005 -112275307 + T-rich Low_complexity Low_complexity 1 51 0 9 646 26 0 0 0 chr13 8010464 8010490 -112273822 + AT_rich Low_complexity Low_complexity 1 26 0 1 646 2223 294 63 59 chr13 8010773 8011317 -112272995 - Lx8 LINE L1 -405 7068 6493 1 646 1083 84 0 0 chr13 8011317 8011459 -112272853 + B1_Mm SINE Alu 3 144 -3 1 646 2223 294 63 59 chr13 8011459 8011808 -112272504 - Lx8 LINE L1 -981 6492 6172 1 646 337 208 147 10 chr13 8012191 8012293 -112272019 - PB1D10 SINE Alu -1 116 1 1 646 278 214 11 0 chr13 8012354 8012443 -112271869 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 646 533 14 29 0 chr13 8012445 8012514 -112271798 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1 646 830 192 123 28 chr13 8013203 8013455 -112270857 - Lx9 LINE L1 -8 7636 7361 1 646 5501 155 26 37 chr13 8013944 8015043 -112269269 - L1_Mur2 LINE L1 -1209 4668 3582 1 646 267 296 86 50 chr13 8016631 8016770 -112267542 - ID_B1 SINE B4 0 224 81 1 646 2319 51 105 3 chr13 8017848 8018161 -112266151 + ORR1A1 LTR MaLR 1 345 -1 1 646 32 26 0 0 chr13 8018753 8018792 -112265520 + AT_rich Low_complexity Low_complexity 1 39 0 2 646 29 0 0 0 chr13 8019378 8019407 -112264905 + AT_rich Low_complexity Low_complexity 1 29 0 2 646 5115 117 13 10 chr13 8019431 8020223 -112264089 + Lx3_Mus LINE L1 6216 7009 0 2 646 354 324 7 0 chr13 8020324 8020466 -112263846 + B1F SINE Alu 5 147 -2 2 646 350 288 123 42 chr13 8020588 8020849 -112263463 + L1M5 LINE L1 3923 4204 -1942 2 646 2307 111 150 2 chr13 8021156 8021570 -112262742 - IAPLTR2_Mm LTR ERVK 0 475 1 2 646 6107 39 3 20 chr13 8021570 8022329 -112261983 - IAPEz-int LTR ERVK 0 6481 5736 2 646 2222 68 0 0 chr13 8022328 8022606 -112261706 - IAPEz-int LTR ERVK -4845 1636 1359 2 646 3815 61 2 18 chr13 8022606 8023109 -112261203 - IAPEz-int LTR ERVK -5819 662 168 2 646 234 321 0 0 chr13 8023109 8023162 -112261150 - RLTR27 LTR ERVK -34 275 223 2 646 983 92 74 74 chr13 8023162 8023338 -112260974 - IAPEz-int LTR ERVK -6286 195 20 2 646 362 68 81 0 chr13 8023349 8023423 -112260889 - IAPEz-int LTR ERVK -1905 82 3 2 646 2425 89 176 12 chr13 8023425 8023833 -112260479 - IAPLTR2_Mm LTR ERVK 0 475 1 2 646 696 298 96 79 chr13 8023899 8024352 -112259960 - RMER13A LTR ERVK -319 589 95 2 646 181 326 10 71 chr13 8024777 8024876 -112259436 - L4 LINE RTE -246 1783 1691 2 646 338 277 8 74 chr13 8025403 8025524 -112258788 + B3A SINE B2 70 182 -16 2 646 208 104 20 40 chr13 8027117 8027167 -112257145 + T-rich Low_complexity Low_complexity 2 50 0 3 646 1092 80 0 0 chr13 8028168 8028305 -112256007 + B1_Mm SINE Alu 1 137 -10 3 646 261 0 0 0 chr13 8028305 8028334 -112255978 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 646 558 0 0 0 chr13 8028686 8028748 -112255564 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 3 646 2103 123 66 30 chr13 8029253 8029646 -112254666 - RLTR9E LTR ERVK -2 407 1 3 646 383 311 131 25 chr13 8032980 8033224 -112251088 - L1M5 LINE L1 -2246 3900 3631 3 646 576 302 173 46 chr13 8034395 8034718 -112249594 + MTD LTR MaLR 8 371 -48 3 646 22 56 0 0 chr13 8035413 8035449 -112248863 + AT_rich Low_complexity Low_complexity 1 36 0 3 646 257 298 188 26 chr13 8035546 8035663 -112248649 - B1F SINE Alu 0 149 14 3 646 714 241 77 39 chr13 8036154 8036361 -112247951 + B3 SINE B2 2 216 0 3 646 35369 41 2 3 chr13 8036635 8041707 -112242605 + L1Md_A LINE L1 430 5589 -297 4 646 8759 16 0 0 chr13 8041707 8042703 -112241609 + L1Md_A LINE L1 5590 6585 0 4 646 5190 39 0 0 chr13 8042702 8043323 -112240989 + L1Md_T LINE L1 5962 6582 0 4 646 4025 102 17 10 chr13 8043486 8044077 -112240235 + Lx2 LINE L1 6403 6997 0 4 646 189 0 0 0 chr13 8044945 8044966 -112239346 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 646 594 330 43 16 chr13 8045232 8045472 -112238840 + B4A SINE B4 50 286 -6 4 646 247 231 0 30 chr13 8045493 8045560 -112238752 + L1MA9 LINE L1 5901 5965 -347 4 646 311 234 13 17 chr13 8045770 8045866 -112238446 + L1MC LINE L1 5643 5737 -2048 4 646 637 115 26 0 chr13 8046158 8046271 -112238041 + (TTTC)n Simple_repeat Simple_repeat 2 117 0 4 646 1158 82 0 0 chr13 8046279 8046426 -112237886 - B1_Mus1 SINE Alu 0 148 2 4 646 222 312 0 24 chr13 8047596 8047678 -112236634 + CT-rich Low_complexity Low_complexity 2 81 0 4 646 486 0 0 0 chr13 8048979 8049033 -112235279 + (TTCC)n Simple_repeat Simple_repeat 1 54 0 5 646 677 92 68 0 chr13 8049199 8049362 -112234950 + (TAGA)n Simple_repeat Simple_repeat 1 174 0 5 646 27 81 0 0 chr13 8049856 8049918 -112234394 + AT_rich Low_complexity Low_complexity 1 62 0 5 646 7705 95 6 3 chr13 8051435 8052734 -112231578 + L1_Mus3 LINE L1 5331 6634 -4 5 646 420 24 34 56 chr13 8054326 8054415 -112229897 + (TTG)n Simple_repeat Simple_repeat 2 88 0 5 646 855 85 16 0 chr13 8054568 8054697 -112229615 + B1_Mus2 SINE Alu 17 147 0 5 646 198 191 0 0 chr13 8054697 8054739 -112229573 + A-rich Low_complexity Low_complexity 2 43 0 5 646 462 319 7 28 chr13 8054874 8055019 -112229293 - ID_B1 SINE B4 -1 223 82 5 646 1043 38 0 8 chr13 8055189 8055322 -112228990 + (GGAAA)n Simple_repeat Simple_repeat 2 133 0 5 646 612 40 0 0 chr13 8055322 8055397 -112228915 + (GGGA)n Simple_repeat Simple_repeat 1 75 0 5 646 360 0 0 0 chr13 8056796 8056836 -112227476 + (TC)n Simple_repeat Simple_repeat 2 41 0 6 646 5432 83 41 1 chr13 8056838 8057593 -112226719 - L1_Mus4 LINE L1 -15 6621 5837 6 646 2444 128 21 11 chr13 8057593 8057973 -112226339 + L1_Mus4 LINE L1 5446 5829 -54 6 646 204 67 0 0 chr13 8058371 8058401 -112225911 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 6 646 569 14 14 0 chr13 8058576 8058646 -112225666 + (TC)n Simple_repeat Simple_repeat 1 71 0 6 646 375 41 0 0 chr13 8058646 8058694 -112225618 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 646 583 216 21 7 chr13 8059084 8059224 -112225088 - Lx2B LINE L1 -2 6998 6857 6 646 438 20 0 0 chr13 8059284 8059335 -112224977 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 646 714 301 63 74 chr13 8059375 8059644 -112224668 - ORR1E LTR MaLR -86 273 8 6 646 27 0 0 0 chr13 8060058 8060085 -112224227 + AT_rich Low_complexity Low_complexity 1 27 0 6 646 300 306 81 33 chr13 8060573 8060728 -112223584 - B4 SINE B4 -131 161 11 6 646 408 328 116 33 chr13 8061184 8061607 -112222705 + L1MA7 LINE L1 5825 6282 -9 7 646 184 284 169 11 chr13 8061987 8062076 -112222236 - L3 LINE CR1 -140 4349 4247 7 646 654 310 78 30 chr13 8063384 8063661 -112220651 - MTE-int LTR MaLR -454 1126 774 7 646 1416 45 0 28 chr13 8063661 8063829 -112220483 - L1Md_F2 LINE L1 -381 6201 6034 7 646 2782 45 28 6 chr13 8063829 8064186 -112220126 + L1Md_F2 LINE L1 6206 6570 -12 7 646 1416 45 0 28 chr13 8064186 8064199 -112220113 - L1Md_F2 LINE L1 -549 6033 6025 7 646 297 372 91 29 chr13 8064481 8064722 -112219590 - MTE-int LTR MaLR -1324 256 1 7 646 1399 110 14 0 chr13 8064744 8064963 -112219349 - L1_Mus3 LINE L1 0 6638 6417 7 646 275 121 17 0 chr13 8065101 8065159 -112219153 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 7 646 2615 78 3 11 chr13 8065172 8065537 -112218775 - L1Md_F2 LINE L1 0 6582 6221 7 646 232 261 0 43 chr13 8066138 8066230 -112218082 + LTR90B LTR LTR 300 387 -409 7 646 3286 16 34 3 chr13 8066390 8066774 -112217538 - MTA_Mm LTR MaLR 0 396 1 7 646 987 294 55 31 chr13 8067007 8067425 -112216887 - Lx8 LINE L1 -1 7472 7045 7 646 378 0 0 0 chr13 8067462 8067504 -112216808 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 646 468 0 0 0 chr13 8067504 8067555 -112216757 + (CA)n Simple_repeat Simple_repeat 1 52 0 8 646 253 279 15 0 chr13 8067578 8067646 -112216666 - Lx8 LINE L1 -569 6904 6836 7 646 414 240 180 0 chr13 8067680 8067780 -112216532 - B4A SINE B4 -72 220 103 8 646 7234 127 10 5 chr13 8067980 8069465 -112214847 - L1_Mus3 LINE L1 0 6638 5149 8 646 4997 109 60 20 chr13 8069465 8070320 -112213992 + RMER17D LTR ERVK 1 889 0 8 646 4591 172 0 13 chr13 8070320 8070399 -112213913 - L1_Mus3 LINE L1 -735 5148 5071 8 646 5697 93 8 1 chr13 8070675 8071467 -112212845 - L1_Mus1 LINE L1 0 6567 5771 8 646 749 144 0 0 chr13 8071472 8071597 -112212715 - L1Md_F LINE L1 -6288 231 107 8 646 3202 55 0 0 chr13 8071597 8072001 -112212311 + L1Md_F2 LINE L1 6171 6574 -8 8 646 7932 78 1 0 chr13 8072001 8073041 -112211271 - L1_Mm LINE L1 -105 5778 4738 8 646 1264 155 0 4 chr13 8073040 8073267 -112211045 - L1_Mus3 LINE L1 -800 5083 4858 8 646 7466 136 36 6 chr13 8073265 8074035 -112210277 + L1_Mm LINE L1 3566 4365 -1518 8 646 489 17 0 0 chr13 8074035 8074093 -112210219 + (CA)n Simple_repeat Simple_repeat 1 58 0 9 646 7466 136 36 6 chr13 8074093 8074587 -112209725 + L1_Mm LINE L1 4366 4866 -1017 8 646 296 176 0 14 chr13 8074862 8074931 -112209381 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 9 646 802 264 80 28 chr13 8075261 8075510 -112208802 - Lx8 LINE L1 0 7473 7212 9 646 7124 92 44 3 chr13 8075701 8077006 -112207306 + Lx3_Mus LINE L1 4866 6239 -770 9 646 588 14 0 0 chr13 8077006 8077075 -112207237 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 9 646 268 206 82 0 chr13 8078110 8078207 -112206105 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 9 646 218 355 64 0 chr13 8079149 8079259 -112205053 + MIR SINE MIR 33 149 -113 9 646 208 184 40 10 chr13 8079308 8079407 -112204905 + (TAGA)n Simple_repeat Simple_repeat 1 102 0 9 646 225 154 0 0 chr13 8080187 8080226 -112204086 + Lx6 LINE L1 7411 7449 -11 9 646 353 338 86 53 chr13 8080457 8080529 -112203783 - B4 SINE B4 -4 288 125 9 646 634 207 0 0 chr13 8080529 8080645 -112203667 - B1_Mus2 SINE Alu -23 124 9 1 646 353 338 86 53 chr13 8080645 8080666 -112203646 - B4 SINE B4 -4 124 73 9 646 281 214 34 0 chr13 8080666 8080755 -112203557 + CT-rich Low_complexity Low_complexity 2 93 0 1 646 24 32 0 0 chr13 8081008 8081039 -112203273 + AT_rich Low_complexity Low_complexity 1 31 0 1 646 3005 206 68 72 chr13 8081330 8082137 -112202175 - RLTR40 LTR ERVK -13 804 1 1 646 592 92 0 0 chr13 8082431 8082529 -112201783 - L1_Mus2 LINE L1 -3 6563 6466 1 646 7363 103 4 9 chr13 8082779 8083834 -112200478 - L1_Mus3 LINE L1 -2 6636 5588 1 646 1434 105 0 46 chr13 8083838 8083916 -112200396 + L1_Mus3 LINE L1 5368 5445 -438 1 646 3734 52 4 0 chr13 8083916 8084379 -112199933 + L1_Mus1 LINE L1 6103 6567 0 1 646 1434 105 0 46 chr13 8084379 8084519 -112199793 + L1_Mm LINE L1 5446 5576 -307 1 646 284 235 199 19 chr13 8087115 8087271 -112197041 - L1MA8 LINE L1 -22 6269 6086 1 646 3671 76 2 0 chr13 8087498 8088138 -112196174 - L1_Mus1 LINE L1 -511 6056 5416 1 646 3950 65 0 0 chr13 8088138 8088631 -112195681 + L1_Mus1 LINE L1 6075 6567 0 1 646 427 273 154 0 chr13 8089541 8089651 -112194661 + ID_B1 SINE B4 86 212 -12 1 646 558 156 7 15 chr13 8090082 8090219 -112194093 + (TG)n Simple_repeat Simple_repeat 1 136 0 1 646 694 333 55 65 chr13 8090223 8090515 -112193797 - B4A SINE B4 0 292 4 1 646 745 292 13 63 chr13 8091442 8091745 -112192567 + B4A SINE B4 5 292 0 1 646 1146 56 7 0 chr13 8091852 8091996 -112192316 + B1_Mus2 SINE Alu 1 145 -2 1 646 1070 104 0 6 chr13 8091996 8092160 -112192152 + (GAAA)n Simple_repeat Simple_repeat 2 164 0 1 646 231 114 0 0 chr13 8092441 8092476 -112191836 + (A)n Simple_repeat Simple_repeat 1 35 0 1 646 544 244 12 0 chr13 8093195 8093359 -112190953 + (TA)n Simple_repeat Simple_repeat 1 166 0 1 646 213 39 0 0 chr13 8094117 8094143 -112190169 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 646 279 0 0 0 chr13 8094817 8094848 -112189464 + (A)n Simple_repeat Simple_repeat 1 31 0 1 646 872 185 21 21 chr13 8095557 8095750 -112188562 + Lx5 LINE L1 6856 7048 -2 1 646 2346 78 0 0 chr13 8096470 8096776 -112187536 - MTB LTR MaLR -94 306 1 1 646 3119 150 151 17 chr13 8096776 8097425 -112186887 - MTB-int LTR MaLR 0 1258 523 1 646 3020 90 0 2 chr13 8097425 8097835 -112186477 + L1_Mus4 LINE L1 6216 6624 -12 1 646 657 0 0 0 chr13 8097835 8097908 -112186404 + (GAA)n Simple_repeat Simple_repeat 3 75 0 1 646 881 149 18 6 chr13 8097912 8098071 -112186241 - MTB LTR MaLR -256 165 1 1 646 424 283 19 9 chr13 8098071 8098178 -112186134 + Lx6 LINE L1 6982 7089 -371 1 646 336 48 0 0 chr13 8098178 8098220 -112186092 - MTB_Mm LTR MaLR -365 42 1 1 646 198 171 0 0 chr13 8098781 8098822 -112185490 + GA-rich Low_complexity Low_complexity 1 41 0 1 646 722 308 33 61 chr13 8100259 8100609 -112183703 + MT2A LTR ERVL 149 487 -46 1 646 462 18 0 0 chr13 8100609 8100664 -112183648 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 646 722 308 33 61 chr13 8100664 8100707 -112183605 + MT2A LTR ERVL 488 530 -3 1 646 1479 272 27 5 chr13 8101407 8101780 -112182532 + MTD LTR MaLR 1 381 -38 1 646 454 275 109 12 chr13 8101869 8102250 -112182062 - L1M4 LINE L1 -1423 4723 4301 1 646 324 340 49 30 chr13 8102286 8102450 -112181862 - L1M4 LINE L1 -1888 4258 4092 1 646 203 133 0 43 chr13 8102482 8102529 -112181783 + (TTTAA)n Simple_repeat Simple_repeat 5 49 0 1 646 811 307 113 58 chr13 8102544 8103608 -112180704 - L1M4 LINE L1 -2038 4108 2987 1 646 24 0 0 0 chr13 8103824 8103848 -112180464 + AT_rich Low_complexity Low_complexity 1 24 0 1 646 324 120 0 0 chr13 8104761 8104811 -112179501 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 1 646 180 111 0 0 chr13 8104808 8104835 -112179477 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 1 646 2587 67 3 27 chr13 8105156 8105522 -112178790 + L1_Mus1 LINE L1 6211 6567 0 1 646 521 296 65 43 chr13 8105682 8105866 -112178446 - Lx8 LINE L1 -164 7309 7122 1 646 38 61 0 0 chr13 8105886 8105952 -112178360 + AT_rich Low_complexity Low_complexity 1 66 0 1 646 369 268 177 9 chr13 8106113 8106226 -112178086 - MTE2b LTR MaLR -48 331 200 1 646 4198 56 52 13 chr13 8106535 8107078 -112177234 - LTRIS2 LTR ERV1 0 564 1 1 646 307 306 0 0 chr13 8107269 8107354 -112176958 + MLT2B4 LTR ERVL 9 93 -463 1 646 2408 199 99 19 chr13 8107790 8108384 -112175928 + RLTR26 LTR ERVK 1 642 0 1 646 556 236 48 65 chr13 8108953 8109139 -112175173 + Lx9 LINE L1 6995 7177 -467 1 646 212 241 0 24 chr13 8109221 8109316 -112174996 + T-rich Low_complexity Low_complexity 1 92 0 1 646 374 216 14 0 chr13 8110706 8110780 -112173532 + ID2 SINE ID 1 75 -8 1 646 225 291 8 30 chr13 8110803 8110934 -112173378 + Lx9 LINE L1 7517 7644 0 1 646 561 262 9 108 chr13 8111896 8112110 -112172202 + B3A SINE B2 3 195 -3 1 646 351 65 0 0 chr13 8112801 8112847 -112171465 + (TA)n Simple_repeat Simple_repeat 2 47 0 1 646 297 300 44 0 chr13 8112953 8113043 -112171269 + PB1D10 SINE Alu 22 115 -2 1 646 552 269 144 21 chr13 8113139 8113490 -112170822 - Lx8 LINE L1 0 7473 7080 1 646 499 92 11 11 chr13 8113715 8113803 -112170509 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 646 283 292 0 0 chr13 8113810 8113882 -112170430 - B4A SINE B4 -11 281 210 1 646 285 29 0 0 chr13 8114021 8114055 -112170257 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 646 392 288 0 52 chr13 8114063 8114217 -112170095 - Lx7 LINE L1 -289 7407 7262 1 646 937 217 64 4 chr13 8114217 8114481 -112169831 - BGLII_B LTR ERVK 0 441 162 1 646 2905 198 26 13 chr13 8114500 8115118 -112169194 - Lx7 LINE L1 -429 7267 6642 1 646 5911 123 51 14 chr13 8115130 8116098 -112168214 + Lx2B LINE L1 5981 6983 -17 1 646 357 24 0 0 chr13 8116103 8116145 -112168167 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 646 244 275 10 125 chr13 8116392 8116496 -112167816 + MTEb LTR MaLR 1 92 -287 1 646 243 0 0 0 chr13 8116769 8116796 -112167516 + (A)n Simple_repeat Simple_repeat 1 27 0 1 646 268 194 41 0 chr13 8117096 8117152 -112167160 + ID4_ SINE ID 34 91 -61 1 646 224 292 40 27 chr13 8117152 8117170 -112167142 + ID_B1 SINE B4 35 109 -115 1 646 23 33 0 0 chr13 8117291 8117321 -112166991 + AT_rich Low_complexity Low_complexity 1 30 0 1 646 248 333 54 0 chr13 8118609 8118702 -112165610 + MTD LTR MaLR 18 115 -304 1 646 477 47 0 0 chr13 8119034 8119098 -112165214 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 646 388 242 75 38 chr13 8119655 8119788 -112164524 + LTR65 LTR ERV1 23 160 -509 1 646 689 79 10 0 chr13 8119967 8120068 -112164244 + (TC)n Simple_repeat Simple_repeat 1 102 0 1 646 204 282 11 23 chr13 8120337 8120424 -112163888 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 646 251 301 58 64 chr13 8121291 8121447 -112162865 + L4 LINE RTE 200 354 -1675 1 646 200 369 0 10 chr13 8121855 8121959 -112162353 + (CATATA)n Simple_repeat Simple_repeat 2 104 0 1 646 531 45 0 0 chr13 8121966 8122032 -112162280 + (CA)n Simple_repeat Simple_repeat 1 66 0 1 646 309 370 55 6 chr13 8122453 8122616 -112161696 - MLT2B4 LTR ERVL -353 203 33 1 646 616 316 32 41 chr13 8122753 8122971 -112161341 - B3A SINE B2 0 216 1 1 646 282 310 0 12 chr13 8123172 8123257 -112161055 + MER94 DNA AcHobo 35 118 -16 1 646 377 328 56 22 chr13 8123451 8123629 -112160683 - B3A SINE B2 -14 184 1 1 646 5990 87 23 13 chr13 8124255 8125127 -112159185 - L1_Mus4 LINE L1 -1 6635 5755 1 80 7015 119 25 3 chr13 8125151 8127106 -112157206 + Lx LINE L1 4631 6619 -35 1 647 225 257 111 28 chr13 8128309 8128417 -112155895 + RLTR13D5 LTR ERVK 202 318 -705 1 647 210 273 0 0 chr13 8130104 8130159 -112154153 + A-rich Low_complexity Low_complexity 1 55 0 1 647 225 0 0 0 chr13 8130264 8130289 -112154023 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 647 374 344 56 38 chr13 8130326 8130486 -112153826 + RSINE1 SINE B4 3 165 0 1 647 233 241 19 0 chr13 8130961 8131015 -112153297 - LTR85b LTR Gypsy? 0 784 730 1 647 472 212 0 0 chr13 8131195 8131275 -112153037 - RSINE1 SINE B4 -12 153 74 1 647 635 359 47 16 chr13 8132047 8132412 -112151900 - MER89 LTR ERV1 -16 543 168 1 647 640 311 44 0 chr13 8133315 8133498 -112150814 + RMER30 DNA MER1_type 5 195 -7 1 647 711 252 19 71 chr13 8133586 8133911 -112150401 - Lx7 LINE L1 -4 7692 7385 1 647 845 275 16 8 chr13 8133998 8134240 -112150072 - Lx7 LINE L1 -329 7367 7124 1 647 1028 194 51 0 chr13 8134250 8134446 -112149866 - Lx7 LINE L1 -974 6722 6517 1 647 496 324 44 118 chr13 8134519 8134834 -112149478 + B4 SINE B4 1 292 0 1 647 284 158 18 0 chr13 8134834 8134891 -112149421 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 647 255 292 85 0 chr13 8134924 8135030 -112149282 + Tigger5 DNA MER2_type 2228 2342 -64 1 647 753 315 10 43 chr13 8135077 8135376 -112148936 - B4 SINE B4 0 292 4 1 647 254 319 90 60 chr13 8135467 8135634 -112148678 + MER67B LTR ERV1 314 485 -176 1 647 927 256 35 38 chr13 8135934 8136247 -112148065 + Lx8 LINE L1 6651 6962 -511 1 647 2355 57 7 10 chr13 8136486 8136790 -112147522 + L1_Mus1 LINE L1 6265 6567 0 1 647 713 12 12 0 chr13 8138136 8138222 -112146090 + (TC)n Simple_repeat Simple_repeat 2 88 0 1 647 201 74 0 0 chr13 8138238 8138265 -112146047 + (AGGGGG)n Simple_repeat Simple_repeat 3 29 0 1 647 410 348 31 70 chr13 8138395 8138682 -112145630 - B4A SINE B4 -1 291 16 1 647 358 276 88 27 chr13 8138848 8139090 -112145222 - RMER20A LTR ERVK -105 522 235 1 647 684 351 65 19 chr13 8139793 8140101 -112144211 + MER92B LTR ERV1 4 325 -311 1 647 311 230 8 4 chr13 8140698 8140780 -112143532 + ID4_ SINE ID 12 94 -58 1 647 772 262 162 13 chr13 8141440 8141749 -112142563 + ORR1E LTR MaLR 1 355 -4 1 647 851 261 121 32 chr13 8142454 8142834 -112141478 + MTD LTR MaLR 5 418 -1 1 647 214 327 0 0 chr13 8142861 8142913 -112141399 - L3 LINE CR1 -764 3725 3674 1 647 280 357 111 0 chr13 8143024 8143150 -112141162 + B1F SINE Alu 4 143 -6 2 647 351 0 0 0 chr13 8143179 8143218 -112141094 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 647 484 229 73 0 chr13 8143988 8144097 -112140215 - RSINE1 SINE B4 -15 150 34 2 647 549 324 6 45 chr13 8144244 8144422 -112139890 + MTEb LTR MaLR 22 192 -167 2 647 2155 186 47 10 chr13 8144423 8144825 -112139487 - MTC LTR MaLR 0 421 5 2 647 881 134 58 11 chr13 8144829 8145018 -112139294 - MTC-int LTR MaLR 0 1258 1061 2 647 5535 86 5 1 chr13 8145019 8146209 -112138103 + L1_Mus2 LINE L1 5153 6345 -221 2 647 535 238 8 5 chr13 8146223 8146347 -112137965 - MTC LTR MaLR -187 209 90 2 647 1023 144 147 10 chr13 8146347 8146544 -112137768 + URR1B DNA MER1_type 2 225 0 2 647 1255 268 80 52 chr13 8146560 8147108 -112137204 - RLTR31_Mur LTR ERVK 0 561 1 2 647 396 188 0 0 chr13 8147122 8147191 -112137121 - MTC LTR MaLR -352 69 1 2 647 694 209 66 20 chr13 8147196 8147347 -112136965 + MTEb LTR MaLR 219 376 -3 2 647 2349 133 8 16 chr13 8148174 8148557 -112135755 + RLTR11B LTR ERVK 1 380 -73 2 647 585 167 28 0 chr13 8148534 8148642 -112135670 - RLTR11B LTR ERVK -288 165 55 2 647 1345 182 171 30 chr13 8149095 8149281 -112135031 - ORR1D1 LTR MaLR 0 374 170 2 647 468 0 0 0 chr13 8149281 8149333 -112134979 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 647 1345 182 171 30 chr13 8149333 8149474 -112134838 - ORR1D1 LTR MaLR -205 169 1 2 647 458 281 88 26 chr13 8150174 8150401 -112133911 + L1M5 LINE L1 5578 5818 -361 2 647 1143 207 11 18 chr13 8152519 8152799 -112131513 + L1VL1 LINE L1 1 278 -6144 2 647 4113 52 0 28 chr13 8152800 8153329 -112130983 - L1Md_F2 LINE L1 0 6582 6069 2 647 3542 35 0 0 chr13 8153329 8153815 -112130497 + L1Md_A LINE L1 5540 6025 -557 2 647 30593 86 6 7 chr13 8153810 8158900 -112125412 + L1Md_F2 LINE L1 504 5585 -298 2 647 7816 52 11 2 chr13 8158901 8159877 -112124435 + L1Md_F2 LINE L1 5587 6571 -11 2 647 294 239 21 21 chr13 8160272 8160366 -112123946 + CT-rich Low_complexity Low_complexity 2 95 0 2 647 232 308 0 90 chr13 8160411 8160511 -112123801 + MLT1E1 LTR MaLR 379 469 -185 2 647 231 314 136 15 chr13 8160700 8160863 -112123449 - MIRc SINE MIR -67 201 14 2 647 414 0 0 0 chr13 8160874 8160920 -112123392 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 647 402 349 64 64 chr13 8161356 8161589 -112122723 + B4 SINE B4 2 234 -58 2 647 219 36 0 0 chr13 8161650 8161678 -112122634 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 647 923 278 19 87 chr13 8162090 8162469 -112121843 - ORR1E LTR MaLR -4 355 3 2 647 500 0 17 0 chr13 8162724 8162784 -112121528 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 647 373 287 137 6 chr13 8162965 8163136 -112121176 + MT2A LTR ERVL 161 477 -124 2 647 241 272 25 42 chr13 8163148 8163267 -112121045 + MTC-int LTR MaLR 893 1009 -249 2 647 1987 85 11 7 chr13 8163289 8163573 -112120739 - L1_Mus3 LINE L1 -6 6632 6348 2 647 435 130 0 0 chr13 8163573 8163642 -112120670 + L1_Mus3 LINE L1 6291 6359 -279 2 647 303 298 67 0 chr13 8163646 8163770 -112120542 + MT2A LTR ERVL 454 601 0 2 647 2059 174 24 3 chr13 8163998 8164229 -112120083 + RLTR14 LTR ERV1 3 232 -150 2 647 450 0 0 0 chr13 8164229 8164279 -112120033 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 647 2059 174 24 3 chr13 8164279 8164417 -112119895 + RLTR14 LTR ERV1 233 379 -3 2 647 419 310 53 0 chr13 8164421 8164534 -112119778 + ID_B1 SINE B4 100 218 -6 2 647 638 137 0 17 chr13 8164586 8164705 -112119607 + G-rich Low_complexity Low_complexity 3 119 0 2 647 1257 85 0 0 chr13 8164715 8164891 -112119421 + (GGGGA)n Simple_repeat Simple_repeat 4 179 0 2 647 213 39 0 0 chr13 8164891 8164917 -112119395 + (GGAGA)n Simple_repeat Simple_repeat 1 26 0 2 647 535 356 26 36 chr13 8164983 8165178 -112119134 + ID_B1 SINE B4 1 193 -31 2 647 414 0 0 0 chr13 8165213 8165259 -112119053 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 647 3208 55 5 0 chr13 8165750 8166148 -112118164 - MTB LTR MaLR 0 400 1 2 647 33803 36 0 0 chr13 8166263 8171473 -112112839 + L1Md_T LINE L1 283 5589 -297 2 647 9040 5 0 0 chr13 8171473 8172509 -112111803 + L1Md_T LINE L1 5590 6585 0 2 647 204 125 0 0 chr13 8172930 8172962 -112111350 + (T)n Simple_repeat Simple_repeat 1 32 0 2 647 894 208 80 15 chr13 8173457 8173631 -112110681 + B3 SINE B2 1 188 -28 2 647 387 0 0 0 chr13 8173631 8173674 -112110638 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 647 894 208 80 15 chr13 8173674 8173699 -112110613 + B3 SINE B2 189 213 -3 2 647 358 257 111 161 chr13 8173981 8174143 -112110169 + RSINE1 SINE B4 12 165 0 2 647 559 297 112 76 chr13 8174218 8174469 -112109843 + B4A SINE B4 33 292 0 2 647 973 325 21 35 chr13 8175438 8175722 -112108590 + B4A SINE B4 7 286 -6 2 647 2421 108 0 36 chr13 8176095 8176480 -112107832 + Lx LINE L1 6282 6652 -2 2 647 1197 103 24 10 chr13 8176685 8176891 -112107421 + Lx LINE L1 6439 6647 -7 2 647 32226 86 17 8 chr13 8177870 8184059 -112100253 - L1Md_F2 LINE L1 -2 6580 333 2 647 247 190 17 0 chr13 8184134 8184192 -112100120 + L1MA4 LINE L1 5239 5297 -846 2 647 450 0 0 0 chr13 8184255 8184305 -112100007 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 647 236 290 85 11 chr13 8184305 8184493 -112099819 + L1MA4 LINE L1 5388 5589 -702 2 647 278 256 69 15 chr13 8184603 8184734 -112099578 + L1MA4 LINE L1 5787 5924 -376 2 647 597 40 0 0 chr13 8184745 8184821 -112099491 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 647 274 270 10 10 chr13 8184837 8184938 -112099374 + L1MA4 LINE L1 6002 6102 -198 2 647 751 263 24 28 chr13 8184938 8185149 -112099163 + B3 SINE B2 1 210 -6 2 647 272 232 43 128 chr13 8185149 8185245 -112099067 + L1MA6 LINE L1 6099 6182 -118 2 647 1407 190 180 22 chr13 8187030 8187347 -112096965 - ORR1B2 LTR MaLR 0 367 1 2 647 906 286 78 63 chr13 8187347 8187509 -112096803 - L1MC2 LINE L1 -145 6188 6014 2 647 997 236 5 5 chr13 8187509 8187705 -112096607 + B3 SINE B2 3 198 -18 2 647 306 0 0 0 chr13 8187705 8187739 -112096573 + (TAAAA)n Simple_repeat Simple_repeat 5 38 0 2 647 917 285 62 25 chr13 8187739 8188214 -112096098 - L1MC2 LINE L1 -320 6013 5540 2 647 271 346 76 56 chr13 8188206 8188494 -112095818 + Lx8 LINE L1 7171 7464 -9 2 647 342 0 0 0 chr13 8188513 8188551 -112095761 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 647 222 62 0 0 chr13 8189808 8189840 -112094472 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2 647 1191 194 20 104 chr13 8190264 8190666 -112093646 + Lx9 LINE L1 7258 7625 -19 2 647 38 61 0 0 chr13 8190667 8190733 -112093579 + AT_rich Low_complexity Low_complexity 1 66 0 2 647 1202 61 0 0 chr13 8190810 8190957 -112093355 + B1_Mus2 SINE Alu 1 147 0 2 647 192 125 0 0 chr13 8190957 8190989 -112093323 + (A)n Simple_repeat Simple_repeat 1 32 0 2 647 216 377 138 67 chr13 8192614 8192853 -112091459 + B4 SINE B4 20 275 -17 2 647 678 78 0 0 chr13 8192868 8192970 -112091342 + (TC)n Simple_repeat Simple_repeat 1 102 0 2 647 216 0 0 0 chr13 8192970 8192993 -112091319 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 647 203 139 47 0 chr13 8194126 8194169 -112090143 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 647 1047 59 0 0 chr13 8194859 8194994 -112089318 + (CA)n Simple_repeat Simple_repeat 2 136 0 2 647 503 375 24 9 chr13 8196101 8196311 -112088001 - ID_B1 SINE B4 0 224 12 2 647 288 0 0 0 chr13 8196400 8196432 -112087880 + (CATA)n Simple_repeat Simple_repeat 1 32 0 2 647 269 118 20 0 chr13 8197237 8197288 -112087024 + (CAGA)n Simple_repeat Simple_repeat 2 53 0 2 647 398 258 8 8 chr13 8197305 8197426 -112086886 + L1MA4A LINE L1 5822 5942 -361 2 647 189 0 0 0 chr13 8197499 8197520 -112086792 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 647 248 111 0 0 chr13 8200407 8200443 -112083869 - MIR SINE MIR -114 148 113 2 647 1192 61 0 0 chr13 8200486 8200634 -112083678 + B1_Mus1 SINE Alu 1 148 0 2 647 342 173 0 0 chr13 8201158 8201233 -112083079 + CT-rich Low_complexity Low_complexity 3 77 0 2 647 1138 90 0 11 chr13 8201240 8201420 -112082892 + (TCCC)n Simple_repeat Simple_repeat 3 180 0 2 647 189 321 0 0 chr13 8203872 8203928 -112080384 + L3 LINE CR1 4142 4197 -292 2 647 186 43 0 0 chr13 8204622 8204645 -112079667 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 647 268 23 68 0 chr13 8209401 8209445 -112074867 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2 647 1211 34 7 0 chr13 8209448 8209594 -112074718 - B1_Mus2 SINE Alu 0 147 1 2 647 360 0 0 0 chr13 8210325 8210365 -112073947 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 647 778 256 16 26 chr13 8212167 8212356 -112071956 + B3 SINE B2 1 187 -29 2 647 352 296 0 0 chr13 8214638 8214719 -112069593 + B3A SINE B2 4 84 -114 2 647 210 250 0 0 chr13 8215370 8215410 -112068902 + B4A SINE B4 30 69 -223 2 647 492 167 0 0 chr13 8215475 8215571 -112068741 + GA-rich Low_complexity Low_complexity 1 96 0 2 647 272 230 12 98 chr13 8215589 8215671 -112068641 + B4A SINE B4 218 292 0 2 647 679 330 35 104 chr13 8218193 8218596 -112065716 - MTE2a LTR MaLR -4 375 1 2 647 5894 70 23 1 chr13 8218627 8219413 -112064899 - L1Md_F2 LINE L1 -2 6580 5778 2 647 4838 87 3 0 chr13 8219413 8220092 -112064220 + L1Md_F2 LINE L1 5081 5761 -122 2 647 250 215 11 21 chr13 8221118 8221213 -112063099 + CT-rich Low_complexity Low_complexity 2 95 0 2 647 31 44 0 0 chr13 8221269 8221314 -112062998 + AT_rich Low_complexity Low_complexity 1 45 0 2 647 345 47 0 0 chr13 8221766 8221809 -112062503 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 647 390 21 0 0 chr13 8221895 8221942 -112062370 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 2 647 289 381 9 0 chr13 8222140 8222245 -112062067 - Tigger12 DNA MER2_type -2 1957 1852 2 647 1096 251 89 33 chr13 8223144 8223503 -112060809 + MTE2a LTR MaLR 1 379 0 2 647 351 240 27 0 chr13 8223718 8223793 -112060519 + ID SINE ID 2 78 -146 2 647 342 0 0 0 chr13 8224437 8224475 -112059837 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 2 647 21 0 0 0 chr13 8225047 8225068 -112059244 + AT_rich Low_complexity Low_complexity 1 21 0 2 647 369 0 0 0 chr13 8225213 8225254 -112059058 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 647 359 371 75 6 chr13 8225333 8225493 -112058819 - B4A SINE B4 -100 192 22 2 647 396 308 188 0 chr13 8225566 8225683 -112058629 - RSINE1 SINE B4 -25 140 2 3 647 360 0 0 0 chr13 8227804 8227844 -112056468 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 647 24 53 0 0 chr13 8228618 8228656 -112055656 + AT_rich Low_complexity Low_complexity 1 38 0 3 647 486 284 27 34 chr13 8228665 8228811 -112055501 - B3 SINE B2 -6 210 66 3 647 498 17 0 0 chr13 8228811 8228870 -112055442 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 3 647 1701 251 35 19 chr13 8230286 8230713 -112053599 + Lx5 LINE L1 6610 7043 -7 3 647 3875 89 31 70 chr13 8230725 8231016 -112053296 + Lx3_Mus LINE L1 6417 6697 -312 3 647 1093 97 0 0 chr13 8231016 8231161 -112053151 - B1_Mus1 SINE Alu -2 146 2 3 647 3875 89 31 70 chr13 8231161 8231486 -112052826 + Lx3_Mus LINE L1 6698 7009 0 3 647 427 346 13 0 chr13 8231777 8231933 -112052379 + Lx8 LINE L1 7163 7320 -153 3 647 858 64 40 23 chr13 8231952 8232127 -112052185 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 3 647 243 0 0 0 chr13 8232131 8232158 -112052154 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 647 6782 88 4 1 chr13 8232173 8233135 -112051177 - L1_Mus1 LINE L1 -162 5721 4757 3 647 6403 73 0 1 chr13 8233127 8233982 -112050330 + L1_Mus1 LINE L1 5714 6567 0 3 647 533 56 44 0 chr13 8234015 8234105 -112050207 + (TAGA)n Simple_repeat Simple_repeat 3 96 0 3 647 1057 95 0 7 chr13 8234440 8234578 -112049734 + B1_Mus1 SINE Alu 2 138 -10 3 647 222 37 0 0 chr13 8234578 8234605 -112049707 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 647 276 215 45 43 chr13 8235808 8235937 -112048375 + Lx6 LINE L1 7309 7404 -56 3 647 23 0 0 0 chr13 8235937 8235960 -112048352 + AT_rich Low_complexity Low_complexity 1 23 0 3 647 243 0 0 0 chr13 8236143 8236170 -112048142 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 647 286 293 65 32 chr13 8236251 8236406 -112047906 + Charlie16a DNA MER1_type 92 251 -91 3 647 207 0 0 0 chr13 8236727 8236750 -112047562 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 647 384 22 0 0 chr13 8237602 8237647 -112046665 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 647 474 170 0 0 chr13 8237647 8237741 -112046571 + (TG)n Simple_repeat Simple_repeat 2 95 0 3 647 670 254 18 0 chr13 8238008 8238177 -112046135 - Lx8 LINE L1 -497 6976 6805 3 647 595 308 35 39 chr13 8238205 8238465 -112045847 + Lx8 LINE L1 7047 7305 -168 3 647 186 316 0 17 chr13 8238771 8238829 -112045483 + L3b LINE CR1 209 265 -217 3 647 754 97 0 24 chr13 8238913 8239040 -112045272 - L1Md_A LINE L1 -2 6580 6457 3 647 268 301 24 35 chr13 8239106 8239275 -112045037 + (CATATA)n Simple_repeat Simple_repeat 6 172 0 3 647 270 0 0 0 chr13 8240841 8240871 -112043441 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 3 647 3863 52 2 0 chr13 8241419 8241896 -112042416 - L1Md_F2 LINE L1 -5 6577 6100 3 647 585 0 0 0 chr13 8242166 8242231 -112042081 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 647 398 327 78 7 chr13 8242382 8242536 -112041776 - B3A SINE B2 -7 191 27 3 647 1173 62 0 0 chr13 8242579 8242725 -112041587 - B1_Mm SINE Alu 0 147 2 3 647 189 0 0 0 chr13 8242970 8242991 -112041321 + (T)n Simple_repeat Simple_repeat 1 21 0 3 647 385 315 36 72 chr13 8243225 8243420 -112040892 + RMER30 DNA MER1_type 12 199 -3 3 647 240 227 33 22 chr13 8243544 8243638 -112040674 - L1M4 LINE L1 -524 5650 5555 3 647 223 336 9 0 chr13 8243768 8243881 -112040431 + CT-rich Low_complexity Low_complexity 2 115 0 3 647 640 335 0 26 chr13 8245221 8245377 -112038935 + B3 SINE B2 12 163 -53 3 647 22 56 0 0 chr13 8245401 8245437 -112038875 + AT_rich Low_complexity Low_complexity 1 36 0 3 647 1248 181 14 0 chr13 8245544 8245765 -112038547 + URR1B DNA MER1_type 1 224 -1 3 647 23 0 0 0 chr13 8247247 8247270 -112037042 + AT_rich Low_complexity Low_complexity 1 23 0 3 647 583 355 65 19 chr13 8247970 8248231 -112036081 + B4A SINE B4 2 274 -18 3 647 506 358 16 28 chr13 8248684 8248934 -112035378 - Lx8 LINE L1 -78 7395 7149 3 647 239 215 15 0 chr13 8249396 8249461 -112034851 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 647 210 91 0 0 chr13 8250007 8250040 -112034272 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 647 279 0 0 0 chr13 8252253 8252284 -112032028 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 3 647 541 323 72 34 chr13 8252454 8252664 -112031648 + B4 SINE B4 2 221 -71 3 647 542 15 15 0 chr13 8252664 8252731 -112031581 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 3 647 541 323 72 34 chr13 8252731 8252783 -112031529 + B4 SINE B4 222 273 -19 3 647 423 0 0 0 chr13 8252809 8252856 -112031456 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 647 493 318 62 11 chr13 8253201 8253379 -112030933 - MIR3 SINE MIR -7 201 15 3 647 251 329 73 103 chr13 8253870 8254131 -112030181 - ORR1E LTR MaLR -11 348 96 3 647 724 164 23 0 chr13 8254720 8254848 -112029464 - MER94 DNA AcHobo 0 134 4 3 647 405 289 122 40 chr13 8255520 8255668 -112028644 - B4 SINE B4 -13 279 120 3 647 616 182 27 22 chr13 8255714 8255899 -112028413 - Lx9 LINE L1 -1 7643 7458 3 647 427 167 19 19 chr13 8255903 8256007 -112028305 + (CATA)n Simple_repeat Simple_repeat 3 106 0 3 647 208 0 62 0 chr13 8257363 8257395 -112026917 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 648 447 296 223 25 chr13 8258936 8259177 -112025135 - B4 SINE B4 -2 290 1 3 648 579 306 49 0 chr13 8260918 8261062 -112023250 + RSINE1 SINE B4 11 161 -4 3 648 333 118 0 0 chr13 8261853 8261904 -112022408 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 648 192 97 0 0 chr13 8264130 8264161 -112020151 + (CAA)n Simple_repeat Simple_repeat 2 32 0 3 648 351 318 75 51 chr13 8265091 8265346 -112018966 - Tigger15a DNA TcMar -150 565 305 3 648 248 53 0 0 chr13 8265621 8265668 -112018644 - L1_Mus1 LINE L1 0 6567 6527 3 648 432 51 0 0 chr13 8265854 8265913 -112018399 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 648 432 0 0 0 chr13 8265913 8265960 -112018352 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 648 6125 59 12 11 chr13 8266840 8267668 -112016644 - IAPEz-int LTR ERVK -2 6479 5651 3 648 2556 64 0 3 chr13 8267661 8268004 -112016308 - IAPEz-int LTR ERVK -4781 1700 1359 3 648 3989 66 2 18 chr13 8268004 8268588 -112015724 - IAPEz-int LTR ERVK -5819 662 116 3 648 226 327 0 0 chr13 8268588 8268643 -112015669 - RLTR27 LTR ERVK -34 275 221 3 648 1076 104 10 80 chr13 8268643 8268842 -112015470 - IAPEz-int LTR ERVK -6288 193 9 3 648 2431 89 80 18 chr13 8268843 8269230 -112015082 - IAPLTR2a LTR ERVK 0 411 1 3 648 1047 314 68 19 chr13 8269502 8270252 -112014060 - L1MA5 LINE L1 0 6300 5514 3 648 494 316 48 19 chr13 8272285 8272495 -112011817 + MIRb SINE MIR 22 237 -31 3 648 499 302 65 25 chr13 8272619 8272941 -112011371 + L1MC1 LINE L1 5709 6043 -290 3 648 430 293 44 112 chr13 8273203 8273453 -112010859 + B4A SINE B4 4 236 -56 3 648 3915 66 20 0 chr13 8273477 8273995 -112010317 - L1Md_F2 LINE L1 0 6582 6069 3 648 934 194 6 6 chr13 8274699 8274870 -112009442 - URR1B DNA MER1_type -50 175 5 3 648 393 136 0 0 chr13 8275189 8275255 -112009057 + (CATA)n Simple_repeat Simple_repeat 2 67 0 3 648 351 0 0 0 chr13 8275323 8275362 -112008950 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 648 734 166 29 0 chr13 8275362 8275501 -112008811 - Lx9 LINE L1 -188 7456 7314 3 648 239 263 48 39 chr13 8275865 8275968 -112008344 - MT2B LTR ERVL -168 433 330 3 648 437 254 189 40 chr13 8277607 8277808 -112006504 - RMER15 LTR ERVL 0 575 345 3 648 231 214 0 0 chr13 8278476 8278532 -112005780 + A-rich Low_complexity Low_complexity 1 56 0 3 648 1298 85 319 3 chr13 8279060 8279364 -112004948 - MTB LTR MaLR 0 400 1 3 648 590 319 60 12 chr13 8280378 8280546 -112003766 + ID_B1 SINE B4 17 192 -32 3 648 281 256 144 43 chr13 8281179 8281318 -112002994 - MLT1B LTR MaLR -34 356 204 3 648 1111 66 0 0 chr13 8283138 8283275 -112001037 + B1_Mus2 SINE Alu 2 138 -9 3 648 198 0 0 0 chr13 8283361 8283383 -112000929 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 3 648 699 316 84 8 chr13 8283962 8284457 -111999855 - Lx9 LINE L1 -105 7539 6876 3 648 255 344 8 0 chr13 8286274 8286445 -111997867 + (TTGGGG)n Simple_repeat Simple_repeat 1 172 0 3 648 23 0 0 0 chr13 8286577 8286600 -111997712 + AT_rich Low_complexity Low_complexity 1 23 0 3 648 5770 41 1 11 chr13 8287568 8288284 -111996028 - L1Md_F3 LINE L1 -14 6570 5862 3 648 6973 55 4 0 chr13 8289384 8290305 -111994007 - L1_Mm LINE L1 -11 5872 4948 3 648 596 67 0 11 chr13 8291068 8291159 -111993153 + (TG)n Simple_repeat Simple_repeat 1 90 0 3 648 1010 279 17 14 chr13 8291167 8291458 -111992854 - B4A SINE B4 0 292 1 3 648 749 341 100 4 chr13 8292009 8292259 -111992053 + B4A SINE B4 15 288 -4 3 648 254 192 57 9 chr13 8292259 8292364 -111991948 + A-rich Low_complexity Low_complexity 3 112 0 3 648 429 141 0 0 chr13 8292794 8292865 -111991447 + (TTTTC)n Simple_repeat Simple_repeat 2 72 0 3 648 441 0 0 0 chr13 8293620 8293669 -111990643 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 648 32545 85 15 6 chr13 8293873 8300008 -111984304 - L1Md_F2 LINE L1 -2 6580 389 3 648 21 0 0 0 chr13 8300345 8300366 -111983946 + AT_rich Low_complexity Low_complexity 1 21 0 3 648 7851 14 1 3 chr13 8300788 8301737 -111982575 - L1Md_T LINE L1 0 6582 5660 3 648 5742 94 28 15 chr13 8301922 8302787 -111981525 - Lx3_Mus LINE L1 -3 7006 6131 3 648 300 102 0 0 chr13 8303288 8303337 -111980975 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 648 206 261 109 0 chr13 8303868 8303914 -111980398 + L3 LINE CR1 4337 4387 -102 3 648 599 129 16 39 chr13 8303940 8304069 -111980243 + Lx6 LINE L1 7331 7456 -4 3 648 1036 229 139 9 chr13 8305884 8306215 -111978097 - ORR1D1 LTR MaLR 0 374 1 4 648 264 311 37 28 chr13 8306221 8306330 -111977982 - B1F2 SINE Alu -13 136 27 4 648 487 324 169 11 chr13 8306403 8306581 -111977731 - B4A SINE B4 -86 206 1 4 648 783 279 15 5 chr13 8306971 8307176 -111977136 + ID_B1 SINE B4 3 209 -15 4 648 417 349 31 31 chr13 8308176 8308466 -111975846 - B4A SINE B4 -2 290 1 4 648 590 189 0 7 chr13 8309107 8309394 -111974918 + (TG)n Simple_repeat Simple_repeat 1 284 0 4 648 303 140 0 0 chr13 8309396 8309446 -111974866 - HAL1-3A_ME LINE L1 -835 2023 1974 4 648 486 169 0 0 chr13 8309447 8309565 -111974747 + (TG)n Simple_repeat Simple_repeat 1 118 0 4 648 792 255 117 23 chr13 8309565 8309830 -111974482 - B4A SINE B4 0 292 3 4 648 317 256 65 53 chr13 8312288 8312457 -111971855 - RLTR42-int LTR ERVK -4196 1326 1156 4 648 390 312 102 54 chr13 8312549 8312901 -111971411 + RLTR12B LTR ERVK 27 395 -133 4 648 26 0 0 0 chr13 8312939 8312965 -111971347 + AT_rich Low_complexity Low_complexity 1 26 0 4 648 706 267 102 10 chr13 8314890 8315087 -111969225 + B3 SINE B2 2 216 0 4 648 718 251 31 41 chr13 8315182 8315376 -111968936 + B3A SINE B2 1 186 -9 4 648 509 328 104 58 chr13 8316774 8317052 -111967260 + B4 SINE B4 2 292 0 4 648 185 163 0 44 chr13 8317058 8317103 -111967209 + GA-rich Low_complexity Low_complexity 3 45 0 4 648 1305 71 0 0 chr13 8317675 8317902 -111966410 + (TG)n Simple_repeat Simple_repeat 1 227 0 4 648 367 276 130 0 chr13 8319259 8319382 -111964930 - B1F SINE Alu -8 141 3 4 648 339 239 0 14 chr13 8319983 8320055 -111964257 + tRNA-Ala-GCY_ tRNA tRNA 3 73 -2 4 648 21 0 0 0 chr13 8320103 8320124 -111964188 + AT_rich Low_complexity Low_complexity 1 21 0 4 648 1000 281 50 25 chr13 8320239 8320520 -111963792 - B4 SINE B4 -2 290 3 4 648 22 0 0 0 chr13 8320736 8320758 -111963554 + AT_rich Low_complexity Low_complexity 1 22 0 4 648 490 358 15 15 chr13 8321014 8321343 -111962969 - L1MEc LINE L1 -462 5889 5561 4 648 618 306 27 76 chr13 8321351 8321574 -111962738 - B3 SINE B2 -2 214 3 4 648 426 346 73 29 chr13 8321585 8321927 -111962385 - L1MEc LINE L1 -1610 4709 4353 4 648 434 333 32 36 chr13 8322030 8322288 -111962024 - L1MEc LINE L1 -3821 2498 2245 4 648 715 289 137 48 chr13 8322698 8323159 -111961153 - Lx9 LINE L1 -22 7622 7121 4 648 626 41 20 30 chr13 8323424 8323525 -111960787 - L1_Mus2 LINE L1 0 6566 6467 4 648 194 0 0 37 chr13 8324566 8324593 -111959719 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 648 645 240 0 15 chr13 8325420 8325551 -111958761 - B1F2 SINE Alu -2 147 19 4 648 466 301 27 40 chr13 8325551 8325569 -111958743 - ID_B1 SINE B4 0 224 78 4 648 1067 75 0 6 chr13 8325787 8325947 -111958365 + L1_Mus4 LINE L1 6477 6635 -1 4 648 243 0 0 0 chr13 8327175 8327202 -111957110 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 648 1049 273 102 50 chr13 8327869 8328308 -111956004 - MT2A LTR ERVL -71 462 1 4 648 1737 37 0 36 chr13 8328364 8328588 -111955724 + L1_Mus2 LINE L1 6351 6566 0 4 648 201 164 31 47 chr13 8328598 8328662 -111955650 + A-rich Low_complexity Low_complexity 3 65 0 4 648 614 162 8 0 chr13 8328821 8328938 -111955374 + (TA)n Simple_repeat Simple_repeat 2 119 0 4 648 685 166 15 0 chr13 8329839 8330191 -111954121 + GA-rich Low_complexity Low_complexity 1 357 0 4 648 414 0 0 0 chr13 8330338 8330384 -111953928 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 648 521 270 204 56 chr13 8330407 8330603 -111953709 - B4 SINE B4 -53 239 15 4 648 462 18 0 0 chr13 8330835 8330890 -111953422 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 648 216 0 0 0 chr13 8330890 8330913 -111953399 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 648 221 114 45 0 chr13 8331489 8331533 -111952779 + A-rich Low_complexity Low_complexity 2 47 0 4 648 282 116 0 0 chr13 8335117 8335160 -111949152 + (A)n Simple_repeat Simple_repeat 1 43 0 4 648 435 19 0 0 chr13 8335313 8335365 -111948947 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 648 330 263 122 41 chr13 8335436 8335559 -111948753 - B1_Mus2 SINE Alu -13 134 2 4 648 363 44 0 0 chr13 8335657 8335702 -111948610 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 4 648 209 208 0 20 chr13 8335893 8335942 -111948370 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 648 512 331 0 0 chr13 8336932 8337062 -111947250 + RSINE1 SINE B4 3 132 -33 4 648 24 0 0 0 chr13 8337465 8337489 -111946823 + AT_rich Low_complexity Low_complexity 1 24 0 4 648 235 254 31 16 chr13 8337561 8337625 -111946687 + PB1D7 SINE Alu 27 91 -29 4 648 249 109 0 0 chr13 8338235 8338281 -111946031 + (TTAG)n Simple_repeat Simple_repeat 3 48 0 4 648 388 314 0 67 chr13 8339502 8339652 -111944660 - MTEa LTR MaLR -239 140 1 4 648 198 71 0 0 chr13 8339976 8340004 -111944308 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4 648 349 331 32 32 chr13 8340897 8341053 -111943259 - MIRb SINE MIR -48 220 65 4 648 934 321 84 0 chr13 8341465 8341727 -111942585 - B4A SINE B4 -1 291 8 4 648 795 247 16 11 chr13 8341783 8341967 -111942345 + Lx6 LINE L1 7268 7452 -8 4 648 190 318 93 12 chr13 8342412 8342498 -111941814 - MIRc SINE MIR -55 213 121 4 648 376 229 73 0 chr13 8343162 8343258 -111941054 - MTEa LTR MaLR -276 103 1 4 648 739 295 87 8 chr13 8343704 8343957 -111940355 + B4A SINE B4 2 274 -18 4 648 434 120 13 0 chr13 8343969 8344044 -111940268 + (CA)n Simple_repeat Simple_repeat 2 77 0 4 648 543 68 32 64 chr13 8345327 8345483 -111938829 + (TTATA)n Simple_repeat Simple_repeat 4 154 0 4 648 277 172 80 10 chr13 8345503 8345603 -111938709 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 648 26 0 0 0 chr13 8345651 8345677 -111938635 + AT_rich Low_complexity Low_complexity 1 26 0 4 648 21 36 0 0 chr13 8347302 8347330 -111936982 + AT_rich Low_complexity Low_complexity 1 28 0 4 648 857 113 7 0 chr13 8348045 8348186 -111936126 + (TG)n Simple_repeat Simple_repeat 1 142 0 4 648 449 62 0 15 chr13 8348186 8348252 -111936060 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 648 681 13 0 0 chr13 8348659 8348737 -111935575 + (TC)n Simple_repeat Simple_repeat 1 78 0 4 648 405 0 0 0 chr13 8348737 8348781 -111935531 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 648 677 346 7 39 chr13 8348941 8349236 -111935076 + B4 SINE B4 16 292 0 4 648 618 288 111 6 chr13 8349310 8349625 -111934687 - L1MA9 LINE L1 -30 6282 5935 4 648 340 274 19 19 chr13 8353476 8353584 -111930728 + (CATATA)n Simple_repeat Simple_repeat 1 108 0 4 648 1017 90 67 0 chr13 8353775 8353909 -111930403 + B1_Mus1 SINE Alu 1 143 -5 4 648 447 19 0 0 chr13 8353916 8353968 -111930344 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 648 205 174 43 0 chr13 8354066 8354112 -111930200 + A-rich Low_complexity Low_complexity 2 49 0 4 648 843 182 7 0 chr13 8354239 8354376 -111929936 - B1_Mus1 SINE Alu -9 139 2 4 648 21 36 0 0 chr13 8355232 8355260 -111929052 + AT_rich Low_complexity Low_complexity 1 28 0 4 648 480 321 7 0 chr13 8356343 8356483 -111927829 + B4 SINE B4 77 217 -75 4 648 331 392 0 6 chr13 8356491 8356650 -111927662 + (CA)n Simple_repeat Simple_repeat 1 158 0 4 648 630 39 0 0 chr13 8356697 8356774 -111927538 + (GGGGA)n Simple_repeat Simple_repeat 5 81 0 4 648 222 286 0 0 chr13 8356965 8357014 -111927298 - B4A SINE B4 -242 50 2 4 648 257 352 49 6 chr13 8357016 8357179 -111927133 - L1MC LINE L1 -641 5692 5523 4 648 447 19 0 0 chr13 8357400 8357452 -111926860 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 648 342 0 0 0 chr13 8357452 8357489 -111926823 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 648 1528 292 30 44 chr13 8357491 8358085 -111926227 - Lx9 LINE L1 -184 7460 6875 4 648 1901 249 178 24 chr13 8358087 8358306 -111926006 - L1MC LINE L1 -756 5390 5159 4 648 2477 119 5 22 chr13 8358306 8358675 -111925637 - L1_Mus3 LINE L1 -1 6637 6275 4 648 1901 249 178 24 chr13 8358675 8359320 -111924992 - L1MC LINE L1 -988 5158 4394 4 648 244 318 0 0 chr13 8359826 8359889 -111924423 + ID4 SINE ID 2 64 -19 4 648 3187 196 219 19 chr13 8359926 8361159 -111923153 + Lx9 LINE L1 6157 7636 -8 4 648 288 224 0 0 chr13 8361558 8361616 -111922696 - Lx9 LINE L1 -247 7397 7340 4 648 294 73 0 0 chr13 8361682 8361723 -111922589 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 648 279 0 0 0 chr13 8361760 8361791 -111922521 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 648 180 0 0 0 chr13 8361791 8361810 -111922502 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 648 988 233 288 40 chr13 8361814 8362203 -111922109 - RLTR20C LTR ERVK -66 485 1 4 648 286 309 215 51 chr13 8362350 8362527 -111921785 - B4 SINE B4 -3 289 84 4 648 198 191 0 0 chr13 8363244 8363286 -111921026 + (CATA)n Simple_repeat Simple_repeat 1 42 0 4 648 920 319 135 2 chr13 8363936 8364491 -111919821 + L1MC1 LINE L1 5687 6315 -18 4 648 441 0 0 0 chr13 8365870 8365919 -111918393 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 648 545 298 49 132 chr13 8365974 8366299 -111918013 - ORR1E LTR MaLR -52 307 10 4 648 912 189 206 0 chr13 8366672 8366900 -111917412 - RMER1C Other Other 0 1342 1068 4 648 669 162 17 0 chr13 8366911 8367028 -111917284 + RMER1C Other Other 833 951 -391 4 648 3995 100 21 2 chr13 8367057 8367589 -111916723 + L1_Mus3 LINE L1 6091 6632 -6 4 648 3879 116 0 5 chr13 8367609 8368166 -111916146 + Lx2 LINE L1 6092 6645 -352 4 648 1392 111 18 5 chr13 8368165 8368382 -111915930 + Lx2 LINE L1 6776 6995 -2 4 648 445 170 55 140 chr13 8368389 8368553 -111915759 + RMER1C Other Other 942 1091 -251 4 648 371 281 105 28 chr13 8368579 8368722 -111915590 - MLT1B LTR MaLR -201 189 36 4 648 812 314 127 22 chr13 8370004 8370365 -111913947 + MTD LTR MaLR 19 417 -2 5 648 12547 24 0 0 chr13 8371903 8373340 -111910972 + L1Md_T LINE L1 4150 5586 -297 5 648 9592 5 0 0 chr13 8373340 8374336 -111909976 + L1Md_T LINE L1 5587 6582 0 5 648 4424 63 38 30 chr13 8374342 8374824 -111909488 + L1Md_F2 LINE L1 6005 6481 -101 5 648 229 51 51 0 chr13 8374824 8374863 -111909449 + (TGGG)n Simple_repeat Simple_repeat 1 41 0 5 648 4424 63 38 30 chr13 8374863 8374953 -111909359 + L1Md_F2 LINE L1 6482 6580 -2 5 648 430 257 10 0 chr13 8375048 8375149 -111909163 + PB1D10 SINE Alu 11 112 -5 5 648 567 263 119 19 chr13 8375591 8375750 -111908562 + B3A SINE B2 2 176 -22 5 648 313 330 9 0 chr13 8376827 8376933 -111907379 - Lx8 LINE L1 -169 7304 7198 5 648 329 62 21 0 chr13 8377360 8377408 -111906904 + (TC)n Simple_repeat Simple_repeat 1 49 0 5 648 785 246 38 110 chr13 8378182 8378419 -111905893 - ID_B1 SINE B4 -4 220 1 5 648 184 288 0 64 chr13 8378459 8378537 -111905775 + MIRm SINE MIR 77 149 -127 5 648 988 277 20 31 chr13 8378688 8378982 -111905330 + B4A SINE B4 1 291 -1 5 648 21 57 0 0 chr13 8379716 8379751 -111904561 + AT_rich Low_complexity Low_complexity 1 35 0 5 648 216 0 0 0 chr13 8380054 8380078 -111904234 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 5 648 937 47 16 0 chr13 8380469 8380596 -111903716 + (TAGA)n Simple_repeat Simple_repeat 4 132 0 5 648 222 305 13 19 chr13 8380885 8380982 -111903330 + CT-rich Low_complexity Low_complexity 1 96 0 5 648 2967 205 74 9 chr13 8381001 8381675 -111902637 - Lx9 LINE L1 -1 7643 6926 5 648 1223 274 58 3 chr13 8381744 8382037 -111902275 + MTE2b LTR MaLR 1 309 -70 5 648 453 218 101 55 chr13 8382055 8382273 -111902039 + Charlie5 DNA MER1_type 2394 2621 -3 5 648 2234 183 20 12 chr13 8382326 8382730 -111901582 + MTB_Mm LTR MaLR 1 407 0 5 648 271 344 130 48 chr13 8385008 8385386 -111898926 - L2 LINE L2 -966 2453 2045 5 648 303 357 39 25 chr13 8385710 8385989 -111898323 - L2 LINE L2 -1920 1499 1217 5 648 210 256 73 62 chr13 8386046 8386142 -111898170 - ID_B1 SINE B4 -58 166 70 5 648 323 256 39 0 chr13 8386271 8386356 -111897956 - PB1D9 SINE Alu -20 100 10 5 648 399 41 0 0 chr13 8386553 8386602 -111897710 + (CTA)n Simple_repeat Simple_repeat 1 49 0 5 648 297 0 0 0 chr13 8386602 8386635 -111897677 + (TAA)n Simple_repeat Simple_repeat 3 35 0 5 648 958 62 78 0 chr13 8386800 8386929 -111897383 - B1_Mm SINE Alu 0 147 9 5 648 276 307 10 19 chr13 8387008 8387111 -111897201 - LTR33A_ LTR ERVL -8 523 422 5 649 1240 56 0 0 chr13 8390229 8390372 -111893940 + B1_Mm SINE Alu 5 147 0 5 649 225 0 0 0 chr13 8390372 8390397 -111893915 + (A)n Simple_repeat Simple_repeat 1 25 0 5 649 1013 100 0 0 chr13 8390860 8390990 -111893322 + B1_Mus2 SINE Alu 1 130 -17 5 649 961 39 15 0 chr13 8390991 8391121 -111893191 + (TC)n Simple_repeat Simple_repeat 1 132 0 5 649 270 155 94 0 chr13 8391121 8391186 -111893126 + ORR1D1 LTR MaLR 196 268 -116 5 649 340 351 109 58 chr13 8391634 8391927 -111892385 + ORR1E LTR MaLR 6 313 -46 5 649 516 32 0 0 chr13 8392592 8392654 -111891658 + (TG)n Simple_repeat Simple_repeat 2 63 0 5 649 198 167 0 0 chr13 8392862 8392898 -111891414 + CT-rich Low_complexity Low_complexity 4 39 0 5 649 250 261 11 43 chr13 8393808 8393900 -111890412 + C-rich Low_complexity Low_complexity 5 93 0 5 649 453 36 0 0 chr13 8394246 8394301 -111890011 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 649 197 333 76 17 chr13 8394376 8394495 -111889817 + L2 LINE L2 1937 2062 -1357 5 649 674 332 127 10 chr13 8394886 8395288 -111889024 - MER77 LTR ERVL 0 607 159 5 649 423 0 0 0 chr13 8395424 8395471 -111888841 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 649 830 227 173 17 chr13 8395475 8395712 -111888600 - B4 SINE B4 -17 275 2 5 649 761 154 7 0 chr13 8395993 8396136 -111888176 + CT-rich Low_complexity Low_complexity 2 145 0 5 649 230 298 11 56 chr13 8396158 8396247 -111888065 + polypyrimidine Low_complexity Low_complexity 2 86 0 5 649 283 242 15 0 chr13 8396159 8396225 -111888087 + CT-rich Low_complexity Low_complexity 1 67 0 5 649 986 90 6 0 chr13 8397044 8397200 -111887112 + (TTTC)n Simple_repeat Simple_repeat 4 160 0 5 649 870 174 8 0 chr13 8397607 8397739 -111886573 - B1_Mus1 SINE Alu -15 133 1 5 649 229 217 100 0 chr13 8398003 8398063 -111886249 + MLT1A0 LTR MaLR 48 113 -252 5 649 2798 144 22 126 chr13 8398116 8398737 -111885575 + RLTR31B_Mm LTR ERVK 1 557 0 5 649 207 167 80 36 chr13 8399055 8399167 -111885145 + (TA)n Simple_repeat Simple_repeat 1 117 0 5 649 1312 275 26 28 chr13 8399869 8400221 -111884091 + MTE2b LTR MaLR 18 368 -11 5 649 282 87 0 0 chr13 8402620 8402666 -111881646 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 649 470 291 77 72 chr13 8404247 8404469 -111879843 - MLT1B LTR MaLR -16 374 136 5 649 704 340 38 19 chr13 8405876 8406089 -111878223 + MTEa LTR MaLR 4 220 -159 5 649 1214 90 6 0 chr13 8406090 8406268 -111878044 + (TCC)n Simple_repeat Simple_repeat 2 180 0 5 649 561 30 0 0 chr13 8406268 8406335 -111877977 + (TTC)n Simple_repeat Simple_repeat 3 69 0 5 649 384 22 0 0 chr13 8406332 8406377 -111877935 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 649 284 206 16 16 chr13 8406458 8406522 -111877790 + MTEa LTR MaLR 315 378 -1 5 649 342 0 0 0 chr13 8406707 8406745 -111877567 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 649 33 25 0 0 chr13 8407364 8407404 -111876908 + AT_rich Low_complexity Low_complexity 1 40 0 5 649 195 42 0 0 chr13 8408263 8408287 -111876025 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 5 649 362 38 0 19 chr13 8408287 8408340 -111875972 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 5 649 982 234 76 46 chr13 8408361 8408665 -111875647 - Lx6 LINE L1 0 7460 7148 5 649 717 200 0 0 chr13 8408666 8408786 -111875526 + B1_Mus1 SINE Alu 28 147 -1 5 649 1230 237 135 92 chr13 8410680 8411187 -111873125 + MT2B LTR ERVL 1 507 -94 5 649 459 0 0 0 chr13 8411187 8411238 -111873074 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 649 1230 237 135 92 chr13 8411238 8411306 -111873006 + MT2B LTR ERVL 508 600 -1 5 649 2620 173 34 50 chr13 8412703 8412837 -111871475 + RLTR11A LTR ERVK 1 130 -398 5 649 201 74 0 0 chr13 8412837 8412864 -111871448 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 649 3539 92 29 2 chr13 8412864 8413319 -111870993 - Lx3A LINE L1 -13 6968 6502 5 649 2620 173 34 50 chr13 8413319 8413720 -111870592 + RLTR11A LTR ERVK 131 527 -1 5 649 2645 44 18 61 chr13 8413757 8414099 -111870213 + IAPLTR2b LTR ERVK 1 327 0 5 649 917 287 41 41 chr13 8414140 8414431 -111869881 + B4A SINE B4 2 292 0 5 649 7134 114 17 13 chr13 8417332 8418694 -111865618 - Lx LINE L1 0 6654 5288 5 649 7717 82 102 0 chr13 8418702 8419955 -111864357 - L1_Mus1 LINE L1 0 6567 5044 5 649 601 288 37 32 chr13 8421044 8421234 -111863078 + B3A SINE B2 1 191 -7 5 649 328 313 152 47 chr13 8421443 8421614 -111862698 - MER20 DNA MER1_type -1 218 30 5 649 24 53 0 0 chr13 8421741 8421779 -111862533 + AT_rich Low_complexity Low_complexity 1 38 0 5 649 3214 69 10 18 chr13 8422573 8422972 -111861340 + MTA_Mm LTR MaLR 1 396 0 5 649 29 47 0 0 chr13 8424230 8424273 -111860039 + AT_rich Low_complexity Low_complexity 1 43 0 5 649 7195 30 14 2 chr13 8424437 8425249 -111859063 + L1Md_F2 LINE L1 5759 6579 -3 5 649 248 292 62 0 chr13 8425285 8425381 -111858931 + L1M2 LINE L1 5517 5618 -679 5 649 976 230 48 24 chr13 8426982 8427191 -111857121 - B3 SINE B2 -1 215 2 5 649 324 200 0 0 chr13 8427375 8427450 -111856862 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 649 474 18 0 0 chr13 8427670 8427725 -111856587 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 649 237 263 13 13 chr13 8428049 8428126 -111856186 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 5 649 314 279 24 16 chr13 8429678 8429787 -111854525 + (TA)n Simple_repeat Simple_repeat 1 112 0 5 649 351 0 0 0 chr13 8429787 8429826 -111854486 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 649 314 279 24 16 chr13 8429826 8429840 -111854472 + (TA)n Simple_repeat Simple_repeat 2 14 0 5 649 450 0 0 0 chr13 8429972 8430022 -111854290 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 649 1069 116 14 0 chr13 8430270 8430416 -111853896 - B1_Mus1 SINE Alu 0 148 1 5 649 3245 86 4 24 chr13 8430599 8431054 -111853258 - L1_Mus3 LINE L1 0 6638 6193 5 649 3894 91 0 17 chr13 8431054 8431590 -111852722 + L1_Mus3 LINE L1 5702 6228 -410 5 649 980 264 71 71 chr13 8432007 8432304 -111852008 - MTEa LTR MaLR 0 379 83 5 649 270 136 0 0 chr13 8432304 8432348 -111851964 + (A)n Simple_repeat Simple_repeat 1 44 0 5 649 269 232 0 0 chr13 8432369 8432425 -111851887 - MTEa LTR MaLR -323 56 1 5 649 275 342 13 0 chr13 8432454 8432533 -111851779 + PB1D10 SINE Alu 31 110 -7 5 649 254 309 86 81 chr13 8432984 8433181 -111851131 - MIRm SINE MIR -4 272 75 5 649 368 281 65 73 chr13 8433426 8433549 -111850763 - MTE2a LTR MaLR -70 309 188 5 649 4015 206 53 57 chr13 8433550 8434562 -111849750 + Lx9 LINE L1 6620 7627 -17 5 649 704 259 57 0 chr13 8434565 8434723 -111849589 - MTE2a LTR MaLR -161 218 52 5 649 398 284 0 0 chr13 8434721 8434816 -111849496 - MTE2a LTR MaLR -284 95 1 5 649 21 36 0 0 chr13 8434947 8434975 -111849337 + AT_rich Low_complexity Low_complexity 1 28 0 5 649 274 320 9 85 chr13 8435230 8435336 -111848976 + RSINE1 SINE B4 4 101 -64 5 649 915 123 18 0 chr13 8435380 8435543 -111848769 + (TC)n Simple_repeat Simple_repeat 2 167 0 5 649 470 323 145 28 chr13 8436987 8437242 -111847070 + B4 SINE B4 1 285 -7 5 649 247 260 0 0 chr13 8437263 8437313 -111846999 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 649 582 286 62 0 chr13 8438364 8438588 -111845724 - L1MA7 LINE L1 -1 6290 6053 5 649 1265 270 120 0 chr13 8438606 8439066 -111845246 - L1MA7 LINE L1 -291 6000 5486 5 649 446 272 39 23 chr13 8439071 8439199 -111845113 - B1F SINE Alu -1 148 19 5 649 5914 49 12 0 chr13 8439222 8439961 -111844351 - RLTR13C2 LTR ERVK 0 808 61 6 649 341 277 80 0 chr13 8439961 8440073 -111844239 - L1M2 LINE L1 -733 6140 6020 6 649 716 303 62 8 chr13 8440091 8440368 -111843944 - L1M2 LINE L1 -4273 2576 2290 6 649 358 225 0 0 chr13 8440383 8440454 -111843858 - ID4_ SINE ID -11 72 2 6 649 2368 75 3 10 chr13 8440481 8440789 -111843523 - L1Md_F2 LINE L1 -5 6577 6272 6 649 4503 42 76 2 chr13 8440793 8441318 -111842994 - LTRIS2 LTR ERV1 0 564 1 6 649 356 238 0 0 chr13 8441349 8441436 -111842876 - L1M2 LINE L1 -4586 2263 2182 6 649 261 0 0 0 chr13 8441548 8441577 -111842735 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 649 353 233 138 0 chr13 8441649 8441765 -111842547 - L1M2 LINE L1 -4847 1922 1791 6 649 6288 96 46 6 chr13 8442213 8443126 -111841186 - Lx LINE L1 -7 6647 5698 6 649 828 313 38 28 chr13 8443263 8443552 -111840760 + B4A SINE B4 1 292 0 6 649 386 298 192 0 chr13 8444640 8444801 -111839511 - MLT1A0 LTR MaLR 0 365 174 6 649 247 262 69 35 chr13 8444834 8444921 -111839391 - MLT1A0 LTR MaLR -316 92 3 6 649 777 220 27 181 chr13 8444951 8445433 -111838879 - RMER17C LTR ERVK -2 408 1 6 649 286 250 0 15 chr13 8445494 8445559 -111838753 - MIRb SINE MIR -83 185 122 6 649 407 333 38 6 chr13 8446919 8447076 -111837236 - MLT1A LTR MaLR -38 336 175 6 649 23 0 0 0 chr13 8447211 8447234 -111837078 + AT_rich Low_complexity Low_complexity 1 23 0 6 649 217 189 0 0 chr13 8447688 8447725 -111836587 + MIRc SINE MIR 93 129 -139 6 649 256 262 12 24 chr13 8447965 8448047 -111836265 - Charlie18a DNA MER1_type -7 335 255 6 649 261 0 0 0 chr13 8448060 8448089 -111836223 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 6 649 21 36 0 0 chr13 8449902 8449930 -111834382 + AT_rich Low_complexity Low_complexity 1 28 0 6 649 1089 86 11 4 chr13 8450218 8450783 -111833529 + (TG)n Simple_repeat Simple_repeat 1 569 0 6 649 25 0 0 0 chr13 8451270 8451295 -111833017 + AT_rich Low_complexity Low_complexity 1 25 0 6 649 777 370 16 19 chr13 8451295 8451659 -111832653 + L4 LINE RTE 1226 1588 -441 6 649 190 242 188 31 chr13 8451717 8451781 -111832531 - MER5B DNA MER1_type -62 116 43 6 649 3364 49 10 8 chr13 8452128 8452521 -111831791 + MTA_Mm LTR MaLR 1 394 -2 6 649 24 32 0 0 chr13 8452887 8452918 -111831394 + AT_rich Low_complexity Low_complexity 1 31 0 6 649 859 158 27 7 chr13 8453186 8453333 -111830979 - B1_Mur4 SINE Alu 0 150 1 6 649 282 264 21 21 chr13 8453365 8453458 -111830854 + MER104 DNA Tc2 77 169 -12 6 649 1286 7 0 0 chr13 8453477 8453621 -111830691 - L1Md_A LINE L1 0 6582 6439 6 649 392 283 5 98 chr13 8453689 8453873 -111830439 - HAL1-2a_MD LINE L1 -514 2510 2344 6 649 279 330 11 0 chr13 8453875 8453966 -111830346 + (ATG)n Simple_repeat Simple_repeat 1 92 0 6 649 601 298 16 42 chr13 8454587 8454776 -111829536 + B4A SINE B4 102 285 -7 6 649 223 186 23 0 chr13 8454779 8454822 -111829490 + (CATA)n Simple_repeat Simple_repeat 1 44 0 6 649 770 292 0 14 chr13 8454891 8455103 -111829209 - B3 SINE B2 -5 211 3 6 649 2559 73 9 0 chr13 8455328 8455657 -111828655 - L1_Mus2 LINE L1 -387 6179 5848 6 649 663 105 19 0 chr13 8455658 8455763 -111828549 + L1_Mus3 LINE L1 6525 6631 -7 6 649 340 336 62 49 chr13 8455964 8456189 -111828123 - MLT1C LTR MaLR -16 451 224 6 649 459 276 19 9 chr13 8456453 8456559 -111827753 - B1F SINE Alu -39 110 4 6 649 1666 223 74 10 chr13 8456609 8456999 -111827313 + MTD LTR MaLR 4 418 -1 6 649 233 171 0 0 chr13 8458135 8458176 -111826136 - Lx8 LINE L1 -17 7456 7416 6 649 388 135 26 26 chr13 8458192 8458268 -111826044 - HAL1-3A_ME LINE L1 -808 2050 1975 6 649 292 285 7 7 chr13 8458272 8458424 -111825888 + (TG)n Simple_repeat Simple_repeat 1 152 0 6 649 1450 279 76 18 chr13 8458674 8459292 -111825020 - L1MA5A LINE L1 -1685 5959 5325 6 649 234 105 0 0 chr13 8459294 8459332 -111824980 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 649 440 306 98 22 chr13 8459396 8459580 -111824732 - B4A SINE B4 -4 288 91 6 649 814 85 246 0 chr13 8459602 8459720 -111824592 - B1_Mus1 SINE Alu -1 147 1 6 649 324 120 0 0 chr13 8459881 8459931 -111824381 + (TCTCCC)n Simple_repeat Simple_repeat 3 52 0 6 649 2398 270 87 14 chr13 8459933 8459950 -111824362 - Lx6 LINE L1 -566 6894 6879 6 649 285 29 0 0 chr13 8459950 8459984 -111824328 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 649 2398 270 87 14 chr13 8459984 8460698 -111823614 - Lx6 LINE L1 -582 6878 6111 6 649 308 333 151 0 chr13 8461833 8461926 -111822386 + B4 SINE B4 72 178 -114 6 649 512 215 4 0 chr13 8461953 8462197 -111822115 + (CA)n Simple_repeat Simple_repeat 1 245 0 6 649 376 122 24 0 chr13 8463299 8463381 -111820931 + (TCTCC)n Simple_repeat Simple_repeat 5 88 0 6 649 976 22 7 28 chr13 8463602 8463745 -111820567 + (GAAAA)n Simple_repeat Simple_repeat 2 141 0 6 649 229 333 42 0 chr13 8464507 8464579 -111819733 + B4A SINE B4 118 192 -100 6 649 21 0 0 0 chr13 8465380 8465401 -111818911 + AT_rich Low_complexity Low_complexity 1 21 0 6 649 209 279 26 35 chr13 8465894 8466009 -111818303 + (CATATA)n Simple_repeat Simple_repeat 3 116 0 6 649 208 204 37 55 chr13 8466310 8466419 -111817893 + (TTATA)n Simple_repeat Simple_repeat 3 109 0 6 649 326 115 0 16 chr13 8466837 8466899 -111817413 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 649 212 86 29 0 chr13 8468288 8468323 -111815989 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 649 438 259 8 191 chr13 8468364 8468626 -111815686 - Lx8 LINE L1 -17 7456 7243 6 649 443 305 107 5 chr13 8468655 8468879 -111815433 - L1MB4 LINE L1 -292 5888 5642 6 649 2173 117 12 15 chr13 8468879 8469217 -111815095 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 649 29423 21 1 0 chr13 8469221 8472487 -111811825 - IAPEz-int LTR ERVK -3 6478 3210 6 649 8992 75 44 10 chr13 8472486 8473749 -111810563 - IAPEz-int LTR ERVK -5168 1313 8 6 649 2173 117 12 15 chr13 8473749 8474087 -111810225 - IAPLTR1a_Mm LTR ERVK 0 337 1 6 649 514 278 127 33 chr13 8474321 8474731 -111809581 - L1MB4 LINE L1 -813 5333 4885 6 649 1401 233 48 33 chr13 8474733 8474748 -111809564 - MTE2b LTR MaLR -37 342 328 6 649 582 54 0 0 chr13 8474748 8474822 -111809490 + (GGAA)n Simple_repeat Simple_repeat 1 74 0 6 649 1401 233 48 33 chr13 8474822 8475143 -111809169 - MTE2b LTR MaLR -52 327 3 6 649 187 262 61 15 chr13 8476873 8476939 -111807373 - MIRc SINE MIR -86 182 114 6 649 919 243 44 36 chr13 8477347 8477595 -111806717 - MTEb LTR MaLR -8 371 122 6 649 369 0 0 0 chr13 8478826 8478867 -111805445 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 649 263 293 60 24 chr13 8479875 8479959 -111804353 + L2c LINE L2 3292 3378 -9 6 649 818 249 92 25 chr13 8480332 8480571 -111803741 + RMER1C Other Other 1087 1341 -1 6 649 377 337 93 13 chr13 8481051 8481352 -111802960 + Charlie20a DNA Charlie 324 648 -159 6 649 22 0 0 0 chr13 8482206 8482228 -111802084 + AT_rich Low_complexity Low_complexity 1 22 0 6 649 203 283 0 0 chr13 8482534 8482580 -111801732 + MIR SINE MIR 93 138 -70 6 649 315 0 0 0 chr13 8482789 8482824 -111801488 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 649 823 257 18 57 chr13 8482843 8483070 -111801242 - B4 SINE B4 -72 220 3 6 649 411 56 0 0 chr13 8484128 8484182 -111800130 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 649 239 306 28 0 chr13 8485269 8485282 -111799030 + ID SINE ID 70 84 -140 6 649 349 282 24 0 chr13 8485282 8485367 -111798945 + B1F1 SINE Alu 4 90 -59 6 649 432 219 0 0 chr13 8485414 8485487 -111798825 + ID4_ SINE ID 4 76 -7 6 649 237 132 0 0 chr13 8485487 8485525 -111798787 + (CCA)n Simple_repeat Simple_repeat 1 38 0 6 649 243 354 48 36 chr13 8486019 8486186 -111798126 + ID_B1 SINE B4 54 222 -2 6 649 275 315 67 30 chr13 8486057 8486191 -111798121 + B1F2 SINE Alu 11 149 0 6 649 196 250 77 77 chr13 8487478 8487556 -111796756 + MIRc SINE MIR 113 200 -68 6 649 279 0 0 0 chr13 8487840 8487871 -111796441 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 649 1174 65 0 0 chr13 8487871 8488010 -111796302 - B1_Mus1 SINE Alu -8 140 2 6 649 423 260 0 0 chr13 8488038 8488115 -111796197 - ID4_ SINE ID -2 81 5 6 649 497 297 61 55 chr13 8488664 8489013 -111795299 - ORR1E LTR MaLR -12 358 1 6 649 236 260 0 0 chr13 8490567 8490617 -111793695 + GA-rich Low_complexity Low_complexity 4 53 0 6 649 904 280 45 38 chr13 8490626 8490893 -111793419 + B4 SINE B4 2 270 -22 6 649 447 92 0 0 chr13 8490895 8490960 -111793352 + (CA)n Simple_repeat Simple_repeat 1 65 0 6 649 875 335 34 46 chr13 8491033 8491421 -111792891 - MLT1B LTR MaLR -4 386 4 6 649 844 295 79 35 chr13 8492516 8492920 -111791392 - MER110 LTR ERV1 -6 485 64 6 649 1689 37 5 0 chr13 8493172 8493360 -111790952 - B2_Mm1t SINE B2 -3 190 2 6 649 1295 41 0 0 chr13 8494340 8494487 -111789825 - B1_Mus2 SINE Alu 0 147 1 6 649 693 24 0 0 chr13 8494672 8494755 -111789557 + (CA)n Simple_repeat Simple_repeat 2 84 0 6 649 671 262 13 7 chr13 8494756 8494906 -111789406 - B3A SINE B2 -46 152 2 6 649 630 262 105 32 chr13 8494920 8495249 -111789063 - L1M4 LINE L1 -841 5302 4927 6 649 2169 236 92 9 chr13 8495250 8495818 -111788494 - Lx8 LINE L1 -358 7115 6501 6 649 311 305 68 15 chr13 8496472 8496605 -111787707 - MLT1A1 LTR MaLR -6 402 263 6 649 2243 122 51 0 chr13 8496625 8496936 -111787376 + ORR1A2 LTR MaLR 1 327 0 6 649 1123 201 33 29 chr13 8497057 8497267 -111787045 + B3 SINE B2 5 215 -1 6 649 577 314 24 92 chr13 8497779 8497986 -111786326 - B3A SINE B2 -4 194 2 6 649 323 237 9 0 chr13 8499812 8499926 -111784386 + (TG)n Simple_repeat Simple_repeat 2 116 0 6 649 21 0 0 0 chr13 8499962 8499983 -111784329 + AT_rich Low_complexity Low_complexity 1 21 0 6 649 222 37 0 0 chr13 8500840 8500867 -111783445 + (TAA)n Simple_repeat Simple_repeat 1 27 0 1 649 737 302 32 105 chr13 8501249 8501622 -111782690 + ORR1E LTR MaLR 1 346 -13 2 649 2352 299 56 29 chr13 8502032 8503339 -111780973 - L1M2 LINE L1 -849 5294 3953 3 649 731 103 0 27 chr13 8503646 8503756 -111780556 - B1_Mur4 SINE Alu -1 149 43 4 649 258 64 0 161 chr13 8503706 8503762 -111780550 - 4.5SRNA scRNA scRNA -8 86 40 5 649 226 189 68 78 chr13 8503762 8503800 -111780512 - RLTR25B LTR ERVK -530 480 397 6 649 281 167 36 18 chr13 8503830 8503885 -111780427 - B1F2 SINE Alu -92 57 2 7 649 379 208 0 13 chr13 8506106 8506184 -111778128 + B2_Mm2 SINE B2 1 77 -118 8 649 217 0 61 0 chr13 8506187 8506220 -111778092 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 9 649 299 326 10 80 chr13 8506228 8506328 -111777984 + B3A SINE B2 90 182 -16 1 649 332 22 22 0 chr13 8509062 8509107 -111775205 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 649 337 282 58 101 chr13 8509170 8509308 -111775004 + RMER15 LTR ERVL 1 132 -443 1 649 717 307 29 40 chr13 8509368 8509646 -111774666 + RMER15 LTR ERVL 301 575 0 1 649 482 70 14 0 chr13 8509649 8509720 -111774592 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 1 649 665 238 10 152 chr13 8510930 8511232 -111773080 + Lx8 LINE L1 6810 7068 -405 1 649 423 0 0 0 chr13 8511678 8511725 -111772587 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 649 405 254 23 67 chr13 8511936 8512093 -111772219 - B4A SINE B4 -145 147 2 1 649 276 133 0 0 chr13 8512342 8512387 -111771925 + RLTR21 LTR ERVK 1 45 -1527 1 649 228 327 56 0 chr13 8512397 8512504 -111771808 + Tigger12 DNA MER2_type 1726 1838 -121 1 649 1264 257 24 37 chr13 8512616 8512999 -111771313 - MTEb LTR MaLR 0 379 2 1 649 194 339 74 40 chr13 8513021 8513196 -111771116 + MIRb SINE MIR 22 202 -66 2 649 569 286 135 69 chr13 8513371 8513822 -111770490 - L1MD LINE L1 -2626 3520 3040 2 649 363 272 0 0 chr13 8513824 8513971 -111770341 + (TTGG)n Simple_repeat Simple_repeat 1 147 0 2 649 1127 279 68 35 chr13 8514128 8514795 -111769517 - L1MD LINE L1 -3134 3012 2324 2 649 1714 295 86 30 chr13 8515271 8515451 -111768861 - L1MD1 LINE L1 -1 6358 6148 2 649 285 98 0 0 chr13 8515451 8515492 -111768820 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 649 1743 276 55 26 chr13 8515492 8516233 -111768079 - L1MD1 LINE L1 -212 6147 5386 2 649 390 21 0 0 chr13 8516273 8516320 -111767992 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 649 487 252 62 6 chr13 8516320 8516461 -111767851 - B3A SINE B2 -44 154 5 2 649 266 250 129 0 chr13 8516550 8516666 -111767646 - L1MD1 LINE L1 -912 5234 5104 2 649 291 54 0 0 chr13 8518272 8518309 -111766003 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 649 202 292 0 0 chr13 8518317 8518365 -111765947 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 650 381 70 0 0 chr13 8519798 8519855 -111764457 + (A)n Simple_repeat Simple_repeat 1 57 0 2 650 1518 122 115 59 chr13 8520514 8520818 -111763494 - ORR1A4 LTR MaLR -8 321 1 3 650 1465 274 55 0 chr13 8520818 8521145 -111763167 - MTE2b LTR MaLR -34 345 1 3 650 1073 272 124 16 chr13 8521253 8521616 -111762696 + MTD LTR MaLR 18 419 0 3 650 189 0 0 0 chr13 8522027 8522048 -111762264 + (A)n Simple_repeat Simple_repeat 1 21 0 3 650 1976 134 97 29 chr13 8522551 8522934 -111761378 - RLTR9E LTR ERVK 0 409 1 3 650 216 0 0 0 chr13 8522985 8523009 -111761303 + (TTGG)n Simple_repeat Simple_repeat 2 25 0 3 650 201 330 92 28 chr13 8523382 8523491 -111760821 + L2a LINE L2 3296 3411 -15 3 650 444 19 0 0 chr13 8523652 8523705 -111760607 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 650 204 250 35 35 chr13 8523927 8523985 -111760327 + (CATG)n Simple_repeat Simple_repeat 1 58 0 3 650 1042 308 89 25 chr13 8523988 8524541 -111759771 - Lx8 LINE L1 -148 7325 6738 3 650 610 168 0 16 chr13 8525903 8526085 -111758227 + CT-rich Low_complexity Low_complexity 2 180 0 4 650 710 150 0 11 chr13 8526104 8526286 -111758026 + CT-rich Low_complexity Low_complexity 1 180 0 4 650 762 251 46 57 chr13 8526290 8526484 -111757828 - ID_B1 SINE B4 -20 204 13 4 650 330 350 45 30 chr13 8526755 8526955 -111757357 - MER20 DNA MER1_type 0 219 17 4 650 198 71 0 0 chr13 8526987 8527015 -111757297 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 650 6135 112 19 4 chr13 8527020 8527920 -111756392 - Lx LINE L1 -4 6650 5738 4 650 1551 267 10 2 chr13 8527922 8528324 -111755988 - Lx8 LINE L1 -185 7288 6884 4 650 793 286 87 90 chr13 8528348 8528694 -111755618 - ORR1E LTR MaLR 0 359 15 4 650 1797 205 55 25 chr13 8528981 8529381 -111754931 - RLTR20A LTR ERVK -129 412 1 4 650 183 298 0 0 chr13 8529564 8529611 -111754701 - MIRc SINE MIR -57 211 165 4 650 623 291 30 0 chr13 8529944 8530078 -111754234 - B1F1 SINE Alu -6 143 6 4 650 380 307 53 87 chr13 8530078 8530091 -111754221 - B4 SINE B4 -69 220 79 5 650 591 182 0 41 chr13 8530527 8530699 -111753613 + GA-rich Low_complexity Low_complexity 2 166 0 5 650 1207 50 0 0 chr13 8532589 8532748 -111751564 - L1Md_F2 LINE L1 -33 6549 6391 5 650 543 182 29 36 chr13 8532749 8532886 -111751426 + Lx7 LINE L1 7561 7696 0 5 650 432 268 34 44 chr13 8534934 8535199 -111749113 + MTEa LTR MaLR 12 375 -4 5 650 256 405 6 11 chr13 8535363 8535538 -111748774 + MIR SINE MIR 79 252 -10 5 650 779 212 40 17 chr13 8536674 8536847 -111747465 - B3A SINE B2 -17 181 5 5 650 702 276 55 76 chr13 8537065 8537355 -111746957 - B4 SINE B4 -5 287 4 5 650 374 320 10 0 chr13 8538614 8538717 -111745595 + MER45A DNA Tip100 63 166 -12 5 650 305 62 0 20 chr13 8539198 8539247 -111745065 + (TTTTTG)n Simple_repeat Simple_repeat 6 53 0 5 650 1179 48 7 7 chr13 8539247 8539394 -111744918 - B1_Mus1 SINE Alu 0 148 2 6 650 282 275 0 42 chr13 8539995 8540067 -111744245 + RSINE1 SINE B4 68 136 -29 6 650 264 130 0 0 chr13 8541708 8541754 -111742558 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 650 952 281 27 44 chr13 8541757 8542051 -111742261 - B4 SINE B4 -1 291 3 6 650 660 255 114 0 chr13 8543312 8543496 -111740816 - B3 SINE B2 -11 205 1 6 650 180 0 0 0 chr13 8544356 8544376 -111739936 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 650 220 322 59 8 chr13 8544409 8544528 -111739784 - L2a LINE L2 -86 3340 3216 6 650 212 297 67 38 chr13 8545331 8545436 -111738876 - MIR SINE MIR -9 253 146 6 650 240 250 0 0 chr13 8545440 8545520 -111738792 + (ATG)n Simple_repeat Simple_repeat 2 81 0 6 650 181 349 112 34 chr13 8545525 8545614 -111738698 - MIRb SINE MIR -138 130 35 6 650 258 342 34 0 chr13 8546812 8546929 -111737383 - MER94 DNA AcHobo 0 134 14 7 650 655 299 89 47 chr13 8547258 8547414 -111736898 + B4 SINE B4 1 156 -136 7 650 216 97 0 0 chr13 8547414 8547445 -111736867 + (CAGC)n Simple_repeat Simple_repeat 3 33 0 7 650 655 300 89 47 chr13 8547445 8547504 -111736808 + B4 SINE B4 157 222 -70 7 650 937 105 20 0 chr13 8547504 8547656 -111736656 + (GGAA)n Simple_repeat Simple_repeat 3 157 0 7 650 457 325 88 62 chr13 8547656 8547679 -111736633 + B4A SINE B4 223 245 -47 7 650 534 54 0 0 chr13 8547679 8547753 -111736559 + (GAAA)n Simple_repeat Simple_repeat 1 74 0 7 650 189 0 0 0 chr13 8547793 8547814 -111736498 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 650 282 306 250 0 chr13 8548581 8548689 -111735623 - RSINE1 SINE B4 -28 137 3 7 650 877 288 0 14 chr13 8549437 8549655 -111734657 + ID_B1 SINE B4 1 215 -9 7 650 327 246 118 7 chr13 8549896 8550031 -111734281 - Lx8 LINE L1 -365 7108 6959 7 650 829 146 12 0 chr13 8550168 8550333 -111733979 + CT-rich Low_complexity Low_complexity 1 167 0 7 650 409 243 101 50 chr13 8550552 8550603 -111733709 + CYRA11_Mm Unknown Y-chromosome 112 172 -445 8 650 960 127 13 6 chr13 8550603 8550762 -111733550 - URR1A DNA MER1_type 0 226 67 8 650 716 246 42 16 chr13 8550940 8551130 -111733182 - MLT1B LTR MaLR 0 390 196 8 650 450 0 0 0 chr13 8551929 8551979 -111732333 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 650 226 238 44 73 chr13 8552184 8552237 -111732075 + ID2 SINE ID 8 60 -23 8 650 480 18 0 0 chr13 8552237 8552294 -111732018 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 650 226 238 44 73 chr13 8552294 8552308 -111732004 + ID2 SINE ID 61 73 -10 8 650 518 314 54 92 chr13 8553213 8553309 -111731003 - L1ME2 LINE L1 -197 5967 5879 8 650 555 29 0 0 chr13 8553309 8553378 -111730934 + (TC)n Simple_repeat Simple_repeat 1 69 0 8 650 518 314 54 92 chr13 8553378 8554021 -111730291 - L1ME2 LINE L1 -286 5878 5256 8 650 584 362 92 31 chr13 8554153 8554629 -111729683 - L1ME2 LINE L1 -3361 2785 2281 8 650 321 260 21 22 chr13 8554829 8554947 -111729365 - B1F SINE Alu 0 149 26 8 650 870 264 35 0 chr13 8555668 8555869 -111728443 + B3 SINE B2 9 216 0 8 650 459 242 56 11 chr13 8555947 8556067 -111728245 - L1MA9 LINE L1 -7 6293 6165 9 650 225 65 0 0 chr13 8556067 8556098 -111728214 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 650 459 279 164 28 chr13 8556098 8556441 -111727871 - L1MA9 LINE L1 -148 6164 5731 9 650 308 322 75 38 chr13 8556503 8556742 -111727570 - L1MA9 LINE L1 -608 5572 5325 9 650 23 0 0 0 chr13 8557003 8557026 -111727286 + AT_rich Low_complexity Low_complexity 1 23 0 9 650 534 31 0 0 chr13 8557769 8557833 -111726479 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 650 221 383 0 0 chr13 8558591 8558685 -111725627 + C-rich Low_complexity Low_complexity 6 99 0 9 650 732 63 9 18 chr13 8559600 8559713 -111724599 + (GGAGA)n Simple_repeat Simple_repeat 5 116 0 9 650 1020 257 110 20 chr13 8560059 8560207 -111724105 - MTEa LTR MaLR -3 376 216 9 650 228 35 0 0 chr13 8560207 8560236 -111724076 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 9 650 1020 257 110 20 chr13 8560236 8560432 -111723880 - MTEa LTR MaLR -164 215 1 9 650 219 245 0 0 chr13 8561855 8561908 -111722404 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 650 466 264 42 94 chr13 8561928 8562002 -111722310 - B4A SINE B4 0 292 221 9 650 201 39 0 0 chr13 8562002 8562028 -111722284 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1 650 466 264 42 94 chr13 8562028 8562145 -111722167 - B4A SINE B4 -72 220 111 9 650 22 0 0 0 chr13 8563335 8563357 -111720955 + AT_rich Low_complexity Low_complexity 1 22 0 1 650 700 40 30 0 chr13 8564789 8564888 -111719424 + (TAGA)n Simple_repeat Simple_repeat 2 103 0 1 650 556 269 101 10 chr13 8565275 8565474 -111718838 + B4A SINE B4 1 217 -75 1 650 495 0 0 0 chr13 8565554 8565609 -111718703 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 650 504 239 0 0 chr13 8567615 8567757 -111716555 + (TA)n Simple_repeat Simple_repeat 2 143 0 1 650 652 197 21 57 chr13 8567821 8567961 -111716351 + RSINE1 SINE B4 3 137 -28 1 650 240 35 0 0 chr13 8567989 8568018 -111716294 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 650 871 289 5 0 chr13 8570463 8570660 -111713652 + ID_B1 SINE B4 5 202 -22 1 650 347 59 39 0 chr13 8570660 8570711 -111713601 + (GGGA)n Simple_repeat Simple_repeat 3 55 0 1 650 921 160 12 8 chr13 8570713 8570971 -111713341 + GA-rich Low_complexity Low_complexity 1 259 0 1 650 302 262 25 0 chr13 8571023 8571103 -111713209 - ID4 SINE ID 0 83 2 1 650 225 0 0 0 chr13 8571889 8571914 -111712398 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 1 650 610 253 25 45 chr13 8572107 8572306 -111712006 - B3A SINE B2 0 198 4 1 650 774 282 74 0 chr13 8572307 8572523 -111711789 - B4A SINE B4 -60 232 1 1 650 275 49 24 0 chr13 8573120 8573161 -111711151 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 650 686 269 63 63 chr13 8574729 8575015 -111709297 + B4 SINE B4 5 290 -2 1 650 1143 63 94 6 chr13 8576680 8576840 -111707472 + L1Md_F2 LINE L1 6394 6567 -15 1 650 1154 31 25 18 chr13 8576840 8577003 -111707309 + L1Md_F3 LINE L1 6407 6570 -14 1 650 6804 109 15 24 chr13 8577009 8578950 -111705362 + L1Md_F2 LINE L1 215 2141 -3742 1 650 13499 68 2 1 chr13 8578948 8580675 -111703637 + L1Md_F2 LINE L1 3859 5586 -297 1 650 7998 58 3 4 chr13 8580676 8581671 -111702641 + L1Md_F2 LINE L1 5588 6581 -1 1 650 391 308 51 64 chr13 8581721 8581877 -111702435 + RSINE1 SINE B4 3 156 -9 1 650 612 282 0 0 chr13 8582413 8582562 -111701750 + RSINE1 SINE B4 3 151 -14 1 650 207 0 0 0 chr13 8582586 8582609 -111701703 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1 650 195 317 110 27 chr13 8585280 8585426 -111698886 + MIR SINE MIR 71 228 -34 1 650 201 278 36 18 chr13 8585589 8585644 -111698668 + MIRc SINE MIR 94 149 -119 1 650 720 309 95 57 chr13 8585652 8585968 -111698344 + Lx8 LINE L1 7092 7419 -54 1 650 468 0 0 0 chr13 8586001 8586053 -111698259 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 650 21 57 0 0 chr13 8586067 8586102 -111698210 + AT_rich Low_complexity Low_complexity 1 35 0 1 650 218 20 122 0 chr13 8586143 8586192 -111698120 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 1 650 3186 81 2 5 chr13 8588009 8588417 -111695895 - MTB_Mm LTR MaLR 0 407 1 1 650 392 284 103 0 chr13 8588585 8588701 -111695611 + B1F SINE Alu 1 128 -21 1 650 381 131 0 0 chr13 8588705 8588766 -111695546 + (TA)n Simple_repeat Simple_repeat 1 61 0 1 650 569 51 3 57 chr13 8590392 8590492 -111693820 + B1_Mm SINE Alu 53 149 0 1 650 482 295 54 0 chr13 8591274 8591403 -111692909 + RSINE1 SINE B4 6 141 -24 1 650 618 39 0 0 chr13 8591403 8591480 -111692832 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 650 303 93 0 0 chr13 8591482 8591525 -111692787 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 1 650 737 271 52 24 chr13 8591555 8591767 -111692545 + ID_B1 SINE B4 2 219 -5 1 650 1476 82 67 10 chr13 8591911 8592120 -111692192 - L1Md_F2 LINE L1 -12 6570 6350 1 650 949 52 45 2 chr13 8592120 8592253 -111692059 + Lx2 LINE L1 5823 5952 -1045 1 650 396 0 0 0 chr13 8593196 8593240 -111691072 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 650 2215 103 15 6 chr13 8593445 8593777 -111690535 + Lx2 LINE L1 6663 6997 0 1 650 342 0 0 0 chr13 8594328 8594366 -111689946 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 650 24 0 0 0 chr13 8594726 8594750 -111689562 + AT_rich Low_complexity Low_complexity 1 24 0 1 650 489 17 0 0 chr13 8594771 8594829 -111689483 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 650 242 235 87 76 chr13 8594830 8594885 -111689427 - RSINE1 SINE B4 -30 135 76 1 650 1699 103 167 7 chr13 8594885 8595167 -111689145 - ORR1A2 LTR MaLR 0 327 1 1 650 242 235 87 76 chr13 8595167 8595203 -111689109 - RSINE1 SINE B4 -90 75 43 1 650 3714 97 8 1 chr13 8595209 8595938 -111688374 - Lx3_Mus LINE L1 -869 6140 5403 1 650 2092 125 19 0 chr13 8596163 8596484 -111687828 - ORR1A2 LTR MaLR 0 327 1 1 650 25 51 0 0 chr13 8596833 8596872 -111687440 + AT_rich Low_complexity Low_complexity 1 39 0 1 650 931 99 29 0 chr13 8597512 8597684 -111686628 + (TAGA)n Simple_repeat Simple_repeat 1 177 0 1 650 214 136 62 0 chr13 8597734 8597815 -111686497 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 1 650 391 308 193 35 chr13 8597853 8598247 -111686065 - MLT2B3 LTR ERVL -86 468 13 1 650 221 333 0 84 chr13 8598318 8598413 -111685899 - PB1D10 SINE Alu -10 107 21 1 650 1714 11 0 0 chr13 8599189 8599376 -111684936 + B2_Mm1a SINE B2 2 188 -5 1 650 2050 155 51 15 chr13 8600202 8600596 -111683716 - RMER17C LTR ERVK 0 410 3 1 650 974 308 126 57 chr13 8601108 8601790 -111682522 - L1MD2 LINE L1 -71 6288 5560 1 650 246 222 83 0 chr13 8601824 8601896 -111682416 + L1MD LINE L1 4521 4598 -1548 1 650 297 0 0 0 chr13 8602415 8602448 -111681864 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 650 332 329 229 23 chr13 8602449 8602711 -111681601 + MTEa LTR MaLR 4 337 -42 1 650 230 125 158 18 chr13 8602778 8602835 -111681477 + MTEa LTR MaLR 313 377 -2 1 650 188 347 14 14 chr13 8603140 8603213 -111681099 - MIRc SINE MIR -178 90 18 1 650 373 354 42 28 chr13 8603922 8604137 -111680175 + B4A SINE B4 1 218 -74 1 650 311 317 64 16 chr13 8605284 8605409 -111678903 + B1F SINE Alu 19 149 0 1 650 235 179 151 14 chr13 8605711 8605800 -111678512 + B4 SINE B4 1 99 -193 1 650 384 155 0 0 chr13 8605870 8605941 -111678371 + (CATA)n Simple_repeat Simple_repeat 2 72 0 1 650 229 240 39 39 chr13 8606516 8606594 -111677718 - ID2 SINE ID -3 80 3 1 650 210 331 68 15 chr13 8607361 8607493 -111676819 - MIRc SINE MIR -15 253 115 1 650 2949 24 11 5 chr13 8607935 8608317 -111675995 - MTA_Mm LTR MaLR -12 384 1 1 650 859 229 134 12 chr13 8608317 8608564 -111675748 - Lx8 LINE L1 -251 7222 6946 1 650 1043 280 60 63 chr13 8608728 8609087 -111675225 - ORR1E LTR MaLR -4 366 1 1 650 241 304 0 25 chr13 8610276 8610357 -111673955 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 650 319 342 140 0 chr13 8610837 8611030 -111673282 - MIR SINE MIR -35 227 8 1 650 312 27 0 0 chr13 8611038 8611075 -111673237 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 1 650 444 316 71 90 chr13 8611140 8611408 -111672904 - B4A SINE B4 -21 271 9 1 650 282 295 29 0 chr13 8612283 8612388 -111671924 + G-rich Low_complexity Low_complexity 1 108 0 1 650 360 276 65 8 chr13 8612790 8612914 -111671398 - B1F2 SINE Alu -14 135 5 1 650 195 107 56 56 chr13 8613090 8613179 -111671133 + T-rich Low_complexity Low_complexity 1 89 0 1 650 1452 49 32 5 chr13 8613181 8613366 -111670946 - B2_Mm2 SINE B2 -4 191 2 1 650 594 252 35 14 chr13 8613366 8613507 -111670805 - ID_B1 SINE B4 -1 223 80 1 650 326 352 70 7 chr13 8613996 8614139 -111670173 + RSINE1 SINE B4 10 161 -4 1 650 620 227 22 15 chr13 8615448 8615582 -111668730 + RSINE1 SINE B4 2 136 -29 1 650 396 0 0 0 chr13 8615595 8615639 -111668673 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 650 23 33 0 0 chr13 8617869 8617899 -111666413 + AT_rich Low_complexity Low_complexity 1 30 0 1 650 194 211 0 0 chr13 8618186 8618224 -111666088 + L2a LINE L2 3362 3399 -27 1 650 633 96 0 0 chr13 8618660 8618754 -111665558 + (TGGA)n Simple_repeat Simple_repeat 1 94 0 1 650 233 346 13 0 chr13 8619766 8619844 -111664468 + ID_B1 SINE B4 93 171 -53 1 650 817 256 108 26 chr13 8620175 8620444 -111663868 + B4 SINE B4 2 292 0 1 650 252 86 0 0 chr13 8620473 8620508 -111663804 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 650 1517 263 94 13 chr13 8620509 8621053 -111663259 + L1MC1 LINE L1 5435 6022 -311 1 650 235 289 0 0 chr13 8621486 8621538 -111662774 + polypurine Low_complexity Low_complexity 4 55 0 1 650 721 244 93 0 chr13 8622075 8622247 -111662065 - B3A SINE B2 -10 188 1 1 650 423 0 0 0 chr13 8622461 8622508 -111661804 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 650 1167 257 14 14 chr13 8622516 8622590 -111661722 - B4 SINE B4 -2 290 215 1 650 402 21 0 0 chr13 8622590 8622637 -111661675 + (TTTTG)n Simple_repeat Simple_repeat 1 47 0 1 650 1167 257 14 14 chr13 8622637 8622850 -111661462 - B4 SINE B4 -78 214 4 1 650 186 325 69 46 chr13 8622971 8623058 -111661254 - L2c LINE L2 -4 3383 3295 1 650 180 0 0 0 chr13 8623383 8623403 -111660909 + (C)n Simple_repeat Simple_repeat 1 20 0 1 650 870 244 84 46 chr13 8623637 8623899 -111660413 + MTEb LTR MaLR 108 379 0 1 650 300 241 25 12 chr13 8624001 8624081 -111660231 - ID SINE ID -142 82 2 1 650 491 212 94 43 chr13 8624187 8624325 -111659987 + B3 SINE B2 1 145 -71 1 650 189 107 0 0 chr13 8624325 8624353 -111659959 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 650 6086 52 21 3 chr13 8625245 8625993 -111658319 - L1Md_F2 LINE L1 -12 6570 5809 1 650 4027 28 0 0 chr13 8626646 8627106 -111657206 + L1Md_A LINE L1 6123 6582 0 1 650 251 344 0 88 chr13 8627507 8627609 -111656703 + B1F1 SINE Alu 2 94 -55 1 650 722 261 0 0 chr13 8627702 8627844 -111656468 + B1_Mur1 SINE Alu 6 147 -2 2 650 754 238 30 118 chr13 8629963 8630004 -111654308 - MTEa LTR MaLR -139 240 212 2 650 464 205 210 6 chr13 8630004 8630166 -111654146 + B3A SINE B2 4 198 0 2 650 754 238 30 118 chr13 8630166 8630386 -111653926 - MTEa LTR MaLR -168 211 2 2 650 535 302 128 26 chr13 8630862 8631127 -111653185 - RMER15 LTR ERVL 0 575 284 2 650 246 301 30 89 chr13 8631168 8631303 -111653009 - RMER15 LTR ERVL -445 130 4 2 650 3051 147 8 19 chr13 8632270 8632798 -111651514 - RLTR28 LTR ERVL -2 522 1 2 650 33028 82 12 1 chr13 8634022 8639215 -111645097 + L1Md_F2 LINE L1 331 5584 -299 2 650 7985 54 6 10 chr13 8639216 8640215 -111644097 + L1Md_F2 LINE L1 5588 6582 0 2 650 294 322 27 27 chr13 8641726 8641873 -111642439 - RMER30 DNA MER1_type -1 201 55 2 650 316 324 0 0 chr13 8641732 8641834 -111642478 + Charlie12 DNA MER1_type 7 108 -2765 2 650 446 245 199 33 chr13 8641904 8642145 -111642167 - B4A SINE B4 -10 282 2 2 650 230 0 33 0 chr13 8642366 8642396 -111641916 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 650 1379 259 12 72 chr13 8642805 8643208 -111641104 - MTEa LTR MaLR 0 379 1 2 650 435 288 92 23 chr13 8643289 8643463 -111640849 + ORR1E LTR MaLR 8 193 -166 2 650 586 78 20 0 chr13 8643939 8644041 -111640271 + (TC)n Simple_repeat Simple_repeat 2 105 0 2 650 213 356 50 38 chr13 8644041 8644251 -111640061 + MIRc SINE MIR 42 260 -8 2 650 21 0 0 0 chr13 8644904 8644925 -111639387 + AT_rich Low_complexity Low_complexity 1 21 0 2 650 1791 65 30 8 chr13 8645233 8645467 -111638845 - L1_Mus3 LINE L1 -471 6167 5929 2 650 3283 88 9 2 chr13 8645467 8645920 -111638392 + L1_Mus3 LINE L1 6180 6635 -3 2 650 646 266 68 51 chr13 8646154 8646388 -111637924 - B4 SINE B4 -6 286 49 2 650 315 376 61 5 chr13 8646716 8646914 -111637398 - MLT1G1 LTR MaLR -16 563 355 2 650 219 36 0 0 chr13 8647688 8647716 -111636596 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 650 895 301 15 11 chr13 8649148 8649413 -111634899 - B4 SINE B4 -12 280 15 2 650 849 242 45 58 chr13 8650389 8650747 -111633565 + ORR1E LTR MaLR 8 379 0 2 651 644 282 95 4 chr13 8651093 8651356 -111632956 + B4A SINE B4 3 289 -3 2 651 201 39 0 0 chr13 8651848 8651874 -111632438 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2 651 296 261 102 0 chr13 8651979 8652067 -111632245 + B4 SINE B4 8 104 -188 2 651 564 294 98 49 chr13 8652145 8652452 -111631860 + Lx8 LINE L1 6851 7172 -301 2 651 304 275 0 48 chr13 8652714 8652798 -111631514 + B4 SINE B4 213 292 0 2 651 264 239 216 0 chr13 8652893 8652981 -111631331 + PB1D10 SINE Alu 10 116 -1 2 651 263 93 0 23 chr13 8653005 8653049 -111631263 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 651 314 88 29 29 chr13 8653068 8653138 -111631174 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 2 651 316 262 168 0 chr13 8653188 8653295 -111631017 + PB1 SINE Alu 1 125 -2 2 651 32146 112 16 21 chr13 8653561 8659936 -111624376 + L1_Mus1 LINE L1 220 6566 -1 2 651 1023 156 0 0 chr13 8660069 8660248 -111624064 + CT-rich Low_complexity Low_complexity 2 180 0 2 651 262 303 13 0 chr13 8661964 8662040 -111622272 + MLT1A LTR MaLR 1 77 -297 2 651 830 255 29 24 chr13 8662127 8662336 -111621976 + ID_B1 SINE B4 9 218 -6 2 651 533 15 15 0 chr13 8662359 8662425 -111621887 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 651 843 256 146 3 chr13 8662482 8662791 -111621521 + MLT1B-int LTR MaLR 1370 1722 -13 2 651 353 325 61 45 chr13 8662800 8663119 -111621193 + MLT1B LTR MaLR 1 322 -68 2 651 526 271 8 0 chr13 8663659 8663777 -111620535 - RSINE1 SINE B4 -45 120 2 2 651 3424 18 3 5 chr13 8664955 8665346 -111618966 + RLTR10 LTR ERVK 1 390 0 2 651 17537 20 10 0 chr13 8665348 8667311 -111617001 + RLTR10-int LTR ERVK 3 1984 -3 2 651 3436 15 3 5 chr13 8667313 8667704 -111616608 + RLTR10 LTR ERVK 1 390 0 2 651 2081 83 0 3 chr13 8667938 8668229 -111616083 - L1_Mus4 LINE L1 -2 6634 6345 2 651 544 297 78 11 chr13 8668382 8668633 -111615679 + ORR1E LTR MaLR 3 309 -50 2 651 481 301 166 0 chr13 8668801 8668964 -111615348 - ORR1E LTR MaLR -43 316 127 2 651 908 63 0 0 chr13 8669526 8669652 -111614660 + B1_Mus2 SINE Alu 17 142 -5 2 651 254 182 0 0 chr13 8669657 8669712 -111614600 + A-rich Low_complexity Low_complexity 1 55 0 2 651 297 286 41 56 chr13 8670101 8670334 -111613978 - MIRb SINE MIR 0 262 31 2 651 349 293 50 0 chr13 8670571 8670711 -111613601 + (TATATG)n Simple_repeat Simple_repeat 6 152 0 2 651 959 127 12 12 chr13 8670891 8671059 -111613253 + URR1A DNA MER1_type 58 225 -1 2 651 24 0 0 0 chr13 8671062 8671086 -111613226 + AT_rich Low_complexity Low_complexity 1 24 0 2 651 245 51 26 0 chr13 8671103 8671142 -111613170 + (TCCCC)n Simple_repeat Simple_repeat 5 44 0 2 651 287 289 26 90 chr13 8673590 8673746 -111610566 + MIR SINE MIR 56 201 -61 2 651 240 226 0 0 chr13 8673954 8674016 -111610296 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 651 1009 261 35 82 chr13 8674042 8674409 -111609903 + MTE2a LTR MaLR 29 378 -1 2 651 187 333 51 0 chr13 8674485 8674563 -111609749 - L2a LINE L2 -39 3387 3306 2 651 302 0 26 0 chr13 8674738 8674776 -111609536 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 2 651 1158 238 161 30 chr13 8675578 8675951 -111608361 - Lx8 LINE L1 -2 7471 7050 2 651 24 0 0 0 chr13 8676174 8676198 -111608114 + AT_rich Low_complexity Low_complexity 1 24 0 2 651 24 0 0 0 chr13 8676519 8676543 -111607769 + AT_rich Low_complexity Low_complexity 1 24 0 2 651 23 33 0 0 chr13 8676881 8676911 -111607401 + AT_rich Low_complexity Low_complexity 1 30 0 2 651 505 310 14 7 chr13 8676946 8677092 -111607220 + B1F SINE Alu 1 147 -2 2 651 25 31 0 0 chr13 8677197 8677229 -111607083 + AT_rich Low_complexity Low_complexity 1 32 0 2 651 1346 227 7 25 chr13 8678303 8678588 -111605724 + B4 SINE B4 5 284 -8 2 651 447 52 0 0 chr13 8678986 8679044 -111605268 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 651 975 119 0 4 chr13 8680535 8680807 -111603505 + (TC)n Simple_repeat Simple_repeat 1 270 0 2 651 456 67 0 0 chr13 8680808 8680868 -111603444 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 651 1340 56 0 11 chr13 8681790 8681970 -111602342 - L1_Mus1 LINE L1 -1 6566 6389 2 651 1056 42 0 0 chr13 8681970 8682090 -111602222 + L1_Mus1 LINE L1 6320 6439 -128 2 651 748 231 40 11 chr13 8682100 8682275 -111602037 + MTD LTR MaLR 8 187 -232 2 651 2466 63 6 24 chr13 8682275 8682616 -111601696 + L1_Mus3 LINE L1 6304 6638 0 2 651 243 280 43 78 chr13 8682616 8682647 -111601665 + MTD LTR MaLR 159 183 -196 2 651 720 111 0 0 chr13 8682647 8682755 -111601557 + (GAAA)n Simple_repeat Simple_repeat 2 109 0 2 651 578 216 191 11 chr13 8682756 8682934 -111601378 + MTD LTR MaLR 196 405 -14 2 651 858 134 22 0 chr13 8683526 8683660 -111600652 + B1_Mur4 SINE Alu 1 137 -13 2 651 471 18 0 0 chr13 8683660 8683716 -111600596 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 651 767 255 62 0 chr13 8683900 8684108 -111600204 - ID_B1 SINE B4 -2 222 2 2 651 335 311 0 10 chr13 8685700 8685804 -111598508 - MLT1A0 LTR MaLR -7 358 256 2 651 272 238 0 0 chr13 8685805 8685868 -111598444 - L1MC LINE L1 -597 5747 5685 2 651 21 0 0 0 chr13 8686247 8686268 -111598044 + AT_rich Low_complexity Low_complexity 1 21 0 2 651 587 278 0 7 chr13 8686465 8686610 -111597702 - RSINE1 SINE B4 -21 144 1 2 651 21 36 0 0 chr13 8687247 8687275 -111597037 + AT_rich Low_complexity Low_complexity 1 28 0 2 651 1718 130 40 43 chr13 8687398 8687720 -111596592 - ORR1A4 LTR MaLR -8 321 1 2 651 5708 123 18 131 chr13 8687720 8688492 -111595820 - ORR1A4-int LTR MaLR 0 1963 1336 2 651 1164 101 0 0 chr13 8688492 8688661 -111595651 + (TTC)n Simple_repeat Simple_repeat 2 170 0 2 651 261 0 0 0 chr13 8688669 8688698 -111595614 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 651 960 101 25 6 chr13 8688698 8688848 -111595464 - L1_Mus4 LINE L1 -9 6627 6475 2 651 5708 123 18 131 chr13 8688848 8689369 -111594943 - ORR1A4-int LTR MaLR -628 1335 817 2 651 216 0 0 0 chr13 8690420 8690444 -111593868 + (GA)n Simple_repeat Simple_repeat 2 25 0 2 651 378 0 0 0 chr13 8690584 8690626 -111593686 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 651 441 0 0 0 chr13 8690626 8690674 -111593638 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 651 653 136 26 0 chr13 8692773 8692927 -111591385 + (TG)n Simple_repeat Simple_repeat 1 158 0 2 651 284 293 191 36 chr13 8692928 8693179 -111591133 - B4 SINE B4 -2 290 1 2 651 445 158 21 35 chr13 8693738 8693882 -111590430 + (TA)n Simple_repeat Simple_repeat 2 143 0 2 651 829 247 201 0 chr13 8694075 8694314 -111589998 + Lx8 LINE L1 7008 7294 -179 2 651 394 221 0 23 chr13 8695307 8695395 -111588917 - MTEa LTR MaLR 0 379 294 2 651 307 306 35 0 chr13 8695503 8695588 -111588724 - ORR1E LTR MaLR -268 91 4 2 651 459 0 0 0 chr13 8695701 8695752 -111588560 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 651 525 301 118 63 chr13 8696084 8696231 -111588081 - MTEa LTR MaLR -13 366 193 2 651 2249 113 25 0 chr13 8696231 8696549 -111587763 - ORR1A3 LTR MaLR 0 326 1 2 651 525 301 118 63 chr13 8696549 8696748 -111587564 - MTEa LTR MaLR -187 192 2 2 651 222 37 0 0 chr13 8697321 8697348 -111586964 + (CCA)n Simple_repeat Simple_repeat 3 29 0 2 651 206 32 32 0 chr13 8697620 8697651 -111586661 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 651 180 0 0 0 chr13 8697690 8697710 -111586602 + (A)n Simple_repeat Simple_repeat 1 20 0 2 651 215 294 0 29 chr13 8697718 8697788 -111586524 + GA-rich Low_complexity Low_complexity 4 71 0 2 651 980 280 0 48 chr13 8698491 8698761 -111585551 - B4 SINE B4 0 292 36 2 651 910 233 39 104 chr13 8700254 8700561 -111583751 + B4 SINE B4 4 290 -2 2 651 233 333 0 16 chr13 8701717 8701778 -111582534 - RSINE1 SINE B4 0 165 106 2 651 217 250 0 18 chr13 8701795 8701852 -111582460 + (TATG)n Simple_repeat Simple_repeat 3 58 0 2 651 192 200 0 0 chr13 8701924 8701964 -111582348 + (TATATG)n Simple_repeat Simple_repeat 5 44 0 2 651 241 343 100 79 chr13 8701985 8702175 -111582137 - B4 SINE B4 -24 268 75 2 651 416 255 224 5 chr13 8702700 8702932 -111581380 - ORR1E LTR MaLR 0 370 80 3 651 827 171 265 0 chr13 8702973 8703143 -111581169 + B3 SINE B2 2 216 0 3 651 299 296 49 0 chr13 8703200 8703281 -111581031 - Ricksha_c DNA MuDR -1597 451 367 3 651 3950 117 7 15 chr13 8703366 8703959 -111580353 + Lx2B LINE L1 6410 6997 -3 3 651 300 250 45 12 chr13 8704089 8704194 -111580118 + B4 SINE B4 2 120 -104 3 651 456 67 0 0 chr13 8704206 8704266 -111580046 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 651 317 99 47 47 chr13 8704313 8704398 -111579914 + (CAGAGA)n Simple_repeat Simple_repeat 2 86 0 3 651 636 107 9 18 chr13 8704416 8704530 -111579782 + (GGAA)n Simple_repeat Simple_repeat 3 115 0 3 651 201 105 26 26 chr13 8706194 8706233 -111578079 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 3 651 731 288 14 9 chr13 8706266 8706476 -111577836 - ID_B1 SINE B4 -10 214 4 3 651 645 96 0 0 chr13 8706656 8706750 -111577562 + (TGGA)n Simple_repeat Simple_repeat 3 96 0 3 651 405 54 0 0 chr13 8706818 8706874 -111577438 + (CATA)n Simple_repeat Simple_repeat 1 56 0 3 651 2477 256 73 26 chr13 8706919 8707660 -111576652 - Lx9 LINE L1 -172 7472 6697 3 651 469 314 29 0 chr13 8707673 8707813 -111576499 - Lx9 LINE L1 -1038 6606 6463 3 651 764 296 21 45 chr13 8708662 8708995 -111575317 - L1M2 LINE L1 -880 5263 4939 3 651 626 37 12 0 chr13 8710927 8711008 -111573304 + (TAGA)n Simple_repeat Simple_repeat 1 82 0 3 651 321 215 211 48 chr13 8711329 8711495 -111572817 - MTE2a LTR MaLR 0 379 187 3 651 291 296 17 8 chr13 8711530 8711665 -111572647 - Lx8 LINE L1 -434 5866 5704 3 651 237 399 15 0 chr13 8711676 8711851 -111572461 - MIR SINE MIR -56 206 34 3 651 279 305 167 22 chr13 8711927 8712155 -111572157 - L1M5 LINE L1 -2343 3803 3543 3 651 775 236 65 19 chr13 8712197 8712413 -111571899 - MER2 DNA MER2_type -7 338 113 3 651 1036 303 4 22 chr13 8713209 8713486 -111570826 - B4A SINE B4 -18 274 3 3 651 252 86 0 0 chr13 8714945 8714980 -111569332 + (TGG)n Simple_repeat Simple_repeat 3 37 0 3 651 543 281 7 21 chr13 8715029 8715171 -111569141 - B1_Mur2 SINE Alu -1 148 9 3 651 349 287 111 0 chr13 8715184 8715292 -111569020 - B1F SINE Alu -1 148 29 3 651 633 61 0 0 chr13 8715319 8715401 -111568911 + (TTTTA)n Simple_repeat Simple_repeat 4 85 0 3 651 2115 256 57 26 chr13 8715420 8716517 -111567795 - Lx5 LINE L1 -96 7364 5977 3 651 395 293 6 18 chr13 8716793 8716963 -111567349 + CT-rich Low_complexity Low_complexity 1 168 0 3 651 309 174 0 0 chr13 8716963 8717032 -111567280 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 651 332 145 24 0 chr13 8717019 8717102 -111567210 + (TCTCTG)n Simple_repeat Simple_repeat 2 86 0 3 651 183 242 0 0 chr13 8717174 8717236 -111567076 + CT-rich Low_complexity Low_complexity 1 62 0 3 651 345 272 100 12 chr13 8718153 8718313 -111565999 + MER63D DNA AcHobo 13 186 -875 3 651 605 47 12 0 chr13 8718725 8718810 -111565502 + (TG)n Simple_repeat Simple_repeat 2 87 0 3 651 574 280 110 18 chr13 8718854 8718879 -111565433 - B4A SINE B4 -49 243 211 3 651 180 0 0 0 chr13 8718879 8718899 -111565413 + (TTG)n Simple_repeat Simple_repeat 1 20 0 3 651 574 280 110 18 chr13 8718899 8719091 -111565221 - B4A SINE B4 -82 210 7 3 651 1164 109 0 0 chr13 8720165 8720340 -111563972 + (TG)n Simple_repeat Simple_repeat 2 176 0 3 651 847 283 42 28 chr13 8720369 8720653 -111563659 - B4A SINE B4 -4 288 1 3 651 24 0 0 0 chr13 8721725 8721749 -111562563 + AT_rich Low_complexity Low_complexity 1 24 0 3 651 331 277 11 0 chr13 8721895 8721989 -111562323 + PB1D10 SINE Alu 22 116 -1 3 651 229 312 47 0 chr13 8721991 8722055 -111562257 + ID4_ SINE ID 4 70 -13 3 651 414 0 0 0 chr13 8722056 8722102 -111562210 + (TAA)n Simple_repeat Simple_repeat 3 48 0 3 651 437 262 0 0 chr13 8722197 8722300 -111562012 + B1F1 SINE Alu 47 149 0 3 651 1359 82 33 0 chr13 8722379 8722561 -111561751 - B2_Mm1t SINE B2 -4 189 2 3 651 204 40 0 0 chr13 8723792 8723817 -111560495 + (GGA)n Simple_repeat Simple_repeat 2 26 0 3 651 3095 81 5 0 chr13 8723817 8724224 -111560088 + L1_Mus1 LINE L1 6159 6567 0 3 651 526 140 10 10 chr13 8724225 8724326 -111559986 + G-rich Low_complexity Low_complexity 5 105 0 3 651 272 309 0 100 chr13 8724584 8724674 -111559638 - ID4_ SINE ID 0 83 3 3 651 261 269 239 9 chr13 8724686 8724795 -111559517 - PB1D10 SINE Alu -7 142 9 3 651 473 275 50 45 chr13 8725841 8726020 -111558292 - MER5A DNA MER1_type -9 180 1 3 651 26 0 0 0 chr13 8726176 8726202 -111558110 + AT_rich Low_complexity Low_complexity 1 26 0 3 651 1388 235 116 13 chr13 8726274 8726299 -111558013 + MTD LTR MaLR 1 26 -393 3 651 3100 137 50 40 chr13 8726299 8726854 -111557458 + RLTR31_Mm LTR ERVK 1 561 0 3 651 1388 235 116 13 chr13 8726854 8727208 -111557104 + MTD LTR MaLR 27 419 0 3 651 323 248 114 38 chr13 8728386 8728491 -111555821 - PB1D9 SINE Alu -6 114 2 3 651 286 281 0 58 chr13 8728570 8728657 -111555655 - RSINE1 SINE B4 -74 91 10 3 651 279 79 0 0 chr13 8731362 8731400 -111552912 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 651 489 288 53 121 chr13 8731556 8731821 -111552491 + B4 SINE B4 29 275 -17 3 651 270 0 0 0 chr13 8731822 8731852 -111552460 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 651 180 0 0 0 chr13 8731853 8731873 -111552439 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 651 8676 72 10 2 chr13 8732578 8734422 -111549890 + L1_Mus1 LINE L1 4706 6566 -1 3 651 727 226 131 42 chr13 8734466 8734702 -111549610 + ORR1E LTR MaLR 98 354 -5 3 651 268 267 171 20 chr13 8734710 8734962 -111549350 + RMER12 LTR ERVK 696 985 -337 3 651 480 89 0 0 chr13 8734962 8735041 -111549271 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 651 254 330 80 0 chr13 8735490 8735578 -111548734 + PB1D7 SINE Alu 3 97 -23 3 651 379 284 0 0 chr13 8736406 8736494 -111547818 + B4 SINE B4 3 90 -202 3 651 23 0 0 0 chr13 8737041 8737064 -111547248 + AT_rich Low_complexity Low_complexity 1 23 0 3 651 1250 83 0 11 chr13 8737337 8737519 -111546793 + (GAA)n Simple_repeat Simple_repeat 1 180 0 3 651 597 243 74 63 chr13 8737639 8737828 -111546484 + B3A SINE B2 1 191 -7 3 651 658 280 103 9 chr13 8738048 8738248 -111546064 + B4A SINE B4 3 222 -70 3 651 291 226 14 35 chr13 8738248 8738338 -111545974 + RSINE1 SINE B4 2 88 -204 3 651 986 269 21 106 chr13 8739330 8739717 -111544595 + ORR1E LTR MaLR 6 359 0 3 651 532 268 11 155 chr13 8739786 8739870 -111544442 - RSINE1 SINE B4 -8 157 98 3 651 5776 55 11 0 chr13 8739870 8740581 -111543731 - L1_Mus1 LINE L1 0 6567 5849 3 651 532 268 11 155 chr13 8740581 8740677 -111543635 - RSINE1 SINE B4 -68 97 3 3 651 248 151 56 19 chr13 8741591 8741645 -111542667 + B1_Mur1 SINE Alu 88 143 -6 3 651 188 100 25 0 chr13 8741808 8741848 -111542464 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 3 651 210 143 111 125 chr13 8741977 8742049 -111542263 + B3A SINE B2 5 75 -123 3 651 1030 112 5 9 chr13 8742404 8742621 -111541691 + (TG)n Simple_repeat Simple_repeat 1 216 0 3 651 1607 127 116 7 chr13 8743495 8743780 -111540532 + ORR1B2 LTR MaLR 30 345 -22 3 651 236 268 142 30 chr13 8744152 8744321 -111539991 + MLT1D LTR MaLR 58 245 -260 3 651 287 256 222 0 chr13 8744378 8744495 -111539817 + MLT1D LTR MaLR 332 474 -31 3 651 337 191 16 0 chr13 8744688 8744751 -111539561 - MTD LTR MaLR 0 419 356 3 651 610 264 195 21 chr13 8744842 8745175 -111539137 - RMER20B LTR ERVK -235 392 2 3 651 1362 226 52 3 chr13 8745177 8745487 -111538825 - MTD LTR MaLR -59 360 36 3 651 732 247 110 30 chr13 8745896 8746096 -111538216 - ID_B1 SINE B4 -7 217 2 3 651 804 293 59 22 chr13 8746413 8746685 -111537627 + B4A SINE B4 11 292 0 3 651 1211 61 0 0 chr13 8747805 8747952 -111536360 + B1_Mus2 SINE Alu 1 147 0 3 651 335 225 49 12 chr13 8749482 8749563 -111534749 + RMER30 DNA MER1_type 8 91 -111 3 651 1290 253 42 28 chr13 8749613 8749967 -111534345 + ORR1E LTR MaLR 1 359 0 3 651 343 238 50 0 chr13 8749968 8750048 -111534264 + RMER30 DNA MER1_type 117 200 -2 3 651 265 317 24 0 chr13 8750952 8751034 -111533278 + MER45R DNA Tip100 10 93 -1488 3 651 301 278 0 27 chr13 8751052 8751126 -111533186 - ID2 SINE ID -10 73 2 3 651 357 228 48 29 chr13 8751131 8751235 -111533077 - B1F1 SINE Alu -1 148 43 3 651 309 26 0 0 chr13 8751342 8751380 -111532932 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 3 651 490 246 48 0 chr13 8752353 8752479 -111531833 + B3 SINE B2 78 209 -7 3 651 291 284 0 26 chr13 8753109 8753185 -111531127 + RSINE1 SINE B4 72 145 -20 3 651 393 22 0 0 chr13 8753185 8753231 -111531081 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 651 194 91 0 29 chr13 8753232 8753266 -111531046 + (GGGA)n Simple_repeat Simple_repeat 1 33 0 3 651 738 298 31 27 chr13 8753556 8753780 -111530532 + B4 SINE B4 8 232 -60 3 651 426 20 0 0 chr13 8753783 8753834 -111530478 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 3 651 240 200 0 0 chr13 8754072 8754137 -111530175 + CT-rich Low_complexity Low_complexity 2 66 0 3 651 432 212 0 0 chr13 8754137 8754222 -111530090 + (TCTCTG)n Simple_repeat Simple_repeat 2 86 0 3 651 594 211 0 0 chr13 8754227 8754407 -111529905 + CT-rich Low_complexity Low_complexity 1 180 0 3 651 473 263 2 0 chr13 8754434 8754856 -111529456 + CT-rich Low_complexity Low_complexity 1 423 0 3 651 753 246 0 0 chr13 8754761 8755119 -111529193 + (CCTG)n Simple_repeat Simple_repeat 1 358 0 3 651 552 300 0 6 chr13 8755040 8755221 -111529091 + CT-rich Low_complexity Low_complexity 1 180 0 3 651 348 256 67 0 chr13 8755776 8755866 -111528446 - PB1D7 SINE Alu -7 113 18 3 651 926 269 9 0 chr13 8756138 8756354 -111527958 - B4A SINE B4 -74 218 1 4 651 449 227 171 67 chr13 8757323 8757515 -111526797 - LTR82A LTR ERVL 0 872 658 4 651 297 0 0 0 chr13 8757515 8757548 -111526764 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 651 449 227 171 67 chr13 8757548 8757624 -111526688 - LTR82A LTR ERVL -215 657 576 4 651 263 295 0 0 chr13 8757806 8757911 -111526401 - LTR82A LTR ERVL -516 356 252 4 651 697 212 169 0 chr13 8757916 8758100 -111526212 + B3 SINE B2 2 216 0 4 651 641 238 65 12 chr13 8759164 8759334 -111524978 - B3A SINE B2 -18 180 2 4 651 2050 83 31 16 chr13 8761090 8761407 -111522905 - RLTRETN_Mm LTR ERVK 0 322 1 4 651 25715 33 11 10 chr13 8761407 8766311 -111518001 - MMETn-int LTR ERVK 0 4844 1 4 651 2050 83 31 16 chr13 8766311 8766628 -111517684 - RLTRETN_Mm LTR ERVK 0 322 1 4 651 709 147 23 6 chr13 8768952 8769123 -111515189 + (TG)n Simple_repeat Simple_repeat 2 175 0 4 651 548 163 41 0 chr13 8769157 8769329 -111514983 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 651 636 155 11 23 chr13 8769387 8769661 -111514651 + (TG)n Simple_repeat Simple_repeat 1 270 0 4 651 577 294 55 36 chr13 8770243 8770462 -111513850 + ID_B1 SINE B4 2 224 0 4 651 1085 246 35 31 chr13 8770662 8770951 -111513361 - B4 SINE B4 -2 290 1 4 651 66 0 0 0 chr13 8771021 8771087 -111513225 + AT_rich Low_complexity Low_complexity 1 66 0 4 651 3024 37 29 3 chr13 8772212 8772589 -111511723 + L1Md_F2 LINE L1 6177 6563 -19 4 651 190 337 56 11 chr13 8774581 8774671 -111509641 + MIRb SINE MIR 107 200 -68 4 651 714 310 41 133 chr13 8774955 8775156 -111509156 + MTD LTR MaLR 5 208 -211 4 651 986 214 9 24 chr13 8775156 8775367 -111508945 + B3 SINE B2 1 208 -8 4 651 714 279 64 73 chr13 8775367 8775620 -111508692 + MTD LTR MaLR 209 399 -20 4 651 315 0 0 0 chr13 8776221 8776256 -111508056 + (A)n Simple_repeat Simple_repeat 1 35 0 4 651 788 236 212 4 chr13 8776256 8776520 -111507792 + RMER5 LTR ERV1 195 513 -21 4 651 376 165 355 9 chr13 8776785 8776895 -111507417 + B1_Mus1 SINE Alu 1 148 0 4 651 468 302 100 3 chr13 8777634 8777819 -111506493 + L1MA4 LINE L1 5761 5960 -196 4 651 237 291 218 0 chr13 8777992 8778102 -111506210 + MER21B LTR ERV1 415 548 -315 4 651 450 309 25 66 chr13 8778260 8778520 -111505792 + L1MC4a LINE L1 6673 6903 -1139 4 651 691 99 0 0 chr13 8778552 8778661 -111505651 - L1_Mur1 LINE L1 -2465 3678 3558 4 651 294 106 0 0 chr13 8778655 8778702 -111505610 - L1_Mm LINE L1 -2304 3579 3533 4 651 957 133 106 5 chr13 8778733 8778922 -111505390 + URR1A DNA MER1_type 5 212 -14 4 651 1731 81 5 0 chr13 8778922 8779143 -111505169 + L1_Mus1 LINE L1 5969 6190 -377 4 651 411 298 112 58 chr13 8779151 8779650 -111504662 + L1MD3 LINE L1 7453 7978 -17 4 651 387 278 17 9 chr13 8779784 8779900 -111504412 - B3A SINE B2 -15 183 67 4 651 501 254 43 14 chr13 8779879 8780019 -111504293 + B3 SINE B2 71 214 -2 4 651 186 43 0 0 chr13 8780117 8780140 -111504172 + (TATG)n Simple_repeat Simple_repeat 2 24 0 4 651 728 178 6 22 chr13 8780672 8780850 -111503462 + G-rich Low_complexity Low_complexity 5 179 0 4 651 267 216 52 0 chr13 8780869 8780985 -111503327 + GA-rich Low_complexity Low_complexity 2 123 0 4 651 223 234 40 0 chr13 8780999 8781126 -111503186 + GA-rich Low_complexity Low_complexity 1 132 0 4 651 583 271 38 31 chr13 8781288 8781448 -111502864 + RSINE1 SINE B4 4 164 -1 4 651 24 0 0 0 chr13 8781452 8781476 -111502836 + AT_rich Low_complexity Low_complexity 1 24 0 4 652 510 232 21 21 chr13 8782576 8782721 -111501591 + B4 SINE B4 87 231 -61 4 652 375 248 0 118 chr13 8782724 8782843 -111501469 + B3A SINE B2 94 198 0 4 652 689 255 246 12 chr13 8783109 8783410 -111500902 - MTEa LTR MaLR -7 372 1 4 652 234 186 0 0 chr13 8783660 8783703 -111500609 - B1_Mur2 SINE Alu -14 135 93 4 652 985 265 0 0 chr13 8784856 8785067 -111499245 - B3 SINE B2 -5 211 1 4 652 1152 64 0 0 chr13 8785340 8785480 -111498832 - B1_Mm SINE Alu -6 141 2 4 652 503 221 8 74 chr13 8785480 8785602 -111498710 + B4 SINE B4 179 292 0 4 652 862 149 8 8 chr13 8785602 8785846 -111498466 + (CATA)n Simple_repeat Simple_repeat 1 244 0 4 652 1244 275 138 31 chr13 8786953 8787247 -111497065 + MTE-int LTR MaLR 397 747 -833 4 652 754 109 114 23 chr13 8787247 8787379 -111496933 + B1_Mm SINE Alu 1 144 -3 4 652 1244 275 138 31 chr13 8787379 8787673 -111496639 + MTE-int LTR MaLR 748 1048 -532 4 652 279 176 0 0 chr13 8787785 8787836 -111496476 + MTEb LTR MaLR 327 377 -2 4 652 1915 105 3 0 chr13 8788006 8788291 -111496021 + ORR1A2 LTR MaLR 1 286 -41 4 652 6741 62 9 2 chr13 8788291 8789148 -111495164 - L1Md_F2 LINE L1 -677 5206 4344 4 652 3210 43 2 15 chr13 8789148 8789328 -111494984 + L1Md_F2 LINE L1 5194 5373 -510 4 652 3567 18 2 0 chr13 8789328 8789723 -111494589 + MTA_Mm LTR MaLR 1 396 0 4 652 3210 43 2 15 chr13 8789723 8789940 -111494372 + L1Md_F2 LINE L1 5374 5586 -297 4 652 8195 53 4 0 chr13 8789940 8790930 -111493382 + L1Md_F2 LINE L1 5587 6580 -2 4 652 312 120 0 0 chr13 8790931 8790981 -111493331 + ORR1A2 LTR MaLR 277 326 0 4 652 2160 128 42 0 chr13 8791699 8792057 -111492255 - ORR1C1 LTR MaLR 0 378 6 4 652 240 295 10 10 chr13 8792079 8792175 -111492137 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 652 261 111 15 45 chr13 8792181 8792247 -111492065 + GA-rich Low_complexity Low_complexity 3 66 0 4 652 482 337 25 30 chr13 8793056 8793258 -111491054 + RMER30 DNA MER1_type 1 201 -1 4 652 375 316 0 95 chr13 8793616 8793709 -111490603 - MTEa LTR MaLR -228 151 65 4 652 2274 156 135 24 chr13 8793709 8794214 -111490098 - RLTR31_Mm LTR ERVK 0 561 1 4 652 375 316 0 95 chr13 8794214 8794267 -111490045 - MTEa LTR MaLR -315 64 19 4 652 446 242 0 0 chr13 8794387 8794482 -111489830 - ORR1D2 LTR MaLR -2 377 283 4 652 465 250 94 19 chr13 8794475 8794634 -111489678 - ORR1D2 LTR MaLR -195 175 5 4 652 6892 58 28 21 chr13 8794768 8795683 -111488629 + L1_Mus1 LINE L1 5676 6567 0 4 652 693 226 138 155 chr13 8796165 8796527 -111487785 + MTE2a LTR MaLR 19 374 -5 4 652 405 0 0 0 chr13 8796541 8796586 -111487726 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 652 311 305 36 12 chr13 8796690 8796773 -111487539 - B1F1 SINE Alu -52 97 13 4 652 219 390 0 31 chr13 8796773 8796788 -111487524 - ID_B1 SINE B4 -49 175 81 4 652 390 286 0 9 chr13 8797105 8797211 -111487101 + L1MEc LINE L1 607 711 -5689 4 652 1131 57 0 7 chr13 8797286 8797427 -111486885 + B1_Mus1 SINE Alu 1 140 -8 4 652 28 0 0 0 chr13 8797427 8797455 -111486857 + AT_rich Low_complexity Low_complexity 1 28 0 4 652 331 272 117 6 chr13 8797455 8797618 -111486694 + L1MEc LINE L1 750 930 -5470 4 652 1131 266 131 54 chr13 8797762 8798579 -111485733 + L1MA6 LINE L1 5417 6270 -30 4 652 185 211 18 0 chr13 8798597 8798654 -111485658 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 4 652 486 258 85 8 chr13 8798770 8798899 -111485413 + RSINE1 SINE B4 3 141 -24 4 652 189 74 0 0 chr13 8798912 8798939 -111485373 + (GGAA)n Simple_repeat Simple_repeat 3 29 0 4 652 1044 0 0 95 chr13 8798941 8799130 -111485182 + (GGGA)n Simple_repeat Simple_repeat 4 174 0 4 652 624 203 94 0 chr13 8799134 8799262 -111485050 - B1_Mur2 SINE Alu -7 142 3 4 652 220 234 0 30 chr13 8799539 8799605 -111484707 + GA-rich Low_complexity Low_complexity 4 67 0 4 652 227 306 10 48 chr13 8799985 8800088 -111484224 + MARNA DNA Mariner 143 241 -345 4 652 385 344 0 12 chr13 8800526 8800691 -111483621 + RSINE1 SINE B4 2 164 -1 4 652 750 101 0 0 chr13 8800863 8800972 -111483340 + (TGGA)n Simple_repeat Simple_repeat 3 111 0 4 652 276 213 0 0 chr13 8801567 8801628 -111482684 + (CACG)n Simple_repeat Simple_repeat 4 64 0 4 652 279 0 0 0 chr13 8801697 8801728 -111482584 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 652 686 224 0 0 chr13 8801732 8801866 -111482446 - B3A SINE B2 -51 147 14 4 652 22 0 0 0 chr13 8802015 8802037 -111482275 + AT_rich Low_complexity Low_complexity 1 22 0 4 652 183 80 0 0 chr13 8802367 8802392 -111481920 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 652 230 260 172 30 chr13 8806557 8806656 -111477656 + PB1 SINE Alu 1 113 -14 4 652 2699 133 11 17 chr13 8807197 8807663 -111476649 - L1_Mur2 LINE L1 -844 5042 4580 4 652 999 92 28 7 chr13 8807663 8807805 -111476507 + B1_Mus1 SINE Alu 1 145 -3 4 652 39362 8 2 2 chr13 8807812 8814209 -111470103 + L1Md_A LINE L1 1 5586 -297 4 652 9134 6 0 0 chr13 8814209 8815205 -111469107 + L1Md_A LINE L1 5587 6582 0 4 652 3580 103 24 14 chr13 8815220 8815770 -111468542 - L1_Mur2 LINE L1 -1292 4585 4031 4 652 6699 160 69 20 chr13 8815778 8817534 -111466778 + Lx2B LINE L1 5168 6989 -11 4 652 2115 148 56 34 chr13 8818116 8818528 -111465784 + MTC LTR MaLR 1 421 0 4 652 1037 247 35 19 chr13 8820233 8820489 -111463823 + B4A SINE B4 10 269 -23 4 652 372 267 51 0 chr13 8821920 8822058 -111462254 - B3 SINE B2 -6 192 41 4 652 736 165 90 0 chr13 8823034 8823167 -111461145 - Lx9 LINE L1 -350 7294 7150 4 652 375 169 73 95 chr13 8823201 8823232 -111461080 + Lx9 LINE L1 7503 7528 -116 4 652 1369 95 11 0 chr13 8823232 8823422 -111460890 + B2_Mm1t SINE B2 1 192 -1 4 652 375 169 73 95 chr13 8823422 8823527 -111460785 + Lx9 LINE L1 7529 7636 -8 4 652 532 190 0 0 chr13 8823549 8823649 -111460663 + B3 SINE B2 1 100 -116 4 652 945 124 28 0 chr13 8823712 8823857 -111460455 + B1_Mur4 SINE Alu 1 149 -1 4 652 1245 133 0 0 chr13 8824170 8824350 -111459962 + B2_Mm2 SINE B2 2 181 -14 4 652 27 29 0 0 chr13 8824534 8824568 -111459744 + AT_rich Low_complexity Low_complexity 1 34 0 4 652 377 200 182 15 chr13 8824635 8824772 -111459540 + RSINE1 SINE B4 4 163 -2 4 652 250 278 96 73 chr13 8825475 8825611 -111458701 + ID_B1 SINE B4 78 216 -8 4 652 407 267 25 25 chr13 8825498 8825617 -111458695 + B1F SINE Alu 29 147 -2 4 652 1532 153 63 115 chr13 8827568 8827915 -111456397 + ORR1A4 LTR MaLR 1 329 0 4 652 223 283 33 0 chr13 8827938 8827998 -111456314 + ID4 SINE ID 4 65 -18 4 652 225 0 0 0 chr13 8828020 8828045 -111456267 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 652 1875 133 15 25 chr13 8828156 8828480 -111455832 - ORR1C1 LTR MaLR -57 321 1 4 652 732 54 0 0 chr13 8828736 8828829 -111455483 + (GGAAA)n Simple_repeat Simple_repeat 2 94 0 4 652 202 114 86 0 chr13 8829277 8829312 -111455000 + G-rich Low_complexity Low_complexity 5 42 0 4 652 913 226 20 0 chr13 8831240 8831439 -111452873 - B3 SINE B2 0 216 14 5 652 427 240 73 0 chr13 8831823 8831919 -111452393 + B1_Mm SINE Alu 35 137 -10 5 652 3034 171 52 8 chr13 8831941 8832464 -111451848 + RMER1B Other Other 510 1055 -11 5 652 798 109 0 0 chr13 8832464 8832583 -111451729 + (TAGA)n Simple_repeat Simple_repeat 4 122 0 5 652 362 228 252 9 chr13 8832597 8832712 -111451600 + B1_Mur2 SINE Alu 2 144 -5 5 652 355 242 155 0 chr13 8833588 8833749 -111450563 + L1MC4 LINE L1 7177 7362 -680 5 652 552 287 81 58 chr13 8835009 8835268 -111449044 + MLT1E1A LTR MaLR 76 340 -340 5 652 243 281 58 58 chr13 8835534 8835708 -111448604 + MLT1E1A LTR MaLR 402 575 -78 5 652 189 337 80 20 chr13 8837476 8837576 -111446736 - L2 LINE L2 -481 2938 2833 5 652 931 284 51 15 chr13 8837616 8837949 -111446363 + MLT1B LTR MaLR 1 345 -45 5 652 218 244 154 32 chr13 8838196 8838319 -111445993 - L2 LINE L2 -994 2425 2288 5 652 258 264 85 62 chr13 8838981 8839110 -111445202 + B1F SINE Alu 16 147 -2 5 652 231 146 0 0 chr13 8839764 8839805 -111444507 + (TATATG)n Simple_repeat Simple_repeat 5 45 0 5 652 260 311 155 49 chr13 8839987 8840129 -111444183 - MLT1A LTR MaLR -76 298 142 5 652 2016 99 159 51 chr13 8840250 8840436 -111443876 + ORR1B1 LTR MaLR 5 224 -170 5 652 1389 94 28 0 chr13 8840436 8840617 -111443695 + B2_Mm1t SINE B2 3 188 -5 5 652 2016 99 159 51 chr13 8840617 8840782 -111443530 + ORR1B1 LTR MaLR 225 394 0 5 652 601 341 139 21 chr13 8840794 8841224 -111443088 - MLT1A-int LTR MaLR 0 1735 895 5 652 292 269 59 85 chr13 8841238 8841356 -111442956 + PB1D10 SINE Alu 2 116 -1 5 652 1263 61 0 0 chr13 8841358 8841505 -111442807 + B1_Mus2 SINE Alu 1 147 0 5 652 1305 41 0 0 chr13 8842845 8842992 -111441320 + B1_Mus2 SINE Alu 1 147 0 5 652 1058 70 0 7 chr13 8843687 8843830 -111440482 - B1_Mus1 SINE Alu 0 148 7 5 652 23 0 0 0 chr13 8844188 8844211 -111440101 + AT_rich Low_complexity Low_complexity 1 23 0 5 652 402 74 0 0 chr13 8844689 8844743 -111439569 + (CCTG)n Simple_repeat Simple_repeat 2 55 0 5 652 842 266 43 5 chr13 8845188 8845396 -111438916 + B3 SINE B2 1 216 0 5 652 45 0 0 0 chr13 8845396 8845441 -111438871 + AT_rich Low_complexity Low_complexity 1 45 0 5 652 317 304 0 0 chr13 8846054 8846123 -111438189 + B3 SINE B2 15 83 -133 5 652 240 59 0 0 chr13 8846244 8846278 -111438034 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 652 891 209 130 5 chr13 8847038 8847230 -111437082 - B3 SINE B2 0 216 1 5 652 1270 55 0 0 chr13 8848313 8848459 -111435853 + B1_Mus2 SINE Alu 2 147 0 5 652 262 267 40 13 chr13 8848534 8848610 -111435702 - PB1D10 SINE Alu -11 106 29 5 652 349 266 0 8 chr13 8849275 8849400 -111434912 + GA-rich Low_complexity Low_complexity 2 125 0 5 652 1155 50 50 0 chr13 8849513 8849653 -111434659 + B1_Mus1 SINE Alu 2 148 0 5 652 212 304 120 56 chr13 8849732 8849840 -111434472 - L2c LINE L2 -10 3377 3263 5 652 925 82 0 45 chr13 8850736 8850915 -111433397 + (GAAA)n Simple_repeat Simple_repeat 4 174 0 5 652 791 204 14 0 chr13 8850930 8851072 -111433240 + B1_Mur2 SINE Alu 1 144 -5 5 652 951 238 52 5 chr13 8853505 8853716 -111430596 + ID_B1 SINE B4 2 222 -2 5 652 198 0 0 0 chr13 8855135 8855157 -111429155 + (A)n Simple_repeat Simple_repeat 1 22 0 5 652 985 248 29 19 chr13 8855729 8855935 -111428377 - B3 SINE B2 -7 209 2 5 652 24 0 0 0 chr13 8856031 8856055 -111428257 + AT_rich Low_complexity Low_complexity 1 24 0 5 652 21 36 0 0 chr13 8856185 8856213 -111428099 + AT_rich Low_complexity Low_complexity 1 28 0 5 652 24 0 0 0 chr13 8856278 8856302 -111428010 + AT_rich Low_complexity Low_complexity 1 24 0 5 652 267 191 176 0 chr13 8856338 8856406 -111427906 + ID4_ SINE ID 4 83 0 5 652 1260 48 0 0 chr13 8856593 8856738 -111427574 - B1_Mus2 SINE Alu -1 146 2 5 652 644 319 68 31 chr13 8856755 8857137 -111427175 + RMER5 LTR ERV1 69 464 -70 5 652 661 296 152 10 chr13 8858367 8858664 -111425648 + MLT1B LTR MaLR 44 382 -8 5 652 328 258 9 76 chr13 8858837 8858942 -111425370 + PB1D10 SINE Alu 17 114 -3 5 652 306 0 0 0 chr13 8859001 8859035 -111425277 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 652 1155 77 0 0 chr13 8859306 8859449 -111424863 + B1_Mus1 SINE Alu 5 147 -1 5 652 223 49 24 24 chr13 8859458 8859500 -111424812 + (TAAAAA)n Simple_repeat Simple_repeat 1 42 0 5 652 212 121 77 0 chr13 8859987 8860078 -111424234 + (TA)n Simple_repeat Simple_repeat 1 98 0 5 652 815 156 47 8 chr13 8860082 8860211 -111424101 + B1_Mur2 SINE Alu 1 134 -15 5 652 483 250 143 55 chr13 8860760 8860805 -111423507 + B3 SINE B2 2 46 -170 5 652 1292 34 0 14 chr13 8860805 8860953 -111423359 + B1_Mus2 SINE Alu 2 147 0 5 652 483 250 143 55 chr13 8860953 8861089 -111423223 + B3 SINE B2 47 199 -17 5 652 248 314 92 46 chr13 8861275 8861515 -111422797 - L1MDa LINE L1 -1793 4744 4494 5 652 257 260 106 8 chr13 8861517 8861649 -111422663 - L1M5 LINE L1 -2099 4047 3903 5 652 1325 40 0 0 chr13 8861666 8861814 -111422498 - B1_Mus1 SINE Alu 0 148 1 5 652 527 236 29 74 chr13 8862073 8862260 -111422052 - L1M2 LINE L1 -642 5649 5423 5 652 208 0 0 59 chr13 8862262 8862296 -111422016 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 652 952 219 230 5 chr13 8862318 8862622 -111421690 + MTD LTR MaLR 15 416 -3 5 652 729 182 95 0 chr13 8862622 8862759 -111421553 + B1_Mur4 SINE Alu 1 150 0 5 652 422 220 144 0 chr13 8862816 8862934 -111421378 - L1_Mur3 LINE L1 -444 5436 5302 5 652 957 144 234 0 chr13 8862934 8863101 -111421211 + B3 SINE B2 2 207 -9 5 652 939 55 150 0 chr13 8863145 8863272 -111421040 + B1_Mus2 SINE Alu 2 147 0 5 652 589 268 179 14 chr13 8863356 8863741 -111420571 - L1M2 LINE L1 -876 5267 4780 5 652 492 62 0 0 chr13 8863818 8863882 -111420430 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 652 353 274 138 76 chr13 8863892 8864168 -111420144 - L1MDa LINE L1 -5513 1120 828 5 652 1087 217 0 0 chr13 8864247 8864436 -111419876 - B3 SINE B2 -19 197 9 5 652 375 309 84 44 chr13 8864490 8864693 -111419619 - L1MDa LINE L1 -6351 282 72 5 652 686 304 107 78 chr13 8865741 8866087 -111418225 + MTEa LTR MaLR 19 374 -5 5 652 2175 109 26 67 chr13 8866155 8866498 -111417814 + ORR1A4 LTR MaLR 1 329 0 5 652 452 252 9 0 chr13 8866548 8866655 -111417657 + ID_B1 SINE B4 117 224 0 5 652 311 290 50 10 chr13 8866650 8866751 -111417561 + B3A SINE B2 6 110 -88 5 652 1076 158 22 0 chr13 8866756 8866939 -111417373 - URR1B DNA MER1_type -7 218 32 5 652 1136 52 15 0 chr13 8867372 8867507 -111416805 + B1_Mus2 SINE Alu 1 137 -10 5 652 297 51 0 0 chr13 8867507 8867546 -111416766 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 652 630 186 12 141 chr13 8867600 8867763 -111416549 + B1_Mur3 SINE Alu 3 144 -5 5 652 267 253 25 51 chr13 8867779 8867858 -111416454 + ID4_ SINE ID 1 77 -6 5 652 23 0 0 0 chr13 8868623 8868646 -111415666 + AT_rich Low_complexity Low_complexity 1 23 0 5 652 213 333 12 0 chr13 8868783 8868864 -111415448 + L3 LINE CR1 3559 3640 -849 5 652 866 82 276 33 chr13 8871421 8871573 -111412739 + B2_Mm2 SINE B2 1 189 -6 5 652 1887 175 29 3 chr13 8871904 8872253 -111412059 + ORR1B2 LTR MaLR 2 359 -8 5 652 782 254 73 31 chr13 8872252 8872338 -111411974 + B3 SINE B2 9 95 -121 5 652 2879 161 18 29 chr13 8872338 8872850 -111411462 - RLTR19C LTR ERVK 0 506 1 5 652 782 254 73 31 chr13 8872850 8872954 -111411358 + B3 SINE B2 96 207 -9 5 652 848 212 14 0 chr13 8872978 8873124 -111411188 + B1_Mus1 SINE Alu 1 148 0 5 652 393 301 82 53 chr13 8873360 8873567 -111410745 - ORR1E LTR MaLR -5 354 142 5 652 439 298 0 26 chr13 8873659 8873776 -111410536 - MTE-int LTR MaLR -33 1547 1434 5 652 219 36 0 0 chr13 8873794 8873822 -111410490 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 652 389 380 53 0 chr13 8873825 8873975 -111410337 - B3A SINE B2 -38 160 3 5 652 294 267 112 40 chr13 8873975 8874052 -111410260 - MTE-int LTR MaLR -143 1437 1345 5 652 1758 26 0 0 chr13 8874052 8874243 -111410069 + B2_Mm1a SINE B2 2 192 -1 5 652 294 267 112 40 chr13 8874243 8874306 -111410006 - MTE-int LTR MaLR -236 1344 1286 5 652 2599 46 26 0 chr13 8874404 8874711 -111409601 + L1Md_F3 LINE L1 6256 6570 -14 5 652 236 300 0 0 chr13 8874776 8874836 -111409476 - MTE-int LTR MaLR -310 1270 1211 5 652 2124 213 41 9 chr13 8874836 8875296 -111409016 + Lx5 LINE L1 6576 7050 0 5 652 827 320 94 55 chr13 8875379 8875816 -111408496 - MTE-int LTR MaLR -549 1031 578 5 652 496 235 96 29 chr13 8875830 8875966 -111408346 - ID_B1 SINE B4 0 224 80 5 652 378 0 0 0 chr13 8876024 8876066 -111408246 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 652 269 173 73 83 chr13 8876269 8876371 -111407941 - L1MA4 LINE L1 -364 5936 5836 5 652 6448 56 9 19 chr13 8876548 8877133 -111407179 - RLTR13A3 LTR ERVK 0 978 406 5 652 2897 37 0 0 chr13 8877133 8877459 -111406853 + L1Md_T LINE L1 6256 6581 -1 5 652 6448 56 9 19 chr13 8877459 8877750 -111406562 - RLTR13A3 LTR ERVK -573 405 111 5 652 970 236 88 48 chr13 8877759 8878089 -111406223 - MTE-int LTR MaLR -1196 384 42 5 652 1188 91 0 0 chr13 8878089 8878232 -111406080 + B1_Mm SINE Alu 2 144 -3 5 652 228 135 0 0 chr13 8878234 8878271 -111406041 + (A)n Simple_repeat Simple_repeat 1 37 0 5 652 360 322 0 11 chr13 8878405 8878499 -111405813 + PB1D10 SINE Alu 1 93 -24 5 652 5199 44 2 2 chr13 8878665 8879252 -111405060 - LTRIS_Mus LTR ERV1 0 587 1 5 652 607 191 247 0 chr13 8879344 8879506 -111404806 - B3 SINE B2 -9 207 6 5 652 400 254 78 17 chr13 8879717 8879833 -111404479 + B1F SINE Alu 10 132 -17 5 652 252 86 0 0 chr13 8879837 8879872 -111404440 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 652 397 263 50 43 chr13 8879899 8880038 -111404274 - MTEb LTR MaLR 0 379 240 5 652 918 263 39 100 chr13 8880169 8880367 -111403945 - B4 SINE B4 -23 269 81 5 652 429 223 89 80 chr13 8880367 8880479 -111403833 - PB1D9 SINE Alu -7 113 1 5 652 918 263 39 100 chr13 8880479 8880559 -111403753 - B4 SINE B4 -212 80 8 5 652 400 320 32 0 chr13 8880674 8880799 -111403513 + B1F SINE Alu 12 140 -9 6 652 256 307 136 79 chr13 8881075 8881252 -111403060 - MTEb LTR MaLR -103 256 70 5 652 1312 41 0 0 chr13 8882141 8882288 -111402024 + B1_Mus2 SINE Alu 1 147 0 6 652 368 312 0 11 chr13 8882317 8882411 -111401901 + PB1D10 SINE Alu 1 93 -24 6 652 604 189 236 12 chr13 8882642 8882826 -111401486 - B3 SINE B2 -9 207 6 6 652 574 199 92 7 chr13 8883046 8883198 -111401114 + Charlie1a DNA MER1_type 716 880 -575 6 652 594 299 61 30 chr13 8883200 8883352 -111400960 + B4A SINE B4 2 168 -124 6 652 1767 26 0 0 chr13 8883352 8883541 -111400771 + B2_Mm1a SINE B2 1 189 -4 6 652 594 298 59 29 chr13 8883541 8883602 -111400710 + B4A SINE B4 169 227 -65 6 652 368 192 283 0 chr13 8883602 8883701 -111400611 + RSINE1 SINE B4 2 128 -37 6 652 1422 91 27 0 chr13 8883952 8884138 -111400174 - B2_Mm2 SINE B2 -4 191 1 6 652 892 144 0 0 chr13 8884211 8884343 -111399969 - B1_Mus2 SINE Alu -6 141 10 6 652 264 159 192 55 chr13 8886245 8886318 -111397994 - PB1D9 SINE Alu -9 111 29 6 652 243 0 0 0 chr13 8886533 8886560 -111397752 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 652 473 244 0 0 chr13 8887460 8887550 -111396762 - PB1D10 SINE Alu -5 112 23 6 652 262 356 77 0 chr13 8887637 8887741 -111396571 - PB1D9 SINE Alu -8 112 1 6 652 558 198 333 13 chr13 8887786 8887945 -111396367 - B3 SINE B2 -6 210 1 6 652 23 0 0 0 chr13 8887945 8887968 -111396344 + AT_rich Low_complexity Low_complexity 1 23 0 6 652 865 257 49 10 chr13 8887970 8888174 -111396138 - B3 SINE B2 -2 214 3 6 652 189 0 0 0 chr13 8888180 8888201 -111396111 + (TTTTA)n Simple_repeat Simple_repeat 4 24 0 6 652 492 257 33 56 chr13 8888207 8888391 -111395921 - ID_B1 SINE B4 0 224 2 6 652 463 250 35 9 chr13 8888391 8888493 -111395819 + B1_Mur1 SINE Alu 38 142 -7 6 652 183 139 0 0 chr13 8888518 8888554 -111395758 + (TAGA)n Simple_repeat Simple_repeat 1 36 0 6 652 581 217 9 34 chr13 8888698 8888842 -111395470 - B1_Mur1 SINE Alu -3 146 1 6 652 1077 206 15 0 chr13 8889089 8889293 -111395019 + B3 SINE B2 2 208 -8 6 652 588 198 119 22 chr13 8889385 8889519 -111394793 - B1_Mur1 SINE Alu -1 148 2 6 652 219 224 35 0 chr13 8890297 8890355 -111393957 + B4 SINE B4 2 61 -231 6 652 369 0 0 0 chr13 8890432 8890473 -111393839 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 652 334 282 198 10 chr13 8890485 8890682 -111393630 - MER2 DNA MER2_type -21 324 91 6 652 690 171 1 10 chr13 8891088 8891213 -111393099 - B1_Mus1 SINE Alu -21 127 2 6 652 30 27 0 0 chr13 8891583 8891620 -111392692 + AT_rich Low_complexity Low_complexity 1 37 0 6 652 1506 48 21 0 chr13 8892213 8892401 -111391911 - B2_Mm1a SINE B2 0 193 2 6 652 706 268 92 97 chr13 8892574 8892999 -111391313 - RLTR23 LTR ERV1 0 430 8 6 652 374 316 119 31 chr13 8893034 8893295 -111391017 - B4 SINE B4 0 292 9 6 652 855 251 21 30 chr13 8893452 8893686 -111390626 + B4A SINE B4 1 232 -60 6 652 288 200 94 0 chr13 8893693 8893778 -111390534 + PB1D9 SINE Alu 27 119 -1 6 652 1418 78 16 0 chr13 8893919 8894110 -111390202 - B2_Mm2 SINE B2 0 195 2 6 652 385 231 111 0 chr13 8894261 8894369 -111389943 - B1_Mur2 SINE Alu -27 122 3 6 652 327 250 82 61 chr13 8894425 8894523 -111389789 - B4A SINE B4 0 292 193 6 652 1896 102 31 22 chr13 8894524 8894843 -111389469 - RLTRETN_Mm LTR ERVK 0 322 1 6 652 18961 141 26 19 chr13 8894843 8901674 -111382638 - ETnERV2-int LTR ERVK -172 7234 1 6 652 1907 99 31 22 chr13 8901674 8901993 -111382319 - RLTRETN_Mm LTR ERVK 0 322 1 6 652 328 289 82 52 chr13 8901994 8902129 -111382183 - B4A SINE B4 -96 196 58 6 652 482 264 9 0 chr13 8902106 8902216 -111382096 - B4A SINE B4 -165 127 17 6 652 198 0 0 0 chr13 8902593 8902615 -111381697 + (GTTTG)n Simple_repeat Simple_repeat 2 23 0 6 652 1106 44 0 21 chr13 8902615 8902755 -111381557 - B1_Mm SINE Alu -10 137 1 6 652 905 205 190 12 chr13 8903471 8903713 -111380599 - MTD LTR MaLR -9 410 126 6 652 1353 89 0 31 chr13 8903899 8904095 -111380217 + B2_Mm2 SINE B2 2 191 -4 6 652 1080 71 42 7 chr13 8904137 8904279 -111380033 + B1_Mus1 SINE Alu 2 148 0 6 652 5546 64 11 14 chr13 8904591 8904725 -111379587 + RLTR22_Mus LTR ERVK 5 137 -1671 6 652 1598 146 78 88 chr13 8904725 8905122 -111379190 - RLTR9C LTR ERVK 0 393 1 6 652 5546 64 11 14 chr13 8905122 8905792 -111378520 + RLTR22_Mus LTR ERVK 138 807 -1001 6 652 253 286 65 108 chr13 8906035 8906266 -111378046 + RMER12 LTR ERVK 1102 1322 0 6 652 1675 138 104 18 chr13 8906348 8906674 -111377638 + ORR1B2 LTR MaLR 2 355 -12 6 652 4478 56 16 12 chr13 8906944 8907502 -111376810 + LTRIS2 LTR ERV1 5 564 0 6 652 1644 145 15 70 chr13 8907945 8908286 -111376026 + RLTRETN_Mm LTR ERVK 1 322 0 6 652 22801 148 45 61 chr13 8908300 8911067 -111373245 + MMETn-int LTR ERVK 17 2690 -2154 6 652 207 0 0 0 chr13 8911067 8911090 -111373222 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 6 652 22801 148 45 61 chr13 8911090 8912016 -111372296 + MMETn-int LTR ERVK 2691 3642 -1202 6 652 252 0 0 0 chr13 8912016 8912044 -111372268 + (C)n Simple_repeat Simple_repeat 1 28 0 6 81 22801 148 45 61 chr13 8912044 8913253 -111371059 + MMETn-int LTR ERVK 3643 4843 -1 6 653 1714 130 18 73 chr13 8913253 8913594 -111370718 + RLTRETN_Mm LTR ERVK 1 322 0 6 653 475 155 0 0 chr13 8913602 8913673 -111370639 + MMETn-int LTR ERVK 10 80 -4764 6 653 564 155 9 2 chr13 8913681 8913791 -111370521 - MTD LTR MaLR -292 115 1 6 653 315 0 0 0 chr13 8914275 8914310 -111370002 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 653 2014 47 43 0 chr13 8914398 8914651 -111369661 + L1_Mus1 LINE L1 6304 6567 0 6 653 628 299 62 58 chr13 8914762 8915053 -111369259 + B4A SINE B4 1 292 0 6 653 457 301 148 36 chr13 8915411 8915714 -111368598 + RMER5 LTR ERV1 40 376 -158 6 653 360 148 0 0 chr13 8915714 8915775 -111368537 + (T)n Simple_repeat Simple_repeat 1 61 0 6 653 554 225 68 18 chr13 8915776 8915939 -111368373 + RMER5 LTR ERV1 364 534 0 6 653 1119 48 78 6 chr13 8916052 8916219 -111368093 - RLTR44D LTR ERVK -307 179 1 6 653 1019 124 0 0 chr13 8916368 8916505 -111367807 + B1_Mur4 SINE Alu 1 137 -13 6 653 439 261 163 28 chr13 8916598 8916886 -111367426 + L1M4 LINE L1 2711 3037 -3109 6 653 574 314 77 36 chr13 8916893 8917167 -111367145 + B4 SINE B4 2 286 -6 6 653 988 58 7 35 chr13 8917260 8917402 -111366910 + B1_Mus2 SINE Alu 10 147 0 6 653 208 296 14 0 chr13 8917775 8917846 -111366466 + (TG)n Simple_repeat Simple_repeat 1 72 0 6 653 232 196 0 18 chr13 8917905 8917962 -111366350 + T-rich Low_complexity Low_complexity 4 59 0 6 653 482 260 27 69 chr13 8918026 8918252 -111366060 - B4A SINE B4 -63 229 22 6 653 465 285 70 103 chr13 8918257 8918752 -111365560 + L1MC2 LINE L1 5623 6015 -318 6 653 1102 208 14 0 chr13 8918782 8918994 -111365318 + B3 SINE B2 2 216 0 6 653 684 283 73 26 chr13 8919145 8919417 -111364895 + L1MC1 LINE L1 6034 6318 -15 6 653 1909 109 12 24 chr13 8919611 8919941 -111364371 + RLTR13D2 LTR ERVK 698 1023 0 6 653 255 286 32 0 chr13 8919941 8920004 -111364308 + ID4_ SINE ID 8 72 -11 6 653 264 325 93 39 chr13 8920034 8920239 -111364073 + L1M4 LINE L1 3563 3778 -2368 6 653 594 145 0 0 chr13 8920745 8920869 -111363443 + (TC)n Simple_repeat Simple_repeat 1 124 0 6 653 306 0 0 0 chr13 8920869 8920903 -111363409 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 653 782 241 52 127 chr13 8921017 8921474 -111362838 + RLTR23 LTR ERV1 8 430 0 6 653 435 272 76 98 chr13 8921641 8921956 -111362356 + MTEa LTR MaLR 5 377 -2 6 653 394 306 86 6 chr13 8921958 8922132 -111362180 + MLT2B1 LTR ERVL 80 267 -253 6 653 24 0 0 0 chr13 8922159 8922183 -111362129 + AT_rich Low_complexity Low_complexity 1 24 0 6 653 22 0 0 0 chr13 8922207 8922229 -111362083 + AT_rich Low_complexity Low_complexity 1 22 0 6 653 2833 68 31 63 chr13 8922440 8922865 -111361447 + RLTR10A LTR ERVK 1 411 0 6 653 4355 28 0 0 chr13 8922866 8923361 -111360951 - L1Md_A LINE L1 0 6582 6088 6 653 4122 139 84 12 chr13 8923654 8924411 -111359901 + L1Md_F LINE L1 358 1157 -5462 6 653 622 165 5 128 chr13 8924474 8924662 -111359650 - RLTRETN_Mm LTR ERVK -157 165 1 6 653 14393 154 83 19 chr13 8924662 8925621 -111358691 + L1VL1 LINE L1 1185 2154 -3723 6 653 1243 41 0 0 chr13 8925621 8925767 -111358545 + B1_Mm SINE Alu 2 147 0 6 653 14393 173 100 21 chr13 8925767 8927903 -111356409 + L1VL1 LINE L1 2155 4522 -1355 6 653 704 126 8 0 chr13 8927924 8928043 -111356269 + (TC)n Simple_repeat Simple_repeat 2 121 0 6 653 474 18 0 0 chr13 8930358 8930413 -111353899 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 653 243 0 0 0 chr13 8930519 8930546 -111353766 + (T)n Simple_repeat Simple_repeat 1 27 0 6 653 351 0 0 0 chr13 8931155 8931194 -111353118 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 653 369 159 14 43 chr13 8931194 8931332 -111352980 + GA-rich Low_complexity Low_complexity 5 138 0 6 653 234 79 34 136 chr13 8931316 8931463 -111352849 + (CAGAGA)n Simple_repeat Simple_repeat 3 134 0 6 653 378 0 0 0 chr13 8932255 8932297 -111352015 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 653 268 238 0 0 chr13 8932359 8932422 -111351890 - MTEa LTR MaLR -5 374 312 6 653 508 261 162 23 chr13 8932737 8932953 -111351359 + RMER21B LTR ERV1 320 565 -277 6 653 12114 86 11 24 chr13 8933970 8934794 -111349518 - L1Md_F2 LINE L1 -3 6579 5771 6 653 2786 68 141 137 chr13 8934794 8935304 -111349008 - RLTR1B LTR ERV1 0 512 1 6 653 12114 82 8 12 chr13 8935304 8936829 -111347483 - L1Md_F2 LINE L1 -113 5770 4232 6 653 617 276 14 103 chr13 8936836 8936860 -111347452 - B3A SINE B2 -3 195 178 6 653 369 0 0 0 chr13 8936860 8936901 -111347411 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 653 668 260 8 73 chr13 8936901 8936951 -111347361 - B3 SINE B2 -21 177 129 6 653 2785 57 58 33 chr13 8936951 8937350 -111346962 + RLTR9E LTR ERVK 1 409 0 6 653 668 254 6 62 chr13 8937350 8937488 -111346824 - B3 SINE B2 -88 128 1 6 653 1738 173 140 0 chr13 8937774 8938139 -111346173 + MTC LTR MaLR 1 416 -5 6 653 560 107 10 0 chr13 8938451 8938554 -111345758 + (TG)n Simple_repeat Simple_repeat 2 105 0 6 653 364 275 120 0 chr13 8938611 8938753 -111345559 - B4A SINE B4 -22 270 112 6 653 241 277 31 0 chr13 8938796 8938861 -111345451 - RSINE1 SINE B4 -17 148 82 7 653 317 237 13 26 chr13 8938939 8939017 -111345295 - B4 SINE B4 -209 83 7 6 653 830 152 35 0 chr13 8940310 8940455 -111343857 - B1_Mur4 SINE Alu 0 150 1 7 653 408 20 0 0 chr13 8942162 8942211 -111342101 + (TC)n Simple_repeat Simple_repeat 1 49 0 7 653 1137 28 0 0 chr13 8942211 8942351 -111341961 + (CA)n Simple_repeat Simple_repeat 1 141 0 7 653 386 288 83 8 chr13 8943071 8943204 -111341108 - B1_Mur1 SINE Alu -5 144 2 7 653 1032 262 25 7 chr13 8943809 8944086 -111340226 - MTD LTR MaLR -54 365 84 7 653 811 157 0 8 chr13 8944120 8944248 -111340064 - B1_Mur3 SINE Alu -18 131 5 7 653 234 135 56 37 chr13 8944261 8944315 -111339997 - MTD LTR MaLR -331 90 36 7 653 1261 245 44 111 chr13 8944721 8945331 -111338981 + RMER1B Other Other 55 752 -314 7 653 501 309 43 74 chr13 8945336 8945727 -111338585 + BGLII_B LTR ERVK 1 379 -62 7 653 1273 173 87 28 chr13 8945822 8946108 -111338204 + RMER1B Other Other 761 1063 -3 7 653 563 216 24 102 chr13 8946213 8946507 -111337805 - MTC-int LTR MaLR 0 1258 988 7 653 309 168 262 86 chr13 8946508 8946574 -111337738 - Lx9 LINE L1 -7 7637 7576 7 653 1098 66 7 0 chr13 8946574 8946711 -111337601 - B1_Mus2 SINE Alu -9 138 1 7 653 309 168 262 86 chr13 8946711 8946781 -111337531 - Lx9 LINE L1 -69 7575 7478 7 653 462 18 0 0 chr13 8946781 8946836 -111337476 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 653 309 168 262 86 chr13 8946836 8946919 -111337393 - Lx9 LINE L1 -167 7477 7378 7 653 353 241 13 0 chr13 8947055 8947134 -111337178 + ID2 SINE ID 1 80 -3 7 653 490 218 18 9 chr13 8947192 8947303 -111337009 - PB1D9 SINE Alu -7 113 2 7 653 205 146 0 47 chr13 8948340 8948383 -111335929 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 7 653 426 308 6 19 chr13 8948562 8948721 -111335591 + (TGGA)n Simple_repeat Simple_repeat 3 159 0 7 653 285 265 12 12 chr13 8948723 8948807 -111335505 + MTA_Mm LTR MaLR 3 86 -310 7 653 234 135 56 37 chr13 8949276 8949330 -111334982 + MTD LTR MaLR 36 90 -331 7 653 798 163 0 15 chr13 8949343 8949474 -111334838 + B1_Mur3 SINE Alu 5 133 -16 7 653 198 0 0 0 chr13 8949475 8949497 -111334815 + (T)n Simple_repeat Simple_repeat 1 22 0 7 653 1005 254 24 48 chr13 8949517 8949575 -111334737 + MTD LTR MaLR 84 141 -278 7 653 5082 37 0 0 chr13 8949575 8950168 -111334144 + L1Md_T LINE L1 5989 6581 -1 7 653 1005 254 24 48 chr13 8950168 8950398 -111333914 + MTD LTR MaLR 142 365 -54 7 653 1734 209 12 12 chr13 8950438 8950773 -111333539 - Lx5 LINE L1 -193 6857 6523 7 653 334 258 0 31 chr13 8950778 8950874 -111333438 - MTA_Mm LTR MaLR -301 95 3 7 653 426 308 6 19 chr13 8950876 8951035 -111333277 + (TCCA)n Simple_repeat Simple_repeat 3 159 0 7 653 205 146 0 47 chr13 8951214 8951257 -111333055 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 7 653 490 218 18 9 chr13 8952294 8952405 -111331907 + PB1D9 SINE Alu 2 113 -7 7 653 353 241 13 0 chr13 8952463 8952542 -111331770 - ID2 SINE ID -3 80 1 7 653 289 192 233 67 chr13 8952678 8952761 -111331551 + Lx9 LINE L1 7378 7477 -167 7 653 528 16 0 0 chr13 8952761 8952822 -111331490 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 653 289 192 233 67 chr13 8952822 8952892 -111331420 + Lx9 LINE L1 7478 7575 -69 7 653 1105 58 7 0 chr13 8952892 8953029 -111331283 + B1_Mus2 SINE Alu 1 138 -9 7 653 289 192 233 67 chr13 8953029 8953097 -111331215 + Lx9 LINE L1 7576 7636 -8 7 653 563 216 24 102 chr13 8953098 8953392 -111330920 + MTC-int LTR MaLR 988 1258 0 7 653 1266 173 87 28 chr13 8953497 8953783 -111330529 - RMER1B Other Other -3 1063 761 7 653 499 309 43 74 chr13 8953878 8954269 -111330043 - BGLII_B LTR ERVK -62 379 1 7 653 1283 232 51 111 chr13 8954274 8954881 -111329431 - RMER1B Other Other -314 752 55 7 653 234 135 56 37 chr13 8955287 8955341 -111328971 + MTD LTR MaLR 36 90 -331 7 653 811 157 0 8 chr13 8955354 8955482 -111328830 + B1_Mur3 SINE Alu 5 131 -18 7 653 1030 272 22 4 chr13 8955516 8955793 -111328519 + MTD LTR MaLR 84 365 -54 7 653 386 288 83 8 chr13 8956398 8956531 -111327781 + B1_Mur1 SINE Alu 2 144 -5 7 653 1257 61 0 0 chr13 8957252 8957432 -111326880 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 653 315 0 0 0 chr13 8957432 8957466 -111326846 + (GA)n Simple_repeat Simple_repeat 1 35 0 7 653 837 152 35 0 chr13 8959054 8959199 -111325113 + B1_Mur4 SINE Alu 1 150 0 7 653 263 299 15 0 chr13 8960624 8960691 -111323621 + B4 SINE B4 7 74 -218 7 653 263 290 127 22 chr13 8960711 8960845 -111323467 + RSINE1 SINE B4 1 148 -17 7 653 380 282 108 6 chr13 8960888 8961045 -111323267 + B4A SINE B4 112 284 -8 7 653 505 61 24 0 chr13 8961069 8961151 -111323161 + (CA)n Simple_repeat Simple_repeat 2 85 0 7 653 184 283 113 0 chr13 8961283 8961336 -111322976 - MER5A DNA MER1_type -111 78 20 7 653 1869 201 124 26 chr13 8961493 8962295 -111322017 + RLTR13D6 LTR ERVK 1 762 -140 7 653 391 96 0 0 chr13 8962295 8962347 -111321965 + L1Md_F LINE L1 212 263 -6353 7 653 4325 72 105 0 chr13 8962346 8962983 -111321329 + L1Md_F LINE L1 2489 3192 -2691 7 653 4229 70 4 2 chr13 8962981 8963528 -111320784 + L1Md_F LINE L1 5011 5558 -325 7 653 455 215 60 54 chr13 8963528 8963557 -111320755 + RLTR13B1 LTR ERVK 688 711 -144 7 653 7725 54 13 3 chr13 8963557 8964530 -111319782 + L1Md_F2 LINE L1 5588 6570 -12 7 653 726 132 80 7 chr13 8964530 8964667 -111319645 + RLTR13B1 LTR ERVK 747 893 0 7 653 238 280 101 57 chr13 8965007 8965166 -111319146 + LTRIS4 LTR ERV1 319 484 -23 7 653 1765 169 91 0 chr13 8965211 8965542 -111318770 - MTC LTR MaLR -14 407 47 7 653 354 263 0 13 chr13 8965861 8965938 -111318374 + B3 SINE B2 1 76 -140 7 653 468 250 31 18 chr13 8966254 8966395 -111317917 - B1_Mur3 SINE Alu -7 142 5 7 653 737 213 84 25 chr13 8967385 8967587 -111316725 + B3 SINE B2 1 214 -2 7 653 646 233 15 0 chr13 8968328 8968461 -111315851 - B1_Mus1 SINE Alu 0 148 14 7 653 21 0 0 0 chr13 8968493 8968514 -111315798 + AT_rich Low_complexity Low_complexity 1 21 0 7 653 690 297 5 28 chr13 8968778 8968996 -111315316 - MT2B LTR ERVL -4 597 385 7 653 564 288 52 13 chr13 8968995 8969150 -111315162 + B3A SINE B2 11 171 -27 7 653 407 214 75 90 chr13 8969273 8969516 -111314796 - MT2B LTR ERVL -180 313 1 7 653 1171 74 0 0 chr13 8969550 8969698 -111314614 - B1_Mus1 SINE Alu 0 148 1 7 653 271 278 10 20 chr13 8970224 8970323 -111313989 - L1M3 LINE L1 -764 5419 5322 7 653 496 300 162 18 chr13 8970422 8970816 -111313496 - L1M3 LINE L1 -1000 5140 4690 7 653 498 75 0 0 chr13 8971658 8971725 -111312587 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 7 653 210 315 67 0 chr13 8972775 8972864 -111311448 + PB1D10 SINE Alu 13 107 -10 7 653 315 274 19 9 chr13 8974044 8974151 -111310161 + PB1D10 SINE Alu 10 117 0 7 653 604 355 94 23 chr13 8974956 8975340 -111308972 + MER21B LTR ERV1 364 774 -89 7 653 263 294 182 9 chr13 8976082 8976192 -111308120 + ID_B1 SINE B4 83 211 -13 7 653 255 246 92 0 chr13 8977052 8977117 -111307195 + ID4_ SINE ID 3 73 -10 7 653 353 129 14 0 chr13 8977117 8977187 -111307125 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 653 195 42 0 0 chr13 8978075 8978099 -111306213 + (TAA)n Simple_repeat Simple_repeat 2 25 0 7 653 920 132 22 28 chr13 8978164 8978344 -111305968 - L1_Mus3 LINE L1 -7 6631 6453 7 653 1423 75 27 0 chr13 8978383 8978570 -111305742 + B2_Mm2 SINE B2 1 192 -3 7 653 11706 83 77 25 chr13 8979889 8982124 -111302188 + L1VL2 LINE L1 580 2981 -2902 7 653 566 199 54 39 chr13 8982124 8982328 -111301984 + RMER17C LTR ERVK 69 275 -135 7 653 11706 83 77 25 chr13 8982328 8982609 -111301703 + L1VL2 LINE L1 2982 3285 -2598 7 653 22 0 0 0 chr13 8982756 8982778 -111301534 + AT_rich Low_complexity Low_complexity 1 22 0 7 653 1056 44 0 0 chr13 8982955 8983091 -111301221 - B1_Mus2 SINE Alu -6 141 6 7 653 1473 32 20 64 chr13 8983114 8983316 -111300996 - B2_Mm1a SINE B2 0 193 1 7 653 24 32 0 0 chr13 8983563 8983594 -111300718 + AT_rich Low_complexity Low_complexity 1 31 0 7 653 195 42 0 0 chr13 8983650 8983674 -111300638 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 7 653 461 264 0 9 chr13 8983701 8983808 -111300504 + B3 SINE B2 82 187 -29 7 653 1605 32 27 0 chr13 8983997 8984185 -111300127 - B2_Mm1a SINE B2 0 193 1 7 653 198 0 0 0 chr13 8984749 8984771 -111299541 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 653 189 107 0 0 chr13 8984977 8985005 -111299307 + (A)n Simple_repeat Simple_repeat 1 28 0 7 653 243 216 104 39 chr13 8985156 8985233 -111299079 + RLTR25B LTR ERVK 428 509 -519 7 653 731 31 10 0 chr13 8985177 8985275 -111299037 + B1_Mm SINE Alu 49 147 0 7 653 189 0 0 0 chr13 8985275 8985296 -111299016 + (A)n Simple_repeat Simple_repeat 1 21 0 7 653 1423 77 6 0 chr13 8985356 8985539 -111298773 - B2_Mm1a SINE B2 -7 186 3 7 653 657 314 65 38 chr13 8986606 8986897 -111297415 + MER44B DNA MER2_type 3 301 -249 7 653 327 270 64 28 chr13 8987395 8987536 -111296776 + B1F SINE Alu 1 146 -3 7 653 1224 41 0 0 chr13 8988071 8988217 -111296095 + B1_Mm SINE Alu 2 147 0 7 653 450 0 0 0 chr13 8988644 8988694 -111295618 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 653 608 223 33 0 chr13 8989014 8989135 -111295177 + RSINE1 SINE B4 3 127 -38 7 653 336 24 0 0 chr13 8989150 8989191 -111295121 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 653 293 128 0 0 chr13 8989342 8989389 -111294923 + PB1D10 SINE Alu 71 117 0 7 653 267 217 0 0 chr13 8989412 8989472 -111294840 + GA-rich Low_complexity Low_complexity 2 61 0 7 653 28 29 0 0 chr13 8989892 8989927 -111294385 + AT_rich Low_complexity Low_complexity 1 35 0 7 653 294 224 100 10 chr13 8990269 8990380 -111293932 - B1F SINE Alu -2 147 23 7 653 1236 34 7 0 chr13 8991335 8991482 -111292830 + B1_Mus1 SINE Alu 1 148 0 7 653 781 179 14 14 chr13 8993111 8993258 -111291054 - B1_Mur4 SINE Alu 0 150 4 7 653 273 217 174 0 chr13 8993484 8993553 -111290759 + PB1D9 SINE Alu 7 87 -33 7 653 186 43 0 0 chr13 8993765 8993788 -111290524 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 7 653 839 135 81 7 chr13 8993788 8993937 -111290375 - B2_Mm1a SINE B2 -33 160 1 7 653 437 149 333 0 chr13 8994382 8994469 -111289843 - PB1D9 SINE Alu 0 120 5 7 653 1285 102 11 0 chr13 8996446 8996622 -111287690 + B2_Mm1t SINE B2 2 179 -14 8 653 1024 82 0 7 chr13 8996650 8996798 -111287514 + B1_Mus1 SINE Alu 2 148 0 8 653 180 0 0 0 chr13 8996801 8996821 -111287491 + (A)n Simple_repeat Simple_repeat 1 20 0 8 653 319 69 351 19 chr13 8996868 8996979 -111287333 + B2_Mm2 SINE B2 47 194 -1 8 653 1208 55 0 0 chr13 8996980 8997126 -111287186 + B1_Mus2 SINE Alu 2 147 0 8 653 213 121 0 0 chr13 8997126 8997159 -111287153 + (A)n Simple_repeat Simple_repeat 1 33 0 8 653 207 321 0 13 chr13 8997542 8997621 -111286691 - MIR SINE MIR -21 241 164 8 653 30 45 0 0 chr13 8997664 8997708 -111286604 + AT_rich Low_complexity Low_complexity 1 44 0 8 653 236 280 79 10 chr13 8997839 8997940 -111286372 - L3 LINE CR1 -794 3695 3588 8 653 308 254 0 27 chr13 8998171 8998244 -111286068 - B1F SINE Alu 0 149 79 8 653 476 274 22 45 chr13 8998249 8998383 -111285929 - B1F SINE Alu -18 131 1 8 653 237 156 269 45 chr13 8998395 8998462 -111285850 - ID4_ SINE ID 0 83 2 8 653 705 145 97 0 chr13 8998636 8998760 -111285552 + B1_Mur3 SINE Alu 1 136 -13 8 653 196 149 43 0 chr13 8998773 8998820 -111285492 + GA-rich Low_complexity Low_complexity 1 49 0 8 653 234 0 0 0 chr13 8998889 8998915 -111285397 + (CGGG)n Simple_repeat Simple_repeat 3 28 0 8 653 667 182 16 0 chr13 8999248 8999369 -111284943 - B1_Mm SINE Alu -6 141 19 8 653 247 291 55 48 chr13 8999370 8999527 -111284785 + MIRb SINE MIR 39 206 -62 8 653 566 136 88 26 chr13 8999887 9000000 -111284312 - B1_Mus1 SINE Alu 0 148 29 8 653 355 325 114 0 chr13 9000044 9000158 -111284154 + LTR31 LTR ERV1 244 370 -249 1 653 1411 95 5 0 chr13 9000282 9000471 -111283841 - B2_Mm1a SINE B2 -3 190 1 2 653 333 146 18 0 chr13 9000582 9000637 -111283675 + B1_Mus2 SINE Alu 1 56 -91 3 653 1209 61 0 0 chr13 9000745 9000893 -111283419 + B1_Mus1 SINE Alu 1 148 0 4 653 228 35 0 0 chr13 9000893 9000922 -111283390 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 653 2428 67 35 0 chr13 9000940 9001255 -111283057 - ORR1A2 LTR MaLR 0 327 2 6 653 2059 114 9 0 chr13 9001753 9002069 -111282243 + ORR1A3 LTR MaLR 1 319 -7 7 653 555 163 22 89 chr13 9003248 9003383 -111280929 - B1_Mus1 SINE Alu -1 147 22 8 653 729 63 0 0 chr13 9003417 9003512 -111280800 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 9 653 656 257 7 0 chr13 9003512 9003652 -111280660 - B1_Mur1 SINE Alu -8 141 1 1 653 434 261 87 0 chr13 9003742 9003857 -111280455 - RSINE1 SINE B4 -33 132 8 1 653 345 47 0 0 chr13 9004460 9004503 -111279809 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 653 504 0 0 0 chr13 9004503 9004558 -111279754 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 653 214 333 66 9 chr13 9004562 9004668 -111279644 - MIRb SINE MIR -137 131 20 1 653 189 0 0 0 chr13 9005428 9005449 -111278863 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 653 701 206 83 54 chr13 9005451 9005656 -111278656 - B3 SINE B2 0 216 6 1 653 811 175 28 7 chr13 9005741 9005885 -111278427 - B1_Mus1 SINE Alu -1 147 1 1 653 1223 29 0 0 chr13 9006459 9006598 -111277714 + B1_Mus1 SINE Alu 2 140 -8 1 653 525 160 11 0 chr13 9006623 9006717 -111277595 + URR1B DNA MER1_type 131 225 0 1 653 254 236 36 0 chr13 9006754 9006809 -111277503 + L1MA4 LINE L1 4839 4895 -952 2 653 1166 82 0 0 chr13 9006811 9006958 -111277354 + B1_Mus2 SINE Alu 1 147 0 2 653 235 0 57 0 chr13 9006978 9007013 -111277299 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 2 653 2217 78 9 9 chr13 9007041 9007364 -111276948 + ORR1A4 LTR MaLR 1 323 -6 2 653 1230 288 82 55 chr13 9007370 9007900 -111276412 + L1MA4 LINE L1 4909 5528 -772 2 653 1022 52 196 19 chr13 9007900 9008058 -111276254 + B2_Mm2 SINE B2 1 186 -9 2 653 1230 267 83 53 chr13 9008058 9008394 -111275918 + L1MA4 LINE L1 5460 5861 -439 2 653 1241 86 16 44 chr13 9008397 9008580 -111275732 + B2_Mm2 SINE B2 1 178 -17 2 653 418 45 0 0 chr13 9008644 9008710 -111275602 + B2_Mm1a SINE B2 127 192 -1 2 653 255 312 62 27 chr13 9008710 9008822 -111275490 + L1MA4 LINE L1 5812 5927 -1546 2 653 285 98 0 0 chr13 9009086 9009127 -111275185 + (TGG)n Simple_repeat Simple_repeat 1 41 0 2 653 550 244 49 0 chr13 9009149 9009272 -111275040 + B3 SINE B2 2 130 -86 2 653 304 284 29 10 chr13 9009460 9009563 -111274749 + RMER15 LTR ERVL 406 510 -65 2 653 841 256 39 0 chr13 9010140 9010343 -111273969 + B3 SINE B2 6 216 0 3 653 427 220 246 0 chr13 9010498 9010616 -111273696 + ID_B1 SINE B4 2 148 -76 3 653 329 104 0 0 chr13 9010619 9010667 -111273645 - ORR1B2 LTR MaLR -8 359 312 3 653 24 53 0 0 chr13 9010681 9010719 -111273593 + AT_rich Low_complexity Low_complexity 1 38 0 3 653 189 107 0 0 chr13 9010746 9010774 -111273538 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 3 653 692 42 42 0 chr13 9010781 9010877 -111273435 - B2_Mm2 SINE B2 -43 152 53 3 653 1144 104 9 0 chr13 9011106 9011338 -111272974 + (GGA)n Simple_repeat Simple_repeat 1 233 0 3 653 263 200 0 0 chr13 9011427 9011477 -111272835 + ID_B1 SINE B4 154 203 -21 3 653 315 0 0 0 chr13 9011520 9011555 -111272757 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 653 300 53 0 0 chr13 9012475 9012513 -111271799 + (CAGA)n Simple_repeat Simple_repeat 1 38 0 3 653 271 299 130 0 chr13 9012517 9012594 -111271718 - B1F SINE Alu -62 87 1 3 653 249 329 0 0 chr13 9012961 9013034 -111271278 - MIR SINE MIR 0 262 190 4 653 284 259 10 127 chr13 9013089 9013217 -111271095 - MIRb SINE MIR -90 178 60 4 653 378 0 0 0 chr13 9014366 9014408 -111269904 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 653 820 183 32 32 chr13 9014410 9014596 -111269716 - B3 SINE B2 -29 187 2 4 653 450 332 64 39 chr13 9014655 9014937 -111269375 - B4A SINE B4 0 292 4 4 653 279 278 61 20 chr13 9015333 9015432 -111268880 + B1F SINE Alu 38 140 -9 4 653 1026 133 23 23 chr13 9015687 9015864 -111268448 - B2_Mm2 SINE B2 -18 177 1 4 653 753 124 36 58 chr13 9015908 9016045 -111268267 - B1_Mur3 SINE Alu -7 142 9 4 653 474 65 0 0 chr13 9016048 9016110 -111268202 + (TC)n Simple_repeat Simple_repeat 2 63 0 4 653 792 272 86 30 chr13 9017088 9017357 -111266955 - B4A SINE B4 -8 284 1 4 653 186 43 0 0 chr13 9018120 9018143 -111266169 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 5 653 648 219 0 59 chr13 9018328 9018464 -111265848 + B1_Mur2 SINE Alu 7 134 -15 5 653 206 190 0 23 chr13 9018464 9018507 -111265805 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 5 653 656 218 99 94 chr13 9018560 9018783 -111265529 - ID_B1 SINE B4 0 224 1 5 653 225 0 0 0 chr13 9019049 9019074 -111265238 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 653 261 0 0 0 chr13 9019074 9019102 -111265210 + (GA)n Simple_repeat Simple_repeat 1 29 0 5 653 833 257 61 205 chr13 9019542 9020052 -111264260 + RLTR18 LTR ERVK 1 487 -129 5 653 1176 64 0 0 chr13 9020052 9020193 -111264119 + B1_Mm SINE Alu 1 141 -6 5 653 225 0 0 0 chr13 9020195 9020220 -111264092 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 5 653 833 257 61 205 chr13 9020220 9020424 -111263888 + RLTR18 LTR ERVK 488 615 -1 5 653 1572 46 0 15 chr13 9021171 9021369 -111262943 + B2_Mm2 SINE B2 1 195 0 5 653 438 36 0 0 chr13 9022100 9022156 -111262156 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 653 548 265 7 0 chr13 9022533 9022669 -111261643 + B1_Mur3 SINE Alu 1 137 -12 6 653 819 284 66 24 chr13 9023423 9023712 -111260600 + MLT1D LTR MaLR 202 502 -3 6 653 205 284 68 0 chr13 9023713 9023787 -111260525 + MIR SINE MIR 156 234 -28 6 653 1365 84 16 21 chr13 9023927 9024121 -111260191 + B2_Mm2 SINE B2 2 194 -1 6 653 305 191 32 0 chr13 9024133 9024196 -111260116 - HAL1-3A_ME LINE L1 -818 2040 1976 6 653 314 173 0 13 chr13 9024197 9024273 -111260039 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 653 337 333 0 0 chr13 9024392 9024470 -111259842 + RSINE1 SINE B4 79 156 -9 6 653 1337 83 33 0 chr13 9024546 9024726 -111259586 + B2_Mm1t SINE B2 2 187 -6 6 653 6474 100 22 85 chr13 9027032 9028680 -111255632 + L1VL4 LINE L1 1 1653 -1906 6 653 826 101 8 0 chr13 9028680 9028809 -111255503 - B1_Mm SINE Alu 0 147 18 7 653 6474 100 22 85 chr13 9028809 9028970 -111255342 + L1VL4 LINE L1 1654 1816 -1743 6 653 7357 111 13 3 chr13 9028961 9030371 -111253941 + Lx2 LINE L1 5223 6645 -352 7 653 1202 90 26 36 chr13 9030369 9030411 -111253901 + Lx2 LINE L1 6775 6816 -181 7 653 3264 39 37 0 chr13 9030411 9030793 -111253519 + MTA_Mm LTR MaLR 1 396 0 7 653 1202 90 26 36 chr13 9030793 9030945 -111253367 + Lx2 LINE L1 6817 6967 -30 7 653 1243 21 14 0 chr13 9030971 9031116 -111253196 - B1_Mm SINE Alu 0 147 1 7 653 189 0 0 0 chr13 9031542 9031563 -111252749 + (T)n Simple_repeat Simple_repeat 1 21 0 7 653 421 62 0 0 chr13 9031909 9031994 -111252318 - L1Md_F2 LINE L1 0 6582 6519 7 653 321 85 0 0 chr13 9031994 9032019 -111252293 + (T)n Simple_repeat Simple_repeat 1 25 0 7 653 295 271 58 17 chr13 9032037 9032157 -111252155 - ORR1D2 LTR MaLR -231 139 15 7 653 563 197 0 12 chr13 9032339 9032588 -111251724 + CT-rich Low_complexity Low_complexity 1 245 0 7 653 188 67 0 32 chr13 9032591 9032622 -111251690 + (CCCCCT)n Simple_repeat Simple_repeat 3 32 0 7 653 764 196 7 7 chr13 9032629 9032773 -111251539 - B1_Mur3 SINE Alu -5 144 1 8 653 191 36 36 0 chr13 9032822 9032850 -111251462 + (TTG)n Simple_repeat Simple_repeat 2 30 0 8 653 234 0 0 0 chr13 9032863 9032889 -111251423 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8 653 1131 69 0 14 chr13 9032889 9033026 -111251286 - B1_Mus1 SINE Alu -10 138 2 8 653 575 299 6 13 chr13 9033042 9033201 -111251111 - B3A SINE B2 -38 160 3 8 653 293 0 27 0 chr13 9033209 9033246 -111251066 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 8 653 310 118 24 84 chr13 9033246 9033318 -111250994 - RLTR25B LTR ERVK -521 507 441 8 653 752 49 0 10 chr13 9033253 9033357 -111250955 - B1_Mm SINE Alu -43 104 2 8 653 338 301 137 85 chr13 9033980 9034020 -111250292 + B4A SINE B4 57 85 -207 8 653 840 149 7 22 chr13 9034020 9034157 -111250155 + B1_Mur3 SINE Alu 1 135 -14 8 653 801 22 14 49 chr13 9034158 9034301 -111250011 + (GGGAGA)n Simple_repeat Simple_repeat 3 140 0 9 653 338 301 137 85 chr13 9034301 9034469 -111249843 + B4A SINE B4 86 278 -14 8 653 540 214 404 14 chr13 9035046 9035269 -111249043 + MTD LTR MaLR 20 329 -90 9 653 272 160 20 0 chr13 9035267 9035317 -111248995 + MTD LTR MaLR 303 353 -6 9 653 227 284 0 108 chr13 9035490 9035573 -111248739 + MTEa LTR MaLR 8 81 -298 9 653 324 208 19 68 chr13 9035678 9035781 -111248531 + MTEa LTR MaLR 265 362 -17 9 653 520 271 121 50 chr13 9035781 9035977 -111248335 - MLT1-int LTR MaLR -765 606 404 9 653 366 319 8 0 chr13 9035977 9036096 -111248216 + PB1D9 SINE Alu 1 120 0 9 653 609 267 65 62 chr13 9036096 9036251 -111248061 - MLT1-int LTR MaLR -968 403 125 9 653 1093 150 79 88 chr13 9036251 9036478 -111247834 + URR1A DNA MER1_type 1 225 -1 9 653 609 263 10 73 chr13 9036478 9036604 -111247708 - MLT1-int LTR MaLR -1247 124 1 9 653 25 0 0 0 chr13 9036638 9036663 -111247649 + AT_rich Low_complexity Low_complexity 1 25 0 9 653 645 256 72 29 chr13 9036791 9037000 -111247312 - RMER15 LTR ERVL -18 557 340 9 653 329 227 51 68 chr13 9037025 9037143 -111247169 - RMER15 LTR ERVL -423 152 37 9 653 273 322 142 9 chr13 9037223 9037442 -111246870 - MLT2B4 LTR ERVL -296 260 13 9 653 1398 75 32 0 chr13 9037606 9037792 -111246520 + B2_Mm1t SINE B2 1 192 -1 9 653 987 203 125 104 chr13 9038802 9039187 -111245125 - RLTR9C LTR ERVK 0 393 1 1 653 261 297 0 0 chr13 9039890 9039977 -111244335 + GA-rich Low_complexity Low_complexity 1 87 0 1 653 870 295 98 40 chr13 9040607 9040953 -111243359 - MTEa LTR MaLR -13 366 1 1 653 21 0 0 0 chr13 9041412 9041433 -111242879 + AT_rich Low_complexity Low_complexity 1 21 0 1 653 207 0 0 0 chr13 9041467 9041490 -111242822 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 1 653 1254 268 43 61 chr13 9041505 9041966 -111242346 - MER31A LTR ERV1 -30 455 3 1 653 409 331 0 33 chr13 9042417 9042567 -111241745 - RSINE1 SINE B4 -19 146 2 1 653 180 348 86 14 chr13 9043288 9043428 -111240884 - L3 LINE CR1 -131 4358 4209 1 653 313 256 12 0 chr13 9043797 9043879 -111240433 + RSINE1 SINE B4 11 93 -72 1 653 441 0 0 0 chr13 9043894 9043943 -111240369 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 81 306 0 0 0 chr13 9043943 9043976 -111240336 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 654 227 384 50 12 chr13 9044175 9044330 -111239982 + MTEb LTR MaLR 6 166 -204 1 654 998 197 131 135 chr13 9044330 9044759 -111239553 - MT2A LTR ERVL 0 533 107 1 654 33259 69 11 0 chr13 9044760 9049780 -111234532 + L1Md_F2 LINE L1 511 5586 -297 1 654 7803 72 0 4 chr13 9049780 9050774 -111233538 + L1Md_F2 LINE L1 5587 6576 -6 1 654 1174 68 7 0 chr13 9050779 9050925 -111233387 + B1_Mus1 SINE Alu 2 148 0 1 654 243 0 0 0 chr13 9050936 9050963 -111233349 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 654 272 373 70 0 chr13 9050978 9050993 -111233319 - MTE2b LTR MaLR -227 152 1 1 654 567 236 16 0 chr13 9050993 9051120 -111233192 - MT2A LTR ERVL -404 129 1 1 654 273 306 61 10 chr13 9051198 9051297 -111233015 + MTEb LTR MaLR 268 371 -8 1 654 1847 31 257 4 chr13 9051307 9051564 -111232748 - RLTRETN_Mm LTR ERVK 0 322 1 1 654 201 147 0 0 chr13 9051574 9051608 -111232704 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1 654 784 159 150 28 chr13 9051627 9051840 -111232472 + RMER4B LTR ERVK 17 255 -330 1 654 380 234 99 53 chr13 9052245 9052416 -111231896 + RMER4B LTR ERVK 270 448 -137 1 654 249 344 42 30 chr13 9052612 9052745 -111231567 - L3 LINE CR1 -373 4116 3982 1 654 1706 21 0 0 chr13 9052745 9052933 -111231379 + B2_Mm1t SINE B2 2 189 -4 1 654 249 344 42 30 chr13 9052933 9052964 -111231348 - L3 LINE CR1 -508 3981 3950 1 654 940 93 260 0 chr13 9053618 9053768 -111230544 + B2_Mm2 SINE B2 2 190 -5 1 654 836 0 0 18 chr13 9053817 9053926 -111230386 - BC1_Mm scRNA scRNA -45 107 1 1 654 182 382 0 13 chr13 9053987 9054064 -111230248 - L3 LINE CR1 -2 4487 4412 1 654 1843 91 45 7 chr13 9055320 9055608 -111228704 - ORR1A2 LTR MaLR 0 327 29 1 654 3558 15 5 0 chr13 9055874 9056268 -111228044 + MTA_Mm LTR MaLR 1 396 0 1 654 820 275 73 7 chr13 9057103 9057378 -111226934 - MER2 DNA MER2_type -51 294 2 1 654 222 328 43 26 chr13 9057571 9057687 -111226625 - MER5A DNA MER1_type -22 167 50 1 654 300 62 20 12 chr13 9058213 9058274 -111226038 + B1_Mus2 SINE Alu 89 147 0 1 654 303 145 0 0 chr13 9058276 9058345 -111225967 + (A)n Simple_repeat Simple_repeat 1 69 0 1 654 381 328 61 0 chr13 9058462 9058642 -111225670 + L1MCa LINE L1 11 201 -6307 1 654 246 281 0 0 chr13 9058642 9058699 -111225613 + GA-rich Low_complexity Low_complexity 4 60 0 1 654 415 298 37 0 chr13 9058815 9058976 -111225336 + L1MCa LINE L1 2035 2201 -4307 1 654 679 335 24 24 chr13 9059076 9059364 -111224948 + B4A SINE B4 1 288 -4 1 654 279 0 0 0 chr13 9059381 9059412 -111224900 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 654 780 176 117 46 chr13 9060518 9060715 -111223597 - ID_B1 SINE B4 0 224 14 1 654 1167 75 0 0 chr13 9061657 9061804 -111222508 - B1_Mus2 SINE Alu 0 147 1 1 654 388 292 8 8 chr13 9061966 9062087 -111222225 + L1M5 LINE L1 5611 5731 -393 1 654 518 248 0 0 chr13 9062423 9062524 -111221788 + PB1D10 SINE Alu 1 101 -16 1 654 293 333 0 0 chr13 9062626 9062701 -111221611 + PB1D10 SINE Alu 27 101 -16 1 654 228 86 0 0 chr13 9063869 9063904 -111220408 + (TC)n Simple_repeat Simple_repeat 1 35 0 1 654 524 171 9 0 chr13 9063910 9064021 -111220291 + (TA)n Simple_repeat Simple_repeat 2 113 0 1 654 198 71 0 0 chr13 9064228 9064256 -111220056 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 1 654 799 273 5 10 chr13 9064283 9064483 -111219829 + B4 SINE B4 5 203 -89 1 654 2892 69 0 0 chr13 9065832 9066225 -111218087 - MTB LTR MaLR -7 393 1 1 654 202 331 38 8 chr13 9066347 9066482 -111217830 - MIRb SINE MIR -61 207 67 1 654 756 276 84 51 chr13 9066632 9066679 -111217633 - B4 SINE B4 0 292 249 1 654 378 0 0 0 chr13 9066679 9066721 -111217591 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 654 756 276 84 51 chr13 9066721 9066948 -111217364 - B4 SINE B4 -44 248 9 1 654 207 0 0 0 chr13 9067451 9067474 -111216838 + (T)n Simple_repeat Simple_repeat 1 23 0 1 654 1167 295 33 13 chr13 9067824 9068216 -111216096 - MER31A LTR ERV1 -75 410 11 1 654 2747 173 92 14 chr13 9068648 9069147 -111215165 + Lx5 LINE L1 6495 7032 -18 1 654 234 0 0 0 chr13 9069147 9069173 -111215139 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1 654 464 291 201 10 chr13 9069289 9069483 -111214829 + B4 SINE B4 6 236 -56 1 654 306 0 0 0 chr13 9069499 9069533 -111214779 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 654 435 151 0 0 chr13 9069541 9069634 -111214678 + GA-rich Low_complexity Low_complexity 1 93 0 1 654 1012 191 8 3 chr13 9069706 9070038 -111214274 + MTC LTR MaLR 1 413 -8 1 654 242 299 95 28 chr13 9070141 9070320 -111213992 + L2c LINE L2 2411 2601 -818 1 654 21 0 0 0 chr13 9070599 9070620 -111213692 + GC_rich Low_complexity Low_complexity 1 21 0 1 654 186 302 32 0 chr13 9070847 9070910 -111213402 + L2c LINE L2 3019 3083 -304 1 654 189 121 0 0 chr13 9071329 9071362 -111212950 + (T)n Simple_repeat Simple_repeat 1 33 0 1 654 267 208 0 19 chr13 9071364 9071418 -111212894 - PB1D10 SINE Alu -31 86 34 1 654 985 259 10 3 chr13 9072615 9072857 -111211455 + ID_B1 SINE B4 7 253 -39 1 654 762 268 130 22 chr13 9073577 9073939 -111210373 + L1MD1 LINE L1 3485 3885 -2261 1 654 209 227 0 0 chr13 9074013 9074057 -111210255 + A-rich Low_complexity Low_complexity 1 44 0 1 654 1154 81 57 6 chr13 9074139 9074314 -111209998 + B2_Mm2 SINE B2 6 189 -6 1 654 389 236 38 10 chr13 9074407 9074522 -111209790 + L1MD1 LINE L1 4065 4186 -1954 1 654 227 147 0 0 chr13 9074529 9074563 -111209749 + B1_Mur1 SINE Alu 84 117 -32 1 654 411 237 28 83 chr13 9074593 9074834 -111209478 + L1MD1 LINE L1 5206 5436 -806 1 654 256 293 0 74 chr13 9074880 9074961 -111209351 + ID4 SINE ID 9 83 0 1 654 1656 256 81 92 chr13 9074965 9075442 -111208870 + L1MD1 LINE L1 5463 5908 -334 1 654 4464 118 60 14 chr13 9075442 9076171 -111208141 + Lx4B LINE L1 6292 7054 -4 1 654 1656 256 81 92 chr13 9076171 9076480 -111207832 + L1MD1 LINE L1 5909 6241 -1 1 654 321 219 31 20 chr13 9077392 9077490 -111206822 + (CA)n Simple_repeat Simple_repeat 2 100 0 1 654 265 287 90 113 chr13 9077688 9078173 -111206139 + MLT2C2 LTR ERVL 1 541 -14 1 654 740 271 87 15 chr13 9078298 9078564 -111205748 + B4A SINE B4 2 286 -6 1 654 432 0 0 0 chr13 9078573 9078621 -111205691 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 654 238 250 157 29 chr13 9078647 9078717 -111205595 + PB1D10 SINE Alu 7 85 -32 1 654 639 344 98 44 chr13 9079128 9079583 -111204729 + Lx9 LINE L1 6845 7462 -182 1 654 282 116 0 0 chr13 9079583 9079626 -111204686 + (TATG)n Simple_repeat Simple_repeat 1 43 0 1 654 315 354 145 47 chr13 9079626 9079742 -111204570 + Lx9 LINE L1 7335 7472 -1 1 654 920 86 14 0 chr13 9079757 9079896 -111204416 - ORR1A3 LTR MaLR -8 318 178 1 654 464 132 0 0 chr13 9079895 9079971 -111204341 - ORR1A3 LTR MaLR -251 76 1 1 654 633 272 68 24 chr13 9080165 9080372 -111203940 - B3 SINE B2 0 216 1 1 654 271 183 0 40 chr13 9080753 9080827 -111203485 + GA-rich Low_complexity Low_complexity 3 73 0 1 654 321 238 0 56 chr13 9081463 9081570 -111202742 - PB1D10 SINE Alu -1 116 16 1 654 21 71 0 0 chr13 9081764 9081806 -111202506 + AT_rich Low_complexity Low_complexity 1 42 0 1 654 1129 315 97 10 chr13 9082355 9082858 -111201454 - Lx8 LINE L1 -17 7456 6910 1 654 323 208 0 40 chr13 9083054 9083129 -111201183 + ID4 SINE ID 2 73 -10 1 654 4031 140 109 16 chr13 9083157 9083947 -111200365 + RMER19B LTR ERVK 1 863 -39 1 654 679 185 37 0 chr13 9083956 9084091 -111200221 + ID_B1 SINE B4 80 219 -5 1 654 720 253 0 25 chr13 9084224 9084386 -111199926 + RSINE1 SINE B4 6 163 -2 1 654 230 303 47 78 chr13 9084386 9084417 -111199895 + B2_Mm2 SINE B2 5 191 -4 1 654 435 52 0 0 chr13 9084861 9084919 -111199393 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 654 1361 89 26 0 chr13 9085058 9085248 -111199064 - B2_Mm2 SINE B2 0 195 1 1 654 1145 241 62 79 chr13 9085524 9085554 -111198758 + ORR1D2 LTR MaLR 7 33 -337 1 654 2533 71 6 0 chr13 9085554 9085879 -111198433 + ORR1A2 LTR MaLR 1 327 0 1 654 1145 241 62 79 chr13 9085879 9086204 -111198108 + ORR1D2 LTR MaLR 34 356 -14 1 654 3340 90 166 0 chr13 9086321 9086822 -111197490 - MT2B2 LTR ERVL 0 584 1 1 654 463 325 81 33 chr13 9086951 9087285 -111197027 + ORR1E LTR MaLR 8 357 -2 1 654 544 247 143 83 chr13 9087522 9087787 -111196525 + B4A SINE B4 1 281 -11 1 654 321 26 0 0 chr13 9087831 9087869 -111196443 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 654 486 0 0 0 chr13 9087869 9087922 -111196390 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 654 320 264 182 41 chr13 9088469 9088738 -111195574 - L1MC4 LINE L1 -648 7394 7088 1 654 570 15 0 0 chr13 9088762 9088829 -111195483 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 654 304 313 35 56 chr13 9089334 9089476 -111194836 - B1F SINE Alu -8 141 3 1 654 3623 261 121 25 chr13 9089487 9090486 -111193826 + Lx8 LINE L1 6133 7199 -274 1 654 198 0 0 0 chr13 9090486 9090508 -111193804 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1 654 3623 261 121 25 chr13 9090508 9090583 -111193729 + Lx8 LINE L1 7200 7309 -164 1 654 356 299 10 10 chr13 9090681 9090779 -111193533 + RSINE1 SINE B4 11 108 -57 1 654 366 23 0 0 chr13 9090808 9090851 -111193461 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 654 181 130 65 0 chr13 9091299 9091345 -111192967 + CT-rich Low_complexity Low_complexity 1 49 0 2 654 285 247 33 0 chr13 9091346 9091420 -111192892 - ID4_ SINE ID -68 84 8 2 654 264 305 28 19 chr13 9092133 9092240 -111192072 + RSINE1 SINE B4 2 109 -56 2 654 324 0 0 0 chr13 9092332 9092368 -111191944 + (GTATG)n Simple_repeat Simple_repeat 3 38 0 2 654 303 113 0 0 chr13 9092858 9092911 -111191401 + (CGGGG)n Simple_repeat Simple_repeat 1 53 0 2 654 21 0 0 0 chr13 9093103 9093124 -111191188 + GC_rich Low_complexity Low_complexity 1 21 0 2 654 27 29 0 0 chr13 9093386 9093420 -111190892 + GC_rich Low_complexity Low_complexity 1 34 0 2 654 230 256 0 62 chr13 9093527 9093656 -111190656 + (CGGGG)n Simple_repeat Simple_repeat 2 122 0 2 654 23 78 0 0 chr13 9093875 9093926 -111190386 + GC_rich Low_complexity Low_complexity 1 51 0 2 654 452 123 231 19 chr13 9094998 9095106 -111189206 + B1_Mus2 SINE Alu 17 147 0 2 654 36 0 0 0 chr13 9096375 9096411 -111187901 + AT_rich Low_complexity Low_complexity 1 36 0 2 654 501 252 26 0 chr13 9096655 9096770 -111187542 + RSINE1 SINE B4 17 134 -31 2 654 21 0 0 0 chr13 9098058 9098079 -111186233 + AT_rich Low_complexity Low_complexity 1 21 0 2 654 234 306 19 64 chr13 9098764 9098921 -111185391 - L2 LINE L2 -467 2952 2803 2 654 518 292 13 19 chr13 9098931 9099088 -111185224 + RSINE1 SINE B4 2 157 -8 2 654 1399 69 16 21 chr13 9100674 9100867 -111183445 - B2_Mm2 SINE B2 -2 193 2 2 654 190 338 41 27 chr13 9101073 9101146 -111183166 - MIR SINE MIR -84 124 51 2 654 27 49 0 0 chr13 9101339 9101380 -111182932 + AT_rich Low_complexity Low_complexity 1 41 0 2 654 479 295 30 97 chr13 9101402 9101567 -111182745 - B3A SINE B2 -43 155 2 2 654 736 51 0 0 chr13 9101812 9101910 -111182402 + B1_Mus2 SINE Alu 41 138 -9 2 654 275 65 22 0 chr13 9101910 9101956 -111182356 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 654 778 244 25 6 chr13 9102290 9102451 -111181861 - B3A SINE B2 -30 168 5 2 654 428 199 1 75 chr13 9102834 9102962 -111181350 - PB1D9 SINE Alu 0 120 2 2 654 1178 48 14 0 chr13 9103954 9104099 -111180213 - B1_Mm SINE Alu 0 147 1 2 654 25 0 0 0 chr13 9104671 9104696 -111179616 + AT_rich Low_complexity Low_complexity 1 25 0 2 654 214 269 154 0 chr13 9104939 9105017 -111179295 - L2b LINE L2 0 3375 3286 2 654 239 183 33 16 chr13 9105849 9105904 -111178408 + L1MA6 LINE L1 6123 6178 -122 2 654 1256 127 0 6 chr13 9105904 9106086 -111178226 + B2_Mm2 SINE B2 1 181 -14 2 654 712 201 207 0 chr13 9106158 9106327 -111177985 + B3 SINE B2 7 210 -6 2 654 295 284 156 16 chr13 9106345 9106531 -111177781 + B4 SINE B4 81 292 0 2 654 666 0 0 0 chr13 9106876 9106950 -111177362 + (GGCTG)n Simple_repeat Simple_repeat 1 74 0 2 654 557 211 247 0 chr13 9107149 9107315 -111176997 - B3 SINE B2 -7 209 3 2 654 294 29 0 0 chr13 9107487 9107522 -111176790 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 654 218 324 58 10 chr13 9107873 9107976 -111176336 - PB1 SINE Alu -19 108 1 2 654 594 301 72 0 chr13 9108571 9108764 -111175548 + 7SK RNA RNA 32 238 -93 2 654 233 134 132 12 chr13 9109073 9109156 -111175156 - Lx2B LINE L1 -1 6999 6907 2 654 1342 92 11 11 chr13 9109194 9109381 -111174931 + B2_Mm1t SINE B2 2 188 -5 2 654 369 270 70 0 chr13 9109713 9109813 -111174499 - PB1D10 SINE Alu 0 117 11 2 654 22 0 0 0 chr13 9110047 9110069 -111174243 + AT_rich Low_complexity Low_complexity 1 22 0 2 654 1224 83 32 37 chr13 9110401 9110588 -111173724 - B2_Mm1t SINE B2 -6 187 2 2 654 207 191 0 0 chr13 9110929 9110976 -111173336 + T-rich Low_complexity Low_complexity 4 50 0 2 654 381 155 24 12 chr13 9111035 9111120 -111173192 - RMER10A LTR ERVL -13 429 344 2 654 1983 106 26 0 chr13 9111149 9111460 -111172852 - ORR1A2 LTR MaLR -8 319 1 2 654 293 118 20 0 chr13 9112261 9112312 -111172000 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 654 362 271 53 83 chr13 9112797 9112819 -111171493 - RSINE1 SINE B4 0 165 146 2 654 195 100 0 0 chr13 9112819 9112849 -111171463 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 654 362 271 53 83 chr13 9112849 9112995 -111171317 - RSINE1 SINE B4 -20 145 2 2 654 246 32 0 0 chr13 9113438 9113469 -111170843 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 654 1287 27 0 0 chr13 9113603 9113750 -111170562 + B1_Mm SINE Alu 1 147 0 2 654 403 196 101 18 chr13 9114039 9114148 -111170164 - MTEa LTR MaLR 0 379 262 2 654 1348 71 27 6 chr13 9114366 9114549 -111169763 - B2_Mm2 SINE B2 -7 188 2 2 654 488 301 29 41 chr13 9114937 9115107 -111169205 - ID_B1 SINE B4 0 224 57 2 654 365 277 395 0 chr13 9115214 9115417 -111168895 - B4A SINE B4 -6 286 4 2 654 307 128 85 7 chr13 9116376 9116444 -111167868 - Lx2B LINE L1 -6 6994 6933 2 654 680 284 25 25 chr13 9116494 9116582 -111167730 + B4A SINE B4 2 89 -203 2 654 224 288 8 92 chr13 9116582 9116712 -111167600 + PB1D9 SINE Alu 1 119 -1 2 654 405 212 0 12 chr13 9116876 9116957 -111167355 + ID4_ SINE ID 2 81 -2 2 654 374 264 26 43 chr13 9116959 9117074 -111167238 + ID_B1 SINE B4 86 198 -26 2 654 1394 306 119 47 chr13 9117127 9117974 -111166338 - Lx8 LINE L1 -373 7100 6193 2 654 224 250 0 0 chr13 9118045 9118097 -111166215 + T-rich Low_complexity Low_complexity 1 52 0 2 654 633 240 7 7 chr13 9118099 9118246 -111166066 - B1_Mur3 SINE Alu -1 148 2 2 654 511 227 27 102 chr13 9118360 9118507 -111165805 - B1_Mur1 SINE Alu -1 148 13 2 654 443 232 159 12 chr13 9118886 9119056 -111165256 + Lx7 LINE L1 5640 5834 -1862 2 654 455 245 137 0 chr13 9119725 9119827 -111164485 - B1_Mur1 SINE Alu -28 121 6 2 654 1006 271 139 36 chr13 9120188 9120740 -111163572 - L1MA7 LINE L1 -348 5964 5348 2 654 585 28 0 0 chr13 9120740 9120811 -111163501 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 654 1003 281 132 53 chr13 9120811 9120917 -111163395 - L1MA7 LINE L1 -965 5347 5254 2 654 431 250 27 0 chr13 9121160 9121272 -111163040 + B1F SINE Alu 2 116 -33 2 654 451 302 14 21 chr13 9122156 9122298 -111162014 + RSINE1 SINE B4 21 161 -4 2 654 929 209 61 10 chr13 9122351 9122549 -111161763 + B3 SINE B2 2 209 -7 2 654 587 241 124 22 chr13 9122650 9122828 -111161484 + B3A SINE B2 2 197 -1 2 654 223 336 114 8 chr13 9123509 9123632 -111160680 + ID_B1 SINE B4 3 138 -86 2 654 597 246 32 0 chr13 9123891 9124017 -111160295 - RSINE1 SINE B4 -33 132 3 2 654 307 395 0 26 chr13 9124208 9124325 -111159987 - PB1D10 SINE Alu 0 117 4 2 654 211 303 12 50 chr13 9124425 9124505 -111159807 - PB1D10 SINE Alu -5 112 36 2 654 363 44 0 0 chr13 9125239 9125284 -111159028 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 654 450 255 9 18 chr13 9125294 9125406 -111158906 - RSINE1 SINE B4 -41 124 14 2 654 228 309 15 0 chr13 9125477 9125545 -111158767 + ID4_ SINE ID 5 73 -10 2 654 4294 57 29 5 chr13 9126053 9126604 -111157708 - L1Md_F2 LINE L1 -2 6580 6017 2 654 239 254 36 0 chr13 9131044 9131099 -111153213 - MER2B DNA MER2_type -3 333 277 2 654 297 288 0 29 chr13 9131207 9131275 -111153037 - MER2B DNA MER2_type -268 68 3 2 654 438 176 0 0 chr13 9131749 9131834 -111152478 + (CATA)n Simple_repeat Simple_repeat 2 86 0 2 654 1037 62 0 33 chr13 9131834 9131985 -111152327 - B2_Mm2 SINE B2 -45 150 5 2 654 683 230 38 132 chr13 9132834 9133069 -111151243 - B3 SINE B2 -3 213 1 2 654 191 412 22 45 chr13 9133154 9133243 -111151069 - L2b LINE L2 -15 3360 3274 2 654 1237 34 0 0 chr13 9134318 9134464 -111149848 + B1_Mm SINE Alu 2 147 0 2 654 231 188 0 0 chr13 9134464 9134512 -111149800 + A-rich Low_complexity Low_complexity 1 48 0 2 654 204 118 29 0 chr13 9134647 9134681 -111149631 + (TCTA)n Simple_repeat Simple_repeat 2 36 0 2 654 197 291 0 18 chr13 9134958 9135014 -111149298 - MIRb SINE MIR -7 261 207 2 654 342 152 0 0 chr13 9135027 9135086 -111149226 + (CTA)n Simple_repeat Simple_repeat 3 61 0 2 654 336 259 179 54 chr13 9138343 9138527 -111145785 - Lx8 LINE L1 -250 7223 7017 2 654 422 290 233 4 chr13 9138730 9138983 -111145329 + L1MCa LINE L1 195 505 -6003 2 654 319 211 184 16 chr13 9139043 9139168 -111145144 - L1MC3 LINE L1 -205 7580 7435 2 654 772 61 254 0 chr13 9139380 9139494 -111144818 - B1_Mus1 SINE Alu -4 144 2 2 654 943 139 24 105 chr13 9140184 9140393 -111143919 - B2_Mm2 SINE B2 -3 192 1 2 654 1079 103 7 0 chr13 9140584 9140730 -111143582 + B1_Mm SINE Alu 1 147 0 2 654 654 274 70 88 chr13 9140968 9141240 -111143072 - B4 SINE B4 -24 268 2 2 654 183 42 0 0 chr13 9144244 9144268 -111140044 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 2 654 575 215 33 40 chr13 9144278 9144428 -111139884 - B1_Mur3 SINE Alu 0 149 1 2 654 330 336 51 29 chr13 9145914 9146052 -111138260 - RSINE1 SINE B4 -21 144 4 2 654 21 0 0 0 chr13 9146962 9146983 -111137329 + AT_rich Low_complexity Low_complexity 1 21 0 2 654 509 244 8 25 chr13 9147186 9147304 -111137008 - PB1D10 SINE Alu 0 117 2 2 654 548 262 52 11 chr13 9147331 9147505 -111136807 - RMER30 DNA MER1_type -1 201 21 2 654 188 238 0 16 chr13 9148604 9148668 -111135644 + CT-rich Low_complexity Low_complexity 1 63 0 3 654 476 297 89 13 chr13 9148685 9148842 -111135470 - ID_B1 SINE B4 -23 201 33 3 654 752 145 16 0 chr13 9151768 9151892 -111132420 + B3 SINE B2 2 127 -89 3 654 363 306 53 6 chr13 9152139 9152310 -111132002 + L1M2 LINE L1 5102 5280 -863 3 654 613 300 30 15 chr13 9152316 9152583 -111131729 + L1M2 LINE L1 5501 5771 -520 3 654 651 26 0 0 chr13 9152975 9153052 -111131260 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 654 186 43 0 0 chr13 9153675 9153698 -111130614 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 654 742 164 44 15 chr13 9153698 9153834 -111130478 - B1_Mus1 SINE Alu -3 145 6 3 654 330 273 243 41 chr13 9154214 9154404 -111129908 - L1_Rod LINE L1 -172 5675 5439 3 654 1796 68 8 4 chr13 9154404 9154640 -111129672 - L1_Mus1 LINE L1 0 6567 6331 3 654 330 273 243 41 chr13 9154640 9154885 -111129427 - L1_Rod LINE L1 -409 5438 5152 3 654 229 195 0 0 chr13 9155247 9155288 -111129024 + (ATGGTG)n Simple_repeat Simple_repeat 4 44 0 3 654 348 245 9 97 chr13 9155313 9155426 -111128886 - RSINE1 SINE B4 -61 104 2 3 654 1909 72 26 36 chr13 9155503 9155808 -111128504 - IAPLTR3 LTR ERVK -24 302 1 3 654 601 32 54 31 chr13 9155814 9155943 -111128369 + (CA)n Simple_repeat Simple_repeat 1 132 0 3 654 408 159 0 0 chr13 9155962 9156025 -111128287 - PB1D9 SINE Alu -56 64 2 3 654 273 179 0 130 chr13 9156025 9156039 -111128273 - MT2B LTR ERVL -380 221 155 3 654 202 116 0 65 chr13 9156316 9156362 -111127950 + T-rich Low_complexity Low_complexity 3 45 0 3 654 611 196 14 36 chr13 9156367 9156505 -111127807 - B1_Mur3 SINE Alu -1 148 14 3 654 26 88 0 0 chr13 9156541 9156609 -111127703 + AT_rich Low_complexity Low_complexity 1 68 0 3 654 207 0 0 0 chr13 9156787 9156810 -111127502 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 3 654 1160 49 0 27 chr13 9156816 9156962 -111127350 - B1_Mus2 SINE Alu -5 142 1 3 654 208 139 0 0 chr13 9158212 9158248 -111126064 + (T)n Simple_repeat Simple_repeat 1 36 0 3 654 255 269 51 0 chr13 9158444 9158522 -111125790 + ID4_ SINE ID 2 83 0 3 654 270 303 33 11 chr13 9159109 9159199 -111125113 - Tigger1 DNA MER2_type -1 2417 2326 3 654 244 319 114 16 chr13 9159320 9159565 -111124747 - Tigger1 DNA MER2_type -472 1946 1678 3 654 399 318 83 59 chr13 9159704 9159908 -111124404 - B4 SINE B4 -4 288 80 3 654 575 262 198 4 chr13 9159961 9160199 -111124113 - B4A SINE B4 -8 284 1 3 654 278 222 32 53 chr13 9160202 9160297 -111124015 - B4A SINE B4 -199 93 1 3 654 551 293 53 61 chr13 9160297 9160542 -111123770 - Tigger1 DNA MER2_type -937 1481 1239 3 654 1039 286 214 8 chr13 9160543 9161405 -111122907 - Tigger1 DNA MER2_type -1303 1115 76 3 654 349 315 0 51 chr13 9163630 9163747 -111120565 - PB1D10 SINE Alu -5 112 2 3 654 336 48 0 0 chr13 9163981 9164023 -111120289 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 654 635 293 77 7 chr13 9164103 9164323 -111119989 - B4A SINE B4 -58 234 1 3 654 588 261 167 8 chr13 9164740 9165003 -111119309 - Tigger7 DNA MER2_type -1951 540 236 3 654 471 63 0 0 chr13 9165125 9165188 -111119124 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 654 472 326 20 27 chr13 9165198 9165346 -111118966 - RSINE1 SINE B4 -15 150 4 3 654 724 189 0 59 chr13 9168460 9168595 -111115717 + B1_Mus1 SINE Alu 1 127 -21 3 654 437 298 32 0 chr13 9168838 9168962 -111115350 + B1_Mur1 SINE Alu 2 129 -20 3 654 239 284 161 0 chr13 9168989 9169070 -111115242 + B1_Mus1 SINE Alu 29 122 -26 3 654 276 149 0 0 chr13 9172334 9172381 -111111931 + (A)n Simple_repeat Simple_repeat 1 47 0 3 654 381 117 0 0 chr13 9173196 9173256 -111111056 + (A)n Simple_repeat Simple_repeat 1 60 0 3 654 321 98 20 0 chr13 9173844 9173895 -111110417 - B3A SINE B2 -144 54 3 3 654 413 178 250 17 chr13 9173935 9174055 -111110257 - B1_Mur2 SINE Alu -1 148 1 3 655 286 259 132 21 chr13 9176362 9176551 -111107761 - L1MD LINE L1 -3232 2914 2705 3 655 373 254 108 33 chr13 9176551 9176763 -111107549 - L1MD LINE L1 -3682 2464 2237 3 655 502 261 25 0 chr13 9176800 9176919 -111107393 - RSINE1 SINE B4 -40 125 4 3 655 197 33 0 32 chr13 9177103 9177134 -111107178 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 3 655 1801 205 68 23 chr13 9178377 9178772 -111105540 + MTC LTR MaLR 1 413 -8 3 655 784 252 127 34 chr13 9179565 9179857 -111104455 + ORR1E LTR MaLR 1 319 -40 3 655 587 335 16 16 chr13 9179822 9180016 -111104296 - MTEa LTR MaLR -175 204 11 3 655 204 189 38 0 chr13 9180894 9180947 -111103365 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 3 655 953 244 58 10 chr13 9180947 9181154 -111103158 - ID_B1 SINE B4 0 224 8 3 655 244 164 32 16 chr13 9181525 9181587 -111102725 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 3 655 672 122 147 9 chr13 9181850 9181966 -111102346 + B1_Mus2 SINE Alu 10 141 -6 3 655 198 0 0 0 chr13 9181967 9181989 -111102323 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 3 655 551 160 15 22 chr13 9182061 9182195 -111102117 + GA-rich Low_complexity Low_complexity 2 134 0 3 655 1454 84 0 5 chr13 9182195 9182387 -111101925 + B2_Mm2 SINE B2 1 191 -4 3 655 675 37 0 0 chr13 9182388 9182470 -111101842 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 3 655 923 198 235 0 chr13 9182515 9182753 -111101559 - Lx7 LINE L1 -364 7332 7039 3 655 1402 219 26 26 chr13 9182759 9183064 -111101248 - Lx7 LINE L1 -1020 6676 6372 3 655 1881 148 16 7 chr13 9183095 9183401 -111100911 - RLTR27 LTR ERVK 0 309 1 3 655 234 0 0 0 chr13 9183900 9183926 -111100386 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 655 303 280 40 4 chr13 9185240 9185347 -111098965 + B1F SINE Alu 10 115 -2 3 655 853 282 158 16 chr13 9185784 9185803 -111098509 - MTEa LTR MaLR -32 347 328 3 655 2637 132 15 12 chr13 9185803 9186209 -111098103 + MTB_Mm LTR MaLR 1 407 0 3 655 853 282 158 16 chr13 9186209 9186492 -111097820 - MTEa LTR MaLR -52 327 2 3 655 420 250 35 0 chr13 9187790 9187906 -111096406 - ID_B1 SINE B4 -11 213 94 3 655 341 298 88 41 chr13 9188074 9188221 -111096091 - HAL1-3A_ME LINE L1 -420 2438 2285 3 655 491 131 53 15 chr13 9188261 9188393 -111095919 + CT-rich Low_complexity Low_complexity 1 137 0 3 655 901 287 66 98 chr13 9188447 9188720 -111095592 - L1MB3 LINE L1 -101 6082 5818 3 655 682 246 113 81 chr13 9188720 9189003 -111095309 - B4A SINE B4 0 292 1 3 655 901 287 66 98 chr13 9189003 9189197 -111095115 - L1MB3 LINE L1 -366 5817 5630 3 655 324 169 0 0 chr13 9189695 9189772 -111094540 + GA-rich Low_complexity Low_complexity 2 78 0 3 655 666 183 0 0 chr13 9189793 9189962 -111094350 + GA-rich Low_complexity Low_complexity 2 170 0 3 655 218 246 9 0 chr13 9189973 9190087 -111094225 + GA-rich Low_complexity Low_complexity 2 116 0 3 655 351 0 0 0 chr13 9190087 9190126 -111094186 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 655 360 0 0 0 chr13 9190126 9190165 -111094147 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 655 773 297 49 41 chr13 9191041 9191287 -111093025 - B4 SINE B4 -1 291 44 3 655 784 251 0 27 chr13 9191328 9191347 -111092965 - B3 SINE B2 0 216 200 3 655 279 0 0 0 chr13 9191347 9191378 -111092934 + (ATTG)n Simple_repeat Simple_repeat 3 33 0 3 655 784 251 0 27 chr13 9191378 9191579 -111092733 - B3 SINE B2 -17 199 3 3 655 327 211 18 0 chr13 9191620 9191677 -111092635 + ID_B1 SINE B4 151 208 -16 3 655 368 155 14 0 chr13 9191679 9191750 -111092562 + GA-rich Low_complexity Low_complexity 3 74 0 3 655 1063 254 3 47 chr13 9192317 9192618 -111091694 + B4A SINE B4 1 288 -4 3 655 459 186 19 38 chr13 9192823 9192929 -111091383 - B1F SINE Alu 0 149 46 3 655 393 299 43 36 chr13 9192972 9193111 -111091201 - B1F SINE Alu 0 149 10 3 655 314 323 40 8 chr13 9193162 9193287 -111091025 - MLT1G1 LTR MaLR -348 231 103 3 655 1735 138 99 75 chr13 9193325 9193547 -111090765 - ORR1C2 LTR MaLR 0 384 171 3 655 276 0 122 0 chr13 9193547 9193596 -111090716 + (CAGAGA)n Simple_repeat Simple_repeat 2 56 0 3 655 1735 138 99 75 chr13 9193596 9193748 -111090564 - ORR1C2 LTR MaLR -214 170 2 3 655 360 0 0 0 chr13 9194141 9194181 -111090131 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 655 1155 111 47 0 chr13 9194272 9194443 -111089869 + B2_Mm1t SINE B2 1 179 -14 3 655 358 109 358 0 chr13 9194475 9194584 -111089728 + B2_Mm2 SINE B2 47 194 -1 3 655 1159 61 0 20 chr13 9194743 9194893 -111089419 + B1_Mus2 SINE Alu 1 147 0 3 655 513 232 20 0 chr13 9194926 9195025 -111089287 - B3 SINE B2 -2 214 114 3 655 186 71 0 0 chr13 9195472 9195500 -111088812 + (CTTG)n Simple_repeat Simple_repeat 2 29 0 3 655 406 154 0 30 chr13 9195512 9195579 -111088733 - B1_Mur1 SINE Alu -43 106 42 3 655 298 334 4 27 chr13 9195682 9195794 -111088518 + B1F1 SINE Alu 1 109 -8 3 655 402 280 21 0 chr13 9196344 9196437 -111087875 - PB1D10 SINE Alu -5 112 18 3 655 792 313 35 39 chr13 9196488 9196771 -111087541 - B4A SINE B4 -10 282 1 3 655 648 167 0 0 chr13 9197289 9197457 -111086855 + CT-rich Low_complexity Low_complexity 1 168 0 3 655 204 188 0 77 chr13 9197643 9197695 -111086617 + MIRm SINE MIR 228 275 -1 3 655 616 289 87 87 chr13 9197946 9198223 -111086089 + B4A SINE B4 2 278 -14 3 655 618 204 8 132 chr13 9199182 9199415 -111084897 - B4 SINE B4 0 292 102 3 655 633 169 127 16 chr13 9199476 9199602 -111084710 + B1_Mur4 SINE Alu 1 140 -10 3 655 828 172 131 49 chr13 9199622 9199805 -111084507 - B3A SINE B2 0 198 1 3 655 454 277 9 26 chr13 9199821 9199936 -111084376 - B1F2 SINE Alu 0 149 37 3 655 441 122 0 0 chr13 9200047 9200121 -111084191 + (GGGA)n Simple_repeat Simple_repeat 3 76 0 3 655 252 59 0 0 chr13 9200123 9200157 -111084155 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 3 655 402 336 5 51 chr13 9201079 9201295 -111083017 - L1MB8 LINE L1 -21 6157 5952 3 655 248 77 26 0 chr13 9201399 9201438 -111082874 + (ATTG)n Simple_repeat Simple_repeat 1 40 0 3 655 440 313 35 0 chr13 9201457 9201572 -111082740 - RSINE1 SINE B4 -43 122 4 3 655 237 257 0 63 chr13 9201618 9201697 -111082615 - L1M2 LINE L1 -438 5862 5789 3 655 396 206 122 8 chr13 9201701 9201869 -111082443 - L1M2 LINE L1 -903 5388 5177 3 655 469 270 0 10 chr13 9201974 9202075 -111082237 - PB1D10 SINE Alu -9 108 9 4 655 319 330 0 10 chr13 9201987 9202085 -111082227 - ID_B1 SINE B4 -48 176 80 4 655 798 274 89 34 chr13 9202092 9202417 -111081895 - L1M2 LINE L1 -1049 5094 4752 3 655 691 218 0 52 chr13 9202450 9202605 -111081707 - B1_Mur1 SINE Alu -2 147 1 4 655 239 185 18 18 chr13 9202607 9202662 -111081650 - L1M2 LINE L1 -1387 4756 4702 3 655 1412 212 75 11 chr13 9202698 9203046 -111081266 + ORR1D2 LTR MaLR 1 370 0 4 655 1317 259 68 0 chr13 9203065 9203420 -111080892 + MTEa LTR MaLR 1 379 0 4 655 1408 142 9 5 chr13 9203423 9203642 -111080670 + URR1B DNA MER1_type 6 225 0 4 655 633 189 0 71 chr13 9203704 9203858 -111080454 - B1_Mur1 SINE Alu -5 144 2 4 655 459 259 58 14 chr13 9203859 9204067 -111080245 - L1M2 LINE L1 -3673 2470 2254 3 655 35934 38 8 29 chr13 9204066 9205767 -111078545 - L1Md_F3 LINE L1 -14 6570 4876 4 655 1268 60 0 0 chr13 9205767 9205935 -111078377 + L1Md_F2 LINE L1 6415 6582 0 4 655 35934 62 5 61 chr13 9205935 9210704 -111073608 - L1Md_F3 LINE L1 -1008 4875 446 4 655 6191 83 23 17 chr13 9210713 9211767 -111072545 - L1VL2 LINE L1 -2409 1206 147 4 655 771 368 90 23 chr13 9211847 9212537 -111071775 - L1MD2 LINE L1 -5745 802 67 4 655 23 0 0 0 chr13 9212700 9212723 -111071589 + AT_rich Low_complexity Low_complexity 1 23 0 4 655 442 260 0 39 chr13 9212768 9212813 -111071499 - ID_B1 SINE B4 -16 208 164 4 655 1453 192 145 6 chr13 9212813 9213003 -111071309 - ORR1D1 LTR MaLR 0 374 163 4 655 495 33 0 0 chr13 9213003 9213064 -111071248 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 655 1453 192 145 6 chr13 9213064 9213198 -111071114 - ORR1D1 LTR MaLR -212 162 5 4 655 442 260 0 39 chr13 9213198 9213256 -111071056 - ID_B1 SINE B4 -61 163 109 4 655 420 280 19 0 chr13 9213296 9213403 -111070909 - PB1D7 SINE Alu -10 110 2 4 655 231 264 178 25 chr13 9213404 9213567 -111070745 - L1MEf LINE L1 -4446 1678 1491 4 655 458 337 80 72 chr13 9213597 9213859 -111070453 - L1MEf LINE L1 -4758 1442 1190 4 655 2455 74 3 58 chr13 9213859 9214203 -111070109 - ORR1A2 LTR MaLR 0 327 3 4 655 458 337 80 72 chr13 9214203 9214314 -111069998 - L1MEf LINE L1 -5011 1189 1066 4 655 656 249 25 49 chr13 9214326 9214529 -111069783 - B3A SINE B2 0 198 1 4 655 348 278 21 0 chr13 9214539 9214636 -111069676 - PB1D10 SINE Alu -7 110 12 4 655 1692 194 110 3 chr13 9214709 9215055 -111069257 + ORR1C2 LTR MaLR 2 384 0 4 655 300 333 93 44 chr13 9215066 9215270 -111069042 - L1MEf LINE L1 -5104 990 777 4 655 679 258 86 0 chr13 9215288 9215486 -111068826 - B3 SINE B2 0 216 2 4 655 246 285 131 70 chr13 9215508 9215806 -111068506 - L1MEf LINE L1 -5340 754 439 4 655 323 44 22 0 chr13 9215871 9215916 -111068396 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 655 718 167 23 11 chr13 9215916 9216092 -111068220 + CT-rich Low_complexity Low_complexity 2 179 0 4 655 754 235 27 0 chr13 9216561 9216710 -111067602 + B3A SINE B2 2 154 -44 4 655 246 105 0 0 chr13 9216710 9216748 -111067564 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 655 451 301 38 60 chr13 9216748 9216782 -111067530 + B2_Mm2 SINE B2 147 180 -15 4 655 342 0 0 0 chr13 9216785 9216823 -111067489 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 4 655 1002 129 0 0 chr13 9217779 9217942 -111066370 + (TG)n Simple_repeat Simple_repeat 2 164 0 4 655 469 279 114 0 chr13 9217948 9218088 -111066224 - RSINE1 SINE B4 -9 156 1 4 655 919 280 10 10 chr13 9218120 9218322 -111065990 + ID_B1 SINE B4 2 203 -21 4 655 225 262 94 47 chr13 9218600 9218728 -111065584 + L1M5 LINE L1 5368 5501 -623 4 655 1122 99 7 0 chr13 9218839 9218991 -111065321 + B2_Mm1t SINE B2 2 154 -39 4 655 275 150 17 0 chr13 9218991 9219051 -111065261 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 655 1066 108 6 13 chr13 9219075 9219234 -111065078 + B2_Mm2 SINE B2 1 158 -37 4 655 392 147 351 18 chr13 9219263 9219374 -111064938 + B2_Mm2 SINE B2 47 194 -1 4 655 353 146 0 0 chr13 9219411 9219466 -111064846 + B2_Mm2 SINE B2 47 101 -94 4 655 2086 157 6 6 chr13 9219517 9219862 -111064450 - ORR1C1 LTR MaLR -28 350 6 4 655 233 296 101 94 chr13 9219935 9220084 -111064228 + MLT1H2 LTR MaLR 67 216 -273 4 655 559 190 86 8 chr13 9220270 9220387 -111063925 - ID_B1 SINE B4 -9 215 90 4 655 763 281 101 130 chr13 9220555 9220895 -111063417 - MLT1A1 LTR MaLR 0 374 45 4 655 618 265 26 26 chr13 9220912 9221067 -111063245 - MTEa LTR MaLR -51 328 174 4 655 269 232 37 0 chr13 9221074 9221156 -111063156 + CT-rich Low_complexity Low_complexity 5 89 0 4 655 302 329 77 0 chr13 9221157 9221300 -111063012 - HAL1-3A_ME LINE L1 -421 2437 2284 4 655 220 177 16 31 chr13 9221300 9221364 -111062948 + CT-rich Low_complexity Low_complexity 1 63 0 4 655 324 296 93 60 chr13 9221364 9221515 -111062797 - HAL1-3A_ME LINE L1 -419 2439 2284 4 655 827 239 12 6 chr13 9222127 9222287 -111062025 + ID_B1 SINE B4 9 169 -55 4 655 231 125 0 0 chr13 9222315 9222355 -111061957 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 655 192 77 0 0 chr13 9222716 9222742 -111061570 + (CGAGG)n Simple_repeat Simple_repeat 4 29 0 4 655 8295 35 0 0 chr13 9224301 9225565 -111058747 - L1Md_T LINE L1 0 6582 5319 4 655 472 295 20 7 chr13 9226575 9226725 -111057587 + B4A SINE B4 2 153 -139 4 655 553 170 47 0 chr13 9226893 9226999 -111057313 + PB1D10 SINE Alu 7 117 0 4 655 295 261 122 8 chr13 9227137 9227163 -111057149 + B1F2 SINE Alu 1 144 -3 4 655 363 252 29 0 chr13 9227163 9227266 -111057046 + ID_B1 SINE B4 115 220 -4 4 655 180 254 0 0 chr13 9227402 9227461 -111056851 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 655 299 213 0 13 chr13 9227477 9227553 -111056759 + GA-rich Low_complexity Low_complexity 3 77 0 4 655 211 98 39 19 chr13 9227569 9227621 -111056691 + (CAGA)n Simple_repeat Simple_repeat 4 56 0 4 655 215 73 54 18 chr13 9228611 9228667 -111055645 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 655 670 264 0 63 chr13 9228712 9228902 -111055410 - B3A SINE B2 -16 182 5 4 655 2586 68 41 5 chr13 9229185 9229554 -111054758 + MTB_Mm LTR MaLR 22 403 -4 4 655 1618 25 5 10 chr13 9229554 9229759 -111054553 + L1Md_F2 LINE L1 6379 6582 0 4 655 290 312 0 0 chr13 9229857 9229937 -111054375 - ID_B1 SINE B4 -36 188 109 4 655 207 0 0 0 chr13 9230280 9230303 -111054009 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 655 666 250 172 42 chr13 9230338 9230561 -111053751 - B4A SINE B4 -12 280 22 4 655 2249 135 70 25 chr13 9230561 9230963 -111053349 + MTC LTR MaLR 2 421 0 4 655 666 250 172 42 chr13 9230963 9230977 -111053335 - B4A SINE B4 -271 21 12 4 655 350 114 12 37 chr13 9231020 9231102 -111053210 + (TG)n Simple_repeat Simple_repeat 2 81 0 4 655 364 314 35 86 chr13 9231110 9231228 -111053084 - RSINE1 SINE B4 0 165 51 4 655 4317 82 36 0 chr13 9231228 9231790 -111052522 + MT2B2 LTR ERVL 3 584 0 4 655 364 314 35 86 chr13 9231790 9231845 -111052467 - RSINE1 SINE B4 -115 50 1 4 655 453 262 28 0 chr13 9231851 9231958 -111052354 - PB1D10 SINE Alu -7 110 1 4 655 22 70 0 0 chr13 9232167 9232210 -111052102 + AT_rich Low_complexity Low_complexity 1 43 0 4 655 192 40 0 0 chr13 9232211 9232236 -111052076 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 4 655 1301 202 46 23 chr13 9232254 9232513 -111051799 + Lx5 LINE L1 6622 6886 -164 4 655 335 147 29 0 chr13 9232534 9232602 -111051710 + GA-rich Low_complexity Low_complexity 3 72 0 4 655 1092 281 52 24 chr13 9232833 9233202 -111051110 + MTEa LTR MaLR 1 379 0 4 655 985 270 74 25 chr13 9233319 9233684 -111050628 - MTD LTR MaLR 0 419 37 4 655 481 219 92 15 chr13 9233688 9233818 -111050494 + B4 SINE B4 1 140 -152 4 655 236 276 70 63 chr13 9234011 9234154 -111050158 - B4 SINE B4 -148 144 1 4 655 389 308 7 43 chr13 9234221 9234360 -111049952 + ID_B1 SINE B4 90 223 -1 4 655 256 175 27 70 chr13 9234603 9234666 -111049646 - ID2 SINE ID -3 80 11 4 655 906 218 15 19 chr13 9234776 9234982 -111049330 + B3 SINE B2 7 211 -5 4 655 357 24 0 0 chr13 9235206 9235248 -111049064 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 4 655 213 36 0 0 chr13 9235270 9235280 -111049032 + (TA)n Simple_repeat Simple_repeat 2 11 0 4 655 312 27 0 0 chr13 9235280 9235317 -111048995 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 655 213 36 0 0 chr13 9235317 9235334 -111048978 + (TA)n Simple_repeat Simple_repeat 1 17 0 4 655 893 43 8 0 chr13 9235336 9235453 -111048859 + B1_Mm SINE Alu 30 147 0 4 655 252 86 0 0 chr13 9235456 9235491 -111048821 + (A)n Simple_repeat Simple_repeat 1 35 0 4 655 452 318 38 0 chr13 9235917 9236049 -111048263 + ID_B1 SINE B4 81 217 -7 4 655 327 372 30 20 chr13 9236052 9236255 -111048057 + B4A SINE B4 1 205 -87 4 655 396 267 6 88 chr13 9236462 9236622 -111047690 - B1F2 SINE Alu -2 147 1 4 655 358 278 72 36 chr13 9236633 9236771 -111047541 - L1MA5A LINE L1 -12 6285 6143 4 655 246 220 51 0 chr13 9236913 9236972 -111047340 - L1MA5A LINE L1 -354 5949 5888 4 655 2169 142 5 28 chr13 9237353 9237750 -111046562 + RMER10B LTR ERVL 3 390 -8 4 655 1073 168 9 42 chr13 9237811 9237898 -111046414 + B4 SINE B4 2 86 -206 4 655 242 0 0 57 chr13 9237898 9237933 -111046379 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 4 655 1073 168 9 42 chr13 9237933 9238062 -111046250 + B4 SINE B4 87 211 -81 4 655 432 0 0 0 chr13 9238063 9238111 -111046201 + (GA)n Simple_repeat Simple_repeat 2 49 0 4 655 189 0 0 0 chr13 9238168 9238189 -111046123 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 4 655 213 224 0 20 chr13 9238251 9238301 -111046011 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 655 426 304 140 46 chr13 9238348 9238676 -111045636 - ORR1E LTR MaLR 0 359 1 4 655 539 283 122 0 chr13 9239665 9239845 -111044467 - ID_B1 SINE B4 -12 212 11 4 655 2118 79 6 28 chr13 9240003 9240327 -111043985 + ORR1A2 LTR MaLR 3 319 -8 4 655 217 68 22 22 chr13 9240502 9240547 -111043765 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 4 655 1129 42 28 0 chr13 9240553 9240696 -111043616 - B1_Mus2 SINE Alu 0 147 1 5 655 408 238 38 33 chr13 9240775 9240952 -111043360 - L1MA4A LINE L1 -221 5935 5759 5 655 1250 251 65 14 chr13 9240958 9241310 -111043002 - ORR1D2 LTR MaLR 0 370 1 5 655 533 263 120 0 chr13 9241736 9241869 -111042443 - RSINE1 SINE B4 -16 149 1 5 655 274 215 144 41 chr13 9241869 9241966 -111042346 - PB1D7 SINE Alu -2 118 12 5 655 778 197 7 33 chr13 9242005 9242157 -111042155 - B1_Mur4 SINE Alu 0 150 3 5 655 377 297 0 38 chr13 9242187 9242292 -111042020 + RSINE1 SINE B4 3 103 -62 5 655 351 222 66 21 chr13 9242477 9242605 -111041707 + B3A SINE B2 2 126 -67 5 655 319 316 44 0 chr13 9243426 9243584 -111040728 + L1ME3B LINE L1 3580 3744 -2402 5 655 499 235 79 74 chr13 9243764 9243980 -111040332 - MTEa LTR MaLR 0 379 163 5 655 308 101 12 169 chr13 9243990 9244073 -111040239 - B4 SINE B4 -1 291 222 5 655 441 0 0 0 chr13 9244084 9244133 -111040179 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 655 522 297 160 14 chr13 9244181 9244393 -111039919 - B4A SINE B4 -25 267 25 5 655 328 208 60 33 chr13 9244400 9244559 -111039753 + URR1B DNA MER1_type 1 225 0 5 655 930 248 31 9 chr13 9244579 9244803 -111039509 - B4A SINE B4 -63 229 1 5 655 538 279 14 101 chr13 9244803 9244988 -111039324 - MTEa LTR MaLR -212 167 1 5 655 659 292 138 24 chr13 9245030 9245531 -111038781 + L1ME3B LINE L1 3956 4513 -1633 5 655 333 0 0 0 chr13 9245917 9245954 -111038358 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 655 451 273 17 101 chr13 9245973 9246152 -111038160 - B4A SINE B4 -48 244 81 5 655 295 167 13 77 chr13 9246160 9246238 -111038074 - B3 SINE B2 -6 210 138 5 655 284 263 85 73 chr13 9246275 9246357 -111037955 - RSINE1 SINE B4 -5 160 78 5 655 645 250 7 0 chr13 9246355 9246491 -111037821 - B3 SINE B2 -79 137 1 5 655 336 286 0 71 chr13 9246557 9246670 -111037642 - ID_B1 SINE B4 -6 218 114 5 655 7435 91 31 29 chr13 9246670 9247847 -111036465 - MusHAL1 LINE L1 -849 1863 685 5 655 507 336 102 14 chr13 9248031 9248375 -111035937 + L1ME3B LINE L1 5562 5935 -305 5 655 50 18 0 0 chr13 9248375 9248432 -111035880 + AT_rich Low_complexity Low_complexity 1 57 0 5 655 469 298 63 48 chr13 9248496 9248764 -111035548 + B4A SINE B4 1 272 -20 5 655 1434 248 55 28 chr13 9248782 9249187 -111035125 + MTD LTR MaLR 1 402 -17 5 655 323 230 92 0 chr13 9249329 9249416 -111034896 + B4 SINE B4 113 207 -85 5 655 232 200 20 0 chr13 9249442 9249492 -111034820 - MTE2b LTR MaLR -309 70 20 5 655 727 247 88 18 chr13 9249509 9249736 -111034576 + RMER5 LTR ERV1 292 534 0 5 655 780 235 16 53 chr13 9250437 9250626 -111033686 - B3A SINE B2 -16 182 1 5 655 719 283 40 45 chr13 9251690 9251912 -111032400 + ID_B1 SINE B4 1 221 -3 5 655 313 148 49 37 chr13 9252116 9252278 -111032034 + (TA)n Simple_repeat Simple_repeat 2 165 0 5 655 376 273 121 0 chr13 9252848 9252980 -111031332 + RSINE1 SINE B4 12 159 -6 5 655 1605 36 0 25 chr13 9253106 9253304 -111031008 + B2_Mm1t SINE B2 1 193 0 5 655 378 0 0 0 chr13 9253610 9253652 -111030660 + (GA)n Simple_repeat Simple_repeat 2 43 0 5 655 385 260 209 52 chr13 9253673 9253807 -111030505 + RSINE1 SINE B4 8 162 -3 5 655 228 289 98 16 chr13 9254111 9254234 -111030078 + L1M5 LINE L1 3269 3401 -2745 5 655 1218 69 10 37 chr13 9254556 9254850 -111029462 + (TG)n Simple_repeat Simple_repeat 1 286 0 5 655 320 264 76 11 chr13 9254850 9254942 -111029370 + B4A SINE B4 123 220 -72 5 655 259 329 64 55 chr13 9254960 9254973 -111029339 + B4 SINE B4 72 198 -94 5 655 394 259 27 27 chr13 9254973 9255084 -111029228 + PB1D9 SINE Alu 1 111 -9 5 655 432 0 0 0 chr13 9255084 9255132 -111029180 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 655 259 329 64 55 chr13 9255132 9255226 -111029086 + B4 SINE B4 199 292 0 5 655 261 218 0 0 chr13 9255226 9255281 -111029031 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 655 277 318 51 17 chr13 9255281 9255457 -111028855 + L1MEf LINE L1 1321 1502 -4698 5 655 328 200 20 0 chr13 9255990 9256090 -111028222 + CT-rich Low_complexity Low_complexity 2 103 0 5 655 491 255 80 66 chr13 9256101 9256252 -111028060 - ID_B1 SINE B4 0 224 72 5 655 3113 47 36 13 chr13 9256298 9256689 -111027623 + MTB LTR MaLR 1 400 0 5 655 1773 224 11 68 chr13 9256709 9257168 -111027144 - RLTR20C LTR ERVK -99 435 3 5 655 347 167 39 0 chr13 9257217 9257295 -111027017 + CT-rich Low_complexity Low_complexity 3 83 0 5 655 389 302 101 0 chr13 9257327 9257456 -111026856 - B1F2 SINE Alu -4 145 4 5 655 316 294 29 29 chr13 9257502 9257642 -111026670 + L1MEf LINE L1 1917 2056 -4144 5 655 575 81 12 0 chr13 9257643 9257729 -111026583 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 5 655 23 0 0 0 chr13 9258104 9258127 -111026185 + AT_rich Low_complexity Low_complexity 1 23 0 5 655 605 203 57 0 chr13 9258404 9258527 -111025785 + B1F2 SINE Alu 4 133 -16 5 655 221 370 0 0 chr13 9258562 9258643 -111025669 + ID SINE ID 2 82 -142 5 655 357 296 59 7 chr13 9258747 9258850 -111025462 + B4 SINE B4 2 108 -184 5 655 669 56 0 0 chr13 9258850 9258940 -111025372 + (CA)n Simple_repeat Simple_repeat 1 90 0 5 655 357 296 59 7 chr13 9258940 9258972 -111025340 + B4 SINE B4 109 144 -148 5 655 201 163 0 0 chr13 9258975 9259024 -111025288 + GA-rich Low_complexity Low_complexity 2 50 0 5 655 397 245 21 21 chr13 9259066 9259162 -111025150 - RLTR20B2 LTR ERVK 0 560 465 5 655 1206 279 95 38 chr13 9259188 9259452 -111024860 - RLTR20B2 LTR ERVK -51 483 192 5 655 828 29 0 0 chr13 9259452 9259555 -111024757 + (TC)n Simple_repeat Simple_repeat 2 104 0 5 655 1206 161 46 9 chr13 9259555 9259746 -111024566 - RLTR20B2 LTR ERVK -369 191 1 5 655 612 211 101 90 chr13 9259777 9259840 -111024472 + B4 SINE B4 81 145 -147 5 655 213 94 0 0 chr13 9259840 9259872 -111024440 + (CAGA)n Simple_repeat Simple_repeat 1 32 0 5 655 612 211 101 90 chr13 9259872 9259996 -111024316 + B4 SINE B4 146 270 -22 5 655 449 45 0 29 chr13 9260058 9260127 -111024185 + (CAGAGA)n Simple_repeat Simple_repeat 2 68 0 5 655 292 266 64 9 chr13 9260203 9260313 -111023999 + MLT1B LTR MaLR 258 373 -17 5 655 24 53 0 0 chr13 9260594 9260632 -111023680 + AT_rich Low_complexity Low_complexity 1 38 0 5 655 495 281 100 43 chr13 9260679 9260910 -111023402 - B4A SINE B4 -8 284 41 5 655 522 0 0 0 chr13 9260954 9261012 -111023300 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 655 700 259 103 26 chr13 9261290 9261524 -111022788 + B4A SINE B4 1 252 -40 5 655 252 86 0 0 chr13 9261524 9261559 -111022753 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 655 370 321 44 129 chr13 9262366 9262638 -111021674 + B4 SINE B4 41 289 -3 5 655 204 125 0 0 chr13 9262695 9262727 -111021585 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 655 579 66 0 0 chr13 9262768 9262844 -111021468 + (TTTC)n Simple_repeat Simple_repeat 4 79 0 5 655 1412 61 0 16 chr13 9262846 9263030 -111021282 - B2_Mm2 SINE B2 -14 181 1 5 655 302 0 26 0 chr13 9263045 9263083 -111021229 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 655 1166 51 0 0 chr13 9263083 9263220 -111021092 - B1_Mus1 SINE Alu -10 138 2 5 655 577 296 17 23 chr13 9263235 9263408 -111020904 - MTEb LTR MaLR -125 254 83 5 655 2048 178 110 23 chr13 9263408 9263516 -111020796 + Lx4B LINE L1 6634 6737 -321 5 655 2459 81 0 47 chr13 9263516 9263855 -111020457 + ORR1A2 LTR MaLR 5 327 0 5 655 2048 178 110 23 chr13 9263855 9264137 -111020175 + Lx4B LINE L1 6738 7058 0 5 655 251 258 15 0 chr13 9264166 9264232 -111020080 - MTEb LTR MaLR -309 70 4 5 655 519 289 45 30 chr13 9264551 9264751 -111019561 - RMER5 LTR ERV1 -140 394 192 5 655 323 236 0 53 chr13 9265678 9265754 -111018558 - ID4 SINE ID -10 73 2 5 655 1669 141 62 32 chr13 9265800 9266236 -111018076 - RMER17C LTR ERVK -517 441 16 5 655 236 324 165 85 chr13 9266259 9266495 -111017817 - B4A SINE B4 -14 278 24 5 655 372 43 0 0 chr13 9266520 9266566 -111017746 + (TTCC)n Simple_repeat Simple_repeat 4 49 0 5 655 492 298 7 7 chr13 9266571 9266713 -111017599 - B1_Mur1 SINE Alu 0 149 8 5 655 1157 216 163 41 chr13 9267272 9267610 -111016702 - MTEa LTR MaLR 0 379 1 5 655 546 16 0 0 chr13 9267722 9267785 -111016527 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 5 655 1312 246 35 6 chr13 9268216 9268563 -111015749 + ORR1D2 LTR MaLR 1 357 -13 5 655 293 100 0 20 chr13 9268808 9268859 -111015453 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 5 655 242 340 144 10 chr13 9269290 9269394 -111014918 + RSINE1 SINE B4 13 130 -35 5 655 242 171 0 0 chr13 9269413 9269454 -111014858 + ID SINE ID 4 44 -180 5 655 252 256 44 11 chr13 9269473 9269564 -111014748 + ID_B1 SINE B4 131 224 0 5 655 723 215 14 7 chr13 9270135 9270280 -111014032 - B1_Mur2 SINE Alu -1 148 3 5 655 230 354 15 0 chr13 9270299 9270364 -111013948 - PB1 SINE Alu -59 68 3 5 655 746 62 9 0 chr13 9271080 9271193 -111013119 + (TG)n Simple_repeat Simple_repeat 2 115 0 5 655 456 277 10 0 chr13 9271197 9271298 -111013014 - RSINE1 SINE B4 -60 105 4 5 655 729 296 65 44 chr13 9271458 9271843 -111012469 - Lx8 LINE L1 -2 7471 7079 5 655 219 69 0 0 chr13 9271896 9271925 -111012387 + (T)n Simple_repeat Simple_repeat 1 29 0 5 655 655 203 248 43 chr13 9272393 9272691 -111011621 - Lx7 LINE L1 -7 7689 7331 5 655 590 224 0 60 chr13 9273223 9273356 -111010956 + B3 SINE B2 10 134 -82 5 655 323 261 433 0 chr13 9273415 9273567 -111010745 + ID_B1 SINE B4 1 218 -6 5 655 2686 242 104 21 chr13 9274006 9274796 -111009516 + Lx8 LINE L1 6382 7236 -237 5 655 225 0 0 0 chr13 9274884 9274909 -111009403 + (TAA)n Simple_repeat Simple_repeat 2 26 0 5 655 23 0 0 0 chr13 9275447 9275470 -111008842 + AT_rich Low_complexity Low_complexity 1 23 0 5 655 184 87 0 80 chr13 9276071 9276121 -111008191 + (CCCG)n Simple_repeat Simple_repeat 3 48 0 5 655 24 0 0 0 chr13 9276331 9276355 -111007957 + GC_rich Low_complexity Low_complexity 1 24 0 6 655 22 0 0 0 chr13 9276378 9276400 -111007912 + GC_rich Low_complexity Low_complexity 1 22 0 6 655 25 51 0 0 chr13 9276417 9276456 -111007856 + GC_rich Low_complexity Low_complexity 1 39 0 6 655 548 179 0 8 chr13 9276495 9276613 -111007699 + (TG)n Simple_repeat Simple_repeat 1 117 0 6 655 449 78 0 38 chr13 9276805 9276885 -111007427 + (CCA)n Simple_repeat Simple_repeat 3 79 0 6 655 326 58 39 0 chr13 9278447 9278499 -111005813 + (GAAAA)n Simple_repeat Simple_repeat 2 55 0 6 655 342 320 73 104 chr13 9278896 9279060 -111005252 + B4 SINE B4 65 223 -69 6 655 721 159 62 23 chr13 9278936 9279065 -111005247 + B1_Mur1 SINE Alu 15 148 -1 6 655 448 320 94 35 chr13 9280230 9280431 -111003881 - ID_B1 SINE B4 -9 215 3 6 655 223 359 26 70 chr13 9280450 9280564 -111003748 - PB1D9 SINE Alu -11 109 1 6 655 234 0 0 0 chr13 9280821 9280847 -111003465 + (T)n Simple_repeat Simple_repeat 1 26 0 6 655 285 29 0 0 chr13 9281317 9281351 -111002961 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 6 655 195 162 0 0 chr13 9282202 9282239 -111002073 + T-rich Low_complexity Low_complexity 1 37 0 6 655 226 238 14 87 chr13 9283557 9283626 -111000686 + LTR81B LTR ERV1? 392 455 -938 6 655 213 240 0 91 chr13 9284173 9284228 -111000084 + PB1 SINE Alu 1 50 -77 6 655 218 222 0 0 chr13 9284259 9284304 -111000008 + (TAA)n Simple_repeat Simple_repeat 2 46 0 6 655 409 261 8 25 chr13 9284694 9284812 -110999500 + PB1D10 SINE Alu 1 116 -1 6 655 443 223 113 23 chr13 9284978 9285111 -110999201 - ID_B1 SINE B4 0 224 80 6 655 405 0 0 0 chr13 9285124 9285169 -110999143 + (TCTA)n Simple_repeat Simple_repeat 3 47 0 6 655 465 309 81 10 chr13 9285174 9285332 -110998980 - B3A SINE B2 -35 181 15 6 655 21 36 0 0 chr13 9286842 9286870 -110997442 + AT_rich Low_complexity Low_complexity 1 28 0 6 655 891 234 130 19 chr13 9287045 9287307 -110997005 - B4A SINE B4 0 292 2 6 655 232 193 175 0 chr13 9287358 9287415 -110996897 + tRNA-Ala-GCA tRNA tRNA 3 69 -6 6 655 279 0 0 0 chr13 9287418 9287449 -110996863 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 6 655 1131 55 0 20 chr13 9287465 9287614 -110996698 - B1_Mm SINE Alu 0 147 2 6 655 183 337 11 67 chr13 9287742 9287831 -110996481 - L4 LINE RTE -800 1229 1146 6 655 1107 130 130 0 chr13 9287989 9288189 -110996123 + URR1A DNA MER1_type 1 226 0 6 655 867 204 166 0 chr13 9288220 9288401 -110995911 + ID_B1 SINE B4 4 214 -10 6 655 269 325 0 38 chr13 9289006 9289086 -110995226 - AluG_3 SINE Alu -97 214 138 6 655 311 197 45 0 chr13 9289480 9289546 -110994766 - ID4_ SINE ID -13 70 2 6 655 347 259 37 0 chr13 9289978 9290059 -110994253 - RSINE1 SINE B4 -4 161 78 6 655 255 311 171 6 chr13 9290072 9290253 -110994059 - B3 SINE B2 -5 211 1 6 655 820 279 6 0 chr13 9290094 9290255 -110994057 - RSINE1 SINE B4 -3 162 1 6 655 349 204 127 119 chr13 9290262 9290422 -110993890 - B4A SINE B4 -73 219 55 6 655 1305 231 35 21 chr13 9291382 9291670 -110992642 - B4A SINE B4 0 292 1 6 655 1638 42 0 0 chr13 9292238 9292429 -110991883 - B2_Mm1a SINE B2 -1 192 2 6 655 1019 38 114 0 chr13 9293324 9293456 -110990856 - B1_Mm SINE Alu 0 147 1 6 655 315 0 0 0 chr13 9293601 9293636 -110990676 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 655 754 131 0 0 chr13 9293640 9293747 -110990565 - B1_Mus1 SINE Alu -40 108 2 6 655 371 252 0 138 chr13 9293747 9293783 -110990529 - MT2B LTR ERVL -446 155 139 6 655 1395 89 5 5 chr13 9293863 9294056 -110990256 - B2_Mm2 SINE B2 -1 194 2 6 655 358 279 0 0 chr13 9294702 9294788 -110989524 - ID_B1 SINE B4 0 224 139 6 655 630 324 17 0 chr13 9294819 9294995 -110989317 - B3A SINE B2 -18 180 2 6 655 483 270 51 7 chr13 9295006 9295144 -110989168 - ID_B1 SINE B4 -1 223 80 6 655 396 0 0 0 chr13 9295812 9295856 -110988456 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 6 655 784 18 35 9 chr13 9296444 9296559 -110987753 + (TG)n Simple_repeat Simple_repeat 1 118 0 6 655 206 130 35 53 chr13 9297583 9297640 -110986672 + (CCAA)n Simple_repeat Simple_repeat 2 57 0 6 655 280 320 30 46 chr13 9298464 9298595 -110985717 - MER20 DNA MER1_type 0 219 91 6 655 1080 88 12 12 chr13 9298807 9298979 -110985333 + (TTTTC)n Simple_repeat Simple_repeat 3 174 0 6 655 198 0 0 0 chr13 9298980 9299002 -110985310 + (TTTC)n Simple_repeat Simple_repeat 3 24 0 6 655 275 271 14 0 chr13 9299007 9299077 -110985235 - ID4_ SINE ID -9 74 4 6 655 1367 250 42 66 chr13 9299712 9300093 -110984219 - MTEa LTR MaLR 0 379 8 6 655 324 120 0 0 chr13 9300311 9300361 -110983951 + (T)n Simple_repeat Simple_repeat 1 50 0 6 655 1094 89 0 0 chr13 9300361 9300507 -110983805 - B1_Mm SINE Alu 0 147 2 6 655 510 265 0 25 chr13 9300589 9300709 -110983603 + PB1D10 SINE Alu 1 117 0 6 655 313 247 12 0 chr13 9300793 9300874 -110983438 - Tigger13a DNA MER2_type -536 235 154 6 655 395 38 0 19 chr13 9301538 9301592 -110982720 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 6 655 886 239 114 33 chr13 9301613 9301885 -110982427 - MTEb LTR MaLR -66 313 20 6 655 2036 78 7 3 chr13 9301865 9302148 -110982164 + MTA_Mm LTR MaLR 11 294 -102 6 655 207 0 0 0 chr13 9302334 9302357 -110981955 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 655 1090 310 18 4 chr13 9302362 9302637 -110981675 - B4A SINE B4 -6 286 8 6 655 229 275 29 0 chr13 9302889 9302958 -110981354 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 655 951 270 64 4 chr13 9302977 9303241 -110981071 - B4A SINE B4 -11 281 2 6 655 2343 133 30 27 chr13 9303362 9303764 -110980548 - RMER6A LTR ERVK 0 756 354 6 655 491 31 0 15 chr13 9303765 9303831 -110980481 + (TC)n Simple_repeat Simple_repeat 2 66 0 6 655 605 325 60 32 chr13 9304712 9304960 -110979352 - B4A SINE B4 -2 290 36 6 655 333 339 6 22 chr13 9305004 9305182 -110979130 + (TATG)n Simple_repeat Simple_repeat 4 178 0 6 655 21 0 0 0 chr13 9305605 9305626 -110978686 + AT_rich Low_complexity Low_complexity 1 21 0 6 81 808 278 28 59 chr13 9305930 9306217 -110978095 + B4A SINE B4 5 282 -10 6 656 213 318 33 13 chr13 9306703 9306856 -110977456 + (TATAG)n Simple_repeat Simple_repeat 5 160 0 6 656 653 320 64 20 chr13 9306951 9307155 -110977157 - Tigger5 DNA MER2_type -2193 213 1 6 656 210 158 0 0 chr13 9307296 9307334 -110976978 + T-rich Low_complexity Low_complexity 1 38 0 6 656 2031 165 30 3 chr13 9307917 9308281 -110976031 - ORR1C1 LTR MaLR 0 378 5 6 656 186 133 0 0 chr13 9308293 9308323 -110975989 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 6 656 417 97 0 0 chr13 9308327 9308389 -110975923 - B1_Mus2 SINE Alu -85 62 1 6 656 1670 31 0 0 chr13 9308634 9308827 -110975485 - B2_Mm1a SINE B2 0 193 1 6 656 1196 83 47 6 chr13 9309126 9309295 -110975017 + B2_Mm2 SINE B2 1 176 -19 6 656 931 116 7 39 chr13 9309305 9309458 -110974854 + B1_Mur3 SINE Alu 2 149 0 6 656 195 129 0 0 chr13 9309511 9309542 -110974770 + (CAG)n Simple_repeat Simple_repeat 2 32 0 6 656 317 312 35 26 chr13 9309702 9309817 -110974495 - PB1D10 SINE Alu -1 116 1 6 656 685 289 20 0 chr13 9309817 9309896 -110974416 - ID SINE ID -142 82 1 6 656 315 417 0 0 chr13 9309922 9310037 -110974275 - ID_B1 SINE B4 -29 195 81 6 656 561 214 264 21 chr13 9311572 9311811 -110972501 + RMER10A LTR ERVL 1 297 -145 6 656 1123 168 14 24 chr13 9311826 9312033 -110972279 + RMER10B LTR ERVL 194 398 0 6 656 1177 48 0 0 chr13 9312662 9312807 -110971505 + B1_Mus1 SINE Alu 2 146 -2 6 656 203 32 65 0 chr13 9312807 9312838 -110971474 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 6 656 481 347 139 12 chr13 9312998 9313170 -110971142 - B4A SINE B4 -8 284 92 6 656 351 0 0 0 chr13 9313170 9313209 -110971103 + (TTA)n Simple_repeat Simple_repeat 2 40 0 6 656 481 347 139 12 chr13 9313209 9313287 -110971025 - B4A SINE B4 -201 91 2 6 656 346 291 96 7 chr13 9313670 9313805 -110970507 - B1F SINE Alu -2 147 1 6 656 772 214 22 27 chr13 9314172 9314355 -110969957 + B3A SINE B2 2 183 -15 6 656 495 45 0 0 chr13 9314356 9314422 -110969890 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 656 478 285 92 0 chr13 9314572 9314702 -110969610 - B1F SINE Alu -7 142 1 6 656 2652 228 24 4 chr13 9316704 9317242 -110967070 + Lx6 LINE L1 6912 7460 0 6 656 822 113 0 0 chr13 9318232 9318356 -110965956 + (TTTTC)n Simple_repeat Simple_repeat 2 125 0 6 656 292 336 16 41 chr13 9318356 9318467 -110965845 + polypyrimidine Low_complexity Low_complexity 4 113 0 6 656 288 0 0 0 chr13 9318467 9318499 -110965813 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 656 486 0 0 0 chr13 9318782 9318836 -110965476 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 656 874 144 0 27 chr13 9320504 9320689 -110963623 + CT-rich Low_complexity Low_complexity 1 180 0 6 656 490 225 29 6 chr13 9320647 9320809 -110963503 + T-rich Low_complexity Low_complexity 12 177 0 6 656 1193 128 27 0 chr13 9320809 9320997 -110963315 - B2_Mm2 SINE B2 -1 194 2 6 656 23 0 0 0 chr13 9321135 9321158 -110963154 + AT_rich Low_complexity Low_complexity 1 23 0 7 656 1195 233 35 69 chr13 9321770 9322088 -110962224 - MTEa LTR MaLR -6 373 67 7 656 3573 75 13 9 chr13 9322088 9322637 -110961675 + MusHAL1 LINE L1 1530 2080 -632 7 656 3328 35 5 0 chr13 9322737 9323140 -110961172 - L1Md_F2 LINE L1 -12 6570 6166 7 656 329 232 58 0 chr13 9324047 9324116 -110960196 - MTEa LTR MaLR -306 73 1 7 656 1130 185 73 4 chr13 9325504 9325738 -110958574 - RLTR16 LTR ERVK -104 401 152 7 656 337 267 88 35 chr13 9326211 9326347 -110957965 - B1F SINE Alu 0 149 13 7 656 497 261 33 61 chr13 9327563 9327775 -110956537 - RMER10A LTR ERVL 0 442 237 7 656 1086 52 0 0 chr13 9327774 9327910 -110956402 + B1_Mm SINE Alu 12 147 0 7 656 549 232 97 82 chr13 9328047 9328254 -110956058 - RMER10A LTR ERVL -232 210 1 7 656 517 233 0 25 chr13 9328309 9328428 -110955884 - PB1D7 SINE Alu -2 118 3 7 656 25 0 0 0 chr13 9328459 9328484 -110955828 + AT_rich Low_complexity Low_complexity 1 25 0 7 656 21 0 0 0 chr13 9329290 9329311 -110955001 + AT_rich Low_complexity Low_complexity 1 21 0 7 656 341 242 27 100 chr13 9330628 9330738 -110953574 - B1_Mus2 SINE Alu -22 125 24 7 656 295 360 16 113 chr13 9330636 9330742 -110953570 - ID_B1 SINE B4 -27 197 101 7 656 357 306 129 0 chr13 9330742 9330866 -110953446 - B1F SINE Alu -9 140 1 7 656 295 360 16 113 chr13 9330866 9330953 -110953359 - ID_B1 SINE B4 -124 100 23 7 656 243 233 91 52 chr13 9331580 9331657 -110952655 - B1F1 SINE Alu 0 127 47 7 656 829 51 34 8 chr13 9332892 9333011 -110951301 - L1Md_F2 LINE L1 -1 6581 6460 7 656 1363 46 6 0 chr13 9333011 9333186 -110951126 + L1_Mm LINE L1 1273 1448 -4435 7 656 1522 50 11 6 chr13 9333699 9333882 -110950430 - B2_Mm2 SINE B2 -10 185 2 7 656 1067 290 39 69 chr13 9333935 9334324 -110949988 - MTEa LTR MaLR -2 377 1 7 656 353 253 13 0 chr13 9334548 9334627 -110949685 - PB1D10 SINE Alu -33 84 5 7 656 281 344 11 0 chr13 9334627 9334638 -110949674 - ID_B1 SINE B4 -59 165 75 7 656 226 321 0 0 chr13 9334641 9334697 -110949615 + MER5A DNA MER1_type 134 189 0 7 656 279 71 0 0 chr13 9337108 9337150 -110947162 + (A)n Simple_repeat Simple_repeat 1 42 0 7 656 624 237 18 0 chr13 9337512 9337626 -110946686 - RSINE1 SINE B4 -34 131 16 7 656 261 0 0 0 chr13 9337626 9337655 -110946657 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 7 656 400 119 159 5 chr13 9337655 9337755 -110946557 - B2_Mm2 SINE B2 -14 181 47 7 656 1151 101 6 0 chr13 9337789 9337948 -110946364 - B2_Mm1t SINE B2 -33 160 1 7 656 318 270 9 91 chr13 9338076 9338186 -110946126 - PB1D10 SINE Alu 0 117 17 7 656 435 331 10 56 chr13 9339037 9339235 -110945077 - RMER4A LTR ERVK -253 213 25 7 656 189 178 104 62 chr13 9339249 9339297 -110945015 - L2 LINE L2 -3278 141 92 7 656 395 338 113 23 chr13 9340016 9340237 -110944075 + MLT1D LTR MaLR 257 497 -8 7 656 527 309 21 7 chr13 9341221 9341361 -110942951 - ID_B1 SINE B4 -2 222 81 7 656 1790 196 76 25 chr13 9341503 9341859 -110942453 - ORR1D1 LTR MaLR 0 374 1 7 656 194 282 60 9 chr13 9342402 9342492 -110941820 - MIRb SINE MIR -35 233 136 7 656 225 0 0 0 chr13 9343245 9343270 -110941042 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 7 656 417 203 26 0 chr13 9343989 9344074 -110940238 - B1_Mur2 SINE Alu -20 129 43 7 656 3641 64 41 11 chr13 9344726 9345187 -110939125 - MT2C_Mm LTR ERVL 0 475 1 7 656 260 246 0 16 chr13 9345505 9345567 -110938745 - ORR1D1 LTR MaLR -309 65 5 7 656 1857 167 48 51 chr13 9347026 9347399 -110936913 + ORR1D1 LTR MaLR 1 372 -2 7 656 1414 67 51 0 chr13 9347468 9347646 -110936666 + B2_Mm2 SINE B2 2 188 -7 7 656 459 0 0 0 chr13 9347919 9347970 -110936342 + (TTA)n Simple_repeat Simple_repeat 2 52 0 7 656 383 255 89 30 chr13 9348219 9348320 -110935992 + B4 SINE B4 46 152 -140 7 656 261 0 0 0 chr13 9348593 9348622 -110935690 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 656 225 0 0 0 chr13 9349298 9349323 -110934989 + (T)n Simple_repeat Simple_repeat 1 25 0 7 656 620 269 83 0 chr13 9349329 9349474 -110934838 + B4 SINE B4 83 239 -53 7 656 727 221 104 6 chr13 9350724 9350897 -110933415 - B3 SINE B2 -9 207 18 7 656 1619 42 0 63 chr13 9352628 9352833 -110931479 - B2_Mm1t SINE B2 0 193 2 7 656 336 24 0 0 chr13 9353560 9353601 -110930711 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 656 476 238 28 28 chr13 9355226 9355334 -110928978 - ID_B1 SINE B4 -20 204 97 7 656 7876 61 9 0 chr13 9356027 9357050 -110927262 - L1_Mus1 LINE L1 -2 6565 5534 7 656 2736 78 6 0 chr13 9357042 9357400 -110926912 + L1_Mus1 LINE L1 5181 5540 -343 7 656 559 298 194 14 chr13 9358283 9358711 -110925601 + MLT1D LTR MaLR 1 505 0 7 656 1560 54 27 0 chr13 9359190 9359376 -110924936 - B2_Mm1a SINE B2 -1 192 2 7 656 468 240 54 31 chr13 9359729 9359858 -110924454 - MLT1A0 LTR MaLR -2 363 232 7 656 358 291 220 6 chr13 9359877 9360036 -110924276 - MLT1A0 LTR MaLR -197 211 19 7 656 313 292 82 10 chr13 9360322 9360419 -110923893 + PB1D10 SINE Alu 2 105 -12 7 656 546 277 199 8 chr13 9360527 9360898 -110923414 + MER92B LTR ERV1 191 632 -4 7 656 180 0 0 0 chr13 9361508 9361528 -110922784 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 656 983 307 139 45 chr13 9362371 9362838 -110921474 - MLT2B1 LTR ERVL 0 520 10 7 656 500 304 14 36 chr13 9363153 9363293 -110921019 - ID_B1 SINE B4 -2 222 86 7 656 1120 206 24 19 chr13 9363510 9363718 -110920594 - B3 SINE B2 -7 209 1 7 656 706 166 7 14 chr13 9363741 9363888 -110920424 + CT-rich Low_complexity Low_complexity 2 147 0 7 656 354 23 0 0 chr13 9363890 9363933 -110920379 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 7 656 719 293 23 68 chr13 9363953 9364173 -110920139 - ID_B1 SINE B4 -1 223 14 7 656 2251 97 5 96 chr13 9364173 9364426 -110919886 + RLTR15 LTR ERVK 1 235 -124 7 656 1285 54 0 0 chr13 9364426 9364574 -110919738 - B1_Mus1 SINE Alu 0 148 1 7 656 2251 97 5 96 chr13 9364574 9364706 -110919606 + RLTR15 LTR ERVK 236 351 -8 7 656 2992 149 14 37 chr13 9365208 9365716 -110918596 + Lx4A LINE L1 6562 7057 -1 7 656 306 329 174 0 chr13 9366394 9366549 -110917763 - B4 SINE B4 -2 290 109 7 656 219 283 0 0 chr13 9366509 9366562 -110917750 - PB1D9 SINE Alu -57 63 11 7 656 378 246 0 0 chr13 9366561 9366630 -110917682 - ID_B1 SINE B4 -22 202 134 7 656 228 270 102 74 chr13 9367121 9367229 -110917083 + MT2B LTR ERVL 149 259 -342 7 656 521 259 134 0 chr13 9367141 9367253 -110917059 + ID_B1 SINE B4 82 208 -16 7 656 244 322 38 113 chr13 9367253 9367274 -110917038 + B1_Mm SINE Alu 1 123 -24 7 656 1068 246 115 51 chr13 9369328 9369684 -110914628 - MTEa LTR MaLR 0 379 1 7 656 778 273 131 8 chr13 9370260 9370504 -110913808 - B4A SINE B4 -14 278 5 7 656 397 194 0 53 chr13 9371267 9371343 -110912969 + B2_Mm2 SINE B2 3 74 -121 7 656 186 103 0 0 chr13 9372110 9372139 -110912173 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 7 656 1260 54 0 13 chr13 9372145 9372294 -110912018 - B1_Mus1 SINE Alu -1 147 1 7 656 1151 57 43 0 chr13 9373260 9373401 -110910911 + B1_Mus2 SINE Alu 1 147 0 7 656 261 0 0 0 chr13 9373401 9373430 -110910882 + (A)n Simple_repeat Simple_repeat 1 29 0 7 656 225 0 0 0 chr13 9373640 9373665 -110910647 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 656 630 235 173 12 chr13 9375409 9375577 -110908735 - B3 SINE B2 -15 201 7 7 656 232 171 0 24 chr13 9375713 9375755 -110908557 - B3 SINE B2 -107 109 69 7 656 2385 135 19 3 chr13 9377882 9378253 -110906059 - ORR1C2 LTR MaLR -7 377 1 7 656 1723 192 85 58 chr13 9378510 9378874 -110905438 + ORR1D1 LTR MaLR 1 374 0 7 656 239 244 121 12 chr13 9379750 9379833 -110904479 + ORR1E LTR MaLR 96 187 -172 7 656 205 310 35 0 chr13 9383340 9383398 -110900914 + MIR3 SINE MIR 95 154 -54 7 656 232 282 153 14 chr13 9383562 9383634 -110900678 + ID2 SINE ID 2 83 0 7 656 379 173 111 0 chr13 9384720 9384801 -110899511 + B1_Mus2 SINE Alu 2 91 -56 7 656 217 289 7 174 chr13 9384835 9384973 -110899339 - PB1D9 SINE Alu -1 119 5 7 656 189 0 0 0 chr13 9386401 9386422 -110897890 + (T)n Simple_repeat Simple_repeat 1 21 0 7 656 1390 204 116 35 chr13 9387478 9387824 -110896488 - ORR1D1 LTR MaLR 0 374 1 7 656 330 91 0 0 chr13 9389020 9389075 -110895237 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 656 383 0 21 0 chr13 9390029 9390076 -110894236 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 656 303 96 0 0 chr13 9390133 9390185 -110894127 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 656 1763 254 42 20 chr13 9390197 9390356 -110893956 - MT2A LTR ERVL -69 464 300 7 656 1259 54 0 0 chr13 9390356 9390504 -110893808 + B1_Mus1 SINE Alu 1 148 0 7 656 1763 254 42 20 chr13 9390504 9390798 -110893514 - MT2A LTR ERVL -234 299 2 7 656 500 263 71 13 chr13 9391694 9391848 -110892464 + MTC LTR MaLR 1 163 -258 7 656 359 311 74 11 chr13 9392042 9392220 -110892092 + MTC LTR MaLR 237 405 -14 7 656 183 129 0 0 chr13 9392243 9392274 -110892038 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 7 656 270 0 0 0 chr13 9392412 9392442 -110891870 + (A)n Simple_repeat Simple_repeat 1 30 0 7 656 275 291 5 16 chr13 9392563 9392639 -110891673 - PB1D10 SINE Alu -13 136 45 7 656 195 69 0 0 chr13 9393284 9393313 -110890999 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 7 656 1268 47 0 20 chr13 9393325 9393476 -110890836 + B1_Mus1 SINE Alu 1 148 0 8 656 258 269 51 0 chr13 9394048 9394126 -110890186 + PB1D10 SINE Alu 9 90 -27 8 656 935 186 84 34 chr13 9397430 9397629 -110886683 - RMER17C LTR ERVK -9 401 194 8 656 1284 89 0 0 chr13 9397629 9397809 -110886503 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 8 656 297 0 0 0 chr13 9397816 9397849 -110886463 + (CAGTG)n Simple_repeat Simple_repeat 4 36 0 8 656 935 219 84 26 chr13 9397849 9397974 -110886338 - RMER17C LTR ERVK -225 185 1 8 656 13611 94 48 5 chr13 9399114 9401712 -110882600 - L1Md_F LINE L1 -627 3190 478 8 656 237 244 93 113 chr13 9401714 9401908 -110882404 + RMER21A LTR ERV1 750 939 -8 8 656 670 126 0 0 chr13 9401910 9402013 -110882299 - L1Md_F LINE L1 -6036 483 381 8 656 5618 92 70 30 chr13 9402012 9403049 -110881263 - L1VL2 LINE L1 -2412 1203 112 8 656 24 67 0 0 chr13 9403145 9403190 -110881122 + AT_rich Low_complexity Low_complexity 1 45 0 8 656 1695 42 0 0 chr13 9403587 9403778 -110880534 - B2_Mm1a SINE B2 -2 191 1 8 656 1306 34 0 0 chr13 9403789 9403935 -110880377 - B1_Mm SINE Alu 0 147 2 8 656 249 239 0 130 chr13 9404379 9404456 -110879856 - ID4 SINE ID -15 68 2 8 656 247 350 52 0 chr13 9404485 9404582 -110879730 + ID_B1 SINE B4 75 176 -48 8 656 446 245 37 9 chr13 9404497 9404604 -110879708 + PB1D10 SINE Alu 7 116 -1 8 656 252 298 148 8 chr13 9405307 9405429 -110878883 - B1F SINE Alu -8 141 3 8 656 241 290 94 51 chr13 9405431 9405569 -110878743 - MIR SINE MIR -114 148 5 8 656 473 299 163 50 chr13 9405712 9406133 -110878179 - Cheshire DNA MER1_type -1128 1292 824 8 656 815 314 60 81 chr13 9406133 9406431 -110877881 + B4A SINE B4 1 292 0 8 656 234 91 0 0 chr13 9406579 9406612 -110877700 + (TATG)n Simple_repeat Simple_repeat 2 34 0 8 656 238 320 102 23 chr13 9406634 9406810 -110877502 - Cheshire DNA MER1_type -1770 650 461 8 656 328 217 102 102 chr13 9407003 9407131 -110877181 - MER58D DNA MER1_type -254 132 5 8 656 30 0 0 0 chr13 9407263 9407293 -110877019 + AT_rich Low_complexity Low_complexity 1 30 0 8 656 3422 41 8 5 chr13 9409261 9409656 -110874656 + MTA_Mm LTR MaLR 1 396 0 8 656 7937 80 17 70 chr13 9409656 9410815 -110873497 + MTA_Mm-int LTR MaLR 1 1098 0 8 656 3298 52 21 0 chr13 9410815 9411203 -110873109 + MTA_Mm LTR MaLR 1 396 0 8 656 1196 61 0 7 chr13 9412055 9412203 -110872109 - B1_Mus1 SINE Alu 0 148 2 8 656 421 301 169 35 chr13 9413473 9413728 -110870584 - B4 SINE B4 -1 291 3 8 656 1406 254 18 91 chr13 9414254 9414639 -110869673 + ORR1D2 LTR MaLR 1 357 -13 8 656 190 227 255 64 chr13 9415956 9416050 -110868262 - MIRm SINE MIR -11 265 154 8 656 333 0 0 0 chr13 9416276 9416313 -110867999 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 656 367 296 284 16 chr13 9416566 9416820 -110867492 - MLT1F1 LTR MaLR -122 447 126 8 656 213 121 0 0 chr13 9418118 9418151 -110866161 + (T)n Simple_repeat Simple_repeat 1 33 0 8 656 526 272 18 0 chr13 9418202 9418316 -110865996 - PB1D10 SINE Alu -1 116 1 8 656 277 318 58 12 chr13 9419068 9419154 -110865158 + B4 SINE B4 55 144 -148 8 656 366 23 0 0 chr13 9420142 9420185 -110864127 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 656 520 226 84 9 chr13 9420245 9420352 -110863960 - ID_B1 SINE B4 -46 178 64 8 656 2152 147 62 39 chr13 9420549 9420938 -110863374 + RMER10B LTR ERVL 1 398 0 8 656 270 229 36 12 chr13 9421321 9421405 -110862907 + LTR40c LTR ERVL 327 412 -53 8 656 220 296 104 29 chr13 9422656 9422844 -110861468 + L2b LINE L2 3202 3356 -70 8 656 273 163 20 0 chr13 9423060 9423109 -110861203 - ID_B1 SINE B4 0 224 175 8 656 269 180 62 47 chr13 9423109 9423124 -110861188 - PB1D10 SINE Alu 0 117 53 8 656 540 292 27 14 chr13 9423638 9423784 -110860528 + B1_Mur2 SINE Alu 2 149 0 8 656 3389 56 5 0 chr13 9423925 9424319 -110859993 + MTA_Mm LTR MaLR 1 396 0 8 656 189 0 0 0 chr13 9424421 9424442 -110859870 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 8 656 271 148 59 103 chr13 9424725 9424793 -110859519 + PB1D10 SINE Alu 53 117 0 8 656 213 65 0 0 chr13 9424820 9424851 -110859461 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 656 1244 85 0 6 chr13 9425064 9425230 -110859082 - B2_Mm2 SINE B2 -29 166 2 8 656 293 0 27 0 chr13 9425255 9425292 -110859020 + (TTG)n Simple_repeat Simple_repeat 2 39 0 8 656 240 347 32 0 chr13 9425368 9425463 -110858849 - MER5A1 DNA MER1_type -48 118 21 8 656 252 281 48 40 chr13 9426123 9426249 -110858063 - MLT1J LTR MaLR -313 199 73 8 656 220 299 156 7 chr13 9427387 9427522 -110856790 - L3 LINE CR1 -198 4291 4137 8 656 1066 256 49 29 chr13 9430387 9430693 -110853619 - MTE2a LTR MaLR 0 379 68 8 656 271 315 184 39 chr13 9431025 9431316 -110852996 + Charlie1a DNA MER1_type 169 501 -954 8 656 641 325 92 25 chr13 9431468 9431904 -110852408 + Charlie1a DNA MER1_type 711 1175 -280 8 656 3170 20 42 3 chr13 9431904 9432257 -110852055 - IAPLTR1_Mm LTR ERVK 0 367 1 8 10 55976 29 14 2 chr13 9432257 9438785 -110845527 - IAPEz-int LTR ERVK 0 6481 3 8 657 3170 20 42 3 chr13 9438787 9439140 -110845172 - IAPLTR1_Mm LTR ERVK 0 367 1 8 657 483 382 0 27 chr13 9439358 9439506 -110844806 - RSINE1 SINE B4 -12 153 10 8 657 227 297 44 26 chr13 9439548 9439662 -110844650 + Charlie1a DNA MER1_type 1339 1454 -1 8 657 358 261 88 40 chr13 9440016 9440164 -110844148 - MER77 LTR ERVL -3 604 450 8 657 434 393 81 4 chr13 9440189 9440424 -110843888 - MER77 LTR ERVL -206 401 149 8 657 225 298 121 24 chr13 9440559 9440724 -110843588 + L1M4 LINE L1 4657 4837 -1309 8 657 855 146 0 0 chr13 9440750 9440894 -110843418 + (TTTC)n Simple_repeat Simple_repeat 1 144 0 8 657 423 306 87 46 chr13 9440939 9441134 -110843178 + B4A SINE B4 5 207 -85 8 657 604 219 79 0 chr13 9441326 9441440 -110842872 + B3A SINE B2 2 124 -74 8 657 1828 205 82 28 chr13 9441486 9441878 -110842434 - MTC LTR MaLR -8 413 1 8 657 256 309 0 0 chr13 9441983 9442064 -110842248 + L1M4 LINE L1 5211 5291 -855 8 657 284 238 107 38 chr13 9442076 9442207 -110842105 - L1M4 LINE L1 -725 5453 5314 8 657 273 279 9 35 chr13 9442209 9442324 -110841988 - Lx8 LINE L1 0 7473 7362 8 657 1028 267 8 12 chr13 9442365 9442623 -110841689 - Lx8 LINE L1 -207 7266 7010 8 657 890 173 36 0 chr13 9442645 9442784 -110841528 - B1_Mur4 SINE Alu -6 144 1 8 657 735 217 72 7 chr13 9442805 9442944 -110841368 - B1_Mur4 SINE Alu -2 148 1 8 657 423 160 0 0 chr13 9443102 9443177 -110841135 + (TG)n Simple_repeat Simple_repeat 2 76 0 8 657 559 326 36 23 chr13 9443177 9443485 -110840827 - Lx9 LINE L1 -126 7518 7207 8 657 234 319 0 21 chr13 9443647 9443740 -110840572 - Lx9 LINE L1 -1676 5968 5878 8 657 1260 172 112 9 chr13 9443796 9444081 -110840231 + Lx9 LINE L1 5557 5905 -1739 8 657 1002 192 143 4 chr13 9444059 9444331 -110839981 - Lx8 LINE L1 -441 7032 6723 8 657 289 303 0 14 chr13 9444343 9444429 -110839883 - ID4 SINE ID -58 94 10 8 657 831 289 48 26 chr13 9445140 9445410 -110838902 + B4 SINE B4 4 279 -13 8 657 441 0 0 0 chr13 9445531 9445580 -110838732 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 8 657 207 292 22 33 chr13 9445801 9445893 -110838419 - MIR SINE MIR -140 122 32 8 657 274 232 73 0 chr13 9446455 9446537 -110837775 - L1MB3 LINE L1 -46 6137 6050 8 657 21 0 0 0 chr13 9446947 9446968 -110837344 + AT_rich Low_complexity Low_complexity 1 21 0 8 657 474 299 67 20 chr13 9447189 9447339 -110836973 + ID_B1 SINE B4 8 164 -60 8 657 324 0 0 0 chr13 9447379 9447415 -110836897 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 8 657 1126 58 0 0 chr13 9447415 9447552 -110836760 - B1_Mus2 SINE Alu -10 137 1 8 657 180 0 0 0 chr13 9447701 9447721 -110836591 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 8 657 250 222 74 0 chr13 9447783 9447837 -110836475 - ID_B1 SINE B4 -37 187 130 8 657 281 161 152 0 chr13 9447837 9447869 -110836443 - PB1D10 SINE Alu -26 98 5 8 657 305 360 47 61 chr13 9448873 9449021 -110835291 - B4A SINE B4 -126 166 21 8 657 237 338 0 56 chr13 9448958 9449030 -110835282 - ID2 SINE ID -4 79 12 8 657 244 232 86 14 chr13 9450209 9450279 -110834033 - PB1D7 SINE Alu -49 100 26 8 657 180 0 0 0 chr13 9452107 9452127 -110832185 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 8 657 26 50 0 0 chr13 9452233 9452273 -110832039 + AT_rich Low_complexity Low_complexity 1 40 0 8 657 408 20 0 0 chr13 9452768 9452817 -110831495 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 657 521 264 42 21 chr13 9452827 9452970 -110831342 - B3 SINE B2 -54 162 17 8 657 767 256 73 10 chr13 9452980 9453185 -110831127 - B4A SINE B4 -46 246 29 8 657 1243 89 17 6 chr13 9454511 9454692 -110829620 - L1Md_F2 LINE L1 -3 6579 6397 8 657 253 303 136 13 chr13 9456085 9456239 -110828073 + L1MC1 LINE L1 5925 6097 -236 8 657 373 321 83 129 chr13 9456253 9456603 -110827709 - ORR1E LTR MaLR -6 353 20 8 657 455 325 139 10 chr13 9456648 9456856 -110827456 - RMER15 LTR ERVL -16 559 325 8 657 368 279 81 0 chr13 9457053 9457225 -110827087 + L1MC1 LINE L1 6130 6315 -18 8 657 31 0 0 0 chr13 9457565 9457596 -110826716 + AT_rich Low_complexity Low_complexity 1 31 0 8 657 1115 52 0 0 chr13 9457903 9458039 -110826273 + B1_Mus2 SINE Alu 1 136 -11 8 657 860 95 0 0 chr13 9458363 9458479 -110825833 - B1_Mm SINE Alu -22 125 10 8 657 207 0 0 0 chr13 9458490 9458513 -110825799 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 8 657 780 111 0 0 chr13 9458595 9458712 -110825600 + (TCCC)n Simple_repeat Simple_repeat 2 118 0 8 657 459 0 0 0 chr13 9458990 9459041 -110825271 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 8 657 1026 75 62 0 chr13 9459042 9459188 -110825124 - B2_Mm1a SINE B2 -38 155 1 8 657 210 37 0 0 chr13 9459246 9459273 -110825039 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 657 3673 54 15 0 chr13 9459457 9459918 -110824394 - L1_Mus2 LINE L1 0 6566 6099 8 657 183 129 0 0 chr13 9460126 9460157 -110824155 + (A)n Simple_repeat Simple_repeat 1 31 0 8 657 186 341 33 56 chr13 9460934 9461024 -110823288 - L2b LINE L2 -61 3314 3227 9 657 762 285 109 19 chr13 9461913 9462178 -110822134 + B4A SINE B4 4 292 0 9 657 1576 213 51 37 chr13 9462663 9463018 -110821294 + ORR1D2 LTR MaLR 11 370 0 9 657 249 327 95 9 chr13 9463029 9463134 -110821178 - MLT1A0 LTR MaLR -250 115 2 9 657 368 88 18 0 chr13 9465189 9465246 -110819066 + (TG)n Simple_repeat Simple_repeat 2 59 0 9 657 433 282 27 18 chr13 9465287 9465399 -110818913 - B1F SINE Alu -32 117 5 9 657 360 0 0 0 chr13 9466770 9466810 -110817502 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 657 721 265 110 20 chr13 9467091 9467391 -110816921 - RMER5 LTR ERV1 -135 399 73 9 657 220 53 53 0 chr13 9468143 9468181 -110816131 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 9 657 465 302 62 0 chr13 9471385 9471514 -110812798 - RSINE1 SINE B4 -24 141 5 9 657 397 229 15 45 chr13 9472186 9472387 -110811925 + RMER17C LTR ERVK 80 274 -136 9 657 411 294 167 11 chr13 9472564 9472846 -110811466 + L1MC3 LINE L1 5647 5972 -1813 9 657 503 79 26 0 chr13 9473128 9473204 -110811108 + (AGGGGG)n Simple_repeat Simple_repeat 6 83 0 9 657 701 176 0 7 chr13 9473523 9473666 -110810646 + (TA)n Simple_repeat Simple_repeat 2 143 0 9 657 2438 211 43 96 chr13 9473892 9474589 -110809723 - RLTR25A LTR ERVK 0 1103 444 9 657 282 278 0 67 chr13 9474521 9474625 -110809687 - ORR1A3-int LTR MaLR -1398 565 469 9 657 16982 52 2 1 chr13 9474625 9477512 -110806800 - L1Md_F2 LINE L1 -47 6535 3644 9 657 2137 138 86 75 chr13 9477512 9477831 -110806481 - RLTR25B LTR ERVK -577 451 131 9 657 387 0 0 0 chr13 9477831 9477874 -110806438 + (TA)n Simple_repeat Simple_repeat 2 44 0 9 657 2137 138 86 75 chr13 9477874 9477994 -110806318 - RLTR25B LTR ERVK -898 130 7 9 657 1082 29 73 0 chr13 9478939 9479075 -110805237 - B1_Mm SINE Alu 0 147 2 9 657 585 320 57 67 chr13 9479161 9479355 -110804957 - B3A SINE B2 -3 192 1 9 657 575 264 107 73 chr13 9479552 9479968 -110804344 - L1MD LINE L1 -1252 4894 4455 9 657 216 0 0 0 chr13 9479968 9479992 -110804320 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 657 575 264 107 73 chr13 9479992 9480077 -110804235 - L1MD LINE L1 -1692 4454 4387 9 657 596 223 115 35 chr13 9480077 9480277 -110804035 - B3 SINE B2 0 216 1 9 657 575 264 107 73 chr13 9480277 9480420 -110803892 - L1MD LINE L1 -1760 4386 4228 9 657 237 308 0 0 chr13 9480708 9480760 -110803552 + B4A SINE B4 108 159 -133 9 657 221 357 40 30 chr13 9480760 9480809 -110803503 + B1F2 SINE Alu 23 124 -25 9 657 837 226 23 50 chr13 9482585 9482804 -110801508 - B3 SINE B2 -2 214 2 9 657 253 259 0 0 chr13 9483129 9483187 -110801125 - Lx9 LINE L1 -449 7195 7138 9 657 816 226 75 62 chr13 9483406 9483647 -110800665 - Lx9 LINE L1 -516 7128 6885 9 657 750 219 180 0 chr13 9483664 9483842 -110800470 - B3 SINE B2 -5 211 2 9 657 419 293 167 0 chr13 9484066 9484240 -110800072 + B4A SINE B4 90 292 0 9 657 206 193 18 0 chr13 9484272 9484329 -110799983 + (CA)n Simple_repeat Simple_repeat 2 59 0 9 657 360 0 0 0 chr13 9484886 9484926 -110799386 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 657 249 207 0 17 chr13 9485660 9485719 -110798593 + (TG)n Simple_repeat Simple_repeat 2 59 0 9 657 254 288 29 29 chr13 9485944 9486012 -110798300 - B4A SINE B4 -224 68 1 9 657 398 239 34 34 chr13 9486918 9487035 -110797277 - PB1D10 SINE Alu 0 117 1 9 657 302 0 26 0 chr13 9487048 9487086 -110797226 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 9 657 589 198 33 2 chr13 9487144 9487275 -110797037 - B1_Mus1 SINE Alu -5 144 7 9 657 918 169 204 0 chr13 9487467 9487639 -110796673 - B3 SINE B2 -6 210 4 9 657 234 0 0 0 chr13 9488204 9488230 -110796082 + (T)n Simple_repeat Simple_repeat 1 26 0 9 657 1063 75 14 0 chr13 9488230 9488376 -110795936 - B1_Mus1 SINE Alu 0 148 1 9 657 456 128 0 0 chr13 9489782 9489860 -110794452 + (TG)n Simple_repeat Simple_repeat 2 79 0 9 657 23 0 0 0 chr13 9491418 9491441 -110792871 + AT_rich Low_complexity Low_complexity 1 23 0 9 657 294 29 0 0 chr13 9491500 9491535 -110792777 + (TG)n Simple_repeat Simple_repeat 1 35 0 9 657 324 0 0 0 chr13 9492117 9492153 -110792159 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 657 184 29 114 0 chr13 9492606 9492641 -110791671 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 9 657 1167 62 7 0 chr13 9492646 9492792 -110791520 - B1_Mus1 SINE Alu 0 148 2 9 657 354 243 14 0 chr13 9494943 9495017 -110789295 + ID4 SINE ID 8 82 -1 9 657 1429 195 78 62 chr13 9495353 9495724 -110788588 - ORR1C2 LTR MaLR -7 377 1 9 657 868 158 52 17 chr13 9495875 9496049 -110788263 - B2_Mm2 SINE B2 -14 181 2 9 657 3306 42 7 0 chr13 9498996 9499399 -110784913 - L1_Mus1 LINE L1 0 6567 6162 9 657 1761 97 39 0 chr13 9499399 9499678 -110784634 + L1_Mus1 LINE L1 5867 6156 -410 9 657 223 320 27 0 chr13 9499918 9499993 -110784319 + ID2 SINE ID 7 83 0 9 657 6812 94 22 16 chr13 9501058 9502451 -110781861 + Lx LINE L1 5251 6654 0 1 657 185 371 11 22 chr13 9502612 9502703 -110781609 + MIR SINE MIR 84 173 -89 2 657 664 188 11 68 chr13 9503851 9504028 -110780284 + RMER1C Other Other 1059 1225 -117 3 657 632 190 14 14 chr13 9504028 9504172 -110780140 + RMER1C Other Other 1198 1341 -1 3 657 552 77 0 11 chr13 9504404 9504496 -110779816 + L1Md_F2 LINE L1 6492 6582 0 4 657 1221 54 0 0 chr13 9505098 9505245 -110779067 - B1_Mus2 SINE Alu 0 147 1 5 657 2252 142 11 6 chr13 9506212 9506567 -110777745 - ORR1B2 LTR MaLR -8 359 3 6 657 22 0 0 0 chr13 9506696 9506718 -110777594 + AT_rich Low_complexity Low_complexity 1 22 0 7 657 195 42 0 0 chr13 9507306 9507330 -110776982 + (TGG)n Simple_repeat Simple_repeat 1 24 0 8 657 330 288 70 35 chr13 9507964 9508079 -110776233 - RSINE1 SINE B4 -44 121 3 9 657 187 286 70 14 chr13 9508407 9508478 -110775834 - L2c LINE L2 -22 3365 3291 1 657 420 288 102 25 chr13 9509160 9509356 -110774956 + L1MC LINE L1 2960 3170 -2976 1 657 302 251 65 29 chr13 9509587 9509770 -110774542 - Lx9 LINE L1 -297 7347 7122 1 657 411 253 218 28 chr13 9510023 9510446 -110773866 + L1MC1 LINE L1 1925 2427 -4081 1 657 7703 42 2 0 chr13 9510709 9512070 -110772242 - L1Md_F2 LINE L1 0 6582 5219 1 657 476 325 56 0 chr13 9512193 9512319 -110771993 + RSINE1 SINE B4 16 148 -17 1 657 522 288 189 44 chr13 9512730 9513786 -110770526 + L1MC1 LINE L1 5059 6265 -243 1 657 1188 61 0 0 chr13 9514138 9514285 -110770027 + B1_Mus1 SINE Alu 2 148 0 1 657 357 291 87 0 chr13 9514868 9514971 -110769341 + PB1D7 SINE Alu 1 112 -8 1 657 1080 278 48 50 chr13 9516919 9517298 -110767014 - MTEa LTR MaLR 0 379 2 1 657 252 83 0 0 chr13 9517619 9517655 -110766657 - B1_Mm SINE Alu 0 147 112 1 657 994 86 7 14 chr13 9517983 9518124 -110766188 + B1_Mus2 SINE Alu 1 140 -7 2 657 252 184 0 0 chr13 9518126 9518175 -110766137 + A-rich Low_complexity Low_complexity 1 49 0 2 657 508 310 26 6 chr13 9518208 9518364 -110765948 - RSINE1 SINE B4 -2 163 5 2 657 21 82 0 0 chr13 9518364 9518413 -110765899 + AT_rich Low_complexity Low_complexity 1 49 0 2 657 21673 71 4 151 chr13 9518543 9523829 -110760483 - L1Md_F2 LINE L1 -12 6570 2120 2 657 20312 50 1 1 chr13 9523824 9527218 -110757094 - L1Md_F3 LINE L1 -11 6573 3180 2 657 6161 98 5 13 chr13 9527218 9528887 -110755425 - L1Md_F3 LINE L1 -3749 2134 480 2 657 388 133 13 0 chr13 9528887 9528962 -110755350 - L1VL1 LINE L1 -6156 266 191 2 657 292 308 58 39 chr13 9529831 9529973 -110754339 - B1F SINE Alu -1 148 1 2 657 415 293 65 22 chr13 9530287 9530472 -110753840 + L1MC4 LINE L1 7691 7883 -159 2 657 288 169 0 48 chr13 9530633 9530695 -110753617 + B1_Mm SINE Alu 89 147 0 2 657 1759 154 115 12 chr13 9530697 9531018 -110753294 + MTC LTR MaLR 68 421 0 3 657 790 230 71 1 chr13 9531018 9531268 -110753044 + Lx7 LINE L1 6610 6905 -555 3 657 1734 215 99 48 chr13 9531245 9531694 -110752618 + Lx7 LINE L1 7132 7601 -95 3 657 288 0 0 0 chr13 9531694 9531726 -110752586 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 657 1734 215 99 48 chr13 9531726 9531813 -110752499 + Lx7 LINE L1 7602 7695 -1 3 657 28 48 0 0 chr13 9531836 9531878 -110752434 + AT_rich Low_complexity Low_complexity 1 42 0 3 657 298 312 12 0 chr13 9531976 9532056 -110752256 + ID4_ SINE ID 3 83 0 3 657 204 40 0 0 chr13 9532949 9532974 -110751338 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 657 375 23 0 0 chr13 9532974 9533017 -110751295 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 657 386 279 41 81 chr13 9533042 9533324 -110750988 - L1MA4 LINE L1 -376 5924 5571 3 657 395 289 133 7 chr13 9533690 9533840 -110750472 - MER58A DNA MER1_type -36 188 20 3 657 668 293 102 43 chr13 9534244 9534754 -110749558 - L1M4 LINE L1 -1888 4258 3719 3 657 612 278 5 62 chr13 9536636 9536828 -110747484 + B3A SINE B2 12 192 -6 4 657 247 265 15 0 chr13 9538834 9538902 -110745410 - ID4 SINE ID -13 70 2 4 657 716 289 54 5 chr13 9539530 9539735 -110744577 + B4A SINE B4 2 216 -76 4 657 864 260 76 100 chr13 9539746 9540164 -110744148 - MT2A LTR ERVL -59 542 1 4 657 245 247 154 13 chr13 9540164 9540241 -110744071 + B4A SINE B4 205 292 0 4 657 259 265 74 23 chr13 9540605 9540720 -110743592 - MER58C DNA MER1_type -6 209 132 4 657 1204 61 0 0 chr13 9542075 9542222 -110742090 + B1_Mus2 SINE Alu 1 147 0 4 657 267 104 0 0 chr13 9542225 9542273 -110742039 + (A)n Simple_repeat Simple_repeat 1 48 0 4 657 213 149 21 0 chr13 9542590 9542637 -110741675 + T-rich Low_complexity Low_complexity 2 49 0 4 657 1116 103 0 0 chr13 9543317 9543463 -110740849 + B1_Mus2 SINE Alu 1 146 -1 4 657 285 100 0 0 chr13 9543464 9543514 -110740798 + (A)n Simple_repeat Simple_repeat 1 50 0 4 657 826 301 91 28 chr13 9543811 9544064 -110740248 + B4A SINE B4 2 270 -22 5 657 1285 235 153 8 chr13 9544484 9544851 -110739461 - MTD LTR MaLR -14 405 2 5 657 261 0 0 0 chr13 9545123 9545152 -110739160 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 657 476 308 51 72 chr13 9545448 9545729 -110738583 - MLT1B LTR MaLR -16 451 164 5 657 471 285 65 7 chr13 9545729 9545867 -110738445 - RSINE1 SINE B4 -16 149 4 5 657 375 275 2 118 chr13 9545867 9546016 -110738296 - MLT1B LTR MaLR -286 181 46 5 657 350 316 52 17 chr13 9546581 9546697 -110737615 - MER82 DNA MER2_type -10 643 524 5 657 2255 78 3 50 chr13 9546874 9547212 -110737100 - RLTRETN_Mm LTR ERVK 0 322 1 5 657 1670 153 79 63 chr13 9547263 9547590 -110736722 + ORR1C2 LTR MaLR 1 344 -40 5 657 1072 119 67 11 chr13 9547590 9547768 -110736544 + B2_Mm2 SINE B2 1 188 -7 5 657 1670 153 79 63 chr13 9547768 9547818 -110736494 + ORR1C2 LTR MaLR 345 384 0 5 657 2380 179 7 14 chr13 9548192 9548616 -110735696 + MTC LTR MaLR 1 421 0 5 657 416 310 56 7 chr13 9548720 9548863 -110735449 - MIR SINE MIR -25 237 88 6 657 413 338 146 31 chr13 9551615 9551876 -110732436 + B4A SINE B4 2 292 0 6 657 6287 67 13 6 chr13 9553041 9553872 -110730440 - L1Md_F2 LINE L1 -9 6573 5737 6 657 712 84 0 98 chr13 9553919 9554051 -110730261 + L1_Mus1 LINE L1 6449 6567 0 6 657 386 231 34 40 chr13 9554055 9554204 -110730108 - Ricksha DNA MuDR -648 2598 2451 6 657 304 307 34 42 chr13 9554223 9554267 -110730045 - ID_B1 SINE B4 -100 124 7 6 657 358 267 0 0 chr13 9554267 9554342 -110729970 - ID4_ SINE ID -2 81 7 6 657 290 288 0 0 chr13 9554357 9554437 -110729875 - Ricksha DNA MuDR -2633 613 534 6 657 245 121 0 49 chr13 9555441 9555502 -110728810 + T-rich Low_complexity Low_complexity 1 58 0 6 657 1182 43 0 0 chr13 9555504 9555644 -110728668 - B1_Mus2 SINE Alu -7 140 1 6 657 3450 28 2 0 chr13 9556739 9557134 -110727178 - MTA_Mm LTR MaLR 0 396 1 6 657 940 259 57 20 chr13 9557139 9557439 -110726873 - Lx8 LINE L1 -20 7453 7143 7 657 243 0 0 0 chr13 9558518 9558545 -110725767 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 7 657 252 256 0 0 chr13 9559592 9559678 -110724634 + CT-rich Low_complexity Low_complexity 2 87 0 7 657 234 0 0 0 chr13 9560837 9560863 -110723449 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 7 657 279 173 0 0 chr13 9561906 9561987 -110722325 + T-rich Low_complexity Low_complexity 1 81 0 7 657 260 326 11 0 chr13 9562172 9562264 -110722048 - PB1D10 SINE Alu -8 109 17 7 657 328 233 69 15 chr13 9562967 9563098 -110721214 - L1M2 LINE L1 -769 5522 5385 7 657 385 344 0 15 chr13 9565366 9565496 -110718816 + CT-rich Low_complexity Low_complexity 3 130 0 7 657 300 70 0 0 chr13 9565633 9565676 -110718636 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 657 357 62 0 0 chr13 9565676 9565724 -110718588 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 657 22 0 0 0 chr13 9566892 9566914 -110717398 + AT_rich Low_complexity Low_complexity 1 22 0 8 657 270 0 0 0 chr13 9566923 9566953 -110717359 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 658 22 56 0 0 chr13 9568954 9568990 -110715322 + AT_rich Low_complexity Low_complexity 1 36 0 8 658 1328 82 11 11 chr13 9569305 9569491 -110714821 - B2_Mm1t SINE B2 -7 186 1 8 658 605 50 25 0 chr13 9569533 9569613 -110714699 - RLTR10 LTR ERVK -308 82 1 8 658 346 331 41 16 chr13 9569908 9570031 -110714281 - B1F1 SINE Alu -20 129 4 8 658 343 281 112 0 chr13 9571456 9571545 -110712767 - PB1 SINE Alu 0 127 29 8 658 959 264 64 95 chr13 9572637 9572895 -110711417 - L1MA5 LINE L1 -223 6077 5819 8 658 2292 22 22 0 chr13 9572895 9573169 -110711143 - L1Md_F2 LINE L1 0 6582 6303 8 658 959 264 64 95 chr13 9573169 9573581 -110710731 - L1MA5 LINE L1 -482 5818 5428 8 658 741 268 102 53 chr13 9573730 9573994 -110710318 - B4A SINE B4 -14 278 2 8 658 1274 27 0 0 chr13 9575139 9575285 -110709027 - B1_Mus1 SINE Alu 0 148 3 9 658 390 250 0 107 chr13 9576231 9576352 -110707960 + MT2B LTR ERVL 151 258 -343 9 658 821 184 7 41 chr13 9576253 9576400 -110707912 + B1_Mur3 SINE Alu 6 147 -2 9 658 614 257 7 33 chr13 9576723 9576876 -110707436 + B1_Mur2 SINE Alu 1 149 0 9 658 764 70 122 0 chr13 9577629 9577744 -110706568 - L1Md_F2 LINE L1 -12 6570 6442 9 658 1036 259 140 12 chr13 9577768 9578104 -110706208 - MTEb LTR MaLR 0 379 1 9 658 402 268 32 89 chr13 9578887 9578945 -110705367 - PB1D10 SINE Alu -1 116 59 9 658 1745 167 75 61 chr13 9578945 9579321 -110704991 - ORR1C2 LTR MaLR 0 384 4 9 658 402 268 32 89 chr13 9579321 9579385 -110704927 - PB1D10 SINE Alu -59 58 1 9 658 763 249 25 83 chr13 9579450 9579691 -110704621 - Lx5 LINE L1 -7 7043 6817 9 658 1566 209 16 6 chr13 9579666 9579988 -110704324 + Lx5 LINE L1 6522 6846 -204 9 658 705 303 24 76 chr13 9580392 9580681 -110703631 + B4A SINE B4 1 274 -18 9 658 299 326 11 0 chr13 9582341 9582430 -110701882 + PB1 SINE Alu 13 102 -25 1 658 978 124 43 0 chr13 9582775 9582936 -110701376 + URR1A DNA MER1_type 59 226 0 1 658 344 237 101 44 chr13 9582794 9582953 -110701359 - CYRA11_Mm Unknown Y-chromosome -297 320 153 1 658 486 0 0 0 chr13 9583449 9583503 -110700809 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 658 468 296 12 54 chr13 9584228 9584396 -110699916 - B4A SINE B4 -10 282 122 1 658 239 333 25 13 chr13 9584558 9584637 -110699675 - ID4_ SINE ID -2 81 2 1 658 354 305 51 51 chr13 9584787 9584925 -110699387 - B1F1 SINE Alu -11 138 1 1 658 994 290 18 32 chr13 9585150 9585435 -110698877 + B4A SINE B4 2 282 -10 1 658 270 0 0 0 chr13 9586187 9586217 -110698095 + (A)n Simple_repeat Simple_repeat 1 30 0 1 658 398 323 142 60 chr13 9587920 9588187 -110696125 - B4A SINE B4 -1 291 3 1 658 239 359 0 0 chr13 9590383 9590489 -110693823 - Lx8 LINE L1 -1567 5906 5801 1 658 1027 133 126 20 chr13 9590771 9590970 -110693342 - URR1A DNA MER1_type 0 226 7 1 658 311 327 106 29 chr13 9591063 9591271 -110693041 - RLTR18 LTR ERVK -362 254 31 1 658 377 216 9 9 chr13 9591282 9591394 -110692918 - L1MA5A LINE L1 -470 5827 5716 1 658 397 276 61 22 chr13 9591886 9592012 -110692300 - MTEb LTR MaLR -6 373 249 1 658 780 262 4 100 chr13 9592058 9592329 -110691983 - MTEb LTR MaLR -132 247 3 1 658 332 344 61 85 chr13 9593468 9593798 -110690514 + MLT1A0 LTR MaLR 44 365 0 1 658 440 348 7 22 chr13 9594033 9594171 -110690141 - ID_B1 SINE B4 -9 215 80 1 658 631 241 76 15 chr13 9594181 9594360 -110689952 - B3 SINE B2 -4 194 6 1 658 24 53 0 0 chr13 9594806 9594844 -110689468 + AT_rich Low_complexity Low_complexity 1 38 0 1 658 1695 161 113 9 chr13 9594996 9595322 -110688990 - ORR1B2 LTR MaLR -7 360 1 1 658 525 244 59 0 chr13 9595468 9595587 -110688725 - ORR1E LTR MaLR -224 135 10 1 658 1537 26 0 0 chr13 9596311 9596537 -110687775 - L1Md_F3 LINE L1 0 6584 6374 1 658 217 314 103 11 chr13 9597324 9597411 -110686901 - PB1D10 SINE Alu -22 95 1 1 658 1679 228 11 26 chr13 9598662 9599013 -110685299 + ORR1E LTR MaLR 3 348 -11 1 658 1469 259 52 6 chr13 9600017 9600363 -110683949 + MTEa LTR MaLR 6 367 -12 1 658 287 216 78 22 chr13 9600365 9600455 -110683857 + MIR SINE MIR 112 206 -56 1 658 1745 197 76 13 chr13 9600763 9601159 -110683153 - MTC LTR MaLR 0 421 1 1 658 976 238 15 0 chr13 9602897 9603099 -110681213 - B3 SINE B2 -7 209 5 1 658 216 86 0 0 chr13 9603104 9603139 -110681173 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 1 658 189 180 0 0 chr13 9603142 9603192 -110681120 + CT-rich Low_complexity Low_complexity 1 50 0 1 658 23 33 0 0 chr13 9603208 9603238 -110681074 + AT_rich Low_complexity Low_complexity 1 30 0 1 658 256 224 13 38 chr13 9604352 9604431 -110679881 + (TG)n Simple_repeat Simple_repeat 1 77 0 1 658 1006 275 112 0 chr13 9605074 9605412 -110678900 - MTEa LTR MaLR -3 376 1 1 658 1914 194 63 25 chr13 9605830 9606227 -110678085 - MTC LTR MaLR -9 412 1 1 658 180 367 12 12 chr13 9606263 9606343 -110677969 + MIR3 SINE MIR 108 187 -21 1 658 807 119 0 0 chr13 9606502 9606628 -110677684 + (TTTC)n Simple_repeat Simple_repeat 3 128 0 1 658 1248 70 0 0 chr13 9606629 9606801 -110677511 + (TTCC)n Simple_repeat Simple_repeat 4 175 0 1 658 974 254 86 32 chr13 9607008 9607104 -110677208 + Lx8 LINE L1 7083 7179 -294 1 658 1032 175 125 0 chr13 9607104 9607304 -110677008 + URR1B DNA MER1_type 1 225 0 1 658 974 254 86 32 chr13 9607304 9607578 -110676734 + Lx8 LINE L1 7180 7472 -1 1 658 300 287 0 90 chr13 9607862 9607973 -110676339 + RMER30 DNA MER1_type 71 171 -31 1 658 1470 252 25 55 chr13 9608730 9608871 -110675441 - Lx7 LINE L1 0 7696 7556 1 658 333 0 0 0 chr13 9608871 9608908 -110675404 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 658 1470 252 25 55 chr13 9608908 9609277 -110675035 - Lx7 LINE L1 -141 7555 7201 1 658 333 269 0 150 chr13 9609340 9609480 -110674832 + PB1D7 SINE Alu 2 120 0 1 658 738 278 72 19 chr13 9609511 9609720 -110674592 + B4 SINE B4 1 220 -72 1 658 726 72 0 0 chr13 9610895 9610992 -110673320 + (TCC)n Simple_repeat Simple_repeat 3 99 0 1 658 210 279 65 16 chr13 9611190 9611252 -110673060 + MIR3 SINE MIR 113 177 -31 1 658 690 316 31 39 chr13 9612140 9612426 -110671886 - B4A SINE B4 -7 285 2 1 658 284 277 21 0 chr13 9612452 9612546 -110671766 + CT-rich Low_complexity Low_complexity 1 96 0 1 658 716 248 18 43 chr13 9612700 9612864 -110671448 + RSINE1 SINE B4 3 162 -3 1 658 25 31 0 0 chr13 9612877 9612909 -110671403 + AT_rich Low_complexity Low_complexity 1 32 0 1 658 22 0 0 0 chr13 9614548 9614570 -110669742 + AT_rich Low_complexity Low_complexity 1 22 0 1 658 508 239 80 91 chr13 9615184 9615359 -110668953 - MTEb LTR MaLR -34 345 173 1 658 226 278 33 141 chr13 9616164 9616256 -110668056 - B3A SINE B2 -116 82 1 1 658 435 328 161 51 chr13 9617801 9618055 -110666257 + B4 SINE B4 1 282 -10 1 658 309 305 98 49 chr13 9618277 9618501 -110665811 - MamRep137 DNA TcMar? -139 305 71 1 658 252 264 13 53 chr13 9619157 9619233 -110665079 - MLT1A1 LTR MaLR -335 73 1 1 658 475 181 186 17 chr13 9620581 9620699 -110663613 - B1F SINE Alu -8 141 4 1 658 329 172 35 0 chr13 9620897 9620955 -110663357 + Lx8 LINE L1 7179 7238 -235 1 658 636 264 136 28 chr13 9622653 9622867 -110661445 - 7SK RNA RNA -87 244 8 1 658 347 282 0 43 chr13 9623496 9623611 -110660701 + BC1_Mm scRNA scRNA 4 113 -39 1 658 250 284 43 60 chr13 9625216 9625332 -110658980 - B1_Mm SINE Alu -2 145 32 1 658 327 232 104 31 chr13 9625351 9625501 -110658811 - HAL1-3A_ME LINE L1 -418 2440 2284 1 658 389 199 35 24 chr13 9625501 9625671 -110658641 + CT-rich Low_complexity Low_complexity 2 173 0 1 658 441 325 24 16 chr13 9626838 9626963 -110657349 + B1F SINE Alu 7 132 -17 1 658 315 289 0 13 chr13 9628034 9628111 -110656201 + ID_B1 SINE B4 91 166 -58 1 658 303 310 0 11 chr13 9628111 9628122 -110656190 + PB1D10 SINE Alu 10 96 -21 1 658 290 290 10 31 chr13 9628118 9628214 -110656098 + ID_B1 SINE B4 130 223 -1 1 658 234 269 0 31 chr13 9628418 9628514 -110655798 + T-rich Low_complexity Low_complexity 3 95 0 1 658 235 304 63 0 chr13 9629089 9629168 -110655144 + RMER12 LTR ERVK 742 825 -497 1 658 1997 134 116 16 chr13 9629632 9630004 -110654308 - RLTR9E LTR ERVK 0 409 1 1 658 691 262 42 31 chr13 9630574 9630767 -110653545 + B3A SINE B2 2 196 -2 1 658 400 308 19 0 chr13 9631167 9631271 -110653041 + PB1D7 SINE Alu 5 110 -10 1 658 249 33 0 0 chr13 9631271 9631301 -110653011 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 658 1284 61 0 0 chr13 9631303 9631451 -110652861 + B1_Mus1 SINE Alu 1 148 0 1 658 186 47 68 23 chr13 9631454 9631498 -110652814 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 1 658 4078 114 35 19 chr13 9631735 9632361 -110651951 + Lx LINE L1 6018 6653 -1 1 658 1000 154 65 16 chr13 9632538 9632723 -110651589 - B2_Mm2 SINE B2 -1 194 1 1 658 422 268 77 30 chr13 9633006 9633175 -110651137 + Lx5 LINE L1 6874 7050 0 1 658 2440 61 29 0 chr13 9633412 9633723 -110650589 + L1_Mus3 LINE L1 6319 6638 0 1 658 276 130 0 0 chr13 9634528 9634574 -110649738 + (T)n Simple_repeat Simple_repeat 1 46 0 1 658 645 249 39 8 chr13 9635771 9635946 -110648366 - B3A SINE B2 -37 179 1 1 658 187 31 0 59 chr13 9636149 9636183 -110648129 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1 658 533 228 118 67 chr13 9636778 9636820 -110647492 + CYRA11_Mm Unknown Y-chromosome 110 164 -453 1 658 1368 130 19 0 chr13 9636820 9637035 -110647277 - URR1A DNA MER1_type 0 226 8 1 658 333 0 0 0 chr13 9637396 9637433 -110646879 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 658 417 267 47 10 chr13 9637701 9637850 -110646462 + L1MA4 LINE L1 5755 5907 -1566 1 658 551 351 51 0 chr13 9638616 9638892 -110645420 + RMER15 LTR ERVL 273 562 -13 1 658 549 256 60 11 chr13 9639280 9639462 -110644850 + ID_B1 SINE B4 1 191 -33 1 658 418 319 84 28 chr13 9640655 9640797 -110643515 + B4 SINE B4 50 199 -93 1 658 502 306 67 0 chr13 9640892 9641026 -110643286 + RSINE1 SINE B4 2 144 -21 1 658 965 171 14 0 chr13 9642082 9642228 -110642084 - B1_Mur2 SINE Alu -1 148 1 1 658 192 320 47 28 chr13 9642786 9642892 -110641420 - MIR SINE MIR -14 248 141 1 658 180 0 0 0 chr13 9643369 9643389 -110640923 + (A)n Simple_repeat Simple_repeat 1 20 0 1 658 343 203 14 0 chr13 9643401 9643470 -110640842 - ID_B1 SINE B4 0 224 155 1 658 4319 4 0 0 chr13 9643550 9644001 -110640311 - L1Md_A LINE L1 0 6582 6132 1 658 680 251 64 6 chr13 9644090 9644262 -110640050 + B3A SINE B2 1 182 -16 1 658 652 186 0 56 chr13 9645228 9645353 -110638959 - PB1D9 SINE Alu -1 119 2 1 658 2109 65 7 5 chr13 9648260 9648574 -110635738 + MT-int LTR MaLR 60 376 -882 1 658 687 256 80 45 chr13 9650413 9650613 -110633699 + ID_B1 SINE B4 2 208 -16 1 658 230 274 10 40 chr13 9651027 9651126 -110633186 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 1 658 3119 53 0 0 chr13 9651447 9651808 -110632504 + L1_Mus1 LINE L1 6207 6567 0 2 658 23 54 0 0 chr13 9651808 9651845 -110632467 + AT_rich Low_complexity Low_complexity 1 37 0 2 658 590 293 45 13 chr13 9652955 9653125 -110631187 + B4 SINE B4 79 272 -20 2 658 351 0 0 0 chr13 9653135 9653174 -110631138 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 658 314 308 39 55 chr13 9654278 9654460 -110629852 - MLT1J LTR MaLR -333 179 1 2 658 841 315 25 29 chr13 9654626 9654901 -110629411 - B4A SINE B4 -18 274 1 2 658 703 90 8 8 chr13 9656999 9657122 -110627190 + (TAGA)n Simple_repeat Simple_repeat 4 126 0 2 658 585 216 51 57 chr13 9657137 9657314 -110626998 - L1MA9 LINE L1 -4 6308 6133 2 658 865 279 44 4 chr13 9657314 9657541 -110626771 - MTE2b LTR MaLR -143 236 1 2 658 721 289 151 25 chr13 9658818 9659056 -110625256 + B4A SINE B4 24 291 -1 2 658 1246 242 16 12 chr13 9659532 9659787 -110624525 + B4A SINE B4 5 260 -32 2 658 34 0 0 0 chr13 9660871 9660905 -110623407 + AT_rich Low_complexity Low_complexity 1 34 0 2 658 695 262 73 26 chr13 9660916 9661108 -110623204 + B4A SINE B4 83 283 -9 2 658 432 0 0 0 chr13 9661118 9661166 -110623146 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 658 207 0 0 0 chr13 9662449 9662472 -110621840 + (T)n Simple_repeat Simple_repeat 1 23 0 2 658 2032 159 79 12 chr13 9663110 9663453 -110620859 - ORR1B2 LTR MaLR -1 366 1 2 658 227 103 26 0 chr13 9665537 9665576 -110618736 + (TTTC)n Simple_repeat Simple_repeat 2 41 0 2 658 23 33 0 0 chr13 9668385 9668415 -110615897 + AT_rich Low_complexity Low_complexity 1 30 0 2 658 207 0 0 0 chr13 9668614 9668637 -110615675 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 658 429 263 0 29 chr13 9668760 9668862 -110615450 + RSINE1 SINE B4 36 134 -31 2 658 324 297 127 10 chr13 9668907 9669074 -110615238 + B4 SINE B4 84 276 -16 2 658 253 326 88 7 chr13 9671254 9671267 -110613045 + B1_Mus1 SINE Alu 2 147 0 2 658 470 213 66 0 chr13 9671267 9671389 -110612923 + ID_B1 SINE B4 95 224 0 2 658 359 248 325 44 chr13 9671655 9671883 -110612429 - B4A SINE B4 0 292 1 2 658 249 290 0 16 chr13 9673249 9673312 -110611000 + ID4 SINE ID 22 83 0 2 658 3870 156 92 0 chr13 9673414 9674089 -110610223 - Lx3C LINE L1 -4 6972 6236 2 658 452 78 16 0 chr13 9674086 9674150 -110610162 - L1_Mm LINE L1 -366 5517 5453 2 658 14154 139 35 12 chr13 9674148 9674436 -110609876 - L1VL4 LINE L1 -2102 3784 3494 2 658 281 64 0 41 chr13 9674436 9674485 -110609827 + (TCTCTG)n Simple_repeat Simple_repeat 4 50 0 2 658 14154 139 35 12 chr13 9674485 9674621 -110609691 - L1VL4 LINE L1 -2393 3493 3345 2 658 414 0 0 0 chr13 9674621 9674667 -110609645 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2 658 14154 141 64 11 chr13 9674667 9677091 -110607221 - L1VL4 LINE L1 -2542 3344 802 2 658 303 71 0 0 chr13 9677694 9677736 -110606576 + (T)n Simple_repeat Simple_repeat 1 42 0 2 658 383 304 26 35 chr13 9677813 9677929 -110606383 - RSINE1 SINE B4 -5 160 46 2 658 288 0 0 0 chr13 9677929 9677961 -110606351 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 658 549 206 5 2 chr13 9677970 9678081 -110606231 - B3A SINE B2 -72 121 8 2 658 473 275 36 0 chr13 9678594 9678732 -110605580 - ID_B1 SINE B4 -52 172 30 2 658 492 278 146 32 chr13 9679142 9679695 -110604617 - L1MB7 LINE L1 -10 6174 5559 2 658 1284 89 0 0 chr13 9679700 9679880 -110604432 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 2 658 198 0 0 0 chr13 9679884 9679906 -110604406 + (TC)n Simple_repeat Simple_repeat 1 22 0 2 658 697 330 15 1 chr13 9679906 9680148 -110604164 - B4 SINE B4 -46 246 2 2 658 993 231 66 8 chr13 9680545 9680802 -110603510 + MTEb LTR MaLR 103 374 -5 2 658 242 286 133 0 chr13 9681056 9681161 -110603151 - L1MB1 LINE L1 -84 6084 5966 2 658 225 0 0 0 chr13 9681769 9681794 -110602518 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 658 299 249 504 0 chr13 9681987 9682128 -110602184 + ID_B1 SINE B4 2 213 -11 2 658 557 216 14 14 chr13 9683797 9683938 -110600374 - B3 SINE B2 0 216 76 2 658 22 56 0 0 chr13 9684331 9684367 -110599945 + AT_rich Low_complexity Low_complexity 1 36 0 2 658 225 0 0 0 chr13 9690669 9690694 -110593618 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 658 348 241 0 37 chr13 9694716 9694798 -110589514 + ID4 SINE ID 5 83 0 2 658 2579 71 16 57 chr13 9697151 9697523 -110586789 + L1_Mus2 LINE L1 6208 6564 -2 2 658 28 29 0 0 chr13 9697572 9697607 -110586705 + AT_rich Low_complexity Low_complexity 1 35 0 2 658 341 203 72 0 chr13 9697714 9697783 -110586529 + PB1D10 SINE Alu 37 110 -7 2 658 5405 34 0 0 chr13 9698369 9698996 -110585316 - L1Md_T LINE L1 0 6582 5956 2 658 23 54 0 0 chr13 9699050 9699087 -110585225 + AT_rich Low_complexity Low_complexity 1 37 0 2 659 426 216 192 0 chr13 9699458 9699583 -110584729 - B1F SINE Alu 0 149 1 2 659 683 207 7 21 chr13 9701788 9701931 -110582381 + B1_Mm SINE Alu 7 147 0 2 659 485 252 0 16 chr13 9702307 9702432 -110581880 - RSINE1 SINE B4 -40 125 3 2 659 616 202 175 55 chr13 9702691 9702874 -110581438 + B3 SINE B2 12 216 0 2 659 524 207 36 9 chr13 9703932 9704044 -110580268 - B3A SINE B2 -80 118 4 2 659 441 0 0 0 chr13 9704239 9704288 -110580024 + (TAA)n Simple_repeat Simple_repeat 1 49 0 2 659 870 107 0 0 chr13 9705217 9705367 -110578945 + (CCTG)n Simple_repeat Simple_repeat 2 151 0 2 659 761 208 0 7 chr13 9705367 9705512 -110578800 - B1_Mus1 SINE Alu -2 146 3 2 659 262 250 36 27 chr13 9708016 9708127 -110576185 - PB1D10 SINE Alu -5 112 1 2 659 35 0 0 0 chr13 9711439 9711474 -110572838 + AT_rich Low_complexity Low_complexity 1 35 0 2 659 449 195 212 0 chr13 9711487 9711605 -110572707 - B1F2 SINE Alu -6 143 1 2 659 375 60 23 45 chr13 9712099 9712187 -110572125 + (CAAAA)n Simple_repeat Simple_repeat 2 87 0 2 659 303 349 46 23 chr13 9712954 9713156 -110571156 + MIR SINE MIR 53 259 -9 2 659 227 355 27 27 chr13 9713235 9713345 -110570967 - MIRc SINE MIR -45 223 114 2 659 202 250 19 0 chr13 9713497 9713549 -110570763 + (CATATA)n Simple_repeat Simple_repeat 4 56 0 2 659 23 33 0 0 chr13 9714439 9714469 -110569843 + AT_rich Low_complexity Low_complexity 1 30 0 2 659 223 291 23 11 chr13 9715297 9715384 -110568928 + (CATG)n Simple_repeat Simple_repeat 2 89 0 2 659 834 172 192 11 chr13 9716884 9717066 -110567246 + B3 SINE B2 2 216 0 2 659 265 169 30 30 chr13 9717123 9717190 -110567122 - L1MA6 LINE L1 -7 6284 6218 2 659 456 200 0 0 chr13 9717190 9717285 -110567027 + (TA)n Simple_repeat Simple_repeat 2 96 0 2 659 291 235 13 4 chr13 9717323 9717411 -110566901 - L1MA6 LINE L1 -152 6148 6060 2 659 1022 191 237 22 chr13 9717496 9717812 -110566500 + ORR1C2 LTR MaLR 1 384 0 2 659 501 246 18 0 chr13 9718255 9718426 -110565886 + (CATA)n Simple_repeat Simple_repeat 3 176 0 2 659 23 0 0 0 chr13 9719063 9719086 -110565226 + AT_rich Low_complexity Low_complexity 1 23 0 2 659 862 110 0 8 chr13 9719649 9719777 -110564535 - B1_Mur3 SINE Alu -1 148 22 2 659 491 255 13 46 chr13 9719777 9719801 -110564511 - ID_B1 SINE B4 0 224 78 2 659 532 179 51 22 chr13 9720321 9720458 -110563854 + B3A SINE B2 1 141 -57 2 659 242 219 0 161 chr13 9722389 9722476 -110561836 + RSINE1 SINE B4 93 165 0 2 659 417 20 0 0 chr13 9723014 9723064 -110561248 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 659 255 224 0 0 chr13 9723085 9723134 -110561178 - ID4 SINE ID -26 57 9 2 659 273 227 33 33 chr13 9723166 9723257 -110561055 - L1ME3B LINE L1 -287 5953 5863 2 659 225 0 0 0 chr13 9723502 9723527 -110560785 + (TC)n Simple_repeat Simple_repeat 1 25 0 2 659 284 0 28 0 chr13 9723527 9723562 -110560750 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 659 4255 49 0 0 chr13 9723652 9724163 -110560149 - L1Md_F2 LINE L1 -12 6570 6060 2 659 1374 269 53 31 chr13 9725057 9725510 -110558802 - Lx6 LINE L1 -31 7429 6967 2 659 189 171 0 0 chr13 9725530 9725565 -110558747 + T-rich Low_complexity Low_complexity 1 35 0 2 659 630 256 42 42 chr13 9725787 9725979 -110558333 + B3A SINE B2 7 198 0 2 659 519 250 8 8 chr13 9726037 9726154 -110558158 - PB1D7 SINE Alu -1 119 3 2 659 234 343 15 0 chr13 9726244 9726328 -110557984 + B1_Mur3 SINE Alu 1 86 -64 2 659 315 0 0 0 chr13 9726507 9726542 -110557770 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 659 252 0 0 0 chr13 9726542 9726569 -110557743 + (GA)n Simple_repeat Simple_repeat 1 28 0 2 659 379 200 13 0 chr13 9726726 9726801 -110557511 - ID4_ SINE ID -6 77 2 2 659 1247 111 32 0 chr13 9729373 9729562 -110554750 - B2_Mm2 SINE B2 0 195 1 2 659 387 188 56 56 chr13 9729843 9729950 -110554362 + B3 SINE B2 110 216 0 2 659 399 127 48 0 chr13 9730527 9730590 -110553722 + Lx3B LINE L1 5971 6036 -940 2 659 1268 116 74 0 chr13 9730596 9730811 -110553501 + Lx3B LINE L1 6743 6973 0 2 659 2374 69 119 11 chr13 9731777 9732129 -110552183 + RLTR10 LTR ERVK 1 390 0 2 659 596 88 22 0 chr13 9732381 9732472 -110551840 + (GAAAA)n Simple_repeat Simple_repeat 2 94 0 2 659 1016 45 0 0 chr13 9733314 9733448 -110550864 + B1_Mus2 SINE Alu 14 147 0 2 659 1968 110 3 43 chr13 9733826 9734150 -110550162 - L1Md_F2 LINE L1 0 6582 6272 2 659 240 35 0 0 chr13 9734972 9735001 -110549311 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 3 659 468 294 94 19 chr13 9735943 9736210 -110548102 + B4A SINE B4 5 291 -1 3 659 201 171 0 0 chr13 9736297 9736332 -110547980 + A-rich Low_complexity Low_complexity 1 35 0 3 659 1200 42 7 0 chr13 9736798 9736942 -110547370 - B1_Mm SINE Alu -1 146 2 3 659 253 217 113 78 chr13 9736945 9737060 -110547252 + L1MEf LINE L1 1680 1798 -4402 3 659 25 51 0 0 chr13 9737150 9737189 -110547123 + AT_rich Low_complexity Low_complexity 1 39 0 3 659 272 333 29 0 chr13 9737194 9737332 -110546980 + B1F1 SINE Alu 1 142 -7 3 659 595 257 37 16 chr13 9738642 9738803 -110545509 - ID_B1 SINE B4 0 224 70 3 659 919 289 140 27 chr13 9738964 9739796 -110544516 - L1MC1 LINE L1 -66 6442 5455 3 659 436 223 68 116 chr13 9739836 9739983 -110544329 - B4 SINE B4 0 292 153 3 659 2337 146 93 41 chr13 9740054 9740497 -110543815 + RMER4A LTR ERVK 1 466 0 3 659 518 251 200 18 chr13 9740548 9740828 -110543484 - L1MC1 LINE L1 -901 5420 5090 3 659 980 256 185 31 chr13 9740853 9741192 -110543120 - L1MC1 LINE L1 -1312 5009 4609 3 659 759 141 85 43 chr13 9741192 9741208 -110543104 - B1_Mm SINE Alu 0 147 136 3 659 195 42 0 0 chr13 9741208 9741232 -110543080 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 659 759 141 85 43 chr13 9741232 9741356 -110542956 - B1_Mm SINE Alu -12 135 1 3 659 980 256 185 31 chr13 9741356 9741492 -110542820 - L1MC1 LINE L1 -1713 4608 4461 3 659 1273 289 123 105 chr13 9741585 9742839 -110541473 - L1MC1 LINE L1 -5163 1345 69 3 659 229 26 53 0 chr13 9742839 9742877 -110541435 + (TTG)n Simple_repeat Simple_repeat 2 41 0 3 659 1273 289 123 105 chr13 9742877 9742890 -110541422 - L1MC1 LINE L1 -6440 68 56 3 659 233 339 44 9 chr13 9743248 9743361 -110540951 - PB1D10 SINE Alu 0 117 1 3 659 383 245 198 13 chr13 9743501 9743658 -110540654 + L1MB2 LINE L1 5973 6158 -13 3 659 359 152 172 0 chr13 9743893 9743992 -110540320 - B1_Mus2 SINE Alu -2 145 30 3 659 679 309 117 51 chr13 9744505 9745078 -110539234 - L1MB4 LINE L1 -246 5934 5324 3 659 352 314 28 19 chr13 9745282 9745389 -110538923 - PB1D10 SINE Alu -9 108 1 3 659 283 273 77 24 chr13 9745398 9745567 -110538745 - L1MB4 LINE L1 -953 5193 5016 3 659 467 182 141 0 chr13 9745854 9745953 -110538359 + B1_Mur2 SINE Alu 1 113 -36 3 659 236 196 0 0 chr13 9745914 9745960 -110538352 + B4 SINE B4 164 209 -83 3 659 581 27 13 0 chr13 9745960 9746035 -110538277 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 659 646 272 128 0 chr13 9746087 9746282 -110538030 + B4 SINE B4 1 220 -72 3 659 611 205 57 127 chr13 9746432 9746644 -110537668 - B3A SINE B2 0 198 2 3 659 21 57 0 0 chr13 9746715 9746750 -110537562 + AT_rich Low_complexity Low_complexity 1 35 0 3 659 1612 42 21 0 chr13 9747035 9747224 -110537088 + B2_Mm1t SINE B2 1 193 0 3 659 3386 98 28 4 chr13 9747238 9747731 -110536581 + Lx3A LINE L1 6470 6974 -7 3 659 247 266 86 25 chr13 9747749 9747830 -110536482 + L1MA8 LINE L1 5851 5936 -355 3 659 180 0 0 0 chr13 9748087 9748107 -110536205 + (TA)n Simple_repeat Simple_repeat 1 20 0 3 659 1408 93 10 5 chr13 9748280 9748474 -110535838 + B2_Mm2 SINE B2 1 195 0 3 659 617 218 0 8 chr13 9748486 9748611 -110535701 + B1_Mur4 SINE Alu 1 124 -26 3 659 36 53 0 0 chr13 9749458 9749515 -110534797 + AT_rich Low_complexity Low_complexity 1 57 0 3 659 5302 53 3 3 chr13 9750243 9750896 -110533416 + L1Md_F2 LINE L1 4934 5587 -296 3 659 8600 32 0 2 chr13 9750896 9751892 -110532420 + L1Md_F2 LINE L1 5588 6581 -1 3 659 22 0 0 0 chr13 9752314 9752336 -110531976 + AT_rich Low_complexity Low_complexity 1 22 0 3 659 331 250 0 0 chr13 9754335 9754415 -110529897 - ID4 SINE ID -2 81 2 3 659 1126 75 0 7 chr13 9755574 9755722 -110528590 + B1_Mm SINE Alu 1 147 0 3 659 306 0 0 0 chr13 9756268 9756302 -110528010 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 659 288 0 0 0 chr13 9756664 9756696 -110527616 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 659 198 0 0 0 chr13 9756862 9756884 -110527428 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 659 486 0 0 0 chr13 9757786 9757840 -110526472 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 659 904 170 0 13 chr13 9758411 9758560 -110525752 - B1_Mus2 SINE Alu 0 147 1 3 659 273 57 0 0 chr13 9760190 9760225 -110524087 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 659 292 289 129 36 chr13 9760358 9760498 -110523814 + RSINE1 SINE B4 3 155 -10 3 659 260 247 113 41 chr13 9761048 9761145 -110523167 - MIR SINE MIR -150 112 9 3 659 30 27 0 0 chr13 9763462 9763499 -110520813 + GC_rich Low_complexity Low_complexity 1 37 0 3 659 199 138 17 33 chr13 9763519 9763579 -110520733 + (CCG)n Simple_repeat Simple_repeat 1 59 0 3 659 210 71 0 0 chr13 9763605 9763633 -110520679 + (CCG)n Simple_repeat Simple_repeat 3 30 0 3 659 23 68 0 0 chr13 9763691 9763735 -110520577 + GC_rich Low_complexity Low_complexity 1 44 0 3 659 22 68 0 40 chr13 9763863 9763939 -110520373 + GC_rich Low_complexity Low_complexity 1 73 0 3 659 216 97 0 0 chr13 9763940 9763971 -110520341 + (CTCG)n Simple_repeat Simple_repeat 2 32 0 3 659 24 32 0 0 chr13 9764074 9764105 -110520207 + GC_rich Low_complexity Low_complexity 1 31 0 3 659 259 157 0 54 chr13 9764140 9764214 -110520098 + (CCGGG)n Simple_repeat Simple_repeat 1 70 0 3 659 23 33 0 0 chr13 9765192 9765222 -110519090 + AT_rich Low_complexity Low_complexity 1 30 0 3 659 394 298 0 58 chr13 9765231 9765352 -110518960 + RSINE1 SINE B4 4 117 -48 3 659 351 113 0 0 chr13 9765585 9765638 -110518674 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 659 194 0 39 0 chr13 9766496 9766522 -110517790 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 3 659 485 71 0 14 chr13 9767152 9767223 -110517089 + (TG)n Simple_repeat Simple_repeat 1 70 0 3 659 836 259 33 44 chr13 9767243 9767514 -110516798 - B4A SINE B4 -22 270 3 3 659 657 25 0 0 chr13 9767521 9767600 -110516712 + (TC)n Simple_repeat Simple_repeat 2 80 0 3 659 774 258 5 0 chr13 9768236 9768422 -110515890 - B4 SINE B4 -12 280 94 3 659 3268 78 15 7 chr13 9768438 9768901 -110515411 + L1_Mus3 LINE L1 6171 6637 -1 3 659 23 33 0 0 chr13 9769310 9769340 -110514972 + AT_rich Low_complexity Low_complexity 1 30 0 3 659 388 171 0 14 chr13 9769351 9769422 -110514890 - B4 SINE B4 -219 73 4 3 659 609 249 107 63 chr13 9769682 9769952 -110514360 + RLTR11B LTR ERVK 5 286 -167 3 659 243 250 35 61 chr13 9770002 9770117 -110514195 + RLTR11B LTR ERVK 284 395 -58 3 659 4923 116 31 42 chr13 9770117 9770974 -110513338 - L1_Mur2 LINE L1 -485 5392 4545 3 659 1803 98 0 12 chr13 9770972 9771220 -110513092 + Lx2B LINE L1 5632 5876 -1124 3 659 3656 130 67 3 chr13 9771221 9771785 -110512527 + Lx2B LINE L1 6374 6973 -27 3 659 573 350 39 21 chr13 9772117 9772397 -110511915 + B4A SINE B4 2 286 -6 3 659 345 24 0 0 chr13 9772989 9773031 -110511281 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 3 659 823 215 50 35 chr13 9773158 9773199 -110511113 + B3 SINE B2 1 42 -174 3 659 2268 103 25 12 chr13 9773199 9773522 -110510790 + ORR1A2 LTR MaLR 1 327 0 3 659 823 215 50 35 chr13 9773522 9773682 -110510630 + B3 SINE B2 43 205 -11 3 659 288 300 0 36 chr13 9773702 9773785 -110510527 + ID4_ SINE ID 1 80 -3 3 659 801 222 11 17 chr13 9773881 9774055 -110510257 - B3 SINE B2 -11 205 33 3 659 350 283 0 39 chr13 9774479 9774582 -110509730 + B4 SINE B4 1 99 -193 3 659 1056 93 0 0 chr13 9774582 9774732 -110509580 + (TC)n Simple_repeat Simple_repeat 2 151 0 3 659 246 105 0 0 chr13 9774744 9774782 -110509530 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 659 252 302 178 0 chr13 9774798 9774927 -110509385 + B4A SINE B4 118 269 -23 3 659 189 0 0 0 chr13 9775449 9775470 -110508842 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 3 659 463 282 85 80 chr13 9775585 9775797 -110508515 - B3 SINE B2 -2 214 2 3 659 398 311 74 7 chr13 9775826 9775975 -110508337 - RSINE1 SINE B4 -2 163 5 3 659 373 222 25 0 chr13 9776104 9776185 -110508127 + ID4_ SINE ID 1 83 0 3 659 292 238 297 16 chr13 9776362 9776490 -110507822 + RSINE1 SINE B4 2 165 0 3 659 282 56 0 0 chr13 9776708 9776744 -110507568 + (T)n Simple_repeat Simple_repeat 1 36 0 3 659 497 276 0 38 chr13 9777208 9777340 -110506972 + ID_B1 SINE B4 98 224 0 3 659 498 261 54 0 chr13 9777944 9778074 -110506238 + RSINE1 SINE B4 16 152 -13 3 659 322 260 102 44 chr13 9778413 9778550 -110505762 - ID_B1 SINE B4 0 224 80 3 659 5371 54 0 12 chr13 9778668 9779342 -110504970 + L1Md_F2 LINE L1 5917 6582 0 3 659 656 276 136 10 chr13 9779442 9779640 -110504672 + ID_B1 SINE B4 2 224 0 3 659 310 213 12 62 chr13 9779761 9779841 -110504471 + RSINE1 SINE B4 55 130 -35 3 659 207 0 0 0 chr13 9780191 9780214 -110504098 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 3 659 797 164 30 7 chr13 9780219 9780354 -110503958 - B1_Mus2 SINE Alu -7 140 3 3 659 434 159 9 0 chr13 9780699 9780806 -110503506 + (TG)n Simple_repeat Simple_repeat 2 109 0 3 659 551 290 14 0 chr13 9780809 9780954 -110503358 - B1_Mur1 SINE Alu -1 148 2 3 659 1267 40 0 0 chr13 9780981 9781129 -110503183 + B1_Mus1 SINE Alu 1 148 0 3 659 393 261 50 71 chr13 9781160 9781358 -110502954 + B3A SINE B2 2 195 -3 3 659 211 113 0 36 chr13 9781502 9781557 -110502755 + (CAAA)n Simple_repeat Simple_repeat 4 56 0 3 659 983 249 18 0 chr13 9781703 9781920 -110502392 + ID_B1 SINE B4 4 224 0 3 659 286 336 103 57 chr13 9782120 9782508 -110501804 - L2 LINE L2 -728 2691 2286 3 659 245 247 0 12 chr13 9782854 9782936 -110501376 + A-rich Low_complexity Low_complexity 4 84 0 3 659 792 257 42 84 chr13 9783272 9783557 -110500755 + B4A SINE B4 11 283 -9 3 659 592 282 51 46 chr13 9783579 9783776 -110500536 - B3A SINE B2 0 198 1 3 659 229 196 19 38 chr13 9783846 9783886 -110500426 + PB1D10 SINE Alu 10 48 -69 3 659 575 167 7 22 chr13 9783886 9784021 -110500291 + RLTR15 LTR ERVK 1 133 -226 3 659 286 149 45 0 chr13 9784097 9784164 -110500148 + CT-rich Low_complexity Low_complexity 3 72 0 3 659 476 314 73 56 chr13 9784284 9784571 -110499741 + B4 SINE B4 1 292 0 4 659 575 220 0 0 chr13 9784738 9784847 -110499465 + ID_B1 SINE B4 109 217 -7 4 659 381 43 0 0 chr13 9785045 9785092 -110499220 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 659 378 0 0 0 chr13 9786026 9786068 -110498244 + (TC)n Simple_repeat Simple_repeat 2 43 0 4 659 448 299 71 60 chr13 9786495 9786776 -110497536 + B4A SINE B4 1 284 -8 4 659 853 278 22 9 chr13 9787325 9787554 -110496758 + B4A SINE B4 2 233 -59 4 659 4467 118 136 10 chr13 9787560 9788237 -110496075 + L1_Mus1 LINE L1 45 1124 -5495 4 659 3361 43 2 0 chr13 9788237 9788632 -110495680 - MTA_Mm LTR MaLR 0 396 1 4 659 32313 93 7 14 chr13 9788632 9794103 -110490209 + L1_Mus1 LINE L1 1125 6565 -5 4 659 371 281 0 0 chr13 9794103 9794192 -110490120 + B4A SINE B4 204 292 0 4 659 229 329 0 0 chr13 9794194 9794273 -110490039 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 4 659 271 330 9 0 chr13 9794413 9794519 -110489793 + Charlie5 DNA MER1_type 1 107 -2517 4 659 513 231 19 0 chr13 9794604 9794712 -110489600 + PB1D7 SINE Alu 10 119 -1 4 659 222 115 0 55 chr13 9796318 9796373 -110487939 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 659 24 32 0 0 chr13 9796376 9796407 -110487905 + AT_rich Low_complexity Low_complexity 1 31 0 4 659 869 298 95 60 chr13 9796709 9797177 -110487135 + Lx9 LINE L1 6957 7456 -188 4 659 360 0 0 0 chr13 9797177 9797217 -110487095 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 659 513 289 66 89 chr13 9797217 9797342 -110486970 + Lx9 LINE L1 7328 7466 -7 4 659 502 278 37 8 chr13 9797456 9797590 -110486722 - B4 SINE B4 -71 221 84 4 659 238 273 102 0 chr13 9797717 9797805 -110486507 - B4 SINE B4 -195 97 1 4 659 463 257 26 17 chr13 9797922 9798037 -110486275 - PB1D10 SINE Alu -1 116 1 4 659 274 197 91 0 chr13 9797979 9798045 -110486267 - B4A SINE B4 -146 146 75 4 659 1709 21 0 0 chr13 9798054 9798246 -110486066 - B2_Mm1a SINE B2 0 193 2 4 659 402 39 0 0 chr13 9798779 9798831 -110485481 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 659 428 285 36 54 chr13 9798842 9799009 -110485303 - RSINE1 SINE B4 0 165 2 4 659 207 177 63 16 chr13 9799325 9799388 -110484924 + C-rich Low_complexity Low_complexity 4 69 0 4 659 638 262 42 37 chr13 9799696 9799910 -110484402 + L1_Rod LINE L1 5573 5787 -60 4 659 249 360 0 10 chr13 9799968 9800069 -110484243 - MLT1C LTR MaLR -28 439 340 4 659 232 279 23 159 chr13 9800326 9800458 -110483854 - PB1 SINE Alu -2 125 12 4 659 297 0 0 0 chr13 9800797 9800830 -110483482 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 659 918 73 0 0 chr13 9801022 9801145 -110483167 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 4 659 1125 72 87 35 chr13 9801148 9801320 -110482992 - B2_Mm2 SINE B2 -14 181 1 4 659 267 31 0 0 chr13 9801373 9801405 -110482907 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 4 659 595 219 151 17 chr13 9801410 9801582 -110482730 - B3 SINE B2 -19 197 3 4 659 336 279 0 55 chr13 9802077 9802187 -110482125 - PB1D10 SINE Alu -1 116 13 4 659 996 285 28 3 chr13 9802197 9802486 -110481826 + Lx8 LINE L1 6667 6962 -511 4 659 1775 109 8 0 chr13 9802484 9802740 -110481572 - L1_Mus3 LINE L1 -151 6487 6230 4 659 341 303 78 99 chr13 9802955 9803339 -110480973 - MTEa LTR MaLR 0 379 4 4 659 748 254 58 19 chr13 9803630 9803835 -110480477 + B3 SINE B2 1 213 -3 4 659 673 301 0 13 chr13 9803854 9804009 -110480303 - RSINE1 SINE B4 -4 161 9 4 659 2316 79 82 0 chr13 9804128 9804458 -110479854 - IAPEY2_LTR LTR ERVK 0 357 1 4 659 183 129 0 0 chr13 9804777 9804808 -110479504 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 4 659 184 59 0 56 chr13 9804818 9804854 -110479458 + (TCTCCC)n Simple_repeat Simple_repeat 4 37 0 4 659 581 240 0 23 chr13 9804857 9804985 -110479327 - B1_Mur3 SINE Alu -21 128 4 4 659 233 298 14 127 chr13 9804985 9805022 -110479290 - MT2B LTR ERVL -448 153 133 4 659 255 214 0 0 chr13 9805138 9805194 -110479118 - ID_B1 SINE B4 0 224 169 4 659 1535 117 8 23 chr13 9805292 9805555 -110478757 - RLTR9E LTR ERVK 0 409 151 4 659 2235 92 21 51 chr13 9805575 9805964 -110478348 - RLTR1B LTR ERV1 -1 511 135 4 659 1215 219 40 55 chr13 9806100 9806448 -110477864 - ETnERV-int LTR ERVK -2970 344 2 4 659 2531 100 48 20 chr13 9806449 9806847 -110477465 - RLTR9E LTR ERVK 0 409 1 4 659 3863 35 2 7 chr13 9806899 9807363 -110476949 - L1Md_F3 LINE L1 -1 6583 6122 4 659 1062 71 35 0 chr13 9807400 9807541 -110476771 + B1_Mm SINE Alu 2 147 0 4 659 270 0 0 0 chr13 9807541 9807571 -110476741 + (A)n Simple_repeat Simple_repeat 1 30 0 4 659 1481 202 108 122 chr13 9807602 9808120 -110476192 - RMER5 LTR ERV1 -7 527 17 4 659 426 248 123 90 chr13 9808532 9808687 -110475625 - ID_B1 SINE B4 -50 174 15 4 659 937 184 38 43 chr13 9809754 9809964 -110474348 - B3 SINE B2 -6 210 2 4 659 348 183 21 11 chr13 9810047 9810141 -110474171 + CT-rich Low_complexity Low_complexity 2 96 0 4 659 335 228 92 0 chr13 9810172 9810266 -110474046 - PB1D10 SINE Alu 0 117 16 4 659 250 292 0 0 chr13 9811037 9811102 -110473210 - B4 SINE B4 -146 146 82 4 659 200 114 0 28 chr13 9811815 9811851 -110472461 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 659 1084 88 7 0 chr13 9811896 9812043 -110472269 + B1_Mur3 SINE Alu 2 149 0 4 659 4095 207 25 76 chr13 9812052 9812988 -110471324 - Lx6 LINE L1 -18 7442 6555 4 659 234 0 0 0 chr13 9813724 9813750 -110470562 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 659 207 0 0 0 chr13 9813769 9813792 -110470520 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 4 659 618 282 63 40 chr13 9813907 9814129 -110470183 + MTE2b LTR MaLR 1 227 -152 4 659 250 143 78 16 chr13 9814141 9814205 -110470107 + RMER5 LTR ERV1 15 82 -452 4 659 742 285 125 16 chr13 9814360 9814663 -110469649 + RMER5 LTR ERV1 85 420 -114 4 659 313 312 0 79 chr13 9814759 9814860 -110469452 + MTE2b LTR MaLR 224 316 -63 4 659 238 270 21 63 chr13 9815339 9815434 -110468878 - Lx8 LINE L1 -6 7467 7377 4 659 329 190 24 209 chr13 9815399 9815605 -110468707 - RMER1C Other Other -68 1274 1107 4 659 1169 284 48 26 chr13 9815496 9815915 -110468397 - Lx8 LINE L1 -153 7320 6893 4 659 638 258 30 0 chr13 9815925 9816092 -110468220 + ID_B1 SINE B4 53 224 0 4 659 741 178 0 22 chr13 9816388 9816526 -110467786 - B1_Mm SINE Alu -12 135 1 4 659 604 213 82 0 chr13 9816788 9816910 -110467402 + ID_B1 SINE B4 86 217 -7 4 659 955 231 50 15 chr13 9816918 9817120 -110467192 + B3 SINE B2 1 209 -7 4 659 22 0 0 0 chr13 9817121 9817143 -110467169 + AT_rich Low_complexity Low_complexity 1 22 0 4 659 666 308 15 8 chr13 9817651 9817916 -110466396 + L1M2 LINE L1 4286 4552 -1591 4 659 727 201 12 24 chr13 9818677 9818845 -110465467 + MTC LTR MaLR 9 174 -245 4 659 3581 154 129 4 chr13 9818835 9819557 -110464755 + RMER13A LTR ERVK 15 826 -34 4 659 308 189 122 0 chr13 9819555 9819629 -110464683 + MTC LTR MaLR 137 219 -200 4 659 459 0 0 0 chr13 9820116 9820167 -110464145 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 659 236 185 19 0 chr13 9820582 9820636 -110463676 + GA-rich Low_complexity Low_complexity 4 58 0 4 659 1202 100 0 6 chr13 9820636 9820817 -110463495 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 659 1194 179 9 9 chr13 9820834 9821060 -110463252 + MTC LTR MaLR 196 421 0 4 659 503 244 93 11 chr13 9821065 9821247 -110463065 + L1M2 LINE L1 4569 4765 -1375 4 659 628 74 0 21 chr13 9821319 9821416 -110462896 + (CA)n Simple_repeat Simple_repeat 1 95 0 4 659 3181 66 10 2 chr13 9822083 9822480 -110461832 + MTB LTR MaLR 1 400 0 4 659 858 267 5 28 chr13 9822879 9823091 -110461221 + B4A SINE B4 1 207 -85 4 659 1251 254 99 8 chr13 9824209 9824582 -110459730 - MTD LTR MaLR 0 419 13 4 659 261 257 142 28 chr13 9824730 9824906 -110459406 - L1MC LINE L1 -274 5890 5695 4 659 414 269 11 0 chr13 9824971 9825064 -110459248 + ID_B1 SINE B4 2 95 -129 4 659 1048 181 62 5 chr13 9825064 9825258 -110459054 + B3 SINE B2 1 205 -11 4 659 560 245 25 25 chr13 9825629 9825792 -110458520 - B3A SINE B2 -31 167 5 4 659 679 247 33 0 chr13 9825830 9825980 -110458332 - RSINE1 SINE B4 0 165 11 4 659 392 55 0 18 chr13 9826049 9826105 -110458207 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 659 301 328 23 8 chr13 9826193 9826322 -110457990 + L1M3 LINE L1 5423 5553 -627 4 659 429 54 0 0 chr13 9826336 9826392 -110457920 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 659 26 0 0 0 chr13 9826449 9826475 -110457837 + AT_rich Low_complexity Low_complexity 1 26 0 4 659 274 194 90 0 chr13 9826725 9826792 -110457520 - ID4_ SINE ID -10 73 1 4 659 377 262 173 27 chr13 9826946 9827249 -110457063 - L1MC LINE L1 -503 5681 5338 4 659 1104 158 33 23 chr13 9827252 9827466 -110456846 - URR1B DNA MER1_type -2 223 8 4 659 460 216 69 35 chr13 9827660 9827833 -110456479 - L1MC LINE L1 -822 5324 5146 4 659 286 343 20 0 chr13 9827904 9828003 -110456309 - ID_B1 SINE B4 -122 102 2 4 659 5935 38 8 4 chr13 9828014 9828730 -110455582 - L1Md_F3 LINE L1 -1 6583 5865 4 82 10086 53 3 2 chr13 9828730 9830517 -110453795 - L1Md_F3 LINE L1 -192 6392 4601 4 660 567 57 0 0 chr13 9830515 9830585 -110453727 - L1Md_F3 LINE L1 -2896 2987 2918 4 660 5170 55 3 0 chr13 9830583 9831256 -110453056 - L1Md_F3 LINE L1 -3257 2626 1952 4 660 36792 39 0 34 chr13 9831266 9837911 -110446401 - L1Md_T LINE L1 0 6585 162 4 660 5339 67 42 0 chr13 9837911 9839109 -110445203 - L1Md_F3 LINE L1 -3918 1965 715 4 660 1076 158 0 26 chr13 9839117 9839312 -110445000 - L1VL1 LINE L1 -6232 190 1 4 660 264 322 120 22 chr13 9839323 9839682 -110444630 - L1MC LINE L1 -985 5161 4768 4 660 2839 48 82 156 chr13 9841009 9841522 -110442790 + IAPLTR2_Mm LTR ERVK 1 475 0 4 660 673 290 124 14 chr13 9842671 9842954 -110441358 + MTEa LTR MaLR 66 379 0 4 660 2185 187 34 40 chr13 9843063 9843404 -110440908 + RLTR19 LTR ERVK 1 343 -156 4 660 2377 71 62 0 chr13 9843404 9843712 -110440600 + ORR1A2 LTR MaLR 1 327 0 4 660 2185 187 34 40 chr13 9843712 9843872 -110440440 + RLTR19 LTR ERVK 344 499 0 4 660 326 281 78 89 chr13 9843960 9844162 -110440150 - B4 SINE B4 0 292 96 4 660 1125 88 0 0 chr13 9844162 9844309 -110440003 - B1_Mus2 SINE Alu 0 147 1 4 660 326 281 78 89 chr13 9844309 9844399 -110439913 - B4 SINE B4 -197 95 4 4 660 249 250 26 13 chr13 9844437 9844514 -110439798 - MTD LTR MaLR -3 416 339 4 660 396 0 0 0 chr13 9844931 9844975 -110439337 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 660 3765 52 2 46 chr13 9845120 9845623 -110438689 + L1_Mus2 LINE L1 6086 6566 0 5 660 395 233 12 0 chr13 9845636 9845722 -110438590 - MTD LTR MaLR -331 88 2 4 660 295 261 14 0 chr13 9846933 9847002 -110437310 + ID4 SINE ID 3 72 -11 5 660 276 30 0 0 chr13 9847023 9847056 -110437256 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 660 392 270 32 0 chr13 9847562 9847688 -110436624 - RMER15 LTR ERVL -13 562 433 5 660 376 358 0 8 chr13 9847941 9848062 -110436250 + polypurine Low_complexity Low_complexity 1 120 0 5 660 461 242 46 15 chr13 9848090 9848220 -110436092 - ORR1E LTR MaLR -220 139 6 5 660 232 266 11 92 chr13 9848405 9848492 -110435820 + ORR1E LTR MaLR 6 85 -274 5 660 696 275 181 18 chr13 9848577 9848903 -110435409 + MTE2a LTR MaLR 1 379 0 5 660 1668 179 23 72 chr13 9848958 9849147 -110435165 + ORR1D1 LTR MaLR 3 176 -198 5 660 264 30 0 0 chr13 9849147 9849180 -110435132 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 5 660 1668 179 23 72 chr13 9849180 9849381 -110434931 + ORR1D1 LTR MaLR 177 374 0 5 660 267 31 0 0 chr13 9849696 9849728 -110434584 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 5 660 13046 48 3 1 chr13 9849735 9852029 -110432283 - L1Md_F2 LINE L1 -2 6580 4282 5 660 2764 34 6 3 chr13 9852029 9852355 -110431957 - IAPLTR2b LTR ERVK 0 327 1 5 660 31112 28 5 1 chr13 9852355 9855893 -110428419 - IAPEz-int LTR ERVK 0 6481 2929 5 660 180 0 0 0 chr13 9855893 9855913 -110428399 + (T)n Simple_repeat Simple_repeat 1 20 0 5 660 8660 26 0 0 chr13 9855951 9857093 -110427219 - L1Md_T LINE L1 -1 6581 5440 5 660 6151 30 0 0 chr13 9857093 9857786 -110426526 - IAPEz-int LTR ERVK -3540 2941 2249 5 660 7933 82 56 44 chr13 9857777 9859100 -110425212 - IAPEz-int LTR ERVK -5233 1248 9 5 660 2729 40 6 3 chr13 9859101 9859427 -110424885 - IAPLTR2b LTR ERVK 0 327 1 5 660 22636 76 3 1 chr13 9859427 9863307 -110421005 - L1Md_F LINE L1 -1596 4287 399 5 660 7503 76 21 1 chr13 9863317 9864409 -110419903 - L1_Mus1 LINE L1 -1 6566 5453 5 660 585 77 13 0 chr13 9864405 9864483 -110419829 + L1_Mus1 LINE L1 5439 5517 -366 5 660 320 0 0 24 chr13 9864525 9864566 -110419746 + (TTA)n Simple_repeat Simple_repeat 3 42 0 5 660 1336 279 58 35 chr13 9865279 9865754 -110418558 + RMER1B Other Other 55 521 -545 5 660 3953 212 166 25 chr13 9865758 9866410 -110417902 + RMER1A Other Other 3 577 -453 5 660 1226 186 46 105 chr13 9866410 9866801 -110417511 + RLTR9A LTR ERVK 1 368 0 5 660 3953 177 205 17 chr13 9866801 9867243 -110417069 + RMER1A Other Other 578 1028 -2 5 660 860 213 28 37 chr13 9867256 9867471 -110416841 - B3 SINE B2 -1 215 3 5 660 282 314 0 0 chr13 9867857 9867927 -110416385 + (TG)n Simple_repeat Simple_repeat 2 71 0 5 660 766 196 7 0 chr13 9867939 9868087 -110416225 - B1_Mur4 SINE Alu -1 149 1 5 660 330 282 51 184 chr13 9868087 9868196 -110416116 - B4 SINE B4 -216 76 2 5 660 477 0 0 0 chr13 9868693 9868746 -110415566 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 5 660 534 266 29 6 chr13 9868776 9868950 -110415362 - Charlie2a DNA MER1_type -1221 1640 1463 5 660 251 213 13 0 chr13 9868994 9869069 -110415243 + (TGAA)n Simple_repeat Simple_repeat 4 79 0 5 660 321 26 0 0 chr13 9869222 9869260 -110415052 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 660 270 0 0 0 chr13 9869260 9869289 -110415023 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 660 498 236 122 0 chr13 9869999 9870122 -110414190 + ID_B1 SINE B4 87 224 0 5 660 767 289 81 19 chr13 9870382 9870653 -110413659 + B4A SINE B4 1 288 -4 5 660 216 97 0 0 chr13 9870674 9870705 -110413607 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 5 660 964 179 55 0 chr13 9870969 9871170 -110413142 + MTC-int LTR MaLR 512 723 -535 5 660 736 236 6 42 chr13 9871175 9871341 -110412971 - RSINE1 SINE B4 -3 162 2 5 660 267 173 0 0 chr13 9871357 9871409 -110412903 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 660 603 213 69 31 chr13 9871409 9871569 -110412743 - B4 SINE B4 0 292 127 5 660 724 235 16 1 chr13 9872050 9872205 -110412107 + RSINE1 SINE B4 3 160 -5 5 660 204 125 0 0 chr13 9872527 9872559 -110411753 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 660 838 260 33 14 chr13 9872570 9872781 -110411531 - ID_B1 SINE B4 -8 216 2 5 660 816 134 0 0 chr13 9873244 9873378 -110410934 + (TG)n Simple_repeat Simple_repeat 2 135 0 5 660 393 230 20 0 chr13 9873452 9873604 -110410708 + GA-rich Low_complexity Low_complexity 2 156 0 5 660 27 49 0 0 chr13 9878325 9878366 -110405946 + AT_rich Low_complexity Low_complexity 1 41 0 5 660 376 229 156 0 chr13 9878475 9878597 -110405715 - B1F SINE Alu -8 141 1 5 660 483 18 0 0 chr13 9879090 9879146 -110405166 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 5 660 440 324 21 31 chr13 9879146 9879340 -110404972 - ID_B1 SINE B4 -31 193 2 5 660 309 141 0 0 chr13 9880151 9880222 -110404090 + (CTA)n Simple_repeat Simple_repeat 1 71 0 5 660 22 0 0 0 chr13 9880541 9880563 -110403749 + AT_rich Low_complexity Low_complexity 1 22 0 5 660 562 280 20 0 chr13 9880596 9880746 -110403566 - RSINE1 SINE B4 -10 155 3 5 660 952 241 25 0 chr13 9881261 9881464 -110402848 - B3 SINE B2 -7 209 2 5 660 538 301 56 52 chr13 9882530 9882800 -110401512 + B4 SINE B4 1 271 -21 5 660 3634 48 0 34 chr13 9882800 9883270 -110401042 - L1Md_F2 LINE L1 0 6582 6129 5 660 1721 15 0 290 chr13 9883271 9883643 -110400669 + L1_Mm LINE L1 5550 5813 -70 5 660 352 277 0 58 chr13 9884124 9884319 -110399993 + (CAACC)n Simple_repeat Simple_repeat 1 183 0 5 660 296 323 180 0 chr13 9884477 9884638 -110399674 + MER20 DNA MER1_type 30 219 0 5 660 323 275 132 20 chr13 9884761 9884913 -110399399 + B4 SINE B4 9 177 -115 5 660 337 235 0 34 chr13 9884955 9885043 -110399269 + B4 SINE B4 2 86 -206 5 660 227 239 57 86 chr13 9885043 9885060 -110399252 + BC1_Mm scRNA scRNA 2 103 -49 5 660 717 212 31 112 chr13 9885209 9885432 -110398880 + B3 SINE B2 2 206 -10 5 660 270 318 103 29 chr13 9885976 9886151 -110398161 - MIR SINE MIR -21 241 54 5 660 825 286 21 62 chr13 9886156 9886447 -110397865 + B4 SINE B4 2 280 -12 5 660 360 0 0 0 chr13 9886451 9886491 -110397821 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 660 21 0 0 0 chr13 9887184 9887205 -110397107 + AT_rich Low_complexity Low_complexity 1 21 0 5 660 447 286 56 112 chr13 9887936 9888239 -110396073 - B4A SINE B4 -6 286 1 5 660 223 208 38 100 chr13 9888584 9888664 -110395648 - MIRc SINE MIR -123 145 71 5 660 552 231 153 67 chr13 9888786 9888918 -110395394 + Lx8 LINE L1 7192 7335 -138 5 660 1452 68 0 0 chr13 9888918 9889213 -110395099 + (GGA)n Simple_repeat Simple_repeat 1 295 0 5 660 552 231 153 67 chr13 9889213 9889332 -110394980 + Lx8 LINE L1 7336 7465 -8 5 660 415 312 18 0 chr13 9890332 9890444 -110393868 - ID_B1 SINE B4 -24 200 87 5 660 296 256 22 22 chr13 9890510 9890602 -110393710 - Arthur1B DNA Tip100 0 1225 1134 5 660 7469 11 0 0 chr13 9892155 9892982 -110391330 + L1Md_A LINE L1 4760 5586 -297 5 660 8991 14 0 0 chr13 9892982 9893978 -110390334 + L1Md_A LINE L1 5587 6582 0 5 660 298 233 8 127 chr13 9894169 9894287 -110390025 - Lx8 LINE L1 -8 7465 7362 5 660 660 87 0 0 chr13 9894291 9894383 -110389929 + (TG)n Simple_repeat Simple_repeat 1 92 0 5 660 351 293 56 19 chr13 9894605 9894765 -110389547 - MLT1D LTR MaLR -266 239 74 5 660 251 309 118 31 chr13 9895141 9895268 -110389044 + MIR SINE MIR 12 149 -113 5 660 724 70 10 0 chr13 9895770 9895870 -110388442 + B2_Mm1t SINE B2 1 101 -92 5 660 272 98 368 28 chr13 9895922 9896028 -110388284 + B2_Mm2 SINE B2 47 188 -7 5 660 254 258 0 0 chr13 9896398 9896460 -110387852 - MER2B DNA MER2_type -272 64 3 5 660 289 316 109 7 chr13 9896888 9897025 -110387287 + RSINE1 SINE B4 2 152 -13 5 660 303 96 0 0 chr13 9897030 9897082 -110387230 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 660 185 238 0 0 chr13 9898143 9898185 -110386127 + MER5A DNA MER1_type 25 66 -123 5 660 222 254 16 0 chr13 9898537 9898600 -110385712 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 660 803 284 89 11 chr13 9898613 9898884 -110385428 + B4 SINE B4 1 292 0 5 660 266 180 16 0 chr13 9898915 9898976 -110385336 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 5 660 333 0 0 0 chr13 9899218 9899255 -110385057 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 660 315 0 0 0 chr13 9899866 9899901 -110384411 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 660 569 69 11 0 chr13 9900131 9900218 -110384094 + (GA)n Simple_repeat Simple_repeat 1 88 0 5 660 509 219 6 0 chr13 9900618 9900778 -110383534 + (TG)n Simple_repeat Simple_repeat 2 162 0 5 660 1143 247 26 4 chr13 9900801 9901069 -110383243 - B4A SINE B4 -18 274 1 5 660 273 311 104 0 chr13 9901507 9901613 -110382699 + MER58B DNA MER1_type 1 117 -224 5 660 423 194 0 0 chr13 9901946 9902049 -110382263 + (TG)n Simple_repeat Simple_repeat 1 103 0 5 660 211 222 78 35 chr13 9902234 9902354 -110381958 + MIRc SINE MIR 87 214 -48 5 660 198 0 0 0 chr13 9902823 9902845 -110381467 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 660 468 248 9 18 chr13 9902874 9902985 -110381327 - B4 SINE B4 0 292 183 5 660 293 308 0 21 chr13 9903015 9903108 -110381204 - B4 SINE B4 -190 102 12 5 660 2045 242 84 26 chr13 9903165 9903665 -110380647 + Lx6 LINE L1 6851 7379 -81 5 660 450 0 0 0 chr13 9904624 9904674 -110379638 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 660 819 249 45 64 chr13 9904686 9904952 -110379360 - B4 SINE B4 -31 261 1 5 660 1182 55 7 0 chr13 9905491 9905637 -110378675 - B1_Mus2 SINE Alu 0 147 1 5 660 818 126 0 7 chr13 9906144 9906280 -110378032 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 5 660 504 0 0 0 chr13 9906283 9906339 -110377973 + (TTTCC)n Simple_repeat Simple_repeat 5 60 0 5 660 210 143 0 0 chr13 9906345 9906380 -110377932 + (TCTCCC)n Simple_repeat Simple_repeat 1 35 0 6 660 519 17 0 0 chr13 9906384 9906444 -110377868 + (TTTC)n Simple_repeat Simple_repeat 3 62 0 6 660 886 241 90 43 chr13 9907025 9907281 -110377031 + B4A SINE B4 11 278 -14 6 660 462 18 0 0 chr13 9907292 9907347 -110376965 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 660 629 258 60 11 chr13 9908374 9908558 -110375754 + ID_B1 SINE B4 32 224 0 6 660 1418 247 18 73 chr13 9908609 9909007 -110375305 + MTE2a LTR MaLR 1 376 -3 6 660 802 204 0 0 chr13 9909059 9909191 -110375121 - B1_Mur2 SINE Alu -13 136 5 6 660 1083 270 7 45 chr13 9911404 9911695 -110372617 + B4 SINE B4 12 291 -1 6 660 247 326 0 0 chr13 9911704 9911790 -110372522 + (CA)n Simple_repeat Simple_repeat 2 87 0 6 660 761 316 102 15 chr13 9911930 9912650 -110371662 + L1MB4 LINE L1 5373 6173 -7 6 660 200 380 9 9 chr13 9912720 9912829 -110371483 - MIR SINE MIR -122 140 32 6 660 263 307 0 11 chr13 9914305 9914394 -110369918 + L1ME2z LINE L1 6202 6289 -155 6 660 620 291 6 0 chr13 9914644 9914819 -110369493 + B4 SINE B4 43 218 -74 6 660 888 256 85 33 chr13 9914828 9915099 -110369213 + Lx7 LINE L1 6817 7101 -595 6 660 1182 158 4 86 chr13 9915153 9915409 -110368903 + Lx4A LINE L1 6824 7058 0 6 660 1116 82 7 0 chr13 9915735 9915882 -110368430 - B1_Mus1 SINE Alu 0 148 1 6 660 477 284 40 26 chr13 9916465 9916617 -110367695 + Lx7 LINE L1 7147 7300 -396 6 660 327 25 0 0 chr13 9916617 9916657 -110367655 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 660 583 210 31 106 chr13 9916859 9917019 -110367293 + B1_Mur1 SINE Alu 2 149 0 6 660 238 299 13 0 chr13 9917157 9917314 -110366998 + (CA)n Simple_repeat Simple_repeat 2 160 0 6 660 846 242 53 13 chr13 9918020 9918246 -110366066 + B4A SINE B4 2 236 -56 6 660 1529 107 0 21 chr13 9919032 9919270 -110365042 - ORR1A2 LTR MaLR -94 233 1 6 660 463 328 87 32 chr13 9919473 9919750 -110364562 + B4 SINE B4 1 292 0 6 660 776 345 88 65 chr13 9920374 9920817 -110363495 + Lx8 LINE L1 6861 7327 -146 6 660 506 16 16 0 chr13 9920817 9920880 -110363432 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 660 776 345 88 65 chr13 9920880 9921025 -110363287 + Lx8 LINE L1 7328 7463 -10 6 660 545 246 22 15 chr13 9921335 9921471 -110362841 + B1F SINE Alu 1 137 -12 6 660 555 90 0 0 chr13 9921822 9921900 -110362412 + (TA)n Simple_repeat Simple_repeat 2 79 0 6 660 560 292 22 27 chr13 9921907 9922090 -110362222 - B3A SINE B2 -16 182 1 6 660 1837 39 0 13 chr13 9922314 9922546 -110361766 + L1Md_F2 LINE L1 6353 6581 -1 6 660 664 281 71 38 chr13 9923022 9923288 -110361024 - B4 SINE B4 -16 276 2 6 660 252 276 93 19 chr13 9923447 9923554 -110360758 - ORR1E LTR MaLR 0 379 265 6 660 555 274 84 57 chr13 9923578 9923876 -110360436 - ORR1E LTR MaLR -52 307 2 6 660 207 0 0 0 chr13 9924464 9924487 -110359825 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 660 252 200 36 0 chr13 9924593 9924648 -110359664 + MIRm SINE MIR 101 157 -119 6 660 2197 52 4 0 chr13 9924712 9924984 -110359328 - L1Md_F2 LINE L1 0 6582 6310 6 660 1189 48 7 0 chr13 9925078 9925224 -110359088 - B1_Mus1 SINE Alu 0 148 2 6 660 487 268 32 0 chr13 9925248 9925371 -110358941 + B1F SINE Alu 9 135 -14 6 660 464 359 77 29 chr13 9925984 9926257 -110358055 - B4A SINE B4 -4 288 3 6 660 669 236 44 6 chr13 9926337 9926495 -110357817 - ID_B1 SINE B4 -54 170 7 6 660 534 189 0 0 chr13 9927207 9927302 -110357010 + BC1_Mm scRNA scRNA 5 99 -53 6 660 325 189 40 13 chr13 9927370 9927445 -110356867 + MTC-int LTR MaLR 1181 1257 -1 6 660 1188 178 9 0 chr13 9927446 9927659 -110356653 + MTC LTR MaLR 1 215 -206 6 660 536 98 20 59 chr13 9927659 9927793 -110356519 + ORR1A2 LTR MaLR 1 142 -252 6 660 893 66 0 0 chr13 9927793 9927899 -110356413 - L1_Mus1 LINE L1 -111 6456 6351 6 660 406 58 0 0 chr13 9927897 9927949 -110356363 + L1_Mus1 LINE L1 6264 6315 -252 6 660 1385 115 5 0 chr13 9927949 9928157 -110356155 + ORR1A2 LTR MaLR 119 327 0 6 660 1011 147 116 0 chr13 9928157 9928346 -110355966 + MTC LTR MaLR 211 421 0 6 660 235 253 105 0 chr13 9928360 9928455 -110355857 + L1MA7 LINE L1 6106 6210 -81 6 660 350 189 122 0 chr13 9929472 9929562 -110354750 - PB1D10 SINE Alu 0 117 17 6 660 222 238 103 35 chr13 9929493 9929580 -110354732 - ID_B1 SINE B4 -55 169 77 6 660 1031 275 35 88 chr13 9929830 9930229 -110354083 + MTEb LTR MaLR 2 379 0 6 660 242 302 0 0 chr13 9930262 9930325 -110353987 + PB1D7 SINE Alu 47 109 -11 6 660 359 21 21 0 chr13 9930325 9930373 -110353939 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 6 660 510 17 0 0 chr13 9931273 9931332 -110352980 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 660 741 248 100 19 chr13 9931344 9931554 -110352758 - B4A SINE B4 -39 253 27 6 660 244 270 15 146 chr13 9931682 9931812 -110352500 + B2_Mm2 SINE B2 57 169 -26 6 660 1110 302 3 3 chr13 9932486 9932778 -110351534 + B4A SINE B4 1 292 0 6 660 276 174 0 0 chr13 9932778 9932824 -110351488 - RLTR20C LTR ERVK 0 534 489 6 660 249 33 0 0 chr13 9932837 9932867 -110351445 + (CCTG)n Simple_repeat Simple_repeat 1 30 0 6 660 1187 183 4 43 chr13 9933159 9933393 -110350919 - URR1B DNA MER1_type 0 225 1 6 660 1655 189 86 11 chr13 9933778 9934126 -110350186 + ORR1D1 LTR MaLR 1 374 0 6 660 1172 243 88 18 chr13 9934307 9934638 -110349674 + ORR1E LTR MaLR 1 354 -5 6 660 933 294 21 32 chr13 9934944 9935225 -110349087 - B4A SINE B4 -13 279 2 6 660 198 0 0 0 chr13 9935469 9935491 -110348821 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 660 249 235 29 0 chr13 9935942 9936010 -110348302 - B4 SINE B4 -222 70 1 6 660 608 274 17 6 chr13 9936348 9936524 -110347788 - B3A SINE B2 -16 182 5 6 660 359 244 0 0 chr13 9937540 9937618 -110346694 - U2 snRNA snRNA -110 78 1 6 660 180 250 45 30 chr13 9938301 9938367 -110345945 - MIR3 SINE MIR -23 185 119 6 660 720 135 28 28 chr13 9940197 9940342 -110343970 + Lx4A LINE L1 6912 7056 -2 6 660 28 0 0 0 chr13 9940342 9940370 -110343942 + AT_rich Low_complexity Low_complexity 1 28 0 6 660 396 0 0 0 chr13 9942190 9942234 -110342078 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 660 240 200 0 0 chr13 9942468 9942523 -110341789 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 6 660 938 243 123 4 chr13 9942549 9942809 -110341503 - B4A SINE B4 -1 291 1 6 660 208 315 110 0 chr13 9942939 9943066 -110341246 - MIR SINE MIR -90 172 32 6 660 297 109 0 0 chr13 9943619 9943665 -110340647 + (CAAAC)n Simple_repeat Simple_repeat 2 47 0 6 660 225 121 102 17 chr13 9943679 9943738 -110340574 + Tigger10 DNA Tigger 1706 1769 -74 6 660 275 164 0 16 chr13 9943921 9943983 -110340329 + GA-rich Low_complexity Low_complexity 3 63 0 6 660 342 0 0 0 chr13 9943983 9944021 -110340291 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 660 225 0 0 0 chr13 9944521 9944546 -110339766 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 660 891 235 30 40 chr13 9945538 9945753 -110338559 - B4 SINE B4 -3 289 75 6 660 37 39 0 0 chr13 9946086 9946137 -110338175 + AT_rich Low_complexity Low_complexity 1 51 0 6 660 362 314 17 17 chr13 9946576 9946696 -110337616 - PB1D9 SINE Alu 0 120 1 6 660 882 288 84 27 chr13 9946731 9947066 -110337246 + Lx7 LINE L1 6736 7089 -607 6 660 438 314 87 13 chr13 9947072 9947301 -110337011 + Lx8 LINE L1 7173 7418 -55 6 660 27 0 0 0 chr13 9947331 9947358 -110336954 + AT_rich Low_complexity Low_complexity 1 27 0 6 660 280 266 64 0 chr13 9947361 9947455 -110336857 - L1MB3 LINE L1 -11 6172 6073 6 660 596 241 62 50 chr13 9947463 9947642 -110336670 - MTE2a LTR MaLR -2 377 197 6 660 653 362 7 32 chr13 9947623 9947900 -110336412 - B4A SINE B4 -22 270 1 6 660 807 290 61 100 chr13 9947952 9948232 -110336080 - B4 SINE B4 -18 274 6 6 660 363 268 11 16 chr13 9948889 9949000 -110335312 - PB1D7 SINE Alu -6 114 6 6 660 939 272 19 9 chr13 9949027 9949242 -110335070 - ID_B1 SINE B4 -7 217 1 6 660 588 332 35 31 chr13 9950453 9950708 -110333604 + MLT1B LTR MaLR 131 386 -4 6 660 336 270 12 12 chr13 9950943 9951108 -110333204 + (TATG)n Simple_repeat Simple_repeat 4 168 0 6 660 192 304 65 56 chr13 9951623 9951731 -110332581 - MIRb SINE MIR -94 174 66 6 660 750 284 66 74 chr13 9952618 9952876 -110331436 - B4 SINE B4 -36 256 1 6 660 922 169 39 34 chr13 9953012 9953190 -110331122 + B2_Mm2 SINE B2 2 180 -15 6 660 186 43 0 0 chr13 9954433 9954456 -110329856 + (TAGA)n Simple_repeat Simple_repeat 2 24 0 6 660 430 271 175 0 chr13 9954612 9954778 -110329534 + Lx7 LINE L1 282 476 -7252 6 660 15970 166 47 103 chr13 9954817 9958688 -110325624 + Lx7 LINE L1 601 4381 -1499 6 660 3573 35 2 2 chr13 9958688 9959084 -110325228 - MTA_Mm LTR MaLR 0 396 1 6 660 15970 151 45 114 chr13 9959084 9959725 -110324587 + Lx7 LINE L1 4382 4871 -1009 6 660 602 60 0 12 chr13 9959725 9959809 -110324503 + (TTCC)n Simple_repeat Simple_repeat 2 84 0 6 82 37522 66 4 3 chr13 9959809 9965999 -110318313 - L1Md_F3 LINE L1 -15 6569 417 6 661 2230 80 0 3 chr13 9965994 9966294 -110318018 - L1_Mm LINE L1 -1595 4288 3990 6 661 5197 179 59 12 chr13 9966294 9967551 -110316761 + Lx7 LINE L1 4863 6184 -1512 6 661 390 173 0 0 chr13 9967561 9967636 -110316676 + (TCTCTG)n Simple_repeat Simple_repeat 4 78 0 6 661 1552 189 89 70 chr13 9967645 9968004 -110316308 + ORR1C2 LTR MaLR 2 367 -17 6 661 369 0 0 0 chr13 9968006 9968047 -110316265 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 661 6000 191 62 24 chr13 9968047 9969193 -110315119 + Lx7 LINE L1 6186 7374 -322 6 661 2187 130 11 43 chr13 9969218 9969589 -110314723 + ORR1B2 LTR MaLR 1 359 -8 7 661 201 39 0 0 chr13 9969596 9969622 -110314690 + (T)n Simple_repeat Simple_repeat 1 26 0 7 661 591 227 113 64 chr13 9969625 9969907 -110314405 + Lx7 LINE L1 7401 7696 0 6 661 913 240 24 24 chr13 9969998 9970207 -110314105 - B3 SINE B2 -1 215 7 7 661 390 42 0 0 chr13 9970525 9970573 -110313739 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 661 986 224 104 52 chr13 9970578 9970828 -110313484 - B4A SINE B4 -26 266 4 7 661 342 143 0 0 chr13 9971665 9971728 -110312584 + (CAA)n Simple_repeat Simple_repeat 1 63 0 7 661 722 316 29 29 chr13 9971934 9972208 -110312104 + B4A SINE B4 1 274 -18 7 661 492 62 0 0 chr13 9972224 9972288 -110312024 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 661 390 335 64 81 chr13 9972334 9972568 -110311744 + B4A SINE B4 53 282 -10 7 661 453 165 0 0 chr13 9972595 9972692 -110311620 + (CA)n Simple_repeat Simple_repeat 2 98 0 7 661 408 324 97 44 chr13 9974075 9974346 -110309966 - B4 SINE B4 -11 281 2 7 661 512 71 0 0 chr13 9974485 9974555 -110309757 - B1_Mur4 SINE Alu 0 150 81 7 661 180 0 0 0 chr13 9974731 9974751 -110309561 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 661 261 277 10 144 chr13 9975757 9975854 -110308458 + RSINE1 SINE B4 82 165 0 7 661 250 213 0 0 chr13 9975861 9975908 -110308404 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 661 855 259 26 16 chr13 9976177 9976369 -110307943 - ID_B1 SINE B4 -29 195 2 7 661 189 383 9 18 chr13 9977138 9977247 -110307065 - MIR SINE MIR -41 221 114 7 661 384 153 30 10 chr13 9977248 9977347 -110306965 + CT-rich Low_complexity Low_complexity 3 103 0 7 661 532 268 51 45 chr13 9977400 9977576 -110306736 + B4 SINE B4 1 177 -115 7 661 870 265 83 50 chr13 9977976 9978182 -110306130 - B4 SINE B4 -4 288 74 7 661 618 120 0 20 chr13 9978182 9978284 -110306028 - L1Md_F2 LINE L1 -13 6569 6470 7 661 870 265 83 50 chr13 9978284 9978355 -110305957 - B4 SINE B4 -219 73 2 7 661 325 77 46 0 chr13 9978982 9979047 -110305265 + (TTTG)n Simple_repeat Simple_repeat 1 68 0 7 661 936 220 11 6 chr13 9979845 9980019 -110304293 - B4A SINE B4 -6 286 112 7 661 2981 61 8 3 chr13 9980101 9980464 -110303848 - L1_Mus1 LINE L1 0 6567 6203 7 661 233 350 39 20 chr13 9981458 9981560 -110302752 + MER5A1 DNA MER1_type 2 105 -61 7 661 1087 244 37 88 chr13 9981973 9982072 -110302240 - B4 SINE B4 -7 285 193 7 661 198 0 0 0 chr13 9982072 9982094 -110302218 + (TCTG)n Simple_repeat Simple_repeat 2 23 0 7 661 1087 244 37 88 chr13 9982094 9982290 -110302022 - B4 SINE B4 -100 192 5 7 661 630 302 155 33 chr13 9983055 9983391 -110300921 - Lx8 LINE L1 -201 7272 6896 7 661 575 295 109 11 chr13 9983847 9984022 -110300290 + B3A SINE B2 2 193 -5 7 661 199 275 145 0 chr13 9984302 9984371 -110299941 - L2a LINE L2 0 3426 3348 7 661 252 257 70 134 chr13 9984521 9984692 -110299620 + RMER15 LTR ERVL 1 160 -415 7 661 388 263 103 26 chr13 9984793 9984910 -110299402 + RMER15 LTR ERVL 438 563 -12 7 661 196 368 65 47 chr13 9984922 9985136 -110299176 - L2 LINE L2 -415 3004 2787 7 661 339 228 116 32 chr13 9985183 9985278 -110299034 + MTEb LTR MaLR 256 358 -21 7 661 1325 91 10 51 chr13 9986449 9986646 -110297666 + B2_Mm2 SINE B2 3 191 -4 7 661 780 68 0 0 chr13 9986980 9987083 -110297229 + (TTTTC)n Simple_repeat Simple_repeat 3 105 0 7 661 259 204 0 36 chr13 9987930 9987986 -110296326 + PB1D9 SINE Alu 6 59 -61 7 661 431 255 0 0 chr13 9987991 9988097 -110296215 + (CAGG)n Simple_repeat Simple_repeat 2 107 0 7 661 388 226 33 131 chr13 9988098 9988191 -110296121 + B1_Mur4 SINE Alu 41 120 -30 7 661 4329 38 36 8 chr13 9988191 9988697 -110295615 - L1Md_F2 LINE L1 0 6582 6063 7 661 388 226 33 131 chr13 9988697 9988725 -110295587 + B1_Mur4 SINE Alu 121 150 0 7 661 227 239 0 32 chr13 9988778 9988873 -110295439 + (TTA)n Simple_repeat Simple_repeat 1 92 0 7 661 198 167 0 0 chr13 9989184 9989220 -110295092 + (ATTG)n Simple_repeat Simple_repeat 4 39 0 7 661 558 271 43 55 chr13 9989226 9989390 -110294922 - RSINE1 SINE B4 0 165 4 7 661 263 239 0 11 chr13 9989459 9989548 -110294764 + CT-rich Low_complexity Low_complexity 4 91 0 7 661 235 310 28 14 chr13 9990251 9990323 -110293989 - ID4_ SINE ID -10 73 1 7 661 470 268 169 56 chr13 9991098 9991289 -110293023 + B4 SINE B4 2 222 -70 7 661 248 0 0 30 chr13 9991289 9991322 -110292990 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 7 661 470 268 169 56 chr13 9991322 9991379 -110292933 + B4 SINE B4 223 277 -15 7 661 579 328 56 94 chr13 9992368 9992728 -110291584 - ORR1E LTR MaLR -6 353 8 7 661 260 357 17 25 chr13 9993299 9993417 -110290895 + MIR SINE MIR 110 226 -36 7 661 486 235 67 8 chr13 9993418 9993538 -110290774 + RSINE1 SINE B4 2 128 -37 7 661 270 0 0 0 chr13 9993956 9993986 -110290326 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 661 208 224 0 39 chr13 9994024 9994075 -110290237 + (CATA)n Simple_repeat Simple_repeat 4 52 0 7 661 615 121 0 0 chr13 9994465 9994564 -110289748 + (GGAA)n Simple_repeat Simple_repeat 2 100 0 7 661 2657 204 58 47 chr13 9994846 9995464 -110288848 + Lx6 LINE L1 6172 6796 -664 7 661 398 214 0 92 chr13 9995461 9995505 -110288807 + Lx7 LINE L1 7261 7299 -397 7 661 197 33 33 0 chr13 9995505 9995535 -110288777 + (CAAA)n Simple_repeat Simple_repeat 3 33 0 7 661 398 214 0 92 chr13 9995535 9995588 -110288724 + Lx7 LINE L1 7300 7349 -347 7 661 360 148 0 0 chr13 9995652 9995713 -110288599 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 661 1197 168 21 124 chr13 9995716 9995788 -110288524 + Lx7 LINE L1 7377 7436 -260 7 661 4909 56 0 20 chr13 9995788 9996387 -110287925 + L1Md_F2 LINE L1 5996 6582 0 7 661 1197 168 21 124 chr13 9996387 9996653 -110287659 + Lx7 LINE L1 7437 7680 -16 7 661 837 125 13 7 chr13 9996653 9996806 -110287506 + (GGAA)n Simple_repeat Simple_repeat 4 157 0 7 661 857 315 31 59 chr13 9997309 9997599 -110286713 + B4A SINE B4 4 285 -7 7 661 347 167 114 57 chr13 9997795 9997935 -110286377 + L1MCa LINE L1 1756 1903 -4605 7 661 401 263 114 46 chr13 9997974 9998149 -110286163 + L1MCa LINE L1 2008 2194 -4314 7 661 670 268 138 11 chr13 9998225 9998572 -110285740 + L1MCa LINE L1 2542 2932 -3389 7 661 195 162 0 0 chr13 9998581 9998618 -110285694 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 661 729 184 0 0 chr13 9998649 9998807 -110285505 + (CA)n Simple_repeat Simple_repeat 2 159 0 7 661 518 216 98 0 chr13 9998807 9998931 -110285381 + B3A SINE B2 9 148 -68 7 661 1157 278 149 31 chr13 9999020 9999799 -110284513 + L1MCa LINE L1 2947 3858 -2463 7 661 198 0 0 0 chr13 9999799 9999821 -110284491 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 661 1157 278 149 31 chr13 9999821 10000000 -110284312 + L1MCa LINE L1 3859 4018 -2303 7 661 1637 264 42 84 chr13 10000038 10000239 -110284073 + L1MC1 LINE L1 3957 4159 -1987 1 661 917 145 251 17 chr13 10000239 10000414 -110283898 + B3 SINE B2 1 216 0 2 661 1637 264 42 84 chr13 10000414 10000988 -110283324 + L1MC1 LINE L1 4160 4700 -1446 1 661 494 309 32 14 chr13 10001077 10001297 -110283015 + L1MC1 LINE L1 5841 6064 -269 1 661 554 275 151 68 chr13 10001322 10001587 -110282725 - B4 SINE B4 0 292 6 3 661 338 279 54 0 chr13 10001726 10001837 -110282475 + L1MC1 LINE L1 6216 6332 -1 1 661 468 323 100 28 chr13 10002551 10002841 -110281471 + ORR1E LTR MaLR 49 359 0 4 661 556 132 0 0 chr13 10003036 10003119 -110281193 - L1_Mm LINE L1 -1575 4308 4226 5 661 2661 90 23 13 chr13 10003119 10003503 -110280809 + L1_Mus3 LINE L1 6251 6638 0 6 661 7663 52 15 0 chr13 10004047 10004991 -110279321 - L1Md_F2 LINE L1 0 6582 5625 7 661 268 306 223 67 chr13 10005520 10005588 -110278724 - MIR SINE MIR -13 249 184 8 661 943 177 168 20 chr13 10005588 10005784 -110278528 + URR1B DNA MER1_type 1 225 0 9 661 268 306 223 67 chr13 10005784 10005908 -110278404 - MIR SINE MIR -79 183 27 8 661 210 128 0 0 chr13 10007481 10007520 -110276792 + (ATG)n Simple_repeat Simple_repeat 2 40 0 1 661 2282 187 37 5 chr13 10007829 10008237 -110276075 - MTC LTR MaLR 0 421 1 1 661 181 312 86 72 chr13 10008370 10008522 -110275790 - MIRb SINE MIR -47 221 68 1 661 558 265 36 7 chr13 10008903 10009040 -110275272 - B1F2 SINE Alu -7 142 2 1 661 486 0 0 0 chr13 10009437 10009491 -110274821 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 661 289 286 89 15 chr13 10009858 10009993 -110274319 - Tigger5 DNA MER2_type -2261 145 1 1 661 516 325 84 56 chr13 10010479 10010763 -110273549 - B4 SINE B4 0 292 1 1 661 450 0 0 0 chr13 10011018 10011068 -110273244 + (TCCA)n Simple_repeat Simple_repeat 1 50 0 1 661 299 113 19 0 chr13 10011093 10011146 -110273166 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 661 370 283 21 99 chr13 10011159 10011300 -110273012 - RSINE1 SINE B4 -33 132 3 1 661 502 169 11 0 chr13 10011502 10011591 -110272721 - BC1_Mm scRNA scRNA -56 96 7 2 661 239 306 35 12 chr13 10011774 10011860 -110272452 - Tigger12c DNA MER2_type -117 617 530 2 661 300 300 19 29 chr13 10013562 10013665 -110270647 + MER5A1 DNA MER1_type 4 105 -61 2 661 785 234 71 45 chr13 10013838 10014062 -110270250 - Lx8 LINE L1 0 7473 7244 2 661 354 231 95 86 chr13 10014059 10014281 -110270031 + Lx9 LINE L1 7419 7642 -2 2 661 396 0 0 0 chr13 10014550 10014594 -110269718 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 661 791 249 88 21 chr13 10015771 10015964 -110268348 + ID_B1 SINE B4 4 209 -15 2 661 510 161 19 19 chr13 10017796 10017954 -110266358 + (TA)n Simple_repeat Simple_repeat 2 159 0 2 661 457 296 19 13 chr13 10018490 10018724 -110265588 + L1MEc LINE L1 1284 1630 -4848 2 661 925 282 73 11 chr13 10019036 10019308 -110265004 + B4A SINE B4 4 292 0 2 661 288 0 0 0 chr13 10019323 10019355 -110264957 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 661 721 157 68 0 chr13 10019512 10019659 -110264653 + Lx9 LINE L1 7481 7637 -7 3 661 22 0 0 0 chr13 10020148 10020170 -110264142 + AT_rich Low_complexity Low_complexity 1 22 0 3 661 327 282 13 0 chr13 10020753 10020831 -110263481 - HAL1-3A_ME LINE L1 -809 2049 1971 3 661 837 106 155 0 chr13 10020926 10021068 -110263244 + Lx4A LINE L1 6893 7056 -2 3 661 504 292 37 90 chr13 10021118 10021306 -110263006 - B4A SINE B4 -112 180 3 3 661 720 289 145 8 chr13 10021889 10022144 -110262168 + B4A SINE B4 1 290 -2 3 661 387 0 0 0 chr13 10022647 10022690 -110261622 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 661 594 291 50 35 chr13 10024616 10024804 -110259508 - B4 SINE B4 -12 280 45 3 661 218 333 47 12 chr13 10024798 10024883 -110259429 - B4 SINE B4 -199 93 6 3 661 581 136 10 0 chr13 10024883 10024986 -110259326 + (TCTA)n Simple_repeat Simple_repeat 1 104 0 3 661 858 82 38 0 chr13 10025011 10025170 -110259142 + (TCTA)n Simple_repeat Simple_repeat 1 165 0 3 661 330 316 78 32 chr13 10025172 10025326 -110258986 - RSINE1 SINE B4 -3 162 2 4 661 856 320 19 19 chr13 10025745 10026016 -110258296 + B4A SINE B4 10 280 -12 4 661 432 0 0 0 chr13 10026021 10026069 -110258243 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 661 458 190 24 12 chr13 10026070 10026155 -110258157 + Lx9 LINE L1 7136 7221 -423 4 661 5878 191 115 37 chr13 10026491 10027800 -110256512 + Lx9 LINE L1 6093 7477 -167 4 661 451 101 12 12 chr13 10027800 10027880 -110256432 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 661 5878 191 115 37 chr13 10027880 10028008 -110256304 + Lx9 LINE L1 7478 7642 -2 4 661 607 264 71 0 chr13 10028533 10028673 -110255639 - B3 SINE B2 -63 153 4 4 661 417 202 33 2 chr13 10028751 10028851 -110255461 + MTEb LTR MaLR 278 379 0 4 661 894 152 13 6 chr13 10029072 10029231 -110255081 - L1_Mus3 LINE L1 -1 6637 6478 4 661 1017 222 15 0 chr13 10029243 10029441 -110254871 - B3 SINE B2 -10 206 6 4 661 243 0 0 0 chr13 10029701 10029728 -110254584 + (T)n Simple_repeat Simple_repeat 1 27 0 5 661 303 96 0 0 chr13 10030262 10030314 -110253998 + (T)n Simple_repeat Simple_repeat 1 52 0 5 661 396 0 0 0 chr13 10031537 10031581 -110252731 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 661 248 289 7 32 chr13 10031581 10031651 -110252661 - ID4 SINE ID -11 72 1 5 661 204 97 0 0 chr13 10031835 10031866 -110252446 + (TTA)n Simple_repeat Simple_repeat 2 32 0 5 661 704 259 55 49 chr13 10031877 10032060 -110252252 - ID_B1 SINE B4 -40 184 1 5 661 576 299 59 105 chr13 10032323 10032629 -110251683 - B4 SINE B4 0 292 1 5 661 2504 45 15 63 chr13 10033516 10033847 -110250465 + L1Md_F3 LINE L1 6270 6584 0 5 661 380 298 43 30 chr13 10034007 10034136 -110250176 + B1F SINE Alu 3 129 -20 5 661 186 103 0 0 chr13 10034454 10034483 -110249829 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 661 763 301 39 59 chr13 10034483 10034839 -110249473 - Lx8 LINE L1 -2 7471 7123 6 661 230 367 30 23 chr13 10034948 10035079 -110249233 - B4A SINE B4 -5 287 156 6 661 290 239 40 78 chr13 10035091 10035210 -110249102 - B3A SINE B2 -93 102 3 6 661 391 307 30 0 chr13 10035719 10035820 -110248492 + B1F1 SINE Alu 15 118 -31 6 661 2650 145 12 5 chr13 10035830 10036240 -110248072 - MTC LTR MaLR 0 421 9 6 661 791 284 67 0 chr13 10036287 10036481 -110247831 - ID_B1 SINE B4 -10 214 8 6 661 1453 227 80 20 chr13 10036698 10037048 -110247264 + MTE2b LTR MaLR 1 371 -8 6 661 316 238 0 65 chr13 10037228 10037305 -110247007 - BC1_Mm scRNA scRNA -74 78 7 6 661 629 266 54 76 chr13 10037821 10038045 -110246267 + B4 SINE B4 2 220 -72 6 661 362 329 0 0 chr13 10038723 10038805 -110245507 - ID2 SINE ID -1 82 1 6 661 1133 214 20 0 chr13 10038992 10039193 -110245119 - B3 SINE B2 -7 209 5 7 661 624 333 81 32 chr13 10039196 10039605 -110244707 + L2a LINE L2 2993 3421 -5 7 661 1278 189 281 26 chr13 10039925 10040050 -110244262 + RMER15 LTR ERVL 27 145 -430 7 661 3098 18 21 0 chr13 10040050 10040387 -110243925 + ORR1A0 LTR MaLR 1 344 -2 7 661 1278 189 281 26 chr13 10040387 10040684 -110243628 + RMER15 LTR ERVL 146 556 -19 7 661 281 344 165 6 chr13 10041672 10041830 -110242482 + MLT1H2 LTR MaLR 307 489 0 7 661 234 310 14 27 chr13 10042838 10042860 -110241452 + ID4 SINE ID 12 82 0 7 661 239 280 0 0 chr13 10042860 10042910 -110241402 + ID SINE ID 34 83 -141 7 661 21 36 0 0 chr13 10042915 10042943 -110241369 + AT_rich Low_complexity Low_complexity 1 28 0 7 661 327 25 0 0 chr13 10043541 10043581 -110240731 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 661 243 191 64 0 chr13 10043696 10043743 -110240569 - B4A SINE B4 -136 156 107 7 661 3830 86 35 18 chr13 10043753 10044087 -110240225 + RMER17A LTR ERVK 1 336 -415 8 661 1012 48 23 23 chr13 10044087 10044259 -110240053 + (TCTCC)n Simple_repeat Simple_repeat 2 173 0 8 661 3830 86 35 18 chr13 10044259 10044527 -110239785 + RMER17A LTR ERVK 337 613 -138 8 661 409 232 24 0 chr13 10044520 10044602 -110239710 - B4A SINE B4 -202 90 7 7 661 489 141 0 0 chr13 10045584 10045669 -110238643 + (TG)n Simple_repeat Simple_repeat 2 86 0 8 661 517 301 185 12 chr13 10045685 10045922 -110238390 - B4A SINE B4 -8 284 7 8 661 279 312 12 0 chr13 10046840 10046920 -110237392 - ID4_ SINE ID -2 81 1 8 661 252 0 0 0 chr13 10046934 10046962 -110237350 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 8 661 459 216 164 7 chr13 10046969 10047109 -110237203 - Lx5 LINE L1 -38 7012 6851 8 661 878 214 17 0 chr13 10047086 10047259 -110237053 + Lx5 LINE L1 6538 6713 -337 8 661 305 145 16 0 chr13 10047955 10048017 -110236295 + (TATG)n Simple_repeat Simple_repeat 1 63 0 8 661 757 267 159 27 chr13 10048025 10048283 -110236029 - B4 SINE B4 0 292 1 8 661 339 25 0 0 chr13 10048437 10048477 -110235835 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 661 405 0 0 0 chr13 10048477 10048521 -110235791 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 661 862 285 60 16 chr13 10048633 10048937 -110235375 - ORR1D2 LTR MaLR -10 360 41 9 661 238 269 39 0 chr13 10048932 10049010 -110235302 - ORR1C1 LTR MaLR -239 139 59 9 661 261 256 39 0 chr13 10049022 10049100 -110235212 - ORR1D2 LTR MaLR -239 139 59 9 661 354 262 139 0 chr13 10049068 10049190 -110235122 - ORR1D2 LTR MaLR -231 139 1 9 661 657 291 6 0 chr13 10049302 10049467 -110234845 - B3A SINE B2 -31 167 2 9 661 21 0 0 0 chr13 10049476 10049497 -110234815 + AT_rich Low_complexity Low_complexity 1 21 0 9 661 264 289 104 99 chr13 10050226 10050299 -110234013 - L1MC5 LINE L1 -728 7233 7161 9 661 775 267 28 0 chr13 10050299 10050475 -110233837 + B3A SINE B2 2 182 -16 9 661 264 289 104 99 chr13 10050475 10050746 -110233566 - L1MC5 LINE L1 -801 7160 6887 9 661 662 332 21 32 chr13 10050749 10050969 -110233343 + B4 SINE B4 1 218 -74 9 661 288 0 0 0 chr13 10050969 10051001 -110233311 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 9 661 662 332 21 32 chr13 10051001 10051063 -110233249 + B4 SINE B4 219 280 -12 9 661 378 0 0 0 chr13 10051074 10051116 -110233196 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 661 407 227 30 30 chr13 10051501 10051601 -110232711 - Lx9 LINE L1 -602 7042 6943 1 661 625 318 69 16 chr13 10051626 10051946 -110232366 + Lx9 LINE L1 7060 7396 -248 1 661 405 0 0 0 chr13 10051955 10052000 -110232312 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 661 300 219 40 81 chr13 10052002 10052126 -110232186 + Lx9 LINE L1 7526 7644 0 1 661 336 316 10 30 chr13 10052570 10052671 -110231641 + PB1D10 SINE Alu 18 116 -1 1 661 875 230 68 24 chr13 10053727 10053932 -110230380 - B3 SINE B2 -2 214 1 1 661 2610 198 16 2 chr13 10054218 10054729 -110229583 - Lx2B LINE L1 -57 6919 6392 1 661 453 171 0 0 chr13 10055416 10055504 -110228808 + CT-rich Low_complexity Low_complexity 4 91 0 1 661 837 293 62 5 chr13 10055508 10055737 -110228575 - ID_B1 SINE B4 -46 246 6 1 661 198 0 0 0 chr13 10056087 10056109 -110228203 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 661 913 113 12 18 chr13 10056109 10056280 -110228032 + (GGAGA)n Simple_repeat Simple_repeat 2 171 0 1 661 1918 279 66 65 chr13 10056372 10057254 -110227058 - Charlie1a DNA MER1_type -262 1193 311 1 661 239 234 31 15 chr13 10057254 10057319 -110226993 + ID SINE ID 2 67 -157 1 661 402 21 0 0 chr13 10057321 10057368 -110226944 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 661 212 193 0 50 chr13 10057418 10057478 -110226834 + GA-rich Low_complexity Low_complexity 2 58 0 1 661 291 114 0 0 chr13 10057620 10057664 -110226648 + (CATA)n Simple_repeat Simple_repeat 3 46 0 1 661 228 303 15 29 chr13 10057763 10057831 -110226481 - Charlie1a DNA MER1_type -1261 194 128 1 661 228 231 0 0 chr13 10057983 10058035 -110226277 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 661 24 0 0 0 chr13 10060668 10060692 -110223620 + AT_rich Low_complexity Low_complexity 1 24 0 1 661 481 270 95 0 chr13 10060773 10060910 -110223402 + B4A SINE B4 143 292 0 1 661 741 65 0 0 chr13 10060953 10061061 -110223251 + (CA)n Simple_repeat Simple_repeat 2 109 0 1 661 249 109 0 0 chr13 10061503 10061549 -110222763 + (A)n Simple_repeat Simple_repeat 1 46 0 1 661 183 352 67 0 chr13 10061565 10061670 -110222642 - MIRb SINE MIR -119 149 38 1 661 605 200 69 174 chr13 10063989 10064207 -110220105 - B3A SINE B2 0 198 1 1 661 495 0 0 0 chr13 10069599 10069654 -110214658 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 661 720 253 178 13 chr13 10070044 10070071 -110214241 + ORR1E LTR MaLR 1 37 -322 1 661 468 0 0 0 chr13 10070071 10070123 -110214189 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 661 720 253 178 13 chr13 10070123 10070399 -110213913 + ORR1E LTR MaLR 38 354 -5 1 661 973 136 6 6 chr13 10071621 10071799 -110212513 + (GA)n Simple_repeat Simple_repeat 2 179 0 1 661 213 264 0 0 chr13 10071799 10071871 -110212441 + GA-rich Low_complexity Low_complexity 2 73 0 1 661 853 307 14 83 chr13 10071925 10072132 -110212180 - B4 SINE B4 -13 279 92 1 661 659 260 70 0 chr13 10072132 10072332 -110211980 - B3 SINE B2 0 216 3 1 661 853 307 14 83 chr13 10072332 10072412 -110211900 - B4 SINE B4 -201 91 12 1 661 915 303 56 30 chr13 10072803 10073136 -110211176 + ORR1E LTR MaLR 1 366 -4 1 661 209 238 0 0 chr13 10073325 10073367 -110210945 - MIR SINE MIR -7 255 214 1 661 495 107 0 0 chr13 10073450 10073534 -110210778 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 661 720 130 0 0 chr13 10075128 10075243 -110209069 + (TA)n Simple_repeat Simple_repeat 1 115 0 1 661 188 397 30 71 chr13 10075370 10075636 -110208676 + L2c LINE L2 3054 3308 -79 1 661 327 252 20 20 chr13 10075900 10076001 -110208311 + GA-rich Low_complexity Low_complexity 1 101 0 1 661 539 112 0 11 chr13 10076019 10076109 -110208203 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 661 531 128 0 0 chr13 10076115 10076201 -110208111 + (GA)n Simple_repeat Simple_repeat 1 86 0 1 661 617 318 28 6 chr13 10076895 10077076 -110207236 - ID_B1 SINE B4 -2 222 42 1 661 398 301 0 0 chr13 10077307 10077400 -110206912 - B1F SINE Alu -6 143 51 1 661 1144 265 32 4 chr13 10078010 10078290 -110206022 + B4 SINE B4 5 292 0 1 661 399 89 0 0 chr13 10078309 10078365 -110205947 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 661 525 326 73 52 chr13 10078714 10079057 -110205255 + L3 LINE CR1 4126 4475 -14 1 661 282 29 0 0 chr13 10079132 10079167 -110205145 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 661 724 286 43 148 chr13 10079282 10079606 -110204706 - B4A SINE B4 0 292 3 1 661 405 145 0 0 chr13 10080330 10080406 -110203906 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 661 30 0 0 0 chr13 10080988 10081018 -110203294 + AT_rich Low_complexity Low_complexity 1 30 0 1 661 544 301 12 73 chr13 10081027 10081192 -110203120 - RSINE1 SINE B4 0 165 11 1 661 280 183 0 35 chr13 10081889 10081974 -110202338 + CT-rich Low_complexity Low_complexity 2 83 0 1 661 27 0 0 0 chr13 10081977 10082004 -110202308 + AT_rich Low_complexity Low_complexity 1 27 0 1 661 202 360 56 0 chr13 10082321 10082410 -110201902 - MIRc SINE MIR -102 166 73 1 661 560 243 141 0 chr13 10083266 10083316 -110200996 - B3 SINE B2 -5 211 148 1 661 324 0 0 0 chr13 10083316 10083352 -110200960 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 661 560 243 141 0 chr13 10083352 10083486 -110200826 - B3 SINE B2 -69 147 2 1 661 290 266 101 0 chr13 10084671 10084750 -110199562 + PB1D7 SINE Alu 18 104 -16 1 661 300 279 0 0 chr13 10084750 10084861 -110199451 + GA-rich Low_complexity Low_complexity 1 111 0 1 661 397 299 84 55 chr13 10085017 10085219 -110199093 + B4A SINE B4 11 218 -74 1 661 597 49 0 0 chr13 10085277 10085358 -110198954 + (CA)n Simple_repeat Simple_repeat 2 82 0 1 661 566 279 29 57 chr13 10085465 10085640 -110198672 + B3 SINE B2 47 216 0 1 661 318 295 13 0 chr13 10086111 10086189 -110198123 - ID4_ SINE ID -3 80 2 1 661 387 0 0 0 chr13 10086206 10086249 -110198063 + (TTTTA)n Simple_repeat Simple_repeat 5 47 0 1 661 661 316 38 12 chr13 10086277 10086437 -110197875 - B3A SINE B2 -33 165 2 1 661 262 286 46 85 chr13 10086457 10086587 -110197725 - PB1 SINE Alu 0 127 3 1 661 1307 98 38 0 chr13 10086632 10086816 -110197496 - B2_Mm2 SINE B2 -4 191 1 1 661 819 301 82 40 chr13 10087327 10087655 -110196657 + ORR1E LTR MaLR 16 357 -2 1 661 393 339 63 26 chr13 10087655 10087856 -110196456 - MLT1A LTR MaLR -39 335 117 1 661 221 75 25 0 chr13 10088833 10088873 -110195439 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 1 661 256 349 73 7 chr13 10089060 10089210 -110195102 - RSINE1 SINE B4 -2 163 4 1 661 1142 283 39 28 chr13 10091349 10091633 -110192679 + B4A SINE B4 6 292 0 1 661 225 250 0 0 chr13 10091633 10091693 -110192619 + (CACG)n Simple_repeat Simple_repeat 3 62 0 1 82 754 313 97 36 chr13 10092206 10092796 -110191516 + Lx9 LINE L1 6840 7465 -179 1 662 4555 34 2 0 chr13 10092830 10093367 -110190945 + L1Md_T LINE L1 6045 6582 0 1 662 1897 191 48 15 chr13 10093741 10094134 -110190178 + MTD LTR MaLR 13 418 -1 1 662 781 83 0 8 chr13 10094228 10094349 -110189963 - L1Md_F2 LINE L1 -12 6570 6451 1 662 330 26 0 0 chr13 10094507 10094546 -110189766 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 662 735 281 70 63 chr13 10094561 10094846 -110189466 - B4A SINE B4 0 292 6 1 662 486 119 0 0 chr13 10095931 10096015 -110188297 + (TG)n Simple_repeat Simple_repeat 2 85 0 1 662 790 280 0 49 chr13 10096327 10096511 -110187801 + B3A SINE B2 24 198 0 1 662 241 250 0 16 chr13 10097416 10097477 -110186835 + B4 SINE B4 1 60 -232 1 662 301 117 33 0 chr13 10097529 10097589 -110186723 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 1 662 311 174 43 17 chr13 10097633 10097750 -110186562 + (TA)n Simple_repeat Simple_repeat 1 120 0 1 662 373 336 22 14 chr13 10098205 10098344 -110185968 + B1F1 SINE Alu 1 140 -9 1 662 247 250 14 81 chr13 10098365 10098439 -110185873 + ID4_ SINE ID 1 69 -14 1 662 261 57 0 0 chr13 10098875 10098910 -110185402 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 662 484 308 30 8 chr13 10098933 10099064 -110185248 - B3A SINE B2 -64 134 1 1 662 245 279 0 14 chr13 10099167 10099236 -110185076 - RMER30 DNA MER1_type -45 157 90 1 662 228 67 0 0 chr13 10099348 10099378 -110184934 + (TAA)n Simple_repeat Simple_repeat 1 30 0 1 662 306 297 92 72 chr13 10101272 10101479 -110182833 + L1M4 LINE L1 5399 5609 -565 1 662 641 248 0 27 chr13 10101603 10101752 -110182560 + RSINE1 SINE B4 4 148 -17 1 662 925 132 12 0 chr13 10102364 10102531 -110181781 + (TTCC)n Simple_repeat Simple_repeat 2 170 0 1 662 342 0 0 0 chr13 10102958 10102996 -110181316 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 662 315 149 0 0 chr13 10103745 10103792 -110180520 - HAL1-3A_ME LINE L1 -836 2022 1976 1 662 634 322 17 0 chr13 10103805 10103982 -110180330 - B3A SINE B2 -18 180 1 1 662 264 241 11 54 chr13 10105375 10105467 -110178845 + (CTATT)n Simple_repeat Simple_repeat 1 88 0 1 662 292 341 0 83 chr13 10105478 10105670 -110178642 - L1MC2 LINE L1 -21 6323 6148 1 662 1504 236 80 3 chr13 10105791 10106143 -110178169 - MTEa LTR MaLR 0 379 1 1 662 354 293 17 17 chr13 10106691 10106809 -110177503 + MER105 DNA DNA 80 197 -7 1 662 296 275 123 16 chr13 10106908 10107030 -110177282 - B3 SINE B2 -1 215 81 1 662 1145 61 0 39 chr13 10107622 10107776 -110176536 + B1_Mus1 SINE Alu 1 148 0 1 662 232 113 36 36 chr13 10107776 10107831 -110176481 + A-rich Low_complexity Low_complexity 1 55 0 1 662 811 129 51 4 chr13 10107832 10108088 -110176224 + (TCTA)n Simple_repeat Simple_repeat 1 267 0 1 662 298 282 0 0 chr13 10108095 10108166 -110176146 - ID4_ SINE ID -11 72 2 2 662 716 214 21 0 chr13 10108477 10108622 -110175690 + B1_Mur4 SINE Alu 3 150 0 2 662 283 294 12 0 chr13 10109399 10109484 -110174828 - Tigger7 DNA MER2_type -1448 1043 958 2 662 1084 304 17 63 chr13 10109485 10109833 -110174479 - Tigger7 DNA MER2_type -2149 342 11 2 662 21 0 0 0 chr13 10110250 10110271 -110174041 + AT_rich Low_complexity Low_complexity 1 21 0 2 662 41 0 0 0 chr13 10110603 10110644 -110173668 + AT_rich Low_complexity Low_complexity 1 41 0 2 662 414 319 116 52 chr13 10111221 10111608 -110172704 + MER31B LTR ERV1 7 418 -48 2 662 226 341 111 0 chr13 10111756 10111882 -110172430 - MIRc SINE MIR -37 231 92 2 662 263 314 112 44 chr13 10112077 10112237 -110172075 - MIR SINE MIR -3 259 89 2 662 400 271 110 14 chr13 10112296 10112442 -110171870 - MER5A1 DNA MER1_type 0 166 7 2 662 618 14 0 0 chr13 10112519 10112590 -110171722 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 662 227 296 50 24 chr13 10113056 10113152 -110171160 - B1F SINE Alu -46 103 5 2 662 246 250 68 0 chr13 10113602 10113750 -110170562 + (TA)n Simple_repeat Simple_repeat 2 159 0 2 662 297 304 77 35 chr13 10114325 10114468 -110169844 - MIRb SINE MIR -27 241 93 2 662 261 191 0 0 chr13 10114543 10114590 -110169722 - MTD-int LTR MaLR -1323 47 1 2 662 1539 224 34 22 chr13 10114590 10114948 -110169364 - MTD LTR MaLR 0 421 55 2 662 1151 181 8 19 chr13 10114955 10115219 -110169093 + Lx4B LINE L1 6762 7022 -36 2 662 33 43 0 0 chr13 10115220 10115267 -110169045 + AT_rich Low_complexity Low_complexity 1 47 0 2 662 284 253 114 11 chr13 10115284 10115372 -110168940 - MTD LTR MaLR -299 120 24 2 662 491 381 32 5 chr13 10115452 10115668 -110168644 - MLT1A0 LTR MaLR -143 222 1 2 662 344 59 20 0 chr13 10116349 10116400 -110167912 + (CAAT)n Simple_repeat Simple_repeat 2 53 0 2 662 469 158 7 7 chr13 10116944 10117084 -110167228 + (CA)n Simple_repeat Simple_repeat 1 140 0 2 662 595 312 61 19 chr13 10117201 10117413 -110166899 - B4A SINE B4 -4 288 68 2 662 417 205 16 8 chr13 10118607 10118730 -110165582 + GA-rich Low_complexity Low_complexity 1 124 0 2 662 193 289 19 0 chr13 10119237 10119289 -110165023 - MIR SINE MIR -58 150 98 2 662 219 293 0 0 chr13 10120173 10120231 -110164081 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 662 603 245 13 53 chr13 10120490 10120641 -110163671 - B1F SINE Alu 0 149 5 2 662 195 100 0 0 chr13 10120991 10121021 -110163291 + (TATG)n Simple_repeat Simple_repeat 3 32 0 2 662 195 129 0 0 chr13 10121045 10121076 -110163236 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 662 234 91 0 0 chr13 10121082 10121115 -110163197 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 662 882 272 151 17 chr13 10121944 10122296 -110162016 - MTD LTR MaLR -20 399 1 2 662 920 314 86 8 chr13 10122329 10122586 -110161726 - B4 SINE B4 -4 288 12 2 662 396 270 0 0 chr13 10124912 10125060 -110159252 + (TG)n Simple_repeat Simple_repeat 1 148 0 2 662 690 235 0 0 chr13 10125073 10125440 -110158872 + (TG)n Simple_repeat Simple_repeat 1 367 0 2 662 1033 291 7 49 chr13 10125451 10125755 -110158557 - B4 SINE B4 0 292 2 2 662 591 112 0 0 chr13 10126037 10126126 -110158186 + (TTTC)n Simple_repeat Simple_repeat 4 92 0 2 662 8431 57 0 1 chr13 10126135 10127933 -110156379 - L1Md_F2 LINE L1 -9 6573 4777 2 662 807 262 143 0 chr13 10127933 10128177 -110156135 - MTD LTR MaLR -3 416 138 2 662 749 268 51 51 chr13 10128777 10128993 -110155319 - B3A SINE B2 0 216 1 2 662 5408 79 29 3 chr13 10130960 10131708 -110152604 - L1_Mus4 LINE L1 -1 6635 5868 2 662 272 175 16 0 chr13 10132098 10132161 -110152151 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 662 668 259 18 24 chr13 10132462 10132632 -110151680 - B3A SINE B2 -7 191 23 2 662 440 295 70 103 chr13 10133242 10133544 -110150768 + B4 SINE B4 1 292 0 2 662 180 152 0 0 chr13 10134222 10134255 -110150057 + (CAG)n Simple_repeat Simple_repeat 1 33 0 2 662 1200 48 0 0 chr13 10134734 10134881 -110149431 + B1_Mm SINE Alu 1 147 0 2 662 440 287 31 8 chr13 10135038 10135168 -110149144 + B1F SINE Alu 1 133 -16 2 662 680 312 30 34 chr13 10135776 10136038 -110148274 + B4A SINE B4 1 261 -31 2 662 316 103 35 0 chr13 10136086 10136144 -110148168 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 662 667 276 40 40 chr13 10137437 10137611 -110146701 - B3A SINE B2 -24 174 1 2 662 216 0 0 0 chr13 10137648 10137672 -110146640 + (TTA)n Simple_repeat Simple_repeat 1 24 0 2 662 1089 97 0 0 chr13 10137672 10137816 -110146496 - B1_Mus1 SINE Alu -4 144 1 2 662 180 77 0 0 chr13 10138034 10138060 -110146252 + (T)n Simple_repeat Simple_repeat 1 26 0 2 662 220 146 18 35 chr13 10138614 10138671 -110145641 + (CATATA)n Simple_repeat Simple_repeat 5 60 0 2 662 5954 122 45 8 chr13 10138671 10139594 -110144718 + RMER17B LTR ERVK 1 958 0 2 662 274 273 0 0 chr13 10139594 10139660 -110144652 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 662 444 230 0 0 chr13 10139665 10139800 -110144512 + (TA)n Simple_repeat Simple_repeat 1 135 0 2 662 715 345 69 44 chr13 10140777 10141183 -110143129 - MTD LTR MaLR -1 418 3 2 662 324 289 10 30 chr13 10142156 10142256 -110142056 + PB1D10 SINE Alu 2 99 -18 2 662 1025 286 42 24 chr13 10142569 10142856 -110141456 + B4A SINE B4 1 292 0 2 662 432 55 0 0 chr13 10142944 10142999 -110141313 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 662 295 310 57 45 chr13 10143161 10143247 -110141065 + L1ME1 LINE L1 5440 5530 -2255 2 662 192 40 0 0 chr13 10143247 10143272 -110141040 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 662 564 290 36 35 chr13 10143272 10143678 -110140634 + L1ME1 LINE L1 5531 5938 -1847 2 662 514 269 19 54 chr13 10144867 10145024 -110139288 + ID_B1 SINE B4 78 222 -2 2 662 291 313 0 48 chr13 10145198 10145297 -110139015 - Tigger7 DNA MER2_type 0 2491 2398 2 662 441 0 0 0 chr13 10145297 10145346 -110138966 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 662 851 346 34 14 chr13 10145465 10145761 -110138551 - Tigger7 DNA MER2_type -2186 305 4 2 662 200 347 0 0 chr13 10146013 10146088 -110138224 + MIRb SINE MIR 118 192 -76 2 662 222 286 38 25 chr13 10146122 10146201 -110138111 - ID4 SINE ID -1 82 3 2 662 364 23 0 0 chr13 10146390 10146434 -110137878 + B1_Mm SINE Alu 98 141 -6 2 662 294 29 0 0 chr13 10146437 10146472 -110137840 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 2 662 437 128 35 0 chr13 10146908 10146994 -110137318 + (CACCAT)n Simple_repeat Simple_repeat 4 92 0 2 662 231 114 0 0 chr13 10147312 10147347 -110136965 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 2 662 400 270 0 9 chr13 10147352 10147466 -110136846 - ID4_ SINE ID -41 111 1 2 662 275 260 80 74 chr13 10147548 10147710 -110136602 - Charlie1a DNA MER1_type -163 1292 1130 2 662 435 325 29 34 chr13 10148590 10148794 -110135518 + Lx8 LINE L1 7093 7295 -178 2 662 536 158 9 0 chr13 10148799 10148913 -110135399 + (CA)n Simple_repeat Simple_repeat 2 116 0 2 662 17622 84 20 1 chr13 10149275 10152564 -110131748 + L1Md_F LINE L1 373 3727 -2156 2 662 252 86 0 0 chr13 10152602 10152637 -110131675 + (A)n Simple_repeat Simple_repeat 1 35 0 2 662 230 307 125 0 chr13 10153064 10153152 -110131160 + RSINE1 SINE B4 31 129 -36 2 662 207 0 0 0 chr13 10153194 10153217 -110131095 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 662 531 0 0 0 chr13 10153217 10153275 -110131037 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 662 1430 140 22 9 chr13 10153830 10154053 -110130259 - URR1A DNA MER1_type 0 226 1 2 662 6410 48 2 12 chr13 10154105 10154909 -110129403 + L1Md_F2 LINE L1 5787 6582 0 2 662 23 54 0 0 chr13 10155066 10155103 -110129209 + AT_rich Low_complexity Low_complexity 1 37 0 2 662 22 0 0 0 chr13 10155182 10155204 -110129108 + AT_rich Low_complexity Low_complexity 1 22 0 2 662 992 255 34 11 chr13 10155394 10155660 -110128652 - B4A SINE B4 -18 274 3 2 662 911 18 26 0 chr13 10155820 10155934 -110128378 - L1Md_F3 LINE L1 -240 6344 6228 2 662 1204 208 78 10 chr13 10155934 10155978 -110128334 + ORR1A1 LTR MaLR 28 77 -317 2 662 1722 31 57 13 chr13 10155978 10156208 -110128104 + L1Md_F3 LINE L1 6345 6584 0 2 662 1879 60 4 4 chr13 10156208 10156459 -110127853 + ORR1A1 LTR MaLR 45 295 -51 2 662 189 107 0 0 chr13 10157061 10157089 -110127223 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 2 662 396 0 0 0 chr13 10157113 10157157 -110127155 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 662 852 169 197 6 chr13 10157862 10158040 -110126272 - B3 SINE B2 0 216 5 2 662 671 271 49 76 chr13 10158059 10158182 -110126130 - Lx8 LINE L1 -1 7472 7341 2 662 3983 18 0 0 chr13 10158182 10158633 -110125679 + L1Md_A LINE L1 6132 6582 0 2 662 671 271 49 76 chr13 10158633 10158813 -110125499 - Lx8 LINE L1 -133 7340 7177 2 662 738 90 5 63 chr13 10159035 10159224 -110125088 + GA-rich Low_complexity Low_complexity 2 179 0 2 662 591 154 0 0 chr13 10159277 10159394 -110124918 + (TG)n Simple_repeat Simple_repeat 1 117 0 2 662 26 0 0 0 chr13 10159901 10159927 -110124385 + AT_rich Low_complexity Low_complexity 1 26 0 2 662 579 257 12 75 chr13 10160654 10160814 -110123498 - RSINE1 SINE B4 0 165 16 2 662 426 69 0 0 chr13 10160888 10160946 -110123366 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 662 378 0 0 0 chr13 10161584 10161626 -110122686 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 662 420 37 0 0 chr13 10161626 10161680 -110122632 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 662 652 315 6 22 chr13 10161957 10162139 -110122173 + B4A SINE B4 21 199 -93 2 662 711 62 0 0 chr13 10162141 10162238 -110122074 + (TC)n Simple_repeat Simple_repeat 1 97 0 2 662 438 53 0 0 chr13 10162248 10162305 -110122007 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 662 870 242 20 20 chr13 10163212 10163414 -110120898 - B3 SINE B2 -13 203 2 2 662 395 288 71 9 chr13 10163415 10163527 -110120785 - B4A SINE B4 -64 228 110 3 662 946 26 0 0 chr13 10163601 10163718 -110120594 - L1Md_T LINE L1 -247 6335 6219 3 662 2030 41 0 0 chr13 10163719 10163965 -110120347 + L1Md_A LINE L1 6337 6582 0 3 662 231 299 65 0 chr13 10164038 10164148 -110120164 + ID4 SINE ID 2 120 -32 3 662 958 269 126 11 chr13 10164235 10164521 -110119791 - MTD LTR MaLR -100 319 1 3 662 622 218 6 90 chr13 10165373 10165529 -110118783 - B4A SINE B4 -1 291 149 3 662 360 0 0 0 chr13 10165699 10165739 -110118573 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 662 33 25 0 0 chr13 10166132 10166172 -110118140 + AT_rich Low_complexity Low_complexity 1 40 0 3 662 342 0 0 0 chr13 10166689 10166727 -110117585 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 662 908 261 19 66 chr13 10166747 10167018 -110117294 - B4 SINE B4 -34 258 1 3 662 313 289 175 32 chr13 10167497 10167651 -110116661 - B4A SINE B4 -114 178 3 3 662 23 0 0 0 chr13 10168381 10168404 -110115908 + AT_rich Low_complexity Low_complexity 1 23 0 3 662 268 232 10 10 chr13 10169217 10169317 -110114995 + GA-rich Low_complexity Low_complexity 2 101 0 3 662 363 280 54 49 chr13 10169772 10169956 -110114356 - L3 LINE CR1 -630 3859 3675 3 662 181 348 0 0 chr13 10169969 10170015 -110114297 + L3b LINE CR1 171 216 -266 3 662 255 294 34 84 chr13 10170042 10170161 -110114151 + MT2B LTR ERVL 151 263 -338 3 662 701 180 78 0 chr13 10170073 10170201 -110114111 + B1_Mur1 SINE Alu 12 149 0 3 662 591 60 0 0 chr13 10170486 10170570 -110113742 + (TG)n Simple_repeat Simple_repeat 2 85 0 3 662 2497 89 11 16 chr13 10172789 10172897 -110111415 + L1_Mus3 LINE L1 6264 6370 -268 3 662 324 0 0 0 chr13 10172897 10172933 -110111379 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 3 662 2497 89 11 16 chr13 10172933 10173199 -110111113 + L1_Mus3 LINE L1 6371 6636 -2 3 662 4401 16 0 0 chr13 10174024 10174517 -110109795 - MT2_Mm LTR ERVL 0 493 1 3 662 302 0 0 0 chr13 10174517 10174555 -110109757 - MERVL-int LTR ERVL 0 5485 5448 3 662 351 191 46 35 chr13 10174555 10174642 -110109670 - ORR1A3-int LTR MaLR -1323 640 553 3 662 35894 15 27 0 chr13 10174642 10179860 -110104452 - MERVL-int LTR ERVL -125 5360 1 3 662 4401 16 0 0 chr13 10179860 10180353 -110103959 - MT2_Mm LTR ERVL 0 493 1 3 662 745 340 69 33 chr13 10181037 10181311 -110103001 - B4A SINE B4 0 292 9 3 662 326 320 111 20 chr13 10181345 10181356 -110102956 - HAL1-3A_ME LINE L1 -414 2444 2435 3 662 607 0 25 13 chr13 10181356 10181435 -110102877 + (TTTC)n Simple_repeat Simple_repeat 1 80 0 3 662 326 320 111 20 chr13 10181435 10181576 -110102736 - HAL1-3A_ME LINE L1 -424 2434 2278 3 662 511 275 28 50 chr13 10181637 10181817 -110102495 - ID_B1 SINE B4 -59 233 68 3 662 873 258 51 29 chr13 10183391 10183666 -110100646 + B4A SINE B4 2 282 -10 3 662 897 281 26 41 chr13 10184235 10184506 -110099806 - MTEa LTR MaLR -9 370 104 3 662 778 115 0 0 chr13 10184807 10184920 -110099392 + URR1B DNA MER1_type 110 222 -3 3 662 233 377 29 14 chr13 10185158 10185298 -110099014 - L2 LINE L2 -646 2773 2632 3 662 722 281 78 53 chr13 10185359 10185641 -110098671 + B4 SINE B4 1 289 -3 3 662 515 184 0 29 chr13 10185660 10185800 -110098512 + (CATA)n Simple_repeat Simple_repeat 1 136 0 3 662 440 163 0 11 chr13 10185802 10185889 -110098423 + (TG)n Simple_repeat Simple_repeat 2 87 0 3 662 3550 63 28 2 chr13 10185892 10186351 -110097961 + MT2C_Mm LTR ERVL 5 475 0 3 662 513 0 0 0 chr13 10186351 10186408 -110097904 + (TG)n Simple_repeat Simple_repeat 1 57 0 3 662 594 75 0 0 chr13 10186409 10186489 -110097823 + (GGGA)n Simple_repeat Simple_repeat 3 82 0 3 662 553 261 284 4 chr13 10186882 10187161 -110097151 + Lx8 LINE L1 6961 7317 -156 3 662 24 0 0 0 chr13 10187170 10187194 -110097118 + AT_rich Low_complexity Low_complexity 1 24 0 3 662 572 346 41 38 chr13 10187636 10187927 -110096385 - B4A SINE B4 0 292 1 3 662 180 264 125 0 chr13 10188094 10188166 -110096146 + MIR SINE MIR 111 191 -71 3 662 384 103 0 0 chr13 10188370 10188428 -110095884 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 662 671 124 61 9 chr13 10188546 10188660 -110095652 - PB1D9 SINE Alu 0 120 1 3 662 319 194 27 27 chr13 10188903 10188977 -110095335 - Lx8 LINE L1 -364 7109 7036 3 662 500 219 8 0 chr13 10190058 10190186 -110094126 + (TG)n Simple_repeat Simple_repeat 1 129 0 3 662 490 284 49 49 chr13 10190648 10190833 -110093479 - B4A SINE B4 -56 236 52 3 662 457 211 16 0 chr13 10191550 10191678 -110092634 + (TA)n Simple_repeat Simple_repeat 2 131 0 3 662 801 96 0 0 chr13 10191678 10191803 -110092509 + (CA)n Simple_repeat Simple_repeat 2 126 0 3 662 503 298 0 0 chr13 10191866 10191987 -110092325 + RMER1B Other Other 592 712 -354 3 662 3292 208 32 202 chr13 10192178 10192275 -110092037 + RMER1C Other Other 53 152 -1190 3 662 2185 125 9 0 chr13 10192275 10192596 -110091716 + ORR1A2 LTR MaLR 4 327 0 3 662 3292 208 32 202 chr13 10192596 10194040 -110090272 + RMER1C Other Other 153 1331 -11 3 662 1050 211 22 5 chr13 10194638 10194862 -110089450 - Lx7 LINE L1 -889 6807 6580 3 662 3203 200 85 65 chr13 10194858 10195740 -110088572 + Lx7 LINE L1 6797 7696 0 3 662 197 171 0 68 chr13 10195796 10195840 -110088472 + L3 LINE CR1 3168 3208 -1281 3 662 2116 105 9 61 chr13 10197204 10197548 -110086764 + ORR1A3 LTR MaLR 1 326 0 3 662 426 258 90 0 chr13 10197710 10197865 -110086447 + L1MA4 LINE L1 5764 5932 -368 3 662 21 0 0 0 chr13 10198017 10198038 -110086274 + AT_rich Low_complexity Low_complexity 1 21 0 3 662 207 317 0 16 chr13 10198964 10199025 -110085287 + MIRb SINE MIR 199 258 -10 3 662 258 32 0 0 chr13 10199526 10199557 -110084755 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 662 400 331 76 6 chr13 10199606 10199764 -110084548 - B4A SINE B4 -75 217 49 3 662 336 200 0 0 chr13 10199764 10199834 -110084478 + T-rich Low_complexity Low_complexity 1 70 0 3 662 282 306 42 85 chr13 10200435 10200671 -110083641 + RLTR14 LTR ERV1 154 379 -3 3 662 343 311 27 80 chr13 10201749 10201861 -110082451 - B4 SINE B4 -1 291 186 3 662 293 0 27 0 chr13 10201885 10201922 -110082390 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 3 662 1278 85 0 0 chr13 10201925 10202102 -110082210 + (GGGAA)n Simple_repeat Simple_repeat 4 180 0 3 662 597 120 0 0 chr13 10202205 10202297 -110082015 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 662 686 238 56 7 chr13 10202299 10202443 -110081869 - B3A SINE B2 -46 152 2 3 662 280 320 12 49 chr13 10202672 10202754 -110081558 - ID4 SINE ID -2 81 3 3 662 396 40 0 0 chr13 10203784 10203834 -110080478 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 662 1008 25 0 0 chr13 10204230 10204349 -110079963 + (TC)n Simple_repeat Simple_repeat 2 120 0 3 662 579 227 45 8 chr13 10204368 10204501 -110079811 - B3A SINE B2 -60 138 1 3 662 4616 86 6 6 chr13 10204532 10205186 -110079126 - L1_Mus1 LINE L1 -1 6566 5913 3 662 1191 48 7 0 chr13 10205637 10205783 -110078529 + B1_Mus2 SINE Alu 1 147 0 3 662 294 125 0 0 chr13 10205801 10205849 -110078463 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 3 662 356 248 90 18 chr13 10208087 10208198 -110076114 - HAL1-3A_ME LINE L1 -764 2094 1976 3 662 992 117 5 8 chr13 10208343 10208498 -110075814 - L1Md_F LINE L1 -5801 718 577 3 662 881 45 0 0 chr13 10208499 10208609 -110075703 + L1Md_F2 LINE L1 5475 5584 -299 3 662 7774 54 7 14 chr13 10208611 10209603 -110074709 + L1Md_F2 LINE L1 5587 6571 -11 3 662 399 21 0 0 chr13 10209825 10209873 -110074439 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 662 476 176 7 0 chr13 10210039 10210175 -110074137 + CT-rich Low_complexity Low_complexity 2 138 0 3 662 371 304 153 65 chr13 10210407 10210636 -110073676 - B4A SINE B4 -41 251 3 3 662 685 66 0 0 chr13 10211407 10211513 -110072799 - L1_Mus3 LINE L1 0 6638 6533 3 662 1644 207 66 0 chr13 10211952 10212300 -110072012 + ORR1D1 LTR MaLR 1 371 -3 3 662 221 118 58 19 chr13 10213180 10213232 -110071080 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 3 662 228 149 0 0 chr13 10213232 10213279 -110071033 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 662 384 190 116 23 chr13 10213286 10213372 -110070940 - B3A SINE B2 -103 95 2 3 662 186 43 0 0 chr13 10213753 10213776 -110070536 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 662 690 216 22 0 chr13 10213776 10213910 -110070402 - B1_Mus2 SINE Alu -10 137 1 3 662 853 283 69 65 chr13 10214200 10214491 -110069821 - B4A SINE B4 0 292 1 3 662 399 241 0 0 chr13 10215338 10215351 -110068961 + (TG)n Simple_repeat Simple_repeat 1 13 0 3 662 261 0 0 0 chr13 10215351 10215380 -110068932 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 662 399 241 0 0 chr13 10215380 10215478 -110068834 + (TG)n Simple_repeat Simple_repeat 1 98 0 3 662 540 0 0 0 chr13 10215565 10215625 -110068687 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 662 211 278 14 14 chr13 10215895 10215968 -110068344 + (CA)n Simple_repeat Simple_repeat 1 73 0 3 662 270 375 28 7 chr13 10216704 10216849 -110067463 + RSINE1 SINE B4 3 150 -15 3 662 650 120 8 0 chr13 10216851 10216976 -110067336 + (CA)n Simple_repeat Simple_repeat 2 127 0 3 662 770 255 85 0 chr13 10217358 10217546 -110066766 + B3 SINE B2 2 205 -11 3 662 180 0 0 0 chr13 10217735 10217755 -110066557 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 3 662 315 117 9 0 chr13 10217755 10217813 -110066499 - B1_Mus2 SINE Alu -13 134 48 3 662 734 275 31 35 chr13 10217911 10218120 -110066192 - B3A SINE B2 -1 192 1 3 662 263 309 29 58 chr13 10218622 10218725 -110065587 - B1F SINE Alu -37 112 13 3 662 376 268 218 0 chr13 10218725 10218773 -110065539 - ID_B1 SINE B4 -34 190 7 3 662 216 0 0 0 chr13 10220028 10220052 -110064260 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 3 662 300 208 0 0 chr13 10220181 10220277 -110064035 + CT-rich Low_complexity Low_complexity 1 96 0 3 662 618 312 18 82 chr13 10220277 10220448 -110063864 - RSINE1 SINE B4 0 165 6 4 662 474 258 72 8 chr13 10220467 10220592 -110063720 - B1F1 SINE Alu -14 135 3 4 662 225 0 0 0 chr13 10220599 10220624 -110063688 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 662 764 40 40 0 chr13 10220624 10220723 -110063589 - B1_Mm SINE Alu -3 144 42 4 662 266 168 112 56 chr13 10220660 10220767 -110063545 - RLTR25B LTR ERVK -519 509 397 4 662 387 85 0 33 chr13 10220829 10220890 -110063422 - B1_Mur4 SINE Alu -90 60 2 4 662 216 0 0 0 chr13 10220895 10220919 -110063393 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 662 294 143 0 0 chr13 10221190 10221239 -110063073 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 662 185 382 44 35 chr13 10221646 10221760 -110062552 - MIR SINE MIR -64 198 84 4 662 747 168 168 5 chr13 10221859 10222068 -110062244 + Lx9 LINE L1 7400 7642 -2 4 662 2123 30 11 4 chr13 10222135 10222398 -110061914 + L1Md_F3 LINE L1 6320 6584 0 4 662 567 66 0 0 chr13 10222615 10222691 -110061621 + (TTTTC)n Simple_repeat Simple_repeat 3 78 0 4 662 544 327 18 46 chr13 10222691 10222909 -110061403 - ID_B1 SINE B4 -12 212 1 4 82 1109 259 135 11 chr13 10223325 10223696 -110060616 - MTD LTR MaLR -2 417 1 4 663 876 226 4 93 chr13 10224920 10225179 -110059133 + L1VL1 LINE L1 227 462 -5960 4 663 7539 105 27 5 chr13 10225160 10226401 -110057911 + MusHAL1 LINE L1 834 2101 -611 4 663 6249 90 80 8 chr13 10226402 10227483 -110056829 + L1_Mus3 LINE L1 5480 6635 -3 4 663 249 108 0 0 chr13 10227488 10227525 -110056787 + (A)n Simple_repeat Simple_repeat 1 37 0 4 663 541 337 100 1 chr13 10228980 10229207 -110055105 + B4 SINE B4 1 248 -44 4 663 3803 48 2 16 chr13 10229651 10230135 -110054177 - L1Md_F2 LINE L1 -2 6580 6104 4 663 1203 107 0 0 chr13 10230840 10231018 -110053294 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 4 663 532 297 45 51 chr13 10231183 10231577 -110052735 + MTEa LTR MaLR 1 379 0 4 663 473 290 93 7 chr13 10231616 10231755 -110052557 + B4 SINE B4 2 152 -140 4 663 537 245 0 0 chr13 10232463 10232557 -110051755 - RSINE1 SINE B4 -67 98 5 4 663 321 345 73 0 chr13 10233901 10234066 -110050246 - L1ME1 LINE L1 -22 6157 5981 4 663 1116 266 27 7 chr13 10235732 10236027 -110048285 + Lx8 LINE L1 6449 6749 -724 4 663 324 345 39 50 chr13 10236090 10236126 -110048186 - MIRb SINE MIR -27 241 206 4 663 1641 220 26 37 chr13 10236126 10236504 -110047808 - ORR1D1 LTR MaLR 0 374 1 4 663 324 345 39 50 chr13 10236504 10236647 -110047665 - MIRb SINE MIR -63 205 64 4 663 197 315 60 52 chr13 10236670 10236804 -110047508 - L2c LINE L2 -191 3196 3062 4 663 238 290 86 48 chr13 10237026 10237131 -110047181 + MIRc SINE MIR 51 159 -109 4 663 217 300 75 0 chr13 10237925 10238005 -110046307 - MER5B DNA MER1_type 0 178 93 4 663 369 0 0 0 chr13 10239853 10239894 -110044418 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 663 306 0 0 0 chr13 10239929 10239963 -110044349 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 663 792 298 19 43 chr13 10239979 10240235 -110044077 - B4 SINE B4 0 292 43 4 663 5978 121 17 12 chr13 10240918 10241815 -110042497 - Lx LINE L1 -2 6652 5752 4 663 280 381 64 72 chr13 10242254 10242489 -110041823 - MLT1F LTR MaLR -192 356 124 4 663 725 313 67 53 chr13 10242591 10242874 -110041438 + B4A SINE B4 1 287 -5 4 663 375 78 0 0 chr13 10243297 10243348 -110040964 + (TC)n Simple_repeat Simple_repeat 1 51 0 4 663 318 87 0 0 chr13 10243348 10243394 -110040918 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 663 434 290 62 72 chr13 10243411 10243619 -110040693 - B4A SINE B4 -18 274 69 4 663 188 34 0 33 chr13 10244233 10244263 -110040049 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 4 663 263 325 0 0 chr13 10244402 10244482 -110039830 - ID4_ SINE ID -1 82 3 4 663 1067 78 131 12 chr13 10244735 10244903 -110039409 - B2_Mm1a SINE B2 -4 189 2 4 663 875 81 59 0 chr13 10245074 10245210 -110039102 - L1_Mus2 LINE L1 -1 6565 6422 4 663 21 0 0 0 chr13 10245336 10245357 -110038955 + AT_rich Low_complexity Low_complexity 1 21 0 4 663 467 296 17 42 chr13 10245931 10246051 -110038261 + B1F SINE Alu 12 128 -21 4 663 248 346 0 10 chr13 10246071 10246173 -110038139 + GA-rich Low_complexity Low_complexity 5 105 0 4 663 201 330 75 37 chr13 10247530 10247637 -110036675 - MIRb SINE MIR -79 189 79 4 663 812 243 5 52 chr13 10247791 10247982 -110036330 + B3A SINE B2 1 182 -16 4 663 215 61 30 0 chr13 10248810 10248843 -110035469 + (CATA)n Simple_repeat Simple_repeat 2 35 0 4 663 1217 296 170 18 chr13 10249347 10249792 -110034520 + L1MC1 LINE L1 4103 4625 -1521 4 663 261 0 0 0 chr13 10249792 10249821 -110034491 + (TTA)n Simple_repeat Simple_repeat 1 29 0 4 663 1842 290 137 27 chr13 10249821 10250526 -110033786 + L1MC1 LINE L1 4626 5422 -911 4 663 544 281 63 15 chr13 10250526 10250732 -110033580 + B3 SINE B2 1 216 0 4 663 1842 271 37 55 chr13 10250732 10251427 -110032885 + L1MC1 LINE L1 5423 6111 -222 4 663 1103 233 140 6 chr13 10251543 10251892 -110032420 + Lx9 LINE L1 7087 7482 -162 4 663 243 0 0 0 chr13 10251896 10251923 -110032389 + (TATG)n Simple_repeat Simple_repeat 2 28 0 4 663 704 325 29 29 chr13 10251941 10252147 -110032165 + B4 SINE B4 81 286 -6 4 663 438 20 0 0 chr13 10252152 10252203 -110032109 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 663 387 287 66 39 chr13 10252203 10252384 -110031928 + L1MC1 LINE L1 6122 6307 -26 4 663 204 222 0 0 chr13 10252715 10252730 -110031582 + (CA)n Simple_repeat Simple_repeat 1 15 0 4 663 600 242 0 164 chr13 10252730 10252943 -110031369 + B3A SINE B2 4 181 -17 4 663 204 222 0 0 chr13 10252943 10252981 -110031331 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 663 4326 30 2 0 chr13 10253028 10253532 -110030780 + L1Md_A LINE L1 6076 6580 -2 4 663 1307 244 60 8 chr13 10254564 10254932 -110029380 + Lx8 LINE L1 6815 7201 -272 4 663 2320 87 9 6 chr13 10255048 10255372 -110028940 - L1_Mus2 LINE L1 0 6566 6242 4 663 1083 195 34 10 chr13 10256454 10256661 -110027651 - B3 SINE B2 -4 212 1 4 663 351 368 17 26 chr13 10256733 10256850 -110027462 - ID_B1 SINE B4 -107 117 2 4 663 364 240 120 0 chr13 10257545 10257695 -110026617 - Helitron1Nb_Mam RC Helitron -664 452 285 4 663 280 335 66 30 chr13 10257747 10257944 -110026368 - Helitron1Na_Mam RC Helitron -852 210 7 4 663 829 323 117 0 chr13 10258174 10258422 -110025890 + B4A SINE B4 14 290 -2 4 663 297 75 0 0 chr13 10260547 10260587 -110023725 + (T)n Simple_repeat Simple_repeat 1 40 0 4 663 1245 47 0 0 chr13 10260587 10260735 -110023577 - B1_Mus1 SINE Alu 0 148 1 4 663 399 350 120 52 chr13 10260741 10260991 -110023321 - MLT1G1 LTR MaLR -198 381 115 4 663 408 393 57 5 chr13 10262118 10262131 -110022181 - B4A SINE B4 -8 284 271 4 663 374 94 16 0 chr13 10262131 10262195 -110022117 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 663 408 393 57 5 chr13 10262195 10262393 -110021919 - B4A SINE B4 -22 270 63 4 663 868 279 49 36 chr13 10264076 10264381 -110019931 + Lx8 LINE L1 6697 7005 -468 4 663 197 337 44 44 chr13 10264791 10264881 -110019431 + MIRc SINE MIR 78 167 -101 4 663 432 0 0 0 chr13 10265090 10265138 -110019174 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 663 333 0 0 0 chr13 10265138 10265174 -110019138 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 663 223 218 35 52 chr13 10265185 10265243 -110019069 - RSINE1 SINE B4 -34 131 75 4 663 374 253 35 0 chr13 10265344 10265431 -110018881 - B4A SINE B4 -201 91 2 4 663 580 288 45 15 chr13 10265810 10266011 -110018301 - ID_B1 SINE B4 -16 208 2 4 663 447 235 42 25 chr13 10267935 10268053 -110016259 - RSINE1 SINE B4 -43 122 3 4 663 458 238 47 34 chr13 10268353 10268501 -110015811 + Tigger7 DNA MER2_type 2321 2470 -21 4 663 359 246 74 58 chr13 10269336 10269457 -110014855 - ID_B1 SINE B4 -13 211 89 4 663 3045 66 5 10 chr13 10269807 10270205 -110014107 + MTA_Mm LTR MaLR 1 396 0 4 663 374 326 56 14 chr13 10270735 10270878 -110013434 + RSINE1 SINE B4 3 151 -14 4 663 399 41 0 0 chr13 10270886 10270935 -110013377 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 663 1179 68 7 0 chr13 10271440 10271586 -110012726 - B1_Mus1 SINE Alu -1 147 1 4 663 772 308 50 50 chr13 10271774 10272051 -110012261 + B4A SINE B4 14 290 -2 4 663 873 311 100 62 chr13 10273536 10273926 -110010386 - MTD LTR MaLR -14 405 1 4 663 281 272 12 0 chr13 10274610 10274691 -110009621 - B1F SINE Alu 0 149 68 4 663 233 236 0 0 chr13 10274968 10275023 -110009289 + T-rich Low_complexity Low_complexity 1 55 0 4 663 23248 111 24 5 chr13 10275028 10281251 -110003061 - L1_Mus1 LINE L1 -1 6566 224 4 663 453 326 161 48 chr13 10282619 10282975 -110001337 + MER76 LTR ERVL 16 411 -280 4 663 240 331 141 87 chr13 10283034 10283219 -110001093 + MER76 LTR ERVL 495 689 -2 4 663 407 219 1 84 chr13 10283586 10283698 -110000614 - LTR16D1 LTR ERVL -9 666 534 4 663 1122 284 40 40 chr13 10284300 10284623 -109999689 - MTE2b LTR MaLR -56 323 1 4 663 486 0 0 0 chr13 10284951 10285005 -109999307 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 663 378 0 0 0 chr13 10285958 10286000 -109998312 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 663 1042 185 173 80 chr13 10286072 10286396 -109997916 + ORR1E LTR MaLR 4 357 -2 4 663 3333 148 29 31 chr13 10286409 10286666 -109997646 + RMER4B LTR ERVK 1 255 -330 4 663 414 0 0 0 chr13 10286666 10286712 -109997600 + (TTG)n Simple_repeat Simple_repeat 1 46 0 4 663 3333 148 29 31 chr13 10286712 10287040 -109997272 + RMER4B LTR ERVK 256 585 0 4 663 28 0 0 0 chr13 10287206 10287234 -109997078 + AT_rich Low_complexity Low_complexity 1 28 0 5 663 1155 68 0 0 chr13 10287469 10287616 -109996696 - B1_Mus1 SINE Alu 0 148 2 5 663 216 0 0 0 chr13 10288876 10288900 -109995412 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 663 456 89 56 0 chr13 10288969 10289059 -109995253 + (TTTTC)n Simple_repeat Simple_repeat 2 96 0 5 663 458 318 81 57 chr13 10289075 10289307 -109995005 + B4 SINE B4 63 272 -20 5 663 408 55 0 0 chr13 10289309 10289364 -109994948 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 663 591 336 83 43 chr13 10290047 10290373 -109993939 + ORR1E LTR MaLR 1 339 -20 5 663 236 100 25 0 chr13 10290605 10290645 -109993667 + RSINE1 SINE B4 3 43 -122 5 663 23 33 0 0 chr13 10291231 10291261 -109993051 + AT_rich Low_complexity Low_complexity 1 30 0 5 663 225 167 50 0 chr13 10291261 10291321 -109992991 + (TATATG)n Simple_repeat Simple_repeat 3 65 0 5 663 548 289 75 27 chr13 10291474 10291620 -109992692 - B3A SINE B2 -32 163 11 5 663 839 181 7 7 chr13 10291645 10291784 -109992528 - B1_Mur2 SINE Alu -6 143 5 5 663 222 236 40 27 chr13 10291849 10291923 -109992389 - ID4 SINE ID -6 77 3 5 663 1232 293 58 11 chr13 10292380 10292742 -109991570 - MTEb LTR MaLR 0 379 1 5 663 192 77 0 0 chr13 10292949 10292975 -109991337 + (CAG)n Simple_repeat Simple_repeat 2 27 0 5 663 630 336 13 56 chr13 10293010 10293313 -109990999 + B4 SINE B4 1 290 -2 5 663 180 0 0 0 chr13 10293586 10293606 -109990706 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 663 670 126 0 15 chr13 10293606 10293743 -109990569 + (TC)n Simple_repeat Simple_repeat 2 136 0 5 663 205 340 0 28 chr13 10294089 10294195 -109990117 + L2a LINE L2 3184 3286 -140 5 663 768 297 131 10 chr13 10294201 10294507 -109989805 + MER2 DNA MER2_type 2 344 -1 5 663 542 113 10 0 chr13 10295411 10295508 -109988804 + (GA)n Simple_repeat Simple_repeat 1 98 0 5 663 229 315 0 99 chr13 10295532 10295613 -109988699 + B3 SINE B2 49 121 -95 5 663 305 262 164 18 chr13 10295707 10295878 -109988434 + L1MD LINE L1 3076 3271 -2875 5 663 261 0 0 0 chr13 10295878 10295907 -109988405 + (GAAAA)n Simple_repeat Simple_repeat 3 31 0 5 663 312 277 0 0 chr13 10295907 10295972 -109988340 + B4 SINE B4 216 280 -12 5 663 192 40 0 0 chr13 10295974 10295999 -109988313 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 663 594 0 0 0 chr13 10295999 10296064 -109988248 + (GA)n Simple_repeat Simple_repeat 2 67 0 5 663 346 356 77 10 chr13 10296141 10296337 -109987975 - MIRb SINE MIR -9 259 51 5 663 450 225 0 0 chr13 10296643 10296754 -109987558 + (TG)n Simple_repeat Simple_repeat 2 112 0 5 663 539 331 150 54 chr13 10296973 10297346 -109986966 + MER21B LTR ERV1 7 415 -448 5 663 294 206 0 0 chr13 10297744 10297807 -109986505 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 5 663 230 56 0 27 chr13 10297807 10297844 -109986468 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 663 5172 54 3 0 chr13 10298779 10299451 -109984861 - L1Md_F2 LINE L1 -237 6345 5672 5 663 1791 63 4 8 chr13 10299451 10299691 -109984621 + L1Md_F2 LINE L1 6332 6570 -12 5 663 29 0 0 0 chr13 10300206 10300235 -109984077 + AT_rich Low_complexity Low_complexity 1 29 0 5 663 35596 28 2 7 chr13 10301136 10306341 -109977971 + L1Md_T LINE L1 415 5586 -297 5 663 8308 41 0 0 chr13 10306341 10307337 -109976975 + L1Md_T LINE L1 5587 6582 0 5 663 4297 48 24 4 chr13 10307522 10308063 -109976249 + L1Md_F2 LINE L1 6031 6582 0 5 663 357 24 0 0 chr13 10308615 10308657 -109975655 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 663 183 80 0 0 chr13 10308658 10308683 -109975629 + (TCCA)n Simple_repeat Simple_repeat 3 27 0 5 663 275 132 38 0 chr13 10308699 10308752 -109975560 + (TATG)n Simple_repeat Simple_repeat 2 56 0 5 663 194 313 24 24 chr13 10309056 10309141 -109975171 - L2c LINE L2 -60 3327 3243 5 663 301 378 82 10 chr13 10309161 10309367 -109974945 + L1M5 LINE L1 5502 5722 -402 5 663 511 343 90 0 chr13 10309478 10309644 -109974668 + B3A SINE B2 1 181 -17 5 663 216 0 0 0 chr13 10309645 10309669 -109974643 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 663 392 282 63 16 chr13 10309980 10310171 -109974141 - L1_Rod LINE L1 -3722 2125 1926 5 663 29 28 0 0 chr13 10310835 10310871 -109973441 + AT_rich Low_complexity Low_complexity 1 36 0 5 663 528 312 66 66 chr13 10311505 10311718 -109972594 + B4A SINE B4 2 214 -78 5 663 426 312 83 19 chr13 10312006 10312215 -109972097 + L1M2 LINE L1 5366 5589 -708 5 663 963 162 122 29 chr13 10312607 10312811 -109971501 - URR1A DNA MER1_type -3 223 1 5 663 468 308 7 14 chr13 10313965 10314110 -109970202 + Lx8 LINE L1 7099 7242 -231 5 663 1672 196 99 0 chr13 10314183 10314525 -109969787 + MT2A LTR ERVL 1 376 -157 5 663 432 0 0 0 chr13 10314541 10314589 -109969723 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 663 387 0 0 0 chr13 10315140 10315183 -109969129 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 5 663 388 252 0 64 chr13 10316579 10316689 -109967623 + B1F SINE Alu 39 141 -8 5 663 337 202 12 71 chr13 10316614 10316699 -109967613 + ID_B1 SINE B4 145 224 0 5 663 307 236 0 0 chr13 10318370 10318425 -109965887 - HAL1-3A_ME LINE L1 -846 2012 1958 5 663 243 0 0 0 chr13 10318478 10318505 -109965807 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 663 467 253 17 57 chr13 10318511 10318687 -109965625 - L1MA4 LINE L1 -377 5923 5755 5 663 1224 92 0 11 chr13 10319329 10319515 -109964797 + L1Md_F2 LINE L1 6399 6582 0 5 663 422 36 0 18 chr13 10319825 10319882 -109964430 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 663 807 327 22 15 chr13 10321145 10321415 -109962897 + B4 SINE B4 21 292 0 5 663 188 148 35 47 chr13 10321435 10321520 -109962792 + (CAGAGA)n Simple_repeat Simple_repeat 5 88 0 5 663 285 215 14 71 chr13 10323008 10323078 -109961234 + ID4_ SINE ID 2 67 -16 5 663 431 336 106 77 chr13 10325981 10326255 -109958057 - B4A SINE B4 0 292 11 5 663 1484 252 53 35 chr13 10326721 10327116 -109957196 + MTD LTR MaLR 18 419 0 5 663 318 148 0 0 chr13 10327150 10327204 -109957108 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 5 663 205 184 0 0 chr13 10327206 10327244 -109957068 + (CATA)n Simple_repeat Simple_repeat 3 40 0 5 663 3977 64 26 8 chr13 10327398 10327932 -109956380 - L1Md_F2 LINE L1 -12 6570 6027 5 663 2350 104 3 0 chr13 10329196 10329514 -109954798 + ORR1A2 LTR MaLR 1 319 -8 5 663 369 0 0 0 chr13 10330022 10330063 -109954249 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 663 510 317 4 44 chr13 10330065 10330277 -109954035 - B3A SINE B2 -14 202 1 5 663 510 265 93 114 chr13 10330377 10330744 -109953568 + ORR1E LTR MaLR 1 359 0 5 663 780 190 14 27 chr13 10330880 10331026 -109953286 + B1_Mur2 SINE Alu 6 149 0 5 663 222 91 0 0 chr13 10331038 10331071 -109953241 + (CAA)n Simple_repeat Simple_repeat 2 34 0 5 663 661 346 43 50 chr13 10332661 10332941 -109951371 + B4A SINE B4 13 290 -2 5 663 621 187 368 0 chr13 10334836 10334991 -109949321 - B3 SINE B2 0 216 5 5 663 310 265 187 32 chr13 10335221 10335467 -109948845 - Lx9 LINE L1 0 7644 7361 5 663 359 280 266 0 chr13 10335505 10335648 -109948664 - ID_B1 SINE B4 -42 182 2 5 663 397 343 28 44 chr13 10336042 10336222 -109948090 - MER106A DNA MER1_type -58 178 2 5 663 380 351 10 60 chr13 10336847 10337047 -109947265 + MER63A DNA AcHobo 18 207 -3 5 663 331 98 20 0 chr13 10337143 10337194 -109947118 - HAL1-3A_ME LINE L1 -831 2027 1976 5 663 438 101 0 0 chr13 10337194 10337263 -109947049 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 663 241 297 14 0 chr13 10337735 10337809 -109946503 + HAL1 LINE L1 1814 1888 -619 5 663 232 270 77 31 chr13 10338094 10338224 -109946088 + HAL1 LINE L1 2261 2396 -111 5 663 853 347 7 15 chr13 10338736 10339008 -109945304 + B4 SINE B4 3 272 -20 5 663 351 0 0 0 chr13 10339104 10339143 -109945169 + (TC)n Simple_repeat Simple_repeat 1 39 0 5 663 22 0 0 0 chr13 10339960 10339982 -109944330 + AT_rich Low_complexity Low_complexity 1 22 0 5 663 304 350 10 0 chr13 10341060 10341157 -109943155 + PB1D10 SINE Alu 14 111 -6 5 663 211 319 14 0 chr13 10341464 10341536 -109942776 - ID SINE ID -150 74 2 5 663 527 310 7 44 chr13 10342209 10342344 -109941968 + ID_B1 SINE B4 39 168 -56 5 663 441 266 38 14 chr13 10342269 10342400 -109941912 + PB1D10 SINE Alu 13 148 -1 5 663 2437 76 6 0 chr13 10342955 10343272 -109941040 + ORR1A2 LTR MaLR 1 319 -8 5 663 397 237 0 0 chr13 10344598 10344674 -109939638 + ID4_ SINE ID 2 77 -6 5 663 420 20 0 0 chr13 10344679 10344728 -109939584 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 663 234 0 0 0 chr13 10344917 10344943 -109939369 + (T)n Simple_repeat Simple_repeat 1 26 0 5 663 1064 249 103 45 chr13 10345291 10345649 -109938663 + MTEa LTR MaLR 1 379 0 5 663 351 0 0 0 chr13 10346219 10346258 -109938054 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 663 200 200 0 0 chr13 10346258 10346293 -109938019 + GA-rich Low_complexity Low_complexity 2 36 0 5 663 858 255 140 21 chr13 10346340 10346665 -109937647 + L1MA8 LINE L1 4790 5147 -996 5 663 195 42 0 0 chr13 10346665 10346689 -109937623 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5 663 858 255 140 21 chr13 10346689 10346792 -109937520 + L1MA8 LINE L1 5148 5268 -875 5 663 1339 277 103 26 chr13 10346829 10347256 -109937056 + L1MA8 LINE L1 5339 5797 -494 5 663 369 0 0 0 chr13 10347256 10347297 -109937015 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 663 1339 277 103 26 chr13 10347297 10347609 -109936703 + L1MA8 LINE L1 5798 6135 -156 5 663 22 0 0 0 chr13 10348024 10348046 -109936266 + AT_rich Low_complexity Low_complexity 1 22 0 5 663 263 340 86 13 chr13 10348100 10348252 -109936060 - L4 LINE RTE -180 1849 1687 6 663 406 328 0 17 chr13 10348544 10348662 -109935650 - PB1 SINE Alu 0 127 12 6 663 590 241 64 17 chr13 10348802 10348967 -109935345 + B3 SINE B2 1 162 -33 6 663 198 0 0 0 chr13 10348967 10348989 -109935323 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 663 495 241 59 70 chr13 10348989 10349010 -109935302 + B2_Mm2 SINE B2 163 185 -10 6 663 364 304 19 29 chr13 10350623 10350728 -109933584 + MER5A1 DNA MER1_type 49 152 -14 6 663 1364 232 69 34 chr13 10351416 10351812 -109932500 + MTE2b LTR MaLR 6 379 0 6 663 234 287 177 43 chr13 10351839 10352003 -109932309 + MLT1D LTR MaLR 10 195 -310 6 663 324 0 0 0 chr13 10352009 10352045 -109932267 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 663 21 0 0 0 chr13 10353255 10353276 -109931036 + AT_rich Low_complexity Low_complexity 1 21 0 6 664 405 141 0 0 chr13 10355323 10355394 -109928918 + (TC)n Simple_repeat Simple_repeat 2 72 0 6 664 572 226 71 200 chr13 10355468 10355723 -109928589 + B4 SINE B4 1 222 -70 6 664 351 0 0 0 chr13 10356396 10356435 -109927877 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 664 279 0 0 0 chr13 10358348 10358379 -109925933 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 664 195 100 0 0 chr13 10360117 10360147 -109924165 + (TCC)n Simple_repeat Simple_repeat 3 32 0 6 664 811 174 6 6 chr13 10360800 10360979 -109923333 + CT-rich Low_complexity Low_complexity 2 180 0 6 664 411 250 20 20 chr13 10361306 10361408 -109922904 + PB1D10 SINE Alu 15 116 -1 6 664 772 249 62 5 chr13 10361963 10362173 -109922139 + ID_B1 SINE B4 1 222 -2 6 664 754 276 62 4 chr13 10362186 10362412 -109921900 + MER2 DNA MER2_type 97 335 -10 6 664 729 129 0 0 chr13 10362711 10362827 -109921485 + (TCC)n Simple_repeat Simple_repeat 2 117 0 6 664 21 0 0 0 chr13 10362827 10362848 -109921464 + AT_rich Low_complexity Low_complexity 1 21 0 6 664 234 81 0 0 chr13 10362975 10363012 -109921300 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 6 664 255 31 0 0 chr13 10363013 10363045 -109921267 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 664 762 223 2 22 chr13 10364240 10364409 -109919903 + B3A SINE B2 2 159 -36 6 664 333 0 0 0 chr13 10364409 10364446 -109919866 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 664 517 244 41 86 chr13 10364446 10364473 -109919839 + B2_Mm2 SINE B2 160 188 -7 6 664 254 324 0 19 chr13 10364684 10364791 -109919521 + BC1_Mm scRNA scRNA 1 105 -47 6 664 446 280 122 62 chr13 10364888 10365208 -109919104 + L1MEg LINE L1 1157 1495 -4705 6 664 363 291 146 47 chr13 10365372 10365625 -109918687 + B4A SINE B4 1 278 -14 6 664 329 296 56 0 chr13 10365762 10365887 -109918425 + L1MEg LINE L1 1914 2045 -4155 6 664 385 351 23 8 chr13 10365887 10366019 -109918293 + B1F SINE Alu 3 136 -13 6 664 248 250 0 0 chr13 10366030 10366074 -109918238 + ID4 SINE ID 26 69 -14 6 664 233 294 0 29 chr13 10366074 10366094 -109918218 + ID SINE ID 35 89 -135 6 664 533 270 146 0 chr13 10366192 10366370 -109917942 + ID_B1 SINE B4 2 205 -19 6 664 327 49 0 0 chr13 10366376 10366417 -109917895 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 6 664 559 270 0 0 chr13 10366665 10366776 -109917536 - B3 SINE B2 -105 111 1 6 664 324 48 0 0 chr13 10366930 10366972 -109917340 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 664 638 355 7 40 chr13 10366974 10367250 -109917062 - B4A SINE B4 -24 268 2 6 664 579 98 0 0 chr13 10367357 10367449 -109916863 + (TTCC)n Simple_repeat Simple_repeat 2 93 0 6 664 224 329 0 0 chr13 10367930 10368000 -109916312 + B4A SINE B4 1 70 -222 6 664 459 324 5 57 chr13 10368015 10368208 -109916104 + B3A SINE B2 1 183 -15 6 664 197 132 0 26 chr13 10368225 10368264 -109916048 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 6 664 21 0 0 0 chr13 10368279 10368300 -109916012 + AT_rich Low_complexity Low_complexity 1 21 0 6 664 441 81 0 0 chr13 10368496 10368558 -109915754 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 6 664 537 182 15 15 chr13 10369436 10369570 -109914742 + C-rich Low_complexity Low_complexity 3 136 0 6 664 472 284 51 22 chr13 10369570 10369707 -109914605 - ID_B1 SINE B4 0 224 84 6 664 809 246 64 5 chr13 10369797 10370001 -109914311 - B3 SINE B2 0 216 1 6 664 22 0 0 0 chr13 10370006 10370028 -109914284 + AT_rich Low_complexity Low_complexity 1 22 0 6 664 313 194 21 43 chr13 10370200 10370340 -109913972 + (TTATA)n Simple_repeat Simple_repeat 5 141 0 6 664 337 266 59 50 chr13 10370704 10370823 -109913489 - B1F SINE Alu -28 121 2 6 664 649 295 7 0 chr13 10370823 10370886 -109913426 - B4 SINE B4 -205 87 24 6 664 564 15 0 0 chr13 10370908 10370973 -109913339 + (TA)n Simple_repeat Simple_repeat 1 65 0 6 664 233 243 79 97 chr13 10371359 10371473 -109912839 - PB1D10 SINE Alu -3 114 3 6 664 403 223 27 7 chr13 10372054 10372203 -109912109 + CT-rich Low_complexity Low_complexity 2 153 0 6 664 216 287 102 65 chr13 10373702 10373810 -109910502 + B1F1 SINE Alu 9 120 -29 6 664 1412 40 0 0 chr13 10374656 10374830 -109909482 + L1Md_T LINE L1 6409 6582 0 6 664 762 190 6 6 chr13 10374835 10374994 -109909318 - RMER17C LTR ERVK -249 161 3 6 664 1828 182 26 42 chr13 10374996 10375426 -109908886 + RCHARR1 DNA MER1_type 419 841 -133 6 664 1984 158 20 35 chr13 10375429 10375771 -109908541 - Lx4A LINE L1 -2 7056 6720 6 664 270 331 158 0 chr13 10375851 10375990 -109908322 + RSINE1 SINE B4 3 163 -2 6 664 422 218 99 63 chr13 10376049 10376191 -109908121 - RMER30 DNA MER1_type -49 153 7 6 664 409 292 121 28 chr13 10377011 10377062 -109907250 + B3A SINE B2 1 51 -147 6 664 360 0 0 0 chr13 10377062 10377102 -109907210 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 6 664 409 292 121 28 chr13 10377102 10377191 -109907121 + B3A SINE B2 52 153 -45 6 664 582 114 0 0 chr13 10377575 10377663 -109906649 + (TC)n Simple_repeat Simple_repeat 1 88 0 6 664 205 273 0 35 chr13 10377874 10377931 -109906381 + L3 LINE CR1 2103 2157 -2332 6 664 694 292 14 13 chr13 10378761 10378948 -109905364 - B3A SINE B2 -5 211 23 6 664 414 57 0 0 chr13 10380015 10380068 -109904244 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 6 664 263 148 37 0 chr13 10380169 10380223 -109904089 + GA-rich Low_complexity Low_complexity 4 59 0 6 664 227 259 23 23 chr13 10380236 10380323 -109903989 + (CAGA)n Simple_repeat Simple_repeat 2 88 0 6 664 267 103 0 0 chr13 10380324 10380363 -109903949 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 6 664 183 100 0 0 chr13 10380642 10380672 -109903640 + (TAA)n Simple_repeat Simple_repeat 2 31 0 6 664 198 0 0 0 chr13 10380784 10380806 -109903506 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 664 376 120 102 57 chr13 10381104 10381170 -109903142 - ORR1D1 LTR MaLR 0 374 305 6 664 1043 156 64 36 chr13 10381170 10381389 -109902923 - URR1B DNA MER1_type 0 225 1 6 664 1175 192 109 32 chr13 10381391 10381676 -109902636 - ORR1D1 LTR MaLR -67 307 1 6 664 419 311 29 36 chr13 10381855 10381992 -109902320 - B1F1 SINE Alu -12 137 2 6 664 1238 177 18 0 chr13 10382334 10382554 -109901758 + URR1B DNA MER1_type 2 225 0 6 664 200 360 40 0 chr13 10383390 10383465 -109900847 - L2a LINE L2 -360 3066 2989 6 664 354 23 0 0 chr13 10383832 10383875 -109900437 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 664 366 280 220 0 chr13 10383893 10384025 -109900287 - B4 SINE B4 -4 288 128 6 664 240 268 0 18 chr13 10385041 10385098 -109899214 + GA-rich Low_complexity Low_complexity 1 56 0 6 664 228 67 0 0 chr13 10385154 10385184 -109899128 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 664 256 287 168 44 chr13 10385299 10385412 -109898900 - ID_B1 SINE B4 -67 157 31 6 664 293 296 34 47 chr13 10385559 10385708 -109898604 + L2 LINE L2 2033 2179 -1240 6 664 194 343 55 37 chr13 10385748 10385857 -109898455 + L2 LINE L2 2412 2522 -897 6 664 7707 42 11 0 chr13 10386318 10387635 -109896677 - L1Md_F2 LINE L1 0 6582 5251 6 664 230 314 57 29 chr13 10387643 10387748 -109896564 - MER33 DNA MER1_type -216 108 1 6 664 464 236 55 8 chr13 10388165 10388293 -109896019 + RMER15 LTR ERVL 397 530 -45 6 664 342 326 110 22 chr13 10388974 10389138 -109895174 + B3A SINE B2 1 180 -18 6 664 288 0 0 0 chr13 10389138 10389170 -109895142 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 664 342 326 110 22 chr13 10389170 10389187 -109895125 + B3A SINE B2 181 198 0 6 664 475 274 49 87 chr13 10389412 10389596 -109894716 + B4 SINE B4 22 198 -94 6 664 201 147 0 0 chr13 10389629 10389663 -109894649 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 664 381 306 115 27 chr13 10389670 10389787 -109894525 - RSINE1 SINE B4 -2 163 33 6 664 381 75 0 0 chr13 10389787 10389840 -109894472 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 664 381 306 115 27 chr13 10389840 10389870 -109894442 - RSINE1 SINE B4 -133 32 3 6 664 268 32 29 87 chr13 10390030 10390099 -109894213 + (TTTTG)n Simple_repeat Simple_repeat 2 66 0 6 664 333 0 0 0 chr13 10390989 10391026 -109893286 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 664 885 315 35 11 chr13 10391086 10391346 -109892966 - B4A SINE B4 -26 266 1 6 664 425 276 69 6 chr13 10391476 10391674 -109892638 - L1MA4 LINE L1 -372 5928 5705 6 664 360 0 0 0 chr13 10392025 10392065 -109892247 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 664 21 71 0 0 chr13 10392306 10392348 -109891964 + AT_rich Low_complexity Low_complexity 1 42 0 6 664 1373 233 40 118 chr13 10392458 10392857 -109891455 + MTE2a LTR MaLR 12 379 0 6 664 411 212 62 12 chr13 10392911 10392992 -109891320 + PB1D10 SINE Alu 1 85 -32 6 664 306 229 28 28 chr13 10394661 10394733 -109889579 + MLT1H LTR MaLR 454 525 -24 6 664 480 344 0 24 chr13 10394892 10395059 -109889253 + RSINE1 SINE B4 3 165 0 6 664 252 0 0 0 chr13 10395070 10395098 -109889214 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 6 664 609 249 68 78 chr13 10395110 10395150 -109889162 + B3 SINE B2 1 36 -180 7 664 624 263 0 0 chr13 10395150 10395287 -109889025 + B1_Mur1 SINE Alu 2 138 -11 7 664 303 28 0 0 chr13 10395287 10395323 -109888989 + (CAGA)n Simple_repeat Simple_repeat 4 39 0 7 664 609 249 68 78 chr13 10395323 10395486 -109888826 + B3 SINE B2 37 202 -14 7 664 30 0 0 0 chr13 10395486 10395516 -109888796 + AT_rich Low_complexity Low_complexity 1 30 0 7 664 682 117 17 0 chr13 10396326 10396446 -109887866 + (TG)n Simple_repeat Simple_repeat 1 122 0 7 664 27 49 0 0 chr13 10397939 10397980 -109886332 + AT_rich Low_complexity Low_complexity 1 41 0 7 664 783 274 29 0 chr13 10398497 10398701 -109885611 - B3 SINE B2 -1 215 6 7 664 320 339 73 0 chr13 10398706 10398830 -109885482 - B4A SINE B4 -151 141 9 7 664 1705 217 39 140 chr13 10398830 10399061 -109885251 + RLTR11A2 LTR ERVK 1 217 -310 7 664 324 64 0 0 chr13 10399061 10399108 -109885204 + (CAGAGA)n Simple_repeat Simple_repeat 4 50 0 7 664 1705 217 39 140 chr13 10399108 10399461 -109884851 + RLTR11A2 LTR ERVK 218 526 -1 7 664 203 224 0 20 chr13 10399471 10399521 -109884791 + (TATATG)n Simple_repeat Simple_repeat 1 49 0 7 664 11265 67 0 5 chr13 10400956 10403212 -109881100 - L1Md_F2 LINE L1 -3 6579 4335 7 664 2623 93 39 5 chr13 10403491 10403878 -109880434 - L1_Mus1 LINE L1 0 6567 6168 7 664 579 323 59 59 chr13 10404018 10404222 -109880090 + B3A SINE B2 1 204 -12 7 664 207 0 0 0 chr13 10404247 10404270 -109880042 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 664 471 63 0 0 chr13 10405620 10405683 -109878629 + (TA)n Simple_repeat Simple_repeat 2 64 0 7 664 606 351 88 8 chr13 10405683 10405933 -109878379 - B4A SINE B4 -17 275 6 7 664 279 189 19 0 chr13 10406925 10406978 -109877334 - ORR1C1 LTR MaLR 0 378 325 7 664 288 77 0 0 chr13 10406978 10407017 -109877295 + (TCC)n Simple_repeat Simple_repeat 3 41 0 7 664 404 55 0 0 chr13 10407060 10407115 -109877197 + L1_Mus1 LINE L1 6261 6315 -252 7 664 1763 150 41 72 chr13 10407115 10407460 -109876852 - ORR1C1 LTR MaLR -44 334 1 7 664 452 137 10 0 chr13 10407551 10407653 -109876659 + (CA)n Simple_repeat Simple_repeat 2 104 0 7 664 466 287 82 11 chr13 10407789 10407931 -109876381 + B3A SINE B2 2 155 -43 7 664 393 22 0 0 chr13 10407931 10407977 -109876335 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 664 466 287 82 11 chr13 10407977 10408017 -109876295 + B3A SINE B2 156 197 -1 7 664 1224 268 67 20 chr13 10408234 10408577 -109875735 + ORR1E LTR MaLR 1 359 0 7 664 889 286 74 8 chr13 10408616 10408873 -109875439 - B4 SINE B4 -15 277 4 7 664 268 358 0 0 chr13 10408924 10409005 -109875307 + ID4_ SINE ID 3 83 0 7 664 760 203 153 14 chr13 10409737 10409952 -109874360 + RMER4B LTR ERVK 18 262 -323 7 664 761 275 109 45 chr13 10411410 10411694 -109872618 + MTE2a LTR MaLR 80 379 0 7 664 307 253 43 32 chr13 10412061 10412155 -109872157 + PB1D10 SINE Alu 9 103 -14 7 664 1095 51 0 0 chr13 10412186 10412324 -109871988 + (GA)n Simple_repeat Simple_repeat 1 138 0 7 664 469 331 7 26 chr13 10412356 10412508 -109871804 + MLT1C LTR MaLR 317 465 -2 7 664 262 307 176 51 chr13 10412690 10412877 -109871435 - MIRb SINE MIR -56 206 4 7 664 1115 246 85 106 chr13 10412949 10413336 -109870976 - MTE2b LTR MaLR 0 379 1 7 664 231 241 0 65 chr13 10413372 10413401 -109870911 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 7 664 273 57 0 0 chr13 10413401 10413436 -109870876 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 7 664 231 241 0 65 chr13 10413436 10413480 -109870832 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 7 664 203 0 37 0 chr13 10413480 10413507 -109870805 + (TATAA)n Simple_repeat Simple_repeat 5 32 0 7 664 231 241 0 65 chr13 10413507 10413525 -109870787 + (CATATA)n Simple_repeat Simple_repeat 6 21 0 7 664 552 322 23 34 chr13 10413585 10413762 -109870550 + B4 SINE B4 91 265 -27 7 664 441 148 0 0 chr13 10413806 10413887 -109870425 + (CA)n Simple_repeat Simple_repeat 1 81 0 7 664 928 301 83 33 chr13 10414273 10414610 -109869702 - ORR1E LTR MaLR -2 357 4 7 664 239 168 40 85 chr13 10414761 10414837 -109869475 + MLT2C2 LTR ERVL 487 567 0 7 664 532 301 82 64 chr13 10414971 10415521 -109868791 - L1MCa LINE L1 -5930 578 19 7 664 1194 56 0 0 chr13 10416811 10416954 -109867358 + B1_Mus2 SINE Alu 5 147 0 7 664 3536 180 20 19 chr13 10417075 10417710 -109866602 + RLTR17 LTR ERVK 57 692 0 7 664 195 295 91 111 chr13 10418649 10418748 -109865564 - MER5A DNA MER1_type -22 167 71 7 664 1053 243 88 27 chr13 10418992 10419288 -109865024 + ORR1E LTR MaLR 3 316 -43 7 664 340 182 11 11 chr13 10419288 10419377 -109864935 + CT-rich Low_complexity Low_complexity 2 90 0 7 664 782 280 95 8 chr13 10419437 10419700 -109864612 - B4A SINE B4 -6 286 1 7 664 678 352 206 7 chr13 10419893 10420334 -109863978 + MTE-int LTR MaLR 778 1306 -274 7 664 584 244 45 77 chr13 10420337 10420559 -109863753 - B3 SINE B2 0 216 2 7 664 195 42 0 0 chr13 10420653 10420677 -109863635 + (T)n Simple_repeat Simple_repeat 1 24 0 7 664 5861 69 0 0 chr13 10420840 10421592 -109862720 - L1Md_T LINE L1 -2 6580 5829 7 664 357 385 22 6 chr13 10421611 10421791 -109862521 + MTE-int LTR MaLR 1363 1545 -35 7 664 537 16 0 0 chr13 10422274 10422336 -109861976 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 664 33353 50 2 0 chr13 10423228 10428587 -109855725 + L1Md_T LINE L1 219 5586 -297 7 664 8302 41 0 0 chr13 10428587 10429581 -109854731 + L1Md_T LINE L1 5587 6580 -2 7 664 19541 64 3 1 chr13 10429581 10432250 -109852062 + L1Md_F2 LINE L1 2912 5585 -298 7 664 8053 51 1 1 chr13 10432251 10433246 -109851066 + L1Md_F2 LINE L1 5587 6581 -1 7 664 203 308 87 71 chr13 10433279 10433475 -109850837 + L2a LINE L2 3107 3305 -121 7 664 687 289 23 90 chr13 10433490 10433923 -109850389 + L1MA5A LINE L1 5527 5930 -367 7 664 248 77 0 25 chr13 10434206 10434246 -109850066 + (TTA)n Simple_repeat Simple_repeat 1 39 0 7 664 204 296 94 107 chr13 10435124 10435283 -109849029 + L2 LINE L2 2371 2527 -892 7 664 702 267 52 43 chr13 10435644 10435860 -109848452 - B3A SINE B2 0 216 2 7 664 678 284 92 52 chr13 10436821 10437170 -109847142 - MTEb LTR MaLR -13 366 4 7 664 486 0 0 0 chr13 10437785 10437839 -109846473 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 664 717 277 31 26 chr13 10438481 10438674 -109845638 - B3A SINE B2 0 198 5 7 664 497 301 79 65 chr13 10440790 10441171 -109843141 - L2a LINE L2 -297 3129 2718 7 664 229 298 146 55 chr13 10441533 10441732 -109842580 + ORR1D1 LTR MaLR 7 223 -151 7 664 215 31 31 0 chr13 10442278 10442310 -109842002 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 664 387 0 0 0 chr13 10442314 10442357 -109841955 + (TA)n Simple_repeat Simple_repeat 2 44 0 7 664 764 65 9 0 chr13 10442375 10442482 -109841830 + (TAGA)n Simple_repeat Simple_repeat 1 108 0 7 664 940 267 70 4 chr13 10442485 10442741 -109841571 - B4A SINE B4 -18 274 2 7 664 942 230 37 5 chr13 10443220 10443408 -109840904 - B3 SINE B2 -21 195 2 7 664 223 366 65 0 chr13 10443856 10443979 -109840333 + MIR3 SINE MIR 76 206 -2 7 664 346 287 108 0 chr13 10445989 10446118 -109838194 - MLT1A1 LTR MaLR -265 143 1 7 664 185 0 40 0 chr13 10446202 10446227 -109838085 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 664 454 88 25 12 chr13 10446666 10446747 -109837565 + (CAAAA)n Simple_repeat Simple_repeat 3 84 0 7 664 333 355 59 71 chr13 10447111 10447448 -109836864 - ORR1E LTR MaLR -4 355 23 7 664 635 259 14 34 chr13 10447589 10447737 -109836575 - B3 SINE B2 -11 205 61 7 664 317 290 88 47 chr13 10448154 10448346 -109835966 + L1MCa LINE L1 1304 1503 -5005 7 664 611 308 20 25 chr13 10448443 10448643 -109835669 + MTD LTR MaLR 5 203 -216 7 664 259 368 137 48 chr13 10449007 10449121 -109835191 - FordPrefect DNA Tip100 -874 809 697 7 664 1296 51 0 0 chr13 10449121 10449298 -109835014 + (TG)n Simple_repeat Simple_repeat 1 177 0 7 664 259 368 137 48 chr13 10449298 10449323 -109834989 - FordPrefect DNA Tip100 -987 696 672 7 664 1338 45 0 0 chr13 10449323 10449501 -109834811 + (TG)n Simple_repeat Simple_repeat 2 179 0 7 664 259 368 137 48 chr13 10449501 10449899 -109834413 - FordPrefect DNA Tip100 -1012 671 223 7 664 267 245 255 14 chr13 10450588 10450729 -109833583 - Lx9 LINE L1 -157 7487 7313 7 664 21 0 0 0 chr13 10450926 10450947 -109833365 + AT_rich Low_complexity Low_complexity 1 21 0 7 664 301 294 46 23 chr13 10451296 10451383 -109832929 - HAL1-3A_ME LINE L1 -795 2063 1975 7 664 259 207 20 196 chr13 10451413 10451428 -109832884 - RSINE1 SINE B4 0 165 152 7 664 225 0 0 0 chr13 10451428 10451453 -109832859 + (GA)n Simple_repeat Simple_repeat 1 25 0 7 664 387 279 50 107 chr13 10451453 10451723 -109832589 - B4A SINE B4 -22 270 35 7 664 1230 84 0 11 chr13 10451901 10452081 -109832231 + L1_Mus1 LINE L1 6390 6567 0 7 664 268 77 19 19 chr13 10452822 10452875 -109831437 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 7 664 259 197 0 90 chr13 10452932 10453010 -109831302 + Lx2 LINE L1 6902 6972 -25 7 664 206 167 37 0 chr13 10453405 10453459 -109830853 + (TATG)n Simple_repeat Simple_repeat 3 58 0 7 664 486 206 178 24 chr13 10454667 10454836 -109829476 + B3A SINE B2 2 196 -2 7 664 240 35 0 0 chr13 10454849 10454878 -109829434 + (CAA)n Simple_repeat Simple_repeat 3 31 0 7 664 206 128 0 25 chr13 10455406 10455446 -109828866 + (TTA)n Simple_repeat Simple_repeat 2 40 0 7 664 280 387 35 35 chr13 10455447 10455589 -109828723 - B4 SINE B4 -80 212 71 7 664 249 193 72 0 chr13 10456132 10456215 -109828097 + (TCTA)n Simple_repeat Simple_repeat 3 91 0 7 664 1027 136 27 16 chr13 10456369 10456746 -109827566 + (TCTA)n Simple_repeat Simple_repeat 1 381 0 7 664 632 309 35 49 chr13 10457309 10457595 -109826717 + B4A SINE B4 5 286 -6 7 664 311 65 22 0 chr13 10458137 10458183 -109826129 + (CATA)n Simple_repeat Simple_repeat 3 49 0 7 664 1317 216 65 19 chr13 10458266 10458573 -109825739 + ORR1A4 LTR MaLR 1 321 -8 7 664 631 316 72 5 chr13 10459042 10459055 -109825257 - B3 SINE B2 -9 207 195 8 664 623 66 0 32 chr13 10459055 10459149 -109825163 + (CA)n Simple_repeat Simple_repeat 2 92 0 8 664 631 316 72 5 chr13 10459149 10459329 -109824983 - B3 SINE B2 -22 194 2 8 664 216 321 74 0 chr13 10459843 10459924 -109824388 + BC1_Mm scRNA scRNA 2 88 -64 8 664 22 0 0 0 chr13 10460632 10460654 -109823658 + AT_rich Low_complexity Low_complexity 1 22 0 8 664 279 165 52 0 chr13 10460685 10460800 -109823512 + (TCTCTG)n Simple_repeat Simple_repeat 4 124 0 8 664 479 160 11 33 chr13 10460791 10460972 -109823340 + (TCTG)n Simple_repeat Simple_repeat 2 178 0 8 664 273 98 0 0 chr13 10460985 10461026 -109823286 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 664 801 325 25 11 chr13 10461029 10461315 -109822997 - B4A SINE B4 -2 290 1 8 664 544 270 75 117 chr13 10461609 10461890 -109822422 - ORR1E LTR MaLR -5 354 86 8 664 535 299 40 6 chr13 10461982 10462157 -109822155 + B3A SINE B2 3 183 -15 8 664 540 279 19 52 chr13 10462338 10462484 -109821828 + RSINE1 SINE B4 2 142 -23 8 664 501 62 0 0 chr13 10462484 10462549 -109821763 + (TA)n Simple_repeat Simple_repeat 1 65 0 8 664 21 0 0 0 chr13 10462792 10462813 -109821499 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 405 0 0 0 chr13 10462936 10462981 -109821331 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 8 664 980 122 0 6 chr13 10462982 10463147 -109821165 + (GAA)n Simple_repeat Simple_repeat 1 164 0 8 664 762 68 25 0 chr13 10463148 10463266 -109821046 + (GAAA)n Simple_repeat Simple_repeat 4 124 0 8 664 369 316 57 32 chr13 10463458 10463615 -109820697 - LTR33A_ LTR ERVL -62 469 309 8 664 255 325 59 67 chr13 10463777 10463912 -109820400 - LTR33A_ LTR ERVL -366 154 21 8 664 1359 285 16 47 chr13 10464515 10464898 -109819414 - MTE2a LTR MaLR -8 371 1 8 664 225 0 0 0 chr13 10466031 10466056 -109818256 + (T)n Simple_repeat Simple_repeat 1 25 0 8 664 279 246 19 14 chr13 10466291 10466385 -109817927 - RMER1C Other Other -538 804 645 8 664 291 114 0 0 chr13 10466415 10466459 -109817853 + (TTC)n Simple_repeat Simple_repeat 1 44 0 8 664 666 175 51 7 chr13 10466461 10466599 -109817713 + RMER1C Other Other 1199 1342 0 8 664 775 345 163 15 chr13 10466660 10467392 -109816920 - L2 LINE L2 -346 3073 2234 8 664 182 136 0 22 chr13 10467490 10467535 -109816777 + (CAAAC)n Simple_repeat Simple_repeat 1 44 0 8 664 366 335 32 40 chr13 10468519 10468768 -109815544 - L1MEc LINE L1 -4053 2347 2101 8 664 482 307 134 19 chr13 10468882 10469150 -109815162 - Ricksha_c DNA MuDR -1203 845 547 8 664 523 195 134 47 chr13 10469299 10469471 -109814841 - Lx5 LINE L1 -5 7045 6859 8 664 2385 170 24 11 chr13 10469468 10469925 -109814387 + L1_Mur2 LINE L1 5379 5841 -36 8 664 23 33 0 0 chr13 10469988 10470018 -109814294 + AT_rich Low_complexity Low_complexity 1 30 0 8 664 438 298 181 48 chr13 10470036 10470516 -109813796 - L1MEc LINE L1 -4427 1973 1430 8 664 756 107 0 0 chr13 10470636 10470748 -109813564 + (TCTA)n Simple_repeat Simple_repeat 2 113 0 8 664 1028 258 161 16 chr13 10470875 10471241 -109813071 + MTD LTR MaLR 1 419 0 8 664 506 299 39 13 chr13 10472851 10473007 -109811305 - RSINE1 SINE B4 -4 161 2 8 664 21 0 0 0 chr13 10473051 10473072 -109811240 + AT_rich Low_complexity Low_complexity 1 21 0 8 664 798 309 23 66 chr13 10473097 10473154 -109811158 - B4A SINE B4 0 292 236 8 664 1185 108 10 31 chr13 10473154 10473346 -109810966 - B2_Mm1t SINE B2 -2 191 4 8 664 798 309 23 66 chr13 10473346 10473593 -109810719 - B4A SINE B4 -57 235 1 8 664 576 235 51 46 chr13 10473696 10473892 -109810420 - RMER30 DNA MER1_type -1 201 5 8 664 224 345 36 0 chr13 10474065 10474149 -109810163 - MIRb SINE MIR -117 151 65 8 664 807 304 17 17 chr13 10474433 10474724 -109809588 - B4A SINE B4 0 292 2 8 664 579 262 72 15 chr13 10476130 10476394 -109807918 + L1MA7 LINE L1 6013 6291 0 8 664 535 238 77 31 chr13 10476758 10476888 -109807424 + RSINE1 SINE B4 2 137 -28 8 664 629 246 14 36 chr13 10477498 10477637 -109806675 - B4 SINE B4 0 292 157 8 664 255 193 0 34 chr13 10477651 10477710 -109806602 - B4 SINE B4 -231 61 5 8 664 237 183 0 0 chr13 10478017 10478077 -109806235 + (CA)n Simple_repeat Simple_repeat 1 60 0 8 664 339 241 17 12 chr13 10478122 10478294 -109806018 + (CATATA)n Simple_repeat Simple_repeat 2 174 0 8 664 240 170 0 0 chr13 10478359 10478412 -109805900 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 664 492 18 0 0 chr13 10478679 10478736 -109805576 + (TC)n Simple_repeat Simple_repeat 2 58 0 8 664 282 29 0 0 chr13 10478736 10478770 -109805542 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 664 1864 201 102 29 chr13 10478770 10479191 -109805121 - MT2A LTR ERVL -81 452 1 8 664 636 148 0 0 chr13 10479197 10479305 -109805007 + (GAA)n Simple_repeat Simple_repeat 1 108 0 8 664 234 308 13 0 chr13 10479737 10479815 -109804497 - MLT1B LTR MaLR -11 379 301 8 664 248 59 0 0 chr13 10479815 10479849 -109804463 - L1_Mm LINE L1 -1130 4753 4720 8 664 1795 40 18 0 chr13 10479849 10480074 -109804238 + L1Md_F2 LINE L1 5358 5586 -297 8 664 7464 71 3 17 chr13 10480075 10481073 -109803239 + L1Md_F2 LINE L1 5588 6571 -11 8 664 318 333 22 89 chr13 10481073 10481208 -109803104 - MLT1B LTR MaLR -81 309 184 8 664 618 186 55 35 chr13 10481607 10481752 -109802560 + ORR1E LTR MaLR 1 148 -211 8 664 288 0 0 0 chr13 10481797 10481829 -109802483 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 664 343 286 33 115 chr13 10482479 10482661 -109801651 - MTEb LTR MaLR -7 372 206 8 664 204 294 20 0 chr13 10482768 10482819 -109801493 + polypyrimidine Low_complexity Low_complexity 1 52 0 8 664 444 323 0 23 chr13 10482934 10483064 -109801248 + RSINE1 SINE B4 4 130 -35 8 664 297 0 0 0 chr13 10483118 10483151 -109801161 + (TG)n Simple_repeat Simple_repeat 2 34 0 8 664 642 247 137 0 chr13 10483822 10483972 -109800340 + B3 SINE B2 1 172 -44 8 664 261 0 0 0 chr13 10483972 10484001 -109800311 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 664 642 247 137 0 chr13 10484001 10484032 -109800280 + B3 SINE B2 173 206 -10 8 664 180 97 0 0 chr13 10484072 10484103 -109800209 + (CAA)n Simple_repeat Simple_repeat 3 33 0 8 664 495 298 16 82 chr13 10484122 10484316 -109799996 + B3A SINE B2 2 182 -16 8 664 556 283 51 56 chr13 10484782 10484977 -109799335 - B3A SINE B2 0 198 5 8 664 189 0 0 0 chr13 10485236 10485257 -109799055 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 8 10 32473 86 16 2 chr13 10485260 10491485 -109792827 - L1Md_F2 LINE L1 -23 6559 240 8 665 34 42 0 0 chr13 10492356 10492404 -109791908 + AT_rich Low_complexity Low_complexity 1 48 0 8 665 620 305 19 57 chr13 10492425 10492634 -109791678 - B3 SINE B2 0 216 16 8 665 214 364 14 83 chr13 10492653 10492797 -109791515 + MIR SINE MIR 18 151 -111 8 665 468 169 12 35 chr13 10493952 10494038 -109790274 - B3A SINE B2 -57 141 58 8 665 2940 78 5 5 chr13 10494038 10494436 -109789876 + L1_Mus3 LINE L1 6229 6626 -12 8 665 7309 65 11 2 chr13 10494422 10495360 -109788952 + L1Md_F2 LINE L1 5623 6568 -14 8 665 1918 265 68 7 chr13 10495440 10495998 -109788314 - Lx6 LINE L1 -28 7432 6841 8 665 774 183 34 8 chr13 10495992 10496172 -109788140 - Lx6 LINE L1 -577 6883 6758 8 665 2029 219 10 46 chr13 10496178 10496829 -109787483 - Lx6 LINE L1 -1303 6157 5515 8 665 547 285 28 14 chr13 10497232 10497449 -109786863 - L1_Rod LINE L1 -11 5836 5617 8 665 257 356 22 0 chr13 10497485 10497575 -109786737 + MLT1E1A LTR MaLR 14 105 -575 8 665 243 0 0 0 chr13 10498159 10498186 -109786126 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 665 618 174 0 0 chr13 10498822 10498989 -109785323 + GA-rich Low_complexity Low_complexity 2 168 0 8 665 711 140 0 0 chr13 10498998 10499155 -109785157 + (GA)n Simple_repeat Simple_repeat 2 158 0 8 665 409 262 186 23 chr13 10499159 10499288 -109785024 - B3A SINE B2 -48 150 1 8 665 720 306 130 38 chr13 10500203 10500549 -109783763 + MTD LTR MaLR 7 384 -35 1 665 25 0 0 0 chr13 10500572 10500597 -109783715 + AT_rich Low_complexity Low_complexity 1 25 0 2 665 422 222 8 0 chr13 10501016 10501142 -109783170 + (TA)n Simple_repeat Simple_repeat 2 128 0 3 665 469 360 0 0 chr13 10502396 10502625 -109781687 + (CATA)n Simple_repeat Simple_repeat 1 229 0 4 665 694 245 7 20 chr13 10502799 10502945 -109781367 - B1_Mur1 SINE Alu 0 149 6 5 665 450 0 0 0 chr13 10503342 10503392 -109780920 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 665 283 279 12 12 chr13 10503446 10503526 -109780786 + GA-rich Low_complexity Low_complexity 2 81 0 7 665 476 316 175 13 chr13 10504282 10504516 -109779796 + B4A SINE B4 1 272 -20 8 665 1941 300 43 37 chr13 10504872 10505977 -109778335 - Ricksha DNA MuDR -72 3174 2063 9 665 194 159 14 42 chr13 10506062 10506120 -109778192 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 1 665 240 111 0 0 chr13 10506120 10506156 -109778156 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 665 194 159 14 42 chr13 10506156 10506169 -109778143 + (TATATG)n Simple_repeat Simple_repeat 6 18 0 1 665 25 0 0 0 chr13 10506232 10506257 -109778055 + AT_rich Low_complexity Low_complexity 1 25 0 1 665 642 294 0 6 chr13 10506270 10506451 -109777861 - B3A SINE B2 -18 180 1 1 665 551 318 19 19 chr13 10506457 10506611 -109777701 - B4A SINE B4 -104 188 35 1 665 608 252 50 54 chr13 10506667 10506773 -109777539 - Ricksha DNA MuDR -1370 1876 1771 9 665 820 216 0 0 chr13 10506773 10506921 -109777391 - B1_Mur4 SINE Alu -2 148 1 1 665 608 252 50 54 chr13 10506921 10507053 -109777259 - Ricksha DNA MuDR -1476 1770 1639 9 665 185 108 27 0 chr13 10507095 10507132 -109777180 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 665 625 323 37 10 chr13 10507557 10507851 -109776461 - Ricksha DNA MuDR -2409 837 536 9 665 1250 80 6 0 chr13 10507851 10508027 -109776285 + (TCTCC)n Simple_repeat Simple_repeat 2 178 0 1 665 825 86 22 54 chr13 10508027 10508212 -109776100 + C-rich Low_complexity Low_complexity 2 180 0 1 665 511 291 78 107 chr13 10508320 10508420 -109775892 + B4A SINE B4 8 91 -201 2 665 441 0 0 0 chr13 10508420 10508469 -109775843 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 665 281 26 26 0 chr13 10508470 10508508 -109775804 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 2 665 511 291 78 107 chr13 10508508 10508675 -109775637 + B4A SINE B4 92 269 -23 2 665 378 42 0 0 chr13 10508726 10508774 -109775538 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 665 379 337 45 23 chr13 10510294 10510470 -109773842 - MLT1A0 LTR MaLR -1 364 185 2 665 356 280 51 83 chr13 10510510 10510666 -109773646 - MLT1A0 LTR MaLR -239 151 1 2 665 908 277 87 25 chr13 10511072 10511428 -109772884 - MTEa LTR MaLR -1 378 1 2 665 473 261 8 70 chr13 10511809 10511937 -109772375 + B3A SINE B2 1 120 -78 2 665 512 161 11 0 chr13 10511938 10512025 -109772287 + ORR1C2 LTR MaLR 3 90 -284 2 665 574 100 44 0 chr13 10512027 10512117 -109772195 + ORR1C2 LTR MaLR 279 372 -12 2 665 2017 186 62 38 chr13 10512172 10512642 -109771670 - Lx5 LINE L1 -615 6435 5955 2 665 303 28 0 0 chr13 10512661 10512697 -109771615 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2 665 2801 143 104 7 chr13 10512717 10513275 -109771037 - Lx4B LINE L1 -63 6995 6384 3 665 2639 194 17 27 chr13 10513286 10513809 -109770503 + Lx5 LINE L1 6486 7003 -47 3 665 374 69 0 17 chr13 10513823 10513882 -109770430 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 3 665 604 229 47 34 chr13 10514991 10515140 -109769172 - MTE2b LTR MaLR -6 373 223 3 665 655 333 33 29 chr13 10515183 10515228 -109769084 - MTE2b LTR MaLR -131 248 207 3 665 3505 20 2 0 chr13 10515228 10515623 -109768689 + MTA_Mm LTR MaLR 1 396 0 3 665 8819 44 7 2 chr13 10515623 10516715 -109767597 + MTA_Mm-int LTR MaLR 1 1098 0 3 665 3505 20 2 0 chr13 10516715 10517110 -109767202 + MTA_Mm LTR MaLR 1 396 0 3 665 655 333 33 29 chr13 10517110 10517303 -109767009 - MTE2b LTR MaLR -173 206 9 3 665 605 307 30 12 chr13 10517426 10517591 -109766721 + B3A SINE B2 1 168 -30 3 665 5411 75 0 0 chr13 10517904 10518607 -109765705 - L1_Mus2 LINE L1 0 6566 5864 3 665 28395 112 34 15 chr13 10518612 10524745 -109759567 - L1_Mus1 LINE L1 0 6567 315 3 665 947 192 113 0 chr13 10524866 10525069 -109759243 - URR1A DNA MER1_type 0 226 1 3 665 384 232 12 35 chr13 10526506 10526591 -109757721 + B3A SINE B2 1 83 -115 3 665 435 19 0 0 chr13 10526817 10526869 -109757443 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 665 396 316 38 128 chr13 10527174 10527439 -109756873 - Lx8 LINE L1 -175 7298 7058 4 665 318 50 0 0 chr13 10527567 10527607 -109756705 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 665 247 284 30 0 chr13 10527631 10527698 -109756614 - B4 SINE B4 -10 282 214 4 665 496 246 196 0 chr13 10527733 10527871 -109756441 - B3 SINE B2 -6 210 46 4 665 423 371 19 72 chr13 10527863 10528072 -109756240 - B4 SINE B4 -50 242 45 4 665 1663 166 81 50 chr13 10528475 10528852 -109755460 + Lx4A LINE L1 6657 7045 -13 4 665 387 0 0 0 chr13 10528862 10528905 -109755407 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 665 348 43 0 0 chr13 10529677 10529723 -109754589 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 665 365 334 121 62 chr13 10531133 10531637 -109752675 + L1MEg LINE L1 577 1110 -4974 4 665 270 329 25 0 chr13 10531663 10531742 -109752570 + RSINE1 SINE B4 46 126 -39 4 665 40 83 0 0 chr13 10532018 10532114 -109752198 + AT_rich Low_complexity Low_complexity 1 96 0 5 665 192 77 0 0 chr13 10532280 10532306 -109752006 + (A)n Simple_repeat Simple_repeat 1 26 0 5 665 615 14 0 0 chr13 10532541 10532613 -109751699 + (CA)n Simple_repeat Simple_repeat 1 72 0 5 665 549 72 0 0 chr13 10532640 10532723 -109751589 + (TC)n Simple_repeat Simple_repeat 2 84 0 5 665 271 333 51 20 chr13 10532753 10532851 -109751461 - RSINE1 SINE B4 -19 146 46 5 665 244 335 79 35 chr13 10533004 10533042 -109751270 - Lx8 LINE L1 -52 7421 7388 5 665 524 74 42 0 chr13 10533042 10533137 -109751175 + (TCTA)n Simple_repeat Simple_repeat 2 100 0 5 665 244 335 79 35 chr13 10533137 10533352 -109750960 - Lx8 LINE L1 -86 7387 7158 5 665 1050 258 32 101 chr13 10533848 10534254 -109750058 - MTE2a LTR MaLR 0 379 2 5 665 425 193 26 35 chr13 10534396 10534509 -109749803 + ORR1E LTR MaLR 10 121 -238 5 665 658 248 32 6 chr13 10534616 10534774 -109749538 - MT2A LTR ERVL -369 164 3 5 665 498 320 62 12 chr13 10534956 10535358 -109748954 - L1M4 LINE L1 -764 5382 4961 6 665 559 263 35 70 chr13 10535377 10535555 -109748757 + B3A SINE B2 1 177 -21 6 665 369 0 0 0 chr13 10535555 10535596 -109748716 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 665 559 263 35 70 chr13 10535596 10535617 -109748695 + B3A SINE B2 178 193 -5 6 665 23 0 0 0 chr13 10536760 10536783 -109747529 + AT_rich Low_complexity Low_complexity 1 23 0 6 665 513 307 11 0 chr13 10538256 10538432 -109745880 + B3A SINE B2 4 181 -17 6 665 3651 228 42 80 chr13 10538935 10540209 -109744103 - RLTR42-int LTR ERVK -43 5479 4254 6 665 1473 206 41 41 chr13 10540601 10540965 -109743347 + Lx6 LINE L1 6616 6979 -481 6 665 883 218 66 42 chr13 10540982 10541269 -109743043 + Lx7 LINE L1 7403 7696 0 6 665 406 56 11 63 chr13 10541313 10541408 -109742904 + (TTTTTG)n Simple_repeat Simple_repeat 2 91 0 6 665 509 195 63 63 chr13 10541415 10541574 -109742738 - RLTR42-int LTR ERVK -1359 4163 4005 6 665 613 129 0 38 chr13 10541601 10541706 -109742606 - RLTR42-int LTR ERVK -4372 1150 1050 6 665 743 282 49 19 chr13 10542379 10542646 -109741666 - RLTR42-int LTR ERVK -4691 831 557 6 665 487 278 7 19 chr13 10542709 10542863 -109741449 - RLTR42-int LTR ERVK -5157 365 214 6 665 245 349 0 36 chr13 10542934 10543044 -109741268 - RMER12 LTR ERVK -467 855 750 6 665 4107 86 50 0 chr13 10543094 10543650 -109740662 + MT2B2 LTR ERVL 1 584 0 7 665 233 360 26 43 chr13 10544587 10544703 -109739609 - RSINE1 SINE B4 -8 157 44 7 665 315 343 63 88 chr13 10544753 10545117 -109739195 - ORR1E LTR MaLR -4 355 1 7 665 435 308 90 0 chr13 10545380 10545513 -109738799 + RSINE1 SINE B4 2 146 -19 7 665 180 0 0 0 chr13 10545542 10545562 -109738750 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 665 1168 68 0 0 chr13 10545806 10545953 -109738359 + B1_Mus2 SINE Alu 1 147 0 7 665 640 332 13 45 chr13 10545965 10546035 -109738277 + B4A SINE B4 1 68 -224 7 665 2863 66 58 10 chr13 10546035 10546433 -109737879 + L1Md_F2 LINE L1 6165 6581 -1 7 665 640 332 13 45 chr13 10546433 10546586 -109737726 + B4A SINE B4 69 217 -75 7 665 461 265 0 71 chr13 10546586 10546712 -109737600 + B4A SINE B4 172 288 -4 7 665 338 0 24 0 chr13 10547581 10547623 -109736689 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 7 665 2009 169 122 104 chr13 10548275 10548850 -109735462 - RMER4B LTR ERVK 0 585 1 8 665 350 230 37 65 chr13 10548859 10548966 -109735346 + ORR1D1 LTR MaLR 258 361 -13 8 665 633 291 32 79 chr13 10549103 10549293 -109735019 + B3A SINE B2 2 182 -16 8 665 23 0 0 0 chr13 10549354 10549377 -109734935 + AT_rich Low_complexity Low_complexity 1 23 0 8 665 1665 224 39 6 chr13 10549564 10549924 -109734388 - ORR1D1 LTR MaLR -2 372 1 8 665 649 286 43 21 chr13 10550014 10550200 -109734112 - B3A SINE B2 0 198 9 8 665 324 0 0 0 chr13 10551316 10551352 -109732960 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 665 463 311 6 11 chr13 10552040 10552219 -109732093 + B3A SINE B2 3 180 -18 8 665 624 277 36 26 chr13 10552874 10552962 -109731350 - B3A SINE B2 0 198 107 8 665 1000 67 0 0 chr13 10552962 10553096 -109731216 + L1_Mus1 LINE L1 6434 6567 0 8 665 624 277 36 26 chr13 10553096 10553200 -109731112 - B3A SINE B2 -92 106 4 8 665 23 54 0 0 chr13 10553211 10553248 -109731064 + AT_rich Low_complexity Low_complexity 1 37 0 9 665 365 143 0 28 chr13 10553706 10553778 -109730534 + CT-rich Low_complexity Low_complexity 2 71 0 9 665 709 323 38 15 chr13 10553817 10554084 -109730228 + MTE2a LTR MaLR 1 273 -106 9 665 440 158 39 69 chr13 10555095 10555197 -109729115 - B1_Mus2 SINE Alu 0 147 49 9 665 180 0 0 0 chr13 10555207 10555227 -109729085 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 9 665 3912 142 71 176 chr13 10555695 10556700 -109727612 + RMER21A LTR ERV1 49 947 0 9 665 308 251 0 0 chr13 10556709 10556778 -109727534 + RMER21A LTR ERV1 891 947 0 9 665 23 0 0 0 chr13 10557300 10557323 -109726989 + AT_rich Low_complexity Low_complexity 1 23 0 9 665 647 244 74 0 chr13 10557593 10557769 -109726543 - Lx6 LINE L1 -11 7449 7261 9 665 4220 58 2 0 chr13 10557913 10558445 -109725867 - L1Md_F2 LINE L1 0 6582 6050 9 665 1298 166 5 5 chr13 10558912 10559136 -109725176 - URR1B DNA MER1_type -1 224 1 1 665 2846 194 58 28 chr13 10559143 10559995 -109724317 - RMER6C LTR ERVK 0 720 1 1 665 453 265 0 67 chr13 10560015 10560120 -109724192 + B3A SINE B2 39 136 -62 1 665 420 20 0 0 chr13 10560130 10560179 -109724133 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 665 182 37 0 36 chr13 10560664 10560692 -109723620 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1 665 458 91 15 0 chr13 10560692 10560758 -109723554 - B1_Mm SINE Alu -4 143 77 1 665 207 0 0 0 chr13 10561535 10561558 -109722754 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 665 346 280 89 10 chr13 10561611 10561712 -109722600 - PB1D10 SINE Alu -2 115 7 1 665 484 306 9 9 chr13 10561634 10561743 -109722569 - ID_B1 SINE B4 -60 164 56 1 665 228 86 0 0 chr13 10561748 10561783 -109722529 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 665 541 328 108 10 chr13 10562002 10562205 -109722107 + B4A SINE B4 2 224 -68 1 665 282 344 11 21 chr13 10562214 10562309 -109722003 + B4A SINE B4 2 95 -197 1 665 450 0 0 0 chr13 10562329 10562379 -109721933 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 665 260 70 0 23 chr13 10563340 10563384 -109720928 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 665 354 275 131 86 chr13 10563394 10563569 -109720743 + B3A SINE B2 2 184 -14 1 665 6017 211 55 8 chr13 10563579 10565010 -109719302 - Lx9 LINE L1 -8 7636 6138 1 665 24 53 0 0 chr13 10565115 10565153 -109719159 + AT_rich Low_complexity Low_complexity 1 38 0 1 665 3319 209 47 4 chr13 10565614 10566322 -109717990 - Lx5 LINE L1 -8 7042 6305 1 665 24 0 0 0 chr13 10566824 10566848 -109717464 + AT_rich Low_complexity Low_complexity 1 24 0 1 665 1846 147 176 6 chr13 10567386 10567721 -109716591 + ORR1B1 LTR MaLR 3 394 0 1 665 28 61 0 0 chr13 10567889 10567938 -109716374 + AT_rich Low_complexity Low_complexity 1 49 0 1 665 336 48 0 0 chr13 10567951 10567993 -109716319 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 665 375 23 0 0 chr13 10567993 10568036 -109716276 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 665 1005 149 0 0 chr13 10569111 10569286 -109715026 + (TG)n Simple_repeat Simple_repeat 2 176 0 1 665 303 330 10 10 chr13 10569309 10569407 -109714905 - RSINE1 SINE B4 -57 108 11 1 665 1520 91 51 1 chr13 10569753 10570049 -109714263 - L1_Mus1 LINE L1 -3 6579 6230 1 665 524 226 7 57 chr13 10570128 10570269 -109714043 - B3 SINE B2 0 216 83 1 665 189 74 0 0 chr13 10570406 10570433 -109713879 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 665 849 184 7 0 chr13 10571063 10571204 -109713108 + B1_Mur3 SINE Alu 1 142 -7 1 665 438 69 0 0 chr13 10571225 10571283 -109713029 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 1 665 533 123 119 34 chr13 10572278 10572396 -109711916 + L1Md_F2 LINE L1 6450 6577 -5 1 665 278 291 162 9 chr13 10574189 10574300 -109710012 + MER57C2 LTR ERV1 307 434 0 1 665 182 318 105 12 chr13 10574619 10574705 -109709607 + MIRb SINE MIR 9 102 -166 1 665 661 159 34 22 chr13 10575072 10575340 -109708972 + (TCTCTG)n Simple_repeat Simple_repeat 1 271 0 1 665 280 132 23 46 chr13 10575371 10575458 -109708854 + (TCTCTG)n Simple_repeat Simple_repeat 6 90 0 1 665 215 351 0 0 chr13 10575458 10575515 -109708797 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 665 267 130 0 0 chr13 10575518 10575572 -109708740 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 665 1157 43 0 7 chr13 10576002 10576144 -109708168 - B1_Mm SINE Alu -6 141 1 1 665 3328 275 90 51 chr13 10576161 10577003 -109707309 - L1M2 LINE L1 -1142 5001 4143 1 665 378 0 0 0 chr13 10577003 10577045 -109707267 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 665 3328 275 90 51 chr13 10577045 10577229 -109707083 - L1M2 LINE L1 -2001 4142 3921 1 665 5975 106 52 14 chr13 10577229 10578152 -109706160 - RMER17B LTR ERVK 0 958 1 1 665 3328 275 90 51 chr13 10578152 10579107 -109705205 - L1M2 LINE L1 -2223 3920 2944 1 665 531 45 0 0 chr13 10579107 10579173 -109705139 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 1 665 3328 275 90 51 chr13 10579173 10579480 -109704832 - L1M2 LINE L1 -3200 2943 2621 1 665 333 0 0 0 chr13 10579532 10579569 -109704743 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 665 452 290 108 34 chr13 10580389 10580657 -109703655 + Lx8 LINE L1 7184 7471 -2 1 665 184 333 69 0 chr13 10580762 10580864 -109703448 - L2a LINE L2 -48 3378 3270 1 665 213 121 0 0 chr13 10582130 10582163 -109702149 + (TAAAA)n Simple_repeat Simple_repeat 1 33 0 1 665 410 268 0 0 chr13 10582263 10582345 -109701967 + ID SINE ID 3 84 -140 1 665 2672 175 28 12 chr13 10582360 10582857 -109701455 - RLTR16 LTR ERVK 0 505 1 1 665 405 232 106 89 chr13 10582857 10582970 -109701342 + ID_B1 SINE B4 109 223 -1 1 665 368 286 25 51 chr13 10583003 10583121 -109701191 + B4A SINE B4 5 119 -173 1 665 227 54 0 26 chr13 10583155 10583193 -109701119 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1 665 425 279 182 24 chr13 10583232 10583397 -109700915 + B3A SINE B2 3 193 -2 1 665 416 295 137 50 chr13 10583744 10583926 -109700386 - B3 SINE B2 0 198 1 1 665 593 299 7 14 chr13 10584514 10584660 -109699652 + B3A SINE B2 1 145 -53 1 665 234 235 71 133 chr13 10584981 10585094 -109699218 + B1_Mur4 SINE Alu 44 149 -1 1 665 390 85 0 0 chr13 10585278 10585337 -109698975 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 665 229 273 20 29 chr13 10586089 10586191 -109698121 + (TATATG)n Simple_repeat Simple_repeat 5 105 0 1 665 23 0 0 0 chr13 10586386 10586409 -109697903 + AT_rich Low_complexity Low_complexity 1 23 0 1 665 1681 227 31 22 chr13 10586773 10587188 -109697124 - MTD LTR MaLR 0 419 1 1 665 6695 143 20 26 chr13 10587629 10589754 -109694558 + Lx LINE L1 4550 6654 0 1 665 212 72 53 18 chr13 10589894 10589951 -109694361 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 1 665 322 281 73 27 chr13 10590617 10590767 -109693545 - RSINE1 SINE B4 -7 158 2 1 665 364 276 98 0 chr13 10591278 10591401 -109692911 + MER89 LTR ERV1 172 306 -253 1 665 242 258 60 15 chr13 10591374 10591441 -109692871 + LTR48 LTR ERV1 78 147 -640 1 665 246 306 59 59 chr13 10591452 10591605 -109692707 + MER89 LTR ERV1 313 465 -94 1 665 411 317 35 28 chr13 10591590 10591733 -109692579 + MTD LTR MaLR 38 181 -238 1 665 297 0 0 0 chr13 10591756 10591789 -109692523 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 665 219 25 49 24 chr13 10591841 10591882 -109692430 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 665 712 257 19 16 chr13 10591943 10592134 -109692178 + MTD LTR MaLR 179 386 -33 1 665 23 68 0 0 chr13 10592721 10592765 -109691547 + AT_rich Low_complexity Low_complexity 1 44 0 1 665 417 281 23 15 chr13 10592842 10592972 -109691340 - ID_B1 SINE B4 0 224 94 1 665 234 0 0 0 chr13 10593016 10593042 -109691270 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 665 273 145 0 0 chr13 10593044 10593106 -109691206 + (GA)n Simple_repeat Simple_repeat 2 63 0 1 665 455 256 25 8 chr13 10593140 10593262 -109691050 - RSINE1 SINE B4 -40 125 2 1 665 398 256 178 44 chr13 10593471 10593606 -109690706 - RSINE1 SINE B4 -10 155 3 1 665 183 42 0 0 chr13 10593648 10593672 -109690640 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 665 604 289 10 16 chr13 10594032 10594225 -109690087 - B3A SINE B2 -5 193 2 1 665 246 241 185 54 chr13 10595023 10595115 -109689197 - B3 SINE B2 -112 104 1 1 665 388 312 118 14 chr13 10595738 10595959 -109688353 + L1MB7 LINE L1 5925 6168 -16 1 665 209 57 0 28 chr13 10596114 10596150 -109688162 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 665 320 241 50 12 chr13 10596189 10596269 -109688043 - MTEa LTR MaLR -42 337 255 1 665 268 372 28 103 chr13 10596284 10596536 -109687776 - MTEa LTR MaLR -120 239 7 1 665 24 0 0 0 chr13 10596654 10596678 -109687634 + AT_rich Low_complexity Low_complexity 1 24 0 1 665 258 32 0 0 chr13 10597172 10597203 -109687109 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 665 393 22 0 0 chr13 10597203 10597248 -109687064 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 665 562 273 234 15 chr13 10598287 10598617 -109685695 + MTD LTR MaLR 18 419 0 1 665 270 287 10 96 chr13 10600303 10600407 -109683905 + L2c LINE L2 3285 3379 -8 1 665 259 95 0 0 chr13 10602030 10602072 -109682240 + L1Md_F LINE L1 187 228 -6291 1 665 34074 53 14 16 chr13 10602073 10607408 -109676904 + L1Md_A LINE L1 263 5586 -297 1 665 8503 27 1 1 chr13 10607408 10608403 -109675909 + L1Md_A LINE L1 5587 6581 -1 1 665 4198 50 8 9 chr13 10608646 10609177 -109675135 + L1Md_F3 LINE L1 6052 6581 -3 1 665 227 196 0 0 chr13 10609266 10609317 -109674995 + T-rich Low_complexity Low_complexity 1 51 0 1 665 1294 83 0 0 chr13 10609327 10609520 -109674792 - L1Md_A LINE L1 -2651 3232 3040 1 665 4213 65 0 0 chr13 10609517 10610083 -109674229 - L1_Mm LINE L1 -745 5138 4573 1 665 5361 103 8 1 chr13 10610083 10611595 -109672717 - L1Md_A LINE L1 -3936 1947 469 1 665 28 71 0 0 chr13 10612005 10612061 -109672251 + AT_rich Low_complexity Low_complexity 1 56 0 1 665 1025 287 41 38 chr13 10612573 10612863 -109671449 + B4 SINE B4 2 292 0 1 665 614 272 93 28 chr13 10614370 10614657 -109669655 + MTEb LTR MaLR 94 369 -10 1 665 984 90 28 0 chr13 10614684 10614828 -109669484 + B1_Mus1 SINE Alu 1 148 0 1 665 360 183 0 0 chr13 10614828 10614921 -109669391 + A-rich Low_complexity Low_complexity 1 93 0 1 665 256 0 24 49 chr13 10615252 10615293 -109669019 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 1 665 253 284 39 10 chr13 10615465 10615568 -109668744 + LTR48 LTR ERV1 678 783 -4 1 665 496 280 67 21 chr13 10616223 10616416 -109667896 + B3 SINE B2 2 203 -13 1 83 1668 156 25 200 chr13 10616526 10617047 -109667265 - RLTR23 LTR ERV1 0 430 1 1 666 27 49 0 0 chr13 10617047 10617088 -109667224 + AT_rich Low_complexity Low_complexity 1 41 0 1 666 203 119 23 23 chr13 10617343 10617386 -109666926 + (CAAA)n Simple_repeat Simple_repeat 4 46 0 1 666 254 327 59 78 chr13 10617672 10617891 -109666421 + RMER15 LTR ERVL 352 566 -9 1 666 212 221 35 45 chr13 10618516 10618715 -109665597 + (TG)n Simple_repeat Simple_repeat 1 197 0 2 666 22 80 0 0 chr13 10619230 10619280 -109665032 + AT_rich Low_complexity Low_complexity 1 50 0 2 666 381 309 43 0 chr13 10619362 10619456 -109664856 + B4A SINE B4 75 172 -120 2 666 371 210 10 0 chr13 10619505 10619605 -109664707 + (TA)n Simple_repeat Simple_repeat 1 101 0 2 666 747 216 54 27 chr13 10620620 10620647 -109663665 - B2_Mm1t SINE B2 -1 192 167 2 666 181 0 69 0 chr13 10620647 10620676 -109663636 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 666 894 143 52 1 chr13 10620676 10620834 -109663478 - B2_Mm2 SINE B2 -27 166 2 2 666 660 263 36 31 chr13 10622022 10622218 -109662094 - MTEb LTR MaLR -12 367 171 2 666 291 113 0 0 chr13 10622619 10622672 -109661640 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 666 280 303 13 38 chr13 10622701 10622780 -109661532 - B4A SINE B4 -208 84 8 2 666 319 322 32 92 chr13 10625387 10625601 -109658711 + B4 SINE B4 1 208 -16 2 666 292 299 17 43 chr13 10625734 10625877 -109658435 + GA-rich Low_complexity Low_complexity 1 139 0 2 666 551 273 66 0 chr13 10626009 10626130 -109658182 + B3A SINE B2 10 138 -60 2 666 21 0 0 0 chr13 10626168 10626189 -109658123 + AT_rich Low_complexity Low_complexity 1 21 0 2 666 522 252 30 89 chr13 10626204 10626430 -109657882 - MTD LTR MaLR -14 405 196 2 666 201 74 0 0 chr13 10626454 10626481 -109657831 + (CCTCG)n Simple_repeat Simple_repeat 3 29 0 2 666 620 223 72 36 chr13 10626489 10626684 -109657628 - Lx6 LINE L1 -26 7434 7233 2 666 242 263 125 48 chr13 10626713 10626817 -109657495 - MTD LTR MaLR -292 129 18 2 666 293 62 21 0 chr13 10627036 10627084 -109657228 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 666 342 308 122 78 chr13 10628316 10628612 -109655700 - Lx8 LINE L1 -30 7443 7135 2 666 1015 279 118 9 chr13 10628622 10628951 -109655361 - RMER15 LTR ERVL -2 573 209 2 666 531 0 0 0 chr13 10628961 10629020 -109655292 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 666 566 227 8 25 chr13 10629033 10629155 -109655157 - RSINE1 SINE B4 -42 123 4 2 666 576 77 0 0 chr13 10629637 10629715 -109654597 + (GA)n Simple_repeat Simple_repeat 2 79 0 2 666 369 129 0 0 chr13 10630450 10630520 -109653792 + (TC)n Simple_repeat Simple_repeat 1 70 0 2 666 345 82 0 0 chr13 10630521 10630570 -109653742 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 666 351 0 0 0 chr13 10630570 10630608 -109653704 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 666 225 0 0 0 chr13 10630608 10630632 -109653680 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 666 256 265 0 98 chr13 10630677 10630769 -109653543 - B3A SINE B2 -114 84 2 2 666 220 383 0 0 chr13 10630899 10630959 -109653353 + B4A SINE B4 87 146 -146 2 666 308 275 153 32 chr13 10630907 10631031 -109653281 + B1F1 SINE Alu 10 148 -1 2 666 450 0 0 0 chr13 10631504 10631554 -109652758 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 666 993 158 0 0 chr13 10631636 10631813 -109652499 + CT-rich Low_complexity Low_complexity 2 178 0 2 666 5495 114 44 5 chr13 10631813 10632683 -109651629 - Lx3B LINE L1 -9 6964 6061 2 666 298 286 13 13 chr13 10632986 10633064 -109651248 + B1F1 SINE Alu 3 80 -69 2 666 3438 25 2 0 chr13 10633193 10633588 -109650724 - MTA_Mm LTR MaLR 0 396 1 2 666 378 314 109 0 chr13 10633669 10633825 -109650487 + RMER15 LTR ERVL 403 575 0 2 666 869 98 15 0 chr13 10634026 10634159 -109650153 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 2 666 510 253 66 1 chr13 10634731 10634869 -109649443 - ID_B1 SINE B4 0 224 83 2 666 331 333 145 50 chr13 10635568 10635789 -109648523 + MER119 DNA MER1_type 75 316 -267 2 666 24 32 0 0 chr13 10636061 10636092 -109648220 + AT_rich Low_complexity Low_complexity 1 31 0 2 666 367 321 149 20 chr13 10636109 10636357 -109647955 - RMER15 LTR ERVL -15 560 281 2 666 214 205 0 0 chr13 10637376 10637415 -109646897 + A-rich Low_complexity Low_complexity 1 39 0 2 666 351 252 29 39 chr13 10637883 10637986 -109646326 + RSINE1 SINE B4 16 117 -48 2 666 324 102 0 0 chr13 10637992 10638041 -109646271 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 666 290 366 40 6 chr13 10638309 10638485 -109645827 - MLT1G3 LTR MaLR 0 595 414 2 666 56 29 0 0 chr13 10638739 10638809 -109645503 + AT_rich Low_complexity Low_complexity 1 70 0 2 666 27 0 0 0 chr13 10639178 10639205 -109645107 + AT_rich Low_complexity Low_complexity 1 27 0 2 666 454 293 9 0 chr13 10639649 10639765 -109644547 - RSINE1 SINE B4 -48 117 1 2 666 474 288 35 7 chr13 10640225 10640371 -109643941 + B3A SINE B2 5 162 -54 2 666 201 136 81 69 chr13 10640895 10640982 -109643330 + (TTTAA)n Simple_repeat Simple_repeat 1 88 0 2 666 498 304 14 14 chr13 10641629 10641769 -109642543 + B4 SINE B4 153 292 0 2 666 974 272 84 4 chr13 10641854 10642116 -109642196 - ORR1D2 LTR MaLR -2 368 86 2 666 1189 235 74 67 chr13 10642116 10642638 -109641674 + RMER2 LTR ERV1 1 565 -2 2 666 494 187 11 0 chr13 10642638 10642718 -109641594 - ORR1D2 LTR MaLR -288 86 6 2 666 2263 50 0 0 chr13 10642736 10643014 -109641298 + L1_Mus2 LINE L1 5614 5891 -675 2 666 832 327 7 7 chr13 10643330 10643604 -109640708 - B4A SINE B4 -14 278 5 2 666 422 356 96 6 chr13 10644072 10644425 -109639887 - L1M5 LINE L1 -456 5784 5400 2 666 350 342 39 6 chr13 10644659 10644815 -109639497 - HAL1-3A_ME LINE L1 -724 2134 1974 2 666 259 364 0 48 chr13 10644822 10644926 -109639386 - B4A SINE B4 0 292 194 2 666 234 326 78 0 chr13 10645315 10645456 -109638856 + MER58B DNA MER1_type 158 309 -32 2 666 647 301 30 34 chr13 10645502 10645739 -109638573 + Lx8 LINE L1 7161 7396 -77 2 666 3014 80 12 15 chr13 10646235 10646643 -109637669 + MTB_Mm LTR MaLR 1 407 0 2 666 1075 316 133 12 chr13 10646681 10647244 -109637068 + Lx8 LINE L1 6840 7470 -3 2 666 1275 258 20 54 chr13 10647830 10648220 -109636092 + MTE2b LTR MaLR 1 377 -2 2 666 847 296 18 55 chr13 10648382 10648654 -109635658 - MTEb LTR MaLR -47 332 71 2 666 612 206 0 0 chr13 10650035 10650181 -109634131 + (TG)n Simple_repeat Simple_repeat 1 146 0 2 666 243 204 41 0 chr13 10650181 10650230 -109634082 - RSINE1 SINE B4 0 165 115 2 666 261 282 0 0 chr13 10650643 10650767 -109633545 + (TG)n Simple_repeat Simple_repeat 1 124 0 2 666 279 161 0 0 chr13 10650815 10650871 -109633441 + (TTTA)n Simple_repeat Simple_repeat 1 56 0 2 666 311 298 57 96 chr13 10650873 10651108 -109633204 - B4 SINE B4 -71 221 1 2 666 930 19 0 0 chr13 10651333 10651441 -109632871 + (GA)n Simple_repeat Simple_repeat 1 108 0 2 666 222 37 0 0 chr13 10651463 10651490 -109632822 + (A)n Simple_repeat Simple_repeat 1 27 0 2 666 651 60 0 0 chr13 10651999 10652083 -109632229 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 2 666 3281 113 17 2 chr13 10652083 10652563 -109631749 - Lx2 LINE L1 -3 6994 6508 2 666 369 0 0 0 chr13 10653614 10653655 -109630657 + (TC)n Simple_repeat Simple_repeat 1 41 0 2 666 402 69 0 0 chr13 10653655 10653712 -109630600 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 666 291 275 25 20 chr13 10653847 10653980 -109630332 - MLT1A1 LTR MaLR -12 396 232 2 666 246 308 0 0 chr13 10654020 10654085 -109630227 + GA-rich Low_complexity Low_complexity 3 67 0 2 666 301 310 66 123 chr13 10654896 10655124 -109629188 - MLT1F2 LTR MaLR -12 642 319 2 666 844 331 203 37 chr13 10655478 10656667 -109627645 - MLT1F2-int LTR MaLR -102 1387 2 2 666 381 348 118 60 chr13 10656668 10657066 -109627246 - MLT1F2 LTR MaLR 0 560 140 2 666 928 312 44 15 chr13 10657139 10657480 -109626832 - Lx8 LINE L1 -618 6855 6505 2 666 2501 160 55 5 chr13 10657496 10657524 -109626788 + RMER4A LTR ERVK 6 33 -433 2 666 261 0 0 0 chr13 10657524 10657553 -109626759 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 666 2501 160 55 5 chr13 10657553 10657963 -109626349 + RMER4A LTR ERVK 34 465 -1 2 666 941 290 72 22 chr13 10657980 10658236 -109626076 - Lx8 LINE L1 -984 6489 6183 2 666 762 11 0 0 chr13 10658236 10658323 -109625989 + (TC)n Simple_repeat Simple_repeat 1 87 0 2 666 941 311 108 35 chr13 10658323 10658694 -109625618 - Lx8 LINE L1 -1291 6182 5783 2 666 729 206 36 18 chr13 10658824 10658992 -109625320 - Lx7 LINE L1 -1909 5787 5617 2 666 876 328 11 0 chr13 10659174 10659445 -109624867 + Lx8 LINE L1 6876 7149 -324 2 666 3556 164 240 25 chr13 10659507 10660353 -109623959 + RLTR25B LTR ERVK 1 1028 0 2 666 2424 127 39 65 chr13 10660697 10661098 -109623214 + RLTR11B LTR ERVK 1 378 -75 2 666 405 0 0 0 chr13 10661098 10661143 -109623169 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2 666 2424 127 39 65 chr13 10661143 10661203 -109623109 + RLTR11B LTR ERVK 379 449 -4 2 666 810 263 131 19 chr13 10661241 10661501 -109622811 - Lx2B LINE L1 0 7000 6712 2 666 10277 154 31 52 chr13 10661504 10662317 -109621995 - Lx4B LINE L1 -1078 5980 5106 2 666 254 29 29 0 chr13 10662317 10662352 -109621960 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2 666 10277 151 32 58 chr13 10662352 10662425 -109621887 - Lx4B LINE L1 -772 5105 5096 2 666 3921 70 23 0 chr13 10662425 10662937 -109621375 - L1_Mus1 LINE L1 -1 6566 6043 2 666 420 139 0 0 chr13 10662936 10663008 -109621304 - L1_Mus2 LINE L1 -9 6557 6486 2 666 10277 151 32 58 chr13 10663008 10664273 -109620039 - Lx4B LINE L1 -782 5095 3877 2 666 22 0 0 0 chr13 10664368 10664390 -109619922 + AT_rich Low_complexity Low_complexity 1 22 0 2 666 717 296 73 25 chr13 10664390 10664594 -109619718 + ID_B1 SINE B4 4 217 -7 2 666 31493 66 1 3 chr13 10665025 10671274 -109613038 - L1Md_F2 LINE L1 0 6585 253 2 666 2753 194 38 122 chr13 10671365 10672022 -109612290 + RMER19C LTR ERVK 8 609 -2 2 666 189 107 0 0 chr13 10672023 10672051 -109612261 + (GA)n Simple_repeat Simple_repeat 1 28 0 2 666 433 342 62 124 chr13 10672089 10672379 -109611933 - B4A SINE B4 -8 284 13 2 666 255 200 217 0 chr13 10672443 10672503 -109611809 - ID4_ SINE ID -10 73 1 2 666 32 43 0 0 chr13 10673198 10673244 -109611068 + AT_rich Low_complexity Low_complexity 1 46 0 2 666 496 391 0 18 chr13 10673244 10673408 -109610904 - RSINE1 SINE B4 -2 163 3 2 666 354 288 63 16 chr13 10673582 10673709 -109610603 - B3 SINE B2 -5 211 79 3 666 182 368 63 0 chr13 10674598 10674693 -109609619 - MIRc SINE MIR -45 223 123 3 666 216 0 0 0 chr13 10674821 10674845 -109609467 + (A)n Simple_repeat Simple_repeat 1 24 0 3 666 775 213 132 5 chr13 10674917 10675106 -109609206 + B3 SINE B2 4 216 0 3 666 26 0 0 0 chr13 10675106 10675132 -109609180 + AT_rich Low_complexity Low_complexity 1 26 0 3 666 703 294 55 10 chr13 10675567 10675766 -109608546 - ID_B1 SINE B4 -2 222 15 3 666 598 344 124 22 chr13 10676022 10676426 -109607886 - MER90a LTR ERV1 -93 521 77 3 666 1152 139 0 0 chr13 10678111 10678283 -109606029 + B2_Mm2 SINE B2 2 173 -22 3 666 459 46 316 8 chr13 10678301 10678404 -109605908 + B2_Mm2 SINE B2 48 185 -10 3 666 369 275 107 58 chr13 10678436 10678641 -109605671 - Lx8 LINE L1 -32 7441 7227 3 666 581 307 7 0 chr13 10679076 10679216 -109605096 + RSINE1 SINE B4 3 143 -22 3 666 6236 64 88 2 chr13 10680023 10680879 -109603433 + RLTR13B3 LTR ERVK 1 929 0 3 666 243 0 0 0 chr13 10681094 10681121 -109603191 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 666 571 281 51 25 chr13 10681326 10681483 -109602829 + B3A SINE B2 1 161 -37 3 666 351 0 0 0 chr13 10681487 10681526 -109602786 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 666 3165 53 2 8 chr13 10681718 10682116 -109602196 - MTA_Mm LTR MaLR 0 396 1 3 666 2835 18 0 38 chr13 10682356 10682696 -109601616 - IAPLTR2b LTR ERVK 0 327 1 3 666 21 0 0 0 chr13 10683379 10683400 -109600912 + AT_rich Low_complexity Low_complexity 1 21 0 3 666 702 165 0 0 chr13 10683742 10683863 -109600449 - B2_Mm2 SINE B2 -66 129 9 3 666 810 282 6 28 chr13 10683916 10684098 -109600214 - B3A SINE B2 -20 178 1 3 666 293 283 74 68 chr13 10684165 10684363 -109599949 + MLT1A1 LTR MaLR 1 194 -165 3 666 313 206 162 0 chr13 10684455 10684523 -109599789 + B3 SINE B2 1 79 -137 3 666 880 185 23 23 chr13 10684524 10684705 -109599607 + RMER17C LTR ERVK 1 182 -228 3 666 687 25 0 0 chr13 10684705 10684786 -109599526 + (TC)n Simple_repeat Simple_repeat 2 82 0 3 666 880 185 23 23 chr13 10684786 10684820 -109599492 + RMER17C LTR ERVK 183 216 -194 3 666 3014 121 48 38 chr13 10684842 10684988 -109599324 - RMER16 LTR ERVK 0 533 391 3 666 4216 86 24 29 chr13 10684988 10685578 -109598734 - LTRIS_Mus LTR ERV1 0 587 1 3 666 3014 121 48 38 chr13 10685578 10685956 -109598356 - RMER16 LTR ERVK -143 390 4 3 666 315 0 0 0 chr13 10685956 10685991 -109598321 + (CTATA)n Simple_repeat Simple_repeat 3 37 0 3 666 670 185 8 23 chr13 10685991 10686124 -109598188 + RMER17C LTR ERVK 280 410 0 3 666 1471 201 241 59 chr13 10686126 10686700 -109597612 + RMER17C-int LTR ERVK 2 679 -2559 3 666 349 38 0 0 chr13 10687535 10687588 -109596724 - L1_Mus4 LINE L1 -5 6631 6579 3 666 216 0 0 0 chr13 10687595 10687619 -109596693 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 3 666 2137 188 119 23 chr13 10687684 10688256 -109596056 + RMER17C-int LTR ERVK 1397 2023 -1215 3 666 822 148 113 11 chr13 10688274 10688459 -109595853 + RMER17C-int LTR ERVK 2156 2359 -879 3 666 1376 80 243 29 chr13 10688447 10688719 -109595593 + RMER17C-int LTR ERVK 2532 2861 -377 3 666 732 195 0 0 chr13 10688730 10688879 -109595433 + (CA)n Simple_repeat Simple_repeat 2 150 0 3 666 405 0 0 0 chr13 10688881 10688926 -109595386 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 666 1945 157 24 3 chr13 10688926 10689258 -109595054 + RMER17C-int LTR ERVK 2900 3238 0 3 666 1799 173 7 48 chr13 10689258 10689677 -109594635 + RMER17C LTR ERVK 1 402 -8 3 666 284 102 0 0 chr13 10689723 10689772 -109594540 + B3 SINE B2 167 215 -1 3 666 513 76 0 0 chr13 10689966 10690045 -109594267 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 666 427 390 8 45 chr13 10690522 10690788 -109593524 - L2b LINE L2 -207 3168 2913 3 666 21 36 0 0 chr13 10693011 10693039 -109591273 + AT_rich Low_complexity Low_complexity 1 28 0 3 666 1301 255 27 11 chr13 10693304 10693677 -109590635 - MTEa LTR MaLR 0 379 1 3 666 238 180 78 11 chr13 10694430 10694520 -109589792 + (TA)n Simple_repeat Simple_repeat 1 96 0 3 666 234 160 0 0 chr13 10694521 10694571 -109589741 + (ATG)n Simple_repeat Simple_repeat 2 51 0 3 666 385 284 84 5 chr13 10694678 10694881 -109589431 - L1MA4 LINE L1 -372 5928 5727 3 666 225 94 0 0 chr13 10695029 10695061 -109589251 + (TCC)n Simple_repeat Simple_repeat 3 34 0 3 666 196 130 0 42 chr13 10695067 10695115 -109589197 + (CAT)n Simple_repeat Simple_repeat 3 48 0 3 666 632 240 13 20 chr13 10695987 10696136 -109588176 - B1_Mur3 SINE Alu -1 148 1 3 666 327 255 9 109 chr13 10696217 10696327 -109587985 - L1ME2 LINE L1 -15 6149 6051 3 666 573 372 60 39 chr13 10696328 10696714 -109587598 + MLT1F LTR MaLR 14 407 -141 3 666 833 281 74 7 chr13 10696793 10697090 -109587222 + Lx8 LINE L1 7136 7452 -21 3 666 225 119 0 0 chr13 10697857 10697899 -109586413 + (CTTG)n Simple_repeat Simple_repeat 2 43 0 3 666 369 43 0 0 chr13 10697924 10697971 -109586341 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 666 281 220 0 74 chr13 10697976 10698084 -109586228 + Lx7 LINE L1 7579 7678 -18 3 666 945 134 17 0 chr13 10698186 10698358 -109585954 + (TCCA)n Simple_repeat Simple_repeat 3 177 0 3 666 1227 47 6 17 chr13 10698365 10698538 -109585774 + (TCTA)n Simple_repeat Simple_repeat 1 171 0 3 666 37738 30 2 6 chr13 10698551 10704726 -109579586 - L1Md_A LINE L1 -1 6581 440 3 666 762 97 26 0 chr13 10704810 10704923 -109579389 - B1_Mus2 SINE Alu 0 147 32 3 666 265 212 71 0 chr13 10705038 10705123 -109579189 - L1M2 LINE L1 -1905 4937 4847 3 666 2790 103 2 27 chr13 10705289 10705699 -109578613 + MTB LTR MaLR 1 400 0 3 666 277 314 88 25 chr13 10705746 10706178 -109578134 - L1M2 LINE L1 -3484 3361 2903 3 666 239 237 48 67 chr13 10706505 10706609 -109577703 - L1M2 LINE L1 -4291 2558 2457 3 666 415 352 93 38 chr13 10706643 10707039 -109577273 - L1MEg LINE L1 -4857 1227 810 3 666 428 333 95 36 chr13 10709542 10709816 -109574496 + B4 SINE B4 1 290 -2 3 666 250 306 139 39 chr13 10709917 10710046 -109574266 - RLTR12B LTR ERVK -271 257 116 3 666 231 234 0 0 chr13 10711532 10711579 -109572733 - RLTR12B LTR ERVK -470 58 12 3 666 346 357 60 0 chr13 10711579 10711764 -109572548 + Lx8 LINE L1 6831 7026 -447 3 666 512 346 87 35 chr13 10713265 10713609 -109570703 - ORR1D2 LTR MaLR -3 367 6 3 666 293 301 23 39 chr13 10714403 10714453 -109569859 - BC1_Mm scRNA scRNA -26 126 18 3 666 305 279 0 56 chr13 10714453 10714525 -109569787 - tRNA-Ala-GCA tRNA tRNA -7 68 1 3 666 570 319 90 45 chr13 10714715 10714915 -109569397 + ID_B1 SINE B4 16 224 0 3 666 1707 79 16 8 chr13 10716899 10717141 -109567171 + L1Md_F2 LINE L1 6337 6580 -2 3 666 499 314 34 40 chr13 10717202 10717379 -109566933 + B3A SINE B2 8 182 -16 3 666 459 0 0 0 chr13 10717379 10717430 -109566882 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 666 304 315 5 110 chr13 10717430 10717452 -109566860 + B2_Mm2 SINE B2 168 186 -9 3 666 331 324 90 16 chr13 10717989 10718177 -109566135 + ORR1E LTR MaLR 153 354 -5 3 666 399 352 94 39 chr13 10718188 10718711 -109565601 + L2a LINE L2 2695 3258 -168 3 666 320 264 112 21 chr13 10718964 10719073 -109565239 + L1MB4 LINE L1 5301 5419 -759 3 666 243 0 0 0 chr13 10719073 10719100 -109565212 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 666 320 264 112 21 chr13 10719100 10719133 -109565179 + L1MB4 LINE L1 5420 5455 -723 3 666 365 299 34 88 chr13 10719165 10719517 -109564795 + L1MB4 LINE L1 5569 5901 -279 3 666 823 291 31 81 chr13 10719545 10719904 -109564408 + MTE2a LTR MaLR 39 379 0 3 666 3176 61 2 0 chr13 10720729 10721124 -109563188 - MTA_Mm LTR MaLR 0 396 1 3 666 971 68 0 50 chr13 10722657 10722797 -109561515 + B1_Mm SINE Alu 15 147 0 3 666 23 0 0 0 chr13 10723314 10723337 -109560975 + AT_rich Low_complexity Low_complexity 1 23 0 3 666 25 51 0 0 chr13 10723443 10723482 -109560830 + AT_rich Low_complexity Low_complexity 1 39 0 3 666 1203 68 0 0 chr13 10723491 10723639 -109560673 + B1_Mus1 SINE Alu 1 148 0 3 666 189 107 0 0 chr13 10723664 10723692 -109560620 + (A)n Simple_repeat Simple_repeat 1 28 0 3 666 243 0 0 0 chr13 10723844 10723871 -109560441 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 666 316 328 127 20 chr13 10723871 10724123 -109560189 - L1MC LINE L1 -2098 5784 5506 3 666 439 224 55 18 chr13 10724413 10724522 -109559790 - B4 SINE B4 -175 117 5 3 666 3163 30 2 44 chr13 10725781 10726006 -109558306 - MTA_Mm LTR MaLR 0 396 189 3 666 3941 39 6 8 chr13 10726006 10726495 -109557817 - L1Md_F2 LINE L1 0 6582 6095 3 666 3163 30 2 44 chr13 10726495 10726682 -109557630 - MTA_Mm LTR MaLR -208 188 1 3 666 9224 33 2 1 chr13 10726682 10727779 -109556533 - MTA_Mm-int LTR MaLR 0 1098 1 3 666 3419 30 2 0 chr13 10727779 10728173 -109556139 - MTA_Mm LTR MaLR 0 396 2 3 666 489 265 54 89 chr13 10728353 10728556 -109555756 - B3A SINE B2 0 198 3 3 666 2900 48 3 0 chr13 10728590 10728947 -109555365 + L1Md_A LINE L1 6222 6579 -3 3 666 180 0 0 0 chr13 10728953 10728973 -109555339 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 3 666 309 266 19 10 chr13 10730092 10730198 -109554114 - L1MD LINE L1 -1212 4934 4829 3 666 1968 155 12 0 chr13 10730366 10730689 -109553623 - ORR1A2 LTR MaLR 0 327 1 3 666 859 78 16 0 chr13 10730690 10730819 -109553493 + (TG)n Simple_repeat Simple_repeat 2 132 0 3 666 605 348 63 13 chr13 10730845 10731084 -109553228 - B4A SINE B4 -6 286 36 3 666 726 23 0 0 chr13 10731144 10731232 -109553080 + (CA)n Simple_repeat Simple_repeat 2 89 0 3 666 472 210 4 120 chr13 10731837 10732030 -109552282 + ORR1D1 LTR MaLR 1 129 -245 3 666 227 238 0 45 chr13 10732044 10732110 -109552202 + ORR1B2 LTR MaLR 55 117 -250 3 666 272 243 33 26 chr13 10732124 10732240 -109552072 + ORR1B2 LTR MaLR 44 160 -186 3 666 2446 215 56 35 chr13 10732240 10732906 -109551406 - Lx7 LINE L1 -1312 6384 5705 3 666 833 111 10 13 chr13 10732907 10733076 -109551236 - ORR1A3 LTR MaLR 0 394 215 3 666 4700 162 100 14 chr13 10733092 10734116 -109550196 - Lx7 LINE L1 -270 5610 4499 3 666 1499 240 83 50 chr13 10734183 10734723 -109549589 + L1_Mur3 LINE L1 526 1083 -6629 3 666 216 67 0 0 chr13 10734725 10734755 -109549557 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 666 7933 120 35 10 chr13 10735244 10736594 -109547718 - Lx4A LINE L1 -1 5876 4494 3 666 6663 135 53 11 chr13 10736597 10737731 -109546581 + Lx4A LINE L1 5877 7057 -1 3 666 203 0 37 0 chr13 10737737 10737764 -109546548 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 3 666 205 257 14 0 chr13 10739474 10739544 -109544768 + (CAGA)n Simple_repeat Simple_repeat 4 74 0 3 666 504 314 56 34 chr13 10739623 10739890 -109544422 - B4A SINE B4 -18 274 2 3 666 4514 164 43 82 chr13 10740529 10741468 -109542844 - RMER19B LTR ERVK 0 902 1 4 666 267 31 0 0 chr13 10741515 10741547 -109542765 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 666 25456 83 4 92 chr13 10742047 10742554 -109541758 - L1Md_F LINE L1 -564 5319 4815 4 666 2038 170 42 40 chr13 10742554 10742958 -109541354 + RLTR44A LTR ERVK 1 405 0 4 666 25456 109 16 73 chr13 10742958 10743968 -109540344 - L1Md_F LINE L1 -1069 4814 3805 4 666 2179 119 3 74 chr13 10743968 10744358 -109539954 - RLTR13A3 LTR ERVK 0 978 617 4 83 25456 109 16 73 chr13 10744358 10747948 -109536364 - L1Md_F LINE L1 -1069 3804 210 4 667 279 348 104 52 chr13 10748217 10748429 -109535883 + MLT1A LTR MaLR 31 253 -121 4 667 701 344 45 25 chr13 10748582 10748868 -109535444 - B4A SINE B4 0 292 1 4 667 589 279 15 0 chr13 10749239 10749375 -109534937 + ID_B1 SINE B4 81 218 -6 4 667 283 23 0 43 chr13 10749378 10749424 -109534888 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 667 599 233 94 20 chr13 10749433 10749582 -109534730 + RSINE1 SINE B4 6 165 0 4 667 690 316 75 8 chr13 10750233 10750488 -109533824 + B4 SINE B4 3 274 -18 4 667 525 32 0 0 chr13 10751567 10751630 -109532682 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 667 423 0 0 0 chr13 10751630 10751676 -109532636 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 667 23 0 0 0 chr13 10752559 10752582 -109531730 + AT_rich Low_complexity Low_complexity 1 23 0 4 667 542 219 141 33 chr13 10752634 10752818 -109531494 + B3 SINE B2 2 205 -11 4 667 320 312 66 61 chr13 10753252 10753450 -109530862 + LTR87 LTR ERVL? 354 552 -72 4 667 251 309 93 31 chr13 10753526 10753623 -109530689 + ORR1E LTR MaLR 9 111 -248 4 667 390 85 0 0 chr13 10753663 10753722 -109530590 + (TCTG)n Simple_repeat Simple_repeat 4 62 0 4 667 2676 95 47 5 chr13 10753805 10754010 -109530302 + BGLII LTR ERVK 1 205 -216 4 667 537 16 0 0 chr13 10754010 10754072 -109530240 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 667 2676 95 47 5 chr13 10754072 10754270 -109530042 + BGLII LTR ERVK 206 419 -2 4 667 540 0 0 0 chr13 10754344 10754404 -109529908 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 4 667 1093 296 23 23 chr13 10755033 10755382 -109528930 - Lx8 LINE L1 -752 6721 6373 4 667 551 311 168 33 chr13 10756370 10756703 -109527609 - MTE2b LTR MaLR -1 378 1 4 667 226 255 0 0 chr13 10757175 10757226 -109527086 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 4 667 442 141 12 0 chr13 10757749 10757834 -109526478 - Lx6 LINE L1 -11 7449 7364 4 667 3581 221 27 5 chr13 10757845 10757874 -109526438 - Lx6 LINE L1 -539 6921 6884 4 667 402 21 0 0 chr13 10757874 10757921 -109526391 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 667 3581 221 27 5 chr13 10757921 10758661 -109525651 - Lx6 LINE L1 -577 6883 6136 4 667 372 22 0 0 chr13 10758692 10758737 -109525575 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 667 451 309 65 19 chr13 10758741 10758896 -109525416 - B3A SINE B2 -36 162 1 4 667 307 362 72 62 chr13 10758924 10759230 -109525082 + L1MEf LINE L1 1177 1485 -4715 4 667 700 312 63 4 chr13 10759549 10759803 -109524509 + B4A SINE B4 1 269 -23 4 667 435 113 0 0 chr13 10759803 10759874 -109524438 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 667 2472 83 26 0 chr13 10759924 10760272 -109524040 + IAPEY2_LTR LTR ERVK 1 357 0 4 667 302 291 68 126 chr13 10760631 10760941 -109523371 + B4A SINE B4 1 292 0 4 667 225 224 0 0 chr13 10760941 10760999 -109523313 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 667 571 327 36 0 chr13 10761825 10761993 -109522319 - B3A SINE B2 -24 174 1 4 667 352 350 31 54 chr13 10763247 10763377 -109520935 + B4 SINE B4 148 274 -18 4 667 288 0 0 0 chr13 10763390 10763422 -109520890 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 667 22 35 0 0 chr13 10763726 10763755 -109520557 + AT_rich Low_complexity Low_complexity 1 29 0 4 667 1123 77 0 0 chr13 10764564 10764698 -109519614 + B1_Mm SINE Alu 5 138 -9 4 667 362 38 0 19 chr13 10764698 10764751 -109519561 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 4 667 6332 233 55 45 chr13 10765310 10767279 -109517033 - Lx7 LINE L1 -56 7640 5614 4 667 330 216 0 0 chr13 10768019 10768093 -109516219 + (TATG)n Simple_repeat Simple_repeat 2 75 0 4 667 22 35 0 0 chr13 10768146 10768175 -109516137 + AT_rich Low_complexity Low_complexity 1 29 0 4 667 682 283 1 21 chr13 10768413 10768595 -109515717 + B3A SINE B2 28 203 -13 4 667 205 161 0 0 chr13 10768595 10768626 -109515686 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 667 28035 76 12 4 chr13 10769101 10773812 -109510500 - L1Md_F2 LINE L1 -6 6576 1826 4 667 303 83 33 16 chr13 10774330 10774391 -109509921 + (TATG)n Simple_repeat Simple_repeat 3 64 0 4 667 806 319 67 16 chr13 10774734 10775049 -109509263 + ORR1E LTR MaLR 4 334 -25 4 667 315 0 0 0 chr13 10775072 10775107 -109509205 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 667 798 262 19 15 chr13 10775884 10776089 -109508223 + B3 SINE B2 1 206 -10 4 667 2423 88 63 33 chr13 10776182 10776581 -109507731 + IAPLTR2a LTR ERVK 1 411 0 4 667 282 111 0 85 chr13 10776583 10776642 -109507670 + IAPEz-int LTR ERVK 3 56 -1931 4 667 985 90 68 62 chr13 10776671 10776848 -109507464 + IAPEz-int LTR ERVK 18 195 -6286 4 667 226 321 0 0 chr13 10776848 10776901 -109507411 + RLTR27 LTR ERVK 223 275 -34 4 667 226 321 0 0 chr13 10776929 10776982 -109507330 + RLTR27 LTR ERVK 223 275 -34 4 667 226 327 0 0 chr13 10777008 10777063 -109507249 + RLTR27 LTR ERVK 221 275 -34 4 667 3163 69 25 16 chr13 10777063 10777629 -109506683 + IAPEz-int LTR ERVK 168 662 -5819 4 667 2064 72 0 0 chr13 10777629 10777907 -109506405 + IAPEz-int LTR ERVK 1359 1636 -4845 4 667 2862 47 0 0 chr13 10777906 10778268 -109506044 + IAPEz-int LTR ERVK 5736 6097 -384 4 667 2336 98 63 33 chr13 10778286 10778685 -109505627 + IAPLTR2a LTR ERVK 1 411 0 4 667 317 359 62 42 chr13 10778837 10779145 -109505167 + L1M2 LINE L1 5062 5375 -768 4 667 229 65 87 0 chr13 10779649 10779695 -109504617 + (TCTCTG)n Simple_repeat Simple_repeat 5 54 0 4 667 641 312 0 0 chr13 10779715 10779853 -109504459 - B4 SINE B4 -10 282 145 4 667 4707 217 58 12 chr13 10781330 10782034 -109502278 - Lx5 LINE L1 -3 7047 6308 4 667 2291 114 6 0 chr13 10782034 10782359 -109501953 + ORR1A2 LTR MaLR 1 327 0 4 667 4707 217 58 12 chr13 10782359 10782770 -109501542 - Lx5 LINE L1 -743 6307 5881 4 667 1751 256 47 69 chr13 10782774 10783327 -109500985 + RMER19C LTR ERVK 71 611 0 4 667 22686 140 41 38 chr13 10783353 10787881 -109496431 - L1_Mm LINE L1 -27 5856 1312 4 667 29548 62 2 5 chr13 10787877 10792493 -109491819 - L1Md_A LINE L1 -855 5028 446 4 667 4594 135 6 76 chr13 10792494 10793359 -109490953 - L1VL4 LINE L1 -5470 832 29 4 667 4651 132 15 62 chr13 10793362 10793664 -109490648 + L1_Mur2 LINE L1 1760 2049 -3828 4 667 534 67 0 0 chr13 10793664 10793739 -109490573 + (CA)n Simple_repeat Simple_repeat 1 75 0 4 667 4651 132 15 62 chr13 10793739 10794393 -109489919 + L1_Mur2 LINE L1 2050 2671 -3206 4 667 504 48 0 0 chr13 10794522 10794585 -109489727 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 667 354 333 7 7 chr13 10794662 10794807 -109489505 - MER99 DNA hAT? -402 429 285 4 667 266 313 132 9 chr13 10794822 10795035 -109489277 - MER99 DNA hAT? -590 241 3 4 667 303 85 0 0 chr13 10795388 10795435 -109488877 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 667 416 266 49 60 chr13 10795592 10795776 -109488536 - B3A SINE B2 -15 183 2 4 667 342 260 0 0 chr13 10796031 10796104 -109488208 - BC1_Mm scRNA scRNA -72 80 8 4 667 277 276 78 48 chr13 10796247 10796350 -109487962 - PB1 SINE Alu -21 106 1 4 667 464 299 48 61 chr13 10797281 10797509 -109486803 + MTE2a LTR MaLR 1 225 -154 4 667 369 298 30 17 chr13 10797545 10797684 -109486628 + MTE2a LTR MaLR 223 389 -32 4 667 369 0 0 0 chr13 10797703 10797744 -109486568 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 667 450 0 0 0 chr13 10797821 10797871 -109486441 + (TTA)n Simple_repeat Simple_repeat 2 51 0 4 667 306 383 41 29 chr13 10797911 10798083 -109486229 - B4A SINE B4 -118 174 1 4 667 34 24 0 0 chr13 10798533 10798574 -109485738 + AT_rich Low_complexity Low_complexity 1 41 0 4 667 310 319 168 40 chr13 10798678 10799054 -109485258 - Lx8 LINE L1 -10 7463 7040 4 667 450 49 0 0 chr13 10799428 10799489 -109484823 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 667 423 274 169 11 chr13 10799763 10799941 -109484371 + MTEb LTR MaLR 156 379 0 4 667 183 42 0 0 chr13 10799959 10799983 -109484329 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 667 318 98 0 0 chr13 10800796 10800847 -109483465 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 667 663 286 80 0 chr13 10800884 10801083 -109483229 + MTEa LTR MaLR 1 215 -164 4 667 263 337 9 19 chr13 10801083 10801189 -109483123 + CT-rich Low_complexity Low_complexity 6 110 0 4 667 21 36 0 0 chr13 10801283 10801311 -109483001 + AT_rich Low_complexity Low_complexity 1 28 0 4 667 640 363 42 2 chr13 10801809 10802237 -109482075 + Lx8 LINE L1 6908 7352 -121 4 667 477 288 8 60 chr13 10802440 10802454 -109481858 + ID_B1 SINE B4 73 198 -26 4 667 540 311 0 0 chr13 10802454 10802573 -109481739 + B1F1 SINE Alu 2 120 -29 4 667 306 0 0 0 chr13 10802597 10802631 -109481681 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 667 29781 88 13 7 chr13 10803686 10808871 -109475441 + L1Md_F2 LINE L1 368 5585 -298 4 667 7595 63 3 8 chr13 10808872 10809861 -109474451 + L1Md_F2 LINE L1 5587 6570 -12 4 667 954 59 22 22 chr13 10810031 10810169 -109474143 + MT2C_Mm LTR ERVL 1 138 -337 4 667 1604 68 0 0 chr13 10810149 10810354 -109473958 + MT2C_Mm LTR ERVL 271 475 0 4 667 3214 3 0 0 chr13 10811240 10811595 -109472717 + L1Md_T LINE L1 6228 6582 0 4 667 205 128 21 21 chr13 10811766 10811814 -109472498 + GA-rich Low_complexity Low_complexity 1 48 0 4 667 1756 118 46 0 chr13 10811870 10812150 -109472162 - Lx3C LINE L1 -98 6878 6586 4 667 419 233 8 94 chr13 10812397 10812525 -109471787 + MLT1A0 LTR MaLR 3 119 -246 4 667 238 307 0 13 chr13 10812649 10812725 -109471587 + MLT1A0 LTR MaLR 300 374 0 4 667 233 258 164 62 chr13 10812886 10813014 -109471298 - MLT1L LTR MaLR -335 275 135 4 667 425 205 9 0 chr13 10813133 10813245 -109471067 + GA-rich Low_complexity Low_complexity 4 116 0 4 667 319 293 75 57 chr13 10813248 10813407 -109470905 + HAL1-3A_ME LINE L1 2284 2445 -413 4 667 728 209 117 102 chr13 10813966 10814282 -109470030 + ORR1E LTR MaLR 19 339 -40 4 667 312 286 139 26 chr13 10814648 10814763 -109469549 - B4 SINE B4 -8 284 157 4 667 1056 144 0 0 chr13 10814825 10814960 -109469352 + (GAA)n Simple_repeat Simple_repeat 1 135 0 4 667 1620 0 0 0 chr13 10814960 10815140 -109469172 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 5 667 1056 67 0 0 chr13 10815140 10815235 -109469077 + (GAA)n Simple_repeat Simple_repeat 1 95 0 5 667 186 133 0 0 chr13 10815240 10815270 -109469042 + (TGG)n Simple_repeat Simple_repeat 3 32 0 5 667 939 287 42 82 chr13 10815312 10815809 -109468503 - Lx8 LINE L1 -699 6774 6298 5 667 518 246 41 36 chr13 10815884 10816103 -109468209 - RLTR15 LTR ERVK -94 265 46 5 667 388 297 57 13 chr13 10816183 10816340 -109467972 - Lx8 LINE L1 -1178 6295 6132 5 667 1578 86 0 0 chr13 10816371 10816580 -109467732 - MTB LTR MaLR 0 400 192 5 667 395 19 0 19 chr13 10816581 10816634 -109467678 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 5 667 3882 107 0 2 chr13 10816634 10817207 -109467105 - L1_Mus4 LINE L1 -33 6603 6032 5 667 1202 121 20 0 chr13 10817201 10817399 -109466913 + L1_Mus4 LINE L1 5805 6006 -630 5 667 1117 95 88 16 chr13 10817401 10817583 -109466729 - MTB LTR MaLR -205 195 1 5 667 464 202 106 72 chr13 10817741 10817949 -109466363 - Lx7 LINE L1 -1790 5906 5692 5 667 512 301 43 29 chr13 10817997 10818137 -109466175 - RSINE1 SINE B4 -21 144 3 5 667 762 294 149 16 chr13 10818711 10818839 -109465473 - ORR1E LTR MaLR -2 357 211 5 667 198 0 0 0 chr13 10818839 10818861 -109465451 + (CTG)n Simple_repeat Simple_repeat 2 23 0 5 667 762 294 149 16 chr13 10818861 10819047 -109465265 - ORR1E LTR MaLR -149 210 2 5 667 22 56 0 0 chr13 10819132 10819168 -109465144 + AT_rich Low_complexity Low_complexity 1 36 0 5 667 623 308 51 17 chr13 10819351 10819526 -109464786 - B3A SINE B2 -17 181 1 5 667 381 339 9 35 chr13 10820054 10820170 -109464142 + RSINE1 SINE B4 3 115 -50 5 667 503 312 58 7 chr13 10820242 10820397 -109463915 + B4A SINE B4 42 204 -88 5 667 183 100 0 0 chr13 10820462 10820492 -109463820 + (CTA)n Simple_repeat Simple_repeat 2 31 0 5 667 782 154 0 7 chr13 10820494 10820644 -109463668 + CT-rich Low_complexity Low_complexity 1 149 0 5 667 5617 60 8 0 chr13 10820784 10821563 -109462749 - L1_Mm LINE L1 -3458 2425 1641 5 667 235 279 0 0 chr13 10821766 10821834 -109462478 + GA-rich Low_complexity Low_complexity 1 68 0 5 667 234 213 21 0 chr13 10821848 10821895 -109462417 - RSINE1 SINE B4 -31 134 87 5 667 658 300 172 9 chr13 10822795 10823119 -109461193 - MTE2b LTR MaLR 0 379 3 5 667 1856 174 170 24 chr13 10823134 10823592 -109460720 - RLTR12B LTR ERVK 0 528 4 5 667 44 0 0 0 chr13 10823945 10823989 -109460323 + AT_rich Low_complexity Low_complexity 1 44 0 5 667 341 58 19 0 chr13 10824046 10824098 -109460214 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 5 667 485 16 16 0 chr13 10824536 10824598 -109459714 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 5 667 278 143 15 60 chr13 10824608 10824675 -109459637 + (TCTCTG)n Simple_repeat Simple_repeat 3 66 0 5 667 426 148 0 0 chr13 10824675 10824776 -109459536 + (TG)n Simple_repeat Simple_repeat 2 102 0 5 667 1245 213 172 9 chr13 10825131 10825456 -109458856 + MTEa LTR MaLR 1 378 -1 5 667 248 291 51 0 chr13 10825876 10825955 -109458357 + BC1_Mm scRNA scRNA 6 88 -64 5 667 261 284 184 36 chr13 10826203 10826371 -109457941 + Lx8 LINE L1 7158 7350 -123 5 667 21 0 0 0 chr13 10826782 10826803 -109457509 + AT_rich Low_complexity Low_complexity 1 21 0 5 667 1109 285 42 70 chr13 10827298 10827683 -109456629 + MTE2a LTR MaLR 4 377 -2 5 667 884 235 12 16 chr13 10828023 10828278 -109456034 + L1_Mur2 LINE L1 883 1136 -5950 5 667 3274 201 26 12 chr13 10828297 10829147 -109455165 + L1_Mur2 LINE L1 1203 2064 -3813 5 667 276 30 0 0 chr13 10829147 10829180 -109455132 + (GA)n Simple_repeat Simple_repeat 2 34 0 5 667 1600 176 12 33 chr13 10829180 10829564 -109454748 + L1_Mur2 LINE L1 2891 3274 -2603 5 667 5408 71 20 1 chr13 10829557 10830302 -109454010 - L1_Mm LINE L1 -261 5622 4864 5 667 5860 74 4 48 chr13 10830298 10831224 -109453088 + L1Md_A LINE L1 440 1325 -5399 5 667 6787 151 4 19 chr13 10831230 10832529 -109451783 + L1_Mur1 LINE L1 3001 4279 -1607 5 667 7356 91 9 0 chr13 10832531 10833686 -109450626 - L1_Mus3 LINE L1 -7 6631 5467 5 667 7530 178 21 46 chr13 10833686 10834167 -109450145 + Lx LINE L1 4265 4735 -1148 5 667 234 0 0 0 chr13 10834167 10834193 -109450119 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 667 7530 178 21 46 chr13 10834193 10835013 -109449299 + Lx LINE L1 4736 5578 -305 5 667 1083 167 5 36 chr13 10835013 10835237 -109449075 + Lx LINE L1 6438 6654 0 5 667 7530 152 2 8 chr13 10835237 10836369 -109447943 + Lx LINE L1 5579 6654 0 5 667 2375 133 113 31 chr13 10836365 10837256 -109447056 - L1_Mur2 LINE L1 -4106 1771 792 5 667 424 271 8 0 chr13 10837229 10837358 -109446954 - L1_Mur2 LINE L1 -6446 640 511 5 667 939 311 75 18 chr13 10837384 10838144 -109446168 - L1M2 LINE L1 -771 5372 4570 5 667 688 273 39 29 chr13 10838215 10838419 -109445893 - B4A SINE B4 -15 277 72 5 667 332 391 80 8 chr13 10838656 10838893 -109445419 + MER20B DNA MER1_type 23 276 -507 5 667 692 284 13 0 chr13 10839016 10839171 -109445141 - ID_B1 SINE B4 -4 220 64 5 667 398 338 0 0 chr13 10839221 10839360 -109444952 - B1F SINE Alu -6 143 5 5 667 285 51 0 0 chr13 10839454 10839493 -109444819 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 5 667 183 80 0 0 chr13 10840529 10840554 -109443758 + (CAGAGA)n Simple_repeat Simple_repeat 4 28 0 5 667 249 57 0 0 chr13 10840561 10840596 -109443716 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 667 477 0 0 0 chr13 10840596 10840648 -109443664 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 667 1886 127 55 10 chr13 10840788 10841097 -109443215 - ORR1A3 LTR MaLR -3 323 1 5 667 4680 53 0 0 chr13 10842859 10843429 -109440883 + L1Md_F2 LINE L1 6000 6569 -13 5 667 243 61 0 0 chr13 10843439 10843472 -109440840 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 5 667 480 279 64 64 chr13 10844143 10844346 -109439966 - B3 SINE B2 -13 203 1 5 667 226 236 103 41 chr13 10844443 10844540 -109439772 - RLTR23 LTR ERV1 -48 382 280 5 667 492 335 60 46 chr13 10845117 10845406 -109438906 - B4 SINE B4 -10 282 3 5 667 540 296 16 22 chr13 10845781 10845964 -109438348 + B3A SINE B2 1 182 -16 5 667 423 201 0 0 chr13 10845964 10846098 -109438214 + (CA)n Simple_repeat Simple_repeat 1 134 0 5 667 311 127 0 27 chr13 10846095 10846168 -109438144 + (CAGAGA)n Simple_repeat Simple_repeat 6 76 0 5 667 204 224 0 0 chr13 10846170 10846237 -109438075 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 667 560 309 73 22 chr13 10846993 10847172 -109437140 - B3A SINE B2 0 198 11 5 667 485 178 12 28 chr13 10847191 10847443 -109436869 + (CA)n Simple_repeat Simple_repeat 1 247 0 5 667 502 225 31 108 chr13 10847737 10847786 -109436526 - B2_Mm2 SINE B2 -8 187 137 5 667 234 0 0 0 chr13 10847786 10847812 -109436500 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 667 502 225 31 108 chr13 10847812 10847956 -109436356 - B2_Mm2 SINE B2 -59 136 9 5 667 423 337 66 16 chr13 10848164 10848587 -109435725 - L1M5 LINE L1 -3277 2869 2426 5 667 320 258 21 0 chr13 10848734 10848831 -109435481 - L1M LINE L1 -952 5392 5294 5 667 2979 77 17 10 chr13 10849049 10849467 -109434845 - BGLII LTR ERVK 0 421 1 5 667 14372 112 7 42 chr13 10849475 10851015 -109433297 + L1_Mus3 LINE L1 3481 4937 -946 5 667 2086 47 0 0 chr13 10851015 10851269 -109433043 - L1Md_F2 LINE L1 -13 6569 6316 5 667 14372 92 78 18 chr13 10851269 10852855 -109431457 + L1_Mus3 LINE L1 4938 6638 0 5 667 287 280 0 47 chr13 10852857 10852943 -109431369 + B3A SINE B2 27 108 -90 5 667 216 0 0 0 chr13 10852970 10852994 -109431318 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 667 333 289 0 10 chr13 10853329 10853538 -109430774 + (TG)n Simple_repeat Simple_repeat 1 206 0 5 667 530 265 72 13 chr13 10853538 10853691 -109430621 - RSINE1 SINE B4 0 165 4 5 667 348 294 80 18 chr13 10854113 10854276 -109430036 + MTEb LTR MaLR 201 373 -6 5 667 249 108 0 0 chr13 10854680 10854717 -109429595 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 667 503 62 38 0 chr13 10855022 10855102 -109429210 - L1Md_F2 LINE L1 0 6582 6500 5 667 706 146 0 26 chr13 10855193 10855306 -109429006 + B2_Mm2 SINE B2 1 110 -85 5 667 549 176 86 23 chr13 10855403 10855531 -109428781 - B1F2 SINE Alu 0 149 14 5 667 231 238 121 77 chr13 10855450 10855541 -109428771 - MT2B LTR ERVL -345 256 162 5 667 35014 45 3 0 chr13 10856041 10861322 -109422990 - L1Md_F3 LINE L1 0 6584 1290 5 667 383 200 29 95 chr13 10861332 10861542 -109422770 - RMER17C LTR ERVK -139 271 76 5 667 2272 196 71 40 chr13 10861556 10862582 -109421730 - L1Md_Gf LINE L1 -5333 1308 236 5 667 424 292 82 18 chr13 10863201 10863372 -109420940 - B3A SINE B2 -16 182 1 5 667 561 217 0 0 chr13 10863420 10863600 -109420712 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 667 613 266 32 87 chr13 10863602 10863820 -109420492 - B3 SINE B2 -10 206 1 5 667 7592 58 17 16 chr13 10863852 10864835 -109419477 + L1Md_F2 LINE L1 5587 6570 -12 5 667 3087 37 79 0 chr13 10865554 10865935 -109418377 - IAPLTR2a LTR ERVK 0 411 1 5 667 696 268 138 18 chr13 10865993 10866319 -109417993 + MTEa LTR MaLR 27 377 -2 5 667 270 0 0 0 chr13 10866325 10866355 -109417957 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 667 227 173 0 19 chr13 10866574 10866627 -109417685 + G-rich Low_complexity Low_complexity 5 56 0 5 667 366 138 0 27 chr13 10866826 10866938 -109417374 + CT-rich Low_complexity Low_complexity 2 110 0 5 667 584 213 71 5 chr13 10867818 10868002 -109416310 + Lx5 LINE L1 6855 7050 0 5 667 31 0 0 0 chr13 10868002 10868033 -109416279 + AT_rich Low_complexity Low_complexity 1 31 0 5 667 1300 240 120 5 chr13 10868175 10868543 -109415769 - MTD LTR MaLR 0 419 10 5 667 606 282 58 49 chr13 10868603 10868824 -109415488 + ORR1D2 LTR MaLR 1 223 -151 5 667 2581 247 121 109 chr13 10868824 10870131 -109414181 - RMER12 LTR ERVK 0 1322 1 5 667 685 180 0 57 chr13 10870143 10870284 -109414028 + ORR1D2 LTR MaLR 237 369 -1 5 667 6002 202 70 5 chr13 10870429 10872255 -109412057 + Lx7 LINE L1 5154 7103 -593 5 667 778 231 120 20 chr13 10872285 10872381 -109411931 + Lx7 LINE L1 7376 7497 -199 5 667 225 0 0 0 chr13 10872381 10872406 -109411906 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 667 778 231 120 20 chr13 10872406 10872601 -109411711 + Lx7 LINE L1 7498 7696 0 5 667 468 315 35 7 chr13 10872969 10873113 -109411199 - B4A SINE B4 -60 232 85 6 667 966 18 0 0 chr13 10873113 10873225 -109411087 + (TG)n Simple_repeat Simple_repeat 1 112 0 6 667 454 360 69 14 chr13 10873225 10873299 -109411013 - B4 SINE B4 -208 84 2 6 667 752 324 74 4 chr13 10874118 10874375 -109409937 + B4A SINE B4 14 288 -4 6 667 1213 235 16 16 chr13 10874572 10874888 -109409424 + Lx9 LINE L1 6711 7026 -618 6 667 373 254 79 35 chr13 10874940 10875054 -109409258 - B3A SINE B2 -79 119 1 6 667 415 220 13 135 chr13 10875471 10875646 -109408666 + B4 SINE B4 3 143 -81 6 667 640 297 74 22 chr13 10876085 10876354 -109407958 + B4 SINE B4 2 284 -8 6 667 441 318 6 37 chr13 10876793 10876956 -109407356 - RSINE1 SINE B4 -4 161 4 6 667 512 57 0 0 chr13 10877265 10877335 -109406977 - B1_Mm SINE Alu 0 147 78 6 667 623 62 0 0 chr13 10877458 10877538 -109406774 + B2_Mm1t SINE B2 2 81 -112 6 667 216 0 0 0 chr13 10877548 10877572 -109406740 + (A)n Simple_repeat Simple_repeat 1 24 0 6 667 698 279 151 0 chr13 10877640 10877812 -109406500 - B3 SINE B2 -6 210 13 6 668 283 125 70 18 chr13 10879773 10879830 -109404482 - tRNA-Arg-CGY_ tRNA tRNA -15 61 2 6 668 2773 36 9 0 chr13 10879830 10880165 -109404147 + L1_Mus1 LINE L1 6230 6567 0 6 668 517 314 90 109 chr13 10880184 10880541 -109403771 + ORR1E LTR MaLR 6 355 -4 6 668 409 300 318 0 chr13 10882447 10882667 -109401645 - B4A SINE B4 -2 290 1 6 668 706 270 14 39 chr13 10883337 10883545 -109400767 + ID_B1 SINE B4 22 224 0 6 668 24 53 0 0 chr13 10883877 10883915 -109400397 + AT_rich Low_complexity Low_complexity 1 38 0 6 668 1145 265 50 112 chr13 10884415 10884516 -109399796 + MTE2a LTR MaLR 1 65 -314 6 668 2202 111 6 58 chr13 10884516 10884860 -109399452 + ORR1A2 LTR MaLR 2 327 0 6 668 1145 265 50 112 chr13 10884860 10885161 -109399151 + MTE2a LTR MaLR 66 378 -1 6 668 626 254 7 3 chr13 10886361 10886672 -109397640 + (TG)n Simple_repeat Simple_repeat 1 312 0 6 668 231 230 0 0 chr13 10886691 10886778 -109397534 + (TG)n Simple_repeat Simple_repeat 1 87 0 6 668 702 268 0 31 chr13 10886778 10886940 -109397372 - RSINE1 SINE B4 0 165 9 6 668 309 344 6 48 chr13 10887030 10887195 -109397117 + ERVL-E-int LTR ERVL 2278 2435 -3232 6 668 516 318 25 25 chr13 10887264 10887461 -109396851 - B3A SINE B2 0 198 2 6 668 280 313 152 0 chr13 10887691 10887790 -109396522 + PB1D10 SINE Alu 2 115 -2 6 668 1307 301 14 19 chr13 10887906 10888333 -109395979 + Lx8 LINE L1 6925 7349 -124 6 668 2105 82 38 65 chr13 10888452 10888793 -109395519 - IAPLTR1a_Mm LTR ERVK -5 332 1 6 668 54219 16 11 4 chr13 10888793 10895227 -109389085 - IAPEz-int LTR ERVK 0 6481 6 6 668 2098 85 38 65 chr13 10895227 10895568 -109388744 - IAPLTR1a_Mm LTR ERVK -5 332 1 6 668 568 329 26 97 chr13 10896119 10896500 -109387812 - MLT1B LTR MaLR 0 390 37 6 668 476 296 7 15 chr13 10897040 10897177 -109387135 + B3A SINE B2 8 143 -55 6 668 387 0 0 0 chr13 10897182 10897225 -109387087 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 668 417 81 0 0 chr13 10897225 10897286 -109387026 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 668 1459 70 5 10 chr13 10898504 10898706 -109385606 + L1_Mus2 LINE L1 6365 6565 -1 6 668 936 65 0 0 chr13 10898709 10898833 -109385479 + (GGAAA)n Simple_repeat Simple_repeat 2 125 0 6 668 294 254 14 102 chr13 10899206 10899324 -109384988 - B1F1 SINE Alu -26 123 17 6 668 6650 88 15 3 chr13 10900026 10901002 -109383310 + L1_Mus4 LINE L1 5649 6636 0 6 668 1326 246 23 15 chr13 10902943 10903286 -109381026 + Lx6 LINE L1 7088 7433 -27 6 668 765 284 64 48 chr13 10903484 10903920 -109380392 + L1_Rod LINE L1 5357 5799 -48 6 668 641 214 73 0 chr13 10904008 10904200 -109380112 - Lx9 LINE L1 -7 7637 7432 6 668 587 288 20 33 chr13 10904307 10904458 -109379854 - RSINE1 SINE B4 -14 151 3 6 668 245 277 10 0 chr13 10904858 10904959 -109379353 + CT-rich Low_complexity Low_complexity 6 107 0 6 668 3892 209 20 46 chr13 10904990 10905844 -109378468 - Lx6 LINE L1 -2 7458 6627 6 668 1262 198 20 8 chr13 10905843 10906088 -109378224 + Lx6 LINE L1 6100 6347 -1113 6 668 249 211 141 0 chr13 10906620 10906691 -109377621 - B3A SINE B2 -115 83 3 6 668 241 374 49 22 chr13 10908629 10908812 -109375500 - L4 LINE RTE -566 1463 1276 6 668 438 298 14 7 chr13 10908979 10909121 -109375191 + B1F SINE Alu 4 146 -3 6 668 339 25 0 0 chr13 10909121 10909161 -109375151 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 668 210 154 0 0 chr13 10909162 10909201 -109375111 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 6 668 443 210 0 16 chr13 10909205 10909315 -109374997 + GA-rich Low_complexity Low_complexity 3 112 0 6 668 1289 68 6 0 chr13 10909315 10909492 -109374820 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 6 668 443 210 0 16 chr13 10909492 10909507 -109374805 + polypurine Low_complexity Low_complexity 113 126 0 6 668 504 248 85 34 chr13 10909805 10910297 -109374015 + L1M2 LINE L1 4958 5481 -816 6 668 379 242 58 33 chr13 10910641 10910870 -109373442 + RLTR15 LTR ERVK 48 249 -110 6 668 29 0 0 0 chr13 10911291 10911320 -109372992 + AT_rich Low_complexity Low_complexity 1 29 0 6 668 498 33 0 0 chr13 10911822 10911882 -109372430 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 668 357 262 36 27 chr13 10911897 10912007 -109372305 - B3 SINE B2 -104 112 2 6 668 451 288 15 53 chr13 10912292 10912424 -109371888 - B4A SINE B4 -164 128 2 6 668 259 288 75 15 chr13 10912424 10912558 -109371754 - L1M2 LINE L1 -811 5480 5339 6 668 301 268 26 18 chr13 10912560 10912674 -109371638 + L1M2 LINE L1 5102 5216 -927 6 668 408 277 18 0 chr13 10912859 10912971 -109371341 - RSINE1 SINE B4 -44 121 8 6 668 2227 195 5 0 chr13 10913325 10913740 -109370572 - MTC LTR MaLR -2 419 3 6 668 245 287 20 60 chr13 10913835 10913935 -109370377 - L1MEg1 LINE L1 -5587 648 553 6 668 189 0 0 0 chr13 10914281 10914302 -109370010 + (GA)n Simple_repeat Simple_repeat 1 21 0 6 668 420 307 79 6 chr13 10914521 10914685 -109369627 - B3A SINE B2 -18 180 5 6 668 1200 35 7 0 chr13 10915123 10915264 -109369048 + B1_Mm SINE Alu 1 142 -5 6 668 504 152 0 0 chr13 10915266 10915365 -109368947 + A-rich Low_complexity Low_complexity 1 99 0 6 668 1131 253 80 32 chr13 10915637 10916037 -109368275 - MTD LTR MaLR 0 419 1 6 668 782 184 0 70 chr13 10917534 10917692 -109366620 - B1_Mur3 SINE Alu -1 148 2 6 668 3805 151 14 0 chr13 10917732 10918383 -109365929 + Lx4B LINE L1 6328 7056 -2 6 668 784 262 28 145 chr13 10918504 10918932 -109365380 + MTE2a LTR MaLR 2 379 0 6 668 426 39 0 0 chr13 10919187 10919239 -109365073 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 668 536 171 7 0 chr13 10919239 10919379 -109364933 + GA-rich Low_complexity Low_complexity 1 141 0 6 668 1175 109 27 0 chr13 10919814 10919997 -109364315 - B2_Mm2 SINE B2 -5 190 3 6 668 8320 141 22 9 chr13 10920386 10922014 -109362298 - Lx2B LINE L1 -6 6994 5359 6 668 31838 84 14 9 chr13 10922014 10928078 -109356234 - L1Md_F2 LINE L1 -12 6570 480 6 668 351 159 16 0 chr13 10928078 10928141 -109356171 - L1VL1 LINE L1 -6156 266 203 6 668 1306 157 25 7 chr13 10928125 10928401 -109355911 - Lx2B LINE L1 -497 5380 5100 6 668 1040 271 135 15 chr13 10929345 10929678 -109354634 + MTEa LTR MaLR 3 375 -4 6 668 329 62 21 0 chr13 10929697 10929745 -109354567 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 6 668 1073 30 0 0 chr13 10929745 10929877 -109354435 - B1_Mm SINE Alu -9 138 7 6 668 680 179 309 0 chr13 10930116 10930278 -109354034 + B3 SINE B2 5 216 0 6 668 336 343 44 101 chr13 10930461 10930508 -109353804 - RSINE1 SINE B4 0 165 124 6 668 225 0 0 0 chr13 10930508 10930533 -109353779 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 668 261 0 0 0 chr13 10930533 10930561 -109353751 + (GA)n Simple_repeat Simple_repeat 1 29 0 6 668 336 343 44 101 chr13 10930561 10930671 -109353641 - RSINE1 SINE B4 -42 123 17 6 668 256 309 24 0 chr13 10930803 10930929 -109353383 + ERVL-int LTR ERVL 5458 5586 -171 6 668 244 344 43 0 chr13 10931085 10931178 -109353134 + MLT2B2 LTR ERVL 37 133 -382 6 668 280 386 56 60 chr13 10931196 10931411 -109352901 + MLT2B2 LTR ERVL 192 405 -110 6 668 216 321 36 45 chr13 10932310 10932421 -109351891 + MIRb SINE MIR 111 220 -48 6 668 1528 169 21 3 chr13 10932616 10932907 -109351405 - Lx5 LINE L1 -610 6440 6145 6 668 2164 103 12 61 chr13 10932907 10933180 -109351132 + ORR1A2 LTR MaLR 2 278 -49 6 668 3574 65 20 0 chr13 10933180 10933638 -109350674 + L1_Mus2 LINE L1 6099 6565 -1 6 668 2164 103 12 61 chr13 10933638 10933706 -109350606 + ORR1A2 LTR MaLR 279 326 -1 6 668 2577 135 85 2 chr13 10933708 10934191 -109350121 - Lx5 LINE L1 -908 6142 5620 6 668 542 226 0 0 chr13 10934722 10934815 -109349497 + B1F2 SINE Alu 3 95 -54 6 668 389 286 80 48 chr13 10934815 10934847 -109349465 + B4A SINE B4 88 216 -76 6 668 2973 55 0 13 chr13 10935236 10935626 -109348686 + L1Md_F2 LINE L1 6198 6582 0 6 668 409 281 173 71 chr13 10935635 10935861 -109348451 - MT2A LTR ERVL -102 431 183 6 668 477 294 40 0 chr13 10936111 10936237 -109348075 - B1_Mur2 SINE Alu -14 135 5 6 668 21 0 0 0 chr13 10936431 10936452 -109347860 + AT_rich Low_complexity Low_complexity 1 21 0 6 668 1100 76 7 0 chr13 10937318 10937463 -109346849 + B1_Mus2 SINE Alu 2 147 0 6 668 208 161 0 31 chr13 10937474 10937538 -109346774 + A-rich Low_complexity Low_complexity 4 65 0 6 668 530 309 40 68 chr13 10937579 10937801 -109346511 - B3 SINE B2 0 216 1 6 668 6159 9 0 6 chr13 10938282 10938974 -109345338 - L1Md_T LINE L1 0 6582 5895 6 668 22 0 0 0 chr13 10939046 10939068 -109345244 + AT_rich Low_complexity Low_complexity 1 22 0 6 668 1242 52 0 65 chr13 10939588 10939774 -109344538 - L1_Mus1 LINE L1 0 6567 6394 6 668 333 68 0 0 chr13 10939987 10940031 -109344281 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 7 668 568 144 56 39 chr13 10940033 10940213 -109344099 - RMER17C LTR ERVK -137 273 91 7 668 280 250 0 15 chr13 10940739 10940804 -109343508 + ID4_ SINE ID 2 65 -18 7 668 198 0 0 0 chr13 10941517 10941539 -109342773 + (T)n Simple_repeat Simple_repeat 1 22 0 7 668 876 289 68 82 chr13 10941575 10941929 -109342383 + MTEa LTR MaLR 31 379 0 7 668 401 0 20 0 chr13 10942008 10942057 -109342255 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 668 250 250 21 0 chr13 10943893 10943941 -109340371 + B4A SINE B4 236 284 -8 7 668 252 254 28 14 chr13 10943960 10944032 -109340280 + (CATA)n Simple_repeat Simple_repeat 4 76 0 7 668 289 235 29 14 chr13 10944918 10944987 -109339325 + B2_Mm2 SINE B2 1 70 -125 7 668 1842 195 93 5 chr13 10944997 10945384 -109338928 - MTC LTR MaLR 0 421 1 7 668 416 270 22 0 chr13 10945384 10945473 -109338839 + B3 SINE B2 116 206 -10 7 668 339 25 0 0 chr13 10946711 10946751 -109337561 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 668 280 261 47 100 chr13 10947211 10947381 -109336931 + RLTR41 LTR ERV1 251 411 -35 7 668 3370 230 89 1 chr13 10948363 10949169 -109335143 - Lx6 LINE L1 -4 7456 6580 7 668 2975 123 47 4 chr13 10949169 10949635 -109334677 + RLTR21 LTR ERVK 1 486 -1086 7 668 562 15 0 0 chr13 10949635 10949701 -109334611 - L1Md_F3 LINE L1 -930 5654 5589 7 668 7170 32 6 9 chr13 10949701 10949874 -109334438 + L1Md_F3 LINE L1 5708 5876 -708 7 668 2873 78 16 163 chr13 10949874 10950439 -109333873 + RLTR45 LTR ERVK 1 482 0 7 668 7170 32 6 9 chr13 10950439 10951145 -109333167 + L1Md_F3 LINE L1 5877 6584 0 7 668 4103 169 43 32 chr13 10951145 10952004 -109332308 + RLTR21 LTR ERVK 452 1315 -257 7 668 384 97 0 0 chr13 10952004 10952066 -109332246 + (TATG)n Simple_repeat Simple_repeat 1 62 0 7 668 1793 208 64 71 chr13 10952066 10952102 -109332210 + RLTR21 LTR ERVK 1255 1290 -282 7 668 462 49 0 0 chr13 10952102 10952163 -109332149 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 668 1793 208 64 71 chr13 10952163 10952441 -109331871 + RLTR21 LTR ERVK 1291 1572 0 7 668 2188 270 68 21 chr13 10952442 10953210 -109331102 - Lx6 LINE L1 -876 6584 5775 7 668 210 286 14 14 chr13 10953665 10953736 -109330576 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 7 668 531 327 13 0 chr13 10954274 10954427 -109329885 + RSINE1 SINE B4 11 165 0 7 668 528 267 0 0 chr13 10954447 10954627 -109329685 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 668 344 333 88 6 chr13 10954744 10954904 -109329408 + MLT1B LTR MaLR 92 264 -126 7 668 539 253 63 26 chr13 10955285 10955476 -109328836 + B3A SINE B2 1 198 0 7 668 408 55 0 0 chr13 10956452 10956507 -109327805 + L1Md_F2 LINE L1 5156 5210 -673 7 668 2024 25 0 0 chr13 10956507 10956750 -109327562 + L1Md_F2 LINE L1 5344 5586 -297 7 668 8285 36 2 3 chr13 10956751 10957733 -109326579 + L1Md_F2 LINE L1 5588 6568 -14 7 668 1182 182 0 4 chr13 10957805 10958037 -109326275 + L1Md_F LINE L1 104 334 -6282 7 668 3072 68 2 0 chr13 10958029 10958444 -109325868 + L1Md_F LINE L1 670 1085 -5531 7 668 2545 97 116 36 chr13 10958444 10958884 -109325428 - IAPLTR2_Mm LTR ERVK 0 475 1 7 668 25250 12 2 0 chr13 10958884 10961835 -109322477 - IAPEz-int LTR ERVK 0 6481 3525 7 668 884 73 24 0 chr13 10961835 10961958 -109322354 - IAPEz-int LTR ERVK -2770 4910 4785 7 668 1753 104 8 4 chr13 10961955 10962216 -109322096 - IAPEz-int LTR ERVK -5183 2497 2236 7 668 424 38 0 0 chr13 10962215 10962268 -109322044 - IAPEz-int LTR ERVK -5070 1411 1359 7 668 4825 52 0 55 chr13 10962268 10962960 -109321352 - IAPEz-int LTR ERVK -5819 662 9 7 668 2551 95 96 38 chr13 10962961 10963410 -109320902 - IAPLTR2_Mm LTR ERVK 0 475 1 7 668 20024 63 5 1 chr13 10963410 10966292 -109318020 + L1Md_F LINE L1 1104 3997 -1886 7 668 35 0 0 0 chr13 10966940 10966975 -109317337 + AT_rich Low_complexity Low_complexity 1 35 0 7 668 1929 182 147 20 chr13 10966983 10967431 -109316881 - RLTR12B LTR ERVK -23 505 1 7 668 408 40 0 0 chr13 10967636 10967686 -109316626 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 668 730 305 49 5 chr13 10968854 10969078 -109315234 - B4A SINE B4 -58 234 1 7 668 649 328 31 33 chr13 10969142 10969461 -109314851 + RLTR18B LTR ERVK 180 601 -15 7 668 239 256 144 0 chr13 10969455 10969545 -109314767 + B1_Mur2 SINE Alu 19 121 -28 7 668 422 245 0 10 chr13 10969471 10969570 -109314742 + ID_B1 SINE B4 126 223 -1 7 668 552 230 133 41 chr13 10970889 10971084 -109313228 + B3 SINE B2 4 216 0 7 668 279 0 0 0 chr13 10971807 10971838 -109312474 + (CAG)n Simple_repeat Simple_repeat 1 31 0 7 668 405 39 0 0 chr13 10971838 10971889 -109312423 + (GGA)n Simple_repeat Simple_repeat 3 53 0 7 668 594 75 0 0 chr13 10972115 10972195 -109312117 + (TA)n Simple_repeat Simple_repeat 2 81 0 7 668 594 268 43 0 chr13 10972205 10972343 -109311969 + RSINE1 SINE B4 8 151 -14 7 668 209 57 0 28 chr13 10972360 10972396 -109311916 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 668 376 293 80 76 chr13 10972418 10972706 -109311606 + L1M5 LINE L1 3903 4191 -1955 7 668 4360 14 2 12 chr13 10973363 10973861 -109310451 + MT2_Mm LTR ERVL 1 493 0 7 668 2127 16 0 0 chr13 10973861 10974113 -109310199 + MERVL-int LTR ERVL 1 252 -5233 7 668 38240 16 9 0 chr13 10974108 10978616 -109305696 + MERVL-int LTR ERVL 813 5360 -125 7 668 373 179 46 35 chr13 10978616 10978703 -109305609 + ORR1A3-int LTR MaLR 553 640 -1323 7 668 302 0 0 0 chr13 10978703 10978741 -109305571 + MERVL-int LTR ERVL 5448 5485 0 7 668 4360 14 2 12 chr13 10978741 10979239 -109305073 + MT2_Mm LTR ERVL 1 493 0 7 668 292 257 71 0 chr13 10979281 10979351 -109304961 - ID4 SINE ID 0 83 9 7 668 259 336 37 22 chr13 10979441 10979575 -109304737 + L2 LINE L2 2247 2382 -1037 7 668 623 235 23 62 chr13 10979632 10979809 -109304503 + ORR1C2 LTR MaLR 21 190 -188 7 668 284 176 15 0 chr13 10979833 10979901 -109304411 + CT-rich Low_complexity Low_complexity 2 70 0 7 668 915 173 122 25 chr13 10979902 10980098 -109304214 + ORR1C2 LTR MaLR 167 381 -3 7 668 601 331 58 35 chr13 10980331 10980588 -109303724 + B4A SINE B4 3 265 -27 7 668 234 0 0 0 chr13 10980645 10980671 -109303641 + (TC)n Simple_repeat Simple_repeat 1 26 0 7 668 482 0 17 0 chr13 10980673 10980731 -109303581 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 668 761 254 229 26 chr13 10981234 10981618 -109302694 + RMER20B LTR ERVK 128 589 -38 7 668 259 152 0 60 chr13 10982092 10982176 -109302136 + C-rich Low_complexity Low_complexity 5 83 0 7 668 504 162 0 0 chr13 10982821 10982926 -109301386 + (TG)n Simple_repeat Simple_repeat 1 105 0 7 668 289 296 184 0 chr13 10982970 10983068 -109301244 + PB1D10 SINE Alu 2 117 0 7 668 792 239 377 3 chr13 10983378 10983683 -109300629 + MTD LTR MaLR 1 419 0 7 668 27 0 0 0 chr13 10983951 10983978 -109300334 + AT_rich Low_complexity Low_complexity 1 27 0 7 668 364 288 96 67 chr13 10984032 10984560 -109299752 + L1M2 LINE L1 4207 4827 -1313 7 668 1789 142 77 85 chr13 10985030 10985291 -109299021 + RMER10B LTR ERVL 1 249 -149 7 668 2873 68 32 29 chr13 10985291 10985701 -109298611 - RLTR10A LTR ERVK 0 411 1 7 668 1789 142 77 85 chr13 10985701 10985796 -109298516 + RMER10B LTR ERVL 250 339 -59 7 668 189 0 0 0 chr13 10985796 10985817 -109298495 + (CTAAT)n Simple_repeat Simple_repeat 2 22 0 7 668 1789 142 77 85 chr13 10985817 10985860 -109298452 + RMER10B LTR ERVL 340 397 -1 7 668 1059 126 57 6 chr13 10985871 10986047 -109298265 - RMER10B LTR ERVL -213 185 1 7 668 227 368 45 71 chr13 10986999 10987048 -109297264 + MT2B2 LTR ERVL 113 157 -427 7 668 564 306 20 46 chr13 10987048 10987199 -109297113 + B1F1 SINE Alu 3 149 0 7 668 320 242 0 104 chr13 10987514 10987637 -109296675 + B1F SINE Alu 3 139 -10 7 668 231 36 0 0 chr13 10987870 10987898 -109296414 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 668 194 91 0 29 chr13 10987984 10988018 -109296294 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 7 668 530 325 19 0 chr13 10988033 10988245 -109296067 - ID_B1 SINE B4 -5 219 4 7 668 1115 240 163 12 chr13 10989009 10989334 -109294978 + MTEa LTR MaLR 4 377 -2 7 668 615 233 51 21 chr13 10989437 10989627 -109294685 - B3A SINE B2 0 195 3 7 668 619 172 15 0 chr13 10990295 10990429 -109293883 + GA-rich Low_complexity Low_complexity 1 136 0 7 668 212 167 24 0 chr13 10990968 10991010 -109293302 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 668 238 203 237 0 chr13 10991621 10991680 -109292632 + ID4_ SINE ID 2 74 -9 7 668 25 31 0 0 chr13 10992006 10992038 -109292274 + AT_rich Low_complexity Low_complexity 1 32 0 7 668 295 271 81 23 chr13 10993045 10993132 -109291180 + B1F1 SINE Alu 9 100 -49 7 668 792 264 51 10 chr13 10993381 10993576 -109290736 - MTEa LTR MaLR 0 379 177 7 668 356 219 113 9 chr13 10993596 10993702 -109290610 - MTEa LTR MaLR -262 117 1 7 668 469 244 94 153 chr13 10993747 10994094 -109290218 - ORR1E LTR MaLR -13 366 7 7 668 279 0 0 0 chr13 10995382 10995413 -109288899 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 668 958 230 0 0 chr13 10996195 10996373 -109287939 - URR1B DNA MER1_type -41 184 7 7 668 447 308 90 59 chr13 10996379 10996551 -109287761 + MLT1B LTR MaLR 31 200 -190 7 668 567 0 0 0 chr13 10996551 10996614 -109287698 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 668 447 308 90 59 chr13 10996614 10996628 -109287684 + MLT1B LTR MaLR 201 210 -180 7 668 450 0 0 0 chr13 10996628 10996678 -109287634 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 668 447 308 90 59 chr13 10996678 10996811 -109287501 + MLT1B LTR MaLR 211 361 -29 7 668 217 206 32 0 chr13 10996939 10997002 -109287310 + (TA)n Simple_repeat Simple_repeat 1 65 0 7 668 393 259 121 0 chr13 10997019 10997135 -109287177 + ID_B1 SINE B4 90 219 -5 7 668 354 282 0 0 chr13 10997135 10997220 -109287092 + BC1_Mm scRNA scRNA 9 93 -59 7 668 747 283 137 42 chr13 10998157 10998493 -109285819 + RLTR9A LTR ERVK 1 368 0 7 668 228 295 0 0 chr13 10998775 10998836 -109285476 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 668 272 233 13 40 chr13 10999599 10999675 -109284637 + PB1D10 SINE Alu 22 95 -22 7 668 507 137 18 8 chr13 10999762 10999874 -109284438 + ORR1A2 LTR MaLR 12 141 -253 7 668 680 150 39 32 chr13 10999852 10999999 -109284313 + ORR1A2 LTR MaLR 28 175 -171 7 668 1292 60 0 6 chr13 11000001 11000168 -109284144 + ORR1A3 LTR MaLR 161 326 0 1 668 407 272 65 75 chr13 11001628 11001827 -109282485 - B3A SINE B2 0 198 2 2 668 22 0 0 0 chr13 11003718 11003740 -109280572 + AT_rich Low_complexity Low_complexity 1 22 0 3 668 269 337 11 11 chr13 11004153 11004246 -109280066 + B1_Mus1 SINE Alu 9 101 -47 4 668 240 200 0 0 chr13 11004259 11004309 -109280003 + T-rich Low_complexity Low_complexity 4 53 0 5 668 231 255 57 38 chr13 11004366 11004525 -109279787 + L1_Mur3 LINE L1 4131 4292 -1588 6 668 14119 77 35 8 chr13 11004531 11004727 -109279585 - L1VL4 LINE L1 -454 3105 2916 7 668 2051 148 77 23 chr13 11004727 11005115 -109279197 + RLTR9E LTR ERVK 1 409 0 8 668 14119 84 26 7 chr13 11005115 11007765 -109276547 - L1VL4 LINE L1 -644 2915 203 7 668 551 322 14 0 chr13 11009709 11009855 -109274457 + RSINE1 SINE B4 1 148 -17 9 668 443 167 49 0 chr13 11009858 11010002 -109274310 + (TCTCTG)n Simple_repeat Simple_repeat 4 154 0 1 83 225 162 53 13 chr13 11010025 11010100 -109274212 + A-rich Low_complexity Low_complexity 4 81 0 1 669 222 156 0 0 chr13 11010767 11010812 -109273500 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 669 512 284 60 55 chr13 11010820 11011021 -109273291 - B4A SINE B4 0 292 91 1 669 180 111 0 0 chr13 11011784 11011811 -109272501 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 1 669 23 54 0 0 chr13 11011843 11011880 -109272432 + AT_rich Low_complexity Low_complexity 1 37 0 1 669 447 221 32 0 chr13 11012090 11012185 -109272127 - Lx6 LINE L1 -790 6670 6573 1 669 2834 184 50 28 chr13 11012184 11012828 -109271484 + L1_Mur3 LINE L1 5120 5777 -103 1 669 549 189 19 8 chr13 11014248 11014373 -109269939 - MLT1A1 LTR MaLR 0 408 272 1 669 198 0 0 0 chr13 11014604 11014626 -109269686 + (A)n Simple_repeat Simple_repeat 1 22 0 1 669 1103 194 99 105 chr13 11016499 11016851 -109267461 + RMER20B LTR ERVK 243 592 -35 2 669 1161 203 96 18 chr13 11016852 11017133 -109267179 - RMER13B LTR ERVK 0 908 606 2 669 4157 175 58 27 chr13 11017117 11017959 -109266353 + RMER13B LTR ERVK 41 908 0 2 669 593 339 73 59 chr13 11017980 11018334 -109265978 + ORR1E LTR MaLR 1 359 0 2 669 257 348 0 0 chr13 11018390 11018459 -109265853 + RSINE1 SINE B4 9 77 -88 2 669 1814 223 21 79 chr13 11018459 11018835 -109265477 - ORR1B1 LTR MaLR 0 394 40 2 669 3680 67 2 12 chr13 11018835 11019322 -109264990 + L1Md_F2 LINE L1 6089 6570 -12 2 669 1814 223 21 79 chr13 11019322 11019363 -109264949 - ORR1B1 LTR MaLR -355 39 1 2 669 432 300 0 0 chr13 11019364 11019454 -109264858 + RSINE1 SINE B4 74 163 -2 2 669 183 129 0 0 chr13 11019457 11019488 -109264824 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 669 23 54 0 0 chr13 11019560 11019597 -109264715 + AT_rich Low_complexity Low_complexity 1 37 0 2 669 21 0 0 0 chr13 11019931 11019952 -109264360 + AT_rich Low_complexity Low_complexity 1 21 0 2 669 289 326 0 22 chr13 11020321 11020412 -109263900 + MLT1A1 LTR MaLR 26 114 -294 3 669 253 287 80 11 chr13 11020434 11020522 -109263790 + RMER15 LTR ERVL 372 465 -110 3 669 251 321 67 60 chr13 11020681 11020830 -109263482 - RLTR14 LTR ERV1 -8 374 225 3 669 1192 187 23 0 chr13 11021673 11021887 -109262425 - RLTR20A2 LTR ERVK -107 471 253 3 669 368 235 12 0 chr13 11022363 11022438 -109261874 + RMER5 LTR ERV1 1 76 -458 3 669 2243 189 120 25 chr13 11022438 11022879 -109261433 + RLTR20A2 LTR ERVK 1 479 -99 3 669 860 28 9 0 chr13 11022879 11022986 -109261326 + (TG)n Simple_repeat Simple_repeat 2 109 0 3 669 2243 189 120 25 chr13 11022986 11023060 -109261252 + RLTR20A2 LTR ERVK 480 564 -14 3 669 2294 196 18 9 chr13 11023068 11023525 -109260787 + RMER5 LTR ERV1 74 534 0 3 669 840 61 8 15 chr13 11024168 11024302 -109260010 + (GA)n Simple_repeat Simple_repeat 2 134 0 3 669 693 300 29 0 chr13 11024535 11024745 -109259567 + B3 SINE B2 1 216 0 3 669 593 254 41 36 chr13 11025860 11026056 -109258256 - B3A SINE B2 -1 197 1 3 669 311 296 63 108 chr13 11026267 11026427 -109257885 - B3A SINE B2 -2 214 62 4 669 378 134 0 0 chr13 11026893 11026960 -109257352 + (TCC)n Simple_repeat Simple_repeat 1 67 0 4 669 774 251 143 5 chr13 11026960 11027156 -109257156 - ID_B1 SINE B4 0 224 2 4 669 2505 188 35 4 chr13 11027269 11027777 -109256535 - RLTR11A2 LTR ERVK -3 524 1 4 669 489 279 58 11 chr13 11027887 11028061 -109256251 - RMER5 LTR ERV1 0 534 353 4 669 2033 144 19 78 chr13 11028063 11028433 -109255879 - ORR1B1 LTR MaLR 0 394 47 4 669 476 325 35 18 chr13 11028472 11028641 -109255671 - RMER5 LTR ERV1 -250 284 113 4 669 1862 194 29 29 chr13 11029682 11030058 -109254254 - ORR1C1 LTR MaLR 0 378 3 4 669 3283 113 34 6 chr13 11030092 11030617 -109253695 + RLTR13D1 LTR ERVK 4 543 -359 4 669 3983 78 28 12 chr13 11030590 11031161 -109253151 + RLTR13D1 LTR ERVK 227 806 0 4 669 245 267 0 16 chr13 11031504 11031565 -109252747 + RMER15 LTR ERVL 387 446 -129 4 669 533 134 26 26 chr13 11031578 11031731 -109252581 + (TCTCTG)n Simple_repeat Simple_repeat 4 156 0 4 669 225 0 0 0 chr13 11031731 11031756 -109252556 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 669 436 276 79 31 chr13 11031810 11031937 -109252375 + B3 SINE B2 59 191 -25 5 669 211 303 15 0 chr13 11032796 11032862 -109251450 + GA-rich Low_complexity Low_complexity 5 71 0 5 669 334 259 35 26 chr13 11032917 11033032 -109251280 + Lx8 LINE L1 6977 7092 -381 5 669 225 211 0 0 chr13 11034206 11034258 -109250054 + CT-rich Low_complexity Low_complexity 4 55 0 5 669 2379 112 144 25 chr13 11034514 11034945 -109249367 - RLTR45 LTR ERVK 0 482 1 5 669 1120 250 74 63 chr13 11036199 11036549 -109247763 + ORR1E LTR MaLR 4 357 -2 5 669 628 256 84 35 chr13 11037547 11037749 -109246563 - B3 SINE B2 -4 212 1 5 669 351 224 0 13 chr13 11038244 11038321 -109245991 - ID4_ SINE ID -6 77 2 5 669 476 281 188 14 chr13 11038402 11038684 -109245628 - Lx8 LINE L1 -155 7318 6988 5 669 227 227 15 0 chr13 11038684 11038750 -109245562 + CT-rich Low_complexity Low_complexity 4 70 0 6 669 232 199 54 71 chr13 11038750 11038918 -109245394 + RMER17A2 LTR ERVK 277 441 -465 6 669 254 270 27 0 chr13 11038928 11039002 -109245310 + L1_Mur3 LINE L1 2694 2769 -3111 6 669 1076 286 51 43 chr13 11039004 11039588 -109244724 + L1_Rod LINE L1 2754 3342 -2505 6 669 228 279 0 29 chr13 11041193 11041293 -109243019 + G-rich Low_complexity Low_complexity 1 97 0 6 669 352 264 48 108 chr13 11041294 11041460 -109242852 + HAL1-3A_ME LINE L1 2284 2439 -419 6 669 2638 88 32 3 chr13 11041492 11041867 -109242445 + MTB LTR MaLR 1 386 -14 6 669 600 307 33 28 chr13 11041966 11042147 -109242165 - B3A SINE B2 -16 182 1 6 669 376 298 0 21 chr13 11042245 11042341 -109241971 + RSINE1 SINE B4 3 96 -69 6 670 195 184 0 0 chr13 11173777 11173815 -109110497 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 670 240 177 32 0 chr13 11174149 11174211 -109110101 - Lx3C LINE L1 -1023 5953 5890 7 670 3241 184 28 36 chr13 11174216 11174650 -109109662 + Lx3C LINE L1 6334 6761 -215 7 670 333 0 0 0 chr13 11174650 11174687 -109109625 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 670 3241 184 28 36 chr13 11174687 11174889 -109109423 + Lx3C LINE L1 6762 6965 -11 7 670 270 0 0 0 chr13 11174974 11175004 -109109308 + (TC)n Simple_repeat Simple_repeat 1 30 0 7 670 378 0 0 0 chr13 11175004 11175046 -109109266 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 670 612 40 0 0 chr13 11175046 11175120 -109109192 + (TG)n Simple_repeat Simple_repeat 2 76 0 7 670 493 367 0 18 chr13 11175198 11175367 -109108945 - B3A SINE B2 -27 171 6 7 670 497 229 143 66 chr13 11175742 11175924 -109108388 + B3A SINE B2 3 198 0 7 670 530 315 50 46 chr13 11176656 11176959 -109107353 + Lx8 LINE L1 7169 7472 -1 7 670 739 293 37 9 chr13 11177788 11178005 -109106307 + B4A SINE B4 2 224 -68 7 670 1675 253 94 2 chr13 11178022 11178478 -109105834 + Lx8 LINE L1 6618 7115 -358 8 670 246 314 79 34 chr13 11178708 11178797 -109105515 + B4A SINE B4 198 290 -2 7 670 429 36 0 0 chr13 11178802 11178857 -109105455 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 670 248 147 107 27 chr13 11178858 11178970 -109105342 + (TAGA)n Simple_repeat Simple_repeat 4 124 0 8 670 1611 136 0 37 chr13 11178974 11179242 -109105070 - RLTR22_Mur LTR ERVK 0 1848 1591 8 670 5762 84 29 4 chr13 11179466 11180287 -109104025 - RLTR22_Mus LTR ERVK -966 842 1 8 670 576 84 0 29 chr13 11180299 11180436 -109103876 + (TAGA)n Simple_repeat Simple_repeat 1 132 0 8 670 211 245 21 21 chr13 11180370 11180466 -109103846 + (CATATA)n Simple_repeat Simple_repeat 5 100 0 8 670 3688 210 69 33 chr13 11180577 11181450 -109102862 + RMER13B LTR ERVK 1 904 -4 8 670 683 264 44 33 chr13 11181532 11181712 -109102600 + B3A SINE B2 1 182 -16 8 670 582 286 6 53 chr13 11182415 11182544 -109101768 + RSINE1 SINE B4 4 129 -36 8 670 1173 121 0 0 chr13 11182544 11182968 -109101344 + (CA)n Simple_repeat Simple_repeat 1 424 0 9 670 582 286 6 53 chr13 11182968 11183004 -109101308 + RSINE1 SINE B4 130 164 -1 8 670 303 333 55 18 chr13 11183516 11183626 -109100686 + ID_B1 SINE B4 79 192 -32 9 670 648 239 11 74 chr13 11183917 11184093 -109100219 + RSINE1 SINE B4 1 165 0 9 670 311 167 16 16 chr13 11185094 11185155 -109099157 + RMER5 LTR ERV1 48 108 -426 9 670 725 216 7 7 chr13 11185159 11185299 -109099013 + RMER5 LTR ERV1 393 532 -2 9 670 6405 56 1 2 chr13 11185567 11186374 -109097938 - L1Md_F2 LINE L1 0 6582 5777 9 670 630 0 0 0 chr13 11186374 11186448 -109097864 + Lx LINE L1 5692 5765 -889 9 670 393 39 0 0 chr13 11186617 11186668 -109097644 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 9 670 291 93 0 0 chr13 11186743 11186786 -109097526 + (CATA)n Simple_repeat Simple_repeat 2 44 0 9 670 233 319 14 14 chr13 11187428 11187501 -109096811 + MER44C DNA MER2_type 25 97 -636 9 670 254 326 40 10 chr13 11190250 11190349 -109093963 + MER44C DNA MER2_type 391 492 -241 9 670 943 242 108 116 chr13 11190382 11190761 -109093551 + MTE2a LTR MaLR 2 377 -2 9 670 1230 268 88 32 chr13 11192504 11192847 -109091465 - MTEa LTR MaLR -15 364 3 1 670 1000 168 111 19 chr13 11192965 11193172 -109091140 - URR1A DNA MER1_type 0 226 1 1 670 335 293 89 45 chr13 11194168 11194325 -109089987 + RSINE1 SINE B4 2 165 0 1 670 31 58 0 0 chr13 11194326 11194378 -109089934 + AT_rich Low_complexity Low_complexity 1 52 0 1 670 201 94 0 0 chr13 11194403 11194435 -109089877 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 1 670 1288 231 115 39 chr13 11194856 11195539 -109088773 + Lx9 LINE L1 5344 6104 -1540 1 670 779 233 134 5 chr13 11195613 11195837 -109088475 + Lx9 LINE L1 6311 6563 -1081 1 670 495 0 0 0 chr13 11195859 11195914 -109088398 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 1 670 438 20 0 0 chr13 11196428 11196479 -109087833 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 670 2801 100 0 0 chr13 11196766 11197187 -109087125 - L1_Mm LINE L1 -341 5542 5122 1 670 1061 237 24 141 chr13 11197767 11198209 -109086103 + MTD LTR MaLR 35 404 -15 1 670 1392 89 21 0 chr13 11198557 11198747 -109085565 + B2_Mm2 SINE B2 1 194 -1 1 670 341 401 50 21 chr13 11199113 11199355 -109084957 + MER47B DNA MER2_type 8 256 -162 1 670 860 281 15 10 chr13 11199779 11199977 -109084335 + ID_B1 SINE B4 5 203 -21 1 670 24 0 0 0 chr13 11200246 11200270 -109084042 + AT_rich Low_complexity Low_complexity 1 24 0 1 670 580 324 20 0 chr13 11201099 11201247 -109083065 + RSINE1 SINE B4 3 153 -12 1 670 203 133 0 0 chr13 11201291 11201321 -109082991 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 1 670 966 100 0 0 chr13 11201321 11201461 -109082851 + (GAAA)n Simple_repeat Simple_repeat 1 140 0 1 670 1050 103 0 20 chr13 11201530 11201541 -109082771 - B1_Mus1 SINE Alu -2 146 138 1 670 333 0 0 0 chr13 11201541 11201578 -109082734 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 670 1050 103 0 20 chr13 11201578 11201714 -109082598 - B1_Mus1 SINE Alu -11 137 2 1 670 1290 274 226 16 chr13 11202350 11203205 -109081107 + Lx5 LINE L1 6005 7039 -11 1 670 605 320 38 31 chr13 11203283 11203573 -109080739 + B4A SINE B4 1 292 0 1 670 6815 50 2 6 chr13 11204759 11205654 -109078658 - L1Md_F2 LINE L1 -2 6580 5689 1 670 609 143 0 33 chr13 11205806 11205987 -109078325 + (TCTCTG)n Simple_repeat Simple_repeat 3 177 0 1 670 588 316 82 41 chr13 11206021 11206288 -109078024 - B4A SINE B4 -2 290 13 1 670 22 35 0 0 chr13 11206726 11206755 -109077557 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 901 210 5 11 chr13 11207012 11207200 -109077112 + URR1B DNA MER1_type 39 225 0 1 670 960 296 71 22 chr13 11208404 11208728 -109075584 + ORR1E LTR MaLR 20 359 0 1 670 400 289 85 43 chr13 11208819 11209007 -109075305 + B3A SINE B2 1 196 -2 1 670 310 355 0 0 chr13 11209752 11209904 -109074408 + (TG)n Simple_repeat Simple_repeat 1 152 0 1 670 465 19 0 0 chr13 11210639 11210693 -109073619 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 670 2261 105 94 56 chr13 11211127 11211519 -109072793 + MTB_Mm LTR MaLR 1 407 0 1 670 1795 185 44 14 chr13 11211653 11212020 -109072292 + ORR1C1 LTR MaLR 1 378 0 1 670 261 0 0 0 chr13 11212044 11212073 -109072239 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 670 279 93 0 0 chr13 11212073 11212115 -109072197 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 670 231 125 0 0 chr13 11212119 11212159 -109072153 + (TCTA)n Simple_repeat Simple_repeat 4 43 0 1 670 253 284 0 18 chr13 11212161 11212272 -109072040 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 670 330 325 18 0 chr13 11212379 11212493 -109071819 - PB1D10 SINE Alu -1 116 1 1 670 340 173 51 51 chr13 11212588 11212823 -109071489 + (TATAA)n Simple_repeat Simple_repeat 1 235 0 1 670 303 137 42 25 chr13 11212854 11212974 -109071338 + (TATAA)n Simple_repeat Simple_repeat 5 126 0 1 670 22 35 0 0 chr13 11212979 11213008 -109071304 + AT_rich Low_complexity Low_complexity 1 29 0 1 670 268 276 29 0 chr13 11213020 11213125 -109071187 + (TA)n Simple_repeat Simple_repeat 1 108 0 1 670 308 312 91 77 chr13 11213185 11213384 -109070928 + MLT1B LTR MaLR 158 382 -8 1 670 294 287 4 57 chr13 11213517 11213617 -109070695 + PB1D7 SINE Alu 18 115 -34 1 670 718 306 31 22 chr13 11214611 11214838 -109069474 + B4A SINE B4 2 230 -62 1 670 412 191 68 7 chr13 11214838 11214986 -109069326 + RMER17A LTR ERVK 296 452 -299 1 670 345 257 0 26 chr13 11214993 11215069 -109069243 + B4A SINE B4 219 292 0 1 670 2077 84 100 7 chr13 11215077 11215376 -109068936 + ORR1A2 LTR MaLR 1 327 0 1 670 283 285 87 65 chr13 11218116 11218300 -109066012 + RMER15 LTR ERVL 388 575 0 1 670 492 101 38 51 chr13 11218974 11219131 -109065181 + CT-rich Low_complexity Low_complexity 5 159 0 1 670 2261 91 164 0 chr13 11219237 11219590 -109064722 + IAPLTR2a LTR ERVK 1 411 0 1 670 436 130 17 138 chr13 11219642 11219758 -109064554 + IAPEz-int LTR ERVK 22 123 -6358 1 670 230 219 0 0 chr13 11219758 11219799 -109064513 + RLTR27 LTR ERVK 231 271 -38 1 670 240 327 0 0 chr13 11219826 11219881 -109064431 + RLTR27 LTR ERVK 221 275 -34 1 670 3256 60 21 16 chr13 11219881 11220448 -109063864 + IAPEz-int LTR ERVK 168 662 -5819 1 670 2472 82 0 3 chr13 11220448 11220791 -109063521 + IAPEz-int LTR ERVK 1359 1700 -4781 1 670 6615 38 4 0 chr13 11220786 11221610 -109062702 + IAPEz-int LTR ERVK 5653 6479 -2 1 670 2232 91 164 0 chr13 11221612 11221965 -109062347 + IAPLTR2a LTR ERVK 1 411 0 1 670 216 216 0 0 chr13 11222251 11222302 -109062010 + T-rich Low_complexity Low_complexity 1 51 0 1 670 2051 287 39 63 chr13 11223127 11224474 -109059838 + MYSERV-int LTR ERVK 3805 5084 -1466 1 670 555 298 57 26 chr13 11224477 11224670 -109059642 + RMER4A LTR ERVK 239 437 -29 1 670 1822 209 93 38 chr13 11224670 11225127 -109059185 + MYSERV-int LTR ERVK 7920 8150 -809 1 670 180 0 0 0 chr13 11225127 11225147 -109059165 + (TATG)n Simple_repeat Simple_repeat 1 20 0 1 670 369 0 0 0 chr13 11225147 11225187 -109059125 + (TAGA)n Simple_repeat Simple_repeat 3 43 0 1 670 1822 171 117 24 chr13 11225187 11225410 -109058902 + MYSERV-int LTR ERVK 8151 8414 -545 1 670 4096 95 11 0 chr13 11225703 11226273 -109058039 + MT2B2 LTR ERVL 1 576 -8 1 670 754 288 31 70 chr13 11226585 11226872 -109057440 + B4 SINE B4 15 290 -2 1 670 33996 49 1 15 chr13 11227233 11232384 -109051928 + L1Md_F LINE L1 512 5586 -297 1 670 8524 29 0 0 chr13 11232384 11233380 -109050932 + L1Md_A LINE L1 5587 6582 0 1 670 33996 39 0 1 chr13 11233380 11233393 -109050919 + L1Md_F LINE L1 5587 5599 -284 1 670 438 282 18 0 chr13 11234013 11234123 -109050189 - PB1D7 SINE Alu -6 114 3 1 670 23 0 0 0 chr13 11234233 11234256 -109050056 + AT_rich Low_complexity Low_complexity 1 23 0 1 670 738 0 0 0 chr13 11234300 11234382 -109049930 + (TTC)n Simple_repeat Simple_repeat 3 84 0 1 670 650 232 177 3 chr13 11235172 11235459 -109048853 + MTE2b LTR MaLR 16 352 -27 1 670 255 319 14 0 chr13 11235786 11235858 -109048454 + CT-rich Low_complexity Low_complexity 2 74 0 1 670 7052 75 20 22 chr13 11236410 11237343 -109046969 + L1_Mus3 LINE L1 5540 6468 -170 1 670 3103 70 12 7 chr13 11237343 11237762 -109046550 - BGLII LTR ERVK 0 421 1 1 670 7052 72 21 23 chr13 11237762 11237928 -109046384 + L1_Mus3 LINE L1 6469 6637 -1 1 670 1179 88 0 0 chr13 11237934 11238082 -109046230 + B1_Mus1 SINE Alu 1 148 0 1 670 207 25 49 24 chr13 11238082 11238123 -109046189 + (CAAAAA)n Simple_repeat Simple_repeat 6 47 0 1 670 717 266 16 3 chr13 11238447 11238711 -109045601 - Lx5 LINE L1 -712 6748 6264 1 670 1165 262 109 0 chr13 11238707 11239028 -109045284 + Lx6 LINE L1 7078 7433 -27 1 670 933 261 31 66 chr13 11239064 11239351 -109044961 + MTEa LTR MaLR 70 346 -33 1 670 588 282 69 23 chr13 11240034 11240208 -109044104 + B3A SINE B2 1 182 -16 1 670 450 155 0 0 chr13 11240208 11240324 -109043988 + (CAGAGA)n Simple_repeat Simple_repeat 1 116 0 1 670 321 133 0 0 chr13 11240416 11240461 -109043851 + HAL1-3A_ME LINE L1 1976 2020 -838 1 670 447 202 24 142 chr13 11240463 11240590 -109043722 + PB1D9 SINE Alu 1 112 -8 1 670 519 60 0 0 chr13 11240596 11240663 -109043649 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 1 670 261 0 0 0 chr13 11241002 11241031 -109043281 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 670 471 198 168 43 chr13 11241261 11241446 -109042866 - B3 SINE B2 -4 212 5 1 670 353 305 11 0 chr13 11241471 11241566 -109042746 - B3 SINE B2 -97 119 24 1 670 271 325 108 19 chr13 11241629 11241786 -109042526 - MIR SINE MIR -25 237 67 1 670 1197 48 0 0 chr13 11241805 11241952 -109042360 + B1_Mm SINE Alu 1 147 0 1 670 288 0 0 0 chr13 11241952 11241984 -109042328 + (A)n Simple_repeat Simple_repeat 1 32 0 1 670 310 311 63 26 chr13 11242226 11242543 -109041769 + Lx7 LINE L1 5599 5929 -371 1 670 22 0 0 0 chr13 11242874 11242896 -109041416 + AT_rich Low_complexity Low_complexity 1 22 0 1 670 716 278 93 8 chr13 11243170 11243406 -109040906 + ORR1D2 LTR MaLR 74 329 -41 1 670 329 351 79 95 chr13 11243392 11243697 -109040615 - MTE2a LTR MaLR -28 351 52 1 670 580 303 38 34 chr13 11243769 11243788 -109040524 - ORR1E LTR MaLR -122 237 218 1 670 378 0 0 0 chr13 11243788 11243830 -109040482 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 670 580 303 38 34 chr13 11243830 11244046 -109040266 - ORR1E LTR MaLR -142 217 1 1 670 275 396 0 10 chr13 11244550 11244647 -109039665 - ID_B1 SINE B4 -43 181 86 1 670 339 371 0 0 chr13 11244562 11244651 -109039661 - PB1D10 SINE Alu -28 89 1 1 670 992 309 65 19 chr13 11245008 11245331 -109038981 + MTE2b LTR MaLR 1 338 -41 1 670 891 267 38 67 chr13 11245358 11245699 -109038613 + ORR1E LTR MaLR 29 359 0 1 670 22 0 0 0 chr13 11245995 11246017 -109038295 + AT_rich Low_complexity Low_complexity 1 22 0 1 670 849 302 93 50 chr13 11246481 11246902 -109037410 + MLT2B1 LTR ERVL 18 456 -64 1 670 486 190 0 0 chr13 11247189 11247310 -109037002 + GA-rich Low_complexity Low_complexity 2 122 0 1 670 441 313 55 48 chr13 11247753 11248025 -109036287 + B4A SINE B4 11 284 -8 1 670 3364 179 17 10 chr13 11248066 11248657 -109035655 + RLTR17 LTR ERVK 98 692 0 1 670 189 0 0 0 chr13 11248780 11248801 -109035511 + (T)n Simple_repeat Simple_repeat 1 21 0 1 670 23102 145 30 12 chr13 11249149 11255110 -109029202 + L1_Mus4 LINE L1 530 6603 -33 1 670 3358 23 10 0 chr13 11255110 11255502 -109028810 + MTA_Mm LTR MaLR 1 396 0 1 670 7044 91 5 6 chr13 11255502 11255530 -109028782 + L1_Mus4 LINE L1 6604 6627 -9 1 670 222 37 0 0 chr13 11255635 11255662 -109028650 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 670 180 0 0 0 chr13 11255663 11255683 -109028629 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2 670 246 241 9 26 chr13 11256830 11256945 -109027367 + (TATATG)n Simple_repeat Simple_repeat 1 113 0 2 670 271 253 40 13 chr13 11257116 11257192 -109027120 - B4 SINE B4 -152 140 63 2 670 413 287 233 50 chr13 11257300 11257601 -109026711 - ORR1D2 LTR MaLR -14 356 1 2 670 2023 135 148 30 chr13 11257886 11258284 -109026028 + RLTR11B LTR ERVK 1 445 -8 2 670 230 81 27 0 chr13 11259003 11259040 -109025272 + (CAT)n Simple_repeat Simple_repeat 1 38 0 2 670 479 273 6 25 chr13 11259072 11259230 -109025082 + HAL1-2a_MD LINE L1 2325 2479 -545 2 670 189 0 0 0 chr13 11260111 11260132 -109024180 + (TTTTTG)n Simple_repeat Simple_repeat 1 21 0 2 670 432 209 22 11 chr13 11261173 11261265 -109023047 - ORR1D2 LTR MaLR -277 93 1 2 670 521 119 10 0 chr13 11261426 11261527 -109022785 + (TC)n Simple_repeat Simple_repeat 1 102 0 2 670 342 98 0 0 chr13 11261527 11261578 -109022734 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 670 639 322 65 65 chr13 11261588 11261808 -109022504 - B4A SINE B4 0 292 73 2 670 2054 81 10 7 chr13 11261808 11262096 -109022216 - L1_Mus1 LINE L1 0 6567 6279 2 670 639 322 65 65 chr13 11262096 11262167 -109022145 - B4A SINE B4 -220 72 2 2 670 604 290 96 33 chr13 11262843 11263114 -109021198 + B4A SINE B4 1 288 -4 2 670 232 216 20 0 chr13 11263117 11263168 -109021144 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 2 670 3961 59 42 8 chr13 11263197 11263724 -109020588 + LTRIS2 LTR ERV1 5 549 -15 2 670 27150 29 1 0 chr13 11263851 11267254 -109017058 + L1Md_T LINE L1 2181 5586 -297 2 670 8388 36 1 0 chr13 11267254 11268249 -109016063 + L1Md_T LINE L1 5587 6582 0 2 670 395 238 10 29 chr13 11268265 11268369 -109015943 - Lx8 LINE L1 -250 7223 7122 2 670 307 313 48 0 chr13 11268565 11268712 -109015600 + L1MA7 LINE L1 5714 5867 -424 2 670 929 316 73 38 chr13 11268716 11269097 -109015215 + MTE2a LTR MaLR 4 375 -4 2 670 184 169 51 13 chr13 11269549 11269627 -109014685 + (CATA)n Simple_repeat Simple_repeat 2 82 0 2 670 302 264 41 35 chr13 11269658 11269880 -109014432 + (CATA)n Simple_repeat Simple_repeat 1 223 0 2 670 889 296 116 61 chr13 11271122 11271517 -109012795 + MT2A LTR ERVL 1 423 -110 2 670 4079 43 20 2 chr13 11271517 11272008 -109012304 - RLTR1C LTR ERV1 -3 500 1 2 670 889 296 116 61 chr13 11272008 11272036 -109012276 + MT2A LTR ERVL 424 447 -86 2 670 333 0 0 0 chr13 11272036 11272073 -109012239 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 670 513 0 0 0 chr13 11272075 11272132 -109012180 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 83 323 284 0 0 chr13 11272164 11272231 -109012081 + URR1B DNA MER1_type 7 73 -152 2 671 928 120 7 7 chr13 11272347 11272498 -109011814 + URR1B DNA MER1_type 75 225 0 2 671 366 233 52 58 chr13 11272359 11272514 -109011798 - CYRA11_Mm Unknown Y-chromosome -306 311 158 2 671 1371 244 38 17 chr13 11272657 11273035 -109011277 - MTD LTR MaLR -27 380 3 2 671 497 243 0 28 chr13 11273197 11273303 -109011009 + B3A SINE B2 39 141 -57 2 671 597 206 29 37 chr13 11273284 11273420 -109010892 + MTD LTR MaLR 270 404 -15 2 671 739 283 51 28 chr13 11274273 11274527 -109009785 - RMER15 LTR ERVL -42 533 274 2 671 566 237 199 74 chr13 11274564 11274875 -109009437 - Lx9 LINE L1 -4 7640 7291 2 671 692 249 17 91 chr13 11275021 11275087 -109009225 + B3 SINE B2 1 61 -155 2 671 180 0 0 0 chr13 11275087 11275107 -109009205 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 671 692 249 17 91 chr13 11275107 11275270 -109009042 + B3 SINE B2 62 213 -3 2 671 676 265 0 0 chr13 11275351 11275483 -109008829 + B1_Mur2 SINE Alu 3 134 -15 2 671 279 0 0 0 chr13 11275486 11275517 -109008795 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 671 509 292 62 62 chr13 11275597 11275671 -109008641 + ORR1E LTR MaLR 1 72 -287 2 671 2019 118 11 75 chr13 11275671 11276019 -109008293 - ORR1A2 LTR MaLR -1 326 1 2 671 509 292 62 62 chr13 11276019 11276152 -109008160 + ORR1E LTR MaLR 73 208 -151 2 671 1112 274 36 56 chr13 11276252 11276648 -109007664 - MTE2a LTR MaLR -14 405 10 2 671 359 240 113 10 chr13 11276645 11276742 -109007570 + ORR1E LTR MaLR 273 379 0 2 671 390 42 0 0 chr13 11277102 11277150 -109007162 + (GGGAGA)n Simple_repeat Simple_repeat 2 49 0 2 671 252 86 0 0 chr13 11278666 11278701 -109005611 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 671 505 246 7 69 chr13 11278705 11278849 -109005463 - B3 SINE B2 -80 136 2 2 671 260 379 21 0 chr13 11278854 11278994 -109005318 - ID_B1 SINE B4 -3 221 79 2 671 223 314 83 0 chr13 11279199 11279320 -109004992 - L3 LINE CR1 -551 3938 3808 2 671 1255 252 76 34 chr13 11279790 11280147 -109004165 + MTEa LTR MaLR 8 379 0 2 671 251 170 64 0 chr13 11280619 11280666 -109003646 + B3 SINE B2 5 54 -162 2 671 378 159 0 0 chr13 11280688 11280776 -109003536 + (CA)n Simple_repeat Simple_repeat 2 89 0 2 671 3543 13 2 0 chr13 11280981 11281376 -109002936 + MTA_Mm LTR MaLR 1 396 0 2 671 9024 33 5 4 chr13 11281376 11282473 -109001839 + MTA_Mm-int LTR MaLR 1 1098 0 2 671 3543 13 2 0 chr13 11282473 11282868 -109001444 + MTA_Mm LTR MaLR 1 396 0 2 671 954 263 14 9 chr13 11282876 11283091 -109001221 + ID_B1 SINE B4 9 224 0 2 671 523 27 27 0 chr13 11283422 11283495 -109000817 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 671 228 250 29 20 chr13 11284130 11284232 -109000080 - L1M3 LINE L1 -1543 4597 4495 2 671 570 29 0 0 chr13 11284441 11284509 -108999803 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 2 671 280 259 0 24 chr13 11284510 11284637 -108999675 + GA-rich Low_complexity Low_complexity 1 124 0 2 671 287 217 0 0 chr13 11285251 11285297 -108999015 + ID4_ SINE ID 26 71 -12 2 671 928 309 18 65 chr13 11285792 11286131 -108998181 - MTE2a LTR MaLR 0 379 57 2 671 252 0 0 0 chr13 11286478 11286506 -108997806 + (GGA)n Simple_repeat Simple_repeat 3 30 0 2 671 1305 83 0 0 chr13 11286506 11286686 -108997626 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 2 671 4415 72 5 2 chr13 11287036 11287677 -108996635 + L1_Mm LINE L1 2819 3461 -2422 2 671 32371 61 6 7 chr13 11287680 11293038 -108991274 + L1Md_F2 LINE L1 234 5585 -298 2 671 7734 54 5 4 chr13 11293039 11294021 -108990291 + L1Md_F2 LINE L1 5587 6569 -13 2 671 267 130 0 0 chr13 11294304 11294358 -108989954 + (TTG)n Simple_repeat Simple_repeat 2 55 0 2 671 497 285 14 85 chr13 11294524 11294735 -108989577 + B3A SINE B2 3 198 0 2 671 283 301 79 31 chr13 11295436 11295563 -108988749 - B1_Mur2 SINE Alu -3 146 14 2 671 407 254 31 55 chr13 11296711 11296853 -108987459 - B3A SINE B2 -35 160 20 2 671 650 235 13 7 chr13 11296841 11296995 -108987317 + ORR1D2 LTR MaLR 205 359 -11 2 671 390 42 0 0 chr13 11297394 11297442 -108986870 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 671 679 245 0 19 chr13 11298803 11298965 -108985347 + RMER30 DNA MER1_type 2 160 -42 2 671 625 260 53 13 chr13 11299042 11299194 -108985118 + RSINE1 SINE B4 8 165 0 2 671 212 282 169 40 chr13 11299070 11299218 -108985094 + B3 SINE B2 39 205 -11 2 671 984 41 0 0 chr13 11299849 11299970 -108984342 + (GGGAA)n Simple_repeat Simple_repeat 5 125 0 2 671 439 270 36 0 chr13 11300318 11300429 -108983883 + B1F SINE Alu 33 147 -2 2 671 256 222 0 0 chr13 11300448 11300493 -108983819 + ID4_ SINE ID 20 64 -19 2 671 226 323 0 75 chr13 11300493 11300515 -108983797 + tRNA-Ala-GCG tRNA tRNA 14 75 0 2 671 877 118 48 0 chr13 11300843 11300992 -108983320 + B2_Mm2 SINE B2 1 169 -47 2 671 621 40 0 0 chr13 11300994 11301070 -108983242 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 2 671 615 229 210 6 chr13 11301440 11301607 -108982705 + B4A SINE B4 1 201 -91 2 671 723 24 0 0 chr13 11301607 11301692 -108982620 + (GAAA)n Simple_repeat Simple_repeat 4 88 0 2 671 1216 269 58 58 chr13 11302289 11302648 -108981664 - ORR1E LTR MaLR 0 359 1 2 671 299 189 74 11 chr13 11302932 11303024 -108981288 + MTE2a LTR MaLR 5 108 -311 2 671 279 241 67 22 chr13 11303008 11303097 -108981215 - B3A SINE B2 -105 93 1 2 671 337 335 54 50 chr13 11303228 11303486 -108980826 - L1M5 LINE L1 -843 5303 5045 2 671 1010 294 67 8 chr13 11303972 11304329 -108979983 + MTE2b LTR MaLR 2 379 0 2 671 363 321 22 30 chr13 11304479 11304614 -108979698 - RSINE1 SINE B4 -19 146 13 2 671 811 236 55 5 chr13 11306199 11306399 -108977913 + B3 SINE B2 1 210 -6 2 671 1094 120 36 0 chr13 11306463 11306630 -108977682 + B2_Mm2 SINE B2 1 173 -22 2 671 234 150 0 0 chr13 11306630 11306670 -108977642 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 671 243 152 22 0 chr13 11306671 11306717 -108977595 + B2_Mm2 SINE B2 123 169 -26 2 671 279 356 98 51 chr13 11306937 11307387 -108976925 - L2 LINE L2 -786 2633 2163 2 671 222 118 0 0 chr13 11307529 11307563 -108976749 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 671 526 304 92 12 chr13 11307656 11307819 -108976493 - B4 SINE B4 -116 176 1 2 671 680 280 126 100 chr13 11307890 11308231 -108976081 + ORR1E LTR MaLR 1 350 -9 2 671 1258 233 63 31 chr13 11308395 11308714 -108975598 - ORR1E LTR MaLR -21 338 10 2 671 317 242 0 0 chr13 11310169 11310235 -108974077 - MLT1D LTR MaLR -428 77 12 2 671 299 287 44 96 chr13 11310302 11310437 -108973875 + RMER15 LTR ERVL 5 132 -443 2 671 278 269 147 15 chr13 11310571 11310707 -108973605 + RMER15 LTR ERVL 422 575 0 2 671 2103 99 56 0 chr13 11310756 11311058 -108973254 - ORR1A2 LTR MaLR -8 319 1 2 671 535 291 15 15 chr13 11312049 11312185 -108972127 + RSINE1 SINE B4 5 140 -25 2 671 365 0 22 0 chr13 11312188 11312233 -108972079 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 671 21 36 0 0 chr13 11312249 11312277 -108972035 + AT_rich Low_complexity Low_complexity 1 28 0 2 671 1923 52 0 0 chr13 11312330 11312578 -108971734 - L1_Mus1 LINE L1 -134 6433 6186 2 671 313 338 21 50 chr13 11312954 11313217 -108971095 + MLT1A0 LTR MaLR 75 385 -5 2 671 492 89 0 0 chr13 11313383 11313462 -108970850 + (GA)n Simple_repeat Simple_repeat 2 80 0 2 671 1778 226 25 25 chr13 11313559 11313967 -108970345 + MTD LTR MaLR 7 414 -5 3 671 243 333 10 70 chr13 11313956 11314056 -108970256 - ID_B1 SINE B4 -29 195 102 3 671 447 35 0 0 chr13 11314133 11314190 -108970122 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 671 387 0 0 0 chr13 11314374 11314417 -108969895 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 671 394 306 41 20 chr13 11314432 11314579 -108969733 - B4A SINE B4 -22 270 121 3 671 4173 86 4 2 chr13 11314699 11315259 -108969053 + L1_Mus2 LINE L1 6006 6566 0 3 671 678 273 12 0 chr13 11315462 11315623 -108968689 + B3A SINE B2 1 163 -35 3 671 29 60 0 0 chr13 11315623 11315673 -108968639 + AT_rich Low_complexity Low_complexity 1 50 0 3 671 762 11 0 0 chr13 11318371 11318458 -108965854 + (TC)n Simple_repeat Simple_repeat 2 88 0 3 671 297 0 0 0 chr13 11318458 11318490 -108965822 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 671 501 273 0 117 chr13 11318880 11319025 -108965287 - RSINE1 SINE B4 -35 130 3 3 671 333 0 0 0 chr13 11319090 11319127 -108965185 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 3 671 240 273 106 126 chr13 11319143 11319294 -108965018 - ORR1E LTR MaLR -44 315 168 3 671 4057 92 27 0 chr13 11319515 11320077 -108964235 - L1_Mus1 LINE L1 0 6567 5991 3 671 3387 48 14 0 chr13 11320081 11320571 -108963741 + L1Md_F2 LINE L1 5532 6028 -554 3 671 402 69 0 0 chr13 11320646 11320704 -108963608 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 671 279 0 0 0 chr13 11320704 11320734 -108963578 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 671 362 206 74 32 chr13 11320775 11320870 -108963442 - MTEa LTR MaLR 0 379 281 3 671 450 262 0 101 chr13 11321011 11321130 -108963182 + ID_B1 SINE B4 81 187 -37 3 671 217 0 61 0 chr13 11321186 11321219 -108963093 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 671 704 307 0 50 chr13 11321603 11321805 -108962507 - B3A SINE B2 -5 193 2 3 671 477 154 0 0 chr13 11322484 11322594 -108961718 + GA-rich Low_complexity Low_complexity 1 110 0 3 671 650 338 60 34 chr13 11322618 11322887 -108961425 - B4A SINE B4 0 292 17 3 671 521 262 78 47 chr13 11323312 11323504 -108960808 - B3A SINE B2 0 198 1 3 671 249 151 0 0 chr13 11324036 11324089 -108960223 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 671 760 316 69 14 chr13 11324093 11324369 -108959943 - B4A SINE B4 -1 291 1 3 671 3685 174 154 105 chr13 11324592 11324725 -108959587 - RLTR25B LTR ERVK 0 1028 895 3 671 453 19 0 0 chr13 11324725 11324779 -108959533 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 671 3685 174 154 105 chr13 11324779 11325625 -108958687 - RLTR25B LTR ERVK -134 894 2 3 671 21 0 0 0 chr13 11325891 11325912 -108958400 + AT_rich Low_complexity Low_complexity 1 21 0 3 671 369 0 0 0 chr13 11326269 11326310 -108958002 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 671 397 244 8 32 chr13 11326608 11326745 -108957567 - MTE2a LTR MaLR -203 204 54 3 671 573 263 17 23 chr13 11327493 11327668 -108956644 + Lx6 LINE L1 7286 7459 -1 3 671 434 256 21 162 chr13 11327930 11328121 -108956191 - RSINE1 SINE B4 0 165 2 3 671 299 85 21 0 chr13 11328256 11328303 -108956009 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 3 671 353 320 13 0 chr13 11328309 11328417 -108955895 - B1F SINE Alu -10 110 1 3 671 788 247 33 0 chr13 11328880 11329030 -108955282 - B3A SINE B2 -43 155 1 3 671 308 138 15 0 chr13 11329184 11329249 -108955063 + (CAAA)n Simple_repeat Simple_repeat 2 67 0 3 671 1840 48 0 0 chr13 11329778 11330009 -108954303 + L1Md_F2 LINE L1 5355 5585 -298 3 671 7615 63 10 6 chr13 11330010 11330990 -108953322 + L1Md_F2 LINE L1 5587 6570 -12 3 671 440 229 0 62 chr13 11331041 11331153 -108953159 + MTE2b LTR MaLR 15 119 -260 3 671 1156 262 70 74 chr13 11331156 11331786 -108952526 + MTEb LTR MaLR 12 379 0 3 671 1133 277 119 17 chr13 11331892 11332237 -108952075 - MTD LTR MaLR -39 380 1 3 671 830 54 31 0 chr13 11332380 11332509 -108951803 + (TAGA)n Simple_repeat Simple_repeat 1 133 0 3 671 704 173 0 0 chr13 11332730 11332840 -108951472 + MTC LTR MaLR 4 113 -308 3 671 380 20 0 20 chr13 11332840 11332890 -108951422 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 3 671 932 79 0 28 chr13 11332896 11333040 -108951272 - L1Md_F2 LINE L1 -2 6580 6441 3 671 3094 79 2 9 chr13 11333040 11333463 -108950849 + L1_Mm LINE L1 1591 2010 -3873 3 671 875 234 21 5 chr13 11333463 11333656 -108950656 + MTC LTR MaLR 108 303 -118 3 671 2220 73 23 3 chr13 11333678 11333980 -108950332 - IAPLTR2b LTR ERVK -19 308 1 3 671 456 281 0 16 chr13 11333980 11334103 -108950209 + MTC LTR MaLR 299 419 -2 3 671 1291 58 6 28 chr13 11334168 11334345 -108949967 - L1Md_F3 LINE L1 -1 6583 6411 3 671 372 22 0 0 chr13 11334372 11334417 -108949895 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 671 378 0 0 0 chr13 11334418 11334460 -108949852 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 671 558 275 60 22 chr13 11335127 11335309 -108949003 - B3A SINE B2 -9 189 1 3 671 924 173 207 0 chr13 11335423 11335602 -108948710 - B3 SINE B2 0 216 1 3 671 1077 284 55 0 chr13 11335627 11335919 -108948393 - Lx8 LINE L1 -135 7338 7031 3 671 301 312 9 0 chr13 11335921 11336033 -108948279 + Tigger1 DNA MER2_type 171 283 -2135 3 671 476 326 20 40 chr13 11336039 11336237 -108948075 + B3A SINE B2 4 197 -1 3 671 4600 25 0 2 chr13 11336271 11336797 -108947515 - L1Md_T LINE L1 -91 5792 5268 3 671 7210 32 0 0 chr13 11336797 11337589 -108946723 + L1Md_T LINE L1 5791 6582 0 3 671 282 339 47 0 chr13 11337738 11337863 -108946449 + Tigger1 DNA MER2_type 494 624 -1794 3 671 535 236 40 119 chr13 11337863 11338065 -108946247 + B3A SINE B2 3 188 -7 3 671 1398 273 121 22 chr13 11338056 11338591 -108945721 + Tigger1 DNA MER2_type 606 1193 -1225 3 671 795 343 64 41 chr13 11338591 11338934 -108945378 - ORR1E LTR MaLR 0 359 9 3 671 182 205 38 13 chr13 11339403 11339482 -108944830 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 3 671 1575 108 77 0 chr13 11339644 11339904 -108944408 + L1_Mur2 LINE L1 4267 4546 -1331 3 671 881 314 79 7 chr13 11340787 11341079 -108943233 - MTE2a LTR MaLR -45 334 22 3 671 10568 168 13 36 chr13 11341390 11342818 -108941494 + L1_Mur2 LINE L1 1904 3299 -2578 3 671 207 0 0 0 chr13 11342818 11342841 -108941471 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 671 10568 168 13 36 chr13 11342841 11343536 -108940776 + L1_Mur2 LINE L1 3300 3976 -1901 3 671 580 309 35 10 chr13 11343778 11343981 -108940331 + MER54A LTR ERVL 694 901 0 3 671 317 304 162 30 chr13 11344237 11344597 -108939715 + RMER20B LTR ERVK 79 478 -38 3 671 5132 149 13 15 chr13 11344660 11345516 -108938796 + L1VL4 LINE L1 58 911 -5391 3 671 5183 85 11 74 chr13 11345512 11346177 -108938135 + MusHAL1 LINE L1 571 1204 -1508 3 671 1200 64 0 0 chr13 11346177 11346317 -108937995 + B1_Mus2 SINE Alu 2 141 -6 3 671 5183 85 11 74 chr13 11346317 11346505 -108937807 + MusHAL1 LINE L1 1205 1370 -1342 3 671 7843 21 16 1 chr13 11346506 11347437 -108936875 + L1Md_A LINE L1 208 1152 -5572 3 671 39414 8 1 1 chr13 11347433 11353422 -108930890 + L1Md_A LINE L1 1 5586 -297 3 671 9543 6 0 0 chr13 11353422 11354418 -108929894 + L1Md_A LINE L1 5587 6582 0 3 671 42121 10 0 0 chr13 11354419 11359903 -108924409 + L1Md_A LINE L1 1111 6576 -6 3 671 790 190 6 11 chr13 11360086 11360267 -108924045 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 671 207 100 0 0 chr13 11360276 11360306 -108924006 + (CAGG)n Simple_repeat Simple_repeat 2 31 0 3 671 1649 196 46 9 chr13 11360358 11360708 -108923604 - Lx9 LINE L1 -146 7498 7136 3 671 1478 163 0 32 chr13 11362224 11362509 -108921803 - Lx2B LINE L1 -921 6079 5804 3 671 3672 221 9 10 chr13 11362506 11363362 -108920950 + Lx2B LINE L1 6100 6974 -2 3 671 620 320 6 39 chr13 11363435 11363614 -108920698 - B3A SINE B2 -24 174 2 3 671 293 157 98 0 chr13 11363647 11363698 -108920614 - tRNA-Cys-TGY tRNA tRNA -14 61 6 3 671 1841 145 139 27 chr13 11363708 11364076 -108920236 - RLTR9E LTR ERVK 0 409 1 3 671 227 281 108 78 chr13 11364179 11364340 -108919972 - Charlie1 DNA MER1_type -128 2653 2488 3 671 299 45 0 22 chr13 11364340 11364386 -108919926 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 3 671 227 281 108 78 chr13 11364386 11364482 -108919830 - Charlie1 DNA MER1_type -294 2487 2388 3 671 723 241 7 0 chr13 11364575 11364712 -108919600 + B3A SINE B2 2 139 -59 3 671 432 0 0 0 chr13 11364724 11364772 -108919540 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 671 248 304 368 30 chr13 11364785 11365123 -108919189 - Charlie1 DNA MER1_type -563 2218 1767 3 671 726 269 25 19 chr13 11365209 11365411 -108918901 + B3A SINE B2 6 215 -1 3 671 846 250 54 5 chr13 11365433 11365618 -108918694 - B3 SINE B2 -15 201 8 3 671 236 268 45 23 chr13 11365658 11365746 -108918566 - Charlie1 DNA MER1_type -1115 1666 1577 3 671 1037 153 48 136 chr13 11365873 11366123 -108918189 + RLTR25B LTR ERVK 1 228 -800 3 671 1833 203 75 15 chr13 11366101 11366598 -108917714 + RLTR25B LTR ERVK 381 1028 0 3 671 616 323 30 50 chr13 11366884 11367083 -108917229 + ID_B1 SINE B4 20 214 -10 3 671 509 0 16 0 chr13 11368340 11368401 -108915911 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 3 671 455 252 218 21 chr13 11368514 11368656 -108915656 - B3A SINE B2 -28 170 1 3 671 409 200 0 0 chr13 11369298 11369368 -108914944 + B3A SINE B2 1 70 -128 3 671 2413 66 75 0 chr13 11369370 11369703 -108914609 + MTB LTR MaLR 1 358 -42 3 671 276 15 27 96 chr13 11369710 11369783 -108914529 + (TTTG)n Simple_repeat Simple_repeat 1 68 0 3 671 1257 48 7 0 chr13 11369783 11369928 -108914384 - B1_Mm SINE Alu -1 146 1 3 671 313 45 68 0 chr13 11369930 11369974 -108914338 + MTB LTR MaLR 346 392 -8 3 671 482 198 23 0 chr13 11371046 11371132 -108913180 - RMER20B LTR ERVK -539 88 1 3 671 383 273 13 13 chr13 11371239 11371391 -108912921 + (TA)n Simple_repeat Simple_repeat 1 152 0 3 671 4255 194 46 59 chr13 11371566 11372482 -108911830 - RMER13B LTR ERVK -4 904 1 3 671 812 236 53 19 chr13 11372679 11372886 -108911426 + B3 SINE B2 3 216 0 3 671 524 279 79 0 chr13 11373218 11373358 -108910954 + RSINE1 SINE B4 2 152 -13 3 671 259 65 43 0 chr13 11373374 11373420 -108910892 + (CAAT)n Simple_repeat Simple_repeat 1 48 0 3 671 2482 93 3 50 chr13 11373587 11373926 -108910386 - ORR1A2 LTR MaLR -4 323 1 3 671 494 296 69 14 chr13 11374980 11375124 -108909188 + RSINE1 SINE B4 4 155 -10 3 671 342 0 0 0 chr13 11375128 11375166 -108909146 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 671 3567 38 5 0 chr13 11375399 11375793 -108908519 + MTA_Mm LTR MaLR 1 396 0 4 671 1508 42 2 0 chr13 11375892 11376442 -108907870 + (GAA)n Simple_repeat Simple_repeat 1 550 0 4 671 561 30 0 0 chr13 11376444 11376511 -108907801 + (GGA)n Simple_repeat Simple_repeat 3 69 0 4 671 1102 44 0 0 chr13 11376972 11377109 -108907203 + B1_Mus1 SINE Alu 11 147 -1 4 671 209 396 21 0 chr13 11377195 11377291 -108907021 - MIR3 SINE MIR -10 198 101 4 671 564 244 0 0 chr13 11377691 11377871 -108906441 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 671 205 195 0 0 chr13 11377873 11377914 -108906398 + (TATATG)n Simple_repeat Simple_repeat 6 46 0 4 671 601 272 18 128 chr13 11377916 11378135 -108906177 - B3A SINE B2 -14 202 8 4 671 468 0 0 0 chr13 11378137 11378189 -108906123 + (TAG)n Simple_repeat Simple_repeat 2 53 0 4 671 482 273 55 98 chr13 11378192 11378375 -108905937 + B4 SINE B4 114 288 -4 4 671 441 0 0 0 chr13 11378882 11378931 -108905381 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 671 26 64 0 0 chr13 11379782 11379829 -108904483 + AT_rich Low_complexity Low_complexity 1 47 0 4 671 275 402 25 0 chr13 11379955 11380077 -108904235 - B3A SINE B2 -26 172 48 4 671 649 177 18 0 chr13 11381609 11381722 -108902590 + B3A SINE B2 1 115 -83 4 671 1219 58 0 0 chr13 11382145 11382284 -108902028 + B1_Mm SINE Alu 1 139 -8 4 671 279 0 0 0 chr13 11382284 11382315 -108901997 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 671 25 31 0 0 chr13 11382830 11382862 -108901450 + AT_rich Low_complexity Low_complexity 1 32 0 4 671 890 257 24 14 chr13 11383016 11383225 -108901087 - B3 SINE B2 -4 212 2 4 671 239 330 106 35 chr13 11383270 11383319 -108900993 - ID_B1 SINE B4 -2 222 102 4 671 267 270 0 16 chr13 11383319 11383383 -108900929 - PB1D10 SINE Alu -34 83 21 4 671 204 40 0 0 chr13 11383694 11383719 -108900593 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 4 671 386 161 0 0 chr13 11383941 11384003 -108900309 + GA-rich Low_complexity Low_complexity 3 64 0 4 671 696 125 0 0 chr13 11384003 11384131 -108900181 + (CAAGG)n Simple_repeat Simple_repeat 3 130 0 4 671 885 263 9 18 chr13 11385180 11385397 -108898915 + ID_B1 SINE B4 1 215 -9 4 671 538 259 26 0 chr13 11385426 11385542 -108898770 + PB1D7 SINE Alu 1 119 -1 4 671 342 248 266 14 chr13 11385758 11385897 -108898415 - ORR1D2 LTR MaLR -1 369 196 4 671 242 222 16 16 chr13 11385920 11385984 -108898328 - MTE2a LTR MaLR -2 377 314 4 671 558 0 0 0 chr13 11386473 11386535 -108897777 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 671 198 0 0 0 chr13 11386535 11386556 -108897756 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 671 245 175 31 16 chr13 11386556 11386620 -108897692 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 4 671 329 291 9 80 chr13 11386635 11386747 -108897565 + B3A SINE B2 88 191 -7 4 671 406 342 0 0 chr13 11386765 11386876 -108897436 + B1F2 SINE Alu 37 147 -2 4 671 579 29 0 0 chr13 11387432 11387501 -108896811 + (TTCC)n Simple_repeat Simple_repeat 2 70 0 4 671 785 289 62 62 chr13 11388041 11388376 -108895936 - MLT1C LTR MaLR -48 419 113 4 671 435 83 0 0 chr13 11388527 11388587 -108895725 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 671 243 0 0 0 chr13 11388594 11388621 -108895691 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4 671 1154 94 6 0 chr13 11388621 11388780 -108895532 - B2_Mm1t SINE B2 -33 160 1 4 671 197 250 0 111 chr13 11388787 11388850 -108895462 - L2b LINE L2 -1 3374 3319 4 671 21608 119 27 6 chr13 11388880 11393186 -108891126 + L1Md_F LINE L1 195 4592 -1291 4 671 835 91 0 0 chr13 11393191 11393301 -108891011 - RLTR9B2 LTR ERVK -3 417 308 4 671 1830 124 58 58 chr13 11393610 11394004 -108890308 + ETnERV2-int LTR ERVK 1365 1758 -5648 4 671 1164 40 7 0 chr13 11394006 11394157 -108890155 - B2_Mm1t SINE B2 -1 192 41 4 671 1459 147 11 4 chr13 11394163 11394423 -108889889 + ETnERV2-int LTR ERVK 1983 2244 -5162 4 671 8440 132 56 5 chr13 11394414 11395771 -108888541 + ETnERV2-int LTR ERVK 2494 3917 -3489 4 671 387 0 0 0 chr13 11395771 11395814 -108888498 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 671 8440 213 58 28 chr13 11395814 11397249 -108887063 + ETnERV2-int LTR ERVK 1660 4081 -3325 4 671 413 56 40 40 chr13 11397461 11397535 -108886777 + ETnERV2-int LTR ERVK 7331 7404 -2 4 671 1958 166 72 8 chr13 11397536 11397912 -108886400 + RLTR9D LTR ERVK 1 400 -3 4 671 6912 99 59 8 chr13 11397912 11399765 -108884547 + L1_Mus1 LINE L1 4588 6567 0 4 671 661 245 53 44 chr13 11400083 11400309 -108884003 - RMER5 LTR ERV1 0 534 307 4 671 298 311 51 68 chr13 11400324 11400559 -108883753 - RMER5 LTR ERV1 -293 241 11 4 671 697 323 33 22 chr13 11401712 11401984 -108882328 + B4 SINE B4 13 287 -5 4 671 219 234 21 0 chr13 11401987 11402034 -108882278 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 671 1023 254 115 3 chr13 11402139 11402479 -108881833 + RCHARR1 DNA MER1_type 130 507 -467 4 671 2631 170 41 12 chr13 11402485 11402973 -108881339 + RMER5 LTR ERV1 1 502 -32 4 83 996 262 32 44 chr13 11402996 11403339 -108880973 + RCHARR1 DNA MER1_type 521 859 -115 4 672 513 0 0 0 chr13 11403341 11403398 -108880914 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 4 672 606 51 0 0 chr13 11404105 11404183 -108880129 + (TTCC)n Simple_repeat Simple_repeat 2 79 0 4 672 2156 162 123 28 chr13 11404375 11404838 -108879474 - LTRIS4 LTR ERV1 0 507 1 4 672 423 0 0 0 chr13 11404950 11404997 -108879315 + (TAGG)n Simple_repeat Simple_repeat 1 47 0 4 672 456 116 0 0 chr13 11405636 11405722 -108878590 + (T)n Simple_repeat Simple_repeat 1 86 0 4 672 639 264 47 35 chr13 11406413 11406582 -108877730 - B3 SINE B2 -21 195 25 4 672 22 0 0 0 chr13 11406881 11406903 -108877409 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 249 325 13 13 chr13 11407896 11407974 -108876338 + ID4_ SINE ID 3 80 -3 4 672 469 263 10 0 chr13 11408099 11408198 -108876114 - B3 SINE B2 -5 211 112 4 672 22 0 0 0 chr13 11408238 11408260 -108876052 + AT_rich Low_complexity Low_complexity 1 22 0 4 672 713 315 0 34 chr13 11408354 11408558 -108875754 + B3A SINE B2 1 197 -1 4 672 187 188 62 0 chr13 11408601 11408649 -108875663 + L2a LINE L2 3305 3355 -71 4 672 387 121 132 41 chr13 11409591 11409712 -108874600 + L1_Mus3 LINE L1 6501 6632 -6 4 672 432 0 0 0 chr13 11409729 11409777 -108874535 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 672 1042 83 0 0 chr13 11409843 11409975 -108874337 + B1_Mus1 SINE Alu 5 136 -12 4 672 591 15 0 0 chr13 11409976 11410044 -108874268 + (GA)n Simple_repeat Simple_repeat 2 69 0 4 672 594 333 143 13 chr13 11410067 11410374 -108873938 + MLT1A0 LTR MaLR 10 356 -9 4 672 630 280 56 40 chr13 11410581 11410784 -108873528 - MTE2a LTR MaLR 0 379 172 4 672 774 75 0 0 chr13 11410784 11410890 -108873422 + (TTTTC)n Simple_repeat Simple_repeat 1 106 0 4 672 630 280 56 40 chr13 11410890 11410935 -108873377 - MTE2a LTR MaLR -208 171 127 4 672 243 0 0 0 chr13 11410955 11410982 -108873330 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 672 646 192 6 6 chr13 11410982 11411139 -108873173 + (TA)n Simple_repeat Simple_repeat 1 157 0 4 672 231 36 0 0 chr13 11411139 11411167 -108873145 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 672 390 125 0 0 chr13 11411459 11411539 -108872773 + (T)n Simple_repeat Simple_repeat 1 80 0 4 672 310 217 17 0 chr13 11412118 11412178 -108872134 + RSINE1 SINE B4 2 62 -103 4 672 180 0 0 0 chr13 11412178 11412198 -108872114 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 672 992 147 11 0 chr13 11412209 11412386 -108871926 + GA-rich Low_complexity Low_complexity 2 180 0 4 672 660 230 0 8 chr13 11412498 11412625 -108871687 + B3A SINE B2 2 127 -71 4 672 2489 75 32 6 chr13 11413060 11413406 -108870906 - L1_Mus3 LINE L1 -2 6636 6282 4 672 579 213 266 19 chr13 11413406 11413564 -108870748 - B3A SINE B2 0 198 2 4 672 302 283 123 7 chr13 11413714 11413860 -108870452 - RSINE1 SINE B4 -1 164 2 4 672 26 82 0 0 chr13 11413889 11413950 -108870362 + AT_rich Low_complexity Low_complexity 1 61 0 4 672 958 194 44 10 chr13 11414345 11414548 -108869764 + B3 SINE B2 5 214 -2 4 672 661 256 36 0 chr13 11414850 11414987 -108869325 + RSINE1 SINE B4 3 144 -21 4 672 271 355 10 57 chr13 11414987 11415044 -108869268 + B2_Mm1a SINE B2 2 186 -7 4 672 493 294 145 88 chr13 11415810 11416127 -108868185 + MLT1A0 LTR MaLR 23 357 -8 4 672 344 258 21 11 chr13 11416144 11416238 -108868074 - ORR1E LTR MaLR -6 353 259 4 672 678 249 75 32 chr13 11416256 11416443 -108867869 - ORR1E LTR MaLR -160 199 5 4 672 274 221 74 120 chr13 11416503 11416519 -108867793 - PB1 SINE Alu 0 127 114 4 672 1549 179 44 53 chr13 11416519 11416708 -108867604 + RMER17C LTR ERVK 1 179 -231 4 672 637 45 11 11 chr13 11416708 11416798 -108867514 + (TCTCC)n Simple_repeat Simple_repeat 3 92 0 4 672 1549 179 44 53 chr13 11416798 11417020 -108867292 + RMER17C LTR ERVK 180 407 -3 4 672 274 221 74 120 chr13 11417020 11417111 -108867201 - PB1 SINE Alu -14 113 25 4 672 476 274 183 0 chr13 11417022 11417197 -108867115 - ID_B1 SINE B4 -12 212 6 4 672 1018 276 110 97 chr13 11417573 11418035 -108866277 - MT2A LTR ERVL 0 533 66 4 672 234 341 23 12 chr13 11418051 11418137 -108866175 - MTE2b LTR MaLR -292 87 1 4 672 855 295 162 3 chr13 11418337 11418657 -108865655 + MTEa LTR MaLR 1 371 -8 4 672 279 336 57 40 chr13 11418839 11418963 -108865349 - LTR84b LTR ERVL -559 202 77 4 672 757 307 5 0 chr13 11419111 11419300 -108865012 - ID_B1 SINE B4 -34 190 1 4 672 257 347 72 77 chr13 11419585 11419766 -108864546 - Tigger5 DNA MER2_type -2207 199 20 4 672 646 310 0 31 chr13 11419982 11420145 -108864167 + RSINE1 SINE B4 6 163 -2 4 672 23 54 0 0 chr13 11421858 11421895 -108862417 + AT_rich Low_complexity Low_complexity 1 37 0 4 672 931 267 73 60 chr13 11421935 11422333 -108861979 - MTE2a LTR MaLR 0 419 8 4 672 469 337 34 0 chr13 11422337 11422512 -108861800 + B3A SINE B2 1 181 -17 4 672 25 31 0 0 chr13 11422518 11422550 -108861762 + AT_rich Low_complexity Low_complexity 1 32 0 5 672 756 278 36 23 chr13 11422958 11423179 -108861133 + MLT2B1 LTR ERVL 10 233 -287 5 672 669 254 108 30 chr13 11423617 11423820 -108860492 + ID_B1 SINE B4 2 220 -4 5 672 309 306 20 0 chr13 11423838 11423936 -108860376 + MLT2B1 LTR ERVL 456 555 -7 5 672 364 276 79 31 chr13 11423996 11424123 -108860189 + RSINE1 SINE B4 4 136 -29 5 672 487 271 58 175 chr13 11424899 11425208 -108859104 - B4 SINE B4 -18 274 2 5 672 497 200 58 19 chr13 11425316 11425443 -108858869 - B3A SINE B2 -46 170 39 5 672 21 0 0 0 chr13 11426089 11426110 -108858202 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 306 50 0 0 chr13 11426485 11426525 -108857787 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 672 466 287 111 48 chr13 11426564 11426835 -108857477 - B4A SINE B4 0 292 5 5 672 1144 250 55 11 chr13 11427047 11427322 -108856990 - B4 SINE B4 -4 288 2 5 672 385 323 15 8 chr13 11428175 11428309 -108856003 + C-rich Low_complexity Low_complexity 1 135 0 5 672 320 282 133 58 chr13 11428383 11428556 -108855756 + MER21B LTR ERV1 467 652 -211 5 672 431 18 0 18 chr13 11428614 11428671 -108855641 + (GA)n Simple_repeat Simple_repeat 2 57 0 5 672 374 247 0 39 chr13 11429894 11430075 -108854237 + (TATG)n Simple_repeat Simple_repeat 3 176 0 5 672 463 211 21 10 chr13 11431720 11431816 -108852496 + RMER5 LTR ERV1 413 509 -25 5 672 228 271 23 34 chr13 11431828 11431916 -108852396 - RMER5 LTR ERV1 -416 118 32 5 672 1034 195 82 0 chr13 11431920 11432115 -108852197 - URR1A DNA MER1_type -15 211 1 5 672 593 300 187 24 chr13 11432199 11432616 -108851696 - RMER5 LTR ERV1 -2 532 48 5 672 549 0 0 0 chr13 11432789 11432850 -108851462 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 5 672 515 269 0 9 chr13 11432850 11432959 -108851353 - PB1D10 SINE Alu -8 109 2 5 672 759 307 50 18 chr13 11433646 11433925 -108850387 - B4 SINE B4 -4 288 1 5 672 414 217 28 229 chr13 11434027 11434206 -108850106 - B1_Mur1 SINE Alu -3 146 4 5 672 2509 186 18 33 chr13 11435767 11436313 -108847999 + Lx5 LINE L1 6478 7015 -35 5 672 271 223 19 0 chr13 11436319 11436422 -108847890 + Lx5 LINE L1 6943 7047 -3 5 672 777 250 23 42 chr13 11436441 11436658 -108847654 + B3 SINE B2 2 214 -2 5 672 280 226 83 0 chr13 11437128 11437212 -108847100 - MLT1A1 LTR MaLR -16 392 302 5 672 295 177 16 5 chr13 11437246 11437308 -108847004 - B1F2 SINE Alu -58 62 3 5 672 284 0 0 27 chr13 11437496 11437533 -108846779 + (TTG)n Simple_repeat Simple_repeat 3 38 0 5 672 569 339 74 23 chr13 11437588 11437798 -108846514 + B4A SINE B4 9 231 -61 5 672 364 314 23 0 chr13 11437798 11437884 -108846428 + PB1D9 SINE Alu 1 88 -32 5 672 405 95 0 0 chr13 11437979 11438042 -108846270 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 672 353 282 0 0 chr13 11438502 11438587 -108845725 + PB1D10 SINE Alu 33 117 0 5 672 411 274 0 135 chr13 11438989 11439145 -108845167 + B1_Mur1 SINE Alu 2 136 -13 5 672 531 0 0 0 chr13 11439304 11439363 -108844949 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 672 768 220 31 0 chr13 11439364 11439523 -108844789 - ORR1D1 LTR MaLR -210 164 1 5 672 334 297 29 30 chr13 11439633 11439806 -108844506 + MIR SINE MIR 57 224 -38 5 672 834 252 28 46 chr13 11439868 11440084 -108844228 - B3A SINE B2 0 216 5 5 672 641 283 56 95 chr13 11440077 11440382 -108843930 + ORR1E LTR MaLR 56 348 -11 5 672 336 336 14 55 chr13 11440752 11440897 -108843415 - MLT1A1 LTR MaLR -7 401 263 5 672 810 275 10 39 chr13 11440973 11441181 -108843131 + B3 SINE B2 9 210 -6 5 672 441 0 0 0 chr13 11442597 11442646 -108841666 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 672 649 300 0 0 chr13 11442659 11442809 -108841503 - B3A SINE B2 -46 152 3 5 672 186 189 0 0 chr13 11444476 11444513 -108839799 + (CATATA)n Simple_repeat Simple_repeat 3 39 0 5 672 370 271 0 18 chr13 11444516 11444685 -108839627 + (TATATG)n Simple_repeat Simple_repeat 6 171 0 5 672 349 324 0 28 chr13 11444709 11444890 -108839422 + (TATG)n Simple_repeat Simple_repeat 3 178 0 5 672 528 292 65 75 chr13 11444898 11445190 -108839122 - B4A SINE B4 0 292 4 5 672 238 260 12 94 chr13 11445630 11445715 -108838597 + MLT1A1 LTR MaLR 319 396 -12 5 672 726 96 0 0 chr13 11445925 11446029 -108838283 + (TG)n Simple_repeat Simple_repeat 2 105 0 5 672 247 300 39 29 chr13 11446041 11446144 -108838168 + YREP_Mm Unknown Unknown 203 306 -1506 5 672 767 56 0 0 chr13 11446497 11446605 -108837707 - L1_Mus1 LINE L1 -1 6566 6459 5 672 2525 68 6 3 chr13 11446708 11447046 -108837266 + L1Md_F2 LINE L1 6244 6582 0 5 672 402 21 0 0 chr13 11447159 11447206 -108837106 + (TAA)n Simple_repeat Simple_repeat 2 48 0 5 672 204 40 0 0 chr13 11447238 11447263 -108837049 + (GTTTG)n Simple_repeat Simple_repeat 4 28 0 5 672 204 40 0 0 chr13 11447263 11447287 -108837025 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 672 639 205 79 0 chr13 11447287 11447414 -108836898 - B1_Mur1 SINE Alu -11 138 2 5 672 973 139 7 0 chr13 11447680 11447824 -108836488 - B1_Mus2 SINE Alu 0 147 3 5 672 511 280 18 71 chr13 11448474 11448631 -108835681 - MTEb LTR MaLR -125 254 107 5 672 243 275 61 24 chr13 11448631 11448713 -108835599 - ORR1D2 LTR MaLR -1 369 285 5 672 670 339 51 30 chr13 11448700 11448937 -108835375 + B4A SINE B4 51 292 0 5 672 995 257 48 23 chr13 11449119 11449513 -108834799 + L1MB8 LINE L1 5644 6047 -131 5 672 270 0 0 0 chr13 11449917 11449947 -108834365 + (TATG)n Simple_repeat Simple_repeat 3 32 0 5 672 4835 118 70 37 chr13 11449976 11450842 -108833470 - RMER17A2 LTR ERVK -11 895 1 5 672 456 19 0 0 chr13 11450850 11450903 -108833409 + (TATG)n Simple_repeat Simple_repeat 2 54 0 5 672 740 160 282 0 chr13 11450906 11451062 -108833250 - B3 SINE B2 -14 202 3 5 672 724 184 36 29 chr13 11451119 11451259 -108833053 + B1_Mur3 SINE Alu 3 143 -6 5 672 233 297 27 0 chr13 11451318 11451429 -108832883 + L1MB8 LINE L1 6063 6176 -2 5 672 196 444 39 8 chr13 11451504 11451738 -108832574 + L2 LINE L2 320 560 -2859 5 672 24 53 0 0 chr13 11451742 11451780 -108832532 + AT_rich Low_complexity Low_complexity 1 38 0 5 672 420 425 29 16 chr13 11452567 11452811 -108831501 - MER115 DNA Tip100 -430 263 17 5 672 1183 265 24 34 chr13 11453726 11454105 -108830207 + MTEb LTR MaLR 5 379 0 5 672 455 272 76 56 chr13 11454203 11454347 -108829965 + RSINE1 SINE B4 2 148 -17 5 672 297 0 0 0 chr13 11454350 11454383 -108829929 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 672 229 279 25 0 chr13 11454543 11454622 -108829690 + L1MC4a LINE L1 5952 6032 -1850 5 672 341 318 38 105 chr13 11454796 11455109 -108829203 + L1MC4a LINE L1 6265 6556 -1326 5 672 728 262 30 10 chr13 11455227 11455424 -108828888 + B3 SINE B2 1 201 -15 5 672 422 284 51 28 chr13 11455461 11455675 -108828637 + L1MC4a LINE L1 7330 7548 -334 5 672 608 316 49 42 chr13 11455681 11455968 -108828344 + B4A SINE B4 2 290 -2 5 672 234 136 0 0 chr13 11455969 11456013 -108828299 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 672 862 260 40 105 chr13 11457088 11457488 -108826824 + MTE2a LTR MaLR 3 376 -3 5 672 278 246 76 15 chr13 11458157 11458223 -108826089 + RSINE1 SINE B4 3 72 -93 5 672 186 71 0 0 chr13 11458389 11458417 -108825895 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 5 672 405 0 0 0 chr13 11458455 11458500 -108825812 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 672 1049 96 132 0 chr13 11458827 11458993 -108825319 - B2_Mm2 SINE B2 -7 188 1 5 672 21 36 0 0 chr13 11459493 11459521 -108824791 + AT_rich Low_complexity Low_complexity 1 28 0 5 672 371 203 17 0 chr13 11460100 11460218 -108824094 + CT-rich Low_complexity Low_complexity 5 124 0 5 672 468 0 0 0 chr13 11460232 11460284 -108824028 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 672 929 331 25 0 chr13 11460298 11460576 -108823736 - B4 SINE B4 -6 286 2 5 672 1122 267 63 25 chr13 11461550 11461915 -108822397 + MTE2a LTR MaLR 1 379 0 5 672 279 0 0 0 chr13 11462308 11462339 -108821973 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 672 862 277 35 0 chr13 11462438 11462640 -108821672 - ID_B1 SINE B4 -8 216 8 5 672 1124 261 90 19 chr13 11462651 11462963 -108821349 - MTD LTR MaLR -12 407 74 5 672 1245 139 44 40 chr13 11462988 11463213 -108821099 + URR1A DNA MER1_type 1 226 0 5 672 30 0 0 0 chr13 11463580 11463610 -108820702 + AT_rich Low_complexity Low_complexity 1 30 0 5 672 380 396 0 19 chr13 11463738 11463900 -108820412 + RSINE1 SINE B4 3 161 -4 5 672 1609 161 17 7 chr13 11463901 11464189 -108820123 + ORR1A4 LTR MaLR 1 291 -38 5 672 195 42 0 0 chr13 11464189 11464213 -108820099 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 672 441 0 0 0 chr13 11464213 11464261 -108820051 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 5 672 2309 173 2 18 chr13 11464779 11465214 -108819098 + RMER16-int LTR ERVK 1143 1570 -3836 5 672 446 261 0 0 chr13 11465213 11465324 -108818988 + ETnERV2-int LTR ERVK 1067 1177 -2137 5 672 438 259 7 71 chr13 11465399 11465540 -108818772 + RLTR45-int LTR ERVK 3279 3410 -3834 5 672 1106 58 0 21 chr13 11465568 11465708 -108818604 + B1_Mm SINE Alu 2 138 -9 5 672 185 0 0 39 chr13 11465727 11465753 -108818559 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 5 672 574 232 20 70 chr13 11465753 11465952 -108818360 + ETnERV2-int LTR ERVK 2378 2566 -4840 5 672 382 246 99 50 chr13 11465976 11466198 -108818114 + SRV_MM-int LTR ERVK 2165 2397 -3770 5 672 597 174 108 7 chr13 11466261 11466400 -108817912 + RMER16-int LTR ERVK 1566 1718 -3688 6 672 1672 107 11 0 chr13 11466380 11466642 -108817670 + RMER16-int LTR ERVK 3055 3319 -2087 6 672 4944 123 46 15 chr13 11466638 11467521 -108816791 + RMER16-int LTR ERVK 3428 4338 -1068 6 672 480 312 29 25 chr13 11467511 11467790 -108816522 + RLTR6-int LTR ERV1 7382 7661 -117 6 672 3004 151 4 21 chr13 11467862 11468523 -108815789 + L1VL4 LINE L1 395 1044 -2515 6 672 516 136 0 0 chr13 11468510 11468598 -108815714 - MusHAL1 LINE L1 -1527 1185 1098 6 672 8554 164 8 191 chr13 11468595 11469958 -108814354 + L1_Mur2 LINE L1 2361 3653 -2224 6 672 1590 206 25 87 chr13 11469958 11470361 -108813951 + RLTR1B LTR ERV1 135 512 0 6 672 8554 164 8 191 chr13 11470361 11471343 -108812969 + L1_Mur2 LINE L1 3654 4587 -1290 6 672 1089 88 0 13 chr13 11471343 11471492 -108812820 - B1_Mus1 SINE Alu 0 148 2 6 672 8554 164 8 191 chr13 11471492 11471646 -108812666 + L1_Mur2 LINE L1 4588 4730 -1147 6 672 31683 74 1 16 chr13 11471672 11476851 -108807461 + L1Md_F LINE L1 484 5586 -297 6 672 7983 42 12 0 chr13 11476851 11477824 -108806488 + L1Md_F2 LINE L1 5587 6571 -11 6 672 396 59 0 0 chr13 11477845 11477896 -108806416 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 6 672 7121 131 11 4 chr13 11477900 11479777 -108804535 + L1_Mus4 LINE L1 4737 6632 -4 6 672 1219 246 102 33 chr13 11479800 11480132 -108804180 - MTE2b LTR MaLR -7 372 18 6 672 3515 75 28 2 chr13 11480770 11481238 -108803074 + RLTR45 LTR ERVK 2 481 -1 6 672 508 297 125 0 chr13 11482196 11482388 -108801924 + B3 SINE B2 1 216 0 6 672 265 82 41 0 chr13 11482407 11482456 -108801856 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 672 1619 196 12 21 chr13 11482609 11482937 -108801375 - RMER5 LTR ERV1 0 534 210 6 672 572 203 32 0 chr13 11483895 11484018 -108800294 + ORR1D-int LTR MaLR 529 655 -715 6 672 710 277 19 0 chr13 11484985 11485144 -108799168 - B3A SINE B2 -36 162 1 6 672 225 0 0 0 chr13 11485254 11485279 -108799033 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 672 245 304 107 10 chr13 11485280 11485383 -108798929 - PB1 SINE Alu -12 115 3 6 672 260 111 22 0 chr13 11485471 11485516 -108798796 + (TTTC)n Simple_repeat Simple_repeat 2 47 0 6 672 3546 202 25 98 chr13 11485718 11486575 -108797737 - ORR1D1-int LTR MaLR -576 794 1 6 672 670 138 89 0 chr13 11486573 11486696 -108797616 - ORR1D1 LTR MaLR -2 372 239 6 672 344 281 92 2 chr13 11486747 11486869 -108797443 + MTEb LTR MaLR 41 170 -209 6 672 618 300 24 59 chr13 11487239 11487409 -108796903 + RSINE1 SINE B4 2 165 0 6 672 25 0 0 0 chr13 11487409 11487434 -108796878 + AT_rich Low_complexity Low_complexity 1 25 0 6 672 305 302 68 36 chr13 11487720 11488058 -108796254 - L1M2c LINE L1 -4601 2188 1668 6 672 1056 93 0 0 chr13 11488058 11488208 -108796104 + (TTTC)n Simple_repeat Simple_repeat 2 151 0 6 672 305 310 67 49 chr13 11488208 11488338 -108795974 - L1M2c LINE L1 -4932 1857 1731 6 672 895 54 61 23 chr13 11488386 11488398 -108795914 - B1_Mus1 SINE Alu 0 148 139 6 672 216 0 0 0 chr13 11488398 11488422 -108795890 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 672 895 54 61 23 chr13 11488422 11488541 -108795771 - B1_Mus1 SINE Alu -10 138 12 6 672 1625 167 76 20 chr13 11488799 11489142 -108795170 - RLTR12A LTR ERVK 0 568 207 6 672 451 288 62 48 chr13 11489224 11489370 -108794942 - B3A SINE B2 -1 197 50 6 672 284 332 75 20 chr13 11489466 11489718 -108794594 - L1M5 LINE L1 -1599 4547 4282 6 672 262 280 60 70 chr13 11489770 11489870 -108794442 + MLT1D LTR MaLR 12 110 -395 6 672 495 294 138 0 chr13 11490157 11490317 -108793995 + ID_B1 SINE B4 6 187 -37 6 672 944 236 119 4 chr13 11490373 11490599 -108793713 + ORR1D2 LTR MaLR 1 252 -118 6 672 786 71 2 1 chr13 11490603 11490719 -108793593 + B1_Mus1 SINE Alu 1 117 -32 6 672 579 213 28 0 chr13 11490701 11490809 -108793503 + ORR1D2 LTR MaLR 255 365 -5 6 672 369 0 0 0 chr13 11490809 11490850 -108793462 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 672 393 273 144 20 chr13 11490875 11491028 -108793284 - L1MC LINE L1 -1907 4239 4068 6 672 36 0 0 0 chr13 11491122 11491158 -108793154 + AT_rich Low_complexity Low_complexity 1 36 0 6 672 331 333 87 27 chr13 11491195 11491414 -108792898 - L1M5 LINE L1 -2190 3956 3725 6 672 576 257 74 98 chr13 11491418 11491458 -108792854 + B3A SINE B2 1 40 -158 6 672 1148 81 0 0 chr13 11491458 11491606 -108792706 + B1_Mus1 SINE Alu 1 148 0 6 672 243 0 0 0 chr13 11491608 11491635 -108792677 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 672 576 257 74 98 chr13 11491635 11491794 -108792518 + B3A SINE B2 41 198 0 6 672 335 324 54 5 chr13 11491811 11492016 -108792296 - L1M5 LINE L1 -2414 3732 3518 6 672 997 329 103 12 chr13 11492056 11492628 -108791684 - Lx7 LINE L1 -5 7468 6819 6 672 1211 30 24 0 chr13 11492628 11492796 -108791516 + (TAGA)n Simple_repeat Simple_repeat 4 175 0 6 672 997 342 96 36 chr13 11492796 11493134 -108791178 - Lx7 LINE L1 -878 6818 6463 6 672 280 320 0 0 chr13 11494489 11494564 -108789748 - ID4_ SINE ID -8 75 1 6 672 688 155 0 12 chr13 11494810 11494973 -108789339 + CT-rich Low_complexity Low_complexity 2 162 0 6 672 261 302 113 2 chr13 11494985 11495085 -108789227 - B1F SINE Alu -10 107 1 6 672 876 10 0 0 chr13 11496146 11496247 -108788065 + (TTC)n Simple_repeat Simple_repeat 3 103 0 6 672 347 261 7 0 chr13 11496316 11496474 -108787838 + CT-rich Low_complexity Low_complexity 1 159 0 6 672 561 350 6 12 chr13 11497456 11497621 -108786691 + RSINE1 SINE B4 1 164 -1 6 672 221 222 40 20 chr13 11498601 11498702 -108785610 + (TA)n Simple_repeat Simple_repeat 1 103 0 6 672 471 298 20 54 chr13 11499529 11499678 -108784634 + B3A SINE B2 6 149 -49 6 672 285 296 0 12 chr13 11499679 11499761 -108784551 + CT-rich Low_complexity Low_complexity 3 83 0 6 672 450 53 0 0 chr13 11499761 11499818 -108784494 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 672 259 0 0 0 chr13 11499965 11500000 -108784312 - B1_Mur4 SINE Alu 0 150 116 6 672 730 81 0 0 chr13 11500000 11500099 -108784213 - B1_Mus1 SINE Alu -35 113 15 1 672 416 178 25 101 chr13 11500099 11500119 -108784193 - MT2B LTR ERVL -337 264 155 2 672 564 243 60 37 chr13 11500940 11501158 -108783154 + L1MC4a LINE L1 7460 7682 -200 3 672 800 147 277 0 chr13 11501756 11501933 -108782379 - URR1A DNA MER1_type 0 226 1 4 672 228 314 21 85 chr13 11502121 11502215 -108782097 + PB1 SINE Alu 11 98 -29 5 672 352 288 0 0 chr13 11502242 11502315 -108781997 + ID4 SINE ID 2 74 -9 6 672 325 309 0 0 chr13 11503127 11503208 -108781104 - B4A SINE B4 -209 83 3 7 672 597 245 65 13 chr13 11503284 11503437 -108780875 + B3A SINE B2 2 162 -36 8 672 324 0 0 0 chr13 11503471 11503507 -108780805 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 672 27 29 0 0 chr13 11503507 11503541 -108780771 + AT_rich Low_complexity Low_complexity 1 34 0 1 672 437 308 82 64 chr13 11503602 11503869 -108780443 - B4 SINE B4 -16 276 5 1 672 333 0 0 0 chr13 11504095 11504132 -108780180 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 672 2042 73 11 113 chr13 11504713 11505068 -108779244 - ORR1A2 LTR MaLR -8 319 1 1 672 592 269 64 8 chr13 11505068 11505246 -108779066 + B3A SINE B2 12 198 -18 1 672 240 111 0 0 chr13 11505251 11505287 -108779025 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 672 620 340 0 0 chr13 11505351 11505510 -108778802 + RSINE1 SINE B4 1 159 -6 1 672 234 150 0 0 chr13 11505513 11505553 -108778759 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1 672 530 322 12 56 chr13 11506450 11506611 -108777701 - B4A SINE B4 -137 155 2 1 672 3470 108 121 0 chr13 11506803 11507322 -108776990 + MT2B2 LTR ERVL 1 582 -2 1 672 699 318 91 10 chr13 11507589 11508096 -108776216 + L1MB3 LINE L1 5574 6129 -54 2 672 481 221 33 58 chr13 11508107 11508227 -108776085 + RSINE1 SINE B4 2 118 -47 2 672 645 105 0 0 chr13 11508239 11508334 -108775978 + (CA)n Simple_repeat Simple_repeat 2 96 0 2 672 184 327 65 28 chr13 11509145 11509252 -108775060 - L2a LINE L2 -14 3412 3302 2 672 232 240 39 26 chr13 11509883 11509960 -108774352 + ID4_ SINE ID 5 82 -1 2 672 6856 132 35 35 chr13 11509976 11510150 -108774162 + MERVL_2A-int LTR ERVL 4508 4683 -1078 2 672 2228 113 69 23 chr13 11510150 11510541 -108773771 + RLTR9E LTR ERVK 1 409 0 2 672 6856 132 35 35 chr13 11510541 11511485 -108772827 + MERVL_2A-int LTR ERVL 4684 5626 -135 2 672 235 284 0 39 chr13 11511487 11511564 -108772748 + ORR1A3-int LTR MaLR 567 640 -1323 2 672 2233 195 131 28 chr13 11511601 11511787 -108772525 + MT2B LTR ERVL 1 228 -373 2 672 966 128 83 6 chr13 11511787 11511968 -108772344 - B2_Mm2 SINE B2 0 195 1 2 672 2233 195 131 28 chr13 11511968 11512325 -108771987 + MT2B LTR ERVL 229 600 -1 2 672 250 263 162 0 chr13 11512328 11512427 -108771885 + ID_B1 SINE B4 105 219 -5 3 672 2157 246 53 74 chr13 11512889 11514053 -108770259 - RMER1B Other Other -2 1064 1 3 672 640 173 184 6 chr13 11514054 11514217 -108770095 + RLTR12B LTR ERVK 1 192 -336 3 672 1281 89 22 0 chr13 11514218 11514397 -108769915 + B2_Mm2 SINE B2 2 184 -11 3 672 4286 197 21 47 chr13 11515288 11516220 -108768092 + RMER13B LTR ERVK 1 908 0 3 672 1171 184 59 35 chr13 11518153 11518440 -108765872 + RLTR12B LTR ERVK 235 528 0 3 672 1200 233 84 0 chr13 11518440 11518689 -108765623 - RMER1B Other Other -752 314 45 3 672 225 211 17 17 chr13 11519391 11519449 -108764863 + MLT1A1 LTR MaLR 71 128 -280 3 672 230 0 33 0 chr13 11519519 11519549 -108764763 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 672 933 111 0 0 chr13 11519549 11519720 -108764592 + (GA)n Simple_repeat Simple_repeat 2 173 0 3 672 11006 69 2 6 chr13 11519905 11521986 -108762326 - L1Md_F2 LINE L1 0 6582 4507 3 672 940 119 10 26 chr13 11522043 11522211 -108762101 + B2_Mm1a SINE B2 25 187 -6 3 672 350 358 9 0 chr13 11522246 11522355 -108761957 + RSINE1 SINE B4 1 110 -55 4 672 513 213 36 18 chr13 11522555 11522665 -108761647 + PB1 SINE Alu 9 120 -7 4 672 267 273 30 0 chr13 11522667 11522733 -108761579 + ID4_ SINE ID 2 69 -14 4 672 190 183 50 0 chr13 11522954 11523014 -108761298 + (CATA)n Simple_repeat Simple_repeat 4 66 0 4 672 203 213 16 32 chr13 11523015 11523078 -108761234 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 672 295 271 72 36 chr13 11523852 11523990 -108760322 - RMER15 LTR ERVL -17 558 416 4 672 306 0 0 0 chr13 11524408 11524442 -108759870 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 4 672 402 57 0 0 chr13 11524630 11524683 -108759629 + (CATA)n Simple_repeat Simple_repeat 1 53 0 4 672 343 359 51 0 chr13 11524708 11524864 -108759448 - LTR16A1 LTR ERVL -3 453 290 4 672 385 302 110 11 chr13 11524864 11525055 -108759257 + B3 SINE B2 2 211 -5 4 672 255 269 121 9 chr13 11525249 11525365 -108758947 - MER5B DNA MER1_type -27 151 23 5 672 2499 25 111 77 chr13 11526692 11527045 -108757267 - RLTR10B2 LTR ERVK 0 365 1 5 672 21 0 0 0 chr13 11528820 11528841 -108755471 + AT_rich Low_complexity Low_complexity 1 21 0 5 672 183 170 62 21 chr13 11529024 11529072 -108755240 - L2 LINE L2 -484 2935 2886 5 672 508 62 104 0 chr13 11529576 11529672 -108754640 + L1Md_F3 LINE L1 6479 6584 0 5 672 27 29 0 0 chr13 11529773 11529807 -108754505 + AT_rich Low_complexity Low_complexity 1 34 0 5 672 6397 60 26 8 chr13 11529840 11530232 -108754080 + RLTR13B1 LTR ERVK 1 414 -479 5 672 3161 14 0 0 chr13 11530232 11530578 -108753734 + ORR1A0 LTR MaLR 1 346 0 5 672 6397 60 26 8 chr13 11530578 11531062 -108753250 + RLTR13B1 LTR ERVK 415 893 0 5 672 939 138 28 39 chr13 11531062 11531243 -108753069 - ORR1C1 LTR MaLR -34 344 166 5 672 236 186 23 0 chr13 11531244 11531287 -108753025 + G-rich Low_complexity Low_complexity 3 46 0 5 672 732 157 115 55 chr13 11531287 11531469 -108752843 - ORR1C1 LTR MaLR -191 193 1 5 672 5159 117 62 43 chr13 11532128 11532770 -108751542 - RMER17B LTR ERVK 0 958 335 6 672 7379 10 0 0 chr13 11532770 11533580 -108750732 + L1Md_A LINE L1 5773 6582 0 6 672 5159 117 62 43 chr13 11533580 11533877 -108750435 - RMER17B LTR ERVK -624 334 1 6 672 1299 244 91 0 chr13 11533879 11534219 -108750093 - MTD LTR MaLR -31 388 18 6 673 192 111 0 0 chr13 11534361 11534397 -108749915 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 6 673 291 214 28 50 chr13 11534400 11534582 -108749730 + (TA)n Simple_repeat Simple_repeat 2 179 0 6 673 231 208 75 0 chr13 11535364 11535417 -108748895 + L1M4b LINE L1 1166 1222 -6112 6 673 2683 91 2 0 chr13 11535537 11535934 -108748378 - MTB_Mm LTR MaLR -9 398 1 6 673 333 0 0 0 chr13 11537075 11537112 -108747200 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 673 201 121 0 0 chr13 11537112 11537145 -108747167 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 673 732 277 0 43 chr13 11537188 11537373 -108746939 - B3A SINE B2 -15 183 7 6 673 715 175 0 53 chr13 11537527 11537678 -108746634 - B1_Mur1 SINE Alu -1 148 6 7 673 408 222 116 0 chr13 11537911 11537925 -108746387 + B1F SINE Alu 5 74 -75 7 673 438 226 75 0 chr13 11537925 11538031 -108746281 + ID_B1 SINE B4 99 212 -12 7 673 408 222 116 0 chr13 11538031 11538043 -108746269 + B1F SINE Alu 75 149 0 7 673 4335 106 22 16 chr13 11538651 11539293 -108745019 + Lx LINE L1 6008 6653 -1 7 673 506 244 54 16 chr13 11539489 11539618 -108744694 - RSINE1 SINE B4 -20 145 12 7 673 463 214 10 39 chr13 11540722 11540824 -108743488 - B1F SINE Alu -10 139 41 7 673 1054 36 14 0 chr13 11540833 11540972 -108743340 + (TTTC)n Simple_repeat Simple_repeat 2 142 0 7 673 1221 62 111 0 chr13 11540976 11541138 -108743174 - B2_Mm2 SINE B2 -15 180 1 7 673 1932 173 122 8 chr13 11541164 11541542 -108742770 - MTC LTR MaLR 0 421 1 7 673 539 286 101 49 chr13 11541660 11541995 -108742317 + MLT2D LTR ERVL 14 376 -38 7 673 261 0 0 0 chr13 11541995 11542024 -108742288 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 673 539 286 101 49 chr13 11542024 11542056 -108742256 + MLT2D LTR ERVL 377 400 -14 7 673 3375 49 0 0 chr13 11542553 11542964 -108741348 - L1_Mus1 LINE L1 -486 6081 5671 8 673 859 296 40 33 chr13 11543068 11543344 -108740968 - MTEa LTR MaLR -84 295 18 8 673 2215 102 35 0 chr13 11543355 11543670 -108740642 - ORR1A2 LTR MaLR -1 326 1 8 673 343 278 28 9 chr13 11544222 11544331 -108739981 - PB1D10 SINE Alu -6 111 1 8 673 1143 238 171 19 chr13 11545107 11545523 -108738789 - RMER5 LTR ERV1 -23 511 33 8 673 180 0 0 0 chr13 11546128 11546148 -108738164 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 8 673 438 108 0 0 chr13 11546290 11546355 -108737957 + (T)n Simple_repeat Simple_repeat 1 65 0 8 673 552 256 12 53 chr13 11546520 11546689 -108737623 - RSINE1 SINE B4 0 165 4 8 673 361 298 40 5 chr13 11547538 11547694 -108736618 - L1M1 LINE L1 -703 5588 5425 8 673 2351 81 9 61 chr13 11547956 11548300 -108736012 - ORR1A2 LTR MaLR 0 327 2 9 673 281 208 0 14 chr13 11548511 11548584 -108735728 + CT-rich Low_complexity Low_complexity 4 75 0 9 673 689 269 6 12 chr13 11548624 11548797 -108735515 - ID_B1 SINE B4 -31 193 22 9 673 3461 28 5 0 chr13 11549126 11549520 -108734792 + MTA_Mm LTR MaLR 1 396 0 9 673 506 304 13 7 chr13 11550523 11550672 -108733640 + ORR1D2 LTR MaLR 1 150 -220 9 673 970 87 0 0 chr13 11550673 11550799 -108733513 - L1_Mus1 LINE L1 -331 6236 6111 9 673 3381 45 0 0 chr13 11550799 11551203 -108733109 + L1_Mus1 LINE L1 6164 6567 0 9 673 817 246 30 26 chr13 11551267 11551497 -108732815 + ORR1D2 LTR MaLR 140 370 0 9 673 555 60 24 12 chr13 11551629 11551714 -108732598 + MTA_Mm LTR MaLR 208 293 -103 9 673 2802 64 18 0 chr13 11552253 11552641 -108731671 - MTB LTR MaLR 0 400 6 9 673 5165 153 58 32 chr13 11552966 11553928 -108730384 - Lx3C LINE L1 -105 6871 5885 9 673 202 209 0 0 chr13 11554333 11554376 -108729936 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 673 740 287 6 6 chr13 11554378 11554560 -108729752 - B3A SINE B2 -16 182 1 1 673 388 261 79 56 chr13 11554741 11554867 -108729445 + B3A SINE B2 1 129 -69 1 673 1224 54 0 0 chr13 11554868 11555015 -108729297 + B1_Mm SINE Alu 1 147 0 1 673 267 200 0 18 chr13 11556219 11556275 -108728037 + Lx7 LINE L1 5705 5759 -1937 1 673 1061 199 94 106 chr13 11557609 11558024 -108726288 - RMER17C LTR ERVK 0 410 1 1 673 1191 257 82 29 chr13 11558639 11558980 -108725332 + MTEb LTR MaLR 21 379 0 1 673 188 182 23 0 chr13 11560193 11560237 -108724075 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1 673 271 309 78 0 chr13 11560287 11560397 -108723915 + MTEb LTR MaLR 236 356 -23 1 673 525 44 0 0 chr13 11561619 11561687 -108722625 + (CAG)n Simple_repeat Simple_repeat 2 69 0 1 673 499 273 21 14 chr13 11561862 11562007 -108722305 + B1F SINE Alu 1 146 -3 1 673 251 274 0 0 chr13 11562018 11562080 -108722232 + GA-rich Low_complexity Low_complexity 4 65 0 1 673 1049 315 70 16 chr13 11563023 11563290 -108721022 - MTD LTR MaLR -14 405 137 1 673 7102 39 1 2 chr13 11563290 11564090 -108720222 + L1Md_F2 LINE L1 5772 6570 -12 1 673 1049 315 88 19 chr13 11564090 11564198 -108720114 - MTD LTR MaLR -283 136 18 1 673 681 284 94 20 chr13 11564715 11564916 -108719396 + B3 SINE B2 1 216 0 1 673 204 289 19 76 chr13 11564921 11565026 -108719286 - MIRb SINE MIR -149 119 21 1 673 1949 159 56 0 chr13 11565173 11565513 -108718799 - RLTR15 LTR ERVK 0 359 1 1 673 441 0 0 0 chr13 11565800 11565849 -108718463 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 673 464 293 0 17 chr13 11567316 11567434 -108716878 + RSINE1 SINE B4 15 130 -35 1 673 447 226 25 1 chr13 11567929 11568027 -108716285 + B3 SINE B2 2 102 -91 1 673 183 80 0 0 chr13 11568303 11568328 -108715984 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 673 262 80 102 152 chr13 11569032 11569091 -108715221 + MTEa LTR MaLR 152 207 -172 1 673 882 118 12 12 chr13 11569093 11569264 -108715048 + (TAGA)n Simple_repeat Simple_repeat 4 174 0 1 673 513 270 7 35 chr13 11569321 11569463 -108714849 + MTEa LTR MaLR 242 379 0 1 673 435 184 133 0 chr13 11569535 11569633 -108714679 + ORR1D2 LTR MaLR 260 370 0 1 673 227 315 11 11 chr13 11570857 11570947 -108713365 + GA-rich Low_complexity Low_complexity 3 92 0 1 673 624 172 0 0 chr13 11572008 11572124 -108712188 + (TA)n Simple_repeat Simple_repeat 2 117 0 1 673 1174 42 7 0 chr13 11572651 11572793 -108711519 + L1_Mus1 LINE L1 6423 6565 -2 1 673 437 321 9 0 chr13 11572825 11572937 -108711375 - RSINE1 SINE B4 -36 129 17 1 673 22 56 0 0 chr13 11573130 11573166 -108711146 + AT_rich Low_complexity Low_complexity 1 36 0 1 673 361 292 83 15 chr13 11573517 11573649 -108710663 + B1F1 SINE Alu 3 143 -6 1 673 532 336 63 31 chr13 11573721 11574102 -108710210 + L1MB1 LINE L1 5522 5914 -254 1 673 1192 62 14 0 chr13 11574566 11574710 -108709602 + B1_Mm SINE Alu 1 146 -1 1 673 200 93 47 0 chr13 11574710 11574753 -108709559 + (CAAAC)n Simple_repeat Simple_repeat 5 49 0 1 673 270 0 0 0 chr13 11574843 11574873 -108709439 + (A)n Simple_repeat Simple_repeat 1 30 0 1 673 5022 90 14 0 chr13 11576017 11576705 -108707607 - L1_Mus1 LINE L1 -420 5463 4766 1 673 7762 73 4 2 chr13 11576703 11577863 -108706449 + L1_Mus1 LINE L1 5405 6567 0 1 673 1117 253 91 26 chr13 11578158 11578588 -108705724 + L1MC LINE L1 3355 3812 -2334 1 673 230 247 78 78 chr13 11578722 11578889 -108705423 + L1MC LINE L1 4312 4478 -1668 1 673 821 265 74 10 chr13 11578980 11579182 -108705130 + B3 SINE B2 2 216 0 1 673 800 249 6 17 chr13 11579424 11579604 -108704708 + B3A SINE B2 14 191 -7 1 673 449 284 65 147 chr13 11579618 11580104 -108704208 + L1M4 LINE L1 4501 4917 -1229 1 673 399 100 0 0 chr13 11580104 11580174 -108704138 + (ACTG)n Simple_repeat Simple_repeat 4 73 0 1 673 709 291 62 107 chr13 11580174 11580856 -108703456 + L1M4 LINE L1 4918 5601 -583 1 673 322 269 45 39 chr13 11581546 11581724 -108702588 + (TCTCTG)n Simple_repeat Simple_repeat 1 179 0 1 673 219 190 0 0 chr13 11582036 11582094 -108702218 + T-rich Low_complexity Low_complexity 1 58 0 1 673 237 278 0 27 chr13 11583337 11583411 -108700901 + CT-rich Low_complexity Low_complexity 1 72 0 1 673 234 86 69 0 chr13 11583615 11583673 -108700639 + T-rich Low_complexity Low_complexity 5 66 0 1 673 335 298 24 16 chr13 11584763 11584889 -108699423 + CT-rich Low_complexity Low_complexity 3 129 0 1 673 304 250 11 43 chr13 11585148 11585240 -108699072 - MIR SINE MIR -55 207 119 1 673 289 326 153 0 chr13 11585254 11585352 -108698960 + RSINE1 SINE B4 47 159 -6 1 673 711 294 131 60 chr13 11586156 11586355 -108697957 + B4 SINE B4 1 213 -11 1 673 615 308 71 11 chr13 11586866 11587050 -108697262 - ID_B1 SINE B4 -27 197 3 1 673 7525 74 4 42 chr13 11587328 11587926 -108696386 - L1Md_F2 LINE L1 0 6582 6005 1 673 1616 43 5 0 chr13 11587926 11588111 -108696201 + B2_Mm1a SINE B2 1 186 -7 1 673 35409 76 5 3 chr13 11588111 11593364 -108690948 - L1Md_F2 LINE L1 -578 6004 753 1 673 3473 14 0 0 chr13 11593364 11593731 -108690581 + IAPLTR1_Mm LTR ERVK 1 367 0 1 673 55680 21 27 2 chr13 11593731 11600045 -108684267 + IAPEz-int LTR ERVK 8 6481 0 1 673 3473 14 0 0 chr13 11600045 11600412 -108683900 + IAPLTR1_Mm LTR ERVK 1 367 0 1 673 1231 160 120 0 chr13 11600412 11600637 -108683675 - L1Md_F2 LINE L1 -5885 731 480 1 673 1315 131 34 30 chr13 11600637 11600873 -108683439 - L1VL1 LINE L1 -6156 266 30 1 673 312 272 111 39 chr13 11601421 11601574 -108682738 - L1MA9 LINE L1 -188 6124 5961 1 673 196 370 107 13 chr13 11602045 11602204 -108682108 + L2 LINE L2 2675 2848 -571 1 673 779 203 7 0 chr13 11602218 11602356 -108681956 + B1_Mus2 SINE Alu 9 147 0 1 673 747 286 60 0 chr13 11602446 11602631 -108681681 + MTE2b LTR MaLR 26 221 -158 1 673 581 271 58 6 chr13 11604262 11604418 -108679894 - B4 SINE B4 -4 288 125 1 673 796 230 221 10 chr13 11604405 11604704 -108679608 + ORR1C2 LTR MaLR 23 384 0 1 673 346 319 44 0 chr13 11604704 11604817 -108679495 - B4 SINE B4 -174 118 1 1 673 279 238 164 33 chr13 11605044 11605196 -108679116 + MER2 DNA MER2_type 97 268 -77 1 673 28 29 0 0 chr13 11605618 11605653 -108678659 + AT_rich Low_complexity Low_complexity 1 35 0 1 673 499 263 93 0 chr13 11605738 11605856 -108678456 + RSINE1 SINE B4 3 131 -34 1 673 22 0 0 0 chr13 11605856 11605878 -108678434 + AT_rich Low_complexity Low_complexity 1 22 0 1 673 289 261 33 33 chr13 11606126 11606217 -108678095 - MIR SINE MIR -61 147 57 1 673 333 0 0 0 chr13 11606516 11606553 -108677759 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1 673 456 219 143 0 chr13 11606554 11606659 -108677653 + RSINE1 SINE B4 3 122 -43 1 673 322 212 11 45 chr13 11606686 11606775 -108677537 + MLT1A1 LTR MaLR 320 405 -3 1 673 645 196 155 24 chr13 11607465 11607748 -108676564 - Lx4B LINE L1 -2 7056 6737 1 673 333 0 0 0 chr13 11607750 11607787 -108676525 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 673 300 111 0 0 chr13 11607917 11607962 -108676350 + (T)n Simple_repeat Simple_repeat 1 45 0 1 673 1370 261 82 6 chr13 11607963 11608329 -108675983 + MTD LTR MaLR 25 418 -1 1 673 302 236 21 43 chr13 11608493 11608586 -108675726 + B3A SINE B2 108 198 0 1 673 198 71 0 0 chr13 11608662 11608690 -108675622 + (TATG)n Simple_repeat Simple_repeat 4 31 0 1 673 472 277 79 16 chr13 11608800 11609045 -108675267 + B4 SINE B4 13 290 -2 1 673 344 288 29 215 chr13 11610682 11610956 -108673356 - ID_B1 SINE B4 -1 223 1 1 673 258 279 63 53 chr13 11611304 11611456 -108672856 - MER5A DNA MER1_type -25 164 10 1 673 189 0 0 0 chr13 11611716 11611737 -108672575 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 673 379 306 72 97 chr13 11611825 11612104 -108672208 + MLT1B LTR MaLR 34 305 -162 1 673 343 322 0 47 chr13 11613498 11613625 -108670687 - ID_B1 SINE B4 0 224 104 1 673 452 313 44 7 chr13 11618490 11618625 -108665687 - B4 SINE B4 -152 140 1 1 673 247 176 114 29 chr13 11619643 11619713 -108664599 - B4 SINE B4 -214 78 3 1 673 1255 34 0 0 chr13 11620120 11620267 -108664045 + B1_Mm SINE Alu 1 147 0 1 673 438 210 26 10 chr13 11620743 11620845 -108663467 + PB1D10 SINE Alu 1 113 -14 1 673 343 341 75 27 chr13 11621981 11622168 -108662144 - ID_B1 SINE B4 -27 197 2 1 673 766 196 23 40 chr13 11622833 11623008 -108661304 - MTD LTR MaLR -71 348 177 1 673 244 222 0 0 chr13 11624674 11624719 -108659593 - Lx5 LINE L1 -719 6331 6287 1 673 791 228 5 54 chr13 11624720 11624924 -108659388 + L1_Mur3 LINE L1 3692 3885 -1995 1 673 713 157 12 50 chr13 11624924 11625085 -108659227 - RMER10A LTR ERVL -286 156 2 1 673 795 40 0 0 chr13 11625426 11625525 -108658787 + (TC)n Simple_repeat Simple_repeat 2 100 0 1 673 414 0 0 0 chr13 11625974 11626020 -108658292 + (GA)n Simple_repeat Simple_repeat 2 47 0 1 673 204 40 0 0 chr13 11626088 11626113 -108658199 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 1 673 513 0 0 0 chr13 11626789 11626846 -108657466 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 673 369 0 0 0 chr13 11627266 11627307 -108657005 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 673 261 255 130 20 chr13 11628596 11628696 -108655616 - PB1D10 SINE Alu -1 119 9 1 673 192 158 0 0 chr13 11629097 11629135 -108655177 + GA-rich Low_complexity Low_complexity 4 41 0 1 673 219 220 0 0 chr13 11629550 11629600 -108654712 + CT-rich Low_complexity Low_complexity 1 50 0 1 673 903 262 48 61 chr13 11629657 11629898 -108654414 + MTE2a LTR MaLR 1 209 -170 1 673 567 0 0 0 chr13 11629898 11629961 -108654351 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 673 903 260 45 32 chr13 11629961 11630115 -108654197 + MTE2a LTR MaLR 210 372 -7 1 673 3625 54 45 2 chr13 11630142 11630604 -108653708 + RLTR45 LTR ERVK 1 482 0 1 673 753 256 183 36 chr13 11630663 11630996 -108653316 - L1MC2 LINE L1 -157 6187 5806 1 673 312 257 106 42 chr13 11631386 11631528 -108652784 - HAL1-3A_ME LINE L1 -420 2438 2288 2 673 186 171 0 0 chr13 11631536 11631577 -108652735 + CT-rich Low_complexity Low_complexity 1 41 0 2 673 188 178 89 0 chr13 11631579 11631624 -108652688 + MIR SINE MIR 108 156 -106 2 673 330 321 41 35 chr13 11631673 11631818 -108652494 + B4A SINE B4 29 174 -118 2 673 24 0 0 0 chr13 11632726 11632750 -108651562 + AT_rich Low_complexity Low_complexity 1 24 0 2 673 288 91 0 0 chr13 11632835 11632879 -108651433 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 673 389 293 7 20 chr13 11633189 11633339 -108650973 - LTR16E2 LTR ERVL -18 550 403 2 673 396 0 0 0 chr13 11633430 11633474 -108650838 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 673 203 88 29 0 chr13 11633768 11633802 -108650510 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 2 673 767 308 0 5 chr13 11633802 11634024 -108650288 - B4 SINE B4 -69 223 3 2 673 634 320 134 12 chr13 11634034 11634363 -108649949 + MER57C2 LTR ERV1 1 369 -65 2 673 300 91 0 0 chr13 11635580 11635624 -108648688 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 673 534 230 99 35 chr13 11635652 11635823 -108648489 - B3A SINE B2 -8 190 9 2 673 594 280 46 20 chr13 11636866 11637019 -108647293 + RSINE1 SINE B4 9 165 0 2 673 225 65 0 0 chr13 11637020 11637051 -108647261 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 673 265 203 48 60 chr13 11637484 11637568 -108646744 - B1F SINE Alu -49 100 18 2 673 279 0 0 0 chr13 11637669 11637700 -108646612 + (A)n Simple_repeat Simple_repeat 1 31 0 2 673 204 310 0 0 chr13 11637835 11637893 -108646419 + GA-rich Low_complexity Low_complexity 2 59 0 2 673 374 0 22 0 chr13 11638542 11638588 -108645724 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 673 225 0 0 0 chr13 11639887 11639912 -108644400 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2 673 1157 68 0 7 chr13 11639917 11640065 -108644247 - B1_Mm SINE Alu 0 147 1 2 673 699 319 42 22 chr13 11640175 11640580 -108643732 - MLT1E2 LTR MaLR -4 501 187 2 673 2904 145 105 8 chr13 11640662 11641178 -108643134 - Lx2B LINE L1 -1 6999 6434 2 673 246 31 0 0 chr13 11641176 11641208 -108643104 + Lx LINE L1 6046 6077 -577 2 673 1520 264 66 38 chr13 11641287 11641870 -108642442 - RLTR1 LTR ERV1 -21 603 30 2 673 256 82 0 20 chr13 11642086 11642131 -108642181 - B1_Mus2 SINE Alu 0 147 104 2 673 402 169 52 0 chr13 11642131 11642208 -108642104 + B1_Mus1 SINE Alu 2 82 -66 2 673 2473 119 77 25 chr13 11642690 11643121 -108641191 + RLTR11B LTR ERVK 1 453 0 2 673 301 296 78 0 chr13 11643825 11643940 -108640372 + MTEa LTR MaLR 1 124 -235 2 673 399 281 25 8 chr13 11644027 11644149 -108640163 + MTEa LTR MaLR 250 373 -6 2 673 220 304 164 23 chr13 11644275 11644403 -108639909 - ID_B1 SINE B4 0 224 79 2 673 719 101 8 0 chr13 11646627 11646746 -108637566 + (GA)n Simple_repeat Simple_repeat 1 120 0 2 673 398 262 36 51 chr13 11647445 11647582 -108636730 - B3 SINE B2 -37 179 45 2 673 259 299 22 22 chr13 11647987 11648076 -108636236 - PB1D9 SINE Alu -15 105 17 2 673 225 234 0 0 chr13 11648361 11648425 -108635887 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 673 296 263 10 40 chr13 11649276 11649375 -108634937 + RMER15 LTR ERVL 337 432 -143 2 673 276 30 0 0 chr13 11649385 11649418 -108634894 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 673 264 310 50 10 chr13 11649548 11649649 -108634663 + RMER15 LTR ERVL 454 558 -17 2 673 594 235 43 116 chr13 11650911 11651118 -108633194 - B3A SINE B2 -2 193 2 2 673 597 278 40 85 chr13 11651829 11652077 -108632235 + B4 SINE B4 3 239 -53 2 673 509 0 16 0 chr13 11652109 11652170 -108632142 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 673 1789 207 24 22 chr13 11652170 11652585 -108631727 + RMER5 LTR ERV1 102 517 -17 2 673 455 70 0 14 chr13 11653719 11653792 -108630520 + (TA)n Simple_repeat Simple_repeat 2 73 0 2 673 1189 42 7 0 chr13 11653794 11653936 -108630376 - B1_Mm SINE Alu -4 143 1 2 673 486 0 0 0 chr13 11654093 11654147 -108630165 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 673 457 257 70 32 chr13 11654158 11654343 -108629969 - Lx6 LINE L1 -4 7456 7265 2 673 23 33 0 0 chr13 11654379 11654409 -108629903 + AT_rich Low_complexity Low_complexity 1 30 0 2 673 240 304 128 49 chr13 11656564 11656768 -108627544 + ORR1E LTR MaLR 98 317 -42 2 673 1196 62 0 0 chr13 11657305 11657451 -108626861 + B1_Mus2 SINE Alu 2 147 0 2 673 425 240 71 26 chr13 11657479 11657633 -108626679 - RSINE1 SINE B4 -4 161 1 2 673 22 56 0 0 chr13 11657736 11657772 -108626540 + AT_rich Low_complexity Low_complexity 1 36 0 2 673 870 306 56 53 chr13 11658284 11658625 -108625687 + ORR1E LTR MaLR 3 344 -15 2 673 477 258 49 19 chr13 11659601 11659763 -108624549 - B3 SINE B2 0 216 50 2 673 258 276 99 31 chr13 11661583 11661597 -108622715 - B2_Mm2 SINE B2 -19 176 163 2 673 573 76 0 0 chr13 11661597 11661676 -108622636 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 673 432 196 176 24 chr13 11661676 11661822 -108622490 - B3 SINE B2 -27 171 5 2 673 6891 65 5 3 chr13 11662376 11663251 -108621061 - L1_Mus2 LINE L1 0 6566 5691 2 673 21 0 0 0 chr13 11664244 11664265 -108620047 + AT_rich Low_complexity Low_complexity 1 21 0 2 673 201 140 39 20 chr13 11664826 11664877 -108619435 + (TATG)n Simple_repeat Simple_repeat 4 55 0 2 673 452 170 46 12 chr13 11664905 11664916 -108619396 + (TG)n Simple_repeat Simple_repeat 1 11 0 2 673 382 102 14 14 chr13 11664916 11664986 -108619326 + (TATG)n Simple_repeat Simple_repeat 4 73 0 2 673 452 170 46 12 chr13 11664986 11665147 -108619165 + (TG)n Simple_repeat Simple_repeat 2 168 0 2 673 315 214 274 67 chr13 11665147 11665282 -108619030 - RSINE1 SINE B4 0 165 3 2 673 414 0 0 0 chr13 11665306 11665352 -108618960 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 674 810 255 25 10 chr13 11665481 11665679 -108618633 - B3 SINE B2 0 216 16 2 674 224 149 21 0 chr13 11665780 11665827 -108618485 + G-rich Low_complexity Low_complexity 6 53 0 2 674 425 110 0 14 chr13 11665875 11665949 -108618363 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 674 749 244 60 34 chr13 11665987 11666254 -108618058 - B4A SINE B4 -17 275 2 2 674 291 280 60 0 chr13 11666723 11666823 -108617489 - B4A SINE B4 -179 113 8 2 674 708 12 0 0 chr13 11667853 11667934 -108616378 + (GA)n Simple_repeat Simple_repeat 1 81 0 2 674 21 0 0 0 chr13 11668393 11668414 -108615898 + AT_rich Low_complexity Low_complexity 1 21 0 2 674 476 331 33 20 chr13 11668446 11668597 -108615715 - RSINE1 SINE B4 -8 157 5 2 674 321 205 0 114 chr13 11668637 11668725 -108615587 + ID2 SINE ID 2 79 -4 2 674 270 281 18 135 chr13 11669321 11669337 -108614975 + ID_B1 SINE B4 123 186 -38 2 674 293 282 34 45 chr13 11669337 11669426 -108614886 + B1F SINE Alu 52 139 -10 2 674 2357 153 32 22 chr13 11669503 11669911 -108614401 + MTC LTR MaLR 2 413 -8 2 674 458 380 0 0 chr13 11670587 11670615 -108613697 + B4A SINE B4 58 85 -207 2 674 277 322 41 41 chr13 11670615 11670738 -108613574 + B1_Mur3 SINE Alu 1 123 -26 2 674 354 259 35 0 chr13 11670837 11670922 -108613390 + B4 SINE B4 200 287 -5 2 674 222 191 0 0 chr13 11670934 11670981 -108613331 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 674 22043 147 12 11 chr13 11671124 11675247 -108609065 + Lx LINE L1 2006 6130 -524 2 674 423 56 0 0 chr13 11675263 11675317 -108608995 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 674 550 246 45 15 chr13 11675612 11675744 -108608568 + B1F SINE Alu 7 142 -7 2 674 422 235 34 108 chr13 11675744 11675760 -108608552 + ID_B1 SINE B4 88 224 0 2 674 198 239 13 141 chr13 11675814 11675892 -108608420 - MIRc SINE MIR -42 226 159 2 674 195 129 0 0 chr13 11676042 11676073 -108608239 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 674 338 225 12 24 chr13 11676748 11676830 -108607482 + ID4_ SINE ID 3 83 0 2 674 359 275 25 0 chr13 11676939 11677019 -108607293 + ID4_ SINE ID 2 83 0 2 674 2976 71 64 23 chr13 11678227 11678618 -108605694 + MTB_Mm LTR MaLR 1 407 0 2 674 192 254 0 73 chr13 11680567 11680635 -108603677 - L2a LINE L2 0 3387 3325 2 674 262 302 63 34 chr13 11680710 11680885 -108603427 - L2a LINE L2 -221 3205 3026 2 674 653 221 92 0 chr13 11680886 11681017 -108603295 + B3A SINE B2 1 143 -55 2 674 339 25 0 0 chr13 11681043 11681083 -108603229 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 674 995 214 42 33 chr13 11682883 11683096 -108601216 + B3 SINE B2 2 216 0 2 674 558 350 28 20 chr13 11683218 11683469 -108600843 + MER2 DNA MER2_type 91 343 -2 2 674 701 294 135 45 chr13 11683768 11684035 -108600277 - B4 SINE B4 0 292 2 2 674 418 272 29 19 chr13 11684357 11684462 -108599850 - B1F SINE Alu -10 139 34 2 674 381 270 150 0 chr13 11684650 11684750 -108599562 - RSINE1 SINE B4 -48 117 3 2 674 349 232 79 34 chr13 11684992 11685081 -108599231 - RSINE1 SINE B4 -4 161 69 2 674 812 316 46 58 chr13 11685522 11685781 -108598531 - B4 SINE B4 0 292 37 2 674 1691 235 58 12 chr13 11685782 11686182 -108598130 - MTD LTR MaLR -1 418 1 2 674 279 0 0 0 chr13 11686748 11686779 -108597533 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 674 418 59 59 0 chr13 11686847 11686915 -108597397 + (GGGAGA)n Simple_repeat Simple_repeat 4 75 0 2 674 245 316 0 13 chr13 11688572 11688649 -108595663 + CT-rich Low_complexity Low_complexity 4 79 0 2 674 1033 257 106 51 chr13 11688888 11689200 -108595112 + MTE2a LTR MaLR 51 379 0 3 674 603 274 13 7 chr13 11689819 11689973 -108594339 - RSINE1 SINE B4 0 165 11 3 674 344 59 20 0 chr13 11690485 11690536 -108593776 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 674 34 42 0 0 chr13 11690594 11690642 -108593670 + AT_rich Low_complexity Low_complexity 1 48 0 3 674 343 215 180 55 chr13 11691231 11691359 -108592953 + ID_B1 SINE B4 81 224 0 3 674 21 0 0 0 chr13 11691509 11691530 -108592782 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 191 88 29 0 chr13 11691575 11691609 -108592703 + (TA)n Simple_repeat Simple_repeat 2 36 0 3 674 237 318 60 76 chr13 11691986 11692170 -108592142 + B4 SINE B4 1 181 -111 3 674 515 250 70 0 chr13 11693362 11693490 -108590822 + B3 SINE B2 67 203 -13 3 674 383 173 12 0 chr13 11693492 11693573 -108590739 + (TA)n Simple_repeat Simple_repeat 1 82 0 3 674 507 60 36 0 chr13 11693658 11693742 -108590570 + (TCTA)n Simple_repeat Simple_repeat 2 88 0 3 674 259 343 7 48 chr13 11693811 11693958 -108590354 - ID_B1 SINE B4 -2 222 82 3 674 308 296 217 0 chr13 11694878 11694993 -108589319 + HAL1-3A_ME LINE L1 2284 2423 -435 3 674 1043 97 6 0 chr13 11695003 11695179 -108589133 + (GGGGA)n Simple_repeat Simple_repeat 4 180 0 3 674 228 289 37 93 chr13 11695221 11695328 -108588984 + ID_B1 SINE B4 84 184 -40 3 674 452 62 0 15 chr13 11695424 11695489 -108588823 + (TTTC)n Simple_repeat Simple_repeat 2 65 0 3 674 313 291 15 0 chr13 11696204 11696282 -108588030 + ID4_ SINE ID 13 91 -61 3 674 458 165 239 17 chr13 11696743 11696860 -108587452 + B1F2 SINE Alu 1 143 -6 3 674 300 277 0 60 chr13 11696863 11696963 -108587349 + GA-rich Low_complexity Low_complexity 2 95 0 3 674 381 109 0 0 chr13 11696969 11697033 -108587279 + (TGGA)n Simple_repeat Simple_repeat 1 64 0 3 674 510 219 0 0 chr13 11697051 11697197 -108587115 + GA-rich Low_complexity Low_complexity 3 148 0 3 674 22 0 0 0 chr13 11697931 11697953 -108586359 + AT_rich Low_complexity Low_complexity 1 22 0 3 674 396 0 0 0 chr13 11699078 11699122 -108585190 + (TATG)n Simple_repeat Simple_repeat 2 45 0 3 674 1515 248 66 22 chr13 11701136 11701499 -108582813 + MTE2a LTR MaLR 1 379 0 3 674 2003 220 24 7 chr13 11701620 11702032 -108582280 + MTD LTR MaLR 1 419 0 3 674 955 284 115 45 chr13 11702800 11703116 -108581196 + RMER5 LTR ERV1 33 391 -143 3 674 180 0 0 0 chr13 11703116 11703136 -108581176 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 674 955 284 115 45 chr13 11703136 11703288 -108581024 + RMER5 LTR ERV1 392 533 -1 3 674 2883 72 28 22 chr13 11703924 11704281 -108580031 + RLTR10D LTR ERVK 1 359 0 3 674 811 98 11 177 chr13 11704281 11704467 -108579845 + IAP-d-int LTR ERVK 1 155 -6387 3 674 409 111 48 0 chr13 11704467 11704530 -108579782 + IAP-d-int LTR ERVK 107 172 -6370 3 674 721 256 0 0 chr13 11704531 11704703 -108579609 + IAP-d-int LTR ERVK 349 520 -6022 3 674 1713 210 83 6 chr13 11704686 11705035 -108579277 + IAP-d-int LTR ERVK 5007 5382 -1160 3 674 6204 95 0 36 chr13 11705022 11705915 -108578397 + IAP-d-int LTR ERVK 5673 6533 -9 3 674 2827 72 28 23 chr13 11705915 11706269 -108578043 + RLTR10D LTR ERVK 4 359 0 3 674 889 146 66 0 chr13 11706593 11706730 -108577582 - B1_Mur2 SINE Alu -3 146 1 3 674 233 194 0 56 chr13 11706851 11706922 -108577390 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 3 674 198 233 0 0 chr13 11707140 11707200 -108577112 + A-rich Low_complexity Low_complexity 1 60 0 3 674 1932 48 13 0 chr13 11707231 11707459 -108576853 + L1Md_T LINE L1 6352 6582 0 3 674 222 245 0 0 chr13 11707462 11707511 -108576801 + A-rich Low_complexity Low_complexity 1 49 0 3 674 209 119 24 0 chr13 11708695 11708737 -108575575 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 674 386 69 17 0 chr13 11709194 11709252 -108575060 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 674 626 296 36 36 chr13 11709279 11709553 -108574759 - B4A SINE B4 -18 274 1 3 674 243 0 0 0 chr13 11710092 11710119 -108574193 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 3 674 821 304 107 16 chr13 11711881 11712246 -108572066 + Lx8 LINE L1 6875 7272 -201 3 674 21 0 0 0 chr13 11713264 11713285 -108571027 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 21 57 0 0 chr13 11714368 11714403 -108569909 + AT_rich Low_complexity Low_complexity 1 35 0 3 674 313 278 14 0 chr13 11714923 11714995 -108569317 + MER58A DNA MER1_type 7 79 -145 3 674 204 135 0 26 chr13 11716389 11716427 -108567885 + A-rich Low_complexity Low_complexity 3 39 0 3 674 795 116 13 20 chr13 11717810 11717959 -108566353 + (TTTC)n Simple_repeat Simple_repeat 4 151 0 3 674 1409 271 46 16 chr13 11720265 11720633 -108563679 + MTEa LTR MaLR 1 379 0 3 674 568 185 0 21 chr13 11720811 11720905 -108563407 - B1_Mur3 SINE Alu -56 93 2 3 674 21 0 0 0 chr13 11721383 11721404 -108562908 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 3976 47 15 2 chr13 11721839 11722312 -108562000 - L1_Mus1 LINE L1 0 6567 6089 3 674 322 305 185 39 chr13 11722329 11722534 -108561778 - MIR SINE MIR -20 242 8 3 674 189 107 0 0 chr13 11723917 11723945 -108560367 + (CAG)n Simple_repeat Simple_repeat 2 29 0 3 674 258 143 0 0 chr13 11723952 11724001 -108560311 + (TAA)n Simple_repeat Simple_repeat 1 49 0 3 674 575 252 9 0 chr13 11724278 11724393 -108559919 - B3A SINE B2 -38 160 45 3 674 188 182 23 0 chr13 11726180 11726224 -108558088 + A-rich Low_complexity Low_complexity 2 46 0 3 674 195 100 0 0 chr13 11726838 11726868 -108557444 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 674 182 276 125 11 chr13 11728526 11728614 -108555698 + MIR SINE MIR 24 121 -141 3 674 651 172 8 17 chr13 11730039 11730157 -108554155 - B3A SINE B2 -81 117 1 3 674 385 253 104 49 chr13 11730179 11730362 -108553950 - B2_Mm2 SINE B2 -2 193 1 3 674 1087 253 24 27 chr13 11732039 11732332 -108551980 - B4 SINE B4 0 292 1 3 674 275 290 14 0 chr13 11732704 11732773 -108551539 + ID_B1 SINE B4 76 145 -79 3 674 264 327 29 38 chr13 11732715 11732820 -108551492 + PB1D10 SINE Alu 7 110 -7 3 674 636 313 0 26 chr13 11733040 11733194 -108551118 - B4A SINE B4 0 292 143 3 674 228 125 17 67 chr13 11733195 11733277 -108551035 + (TATATG)n Simple_repeat Simple_repeat 1 77 0 3 674 1168 75 0 0 chr13 11733395 11733541 -108550771 - B1_Mus2 SINE Alu 0 147 2 3 674 585 268 111 0 chr13 11734052 11734242 -108550070 + ID_B1 SINE B4 1 211 -13 3 674 4710 49 3 2 chr13 11734694 11735298 -108549014 - L1_Mus1 LINE L1 0 6567 5983 3 674 3561 58 8 0 chr13 11735298 11735885 -108548427 + L1_Mus1 LINE L1 5376 5966 -601 3 674 23 0 0 0 chr13 11736254 11736277 -108548035 + AT_rich Low_complexity Low_complexity 1 23 0 3 674 692 297 18 0 chr13 11736722 11736887 -108547425 + B3A SINE B2 1 168 -30 3 674 243 0 0 0 chr13 11736977 11737004 -108547308 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 674 1437 240 69 0 chr13 11737711 11738057 -108546255 + ORR1D2 LTR MaLR 1 370 0 3 674 277 362 122 34 chr13 11738295 11738532 -108545780 - MIR SINE MIR -4 258 1 3 674 299 246 0 0 chr13 11739241 11739298 -108545014 - B4 SINE B4 -20 272 216 3 674 797 273 12 6 chr13 11739326 11739499 -108544813 - B4 SINE B4 -69 223 50 3 674 189 180 0 0 chr13 11739534 11739584 -108544728 + T-rich Low_complexity Low_complexity 2 51 0 3 674 902 299 20 47 chr13 11740878 11741176 -108543136 - B4A SINE B4 -1 291 2 3 674 25 31 0 0 chr13 11741928 11741960 -108542352 + AT_rich Low_complexity Low_complexity 1 32 0 3 674 229 316 33 33 chr13 11742265 11742478 -108541834 + L1MA9 LINE L1 6057 6269 -43 3 674 3393 186 67 48 chr13 11742695 11744011 -108540301 + L1_Mur3 LINE L1 545 1890 -3990 3 674 654 68 0 0 chr13 11744011 11744099 -108540213 + (GGAGA)n Simple_repeat Simple_repeat 2 89 0 3 674 596 204 201 13 chr13 11744412 11744561 -108539751 - B3A SINE B2 -18 180 4 3 674 468 278 8 65 chr13 11745998 11746121 -108538191 - PB1D10 SINE Alu 0 117 2 3 674 562 296 56 0 chr13 11746856 11746998 -108537314 - B3A SINE B2 -47 151 2 3 674 370 357 69 23 chr13 11748385 11748426 -108535886 + ID_B1 SINE B4 42 224 0 3 674 575 189 44 26 chr13 11748426 11748560 -108535752 + B1_Mus1 SINE Alu 11 147 -2 3 674 922 208 28 24 chr13 11748666 11748878 -108535434 - B3 SINE B2 -3 213 1 3 674 21 0 0 0 chr13 11749232 11749253 -108535059 + AT_rich Low_complexity Low_complexity 1 21 0 3 674 321 217 29 0 chr13 11749575 11749644 -108534668 - ID4 SINE ID -10 73 3 3 674 323 326 23 8 chr13 11749662 11749792 -108534520 - B1F SINE Alu -13 136 5 3 674 24 32 0 0 chr13 11750088 11750119 -108534193 + AT_rich Low_complexity Low_complexity 1 31 0 3 674 259 231 257 9 chr13 11750563 11750672 -108533640 + B1F SINE Alu 4 139 -10 3 674 233 217 203 0 chr13 11750869 11750938 -108533374 + PB1D10 SINE Alu 28 110 -7 3 674 956 115 13 0 chr13 11751405 11751562 -108532750 + (TTCC)n Simple_repeat Simple_repeat 2 160 0 3 674 492 99 0 0 chr13 11751562 11751633 -108532679 + (TC)n Simple_repeat Simple_repeat 2 72 0 3 674 568 179 142 25 chr13 11751640 11751760 -108532552 - B1_Mur1 SINE Alu 0 149 16 3 674 611 135 15 15 chr13 11751929 11752064 -108532248 + (TA)n Simple_repeat Simple_repeat 2 136 0 3 674 203 173 19 0 chr13 11753125 11753177 -108531135 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 674 671 305 19 141 chr13 11753721 11754153 -108530159 + MTE2a LTR MaLR 1 379 0 3 674 207 0 0 0 chr13 11755495 11755518 -108528794 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 674 695 44 11 0 chr13 11756114 11756205 -108528107 + (TC)n Simple_repeat Simple_repeat 1 92 0 3 674 244 250 14 14 chr13 11757330 11757399 -108526913 + (CATA)n Simple_repeat Simple_repeat 4 72 0 3 674 261 233 17 0 chr13 11757879 11757939 -108526373 + CT-rich Low_complexity Low_complexity 1 61 0 3 674 783 270 31 85 chr13 11758777 11759036 -108525276 - B4A SINE B4 0 292 48 3 674 604 297 41 34 chr13 11759923 11760135 -108524177 - B3A SINE B2 -6 210 6 3 674 320 182 0 25 chr13 11761614 11761693 -108522619 + (TATG)n Simple_repeat Simple_repeat 1 77 0 4 674 519 173 35 0 chr13 11761704 11761877 -108522435 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 674 553 267 91 59 chr13 11762852 11763039 -108521273 - B3A SINE B2 -1 197 5 4 674 204 97 0 0 chr13 11763155 11763186 -108521126 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 674 306 0 0 0 chr13 11764135 11764169 -108520143 + (T)n Simple_repeat Simple_repeat 1 34 0 4 674 253 283 68 22 chr13 11764227 11764337 -108519975 - L2b LINE L2 0 3426 3286 4 674 279 0 0 0 chr13 11765742 11765773 -108518539 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 674 535 322 53 0 chr13 11765776 11765928 -108518384 - B3A SINE B2 -38 160 1 4 674 322 368 67 29 chr13 11766769 11766979 -108517333 + L1ME3 LINE L1 5923 6140 -22 4 674 435 38 0 0 chr13 11767509 11767562 -108516750 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 674 265 331 8 16 chr13 11768522 11768645 -108515667 + GA-rich Low_complexity Low_complexity 2 123 0 4 674 210 71 0 0 chr13 11768663 11768691 -108515621 + (A)n Simple_repeat Simple_repeat 1 28 0 4 674 394 306 28 0 chr13 11769903 11770047 -108514265 - B1F SINE Alu -1 148 1 4 674 297 0 0 0 chr13 11771050 11771083 -108513229 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 674 258 56 0 0 chr13 11771088 11771124 -108513188 + (TCTG)n Simple_repeat Simple_repeat 3 38 0 4 674 850 219 13 0 chr13 11771154 11771309 -108513003 - B3A SINE B2 -41 157 1 4 674 441 0 0 0 chr13 11771680 11771729 -108512583 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 674 604 120 0 31 chr13 11772103 11772232 -108512080 + (CAGA)n Simple_repeat Simple_repeat 2 126 0 4 674 351 0 0 0 chr13 11772723 11772762 -108511550 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 4 674 28 0 0 0 chr13 11772788 11772816 -108511496 + AT_rich Low_complexity Low_complexity 1 28 0 4 674 351 176 0 105 chr13 11773533 11773628 -108510684 + RMER12 LTR ERVK 771 855 -467 4 674 342 0 0 0 chr13 11773927 11773965 -108510347 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 674 1852 236 59 98 chr13 11774187 11775182 -108509130 + RMER17B LTR ERVK 1 906 -52 4 674 3333 46 2 0 chr13 11775567 11775962 -108508350 + MTA_Mm LTR MaLR 1 396 0 4 674 332 272 35 17 chr13 11777033 11777149 -108507163 + MTD LTR MaLR 1 118 -301 4 674 3347 53 0 20 chr13 11777586 11777990 -108506322 + MTA_Mm LTR MaLR 1 396 0 4 674 357 24 0 0 chr13 11778107 11778149 -108506163 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 674 198 0 0 0 chr13 11778155 11778177 -108506135 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 674 469 235 25 16 chr13 11778183 11778304 -108506008 - B1F SINE Alu -18 131 10 4 674 390 173 0 0 chr13 11778465 11778540 -108505772 + GA-rich Low_complexity Low_complexity 3 77 0 4 674 706 225 41 21 chr13 11778673 11778818 -108505494 + B1_Mur2 SINE Alu 1 148 -1 4 674 24 0 0 0 chr13 11779419 11779443 -108504869 + AT_rich Low_complexity Low_complexity 1 24 0 4 674 883 265 119 53 chr13 11779707 11780060 -108504252 + MTE2a LTR MaLR 18 365 -14 4 674 624 225 21 21 chr13 11780746 11780887 -108503425 + ID_B1 SINE B4 84 224 0 4 674 224 279 148 0 chr13 11781229 11781290 -108503022 - ID4_ SINE ID -13 70 1 4 674 356 163 12 0 chr13 11781526 11781612 -108502700 + (CA)n Simple_repeat Simple_repeat 2 88 0 4 674 701 253 64 11 chr13 11781742 11781930 -108502382 + B3A SINE B2 1 198 0 4 674 210 269 194 0 chr13 11782069 11782136 -108502176 + ID4_ SINE ID 3 82 -1 4 674 485 276 47 42 chr13 11783565 11783621 -108500691 - B3 SINE B2 -3 213 161 4 674 426 39 0 0 chr13 11783621 11783673 -108500639 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 674 571 250 71 13 chr13 11783673 11783828 -108500484 - B3A SINE B2 -35 163 1 4 674 252 334 26 10 chr13 11783853 11783966 -108500346 - Tigger7 DNA MER2_type 0 2491 2391 4 674 564 334 107 0 chr13 11784031 11784290 -108500022 - MER44C DNA MER2_type -389 344 60 4 674 781 189 99 26 chr13 11784305 11784681 -108499631 + RLTR20A1 LTR ERVK 1 430 -121 4 674 26341 22 0 1 chr13 11785121 11788835 -108495477 - L1Md_T LINE L1 0 6582 2871 4 674 390 239 110 0 chr13 11789142 11789251 -108495061 + Lx8 LINE L1 6776 6896 -577 4 674 362 120 13 0 chr13 11789267 11789342 -108494970 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 674 612 230 118 0 chr13 11789342 11789503 -108494809 + Lx8 LINE L1 6972 7151 -322 4 674 308 267 207 75 chr13 11789563 11789737 -108494575 + B3A SINE B2 2 198 0 4 674 459 0 0 0 chr13 11789969 11790020 -108494292 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 674 339 25 0 0 chr13 11790020 11790059 -108494253 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 674 537 284 51 35 chr13 11790165 11790362 -108493950 + MTE2a LTR MaLR 172 371 -8 4 674 3473 74 50 11 chr13 11791095 11791572 -108492740 - L1_Mm LINE L1 -676 5207 4712 4 674 2767 66 0 6 chr13 11791577 11791914 -108492398 + L1_Mus1 LINE L1 6233 6567 0 4 674 700 283 104 10 chr13 11791963 11792156 -108492156 - ID_B1 SINE B4 -9 215 5 4 674 293 311 44 11 chr13 11792190 11792281 -108492031 - PB1 SINE Alu -9 118 25 4 674 468 111 0 0 chr13 11792395 11792467 -108491845 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 674 285 211 84 0 chr13 11792846 11792917 -108491395 + RSINE1 SINE B4 87 163 -2 4 674 21 57 0 0 chr13 11793142 11793177 -108491135 + AT_rich Low_complexity Low_complexity 1 35 0 4 674 238 224 121 0 chr13 11793281 11793339 -108490973 - ID4 SINE ID -12 71 7 4 674 371 276 95 22 chr13 11793353 11793490 -108490822 - B1F SINE Alu -2 147 1 4 674 1229 244 183 8 chr13 11794103 11794458 -108489854 + MTD LTR MaLR 1 417 -2 4 674 432 0 0 0 chr13 11794923 11794971 -108489341 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 674 207 0 0 0 chr13 11795044 11795067 -108489245 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 674 902 167 0 0 chr13 11795080 11795218 -108489094 - B1_Mur4 SINE Alu -5 145 8 4 674 226 241 0 65 chr13 11795497 11795559 -108488753 - MLT1J LTR MaLR -103 409 352 4 674 331 206 115 19 chr13 11795517 11795621 -108488691 + B4A SINE B4 173 286 -6 4 674 22 80 0 0 chr13 11796059 11796109 -108488203 + AT_rich Low_complexity Low_complexity 1 50 0 4 675 760 298 102 34 chr13 11798106 11798429 -108485883 + ORR1E LTR MaLR 1 345 -14 4 675 346 259 24 129 chr13 11798599 11798731 -108485581 - PB1D10 SINE Alu 0 120 2 4 675 795 279 0 27 chr13 11799224 11799412 -108484900 + B3A SINE B2 2 184 -14 4 675 414 0 0 0 chr13 11799837 11799883 -108484429 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 675 414 0 0 0 chr13 11799883 11799928 -108484384 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 675 561 115 0 0 chr13 11801467 11801554 -108482758 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 675 989 263 79 19 chr13 11801567 11801751 -108482561 - B4A SINE B4 0 292 93 4 675 324 0 0 0 chr13 11801751 11801787 -108482525 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 675 989 263 79 19 chr13 11801787 11801869 -108482443 - B4A SINE B4 -200 92 11 4 675 21 0 0 0 chr13 11802439 11802460 -108481852 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 943 135 7 28 chr13 11802684 11802829 -108481483 + B1_Mur3 SINE Alu 2 143 -6 4 675 423 0 0 0 chr13 11802831 11802878 -108481434 + (TAGA)n Simple_repeat Simple_repeat 1 47 0 4 675 181 271 100 0 chr13 11803310 11803380 -108480932 + L3 LINE CR1 2539 2615 -1874 4 675 21 0 0 0 chr13 11803417 11803438 -108480874 + AT_rich Low_complexity Low_complexity 1 21 0 4 675 265 114 0 0 chr13 11804108 11804143 -108480169 - RSINE1 SINE B4 -77 88 54 4 675 933 98 0 0 chr13 11805762 11805884 -108478428 - B1_Mus1 SINE Alu -20 128 7 4 675 369 286 53 9 chr13 11805786 11805899 -108478413 - B4A SINE B4 -98 194 77 4 675 482 316 29 12 chr13 11805977 11806150 -108478162 - Lx8 LINE L1 -139 7334 7159 4 675 504 281 42 32 chr13 11806162 11806379 -108477933 + Lx8 LINE L1 6887 7105 -368 4 675 189 0 0 0 chr13 11806990 11807011 -108477301 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 675 351 0 0 0 chr13 11807014 11807053 -108477259 + (TTG)n Simple_repeat Simple_repeat 2 40 0 4 675 561 295 101 11 chr13 11807210 11807388 -108476924 - B3A SINE B2 -4 194 1 4 675 222 237 17 17 chr13 11807529 11807589 -108476723 + (CATA)n Simple_repeat Simple_repeat 4 63 0 4 675 700 346 61 15 chr13 11808515 11808779 -108475533 + B4A SINE B4 1 276 -16 4 675 203 234 43 0 chr13 11808786 11808833 -108475479 + (CATG)n Simple_repeat Simple_repeat 3 51 0 4 675 225 0 0 0 chr13 11809575 11809600 -108474712 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 4 675 472 226 11 0 chr13 11809614 11809707 -108474605 - RSINE1 SINE B4 -69 96 3 4 675 248 307 62 21 chr13 11809916 11810082 -108474230 + MTEb LTR MaLR 201 372 -7 4 675 23 33 0 0 chr13 11810303 11810333 -108473979 + AT_rich Low_complexity Low_complexity 1 30 0 4 675 860 249 5 58 chr13 11810383 11810588 -108473724 - B3A SINE B2 0 198 5 4 675 687 262 81 38 chr13 11810879 11811073 -108473239 - B3A SINE B2 -21 177 2 4 675 394 319 60 56 chr13 11812116 11812435 -108471877 - L1ME1 LINE L1 -124 6055 5736 4 675 387 322 115 19 chr13 11813236 11813496 -108470816 - L2 LINE L2 -338 3081 2797 4 675 987 282 71 31 chr13 11814480 11814805 -108469507 + MTEa LTR MaLR 39 376 -3 4 675 441 276 0 0 chr13 11814846 11814944 -108469368 - B3A SINE B2 -100 98 1 4 675 1113 171 75 0 chr13 11815645 11815844 -108468468 - URR1A DNA MER1_type -6 220 7 4 675 279 0 0 0 chr13 11816397 11816428 -108467884 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 675 243 179 0 0 chr13 11817013 11817080 -108467232 + CT-rich Low_complexity Low_complexity 2 68 0 5 675 21 0 0 0 chr13 11817257 11817278 -108467034 + AT_rich Low_complexity Low_complexity 1 21 0 5 675 812 250 40 0 chr13 11817772 11817948 -108466364 - B3A SINE B2 -15 183 1 5 675 562 206 0 18 chr13 11818039 11818158 -108466154 - PB1D9 SINE Alu -1 119 5 5 675 387 0 0 0 chr13 11818281 11818324 -108465988 + (TGG)n Simple_repeat Simple_repeat 2 44 0 5 675 485 295 146 9 chr13 11818755 11818967 -108465345 + Lx8 LINE L1 7036 7276 -197 5 675 972 262 129 16 chr13 11819647 11819957 -108464355 + ORR1E LTR MaLR 11 355 -4 5 675 363 342 81 68 chr13 11820087 11820445 -108463867 + Kanga11a DNA Tc2 169 529 -441 5 675 7872 54 11 6 chr13 11820445 11821399 -108462913 + RLTR13A2 LTR ERVK 1 958 0 5 675 363 342 81 68 chr13 11821399 11821498 -108462814 + Kanga11a DNA Tc2 530 631 -339 5 675 234 0 0 0 chr13 11821631 11821657 -108462655 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 5 675 1047 267 55 4 chr13 11822096 11822352 -108461960 - B4A SINE B4 -20 272 4 5 675 1087 286 70 27 chr13 11823560 11823891 -108460421 + MTD LTR MaLR 61 405 -14 5 675 398 94 0 15 chr13 11824390 11824455 -108459857 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 675 315 71 0 0 chr13 11824455 11824497 -108459815 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 675 253 261 0 0 chr13 11824832 11824897 -108459415 - L1MD2 LINE L1 -23 6336 6272 5 675 391 286 60 99 chr13 11824878 11825243 -108459069 - L1MDa LINE L1 -4290 2343 1993 5 675 439 339 25 30 chr13 11825268 11825466 -108458846 - B3A SINE B2 -1 197 1 5 675 238 240 50 50 chr13 11825472 11825652 -108458660 + (CTCA)n Simple_repeat Simple_repeat 1 180 0 5 675 247 259 62 0 chr13 11825886 11826048 -108458264 + (CTCA)n Simple_repeat Simple_repeat 1 172 0 5 675 437 295 104 41 chr13 11826217 11826512 -108457800 - L1MDa LINE L1 -4692 1941 1622 5 675 1335 163 18 5 chr13 11826512 11826734 -108457578 + URR1A DNA MER1_type 2 226 0 5 675 437 295 104 41 chr13 11826734 11826802 -108457510 - L1MDa LINE L1 -5012 1621 1555 5 675 378 252 219 29 chr13 11826911 11827258 -108457054 - L1MDa LINE L1 -5233 1400 988 5 675 356 268 0 24 chr13 11828532 11828616 -108455696 + ID4_ SINE ID 2 83 0 5 675 678 314 12 12 chr13 11828633 11828804 -108455508 + B3A SINE B2 1 171 -27 5 675 258 32 0 0 chr13 11828816 11828847 -108455465 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 675 225 0 0 0 chr13 11828847 11828871 -108455441 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 675 226 308 0 37 chr13 11829438 11829519 -108454793 + L2c LINE L2 3277 3354 -33 5 675 1397 291 26 26 chr13 11831369 11831831 -108452481 - Lx8 LINE L1 -171 7302 6841 5 675 651 243 132 6 chr13 11832415 11832589 -108451723 + B3A SINE B2 3 198 0 5 675 528 286 8 0 chr13 11832596 11832722 -108451590 + B1_Mur1 SINE Alu 3 129 -20 5 675 226 330 70 26 chr13 11833090 11833205 -108451107 - Lx8 LINE L1 -137 7336 7217 5 675 330 26 0 0 chr13 11833752 11833791 -108450521 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 675 226 240 9 158 chr13 11833864 11833978 -108450334 - B1_Mm SINE Alu -50 97 1 5 675 518 209 44 52 chr13 11833978 11834017 -108450295 - B4 SINE B4 -212 80 43 5 675 218 368 31 21 chr13 11835120 11835217 -108449095 - MIRm SINE MIR -24 252 155 5 675 190 269 0 82 chr13 11835292 11835365 -108448947 - L2 LINE L2 -571 2848 2782 5 675 530 273 5 133 chr13 11837172 11837375 -108446937 + B3 SINE B2 6 182 -34 5 675 313 220 32 21 chr13 11839204 11839297 -108445015 - MIR SINE MIR -65 143 50 5 675 480 291 77 29 chr13 11840068 11840204 -108444108 + B3A SINE B2 20 163 -35 5 675 350 0 44 0 chr13 11840204 11840249 -108444063 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 5 675 480 291 77 29 chr13 11840249 11840282 -108444030 + B3A SINE B2 164 196 -2 5 675 801 75 22 7 chr13 11840383 11840518 -108443794 + (TAGA)n Simple_repeat Simple_repeat 4 140 0 5 675 735 292 18 28 chr13 11840685 11840903 -108443409 + B3 SINE B2 1 216 0 5 675 409 275 18 0 chr13 11841296 11841405 -108442907 + PB1D10 SINE Alu 1 111 -6 5 675 1013 196 20 15 chr13 11841419 11841621 -108442691 + ID_B1 SINE B4 20 222 -2 5 675 443 384 34 5 chr13 11841889 11842093 -108442219 + MER20 DNA MER1_type 6 215 -4 5 675 293 244 89 44 chr13 11842382 11842472 -108441840 + PB1D7 SINE Alu 12 105 -15 5 675 984 294 11 0 chr13 11842473 11842749 -108441563 + B4A SINE B4 10 288 -4 5 675 243 203 0 0 chr13 11842753 11842822 -108441490 + (CA)n Simple_repeat Simple_repeat 1 69 0 5 675 372 22 0 0 chr13 11842864 11842909 -108441403 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 675 1145 271 20 97 chr13 11843327 11843728 -108440584 + MTE2a LTR MaLR 8 377 -2 5 675 568 318 117 0 chr13 11843872 11844180 -108440132 + MER2 DNA MER2_type 1 344 -1 5 675 854 249 29 0 chr13 11845175 11845384 -108438928 + B3 SINE B2 2 216 0 5 675 24 32 0 0 chr13 11845469 11845500 -108438812 + AT_rich Low_complexity Low_complexity 1 31 0 5 675 279 79 0 0 chr13 11845500 11845538 -108438774 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 675 501 178 26 13 chr13 11845553 11845707 -108438605 + (TA)n Simple_repeat Simple_repeat 2 157 0 5 675 709 259 5 15 chr13 11846230 11846430 -108437882 + B3A SINE B2 1 198 0 5 675 573 203 39 8 chr13 11848307 11848436 -108435876 - L1_Rod LINE L1 -90 5757 5625 5 675 776 296 62 58 chr13 11848622 11848913 -108435399 + B4A SINE B4 1 292 0 5 675 24 0 0 51 chr13 11849229 11849248 -108435064 + AT_rich Low_complexity Low_complexity 1 18 0 5 675 690 288 48 10 chr13 11849248 11849455 -108434857 - B3 SINE B2 0 216 2 5 675 24 0 0 51 chr13 11849455 11849474 -108434838 + AT_rich Low_complexity Low_complexity 1 19 0 5 675 310 354 8 45 chr13 11849550 11849683 -108434629 - MER58A DNA MER1_type -96 128 1 5 675 417 265 136 48 chr13 11849881 11850087 -108434225 + B4A SINE B4 1 224 -68 5 675 821 265 154 48 chr13 11850849 11851382 -108432930 - Lx7 LINE L1 -1535 6161 5596 5 675 191 36 36 0 chr13 11851382 11851410 -108432902 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 675 570 291 43 54 chr13 11851410 11851464 -108432848 - Lx7 LINE L1 -686 5605 5549 5 675 857 180 6 0 chr13 11852393 11852565 -108431747 + GA-rich Low_complexity Low_complexity 4 176 0 5 675 438 214 19 19 chr13 11853184 11853289 -108431023 - PB1D10 SINE Alu -1 116 12 5 675 273 248 198 0 chr13 11853185 11853306 -108431006 - B4 SINE B4 -69 223 79 5 675 1692 148 53 0 chr13 11854550 11854854 -108429458 + RMER4A LTR ERVK 147 466 0 5 675 284 344 15 22 chr13 11856099 11856233 -108428079 - RSINE1 SINE B4 -29 136 4 5 675 422 330 36 40 chr13 11857012 11857186 -108427126 - B4A SINE B4 -6 286 108 5 675 4194 42 80 10 chr13 11857186 11857709 -108426603 + LTRIS2 LTR ERV1 5 564 0 5 675 422 330 36 40 chr13 11857709 11857758 -108426554 - B4A SINE B4 -185 107 64 5 675 241 304 70 55 chr13 11857845 11858102 -108426210 + RMER17C LTR ERVK 66 326 -84 5 675 213 283 0 0 chr13 11858130 11858183 -108426129 - B4A SINE B4 -232 60 8 5 675 539 210 76 6 chr13 11858764 11858922 -108425390 + RMER17C LTR ERVK 1 169 -241 5 675 301 367 34 82 chr13 11858996 11859593 -108424719 + L1M4 LINE L1 180 747 -5795 5 675 351 225 33 11 chr13 11859744 11859834 -108424478 + L1M4 LINE L1 1017 1108 -5434 5 675 204 278 28 0 chr13 11860187 11860259 -108424053 + A-rich Low_complexity Low_complexity 4 77 0 5 675 375 333 70 37 chr13 11860336 11860635 -108423677 + L1M4 LINE L1 4158 4466 -2178 5 675 241 360 98 30 chr13 11860804 11861139 -108423173 + Lx8 LINE L1 7106 7463 -10 5 675 216 135 0 0 chr13 11861159 11861196 -108423116 + (A)n Simple_repeat Simple_repeat 1 37 0 5 675 259 245 156 36 chr13 11861563 11861813 -108422499 + L1M4 LINE L1 4798 5077 -1567 5 675 221 284 0 13 chr13 11862305 11862380 -108421932 - ID4_ SINE ID -7 76 3 5 675 279 0 0 0 chr13 11862462 11862493 -108421819 + (TC)n Simple_repeat Simple_repeat 1 31 0 5 675 342 0 0 0 chr13 11862493 11862530 -108421782 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 675 249 291 11 55 chr13 11862552 11862643 -108421669 + B1_Mus1 SINE Alu 11 97 -51 5 675 391 48 32 0 chr13 11863207 11863269 -108421043 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 675 334 312 7 84 chr13 11864402 11864556 -108419756 - RSINE1 SINE B4 -20 145 4 5 675 708 111 0 0 chr13 11865228 11865336 -108418976 + (GA)n Simple_repeat Simple_repeat 1 108 0 5 675 596 252 61 0 chr13 11865349 11865480 -108418832 - B3A SINE B2 -56 142 4 5 675 411 190 94 107 chr13 11865524 11865683 -108418629 - B4A SINE B4 0 292 136 5 675 1028 248 46 39 chr13 11866115 11866295 -108418017 - B4 SINE B4 -4 288 99 5 675 3465 25 5 0 chr13 11866295 11866689 -108417623 + MTA_Mm LTR MaLR 1 396 0 5 675 9579 19 6 0 chr13 11866689 11867781 -108416531 + MTA_Mm-int LTR MaLR 1 1098 0 5 675 3481 35 0 0 chr13 11867781 11868177 -108416135 + MTA_Mm LTR MaLR 1 396 0 5 675 1028 248 46 39 chr13 11868177 11868275 -108416037 - B4 SINE B4 -194 98 8 5 675 414 306 179 36 chr13 11868611 11868835 -108415477 + B4 SINE B4 26 281 -11 5 675 270 0 0 0 chr13 11869368 11869398 -108414914 + (TAGG)n Simple_repeat Simple_repeat 1 30 0 5 675 219 139 0 0 chr13 11869414 11869450 -108414862 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 675 30 27 0 0 chr13 11869450 11869487 -108414825 + AT_rich Low_complexity Low_complexity 1 37 0 5 675 201 39 0 0 chr13 11869567 11869593 -108414719 + (TAAAA)n Simple_repeat Simple_repeat 5 30 0 5 675 323 23 23 0 chr13 11869631 11869675 -108414637 + (TTG)n Simple_repeat Simple_repeat 2 46 0 5 675 21 36 0 0 chr13 11870342 11870370 -108413942 + AT_rich Low_complexity Low_complexity 1 28 0 5 675 319 284 55 115 chr13 11870692 11870875 -108413437 + B4A SINE B4 1 172 -120 5 675 198 0 0 0 chr13 11870939 11870961 -108413351 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 675 382 368 24 51 chr13 11871034 11871326 -108412986 - B4A SINE B4 -6 286 3 5 675 681 272 49 5 chr13 11872038 11872241 -108412071 - B3 SINE B2 0 216 5 5 675 22 0 0 0 chr13 11872243 11872265 -108412047 + AT_rich Low_complexity Low_complexity 1 22 0 5 675 261 0 0 0 chr13 11872266 11872295 -108412017 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 675 596 269 0 30 chr13 11872300 11872434 -108411878 - RSINE1 SINE B4 -28 137 8 5 675 194 338 44 0 chr13 11872824 11872892 -108411420 - L2b LINE L2 -2 3373 3303 6 675 317 289 61 0 chr13 11873950 11874064 -108410248 + MLT2B4 LTR ERVL 9 129 -427 6 675 236 299 31 0 chr13 11874208 11874335 -108409977 + (TCTG)n Simple_repeat Simple_repeat 4 134 0 6 675 296 164 0 15 chr13 11874384 11874452 -108409860 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 675 318 26 0 0 chr13 11874452 11874491 -108409821 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 675 546 247 125 34 chr13 11875538 11875714 -108408598 + B3A SINE B2 7 198 0 6 675 446 0 0 18 chr13 11875833 11875888 -108408424 + (TAA)n Simple_repeat Simple_repeat 1 54 0 6 675 1095 239 39 18 chr13 11875898 11876157 -108408155 + B4A SINE B4 1 265 -27 6 675 219 69 0 0 chr13 11876157 11876186 -108408126 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 675 1095 239 39 18 chr13 11876186 11876207 -108408105 + B4A SINE B4 266 286 -6 6 675 306 322 122 35 chr13 11876291 11876577 -108407735 - MER5C DNA MER1_type 0 313 3 6 675 268 127 18 18 chr13 11877062 11877118 -108407194 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 6 675 341 294 20 0 chr13 11877799 11877813 -108406499 - ID_B1 SINE B4 -12 212 109 6 675 429 182 45 0 chr13 11877813 11877901 -108406411 - B1F SINE Alu -30 119 28 6 675 378 307 0 51 chr13 11879374 11879406 -108404906 + ID_B1 SINE B4 65 214 -10 6 675 480 256 24 8 chr13 11879406 11879532 -108404780 + B1F SINE Alu 12 139 -10 6 675 3777 196 15 12 chr13 11880312 11881032 -108403280 + Lx9 LINE L1 6444 7165 -479 6 675 567 185 170 50 chr13 11881023 11881205 -108403107 + Lx9 LINE L1 7314 7517 -127 6 675 327 203 0 0 chr13 11881205 11881274 -108403038 + (TA)n Simple_repeat Simple_repeat 2 70 0 6 675 249 209 274 11 chr13 11881274 11881358 -108402954 + Lx9 LINE L1 7419 7529 -115 6 675 210 118 0 0 chr13 11881358 11881392 -108402920 + (TA)n Simple_repeat Simple_repeat 2 35 0 6 675 249 209 274 11 chr13 11881392 11881486 -108402826 + Lx9 LINE L1 7530 7643 -1 6 675 429 109 0 0 chr13 11882355 11882419 -108401893 + (A)n Simple_repeat Simple_repeat 1 64 0 6 675 180 125 0 0 chr13 11882776 11882808 -108401504 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 675 1838 150 91 0 chr13 11882852 11883193 -108401119 - RLTR30 LTR ERV1 -1 378 7 6 675 297 0 0 0 chr13 11883739 11883772 -108400540 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 675 288 0 0 0 chr13 11884243 11884275 -108400037 + (TATG)n Simple_repeat Simple_repeat 4 35 0 6 675 694 250 25 18 chr13 11884278 11884441 -108399871 - RSINE1 SINE B4 0 165 2 6 675 1207 35 14 0 chr13 11884685 11884830 -108399482 + B1_Mm SINE Alu 1 147 0 6 675 486 0 0 0 chr13 11884830 11884884 -108399428 + (A)n Simple_repeat Simple_repeat 1 54 0 6 675 1054 290 25 34 chr13 11885280 11885633 -108398679 + ORR1E LTR MaLR 10 359 0 6 675 719 289 8 45 chr13 11887170 11887413 -108396899 + MTEa LTR MaLR 118 351 -28 6 675 26 0 0 0 chr13 11887484 11887510 -108396802 + AT_rich Low_complexity Low_complexity 1 26 0 6 675 843 182 21 0 chr13 11887789 11887932 -108396380 - B1_Mus2 SINE Alu 0 147 2 6 675 2080 176 57 14 chr13 11888410 11888778 -108395534 + ORR1C2 LTR MaLR 1 384 0 6 675 431 256 168 0 chr13 11888810 11888935 -108395377 - RSINE1 SINE B4 -18 147 2 6 675 521 318 132 25 chr13 11890057 11890299 -108394013 + B4 SINE B4 2 269 -23 6 675 360 0 0 0 chr13 11890310 11890350 -108393962 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 675 444 275 215 4 chr13 11892293 11892564 -108391748 + MTEa LTR MaLR 19 346 -33 6 675 324 226 128 11 chr13 11892573 11892667 -108391645 + B3 SINE B2 96 200 -16 6 675 250 248 109 0 chr13 11893682 11893783 -108390529 - L1MA4 LINE L1 -60 6240 6129 6 675 231 209 45 0 chr13 11893952 11894019 -108390293 - L1MA6 LINE L1 -123 6177 6108 6 675 244 245 19 0 chr13 11894614 11894667 -108389645 + RSINE1 SINE B4 6 59 -106 6 675 621 215 106 15 chr13 11894719 11894851 -108389461 + RSINE1 SINE B4 3 146 -19 6 675 525 121 0 0 chr13 11894871 11894954 -108389358 + (CA)n Simple_repeat Simple_repeat 2 84 0 6 675 237 83 0 0 chr13 11895058 11895094 -108389218 + (TCTG)n Simple_repeat Simple_repeat 4 39 0 6 675 241 222 0 69 chr13 11896352 11896410 -108387902 + RSINE1 SINE B4 112 165 0 6 675 200 218 36 0 chr13 11896411 11896466 -108387846 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 675 900 267 0 39 chr13 11897317 11897547 -108386765 + ID_B1 SINE B4 3 223 -1 6 675 22 35 0 0 chr13 11898061 11898090 -108386222 + AT_rich Low_complexity Low_complexity 1 29 0 6 675 325 303 168 36 chr13 11898090 11898227 -108386085 - RSINE1 SINE B4 -8 157 3 6 675 267 164 0 0 chr13 11898672 11898733 -108385579 + (CAAG)n Simple_repeat Simple_repeat 2 62 0 6 675 637 272 7 7 chr13 11898758 11898906 -108385406 - Lx8 LINE L1 -265 7208 7061 6 675 944 183 61 30 chr13 11900403 11900600 -108383712 + URR1A DNA MER1_type 24 226 0 6 675 501 72 36 0 chr13 11900960 11901043 -108383269 + (GA)n Simple_repeat Simple_repeat 2 87 0 6 675 507 196 39 42 chr13 11901043 11901290 -108383022 - RMER17C LTR ERVK -327 482 58 6 675 189 0 0 0 chr13 11901396 11901417 -108382895 + (TTG)n Simple_repeat Simple_repeat 2 22 0 6 675 600 251 57 36 chr13 11901597 11901791 -108382521 + RMER5 LTR ERV1 33 230 -304 6 675 986 160 33 16 chr13 11901793 11902035 -108382277 + RMER17C LTR ERVK 1 246 -164 6 675 766 147 160 31 chr13 11902004 11902206 -108382106 + RMER17C LTR ERVK 86 327 -83 6 675 2989 84 17 39 chr13 11902206 11902615 -108381697 - MTB LTR MaLR 0 400 1 6 675 766 147 160 31 chr13 11902615 11902700 -108381612 + RMER17C LTR ERVK 328 410 0 6 675 881 259 53 11 chr13 11902700 11902962 -108381350 + RMER5 LTR ERV1 228 500 -34 6 675 24 0 0 0 chr13 11903018 11903042 -108381270 + AT_rich Low_complexity Low_complexity 1 24 0 6 675 2776 73 0 27 chr13 11903477 11903844 -108380468 + L1Md_F2 LINE L1 6210 6566 -16 6 675 231 36 0 0 chr13 11903844 11903872 -108380440 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 6 675 479 267 33 16 chr13 11904819 11904941 -108379371 + RSINE1 SINE B4 23 146 -19 6 675 331 325 0 0 chr13 11905754 11905834 -108378478 - B1F1 SINE Alu -68 81 2 6 675 443 287 122 27 chr13 11905874 11906021 -108378291 + RSINE1 SINE B4 5 165 0 6 675 1142 286 68 9 chr13 11906061 11906386 -108377926 + ORR1D2 LTR MaLR 3 346 -24 6 675 508 344 116 18 chr13 11906491 11906716 -108377596 + Tigger5 DNA MER2_type 10 256 -2150 6 675 607 309 45 18 chr13 11906718 11906942 -108377370 + Tigger5 DNA MER2_type 2172 2401 -5 6 675 670 268 269 27 chr13 11907568 11907936 -108376376 + MT2A LTR ERVL 1 457 -76 6 675 315 192 0 0 chr13 11908586 11908664 -108375648 + CT-rich Low_complexity Low_complexity 2 79 0 6 675 447 282 0 0 chr13 11909494 11909597 -108374715 - B3A SINE B2 -94 104 2 6 675 283 257 53 13 chr13 11909790 11909865 -108374447 - L1MC LINE L1 -2116 5766 5689 6 675 947 132 144 21 chr13 11910361 11910555 -108373757 - URR1B DNA MER1_type 0 225 8 6 675 180 339 96 52 chr13 11910690 11910805 -108373507 + L2b LINE L2 3241 3360 -15 6 675 566 347 65 40 chr13 11910824 11911178 -108373134 + MLT1A0 LTR MaLR 1 363 -2 6 675 635 259 35 60 chr13 11911495 11911696 -108372616 - B3A SINE B2 0 198 3 6 675 444 298 135 0 chr13 11912223 11912431 -108371881 - MER2 DNA MER2_type 0 345 110 6 675 193 306 141 10 chr13 11913019 11913118 -108371194 - MIR SINE MIR -67 195 84 6 675 188 200 0 20 chr13 11913727 11913778 -108370534 + GA-rich Low_complexity Low_complexity 2 51 0 6 675 5548 63 10 14 chr13 11913935 11914630 -108369682 - L1Md_F2 LINE L1 -2 6580 5889 6 675 25 31 0 0 chr13 11915410 11915442 -108368870 + AT_rich Low_complexity Low_complexity 1 32 0 6 675 463 162 0 0 chr13 11915819 11915887 -108368425 + tRNA-Lys-AAG tRNA tRNA 9 76 0 6 675 228 340 39 26 chr13 11915872 11916026 -108368286 - RLTR15 LTR ERVK -156 203 48 6 675 486 266 53 0 chr13 11916725 11916838 -108367474 + PB1D7 SINE Alu 2 120 0 6 675 659 90 10 0 chr13 11917858 11917958 -108366354 + (GA)n Simple_repeat Simple_repeat 2 102 0 6 675 640 246 10 109 chr13 11917984 11918185 -108366127 - B3A SINE B2 -16 182 2 6 675 21 0 0 0 chr13 11918199 11918220 -108366092 + AT_rich Low_complexity Low_complexity 1 21 0 6 675 212 263 62 62 chr13 11918430 11918511 -108365801 + ID4 SINE ID 1 81 -2 6 675 831 161 0 2 chr13 11918636 11919107 -108365205 + (TG)n Simple_repeat Simple_repeat 1 470 0 6 675 1011 124 0 0 chr13 11919131 11919308 -108365004 + (TG)n Simple_repeat Simple_repeat 2 178 0 6 675 434 314 150 25 chr13 11920453 11920613 -108363699 + B3A SINE B2 2 181 -17 6 675 451 320 25 68 chr13 11920692 11920927 -108363385 + Lx8 LINE L1 7140 7364 -109 6 675 23 54 0 0 chr13 11921226 11921263 -108363049 + AT_rich Low_complexity Low_complexity 1 37 0 6 675 304 317 14 48 chr13 11922014 11922135 -108362177 + B1F1 SINE Alu 9 126 -23 6 675 282 254 28 0 chr13 11922135 11922206 -108362106 + ID4 SINE ID 1 73 -10 6 675 304 317 14 48 chr13 11922206 11922230 -108362082 + B1F1 SINE Alu 127 149 0 6 675 335 237 9 0 chr13 11922658 11922772 -108361540 + (CA)n Simple_repeat Simple_repeat 2 116 0 6 675 299 254 0 8 chr13 11922788 11922911 -108361401 + (CA)n Simple_repeat Simple_repeat 2 123 0 6 675 510 206 83 9 chr13 11923683 11923791 -108360521 + PB1 SINE Alu 8 123 -4 6 675 241 66 65 16 chr13 11923834 11923896 -108360416 + (TTAA)n Simple_repeat Simple_repeat 1 65 0 6 675 318 317 21 107 chr13 11924014 11924201 -108360111 + MER58B DNA MER1_type 18 188 -153 6 675 282 304 35 18 chr13 11924201 11924315 -108359997 + L1M5 LINE L1 3709 3824 -2322 6 675 32 26 0 0 chr13 11924634 11924673 -108359639 + AT_rich Low_complexity Low_complexity 1 39 0 6 675 239 313 0 98 chr13 11924949 11925041 -108359271 + MTEa LTR MaLR 18 100 -279 6 675 736 203 39 0 chr13 11925381 11925509 -108358803 + B1_Mur2 SINE Alu 1 133 -16 6 675 189 94 0 0 chr13 11925520 11925552 -108358760 + (CAGAGA)n Simple_repeat Simple_repeat 3 34 0 6 675 296 175 0 16 chr13 11925553 11925617 -108358695 + GA-rich Low_complexity Low_complexity 3 65 0 6 675 272 119 17 0 chr13 11925833 11925892 -108358420 + (CAAAAA)n Simple_repeat Simple_repeat 2 61 0 7 675 572 264 88 44 chr13 11926501 11926683 -108357629 - B3A SINE B2 -6 192 3 7 675 396 271 175 58 chr13 11926984 11927121 -108357191 - B3A SINE B2 -16 182 30 7 675 819 247 67 6 chr13 11927148 11927327 -108356985 - B3 SINE B2 -25 191 2 7 84 1020 303 15 29 chr13 11927530 11927802 -108356510 - B4 SINE B4 -7 285 18 7 676 304 347 42 8 chr13 11927910 11928029 -108356283 + B1_Mus2 SINE Alu 2 124 -23 7 676 672 273 62 26 chr13 11928029 11928255 -108356057 + Lx6 LINE L1 7227 7460 0 7 676 239 264 101 28 chr13 11929293 11929402 -108354910 + LTRIS5 LTR ERV1 184 300 -147 7 676 571 233 92 20 chr13 11929619 11929772 -108354540 - B3A SINE B2 -33 165 2 7 676 197 65 32 0 chr13 11931056 11931087 -108353225 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 676 513 341 90 8 chr13 11931131 11931397 -108352915 - B4A SINE B4 -2 290 3 7 676 510 17 0 0 chr13 11931614 11931673 -108352639 + (GA)n Simple_repeat Simple_repeat 1 59 0 7 676 427 279 15 58 chr13 11931793 11931930 -108352382 + B1F SINE Alu 8 138 -11 7 676 523 257 126 37 chr13 11932335 11932525 -108351787 - B3 SINE B2 -5 211 5 7 676 661 242 13 38 chr13 11933034 11933193 -108351119 + RSINE1 SINE B4 11 165 0 7 676 416 221 0 9 chr13 11933195 11933309 -108351003 + (CA)n Simple_repeat Simple_repeat 1 113 0 7 676 221 149 0 41 chr13 11933833 11933882 -108350430 + (CACG)n Simple_repeat Simple_repeat 1 47 0 7 676 782 175 50 10 chr13 11934017 11934207 -108350105 - B2_Mm2 SINE B2 -5 211 4 7 676 771 236 22 22 chr13 11934518 11934700 -108349612 + ID_B1 SINE B4 2 183 -41 7 676 185 132 26 0 chr13 11934706 11934744 -108349568 + GA-rich Low_complexity Low_complexity 5 43 0 7 676 207 0 0 0 chr13 11935348 11935371 -108348941 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 676 521 293 24 16 chr13 11935827 11935952 -108348360 + B1F SINE Alu 3 128 -21 7 676 689 241 136 17 chr13 11936266 11936443 -108347869 + B3A SINE B2 1 198 0 7 676 308 191 179 97 chr13 11937247 11937392 -108346920 + RSINE1 SINE B4 2 158 -7 7 676 438 273 63 51 chr13 11937930 11938088 -108346224 - RSINE1 SINE B4 -4 161 2 7 676 485 272 36 104 chr13 11938670 11938863 -108345449 - B4A SINE B4 -22 270 91 7 676 313 181 66 53 chr13 11939624 11939700 -108344612 - PB1D10 SINE Alu -1 116 40 7 676 247 274 118 69 chr13 11939636 11939738 -108344574 - ID_B1 SINE B4 -9 215 109 7 676 2889 140 10 10 chr13 11940214 11940697 -108343615 + L1_Mur3 LINE L1 2283 2765 -3115 7 676 4858 161 29 39 chr13 11940715 11941695 -108342617 + L1_Mur3 LINE L1 3095 4064 -1816 7 676 5812 209 40 58 chr13 11941692 11943045 -108341267 + Lx7 LINE L1 6368 7696 0 7 676 320 362 70 70 chr13 11944169 11944220 -108340092 + B4A SINE B4 31 217 -75 7 676 771 206 15 0 chr13 11944220 11944356 -108339956 + B1_Mur3 SINE Alu 2 139 -10 7 676 180 0 0 0 chr13 11944356 11944376 -108339936 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 676 846 274 16 16 chr13 11945959 11946148 -108338164 + B3A SINE B2 1 189 -9 7 676 395 230 14 0 chr13 11946819 11946893 -108337419 - B3A SINE B2 -123 75 1 7 676 487 291 97 25 chr13 11947274 11947483 -108336829 - MER20 DNA MER1_type -563 220 1 7 676 275 330 92 0 chr13 11947551 11947660 -108336652 - MER5A DNA MER1_type -67 122 4 7 676 224 286 0 0 chr13 11947686 11947735 -108336577 - MER5B DNA MER1_type -4 174 126 7 676 212 112 73 24 chr13 11947862 11947944 -108336368 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 7 676 544 154 62 17 chr13 11947970 11948268 -108336044 + (TAGA)n Simple_repeat Simple_repeat 1 311 0 7 676 996 210 21 0 chr13 11948360 11948546 -108335766 - B3 SINE B2 0 216 27 7 676 7943 66 5 0 chr13 11948546 11949923 -108334389 - L1_Mus1 LINE L1 0 6567 5185 7 676 265 220 0 0 chr13 11949923 11949973 -108334339 - B3A SINE B2 -148 50 1 7 676 23 33 0 0 chr13 11950002 11950032 -108334280 + AT_rich Low_complexity Low_complexity 1 30 0 7 676 28 0 0 0 chr13 11950180 11950208 -108334104 + AT_rich Low_complexity Low_complexity 1 28 0 7 676 751 236 33 11 chr13 11950301 11950481 -108333831 - MTE2a LTR MaLR 0 379 196 7 676 436 269 9 27 chr13 11950495 11950606 -108333706 + MTE2a LTR MaLR 221 329 -50 7 676 1732 207 58 9 chr13 11950626 11950972 -108333340 + MTC LTR MaLR 1 363 -58 7 676 318 265 0 14 chr13 11951063 11951132 -108333180 - ID4_ SINE ID -14 69 2 7 676 337 304 29 19 chr13 11951160 11951264 -108333048 - B1F SINE Alu -24 125 21 7 676 777 272 35 0 chr13 11952121 11952294 -108332018 - B3A SINE B2 -19 179 1 7 676 404 302 120 125 chr13 11952491 11952616 -108331696 + ORR1E LTR MaLR 3 111 -248 7 676 2977 147 71 37 chr13 11952616 11953126 -108331186 + RLTR11A2 LTR ERVK 1 527 0 7 676 404 302 120 125 chr13 11953126 11953359 -108330953 + ORR1E LTR MaLR 112 359 0 7 676 670 243 3 40 chr13 11953587 11953743 -108330569 + ID_B1 SINE B4 78 220 -72 7 676 431 224 112 0 chr13 11953804 11953920 -108330392 + L1MC LINE L1 4821 4949 -1197 7 676 270 0 0 0 chr13 11956787 11956817 -108327495 + (A)n Simple_repeat Simple_repeat 1 30 0 7 676 4573 109 28 16 chr13 11956820 11957461 -108326851 + Lx2 LINE L1 6349 6997 0 7 676 251 289 40 30 chr13 11957489 11957589 -108326723 + ORR1E LTR MaLR 255 355 -4 7 676 515 302 63 0 chr13 11958033 11958159 -108326153 + RSINE1 SINE B4 15 148 -17 7 676 219 69 0 0 chr13 11958167 11958196 -108326116 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 676 460 291 62 53 chr13 11958228 11958453 -108325859 - ORR1E LTR MaLR -25 334 108 7 676 897 86 0 0 chr13 11958916 11959044 -108325268 + (TCTA)n Simple_repeat Simple_repeat 3 130 0 7 676 270 0 0 0 chr13 11959079 11959109 -108325203 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 676 342 0 0 0 chr13 11960072 11960110 -108324202 + (CACCC)n Simple_repeat Simple_repeat 2 39 0 7 676 278 295 127 37 chr13 11960760 11960894 -108323418 + B4 SINE B4 144 289 -3 7 676 293 237 194 0 chr13 11961617 11961710 -108322602 + PB1D10 SINE Alu 1 111 -6 7 676 1267 279 97 11 chr13 11961787 11962157 -108322155 - MTD LTR MaLR -14 405 4 7 676 1087 273 26 7 chr13 11963488 11963761 -108320551 - B4A SINE B4 -14 278 1 7 676 213 39 0 0 chr13 11963811 11963837 -108320475 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 676 396 59 0 0 chr13 11963860 11963911 -108320401 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 676 450 36 0 0 chr13 11965286 11965342 -108318970 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 676 529 287 132 0 chr13 11965343 11965472 -108318840 - B3A SINE B2 -50 148 3 7 676 307 239 0 33 chr13 11965475 11965566 -108318746 - B4 SINE B4 -203 89 2 7 676 266 324 10 0 chr13 11965808 11965910 -108318402 + Charlie4a DNA MER1_type 383 485 -23 7 676 188 255 78 0 chr13 11965969 11966020 -108318292 - L2a LINE L2 -20 3406 3352 7 676 638 304 0 0 chr13 11966584 11966722 -108317590 + RSINE1 SINE B4 3 140 -25 7 676 275 214 84 63 chr13 11966687 11966782 -108317530 - B3 SINE B2 -119 97 1 7 676 266 273 51 18 chr13 11967779 11967877 -108316435 - MIRc SINE MIR -59 209 114 7 676 356 290 46 9 chr13 11967886 11967994 -108316318 + ID_B1 SINE B4 1 112 -112 7 676 364 312 0 185 chr13 11968681 11968854 -108315458 + B1F SINE Alu 1 141 -8 7 676 237 299 13 0 chr13 11968856 11968933 -108315379 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 7 676 25 31 0 0 chr13 11968978 11969010 -108315302 + AT_rich Low_complexity Low_complexity 1 32 0 7 676 1163 258 54 4 chr13 11970000 11970276 -108314036 - B4 SINE B4 -2 290 1 7 676 780 257 102 41 chr13 11970511 11970828 -108313484 + MTD LTR MaLR 20 386 -14 7 676 316 253 42 67 chr13 11970886 11970974 -108313338 + ID4_ SINE ID 9 91 -61 7 676 355 245 93 19 chr13 11970974 11971082 -108313230 + PB1D10 SINE Alu 1 116 -1 7 676 302 250 45 71 chr13 11971082 11971110 -108313202 + BC1_Mm scRNA scRNA 92 122 -30 7 676 362 248 259 46 chr13 11972673 11972804 -108311508 - RSINE1 SINE B4 -4 161 3 7 676 246 32 0 0 chr13 11973477 11973508 -108310804 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 676 1211 42 14 27 chr13 11973508 11973656 -108310656 - B1_Mm SINE Alu 0 147 2 7 676 347 260 68 0 chr13 11974370 11974443 -108309869 - ID4_ SINE ID 0 83 6 7 676 420 238 0 12 chr13 11974586 11974667 -108309645 - ID4 SINE ID -2 81 2 7 676 657 299 17 51 chr13 11975440 11975733 -108308579 - L1M3 LINE L1 -465 5724 5442 7 676 1189 191 42 0 chr13 11976807 11977022 -108307290 - URR1B DNA MER1_type 0 225 2 7 676 24 0 0 0 chr13 11977288 11977312 -108307000 + AT_rich Low_complexity Low_complexity 1 24 0 7 676 21 57 0 0 chr13 11977384 11977419 -108306893 + AT_rich Low_complexity Low_complexity 1 35 0 7 676 329 0 24 0 chr13 11979463 11979504 -108304808 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 676 356 138 15 0 chr13 11979821 11979886 -108304426 + A-rich Low_complexity Low_complexity 2 67 0 7 676 303 264 122 46 chr13 11979965 11980096 -108304216 + HAL1-3A_ME LINE L1 2284 2424 -434 7 676 1043 221 95 187 chr13 11981833 11982184 -108302128 + ORR1D2 LTR MaLR 5 304 -66 7 676 972 116 0 0 chr13 11982184 11982356 -108301956 + (TC)n Simple_repeat Simple_repeat 2 173 0 7 676 1043 221 95 187 chr13 11982356 11982405 -108301907 + ORR1D2 LTR MaLR 305 367 -3 7 676 784 191 22 0 chr13 11982797 11982933 -108301379 + B1_Mus2 SINE Alu 7 145 -2 7 676 1367 279 62 38 chr13 11984100 11984603 -108299709 + Lx8 LINE L1 6816 7330 -143 7 676 432 0 0 0 chr13 11984615 11984663 -108299649 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 676 223 241 24 0 chr13 11984665 11984748 -108299564 + (TA)n Simple_repeat Simple_repeat 1 85 0 8 676 596 282 119 19 chr13 11985027 11985360 -108298952 + MTD LTR MaLR 1 407 -12 8 676 1009 226 36 18 chr13 11986199 11986475 -108297837 + MTC LTR MaLR 52 419 -2 8 676 297 0 0 0 chr13 11986844 11986877 -108297435 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 676 381 209 145 17 chr13 11986996 11987113 -108297199 + MT2A LTR ERVL 1 132 -401 8 676 229 262 16 16 chr13 11987122 11987184 -108297128 + MT2B2 LTR ERVL 62 123 -478 8 676 533 252 32 0 chr13 11987188 11987371 -108296941 + MT2B2 LTR ERVL 281 513 -71 8 676 253 191 64 0 chr13 11987470 11987517 -108296795 + RSINE1 SINE B4 3 52 -113 8 676 258 32 0 0 chr13 11987806 11987837 -108296475 + (TC)n Simple_repeat Simple_repeat 1 31 0 8 676 387 0 0 0 chr13 11987837 11987879 -108296433 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 676 288 367 80 20 chr13 11988392 11988492 -108295820 + RSINE1 SINE B4 52 157 -8 8 676 180 125 0 0 chr13 11988494 11988526 -108295786 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 676 201 121 0 0 chr13 11988527 11988560 -108295752 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 8 676 2186 110 6 0 chr13 11990089 11990406 -108293906 + ORR1A2 LTR MaLR 1 319 -8 8 676 479 308 17 20 chr13 11990612 11990937 -108293375 + GA-rich Low_complexity Low_complexity 1 324 0 8 676 337 285 4 55 chr13 11990961 11991205 -108293107 + GA-rich Low_complexity Low_complexity 1 231 0 8 676 509 232 0 7 chr13 11991275 11991418 -108292894 + (TATATG)n Simple_repeat Simple_repeat 1 142 0 8 676 746 250 131 52 chr13 11992437 11992865 -108291447 + RMER15 LTR ERVL 27 575 0 8 676 690 13 0 0 chr13 11993349 11993428 -108290884 + (TC)n Simple_repeat Simple_repeat 2 80 0 8 676 3155 62 38 15 chr13 11993588 11993979 -108290333 + MTB LTR MaLR 1 400 0 8 676 1156 79 0 7 chr13 11994111 11994252 -108290060 + B1_Mus2 SINE Alu 1 140 -7 8 676 1249 62 0 0 chr13 11996425 11996571 -108287741 - B1_Mus2 SINE Alu -1 146 1 8 676 961 154 7 7 chr13 11996630 11996774 -108287538 + B1_Mur1 SINE Alu 5 148 -1 8 676 386 183 28 0 chr13 11996914 11996985 -108287327 + B2_Mm2 SINE B2 27 99 -96 8 676 315 105 0 0 chr13 11997021 11997078 -108287234 + (TG)n Simple_repeat Simple_repeat 2 58 0 8 676 225 94 0 0 chr13 11997700 11997732 -108286580 + (A)n Simple_repeat Simple_repeat 1 32 0 8 676 650 263 98 17 chr13 11997897 11998071 -108286241 - ID_B1 SINE B4 -1 223 36 8 676 225 343 0 0 chr13 11999180 11999247 -108285065 + ID4 SINE ID 2 68 -15 8 676 207 0 0 0 chr13 11999269 11999292 -108285020 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 8 676 296 188 14 0 chr13 11999309 11999378 -108284934 + GA-rich Low_complexity Low_complexity 5 74 0 8 676 250 269 45 27 chr13 11999378 11999489 -108284823 - L1MB7 LINE L1 -19 6165 6053 8 676 318 307 139 0 chr13 11999811 11999912 -108284400 - B3 SINE B2 -80 115 1 8 676 472 298 21 0 chr13 12000564 12000705 -108283607 - B3A SINE B2 -16 182 39 1 676 834 267 41 5 chr13 12000748 12000944 -108283368 - B3 SINE B2 -4 212 10 2 676 248 188 14 68 chr13 12002619 12002693 -108281619 + ORR1D2 LTR MaLR 299 368 -2 3 676 40 21 0 0 chr13 12002742 12002789 -108281523 + AT_rich Low_complexity Low_complexity 1 47 0 4 676 1004 226 43 127 chr13 12003529 12003899 -108280413 + MTE2b LTR MaLR 1 339 -40 5 676 1151 82 0 0 chr13 12004070 12004217 -108280095 + B1_Mus2 SINE Alu 1 147 0 6 676 1943 30 30 0 chr13 12004219 12004452 -108279860 + L1_Mus1 LINE L1 6328 6567 0 7 676 21 36 0 0 chr13 12004973 12005001 -108279311 + AT_rich Low_complexity Low_complexity 1 28 0 8 676 301 284 0 0 chr13 12005310 12005377 -108278935 + PB1D7 SINE Alu 1 67 -53 9 676 4815 96 0 0 chr13 12005439 12006098 -108278214 - L1_Mm LINE L1 -2878 3005 2347 1 676 444 328 130 33 chr13 12006217 12006548 -108277764 - Lx9 LINE L1 -141 7503 7141 1 676 690 195 0 8 chr13 12007279 12007408 -108276904 - B1F SINE Alu -8 141 14 1 676 1102 188 23 9 chr13 12008244 12008464 -108275848 - URR1B DNA MER1_type 0 225 3 1 676 618 270 13 0 chr13 12009238 12009390 -108274922 - L1M2 LINE L1 -620 5680 5527 1 676 211 214 0 0 chr13 12010851 12010893 -108273419 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 676 826 152 14 0 chr13 12011252 12011390 -108272922 + B1_Mur3 SINE Alu 3 142 -7 1 676 492 62 0 0 chr13 12011412 12011476 -108272836 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 676 216 0 0 0 chr13 12011476 12011499 -108272813 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 676 677 276 97 6 chr13 12011499 12011674 -108272638 - B3 SINE B2 -25 191 1 1 676 414 253 192 30 chr13 12011674 12011830 -108272482 - B4 SINE B4 -61 231 49 2 676 733 279 57 21 chr13 12013340 12013622 -108270690 - B4A SINE B4 0 292 1 2 676 315 49 0 0 chr13 12014300 12014341 -108269971 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 676 839 260 22 27 chr13 12014369 12014594 -108269718 + ID_B1 SINE B4 1 224 0 2 676 592 307 5 63 chr13 12014740 12014945 -108269367 - B3A SINE B2 -5 193 1 2 676 584 280 32 0 chr13 12015121 12015278 -108269034 + RSINE1 SINE B4 3 164 -1 2 676 360 111 0 0 chr13 12015299 12015353 -108268959 + (TAGG)n Simple_repeat Simple_repeat 1 54 0 2 676 919 217 24 42 chr13 12016225 12016437 -108267875 + B3 SINE B2 9 216 0 2 676 294 193 35 35 chr13 12016512 12016598 -108267714 + (TATATG)n Simple_repeat Simple_repeat 4 89 0 2 676 576 170 0 0 chr13 12016917 12017052 -108267260 + (CA)n Simple_repeat Simple_repeat 2 136 0 2 676 229 329 0 12 chr13 12017971 12018051 -108266261 + GA-rich Low_complexity Low_complexity 4 82 0 3 676 769 254 11 17 chr13 12018127 12018307 -108266005 + B3A SINE B2 2 180 -18 3 676 31 0 0 0 chr13 12018330 12018361 -108265951 + AT_rich Low_complexity Low_complexity 1 31 0 3 676 242 299 37 9 chr13 12018791 12018899 -108265413 + GA-rich Low_complexity Low_complexity 1 111 0 3 676 911 114 17 6 chr13 12019861 12020037 -108264275 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 3 676 460 283 81 6 chr13 12020064 12020224 -108264088 + B3A SINE B2 4 175 -23 3 676 412 175 38 0 chr13 12020222 12020302 -108264010 - B1_Mus2 SINE Alu -63 84 2 3 676 260 267 107 19 chr13 12020302 12020328 -108263984 - ID SINE ID -140 84 50 3 676 264 91 0 0 chr13 12020590 12020634 -108263678 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3 676 360 0 0 0 chr13 12020638 12020678 -108263634 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 676 287 266 99 23 chr13 12020721 12020852 -108263460 + ORR1E LTR MaLR 1 141 -218 4 676 435 342 58 5 chr13 12021082 12021273 -108263039 + MER21B LTR ERV1 639 839 -24 4 676 671 276 42 7 chr13 12021769 12021969 -108262343 + B3A SINE B2 1 207 -9 4 676 993 289 137 8 chr13 12022458 12022984 -108261328 - L1MC1 LINE L1 -284 6049 5456 4 676 1908 208 45 52 chr13 12023095 12023536 -108260776 + Lx8 LINE L1 6909 7346 -127 4 676 294 29 0 0 chr13 12023600 12023635 -108260677 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 676 297 68 0 0 chr13 12023635 12023678 -108260634 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 4 676 330 224 13 0 chr13 12024159 12024235 -108260077 - L1ME1 LINE L1 0 6179 6103 4 676 240 86 0 0 chr13 12024402 12024437 -108259875 + (TTG)n Simple_repeat Simple_repeat 2 36 0 4 676 380 276 117 66 chr13 12024616 12024829 -108259483 - L1ME1 LINE L1 -395 5769 5546 4 676 22 35 0 0 chr13 12025278 12025307 -108259005 + AT_rich Low_complexity Low_complexity 1 29 0 4 676 239 282 9 43 chr13 12025483 12025598 -108258714 + GA-rich Low_complexity Low_complexity 4 114 0 5 676 296 48 0 23 chr13 12025616 12025659 -108258653 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 5 676 638 296 19 0 chr13 12025672 12025878 -108258434 + B4A SINE B4 83 292 0 5 676 589 246 77 0 chr13 12025904 12026087 -108258225 + MER58B DNA MER1_type 142 338 -3 5 676 252 286 123 41 chr13 12026221 12026367 -108257945 + B4A SINE B4 2 159 -133 5 676 2928 134 42 4 chr13 12026373 12026896 -108257416 + RLTR13D6 LTR ERVK 1 543 -359 5 676 2025 37 18 4 chr13 12026869 12027143 -108257169 + RLTR13D6 LTR ERVK 227 504 -302 5 676 5849 130 12 9 chr13 12027150 12028066 -108256246 + Lx2B LINE L1 6075 6993 -7 5 676 240 154 0 0 chr13 12028104 12028156 -108256156 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 676 801 248 138 31 chr13 12028991 12029245 -108255067 - B4 SINE B4 -10 282 2 5 676 1049 197 25 5 chr13 12029846 12030045 -108254267 - B3 SINE B2 -13 203 1 5 676 463 189 0 0 chr13 12030516 12030590 -108253722 - B1_Mur4 SINE Alu -75 75 2 6 676 25 31 0 0 chr13 12030598 12030630 -108253682 + AT_rich Low_complexity Low_complexity 1 32 0 6 676 427 214 15 67 chr13 12030630 12030765 -108253547 - RSINE1 SINE B4 -35 130 3 6 676 366 287 9 0 chr13 12031346 12031454 -108252858 + B4 SINE B4 2 110 -182 6 676 495 245 27 61 chr13 12031461 12031609 -108252703 - B1F SINE Alu 0 149 7 6 676 27 0 0 0 chr13 12031618 12031645 -108252667 + AT_rich Low_complexity Low_complexity 1 27 0 6 676 284 200 62 54 chr13 12031650 12031740 -108252572 + PB1D7 SINE Alu 3 93 -27 6 676 238 250 26 26 chr13 12033563 12033641 -108250671 - B3A SINE B2 -118 80 3 6 676 4974 214 35 13 chr13 12034596 12035607 -108248705 + Lx5 LINE L1 6014 7046 -4 6 676 1010 256 28 46 chr13 12035960 12036242 -108248070 - B4 SINE B4 -14 278 2 6 676 397 245 207 79 chr13 12036353 12036517 -108247795 + B3 SINE B2 19 203 -13 7 676 690 284 19 9 chr13 12036691 12036904 -108247408 + ID_B1 SINE B4 2 216 -8 7 676 1035 213 0 53 chr13 12038371 12038599 -108245713 + B3 SINE B2 1 216 0 7 676 624 331 62 50 chr13 12038603 12038987 -108245325 + MTD LTR MaLR 1 389 -30 7 676 211 207 33 49 chr13 12039640 12039701 -108244611 + MIRb SINE MIR 65 124 -144 7 676 643 294 63 30 chr13 12039885 12040086 -108244226 - B4A SINE B4 -4 288 88 7 676 246 62 0 0 chr13 12040086 12040118 -108244194 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 7 676 643 294 63 30 chr13 12040118 12040186 -108244126 - B4A SINE B4 -205 87 10 7 676 436 221 11 0 chr13 12041644 12041739 -108242573 + ID_B1 SINE B4 90 185 -39 7 676 180 111 0 0 chr13 12043292 12043319 -108240993 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 676 587 182 277 0 chr13 12043661 12043820 -108240492 + ID_B1 SINE B4 22 224 0 7 676 507 33 0 0 chr13 12043822 12043883 -108240429 + (GA)n Simple_repeat Simple_repeat 2 62 0 8 676 196 253 111 33 chr13 12044084 12044174 -108240138 + L2c LINE L2 3072 3168 -219 8 676 287 299 51 10 chr13 12044760 12044858 -108239454 - PB1D7 SINE Alu -17 103 2 8 676 1069 143 153 0 chr13 12045412 12045608 -108238704 + URR1A DNA MER1_type 1 226 0 8 676 32 0 0 0 chr13 12045840 12045872 -108238440 + AT_rich Low_complexity Low_complexity 1 32 0 8 676 185 94 31 0 chr13 12045885 12045917 -108238395 + (TA)n Simple_repeat Simple_repeat 2 34 0 8 676 707 224 13 0 chr13 12045924 12046076 -108238236 - B3A SINE B2 -42 156 3 8 676 961 236 5 5 chr13 12046107 12046316 -108237996 - B3 SINE B2 -7 209 1 8 676 891 258 42 45 chr13 12046490 12046778 -108237534 + B4A SINE B4 3 289 -3 8 676 1107 215 0 5 chr13 12046941 12047151 -108237161 + B3 SINE B2 1 209 -7 8 676 451 264 60 30 chr13 12047320 12047453 -108236859 + RSINE1 SINE B4 6 142 -23 9 676 204 178 22 22 chr13 12047463 12047509 -108236803 + (CCCTA)n Simple_repeat Simple_repeat 5 50 0 9 676 197 65 0 31 chr13 12047520 12047552 -108236760 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 9 676 454 286 119 34 chr13 12047725 12048018 -108236294 - L2a LINE L2 0 3426 3109 9 676 243 321 0 0 chr13 12048107 12048188 -108236124 + ID4_ SINE ID 3 83 0 9 676 212 133 16 48 chr13 12048250 12048313 -108235999 + GA-rich Low_complexity Low_complexity 5 65 0 9 676 622 231 32 11 chr13 12048876 12049064 -108235248 - Tigger6b DNA MER2_type -95 1502 1311 9 676 227 261 92 0 chr13 12049483 12049548 -108234764 - ID_B1 SINE B4 -81 143 73 9 676 1077 293 78 8 chr13 12049858 12050219 -108234093 - MTD LTR MaLR -15 404 19 9 676 583 208 38 15 chr13 12050862 12050994 -108233318 - ID_B1 SINE B4 -7 217 83 9 676 1043 222 154 41 chr13 12051171 12051490 -108232822 + ORR1E LTR MaLR 5 359 0 1 676 729 305 39 14 chr13 12052766 12053049 -108231263 + B4A SINE B4 1 290 -2 1 676 234 128 0 0 chr13 12053072 12053111 -108231201 + (CATA)n Simple_repeat Simple_repeat 4 42 0 1 676 2126 140 0 36 chr13 12053228 12053561 -108230751 + Lx4A LINE L1 6658 6978 -80 1 676 779 212 44 34 chr13 12053938 12054143 -108230169 - ID_B1 SINE B4 -11 213 7 1 676 183 71 71 0 chr13 12056215 12056257 -108228055 + (CTTTG)n Simple_repeat Simple_repeat 3 47 0 1 676 357 125 0 0 chr13 12056258 12056314 -108227998 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 676 222 331 78 52 chr13 12056772 12056963 -108227349 - L2 LINE L2 -455 2964 2769 1 676 615 330 102 22 chr13 12057031 12057626 -108226686 - L2 LINE L2 -782 2637 1995 1 676 894 124 265 22 chr13 12057877 12058058 -108226254 + URR1B DNA MER1_type 1 225 0 1 677 558 308 43 36 chr13 12058837 12059061 -108225251 + B4 SINE B4 1 219 -73 1 677 441 0 0 0 chr13 12059061 12059110 -108225202 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 677 558 308 43 36 chr13 12059110 12059161 -108225151 + B4 SINE B4 220 277 -15 1 677 384 22 0 0 chr13 12059227 12059272 -108225040 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 677 465 242 0 5 chr13 12059388 12059582 -108224730 + (CA)n Simple_repeat Simple_repeat 1 192 0 1 677 2458 157 9 14 chr13 12060408 12060829 -108223483 - Lx5 LINE L1 0 7050 6632 1 677 258 56 0 0 chr13 12061631 12061667 -108222645 + (TA)n Simple_repeat Simple_repeat 2 37 0 1 677 2355 162 47 7 chr13 12064981 12065386 -108218926 + MTC LTR MaLR 1 421 0 1 677 1243 48 0 0 chr13 12066534 12066680 -108217632 + B1_Mm SINE Alu 1 146 -1 1 677 821 256 50 65 chr13 12066707 12067066 -108217246 - MTE2a LTR MaLR -39 380 20 1 677 351 113 0 0 chr13 12067179 12067232 -108217080 + (T)n Simple_repeat Simple_repeat 1 53 0 1 677 1013 277 124 29 chr13 12067416 12067795 -108216517 - MTD LTR MaLR -4 415 1 1 677 299 333 0 0 chr13 12067824 12067905 -108216407 + ID_B1 SINE B4 95 175 -49 1 677 299 347 21 0 chr13 12067905 12067919 -108216393 + PB1D10 SINE Alu 14 110 -7 1 677 227 31 31 0 chr13 12068283 12068315 -108215997 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 677 264 122 0 0 chr13 12068342 12068383 -108215929 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 1 677 714 278 75 8 chr13 12069936 12070185 -108214127 + B4 SINE B4 18 290 -2 1 677 246 206 0 0 chr13 12070448 12070521 -108213791 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 677 234 208 0 0 chr13 12070519 12070572 -108213740 + (ATG)n Simple_repeat Simple_repeat 1 53 0 1 677 205 37 35 69 chr13 12072103 12072161 -108212151 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 1 677 257 283 75 9 chr13 12072350 12072457 -108211855 + PB1D7 SINE Alu 1 114 -6 1 677 2970 32 6 0 chr13 12072542 12072886 -108211426 + ORR1A1 LTR MaLR 1 346 0 1 677 230 244 25 13 chr13 12073319 12073398 -108210914 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 677 239 231 0 0 chr13 12073330 12073382 -108210930 + (CATA)n Simple_repeat Simple_repeat 3 54 0 1 677 321 68 0 0 chr13 12074511 12074555 -108209757 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 677 395 306 116 40 chr13 12074950 12075175 -108209137 - ORR1E LTR MaLR -109 250 9 1 677 1720 180 285 53 chr13 12075520 12076008 -108208304 + MT2B LTR ERVL 1 601 0 1 677 395 295 56 24 chr13 12076494 12076515 -108207797 - RSINE1 SINE B4 -4 161 143 1 677 297 0 0 0 chr13 12076515 12076548 -108207764 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 677 395 295 56 24 chr13 12076548 12076651 -108207661 - RSINE1 SINE B4 -23 142 33 1 677 928 211 340 3 chr13 12076834 12077133 -108207179 + MTD LTR MaLR 20 419 0 1 677 381 43 0 0 chr13 12077812 12077859 -108206453 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 677 38 0 0 0 chr13 12078162 12078200 -108206112 + AT_rich Low_complexity Low_complexity 1 38 0 1 677 231 241 22 54 chr13 12078618 12078710 -108205602 + L1M5 LINE L1 5579 5667 -457 1 677 273 292 85 28 chr13 12078714 12078855 -108205457 + B1F SINE Alu 1 149 0 1 677 327 383 0 0 chr13 12078855 12078975 -108205337 + GA-rich Low_complexity Low_complexity 3 122 0 1 677 751 235 166 17 chr13 12079212 12079557 -108204755 - MTE2b LTR MaLR -20 359 1 1 677 757 243 67 10 chr13 12080145 12080353 -108203959 + ID_B1 SINE B4 5 224 0 1 677 286 194 63 16 chr13 12080409 12080472 -108203840 + ID4_ SINE ID 8 73 -10 1 677 290 210 111 0 chr13 12081472 12081553 -108202759 + L1MA9 LINE L1 6221 6310 -2 1 677 992 224 157 26 chr13 12081568 12081898 -108202414 - MTD LTR MaLR -14 405 46 1 677 229 267 0 74 chr13 12082536 12082617 -108201695 - MLT1A1 LTR MaLR 0 408 334 1 677 656 121 52 12 chr13 12083411 12083671 -108200641 + (TG)n Simple_repeat Simple_repeat 1 270 0 1 677 513 164 8 17 chr13 12083685 12083803 -108200509 + (TA)n Simple_repeat Simple_repeat 2 118 0 1 677 251 151 19 19 chr13 12083809 12083863 -108200449 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 677 692 114 54 6 chr13 12083878 12084046 -108200266 + (TG)n Simple_repeat Simple_repeat 1 176 0 1 677 564 260 83 19 chr13 12084051 12084136 -108200176 - B4A SINE B4 0 292 207 1 677 674 34 11 0 chr13 12084136 12084225 -108200087 + (TC)n Simple_repeat Simple_repeat 1 90 0 1 677 564 260 83 19 chr13 12084225 12084296 -108200016 - B4A SINE B4 -86 206 127 1 677 186 43 0 0 chr13 12084345 12084368 -108199944 + (CATTT)n Simple_repeat Simple_repeat 4 26 0 1 677 605 262 77 27 chr13 12084595 12084815 -108199497 - Lx8 LINE L1 -64 7409 7179 1 677 543 151 155 17 chr13 12084953 12085099 -108199213 + B2_Mm2 SINE B2 1 159 -57 1 677 270 81 0 0 chr13 12085118 12085155 -108199157 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 677 360 0 0 0 chr13 12085155 12085195 -108199117 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 677 520 243 205 0 chr13 12085284 12085469 -108198843 + ID_B1 SINE B4 1 223 -1 1 677 251 188 0 36 chr13 12086409 12086492 -108197820 + A-rich Low_complexity Low_complexity 1 80 0 1 677 407 253 201 58 chr13 12086617 12086909 -108197403 + MER44B DNA MER2_type 8 396 -154 1 677 246 191 0 0 chr13 12086892 12086934 -108197378 + MTE2a LTR MaLR 9 50 -329 1 677 414 0 0 0 chr13 12087724 12087770 -108196542 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 677 721 278 126 35 chr13 12087776 12088030 -108196282 + B4A SINE B4 16 292 0 1 677 1712 11 5 0 chr13 12088238 12088429 -108195883 + B2_Mm1a SINE B2 2 193 0 1 677 300 53 0 0 chr13 12088429 12088467 -108195845 + (A)n Simple_repeat Simple_repeat 1 38 0 1 677 351 305 105 16 chr13 12089420 12089610 -108194702 - B4A SINE B4 -56 236 30 1 677 659 247 14 112 chr13 12089824 12090038 -108194274 + B3A SINE B2 1 193 -5 1 677 264 212 94 66 chr13 12090157 12090263 -108194049 + L1MB2 LINE L1 4714 4822 -1318 1 677 370 237 262 1 chr13 12090409 12090591 -108193721 + L1MB2 LINE L1 5154 5376 -770 1 677 980 242 36 24 chr13 12090626 12090876 -108193436 + ORR1E LTR MaLR 101 353 -6 1 677 421 302 86 12 chr13 12090892 12091137 -108193175 + L1MB2 LINE L1 5380 5642 -670 1 677 678 325 65 3 chr13 12091179 12091468 -108192844 - MLT1A0 LTR MaLR -56 309 1 1 677 244 293 61 0 chr13 12091476 12091575 -108192737 + L1MB2 LINE L1 5643 5747 -433 1 677 353 329 23 23 chr13 12091587 12091764 -108192548 + (CATA)n Simple_repeat Simple_repeat 4 180 0 1 677 289 289 94 26 chr13 12091941 12092133 -108192179 + L1MB2 LINE L1 5875 6079 -92 1 677 317 323 110 23 chr13 12092199 12092462 -108191850 + B4A SINE B4 1 286 -6 1 677 1498 219 97 3 chr13 12092892 12093263 -108191049 - MTD LTR MaLR -4 415 10 1 677 462 341 15 0 chr13 12093702 12093837 -108190475 + B4 SINE B4 4 140 -152 1 677 806 10 20 0 chr13 12095482 12095580 -108188732 + (TCTCCC)n Simple_repeat Simple_repeat 5 104 0 1 677 601 321 75 64 chr13 12095844 12096124 -108188188 + B4A SINE B4 6 288 -4 1 677 483 63 0 0 chr13 12096320 12096383 -108187929 + (GGGA)n Simple_repeat Simple_repeat 4 66 0 1 677 200 180 39 20 chr13 12097060 12097111 -108187201 + (CCCA)n Simple_repeat Simple_repeat 3 54 0 1 677 286 174 67 173 chr13 12097866 12097970 -108186342 + PB1D10 SINE Alu 21 113 -4 1 677 708 199 87 43 chr13 12099077 12099261 -108185051 - Lx8 LINE L1 -1114 6359 6168 1 677 272 222 0 0 chr13 12099261 12099324 -108184988 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 677 1204 41 7 0 chr13 12099452 12099598 -108184714 - B1_Mus2 SINE Alu 0 147 1 1 677 360 233 189 30 chr13 12099891 12100055 -108184257 - RMER15 LTR ERVL -40 535 346 1 677 540 247 87 35 chr13 12100354 12100526 -108183786 - L1MA4 LINE L1 -377 5923 5743 1 677 274 291 0 12 chr13 12100766 12100846 -108183466 + ID4_ SINE ID 2 80 -3 1 677 291 114 57 0 chr13 12101029 12101099 -108183213 + (TATAA)n Simple_repeat Simple_repeat 2 75 0 1 677 1334 260 68 79 chr13 12102044 12102552 -108181760 + Lx8 LINE L1 6932 7439 -34 1 677 481 252 0 56 chr13 12102552 12102678 -108181634 + PB1D9 SINE Alu 2 120 0 1 677 1334 260 68 79 chr13 12102678 12102715 -108181597 + Lx8 LINE L1 7440 7471 -2 1 677 757 258 119 63 chr13 12104696 12105031 -108179281 + ORR1E LTR MaLR 1 354 -5 1 677 192 258 0 0 chr13 12105527 12105624 -108178688 + (CA)n Simple_repeat Simple_repeat 2 98 0 1 677 317 210 144 3 chr13 12106101 12106224 -108178088 + ID_B1 SINE B4 5 141 -151 1 677 470 224 29 13 chr13 12106672 12106780 -108177532 - B1F1 SINE Alu -39 110 5 1 677 342 0 0 0 chr13 12106837 12106875 -108177437 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 677 813 297 5 5 chr13 12106875 12107088 -108177224 - B3 SINE B2 -3 213 1 1 677 387 300 9 18 chr13 12107658 12107770 -108176542 - PB1D10 SINE Alu -1 116 6 1 677 505 255 35 7 chr13 12107994 12108136 -108176176 + RSINE1 SINE B4 20 165 0 1 677 362 30 29 43 chr13 12109204 12109274 -108175038 + (CAAAAA)n Simple_repeat Simple_repeat 3 71 0 1 677 272 315 87 30 chr13 12109553 12109799 -108174513 + Lx8 LINE L1 7143 7411 -62 1 677 413 122 14 0 chr13 12110128 12110202 -108174110 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 2 677 383 320 58 19 chr13 12111428 12111584 -108172728 + Lx8 LINE L1 7178 7339 -134 2 677 261 139 0 0 chr13 12111584 12111627 -108172685 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 2 677 23 0 0 0 chr13 12111706 12111729 -108172583 + AT_rich Low_complexity Low_complexity 1 23 0 2 677 518 286 59 41 chr13 12112403 12112622 -108171690 - RMER15 LTR ERVL -17 558 336 2 677 456 339 0 0 chr13 12113023 12113138 -108171174 - B3A SINE B2 -36 162 48 2 677 2128 81 18 158 chr13 12113209 12113589 -108170723 - ORR1A2 LTR MaLR 0 327 1 2 677 385 273 34 88 chr13 12114071 12114276 -108170036 + Charlie1a DNA MER1_type 1228 1421 -34 2 677 477 47 0 0 chr13 12114477 12114541 -108169771 + (TG)n Simple_repeat Simple_repeat 1 64 0 2 677 609 154 146 0 chr13 12114541 12114664 -108169648 - B3A SINE B2 -57 141 1 2 677 523 280 57 41 chr13 12115103 12115416 -108168896 + L1MA6 LINE L1 5943 6251 -49 2 677 522 216 17 0 chr13 12115416 12115532 -108168780 + PB1D9 SINE Alu 1 118 -2 2 677 289 311 36 76 chr13 12115532 12115562 -108168750 + L1MA6 LINE L1 6243 6268 -23 2 677 783 199 189 24 chr13 12116217 12116423 -108167889 + Lx2B LINE L1 6756 6995 -5 2 677 446 350 117 25 chr13 12117224 12117505 -108166807 + Lx8 LINE L1 7167 7473 0 2 677 1837 237 42 81 chr13 12117913 12118454 -108165858 - RMER5 LTR ERV1 -2 532 13 2 677 331 277 116 16 chr13 12118942 12119063 -108165249 + MER103 DNA DNA 18 150 -16 2 677 275 67 100 11 chr13 12119079 12119169 -108165143 + (TA)n Simple_repeat Simple_repeat 1 98 0 2 677 530 226 13 76 chr13 12120314 12120472 -108163840 + RSINE1 SINE B4 18 165 0 2 677 594 299 101 91 chr13 12122661 12122765 -108161547 + B4A SINE B4 3 103 -189 2 677 1857 133 70 123 chr13 12122765 12123219 -108161093 + RLTR23 LTR ERV1 1 430 0 2 677 594 294 73 77 chr13 12123219 12123419 -108160893 + B4A SINE B4 83 292 0 2 677 572 153 71 24 chr13 12123542 12123669 -108160643 - MTD LTR MaLR -15 404 272 2 677 480 254 105 0 chr13 12124242 12124356 -108159956 + B1F2 SINE Alu 11 136 -13 2 677 369 0 0 0 chr13 12124356 12124397 -108159915 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 2 677 911 238 35 0 chr13 12124466 12124668 -108159644 + B3 SINE B2 1 209 -7 2 677 308 273 172 15 chr13 12124696 12124830 -108159482 + RSINE1 SINE B4 2 156 -9 2 677 464 100 12 0 chr13 12124928 12125008 -108159304 + (TC)n Simple_repeat Simple_repeat 1 81 0 2 677 183 80 0 0 chr13 12126704 12126729 -108157583 + (T)n Simple_repeat Simple_repeat 1 25 0 2 677 5853 50 19 0 chr13 12126732 12127449 -108156863 - L1_Mus1 LINE L1 0 6567 5837 2 677 5972 81 1 12 chr13 12127449 12128250 -108156062 + L1_Mus1 LINE L1 5061 5852 -31 2 677 301 315 53 18 chr13 12128552 12128665 -108155647 - RSINE1 SINE B4 -45 120 4 2 677 1729 252 131 13 chr13 12129068 12129602 -108154710 + MER67C LTR ERV1 115 711 0 2 677 337 361 29 34 chr13 12129933 12130142 -108154170 + B4A SINE B4 83 290 -2 2 677 1088 234 66 46 chr13 12130795 12131100 -108153212 + MTEa LTR MaLR 4 314 -65 2 677 279 157 0 0 chr13 12131397 12131448 -108152864 + CT-rich Low_complexity Low_complexity 2 52 0 2 677 396 59 0 0 chr13 12131461 12131512 -108152800 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 677 940 292 26 45 chr13 12131580 12131599 -108152713 - B4 SINE B4 -6 286 268 2 677 348 83 0 0 chr13 12131599 12131647 -108152665 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 677 940 292 26 45 chr13 12131647 12131896 -108152416 - B4 SINE B4 -25 267 25 2 677 192 273 0 0 chr13 12132142 12132208 -108152104 + (CAT)n Simple_repeat Simple_repeat 2 67 0 2 677 231 286 0 0 chr13 12132272 12132328 -108151984 - L3 LINE CR1 -882 3607 3552 2 677 207 0 0 0 chr13 12133066 12133089 -108151223 + (A)n Simple_repeat Simple_repeat 1 23 0 2 677 474 18 0 0 chr13 12133324 12133379 -108150933 + (GA)n Simple_repeat Simple_repeat 1 55 0 2 677 187 331 110 24 chr13 12133584 12133711 -108150601 - MIRc SINE MIR -127 141 4 2 677 1055 281 46 25 chr13 12134084 12134187 -108150125 + B4 SINE B4 1 106 -186 2 677 2243 164 92 21 chr13 12134187 12134711 -108149601 + RLTR31_Mm LTR ERVK 1 561 0 2 677 1055 281 46 25 chr13 12134711 12134891 -108149421 + B4 SINE B4 107 290 -2 2 677 857 299 126 31 chr13 12135530 12135879 -108148433 - MLT1B LTR MaLR -8 382 1 2 677 683 258 25 75 chr13 12136211 12136412 -108147900 - B3A SINE B2 0 198 8 2 677 242 127 36 18 chr13 12136654 12136710 -108147602 - L1MB2 LINE L1 0 6171 6115 2 677 520 310 31 19 chr13 12137524 12137685 -108146627 + RSINE1 SINE B4 2 164 -1 2 677 1251 145 92 0 chr13 12137816 12138023 -108146289 - URR1A DNA MER1_type 0 226 1 2 677 322 296 0 0 chr13 12138525 12138623 -108145689 - PB1D10 SINE Alu -19 98 1 2 677 293 248 209 0 chr13 12138752 12138857 -108145455 + MLT2B4 LTR ERVL 4 130 -426 2 677 180 125 0 0 chr13 12138868 12138900 -108145412 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 677 301 225 0 12 chr13 12139089 12139170 -108145142 + CT-rich Low_complexity Low_complexity 1 80 0 2 677 219 281 9 94 chr13 12139251 12139357 -108144955 + RSINE1 SINE B4 4 100 -65 2 677 671 205 121 33 chr13 12139582 12139764 -108144548 + B3A SINE B2 1 198 0 2 677 413 77 0 0 chr13 12140686 12140738 -108143574 - ORR1A4 LTR MaLR 0 329 278 2 677 8087 52 10 1 chr13 12140783 12141995 -108142317 - L1_Mus2 LINE L1 0 6566 5345 2 677 1906 85 20 76 chr13 12141997 12142301 -108142011 - ORR1A4 LTR MaLR -42 287 1 2 677 619 294 66 93 chr13 12142299 12142663 -108141649 + ORR1E LTR MaLR 1 354 -5 2 677 21 0 0 0 chr13 12143116 12143137 -108141175 + AT_rich Low_complexity Low_complexity 1 21 0 2 677 353 285 45 15 chr13 12143175 12143307 -108141005 - B1F SINE Alu -12 137 2 2 677 891 94 0 0 chr13 12143333 12143460 -108140852 + (GTCTG)n Simple_repeat Simple_repeat 4 130 0 2 677 898 148 0 0 chr13 12143460 12143595 -108140717 - B1_Mus1 SINE Alu -3 145 11 2 677 22 0 0 0 chr13 12143833 12143855 -108140457 + AT_rich Low_complexity Low_complexity 1 22 0 2 677 896 231 38 24 chr13 12143904 12144117 -108140195 + ID_B1 SINE B4 3 218 -6 2 677 207 0 0 0 chr13 12144160 12144183 -108140129 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 2 677 860 257 132 35 chr13 12144537 12144848 -108139464 + MTD LTR MaLR 66 406 -13 2 677 559 263 27 0 chr13 12145756 12145927 -108138385 - MTEa LTR MaLR -2 377 173 2 677 580 43 0 64 chr13 12145933 12146058 -108138254 + (GGTTG)n Simple_repeat Simple_repeat 4 120 0 2 677 688 308 43 0 chr13 12146058 12146243 -108138069 - MTEa LTR MaLR -184 195 3 2 677 588 274 22 0 chr13 12147315 12147450 -108136862 + MER5A DNA MER1_type 34 171 -18 2 677 483 252 102 18 chr13 12147735 12147901 -108136411 + RMER15 LTR ERVL 351 530 -45 2 677 181 227 159 0 chr13 12148476 12148520 -108135792 + L4 LINE RTE 1227 1277 -752 2 677 565 203 8 41 chr13 12148783 12148906 -108135406 + PB1D7 SINE Alu 1 119 -1 2 677 770 270 80 15 chr13 12148990 12149264 -108135048 + B4A SINE B4 1 292 0 2 677 38 61 0 0 chr13 12149327 12149393 -108134919 + AT_rich Low_complexity Low_complexity 1 66 0 2 677 953 237 89 51 chr13 12150890 12151206 -108133106 + ORR1E LTR MaLR 32 359 0 2 677 986 279 125 12 chr13 12151251 12151392 -108132920 - MTEa LTR MaLR -3 376 235 2 677 267 31 0 0 chr13 12151392 12151424 -108132888 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 677 986 279 125 12 chr13 12151424 12151619 -108132693 - MTEa LTR MaLR -145 234 3 2 677 395 191 98 33 chr13 12151922 12152014 -108132298 + B3A SINE B2 1 98 -100 2 677 1593 235 137 26 chr13 12152021 12152519 -108131793 + RMER4B LTR ERVK 17 569 -16 2 677 317 62 21 0 chr13 12152526 12152574 -108131738 + (CATA)n Simple_repeat Simple_repeat 2 50 0 2 677 373 269 0 21 chr13 12152578 12152673 -108131639 + B3A SINE B2 90 182 -16 2 677 456 200 0 0 chr13 12152676 12152771 -108131541 + (CA)n Simple_repeat Simple_repeat 2 96 0 2 677 466 311 130 20 chr13 12152787 12152987 -108131325 + MLT1A0 LTR MaLR 143 364 -1 2 677 188 329 14 0 chr13 12153666 12153736 -108130576 + MIRm SINE MIR 194 264 -12 2 677 557 288 31 25 chr13 12155062 12155222 -108129090 + RSINE1 SINE B4 5 165 0 2 677 480 18 0 0 chr13 12155511 12155568 -108128744 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 677 795 228 137 5 chr13 12155581 12155771 -108128541 + B3 SINE B2 2 216 0 2 677 1708 103 94 14 chr13 12156214 12156354 -108127958 - RMER19A LTR ERVK 0 737 600 2 677 210 71 0 0 chr13 12156354 12156382 -108127930 + (GGATG)n Simple_repeat Simple_repeat 4 31 0 2 677 1708 103 94 14 chr13 12156382 12156527 -108127785 - RMER19A LTR ERVK -138 599 429 2 677 3239 143 36 9 chr13 12156531 12157055 -108127257 - MurERV4_19-int LTR ERVK -5242 538 1 2 677 243 0 0 0 chr13 12157066 12157093 -108127219 + (T)n Simple_repeat Simple_repeat 1 27 0 2 677 1955 98 29 48 chr13 12157125 12157437 -108126875 + RMER19A LTR ERVK 432 737 0 2 677 283 262 37 24 chr13 12157906 12157988 -108126324 + ID4 SINE ID 1 83 0 2 677 302 263 21 10 chr13 12158228 12158324 -108125988 + (TG)n Simple_repeat Simple_repeat 2 98 0 2 677 1078 228 150 12 chr13 12159452 12159785 -108124527 + MTEa LTR MaLR 1 379 0 2 677 2966 78 30 30 chr13 12160309 12160716 -108123596 + MTB_Mm LTR MaLR 1 407 0 2 677 916 234 73 10 chr13 12161002 12161291 -108123021 - L1MA7 LINE L1 -268 6023 5717 2 677 555 264 48 74 chr13 12161308 12161537 -108122775 + L1MA9 LINE L1 6090 6312 0 2 677 523 270 145 5 chr13 12161597 12161783 -108122529 - B3 SINE B2 0 216 5 2 677 804 264 11 17 chr13 12162267 12162444 -108121868 - B3A SINE B2 -22 176 1 2 677 243 0 0 0 chr13 12162809 12162836 -108121476 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 677 829 256 108 0 chr13 12163376 12163571 -108120741 + B4A SINE B4 1 216 -76 2 677 980 251 116 58 chr13 12163583 12163929 -108120383 + MTB LTR MaLR 20 385 -15 3 677 511 296 47 0 chr13 12163971 12164140 -108120172 + B3A SINE B2 4 180 -18 3 677 320 268 0 24 chr13 12164158 12164242 -108120070 + B4A SINE B4 211 292 0 2 677 256 246 18 0 chr13 12164244 12164301 -108120011 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 677 370 270 47 155 chr13 12166108 12166340 -108117972 - MTEa LTR MaLR -35 324 118 3 677 1545 27 26 31 chr13 12166361 12166554 -108117758 + B2_Mm1t SINE B2 2 193 0 3 677 432 255 29 0 chr13 12166742 12166844 -108117468 + PB1D10 SINE Alu 4 108 -9 3 677 4294 153 64 26 chr13 12167173 12167936 -108116376 + RMER1A Other Other 239 1030 0 3 677 1185 43 7 0 chr13 12168034 12168174 -108116138 + B1_Mus1 SINE Alu 2 142 -6 3 677 593 61 12 0 chr13 12168176 12168258 -108116054 + (GAAAA)n Simple_repeat Simple_repeat 2 84 0 3 677 861 298 30 53 chr13 12168280 12168546 -108115766 + B4A SINE B4 13 272 -20 3 677 366 115 0 0 chr13 12168559 12168620 -108115692 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 677 307 276 10 31 chr13 12168644 12168741 -108115571 + B1_Mus2 SINE Alu 1 95 -52 3 677 1765 164 230 3 chr13 12169447 12169790 -108114522 - MTC LTR MaLR 0 421 1 3 677 1341 285 65 18 chr13 12169944 12170390 -108113922 + Lx8 LINE L1 6891 7357 -116 3 677 818 233 45 41 chr13 12170392 12170625 -108113687 - MT2B LTR ERVL 0 601 242 3 677 548 196 20 0 chr13 12170640 12170742 -108113570 - MTEa LTR MaLR -274 105 2 3 677 572 278 186 27 chr13 12171465 12171798 -108112514 + MLT1B LTR MaLR 5 390 0 3 677 1204 258 19 29 chr13 12171806 12172117 -108112195 + MTE2b LTR MaLR 61 368 -11 3 677 23 0 0 0 chr13 12172482 12172505 -108111807 + AT_rich Low_complexity Low_complexity 1 23 0 3 677 328 261 57 90 chr13 12173947 12174124 -108110188 + MTEb LTR MaLR 3 173 -206 3 677 416 148 0 9 chr13 12174189 12174230 -108110082 + polypyrimidine Low_complexity Low_complexity 69 109 0 3 677 917 111 0 11 chr13 12174230 12174412 -108109900 + (TC)n Simple_repeat Simple_repeat 1 180 0 3 677 416 148 0 9 chr13 12174412 12174479 -108109833 + CT-rich Low_complexity Low_complexity 2 68 0 3 677 810 140 0 0 chr13 12174482 12174661 -108109651 + (TC)n Simple_repeat Simple_repeat 2 180 0 3 677 473 230 96 124 chr13 12174696 12174905 -108109407 + MTEb LTR MaLR 164 366 -12 3 677 862 164 0 0 chr13 12175120 12175260 -108109052 + B1_Mur2 SINE Alu 2 141 -8 3 677 494 323 18 42 chr13 12175287 12175455 -108108857 + B4A SINE B4 24 187 -105 3 677 504 32 0 0 chr13 12175477 12175539 -108108773 + (GA)n Simple_repeat Simple_repeat 2 63 0 3 677 261 0 0 0 chr13 12176428 12176457 -108107855 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 3 677 644 191 17 12 chr13 12176835 12176979 -108107333 + B3A SINE B2 34 169 -47 3 677 410 299 76 6 chr13 12176959 12176998 -108107314 + B4 SINE B4 43 92 -200 3 677 221 373 35 50 chr13 12176998 12177139 -108107173 + B1_Mur2 SINE Alu 1 139 -10 3 677 243 0 0 0 chr13 12177182 12177209 -108107103 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 677 210 129 0 0 chr13 12177238 12177269 -108107043 + (GGGAGA)n Simple_repeat Simple_repeat 3 33 0 3 677 551 118 0 19 chr13 12177269 12177373 -108106939 + (CAGAGA)n Simple_repeat Simple_repeat 2 103 0 3 677 605 268 88 40 chr13 12178079 12178394 -108105918 - MTEa LTR MaLR -2 417 26 3 677 302 348 7 48 chr13 12178273 12178418 -108105894 - MT2A LTR ERVL -393 140 2 3 677 392 295 81 18 chr13 12178528 12178749 -108105563 + L1MD LINE L1 5060 5294 -852 3 677 577 250 36 19 chr13 12178750 12178906 -108105406 + B3A SINE B2 21 183 -15 3 677 228 238 0 0 chr13 12178936 12178978 -108105334 + polypurine Low_complexity Low_complexity 1 42 0 3 677 577 296 49 42 chr13 12178982 12179246 -108105066 + L1MD LINE L1 5319 5584 -658 3 677 938 221 97 35 chr13 12179301 12179559 -108104753 + B4 SINE B4 5 278 -14 3 677 23 0 0 0 chr13 12179597 12179620 -108104692 + AT_rich Low_complexity Low_complexity 1 23 0 3 677 459 288 164 0 chr13 12179922 12180068 -108104244 - B3 SINE B2 0 216 47 3 677 1910 165 9 59 chr13 12180072 12180497 -108103815 + RMER17C LTR ERVK 7 410 0 3 677 285 106 64 0 chr13 12180499 12180546 -108103766 - B3A SINE B2 -147 51 2 3 677 667 293 152 38 chr13 12180616 12180932 -108103380 - MLT1A0 LTR MaLR -2 363 12 3 677 435 306 139 28 chr13 12181309 12181733 -108102579 + L1M5 LINE L1 4373 4843 -1303 3 677 585 218 109 0 chr13 12181934 12182081 -108102231 + RSINE1 SINE B4 3 165 0 3 677 352 280 65 0 chr13 12182193 12182286 -108102026 - Lx7 LINE L1 -559 7137 7039 3 677 382 261 75 69 chr13 12182394 12182567 -108101745 - MTEa LTR MaLR -6 373 200 3 677 528 197 4 11 chr13 12182694 12182805 -108101507 + B1_Mur1 SINE Alu 33 139 -10 3 677 297 0 0 0 chr13 12182805 12182838 -108101474 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3 677 461 285 44 0 chr13 12182943 12183080 -108101232 + B1F SINE Alu 1 143 -6 3 677 201 256 0 0 chr13 12183080 12183123 -108101189 + GA-rich Low_complexity Low_complexity 1 43 0 3 677 1047 294 22 53 chr13 12183476 12183892 -108100420 - MTD LTR MaLR -16 403 1 3 677 988 287 22 11 chr13 12184689 12184960 -108099352 - B4A SINE B4 -18 274 1 3 677 725 259 103 15 chr13 12185529 12185733 -108098579 + Lx8 LINE L1 7088 7309 -164 3 677 400 320 31 39 chr13 12185913 12186139 -108098173 + B4A SINE B4 2 292 0 3 677 943 235 62 68 chr13 12186388 12186680 -108097632 + B4 SINE B4 3 292 0 3 677 1045 225 162 29 chr13 12186826 12187141 -108097171 + ORR1E LTR MaLR 1 357 -2 3 677 524 322 150 67 chr13 12188305 12188678 -108095634 - MLT1C LTR MaLR -14 453 50 3 677 279 348 35 42 chr13 12188955 12189099 -108095213 - LTR33 LTR ERVL -4 511 369 3 677 261 0 0 0 chr13 12189117 12189146 -108095166 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 3 678 353 220 17 34 chr13 12189860 12190039 -108094273 + GA-rich Low_complexity Low_complexity 1 176 0 3 678 240 333 17 66 chr13 12190042 12190254 -108094058 + MIR3 SINE MIR 2 195 -67 3 678 406 255 194 19 chr13 12191457 12191617 -108092695 - ORR1E LTR MaLR -168 191 4 3 678 997 280 58 25 chr13 12191827 12192045 -108092267 + B4 SINE B4 43 269 -23 3 678 306 0 0 0 chr13 12192045 12192079 -108092233 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 678 997 280 58 25 chr13 12192079 12192102 -108092210 + B4 SINE B4 270 292 0 3 678 394 270 118 26 chr13 12192923 12193075 -108091237 + MLT1A0 LTR MaLR 3 168 -197 3 678 628 272 0 16 chr13 12194891 12195018 -108089294 + RSINE1 SINE B4 4 128 -37 3 678 525 156 0 0 chr13 12195072 12195168 -108089144 + (CA)n Simple_repeat Simple_repeat 2 97 0 3 678 693 260 26 13 chr13 12195961 12196117 -108088195 + ID_B1 SINE B4 35 192 -32 3 678 21 0 0 0 chr13 12196117 12196138 -108088174 + AT_rich Low_complexity Low_complexity 1 21 0 3 678 238 299 87 9 chr13 12196159 12196249 -108088063 + B1F2 SINE Alu 1 90 -27 3 678 351 0 0 0 chr13 12196563 12196602 -108087710 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 678 435 63 0 0 chr13 12197766 12197829 -108086483 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 678 659 71 10 0 chr13 12197943 12198041 -108086271 + (CA)n Simple_repeat Simple_repeat 1 99 0 3 678 213 108 0 0 chr13 12198777 12198814 -108085498 + (CTG)n Simple_repeat Simple_repeat 2 38 0 3 678 23 68 0 0 chr13 12198970 12199014 -108085298 + GC_rich Low_complexity Low_complexity 1 44 0 3 678 23 33 0 0 chr13 12199145 12199175 -108085137 + GC_rich Low_complexity Low_complexity 1 30 0 3 678 642 233 92 10 chr13 12199611 12199806 -108084506 + B3 SINE B2 1 211 -5 3 678 596 229 76 0 chr13 12200117 12200261 -108084051 + RSINE1 SINE B4 5 159 -6 3 678 475 240 98 77 chr13 12201117 12201352 -108082960 - Lx9 LINE L1 -4 7640 7401 3 678 285 29 0 0 chr13 12201357 12201391 -108082921 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 678 414 0 0 0 chr13 12201415 12201461 -108082851 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 678 308 311 75 28 chr13 12201696 12201802 -108082510 - PB1D10 SINE Alu -1 116 6 3 678 341 167 19 19 chr13 12201826 12201930 -108082382 + (TATG)n Simple_repeat Simple_repeat 2 105 0 3 678 641 288 44 32 chr13 12201930 12202088 -108082224 - RSINE1 SINE B4 0 165 6 3 678 389 288 48 7 chr13 12202457 12202604 -108081708 - HAL1-2a_MD LINE L1 -516 2508 2356 3 678 216 250 198 16 chr13 12202689 12202815 -108081497 - MIRc SINE MIR -113 155 3 3 678 715 257 45 45 chr13 12203708 12203928 -108080384 - MER2 DNA MER2_type -22 323 104 3 678 427 250 116 0 chr13 12203928 12204040 -108080272 - RMER15 LTR ERVL 0 575 451 3 678 630 252 7 0 chr13 12204065 12204200 -108080112 - B1_Mur3 SINE Alu 0 149 14 3 678 1633 229 126 10 chr13 12204207 12204596 -108079716 - RMER15 LTR ERVL -115 460 27 3 678 336 24 0 0 chr13 12205017 12205058 -108079254 + (TGG)n Simple_repeat Simple_repeat 1 41 0 3 678 220 111 44 0 chr13 12205999 12206044 -108078268 + (TATG)n Simple_repeat Simple_repeat 2 48 0 3 678 181 350 49 21 chr13 12206547 12206690 -108077622 + L2 LINE L2 2320 2466 -953 3 678 507 69 0 0 chr13 12207647 12207719 -108076593 + (TGGA)n Simple_repeat Simple_repeat 2 73 0 3 678 832 244 79 25 chr13 12207808 12208010 -108076302 - ID_B1 SINE B4 0 224 12 3 678 477 260 7 64 chr13 12208900 12209040 -108075272 - MTEa LTR MaLR -242 137 6 3 678 201 247 21 53 chr13 12209371 12209392 -108074920 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 3 678 1195 41 0 26 chr13 12209392 12209543 -108074769 + B1_Mm SINE Alu 1 147 0 3 678 201 247 21 53 chr13 12209543 12209615 -108074697 + (CAAA)n Simple_repeat Simple_repeat 1 71 0 3 678 273 119 0 0 chr13 12209616 12209658 -108074654 + (TCC)n Simple_repeat Simple_repeat 3 44 0 3 678 1030 261 91 62 chr13 12209870 12210209 -108074103 - ORR1E LTR MaLR -10 349 1 4 678 2054 217 72 19 chr13 12210359 12210791 -108073521 + Lx5 LINE L1 6591 7045 -5 4 678 3348 31 0 0 chr13 12210797 12211182 -108073130 + L1Md_F2 LINE L1 5202 5586 -297 4 678 8190 43 4 6 chr13 12211182 12212179 -108072133 + L1Md_F2 LINE L1 5587 6581 -1 4 678 246 255 0 0 chr13 12212236 12212287 -108072025 + B1F SINE Alu 99 149 0 4 678 724 317 39 86 chr13 12212949 12213311 -108071001 - ORR1E LTR MaLR -14 345 1 4 678 1395 276 88 40 chr13 12213612 12214136 -108070176 + Lx8 LINE L1 6855 7403 -70 4 678 502 230 176 29 chr13 12214152 12214322 -108069990 + Lx9 LINE L1 6640 6834 -810 4 678 1679 249 32 40 chr13 12214336 12214834 -108069478 + Lx9 LINE L1 7027 7520 -124 4 678 435 158 0 126 chr13 12214840 12214999 -108069313 + Lx9 LINE L1 7458 7596 -48 4 678 25 0 0 0 chr13 12215012 12215037 -108069275 + AT_rich Low_complexity Low_complexity 1 25 0 4 678 242 312 16 0 chr13 12215674 12215738 -108068574 - MLT1B LTR MaLR -54 336 272 4 678 2792 75 67 0 chr13 12215997 12216372 -108067940 - MTB LTR MaLR 0 400 1 4 678 423 0 0 0 chr13 12216420 12216467 -108067845 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 678 2050 135 51 6 chr13 12216469 12216805 -108067507 + ORR1B2 LTR MaLR 9 359 -8 4 678 240 312 0 31 chr13 12216906 12217002 -108067310 + (CATATA)n Simple_repeat Simple_repeat 3 95 0 4 678 507 318 90 98 chr13 12217754 12218110 -108066202 + MTEa LTR MaLR 22 374 -5 4 678 588 268 65 30 chr13 12218214 12218476 -108065836 - L1MB8 LINE L1 -206 5972 5702 4 678 259 239 97 121 chr13 12218530 12218654 -108065658 + MTEa LTR MaLR 3 123 -256 4 678 298 257 128 10 chr13 12218689 12218791 -108065521 + MTEa LTR MaLR 254 367 -12 4 678 3962 127 3 5 chr13 12219603 12220179 -108064133 - Lx LINE L1 -20 6634 6060 4 678 24 0 0 0 chr13 12220648 12220672 -108063640 + AT_rich Low_complexity Low_complexity 1 24 0 4 678 369 0 0 0 chr13 12220850 12220891 -108063421 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 678 628 216 52 0 chr13 12221137 12221271 -108063041 + B4A SINE B4 149 289 -3 4 678 342 0 0 0 chr13 12223133 12223171 -108061141 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 678 186 43 0 0 chr13 12223171 12223193 -108061119 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 678 353 200 130 22 chr13 12223218 12223310 -108061002 + B4 SINE B4 183 284 -8 4 678 503 304 60 68 chr13 12223913 12224249 -108060063 - ORR1E LTR MaLR -26 333 1 4 678 271 345 0 22 chr13 12225208 12225300 -108059012 + B4A SINE B4 122 211 -81 4 678 266 349 9 19 chr13 12225436 12225544 -108058768 + B4A SINE B4 184 290 -2 4 678 708 261 43 66 chr13 12226261 12226519 -108057793 + MTEa LTR MaLR 1 252 -127 4 678 610 321 30 92 chr13 12226563 12226834 -108057478 + B4A SINE B4 5 258 -34 4 678 216 97 0 0 chr13 12226843 12226874 -108057438 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 678 254 29 0 28 chr13 12226920 12226956 -108057356 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 678 322 272 22 39 chr13 12227250 12227430 -108056882 + (TATG)n Simple_repeat Simple_repeat 4 180 0 4 678 331 286 9 9 chr13 12227450 12227609 -108056703 + (TG)n Simple_repeat Simple_repeat 1 159 0 4 678 406 322 159 26 chr13 12227938 12228187 -108056125 + HAL1 LINE L1 735 1019 -1488 4 678 7446 54 6 0 chr13 12228187 12229075 -108055237 + RLTR13B1 LTR ERVK 1 893 0 4 678 406 322 159 26 chr13 12229075 12229252 -108055060 + HAL1 LINE L1 1020 1218 -1289 4 678 239 265 34 96 chr13 12229423 12229569 -108054743 + HAL1 LINE L1 1540 1676 -831 4 678 2850 53 3 3 chr13 12229761 12230140 -108054172 + RLTR13A2 LTR ERVK 580 958 0 4 678 297 216 13 39 chr13 12231051 12231128 -108053184 + CT-rich Low_complexity Low_complexity 3 77 0 4 678 542 298 51 54 chr13 12231448 12231877 -108052435 + HAL1 LINE L1 1952 2379 -128 4 678 1074 240 171 8 chr13 12232240 12232595 -108051717 - MTD LTR MaLR -6 413 1 4 678 26 0 0 0 chr13 12232841 12232867 -108051445 + AT_rich Low_complexity Low_complexity 1 26 0 4 678 4969 116 36 1 chr13 12232867 12233625 -108050687 - Lx4A LINE L1 -2 7056 6273 4 678 1064 228 45 92 chr13 12233645 12233959 -108050353 + MTEa LTR MaLR 4 302 -77 4 678 888 281 61 7 chr13 12234444 12234741 -108049571 + MER2 DNA MER2_type 3 315 -30 4 678 361 268 0 0 chr13 12234751 12234833 -108049479 - RMER30 DNA MER1_type -114 88 7 4 678 977 282 46 11 chr13 12235197 12235477 -108048835 + B4 SINE B4 1 290 -2 4 678 282 159 0 0 chr13 12235506 12235575 -108048737 + GA-rich Low_complexity Low_complexity 2 70 0 4 678 267 282 135 15 chr13 12236233 12236366 -108047946 + B4A SINE B4 3 151 -141 4 678 287 246 27 14 chr13 12236386 12236460 -108047852 + B4A SINE B4 196 270 -22 4 678 1132 43 43 0 chr13 12236615 12236756 -108047556 + B1_Mus1 SINE Alu 2 148 0 4 678 230 56 28 0 chr13 12236788 12236824 -108047488 + (TC)n Simple_repeat Simple_repeat 2 38 0 4 678 2034 110 9 51 chr13 12237170 12237506 -108046806 - RLTRETN_Mm LTR ERVK 0 322 1 4 678 276 289 0 0 chr13 12237514 12237597 -108046715 - BC1_Mm scRNA scRNA -69 83 1 4 678 379 280 140 16 chr13 12238147 12238459 -108045853 - L1MC LINE L1 -763 5581 5223 4 678 1083 149 69 49 chr13 12238465 12238712 -108045600 - Lx7 LINE L1 -1 7695 7444 4 678 225 154 0 0 chr13 12238714 12238753 -108045559 + A-rich Low_complexity Low_complexity 1 39 0 4 678 962 252 75 37 chr13 12238874 12239249 -108045063 - L1MC LINE L1 -1219 4927 4539 4 678 686 294 39 10 chr13 12239939 12240006 -108044306 + B4 SINE B4 10 81 -211 4 678 189 0 0 0 chr13 12240006 12240027 -108044285 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 678 686 294 39 10 chr13 12240027 12240162 -108044150 + B4 SINE B4 82 218 -74 4 678 23 0 0 0 chr13 12240200 12240223 -108044089 + AT_rich Low_complexity Low_complexity 1 23 0 4 678 1191 61 0 13 chr13 12240262 12240411 -108043901 - B1_Mm SINE Alu 0 147 1 4 678 230 152 0 0 chr13 12240521 12240567 -108043745 + B4 SINE B4 247 292 0 4 678 479 99 22 0 chr13 12240570 12240661 -108043651 + (CAGA)n Simple_repeat Simple_repeat 4 96 0 4 678 195 42 0 0 chr13 12240663 12240687 -108043625 + (CAGAGA)n Simple_repeat Simple_repeat 1 24 0 4 678 1209 254 66 30 chr13 12241614 12241980 -108042332 + MTEa LTR MaLR 1 379 0 4 678 591 200 0 25 chr13 12242037 12242155 -108042157 + PB1D9 SINE Alu 1 115 -5 4 678 468 0 0 0 chr13 12242257 12242309 -108042003 + (TTCC)n Simple_repeat Simple_repeat 4 55 0 4 678 759 244 84 10 chr13 12242366 12242569 -108041743 + ID_B1 SINE B4 2 219 -5 4 678 300 299 0 44 chr13 12242866 12242957 -108041355 - PB1 SINE Alu -35 92 6 4 678 276 387 16 0 chr13 12243674 12243798 -108040514 + MIRb SINE MIR 26 151 -117 4 678 278 122 0 39 chr13 12243893 12243944 -108040368 - B4A SINE B4 -63 229 181 4 678 728 282 61 61 chr13 12244413 12244772 -108039540 + ORR1E LTR MaLR 1 359 0 4 678 689 290 121 8 chr13 12245305 12245562 -108038750 + B4 SINE B4 2 287 -5 4 678 911 295 98 7 chr13 12246568 12246917 -108037395 - RMER1B Other Other -580 762 65 4 678 421 289 26 68 chr13 12247110 12247165 -108037147 - B1F SINE Alu -11 136 93 4 678 881 239 179 36 chr13 12247165 12247495 -108036817 - MTE2a LTR MaLR -2 377 1 4 678 421 279 31 62 chr13 12247495 12247585 -108036727 - B1F SINE Alu -55 94 1 4 678 229 310 68 45 chr13 12247585 12247613 -108036699 - B4 SINE B4 -207 85 56 4 678 278 282 90 9 chr13 12248178 12248289 -108036023 - Lx8 LINE L1 0 7473 7354 4 678 375 290 46 9 chr13 12248472 12248580 -108035732 - RMER20B LTR ERVK -43 584 473 4 678 223 49 49 0 chr13 12248718 12248759 -108035553 + (CCCCCA)n Simple_repeat Simple_repeat 6 48 0 4 678 333 299 91 29 chr13 12248795 12248837 -108035475 - RMER20B LTR ERVK -226 416 373 4 678 180 0 0 0 chr13 12248837 12248857 -108035455 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 4 678 378 299 91 29 chr13 12248857 12249024 -108035288 - RMER20B LTR ERVK -270 372 194 4 678 263 224 0 0 chr13 12249175 12249224 -108035088 - Lx8 LINE L1 -256 7217 7169 4 678 631 243 51 93 chr13 12249232 12249468 -108034844 - B4A SINE B4 -66 226 1 4 678 379 263 59 15 chr13 12249483 12249618 -108034694 + MLT1B LTR MaLR 3 143 -247 4 678 496 129 42 31 chr13 12249610 12249706 -108034606 + PB1D7 SINE Alu 24 120 0 4 678 655 276 93 18 chr13 12249692 12249917 -108034395 + MLT1B LTR MaLR 108 349 -41 4 678 472 68 14 14 chr13 12250114 12250188 -108034124 + (GGA)n Simple_repeat Simple_repeat 2 75 0 4 678 569 211 6 96 chr13 12251000 12251157 -108033155 + B3A SINE B2 1 143 -55 4 678 244 206 0 60 chr13 12251996 12252085 -108032227 + CT-rich Low_complexity Low_complexity 1 83 0 4 678 657 294 79 44 chr13 12252657 12252860 -108031452 + B3A SINE B2 2 211 -5 4 678 279 0 0 0 chr13 12252861 12252892 -108031420 + (CATA)n Simple_repeat Simple_repeat 3 33 0 4 678 293 68 0 22 chr13 12252989 12253034 -108031278 + (GAAA)n Simple_repeat Simple_repeat 2 45 0 4 678 336 307 12 56 chr13 12253353 12253522 -108030790 + MIRb SINE MIR 32 198 -70 4 678 647 331 102 59 chr13 12253973 12254416 -108029896 - MT2A LTR ERVL -71 462 1 4 678 253 204 0 0 chr13 12254760 12254814 -108029498 - B1F SINE Alu -59 90 37 4 678 2516 261 29 68 chr13 12254854 12255867 -108028445 - L1_Rod LINE L1 -277 5570 4598 4 678 1223 211 31 12 chr13 12255885 12256168 -108028144 + Lx9 LINE L1 5588 5910 -1734 4 678 696 268 70 52 chr13 12256370 12256642 -108027670 - ORR1E LTR MaLR -78 281 5 4 678 348 24 0 0 chr13 12256642 12256683 -108027629 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 678 820 149 67 0 chr13 12256719 12256853 -108027459 - B1_Mur3 SINE Alu -6 143 1 4 678 350 260 51 20 chr13 12257131 12257229 -108027083 - PB1D10 SINE Alu -8 109 9 4 678 325 336 137 0 chr13 12257150 12257296 -108027016 - ID_B1 SINE B4 -56 168 3 4 678 396 251 69 17 chr13 12257454 12257636 -108026676 - L1MA4 LINE L1 -185 5971 5783 4 678 460 185 9 9 chr13 12257637 12257746 -108026566 + (TA)n Simple_repeat Simple_repeat 2 110 0 4 678 707 313 4 8 chr13 12257767 12258015 -108026297 - L1MA4 LINE L1 -585 5715 5469 4 678 251 325 53 0 chr13 12258020 12258134 -108026178 - Zaphod DNA Tip100 -3776 255 136 4 678 582 86 0 0 chr13 12258165 12258246 -108026066 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 678 820 242 57 19 chr13 12258303 12258514 -108025798 + ID_B1 SINE B4 1 219 -5 5 678 180 0 0 0 chr13 12258542 12258562 -108025750 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 5 678 260 53 68 51 chr13 12259209 12259268 -108025044 + MamRep1161 DNA TcMar 45 104 -853 5 678 685 258 107 10 chr13 12259488 12259684 -108024628 + B3 SINE B2 2 216 0 5 678 864 235 11 0 chr13 12259688 12259871 -108024441 + B3 SINE B2 2 186 -30 5 678 269 207 17 17 chr13 12260178 12260237 -108024075 - RSINE1 SINE B4 -6 159 101 5 678 324 222 102 8 chr13 12260354 12260481 -108023831 - MT2A LTR ERVL -296 237 99 5 678 424 274 10 0 chr13 12260496 12260598 -108023714 + B1_Mus1 SINE Alu 2 104 -44 5 678 412 40 0 62 chr13 12260598 12260678 -108023634 + (GGAA)n Simple_repeat Simple_repeat 2 76 0 5 678 644 179 0 16 chr13 12260691 12260816 -108023496 - MT2A LTR ERVL -410 123 1 5 678 303 177 190 40 chr13 12261199 12261299 -108023013 - MER57A-int LTR ERV1 -275 5912 5798 5 678 219 233 0 0 chr13 12261708 12261751 -108022561 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 678 484 193 8 26 chr13 12262052 12262169 -108022143 + MTD LTR MaLR 9 123 -296 5 678 554 131 30 20 chr13 12262181 12262282 -108022030 - B1_Mur4 SINE Alu -6 144 43 5 678 414 215 0 0 chr13 12262291 12262421 -108021891 + CT-rich Low_complexity Low_complexity 2 131 0 5 678 319 155 33 33 chr13 12262463 12262523 -108021789 - B1_Mur4 SINE Alu -90 60 1 5 678 687 228 205 16 chr13 12262523 12262775 -108021537 + MTD LTR MaLR 120 419 0 5 678 2932 190 50 6 chr13 12263224 12263770 -108020542 + Lx6 LINE L1 6776 7345 -115 5 678 285 0 67 0 chr13 12264050 12264095 -108020217 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 5 678 183 80 0 0 chr13 12264458 12264483 -108019829 + (A)n Simple_repeat Simple_repeat 1 25 0 5 678 33 43 0 0 chr13 12265433 12265480 -108018832 + AT_rich Low_complexity Low_complexity 1 47 0 5 678 1226 41 0 0 chr13 12265586 12265732 -108018580 - B1_Mus2 SINE Alu 0 147 2 5 678 263 311 15 15 chr13 12265934 12266068 -108018244 - MamRep434 DNA TcMar -152 274 141 5 678 1207 225 145 0 chr13 12267246 12267584 -108016728 + MTD LTR MaLR 1 387 -32 5 678 503 249 132 9 chr13 12267607 12267834 -108016478 - L1ME3 LINE L1 -184 5978 5724 5 678 313 257 0 75 chr13 12268023 12268103 -108016209 - B1F1 SINE Alu 0 149 76 5 678 564 224 91 58 chr13 12268190 12268398 -108015914 - Tigger1 DNA MER2_type -245 2173 1959 5 678 474 137 10 19 chr13 12268631 12268642 -108015670 + polypyrimidine Low_complexity Low_complexity 93 103 0 5 678 3630 158 41 34 chr13 12268642 12269325 -108014987 - RLTR17 LTR ERVK 0 692 5 5 678 474 137 10 19 chr13 12269325 12269417 -108014895 + CT-rich Low_complexity Low_complexity 2 92 0 5 678 730 277 78 18 chr13 12269528 12269811 -108014501 - Tigger1 DNA MER2_type -720 1698 1399 5 678 274 275 88 0 chr13 12270037 12270117 -108014195 - PB1D7 SINE Alu -10 110 24 5 678 485 312 0 60 chr13 12270321 12270471 -108013841 - B3A SINE B2 -1 197 57 5 678 229 337 40 55 chr13 12272127 12272328 -108011984 - Tigger14a DNA MER2_type -33 291 94 5 678 381 22 0 0 chr13 12272831 12272877 -108011435 + (TTCC)n Simple_repeat Simple_repeat 2 47 0 5 678 988 224 19 10 chr13 12272961 12273168 -108011144 - B3 SINE B2 -6 210 2 5 678 606 150 71 0 chr13 12273413 12273526 -108010786 - B1_Mus2 SINE Alu -26 121 1 5 678 1214 305 127 31 chr13 12273919 12274470 -108009842 + Tigger7 DNA MER2_type 2 605 -1886 5 678 232 268 0 0 chr13 12275320 12275376 -108008936 - L1M5 LINE L1 -376 5864 5809 5 678 365 247 72 0 chr13 12276856 12276953 -108007359 - RSINE1 SINE B4 -61 104 1 5 678 346 243 91 27 chr13 12276954 12277064 -108007248 - B1F SINE Alu 0 117 1 5 678 258 282 0 120 chr13 12277064 12277095 -108007217 - ID SINE ID -145 79 64 5 678 267 284 12 12 chr13 12277344 12277426 -108006886 + GA-rich Low_complexity Low_complexity 3 84 0 5 678 184 370 126 14 chr13 12278069 12278283 -108006029 - MIRb SINE MIR -4 264 27 5 678 222 37 0 0 chr13 12278853 12278880 -108005432 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 5 678 212 29 86 0 chr13 12279125 12279160 -108005152 + (CAGGG)n Simple_repeat Simple_repeat 5 42 0 5 678 864 122 0 0 chr13 12279584 12279748 -108004564 + (TG)n Simple_repeat Simple_repeat 2 165 0 5 678 198 0 0 0 chr13 12279862 12279884 -108004428 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 678 846 123 0 0 chr13 12279928 12280090 -108004222 + (TG)n Simple_repeat Simple_repeat 2 163 0 5 678 198 0 0 0 chr13 12280204 12280226 -108004086 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 678 8033 65 58 2 chr13 12283048 12284134 -108000178 + Lx3_Mus LINE L1 5863 7009 0 5 678 519 17 0 0 chr13 12288050 12288110 -107996202 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 678 375 23 0 0 chr13 12288110 12288153 -107996159 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 678 242 264 10 81 chr13 12289281 12289380 -107994932 - MIR3 SINE MIR -112 96 5 5 678 342 181 133 0 chr13 12291017 12291115 -107993197 - PB1D10 SINE Alu -8 109 5 5 678 376 295 108 0 chr13 12291469 12291598 -107992714 + RSINE1 SINE B4 2 144 -21 5 678 239 267 37 74 chr13 12293045 12293126 -107991186 + ID2 SINE ID 3 80 -3 5 678 332 295 0 13 chr13 12293557 12293636 -107990676 + RSINE1 SINE B4 1 78 -87 5 678 243 262 133 19 chr13 12293634 12293739 -107990573 + RSINE1 SINE B4 27 143 -22 5 678 882 167 0 0 chr13 12293964 12294185 -107990127 + (CA)n Simple_repeat Simple_repeat 1 221 0 5 678 25 0 0 0 chr13 12294226 12294251 -107990061 + AT_rich Low_complexity Low_complexity 1 25 0 5 678 1665 42 0 0 chr13 12294589 12294782 -107989530 + B2_Mm1a SINE B2 1 193 0 5 678 385 197 109 43 chr13 12295162 12295300 -107989012 + B1F1 SINE Alu 3 149 0 5 678 327 268 0 0 chr13 12295300 12295397 -107988915 + A-rich Low_complexity Low_complexity 1 97 0 5 678 314 175 23 70 chr13 12295409 12295495 -107988817 + ID2 SINE ID 2 83 0 5 678 646 272 127 47 chr13 12295907 12296246 -107988066 + MLT2D LTR ERVL 1 366 -48 5 678 180 0 0 0 chr13 12296301 12296321 -107987991 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 678 450 0 0 0 chr13 12296658 12296708 -107987604 + (CAAAA)n Simple_repeat Simple_repeat 4 53 0 5 678 496 263 65 7 chr13 12298755 12298908 -107985404 + B3A SINE B2 1 162 -36 5 678 288 130 0 0 chr13 12298980 12299026 -107985286 + (TTTTC)n Simple_repeat Simple_repeat 2 47 0 5 678 1103 88 0 7 chr13 12299026 12299174 -107985138 - B1_Mus1 SINE Alu 0 148 2 5 678 1405 76 27 0 chr13 12299225 12299409 -107984903 + B2_Mm1a SINE B2 1 189 -4 5 678 1424 70 32 0 chr13 12299420 12299606 -107984706 + B2_Mm2 SINE B2 2 193 -2 5 678 329 259 83 90 chr13 12299709 12299853 -107984459 + B1F SINE Alu 4 146 -3 5 678 216 232 99 59 chr13 12300982 12301083 -107983229 - L2 LINE L2 -1159 2260 2156 5 678 265 173 0 0 chr13 12301654 12301706 -107982606 + PB1D10 SINE Alu 65 116 -1 5 678 510 273 52 20 chr13 12301776 12301929 -107982383 + RSINE1 SINE B4 5 162 -3 5 678 806 228 107 30 chr13 12302149 12302411 -107981901 + L1MA4 LINE L1 5738 6019 -281 5 678 533 163 3 50 chr13 12302856 12302982 -107981330 + MT2A LTR ERVL 114 196 -337 5 678 770 203 88 10 chr13 12303841 12304035 -107980277 + MT2A LTR ERVL 1 209 -324 5 678 356 227 140 0 chr13 12304095 12304245 -107980067 + MT2A LTR ERVL 353 523 -10 5 678 369 0 0 0 chr13 12304519 12304560 -107979752 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 5 678 1264 27 0 0 chr13 12305407 12305554 -107978758 + B1_Mus2 SINE Alu 1 147 0 5 678 7487 136 70 70 chr13 12305844 12306167 -107978145 - RLTR21 LTR ERVK 0 1572 1197 5 678 234 91 0 0 chr13 12306167 12306200 -107978112 + (CATA)n Simple_repeat Simple_repeat 2 34 0 5 678 7487 136 70 70 chr13 12306200 12307448 -107976864 - RLTR21 LTR ERVK -376 1196 1 5 678 547 217 0 0 chr13 12308241 12308347 -107975965 + PB1D9 SINE Alu 6 111 -9 5 678 439 16 0 45 chr13 12308348 12308414 -107975898 + (TAAA)n Simple_repeat Simple_repeat 3 65 0 5 678 197 33 0 32 chr13 12308513 12308544 -107975768 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 678 445 239 18 18 chr13 12309494 12309605 -107974707 + PB1D10 SINE Alu 1 111 -6 5 678 317 325 57 24 chr13 12309976 12310099 -107974213 + RSINE1 SINE B4 7 133 -32 5 678 211 319 0 55 chr13 12310921 12310994 -107973318 + ID4_ SINE ID 1 69 -14 5 678 189 0 0 0 chr13 12310995 12311016 -107973296 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 678 3189 216 142 11 chr13 12311054 12311844 -107972468 + Lx7 LINE L1 6443 7335 -361 5 678 1469 159 11 22 chr13 12311844 12312120 -107972192 + RMER3D-int LTR ERVK 1271 1543 -1299 5 678 659 194 28 28 chr13 12312146 12312289 -107972023 + RMER3D-int LTR ERVK 1539 1681 -1161 5 678 1722 188 52 43 chr13 12312289 12312728 -107971584 + RLTR31_Mur LTR ERVK 111 553 0 5 678 2455 58 28 0 chr13 12312818 12313143 -107971169 + Lx3_Mus LINE L1 6676 7009 0 5 678 341 279 30 30 chr13 12313173 12313306 -107971006 + Lx7 LINE L1 7564 7696 0 5 678 250 197 93 68 chr13 12313909 12314007 -107970305 - MER58A DNA MER1_type -79 145 43 5 678 367 308 114 31 chr13 12314141 12314396 -107969916 - B4 SINE B4 -16 276 1 5 678 470 273 20 7 chr13 12315231 12315382 -107968930 + MMAR1 DNA Mariner 1 153 -1133 5 678 696 238 12 0 chr13 12315378 12315538 -107968774 + MMAR1 DNA Mariner 971 1132 -154 5 678 518 252 0 47 chr13 12315602 12315731 -107968581 - RSINE1 SINE B4 -40 125 3 5 678 381 133 60 12 chr13 12315740 12315824 -107968488 + MMAR1 DNA Mariner 1131 1218 -68 5 678 428 158 11 58 chr13 12315847 12315934 -107968378 + B1_Mus2 SINE Alu 59 141 -6 5 678 251 265 23 35 chr13 12316151 12316237 -107968075 + PB1D10 SINE Alu 33 117 0 5 678 268 188 116 0 chr13 12316385 12316454 -107967858 + MER82 DNA MER2_type 116 192 -461 5 678 450 246 107 112 chr13 12316454 12316651 -107967661 + B3A SINE B2 3 198 0 5 678 784 268 60 11 chr13 12316657 12316925 -107967387 + MER82 DNA MER2_type 177 457 -196 5 678 1505 117 32 16 chr13 12317298 12317550 -107966762 + L1Md_A LINE L1 6315 6570 -12 5 678 25 0 0 0 chr13 12317550 12317575 -107966737 + AT_rich Low_complexity Low_complexity 1 25 0 6 678 455 183 21 41 chr13 12318451 12318548 -107965764 + PB1D9 SINE Alu 25 119 -1 6 678 302 285 273 0 chr13 12318548 12318713 -107965599 + B3 SINE B2 4 213 -3 6 678 889 234 86 25 chr13 12319119 12319280 -107965032 + ORR1D1 LTR MaLR 67 231 -143 6 678 1076 91 9 0 chr13 12319280 12319513 -107964799 + (CCTG)n Simple_repeat Simple_repeat 1 235 0 6 678 889 234 86 25 chr13 12319513 12319628 -107964684 + ORR1D1 LTR MaLR 232 361 -13 6 678 273 57 0 0 chr13 12319725 12319760 -107964552 + (GA)n Simple_repeat Simple_repeat 1 35 0 6 679 551 254 23 0 chr13 12320993 12321123 -107963189 + ID_B1 SINE B4 91 223 -1 6 679 1258 74 73 6 chr13 12321856 12322033 -107962279 - B2_Mm2 SINE B2 -6 189 1 6 679 282 29 0 0 chr13 12322057 12322092 -107962220 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 6 679 318 200 77 39 chr13 12322189 12322267 -107962045 + ID_B1 SINE B4 125 205 -19 6 679 324 0 0 0 chr13 12322291 12322327 -107961985 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 679 449 117 0 38 chr13 12322510 12322590 -107961722 + PB1D9 SINE Alu 42 118 -2 6 679 542 282 44 33 chr13 12322612 12322792 -107961520 - B3A SINE B2 -16 182 1 6 679 651 130 27 27 chr13 12323619 12323730 -107960582 + B1_Mur2 SINE Alu 26 136 -13 6 679 243 250 202 11 chr13 12323844 12323933 -107960379 + B3A SINE B2 81 186 -12 6 679 21 36 0 0 chr13 12323972 12324000 -107960312 + AT_rich Low_complexity Low_complexity 1 28 0 6 679 583 266 23 81 chr13 12324006 12324178 -107960134 + RSINE1 SINE B4 4 165 0 6 679 510 217 19 0 chr13 12324202 12324308 -107960004 - PB1D9 SINE Alu -8 112 5 6 679 893 245 21 0 chr13 12324609 12324801 -107959511 + B3 SINE B2 9 204 -12 6 679 218 314 20 0 chr13 12327139 12327190 -107957122 + B1F2 SINE Alu 3 54 -95 6 679 1237 48 0 0 chr13 12327190 12327337 -107956975 + B1_Mus2 SINE Alu 1 147 0 6 679 331 135 0 0 chr13 12327490 12327542 -107956770 + PB1D9 SINE Alu 28 79 -41 6 679 1418 71 16 0 chr13 12328362 12328545 -107955767 + B2_Mm1a SINE B2 1 186 -7 6 679 2645 192 229 4 chr13 12328804 12329664 -107954648 + RMER1A Other Other 18 1064 -2 6 679 453 217 28 42 chr13 12329955 12330099 -107954213 + B1F1 SINE Alu 1 142 -7 6 679 207 256 0 34 chr13 12330144 12330233 -107954079 + A-rich Low_complexity Low_complexity 5 90 0 6 679 232 135 0 0 chr13 12330677 12330714 -107953598 + B1_Mur4 SINE Alu 2 38 -112 6 679 758 164 0 7 chr13 12330788 12330935 -107953377 + GA-rich Low_complexity Low_complexity 2 147 0 6 679 501 17 0 0 chr13 12330936 12330994 -107953318 + (GGAA)n Simple_repeat Simple_repeat 1 58 0 6 679 234 206 47 16 chr13 12330995 12331059 -107953253 - MER3 DNA MER1_type -86 123 58 6 679 286 246 0 0 chr13 12331147 12331204 -107953108 + PB1D10 SINE Alu 24 80 -37 6 679 230 370 118 22 chr13 12331241 12331564 -107952748 - L2 LINE L2 -2617 802 449 6 679 673 236 55 20 chr13 12332525 12332724 -107951588 - B3 SINE B2 -3 213 8 6 679 345 24 0 0 chr13 12332748 12332790 -107951522 + (GTTTG)n Simple_repeat Simple_repeat 2 43 0 6 679 1167 43 0 0 chr13 12332811 12332949 -107951363 - B1_Mus1 SINE Alu -9 139 2 6 679 596 273 49 7 chr13 12332981 12333125 -107951187 + RSINE1 SINE B4 2 151 -14 6 679 253 304 0 0 chr13 12333128 12333184 -107951128 + RSINE1 SINE B4 110 165 0 6 679 351 293 179 69 chr13 12333969 12334215 -107950097 + L1MC2 LINE L1 6038 6310 -34 6 679 413 304 127 8 chr13 12334299 12334425 -107949887 + ID_B1 SINE B4 84 224 0 6 679 1359 190 103 95 chr13 12334543 12334680 -107949632 + ORR1D1 LTR MaLR 4 143 -231 6 679 986 102 0 52 chr13 12334680 12334835 -107949477 - B1_Mus1 SINE Alu 0 148 2 6 679 1359 190 103 95 chr13 12334835 12335064 -107949248 + ORR1D1 LTR MaLR 144 373 -1 6 679 601 246 16 16 chr13 12335527 12335651 -107948661 - RSINE1 SINE B4 -28 137 14 6 679 1411 79 11 0 chr13 12337410 12337599 -107946713 - B2_Mm1t SINE B2 -1 192 2 6 679 407 256 76 55 chr13 12337743 12337888 -107946424 + B1F SINE Alu 2 149 0 6 679 201 74 0 0 chr13 12337939 12337966 -107946346 + (TTG)n Simple_repeat Simple_repeat 1 27 0 6 679 357 161 32 75 chr13 12337993 12338087 -107946225 - PB1D9 SINE Alu -1 119 30 6 679 570 206 150 41 chr13 12338068 12338215 -107946097 - MTD LTR MaLR -256 163 1 6 679 762 219 128 0 chr13 12338262 12338449 -107945863 + B3 SINE B2 2 212 -4 6 679 272 282 146 0 chr13 12338529 12338632 -107945680 + RSINE1 SINE B4 5 122 -43 6 679 267 31 0 0 chr13 12338666 12338698 -107945614 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 679 914 289 59 22 chr13 12338718 12338990 -107945322 + B4 SINE B4 11 292 0 6 679 632 260 11 56 chr13 12339193 12339372 -107944940 + B3A SINE B2 14 184 -14 6 679 646 70 0 0 chr13 12339905 12339991 -107944321 + B1_Mus2 SINE Alu 62 147 0 6 679 237 321 70 23 chr13 12340952 12340969 -107943343 + PB1D7 SINE Alu 2 91 -29 6 679 341 261 0 0 chr13 12340969 12341038 -107943274 + ID_B1 SINE B4 101 169 -55 6 679 845 166 12 0 chr13 12341072 12341235 -107943077 + GA-rich Low_complexity Low_complexity 3 167 0 6 679 291 127 333 0 chr13 12343154 12343217 -107941095 - B1_Mus2 SINE Alu -63 84 1 6 679 267 169 169 72 chr13 12343155 12343238 -107941074 - MT2B LTR ERVL -361 240 150 6 679 1107 94 0 0 chr13 12343505 12343685 -107940627 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 679 432 284 379 15 chr13 12344040 12344318 -107939994 + ORR1E LTR MaLR 1 379 0 6 679 283 283 49 74 chr13 12344364 12344486 -107939826 + MT2B LTR ERVL 139 257 -344 6 679 870 120 0 36 chr13 12344398 12344536 -107939776 + B1_Mur4 SINE Alu 18 150 0 6 679 879 210 31 5 chr13 12344641 12344837 -107939475 + B3 SINE B2 1 201 -15 6 679 42 20 0 0 chr13 12344892 12344941 -107939371 + AT_rich Low_complexity Low_complexity 1 49 0 6 679 288 77 0 0 chr13 12344944 12344983 -107939329 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 679 662 174 0 0 chr13 12345046 12345161 -107939151 + BC1_Mm scRNA scRNA 1 115 -37 6 679 250 330 27 27 chr13 12345261 12345373 -107938939 + MLT1A0 LTR MaLR 189 300 -65 6 679 960 249 9 14 chr13 12345377 12345593 -107938719 + B3 SINE B2 1 215 -1 6 679 214 243 84 14 chr13 12346293 12346364 -107937948 + ID4 SINE ID 7 82 -1 6 679 270 289 54 63 chr13 12346966 12347077 -107937235 - YREP_Mm Unknown Unknown -1481 331 222 6 679 656 235 36 7 chr13 12346986 12347123 -107937189 + ID_B1 SINE B4 82 222 -2 6 679 273 286 60 20 chr13 12347298 12347398 -107936914 + RSINE1 SINE B4 3 106 -59 6 679 250 253 12 107 chr13 12348071 12348155 -107936157 + ID4 SINE ID 8 83 0 6 679 212 245 82 0 chr13 12348731 12348780 -107935532 - ID2 SINE ID -28 55 3 6 679 298 288 0 0 chr13 12349380 12349446 -107934866 - ID_B1 SINE B4 -12 212 147 6 679 261 291 83 46 chr13 12349446 12349488 -107934824 - B1F SINE Alu -12 137 26 6 679 508 305 19 19 chr13 12351060 12351214 -107933098 + B4A SINE B4 127 280 -12 6 679 241 184 20 0 chr13 12351232 12351281 -107933031 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 679 3035 23 3 0 chr13 12351735 12352080 -107932232 - ORR1A0 LTR MaLR 0 346 1 6 679 3493 97 11 63 chr13 12352540 12353080 -107931232 + RLTR1B LTR ERV1 1 512 0 6 679 1137 48 7 40 chr13 12353148 12353299 -107931013 - B1_Mus2 SINE Alu 0 147 2 6 679 263 222 8 168 chr13 12353476 12353595 -107930717 + MT2B LTR ERVL 152 251 -350 6 679 514 252 9 0 chr13 12353505 12353616 -107930696 + PB1D10 SINE Alu 6 117 0 6 679 21 36 0 0 chr13 12353659 12353687 -107930625 + AT_rich Low_complexity Low_complexity 1 28 0 6 679 306 321 67 0 chr13 12353694 12353828 -107930484 - B1F SINE Alu -6 143 1 6 679 759 238 72 0 chr13 12353857 12354038 -107930274 + B3A SINE B2 3 196 -2 6 679 395 244 193 0 chr13 12354130 12354249 -107930063 - B3A SINE B2 -55 143 2 6 679 545 235 154 49 chr13 12354339 12354585 -107929727 + RLTR10A LTR ERVK 140 411 0 6 679 306 0 0 0 chr13 12354602 12354636 -107929676 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 6 679 611 250 40 0 chr13 12354642 12354766 -107929546 - B1_Mur1 SINE Alu -20 129 1 6 679 232 296 0 27 chr13 12355133 12355206 -107929106 + GA-rich Low_complexity Low_complexity 1 71 0 6 679 232 203 33 17 chr13 12355422 12355482 -107928830 + GA-rich Low_complexity Low_complexity 5 65 0 6 679 1022 278 26 19 chr13 12355636 12355944 -107928368 - RMER5 LTR ERV1 -191 343 34 6 679 1973 160 117 3 chr13 12356234 12356610 -107927702 - MTC LTR MaLR 0 421 3 6 679 1575 123 166 30 chr13 12356639 12357000 -107927312 - RMER17C LTR ERVK 0 410 1 6 679 376 230 155 26 chr13 12357339 12357455 -107926857 - ID_B1 SINE B4 -12 212 82 6 679 907 267 4 43 chr13 12357881 12358073 -107926239 - ID_B1 SINE B4 0 224 37 6 679 3151 58 15 2 chr13 12358073 12358468 -107925844 + MTB LTR MaLR 1 400 0 6 679 907 267 4 43 chr13 12358468 12358506 -107925806 - ID SINE ID -188 36 3 6 679 216 119 48 0 chr13 12359288 12359330 -107924982 + G-rich Low_complexity Low_complexity 1 44 0 6 679 219 103 0 0 chr13 12359332 12359371 -107924941 + (TGGG)n Simple_repeat Simple_repeat 3 41 0 6 679 201 317 48 24 chr13 12359651 12359735 -107924577 + L4 LINE RTE 1299 1384 -645 7 679 1272 41 0 0 chr13 12359908 12360055 -107924257 + B1_Mm SINE Alu 1 147 0 7 679 222 307 51 51 chr13 12360103 12360182 -107924130 + B4 SINE B4 2 80 -212 7 679 617 308 61 10 chr13 12360111 12360308 -107924004 + B3 SINE B2 10 216 0 7 679 456 225 81 47 chr13 12360333 12360482 -107923830 + RSINE1 SINE B4 4 157 -8 7 679 440 198 109 0 chr13 12360529 12360630 -107923682 + PB1D10 SINE Alu 1 112 -5 7 679 395 296 27 18 chr13 12360658 12360768 -107923544 + PB1D10 SINE Alu 5 115 -2 7 679 563 287 56 0 chr13 12361288 12361431 -107922881 - RSINE1 SINE B4 -3 162 12 7 679 217 256 0 0 chr13 12361431 12361474 -107922838 - B4 SINE B4 -248 44 2 7 679 180 0 0 0 chr13 12361495 12361515 -107922797 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 679 814 146 28 7 chr13 12361517 12361662 -107922650 - B1_Mur1 SINE Alu -1 148 1 7 679 247 245 19 0 chr13 12362693 12362746 -107921566 + (CACG)n Simple_repeat Simple_repeat 1 54 0 7 679 305 307 92 87 chr13 12362763 12362959 -107921353 + B4 SINE B4 83 279 -13 7 679 1284 20 0 0 chr13 12363544 12363690 -107920622 + B1_Mus2 SINE Alu 2 147 0 7 679 270 0 0 0 chr13 12363690 12363720 -107920592 + (A)n Simple_repeat Simple_repeat 1 30 0 7 679 390 255 90 9 chr13 12363840 12363951 -107920361 + B1F SINE Alu 14 133 -16 7 679 355 149 29 43 chr13 12364054 12364124 -107920188 + PB1D10 SINE Alu 42 110 -7 7 679 640 126 24 55 chr13 12364176 12364470 -107919842 + CT-rich Low_complexity Low_complexity 1 284 0 7 679 541 239 0 8 chr13 12364474 12364592 -107919720 - PB1D9 SINE Alu -2 118 2 7 679 397 230 13 0 chr13 12365226 12365322 -107918990 + ID2 SINE ID 8 104 -48 7 679 559 179 35 18 chr13 12366356 12366470 -107917842 - B1F2 SINE Alu 0 149 34 7 679 492 268 81 35 chr13 12366614 12366788 -107917524 - B3A SINE B2 -1 197 16 7 679 507 177 0 89 chr13 12366875 12366999 -107917313 - BC1_Mm scRNA scRNA -39 113 1 7 679 384 298 16 24 chr13 12367143 12367267 -107917045 + ID_B1 SINE B4 82 204 -20 7 679 291 28 0 0 chr13 12367599 12367635 -107916677 + (CAG)n Simple_repeat Simple_repeat 1 36 0 7 679 347 307 104 9 chr13 12367649 12367764 -107916548 - RSINE1 SINE B4 -35 130 5 7 679 237 225 0 0 chr13 12367924 12367964 -107916348 - ID4_ SINE ID -9 74 35 7 679 192 40 0 0 chr13 12367965 12367990 -107916322 + (A)n Simple_repeat Simple_repeat 1 25 0 7 679 348 339 80 0 chr13 12368206 12368318 -107915994 + ID_B1 SINE B4 85 205 -19 7 679 180 0 0 0 chr13 12368328 12368348 -107915964 + (CAA)n Simple_repeat Simple_repeat 3 22 0 7 679 618 285 118 49 chr13 12370134 12370422 -107913890 + Charlie4a DNA MER1_type 49 356 -152 7 679 287 283 162 0 chr13 12370498 12370597 -107913715 - ID_B1 SINE B4 -30 194 80 7 679 441 0 0 0 chr13 12370627 12370676 -107913636 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 679 414 0 0 0 chr13 12370676 12370721 -107913591 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 679 244 286 0 0 chr13 12370766 12370815 -107913497 - B4 SINE B4 -209 83 35 7 679 508 215 92 8 chr13 12371293 12371424 -107912888 - ID_B1 SINE B4 -4 220 79 7 679 566 276 287 9 chr13 12371434 12371581 -107912731 - B4 SINE B4 -2 290 88 7 679 261 0 0 0 chr13 12371581 12371610 -107912702 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 7 679 566 276 287 9 chr13 12371610 12371678 -107912634 - B4 SINE B4 -205 87 15 7 679 1396 73 0 35 chr13 12371756 12371954 -107912358 + B2_Mm2 SINE B2 4 194 -1 7 679 240 321 0 0 chr13 12372191 12372244 -107912068 - B4A SINE B4 -5 287 235 7 679 557 247 5 156 chr13 12372278 12372470 -107911842 - RSINE1 SINE B4 0 165 3 7 679 469 87 0 25 chr13 12372898 12372993 -107911319 + L1_Mus2 LINE L1 6498 6584 0 7 679 231 265 88 0 chr13 12373124 12373192 -107911120 - ID4 SINE ID -3 80 7 7 679 241 169 17 17 chr13 12373360 12373420 -107910892 + CT-rich Low_complexity Low_complexity 3 62 0 7 679 683 167 77 35 chr13 12373420 12373563 -107910749 - B1_Mur2 SINE Alu 0 149 1 7 679 760 85 0 36 chr13 12373669 12373779 -107910533 - B2_Mm2 SINE B2 -88 107 2 7 679 661 287 29 6 chr13 12373779 12373944 -107910368 - ID_B1 SINE B4 -39 185 17 7 679 881 237 29 5 chr13 12374067 12374275 -107910037 + B3 SINE B2 1 213 -3 7 679 1597 47 0 10 chr13 12374284 12374478 -107909834 + B2_Mm1a SINE B2 2 193 0 7 679 239 241 0 18 chr13 12374972 12375006 -107909306 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 679 234 0 0 0 chr13 12375006 12375032 -107909280 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 679 208 357 0 12 chr13 12375032 12375082 -107909230 + (TATG)n Simple_repeat Simple_repeat 4 53 0 7 679 407 333 15 15 chr13 12375163 12375297 -107909015 - B4 SINE B4 -69 223 90 7 679 771 244 16 32 chr13 12375298 12375484 -107908828 - B3A SINE B2 -12 186 4 7 679 220 178 0 22 chr13 12375491 12375537 -107908775 - B4 SINE B4 -200 92 48 7 679 413 263 26 99 chr13 12375743 12375895 -107908417 + B4A SINE B4 134 274 -18 7 679 405 0 0 0 chr13 12376643 12376688 -107907624 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 7 679 527 227 0 63 chr13 12376691 12376818 -107907494 - RSINE1 SINE B4 0 165 47 7 679 291 303 82 24 chr13 12377210 12377369 -107906943 + ORR1D1 LTR MaLR 8 170 -200 7 679 1863 100 106 83 chr13 12377387 12377726 -107906586 + ORR1B1 LTR MaLR 47 393 -1 7 679 570 204 9 26 chr13 12377727 12377843 -107906469 + MTD LTR MaLR 5 118 -303 7 679 671 200 42 21 chr13 12377876 12377897 -107906415 - B1_Mus1 SINE Alu -2 146 127 7 679 252 0 0 0 chr13 12377897 12377925 -107906387 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 679 671 200 42 21 chr13 12377925 12378046 -107906266 - B1_Mus1 SINE Alu -22 126 1 7 679 342 194 48 0 chr13 12378046 12378108 -107906204 + MTD LTR MaLR 111 175 -246 7 679 827 278 9 23 chr13 12378154 12378368 -107905944 + B3 SINE B2 1 211 -5 7 679 805 192 84 94 chr13 12378402 12378615 -107905697 + MTD LTR MaLR 196 406 -13 7 679 365 256 56 64 chr13 12378627 12378752 -107905560 + MTEb LTR MaLR 252 375 -4 7 679 293 252 82 103 chr13 12378752 12378898 -107905414 + B4A SINE B4 1 143 -149 7 679 414 0 0 0 chr13 12378998 12379044 -107905268 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 679 25 0 0 0 chr13 12379091 12379116 -107905196 + AT_rich Low_complexity Low_complexity 1 25 0 7 679 727 143 18 0 chr13 12379118 12379230 -107905082 + B1_Mur4 SINE Alu 29 142 -8 7 679 187 93 47 0 chr13 12379336 12379379 -107904933 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 7 679 1245 55 0 0 chr13 12379379 12379525 -107904787 - B1_Mus2 SINE Alu 0 147 2 7 679 438 302 94 6 chr13 12380132 12380312 -107904000 + B3 SINE B2 2 197 -19 7 679 290 259 23 23 chr13 12380939 12381026 -107903286 + PB1D10 SINE Alu 31 117 0 7 679 210 163 139 0 chr13 12381032 12381075 -107903237 + ID4 SINE ID 3 51 -32 7 679 500 214 29 10 chr13 12381395 12381499 -107902813 + PB1D7 SINE Alu 1 106 -14 7 679 834 265 31 36 chr13 12381650 12381873 -107902439 - ID_B1 SINE B4 -1 223 2 7 679 750 112 17 33 chr13 12382015 12382135 -107902177 + PB1D9 SINE Alu 3 120 0 7 679 1203 61 0 0 chr13 12382219 12382367 -107901945 - B1_Mus1 SINE Alu 0 148 1 7 679 677 238 7 0 chr13 12382407 12382550 -107901762 - B3A SINE B2 -16 182 39 7 679 458 318 28 2 chr13 12382555 12382700 -107901612 - B1F1 SINE Alu -2 147 2 7 679 435 275 219 44 chr13 12382755 12382892 -107901420 - RSINE1 SINE B4 0 165 5 7 679 546 231 42 7 chr13 12383535 12383679 -107900633 + B1F1 SINE Alu 1 149 0 7 679 258 156 0 0 chr13 12383679 12383724 -107900588 + GA-rich Low_complexity Low_complexity 1 45 0 7 679 258 292 14 14 chr13 12383729 12383802 -107900510 + ID4_ SINE ID 6 78 -5 7 679 240 262 53 97 chr13 12383802 12383843 -107900469 + ID_B1 SINE B4 6 114 -110 7 679 214 191 0 0 chr13 12384505 12384547 -107899765 + A-rich Low_complexity Low_complexity 1 42 0 7 679 1066 205 19 10 chr13 12384837 12385044 -107899268 - B3 SINE B2 0 216 8 7 679 752 243 53 19 chr13 12385144 12385416 -107898896 + MTE2b LTR MaLR 10 376 -3 7 679 333 0 0 0 chr13 12385511 12385548 -107898764 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 7 679 314 0 49 0 chr13 12385976 12386017 -107898295 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7 679 180 0 0 0 chr13 12386835 12386855 -107897457 + (T)n Simple_repeat Simple_repeat 1 20 0 7 679 373 269 39 0 chr13 12387321 12387425 -107896887 - RMER30 DNA MER1_type -1 201 94 7 679 812 189 0 33 chr13 12387433 12387586 -107896726 - B1_Mur1 SINE Alu -1 148 1 7 679 286 363 69 15 chr13 12387598 12387663 -107896649 - B3 SINE B2 0 216 2 7 679 647 273 36 0 chr13 12387663 12387802 -107896510 - RSINE1 SINE B4 -19 146 3 7 679 222 174 0 0 chr13 12387810 12387856 -107896456 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 679 315 237 0 0 chr13 12387858 12387917 -107896395 - RMER30 DNA MER1_type -122 80 22 7 679 351 306 89 64 chr13 12389065 12389222 -107895090 - RSINE1 SINE B4 -2 163 3 7 679 275 38 18 54 chr13 12389425 12389481 -107894831 + (TGGGGG)n Simple_repeat Simple_repeat 3 56 0 7 679 180 0 0 0 chr13 12389784 12389804 -107894508 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 679 468 293 21 7 chr13 12391000 12391141 -107893171 + B1F SINE Alu 1 143 -6 7 679 284 161 16 0 chr13 12391152 12391214 -107893098 + G-rich Low_complexity Low_complexity 1 63 0 7 679 189 0 0 0 chr13 12392488 12392509 -107891803 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 8 679 311 245 32 113 chr13 12392564 12392688 -107891624 + ID_B1 SINE B4 110 223 -1 8 679 220 254 18 0 chr13 12392710 12392765 -107891547 + ID4_ SINE ID 15 70 -13 8 679 244 256 12 47 chr13 12392772 12392886 -107891426 + (TATG)n Simple_repeat Simple_repeat 1 110 0 8 679 234 0 0 0 chr13 12393688 12393714 -107890598 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 8 679 215 369 24 12 chr13 12393716 12393801 -107890511 - 7SLRNA srpRNA srpRNA -227 87 2 8 679 369 241 72 0 chr13 12393732 12393815 -107890497 - ID_B1 SINE B4 -69 155 67 8 679 244 240 157 20 chr13 12394141 12394243 -107890069 - RSINE1 SINE B4 -49 116 1 8 679 688 198 0 0 chr13 12394754 12394870 -107889442 + PB1D7 SINE Alu 1 116 -4 8 679 411 223 0 41 chr13 12395654 12395752 -107888560 - PB1D10 SINE Alu 0 117 24 8 679 1249 82 65 11 chr13 12395789 12395973 -107888339 - B2_Mm2 SINE B2 0 195 2 8 679 318 264 0 32 chr13 12395984 12396078 -107888234 + ID_B1 SINE B4 79 169 -55 8 679 283 279 35 0 chr13 12396003 12396089 -107888223 + PB1D10 SINE Alu 14 102 -15 8 679 303 287 59 0 chr13 12397162 12397263 -107887049 - PB1D10 SINE Alu -1 116 10 8 679 29 0 0 0 chr13 12397652 12397681 -107886631 + AT_rich Low_complexity Low_complexity 1 29 0 8 679 584 291 30 15 chr13 12397719 12397918 -107886394 - Lx8 LINE L1 -83 7390 7189 8 679 669 25 0 0 chr13 12398648 12398727 -107885585 + (TG)n Simple_repeat Simple_repeat 1 79 0 8 679 25 65 0 0 chr13 12399264 12399310 -107885002 + AT_rich Low_complexity Low_complexity 1 46 0 8 679 192 158 0 0 chr13 12399312 12399350 -107884962 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 679 471 207 118 87 chr13 12399350 12399477 -107884835 - RSINE1 SINE B4 0 165 35 8 679 775 217 86 0 chr13 12399843 12400018 -107884294 + B3A SINE B2 9 198 0 8 679 350 328 104 0 chr13 12400513 12400638 -107883674 - B1F1 SINE Alu -11 138 1 8 679 258 306 24 0 chr13 12400775 12400860 -107883452 + GA-rich Low_complexity Low_complexity 2 88 0 8 679 345 247 0 0 chr13 12402643 12402724 -107881588 - B1F SINE Alu -2 147 67 8 679 224 189 0 0 chr13 12402751 12402804 -107881508 - B1F SINE Alu -23 126 74 8 679 316 279 135 0 chr13 12402867 12402978 -107881334 - B1F1 SINE Alu -23 126 1 8 679 480 261 18 18 chr13 12403536 12403649 -107880663 - RSINE1 SINE B4 -36 129 17 8 679 333 0 0 0 chr13 12404064 12404101 -107880211 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 679 300 27 0 0 chr13 12404101 12404137 -107880175 + (GA)n Simple_repeat Simple_repeat 1 37 0 8 679 524 267 22 30 chr13 12404137 12404272 -107880040 - B3A SINE B2 -42 156 23 8 679 655 246 112 5 chr13 12405168 12405364 -107878948 + ID_B1 SINE B4 5 221 -3 8 679 351 271 21 226 chr13 12405386 12405458 -107878854 + RSINE1 SINE B4 1 60 -105 8 679 1618 21 11 11 chr13 12405458 12405649 -107878663 + B2_Mm1t SINE B2 2 192 -1 8 679 351 271 21 226 chr13 12405649 12405762 -107878550 + RSINE1 SINE B4 61 148 -17 8 679 198 0 0 0 chr13 12405776 12405798 -107878514 + (CA)n Simple_repeat Simple_repeat 2 23 0 8 679 466 211 18 27 chr13 12406895 12407007 -107877305 + PB1D10 SINE Alu 1 111 -6 8 679 346 278 9 85 chr13 12407085 12407145 -107877167 + RSINE1 SINE B4 68 125 -40 8 679 423 0 0 0 chr13 12407145 12407192 -107877120 + (TC)n Simple_repeat Simple_repeat 1 47 0 8 679 346 278 9 85 chr13 12407192 12407237 -107877075 + RSINE1 SINE B4 126 165 0 8 679 511 230 157 97 chr13 12407448 12407665 -107876647 + MTEa LTR MaLR 27 256 -123 8 679 360 0 0 0 chr13 12407766 12407806 -107876506 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 679 899 230 0 109 chr13 12408456 12408650 -107875662 - B3 SINE B2 -5 211 41 8 679 1533 48 21 0 chr13 12408650 12408838 -107875474 - B2_Mm1a SINE B2 -1 192 1 8 679 899 230 0 109 chr13 12408838 12408872 -107875440 - B3 SINE B2 -176 40 8 8 679 311 276 23 0 chr13 12409034 12409048 -107875264 - ID_B1 SINE B4 -126 98 10 8 679 332 274 0 0 chr13 12409048 12409121 -107875191 - ID4_ SINE ID -1 82 10 8 679 338 306 71 8 chr13 12409126 12409254 -107875058 - PB1D10 SINE Alu -13 136 1 8 679 459 35 0 0 chr13 12409327 12409384 -107874928 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 679 399 202 0 0 chr13 12410019 12410103 -107874209 + (TA)n Simple_repeat Simple_repeat 2 85 0 8 679 360 0 0 0 chr13 12410673 12410713 -107873599 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 679 411 204 118 0 chr13 12410749 12410842 -107873470 + B1_Mur2 SINE Alu 1 104 -45 8 679 502 222 28 0 chr13 12410834 12410942 -107873370 + B1_Mur2 SINE Alu 27 137 -12 8 679 218 274 0 101 chr13 12411194 12411263 -107873049 + ID4_ SINE ID 9 70 -13 8 679 239 292 14 0 chr13 12411566 12411638 -107872674 + GA-rich Low_complexity Low_complexity 3 75 0 8 679 246 125 0 0 chr13 12411640 12411688 -107872624 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 8 679 431 224 181 52 chr13 12411991 12412184 -107872128 - ID_B1 SINE B4 -5 219 2 8 679 401 226 46 28 chr13 12412191 12412300 -107872012 - PB1D7 SINE Alu -6 114 4 8 679 216 256 0 0 chr13 12412486 12412529 -107871783 + polypurine Low_complexity Low_complexity 3 45 0 8 679 366 228 13 0 chr13 12412951 12413030 -107871282 + PB1D7 SINE Alu 1 80 -40 8 679 892 59 127 0 chr13 12413088 12413206 -107871106 + B1_Mus2 SINE Alu 2 134 -13 8 679 356 219 39 68 chr13 12413376 12413479 -107870833 - B3A SINE B2 -84 114 15 8 679 827 266 60 45 chr13 12413518 12413786 -107870526 - B4A SINE B4 -14 278 7 8 679 451 233 43 8 chr13 12413962 12414079 -107870233 + B1F SINE Alu 2 122 -27 8 679 721 211 130 0 chr13 12414436 12414597 -107869715 - B3 SINE B2 -1 215 34 8 679 268 220 0 0 chr13 12414591 12414650 -107869662 - PB1D9 SINE Alu -13 107 49 8 679 795 184 0 0 chr13 12414711 12414847 -107869465 + RSINE1 SINE B4 2 137 -28 8 679 438 114 0 0 chr13 12414875 12414945 -107869367 + (CA)n Simple_repeat Simple_repeat 1 70 0 8 679 338 210 24 24 chr13 12415019 12415102 -107869210 - ID4 SINE ID 0 83 1 8 679 855 248 5 10 chr13 12416044 12416252 -107868060 + B3 SINE B2 2 208 -8 8 679 627 222 64 25 chr13 12416533 12416690 -107867622 + RSINE1 SINE B4 3 165 0 8 679 27 29 0 0 chr13 12416690 12416724 -107867588 + AT_rich Low_complexity Low_complexity 1 34 0 8 679 621 278 44 29 chr13 12416849 12417053 -107867259 - ID_B1 SINE B4 -17 207 1 8 679 340 205 48 12 chr13 12417200 12417284 -107867028 - ID_B1 SINE B4 0 224 138 8 679 221 240 92 46 chr13 12417284 12417309 -107867003 - PB1D10 SINE Alu -1 116 3 8 679 405 0 0 0 chr13 12417668 12417713 -107866599 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 679 595 242 18 37 chr13 12417730 12417893 -107866419 - B3A SINE B2 -38 160 1 8 679 837 283 5 0 chr13 12418084 12418289 -107866023 + B3 SINE B2 4 209 -7 8 679 528 252 23 10 chr13 12418490 12418633 -107865679 + B1F1 SINE Alu 1 142 -8 8 679 232 170 0 0 chr13 12418702 12418749 -107865563 + A-rich Low_complexity Low_complexity 3 49 0 8 679 479 239 28 0 chr13 12419194 12419303 -107865009 + PB1D10 SINE Alu 1 112 -5 8 679 217 353 0 14 chr13 12419317 12419386 -107864926 + ID4 SINE ID 1 68 -15 8 679 590 277 13 0 chr13 12419442 12419601 -107864711 - RSINE1 SINE B4 -4 161 1 8 679 675 237 67 26 chr13 12419994 12420189 -107864123 - ID_B1 SINE B4 -18 206 4 8 679 793 249 16 0 chr13 12420269 12420454 -107863858 - B3 SINE B2 -10 206 19 8 679 262 267 17 0 chr13 12421284 12421344 -107862968 - RSINE1 SINE B4 -99 66 6 8 679 608 211 0 7 chr13 12421362 12421510 -107862802 + (TA)n Simple_repeat Simple_repeat 1 147 0 8 679 307 314 39 10 chr13 12421678 12421781 -107862531 + PB1D9 SINE Alu 6 111 -9 8 679 606 143 0 0 chr13 12421784 12421889 -107862423 + (TA)n Simple_repeat Simple_repeat 2 106 0 8 679 393 22 0 0 chr13 12422725 12422771 -107861541 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 679 285 280 21 11 chr13 12422839 12422933 -107861379 - ID_B1 SINE B4 -8 216 122 8 679 26 50 0 0 chr13 12423349 12423389 -107860923 + AT_rich Low_complexity Low_complexity 1 40 0 8 679 776 236 48 15 chr13 12423435 12423641 -107860671 - B3 SINE B2 -2 214 2 8 679 257 183 9 55 chr13 12423721 12423831 -107860481 + (TATATG)n Simple_repeat Simple_repeat 6 110 0 8 679 516 110 38 55 chr13 12423805 12423988 -107860324 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 8 679 655 123 52 0 chr13 12423978 12424132 -107860180 + (TG)n Simple_repeat Simple_repeat 2 163 0 8 679 409 224 52 12 chr13 12424146 12424318 -107859994 + (TG)n Simple_repeat Simple_repeat 1 179 0 8 679 369 0 0 0 chr13 12424373 12424414 -107859898 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 679 437 238 39 23 chr13 12424428 12424557 -107859755 - RSINE1 SINE B4 -33 132 2 8 679 194 62 31 0 chr13 12424631 12424663 -107859649 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 8 679 267 302 0 11 chr13 12424690 12424777 -107859535 + B3A SINE B2 88 173 -25 8 679 2361 8 0 0 chr13 12424885 12425145 -107859167 - L1Md_A LINE L1 0 6582 6323 8 679 284 161 0 16 chr13 12425397 12425460 -107858852 + GA-rich Low_complexity Low_complexity 1 62 0 8 679 519 17 0 0 chr13 12425798 12425858 -107858454 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 679 378 0 0 0 chr13 12425902 12425944 -107858368 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 679 1008 256 28 28 chr13 12425991 12426276 -107858036 + B4A SINE B4 2 286 -6 8 679 228 35 0 0 chr13 12426724 12426753 -107857559 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 9 679 643 288 6 24 chr13 12428157 12428324 -107855988 + RSINE1 SINE B4 2 165 0 9 679 711 215 6 19 chr13 12428474 12428805 -107855507 + (TATG)n Simple_repeat Simple_repeat 1 326 0 9 679 405 237 0 0 chr13 12428805 12428881 -107855431 - ID4 SINE ID -6 77 2 9 679 409 253 13 0 chr13 12428881 12428894 -107855418 + (TATG)n Simple_repeat Simple_repeat 3 16 0 9 679 355 214 43 0 chr13 12429343 12429413 -107854899 + ID2 SINE ID 4 76 -7 9 679 261 0 0 0 chr13 12429643 12429672 -107854640 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 9 679 887 274 29 0 chr13 12429672 12429876 -107854436 - ID_B1 SINE B4 -12 212 3 9 679 246 128 0 0 chr13 12430530 12430569 -107853743 + (T)n Simple_repeat Simple_repeat 1 39 0 9 679 407 309 0 0 chr13 12430569 12430666 -107853646 - B1F1 SINE Alu -52 97 1 9 679 213 65 0 0 chr13 12430871 12430902 -107853410 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 9 679 992 49 90 7 chr13 12430902 12431047 -107853265 - B2_Mm2 SINE B2 -37 158 2 9 679 216 0 0 0 chr13 12432453 12432477 -107851835 + (CA)n Simple_repeat Simple_repeat 2 25 0 9 679 783 75 0 0 chr13 12432811 12432918 -107851394 + (TGGA)n Simple_repeat Simple_repeat 2 108 0 9 679 392 309 17 51 chr13 12433335 12433383 -107850929 + polypyrimidine Low_complexity Low_complexity 127 174 0 9 679 315 0 0 0 chr13 12433383 12433418 -107850894 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 679 243 0 0 0 chr13 12433418 12433444 -107850868 + (CA)n Simple_repeat Simple_repeat 1 27 0 9 679 424 313 6 24 chr13 12433444 12433616 -107850696 + CT-rich Low_complexity Low_complexity 1 168 0 9 679 406 295 189 0 chr13 12434377 12434499 -107849813 - ID_B1 SINE B4 -32 192 48 9 679 301 319 120 12 chr13 12434701 12434942 -107849370 + L1MEc LINE L1 153 419 -5981 9 679 3318 36 8 2 chr13 12435406 12435800 -107848512 + MTA_Mm LTR MaLR 1 396 0 9 679 585 256 43 22 chr13 12435800 12435984 -107848328 + L1M3 LINE L1 5506 5693 -478 9 679 351 0 0 0 chr13 12436286 12436325 -107847987 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 679 192 40 0 0 chr13 12436359 12436384 -107847928 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 679 483 278 141 62 chr13 12436434 12436937 -107847375 + L1MEc LINE L1 3962 4504 -1815 9 679 377 292 116 56 chr13 12436937 12437187 -107847125 + L1M5 LINE L1 3514 3778 -2368 9 679 477 219 8 31 chr13 12437214 12437341 -107846971 + B1_Mm SINE Alu 1 124 -23 9 679 1157 55 0 7 chr13 12437514 12437660 -107846652 + B1_Mus2 SINE Alu 1 145 -2 9 679 266 359 7 51 chr13 12437669 12437807 -107846505 + B4A SINE B4 10 141 -151 9 679 396 0 0 0 chr13 12437912 12437956 -107846356 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 679 577 293 0 6 chr13 12437967 12438132 -107846180 + L1MA10 LINE L1 6171 6334 0 9 679 480 191 28 37 chr13 12438378 12438487 -107845825 - B3A SINE B2 -86 112 5 9 679 464 288 64 0 chr13 12439369 12439494 -107844818 + RSINE1 SINE B4 3 135 -30 9 679 22 35 0 0 chr13 12439513 12439542 -107844770 + AT_rich Low_complexity Low_complexity 1 29 0 9 679 1158 76 0 0 chr13 12439766 12439911 -107844401 + B1_Mus2 SINE Alu 1 145 -2 9 679 186 71 0 0 chr13 12439912 12439940 -107844372 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 9 679 476 183 56 28 chr13 12440082 12440189 -107844123 + MTE2a LTR MaLR 194 303 -76 9 679 580 281 54 0 chr13 12440225 12440392 -107843920 + B3A SINE B2 14 189 -9 9 679 376 154 115 0 chr13 12440402 12440480 -107843832 + B3 SINE B2 2 88 -128 9 679 261 338 20 34 chr13 12440482 12440629 -107843683 - MIRb SINE MIR -32 236 92 9 679 792 164 55 35 chr13 12440845 12440990 -107843322 - B1_Mur3 SINE Alu 0 149 2 9 679 594 218 83 0 chr13 12441207 12441340 -107842972 + B1F SINE Alu 1 144 -5 9 679 26 30 0 0 chr13 12441426 12441459 -107842853 + AT_rich Low_complexity Low_complexity 1 33 0 9 679 403 253 123 32 chr13 12442292 12442447 -107841865 + ORR1E LTR MaLR 3 171 -188 9 679 348 259 52 23 chr13 12442577 12442809 -107841503 - MTD LTR MaLR -21 398 42 9 679 1096 250 59 70 chr13 12443298 12443500 -107840812 - ORR1D2 LTR MaLR 0 370 152 9 679 1089 88 0 7 chr13 12443500 12443648 -107840664 + B1_Mus2 SINE Alu 1 147 0 9 679 1096 250 59 70 chr13 12443648 12443819 -107840493 - ORR1D2 LTR MaLR -219 151 1 9 679 288 0 0 0 chr13 12443877 12443909 -107840403 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 9 679 195 69 0 0 chr13 12444516 12444545 -107839767 + (TAGA)n Simple_repeat Simple_repeat 1 29 0 9 679 945 272 45 64 chr13 12445103 12445461 -107838851 - ORR1E LTR MaLR -7 352 2 9 679 401 0 20 0 chr13 12445754 12445803 -107838509 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 679 609 14 0 0 chr13 12445803 12445872 -107838440 + (GA)n Simple_repeat Simple_repeat 1 70 0 9 679 1019 179 0 0 chr13 12445873 12446035 -107838277 - B3 SINE B2 -54 162 1 9 679 694 275 22 31 chr13 12446044 12446269 -107838043 - ID_B1 SINE B4 0 224 2 9 679 1154 59 0 0 chr13 12446314 12446466 -107837846 + B2_Mm2 SINE B2 1 152 -43 9 679 342 0 0 0 chr13 12446466 12446504 -107837808 + (TA)n Simple_repeat Simple_repeat 1 38 0 9 679 3481 23 5 0 chr13 12447043 12447437 -107836875 + MTA_Mm LTR MaLR 1 396 0 9 679 348 210 0 0 chr13 12447785 12447866 -107836446 + GA-rich Low_complexity Low_complexity 2 82 0 9 679 186 133 0 0 chr13 12447953 12447983 -107836329 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 679 598 298 78 81 chr13 12448305 12448652 -107835660 - ORR1E LTR MaLR -5 354 9 9 679 374 291 0 41 chr13 12449039 12449161 -107835151 - RSINE1 SINE B4 0 165 49 9 679 607 219 12 43 chr13 12449162 12449324 -107834988 - RSINE1 SINE B4 -7 158 2 9 679 480 296 91 12 chr13 12449330 12449583 -107834729 - L1MC LINE L1 -895 5251 4979 9 679 521 302 0 0 chr13 12450493 12450632 -107833680 - B4 SINE B4 -67 225 87 9 679 459 78 0 0 chr13 12450648 12450712 -107833600 + (TTTA)n Simple_repeat Simple_repeat 1 64 0 9 679 446 226 40 73 chr13 12450716 12450840 -107833472 - RSINE1 SINE B4 -29 136 17 9 679 1230 54 0 0 chr13 12450846 12450994 -107833318 - B1_Mus1 SINE Alu 0 148 1 9 679 1235 65 0 6 chr13 12450997 12451168 -107833144 - B2_Mm2 SINE B2 -25 170 1 9 679 326 270 33 11 chr13 12451192 12451282 -107833030 - B4 SINE B4 -198 94 3 9 680 232 174 109 0 chr13 12451890 12451936 -107832376 - B4 SINE B4 -17 275 225 9 680 253 282 0 40 chr13 12452184 12452258 -107832054 - B4A SINE B4 -196 96 26 9 680 260 276 21 75 chr13 12452610 12452704 -107831608 + MER45A DNA Tip100 89 177 -1 9 680 214 143 16 16 chr13 12452723 12452787 -107831525 + A-rich Low_complexity Low_complexity 3 66 0 9 680 381 305 0 0 chr13 12453848 12453953 -107830359 - MER91B DNA Tip100 -51 139 35 9 680 793 201 98 0 chr13 12454078 12454242 -107830070 + B3 SINE B2 1 180 -36 9 680 312 27 0 0 chr13 12454252 12454289 -107830023 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 680 714 229 29 0 chr13 12454451 12454591 -107829721 - MTEa LTR MaLR -234 145 2 9 680 4711 63 3 2 chr13 12454591 12455177 -107829135 + LTRIS_Mus LTR ERV1 1 587 0 9 680 558 213 41 22 chr13 12455374 12455508 -107828804 - B1_Mur2 SINE Alu 0 149 6 9 680 228 312 44 44 chr13 12455556 12455670 -107828642 + MER21B LTR ERV1 570 683 -180 9 680 1319 256 41 24 chr13 12455714 12456083 -107828229 - MTE2b LTR MaLR -4 375 1 9 680 693 180 141 24 chr13 12456477 12456671 -107827641 + ORR1E LTR MaLR 3 217 -161 9 680 380 280 72 67 chr13 12456740 12457030 -107827282 + MTEa LTR MaLR 18 372 -7 9 680 572 194 134 0 chr13 12457084 12457218 -107827094 + ID_B1 SINE B4 4 155 -69 9 680 709 90 224 0 chr13 12457219 12457353 -107826959 + B2_Mm2 SINE B2 2 165 -30 9 680 362 94 0 0 chr13 12457393 12457457 -107826855 + B2_Mm1t SINE B2 128 191 -2 9 680 397 155 70 0 chr13 12457452 12457523 -107826789 + ID_B1 SINE B4 143 218 -6 9 680 346 155 17 0 chr13 12457535 12457593 -107826719 + RSINE1 SINE B4 67 125 -40 9 680 378 0 0 0 chr13 12457619 12457661 -107826651 + (TC)n Simple_repeat Simple_repeat 1 42 0 9 680 374 0 22 0 chr13 12457661 12457706 -107826606 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 680 21 0 0 0 chr13 12457725 12457746 -107826566 + AT_rich Low_complexity Low_complexity 1 21 0 9 680 329 22 0 0 chr13 12457757 12457802 -107826510 + L1Md_F3 LINE L1 6524 6568 -16 9 680 2022 95 9 70 chr13 12458203 12458544 -107825768 - ORR1A3 LTR MaLR 0 326 7 9 680 9610 138 68 27 chr13 12458542 12458611 -107825701 - ORR1A3-int LTR MaLR -8 1955 1894 9 680 1042 110 0 0 chr13 12458611 12458757 -107825555 + B1_Mus1 SINE Alu 3 148 0 9 680 9610 138 68 27 chr13 12458757 12460563 -107823749 - ORR1A3-int LTR MaLR -70 1893 2 9 680 2223 117 28 0 chr13 12460563 12460880 -107823432 - ORR1A3 LTR MaLR 0 326 1 9 680 855 285 102 4 chr13 12460953 12461217 -107823095 - B4A SINE B4 -2 290 1 9 680 223 130 43 0 chr13 12463117 12463163 -107821149 + B3A SINE B2 1 48 -150 9 680 7862 68 4 0 chr13 12463163 12464196 -107820116 + L1_Mus1 LINE L1 5531 6567 0 9 680 384 22 0 0 chr13 12464211 12464256 -107820056 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 680 805 212 61 0 chr13 12464260 12464425 -107819887 + B3 SINE B2 37 211 -5 9 680 213 121 0 0 chr13 12464426 12464459 -107819853 + (TG)n Simple_repeat Simple_repeat 2 34 0 9 680 532 253 5 138 chr13 12464560 12464748 -107819564 - RSINE1 SINE B4 0 165 3 9 680 29 47 0 0 chr13 12464759 12464802 -107819510 + AT_rich Low_complexity Low_complexity 1 43 0 9 680 448 214 116 0 chr13 12464804 12464916 -107819396 - RSINE1 SINE B4 -38 127 3 9 680 365 232 37 0 chr13 12465186 12465268 -107819044 - MTEb LTR MaLR 0 379 295 9 680 540 260 152 56 chr13 12465274 12465596 -107818716 + ORR1E LTR MaLR 7 359 0 9 680 432 0 0 0 chr13 12466069 12466117 -107818195 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 680 260 279 101 60 chr13 12466247 12466396 -107817916 - L1MB3 LINE L1 -1 6170 6016 1 680 1736 21 0 0 chr13 12466407 12466599 -107817713 + B2_Mm1t SINE B2 1 192 -1 1 680 1166 56 0 7 chr13 12466608 12466752 -107817560 + B1_Mus1 SINE Alu 1 143 -5 1 680 477 0 0 0 chr13 12466753 12466806 -107817506 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 680 438 235 51 67 chr13 12466806 12466825 -107817487 - L1MB3 LINE L1 -131 6040 6023 1 680 883 193 88 39 chr13 12466825 12467030 -107817282 + B3 SINE B2 2 216 0 1 680 464 225 52 52 chr13 12467030 12467188 -107817124 - L1MB3 LINE L1 -149 6022 5866 1 680 906 281 39 92 chr13 12467189 12467549 -107816763 + ORR1E LTR MaLR 4 344 -15 1 680 358 276 199 17 chr13 12467552 12467843 -107816469 - MLT1H-int LTR MaLR -1049 360 17 1 680 1278 229 101 20 chr13 12467881 12468229 -107816083 - MTE2a LTR MaLR 0 379 4 1 680 810 184 13 13 chr13 12469497 12469646 -107814666 - B1_Mur1 SINE Alu 0 149 1 1 680 201 244 0 0 chr13 12469660 12469705 -107814607 + CT-rich Low_complexity Low_complexity 2 46 0 1 680 225 281 125 0 chr13 12469710 12469774 -107814538 - ID4 SINE ID -11 72 1 1 680 200 260 0 0 chr13 12470741 12470791 -107813521 + GA-rich Low_complexity Low_complexity 1 50 0 1 680 234 0 0 0 chr13 12470941 12470967 -107813345 + (A)n Simple_repeat Simple_repeat 1 26 0 1 680 282 95 0 0 chr13 12471023 12471065 -107813247 + (CATA)n Simple_repeat Simple_repeat 1 42 0 1 680 2023 92 43 0 chr13 12471093 12471396 -107812916 + ORR1A2 LTR MaLR 5 320 -7 1 680 924 254 18 5 chr13 12471530 12471748 -107812564 - ID_B1 SINE B4 0 224 4 1 680 346 342 43 5 chr13 12472333 12472521 -107811791 - L2a LINE L2 -8 3418 3224 1 680 2553 80 3 12 chr13 12472524 12472854 -107811458 - ORR1A2 LTR MaLR 0 327 1 1 680 294 229 0 0 chr13 12472956 12473004 -107811308 + MERVL_2A-int LTR ERVL 4572 4619 -1142 1 680 1042 70 0 0 chr13 12473052 12473195 -107811117 + MTB_Mm LTR MaLR 265 407 0 1 680 468 252 0 0 chr13 12473228 12473335 -107810977 + PB1D10 SINE Alu 9 115 -2 1 680 392 255 9 38 chr13 12473565 12473671 -107810641 + ID_B1 SINE B4 105 207 -17 1 680 285 51 0 0 chr13 12473711 12473750 -107810562 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 680 911 143 0 33 chr13 12474255 12474407 -107809905 + B1_Mus1 SINE Alu 1 147 -1 1 680 1370 74 17 6 chr13 12474414 12474591 -107809721 + B2_Mm2 SINE B2 3 181 -14 1 680 346 45 0 82 chr13 12474641 12474714 -107809598 + B2_Mm1a SINE B2 127 193 0 1 680 21 0 0 0 chr13 12474718 12474739 -107809573 + AT_rich Low_complexity Low_complexity 1 21 0 1 680 473 231 0 136 chr13 12474749 12474804 -107809508 - PB1D9 SINE Alu -8 112 59 1 680 2368 211 12 114 chr13 12474804 12475485 -107808827 + RMER19C LTR ERVK 1 611 0 1 680 473 231 0 136 chr13 12475485 12475554 -107808758 - PB1D9 SINE Alu -62 58 5 1 680 543 258 92 106 chr13 12475592 12475809 -107808503 + B3A SINE B2 2 215 -1 1 680 1005 181 70 10 chr13 12475814 12476015 -107808297 + B3 SINE B2 4 216 0 1 680 213 39 0 0 chr13 12476122 12476148 -107808164 + (CATG)n Simple_repeat Simple_repeat 1 26 0 1 680 241 291 0 0 chr13 12476160 12476215 -107808097 - ID4_ SINE ID -21 62 8 1 680 1054 49 0 0 chr13 12476534 12476676 -107807636 + B1_Mus2 SINE Alu 6 147 0 1 680 774 194 0 40 chr13 12476753 12476903 -107807409 + B1_Mur2 SINE Alu 6 149 0 1 680 1032 193 48 24 chr13 12476956 12476992 -107807320 - B3 SINE B2 -4 212 167 1 680 393 22 0 0 chr13 12476992 12477038 -107807274 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 680 1032 193 48 24 chr13 12477038 12477208 -107807104 - B3 SINE B2 -50 166 2 1 680 229 337 11 0 chr13 12477295 12477387 -107806925 - L1M5 LINE L1 -474 5650 5558 1 680 23 33 0 0 chr13 12477453 12477483 -107806829 + AT_rich Low_complexity Low_complexity 1 30 0 1 680 925 150 20 13 chr13 12477524 12477673 -107806639 - B1_Mur4 SINE Alu 0 150 1 1 680 764 192 3 6 chr13 12477740 12478088 -107806224 + (TG)n Simple_repeat Simple_repeat 1 346 0 1 680 981 238 63 45 chr13 12478088 12478374 -107805938 - B4A SINE B4 0 292 2 1 680 25 31 0 0 chr13 12478855 12478887 -107805425 + AT_rich Low_complexity Low_complexity 1 32 0 1 680 403 235 12 0 chr13 12478889 12478974 -107805338 + PB1D10 SINE Alu 5 90 -27 1 680 240 250 8 32 chr13 12479306 12479430 -107804882 + C-rich Low_complexity Low_complexity 2 122 0 1 680 454 114 160 64 chr13 12479459 12479553 -107804759 + PB1D9 SINE Alu 5 107 -13 1 680 452 295 8 0 chr13 12479567 12479689 -107804623 - ID_B1 SINE B4 -20 204 82 1 680 626 180 0 27 chr13 12479808 12479991 -107804321 + (CA)n Simple_repeat Simple_repeat 1 178 0 1 680 1073 109 0 0 chr13 12479992 12480139 -107804173 + B1_Mus1 SINE Alu 2 148 0 1 680 277 103 34 17 chr13 12480139 12480198 -107804114 + A-rich Low_complexity Low_complexity 1 60 0 1 680 192 228 0 0 chr13 12480204 12480261 -107804051 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 680 405 325 30 108 chr13 12480393 12480690 -107803622 + Zaphod DNA Tip100 331 604 -3427 1 680 481 261 8 0 chr13 12481383 12481502 -107802810 - RSINE1 SINE B4 -43 122 3 1 680 298 212 212 0 chr13 12481528 12481646 -107802666 + Lx7 LINE L1 433 575 -7153 1 680 9079 149 59 102 chr13 12481635 12482180 -107802132 + Lx7 LINE L1 3717 4269 -1611 1 680 1180 48 7 7 chr13 12482180 12482326 -107801986 - B1_Mm SINE Alu 0 147 2 1 680 9079 149 59 102 chr13 12482326 12482676 -107801636 + Lx7 LINE L1 4270 4624 -1256 1 680 327 25 0 0 chr13 12482676 12482716 -107801596 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 680 9079 149 59 102 chr13 12482716 12483345 -107800967 + Lx7 LINE L1 4625 5270 -610 1 680 1120 58 0 7 chr13 12483345 12483484 -107800828 + B1_Mm SINE Alu 1 138 -9 1 680 324 0 0 0 chr13 12483484 12483520 -107800792 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 680 9079 149 59 102 chr13 12483520 12484074 -107800238 + Lx7 LINE L1 5271 5707 -173 1 680 605 51 0 0 chr13 12484138 12484217 -107800095 + B1_Mus1 SINE Alu 1 79 -69 1 680 8311 197 68 41 chr13 12484707 12485055 -107799257 + Lx7 LINE L1 5707 6055 -1641 1 680 261 0 0 0 chr13 12485055 12485084 -107799228 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 680 8311 197 68 41 chr13 12485084 12485754 -107798558 + Lx7 LINE L1 6056 6774 -922 1 680 513 0 0 0 chr13 12485754 12485811 -107798501 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 680 8311 197 68 41 chr13 12485811 12486700 -107797612 + Lx7 LINE L1 6775 7665 -31 1 680 777 176 28 14 chr13 12486737 12486881 -107797431 - B1_Mur4 SINE Alu 0 150 5 1 680 216 0 0 0 chr13 12489057 12489081 -107795231 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 680 375 200 38 0 chr13 12489081 12489161 -107795151 - PB1D9 SINE Alu -9 111 29 1 680 700 197 35 0 chr13 12489242 12489384 -107794928 - B1_Mus2 SINE Alu 0 147 1 1 680 366 265 9 64 chr13 12489420 12489529 -107794783 - B1_Mus1 SINE Alu -35 113 11 1 680 308 359 46 46 chr13 12489425 12489577 -107794735 - B4 SINE B4 -94 198 47 1 680 307 222 14 0 chr13 12489731 12489803 -107794509 - B3A SINE B2 -124 74 2 1 680 508 266 82 33 chr13 12490044 12490227 -107794085 + B3 SINE B2 1 192 -24 1 680 684 201 14 14 chr13 12490423 12490564 -107793748 + B1_Mus1 SINE Alu 6 146 -2 1 680 464 202 35 44 chr13 12490965 12491079 -107793233 + B1F2 SINE Alu 37 149 0 1 680 183 42 0 0 chr13 12491396 12491420 -107792892 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 680 321 187 50 12 chr13 12491423 12491508 -107792804 - PB1D9 SINE Alu -8 112 33 1 680 509 160 43 0 chr13 12491554 12491648 -107792664 - B1_Mur1 SINE Alu -1 148 51 1 680 1576 43 21 0 chr13 12491891 12492077 -107792235 - B2_Mm1t SINE B2 -3 190 1 1 680 1184 54 0 0 chr13 12492877 12493024 -107791288 + B1_Mus2 SINE Alu 1 147 0 1 680 527 290 32 6 chr13 12494496 12494652 -107789660 - RSINE1 SINE B4 -2 163 4 1 680 284 264 66 0 chr13 12494664 12494755 -107789557 - PB1D10 SINE Alu 0 117 21 1 680 3253 39 0 0 chr13 12496107 12496492 -107787820 - L1Md_T LINE L1 0 6582 6198 1 680 734 233 26 53 chr13 12496807 12496997 -107787315 + B3A SINE B2 3 187 -11 1 680 1199 144 0 10 chr13 12497329 12497526 -107786786 - B2_Mm2 SINE B2 0 195 1 1 680 180 324 160 13 chr13 12498110 12498260 -107786052 + MIRb SINE MIR 90 261 -7 1 680 1388 64 27 5 chr13 12500065 12500253 -107784059 - B2_Mm2 SINE B2 -2 193 2 1 680 222 354 79 79 chr13 12500298 12500332 -107783980 - B2_Mm2 SINE B2 -8 187 10 2 680 449 288 62 35 chr13 12500332 12500476 -107783836 - RSINE1 SINE B4 -7 158 11 3 680 1222 54 0 0 chr13 12500516 12500663 -107783649 - B1_Mm SINE Alu 0 147 1 4 680 477 50 0 0 chr13 12501713 12501773 -107782539 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 680 302 315 21 32 chr13 12501773 12501868 -107782444 - RSINE1 SINE B4 -18 147 54 6 680 348 256 107 46 chr13 12501904 12502035 -107782277 - Lx8 LINE L1 -70 7403 7265 7 680 602 293 14 57 chr13 12502097 12502307 -107782005 - B3 SINE B2 -14 202 2 8 680 211 216 0 0 chr13 12502412 12502463 -107781849 + T-rich Low_complexity Low_complexity 1 51 0 9 680 1246 126 5 16 chr13 12502965 12503159 -107781153 - B2_Mm1t SINE B2 0 193 2 1 680 180 0 0 0 chr13 12503176 12503196 -107781116 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 680 560 168 86 38 chr13 12503788 12503893 -107780419 - B1F SINE Alu -29 120 11 1 680 609 52 0 0 chr13 12505312 12505389 -107778923 + (CA)n Simple_repeat Simple_repeat 1 77 0 1 680 549 244 17 9 chr13 12506958 12507074 -107777238 + RSINE1 SINE B4 8 124 -41 1 680 39 22 0 0 chr13 12507133 12507179 -107777133 + AT_rich Low_complexity Low_complexity 1 46 0 1 680 1492 73 5 0 chr13 12507299 12507490 -107776822 + B2_Mm1a SINE B2 2 193 0 1 680 281 338 110 21 chr13 12509146 12509291 -107775021 + MER2B DNA MER2_type 176 333 -3 1 680 393 342 86 12 chr13 12509296 12509459 -107774853 - MER58A DNA MER1_type -49 175 1 1 680 263 254 27 27 chr13 12510118 12510191 -107774121 + B4 SINE B4 4 76 -216 1 680 25 51 0 0 chr13 12510660 12510699 -107773613 + AT_rich Low_complexity Low_complexity 1 39 0 2 680 337 128 67 133 chr13 12510803 12510893 -107773419 + RLTR25B LTR ERVK 426 509 -519 2 680 975 41 0 0 chr13 12510815 12510936 -107773376 + B1_Mus1 SINE Alu 28 148 0 2 680 795 278 96 5 chr13 12510945 12511144 -107773168 - Lx8 LINE L1 -141 7332 7116 2 680 431 308 39 0 chr13 12511280 12511410 -107772902 - Lx8 LINE L1 -522 6951 6817 2 680 278 273 207 9 chr13 12511419 12511530 -107772782 - ORR1D2 LTR MaLR -93 277 145 2 680 756 337 50 27 chr13 12511820 12512079 -107772233 + B4A SINE B4 21 285 -7 2 680 1146 189 9 19 chr13 12512188 12512398 -107771914 + B3 SINE B2 1 208 -8 2 680 911 98 8 8 chr13 12512656 12512789 -107771523 - B2_Mm1t SINE B2 -3 190 58 2 680 783 133 31 8 chr13 12513076 12513205 -107771107 - B1_Mur4 SINE Alu -18 132 1 2 680 277 326 21 21 chr13 12514691 12514785 -107769527 + BC1_Mm scRNA scRNA 6 99 -53 2 680 2332 176 145 12 chr13 12515184 12515667 -107768645 - RMER1B Other Other -11 1055 509 3 680 252 130 0 0 chr13 12515678 12515724 -107768588 + (T)n Simple_repeat Simple_repeat 1 46 0 3 680 276 343 0 0 chr13 12515725 12515792 -107768520 - ID4_ SINE ID -1 82 16 3 680 797 167 36 14 chr13 12517925 12518065 -107766247 - B1_Mur4 SINE Alu -6 144 2 3 680 498 122 299 0 chr13 12519905 12520012 -107764300 - B1_Mus1 SINE Alu -5 143 5 3 680 592 271 14 0 chr13 12520087 12520231 -107764081 + RSINE1 SINE B4 3 148 -17 3 680 279 0 0 0 chr13 12520237 12520268 -107764044 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 680 1096 73 0 0 chr13 12521521 12521657 -107762655 + B1_Mus1 SINE Alu 2 137 -11 3 680 311 208 191 86 chr13 12523011 12523116 -107761196 + PB1D10 SINE Alu 1 116 -1 3 680 213 271 114 0 chr13 12523655 12523725 -107760587 + B1F1 SINE Alu 34 111 -38 3 680 273 29 0 0 chr13 12524591 12524625 -107759687 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 680 262 254 45 0 chr13 12527024 12527091 -107757221 + ID4_ SINE ID 1 70 -13 4 680 401 276 23 0 chr13 12528273 12528360 -107755952 + B4A SINE B4 2 90 -202 4 680 691 218 207 0 chr13 12528367 12528546 -107755766 + B3 SINE B2 1 216 0 4 680 340 314 31 62 chr13 12528569 12528698 -107755614 + B4 SINE B4 164 288 -4 4 680 949 68 38 8 chr13 12528949 12529082 -107755230 + B2_Mm2 SINE B2 1 137 -58 4 680 663 13 0 0 chr13 12529088 12529164 -107755148 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 680 768 161 8 24 chr13 12529667 12529794 -107754518 - RSINE1 SINE B4 -39 126 2 4 680 387 0 0 0 chr13 12529810 12529853 -107754459 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 4 680 756 176 175 11 chr13 12533732 12533921 -107750391 + RMER10B LTR ERVL 1 220 -178 4 680 354 23 0 0 chr13 12533940 12533983 -107750329 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 680 535 271 125 28 chr13 12534795 12535011 -107749301 + B4A SINE B4 1 237 -55 5 680 1192 68 0 0 chr13 12535372 12535519 -107748793 + B1_Mus1 SINE Alu 2 148 0 5 680 5979 42 16 1 chr13 12535522 12536254 -107748058 + L1Md_F2 LINE L1 4843 5585 -298 5 680 8435 31 5 1 chr13 12536255 12537244 -107747068 + L1Md_F2 LINE L1 5587 6579 -3 5 680 645 254 136 24 chr13 12537276 12537445 -107746867 - B3A SINE B2 -10 188 1 5 680 261 0 0 0 chr13 12537451 12537480 -107746832 + (CTAAT)n Simple_repeat Simple_repeat 4 32 0 5 680 786 104 85 50 chr13 12537504 12537645 -107746667 - B1_Mm SINE Alu 0 147 2 5 680 1118 124 122 10 chr13 12538176 12538372 -107745940 + URR1B DNA MER1_type 2 219 -6 5 680 875 172 14 0 chr13 12538402 12538547 -107745765 + B1_Mus1 SINE Alu 2 148 0 5 680 710 253 162 12 chr13 12538881 12539121 -107745191 + B4A SINE B4 1 276 -16 5 680 1277 27 7 0 chr13 12539872 12540019 -107744293 - B1_Mus1 SINE Alu 0 148 1 5 680 450 114 0 0 chr13 12540944 12541014 -107743298 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 680 1417 69 16 21 chr13 12541255 12541448 -107742864 - B2_Mm2 SINE B2 -2 193 2 6 680 7807 70 10 6 chr13 12541469 12542733 -107741579 - L1_Mus1 LINE L1 -1 6566 5304 6 680 1226 41 0 0 chr13 12542733 12542879 -107741433 - B1_Mm SINE Alu 0 147 2 6 680 4728 104 3 23 chr13 12542879 12542977 -107741335 - L1_Mus1 LINE L1 -580 5303 5206 6 680 597 224 132 13 chr13 12544287 12544469 -107739843 + B4A SINE B4 1 222 -2 6 680 780 281 93 19 chr13 12544479 12544747 -107739565 + B4A SINE B4 5 292 0 6 680 303 254 14 27 chr13 12544793 12544866 -107739446 + B4A SINE B4 221 292 0 6 680 231 203 59 59 chr13 12545751 12545819 -107738493 + tRNA-Ala-GCA tRNA tRNA 1 68 -7 6 680 491 96 40 0 chr13 12546154 12546259 -107738053 + B1_Mus2 SINE Alu 1 115 -34 6 680 284 231 96 58 chr13 12546188 12546344 -107737968 + RLTR25B LTR ERVK 442 603 -425 6 680 244 300 26 52 chr13 12547338 12547454 -107736858 + MLT1J LTR MaLR 33 145 -367 6 680 1318 240 57 88 chr13 12547753 12548137 -107736175 + MTEa LTR MaLR 1 372 -7 7 680 900 138 27 14 chr13 12548320 12548467 -107735845 + B1_Mur3 SINE Alu 1 149 0 7 680 308 230 66 26 chr13 12548768 12548844 -107735468 - ID_B1 SINE B4 -66 158 80 7 680 252 288 64 81 chr13 12548984 12549208 -107735104 + MER68 LTR ERVL 310 518 -89 7 680 264 305 28 57 chr13 12549401 12549516 -107734796 + PB1D7 SINE Alu 1 120 0 7 680 483 184 22 0 chr13 12549894 12550030 -107734282 + (CA)n Simple_repeat Simple_repeat 2 140 0 7 680 365 274 17 42 chr13 12550705 12550823 -107733489 + PB1D10 SINE Alu 1 115 -2 7 680 975 77 0 15 chr13 12550825 12550957 -107733355 + B1_Mus1 SINE Alu 1 130 -18 7 680 189 107 0 0 chr13 12551085 12551113 -107733199 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 7 680 468 314 50 36 chr13 12551123 12551262 -107733050 + RSINE1 SINE B4 2 142 -23 7 680 306 0 0 0 chr13 12551281 12551315 -107732997 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 680 270 0 0 0 chr13 12551394 12551424 -107732888 + (A)n Simple_repeat Simple_repeat 1 30 0 8 680 1110 110 0 0 chr13 12551742 12551888 -107732424 - B1_Mus2 SINE Alu 0 147 2 8 680 1649 162 170 9 chr13 12552090 12552413 -107731899 + ORR1C1 LTR MaLR 4 378 0 8 680 282 236 30 23 chr13 12552444 12552566 -107731746 + ID4 SINE ID 25 144 -8 8 680 509 233 129 21 chr13 12553905 12554098 -107730214 + ID_B1 SINE B4 1 214 -10 8 680 2557 113 45 22 chr13 12554888 12555332 -107728980 + RMER16 LTR ERVK 1 533 0 8 680 203 295 114 23 chr13 12555511 12555643 -107728669 - L2c LINE L2 -315 3072 2929 8 680 366 23 0 0 chr13 12555724 12555767 -107728545 + (GA)n Simple_repeat Simple_repeat 2 44 0 8 680 901 154 42 0 chr13 12556141 12556284 -107728028 + B1_Mur4 SINE Alu 2 150 0 8 680 230 218 91 0 chr13 12556534 12556589 -107727723 + MER63B DNA AcHobo 377 436 0 9 680 1053 249 30 109 chr13 12556598 12556677 -107727635 - B4A SINE B4 -14 278 230 9 680 1145 35 13 46 chr13 12556677 12556829 -107727483 - B1_Mus1 SINE Alu 0 148 2 9 680 1053 249 30 109 chr13 12556829 12557051 -107727261 - B4A SINE B4 -63 229 1 9 680 506 260 78 83 chr13 12557448 12557476 -107726836 - B2_Mm2 SINE B2 -3 192 160 9 680 597 61 0 0 chr13 12557476 12557558 -107726754 + (TG)n Simple_repeat Simple_repeat 1 82 0 9 680 815 247 15 3 chr13 12557558 12557722 -107726590 - B3A SINE B2 -38 160 1 9 680 612 208 128 30 chr13 12558113 12558316 -107725996 - ID_B1 SINE B4 -1 223 1 9 680 396 0 0 0 chr13 12558400 12558444 -107725868 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 9 680 538 241 81 20 chr13 12558793 12558941 -107725371 + RSINE1 SINE B4 4 160 -5 9 680 787 179 105 0 chr13 12558969 12559131 -107725181 + B3 SINE B2 3 181 -35 9 680 2037 78 42 73 chr13 12559131 12559478 -107724834 + ORR1A3 LTR MaLR 1 374 0 9 680 403 123 7 58 chr13 12559763 12559901 -107724411 + (CACCC)n Simple_repeat Simple_repeat 3 133 0 1 680 1153 80 13 213 chr13 12560006 12560245 -107724067 - B2_Mm2 SINE B2 -4 191 1 1 680 567 236 39 8 chr13 12560267 12560395 -107723917 - B1F SINE Alu -8 141 10 1 680 407 229 140 19 chr13 12561112 12561219 -107723093 - PB1D7 SINE Alu 0 120 1 1 680 328 257 152 62 chr13 12561319 12561464 -107722848 - RSINE1 SINE B4 -3 162 5 1 680 359 221 16 16 chr13 12561476 12561605 -107722707 + C-rich Low_complexity Low_complexity 3 131 0 1 680 352 167 165 13 chr13 12562136 12562215 -107722097 + B4A SINE B4 2 92 -200 1 680 492 99 0 0 chr13 12562245 12562316 -107721996 + (TC)n Simple_repeat Simple_repeat 1 71 0 1 680 282 29 0 0 chr13 12562355 12562390 -107721922 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 680 623 253 34 12 chr13 12562446 12562619 -107721693 + ORR1E LTR MaLR 1 177 -217 1 680 701 273 0 0 chr13 12562799 12562942 -107721370 - RSINE1 SINE B4 -19 146 4 1 680 434 302 36 54 chr13 12563769 12563787 -107720525 + B4 SINE B4 128 147 -145 1 680 279 0 0 0 chr13 12563787 12563818 -107720494 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 680 434 302 36 54 chr13 12563818 12563967 -107720345 + B4 SINE B4 148 291 -1 1 680 839 309 83 15 chr13 12564574 12564840 -107719472 + B4 SINE B4 9 292 0 1 680 189 0 0 0 chr13 12565804 12565825 -107718487 + (A)n Simple_repeat Simple_repeat 1 21 0 1 680 225 0 0 0 chr13 12566315 12566340 -107717972 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 680 449 259 57 94 chr13 12566730 12566922 -107717390 + B3 SINE B2 2 186 -9 1 680 934 221 62 0 chr13 12567268 12567476 -107716836 - ID_B1 SINE B4 -2 222 2 1 680 210 118 0 0 chr13 12567500 12567534 -107716778 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 680 647 227 163 0 chr13 12567535 12567676 -107716636 - B3A SINE B2 -34 164 1 1 680 419 232 152 0 chr13 12568084 12568196 -107716116 + ID_B1 SINE B4 81 209 -15 1 680 609 193 198 33 chr13 12568378 12568560 -107715752 + B3 SINE B2 1 212 -4 1 680 715 236 60 42 chr13 12568918 12569086 -107715226 - B4 SINE B4 -52 240 70 1 680 913 251 76 8 chr13 12569194 12569443 -107714869 - B4A SINE B4 -1 291 26 1 680 838 303 21 21 chr13 12569501 12569791 -107714521 - B4A SINE B4 -2 290 1 1 680 238 204 106 58 chr13 12570406 12570510 -107713802 + LTR88c LTR Genie? 178 286 -576 1 680 351 0 0 0 chr13 12570960 12570999 -107713313 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 680 590 305 32 69 chr13 12571071 12571289 -107713023 - B4 SINE B4 0 292 83 1 680 374 226 203 25 chr13 12571320 12571438 -107712874 - B4 SINE B4 -69 223 85 1 680 238 167 0 23 chr13 12571449 12571492 -107712820 - B4 SINE B4 -249 43 2 1 680 930 191 138 10 chr13 12571511 12571707 -107712605 - URR1A DNA MER1_type 0 226 6 1 680 368 246 262 32 chr13 12571921 12572047 -107712265 - RSINE1 SINE B4 -9 156 2 1 680 212 231 19 19 chr13 12572660 12572713 -107711599 + B4A SINE B4 3 55 -237 1 680 374 309 147 15 chr13 12572794 12572991 -107711321 + B4A SINE B4 19 241 -51 1 680 778 171 39 0 chr13 12573048 12573177 -107711135 + B1_Mur2 SINE Alu 1 134 -15 1 680 229 132 0 0 chr13 12573521 12573559 -107710753 + B2_Mm2 SINE B2 1 38 -157 1 680 395 220 8 99 chr13 12573555 12573676 -107710636 + B3A SINE B2 89 198 0 1 680 316 244 0 24 chr13 12574002 12574086 -107710226 + ID4_ SINE ID 1 82 -1 1 680 1471 68 16 0 chr13 12574399 12574590 -107709722 + B2_Mm2 SINE B2 2 195 0 1 680 331 280 41 41 chr13 12574656 12574779 -107709533 - MER5B DNA MER1_type -48 130 8 1 680 238 320 0 26 chr13 12574898 12574975 -107709337 + ID4 SINE ID 2 76 -7 1 680 646 292 92 19 chr13 12575391 12575597 -107708715 + B4A SINE B4 7 227 -65 1 680 459 0 0 0 chr13 12575655 12575706 -107708606 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 680 351 0 0 0 chr13 12575917 12575956 -107708356 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 680 254 269 0 0 chr13 12576290 12576342 -107707970 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 680 879 254 77 66 chr13 12576343 12576630 -107707682 - B4A SINE B4 -2 290 1 1 680 1224 180 29 0 chr13 12576688 12576894 -107707418 - B3 SINE B2 -4 212 1 1 680 471 218 6 1 chr13 12577329 12577426 -107706886 + PB1D10 SINE Alu 1 101 -26 1 680 342 0 0 0 chr13 12577436 12577474 -107706838 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 680 368 143 14 0 chr13 12577879 12577949 -107706363 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 680 330 197 75 3 chr13 12578436 12578521 -107705791 + B1F SINE Alu 54 143 -6 1 680 512 251 21 86 chr13 12578817 12578892 -107705420 + ID SINE ID 2 75 -149 1 680 411 21 0 0 chr13 12578892 12578940 -107705372 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 1 680 512 251 21 86 chr13 12578940 12579051 -107705261 + ID_B1 SINE B4 76 176 -48 1 680 430 218 35 35 chr13 12578959 12579073 -107705239 + PB1D7 SINE Alu 6 119 -1 1 680 256 311 71 54 chr13 12579063 12579175 -107705137 + B4 SINE B4 76 189 -103 1 680 474 215 32 21 chr13 12579085 12579180 -107705132 + PB1D10 SINE Alu 9 104 -13 1 680 764 190 218 0 chr13 12579188 12579362 -107704950 + ID_B1 SINE B4 1 212 -12 1 680 233 270 95 0 chr13 12580500 12580563 -107703749 - PB1D7 SINE Alu -40 80 12 1 680 1115 81 0 51 chr13 12580584 12580740 -107703572 + B1_Mus1 SINE Alu 1 148 0 1 680 189 0 0 0 chr13 12580740 12580761 -107703551 + (A)n Simple_repeat Simple_repeat 1 21 0 1 680 284 194 81 0 chr13 12581132 12581194 -107703118 + RMER15 LTR ERVL 509 575 0 1 680 814 258 200 46 chr13 12581354 12581814 -107702498 + MT2A LTR ERVL 3 533 0 1 680 190 333 16 16 chr13 12582022 12582086 -107702226 + L2b LINE L2 3283 3346 -29 1 680 519 260 67 56 chr13 12582093 12582272 -107702040 + ID_B1 SINE B4 2 182 -42 1 10 737 331 69 23 chr13 12582406 12582925 -107701387 - L1M3 LINE L1 -1189 4951 4409 1 681 1438 85 5 0 chr13 12582931 12583119 -107701193 - B2_Mm1a SINE B2 -4 189 1 1 681 777 198 32 8 chr13 12583127 12583297 -107701015 - B3 SINE B2 -7 186 2 1 681 755 259 94 54 chr13 12583327 12583395 -107700917 - L1M3 LINE L1 -1761 4379 4321 1 681 1334 104 11 0 chr13 12583395 12583578 -107700734 - B2_Mm2 SINE B2 -9 186 2 1 681 755 259 94 54 chr13 12583578 12583860 -107700452 - L1M3 LINE L1 -1820 4320 4015 1 681 1222 43 0 0 chr13 12584472 12584612 -107699700 + B1_Mm SINE Alu 2 141 -6 1 681 345 47 0 0 chr13 12584614 12584657 -107699655 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 681 50 51 0 0 chr13 12584786 12584864 -107699448 + AT_rich Low_complexity Low_complexity 1 78 0 1 681 286 125 0 0 chr13 12584866 12584906 -107699406 + B1_Mus2 SINE Alu 1 40 -107 1 681 259 372 11 11 chr13 12584906 12584971 -107699341 - RMER12 LTR ERVK -486 836 772 1 681 647 78 98 0 chr13 12584971 12585073 -107699239 + ORR1B2 LTR MaLR 1 112 -255 1 681 253 337 45 65 chr13 12585076 12585098 -107699214 + YREP_Mm Unknown Unknown 133 153 -1659 1 681 359 266 13 0 chr13 12585098 12585177 -107699135 - ID4 SINE ID -2 81 2 1 681 253 337 45 65 chr13 12585177 12585198 -107699114 + YREP_Mm Unknown Unknown 154 243 -1569 1 681 570 254 43 7 chr13 12585198 12585337 -107698975 - B1F SINE Alu -5 144 1 1 681 253 337 45 65 chr13 12585337 12585354 -107698958 + YREP_Mm Unknown Unknown 244 328 -1484 1 681 732 174 43 115 chr13 12586071 12586279 -107698033 - B3 SINE B2 -2 193 1 1 681 245 75 25 0 chr13 12586295 12586335 -107697977 + (TTTTG)n Simple_repeat Simple_repeat 4 44 0 1 681 328 263 23 143 chr13 12586335 12586468 -107697844 - PB1D10 SINE Alu 0 117 1 1 681 22 0 0 0 chr13 12586479 12586501 -107697811 + AT_rich Low_complexity Low_complexity 1 22 0 1 681 255 327 109 35 chr13 12586502 12586676 -107697636 - B3A SINE B2 0 198 12 1 681 591 222 103 14 chr13 12586536 12586682 -107697630 - RSINE1 SINE B4 0 165 7 1 681 998 295 53 30 chr13 12587370 12587709 -107696603 + ORR1E LTR MaLR 7 353 -6 1 681 483 273 121 5 chr13 12588337 12588543 -107695769 + L1MC1 LINE L1 4548 4777 -1369 1 681 486 329 14 10 chr13 12588733 12588942 -107695370 - ID_B1 SINE B4 -13 211 2 1 681 706 285 76 58 chr13 12589615 12589958 -107694354 + L1MC1 LINE L1 4963 5311 -835 1 681 550 217 83 0 chr13 12589999 12590119 -107694193 + B3 SINE B2 83 212 -4 1 681 337 278 27 36 chr13 12590138 12590250 -107694062 + L1MC1 LINE L1 5316 5426 -907 1 681 1077 53 0 43 chr13 12590369 12590508 -107693804 + B1_Mus2 SINE Alu 4 136 -11 1 681 422 18 0 18 chr13 12590508 12590564 -107693748 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 1 681 1230 264 111 37 chr13 12591156 12591244 -107693068 + L1MC1 LINE L1 5737 5816 -517 1 681 200 34 0 33 chr13 12591244 12591274 -107693038 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 681 1230 264 111 37 chr13 12591274 12591728 -107692584 + L1MC1 LINE L1 5817 6319 -14 1 681 1196 48 0 14 chr13 12591989 12592136 -107692176 - B1_Mus2 SINE Alu -1 146 2 1 681 271 315 0 0 chr13 12592541 12592614 -107691698 - B4A SINE B4 -215 77 5 1 681 226 346 56 0 chr13 12592620 12592727 -107691585 - PB1D10 SINE Alu 0 117 5 1 681 816 320 75 10 chr13 12593105 12593411 -107690901 + LTR53 LTR ERVL 193 518 -1 1 681 272 211 86 62 chr13 12594193 12594274 -107690038 + ID4 SINE ID 1 83 0 1 681 234 0 0 0 chr13 12594274 12594300 -107690012 + (A)n Simple_repeat Simple_repeat 1 26 0 1 681 973 199 28 0 chr13 12594500 12594676 -107689636 - B3A SINE B2 -16 182 2 1 681 1282 21 7 0 chr13 12594710 12594855 -107689457 - B1_Mm SINE Alu 0 147 2 1 681 224 317 11 79 chr13 12594907 12594996 -107689316 - ID4 SINE ID 0 83 1 1 681 400 277 30 8 chr13 12595011 12595142 -107689170 - B1F SINE Alu -10 139 6 1 681 1279 257 75 3 chr13 12595330 12595662 -107688650 + MTEb LTR MaLR 20 375 -4 1 681 603 285 151 23 chr13 12596246 12596505 -107687807 - B4A SINE B4 0 292 1 2 681 213 39 0 0 chr13 12597264 12597290 -107687022 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 681 369 312 21 10 chr13 12597294 12597391 -107686921 - B4 SINE B4 -113 179 82 2 681 336 119 0 0 chr13 12597419 12597478 -107686834 + (TATG)n Simple_repeat Simple_repeat 4 62 0 2 681 223 191 32 0 chr13 12598400 12598463 -107685849 + CT-rich Low_complexity Low_complexity 2 66 0 2 681 1008 143 0 0 chr13 12598464 12598632 -107685680 + (TTC)n Simple_repeat Simple_repeat 1 168 0 2 681 595 148 105 135 chr13 12598633 12598766 -107685546 - B1_Mur4 SINE Alu -16 134 6 2 681 248 198 14 268 chr13 12598672 12598810 -107685502 - MT2B LTR ERVL -366 235 133 2 681 182 238 16 0 chr13 12599056 12599103 -107685209 + CT-rich Low_complexity Low_complexity 21 68 0 2 681 863 192 20 0 chr13 12599103 12599249 -107685063 - B1F SINE Alu 0 149 1 2 681 182 238 16 0 chr13 12599249 12599264 -107685048 + polypyrimidine Low_complexity Low_complexity 6 20 0 2 681 857 286 9 0 chr13 12600252 12600462 -107683850 - ID_B1 SINE B4 -9 215 4 2 681 204 255 0 0 chr13 12600850 12600897 -107683415 + A-rich Low_complexity Low_complexity 1 47 0 2 681 447 274 253 9 chr13 12601008 12601237 -107683075 - B4 SINE B4 -3 289 5 2 681 182 33 0 62 chr13 12601356 12601388 -107682924 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 2 681 709 217 61 61 chr13 12601416 12601558 -107682754 + B3A SINE B2 1 150 -48 2 681 270 56 0 0 chr13 12601558 12601594 -107682718 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 681 709 217 61 61 chr13 12601594 12601647 -107682665 + B3A SINE B2 151 196 -2 2 681 496 313 43 114 chr13 12601670 12601969 -107682343 + B4A SINE B4 3 280 -12 2 681 973 199 113 10 chr13 12602014 12602217 -107682095 - URR1B DNA MER1_type 0 225 2 2 681 376 134 167 24 chr13 12602271 12602355 -107681957 + PB1D10 SINE Alu 21 116 -1 2 681 1104 94 6 30 chr13 12602886 12603050 -107681262 + B2_Mm1t SINE B2 1 160 -33 2 681 648 137 0 0 chr13 12603050 12603145 -107681167 + B1_Mus2 SINE Alu 1 95 -52 2 681 701 256 69 0 chr13 12603215 12603418 -107680894 - ID_B1 SINE B4 -7 217 1 2 681 259 155 17 33 chr13 12603581 12603641 -107680671 + C-rich Low_complexity Low_complexity 2 60 0 2 681 230 231 14 71 chr13 12604318 12604388 -107679924 + MT2B LTR ERVL 195 260 -341 2 681 460 196 43 21 chr13 12604331 12604425 -107679887 + B1F SINE Alu 48 143 -6 2 681 807 19 67 0 chr13 12604965 12605069 -107679243 - B1_Mus2 SINE Alu -32 115 5 2 681 397 257 86 22 chr13 12605222 12605361 -107678951 + MER21B LTR ERV1 586 733 -130 2 681 1096 101 31 0 chr13 12605369 12605528 -107678784 - B2_Mm2 SINE B2 0 195 32 2 681 1035 123 0 0 chr13 12605528 12605691 -107678621 + (TTTC)n Simple_repeat Simple_repeat 3 165 0 2 681 851 39 0 0 chr13 12605691 12605794 -107678518 - B1_Mm SINE Alu -11 136 34 2 681 275 51 0 0 chr13 12605805 12605844 -107678468 - B2_Mm2 SINE B2 -155 40 2 2 681 317 24 0 23 chr13 12606289 12606332 -107677980 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 2 681 297 333 46 157 chr13 12606387 12606463 -107677849 - MLT1B LTR MaLR -214 253 177 2 681 653 263 0 55 chr13 12606463 12606628 -107677684 - RSINE1 SINE B4 -8 157 2 2 681 297 333 46 157 chr13 12606628 12606832 -107677480 - MLT1B LTR MaLR -284 183 4 2 681 218 299 29 15 chr13 12607587 12607655 -107676657 + PB1D9 SINE Alu 51 119 -1 2 681 233 231 83 97 chr13 12607629 12607701 -107676611 + ZP3AR Satellite Satellite 15 85 -127 2 681 358 244 0 58 chr13 12607659 12607729 -107676583 + ID4_ SINE ID 2 67 -16 2 681 306 0 0 0 chr13 12607729 12607763 -107676549 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 681 358 263 0 59 chr13 12607763 12607809 -107676503 + ID4_ SINE ID 68 111 -41 2 681 222 37 0 0 chr13 12608315 12608342 -107675970 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 681 1042 205 19 38 chr13 12608357 12608570 -107675742 + B3 SINE B2 1 209 -7 2 681 704 232 171 0 chr13 12608592 12608773 -107675539 + B3 SINE B2 5 216 0 2 681 267 31 0 0 chr13 12608863 12608895 -107675417 + (GA)n Simple_repeat Simple_repeat 1 32 0 2 681 297 237 0 33 chr13 12608902 12608963 -107675349 - tRNA-Ala-GCY_ tRNA tRNA -12 63 5 2 681 218 302 58 102 chr13 12609308 12609533 -107674779 - L2c LINE L2 -230 3157 2943 2 681 372 77 0 0 chr13 12610174 12610226 -107674086 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 681 250 310 0 0 chr13 12610263 12610321 -107673991 - B4A SINE B4 -8 284 227 2 681 1047 242 69 47 chr13 12610356 12610633 -107673679 - B4A SINE B4 -6 286 4 2 681 195 42 0 0 chr13 12611019 12611043 -107673269 + (T)n Simple_repeat Simple_repeat 1 24 0 2 681 701 79 10 0 chr13 12611987 12612088 -107672224 + (GAAA)n Simple_repeat Simple_repeat 2 103 0 2 681 205 269 0 29 chr13 12612340 12612409 -107671903 + CT-rich Low_complexity Low_complexity 2 68 0 2 681 208 139 0 0 chr13 12613034 12613070 -107671242 + (T)n Simple_repeat Simple_repeat 1 36 0 2 681 940 70 117 0 chr13 12613072 12613200 -107671112 - B1_Mus1 SINE Alu -4 144 2 2 681 24 67 0 0 chr13 12613222 12613267 -107671045 + AT_rich Low_complexity Low_complexity 1 45 0 2 681 445 287 103 0 chr13 12613303 12613439 -107670873 - B3A SINE B2 -47 151 2 2 681 217 213 85 0 chr13 12613593 12613640 -107670672 + ID4_ SINE ID 4 54 -29 2 681 271 308 21 32 chr13 12613621 12613637 -107670675 + ID SINE ID 67 81 -143 2 681 325 305 12 1 chr13 12613637 12613748 -107670564 + B1F1 SINE Alu 3 114 -6 2 681 269 271 149 37 chr13 12614281 12614415 -107669897 - RSINE1 SINE B4 0 165 17 2 681 938 34 8 0 chr13 12614420 12614538 -107669774 + (TCTCCC)n Simple_repeat Simple_repeat 3 121 0 2 681 254 120 160 0 chr13 12614574 12614624 -107669688 - PB1D7 SINE Alu -6 114 57 2 681 574 235 138 11 chr13 12614695 12614876 -107669436 - B3 SINE B2 -10 206 3 2 681 610 178 51 0 chr13 12614895 12615013 -107669299 - B1_Mus1 SINE Alu 0 148 25 2 681 565 174 34 25 chr13 12615417 12615535 -107668777 - PB1D9 SINE Alu 0 120 2 2 681 195 100 0 0 chr13 12615540 12615570 -107668742 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 2 681 591 291 0 14 chr13 12615577 12615720 -107668592 - B3A SINE B2 -30 168 28 2 681 547 265 13 50 chr13 12615764 12615923 -107668389 - RSINE1 SINE B4 -10 155 3 2 681 348 24 0 0 chr13 12616049 12616090 -107668222 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 681 486 268 174 47 chr13 12616116 12616181 -107668131 - B4A SINE B4 0 292 234 2 681 714 82 0 0 chr13 12616181 12616279 -107668033 + (TCCC)n Simple_repeat Simple_repeat 2 99 0 2 681 486 268 174 47 chr13 12616279 12616471 -107667841 - B4A SINE B4 -59 233 2 2 681 189 0 0 0 chr13 12616471 12616492 -107667820 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 681 507 195 136 16 chr13 12616542 12616667 -107667645 - ID_B1 SINE B4 -21 203 64 2 681 210 250 0 20 chr13 12616759 12616808 -107667504 + GA-rich Low_complexity Low_complexity 4 51 0 2 681 1367 187 80 19 chr13 12616895 12617313 -107666999 - Lx9 LINE L1 0 7644 7163 2 681 378 274 16 79 chr13 12617478 12617605 -107666707 - PB1 SINE Alu -7 120 2 2 681 461 256 99 15 chr13 12617655 12617786 -107666526 + B3A SINE B2 1 142 -56 2 681 231 36 0 0 chr13 12617933 12617961 -107666351 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2 681 251 329 0 12 chr13 12617994 12618074 -107666238 + PB1D10 SINE Alu 1 79 -38 2 681 371 269 145 41 chr13 12618448 12618669 -107665643 + RMER21B LTR ERV1 324 567 -275 2 681 505 190 40 24 chr13 12618723 12618847 -107665465 + ORR1D2 LTR MaLR 245 370 0 2 681 572 41 3 0 chr13 12618995 12619079 -107665233 + B1_Mus2 SINE Alu 52 137 -12 2 681 368 66 31 71 chr13 12619081 12619179 -107665133 + (GGGTG)n Simple_repeat Simple_repeat 3 96 0 2 681 462 75 11 121 chr13 12619301 12619392 -107664920 + RMER21B LTR ERV1 40 120 -722 2 681 477 250 189 19 chr13 12619476 12619688 -107664624 + RMER21B LTR ERV1 320 567 -275 2 681 568 212 184 181 chr13 12619812 12620187 -107664125 + MTE2a LTR MaLR 4 379 0 2 681 574 240 138 71 chr13 12620822 12621091 -107663221 - RMER21B LTR ERV1 -273 569 283 2 681 347 264 39 189 chr13 12621248 12621454 -107662858 - B4A SINE B4 -117 175 1 2 681 1184 126 166 4 chr13 12621539 12621786 -107662526 + RMER6A LTR ERVK 48 334 -422 2 681 1621 136 3 25 chr13 12621790 12622076 -107662236 + RMER6A LTR ERVK 477 756 0 2 681 681 256 73 92 chr13 12622077 12622404 -107661908 + ORR1E LTR MaLR 30 350 -9 2 681 3190 56 5 8 chr13 12622591 12622988 -107661324 + MTA_Mm LTR MaLR 1 396 0 2 681 7972 73 5 57 chr13 12622988 12624146 -107660166 + MTA_Mm-int LTR MaLR 1 1098 0 2 681 3261 51 10 0 chr13 12624146 12624538 -107659774 + MTA_Mm LTR MaLR 1 396 0 2 681 924 202 82 15 chr13 12624870 12625066 -107659246 - B3 SINE B2 -7 209 1 2 681 472 271 130 76 chr13 12625115 12625391 -107658921 - B4 SINE B4 0 292 2 2 681 539 231 0 0 chr13 12625541 12625649 -107658663 + B3 SINE B2 9 116 -100 2 681 273 281 0 111 chr13 12625720 12625738 -107658574 + MT2B LTR ERVL 154 159 -442 2 681 569 174 122 0 chr13 12625738 12625853 -107658459 + B1_Mus1 SINE Alu 4 132 -16 2 681 820 251 49 5 chr13 12626033 12626237 -107658075 - B3 SINE B2 -3 213 1 2 681 1868 185 108 5 chr13 12626279 12626659 -107657653 - MTD LTR MaLR 0 419 1 2 681 491 258 8 15 chr13 12627391 12627533 -107656779 + B1F1 SINE Alu 8 148 -1 2 681 933 211 10 26 chr13 12627767 12627962 -107656350 + B3A SINE B2 2 193 -5 2 681 656 284 108 3 chr13 12628162 12628448 -107655864 + L1MCa LINE L1 2040 2355 -4153 2 681 1157 76 0 0 chr13 12628450 12628594 -107655718 + B1_Mus2 SINE Alu 3 146 -1 2 681 561 217 59 44 chr13 12628676 12628811 -107655501 + B1_Mur2 SINE Alu 1 137 -12 2 681 192 48 47 23 chr13 12628813 12628856 -107655456 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 681 1157 62 7 0 chr13 12628858 12629004 -107655308 + B1_Mm SINE Alu 1 147 0 3 681 321 207 0 0 chr13 12629006 12629088 -107655224 + A-rich Low_complexity Low_complexity 1 82 0 3 681 2532 87 186 0 chr13 12629337 12629703 -107654609 - RLTR10C LTR ERVK -2 434 1 3 681 28 29 0 0 chr13 12629706 12629741 -107654571 + AT_rich Low_complexity Low_complexity 1 35 0 3 681 693 277 10 0 chr13 12629744 12629939 -107654373 + L1MCa LINE L1 2376 2572 -3749 2 681 918 309 17 17 chr13 12629949 12630236 -107654076 + B4 SINE B4 2 288 -4 3 681 716 280 68 5 chr13 12630537 12630756 -107653556 + B4A SINE B4 4 236 -56 3 681 360 0 0 0 chr13 12630786 12630826 -107653486 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 681 357 93 0 0 chr13 12630879 12630933 -107653379 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 681 486 208 10 10 chr13 12630965 12631067 -107653245 - RSINE1 SINE B4 -61 104 3 3 681 495 227 47 8 chr13 12631165 12631294 -107653018 + L1MCa LINE L1 2797 2930 -3391 2 681 740 233 83 16 chr13 12631304 12631496 -107652816 + B3 SINE B2 1 205 -11 3 681 375 80 39 26 chr13 12631496 12631573 -107652739 + (CATA)n Simple_repeat Simple_repeat 1 78 0 3 681 863 199 91 34 chr13 12632436 12632747 -107651565 + MTC LTR MaLR 37 420 -1 3 681 710 273 121 31 chr13 12632752 12633037 -107651275 - L1_Mur3 LINE L1 -670 5627 5254 3 681 1501 67 0 20 chr13 12633037 12633234 -107651078 - B2_Mm2 SINE B2 -1 194 2 3 681 710 278 106 31 chr13 12633234 12633555 -107650757 - L1_Mur3 LINE L1 -855 5288 4937 3 681 743 277 131 16 chr13 12633581 12633768 -107650544 + L1M2 LINE L1 4568 4778 -1365 3 681 213 39 0 0 chr13 12633768 12633794 -107650518 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 3 681 743 277 131 16 chr13 12633794 12633918 -107650394 + L1M2 LINE L1 4779 4915 -1228 3 681 738 300 12 15 chr13 12636000 12636236 -107648076 - B4 SINE B4 -41 251 13 3 681 382 297 49 115 chr13 12636980 12637284 -107647028 - B4A SINE B4 -7 285 2 3 681 1388 186 117 13 chr13 12637931 12638247 -107646065 + ORR1D1 LTR MaLR 3 351 -23 3 681 459 0 0 0 chr13 12638315 12638366 -107645946 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 681 871 277 108 8 chr13 12638405 12638663 -107645649 - B4A SINE B4 -8 284 1 3 681 313 297 39 0 chr13 12639120 12639147 -107645165 + ID_B1 SINE B4 53 115 -109 3 681 318 197 33 0 chr13 12639147 12639208 -107645104 + PB1D7 SINE Alu 1 63 -57 3 681 313 297 39 0 chr13 12639208 12639225 -107645087 + ID_B1 SINE B4 116 161 -63 3 681 336 64 0 0 chr13 12639228 12639275 -107645037 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 3 681 576 40 0 0 chr13 12639776 12639851 -107644461 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 681 2612 157 21 6 chr13 12640185 12640647 -107643665 - RMER5 LTR ERV1 0 534 66 3 681 502 218 94 47 chr13 12640647 12640739 -107643573 - RLTR20A2 LTR ERVK 0 578 478 3 681 294 29 0 0 chr13 12640739 12640774 -107643538 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 681 459 0 0 0 chr13 12640774 12640824 -107643488 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 681 502 218 94 47 chr13 12640824 12640879 -107643433 - RLTR20A2 LTR ERVK -101 477 424 3 681 420 247 0 0 chr13 12640894 12641048 -107643264 + (CCCA)n Simple_repeat Simple_repeat 4 157 0 3 681 279 281 56 0 chr13 12641059 12641148 -107643164 + L1M2 LINE L1 5614 5707 -605 3 681 478 261 0 67 chr13 12641314 12641448 -107642864 + ID_B1 SINE B4 86 206 -18 3 681 716 115 122 8 chr13 12641482 12641613 -107642699 - B1_Mur4 SINE Alu -4 146 1 3 681 325 197 0 0 chr13 12641904 12641965 -107642347 + 5S rRNA rRNA 60 120 -1 3 681 898 194 15 35 chr13 12642041 12642097 -107642215 + RMER1B Other Other 868 921 -145 3 681 189 0 0 0 chr13 12642097 12642118 -107642194 + (TGG)n Simple_repeat Simple_repeat 1 21 0 3 681 898 194 15 35 chr13 12642118 12642264 -107642048 + RMER1B Other Other 922 1066 0 3 681 750 301 40 4 chr13 12642265 12642512 -107641800 + B4 SINE B4 24 279 -13 3 681 417 167 0 0 chr13 12642656 12642728 -107641584 + RSINE1 SINE B4 47 118 -47 3 681 725 75 234 70 chr13 12642800 12642958 -107641354 + B2_Mm2 SINE B2 2 185 -10 3 681 182 91 30 0 chr13 12643307 12643340 -107640972 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 3 681 520 329 191 0 chr13 12644238 12644469 -107639843 - B4 SINE B4 -12 280 6 3 681 748 222 65 0 chr13 12644803 12644956 -107639356 + ID_B1 SINE B4 3 165 -59 3 681 302 293 58 39 chr13 12644879 12644982 -107639330 + B1F1 SINE Alu 8 112 -37 3 681 324 0 0 0 chr13 12645039 12645075 -107639237 + (TATG)n Simple_repeat Simple_repeat 1 36 0 3 681 2137 189 2 22 chr13 12645135 12645547 -107638765 + MTB_Mm LTR MaLR 4 407 0 3 681 417 20 0 0 chr13 12645608 12645658 -107638654 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 681 2028 210 72 14 chr13 12645773 12646271 -107638041 - RLTR11A2 LTR ERVK 0 527 1 3 681 218 196 39 0 chr13 12646336 12646387 -107637925 + B1F SINE Alu 2 54 -95 3 681 925 153 380 42 chr13 12646591 12646878 -107637434 + ORR1C2 LTR MaLR 1 384 0 3 681 801 278 9 130 chr13 12647794 12648125 -107636187 - B4A SINE B4 0 292 2 3 681 268 277 171 65 chr13 12648379 12648549 -107635763 + MIR SINE MIR 10 197 -65 3 681 1169 202 10 0 chr13 12648602 12648810 -107635502 + B3 SINE B2 2 211 -5 3 681 472 194 87 0 chr13 12649151 12649254 -107635058 - B3 SINE B2 -96 120 9 3 681 1266 75 11 17 chr13 12649409 12649586 -107634726 - B2_Mm2 SINE B2 -18 177 2 3 681 328 313 19 39 chr13 12649622 12649725 -107634587 - ID_B1 SINE B4 -114 110 10 3 681 21 0 0 0 chr13 12649748 12649769 -107634543 + AT_rich Low_complexity Low_complexity 1 21 0 3 681 360 0 0 0 chr13 12649775 12649815 -107634497 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 681 605 246 101 0 chr13 12649817 12649955 -107634357 - B3A SINE B2 -46 152 1 3 681 282 319 40 40 chr13 12650461 12650611 -107633701 - L2a LINE L2 0 3426 3277 3 681 276 327 16 120 chr13 12650635 12650733 -107633579 - MLT1A0 LTR MaLR -147 218 131 3 681 1322 167 5 0 chr13 12650733 12650943 -107633369 - B3 SINE B2 -5 211 1 3 681 276 327 16 120 chr13 12650943 12651028 -107633284 - MLT1A0 LTR MaLR -235 130 54 3 681 1124 286 39 0 chr13 12651082 12651390 -107632922 - MTEa LTR MaLR -21 358 39 3 681 538 250 28 35 chr13 12651507 12651648 -107632664 + B1F SINE Alu 10 149 0 3 681 266 303 13 0 chr13 12651649 12651725 -107632587 + ID4 SINE ID 7 83 0 3 681 255 31 0 0 chr13 12652109 12652141 -107632171 + (A)n Simple_repeat Simple_repeat 1 32 0 3 681 282 201 74 30 chr13 12652660 12652796 -107631516 + B3 SINE B2 16 216 0 3 681 680 51 88 9 chr13 12653437 12653755 -107630557 + (TG)n Simple_repeat Simple_repeat 1 343 0 3 681 439 224 204 12 chr13 12653755 12653922 -107630390 - B4A SINE B4 -11 281 83 3 681 270 258 32 21 chr13 12653973 12654068 -107630244 + PB1D10 SINE Alu 1 96 -21 3 681 221 137 0 73 chr13 12654084 12654139 -107630173 + B2_Mm2 SINE B2 2 52 -143 3 681 533 237 38 0 chr13 12654221 12654352 -107629960 + ORR1E LTR MaLR 1 136 -223 3 681 321 165 50 0 chr13 12654352 12654473 -107629839 + (TG)n Simple_repeat Simple_repeat 2 128 0 3 681 183 42 0 0 chr13 12654531 12654555 -107629757 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 681 236 189 151 0 chr13 12654691 12654744 -107629568 + ORR1E LTR MaLR 312 372 -7 3 681 1017 60 0 0 chr13 12655080 12655213 -107629099 + (GAAA)n Simple_repeat Simple_repeat 4 136 0 3 681 212 287 21 21 chr13 12655224 12655320 -107628992 + PB1D10 SINE Alu 1 96 -21 3 681 817 234 60 5 chr13 12655330 12655515 -107628797 + B3A SINE B2 1 195 -3 3 681 460 235 0 0 chr13 12655539 12655620 -107628692 + ID4_ SINE ID 2 82 -1 3 681 465 19 0 0 chr13 12655709 12655763 -107628549 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 681 662 258 189 3 chr13 12656922 12657295 -107627017 + MLT1D LTR MaLR 64 505 0 3 681 200 282 94 0 chr13 12657348 12657433 -107626879 - MIRb SINE MIR -11 257 165 3 681 441 245 31 117 chr13 12659402 12659564 -107624748 + B1F1 SINE Alu 1 148 -1 3 681 418 265 249 50 chr13 12661311 12661649 -107622663 + MER47B DNA MER2_type 13 417 -1 3 681 376 349 70 0 chr13 12661812 12661941 -107622371 + ID_B1 SINE B4 81 218 -6 3 681 314 322 67 17 chr13 12663032 12663212 -107621100 + L1M5 LINE L1 5516 5704 -536 3 681 565 315 93 54 chr13 12663250 12663625 -107620687 - MLT1D LTR MaLR 0 505 108 3 681 986 69 54 0 chr13 12663625 12663755 -107620557 + B1_Mus1 SINE Alu 2 138 -10 3 681 266 0 0 29 chr13 12663755 12663790 -107620522 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 681 565 315 93 54 chr13 12663790 12663822 -107620490 - MLT1D LTR MaLR -398 107 82 3 681 402 250 179 57 chr13 12663863 12664003 -107620309 - RSINE1 SINE B4 -6 159 3 3 681 571 255 198 20 chr13 12664497 12664745 -107619567 - B4A SINE B4 0 292 1 3 681 721 159 98 0 chr13 12664843 12664975 -107619337 - B1_Mus2 SINE Alu 0 147 3 3 681 226 318 30 0 chr13 12664996 12665062 -107619250 + (CATG)n Simple_repeat Simple_repeat 1 68 0 3 681 459 292 110 77 chr13 12665353 12665557 -107618755 - L1MD2 LINE L1 -25 6334 6128 3 681 950 138 7 0 chr13 12665557 12665702 -107618610 - B1_Mus1 SINE Alu -2 146 1 3 681 459 292 110 77 chr13 12665702 12665823 -107618489 - L1MD2 LINE L1 -232 6127 5998 3 681 488 287 33 7 chr13 12665926 12666077 -107618235 - RSINE1 SINE B4 -1 164 10 3 681 595 302 24 59 chr13 12666785 12666954 -107617358 - RSINE1 SINE B4 0 165 3 3 681 362 308 143 69 chr13 12669534 12669953 -107614359 - L2a LINE L2 -58 3368 2919 3 681 1402 82 75 33 chr13 12669964 12670178 -107614134 + L1Md_F2 LINE L1 6360 6582 0 3 681 1245 34 0 13 chr13 12671855 12672004 -107612308 - B1_Mus1 SINE Alu 0 148 2 3 681 529 316 56 0 chr13 12672302 12672498 -107611814 + B3 SINE B2 2 208 -8 3 681 267 259 124 41 chr13 12673471 12673616 -107610696 - L1M5 LINE L1 -489 5751 5595 3 681 591 78 2 183 chr13 12674063 12674200 -107610112 - B1_Mur4 SINE Alu 0 150 40 4 681 320 94 19 0 chr13 12674913 12674966 -107609346 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 681 356 343 0 18 chr13 12675212 12675322 -107608990 + PB1D10 SINE Alu 3 110 -7 4 681 475 328 91 4 chr13 12676005 12676235 -107608077 - MIRb SINE MIR -14 254 5 4 681 1157 55 0 7 chr13 12676694 12676842 -107607470 - B1_Mus2 SINE Alu 0 147 1 4 681 1176 225 111 3 chr13 12676842 12677176 -107607136 - ORR1D1 LTR MaLR 0 374 5 4 681 242 315 0 126 chr13 12677459 12677475 -107606837 + PB1D10 SINE Alu 2 112 -5 4 681 334 271 126 36 chr13 12677475 12677586 -107606726 + ID_B1 SINE B4 99 219 -5 4 681 385 261 57 50 chr13 12677712 12677853 -107606459 + B4A SINE B4 2 143 -149 4 681 304 261 11 64 chr13 12677825 12677919 -107606393 + RSINE1 SINE B4 76 164 -1 4 681 934 121 50 0 chr13 12678053 12678194 -107606118 - B1_Mur3 SINE Alu 0 149 2 4 681 607 216 21 41 chr13 12678220 12678357 -107605955 - B1_Mur4 SINE Alu -1 149 14 4 681 2157 159 35 14 chr13 12678357 12678727 -107605585 - ORR1C1 LTR MaLR 0 378 1 4 681 207 0 0 0 chr13 12678752 12678775 -107605537 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 681 560 219 122 0 chr13 12678792 12678915 -107605397 + B1_Mm SINE Alu 5 142 -5 4 681 232 309 53 0 chr13 12680579 12680673 -107603639 - MER58B DNA MER1_type -16 325 227 4 681 219 279 147 0 chr13 12680926 12680994 -107603318 - ID4 SINE ID -4 79 2 4 681 281 207 11 0 chr13 12681160 12681247 -107603065 + (TA)n Simple_repeat Simple_repeat 2 89 0 4 681 960 200 49 0 chr13 12681357 12681542 -107602770 + B3 SINE B2 4 197 -19 4 681 806 156 50 34 chr13 12681879 12682058 -107602254 + U17 snRNA snRNA 26 207 0 4 681 25 31 0 0 chr13 12682085 12682117 -107602195 + AT_rich Low_complexity Low_complexity 1 32 0 4 681 1145 68 7 0 chr13 12682522 12682668 -107601644 + B1_Mus1 SINE Alu 1 147 -1 4 681 1235 160 14 0 chr13 12683492 12683705 -107600607 - URR1B DNA MER1_type -3 222 7 4 681 313 256 98 16 chr13 12685399 12685522 -107598790 - B1F2 SINE Alu -16 133 1 4 681 198 71 0 0 chr13 12686236 12686264 -107598048 + (C)n Simple_repeat Simple_repeat 1 28 0 4 681 697 48 276 0 chr13 12686264 12686369 -107597943 - B1_Mus1 SINE Alu -13 135 2 4 681 22 0 0 0 chr13 12687609 12687631 -107596681 + AT_rich Low_complexity Low_complexity 1 22 0 4 681 498 149 0 0 chr13 12688660 12688747 -107595565 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 681 797 254 11 0 chr13 12690388 12690565 -107593747 + B3 SINE B2 30 208 -8 4 681 318 26 0 0 chr13 12690682 12690721 -107593591 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 681 936 38 0 44 chr13 12690898 12691035 -107593277 + B1_Mus2 SINE Alu 15 145 -2 4 681 398 20 20 0 chr13 12691035 12691086 -107593226 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 4 681 1639 113 50 65 chr13 12692923 12693246 -107591066 - ORR1A3 LTR MaLR -8 318 1 4 681 1151 245 47 25 chr13 12693478 12693800 -107590512 + Lx3C LINE L1 6646 6974 -2 4 681 23 33 0 0 chr13 12693896 12693926 -107590386 + AT_rich Low_complexity Low_complexity 1 30 0 4 681 21 36 0 0 chr13 12694495 12694523 -107589789 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 208 211 39 0 chr13 12694675 12694727 -107589585 + T-rich Low_complexity Low_complexity 2 55 0 4 681 741 92 49 24 chr13 12694745 12694868 -107589444 - B1_Mus1 SINE Alu -22 126 1 4 681 8425 37 6 3 chr13 12694876 12696025 -107588287 - L1Md_F2 LINE L1 0 6582 5430 4 681 286 124 33 22 chr13 12696190 12696281 -107588031 + (TG)n Simple_repeat Simple_repeat 1 92 0 4 681 360 263 21 0 chr13 12696382 12696477 -107587835 - B3A SINE B2 -39 159 63 4 681 470 250 8 43 chr13 12696824 12696941 -107587371 + PB1D10 SINE Alu 2 114 -3 4 681 1477 63 11 0 chr13 12697258 12697447 -107586865 + B2_Mm1t SINE B2 2 192 -1 4 681 1288 64 11 23 chr13 12698158 12698317 -107585995 + B2_Mm1a SINE B2 2 162 -31 4 681 189 94 0 0 chr13 12698317 12698349 -107585963 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 4 681 1288 64 11 23 chr13 12698349 12698364 -107585948 + B2_Mm1a SINE B2 163 174 -19 4 681 615 214 28 21 chr13 12698685 12698828 -107585484 - B1_Mur4 SINE Alu -6 144 1 4 681 21 36 0 0 chr13 12700185 12700213 -107584099 + AT_rich Low_complexity Low_complexity 1 28 0 4 681 3077 166 131 31 chr13 12703247 12703957 -107580355 + RLTR40 LTR ERVK 37 817 0 4 681 647 247 99 31 chr13 12704098 12704290 -107580022 - ID_B1 SINE B4 -15 209 5 4 681 1126 55 0 40 chr13 12704457 12704607 -107579705 + B1_Mus2 SINE Alu 4 147 0 4 681 213 88 0 0 chr13 12708352 12708371 -107575941 + (A)n Simple_repeat Simple_repeat 1 19 0 4 681 1167 41 0 13 chr13 12708371 12708520 -107575792 + B1_Mm SINE Alu 1 147 0 4 681 213 88 0 0 chr13 12708520 12708534 -107575778 + (A)n Simple_repeat Simple_repeat 1 14 0 4 681 29 0 0 0 chr13 12708534 12708563 -107575749 + AT_rich Low_complexity Low_complexity 1 29 0 4 681 314 255 398 7 chr13 12710237 12710382 -107573930 - ID_B1 SINE B4 -16 208 6 4 681 328 269 86 9 chr13 12710636 12710741 -107573571 + PB1D7 SINE Alu 1 113 -7 4 681 1344 72 65 16 chr13 12711336 12711520 -107572792 - B2_Mm2 SINE B2 -1 194 2 4 681 814 235 91 10 chr13 12711543 12711741 -107572571 - ID_B1 SINE B4 -9 215 2 4 681 24 0 0 0 chr13 12713174 12713198 -107571114 + AT_rich Low_complexity Low_complexity 1 24 0 4 85 254 340 101 20 chr13 12713905 12714004 -107570308 - B4 SINE B4 -184 108 2 4 682 946 119 6 48 chr13 12714400 12714567 -107569745 + B2_Mm1a SINE B2 1 160 -33 4 682 288 0 0 0 chr13 12714567 12714599 -107569713 + (CAAT)n Simple_repeat Simple_repeat 2 33 0 4 682 1169 62 7 0 chr13 12714819 12714964 -107569348 - B1_Mus1 SINE Alu -1 147 2 4 682 395 212 107 33 chr13 12715738 12715860 -107568452 + B1F SINE Alu 11 141 -8 4 682 238 246 138 0 chr13 12715875 12715940 -107568372 + ID2 SINE ID 5 78 -5 4 682 255 281 205 19 chr13 12716812 12716917 -107567395 + MER2 DNA MER2_type 4 125 -220 4 682 2155 149 48 48 chr13 12716917 12717311 -107567001 + ORR1B1 LTR MaLR 1 394 0 4 682 255 281 205 19 chr13 12717311 12717361 -107566951 + MER2 DNA MER2_type 126 188 -157 4 682 729 0 0 0 chr13 12717969 12718050 -107566262 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 682 639 273 81 24 chr13 12718087 12718297 -107566015 + ID_B1 SINE B4 2 223 -1 4 682 802 176 93 1 chr13 12719438 12719617 -107564695 - ORR1C2 LTR MaLR -1 393 201 4 682 506 253 216 9 chr13 12720143 12720370 -107563942 + B4A SINE B4 1 274 -18 4 682 539 226 9 0 chr13 12720400 12720506 -107563806 + ID_B1 SINE B4 93 199 -25 4 682 641 273 53 5 chr13 12721247 12721406 -107562906 + B3A SINE B2 1 164 -34 4 682 354 123 0 0 chr13 12721406 12721463 -107562849 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 682 641 273 53 5 chr13 12721463 12721491 -107562821 + B3A SINE B2 165 197 -1 4 682 461 287 70 32 chr13 12721542 12721729 -107562583 - MER2 DNA MER2_type 0 345 152 4 682 693 263 39 0 chr13 12721755 12721911 -107562401 - RSINE1 SINE B4 -1 164 3 4 682 372 302 87 0 chr13 12722163 12722289 -107562023 - B1F SINE Alu -11 138 2 4 682 297 233 50 0 chr13 12722540 12722600 -107561712 - ID SINE ID -153 71 9 4 682 387 0 0 0 chr13 12722724 12722767 -107561545 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 682 287 282 146 0 chr13 12723121 12723231 -107561081 + B1F SINE Alu 24 149 0 4 682 395 275 0 0 chr13 12723235 12723315 -107560997 + ID4_ SINE ID 3 82 -1 4 682 207 276 52 13 chr13 12723763 12723840 -107560472 - L2c LINE L2 -69 3318 3239 4 682 181 143 31 138 chr13 12723933 12723998 -107560314 - MIR SINE MIR -110 98 41 4 682 339 25 0 0 chr13 12724497 12724537 -107559775 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 682 516 267 150 0 chr13 12724545 12724665 -107559647 - RSINE1 SINE B4 -25 140 3 4 682 257 256 81 11 chr13 12724676 12724763 -107559549 + MER103 DNA DNA 54 146 -20 4 682 1236 77 47 0 chr13 12724917 12725087 -107559225 + B2_Mm1t SINE B2 2 179 -14 4 682 382 212 162 46 chr13 12725087 12725223 -107559089 + B2_Mm2 SINE B2 2 150 -45 4 682 1205 43 0 0 chr13 12725223 12725363 -107558949 + B1_Mm SINE Alu 1 140 -7 4 682 382 212 162 46 chr13 12725363 12725399 -107558913 + B2_Mm2 SINE B2 151 193 -2 4 682 2272 120 20 8 chr13 12725818 12726171 -107558141 + RLTR15 LTR ERVK 3 359 0 4 682 225 0 0 0 chr13 12726550 12726575 -107557737 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 682 331 274 231 0 chr13 12727319 12727505 -107556807 + L1MB8 LINE L1 5941 6169 -9 4 682 207 0 0 0 chr13 12727508 12727531 -107556781 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 682 4988 186 44 44 chr13 12727913 12728979 -107555333 + Lx6 LINE L1 6218 7283 -177 4 682 420 250 26 18 chr13 12729079 12729193 -107555119 + Lx7 LINE L1 7206 7320 -376 4 682 1262 34 0 13 chr13 12729427 12729576 -107554736 + B1_Mus2 SINE Alu 1 147 0 4 682 1618 123 239 3 chr13 12729589 12729890 -107554422 + ORR1C2 LTR MaLR 13 384 0 4 682 921 114 8 8 chr13 12730111 12730244 -107554068 - B1_Mus1 SINE Alu -10 138 6 4 682 422 269 44 108 chr13 12730244 12730269 -107554043 - B4 SINE B4 -76 216 69 4 682 340 250 33 67 chr13 12730325 12730445 -107553867 - PB1D9 SINE Alu 0 120 5 4 682 1208 68 7 0 chr13 12730515 12730662 -107553650 + B1_Mus1 SINE Alu 1 148 0 5 682 245 289 53 0 chr13 12730677 12730753 -107553559 + PB1D7 SINE Alu 41 120 0 5 682 376 195 45 22 chr13 12731436 12731525 -107552787 + PB1 SINE Alu 30 120 -7 5 682 1182 76 0 0 chr13 12731895 12732040 -107552272 + B1_Mus2 SINE Alu 2 146 -1 5 682 378 0 0 0 chr13 12732208 12732250 -107552062 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 682 1028 248 22 70 chr13 12732293 12732566 -107551746 - B4A SINE B4 -31 261 2 5 682 1458 137 18 0 chr13 12732714 12732933 -107551379 - URR1B DNA MER1_type -2 223 1 5 682 262 326 84 16 chr13 12733131 12733315 -107550997 + MIR SINE MIR 23 214 -48 5 682 438 231 38 9 chr13 12734024 12734129 -107550183 + B1F1 SINE Alu 1 108 -41 5 682 246 32 0 0 chr13 12734856 12734887 -107549425 + (A)n Simple_repeat Simple_repeat 1 31 0 5 682 279 254 13 53 chr13 12735100 12735175 -107549137 - ID4 SINE ID -11 72 1 5 682 340 288 0 53 chr13 12735185 12735317 -107548995 - PB1 SINE Alu -2 125 1 5 682 382 292 53 23 chr13 12735436 12735569 -107548743 + B1_Mur3 SINE Alu 7 143 -6 5 682 232 266 49 25 chr13 12735583 12735664 -107548648 + ID4_ SINE ID 1 83 0 5 682 383 344 39 32 chr13 12736009 12736165 -107548147 + MER58C DNA MER1_type 1 157 -58 5 682 378 278 14 137 chr13 12737011 12737157 -107547155 + B1F SINE Alu 10 137 -12 5 682 465 50 0 0 chr13 12737157 12737217 -107547095 + (CAAAA)n Simple_repeat Simple_repeat 3 62 0 5 682 341 58 0 19 chr13 12737328 12737381 -107546931 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 682 219 114 0 0 chr13 12737505 12737540 -107546772 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 682 351 0 0 0 chr13 12739405 12739444 -107544868 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 682 290 290 64 18 chr13 12739826 12739837 -107544475 - B4A SINE B4 -92 200 87 5 682 494 255 0 0 chr13 12739837 12739935 -107544377 - PB1D7 SINE Alu -21 99 2 5 682 213 39 0 0 chr13 12739945 12739971 -107544341 + (T)n Simple_repeat Simple_repeat 1 26 0 5 682 1142 88 0 0 chr13 12739971 12740118 -107544194 - B1_Mus2 SINE Alu 0 147 1 5 682 519 220 0 20 chr13 12740864 12740966 -107543346 - PB1D7 SINE Alu -19 101 2 5 682 591 301 14 10 chr13 12740968 12741137 -107543175 - ID_B1 SINE B4 -38 254 80 5 682 926 150 97 57 chr13 12743793 12744113 -107540199 + RMER6B LTR ERVK 69 461 0 5 682 362 189 200 0 chr13 12744657 12744747 -107539565 - B1_Mur2 SINE Alu -1 148 41 5 682 349 383 48 26 chr13 12745029 12745297 -107539015 - MLT1J LTR MaLR -194 318 45 5 682 505 255 30 60 chr13 12745277 12745444 -107538868 + MTEa LTR MaLR 218 379 0 5 682 4499 14 2 0 chr13 12745449 12745941 -107538371 + MT2_Mm LTR ERVL 1 493 0 5 682 46079 15 7 0 chr13 12745941 12751266 -107533046 + MERVL-int LTR ERVL 1 5360 -125 5 682 399 167 46 35 chr13 12751266 12751353 -107532959 + ORR1A3-int LTR MaLR 553 640 -1323 5 682 305 0 0 0 chr13 12751353 12751391 -107532921 + MERVL-int LTR ERVL 5448 5485 0 5 682 4499 14 2 0 chr13 12751391 12751883 -107532429 + MT2_Mm LTR ERVL 1 493 0 5 682 311 331 11 28 chr13 12752383 12752560 -107531752 + (CACCAT)n Simple_repeat Simple_repeat 4 177 0 5 682 970 250 184 62 chr13 12752678 12753032 -107531280 + MTD LTR MaLR 1 397 -22 5 682 385 288 83 62 chr13 12753095 12753336 -107530976 - ORR1E LTR MaLR 0 359 114 5 682 1047 95 0 0 chr13 12753784 12753921 -107530391 + B1_Mus1 SINE Alu 2 138 -10 5 682 243 0 0 0 chr13 12753921 12753948 -107530364 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 682 225 360 82 38 chr13 12754148 12754307 -107530005 - MLT1K LTR MaLR -105 490 325 5 682 1152 75 7 0 chr13 12754370 12754516 -107529796 - B1_Mus1 SINE Alu -1 147 1 5 682 657 249 4 54 chr13 12754992 12755229 -107529083 + B4A SINE B4 1 213 -79 5 682 1204 61 0 0 chr13 12755341 12755488 -107528824 - B1_Mus2 SINE Alu 0 147 1 5 682 180 0 0 0 chr13 12755565 12755585 -107528727 + (TTA)n Simple_repeat Simple_repeat 2 21 0 5 682 606 218 89 0 chr13 12755588 12755712 -107528600 - B1_Mur3 SINE Alu -14 135 1 5 682 806 289 84 42 chr13 12755731 12756041 -107528271 - ORR1E LTR MaLR -36 323 1 5 682 684 211 82 15 chr13 12756561 12756696 -107527616 + B1_Mur1 SINE Alu 6 149 0 5 682 1044 199 86 5 chr13 12757066 12757263 -107527049 - B3 SINE B2 -3 213 1 5 682 232 269 14 29 chr13 12757337 12757406 -107526906 + GA-rich Low_complexity Low_complexity 3 70 0 5 682 303 104 0 0 chr13 12757416 12757464 -107526848 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 5 682 648 215 0 0 chr13 12757545 12757652 -107526660 - B1F SINE Alu -40 109 3 5 682 183 42 0 0 chr13 12757652 12757676 -107526636 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 682 294 286 83 37 chr13 12757676 12757785 -107526527 - PB1D10 SINE Alu -3 114 1 5 682 892 224 103 14 chr13 12758328 12758541 -107525771 + 7SK RNA RNA 8 239 -92 5 682 597 292 0 0 chr13 12758786 12758923 -107525389 + ID_B1 SINE B4 81 217 -7 5 682 2026 141 19 0 chr13 12759722 12760034 -107524278 + ORR1A3 LTR MaLR 1 318 -8 5 682 269 254 18 0 chr13 12760359 12760414 -107523898 + B4A SINE B4 1 56 -236 5 682 420 37 0 0 chr13 12760415 12760469 -107523843 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 682 264 213 84 53 chr13 12760612 12760696 -107523616 - PB1D10 SINE Alu 0 120 31 5 682 394 231 11 32 chr13 12760733 12760827 -107523485 - PB1D10 SINE Alu -2 115 24 5 682 298 280 213 9 chr13 12761460 12761568 -107522744 - B4 SINE B4 -97 195 66 5 682 186 43 0 0 chr13 12762253 12762276 -107522036 + (TATG)n Simple_repeat Simple_repeat 1 23 0 5 682 223 93 47 0 chr13 12762279 12762322 -107521990 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 5 682 301 342 60 33 chr13 12762353 12762504 -107521808 - HAL1-3A_ME LINE L1 -420 2438 2284 5 682 313 259 26 18 chr13 12762510 12762610 -107521702 + CT-rich Low_complexity Low_complexity 19 118 0 5 682 567 211 9 17 chr13 12762610 12762726 -107521586 - PB1D9 SINE Alu -5 115 1 5 682 313 259 26 18 chr13 12762726 12762739 -107521573 + polypyrimidine Low_complexity Low_complexity 5 18 0 5 682 277 305 23 58 chr13 12763764 12763851 -107520461 + RSINE1 SINE B4 82 165 0 5 682 342 286 58 70 chr13 12763857 12764098 -107520214 - RMER17A2 LTR ERVK -511 395 158 5 682 534 320 11 49 chr13 12764228 12764392 -107519920 + ID_B1 SINE B4 68 229 -63 5 682 287 235 0 0 chr13 12764403 12764471 -107519841 + ID_B1 SINE B4 100 167 -57 5 682 413 224 108 33 chr13 12764491 12764611 -107519701 + Lx8 LINE L1 6989 7117 -356 5 682 2467 168 145 93 chr13 12764644 12765287 -107519025 + RMER6C LTR ERVK 15 690 0 5 682 202 118 0 29 chr13 12766241 12766276 -107518036 + MIR SINE MIR 98 131 -77 5 682 242 106 21 0 chr13 12766317 12766364 -107517948 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 682 387 60 0 0 chr13 12766371 12766421 -107517891 + (TTCC)n Simple_repeat Simple_repeat 4 53 0 5 682 222 37 0 0 chr13 12766562 12766589 -107517723 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 682 1163 78 0 0 chr13 12766591 12766733 -107517579 - B1_Mus1 SINE Alu -6 142 1 5 682 378 266 83 30 chr13 12766738 12766870 -107517442 - ID_B1 SINE B4 0 224 86 5 682 240 111 0 0 chr13 12767002 12767038 -107517274 + (TCC)n Simple_repeat Simple_repeat 2 37 0 5 682 3773 145 76 6 chr13 12767084 12767716 -107516596 - RLTR33 LTR ERVK -2 676 1 5 682 4601 35 23 62 chr13 12768239 12768343 -107515969 + LTRIS_Mus LTR ERV1 1 102 -485 5 682 1320 20 0 0 chr13 12768343 12768490 -107515822 + B1_Mm SINE Alu 1 147 0 5 682 4601 35 23 62 chr13 12768490 12768996 -107515316 + LTRIS_Mus LTR ERV1 103 587 0 5 682 771 201 0 7 chr13 12769141 12769276 -107515036 + B1_Mur4 SINE Alu 17 150 0 5 682 408 314 22 22 chr13 12769296 12769433 -107514879 - RMER15 LTR ERVL -47 528 392 5 682 296 333 31 31 chr13 12769535 12769665 -107514647 - Lx8 LINE L1 -310 7163 7034 5 682 251 326 59 29 chr13 12769899 12770035 -107514277 - MER63B DNA AcHobo -9 427 288 5 682 1593 32 16 0 chr13 12770417 12770602 -107513710 - B2_Mm1a SINE B2 -4 189 2 5 682 1245 41 0 26 chr13 12770617 12770768 -107513544 - B1_Mus2 SINE Alu 0 147 1 5 682 630 157 103 76 chr13 12770967 12771112 -107513200 + B1F2 SINE Alu 1 149 0 5 682 1236 35 0 7 chr13 12771129 12771272 -107513040 + B1_Mus1 SINE Alu 2 143 -5 5 682 26 0 0 0 chr13 12771277 12771303 -107513009 + AT_rich Low_complexity Low_complexity 1 26 0 5 682 270 0 0 0 chr13 12771446 12771476 -107512836 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 682 1282 41 0 0 chr13 12771753 12771900 -107512412 - B1_Mus2 SINE Alu 0 147 1 5 682 433 248 26 35 chr13 12773223 12773336 -107510976 + B1F SINE Alu 28 139 -10 5 682 405 0 0 0 chr13 12773342 12773387 -107510925 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 5 682 871 294 35 11 chr13 12773390 12773675 -107510637 + B4 SINE B4 1 292 0 5 682 23 0 0 0 chr13 12773775 12773798 -107510514 + AT_rich Low_complexity Low_complexity 1 23 0 5 682 734 75 320 27 chr13 12773961 12774111 -107510201 + B2_Mm2 SINE B2 1 194 -1 5 682 348 343 37 0 chr13 12774126 12774260 -107510052 + Tigger5 DNA MER2_type 1 139 -2267 5 682 414 302 8 45 chr13 12774296 12774428 -107509884 + Tigger5 DNA MER2_type 2280 2406 0 5 682 1098 70 14 7 chr13 12774633 12774766 -107509546 + B1_Mus2 SINE Alu 2 136 -11 5 682 251 28 0 27 chr13 12774766 12774803 -107509509 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 5 682 1282 103 16 0 chr13 12774827 12775012 -107509300 + B2_Mm1t SINE B2 1 188 -5 6 682 447 106 310 26 chr13 12776393 12776509 -107507803 - B2_Mm2 SINE B2 0 195 47 6 682 1225 130 11 0 chr13 12776575 12776752 -107507560 - B2_Mm1t SINE B2 -14 179 1 6 682 1186 133 209 4 chr13 12776761 12776995 -107507317 + RMER15 LTR ERVL 52 333 -242 6 682 2319 123 145 28 chr13 12777001 12777401 -107506911 - RLTR44B LTR ERVK 0 449 3 6 682 5162 47 0 0 chr13 12777403 12778002 -107506310 - RLTR44-int LTR ERVK 0 2812 2214 6 682 5024 61 10 10 chr13 12778263 12778889 -107505423 - RLTR44-int LTR ERVK -1324 1488 863 6 682 473 159 159 0 chr13 12778883 12778971 -107505341 - RLTR44-int LTR ERVK -2710 102 1 6 682 1937 157 91 42 chr13 12778971 12779357 -107504955 - RLTR44B LTR ERVK 0 405 1 6 682 1072 151 70 40 chr13 12779358 12779446 -107504866 + RMER15 LTR ERVL 341 427 -148 6 682 1674 151 166 6 chr13 12779446 12779772 -107504540 + ORR1C1 LTR MaLR 1 378 0 6 682 1072 151 70 40 chr13 12779772 12779911 -107504401 + RMER15 LTR ERVL 428 575 0 6 682 298 305 28 28 chr13 12780197 12780305 -107504007 + B4A SINE B4 49 156 -136 6 682 1987 278 57 27 chr13 12780409 12781151 -107503161 + L1ME1 LINE L1 5416 6179 0 6 682 229 217 16 16 chr13 12781196 12781257 -107503055 + tRNA-Ala-GCY_ tRNA tRNA 6 66 -9 6 682 297 342 8 16 chr13 12781258 12781380 -107502932 + GA-rich Low_complexity Low_complexity 2 122 0 6 682 759 109 2 1 chr13 12781705 12781830 -107502482 + B1_Mus1 SINE Alu 24 148 0 6 682 264 122 0 0 chr13 12781830 12781871 -107502441 + (A)n Simple_repeat Simple_repeat 1 41 0 6 682 223 238 286 0 chr13 12781922 12781935 -107502377 + B4A SINE B4 85 97 -195 6 682 396 0 0 0 chr13 12781935 12781979 -107502333 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 682 223 238 286 0 chr13 12781979 12782070 -107502242 + B4A SINE B4 98 218 -74 6 682 409 215 53 21 chr13 12781983 12782078 -107502234 + PB1D7 SINE Alu 21 118 -2 6 682 1087 186 19 23 chr13 12782096 12782311 -107502001 + B3 SINE B2 3 216 0 6 682 283 282 0 0 chr13 12782361 12782432 -107501880 + B4A SINE B4 1 71 -221 6 682 797 274 80 45 chr13 12782434 12782698 -107501614 + MTE2a LTR MaLR 92 364 -15 6 682 1246 34 0 0 chr13 12782708 12782855 -107501457 + B1_Mm SINE Alu 1 147 0 6 682 207 0 0 0 chr13 12782855 12782878 -107501434 + (A)n Simple_repeat Simple_repeat 1 23 0 6 682 344 281 50 84 chr13 12782952 12783131 -107501181 + MTEa LTR MaLR 206 378 -1 6 682 248 274 0 40 chr13 12783610 12783686 -107500626 - ID_B1 SINE B4 -82 142 70 6 682 246 281 57 19 chr13 12783735 12783840 -107500472 - PB1D9 SINE Alu 0 120 12 6 682 1045 51 36 0 chr13 12783848 12783986 -107500326 - B1_Mm SINE Alu 0 147 5 6 682 300 337 22 0 chr13 12784035 12784124 -107500188 + ID_B1 SINE B4 77 167 -57 6 682 433 274 0 0 chr13 12784051 12784146 -107500166 + PB1D10 SINE Alu 14 108 -9 6 682 324 120 0 62 chr13 12784159 12784239 -107500073 + GA-rich Low_complexity Low_complexity 4 78 0 6 682 541 213 19 0 chr13 12784982 12785002 -107499310 + PB1D9 SINE Alu 4 23 -97 6 682 378 0 0 0 chr13 12785002 12785044 -107499268 + (TTTTG)n Simple_repeat Simple_repeat 1 42 0 6 682 541 213 19 0 chr13 12785044 12785131 -107499181 + PB1D9 SINE Alu 24 111 -9 6 682 418 61 30 0 chr13 12785135 12785201 -107499111 + (GA)n Simple_repeat Simple_repeat 2 69 0 6 682 460 213 270 51 chr13 12785205 12785383 -107498929 + ID_B1 SINE B4 1 217 -7 6 682 326 207 17 0 chr13 12785392 12785450 -107498862 + B1_Mur4 SINE Alu 2 60 -90 6 682 234 167 0 0 chr13 12785455 12785497 -107498815 - MER63D DNA AcHobo -31 1030 989 6 682 470 258 0 0 chr13 12786529 12786622 -107497690 + B1F2 SINE Alu 5 97 -52 6 682 1659 22 0 0 chr13 12786670 12786854 -107497458 + B2_Mm1a SINE B2 2 185 -8 6 682 25 0 0 0 chr13 12786854 12786879 -107497433 + AT_rich Low_complexity Low_complexity 1 25 0 6 682 233 57 0 28 chr13 12787049 12787085 -107497227 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 6 682 784 182 121 23 chr13 12787122 12787296 -107497016 - MTD LTR MaLR -115 304 114 6 682 396 192 118 29 chr13 12787302 12787404 -107496908 + PB1D7 SINE Alu 2 112 -8 6 682 603 212 40 14 chr13 12787376 12787524 -107496788 - MTD LTR MaLR -261 158 7 6 682 32 67 0 0 chr13 12787908 12787968 -107496344 + AT_rich Low_complexity Low_complexity 1 60 0 6 682 1701 179 16 9 chr13 12789370 12789691 -107494621 - MTC LTR MaLR -98 323 1 6 682 522 250 43 0 chr13 12789745 12789861 -107494451 - B3A SINE B2 -77 121 1 6 682 232 175 0 0 chr13 12789861 12789900 -107494412 - B4 SINE B4 -65 227 189 6 682 519 220 26 6 chr13 12790193 12790308 -107494004 + B1F1 SINE Alu 9 117 -3 6 682 775 52 0 66 chr13 12790364 12790530 -107493782 + (TG)n Simple_repeat Simple_repeat 2 156 0 6 682 525 322 25 36 chr13 12790588 12790865 -107493447 - B4A SINE B4 -18 274 1 6 682 466 282 34 8 chr13 12790874 12790992 -107493320 - ID_B1 SINE B4 -7 217 97 6 682 599 230 0 0 chr13 12791141 12791254 -107493058 - ID_B1 SINE B4 -28 196 84 6 682 193 343 60 0 chr13 12791607 12791674 -107492638 + MIRb SINE MIR 36 106 -162 6 682 202 205 0 0 chr13 12792084 12792123 -107492189 + G-rich Low_complexity Low_complexity 1 39 0 6 682 594 190 17 25 chr13 12792703 12792822 -107491490 + PB1D7 SINE Alu 1 118 -2 6 682 243 186 23 0 chr13 12792832 12792875 -107491437 + ID SINE ID 27 70 -154 6 682 297 0 0 0 chr13 12792878 12792911 -107491401 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 682 220 250 0 18 chr13 12792924 12792981 -107491331 + B4A SINE B4 2 57 -235 6 682 1098 83 7 0 chr13 12793580 12793725 -107490587 + B1_Mus2 SINE Alu 2 147 0 6 682 180 0 0 0 chr13 12793725 12793745 -107490567 + (A)n Simple_repeat Simple_repeat 1 20 0 6 682 284 284 14 0 chr13 12796000 12796074 -107488238 - ID SINE ID -149 75 1 6 682 283 226 50 10 chr13 12796218 12796322 -107487990 + PB1D10 SINE Alu 5 113 -35 6 682 467 233 0 87 chr13 12796327 12796454 -107487858 + RSINE1 SINE B4 5 120 -45 6 682 244 283 42 50 chr13 12796699 12796818 -107487494 + B1F2 SINE Alu 3 120 0 6 682 483 216 239 28 chr13 12796977 12797153 -107487159 - B3 SINE B2 -1 215 3 6 682 186 103 0 0 chr13 12797177 12797206 -107487106 + (ATG)n Simple_repeat Simple_repeat 1 29 0 6 682 330 312 48 83 chr13 12797218 12797386 -107486926 - RSINE1 SINE B4 -2 163 2 6 682 237 329 77 42 chr13 12797388 12797556 -107486756 + Charlie1b DNA MER1_type 106 279 -244 6 682 1239 64 85 28 chr13 12797574 12797751 -107486561 - B2_Mm2 SINE B2 -7 188 2 6 682 894 260 4 23 chr13 12798566 12798826 -107485486 + B4A SINE B4 26 280 -12 6 682 4535 56 3 3 chr13 12799248 12799817 -107484495 - L1_Mus3 LINE L1 -3 6635 6067 6 682 225 245 235 39 chr13 12799940 12800042 -107484270 + B1F SINE Alu 7 128 -21 6 682 809 282 27 23 chr13 12800114 12800335 -107483977 - ID_B1 SINE B4 -2 222 1 6 682 812 144 30 0 chr13 12800434 12800566 -107483746 - B1_Mur2 SINE Alu 0 149 14 6 682 392 255 48 97 chr13 12800566 12800596 -107483716 - B4A SINE B4 -68 221 68 6 682 26 30 0 0 chr13 12801145 12801178 -107483134 + AT_rich Low_complexity Low_complexity 1 33 0 6 682 369 295 32 39 chr13 12801208 12801363 -107482949 - RSINE1 SINE B4 0 165 12 6 682 397 274 191 0 chr13 12801497 12801727 -107482585 - RMER15 LTR ERVL -21 554 281 6 682 321 26 0 0 chr13 12802105 12802143 -107482169 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 682 717 197 112 0 chr13 12802683 12802861 -107481451 - B4A SINE B4 -94 198 1 6 682 571 200 0 3 chr13 12803132 12803251 -107481061 + B1F SINE Alu 1 117 -3 6 682 2809 129 31 42 chr13 12803311 12803830 -107480482 + RLTR28 LTR ERVL 1 513 -11 6 682 251 0 0 56 chr13 12804320 12804356 -107479956 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 6 682 494 181 9 0 chr13 12804550 12804655 -107479657 + CT-rich Low_complexity Low_complexity 1 106 0 6 682 434 105 19 95 chr13 12805021 12805126 -107479186 + PB1D9 SINE Alu 22 118 -2 6 682 387 92 0 0 chr13 12805140 12805205 -107479107 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 6 682 235 242 97 0 chr13 12805399 12805461 -107478851 - RSINE1 SINE B4 -14 151 84 6 682 7765 66 11 33 chr13 12805539 12806552 -107477760 - L1_Mus3 LINE L1 0 6638 5783 6 682 1179 62 0 0 chr13 12806552 12806696 -107477616 - B1_Mus1 SINE Alu 0 148 5 6 682 7765 66 11 33 chr13 12806696 12806884 -107477428 - L1_Mus3 LINE L1 -856 5782 5612 6 682 329 288 35 83 chr13 12806893 12807037 -107477275 - B4A SINE B4 -151 141 5 6 682 424 260 92 23 chr13 12807076 12807100 -107477212 - B2_Mm2 SINE B2 -8 187 164 6 682 393 22 0 0 chr13 12807100 12807146 -107477166 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 682 535 251 156 2 chr13 12807146 12807294 -107477018 - B3A SINE B2 -32 163 3 6 682 665 183 21 14 chr13 12807732 12807876 -107476436 + B1_Mur3 SINE Alu 5 149 0 6 682 252 186 17 0 chr13 12807876 12807935 -107476377 + A-rich Low_complexity Low_complexity 4 63 0 6 682 325 279 0 0 chr13 12808212 12808291 -107476021 + ID4_ SINE ID 5 83 0 6 682 541 269 16 74 chr13 12808384 12808573 -107475739 - B4A SINE B4 -113 179 2 6 682 562 248 0 0 chr13 12808645 12808762 -107475550 - B1F SINE Alu 0 149 33 6 682 373 78 339 64 chr13 12808786 12808895 -107475417 - B2_Mm2 SINE B2 -9 186 48 6 682 1141 127 46 0 chr13 12808921 12809094 -107475218 - B2_Mm2 SINE B2 -14 181 1 6 682 503 248 0 9 chr13 12809166 12809276 -107475036 - ID_B1 SINE B4 -8 216 108 6 682 446 248 160 0 chr13 12809331 12809456 -107474856 + RSINE1 SINE B4 3 147 -18 6 682 310 259 36 36 chr13 12809493 12809605 -107474707 + PB1D10 SINE Alu 6 117 0 6 682 476 301 142 4 chr13 12809609 12809856 -107474456 - L1MB7 LINE L1 -67 6117 5837 6 682 1552 195 117 14 chr13 12809897 12810255 -107474057 + MTD LTR MaLR 25 419 0 6 682 422 256 16 71 chr13 12810291 12810417 -107473895 - ID_B1 SINE B4 -7 217 99 7 682 1166 208 0 0 chr13 12810880 12811087 -107473225 - B3 SINE B2 -5 211 5 7 682 421 271 8 8 chr13 12811145 12811275 -107473037 - B1F SINE Alu -18 131 2 7 682 819 101 0 0 chr13 12813368 12813487 -107470825 + (TG)n Simple_repeat Simple_repeat 1 119 0 7 682 925 225 45 5 chr13 12814664 12814865 -107469447 - ID_B1 SINE B4 -11 213 5 7 682 2611 168 84 51 chr13 12814928 12815427 -107468885 - RLTR25B LTR ERVK -394 634 117 7 682 414 0 0 0 chr13 12815427 12815473 -107468839 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 682 2611 168 84 51 chr13 12815473 12815583 -107468729 - RLTR25B LTR ERVK -912 116 6 7 682 1637 110 144 14 chr13 12816112 12816397 -107467915 - Lx LINE L1 -8 6646 6325 7 682 288 122 0 20 chr13 12817108 12817158 -107467154 + RLTR25B LTR ERVK 980 1028 0 7 682 1623 281 96 38 chr13 12817158 12817519 -107466793 - Lx9 LINE L1 -528 7116 6751 7 682 2350 95 31 11 chr13 12817519 12817869 -107466443 + L1Md_F2 LINE L1 6218 6574 -8 7 682 1623 281 96 38 chr13 12817869 12818216 -107466096 - Lx9 LINE L1 -894 6750 6368 7 682 468 35 0 0 chr13 12818239 12818297 -107466015 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 682 2026 295 40 22 chr13 12818343 12819258 -107465054 - Lx9 LINE L1 -1540 6104 5147 7 682 510 308 25 0 chr13 12819267 12819426 -107464886 - B3 SINE B2 -53 163 1 7 682 314 255 76 0 chr13 12819438 12819583 -107464729 - Lx9 LINE L1 -4407 1440 1285 7 682 2974 40 0 0 chr13 12821637 12821983 -107462329 - ORR1A1 LTR MaLR 0 346 1 7 682 10025 64 136 0 chr13 12821990 12823561 -107460751 - ORR1A1-int LTR MaLR -8 1784 1 7 682 2906 55 0 0 chr13 12823561 12823907 -107460405 - ORR1A1 LTR MaLR 0 346 1 7 682 261 57 0 0 chr13 12825231 12825266 -107459046 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 682 1170 196 9 0 chr13 12831246 12831470 -107452842 + URR1A DNA MER1_type 1 226 0 7 682 253 385 25 6 chr13 12831647 12831804 -107452508 - Lx8 LINE L1 -737 6736 6577 7 682 959 84 0 0 chr13 12833560 12833691 -107450621 + B1_Mus1 SINE Alu 5 135 -13 7 682 198 0 0 0 chr13 12833695 12833717 -107450595 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 7 682 29552 137 18 14 chr13 12835708 12841989 -107442323 - L1_Mus1 LINE L1 0 6567 261 7 682 2863 105 2 2 chr13 12842540 12842940 -107441372 - MTB LTR MaLR 0 400 1 7 682 881 263 56 20 chr13 12843449 12843755 -107440557 - Lx8 LINE L1 -1474 5999 5683 7 682 364 285 58 0 chr13 12843754 12843891 -107440421 + L1_Mur3 LINE L1 4890 5034 -846 7 682 365 222 45 45 chr13 12844429 12844561 -107439751 - Lx2B LINE L1 -1 6999 6868 7 682 652 249 35 6 chr13 12844559 12844733 -107439579 - Lx4B LINE L1 -320 6738 6560 7 683 1298 315 68 51 chr13 12845749 12846078 -107438234 + L1_Mur3 LINE L1 1047 1368 -4512 7 683 2422 128 101 7 chr13 12846078 12846486 -107437826 - RLTR44B LTR ERVK 0 449 4 7 683 1298 287 90 23 chr13 12846486 12847095 -107437217 + L1_Mur3 LINE L1 1369 2028 -3852 7 683 29308 91 25 42 chr13 12847106 12851062 -107433250 + L1Md_F2 LINE L1 570 4440 -1443 7 683 7989 44 3 0 chr13 12851062 12852042 -107432270 + L1Md_F3 LINE L1 5587 6569 -15 7 683 29308 84 14 50 chr13 12852042 12853210 -107431102 + L1Md_F2 LINE L1 4441 5586 -297 7 683 7062 85 14 5 chr13 12853210 12854194 -107430118 + L1Md_F2 LINE L1 5587 6579 -3 7 683 1572 279 28 3 chr13 12854241 12854821 -107429491 + L1_Mur3 LINE L1 2077 2697 -3449 7 683 527 107 0 12 chr13 12855771 12855856 -107428456 + (TTTC)n Simple_repeat Simple_repeat 1 84 0 7 683 1338 64 0 11 chr13 12855868 12856413 -107427899 + (TTTC)n Simple_repeat Simple_repeat 1 538 0 7 683 1137 84 6 16 chr13 12857540 12857722 -107426590 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 683 380 174 8 50 chr13 12857722 12857740 -107426572 + polypyrimidine Low_complexity Low_complexity 91 108 0 7 683 1310 61 0 11 chr13 12857740 12857922 -107426390 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 683 380 174 8 50 chr13 12857922 12857938 -107426374 + polypyrimidine Low_complexity Low_complexity 77 90 0 7 683 1118 106 0 11 chr13 12857938 12858120 -107426192 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 683 380 174 8 50 chr13 12858120 12858196 -107426116 + polypyrimidine Low_complexity Low_complexity 4 76 0 7 683 1357 81 3 6 chr13 12858198 12858546 -107425766 + (TTTC)n Simple_repeat Simple_repeat 1 347 0 7 683 1209 306 72 55 chr13 12858840 12859590 -107424722 + MTEa-int LTR MaLR 672 1572 -8 7 683 531 341 107 27 chr13 12859600 12859937 -107424375 + MTEa LTR MaLR 3 366 -13 7 683 1437 186 112 77 chr13 12860506 12860936 -107423376 - RMER1C Other Other -1 1341 897 7 683 1019 89 0 0 chr13 12861655 12861790 -107422522 + B1_Mus1 SINE Alu 2 136 -12 7 683 312 27 0 0 chr13 12861790 12861827 -107422485 + (GAA)n Simple_repeat Simple_repeat 2 38 0 7 683 6397 111 13 0 chr13 12861895 12862877 -107421435 + L1VL1 LINE L1 193 1182 -2516 7 683 198 0 0 0 chr13 12862877 12862899 -107421413 + (CAA)n Simple_repeat Simple_repeat 3 24 0 7 683 2561 97 32 0 chr13 12862899 12863107 -107421205 + L1VL1 LINE L1 1183 1402 -2296 7 683 8610 129 63 6 chr13 12863106 12865455 -107418857 - L1Md_F LINE L1 -3195 2688 204 7 683 20057 98 40 11 chr13 12865454 12866482 -107417830 - L1_Mur1 LINE L1 -1397 4489 3382 7 683 1585 42 0 0 chr13 12866482 12866673 -107417639 + B2_Mm1t SINE B2 2 192 -1 7 683 20057 112 35 11 chr13 12866673 12869666 -107414646 - L1_Mur1 LINE L1 -2505 3381 211 7 683 287 121 17 0 chr13 12869808 12869866 -107414446 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 683 482 0 17 0 chr13 12869867 12869925 -107414387 + (TA)n Simple_repeat Simple_repeat 1 59 0 7 683 21 57 0 0 chr13 12870609 12870644 -107413668 + AT_rich Low_complexity Low_complexity 1 35 0 7 683 1358 332 71 30 chr13 12870901 12871720 -107412592 - Lx8 LINE L1 -321 7152 6301 7 683 25 0 0 0 chr13 12872292 12872317 -107411995 + AT_rich Low_complexity Low_complexity 1 25 0 7 683 312 276 10 10 chr13 12872323 12872422 -107411890 + L1M2 LINE L1 3611 3709 -2434 7 683 453 317 133 5 chr13 12872457 12872660 -107411652 - MTE-int LTR MaLR -551 1029 801 7 683 2975 199 2 2 chr13 12873374 12873928 -107410384 - Lx LINE L1 -2 6652 6099 7 683 5014 159 2 12 chr13 12873953 12874818 -107409494 - L1_Mm LINE L1 0 5883 5027 7 683 727 133 35 0 chr13 12875207 12875320 -107408992 + MTC LTR MaLR 5 121 -300 7 683 298 147 14 14 chr13 12875373 12875391 -107408921 + polypyrimidine Low_complexity Low_complexity 54 71 0 7 683 531 45 0 0 chr13 12875391 12875457 -107408855 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 7 683 298 147 14 14 chr13 12875457 12875507 -107408805 + CT-rich Low_complexity Low_complexity 3 53 0 7 683 261 0 0 0 chr13 12875529 12875558 -107408754 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 7 683 289 159 0 0 chr13 12875558 12875602 -107408710 - B2_Mm2 SINE B2 -33 162 119 7 683 2557 75 3 25 chr13 12875604 12875971 -107408341 - MTA_Mm LTR MaLR -37 359 1 7 683 6910 96 58 8 chr13 12875971 12877016 -107407296 - MTA_Mm-int LTR MaLR 0 1098 1 7 683 2621 86 64 8 chr13 12877016 12877391 -107406921 - MTA_Mm LTR MaLR 0 396 1 7 683 14239 133 25 11 chr13 12877479 12880805 -107403507 + L1VL4 LINE L1 554 3899 -1984 7 683 3398 151 10 113 chr13 12880796 12881514 -107402798 - Lx LINE L1 -416 6238 5595 7 683 4753 131 39 0 chr13 12881509 12882280 -107402032 + L1VL4 LINE L1 5019 5819 -64 7 683 922 125 14 20 chr13 12882713 12882726 -107401586 - B1_Mus1 SINE Alu 0 148 137 7 683 212 0 0 35 chr13 12882726 12882755 -107401557 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 7 683 922 125 14 20 chr13 12882755 12882888 -107401424 - B1_Mus1 SINE Alu -12 136 3 7 683 219 133 0 0 chr13 12884113 12884158 -107400154 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 7 683 21 0 0 0 chr13 12885782 12885803 -107398509 + AT_rich Low_complexity Low_complexity 1 21 0 7 683 705 211 14 0 chr13 12885922 12886064 -107398248 - B1_Mus1 SINE Alu -1 147 4 7 683 483 60 0 0 chr13 12886099 12886166 -107398146 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 683 4589 262 47 35 chr13 12887178 12888548 -107395764 + Lx6 LINE L1 6021 7407 -53 7 683 305 228 14 14 chr13 12888549 12888687 -107395625 + (TA)n Simple_repeat Simple_repeat 2 139 0 7 683 396 59 29 14 chr13 12888722 12888791 -107395521 + (TAGA)n Simple_repeat Simple_repeat 3 72 0 7 683 206 118 0 0 chr13 12889395 12889429 -107394883 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 7 683 222 319 16 96 chr13 12889771 12889896 -107394416 - B2_Mm2 SINE B2 -49 146 32 7 683 390 313 63 60 chr13 12890577 12890876 -107393436 - Lx8 LINE L1 -72 7401 7102 7 683 5659 119 25 5 chr13 12890993 12891888 -107392424 + Lx3_Mus LINE L1 6096 7008 -1 7 683 243 196 20 0 chr13 12893805 12893856 -107390456 + MTEb LTR MaLR 6 57 -322 7 683 940 356 62 6 chr13 12894399 12894902 -107389410 + MTEa-int LTR MaLR 826 1356 -14 7 683 396 381 110 27 chr13 12894961 12895260 -107389052 + MTEa LTR MaLR 1 324 -55 7 683 1350 137 60 35 chr13 12895491 12895777 -107388535 - Lx LINE L1 0 6654 6398 7 683 343 39 19 0 chr13 12895777 12895829 -107388483 + L1_Mus2 LINE L1 6512 6564 -2 7 683 5482 216 31 81 chr13 12895890 12896906 -107387406 + Lx6 LINE L1 2199 3183 -2694 7 683 2439 113 110 5 chr13 12896906 12897297 -107387015 + Lx3A LINE L1 6540 6971 -10 7 683 5482 216 31 81 chr13 12897297 12897968 -107386344 + Lx6 LINE L1 3184 3802 -2075 7 683 2387 211 54 52 chr13 12897968 12898598 -107385714 + Lx6 LINE L1 5203 5833 -44 7 683 368 267 19 29 chr13 12898618 12898722 -107385590 + Lx6 LINE L1 5891 5993 -1467 7 683 242 247 35 0 chr13 12899121 12899206 -107385106 + Lx6 LINE L1 5988 6075 -1385 7 683 2095 150 24 34 chr13 12899230 12899610 -107384702 - RLTR25A LTR ERVK -219 884 509 7 683 283 46 92 0 chr13 12899623 12899688 -107384624 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 7 683 2310 194 64 34 chr13 12899706 12900203 -107384109 - RLTR25A LTR ERVK -583 520 9 7 683 605 285 35 30 chr13 12900215 12900414 -107383898 + Lx6 LINE L1 6073 6272 -1188 7 683 2584 46 9 0 chr13 12900422 12900749 -107383563 + L1Md_F2 LINE L1 6251 6580 -2 7 683 519 291 84 7 chr13 12900774 12900916 -107383396 + Lx5 LINE L1 6478 6630 -420 7 683 1957 138 45 102 chr13 12900923 12901365 -107382947 - RLTR23 LTR ERV1 -3 427 11 7 683 1285 310 39 15 chr13 12901380 12901789 -107382523 + Lx6 LINE L1 7019 7437 -23 7 683 534 200 14 65 chr13 12901829 12901968 -107382344 + L1_Mur3 LINE L1 2894 3025 -2855 7 683 7445 168 20 21 chr13 12901966 12903494 -107380818 - L1_Mur2 LINE L1 -1287 4590 3065 7 683 391 188 0 0 chr13 12905259 12905323 -107378989 + 5S rRNA rRNA 27 90 -31 7 683 407 305 68 27 chr13 12905892 12906126 -107378186 - MTEa LTR MaLR -13 366 117 7 683 1363 244 141 80 chr13 12906130 12906633 -107377679 - RMER19C LTR ERVK 0 611 78 7 683 889 259 27 25 chr13 12906684 12906999 -107377313 + Lx8 LINE L1 5501 5790 -57 7 683 1407 334 62 44 chr13 12907263 12908134 -107376178 + Lx8 LINE L1 6127 7013 -460 7 683 3250 78 5 2 chr13 12909405 12909843 -107374469 + L1_Mus1 LINE L1 6129 6567 0 7 683 212 0 36 0 chr13 12910059 12910087 -107374225 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 683 260 366 43 60 chr13 12910581 12910950 -107373362 + RMER15-int LTR ERVL 4603 4965 -34 7 683 11530 69 21 2 chr13 12911347 12913023 -107371289 - L1Md_F2 LINE L1 -574 6008 4311 7 683 693 122 60 22 chr13 12913710 12913844 -107370468 - RMER19C LTR ERVK -472 139 1 7 683 252 246 0 0 chr13 12913854 12913919 -107370393 - L1_Mur3 LINE L1 -1789 4091 4027 7 683 614 265 80 15 chr13 12914416 12914615 -107369697 - B3 SINE B2 -3 213 2 8 683 1894 204 29 3 chr13 12914739 12915117 -107369195 + ORR1B1 LTR MaLR 1 388 -6 8 683 273 317 120 49 chr13 12915193 12915518 -107368794 - L1M2 LINE L1 -2011 4132 3785 8 683 1988 247 40 45 chr13 12915722 12916349 -107367963 - Lx7 LINE L1 0 7696 7073 8 683 413 300 22 107 chr13 12916442 12916714 -107367598 - Lx9 LINE L1 -431 7213 6965 8 683 4692 156 76 33 chr13 12916777 12917680 -107366632 + L1VL2 LINE L1 65 1006 -5329 8 683 2357 104 10 3 chr13 12917676 12918062 -107366250 + MusHAL1 LINE L1 226 614 -2098 8 683 2581 54 42 3 chr13 12918062 12918394 -107365918 + IAPLTR4 LTR ERVK 1 345 0 8 683 487 217 17 34 chr13 12918394 12918513 -107365799 + IAPLTR3-int LTR ERVK 1 117 -6704 8 683 303 190 0 148 chr13 12918513 12918655 -107365657 + IAPLTR3-int LTR ERVK 834 954 -5867 8 683 374 136 7 145 chr13 12918624 12918762 -107365550 + MMERVK10C-int LTR ERVK 834 952 -6629 8 683 1335 220 102 56 chr13 12918882 12919362 -107364950 + RMER16-int LTR ERVK 255 668 -5469 8 683 469 230 88 0 chr13 12919365 12919478 -107364834 + RMER16-int LTR ERVK 938 1060 -5077 8 683 279 279 0 55 chr13 12919491 12919582 -107364730 + ETnERV3-int LTR ERVK 2454 2539 -4867 8 683 6770 115 53 4 chr13 12919594 12920976 -107363336 + ETnERV3-int LTR ERVK 2735 4271 -3135 8 683 450 196 12 35 chr13 12920981 12921103 -107363209 + MMETn-int LTR ERVK 2357 2462 -2382 8 683 774 83 0 9 chr13 12921118 12921227 -107363085 + IAPLTR3-int LTR ERVK 4530 4637 -2944 8 683 6166 243 49 39 chr13 12921386 12923895 -107360417 + IAPLTR3-int LTR ERVK 5068 7329 -351 8 683 2472 52 36 3 chr13 12923895 12924224 -107360088 + IAPLTR4 LTR ERVK 1 340 -5 8 683 24024 128 19 2 chr13 12924227 12928897 -107355415 + L1_Mus1 LINE L1 1811 6565 -2 8 683 355 357 51 35 chr13 12928910 12929221 -107355091 + L1M2 LINE L1 3636 3951 -2192 8 683 368 171 12 0 chr13 12929378 12929460 -107354852 + (TA)n Simple_repeat Simple_repeat 2 84 0 8 683 2462 96 87 8 chr13 12929461 12929828 -107354484 - MTA_Mm LTR MaLR 0 396 1 8 683 22613 166 25 16 chr13 12929934 12936146 -107348166 + Lx LINE L1 386 6650 -4 8 683 263 281 0 0 chr13 12936560 12936624 -107347688 + CT-rich Low_complexity Low_complexity 3 66 0 8 683 59 81 0 0 chr13 12936901 12937037 -107347275 + AT_rich Low_complexity Low_complexity 1 136 0 8 683 8623 127 30 7 chr13 12937057 12938099 -107346213 - Lx3_Mus LINE L1 -14 6995 5923 8 683 585 0 0 0 chr13 12938099 12938164 -107346148 + (TC)n Simple_repeat Simple_repeat 2 66 0 8 683 12515 104 16 3 chr13 12938164 12940099 -107344213 - Lx3_Mus LINE L1 -1087 5922 3969 8 683 615 164 0 0 chr13 12940277 12940381 -107343931 - Lx2A1 LINE L1 -546 6462 6359 8 683 3248 150 43 0 chr13 12940382 12940935 -107343377 + Lx2A1 LINE L1 6430 7006 -2 8 683 855 109 23 0 chr13 12941096 12941224 -107343088 - L1_Mm LINE L1 -1314 4569 4439 8 683 528 284 130 41 chr13 12941226 12941564 -107342748 + RLTR9A LTR ERVK 1 368 0 8 683 258 32 0 0 chr13 12941991 12942022 -107342290 + (GA)n Simple_repeat Simple_repeat 1 31 0 8 683 5154 189 87 45 chr13 12942024 12943578 -107340734 + RMER16-int LTR ERVK 442 3535 -3709 8 683 15654 132 34 24 chr13 12943894 12946641 -107337671 + RMER16-int LTR ERVK 1566 4338 -1068 8 683 647 319 14 7 chr13 12946636 12946911 -107337401 + RLTR6-int LTR ERV1 7387 7663 -115 8 683 265 244 86 93 chr13 12947028 12947168 -107337144 + RMER16-int LTR ERVK 5241 5379 -27 8 683 541 280 179 25 chr13 12947263 12947582 -107336730 + RLTR9A LTR ERVK 1 368 0 8 683 11287 191 21 12 chr13 12947582 12949976 -107334336 - L1_Mur1 LINE L1 -1441 4445 2029 8 683 6526 176 3 24 chr13 12949991 12951824 -107332488 + Lx LINE L1 4569 6379 -275 8 683 3320 51 13 128 chr13 12951824 12952361 -107331951 + IAPLTR2_Mm LTR ERVK 1 475 0 8 683 1059 99 25 81 chr13 12952362 12952560 -107331752 + IAPEz-int LTR ERVK 9 195 -6286 8 683 244 302 0 0 chr13 12952560 12952613 -107331699 + RLTR27 LTR ERVK 223 275 -34 8 683 907 60 8 0 chr13 12952613 12952730 -107331582 + IAPEz-int LTR ERVK 168 285 -6196 8 683 7313 68 57 45 chr13 12952730 12953787 -107330525 + IAPEz-int LTR ERVK 211 1279 -5202 8 683 13274 49 10 8 chr13 12953807 12955463 -107328849 + IAPEz-int LTR ERVK 4823 6481 0 8 683 3595 40 50 11 chr13 12955463 12955920 -107328392 + IAPLTR2_Mm LTR ERVK 1 475 0 8 683 1339 186 45 4 chr13 12955920 12956184 -107328128 + Lx LINE L1 6374 6648 -6 8 683 729 249 35 9 chr13 12956184 12956377 -107327935 - Lx6 LINE L1 -333 7127 6950 8 683 333 158 0 0 chr13 12957215 12957297 -107327015 + CT-rich Low_complexity Low_complexity 1 82 0 8 683 21 0 0 0 chr13 12960710 12960731 -107323581 + AT_rich Low_complexity Low_complexity 1 21 0 8 683 39 0 0 0 chr13 12961206 12961245 -107323067 + AT_rich Low_complexity Low_complexity 1 39 0 8 683 225 310 40 89 chr13 12961494 12961618 -107322694 + MTE-int LTR MaLR 906 1023 -557 8 683 27 0 0 0 chr13 12961890 12961917 -107322395 + AT_rich Low_complexity Low_complexity 1 27 0 8 683 26 109 0 0 chr13 12962108 12962218 -107322094 + AT_rich Low_complexity Low_complexity 1 110 0 8 683 28 29 0 0 chr13 12962246 12962281 -107322031 + AT_rich Low_complexity Low_complexity 1 35 0 8 683 785 223 0 0 chr13 12962390 12962538 -107321774 + B1_Mur4 SINE Alu 1 148 -2 8 683 215 179 36 0 chr13 12963006 12963062 -107321250 + T-rich Low_complexity Low_complexity 3 60 0 8 683 248 229 141 61 chr13 12964726 12964889 -107319423 - MIRc SINE MIR -1 267 92 8 683 300 263 121 28 chr13 12965956 12966097 -107318215 - RMER15 LTR ERVL -94 481 328 8 683 276 346 29 7 chr13 12966709 12966846 -107317466 - Lx8 LINE L1 -757 6716 6577 8 683 604 311 14 56 chr13 12967881 12968088 -107316224 - B3A SINE B2 0 216 7 8 683 222 143 24 0 chr13 12968096 12968138 -107316174 + T-rich Low_complexity Low_complexity 2 44 0 8 683 2629 296 83 36 chr13 12968165 12969928 -107314384 - Lx9 LINE L1 -7 7637 5653 8 683 242 306 40 34 chr13 12970576 12970725 -107313587 - L1_Mur3 LINE L1 -388 5492 5343 8 683 655 284 102 71 chr13 12970706 12971859 -107312453 - L1M2 LINE L1 -751 5392 4204 8 683 3257 40 0 0 chr13 12975071 12975466 -107308846 + L1Md_F2 LINE L1 6188 6582 0 8 684 21 36 0 0 chr13 12976913 12976941 -107307371 + AT_rich Low_complexity Low_complexity 1 28 0 8 684 519 45 0 0 chr13 12976949 12977015 -107307297 + (TA)n Simple_repeat Simple_repeat 1 66 0 8 684 1529 228 58 42 chr13 12977943 12978012 -107306300 - ORR1B2 LTR MaLR 0 367 311 8 684 4962 53 5 0 chr13 12978012 12978629 -107305683 - L1Md_F2 LINE L1 -2 6580 5961 8 684 1529 228 58 42 chr13 12978629 12978920 -107305392 - ORR1B2 LTR MaLR -57 310 1 8 684 1082 69 7 0 chr13 12979405 12979550 -107304762 + B1_Mm SINE Alu 1 146 -1 8 684 285 53 17 35 chr13 12979551 12979609 -107304703 + (CAAAAA)n Simple_repeat Simple_repeat 4 60 0 8 684 723 286 166 60 chr13 12980939 12981309 -107303003 - MTD-int LTR MaLR -635 623 289 8 684 1492 273 22 5 chr13 12981309 12981721 -107302591 + MTD LTR MaLR 1 419 0 8 684 723 300 93 98 chr13 12981721 12981915 -107302397 - MTD-int LTR MaLR -970 288 85 8 684 2791 67 0 3 chr13 12981915 12982273 -107302039 + IAPEY2_LTR LTR ERVK 1 357 0 8 684 723 300 93 98 chr13 12982273 12982338 -107301974 - MTD-int LTR MaLR -1174 84 25 8 684 1206 267 93 8 chr13 12982362 12982747 -107301565 - MTD LTR MaLR -1 418 1 8 684 22 35 0 0 chr13 12983658 12983687 -107300625 + AT_rich Low_complexity Low_complexity 1 29 0 8 684 1449 218 57 28 chr13 12985446 12985800 -107298512 - ORR1D1 LTR MaLR -10 364 1 8 684 773 317 77 29 chr13 12986191 12986805 -107297507 + Lx8 LINE L1 2441 3083 -2797 8 684 7451 108 2 7 chr13 12986832 12987999 -107296313 - L1_Mus3 LINE L1 -6 6632 5470 8 684 514 316 85 0 chr13 12988011 12988188 -107296124 + B3 SINE B2 25 216 0 8 684 1903 134 39 27 chr13 12988289 12988619 -107295693 + Lx LINE L1 6320 6653 -1 8 684 439 280 41 6 chr13 12988677 12988846 -107295466 + Lx8 LINE L1 3169 3343 -2537 8 684 1378 303 15 15 chr13 12988847 12989259 -107295053 + Lx6 LINE L1 7009 7420 -40 8 684 3702 292 96 49 chr13 12989273 12991676 -107292636 + Lx8 LINE L1 3336 5872 -1601 8 684 795 36 27 0 chr13 12991676 12991787 -107292525 + (GA)n Simple_repeat Simple_repeat 2 115 0 8 684 1423 328 75 47 chr13 12991787 12992476 -107291836 + Lx8 LINE L1 5873 6564 -909 8 684 246 128 0 0 chr13 12992476 12992515 -107291797 + (TA)n Simple_repeat Simple_repeat 1 39 0 8 684 2399 101 47 8 chr13 12992517 12992899 -107291413 + MTB LTR MaLR 7 371 -29 8 684 549 356 46 40 chr13 12992900 12993271 -107291041 + Lx8 LINE L1 7008 7401 -72 8 684 31 58 0 0 chr13 12993282 12993334 -107290978 + AT_rich Low_complexity Low_complexity 1 52 0 8 684 227 333 98 12 chr13 12993884 12994048 -107290264 - RMER15 LTR ERVL -42 533 356 8 684 290 45 23 0 chr13 12994893 12994937 -107289375 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 8 684 3635 140 26 15 chr13 12995165 12995776 -107288536 - Lx LINE L1 0 6654 6037 8 684 498 343 45 0 chr13 12995836 12996081 -107288231 + MTE-int LTR MaLR 1323 1578 -2 8 684 2014 334 76 7 chr13 12996728 12997638 -107286674 - Lx8 LINE L1 -121 7352 6380 8 684 1221 263 103 16 chr13 12997666 12998033 -107286279 - MTC LTR MaLR -10 411 13 8 684 371 355 17 57 chr13 12998080 12998376 -107285936 - Lx8 LINE L1 -1107 6366 6083 8 684 539 294 26 34 chr13 12998478 12998717 -107285595 - Lx8 LINE L1 -1946 5750 5505 8 684 264 245 57 29 chr13 12998857 12998962 -107285350 + ORR1D2 LTR MaLR 242 349 -21 8 684 263 244 11 43 chr13 12999567 12999661 -107284651 - ORR1A3-int LTR MaLR -1306 657 567 8 684 956 149 22 6 chr13 12999668 12999850 -107284462 - MERVL_2A-int LTR ERVL -139 5622 5438 8 684 359 133 82 20 chr13 12999853 12999999 -107284313 + (TA)n Simple_repeat Simple_repeat 2 156 0 8 684 2727 236 47 21 chr13 13000007 13000709 -107283603 - MERVL_2A-int LTR ERVL -318 5443 4724 1 684 3486 162 40 47 chr13 13000709 13001428 -107282884 - Lx2 LINE L1 0 6997 6284 2 684 8107 195 76 114 chr13 13001428 13001579 -107282733 - L1VL4 LINE L1 -1879 4007 3845 3 684 225 0 0 0 chr13 13001579 13001604 -107282708 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 684 8107 182 70 106 chr13 13001604 13004793 -107279519 - L1VL4 LINE L1 -2042 3844 795 3 684 379 235 78 10 chr13 13004800 13004903 -107279409 - L1VL4 LINE L1 -5801 856 747 3 684 1105 251 11 0 chr13 13004904 13005171 -107279141 - MERVL_2A-int LTR ERVL -1050 4711 4442 1 684 283 291 110 34 chr13 13005198 13005344 -107278968 - MERVL_2A-int LTR ERVL -1387 4374 4218 1 684 5412 233 67 28 chr13 13005324 13005394 -107278918 - MERVL_2A-int LTR ERVL -4089 1672 1609 1 684 2865 76 15 10 chr13 13005394 13005795 -107278517 - RLTR9D LTR ERVK 0 403 1 5 684 5412 233 67 28 chr13 13005795 13006575 -107277737 - MERVL_2A-int LTR ERVL -4153 1608 783 1 684 264 59 0 0 chr13 13006575 13006609 -107277703 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 684 5412 233 67 28 chr13 13006609 13007367 -107276945 - MERVL_2A-int LTR ERVL -4979 782 1 1 684 916 267 126 81 chr13 13007367 13007876 -107276436 - MT2A LTR ERVL 0 533 2 1 684 4966 118 9 29 chr13 13008549 13009418 -107274894 - L1_Mm LINE L1 -1489 4394 3543 7 684 2399 84 7 41 chr13 13009415 13009860 -107274452 + L1_Mus3 LINE L1 5682 6124 -873 8 684 340 158 53 0 chr13 13009862 13009957 -107274355 + GA-rich Low_complexity Low_complexity 2 101 0 9 684 6652 57 6 0 chr13 13010361 13011243 -107273069 - L1Md_F3 LINE L1 0 6584 5698 1 684 790 85 13 24 chr13 13011244 13011392 -107272920 + L1Md_F3 LINE L1 5602 5747 -1303 1 684 2931 96 186 2 chr13 13011604 13012104 -107272208 + L1_Mus3 LINE L1 6027 6618 -20 1 684 269 229 49 0 chr13 13012213 13012274 -107272038 - Lx6 LINE L1 -358 7102 7039 1 684 1024 284 146 19 chr13 13012334 13012744 -107271568 - Lx6 LINE L1 -504 6956 6495 1 684 2539 222 2 41 chr13 13012902 13013493 -107270819 + Lx2B LINE L1 6411 6978 -22 1 684 183 80 0 0 chr13 13013494 13013519 -107270793 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 684 797 262 65 9 chr13 13013524 13013755 -107270557 + Lx6 LINE L1 7211 7454 -6 1 684 486 0 0 0 chr13 13013874 13013928 -107270384 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 684 246 267 0 6 chr13 13014405 13014486 -107269826 + T-rich Low_complexity Low_complexity 1 80 0 1 684 1172 62 0 0 chr13 13014486 13014632 -107269680 - B1_Mus2 SINE Alu 0 147 2 1 684 203 305 0 10 chr13 13014632 13014646 -107269666 + T-rich Low_complexity Low_complexity 1 14 0 1 684 1508 278 8 45 chr13 13014799 13015067 -107269245 + Lx7 LINE L1 5497 5764 -1932 2 684 239 72 0 23 chr13 13015067 13015110 -107269202 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 2 684 1098 86 0 0 chr13 13015111 13015251 -107269061 - B1_Mus2 SINE Alu -6 141 2 2 684 1508 296 139 38 chr13 13015251 13016110 -107268202 + Lx7 LINE L1 5765 6734 -962 2 684 2386 176 42 32 chr13 13016103 13016626 -107267686 - Lx3C LINE L1 -477 6499 5972 2 684 2870 189 76 56 chr13 13016626 13017175 -107267137 - RLTR25B LTR ERVK -350 678 142 2 684 297 0 0 0 chr13 13017175 13017208 -107267104 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 684 2870 189 76 56 chr13 13017208 13017319 -107266993 - RLTR25B LTR ERVK -887 141 7 2 684 574 135 54 9 chr13 13017848 13017960 -107266352 - Lx LINE L1 -8 6646 6530 2 684 2060 112 19 3 chr13 13017960 13018275 -107266037 + RLTR46 LTR ERVK 1 320 0 2 684 20010 233 20 19 chr13 13018277 13023320 -107260992 + IAPEY3-int LTR ERVK 3 5052 -2628 2 684 2226 262 21 26 chr13 13023325 13024249 -107260063 + IAPEY3-int LTR ERVK 5967 7330 -350 2 684 1976 118 22 3 chr13 13024249 13024563 -107259749 + RLTR46 LTR ERVK 1 320 0 2 684 852 118 167 23 chr13 13024563 13024737 -107259575 - Lx LINE L1 -127 6527 6329 2 684 267 149 0 21 chr13 13025451 13025499 -107258813 + RLTR25B LTR ERVK 980 1026 -2 2 684 864 286 29 53 chr13 13025500 13025876 -107258436 - Lx9 LINE L1 -527 7117 6751 3 684 1845 98 14 10 chr13 13025862 13026152 -107258160 + L1_Mus1 LINE L1 6211 6501 -66 3 684 690 328 40 12 chr13 13026158 13026479 -107257833 - Lx9 LINE L1 -948 6696 6367 3 684 480 18 0 0 chr13 13026502 13026559 -107257753 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 684 1732 299 37 10 chr13 13026761 13027528 -107256784 - Lx9 LINE L1 -1673 5971 5147 3 684 556 299 14 0 chr13 13027549 13027696 -107256616 - B3 SINE B2 -67 149 1 3 684 286 246 64 0 chr13 13027740 13027850 -107256462 - Lx9 LINE L1 -4446 1401 1285 3 684 2869 49 0 0 chr13 13029863 13030209 -107254103 - ORR1A1 LTR MaLR 0 346 1 3 684 8648 88 9 5 chr13 13030216 13031788 -107252524 - ORR1A1-int LTR MaLR -8 1784 1 3 684 2658 84 0 0 chr13 13031788 13032134 -107252178 - ORR1A1 LTR MaLR 0 346 1 3 684 378 91 0 0 chr13 13033461 13033516 -107250796 + (TG)n Simple_repeat Simple_repeat 1 55 0 3 684 1147 192 9 0 chr13 13038265 13038489 -107245823 + URR1A DNA MER1_type 1 226 0 3 684 271 372 25 13 chr13 13038565 13038802 -107245510 - RMER15-int LTR ERVL -231 4768 4529 3 684 971 84 0 0 chr13 13040579 13040710 -107243602 + B1_Mus1 SINE Alu 5 135 -13 3 684 198 0 0 0 chr13 13040714 13040736 -107243576 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 684 28083 137 17 14 chr13 13042727 13049009 -107235303 - L1_Mus1 LINE L1 0 6567 261 4 684 2858 108 2 2 chr13 13049560 13049960 -107234352 - MTB LTR MaLR 0 400 1 4 684 782 267 56 20 chr13 13050467 13050773 -107233539 - Lx8 LINE L1 -1474 5999 5683 4 684 364 270 58 0 chr13 13050772 13050909 -107233403 + L1_Mur3 LINE L1 4890 5034 -846 4 684 329 222 45 45 chr13 13051447 13051579 -107232733 - Lx2B LINE L1 -1 6999 6868 4 684 596 249 35 6 chr13 13051577 13051751 -107232561 - Lx4B LINE L1 -320 6738 6560 4 684 1115 287 90 23 chr13 13052972 13053096 -107231216 + L1_Mur3 LINE L1 1246 1368 -4512 4 684 2449 131 101 7 chr13 13053096 13053504 -107230808 - RLTR44B LTR ERVK 0 449 4 4 684 1115 287 90 23 chr13 13053504 13054113 -107230199 + L1_Mur3 LINE L1 1369 2028 -3852 4 684 24839 92 12 43 chr13 13054124 13058075 -107226237 + L1Md_F2 LINE L1 570 4444 -1439 4 684 8086 42 3 0 chr13 13058075 13059058 -107225254 + L1Md_F3 LINE L1 5587 6572 -12 4 684 24839 88 3 56 chr13 13059058 13060221 -107224091 + L1Md_F2 LINE L1 4445 5586 -297 4 684 7049 87 14 5 chr13 13060221 13061205 -107223107 + L1Md_F2 LINE L1 5587 6579 -3 4 684 1512 284 28 3 chr13 13061252 13061832 -107222480 + L1_Mur3 LINE L1 2077 2697 -3449 4 684 1162 73 0 17 chr13 13062788 13062969 -107221343 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 5 684 544 164 8 15 chr13 13062969 13063054 -107221258 + polypyrimidine Low_complexity Low_complexity 44 126 0 5 684 1259 73 0 11 chr13 13063054 13063235 -107221077 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 5 684 544 164 8 15 chr13 13063235 13063272 -107221040 + polypyrimidine Low_complexity Low_complexity 6 43 0 5 684 1190 101 9 11 chr13 13063275 13063807 -107220505 + (TTTC)n Simple_repeat Simple_repeat 1 530 0 5 684 1196 309 72 55 chr13 13064117 13064867 -107219445 + MTEa-int LTR MaLR 672 1572 -8 5 684 542 338 107 27 chr13 13064877 13065214 -107219098 + MTEa LTR MaLR 3 366 -13 5 684 1416 189 112 77 chr13 13065784 13066214 -107218098 - RMER1C Other Other -1 1341 897 5 684 1019 89 0 0 chr13 13066933 13067068 -107217244 + B1_Mus1 SINE Alu 2 136 -12 5 684 240 35 0 0 chr13 13067068 13067097 -107217215 + (GAA)n Simple_repeat Simple_repeat 2 30 0 5 684 6335 112 13 2 chr13 13067168 13068152 -107216160 + L1VL1 LINE L1 193 1182 -2516 5 684 360 0 0 0 chr13 13068152 13068192 -107216120 + (CAA)n Simple_repeat Simple_repeat 3 42 0 6 684 2587 94 32 0 chr13 13068192 13068400 -107215912 + L1VL1 LINE L1 1183 1403 -2295 5 684 8128 134 65 9 chr13 13068399 13070748 -107213564 - L1Md_F LINE L1 -1228 2589 107 6 684 20070 98 40 11 chr13 13070747 13071775 -107212537 - L1_Mur1 LINE L1 -1397 4489 3382 6 684 1585 42 0 0 chr13 13071775 13071966 -107212346 + B2_Mm1t SINE B2 2 192 -1 6 684 20070 113 35 11 chr13 13071966 13074959 -107209353 - L1_Mur1 LINE L1 -2505 3381 211 6 684 287 121 17 0 chr13 13075101 13075159 -107209153 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 684 554 0 15 0 chr13 13075160 13075226 -107209086 + (TA)n Simple_repeat Simple_repeat 1 67 0 6 684 21 57 0 0 chr13 13075910 13075945 -107208367 + AT_rich Low_complexity Low_complexity 1 35 0 6 684 1358 332 71 30 chr13 13076202 13077021 -107207291 - Lx8 LINE L1 -321 7152 6301 6 684 25 0 0 0 chr13 13077593 13077618 -107206694 + AT_rich Low_complexity Low_complexity 1 25 0 6 684 312 276 10 10 chr13 13077624 13077723 -107206589 + L1M2 LINE L1 3611 3709 -2434 6 684 453 317 133 5 chr13 13077758 13077961 -107206351 - MTE-int LTR MaLR -551 1029 801 7 684 2975 199 2 2 chr13 13078675 13079229 -107205083 - Lx LINE L1 -2 6652 6099 7 684 4988 161 2 12 chr13 13079254 13080119 -107204193 - L1_Mm LINE L1 0 5883 5027 7 684 727 133 35 0 chr13 13080508 13080621 -107203691 + MTC LTR MaLR 5 121 -300 7 684 298 153 14 27 chr13 13080674 13080692 -107203620 + polypyrimidine Low_complexity Low_complexity 58 75 0 7 684 492 18 0 0 chr13 13080692 13080749 -107203563 + (TTCC)n Simple_repeat Simple_repeat 1 57 0 7 684 298 153 14 27 chr13 13080749 13080804 -107203508 + CT-rich Low_complexity Low_complexity 3 57 0 7 684 261 0 0 0 chr13 13080826 13080855 -107203457 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 7 684 289 159 0 0 chr13 13080855 13080899 -107203413 - B2_Mm2 SINE B2 -33 162 119 7 684 2557 75 3 25 chr13 13080901 13081268 -107203044 - MTA_Mm LTR MaLR -37 359 1 7 684 6910 96 58 8 chr13 13081268 13082313 -107201999 - MTA_Mm-int LTR MaLR 0 1098 1 7 684 2621 86 64 8 chr13 13082313 13082688 -107201624 - MTA_Mm LTR MaLR 0 396 1 7 684 14467 209 114 18 chr13 13082776 13087592 -107196720 + L1VL4 LINE L1 554 5829 -57 8 684 922 125 14 20 chr13 13088018 13088031 -107196281 - B1_Mus1 SINE Alu 0 148 137 8 684 212 0 0 35 chr13 13088031 13088060 -107196252 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 8 684 922 125 14 20 chr13 13088060 13088193 -107196119 - B1_Mus1 SINE Alu -12 136 3 8 684 219 133 0 0 chr13 13089406 13089451 -107194861 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 8 684 249 265 50 110 chr13 13091079 13091215 -107193097 - Lx9 LINE L1 -3 7641 7506 8 684 698 213 14 0 chr13 13091215 13091356 -107192956 - B1_Mus1 SINE Alu -2 146 4 8 684 249 265 50 110 chr13 13091356 13091391 -107192921 - Lx9 LINE L1 -139 7505 7477 8 684 519 56 0 0 chr13 13091391 13091462 -107192850 + (CA)n Simple_repeat Simple_repeat 2 72 0 8 684 249 265 50 110 chr13 13091462 13091590 -107192722 - Lx9 LINE L1 -168 7476 7359 8 684 4635 261 48 34 chr13 13092474 13093841 -107190471 + Lx6 LINE L1 6021 7407 -53 8 684 302 232 14 14 chr13 13093842 13093982 -107190330 + (TA)n Simple_repeat Simple_repeat 2 141 0 8 684 468 53 26 13 chr13 13094017 13094094 -107190218 + (TAGA)n Simple_repeat Simple_repeat 3 80 0 8 684 206 118 0 0 chr13 13094700 13094734 -107189578 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 9 684 211 319 16 96 chr13 13095076 13095201 -107189111 - B2_Mm2 SINE B2 -49 146 32 9 684 331 295 140 39 chr13 13095874 13096181 -107188131 - Lx8 LINE L1 -34 7439 7102 9 684 5694 123 22 6 chr13 13096293 13097202 -107187110 + Lx3_Mus LINE L1 6085 7008 -1 9 684 243 196 20 0 chr13 13099119 13099170 -107185142 + MTEb LTR MaLR 6 57 -322 9 684 911 365 16 11 chr13 13099713 13100076 -107184236 + MTEa-int LTR MaLR 826 1190 -390 9 684 244 315 118 0 chr13 13100089 13100216 -107184096 + MTEa-int LTR MaLR 1215 1356 -14 9 684 397 370 117 33 chr13 13100275 13100574 -107183738 + MTEa LTR MaLR 1 324 -55 9 684 1354 151 125 29 chr13 13100815 13101095 -107183217 - Lx2 LINE L1 0 6997 6691 9 684 329 58 19 0 chr13 13101095 13101147 -107183165 + L1_Mus2 LINE L1 6512 6564 -2 9 684 5576 215 32 76 chr13 13101208 13102218 -107182094 + Lx6 LINE L1 2199 3183 -2694 9 684 2489 108 110 5 chr13 13102218 13102609 -107181703 + Lx3A LINE L1 6540 6971 -10 9 684 5576 215 32 76 chr13 13102609 13103276 -107181036 + Lx6 LINE L1 3184 3802 -2075 9 684 2368 210 56 52 chr13 13103276 13103905 -107180407 + Lx6 LINE L1 5203 5833 -44 9 684 368 267 19 29 chr13 13103925 13104029 -107180283 + Lx6 LINE L1 5891 5993 -1467 9 684 266 235 35 0 chr13 13104425 13104510 -107179802 + Lx6 LINE L1 5988 6075 -1385 9 684 2037 155 24 34 chr13 13104534 13104914 -107179398 - RLTR25A LTR ERVK -219 884 509 1 684 462 86 10 31 chr13 13104918 13105014 -107179298 + (CAAAA)n Simple_repeat Simple_repeat 4 97 0 1 684 2350 193 60 36 chr13 13105014 13105518 -107178794 - RLTR25A LTR ERVK -583 520 5 1 684 520 293 41 30 chr13 13105526 13105732 -107178580 + Lx6 LINE L1 6073 6331 -727 9 684 2497 46 19 0 chr13 13105732 13106056 -107178256 + L1Md_F2 LINE L1 6251 6580 -2 1 684 409 326 62 26 chr13 13106056 13106081 -107178231 + Lx6 LINE L1 6332 6365 -693 9 684 558 269 84 7 chr13 13106081 13106223 -107178089 + Lx5 LINE L1 6478 6630 -420 1 684 1961 145 40 107 chr13 13106230 13106677 -107177635 - RLTR23 LTR ERV1 -3 427 11 1 684 1207 320 39 15 chr13 13106692 13107101 -107177211 + Lx6 LINE L1 7019 7437 -23 1 85 589 185 14 65 chr13 13107143 13107282 -107177030 + L1_Mur3 LINE L1 2894 3025 -2855 1 685 3238 149 12 22 chr13 13107283 13107874 -107176438 - L1_Mur1 LINE L1 -1290 4587 4003 1 685 35593 17 2 6 chr13 13107859 13114451 -107169861 - L1Md_A LINE L1 0 6582 20 1 685 4037 168 47 27 chr13 13114444 13114768 -107169544 - L1_Mur1 LINE L1 -1855 4031 3718 1 685 190 0 32 32 chr13 13114768 13114799 -107169513 + (TTA)n Simple_repeat Simple_repeat 3 33 0 1 685 4037 168 47 27 chr13 13114799 13115412 -107168900 - L1_Mur1 LINE L1 -2169 3717 3076 1 685 395 188 0 0 chr13 13117184 13117248 -107167064 + 5S rRNA rRNA 27 90 -31 1 685 410 286 37 15 chr13 13117916 13118051 -107166261 - MTEa LTR MaLR -125 254 117 1 685 1435 243 55 71 chr13 13118122 13118556 -107165756 - RMER19C LTR ERVK -107 504 78 1 685 781 278 21 21 chr13 13118631 13118921 -107165391 + Lx8 LINE L1 5501 5790 -57 1 685 1167 338 57 45 chr13 13119183 13120031 -107164281 + Lx8 LINE L1 6127 6984 -489 1 685 3178 102 4 2 chr13 13121328 13121782 -107162530 + L1_Mus1 LINE L1 6113 6567 0 1 685 261 0 0 0 chr13 13121976 13122005 -107162307 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 685 248 0 31 0 chr13 13122006 13122038 -107162274 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 685 10627 86 18 1 chr13 13123310 13124991 -107159321 - L1Md_F2 LINE L1 -574 6008 4311 1 685 689 122 60 22 chr13 13125676 13125810 -107158502 - RMER19C LTR ERVK -472 139 1 1 685 236 238 0 0 chr13 13125820 13125883 -107158429 - L1_Mur3 LINE L1 -1789 4091 4029 1 685 621 270 81 10 chr13 13126381 13126579 -107157733 - B3 SINE B2 -3 213 2 1 685 1092 182 30 0 chr13 13126703 13126906 -107157406 + ORR1B1 LTR MaLR 1 209 -185 1 685 2659 43 6 0 chr13 13126910 13127234 -107157078 + IAPLTR3 LTR ERVK 1 326 0 1 685 10497 45 26 68 chr13 13127234 13128770 -107155542 + IAPLTR3-int LTR ERVK 1 1472 -5349 1 685 12108 29 14 5 chr13 13128768 13130254 -107154058 + IAPLTR3-int LTR ERVK 5304 6801 -20 1 685 2630 49 6 0 chr13 13130254 13130578 -107153734 + IAPLTR3 LTR ERVK 1 326 0 1 685 877 174 6 6 chr13 13130599 13130755 -107153557 + ORR1B1 LTR MaLR 233 388 -6 1 685 1689 248 41 54 chr13 13131361 13131770 -107152542 - Lx7 LINE L1 0 7696 7296 1 685 3399 28 5 0 chr13 13131770 13132164 -107152148 + MTA_Mm LTR MaLR 1 396 0 1 685 1689 248 41 54 chr13 13132164 13132386 -107151926 - Lx7 LINE L1 -401 7295 7073 1 685 352 301 31 87 chr13 13132523 13132752 -107151560 - Lx9 LINE L1 -464 7180 6965 1 685 4374 152 79 34 chr13 13132815 13133717 -107150595 + L1VL2 LINE L1 65 1006 -5329 1 685 2260 104 10 0 chr13 13133713 13134098 -107150214 + MusHAL1 LINE L1 226 614 -2098 1 685 2558 63 42 3 chr13 13134098 13134430 -107149882 + IAPLTR4 LTR ERVK 1 345 0 1 685 446 217 17 34 chr13 13134430 13134549 -107149763 + IAPLTR3-int LTR ERVK 1 117 -6704 1 685 290 190 0 129 chr13 13134549 13134688 -107149624 + IAPLTR3-int LTR ERVK 834 954 -5867 1 685 345 136 7 145 chr13 13134657 13134795 -107149517 + MMERVK10C-int LTR ERVK 834 952 -6629 1 685 1214 218 114 44 chr13 13134915 13135395 -107148917 + RMER16-int LTR ERVK 255 668 -5469 1 685 437 230 88 0 chr13 13135398 13135511 -107148801 + RMER16-int LTR ERVK 938 1060 -5077 1 685 665 134 0 9 chr13 13135627 13135740 -107148572 + RLTR45-int LTR ERVK 2635 2746 -4660 1 685 5889 87 63 9 chr13 13135743 13136932 -107147380 + RLTR45-int LTR ERVK 3555 4596 -2648 1 685 446 189 12 35 chr13 13136937 13137059 -107147253 + MMETn-int LTR ERVK 2357 2462 -2382 1 685 747 117 28 28 chr13 13137074 13137215 -107147097 + IAPLTR3-int LTR ERVK 4530 4670 -2911 1 685 5639 242 36 31 chr13 13137326 13139851 -107144461 + IAPLTR3-int LTR ERVK 5068 7329 -351 1 685 2597 59 3 3 chr13 13139851 13140191 -107144121 + IAPLTR4 LTR ERVK 1 340 -5 1 685 23309 127 11 1 chr13 13140196 13144903 -107139409 + L1_Mus1 LINE L1 1813 6565 -2 1 685 382 345 39 42 chr13 13144927 13145233 -107139079 + L1M2 LINE L1 3647 3951 -2192 1 685 534 181 0 0 chr13 13145388 13145493 -107138819 + (TA)n Simple_repeat Simple_repeat 2 106 0 1 685 2354 98 111 8 chr13 13145502 13145861 -107138451 - MTA_Mm LTR MaLR 0 396 1 1 685 20927 172 24 17 chr13 13145961 13152191 -107132121 + Lx LINE L1 395 6650 -4 1 685 266 266 0 0 chr13 13152589 13152653 -107131659 + CT-rich Low_complexity Low_complexity 3 66 0 1 685 51 89 0 0 chr13 13152930 13153065 -107131247 + AT_rich Low_complexity Low_complexity 1 135 0 1 685 8005 130 39 3 chr13 13153077 13154129 -107130183 - Lx3_Mus LINE L1 -4 7005 5909 1 685 258 32 0 0 chr13 13154129 13154160 -107130152 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 685 468 0 0 0 chr13 13154160 13154211 -107130101 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 685 11842 103 15 8 chr13 13154211 13156139 -107128173 - Lx3_Mus LINE L1 -1101 5908 3969 1 685 543 183 0 0 chr13 13156318 13156422 -107127890 - Lx2A1 LINE L1 -546 6462 6359 1 685 3310 147 35 0 chr13 13156423 13156966 -107127346 + Lx2A1 LINE L1 6430 6991 -17 1 685 832 102 23 0 chr13 13157171 13157299 -107127013 - L1_Mm LINE L1 -1314 4569 4439 1 685 747 273 137 42 chr13 13157301 13157637 -107126675 + RLTR9A LTR ERVK 1 368 0 1 685 240 35 0 0 chr13 13158064 13158093 -107126219 + (GA)n Simple_repeat Simple_repeat 1 29 0 1 685 4830 186 88 46 chr13 13158093 13159673 -107124639 + RMER16-int LTR ERVK 267 2542 -4864 1 685 14574 131 38 23 chr13 13159963 13161251 -107123061 + RMER16-int LTR ERVK 1566 2877 -2529 1 685 315 49 0 0 chr13 13161251 13161292 -107123020 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 685 14574 131 38 23 chr13 13161292 13162733 -107121579 + RMER16-int LTR ERVK 2878 4336 -1070 1 685 517 335 11 7 chr13 13162730 13163004 -107121308 + RLTR6-int LTR ERV1 7387 7661 -117 1 685 500 267 191 38 chr13 13163358 13163677 -107120635 + RLTR9A LTR ERVK 1 368 0 1 685 10796 188 20 12 chr13 13163677 13166074 -107118238 - L1_Mur1 LINE L1 -1441 4445 2029 1 685 6463 173 10 20 chr13 13166089 13168178 -107116134 + Lx LINE L1 4569 6648 -6 1 685 759 236 35 9 chr13 13168177 13168371 -107115941 - Lx6 LINE L1 -332 7128 6950 1 685 199 109 35 35 chr13 13169216 13169273 -107115039 + (TCTCTG)n Simple_repeat Simple_repeat 3 59 0 1 685 21 0 0 0 chr13 13172695 13172716 -107111596 + AT_rich Low_complexity Low_complexity 1 21 0 1 685 39 0 0 0 chr13 13173192 13173231 -107111081 + AT_rich Low_complexity Low_complexity 1 39 0 1 685 225 310 40 89 chr13 13173482 13173606 -107110706 + MTE-int LTR MaLR 906 1023 -557 1 685 27 0 0 0 chr13 13173878 13173905 -107110407 + AT_rich Low_complexity Low_complexity 1 27 0 1 685 30 97 0 0 chr13 13174114 13174207 -107110105 + AT_rich Low_complexity Low_complexity 1 93 0 1 685 813 216 0 0 chr13 13174379 13174527 -107109785 + B1_Mur4 SINE Alu 1 148 -2 1 685 24 77 0 0 chr13 13174947 13174999 -107109313 + AT_rich Low_complexity Low_complexity 1 52 0 1 685 538 337 77 49 chr13 13175010 13175400 -107108912 - Lx8 LINE L1 -72 7401 7001 1 685 2144 111 62 12 chr13 13175439 13175776 -107108536 - MTB LTR MaLR -31 369 16 1 685 1518 342 58 35 chr13 13175852 13176800 -107107512 - Lx8 LINE L1 -625 6848 5879 1 685 518 103 73 0 chr13 13176809 13176945 -107107367 + CT-rich Low_complexity Low_complexity 2 147 0 1 685 3981 288 105 28 chr13 13176946 13177868 -107106444 - Lx8 LINE L1 -1132 5876 4920 1 685 180 0 0 0 chr13 13177868 13177888 -107106424 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 685 3981 288 104 28 chr13 13177888 13179197 -107105115 - Lx8 LINE L1 -961 4919 3455 1 685 1348 305 17 12 chr13 13179344 13179752 -107104560 - Lx6 LINE L1 -40 7420 7011 1 685 469 259 52 17 chr13 13179751 13179924 -107104388 - Lx8 LINE L1 -2533 3347 3169 1 685 1829 144 46 27 chr13 13179981 13180310 -107104002 - Lx LINE L1 0 6654 6320 1 685 471 328 85 0 chr13 13180411 13180588 -107103724 - B3 SINE B2 0 216 25 1 685 6123 99 11 6 chr13 13180600 13181573 -107102739 + L1_Mus3 LINE L1 5470 6446 -192 1 685 1503 236 44 14 chr13 13182019 13182380 -107101932 + ORR1D1 LTR MaLR 1 372 -2 1 685 507 33 0 0 chr13 13184739 13184800 -107099512 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 685 225 0 0 0 chr13 13184800 13184824 -107099488 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 685 1054 254 96 10 chr13 13185110 13185495 -107098817 + MTD LTR MaLR 1 418 -1 1 685 556 277 44 35 chr13 13185519 13185747 -107098565 + MTD-int LTR MaLR 24 253 -1005 1 685 1775 246 20 5 chr13 13185785 13186186 -107098126 - MTD LTR MaLR -12 407 1 1 685 444 312 63 87 chr13 13186306 13186617 -107097695 + MTD-int LTR MaLR 421 636 -622 1 685 1121 62 7 0 chr13 13187906 13188051 -107096261 - B1_Mm SINE Alu -1 146 1 1 685 1538 231 58 42 chr13 13188473 13188764 -107095548 + ORR1B2 LTR MaLR 1 310 -57 1 685 5084 50 0 0 chr13 13188764 13189383 -107094929 + L1Md_F2 LINE L1 5961 6579 -3 1 685 1538 231 58 42 chr13 13189383 13189452 -107094860 + ORR1B2 LTR MaLR 311 367 0 1 685 231 88 0 0 chr13 13190381 13190415 -107093897 + (TA)n Simple_repeat Simple_repeat 1 34 0 1 685 21 36 0 0 chr13 13190423 13190451 -107093861 + AT_rich Low_complexity Low_complexity 1 28 0 1 685 1349 224 124 12 chr13 13192024 13192363 -107091949 + Lx5 LINE L1 6671 7047 -3 1 685 622 196 130 25 chr13 13192884 13193046 -107091266 + RLTR18-int LTR ERVK 4118 4296 -1065 1 685 489 62 0 0 chr13 13193046 13193111 -107091201 + (CATA)n Simple_repeat Simple_repeat 2 66 0 1 685 3312 36 0 0 chr13 13194141 13194534 -107089778 - L1Md_F2 LINE L1 -2 6580 6188 1 685 229 326 49 69 chr13 13194858 13194960 -107089352 + LTR16D LTR ERVL 317 416 -235 1 685 369 61 8 47 chr13 13194906 13194981 -107089331 - B1_Mm SINE Alu 0 147 49 1 685 405 0 0 0 chr13 13196364 13196409 -107087903 + (TGGA)n Simple_repeat Simple_repeat 2 46 0 1 685 297 0 0 0 chr13 13197854 13197887 -107086425 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 685 1152 36 0 0 chr13 13197902 13198039 -107086273 + B1_Mm SINE Alu 2 138 -9 1 685 297 68 0 0 chr13 13198039 13198083 -107086229 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1 685 664 291 91 78 chr13 13198114 13199201 -107085111 + L1M2 LINE L1 4292 5392 -751 1 685 234 204 134 41 chr13 13199415 13199512 -107084800 + Lx8 LINE L1 7359 7464 -9 1 685 2519 315 77 36 chr13 13199990 13201743 -107082569 + Lx9 LINE L1 5693 7637 -7 1 685 227 79 0 26 chr13 13201770 13201809 -107082503 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 685 606 311 14 56 chr13 13201817 13202024 -107082288 + B3A SINE B2 7 216 0 1 685 276 346 29 7 chr13 13203060 13203197 -107081115 + Lx8 LINE L1 6577 6716 -757 1 685 277 270 121 28 chr13 13203809 13203950 -107080362 + RMER15 LTR ERVL 328 481 -94 1 685 259 240 134 61 chr13 13204943 13205107 -107079205 + MIRc SINE MIR 92 267 -1 1 685 215 179 36 0 chr13 13206770 13206826 -107077486 + A-rich Low_complexity Low_complexity 3 60 0 1 685 801 220 0 0 chr13 13207294 13207444 -107076868 - B1_Mur4 SINE Alu 0 150 1 2 685 30 97 0 0 chr13 13207616 13207709 -107076603 + AT_rich Low_complexity Low_complexity 1 93 0 2 685 27 0 0 0 chr13 13207918 13207945 -107076367 + AT_rich Low_complexity Low_complexity 1 27 0 2 685 32 26 0 0 chr13 13208591 13208630 -107075682 + AT_rich Low_complexity Low_complexity 1 39 0 2 685 21 0 0 0 chr13 13209111 13209132 -107075180 + AT_rich Low_complexity Low_complexity 1 21 0 2 685 790 30 59 15 chr13 13212557 13212692 -107071620 + (CAGAGA)n Simple_repeat Simple_repeat 3 143 0 2 685 745 239 34 7 chr13 13213548 13213741 -107070571 + Lx6 LINE L1 6950 7127 -333 2 685 1732 147 48 25 chr13 13213741 13214056 -107070256 - Lx LINE L1 -6 6648 6327 2 685 5310 180 20 16 chr13 13214058 13215131 -107069181 + L1_Mur2 LINE L1 3360 4436 -1441 2 685 463 289 179 25 chr13 13215131 13215450 -107068862 - RLTR9A LTR ERVK 0 368 1 2 685 257 263 47 71 chr13 13215550 13215677 -107068635 - RLTR44-int LTR ERVK -38 2774 2651 2 685 609 314 22 18 chr13 13215800 13216076 -107068236 - RLTR6-int LTR ERV1 -115 7663 7387 2 685 15647 130 40 22 chr13 13216071 13217515 -107066797 - RMER16-int LTR ERVK -1068 4338 2877 2 685 341 22 0 21 chr13 13217515 13217562 -107066750 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 685 15647 132 39 21 chr13 13217562 13218856 -107065456 - RMER16-int LTR ERVK -2530 2876 1568 2 685 760 240 11 141 chr13 13219130 13219449 -107064863 - RMER16-int LTR ERVK -3709 3535 3279 2 685 1537 121 9 0 chr13 13219556 13219787 -107064525 - RMER16-int LTR ERVK -3840 1566 1334 2 685 7946 51 2 4 chr13 13219787 13219808 -107064504 - L1Md_F3 LINE L1 -8 6576 6559 2 685 405 0 0 0 chr13 13219808 13219853 -107064459 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 685 29482 51 26 7 chr13 13219853 13225724 -107058588 - L1Md_F3 LINE L1 -26 6558 622 2 685 3452 178 123 24 chr13 13225730 13226642 -107057670 - RMER16-int LTR ERVK -4086 1320 267 2 685 489 34 0 0 chr13 13226642 13226701 -107057611 + (TC)n Simple_repeat Simple_repeat 1 59 0 2 685 749 272 129 50 chr13 13227129 13227470 -107056842 - RLTR9A LTR ERVK 0 368 1 2 685 872 94 23 0 chr13 13227472 13227600 -107056712 + L1_Mm LINE L1 4439 4569 -1314 2 685 215 31 0 30 chr13 13227772 13227805 -107056507 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 2 685 3352 144 36 0 chr13 13227812 13228366 -107055946 - Lx2A1 LINE L1 -5 7003 6430 2 685 632 154 0 0 chr13 13228367 13228471 -107055841 + Lx2A1 LINE L1 6359 6462 -546 2 685 12501 104 16 3 chr13 13228653 13230570 -107053742 + Lx3_Mus LINE L1 3969 5906 -1103 2 685 288 0 0 0 chr13 13230570 13230602 -107053710 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 685 8448 124 43 3 chr13 13230602 13231625 -107052687 + Lx3_Mus LINE L1 5907 6977 -32 2 685 2837 70 8 5 chr13 13231626 13232015 -107052297 + RLTR10 LTR ERVK 1 390 0 2 685 376 93 0 0 chr13 13232017 13232071 -107052241 + RLTR10-int LTR ERVK 3 56 -1931 2 685 3705 23 16 2 chr13 13232086 13232523 -107051789 - RLTR10-int LTR ERVK -555 1432 990 2 685 7920 44 1 0 chr13 13232599 13233546 -107050766 - RLTR10-int LTR ERVK -999 988 41 2 685 2177 103 16 9 chr13 13233558 13233881 -107050431 - IAPLTR2b LTR ERVK -2 325 1 2 685 225 265 12 47 chr13 13233896 13234066 -107050246 + A-rich Low_complexity Low_complexity 2 165 0 2 685 290 269 0 0 chr13 13234337 13234404 -107049908 + GA-rich Low_complexity Low_complexity 3 69 0 2 85 23058 168 24 13 chr13 13234817 13241023 -107043289 - Lx LINE L1 -4 6650 395 2 686 2475 93 87 8 chr13 13241138 13241505 -107042807 + MTA_Mm LTR MaLR 1 396 0 2 686 372 152 0 0 chr13 13241506 13241572 -107042740 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 686 192 40 0 0 chr13 13241977 13242002 -107042310 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2 686 27240 133 28 8 chr13 13242054 13248155 -107036157 - L1_Mus1 LINE L1 -2 6565 364 2 686 1691 230 50 47 chr13 13248221 13248759 -107035553 + Lx7 LINE L1 7157 7696 0 2 686 1920 199 29 3 chr13 13249363 13249741 -107034571 - ORR1B1 LTR MaLR -6 388 1 2 686 603 281 81 10 chr13 13249865 13250063 -107034249 + B3 SINE B2 2 213 -3 2 686 470 332 153 15 chr13 13250218 13250624 -107033688 + L1M2 LINE L1 3660 4121 -2022 2 686 713 114 60 22 chr13 13250635 13250769 -107033543 + RMER19C LTR ERVK 1 139 -472 2 686 9734 68 3 1 chr13 13251453 13252728 -107031584 + L1Md_F2 LINE L1 4308 5585 -298 2 686 7200 76 19 2 chr13 13252730 13253707 -107030605 + L1Md_F2 LINE L1 5588 6581 -1 2 686 1254 281 106 5 chr13 13254154 13254522 -107029790 - MTD LTR MaLR -14 405 1 2 686 425 244 531 5 chr13 13254626 13254828 -107029484 - L1_Mur3 LINE L1 -2077 3803 3496 2 686 23 33 0 0 chr13 13255032 13255062 -107029250 + AT_rich Low_complexity Low_complexity 1 30 0 2 686 237 306 0 0 chr13 13255193 13255265 -107029047 - RMER15 LTR ERVL -126 449 378 2 686 248 0 31 0 chr13 13256520 13256552 -107027760 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 686 3380 77 4 2 chr13 13256764 13257218 -107027094 - L1_Mus1 LINE L1 0 6567 6113 2 686 1289 328 75 113 chr13 13258486 13259168 -107025144 - Lx8 LINE L1 -460 7013 6411 2 686 218 32 32 0 chr13 13259168 13259199 -107025113 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2 686 6121 54 1 5 chr13 13259205 13259984 -107024328 - L1Md_F2 LINE L1 0 6582 5807 2 686 1289 304 58 83 chr13 13259984 13260858 -107023454 - Lx8 LINE L1 -1063 6410 5476 2 686 1380 238 141 80 chr13 13260909 13261412 -107022900 + RMER19C LTR ERVK 78 611 0 2 686 417 286 37 15 chr13 13261416 13261551 -107022761 + MTEa LTR MaLR 117 254 -125 2 686 357 266 44 44 chr13 13261994 13262108 -107022204 - AmnSINE1 SINE SINE -435 140 27 2 686 391 188 0 0 chr13 13262047 13262111 -107022201 - 5S rRNA rRNA -31 90 27 2 686 7512 164 20 16 chr13 13263860 13265374 -107018938 + L1_Mur1 LINE L1 3075 4595 -1291 2 686 589 185 14 65 chr13 13265376 13265515 -107018797 - L1_Mur3 LINE L1 -2855 3025 2894 2 686 1211 320 39 15 chr13 13265555 13265964 -107018348 - Lx6 LINE L1 -23 7437 7019 2 686 2000 135 40 107 chr13 13265979 13266426 -107017886 + RLTR23 LTR ERV1 11 427 -3 2 686 558 269 84 7 chr13 13266433 13266575 -107017737 - Lx5 LINE L1 -420 6630 6478 2 686 2133 85 82 0 chr13 13266600 13266905 -107017407 - L1Md_F2 LINE L1 -2 6580 6251 2 686 576 301 35 25 chr13 13266913 13267111 -107017201 - Lx6 LINE L1 -1188 6272 6073 2 686 4104 187 46 41 chr13 13267119 13267604 -107016708 + RLTR25A LTR ERVK 5 503 -600 2 686 329 21 0 59 chr13 13267604 13267655 -107016657 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 2 686 4104 187 46 41 chr13 13267655 13267673 -107016639 + RLTR25A LTR ERVK 504 514 -589 2 686 207 0 0 0 chr13 13267673 13267696 -107016616 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 686 4104 187 46 41 chr13 13267696 13268067 -107016245 + RLTR25A LTR ERVK 515 884 -219 2 686 273 235 35 0 chr13 13268091 13268176 -107016136 - Lx6 LINE L1 -1385 6075 5988 2 686 380 274 10 19 chr13 13268566 13268670 -107015642 - Lx6 LINE L1 -1467 5993 5891 2 686 2551 196 52 52 chr13 13268690 13269321 -107014991 - Lx6 LINE L1 -44 5833 5203 2 686 5704 212 30 81 chr13 13269321 13269989 -107014323 - Lx6 LINE L1 -2075 3802 3184 2 686 2676 107 53 14 chr13 13269989 13270405 -107013907 - Lx3A LINE L1 -10 6971 6540 2 686 5704 212 30 81 chr13 13270405 13271425 -107012887 - Lx6 LINE L1 -2694 3183 2199 2 686 335 51 102 0 chr13 13271485 13271544 -107012768 - L1_Mus2 LINE L1 -1 6565 6501 2 686 1330 137 59 42 chr13 13271544 13271827 -107012485 + Lx LINE L1 6346 6654 0 2 686 392 363 117 37 chr13 13272063 13272363 -107011949 - MTEa LTR MaLR -55 324 1 2 686 957 359 64 8 chr13 13272422 13272925 -107011387 - MTEa-int LTR MaLR -14 1356 826 2 686 243 196 20 0 chr13 13273468 13273519 -107010793 - MTEb LTR MaLR -322 57 6 2 686 261 0 0 0 chr13 13275421 13275450 -107008862 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2 686 5680 129 18 6 chr13 13275452 13276343 -107007969 - Lx3_Mus LINE L1 -23 6986 6085 2 686 452 290 42 32 chr13 13276455 13276644 -107007668 + Lx8 LINE L1 7102 7292 -181 2 686 215 319 16 96 chr13 13277433 13277558 -107006754 + B2_Mm2 SINE B2 32 146 -49 2 686 206 118 0 0 chr13 13277900 13277934 -107006378 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2 686 360 62 31 15 chr13 13278538 13278603 -107005709 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 2 686 648 147 15 7 chr13 13278639 13278776 -107005536 + (TA)n Simple_repeat Simple_repeat 2 139 0 2 686 4722 259 50 31 chr13 13278777 13280110 -107004202 - Lx6 LINE L1 -53 7407 6050 2 686 318 189 62 10 chr13 13281018 13281114 -107003198 + Lx9 LINE L1 7354 7454 -190 2 686 441 0 0 0 chr13 13281150 13281199 -107003113 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 686 694 216 7 0 chr13 13281234 13281373 -107002939 + B1_Mus1 SINE Alu 4 143 -5 2 686 21 0 0 0 chr13 13281493 13281514 -107002798 + AT_rich Low_complexity Low_complexity 1 21 0 2 686 209 77 0 49 chr13 13283135 13283176 -107001136 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 2 686 977 111 14 0 chr13 13284391 13284535 -106999777 + B1_Mus1 SINE Alu 3 148 0 2 686 294 165 0 0 chr13 13284535 13284614 -106999698 + A-rich Low_complexity Low_complexity 1 79 0 2 686 4870 138 20 1 chr13 13285040 13285826 -106998486 - L1_Mm LINE L1 -64 5819 5019 2 686 4120 90 7 112 chr13 13285826 13286540 -106997772 + L1_Mus3 LINE L1 5600 6238 -400 2 686 11909 151 26 7 chr13 13286531 13287534 -106996778 - L1_Mm LINE L1 -1984 3899 2889 2 686 537 16 0 0 chr13 13287534 13287596 -106996716 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 2 686 11909 151 26 7 chr13 13287596 13288792 -106995520 - L1_Mm LINE L1 -2995 2888 1659 2 686 468 0 0 0 chr13 13289870 13289922 -106994390 + (TGGA)n Simple_repeat Simple_repeat 3 54 0 2 686 695 286 94 79 chr13 13291387 13292510 -106991802 + L1M2 LINE L1 4253 5392 -751 2 686 234 204 134 41 chr13 13292724 13292821 -106991491 + Lx8 LINE L1 7359 7464 -9 2 686 2602 309 81 39 chr13 13293299 13295050 -106989262 + Lx9 LINE L1 5693 7637 -7 2 686 230 81 0 26 chr13 13295072 13295110 -106989202 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 2 686 606 311 14 56 chr13 13295118 13295325 -106988987 + B3A SINE B2 7 216 0 2 686 276 346 29 7 chr13 13296347 13296484 -106987828 + Lx8 LINE L1 6577 6716 -757 2 686 279 270 121 28 chr13 13297096 13297237 -106987075 + RMER15 LTR ERVL 328 481 -94 2 686 259 240 134 61 chr13 13298230 13298394 -106985918 + MIRc SINE MIR 92 267 -1 2 686 202 217 0 0 chr13 13299845 13299891 -106984421 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 2 686 233 170 0 36 chr13 13300054 13300109 -106984203 + A-rich Low_complexity Low_complexity 3 55 0 2 686 3007 52 29 0 chr13 13300264 13300645 -106983667 + L1Md_F2 LINE L1 6188 6579 -3 2 686 561 55 0 0 chr13 13301661 13301734 -106982578 + (TATG)n Simple_repeat Simple_repeat 2 74 0 2 686 622 196 130 25 chr13 13301734 13301896 -106982416 - RLTR18-int LTR ERVK -1065 4296 4118 2 686 1362 221 124 12 chr13 13302417 13302756 -106981556 - Lx5 LINE L1 -3 7047 6671 2 686 21 36 0 0 chr13 13304320 13304348 -106979964 + AT_rich Low_complexity Low_complexity 1 28 0 3 686 369 93 0 0 chr13 13304358 13304412 -106979900 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 686 1538 231 58 42 chr13 13305341 13305410 -106978902 - ORR1B2 LTR MaLR 0 367 311 3 686 5074 52 0 0 chr13 13305410 13306030 -106978282 - L1Md_F2 LINE L1 -2 6580 5961 3 686 1538 231 58 42 chr13 13306030 13306321 -106977991 - ORR1B2 LTR MaLR -57 310 1 3 686 1117 62 7 0 chr13 13306806 13306952 -106977360 + B1_Mm SINE Alu 1 147 0 3 686 686 308 89 96 chr13 13308315 13308670 -106975642 - MTD-int LTR MaLR -622 636 289 3 686 1636 249 22 5 chr13 13308670 13309082 -106975230 + MTD LTR MaLR 1 419 0 3 686 686 308 89 96 chr13 13309082 13309277 -106975035 - MTD-int LTR MaLR -970 288 85 3 686 2948 62 0 0 chr13 13309277 13309634 -106974678 + IAPEY2_LTR LTR ERVK 1 357 0 3 686 686 308 89 96 chr13 13309634 13309699 -106974613 - MTD-int LTR MaLR -1174 84 25 3 686 1056 260 96 8 chr13 13309723 13310107 -106974205 - MTD LTR MaLR -1 418 1 3 686 21 89 0 0 chr13 13310419 13310475 -106973837 + AT_rich Low_complexity Low_complexity 1 56 0 3 686 22 35 0 0 chr13 13311021 13311050 -106973262 + AT_rich Low_complexity Low_complexity 1 29 0 3 686 710 218 121 57 chr13 13312229 13312526 -106971786 - ETnERV-int LTR ERVK -2996 318 3 3 686 5577 230 71 25 chr13 13312516 13312528 -106971784 - MERVL_2A-int LTR ERVL -4140 1621 1610 3 686 2814 78 15 10 chr13 13312528 13312929 -106971383 - RLTR9D LTR ERVK 0 403 1 3 686 5577 230 71 25 chr13 13312929 13313707 -106970605 - MERVL_2A-int LTR ERVL -4152 1609 784 3 686 468 0 0 0 chr13 13313707 13313759 -106970553 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 686 5577 230 71 25 chr13 13313759 13314517 -106969795 - MERVL_2A-int LTR ERVL -4978 783 2 3 686 953 264 139 80 chr13 13314517 13315019 -106969293 - MT2A LTR ERVL 0 533 2 3 686 26 0 0 0 chr13 13315136 13315162 -106969150 + AT_rich Low_complexity Low_complexity 1 26 0 3 686 5536 115 9 0 chr13 13315694 13316538 -106967774 - L1_Mm LINE L1 -1489 4394 3543 3 686 2564 61 0 44 chr13 13316535 13316898 -106967414 + L1_Mus3 LINE L1 5682 6028 -610 3 686 7409 32 2 2 chr13 13317314 13318201 -106966111 - L1Md_F3 LINE L1 -1 6583 5697 3 686 4090 128 55 38 chr13 13318195 13319142 -106965170 + L1_Mus3 LINE L1 5593 6618 -20 3 686 735 263 146 48 chr13 13319251 13319672 -106964640 - Lx6 LINE L1 -358 7102 6621 3 686 2457 87 87 0 chr13 13319673 13320051 -106964261 + RLTR10A LTR ERVK 1 411 0 3 686 469 281 107 7 chr13 13320051 13320191 -106964121 - Lx6 LINE L1 -846 6614 6461 3 686 287 310 8 72 chr13 13320187 13320312 -106964000 + Lx6 LINE L1 7102 7218 -242 3 686 2801 215 2 41 chr13 13320312 13320903 -106963409 + Lx2B LINE L1 6411 6978 -22 3 686 219 69 0 0 chr13 13320904 13320933 -106963379 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 686 1059 251 8 8 chr13 13320938 13321183 -106963129 + Lx6 LINE L1 7211 7455 -5 3 686 228 35 0 0 chr13 13321812 13321841 -106962471 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 686 198 0 0 0 chr13 13321841 13321862 -106962450 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 3 686 1169 62 0 0 chr13 13321870 13322016 -106962296 - B1_Mus2 SINE Alu 0 147 2 3 686 260 240 231 7 chr13 13322040 13322187 -106962125 + Lx7 LINE L1 5118 5297 -583 3 686 1024 261 91 82 chr13 13322183 13322498 -106961814 + Lx7 LINE L1 5497 5766 -114 3 686 1116 75 0 14 chr13 13322498 13322646 -106961666 - B1_Mus2 SINE Alu 0 147 2 3 686 1051 292 69 68 chr13 13322646 13323505 -106960807 + Lx7 LINE L1 5765 6734 -962 3 686 1205 153 27 31 chr13 13323498 13323720 -106960592 - Lx3C LINE L1 -477 6499 6279 3 686 252 0 0 0 chr13 13323722 13323750 -106960562 + (T)n Simple_repeat Simple_repeat 1 28 0 3 686 1444 182 54 35 chr13 13325235 13325548 -106958764 - Lx3C LINE L1 -686 6290 5972 3 686 3192 170 58 49 chr13 13325548 13326216 -106958096 - RLTR25B LTR ERVK -350 678 5 3 686 1570 124 144 14 chr13 13326745 13327030 -106957282 - Lx LINE L1 -8 6646 6325 3 686 297 122 0 20 chr13 13327736 13327786 -106956526 + RLTR25B LTR ERVK 980 1028 0 3 686 1689 304 59 31 chr13 13327786 13328162 -106956150 - Lx9 LINE L1 -528 7116 6750 3 686 2272 85 36 6 chr13 13328162 13328492 -106955820 + L1Md_F2 LINE L1 6231 6570 -12 3 686 1689 304 59 31 chr13 13328492 13328845 -106955467 - Lx9 LINE L1 -895 6749 6368 3 686 369 0 0 0 chr13 13328866 13328907 -106955405 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 686 1894 292 60 23 chr13 13328964 13329779 -106954533 - Lx9 LINE L1 -1540 6104 5246 3 686 216 0 0 0 chr13 13329779 13329803 -106954509 + (TTG)n Simple_repeat Simple_repeat 1 24 0 3 686 1894 279 65 14 chr13 13329803 13329883 -106954429 - Lx9 LINE L1 -602 5245 5148 3 686 534 327 25 0 chr13 13329892 13330051 -106954261 - B3 SINE B2 -53 163 1 3 686 321 226 104 0 chr13 13330091 13330197 -106954115 - Lx9 LINE L1 -4446 1401 1285 3 686 26 30 0 0 chr13 13331024 13331057 -106953255 + AT_rich Low_complexity Low_complexity 1 33 0 3 686 2833 43 3 0 chr13 13332216 13332561 -106951751 - ORR1A1 LTR MaLR 0 346 1 3 686 8707 106 35 36 chr13 13332561 13334131 -106950181 - ORR1A1-int LTR MaLR 0 1509 1 3 686 2716 72 0 6 chr13 13334131 13334479 -106949833 - ORR1A1 LTR MaLR 0 346 1 3 686 432 0 0 0 chr13 13335804 13335852 -106948460 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 686 1186 193 9 0 chr13 13340573 13340796 -106943516 + URR1A DNA MER1_type 1 225 -1 3 686 364 379 27 8 chr13 13340873 13341131 -106943181 - RMER15-int LTR ERVL -231 4768 4506 3 686 956 104 0 0 chr13 13342880 13343014 -106941298 + B1_Mus1 SINE Alu 2 135 -13 3 686 270 0 0 0 chr13 13343018 13343048 -106941264 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 686 30272 133 18 14 chr13 13345026 13351304 -106933008 - L1_Mus1 LINE L1 -1 6566 261 3 686 3357 54 28 7 chr13 13351700 13352127 -106932185 + RLTR10C LTR ERVK 1 436 0 3 686 2789 113 2 2 chr13 13352287 13352687 -106931625 - MTB LTR MaLR 0 400 1 3 686 925 297 51 9 chr13 13353179 13353512 -106930800 - Lx8 LINE L1 -1461 6012 5666 3 686 369 270 63 0 chr13 13353497 13353623 -106930689 + L1_Mur3 LINE L1 4890 5023 -857 3 686 340 186 140 9 chr13 13354033 13354147 -106930165 - Lx4B LINE L1 -3 7055 6927 3 686 705 251 36 11 chr13 13354143 13354352 -106929960 - Lx4B LINE L1 -320 6738 6560 3 686 2141 139 105 0 chr13 13355656 13356029 -106928283 - RLTR44B LTR ERVK 0 449 38 3 686 1202 266 99 11 chr13 13356032 13356587 -106927725 + L1_Mur3 LINE L1 1425 2028 -3852 3 686 21840 91 30 2 chr13 13356596 13360547 -106923765 + L1Md_F2 LINE L1 374 4436 -1447 3 686 1288 75 0 0 chr13 13360545 13360705 -106923607 + L1Md_F2 LINE L1 5427 5586 -297 3 686 7007 82 24 5 chr13 13360706 13361680 -106922632 + L1Md_F2 LINE L1 5588 6579 -3 3 686 1569 268 41 1 chr13 13361718 13362301 -106922011 + L1_Mur3 LINE L1 2064 2697 -3449 3 686 235 323 76 29 chr13 13362579 13362751 -106921561 - RMER15 LTR ERVL -14 561 382 3 686 876 131 17 17 chr13 13364222 13364297 -106920015 + polypyrimidine Low_complexity Low_complexity 108 180 0 3 686 1308 79 0 0 chr13 13364297 13364475 -106919837 + (TC)n Simple_repeat Simple_repeat 2 179 0 3 686 876 131 17 17 chr13 13364475 13364578 -106919734 + polypyrimidine Low_complexity Low_complexity 2 107 0 3 686 1199 307 74 50 chr13 13364888 13365622 -106918690 + MTE-int LTR MaLR 675 1572 -8 3 686 427 327 131 18 chr13 13365737 13365958 -106918354 + MTEa LTR MaLR 121 366 -13 3 686 1488 186 120 73 chr13 13366528 13366952 -106917360 - RMER1C Other Other -2 1340 897 3 686 1060 95 0 0 chr13 13368319 13368466 -106915846 + B1_Mus1 SINE Alu 2 148 0 3 686 240 111 0 0 chr13 13368466 13368502 -106915810 + (A)n Simple_repeat Simple_repeat 1 36 0 3 85 6540 100 6 0 chr13 13368566 13369769 -106914543 + L1VL1 LINE L1 193 1404 -2294 3 687 8383 131 82 2 chr13 13369768 13372067 -106912245 - L1Md_F LINE L1 -3195 2688 204 3 687 19809 104 55 4 chr13 13372066 13375990 -106908322 - L1_Mur1 LINE L1 -1397 4489 208 3 687 224 56 0 27 chr13 13376127 13376139 -106908173 + (TA)n Simple_repeat Simple_repeat 2 13 0 3 687 329 75 0 19 chr13 13376139 13376193 -106908119 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 687 224 56 0 27 chr13 13376193 13376217 -106908095 + (TA)n Simple_repeat Simple_repeat 1 23 0 3 687 27 29 0 0 chr13 13376900 13376934 -106907378 + AT_rich Low_complexity Low_complexity 1 34 0 3 687 1306 344 73 27 chr13 13377148 13377956 -106906356 - Lx8 LINE L1 -272 7201 6357 3 687 25 0 0 0 chr13 13378583 13378608 -106905704 + AT_rich Low_complexity Low_complexity 1 25 0 3 687 306 296 37 9 chr13 13378614 13378723 -106905589 + L1M2 LINE L1 3611 3722 -2421 3 687 468 314 139 5 chr13 13378747 13378949 -106905363 - MTE-int LTR MaLR -551 1029 801 3 687 3103 184 2 2 chr13 13379666 13380220 -106904092 - Lx LINE L1 -2 6652 6099 3 687 4949 157 11 12 chr13 13380245 13381103 -106903209 - L1_Mm LINE L1 0 5883 5027 3 687 729 133 35 0 chr13 13381492 13381605 -106902707 + MTC LTR MaLR 5 121 -300 3 687 35389 71 9 0 chr13 13381658 13387868 -106896444 - L1Md_F2 LINE L1 0 6582 399 3 687 607 139 0 10 chr13 13387911 13388013 -106896299 - B2_Mm2 SINE B2 -18 177 77 3 687 468 186 0 0 chr13 13388019 13388105 -106896207 - L1_Mur3 LINE L1 -138 5742 5657 3 687 1317 238 63 20 chr13 13388106 13388406 -106895906 + MTC LTR MaLR 65 377 -44 3 687 652 274 94 30 chr13 13388412 13388871 -106895441 - L1_Rod LINE L1 -2350 3497 3010 3 687 3768 257 57 18 chr13 13388924 13390210 -106894102 - L1_Rod LINE L1 -2994 2853 1511 3 687 835 204 26 21 chr13 13390210 13390400 -106893912 - B2_Mm2 SINE B2 -4 191 1 3 687 3768 257 57 18 chr13 13390400 13390509 -106893803 - L1_Rod LINE L1 -4337 1510 1403 3 687 414 235 20 0 chr13 13390509 13390611 -106893701 - U6 snRNA snRNA 0 107 4 3 687 561 255 78 34 chr13 13390617 13390885 -106893427 - L1_Rod LINE L1 -6487 1121 842 3 687 246 246 18 0 chr13 13391057 13391114 -106893198 - L1_Rod LINE L1 -6963 645 588 3 687 288 0 0 0 chr13 13391120 13391152 -106893160 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 687 2006 305 57 36 chr13 13391234 13391831 -106892481 - Lx6 LINE L1 -27 7433 6817 3 687 1139 88 0 13 chr13 13391831 13391981 -106892331 - B1_Mus1 SINE Alu 0 148 1 3 687 918 83 37 31 chr13 13391983 13392145 -106892167 - L1_Mus3 LINE L1 0 6638 6476 3 687 2006 318 38 24 chr13 13392145 13392605 -106891707 - Lx6 LINE L1 -644 6816 6161 3 687 5886 91 59 86 chr13 13392692 13393137 -106891175 + RLTR13D5 LTR ERVK 53 429 -594 3 687 1151 62 7 0 chr13 13393137 13393283 -106891029 - B1_Mm SINE Alu 0 147 1 3 687 5886 91 59 86 chr13 13393283 13393835 -106890477 + RLTR13D5 LTR ERVK 430 1023 0 3 687 849 203 5 10 chr13 13393835 13394034 -106890278 - Lx6 LINE L1 -1538 5922 5725 3 687 4057 82 7 29 chr13 13394038 13394629 -106889683 - L1Md_F2 LINE L1 0 6582 6005 3 687 1270 87 51 0 chr13 13394634 13394829 -106889483 - L1Md_F2 LINE L1 -15 6567 6363 3 687 6080 144 8 67 chr13 13394829 13395831 -106888481 - L1Md_F2 LINE L1 -573 6009 5160 3 687 1234 41 0 0 chr13 13395831 13395977 -106888335 - B1_Mus2 SINE Alu 0 147 2 3 687 6080 194 12 107 chr13 13395977 13396914 -106887398 - L1Md_F2 LINE L1 -721 5159 4237 3 687 37085 41 1 14 chr13 13396941 13403133 -106881179 - L1Md_A LINE L1 0 6582 475 3 687 1749 193 86 21 chr13 13403133 13403566 -106880746 - L1Md_F2 LINE L1 -1668 4209 3749 3 687 1024 239 157 114 chr13 13403564 13404311 -106880001 - L1Md_F2 LINE L1 -3611 2269 1491 3 687 354 183 0 0 chr13 13404314 13404385 -106879927 + CT-rich Low_complexity Low_complexity 2 72 0 3 687 487 194 62 37 chr13 13404386 13404405 -106879907 - L1Md_F2 LINE L1 -4361 1519 1505 3 687 1154 145 0 5 chr13 13404405 13404592 -106879720 - B2_Mm2 SINE B2 -9 186 1 3 687 487 194 62 37 chr13 13404592 13404620 -106879692 - L1Md_F2 LINE L1 -4376 1504 1478 3 687 624 150 8 30 chr13 13404620 13404751 -106879561 - L1Md_F2 LINE L1 -1 6581 6454 3 687 487 194 62 37 chr13 13404751 13404863 -106879449 - L1Md_F2 LINE L1 -4403 1477 1356 3 687 278 277 197 6 chr13 13404869 13405047 -106879265 - L1Md_F2 LINE L1 -6641 1087 876 3 687 228 67 0 0 chr13 13405980 13406010 -106878302 + (T)n Simple_repeat Simple_repeat 1 30 0 3 687 900 176 0 7 chr13 13406010 13406159 -106878153 - B1_Mus1 SINE Alu 0 148 1 3 687 2848 71 2 37 chr13 13406611 13407021 -106877291 - MTA_Mm LTR MaLR 0 396 1 4 687 7155 86 57 8 chr13 13407021 13408067 -106876245 - MTA_Mm-int LTR MaLR 0 1098 1 4 687 2578 91 64 8 chr13 13408067 13408442 -106875870 - MTA_Mm LTR MaLR 0 396 1 4 687 7095 142 19 28 chr13 13408536 13410432 -106873880 + L1VL4 LINE L1 205 2081 -1478 4 687 1729 147 9 18 chr13 13410429 13410761 -106873551 + L1_Mur2 LINE L1 3565 3893 -1984 4 687 3732 97 11 106 chr13 13410752 13411458 -106872854 - L1_Mus3 LINE L1 -400 6238 5600 4 687 4594 138 22 0 chr13 13411458 13412242 -106872070 + L1_Mm LINE L1 5019 5819 -64 4 687 645 14 0 0 chr13 13412685 13412759 -106871553 + (GTTTG)n Simple_repeat Simple_repeat 2 75 0 4 687 971 84 14 14 chr13 13412759 13412895 -106871417 - B1_Mm SINE Alu -8 139 3 4 687 219 133 0 0 chr13 13414111 13414156 -106870156 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 4 687 564 323 94 4 chr13 13415786 13416019 -106868293 - MIRb SINE MIR -14 254 1 4 687 471 113 0 0 chr13 13416456 13416527 -106867785 + (T)n Simple_repeat Simple_repeat 1 71 0 4 687 248 0 31 0 chr13 13416536 13416568 -106867744 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 687 1193 62 0 0 chr13 13416571 13416717 -106867595 - B1_Mus2 SINE Alu -1 146 1 4 687 1319 229 114 6 chr13 13416717 13417051 -106867261 - ORR1D1 LTR MaLR 0 374 5 4 687 362 314 112 32 chr13 13417328 13417453 -106866859 + ID_B1 SINE B4 84 218 -6 4 687 294 308 129 71 chr13 13417453 13417467 -106866845 + B1F SINE Alu 3 149 0 4 687 408 263 31 10 chr13 13417579 13417675 -106866637 + B4 SINE B4 2 99 -193 4 687 224 348 34 43 chr13 13417675 13417696 -106866616 + B2_Mm1a SINE B2 2 117 -76 4 687 309 281 11 11 chr13 13417692 13417782 -106866530 + RSINE1 SINE B4 76 165 0 4 687 898 135 50 0 chr13 13417909 13418050 -106866262 - B1_Mur3 SINE Alu 0 149 2 4 687 685 209 21 41 chr13 13418072 13418209 -106866103 - B1_Mur4 SINE Alu -1 149 14 4 687 1960 171 41 14 chr13 13418209 13418577 -106865735 - ORR1C1 LTR MaLR 0 378 1 4 687 609 206 119 0 chr13 13418629 13418755 -106865557 + B1_Mm SINE Alu 5 145 -2 4 687 401 321 42 23 chr13 13418840 13419057 -106865255 - B4 SINE B4 -70 222 2 4 687 241 333 49 0 chr13 13420458 13420560 -106863752 - MER58B DNA MER1_type -8 333 227 4 687 243 279 147 0 chr13 13420811 13420879 -106863433 - ID4 SINE ID -4 79 2 4 687 187 222 25 0 chr13 13421044 13421125 -106863187 + (TA)n Simple_repeat Simple_repeat 2 84 0 4 687 863 217 54 0 chr13 13421234 13421418 -106862894 + B3 SINE B2 4 197 -19 4 687 752 193 51 34 chr13 13421761 13421938 -106862374 + U17 snRNA snRNA 28 207 0 4 687 25 31 0 0 chr13 13421966 13421998 -106862314 + AT_rich Low_complexity Low_complexity 1 32 0 4 687 1127 75 7 0 chr13 13422403 13422549 -106861763 + B1_Mus1 SINE Alu 1 147 -1 4 687 1314 160 14 0 chr13 13423373 13423586 -106860726 - URR1B DNA MER1_type -3 222 7 4 687 358 256 98 16 chr13 13425273 13425396 -106858916 - B1F2 SINE Alu -16 133 1 4 687 216 158 0 0 chr13 13425726 13425764 -106858548 + T-rich Low_complexity Low_complexity 1 38 0 4 687 1186 41 0 39 chr13 13426136 13426289 -106858023 - B1_Mus1 SINE Alu 0 148 2 4 687 24 0 0 0 chr13 13427526 13427550 -106856762 + AT_rich Low_complexity Low_complexity 1 24 0 4 687 279 215 0 0 chr13 13428580 13428645 -106855667 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 687 2747 50 7 119 chr13 13429990 13430425 -106853887 - RLTR10 LTR ERVK -4 386 1 4 687 8402 23 0 0 chr13 13430427 13431422 -106852890 - RLTR10-int LTR ERVK -3 1984 990 4 687 274 256 62 39 chr13 13431504 13431634 -106852678 - RLTR10-int LTR ERVK -5987 1594 1462 4 687 7636 38 4 2 chr13 13431698 13432654 -106851658 - RLTR10-int LTR ERVK -989 998 41 4 687 2747 50 7 119 chr13 13432670 13433105 -106851207 - RLTR10 LTR ERVK -4 386 1 4 687 790 259 0 39 chr13 13433584 13433765 -106850547 + B3 SINE B2 30 203 -13 4 687 31 76 0 0 chr13 13433844 13433910 -106850402 + AT_rich Low_complexity Low_complexity 1 66 0 4 687 279 0 0 0 chr13 13433973 13434004 -106850308 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 4 687 273 318 0 0 chr13 13434010 13434076 -106850236 - tRNA-Ala-GCY_ tRNA tRNA -8 67 2 4 687 404 221 45 97 chr13 13434159 13434292 -106850020 + B4A SINE B4 99 224 -68 4 687 290 26 26 0 chr13 13434292 13434331 -106849981 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 4 687 404 221 45 97 chr13 13434331 13434352 -106849960 + B4A SINE B4 225 245 -47 4 687 600 164 0 0 chr13 13434354 13434464 -106849848 + GA-rich Low_complexity Low_complexity 4 113 0 4 687 234 308 68 102 chr13 13435083 13435289 -106849023 - MTEb LTR MaLR 0 379 181 4 687 1758 113 50 65 chr13 13436288 13436611 -106847701 - ORR1A3 LTR MaLR -8 318 1 4 687 1163 237 67 29 chr13 13436842 13437186 -106847126 + Lx2B LINE L1 6642 6998 -2 4 687 1424 90 0 0 chr13 13437194 13437383 -106846929 + B2_Mm2 SINE B2 2 190 -5 4 687 181 259 68 17 chr13 13437558 13437617 -106846695 - L3 LINE CR1 -3726 763 702 4 687 252 125 0 0 chr13 13437834 13437874 -106846438 - MTE2b LTR MaLR -5 374 335 4 687 251 232 18 0 chr13 13438260 13438316 -106845996 + T-rich Low_complexity Low_complexity 4 60 0 4 687 768 100 49 24 chr13 13438334 13438457 -106845855 - B1_Mus1 SINE Alu -22 126 1 4 687 262 238 121 38 chr13 13438457 13438509 -106845803 - ORR1B1-int LTR MaLR -860 649 585 4 687 7400 39 20 0 chr13 13438509 13439606 -106844706 - L1Md_F2 LINE L1 -34 6548 5430 4 687 231 151 24 48 chr13 13439794 13439961 -106844351 + (TG)n Simple_repeat Simple_repeat 1 163 0 4 687 336 242 22 0 chr13 13440062 13440153 -106844159 - B3A SINE B2 -39 159 67 4 687 432 259 8 51 chr13 13440510 13440628 -106843684 + PB1D10 SINE Alu 2 114 -3 4 687 405 0 0 0 chr13 13440757 13440802 -106843510 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 687 213 121 0 0 chr13 13440802 13440835 -106843477 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 4 687 1417 69 21 0 chr13 13441002 13441190 -106843122 + B2_Mm2 SINE B2 2 193 -2 4 687 652 200 28 21 chr13 13442225 13442368 -106841944 - B1_Mur4 SINE Alu -6 144 1 4 687 448 303 211 44 chr13 13445846 13446332 -106837980 - L1MC4a LINE L1 -128 5996 5444 4 687 3417 168 126 31 chr13 13446795 13447507 -106836805 + RLTR40 LTR ERVK 37 816 -1 4 687 694 246 107 21 chr13 13447638 13447825 -106836487 - ID_B1 SINE B4 -1 223 21 4 687 1154 62 0 40 chr13 13448002 13448154 -106836158 + B1_Mus2 SINE Alu 2 147 0 4 687 261 0 0 0 chr13 13448154 13448183 -106836129 + (A)n Simple_repeat Simple_repeat 1 29 0 4 687 294 29 0 0 chr13 13451012 13451047 -106833265 + (CTG)n Simple_repeat Simple_repeat 1 35 0 4 687 240 148 0 0 chr13 13451927 13451941 -106832371 + (A)n Simple_repeat Simple_repeat 1 14 0 4 687 1183 48 0 14 chr13 13451941 13452089 -106832223 + B1_Mus2 SINE Alu 2 147 0 4 687 240 148 0 0 chr13 13452089 13452128 -106832184 + (A)n Simple_repeat Simple_repeat 1 39 0 4 687 279 339 43 17 chr13 13452174 13452291 -106832021 + MIR SINE MIR 112 231 -31 4 687 329 262 398 7 chr13 13453809 13453954 -106830358 - ID_B1 SINE B4 -16 208 6 4 687 358 324 48 0 chr13 13454207 13454312 -106830000 + PB1D10 SINE Alu 1 110 -7 4 687 1286 72 71 16 chr13 13455023 13455207 -106829105 - B2_Mm2 SINE B2 0 195 2 4 687 839 235 91 10 chr13 13455230 13455428 -106828884 - ID_B1 SINE B4 -9 215 2 4 687 25 0 0 0 chr13 13456852 13456877 -106827435 + AT_rich Low_complexity Low_complexity 1 25 0 4 687 277 350 101 20 chr13 13457593 13457692 -106826620 - B4 SINE B4 -184 108 2 4 687 1192 121 5 55 chr13 13458102 13458304 -106826008 + B2_Mm1a SINE B2 1 192 -1 4 687 1076 99 0 34 chr13 13458522 13458668 -106825644 - B1_Mus1 SINE Alu -6 142 2 4 687 188 311 167 0 chr13 13459302 13459392 -106824920 + MIR SINE MIR 62 166 -96 4 687 420 212 107 33 chr13 13459452 13459574 -106824738 + B1F SINE Alu 11 141 -8 4 687 277 227 136 0 chr13 13459589 13459655 -106824657 + ID2 SINE ID 5 79 -4 4 687 308 275 201 33 chr13 13460528 13460633 -106823679 + MER2 DNA MER2_type 4 125 -220 4 687 2050 163 48 51 chr13 13460633 13461028 -106823284 + ORR1B1 LTR MaLR 1 394 0 4 687 308 275 201 33 chr13 13461028 13461106 -106823206 + MER2 DNA MER2_type 126 218 -127 4 687 495 0 0 0 chr13 13461691 13461746 -106822566 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 687 694 279 81 24 chr13 13461784 13461993 -106822319 + ID_B1 SINE B4 3 223 -1 4 687 807 195 128 16 chr13 13463135 13463346 -106820966 - ORR1C2 LTR MaLR -1 383 109 4 687 547 258 216 9 chr13 13463834 13464061 -106820251 + B4A SINE B4 1 274 -18 4 687 551 243 9 0 chr13 13464091 13464198 -106820114 + ID_B1 SINE B4 93 200 -24 4 687 561 270 33 33 chr13 13464933 13465086 -106819226 + B3A SINE B2 1 153 -45 4 687 390 115 0 0 chr13 13465097 13465158 -106819154 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 687 541 262 248 23 chr13 13465240 13465453 -106818859 - MER2 DNA MER2_type 0 345 98 4 687 728 263 39 0 chr13 13465453 13465609 -106818703 - RSINE1 SINE B4 -1 164 3 4 687 541 262 248 23 chr13 13465609 13465657 -106818655 - MER2 DNA MER2_type -248 97 27 4 687 384 309 87 0 chr13 13465857 13465983 -106818329 - B1F SINE Alu -11 138 2 4 687 319 217 50 0 chr13 13466232 13466292 -106818020 - ID SINE ID -153 71 9 4 687 221 263 52 13 chr13 13466904 13466981 -106817331 - L2c LINE L2 -69 3318 3239 4 687 255 31 0 0 chr13 13467639 13467671 -106816641 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 687 487 258 145 32 chr13 13467679 13467803 -106816509 - RSINE1 SINE B4 -25 140 3 4 687 308 242 69 29 chr13 13467814 13467916 -106816396 + MER103 DNA DNA 54 159 -7 4 687 1207 88 47 0 chr13 13468068 13468238 -106816074 + B2_Mm1t SINE B2 2 179 -14 5 687 416 242 98 43 chr13 13468238 13468402 -106815910 + B2_Mm2 SINE B2 2 174 -21 5 687 1194 57 0 0 chr13 13468402 13468542 -106815770 + B1_Mus2 SINE Alu 1 140 -7 5 687 452 0 0 87 chr13 13468545 13468614 -106815698 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 5 687 2224 123 20 8 chr13 13469029 13469382 -106814930 + RLTR15 LTR ERVK 3 359 0 5 687 510 31 0 0 chr13 13469780 13469844 -106814468 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 687 316 280 231 0 chr13 13470584 13470770 -106813542 + L1MB8 LINE L1 5941 6169 -9 5 687 207 0 0 0 chr13 13470773 13470796 -106813516 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 687 4992 186 44 45 chr13 13471178 13472245 -106812067 + Lx6 LINE L1 6218 7283 -177 5 687 420 250 26 18 chr13 13472345 13472459 -106811853 + Lx7 LINE L1 7206 7320 -376 5 687 1260 34 0 13 chr13 13472693 13472842 -106811470 + B1_Mus2 SINE Alu 1 147 0 5 687 1618 123 239 3 chr13 13472855 13473156 -106811156 + ORR1C2 LTR MaLR 13 384 0 5 687 921 114 8 8 chr13 13473377 13473510 -106810802 - B1_Mus1 SINE Alu -10 138 6 5 687 422 269 44 108 chr13 13473510 13473535 -106810777 - B4 SINE B4 -76 216 69 5 687 340 250 33 67 chr13 13473591 13473711 -106810601 - PB1D9 SINE Alu 0 120 5 5 687 1208 68 7 0 chr13 13473781 13473928 -106810384 + B1_Mus1 SINE Alu 1 148 0 5 687 245 289 53 0 chr13 13473943 13474019 -106810293 + PB1D7 SINE Alu 41 120 0 5 687 376 195 45 22 chr13 13474702 13474791 -106809521 + PB1 SINE Alu 30 120 -7 5 687 1182 76 0 0 chr13 13475161 13475306 -106809006 + B1_Mus2 SINE Alu 2 146 -1 5 687 378 0 0 0 chr13 13475474 13475516 -106808796 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 687 1028 248 22 70 chr13 13475559 13475832 -106808480 - B4A SINE B4 -31 261 2 5 687 1458 137 18 0 chr13 13475980 13476199 -106808113 - URR1B DNA MER1_type -2 223 1 5 687 262 326 84 16 chr13 13476397 13476581 -106807731 + MIR SINE MIR 23 214 -48 5 687 438 231 38 9 chr13 13477290 13477395 -106806917 + B1F1 SINE Alu 1 108 -41 5 687 180 0 0 0 chr13 13478122 13478142 -106806170 + (A)n Simple_repeat Simple_repeat 1 20 0 5 687 279 254 13 53 chr13 13478355 13478430 -106805882 - ID4 SINE ID -11 72 1 5 687 358 280 0 53 chr13 13478440 13478572 -106805740 - PB1 SINE Alu -2 125 1 5 687 343 257 62 27 chr13 13478698 13478810 -106805502 + B1_Mur4 SINE Alu 29 144 -6 5 687 232 266 49 25 chr13 13478824 13478905 -106805407 + ID4_ SINE ID 1 83 0 5 687 395 338 39 32 chr13 13479250 13479406 -106804906 + MER58C DNA MER1_type 1 157 -58 5 687 378 278 14 137 chr13 13480253 13480399 -106803913 + B1F SINE Alu 10 137 -12 5 687 420 55 0 0 chr13 13480399 13480454 -106803858 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 5 687 341 58 0 19 chr13 13480565 13480618 -106803694 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 687 381 75 0 0 chr13 13480742 13480795 -106803517 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 687 243 0 0 0 chr13 13482659 13482686 -106801626 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 687 290 290 64 18 chr13 13483068 13483079 -106801233 - B4A SINE B4 -92 200 87 5 687 494 255 0 0 chr13 13483079 13483177 -106801135 - PB1D7 SINE Alu -21 99 2 5 687 1128 95 0 0 chr13 13483209 13483356 -106800956 - B1_Mus2 SINE Alu 0 147 1 5 687 532 223 0 19 chr13 13484099 13484204 -106800108 - PB1D7 SINE Alu -16 104 2 5 687 591 301 14 10 chr13 13484206 13484375 -106799937 - ID_B1 SINE B4 -38 254 80 5 687 926 150 97 57 chr13 13486999 13487319 -106796993 + RMER6B LTR ERVK 69 461 0 5 687 362 189 200 0 chr13 13487864 13487954 -106796358 - B1_Mur2 SINE Alu -1 148 41 5 687 189 265 105 35 chr13 13488042 13488128 -106796184 + L2c LINE L2 3259 3350 -37 5 687 348 383 48 26 chr13 13488232 13488500 -106795812 - MLT1J LTR MaLR -194 318 45 5 687 438 274 30 60 chr13 13488480 13488647 -106795665 + MTEa LTR MaLR 218 379 0 5 687 311 331 11 28 chr13 13489133 13489310 -106795002 + (CACCAT)n Simple_repeat Simple_repeat 4 177 0 5 687 980 247 184 62 chr13 13489428 13489782 -106794530 + MTD LTR MaLR 1 397 -22 5 687 385 288 83 62 chr13 13489845 13490086 -106794226 - ORR1E LTR MaLR 0 359 114 5 687 1047 95 0 0 chr13 13490534 13490671 -106793641 + B1_Mus1 SINE Alu 2 138 -10 5 687 243 0 0 0 chr13 13490671 13490698 -106793614 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 687 225 360 82 38 chr13 13490898 13491057 -106793255 - MLT1K LTR MaLR -105 490 325 5 687 1152 75 7 0 chr13 13491120 13491266 -106793046 - B1_Mus1 SINE Alu -1 147 1 5 687 657 249 4 54 chr13 13491742 13491979 -106792333 + B4A SINE B4 1 213 -79 5 687 1316 27 0 0 chr13 13492098 13492245 -106792067 - B1_Mus2 SINE Alu 0 147 1 5 687 578 222 86 29 chr13 13492325 13492464 -106791848 - B1_Mur3 SINE Alu -2 147 1 5 687 754 291 91 39 chr13 13492483 13492790 -106791522 - ORR1E LTR MaLR -36 323 1 5 687 805 229 0 14 chr13 13493312 13493458 -106790854 + B1_Mur1 SINE Alu 6 149 0 5 687 1003 209 86 5 chr13 13493835 13494032 -106790280 - B3 SINE B2 -3 213 1 5 687 243 269 14 29 chr13 13494106 13494175 -106790137 + GA-rich Low_complexity Low_complexity 3 70 0 5 687 447 78 0 0 chr13 13494185 13494249 -106790063 + (TGAA)n Simple_repeat Simple_repeat 2 65 0 5 687 648 215 0 0 chr13 13494330 13494437 -106789875 - B1F SINE Alu -40 109 3 5 687 340 282 62 18 chr13 13494458 13494570 -106789742 - PB1D10 SINE Alu 0 117 1 5 687 848 233 103 14 chr13 13495113 13495326 -106788986 + 7SK RNA RNA 8 239 -92 5 687 597 292 0 0 chr13 13495570 13495707 -106788605 + ID_B1 SINE B4 81 217 -7 5 687 1993 151 19 0 chr13 13496506 13496818 -106787494 + ORR1A3 LTR MaLR 1 318 -8 5 687 263 254 18 0 chr13 13497143 13497198 -106787114 + B4A SINE B4 1 56 -236 5 687 507 17 0 0 chr13 13497199 13497259 -106787053 + (CA)n Simple_repeat Simple_repeat 1 60 0 5 687 302 241 77 44 chr13 13497399 13497490 -106786822 - PB1D10 SINE Alu 0 117 24 5 687 394 231 11 32 chr13 13497509 13497603 -106786709 - PB1D10 SINE Alu -2 115 24 5 687 335 233 102 23 chr13 13497530 13497618 -106786694 - ID_B1 SINE B4 -48 176 82 5 687 298 280 213 9 chr13 13498236 13498344 -106785968 - B4 SINE B4 -97 195 66 5 687 184 250 76 30 chr13 13498612 13498678 -106785634 - MIRc SINE MIR -143 125 57 5 687 317 24 0 23 chr13 13499044 13499087 -106785225 + (TATG)n Simple_repeat Simple_repeat 2 43 0 5 687 190 81 54 0 chr13 13499088 13499125 -106785187 + (TCCA)n Simple_repeat Simple_repeat 3 41 0 5 687 270 0 0 0 chr13 13499130 13499160 -106785152 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 687 1132 93 12 0 chr13 13499169 13499341 -106784971 + (TTCTC)n Simple_repeat Simple_repeat 1 174 0 5 687 226 242 24 16 chr13 13499349 13499475 -106784837 + CT-rich Low_complexity Low_complexity 5 131 0 5 687 635 184 9 17 chr13 13499506 13499622 -106784690 - PB1D9 SINE Alu -5 115 1 5 688 286 293 23 58 chr13 13500657 13500744 -106783568 + RSINE1 SINE B4 82 165 0 1 688 672 115 0 0 chr13 13500744 13500866 -106783446 + (GA)n Simple_repeat Simple_repeat 1 122 0 2 688 512 324 0 42 chr13 13501123 13501265 -106783047 + ID_B1 SINE B4 88 223 -1 3 688 285 235 0 0 chr13 13501280 13501348 -106782964 + ID_B1 SINE B4 100 167 -57 4 688 458 184 122 37 chr13 13501375 13501482 -106782830 + Lx8 LINE L1 7002 7117 -356 5 688 2444 175 62 18 chr13 13501515 13501749 -106782563 + RMER6C LTR ERVK 15 358 -332 6 688 315 0 0 0 chr13 13501749 13501784 -106782528 + (GGGTG)n Simple_repeat Simple_repeat 3 37 0 7 688 2444 161 66 29 chr13 13501784 13502121 -106782191 + RMER6C LTR ERVK 359 689 -1 6 688 202 118 0 29 chr13 13503076 13503111 -106781201 + MIR SINE MIR 98 131 -77 8 688 245 109 0 21 chr13 13503152 13503199 -106781113 + (TC)n Simple_repeat Simple_repeat 2 47 0 9 688 444 37 0 0 chr13 13503206 13503260 -106781052 + (TTCC)n Simple_repeat Simple_repeat 4 57 0 1 688 222 37 0 0 chr13 13503401 13503428 -106780884 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 688 1163 70 0 0 chr13 13503430 13503572 -106780740 - B1_Mus1 SINE Alu -6 142 1 1 688 402 259 81 35 chr13 13503577 13503735 -106780577 - ID_B1 SINE B4 0 224 60 1 688 240 111 0 0 chr13 13503841 13503877 -106780435 + (TCC)n Simple_repeat Simple_repeat 2 37 0 1 688 3705 151 74 5 chr13 13503923 13504555 -106779757 - RLTR33 LTR ERVK -2 676 1 1 688 4688 43 5 61 chr13 13505076 13505180 -106779132 + LTRIS_Mus LTR ERV1 1 102 -485 1 688 1299 27 0 0 chr13 13505180 13505327 -106778985 + B1_Mm SINE Alu 1 147 0 1 688 4688 43 5 61 chr13 13505327 13505844 -106778468 + LTRIS_Mus LTR ERV1 103 587 0 1 688 726 216 0 22 chr13 13505988 13506125 -106778187 + B1_Mur4 SINE Alu 17 150 0 1 688 399 321 22 22 chr13 13506144 13506281 -106778031 - RMER15 LTR ERVL -47 528 392 1 688 335 325 31 31 chr13 13506384 13506514 -106777798 - Lx8 LINE L1 -310 7163 7034 2 688 265 281 160 23 chr13 13506707 13506838 -106777474 - MER63B DNA AcHobo 0 436 288 2 688 1114 80 102 6 chr13 13507250 13507426 -106776886 - B2_Mm1a SINE B2 0 193 1 2 688 661 24 0 0 chr13 13507426 13507473 -106776839 - B1_Mus2 SINE Alu -100 47 1 2 688 427 239 26 35 chr13 13508038 13508151 -106776161 + B1F SINE Alu 28 139 -10 2 688 615 27 0 0 chr13 13508157 13508230 -106776082 + (TAAA)n Simple_repeat Simple_repeat 3 75 0 2 688 788 294 35 14 chr13 13508233 13508519 -106775793 + B4 SINE B4 1 292 0 2 688 259 305 0 109 chr13 13508638 13508730 -106775582 - ID4_ SINE ID 0 83 2 2 688 1102 54 158 23 chr13 13508798 13508969 -106775343 + B2_Mm2 SINE B2 1 194 -1 2 688 323 351 37 0 chr13 13508984 13509118 -106775194 + Tigger5 DNA MER2_type 1 139 -2267 2 688 416 302 8 45 chr13 13509154 13509286 -106775026 + Tigger5 DNA MER2_type 2280 2406 0 2 688 1010 85 35 7 chr13 13509489 13509619 -106774693 + B1_Mus2 SINE Alu 2 136 -11 3 688 206 32 0 31 chr13 13509619 13509651 -106774661 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 3 688 1010 85 35 7 chr13 13509651 13509662 -106774650 + B1_Mus2 SINE Alu 137 147 0 3 688 1352 92 11 0 chr13 13509672 13509857 -106774455 + B2_Mm1t SINE B2 1 187 -6 3 688 2652 7 0 0 chr13 13509995 13510287 -106774025 + L1Md_T LINE L1 6291 6582 0 3 688 236 196 17 35 chr13 13510472 13510530 -106773782 + RMER15 LTR ERVL 1 57 -518 3 688 456 106 310 26 chr13 13511549 13511665 -106772647 - B2_Mm2 SINE B2 0 195 47 3 688 1241 119 11 0 chr13 13511731 13511908 -106772404 - B2_Mm1t SINE B2 -14 179 1 3 688 1185 133 209 4 chr13 13511917 13512151 -106772161 + RMER15 LTR ERVL 52 333 -242 3 688 2244 128 145 28 chr13 13512157 13512557 -106771755 - RLTR44B LTR ERVK 0 449 3 3 688 5185 45 0 0 chr13 13512559 13513158 -106771154 - RLTR44-int LTR ERVK 0 2812 2214 3 688 5067 60 8 8 chr13 13513419 13514045 -106770267 - RLTR44-int LTR ERVK -1324 1488 863 3 688 478 159 159 0 chr13 13514039 13514127 -106770185 - RLTR44-int LTR ERVK -2710 102 1 3 688 1978 149 91 42 chr13 13514127 13514513 -106769799 - RLTR44B LTR ERVK 0 405 1 3 688 1171 142 69 56 chr13 13514514 13514606 -106769706 + RMER15 LTR ERVL 341 428 -147 3 688 1690 148 166 6 chr13 13514606 13514932 -106769380 + ORR1C1 LTR MaLR 1 378 0 3 688 1171 142 69 56 chr13 13514932 13515071 -106769241 + RMER15 LTR ERVL 429 575 0 3 688 216 286 0 0 chr13 13515308 13515364 -106768948 + B1F SINE Alu 74 129 -20 3 688 329 305 28 28 chr13 13515357 13515465 -106768847 + B4A SINE B4 49 156 -136 4 688 1983 280 57 27 chr13 13515569 13516311 -106768001 + L1ME1 LINE L1 5416 6179 0 4 688 253 217 16 16 chr13 13516356 13516417 -106767895 + tRNA-Ala-GCY_ tRNA tRNA 6 66 -9 4 688 313 333 8 16 chr13 13516418 13516540 -106767772 + GA-rich Low_complexity Low_complexity 2 122 0 4 688 809 109 2 1 chr13 13516863 13516988 -106767324 + B1_Mus1 SINE Alu 24 148 0 4 688 288 130 0 0 chr13 13516988 13517034 -106767278 + (A)n Simple_repeat Simple_repeat 1 46 0 4 688 258 238 286 0 chr13 13517085 13517098 -106767214 + B4A SINE B4 85 97 -195 4 688 369 62 0 0 chr13 13517098 13517146 -106767166 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 688 258 238 286 0 chr13 13517146 13517237 -106767075 + B4A SINE B4 98 218 -74 4 688 444 215 53 21 chr13 13517150 13517245 -106767067 + PB1D7 SINE Alu 21 118 -2 4 688 1065 190 19 23 chr13 13517263 13517478 -106766834 + B3 SINE B2 3 216 0 4 688 309 282 0 0 chr13 13517528 13517599 -106766713 + B4A SINE B4 1 71 -221 5 688 900 275 78 48 chr13 13517548 13517874 -106766438 + MTE2a LTR MaLR 49 374 -5 5 688 1225 48 0 0 chr13 13517875 13518022 -106766290 + B1_Mus2 SINE Alu 1 147 0 5 688 225 0 0 0 chr13 13518022 13518047 -106766265 + (A)n Simple_repeat Simple_repeat 1 25 0 5 688 382 287 50 89 chr13 13518121 13518301 -106766011 + MTEa LTR MaLR 206 378 -1 5 688 283 304 13 3 chr13 13518754 13518841 -106765471 - B1F2 SINE Alu -34 86 1 5 688 269 274 0 40 chr13 13518780 13518856 -106765456 - ID_B1 SINE B4 -82 142 70 5 688 291 286 56 19 chr13 13518905 13519012 -106765300 - PB1D9 SINE Alu 0 120 10 5 688 1056 51 36 0 chr13 13519018 13519156 -106765156 - B1_Mm SINE Alu 0 147 5 5 688 253 331 57 101 chr13 13519165 13519211 -106765101 + B4A SINE B4 55 180 -112 5 688 449 240 57 9 chr13 13519211 13519316 -106764996 + PB1D7 SINE Alu 2 111 -9 5 688 684 78 0 42 chr13 13519329 13519449 -106764863 + (GGAA)n Simple_repeat Simple_repeat 4 118 0 6 688 186 43 0 0 chr13 13520176 13520199 -106764113 + (G)n Simple_repeat Simple_repeat 1 23 0 6 688 522 222 19 0 chr13 13520202 13520222 -106764090 + PB1D9 SINE Alu 4 23 -97 6 688 513 0 0 0 chr13 13520222 13520279 -106764033 + (TTTTG)n Simple_repeat Simple_repeat 1 57 0 6 688 522 222 19 0 chr13 13520279 13520366 -106763946 + PB1D9 SINE Alu 24 111 -9 6 688 745 173 13 0 chr13 13520370 13520526 -106763786 + GA-rich Low_complexity Low_complexity 2 159 0 6 688 464 213 270 51 chr13 13520530 13520708 -106763604 + ID_B1 SINE B4 1 217 -7 6 688 344 207 17 0 chr13 13520717 13520775 -106763537 + B1_Mur4 SINE Alu 2 60 -90 6 688 256 204 0 0 chr13 13520780 13520829 -106763483 - MER63D DNA AcHobo -31 1030 982 6 688 501 258 0 0 chr13 13521856 13521949 -106762363 + B1F2 SINE Alu 5 97 -52 6 688 254 29 0 28 chr13 13522160 13522196 -106762116 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 6 688 851 182 121 23 chr13 13522233 13522407 -106761905 - MTD LTR MaLR -115 304 114 7 688 440 187 103 86 chr13 13522419 13522536 -106761776 + PB1D7 SINE Alu 2 120 0 7 688 652 219 40 14 chr13 13522493 13522641 -106761671 - MTD LTR MaLR -261 158 7 7 688 1505 57 0 25 chr13 13523052 13523249 -106761063 + B2_Mm2 SINE B2 1 192 -3 7 688 228 300 24 24 chr13 13524573 13524618 -106759694 + RMER15 LTR ERVL 341 385 -190 7 688 2121 184 34 10 chr13 13524618 13525029 -106759283 - MTC LTR MaLR 0 421 1 7 688 228 300 24 24 chr13 13525029 13525065 -106759247 + RMER15 LTR ERVL 386 421 -154 7 688 563 250 43 0 chr13 13525083 13525199 -106759113 - B3A SINE B2 -77 121 1 7 688 251 265 0 0 chr13 13525199 13525247 -106759065 - B4 SINE B4 -65 227 180 7 688 267 305 208 17 chr13 13525206 13525326 -106758986 - B1F2 SINE Alu -6 143 1 7 688 535 206 36 14 chr13 13525532 13525665 -106758647 + B1F1 SINE Alu 9 141 -8 7 688 837 52 0 56 chr13 13525702 13525864 -106758448 + (TG)n Simple_repeat Simple_repeat 2 154 0 7 688 550 318 25 36 chr13 13525922 13526199 -106758113 - B4A SINE B4 -18 274 1 8 688 537 265 34 8 chr13 13526208 13526326 -106757986 - ID_B1 SINE B4 -7 217 97 8 688 626 237 0 8 chr13 13526477 13526596 -106757716 - ID_B1 SINE B4 -28 196 79 8 688 221 328 60 0 chr13 13526943 13527010 -106757302 + MIRb SINE MIR 36 106 -162 8 688 598 190 17 25 chr13 13528032 13528151 -106756161 + PB1D7 SINE Alu 1 118 -2 8 688 260 186 23 0 chr13 13528161 13528204 -106756108 + ID SINE ID 27 70 -154 8 688 459 0 0 0 chr13 13528207 13528258 -106756054 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 688 243 250 0 18 chr13 13528271 13528328 -106755984 + B4A SINE B4 2 57 -235 8 688 1104 83 7 0 chr13 13528927 13529072 -106755240 + B1_Mus2 SINE Alu 2 147 0 8 688 263 281 63 126 chr13 13531070 13531261 -106753051 - Charlie4a DNA MER1_type -1 507 329 8 688 307 284 14 0 chr13 13531331 13531405 -106752907 - ID SINE ID -149 75 1 9 688 314 279 48 0 chr13 13531549 13531653 -106752659 + B1_Mus1 SINE Alu 5 113 -35 9 688 520 224 0 87 chr13 13531658 13531785 -106752527 + RSINE1 SINE B4 5 120 -45 9 688 292 313 25 34 chr13 13532030 13532149 -106752163 + PB1D7 SINE Alu 3 120 0 9 688 500 178 254 45 chr13 13532308 13532485 -106751827 - B3 SINE B2 -1 215 2 9 688 186 103 0 0 chr13 13532508 13532537 -106751775 + (ATG)n Simple_repeat Simple_repeat 1 29 0 9 688 291 317 128 90 chr13 13532549 13532705 -106751607 - RSINE1 SINE B4 -2 163 2 9 688 264 319 92 43 chr13 13532707 13532848 -106751464 + Charlie1b DNA MER1_type 106 253 -270 9 688 1219 70 85 28 chr13 13532897 13533074 -106751238 - B2_Mm2 SINE B2 -7 188 2 9 688 1001 256 4 23 chr13 13533889 13534149 -106750163 + B4A SINE B4 26 280 -12 9 688 4635 53 3 3 chr13 13534572 13535144 -106749168 - L1_Mus3 LINE L1 0 6638 6067 1 688 299 214 235 39 chr13 13535267 13535369 -106748943 + B1F1 SINE Alu 7 128 -21 1 688 824 278 27 23 chr13 13535446 13535667 -106748645 - ID_B1 SINE B4 -2 222 1 1 688 297 0 0 0 chr13 13535670 13535703 -106748609 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 688 430 289 79 85 chr13 13535763 13535780 -106748532 - B4A SINE B4 -44 248 197 1 688 870 144 30 0 chr13 13535780 13535912 -106748400 - B1_Mur2 SINE Alu 0 149 14 1 688 430 289 79 85 chr13 13535912 13535952 -106748360 - B4A SINE B4 -44 196 61 1 688 26 30 0 0 chr13 13536491 13536524 -106747788 + AT_rich Low_complexity Low_complexity 1 33 0 1 688 415 295 32 39 chr13 13536554 13536709 -106747603 - RSINE1 SINE B4 0 165 12 1 688 489 271 146 30 chr13 13536843 13537164 -106747148 - RMER15 LTR ERVL -21 554 74 1 688 342 0 0 0 chr13 13537452 13537490 -106746822 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 688 758 226 93 4 chr13 13537997 13538210 -106746102 - B4A SINE B4 -66 226 1 1 688 215 244 0 0 chr13 13538369 13538410 -106745902 - ID2 SINE ID -1 82 42 1 688 590 250 0 16 chr13 13538481 13538603 -106745709 + PB1D9 SINE Alu 1 120 0 1 688 2985 128 37 48 chr13 13538663 13539182 -106745130 + RLTR28 LTR ERVL 1 513 -11 1 688 495 0 0 0 chr13 13539663 13539718 -106744594 + (TCCC)n Simple_repeat Simple_repeat 1 55 0 1 688 198 0 0 0 chr13 13539885 13539907 -106744405 + (TCC)n Simple_repeat Simple_repeat 3 24 0 1 688 298 195 26 0 chr13 13539905 13539982 -106744330 + CT-rich Low_complexity Low_complexity 1 79 0 1 688 478 105 19 95 chr13 13540348 13540453 -106743859 + PB1D9 SINE Alu 22 118 -2 1 688 396 111 0 0 chr13 13540468 13540540 -106743772 + (GA)n Simple_repeat Simple_repeat 2 73 0 1 688 239 268 143 14 chr13 13540729 13540859 -106743453 - RSINE1 SINE B4 -18 274 84 1 688 6550 73 12 4 chr13 13540866 13541820 -106742492 - L1_Mus3 LINE L1 -1 6653 5783 1 688 1177 63 0 0 chr13 13541820 13541963 -106742349 - B1_Mus1 SINE Alu -1 147 5 1 688 6250 136 25 48 chr13 13541963 13542151 -106742161 - L1_Mus3 LINE L1 -872 5782 5612 1 688 385 280 35 83 chr13 13542160 13542304 -106742008 - B4A SINE B4 -151 141 5 1 688 207 100 0 0 chr13 13542367 13542397 -106741915 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 688 560 255 135 37 chr13 13542404 13542567 -106741745 - B3A SINE B2 -17 181 3 1 688 662 197 21 14 chr13 13543008 13543152 -106741160 + B1_Mur3 SINE Alu 5 149 0 1 688 191 140 20 0 chr13 13543152 13543202 -106741110 + A-rich Low_complexity Low_complexity 4 54 0 1 688 322 286 128 7 chr13 13543292 13543433 -106740879 - L1MC5 LINE L1 -469 7492 7335 1 688 317 282 0 0 chr13 13543489 13543567 -106740745 + ID4_ SINE ID 5 82 -1 1 688 647 257 16 74 chr13 13543659 13543848 -106740464 - B4A SINE B4 -113 179 2 1 688 613 248 0 0 chr13 13543910 13544027 -106740285 - B1F SINE Alu 0 149 33 1 688 23 54 0 0 chr13 13544049 13544086 -106740226 + AT_rich Low_complexity Low_complexity 1 37 0 1 688 380 90 0 54 chr13 13544090 13544156 -106740156 - B2_Mm2 SINE B2 -107 109 48 1 688 1147 121 35 0 chr13 13544182 13544355 -106739957 - B2_Mm1t SINE B2 -14 179 1 1 688 573 229 0 9 chr13 13544426 13544536 -106739776 - ID_B1 SINE B4 -8 216 108 1 688 585 246 115 0 chr13 13544594 13544724 -106739588 + RSINE1 SINE B4 3 147 -18 1 688 325 267 75 19 chr13 13544761 13544868 -106739444 + PB1D7 SINE Alu 6 118 -2 1 688 444 307 152 0 chr13 13544879 13545123 -106739189 - L1MB7 LINE L1 -67 6117 5837 1 688 1736 190 117 14 chr13 13545164 13545522 -106738790 + MTD LTR MaLR 25 419 0 1 688 469 263 8 63 chr13 13545558 13545684 -106738628 - ID_B1 SINE B4 -7 217 99 1 688 1130 209 5 0 chr13 13546148 13546354 -106737958 - B3 SINE B2 -5 211 5 1 688 424 271 8 8 chr13 13546412 13546542 -106737770 - B1F1 SINE Alu -18 131 2 1 688 369 0 0 0 chr13 13548608 13548649 -106735663 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 688 227 275 145 32 chr13 13549639 13549763 -106734549 - B4 SINE B4 -30 262 125 1 688 932 215 45 5 chr13 13549818 13550019 -106734293 - ID_B1 SINE B4 -11 213 5 1 688 819 261 29 18 chr13 13550275 13550552 -106733760 - L1M3 LINE L1 -1004 5136 4857 1 688 933 128 6 92 chr13 13551053 13551217 -106733095 - B1_Mur4 SINE Alu 0 150 1 1 688 504 267 114 0 chr13 13551251 13551382 -106732930 + B1_Mur1 SINE Alu 1 146 -3 1 688 729 264 29 6 chr13 13551419 13551594 -106732718 - B3A SINE B2 -18 180 2 1 688 329 131 247 12 chr13 13551608 13551693 -106732619 - U6 snRNA snRNA -1 106 2 1 688 45 62 0 0 chr13 13551725 13551805 -106732507 + AT_rich Low_complexity Low_complexity 1 80 0 1 688 554 250 12 55 chr13 13551812 13551977 -106732335 - RSINE1 SINE B4 -5 160 3 1 688 273 264 130 43 chr13 13552049 13552311 -106732001 - L1MC5 LINE L1 -178 7783 7662 1 688 248 211 0 0 chr13 13552363 13552415 -106731897 + C-rich Low_complexity Low_complexity 1 52 0 1 688 589 175 10 0 chr13 13552416 13552513 -106731799 - B1_Mur2 SINE Alu -15 134 37 1 688 264 264 13 53 chr13 13552446 13552522 -106731790 - MT2B LTR ERVL -344 257 185 1 688 207 0 0 0 chr13 13552529 13552552 -106731760 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 688 306 254 165 9 chr13 13552643 13552758 -106731554 - ID_B1 SINE B4 -29 195 63 1 688 521 211 28 0 chr13 13553221 13553330 -106730982 + ID_B1 SINE B4 78 189 -35 1 688 280 212 127 100 chr13 13553235 13553345 -106730967 + PB1 SINE Alu 13 125 -2 1 688 722 253 7 7 chr13 13554161 13554312 -106730000 + ID_B1 SINE B4 7 157 -67 1 688 374 38 0 19 chr13 13554373 13554426 -106729886 + (TTAA)n Simple_repeat Simple_repeat 1 52 0 1 688 249 0 73 0 chr13 13554466 13554507 -106729805 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 688 246 308 142 53 chr13 13554690 13554803 -106729509 - B1_Mm SINE Alu -24 123 1 1 688 617 262 116 0 chr13 13554803 13554873 -106729439 - ID_B1 SINE B4 -128 96 8 1 688 302 375 90 6 chr13 13554883 13555060 -106729252 + MIR SINE MIR 29 220 -42 1 688 504 315 76 149 chr13 13555570 13555898 -106728414 - ORR1E LTR MaLR 0 359 56 1 688 1224 91 11 11 chr13 13556977 13557155 -106727157 - B2_Mm1t SINE B2 -14 179 2 1 688 841 207 89 25 chr13 13558010 13558213 -106726099 - B3 SINE B2 0 216 1 1 688 235 302 86 86 chr13 13558448 13558600 -106725712 + YREP_Mm Unknown Unknown 145 296 -1516 1 688 673 225 0 60 chr13 13558468 13558619 -106725693 - ID_B1 SINE B4 0 224 83 1 688 321 253 11 67 chr13 13558698 13558787 -106725525 + B3A SINE B2 99 182 -16 1 688 590 219 13 0 chr13 13558790 13558945 -106725367 + (CATA)n Simple_repeat Simple_repeat 4 160 0 1 688 643 281 37 0 chr13 13559031 13559195 -106725117 + B4 SINE B4 50 219 -73 1 688 3189 40 0 0 chr13 13559203 13559579 -106724733 + L1Md_F3 LINE L1 6195 6570 -14 1 688 21 36 0 0 chr13 13559812 13559840 -106724472 + AT_rich Low_complexity Low_complexity 1 28 0 1 688 284 48 24 0 chr13 13559860 13559902 -106724410 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 1 688 888 169 7 20 chr13 13559919 13560070 -106724242 + B1_Mur3 SINE Alu 1 149 0 1 688 456 248 116 27 chr13 13561164 13561276 -106723036 + RSINE1 SINE B4 1 122 -43 1 688 303 122 0 0 chr13 13561276 13561325 -106722987 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 1 688 489 257 26 9 chr13 13561329 13561443 -106722869 - B1_Mur1 SINE Alu -1 148 33 1 688 994 107 7 0 chr13 13561490 13561630 -106722682 + B1_Mur4 SINE Alu 2 142 -8 1 688 376 177 114 0 chr13 13561665 13561744 -106722568 + PB1D10 SINE Alu 23 110 -7 1 688 411 21 0 0 chr13 13561959 13562007 -106722305 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 688 442 191 35 3 chr13 13562051 13562156 -106722156 - B1_Mus2 SINE Alu -2 115 7 1 688 870 19 0 0 chr13 13562282 13562386 -106721926 + (GA)n Simple_repeat Simple_repeat 2 105 0 1 688 783 261 63 149 chr13 13562393 13562754 -106721558 + MTE2a LTR MaLR 5 336 -43 1 688 849 151 20 0 chr13 13562754 13562900 -106721412 - B1_Mur4 SINE Alu 0 150 2 1 688 783 261 63 149 chr13 13562900 13562948 -106721364 + MTE2a LTR MaLR 337 379 0 1 688 1195 162 54 0 chr13 13562977 13563181 -106721131 - B3 SINE B2 -1 215 1 1 688 26 0 0 0 chr13 13564303 13564329 -106719983 + AT_rich Low_complexity Low_complexity 1 26 0 1 688 1524 63 5 0 chr13 13564329 13564519 -106719793 - B2_Mm1t SINE B2 -2 191 1 1 688 599 96 23 31 chr13 13564529 13564658 -106719654 - Lx9 LINE L1 0 7644 7517 1 688 261 0 0 0 chr13 13564675 13564704 -106719608 + (TGG)n Simple_repeat Simple_repeat 1 29 0 1 688 207 0 0 0 chr13 13564704 13564727 -106719585 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 688 310 309 45 18 chr13 13565427 13565539 -106718773 - PB1D10 SINE Alu -2 115 1 1 688 257 297 14 0 chr13 13565572 13565646 -106718666 + CT-rich Low_complexity Low_complexity 2 76 0 1 688 591 53 0 0 chr13 13566408 13566483 -106717829 + (TCCC)n Simple_repeat Simple_repeat 2 76 0 1 688 280 312 0 0 chr13 13566495 13566572 -106717740 - B4 SINE B4 -215 77 1 1 688 2492 40 47 3 chr13 13566586 13566908 -106717404 - L1Md_F3 LINE L1 0 6584 6249 1 688 427 179 207 35 chr13 13567104 13567220 -106717092 + B1F SINE Alu 11 146 -3 1 688 227 290 42 83 chr13 13567615 13567807 -106716505 - RLTR40 LTR ERVK -64 753 570 1 688 222 194 0 0 chr13 13567807 13567869 -106716443 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 688 870 260 50 23 chr13 13567871 13568091 -106716221 - B4A SINE B4 0 292 67 2 688 587 319 12 24 chr13 13568927 13569097 -106715215 + B4 SINE B4 1 168 -124 2 688 2381 143 33 54 chr13 13569564 13569991 -106714321 - MTC LTR MaLR -1 420 3 2 688 1028 239 18 35 chr13 13570899 13571125 -106713187 + ID_B1 SINE B4 2 223 -1 2 688 633 142 0 0 chr13 13571407 13571520 -106712792 + (CA)n Simple_repeat Simple_repeat 1 113 0 2 688 413 248 28 5 chr13 13571617 13571739 -106712573 - PB1D7 SINE Alu -22 125 1 2 688 198 0 0 0 chr13 13571991 13572013 -106712299 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 688 395 232 0 24 chr13 13572093 13572177 -106712135 - ID4 SINE ID -1 82 1 2 688 30 45 0 0 chr13 13572179 13572223 -106712089 + AT_rich Low_complexity Low_complexity 1 44 0 2 688 1922 176 39 37 chr13 13572227 13572664 -106711648 - RMER10A LTR ERVL 0 442 5 2 688 556 234 27 33 chr13 13572664 13572676 -106711636 - B1F SINE Alu 0 149 138 2 688 3569 68 15 4 chr13 13572676 13573135 -106711177 - L1Md_F2 LINE L1 0 6582 6119 2 688 556 234 27 33 chr13 13573135 13573272 -106711040 - B1F SINE Alu -12 137 1 2 688 446 253 11 83 chr13 13573272 13573300 -106711012 - ID_B1 SINE B4 -12 212 57 2 688 207 0 0 0 chr13 13574249 13574272 -106710040 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 2 688 26 30 0 0 chr13 13574877 13574910 -106709402 + AT_rich Low_complexity Low_complexity 1 33 0 2 688 1293 273 55 22 chr13 13574924 13575418 -106708894 - L1MA5 LINE L1 -5 6295 5786 2 688 1240 256 79 32 chr13 13575422 13575765 -106708547 - ORR1D2 LTR MaLR -2 368 10 2 688 429 235 70 9 chr13 13576328 13576443 -106707869 - PB1D9 SINE Alu 0 120 1 2 688 296 228 0 0 chr13 13576445 13576502 -106707810 - L1MB3 LINE L1 -43 6140 6084 2 688 394 303 40 75 chr13 13577292 13577492 -106706820 + B4A SINE B4 24 216 -76 2 688 335 183 0 101 chr13 13577491 13577570 -106706742 + RSINE1 SINE B4 95 165 0 2 688 305 193 214 12 chr13 13577627 13577711 -106706601 + PB1D10 SINE Alu 12 112 -5 2 688 29 0 0 0 chr13 13577711 13577740 -106706572 + AT_rich Low_complexity Low_complexity 1 29 0 2 688 306 0 0 0 chr13 13578470 13578504 -106705808 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 688 210 121 30 0 chr13 13578610 13578643 -106705669 - B3A SINE B2 -127 71 38 2 688 216 0 0 0 chr13 13579675 13579699 -106704613 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 688 1178 43 0 0 chr13 13579699 13579837 -106704475 - B1_Mus1 SINE Alu -10 138 1 2 688 721 284 36 23 chr13 13579841 13580061 -106704251 - ID_B1 SINE B4 0 224 2 2 688 281 240 109 55 chr13 13580936 13581040 -106703272 + ID_B1 SINE B4 81 190 -34 2 688 224 211 123 0 chr13 13581040 13581097 -106703215 + ID SINE ID 2 65 -159 2 688 776 297 89 52 chr13 13582706 13582760 -106701552 - MLT2B4 LTR ERVL -2 554 491 2 688 291 71 0 0 chr13 13582760 13582802 -106701510 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 688 776 297 89 52 chr13 13582802 13582821 -106701491 - MLT2B4 LTR ERVL -66 490 474 2 688 1377 71 49 0 chr13 13582821 13583005 -106701307 + B2_Mm2 SINE B2 1 193 -2 2 688 776 297 89 52 chr13 13583005 13583257 -106701055 - MLT2B4 LTR ERVL -83 473 217 2 688 562 103 0 33 chr13 13583259 13583379 -106700933 + (TCTCTG)n Simple_repeat Simple_repeat 5 120 0 2 688 729 179 41 0 chr13 13583394 13583517 -106700795 - B1_Mur2 SINE Alu -19 130 3 2 688 285 283 301 17 chr13 13583519 13583695 -106700617 - MLT2B4 LTR ERVL -323 233 8 2 688 314 282 41 142 chr13 13584003 13584222 -106700090 - MTEa LTR MaLR 0 379 183 2 688 497 246 73 22 chr13 13584206 13584343 -106699969 + RSINE1 SINE B4 8 151 -14 2 688 306 0 0 0 chr13 13584346 13584380 -106699932 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 688 332 251 165 42 chr13 13584793 13584887 -106699425 + L1ME3B LINE L1 5638 5751 -489 2 688 2831 55 105 0 chr13 13584887 13585249 -106699063 - MTB LTR MaLR 0 400 1 2 688 332 251 165 42 chr13 13585249 13585366 -106698946 + L1ME3B LINE L1 5752 5875 -365 2 688 243 0 0 0 chr13 13585386 13585413 -106698899 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 688 438 233 0 9 chr13 13585458 13585553 -106698759 + ID4_ SINE ID 7 98 -54 2 688 1220 43 25 0 chr13 13585647 13585810 -106698502 - L1Md_F2 LINE L1 -3 6579 6413 2 688 1158 106 0 0 chr13 13586689 13586935 -106697377 + (TTC)n Simple_repeat Simple_repeat 1 246 0 2 688 1120 79 0 0 chr13 13586946 13587086 -106697226 - B1_Mus1 SINE Alu -8 140 1 2 688 373 326 118 0 chr13 13587747 13587882 -106696430 + B4 SINE B4 1 151 -141 2 688 1201 256 133 12 chr13 13588169 13588493 -106695819 - MTEb LTR MaLR -13 366 4 2 688 226 364 26 60 chr13 13588566 13588683 -106695629 + MIRc SINE MIR 22 134 -134 2 688 766 241 16 45 chr13 13588727 13588959 -106695353 + B3A SINE B2 1 214 -2 2 688 253 279 23 23 chr13 13589392 13589480 -106694832 - MLT1A1 LTR MaLR -20 388 301 2 688 655 165 23 45 chr13 13589613 13589746 -106694566 - B1_Mur3 SINE Alu -19 130 1 2 688 233 330 133 9 chr13 13589746 13589859 -106694453 + MER58A DNA MER1_type 54 180 -44 2 688 190 243 0 0 chr13 13590058 13590095 -106694217 - L3b LINE CR1 -268 214 178 2 688 303 294 32 41 chr13 13590538 13590656 -106693656 - PB1D10 SINE Alu -2 118 1 2 688 711 292 52 49 chr13 13591022 13591350 -106692962 + L1MB5 LINE L1 5840 6168 -6 2 688 434 263 8 33 chr13 13591405 13591527 -106692785 - PB1D9 SINE Alu 0 120 2 2 688 339 195 758 15 chr13 13591557 13591685 -106692627 - ID_B1 SINE B4 0 224 2 2 688 399 147 59 20 chr13 13592959 13593112 -106691200 + (TATAA)n Simple_repeat Simple_repeat 5 163 0 2 688 259 190 24 72 chr13 13593143 13593268 -106691044 + (TATAA)n Simple_repeat Simple_repeat 5 123 0 2 688 397 308 99 8 chr13 13593376 13593507 -106690805 - B1F SINE Alu 0 149 7 2 688 202 217 0 42 chr13 13593570 13593606 -106690706 + A-rich Low_complexity Low_complexity 2 37 0 2 688 587 185 101 0 chr13 13593606 13593725 -106690587 + B1_Mur1 SINE Alu 1 131 -18 2 688 202 217 0 42 chr13 13593725 13593760 -106690552 + A-rich Low_complexity Low_complexity 38 70 0 2 688 240 354 8 16 chr13 13593815 13593944 -106690368 - L1M5 LINE L1 -1585 4561 4434 2 688 607 253 36 36 chr13 13593946 13594139 -106690173 + B3A SINE B2 2 194 -4 2 688 472 315 139 16 chr13 13595262 13595449 -106688863 - ID_B1 SINE B4 -2 222 13 2 688 246 143 0 0 chr13 13595420 13595455 -106688857 - tRNA-Phe-TTY tRNA tRNA -41 35 1 2 688 335 259 157 0 chr13 13595859 13595967 -106688345 + PB1 SINE Alu 1 125 -2 2 688 426 190 47 12 chr13 13595976 13596061 -106688251 + BC1_Mm scRNA scRNA 2 89 -63 2 688 519 17 0 0 chr13 13597013 13597073 -106687239 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 688 985 267 19 41 chr13 13597312 13597578 -106686734 - B4A SINE B4 -32 260 1 2 688 210 173 0 55 chr13 13598774 13598829 -106685483 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 2 688 691 243 113 22 chr13 13599427 13599618 -106684694 - B4 SINE B4 0 292 88 2 688 234 0 0 0 chr13 13599618 13599644 -106684668 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 2 688 691 243 113 22 chr13 13599644 13599683 -106684629 - B4 SINE B4 -205 87 41 2 688 243 313 0 0 chr13 13600102 13600169 -106684143 + Cheshire DNA MER1_type 30 96 -2324 2 688 407 248 114 0 chr13 13601940 13602045 -106682267 - MTE2b LTR MaLR -262 117 1 2 688 654 266 9 112 chr13 13602502 13602545 -106681767 + ID SINE ID 14 52 -172 2 688 198 0 0 0 chr13 13602545 13602567 -106681745 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 688 654 266 9 112 chr13 13602567 13602756 -106681556 + ID_B1 SINE B4 53 222 -2 2 688 217 82 98 0 chr13 13603737 13603798 -106680514 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 2 688 412 268 5 86 chr13 13604519 13604664 -106679648 - PB1D10 SINE Alu -9 140 10 2 688 709 281 13 35 chr13 13604832 13605061 -106679251 - ID_B1 SINE B4 0 224 1 2 688 919 259 75 36 chr13 13605841 13606173 -106678139 - Lx8 LINE L1 -5 7468 7124 2 688 449 286 84 25 chr13 13606183 13606297 -106678015 + L1MB4 LINE L1 5148 5270 -876 2 688 4456 51 65 12 chr13 13606297 13606894 -106677418 - Lx3_Mus LINE L1 0 7009 6381 2 688 1724 286 96 36 chr13 13606894 13607016 -106677296 + L1MB4 LINE L1 5271 5398 -782 2 688 360 202 13 0 chr13 13607016 13607095 -106677217 + ID4 SINE ID 3 82 -1 2 688 1724 286 96 36 chr13 13607095 13607812 -106676500 + L1MB4 LINE L1 5399 6161 -19 2 688 426 206 68 0 chr13 13607826 13607928 -106676384 - B1F1 SINE Alu -2 115 6 2 688 21 71 0 0 chr13 13607967 13608009 -106676303 + AT_rich Low_complexity Low_complexity 1 42 0 2 688 25 0 0 0 chr13 13608035 13608060 -106676252 + AT_rich Low_complexity Low_complexity 1 25 0 2 688 695 110 165 0 chr13 13608250 13608359 -106675953 - B1_Mus1 SINE Alu -6 142 16 2 688 223 130 55 18 chr13 13608369 13608424 -106675888 + (TTATA)n Simple_repeat Simple_repeat 1 57 0 2 688 780 211 234 0 chr13 13608424 13608599 -106675713 - B3 SINE B2 0 216 1 2 688 266 172 0 79 chr13 13608625 13608688 -106675624 - B4 SINE B4 -192 100 43 2 688 774 195 103 13 chr13 13608719 13608875 -106675437 + ID_B1 SINE B4 38 207 -17 2 688 255 176 56 42 chr13 13608875 13608946 -106675366 - ID4 SINE ID -9 74 3 2 688 401 225 0 0 chr13 13609754 13609825 -106674487 - ID4_ SINE ID -11 72 2 2 688 4693 47 16 3 chr13 13609979 13610559 -106673753 + LTRIS_Mus LTR ERV1 1 587 0 2 688 344 287 44 0 chr13 13610787 13610923 -106673389 - ID_B1 SINE B4 -5 219 78 2 688 607 258 82 82 chr13 13610945 13610981 -106673331 - B3 SINE B2 -8 187 153 2 688 237 98 0 0 chr13 13610981 13611022 -106673290 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 2 688 607 272 75 19 chr13 13611022 13611167 -106673145 - B3 SINE B2 -57 159 7 2 688 1004 290 126 5 chr13 13611204 13611616 -106672696 + MLT1C LTR MaLR 6 467 0 3 688 587 296 76 53 chr13 13611818 13611912 -106672400 + B4 SINE B4 1 96 -196 3 688 853 136 71 0 chr13 13611912 13612052 -106672260 + B1_Mur4 SINE Alu 1 150 0 3 688 587 296 76 53 chr13 13612052 13612182 -106672130 + B4 SINE B4 97 229 -63 3 688 316 111 0 27 chr13 13612212 13612286 -106672026 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 688 815 10 97 0 chr13 13612553 13612656 -106671656 + B1_Mus1 SINE Alu 36 148 0 3 688 3088 137 63 6 chr13 13612839 13612925 -106671387 - RLTR20C LTR ERVK 0 534 436 3 688 411 21 0 0 chr13 13612925 13612973 -106671339 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 688 3088 137 63 6 chr13 13612973 13613391 -106670921 - RLTR20C LTR ERVK -99 435 2 3 688 2275 11 114 0 chr13 13613797 13614059 -106670253 - RLTR10B LTR ERVK 0 292 1 3 688 1965 55 0 0 chr13 13614059 13614294 -106670018 - MMERVK10C-int LTR ERVK 0 7581 7347 3 688 702 65 213 0 chr13 13614294 13614402 -106669910 - MMERVK10C-int LTR ERVK -2015 5566 5436 3 688 361 21 106 0 chr13 13614388 13614435 -106669877 - MMERVK10C-int LTR ERVK -7305 276 225 3 688 254 222 0 0 chr13 13614435 13614480 -106669832 - RLTR27 LTR ERVK -34 275 231 3 688 1456 67 0 0 chr13 13614480 13614660 -106669652 - MMERVK10C-int LTR ERVK -7401 180 1 3 688 2239 19 114 0 chr13 13614660 13614922 -106669390 - RLTR10B LTR ERVK 0 292 1 3 688 680 317 126 28 chr13 13614924 13615171 -106669141 - B4A SINE B4 -13 279 9 3 688 225 0 0 0 chr13 13615542 13615567 -106668745 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 688 1214 61 0 0 chr13 13615570 13615717 -106668595 - B1_Mm SINE Alu 0 147 1 3 688 249 33 0 0 chr13 13616837 13616867 -106667445 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 688 248 301 0 27 chr13 13616939 13617014 -106667298 - B4A SINE B4 -4 288 216 3 688 718 288 21 42 chr13 13617047 13617286 -106667026 - B4A SINE B4 0 292 59 3 688 261 0 0 0 chr13 13617783 13617812 -106666500 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 688 314 279 62 93 chr13 13617898 13618060 -106666252 - B4A SINE B4 -132 160 4 3 688 533 267 51 96 chr13 13618620 13618798 -106665514 - ID_B1 SINE B4 -52 172 3 3 688 585 287 13 26 chr13 13618839 13618993 -106665319 + RMER30 DNA MER1_type 10 161 -41 3 688 1012 97 14 20 chr13 13619219 13619366 -106664946 + B1_Mus2 SINE Alu 1 146 -1 3 688 441 0 0 0 chr13 13619442 13619491 -106664821 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 688 566 245 6 55 chr13 13619515 13619679 -106664633 + RSINE1 SINE B4 2 157 -8 3 688 213 322 35 0 chr13 13620341 13620484 -106663828 + (CA)n Simple_repeat Simple_repeat 1 148 0 3 688 209 329 36 0 chr13 13620573 13620740 -106663572 + (CA)n Simple_repeat Simple_repeat 2 174 0 3 688 372 306 137 0 chr13 13621190 13621314 -106662998 + B1F1 SINE Alu 7 147 -2 3 688 375 200 0 14 chr13 13621924 13621995 -106662317 - ID4 SINE ID -13 70 1 3 688 501 212 51 36 chr13 13621998 13622135 -106662177 - B1F SINE Alu 0 149 11 3 688 865 245 19 44 chr13 13622227 13622422 -106661890 + B3 SINE B2 1 191 -25 3 688 3047 58 13 0 chr13 13622422 13622802 -106661510 - L1_Mus1 LINE L1 0 6567 6183 3 688 189 0 0 0 chr13 13622811 13622832 -106661480 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 3 688 283 289 31 0 chr13 13623257 13623354 -106660958 - PB1D10 SINE Alu -16 101 2 3 688 368 259 199 7 chr13 13623410 13623546 -106660766 - L1MC4 LINE L1 -476 7566 7405 3 688 248 140 60 0 chr13 13623555 13623605 -106660707 - L1MC4 LINE L1 -605 7277 7225 3 688 346 247 47 12 chr13 13624129 13624215 -106660097 + MLT1A1 LTR MaLR 19 107 -301 3 688 472 282 14 7 chr13 13624360 13624503 -106659809 + B1F2 SINE Alu 3 146 -3 3 688 235 285 57 71 chr13 13624835 13624975 -106659337 + MIRb SINE MIR 86 223 -45 3 688 1739 228 46 13 chr13 13625178 13625573 -106658739 + MTD LTR MaLR 11 418 -1 3 688 234 0 0 0 chr13 13626242 13626268 -106658044 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 3 688 246 32 0 0 chr13 13626468 13626499 -106657813 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 688 608 302 88 62 chr13 13626515 13626822 -106657490 - ORR1E LTR MaLR -3 356 42 3 688 1030 233 98 23 chr13 13626829 13627093 -106657219 + B4 SINE B4 5 288 -4 3 688 712 206 133 33 chr13 13627180 13627391 -106656921 - MLT1C LTR MaLR -197 270 39 3 688 199 336 0 76 chr13 13627436 13627555 -106656757 + MIRb SINE MIR 94 203 -65 3 688 261 0 0 0 chr13 13627621 13627650 -106656662 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 688 4951 144 24 11 chr13 13627652 13628496 -106655816 + RLTR13A LTR ERVK 1 855 0 3 688 1980 171 79 3 chr13 13628566 13628919 -106655393 - MTB_Mm LTR MaLR -27 380 1 3 688 369 98 0 0 chr13 13629102 13629153 -106655159 - HAL1-3A_ME LINE L1 -832 2026 1976 3 688 1953 158 62 125 chr13 13629211 13629660 -106654652 + MTC LTR MaLR 1 421 0 3 688 238 252 40 59 chr13 13629689 13629841 -106654471 + (TATATG)n Simple_repeat Simple_repeat 3 151 0 3 688 731 284 23 47 chr13 13630379 13630593 -106653719 + ID_B1 SINE B4 1 209 -15 3 688 318 297 57 37 chr13 13630594 13630733 -106653579 + PB1D10 SINE Alu 6 143 -6 3 688 362 254 32 63 chr13 13631194 13631320 -106652992 + MIRc SINE MIR 35 156 -112 3 10 229 335 143 43 chr13 13631338 13631547 -106652765 + MIRc SINE MIR 22 251 -17 3 689 481 239 133 0 chr13 13631614 13631727 -106652585 - ID_B1 SINE B4 -11 213 86 3 689 2548 89 3 87 chr13 13631775 13632167 -106652145 + RLTR10D LTR ERVK 1 359 0 3 689 6060 30 36 0 chr13 13632167 13632880 -106651432 + IAP-d-int LTR ERVK 1 739 -5803 3 689 23136 47 16 5 chr13 13632947 13633275 -106651037 + IAP-d-int LTR ERVK 3188 3515 -3027 3 689 4252 40 87 2 chr13 13633275 13633795 -106650517 + LTRIS2 LTR ERV1 1 564 0 3 689 23136 47 16 5 chr13 13633795 13636269 -106648043 + IAP-d-int LTR ERVK 3516 6021 -521 3 689 3597 48 0 0 chr13 13636272 13636687 -106647625 + IAP-d-int LTR ERVK 6128 6542 0 3 689 2437 109 3 87 chr13 13636687 13637079 -106647233 + RLTR10D LTR ERVK 1 359 0 3 689 355 242 0 0 chr13 13637083 13637149 -106647163 - ID4 SINE ID -15 68 3 3 689 21 0 0 0 chr13 13637170 13637191 -106647121 + AT_rich Low_complexity Low_complexity 1 21 0 3 689 303 28 0 0 chr13 13637276 13637312 -106647000 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 689 225 0 0 0 chr13 13637312 13637336 -106646976 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 689 299 328 87 16 chr13 13637548 13637675 -106646637 - MLT1A0 LTR MaLR -67 298 163 3 689 201 263 13 26 chr13 13637676 13637754 -106646558 + GA-rich Low_complexity Low_complexity 3 79 0 3 689 204 97 0 0 chr13 13638217 13638248 -106646064 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 689 351 164 16 0 chr13 13638816 13638877 -106645435 - B1_Mur4 SINE Alu -65 85 24 3 689 423 188 0 70 chr13 13638887 13638973 -106645339 - ID_B1 SINE B4 -64 160 81 3 689 240 35 0 0 chr13 13639499 13639528 -106644784 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 3 689 616 307 104 58 chr13 13639544 13639803 -106644509 + B4A SINE B4 1 271 -21 3 689 248 341 91 43 chr13 13640199 13640470 -106643842 - MTEb LTR MaLR -2 377 85 3 689 2118 148 51 58 chr13 13640481 13640554 -106643758 + MTC LTR MaLR 3 75 -346 3 689 327 83 0 89 chr13 13640554 13640633 -106643679 + L1Md_F3 LINE L1 6513 6584 0 3 689 2118 148 51 58 chr13 13640633 13640954 -106643358 + MTC LTR MaLR 76 394 -27 3 689 310 340 80 20 chr13 13641077 13641227 -106643085 + MIR SINE MIR 60 218 -44 3 689 495 0 0 0 chr13 13641582 13641637 -106642675 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 689 414 0 0 0 chr13 13641640 13641686 -106642626 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 689 1016 280 126 84 chr13 13642228 13642837 -106641475 - RLTR26 LTR ERVK -5 637 3 3 689 555 242 57 73 chr13 13642950 13643142 -106641170 - RLTR26 LTR ERVK -226 416 228 3 689 673 252 0 14 chr13 13643687 13643828 -106640484 + RSINE1 SINE B4 3 141 -24 3 689 423 0 0 0 chr13 13643841 13643888 -106640424 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 3 689 432 216 14 12 chr13 13643910 13644020 -106640292 + B1F1 SINE Alu 5 116 -33 3 689 292 345 65 45 chr13 13643911 13644066 -106640246 + B4A SINE B4 91 248 -44 3 689 406 175 13 14 chr13 13644067 13644152 -106640160 + ID4 SINE ID 6 90 -62 3 689 207 0 0 0 chr13 13644152 13644175 -106640137 + (CAA)n Simple_repeat Simple_repeat 2 24 0 3 689 905 171 6 0 chr13 13644675 13644850 -106639462 + GA-rich Low_complexity Low_complexity 2 177 0 3 689 1134 52 123 39 chr13 13644882 13645061 -106639251 + B2_Mm2 SINE B2 2 195 0 3 689 329 320 40 30 chr13 13645092 13645192 -106639120 + B4 SINE B4 1 101 -191 3 689 367 247 126 35 chr13 13645213 13645340 -106638972 + B4A SINE B4 147 292 0 3 689 306 292 108 0 chr13 13645348 13645468 -106638844 + RMER5 LTR ERV1 48 180 -354 3 689 3615 64 4 29 chr13 13645499 13645979 -106638333 - L1_Mus3 LINE L1 -91 6547 6080 3 689 439 284 73 80 chr13 13646044 13646358 -106637954 - Lx8 LINE L1 -8 7465 7154 3 689 184 378 67 0 chr13 13646528 13646663 -106637649 + L2 LINE L2 2748 2891 -528 3 689 430 244 107 16 chr13 13646752 13646873 -106637439 + B1F SINE Alu 5 136 -13 3 689 455 0 18 0 chr13 13646974 13647029 -106637283 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 3 689 968 239 34 46 chr13 13647952 13648277 -106636035 + RLTR15 LTR ERVK 1 321 -38 3 689 304 316 8 143 chr13 13648339 13648472 -106635840 + PB1D10 SINE Alu 2 116 -1 3 689 415 286 135 13 chr13 13648702 13648858 -106635454 - MIR SINE MIR -48 214 40 3 689 2354 193 5 5 chr13 13649624 13650045 -106634267 + MTC LTR MaLR 1 421 0 3 689 853 285 16 5 chr13 13650087 13650274 -106634038 - ID_B1 SINE B4 -29 195 7 3 689 369 0 0 0 chr13 13650461 13650502 -106633810 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 689 225 0 0 0 chr13 13650667 13650692 -106633620 + (T)n Simple_repeat Simple_repeat 1 25 0 3 689 183 80 0 0 chr13 13650824 13650849 -106633463 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 3 689 874 173 0 14 chr13 13650849 13650990 -106633322 - B1_Mur3 SINE Alu -10 139 1 3 689 249 320 108 31 chr13 13651310 13651439 -106632873 - MLT1D LTR MaLR -32 473 335 3 689 451 217 50 42 chr13 13651722 13651842 -106632470 - MLT1D LTR MaLR -375 130 10 3 689 182 370 170 7 chr13 13652026 13652173 -106632139 + MIRm SINE MIR 96 266 -10 3 689 371 271 108 19 chr13 13652321 13652479 -106631833 - RMER15 LTR ERVL -14 561 390 4 689 8088 59 0 21 chr13 13652482 13653669 -106630643 + L1_Mus1 LINE L1 5406 6567 0 4 689 668 279 175 13 chr13 13654185 13654196 -106630116 + MTEa LTR MaLR 3 11 -368 4 689 3499 23 5 0 chr13 13654196 13654590 -106629722 - MTA_Mm LTR MaLR 0 396 1 4 689 668 279 175 13 chr13 13654590 13654807 -106629505 + MTEa LTR MaLR 12 268 -111 4 689 199 250 150 0 chr13 13655010 13655070 -106629242 + MIR SINE MIR 75 143 -65 4 689 4544 94 19 2 chr13 13655445 13656082 -106628230 + Lx LINE L1 6006 6653 -1 4 689 798 136 0 0 chr13 13656194 13656363 -106627949 + (GA)n Simple_repeat Simple_repeat 2 170 0 4 689 282 250 26 26 chr13 13656408 13656486 -106627826 + CT-rich Low_complexity Low_complexity 4 81 0 4 689 1861 155 19 96 chr13 13657234 13657598 -106626714 + RLTR14 LTR ERV1 7 342 -40 4 689 1124 209 0 28 chr13 13657637 13657854 -106626458 - B3 SINE B2 -5 211 1 4 689 199 274 65 0 chr13 13658026 13658088 -106626224 - MER5A DNA MER1_type -106 83 18 4 689 1312 175 54 73 chr13 13658104 13658418 -106625894 + RMER1B Other Other 757 1064 -2 4 689 721 269 117 47 chr13 13658436 13658755 -106625557 + ORR1E LTR MaLR 30 379 0 4 689 1096 59 0 0 chr13 13659406 13659541 -106624771 + B1_Mus2 SINE Alu 2 136 -11 4 689 351 0 0 0 chr13 13659541 13659580 -106624732 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 689 1298 306 21 9 chr13 13660282 13660609 -106623703 - MTE2b LTR MaLR -45 334 4 4 689 732 148 79 29 chr13 13661115 13661254 -106623058 - B1_Mus1 SINE Alu 0 148 3 4 689 906 222 72 10 chr13 13662229 13662438 -106621874 + ID_B1 SINE B4 1 222 -2 4 689 26 0 0 0 chr13 13662920 13662946 -106621366 + AT_rich Low_complexity Low_complexity 1 26 0 4 689 477 34 0 0 chr13 13662962 13663021 -106621291 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 689 300 250 0 111 chr13 13663024 13663105 -106621207 - RSINE1 SINE B4 -24 141 70 4 689 890 270 15 0 chr13 13663361 13663565 -106620747 + B3 SINE B2 3 209 -7 4 689 344 282 0 0 chr13 13663744 13663815 -106620497 - RSINE1 SINE B4 -93 72 2 4 689 243 0 0 0 chr13 13664652 13664679 -106619633 + (TGG)n Simple_repeat Simple_repeat 2 28 0 4 689 1411 251 72 32 chr13 13664718 13665092 -106619220 + MTD LTR MaLR 31 419 0 4 689 641 266 110 73 chr13 13665302 13665574 -106618738 + B4 SINE B4 1 282 -10 4 689 763 261 51 5 chr13 13666968 13667164 -106617148 + ID_B1 SINE B4 2 206 -18 4 689 694 268 98 23 chr13 13667562 13667818 -106616494 + B4 SINE B4 4 278 -14 4 689 423 98 0 0 chr13 13667851 13667912 -106616400 + (CACG)n Simple_repeat Simple_repeat 2 62 0 4 689 204 340 133 49 chr13 13668014 13668240 -106616072 + L2b LINE L2 3023 3267 -120 4 689 924 270 46 15 chr13 13668276 13668536 -106615776 - B4 SINE B4 0 292 25 4 689 777 293 70 14 chr13 13668570 13668999 -106615313 - L1MB3 LINE L1 -113 6070 5618 4 689 195 42 0 0 chr13 13669651 13669675 -106614637 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 4 689 229 354 15 0 chr13 13669819 13669884 -106614428 + ZP3AR Satellite Satellite 15 80 -132 4 689 222 271 0 0 chr13 13669846 13669894 -106614418 + ID2 SINE ID 1 48 -35 4 689 318 26 0 0 chr13 13669907 13669946 -106614366 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 689 539 112 35 0 chr13 13670322 13670438 -106613874 + (TCTA)n Simple_repeat Simple_repeat 1 120 0 4 689 348 374 47 7 chr13 13670444 13670592 -106613720 - RSINE1 SINE B4 -9 156 3 4 689 629 268 143 23 chr13 13670592 13670785 -106613527 - ID_B1 SINE B4 -68 224 1 4 689 654 264 57 6 chr13 13670837 13671012 -106613300 + B3A SINE B2 1 184 -14 4 689 456 261 9 0 chr13 13671700 13671811 -106612501 - PB1D10 SINE Alu -5 112 1 4 689 192 97 0 0 chr13 13671820 13671851 -106612461 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 689 627 14 0 0 chr13 13671852 13671924 -106612388 + (CA)n Simple_repeat Simple_repeat 2 73 0 4 689 862 300 51 0 chr13 13671933 13672190 -106612122 - B4A SINE B4 -18 274 5 4 689 228 219 24 12 chr13 13672673 13672756 -106611556 + (CAT)n Simple_repeat Simple_repeat 3 86 0 4 689 739 273 25 15 chr13 13673033 13673230 -106611082 - B3 SINE B2 -17 199 1 4 689 259 288 14 0 chr13 13673247 13673320 -106610992 - ID4 SINE ID -6 77 4 4 689 439 310 27 14 chr13 13673334 13673481 -106610831 - B1F1 SINE Alu 0 149 1 4 689 681 180 0 52 chr13 13673608 13673743 -106610569 - ORR1C2 LTR MaLR -256 128 1 4 689 198 152 51 0 chr13 13673827 13673886 -106610426 + GA-rich Low_complexity Low_complexity 3 64 0 4 689 303 239 0 0 chr13 13674099 13674166 -106610146 + MER5A1 DNA MER1_type 95 161 -5 4 689 272 322 60 17 chr13 13674432 13674549 -106609763 - Charlie18a DNA MER1_type -146 196 75 4 689 21 0 0 0 chr13 13674886 13674907 -106609405 + AT_rich Low_complexity Low_complexity 1 21 0 4 689 301 343 47 9 chr13 13674907 13675013 -106609299 - PB1D10 SINE Alu -5 112 3 4 689 217 273 167 0 chr13 13675139 13675205 -106609107 + ID4 SINE ID 3 79 -4 4 689 1073 238 146 16 chr13 13675267 13675589 -106608723 - ORR1E LTR MaLR 0 374 1 4 689 248 263 17 34 chr13 13676097 13676156 -106608156 - ID4 SINE ID -3 80 23 4 689 589 168 19 0 chr13 13676336 13676443 -106607869 + PB1D9 SINE Alu 12 120 0 4 689 649 72 18 18 chr13 13676587 13676700 -106607612 + (TCTCTG)n Simple_repeat Simple_repeat 2 114 0 4 689 180 0 0 0 chr13 13676702 13676722 -106607590 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 689 221 249 235 109 chr13 13677333 13677554 -106606758 - B4A SINE B4 -1 291 43 4 689 257 137 20 0 chr13 13677554 13677605 -106606707 - SYNREP_MM Satellite Satellite -115 151 100 4 689 520 292 0 26 chr13 13677840 13677956 -106606356 - PB1D7 SINE Alu 0 120 8 4 689 212 369 0 0 chr13 13677898 13677963 -106606349 - B4A SINE B4 -142 150 86 4 689 312 70 0 0 chr13 13678017 13678060 -106606252 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 689 221 167 47 23 chr13 13678176 13678219 -106606093 + PB1 SINE Alu 84 127 0 4 689 299 293 0 0 chr13 13678228 13678310 -106606002 + ID4 SINE ID 2 83 0 4 689 373 357 119 5 chr13 13678650 13678934 -106605378 - L2a LINE L2 -251 3175 2853 4 689 469 226 71 54 chr13 13679272 13679384 -106604928 - PB1D10 SINE Alu 0 117 4 4 689 559 172 86 0 chr13 13679291 13679384 -106604928 - ID_B1 SINE B4 -39 185 85 4 689 248 342 69 17 chr13 13679384 13679406 -106604906 - MT2B LTR ERVL -340 260 140 4 689 612 318 0 0 chr13 13679459 13679585 -106604727 - RSINE1 SINE B4 0 165 40 4 689 300 389 0 0 chr13 13679569 13679659 -106604653 - PB1D7 SINE Alu -30 90 1 4 689 192 308 0 0 chr13 13680084 13680136 -106604176 + MIRm SINE MIR 224 275 -1 4 689 828 237 122 45 chr13 13681168 13681588 -106602724 - MER31A LTR ERV1 -1 660 1 4 689 213 108 0 0 chr13 13681752 13681789 -106602523 + (T)n Simple_repeat Simple_repeat 1 37 0 4 689 261 0 0 0 chr13 13681848 13681877 -106602435 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 689 1060 301 92 28 chr13 13681880 13682314 -106601998 - RMER5 LTR ERV1 -39 495 34 4 689 435 63 0 0 chr13 13683432 13683495 -106600817 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 4 689 579 321 141 31 chr13 13684023 13684658 -106599654 - L2a LINE L2 -82 3344 2625 4 689 302 254 28 0 chr13 13684900 13684971 -106599341 - BC1_Mm scRNA scRNA -64 88 16 4 689 518 171 89 62 chr13 13685424 13685536 -106598776 + PB1 SINE Alu 6 120 -7 4 689 263 290 16 0 chr13 13685546 13685608 -106598704 + ID4 SINE ID 1 63 -20 4 689 387 0 0 0 chr13 13686286 13686329 -106597983 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 689 1401 217 120 23 chr13 13686595 13687038 -106597274 + L1MC1 LINE L1 5830 6315 -18 4 689 217 247 236 45 chr13 13687073 13687162 -106597150 - PB1 SINE Alu -20 107 2 4 689 3213 52 10 0 chr13 13688355 13688762 -106595550 + L1Md_F2 LINE L1 6170 6580 -2 4 689 834 289 70 9 chr13 13689245 13689472 -106594840 + B4 SINE B4 1 241 -51 4 689 200 281 0 17 chr13 13689474 13689493 -106594819 + (TATG)n Simple_repeat Simple_repeat 1 19 0 4 689 276 100 0 0 chr13 13689493 13689533 -106594779 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 689 200 281 0 17 chr13 13689533 13689571 -106594741 + (TATG)n Simple_repeat Simple_repeat 3 40 0 4 689 201 178 0 0 chr13 13689584 13689629 -106594683 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 689 304 323 111 85 chr13 13690001 13690471 -106593841 - L2 LINE L2 -1075 2344 1863 4 689 315 226 93 64 chr13 13690632 13690738 -106593574 - PB1D7 SINE Alu -4 116 1 4 689 426 171 40 0 chr13 13690769 13690845 -106593467 - B3A SINE B2 -119 79 1 4 689 3581 33 23 0 chr13 13691571 13691999 -106592313 - L1Md_T LINE L1 0 6582 6145 4 689 924 249 98 11 chr13 13692040 13692221 -106592091 - B4 SINE B4 -4 288 88 4 689 762 22 0 0 chr13 13692221 13692313 -106591999 + (TTTC)n Simple_repeat Simple_repeat 2 93 0 4 689 924 249 98 11 chr13 13692313 13692395 -106591917 - B4 SINE B4 -205 87 4 4 689 261 271 34 0 chr13 13692449 13692508 -106591804 - ID4 SINE ID -20 63 3 4 689 294 95 0 0 chr13 13692519 13692561 -106591751 + (T)n Simple_repeat Simple_repeat 1 42 0 4 689 1210 68 0 0 chr13 13692561 13692709 -106591603 - B1_Mus1 SINE Alu 0 148 1 4 689 778 224 72 0 chr13 13692933 13693085 -106591227 - RSINE1 SINE B4 0 165 3 5 689 811 207 10 102 chr13 13693092 13693297 -106591015 - B3A SINE B2 -12 186 1 5 689 21 0 0 0 chr13 13693304 13693325 -106590987 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 309 339 27 18 chr13 13693620 13693731 -106590581 + PB1D10 SINE Alu 2 113 -4 5 689 305 284 79 44 chr13 13694004 13694118 -106590194 - PB1D9 SINE Alu -2 118 1 5 689 4590 61 2 2 chr13 13694145 13694733 -106589579 - L1_Mus4 LINE L1 -8 6628 6041 5 689 2170 189 93 14 chr13 13695461 13695956 -106588356 - Lx5 LINE L1 -3 7047 6514 5 689 1821 185 5 76 chr13 13695977 13696271 -106588041 + Lx5 LINE L1 6175 6444 -606 5 689 1228 48 0 0 chr13 13696271 13696418 -106587894 - B1_Mm SINE Alu 0 147 1 5 689 1821 185 5 76 chr13 13696418 13696504 -106587808 + Lx5 LINE L1 6445 6528 -522 5 689 940 211 0 148 chr13 13696802 13696991 -106587321 - B3 SINE B2 -26 190 21 5 689 180 299 102 11 chr13 13697445 13697533 -106586779 - MIRb SINE MIR -1 267 172 5 689 916 27 0 0 chr13 13697925 13698037 -106586275 - B1_Mus1 SINE Alu 0 148 37 5 689 294 57 37 19 chr13 13698211 13698265 -106586047 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 689 1262 253 64 9 chr13 13698450 13698777 -106585535 - ORR1E-int LTR MaLR -1235 345 1 5 689 258 250 78 103 chr13 13698766 13698882 -106585430 - ORR1E LTR MaLR 0 359 247 5 689 370 307 147 74 chr13 13699183 13699258 -106585054 + B4A SINE B4 2 66 -226 5 689 1180 50 0 0 chr13 13699258 13699398 -106584914 + B1_Mus1 SINE Alu 1 140 -8 5 689 447 52 0 0 chr13 13699398 13699456 -106584856 + (CAAAA)n Simple_repeat Simple_repeat 2 59 0 5 689 370 307 147 74 chr13 13699456 13699569 -106584743 + B4A SINE B4 67 204 -88 5 689 258 224 25 50 chr13 13699573 13699653 -106584659 + GA-rich Low_complexity Low_complexity 5 82 0 5 689 386 250 31 42 chr13 13699653 13699749 -106584563 + B4A SINE B4 198 292 0 5 689 347 283 122 24 chr13 13700111 13700234 -106584078 + RSINE1 SINE B4 3 137 -28 5 689 313 331 105 31 chr13 13701282 13701503 -106582809 + L2b LINE L2 2950 3185 -202 5 689 815 239 0 19 chr13 13701639 13701801 -106582511 - RSINE1 SINE B4 -4 161 3 5 689 383 278 52 71 chr13 13702007 13702162 -106582150 - ORR1E LTR MaLR -111 248 97 5 689 609 289 20 34 chr13 13702372 13702519 -106581793 + RSINE1 SINE B4 11 155 -10 5 689 1800 185 46 46 chr13 13702519 13702888 -106581424 + ORR1D1 LTR MaLR 6 374 0 5 689 29 0 0 0 chr13 13702901 13702930 -106581382 + AT_rich Low_complexity Low_complexity 1 29 0 5 689 309 324 145 80 chr13 13703201 13703600 -106580712 + L3 LINE CR1 2800 3224 -1265 5 689 247 194 58 97 chr13 13704274 13704377 -106579935 - RLTR10B2 LTR ERVK -155 210 112 5 689 4958 38 10 8 chr13 13704512 13705117 -106579195 + L1Md_F2 LINE L1 5977 6582 0 5 689 1543 290 49 20 chr13 13705128 13705762 -106578550 - Lx8 LINE L1 -13 7460 6809 5 689 896 200 25 31 chr13 13706344 13706540 -106577772 + URR1A DNA MER1_type 1 195 -31 5 689 1040 205 9 70 chr13 13707395 13707573 -106576739 - B3 SINE B2 -12 204 41 5 689 1651 133 7 4 chr13 13707573 13707845 -106576467 - Lx LINE L1 0 6654 6382 5 689 1040 205 9 70 chr13 13707845 13707881 -106576431 - B3 SINE B2 -176 40 3 5 689 774 246 63 10 chr13 13708204 13708246 -106576066 - B3 SINE B2 0 216 175 5 689 408 20 0 0 chr13 13708246 13708295 -106576017 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 689 774 246 63 10 chr13 13708295 13708457 -106575855 - B3 SINE B2 -42 174 2 5 689 2630 166 10 50 chr13 13709264 13709766 -106574546 - RLTR40 LTR ERVK 0 817 336 5 689 762 188 7 46 chr13 13709766 13709917 -106574395 + B1_Mm SINE Alu 1 145 -2 5 689 1786 182 20 45 chr13 13709978 13710204 -106574108 - RLTR40 LTR ERVK -469 348 126 5 689 2232 135 88 3 chr13 13710204 13710567 -106573745 - ORR1B1 LTR MaLR 0 394 1 5 689 1786 182 20 45 chr13 13710567 13710581 -106573731 - RLTR40 LTR ERVK -692 125 113 5 689 735 243 0 13 chr13 13710581 13710731 -106573581 - B1_Mur4 SINE Alu 0 150 3 5 689 1786 182 20 45 chr13 13710731 13710846 -106573466 - RLTR40 LTR ERVK -705 112 1 5 689 364 299 10 67 chr13 13711058 13711162 -106573150 - PB1D10 SINE Alu -19 98 1 5 689 392 305 18 9 chr13 13711175 13711205 -106573107 + L1M5 LINE L1 4378 4407 -1739 5 689 1950 180 90 107 chr13 13711205 13711747 -106572565 - RMER16 LTR ERVK 0 533 1 5 689 392 305 18 9 chr13 13711747 13711944 -106572368 + L1M5 LINE L1 4408 4606 -1540 5 689 396 273 68 9 chr13 13711964 13712173 -106572139 - L1ME2 LINE L1 -13 6165 5945 5 689 1011 218 16 0 chr13 13712344 13712532 -106571780 - B3 SINE B2 -25 191 1 5 689 4837 44 22 0 chr13 13712876 13713468 -106570844 + L1Md_F2 LINE L1 5978 6582 0 5 689 681 242 119 48 chr13 13713971 13714348 -106569964 - L1ME2 LINE L1 -312 5852 5449 5 689 444 219 16 8 chr13 13714390 13714519 -106569793 + (CATA)n Simple_repeat Simple_repeat 3 132 0 5 689 216 97 0 0 chr13 13714526 13714557 -106569755 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 689 685 272 124 37 chr13 13714565 13714863 -106569449 - MER44A DNA MER2_type -10 329 6 5 689 244 275 12 0 chr13 13714998 13715087 -106569225 + T-rich Low_complexity Low_complexity 1 90 0 5 689 260 350 0 17 chr13 13715087 13715206 -106569106 - PB1D10 SINE Alu 0 117 1 5 689 244 275 12 0 chr13 13715206 13715217 -106569095 + T-rich Low_complexity Low_complexity 4 14 0 5 689 409 197 0 0 chr13 13715243 13715314 -106568998 - ID4 SINE ID -10 73 3 5 689 242 231 55 18 chr13 13715782 13715892 -106568420 - L1MC LINE L1 -1293 4853 4740 5 689 446 279 0 0 chr13 13715900 13715986 -106568326 + RSINE1 SINE B4 6 91 -74 5 689 246 62 0 0 chr13 13716033 13716065 -106568247 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 5 689 1320 280 99 26 chr13 13716098 13716981 -106567331 - L1ME2 LINE L1 -1425 4721 3733 5 689 401 169 12 0 chr13 13717046 13717129 -106567183 + (TA)n Simple_repeat Simple_repeat 1 84 0 5 689 526 329 56 21 chr13 13717427 13717660 -106566652 - MLT1H-int LTR MaLR -644 765 525 5 689 533 314 83 21 chr13 13717733 13717925 -106566387 + MER58C DNA MER1_type 12 215 0 5 689 198 0 0 0 chr13 13718024 13718046 -106566266 + (GA)n Simple_repeat Simple_repeat 2 23 0 5 689 26 0 0 0 chr13 13718133 13718159 -106566153 + AT_rich Low_complexity Low_complexity 1 26 0 5 689 4085 58 7 0 chr13 13718165 13718795 -106565517 - L1_Mus1 LINE L1 -435 6131 5497 5 689 3680 50 0 0 chr13 13718795 13719237 -106565075 + L1_Mus1 LINE L1 6126 6567 0 5 689 760 215 22 0 chr13 13719361 13719496 -106564816 - B1_Mur2 SINE Alu -10 139 2 5 689 310 338 75 8 chr13 13719557 13719691 -106564621 + B1F1 SINE Alu 5 147 -2 5 689 207 0 0 0 chr13 13719796 13719819 -106564493 + (A)n Simple_repeat Simple_repeat 1 23 0 5 689 477 0 0 0 chr13 13720742 13720795 -106563517 + (CAAAC)n Simple_repeat Simple_repeat 2 54 0 5 689 355 297 104 98 chr13 13720834 13720998 -106563314 + RSINE1 SINE B4 1 165 0 5 689 371 139 28 0 chr13 13721918 13721990 -106562322 + (CATA)n Simple_repeat Simple_repeat 1 74 0 5 689 32 43 0 0 chr13 13721996 13722042 -106562270 + AT_rich Low_complexity Low_complexity 1 46 0 5 689 269 191 64 0 chr13 13722098 13722145 -106562167 + RSINE1 SINE B4 3 52 -113 5 689 26 30 0 0 chr13 13722848 13722881 -106561431 + AT_rich Low_complexity Low_complexity 1 33 0 5 689 980 142 0 0 chr13 13723863 13724011 -106560301 - B1_Mus1 SINE Alu 0 148 1 5 689 4456 144 66 20 chr13 13724208 13725235 -106559077 - Lx2B LINE L1 -27 6627 5587 5 689 547 60 0 35 chr13 13728561 13728648 -106555664 - Lx LINE L1 -6 6648 6565 5 689 497 16 16 0 chr13 13729350 13729412 -106554900 + (TA)n Simple_repeat Simple_repeat 1 63 0 5 689 329 390 22 0 chr13 13731000 13731136 -106553176 - Lx8 LINE L1 -181 7292 7154 5 689 208 351 80 13 chr13 13731242 13731317 -106552995 - L2c LINE L2 -28 3359 3280 5 689 856 232 63 10 chr13 13731739 13731944 -106552368 - B3 SINE B2 0 216 1 5 689 861 169 7 0 chr13 13731962 13732104 -106552208 - B1_Mus1 SINE Alu -5 143 1 5 689 180 0 0 0 chr13 13733716 13733736 -106550576 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 5 689 1383 175 226 59 chr13 13734064 13734418 -106549894 + MTD LTR MaLR 5 417 -2 5 689 21 0 0 0 chr13 13734598 13734619 -106549693 + AT_rich Low_complexity Low_complexity 1 21 0 5 689 643 182 85 28 chr13 13734681 13734822 -106549490 - B1_Mur2 SINE Alu 0 149 1 5 689 528 257 20 54 chr13 13734901 13735049 -106549263 - RSINE1 SINE B4 -21 144 2 5 689 568 268 137 15 chr13 13735049 13735229 -106549083 - B4A SINE B4 -62 230 27 5 689 183 80 0 0 chr13 13736168 13736193 -106548119 + (TC)n Simple_repeat Simple_repeat 1 25 0 5 689 216 100 0 149 chr13 13736635 13736729 -106547583 + (CACTG)n Simple_repeat Simple_repeat 5 84 0 5 689 840 278 101 23 chr13 13736878 13737306 -106547006 - L1MC4 LINE L1 -505 7537 7077 5 689 263 294 84 50 chr13 13737340 13737519 -106546793 - L1MC3 LINE L1 -109 7676 7492 5 689 608 183 75 58 chr13 13737739 13737913 -106546399 + B2_Mm2 SINE B2 1 177 -18 5 689 1400 170 49 211 chr13 13737987 13738053 -106546259 - ORR1D1 LTR MaLR 0 374 309 5 689 231 36 0 0 chr13 13738053 13738081 -106546231 + (TC)n Simple_repeat Simple_repeat 1 28 0 5 689 1400 170 49 211 chr13 13738081 13738460 -106545852 - ORR1D1 LTR MaLR -66 308 1 5 689 736 231 57 31 chr13 13740301 13740455 -106543857 + B3A SINE B2 2 154 -44 5 689 186 43 0 0 chr13 13740455 13740478 -106543834 + (CAGG)n Simple_repeat Simple_repeat 4 26 0 5 689 736 231 57 31 chr13 13740478 13740515 -106543797 + B3A SINE B2 155 198 0 5 689 24 67 0 0 chr13 13742760 13742805 -106541507 + AT_rich Low_complexity Low_complexity 1 45 0 5 689 518 260 39 58 chr13 13743123 13743331 -106540981 - RLTR42-int LTR ERVK -4155 1367 1164 5 689 270 81 0 0 chr13 13744143 13744180 -106540132 + (T)n Simple_repeat Simple_repeat 1 37 0 5 689 1133 88 0 0 chr13 13744180 13744327 -106539985 - B1_Mus1 SINE Alu 0 148 2 5 689 1034 287 74 13 chr13 13744395 13744706 -106539606 + MER2 DNA MER2_type 15 344 -1 5 689 6898 38 0 0 chr13 13744868 13745690 -106538622 + L1Md_T LINE L1 5761 6582 0 5 689 1326 245 74 16 chr13 13745922 13746299 -106538013 - MTD LTR MaLR -20 399 1 5 689 181 371 29 0 chr13 13746448 13746518 -106537794 - MIRb SINE MIR -36 232 161 5 689 250 303 0 110 chr13 13747481 13747497 -106536815 + MT2B2 LTR ERVL 152 156 -428 6 689 551 293 17 0 chr13 13747497 13747613 -106536699 + PB1D7 SINE Alu 2 119 -1 6 689 1119 54 7 0 chr13 13747739 13747888 -106536424 + L1_Mus2 LINE L1 6416 6565 -1 6 689 187 116 45 23 chr13 13748048 13748092 -106536220 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 6 689 461 367 53 13 chr13 13748099 13748251 -106536061 + RSINE1 SINE B4 2 159 -6 6 689 729 252 83 29 chr13 13749547 13749751 -106534561 - B3 SINE B2 -1 215 1 6 689 1035 122 7 0 chr13 13749976 13750123 -106534189 + B1_Mus1 SINE Alu 1 148 0 6 689 877 185 118 0 chr13 13750184 13750362 -106533950 + B3 SINE B2 6 204 -12 6 689 180 0 0 0 chr13 13750362 13750382 -106533930 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 6 689 1233 57 0 0 chr13 13750625 13750783 -106533529 + (CA)n Simple_repeat Simple_repeat 1 158 0 6 689 1100 75 0 0 chr13 13751368 13751527 -106532785 + L1Md_F2 LINE L1 6419 6577 -5 6 689 1925 231 40 72 chr13 13752190 13752693 -106531619 - Lx6 LINE L1 -15 7445 6959 6 689 40 0 0 0 chr13 13753078 13753118 -106531194 + AT_rich Low_complexity Low_complexity 1 40 0 6 689 1212 28 14 0 chr13 13753778 13753922 -106530390 - B1_Mus2 SINE Alu 0 147 2 6 689 545 232 39 13 chr13 13753934 13754105 -106530207 - B3A SINE B2 -9 186 6 6 689 1317 86 21 16 chr13 13754527 13754716 -106529596 - B2_Mm2 SINE B2 -5 190 1 6 689 810 222 67 0 chr13 13755496 13755690 -106528622 - Lx6 LINE L1 -26 7434 7228 6 689 921 244 10 10 chr13 13755689 13755892 -106528420 + Lx6 LINE L1 7011 7213 -247 6 689 29 28 0 0 chr13 13756051 13756087 -106528225 + AT_rich Low_complexity Low_complexity 1 36 0 6 689 791 224 177 12 chr13 13756797 13757046 -106527266 - B4A SINE B4 -1 291 2 6 689 342 258 15 38 chr13 13757078 13757211 -106527101 - Lx8 LINE L1 -10 7463 7334 6 689 457 54 0 0 chr13 13758793 13758849 -106525463 - L1_Mm LINE L1 -1146 4737 4682 6 689 9888 172 48 14 chr13 13758858 13761354 -106522958 - Lx6 LINE L1 -8 7452 3907 6 689 440 152 0 11 chr13 13761354 13761447 -106522865 - Lx6 LINE L1 -3731 2149 2058 6 689 498 181 0 0 chr13 13761447 13761552 -106522760 + (TGG)n Simple_repeat Simple_repeat 3 107 0 6 689 307 320 100 15 chr13 13761553 13761753 -106522559 - HAL1-2a_MD LINE L1 -516 2508 2292 6 690 306 240 87 0 chr13 13762654 13762758 -106521554 + Lx8 LINE L1 7352 7464 -9 6 690 1322 124 305 16 chr13 13763862 13764167 -106520145 - RLTR9E LTR ERVK 0 393 1 6 690 481 285 65 8 chr13 13765291 13765415 -106518897 + RSINE1 SINE B4 7 137 -28 6 690 782 225 57 73 chr13 13766061 13766253 -106518059 + B3A SINE B2 7 195 -3 6 690 441 0 0 0 chr13 13766885 13766934 -106517378 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 690 1330 89 10 30 chr13 13767536 13767733 -106516579 - B2_Mm1t SINE B2 0 193 1 6 690 1300 118 19 0 chr13 13767773 13767984 -106516328 + L1_Mur2 LINE L1 4994 5208 -669 6 690 355 343 16 69 chr13 13768271 13768459 -106515853 - MER5A DNA MER1_type -3 186 9 6 690 331 330 65 57 chr13 13768621 13768868 -106515444 - MIRb SINE MIR 0 268 20 6 690 702 71 0 0 chr13 13769771 13769870 -106514442 - MusHAL1 LINE L1 -632 2080 1982 6 690 832 285 27 8 chr13 13770731 13770993 -106513319 - Lx8 LINE L1 -98 7375 7109 6 690 955 252 19 10 chr13 13771524 13771732 -106512580 + B3 SINE B2 2 211 -5 6 690 191 296 111 14 chr13 13771931 13772003 -106512309 + L2b LINE L2 3110 3188 -187 6 690 192 158 0 0 chr13 13772022 13772060 -106512252 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 690 530 141 78 39 chr13 13775871 13775974 -106508338 + ID_B1 SINE B4 117 223 -1 6 690 463 234 25 75 chr13 13776460 13776580 -106507732 + B1_Mur2 SINE Alu 2 115 -34 6 690 1112 120 5 43 chr13 13776590 13776799 -106507513 + Lx LINE L1 6453 6653 -1 6 690 24 0 0 0 chr13 13776801 13776825 -106507487 + AT_rich Low_complexity Low_complexity 1 24 0 6 690 186 317 78 67 chr13 13776904 13777097 -106507215 - L2 LINE L2 -559 2860 2666 6 690 249 174 43 0 chr13 13777933 13778002 -106506310 + GA-rich Low_complexity Low_complexity 2 73 0 6 690 198 292 30 30 chr13 13778617 13778684 -106505628 - MIRc SINE MIR -88 180 114 6 690 3619 73 0 18 chr13 13780152 13780643 -106503669 - L1Md_F2 LINE L1 -2 6580 6099 6 690 30698 63 4 3 chr13 13780644 13781740 -106502572 - L1Md_F LINE L1 -168 5715 4611 6 690 3592 8 2 0 chr13 13781740 13782135 -106502177 - MTA_Mm LTR MaLR 0 396 1 6 690 30698 63 4 3 chr13 13782135 13785284 -106499028 - L1Md_F LINE L1 -1273 4610 1466 6 690 818 152 0 0 chr13 13785283 13785428 -106498884 - L1Md_F LINE L1 -6337 279 135 6 690 601 286 108 4 chr13 13785579 13785856 -106498456 - L1MD1 LINE L1 -16 6226 5921 6 690 333 305 48 28 chr13 13785859 13785970 -106498342 + PB1 SINE Alu 1 112 -5 6 690 686 250 0 0 chr13 13785973 13786109 -106498203 + B1_Mur1 SINE Alu 1 136 -13 6 690 861 274 85 47 chr13 13786156 13786601 -106497711 - L1MD1 LINE L1 -360 5882 5421 6 690 282 206 0 0 chr13 13786846 13786909 -106497403 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 690 304 196 42 32 chr13 13786955 13787050 -106497262 + L1MA9 LINE L1 6216 6311 -1 6 690 304 175 53 0 chr13 13787080 13787137 -106497175 + B3A SINE B2 1 60 -138 6 690 233 176 391 23 chr13 13787385 13787472 -106496840 - PB1D9 SINE Alu 0 120 2 6 690 3807 253 98 25 chr13 13787494 13788714 -106495598 - Lx9 LINE L1 -15 7629 6321 6 690 438 335 10 18 chr13 13789174 13789316 -106494996 - PB1D10 SINE Alu -1 148 2 6 690 366 288 63 38 chr13 13790309 13790468 -106493844 + RSINE1 SINE B4 3 165 0 6 690 372 133 0 0 chr13 13790486 13790546 -106493766 + (CTA)n Simple_repeat Simple_repeat 1 60 0 6 690 270 243 9 18 chr13 13791091 13791200 -106493112 - Lx9 LINE L1 -53 7591 7484 6 690 1373 130 0 5 chr13 13791551 13791775 -106492537 - Lx2 LINE L1 0 6997 6775 6 690 6719 114 24 5 chr13 13791773 13792865 -106491447 - Lx2 LINE L1 -352 6645 5533 6 690 13606 80 22 9 chr13 13792862 13795465 -106488847 - L1VL4 LINE L1 -672 2887 244 6 690 6784 63 27 21 chr13 13796762 13797375 -106486937 - L1_Mus2 LINE L1 0 6566 5940 6 690 1029 75 30 0 chr13 13797375 13797509 -106486803 + B1_Mus1 SINE Alu 2 139 -9 6 690 186 43 0 0 chr13 13797509 13797532 -106486780 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 6 690 6784 80 27 13 chr13 13797532 13798487 -106485825 - L1_Mus2 LINE L1 -627 5939 4976 6 690 50 51 0 0 chr13 13798639 13798717 -106485595 + AT_rich Low_complexity Low_complexity 1 78 0 6 690 337 241 24 0 chr13 13799259 13799342 -106484970 - B3 SINE B2 -104 112 28 6 690 520 280 203 5 chr13 13799647 13799834 -106484478 + ID_B1 SINE B4 1 224 0 6 690 250 254 0 14 chr13 13800075 13800147 -106484165 + (TATG)n Simple_repeat Simple_repeat 4 74 0 6 690 322 217 14 0 chr13 13800151 13800220 -106484092 - ID4 SINE ID -11 72 3 6 690 1245 109 11 26 chr13 13800565 13800754 -106483558 - B2_Mm1t SINE B2 -6 187 2 6 690 745 244 24 19 chr13 13801013 13801218 -106483094 + B3 SINE B2 1 206 -10 6 690 195 252 77 48 chr13 13802166 13802270 -106482042 + MIR SINE MIR 98 204 -58 6 690 949 145 44 6 chr13 13802327 13802507 -106481805 - B2_Mm2 SINE B2 -8 187 1 6 690 184 179 0 43 chr13 13802600 13802670 -106481642 + A-rich Low_complexity Low_complexity 2 68 0 6 690 480 213 239 5 chr13 13803199 13803383 -106480929 - Tigger7 DNA MER2_type -41 2450 2224 6 690 456 309 51 17 chr13 13803370 13803548 -106480764 - Tigger7 DNA MER2_type -2081 410 227 6 690 2086 104 32 18 chr13 13804278 13804619 -106479693 - L1_Mus4 LINE L1 -1 6635 6290 6 690 198 0 0 0 chr13 13804871 13804893 -106479419 + (T)n Simple_repeat Simple_repeat 1 22 0 6 690 37307 31 0 0 chr13 13805273 13810682 -106473630 - L1Md_T LINE L1 -1 6581 1170 6 690 4237 149 29 35 chr13 13810688 13811593 -106472719 - L1Md_T LINE L1 -5411 1205 307 6 690 6500 17 1 49 chr13 13811594 13812465 -106471847 - L1Md_A LINE L1 -5457 1267 439 6 690 4057 159 83 31 chr13 13812460 13814002 -106470310 - L1Md_Gf LINE L1 -4115 1771 220 6 690 6980 68 2 38 chr13 13814021 13814825 -106469487 - L1_Mus2 LINE L1 -1 6565 5797 6 690 1115 82 0 7 chr13 13814825 13814972 -106469340 - B1_Mus2 SINE Alu -1 146 1 6 690 6980 79 1 59 chr13 13814972 13815411 -106468901 - L1_Mus2 LINE L1 -87 5796 5366 6 690 496 315 328 20 chr13 13815906 13816603 -106467709 + L2a LINE L2 2294 3205 -221 6 690 1755 149 56 83 chr13 13816615 13817010 -106467302 - ORR1C2 LTR MaLR 0 384 1 6 690 399 211 13 0 chr13 13817484 13817560 -106466752 + ID4_ SINE ID 1 77 -6 6 690 23 0 0 0 chr13 13817760 13817783 -106466529 + AT_rich Low_complexity Low_complexity 1 23 0 6 690 182 204 45 0 chr13 13817886 13817930 -106466382 + MIR SINE MIR 2 47 -215 6 690 529 134 134 0 chr13 13818342 13818454 -106465858 + RLTR28 LTR ERVL 398 524 0 6 690 21 36 0 0 chr13 13818577 13818605 -106465707 + AT_rich Low_complexity Low_complexity 1 28 0 6 690 307 339 69 23 chr13 13818785 13818915 -106465397 + L1M5 LINE L1 5526 5661 -463 6 690 261 267 67 0 chr13 13819185 13819245 -106465067 + RSINE1 SINE B4 45 108 -57 6 690 1217 61 0 0 chr13 13819305 13819452 -106464860 + B1_Mm SINE Alu 1 147 0 6 690 655 281 7 0 chr13 13819629 13819768 -106464544 - B1_Mur1 SINE Alu -1 148 9 6 690 650 159 0 9 chr13 13819838 13819952 -106464360 - BC1_Mm scRNA scRNA -39 113 1 6 690 244 273 0 18 chr13 13819912 13819968 -106464344 - ZP3AR Satellite Satellite -130 82 28 6 690 501 263 80 29 chr13 13820177 13820314 -106463998 + B1F SINE Alu 6 149 0 6 690 997 130 62 0 chr13 13821288 13821450 -106462862 + RLTR28B LTR ERVL 1 172 -309 6 690 356 155 14 0 chr13 13821450 13821521 -106462791 + (TATG)n Simple_repeat Simple_repeat 2 73 0 6 690 566 136 22 11 chr13 13821816 13821905 -106462407 + B1_Mur4 SINE Alu 60 149 -1 6 690 777 51 0 0 chr13 13821905 13822003 -106462309 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 7 690 22 0 0 0 chr13 13822966 13822988 -106461324 + AT_rich Low_complexity Low_complexity 1 22 0 7 690 383 226 106 12 chr13 13823039 13823124 -106461188 - PB1D9 SINE Alu -27 93 1 7 690 717 236 89 41 chr13 13823634 13823903 -106460409 - B4A SINE B4 -6 286 5 7 690 414 0 0 0 chr13 13824089 13824135 -106460177 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 690 8168 118 32 11 chr13 13824281 13825206 -106459106 - Lx3A LINE L1 -7 6974 6044 7 690 216 0 0 0 chr13 13825206 13825230 -106459082 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 7 690 31366 73 26 3 chr13 13825230 13828301 -106456011 - Lx3A LINE L1 -938 6043 2896 7 690 342 0 0 0 chr13 13828301 13828339 -106455973 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 7 690 31366 85 26 5 chr13 13828339 13830467 -106453845 - Lx3A LINE L1 -2991 2895 676 7 690 389 271 0 0 chr13 13830468 13830575 -106453737 - Lx3A LINE L1 -6667 317 211 7 690 442 304 72 0 chr13 13830770 13830895 -106453417 - ID_B1 SINE B4 -2 222 89 7 690 391 305 11 0 chr13 13831025 13831120 -106453192 - MER20 DNA MER1_type 0 219 124 7 690 505 306 77 40 chr13 13832118 13832390 -106451922 - B4A SINE B4 -9 283 2 7 690 24 53 0 0 chr13 13833082 13833120 -106451192 + AT_rich Low_complexity Low_complexity 1 38 0 7 690 238 226 0 0 chr13 13833845 13833898 -106450414 - MLT1G3 LTR MaLR -13 535 483 7 690 373 286 11 66 chr13 13833991 13834158 -106450154 - MLT1G3 LTR MaLR -308 287 133 7 690 959 185 39 0 chr13 13834309 13834487 -106449825 - B3 SINE B2 -5 211 27 7 690 922 144 0 0 chr13 13834519 13834658 -106449654 - B1_Mus2 SINE Alu 0 147 9 7 690 219 175 0 0 chr13 13834671 13834711 -106449601 - B3 SINE B2 -176 40 1 7 690 930 323 131 14 chr13 13835916 13836412 -106447900 - MER68 LTR ERVL -6 557 4 7 690 280 265 103 27 chr13 13837440 13837604 -106446708 - MER34A1 LTR ERV1 -4 583 370 7 690 226 197 16 47 chr13 13839093 13839157 -106445155 - L2c LINE L2 -8 3379 3318 7 690 278 228 14 52 chr13 13840187 13840285 -106444027 - B1F SINE Alu 0 149 31 7 690 454 302 180 17 chr13 13840368 13840718 -106443594 + L2a LINE L2 3016 3422 -4 7 690 7735 152 108 17 chr13 13840793 13842483 -106441829 - RLTR22_Mur LTR ERVK -5 1843 1 7 690 816 42 66 16 chr13 13842680 13842802 -106441510 - B1_Mm SINE Alu 0 147 20 7 690 312 103 0 17 chr13 13842802 13842861 -106441451 + L1Md_F3 LINE L1 6522 6579 -5 7 690 332 315 51 56 chr13 13847822 13848037 -106436275 + MIRb SINE MIR 37 250 -18 7 690 1164 74 0 13 chr13 13848129 13848279 -106436033 + B1_Mus1 SINE Alu 1 148 0 7 690 207 0 0 0 chr13 13849762 13849785 -106434527 + (GGAA)n Simple_repeat Simple_repeat 2 24 0 7 690 246 309 124 0 chr13 13851136 13851233 -106433079 + PB1D10 SINE Alu 1 109 -8 7 690 210 37 0 0 chr13 13851935 13851962 -106432350 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 7 690 394 261 36 138 chr13 13852040 13852178 -106432134 - RSINE1 SINE B4 -25 140 17 7 690 1397 228 95 12 chr13 13853808 13854146 -106430166 - MTE2b LTR MaLR -13 366 1 7 690 205 49 71 24 chr13 13854645 13854687 -106429625 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 7 690 34 24 0 0 chr13 13854693 13854734 -106429578 + AT_rich Low_complexity Low_complexity 1 41 0 7 690 420 240 10 0 chr13 13855261 13855357 -106428955 - B1F SINE Alu -52 97 1 7 690 554 279 136 0 chr13 13856598 13856752 -106427560 + B3A SINE B2 2 176 -22 7 690 1594 188 138 169 chr13 13857121 13857853 -106426459 - Lx7 LINE L1 0 7696 6988 7 690 23 33 0 0 chr13 13857886 13857916 -106426396 + AT_rich Low_complexity Low_complexity 1 30 0 7 690 21 57 0 0 chr13 13858266 13858301 -106426011 + AT_rich Low_complexity Low_complexity 1 35 0 7 690 14020 74 34 5 chr13 13858459 13861088 -106423224 - L1VL2 LINE L1 -626 2989 284 7 690 2899 183 39 33 chr13 13861086 13861658 -106422654 - Lx7 LINE L1 -691 7005 6431 7 690 20987 9 0 0 chr13 13861669 13864694 -106419618 - L1Md_A LINE L1 0 6582 3558 7 690 10179 16 1 26 chr13 13864693 13866169 -106418143 - L1Md_A LINE L1 -4297 1586 153 7 690 480 147 0 0 chr13 13866168 13866236 -106418076 - Lx7 LINE L1 -1251 6445 6378 7 690 665 247 133 68 chr13 13866373 13866712 -106417600 - MTE2a LTR MaLR -1 378 18 7 690 390 167 0 0 chr13 13866730 13866802 -106417510 - B4A SINE B4 -220 72 1 7 690 430 270 54 0 chr13 13866972 13867083 -106417229 - PB1D10 SINE Alu 0 117 1 7 690 755 286 51 26 chr13 13867126 13867399 -106416913 - B4A SINE B4 -12 280 1 7 690 468 0 0 0 chr13 13868185 13868237 -106416075 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 690 23 54 0 0 chr13 13868733 13868770 -106415542 + AT_rich Low_complexity Low_complexity 1 37 0 7 690 662 158 105 0 chr13 13868889 13869022 -106415290 + B1_Mur3 SINE Alu 3 149 0 7 690 482 292 6 38 chr13 13871222 13871382 -106412930 + RMER15-int LTR ERVL 3232 3386 -1613 7 690 704 267 97 0 chr13 13871413 13871619 -106412693 + RMER15-int LTR ERVL 3469 3694 -1305 7 690 231 163 47 0 chr13 13871694 13871737 -106412575 + CT-rich Low_complexity Low_complexity 1 45 0 7 690 2484 300 73 25 chr13 13871762 13872702 -106411610 + Lx8 LINE L1 6237 7222 -251 7 690 254 267 66 13 chr13 13872858 13872934 -106411378 + Lx8 LINE L1 7144 7223 -250 7 690 372 234 109 7 chr13 13873004 13873142 -106411170 + RMER15 LTR ERVL 424 575 0 7 690 189 0 0 0 chr13 13874535 13874556 -106409756 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 7 690 563 120 0 0 chr13 13878729 13878821 -106405491 - B1_Mus1 SINE Alu -55 93 2 7 690 552 247 43 137 chr13 13881618 13881829 -106402483 + 7SK RNA RNA 50 240 -91 7 690 627 163 99 21 chr13 13882189 13882366 -106401946 + B3 SINE B2 3 184 -9 7 690 261 279 59 0 chr13 13885015 13885083 -106399229 + Tigger7 DNA MER2_type 225 296 -2195 7 690 248 263 157 69 chr13 13885103 13885205 -106399107 + Tigger7 DNA MER2_type 2373 2483 -8 7 690 427 267 49 16 chr13 13885360 13885482 -106398830 - MER57E1 LTR ERV1 -211 161 36 7 690 479 229 96 5 chr13 13885520 13885654 -106398658 + L1MC2 LINE L1 5831 5970 -374 7 690 416 252 97 45 chr13 13885654 13885808 -106398504 + RSINE1 SINE B4 2 163 -2 7 690 466 276 151 103 chr13 13885808 13886118 -106398194 + L1MC2 LINE L1 5969 6296 -37 7 690 397 270 26 51 chr13 13886119 13886236 -106398076 + ID_B1 SINE B4 68 181 -43 7 690 472 326 33 6 chr13 13886280 13886462 -106397850 + ID_B1 SINE B4 4 190 -34 7 690 555 66 0 0 chr13 13886474 13886550 -106397762 + (TC)n Simple_repeat Simple_repeat 1 76 0 7 690 2300 185 38 29 chr13 13887674 13888196 -106396116 + RLTR11A LTR ERVK 2 528 0 7 690 238 273 125 18 chr13 13888760 13888872 -106395440 + L1MEf LINE L1 414 537 -5705 7 690 746 249 139 47 chr13 13888975 13889400 -106394912 + L1MEf LINE L1 2872 3335 -2811 7 690 548 228 8 42 chr13 13889430 13889549 -106394763 + RSINE1 SINE B4 8 122 -43 7 690 299 348 67 16 chr13 13889644 13889898 -106394414 + L1MEf LINE L1 3423 3689 -2457 7 690 216 268 117 85 chr13 13889924 13889982 -106394330 + PB1D10 SINE Alu 10 75 -42 7 690 2213 102 150 6 chr13 13889982 13890336 -106393976 - RLTR44A LTR ERVK 0 405 1 7 690 216 268 117 85 chr13 13890336 13890371 -106393941 + PB1D10 SINE Alu 76 106 -11 7 690 701 291 100 56 chr13 13890791 13891221 -106393091 - MLT1D LTR MaLR -56 449 1 7 690 413 309 27 7 chr13 13891221 13891371 -106392941 - LTR87 LTR ERVL? -77 547 395 7 690 1026 233 67 34 chr13 13891738 13892036 -106392276 + Lx8 LINE L1 7147 7454 -19 7 690 222 164 0 0 chr13 13892242 13892297 -106392015 + (TCTCTG)n Simple_repeat Simple_repeat 2 56 0 7 690 210 250 161 11 chr13 13892326 13892419 -106391893 - PB1D7 SINE Alu -12 108 2 7 690 279 0 0 0 chr13 13892771 13892802 -106391510 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 7 691 970 195 5 0 chr13 13893853 13894038 -106390274 + B3 SINE B2 1 186 -30 7 691 777 240 14 52 chr13 13894312 13894523 -106389789 + B3 SINE B2 2 204 -12 7 691 231 219 90 45 chr13 13894835 13894902 -106389410 + Tigger7 DNA MER2_type 232 301 -2190 7 691 448 160 10 10 chr13 13894940 13895041 -106389271 + (TA)n Simple_repeat Simple_repeat 1 101 0 7 691 948 195 43 0 chr13 13895201 13895386 -106388926 - B3 SINE B2 -1 215 23 7 691 414 0 0 0 chr13 13895413 13895459 -106388853 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 691 450 275 20 26 chr13 13896689 13896842 -106387470 + RMER15 LTR ERVL 353 504 -71 7 691 405 0 0 0 chr13 13897176 13897221 -106387091 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 691 3403 67 2 2 chr13 13897423 13897856 -106386456 - L1_Mus2 LINE L1 0 6566 6134 7 691 432 0 0 0 chr13 13898977 13899025 -106385287 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 691 644 223 204 61 chr13 13899106 13899435 -106384877 - MTEa LTR MaLR -1 378 3 7 691 695 169 7 7 chr13 13899537 13899680 -106384632 + URR1B DNA MER1_type 83 225 0 7 691 378 0 0 0 chr13 13900070 13900112 -106384200 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 691 377 291 17 8 chr13 13900117 13900235 -106384077 - RSINE1 SINE B4 -44 121 3 7 691 522 276 0 14 chr13 13900265 13900412 -106383900 - B1F SINE Alu 0 149 5 7 691 474 268 50 7 chr13 13901552 13901691 -106382621 - ID_B1 SINE B4 -7 217 73 7 691 308 285 201 25 chr13 13901691 13901965 -106382347 - L1MB3 LINE L1 -17 6166 5845 7 691 695 308 172 29 chr13 13902585 13903027 -106381285 - MER21B LTR ERV1 -334 529 25 7 691 363 178 87 71 chr13 13903817 13903944 -106380368 + B1F SINE Alu 19 147 -2 7 691 217 281 110 0 chr13 13904460 13904542 -106379770 + PB1D10 SINE Alu 27 117 0 7 691 358 341 60 30 chr13 13905221 13905354 -106378958 - MLT1N2 LTR MaLR -337 225 89 7 691 2091 233 127 57 chr13 13905732 13906596 -106377716 + L1MC LINE L1 4400 5327 -1006 7 691 378 302 63 8 chr13 13906596 13906723 -106377589 + ID_B1 SINE B4 80 213 -11 7 691 292 308 56 0 chr13 13906627 13906734 -106377578 + B1F SINE Alu 37 149 0 7 691 257 254 107 53 chr13 13906789 13906864 -106377448 + B4 SINE B4 8 86 -206 7 691 697 268 67 5 chr13 13906886 13907081 -106377231 + B4 SINE B4 80 286 -6 7 691 429 224 53 46 chr13 13907233 13907364 -106376948 - L1MC LINE L1 -2217 3929 3798 7 691 324 283 28 9 chr13 13907432 13907539 -106376773 + MTEb LTR MaLR 26 134 -225 7 691 326 242 26 0 chr13 13907622 13907714 -106376598 + MTEb LTR MaLR 278 372 -7 7 691 339 150 0 0 chr13 13908329 13908389 -106375923 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 691 387 319 6 47 chr13 13908500 13908671 -106375641 - B4A SINE B4 -128 164 1 8 691 932 103 6 0 chr13 13908695 13908869 -106375443 + (TC)n Simple_repeat Simple_repeat 2 176 0 8 691 405 0 0 0 chr13 13908869 13908913 -106375399 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 691 471 186 65 26 chr13 13909223 13909369 -106374943 + B1F2 SINE Alu 5 149 0 8 691 861 260 10 5 chr13 13909394 13909591 -106374721 - B3A SINE B2 0 198 1 8 691 340 243 65 37 chr13 13909605 13909712 -106374600 + PB1D10 SINE Alu 1 110 -7 8 691 279 0 0 0 chr13 13910796 13910827 -106373485 + (T)n Simple_repeat Simple_repeat 1 31 0 8 691 3510 23 2 0 chr13 13911343 13911738 -106372574 + MTA_Mm LTR MaLR 1 396 0 8 691 287 250 0 0 chr13 13911784 13911840 -106372472 - PB1D10 SINE Alu -61 56 1 8 691 1096 259 91 9 chr13 13913215 13913534 -106370778 - MTEa LTR MaLR 0 379 35 8 691 256 272 12 24 chr13 13914016 13914099 -106370213 + GA-rich Low_complexity Low_complexity 2 83 0 8 691 462 36 0 0 chr13 13914826 13914882 -106369430 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 691 1078 49 0 0 chr13 13915479 13915621 -106368691 - B1_Mus2 SINE Alu 0 147 6 8 691 244 239 0 25 chr13 13915519 13915639 -106368673 - ORR1B1-int LTR MaLR -755 754 638 8 691 792 140 29 7 chr13 13916457 13916594 -106367718 + MT2A LTR ERVL 25 164 -369 8 691 421 338 7 52 chr13 13916760 13916913 -106367399 + RSINE1 SINE B4 3 148 -17 8 691 325 272 68 9 chr13 13919693 13919840 -106364472 + L1ME3A LINE L1 5642 5798 -364 8 691 597 184 125 0 chr13 13920004 13920140 -106364172 + L1ME3A LINE L1 6008 6160 -13 8 691 1260 314 101 35 chr13 13921682 13921782 -106362530 - Lx9 LINE L1 -12 7461 7345 8 691 512 36 48 0 chr13 13921782 13921865 -106362447 + (TAGA)n Simple_repeat Simple_repeat 3 89 0 8 691 1795 287 60 34 chr13 13921865 13922557 -106361755 - Lx9 LINE L1 -182 7462 6673 8 691 1086 272 11 31 chr13 13922649 13922939 -106361373 + B4 SINE B4 2 285 -7 8 691 233 246 18 0 chr13 13922946 13923003 -106361309 + (CATA)n Simple_repeat Simple_repeat 1 58 0 8 691 265 286 11 35 chr13 13923714 13923801 -106360511 + ID SINE ID 1 85 -139 8 691 228 86 0 0 chr13 13923966 13924001 -106360311 + (CCCCCA)n Simple_repeat Simple_repeat 5 39 0 8 691 247 284 0 0 chr13 13925009 13925076 -106359236 - MLT1A LTR MaLR -252 122 56 8 691 276 336 0 26 chr13 13925304 13925417 -106358895 + GA-rich Low_complexity Low_complexity 4 113 0 8 691 358 275 45 9 chr13 13925419 13925529 -106358783 + PB1D7 SINE Alu 2 115 -5 8 691 311 260 28 28 chr13 13925553 13925660 -106358652 + MLT1B LTR MaLR 94 200 -190 8 691 801 304 9 0 chr13 13926640 13926860 -106357452 + ID_B1 SINE B4 2 223 -1 8 691 1616 32 21 0 chr13 13926976 13927165 -106357147 - B2_Mm1t SINE B2 0 193 1 8 691 816 229 106 0 chr13 13927522 13927710 -106356602 + B3 SINE B2 3 210 -6 8 691 2643 69 10 13 chr13 13928041 13928425 -106355887 - MTB LTR MaLR 0 400 18 8 691 2335 121 20 23 chr13 13928440 13928837 -106355475 - RLTR9D LTR ERVK -5 398 3 8 691 440 122 27 13 chr13 13928839 13928914 -106355398 - ETnERV2-int LTR ERVK 0 7406 7331 8 691 3931 157 20 18 chr13 13929124 13929950 -106354362 - ETnERV2-int LTR ERVK -1179 6227 5646 8 691 3967 164 36 23 chr13 13929966 13930974 -106353338 - ETnERV2-int LTR ERVK -3308 4098 2396 8 691 5825 113 34 13 chr13 13931297 13932249 -106352063 - ETnERV2-int LTR ERVK -3958 3448 1995 8 691 5774 105 73 24 chr13 13932274 13933231 -106351081 - ETnERV2-int LTR ERVK -5321 2085 1082 8 691 486 0 0 0 chr13 13933231 13933285 -106351027 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 8 691 3159 221 63 85 chr13 13933285 13933614 -106350698 - ETnERV2-int LTR ERVK -2991 323 3 8 691 2520 125 19 46 chr13 13933626 13934036 -106350276 - RLTR9D LTR ERVK -4 399 1 8 691 4655 142 141 43 chr13 13934995 13935927 -106348385 + RLTR13D2 LTR ERVK 1 1023 0 8 691 30 0 0 0 chr13 13936634 13936664 -106347648 + AT_rich Low_complexity Low_complexity 1 30 0 8 691 309 211 65 60 chr13 13937006 13937158 -106347154 + L1MA4A LINE L1 5814 5968 -212 8 691 2134 147 14 79 chr13 13937161 13937581 -106346731 - RLTR9C LTR ERVK 0 393 1 8 691 2786 82 287 0 chr13 13937642 13938095 -106346217 + MT2B2 LTR ERVL 2 584 0 8 691 22 0 0 0 chr13 13938634 13938656 -106345656 + AT_rich Low_complexity Low_complexity 1 22 0 8 691 366 191 10 69 chr13 13938691 13938792 -106345520 - RMER12 LTR ERVK 0 1322 1228 8 691 766 80 176 0 chr13 13938841 13938966 -106345346 - B2_Mm2 SINE B2 -48 147 1 8 691 588 288 17 88 chr13 13938975 13939215 -106345097 - RMER12 LTR ERVK -142 1180 958 8 691 291 250 46 79 chr13 13939183 13939335 -106344977 - RMER12 LTR ERVK -535 787 641 8 691 3108 135 56 22 chr13 13939368 13939991 -106344321 - RMER12 LTR ERVK -411 911 268 8 691 298 239 0 15 chr13 13940291 13940359 -106343953 + MER20 DNA MER1_type 1 67 -152 8 691 512 313 41 48 chr13 13940395 13940687 -106343625 - B4A SINE B4 -2 290 1 8 691 248 308 85 46 chr13 13940689 13940842 -106343470 + MER20 DNA MER1_type 57 215 -4 8 691 614 49 0 12 chr13 13941072 13941155 -106343157 + (TG)n Simple_repeat Simple_repeat 2 83 0 8 691 3598 55 20 4 chr13 13941843 13942331 -106341981 - LTRIS2 LTR ERV1 0 564 69 8 691 392 275 192 78 chr13 13943272 13943813 -106340499 + RLTR40 LTR ERVK 50 754 -63 8 691 24 0 0 0 chr13 13944098 13944122 -106340190 + AT_rich Low_complexity Low_complexity 1 24 0 8 691 391 260 10 0 chr13 13944138 13944234 -106340078 + Tigger5 DNA MER2_type 35 131 -2275 8 691 581 315 63 67 chr13 13944572 13944827 -106339485 - ORR1E LTR MaLR -10 349 96 8 691 348 348 67 29 chr13 13945773 13945983 -106338329 - Tigger5 DNA MER2_type -2183 223 6 8 691 2630 35 0 0 chr13 13946297 13946586 -106337726 + L1_Mus1 LINE L1 6277 6565 -2 8 691 255 31 0 0 chr13 13946682 13946714 -106337598 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 8 691 440 116 0 11 chr13 13946914 13946981 -106337331 + (TC)n Simple_repeat Simple_repeat 2 68 0 8 691 284 0 28 0 chr13 13946981 13947017 -106337295 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 691 440 116 0 11 chr13 13947017 13947036 -106337276 + (TC)n Simple_repeat Simple_repeat 1 19 0 8 691 279 108 0 0 chr13 13947134 13947171 -106337141 + URR1B DNA MER1_type 1 37 -188 8 691 1269 156 5 5 chr13 13947171 13947377 -106336935 - URR1B DNA MER1_type 0 225 20 8 691 4351 107 64 23 chr13 13947462 13947583 -106336729 - Lx LINE L1 -2 6652 6535 8 691 180 0 0 0 chr13 13947583 13947603 -106336709 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 8 691 4351 107 64 23 chr13 13947603 13948140 -106336172 - Lx LINE L1 -120 6534 5969 8 691 200 128 26 0 chr13 13948797 13948836 -106335476 + A-rich Low_complexity Low_complexity 5 44 0 8 691 216 0 0 0 chr13 13950470 13950494 -106333818 + (T)n Simple_repeat Simple_repeat 1 24 0 8 691 34 24 0 0 chr13 13952508 13952549 -106331763 + AT_rich Low_complexity Low_complexity 1 41 0 8 691 527 98 31 70 chr13 13952619 13952886 -106331426 + (TTAGGG)n Simple_repeat Simple_repeat 1 256 0 8 691 1389 61 0 0 chr13 13952886 13953066 -106331246 + (TTGGGG)n Simple_repeat Simple_repeat 1 180 0 8 691 1410 60 4 9 chr13 13953066 13953273 -106331039 + (TTAGGG)n Simple_repeat Simple_repeat 1 206 0 8 691 277 183 0 19 chr13 13953313 13953419 -106330893 + (TTAGGG)n Simple_repeat Simple_repeat 5 108 0 8 691 289 261 22 0 chr13 13953441 13953533 -106330779 + (TTAGGG)n Simple_repeat Simple_repeat 5 98 0 8 691 413 192 8 0 chr13 13953548 13953668 -106330644 + (CTAGGG)n Simple_repeat Simple_repeat 5 125 0 8 691 1217 55 7 0 chr13 13953884 13954030 -106330282 + B1_Mus1 SINE Alu 2 148 0 8 691 1807 243 101 103 chr13 13954490 13955013 -106329299 - RMER17B LTR ERVK -9 899 370 8 691 612 40 0 0 chr13 13955013 13955088 -106329224 + (GA)n Simple_repeat Simple_repeat 2 76 0 8 691 1807 211 58 95 chr13 13955088 13955538 -106328774 - RMER17B LTR ERVK -519 439 1 8 691 592 188 17 0 chr13 13957089 13957265 -106327047 + (TTAGGG)n Simple_repeat Simple_repeat 2 180 0 8 691 282 212 0 0 chr13 13957304 13957403 -106326909 + (TTAGGG)n Simple_repeat Simple_repeat 2 100 0 8 691 539 211 0 6 chr13 13957408 13957580 -106326732 + (CTAGGG)n Simple_repeat Simple_repeat 3 173 0 8 691 440 228 7 0 chr13 13957655 13957800 -106326512 + (TTAGGG)n Simple_repeat Simple_repeat 4 149 0 8 691 1770 94 16 5 chr13 13958350 13958637 -106325675 - L1_Mus2 LINE L1 -575 6079 5784 8 691 288 279 0 11 chr13 13958668 13958755 -106325557 + CT-rich Low_complexity Low_complexity 1 86 0 8 691 261 0 0 0 chr13 13958755 13958784 -106325528 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 691 692 205 6 0 chr13 13959004 13959160 -106325152 + CT-rich Low_complexity Low_complexity 2 158 0 8 691 23 78 0 0 chr13 13959279 13959330 -106324982 + AT_rich Low_complexity Low_complexity 1 51 0 8 691 556 219 12 88 chr13 13959913 13960083 -106324229 - RLTR11A2 LTR ERVK 0 527 371 8 691 225 0 0 0 chr13 13960458 13960483 -106323829 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 691 507 236 15 73 chr13 13960507 13960644 -106323668 + B1_Mur3 SINE Alu 21 149 0 8 691 335 268 0 23 chr13 13960661 13960749 -106323563 - L1_Rod LINE L1 -1872 3975 3890 8 691 558 41 0 0 chr13 13960751 13960824 -106323488 + (TG)n Simple_repeat Simple_repeat 2 74 0 8 691 738 34 0 0 chr13 13960939 13961028 -106323284 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 8 691 209 191 0 0 chr13 13961072 13961114 -106323198 + CT-rich Low_complexity Low_complexity 1 42 0 8 691 184 154 19 19 chr13 13961126 13961179 -106323133 + (TCTCTG)n Simple_repeat Simple_repeat 6 58 0 8 691 510 17 0 0 chr13 13961258 13961317 -106322995 + (TC)n Simple_repeat Simple_repeat 2 60 0 8 691 387 0 0 0 chr13 13961317 13961359 -106322953 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 691 24 67 0 0 chr13 13961415 13961460 -106322852 + AT_rich Low_complexity Low_complexity 1 45 0 8 691 1320 60 0 0 chr13 13961460 13961626 -106322686 + B2_Mm1t SINE B2 2 167 -26 8 691 228 35 0 0 chr13 13961626 13961655 -106322657 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 8 691 732 186 43 80 chr13 13961663 13961850 -106322462 - B2_Mm2 SINE B2 -14 181 2 8 691 261 75 0 0 chr13 13961889 13961929 -106322383 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 691 258 32 0 0 chr13 13962008 13962039 -106322273 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 691 204 40 0 0 chr13 13962108 13962133 -106322179 + (CCA)n Simple_repeat Simple_repeat 1 25 0 8 691 405 0 0 0 chr13 13962219 13962264 -106322048 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 691 197 33 33 0 chr13 13962821 13962851 -106321461 + (CAAAA)n Simple_repeat Simple_repeat 1 31 0 8 691 478 254 74 37 chr13 13962883 13963018 -106321294 + B1_Mur2 SINE Alu 9 148 -1 8 691 21 0 0 0 chr13 13963210 13963231 -106321081 + AT_rich Low_complexity Low_complexity 1 21 0 8 691 24024 135 15 33 chr13 13963467 13968135 -106316177 - L1VL4 LINE L1 -563 5320 736 8 691 253 256 52 58 chr13 13971777 13971951 -106312361 - MERVL_2A-int LTR ERVL -1482 4003 3831 9 691 293 329 21 90 chr13 13971834 13972211 -106312101 - MYSERV6-int LTR ERVK -2963 5996 5646 9 691 317 319 25 25 chr13 13972713 13972835 -106311477 - MERVL_2A-int LTR ERVL -2589 3172 3051 9 691 38979 38 4 4 chr13 13975188 13981436 -106302876 - L1Md_T LINE L1 0 6585 241 9 691 24 0 0 0 chr13 13981479 13981503 -106302809 + AT_rich Low_complexity Low_complexity 1 24 0 9 691 486 0 0 0 chr13 13982084 13982138 -106302174 + (CA)n Simple_repeat Simple_repeat 2 55 0 9 691 475 118 0 23 chr13 13984971 13985058 -106299254 + (TC)n Simple_repeat Simple_repeat 2 86 0 9 691 27 0 0 0 chr13 13985922 13985949 -106298363 + AT_rich Low_complexity Low_complexity 1 27 0 9 691 289 260 38 38 chr13 13985959 13986039 -106298273 + ID4 SINE ID 2 81 -2 9 691 3430 176 56 21 chr13 13986342 13987122 -106297190 + RLTR13D3 LTR ERVK 1 1114 0 9 691 1150 75 0 27 chr13 13987833 13987848 -106296464 - B1_Mm SINE Alu 0 147 135 9 691 252 0 0 0 chr13 13987848 13987876 -106296436 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 9 691 1150 75 0 27 chr13 13987876 13988010 -106296302 - B1_Mm SINE Alu -13 134 2 9 691 35502 76 18 17 chr13 13988926 13994566 -106289746 + L1Md_F LINE L1 234 5874 -9 9 691 1018 201 15 26 chr13 13994571 13994836 -106289476 + L1VL1 LINE L1 34 295 -6127 9 691 27797 79 4 6 chr13 13994824 14000000 -106284312 + L1Md_F LINE L1 98 4851 -1032 9 691 5824 67 3 0 chr13 14000001 14000733 -106283579 + L1Md_F2 LINE L1 4853 5586 -297 1 691 8262 39 6 10 chr13 14000734 14001733 -106282579 + L1Md_F2 LINE L1 5588 6582 0 1 691 243 164 0 35 chr13 14001744 14001763 -106282549 + A-rich Low_complexity Low_complexity 1 18 0 2 691 5348 81 1 16 chr13 14001763 14002530 -106281782 + L1Md_F2 LINE L1 5864 6582 0 3 691 1096 52 0 0 chr13 14002789 14002924 -106281388 - B1_Mus1 SINE Alu -13 135 1 4 691 1157 72 0 0 chr13 14002985 14003124 -106281188 + B1_Mus1 SINE Alu 5 143 -5 5 691 411 226 28 28 chr13 14003221 14003330 -106280982 + Lx7 LINE L1 7252 7360 -336 6 691 2299 161 32 18 chr13 14003339 14003393 -106280919 - Lx4A LINE L1 -4 7054 7007 7 691 1097 168 140 122 chr13 14003393 14003488 -106280824 - RLTR9C LTR ERVK 0 393 294 8 691 594 0 0 0 chr13 14003488 14003554 -106280758 + (GA)n Simple_repeat Simple_repeat 1 66 0 9 691 1097 168 140 122 chr13 14003554 14003844 -106280468 - RLTR9C LTR ERVK -100 293 1 8 691 2299 161 32 18 chr13 14003844 14004225 -106280087 - Lx4A LINE L1 -52 7006 6613 7 691 3831 60 28 8 chr13 14004304 14004806 -106279506 + Lx3_Mus LINE L1 6498 7009 0 1 691 330 321 34 9 chr13 14005669 14005868 -106278444 + Lx7 LINE L1 5647 5884 -416 1 691 249 246 0 0 chr13 14006041 14006106 -106278206 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 691 285 98 0 0 chr13 14007429 14007470 -106276842 + (TTA)n Simple_repeat Simple_repeat 1 41 0 1 691 2455 228 21 28 chr13 14007470 14008051 -106276261 - Lx9 LINE L1 -699 6945 6369 1 691 240 196 18 18 chr13 14008291 14008348 -106275964 - B1F SINE Alu 0 149 93 1 691 487 326 44 99 chr13 14009025 14009522 -106274790 - RLTR12B LTR ERVK -12 516 47 1 691 1588 239 46 5 chr13 14009932 14010327 -106273985 + MTC LTR MaLR 3 413 -8 1 691 353 145 65 43 chr13 14011497 14011635 -106272677 - RLTR13D3 LTR ERVK -62 1052 983 1 691 259 247 148 0 chr13 14012305 14012386 -106271926 - RLTR13D3 LTR ERVK -1021 93 1 1 691 487 252 104 43 chr13 14012763 14012974 -106271338 + RMER21B LTR ERV1 1 224 -618 2 691 306 0 0 0 chr13 14013158 14013192 -106271120 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 691 458 259 37 78 chr13 14014440 14014708 -106269604 + Lx9 LINE L1 7388 7644 0 2 691 5653 64 9 8 chr13 14015657 14016398 -106267914 - Lx3_Mus LINE L1 0 7009 6268 2 691 544 273 14 14 chr13 14016540 14016681 -106267631 - RSINE1 SINE B4 0 165 25 2 691 791 150 14 14 chr13 14017082 14017224 -106267088 + B1_Mur4 SINE Alu 3 144 -6 2 691 473 307 69 46 chr13 14017367 14017541 -106266771 - B3 SINE B2 -38 178 1 2 691 433 284 0 9 chr13 14017579 14017689 -106266623 - RSINE1 SINE B4 -34 131 23 2 691 3433 68 5 0 chr13 14019527 14019955 -106264357 - L1_Mus1 LINE L1 -1 6566 6137 2 691 709 277 91 50 chr13 14022569 14022888 -106261424 + ORR1D2 LTR MaLR 6 337 -33 2 691 1065 233 115 76 chr13 14023639 14024047 -106260265 + RMER4B LTR ERVK 1 424 -161 3 691 260 253 36 12 chr13 14024075 14024159 -106260153 + MLT1H LTR MaLR 458 543 -6 3 692 28255 27 1 0 chr13 14026267 14030230 -106254082 - L1Md_T LINE L1 0 6582 2618 3 692 2167 98 3 9 chr13 14030230 14030560 -106253752 + IAPLTR1a_Mm LTR ERVK 1 328 -9 3 692 3548 94 17 21 chr13 14030568 14031385 -106252927 + IAPEz-int LTR ERVK 3 662 -5819 3 692 944 76 0 0 chr13 14031385 14031504 -106252808 + IAPEz-int LTR ERVK 1359 1477 -5004 3 692 1904 86 4 0 chr13 14031505 14031750 -106252562 + IAPEz-int LTR ERVK 2252 2497 -5183 3 692 15185 57 3 3 chr13 14031749 14033575 -106250737 + IAPEz-int LTR ERVK 4656 6481 0 3 692 2158 101 3 9 chr13 14033575 14033905 -106250407 + IAPLTR1a_Mm LTR ERVK 1 328 -9 3 692 11975 35 1 17 chr13 14033911 14036138 -106248174 - L1Md_A LINE L1 -3260 2623 438 3 692 14709 44 5 0 chr13 14036144 14038634 -106245678 - L1Md_F2 LINE L1 -12 6570 4068 3 692 15347 68 5 1 chr13 14038634 14040617 -106243695 - L1_Mm LINE L1 -579 5304 3314 3 692 298 297 84 39 chr13 14041071 14041225 -106243087 - L2a LINE L2 -2 3424 3264 3 692 289 259 25 107 chr13 14041382 14041466 -106242846 + PB1D10 SINE Alu 1 78 -39 3 692 3175 123 72 30 chr13 14041466 14042004 -106242308 - RLTR31_Mm LTR ERVK 0 561 1 4 692 289 259 25 107 chr13 14042004 14042040 -106242272 + PB1D10 SINE Alu 79 111 -6 3 692 489 76 0 0 chr13 14042052 14042118 -106242194 + (GGAA)n Simple_repeat Simple_repeat 2 67 0 4 692 249 392 10 19 chr13 14042476 14042580 -106241732 - LTR16A LTR ERVL -235 216 114 4 692 354 282 62 21 chr13 14042780 14042925 -106241387 + L2 LINE L2 2754 2904 -515 4 692 717 273 0 63 chr13 14043299 14043434 -106240878 - B3 SINE B2 -22 194 72 4 692 4128 78 35 47 chr13 14043434 14044028 -106240284 + LTRIS_Mus LTR ERV1 1 587 0 4 692 717 273 0 63 chr13 14044028 14044099 -106240213 - B3 SINE B2 -145 71 1 4 692 854 67 192 0 chr13 14044627 14044747 -106239565 + B1_Mus2 SINE Alu 1 143 -4 4 692 243 0 0 0 chr13 14044748 14044775 -106239537 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 692 346 248 27 116 chr13 14044992 14045138 -106239174 + MLT1F LTR MaLR 1 133 -415 4 692 584 223 171 9 chr13 14045140 14045362 -106238950 + MLT1F LTR MaLR 291 548 0 4 692 641 179 118 28 chr13 14045614 14045792 -106238520 + B3A SINE B2 1 194 -4 4 692 400 201 332 24 chr13 14045835 14045992 -106238320 + ID_B1 SINE B4 3 208 -16 5 692 376 310 28 129 chr13 14048837 14049015 -106235297 - RSINE1 SINE B4 0 165 6 5 692 184 304 28 56 chr13 14049218 14049326 -106234986 - L2a LINE L2 -217 3209 3105 5 692 1021 110 39 8 chr13 14049903 14050130 -106234182 - ORR1A2 LTR MaLR -7 319 1 5 692 9199 146 74 21 chr13 14050130 14051982 -106232330 - ORR1A2-int LTR MaLR 0 1963 14 5 692 2242 123 3 55 chr13 14051982 14052327 -106231985 - ORR1A2 LTR MaLR 0 327 1 5 692 188 0 0 69 chr13 14052504 14052533 -106231779 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 5 692 829 196 193 14 chr13 14053097 14053304 -106231008 + B4A SINE B4 1 244 -48 5 692 654 182 0 144 chr13 14053396 14053569 -106230743 - B1_Mur2 SINE Alu -1 148 1 5 692 641 233 16 0 chr13 14054700 14054829 -106229483 - B1_Mur4 SINE Alu -18 132 2 5 692 1266 101 21 21 chr13 14054839 14055032 -106229280 - B2_Mm2 SINE B2 -2 193 1 5 692 232 244 244 0 chr13 14055116 14055206 -106229106 + ID_B1 SINE B4 108 219 -5 5 692 24 0 0 0 chr13 14055482 14055506 -106228806 + AT_rich Low_complexity Low_complexity 1 24 0 6 692 42 48 0 0 chr13 14055872 14055935 -106228377 + AT_rich Low_complexity Low_complexity 1 63 0 6 692 197 156 22 22 chr13 14056369 14056415 -106227897 - MIR SINE MIR -120 142 97 6 692 440 289 0 43 chr13 14056419 14056560 -106227752 + ID_B1 SINE B4 82 216 -8 6 692 211 291 0 0 chr13 14056512 14056567 -106227745 + PB1 SINE Alu 73 127 0 6 692 398 96 0 10 chr13 14056684 14056753 -106227559 - B1_Mus2 SINE Alu -1 146 52 6 692 309 311 109 69 chr13 14059179 14059483 -106224829 + L2a LINE L2 2536 2851 -568 6 692 387 177 25 0 chr13 14059588 14059667 -106224645 + ID_B1 SINE B4 140 220 -4 6 692 204 275 250 20 chr13 14059938 14060142 -106224170 + L2a LINE L2 3006 3256 -170 6 692 709 262 11 11 chr13 14060791 14060980 -106223332 + B3A SINE B2 5 193 -5 6 692 552 280 71 30 chr13 14061373 14061642 -106222670 - MER63D DNA AcHobo -3 1058 779 6 692 750 251 17 11 chr13 14061667 14061844 -106222468 + B3 SINE B2 29 206 -10 7 692 262 261 45 0 chr13 14061868 14061956 -106222356 - MER63D DNA AcHobo -457 604 513 6 692 394 74 0 0 chr13 14061957 14062011 -106222301 + B1_Mus2 SINE Alu 1 54 -93 7 692 578 256 156 66 chr13 14062037 14062439 -106221873 - MER63D DNA AcHobo -548 513 69 6 692 4083 97 26 0 chr13 14063370 14063937 -106220375 - MT2B2 LTR ERVL -2 582 1 7 692 21 36 0 0 chr13 14064101 14064129 -106220183 + AT_rich Low_complexity Low_complexity 1 28 0 7 692 699 144 0 17 chr13 14064201 14064321 -106219991 + PB1D9 SINE Alu 2 119 -1 7 692 187 87 65 0 chr13 14065337 14065383 -106218929 + T-rich Low_complexity Low_complexity 2 50 0 7 692 1211 41 0 7 chr13 14065384 14065532 -106218780 - B1_Mm SINE Alu 0 147 1 7 692 207 0 0 0 chr13 14065606 14065629 -106218683 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 7 692 562 78 0 0 chr13 14065695 14065772 -106218540 - B2_Mm2 SINE B2 -115 80 4 7 692 252 0 0 0 chr13 14066009 14066037 -106218275 + (T)n Simple_repeat Simple_repeat 1 28 0 7 692 1076 75 0 52 chr13 14066037 14066192 -106218120 - B1_Mm SINE Alu 0 147 1 8 692 502 165 0 0 chr13 14066302 14066387 -106217925 - B1_Mur3 SINE Alu -1 148 64 8 692 252 306 0 40 chr13 14066453 14066528 -106217784 - ID4_ SINE ID -10 73 2 8 692 1107 103 48 120 chr13 14066658 14066759 -106217553 - B2_Mm2 SINE B2 0 195 101 8 692 1254 48 0 0 chr13 14066759 14066905 -106217407 + B1_Mus2 SINE Alu 2 147 0 8 692 1107 103 48 120 chr13 14066905 14067012 -106217300 - B2_Mm2 SINE B2 -95 100 2 8 692 718 285 199 26 chr13 14068097 14069063 -106215249 + L1MA5 LINE L1 4777 5919 -381 8 692 370 295 79 31 chr13 14069185 14069412 -106214900 - L1MEb LINE L1 -5511 559 322 8 692 293 246 15 136 chr13 14069666 14069698 -106214614 - PB1D10 SINE Alu 0 117 93 8 692 297 0 0 0 chr13 14069698 14069731 -106214581 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 8 692 293 246 15 136 chr13 14069731 14069830 -106214482 - PB1D10 SINE Alu -25 92 2 8 692 511 284 0 54 chr13 14069949 14070028 -106214284 + B1F2 SINE Alu 1 77 -72 8 692 4177 55 70 44 chr13 14070028 14070334 -106213978 + LTRIS_Mus LTR ERV1 1 328 -259 9 692 1559 32 27 0 chr13 14070334 14070522 -106213790 - B2_Mm1t SINE B2 0 193 1 9 692 1278 14 7 0 chr13 14070526 14070672 -106213640 - B1_Mus2 SINE Alu 0 147 1 9 692 4177 55 70 44 chr13 14070672 14070932 -106213380 + LTRIS_Mus LTR ERV1 329 587 0 9 692 511 284 0 54 chr13 14070932 14070982 -106213330 + B1F2 SINE Alu 78 122 -27 8 692 261 0 0 0 chr13 14071016 14071045 -106213267 + (TATG)n Simple_repeat Simple_repeat 2 30 0 9 692 890 254 90 80 chr13 14071047 14071140 -106213172 - Lx8 LINE L1 -147 7326 7235 9 692 1389 78 10 30 chr13 14071140 14071337 -106212975 + B2_Mm2 SINE B2 1 193 -2 9 692 890 254 90 80 chr13 14071337 14071555 -106212757 - Lx8 LINE L1 -239 7234 7012 9 692 331 325 8 26 chr13 14071588 14071705 -106212607 + PB1D10 SINE Alu 3 117 0 9 692 630 186 50 82 chr13 14071798 14071980 -106212332 + B2_Mm2 SINE B2 15 190 -5 9 692 212 259 0 17 chr13 14072418 14072477 -106211835 + B4A SINE B4 89 146 -146 9 692 301 266 84 11 chr13 14072424 14072519 -106211793 + PB1D10 SINE Alu 10 111 -6 9 692 519 213 65 0 chr13 14073213 14073321 -106210991 + B1_Mur3 SINE Alu 2 116 -33 1 692 233 198 0 12 chr13 14073945 14074027 -106210285 + (CAAA)n Simple_repeat Simple_repeat 4 84 0 1 692 621 100 0 0 chr13 14074147 14074237 -106210075 + (TCC)n Simple_repeat Simple_repeat 2 91 0 1 692 325 204 24 41 chr13 14074377 14074546 -106209766 - RMER17A LTR ERVK -286 465 300 1 692 216 0 0 0 chr13 14074696 14074720 -106209592 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 692 344 118 0 0 chr13 14074720 14074771 -106209541 - B1_Mus2 SINE Alu -96 51 1 1 692 264 59 0 0 chr13 14074779 14074813 -106209499 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1 692 1188 36 0 0 chr13 14074816 14074954 -106209358 + B1_Mm SINE Alu 2 139 -8 1 692 22 0 0 0 chr13 14074954 14074976 -106209336 + GC_rich Low_complexity Low_complexity 1 22 0 1 692 2521 157 29 0 chr13 14075127 14075536 -106208776 + MTC LTR MaLR 1 421 0 1 692 27 49 0 0 chr13 14076173 14076214 -106208098 + AT_rich Low_complexity Low_complexity 1 41 0 1 692 323 200 0 54 chr13 14076455 14076529 -106207783 - Lx8 LINE L1 -211 7262 7193 1 692 397 225 26 51 chr13 14076554 14076671 -106207641 - B1_Mur2 SINE Alu -2 147 34 1 692 328 286 78 39 chr13 14079071 14079224 -106205088 + L1M5 LINE L1 5504 5662 -462 1 692 407 242 22 11 chr13 14080009 14080101 -106204211 + PB1D7 SINE Alu 7 99 -21 1 692 1034 62 13 83 chr13 14080714 14080871 -106203441 + B1_Mm SINE Alu 2 147 0 1 692 243 278 0 0 chr13 14080888 14080942 -106203370 + RSINE1 SINE B4 10 63 -102 1 692 518 262 60 33 chr13 14081508 14081734 -106202578 + MTE2a LTR MaLR 6 261 -158 1 692 328 267 125 7 chr13 14081799 14081935 -106202377 + MTE2a LTR MaLR 268 419 0 1 692 746 226 24 0 chr13 14082658 14082822 -106201490 - ORR1D1 LTR MaLR -2 372 205 1 692 278 214 67 56 chr13 14082829 14082918 -106201394 + B3 SINE B2 126 215 -1 1 692 306 373 45 0 chr13 14083215 14083325 -106200987 + PB1D10 SINE Alu 2 116 -1 1 692 28 48 0 0 chr13 14083926 14083968 -106200344 + AT_rich Low_complexity Low_complexity 1 42 0 1 692 364 263 84 42 chr13 14084002 14084145 -106200167 - B3 SINE B2 -2 214 66 1 692 389 238 12 0 chr13 14085739 14085823 -106198489 + B1_Mur2 SINE Alu 10 94 -55 1 692 853 41 82 0 chr13 14086326 14086448 -106197864 + B1_Mus1 SINE Alu 6 137 -11 1 692 246 32 0 0 chr13 14086448 14086479 -106197833 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 692 486 0 0 0 chr13 14089008 14089062 -106195250 + (TCTA)n Simple_repeat Simple_repeat 2 55 0 1 692 540 0 0 0 chr13 14089063 14089123 -106195189 + (TTCC)n Simple_repeat Simple_repeat 4 63 0 1 692 27 73 0 0 chr13 14089424 14089479 -106194833 + AT_rich Low_complexity Low_complexity 1 55 0 1 692 377 277 142 55 chr13 14091423 14091641 -106192671 + MTEa LTR MaLR 143 379 0 1 692 477 220 17 68 chr13 14092635 14092752 -106191560 + PB1D10 SINE Alu 1 111 -6 1 692 239 230 81 0 chr13 14092771 14092845 -106191467 + PB1D10 SINE Alu 29 108 -9 1 692 1379 111 30 65 chr13 14093053 14093285 -106191027 + URR1B DNA MER1_type 1 224 -1 1 692 1037 122 0 0 chr13 14093694 14093842 -106190470 - B1_Mus1 SINE Alu 0 148 1 1 692 230 301 32 96 chr13 14094243 14094274 -106190038 + MT2B LTR ERVL 134 156 -445 1 692 526 141 70 4 chr13 14094274 14094388 -106189924 + PB1D9 SINE Alu 2 119 -1 1 692 554 303 142 0 chr13 14094421 14094682 -106189630 - MER44C DNA MER2_type -405 328 31 1 692 2253 83 19 6 chr13 14095338 14095654 -106188658 - L1_Mus3 LINE L1 -2 6636 6317 1 692 425 304 79 7 chr13 14096306 14096445 -106187867 + RSINE1 SINE B4 1 149 -16 1 692 408 264 108 0 chr13 14096471 14096600 -106187712 - B3 SINE B2 -1 215 73 1 692 1289 80 0 74 chr13 14097019 14097209 -106187103 - B2_Mm2 SINE B2 -18 177 2 1 692 391 198 25 0 chr13 14097275 14097356 -106186956 + PB1 SINE Alu 17 99 -28 1 692 325 197 0 73 chr13 14097887 14097969 -106186343 - B3 SINE B2 -140 76 1 1 692 366 266 122 0 chr13 14099140 14099279 -106185033 + RSINE1 SINE B4 6 161 -4 1 692 417 262 89 40 chr13 14099347 14099505 -106184807 + B3A SINE B2 39 195 0 1 692 498 242 0 98 chr13 14099510 14099643 -106184669 - B1_Mur3 SINE Alu 0 120 1 1 692 372 306 72 7 chr13 14099756 14099772 -106184540 + B1F SINE Alu 2 148 -1 1 692 521 215 41 8 chr13 14099772 14099894 -106184418 + ID_B1 SINE B4 99 224 0 1 692 906 216 60 5 chr13 14100103 14100303 -106184009 + B3 SINE B2 1 211 -5 1 692 236 304 0 0 chr13 14100331 14100387 -106183925 - tRNA-Ala-GCY_ tRNA tRNA -19 56 1 1 692 334 244 24 0 chr13 14100402 14100495 -106183817 - PB1D10 SINE Alu -7 120 22 1 692 198 71 0 0 chr13 14100516 14100544 -106183768 + (A)n Simple_repeat Simple_repeat 1 28 0 1 692 260 111 0 22 chr13 14102337 14102383 -106181929 + (GGAA)n Simple_repeat Simple_repeat 2 46 0 1 692 915 153 7 0 chr13 14103026 14103163 -106181149 - B1_Mur3 SINE Alu -11 138 1 1 692 281 250 43 14 chr13 14103258 14103327 -106180985 + ID4_ SINE ID 10 80 -3 1 692 282 143 0 0 chr13 14103555 14103604 -106180708 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 692 357 24 0 0 chr13 14104210 14104252 -106180060 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 692 22 0 0 0 chr13 14104273 14104295 -106180017 + AT_rich Low_complexity Low_complexity 1 22 0 1 692 413 109 0 0 chr13 14104295 14104359 -106179953 - L1_Mus3 LINE L1 -8 6630 6567 1 692 726 199 171 0 chr13 14104396 14104577 -106179735 - URR1B DNA MER1_type -12 213 2 1 692 440 121 14 0 chr13 14104862 14104941 -106179371 - MTC LTR MaLR 0 421 333 1 692 1164 155 82 0 chr13 14105089 14105308 -106179004 - MTC LTR MaLR -102 319 83 1 692 1133 82 0 0 chr13 14105796 14105943 -106178369 - B1_Mus1 SINE Alu 0 148 2 1 692 524 268 39 0 chr13 14105952 14106079 -106178233 - ID_B1 SINE B4 -7 217 86 1 692 350 276 144 16 chr13 14106226 14106351 -106177961 + B1F SINE Alu 1 141 -8 1 692 555 248 27 7 chr13 14106705 14106851 -106177461 + B1F SINE Alu 1 149 0 1 692 324 272 141 70 chr13 14107832 14108220 -106176092 + L1MB4 LINE L1 5698 6101 -88 1 692 285 320 53 13 chr13 14108433 14108585 -106175727 - MER119 DNA MER1_type 0 583 426 1 692 300 53 0 0 chr13 14108677 14108715 -106175597 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 1 692 427 157 169 0 chr13 14108721 14108804 -106175508 - PB1D10 SINE Alu -18 99 3 1 692 243 0 0 0 chr13 14108817 14108844 -106175468 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 692 624 128 5 0 chr13 14108844 14108950 -106175362 - B1_Mus2 SINE Alu -9 111 2 1 692 236 222 93 0 chr13 14109089 14109143 -106175169 + B1F1 SINE Alu 2 60 -89 1 692 217 232 114 14 chr13 14109090 14109160 -106175152 + ID_B1 SINE B4 84 160 -64 1 692 236 307 9 90 chr13 14109169 14109280 -106175032 + B4A SINE B4 43 144 -148 1 692 729 127 0 69 chr13 14109432 14109576 -106174736 + B1_Mus1 SINE Alu 15 148 0 1 692 216 0 0 0 chr13 14109649 14109673 -106174639 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 692 858 76 0 0 chr13 14109677 14109795 -106174517 - B1_Mus1 SINE Alu -5 143 26 1 692 227 245 0 19 chr13 14110026 14110080 -106174232 + MT2A LTR ERVL 71 123 -410 1 692 764 200 52 35 chr13 14110080 14110408 -106173904 + MT2A LTR ERVL 99 544 -57 1 692 345 24 0 0 chr13 14110408 14110450 -106173862 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 692 1472 158 161 20 chr13 14110457 14110805 -106173507 - MTB_Mm LTR MaLR -8 399 3 1 692 953 228 246 2 chr13 14110926 14111321 -106172991 + RLTR18B LTR ERVK 11 501 -11 1 692 347 289 40 32 chr13 14111346 14111471 -106172841 - RSINE1 SINE B4 -37 128 3 1 692 1195 28 7 0 chr13 14111499 14111641 -106172671 - B1_Mus1 SINE Alu -1 147 5 1 692 454 266 0 95 chr13 14111650 14111808 -106172504 - ID_B1 SINE B4 0 224 82 1 692 248 241 0 0 chr13 14112187 14112241 -106172071 + PB1 SINE Alu 3 56 -71 1 692 265 292 10 25 chr13 14112307 14112425 -106171887 + ID4_ SINE ID 14 129 -23 1 692 3268 111 42 71 chr13 14112479 14113101 -106171211 + RLTR6_Mm LTR ERV1 1 604 -50 1 692 26278 33 79 66 chr13 14113101 14116731 -106167581 + MMVL30-int LTR ERV1 21 3698 0 1 692 3134 112 43 73 chr13 14116731 14117336 -106166976 + RLTR6_Mm LTR ERV1 1 587 -67 1 692 23 0 0 0 chr13 14117344 14117367 -106166945 + AT_rich Low_complexity Low_complexity 1 23 0 1 692 471 169 12 0 chr13 14117550 14117633 -106166679 + B1_Mur3 SINE Alu 38 121 -28 1 692 189 0 0 0 chr13 14117640 14117661 -106166651 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 1 692 1150 68 0 7 chr13 14117741 14117890 -106166422 - B1_Mus1 SINE Alu 0 148 1 1 692 208 265 44 0 chr13 14117917 14117985 -106166327 + GA-rich Low_complexity Low_complexity 5 75 0 1 692 437 276 43 43 chr13 14117994 14118157 -106166155 + RSINE1 SINE B4 3 165 0 1 692 201 222 12 24 chr13 14118261 14118344 -106165968 + A-rich Low_complexity Low_complexity 1 82 0 1 692 541 213 78 35 chr13 14118350 14118491 -106165821 + B1_Mur1 SINE Alu 2 148 -1 1 692 22 0 0 0 chr13 14118987 14119009 -106165303 + AT_rich Low_complexity Low_complexity 1 22 0 1 692 602 183 43 9 chr13 14119234 14119350 -106164962 + B1_Mur1 SINE Alu 24 143 -6 1 692 371 348 0 0 chr13 14119376 14119491 -106164821 + ID_B1 SINE B4 87 201 -23 1 692 632 285 117 21 chr13 14119515 14119755 -106164557 + B4A SINE B4 8 270 -22 1 692 279 224 0 0 chr13 14119788 14119846 -106164466 - PB1D9 SINE Alu -62 58 1 1 692 372 43 0 0 chr13 14120266 14120312 -106164000 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 692 572 296 13 0 chr13 14120671 14120823 -106163489 - B3A SINE B2 -30 168 15 2 692 235 156 89 0 chr13 14121100 14121145 -106163167 - B1F1 SINE Alu -6 143 95 2 692 397 291 59 7 chr13 14121340 14121354 -106162958 - ID_B1 SINE B4 -1 223 82 2 692 570 231 25 0 chr13 14121354 14121475 -106162837 - B1_Mur1 SINE Alu -25 124 1 2 692 295 214 62 134 chr13 14121721 14121818 -106162494 - PB1D7 SINE Alu -29 91 2 2 692 858 286 52 45 chr13 14121839 14122128 -106162184 + B4A SINE B4 1 291 -1 2 692 222 37 0 0 chr13 14122134 14122161 -106162151 + (CATG)n Simple_repeat Simple_repeat 1 27 0 2 692 639 71 0 0 chr13 14122161 14122246 -106162066 + (CA)n Simple_repeat Simple_repeat 1 85 0 2 692 210 208 21 0 chr13 14122261 14122309 -106162003 + ID SINE ID 5 53 -171 2 692 252 114 0 0 chr13 14122314 14122349 -106161963 - MurSatRep1 Unknown Unknown -1867 270 236 2 692 338 271 177 16 chr13 14122452 14122576 -106161736 - ID_B1 SINE B4 0 224 81 2 692 304 260 39 0 chr13 14122601 14122678 -106161634 - PB1D10 SINE Alu -37 80 1 2 692 3021 32 73 0 chr13 14122825 14123194 -106161118 + MTA_Mm LTR MaLR 1 396 0 2 692 1316 178 224 40 chr13 14123473 14123825 -106160487 - RLTR33 LTR ERVK -87 591 175 2 692 337 319 21 48 chr13 14124235 14124380 -106159932 - L1MC LINE L1 -2251 5631 5491 2 692 256 254 11 0 chr13 14124410 14124487 -106159825 - ID4 SINE ID -58 94 17 2 692 331 21 42 0 chr13 14124767 14124815 -106159497 + (TC)n Simple_repeat Simple_repeat 2 51 0 2 692 24 0 0 0 chr13 14124815 14124839 -106159473 + AT_rich Low_complexity Low_complexity 1 24 0 2 692 691 296 38 51 chr13 14125086 14125378 -106158934 + B4A SINE B4 3 290 -2 2 692 229 312 142 9 chr13 14125544 14125657 -106158655 - L2a LINE L2 -31 3395 3268 2 692 1041 78 35 21 chr13 14125885 14126030 -106158282 + B1_Mus1 SINE Alu 1 147 -1 2 692 213 178 0 0 chr13 14126042 14126087 -106158225 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 692 211 255 21 0 chr13 14126488 14126535 -106157777 + PB1 SINE Alu 16 63 -64 2 692 216 268 0 0 chr13 14126570 14126626 -106157686 + ID4 SINE ID 3 58 -25 2 692 651 26 0 0 chr13 14126628 14126705 -106157607 + (GGAAA)n Simple_repeat Simple_repeat 4 80 0 2 692 474 183 112 22 chr13 14127241 14127375 -106156937 + B1_Mur4 SINE Alu 5 150 0 2 692 1091 209 9 5 chr13 14127443 14127654 -106156658 + B3 SINE B2 2 213 -3 2 692 1350 68 51 0 chr13 14127691 14127868 -106156444 + B2_Mm2 SINE B2 1 186 -9 2 692 1144 54 0 13 chr13 14128091 14128240 -106156072 + B1_Mus1 SINE Alu 2 148 0 2 692 412 219 151 0 chr13 14128285 14128404 -106155908 + B1F SINE Alu 6 142 -7 2 692 311 259 62 44 chr13 14128442 14128555 -106155757 + B1F SINE Alu 35 149 0 2 692 729 241 63 10 chr13 14128563 14128768 -106155544 + L1VL4 LINE L1 249 464 -5838 2 692 10016 153 68 8 chr13 14128751 14129503 -106154809 + L1_Mm LINE L1 3946 4793 -1090 2 692 3737 42 5 0 chr13 14129503 14129937 -106154375 + RLTR10C LTR ERVK 1 436 0 2 692 10016 153 68 8 chr13 14129937 14130983 -106153329 + L1_Mm LINE L1 4794 5852 -31 2 692 3293 115 21 17 chr13 14130985 14131517 -106152795 + Lx LINE L1 6121 6654 0 2 692 234 182 35 52 chr13 14132065 14132123 -106152189 + B1F SINE Alu 1 57 -92 2 692 406 289 51 32 chr13 14132685 14132842 -106151470 + LTR65 LTR ERV1 192 351 -318 2 692 270 180 0 20 chr13 14132860 14132911 -106151401 - ID_B1 SINE B4 -5 219 170 2 692 367 226 12 23 chr13 14132896 14132917 -106151395 + B4 SINE B4 66 85 -207 2 692 444 91 0 0 chr13 14132917 14132983 -106151329 + B1_Mur3 SINE Alu 1 66 -83 2 692 286 291 13 0 chr13 14132997 14133076 -106151236 - ID_B1 SINE B4 -58 166 87 2 692 321 300 50 0 chr13 14133143 14133263 -106151049 - RMER5 LTR ERV1 -39 495 370 2 692 749 128 8 8 chr13 14133268 14133394 -106150918 - Lx2 LINE L1 -937 6060 5935 2 692 225 0 0 0 chr13 14133860 14133885 -106150427 + (T)n Simple_repeat Simple_repeat 1 25 0 2 692 1151 48 7 14 chr13 14133885 14134033 -106150279 - B1_Mus1 SINE Alu 0 148 2 2 692 195 42 0 0 chr13 14134359 14134383 -106149929 + (T)n Simple_repeat Simple_repeat 1 24 0 2 692 28 0 0 0 chr13 14134403 14134431 -106149881 + AT_rich Low_complexity Low_complexity 1 28 0 2 692 351 0 0 0 chr13 14134464 14134503 -106149809 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 692 534 259 91 0 chr13 14134511 14134654 -106149658 + ID_B1 SINE B4 2 157 -67 2 692 277 265 90 58 chr13 14134711 14134867 -106149445 + RMER21B LTR ERV1 347 507 -335 2 692 603 83 352 0 chr13 14135051 14135159 -106149153 - B1_Mm SINE Alu 0 147 2 2 692 4334 204 25 43 chr13 14135165 14136126 -106148186 + RodERV21-int LTR ERV1 68 1011 -3980 2 692 453 19 0 0 chr13 14136259 14136313 -106147999 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 692 546 257 94 18 chr13 14136469 14136639 -106147673 + RLTR42-int LTR ERVK 1128 1310 -4212 2 692 1525 33 6 6 chr13 14137216 14137398 -106146914 - B2_Mm2 SINE B2 -13 182 1 2 692 548 247 6 73 chr13 14137398 14137577 -106146735 + RodERV21-int LTR ERV1 1044 1210 -3781 2 692 1134 175 10 10 chr13 14137583 14137779 -106146533 + RodERV21-int LTR ERV1 1323 1518 -3473 2 692 6167 101 11 75 chr13 14137787 14138761 -106145551 + MTB-int LTR MaLR 23 922 -176 2 692 1437 75 37 0 chr13 14138761 14138948 -106145364 + B2_Mm2 SINE B2 2 195 0 2 692 6167 101 11 75 chr13 14138948 14139122 -106145190 + MTB-int LTR MaLR 923 1097 -1 2 692 2704 84 22 60 chr13 14139122 14139538 -106144774 + MTB LTR MaLR 1 400 0 2 692 1223 54 0 0 chr13 14139605 14139752 -106144560 + B1_Mm SINE Alu 1 147 0 2 692 279 0 0 0 chr13 14139752 14139783 -106144529 + (A)n Simple_repeat Simple_repeat 1 31 0 2 692 250 282 74 30 chr13 14139783 14139918 -106144394 + RMER5 LTR ERV1 73 213 -321 2 692 319 297 33 0 chr13 14139925 14140016 -106144296 - B1F SINE Alu 0 149 56 2 692 259 385 48 16 chr13 14140016 14140049 -106144263 - ID_B1 SINE B4 0 224 97 2 692 377 275 74 23 chr13 14140057 14140231 -106144081 + RMER5 LTR ERV1 221 403 -131 2 692 481 246 86 65 chr13 14140231 14140370 -106143942 + RSINE1 SINE B4 3 144 -21 2 692 29 0 0 0 chr13 14140370 14140399 -106143913 + AT_rich Low_complexity Low_complexity 1 29 0 2 692 666 276 57 9 chr13 14140550 14140762 -106143550 + B4A SINE B4 6 227 -65 2 692 549 264 48 7 chr13 14140763 14140908 -106143404 + RSINE1 SINE B4 2 152 -13 2 692 415 216 39 0 chr13 14140971 14141073 -106143239 + B1_Mus1 SINE Alu 40 145 -3 2 692 367 194 42 0 chr13 14141180 14141252 -106143060 - B3A SINE B2 -123 75 1 2 692 1062 282 18 18 chr13 14141393 14141675 -106142637 - B4A SINE B4 0 292 11 2 692 326 252 67 8 chr13 14141797 14141917 -106142395 - B1F SINE Alu 0 149 23 2 692 1960 154 91 3 chr13 14142176 14142528 -106141784 + ORR1C2 LTR MaLR 1 383 -1 2 692 331 216 176 0 chr13 14142660 14142762 -106141550 + B1_Mur1 SINE Alu 2 121 -28 2 692 441 0 0 0 chr13 14142776 14142825 -106141487 + (CATA)n Simple_repeat Simple_repeat 4 52 0 2 692 23 33 0 0 chr13 14142937 14142967 -106141345 + AT_rich Low_complexity Low_complexity 1 30 0 2 692 334 208 165 19 chr13 14143215 14143318 -106140994 - B1_Mur2 SINE Alu -13 136 19 2 692 322 324 65 0 chr13 14143463 14143571 -106140741 - ID_B1 SINE B4 -29 195 81 2 692 998 137 200 0 chr13 14144208 14144383 -106139929 - B3 SINE B2 -3 213 4 2 692 464 220 8 63 chr13 14144553 14144679 -106139633 + PB1D9 SINE Alu 2 120 0 2 692 514 275 8 0 chr13 14144703 14144834 -106139478 - ID_B1 SINE B4 0 224 93 2 692 23 0 0 0 chr13 14145371 14145394 -106138918 + AT_rich Low_complexity Low_complexity 1 23 0 2 692 818 196 124 5 chr13 14145394 14145579 -106138733 - B3 SINE B2 -8 208 2 2 692 1387 38 51 71 chr13 14145686 14145883 -106138429 + B2_Mm1a SINE B2 1 193 0 2 692 829 170 30 94 chr13 14146820 14147021 -106137291 - B3A SINE B2 -9 189 2 2 692 239 264 0 0 chr13 14147311 14147364 -106136948 + ID4 SINE ID 2 54 -29 2 692 23 33 0 0 chr13 14147520 14147550 -106136762 + AT_rich Low_complexity Low_complexity 1 30 0 2 692 406 301 123 0 chr13 14147562 14147708 -106136604 - RSINE1 SINE B4 0 165 2 2 692 1224 55 0 0 chr13 14147760 14147906 -106136406 + B1_Mus2 SINE Alu 2 147 0 2 692 194 0 39 0 chr13 14147916 14147942 -106136370 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 692 674 222 6 74 chr13 14148089 14148264 -106136048 + B3A SINE B2 7 169 -29 2 692 834 148 0 34 chr13 14148538 14148685 -106135627 + B1_Mur4 SINE Alu 9 150 0 2 692 1220 40 99 33 chr13 14148687 14148868 -106135444 + B2_Mm1a SINE B2 1 193 0 2 692 657 204 137 21 chr13 14149191 14149381 -106134931 + B3 SINE B2 1 212 -4 2 692 327 223 202 0 chr13 14149392 14149486 -106134826 + PB1D9 SINE Alu 3 115 -5 2 692 566 269 31 43 chr13 14149614 14149777 -106134535 + B3A SINE B2 8 168 -30 2 692 545 252 0 16 chr13 14149789 14149914 -106134398 + B1F1 SINE Alu 27 149 0 2 692 505 249 45 62 chr13 14150264 14150563 -106133749 + L1MB8 LINE L1 5828 6127 -51 2 692 342 323 10 0 chr13 14150574 14150673 -106133639 - PB1D10 SINE Alu -17 100 1 2 692 324 264 22 44 chr13 14151174 14151265 -106133047 - PB1D10 SINE Alu -28 89 1 2 692 348 245 59 30 chr13 14151627 14151728 -106132584 - RSINE1 SINE B4 -60 105 2 2 692 367 296 135 23 chr13 14151853 14152112 -106132200 - B4A SINE B4 0 292 5 3 692 270 312 55 9 chr13 14152212 14152322 -106131990 - PB1D10 SINE Alu 0 117 3 3 692 258 140 0 23 chr13 14152373 14152417 -106131895 - ORR1D1 LTR MaLR 0 384 342 3 692 648 248 51 0 chr13 14152417 14152554 -106131758 + B1_Mur2 SINE Alu 1 144 -5 3 692 723 232 44 49 chr13 14152607 14152811 -106131501 - ORR1D1 LTR MaLR -31 343 141 3 692 5363 98 13 33 chr13 14152814 14153660 -106130652 + Lx3B LINE L1 6094 6922 -51 3 692 28 0 0 0 chr13 14153758 14153786 -106130526 + AT_rich Low_complexity Low_complexity 1 28 0 3 692 23 0 0 0 chr13 14154222 14154245 -106130067 + AT_rich Low_complexity Low_complexity 1 23 0 3 692 361 164 60 0 chr13 14154512 14154579 -106129733 - B1F SINE Alu -5 144 74 3 693 210 309 0 29 chr13 14155979 14156049 -106128263 + G-rich Low_complexity Low_complexity 2 69 0 3 693 27 92 0 0 chr13 14156574 14156650 -106127662 + GC_rich Low_complexity Low_complexity 1 76 0 3 693 297 0 0 0 chr13 14157232 14157265 -106127047 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 693 46 0 0 0 chr13 14158039 14158085 -106126227 + AT_rich Low_complexity Low_complexity 1 46 0 3 693 378 61 0 0 chr13 14158212 14158261 -106126051 + (T)n Simple_repeat Simple_repeat 1 49 0 3 693 186 179 0 25 chr13 14158572 14158612 -106125700 + L2b LINE L2 3328 3366 -9 3 693 256 248 178 0 chr13 14158729 14158830 -106125482 + ID_B1 SINE B4 81 199 -25 3 693 282 215 50 12 chr13 14158802 14158882 -106125430 + B1_Mm SINE Alu 63 145 -2 3 693 454 219 189 63 chr13 14159122 14159297 -106125015 + B3A SINE B2 2 198 0 3 693 458 239 44 9 chr13 14159318 14159432 -106124880 + PB1D9 SINE Alu 3 120 0 3 693 360 64 0 0 chr13 14159506 14159553 -106124759 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 693 431 262 75 0 chr13 14160001 14160108 -106124204 - RSINE1 SINE B4 -40 125 11 3 693 240 304 0 0 chr13 14160476 14160545 -106123767 + T-rich Low_complexity Low_complexity 1 69 0 3 693 638 246 84 62 chr13 14161146 14161371 -106122941 + B4A SINE B4 2 231 -61 3 693 365 203 27 0 chr13 14161384 14161458 -106122854 + RSINE1 SINE B4 2 77 -88 3 693 411 283 8 55 chr13 14161656 14161783 -106122529 - RSINE1 SINE B4 -3 162 42 3 693 315 0 0 0 chr13 14161890 14161925 -106122387 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 693 22 0 0 0 chr13 14162415 14162437 -106121875 + AT_rich Low_complexity Low_complexity 1 22 0 3 693 23 0 0 0 chr13 14162475 14162498 -106121814 + AT_rich Low_complexity Low_complexity 1 23 0 3 693 607 228 82 14 chr13 14162627 14162774 -106121538 - RSINE1 SINE B4 -6 159 3 3 693 184 30 29 29 chr13 14162966 14163000 -106121312 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 693 997 103 13 27 chr13 14163002 14163152 -106121160 - B1_Mus1 SINE Alu 0 148 1 3 693 568 267 93 16 chr13 14164008 14164202 -106120110 - ID_B1 SINE B4 -2 222 14 3 693 1394 82 6 0 chr13 14164236 14164418 -106119894 - B2_Mm1t SINE B2 -9 184 2 3 693 205 250 0 13 chr13 14164626 14164665 -106119647 + T-rich Low_complexity Low_complexity 44 81 0 3 693 562 241 35 35 chr13 14164665 14164807 -106119505 - B1_Mur2 SINE Alu -7 142 1 3 693 205 250 0 13 chr13 14164807 14164844 -106119468 + T-rich Low_complexity Low_complexity 7 43 0 3 693 620 104 18 36 chr13 14164848 14164958 -106119354 + B1_Mur4 SINE Alu 43 150 0 3 693 222 37 0 0 chr13 14164960 14164987 -106119325 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 693 599 168 18 18 chr13 14164987 14165096 -106119216 - B3A SINE B2 -86 112 4 3 693 21 0 0 0 chr13 14165208 14165229 -106119083 + AT_rich Low_complexity Low_complexity 1 21 0 3 693 583 162 0 35 chr13 14165264 14165379 -106118933 - B1_Mur3 SINE Alu -8 141 31 3 693 772 82 11 3 chr13 14165423 14165551 -106118761 - B1_Mus1 SINE Alu -21 128 1 3 693 487 274 7 43 chr13 14165602 14165743 -106118569 - ID_B1 SINE B4 -6 218 83 3 693 557 214 62 41 chr13 14165940 14166086 -106118226 - B1_Mur1 SINE Alu 0 149 1 3 693 423 0 0 0 chr13 14167329 14167376 -106116936 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 693 470 215 113 106 chr13 14167379 14167530 -106116782 - B3A SINE B2 -45 153 2 3 693 775 242 88 21 chr13 14167629 14167823 -106116489 - B3 SINE B2 -9 207 1 3 693 24 0 0 0 chr13 14168361 14168385 -106115927 + AT_rich Low_complexity Low_complexity 1 24 0 3 693 553 308 30 42 chr13 14168417 14168583 -106115729 - RSINE1 SINE B4 0 165 2 3 693 292 26 0 0 chr13 14168590 14168628 -106115684 + RMER30 DNA MER1_type 108 145 -57 3 693 664 145 17 0 chr13 14168649 14168779 -106115533 - B1_Mus2 SINE Alu -4 146 6 3 693 617 123 122 8 chr13 14168796 14168927 -106115385 - URR1B DNA MER1_type 0 225 80 3 693 252 22 43 22 chr13 14168936 14168982 -106115330 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 3 693 1201 61 0 0 chr13 14168983 14169131 -106115181 - B1_Mus1 SINE Alu 0 148 1 3 693 1541 47 5 0 chr13 14169134 14169325 -106114987 - B2_Mm1a SINE B2 0 193 2 3 693 1349 84 15 40 chr13 14169332 14169531 -106114781 - B2_Mm2 SINE B2 0 195 2 3 693 271 256 88 128 chr13 14169668 14169816 -106114496 - B4A SINE B4 -148 144 3 3 693 294 246 31 0 chr13 14169883 14169948 -106114364 - ID4 SINE ID -16 67 1 3 693 210 158 0 0 chr13 14170104 14170142 -106114170 + A-rich Low_complexity Low_complexity 1 38 0 3 693 464 316 0 0 chr13 14170798 14170915 -106113397 - RSINE1 SINE B4 -2 163 47 3 693 529 244 151 11 chr13 14171562 14171748 -106112564 - B3 SINE B2 -3 213 2 3 693 1180 41 0 58 chr13 14171883 14172039 -106112273 - B1_Mm SINE Alu 0 147 1 3 693 296 310 63 0 chr13 14172098 14172217 -106112095 - MIRc SINE MIR -75 193 71 3 693 14999 115 18 8 chr13 14172487 14173682 -106110630 - Lx LINE L1 -3 6651 5462 3 693 1158 75 0 0 chr13 14173682 14173829 -106110483 - B1_Mus1 SINE Alu 0 148 2 3 693 14999 164 30 36 chr13 14173829 14174976 -106109336 - Lx LINE L1 -422 5461 4365 3 693 1143 62 0 7 chr13 14174976 14175122 -106109190 - B1_Mus2 SINE Alu -1 146 2 3 693 14999 164 30 36 chr13 14175122 14176697 -106107615 - Lx LINE L1 -1519 4364 2739 3 693 881 166 51 0 chr13 14176700 14176875 -106107437 - L1VL2 LINE L1 -5868 467 284 3 693 236 307 101 51 chr13 14176931 14177089 -106107223 + B2_Mm2 SINE B2 7 172 -23 3 693 370 326 75 15 chr13 14177413 14177547 -106106765 + B1F SINE Alu 5 146 -3 3 693 350 234 244 35 chr13 14177646 14177761 -106106551 - B1_Mur1 SINE Alu -1 148 10 3 693 234 229 0 20 chr13 14177774 14177823 -106106489 - B1F2 SINE Alu -89 60 13 3 693 583 242 21 36 chr13 14177825 14178004 -106106308 + B3 SINE B2 6 185 -10 3 693 213 65 0 0 chr13 14178065 14178096 -106106216 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 693 309 182 0 0 chr13 14178478 14178533 -106105779 - B3 SINE B2 -160 56 2 3 693 241 196 18 0 chr13 14178538 14178594 -106105718 - Charlie12 DNA MER1_type -2765 108 52 3 693 284 64 21 0 chr13 14178548 14178595 -106105717 + RMER30 DNA MER1_type 104 151 -51 3 693 311 295 0 114 chr13 14178607 14178756 -106105556 - MLT1D LTR MaLR -373 132 1 3 693 181 247 107 27 chr13 14178780 14178855 -106105457 + MIRc SINE MIR 118 198 -70 3 693 26 50 0 32 chr13 14179363 14179398 -106104914 + AT_rich Low_complexity Low_complexity 1 35 0 3 693 276 77 0 0 chr13 14179398 14179437 -106104875 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3 693 1185 43 0 0 chr13 14179437 14179576 -106104736 - B1_Mus1 SINE Alu -9 139 1 3 693 26 50 0 32 chr13 14179576 14179601 -106104711 + AT_rich Low_complexity Low_complexity 1 24 0 3 693 922 29 0 0 chr13 14179705 14179810 -106104502 + U6 snRNA snRNA 1 105 -2 3 693 1171 244 125 5 chr13 14179842 14180217 -106104095 - Lx8 LINE L1 -189 7284 6865 3 693 27 0 0 0 chr13 14180359 14180386 -106103926 + AT_rich Low_complexity Low_complexity 1 27 0 3 693 632 295 47 7 chr13 14180464 14180614 -106103698 + B3 SINE B2 1 156 -60 3 693 180 0 0 0 chr13 14181715 14181735 -106102577 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 693 695 165 52 52 chr13 14181753 14181887 -106102425 - B1_Mur4 SINE Alu -11 139 6 3 693 267 289 58 134 chr13 14181777 14181949 -106102363 - MT2B2 LTR ERVL -320 264 106 3 693 1144 58 0 0 chr13 14181955 14182093 -106102219 + B1_Mus2 SINE Alu 1 138 -9 3 693 420 37 0 0 chr13 14182093 14182147 -106102165 + (CAAAC)n Simple_repeat Simple_repeat 2 55 0 3 693 207 65 65 0 chr13 14182147 14182193 -106102119 + (CAA)n Simple_repeat Simple_repeat 3 51 0 3 693 1113 137 132 0 chr13 14182272 14182469 -106101843 - URR1B DNA MER1_type -2 223 1 3 693 734 105 0 9 chr13 14182933 14183048 -106101264 + (TA)n Simple_repeat Simple_repeat 1 114 0 3 693 336 77 0 0 chr13 14183048 14183100 -106101212 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 693 740 43 0 0 chr13 14183149 14183243 -106101069 + B1_Mus2 SINE Alu 1 94 -53 3 693 463 151 22 10 chr13 14183275 14183364 -106100948 + B1_Mm SINE Alu 24 137 -10 3 693 27 0 0 0 chr13 14183526 14183553 -106100759 + AT_rich Low_complexity Low_complexity 1 27 0 3 693 983 61 8 8 chr13 14183553 14183685 -106100627 - B1_Mus1 SINE Alu 0 148 17 3 693 222 175 0 24 chr13 14184220 14184261 -106100051 + ID4 SINE ID 4 43 -40 3 693 1169 61 7 0 chr13 14184502 14184649 -106099663 + B1_Mus1 SINE Alu 1 148 0 3 693 247 151 27 14 chr13 14184649 14184723 -106099589 + (TAAA)n Simple_repeat Simple_repeat 2 76 0 3 693 198 191 0 0 chr13 14184744 14184786 -106099526 + CT-rich Low_complexity Low_complexity 2 43 0 4 693 517 256 92 92 chr13 14184823 14185008 -106099304 - B3A SINE B2 -3 195 11 4 693 651 26 0 0 chr13 14185021 14185098 -106099214 + (TTTCC)n Simple_repeat Simple_repeat 3 79 0 4 693 201 74 0 0 chr13 14185098 14185125 -106099187 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 693 29 28 0 0 chr13 14185215 14185251 -106099061 + AT_rich Low_complexity Low_complexity 1 36 0 4 693 261 0 0 0 chr13 14185490 14185519 -106098793 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 693 529 14 14 14 chr13 14185519 14185589 -106098723 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 693 2038 119 35 56 chr13 14185776 14186150 -106098162 - Lx LINE L1 0 6654 6289 4 693 387 141 0 0 chr13 14186154 14186218 -106098094 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 693 1237 72 0 22 chr13 14186218 14186402 -106097910 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 693 509 219 296 12 chr13 14186405 14186567 -106097745 - B3 SINE B2 -4 212 5 4 693 480 295 0 15 chr13 14186599 14186730 -106097582 - ID_B1 SINE B4 -17 207 79 4 693 685 126 99 16 chr13 14186813 14186934 -106097378 - B1_Mur4 SINE Alu 0 150 20 4 693 334 263 53 0 chr13 14186971 14187066 -106097246 - L1MC4 LINE L1 -1159 6883 6784 4 693 574 167 0 0 chr13 14187125 14187221 -106097091 + PB1D7 SINE Alu 24 119 -1 4 693 312 320 109 0 chr13 14187302 14187449 -106096863 - RSINE1 SINE B4 0 165 3 4 693 1378 126 17 39 chr13 14187815 14188046 -106096266 + URR1A DNA MER1_type 1 226 0 4 693 344 253 40 0 chr13 14189670 14189745 -106094567 - B1_Mus1 SINE Alu -67 81 4 4 693 1185 65 0 0 chr13 14189749 14189904 -106094408 + (TTTTC)n Simple_repeat Simple_repeat 4 158 0 4 693 914 46 8 67 chr13 14189909 14190288 -106094024 + (TTCC)n Simple_repeat Simple_repeat 1 356 0 4 693 1015 84 0 0 chr13 14190301 14190432 -106093880 - B1_Mus1 SINE Alu -16 132 2 4 693 21 36 0 0 chr13 14190476 14190504 -106093808 + AT_rich Low_complexity Low_complexity 1 28 0 4 693 552 235 44 29 chr13 14190711 14190847 -106093465 - B1_Mur3 SINE Alu -2 147 10 4 693 291 252 76 101 chr13 14190754 14190873 -106093439 - B4 SINE B4 -100 192 77 4 693 621 294 6 11 chr13 14190882 14191064 -106093248 - B3A SINE B2 -17 181 1 4 693 488 300 17 40 chr13 14191320 14191355 -106092957 + ID_B1 SINE B4 52 223 0 4 693 821 164 7 7 chr13 14191355 14191496 -106092816 + B1_Mur4 SINE Alu 10 150 0 4 693 258 217 100 0 chr13 14191697 14191757 -106092555 + RSINE1 SINE B4 72 137 -28 4 693 948 261 56 38 chr13 14191956 14192243 -106092069 - B4A SINE B4 0 292 1 4 693 823 235 0 0 chr13 14192341 14192490 -106091822 + B1_Mur3 SINE Alu 1 149 0 4 693 284 281 129 58 chr13 14192756 14192911 -106091401 - Helitron3Na_Mam RC Helitron -63 423 258 4 693 1190 287 96 67 chr13 14193329 14193810 -106090502 - MER68 LTR ERVL -30 533 39 4 693 626 264 0 13 chr13 14193936 14194086 -106090226 - B1_Mur1 SINE Alu -1 148 1 4 693 983 241 9 0 chr13 14194152 14194364 -106089948 - B3 SINE B2 -1 215 2 4 693 690 13 0 0 chr13 14194452 14194531 -106089781 + (TTCTC)n Simple_repeat Simple_repeat 4 82 0 4 693 478 344 37 0 chr13 14194709 14194872 -106089440 - MER5A DNA MER1_type -19 170 2 4 693 222 97 0 75 chr13 14195710 14195777 -106088535 + T-rich Low_complexity Low_complexity 4 65 0 4 693 627 14 0 0 chr13 14196353 14196425 -106087887 + (TCCCC)n Simple_repeat Simple_repeat 5 76 0 4 693 1010 84 0 0 chr13 14196437 14196568 -106087744 - B1_Mus2 SINE Alu -16 131 1 4 693 279 0 0 0 chr13 14197077 14197108 -106087204 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 693 1550 39 19 24 chr13 14197538 14197750 -106086562 + L1Md_F3 LINE L1 6374 6584 0 4 693 191 36 36 0 chr13 14197766 14197794 -106086518 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 693 634 275 23 0 chr13 14197896 14198027 -106086285 + RSINE1 SINE B4 3 136 -29 4 693 248 279 155 0 chr13 14198072 14198201 -106086111 + MER104 DNA Tc2 33 181 0 4 693 624 228 60 100 chr13 14198303 14198503 -106085809 - B3 SINE B2 -2 214 23 4 693 825 194 0 0 chr13 14198523 14198693 -106085619 + GA-rich Low_complexity Low_complexity 4 173 0 4 693 439 283 71 14 chr13 14199145 14199285 -106085027 - B1_Mur2 SINE Alu 0 149 2 4 693 38 0 0 0 chr13 14199320 14199358 -106084954 + AT_rich Low_complexity Low_complexity 1 38 0 4 693 7656 66 6 4 chr13 14199460 14200548 -106083764 - L1_Mus3 LINE L1 -20 6618 5528 4 693 5527 96 0 16 chr13 14200544 14201367 -106082945 + L1_Mm LINE L1 4885 5694 -189 4 693 266 196 0 19 chr13 14201673 14201725 -106082587 + URR1A DNA MER1_type 175 225 -1 4 693 396 260 148 8 chr13 14201897 14202025 -106082287 + MTE2b LTR MaLR 3 148 -231 4 693 808 102 17 8 chr13 14202246 14202365 -106081947 + PB1D9 SINE Alu 1 120 0 4 693 346 165 12 12 chr13 14202486 14202566 -106081746 + CT-rich Low_complexity Low_complexity 3 82 0 4 693 648 219 36 7 chr13 14202566 14202704 -106081608 - B1_Mur1 SINE Alu -3 146 5 4 693 1041 248 107 28 chr13 14202726 14203045 -106081267 - ORR1E LTR MaLR -2 357 14 4 693 519 355 13 6 chr13 14204054 14204210 -106080102 - RSINE1 SINE B4 -7 158 2 4 693 666 300 56 48 chr13 14204214 14204445 -106079867 - B4A SINE B4 -59 233 1 4 693 385 346 8 23 chr13 14204585 14204715 -106079597 - ID_B1 SINE B4 -5 219 92 4 693 498 245 78 48 chr13 14204721 14204927 -106079385 - L1MC4 LINE L1 -1030 7012 6801 4 693 455 0 18 0 chr13 14205033 14205088 -106079224 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 693 354 45 0 0 chr13 14206114 14206158 -106078154 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 693 1158 163 0 5 chr13 14207093 14207284 -106077028 - ORR1B1 LTR MaLR -8 386 197 4 693 3050 107 17 24 chr13 14207286 14207753 -106076559 - RMER16 LTR ERVK 0 533 70 4 693 949 161 57 11 chr13 14207796 14207972 -106076340 - ORR1B1 LTR MaLR -186 208 25 4 693 745 175 42 7 chr13 14208181 14208325 -106075987 + B1_Mur4 SINE Alu 2 150 0 4 693 610 241 7 33 chr13 14208362 14208512 -106075800 - RSINE1 SINE B4 -17 148 3 4 693 347 309 0 43 chr13 14208513 14208628 -106075684 - B4 SINE B4 -63 229 120 4 693 527 168 18 27 chr13 14208601 14208711 -106075601 - B1_Mur2 SINE Alu -36 113 5 4 693 300 70 0 0 chr13 14208764 14208807 -106075505 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 693 592 248 57 38 chr13 14208816 14208975 -106075337 - RSINE1 SINE B4 -2 163 2 4 693 659 339 26 0 chr13 14209115 14209304 -106075008 - B4A SINE B4 -98 194 1 4 693 844 246 28 0 chr13 14209775 14209954 -106074358 + B3 SINE B2 23 206 -10 4 693 23 0 0 0 chr13 14210204 14210227 -106074085 + AT_rich Low_complexity Low_complexity 1 23 0 4 693 668 206 6 82 chr13 14210265 14210424 -106073888 + B1_Mur1 SINE Alu 3 149 0 4 693 4004 67 0 4 chr13 14210492 14211000 -106073312 - L1Md_F2 LINE L1 -15 6567 6062 4 693 726 191 0 9 chr13 14211007 14211123 -106073189 - 5S rRNA rRNA 0 121 7 4 693 29 0 0 0 chr13 14212260 14212289 -106072023 + AT_rich Low_complexity Low_complexity 1 29 0 4 693 10051 60 4 1 chr13 14212634 14214685 -106069627 - L1Md_F2 LINE L1 -2 6580 4523 4 693 246 247 56 93 chr13 14214886 14214899 -106069413 + MT2B LTR ERVL 151 249 -348 4 693 359 292 33 11 chr13 14214899 14214989 -106069323 + PB1D9 SINE Alu 2 93 -27 4 693 327 279 12 37 chr13 14215038 14215120 -106069192 - ID SINE ID -142 82 3 4 693 343 271 143 20 chr13 14215148 14215246 -106069066 - PB1D10 SINE Alu -6 111 2 4 693 351 339 9 0 chr13 14215346 14215458 -106068854 + PB1 SINE Alu 11 123 -4 4 693 315 253 37 25 chr13 14215464 14215545 -106068767 + ID4 SINE ID 1 82 -1 4 693 225 0 0 0 chr13 14215857 14215882 -106068430 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 4 693 1616 27 21 0 chr13 14215882 14216070 -106068242 - B2_Mm1a SINE B2 0 193 2 4 693 192 316 9 104 chr13 14216595 14216701 -106067611 + L2b LINE L2 3272 3367 -8 4 693 315 193 0 0 chr13 14216792 14216849 -106067463 + B3A SINE B2 3 59 -139 4 693 25 31 0 0 chr13 14216898 14216930 -106067382 + AT_rich Low_complexity Low_complexity 1 32 0 4 693 485 200 0 87 chr13 14216947 14217062 -106067250 + PB1D9 SINE Alu 11 115 -5 4 693 315 231 21 239 chr13 14217345 14217533 -106066779 - B1_Mur2 SINE Alu -1 148 2 4 693 180 0 0 0 chr13 14217556 14217576 -106066736 + (T)n Simple_repeat Simple_repeat 1 20 0 4 693 535 214 24 57 chr13 14217584 14217708 -106066604 + B1_Mur1 SINE Alu 23 142 -7 4 693 355 348 14 28 chr13 14217745 14217887 -106066425 + MIR SINE MIR 10 149 -113 4 693 340 231 242 0 chr13 14218031 14218122 -106066190 + PB1D10 SINE Alu 5 117 0 4 693 1118 81 67 39 chr13 14218272 14218451 -106065861 + B2_Mm2 SINE B2 2 185 -10 4 693 206 79 53 0 chr13 14218648 14218686 -106065626 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 4 693 22 35 0 0 chr13 14219359 14219388 -106064924 + AT_rich Low_complexity Low_complexity 1 29 0 4 693 233 301 71 12 chr13 14219497 14219581 -106064731 - MIRb SINE MIR -8 260 172 4 693 274 75 0 54 chr13 14219890 14219946 -106064366 + (TTTTTG)n Simple_repeat Simple_repeat 1 53 0 4 693 483 310 18 31 chr13 14220497 14220660 -106063652 + Charlie1a DNA MER1_type 27 187 -1268 4 693 1600 192 80 70 chr13 14220738 14221336 -106062976 - BGLII_B LTR ERVK -46 515 1 5 693 28 48 0 0 chr13 14221542 14221584 -106062728 + AT_rich Low_complexity Low_complexity 1 42 0 5 693 327 49 0 0 chr13 14222001 14222042 -106062270 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 693 223 333 62 0 chr13 14222043 14222124 -106062188 - B1F SINE Alu -60 89 4 5 693 464 297 27 0 chr13 14222124 14222191 -106062121 + RSINE1 SINE B4 51 120 -45 5 693 339 172 0 33 chr13 14222224 14222275 -106062037 + MTC LTR MaLR 1 50 -371 5 693 5952 110 26 42 chr13 14222275 14223233 -106061079 + L1Md_F2 LINE L1 5639 6581 -1 5 693 1258 157 52 5 chr13 14223236 14223447 -106060865 + MTC LTR MaLR 196 416 -5 5 693 1018 122 0 7 chr13 14223616 14223765 -106060547 - B1_Mus1 SINE Alu 0 148 1 5 693 252 0 0 0 chr13 14224258 14224286 -106060026 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 693 273 118 0 0 chr13 14224286 14224337 -106059975 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 693 461 219 148 9 chr13 14224372 14224487 -106059825 - RSINE1 SINE B4 -32 133 3 5 693 875 174 0 39 chr13 14224834 14224989 -106059323 - B1_Mur2 SINE Alu 0 149 1 5 693 481 278 17 0 chr13 14225218 14225333 -106058979 - PB1D10 SINE Alu 0 117 1 5 693 267 253 82 71 chr13 14225248 14225346 -106058966 - MT2B LTR ERVL -358 243 145 5 693 448 280 0 88 chr13 14226489 14226626 -106057686 - ID_B1 SINE B4 0 224 100 5 693 274 239 108 54 chr13 14226657 14226750 -106057562 - PB1D7 SINE Alu 0 120 23 5 693 232 341 11 84 chr13 14227154 14227333 -106056979 - L2c LINE L2 -17 3370 3205 5 693 26 74 0 0 chr13 14229133 14229187 -106055125 + AT_rich Low_complexity Low_complexity 1 54 0 5 693 626 299 48 6 chr13 14229415 14229580 -106054732 + B3A SINE B2 5 176 -22 5 693 477 0 0 0 chr13 14229590 14229643 -106054669 + (CATA)n Simple_repeat Simple_repeat 4 56 0 5 693 313 250 82 55 chr13 14230086 14230097 -106054215 + MT2B LTR ERVL 162 209 -392 5 693 410 161 207 0 chr13 14230097 14230184 -106054128 + PB1D9 SINE Alu 10 114 -6 5 693 313 250 82 55 chr13 14230184 14230196 -106054116 + MT2B LTR ERVL 210 274 -327 5 693 253 280 195 0 chr13 14230483 14230601 -106053711 + MIR SINE MIR 34 174 -88 5 693 412 247 40 22 chr13 14230957 14231110 -106053202 + B3 SINE B2 17 173 -22 5 693 4335 40 4 0 chr13 14231611 14232137 -106052175 + L1Md_F2 LINE L1 6043 6570 -12 5 693 346 336 0 0 chr13 14232186 14232290 -106052022 + PB1D10 SINE Alu 4 107 -10 5 693 302 294 17 92 chr13 14232789 14232909 -106051403 - L1MB7 LINE L1 -28 6156 6046 5 693 25 0 0 0 chr13 14232950 14232975 -106051337 + AT_rich Low_complexity Low_complexity 1 25 0 5 693 1880 221 70 10 chr13 14233477 14233857 -106050455 - Lx5 LINE L1 -11 7039 6633 5 693 486 0 0 0 chr13 14233857 14233911 -106050401 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 693 1880 221 70 10 chr13 14233911 14234014 -106050298 - Lx5 LINE L1 -418 6632 6528 5 693 252 154 0 0 chr13 14234019 14234058 -106050254 + Lx4B LINE L1 5775 5813 -1245 5 693 483 129 0 0 chr13 14234269 14234354 -106049958 + Lx3A LINE L1 6897 6981 0 5 693 645 213 151 16 chr13 14234642 14234828 -106049484 - B3 SINE B2 -5 211 1 5 693 455 231 26 53 chr13 14235025 14235139 -106049173 - PB1D10 SINE Alu -1 116 6 5 693 668 237 50 34 chr13 14235446 14235625 -106048687 + B2_Mm2 SINE B2 1 182 -13 5 693 732 280 17 0 chr13 14235620 14235795 -106048517 - B3A SINE B2 -10 188 11 5 693 384 283 81 32 chr13 14236260 14236384 -106047928 + RSINE1 SINE B4 3 132 -33 5 693 22 35 0 0 chr13 14236403 14236432 -106047880 + AT_rich Low_complexity Low_complexity 1 29 0 5 693 462 36 0 0 chr13 14236905 14236961 -106047351 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 5 693 244 317 19 37 chr13 14236969 14237077 -106047235 - PB1D10 SINE Alu -9 108 3 5 693 25 31 0 0 chr13 14237099 14237131 -106047181 + AT_rich Low_complexity Low_complexity 1 32 0 5 693 326 240 13 39 chr13 14237183 14237261 -106047051 - RSINE1 SINE B4 -36 129 54 5 693 243 289 38 27 chr13 14237231 14237325 -106046987 - PB1D9 SINE Alu -54 96 3 5 693 479 377 14 0 chr13 14237927 14238073 -106046239 - RSINE1 SINE B4 -7 158 11 5 693 1101 168 17 76 chr13 14238135 14238373 -106045939 + URR1B DNA MER1_type 2 225 0 5 693 240 163 0 0 chr13 14238470 14238513 -106045799 + CT-rich Low_complexity Low_complexity 3 45 0 5 693 505 180 288 0 chr13 14238520 14238631 -106045681 - B1_Mur4 SINE Alu -6 144 2 5 693 261 379 21 0 chr13 14238724 14238819 -106045493 - PB1 SINE Alu -30 97 1 5 693 441 247 27 7 chr13 14239102 14239249 -106045063 + L1MA9 LINE L1 6162 6311 -1 5 693 16383 145 154 19 chr13 14239546 14244823 -106039489 - Lx LINE L1 0 6654 583 5 693 527 243 9 26 chr13 14244861 14244975 -106039337 - B3 SINE B2 -99 117 6 5 693 22 56 0 0 chr13 14245096 14245132 -106039180 + AT_rich Low_complexity Low_complexity 1 36 0 5 693 26 30 0 0 chr13 14245831 14245864 -106038448 + AT_rich Low_complexity Low_complexity 1 33 0 5 693 21 36 0 0 chr13 14246006 14246034 -106038278 + AT_rich Low_complexity Low_complexity 1 28 0 5 693 763 175 21 42 chr13 14246376 14246519 -106037793 + B1_Mur3 SINE Alu 10 149 0 5 693 202 128 0 25 chr13 14246519 14246559 -106037753 + (CAAA)n Simple_repeat Simple_repeat 4 42 0 5 693 571 176 142 8 chr13 14246660 14246780 -106037532 - B1_Mur4 SINE Alu 0 150 15 5 693 656 252 45 98 chr13 14246807 14247031 -106037281 - B3 SINE B2 -1 215 4 5 693 186 43 0 0 chr13 14247339 14247362 -106036950 + (GGA)n Simple_repeat Simple_repeat 2 24 0 5 693 236 335 92 79 chr13 14248423 14248663 -106035649 + L2c LINE L2 3140 3382 -5 5 693 214 196 107 0 chr13 14249297 14249353 -106034959 + MIRm SINE MIR 215 276 0 5 693 456 275 28 0 chr13 14250376 14250485 -106033827 + PB1D9 SINE Alu 2 113 -7 5 693 345 257 63 18 chr13 14250697 14250808 -106033504 + PB1 SINE Alu 5 120 -7 5 693 836 291 5 15 chr13 14250827 14251029 -106033283 + B4A SINE B4 12 211 -81 5 693 390 267 266 24 chr13 14251103 14251272 -106033040 + B3 SINE B2 1 210 -6 5 693 217 255 0 0 chr13 14251334 14251381 -106032931 + (CATA)n Simple_repeat Simple_repeat 3 49 0 5 693 2090 97 90 0 chr13 14251941 14252240 -106032072 - ORR1A3 LTR MaLR 0 326 1 5 693 326 295 10 21 chr13 14252974 14253071 -106031241 - B1_Mur1 SINE Alu -2 147 52 5 693 711 0 0 0 chr13 14253080 14253159 -106031153 + (TCCC)n Simple_repeat Simple_repeat 3 81 0 5 693 21 36 0 0 chr13 14253418 14253446 -106030866 + AT_rich Low_complexity Low_complexity 1 28 0 5 693 1834 321 103 102 chr13 14254226 14254941 -106029371 - Lx8 LINE L1 -59 7414 6781 5 693 1086 50 43 0 chr13 14254941 14255082 -106029230 - B1_Mus1 SINE Alu 0 148 2 5 693 1834 309 92 91 chr13 14255082 14256004 -106028308 - Lx8 LINE L1 -693 6780 5773 5 693 289 218 0 0 chr13 14256041 14256096 -106028216 + B1F SINE Alu 3 57 -92 5 693 23 0 0 0 chr13 14257730 14257753 -106026559 + AT_rich Low_complexity Low_complexity 1 23 0 5 693 587 325 72 8 chr13 14258789 14259025 -106025287 - Tigger7 DNA MER2_type -2235 256 6 5 693 323 271 102 9 chr13 14259401 14259509 -106024803 + RSINE1 SINE B4 3 120 -45 5 693 387 0 0 0 chr13 14260103 14260146 -106024166 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 5 693 339 140 8 34 chr13 14260157 14260223 -106024089 - B2_Mm2 SINE B2 -102 114 47 5 693 1128 136 11 0 chr13 14260290 14260466 -106023846 - B2_Mm1t SINE B2 -14 179 2 5 693 326 191 86 95 chr13 14260640 14260756 -106023556 - PB1D10 SINE Alu -1 116 2 5 693 346 181 27 14 chr13 14261166 14261239 -106023073 + PB1D10 SINE Alu 36 109 -8 5 693 483 165 24 11 chr13 14261834 14261938 -106022374 - PB1D7 SINE Alu -20 129 23 5 693 230 146 62 0 chr13 14261899 14261947 -106022365 + YREP_Mm Unknown Unknown 255 305 -1507 5 693 300 178 0 0 chr13 14262199 14262272 -106022040 + GA-rich Low_complexity Low_complexity 2 74 0 5 693 884 114 14 28 chr13 14263062 14263206 -106021106 + B1_Mus2 SINE Alu 6 147 0 5 693 180 97 0 0 chr13 14263208 14263239 -106021073 + (A)n Simple_repeat Simple_repeat 1 31 0 5 693 45 34 0 0 chr13 14263754 14263813 -106020499 + AT_rich Low_complexity Low_complexity 1 59 0 5 693 482 283 0 9 chr13 14265677 14265784 -106018528 - B3A SINE B2 -89 109 4 5 693 324 352 50 54 chr13 14265808 14266030 -106018282 + L2 LINE L2 1334 1554 -1865 5 693 207 306 0 44 chr13 14266286 14266399 -106017913 + T-rich Low_complexity Low_complexity 1 108 0 5 693 358 239 76 0 chr13 14267474 14267566 -106016746 - ID_B1 SINE B4 -13 211 113 5 693 621 0 0 0 chr13 14267585 14267654 -106016658 + (TCCCC)n Simple_repeat Simple_repeat 3 71 0 5 693 820 184 14 0 chr13 14267695 14267836 -106016476 - B1_Mur4 SINE Alu -7 143 1 5 693 21 71 0 0 chr13 14267970 14268012 -106016300 + AT_rich Low_complexity Low_complexity 1 42 0 5 693 182 37 37 0 chr13 14268147 14268174 -106016138 + (CTTTG)n Simple_repeat Simple_repeat 2 29 0 5 693 761 178 7 7 chr13 14268175 14268311 -106016001 - B1_Mur1 SINE Alu -13 136 1 5 693 225 0 0 0 chr13 14268349 14268374 -106015938 + (T)n Simple_repeat Simple_repeat 1 25 0 5 693 619 263 10 10 chr13 14269735 14269845 -106014467 - L1MA4 LINE L1 -396 5904 5793 5 693 243 0 0 0 chr13 14269845 14269872 -106014440 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 693 333 0 0 0 chr13 14269872 14269908 -106014404 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 693 619 263 10 10 chr13 14269908 14269992 -106014320 - L1MA4 LINE L1 -508 5792 5710 5 693 328 299 49 0 chr13 14270266 14270375 -106013937 - PB1D7 SINE Alu -6 114 1 6 693 694 230 0 26 chr13 14270389 14270541 -106013771 - B1_Mur1 SINE Alu 0 149 2 6 693 981 117 73 18 chr13 14270638 14270656 -106013656 - B2_Mm1t SINE B2 -19 174 159 6 693 279 0 0 0 chr13 14270656 14270687 -106013625 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 6 693 981 117 73 18 chr13 14270687 14270833 -106013479 - B2_Mm1t SINE B2 -35 158 1 6 693 383 272 39 10 chr13 14270931 14271035 -106013277 + ID_B1 SINE B4 107 213 -11 6 693 235 224 0 0 chr13 14271037 14271086 -106013226 + B1_Mur3 SINE Alu 76 124 -25 6 693 489 287 24 48 chr13 14271429 14271594 -106012718 - RSINE1 SINE B4 -3 162 2 6 693 460 211 78 0 chr13 14271594 14271684 -106012628 - PB1 SINE Alu -9 118 22 6 693 364 236 47 9 chr13 14272284 14272391 -106011921 - B1F SINE Alu -7 142 32 6 693 733 175 43 38 chr13 14272655 14272839 -106011473 - B2_Mm2 SINE B2 -8 187 3 6 693 2187 40 7 11 chr13 14273794 14274073 -106010239 + L1Md_F3 LINE L1 6307 6584 0 6 693 253 275 43 0 chr13 14275201 14275270 -106009042 - MER5A DNA MER1_type -20 169 98 6 693 22 0 0 0 chr13 14275752 14275774 -106008538 + AT_rich Low_complexity Low_complexity 1 22 0 6 693 3324 51 17 0 chr13 14275866 14276275 -106008037 + L1_Mus1 LINE L1 6148 6563 -4 6 693 21 0 0 0 chr13 14276275 14276296 -106008016 + AT_rich Low_complexity Low_complexity 1 21 0 6 693 28 61 0 0 chr13 14276466 14276515 -106007797 + AT_rich Low_complexity Low_complexity 1 49 0 6 693 302 405 30 8 chr13 14276787 14276919 -106007393 + ID_B1 SINE B4 41 175 -49 6 693 424 264 136 111 chr13 14276832 14276994 -106007318 + PB1D10 SINE Alu 7 307 -4 6 693 1102 72 0 0 chr13 14277008 14277147 -106007165 + B1_Mus1 SINE Alu 3 141 -7 6 693 889 229 23 19 chr13 14277408 14277622 -106006690 + B3 SINE B2 2 216 0 6 693 679 90 130 0 chr13 14278055 14278155 -106006157 + B2_Mm2 SINE B2 1 113 -82 6 693 303 28 0 0 chr13 14278177 14278213 -106006099 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6 693 606 219 38 23 chr13 14278324 14278455 -106005857 + B1_Mus2 SINE Alu 2 134 -13 6 693 208 186 0 44 chr13 14278936 14278981 -106005331 + (TGGG)n Simple_repeat Simple_repeat 2 44 0 6 693 555 212 41 68 chr13 14281158 14281305 -106003007 + B1F SINE Alu 6 148 -1 6 693 450 354 0 0 chr13 14281632 14281762 -106002550 + RSINE1 SINE B4 3 132 -33 6 693 895 225 26 10 chr13 14281792 14281985 -106002327 + B3A SINE B2 3 198 0 6 693 210 37 0 0 chr13 14282100 14282127 -106002185 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6 693 21 36 0 0 chr13 14282223 14282251 -106002061 + AT_rich Low_complexity Low_complexity 1 28 0 6 693 378 277 40 0 chr13 14282818 14282919 -106001393 + ID_B1 SINE B4 103 207 -17 6 693 283 291 0 12 chr13 14283293 14283373 -106000939 + ID4 SINE ID 2 80 -3 6 693 623 252 22 0 chr13 14283647 14283782 -106000530 + ID_B1 SINE B4 84 221 -3 6 693 516 208 0 0 chr13 14285402 14285503 -105998809 - BC1_Mm scRNA scRNA -51 101 1 6 693 505 235 150 17 chr13 14286069 14286242 -105998070 + B3A SINE B2 1 196 -2 6 693 1307 90 11 0 chr13 14286251 14286428 -105997884 + B2_Mm1t SINE B2 1 179 -14 6 693 483 109 355 0 chr13 14286460 14286570 -105997742 + B2_Mm2 SINE B2 47 195 0 6 693 375 262 47 28 chr13 14286622 14286728 -105997584 + PB1D7 SINE Alu 1 108 -12 6 86 449 296 37 0 chr13 14286796 14286931 -105997381 - B1F1 SINE Alu -7 142 3 6 694 243 0 0 0 chr13 14286940 14286967 -105997345 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 6 694 618 256 8 0 chr13 14286967 14287100 -105997212 - B1_Mur1 SINE Alu -11 138 5 6 694 370 270 11 33 chr13 14287196 14287288 -105997024 + PB1D10 SINE Alu 23 112 -5 6 694 301 327 0 29 chr13 14287928 14288032 -105996280 + PB1D10 SINE Alu 11 111 -6 6 694 265 208 0 20 chr13 14288259 14288308 -105996004 + B1_Mur1 SINE Alu 91 138 -11 6 694 336 261 84 0 chr13 14288415 14288567 -105995745 - B4 SINE B4 -66 226 1 6 694 405 0 0 0 chr13 14288948 14288993 -105995319 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 694 685 236 71 7 chr13 14289010 14289151 -105995161 - RSINE1 SINE B4 -10 155 6 6 694 192 318 73 29 chr13 14289608 14289676 -105994636 - MIRm SINE MIR -197 79 9 6 694 23 0 0 0 chr13 14290102 14290125 -105994187 + AT_rich Low_complexity Low_complexity 1 23 0 6 694 297 317 19 19 chr13 14292169 14292272 -105992040 + PB1D10 SINE Alu 2 104 -13 6 694 218 301 115 31 chr13 14292276 14292372 -105991940 - PB1 SINE Alu -3 124 21 6 694 433 243 53 2 chr13 14292623 14292722 -105991590 - B1_Mur2 SINE Alu -17 100 2 6 694 330 320 39 23 chr13 14293983 14294111 -105990201 - ID_B1 SINE B4 -16 208 79 6 694 391 242 7 111 chr13 14294113 14294248 -105990064 - PB1 SINE Alu -2 125 5 6 694 319 241 74 18 chr13 14294321 14294429 -105989883 - B1F SINE Alu -16 104 1 6 694 1279 60 21 26 chr13 14294784 14294973 -105989339 - B2_Mm2 SINE B2 -5 190 3 6 694 27 0 0 0 chr13 14295436 14295463 -105988849 + AT_rich Low_complexity Low_complexity 1 27 0 6 694 1934 20 0 113 chr13 14295604 14295887 -105988425 + ORR1A0 LTR MaLR 96 346 0 6 694 311 68 0 0 chr13 14295887 14295931 -105988381 + L1VL1 LINE L1 976 1019 -5403 6 694 585 0 0 0 chr13 14296496 14296561 -105987751 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 6 694 298 230 12 108 chr13 14296577 14296660 -105987652 - PB1D10 SINE Alu -14 103 29 6 694 2754 64 56 3 chr13 14296716 14297091 -105987221 - L1_Mus3 LINE L1 -5 6633 6239 6 694 215 289 90 26 chr13 14297271 14297349 -105986963 - ID4 SINE ID 0 83 1 6 694 222 37 0 0 chr13 14297435 14297462 -105986850 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 694 1110 67 0 0 chr13 14297462 14297596 -105986716 - B1_Mus2 SINE Alu -9 138 5 6 694 289 281 22 22 chr13 14299063 14299154 -105985158 + L2a LINE L2 3334 3424 -2 6 694 2033 43 14 0 chr13 14299381 14299660 -105984652 + MusHAL1 LINE L1 556 838 -1874 6 694 2865 97 12 0 chr13 14299663 14300077 -105984235 + L1_Mm LINE L1 5390 5808 -75 6 694 36277 30 1 0 chr13 14300075 14306914 -105977398 - L1Md_T LINE L1 0 6585 1 6 694 6053 82 34 1 chr13 14306914 14307734 -105976578 + L1_Mus4 LINE L1 5788 6634 -2 6 694 12770 180 91 22 chr13 14308078 14308899 -105975413 + L1_Mur1 LINE L1 2459 3287 -2599 6 694 1571 32 11 0 chr13 14308899 14309085 -105975227 + B2_Mm1a SINE B2 2 189 -4 6 694 12770 180 91 22 chr13 14309085 14311327 -105972985 + L1_Mur1 LINE L1 3288 5734 -152 6 694 283 266 0 15 chr13 14311330 14311395 -105972917 - ID_B1 SINE B4 -7 217 154 6 694 962 203 16 10 chr13 14311589 14311783 -105972529 + B3A SINE B2 3 197 -1 6 694 671 268 39 49 chr13 14311801 14312005 -105972307 + B3 SINE B2 1 202 -14 6 694 1248 162 139 33 chr13 14312005 14312356 -105971956 + MTB_Mm LTR MaLR 1 414 -7 6 694 269 292 105 42 chr13 14312458 14312601 -105971711 - L2 LINE L2 -1038 2381 2230 6 694 666 179 147 32 chr13 14312605 14312761 -105971551 - ORR1D1 LTR MaLR -8 366 193 6 694 216 0 0 0 chr13 14312773 14312797 -105971515 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 694 2847 154 76 92 chr13 14315502 14316123 -105968189 - RMER19C LTR ERVK 0 611 1 6 694 5696 106 13 5 chr13 14316451 14317275 -105967037 - Lx3B LINE L1 -8 6965 6135 6 694 420 97 0 40 chr13 14317279 14317354 -105966958 + RMER1B Other Other 991 1062 -4 6 694 2249 240 191 41 chr13 14317387 14317961 -105966351 - RMER1A Other Other -95 935 248 6 694 360 0 0 0 chr13 14317961 14318001 -105966311 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 694 2249 240 191 41 chr13 14318001 14318239 -105966073 - RMER1A Other Other -783 247 1 6 694 213 65 0 0 chr13 14318239 14318270 -105966042 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 694 303 28 0 0 chr13 14318270 14318305 -105966007 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 694 234 192 0 0 chr13 14319092 14319144 -105965168 + (TAA)n Simple_repeat Simple_repeat 3 54 0 6 694 180 250 0 0 chr13 14319940 14320004 -105964308 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 694 389 268 78 155 chr13 14320220 14320312 -105964000 + Lx8 LINE L1 7157 7238 -235 6 694 689 179 25 105 chr13 14320312 14320474 -105963838 - B1_Mur1 SINE Alu 0 149 1 6 694 389 268 78 155 chr13 14320474 14320503 -105963809 + Lx8 LINE L1 7239 7252 -221 6 694 189 0 0 0 chr13 14320503 14320524 -105963788 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 694 389 268 78 155 chr13 14320524 14320710 -105963602 + Lx8 LINE L1 7253 7441 -32 6 694 208 281 0 30 chr13 14321874 14321940 -105962372 + A-rich Low_complexity Low_complexity 3 66 0 6 694 28 29 0 0 chr13 14324497 14324532 -105959780 + AT_rich Low_complexity Low_complexity 1 35 0 6 694 1117 247 105 7 chr13 14324809 14325103 -105959209 - MTEb LTR MaLR 0 379 57 6 694 719 272 0 5 chr13 14325770 14325955 -105958357 + Lx9 LINE L1 7241 7424 -220 6 694 261 0 0 0 chr13 14326015 14326044 -105958268 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 694 376 183 118 37 chr13 14327832 14327968 -105956344 + MER33 DNA MER1_type 133 279 -45 6 694 262 306 50 75 chr13 14327952 14328072 -105956240 + MT2B LTR ERVL 148 264 -337 6 694 582 221 0 17 chr13 14327988 14328095 -105956217 + B1_Mur1 SINE Alu 32 137 -12 6 694 192 77 0 0 chr13 14328095 14328121 -105956191 + (CAAG)n Simple_repeat Simple_repeat 3 28 0 6 694 252 143 0 0 chr13 14328361 14328403 -105955909 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 694 226 329 68 0 chr13 14328655 14328728 -105955584 + ID2 SINE ID 2 79 -4 7 694 862 272 41 26 chr13 14328760 14329104 -105955208 + L1MB5 LINE L1 5794 6142 -32 7 694 446 33 17 0 chr13 14329289 14329349 -105954963 + (CA)n Simple_repeat Simple_repeat 1 61 0 7 694 1613 171 3 18 chr13 14329567 14329879 -105954433 - Lx2B LINE L1 -149 6909 6508 7 694 257 286 0 0 chr13 14329890 14329981 -105954331 + Lx2B LINE L1 6905 6995 -5 7 694 522 153 10 0 chr13 14329993 14330091 -105954221 + RMER1C Other Other 1243 1341 -1 7 694 511 274 190 5 chr13 14330110 14330315 -105953997 + MLT1A0 LTR MaLR 94 336 -29 7 694 6266 108 3 48 chr13 14330848 14331280 -105953032 + Lx LINE L1 361 759 -5898 7 694 1163 61 0 26 chr13 14331280 14331293 -105953019 - B1_Mm SINE Alu 0 147 138 7 694 414 0 0 0 chr13 14331293 14331339 -105952973 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 7 694 1163 61 0 26 chr13 14331339 14331476 -105952836 - B1_Mm SINE Alu -10 137 1 7 694 6266 108 3 48 chr13 14331476 14331487 -105952825 + Lx LINE L1 760 762 -5895 7 694 918 125 0 0 chr13 14331487 14331631 -105952681 + (TTTC)n Simple_repeat Simple_repeat 3 146 0 7 694 804 104 86 23 chr13 14331631 14331759 -105952553 - B1_Mus1 SINE Alu -12 136 1 7 694 24153 148 17 7 chr13 14331759 14337564 -105946748 + Lx LINE L1 763 6654 0 7 694 203 171 0 0 chr13 14337564 14337605 -105946707 + A-rich Low_complexity Low_complexity 5 45 0 7 694 917 195 20 35 chr13 14338316 14338513 -105945799 - B2_Mm2 SINE B2 0 195 2 7 694 401 111 16 0 chr13 14339316 14339379 -105944933 + B3 SINE B2 1 64 -152 7 694 242 201 66 73 chr13 14339403 14339551 -105944761 + L1MB2 LINE L1 5599 5740 -443 7 694 536 256 56 9 chr13 14339550 14339782 -105944530 + L1MB2 LINE L1 5918 6160 -11 7 694 1112 90 0 0 chr13 14340296 14340440 -105943872 - B1_Mus2 SINE Alu 0 147 4 7 694 244 329 0 47 chr13 14340800 14340886 -105943426 - ID4_ SINE ID 0 83 2 7 694 4071 44 0 4 chr13 14341173 14341672 -105942640 - L1Md_F2 LINE L1 -2 6580 6084 7 694 361 80 0 0 chr13 14341674 14341724 -105942588 + L1_Mm LINE L1 4258 4307 -1576 7 694 198 91 0 0 chr13 14341727 14341760 -105942552 + (T)n Simple_repeat Simple_repeat 1 33 0 7 694 1205 48 0 7 chr13 14341763 14341911 -105942401 - B1_Mm SINE Alu 0 147 1 7 694 287 233 20 100 chr13 14342829 14342929 -105941383 - MTE2a LTR MaLR -134 245 154 7 694 1255 92 48 11 chr13 14343166 14343194 -105941118 - B2_Mm2 SINE B2 -2 193 157 7 694 1221 61 0 0 chr13 14343194 14343357 -105940955 + (TCTA)n Simple_repeat Simple_repeat 4 166 0 7 694 1255 92 48 11 chr13 14343357 14343514 -105940798 - B2_Mm2 SINE B2 -39 156 1 7 694 442 240 10 0 chr13 14343684 14343784 -105940528 + PB1D10 SINE Alu 1 101 -16 7 694 995 282 73 29 chr13 14343787 14344174 -105940138 + MTE2a LTR MaLR 19 417 -2 7 694 21 0 0 0 chr13 14344605 14344626 -105939686 + AT_rich Low_complexity Low_complexity 1 21 0 7 694 665 155 8 0 chr13 14345207 14345336 -105938976 + GA-rich Low_complexity Low_complexity 3 132 0 7 694 210 65 64 21 chr13 14345362 14345409 -105938903 + GA-rich Low_complexity Low_complexity 3 51 0 7 694 8260 128 28 3 chr13 14345805 14348050 -105936262 - Lx LINE L1 -6 6648 4341 7 694 8671 112 46 0 chr13 14348049 14349795 -105934517 + L1_Mur2 LINE L1 2157 4101 -1776 7 694 7549 120 24 29 chr13 14349783 14351463 -105932849 - L1_Mm LINE L1 -616 5267 3903 7 694 7345 125 51 7 chr13 14351458 14352689 -105931623 + Lx2A LINE L1 5713 6998 -10 7 694 4502 48 2 18 chr13 14352700 14353310 -105931002 + MMETn-int LTR ERVK 4245 4844 0 7 694 2592 32 32 3 chr13 14353310 14353623 -105930689 + RLTRETN_Mm LTR ERVK 1 322 0 7 694 1269 284 20 63 chr13 14353623 14354082 -105930230 + Lx7 LINE L1 6179 6617 -1079 7 694 1861 215 74 11 chr13 14354069 14354516 -105929796 + Lx7 LINE L1 6884 7358 -338 7 694 318 156 0 0 chr13 14354541 14354605 -105929707 + CT-rich Low_complexity Low_complexity 2 65 0 7 694 346 119 0 15 chr13 14354605 14354673 -105929639 + Lx7 LINE L1 7356 7422 -274 7 694 8556 103 9 2 chr13 14354748 14356038 -105928274 + L1_Mm LINE L1 4382 5681 -202 7 694 243 0 0 0 chr13 14356801 14356828 -105927484 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 694 329 287 0 11 chr13 14357269 14357364 -105926948 + Lx7 LINE L1 6524 6617 -1079 7 694 11983 97 10 1 chr13 14358772 14360575 -105923737 + L1_Mm LINE L1 3258 5076 -807 7 694 299 127 0 35 chr13 14360565 14360622 -105923690 - L1_Mur1 LINE L1 -743 5143 5089 7 694 1383 67 0 0 chr13 14360623 14360803 -105923509 - L1_Mus1 LINE L1 -163 5720 5541 7 694 6319 68 6 6 chr13 14360796 14361658 -105922654 + L1_Mus1 LINE L1 5712 6654 0 7 694 23 0 0 0 chr13 14361659 14361682 -105922630 + AT_rich Low_complexity Low_complexity 1 23 0 7 694 1454 253 174 8 chr13 14361986 14362601 -105921711 + RCHARR1 DNA MER1_type 89 806 -168 7 694 342 355 29 12 chr13 14362660 14362831 -105921481 - MER58B DNA MER1_type -19 322 149 7 694 372 343 9 0 chr13 14362836 14362941 -105921371 + PB1D10 SINE Alu 1 106 -11 7 694 654 13 0 0 chr13 14363061 14363136 -105921176 + (GA)n Simple_repeat Simple_repeat 1 75 0 7 694 2615 152 12 62 chr13 14363494 14364007 -105920305 + RLTR16 LTR ERVK 1 487 -18 7 694 283 244 0 99 chr13 14364006 14364097 -105920215 + RLTR16 LTR ERVK 424 505 0 7 694 31 0 0 0 chr13 14365003 14365034 -105919278 + AT_rich Low_complexity Low_complexity 1 31 0 7 694 251 256 46 11 chr13 14365210 14365297 -105919015 - RMER15 LTR ERVL -106 469 380 7 694 287 200 0 0 chr13 14365584 14365644 -105918668 + L1M5 LINE L1 5708 5767 -397 7 694 464 290 35 6 chr13 14365716 14365951 -105918361 - L1MA4A LINE L1 -373 5930 5684 7 694 2382 192 29 29 chr13 14366368 14366892 -105917420 + Lx9 LINE L1 6295 6818 -826 7 694 787 189 81 36 chr13 14366903 14367150 -105917162 + Lx9 LINE L1 5115 5372 -475 7 694 2540 140 88 11 chr13 14367163 14367638 -105916674 - RLTR28 LTR ERVL -12 512 1 7 694 1600 197 119 26 chr13 14367638 14368171 -105916141 + Lx9 LINE L1 5368 5968 -1676 7 694 274 303 0 0 chr13 14368251 14368327 -105915985 - Lx5 LINE L1 -424 6626 6551 7 694 445 180 97 16 chr13 14368503 14368627 -105915685 - Lx9 LINE L1 -7 7637 7504 7 694 471 204 0 0 chr13 14368627 14368720 -105915592 + Lx9 LINE L1 6832 6924 -720 7 694 2671 189 112 19 chr13 14368721 14369410 -105914902 + Lx9 LINE L1 6880 7632 -12 7 694 2038 189 77 9 chr13 14369550 14370015 -105914297 + Lx2B LINE L1 6501 6997 -3 7 694 528 16 0 0 chr13 14370209 14370270 -105914042 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 694 2112 284 55 7 chr13 14371208 14371716 -105912596 + Lx8 LINE L1 6575 7100 -373 7 694 189 0 0 0 chr13 14371716 14371737 -105912575 + (CCTA)n Simple_repeat Simple_repeat 2 22 0 7 694 2112 284 55 7 chr13 14371737 14371949 -105912363 + Lx8 LINE L1 7101 7329 -144 7 694 330 312 28 21 chr13 14372073 14372217 -105912095 + B1F2 SINE Alu 5 149 0 7 694 266 244 171 32 chr13 14372455 14372578 -105911734 + B1_Mur2 SINE Alu 2 141 -8 7 694 305 321 121 35 chr13 14373616 14373732 -105910580 + ID_B1 SINE B4 89 214 -10 7 694 429 20 0 0 chr13 14373742 14373792 -105910520 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 7 694 8823 135 31 16 chr13 14375001 14377397 -105906915 - Lx2A1 LINE L1 -13 6995 4563 7 694 1389 253 62 17 chr13 14378025 14378383 -105905929 - MTE2b LTR MaLR -5 374 1 7 694 2044 95 0 0 chr13 14378649 14378943 -105905369 + L1VL4 LINE L1 448 741 -5561 7 694 1898 53 4 0 chr13 14378943 14379187 -105905125 + L1Md_F2 LINE L1 5341 5585 -298 7 694 7112 77 31 8 chr13 14379188 14380160 -105904152 + L1Md_F2 LINE L1 5587 6580 -2 7 694 17059 82 20 10 chr13 14380160 14382388 -105901924 + MusHAL1 LINE L1 529 2773 -580 7 694 2026 156 43 56 chr13 14382388 14382802 -105901510 + RLTR9E LTR ERVK 1 409 0 7 694 17059 82 21 10 chr13 14382802 14383312 -105901000 + MusHAL1 LINE L1 2774 3295 -58 7 694 543 294 47 11 chr13 14383376 14383741 -105900571 + L1M2 LINE L1 4103 4480 -1663 7 694 1386 88 0 51 chr13 14383824 14384039 -105900273 - L1_Mus1 LINE L1 0 6567 6364 7 694 23 54 0 0 chr13 14384043 14384080 -105900232 + AT_rich Low_complexity Low_complexity 1 37 0 7 694 23 0 0 0 chr13 14384351 14384374 -105899938 + AT_rich Low_complexity Low_complexity 1 23 0 7 694 7204 77 1 5 chr13 14384381 14385461 -105898851 - L1_Mus2 LINE L1 -3 6563 5488 7 694 785 244 42 53 chr13 14385725 14386082 -105898230 - L1_Rod LINE L1 -1037 4810 4482 7 694 799 204 10 16 chr13 14386081 14386277 -105898035 + L1_Rod LINE L1 4252 4456 -1427 7 694 308 314 39 24 chr13 14386556 14386683 -105897629 + L2a LINE L2 3296 3424 -2 7 694 974 168 66 35 chr13 14386700 14386928 -105897384 + Lx9 LINE L1 6746 6980 -664 7 694 309 258 15 0 chr13 14387129 14387195 -105897117 + ORR1C2 LTR MaLR 14 80 -294 7 694 1679 206 64 14 chr13 14387246 14387606 -105896706 - ORR1C1 LTR MaLR 0 378 1 7 694 3786 176 134 30 chr13 14387606 14388556 -105895756 - ORR1C1-int LTR MaLR 0 1509 489 7 694 456 196 130 9 chr13 14388544 14388652 -105895660 - ORR1C1 LTR MaLR -273 121 1 7 694 1578 172 19 56 chr13 14388652 14388972 -105895340 + ORR1C2 LTR MaLR 77 384 0 7 694 1017 200 231 8 chr13 14388972 14389214 -105895098 + ORR1D1 LTR MaLR 79 374 0 7 694 999 86 43 0 chr13 14390179 14390319 -105893993 + B1_Mus2 SINE Alu 2 147 0 7 694 210 71 0 0 chr13 14390319 14390347 -105893965 + (A)n Simple_repeat Simple_repeat 1 28 0 7 694 2803 144 70 12 chr13 14391716 14392215 -105892097 + RLTR11A LTR ERVK 1 528 0 7 694 369 0 0 0 chr13 14392285 14392326 -105891986 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 694 381 202 39 63 chr13 14392327 14392454 -105891858 + Lx9 LINE L1 7520 7643 -1 7 694 365 297 112 71 chr13 14392963 14393159 -105891153 + B4 SINE B4 58 261 -31 7 694 240 432 0 0 chr13 14393252 14393347 -105890965 - ID_B1 SINE B4 -49 175 81 7 694 35 0 0 0 chr13 14393347 14393382 -105890930 + AT_rich Low_complexity Low_complexity 1 35 0 7 694 1398 70 0 1 chr13 14393458 14393672 -105890640 - L1_Mur1 LINE L1 -1442 4441 4233 7 694 7407 98 20 0 chr13 14393668 14394825 -105889487 - L1_Mur1 LINE L1 -2664 3222 2043 7 694 8288 98 32 8 chr13 14394833 14396283 -105888029 + Lx3A LINE L1 5478 6967 -14 7 694 378 0 0 0 chr13 14396283 14396325 -105887987 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 7 694 360 0 0 0 chr13 14396997 14397037 -105887275 + (CAA)n Simple_repeat Simple_repeat 2 41 0 7 694 346 346 8 0 chr13 14397158 14397285 -105887027 + Lx8 LINE L1 7039 7166 -307 7 694 285 191 0 14 chr13 14397451 14397520 -105886792 + GA-rich Low_complexity Low_complexity 2 69 0 7 694 851 156 0 8 chr13 14399728 14399857 -105884455 - B3 SINE B2 -88 128 1 7 694 38 75 0 0 chr13 14400034 14400114 -105884198 + AT_rich Low_complexity Low_complexity 1 80 0 7 694 539 145 61 20 chr13 14400114 14400262 -105884050 - Lx9 LINE L1 -8 7636 7483 7 694 24 53 0 0 chr13 14401387 14401425 -105882887 + AT_rich Low_complexity Low_complexity 1 38 0 7 694 733 307 90 16 chr13 14401888 14402209 -105882103 + L2a LINE L2 2541 2885 -534 8 694 795 141 44 0 chr13 14402257 14402392 -105881920 + URR1B DNA MER1_type 85 225 0 8 694 278 340 114 20 chr13 14402521 14402776 -105881536 + L2a LINE L2 3051 3329 -97 8 694 264 245 19 9 chr13 14404221 14404328 -105879984 + GA-rich Low_complexity Low_complexity 1 108 0 8 694 702 254 20 35 chr13 14406100 14406300 -105878012 + RMER5 LTR ERV1 3 199 -335 8 694 916 258 35 120 chr13 14406327 14406701 -105877611 + RMER5 LTR ERV1 193 534 0 8 694 230 262 12 12 chr13 14409137 14409218 -105875094 + CT-rich Low_complexity Low_complexity 3 83 0 8 694 42 36 0 0 chr13 14409792 14409848 -105874464 + AT_rich Low_complexity Low_complexity 1 56 0 8 694 836 236 44 0 chr13 14411524 14411727 -105872585 + MER58B DNA MER1_type 130 341 0 8 694 351 113 0 0 chr13 14412641 14412694 -105871618 + (T)n Simple_repeat Simple_repeat 1 53 0 8 694 228 35 0 0 chr13 14412936 14412965 -105871347 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 694 263 0 81 0 chr13 14413324 14413361 -105870951 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 8 694 386 381 19 22 chr13 14415051 14415322 -105868990 + Lx8 LINE L1 6967 7236 -237 8 694 3763 74 0 0 chr13 14415599 14416085 -105868227 + L1Md_T LINE L1 6097 6582 0 8 694 1640 56 1 1 chr13 14416255 14416482 -105867830 - L1_Mm LINE L1 -686 5614 5384 8 694 1281 206 24 21 chr13 14417522 14417860 -105866452 - Lx9 LINE L1 0 7644 7306 8 86 358 314 35 7 chr13 14417865 14418006 -105866306 + L1_Mur3 LINE L1 5173 5317 -563 8 695 564 15 0 0 chr13 14418006 14418071 -105866241 + (GAAA)n Simple_repeat Simple_repeat 3 67 0 8 695 545 248 139 27 chr13 14418521 14418579 -105865733 + L1_Mur3 LINE L1 846 909 -6819 8 695 291 28 0 0 chr13 14418579 14418615 -105865697 + (CAA)n Simple_repeat Simple_repeat 1 36 0 8 695 545 248 139 27 chr13 14418615 14418888 -105865424 + L1_Mur3 LINE L1 910 1213 -6515 8 695 793 101 15 8 chr13 14418915 14419045 -105865267 + (TTTC)n Simple_repeat Simple_repeat 2 132 0 8 695 1121 69 14 0 chr13 14419047 14419192 -105865120 - B1_Mus2 SINE Alu 0 147 1 8 695 2370 90 6 9 chr13 14419193 14419528 -105864784 - L1_Mus3 LINE L1 -2 6636 6303 8 695 2186 218 29 22 chr13 14419530 14419870 -105864442 + RLTR11A2 LTR ERVK 18 357 -170 8 695 2887 41 3 0 chr13 14419870 14420215 -105864097 - ORR1A0 LTR MaLR 0 346 1 8 695 2186 218 29 22 chr13 14420215 14420366 -105863946 + RLTR11A2 LTR ERVK 358 512 -15 8 695 5268 189 108 17 chr13 14420385 14421831 -105862481 + L1_Mur3 LINE L1 1220 2796 -3084 8 695 4251 159 24 6 chr13 14421883 14422669 -105861643 + Lx2B LINE L1 5877 6676 -324 8 695 8769 53 1 1 chr13 14422788 14423936 -105860376 + L1Md_F2 LINE L1 4439 5586 -297 8 695 7660 69 1 4 chr13 14423936 14424945 -105859367 + L1Md_F2 LINE L1 5587 6582 0 8 695 3306 154 8 0 chr13 14425141 14425737 -105858575 + L1_Mm LINE L1 5060 5660 -223 8 695 22352 157 11 24 chr13 14425754 14427060 -105857252 - Lx2 LINE L1 -397 6600 5289 8 695 834 70 9 0 chr13 14427060 14427175 -105857137 - B1_Mus1 SINE Alu 0 148 33 8 695 22352 157 11 24 chr13 14427175 14431868 -105852444 - Lx2 LINE L1 -397 5288 571 8 695 591 298 87 93 chr13 14431871 14432215 -105852097 + ORR1E LTR MaLR 1 342 -17 8 695 23 0 0 0 chr13 14432459 14432482 -105851830 + AT_rich Low_complexity Low_complexity 1 23 0 8 695 218 75 50 0 chr13 14432678 14432718 -105851594 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 8 695 1075 256 127 6 chr13 14433271 14433601 -105850711 + ORR1D2 LTR MaLR 1 370 0 8 695 1107 265 115 21 chr13 14434403 14434785 -105849527 - MTD LTR MaLR 0 419 2 8 695 829 36 27 0 chr13 14434875 14434987 -105849325 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 8 695 387 60 0 0 chr13 14434987 14435036 -105849276 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 695 445 341 63 0 chr13 14435043 14435169 -105849143 - RSINE1 SINE B4 -26 139 6 8 695 475 242 38 11 chr13 14435630 14435814 -105848498 + RMER17C LTR ERVK 88 276 -134 8 695 3595 35 143 0 chr13 14435844 14436298 -105848014 + MURVY-LTR LTR ERV1 1 519 0 8 695 279 0 0 0 chr13 14436360 14436391 -105847921 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 695 1123 72 0 0 chr13 14436391 14436529 -105847783 - B1_Mm SINE Alu -8 139 2 8 695 529 306 45 45 chr13 14437190 14437392 -105846920 + RMER15 LTR ERVL 220 421 -154 8 695 231 259 0 18 chr13 14437779 14437834 -105846478 - MIR SINE MIR -108 154 101 8 695 1253 272 30 19 chr13 14437890 14438254 -105846058 + ORR1D2 LTR MaLR 3 370 0 8 695 505 231 49 8 chr13 14438555 14438677 -105845635 + ETnERV2-int LTR ERVK 7070 7196 -210 8 695 1674 167 63 41 chr13 14439268 14439631 -105844681 + ORR1C1 LTR MaLR 1 371 -7 8 695 246 207 0 0 chr13 14439986 14440044 -105844268 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 695 1200 122 0 0 chr13 14440048 14440410 -105843902 + (CA)n Simple_repeat Simple_repeat 1 362 0 8 695 24 0 0 0 chr13 14441275 14441299 -105843013 + AT_rich Low_complexity Low_complexity 1 24 0 8 695 314 301 57 19 chr13 14441502 14441607 -105842705 - PB1D10 SINE Alu -7 110 2 8 695 284 309 21 0 chr13 14441746 14441840 -105842472 - MIR SINE MIR -86 176 81 8 695 186 43 0 0 chr13 14441994 14442017 -105842295 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 695 189 0 0 0 chr13 14442398 14442419 -105841893 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 8 695 227 243 0 0 chr13 14442439 14442509 -105841803 + L1_Rod LINE L1 5736 5805 -42 8 695 1233 48 0 0 chr13 14442845 14442992 -105841320 - B1_Mm SINE Alu 0 147 1 8 695 612 312 56 22 chr13 14443706 14443975 -105840337 + B4 SINE B4 2 279 -13 8 695 22 0 0 0 chr13 14444089 14444111 -105840201 + AT_rich Low_complexity Low_complexity 1 22 0 8 695 249 313 127 98 chr13 14444155 14444502 -105839810 + ORR1D1 LTR MaLR 5 361 -13 8 695 183 80 0 0 chr13 14444771 14444796 -105839516 + (CAT)n Simple_repeat Simple_repeat 2 26 0 8 695 917 165 161 73 chr13 14447069 14447317 -105836995 - RMER15 LTR ERVL -68 507 238 8 695 2012 304 33 25 chr13 14447317 14448126 -105836186 + Lx8 LINE L1 6477 7292 -181 8 695 366 221 317 0 chr13 14448157 14448261 -105836051 + B1_Mur3 SINE Alu 1 137 -12 8 695 306 0 0 0 chr13 14448261 14448295 -105836017 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 8 695 545 252 82 0 chr13 14448596 14448731 -105835581 + B1F2 SINE Alu 1 146 -3 8 695 369 0 0 0 chr13 14449182 14449223 -105835089 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 695 301 294 28 55 chr13 14449959 14450112 -105834200 + MIR SINE MIR 39 177 -85 8 695 34 93 0 0 chr13 14450342 14450439 -105833873 + AT_rich Low_complexity Low_complexity 1 97 0 8 695 7554 62 5 0 chr13 14451790 14452947 -105831365 - L1_Mus1 LINE L1 0 6567 5407 8 695 6573 120 37 4 chr13 14454076 14455575 -105828737 + Lx LINE L1 5032 6586 -68 8 695 3374 33 5 0 chr13 14455575 14455969 -105828343 + MTA_Mm LTR MaLR 1 396 0 8 695 6573 102 53 6 chr13 14455969 14456037 -105828275 + Lx LINE L1 6587 6654 0 8 695 883 236 86 136 chr13 14456074 14456471 -105827841 + MTEb LTR MaLR 1 377 -2 8 695 3102 176 51 20 chr13 14457573 14458210 -105826102 - RMER1B Other Other -16 1050 410 8 695 3578 172 66 10 chr13 14458235 14458905 -105825407 + RMER13B LTR ERVK 7 713 -195 8 695 4546 136 17 14 chr13 14458912 14459743 -105824569 - L1_Mur2 LINE L1 -1156 4721 3889 8 695 1733 117 128 6 chr13 14459762 14460081 -105824231 - Lx2 LINE L1 -4 6993 6636 8 695 3911 129 37 24 chr13 14460074 14460836 -105823476 - L1_Mur2 LINE L1 -1996 3881 3110 8 695 279 129 0 0 chr13 14460840 14460889 -105823423 - L1_Mur3 LINE L1 -4010 1870 1821 8 695 814 331 51 17 chr13 14460901 14461196 -105823116 + MTE-int LTR MaLR 31 335 -1245 8 695 274 163 80 22 chr13 14461256 14461394 -105822918 + (TA)n Simple_repeat Simple_repeat 2 147 0 8 695 7095 60 25 18 chr13 14461860 14462849 -105821463 - L1Md_F2 LINE L1 -26 6556 5587 8 695 21 0 0 0 chr13 14464578 14464599 -105819713 + AT_rich Low_complexity Low_complexity 1 21 0 8 695 558 95 0 0 chr13 14464925 14465020 -105819292 + (CA)n Simple_repeat Simple_repeat 2 96 0 8 695 352 226 103 0 chr13 14465026 14465136 -105819176 - L1MA4A LINE L1 -381 5922 5782 8 695 822 73 0 0 chr13 14465151 14465274 -105819038 + (TCTA)n Simple_repeat Simple_repeat 3 125 0 8 695 627 198 7 67 chr13 14465339 14465474 -105818838 - B3 SINE B2 -87 129 3 8 695 545 290 92 19 chr13 14465483 14465867 -105818445 - L1MA4A LINE L1 -520 5777 5359 8 695 363 235 179 32 chr13 14465935 14466058 -105818254 - L1MA4A LINE L1 -1306 4834 4668 8 695 537 235 195 0 chr13 14467108 14467257 -105817055 - MTD LTR MaLR -241 178 1 8 695 7673 95 40 16 chr13 14467365 14468530 -105815782 + Lx3_Mus LINE L1 5812 7003 -6 8 695 205 176 0 0 chr13 14468995 14469029 -105815283 + (CATA)n Simple_repeat Simple_repeat 3 36 0 8 695 1421 159 5 0 chr13 14469230 14469450 -105814862 - URR1B DNA MER1_type -3 222 2 8 695 888 216 48 15 chr13 14469513 14469785 -105814527 + Lx9 LINE L1 7357 7637 -7 8 695 224 254 0 17 chr13 14471841 14471901 -105812411 + (TATG)n Simple_repeat Simple_repeat 4 62 0 8 695 412 287 159 24 chr13 14471919 14472172 -105812140 - B4 SINE B4 -9 283 2 8 695 333 0 0 0 chr13 14472181 14472218 -105812094 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 695 255 103 0 0 chr13 14472617 14472656 -105811656 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 695 28253 102 41 6 chr13 14473118 14479275 -105805037 - L1_Mus1 LINE L1 0 6567 184 8 695 1220 48 0 7 chr13 14479816 14479963 -105804349 - B1_Mus2 SINE Alu -1 146 1 8 695 829 122 13 7 chr13 14480371 14480520 -105803792 + Lx3C LINE L1 5836 5985 -991 8 695 223 167 0 0 chr13 14481124 14481160 -105803152 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 695 32 26 0 0 chr13 14481704 14481743 -105802569 + AT_rich Low_complexity Low_complexity 1 39 0 8 695 378 0 0 0 chr13 14481743 14481785 -105802527 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 695 227 313 222 17 chr13 14481790 14481907 -105802405 - B3 SINE B2 -68 148 8 8 695 328 303 55 29 chr13 14482178 14482416 -105801896 + L1MEf LINE L1 1229 1577 -4901 8 695 1737 231 24 22 chr13 14482620 14483116 -105801196 + L1_Rod LINE L1 3735 4231 -1616 9 695 2057 130 89 3 chr13 14483247 14483595 -105800717 + ORR1C1 LTR MaLR 1 378 0 9 695 2833 195 82 11 chr13 14483595 14484346 -105799966 + ORR1C1-int LTR MaLR 1 941 -568 9 695 2214 326 68 19 chr13 14484392 14485458 -105798854 + Lx8 LINE L1 6268 7385 -88 9 695 941 259 131 29 chr13 14485570 14485785 -105798527 - MTE2a LTR MaLR -41 338 119 9 695 1965 114 36 51 chr13 14485785 14486119 -105798193 + ORR1A4 LTR MaLR 1 329 0 9 695 941 259 131 29 chr13 14486119 14486209 -105798103 - MTE2a LTR MaLR -261 118 2 9 695 226 265 14 29 chr13 14486577 14486647 -105797665 - LTR48 LTR ERV1 -129 658 590 9 695 188 281 59 59 chr13 14487758 14487826 -105796486 + MIRb SINE MIR 17 84 -184 9 695 215 31 31 0 chr13 14488227 14488259 -105796053 + (TTG)n Simple_repeat Simple_repeat 2 34 0 9 695 1267 206 47 7 chr13 14488470 14488744 -105795568 - Lx9 LINE L1 -333 7311 7027 9 695 847 176 18 6 chr13 14488743 14488914 -105795398 + Lx9 LINE L1 7322 7494 -150 9 695 4740 109 1 232 chr13 14489001 14490317 -105793995 + L1Md_F2 LINE L1 4574 5585 -298 9 695 8044 47 2 2 chr13 14490318 14491302 -105793010 + L1Md_F2 LINE L1 5587 6570 -12 9 695 249 130 22 0 chr13 14491304 14491350 -105792962 + L1_Mm LINE L1 5252 5298 -585 9 695 3715 117 79 0 chr13 14491354 14492036 -105792276 + L1Md_F LINE L1 559 1294 -5430 9 695 2734 60 17 50 chr13 14492036 14492439 -105791873 + RLTR10 LTR ERVK 1 390 0 9 695 14059 21 3 1 chr13 14492439 14494118 -105790194 + RLTR10-int LTR ERVK 302 1984 -3 9 695 2725 60 17 50 chr13 14494120 14494522 -105789790 + RLTR10 LTR ERVK 1 389 -1 9 695 395 19 0 0 chr13 14494522 14494574 -105789738 - RLTR10 LTR ERVK -338 52 1 9 695 25087 78 9 6 chr13 14494574 14498220 -105786092 + L1Md_F LINE L1 1289 4945 -938 9 695 351 294 109 12 chr13 14498757 14498922 -105785390 + Zaphod DNA Tip100 320 500 -3531 9 695 276 242 169 27 chr13 14499019 14499202 -105785110 - Charlie1a DNA MER1_type -19 1436 1228 9 695 369 0 0 0 chr13 14499204 14499245 -105785067 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 695 360 212 34 126 chr13 14499304 14499423 -105784889 + B4A SINE B4 185 292 0 9 695 21 0 0 0 chr13 14500462 14500483 -105783829 + AT_rich Low_complexity Low_complexity 1 21 0 1 695 500 265 82 4 chr13 14500633 14500864 -105783448 + L1_Mur3 LINE L1 1318 1566 -4314 2 695 244 152 33 17 chr13 14500961 14501021 -105783291 + L1_Rod LINE L1 2555 2615 -3232 3 695 1650 179 85 15 chr13 14501022 14501352 -105782960 + ORR1D1 LTR MaLR 1 353 -21 4 695 5544 219 30 43 chr13 14501352 14502737 -105781575 + ORR1D1-int LTR MaLR 3 1369 -1 4 695 1681 209 24 14 chr13 14502739 14503108 -105781204 + ORR1D1 LTR MaLR 2 374 0 4 695 3567 178 45 112 chr13 14503132 14504052 -105780260 + RMER13A LTR ERVK 3 860 0 5 695 248 239 0 4 chr13 14504055 14504144 -105780168 + L1_Rod LINE L1 2597 2698 -3149 3 695 1076 269 36 18 chr13 14504159 14504435 -105779877 + ORR1D2 LTR MaLR 82 362 -8 6 695 1855 260 86 14 chr13 14504439 14505239 -105779073 + L1_Mur3 LINE L1 3333 4190 -1690 2 695 28 48 0 0 chr13 14505999 14506041 -105778271 + AT_rich Low_complexity Low_complexity 1 42 0 7 695 24 0 0 0 chr13 14506338 14506362 -105777950 + AT_rich Low_complexity Low_complexity 1 24 0 8 695 9115 167 28 8 chr13 14507680 14509500 -105774812 - L1_Mur3 LINE L1 -193 5687 3833 9 695 13750 135 18 3 chr13 14509494 14512668 -105771644 - Lx LINE L1 -5 6649 3426 1 695 2051 236 101 10 chr13 14512663 14512887 -105771425 + Lx7 LINE L1 5644 5868 -1828 1 695 398 79 16 0 chr13 14512887 14512950 -105771362 + (TA)n Simple_repeat Simple_repeat 2 65 0 1 695 2051 236 101 10 chr13 14512950 14513338 -105770974 + Lx7 LINE L1 5869 6311 -1385 1 695 378 215 73 24 chr13 14513340 14513464 -105770848 + MT2A LTR ERVL 360 489 -44 1 695 227 116 0 44 chr13 14513464 14513509 -105770803 + (TATG)n Simple_repeat Simple_repeat 3 45 0 1 695 254 119 0 56 chr13 14513509 14513580 -105770732 + MT2A LTR ERVL 467 533 0 1 695 301 253 132 0 chr13 14513972 14514055 -105770257 + MTE2b LTR MaLR 248 341 -38 1 695 192 40 0 0 chr13 14514910 14514935 -105769377 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1 695 22 0 0 0 chr13 14515480 14515502 -105768810 + AT_rich Low_complexity Low_complexity 1 22 0 1 695 1479 215 102 9 chr13 14515830 14516145 -105768167 - ORR1D2 LTR MaLR 0 370 27 1 695 423 98 0 0 chr13 14516220 14516281 -105768031 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 695 267 333 63 31 chr13 14516561 14516688 -105767624 + L2a LINE L2 3294 3424 -2 2 695 391 237 26 0 chr13 14519932 14520008 -105764304 + BC1_Mm scRNA scRNA 1 78 -74 2 695 240 86 0 0 chr13 14520008 14520043 -105764269 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 2 695 2895 51 0 26 chr13 14520494 14520878 -105763434 + L1Md_F2 LINE L1 6197 6570 -12 2 695 426 20 0 0 chr13 14521511 14521562 -105762750 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 695 4663 63 5 0 chr13 14522855 14523474 -105760838 - L1_Mm LINE L1 0 5883 5262 2 695 3649 58 46 4 chr13 14523474 14523955 -105760357 + L1Md_F2 LINE L1 6075 6575 -7 2 695 423 287 55 37 chr13 14525983 14526146 -105758166 + RMER15 LTR ERVL 405 570 -5 2 695 1014 274 158 16 chr13 14527314 14527681 -105756631 + MTD LTR MaLR 1 419 0 2 695 793 252 100 25 chr13 14527696 14527856 -105756456 + MTD LTR MaLR 147 321 -98 2 695 1545 194 74 27 chr13 14527856 14528222 -105756090 + ORR1C2 LTR MaLR 2 384 0 3 695 793 252 100 25 chr13 14528222 14528301 -105756011 + MTD LTR MaLR 322 404 -15 2 695 1389 260 134 108 chr13 14528315 14529251 -105755061 + MTD-int LTR MaLR 1 956 -142 2 695 4632 200 45 8 chr13 14529251 14530265 -105754047 + Lx9 LINE L1 6593 7644 0 3 695 278 167 0 16 chr13 14530267 14530328 -105753984 + GA-rich Low_complexity Low_complexity 2 61 0 3 695 1735 203 68 63 chr13 14530650 14531061 -105753251 - MTD LTR MaLR -2 417 5 3 695 333 0 0 0 chr13 14532266 14532303 -105752009 + (TA)n Simple_repeat Simple_repeat 1 37 0 3 695 545 318 34 0 chr13 14532479 14532655 -105751657 - B3A SINE B2 -16 182 1 3 695 28 29 0 0 chr13 14533054 14533089 -105751223 + AT_rich Low_complexity Low_complexity 1 35 0 3 695 284 279 38 0 chr13 14534384 14534463 -105749849 + RMER15 LTR ERVL 423 504 -71 3 695 241 93 0 36 chr13 14534539 14534595 -105749717 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 3 695 376 75 0 56 chr13 14534595 14534666 -105749646 + (CCAA)n Simple_repeat Simple_repeat 2 68 0 3 695 256 292 9 111 chr13 14535100 14535119 -105749193 + MT2B LTR ERVL 148 155 -446 4 695 414 275 11 11 chr13 14535119 14535211 -105749101 + B1_Mur2 SINE Alu 1 92 -57 4 695 243 302 0 59 chr13 14536572 14536674 -105747638 + Tigger5 DNA MER2_type 2296 2391 -15 4 695 225 0 0 0 chr13 14537027 14537052 -105747260 + (T)n Simple_repeat Simple_repeat 1 25 0 4 695 239 250 0 0 chr13 14537052 14537127 -105747185 - B1_Mur3 SINE Alu 0 149 43 4 695 314 417 65 17 chr13 14537324 14537675 -105746637 - L2 LINE L2 -342 3077 2710 4 695 2204 84 3 3 chr13 14537677 14537976 -105746336 + L1_Mus1 LINE L1 6269 6567 0 4 695 29635 71 46 3 chr13 14537982 14543041 -105741271 + L1Md_F3 LINE L1 306 5585 -298 4 695 8313 34 3 1 chr13 14543042 14544037 -105740275 + L1Md_F3 LINE L1 5587 6583 -1 4 695 4900 81 1 51 chr13 14544050 14544816 -105739496 + L1Md_F2 LINE L1 4858 5585 -298 4 695 7244 83 8 11 chr13 14544817 14545803 -105738509 + L1Md_F2 LINE L1 5587 6569 -13 4 695 319 198 0 40 chr13 14545974 14546071 -105738241 - Lx4A LINE L1 -303 6755 6665 4 695 953 127 85 0 chr13 14546385 14546550 -105737762 + B2_Mm2 SINE B2 10 188 -7 5 695 1494 200 0 20 chr13 14546574 14546880 -105737432 + Lx4B LINE L1 6486 6785 -273 5 696 2319 254 88 139 chr13 14550580 14550846 -105733466 - ORR1D2-int LTR MaLR -406 964 649 5 696 1100 43 0 0 chr13 14550846 14550987 -105733325 - L1Md_T LINE L1 0 6582 6442 5 696 2319 254 88 139 chr13 14550987 14551736 -105732576 - ORR1D2-int LTR MaLR -722 648 1 5 696 1089 232 27 71 chr13 14551725 14552142 -105732170 - ORR1D2 LTR MaLR -1 373 1 5 696 686 268 49 22 chr13 14553077 14553265 -105731047 + ID_B1 SINE B4 51 245 -47 5 696 306 106 0 0 chr13 14553269 14553316 -105730996 + (GAAAA)n Simple_repeat Simple_repeat 3 49 0 5 696 361 319 95 6 chr13 14553745 14553903 -105730409 - MIRb SINE MIR -50 218 47 5 696 219 256 0 0 chr13 14554347 14554437 -105729875 + (GGGTG)n Simple_repeat Simple_repeat 3 92 0 5 696 647 84 11 0 chr13 14554640 14554735 -105729577 + (TC)n Simple_repeat Simple_repeat 1 96 0 5 696 2770 251 46 9 chr13 14554785 14555562 -105728750 + MERVL_2A-int LTR ERVL 1 806 -4955 5 696 876 318 41 6 chr13 14555563 14555883 -105728429 - Lx8 LINE L1 -216 7257 6927 6 696 209 222 0 0 chr13 14556532 14556577 -105727735 + T-rich Low_complexity Low_complexity 1 45 0 6 696 6846 114 13 18 chr13 14556578 14557932 -105726380 - Lx LINE L1 -1 6653 5310 6 696 1852 207 72 0 chr13 14558268 14558659 -105725653 - MTD LTR MaLR 0 419 1 6 696 231 36 0 0 chr13 14558926 14558954 -105725358 + (TC)n Simple_repeat Simple_repeat 1 28 0 6 696 4678 75 6 8 chr13 14559000 14559633 -105724679 + L1Md_F2 LINE L1 5939 6570 -12 6 696 1904 225 37 12 chr13 14560136 14560537 -105723775 + MTD LTR MaLR 1 411 -8 6 696 503 69 14 0 chr13 14560598 14560670 -105723642 + (TA)n Simple_repeat Simple_repeat 2 74 0 6 696 351 0 0 0 chr13 14560670 14560708 -105723604 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 696 858 300 11 42 chr13 14562094 14562358 -105721954 - B4A SINE B4 -21 271 16 6 696 250 226 35 62 chr13 14562456 14562569 -105721743 + L1MA6 LINE L1 6064 6173 -127 7 696 1154 167 51 30 chr13 14562697 14562993 -105721319 + RMER17C LTR ERVK 109 410 0 7 696 1486 180 56 34 chr13 14562995 14563317 -105720995 + RMER17C-int LTR ERVK 2 330 -2908 7 696 960 239 95 60 chr13 14563330 14563677 -105720635 - RMER17A2 LTR ERVK -547 359 1 7 696 940 110 0 27 chr13 14563677 14563827 -105720485 + RMER17C-int LTR ERVK 3092 3237 -1 7 696 912 148 241 5 chr13 14563827 14563989 -105720323 + RMER17C LTR ERVK 1 213 -197 7 696 600 62 0 0 chr13 14563989 14564070 -105720242 + (TC)n Simple_repeat Simple_repeat 2 82 0 7 696 912 148 241 5 chr13 14564070 14564131 -105720181 + RMER17C LTR ERVK 214 277 -133 7 696 192 97 0 0 chr13 14564131 14564162 -105720150 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 696 383 343 51 17 chr13 14564311 14564489 -105719823 + MER20 DNA MER1_type 1 184 -35 7 696 295 306 80 96 chr13 14565576 14565764 -105718548 + MLT1C LTR MaLR 52 236 -231 7 696 19696 166 31 18 chr13 14565899 14568979 -105715333 + L1VL2 LINE L1 750 3852 -2034 7 696 225 0 0 0 chr13 14568979 14569004 -105715308 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 696 19696 166 21 19 chr13 14569004 14570507 -105713805 + L1VL2 LINE L1 3853 5371 -515 7 696 4716 130 32 16 chr13 14570507 14571278 -105713034 + Lx2B LINE L1 6217 7000 0 7 696 292 273 61 9 chr13 14571278 14571403 -105712909 + MLT1C LTR MaLR 316 484 -21 7 696 3593 43 0 11 chr13 14571814 14572264 -105712048 - L1Md_F2 LINE L1 0 6582 6138 8 696 275 264 88 117 chr13 14572266 14572403 -105711909 - MLT1A1 LTR MaLR -3 405 273 8 696 768 264 20 41 chr13 14572703 14572718 -105711594 - B3A SINE B2 -3 195 182 8 696 270 0 0 0 chr13 14572718 14572748 -105711564 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 696 815 210 157 4 chr13 14572748 14572929 -105711383 - B3 SINE B2 -24 192 3 8 696 1327 163 18 0 chr13 14573207 14573428 -105710884 - URR1B DNA MER1_type 0 225 1 8 696 522 0 0 0 chr13 14573855 14573913 -105710399 + (CA)n Simple_repeat Simple_repeat 1 58 0 8 696 642 82 0 0 chr13 14573913 14574010 -105710302 + (GA)n Simple_repeat Simple_repeat 2 99 0 8 696 624 310 94 63 chr13 14575357 14575688 -105708624 - MER2 DNA MER2_type -1 344 4 8 696 356 329 38 21 chr13 14575699 14575913 -105708399 + MTE2b LTR MaLR 1 220 -150 8 696 8336 137 25 17 chr13 14575920 14577980 -105706332 - Lx2 LINE L1 0 6997 4904 8 696 6378 86 21 15 chr13 14577995 14578947 -105705365 + Lx LINE L1 5694 6651 -3 9 696 678 135 0 9 chr13 14578964 14579076 -105705236 - Lx2 LINE L1 -1007 4876 4766 8 696 4339 136 33 1 chr13 14579084 14579777 -105704535 + Lx3B LINE L1 6255 6969 -4 9 696 252 0 0 0 chr13 14579926 14579954 -105704358 + (CATA)n Simple_repeat Simple_repeat 2 29 0 9 696 2158 290 54 27 chr13 14580129 14580975 -105703337 + ERVL-B4-int LTR ERVL 1252 2120 -3594 9 696 896 230 32 5 chr13 14580995 14581183 -105703129 + MTE2b LTR MaLR 187 379 0 8 696 243 219 0 0 chr13 14582461 14582502 -105701810 - Tigger5 DNA MER2_type 0 2406 2366 9 696 454 301 72 111 chr13 14582765 14583127 -105701185 + MLT1A0 LTR MaLR 1 348 -17 9 696 413 197 33 66 chr13 14583336 14583458 -105700854 + MTD LTR MaLR 9 134 -287 9 696 508 192 248 27 chr13 14583841 14584022 -105700290 - MTD LTR MaLR -2 417 197 9 696 1133 164 4 131 chr13 14584027 14584279 -105700033 + ORR1A4 LTR MaLR 1 220 -109 9 696 2932 85 5 2 chr13 14585047 14585446 -105698866 + MTB LTR MaLR 1 400 0 9 696 259 374 109 16 chr13 14585814 14586007 -105698305 + MIRb SINE MIR 58 268 0 1 696 435 245 252 0 chr13 14586291 14586597 -105697715 - L1MD3 LINE L1 -16 7979 7597 1 696 678 272 0 7 chr13 14586633 14586781 -105697531 - B1_Mur3 SINE Alu -2 147 1 1 696 1587 189 248 0 chr13 14586822 14587286 -105697026 - Lx9 LINE L1 -5 7639 7061 1 696 318 331 21 57 chr13 14587299 14587440 -105696872 + MER20 DNA MER1_type 24 159 -60 1 696 240 290 19 39 chr13 14587710 14587814 -105696498 + MTE2a LTR MaLR 278 379 0 1 696 203 319 145 13 chr13 14587826 14587985 -105696327 - L4 LINE RTE -77 1952 1773 1 696 1286 165 5 14 chr13 14587988 14588209 -105696103 - URR1A DNA MER1_type 0 226 8 1 696 664 262 21 43 chr13 14588866 14589053 -105695259 + B3A SINE B2 1 183 -15 1 696 22 0 0 0 chr13 14589136 14589158 -105695154 + AT_rich Low_complexity Low_complexity 1 22 0 1 696 367 267 267 35 chr13 14589432 14589743 -105694569 + L1MC3 LINE L1 6880 7262 -523 1 696 348 303 123 5 chr13 14589805 14590017 -105694295 + L1MC3 LINE L1 7319 7555 -230 1 696 22 35 0 0 chr13 14592296 14592325 -105691987 + AT_rich Low_complexity Low_complexity 1 29 0 1 696 387 0 0 0 chr13 14592831 14592874 -105691438 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 696 3132 79 2 0 chr13 14592983 14593414 -105690898 + L1_Mus1 LINE L1 5960 6391 -176 1 696 879 98 0 0 chr13 14593977 14594099 -105690213 - BGLII_A LTR ERVK 0 445 324 1 696 234 0 0 0 chr13 14595982 14596008 -105688304 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1 696 1581 190 92 12 chr13 14598147 14598482 -105685830 - ORR1D1 LTR MaLR -12 362 1 1 696 6154 41 1 8 chr13 14599800 14600558 -105683754 - L1Md_F2 LINE L1 0 6582 5830 1 696 336 176 0 0 chr13 14600677 14600745 -105683567 + (TA)n Simple_repeat Simple_repeat 1 68 0 1 696 253 314 0 0 chr13 14600912 14600982 -105683330 + Lx7 LINE L1 6388 6457 -1239 1 696 2432 264 35 12 chr13 14600968 14601733 -105682579 + Lx7 LINE L1 6564 7346 -350 1 696 198 128 0 0 chr13 14601733 14601772 -105682540 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 1 696 21 36 0 0 chr13 14601804 14601832 -105682480 + AT_rich Low_complexity Low_complexity 1 28 0 1 696 29 28 0 0 chr13 14601889 14601925 -105682387 + AT_rich Low_complexity Low_complexity 1 36 0 1 696 200 105 59 42 chr13 14601925 14602044 -105682268 + (TATAA)n Simple_repeat Simple_repeat 5 125 0 1 696 655 241 93 18 chr13 14602306 14602622 -105681690 + RMER15 LTR ERVL 209 575 0 1 696 432 55 0 0 chr13 14602685 14602740 -105681572 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 696 373 158 0 12 chr13 14603525 14603608 -105680704 - L1Md_F2 LINE L1 0 6582 6501 1 696 31 44 0 0 chr13 14604365 14604410 -105679902 + AT_rich Low_complexity Low_complexity 1 45 0 1 696 204 200 0 0 chr13 14604926 14604971 -105679341 + (CATA)n Simple_repeat Simple_repeat 2 46 0 1 696 1324 93 22 0 chr13 14605567 14605749 -105678563 - B2_Mm2 SINE B2 -9 186 1 1 696 5031 113 57 19 chr13 14605766 14606577 -105677735 + Lx2 LINE L1 6156 6997 0 1 696 21 0 0 0 chr13 14606985 14607006 -105677306 + AT_rich Low_complexity Low_complexity 1 21 0 1 696 701 207 168 0 chr13 14607143 14607322 -105676990 - B3 SINE B2 -7 209 1 1 696 207 100 0 0 chr13 14608234 14608264 -105676048 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 696 275 260 43 104 chr13 14608367 14608530 -105675782 - MER4B-int LTR ERV1 -6554 204 52 1 696 1517 233 95 76 chr13 14608580 14609104 -105675208 - RMER5 LTR ERV1 0 534 1 1 696 656 228 59 78 chr13 14609212 14609431 -105674881 - ID_B1 SINE B4 -8 216 2 1 696 828 111 0 0 chr13 14611280 14611406 -105672906 + (GAA)n Simple_repeat Simple_repeat 1 126 0 1 696 197 320 68 117 chr13 14612139 14612344 -105671968 - L2c LINE L2 -4 3383 3189 1 696 211 282 90 0 chr13 14613015 14613093 -105671219 - MIR3 SINE MIR -12 196 112 1 696 612 40 0 0 chr13 14615551 14615626 -105668686 + (TA)n Simple_repeat Simple_repeat 2 76 0 1 696 32 26 0 0 chr13 14617117 14617156 -105667156 + AT_rich Low_complexity Low_complexity 1 39 0 1 696 1094 279 89 55 chr13 14617228 14617721 -105666591 - Lx9 LINE L1 -192 7452 6943 1 696 330 230 66 57 chr13 14617864 14617970 -105666342 + B3 SINE B2 109 215 -1 1 696 36 23 0 0 chr13 14618217 14618260 -105666052 + AT_rich Low_complexity Low_complexity 1 43 0 1 696 700 272 35 160 chr13 14618703 14618887 -105665425 - Lx7 LINE L1 -761 6935 6760 1 696 1205 23 15 0 chr13 14618887 14619020 -105665292 + B1_Mus1 SINE Alu 1 135 -13 1 696 304 0 87 0 chr13 14619020 14619066 -105665246 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1 696 700 272 35 160 chr13 14619066 14619161 -105665151 - Lx7 LINE L1 -937 6759 6695 1 696 1611 43 27 0 chr13 14619161 14619348 -105664964 - B2_Mm1a SINE B2 -1 192 1 1 696 700 285 40 117 chr13 14619348 14619518 -105664794 - Lx7 LINE L1 -811 6833 6561 1 696 318 290 139 59 chr13 14619683 14619870 -105664442 - MLT1H LTR MaLR -319 230 29 1 696 5620 53 0 0 chr13 14620081 14620728 -105663584 - L1Md_F2 LINE L1 -13 6569 5923 1 696 2348 250 23 29 chr13 14620876 14621481 -105662831 - Lx6 LINE L1 -1035 6425 5829 1 696 1497 252 74 17 chr13 14621484 14621903 -105662409 + MERVL_2A-int LTR ERVL 477 919 -4842 1 696 3689 159 21 11 chr13 14621905 14622528 -105661784 + MERVL_2A-int LTR ERVL 1292 1920 -3841 1 696 5997 236 58 22 chr13 14622520 14623904 -105660408 + MERVL_2A-int LTR ERVL 2131 3564 -2197 1 696 2674 218 70 24 chr13 14623946 14624542 -105659770 + MERVL_2A-int LTR ERVL 3730 4353 -1408 1 696 614 241 7 0 chr13 14624576 14624721 -105659591 + Lx6 LINE L1 6973 7118 -342 1 696 285 81 0 0 chr13 14624723 14624760 -105659552 + Lx6 LINE L1 7082 7118 -342 1 696 268 108 0 0 chr13 14624762 14624799 -105659513 + Lx6 LINE L1 7082 7118 -342 1 696 258 108 0 0 chr13 14624801 14624838 -105659474 + Lx6 LINE L1 7082 7118 -342 1 696 294 54 0 0 chr13 14624840 14624877 -105659435 + Lx6 LINE L1 7082 7118 -342 1 696 294 54 0 0 chr13 14624879 14624916 -105659396 + Lx6 LINE L1 7082 7118 -342 1 696 278 81 0 0 chr13 14624918 14624955 -105659357 + Lx6 LINE L1 7082 7118 -342 1 696 268 108 0 0 chr13 14624957 14624994 -105659318 + Lx6 LINE L1 7082 7118 -342 1 696 262 114 0 0 chr13 14624998 14625033 -105659279 + Lx6 LINE L1 7084 7118 -342 1 696 294 54 0 0 chr13 14625035 14625072 -105659240 + Lx6 LINE L1 7082 7118 -342 1 696 873 284 17 8 chr13 14625074 14625312 -105659000 + Lx6 LINE L1 7082 7321 -139 1 696 7265 72 1 33 chr13 14625318 14625848 -105658464 - L1_Mus1 LINE L1 0 6567 6052 1 696 191 61 30 0 chr13 14625848 14625881 -105658431 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1 696 1172 78 0 0 chr13 14625883 14626024 -105658288 - B1_Mm SINE Alu -6 141 1 1 696 31735 116 23 11 chr13 14626024 14632045 -105652267 - L1_Mus1 LINE L1 -516 6051 98 1 696 620 245 7 7 chr13 14632056 14632208 -105652104 + Lx6 LINE L1 7309 7460 0 1 696 298 389 8 0 chr13 14632342 14632468 -105651844 - MIR SINE MIR -120 142 16 1 696 2736 240 96 51 chr13 14632741 14633802 -105650510 + Lx9 LINE L1 4120 5228 -619 1 696 787 212 182 16 chr13 14634100 14634287 -105650025 + ID_B1 SINE B4 3 220 -4 1 696 244 208 55 36 chr13 14634238 14634293 -105650019 + PB1D7 SINE Alu 65 120 0 1 696 199 298 0 0 chr13 14634492 14634539 -105649773 - MIR3 SINE MIR -49 159 113 1 696 585 212 0 43 chr13 14634996 14635134 -105649178 + Lx9 LINE L1 5475 5606 -241 1 696 235 371 27 27 chr13 14635550 14635697 -105648615 + LTRIS_Mus LTR ERV1 393 539 -48 1 696 1175 246 85 36 chr13 14635718 14636165 -105648147 + Lx9 LINE L1 5637 6105 -1539 1 696 1978 203 52 8 chr13 14636352 14636754 -105647558 + RMER4B LTR ERVK 15 434 -151 1 696 249 167 0 57 chr13 14637870 14637940 -105646372 + (TTTG)n Simple_repeat Simple_repeat 2 67 0 1 696 590 49 0 24 chr13 14637953 14638036 -105646276 + (TTTTG)n Simple_repeat Simple_repeat 5 85 0 1 696 369 149 330 31 chr13 14638037 14638134 -105646178 - B1_Mur3 SINE Alu -13 136 11 1 696 1628 344 94 123 chr13 14638148 14638906 -105645406 - MTE-int LTR MaLR -132 1448 620 1 696 402 259 36 27 chr13 14638906 14639017 -105645295 - PB1D7 SINE Alu -6 114 3 1 696 1628 344 94 123 chr13 14639017 14639133 -105645179 - MTE-int LTR MaLR -961 619 537 1 696 427 212 12 0 chr13 14639133 14639213 -105645099 - ID2 SINE ID 0 83 3 1 696 1628 344 94 123 chr13 14639213 14639778 -105644534 - MTE-int LTR MaLR -1044 536 50 1 696 227 289 78 17 chr13 14640100 14640216 -105644096 - L1_Rod LINE L1 -6734 438 316 1 696 458 298 35 76 chr13 14640718 14640889 -105643423 + RSINE1 SINE B4 2 165 0 1 696 21 36 0 0 chr13 14641287 14641315 -105642997 + AT_rich Low_complexity Low_complexity 1 28 0 1 696 202 250 0 68 chr13 14641333 14641406 -105642906 + CT-rich Low_complexity Low_complexity 5 72 0 1 696 232 372 10 0 chr13 14641408 14641510 -105642802 - PB1 SINE Alu -4 123 21 1 696 356 284 81 35 chr13 14641547 14641913 -105642399 - L1ME3B LINE L1 -10 6163 5742 1 696 936 236 49 85 chr13 14642962 14643327 -105640985 + Lx7 LINE L1 866 1217 -6511 1 696 3394 253 44 63 chr13 14643351 14644352 -105639960 + Lx7 LINE L1 6432 7413 -283 1 696 449 205 44 9 chr13 14644388 14644501 -105639811 + Lx7 LINE L1 7564 7680 -16 1 696 462 254 78 23 chr13 14645550 14645679 -105638633 + RSINE1 SINE B4 2 137 -28 1 696 599 203 122 34 chr13 14646191 14646339 -105637973 - RSINE1 SINE B4 0 165 5 1 696 1174 149 159 0 chr13 14646358 14646553 -105637759 - URR1A DNA MER1_type 0 226 1 1 696 576 235 25 0 chr13 14646622 14646741 -105637571 + B1_Mus1 SINE Alu 18 139 -9 1 696 182 37 37 0 chr13 14647849 14647876 -105636436 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1 696 651 46 0 0 chr13 14648160 14648247 -105636065 + (GTTTG)n Simple_repeat Simple_repeat 3 89 0 1 696 275 289 65 82 chr13 14648349 14648519 -105635793 - RLTR25A LTR ERVK -1 1102 936 1 696 305 173 28 37 chr13 14648642 14648750 -105635562 + (CA)n Simple_repeat Simple_repeat 1 107 0 1 696 2230 159 90 7 chr13 14648862 14649273 -105635039 - BGLII_A LTR ERVK 0 445 1 1 696 1304 18 24 0 chr13 14649859 14650196 -105634116 + (CTGTG)n Simple_repeat Simple_repeat 1 344 0 1 696 342 0 0 0 chr13 14651171 14651209 -105633103 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 696 683 324 63 33 chr13 14651687 14652057 -105632255 + Lx7 LINE L1 5592 5940 -1756 1 696 441 0 0 0 chr13 14653393 14653442 -105630870 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 696 2016 148 141 30 chr13 14654269 14654666 -105629646 + RMER10A LTR ERVL 2 442 0 1 696 398 20 0 19 chr13 14654721 14654773 -105629539 + (TAA)n Simple_repeat Simple_repeat 2 52 0 1 696 610 290 29 6 chr13 14655610 14655780 -105628532 - B3A SINE B2 -23 175 2 1 696 803 304 45 9 chr13 14655780 14656112 -105628200 + RMER5 LTR ERV1 191 534 0 1 696 7854 27 2 0 chr13 14656123 14657044 -105627268 + L1_Mm LINE L1 3239 4161 -1722 1 696 38189 25 3 7 chr13 14657039 14662446 -105621866 + L1Md_T LINE L1 204 5585 -298 1 696 9054 32 0 0 chr13 14662447 14663442 -105620870 + L1Md_T LINE L1 5587 6581 -1 1 696 1864 246 17 34 chr13 14664331 14664744 -105619568 - MTD LTR MaLR -12 407 2 1 696 272 274 27 0 chr13 14665724 14665797 -105618515 - ORR1E LTR MaLR -234 125 51 1 696 607 295 0 0 chr13 14666071 14666193 -105618119 + B1_Mur1 SINE Alu 1 122 -27 2 696 285 299 53 87 chr13 14666073 14666223 -105618089 + MT2B LTR ERVL 167 311 -290 2 696 18351 148 45 33 chr13 14666428 14668325 -105615987 + L1_Mur1 LINE L1 367 2614 -3272 2 696 345 47 0 0 chr13 14668325 14668368 -105615944 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 696 18351 136 46 35 chr13 14668368 14669041 -105615271 + L1_Mur1 LINE L1 2615 3281 -2605 2 696 1115 90 0 20 chr13 14669041 14669189 -105615123 + B1_Mm SINE Alu 2 146 -1 2 696 18351 136 46 35 chr13 14669189 14669248 -105615064 + L1_Mur1 LINE L1 3282 3288 -2598 2 696 7871 55 1 4 chr13 14669248 14670234 -105614078 + L1Md_F2 LINE L1 5587 6569 -13 2 696 18351 136 46 35 chr13 14670234 14670938 -105613374 + L1_Mur1 LINE L1 3289 3962 -1924 2 696 3058 82 0 5 chr13 14670938 14671340 -105612972 - MTB LTR MaLR 0 400 1 2 696 18351 136 46 35 chr13 14671340 14672248 -105612064 + L1_Mur1 LINE L1 3963 4917 -969 2 696 510 268 64 21 chr13 14672321 14672508 -105611804 + Lx8 LINE L1 6219 6413 -1060 2 696 184 337 66 19 chr13 14673042 14673148 -105611164 + L3 LINE CR1 4119 4229 -260 2 696 1511 190 142 31 chr13 14673610 14673926 -105610386 + Lx9 LINE L1 7149 7507 -137 2 696 186 43 0 0 chr13 14673926 14673949 -105610363 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 696 1511 190 142 31 chr13 14673949 14674077 -105610235 + Lx9 LINE L1 7508 7641 -3 2 696 433 326 171 0 chr13 14674500 14674739 -105609573 + RMER15 LTR ERVL 296 575 0 2 696 514 346 70 5 chr13 14675408 14675623 -105608689 - MLT1F1 LTR MaLR -19 550 322 2 696 1033 269 30 51 chr13 14675623 14675956 -105608356 - RMER15 LTR ERVL 0 575 250 2 696 245 404 37 0 chr13 14676153 14676262 -105608050 - MLT1F1 LTR MaLR -274 274 162 2 696 232 409 18 0 chr13 14676296 14676406 -105607906 - MLT1F1 LTR MaLR -381 188 77 2 696 1317 0 34 0 chr13 14677317 14677582 -105606730 + (CACAG)n Simple_repeat Simple_repeat 1 274 0 2 696 1176 100 24 0 chr13 14678526 14678696 -105605616 + B2_Mm1t SINE B2 1 174 -19 2 696 246 120 313 20 chr13 14678717 14678833 -105605479 + B2_Mm2 SINE B2 46 195 0 2 696 475 275 173 43 chr13 14678958 14679421 -105604891 - RLTR12B LTR ERVK 0 528 3 2 696 270 333 82 20 chr13 14679500 14679647 -105604665 + MLT1J1 LTR MaLR 5 160 -284 2 10 864 268 45 97 chr13 14679975 14680355 -105603957 - MTEa LTR MaLR -13 366 7 2 697 415 200 5 84 chr13 14680429 14680620 -105603692 + GA-rich Low_complexity Low_complexity 2 177 0 2 697 1533 176 26 136 chr13 14680797 14681186 -105603126 - ORR1B1 LTR MaLR -8 386 41 2 697 250 237 50 43 chr13 14681746 14681887 -105602425 + L1MC3 LINE L1 6979 7120 -665 2 697 236 121 0 0 chr13 14682065 14682098 -105602214 - tRNA-Lys-AAG tRNA tRNA -39 37 5 2 697 312 289 0 0 chr13 14682354 14682562 -105601750 + (TG)n Simple_repeat Simple_repeat 1 208 0 2 697 411 244 0 0 chr13 14682586 14682717 -105601595 + (TG)n Simple_repeat Simple_repeat 2 132 0 2 697 284 288 9 9 chr13 14682720 14682825 -105601487 + (TATATG)n Simple_repeat Simple_repeat 6 110 0 2 697 385 286 0 0 chr13 14682831 14682908 -105601404 - ID SINE ID -145 79 3 2 697 540 241 53 40 chr13 14683698 14683849 -105600463 - MER21B LTR ERV1 -131 732 580 2 697 1458 296 62 11 chr13 14683889 14684360 -105599952 + RMER5 LTR ERV1 37 531 -3 2 697 3255 145 11 105 chr13 14684543 14685265 -105599047 + RMER6A LTR ERVK 57 756 0 2 697 322 335 0 86 chr13 14685745 14685885 -105598427 + ID_B1 SINE B4 71 194 -30 2 697 1200 225 81 105 chr13 14685916 14686503 -105597809 - RLTR31_Mur LTR ERVK -16 537 27 2 697 300 320 0 0 chr13 14686589 14686664 -105597648 + ID4_ SINE ID 2 76 -7 2 697 423 0 0 0 chr13 14688176 14688223 -105596089 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 2 697 244 240 20 0 chr13 14688600 14688650 -105595662 + MER21B LTR ERV1 120 170 -693 2 697 422 268 246 0 chr13 14689065 14689203 -105595109 - ORR1D2 LTR MaLR -198 172 1 2 697 3757 145 39 32 chr13 14689507 14690199 -105594113 + RMER6A LTR ERVK 60 756 0 2 697 193 302 47 16 chr13 14690402 14690466 -105593846 + MIRb SINE MIR 157 222 -46 2 697 1479 121 0 13 chr13 14690648 14690874 -105593438 - Lx2 LINE L1 0 6997 6775 2 697 8934 119 32 13 chr13 14690874 14692044 -105592268 - Lx2 LINE L1 -354 6643 5465 2 697 5387 48 0 3 chr13 14692044 14692706 -105591606 - L1Md_F2 LINE L1 0 6582 5923 2 697 8934 155 22 10 chr13 14692706 14693850 -105590462 - Lx2 LINE L1 -422 5464 4295 2 697 1279 108 16 0 chr13 14693850 14694036 -105590276 - B2_Mm2 SINE B2 -6 189 1 2 697 8934 155 22 10 chr13 14694036 14694147 -105590165 - Lx2 LINE L1 -1592 4294 4182 2 697 268 43 65 0 chr13 14694145 14694191 -105590121 + L1_Mm LINE L1 4122 4170 -1713 2 697 1583 37 0 21 chr13 14694889 14695083 -105589229 - B2_Mm1t SINE B2 -2 191 2 2 697 306 352 15 20 chr13 14695092 14695295 -105589017 + L2 LINE L2 1831 2032 -1387 2 697 422 276 94 29 chr13 14695363 14695501 -105588811 - B3A SINE B2 -38 160 14 2 697 396 0 0 0 chr13 14696206 14696250 -105588062 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 697 904 302 54 0 chr13 14696308 14696530 -105587782 + MTD LTR MaLR 150 383 -36 2 697 633 196 108 24 chr13 14696553 14696720 -105587592 + MTC-int LTR MaLR 1 181 -1077 2 697 246 175 0 0 chr13 14697290 14697330 -105586982 + MTD LTR MaLR 94 133 -286 2 697 1405 208 93 0 chr13 14697361 14697683 -105586629 + MERVL_2A-int LTR ERVL 2182 2533 -3228 2 697 493 265 77 0 chr13 14697829 14697946 -105586366 - B1_Mur1 SINE Alu -23 126 1 2 697 622 264 0 26 chr13 14698170 14698322 -105585990 - B1_Mur3 SINE Alu -1 148 1 2 697 195 129 0 0 chr13 14698795 14698826 -105585486 + (T)n Simple_repeat Simple_repeat 1 31 0 2 697 4089 44 0 2 chr13 14698924 14699422 -105584890 - L1Md_A LINE L1 -1 6581 6085 2 697 242 260 235 20 chr13 14699570 14699672 -105584640 - RSINE1 SINE B4 -41 124 1 2 697 396 308 16 48 chr13 14700497 14700623 -105583689 - MER20 DNA MER1_type -94 125 4 2 697 917 219 214 3 chr13 14701658 14701947 -105582365 + RMER1B Other Other 364 713 -353 2 697 237 111 167 45 chr13 14701996 14702036 -105582276 + RMER1A Other Other 953 996 -34 2 697 252 0 0 0 chr13 14702036 14702064 -105582248 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 697 237 111 167 45 chr13 14702064 14702089 -105582223 + RMER1A Other Other 997 1025 -5 2 697 185 0 40 0 chr13 14702354 14702379 -105581933 + (TTTTTG)n Simple_repeat Simple_repeat 4 29 0 2 697 436 217 104 0 chr13 14702379 14702485 -105581827 - PB1D9 SINE Alu 0 120 4 2 697 228 303 29 39 chr13 14702397 14702500 -105581812 - MT2B LTR ERVL -346 255 154 2 697 189 0 0 0 chr13 14703162 14703183 -105581129 + (A)n Simple_repeat Simple_repeat 1 21 0 2 697 524 271 60 0 chr13 14703984 14704135 -105580177 - RSINE1 SINE B4 -2 163 4 2 697 333 172 17 0 chr13 14704841 14704899 -105579413 + B1F SINE Alu 61 119 -30 2 697 252 0 0 0 chr13 14704911 14704939 -105579373 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 2 697 292 149 21 0 chr13 14704939 14704986 -105579326 + B1F SINE Alu 72 119 -30 2 697 500 68 14 0 chr13 14704998 14705071 -105579241 + (TAAA)n Simple_repeat Simple_repeat 3 76 0 2 697 6326 38 0 1 chr13 14706333 14707092 -105577220 - L1Md_T LINE L1 0 6582 5825 2 697 441 278 150 10 chr13 14707567 14707760 -105576552 - ID_B1 SINE B4 -3 221 2 2 697 25 0 0 0 chr13 14708847 14708872 -105575440 + AT_rich Low_complexity Low_complexity 1 25 0 2 697 4123 48 0 21 chr13 14709710 14710224 -105574088 + RLTR1C LTR ERV1 1 503 0 2 697 1818 225 76 21 chr13 14710458 14710890 -105573422 - MT2A LTR ERVL -77 456 1 2 697 725 247 109 0 chr13 14711179 14711353 -105572959 - B3 SINE B2 -23 193 1 2 697 229 388 0 10 chr13 14711867 14711966 -105572346 + ID_B1 SINE B4 79 176 -48 2 697 404 306 20 0 chr13 14711882 14711980 -105572332 + PB1D10 SINE Alu 10 109 -8 2 697 698 237 107 5 chr13 14712187 14712374 -105571938 - B3 SINE B2 -8 208 3 2 697 252 143 0 0 chr13 14713381 14713423 -105570889 + (T)n Simple_repeat Simple_repeat 1 42 0 2 697 1331 68 5 45 chr13 14713729 14713928 -105570384 - B2_Mm2 SINE B2 -3 192 2 2 697 259 276 40 20 chr13 14714344 14714444 -105569868 - RCHARR1 DNA MER1_type -1 973 872 2 697 534 129 0 0 chr13 14714510 14714595 -105569717 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 697 1480 197 95 15 chr13 14714595 14714986 -105569326 - RCHARR1 DNA MER1_type -151 823 402 2 697 508 294 73 124 chr13 14715009 14715163 -105569149 - RCHARR1 DNA MER1_type -697 277 135 2 697 1241 27 7 0 chr13 14715163 14715309 -105569003 - B1_Mus1 SINE Alu 0 148 2 2 697 508 294 73 124 chr13 14715309 14715387 -105568925 - RCHARR1 DNA MER1_type -840 134 57 2 697 180 176 0 0 chr13 14715608 14715642 -105568670 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 2 697 430 266 11 0 chr13 14716001 14716095 -105568217 - RCHARR1 DNA MER1_type -813 161 67 2 697 774 50 0 0 chr13 14716098 14716197 -105568115 - B1_Mus2 SINE Alu -48 99 1 2 697 1158 84 55 27 chr13 14716216 14716399 -105567913 - B2_Mm1t SINE B2 -5 188 1 2 697 669 230 7 7 chr13 14716692 14716832 -105567480 + B1F SINE Alu 10 149 0 2 697 417 311 93 21 chr13 14718783 14718977 -105565335 - B4A SINE B4 -81 211 4 2 697 891 271 21 0 chr13 14719006 14719194 -105565118 + B3 SINE B2 1 192 -24 2 697 238 164 33 0 chr13 14719293 14719354 -105564958 + T-rich Low_complexity Low_complexity 2 64 0 2 697 599 214 54 48 chr13 14719381 14719502 -105564810 + URR1B DNA MER1_type 1 128 -97 2 697 1331 72 44 6 chr13 14719502 14719684 -105564628 + B2_Mm2 SINE B2 1 189 -6 2 697 599 214 54 48 chr13 14719684 14719709 -105564603 + URR1B DNA MER1_type 129 148 -77 2 697 183 42 0 0 chr13 14719781 14719805 -105564507 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 697 588 204 71 21 chr13 14719907 14720047 -105564265 + B1_Mur4 SINE Alu 2 148 -2 2 697 397 247 0 31 chr13 14720899 14720995 -105563317 - U6 snRNA snRNA -14 93 1 2 697 24 53 0 0 chr13 14721044 14721082 -105563230 + AT_rich Low_complexity Low_complexity 1 38 0 2 697 261 0 0 0 chr13 14721914 14721943 -105562369 + (T)n Simple_repeat Simple_repeat 1 29 0 2 697 865 179 0 20 chr13 14723087 14723235 -105561077 + B1_Mur3 SINE Alu 3 147 -2 2 697 293 284 74 0 chr13 14723526 14723621 -105560691 - Lx8 LINE L1 -182 7291 7190 2 697 890 271 89 37 chr13 14723686 14724035 -105560277 - Lx8 LINE L1 -459 7014 6648 2 697 342 0 0 0 chr13 14724047 14724085 -105560227 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 697 1568 156 39 60 chr13 14724086 14724469 -105559843 - RMER17C LTR ERVK -35 375 1 2 697 1265 272 76 22 chr13 14724469 14724931 -105559381 - Lx8 LINE L1 -824 6649 6163 2 697 1424 255 36 22 chr13 14725107 14725604 -105558708 - L1_Mur3 LINE L1 -630 5250 4747 3 697 2349 95 35 0 chr13 14725661 14725976 -105558336 - ORR1A2 LTR MaLR 0 327 2 3 697 2366 118 25 32 chr13 14725976 14726380 -105557932 - ORR1A2-int LTR MaLR 0 1963 1563 3 697 2271 141 14 3 chr13 14726354 14726718 -105557594 - ORR1A2-int LTR MaLR -1595 368 1 3 697 2324 120 3 0 chr13 14726718 14727044 -105557268 - ORR1A2 LTR MaLR 0 327 1 3 697 812 227 99 30 chr13 14727046 14727350 -105556962 - L1_Mur3 LINE L1 -1165 4715 4391 3 697 281 306 81 64 chr13 14727467 14727701 -105556611 - Lx7 LINE L1 -384 7312 7075 3 697 189 0 0 0 chr13 14728532 14728553 -105555759 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 697 23 33 0 0 chr13 14730655 14730685 -105553627 + AT_rich Low_complexity Low_complexity 1 30 0 3 697 1837 195 30 16 chr13 14730822 14731192 -105553120 - MTC LTR MaLR -46 375 1 3 697 997 184 85 24 chr13 14731854 14732066 -105552246 + URR1B DNA MER1_type 1 225 0 3 697 256 163 0 0 chr13 14733149 14733192 -105551120 + RLTR30 LTR ERV1 101 143 -236 3 697 1033 138 6 33 chr13 14733193 14733364 -105550948 - URR1A DNA MER1_type 0 226 61 3 697 2619 205 30 60 chr13 14733364 14733997 -105550315 + RLTR17 LTR ERVK 1 614 -78 3 697 322 220 0 0 chr13 14734007 14734057 -105550255 - URR1A DNA MER1_type -176 50 1 3 697 975 143 103 0 chr13 14734068 14734243 -105550069 + RLTR30 LTR ERV1 181 373 -6 3 697 228 259 136 80 chr13 14734576 14734664 -105549648 + RSINE1 SINE B4 73 165 0 3 697 315 0 0 0 chr13 14734667 14734702 -105549610 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 697 1020 53 0 77 chr13 14734706 14734849 -105549463 + B1_Mus1 SINE Alu 5 136 -12 3 697 305 317 53 48 chr13 14735315 14735504 -105548808 + RMER15 LTR ERVL 352 541 -34 3 697 211 50 24 48 chr13 14735758 14735800 -105548512 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 3 697 3727 62 2 4 chr13 14735806 14736280 -105548032 - L1_Mus1 LINE L1 -1 6566 6094 3 697 7385 108 68 12 chr13 14736923 14738079 -105546233 - Lx3_Mus LINE L1 -7 7002 5783 3 697 2332 135 34 52 chr13 14738078 14738516 -105545796 - Lx LINE L1 0 6654 6225 3 697 10603 103 17 8 chr13 14738517 14740772 -105543540 - L1VL4 LINE L1 -1091 2468 189 3 697 4991 34 2 0 chr13 14741102 14741690 -105542622 + L1Md_F3 LINE L1 5996 6584 0 3 697 1023 230 15 0 chr13 14742136 14742336 -105541976 - B3 SINE B2 -11 205 3 3 697 492 275 12 48 chr13 14742457 14742625 -105541687 - Lx8 LINE L1 -1058 6415 6254 3 697 21827 138 18 7 chr13 14742665 14745002 -105539310 - Lx2 LINE L1 -1 6996 4639 3 697 221 0 0 33 chr13 14745002 14745032 -105539280 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 697 21827 163 31 9 chr13 14745032 14748233 -105536079 - Lx2 LINE L1 -1248 4638 1361 3 697 246 62 0 0 chr13 14748457 14748489 -105535823 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 3 697 2652 126 12 23 chr13 14749210 14749745 -105534567 - L1VL4 LINE L1 -2550 1009 483 3 697 958 275 22 42 chr13 14749752 14750113 -105534199 - L1VL4 LINE L1 -5791 511 158 3 697 24 32 0 0 chr13 14750135 14750166 -105534146 + AT_rich Low_complexity Low_complexity 1 31 0 3 697 215 33 115 0 chr13 14750193 14750254 -105534058 + (TA)n Simple_repeat Simple_repeat 1 68 0 3 697 1517 195 122 32 chr13 14750409 14750812 -105533500 + RMER17B LTR ERVK 1 439 -519 3 697 1656 169 19 37 chr13 14750831 14751156 -105533156 + RMER13B LTR ERVK 272 590 -318 3 697 401 231 111 0 chr13 14751153 14751261 -105533051 - ORR1D1 LTR MaLR -250 124 5 3 697 984 99 0 0 chr13 14751346 14751488 -105532824 + (TTTC)n Simple_repeat Simple_repeat 2 143 0 3 697 1482 84 0 5 chr13 14751492 14751708 -105532604 - L1Md_F2 LINE L1 -20 6562 6348 3 697 1763 52 84 12 chr13 14751684 14751935 -105532377 + L1Md_F2 LINE L1 6076 6344 -238 3 697 1364 263 74 25 chr13 14751939 14752733 -105531579 - L1_Mur3 LINE L1 -516 5361 4513 3 697 2032 286 23 16 chr13 14752804 14753487 -105530825 - Lx9 LINE L1 -594 7050 6363 3 697 1333 234 152 35 chr13 14753559 14754224 -105530088 - Lx9 LINE L1 -1591 6053 5258 3 697 417 206 0 21 chr13 14754212 14754306 -105530006 - Lx7 LINE L1 -1315 6381 6290 3 697 792 183 62 21 chr13 14754309 14754392 -105529920 - RLTR20C LTR ERVK -7 571 481 3 697 423 56 0 0 chr13 14754392 14754446 -105529866 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 697 1163 208 65 60 chr13 14754446 14754812 -105529500 - RLTR20C LTR ERVK -98 480 1 3 697 559 192 0 0 chr13 14754812 14754911 -105529401 - Lx7 LINE L1 -983 6713 6615 3 697 925 225 49 18 chr13 14754909 14755135 -105529177 - Lx7 LINE L1 -1202 6494 6262 3 697 1604 200 42 3 chr13 14755172 14755503 -105528809 - Lx2 LINE L1 -2 6995 6652 3 697 274 192 164 0 chr13 14755504 14755577 -105528735 - Lx7 LINE L1 -1519 6177 6093 3 697 1487 254 101 72 chr13 14755594 14756620 -105527692 + L1_Mur3 LINE L1 2238 3293 -2587 3 697 353 180 198 10 chr13 14757825 14757926 -105526386 - MER20 DNA MER1_type -9 210 91 3 697 244 247 74 58 chr13 14758191 14758380 -105525932 + Lx7 LINE L1 7489 7680 -16 3 697 1833 234 62 108 chr13 14758479 14758896 -105525416 - RMER17B LTR ERVK -95 863 468 3 697 693 0 0 0 chr13 14758896 14758973 -105525339 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 3 697 1159 70 0 0 chr13 14758975 14759117 -105525195 - B1_Mus1 SINE Alu -6 142 1 3 697 1833 243 61 106 chr13 14759117 14759641 -105524671 - RMER17B LTR ERVK -389 517 1 3 697 180 152 0 0 chr13 14759669 14759702 -105524610 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 3 697 403 173 53 0 chr13 14759702 14759777 -105524535 - RSINE1 SINE B4 -12 153 75 3 697 290 265 33 26 chr13 14759791 14759942 -105524370 - L1_Mur3 LINE L1 -3650 2230 2079 3 697 546 251 42 75 chr13 14759973 14760331 -105523981 - L1_Mur3 LINE L1 -4313 1567 1222 3 697 243 257 103 26 chr13 14761230 14761361 -105522951 - Lx8 LINE L1 -2 7471 7329 3 697 651 88 0 0 chr13 14761361 14761452 -105522860 + (TCTA)n Simple_repeat Simple_repeat 3 93 0 3 697 243 257 103 26 chr13 14761452 14761476 -105522836 - Lx8 LINE L1 -145 7328 7304 3 697 834 239 35 0 chr13 14761505 14761702 -105522610 - Lx8 LINE L1 -345 7128 6925 3 697 341 296 0 0 chr13 14761734 14761815 -105522497 - ID2 SINE ID -1 82 2 3 697 26 50 0 0 chr13 14762104 14762144 -105522168 + AT_rich Low_complexity Low_complexity 1 40 0 3 697 21 36 0 0 chr13 14763732 14763760 -105520552 + AT_rich Low_complexity Low_complexity 1 28 0 3 697 628 343 50 31 chr13 14763836 14764095 -105520217 - B4A SINE B4 -27 265 2 3 697 313 336 67 27 chr13 14764211 14764361 -105519951 + MLT1I LTR MaLR 24 179 -232 3 697 701 214 67 20 chr13 14764792 14764963 -105519349 - B3 SINE B2 -3 190 1 3 697 3186 60 0 0 chr13 14765750 14766201 -105518111 + MusHAL1 LINE L1 73 523 -2189 3 697 1741 159 221 6 chr13 14766201 14766567 -105517745 + RLTR41 LTR ERV1 1 445 -1 3 697 594 311 62 64 chr13 14767877 14768796 -105515516 + RLTR6-int LTR ERV1 1593 2392 -5209 3 697 422 310 72 32 chr13 14768838 14769246 -105515066 + MuRRS4-int LTR ERV1 2929 3117 -1946 3 697 405 0 0 0 chr13 14769513 14769558 -105514754 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 697 321 26 0 0 chr13 14769558 14769595 -105514717 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 697 1555 264 45 12 chr13 14769650 14770159 -105514153 + MuRRS4-int LTR ERV1 3563 4020 -1043 3 697 421 339 11 26 chr13 14770958 14771222 -105513090 + RLTR6-int LTR ERV1 7447 7706 -72 3 697 1453 162 365 7 chr13 14771325 14771536 -105512776 + RLTR41 LTR ERV1 25 310 -136 3 697 198 0 0 0 chr13 14771536 14771558 -105512754 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 697 1453 160 57 11 chr13 14771558 14771684 -105512628 + RLTR41 LTR ERV1 311 443 -3 3 697 14613 164 20 10 chr13 14771685 14774627 -105509685 + L1_Mm LINE L1 1721 4692 -1191 3 697 2402 162 230 15 chr13 14775969 14776412 -105507900 - RMER6C LTR ERVK 0 690 126 3 697 357 24 0 0 chr13 14776412 14776454 -105507858 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 697 2402 162 230 15 chr13 14776454 14776554 -105507758 - RMER6C LTR ERVK -565 125 30 3 697 664 293 52 4 chr13 14776673 14776906 -105507406 - Lx8 LINE L1 -844 6629 6386 3 697 2526 269 99 38 chr13 14776908 14777236 -105507076 - L1_Mur3 LINE L1 -682 5198 4844 3 697 219 69 0 0 chr13 14777236 14777265 -105507047 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 3 697 2526 269 99 38 chr13 14777265 14777589 -105506723 - L1_Mur3 LINE L1 -1037 4843 4449 3 697 267 31 0 0 chr13 14777589 14777621 -105506691 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 697 2526 269 99 38 chr13 14777621 14778508 -105505804 - L1_Mur3 LINE L1 -1432 4448 3565 3 697 2193 166 68 8 chr13 14778514 14778909 -105505403 + MTC LTR MaLR 3 421 0 3 697 998 192 231 10 chr13 14779001 14779296 -105505016 - Lx5 LINE L1 0 7050 6691 3 697 6814 219 52 36 chr13 14779326 14781355 -105502957 - Lx6 LINE L1 0 7460 5397 3 697 1096 111 23 17 chr13 14781355 14781530 -105502782 - B2_Mm2 SINE B2 -19 176 1 3 697 6814 164 51 38 chr13 14781530 14782395 -105501917 - Lx6 LINE L1 -484 5396 4514 3 697 1202 112 15 10 chr13 14782395 14782594 -105501718 - L1Md_F2 LINE L1 0 6582 6383 3 697 6814 164 51 38 chr13 14782594 14782789 -105501523 - Lx6 LINE L1 -1367 4513 4323 3 697 37340 50 14 5 chr13 14782779 14789187 -105495125 - L1Md_T LINE L1 0 6582 152 3 697 1968 163 5 8 chr13 14789186 14789564 -105494748 - Lx6 LINE L1 -1542 4338 3962 3 697 8243 147 65 18 chr13 14789562 14790481 -105493831 - Lx6 LINE L1 -2839 3041 2066 3 697 240 35 0 0 chr13 14790481 14790510 -105493802 + (TGG)n Simple_repeat Simple_repeat 1 29 0 3 697 8243 169 51 19 chr13 14790510 14792475 -105491837 - Lx6 LINE L1 -3815 2065 52 3 697 311 248 11 55 chr13 14793113 14793258 -105491054 - L1M5 LINE L1 -645 5534 5395 3 697 2158 201 127 25 chr13 14793918 14794468 -105489844 + RMER1B Other Other 457 1062 -4 3 697 194 298 92 35 chr13 14794492 14794579 -105489733 - MER5A DNA MER1_type -91 98 7 3 697 1493 52 10 0 chr13 14794924 14795118 -105489194 - L1Md_F3 LINE L1 -2 6582 6387 3 697 2125 159 3 0 chr13 14795167 14795551 -105488761 - L1_Mur1 LINE L1 -5902 1080 696 3 697 8008 105 26 8 chr13 14795542 14797685 -105486627 + Lx3B LINE L1 4703 6890 -83 3 697 387 0 0 0 chr13 14797730 14797773 -105486539 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 697 713 259 60 20 chr13 14797847 14798048 -105486264 - B3 SINE B2 -6 210 2 3 697 986 244 14 0 chr13 14798888 14799097 -105485215 - B3 SINE B2 -3 213 2 3 697 394 212 38 0 chr13 14799138 14799218 -105485094 + ID4_ SINE ID 1 83 0 3 697 3283 18 39 0 chr13 14799692 14800073 -105484239 - MTA_Mm LTR MaLR 0 396 1 3 697 9175 31 3 2 chr13 14800075 14801170 -105483142 - MTA_Mm-int LTR MaLR -2 1096 1 3 697 3283 18 39 0 chr13 14801170 14801551 -105482761 - MTA_Mm LTR MaLR 0 396 1 3 697 1271 236 31 46 chr13 14801730 14802387 -105481925 + L1_Mur3 LINE L1 843 1498 -4382 3 697 1670 214 115 13 chr13 14802387 14802468 -105481844 + MTC LTR MaLR 1 82 -339 3 697 1040 100 0 0 chr13 14802468 14802608 -105481704 + B1_Mus1 SINE Alu 2 141 -7 3 697 1670 214 115 13 chr13 14802608 14802901 -105481411 + MTC LTR MaLR 83 413 -8 3 697 1468 221 27 5 chr13 14802905 14803314 -105480998 + L1_Mur3 LINE L1 1494 1911 -3969 3 697 1239 91 0 0 chr13 14803330 14803495 -105480817 + B2_Mm2 SINE B2 2 166 -29 3 697 5530 108 16 20 chr13 14803495 14803880 -105480432 + Lx3A LINE L1 6134 6525 -456 3 697 3988 135 35 86 chr13 14803880 14804731 -105479581 + RLTR13C2 LTR ERVK 1 808 0 3 697 5530 108 16 20 chr13 14804731 14805194 -105479118 + Lx3A LINE L1 6526 6979 -2 3 697 1063 145 32 11 chr13 14805194 14805216 -105479096 + B2_Mm1t SINE B2 173 193 0 3 697 3358 230 41 55 chr13 14805218 14806369 -105477943 + L1_Mur3 LINE L1 1914 3048 -2832 3 697 3455 196 74 12 chr13 14806364 14807257 -105477055 + L1_Mur3 LINE L1 3761 4708 -1172 3 697 24 67 0 0 chr13 14807270 14807315 -105476997 + AT_rich Low_complexity Low_complexity 1 45 0 3 697 4274 233 97 8 chr13 14807326 14808253 -105476059 + Lx9 LINE L1 6329 7310 -334 3 697 189 0 0 0 chr13 14808253 14808274 -105476038 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 697 4274 231 55 7 chr13 14808274 14808554 -105475758 + Lx9 LINE L1 7311 7632 -12 3 697 22 0 0 0 chr13 14808559 14808581 -105475731 + AT_rich Low_complexity Low_complexity 1 22 0 4 697 195 69 0 0 chr13 14808820 14808849 -105475463 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 697 2655 241 77 65 chr13 14808859 14809788 -105474524 + MTC-int LTR MaLR 382 1575 -5 4 697 1475 192 188 6 chr13 14809792 14810148 -105474164 + MTC LTR MaLR 1 421 0 4 697 1022 268 26 11 chr13 14810156 14810428 -105473884 - Charlie13a DNA Charlie -1159 355 80 4 697 295 211 111 14 chr13 14810810 14810882 -105473430 + MTD LTR MaLR 235 313 -106 4 87 372 317 9 9 chr13 14811123 14811228 -105473084 + PB1D10 SINE Alu 7 111 -6 4 698 578 276 107 20 chr13 14811641 14811965 -105472347 - L1_Mur3 LINE L1 -643 5657 5274 4 698 17250 188 79 129 chr13 14812016 14813440 -105470872 + L1Md_F2 LINE L1 507 2062 -3815 4 698 468 0 0 0 chr13 14813440 14813492 -105470820 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 698 23558 85 6 55 chr13 14813492 14817975 -105466337 + L1Md_F2 LINE L1 2063 5586 -297 4 698 8052 58 0 0 chr13 14817975 14818971 -105465341 + L1Md_F2 LINE L1 5587 6582 0 4 698 904 262 48 9 chr13 14819010 14819237 -105465075 - RLTR16 LTR ERVK -251 254 19 4 698 2982 136 0 25 chr13 14819265 14819793 -105464519 + L1_Mur2 LINE L1 3785 4299 -1578 4 698 534 128 0 0 chr13 14819789 14819875 -105464437 + L1_Mur2 LINE L1 5055 5140 -737 4 698 5626 169 35 45 chr13 14819875 14821048 -105463264 + Lx4B LINE L1 5893 7053 -5 4 698 322 226 21 21 chr13 14821092 14821187 -105463125 - L1_Rod LINE L1 -672 5175 5081 4 698 405 281 99 80 chr13 14821205 14821418 -105462894 + Lx8 LINE L1 6670 6886 -587 4 698 8155 23 1 0 chr13 14821418 14822817 -105461495 - L1Md_T LINE L1 0 6582 5183 4 698 983 292 123 29 chr13 14822812 14823365 -105460947 + Lx8 LINE L1 6869 7473 0 4 698 1062 198 82 42 chr13 14824156 14824462 -105459850 - RLTR33 LTR ERVK -85 593 191 4 698 842 243 35 5 chr13 14824462 14824665 -105459647 + Lx5 LINE L1 6842 7050 0 4 698 749 187 57 0 chr13 14825025 14825148 -105459164 + B1_Mur2 SINE Alu 10 139 -10 4 698 333 0 0 0 chr13 14825148 14825185 -105459127 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 698 357 43 0 0 chr13 14826459 14826506 -105457806 + (CATAG)n Simple_repeat Simple_repeat 3 49 0 4 698 1117 80 45 11 chr13 14826607 14826785 -105457527 - L1_Mus3 LINE L1 -1 6637 6454 4 698 402 21 0 0 chr13 14826842 14826889 -105457423 + (GAAAA)n Simple_repeat Simple_repeat 2 48 0 4 698 320 287 117 53 chr13 14827292 14827484 -105456828 - L1MA4 LINE L1 -1060 6413 6208 4 698 189 0 0 0 chr13 14827484 14827505 -105456807 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 4 698 320 287 117 53 chr13 14827505 14827518 -105456794 - L1MA4 LINE L1 -1266 6207 6195 4 698 248 278 0 0 chr13 14827524 14827578 -105456734 + polypyrimidine Low_complexity Low_complexity 5 58 0 4 698 1137 63 0 0 chr13 14827754 14827897 -105456415 + B1_Mm SINE Alu 2 144 -3 4 698 710 299 30 13 chr13 14827919 14828215 -105456097 - L1MA4 LINE L1 -336 5964 5602 4 698 305 330 9 9 chr13 14828322 14828429 -105455883 - Lx7 LINE L1 -133 7340 7234 4 698 942 130 0 0 chr13 14828470 14828624 -105455688 + (GGAA)n Simple_repeat Simple_repeat 2 155 0 4 698 342 291 9 79 chr13 14828637 14828847 -105455465 - Lx7 LINE L1 -237 7236 7039 4 698 3953 151 89 33 chr13 14828889 14829714 -105454598 - RMER13B LTR ERVK -34 874 1 4 698 807 312 24 12 chr13 14829724 14830061 -105454251 - Lx7 LINE L1 -453 7020 6680 4 698 1339 231 38 58 chr13 14830079 14830090 -105454222 + MT2B LTR ERVL 54 68 -533 4 698 243 161 105 18 chr13 14830090 14830147 -105454165 + MTE2b LTR MaLR 64 125 -254 4 698 1339 231 38 58 chr13 14830147 14830515 -105453797 + MT2B LTR ERVL 69 600 -1 4 698 588 332 28 28 chr13 14830520 14830771 -105453541 - Lx7 LINE L1 -844 6629 6379 4 698 1420 283 51 63 chr13 14830778 14831916 -105452396 - Lx7 LINE L1 -1450 6246 5149 4 698 1651 267 75 14 chr13 14832983 14834040 -105450272 + Lx6 LINE L1 900 2029 -3818 4 698 33785 42 0 3 chr13 14834037 14839289 -105445023 + L1Md_T LINE L1 255 5589 -297 4 698 8312 36 7 0 chr13 14839289 14840278 -105444034 + L1Md_T LINE L1 5590 6585 0 4 698 401 353 58 31 chr13 14840386 14840611 -105443701 - L1MD2 LINE L1 -330 6029 5799 4 698 311 295 188 8 chr13 14840759 14840817 -105443495 - L1MD2 LINE L1 -602 5757 5696 4 698 225 0 0 0 chr13 14840817 14840842 -105443470 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 698 311 295 188 8 chr13 14840842 14840916 -105443396 - L1MD2 LINE L1 -664 5695 5602 4 698 183 80 0 0 chr13 14840935 14840960 -105443352 + (A)n Simple_repeat Simple_repeat 1 25 0 4 698 2520 250 68 29 chr13 14841022 14842179 -105442133 + Lx6 LINE L1 2503 3760 -2120 4 698 4139 177 7 19 chr13 14842214 14843079 -105441233 + Lx6 LINE L1 4167 5021 -859 4 698 3569 219 57 17 chr13 14843072 14844116 -105440196 + Lx6 LINE L1 5543 6621 -839 4 698 1164 191 58 15 chr13 14844116 14844376 -105439936 - RMER16 LTR ERVK 0 533 263 4 698 2306 215 23 32 chr13 14844402 14844960 -105439352 + Lx6 LINE L1 6731 7283 -177 4 698 243 0 0 0 chr13 14844971 14844998 -105439314 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 4 698 256 289 41 0 chr13 14845055 14845152 -105439160 + Lx7 LINE L1 7206 7306 -390 4 698 180 0 0 0 chr13 14845197 14845217 -105439095 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4 698 30 27 0 0 chr13 14845335 14845372 -105438940 + AT_rich Low_complexity Low_complexity 1 37 0 4 698 1128 256 48 62 chr13 14845372 14846065 -105438247 + Lx9 LINE L1 5284 5970 -1674 4 698 333 0 0 0 chr13 14846353 14846390 -105437922 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 698 249 197 81 16 chr13 14846597 14846659 -105437653 + ORR1D2 LTR MaLR 268 333 -37 4 698 1580 243 16 3 chr13 14846659 14847026 -105437286 + ORR1D1 LTR MaLR 1 372 -2 4 698 764 211 65 18 chr13 14847029 14847198 -105437114 + ORR1D1-int LTR MaLR 6 182 -1188 4 698 434 33 17 0 chr13 14848521 14848581 -105435731 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 4 698 14610 123 12 3 chr13 14849411 14852664 -105431648 + L1_Mus4 LINE L1 3345 6628 -8 4 698 756 249 125 12 chr13 14853137 14853393 -105430919 + B4A SINE B4 4 288 -4 4 698 236 178 55 11 chr13 14854130 14854221 -105430091 + (TA)n Simple_repeat Simple_repeat 2 96 0 4 698 322 119 0 0 chr13 14854893 14854952 -105429360 - L1_Mur2 LINE L1 -2197 3680 3622 4 698 3672 184 18 0 chr13 14854952 14855627 -105428685 + Lx3C LINE L1 6279 6965 -11 4 698 33773 36 0 0 chr13 14855800 14861015 -105423297 + L1Md_T LINE L1 278 5589 -297 4 698 9023 4 0 1 chr13 14861015 14862012 -105422300 + L1Md_T LINE L1 5590 6585 0 4 698 289 184 35 60 chr13 14862014 14862130 -105422182 - Lx7 LINE L1 -7 7689 7577 4 698 1261 254 132 18 chr13 14862129 14862522 -105421790 + Lx6 LINE L1 7023 7460 0 4 698 508 193 30 106 chr13 14862514 14862751 -105421561 - Lx7 LINE L1 -124 7572 7354 4 698 2399 188 43 6 chr13 14862775 14863263 -105421049 + RLTR18B LTR ERVK 3 508 -4 4 698 212 79 0 50 chr13 14863265 14863305 -105421007 + (TAAAA)n Simple_repeat Simple_repeat 5 42 0 4 698 397 259 12 42 chr13 14863305 14863470 -105420842 - Lx7 LINE L1 -333 7363 7204 4 698 31733 74 1 15 chr13 14863706 14868861 -105415451 + L1Md_F2 LINE L1 511 5586 -297 4 698 7985 53 1 0 chr13 14868861 14869844 -105414468 + L1Md_F2 LINE L1 5587 6570 -12 4 698 22 0 0 0 chr13 14869873 14869895 -105414417 + AT_rich Low_complexity Low_complexity 1 22 0 4 698 21 0 0 0 chr13 14870262 14870283 -105414029 + AT_rich Low_complexity Low_complexity 1 21 0 4 698 3030 209 34 36 chr13 14870284 14870999 -105413313 - RMER1C Other Other -8 1334 622 4 698 316 272 0 0 chr13 14871360 14871441 -105412871 - RMER1B Other Other -374 692 612 4 698 275 254 30 0 chr13 14871523 14871590 -105412722 - MLT-int LTR MaLR -136 1599 1531 4 698 249 172 219 0 chr13 14871592 14871656 -105412656 + B3 SINE B2 79 156 -60 4 698 4309 41 2 2 chr13 14871663 14872181 -105412131 + L1Md_F2 LINE L1 6062 6579 -3 4 698 381 245 42 11 chr13 14872188 14872283 -105412029 - RLTR17 LTR ERVK -390 302 205 4 698 2280 226 32 7 chr13 14872290 14872846 -105411466 - Lx7 LINE L1 -483 7213 6644 4 698 3027 55 13 0 chr13 14872848 14873231 -105411081 - RLTR10 LTR ERVK -2 388 1 4 698 7838 41 10 2 chr13 14873250 14874236 -105410076 - RLTR10-int LTR ERVK -6 1981 988 4 698 321 175 0 0 chr13 14874219 14874276 -105410036 - RLTR10-int LTR ERVK -6039 503 447 4 698 496 308 25 25 chr13 14874293 14874657 -105409655 - IAP-d-int LTR ERVK -5481 1061 738 4 698 3689 56 30 1 chr13 14874714 14875567 -105408745 - RLTR10-int LTR ERVK -996 991 41 4 698 2884 54 52 0 chr13 14875579 14875948 -105408364 - RLTR10 LTR ERVK -2 388 1 4 698 2058 240 176 13 chr13 14875948 14876334 -105407978 - Lx6 LINE L1 -822 6638 6184 4 698 321 26 0 0 chr13 14876334 14876372 -105407940 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 698 2058 240 176 13 chr13 14876372 14876617 -105407695 - Lx6 LINE L1 -1277 6183 5904 4 698 11634 165 70 29 chr13 14876638 14879287 -105405025 - Lx6 LINE L1 -47 5833 3075 4 698 33 25 0 0 chr13 14880217 14880257 -105404055 + AT_rich Low_complexity Low_complexity 1 40 0 4 698 2887 250 45 26 chr13 14880355 14881246 -105403066 - Lx9 LINE L1 -212 7432 6525 4 698 1925 188 52 12 chr13 14882963 14883366 -105400946 + MTD LTR MaLR 1 419 0 4 698 21 0 0 0 chr13 14883546 14883567 -105400745 + AT_rich Low_complexity Low_complexity 1 21 0 4 698 297 0 0 0 chr13 14884095 14884128 -105400184 + (T)n Simple_repeat Simple_repeat 1 33 0 4 698 29783 88 10 18 chr13 14884187 14890338 -105393974 - L1Md_F2 LINE L1 -1 6581 480 4 698 314 125 18 0 chr13 14890338 14890394 -105393918 - L1VL1 LINE L1 -6348 74 18 4 698 441 66 0 0 chr13 14890582 14890643 -105393669 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 698 865 108 30 0 chr13 14891295 14891462 -105392850 + (TCTA)n Simple_repeat Simple_repeat 1 172 0 4 698 659 298 6 24 chr13 14891752 14891917 -105392395 - B4A SINE B4 -130 162 1 4 698 215 297 21 42 chr13 14892351 14892446 -105391866 - MIRc SINE MIR -131 137 45 4 698 251 162 39 29 chr13 14892453 14892555 -105391757 + (TA)n Simple_repeat Simple_repeat 1 103 0 4 698 198 136 0 0 chr13 14893502 14893546 -105390766 + (TCTCTG)n Simple_repeat Simple_repeat 4 47 0 4 698 222 37 0 0 chr13 14893551 14893578 -105390734 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 698 638 241 105 92 chr13 14894093 14894408 -105389904 - MER33 DNA MER1_type 0 324 6 4 698 2442 170 36 36 chr13 14894521 14895027 -105389285 - RMER1B Other Other -5 1061 556 4 698 39433 8 0 1 chr13 14895046 14902038 -105382274 - L1Md_A LINE L1 0 6582 1 4 698 2164 241 26 15 chr13 14902041 14903052 -105381260 - RMER1A Other Other -525 505 1 4 698 3476 51 2 0 chr13 14903091 14903540 -105380772 - L1Md_F2 LINE L1 -472 6110 5661 4 698 532 30 0 0 chr13 14903536 14903602 -105380710 + L1Md_F2 LINE L1 6163 6228 -354 4 698 737 118 0 0 chr13 14903602 14903721 -105380591 + L1Md_F2 LINE L1 6452 6570 -12 4 698 1746 326 77 28 chr13 14904042 14904159 -105380153 - Lx8 LINE L1 -129 7344 7230 4 698 1051 105 8 0 chr13 14904159 14904336 -105379976 + (GA)n Simple_repeat Simple_repeat 1 185 -66 4 698 1051 105 8 0 chr13 14904346 14904408 -105379904 + (GA)n Simple_repeat Simple_repeat 186 251 0 4 698 1746 326 77 28 chr13 14904408 14905293 -105379019 - Lx8 LINE L1 -247 7226 6281 4 698 262 172 78 0 chr13 14905305 14905369 -105378943 - L1M2 LINE L1 -3330 2813 2745 4 698 207 0 0 0 chr13 14905724 14905747 -105378565 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 698 5697 99 8 21 chr13 14906595 14908238 -105376074 - L1VL2 LINE L1 -1789 1826 212 4 698 618 305 100 50 chr13 14908218 14908313 -105375999 - Lx8 LINE L1 -1409 6287 6174 4 698 189 0 0 0 chr13 14908313 14908334 -105375978 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 698 2087 281 134 19 chr13 14908334 14909644 -105374668 - Lx8 LINE L1 -1523 6173 4716 4 698 207 0 0 0 chr13 14909964 14909987 -105374325 + (A)n Simple_repeat Simple_repeat 1 23 0 4 698 269 299 47 87 chr13 14910455 14910627 -105373685 + RMER15 LTR ERVL 396 560 -15 4 698 651 198 196 6 chr13 14911328 14911496 -105372816 - MTD LTR MaLR -14 405 206 4 698 754 217 43 0 chr13 14912229 14912367 -105371945 - B1_Mur4 SINE Alu -6 144 1 4 698 402 268 22 109 chr13 14912245 14912383 -105371929 - MT2B LTR ERVL -322 279 154 4 698 1398 272 102 53 chr13 14913731 14914516 -105369796 - Lx9 LINE L1 -1 7643 6821 5 698 387 287 155 43 chr13 14915176 14915305 -105369007 - L1M4 LINE L1 -1085 5061 4923 5 698 1911 103 31 25 chr13 14915305 14915625 -105368687 - RLTRETN_Mm LTR ERVK 0 322 1 5 698 387 287 155 43 chr13 14915625 14915772 -105368540 - L1M4 LINE L1 -1224 4922 4754 5 698 7820 45 6 1 chr13 14915792 14917148 -105367164 - L1Md_F3 LINE L1 0 6584 5223 5 698 5984 81 73 1 chr13 14917723 14918556 -105365756 - RLTR13B1 LTR ERVK 0 893 1 5 698 981 116 84 12 chr13 14919466 14919632 -105364680 - B2_Mm2 SINE B2 -6 189 12 5 698 234 0 0 0 chr13 14920080 14920106 -105364206 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 698 6248 188 47 53 chr13 14920692 14921749 -105362563 - Lx5 LINE L1 0 7050 5967 5 698 459 0 0 0 chr13 14921749 14921800 -105362512 + (TTA)n Simple_repeat Simple_repeat 1 51 0 5 698 20480 156 35 24 chr13 14921800 14923082 -105361230 - Lx5 LINE L1 -1084 5966 4659 5 698 188 0 74 0 chr13 14923082 14923109 -105361203 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 5 698 20480 154 35 22 chr13 14923109 14926009 -105358303 - Lx5 LINE L1 -1219 4658 1710 5 698 470 247 11 0 chr13 14926273 14926366 -105357946 + B1_Mur2 SINE Alu 1 94 -55 5 698 200 390 0 0 chr13 14926803 14926862 -105357450 - MIRc SINE MIR -167 101 43 5 698 704 262 44 0 chr13 14927559 14927742 -105356570 + MamRep1161 DNA TcMar 37 227 -730 5 698 352 327 101 27 chr13 14927801 14928029 -105356283 + MIR SINE MIR 3 250 -18 5 698 234 222 0 0 chr13 14928236 14928281 -105356031 - MTE2a LTR MaLR -329 50 6 5 698 698 34 11 0 chr13 14928302 14928391 -105355921 + (TAGA)n Simple_repeat Simple_repeat 3 92 0 5 698 2999 158 59 71 chr13 14928558 14929372 -105354940 + RLTR13D3 LTR ERVK 1 1114 0 5 698 234 191 0 0 chr13 14929607 14929654 -105354658 + (CAT)n Simple_repeat Simple_repeat 1 47 0 5 698 1024 289 54 18 chr13 14929766 14930323 -105353989 - L1MA6 LINE L1 -364 5936 5360 5 698 952 130 0 0 chr13 14931300 14931438 -105352874 - B1_Mus1 SINE Alu -9 139 2 5 698 618 185 0 48 chr13 14931465 14931590 -105352722 - PB1D9 SINE Alu -1 119 1 5 698 410 298 158 8 chr13 14932697 14932944 -105351368 - Lx8 LINE L1 -10 7463 7180 5 698 421 346 4 96 chr13 14932944 14933225 -105351087 + Lx8 LINE L1 6949 7203 -270 5 698 2585 93 0 2 chr13 14933217 14933699 -105350613 - Lx LINE L1 -720 5934 5456 5 698 5659 158 19 2 chr13 14933706 14934774 -105349538 + L1_Mm LINE L1 4410 5495 -388 5 698 198 0 0 0 chr13 14934813 14934835 -105349477 + (CATA)n Simple_repeat Simple_repeat 2 23 0 5 698 3898 137 104 106 chr13 14934837 14935389 -105348923 - RMER17A2 LTR ERVK -3 903 405 5 698 633 61 0 0 chr13 14935389 14935471 -105348841 + (GA)n Simple_repeat Simple_repeat 1 82 0 5 698 3898 137 104 106 chr13 14935471 14935818 -105348494 - RMER17A2 LTR ERVK -502 404 6 5 698 315 71 0 0 chr13 14935818 14935860 -105348452 + (CATA)n Simple_repeat Simple_repeat 1 42 0 5 698 3427 25 5 0 chr13 14936407 14936801 -105347511 - MTA_Mm LTR MaLR 0 396 1 5 698 201 39 0 0 chr13 14937089 14937115 -105347197 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 698 28770 81 4 86 chr13 14937865 14939714 -105344598 - L1Md_F2 LINE L1 -11 6574 4708 5 698 3244 84 12 55 chr13 14939714 14940219 -105344093 - RLTR1C LTR ERV1 -20 483 1 5 87 28770 81 4 86 chr13 14940219 14944056 -105340256 - L1Md_F2 LINE L1 -11 4707 830 5 699 1102 29 0 0 chr13 14944056 14944195 -105340117 - L1Md_T LINE L1 0 6582 6444 5 699 2181 93 135 11 chr13 14944195 14944542 -105339770 + RLTR10 LTR ERVK 1 390 0 5 699 5093 61 1 36 chr13 14944542 14945260 -105339052 + RLTR10-int LTR ERVK 302 994 -993 5 699 7843 287 43 40 chr13 14945314 14949915 -105334397 + RLTR10-int LTR ERVK 738 5074 -1468 5 699 491 0 17 0 chr13 14949915 14949974 -105334338 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 699 7843 21 26 11 chr13 14949974 14950593 -105333719 + RLTR10-int LTR ERVK 1347 1984 -3 5 699 2067 78 141 6 chr13 14950593 14950927 -105333385 + RLTR10 LTR ERVK 1 379 -11 5 699 10939 86 10 53 chr13 14950931 14953705 -105330607 - L1Md_A LINE L1 -3231 2652 35 5 699 919 196 178 4 chr13 14953731 14954007 -105330305 - Lx9 LINE L1 -10 7634 7311 5 699 732 276 18 53 chr13 14954625 14954851 -105329461 - RLTR18B LTR ERVK 0 512 295 5 699 728 266 87 81 chr13 14954870 14955168 -105329144 - RLTR18B LTR ERVK -285 331 32 5 699 464 192 13 0 chr13 14955689 14955767 -105328545 - RLTR18B LTR ERVK -433 79 1 5 699 424 261 473 0 chr13 14956406 14956554 -105327758 - URR1B DNA MER1_type -6 219 2 5 699 221 57 0 28 chr13 14956993 14957029 -105327283 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 699 477 0 0 0 chr13 14957862 14957915 -105326397 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 5 699 429 156 0 0 chr13 14958252 14958329 -105325983 + GA-rich Low_complexity Low_complexity 2 78 0 5 699 21 71 0 0 chr13 14958576 14958618 -105325694 + AT_rich Low_complexity Low_complexity 1 42 0 5 699 27 29 0 0 chr13 14958696 14958730 -105325582 + AT_rich Low_complexity Low_complexity 1 34 0 5 699 1129 112 65 0 chr13 14959163 14959333 -105324979 - B2_Mm2 SINE B2 -14 181 1 5 699 492 18 0 0 chr13 14959922 14959979 -105324333 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 699 507 319 76 56 chr13 14960010 14960312 -105324000 - MT2A LTR ERVL -141 392 85 5 699 3654 74 10 0 chr13 14960979 14961480 -105322832 - L1_Mus1 LINE L1 -122 6445 5940 5 699 1236 312 84 26 chr13 14962875 14964100 -105320212 - L1_Mur3 LINE L1 -570 5721 4403 5 699 21770 167 22 7 chr13 14964122 14968248 -105316064 - Lx2 LINE L1 0 6997 2800 5 699 288 0 0 0 chr13 14968248 14968280 -105316032 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 699 21770 175 26 18 chr13 14968280 14970464 -105313848 - Lx2 LINE L1 -3087 2799 512 5 699 1722 181 129 8 chr13 14970526 14970733 -105313579 + BGLII_A LTR ERVK 1 239 -206 5 699 459 0 0 0 chr13 14970733 14970784 -105313528 + (GGA)n Simple_repeat Simple_repeat 1 51 0 5 699 1722 181 129 8 chr13 14970784 14970971 -105313341 + BGLII_A LTR ERVK 240 443 -2 5 699 1085 29 15 0 chr13 14970985 14971121 -105313191 + (TTTC)n Simple_repeat Simple_repeat 4 141 0 5 699 33406 72 11 15 chr13 14973247 14979456 -105304856 - L1Md_F2 LINE L1 -17 6565 421 5 699 1045 259 34 41 chr13 14979459 14979753 -105304559 - ORR1D2-int LTR MaLR -1048 322 31 5 699 630 287 20 7 chr13 14979774 14979925 -105304387 - ORR1D2 LTR MaLR -217 153 1 5 699 1568 83 0 0 chr13 14981108 14981313 -105302999 - L1_Mus1 LINE L1 -3 6564 6360 5 699 713 96 32 0 chr13 14981717 14981842 -105302470 + (TA)n Simple_repeat Simple_repeat 2 130 0 5 699 25 0 0 0 chr13 14981844 14981869 -105302443 + AT_rich Low_complexity Low_complexity 1 25 0 5 699 271 320 17 17 chr13 14981876 14982054 -105302258 + (TA)n Simple_repeat Simple_repeat 1 178 0 5 699 759 254 163 8 chr13 14982859 14983117 -105301195 + RLTR16 LTR ERVK 1 298 -207 5 699 2069 232 72 14 chr13 14985791 14986290 -105298022 - RLTR20C LTR ERVK -6 528 1 5 699 1394 277 62 24 chr13 14988317 14988816 -105295496 + RMER5 LTR ERV1 1 518 -16 5 699 387 347 13 22 chr13 14989176 14989403 -105294909 - L1M5 LINE L1 -480 5699 5475 5 699 262 330 31 21 chr13 14989481 14989577 -105294735 - B1F SINE Alu -5 144 48 5 699 512 239 40 66 chr13 14989730 14989882 -105294430 - MLT1A0 LTR MaLR -214 151 4 5 699 938 150 6 6 chr13 14990178 14990346 -105293966 - Lx5 LINE L1 -1003 6047 5880 5 699 1700 224 122 2 chr13 14990341 14990775 -105293537 + Lx5 LINE L1 6548 7033 -17 5 699 21 36 0 0 chr13 14991330 14991358 -105292954 + AT_rich Low_complexity Low_complexity 1 28 0 5 699 7886 47 3 2 chr13 14991383 14992753 -105291559 - L1Md_F2 LINE L1 -2 6580 5210 5 699 2627 84 14 0 chr13 14992747 14993117 -105291195 + L1Md_F2 LINE L1 4869 5243 -640 5 699 195 42 0 0 chr13 14993132 14993156 -105291156 + (TA)n Simple_repeat Simple_repeat 1 24 0 5 699 489 93 0 0 chr13 14994745 14994820 -105289492 - B1_Mur4 SINE Alu 0 150 76 5 699 657 96 0 0 chr13 14994984 14995078 -105289234 + (CATA)n Simple_repeat Simple_repeat 3 96 0 5 699 2018 305 36 29 chr13 14995100 14995952 -105288360 - Lx9 LINE L1 -199 7445 6588 5 699 381 301 9 9 chr13 14995976 14996090 -105288222 - Lx8 LINE L1 -812 6661 6548 5 699 202 133 21 43 chr13 14996179 14996226 -105288086 + T-rich Low_complexity Low_complexity 4 49 0 5 699 1051 269 64 9 chr13 14996228 14996663 -105287649 - Lx2B LINE L1 -281 6719 6148 5 699 2024 210 26 47 chr13 14996744 14997234 -105287078 + Lx7 LINE L1 6587 7066 -630 5 699 551 191 0 64 chr13 14997237 14997377 -105286935 + Lx7 LINE L1 7559 7689 -7 5 699 1539 243 78 8 chr13 14997373 14997771 -105286541 - Lx6 LINE L1 0 7460 7035 5 699 2519 35 6 16 chr13 14997780 14998102 -105286210 - L1Md_F3 LINE L1 0 6584 6266 5 699 22 35 0 0 chr13 14998115 14998144 -105286168 + AT_rich Low_complexity Low_complexity 1 29 0 5 699 1330 291 104 56 chr13 14998144 14998908 -105285404 - L1_Mur3 LINE L1 -681 5199 4358 5 699 243 0 0 0 chr13 14998908 14998935 -105285377 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 699 1330 291 104 56 chr13 14998935 14999400 -105284912 - L1_Mur3 LINE L1 -1523 4357 3911 5 699 726 96 0 0 chr13 14999485 14999589 -105284723 + (TC)n Simple_repeat Simple_repeat 1 104 0 5 699 2801 9 0 0 chr13 14999662 15000000 -105284312 + L1_Mm LINE L1 5162 5499 -384 5 699 747 12 0 0 chr13 15000000 15000086 -105284226 + L1Md_A LINE L1 5500 5585 -298 1 699 8854 13 0 0 chr13 15000087 15001083 -105283229 + L1Md_A LINE L1 5587 6582 0 1 699 728 270 65 25 chr13 15001141 15001324 -105282988 - L1_Mur3 LINE L1 -2304 3576 3382 2 699 231 36 0 0 chr13 15001324 15001352 -105282960 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 699 728 270 65 25 chr13 15001352 15001616 -105282696 - L1_Mur3 LINE L1 -2499 3381 3112 2 699 2892 244 78 39 chr13 15001648 15002284 -105282028 - Lx6 LINE L1 -26 7434 6738 4 699 231 88 0 0 chr13 15002284 15002318 -105281994 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 5 699 2892 252 62 56 chr13 15002318 15002640 -105281672 - Lx6 LINE L1 -723 6737 6223 4 699 1859 174 16 58 chr13 15002640 15003042 -105281270 + RLTR11A2 LTR ERVK 1 344 -183 6 699 1004 102 88 28 chr13 15004407 15004589 -105279723 + RLTR11A2 LTR ERVK 335 527 0 6 699 5018 179 15 5 chr13 15004641 15005677 -105278635 - L1_Mur3 LINE L1 -799 5081 4035 7 699 287 245 25 19 chr13 15005753 15005874 -105278438 - L1_Mur3 LINE L1 -2806 3041 2899 2 699 1455 219 32 3 chr13 15005895 15006239 -105278073 - Lx5 LINE L1 -8 7042 6689 8 699 23 0 0 0 chr13 15006326 15006349 -105277963 + AT_rich Low_complexity Low_complexity 1 23 0 9 699 692 268 9 161 chr13 15006349 15006567 -105277745 - B3A SINE B2 -10 185 1 1 699 1140 75 0 0 chr13 15006594 15006741 -105277571 + B1_Mus1 SINE Alu 2 148 0 1 699 861 174 0 0 chr13 15007038 15007199 -105277113 + CT-rich Low_complexity Low_complexity 2 162 0 1 699 244 94 0 0 chr13 15007199 15007231 -105277081 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 1 699 24 85 0 0 chr13 15007699 15007758 -105276554 + AT_rich Low_complexity Low_complexity 1 59 0 1 699 297 0 0 0 chr13 15009140 15009173 -105275139 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 699 2307 209 9 34 chr13 15009572 15010128 -105274184 + L1VL4 LINE L1 227 768 -5534 1 699 29724 90 16 4 chr13 15010129 15015407 -105268905 + L1Md_F2 LINE L1 273 5585 -298 1 699 7237 80 14 2 chr13 15015408 15016373 -105267939 + L1Md_F2 LINE L1 5587 6563 -19 1 699 21876 168 26 18 chr13 15016397 15018761 -105265551 + Lx LINE L1 1108 3478 -2405 1 699 210 71 0 0 chr13 15018761 15018789 -105265523 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1 699 21876 156 31 14 chr13 15018789 15021893 -105262419 + Lx LINE L1 3479 6653 -1 1 699 192 77 0 0 chr13 15022085 15022111 -105262201 + (A)n Simple_repeat Simple_repeat 1 26 0 2 699 279 262 12 0 chr13 15024285 15024365 -105259947 - L1MB3 LINE L1 -25 6158 6078 2 699 326 346 10 0 chr13 15024999 15025100 -105259212 - HAL1 LINE L1 -781 1726 1625 2 699 325 223 56 111 chr13 15025117 15025243 -105259069 - L1MB7 LINE L1 -17 6167 6049 2 699 472 404 42 34 chr13 15025516 15025780 -105258532 + MLT1E1 LTR MaLR 389 654 0 2 699 817 222 165 37 chr13 15026428 15026671 -105257641 + MTB_Mm LTR MaLR 134 407 0 2 699 998 248 136 33 chr13 15026828 15027158 -105257154 - ORR1D2 LTR MaLR -2 368 5 2 699 315 0 0 0 chr13 15027287 15027322 -105256990 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 699 1572 238 28 45 chr13 15027348 15027394 -105256918 - MTD LTR MaLR 0 419 378 2 699 3080 14 0 6 chr13 15027394 15027742 -105256570 + ORR1A0 LTR MaLR 1 346 0 2 699 1572 238 28 45 chr13 15027742 15028121 -105256191 - MTD LTR MaLR -42 377 1 2 699 2999 280 92 49 chr13 15028121 15028959 -105255353 - MTD-int LTR MaLR 0 1258 407 2 699 3208 72 51 7 chr13 15028959 15029407 -105254905 - L1Md_F2 LINE L1 0 6582 6115 3 699 2999 281 91 49 chr13 15029407 15029779 -105254533 - MTD-int LTR MaLR -852 406 3 2 699 771 231 24 0 chr13 15029786 15029955 -105254357 + MERVL_2A-int LTR ERVL 4855 5027 -734 3 699 204 97 0 0 chr13 15030033 15030064 -105254248 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 699 504 117 0 0 chr13 15030073 15030150 -105254162 + (TA)n Simple_repeat Simple_repeat 2 78 0 3 699 5307 135 25 1 chr13 15030150 15031032 -105253280 + Lx LINE L1 5637 6539 -115 3 699 588 53 0 0 chr13 15031151 15031227 -105253085 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 3 699 810 294 79 18 chr13 15031457 15031914 -105252398 - L1_Mur3 LINE L1 -167 5713 5229 3 699 2649 300 71 35 chr13 15031983 15033175 -105251137 - Lx9 LINE L1 -26 7618 6375 3 699 445 228 185 67 chr13 15033175 15033504 -105250808 - RLTR9A LTR ERVK 0 368 1 3 699 2649 300 71 35 chr13 15033504 15033577 -105250735 - Lx9 LINE L1 -1270 6374 6308 3 699 1335 195 17 3 chr13 15033646 15033945 -105250367 - L1_Rod LINE L1 -4181 1666 1364 3 699 460 304 109 28 chr13 15033992 15034313 -105249999 - L1M5 LINE L1 -2727 3419 3073 4 699 248 221 56 28 chr13 15034402 15034509 -105249803 - Lx9 LINE L1 -53 7591 7482 4 699 417 123 0 0 chr13 15034514 15034579 -105249733 + (TA)n Simple_repeat Simple_repeat 1 65 0 4 699 228 305 91 10 chr13 15034600 15034637 -105249675 - L1MD LINE L1 -3082 3064 3027 4 699 333 68 0 0 chr13 15034637 15034681 -105249631 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 699 228 305 91 10 chr13 15034681 15034842 -105249470 - L1MD LINE L1 -3120 3026 2850 4 699 1040 231 54 38 chr13 15034875 15035190 -105249122 - Lx9 LINE L1 -226 7418 7099 4 699 443 214 13 19 chr13 15035206 15035363 -105248949 + Lx9 LINE L1 7401 7556 -88 4 699 1556 174 227 0 chr13 15036213 15036534 -105247778 + ORR1B1 LTR MaLR 1 394 0 4 699 2198 194 51 53 chr13 15037082 15037594 -105246718 - RMER5 LTR ERV1 0 534 24 4 699 244 206 175 10 chr13 15037595 15037698 -105246614 - L1MEc LINE L1 -3378 2941 2822 4 699 5066 35 0 2 chr13 15038370 15038973 -105245339 + L1Md_F2 LINE L1 5981 6582 0 4 699 389 269 51 76 chr13 15038990 15039227 -105245085 - L1MEc LINE L1 -4882 1518 1288 4 699 4534 93 29 11 chr13 15039432 15040181 -105244131 + MusHAL1 LINE L1 1447 2209 -503 4 699 1697 169 8 30 chr13 15040175 15040548 -105243764 + L1_Mur1 LINE L1 5236 5600 -286 5 699 1631 116 33 63 chr13 15040571 15040903 -105243409 + RLTRETN_Mm LTR ERVK 1 322 0 5 699 3326 59 0 7 chr13 15040903 15041350 -105242962 + ETnERV-int LTR ERVK 1 444 -2870 5 699 10965 98 9 25 chr13 15041334 15043194 -105241118 + MMETn-int LTR ERVK 3219 4844 0 5 699 1720 109 30 63 chr13 15043194 15043527 -105240785 + RLTRETN_Mm LTR ERVK 1 322 0 5 699 378 155 0 14 chr13 15043625 15043697 -105240615 - RLTR14-int LTR ERV1 -4140 1177 1107 5 699 250 212 128 12 chr13 15044229 15044315 -105239997 + Lx4A LINE L1 6961 7056 -2 5 699 233 206 14 0 chr13 15045068 15045112 -105239200 - B1F1 SINE Alu -102 47 1 5 699 1050 267 27 15 chr13 15045574 15045912 -105238400 + RLTR14-int LTR ERV1 3814 4155 -1162 5 699 3157 93 2 22 chr13 15045930 15046382 -105237930 + RLTR13B4 LTR ERVK 260 702 -101 5 699 1497 269 27 52 chr13 15046435 15047070 -105237242 + L1_Rod LINE L1 3819 4437 -1410 5 699 1322 269 51 58 chr13 15047135 15047655 -105236657 + L1_Rod LINE L1 4709 5236 -611 5 699 776 211 167 0 chr13 15047655 15047835 -105236477 + B3 SINE B2 3 212 -4 5 699 1322 269 51 58 chr13 15047835 15048029 -105236283 + L1_Rod LINE L1 5237 5418 -429 5 699 279 0 0 0 chr13 15048029 15048060 -105236252 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 699 1322 269 51 58 chr13 15048060 15048124 -105236188 + L1_Rod LINE L1 5419 5481 -366 5 699 1603 224 109 2 chr13 15048118 15048530 -105235782 - Lx9 LINE L1 -866 6778 6323 6 699 1981 230 36 39 chr13 15048620 15048822 -105235490 - Lx9 LINE L1 -1638 6006 5768 6 699 1270 229 84 41 chr13 15048822 15049190 -105235122 + ORR1C2 LTR MaLR 1 384 0 6 699 1981 184 26 44 chr13 15049190 15049563 -105234749 - Lx9 LINE L1 -80 5767 5397 6 699 3137 221 53 1 chr13 15049575 15050378 -105233934 + Lx9 LINE L1 6782 7626 -18 6 699 397 330 6 11 chr13 15050485 15050666 -105233646 + L1VL4 LINE L1 193 372 -5930 6 699 876 59 17 0 chr13 15050749 15050867 -105233445 + B1_Mm SINE Alu 28 147 0 6 699 6237 158 29 12 chr13 15050916 15052065 -105232247 + Lx2B LINE L1 5827 6994 -6 6 699 966 279 51 1 chr13 15052121 15052434 -105231878 - MTD LTR MaLR -21 400 33 6 699 18250 173 25 9 chr13 15052478 15056921 -105227391 - L1VL4 LINE L1 -876 5007 493 6 699 293 312 75 94 chr13 15056951 15057110 -105227202 + B3 SINE B2 50 205 -11 6 699 224 206 65 0 chr13 15057569 15057661 -105226651 + (TA)n Simple_repeat Simple_repeat 2 99 0 7 699 595 36 12 12 chr13 15059424 15059507 -105224805 + (TC)n Simple_repeat Simple_repeat 2 84 0 7 699 768 121 39 5 chr13 15059504 15059713 -105224599 + CT-rich Low_complexity Low_complexity 1 216 0 7 699 314 351 71 19 chr13 15060689 15060843 -105223469 + RSINE1 SINE B4 2 163 -2 7 699 1587 206 131 7 chr13 15060857 15061215 -105223097 - MTC LTR MaLR -25 396 2 7 699 4040 121 13 0 chr13 15061455 15062068 -105222244 - Lx3_Mus LINE L1 -474 6535 5915 7 699 512 116 0 11 chr13 15062069 15062156 -105222156 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 7 699 358 115 25 13 chr13 15062156 15062235 -105222077 - Lx3_Mus LINE L1 -1080 5929 5850 7 699 633 76 0 0 chr13 15062440 15062532 -105221780 + L1_Mus2 LINE L1 6473 6564 -2 7 699 5718 151 24 9 chr13 15063698 15064289 -105220023 + Lx LINE L1 363 973 -5661 7 699 3323 33 10 0 chr13 15064289 15064681 -105219631 - MTA_Mm LTR MaLR 0 396 1 7 699 23116 169 29 12 chr13 15064681 15067173 -105217139 + Lx LINE L1 974 3476 -2407 7 699 189 0 0 0 chr13 15067173 15067194 -105217118 + (CAA)n Simple_repeat Simple_repeat 1 21 0 8 699 23116 172 30 13 chr13 15067194 15067400 -105216912 + Lx LINE L1 3477 3722 -2161 7 699 3322 8 0 0 chr13 15067400 15067775 -105216537 + L1Md_A LINE L1 6208 6582 0 8 699 23116 160 21 9 chr13 15067775 15070673 -105213639 + Lx LINE L1 3723 6648 -6 7 699 190 294 41 52 chr13 15071338 15071435 -105212877 - L3 LINE CR1 -266 4223 4128 8 700 768 68 0 0 chr13 15074088 15074191 -105210121 + (TTCC)n Simple_repeat Simple_repeat 3 105 0 8 700 838 52 8 8 chr13 15074395 15074512 -105209800 + (GA)n Simple_repeat Simple_repeat 2 118 0 8 700 406 273 98 0 chr13 15074919 15075051 -105209261 + ERVL-int LTR ERVL 5610 5754 -3 8 700 776 305 90 44 chr13 15075053 15075440 -105208872 + MLT2D LTR ERVL 1 405 -9 8 700 244 377 53 12 chr13 15075712 15075881 -105208431 + L1MEf LINE L1 796 971 -5576 8 700 657 329 135 29 chr13 15076009 15076625 -105207687 + L1MEf LINE L1 1140 1820 -4820 8 700 352 372 36 33 chr13 15076723 15077029 -105207283 + L1MEf LINE L1 3842 4148 -2396 8 700 4604 207 113 11 chr13 15077029 15077060 -105207252 - L1_Mur3 LINE L1 -2927 2953 2923 8 700 210 37 0 0 chr13 15077060 15077087 -105207225 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 8 700 4604 207 113 11 chr13 15077087 15078428 -105205884 - L1_Mur3 LINE L1 -2958 2922 1443 8 700 1059 317 110 24 chr13 15078439 15079151 -105205161 - L1_Mur3 LINE L1 -6387 1341 569 8 700 3601 192 4 50 chr13 15079301 15080094 -105204218 + Lx2B LINE L1 6238 6993 -7 8 700 1449 237 125 36 chr13 15080155 15080791 -105203521 - Lx9 LINE L1 -1592 6052 5320 9 700 1312 283 157 26 chr13 15080790 15081414 -105202898 + Lx9 LINE L1 6765 7470 -174 9 700 203 32 65 0 chr13 15081415 15081446 -105202866 + (CATA)n Simple_repeat Simple_repeat 3 35 0 9 700 207 100 0 0 chr13 15081523 15081553 -105202759 + (GGAAA)n Simple_repeat Simple_repeat 1 30 0 9 700 21 0 0 0 chr13 15081573 15081594 -105202718 + AT_rich Low_complexity Low_complexity 1 21 0 9 700 8005 133 16 9 chr13 15081637 15083779 -105200533 - Lx LINE L1 -4 6650 4492 9 700 4223 88 7 0 chr13 15083772 15084375 -105199937 - MusHAL1 LINE L1 -1240 1472 866 9 700 719 224 56 26 chr13 15084392 15084626 -105199686 - L1MC LINE L1 -2386 3760 3520 9 700 4085 73 15 0 chr13 15084630 15085165 -105199147 - L1_Mus1 LINE L1 0 6567 6025 9 700 1292 56 0 0 chr13 15085165 15085327 -105198985 + L1_Mus1 LINE L1 5862 6023 -544 9 700 448 275 50 34 chr13 15085512 15085831 -105198481 - L1_Mur3 LINE L1 -2780 3363 3045 9 700 2734 223 36 0 chr13 15085853 15086409 -105197903 - Lx6 LINE L1 -457 7003 6428 1 700 1201 314 47 31 chr13 15086412 15086872 -105197440 - L1_Rod LINE L1 -3830 2017 1554 1 700 210 37 0 0 chr13 15086872 15086899 -105197413 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 700 974 123 0 0 chr13 15086899 15087037 -105197275 - B1_Mus1 SINE Alu -9 139 2 1 700 1201 317 45 34 chr13 15087037 15087597 -105196715 - L1_Rod LINE L1 -4294 1553 982 1 700 2640 214 57 61 chr13 15087942 15088665 -105195647 - RMER6D LTR ERVK 0 720 1 1 700 953 288 85 17 chr13 15088696 15088989 -105195323 - MTE2b LTR MaLR -64 315 3 1 700 25 0 0 0 chr13 15089156 15089181 -105195131 + AT_rich Low_complexity Low_complexity 1 25 0 1 700 675 312 82 60 chr13 15089399 15089572 -105194740 + L1M3 LINE L1 3314 3497 -2643 1 700 229 26 26 26 chr13 15089572 15089611 -105194701 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 700 675 312 82 60 chr13 15089611 15089972 -105194340 + L1M3 LINE L1 3498 3860 -2280 1 700 27 0 0 0 chr13 15090026 15090053 -105194259 + AT_rich Low_complexity Low_complexity 1 27 0 1 700 405 0 0 0 chr13 15090156 15090201 -105194111 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 1 700 2462 168 33 9 chr13 15090207 15090627 -105193685 - Lx2B LINE L1 -61 6939 6510 1 700 4368 153 84 21 chr13 15090629 15091435 -105192877 - RMER19B LTR ERVK -45 857 1 1 700 180 97 0 0 chr13 15091499 15091530 -105192782 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 700 419 311 29 0 chr13 15091540 15091643 -105192669 + PB1D9 SINE Alu 2 107 -13 1 700 275 366 73 0 chr13 15091541 15091643 -105192669 + ID_B1 SINE B4 84 194 -30 1 700 249 362 0 0 chr13 15091643 15091712 -105192600 + B3A SINE B2 2 70 -128 1 700 762 43 0 0 chr13 15091791 15091885 -105192427 + (GA)n Simple_repeat Simple_repeat 1 94 0 1 700 450 0 0 0 chr13 15091906 15091956 -105192356 + (TTAGGG)n Simple_repeat Simple_repeat 6 55 0 1 700 970 252 82 48 chr13 15091975 15092657 -105191655 + L1M3 LINE L1 4984 5691 -621 1 700 249 242 0 16 chr13 15092640 15092703 -105191609 + L1M3 LINE L1 5821 5882 -409 1 700 716 283 21 5 chr13 15092781 15092973 -105191339 + Lx6 LINE L1 7126 7320 -140 1 700 359 274 78 28 chr13 15092957 15093137 -105191175 + Lx6 LINE L1 7246 7434 -26 1 700 329 315 120 16 chr13 15093386 15093644 -105190668 + L1MB3 LINE L1 5895 6179 -4 1 700 196 354 50 12 chr13 15093781 15093861 -105190451 + MIRm SINE MIR 153 235 -41 1 700 348 283 35 26 chr13 15095993 15096109 -105188203 - Tigger5 DNA MER2_type -26 2380 2264 1 700 7032 39 20 1 chr13 15096474 15097339 -105186973 - L1Md_T LINE L1 -3 6579 5695 1 700 365 271 16 0 chr13 15097779 15097901 -105186411 + (TA)n Simple_repeat Simple_repeat 1 124 0 1 700 412 242 44 0 chr13 15098011 15098102 -105186210 + PB1D10 SINE Alu 18 112 -5 1 700 21 0 0 0 chr13 15098158 15098179 -105186133 + AT_rich Low_complexity Low_complexity 1 21 0 1 700 504 48 0 0 chr13 15098647 15098710 -105185602 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 700 22 35 0 0 chr13 15098835 15098864 -105185448 + AT_rich Low_complexity Low_complexity 1 29 0 1 700 2334 179 42 11 chr13 15099246 15099719 -105184593 - Lx9 LINE L1 -72 7572 7085 1 700 350 149 14 0 chr13 15099724 15099798 -105184514 + Lx9 LINE L1 7570 7644 0 1 700 544 385 17 37 chr13 15101629 15101928 -105182384 + Tigger7 DNA MER2_type 13 305 -2186 1 700 619 304 132 10 chr13 15101944 15102233 -105182079 + Tigger7 DNA MER2_type 2160 2483 -8 1 700 22 0 0 0 chr13 15102397 15102419 -105181893 + AT_rich Low_complexity Low_complexity 1 22 0 1 700 245 232 67 79 chr13 15104694 15104783 -105179529 + MT2B LTR ERVL 157 244 -357 1 700 469 252 28 0 chr13 15104704 15104811 -105179501 + PB1D10 SINE Alu 8 117 0 1 700 676 230 20 15 chr13 15106195 15106394 -105177918 + L1_Rod LINE L1 4236 4435 -1412 1 700 730 234 40 90 chr13 15106428 15106728 -105177584 + L1_Rod LINE L1 5039 5323 -524 1 700 369 96 120 27 chr13 15106734 15106809 -105177503 - L1_Mur1 LINE L1 -3704 2182 2101 1 700 14589 100 17 14 chr13 15106777 15107092 -105177220 + L1_Mur1 LINE L1 3176 3486 -2400 1 700 303 28 0 0 chr13 15107092 15107128 -105177184 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1 700 14589 100 17 14 chr13 15107128 15109082 -105175230 + L1_Mur1 LINE L1 3487 5452 -434 1 700 1171 228 11 39 chr13 15109083 15109366 -105174946 + ORR1D1 LTR MaLR 95 369 -5 1 700 3020 254 59 65 chr13 15109366 15110373 -105173939 + Lx9 LINE L1 6536 7512 -132 1 700 246 81 0 0 chr13 15110373 15110410 -105173902 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 700 3020 254 59 65 chr13 15110410 15110516 -105173796 + Lx9 LINE L1 7513 7643 -1 1 700 390 295 21 0 chr13 15110914 15111009 -105173303 + RSINE1 SINE B4 11 107 -58 1 700 342 0 0 0 chr13 15111024 15111062 -105173250 + (CATA)n Simple_repeat Simple_repeat 1 38 0 1 700 26 64 0 0 chr13 15111071 15111118 -105173194 + AT_rich Low_complexity Low_complexity 1 47 0 1 700 519 17 0 0 chr13 15112681 15112741 -105171571 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 700 209 262 45 15 chr13 15112780 15112846 -105171466 + L2 LINE L2 2873 2940 -479 1 700 424 282 145 84 chr13 15113127 15113472 -105170840 - MTEa LTR MaLR -7 372 7 1 700 859 89 0 0 chr13 15115305 15115428 -105168884 - Lx LINE L1 -748 5906 5784 1 700 644 189 50 6 chr13 15115447 15115607 -105168705 - Lx LINE L1 -12 6642 6476 1 700 3122 99 9 5 chr13 15115610 15116055 -105168257 + Lx LINE L1 6206 6652 -2 1 700 2816 289 48 51 chr13 15116728 15117914 -105166398 + Lx8 LINE L1 6262 7443 -30 1 700 25 0 0 0 chr13 15117923 15117948 -105166364 + AT_rich Low_complexity Low_complexity 1 25 0 1 700 227 326 20 98 chr13 15118642 15118744 -105165568 + MIRb SINE MIR 11 104 -164 1 700 33849 48 0 3 chr13 15119476 15124909 -105159403 + L1Md_T LINE L1 78 5589 -297 1 700 8539 30 0 0 chr13 15124909 15125905 -105158407 + L1Md_T LINE L1 5590 6585 0 1 700 2045 143 25 35 chr13 15126159 15126557 -105157755 - Lx4B LINE L1 -434 6624 6231 1 700 458 274 89 55 chr13 15126565 15126896 -105157416 - L1M2 LINE L1 -819 5327 4982 1 700 345 47 0 0 chr13 15126898 15126941 -105157371 + (TA)n Simple_repeat Simple_repeat 2 44 0 1 700 1699 290 86 19 chr13 15127032 15128034 -105156278 - L1M2 LINE L1 -1747 4396 3331 1 700 1821 81 38 11 chr13 15128034 15128296 -105156016 - L1Md_F2 LINE L1 -4 6578 6310 1 700 1699 290 86 19 chr13 15128296 15128416 -105155896 - L1M2 LINE L1 -2813 3330 3200 1 700 1579 138 49 116 chr13 15128417 15128762 -105155550 - ORR1A4 LTR MaLR -7 322 1 1 700 1015 256 128 55 chr13 15128766 15129464 -105154848 - L1_Mur3 LINE L1 -2680 3167 2426 1 700 180 0 0 0 chr13 15129516 15129536 -105154776 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 700 19547 164 71 18 chr13 15129571 15134644 -105149668 - Lx LINE L1 -1 6653 1297 1 700 1534 62 24 0 chr13 15134635 15134845 -105149467 - L1_Mus2 LINE L1 -289 6277 6063 1 700 452 147 60 0 chr13 15135229 15135337 -105148975 + RMER3D-int LTR ERVK 494 583 -2259 1 700 214 146 49 0 chr13 15135338 15135379 -105148933 + GA-rich Low_complexity Low_complexity 3 45 0 1 700 469 126 0 75 chr13 15135424 15135437 -105148875 + RMER3D-int LTR ERVK 1014 1026 -1816 1 700 3478 23 2 0 chr13 15135437 15135832 -105148480 - MTA_Mm LTR MaLR 0 396 1 1 700 1727 180 116 28 chr13 15135832 15136298 -105148014 + RMER3D-int LTR ERVK 1027 1533 -1309 1 700 657 142 48 61 chr13 15136330 15136495 -105147817 + RMER3D-int LTR ERVK 1532 1694 -1148 1 700 3111 198 43 47 chr13 15136496 15136884 -105147428 + RMER3D-int LTR ERVK 1925 2305 -537 1 700 2394 94 11 19 chr13 15136884 15137243 -105147069 + L1Md_F2 LINE L1 6215 6570 -12 1 700 486 49 0 0 chr13 15137243 15137304 -105147008 + (GGAA)n Simple_repeat Simple_repeat 3 63 0 1 700 3111 198 43 47 chr13 15137304 15137834 -105146478 + RMER3D-int LTR ERVK 2306 2840 -2 1 700 2933 72 17 10 chr13 15137835 15138253 -105146059 + BGLII LTR ERVK 1 421 0 1 700 2557 168 11 29 chr13 15138258 15138785 -105145527 + L1_Mur1 LINE L1 4655 5172 -714 1 700 704 53 0 0 chr13 15138800 15138894 -105145418 + L1_Mm LINE L1 5363 5456 -427 1 700 254 267 48 0 chr13 15138895 15139000 -105145312 - L1_Mur3 LINE L1 -3691 2189 2080 1 700 226 348 49 0 chr13 15139596 15139760 -105144552 - L1_Rod LINE L1 -6505 667 496 1 700 201 278 0 0 chr13 15139781 15139835 -105144477 + T-rich Low_complexity Low_complexity 1 54 0 1 700 2195 199 126 20 chr13 15140193 15140544 -105143768 + Lx9 LINE L1 6922 7321 -323 1 700 450 0 0 0 chr13 15140544 15140594 -105143718 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 1 700 2195 199 126 20 chr13 15140594 15140893 -105143419 + Lx9 LINE L1 7322 7641 -3 1 700 920 291 49 23 chr13 15141295 15141603 -105142709 + MTD LTR MaLR 52 419 0 1 700 31 26 0 0 chr13 15141947 15141985 -105142327 + AT_rich Low_complexity Low_complexity 1 38 0 1 700 721 176 50 0 chr13 15141999 15142118 -105142194 - B3 SINE B2 -86 130 6 1 700 459 130 30 0 chr13 15142657 15142757 -105141555 + (TCTA)n Simple_repeat Simple_repeat 1 103 0 1 700 375 237 270 29 chr13 15142757 15142931 -105141381 - B3 SINE B2 0 216 1 1 700 1397 84 0 0 chr13 15143734 15143924 -105140388 - L1_Mus4 LINE L1 -266 6370 6181 1 700 1397 93 189 8 chr13 15143921 15144180 -105140132 + L1_Mus4 LINE L1 6331 6636 0 1 700 489 253 101 66 chr13 15144433 15144721 -105139591 + Lx8 LINE L1 7169 7466 -7 1 700 208 327 0 18 chr13 15145533 15145589 -105138723 + MIRb SINE MIR 13 67 -201 1 700 209 128 26 0 chr13 15146581 15146620 -105137692 + T-rich Low_complexity Low_complexity 2 41 0 1 700 227 146 24 0 chr13 15146858 15146899 -105137413 - L1MEc LINE L1 -4763 1653 1612 1 700 508 276 41 65 chr13 15147165 15147456 -105136856 - L1ME1 LINE L1 -206 5973 5690 1 700 241 289 79 16 chr13 15147462 15147652 -105136660 + L1MD LINE L1 5130 5331 -815 1 700 399 359 103 5 chr13 15147754 15148124 -105136188 - L1MEc LINE L1 -5773 627 222 1 700 7135 126 37 6 chr13 15148553 15150551 -105133761 + Lx3B LINE L1 4921 7009 0 1 700 559 286 72 35 chr13 15150567 15150857 -105133455 + Kanga1 DNA Tc2 1426 1726 -19 1 700 1712 122 15 15 chr13 15151498 15151764 -105132548 + MT2C_Mm LTR ERVL 210 475 0 1 700 8852 97 21 0 chr13 15151766 15153033 -105131279 + MERVL-int LTR ERVL 2592 3885 -1600 1 700 8050 127 40 4 chr13 15153033 15154689 -105129623 + Lx3C LINE L1 5255 6974 -2 1 700 552 269 5 5 chr13 15155241 15155428 -105128884 + L1_Mur3 LINE L1 2877 3063 -2817 1 700 1076 285 43 60 chr13 15155447 15155509 -105128803 + L1_Mur3 LINE L1 3223 3282 -2598 1 700 556 217 112 41 chr13 15155509 15155706 -105128606 + B3 SINE B2 5 215 -1 1 700 1076 285 43 60 chr13 15155706 15156342 -105127970 + L1_Mur3 LINE L1 3283 3909 -1971 1 700 3272 147 23 12 chr13 15156356 15156919 -105127393 - Lx2 LINE L1 0 6997 6429 1 700 5527 126 17 39 chr13 15156952 15158538 -105125774 + L1VL4 LINE L1 261 1803 -1756 1 700 6005 112 45 3 chr13 15158537 15160168 -105124144 + L1_Mus3 LINE L1 4940 6638 0 1 700 12291 156 36 10 chr13 15160214 15162744 -105121568 + Lx2 LINE L1 2149 4744 -1142 1 700 8398 122 36 1 chr13 15162750 15164428 -105119884 + Lx2 LINE L1 5267 6996 -1 1 700 1507 286 37 12 chr13 15164450 15164958 -105119354 + L1M2 LINE L1 3965 4493 -1650 1 700 3131 42 39 0 chr13 15164958 15165339 -105118973 + MTA_Mm LTR MaLR 1 396 0 1 700 1507 286 37 12 chr13 15165339 15165485 -105118827 + L1M2 LINE L1 4494 4635 -1508 1 700 2330 178 52 31 chr13 15165502 15165902 -105118410 - RMER19B LTR ERVK -12 890 470 2 700 1223 68 0 64 chr13 15165902 15165989 -105118323 + L1_Mus2 LINE L1 6391 6477 -89 2 700 1280 186 108 27 chr13 15165989 15166321 -105117991 - RLTR10D LTR ERVK 0 359 1 2 700 1223 68 0 64 chr13 15166321 15166421 -105117891 + L1_Mus2 LINE L1 6478 6566 0 2 700 2330 178 52 31 chr13 15166421 15166467 -105117845 - RMER19B LTR ERVK -433 469 435 2 700 1005 181 148 5 chr13 15166471 15166688 -105117624 - Lx2B LINE L1 -497 6503 6256 2 700 1296 245 114 41 chr13 15166732 15167119 -105117193 + MTD LTR MaLR 3 417 -2 2 700 965 268 180 111 chr13 15167105 15167406 -105116906 + MTD-int LTR MaLR 1 310 -788 2 700 1311 73 39 16 chr13 15167406 15167588 -105116724 + B2_Mm2 SINE B2 2 187 -8 2 700 965 273 164 107 chr13 15167588 15168002 -105116310 + MTD-int LTR MaLR 311 853 -405 2 700 3428 103 0 7 chr13 15168017 15168554 -105115758 - L1_Mm LINE L1 -1729 4154 3622 2 700 2713 53 36 19 chr13 15168554 15168918 -105115394 + L1_Mus1 LINE L1 6198 6567 0 2 700 459 313 37 49 chr13 15169370 15169615 -105114697 + L1MEf LINE L1 2009 2250 -3992 2 700 503 325 30 45 chr13 15169796 15169996 -105114316 + B3A SINE B2 2 198 0 2 700 318 276 110 15 chr13 15170022 15170158 -105114154 + L1MEf LINE L1 2504 2652 -3494 2 700 210 169 0 48 chr13 15170202 15170264 -105114048 + A-rich Low_complexity Low_complexity 6 64 0 2 700 408 240 39 52 chr13 15170286 15170440 -105113872 + L1MEf LINE L1 2706 2857 -3289 2 700 228 341 103 40 chr13 15171119 15171293 -105113019 - L3b LINE CR1 -137 345 161 2 700 298 313 32 65 chr13 15172038 15172161 -105112151 - MER5A DNA MER1_type -18 171 53 2 700 741 245 68 11 chr13 15172526 15172714 -105111598 + MTD LTR MaLR 4 202 -217 2 700 814 244 29 53 chr13 15172714 15172922 -105111390 - MTD LTR MaLR 0 419 217 2 700 1875 286 46 74 chr13 15172924 15173685 -105110627 + MTC-int LTR MaLR 209 948 -310 2 700 225 0 0 0 chr13 15174010 15174035 -105110277 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 2 700 597 348 44 0 chr13 15174524 15174728 -105109584 - MER58A DNA MER1_type -11 213 1 2 700 21 0 0 0 chr13 15175294 15175315 -105108997 + AT_rich Low_complexity Low_complexity 1 21 0 2 700 1542 221 26 34 chr13 15175489 15175840 -105108472 + ORR1D1 LTR MaLR 27 374 0 2 700 194 0 39 0 chr13 15176267 15176293 -105108019 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 700 41 21 0 0 chr13 15177877 15177925 -105106387 + AT_rich Low_complexity Low_complexity 1 48 0 2 700 374 0 22 0 chr13 15177989 15178035 -105106277 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 2 700 1152 55 14 0 chr13 15178036 15178181 -105106131 - B1_Mus1 SINE Alu 0 148 2 2 700 1645 274 20 48 chr13 15178226 15178813 -105105499 - Lx9 LINE L1 -209 7435 6865 2 700 480 262 0 0 chr13 15178827 15178930 -105105382 - MTC LTR MaLR -46 375 273 2 700 504 317 136 11 chr13 15178930 15179195 -105105117 - Lx9 LINE L1 -812 6832 6535 2 700 515 250 72 67 chr13 15180697 15180769 -105103543 - MTEa LTR MaLR 0 379 315 2 700 2580 133 10 18 chr13 15180769 15181166 -105103146 + ORR1B1 LTR MaLR 1 394 0 2 700 515 276 79 61 chr13 15181166 15181355 -105102957 - MTEa LTR MaLR -65 314 91 2 700 305 277 42 21 chr13 15182002 15182146 -105102166 + L1M6 LINE L1 48 194 -6302 2 700 265 229 29 0 chr13 15182470 15182540 -105101772 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 2 700 240 189 57 0 chr13 15183959 15184012 -105100300 + GA-rich Low_complexity Low_complexity 3 58 0 2 700 298 297 11 0 chr13 15184015 15184106 -105100206 + L1MA4A LINE L1 5826 5917 -386 2 700 21 0 0 0 chr13 15184222 15184243 -105100069 + AT_rich Low_complexity Low_complexity 1 21 0 2 700 285 29 0 0 chr13 15184258 15184292 -105100020 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 700 740 332 53 8 chr13 15184748 15185124 -105099188 - Lx8 LINE L1 -255 7218 6826 2 700 410 294 72 29 chr13 15185168 15185188 -105099124 - Lx5 LINE L1 -16 7444 7424 2 700 207 0 0 0 chr13 15185188 15185211 -105099101 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2 700 630 278 36 16 chr13 15185211 15185406 -105098906 - Lx5 LINE L1 -15 7035 6838 2 700 1254 300 45 19 chr13 15185483 15186240 -105098072 + L1_Mur3 LINE L1 2413 3189 -2691 2 700 1516 290 28 18 chr13 15186263 15186941 -105097371 + L1_Mur3 LINE L1 3889 4573 -1307 2 700 1747 101 17 0 chr13 15186941 15187178 -105097134 + ORR1A2 LTR MaLR 79 319 -8 2 700 7350 192 32 47 chr13 15187182 15189186 -105095126 + ORR1A2-int LTR MaLR 1 1963 0 2 700 1923 113 14 0 chr13 15189186 15189468 -105094844 + ORR1A2 LTR MaLR 1 286 -41 2 700 5426 110 38 2 chr13 15189469 15190712 -105093600 + L1_Mus3 LINE L1 5176 6461 -177 2 700 2286 107 102 49 chr13 15190715 15191166 -105093146 - IAPLTR2_Mm LTR ERVK 0 475 1 2 700 5941 35 4 12 chr13 15191166 15191918 -105092394 - IAPEz-int LTR ERVK 0 6481 5736 2 700 2096 68 0 0 chr13 15191917 15192195 -105092117 - IAPEz-int LTR ERVK -4845 1636 1359 2 700 3366 66 18 15 chr13 15192195 15192995 -105091317 - IAPEz-int LTR ERVK -5819 662 9 2 700 2307 107 100 49 chr13 15192996 15193448 -105090864 - IAPLTR2_Mm LTR ERVK 0 475 1 2 700 912 97 45 7 chr13 15193448 15193603 -105090709 + L1_Mus3 LINE L1 6477 6637 -1 2 700 437 38 0 0 chr13 15193604 15193657 -105090655 + ORR1A2 LTR MaLR 274 326 0 2 700 369 315 98 30 chr13 15193666 15193869 -105090443 + L1ME3B LINE L1 2475 2691 -3455 2 700 386 323 179 30 chr13 15194041 15194303 -105090009 - MLT1A1 LTR MaLR -4 404 104 2 700 646 326 83 42 chr13 15194770 15195228 -105089084 + L1ME3B LINE L1 4899 5375 -771 2 700 2193 309 68 27 chr13 15195533 15196525 -105087787 - Lx8 LINE L1 -1 7472 6440 2 700 608 331 96 9 chr13 15196539 15196871 -105087441 + Lx8 LINE L1 6074 6434 -1039 2 700 301 299 53 79 chr13 15196884 15197073 -105087239 + L1ME3B LINE L1 5717 5900 -340 2 700 6489 102 18 9 chr13 15197099 15198091 -105086221 - Lx LINE L1 -2 6652 5652 2 700 327 330 55 38 chr13 15198126 15198309 -105086003 + L1MC4 LINE L1 7358 7543 -499 2 700 1236 285 5 39 chr13 15198441 15198853 -105085459 + Lx9 LINE L1 6732 7129 -515 2 700 350 340 9 0 chr13 15199009 15199115 -105085197 - PB1D10 SINE Alu -6 111 5 2 700 274 384 0 0 chr13 15199033 15199132 -105085180 - ID_B1 SINE B4 -57 167 69 2 700 1063 328 114 12 chr13 15201417 15202176 -105082136 + Lx8 LINE L1 6633 7468 -5 2 700 2407 279 102 32 chr13 15202370 15203118 -105081194 + Lx9 LINE L1 6264 7173 -471 2 700 2065 179 60 8 chr13 15203118 15203517 -105080795 + MTC LTR MaLR 2 421 0 2 700 2407 283 101 31 chr13 15203517 15203765 -105080547 + Lx9 LINE L1 7044 7424 -220 2 700 279 0 0 0 chr13 15203765 15203796 -105080516 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 700 1997 302 99 29 chr13 15203796 15203921 -105080391 + Lx9 LINE L1 7343 7464 -9 2 701 1313 261 29 19 chr13 15204491 15204807 -105079505 - ORR1D2 LTR MaLR 0 370 52 2 701 1164 35 28 0 chr13 15205140 15205282 -105079030 + B1_Mm SINE Alu 2 147 0 2 701 426 39 0 0 chr13 15205288 15205340 -105078972 + (GA)n Simple_repeat Simple_repeat 2 53 0 2 701 234 62 0 0 chr13 15205346 15205378 -105078934 + (GGA)n Simple_repeat Simple_repeat 2 33 0 2 701 207 0 0 0 chr13 15205953 15205976 -105078336 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 2 701 3046 173 251 7 chr13 15206975 15207234 -105077078 + RMER13A LTR ERVK 1 260 -600 2 701 1106 127 26 26 chr13 15207234 15207428 -105076884 + L1_Mus1 LINE L1 6374 6567 0 2 701 3046 173 251 7 chr13 15207428 15207844 -105076468 + RMER13A LTR ERVK 261 840 -20 2 701 360 0 0 0 chr13 15207897 15207937 -105076375 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 701 549 0 0 0 chr13 15207937 15207998 -105076314 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 2 701 768 294 0 33 chr13 15208139 15208181 -105076131 + B3A SINE B2 1 39 -159 2 701 2116 92 35 68 chr13 15208181 15208519 -105075793 + ORR1A2 LTR MaLR 1 327 0 2 701 768 262 31 84 chr13 15208519 15208701 -105075611 + B3A SINE B2 40 213 -3 2 701 288 0 0 0 chr13 15208709 15208741 -105075571 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 701 500 318 129 26 chr13 15208756 15209066 -105075246 + L1_Rod LINE L1 1243 1601 -4246 2 701 3468 18 5 0 chr13 15209066 15209460 -105074852 - MTA_Mm LTR MaLR 0 396 1 2 701 500 318 129 26 chr13 15209460 15210057 -105074255 + L1_Rod LINE L1 1602 2243 -3604 2 701 2201 196 31 17 chr13 15210058 15210577 -105073735 + RLTR11A2 LTR ERVK 1 526 -1 2 701 207 0 0 0 chr13 15211558 15211581 -105072731 + (T)n Simple_repeat Simple_repeat 1 23 0 2 701 270 0 0 0 chr13 15211581 15211611 -105072701 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 701 546 312 78 3 chr13 15211984 15212318 -105071994 + L1_Mur3 LINE L1 2560 2918 -3225 2 701 551 250 122 25 chr13 15212320 15212517 -105071795 + B3 SINE B2 1 216 0 2 701 6983 125 15 11 chr13 15212517 15213970 -105070342 + Lx LINE L1 5059 6654 0 2 701 452 283 142 16 chr13 15214042 15214408 -105069904 + L1_Mur3 LINE L1 3335 3746 -2134 2 701 1576 207 119 3 chr13 15214403 15214781 -105069531 + Lx9 LINE L1 6811 7232 -412 2 701 731 236 155 0 chr13 15215273 15215447 -105068865 - B3 SINE B2 0 216 16 2 701 32 26 0 0 chr13 15215677 15215716 -105068596 + AT_rich Low_complexity Low_complexity 1 39 0 2 701 23 0 0 0 chr13 15216505 15216528 -105067784 + AT_rich Low_complexity Low_complexity 1 23 0 2 701 747 195 6 38 chr13 15216794 15216954 -105067358 + Lx4B LINE L1 6898 7052 -6 2 701 2959 93 23 0 chr13 15217341 15217784 -105066528 + L1_Mus3 LINE L1 5939 6391 -247 2 701 2562 78 70 3 chr13 15217797 15218184 -105066128 + L1_Mus3 LINE L1 6214 6626 -12 2 701 874 273 79 30 chr13 15219109 15219438 -105064874 + RLTR42-int LTR ERVK 2561 2905 -2617 2 701 447 19 0 0 chr13 15220279 15220331 -105063981 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 701 380 362 25 10 chr13 15220787 15220985 -105063327 + MLT2C2 LTR ERVL 24 224 -240 2 701 250 296 0 90 chr13 15221181 15221259 -105063053 - ID4_ SINE ID -11 72 2 2 701 210 309 24 12 chr13 15221272 15221354 -105062958 - B1_Mm SINE Alu -8 139 57 2 701 333 215 21 0 chr13 15221393 15221486 -105062826 + Lx7 LINE L1 7602 7696 0 2 701 274 45 22 22 chr13 15223620 15223665 -105060647 + (GAAA)n Simple_repeat Simple_repeat 3 47 0 2 701 794 245 208 132 chr13 15224236 15224525 -105059787 + MT2A LTR ERVL 1 361 -240 2 701 564 56 0 0 chr13 15224525 15224597 -105059715 + (TTCC)n Simple_repeat Simple_repeat 4 75 0 2 701 794 250 159 98 chr13 15224597 15224830 -105059482 + MT2A LTR ERVL 200 462 -71 2 701 369 93 0 0 chr13 15224830 15224884 -105059428 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 701 188 111 28 0 chr13 15224885 15224921 -105059391 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2 701 770 245 208 132 chr13 15224921 15224954 -105059358 + MT2A LTR ERVL 544 596 -5 2 701 340 238 38 0 chr13 15225389 15225469 -105058843 + ID4_ SINE ID 1 83 0 2 701 3510 163 133 30 chr13 15225496 15226269 -105058043 + RLTR25B LTR ERVK 1 853 -175 2 701 833 198 165 41 chr13 15226611 15226853 -105057459 + RLTR25B LTR ERVK 757 1028 0 2 701 807 169 11 6 chr13 15226993 15227171 -105057141 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 701 455 289 50 44 chr13 15228394 15228553 -105055759 + B4 SINE B4 96 255 -37 2 701 5597 121 8 14 chr13 15228553 15230176 -105054136 + L1Md_A LINE L1 481 2038 -3845 2 701 3540 69 24 2 chr13 15230177 15230684 -105053628 + L1Md_A LINE L1 3332 3849 -2034 2 701 897 0 9 0 chr13 15230681 15230796 -105053516 + L1Md_F2 LINE L1 417 532 -6192 2 701 34723 27 0 0 chr13 15230788 15235521 -105048791 + L1Md_F2 LINE L1 854 5586 -297 2 701 7710 65 5 3 chr13 15235521 15236514 -105047798 + L1Md_F2 LINE L1 5587 6581 -1 2 701 240 325 24 48 chr13 15236542 15236668 -105047644 - RMER12 LTR ERVK -476 846 724 2 701 351 326 138 5 chr13 15236687 15236875 -105047437 + L1MC1 LINE L1 5863 6075 -258 3 701 696 244 71 0 chr13 15236876 15237044 -105047268 + MTEb LTR MaLR 1 180 -199 3 701 1563 159 33 77 chr13 15237436 15237865 -105046447 + RMER17C LTR ERVK 1 410 0 3 701 2158 201 94 20 chr13 15237867 15238421 -105045891 + RMER17C-int LTR ERVK 2 596 -2642 3 701 434 125 0 0 chr13 15238834 15238914 -105045398 + L1_Mus2 LINE L1 6487 6566 0 3 701 2358 145 49 161 chr13 15239616 15240332 -105043980 + RMER17C-int LTR ERVK 1388 2023 -1215 3 701 1035 126 49 0 chr13 15240351 15240534 -105043778 + RMER17C-int LTR ERVK 2159 2350 -888 3 701 2825 140 193 14 chr13 15240531 15240792 -105043520 + RMER17C-int LTR ERVK 2532 2898 -340 3 701 477 0 0 0 chr13 15240792 15240845 -105043467 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 701 2825 140 193 14 chr13 15240845 15241175 -105043137 + RMER17C-int LTR ERVK 2899 3228 -10 3 701 1689 195 22 55 chr13 15241186 15241416 -105042896 + RMER17C LTR ERVK 16 398 -560 3 701 645 9 79 0 chr13 15241416 15241530 -105042782 + (TTC)n Simple_repeat Simple_repeat 3 125 0 3 701 1689 189 22 47 chr13 15241530 15241752 -105042560 + RMER17C LTR ERVK 190 410 0 3 701 1839 181 29 66 chr13 15241771 15242371 -105041941 + L1_Rod LINE L1 868 1448 -4399 3 701 1301 224 20 98 chr13 15242362 15242619 -105041693 + L1_Rod LINE L1 2249 2508 -3339 3 701 592 229 83 8 chr13 15242619 15242751 -105041561 + B1_Mur3 SINE Alu 2 143 -6 3 701 1301 224 20 98 chr13 15242751 15242983 -105041329 + L1_Rod LINE L1 2509 2700 -3147 3 701 4092 230 65 61 chr13 15243177 15243293 -105041019 + Lx9 LINE L1 6306 6434 -1210 3 701 6520 59 7 18 chr13 15243293 15244142 -105040170 + L1Md_F2 LINE L1 5743 6582 0 3 701 4092 230 65 61 chr13 15244142 15245357 -105038955 + Lx9 LINE L1 6435 7642 -2 3 701 354 350 24 18 chr13 15245366 15245532 -105038780 + L1MC3 LINE L1 7376 7542 -243 3 701 468 319 84 18 chr13 15245567 15245733 -105038579 + B3A SINE B2 5 181 -17 3 701 249 316 0 102 chr13 15245845 15245972 -105038340 + B3A SINE B2 69 182 -16 3 701 230 265 39 0 chr13 15245998 15246100 -105038212 + L1MC3 LINE L1 7577 7682 -103 3 701 413 333 113 39 chr13 15246898 15247154 -105037158 + MLT1H LTR MaLR 100 374 -175 3 701 387 105 0 0 chr13 15247777 15247834 -105036478 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 701 198 0 0 0 chr13 15248360 15248382 -105035930 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 701 851 92 6 19 chr13 15248446 15248602 -105035710 + (TCTA)n Simple_repeat Simple_repeat 1 154 0 3 701 1101 72 0 0 chr13 15248940 15249078 -105035234 + B1_Mus2 SINE Alu 1 138 -9 3 701 189 74 0 0 chr13 15249078 15249105 -105035207 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 701 198 0 0 0 chr13 15249353 15249375 -105034937 + (T)n Simple_repeat Simple_repeat 1 22 0 3 701 1807 256 80 21 chr13 15249375 15250045 -105034267 - RMER1B Other Other 0 1066 1 3 701 378 0 0 0 chr13 15250111 15250153 -105034159 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 701 377 326 54 8 chr13 15250161 15250291 -105034021 - ID_B1 SINE B4 -9 215 80 3 701 286 273 134 18 chr13 15250961 15251125 -105033187 + ORR1E LTR MaLR 71 253 -106 3 701 7021 85 56 3 chr13 15252198 15253179 -105031133 - RLTR13D4 LTR ERVK 0 1033 1 3 701 985 138 147 10 chr13 15253428 15253626 -105030686 - URR1A DNA MER1_type 0 226 2 3 701 495 244 120 15 chr13 15253784 15253917 -105030395 + MTD LTR MaLR 16 162 -257 3 701 1892 215 36 13 chr13 15253991 15254523 -105029789 - L1_Rod LINE L1 -3020 2827 2284 3 701 207 0 0 0 chr13 15254527 15254550 -105029762 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 701 32873 85 5 8 chr13 15254552 15260517 -105023795 - L1Md_F2 LINE L1 -11 6571 626 3 701 1243 248 35 2 chr13 15260519 15260919 -105023393 - L1_Rod LINE L1 -3549 2298 1886 3 701 27 49 0 0 chr13 15261029 15261070 -105023242 + AT_rich Low_complexity Low_complexity 1 41 0 3 701 375 127 0 0 chr13 15262543 15262606 -105021706 + (TTTTTG)n Simple_repeat Simple_repeat 3 65 0 3 701 295 288 110 0 chr13 15263574 15263692 -105020620 + ID_B1 SINE B4 94 224 0 3 701 3879 68 0 6 chr13 15263903 15264403 -105019909 + L1_Mus1 LINE L1 6070 6566 -1 3 701 220 133 0 22 chr13 15265402 15265448 -105018864 + A-rich Low_complexity Low_complexity 2 46 0 3 701 499 238 64 29 chr13 15265448 15265621 -105018691 + Lx9 LINE L1 5870 6048 -1596 3 701 969 88 0 0 chr13 15265651 15265788 -105018524 + (GAA)n Simple_repeat Simple_repeat 3 139 0 3 701 4796 229 59 16 chr13 15265850 15267014 -105017298 + Lx9 LINE L1 6312 7478 -166 3 701 333 0 0 0 chr13 15267014 15267051 -105017261 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 701 4796 229 59 16 chr13 15267051 15267158 -105017154 + Lx9 LINE L1 7479 7637 -7 3 701 7318 31 2 3 chr13 15267196 15268106 -105016206 - L1_Mus1 LINE L1 -1 6566 5658 3 701 1482 191 117 3 chr13 15268285 15268634 -105015678 + ORR1D1 LTR MaLR 6 374 0 3 701 1040 273 97 24 chr13 15268638 15269071 -105015241 + L1MA6 LINE L1 5493 5963 -337 3 701 2568 174 31 14 chr13 15269071 15269589 -105014723 + RLTR11A2 LTR ERVK 1 527 0 3 701 1040 282 208 13 chr13 15269589 15269849 -105014463 + L1MA6 LINE L1 5964 6269 -22 3 701 290 320 167 0 chr13 15270030 15270180 -105014132 - MER5A DNA MER1_type -8 181 7 3 701 1226 54 0 0 chr13 15270496 15270643 -105013669 + B1_Mm SINE Alu 1 147 0 3 701 458 323 9 150 chr13 15270679 15270905 -105013407 + B3 SINE B2 10 203 -13 3 701 191 333 70 0 chr13 15272629 15272686 -105011626 + MIRm SINE MIR 22 82 -194 3 701 487 360 86 11 chr13 15272843 15273191 -105011121 + L2 LINE L2 2683 3056 -363 3 701 309 254 0 0 chr13 15273474 15273541 -105010771 + RMER15 LTR ERVL 422 488 -87 3 701 378 0 0 0 chr13 15274494 15274536 -105009776 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 701 579 303 0 27 chr13 15274545 15274691 -105009621 - RSINE1 SINE B4 -21 144 3 3 701 817 114 0 0 chr13 15274722 15274845 -105009467 - RLTR11B LTR ERVK 0 453 331 3 701 451 270 71 28 chr13 15274855 15275003 -105009309 - MLT1A0 LTR MaLR -2 388 228 3 701 242 95 24 0 chr13 15275208 15275250 -105009062 + (TTTG)n Simple_repeat Simple_repeat 1 43 0 3 701 405 249 109 2 chr13 15275250 15275383 -105008929 - B1F1 SINE Alu -1 148 6 3 701 257 241 78 33 chr13 15275371 15275461 -105008851 - MLT1A0 LTR MaLR -306 102 9 3 701 285 29 0 0 chr13 15276867 15276901 -105007411 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 701 228 127 30 45 chr13 15276902 15276968 -105007344 + (TATAA)n Simple_repeat Simple_repeat 5 69 0 3 701 2278 108 3 3 chr13 15277429 15277754 -105006558 + ORR1A2 LTR MaLR 1 325 -2 3 701 1025 249 108 7 chr13 15277883 15278170 -105006142 + Lx8 LINE L1 6484 6799 -674 3 701 2147 293 76 32 chr13 15278341 15279091 -105005221 - Lx9 LINE L1 -458 7186 6399 3 701 1022 241 115 156 chr13 15279091 15279475 -105004837 + ORR1D2 LTR MaLR 1 368 -2 3 701 2147 293 76 32 chr13 15279475 15279496 -105004816 - Lx9 LINE L1 -1246 6398 6381 3 701 1760 283 82 40 chr13 15279500 15280000 -105004312 + Lx8 LINE L1 6814 7329 -144 3 701 192 40 0 0 chr13 15280000 15280025 -105004287 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 701 267 93 0 0 chr13 15280032 15280075 -105004237 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 3 701 1760 283 82 40 chr13 15280075 15280191 -105004121 + Lx8 LINE L1 7355 7463 -10 3 701 283 296 82 0 chr13 15280461 15280559 -105003753 + MIRb SINE MIR 83 188 -80 3 701 1751 157 26 99 chr13 15280720 15281103 -105003209 - ORR1B1 LTR MaLR -2 417 41 3 701 978 240 15 5 chr13 15281173 15281370 -105002942 + B3 SINE B2 2 200 -16 3 701 334 38 19 19 chr13 15281370 15281423 -105002889 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 3 701 23 33 0 0 chr13 15281597 15281627 -105002685 + AT_rich Low_complexity Low_complexity 1 30 0 3 701 1382 261 21 21 chr13 15283175 15283512 -105000800 - MTE2a LTR MaLR -3 376 40 3 701 261 287 48 190 chr13 15284063 15284373 -104999939 - MLT1J LTR MaLR -54 458 193 3 701 228 333 69 0 chr13 15284397 15284484 -104999828 - MLT2B3 LTR ERVL 0 567 475 3 701 906 293 122 12 chr13 15284466 15284922 -104999390 - MLT2B3 LTR ERVL -37 680 118 3 701 4527 84 21 0 chr13 15285033 15285605 -104998707 - MT2B2 LTR ERVL 0 584 1 3 701 343 275 137 76 chr13 15287659 15287856 -104996456 + B3A SINE B2 8 216 0 3 701 839 64 9 0 chr13 15288593 15288703 -104995609 - B1_Mm SINE Alu -36 111 1 3 701 535 269 55 7 chr13 15288703 15288736 -104995576 - B4 SINE B4 -87 202 53 3 701 11664 148 23 47 chr13 15289577 15290729 -104993583 + Lx2 LINE L1 3760 4857 -1020 3 701 3659 87 11 2 chr13 15290729 15291204 -104993108 - L1_Mus3 LINE L1 0 6638 6160 3 701 11664 129 14 56 chr13 15291204 15292994 -104991318 + Lx2 LINE L1 4858 6599 -398 3 701 562 138 19 1 chr13 15292994 15293093 -104991219 + Lx2 LINE L1 6765 6851 -146 3 701 1211 68 0 0 chr13 15293093 15293241 -104991071 + IAP-d-int LTR ERVK 845 992 -995 3 701 524 302 40 22 chr13 15293266 15293656 -104990656 + IAP-d-int LTR ERVK 822 1566 -6015 3 701 1444 116 97 25 chr13 15293656 15293894 -104990418 + IAP-d-int LTR ERVK 5001 5255 -1287 3 701 4218 117 11 1 chr13 15293894 15294575 -104989737 + IAPEY3-int LTR ERVK 6965 7680 0 3 701 2772 19 151 3 chr13 15294575 15294893 -104989419 + RLTR10B2 LTR ERVK 1 365 0 3 701 5441 74 22 12 chr13 15294893 15295581 -104988731 + L1Md_F2 LINE L1 5886 6580 -2 3 701 1819 247 31 71 chr13 15295597 15296115 -104988197 - ORR1D2-int LTR MaLR -845 525 29 3 701 1086 278 64 3 chr13 15296120 15296402 -104987910 - ORR1D2 LTR MaLR -66 304 6 3 701 651 333 56 8 chr13 15297525 15297791 -104986521 - ORR1D2 LTR MaLR 0 374 96 3 701 567 29 0 0 chr13 15297801 15297870 -104986442 + (TTTTA)n Simple_repeat Simple_repeat 2 70 0 3 701 1130 37 0 0 chr13 15297872 15298008 -104986304 - B1_Mus1 SINE Alu -6 142 7 3 701 433 221 29 9 chr13 15298012 15298117 -104986195 - ORR1D2 LTR MaLR -263 107 1 3 701 1671 258 145 7 chr13 15298117 15298656 -104985656 - ORR1D2-int LTR MaLR 0 1370 758 3 701 1518 249 30 0 chr13 15298648 15298978 -104985334 - ORR1D2-int LTR MaLR -976 394 55 3 701 1341 265 78 9 chr13 15299010 15299356 -104984956 - ORR1D2 LTR MaLR 0 370 1 3 701 319 270 42 34 chr13 15301127 15301246 -104983066 + MER103 DNA DNA 3 122 -44 3 701 198 0 0 0 chr13 15303346 15303368 -104980944 + (TTG)n Simple_repeat Simple_repeat 3 24 0 3 701 1627 178 154 61 chr13 15303385 15303793 -104980519 + RLTR41 LTR ERV1 1 446 0 3 701 234 0 0 0 chr13 15305229 15305255 -104979057 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 701 342 380 96 62 chr13 15307695 15308000 -104976312 - MLT1E1A LTR MaLR -17 663 345 3 701 2640 41 66 98 chr13 15308000 15308377 -104975935 - RLTR10B2 LTR ERVK 0 365 1 3 701 342 380 96 62 chr13 15308377 15308425 -104975887 - MLT1E1A LTR MaLR -336 344 298 3 701 8340 67 17 3 chr13 15308484 15310307 -104974005 - L1_Mus1 LINE L1 0 6567 4721 3 701 321 26 0 0 chr13 15310342 15310380 -104973932 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 701 261 0 0 0 chr13 15310380 15310408 -104973904 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 701 311 299 154 63 chr13 15310640 15310926 -104973386 - MLT1D LTR MaLR -66 439 128 3 701 270 0 0 0 chr13 15310934 15310964 -104973348 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 3 701 668 248 15 0 chr13 15311000 15311133 -104973179 - B1_Mur1 SINE Alu -9 140 6 3 701 407 295 50 59 chr13 15311031 15311150 -104973162 - B4 SINE B4 -94 198 81 3 701 584 320 28 0 chr13 15311169 15311347 -104972965 - B3A SINE B2 -15 183 1 3 701 310 274 43 108 chr13 15311347 15311486 -104972826 - MLT1D LTR MaLR -373 132 3 3 701 206 289 39 0 chr13 15311515 15311567 -104972745 + MER5A DNA MER1_type 136 189 0 3 701 3170 65 15 15 chr13 15312307 15312711 -104971601 - L1Md_F2 LINE L1 0 6582 6179 3 701 2232 49 0 0 chr13 15312711 15312977 -104971335 + L1Md_F2 LINE L1 5925 6190 -392 3 701 22 70 0 0 chr13 15313434 15313477 -104970835 + AT_rich Low_complexity Low_complexity 1 43 0 3 701 499 295 22 44 chr13 15315024 15315205 -104969107 - RMER1C Other Other -505 837 661 4 701 809 326 39 78 chr13 15315201 15315610 -104968702 + RMER1C Other Other 656 1048 -294 4 701 1942 159 118 0 chr13 15315633 15315693 -104968619 - Lx2B LINE L1 -989 6011 5912 4 701 330 26 0 0 chr13 15315693 15315732 -104968580 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 4 701 2388 76 3 0 chr13 15315732 15316035 -104968277 - Lx3_Mus LINE L1 -1101 5908 5605 4 701 6888 110 32 0 chr13 15316035 15317004 -104967308 + Lx3A LINE L1 5969 6968 -13 4 701 243 0 0 0 chr13 15317004 15317031 -104967281 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 701 978 222 139 36 chr13 15317034 15317314 -104966998 + RMER1C Other Other 1034 1342 0 4 701 1630 222 26 6 chr13 15317321 15317665 -104966647 + Lx9 LINE L1 6994 7344 -300 4 701 1886 164 14 133 chr13 15317665 15318100 -104966212 + ORR1B1 LTR MaLR 12 394 0 4 701 385 145 108 0 chr13 15318118 15318201 -104966111 + Lx9 LINE L1 7402 7493 -151 4 701 369 176 165 16 chr13 15318276 15318293 -104966019 + Lx9 LINE L1 7497 7513 -131 4 701 237 108 0 0 chr13 15318293 15318330 -104965982 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 701 369 176 165 16 chr13 15318330 15318433 -104965879 + Lx9 LINE L1 7514 7634 -10 4 701 23 0 0 0 chr13 15318433 15318456 -104965856 + AT_rich Low_complexity Low_complexity 1 23 0 4 701 687 297 108 0 chr13 15319234 15319470 -104964842 + MTE2a LTR MaLR 3 273 -106 4 701 4478 236 35 79 chr13 15319836 15321177 -104963135 + RMER1A Other Other 1 888 -142 4 701 441 0 0 0 chr13 15321177 15321226 -104963086 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 701 4478 215 44 75 chr13 15321226 15321344 -104962968 + RMER1A Other Other 889 1027 -3 4 701 2314 208 114 6 chr13 15322638 15323171 -104961141 + Lx7 LINE L1 6210 6800 -896 4 701 9599 86 22 4 chr13 15323150 15323814 -104960498 - L1_Mur1 LINE L1 -534 5352 4668 4 701 342 0 0 0 chr13 15323814 15323852 -104960460 + (TTG)n Simple_repeat Simple_repeat 2 39 0 4 701 9599 86 22 4 chr13 15323852 15324572 -104959740 - L1_Mur1 LINE L1 -1219 4667 3943 4 701 8347 115 31 20 chr13 15324577 15326184 -104958128 + Lx3A LINE L1 5341 6965 -16 4 701 239 0 32 0 chr13 15326186 15326217 -104958095 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 4 701 3212 211 10 43 chr13 15326223 15326925 -104957387 + Lx7 LINE L1 6781 7459 -237 4 701 501 17 0 0 chr13 15326929 15326987 -104957325 + (TCC)n Simple_repeat Simple_repeat 2 59 0 4 701 1276 274 18 12 chr13 15326990 15327319 -104956993 + Lx6 LINE L1 7125 7455 -5 4 701 245 253 64 32 chr13 15327336 15327348 -104956964 + RMER1C Other Other 174 185 -1157 4 701 625 227 7 7 chr13 15327348 15327490 -104956822 - Lx6 LINE L1 -18 7442 7301 4 701 943 134 27 50 chr13 15327490 15327655 -104956657 + RMER1A Other Other 759 911 -119 4 701 552 224 16 8 chr13 15327692 15327818 -104956494 + RMER1A Other Other 899 1025 -5 4 701 186 103 0 0 chr13 15327850 15327879 -104956433 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 4 701 3297 176 26 18 chr13 15327899 15328516 -104955796 + L1_Mur3 LINE L1 5127 5748 -132 4 701 6719 67 0 19 chr13 15328517 15329406 -104954906 + L1Md_Gf LINE L1 271 1142 -5380 4 701 14429 20 2 0 chr13 15331998 15333761 -104950551 + L1Md_T LINE L1 3821 5586 -297 4 701 8224 32 16 1 chr13 15333761 15334741 -104949571 + L1Md_T LINE L1 5587 6581 -1 4 87 5941 225 98 22 chr13 15334752 15336370 -104947942 + Lx6 LINE L1 5720 7459 -1 4 702 5081 176 40 89 chr13 15336376 15337513 -104946799 - MTC-int LTR MaLR -175 1083 3 4 702 2366 139 78 23 chr13 15337513 15337911 -104946401 - MTC LTR MaLR 0 421 2 4 702 331 291 127 7 chr13 15337984 15338126 -104946186 + Lx7 LINE L1 6614 6772 -924 4 702 3230 217 36 31 chr13 15338183 15339097 -104945215 + L1_Rod LINE L1 4630 5548 -299 4 702 28396 81 1 5 chr13 15339101 15344097 -104940215 + L1Md_Gf LINE L1 199 5271 -615 4 702 1712 202 7 9 chr13 15344097 15344536 -104939776 + L1Md_F LINE L1 4 441 -6078 4 702 324 181 14 0 chr13 15344528 15344600 -104939712 + L1Md_F LINE L1 369 441 -6078 4 702 401 189 0 0 chr13 15344590 15344664 -104939648 + Lx9 LINE L1 261 334 -6282 4 702 32742 30 1 0 chr13 15345051 15349181 -104935131 + L1Md_T LINE L1 1455 5586 -297 4 702 8041 55 0 0 chr13 15349181 15350177 -104934135 + L1Md_T LINE L1 5587 6582 0 4 702 2596 165 60 36 chr13 15350181 15350510 -104933802 + Lx9 LINE L1 5252 5586 -297 4 702 8164 42 1 2 chr13 15350510 15351493 -104932819 + L1Md_F2 LINE L1 5587 6568 -14 4 702 216 0 0 0 chr13 15351497 15351521 -104932791 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 702 2596 212 72 34 chr13 15351521 15352025 -104932287 + Lx9 LINE L1 5587 6111 -1533 4 702 182 196 0 38 chr13 15352067 15352120 -104932192 + (CATATA)n Simple_repeat Simple_repeat 1 51 0 4 702 190 56 56 0 chr13 15352303 15352339 -104931973 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 4 702 1332 246 9 94 chr13 15352567 15353025 -104931287 - RLTR31_Mur LTR ERVK 0 553 135 4 702 930 168 52 5 chr13 15353227 15353419 -104930893 + Lx9 LINE L1 6454 6654 0 4 702 1124 262 99 108 chr13 15353786 15354243 -104930069 - Lx9 LINE L1 -291 7353 6927 4 702 555 16 0 0 chr13 15354243 15354307 -104930005 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 4 702 612 0 0 0 chr13 15354307 15354375 -104929937 + (GGGA)n Simple_repeat Simple_repeat 3 70 0 4 702 1124 262 99 108 chr13 15354375 15354571 -104929741 - Lx9 LINE L1 -718 6926 6706 4 702 638 308 36 4 chr13 15354578 15354803 -104929509 - Lx9 LINE L1 -1088 6556 6325 4 702 1583 225 63 0 chr13 15354812 15355225 -104929087 - Lx9 LINE L1 -9 7635 7197 4 702 6160 241 56 78 chr13 15355496 15356885 -104927427 - Lx9 LINE L1 -1693 5951 4471 4 702 801 102 174 25 chr13 15356885 15357046 -104927266 - B2_Mm2 SINE B2 -7 188 4 4 702 6160 240 51 80 chr13 15357046 15357958 -104926354 - Lx9 LINE L1 -1377 4470 3651 4 702 234 0 0 0 chr13 15357958 15357984 -104926328 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 702 6160 240 51 80 chr13 15357984 15358459 -104925853 - Lx9 LINE L1 -2197 3650 3199 4 702 1353 130 44 106 chr13 15358463 15358606 -104925706 + RLTR44C LTR ERVK 226 358 -144 4 702 1737 63 0 0 chr13 15358606 15358827 -104925485 - L1Md_T LINE L1 0 6582 6362 4 702 1353 130 44 106 chr13 15358827 15358976 -104925336 + RLTR44C LTR ERVK 359 500 -2 4 702 31991 72 0 18 chr13 15358998 15364171 -104920141 + L1Md_F2 LINE L1 508 5586 -297 4 702 8191 47 0 1 chr13 15364171 15365167 -104919145 + L1Md_F2 LINE L1 5587 6581 -1 4 702 235 267 110 45 chr13 15365173 15365373 -104918939 - Lx9 LINE L1 -2659 3188 2976 4 702 4283 69 41 15 chr13 15365375 15365964 -104918348 - L1Md_F2 LINE L1 -1 6581 5978 4 702 380 200 0 0 chr13 15365964 15366054 -104918258 - L1Md_F LINE L1 -6046 473 384 4 702 2376 233 63 33 chr13 15366055 15366501 -104917811 - Lx9 LINE L1 -2866 2981 2531 4 702 3502 20 0 2 chr13 15366501 15366898 -104917414 + MTA_Mm LTR MaLR 1 396 0 4 702 9727 10 2 0 chr13 15366898 15367994 -104916318 + MTA_Mm-int LTR MaLR 1 1098 0 4 702 3494 23 2 0 chr13 15367994 15368389 -104915923 + MTA_Mm LTR MaLR 1 396 0 4 702 2376 233 63 33 chr13 15368389 15368818 -104915494 - Lx9 LINE L1 -3317 2530 2080 4 702 21 36 0 0 chr13 15369092 15369120 -104915192 + AT_rich Low_complexity Low_complexity 1 28 0 4 702 261 0 0 0 chr13 15369838 15369867 -104914445 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 4 702 1328 266 49 23 chr13 15370112 15370719 -104913593 + L1_Mur3 LINE L1 2263 2885 -2995 4 702 530 141 164 0 chr13 15370764 15370892 -104913420 - MYSERV16_I-int LTR ERVK -1105 1221 1073 4 702 4173 147 65 44 chr13 15370899 15371761 -104912551 - MYSERV16_I-int LTR ERVK -1393 933 47 4 702 6080 132 67 37 chr13 15371761 15372843 -104911469 + RLTR13D3 LTR ERVK 1 1114 0 4 702 4173 246 36 93 chr13 15372843 15373072 -104911240 - MYSERV16_I-int LTR ERVK -2280 46 2 4 702 3801 203 42 61 chr13 15373133 15374000 -104910312 + RMER13A LTR ERVK 11 860 0 4 702 21 0 0 0 chr13 15374091 15374112 -104910200 + AT_rich Low_complexity Low_complexity 1 21 0 4 702 1954 183 44 95 chr13 15375148 15375218 -104909094 - RLTR20A1 LTR ERVK -25 526 444 4 702 336 48 0 0 chr13 15375218 15375260 -104909052 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 702 1954 183 44 95 chr13 15375260 15375738 -104908574 - RLTR20A1 LTR ERVK -108 443 6 4 702 4949 142 33 4 chr13 15376107 15376918 -104907394 + ORR1A2-int LTR MaLR 1117 1951 -12 4 702 2319 109 12 0 chr13 15376923 15377244 -104907068 + ORR1A2 LTR MaLR 1 325 -2 4 702 22 35 0 0 chr13 15377251 15377280 -104907032 + AT_rich Low_complexity Low_complexity 1 29 0 4 702 1851 208 8 11 chr13 15377778 15378157 -104906155 - ORR1C1 LTR MaLR 0 378 1 4 702 305 302 101 45 chr13 15378381 15378579 -104905733 - RLTR15 LTR ERVK -93 266 58 4 702 202 85 61 41 chr13 15378737 15378786 -104905526 + T-rich Low_complexity Low_complexity 4 53 0 4 702 556 194 0 10 chr13 15378823 15378927 -104905385 + ORR1C1 LTR MaLR 1 103 -275 4 702 17284 166 45 81 chr13 15379774 15381993 -104902319 + Lx2 LINE L1 779 2873 -3013 4 702 693 92 0 0 chr13 15381993 15382091 -104902221 + (GAAA)n Simple_repeat Simple_repeat 3 100 0 4 702 17284 178 48 101 chr13 15382091 15383113 -104901199 + Lx2 LINE L1 2874 3990 -1896 4 702 2628 103 64 9 chr13 15383113 15383534 -104900778 + L1_Mus4 LINE L1 6192 6635 -1 4 702 17284 178 48 101 chr13 15383534 15384788 -104899524 + Lx2 LINE L1 3991 5049 -837 4 702 5526 122 17 2 chr13 15384788 15385632 -104898680 + Lx LINE L1 5798 6653 -1 4 702 17284 150 29 32 chr13 15385632 15387592 -104896720 + Lx2 LINE L1 5050 6997 0 4 702 3983 214 53 42 chr13 15387748 15388369 -104895943 + Lx7 LINE L1 6614 7259 -437 4 702 1977 113 39 3 chr13 15388369 15388679 -104895633 - Lx LINE L1 -15 6639 6319 4 702 3983 214 53 42 chr13 15388679 15389118 -104895194 + Lx7 LINE L1 7260 7685 -11 4 702 21 0 0 0 chr13 15389143 15389164 -104895148 + AT_rich Low_complexity Low_complexity 1 21 0 4 702 3175 233 57 10 chr13 15389182 15390171 -104894141 + L1_Mur3 LINE L1 3423 4457 -1423 4 702 183 80 0 0 chr13 15392043 15392068 -104892244 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 702 306 50 0 0 chr13 15392157 15392197 -104892115 - L1_Mm LINE L1 -400 5483 5444 4 702 2833 74 0 3 chr13 15392197 15392564 -104891748 + L1_Mus1 LINE L1 6200 6565 -2 4 702 25 31 0 0 chr13 15393143 15393175 -104891137 + AT_rich Low_complexity Low_complexity 1 32 0 4 702 616 263 112 10 chr13 15394757 15394953 -104889359 + B3 SINE B2 1 216 0 4 702 471 127 0 14 chr13 15395402 15395474 -104888838 + PB1D9 SINE Alu 5 75 -45 4 702 325 290 56 100 chr13 15395474 15395582 -104888730 + B4 SINE B4 90 261 -31 4 702 332 200 28 138 chr13 15395582 15395640 -104888672 + L1_Mur1 LINE L1 81 124 -6860 4 702 369 0 0 0 chr13 15395640 15395681 -104888631 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 702 5578 249 80 41 chr13 15395681 15398471 -104885841 + L1_Mur1 LINE L1 125 4668 -1218 4 702 207 0 0 0 chr13 15398471 15398494 -104885818 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 702 5578 222 68 26 chr13 15398494 15399077 -104885235 + L1_Mur1 LINE L1 4623 5277 -609 4 702 469 332 26 70 chr13 15399089 15399361 -104884951 - L1M5 LINE L1 -2843 3303 3044 4 702 458 322 99 6 chr13 15399377 15399690 -104884622 + Lx8 LINE L1 7072 7413 -60 4 702 396 0 0 0 chr13 15399690 15399734 -104884578 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 702 27 23 0 22 chr13 15399963 15399975 -104884337 + AT_rich Low_complexity Low_complexity 1 12 0 4 702 1204 42 0 0 chr13 15399975 15400117 -104884195 + B1_Mus1 SINE Alu 1 142 -6 4 702 27 23 0 22 chr13 15400117 15400149 -104884163 + AT_rich Low_complexity Low_complexity 1 32 0 4 702 1684 216 88 3 chr13 15400580 15400966 -104883346 + MTD LTR MaLR 1 419 0 4 702 22 56 0 0 chr13 15401582 15401618 -104882694 + AT_rich Low_complexity Low_complexity 1 36 0 4 702 337 234 62 45 chr13 15401669 15401781 -104882531 + B4A SINE B4 6 119 -173 4 702 639 0 0 0 chr13 15401871 15401942 -104882370 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 4 702 516 32 0 0 chr13 15402056 15402118 -104882194 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 4 702 28 71 0 0 chr13 15402197 15402253 -104882059 + AT_rich Low_complexity Low_complexity 1 56 0 4 702 236 75 0 0 chr13 15402881 15402921 -104881391 + L1M5 LINE L1 2867 2906 -3240 4 702 337 291 17 68 chr13 15402962 15403080 -104881232 + PB1D10 SINE Alu 1 112 -5 4 702 648 150 0 8 chr13 15403149 15403277 -104881035 - MYSERV16_I-int LTR ERVK -1148 1178 1052 5 702 1372 90 5 0 chr13 15403278 15403466 -104880846 - B2_Mm1a SINE B2 -3 190 2 5 702 372 288 56 44 chr13 15403491 15403651 -104880661 - RMER4A LTR ERVK -44 422 261 5 702 309 191 15 31 chr13 15403681 15403746 -104880566 - MurERV4_19-int LTR ERVK -443 5337 5274 5 702 1382 214 88 86 chr13 15403853 15404261 -104880051 + RLTR11A LTR ERVK 1 409 -119 5 702 488 30 15 0 chr13 15404261 15404327 -104879985 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 702 747 154 17 8 chr13 15404586 15404704 -104879608 + B1_Mur2 SINE Alu 23 141 -8 5 702 217 0 61 0 chr13 15404704 15404737 -104879575 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 702 21167 143 10 119 chr13 15405702 15409958 -104874354 + Lx LINE L1 613 4214 -1669 5 702 6163 30 0 0 chr13 15409958 15410671 -104873641 + L1Md_T LINE L1 5870 6582 0 5 702 21167 123 29 80 chr13 15410671 15413064 -104871248 + Lx LINE L1 4215 6642 -12 5 702 24 0 0 0 chr13 15413160 15413184 -104871128 + AT_rich Low_complexity Low_complexity 1 24 0 5 702 5684 238 73 35 chr13 15413184 15414256 -104870056 + L1_Rod LINE L1 2229 3384 -2463 5 702 528 16 0 0 chr13 15414256 15414317 -104869995 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 5 702 5684 238 73 35 chr13 15414317 15415380 -104868932 + L1_Rod LINE L1 3385 4445 -1402 5 702 541 198 44 19 chr13 15415426 15415586 -104868726 + L1_Rod LINE L1 4690 4853 -994 5 702 1392 255 29 21 chr13 15415601 15415941 -104868371 + ORR1D2 LTR MaLR 3 345 -25 5 702 393 248 58 0 chr13 15416045 15416166 -104868146 + L1_Mur3 LINE L1 3663 3790 -2090 5 702 3073 17 0 0 chr13 15416204 15416550 -104867762 - ORR1A0 LTR MaLR 0 346 1 5 702 509 208 10 10 chr13 15417103 15417205 -104867107 - PB1D10 SINE Alu -13 104 3 5 702 495 288 0 80 chr13 15417419 15417570 -104866742 + AmnSINE1 SINE SINE 412 550 -25 5 702 4875 163 19 19 chr13 15418282 15419190 -104865122 + RMER13B LTR ERVK 1 908 0 5 702 2958 287 49 61 chr13 15419560 15420421 -104863891 + Lx5 LINE L1 5753 6610 -440 5 702 3415 35 2 0 chr13 15420421 15420816 -104863496 + MTA_Mm LTR MaLR 1 396 0 5 702 2958 287 49 61 chr13 15420816 15421249 -104863063 + Lx5 LINE L1 6611 7031 -19 5 702 500 181 394 0 chr13 15421327 15421487 -104862825 + URR1B DNA MER1_type 3 225 0 5 702 696 264 22 27 chr13 15421489 15421672 -104862640 + B3A SINE B2 17 198 0 5 702 249 98 0 0 chr13 15421729 15421770 -104862542 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 702 189 107 0 0 chr13 15421770 15421798 -104862514 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 702 766 239 14 5 chr13 15421826 15421997 -104862315 + B3A SINE B2 1 168 -48 5 702 782 230 91 0 chr13 15423411 15423598 -104860714 + B3 SINE B2 4 207 -9 5 702 340 181 147 11 chr13 15423620 15423715 -104860597 - MER5A1 DNA MER1_type -34 132 25 5 702 25 0 0 0 chr13 15424501 15424526 -104859786 + AT_rich Low_complexity Low_complexity 1 25 0 5 702 309 357 53 12 chr13 15425085 15425255 -104859057 - MER3 DNA MER1_type -17 192 16 5 702 18182 157 17 67 chr13 15425581 15427654 -104856658 - Lx LINE L1 -7 6647 4564 5 702 1720 123 16 59 chr13 15427654 15427975 -104856337 - RLTRETN_Mm LTR ERVK -5 317 11 5 702 18182 157 17 67 chr13 15427975 15429637 -104854675 - Lx LINE L1 -7 4563 2892 5 702 1099 91 14 166 chr13 15429637 15429860 -104854452 - B2_Mm2 SINE B2 -5 190 2 5 702 18182 166 18 88 chr13 15429860 15430914 -104853398 - Lx LINE L1 -2992 2891 1831 5 702 579 170 0 0 chr13 15430898 15431004 -104853308 - L1VL2 LINE L1 -5998 337 232 5 702 197 297 108 85 chr13 15431122 15431251 -104853061 - L2c LINE L2 -9 3378 3247 5 702 944 198 10 76 chr13 15431391 15431493 -104852819 + B3 SINE B2 28 127 -89 5 702 1180 56 0 0 chr13 15431493 15431636 -104852676 + B1_Mus2 SINE Alu 3 145 -2 5 702 423 0 0 0 chr13 15431636 15431683 -104852629 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 702 944 198 10 76 chr13 15431683 15431776 -104852536 + B3 SINE B2 128 210 -6 5 702 296 290 53 21 chr13 15431815 15431910 -104852402 + PB1D10 SINE Alu 14 111 -6 5 702 241 296 25 0 chr13 15431916 15431997 -104852315 + GA-rich Low_complexity Low_complexity 2 84 0 5 702 1380 56 0 0 chr13 15433608 15433786 -104850526 + (CA)n Simple_repeat Simple_repeat 2 179 0 5 702 490 191 8 8 chr13 15433908 15434040 -104850272 + GA-rich Low_complexity Low_complexity 1 132 0 5 702 445 269 67 0 chr13 15434213 15434347 -104849965 + B1_Mur1 SINE Alu 2 144 -5 5 702 186 237 228 38 chr13 15434398 15434477 -104849835 + L2 LINE L2 2815 2908 -511 5 702 777 122 0 0 chr13 15435190 15435346 -104848966 + (CA)n Simple_repeat Simple_repeat 2 157 0 5 702 189 0 0 0 chr13 15435346 15435366 -104848946 + (TC)n Simple_repeat Simple_repeat 1 21 0 5 702 266 68 45 0 chr13 15436669 15436713 -104847599 + (CAGAGA)n Simple_repeat Simple_repeat 2 47 0 5 702 210 91 0 0 chr13 15439335 15439368 -104844944 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 5 702 2772 44 0 6 chr13 15439712 15440056 -104844256 - L1Md_F3 LINE L1 -14 6570 6229 5 702 872 120 0 0 chr13 15441571 15441704 -104842608 + L1_Mm LINE L1 4805 4937 -946 5 702 780 64 0 0 chr13 15441713 15441822 -104842490 - L1_Mus1 LINE L1 -3 6564 6456 5 702 2299 149 1 120 chr13 15441823 15442467 -104841845 - L1Md_F LINE L1 -4487 1396 852 5 702 3384 25 5 2 chr13 15442467 15442862 -104841450 - MTA_Mm LTR MaLR 0 396 1 5 702 2299 229 70 124 chr13 15442862 15443432 -104840880 - L1Md_F LINE L1 -5768 870 261 5 702 198 167 0 0 chr13 15443460 15443496 -104840816 + T-rich Low_complexity Low_complexity 1 36 0 5 702 1154 58 0 0 chr13 15443499 15443638 -104840674 - B1_Mm SINE Alu -7 140 2 5 702 6715 144 12 18 chr13 15443640 15445380 -104838932 + Lx LINE L1 4925 6654 0 5 702 552 15 0 0 chr13 15445655 15445720 -104838592 + (TTTC)n Simple_repeat Simple_repeat 2 66 0 5 702 513 84 0 0 chr13 15446161 15446232 -104838080 + (GGA)n Simple_repeat Simple_repeat 2 72 0 5 702 396 0 0 0 chr13 15446613 15446657 -104837655 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 5 702 485 173 0 0 chr13 15447078 15447153 -104837159 + B3 SINE B2 28 102 -114 5 702 567 0 0 0 chr13 15447162 15447225 -104837087 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 5 702 284 253 92 0 chr13 15449477 15449564 -104834748 + MLT1B LTR MaLR 1 95 -372 5 702 3992 136 17 0 chr13 15449586 15450224 -104834088 - L1_Mur2 LINE L1 -1516 4361 3713 5 702 9123 100 13 10 chr13 15450227 15451466 -104832846 + Lx2 LINE L1 5754 6996 -1 5 702 492 283 133 0 chr13 15451474 15451654 -104832658 + MLT1B LTR MaLR 113 316 -74 5 702 1191 217 5 0 chr13 15452511 15452718 -104831594 + B3 SINE B2 2 209 -7 5 702 735 249 24 90 chr13 15453149 15453361 -104830951 - B3A SINE B2 0 198 1 5 702 815 94 29 17 chr13 15453642 15453815 -104830497 + (TAGA)n Simple_repeat Simple_repeat 2 176 0 5 702 538 26 13 13 chr13 15453827 15453904 -104830408 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 5 702 236 218 282 53 chr13 15453914 15454045 -104830267 - MIRb SINE MIR -40 228 68 5 702 3482 194 50 6 chr13 15454524 15455230 -104829082 - Lx9 LINE L1 -1 7643 6907 5 702 1312 311 86 24 chr13 15455276 15456102 -104828210 + L1MB8 LINE L1 5277 6153 -25 5 702 2451 248 73 70 chr13 15456109 15456353 -104827959 + L1MC LINE L1 3923 4179 -1967 5 702 554 235 174 0 chr13 15456353 15456468 -104827844 + B1_Mur4 SINE Alu 1 135 -15 5 702 2451 248 73 70 chr13 15456468 15457240 -104827072 + L1MC LINE L1 4180 4942 -1204 5 702 1128 274 49 19 chr13 15457256 15457684 -104826628 + L1MA7 LINE L1 5718 6158 -133 5 702 268 64 21 21 chr13 15457715 15457763 -104826549 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 5 702 227 160 0 0 chr13 15457849 15457899 -104826413 + L1MA8 LINE L1 6242 6291 0 5 702 832 247 48 34 chr13 15457895 15458188 -104826124 + L1MC LINE L1 4942 5238 -908 5 702 724 84 7 40 chr13 15459889 15460037 -104824275 + (CCCTAA)n Simple_repeat Simple_repeat 3 145 0 5 702 1582 196 83 56 chr13 15460403 15460777 -104823535 + ORR1C2 LTR MaLR 1 384 0 5 702 2077 142 34 28 chr13 15460853 15461207 -104823105 - Lx3B LINE L1 0 6973 6618 5 702 394 190 49 20 chr13 15461551 15461653 -104822659 - RLTR14-int LTR ERV1 -4747 570 466 5 702 697 312 97 62 chr13 15461787 15462221 -104822091 - RLTR14-int LTR ERV1 -4867 450 2 5 702 483 284 25 31 chr13 15462221 15462381 -104821931 - RLTR14 LTR ERV1 0 382 224 5 702 532 224 24 16 chr13 15464599 15464726 -104819586 + B3 SINE B2 6 133 -83 5 702 2491 188 48 10 chr13 15464735 15465344 -104818968 - Lx9 LINE L1 -1 7643 6985 5 702 455 173 0 47 chr13 15465346 15465431 -104818881 + B3 SINE B2 129 209 -7 5 702 2654 196 28 37 chr13 15465738 15466309 -104818003 - RLTR20B3 LTR ERVK -11 566 1 5 703 372 355 149 9 chr13 15466676 15466992 -104817320 + L1MEg LINE L1 1001 1360 -4724 5 703 21 36 0 0 chr13 15467768 15467796 -104816516 + AT_rich Low_complexity Low_complexity 1 28 0 5 703 622 294 76 15 chr13 15467913 15468110 -104816202 + B3 SINE B2 2 210 -6 5 703 408 333 45 8 chr13 15468138 15468271 -104816041 + B1F SINE Alu 1 138 -11 5 703 1616 295 118 64 chr13 15468373 15469099 -104815213 + L1_Mur3 LINE L1 1600 2418 -3462 5 703 403 87 29 0 chr13 15469099 15469168 -104815144 + (TA)n Simple_repeat Simple_repeat 2 72 0 5 703 1616 295 118 64 chr13 15469168 15469202 -104815110 + L1_Mur3 LINE L1 2419 2421 -3459 5 703 360 0 0 0 chr13 15469202 15469242 -104815070 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 5 703 1616 295 118 64 chr13 15469242 15469770 -104814542 + L1_Mur3 LINE L1 2422 2959 -2921 5 703 1224 143 212 4 chr13 15469910 15470155 -104814157 + RLTR11A LTR ERVK 1 296 -232 5 703 1019 279 75 44 chr13 15470169 15470689 -104813623 - L1_Mur3 LINE L1 -449 5431 4909 5 703 2276 265 48 22 chr13 15470993 15471762 -104812550 - L1_Mur3 LINE L1 -1693 4187 3399 5 703 1599 236 78 91 chr13 15471767 15472317 -104811995 + RLTR26 LTR ERVK 96 638 -4 5 703 470 222 92 19 chr13 15472374 15472530 -104811782 - L1_Mur3 LINE L1 -2797 3343 3196 5 703 267 286 13 0 chr13 15473034 15473111 -104811201 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 703 474 355 0 7 chr13 15473130 15473272 -104811040 - RSINE1 SINE B4 -21 144 4 5 703 23 0 0 0 chr13 15473348 15473371 -104810941 + AT_rich Low_complexity Low_complexity 1 23 0 5 703 21 0 0 31 chr13 15473403 15473417 -104810895 + AT_rich Low_complexity Low_complexity 1 14 0 5 703 1291 89 50 0 chr13 15473417 15473597 -104810715 - B2_Mm2 SINE B2 -6 189 1 5 703 21 0 0 31 chr13 15473597 15473614 -104810698 + AT_rich Low_complexity Low_complexity 1 17 0 5 703 38 22 0 0 chr13 15473730 15473775 -104810537 + AT_rich Low_complexity Low_complexity 1 45 0 5 703 530 171 24 64 chr13 15474000 15474125 -104810187 - RLTR44A LTR ERVK 0 405 286 5 703 351 0 0 0 chr13 15474126 15474165 -104810147 + (TTA)n Simple_repeat Simple_repeat 1 39 0 6 703 488 0 0 0 chr13 15474165 15474226 -104810086 - L1Md_F3 LINE L1 -26 6558 6498 6 703 237 211 0 0 chr13 15474229 15474281 -104810031 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 703 395 289 20 66 chr13 15474550 15474702 -104809610 + Lx8 LINE L1 6593 6737 -736 6 703 1517 289 52 37 chr13 15474715 15475499 -104808813 - L1MA4 LINE L1 -370 5930 5100 6 703 936 292 86 68 chr13 15475587 15476207 -104808105 - RMER13A LTR ERVK -211 697 34 6 703 524 277 100 32 chr13 15476242 15476492 -104807820 - L1MA4 LINE L1 -1030 5113 4847 6 703 2735 255 64 65 chr13 15476555 15477070 -104807242 + L1_Mur3 LINE L1 1016 1509 -4371 6 703 4000 32 5 0 chr13 15477070 15477504 -104806808 + RLTR10C LTR ERVK 1 436 0 6 703 2735 239 81 63 chr13 15477504 15478097 -104806215 + L1_Mur3 LINE L1 1510 2147 -3733 6 703 1302 34 7 0 chr13 15478097 15478243 -104806069 + B1_Mm SINE Alu 1 147 0 6 703 2735 239 81 63 chr13 15478243 15478340 -104805972 + L1_Mur3 LINE L1 2148 2247 -3633 6 703 899 156 7 0 chr13 15478343 15478497 -104805815 - URR1B DNA MER1_type 0 225 71 6 703 741 176 7 0 chr13 15478504 15478652 -104805660 + L1_Mur3 LINE L1 2247 2395 -3485 6 703 398 381 56 8 chr13 15478653 15479008 -104805304 + L1M2 LINE L1 2136 2507 -3636 6 703 1128 294 180 9 chr13 15479035 15479602 -104804710 + L1_Mur3 LINE L1 3654 4317 -1563 6 703 273 252 129 9 chr13 15479600 15479716 -104804596 + L1MC LINE L1 3621 3750 -2396 6 703 31 58 0 0 chr13 15479985 15480037 -104804275 + AT_rich Low_complexity Low_complexity 1 52 0 6 703 244 280 140 45 chr13 15480242 15480399 -104803913 - L1M5 LINE L1 -373 5789 5618 6 703 1022 129 0 12 chr13 15480441 15480614 -104803698 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 6 703 745 107 16 0 chr13 15480626 15480748 -104803564 + (TC)n Simple_repeat Simple_repeat 1 124 0 6 703 678 214 35 7 chr13 15480762 15480903 -104803409 - B1_Mur4 SINE Alu 0 150 6 6 703 414 0 0 0 chr13 15481389 15481435 -104802877 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 6 703 213 340 131 76 chr13 15482423 15482767 -104801545 - L2b LINE L2 -79 3308 2946 6 703 465 263 44 0 chr13 15483058 15483172 -104801140 + MER20 DNA MER1_type 98 216 -3 6 703 723 281 45 100 chr13 15483592 15483991 -104800321 + MTEa LTR MaLR 1 377 -2 6 703 404 304 9 0 chr13 15484014 15484129 -104800183 - PB1D10 SINE Alu -1 116 1 6 703 597 85 390 0 chr13 15484588 15484706 -104799606 + ORR1A3 LTR MaLR 161 324 -2 6 703 895 101 107 7 chr13 15484704 15484854 -104799458 + ORR1A3-int LTR MaLR 1 165 -1798 6 703 1263 90 3 5 chr13 15484816 15485011 -104799301 - ORR1A2 LTR MaLR -137 192 1 6 703 896 261 35 24 chr13 15485011 15485349 -104798963 + L1M4 LINE L1 4961 5302 -844 6 703 1163 261 82 75 chr13 15485455 15485831 -104798481 + MTE2b LTR MaLR 1 379 0 6 703 25 0 0 0 chr13 15486099 15486124 -104798188 + AT_rich Low_complexity Low_complexity 1 25 0 6 703 226 325 0 24 chr13 15486183 15486268 -104798044 - L2c LINE L2 -261 3126 3044 6 703 793 284 56 80 chr13 15487874 15488338 -104795974 - L1M5 LINE L1 -430 5749 5298 6 703 438 20 0 0 chr13 15488338 15488389 -104795923 + (TTTC)n Simple_repeat Simple_repeat 4 54 0 6 703 793 284 56 80 chr13 15488389 15488426 -104795886 - L1M5 LINE L1 -882 5297 5261 6 703 3435 38 38 0 chr13 15489109 15489505 -104794807 + RLTR10A LTR ERVK 1 411 0 6 703 1576 212 53 104 chr13 15489926 15490169 -104794143 - RLTR41 LTR ERV1 0 446 208 6 703 3284 53 55 41 chr13 15490169 15490605 -104793707 + L1_Mus1 LINE L1 6126 6567 0 6 703 1576 174 42 37 chr13 15490605 15490871 -104793441 - RLTR41 LTR ERV1 -239 207 1 6 703 1085 313 68 32 chr13 15490958 15491591 -104792721 - RLTR6-int LTR ERV1 -61 7717 7062 6 703 265 299 0 22 chr13 15492040 15492129 -104792183 - RLTR6-int LTR ERV1 -1269 6287 6201 6 703 278 282 12 0 chr13 15492638 15492723 -104791589 - RLTR6-int LTR ERV1 -1689 5763 5678 6 703 4159 329 56 62 chr13 15493190 15494228 -104790084 - RLTR6-int LTR ERV1 -2369 5409 4447 6 703 297 0 0 0 chr13 15494228 15494261 -104790051 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 703 1062 104 0 0 chr13 15494262 15494396 -104789916 - B1_Mus1 SINE Alu -12 136 3 6 703 4159 329 56 62 chr13 15494396 15496969 -104787343 - RLTR6-int LTR ERV1 -3332 4446 1817 6 703 497 277 85 85 chr13 15496953 15497355 -104786957 - RLTR6-int LTR ERV1 -6140 1416 1015 6 703 266 305 34 34 chr13 15497647 15497824 -104786488 - RLTR6-int LTR ERV1 -6855 701 475 6 703 225 0 0 0 chr13 15498160 15498185 -104786127 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 6 703 2239 150 53 180 chr13 15498268 15498779 -104785533 - RLTR41 LTR ERV1 0 446 1 6 703 270 95 0 0 chr13 15499071 15499113 -104785199 + (TTG)n Simple_repeat Simple_repeat 2 43 0 6 703 1244 263 100 26 chr13 15499404 15499781 -104784531 + MTD LTR MaLR 1 406 -13 6 703 480 18 0 0 chr13 15499781 15499838 -104784474 + (GA)n Simple_repeat Simple_repeat 1 57 0 6 703 1244 263 100 26 chr13 15499838 15499850 -104784462 + MTD LTR MaLR 407 418 -1 6 703 251 288 14 0 chr13 15499916 15499989 -104784323 + MTC-int LTR MaLR 56 129 -1129 6 703 1528 246 19 22 chr13 15500000 15500415 -104783897 + MTC-int LTR MaLR 146 559 -699 1 703 1198 227 52 25 chr13 15500441 15500766 -104783546 + MTC-int LTR MaLR 733 1066 -192 1 703 473 179 0 0 chr13 15500769 15500847 -104783465 - B1_Mur2 SINE Alu -1 148 71 2 703 22 0 0 0 chr13 15500909 15500931 -104783381 + AT_rich Low_complexity Low_complexity 1 22 0 3 703 707 224 47 12 chr13 15501059 15501148 -104783164 - MTD LTR MaLR -21 398 309 4 703 2485 122 26 14 chr13 15501148 15501564 -104782748 - BGLII LTR ERVK 0 421 1 5 703 707 224 47 12 chr13 15501564 15501646 -104782666 - MTD LTR MaLR -111 308 222 4 703 474 179 91 36 chr13 15501621 15501731 -104782581 - MTD LTR MaLR -303 116 1 4 703 229 104 12 49 chr13 15504252 15504333 -104779979 + (TTTG)n Simple_repeat Simple_repeat 2 79 0 6 703 837 245 15 5 chr13 15504335 15504540 -104779772 + B3 SINE B2 3 209 -7 7 703 271 279 0 0 chr13 15504632 15504700 -104779612 + MER5A DNA MER1_type 121 188 -1 8 703 540 257 30 56 chr13 15505581 15505786 -104778526 + MTEa LTR MaLR 176 379 0 9 703 821 240 77 120 chr13 15506225 15506642 -104777670 - L1MD2 LINE L1 -424 5935 5537 1 703 480 259 76 50 chr13 15506648 15506925 -104777387 - L1M6 LINE L1 -4687 1809 1526 1 703 315 244 24 75 chr13 15507443 15507562 -104776750 - L1MB5 LINE L1 -2 6172 6066 1 703 1706 109 4 0 chr13 15507562 15507801 -104776511 + L1_Mus2 LINE L1 6323 6562 -4 1 703 297 270 147 50 chr13 15507801 15507959 -104776353 - L1MB5 LINE L1 -119 6065 5880 1 703 46 0 0 0 chr13 15507972 15508018 -104776294 + AT_rich Low_complexity Low_complexity 1 46 0 1 703 449 315 73 29 chr13 15508198 15508443 -104775869 - Tigger7 DNA MER2_type -2079 412 157 1 703 401 292 76 0 chr13 15508494 15508638 -104775674 - L1MC1 LINE L1 -117 6216 6062 1 703 764 199 7 20 chr13 15508727 15508876 -104775436 - B1_Mur1 SINE Alu -1 148 2 1 703 345 100 0 0 chr13 15509162 15509212 -104775100 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 703 23 54 0 0 chr13 15509633 15509670 -104774642 + AT_rich Low_complexity Low_complexity 1 37 0 1 703 303 280 163 41 chr13 15511255 15511501 -104772811 + Tigger15a DNA TcMar 325 600 -115 2 703 759 313 83 10 chr13 15511800 15512184 -104772128 + Charlie20a DNA Charlie 186 597 -210 2 703 478 328 47 5 chr13 15512215 15512405 -104771907 - B3A SINE B2 0 198 1 2 703 711 223 48 38 chr13 15512640 15512850 -104771462 - B3 SINE B2 0 216 5 2 703 21 0 0 0 chr13 15512928 15512949 -104771363 + AT_rich Low_complexity Low_complexity 1 21 0 2 703 189 0 0 0 chr13 15512972 15512993 -104771319 + (T)n Simple_repeat Simple_repeat 1 21 0 2 703 298 351 6 38 chr13 15514170 15514330 -104769982 + RSINE1 SINE B4 2 156 -9 2 703 210 224 0 0 chr13 15514352 15514401 -104769911 + (TAA)n Simple_repeat Simple_repeat 1 49 0 2 703 273 146 0 0 chr13 15516391 15516439 -104767873 + (T)n Simple_repeat Simple_repeat 1 48 0 2 703 712 189 23 0 chr13 15516439 15516585 -104767727 - B1_Mur4 SINE Alu 0 150 1 2 703 26 50 0 0 chr13 15516670 15516710 -104767602 + AT_rich Low_complexity Low_complexity 1 40 0 3 703 1121 229 141 9 chr13 15516926 15517252 -104767060 + ORR1D1 LTR MaLR 1 369 -5 3 703 357 301 9 17 chr13 15517270 15517385 -104766927 + (TATG)n Simple_repeat Simple_repeat 1 114 0 3 703 465 391 23 15 chr13 15517416 15517676 -104766636 - Lx8 LINE L1 -178 7295 7034 3 703 539 339 35 16 chr13 15517681 15517936 -104766376 - Lx8 LINE L1 -995 6478 6219 3 703 234 81 0 0 chr13 15518811 15518848 -104765464 + (A)n Simple_repeat Simple_repeat 1 37 0 3 703 684 111 0 0 chr13 15519504 15519612 -104764700 + (CA)n Simple_repeat Simple_repeat 2 109 0 3 703 2739 126 0 2 chr13 15519614 15520035 -104764277 - RLTR20A2 LTR ERVK -158 420 1 3 703 357 43 0 0 chr13 15520127 15520174 -104764138 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 703 972 180 0 11 chr13 15520178 15520352 -104763960 + B2_Mm2 SINE B2 1 172 -23 3 703 306 0 0 0 chr13 15520354 15520388 -104763924 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 703 225 0 0 0 chr13 15520388 15520412 -104763900 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 703 585 0 0 0 chr13 15520567 15520632 -104763680 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 4 703 500 315 8 0 chr13 15520924 15521054 -104763258 + RSINE1 SINE B4 6 136 -29 4 703 417 70 0 0 chr13 15521071 15521128 -104763184 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 703 745 277 66 62 chr13 15521141 15521524 -104762788 + RLTR26 LTR ERVK 5 417 -225 4 703 347 60 60 0 chr13 15521717 15521784 -104762528 + (TG)n Simple_repeat Simple_repeat 1 71 0 4 703 441 165 48 10 chr13 15521952 15522056 -104762256 + Lx9 LINE L1 7338 7445 -199 4 703 4849 186 42 49 chr13 15522058 15523091 -104761221 - Lx5 LINE L1 -160 6890 5866 4 703 311 238 168 0 chr13 15523156 15523257 -104761055 + PB1D7 SINE Alu 3 120 0 4 703 2105 123 41 41 chr13 15523300 15523665 -104760647 + IAPLTR1_Mm LTR ERVK 1 365 -2 4 703 57909 17 7 10 chr13 15523665 15530159 -104754153 + IAPEz-int LTR ERVK 6 6481 0 4 703 2105 123 41 41 chr13 15530159 15530524 -104753788 + IAPLTR1_Mm LTR ERVK 1 365 -2 4 703 516 105 0 0 chr13 15530761 15530837 -104753475 + (GGA)n Simple_repeat Simple_repeat 1 76 0 5 703 338 264 22 11 chr13 15530871 15530963 -104753349 + PB1D9 SINE Alu 28 120 0 5 703 374 219 0 0 chr13 15531200 15531264 -104753048 - PB1D10 SINE Alu -28 89 26 5 703 951 132 0 17 chr13 15531396 15531573 -104752739 + (GAA)n Simple_repeat Simple_repeat 2 175 0 5 703 634 207 373 35 chr13 15532036 15532296 -104752016 - Lx5 LINE L1 0 7050 6703 5 703 460 290 154 13 chr13 15532706 15533013 -104751299 - MLT1A LTR MaLR -7 367 4 5 703 505 300 230 83 chr13 15533182 15533844 -104750468 + MLT-int LTR MaLR 332 1090 -645 5 703 520 333 15 5 chr13 15534549 15534745 -104749567 + Lx9 LINE L1 7251 7448 -196 5 703 1163 75 0 13 chr13 15535502 15535651 -104748661 + B1_Mus1 SINE Alu 2 148 0 5 703 187 54 0 51 chr13 15535653 15535692 -104748620 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 5 703 213 174 0 61 chr13 15536150 15536199 -104748113 - MIR SINE MIR -204 58 13 6 703 625 224 39 34 chr13 15536753 15536941 -104747371 + B3 SINE B2 9 188 -7 6 703 648 276 46 5 chr13 15536972 15537169 -104747143 + B3 SINE B2 1 205 -11 6 703 330 132 0 0 chr13 15537290 15537343 -104746969 + (T)n Simple_repeat Simple_repeat 1 53 0 6 703 1140 244 138 14 chr13 15537501 15537871 -104746441 - MTD LTR MaLR -3 416 1 6 703 447 282 59 44 chr13 15539031 15539235 -104745077 + MER58B DNA MER1_type 67 273 -68 6 703 752 88 18 0 chr13 15539426 15539539 -104744773 + (TATATG)n Simple_repeat Simple_repeat 4 118 0 6 703 192 354 26 9 chr13 15539998 15540112 -104744200 + MIR3 SINE MIR 92 207 -1 6 703 374 331 38 19 chr13 15541603 15541763 -104742549 + MER5A1 DNA MER1_type 1 163 -3 6 703 189 0 0 0 chr13 15541920 15541941 -104742371 + (A)n Simple_repeat Simple_repeat 1 21 0 6 703 4011 68 23 4 chr13 15542333 15542862 -104741450 - Lx3_Mus LINE L1 -28 6981 6443 7 703 1047 175 4 113 chr13 15543368 15543547 -104740765 + B3 SINE B2 1 166 -50 7 703 612 27 0 0 chr13 15543547 15543621 -104740691 + (CA)n Simple_repeat Simple_repeat 2 75 0 7 703 1047 175 4 113 chr13 15543621 15543679 -104740633 + B3 SINE B2 167 212 -4 7 703 195 42 0 0 chr13 15544084 15544108 -104740204 + (T)n Simple_repeat Simple_repeat 1 24 0 7 703 333 0 0 0 chr13 15545431 15545468 -104738844 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 703 1519 271 80 36 chr13 15545752 15546446 -104737866 + Lx8 LINE L1 5269 6034 -1439 7 703 225 0 0 0 chr13 15546553 15546578 -104737734 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 7 703 2593 324 56 72 chr13 15546738 15547005 -104737307 + Lx8 LINE L1 6097 6339 -1134 7 703 383 229 154 62 chr13 15547005 15547135 -104737177 - B1_Mur1 SINE Alu -7 142 1 7 703 2593 324 56 72 chr13 15547135 15548264 -104736048 + Lx8 LINE L1 6340 7471 -2 7 703 320 302 8 40 chr13 15549769 15549893 -104734419 + LTR85a LTR Gypsy? 583 702 0 7 703 334 248 55 89 chr13 15550898 15551010 -104733302 + B4A SINE B4 111 217 -75 7 703 404 0 39 0 chr13 15551010 15551061 -104733251 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 8 703 334 248 55 89 chr13 15551061 15551094 -104733218 + B4A SINE B4 218 250 -42 7 703 258 299 8 107 chr13 15551205 15551336 -104732976 + MLT1K LTR MaLR 462 579 -16 8 703 571 254 84 25 chr13 15551595 15551785 -104732527 + B3A SINE B2 10 214 -2 8 703 382 313 46 0 chr13 15552157 15552288 -104732024 + MLT1C LTR MaLR 6 142 -325 8 703 343 340 63 31 chr13 15552320 15552575 -104731737 + MLT1C LTR MaLR 203 465 -2 8 703 1789 191 93 3 chr13 15552649 15553026 -104731286 - MTD LTR MaLR -8 411 1 8 703 22 0 0 0 chr13 15555003 15555025 -104729287 + GC_rich Low_complexity Low_complexity 1 22 0 8 703 22 56 0 0 chr13 15555183 15555219 -104729093 + GC_rich Low_complexity Low_complexity 1 36 0 8 703 270 0 0 0 chr13 15555287 15555317 -104728995 + (CGG)n Simple_repeat Simple_repeat 3 32 0 8 703 182 192 19 0 chr13 15555755 15555807 -104728505 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 8 703 191 36 36 0 chr13 15556407 15556435 -104727877 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 8 703 837 56 0 0 chr13 15557251 15557358 -104726954 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 9 703 23 0 0 0 chr13 15557661 15557684 -104726628 + AT_rich Low_complexity Low_complexity 1 23 0 9 703 726 50 0 0 chr13 15559878 15559977 -104724335 + (TG)n Simple_repeat Simple_repeat 2 100 0 9 703 21 0 0 0 chr13 15560859 15560880 -104723432 + AT_rich Low_complexity Low_complexity 1 21 0 9 703 636 239 7 14 chr13 15561603 15561743 -104722569 + B1F SINE Alu 2 140 -9 9 703 22 0 0 0 chr13 15562326 15562348 -104721964 + AT_rich Low_complexity Low_complexity 1 22 0 9 703 189 0 0 0 chr13 15563585 15563606 -104720706 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 9 703 5176 65 19 10 chr13 15563920 15564600 -104719712 + L1Md_F2 LINE L1 5897 6582 0 9 703 459 0 0 0 chr13 15564861 15564912 -104719400 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 703 275 150 0 16 chr13 15565897 15565958 -104718354 + GA-rich Low_complexity Low_complexity 2 61 0 9 703 609 172 36 43 chr13 15567573 15567713 -104716599 - B1_Mur1 SINE Alu 0 149 11 1 703 259 258 0 29 chr13 15567770 15567838 -104716474 + PB1D10 SINE Alu 43 108 -9 1 703 495 0 0 0 chr13 15567865 15567920 -104716392 + (TATG)n Simple_repeat Simple_repeat 4 58 0 1 703 296 253 127 0 chr13 15567938 15568017 -104716295 - RSINE1 SINE B4 -33 132 44 1 703 419 236 23 57 chr13 15569374 15569393 -104714919 - CYRA11_Mm Unknown Y-chromosome -295 322 244 1 703 889 82 0 15 chr13 15569393 15569530 -104714782 + URR1B DNA MER1_type 91 225 0 1 703 419 236 23 57 chr13 15569530 15569549 -104714763 - CYRA11_Mm Unknown Y-chromosome -295 243 154 1 703 336 232 35 35 chr13 15571912 15571997 -104712315 + B1F1 SINE Alu 13 97 -52 1 703 721 209 8 0 chr13 15573510 15573644 -104710668 + B1_Mur1 SINE Alu 8 142 -7 1 703 209 314 80 22 chr13 15574177 15574314 -104709998 + MIRb SINE MIR 31 175 -93 1 703 425 235 10 0 chr13 15574322 15574424 -104709888 - RSINE1 SINE B4 -61 104 2 1 703 345 208 409 0 chr13 15575497 15575646 -104708666 - L1MC2 LINE L1 -9 6335 6126 1 703 420 213 73 9 chr13 15575741 15575850 -104708462 - L1MC2 LINE L1 -243 6101 5986 1 703 21 0 0 0 chr13 15577262 15577283 -104707029 + AT_rich Low_complexity Low_complexity 1 21 0 1 703 206 338 0 12 chr13 15577718 15577799 -104706513 + CT-rich Low_complexity Low_complexity 1 80 0 1 703 298 39 59 0 chr13 15580312 15580363 -104703949 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 703 926 211 56 10 chr13 15580841 15581037 -104703275 + B3 SINE B2 1 205 -11 1 703 303 28 0 0 chr13 15581040 15581076 -104703236 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1 703 22 56 0 0 chr13 15581650 15581686 -104702626 + AT_rich Low_complexity Low_complexity 1 36 0 1 703 414 259 0 0 chr13 15581709 15581879 -104702433 + (TG)n Simple_repeat Simple_repeat 2 171 0 1 703 588 272 59 11 chr13 15581882 15582068 -104702244 - B3A SINE B2 -2 196 2 1 703 2036 45 0 8 chr13 15583995 15584241 -104700071 - L1_Mus1 LINE L1 0 6567 6324 1 703 399 253 104 17 chr13 15584819 15584992 -104699320 - L1M5 LINE L1 -646 5518 5331 1 703 211 114 45 0 chr13 15584994 15585038 -104699274 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 1 703 229 268 58 11 chr13 15587369 15587456 -104696856 + L1M2 LINE L1 5659 5749 -542 1 703 586 259 72 25 chr13 15589002 15589190 -104695122 - B3A SINE B2 -14 202 3 1 703 453 50 0 0 chr13 15589890 15589950 -104694362 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 703 396 40 0 0 chr13 15589950 15590000 -104694312 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 703 407 168 267 0 chr13 15590003 15590104 -104694208 - B1_Mur1 SINE Alu -20 129 2 1 703 207 88 0 0 chr13 15590541 15590575 -104693737 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 703 28 48 0 0 chr13 15590800 15590842 -104693470 + AT_rich Low_complexity Low_complexity 1 42 0 1 703 1091 124 6 0 chr13 15591246 15591423 -104692889 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 1 703 1096 260 124 25 chr13 15591463 15591940 -104692372 - Lx9 LINE L1 -8 7636 6981 1 703 483 309 42 38 chr13 15594821 15594944 -104689368 - B4A SINE B4 -77 215 95 1 703 966 220 5 27 chr13 15594944 15595164 -104689148 - B3 SINE B2 0 216 2 1 703 483 309 42 38 chr13 15595164 15595252 -104689060 - B4A SINE B4 -198 94 3 1 703 295 121 17 17 chr13 15595343 15595402 -104688910 + CT-rich Low_complexity Low_complexity 2 60 0 1 703 22 0 0 0 chr13 15595521 15595543 -104688769 + AT_rich Low_complexity Low_complexity 1 22 0 1 703 819 190 197 53 chr13 15595578 15595862 -104688450 - MTD LTR MaLR -4 415 91 1 703 663 203 22 0 chr13 15595880 15596018 -104688294 - B3 SINE B2 -33 183 43 1 703 414 0 0 0 chr13 15596276 15596322 -104687990 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 704 276 53 0 0 chr13 15598543 15598581 -104685731 + (T)n Simple_repeat Simple_repeat 1 38 0 1 704 22 56 0 0 chr13 15599956 15599992 -104684320 + AT_rich Low_complexity Low_complexity 1 36 0 1 704 1189 274 125 43 chr13 15600020 15600604 -104683708 - L1MC1 LINE L1 -7 6326 5695 1 704 373 311 45 0 chr13 15601155 15601287 -104683025 - B1F1 SINE Alu -10 139 2 1 704 349 244 11 0 chr13 15601343 15601433 -104682879 - MLT1C LTR MaLR -315 152 62 1 704 262 245 141 50 chr13 15601550 15601649 -104682663 + PB1D10 SINE Alu 1 108 -9 1 704 1266 90 0 0 chr13 15602303 15602481 -104681831 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 704 252 0 0 0 chr13 15602556 15602584 -104681728 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 704 441 0 0 0 chr13 15603103 15603152 -104681160 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 704 183 42 0 0 chr13 15603390 15603414 -104680898 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 704 290 296 88 7 chr13 15603676 15603812 -104680500 - LTR16A LTR ERVL -4 447 301 1 704 481 308 64 23 chr13 15606325 15606498 -104677814 + MER58A DNA MER1_type 2 181 -43 1 704 183 80 0 0 chr13 15606616 15606641 -104677671 + (TCCC)n Simple_repeat Simple_repeat 4 28 0 1 704 204 313 82 65 chr13 15606750 15607044 -104677268 + L2 LINE L2 1439 1737 -1682 1 704 1017 94 0 27 chr13 15607199 15607384 -104676928 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 704 352 303 10 0 chr13 15608000 15608099 -104676213 - PB1 SINE Alu -27 100 1 1 704 216 158 0 0 chr13 15608160 15608198 -104676114 + CT-rich Low_complexity Low_complexity 3 40 0 1 704 717 23 0 0 chr13 15609569 15609656 -104674656 + (TG)n Simple_repeat Simple_repeat 1 87 0 1 704 466 330 80 15 chr13 15609677 15609951 -104674361 - B4A SINE B4 0 292 1 1 704 25 65 0 0 chr13 15610407 15610453 -104673859 + AT_rich Low_complexity Low_complexity 1 46 0 1 704 273 57 0 0 chr13 15613205 15613240 -104671072 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 704 1257 245 116 11 chr13 15614569 15614948 -104669364 - MTD LTR MaLR 0 419 1 1 704 805 233 64 0 chr13 15616538 15616740 -104667572 - ID_B1 SINE B4 -7 217 3 1 704 332 310 46 15 chr13 15617177 15617308 -104667004 + B1F1 SINE Alu 6 140 -9 1 704 401 271 42 0 chr13 15617645 15617789 -104666523 - L1ME3A LINE L1 -335 5838 5689 1 704 22 0 0 0 chr13 15618280 15618302 -104666010 + AT_rich Low_complexity Low_complexity 1 22 0 1 704 21 36 0 0 chr13 15620512 15620540 -104663772 + AT_rich Low_complexity Low_complexity 1 28 0 1 704 5770 150 4 22 chr13 15620618 15621633 -104662679 - L1_Mur2 LINE L1 -669 5208 4212 1 704 7519 98 22 8 chr13 15621630 15623031 -104661281 + Lx LINE L1 5234 6654 0 1 704 1018 178 73 50 chr13 15624277 15624496 -104659816 + URR1A DNA MER1_type 3 226 0 1 704 1319 52 81 0 chr13 15624498 15624672 -104659640 - B2_Mm1a SINE B2 -4 189 2 1 704 297 68 0 0 chr13 15625148 15625192 -104659120 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 704 480 250 111 7 chr13 15625827 15625980 -104658332 - MT2A LTR ERVL -364 169 1 1 704 234 0 0 0 chr13 15626272 15626298 -104658014 + (T)n Simple_repeat Simple_repeat 1 26 0 1 704 416 250 107 6 chr13 15627232 15627438 -104656874 + L1MA4 LINE L1 5680 5904 -396 1 704 1145 88 0 0 chr13 15628114 15628261 -104656051 - B1_Mus2 SINE Alu 0 147 1 1 704 687 259 119 52 chr13 15629807 15630063 -104654249 + Lx8 LINE L1 5611 5916 -1557 1 704 22 0 0 0 chr13 15630591 15630613 -104653699 + AT_rich Low_complexity Low_complexity 1 22 0 1 704 240 186 40 148 chr13 15631008 15631109 -104653203 - B2_Mm2 SINE B2 0 195 106 1 704 363 247 126 84 chr13 15631580 15631619 -104652693 + B3A SINE B2 1 31 -167 1 704 963 108 222 0 chr13 15631619 15631804 -104652508 - URR1A DNA MER1_type 0 226 1 1 704 363 247 126 84 chr13 15631804 15631954 -104652358 + B3A SINE B2 32 197 -1 1 704 774 207 14 20 chr13 15632396 15632544 -104651768 + B1_Mur1 SINE Alu 2 148 -1 1 704 198 71 0 0 chr13 15632712 15632740 -104651572 + (CCCCCA)n Simple_repeat Simple_repeat 5 32 0 1 704 582 93 0 0 chr13 15636410 15636496 -104647816 + (GA)n Simple_repeat Simple_repeat 2 87 0 1 704 230 182 23 0 chr13 15640526 15640570 -104643742 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 704 261 0 0 0 chr13 15640908 15640937 -104643375 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 704 22 0 0 0 chr13 15644923 15644945 -104639367 + AT_rich Low_complexity Low_complexity 1 22 0 1 704 1163 55 7 0 chr13 15649229 15649374 -104634938 - B1_Mus2 SINE Alu 0 147 2 1 704 261 0 0 0 chr13 15649809 15649838 -104634474 + (TGGG)n Simple_repeat Simple_repeat 3 31 0 1 704 340 279 121 55 chr13 15650599 15650781 -104633531 - B3A SINE B2 -3 195 2 1 704 204 40 0 0 chr13 15651002 15651027 -104633285 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1 704 737 164 7 0 chr13 15652736 15652876 -104631436 + CT-rich Low_complexity Low_complexity 2 142 0 1 704 270 0 0 0 chr13 15653212 15653242 -104631070 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 704 1346 229 64 45 chr13 15653257 15653632 -104630680 + MTC LTR MaLR 40 421 0 1 704 1187 183 9 22 chr13 15653862 15654091 -104630221 - URR1A DNA MER1_type 0 226 1 1 704 375 293 34 8 chr13 15654622 15654739 -104629573 - RSINE1 SINE B4 -43 122 3 1 704 417 20 0 0 chr13 15655236 15655286 -104629026 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 704 818 222 88 0 chr13 15655377 15655571 -104628741 + B3 SINE B2 1 211 -5 1 704 189 276 90 22 chr13 15656729 15656818 -104627494 + MIRb SINE MIR 50 144 -124 1 704 947 314 53 6 chr13 15657441 15657915 -104626397 - L1MA4A LINE L1 -375 5928 5433 1 704 369 254 153 8 chr13 15657933 15658064 -104626248 - B3A SINE B2 -2 196 47 1 704 1005 255 60 50 chr13 15658071 15658303 -104626009 - L1MA4A LINE L1 -852 5448 5204 1 704 872 197 124 15 chr13 15658303 15658504 -104625808 - URR1B DNA MER1_type -2 223 1 1 704 1005 266 134 68 chr13 15658504 15658756 -104625556 - L1MA4A LINE L1 -940 5203 4940 1 704 1163 107 6 0 chr13 15658756 15658934 -104625378 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2 704 1005 266 134 68 chr13 15658934 15659215 -104625097 - L1MA4A LINE L1 -1204 4939 4632 1 704 969 296 65 11 chr13 15659613 15659968 -104624344 + MTEa LTR MaLR 4 377 -2 2 704 1008 153 25 45 chr13 15660033 15660231 -104624081 - B2_Mm2 SINE B2 -1 194 1 2 704 294 143 0 0 chr13 15660422 15660471 -104623841 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 2 704 561 219 78 8 chr13 15660481 15660610 -104623702 - B1_Mur3 SINE Alu -11 138 1 2 704 749 217 190 22 chr13 15660688 15660872 -104623440 + B3 SINE B2 2 216 0 2 704 522 287 22 7 chr13 15660917 15661054 -104623258 + RSINE1 SINE B4 3 141 -24 2 704 1117 243 71 20 chr13 15664251 15664603 -104619709 + ORR1D2 LTR MaLR 1 370 0 2 704 22 0 0 0 chr13 15665161 15665183 -104619129 + AT_rich Low_complexity Low_complexity 1 22 0 2 704 326 291 35 76 chr13 15665432 15665577 -104618735 - B1F SINE Alu 0 149 11 2 704 435 19 0 0 chr13 15665585 15665637 -104618675 + (CATA)n Simple_repeat Simple_repeat 2 53 0 2 704 230 81 0 26 chr13 15665745 15665783 -104618529 + (TA)n Simple_repeat Simple_repeat 1 37 0 2 704 330 87 0 0 chr13 15665784 15665830 -104618482 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 2 704 483 336 102 3 chr13 15665831 15666147 -104618165 - Tigger7 DNA MER2_type -2092 399 52 2 704 21 0 0 0 chr13 15666819 15666840 -104617472 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 30 0 0 0 chr13 15667283 15667313 -104616999 + AT_rich Low_complexity Low_complexity 1 30 0 2 704 26 74 0 0 chr13 15667655 15667709 -104616603 + AT_rich Low_complexity Low_complexity 1 54 0 2 704 456 77 0 0 chr13 15667923 15667988 -104616324 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 704 213 313 0 143 chr13 15668206 15668318 -104615994 + MER5A DNA MER1_type 27 122 -67 2 704 651 67 0 0 chr13 15669814 15669903 -104614409 + (TG)n Simple_repeat Simple_repeat 2 90 0 2 704 21 36 0 0 chr13 15670990 15671018 -104613294 + AT_rich Low_complexity Low_complexity 1 28 0 2 704 235 264 28 0 chr13 15671236 15671308 -104613004 + MIRc SINE MIR 162 235 -33 2 704 2266 137 81 20 chr13 15671729 15672123 -104612189 + MTC LTR MaLR 2 419 -2 2 704 27 0 0 0 chr13 15672158 15672185 -104612127 + AT_rich Low_complexity Low_complexity 1 27 0 2 704 477 141 0 0 chr13 15674764 15674849 -104609463 + (CA)n Simple_repeat Simple_repeat 2 86 0 2 704 197 319 97 0 chr13 15676818 15676890 -104607422 - MIRm SINE MIR -197 79 1 2 704 261 333 52 0 chr13 15676950 15677046 -104607266 - B3 SINE B2 -11 205 105 2 704 798 81 0 0 chr13 15677240 15677351 -104606961 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 2 704 1136 69 14 0 chr13 15677357 15677501 -104606811 - B1_Mus2 SINE Alu 0 147 2 2 704 737 267 25 10 chr13 15678461 15678658 -104605654 + ID_B1 SINE B4 6 205 -19 2 704 442 248 90 18 chr13 15678673 15678784 -104605528 + RSINE1 SINE B4 8 126 -39 2 704 786 182 34 20 chr13 15679018 15679164 -104605148 - B1_Mus1 SINE Alu 0 148 1 2 704 23 0 0 0 chr13 15680638 15680661 -104603651 + AT_rich Low_complexity Low_complexity 1 23 0 2 704 351 44 0 0 chr13 15681242 15681287 -104603025 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 704 284 267 0 39 chr13 15681399 15681477 -104602835 - ID_B1 SINE B4 -17 207 133 2 704 468 191 300 0 chr13 15681995 15682105 -104602207 - B1_Mus1 SINE Alu -5 143 1 2 704 21 0 0 0 chr13 15682851 15682872 -104601440 + AT_rich Low_complexity Low_complexity 1 21 0 2 704 655 300 73 50 chr13 15683142 15683482 -104600830 - MLT1A0 LTR MaLR 0 365 18 2 704 1757 201 22 11 chr13 15683449 15683641 -104600671 - ORR1D1 LTR MaLR -5 369 173 2 704 357 24 0 0 chr13 15683641 15683683 -104600629 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 704 1757 201 22 11 chr13 15683683 15683853 -104600459 - ORR1D1 LTR MaLR -202 172 4 2 704 654 164 94 29 chr13 15684852 15684990 -104599322 + B1_Mm SINE Alu 1 147 0 2 704 241 325 79 24 chr13 15685244 15685408 -104598904 + MIRb SINE MIR 76 248 -20 2 704 239 337 61 0 chr13 15686399 15686497 -104597815 - MLT1D LTR MaLR -123 382 279 2 704 326 91 0 43 chr13 15686742 15686811 -104597501 + (T)n Simple_repeat Simple_repeat 1 66 0 2 704 195 331 107 0 chr13 15690367 15690488 -104593824 + MER5A DNA MER1_type 8 141 -48 2 704 263 260 27 0 chr13 15690488 15690561 -104593751 - ID4_ SINE ID -4 79 5 2 704 3098 81 12 12 chr13 15691012 15691425 -104592887 + Lx3_Mus LINE L1 6576 6988 -21 2 704 222 37 0 0 chr13 15691425 15691452 -104592860 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 704 1403 257 13 46 chr13 15691505 15691893 -104592419 + MTEa LTR MaLR 1 375 -4 2 704 333 250 17 126 chr13 15693102 15693153 -104591159 - B1_Mur1 SINE Alu -21 128 89 2 704 5111 35 5 2 chr13 15693153 15693753 -104590559 + L1Md_F3 LINE L1 5983 6584 0 2 704 333 250 17 126 chr13 15693753 15693820 -104590492 - B1_Mur1 SINE Alu -61 88 23 2 704 471 18 0 0 chr13 15694397 15694453 -104589859 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 704 270 0 0 0 chr13 15694625 15694655 -104589657 + (CTG)n Simple_repeat Simple_repeat 1 30 0 2 704 345 237 59 37 chr13 15696840 15696976 -104587336 - Tigger7 DNA MER2_type -113 2378 2240 2 704 738 162 0 0 chr13 15697056 15697173 -104587139 + B3 SINE B2 2 118 -98 2 704 404 121 0 0 chr13 15697241 15697299 -104587013 + B1_Mur4 SINE Alu 66 123 -27 2 704 2444 93 53 11 chr13 15699131 15699489 -104584823 - Lx2 LINE L1 -987 6010 5638 2 704 5002 144 11 5 chr13 15699492 15700307 -104584005 + Lx2 LINE L1 6176 6995 -2 2 704 274 325 0 0 chr13 15700958 15701041 -104583271 - MER58A DNA MER1_type -93 131 49 2 704 22 0 0 0 chr13 15703883 15703905 -104580407 + AT_rich Low_complexity Low_complexity 1 22 0 2 704 333 0 0 0 chr13 15705262 15705299 -104579013 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 704 729 269 0 13 chr13 15705346 15705504 -104578808 - B3A SINE B2 -42 156 1 2 704 192 322 49 16 chr13 15711704 15711827 -104572485 - MIR SINE MIR 0 262 136 2 704 983 333 194 26 chr13 15714111 15714789 -104569523 - Lx8 LINE L1 -213 7260 6469 2 704 414 0 0 0 chr13 15714929 15714975 -104569337 + (GGAAA)n Simple_repeat Simple_repeat 3 48 0 2 704 205 232 0 35 chr13 15714979 15715064 -104569248 + A-rich Low_complexity Low_complexity 4 85 0 2 704 399 245 199 6 chr13 15715072 15715228 -104569084 - Lx7 LINE L1 -393 7303 7118 2 704 965 244 56 49 chr13 15715231 15715498 -104568814 + Lx7 LINE L1 6835 7103 -593 2 704 351 0 0 0 chr13 15715817 15715856 -104568456 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 704 315 0 0 0 chr13 15715856 15715890 -104568422 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 704 214 183 33 16 chr13 15717487 15717548 -104566764 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 704 22 0 0 0 chr13 15717586 15717608 -104566704 + AT_rich Low_complexity Low_complexity 1 22 0 2 704 250 235 0 0 chr13 15717874 15717925 -104566387 - RSINE1 SINE B4 -104 61 11 2 704 242 29 29 0 chr13 15717943 15717978 -104566334 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 704 531 112 0 0 chr13 15718258 15718338 -104565974 + (TC)n Simple_repeat Simple_repeat 1 80 0 2 704 303 221 79 59 chr13 15718737 15718838 -104565474 - PB1D9 SINE Alu -16 104 2 2 704 214 182 36 18 chr13 15718972 15719028 -104565284 + (TTTG)n Simple_repeat Simple_repeat 2 58 0 2 704 324 0 0 0 chr13 15720148 15720184 -104564128 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 704 517 318 43 88 chr13 15720925 15721253 -104563059 - Lx7 LINE L1 -345 7351 7039 2 704 22 0 0 0 chr13 15721508 15721530 -104562782 + AT_rich Low_complexity Low_complexity 1 22 0 2 704 1249 164 18 35 chr13 15721647 15721875 -104562437 - URR1B DNA MER1_type 0 225 2 2 704 414 0 0 0 chr13 15721886 15721932 -104562380 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 704 558 41 0 0 chr13 15721932 15722005 -104562307 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 704 315 287 47 40 chr13 15722280 15722429 -104561883 - L1MEf LINE L1 -5223 977 828 2 704 675 254 138 0 chr13 15724204 15724393 -104559919 + B3 SINE B2 2 216 0 2 704 181 327 0 0 chr13 15724713 15724765 -104559547 - MIR SINE MIR -7 255 204 2 704 321 158 0 34 chr13 15725027 15725086 -104559226 - B1_Mur2 SINE Alu -1 148 92 2 704 462 312 198 45 chr13 15725145 15725413 -104558899 - MTE2b LTR MaLR -68 311 3 2 704 574 288 25 50 chr13 15725678 15725839 -104558473 + RSINE1 SINE B4 3 159 -6 2 704 29 28 0 0 chr13 15726451 15726487 -104557825 + AT_rich Low_complexity Low_complexity 1 36 0 2 704 364 259 235 38 chr13 15726853 15727142 -104557170 - L1ME3B LINE L1 -409 5831 5486 2 10 2051 173 29 27 chr13 15728392 15728767 -104555545 - ORR1C1 LTR MaLR 0 378 3 2 705 388 290 14 0 chr13 15729227 15729365 -104554947 + L1MC1 LINE L1 5694 5833 -500 2 705 299 269 0 0 chr13 15732397 15732464 -104551848 - ID4 SINE ID -14 69 3 2 705 238 277 178 0 chr13 15732466 15732567 -104551745 - B1F SINE Alu -8 141 23 2 705 291 272 22 74 chr13 15733546 15733681 -104550631 - MER5A1 DNA MER1_type -37 129 2 2 705 1347 239 72 3 chr13 15734626 15734975 -104549337 - ORR1D1 LTR MaLR -1 373 1 2 705 24 0 0 0 chr13 15734997 15735021 -104549291 + AT_rich Low_complexity Low_complexity 1 24 0 2 705 1014 127 54 0 chr13 15736852 15737018 -104547294 - B2_Mm1t SINE B2 -14 179 5 2 705 189 74 0 0 chr13 15737162 15737189 -104547123 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 705 340 265 72 0 chr13 15738962 15739045 -104545267 + B1_Mur3 SINE Alu 2 90 -59 2 705 259 271 43 0 chr13 15739648 15739718 -104544594 - MER20 DNA MER1_type -59 160 88 3 705 258 32 0 0 chr13 15739896 15739927 -104544385 + (T)n Simple_repeat Simple_repeat 1 31 0 3 705 22 0 0 0 chr13 15740946 15740968 -104543344 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 215 265 46 46 chr13 15741422 15741452 -104542860 + PB1D10 SINE Alu 31 117 0 3 705 234 246 0 0 chr13 15741452 15741509 -104542803 + ID_B1 SINE B4 168 224 0 3 705 21 0 0 0 chr13 15741595 15741616 -104542696 + AT_rich Low_complexity Low_complexity 1 21 0 3 705 25 105 0 0 chr13 15742399 15742494 -104541818 + AT_rich Low_complexity Low_complexity 1 95 0 3 705 3119 68 2 2 chr13 15744923 15745319 -104538993 + MTA_Mm LTR MaLR 1 396 0 3 705 182 319 61 41 chr13 15745360 15745458 -104538854 - L2c LINE L2 -2 3385 3286 3 705 321 227 126 74 chr13 15746797 15746892 -104537420 + PB1D9 SINE Alu 15 114 -6 3 705 203 114 23 0 chr13 15747871 15747915 -104536397 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 705 263 258 0 70 chr13 15748249 15748320 -104535992 - ID4_ SINE ID 0 83 18 3 705 1001 246 35 0 chr13 15748420 15748623 -104535689 - B3 SINE B2 -4 212 3 3 705 662 200 59 20 chr13 15748972 15749125 -104535187 + MTD LTR MaLR 43 201 -218 3 705 513 0 0 0 chr13 15749390 15749447 -104534865 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 3 705 548 282 128 40 chr13 15749468 15749764 -104534548 + MLT1D LTR MaLR 1 322 -183 3 705 249 33 0 0 chr13 15750798 15750828 -104533484 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 705 212 143 0 0 chr13 15754077 15754112 -104530200 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 705 266 315 14 80 chr13 15754925 15755063 -104529249 - Tigger7 DNA MER2_type -1369 1122 994 3 705 779 146 264 22 chr13 15755203 15755385 -104528927 - URR1A DNA MER1_type 0 226 1 3 705 22 0 0 0 chr13 15756345 15756367 -104527945 + AT_rich Low_complexity Low_complexity 1 22 0 3 705 252 0 0 0 chr13 15757320 15757348 -104526964 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 3 705 315 130 0 0 chr13 15759958 15760012 -104524300 + (GAAAA)n Simple_repeat Simple_repeat 2 55 0 3 705 213 39 0 0 chr13 15761808 15761834 -104522478 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 3 705 2550 246 111 13 chr13 15763019 15763863 -104520449 - RCHARR1 DNA MER1_type -2 972 46 3 705 360 281 50 9 chr13 15763938 15764166 -104520146 - L1MB7 LINE L1 -62 6118 5878 3 705 374 311 118 32 chr13 15764178 15764424 -104519888 - L1MB7 LINE L1 -288 5896 5630 3 705 6590 155 42 14 chr13 15765001 15766224 -104518088 - Lx2B LINE L1 -3 6997 5741 3 705 376 20 0 0 chr13 15766227 15766278 -104518034 - Lx3_Mus LINE L1 -1035 5974 5924 3 705 279 0 0 0 chr13 15766280 15766311 -104518001 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 3 705 362 301 93 44 chr13 15767191 15767396 -104516916 - RMER15 LTR ERVL -16 559 345 3 705 560 292 271 42 chr13 15767671 15767903 -104516409 - B4 SINE B4 -6 286 2 3 705 461 242 21 0 chr13 15768296 15768391 -104515921 - PB1D9 SINE Alu -1 119 23 3 705 278 254 137 16 chr13 15768610 15768734 -104515578 - MER115 DNA Tip100 -32 661 523 3 705 294 106 0 0 chr13 15769667 15769714 -104514598 + (CCCCCT)n Simple_repeat Simple_repeat 3 49 0 3 705 324 0 0 0 chr13 15769715 15769751 -104514561 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 705 214 259 0 94 chr13 15769757 15769821 -104514491 - ID4_ SINE ID -16 67 10 3 705 1762 203 49 17 chr13 15771221 15771627 -104512685 - MTC LTR MaLR 0 421 3 3 705 877 140 257 0 chr13 15771805 15771984 -104512328 - URR1B DNA MER1_type 0 225 1 3 705 299 299 15 0 chr13 15772089 15772156 -104512156 + B3 SINE B2 96 163 -53 3 705 470 197 52 15 chr13 15772191 15772325 -104511987 - Lx9 LINE L1 0 7644 7506 3 705 565 157 52 225 chr13 15772570 15772743 -104511569 - B1_Mur4 SINE Alu -6 144 2 3 705 507 292 146 25 chr13 15773044 15773202 -104511110 - ID_B1 SINE B4 -47 177 1 3 705 438 289 0 0 chr13 15773508 15773612 -104510700 - ID_B1 SINE B4 -27 197 94 3 705 268 306 42 0 chr13 15773549 15773621 -104510691 - PB1D10 SINE Alu -42 75 1 3 705 351 0 0 0 chr13 15773682 15773721 -104510591 + (TTGG)n Simple_repeat Simple_repeat 2 40 0 3 705 21 57 0 0 chr13 15773831 15773866 -104510446 + AT_rich Low_complexity Low_complexity 1 35 0 3 705 243 0 0 0 chr13 15773932 15773959 -104510353 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 705 453 277 36 0 chr13 15774167 15774279 -104510033 - RSINE1 SINE B4 -38 127 12 3 705 22 70 0 0 chr13 15774731 15774774 -104509538 + AT_rich Low_complexity Low_complexity 1 43 0 3 705 24 53 0 0 chr13 15774780 15774818 -104509494 + AT_rich Low_complexity Low_complexity 1 38 0 3 705 8483 99 3 41 chr13 15774827 15776380 -104507932 - Lx3B LINE L1 -5 6968 5493 3 705 783 302 40 14 chr13 15776423 15776772 -104507540 - Lx9 LINE L1 -137 7507 7150 3 705 2256 267 80 47 chr13 15776785 15777497 -104506815 - L1_Rod LINE L1 -1412 4435 3709 3 705 1160 113 90 0 chr13 15777497 15777674 -104506638 - B2_Mm2 SINE B2 -2 193 1 3 705 2713 263 85 52 chr13 15777674 15777731 -104506581 - L1_Rod LINE L1 -2139 3708 3648 3 705 730 217 14 27 chr13 15777731 15777878 -104506434 - B1_Mur2 SINE Alu 0 149 5 3 705 2713 263 85 52 chr13 15777878 15778289 -104506023 - L1_Rod LINE L1 -2200 3647 3214 3 705 293 325 34 17 chr13 15778716 15778835 -104505477 - L2a LINE L2 -9 3417 3297 3 705 261 0 0 0 chr13 15779682 15779711 -104504601 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 705 378 0 0 0 chr13 15779751 15779793 -104504519 + (TAAAA)n Simple_repeat Simple_repeat 5 46 0 3 705 388 279 140 45 chr13 15780961 15781269 -104503043 - Lx8 LINE L1 -10 7463 7127 3 705 1161 255 143 54 chr13 15781324 15781920 -104502392 - L1_Mur3 LINE L1 -2060 3820 3172 3 705 1030 296 101 93 chr13 15781939 15782846 -104501466 - L1_Mur3 LINE L1 -2954 2926 2061 3 705 240 86 0 0 chr13 15782846 15782881 -104501431 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 705 1030 296 101 93 chr13 15782881 15783631 -104500681 - L1_Mur3 LINE L1 -3820 2060 1255 3 705 388 51 68 0 chr13 15784539 15784652 -104499660 - L1Md_F2 LINE L1 0 6582 6519 3 705 829 228 115 146 chr13 15784997 15785388 -104498924 + MTE2a LTR MaLR 1 379 0 3 705 450 0 0 0 chr13 15787891 15787941 -104496371 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 705 392 55 0 18 chr13 15788870 15788926 -104495386 + (TA)n Simple_repeat Simple_repeat 1 55 0 3 705 249 198 277 9 chr13 15789566 15789678 -104494634 - Lx4B LINE L1 -17 7041 6900 3 705 514 242 37 3 chr13 15789676 15789802 -104494510 - Lx4B LINE L1 -289 6769 6653 3 705 189 147 0 0 chr13 15789828 15789862 -104494450 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 3 705 444 82 0 0 chr13 15790086 15790147 -104494165 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 705 1033 137 40 0 chr13 15792930 15793130 -104491182 + URR1B DNA MER1_type 3 225 0 3 705 4031 49 19 8 chr13 15793346 15793816 -104490496 - MT2C_Mm LTR ERVL 0 475 1 3 705 397 311 42 8 chr13 15794543 15794663 -104489649 + B4A SINE B4 55 178 -114 3 705 463 292 0 0 chr13 15796179 15796292 -104488020 - PB1D10 SINE Alu -2 115 3 3 705 306 320 88 24 chr13 15797622 15797827 -104486485 - L1MB5 LINE L1 -145 6029 5812 3 705 203 0 0 36 chr13 15797868 15797896 -104486416 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 3 705 423 0 0 0 chr13 15798952 15798999 -104485313 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 705 21 0 0 0 chr13 15800319 15800340 -104483972 + AT_rich Low_complexity Low_complexity 1 21 0 3 705 183 42 0 0 chr13 15800776 15800800 -104483512 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 705 1158 80 0 0 chr13 15801007 15801285 -104483027 + (TG)n Simple_repeat Simple_repeat 1 278 0 3 705 238 298 122 32 chr13 15802660 15802816 -104481496 + L2a LINE L2 3221 3390 -36 3 705 224 59 29 0 chr13 15804389 15804423 -104479889 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 705 574 234 128 61 chr13 15804435 15804458 -104479854 + B3 SINE B2 1 20 -196 3 705 1135 195 22 14 chr13 15804458 15804681 -104479631 + URR1B DNA MER1_type 1 225 0 3 705 574 234 128 61 chr13 15804681 15804853 -104479459 + B3 SINE B2 21 209 -7 3 705 379 296 55 16 chr13 15805801 15805928 -104478384 - RSINE1 SINE B4 -31 134 3 3 705 240 281 35 0 chr13 15805969 15806026 -104478286 + ID SINE ID 2 60 -164 3 705 256 188 42 0 chr13 15808154 15808202 -104476110 + L1MB7 LINE L1 5932 5981 -203 3 705 180 0 0 0 chr13 15808293 15808313 -104475999 + (T)n Simple_repeat Simple_repeat 1 20 0 3 705 212 354 0 58 chr13 15809580 15809609 -104474703 + ID SINE ID 60 83 -141 3 705 277 274 39 10 chr13 15809609 15809705 -104474607 + B1F SINE Alu 3 105 -12 3 705 447 106 0 0 chr13 15810740 15810806 -104473506 + (CAGA)n Simple_repeat Simple_repeat 3 68 0 3 705 326 312 69 80 chr13 15810813 15811001 -104473311 - MER2 DNA MER2_type -138 207 22 3 705 196 337 74 90 chr13 15812498 15812808 -104471504 - L2b LINE L2 -29 3358 3054 3 705 186 71 0 0 chr13 15813378 15813406 -104470906 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 705 1349 54 16 11 chr13 15815906 15816092 -104468220 + L1_Mus3 LINE L1 6449 6635 -3 3 705 21 0 0 0 chr13 15816102 15816123 -104468189 + GC_rich Low_complexity Low_complexity 1 21 0 3 705 204 319 0 0 chr13 15820749 15820821 -104463491 + CT-rich Low_complexity Low_complexity 2 73 0 3 705 216 0 0 0 chr13 15820908 15820932 -104463380 + (A)n Simple_repeat Simple_repeat 1 24 0 3 705 25 0 0 0 chr13 15821795 15821820 -104462492 + AT_rich Low_complexity Low_complexity 1 25 0 3 705 544 232 27 0 chr13 15822078 15822190 -104462122 + B3 SINE B2 2 116 -100 3 705 762 227 78 113 chr13 15822205 15822681 -104461631 - MT2A LTR ERVL -7 526 1 3 705 1195 204 45 0 chr13 15822974 15823175 -104461137 - B3 SINE B2 -6 210 1 3 705 32206 102 23 4 chr13 15823547 15829722 -104454590 + L1_Mus1 LINE L1 264 6566 -1 3 705 414 0 0 0 chr13 15829885 15829931 -104454381 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 705 1064 206 281 48 chr13 15829934 15830307 -104454005 - MT2A LTR ERVL -71 462 3 4 705 207 209 30 0 chr13 15830657 15830678 -104453634 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 4 705 842 203 7 0 chr13 15830678 15830826 -104453486 + B1_Mur3 SINE Alu 1 149 0 4 705 207 209 30 0 chr13 15830826 15830871 -104453441 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 4 705 1055 210 74 9 chr13 15830875 15831091 -104453221 - Lx7 LINE L1 -950 6746 6517 4 705 528 210 41 14 chr13 15831347 15831492 -104452820 + L1_Mur3 LINE L1 898 1046 -6666 4 705 1261 55 7 0 chr13 15832116 15832261 -104452051 + B1_Mus2 SINE Alu 2 147 0 4 705 262 300 122 24 chr13 15835119 15835242 -104449070 - MER21B LTR ERV1 -323 540 406 4 705 643 265 87 29 chr13 15836274 15836515 -104447797 + MER31-int LTR ERV1 799 1053 -3883 4 705 7761 75 23 2 chr13 15836550 15837591 -104446721 - L1_Mus3 LINE L1 0 6638 5590 4 705 270 0 0 0 chr13 15837591 15837621 -104446691 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 705 1109 65 0 0 chr13 15837621 15837759 -104446553 - B1_Mm SINE Alu -9 138 1 4 705 1490 78 16 0 chr13 15837759 15837949 -104446363 - B2_Mm2 SINE B2 -1 194 1 4 705 4278 113 3 28 chr13 15837949 15838328 -104445984 - L1_Mm LINE L1 -280 5603 5227 4 705 431 301 37 26 chr13 15838328 15838519 -104445793 + MER31-int LTR ERV1 1081 1273 -3663 4 705 2189 167 30 49 chr13 15838536 15838641 -104445671 + MTC LTR MaLR 1 89 -332 4 705 2968 84 13 3 chr13 15838641 15839033 -104445279 - MTA_Mm LTR MaLR 0 396 1 4 705 2189 167 30 49 chr13 15839033 15839356 -104444956 + MTC LTR MaLR 90 421 0 4 705 2293 208 105 56 chr13 15839360 15840299 -104444013 + MTC-int LTR MaLR 5 980 -118 4 705 5116 100 21 9 chr13 15840312 15841060 -104443252 - Lx3A LINE L1 -4 6977 6221 4 705 1966 63 28 0 chr13 15841060 15841315 -104442997 - Lx3_Mus LINE L1 -1067 5942 5681 4 705 856 201 92 7 chr13 15841316 15841530 -104442782 - ORR1D1 LTR MaLR -10 411 134 4 705 387 304 74 31 chr13 15842107 15842329 -104441983 + L1MA5A LINE L1 5570 5864 -433 4 705 331 256 35 0 chr13 15842833 15842919 -104441393 + L1MA5A LINE L1 5850 5938 -362 4 705 182 37 0 36 chr13 15843499 15843527 -104440785 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 4 705 1586 216 64 20 chr13 15843557 15843949 -104440363 - MTD LTR MaLR 0 419 11 4 705 6474 50 0 6 chr13 15844525 15845314 -104438998 - L1_Mus1 LINE L1 -1 6566 5783 4 705 314 82 0 47 chr13 15845325 15845389 -104438923 + (TTTTTG)n Simple_repeat Simple_repeat 4 64 0 4 705 1064 58 50 0 chr13 15845398 15845537 -104438775 - B1_Mus2 SINE Alu -1 146 1 4 705 535 0 0 0 chr13 15845537 15845597 -104438715 - L1_Mus3 LINE L1 -841 5797 5738 4 705 1549 52 21 0 chr13 15845597 15845788 -104438524 - B2_Mm2 SINE B2 0 195 1 4 705 505 43 0 54 chr13 15845788 15845802 -104438510 - Lx2A1 LINE L1 -1271 5737 5727 4 705 646 305 17 0 chr13 15845968 15846145 -104438167 - B4A SINE B4 -5 287 108 4 705 821 304 119 35 chr13 15846580 15847160 -104437152 + MER31-int LTR ERV1 3488 4116 -820 4 705 256 314 57 0 chr13 15847403 15847508 -104436804 + MER31-int LTR ERV1 4360 4470 -466 4 705 200 61 0 57 chr13 15847995 15848030 -104436282 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 4 705 189 273 45 0 chr13 15848819 15848863 -104435449 + MIRc SINE MIR 76 121 -147 4 705 666 258 0 7 chr13 15849865 15850017 -104434295 + B3A SINE B2 1 151 -47 4 705 771 104 0 0 chr13 15850044 15850159 -104434153 + (GA)n Simple_repeat Simple_repeat 1 115 0 4 705 212 54 54 0 chr13 15851918 15851955 -104432357 + (TGGGGG)n Simple_repeat Simple_repeat 1 39 0 4 705 723 62 0 0 chr13 15852343 15852440 -104431872 + (TC)n Simple_repeat Simple_repeat 2 98 0 4 705 1058 81 0 7 chr13 15852440 15852577 -104431735 - B1_Mus2 SINE Alu -10 137 2 4 705 396 0 0 0 chr13 15852597 15852641 -104431671 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 705 751 292 112 7 chr13 15852745 15853021 -104431291 - Lx8 LINE L1 -911 6562 6258 4 705 1130 281 49 9 chr13 15853152 15853496 -104430816 + ORR1D2 LTR MaLR 10 367 -3 4 705 259 175 0 101 chr13 15853539 15853628 -104430684 - L1_Rod LINE L1 -6489 683 604 4 705 1146 15 0 0 chr13 15853686 15853818 -104430494 + (TCTCC)n Simple_repeat Simple_repeat 2 133 0 4 705 840 200 0 0 chr13 15853843 15854023 -104430289 + CT-rich Low_complexity Low_complexity 1 180 0 4 705 3471 126 22 37 chr13 15855862 15856455 -104427857 + MT2B LTR ERVL 18 601 0 4 705 2094 170 35 10 chr13 15856862 15857265 -104427047 + MTC LTR MaLR 1 413 -8 4 705 227 245 196 31 chr13 15857339 15857436 -104426876 + MLT2B5 LTR ERVL 163 275 -442 4 705 366 264 11 22 chr13 15857357 15857446 -104426866 + MTE2a LTR MaLR 57 144 -235 4 705 253 257 58 19 chr13 15857716 15857819 -104426493 + MLT1A1 LTR MaLR 19 125 -283 4 705 277 291 0 19 chr13 15857929 15858034 -104426278 + MLT1A1 LTR MaLR 304 406 -2 4 705 3207 71 5 0 chr13 15858215 15858611 -104425701 - MTB LTR MaLR -2 398 1 4 705 1422 278 31 38 chr13 15858785 15859207 -104425105 + RMER1B Other Other 3 421 -645 4 88 3863 236 47 25 chr13 15859188 15860743 -104423569 + RMER1A Other Other 1 1029 -1 4 706 4531 132 46 17 chr13 15860855 15861571 -104422741 - RMER19A LTR ERVK 0 737 1 4 706 918 267 160 24 chr13 15861601 15861970 -104422342 - MTD LTR MaLR 0 419 1 4 706 230 329 49 7 chr13 15861998 15862142 -104422170 - MIR SINE MIR -48 214 65 4 706 246 136 0 0 chr13 15864808 15864852 -104419460 + (A)n Simple_repeat Simple_repeat 1 44 0 4 706 531 219 101 0 chr13 15864861 15864980 -104419332 - MTE2a LTR MaLR -9 370 240 4 706 633 146 0 0 chr13 15865022 15865159 -104419153 + (CCTG)n Simple_repeat Simple_repeat 2 138 0 4 706 4876 206 58 37 chr13 15865166 15866195 -104418117 - RMER1B Other Other -15 1051 1 4 706 545 287 72 0 chr13 15866236 15866403 -104417909 - MTE2a LTR MaLR -200 179 1 4 706 1627 316 86 19 chr13 15866403 15866536 -104417776 - MTE2a-int LTR MaLR -16 1564 1429 4 706 1567 219 53 14 chr13 15866536 15866892 -104417420 + ORR1D2 LTR MaLR 1 370 0 4 706 1627 316 86 19 chr13 15866892 15867431 -104416881 - MTE2a-int LTR MaLR -152 1428 847 4 706 189 107 0 0 chr13 15867715 15867743 -104416569 + (GGAGAA)n Simple_repeat Simple_repeat 1 28 0 4 706 329 218 125 22 chr13 15867924 15868060 -104416252 + L1MB8 LINE L1 6020 6169 -9 4 706 1033 163 16 5 chr13 15868599 15868784 -104415528 - URR1B DNA MER1_type -4 221 35 4 706 1442 241 30 38 chr13 15868860 15869231 -104415081 - ORR1D2 LTR MaLR 0 370 3 4 706 1242 271 19 100 chr13 15870406 15870816 -104413496 + MTE2b LTR MaLR 1 377 -2 4 706 2945 294 90 12 chr13 15870817 15871238 -104413074 + MTE2b-int LTR MaLR 4 443 -1137 4 706 213 39 0 0 chr13 15871238 15871264 -104413048 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 706 2945 294 90 12 chr13 15871264 15871965 -104412347 + MTE2b-int LTR MaLR 444 1213 -367 4 706 488 254 50 8 chr13 15872494 15872613 -104411699 + MTE2b LTR MaLR 132 255 -124 4 706 308 176 73 0 chr13 15872625 15872693 -104411619 + MTE2b LTR MaLR 300 372 -7 4 706 667 253 32 0 chr13 15872739 15872893 -104411419 + RSINE1 SINE B4 5 163 -2 4 706 201 213 21 0 chr13 15874332 15874379 -104409933 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 706 918 224 127 10 chr13 15874462 15874779 -104409533 - ORR1D1 LTR MaLR -4 370 26 4 706 1895 267 41 2 chr13 15874928 15875419 -104408893 + Lx7 LINE L1 6792 7301 -395 4 706 351 0 0 0 chr13 15875419 15875458 -104408854 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 706 373 350 44 26 chr13 15877212 15877438 -104406874 - MIR SINE MIR -2 260 31 4 706 195 49 0 68 chr13 15879118 15879162 -104405150 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 4 706 306 221 62 10 chr13 15879386 15879482 -104404830 - PB1D10 SINE Alu 0 117 17 4 706 1333 154 248 17 chr13 15880070 15880368 -104403944 - ORR1B2 LTR MaLR 0 367 1 4 706 291 278 121 9 chr13 15880848 15880964 -104403348 + L1M3e LINE L1 139 267 -6763 4 706 742 236 60 37 chr13 15882687 15882758 -104401554 - L1_Mur3 LINE L1 -777 5103 5034 4 706 1407 254 33 11 chr13 15882758 15883120 -104401192 + ORR1D2 LTR MaLR 1 370 0 4 706 742 236 60 37 chr13 15883120 15883264 -104401048 - L1_Mur3 LINE L1 -847 5033 4883 4 706 1159 266 138 55 chr13 15883335 15883743 -104400569 - Lx9 LINE L1 0 7644 7235 4 706 5635 60 0 4 chr13 15883743 15884444 -104399868 - L1Md_F2 LINE L1 0 6582 5885 4 706 1159 266 138 55 chr13 15884444 15884724 -104399588 - Lx9 LINE L1 -410 7234 6899 4 706 1636 238 104 89 chr13 15884728 15885689 -104398623 + RMER17B LTR ERVK 1 899 -9 4 706 972 271 86 4 chr13 15885705 15885983 -104398329 - Lx9 LINE L1 -752 6892 6592 4 706 3348 256 55 82 chr13 15885983 15887093 -104397219 + L1MA5 LINE L1 4493 5579 -268 4 706 315 0 0 0 chr13 15887093 15887128 -104397184 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 706 3348 277 61 74 chr13 15887128 15887659 -104396653 + L1MA5 LINE L1 5580 6122 -1351 4 706 218 225 0 0 chr13 15887728 15887768 -104396544 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 706 744 294 45 26 chr13 15887768 15888037 -104396275 + L1MA5 LINE L1 6327 6600 -1044 4 706 1421 259 121 55 chr13 15888167 15888440 -104395872 + L1MA4 LINE L1 3146 3447 -2696 4 706 273 286 29 0 chr13 15888440 15888510 -104395802 + ID4_ SINE ID 1 72 -11 4 706 1135 269 116 50 chr13 15888510 15889069 -104395243 + L1MA4 LINE L1 3448 4033 -2110 4 706 1283 257 69 9 chr13 15889070 15889419 -104394893 + ORR1D2 LTR MaLR 1 370 0 4 706 421 265 16 98 chr13 15889489 15889673 -104394639 + L1MA4 LINE L1 4983 5151 -992 4 706 537 270 60 61 chr13 15889722 15890069 -104394243 + MTD LTR MaLR 18 419 0 4 706 264 354 28 9 chr13 15890069 15890187 -104394125 + B1F SINE Alu 22 141 -8 4 706 230 95 24 0 chr13 15890248 15890290 -104394022 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 4 706 422 282 77 32 chr13 15890422 15890736 -104393576 + L1MA4 LINE L1 5161 5488 -812 4 706 763 10 21 0 chr13 15890736 15890832 -104393480 + (CAAAC)n Simple_repeat Simple_repeat 2 99 0 4 706 200 93 45 23 chr13 15890838 15890882 -104393430 + (CAAA)n Simple_repeat Simple_repeat 3 47 0 4 706 1043 308 76 16 chr13 15890895 15891472 -104392840 + L1MA4 LINE L1 5492 6103 -197 4 706 948 238 48 16 chr13 15891480 15891732 -104392580 - RCHARR1 DNA MER1_type -6 968 709 4 706 2228 110 6 0 chr13 15891739 15892056 -104392256 - ORR1A2 LTR MaLR -8 319 1 4 706 920 278 192 14 chr13 15892077 15892627 -104391685 - RCHARR1 DNA MER1_type -324 650 3 4 706 294 228 117 8 chr13 15892694 15892822 -104391490 + L1MA4 LINE L1 6150 6291 -6 4 706 6356 8 0 0 chr13 15892844 15893548 -104390764 + L1Md_T LINE L1 5874 6577 -5 4 706 261 0 0 0 chr13 15893548 15893577 -104390735 + (TAA)n Simple_repeat Simple_repeat 2 30 0 4 706 251 331 35 49 chr13 15893665 15893808 -104390504 + L2c LINE L2 3243 3383 -4 4 706 527 301 41 74 chr13 15894120 15894389 -104389923 + MER121 Unknown Unknown 148 407 -5 4 706 243 0 0 0 chr13 15894527 15894554 -104389758 + (T)n Simple_repeat Simple_repeat 1 27 0 4 706 187 284 67 11 chr13 15895531 15895620 -104388692 + MIRb SINE MIR 113 206 -62 5 706 417 327 32 51 chr13 15896743 15896901 -104387411 + B4A SINE B4 24 178 -114 5 706 329 261 30 42 chr13 15897004 15897234 -104387078 + (CATATA)n Simple_repeat Simple_repeat 1 227 0 5 706 288 306 23 34 chr13 15897183 15897359 -104386953 + (CATA)n Simple_repeat Simple_repeat 1 174 0 5 706 496 85 44 51 chr13 15897758 15897895 -104386417 + (CAGAGA)n Simple_repeat Simple_repeat 1 136 0 5 706 185 94 0 30 chr13 15898207 15898240 -104386072 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 706 530 336 14 9 chr13 15898415 15898628 -104385684 - ID_B1 SINE B4 -10 214 1 5 706 224 318 65 43 chr13 15898628 15898766 -104385546 - MIR SINE MIR -114 148 8 5 706 236 286 139 73 chr13 15899589 15899740 -104384572 - L2a LINE L2 0 3426 3266 5 706 186 43 0 0 chr13 15899802 15899825 -104384487 + (A)n Simple_repeat Simple_repeat 1 23 0 5 706 213 272 43 17 chr13 15900240 15900356 -104383956 + (TATG)n Simple_repeat Simple_repeat 1 119 0 5 706 229 299 13 0 chr13 15900241 15900318 -104383994 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 706 397 301 43 78 chr13 15900358 15900589 -104383723 - B4A SINE B4 -2 290 68 5 706 26 30 0 0 chr13 15901053 15901086 -104383226 + AT_rich Low_complexity Low_complexity 1 33 0 5 706 24 67 0 0 chr13 15901142 15901187 -104383125 + AT_rich Low_complexity Low_complexity 1 45 0 5 706 543 194 32 0 chr13 15901317 15901410 -104382902 - PB1D10 SINE Alu -21 96 1 5 706 5594 43 0 9 chr13 15901625 15902313 -104381999 - L1Md_F2 LINE L1 0 6582 5901 5 706 2761 98 7 0 chr13 15902313 15902721 -104381591 - L1Md_F LINE L1 -5719 800 390 5 706 7602 39 9 10 chr13 15902739 15902840 -104381472 - L1Md_F3 LINE L1 0 6584 6489 5 706 3408 25 5 0 chr13 15902840 15903234 -104381078 + MTA_Mm LTR MaLR 1 396 0 5 706 7602 42 8 8 chr13 15903234 15904314 -104379998 - L1Md_F3 LINE L1 -96 6488 5401 5 706 524 267 17 17 chr13 15904341 15904561 -104379751 + Lx8 LINE L1 5775 5996 -1477 5 706 260 315 9 18 chr13 15904778 15904891 -104379421 + CT-rich Low_complexity Low_complexity 2 113 0 5 706 2023 319 89 60 chr13 15904893 15906545 -104377767 - Lx7 LINE L1 -383 7313 5615 5 706 3227 254 42 48 chr13 15907260 15908469 -104375843 - Lx7 LINE L1 -302 5578 4377 5 706 711 278 71 0 chr13 15908478 15908676 -104375636 - B3 SINE B2 -3 213 2 5 706 884 248 44 14 chr13 15908741 15909035 -104375277 - Lx7 LINE L1 -1544 4336 4034 5 706 254 319 0 0 chr13 15909116 15909217 -104375095 + L1_Rod LINE L1 3943 4064 -2079 5 706 345 250 48 0 chr13 15909208 15909312 -104375000 - L1M2 LINE L1 -2475 3668 3560 5 706 845 283 17 0 chr13 15909368 15909665 -104374647 - Lx7 LINE L1 -1869 4011 3710 5 706 3054 56 0 10 chr13 15909665 15910113 -104374199 - L1Md_F2 LINE L1 0 6582 6160 5 706 370 273 43 21 chr13 15910108 15910295 -104374017 - Lx7 LINE L1 -2162 3718 3528 5 706 1240 92 97 5 chr13 15910546 15910742 -104373570 + Lx3C LINE L1 6761 6974 -2 5 706 500 273 61 94 chr13 15910856 15911216 -104373096 - Lx7 LINE L1 -2751 3129 2772 5 706 317 312 160 26 chr13 15911594 15911788 -104372524 - MLT1K LTR MaLR -1 594 375 5 706 1129 203 22 22 chr13 15911854 15912076 -104372236 - MTD LTR MaLR -1 418 197 5 706 1369 236 30 36 chr13 15913119 15913806 -104370506 + L1_Rod LINE L1 926 1616 -4231 5 706 839 240 75 49 chr13 15913814 15914121 -104370191 + Lx9 LINE L1 6831 7145 -499 5 706 570 298 130 47 chr13 15914134 15914388 -104369924 + MTEa LTR MaLR 53 327 -52 5 706 1005 247 43 10 chr13 15914427 15914729 -104369583 + Lx9 LINE L1 7120 7431 -213 5 706 1242 236 93 40 chr13 15915259 15915656 -104368656 + MTD LTR MaLR 1 418 -1 5 706 294 226 179 0 chr13 15916709 15916793 -104367519 - MLT1A0 LTR MaLR -263 102 4 5 706 333 100 0 0 chr13 15916884 15916934 -104367378 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 5 706 485 266 28 14 chr13 15917401 15917546 -104366766 - L1M5 LINE L1 -499 5680 5534 5 706 354 23 0 0 chr13 15917547 15917590 -104366722 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 706 382 124 16 0 chr13 15917597 15917669 -104366643 - Lx5 LINE L1 -1499 5961 5892 5 706 1318 271 50 33 chr13 15917698 15918178 -104366134 + Lx6 LINE L1 6947 7434 -26 5 706 373 19 0 36 chr13 15918210 15918266 -104366046 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 5 706 325 351 43 14 chr13 15918367 15918506 -104365806 + MLT1A0 LTR MaLR 223 408 0 5 706 253 215 52 26 chr13 15919566 15919719 -104364593 + CT-rich Low_complexity Low_complexity 1 157 0 5 706 312 291 109 22 chr13 15919729 15919866 -104364446 - HAL1-3A_ME LINE L1 -419 2439 2291 5 706 452 268 106 0 chr13 15921182 15921305 -104363007 - MTE2b LTR MaLR -52 327 192 5 706 831 21 0 0 chr13 15921309 15921406 -104362906 + (TC)n Simple_repeat Simple_repeat 2 98 0 5 706 381 267 29 19 chr13 15921785 15921888 -104362424 - PB1D10 SINE Alu -13 104 1 5 706 767 193 10 113 chr13 15922245 15922299 -104362013 + ORR1C1 LTR MaLR 1 53 -325 5 706 2862 38 18 0 chr13 15922299 15922639 -104361673 - ORR1A1 LTR MaLR 0 346 1 5 706 767 193 10 113 chr13 15922639 15922788 -104361524 + ORR1C1 LTR MaLR 54 183 -195 5 706 240 200 0 0 chr13 15922802 15922872 -104361440 + CT-rich Low_complexity Low_complexity 1 70 0 5 706 1100 179 77 0 chr13 15922872 15923068 -104361244 + ORR1C1 LTR MaLR 166 376 -2 5 706 1402 286 43 2 chr13 15923070 15923487 -104360825 + Lx7 LINE L1 6843 7276 -420 5 706 2285 33 2 245 chr13 15923488 15923973 -104360339 + RLTR10 LTR ERVK 22 388 -2 5 706 16108 24 2 1 chr13 15923985 15925930 -104358382 + RLTR10-int LTR ERVK 41 1986 -1 5 706 2624 31 2 234 chr13 15925930 15926435 -104357877 + RLTR10 LTR ERVK 1 388 -2 5 706 16108 24 2 1 chr13 15926447 15928392 -104355920 + RLTR10-int LTR ERVK 41 1986 -1 5 706 2311 42 2 287 chr13 15928392 15928932 -104355380 + RLTR10 LTR ERVK 1 386 -4 5 706 789 296 64 0 chr13 15928943 15929210 -104355102 + Lx7 LINE L1 7020 7303 -393 5 706 324 0 0 0 chr13 15929212 15929248 -104355064 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 706 216 0 0 0 chr13 15929248 15929271 -104355041 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 706 183 42 0 0 chr13 15929468 15929492 -104354820 + (TTG)n Simple_repeat Simple_repeat 2 25 0 5 706 1174 76 0 0 chr13 15929492 15929636 -104354676 - B1_Mus2 SINE Alu -3 144 1 5 706 346 276 25 119 chr13 15930040 15930199 -104354113 + B1_Mur4 SINE Alu 6 150 0 5 706 534 202 2 23 chr13 15930247 15930364 -104353948 - ORR1B1 LTR MaLR -2 392 260 5 706 24 0 0 0 chr13 15930658 15930682 -104353630 + AT_rich Low_complexity Low_complexity 1 24 0 5 706 2909 237 60 81 chr13 15930839 15930969 -104353343 + L1_Rod LINE L1 3071 3172 -2675 5 706 1132 88 0 0 chr13 15930969 15931116 -104353196 + B1_Mus2 SINE Alu 1 147 0 5 706 2909 237 60 81 chr13 15931116 15932325 -104351987 + L1_Rod LINE L1 3173 4382 -1465 5 706 1510 166 68 14 chr13 15932325 15932618 -104351694 - RLTR27 LTR ERVK 0 309 1 5 706 2147 236 134 2 chr13 15933888 15934499 -104349813 - Lx9 LINE L1 -595 7049 6358 5 706 360 0 0 0 chr13 15934499 15934539 -104349773 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 706 295 273 93 55 chr13 15934659 15934841 -104349471 - Lx9 LINE L1 -1591 6053 5865 5 706 1126 239 114 37 chr13 15934840 15935180 -104349132 + Lx9 LINE L1 7074 7439 -205 5 706 495 82 0 0 chr13 15935180 15935253 -104349059 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 706 1126 239 114 37 chr13 15935253 15935293 -104349019 + Lx9 LINE L1 7440 7493 -151 5 706 2183 44 2 301 chr13 15935293 15935844 -104348468 + RLTR10 LTR ERVK 1 386 -4 5 706 1126 239 114 37 chr13 15935844 15935952 -104348360 + Lx9 LINE L1 7494 7601 -43 5 706 24 53 0 0 chr13 15935952 15935990 -104348322 + AT_rich Low_complexity Low_complexity 1 38 0 5 706 1062 186 50 90 chr13 15936843 15937139 -104347173 + ORR1C2 LTR MaLR 1 282 -88 5 706 911 66 87 7 chr13 15937139 15937277 -104347035 - Lx3B LINE L1 -973 6000 5852 5 706 1099 164 91 17 chr13 15937272 15937502 -104346810 + Lx3C LINE L1 6095 6341 -635 5 706 1181 205 13 26 chr13 15937502 15937732 -104346580 - ORR1B1 LTR MaLR -127 267 41 5 706 339 105 0 0 chr13 15938770 15938827 -104345485 + (TC)n Simple_repeat Simple_repeat 1 57 0 5 706 193 236 52 52 chr13 15939092 15939150 -104345162 + MIRb SINE MIR 14 71 -197 5 706 427 305 163 36 chr13 15939365 15939617 -104344695 - MLT2D LTR ERVL -51 363 80 5 706 1050 191 71 0 chr13 15939617 15939827 -104344485 - URR1B DNA MER1_type 0 225 1 5 706 1154 328 108 32 chr13 15942215 15942772 -104341540 + Arthur1 DNA Tip100 3 601 -3346 5 706 366 23 0 0 chr13 15944613 15944656 -104339656 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 706 491 0 17 0 chr13 15944661 15944720 -104339592 + (TTCTC)n Simple_repeat Simple_repeat 1 60 0 5 706 922 130 12 6 chr13 15944720 15944883 -104339429 + (TTTC)n Simple_repeat Simple_repeat 4 167 0 5 706 243 0 0 0 chr13 15944884 15944911 -104339401 + (CCTA)n Simple_repeat Simple_repeat 2 28 0 5 706 309 291 136 0 chr13 15945086 15945196 -104339116 - MLT1A1 LTR MaLR -279 129 5 5 706 333 47 0 0 chr13 15946022 15946065 -104338247 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 5 706 532 297 46 38 chr13 15946409 15946647 -104337665 + MER121 Unknown Unknown 81 320 -92 5 706 2943 116 69 0 chr13 15946856 15947321 -104336991 + L1_Mus3 LINE L1 6141 6637 -1 5 706 522 0 0 0 chr13 15947357 15947415 -104336897 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 5 706 534 93 0 0 chr13 15949170 15949256 -104335056 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 706 304 308 143 39 chr13 15949348 15949551 -104334761 - L1MC LINE L1 -2067 4079 3856 5 706 3325 59 5 0 chr13 15949595 15950020 -104334292 + L1_Mus2 LINE L1 6140 6566 0 5 706 405 0 0 0 chr13 15950042 15950087 -104334225 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 706 315 0 0 0 chr13 15950087 15950121 -104334191 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 706 233 150 25 0 chr13 15950421 15950461 -104333851 - MLT1J LTR MaLR -332 180 140 5 706 293 225 28 0 chr13 15950772 15950843 -104333469 - PB1D10 SINE Alu -3 114 42 5 706 245 183 17 0 chr13 15951042 15951102 -104333210 + CT-rich Low_complexity Low_complexity 2 62 0 5 706 898 101 6 45 chr13 15952196 15952373 -104331939 - RMER17B LTR ERVK -483 475 306 5 706 3971 165 161 1 chr13 15952438 15953240 -104331072 + RMER17B LTR ERVK 2 931 -27 5 706 3743 86 4 4 chr13 15953272 15953774 -104330538 + L1_Mus3 LINE L1 6128 6629 -9 5 706 243 266 10 186 chr13 15954031 15954128 -104330184 - MER81 DNA AcHobo -34 80 1 5 706 231 311 68 58 chr13 15955423 15955614 -104328698 + L2b LINE L2 2823 3015 -404 5 706 560 260 56 103 chr13 15956130 15956344 -104327968 + MER20 DNA MER1_type 11 214 -5 6 706 294 333 129 8 chr13 15956387 15956511 -104327801 + L2b LINE L2 3238 3425 -1 5 706 1260 291 31 22 chr13 15958100 15958557 -104325755 + Lx8 LINE L1 7013 7473 0 6 706 727 272 43 40 chr13 15959021 15959297 -104325015 + MER121 Unknown Unknown 9 285 -127 6 706 21 0 0 0 chr13 15960026 15960047 -104324265 + AT_rich Low_complexity Low_complexity 1 21 0 6 706 396 0 0 0 chr13 15961546 15961590 -104322722 + (CAGA)n Simple_repeat Simple_repeat 2 45 0 6 706 310 259 49 0 chr13 15961594 15961675 -104322637 + HAL1-3A_ME LINE L1 1976 2060 -798 6 706 233 192 39 0 chr13 15962404 15962482 -104321830 + T-rich Low_complexity Low_complexity 2 82 0 6 706 25 95 0 0 chr13 15962565 15962639 -104321673 + AT_rich Low_complexity Low_complexity 1 74 0 6 706 523 81 23 0 chr13 15962791 15962877 -104321435 + (TCTA)n Simple_repeat Simple_repeat 2 89 0 6 706 742 187 0 0 chr13 15962877 15963000 -104321312 - B1_Mus2 SINE Alu -2 145 23 6 706 388 174 0 140 chr13 15962919 15963019 -104321293 - MT2B LTR ERVL -343 258 173 6 706 257 311 18 70 chr13 15963032 15963146 -104321166 + MLT1C LTR MaLR 289 396 -71 6 706 715 314 33 0 chr13 15964694 15964965 -104319347 - Lx8 LINE L1 -451 7022 6743 6 706 2261 247 148 49 chr13 15964975 15965746 -104318566 + RMER13A LTR ERVK 12 858 -2 6 706 1246 294 55 5 chr13 15965747 15966151 -104318161 - Lx8 LINE L1 -723 6750 6327 6 706 2120 296 23 23 chr13 15966155 15967063 -104317249 - L1_Mur3 LINE L1 -533 5347 4440 6 706 639 286 79 61 chr13 15967076 15967252 -104317060 - L1_Mur3 LINE L1 -3785 2095 1930 6 706 964 152 176 10 chr13 15967252 15967445 -104316867 + URR1B DNA MER1_type 1 225 0 6 706 721 250 102 13 chr13 15967445 15967823 -104316489 - L1_Mur3 LINE L1 -3951 1929 1531 6 706 384 22 0 0 chr13 15968335 15968380 -104315932 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 706 1824 205 87 0 chr13 15968380 15968760 -104315552 - MTC LTR MaLR -6 415 3 6 706 5472 187 67 31 chr13 15968762 15969196 -104315116 - MTC-int LTR MaLR 0 1258 830 6 706 369 0 0 0 chr13 15969196 15969237 -104315075 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 706 5472 187 67 31 chr13 15969237 15969975 -104314337 - MTC-int LTR MaLR -429 829 45 6 706 2795 261 99 14 chr13 15969975 15970923 -104313389 + MERVL_2A-int LTR ERVL 1675 2703 -3058 6 706 38 0 0 0 chr13 15972367 15972405 -104311907 + AT_rich Low_complexity Low_complexity 1 38 0 6 706 1214 48 0 0 chr13 15972405 15972551 -104311761 - B1_Mm SINE Alu 0 147 2 6 706 21 36 0 0 chr13 15974845 15974873 -104309439 + AT_rich Low_complexity Low_complexity 1 28 0 6 706 2795 16 3 6 chr13 15975078 15975401 -104308911 + RLTRETN_Mm LTR ERVK 1 322 0 6 706 12359 144 30 18 chr13 15975659 15978024 -104306288 + Lx2 LINE L1 2907 5301 -576 6 706 396 283 117 12 chr13 15978185 15978432 -104305880 - L1MC4a LINE L1 -22 7860 7588 6 706 808 203 81 26 chr13 15978496 15978769 -104305543 - L1MC4a LINE L1 -538 7344 7057 6 706 6652 56 1 1 chr13 15978969 15980349 -104303963 + L1Md_F2 LINE L1 389 1768 -4115 6 706 8448 65 6 0 chr13 15980346 15981486 -104302826 + L1Md_F2 LINE L1 4439 5585 -298 6 706 8216 46 1 0 chr13 15981487 15982482 -104301830 + L1Md_F2 LINE L1 5587 6582 0 6 706 5992 145 37 3 chr13 15982663 15983983 -104300329 + Lx2 LINE L1 5288 6646 -351 6 706 1212 163 9 0 chr13 15983980 15984195 -104300117 + Lx2 LINE L1 6775 6991 -6 6 706 585 272 90 20 chr13 15984252 15984496 -104299816 + Lx8 LINE L1 7135 7395 -78 6 706 8991 152 4 7 chr13 15984614 15986276 -104298036 - Lx2 LINE L1 -1335 4542 2886 6 706 6259 188 22 7 chr13 15986261 15987074 -104297238 + Lx2 LINE L1 4528 5335 -542 6 706 3084 116 48 22 chr13 15987074 15987578 -104296734 + Lx LINE L1 6138 6654 0 6 706 8384 140 22 3 chr13 15987578 15989185 -104295127 + Lx2 LINE L1 5336 6997 0 6 706 300 133 29 58 chr13 15989394 15989498 -104294814 + (CATA)n Simple_repeat Simple_repeat 3 103 0 6 706 226 282 90 0 chr13 15989660 15989738 -104294574 + RMER5 LTR ERV1 65 149 -385 6 706 397 278 64 23 chr13 15990183 15990356 -104293956 + L1MB1 LINE L1 5650 5829 -360 6 88 341 296 58 39 chr13 15990648 15990855 -104293457 + L1MC LINE L1 3754 3964 -2182 6 707 337 251 131 15 chr13 15990871 15991069 -104293243 + L1MC LINE L1 4048 4268 -1878 6 707 1797 303 27 43 chr13 15991205 15991944 -104292368 + Lx8 LINE L1 6600 7326 -147 6 707 3353 40 2 0 chr13 15991962 15992357 -104291955 + MTA_Mm LTR MaLR 1 396 0 6 707 314 299 30 67 chr13 15992496 15992661 -104291651 + L1MC LINE L1 4436 4594 -1552 6 707 502 267 6 96 chr13 15993009 15993187 -104291125 - RSINE1 SINE B4 0 165 4 6 707 207 0 0 0 chr13 15993288 15993311 -104291001 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 6 707 252 143 0 0 chr13 15994343 15994385 -104289927 + (A)n Simple_repeat Simple_repeat 1 42 0 6 707 1038 80 12 12 chr13 15994387 15994551 -104289761 + (TTC)n Simple_repeat Simple_repeat 2 165 0 6 707 1253 43 12 0 chr13 15994616 15994779 -104289533 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 6 707 1828 286 123 51 chr13 15995069 15996251 -104288061 - Lx9 LINE L1 -20 7624 6358 6 707 29 28 0 0 chr13 15996253 15996289 -104288023 + AT_rich Low_complexity Low_complexity 1 36 0 6 707 2440 247 50 113 chr13 15996466 15997176 -104287136 - Lx9 LINE L1 -1677 5967 5215 6 707 831 48 0 0 chr13 15997176 15997280 -104287032 + (TC)n Simple_repeat Simple_repeat 1 104 0 6 707 2440 242 52 127 chr13 15997280 15997416 -104286896 - Lx9 LINE L1 -633 5214 5177 6 707 338 0 24 0 chr13 15997416 15997458 -104286854 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 707 2440 242 52 127 chr13 15997458 15998018 -104286294 - Lx9 LINE L1 -671 5176 4623 6 707 744 295 10 21 chr13 16000091 16000285 -104284027 - B3A SINE B2 -5 193 2 1 707 404 37 19 0 chr13 16000394 16000448 -104283864 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 707 219 69 0 0 chr13 16000448 16000477 -104283835 + (TATATG)n Simple_repeat Simple_repeat 3 31 0 3 707 1184 283 190 32 chr13 16000478 16001348 -104282964 - Lx9 LINE L1 -222 7422 6416 4 707 22 56 0 0 chr13 16001389 16001425 -104282887 + AT_rich Low_complexity Low_complexity 1 36 0 5 707 449 247 45 70 chr13 16001598 16001781 -104282531 - Lx9 LINE L1 -1685 5959 5773 4 707 398 305 139 51 chr13 16001825 16002119 -104282193 - MLT1C LTR MaLR -143 324 5 6 707 306 321 14 7 chr13 16002339 16002480 -104281832 + HERV16-int LTR ERVL 313 454 -4542 7 707 573 329 93 16 chr13 16002765 16003012 -104281300 + MTD LTR MaLR 5 270 -149 8 707 554 233 74 126 chr13 16003046 16003277 -104281035 + MTE2a LTR MaLR 161 379 0 9 707 7663 51 0 7 chr13 16003486 16004871 -104279441 - L1Md_F2 LINE L1 -12 6570 5195 1 707 408 20 0 0 chr13 16004875 16004924 -104279388 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 707 3150 45 0 0 chr13 16005024 16005406 -104278906 - L1Md_T LINE L1 0 6582 6201 1 707 25 0 0 0 chr13 16005585 16005610 -104278702 + AT_rich Low_complexity Low_complexity 1 25 0 1 707 312 27 0 0 chr13 16005669 16005706 -104278606 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 707 1480 214 10 3 chr13 16005720 16006015 -104278297 - ORR1B2-int LTR MaLR -1212 297 1 1 707 2007 149 25 8 chr13 16006020 16006379 -104277933 - ORR1B2 LTR MaLR -2 365 1 1 707 966 322 105 26 chr13 16007836 16008016 -104276296 + MER82 DNA MER2_type 9 216 -437 1 707 195 100 0 0 chr13 16008016 16008046 -104276266 + (CATATA)n Simple_repeat Simple_repeat 3 32 0 1 707 966 322 105 26 chr13 16008046 16008074 -104276238 + MER82 DNA MER2_type 217 259 -394 1 707 201 74 0 0 chr13 16008074 16008101 -104276211 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 707 414 0 0 0 chr13 16008104 16008150 -104276162 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 1 707 966 322 105 26 chr13 16008150 16008169 -104276143 + MER82 DNA MER2_type 260 276 -377 1 707 477 0 0 0 chr13 16008169 16008222 -104276090 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 707 966 322 105 26 chr13 16008222 16008530 -104275782 + MER82 DNA MER2_type 277 587 -66 1 707 21 36 0 0 chr13 16009881 16009909 -104274403 + AT_rich Low_complexity Low_complexity 1 28 0 2 707 818 200 11 11 chr13 16009979 16010156 -104274156 + B2_Mm2 SINE B2 1 177 -18 2 707 264 149 0 0 chr13 16010507 16010554 -104273758 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 707 320 289 15 15 chr13 16010767 16010924 -104273388 - Lx8 LINE L1 -373 5927 5781 2 707 632 276 46 75 chr13 16011631 16011832 -104272480 - Lx8 LINE L1 -816 5327 5125 2 707 1145 75 0 0 chr13 16011832 16011978 -104272334 - B1_Mus2 SINE Alu 0 147 2 2 707 632 276 46 75 chr13 16011978 16012125 -104272187 - Lx8 LINE L1 -1019 5124 4989 2 707 474 18 0 0 chr13 16012182 16012237 -104272075 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 2 707 5382 57 5 1 chr13 16012467 16013140 -104271172 - L1_Mus1 LINE L1 0 6567 5893 2 707 1113 272 94 22 chr13 16013141 16013728 -104270584 - Lx8 LINE L1 -1142 5001 4373 2 707 1768 90 0 15 chr13 16015244 16015503 -104268809 + L1Md_F2 LINE L1 6327 6581 -1 2 707 234 74 18 36 chr13 16015944 16016000 -104268312 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 2 707 444 230 144 48 chr13 16016297 16016443 -104267869 - MER5A1 DNA MER1_type -1 165 6 3 707 241 281 16 0 chr13 16016771 16016835 -104267477 - ID4 SINE ID -15 68 4 3 707 1869 157 42 28 chr13 16017072 16017426 -104266886 + RLTR15 LTR ERVK 1 359 0 3 707 444 335 112 54 chr13 16017449 16017780 -104266532 - ORR1E LTR MaLR -2 357 8 3 707 312 274 64 8 chr13 16017796 16017921 -104266391 + L1MA5 LINE L1 5875 6006 -294 3 707 300 257 44 9 chr13 16017945 16018059 -104266253 + L1MA5 LINE L1 6065 6182 -118 3 707 846 273 21 8 chr13 16018061 16018301 -104266011 + Lx8 LINE L1 6356 6598 -875 3 707 2821 65 7 0 chr13 16018299 16018983 -104265329 - L1Md_Gf LINE L1 -4272 1614 829 3 707 1427 50 0 0 chr13 16018973 16019152 -104265160 + L1Md_F2 LINE L1 5408 5586 -297 3 707 8287 41 0 2 chr13 16019152 16020150 -104264162 + L1Md_F2 LINE L1 5587 6582 0 3 707 724 322 20 82 chr13 16020151 16020506 -104263806 + Lx8 LINE L1 6587 6919 -554 3 707 627 221 0 78 chr13 16020517 16020684 -104263628 + Lx8 LINE L1 6989 7142 -331 3 707 226 275 35 52 chr13 16020752 16020867 -104263445 + L1MA5 LINE L1 6175 6287 -10 3 707 258 276 73 37 chr13 16020869 16020978 -104263334 - MER5A1 DNA MER1_type -49 117 5 3 707 21 0 0 0 chr13 16021032 16021053 -104263259 + AT_rich Low_complexity Low_complexity 1 21 0 3 707 465 19 0 0 chr13 16022144 16022198 -104262114 + (TC)n Simple_repeat Simple_repeat 2 55 0 4 707 29 0 0 0 chr13 16022713 16022742 -104261570 + AT_rich Low_complexity Low_complexity 1 29 0 4 707 691 12 0 0 chr13 16022777 16022863 -104261449 - L1Md_T LINE L1 0 6582 6497 4 707 1690 206 18 17 chr13 16022865 16023303 -104261009 + RLTR20B1 LTR ERVK 5 560 0 4 707 770 274 142 70 chr13 16023743 16024202 -104260110 - RMER13A LTR ERVK -368 492 1 4 707 369 0 0 0 chr13 16024424 16024465 -104259847 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 707 180 0 0 0 chr13 16024465 16024484 -104259828 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 707 461 374 51 11 chr13 16024490 16024844 -104259468 - Lx8 LINE L1 -132 7341 6974 4 707 429 206 0 0 chr13 16024863 16024955 -104259357 + (TA)n Simple_repeat Simple_repeat 2 93 0 4 707 1639 311 38 52 chr13 16024955 16025819 -104258493 - Lx8 LINE L1 -521 6952 6101 4 707 324 0 0 0 chr13 16025954 16025990 -104258322 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 707 423 0 0 0 chr13 16026647 16026694 -104257618 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 5 707 180 0 0 0 chr13 16027347 16027367 -104256945 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 5 707 1615 200 14 54 chr13 16028360 16028381 -104255931 + MTC LTR MaLR 61 80 -341 5 707 8102 110 20 0 chr13 16028381 16029571 -104254741 + Lx2 LINE L1 5784 6997 0 5 707 1615 200 14 54 chr13 16029571 16029903 -104254409 + MTC LTR MaLR 81 400 -21 5 707 520 299 90 29 chr13 16030088 16030367 -104253945 - Lx8 LINE L1 -25 7448 7153 5 707 1917 184 48 29 chr13 16030371 16031167 -104253145 + ORR1A3-int LTR MaLR 164 1012 -951 5 707 302 241 0 0 chr13 16031720 16031774 -104252538 - MER58A DNA MER1_type -145 79 26 5 707 328 279 89 44 chr13 16035333 16035468 -104248844 - B1F2 SINE Alu -5 144 4 5 707 204 242 15 15 chr13 16036655 16036722 -104247590 + (CACTC)n Simple_repeat Simple_repeat 3 69 0 5 707 571 288 67 32 chr13 16036773 16037056 -104247256 - Lx8 LINE L1 -232 7241 6949 5 707 369 0 0 0 chr13 16037237 16037278 -104247034 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 707 1777 323 65 29 chr13 16037511 16038377 -104245935 + Lx9 LINE L1 6521 7417 -227 6 707 378 0 0 0 chr13 16038379 16038421 -104245891 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 707 31 26 0 0 chr13 16038482 16038520 -104245792 + AT_rich Low_complexity Low_complexity 1 38 0 6 707 4599 47 26 7 chr13 16038520 16039100 -104245212 + L1Md_F2 LINE L1 5989 6579 -3 6 707 209 102 39 58 chr13 16039199 16039251 -104245061 + A-rich Low_complexity Low_complexity 6 56 0 6 707 312 325 12 0 chr13 16040370 16040453 -104243859 - B1F SINE Alu -61 88 5 6 707 214 358 46 54 chr13 16043377 16043507 -104240805 + MIRc SINE MIR 35 163 -105 6 707 211 261 0 0 chr13 16043547 16043593 -104240719 + ID4_ SINE ID 38 83 0 6 707 180 254 0 0 chr13 16043600 16043659 -104240653 + GA-rich Low_complexity Low_complexity 1 59 0 6 707 330 279 54 72 chr13 16043660 16043826 -104240486 + HAL1-3A_ME LINE L1 2282 2444 -414 7 707 203 250 36 0 chr13 16043826 16043882 -104240430 + GA-rich Low_complexity Low_complexity 3 60 0 7 707 351 0 0 0 chr13 16044225 16044264 -104240048 + (T)n Simple_repeat Simple_repeat 1 39 0 7 707 800 282 202 40 chr13 16045926 16046560 -104237752 + L1MC1 LINE L1 5120 5865 -468 7 707 513 311 185 23 chr13 16046560 16047031 -104237281 - MER44B DNA MER2_type -1 549 3 7 707 800 293 117 29 chr13 16047031 16047097 -104237215 + L1MC1 LINE L1 5866 5928 -405 7 707 8912 35 0 0 chr13 16047198 16048291 -104236021 + MTA_Mm-int LTR MaLR 6 1098 0 7 707 3463 28 2 0 chr13 16048291 16048686 -104235626 + MTA_Mm LTR MaLR 1 396 0 7 707 237 333 0 20 chr13 16048724 16048825 -104235487 + Lx9 LINE L1 7368 7466 -178 7 707 982 302 63 20 chr13 16048844 16049239 -104235073 - MTE-int LTR MaLR -1110 470 59 7 707 1057 257 58 8 chr13 16049249 16049608 -104234704 - MTD LTR MaLR -14 405 14 7 707 283 216 118 54 chr13 16049547 16049640 -104234672 + MTEb LTR MaLR 255 353 -26 7 707 41 21 0 0 chr13 16049686 16049734 -104234578 + AT_rich Low_complexity Low_complexity 1 48 0 8 707 227 221 12 61 chr13 16049776 16049858 -104234454 - Lx8 LINE L1 -5 7468 7391 8 707 224 245 38 0 chr13 16050617 16050670 -104233642 + PB1D9 SINE Alu 66 120 0 8 707 1160 304 73 29 chr13 16050686 16051483 -104232829 + L1MB7 LINE L1 5337 6168 -16 8 707 2224 119 0 3 chr13 16051556 16051876 -104232436 + ORR1A2 LTR MaLR 1 319 -8 8 707 10886 130 56 14 chr13 16051880 16053764 -104230548 + ORR1A2-int LTR MaLR 1 1963 0 8 707 2177 133 6 0 chr13 16053765 16054089 -104230223 + ORR1A2 LTR MaLR 2 327 0 8 707 39931 26 1 6 chr13 16054553 16060941 -104223371 - L1Md_T LINE L1 0 6582 232 8 707 23 33 0 0 chr13 16061034 16061064 -104223248 + AT_rich Low_complexity Low_complexity 1 30 0 8 707 510 57 0 0 chr13 16061768 16061838 -104222474 + (CAG)n Simple_repeat Simple_repeat 3 72 0 8 707 754 149 57 0 chr13 16062417 16062558 -104221754 + Lx3B LINE L1 6821 6969 -4 8 707 439 313 44 77 chr13 16063476 16063793 -104220519 - MLT1A LTR MaLR -52 415 26 8 707 813 254 31 10 chr13 16063921 16064116 -104220196 + Lx7 LINE L1 7038 7236 -460 9 707 4365 68 2 2 chr13 16064135 16064663 -104219649 - L1_Mus1 LINE L1 -1 6566 6039 9 707 617 40 0 0 chr13 16064663 16064738 -104219574 + L1_Mus1 LINE L1 5995 6069 -498 9 707 493 242 24 40 chr13 16064738 16064863 -104219449 + Lx7 LINE L1 7223 7345 -351 9 707 23 33 0 0 chr13 16065019 16065049 -104219263 + AT_rich Low_complexity Low_complexity 1 30 0 9 707 1326 85 0 0 chr13 16065878 16066055 -104218257 - L1_Mus1 LINE L1 -610 5273 5097 9 707 7673 65 4 2 chr13 16066054 16067321 -104216991 + L1_Mus1 LINE L1 5295 6567 0 9 707 250 232 130 0 chr13 16067361 16067430 -104216882 + PB1D9 SINE Alu 43 120 0 9 707 229 196 0 0 chr13 16067456 16067502 -104216810 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 9 707 258 233 0 0 chr13 16067526 16067569 -104216743 - B1_Mur4 SINE Alu -105 45 3 9 707 239 140 23 23 chr13 16067540 16067584 -104216728 - MT2B2 LTR ERVL -297 287 244 9 707 476 102 0 22 chr13 16068009 16068099 -104216213 + (TCTCTG)n Simple_repeat Simple_repeat 3 90 0 9 707 1363 229 123 34 chr13 16068570 16069018 -104215294 - Lx9 LINE L1 -1017 6627 6140 9 707 1664 214 39 3 chr13 16069019 16069351 -104214961 + Lx9 LINE L1 6692 7035 -609 9 707 670 257 83 12 chr13 16070054 16070223 -104214089 - B3A SINE B2 -16 182 2 1 707 2893 72 0 0 chr13 16070474 16070848 -104213464 - L1_Mm LINE L1 -1375 4508 4135 1 707 2827 69 0 11 chr13 16070848 16071199 -104213113 + L1_Mus1 LINE L1 6220 6566 -1 1 707 342 0 0 0 chr13 16072235 16072273 -104212039 + (A)n Simple_repeat Simple_repeat 1 38 0 1 707 432 357 119 0 chr13 16073360 16073595 -104210717 + L2 LINE L2 2192 2454 -965 1 707 189 360 66 53 chr13 16073645 16074041 -104210271 + L2 LINE L2 2678 3078 -341 1 707 183 235 0 0 chr13 16074494 16074545 -104209767 + CT-rich Low_complexity Low_complexity 4 54 0 1 707 702 317 126 12 chr13 16074597 16074852 -104209460 - B4A SINE B4 -8 284 1 1 707 340 133 208 9 chr13 16075510 16075616 -104208696 + Lx9 LINE L1 7518 7644 0 1 707 261 0 0 0 chr13 16075730 16075759 -104208553 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 707 535 284 94 20 chr13 16076166 16076367 -104207945 + MLT1J LTR MaLR 28 243 -269 1 707 282 296 23 0 chr13 16079149 16079237 -104205075 + B3A SINE B2 74 163 -35 1 707 270 0 0 0 chr13 16079237 16079267 -104205045 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 707 546 16 0 0 chr13 16079267 16079329 -104204983 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 707 272 70 23 0 chr13 16079829 16079872 -104204440 + (CTAA)n Simple_repeat Simple_repeat 2 45 0 1 707 935 261 0 15 chr13 16080825 16081031 -104203281 + B3 SINE B2 14 216 0 1 707 408 262 107 0 chr13 16081470 16081573 -104202739 - B1_Mur4 SINE Alu -7 143 30 1 707 299 363 46 46 chr13 16081974 16082104 -104202208 - MLT1J LTR MaLR -160 352 223 1 707 263 28 0 27 chr13 16083035 16083072 -104201240 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1 707 454 326 108 69 chr13 16085714 16086179 -104198133 + RMER5 LTR ERV1 17 499 -35 1 707 233 119 24 0 chr13 16086578 16086620 -104197692 + (ATG)n Simple_repeat Simple_repeat 1 43 0 1 707 249 274 0 0 chr13 16087625 16087687 -104196625 + A-rich Low_complexity Low_complexity 1 62 0 1 707 697 92 0 0 chr13 16088164 16088262 -104196050 - ORR1A3 LTR MaLR -228 98 1 1 707 3842 57 0 0 chr13 16089058 16089529 -104194783 + L1Md_F2 LINE L1 5116 5586 -297 1 707 8243 63 3 10 chr13 16089530 16090531 -104193781 + L1Md_F2 LINE L1 5588 6581 -1 1 707 14496 83 10 6 chr13 16091089 16093207 -104191105 - L1VL2 LINE L1 -626 2989 850 1 707 718 184 38 6 chr13 16093207 16093366 -104190946 - Lx LINE L1 -3 6651 6488 1 707 5233 88 20 14 chr13 16093366 16093918 -104190394 - L1VL2 LINE L1 -5486 849 306 1 707 315 0 0 0 chr13 16094027 16094062 -104190250 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 707 254 308 28 37 chr13 16094173 16094281 -104190031 - MTEb LTR MaLR -5 374 268 1 707 1993 132 114 55 chr13 16094674 16095059 -104189253 + Lx4A LINE L1 6649 7056 -2 1 707 352 306 15 53 chr13 16095262 16095393 -104188919 + ID_B1 SINE B4 81 206 -18 1 707 333 0 0 0 chr13 16095833 16095870 -104188442 + (A)n Simple_repeat Simple_repeat 1 37 0 1 707 315 0 0 0 chr13 16095922 16095957 -104188355 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 707 566 282 86 27 chr13 16095987 16096173 -104188139 + B3A SINE B2 2 198 0 1 707 22 56 0 0 chr13 16096383 16096419 -104187893 + AT_rich Low_complexity Low_complexity 1 36 0 1 707 251 278 72 0 chr13 16097033 16097130 -104187182 + L1M5 LINE L1 5571 5674 -450 1 707 298 146 0 24 chr13 16097661 16097745 -104186567 + T-rich Low_complexity Low_complexity 2 83 0 1 707 283 298 12 23 chr13 16098511 16098597 -104185715 + ID_B1 SINE B4 81 165 -59 1 707 408 155 0 0 chr13 16098620 16098691 -104185621 + GA-rich Low_complexity Low_complexity 3 73 0 1 707 208 135 0 0 chr13 16100490 16100527 -104183785 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 707 180 0 0 0 chr13 16100527 16100547 -104183765 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 707 360 0 0 0 chr13 16100547 16100586 -104183726 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 707 461 266 129 0 chr13 16102092 16102231 -104182081 - MER20 DNA MER1_type -62 157 1 1 707 186 225 75 0 chr13 16104701 16104741 -104179571 - MIRc SINE MIR -120 148 106 1 707 342 0 0 0 chr13 16105566 16105604 -104178708 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 707 204 125 0 0 chr13 16107365 16107397 -104176915 + (A)n Simple_repeat Simple_repeat 1 32 0 1 707 246 156 0 0 chr13 16108272 16108317 -104175995 + GA-rich Low_complexity Low_complexity 4 48 0 1 707 858 157 11 6 chr13 16108557 16108736 -104175576 + CT-rich Low_complexity Low_complexity 1 180 0 1 707 313 311 146 15 chr13 16108740 16108877 -104175435 - HAL1-3A_ME LINE L1 -419 2439 2285 1 707 240 167 0 0 chr13 16116774 16116822 -104167490 + T-rich Low_complexity Low_complexity 1 48 0 1 707 514 316 131 27 chr13 16117667 16117927 -104166385 - MER58B DNA MER1_type -51 290 4 1 707 392 55 0 18 chr13 16118003 16118059 -104166253 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 707 186 331 35 63 chr13 16118581 16118723 -104165589 - L4 LINE RTE -844 1185 1048 1 707 217 89 22 22 chr13 16119093 16119139 -104165173 + (CAAAAA)n Simple_repeat Simple_repeat 6 51 0 1 707 1233 58 0 0 chr13 16119498 16119669 -104164643 + (CA)n Simple_repeat Simple_repeat 2 172 0 1 707 180 0 0 0 chr13 16120115 16120135 -104164177 + (TGGGGG)n Simple_repeat Simple_repeat 4 23 0 1 707 234 81 0 0 chr13 16120192 16120229 -104164083 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1 707 215 203 0 17 chr13 16120489 16120549 -104163763 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 1 708 21 0 0 0 chr13 16122865 16122886 -104161426 + AT_rich Low_complexity Low_complexity 1 21 0 1 708 364 261 26 195 chr13 16123844 16123926 -104160386 - MTE2a LTR MaLR -80 299 221 1 708 435 82 0 0 chr13 16123926 16123999 -104160313 + L1_Mus4 LINE L1 6564 6636 0 1 708 364 261 26 195 chr13 16123999 16124111 -104160201 - MTE2a LTR MaLR -159 220 138 1 708 234 188 0 20 chr13 16125096 16125145 -104159167 + A-rich Low_complexity Low_complexity 4 51 0 1 708 200 360 71 35 chr13 16126135 16126276 -104158036 + MIRc SINE MIR 3 148 -120 1 708 2185 135 6 0 chr13 16126428 16126753 -104157559 + ORR1A2 LTR MaLR 1 327 0 1 708 21 0 0 0 chr13 16126778 16126799 -104157513 + AT_rich Low_complexity Low_complexity 1 21 0 1 708 288 256 92 25 chr13 16126979 16127124 -104157188 - Lx9 LINE L1 -13 7631 7472 1 708 495 0 0 0 chr13 16127124 16127179 -104157133 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1 708 288 256 92 25 chr13 16127179 16127229 -104157083 - Lx9 LINE L1 -173 7471 7423 1 708 3680 240 92 40 chr13 16127321 16128512 -104155800 - Lx9 LINE L1 -235 7409 6157 1 708 27 0 0 0 chr13 16128683 16128710 -104155602 + AT_rich Low_complexity Low_complexity 1 27 0 1 708 942 244 5 0 chr13 16128710 16128915 -104155397 - B3 SINE B2 -9 207 2 1 708 1305 66 0 0 chr13 16129006 16129234 -104155078 + (TTC)n Simple_repeat Simple_repeat 1 228 0 1 708 9578 11 0 1 chr13 16130954 16132878 -104151434 - L1Md_T LINE L1 0 6582 4732 1 708 980 9 0 0 chr13 16132878 16132985 -104151327 - U6 snRNA snRNA 0 107 1 1 708 284 342 50 47 chr13 16133477 16133858 -104150454 + Lx8 LINE L1 7034 7538 -106 1 708 765 228 19 0 chr13 16134140 16134302 -104150010 + ORR1C2 LTR MaLR 219 383 -1 1 708 1441 260 13 69 chr13 16134566 16135119 -104149193 + L1_Mur3 LINE L1 4747 5268 -612 1 708 2449 166 6 59 chr13 16135716 16136691 -104147621 + L1VL4 LINE L1 803 1699 -2215 1 708 3022 122 39 12 chr13 16136661 16137225 -104147087 + L1VL4 LINE L1 3242 3820 -2066 1 708 542 168 133 0 chr13 16137220 16137363 -104146949 + Lx3C LINE L1 6813 6974 -2 1 708 840 200 0 0 chr13 16138140 16138315 -104145997 + GA-rich Low_complexity Low_complexity 4 178 0 1 708 677 298 94 63 chr13 16138323 16139054 -104145258 + L1_Mur3 LINE L1 4373 5141 -739 1 708 396 0 0 0 chr13 16139054 16139098 -104145214 + (TCTA)n Simple_repeat Simple_repeat 1 44 0 1 708 677 298 94 63 chr13 16139098 16139305 -104145007 + L1_Mur3 LINE L1 5142 5346 -534 1 708 180 0 0 0 chr13 16139305 16139325 -104144987 + (CAAAC)n Simple_repeat Simple_repeat 5 24 0 1 708 677 298 94 63 chr13 16139325 16139490 -104144822 + L1_Mur3 LINE L1 5347 5511 -369 1 708 390 61 0 0 chr13 16139484 16139533 -104144779 + L1_Mur2 LINE L1 3763 3811 -2066 1 708 249 193 70 0 chr13 16139528 16139585 -104144727 + Lx3B LINE L1 6813 6873 -100 1 708 3109 43 15 2 chr13 16139588 16139982 -104144330 + L1Md_F2 LINE L1 6184 6582 0 1 708 2300 281 85 27 chr13 16140135 16140978 -104143334 + Lx8 LINE L1 6214 7105 -368 1 708 438 260 9 46 chr13 16141330 16141439 -104142873 - PB1D10 SINE Alu -1 116 12 1 708 484 33 0 0 chr13 16141704 16141764 -104142548 - L1Md_F2 LINE L1 -572 6010 5951 1 708 4483 32 8 0 chr13 16141764 16142293 -104142019 + L1Md_F2 LINE L1 6033 6565 -17 1 708 711 288 61 0 chr13 16143894 16144106 -104140206 + Tigger13a DNA MER2_type 541 765 -6 1 708 337 309 70 18 chr13 16144731 16144958 -104139354 - L1MDa LINE L1 -1979 4558 4320 1 708 272 300 77 21 chr13 16144985 16145128 -104139184 - L1MDa LINE L1 -5462 1171 1021 1 708 622 247 109 30 chr13 16146345 16146615 -104137697 - ORR1D1 LTR MaLR 0 421 130 1 708 1365 96 0 5 chr13 16146622 16146810 -104137502 - L1_Mus2 LINE L1 -4 6562 6376 1 708 1732 81 4 21 chr13 16146822 16147063 -104137249 - L1_Mus1 LINE L1 0 6567 6331 1 708 1706 76 0 0 chr13 16147063 16147288 -104137024 + L1_Mus1 LINE L1 6087 6311 -256 1 708 1423 228 50 63 chr13 16147288 16147686 -104136626 - MTD-int LTR MaLR -865 393 1 1 708 1328 245 75 45 chr13 16147686 16148110 -104136202 - MTD LTR MaLR 0 421 8 1 708 7419 88 2 3 chr13 16148224 16149343 -104134969 - L1_Mus3 LINE L1 -1 6637 5519 1 708 3947 94 3 7 chr13 16149344 16149933 -104134379 + L1_Mus3 LINE L1 5000 5586 -297 1 708 8189 31 17 0 chr13 16149933 16150899 -104133413 + L1Md_F2 LINE L1 5587 6568 -14 1 708 776 196 26 26 chr13 16150913 16151109 -104133203 - ORR1D1 LTR MaLR -191 187 8 1 708 1878 222 162 21 chr13 16151133 16152095 -104132217 - Lx9 LINE L1 -1114 6530 5345 1 708 301 333 20 34 chr13 16152129 16152278 -104132034 - L1_Rod LINE L1 -6932 240 94 1 708 216 0 0 0 chr13 16153366 16153390 -104130922 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 708 221 188 20 20 chr13 16154388 16154437 -104129875 + (TTG)n Simple_repeat Simple_repeat 2 50 0 1 708 647 232 111 40 chr13 16154607 16154805 -104129507 - B3 SINE B2 -1 215 4 1 708 419 338 47 40 chr13 16154866 16155458 -104128854 + L1_Rod LINE L1 1203 1798 -4049 1 708 369 306 86 14 chr13 16155712 16156060 -104128252 + L1MA4A LINE L1 4979 5351 -792 1 708 307 315 43 51 chr13 16156060 16156177 -104128135 + B4A SINE B4 33 148 -144 1 708 610 314 70 53 chr13 16156357 16156925 -104127387 + L1MA4A LINE L1 5352 5929 -374 1 708 9545 95 12 1 chr13 16157441 16157480 -104126832 - L1_Mur1 LINE L1 -2179 3707 3669 2 708 324 0 0 0 chr13 16157480 16157516 -104126796 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 708 9545 95 12 1 chr13 16157516 16158947 -104125365 - L1_Mur1 LINE L1 -2218 3668 2222 2 708 11944 87 15 12 chr13 16158941 16159846 -104124466 + L1_Mur1 LINE L1 3720 4637 -1249 2 708 191 36 36 0 chr13 16159846 16159874 -104124438 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 708 11944 87 15 12 chr13 16159874 16160790 -104123522 + L1_Mur1 LINE L1 4638 5545 -341 2 708 590 87 0 10 chr13 16160839 16160943 -104123369 + (TC)n Simple_repeat Simple_repeat 2 104 0 2 708 212 54 81 0 chr13 16160946 16160983 -104123329 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 2 708 192 77 0 0 chr13 16161291 16161317 -104122995 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 708 617 159 11 0 chr13 16161318 16161494 -104122818 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 2 708 1509 242 64 6 chr13 16162168 16162513 -104121799 + MTD LTR MaLR 24 388 -31 2 708 31 44 0 0 chr13 16163239 16163284 -104121028 + AT_rich Low_complexity Low_complexity 1 45 0 2 708 1825 282 40 19 chr13 16163284 16163959 -104120353 - Lx8 LINE L1 -8 7465 6777 2 708 919 283 49 18 chr13 16164061 16164389 -104119923 + Lx8 LINE L1 7059 7396 -77 2 708 206 160 60 0 chr13 16164442 16164492 -104119820 + A-rich Low_complexity Low_complexity 1 53 0 2 708 291 253 12 24 chr13 16167057 16167142 -104117170 + CT-rich Low_complexity Low_complexity 1 84 0 2 708 26 0 0 0 chr13 16169630 16169656 -104114656 + AT_rich Low_complexity Low_complexity 1 26 0 2 708 21 0 0 0 chr13 16170886 16170907 -104113405 + AT_rich Low_complexity Low_complexity 1 21 0 2 708 226 352 9 9 chr13 16171357 16171463 -104112849 + MLT1A1 LTR MaLR 303 408 0 2 708 182 367 20 20 chr13 16171938 16172038 -104112274 - MIRb SINE MIR -78 190 91 2 708 482 338 12 0 chr13 16172899 16173059 -104111253 + RSINE1 SINE B4 1 162 -3 2 708 200 194 0 0 chr13 16173076 16173112 -104111200 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 708 684 257 84 0 chr13 16173657 16173836 -104110476 - B3 SINE B2 0 216 23 2 708 1816 241 95 99 chr13 16174162 16175089 -104109223 - RMER17B LTR ERVK -34 924 2 2 708 24393 158 16 24 chr13 16175195 16180898 -104103414 + Lx LINE L1 369 6010 -644 2 708 333 357 48 26 chr13 16181004 16181234 -104103078 - L2a LINE L2 0 3426 3137 2 708 969 271 115 33 chr13 16181276 16181817 -104102495 + L1MB7 LINE L1 5584 6168 -16 2 708 204 125 0 0 chr13 16182371 16182403 -104101909 + (TTAA)n Simple_repeat Simple_repeat 3 34 0 2 708 484 325 19 0 chr13 16182414 16182574 -104101738 - RSINE1 SINE B4 0 165 3 2 708 622 242 4 13 chr13 16184254 16184493 -104099819 + G-rich Low_complexity Low_complexity 1 236 0 2 708 246 62 0 0 chr13 16184758 16184790 -104099522 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2 708 2945 85 10 7 chr13 16185001 16185406 -104098906 + Lx3_Mus LINE L1 6563 6968 -41 2 708 905 234 99 35 chr13 16186215 16186529 -104097783 - Charlie1a DNA MER1_type -21 1434 1101 2 708 270 193 47 6 chr13 16186907 16187079 -104097233 + (TA)n Simple_repeat Simple_repeat 1 179 0 2 708 354 226 28 39 chr13 16187135 16187315 -104096997 + (TTATA)n Simple_repeat Simple_repeat 3 180 0 2 708 1360 136 0 0 chr13 16188141 16188340 -104095972 + L1_Mm LINE L1 5479 5677 -206 2 708 3973 161 6 1 chr13 16188357 16189065 -104095247 - L1_Mm LINE L1 -405 5478 4768 2 708 4240 164 102 49 chr13 16189234 16190210 -104094102 + RLTR25B LTR ERVK 1 1028 0 2 708 1077 83 107 6 chr13 16190457 16190626 -104093686 - MTA_Mm LTR MaLR -210 186 1 2 708 1543 60 0 5 chr13 16190626 16190845 -104093467 - MTA_Mm-int LTR MaLR 0 1098 881 2 708 1688 143 2 3 chr13 16190845 16191134 -104093178 - RLTR1B LTR ERV1 0 624 225 2 708 1522 166 70 51 chr13 16191134 16191949 -104092363 - MuRRS4-int LTR ERV1 -2919 2144 783 2 708 690 255 32 96 chr13 16192185 16192467 -104091845 - MuRRS4-int LTR ERV1 -2522 777 514 2 708 970 222 87 50 chr13 16192793 16193216 -104091096 - MuRRS4-int LTR ERV1 -6933 623 202 2 708 708 103 0 121 chr13 16193235 16193367 -104090945 - MuRRS4-int LTR ERV1 -3183 116 1 2 708 3306 95 32 62 chr13 16193367 16193895 -104090417 - RLTR1B LTR ERV1 0 512 1 2 708 2215 128 112 8 chr13 16193900 16194302 -104090010 - MT-int LTR MaLR -229 869 426 2 708 323 309 55 41 chr13 16195068 16195213 -104089099 + MER20 DNA MER1_type 66 212 -7 2 708 463 219 66 59 chr13 16195259 16195395 -104088917 - MTE2b LTR MaLR 0 379 243 2 708 1277 61 241 0 chr13 16195395 16195623 -104088689 + RLTR47_MM LTR ERV1 1 283 -249 2 708 813 224 22 8 chr13 16195640 16195809 -104088503 - MTE2b LTR MaLR -215 204 1 2 708 22 0 0 0 chr13 16196744 16196766 -104087546 + AT_rich Low_complexity Low_complexity 1 22 0 2 708 594 226 6 19 chr13 16197066 16197224 -104087088 + MER63D DNA AcHobo 48 203 -858 2 708 1093 305 137 49 chr13 16197466 16197743 -104086569 - Lx8 LINE L1 -986 6487 6205 2 708 333 0 0 0 chr13 16197743 16197780 -104086532 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 708 1093 292 121 100 chr13 16197780 16198176 -104086136 - Lx8 LINE L1 -1269 6204 5782 2 708 683 157 93 36 chr13 16198176 16198315 -104085997 - B1_Mur3 SINE Alu 0 149 3 2 708 718 292 121 100 chr13 16198315 16198361 -104085951 - Lx8 LINE L1 -1907 5789 5750 2 708 621 40 0 0 chr13 16198361 16198437 -104085875 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 708 718 292 121 100 chr13 16198437 16198489 -104085823 - Lx8 LINE L1 -1947 5749 5700 2 708 668 301 57 159 chr13 16198476 16199068 -104085244 + Lx8 LINE L1 6655 7186 -287 2 708 266 262 0 8 chr13 16199291 16199414 -104084898 + (TA)n Simple_repeat Simple_repeat 2 123 0 2 708 6687 82 27 2 chr13 16199484 16200407 -104083905 - L1_Mus3 LINE L1 -12 6626 5681 2 708 608 325 158 54 chr13 16200667 16200983 -104083329 + MLT1A LTR MaLR 26 374 0 2 708 299 212 0 12 chr13 16201400 16201486 -104082826 + (TATATG)n Simple_repeat Simple_repeat 5 89 0 2 708 444 135 0 0 chr13 16203236 16203310 -104081002 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 708 249 275 100 92 chr13 16204532 16204652 -104079660 + MER20 DNA MER1_type 2 122 -97 2 708 198 0 0 0 chr13 16204675 16204697 -104079615 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 708 23 0 0 0 chr13 16204911 16204934 -104079378 + AT_rich Low_complexity Low_complexity 1 23 0 2 708 600 299 81 25 chr13 16204967 16205324 -104078988 - Lx9 LINE L1 -26 7618 7242 2 708 186 189 0 0 chr13 16207752 16207789 -104076523 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2 708 517 305 80 0 chr13 16207802 16207953 -104076359 - RSINE1 SINE B4 0 165 3 2 708 40 49 0 0 chr13 16209099 16209160 -104075152 + AT_rich Low_complexity Low_complexity 1 61 0 2 708 198 0 0 0 chr13 16209187 16209209 -104075103 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 708 193 304 33 42 chr13 16210251 16210371 -104073941 + L2a LINE L2 3201 3319 -107 2 708 206 118 0 0 chr13 16211780 16211814 -104072498 + (T)n Simple_repeat Simple_repeat 1 34 0 2 708 306 293 151 29 chr13 16211814 16211986 -104072326 - L1MC4a LINE L1 -670 7212 7020 2 708 3117 81 0 17 chr13 16212181 16212595 -104071717 + MTB_Mm LTR MaLR 1 407 0 2 708 715 139 0 0 chr13 16212674 16212782 -104071530 - B2_Mm2 SINE B2 -87 108 1 2 708 1544 149 181 6 chr13 16212859 16213184 -104071128 - Lx4B LINE L1 -1 7057 6676 2 708 1820 68 26 29 chr13 16213438 16213710 -104070602 + L1_Mus4 LINE L1 6360 6630 -6 2 708 379 260 0 58 chr13 16214300 16214439 -104069873 - Lx7 LINE L1 -3 7693 7563 2 708 4414 186 37 50 chr13 16214434 16215435 -104068877 + L1_Mur3 LINE L1 4407 5394 -486 2 708 506 43 14 0 chr13 16215471 16215540 -104068772 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 708 839 292 60 51 chr13 16215697 16216011 -104068301 - Lx9 LINE L1 -527 7117 6801 2 708 858 257 69 47 chr13 16216013 16216287 -104068025 - ORR1D2 LTR MaLR -87 283 4 2 708 536 288 72 22 chr13 16216293 16216474 -104067838 - Lx9 LINE L1 -1027 6617 6307 2 708 810 319 35 70 chr13 16216953 16217202 -104067110 + MLT1D LTR MaLR 148 382 -123 2 708 387 0 0 0 chr13 16217202 16217245 -104067067 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2 708 810 319 35 70 chr13 16217245 16217366 -104066946 + MLT1D LTR MaLR 383 504 -1 2 708 325 300 30 23 chr13 16217503 16217636 -104066676 + L3 LINE CR1 2349 2482 -2007 2 708 757 294 22 47 chr13 16217652 16217930 -104066382 + L3 LINE CR1 3568 3838 -651 2 708 231 372 99 16 chr13 16218181 16218372 -104065940 + L3 LINE CR1 4200 4406 -83 2 708 426 310 45 34 chr13 16219373 16219550 -104064762 + MLT2C2 LTR ERVL 1 179 -285 2 708 1254 109 0 16 chr13 16220545 16220732 -104063580 - B2_Mm2 SINE B2 -9 186 3 2 708 316 365 105 29 chr13 16220880 16221089 -104063223 - MIR SINE MIR -20 242 18 2 708 262 178 27 27 chr13 16221601 16221676 -104062636 + (CATA)n Simple_repeat Simple_repeat 2 76 0 2 708 4052 234 34 11 chr13 16222168 16223040 -104061272 + Lx7 LINE L1 6208 7099 -597 2 708 23 0 0 0 chr13 16223612 16223635 -104060677 + AT_rich Low_complexity Low_complexity 1 23 0 2 708 688 281 48 66 chr13 16223902 16224191 -104060121 - MTEb LTR MaLR -95 284 1 2 708 1145 86 7 0 chr13 16224328 16224480 -104059832 + B2_Mm2 SINE B2 2 154 -41 2 708 204 40 0 0 chr13 16224481 16224506 -104059806 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 2 708 450 211 0 0 chr13 16224709 16224813 -104059499 + (TG)n Simple_repeat Simple_repeat 1 104 0 2 708 527 278 48 20 chr13 16224813 16224960 -104059352 - RSINE1 SINE B4 0 165 15 2 708 30889 87 22 8 chr13 16225061 16230223 -104054089 + L1Md_F2 LINE L1 353 5585 -298 2 708 7147 93 1 7 chr13 16230225 16231225 -104053087 + L1Md_F2 LINE L1 5588 6581 -1 2 708 24 0 0 0 chr13 16231368 16231392 -104052920 + AT_rich Low_complexity Low_complexity 1 24 0 2 708 783 244 58 8 chr13 16231444 16231717 -104052595 - Lx2B LINE L1 -700 6273 5985 2 708 411 310 57 48 chr13 16232123 16232333 -104051979 - MLT1F LTR MaLR -30 518 307 2 708 2769 65 0 32 chr13 16232506 16232886 -104051426 + L1_Mus1 LINE L1 6200 6567 0 2 708 978 221 14 37 chr13 16233161 16233377 -104050935 - B3 SINE B2 -5 211 1 2 708 903 306 93 70 chr13 16233659 16234317 -104049995 - L1M4 LINE L1 -1002 5144 4472 2 708 21 36 0 0 chr13 16235678 16235706 -104048606 + AT_rich Low_complexity Low_complexity 1 28 0 2 708 1260 252 16 38 chr13 16236008 16236322 -104047990 - MTD LTR MaLR -112 307 1 2 708 2613 241 185 40 chr13 16236382 16237420 -104046892 - MTD-int LTR MaLR -15 1243 56 2 708 988 276 103 30 chr13 16237467 16237825 -104046487 - MTD LTR MaLR -14 405 22 2 708 491 0 0 17 chr13 16237825 16237885 -104046427 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 2 708 758 80 28 21 chr13 16240580 16240721 -104043591 + (TCTA)n Simple_repeat Simple_repeat 1 142 0 2 708 315 0 0 0 chr13 16241500 16241535 -104042777 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 708 859 101 61 23 chr13 16241919 16242051 -104042261 + B1_Mm SINE Alu 1 137 -10 3 708 422 36 18 0 chr13 16242051 16242107 -104042205 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 3 708 605 86 0 11 chr13 16243858 16243952 -104040360 + (TTCC)n Simple_repeat Simple_repeat 2 94 0 3 708 223 289 224 0 chr13 16244028 16244104 -104040208 - RSINE1 SINE B4 -21 144 52 3 708 245 331 158 26 chr13 16244715 16244867 -104039445 - MLT1H2 LTR MaLR -26 463 292 3 708 414 0 0 0 chr13 16244930 16244976 -104039336 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 708 279 0 0 0 chr13 16244976 16245006 -104039306 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 708 676 237 169 0 chr13 16245589 16245766 -104038546 - B3 SINE B2 -9 207 1 3 708 180 0 0 0 chr13 16245879 16245899 -104038413 + (TTA)n Simple_repeat Simple_repeat 1 20 0 3 708 1964 79 11 4 chr13 16245902 16246181 -104038131 - L1_Mus3 LINE L1 -6 6632 6352 3 708 197 324 34 68 chr13 16246650 16246796 -104037516 + L3 LINE CR1 2220 2360 -2129 3 708 261 0 0 0 chr13 16246908 16246937 -104037375 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 708 24 0 0 0 chr13 16247374 16247398 -104036914 + AT_rich Low_complexity Low_complexity 1 24 0 3 708 240 238 0 0 chr13 16250682 16250745 -104033567 + CT-rich Low_complexity Low_complexity 3 65 0 3 708 8021 137 39 10 chr13 16250747 16252305 -104032007 - Lx3_Mus LINE L1 -23 6986 5382 3 708 13545 89 188 20 chr13 16252295 16252513 -104031799 - L1_Mur1 LINE L1 -67 5819 5610 3 708 2972 81 2 8 chr13 16252513 16252911 -104031401 + MTA_Mm LTR MaLR 1 396 0 3 88 13545 89 188 20 chr13 16252911 16255085 -104029227 - L1_Mur1 LINE L1 -277 5609 3025 3 709 1183 69 58 0 chr13 16255080 16255253 -104029059 + L1_Mur1 LINE L1 2857 3039 -2847 3 709 308 283 129 67 chr13 16255526 16255719 -104028593 + MER44A DNA MER2_type 24 228 -111 3 709 199 309 210 0 chr13 16256480 16256561 -104027751 + L2b LINE L2 3261 3358 -17 3 709 425 205 17 26 chr13 16258103 16258218 -104026094 + Lx7 LINE L1 7578 7691 -5 3 709 626 286 89 52 chr13 16258663 16259010 -104025302 - MLT1A0 LTR MaLR -2 363 4 3 709 484 176 22 0 chr13 16259310 16259401 -104024911 + ORR1C1 LTR MaLR 3 95 -283 3 709 1575 184 22 4 chr13 16259710 16259988 -104024324 - ORR1B2 LTR MaLR -13 354 72 3 709 1546 254 42 39 chr13 16260289 16260698 -104023614 + Lx7 LINE L1 7023 7432 -264 3 709 444 203 48 55 chr13 16260732 16260878 -104023434 + Lx6 LINE L1 7314 7458 -2 3 709 559 299 57 19 chr13 16260884 16261147 -104023165 + B4 SINE B4 1 273 -19 3 709 552 91 0 0 chr13 16261160 16261248 -104023064 + (CA)n Simple_repeat Simple_repeat 2 89 0 3 709 5398 29 3 18 chr13 16261310 16261974 -104022338 + L1Md_F3 LINE L1 5930 6583 -1 3 709 723 245 96 10 chr13 16262001 16262199 -104022113 - B3 SINE B2 -1 215 1 3 709 719 168 20 27 chr13 16262444 16262591 -104021721 - B1_Mur2 SINE Alu -2 147 2 3 709 640 299 100 48 chr13 16263247 16263577 -104020735 - MLT1A0 LTR MaLR -18 347 1 3 709 1125 82 0 0 chr13 16263724 16263871 -104020441 - B1_Mus1 SINE Alu 0 148 2 3 709 923 323 87 17 chr13 16263918 16264686 -104019626 - L1M3 LINE L1 -1197 4943 4122 3 709 227 337 23 0 chr13 16264689 16264775 -104019537 - Lx8 LINE L1 -534 6939 6852 3 709 1226 201 42 78 chr13 16264765 16265148 -104019164 + Lx8 LINE L1 5242 5610 -270 3 709 732 349 76 16 chr13 16265289 16265606 -104018706 - LTR53 LTR ERVL -134 385 50 3 709 750 191 87 0 chr13 16265607 16265780 -104018532 - URR1A DNA MER1_type -2 224 37 3 709 1746 290 120 16 chr13 16265894 16266794 -104017518 - Lx8 LINE L1 -10 7463 6471 3 709 775 218 30 0 chr13 16266789 16266954 -104017358 + Lx8 LINE L1 6274 6443 -1030 3 709 28 71 0 0 chr13 16268727 16268783 -104015529 + AT_rich Low_complexity Low_complexity 1 56 0 3 709 548 259 20 7 chr13 16268873 16269021 -104015291 - Lx9 LINE L1 -175 7469 7320 3 709 378 349 84 113 chr13 16269162 16269543 -104014769 - ORR1E LTR MaLR 0 370 1 3 709 323 179 0 0 chr13 16269630 16269686 -104014626 - L1_Rod LINE L1 -181 5666 5611 3 709 871 166 17 0 chr13 16269697 16269872 -104014440 + CT-rich Low_complexity Low_complexity 2 179 0 3 709 189 0 0 0 chr13 16269876 16269897 -104014415 + (TTTC)n Simple_repeat Simple_repeat 3 23 0 3 709 213 0 81 0 chr13 16270241 16270278 -104014034 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 3 709 812 92 37 124 chr13 16270284 16270445 -104013867 - B1_Mus2 SINE Alu 0 147 1 3 709 271 276 92 112 chr13 16270589 16270785 -104013527 - Charlie2b DNA MER1_type -2581 201 10 3 709 296 307 161 23 chr13 16271545 16271855 -104012457 + L1_Mur3 LINE L1 883 1235 -6477 3 709 793 287 4 18 chr13 16271864 16272137 -104012175 - L1_Mur3 LINE L1 -635 5245 4977 3 709 8172 46 5 0 chr13 16272143 16273315 -104010997 - L1Md_F2 LINE L1 -3 6579 5403 3 709 623 217 63 6 chr13 16273306 16273464 -104010848 - L1_Mur3 LINE L1 -876 5004 4838 3 709 413 309 64 32 chr13 16273472 16273659 -104010653 - ORR1D2 LTR MaLR -15 359 167 3 709 306 164 0 0 chr13 16273659 16273714 -104010598 + G-rich Low_complexity Low_complexity 5 59 0 3 709 550 225 108 1 chr13 16273715 16273882 -104010430 - ORR1D2 LTR MaLR -188 196 1 3 709 318 250 0 0 chr13 16273882 16273958 -104010354 - L1_Mur1 LINE L1 -1041 4845 4770 3 709 1700 260 41 20 chr13 16274048 16274660 -104009652 - L1_Mur3 LINE L1 -1130 4750 4126 3 709 910 260 30 0 chr13 16274710 16274910 -104009402 - B3 SINE B2 -3 213 8 3 709 420 164 0 0 chr13 16274934 16275044 -104009268 + CT-rich Low_complexity Low_complexity 1 110 0 3 709 207 0 0 0 chr13 16275044 16275067 -104009245 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 709 922 266 106 18 chr13 16275608 16275948 -104008364 - ORR1D2 LTR MaLR 0 370 1 3 709 231 220 0 0 chr13 16276409 16276459 -104007853 + MTD LTR MaLR 3 52 -327 3 709 584 279 15 82 chr13 16276461 16276656 -104007656 + MTD LTR MaLR 32 213 -206 3 709 776 254 26 74 chr13 16276649 16276879 -104007433 + MTE2a LTR MaLR 156 374 -5 3 709 685 276 48 112 chr13 16276889 16277401 -104006911 + MTE2a-int LTR MaLR 8 543 -715 3 709 578 330 87 36 chr13 16277419 16277726 -104006586 + MTE2a LTR MaLR 1 317 -104 3 709 198 0 0 0 chr13 16277726 16277748 -104006564 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 3 709 21 57 0 0 chr13 16278181 16278216 -104006096 + AT_rich Low_complexity Low_complexity 1 35 0 3 709 6119 136 18 8 chr13 16279062 16280032 -104004280 - Lx4A LINE L1 -46 7012 6034 3 709 3748 167 40 25 chr13 16280043 16280713 -104003599 - RMER19B LTR ERVK -12 890 211 3 709 11623 124 69 18 chr13 16280714 16281438 -104002874 - L1_Mur2 LINE L1 -223 5654 4930 3 709 189 0 0 0 chr13 16281438 16281459 -104002853 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 709 11623 124 69 18 chr13 16281459 16282704 -104001608 - L1_Mur2 LINE L1 -948 4929 3584 3 709 190 335 126 91 chr13 16282995 16283225 -104001087 - L2b LINE L2 -82 3293 3056 3 709 269 336 24 32 chr13 16285595 16285718 -103998594 - MER5A DNA MER1_type -35 154 33 3 709 325 0 22 22 chr13 16285838 16285884 -103998428 + (TTA)n Simple_repeat Simple_repeat 1 46 0 3 709 228 35 0 0 chr13 16286002 16286031 -103998281 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 3 709 1744 168 36 80 chr13 16287103 16287465 -103996847 + ORR1B1 LTR MaLR 41 386 -8 3 709 351 137 350 50 chr13 16287589 16287689 -103996623 + L1_Mur3 LINE L1 5580 5709 -171 3 709 1164 255 13 137 chr13 16287713 16288172 -103996140 + Lx7 LINE L1 6895 7296 -400 3 709 324 0 0 0 chr13 16288269 16288305 -103996007 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 3 709 234 318 37 0 chr13 16288333 16288440 -103995872 + Lx7 LINE L1 7581 7691 -5 3 709 363 105 18 0 chr13 16289040 16289097 -103995215 - MTD LTR MaLR -9 410 353 3 709 1667 208 21 15 chr13 16289177 16289509 -103994803 - MTD LTR MaLR -85 334 1 3 709 249 89 12 71 chr13 16291240 16291325 -103992987 + (CAAA)n Simple_repeat Simple_repeat 1 80 0 3 709 3056 111 7 14 chr13 16292712 16293152 -103991160 - Lx LINE L1 -295 6359 5923 3 709 1507 138 32 79 chr13 16293154 16293469 -103990843 + Lx LINE L1 6350 6649 -5 3 709 2556 84 71 0 chr13 16295528 16295895 -103988417 - L1_Mus1 LINE L1 -1 6566 6174 3 709 262 254 22 29 chr13 16296732 16296762 -103987550 + ORR1B1-int LTR MaLR 618 646 -863 3 709 899 89 89 0 chr13 16296762 16296878 -103987434 + B1_Mus1 SINE Alu 1 116 -32 3 709 378 0 0 0 chr13 16296878 16296920 -103987392 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 709 899 89 89 0 chr13 16296920 16296938 -103987374 + B1_Mus1 SINE Alu 117 145 -3 3 709 240 86 0 0 chr13 16296939 16296974 -103987338 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 709 5148 151 77 26 chr13 16297305 16298324 -103985988 + L1_Mur1 LINE L1 235 1304 -5680 3 709 532 81 128 0 chr13 16298341 16298427 -103985885 - L1_Mur1 LINE L1 -2883 3003 2907 3 709 3006 124 4 8 chr13 16298422 16298918 -103985394 + L1_Mur1 LINE L1 3401 3894 -1992 3 709 6280 99 0 5 chr13 16298904 16299774 -103984538 + L1_Mur1 LINE L1 4858 5724 -162 3 709 3824 134 36 48 chr13 16299774 16300520 -103983792 + Lx3A LINE L1 6243 6979 -2 3 709 6280 99 0 5 chr13 16300520 16300531 -103983781 + L1_Mur1 LINE L1 5725 5735 -151 3 709 309 233 17 53 chr13 16301442 16301754 -103982558 + CT-rich Low_complexity Low_complexity 1 300 0 3 709 366 40 60 0 chr13 16302455 16302505 -103981807 - MT2B2 LTR ERVL -254 330 278 3 709 1975 112 99 0 chr13 16302507 16302821 -103981491 - Lx2 LINE L1 -45 6952 6608 3 709 4740 178 31 23 chr13 16303787 16304817 -103979495 - L1_Mur3 LINE L1 -1467 4413 3376 3 709 401 314 69 7 chr13 16305671 16305881 -103978431 - L1_Mur3 LINE L1 -7029 699 512 3 709 393 341 142 9 chr13 16306534 16306753 -103977559 + MIRb SINE MIR 21 268 0 3 709 422 257 12 78 chr13 16306897 16307154 -103977158 + Lx7 LINE L1 7288 7527 -169 3 709 516 72 0 0 chr13 16307156 16307225 -103977087 + (TTCC)n Simple_repeat Simple_repeat 3 71 0 3 709 948 77 85 0 chr13 16307238 16307368 -103976944 - B1_Mus1 SINE Alu -7 141 1 3 709 517 28 28 0 chr13 16307433 16307504 -103976808 + (GA)n Simple_repeat Simple_repeat 1 73 0 3 709 312 160 120 0 chr13 16307512 16307587 -103976725 + Lx7 LINE L1 7613 7696 0 3 709 2298 216 75 39 chr13 16308372 16308969 -103975343 - RMER13B LTR ERVK -289 619 1 3 709 443 286 71 0 chr13 16309015 16309141 -103975171 - Lx9 LINE L1 -911 6733 6599 3 709 273 262 30 26 chr13 16309137 16309260 -103975052 - L1_Rod LINE L1 -723 5157 5036 3 709 264 127 67 19 chr13 16309377 16309481 -103974831 + (TATAA)n Simple_repeat Simple_repeat 1 109 0 3 709 447 297 49 30 chr13 16309517 16309781 -103974531 + Lx9 LINE L1 7198 7466 -178 3 709 351 0 0 0 chr13 16309781 16309820 -103974492 + (TAA)n Simple_repeat Simple_repeat 3 41 0 3 709 26 30 0 0 chr13 16309901 16309934 -103974378 + AT_rich Low_complexity Low_complexity 1 33 0 3 709 264 333 0 31 chr13 16310069 16310165 -103974147 - RSINE1 SINE B4 -61 104 12 3 709 516 320 65 23 chr13 16310179 16310576 -103973736 - L1M2 LINE L1 -2192 3951 3538 4 709 1541 52 0 0 chr13 16312576 16312769 -103971543 + L1_Mus1 LINE L1 6374 6566 -1 4 709 875 73 8 0 chr13 16312776 16312900 -103971412 + (GAAAA)n Simple_repeat Simple_repeat 1 125 0 4 709 282 160 0 0 chr13 16313481 16313531 -103970781 + (CATA)n Simple_repeat Simple_repeat 4 53 0 4 709 441 0 0 0 chr13 16313531 16313580 -103970732 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 709 24 0 0 0 chr13 16313838 16313862 -103970450 + AT_rich Low_complexity Low_complexity 1 24 0 4 709 193 321 24 24 chr13 16315126 16315209 -103969103 - L2c LINE L2 -309 3078 2996 4 709 312 27 0 0 chr13 16316259 16316296 -103968016 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 709 558 99 0 0 chr13 16317772 16317863 -103966449 + (TC)n Simple_repeat Simple_repeat 2 92 0 4 709 279 304 120 17 chr13 16318592 16318709 -103965603 + RLTR18B LTR ERVK 148 276 -236 4 709 252 263 17 17 chr13 16318837 16318895 -103965417 + RSINE1 SINE B4 36 93 -72 4 709 423 0 0 0 chr13 16319556 16319603 -103964709 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 709 213 39 0 0 chr13 16323214 16323240 -103961072 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 4 709 908 226 14 197 chr13 16323519 16323889 -103960423 - ORR1D1 LTR MaLR -72 302 1 4 709 281 391 143 17 chr13 16324024 16324261 -103960051 - MLT1J2 LTR MaLR -181 267 1 4 709 589 251 75 78 chr13 16324538 16324865 -103959447 - MTEa LTR MaLR -2 377 3 4 709 24 53 0 0 chr13 16324999 16325037 -103959275 + AT_rich Low_complexity Low_complexity 1 38 0 4 709 270 0 0 0 chr13 16325092 16325122 -103959190 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 709 1679 257 84 77 chr13 16325143 16325818 -103958494 - Lx9 LINE L1 -307 7337 6658 4 709 362 239 0 43 chr13 16325830 16325910 -103958402 + B1_Mus2 SINE Alu 60 139 -8 4 709 405 109 0 0 chr13 16325910 16325974 -103958338 + (CAATC)n Simple_repeat Simple_repeat 5 68 0 4 709 362 239 0 43 chr13 16325974 16325985 -103958327 + B1_Mus2 SINE Alu 140 147 0 4 709 182 232 13 92 chr13 16327656 16327732 -103956580 + L2a LINE L2 3357 3426 0 4 709 1152 294 26 31 chr13 16328284 16328379 -103955933 - MER121 Unknown Unknown -10 402 306 4 709 444 67 0 0 chr13 16328379 16328439 -103955873 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 709 1152 294 26 31 chr13 16328439 16328729 -103955583 - MER121 Unknown Unknown -107 305 20 4 709 387 41 0 0 chr13 16328847 16328896 -103955416 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 709 342 326 0 0 chr13 16330807 16330899 -103953413 - PB1D10 SINE Alu 0 117 26 4 709 28 29 0 0 chr13 16330977 16331012 -103953300 + AT_rich Low_complexity Low_complexity 1 35 0 4 709 490 352 78 60 chr13 16331278 16331610 -103952702 + MLT1E1A LTR MaLR 339 676 -4 4 709 29 0 0 0 chr13 16332268 16332297 -103952015 + AT_rich Low_complexity Low_complexity 1 29 0 4 709 300 325 50 27 chr13 16332331 16332552 -103951760 - L1MC1 LINE L1 -79 6254 6029 4 709 249 302 8 16 chr13 16332609 16332737 -103951575 - Lx9 LINE L1 0 7644 7518 4 709 748 353 59 12 chr13 16332791 16332926 -103951386 - Lx8 LINE L1 -179 7294 7159 4 709 333 0 0 0 chr13 16332926 16332963 -103951349 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 709 748 353 59 12 chr13 16332963 16333151 -103951161 - Lx8 LINE L1 -315 7158 6956 4 709 896 277 18 42 chr13 16333151 16333551 -103950761 - L1MC1 LINE L1 -399 5934 5545 4 709 372 280 149 32 chr13 16333635 16333823 -103950489 - B3 SINE B2 -6 210 1 4 709 278 26 0 25 chr13 16333834 16333874 -103950438 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 709 21 0 0 0 chr13 16333909 16333930 -103950382 + AT_rich Low_complexity Low_complexity 1 21 0 4 709 677 281 73 36 chr13 16334132 16334461 -103949851 + Lx8 LINE L1 6162 6502 -971 4 709 201 158 35 17 chr13 16334494 16334552 -103949760 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 4 709 233 108 66 26 chr13 16334803 16334879 -103949433 + (TCTCTG)n Simple_repeat Simple_repeat 6 84 0 4 709 816 174 6 17 chr13 16335737 16335918 -103948394 + CT-rich Low_complexity Low_complexity 2 180 0 4 709 1084 79 0 0 chr13 16335918 16336057 -103948255 - B1_Mus1 SINE Alu -7 141 3 4 709 3026 60 40 7 chr13 16336301 16336706 -103947606 - L1_Mus1 LINE L1 0 6567 6150 4 709 720 35 0 0 chr13 16336809 16336896 -103947416 + (TC)n Simple_repeat Simple_repeat 2 88 0 4 709 332 352 8 15 chr13 16337049 16337179 -103947133 - L1MC4 LINE L1 -607 7435 7307 4 709 723 221 32 0 chr13 16337209 16337386 -103946926 - B3 SINE B2 -1 197 5 4 709 303 93 0 0 chr13 16337555 16337598 -103946714 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 4 709 32817 55 7 10 chr13 16337701 16343119 -103941193 + L1Md_A LINE L1 189 5586 -297 4 709 8756 15 1 1 chr13 16343119 16344115 -103940197 + L1Md_A LINE L1 5587 6582 0 4 709 2305 35 0 0 chr13 16344132 16344416 -103939896 + L1Md_T LINE L1 5302 5585 -298 4 709 8272 42 0 0 chr13 16344417 16345412 -103938900 + L1Md_T LINE L1 5587 6581 -1 4 709 2230 63 0 0 chr13 16345412 16345711 -103938601 + L1Md_F2 LINE L1 5287 5585 -298 4 709 7909 48 11 5 chr13 16345712 16346694 -103937618 + L1Md_F2 LINE L1 5587 6574 -8 4 709 231 324 0 0 chr13 16347121 16347192 -103937120 + GA-rich Low_complexity Low_complexity 1 71 0 4 709 272 267 78 0 chr13 16349181 16349271 -103935041 + PB1D10 SINE Alu 21 117 0 4 709 263 319 96 132 chr13 16349502 16349722 -103934590 + MLT1A0 LTR MaLR 1 212 -196 4 709 287 313 0 29 chr13 16349747 16349849 -103934463 + MLT1A0 LTR MaLR 267 365 0 4 709 268 291 0 12 chr13 16350032 16350112 -103934200 - ID4_ SINE ID -3 80 2 4 709 321 329 67 59 chr13 16352421 16352658 -103931654 - MLT1F1 LTR MaLR -105 455 183 4 709 964 66 0 14 chr13 16353552 16353691 -103930621 + L1Md_F2 LINE L1 6436 6572 -10 4 709 25 31 0 0 chr13 16354221 16354253 -103930059 + AT_rich Low_complexity Low_complexity 1 32 0 4 709 780 332 24 5 chr13 16354425 16354637 -103929675 - B4A SINE B4 -18 274 59 4 709 6786 65 16 14 chr13 16354864 16355871 -103928441 - L1VL4 LINE L1 -4 3555 2547 4 709 7564 90 10 8 chr13 16355872 16357658 -103926654 - L1VL4 LINE L1 -1575 1984 194 4 709 336 24 0 0 chr13 16359021 16359062 -103925250 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 4 709 225 0 0 0 chr13 16359062 16359087 -103925225 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 709 315 189 0 0 chr13 16359153 16359178 -103925134 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 709 306 0 0 0 chr13 16359178 16359212 -103925100 + (TC)n Simple_repeat Simple_repeat 1 34 0 4 709 315 189 0 0 chr13 16359212 16359276 -103925036 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 709 257 279 19 25 chr13 16359285 16359447 -103924865 + (CTCA)n Simple_repeat Simple_repeat 2 162 0 4 709 729 127 0 0 chr13 16359449 16359583 -103924729 + (CA)n Simple_repeat Simple_repeat 2 135 0 4 709 2317 145 59 5 chr13 16362780 16363168 -103921144 + MTC LTR MaLR 9 417 -4 4 709 747 309 109 111 chr13 16363686 16363905 -103920407 - MTD LTR MaLR -33 386 178 4 709 1152 112 9 42 chr13 16363905 16364119 -103920193 - Lx LINE L1 -5 6649 6443 4 709 747 309 109 111 chr13 16364119 16364267 -103920045 - MTD LTR MaLR -242 177 20 4 709 1448 264 112 28 chr13 16365088 16365261 -103919051 - L1MB1 LINE L1 -77 6091 5919 4 709 1704 192 74 0 chr13 16365261 16365600 -103918712 - ORR1B2 LTR MaLR 0 367 4 4 709 1448 264 112 28 chr13 16365600 16366094 -103918218 - L1MB1 LINE L1 -250 5918 5368 4 709 323 375 68 0 chr13 16366110 16366286 -103918026 - RMER15 LTR ERVL -14 561 374 4 709 210 118 0 0 chr13 16367351 16367385 -103916927 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 4 709 330 345 72 92 chr13 16367600 16367948 -103916364 - ORR1E LTR MaLR 0 359 19 4 709 441 138 0 0 chr13 16368354 16368434 -103915878 + (GGAA)n Simple_repeat Simple_repeat 3 82 0 4 709 490 232 167 0 chr13 16369143 16369281 -103915031 - ORR1D2 LTR MaLR -41 329 169 4 709 384 22 0 0 chr13 16369283 16369328 -103914984 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 709 907 228 58 0 chr13 16369328 16369499 -103914813 - ORR1D2 LTR MaLR -189 181 1 4 709 378 0 0 0 chr13 16371785 16371827 -103912485 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 709 375 141 0 0 chr13 16376261 16376325 -103907987 + (GGA)n Simple_repeat Simple_repeat 3 66 0 4 709 235 26 0 71 chr13 16376338 16376380 -103907932 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 709 180 152 0 0 chr13 16379066 16379099 -103905213 + (TAA)n Simple_repeat Simple_repeat 2 34 0 4 709 9389 90 18 6 chr13 16379143 16381514 -103902798 + Lx3_Mus LINE L1 4605 7001 -8 4 88 1244 36 0 0 chr13 16383992 16384157 -103900155 - L1_Mm LINE L1 -4107 1776 1612 4 710 6655 51 0 10 chr13 16384157 16384989 -103899323 + L1Md_F2 LINE L1 5748 6571 -11 4 710 258 307 173 17 chr13 16385067 16385246 -103899066 - MIR SINE MIR -35 227 21 4 710 180 200 0 0 chr13 16386136 16386191 -103898121 + CT-rich Low_complexity Low_complexity 1 55 0 4 710 371 315 90 33 chr13 16386204 16386379 -103897933 - ID_B1 SINE B4 -48 244 66 4 710 7524 114 16 12 chr13 16386440 16387645 -103896667 + Lx2 LINE L1 5762 6970 -27 4 710 258 32 0 0 chr13 16387645 16387676 -103896636 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 4 710 2775 189 58 50 chr13 16387976 16388582 -103895730 + RMER19C LTR ERVK 1 611 0 4 710 591 117 0 0 chr13 16388611 16388705 -103895607 + (TATATG)n Simple_repeat Simple_repeat 1 94 0 4 710 22 80 0 0 chr13 16389669 16389719 -103894593 + AT_rich Low_complexity Low_complexity 1 50 0 4 710 219 103 0 0 chr13 16390684 16390723 -103893589 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 4 710 613 264 50 33 chr13 16390940 16391120 -103893192 + B3A SINE B2 14 196 -2 4 710 816 70 5 85 chr13 16391309 16391497 -103892815 + CT-rich Low_complexity Low_complexity 4 176 0 4 710 704 353 143 32 chr13 16391574 16392698 -103891614 - L2 LINE L2 -871 2548 1300 4 710 190 349 182 36 chr13 16392890 16393027 -103891285 - MIR SINE MIR -86 176 20 4 710 1254 76 16 26 chr13 16394208 16394398 -103889914 + L1Md_F2 LINE L1 6395 6582 0 4 710 270 0 0 0 chr13 16394464 16394494 -103889818 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 710 664 290 130 35 chr13 16394535 16394796 -103889516 - ORR1D2 LTR MaLR -84 286 1 4 710 253 282 76 13 chr13 16395616 16395695 -103888617 - MLT1A1 LTR MaLR -324 84 1 4 710 189 0 0 0 chr13 16395832 16395853 -103888459 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 710 293 117 0 16 chr13 16395902 16395963 -103888349 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 710 490 252 123 73 chr13 16396585 16396846 -103887466 + ORR1E LTR MaLR 84 357 -2 5 710 453 189 0 0 chr13 16399133 16399223 -103885089 + (CATA)n Simple_repeat Simple_repeat 2 91 0 5 710 22 35 0 0 chr13 16399878 16399907 -103884405 + AT_rich Low_complexity Low_complexity 1 29 0 5 710 419 229 14 122 chr13 16399938 16400077 -103884235 + B3A SINE B2 75 198 0 5 710 752 293 34 2 chr13 16400120 16400395 -103883917 + Lx8 LINE L1 6622 6999 -645 5 710 414 133 11 22 chr13 16400395 16400487 -103883825 + CT-rich Low_complexity Low_complexity 4 94 0 5 710 1011 303 53 21 chr13 16400512 16400943 -103883369 + Lx8 LINE L1 6873 7317 -156 5 710 416 51 0 17 chr13 16400950 16401010 -103883302 + (CATA)n Simple_repeat Simple_repeat 3 61 0 5 710 429 20 0 0 chr13 16401577 16401627 -103882685 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 710 716 107 190 0 chr13 16401627 16401748 -103882564 - B2_Mm2 SINE B2 -50 145 2 5 710 261 286 49 39 chr13 16402705 16402807 -103881505 + MER5A1 DNA MER1_type 30 132 -34 5 710 307 298 9 37 chr13 16403199 16403307 -103881005 + MLT1A0 LTR MaLR 261 365 0 5 710 2985 108 18 2 chr13 16404097 16404553 -103879759 - L1_Mm LINE L1 -121 5762 5300 5 710 910 115 0 7 chr13 16404544 16404684 -103879628 + Lx2 LINE L1 6508 6646 -351 5 710 888 128 184 11 chr13 16404681 16404871 -103879441 + Lx2 LINE L1 6775 6997 0 5 710 849 214 78 0 chr13 16405283 16405475 -103878837 + B3 SINE B2 4 210 -6 5 710 453 298 0 9 chr13 16405517 16405622 -103878690 + ID_B1 SINE B4 91 194 -30 5 710 1298 201 130 30 chr13 16405909 16406247 -103878065 - ORR1D1 LTR MaLR 0 374 3 5 710 320 330 9 9 chr13 16406448 16406564 -103877748 - MER121 Unknown Unknown -222 190 75 5 710 198 0 0 0 chr13 16406575 16406597 -103877715 + (A)n Simple_repeat Simple_repeat 1 22 0 5 710 271 0 25 25 chr13 16407185 16407225 -103877087 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 710 1027 81 0 0 chr13 16407225 16407361 -103876951 - B1_Mus1 SINE Alu -8 140 5 5 710 257 300 12 0 chr13 16407367 16407447 -103876865 + MER121 Unknown Unknown 124 204 -208 5 710 202 183 50 0 chr13 16407476 16407536 -103876776 + CT-rich Low_complexity Low_complexity 2 64 0 5 710 366 100 0 0 chr13 16408815 16408865 -103875447 + HAL1-3A_ME LINE L1 1969 2018 -840 5 710 268 229 18 0 chr13 16408877 16408986 -103875326 + (CA)n Simple_repeat Simple_repeat 1 111 0 5 710 180 0 0 0 chr13 16408989 16409009 -103875303 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 5 710 219 125 0 0 chr13 16409956 16409988 -103874324 + ID4_ SINE ID 10 41 -42 5 710 246 319 26 17 chr13 16410376 16410491 -103873821 + PB1D10 SINE Alu 2 117 0 5 710 369 0 0 0 chr13 16410912 16410953 -103873359 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 710 346 306 47 31 chr13 16412864 16412992 -103871320 + RSINE1 SINE B4 1 130 -35 5 710 369 0 0 0 chr13 16413017 16413058 -103871254 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 710 520 295 50 45 chr13 16413553 16413773 -103870539 + Lx9 LINE L1 6306 6526 -1118 5 710 1553 166 32 46 chr13 16413777 16414145 -103870167 + ORR1A2 LTR MaLR 41 386 -8 5 710 3224 158 11 4 chr13 16414149 16414682 -103869630 + ORR1A2-int LTR MaLR 1 537 -1426 5 710 658 90 0 0 chr13 16414676 16414765 -103869547 + MTB_Mm LTR MaLR 319 407 0 5 710 2023 96 18 0 chr13 16414765 16415044 -103869268 + ORR1A2 LTR MaLR 44 327 0 5 710 427 226 11 11 chr13 16415044 16415138 -103869174 + Lx8 LINE L1 6387 6480 -993 5 710 8222 116 30 29 chr13 16415278 16417007 -103867305 - Lx3B LINE L1 -5 6968 5259 5 710 367 132 40 0 chr13 16418581 16418657 -103865655 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 5 710 1277 197 49 5 chr13 16418911 16419167 -103865145 - MTD LTR MaLR 0 419 125 5 710 733 270 56 164 chr13 16419182 16419559 -103864753 - MTE2a LTR MaLR -43 336 1 5 710 189 0 0 0 chr13 16420566 16420587 -103863725 + (CAA)n Simple_repeat Simple_repeat 1 21 0 5 710 201 196 0 19 chr13 16420588 16420640 -103863672 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 5 710 25 51 0 0 chr13 16421608 16421647 -103862665 + AT_rich Low_complexity Low_complexity 1 39 0 5 710 3952 57 6 4 chr13 16422092 16422582 -103861730 + L1_Mus2 LINE L1 6074 6564 -2 5 710 252 0 0 0 chr13 16423545 16423573 -103860739 + (A)n Simple_repeat Simple_repeat 1 28 0 5 710 231 61 0 0 chr13 16425141 16425174 -103859138 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 710 3316 32 0 12 chr13 16425631 16426041 -103858271 - L1Md_F3 LINE L1 -14 6570 6166 5 710 240 35 0 0 chr13 16426102 16426131 -103858181 + (A)n Simple_repeat Simple_repeat 1 29 0 5 710 1868 62 8 0 chr13 16426533 16426789 -103857523 - L1_Mus3 LINE L1 -696 5942 5685 5 710 4174 122 24 27 chr13 16426789 16427465 -103856847 + L1_Mus3 LINE L1 5962 6635 -3 5 710 27 29 0 0 chr13 16427834 16427868 -103856444 + AT_rich Low_complexity Low_complexity 1 34 0 5 710 264 122 0 0 chr13 16427903 16427944 -103856368 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 710 3226 56 27 115 chr13 16428094 16428615 -103855697 - MT2C_Mm LTR ERVL 0 475 1 5 710 236 200 17 0 chr13 16428701 16428761 -103855551 + GA-rich Low_complexity Low_complexity 2 62 0 5 710 247 286 43 0 chr13 16429375 16429445 -103854867 - ORR1E LTR MaLR -11 348 276 5 710 213 39 0 0 chr13 16431187 16431213 -103853099 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 710 221 313 48 48 chr13 16431602 16431706 -103852606 - L2c LINE L2 -5 3382 3279 5 710 289 349 0 0 chr13 16434564 16434690 -103849622 + L1MC LINE L1 5523 5648 -2234 5 710 576 162 0 0 chr13 16434940 16435045 -103849267 + (CA)n Simple_repeat Simple_repeat 1 105 0 5 710 186 286 70 14 chr13 16435418 16435489 -103848823 - L2c LINE L2 -230 3157 3083 5 710 1418 112 0 0 chr13 16436016 16436221 -103848091 - L1Md_F2 LINE L1 -10 6572 6368 5 710 281 280 11 21 chr13 16436581 16436676 -103847636 + GA-rich Low_complexity Low_complexity 4 97 0 5 710 325 282 110 77 chr13 16436762 16437088 -103847224 - L2a LINE L2 -113 3313 2977 5 710 232 304 109 47 chr13 16437536 16437675 -103846637 - L2a LINE L2 -1 3425 3229 5 710 567 0 0 0 chr13 16438876 16438939 -103845373 + (GA)n Simple_repeat Simple_repeat 1 63 0 5 710 418 306 111 61 chr13 16439125 16439306 -103845006 + ORR1E LTR MaLR 62 251 -108 5 710 217 128 0 49 chr13 16439407 16439448 -103844864 + A-rich Low_complexity Low_complexity 4 42 0 5 710 264 342 0 17 chr13 16439593 16439712 -103844600 + GA-rich Low_complexity Low_complexity 1 117 0 5 710 539 340 50 64 chr13 16441031 16441311 -103843001 - B4 SINE B4 -15 277 2 5 710 182 300 65 32 chr13 16441435 16441528 -103842784 + MIR SINE MIR 164 259 -3 5 710 335 60 20 0 chr13 16442731 16442781 -103841531 + (CTA)n Simple_repeat Simple_repeat 1 51 0 5 710 183 170 0 0 chr13 16443055 16443102 -103841210 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 710 241 345 75 87 chr13 16443264 16443505 -103840807 + MLT1C LTR MaLR 37 274 -193 5 710 1927 148 8 39 chr13 16444738 16445124 -103839188 - L1_Mur2 LINE L1 -377 5500 5127 5 710 189 0 0 0 chr13 16445124 16445145 -103839167 + (TTA)n Simple_repeat Simple_repeat 1 21 0 5 710 1190 42 0 7 chr13 16445469 16445613 -103838699 + B1_Mus1 SINE Alu 2 144 -4 5 710 216 0 0 0 chr13 16445614 16445638 -103838674 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5 710 1436 57 0 0 chr13 16445684 16445859 -103838453 + B2_Mm1a SINE B2 1 175 -18 5 710 336 50 0 158 chr13 16445859 16445954 -103838358 + (TAAA)n Simple_repeat Simple_repeat 2 81 0 5 710 195 42 0 0 chr13 16446109 16446133 -103838179 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 710 225 261 15 0 chr13 16446428 16446493 -103837819 - Lx7 LINE L1 -127 7346 7281 5 710 554 239 14 0 chr13 16446500 16446642 -103837670 + L1_Mur3 LINE L1 5014 5157 -723 5 710 8419 270 47 33 chr13 16446688 16448225 -103836087 - Lx7 LINE L1 -1511 6185 4617 5 710 1027 290 42 8 chr13 16448225 16448583 -103835729 + ORR1D2 LTR MaLR 1 370 0 5 710 8419 267 38 37 chr13 16448583 16450700 -103833612 - Lx7 LINE L1 -1264 4616 2482 5 710 208 221 13 13 chr13 16451067 16451145 -103833167 + GA-rich Low_complexity Low_complexity 2 79 0 5 710 441 81 0 0 chr13 16452767 16452829 -103831483 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 710 2494 166 32 11 chr13 16452927 16453366 -103830946 - Lx4A LINE L1 0 7058 6611 5 710 1655 132 92 3 chr13 16453367 16453670 -103830642 + Lx4A LINE L1 6291 6620 -438 5 710 645 313 59 29 chr13 16453669 16453975 -103830337 - Lx8 LINE L1 -223 7250 6936 5 710 267 60 0 82 chr13 16454377 16454450 -103829862 + (TGG)n Simple_repeat Simple_repeat 1 67 0 5 710 555 219 0 0 chr13 16454480 16454658 -103829654 + (TGG)n Simple_repeat Simple_repeat 3 180 0 5 710 957 167 0 7 chr13 16454688 16454959 -103829353 + (TGG)n Simple_repeat Simple_repeat 1 269 0 5 710 501 243 3 9 chr13 16454999 16455342 -103828970 + (TGG)n Simple_repeat Simple_repeat 1 340 0 5 710 329 0 24 0 chr13 16455462 16455503 -103828809 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 5 710 241 333 0 25 chr13 16456253 16456333 -103827979 + MIRc SINE MIR 93 170 -98 5 710 532 256 0 93 chr13 16457378 16457445 -103826867 + B3 SINE B2 1 67 -149 5 710 4397 26 0 0 chr13 16457445 16457950 -103826362 - L1Md_T LINE L1 -1 6581 6077 5 710 532 258 14 92 chr13 16457950 16458018 -103826294 + B3 SINE B2 59 145 -50 5 710 326 74 19 0 chr13 16458018 16458072 -103826240 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 710 358 270 136 79 chr13 16458072 16458112 -103826200 + B2_Mm2 SINE B2 146 187 -8 5 710 3086 69 0 0 chr13 16458215 16458606 -103825706 + L1_Mus1 LINE L1 6163 6553 -14 5 710 22 0 0 0 chr13 16458611 16458633 -103825679 + AT_rich Low_complexity Low_complexity 1 22 0 5 710 4446 14 0 0 chr13 16459771 16460264 -103824048 - MT2_Mm LTR ERVL 0 493 1 5 710 277 26 0 0 chr13 16460264 16460302 -103824010 - MERVL-int LTR ERVL 0 5485 5448 5 710 390 167 46 35 chr13 16460302 16460389 -103823923 - ORR1A3-int LTR MaLR -1323 640 553 5 710 25377 21 0 0 chr13 16460389 16463397 -103820915 - MERVL-int LTR ERVL -125 5360 2352 5 710 12052 11 23 0 chr13 16463392 16464820 -103819492 - MERVL-int LTR ERVL -4024 1461 1 5 710 4446 14 0 0 chr13 16464820 16465313 -103818999 - MT2_Mm LTR ERVL 0 493 1 5 710 680 250 10 20 chr13 16465519 16465715 -103818597 - MER121 Unknown Unknown -133 279 86 5 710 2038 124 9 58 chr13 16466375 16466718 -103817594 - ORR1A2 LTR MaLR 0 327 2 5 710 336 48 0 0 chr13 16468864 16468906 -103815406 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 710 376 243 76 56 chr13 16468908 16469052 -103815260 + MER2 DNA MER2_type 122 268 -77 5 710 3420 33 2 0 chr13 16469056 16469451 -103814861 + MTA_Mm LTR MaLR 1 396 0 6 710 254 29 29 0 chr13 16469880 16469915 -103814397 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 6 710 233 348 11 11 chr13 16471043 16471133 -103813179 - L4 LINE RTE -174 1855 1766 6 710 295 276 49 63 chr13 16471875 16472018 -103812294 - MTEa LTR MaLR -13 366 226 6 710 328 377 189 49 chr13 16473093 16473564 -103810748 - MLT2E LTR ERVL -91 537 1 6 710 181 206 0 0 chr13 16473745 16473779 -103810533 + MIR SINE MIR 111 144 -118 6 710 1091 83 6 0 chr13 16474055 16474211 -103810101 + (TTTC)n Simple_repeat Simple_repeat 2 158 0 6 710 440 342 67 20 chr13 16475733 16475882 -103808430 - RSINE1 SINE B4 -6 159 4 6 710 262 343 29 22 chr13 16476113 16476250 -103808062 - MLT1A1 LTR MaLR 0 408 271 6 710 282 334 22 102 chr13 16476584 16476778 -103807534 + MLT1E2 LTR MaLR 363 567 -87 6 710 244 295 39 0 chr13 16476780 16476858 -103807454 + MLT1F2 LTR MaLR 65 145 -415 6 710 36239 30 1 0 chr13 16477069 16483894 -103800418 - L1Md_T LINE L1 0 6585 1 6 710 1334 219 37 19 chr13 16484169 16484490 -103799822 + RMER5 LTR ERV1 182 508 -26 6 710 289 371 61 33 chr13 16484728 16484909 -103799403 + MER58A DNA MER1_type 7 192 -32 6 710 260 255 36 109 chr13 16485140 16485250 -103799062 + MTEb LTR MaLR 269 379 0 6 710 723 187 8 0 chr13 16486414 16486537 -103797775 + B1_Mur2 SINE Alu 19 142 -7 6 710 323 312 147 44 chr13 16486944 16487265 -103797047 + ORR1E LTR MaLR 4 353 -26 6 710 2653 323 77 96 chr13 16487322 16487880 -103796432 + MTE-int LTR MaLR 48 675 -905 6 710 1047 115 0 0 chr13 16487880 16488019 -103796293 + B1_Mus1 SINE Alu 1 139 -9 6 710 218 56 28 0 chr13 16488019 16488055 -103796257 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 710 2653 323 77 96 chr13 16488055 16488114 -103796198 + MTE-int LTR MaLR 676 693 -887 6 710 2314 62 3 64 chr13 16488114 16488457 -103795855 + L1_Mus2 LINE L1 6245 6566 0 6 710 2653 323 77 96 chr13 16488457 16489157 -103795155 + MTE-int LTR MaLR 694 1347 -233 6 710 291 54 0 0 chr13 16489157 16489194 -103795118 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 710 2653 323 77 96 chr13 16489194 16489382 -103794930 + MTE-int LTR MaLR 1348 1527 -53 6 710 388 330 83 66 chr13 16489382 16489715 -103794597 + ORR1E LTR MaLR 2 367 -12 6 710 453 36 0 0 chr13 16490104 16490159 -103794153 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 710 498 108 0 0 chr13 16490442 16490516 -103793796 + (TC)n Simple_repeat Simple_repeat 1 74 0 6 710 229 227 39 146 chr13 16493250 16493353 -103790959 + MTEa LTR MaLR 14 105 -274 6 710 302 248 98 49 chr13 16494137 16494260 -103790052 - MTEb LTR MaLR 0 379 251 6 710 204 97 0 0 chr13 16494438 16494469 -103789843 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 710 210 91 0 0 chr13 16495043 16495076 -103789236 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 6 710 293 312 92 60 chr13 16495419 16495603 -103788709 + MIRb SINE MIR 22 211 -57 6 710 936 136 0 17 chr13 16495697 16495876 -103788436 + GA-rich Low_complexity Low_complexity 3 178 0 6 710 22 0 0 0 chr13 16496205 16496227 -103788085 + AT_rich Low_complexity Low_complexity 1 22 0 6 710 425 371 91 39 chr13 16496368 16496654 -103787658 - L1M5 LINE L1 -445 5795 5495 6 710 275 315 52 42 chr13 16497216 16497312 -103787000 + RMER15 LTR ERVL 479 575 0 6 710 2101 273 43 10 chr13 16497312 16497996 -103786316 - Lx9 LINE L1 -594 7050 6194 6 710 423 38 0 0 chr13 16497996 16498049 -103786263 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 710 1425 285 89 19 chr13 16498049 16498792 -103785520 - Lx9 LINE L1 -1280 6193 5363 6 710 2357 225 50 31 chr13 16498800 16498958 -103785354 + L1_Rod LINE L1 4518 4676 -1171 6 710 3158 64 5 0 chr13 16498958 16499349 -103784963 - MTA_Mm LTR MaLR -3 393 1 6 710 2357 225 50 31 chr13 16499349 16499998 -103784314 + L1_Rod LINE L1 4677 5340 -507 6 710 35245 45 0 3 chr13 16500180 16505389 -103778923 + L1Md_T LINE L1 298 5589 -297 1 710 8350 36 0 0 chr13 16505390 16506384 -103777928 + L1Md_T LINE L1 5591 6584 -1 1 710 399 369 73 4 chr13 16508076 16508321 -103775991 - MIRb SINE MIR -6 262 1 2 710 468 0 0 0 chr13 16508417 16508469 -103775843 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 710 360 0 0 0 chr13 16508739 16508779 -103775533 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 710 399 41 0 0 chr13 16508779 16508828 -103775484 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 5 710 2526 328 84 35 chr13 16508890 16510476 -103773836 - Lx8 LINE L1 -31 7442 5780 6 710 22 0 0 0 chr13 16510476 16510498 -103773814 + AT_rich Low_complexity Low_complexity 1 22 0 7 710 2220 282 55 29 chr13 16510502 16511328 -103772984 - Lx9 LINE L1 -20 7624 6778 8 710 418 277 41 16 chr13 16511336 16511457 -103772855 - Lx9 LINE L1 -1179 6465 6342 8 710 342 0 0 0 chr13 16511460 16511498 -103772814 + (TC)n Simple_repeat Simple_repeat 1 38 0 9 710 522 46 0 0 chr13 16511501 16511566 -103772746 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 710 237 241 17 85 chr13 16511582 16511700 -103772612 - Lx9 LINE L1 -1397 6247 6138 8 710 1854 237 99 46 chr13 16511800 16512518 -103771794 + Lx9 LINE L1 5148 5938 -1706 1 710 315 0 0 0 chr13 16512520 16512555 -103771757 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 710 503 208 4 0 chr13 16512556 16512670 -103771642 - Lx9 LINE L1 -522 5822 5663 8 710 549 311 8 0 chr13 16513887 16514006 -103770306 - ID_B1 SINE B4 -6 218 99 1 710 222 37 0 0 chr13 16514147 16514174 -103770138 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 710 232 218 11 11 chr13 16514778 16514866 -103769446 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 1 711 1148 153 5 42 chr13 16516385 16516597 -103767715 + MER121 Unknown Unknown 48 251 -161 1 711 3282 240 136 41 chr13 16516674 16517790 -103766522 - Lx9 LINE L1 -20 7624 6403 1 711 301 398 55 21 chr13 16518669 16518905 -103765407 + L1MDa LINE L1 97 340 -6207 1 711 205 288 13 27 chr13 16518945 16519020 -103765292 + CT-rich Low_complexity Low_complexity 2 75 0 1 711 295 318 179 44 chr13 16519149 16519445 -103764867 + L1MDa LINE L1 564 899 -5648 1 711 3165 68 16 14 chr13 16519545 16519978 -103764334 + L1_Mur1 LINE L1 4752 5185 -701 2 711 714 307 146 14 chr13 16520136 16520635 -103763677 + L1MDa LINE L1 1425 1989 -4651 1 711 1206 54 0 0 chr13 16520770 16520917 -103763395 + B1_Mm SINE Alu 1 147 0 2 711 29 60 0 0 chr13 16521001 16521051 -103763261 + AT_rich Low_complexity Low_complexity 1 50 0 2 711 477 319 68 72 chr13 16521051 16521315 -103762997 + L1MDa LINE L1 2292 2560 -4080 1 711 571 289 53 16 chr13 16521315 16521505 -103762807 + B3A SINE B2 2 198 0 2 711 477 305 105 32 chr13 16521505 16521886 -103762426 + L1MDa LINE L1 2561 2964 -3580 1 711 243 227 245 42 chr13 16521928 16522144 -103762168 + L1MDa LINE L1 5474 5733 -811 1 711 6706 34 2 1 chr13 16522148 16522984 -103761328 - MT-int LTR MaLR -84 1014 178 2 711 459 161 4 0 chr13 16523592 16523672 -103760640 + B3A SINE B2 1 83 -133 2 711 264 262 48 48 chr13 16524412 16524496 -103759816 + MIRc SINE MIR 64 147 -121 2 711 193 329 34 45 chr13 16524815 16524904 -103759408 + MIRb SINE MIR 45 132 -136 2 711 297 0 0 0 chr13 16525830 16525863 -103758449 + (GA)n Simple_repeat Simple_repeat 1 33 0 2 711 342 0 0 0 chr13 16526216 16526254 -103758058 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 711 390 21 0 0 chr13 16527137 16527184 -103757128 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 711 21 71 0 0 chr13 16527797 16527839 -103756473 + AT_rich Low_complexity Low_complexity 1 42 0 3 711 270 281 0 0 chr13 16528417 16528481 -103755831 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 711 401 304 127 81 chr13 16528539 16528775 -103755537 - B4 SINE B4 -22 270 24 3 711 414 0 0 0 chr13 16528977 16529023 -103755289 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 711 333 0 0 0 chr13 16529023 16529059 -103755253 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 711 413 289 123 8 chr13 16529114 16529236 -103755076 - B1F1 SINE Alu -7 142 7 3 711 279 0 0 0 chr13 16529400 16529431 -103754881 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 711 428 249 128 11 chr13 16529432 16529619 -103754693 - L1M3 LINE L1 -1059 5081 4873 3 711 452 279 6 0 chr13 16529649 16529810 -103754502 + (TA)n Simple_repeat Simple_repeat 2 163 0 3 711 542 75 12 0 chr13 16530055 16530135 -103754177 + (TA)n Simple_repeat Simple_repeat 2 82 0 4 711 384 216 92 25 chr13 16530163 16530282 -103754030 + ORR1B2 LTR MaLR 2 128 -239 4 711 2035 208 59 0 chr13 16530406 16530848 -103753464 + MT2A LTR ERVL 7 474 -59 4 711 189 195 0 0 chr13 16530894 16530935 -103753377 + (TCG)n Simple_repeat Simple_repeat 2 42 0 4 711 31 0 0 0 chr13 16532006 16532037 -103752275 + AT_rich Low_complexity Low_complexity 1 31 0 4 711 5669 161 26 19 chr13 16532041 16532941 -103751371 - Lx4A LINE L1 0 7058 6146 4 711 222 0 79 0 chr13 16532941 16532979 -103751333 + (TTG)n Simple_repeat Simple_repeat 2 42 0 4 711 1138 68 0 0 chr13 16532981 16533128 -103751184 - B1_Mus1 SINE Alu 0 148 2 4 711 5669 161 26 19 chr13 16533128 16533215 -103751097 - Lx4A LINE L1 -913 6145 6061 4 711 574 301 38 19 chr13 16533800 16534064 -103750248 - Lx9 LINE L1 -212 7432 7164 4 711 326 326 80 77 chr13 16534603 16535052 -103749260 - MER44B DNA MER2_type -111 439 3 4 711 3345 160 14 9 chr13 16535286 16535866 -103748446 - Lx3B LINE L1 -1 6972 6390 5 711 1078 85 0 0 chr13 16535875 16536016 -103748296 + B1_Mm SINE Alu 1 141 -6 5 711 615 126 0 0 chr13 16536020 16536147 -103748165 + (A)n Simple_repeat Simple_repeat 1 127 0 5 711 6784 84 63 1 chr13 16536152 16537342 -103746970 - L1_Mus4 LINE L1 -12 6624 5356 5 711 966 305 50 64 chr13 16538362 16538944 -103745368 + Lx9 LINE L1 6900 7473 -171 5 711 23 78 0 0 chr13 16539034 16539085 -103745227 + AT_rich Low_complexity Low_complexity 1 51 0 5 711 244 305 54 49 chr13 16539311 16539535 -103744777 - L1ME4a LINE L1 -45 6079 5855 5 711 1628 199 43 19 chr13 16539835 16540157 -103744155 - Lx5 LINE L1 -3 7047 6718 5 711 1578 251 82 8 chr13 16540615 16541005 -103743307 - MTD LTR MaLR 0 419 1 5 711 513 47 0 0 chr13 16541200 16541264 -103743048 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 711 219 333 26 61 chr13 16541440 16541523 -103742789 + RSINE1 SINE B4 45 125 -40 6 711 408 20 0 0 chr13 16541523 16541572 -103742740 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 711 219 333 26 61 chr13 16541572 16541603 -103742709 + RSINE1 SINE B4 126 155 -10 6 711 591 306 63 76 chr13 16543357 16543747 -103740565 - MLT1B LTR MaLR -7 460 4 6 711 328 313 153 0 chr13 16546906 16547037 -103737275 - MamRep4096 DNA hAT? -3 423 273 6 711 381 282 94 19 chr13 16547054 16547213 -103737099 - MamRep4096 DNA hAT? -237 189 19 6 711 3724 148 78 5 chr13 16548157 16548802 -103735510 - RLTR17 LTR ERVK 0 692 1 6 711 29 0 0 0 chr13 16549590 16549619 -103734693 + AT_rich Low_complexity Low_complexity 1 29 0 6 711 3327 43 2 0 chr13 16550017 16550414 -103733898 - L1_Mus1 LINE L1 -250 6317 5920 6 711 365 266 80 84 chr13 16550417 16550450 -103733862 + RMER13B LTR ERVK 182 227 -524 6 711 1500 83 0 0 chr13 16550450 16550654 -103733658 + L1_Mus1 LINE L1 6364 6567 0 6 711 1588 257 78 56 chr13 16550654 16551378 -103732934 + RMER13B LTR ERVK 228 908 0 6 711 1297 288 90 16 chr13 16551441 16551985 -103732327 - Lx8 LINE L1 -3 7470 6887 6 711 762 11 0 0 chr13 16552047 16552134 -103732178 + (GAA)n Simple_repeat Simple_repeat 1 87 0 7 711 2551 291 37 16 chr13 16552632 16553423 -103730889 - Lx8 LINE L1 -583 6890 6084 6 711 292 284 13 51 chr13 16555683 16555761 -103728551 + B4A SINE B4 4 78 -214 7 711 215 193 35 0 chr13 16555784 16555841 -103728471 + (CATA)n Simple_repeat Simple_repeat 4 62 0 7 711 1300 85 29 20 chr13 16555878 16556082 -103728230 + L1_Mur1 LINE L1 4836 5041 -845 7 711 506 233 33 8 chr13 16556271 16556392 -103727920 - MER5A1 DNA MER1_type -42 124 1 7 711 238 286 99 16 chr13 16557258 16557379 -103726933 + MIRb SINE MIR 12 142 -126 7 711 34 24 0 0 chr13 16557981 16558022 -103726290 + AT_rich Low_complexity Low_complexity 1 41 0 7 711 338 322 33 8 chr13 16558103 16558225 -103726087 + ID_B1 SINE B4 97 221 -3 7 711 324 279 109 65 chr13 16558392 16558705 -103725607 + L1MC1 LINE L1 1400 1732 -4776 7 711 4522 73 28 11 chr13 16558705 16559318 -103724994 + L1_Mus1 LINE L1 5945 6567 0 7 711 324 279 109 65 chr13 16559318 16559418 -103724894 + L1MC1 LINE L1 1733 1830 -4678 7 711 315 49 0 0 chr13 16559482 16559523 -103724789 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 711 439 301 121 10 chr13 16559564 16559751 -103724561 + L1MC1 LINE L1 4384 4593 -1728 7 711 360 0 0 0 chr13 16559751 16559791 -103724521 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 711 225 0 0 0 chr13 16559791 16559815 -103724497 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 711 439 301 121 10 chr13 16559815 16560032 -103724280 + L1MC1 LINE L1 4594 4832 -1489 7 711 726 278 74 85 chr13 16560089 16560467 -103723845 + MTE2a LTR MaLR 6 379 0 8 711 528 272 150 9 chr13 16560470 16560796 -103723516 + L1MC1 LINE L1 4901 5272 -1049 7 711 234 0 0 0 chr13 16560939 16560965 -103723347 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 711 360 0 0 0 chr13 16560965 16561004 -103723308 + (GA)n Simple_repeat Simple_repeat 1 40 0 8 711 1205 256 69 64 chr13 16561048 16561645 -103722667 + L1MC1 LINE L1 5429 6028 -480 7 711 232 253 42 10 chr13 16561643 16561739 -103722573 + Lx5 LINE L1 6952 7050 0 8 711 487 284 42 0 chr13 16561748 16561938 -103722374 + L1MC1 LINE L1 6015 6212 -296 7 711 554 179 17 6 chr13 16562019 16562193 -103722119 + (TG)n Simple_repeat Simple_repeat 2 177 0 8 711 22 56 0 0 chr13 16562224 16562260 -103722052 + AT_rich Low_complexity Low_complexity 1 36 0 8 711 352 273 92 14 chr13 16563717 16563867 -103720445 + MamGypLTR2b LTR Gypsy 641 922 0 8 711 540 329 170 16 chr13 16564093 16564523 -103719789 - MLT1D LTR MaLR -4 501 6 9 711 192 152 0 0 chr13 16564943 16564976 -103719336 + GA-rich Low_complexity Low_complexity 2 34 0 9 711 484 290 60 120 chr13 16565324 16565657 -103718655 - MLT2C1 LTR ERVL -84 313 1 9 711 245 292 15 0 chr13 16565712 16565777 -103718535 - ID SINE ID -158 66 1 9 711 864 55 0 0 chr13 16566808 16566918 -103717394 + (TTC)n Simple_repeat Simple_repeat 2 111 0 9 711 183 62 104 0 chr13 16567366 16567414 -103716898 + (CAAAC)n Simple_repeat Simple_repeat 2 54 0 9 711 186 133 0 0 chr13 16567423 16567453 -103716859 + (TGGA)n Simple_repeat Simple_repeat 1 30 0 9 711 580 99 10 19 chr13 16567861 16567964 -103716348 + (TTTTC)n Simple_repeat Simple_repeat 4 105 0 9 711 558 133 0 0 chr13 16567961 16568051 -103716261 + (TCCC)n Simple_repeat Simple_repeat 4 93 0 9 711 369 299 106 56 chr13 16568440 16568638 -103715674 - MLT2B3 LTR ERVL -239 315 108 9 711 271 281 167 30 chr13 16569351 16569483 -103714829 + MTEa LTR MaLR 230 379 0 1 711 1388 365 103 47 chr13 16569483 16570676 -103713636 + MTEa-int LTR MaLR 1 1260 -320 1 711 325 304 43 17 chr13 16570645 16570762 -103713550 + MTEa-int LTR MaLR 1430 1549 -31 1 711 229 340 116 11 chr13 16570811 16570906 -103713406 + ORR1E LTR MaLR 51 155 -204 1 711 3083 71 5 2 chr13 16571010 16571405 -103712907 + MTA_Mm LTR MaLR 1 396 0 1 711 7648 64 23 61 chr13 16571405 16572547 -103711765 + MTA_Mm-int LTR MaLR 1 1098 0 1 711 2757 55 71 0 chr13 16572547 16572911 -103711401 + MTA_Mm LTR MaLR 1 390 -6 1 711 3976 88 13 0 chr13 16573666 16574198 -103710114 - L1_Mus1 LINE L1 0 6567 6029 1 711 350 217 47 0 chr13 16574203 16574332 -103709980 - L1MA8 LINE L1 -128 6163 6029 1 711 6894 157 27 1 chr13 16574597 16575781 -103708531 - Lx2 LINE L1 0 6997 5783 1 711 7643 89 12 0 chr13 16575822 16577400 -103706912 - L1Md_F2 LINE L1 -12 6570 4967 1 711 816 168 6 0 chr13 16577395 16577556 -103706756 - L1_Mur2 LINE L1 -1612 4265 4104 1 711 1235 41 0 0 chr13 16577949 16578095 -103706217 + B1_Mm SINE Alu 2 147 0 1 711 408 228 0 0 chr13 16578137 16578251 -103706061 + (CA)n Simple_repeat Simple_repeat 2 115 0 1 711 240 59 0 0 chr13 16578251 16578285 -103706027 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 711 825 332 102 12 chr13 16578436 16578771 -103705541 + MLT1A0 LTR MaLR 1 365 0 1 711 1833 119 27 223 chr13 16579225 16579713 -103704599 + RLTR23 LTR ERV1 10 401 -29 1 711 268 236 0 0 chr13 16579801 16579873 -103704439 + T-rich Low_complexity Low_complexity 1 72 0 1 711 273 29 0 0 chr13 16580212 16580246 -103704066 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 711 2384 32 0 0 chr13 16582130 16582414 -103701898 + MTA_Mm LTR MaLR 1 284 -112 1 711 1052 168 41 129 chr13 16582414 16582755 -103701557 - RLTRETN_Mm LTR ERVK 0 322 12 1 711 958 26 0 8 chr13 16582760 16582878 -103701434 + MTA_Mm LTR MaLR 280 396 0 1 711 1054 110 95 0 chr13 16582878 16582910 -103701402 + MusHAL1 LINE L1 1127 1158 -2757 1 711 234 0 0 0 chr13 16582910 16582936 -103701376 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 711 15595 167 80 13 chr13 16582936 16586515 -103697797 + MusHAL1 LINE L1 1159 4978 -905 1 711 5676 129 16 1 chr13 16586503 16587406 -103696906 + Lx LINE L1 5732 6647 -7 1 711 606 296 0 0 chr13 16588612 16588747 -103695565 - B1_Mus1 SINE Alu 0 148 14 1 711 31 26 0 0 chr13 16589211 16589249 -103695063 + AT_rich Low_complexity Low_complexity 1 38 0 1 711 21 36 0 0 chr13 16590494 16590522 -103693790 + AT_rich Low_complexity Low_complexity 1 28 0 1 711 1038 76 20 20 chr13 16590620 16590767 -103693545 - B1_Mus1 SINE Alu 0 148 2 1 711 1854 199 24 12 chr13 16590803 16591283 -103693029 - RMER4B LTR ERVK 0 585 66 1 711 33916 34 1 0 chr13 16591653 16597713 -103686599 + L1Md_T LINE L1 1 5589 -297 1 711 9025 6 0 0 chr13 16597713 16598709 -103685603 + L1Md_T LINE L1 5590 6585 0 1 711 3141 85 31 9 chr13 16599700 16600151 -103684161 + L1_Mus3 LINE L1 6172 6632 -6 1 711 289 290 80 45 chr13 16600633 16600745 -103683567 + RLTR31_Mur LTR ERVK 438 553 0 1 711 226 314 100 0 chr13 16601259 16601329 -103682983 + MER105 DNA DNA 127 203 -1 1 711 265 0 24 48 chr13 16601462 16601504 -103682808 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 1 711 21 36 0 0 chr13 16601626 16601654 -103682658 + AT_rich Low_complexity Low_complexity 1 28 0 1 711 363 44 0 0 chr13 16602497 16602542 -103681770 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 711 829 306 16 65 chr13 16602940 16603324 -103680988 + Lx8 LINE L1 7103 7467 -6 1 711 207 0 0 0 chr13 16604436 16604459 -103679853 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 711 1234 163 46 5 chr13 16605865 16606081 -103678231 - ORR1A2 LTR MaLR -102 225 1 1 711 24 0 0 0 chr13 16606542 16606566 -103677746 + AT_rich Low_complexity Low_complexity 1 24 0 1 711 22 56 0 0 chr13 16606837 16606873 -103677439 + AT_rich Low_complexity Low_complexity 1 36 0 1 711 339 25 0 0 chr13 16607569 16607609 -103676703 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 711 216 255 20 0 chr13 16607831 16607882 -103676430 - RSINE1 SINE B4 -110 55 4 1 711 1086 88 0 7 chr13 16609052 16609200 -103675112 - B1_Mm SINE Alu 0 147 1 1 711 32 67 0 0 chr13 16609249 16609309 -103675003 + AT_rich Low_complexity Low_complexity 1 60 0 1 711 1639 242 66 79 chr13 16609617 16610405 -103673907 + L1_Mur3 LINE L1 3883 4660 -1220 1 711 306 229 0 24 chr13 16610397 16610482 -103673830 + L1_Mur3 LINE L1 4992 5074 -806 1 711 272 240 10 29 chr13 16610482 16610585 -103673727 + T-rich Low_complexity Low_complexity 4 104 0 1 711 933 236 36 23 chr13 16610795 16611098 -103673214 - Lx7 LINE L1 -1766 5930 5624 1 711 847 247 47 17 chr13 16611142 16611488 -103672824 + L1_Mur3 LINE L1 5230 5587 -299 1 711 24 67 0 0 chr13 16612243 16612288 -103672024 + AT_rich Low_complexity Low_complexity 1 45 0 1 711 21 71 0 0 chr13 16612323 16612365 -103671947 + AT_rich Low_complexity Low_complexity 1 42 0 1 711 284 217 48 0 chr13 16612530 16612613 -103671699 + (TCTG)n Simple_repeat Simple_repeat 2 88 0 1 711 769 96 27 18 chr13 16612630 16612855 -103671457 + (TCTCTG)n Simple_repeat Simple_repeat 1 227 0 1 711 432 0 0 0 chr13 16612870 16612918 -103671394 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 711 1044 94 6 0 chr13 16613381 16613541 -103670771 - L1_Mus2 LINE L1 0 6566 6406 1 711 1921 303 109 36 chr13 16613721 16614366 -103669946 + Lx8 LINE L1 6466 7140 -333 1 711 714 32 6 198 chr13 16614366 16614523 -103669789 + L1Md_F2 LINE L1 6456 6582 0 1 711 1921 303 109 36 chr13 16614523 16614791 -103669521 + Lx8 LINE L1 7141 7446 -27 1 711 996 15 0 8 chr13 16614810 16614941 -103669371 + L1Md_F3 LINE L1 6441 6570 -14 1 711 633 27 0 0 chr13 16614945 16615020 -103669292 + (GAA)n Simple_repeat Simple_repeat 2 76 0 1 711 5839 70 1 1 chr13 16615428 16616187 -103668125 - L1_Mus1 LINE L1 0 6567 5809 1 711 519 112 0 0 chr13 16616326 16616424 -103667888 + (A)n Simple_repeat Simple_repeat 1 98 0 1 711 352 290 171 12 chr13 16616447 16616611 -103667701 + MIR SINE MIR 2 191 -71 1 711 1799 249 48 15 chr13 16616764 16617164 -103667148 + MTD LTR MaLR 7 419 0 1 711 3189 226 159 68 chr13 16617172 16618309 -103666003 + MTD-int LTR MaLR 18 1258 0 1 711 1670 223 93 3 chr13 16618309 16618686 -103665626 + MTD LTR MaLR 1 411 -8 1 711 1299 103 223 0 chr13 16619950 16620174 -103664138 - L1Md_F2 LINE L1 -111 6471 6198 1 711 504 0 0 0 chr13 16620190 16620246 -103664066 + (GAAA)n Simple_repeat Simple_repeat 1 56 0 1 711 1179 117 0 0 chr13 16620246 16620426 -103663886 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 711 632 57 23 0 chr13 16620426 16620514 -103663798 + (GAAA)n Simple_repeat Simple_repeat 3 92 0 1 711 1307 76 10 10 chr13 16622166 16622365 -103661947 - L1Md_F2 LINE L1 0 6582 6384 1 711 1547 85 0 5 chr13 16622364 16622577 -103661735 + L1Md_F2 LINE L1 6357 6568 -14 1 711 381 273 109 122 chr13 16622735 16622861 -103661451 - MER2 DNA MER2_type -67 278 165 1 711 6256 72 7 2 chr13 16622861 16623685 -103660627 + L1_Mus2 LINE L1 5739 6566 0 1 711 381 273 109 122 chr13 16623685 16623796 -103660516 - MER2 DNA MER2_type -181 164 44 1 711 225 26 103 0 chr13 16624728 16624767 -103659545 - ORR1D2 LTR MaLR -2 368 326 1 711 19431 182 16 19 chr13 16624940 16629680 -103654632 + Lx LINE L1 548 5272 -614 1 711 9350 60 1 0 chr13 16629678 16630857 -103653455 + L1Md_F2 LINE L1 4407 5586 -297 1 711 8037 44 9 0 chr13 16630857 16631843 -103652469 + L1Md_F2 LINE L1 5587 6581 -1 1 711 6539 144 14 16 chr13 16631843 16633240 -103651072 + Lx LINE L1 5254 6653 -1 1 711 303 303 18 35 chr13 16633381 16633494 -103650818 + PB1D10 SINE Alu 1 111 -6 1 711 875 219 41 105 chr13 16633535 16633801 -103650511 - ORR1D1 LTR MaLR 0 374 126 1 711 2809 215 39 31 chr13 16633832 16634480 -103649832 - RMER13B LTR ERVK -36 872 220 1 711 355 195 0 99 chr13 16634496 16634587 -103649725 - RMER17B LTR ERVK -876 82 1 1 711 566 184 23 16 chr13 16634587 16634688 -103649624 - ORR1D1 LTR MaLR -272 98 1 1 711 353 335 124 62 chr13 16634816 16635138 -103649174 - ORR1E LTR MaLR -9 350 9 1 711 239 355 129 0 chr13 16636433 16636526 -103647786 - MER94 DNA AcHobo -28 106 2 1 711 1490 241 167 43 chr13 16636648 16637186 -103647126 + RMER20B LTR ERVK 2 606 -21 1 711 819 311 100 59 chr13 16637182 16637603 -103646709 - MLT2B1 LTR ERVL -82 438 1 1 711 1324 240 72 40 chr13 16637708 16638112 -103646200 + MTD LTR MaLR 1 417 -2 1 711 883 211 54 112 chr13 16638114 16638364 -103645948 + MTD-int LTR MaLR 1 250 -1008 1 711 412 250 76 0 chr13 16638364 16638496 -103645816 + B1_Mur2 SINE Alu 1 142 -7 1 711 883 211 54 112 chr13 16638496 16638509 -103645803 + MTD-int LTR MaLR 251 251 -1007 1 711 405 0 0 0 chr13 16638509 16638554 -103645758 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 1 711 883 211 54 112 chr13 16638554 16638583 -103645729 + MTD-int LTR MaLR 251 277 -981 1 711 1383 253 95 100 chr13 16638577 16639147 -103645165 + MTD-int LTR MaLR 676 1242 -16 1 711 981 75 7 15 chr13 16639147 16639283 -103645029 - RLTR27 LTR ERVK 0 309 175 1 711 1987 54 0 0 chr13 16639267 16639528 -103644784 - RLTR10A LTR ERVK -150 261 1 1 711 1421 229 93 39 chr13 16639552 16639772 -103644540 + MTD LTR MaLR 13 253 -166 1 711 816 105 0 0 chr13 16639772 16639915 -103644397 + (TC)n Simple_repeat Simple_repeat 2 144 0 1 711 279 0 0 0 chr13 16639915 16639945 -103644367 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 711 1421 229 93 39 chr13 16639945 16640109 -103644203 + MTD LTR MaLR 254 418 -1 1 711 21791 169 24 14 chr13 16640897 16644996 -103639316 - Lx LINE L1 -21 6633 2491 1 711 2687 49 0 0 chr13 16644996 16645325 -103638987 - L1Md_T LINE L1 0 6582 6254 1 88 21791 179 10 15 chr13 16645325 16646275 -103638037 - Lx LINE L1 -3393 2490 1550 1 712 420 20 0 0 chr13 16646275 16646324 -103637988 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 712 2256 202 79 40 chr13 16646333 16646946 -103637366 + RMER19B LTR ERVK 21 902 0 1 712 344 178 44 106 chr13 16647043 16647156 -103637156 - Lx9 LINE L1 -1 7643 7538 1 712 495 288 75 6 chr13 16647867 16648028 -103636284 + MTEb LTR MaLR 1 172 -207 1 712 946 252 146 7 chr13 16648031 16648339 -103635973 + ORR1D1 LTR MaLR 3 353 -21 1 712 521 250 117 44 chr13 16648355 16648535 -103635777 + MTEb LTR MaLR 187 379 0 1 712 198 338 54 0 chr13 16650322 16650396 -103633916 + L2a LINE L2 3016 3093 -333 1 712 290 309 21 0 chr13 16650576 16650670 -103633642 - MLT1A LTR MaLR -8 366 271 1 712 13849 174 58 63 chr13 16650717 16650732 -103633580 + L1_Mur3 LINE L1 2046 2059 -3821 1 712 333 0 0 0 chr13 16650732 16650769 -103633543 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 712 13849 174 58 63 chr13 16650769 16653923 -103630389 + L1_Mur3 LINE L1 2060 5297 -583 1 712 2299 128 81 28 chr13 16653923 16654358 -103629954 + Lx2B LINE L1 6541 6998 -2 1 712 13849 174 58 63 chr13 16654358 16654636 -103629676 + L1_Mur3 LINE L1 5298 5475 -405 1 712 246 347 90 39 chr13 16654636 16654792 -103629520 - MLT1A LTR MaLR -188 186 23 1 712 381 337 87 0 chr13 16654851 16655023 -103629289 - MER45B DNA Tip100 -646 394 208 1 712 2654 184 8 15 chr13 16655084 16655609 -103628703 + Lx4B LINE L1 6534 7054 -4 1 712 468 0 0 0 chr13 16655626 16655678 -103628634 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 712 307 275 39 39 chr13 16655718 16655896 -103628416 + Lx9 LINE L1 7382 7559 -85 2 712 212 298 8 15 chr13 16655974 16656107 -103628205 + (CAAA)n Simple_repeat Simple_repeat 1 132 0 2 712 224 213 21 0 chr13 16656001 16656048 -103628264 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 712 24 0 0 0 chr13 16657201 16657225 -103627087 + AT_rich Low_complexity Low_complexity 1 24 0 2 712 351 0 0 0 chr13 16657729 16657768 -103626544 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 712 283 256 51 13 chr13 16658681 16658760 -103625552 + PB1D10 SINE Alu 28 109 -8 2 712 1755 204 25 19 chr13 16659351 16659716 -103624596 + ORR1B2 LTR MaLR 1 367 0 2 712 6213 213 64 11 chr13 16659717 16661043 -103623269 + ORR1B2-int LTR MaLR 2 1403 -106 2 712 3842 35 0 0 chr13 16661043 16661500 -103622812 - L1Md_T LINE L1 0 6582 6126 2 712 6213 213 64 11 chr13 16661500 16661605 -103622707 + ORR1B2-int LTR MaLR 1404 1508 -1 2 712 574 281 20 20 chr13 16661711 16661860 -103622452 + B3A SINE B2 1 149 -49 2 712 252 0 0 0 chr13 16661881 16661909 -103622403 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 712 984 117 0 0 chr13 16663442 16663605 -103620707 + (TG)n Simple_repeat Simple_repeat 1 163 0 2 712 862 286 82 19 chr13 16664665 16664982 -103619330 - MER2 DNA MER2_type -1 344 8 2 712 257 300 50 0 chr13 16665035 16665095 -103619217 + RSINE1 SINE B4 2 64 -101 2 712 204 97 0 0 chr13 16665194 16665225 -103619087 + (TC)n Simple_repeat Simple_repeat 2 32 0 2 712 234 346 0 10 chr13 16666597 16666699 -103617613 + MIRc SINE MIR 151 251 -17 2 712 429 20 0 0 chr13 16667028 16667078 -103617234 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 712 410 265 58 12 chr13 16667936 16668077 -103616235 + ORR1E LTR MaLR 27 194 -190 2 712 332 49 0 32 chr13 16668198 16668261 -103616051 - L1Md_F2 LINE L1 0 6582 6522 2 712 306 0 0 0 chr13 16668380 16668414 -103615898 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 712 225 0 0 0 chr13 16668719 16668744 -103615568 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 2 712 411 38 0 0 chr13 16668745 16668798 -103615514 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 712 363 23 0 0 chr13 16668798 16668841 -103615471 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 712 462 317 73 0 chr13 16668843 16668966 -103615346 - RSINE1 SINE B4 -29 136 5 2 712 362 290 68 68 chr13 16669747 16669880 -103614432 + B3 SINE B2 1 133 -83 2 712 939 35 0 0 chr13 16669886 16670001 -103614311 + (CA)n Simple_repeat Simple_repeat 2 116 0 2 712 24 0 0 0 chr13 16670427 16670451 -103613861 + AT_rich Low_complexity Low_complexity 1 24 0 2 712 1069 273 38 16 chr13 16671576 16671889 -103612423 + RCHARR1 DNA MER1_type 34 353 -621 2 712 359 351 63 5 chr13 16671942 16672131 -103612181 - MLT1A0 LTR MaLR -35 330 131 2 712 277 215 0 122 chr13 16672884 16672974 -103611338 + B1F SINE Alu 3 81 -68 2 712 552 53 0 0 chr13 16673870 16673946 -103610366 + (TG)n Simple_repeat Simple_repeat 2 77 0 2 712 327 146 0 0 chr13 16674447 16674502 -103609810 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 712 490 309 0 0 chr13 16674672 16674795 -103609517 + B1_Mur1 SINE Alu 5 127 -22 2 712 471 271 8 0 chr13 16675110 16675232 -103609080 - Lx9 LINE L1 -325 7319 7197 2 712 364 192 66 19 chr13 16675236 16675342 -103608970 + Lx9 LINE L1 7317 7427 -217 2 712 25 65 0 0 chr13 16675420 16675466 -103608846 + AT_rich Low_complexity Low_complexity 1 46 0 2 712 338 223 55 5 chr13 16676261 16676348 -103607964 - B3A SINE B2 -108 108 20 2 712 309 117 0 0 chr13 16676761 16676821 -103607491 + (T)n Simple_repeat Simple_repeat 1 60 0 2 712 186 43 0 0 chr13 16677603 16677626 -103606686 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2 712 315 0 0 0 chr13 16677647 16677682 -103606630 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 712 2026 163 41 8 chr13 16677944 16678309 -103606003 - ORR1C1 LTR MaLR -1 377 1 2 712 28 29 0 0 chr13 16678699 16678734 -103605578 + AT_rich Low_complexity Low_complexity 1 35 0 2 712 1103 288 45 32 chr13 16678820 16679606 -103604706 + L1MA4 LINE L1 5104 5902 -398 2 712 22 35 0 0 chr13 16679920 16679949 -103604363 + AT_rich Low_complexity Low_complexity 1 29 0 2 712 199 228 8 31 chr13 16679952 16680079 -103604233 + (TA)n Simple_repeat Simple_repeat 2 125 0 2 712 2021 286 35 46 chr13 16680181 16680917 -103603395 - Lx8 LINE L1 -607 7089 6371 2 712 288 228 216 48 chr13 16681004 16681165 -103603147 - Lx8 LINE L1 -1484 6212 6023 2 712 444 301 193 0 chr13 16681352 16681518 -103602794 + B4 SINE B4 19 216 -76 2 712 209 57 0 28 chr13 16681540 16681576 -103602736 + (TAA)n Simple_repeat Simple_repeat 1 35 0 2 712 190 290 84 28 chr13 16681684 16681755 -103602557 - L3 LINE CR1 -3539 950 876 2 712 208 289 108 32 chr13 16681804 16681897 -103602415 + MER5B DNA MER1_type 11 110 -68 2 712 6485 39 5 38 chr13 16682769 16683606 -103600706 - L1Md_F3 LINE L1 0 6584 5776 2 712 276 342 27 27 chr13 16683663 16683774 -103600538 - MTE2b LTR MaLR -14 365 255 2 712 521 88 12 0 chr13 16684427 16684507 -103599805 + (TC)n Simple_repeat Simple_repeat 2 82 0 2 712 391 121 0 78 chr13 16684956 16685046 -103599266 - Lx2A LINE L1 -1 7007 6925 2 712 8672 146 34 21 chr13 16685047 16687666 -103596646 - Lx2A LINE L1 -40 6968 4310 2 712 231 283 35 17 chr13 16688076 16688191 -103596121 - L1M5 LINE L1 -2483 3663 3547 2 712 380 313 101 13 chr13 16688435 16688584 -103595728 - RSINE1 SINE B4 -1 164 3 2 712 24 0 0 0 chr13 16688680 16688704 -103595608 + AT_rich Low_complexity Low_complexity 1 24 0 2 712 585 309 96 26 chr13 16689771 16690000 -103594312 - B4A SINE B4 -47 245 1 2 712 25 31 0 0 chr13 16690192 16690224 -103594088 + AT_rich Low_complexity Low_complexity 1 32 0 2 712 19392 2 1 0 chr13 16690297 16693164 -103591148 - L1Md_A LINE L1 0 6582 3713 2 712 36243 14 42 3 chr13 16693172 16699856 -103584456 - L1Md_T LINE L1 0 6582 1 2 712 229 233 13 64 chr13 16700098 16700176 -103584136 + MADE2 DNA Mariner 6 79 -1 2 712 219 69 0 0 chr13 16700793 16700822 -103583490 + (T)n Simple_repeat Simple_repeat 1 29 0 2 712 622 373 10 20 chr13 16700864 16701157 -103583155 + B4A SINE B4 1 290 -2 2 712 413 274 68 8 chr13 16701583 16701850 -103582462 - L1MA6 LINE L1 -207 6093 5798 2 712 31787 84 15 4 chr13 16702014 16707163 -103577149 + L1Md_F2 LINE L1 380 5585 -298 2 712 7426 79 0 8 chr13 16707164 16708149 -103576163 + L1Md_F2 LINE L1 5587 6563 -19 2 712 548 329 84 69 chr13 16708484 16708830 -103575482 + ORR1E LTR MaLR 7 357 -2 2 712 347 361 34 0 chr13 16709059 16709178 -103575134 + MIR SINE MIR 23 145 -117 2 712 184 322 34 0 chr13 16709401 16709460 -103574852 + L2c LINE L2 3283 3343 -44 2 712 2946 45 32 0 chr13 16709465 16709841 -103574471 - RLTR10 LTR ERVK -2 388 1 2 712 279 146 0 0 chr13 16710431 16710486 -103573826 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2 712 240 35 0 0 chr13 16710583 16710612 -103573700 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 2 712 528 331 75 52 chr13 16710811 16711206 -103573106 + RLTR16 LTR ERVK 31 436 -256 2 712 615 92 0 0 chr13 16711586 16711673 -103572639 + (GGAA)n Simple_repeat Simple_repeat 3 89 0 2 712 1243 218 139 54 chr13 16711715 16712083 -103572229 + RMER13B LTR ERVK 510 908 0 2 712 301 248 111 28 chr13 16712482 16712590 -103571722 + MLT1A1 LTR MaLR 3 119 -289 2 712 234 194 0 16 chr13 16712670 16712733 -103571579 + T-rich Low_complexity Low_complexity 3 64 0 2 712 336 48 0 0 chr13 16712828 16712870 -103571442 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 712 351 0 0 0 chr13 16713053 16713092 -103571220 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 712 186 350 57 24 chr13 16713191 16713314 -103570998 - MIR SINE MIR 0 262 136 2 712 1206 98 11 0 chr13 16713324 16713508 -103570804 - L1Md_F2 LINE L1 0 6582 6397 2 712 4645 132 11 20 chr13 16713908 16715203 -103569109 + L1Md_A LINE L1 446 1682 -4201 2 712 4957 59 11 6 chr13 16715198 16715831 -103568481 - L1Md_F2 LINE L1 -47 6535 5900 2 712 473 178 26 49 chr13 16715831 16715947 -103568365 - RLTR20D LTR ERVK -415 90 1 2 712 601 173 40 35 chr13 16716276 16716441 -103567871 + B3 SINE B2 1 179 -14 2 712 780 11 0 0 chr13 16716445 16716534 -103567778 + (GAA)n Simple_repeat Simple_repeat 2 90 0 2 712 498 295 77 5 chr13 16719154 16719375 -103564937 - L1ME1 LINE L1 -102 6077 5841 2 712 354 23 0 0 chr13 16721520 16721563 -103562749 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 712 1156 81 0 0 chr13 16722197 16722345 -103561967 + B1_Mus1 SINE Alu 1 148 0 2 712 232 290 0 28 chr13 16722523 16722594 -103561718 + MIR SINE MIR 167 235 -27 2 712 6000 71 8 6 chr13 16723209 16723990 -103560322 - L1_Mus1 LINE L1 -1 6566 5785 2 712 305 318 104 36 chr13 16724717 16725016 -103559296 - ORR1E LTR MaLR 0 359 41 2 712 347 355 16 8 chr13 16725507 16725629 -103558683 + MTE2b LTR MaLR 1 123 -256 2 712 596 235 47 20 chr13 16725641 16725839 -103558473 + MTE2b LTR MaLR 172 379 0 2 712 295 299 83 78 chr13 16725982 16726020 -103558292 + ID_B1 SINE B4 1 115 -177 2 712 354 268 42 89 chr13 16726020 16726096 -103558216 + MT2B LTR ERVL 88 155 -446 2 712 611 177 0 0 chr13 16726096 16726192 -103558120 + B1_Mus1 SINE Alu 2 97 -51 2 712 295 299 83 78 chr13 16726192 16726225 -103558087 + ID_B1 SINE B4 116 223 -69 2 712 483 262 46 38 chr13 16726336 16726467 -103557845 + MT2A LTR ERVL 1 132 -401 2 712 287 136 23 0 chr13 16726497 16726541 -103557771 + MT2A LTR ERVL 94 138 -395 2 712 2195 204 31 16 chr13 16726552 16727000 -103557312 + MERVL_2A-int LTR ERVL 3678 4132 -1629 2 712 1925 194 36 10 chr13 16727094 16727480 -103556832 + MERVL_2A-int LTR ERVL 4126 4521 -1240 2 712 1165 61 0 0 chr13 16732294 16732441 -103551871 - B1_Mus2 SINE Alu 0 147 1 2 712 1524 53 34 0 chr13 16732468 16732674 -103551638 - L1Md_F2 LINE L1 -2 6580 6368 2 712 256 250 214 8 chr13 16735535 16735652 -103548660 + Charlie4a DNA MER1_type 362 502 -6 3 712 192 97 0 0 chr13 16736996 16737027 -103547285 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 712 219 69 0 0 chr13 16739127 16739156 -103545156 + (A)n Simple_repeat Simple_repeat 1 29 0 3 712 280 352 45 103 chr13 16739662 16739817 -103544495 - LTR33A_ LTR ERVL -289 242 97 3 712 367 329 141 13 chr13 16740304 16740538 -103543774 - Lx8 LINE L1 -8 7465 7202 3 712 200 303 98 27 chr13 16742143 16742255 -103542057 + L2a LINE L2 3303 3422 -4 3 712 204 40 0 0 chr13 16742729 16742754 -103541558 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 712 228 67 0 0 chr13 16743251 16743281 -103541031 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 712 331 301 72 22 chr13 16743290 16743429 -103540883 - RSINE1 SINE B4 -15 150 5 3 712 429 276 43 0 chr13 16743781 16743897 -103540415 + MER20 DNA MER1_type 7 127 -92 3 712 24 0 0 0 chr13 16744455 16744479 -103539833 + AT_rich Low_complexity Low_complexity 1 24 0 3 712 225 209 0 0 chr13 16747552 16747595 -103536717 + T-rich Low_complexity Low_complexity 1 43 0 3 712 37 39 0 0 chr13 16748934 16748985 -103535327 + AT_rich Low_complexity Low_complexity 1 51 0 3 712 243 289 71 24 chr13 16750728 16750813 -103533499 + MER103 DNA DNA 20 108 -58 3 712 537 296 38 54 chr13 16753160 16753346 -103530966 + MIR3 SINE MIR 17 199 -9 3 712 378 280 117 60 chr13 16754060 16754326 -103529986 - HAL1 LINE L1 -203 2304 2024 3 712 405 0 0 0 chr13 16754419 16754464 -103529848 + (GTTTG)n Simple_repeat Simple_repeat 4 48 0 3 712 241 316 66 22 chr13 16754467 16754603 -103529709 - HAL1 LINE L1 -651 1856 1715 3 712 189 107 0 0 chr13 16754704 16754732 -103529580 + (T)n Simple_repeat Simple_repeat 1 28 0 3 712 225 0 0 0 chr13 16755294 16755319 -103528993 + (T)n Simple_repeat Simple_repeat 1 25 0 3 712 22 88 0 0 chr13 16755505 16755562 -103528750 + AT_rich Low_complexity Low_complexity 1 57 0 3 712 411 21 0 0 chr13 16755583 16755631 -103528681 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 712 439 325 26 13 chr13 16755851 16756007 -103528305 - MER82 DNA MER2_type -495 158 1 3 712 252 143 0 0 chr13 16756327 16756369 -103527943 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 712 31 44 0 0 chr13 16756445 16756490 -103527822 + AT_rich Low_complexity Low_complexity 1 45 0 3 712 1735 311 79 49 chr13 16756503 16758225 -103526087 - Lx8 LINE L1 -839 6634 4867 3 712 400 303 106 35 chr13 16758244 16758613 -103525699 - Lx8 LINE L1 -1187 4693 4299 3 712 339 348 45 0 chr13 16758618 16758773 -103525539 + L1MCa LINE L1 143 304 -6204 3 712 258 240 80 0 chr13 16758783 16758858 -103525454 + L1MCa LINE L1 1474 1554 -4954 3 712 296 349 8 37 chr13 16758972 16759106 -103525206 + Lx8 LINE L1 6433 6562 -911 3 712 2084 28 4 0 chr13 16760865 16761113 -103523199 - L1_Mus1 LINE L1 0 6567 6319 3 712 393 81 0 0 chr13 16762504 16762566 -103521746 + (A)n Simple_repeat Simple_repeat 1 62 0 3 712 330 26 0 0 chr13 16763832 16763871 -103520441 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 712 691 283 13 7 chr13 16763873 16764026 -103520286 - B3A SINE B2 -44 154 1 3 712 218 374 0 0 chr13 16764030 16764121 -103520191 + L2 LINE L2 2262 2352 -1067 3 712 349 369 81 18 chr13 16764778 16765062 -103519250 + L1MC1 LINE L1 1 302 -6206 3 712 292 313 71 0 chr13 16765151 16765250 -103519062 + RMER15-int LTR ERVL 4152 4257 -742 3 712 733 315 11 42 chr13 16765260 16765545 -103518767 + Lx8 LINE L1 6432 6707 -766 3 712 580 311 92 23 chr13 16765596 16765899 -103518413 + Lx8 LINE L1 6932 7255 -218 3 712 673 278 43 28 chr13 16765928 16766261 -103518051 + MT2A LTR ERVL 130 601 0 3 712 21 0 0 0 chr13 16766442 16766463 -103517849 + AT_rich Low_complexity Low_complexity 1 21 0 3 712 335 324 20 13 chr13 16766579 16766729 -103517583 + L1MC1 LINE L1 4029 4179 -2142 3 712 372 193 0 0 chr13 16766940 16767049 -103517263 + A-rich Low_complexity Low_complexity 1 109 0 3 712 652 261 5 21 chr13 16767141 16767333 -103516979 + L1MC1 LINE L1 5889 6077 -431 3 712 1278 204 105 68 chr13 16767387 16767739 -103516573 - ORR1C2 LTR MaLR -12 372 8 3 712 355 392 0 40 chr13 16767745 16767918 -103516394 + L1MC1 LINE L1 6122 6287 -232 3 712 597 203 78 8 chr13 16769155 16769284 -103515028 + MTD LTR MaLR 268 405 -14 3 712 21 36 0 0 chr13 16770470 16770498 -103513814 + AT_rich Low_complexity Low_complexity 1 28 0 3 712 360 0 0 0 chr13 16770829 16770869 -103513443 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 712 564 188 0 0 chr13 16771564 16771692 -103512620 + (TG)n Simple_repeat Simple_repeat 2 129 0 3 712 204 278 25 42 chr13 16771692 16771812 -103512500 + (TATATG)n Simple_repeat Simple_repeat 6 123 0 3 712 327 331 26 0 chr13 16771877 16772028 -103512284 + (TATG)n Simple_repeat Simple_repeat 2 156 0 3 712 279 0 0 0 chr13 16772722 16772753 -103511559 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 712 466 324 122 65 chr13 16772961 16773453 -103510859 + Charlie1b DNA MER1_type 4 523 0 3 712 231 36 0 0 chr13 16774588 16774616 -103509696 + (TC)n Simple_repeat Simple_repeat 2 29 0 3 712 206 302 38 0 chr13 16774818 16774871 -103509441 + MIR SINE MIR 26 80 -182 3 712 23 78 0 0 chr13 16774979 16775030 -103509282 + AT_rich Low_complexity Low_complexity 1 51 0 3 712 243 0 0 0 chr13 16775232 16775259 -103509053 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 3 713 459 125 0 0 chr13 16777291 16777363 -103506949 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 713 1440 221 31 15 chr13 16777370 16777697 -103506615 - Lx7 LINE L1 -425 7271 6940 3 713 521 212 85 0 chr13 16777710 16777828 -103506484 - Lx7 LINE L1 -1156 6540 6413 3 713 2928 47 0 3 chr13 16777825 16778207 -103506105 + L1_Mus1 LINE L1 5628 6008 -559 3 713 1205 69 0 44 chr13 16778208 16778391 -103505921 + L1Md_F2 LINE L1 6407 6581 -1 3 713 4274 69 12 9 chr13 16778390 16778958 -103505354 + L1_Mus1 LINE L1 5998 6567 0 3 713 2996 213 60 6 chr13 16778977 16779661 -103504651 - Lx7 LINE L1 -801 6895 6175 3 713 444 229 10 10 chr13 16779655 16779752 -103504560 + Lx7 LINE L1 6408 6504 -1192 3 713 255 31 0 0 chr13 16779768 16779800 -103504512 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 713 526 284 51 22 chr13 16779802 16780076 -103504236 - Lx7 LINE L1 -1528 6168 5887 3 713 1687 296 101 21 chr13 16780388 16781192 -103503120 - Lx9 LINE L1 -470 7174 6307 3 713 7029 120 18 3 chr13 16781479 16783189 -103501123 + Lx LINE L1 4924 6654 0 3 713 1218 244 13 3 chr13 16783204 16783504 -103500808 - L1_Rod LINE L1 0 5847 5545 3 713 490 200 100 0 chr13 16783617 16783737 -103500575 - ORR1D1 LTR MaLR -4 370 239 3 713 921 295 19 8 chr13 16783802 16784062 -103500250 + B4A SINE B4 5 267 -25 3 713 25 0 0 0 chr13 16784857 16784882 -103499430 + AT_rich Low_complexity Low_complexity 1 25 0 3 713 333 255 96 19 chr13 16785068 16785172 -103499140 - PB1D9 SINE Alu 0 120 9 3 713 367 180 139 10 chr13 16786416 16786517 -103497795 + MER121 Unknown Unknown 91 204 -208 3 713 3464 40 5 2 chr13 16788928 16789349 -103494963 + L1Md_F3 LINE L1 6161 6582 -2 3 713 273 221 87 14 chr13 16789473 16789542 -103494770 - RSINE1 SINE B4 -77 88 15 3 713 791 193 12 0 chr13 16790560 16790731 -103493581 + CT-rich Low_complexity Low_complexity 3 175 0 3 713 658 301 55 0 chr13 16792052 16792251 -103492061 + B3 SINE B2 1 210 -6 3 713 392 0 21 0 chr13 16792396 16792444 -103491868 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 713 21 0 0 0 chr13 16793963 16793984 -103490328 + AT_rich Low_complexity Low_complexity 1 21 0 3 713 236 258 15 0 chr13 16795695 16795761 -103488551 + GA-rich Low_complexity Low_complexity 2 68 0 3 713 33 0 0 0 chr13 16797332 16797365 -103486947 + AT_rich Low_complexity Low_complexity 1 33 0 3 713 752 90 21 50 chr13 16797366 16797506 -103486806 - L1Md_F2 LINE L1 -3 6579 6444 3 713 282 341 37 7 chr13 16798083 16798219 -103486093 + B1F1 SINE Alu 1 140 -9 3 713 338 117 33 0 chr13 16798251 16798311 -103486001 + (GGGAGA)n Simple_repeat Simple_repeat 4 65 0 3 713 279 0 0 0 chr13 16798467 16798498 -103485814 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 713 231 349 54 31 chr13 16798693 16798823 -103485489 + MIRb SINE MIR 23 155 -113 3 713 1120 248 92 6 chr13 16798856 16799206 -103485106 + MTD LTR MaLR 6 419 -2 3 713 408 40 0 0 chr13 16799820 16799870 -103484442 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 713 2516 276 80 55 chr13 16799870 16800279 -103484033 - L1_Mus2 LINE L1 -12 7046 6638 3 713 3426 35 2 0 chr13 16800279 16800674 -103483638 + MTA_Mm LTR MaLR 1 396 0 3 713 6898 60 15 5 chr13 16800674 16801624 -103482688 - L1_Mus2 LINE L1 -421 6637 5653 3 713 224 30 0 29 chr13 16803783 16803817 -103480495 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 3 713 209 340 9 48 chr13 16804301 16804406 -103479906 - L2 LINE L2 -953 2466 2366 3 713 298 259 139 0 chr13 16805736 16805844 -103478468 + MIR SINE MIR 107 229 -33 3 713 364 352 71 15 chr13 16806792 16806988 -103477324 - MER20 DNA MER1_type -5 214 8 3 713 485 32 16 0 chr13 16807978 16808041 -103476271 + (TTC)n Simple_repeat Simple_repeat 3 66 0 3 713 552 68 0 0 chr13 16808041 16808114 -103476198 + (TC)n Simple_repeat Simple_repeat 2 74 0 3 713 258 95 0 0 chr13 16808948 16808990 -103475322 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 713 2415 219 41 11 chr13 16810874 16811405 -103472907 + Lx5 LINE L1 6501 7047 -3 3 713 730 287 68 50 chr13 16813225 16813445 -103470867 - B4 SINE B4 -64 228 5 3 713 520 294 35 42 chr13 16813609 16813921 -103470391 - L1MB2 LINE L1 -214 5957 5648 3 713 216 0 0 0 chr13 16814051 16814075 -103470237 + (TC)n Simple_repeat Simple_repeat 1 24 0 3 713 300 50 0 0 chr13 16814075 16814109 -103470203 + (TTC)n Simple_repeat Simple_repeat 2 35 0 3 713 468 51 0 0 chr13 16814109 16814168 -103470144 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 3 713 288 215 54 35 chr13 16814242 16814337 -103469975 - MTEb LTR MaLR -5 374 278 3 713 501 17 0 0 chr13 16814422 16814480 -103469832 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 713 267 344 10 41 chr13 16814580 16814677 -103469635 - MLT1A1 LTR MaLR -284 124 31 3 713 672 275 79 84 chr13 16814840 16814921 -103469391 - L1M4 LINE L1 -1015 5131 5051 3 713 1978 174 80 0 chr13 16814921 16815284 -103469028 + ORR1B1 LTR MaLR 3 394 0 4 713 672 275 79 84 chr13 16815284 16815619 -103468693 - L1M4 LINE L1 -1096 5050 4717 3 713 228 319 14 0 chr13 16816578 16816650 -103467662 + (CATA)n Simple_repeat Simple_repeat 2 74 0 4 713 396 0 0 0 chr13 16818166 16818210 -103466102 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 713 13613 25 194 0 chr13 16819660 16822310 -103462002 - L1Md_T LINE L1 -1 6581 3418 4 713 24 0 0 0 chr13 16822315 16822339 -103461973 + AT_rich Low_complexity Low_complexity 1 24 0 4 713 884 207 108 0 chr13 16822339 16822542 -103461770 - Lx4A LINE L1 -2 7056 6832 4 713 2026 71 7 0 chr13 16822542 16822825 -103461487 + Lx4A LINE L1 5667 5951 -1107 4 713 244 280 54 62 chr13 16822841 16822979 -103461333 - MIRm SINE MIR -106 156 27 4 713 599 237 21 14 chr13 16823171 16823312 -103461000 - B1F2 SINE Alu -7 142 1 4 713 1222 65 0 9 chr13 16826123 16826349 -103457963 + (TG)n Simple_repeat Simple_repeat 1 223 0 4 713 1999 268 41 36 chr13 16826429 16827402 -103456910 - L1_Mur3 LINE L1 -1221 4659 3682 4 713 423 0 0 0 chr13 16827422 16827469 -103456843 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 713 292 271 69 15 chr13 16829100 16829231 -103455081 + L1MC2 LINE L1 5709 5846 -498 4 713 716 283 22 11 chr13 16829240 16829412 -103454900 + B3 SINE B2 2 176 -40 4 713 342 0 0 0 chr13 16829412 16829450 -103454862 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 713 486 0 0 0 chr13 16829474 16829528 -103454784 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 713 559 263 90 39 chr13 16829585 16829897 -103454415 + L1MC2 LINE L1 5866 6193 -151 4 713 184 314 100 45 chr13 16831115 16831225 -103453087 - MIRb SINE MIR -48 220 105 4 713 6864 61 9 23 chr13 16832059 16832182 -103452130 + RLTR13B1 LTR ERVK 1 125 -768 4 713 2398 50 0 3 chr13 16832182 16832485 -103451827 + L1Md_F2 LINE L1 6270 6571 -11 4 713 6864 61 9 23 chr13 16832485 16833267 -103451045 + RLTR13B1 LTR ERVK 126 893 0 4 713 218 32 0 31 chr13 16833920 16833952 -103450360 + (TTTTC)n Simple_repeat Simple_repeat 1 31 0 4 713 22 0 0 0 chr13 16834078 16834100 -103450212 + AT_rich Low_complexity Low_complexity 1 22 0 4 713 32 67 0 0 chr13 16834331 16834391 -103449921 + AT_rich Low_complexity Low_complexity 1 60 0 4 713 297 0 0 0 chr13 16834512 16834545 -103449767 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 713 802 268 56 46 chr13 16834721 16835324 -103448988 - L1_Rod LINE L1 -2664 3183 2575 4 713 360 348 17 0 chr13 16835701 16835816 -103448496 + PB1D10 SINE Alu 1 117 0 4 713 288 174 35 11 chr13 16835856 16835943 -103448369 + A-rich Low_complexity Low_complexity 2 90 0 4 713 2062 142 6 0 chr13 16836240 16836565 -103447747 + ORR1A2 LTR MaLR 1 327 0 4 713 1475 51 5 25 chr13 16836721 16836922 -103447390 - L1Md_F2 LINE L1 0 6582 6386 4 713 327 49 0 0 chr13 16837000 16837041 -103447271 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 4 713 195 69 0 0 chr13 16837139 16837168 -103447144 + (TTGG)n Simple_repeat Simple_repeat 2 30 0 4 713 444 315 39 0 chr13 16838642 16838769 -103445543 - B1_Mur1 SINE Alu -17 132 1 4 713 25 0 0 0 chr13 16838772 16838797 -103445515 + AT_rich Low_complexity Low_complexity 1 25 0 4 713 511 353 0 13 chr13 16838820 16838907 -103445405 + B4A SINE B4 1 85 -207 4 713 222 395 25 0 chr13 16838907 16838988 -103445324 + B1F SINE Alu 1 83 -66 4 713 279 0 0 0 chr13 16839046 16839077 -103445235 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 713 303 206 26 84 chr13 16839082 16839273 -103445039 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 4 713 366 156 0 0 chr13 16839273 16839337 -103444975 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 713 277 253 48 30 chr13 16839382 16839549 -103444763 + (CATA)n Simple_repeat Simple_repeat 4 173 0 4 713 21 36 0 0 chr13 16839747 16839775 -103444537 + AT_rich Low_complexity Low_complexity 1 28 0 4 713 200 353 25 25 chr13 16840942 16841064 -103443248 + MIR SINE MIR 126 247 -15 4 713 1132 324 25 27 chr13 16841752 16842117 -103442195 - MTEb LTR MaLR 0 379 16 4 713 480 77 0 0 chr13 16842315 16842380 -103441932 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 713 419 231 132 50 chr13 16842647 16842787 -103441525 - Lx9 LINE L1 -10 7634 7480 4 713 243 61 0 0 chr13 16842787 16842820 -103441492 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 713 419 231 132 50 chr13 16842820 16842861 -103441451 - Lx9 LINE L1 -165 7479 7439 4 713 307 262 12 0 chr13 16843148 16843232 -103441080 - L1MC3 LINE L1 -221 7564 7480 4 713 276 290 0 0 chr13 16843918 16843980 -103440332 - MLT1H1 LTR MaLR 0 555 494 4 713 230 345 117 75 chr13 16844218 16844431 -103439881 - MLT1H1 LTR MaLR -333 258 37 4 713 212 254 34 0 chr13 16844587 16844646 -103439666 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 4 713 229 301 140 0 chr13 16846813 16846906 -103437406 - MER5A1 DNA MER1_type -3 163 58 4 713 231 386 0 0 chr13 16846956 16847026 -103437286 - tRNA-Ala-GCY_ tRNA tRNA -3 72 3 4 713 378 12 21 85 chr13 16847039 16847133 -103437179 + (CAAAAA)n Simple_repeat Simple_repeat 3 90 0 4 713 576 0 0 0 chr13 16847595 16847659 -103436653 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 4 713 196 309 46 99 chr13 16848380 16848531 -103435781 - L2a LINE L2 -51 3375 3233 4 713 393 228 0 0 chr13 16848582 16848783 -103435529 + (TG)n Simple_repeat Simple_repeat 1 201 0 4 713 477 256 62 8 chr13 16848786 16848916 -103435396 - RSINE1 SINE B4 0 165 29 4 713 615 279 36 130 chr13 16849024 16849354 -103434958 - MT2A LTR ERVL -230 303 5 4 713 294 98 0 0 chr13 16852495 16852546 -103431766 + (A)n Simple_repeat Simple_repeat 1 51 0 4 713 414 0 0 0 chr13 16855333 16855379 -103428933 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 713 321 169 0 0 chr13 16855638 16855697 -103428615 + T-rich Low_complexity Low_complexity 1 59 0 4 713 220 333 13 13 chr13 16855986 16856065 -103428247 - MIR SINE MIR -4 258 180 4 713 210 365 75 0 chr13 16856134 16856214 -103428098 + MIRc SINE MIR 59 147 -121 4 713 495 87 0 0 chr13 16857730 16857799 -103426513 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 713 234 0 0 0 chr13 16858071 16858097 -103426215 + (A)n Simple_repeat Simple_repeat 1 26 0 4 713 180 0 0 0 chr13 16858396 16858416 -103425896 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 4 713 471 252 20 48 chr13 16858623 16858769 -103425543 - B1_Mur1 SINE Alu -5 144 3 4 713 30 0 0 0 chr13 16858833 16858863 -103425449 + AT_rich Low_complexity Low_complexity 1 30 0 4 713 195 313 29 15 chr13 16859809 16859877 -103424435 + MER5B DNA MER1_type 27 95 -83 4 713 180 0 0 0 chr13 16860220 16860240 -103424072 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 713 1493 121 19 9 chr13 16860240 16860560 -103423752 - Lx3_Mus LINE L1 -876 6124 5833 4 713 453 169 0 0 chr13 16862508 16862591 -103421721 + A-rich Low_complexity Low_complexity 1 83 0 4 713 331 313 0 0 chr13 16862936 16863019 -103421293 + AmnSINE1 SINE SINE 1 83 -492 4 713 229 298 97 11 chr13 16863020 16863166 -103421146 - L2b LINE L2 -13 3413 3248 4 713 329 219 0 0 chr13 16863992 16864056 -103420256 + MER5A1 DNA MER1_type 99 162 -4 4 713 480 215 172 27 chr13 16864351 16864504 -103419808 - ORR1D2 LTR MaLR 0 370 205 4 713 352 340 55 65 chr13 16865573 16865790 -103418522 - RMER15 LTR ERVL -13 562 348 4 713 23 0 0 0 chr13 16866134 16866157 -103418155 + AT_rich Low_complexity Low_complexity 1 23 0 4 713 585 198 64 137 chr13 16867424 16867752 -103416560 + L1_Rod LINE L1 2450 2753 -3094 4 713 257 284 25 0 chr13 16867778 16867859 -103416453 + Lx9 LINE L1 7082 7164 -480 4 713 657 304 92 22 chr13 16867939 16868211 -103416101 + MLT1A LTR MaLR 34 324 -50 4 713 441 0 0 0 chr13 16869160 16869209 -103415103 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 713 2493 168 94 2 chr13 16869217 16869707 -103414605 - Lx4A LINE L1 -2 7056 6522 4 713 366 23 0 0 chr13 16870145 16870188 -103414124 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 713 288 91 0 0 chr13 16870188 16870232 -103414080 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 713 181 98 0 47 chr13 16870288 16870331 -103413981 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 4 713 312 212 11 56 chr13 16870507 16870597 -103413715 - MLT1A1 LTR MaLR 0 408 323 4 713 229 68 0 43 chr13 16870839 16870885 -103413427 + (TTAAA)n Simple_repeat Simple_repeat 4 47 0 4 713 297 0 0 0 chr13 16871263 16871296 -103413016 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 713 200 366 44 18 chr13 16871365 16871479 -103412833 - L4 LINE RTE -1602 427 311 4 713 1527 228 101 19 chr13 16871824 16872084 -103412228 - MTD LTR MaLR 0 419 128 4 713 562 219 285 50 chr13 16872084 16872382 -103411930 - RLTR9A LTR ERVK 0 368 1 4 713 1527 228 101 19 chr13 16872382 16872497 -103411815 - MTD LTR MaLR -292 127 13 4 713 270 0 0 0 chr13 16872497 16872527 -103411785 + (A)n Simple_repeat Simple_repeat 1 30 0 4 713 225 204 20 0 chr13 16873588 16873637 -103410675 + T-rich Low_complexity Low_complexity 4 53 0 4 713 1186 74 0 0 chr13 16873641 16873789 -103410523 - B1_Mus1 SINE Alu 0 148 1 4 713 592 214 84 0 chr13 16873866 16873997 -103410315 - B1_Mus1 SINE Alu -6 142 1 4 713 225 0 0 0 chr13 16874190 16874215 -103410097 + (A)n Simple_repeat Simple_repeat 1 25 0 4 713 2434 157 2 2 chr13 16874215 16874611 -103409701 - Lx5 LINE L1 -457 6593 6198 4 713 434 245 27 20 chr13 16874668 16874814 -103409498 - Lx5 LINE L1 -951 6099 5953 4 713 1523 216 124 21 chr13 16874810 16875136 -103409176 + Lx4B LINE L1 6585 6911 -147 4 713 369 0 0 0 chr13 16875136 16875177 -103409135 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 713 438 36 0 0 chr13 16875177 16875232 -103409080 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 713 1523 216 124 21 chr13 16875232 16875330 -103408982 + Lx4B LINE L1 6912 7053 -5 4 713 1249 68 6 6 chr13 16875365 16875543 -103408769 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 4 713 465 66 0 0 chr13 16875543 16875604 -103408708 + (GGAA)n Simple_repeat Simple_repeat 1 61 0 4 713 267 31 0 0 chr13 16876337 16876369 -103407943 + (GA)n Simple_repeat Simple_repeat 1 32 0 5 713 357 336 112 49 chr13 16876370 16876730 -103407582 - MLT1B LTR MaLR 0 374 2 5 713 198 0 0 0 chr13 16876734 16876756 -103407556 + (TA)n Simple_repeat Simple_repeat 2 23 0 5 713 204 217 0 0 chr13 16876756 16876802 -103407510 + (CGTG)n Simple_repeat Simple_repeat 2 47 0 5 713 795 135 0 0 chr13 16876801 16876934 -103407378 + (TA)n Simple_repeat Simple_repeat 2 134 0 5 713 180 0 0 0 chr13 16877153 16877173 -103407139 + (C)n Simple_repeat Simple_repeat 1 20 0 5 713 471 365 65 47 chr13 16878223 16878562 -103405750 + LTR40c LTR ERVL 1 345 -120 5 713 396 0 0 0 chr13 16878575 16878619 -103405693 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 713 723 24 0 0 chr13 16878619 16878704 -103405608 + (GAA)n Simple_repeat Simple_repeat 3 87 0 5 713 1958 232 23 18 chr13 16878704 16879275 -103405037 + L1_Rod LINE L1 4893 5466 -381 5 713 182 379 30 0 chr13 16879595 16879661 -103404651 + L2c LINE L2 3273 3340 -47 5 713 1667 116 23 0 chr13 16880069 16880327 -103403985 - Lx LINE L1 -477 6177 5914 5 713 1622 105 4 52 chr13 16880322 16880594 -103403718 + Lx LINE L1 6130 6388 -266 5 713 19184 164 62 27 chr13 16880630 16881484 -103402828 + L1_Mur2 LINE L1 1140 2049 -3828 5 713 396 0 0 0 chr13 16881484 16881528 -103402784 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 713 19184 171 50 32 chr13 16881528 16882927 -103401385 + L1_Mur2 LINE L1 2050 3469 -2408 5 713 300 70 0 0 chr13 16882927 16882970 -103401342 + (CAA)n Simple_repeat Simple_repeat 3 45 0 5 713 19184 171 50 32 chr13 16882970 16883807 -103400505 + L1_Mur2 LINE L1 3470 4237 -1640 5 713 3395 45 0 0 chr13 16883807 16884203 -103400109 + MTA_Mm LTR MaLR 1 396 0 5 713 19184 171 50 32 chr13 16884203 16885617 -103398695 + L1_Mur2 LINE L1 4238 5735 -142 5 713 442 237 77 54 chr13 16885596 16885855 -103398457 + L1_Mur3 LINE L1 2724 2988 -2892 5 713 352 312 21 88 chr13 16885891 16886084 -103398228 + L1M5 LINE L1 3031 3210 -2936 5 713 1108 82 0 0 chr13 16886106 16886253 -103398059 - B1_Mm SINE Alu 0 147 1 5 713 485 314 32 19 chr13 16886473 16886629 -103397683 + RSINE1 SINE B4 4 161 -4 5 713 222 105 0 0 chr13 16889336 16889374 -103394938 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 5 713 1771 169 3 65 chr13 16890874 16891241 -103393071 + Lx LINE L1 6199 6542 -112 5 713 384 294 0 18 chr13 16891967 16892078 -103392234 + L1M4 LINE L1 707 815 -5727 5 713 250 296 24 12 chr13 16892151 16892233 -103392079 - MTEb LTR MaLR 0 379 297 5 713 458 320 159 19 chr13 16892487 16892802 -103391510 + ORR1E LTR MaLR 1 359 0 5 713 282 95 0 0 chr13 16892918 16892960 -103391352 + (TAA)n Simple_repeat Simple_repeat 3 44 0 5 713 759 165 83 0 chr13 16893046 16893179 -103391133 + Lx2B LINE L1 6709 6852 -148 5 713 649 169 85 0 chr13 16893280 16893410 -103390902 + ORR1C1 LTR MaLR 1 141 -237 5 713 7641 47 7 0 chr13 16893427 16895007 -103389305 - L1Md_F3 LINE L1 0 6584 4995 5 713 1486 50 5 0 chr13 16895002 16895202 -103389110 + L1_Mm LINE L1 4524 4724 -1159 5 713 1497 191 7 25 chr13 16895202 16895486 -103388826 + ORR1C1 LTR MaLR 100 378 0 5 713 301 167 69 0 chr13 16895494 16895566 -103388746 + L1M4 LINE L1 3393 3469 -2677 5 713 1080 57 0 14 chr13 16895578 16895721 -103388591 + B1_Mm SINE Alu 7 147 0 5 713 386 293 189 39 chr13 16895783 16895989 -103388323 + B4 SINE B4 35 271 -21 5 713 23 33 0 0 chr13 16896092 16896122 -103388190 + AT_rich Low_complexity Low_complexity 1 30 0 5 713 506 296 119 57 chr13 16896128 16896375 -103387937 + RMER17C LTR ERVK 1 262 -148 5 713 4173 140 56 6 chr13 16896375 16897072 -103387240 - Lx2B LINE L1 -1 6999 6268 5 713 506 296 119 57 chr13 16897072 16897178 -103387134 + RMER17C LTR ERVK 263 376 -34 5 713 360 292 96 66 chr13 16897184 16897547 -103386765 + L1M4 LINE L1 5265 5638 -546 5 713 324 0 0 0 chr13 16898128 16898164 -103386148 + (TA)n Simple_repeat Simple_repeat 1 36 0 5 713 3922 65 68 13 chr13 16898730 16899261 -103385051 - LTRIS2 LTR ERV1 0 564 5 5 713 246 188 30 30 chr13 16899980 16900046 -103384266 + (TTTG)n Simple_repeat Simple_repeat 3 68 0 5 713 249 33 0 0 chr13 16900500 16900530 -103383782 + (T)n Simple_repeat Simple_repeat 1 30 0 5 713 375 145 0 0 chr13 16901341 16901410 -103382902 + (GGA)n Simple_repeat Simple_repeat 2 70 0 5 713 225 304 14 14 chr13 16902759 16902829 -103381483 + MLT1A1 LTR MaLR 12 81 -327 5 713 333 291 68 0 chr13 16903510 16903613 -103380699 - PB1D10 SINE Alu -7 110 1 5 713 256 246 154 119 chr13 16903882 16903899 -103380413 + B4 SINE B4 77 220 -68 5 713 536 211 0 66 chr13 16903899 16904021 -103380291 + PB1D9 SINE Alu 1 114 -6 5 713 689 294 44 17 chr13 16904148 16904328 -103379984 - B3A SINE B2 -5 193 9 5 713 376 316 68 61 chr13 16904409 16904672 -103379640 - Lx8 LINE L1 -1089 6384 6120 5 713 442 276 77 19 chr13 16906731 16906886 -103377426 + MER20 DNA MER1_type 41 204 -15 5 713 218 228 0 34 chr13 16907010 16907069 -103377243 + MIRm SINE MIR 220 276 0 5 713 2264 156 184 28 chr13 16907576 16907662 -103376650 - RMER4B LTR ERVK -14 571 480 5 713 887 104 23 0 chr13 16907662 16907835 -103376477 + (GA)n Simple_repeat Simple_repeat 1 177 0 5 713 2264 156 184 28 chr13 16907835 16908242 -103376070 - RMER4B LTR ERVK -106 479 1 5 714 339 235 0 0 chr13 16908422 16908520 -103375792 + (TA)n Simple_repeat Simple_repeat 2 99 0 5 714 202 239 0 0 chr13 16909846 16909892 -103374420 + A-rich Low_complexity Low_complexity 1 46 0 5 714 215 334 37 0 chr13 16910108 16910215 -103374097 - PB1 SINE Alu -2 125 2 5 714 780 111 0 0 chr13 16910598 16910742 -103373570 + (TC)n Simple_repeat Simple_repeat 2 145 0 5 714 270 0 0 0 chr13 16910742 16910771 -103373541 + (TA)n Simple_repeat Simple_repeat 1 30 0 5 714 274 310 85 37 chr13 16911139 16911303 -103373009 + MIR SINE MIR 37 208 -54 5 714 3220 55 8 2 chr13 16911523 16911921 -103372391 + MTB LTR MaLR 1 400 0 5 714 742 102 16 0 chr13 16912341 16912468 -103371844 + (TCTA)n Simple_repeat Simple_repeat 4 132 0 5 714 741 222 56 0 chr13 16913239 16913437 -103370875 - L1MB3 LINE L1 -40 6143 5935 5 714 288 0 0 0 chr13 16915994 16916026 -103368286 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 714 342 0 0 0 chr13 16916026 16916063 -103368249 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 714 246 174 0 0 chr13 16916403 16916449 -103367863 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 714 459 35 0 0 chr13 16916449 16916506 -103367806 + (GA)n Simple_repeat Simple_repeat 1 57 0 5 714 428 238 99 93 chr13 16917865 16918027 -103366285 + RSINE1 SINE B4 3 165 0 5 714 655 272 72 29 chr13 16918536 16918881 -103365431 - L1MA9 LINE L1 -166 6146 5787 5 714 285 191 16 0 chr13 16918909 16918972 -103365340 + L1M2 LINE L1 5319 5382 -921 5 714 824 304 34 5 chr13 16919028 16919236 -103365076 + B3 SINE B2 3 216 0 5 714 605 256 59 28 chr13 16919314 16919567 -103364745 + L1M2 LINE L1 5508 5768 -523 5 714 592 270 60 7 chr13 16919581 16919730 -103364582 + RSINE1 SINE B4 2 158 -7 5 714 333 0 0 0 chr13 16919815 16919852 -103364460 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 714 390 295 149 4 chr13 16919852 16920094 -103364218 - L1MA9 LINE L1 -1334 4809 4533 5 714 246 158 18 0 chr13 16920231 16920301 -103364011 - L1MA9 LINE L1 -1657 4489 4413 5 714 459 0 0 0 chr13 16920328 16920379 -103363933 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 714 423 336 15 15 chr13 16920383 16920519 -103363793 - RSINE1 SINE B4 -19 146 11 5 714 740 299 59 8 chr13 16920631 16921106 -103363206 - L1M3 LINE L1 -3282 2858 2360 5 714 251 306 31 36 chr13 16921103 16921296 -103363016 + L1M4c LINE L1 1518 1709 -4675 5 714 2805 185 71 47 chr13 16921955 16922775 -103361537 + RLTR13D6 LTR ERVK 1 803 0 5 714 301 329 86 71 chr13 16925235 16925644 -103358668 + L2 LINE L2 2471 2885 -534 5 714 228 35 0 0 chr13 16926343 16926372 -103357940 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 714 609 322 68 32 chr13 16926416 16926695 -103357617 - B4A SINE B4 -2 290 2 5 714 22 35 0 0 chr13 16926832 16926861 -103357451 + AT_rich Low_complexity Low_complexity 1 29 0 5 714 405 0 0 0 chr13 16927470 16927515 -103356797 + (TAA)n Simple_repeat Simple_repeat 3 47 0 5 714 435 52 0 0 chr13 16928913 16928971 -103355341 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 5 714 357 284 42 33 chr13 16929767 16929887 -103354425 - B1F SINE Alu -9 140 20 5 714 207 0 0 0 chr13 16930501 16930524 -103353788 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 714 248 120 20 0 chr13 16930524 16930574 -103353738 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 714 1130 59 0 0 chr13 16930965 16931101 -103353211 + B1_Mus1 SINE Alu 1 136 -12 5 714 198 0 0 0 chr13 16931104 16931126 -103353186 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 714 180 0 0 0 chr13 16931130 16931150 -103353162 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 714 1200 54 0 0 chr13 16931723 16931870 -103352442 + B1_Mus2 SINE Alu 1 147 0 5 714 221 75 25 0 chr13 16931877 16931917 -103352395 + (CAAAA)n Simple_repeat Simple_repeat 4 44 0 5 714 261 227 27 0 chr13 16932607 16932717 -103351595 + GA-rich Low_complexity Low_complexity 2 114 0 5 714 900 255 81 16 chr13 16932808 16933055 -103351257 + MTE2b LTR MaLR 5 267 -112 5 714 1426 253 57 72 chr13 16933057 16933653 -103350659 - L1_Mur3 LINE L1 -917 4963 4377 5 714 318 264 45 45 chr13 16933851 16934006 -103350306 - Lx8 LINE L1 -206 7267 7113 5 714 3060 97 72 0 chr13 16934021 16934466 -103349846 - L1_Mus4 LINE L1 -3 6633 6157 5 714 285 286 22 11 chr13 16934552 16934644 -103349668 + B4A SINE B4 1 93 -199 5 714 372 43 0 0 chr13 16934880 16934926 -103349386 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 714 1162 42 14 0 chr13 16935252 16935394 -103348918 + B1_Mm SINE Alu 1 144 -3 5 714 207 0 0 0 chr13 16935394 16935417 -103348895 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 714 215 93 0 23 chr13 16935770 16935814 -103348498 + (TCTCTG)n Simple_repeat Simple_repeat 6 48 0 5 714 764 324 43 80 chr13 16935821 16935832 -103348480 - B4A SINE B4 0 292 283 6 714 452 18 18 0 chr13 16935832 16935889 -103348423 + (GA)n Simple_repeat Simple_repeat 1 58 0 6 714 764 324 43 80 chr13 16935889 16936179 -103348133 - B4A SINE B4 -10 282 2 6 714 21 0 0 0 chr13 16936354 16936375 -103347937 + AT_rich Low_complexity Low_complexity 1 21 0 6 714 32 26 0 0 chr13 16936639 16936678 -103347634 + AT_rich Low_complexity Low_complexity 1 39 0 6 714 21 0 0 0 chr13 16936729 16936750 -103347562 + AT_rich Low_complexity Low_complexity 1 21 0 6 714 189 0 0 0 chr13 16937858 16937879 -103346433 + (T)n Simple_repeat Simple_repeat 1 21 0 6 714 495 60 24 12 chr13 16938996 16939081 -103345231 + (GA)n Simple_repeat Simple_repeat 2 87 0 6 714 444 292 25 0 chr13 16939183 16939303 -103345009 - MER20 DNA MER1_type -15 204 82 6 714 24 0 0 0 chr13 16940002 16940026 -103344286 + AT_rich Low_complexity Low_complexity 1 24 0 6 714 2195 70 14 0 chr13 16940026 16940313 -103343999 - L1_Mus1 LINE L1 -2 6565 6275 6 714 292 314 131 49 chr13 16940352 16940657 -103343655 + MLT1D LTR MaLR 127 456 -49 6 714 413 250 7 13 chr13 16940703 16940853 -103343459 - Lx9 LINE L1 -3 7641 7493 6 714 291 312 81 33 chr13 16940881 16941216 -103343096 + L1MC4 LINE L1 7262 7612 -430 6 714 22 0 0 0 chr13 16941326 16941348 -103342964 + AT_rich Low_complexity Low_complexity 1 22 0 6 714 544 320 130 63 chr13 16941369 16941639 -103342673 - B4 SINE B4 -4 288 1 6 714 24 0 0 0 chr13 16941820 16941844 -103342468 + AT_rich Low_complexity Low_complexity 1 24 0 6 714 785 151 0 14 chr13 16942020 16942168 -103342144 + GA-rich Low_complexity Low_complexity 3 148 0 6 714 248 326 146 10 chr13 16942179 16942275 -103342037 - MLT1E3 LTR MaLR -268 356 248 6 714 291 295 103 0 chr13 16942368 16942446 -103341866 - PB1D10 SINE Alu -8 109 24 6 714 348 282 87 24 chr13 16942491 16942618 -103341694 - MLT1E3 LTR MaLR -487 137 3 6 714 1499 177 59 3 chr13 16942693 16942982 -103341330 - RMER20B LTR ERVK -118 509 205 6 714 1143 140 32 0 chr13 16942977 16943163 -103341149 - B2_Mm2 SINE B2 -3 192 1 6 714 1335 153 5 9 chr13 16943165 16943383 -103340929 - RMER20B LTR ERVK -410 217 1 6 714 253 260 137 0 chr13 16943496 16943569 -103340743 + B3 SINE B2 129 211 -5 6 714 716 283 27 108 chr13 16943584 16943881 -103340431 + MTE2a LTR MaLR 14 286 -93 6 714 651 323 36 0 chr13 16947871 16948063 -103336249 + B3 SINE B2 1 199 -17 6 714 591 102 0 0 chr13 16948096 16948184 -103336128 + (TA)n Simple_repeat Simple_repeat 1 88 0 6 714 251 202 177 0 chr13 16949322 16949446 -103334866 - L1MA6 LINE L1 -1 6299 6154 6 714 345 353 59 15 chr13 16950410 16950622 -103333690 + MIRb SINE MIR 45 261 -1 6 714 847 295 52 22 chr13 16951074 16951306 -103333006 - 7SK RNA RNA -92 239 1 6 714 897 168 0 0 chr13 16951329 16951508 -103332804 + CT-rich Low_complexity Low_complexity 1 179 0 6 714 373 211 14 0 chr13 16951514 16951585 -103332727 - BC1_Mm scRNA scRNA -72 80 9 6 714 228 227 23 0 chr13 16951550 16951594 -103332718 - ZP3AR Satellite Satellite -127 85 41 6 714 22 0 0 0 chr13 16953024 16953046 -103331266 + AT_rich Low_complexity Low_complexity 1 22 0 6 714 2173 145 0 3 chr13 16953083 16953435 -103330877 - Lx2 LINE L1 -366 6631 6281 6 714 260 280 17 86 chr13 16953646 16953763 -103330549 - MIRb SINE MIR -103 165 57 6 714 180 0 0 0 chr13 16953768 16953788 -103330524 + (TTA)n Simple_repeat Simple_repeat 1 20 0 6 714 2345 219 35 13 chr13 16953788 16954333 -103329979 - Lx2B LINE L1 -13 6987 6431 6 714 498 291 91 0 chr13 16954346 16954521 -103329791 + Lx7 LINE L1 7111 7301 -395 6 714 202 227 0 15 chr13 16954530 16954597 -103329715 + T-rich Low_complexity Low_complexity 3 68 0 6 714 216 0 0 0 chr13 16954597 16954621 -103329691 + (GA)n Simple_repeat Simple_repeat 1 24 0 6 714 207 100 0 0 chr13 16954693 16954723 -103329589 + (TAA)n Simple_repeat Simple_repeat 1 30 0 6 714 686 251 207 9 chr13 16955136 16955349 -103328963 + ORR1D2 LTR MaLR 115 369 -1 6 714 1385 241 47 47 chr13 16955350 16955560 -103328752 + ORR1D2-int LTR MaLR 1 206 -1164 6 714 315 0 0 0 chr13 16955560 16955595 -103328717 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 6 714 1385 241 47 47 chr13 16955595 16955654 -103328658 + ORR1D2-int LTR MaLR 207 265 -1105 6 714 180 0 0 0 chr13 16955654 16955674 -103328638 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 714 1385 241 47 47 chr13 16955674 16955787 -103328525 + ORR1D2-int LTR MaLR 266 384 -986 6 714 522 226 45 8 chr13 16955790 16955924 -103328388 + ORR1D2-int LTR MaLR 547 685 -685 6 714 2072 233 71 15 chr13 16955945 16956447 -103327865 + ORR1D2-int LTR MaLR 848 1599 -193 6 714 531 45 0 0 chr13 16956468 16956534 -103327778 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 714 396 103 0 0 chr13 16956546 16956604 -103327708 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 714 1265 259 75 9 chr13 16956628 16956975 -103327337 + ORR1D2 LTR MaLR 1 370 0 6 714 1108 269 42 37 chr13 16957294 16957727 -103326585 + Lx9 LINE L1 7028 7462 -182 6 714 210 24 45 45 chr13 16957854 16957898 -103326414 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 6 714 811 181 14 0 chr13 16958140 16958278 -103326034 - B1_Mus2 SINE Alu -7 140 1 6 714 662 221 52 5 chr13 16958378 16958569 -103325743 - Lx6 LINE L1 -1556 5904 5705 6 714 853 224 14 41 chr13 16958618 16958837 -103325475 - B3 SINE B2 -3 213 1 6 714 24 0 0 0 chr13 16959168 16959192 -103325120 + AT_rich Low_complexity Low_complexity 1 24 0 6 714 6685 88 56 9 chr13 16959195 16960201 -103324111 - Lx3_Mus LINE L1 -11 6998 5946 6 714 1246 77 22 0 chr13 16960201 16960383 -103323929 + Lx3_Mus LINE L1 5750 5935 -1074 6 714 270 262 143 19 chr13 16960429 16960534 -103323778 - MIRc SINE MIR -142 126 9 6 714 259 329 116 48 chr13 16962181 16962328 -103321984 + MLT1I LTR MaLR 8 164 -247 6 714 192 398 73 20 chr13 16962618 16962864 -103321448 - MIR SINE MIR -1 261 3 6 714 206 289 130 27 chr13 16964958 16965104 -103319208 + L2a LINE L2 2963 3123 -303 6 714 524 254 7 100 chr13 16965146 16965240 -103319072 - MTE2a LTR MaLR -49 330 245 6 714 6307 52 0 9 chr13 16965240 16966033 -103318279 + L1Md_F2 LINE L1 5797 6582 0 6 714 524 295 25 99 chr13 16966033 16966122 -103318190 - MTE2a LTR MaLR -137 282 196 6 714 197 291 0 18 chr13 16966296 16966352 -103317960 + L2a LINE L2 3291 3345 -81 6 714 315 313 0 88 chr13 16967179 16967270 -103317042 - RSINE1 SINE B4 0 165 83 6 714 23 68 0 0 chr13 16967346 16967390 -103316922 + AT_rich Low_complexity Low_complexity 1 44 0 6 714 696 103 0 0 chr13 16967930 16968037 -103316275 + (GAAA)n Simple_repeat Simple_repeat 3 109 0 6 714 315 234 0 0 chr13 16968045 16968122 -103316190 + G-rich Low_complexity Low_complexity 5 81 0 6 714 673 348 68 0 chr13 16968507 16968757 -103315555 + B4 SINE B4 26 292 0 6 714 2490 135 25 18 chr13 16969405 16969806 -103314506 - MTC LTR MaLR -1 420 17 6 714 1433 247 110 6 chr13 16969877 16970223 -103314089 - MTD LTR MaLR -36 383 2 6 714 182 242 0 0 chr13 16970382 16970415 -103313897 + MER5B DNA MER1_type 82 114 -64 6 714 378 327 66 13 chr13 16970705 16970857 -103313455 + L1MDb LINE L1 240 399 -6234 6 714 705 253 80 30 chr13 16970890 16971191 -103313121 + L1MDb LINE L1 1023 1338 -5202 6 714 366 267 17 0 chr13 16971251 16971371 -103312941 - L1_Rod LINE L1 -1161 4686 4565 6 714 17817 22 7 0 chr13 16971384 16974226 -103310086 - L1Md_A LINE L1 -2 6580 3713 6 714 34092 24 53 6 chr13 16974232 16980130 -103304182 - L1Md_A LINE L1 0 6582 416 6 714 372 261 33 43 chr13 16980131 16980315 -103303997 - L1_Mur3 LINE L1 -1508 4632 4423 6 714 711 267 55 13 chr13 16980443 16980570 -103303742 + Lx9 LINE L1 6347 6482 -1162 6 714 471 113 0 0 chr13 16980570 16980641 -103303671 + (CA)n Simple_repeat Simple_repeat 2 72 0 6 714 1032 309 169 28 chr13 16980641 16981429 -103302883 + Lx9 LINE L1 6483 7289 -355 6 714 303 275 0 23 chr13 16981664 16981835 -103302477 + (TA)n Simple_repeat Simple_repeat 1 167 0 6 714 305 292 0 0 chr13 16981720 16981816 -103302496 + (TCTCTG)n Simple_repeat Simple_repeat 3 98 0 6 714 848 310 50 85 chr13 16982316 16982796 -103301516 - Lx8 LINE L1 -349 7124 6662 6 714 346 309 82 13 chr13 16982802 16983105 -103301207 + L1MDb LINE L1 1535 1950 -4518 6 714 439 297 27 9 chr13 16983137 16983249 -103301063 + RSINE1 SINE B4 9 122 -43 6 714 432 300 153 30 chr13 16983260 16983649 -103300663 + L1MDb LINE L1 2574 3001 -3536 6 714 10370 54 1 1 chr13 16983654 16985049 -103299263 - L1_Mm LINE L1 -1082 4801 3408 6 714 509 16 0 0 chr13 16985046 16985107 -103299205 + L1_Mm LINE L1 4812 4872 -1011 6 714 1246 333 98 52 chr13 16985124 16985238 -103299074 - MTE-int LTR MaLR -462 1118 1011 6 714 252 86 0 0 chr13 16985238 16985273 -103299039 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 6 714 662 211 75 0 chr13 16985277 16985410 -103298902 - B1_Mur4 SINE Alu -7 143 1 6 714 1246 333 98 52 chr13 16985410 16985863 -103298449 - MTE-int LTR MaLR -570 1010 520 6 714 26 88 0 0 chr13 16985933 16986001 -103298311 + AT_rich Low_complexity Low_complexity 1 68 0 6 714 404 256 76 8 chr13 16986445 16986563 -103297749 - MER3 DNA MER1_type -60 149 24 6 714 862 229 31 5 chr13 16987129 16987196 -103297116 + ORR1A4 LTR MaLR 130 201 -128 6 714 2946 35 0 6 chr13 16987196 16987544 -103296768 - ORR1A0 LTR MaLR 0 346 1 6 714 862 229 31 5 chr13 16987544 16987669 -103296643 + ORR1A4 LTR MaLR 202 327 -2 6 714 197 108 0 26 chr13 16987889 16987927 -103296385 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 6 714 340 329 80 32 chr13 16989005 16989153 -103295159 + Tigger16b DNA Tigger 57 319 -18 6 714 341 267 29 19 chr13 16989153 16989256 -103295056 + Tigger16b DNA TcMar 184 287 0 6 714 184 350 118 28 chr13 16989521 16989733 -103294579 + MIRb SINE MIR 2 232 -36 6 714 6304 96 10 1 chr13 16991201 16992084 -103292228 + Lx LINE L1 5752 6642 -12 6 714 856 275 0 0 chr13 16992638 16992849 -103291463 + B3 SINE B2 3 213 -3 6 714 273 57 0 0 chr13 16994095 16994130 -103290182 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 714 916 141 80 0 chr13 16994490 16994653 -103289659 + URR1A DNA MER1_type 51 226 0 6 714 815 280 101 14 chr13 16994675 16995048 -103289264 + Lx9 LINE L1 6892 7425 -219 6 714 227 122 20 0 chr13 16995076 16995125 -103289187 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 714 241 274 0 16 chr13 16995125 16995188 -103289124 + (CATATA)n Simple_repeat Simple_repeat 4 65 0 6 714 21 0 0 0 chr13 16995295 16995316 -103288996 + AT_rich Low_complexity Low_complexity 1 21 0 6 714 333 308 19 17 chr13 16995529 16995786 -103288526 + L1_Mur3 LINE L1 1474 1734 -4146 6 714 220 254 0 0 chr13 16995787 16995842 -103288470 + GA-rich Low_complexity Low_complexity 2 56 0 6 714 189 0 0 0 chr13 16995861 16995882 -103288430 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 6 714 482 327 77 21 chr13 16995885 16996260 -103288052 + L1_Mur3 LINE L1 3675 4070 -1810 6 714 243 0 0 0 chr13 16996571 16996598 -103287714 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 714 201 94 0 0 chr13 16997894 16997926 -103286386 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7 714 345 47 0 0 chr13 16997945 16997988 -103286324 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 714 372 83 200 0 chr13 16998302 16998362 -103285950 - 5S rRNA rRNA -28 93 22 7 714 2789 84 8 8 chr13 16998362 16998748 -103285564 + L1Md_F2 LINE L1 6195 6580 -2 7 714 485 104 13 0 chr13 16999833 16999910 -103284402 + (TTTC)n Simple_repeat Simple_repeat 1 78 0 7 714 348 328 135 40 chr13 17000188 17000484 -103283828 + MLT1J2 LTR MaLR 9 332 -116 1 714 3171 56 0 8 chr13 17000657 17001055 -103283257 + MTA_Mm LTR MaLR 2 396 0 2 714 270 0 0 0 chr13 17001343 17001373 -103282939 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 714 387 0 0 0 chr13 17001373 17001415 -103282897 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 714 852 63 0 0 chr13 17003361 17003472 -103280840 + (TC)n Simple_repeat Simple_repeat 1 111 0 5 714 221 182 25 25 chr13 17004763 17004842 -103279470 + (TATAA)n Simple_repeat Simple_repeat 3 81 0 6 714 180 337 29 95 chr13 17006294 17006399 -103277913 - MIR SINE MIR -45 217 120 7 714 357 75 0 0 chr13 17008526 17008579 -103275733 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 8 714 22 0 0 0 chr13 17008702 17008724 -103275588 + AT_rich Low_complexity Low_complexity 1 22 0 9 714 1430 93 5 0 chr13 17009242 17009435 -103274877 - B2_Mm2 SINE B2 -1 194 1 1 714 2391 92 16 41 chr13 17009499 17009886 -103274426 - L1_Mus3 LINE L1 -14 6624 6248 1 714 414 85 0 0 chr13 17010507 17010566 -103273746 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 714 681 285 45 0 chr13 17011181 17011381 -103272931 - B3 SINE B2 -5 211 3 1 714 1314 103 16 0 chr13 17011835 17012019 -103272293 + B2_Mm2 SINE B2 1 187 -8 1 714 2097 237 91 16 chr13 17012067 17012582 -103271730 - RMER15 LTR ERVL 0 575 22 1 714 227 352 151 17 chr13 17012761 17012940 -103271372 + MIR SINE MIR 57 259 -3 1 714 219 146 0 0 chr13 17013376 17013417 -103270895 + (GGA)n Simple_repeat Simple_repeat 2 42 0 1 714 481 134 26 18 chr13 17013753 17013867 -103270445 + CT-rich Low_complexity Low_complexity 2 116 0 1 714 264 127 0 0 chr13 17014270 17014325 -103269987 + (T)n Simple_repeat Simple_repeat 1 55 0 1 714 23 33 0 0 chr13 17014874 17014904 -103269408 + AT_rich Low_complexity Low_complexity 1 30 0 2 714 207 0 0 0 chr13 17014904 17014927 -103269385 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 714 226 366 0 47 chr13 17015949 17016055 -103268257 + MIRb SINE MIR 132 232 -36 2 714 1161 261 52 42 chr13 17016158 17016560 -103267752 + MTE2a LTR MaLR 3 405 -14 2 714 187 400 37 19 chr13 17017463 17017570 -103266742 + MIR3 SINE MIR 8 116 -92 2 714 762 84 0 0 chr13 17018594 17018701 -103265611 + (CA)n Simple_repeat Simple_repeat 2 108 0 2 714 429 313 0 0 chr13 17018751 17018901 -103265411 + (CA)n Simple_repeat Simple_repeat 1 150 0 2 714 207 0 0 0 chr13 17019737 17019760 -103264552 + (A)n Simple_repeat Simple_repeat 1 23 0 2 714 197 355 108 0 chr13 17019879 17019972 -103264340 + MER5B DNA MER1_type 44 146 -32 2 714 513 290 26 71 chr13 17020134 17020468 -103263844 + L1MA4 LINE L1 5575 5889 -408 2 714 445 264 83 30 chr13 17022439 17022607 -103261705 + MTEa LTR MaLR 203 379 0 2 714 565 295 99 19 chr13 17022731 17023045 -103261267 + L1MB1 LINE L1 5596 5934 -234 3 714 877 218 13 124 chr13 17023206 17023431 -103260881 + B3 SINE B2 17 216 0 3 714 322 269 118 26 chr13 17023536 17023765 -103260547 + L1MA4 LINE L1 6044 6293 -7 2 714 976 254 46 13 chr13 17024017 17024256 -103260056 + RMER15 LTR ERVL 4 250 -325 3 714 1192 266 62 9 chr13 17024941 17025282 -103259030 + MTEb LTR MaLR 21 379 0 3 714 390 42 0 0 chr13 17027276 17027324 -103256988 + (CCAA)n Simple_repeat Simple_repeat 3 50 0 3 714 290 312 0 0 chr13 17027683 17027763 -103256549 + ID4_ SINE ID 1 80 -3 3 714 23 0 0 0 chr13 17028072 17028095 -103256217 + AT_rich Low_complexity Low_complexity 1 23 0 3 714 444 37 0 0 chr13 17028103 17028157 -103256155 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 714 277 219 135 14 chr13 17028168 17028242 -103256070 - RSINE1 SINE B4 -46 119 37 3 714 217 251 157 37 chr13 17031319 17031454 -103252858 - MIRm SINE MIR -120 156 3 3 714 362 295 10 153 chr13 17031616 17031812 -103252500 + B4A SINE B4 1 168 -124 4 714 35302 36 0 0 chr13 17031827 17037083 -103247229 + L1Md_T LINE L1 237 5589 -297 4 714 8937 8 0 0 chr13 17037083 17038079 -103246233 + L1Md_T LINE L1 5590 6585 0 4 714 269 333 58 58 chr13 17039065 17039288 -103245024 + MLT1M LTR MaLR 450 672 0 4 715 22 35 0 0 chr13 17039872 17039901 -103244411 + AT_rich Low_complexity Low_complexity 1 29 0 4 715 24 0 0 0 chr13 17040306 17040330 -103243982 + AT_rich Low_complexity Low_complexity 1 24 0 4 715 235 150 0 0 chr13 17040711 17040751 -103243561 + L1MA4 LINE L1 6185 6224 -76 4 715 266 323 50 10 chr13 17041431 17041531 -103242781 + MIRb SINE MIR 73 176 -92 4 715 200 35 35 0 chr13 17041626 17041655 -103242657 + (TATAA)n Simple_repeat Simple_repeat 5 34 0 4 715 1018 208 280 31 chr13 17042116 17042493 -103241819 + RLTR20C LTR ERVK 1 494 -74 4 715 2527 59 0 0 chr13 17042754 17043075 -103241237 + L1Md_F2 LINE L1 6250 6570 -12 4 715 21 36 0 0 chr13 17043753 17043781 -103240531 + AT_rich Low_complexity Low_complexity 1 28 0 5 715 485 156 0 10 chr13 17044902 17044999 -103239313 + GA-rich Low_complexity Low_complexity 1 96 0 5 715 254 64 0 60 chr13 17045618 17045668 -103238644 + (T)n Simple_repeat Simple_repeat 1 47 0 5 715 1162 68 0 0 chr13 17045689 17045835 -103238477 + B1_Mm SINE Alu 2 147 0 5 715 2134 216 46 49 chr13 17046421 17047540 -103236772 + Lx9 LINE L1 726 1842 -4005 5 715 266 261 26 26 chr13 17047545 17047628 -103236684 + Lx9 LINE L1 1966 2048 -3799 5 715 1616 143 15 0 chr13 17047628 17047894 -103236418 + Lx2A1 LINE L1 6737 7006 -2 5 715 266 261 26 26 chr13 17047894 17047924 -103236388 + Lx9 LINE L1 2049 2079 -3768 5 715 4017 238 72 118 chr13 17047904 17048071 -103236241 + Lx9 LINE L1 3018 3195 -2652 5 715 4032 38 0 2 chr13 17048071 17048548 -103235764 + L1_Mus1 LINE L1 6090 6565 -2 5 715 4017 238 72 118 chr13 17048548 17049570 -103234742 + Lx9 LINE L1 3196 4230 -1617 5 715 4732 95 22 3 chr13 17049570 17050244 -103234068 + L1_Mus3 LINE L1 5945 6631 -7 5 715 4017 238 72 118 chr13 17050244 17050531 -103233781 + Lx9 LINE L1 4231 4417 -1430 5 715 1219 35 0 0 chr13 17050531 17050674 -103233638 - B1_Mus1 SINE Alu -5 143 1 5 715 4017 238 72 118 chr13 17050674 17051199 -103233113 + Lx9 LINE L1 4418 4928 -919 5 715 1858 225 41 3 chr13 17051197 17051589 -103232723 + Lx6 LINE L1 6980 7386 -74 5 715 288 0 0 0 chr13 17051634 17051666 -103232646 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 6 715 8212 140 38 14 chr13 17051666 17053730 -103230582 - Lx4B LINE L1 -19 7039 4927 6 715 847 118 30 0 chr13 17053725 17053860 -103230452 + Lx4B LINE L1 4694 4832 -1045 6 715 2269 233 149 67 chr13 17053858 17055454 -103228858 + Lx9 LINE L1 5016 6884 -760 5 715 216 97 0 0 chr13 17056049 17056080 -103228232 + (TA)n Simple_repeat Simple_repeat 1 31 0 6 715 184 325 86 49 chr13 17056186 17056267 -103228045 + MIRm SINE MIR 87 170 -106 6 715 2874 88 52 2 chr13 17058493 17058914 -103225398 + BGLII_A LTR ERVK 1 442 -3 6 715 242 348 45 0 chr13 17059319 17059474 -103224838 - L1MB3 LINE L1 -63 6120 5959 6 715 437 318 83 0 chr13 17061312 17061444 -103222868 - B1F1 SINE Alu -6 143 1 6 715 30 0 0 0 chr13 17061827 17061857 -103222455 + AT_rich Low_complexity Low_complexity 1 30 0 6 715 1806 187 74 24 chr13 17063578 17063999 -103220313 + Lx2B LINE L1 6549 6990 -10 6 715 279 285 46 93 chr13 17064700 17064851 -103219461 + ID_B1 SINE B4 74 217 -7 6 715 433 238 69 31 chr13 17064727 17064857 -103219455 + B1F1 SINE Alu 12 146 -3 7 715 445 335 48 27 chr13 17066251 17066438 -103217874 + RMER15 LTR ERVL 371 561 -14 7 715 38 0 0 0 chr13 17070766 17070804 -103213508 + AT_rich Low_complexity Low_complexity 1 38 0 7 715 548 308 25 13 chr13 17070896 17071054 -103213258 - B3A SINE B2 -38 160 1 7 715 426 290 22 7 chr13 17071620 17071759 -103212553 + B1F SINE Alu 1 141 -8 7 715 234 305 50 92 chr13 17071633 17071774 -103212538 + B4A SINE B4 99 233 -59 7 715 214 327 73 0 chr13 17072837 17072947 -103211365 + MIRb SINE MIR 84 201 -67 7 715 199 104 42 0 chr13 17073386 17073434 -103210878 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 7 715 293 145 0 16 chr13 17074040 17074103 -103210209 + T-rich Low_complexity Low_complexity 4 65 0 7 715 871 262 47 0 chr13 17074268 17074459 -103209853 + B3 SINE B2 1 200 -16 7 715 204 40 0 0 chr13 17074531 17074556 -103209756 + (TA)n Simple_repeat Simple_repeat 1 25 0 8 715 2184 113 0 58 chr13 17074648 17074995 -103209317 - ORR1A2 LTR MaLR 0 327 1 8 715 231 330 21 21 chr13 17075458 17075551 -103208761 + Lx8 LINE L1 7098 7190 -283 8 715 551 118 0 0 chr13 17076242 17076335 -103207977 + L1_Mus3 LINE L1 6540 6632 -6 8 715 1338 73 0 0 chr13 17076548 17076727 -103207585 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 8 715 237 236 0 53 chr13 17076753 17076829 -103207483 - RLTR31_Mm LTR ERVK 0 561 490 8 715 192 111 0 0 chr13 17076844 17076880 -103207432 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 8 715 1119 89 0 0 chr13 17076886 17077032 -103207280 - B1_Mus2 SINE Alu -1 146 1 8 715 3392 167 22 3 chr13 17077041 17077619 -103206693 - RLTR17 LTR ERVK -103 589 1 8 715 817 208 104 0 chr13 17077623 17077864 -103206448 - MYSERV16_I-int LTR ERVK -4 2322 2057 8 715 423 311 108 66 chr13 17077868 17078292 -103206020 + L1MD1 LINE L1 4527 4968 -1178 8 715 731 303 27 27 chr13 17078350 17078608 -103205704 - Lx8 LINE L1 -104 7369 7112 9 715 1083 270 101 154 chr13 17078608 17079194 -103205118 - RMER15 LTR ERVL -2 573 19 9 715 1634 316 24 41 chr13 17079404 17079759 -103204553 - Lx8 LINE L1 -621 7075 6710 9 715 5710 80 22 27 chr13 17079759 17080571 -103203741 + RLTR13C2 LTR ERVK 1 808 0 9 715 1634 307 22 38 chr13 17080571 17080884 -103203428 - Lx8 LINE L1 -754 6719 6415 9 715 232 275 111 48 chr13 17080886 17081012 -103203300 + MER110A LTR ERV1 65 198 -270 9 715 250 266 63 0 chr13 17081012 17081091 -103203221 - Lx8 LINE L1 -1189 6284 6201 9 715 36 0 0 0 chr13 17081111 17081147 -103203165 + AT_rich Low_complexity Low_complexity 1 36 0 9 715 571 142 58 0 chr13 17081153 17081273 -103203039 - Lx9 LINE L1 -9 7635 7509 9 715 1048 276 144 29 chr13 17081531 17081591 -103202721 + L1MD1 LINE L1 5532 5596 -646 8 715 429 63 37 37 chr13 17081591 17081673 -103202639 + (TAGA)n Simple_repeat Simple_repeat 4 85 0 9 715 1048 276 144 29 chr13 17081673 17081702 -103202610 + L1MD1 LINE L1 5597 5622 -620 8 715 2691 206 15 85 chr13 17081702 17082359 -103201953 + RMER19C LTR ERVK 1 611 0 9 715 1048 276 144 29 chr13 17082359 17082881 -103201431 + L1MD1 LINE L1 5623 6213 -29 8 715 225 185 235 0 chr13 17082989 17083070 -103201242 - L1M4 LINE L1 -1309 4837 4738 9 715 25 31 0 0 chr13 17083414 17083446 -103200866 + AT_rich Low_complexity Low_complexity 1 32 0 9 715 1017 110 0 0 chr13 17083693 17083839 -103200473 - B1_Mus2 SINE Alu -1 146 1 1 715 297 198 0 0 chr13 17084117 17084208 -103200104 + T-rich Low_complexity Low_complexity 1 91 0 1 715 287 315 30 45 chr13 17084399 17084532 -103199780 - L1_Rod LINE L1 -3618 2229 2099 1 715 631 252 48 32 chr13 17084703 17084994 -103199318 + L1MA4A LINE L1 4671 4973 -907 1 715 1169 262 83 17 chr13 17085046 17085364 -103198948 + L1MA4A LINE L1 5299 5641 -662 1 715 261 0 0 0 chr13 17085364 17085393 -103198919 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 715 1169 276 117 15 chr13 17085393 17085651 -103198661 + L1MA4A LINE L1 5642 5929 -374 1 715 683 249 138 5 chr13 17085777 17085832 -103198480 + Lx6 LINE L1 7054 7114 -346 1 715 450 36 0 0 chr13 17085832 17085888 -103198424 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 715 683 249 138 5 chr13 17085888 17086042 -103198270 + Lx6 LINE L1 7115 7290 -170 1 715 364 319 22 15 chr13 17086101 17086238 -103198074 + Lx7 LINE L1 7193 7330 -366 1 715 198 0 0 0 chr13 17086264 17086286 -103198026 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 715 31 44 0 0 chr13 17086427 17086472 -103197840 + AT_rich Low_complexity Low_complexity 1 45 0 1 715 299 301 43 26 chr13 17086745 17086861 -103197451 + RSINE1 SINE B4 48 165 0 1 715 28 29 0 0 chr13 17086988 17087023 -103197289 + AT_rich Low_complexity Low_complexity 1 35 0 1 715 819 263 75 98 chr13 17087260 17087648 -103196664 - MTE2a LTR MaLR 0 379 1 1 715 616 284 38 42 chr13 17087828 17088093 -103196219 - MER119 DNA MER1_type -90 493 230 1 715 688 111 8 8 chr13 17088235 17088353 -103195959 + (AGGGGG)n Simple_repeat Simple_repeat 5 122 0 1 715 1847 40 0 0 chr13 17088606 17088828 -103195484 + L1Md_F2 LINE L1 6017 6238 -344 1 715 930 70 0 44 chr13 17088846 17088981 -103195331 + B1_Mm SINE Alu 2 130 -17 1 715 465 263 0 17 chr13 17090677 17090793 -103193519 + B2_Mm2 SINE B2 75 188 -7 1 715 192 248 444 59 chr13 17090887 17090986 -103193326 - MIRb SINE MIR -67 141 5 1 715 286 259 45 106 chr13 17092544 17092743 -103191569 - Lx8 LINE L1 -2 7471 7285 1 715 1296 211 12 8 chr13 17093034 17093282 -103191030 - MTD LTR MaLR -136 283 35 1 715 369 0 0 0 chr13 17093468 17093509 -103190803 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 715 548 305 57 36 chr13 17093514 17093903 -103190409 - RLTR12B LTR ERVK -245 323 1 1 715 213 245 0 0 chr13 17094292 17094341 -103189971 + T-rich Low_complexity Low_complexity 1 49 0 1 715 1409 259 25 14 chr13 17094554 17094910 -103189402 + MTD LTR MaLR 60 419 0 1 715 1179 7 0 0 chr13 17095242 17095383 -103188929 + L1Md_A LINE L1 6442 6582 0 1 715 376 311 148 0 chr13 17095756 17095939 -103188373 + B3 SINE B2 2 211 -5 1 715 513 84 0 0 chr13 17096082 17096153 -103188159 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 715 2166 282 72 63 chr13 17096170 17097071 -103187241 - Lx9 LINE L1 -242 7402 6494 1 715 4747 249 78 113 chr13 17097084 17098093 -103186219 - L1_Rod LINE L1 -1144 4703 3661 1 715 183 80 0 0 chr13 17098093 17098118 -103186194 + (TTG)n Simple_repeat Simple_repeat 3 27 0 1 715 4747 249 78 113 chr13 17098118 17098926 -103185386 - L1_Rod LINE L1 -2187 3660 2864 1 715 342 0 0 0 chr13 17098926 17098964 -103185348 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 715 4747 249 78 113 chr13 17098964 17099826 -103184486 - L1_Rod LINE L1 -2984 2863 2119 1 715 602 216 9 0 chr13 17099823 17099939 -103184373 - Lx5 LINE L1 -394 6656 6540 1 715 3627 176 129 31 chr13 17099937 17100069 -103184243 + Lx5 LINE L1 5651 5797 -1253 1 715 1016 83 0 0 chr13 17100069 17100202 -103184110 + B1_Mus2 SINE Alu 2 134 -13 1 715 205 51 25 25 chr13 17100202 17100242 -103184070 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 1 715 3627 176 129 31 chr13 17100242 17100909 -103183403 + Lx5 LINE L1 5798 6528 -522 1 715 1385 252 100 19 chr13 17100927 17101868 -103182444 - L1_Rod LINE L1 -3942 1905 889 1 715 22 0 0 0 chr13 17102795 17102817 -103181495 + AT_rich Low_complexity Low_complexity 1 22 0 1 715 341 329 185 21 chr13 17102907 17103193 -103181119 - Lx8 LINE L1 -93 7380 7048 1 715 194 254 85 0 chr13 17103985 17104044 -103180268 - MIR SINE MIR -69 139 76 1 715 180 0 0 0 chr13 17104182 17104202 -103180110 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 715 261 261 130 0 chr13 17104798 17104867 -103179445 - MER5A1 DNA MER1_type -88 78 1 1 715 3306 164 11 103 chr13 17105206 17105864 -103178448 + L1_Mur2 LINE L1 5024 5630 -247 1 715 200 64 62 21 chr13 17105864 17105912 -103178400 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 715 3306 164 11 103 chr13 17105912 17106001 -103178311 + L1_Mur2 LINE L1 5631 5702 -175 1 715 21 0 0 0 chr13 17106089 17106110 -103178202 + AT_rich Low_complexity Low_complexity 1 21 0 1 715 378 0 0 0 chr13 17106811 17106853 -103177459 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 715 242 266 62 31 chr13 17109870 17109967 -103174345 - Lx5 LINE L1 -861 6189 6090 1 715 413 18 54 0 chr13 17110257 17110313 -103173999 + (GAAAA)n Simple_repeat Simple_repeat 2 60 0 1 715 291 297 47 78 chr13 17110755 17110883 -103173429 - LFSINE_Vert SINE SINE -284 175 52 1 715 302 348 56 60 chr13 17111755 17112006 -103172306 - Charlie16a DNA MER1_type -48 294 45 1 715 196 186 34 8 chr13 17112122 17112172 -103172140 - MIRb SINE MIR -151 117 62 1 715 893 320 8 12 chr13 17112648 17112895 -103171417 - Tigger7 DNA MER2_type -2245 246 1 1 715 1757 227 58 57 chr13 17113067 17113701 -103170611 - L1_Rod LINE L1 -260 5587 4953 1 715 883 314 40 36 chr13 17113699 17114172 -103170140 + Lx9 LINE L1 6760 7234 -410 1 715 204 40 0 0 chr13 17114330 17114355 -103169957 + (CATA)n Simple_repeat Simple_repeat 4 28 0 1 715 309 284 40 0 chr13 17114484 17114558 -103169754 + B4A SINE B4 212 288 -4 1 715 239 179 17 35 chr13 17114568 17114626 -103169686 + (CATA)n Simple_repeat Simple_repeat 4 60 0 1 715 724 271 27 8 chr13 17115675 17115932 -103168380 - L1M5 LINE L1 -330 5794 5533 1 715 351 314 50 31 chr13 17115981 17116142 -103168170 + MER104 DNA Tc2 6 169 -12 1 715 243 0 0 0 chr13 17117362 17117389 -103166923 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 715 675 78 0 0 chr13 17117389 17117491 -103166821 + (CAGAGA)n Simple_repeat Simple_repeat 3 105 0 1 715 222 37 0 0 chr13 17117654 17117681 -103166631 + (T)n Simple_repeat Simple_repeat 1 27 0 1 715 228 258 121 90 chr13 17117780 17117946 -103166366 + RMER20B LTR ERVK 427 597 -30 1 715 590 297 14 77 chr13 17118214 17118422 -103165890 - B3A SINE B2 0 198 4 1 715 301 218 41 6 chr13 17119812 17119983 -103164329 + (GTATG)n Simple_repeat Simple_repeat 1 177 0 1 715 421 340 70 70 chr13 17120100 17120400 -103163912 + LTR78 LTR ERV1 790 1089 -215 1 715 1173 322 55 17 chr13 17121677 17122207 -103162105 + Lx8 LINE L1 6568 7117 -356 1 715 245 269 73 49 chr13 17124080 17124162 -103160150 + MER5A DNA MER1_type 106 189 0 1 715 232 298 68 26 chr13 17124602 17124719 -103159593 - B4A SINE B4 -169 123 2 1 715 278 260 103 58 chr13 17124719 17124873 -103159439 + LTR16A1 LTR ERVL 296 456 0 1 715 255 170 0 0 chr13 17126046 17126093 -103158219 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 715 315 0 0 0 chr13 17127855 17127890 -103156422 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 715 337 305 47 0 chr13 17127906 17128034 -103156278 + L1MD2 LINE L1 6204 6337 -22 1 715 359 236 61 43 chr13 17128521 17128636 -103155676 - MIRb SINE MIR -78 190 74 1 715 198 0 0 0 chr13 17129624 17129646 -103154666 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 715 226 47 22 44 chr13 17130930 17130975 -103153337 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1 715 844 79 0 9 chr13 17130975 17131090 -103153222 - B1_Mus1 SINE Alu -1 147 34 1 715 220 303 72 49 chr13 17133816 17133955 -103150357 + L2b LINE L2 3085 3229 -158 1 715 394 340 44 129 chr13 17134409 17134645 -103149667 + B4A SINE B4 2 217 -75 1 715 2149 192 8 142 chr13 17134644 17135178 -103149134 - RLTR18B LTR ERVK -50 462 1 1 715 201 121 0 0 chr13 17135202 17135235 -103149077 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 715 313 290 30 116 chr13 17136357 17136556 -103147756 + MER20 DNA MER1_type 32 213 -6 1 715 581 308 59 11 chr13 17136925 17137112 -103147200 - RMER30 DNA MER1_type 0 202 7 1 715 423 0 0 0 chr13 17137354 17137401 -103146911 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 715 331 350 97 10 chr13 17138898 17139094 -103145218 + MIRc SINE MIR 47 259 -9 1 715 402 108 0 0 chr13 17139324 17139389 -103144923 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 715 246 309 61 61 chr13 17139703 17139834 -103144478 + MamRep605 Unknown Unknown 351 481 -395 1 715 311 171 13 0 chr13 17140436 17140512 -103143800 + CT-rich Low_complexity Low_complexity 1 77 0 1 715 378 61 0 0 chr13 17140717 17140766 -103143546 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 715 315 0 0 0 chr13 17141567 17141602 -103142710 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 715 417 314 81 3 chr13 17141603 17141741 -103142571 - B3A SINE B2 -53 163 20 1 715 252 0 0 0 chr13 17143894 17143922 -103140390 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 715 466 274 70 32 chr13 17144016 17144174 -103140138 - ORR1D2 LTR MaLR -29 341 178 1 715 699 292 12 0 chr13 17144361 17144532 -103139780 - B3 SINE B2 -6 210 38 1 715 21 36 0 0 chr13 17145199 17145227 -103139085 + AT_rich Low_complexity Low_complexity 1 28 0 1 715 569 264 7 45 chr13 17145317 17145472 -103138840 + B1_Mur2 SINE Alu 1 149 0 1 715 1784 328 96 42 chr13 17147057 17147138 -103137174 - MER21B LTR ERV1 0 863 783 1 715 2112 153 22 56 chr13 17147138 17147546 -103136766 + ORR1B1 LTR MaLR 1 394 0 1 715 1784 328 96 42 chr13 17147546 17148256 -103136056 - MER21B LTR ERV1 -81 782 29 1 715 438 261 71 91 chr13 17148293 17148546 -103135766 + MER2 DNA MER2_type 26 273 -72 1 715 382 376 45 26 chr13 17150250 17150515 -103133797 + LTR82B Low_complexity ERVL 139 408 -422 1 715 641 134 20 7 chr13 17150889 17151039 -103133273 + CT-rich Low_complexity Low_complexity 2 153 0 1 715 297 0 0 0 chr13 17151039 17151072 -103133240 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 715 1643 130 20 87 chr13 17151230 17151575 -103132737 + RLTRETN_Mm LTR ERVK 1 322 0 2 715 602 394 50 45 chr13 17151697 17151860 -103132452 + MLT1F LTR MaLR 3 169 -379 2 715 1242 28 0 7 chr13 17151860 17151999 -103132313 + B1_Mus2 SINE Alu 1 139 -8 2 715 216 0 0 0 chr13 17151999 17152023 -103132289 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 715 602 394 50 45 chr13 17152029 17152380 -103131932 + MLT1F LTR MaLR 170 519 -29 2 715 765 178 22 87 chr13 17152568 17152753 -103131559 - URR1B DNA MER1_type 0 225 53 2 715 216 363 43 43 chr13 17153420 17153607 -103130705 - B4A SINE B4 -49 243 57 2 715 338 286 9 9 chr13 17153927 17154033 -103130279 + GA-rich Low_complexity Low_complexity 4 109 0 2 715 498 33 0 0 chr13 17154146 17154206 -103130106 + (GATTG)n Simple_repeat Simple_repeat 2 61 0 2 715 3485 62 0 0 chr13 17154363 17154802 -103129510 + L1Md_T LINE L1 6144 6582 0 2 715 318 294 27 14 chr13 17155905 17156053 -103128259 + L1ME2 LINE L1 6009 6158 -6 2 715 287 339 71 53 chr13 17156117 17156454 -103127858 - L1MD1 LINE L1 -36 6206 5864 2 715 242 224 44 56 chr13 17156881 17156971 -103127341 - L1MDa LINE L1 -6337 296 208 2 715 1099 86 0 0 chr13 17157041 17157180 -103127132 + B1_Mus1 SINE Alu 2 140 -8 2 715 657 0 0 0 chr13 17157180 17157253 -103127059 + (GA)n Simple_repeat Simple_repeat 2 74 0 2 715 1380 179 109 32 chr13 17157569 17157916 -103126396 + ORR1C1 LTR MaLR 5 378 0 2 715 234 227 30 15 chr13 17159688 17159755 -103124557 + CT-rich Low_complexity Low_complexity 1 68 0 2 715 432 0 0 0 chr13 17159756 17159804 -103124508 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 715 381 394 71 17 chr13 17159807 17160047 -103124265 - B4 SINE B4 -38 254 2 2 715 762 250 97 0 chr13 17160075 17160251 -103124061 + B3 SINE B2 12 204 -12 2 715 207 204 0 0 chr13 17160556 17160605 -103123707 + CT-rich Low_complexity Low_complexity 3 51 0 2 715 353 299 149 6 chr13 17161588 17161763 -103122549 - MLT1B LTR MaLR -187 203 4 2 715 283 333 0 0 chr13 17161774 17161849 -103122463 - MER5A1 DNA MER1_type -91 75 1 2 715 275 246 7 0 chr13 17162019 17162161 -103122151 + (CA)n Simple_repeat Simple_repeat 2 144 0 2 715 1323 235 58 11 chr13 17162616 17162977 -103121335 + Lx8 LINE L1 6916 7293 -180 2 715 245 197 0 16 chr13 17163006 17163068 -103121244 + C-rich Low_complexity Low_complexity 1 61 0 2 715 211 234 0 0 chr13 17163192 17163239 -103121073 + A-rich Low_complexity Low_complexity 2 48 0 2 715 330 375 137 20 chr13 17163305 17164135 -103120177 - L2 LINE L2 -2143 1276 350 2 715 402 344 29 59 chr13 17164227 17164397 -103119915 + MLT1J2 LTR MaLR 16 180 -268 2 715 909 322 54 45 chr13 17164695 17165143 -103119169 + MLT1F LTR MaLR 34 485 -63 2 715 414 0 0 0 chr13 17167859 17167905 -103116407 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 715 326 356 22 6 chr13 17169874 17170052 -103114260 + B3A SINE B2 2 182 -16 2 716 552 30 0 0 chr13 17171127 17171193 -103113119 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 716 641 345 107 43 chr13 17171630 17172090 -103112222 + MLT1F2 LTR MaLR 79 567 -2 2 716 996 252 44 63 chr13 17172250 17172764 -103111548 + RMER6D LTR ERVK 111 624 -66 2 716 649 308 147 30 chr13 17172627 17173029 -103111283 - MLT1C LTR MaLR -16 451 3 2 716 279 79 0 0 chr13 17174033 17174071 -103110241 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 716 201 94 0 0 chr13 17174071 17174103 -103110209 + (GA)n Simple_repeat Simple_repeat 1 32 0 2 716 260 297 99 0 chr13 17177717 17177818 -103106494 + PB1D10 SINE Alu 1 111 -6 2 716 365 0 22 0 chr13 17178629 17178674 -103105638 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 716 254 135 19 19 chr13 17179445 17179498 -103104814 - RMER4B LTR ERVK 0 585 533 2 716 2401 144 126 52 chr13 17179533 17180073 -103104239 - RMER6C LTR ERVK 0 690 111 2 716 1209 209 97 40 chr13 17180214 17180513 -103103799 + RMER4B LTR ERVK 173 488 -97 2 716 288 0 0 0 chr13 17180649 17180681 -103103631 + (T)n Simple_repeat Simple_repeat 1 32 0 2 716 189 0 0 0 chr13 17180774 17180795 -103103517 + (A)n Simple_repeat Simple_repeat 1 21 0 2 716 367 340 108 86 chr13 17181075 17181426 -103102886 + MLT1G1 LTR MaLR 154 512 -67 2 716 748 56 269 0 chr13 17181735 17181843 -103102469 + B1_Mus1 SINE Alu 3 139 -9 2 716 22 0 0 0 chr13 17181879 17181901 -103102411 + AT_rich Low_complexity Low_complexity 1 22 0 2 716 286 274 60 34 chr13 17182254 17182371 -103101941 - L1MEd LINE L1 -4877 1242 1123 2 716 22 0 0 0 chr13 17182810 17182832 -103101480 + AT_rich Low_complexity Low_complexity 1 22 0 2 716 351 0 0 0 chr13 17182850 17182889 -103101423 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 716 354 326 128 8 chr13 17182902 17183035 -103101277 - RSINE1 SINE B4 -13 152 4 2 716 1240 45 0 0 chr13 17183899 17184054 -103100258 + B2_Mm2 SINE B2 3 157 -38 2 716 1047 79 0 0 chr13 17184054 17184193 -103100119 + B1_Mm SINE Alu 9 147 0 2 716 242 276 0 0 chr13 17185194 17185252 -103099060 + GA-rich Low_complexity Low_complexity 1 58 0 2 716 350 42 21 0 chr13 17185849 17185897 -103098415 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 716 180 0 0 0 chr13 17185897 17185917 -103098395 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 716 180 304 29 14 chr13 17186008 17186078 -103098234 + MIRc SINE MIR 48 118 -150 2 716 1068 265 94 10 chr13 17186112 17186409 -103097903 + MTEb LTR MaLR 53 374 -5 2 716 279 0 0 0 chr13 17186630 17186661 -103097651 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 716 561 68 0 0 chr13 17187197 17187271 -103097041 + (TC)n Simple_repeat Simple_repeat 1 74 0 2 716 1042 225 228 82 chr13 17187992 17188457 -103095855 + MT2A LTR ERVL 1 533 0 2 716 259 254 27 27 chr13 17188468 17188541 -103095771 - RLTR31_Mur LTR ERVK 0 553 481 2 716 989 300 89 43 chr13 17188583 17189067 -103095245 - RLTR17 LTR ERVK -114 578 74 2 716 34 42 0 0 chr13 17189623 17189671 -103094641 + AT_rich Low_complexity Low_complexity 1 48 0 2 716 198 0 0 0 chr13 17191259 17191281 -103093031 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 716 330 296 94 134 chr13 17191380 17191731 -103092581 + LTR85a LTR Gypsy? 22 358 -344 2 716 952 138 11 11 chr13 17192093 17192269 -103092043 + GA-rich Low_complexity Low_complexity 3 178 0 2 716 31 58 0 0 chr13 17192745 17192797 -103091515 + AT_rich Low_complexity Low_complexity 1 52 0 2 716 972 132 0 23 chr13 17192909 17193080 -103091232 - L1_Mm LINE L1 -809 5074 4908 2 716 1367 115 0 22 chr13 17193081 17193304 -103091008 + Lx LINE L1 6432 6649 -5 2 716 295 289 30 36 chr13 17194345 17194463 -103089849 - MIR3 SINE MIR -154 122 3 2 716 264 299 21 21 chr13 17194640 17194780 -103089532 + (CATA)n Simple_repeat Simple_repeat 2 141 0 2 716 222 152 14 57 chr13 17194790 17194860 -103089452 + (CATATA)n Simple_repeat Simple_repeat 4 70 0 2 716 350 232 30 12 chr13 17194915 17195081 -103089231 + (CA)n Simple_repeat Simple_repeat 2 170 0 2 716 209 304 14 0 chr13 17195333 17195402 -103088910 + GA-rich Low_complexity Low_complexity 5 74 0 2 716 1618 308 104 39 chr13 17197631 17198416 -103085896 + Lx9 LINE L1 6412 7267 -377 2 716 573 242 219 24 chr13 17198416 17198585 -103085727 + B3 SINE B2 3 204 -12 2 716 1618 308 104 39 chr13 17198585 17198784 -103085528 + Lx9 LINE L1 7268 7460 -184 2 716 2280 178 33 59 chr13 17199254 17199389 -103084923 + RLTR31_Mm LTR ERVK 1 133 -428 2 716 423 0 0 0 chr13 17199389 17199436 -103084876 + (GGA)n Simple_repeat Simple_repeat 2 48 0 2 716 2280 178 33 59 chr13 17199436 17199874 -103084438 + RLTR31_Mm LTR ERVK 134 559 -2 2 716 22 0 0 0 chr13 17200454 17200476 -103083836 + AT_rich Low_complexity Low_complexity 1 22 0 2 716 22 56 0 0 chr13 17202189 17202225 -103082087 + AT_rich Low_complexity Low_complexity 1 36 0 2 716 334 270 54 31 chr13 17202651 17202781 -103081531 - MIR SINE MIR 0 262 130 2 716 1190 278 22 92 chr13 17203021 17203469 -103080843 - MTD LTR MaLR 0 419 3 2 716 217 290 94 61 chr13 17203475 17203655 -103080657 - MIR SINE MIR -13 249 64 2 716 378 0 0 0 chr13 17203907 17203949 -103080363 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 2 716 497 167 21 0 chr13 17203949 17204045 -103080267 + URR1B DNA MER1_type 43 140 -85 2 716 1790 155 3 38 chr13 17204080 17204423 -103079889 + Lx2 LINE L1 6666 6996 -1 2 716 21 0 0 0 chr13 17204437 17204458 -103079854 + AT_rich Low_complexity Low_complexity 1 21 0 2 716 469 204 11 0 chr13 17204467 17204560 -103079752 + URR1B DNA MER1_type 132 225 0 2 716 247 333 11 0 chr13 17204623 17204716 -103079596 + MIR SINE MIR 64 157 -105 2 716 6706 103 34 14 chr13 17204796 17205843 -103078469 + Lx LINE L1 5587 6654 0 2 716 202 385 0 49 chr13 17206636 17206759 -103077553 - MIRb SINE MIR -61 207 91 2 716 3225 58 0 0 chr13 17206871 17207268 -103077044 - L1_Mus1 LINE L1 0 6567 6171 2 716 275 307 45 0 chr13 17208439 17208527 -103075785 + MIRb SINE MIR 169 260 -8 2 716 333 68 0 0 chr13 17208532 17208576 -103075736 + (TTA)n Simple_repeat Simple_repeat 1 44 0 2 716 189 0 0 0 chr13 17209085 17209106 -103075206 + (T)n Simple_repeat Simple_repeat 1 21 0 2 716 5792 125 33 3 chr13 17209106 17210021 -103074291 + Lx LINE L1 5662 6603 -51 2 716 403 252 20 0 chr13 17210178 17210277 -103074035 - Lx8 LINE L1 -557 6916 6816 2 716 285 189 0 36 chr13 17210377 17210432 -103073880 - RLTR9A2 LTR ERVK 0 383 331 2 716 817 68 34 8 chr13 17210459 17210577 -103073735 - RLTR13B1 LTR ERVK 0 893 773 2 716 259 309 147 7 chr13 17210768 17210918 -103073394 + L2 LINE L2 2369 2539 -880 3 716 244 204 23 0 chr13 17211367 17211411 -103072901 + ID4_ SINE ID 8 52 -31 3 716 220 139 0 44 chr13 17212962 17213007 -103071305 + GA-rich Low_complexity Low_complexity 4 46 0 3 716 286 349 16 16 chr13 17213422 17213550 -103070762 + Lx8 LINE L1 7125 7252 -221 3 716 1490 189 47 3 chr13 17213755 17214073 -103070239 + Lx4B LINE L1 6723 7054 -4 3 716 749 287 58 21 chr13 17214223 17214465 -103069847 - Lx5 LINE L1 -225 6825 6575 3 716 548 259 16 186 chr13 17214465 17214659 -103069653 + ID_B1 SINE B4 46 206 -18 3 716 22 56 0 0 chr13 17215716 17215752 -103068560 + AT_rich Low_complexity Low_complexity 1 36 0 3 716 660 296 0 23 chr13 17215819 17215995 -103068317 + Lx9 LINE L1 6358 6529 -1115 3 716 213 39 0 0 chr13 17216545 17216571 -103067741 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 3 716 1664 228 48 19 chr13 17216835 17217317 -103066995 - L1_Rod LINE L1 -89 5758 5263 3 716 2074 316 67 57 chr13 17217318 17218861 -103065451 + Lx9 LINE L1 5787 7458 -186 3 716 1143 204 0 13 chr13 17219889 17220117 -103064195 + URR1B DNA MER1_type 1 225 0 3 716 851 183 92 67 chr13 17221008 17221358 -103062954 - RMER6D LTR ERVK 0 720 478 3 716 6304 118 20 10 chr13 17221360 17222319 -103061993 + Lx3C LINE L1 5996 6963 -13 3 716 315 0 0 0 chr13 17222319 17222354 -103061958 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 716 1776 157 82 28 chr13 17222359 17222713 -103061599 + RLTR11A LTR ERVK 147 519 -9 3 716 1523 110 20 8 chr13 17222719 17222967 -103061345 + RLTR11B LTR ERVK 203 453 0 3 716 288 209 15 15 chr13 17223635 17223703 -103060609 - tRNA-Ala-GCA tRNA tRNA -3 72 5 3 716 489 266 89 0 chr13 17223736 17223860 -103060452 - ID_B1 SINE B4 -4 220 86 3 716 393 303 83 0 chr13 17223894 17224003 -103060309 + PB1D9 SINE Alu 2 119 -1 3 716 1710 144 89 24 chr13 17224303 17224319 -103059993 - RMER6D LTR ERVK -296 394 379 3 716 966 83 0 0 chr13 17224319 17224452 -103059860 + (GAAAA)n Simple_repeat Simple_repeat 3 135 0 3 716 1824 118 83 14 chr13 17224452 17224659 -103059653 - RMER6D LTR ERVK -312 378 153 3 716 1578 55 28 0 chr13 17224659 17224877 -103059435 + L1_Mus3 LINE L1 6412 6635 -3 3 716 1824 114 82 12 chr13 17224877 17225022 -103059290 - RMER6D LTR ERVK -565 155 2 3 716 505 328 0 0 chr13 17225022 17225150 -103059162 + RSINE1 SINE B4 38 165 0 3 716 582 293 88 79 chr13 17225268 17225675 -103058637 - MLT1I LTR MaLR 0 411 1 3 716 216 67 0 0 chr13 17225753 17225783 -103058529 + (T)n Simple_repeat Simple_repeat 1 30 0 3 716 213 96 96 0 chr13 17225890 17225942 -103058370 + (TTATA)n Simple_repeat Simple_repeat 5 61 0 3 716 296 48 24 0 chr13 17226045 17226087 -103058225 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 716 350 101 14 0 chr13 17227947 17228016 -103056296 + (TC)n Simple_repeat Simple_repeat 2 71 0 3 716 348 83 0 0 chr13 17228018 17228066 -103056246 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 716 829 262 247 71 chr13 17228069 17228506 -103055806 - MT2B LTR ERVL -70 531 1 3 716 726 44 0 0 chr13 17228896 17228986 -103055326 + (GA)n Simple_repeat Simple_repeat 1 90 0 3 716 22 0 0 0 chr13 17229691 17229713 -103054599 + AT_rich Low_complexity Low_complexity 1 22 0 3 716 307 257 43 0 chr13 17229779 17229849 -103054463 + B4A SINE B4 11 83 -209 3 716 405 0 0 0 chr13 17229854 17229899 -103054413 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 716 279 0 0 0 chr13 17229899 17229929 -103054383 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 716 266 0 29 0 chr13 17230004 17230038 -103054274 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 3 716 2141 263 83 32 chr13 17230044 17230874 -103053438 + Lx9 LINE L1 6419 7290 -354 3 716 274 159 111 0 chr13 17230941 17231067 -103053245 + Lx9 LINE L1 7483 7622 -22 3 716 2791 82 21 8 chr13 17232052 17232435 -103051877 - L1Md_F2 LINE L1 -14 6568 6181 3 716 469 291 60 44 chr13 17232770 17232953 -103051359 - MER3 DNA MER1_type -21 188 3 3 716 728 161 92 0 chr13 17233339 17233469 -103050843 + B1_Mus1 SINE Alu 1 142 -6 3 716 11624 79 22 2 chr13 17234964 17237376 -103046936 + L1_Mus2 LINE L1 4108 6565 -1 3 716 237 355 52 57 chr13 17237773 17237967 -103046345 + MIRc SINE MIR 72 264 -4 3 716 36809 5 0 0 chr13 17239356 17244727 -103039585 + L1Md_A LINE L1 214 5586 -297 3 716 9070 2 0 0 chr13 17244727 17245723 -103038589 + L1Md_A LINE L1 5587 6582 0 3 716 300 138 89 0 chr13 17245774 17245858 -103038454 + L1_Mur1 LINE L1 690 739 -6243 3 716 450 164 0 0 chr13 17245833 17245906 -103038406 + Lx3B LINE L1 6502 6574 -399 3 716 5394 108 3 0 chr13 17245926 17246694 -103037618 - L1_Mus4 LINE L1 -5 6631 5862 3 716 1836 72 0 39 chr13 17246737 17246997 -103037315 - L1Md_F3 LINE L1 -3 6581 6332 3 716 10913 34 1 0 chr13 17246997 17248866 -103035446 + L1Md_F3 LINE L1 4497 6366 -216 3 716 2246 166 7 38 chr13 17248866 17249292 -103035020 + Lx3B LINE L1 6561 6973 0 3 716 202 316 75 12 chr13 17250758 17250838 -103033474 + L2a LINE L2 3340 3424 -2 3 716 236 358 48 32 chr13 17252115 17252239 -103032073 - L2a LINE L2 -22 3404 3279 3 716 280 206 0 0 chr13 17252241 17252304 -103032008 + Lx8 LINE L1 6889 6951 -522 3 716 21 0 0 0 chr13 17252406 17252427 -103031885 + AT_rich Low_complexity Low_complexity 1 21 0 3 716 231 255 0 0 chr13 17252427 17252478 -103031834 - L1_Mur3 LINE L1 -3316 2564 2514 3 716 1056 253 69 8 chr13 17252483 17252897 -103031415 + L1_Mur3 LINE L1 4155 4629 -1517 3 716 238 301 0 41 chr13 17252873 17252970 -103031342 - L1M2 LINE L1 -1037 5106 5014 3 716 606 265 38 4 chr13 17252980 17253245 -103031067 + L1_Mur3 LINE L1 3209 3482 -2398 3 716 1064 268 101 3 chr13 17253241 17253578 -103030734 + Lx2B LINE L1 6621 6990 -10 3 716 1432 261 76 16 chr13 17253639 17254273 -103030039 + L1_Mur3 LINE L1 3462 4133 -1747 3 716 23 92 0 0 chr13 17255549 17255614 -103028698 + AT_rich Low_complexity Low_complexity 1 65 0 3 716 645 306 39 68 chr13 17255869 17256149 -103028163 + B4A SINE B4 3 274 -18 3 716 537 105 0 0 chr13 17256174 17256260 -103028052 + (CA)n Simple_repeat Simple_repeat 2 87 0 3 716 233 313 36 12 chr13 17258002 17258086 -103026226 - LTR36 LTR ERV1 -43 568 483 3 716 314 275 25 0 chr13 17258592 17258672 -103025640 - ID4_ SINE ID 0 83 2 3 716 2107 178 71 2 chr13 17258933 17259327 -103024985 + MTC LTR MaLR 1 421 0 3 716 289 356 33 7 chr13 17261161 17261322 -103022990 - MIRb SINE MIR -95 173 6 3 716 231 114 0 0 chr13 17261322 17261357 -103022955 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 3 716 409 191 106 0 chr13 17261452 17261546 -103022766 + B1_Mur1 SINE Alu 6 109 -40 3 716 3213 56 8 0 chr13 17261738 17262131 -103022181 + MTA_Mm LTR MaLR 1 396 0 3 716 7677 73 9 65 chr13 17262131 17263294 -103021018 + MTA_Mm-int LTR MaLR 1 1098 0 3 716 3282 48 5 0 chr13 17263294 17263688 -103020624 + MTA_Mm LTR MaLR 1 396 0 3 716 424 237 175 95 chr13 17263893 17264145 -103020167 + B4 SINE B4 3 274 -18 3 716 34 42 0 0 chr13 17264272 17264320 -103019992 + AT_rich Low_complexity Low_complexity 1 48 0 3 716 346 344 130 4 chr13 17266577 17266808 -103017504 - L2a LINE L2 -252 3174 2915 3 716 217 394 0 0 chr13 17267061 17267127 -103017185 + B4A SINE B4 84 149 -143 3 716 411 328 0 5 chr13 17267068 17267182 -103017130 + B1F1 SINE Alu 6 116 -1 3 716 309 340 98 49 chr13 17267332 17267598 -103016714 - B4 SINE B4 -11 281 3 3 716 233 257 91 9 chr13 17268299 17268409 -103015903 - L1ME4a LINE L1 -70 6054 5936 3 716 333 243 13 26 chr13 17268659 17268735 -103015577 - ID4 SINE ID -1 82 8 3 716 303 254 42 56 chr13 17269553 17269695 -103014617 + L1MCc LINE L1 110 249 -6174 3 716 238 33 0 0 chr13 17269771 17269801 -103014511 + U6 snRNA snRNA 1 30 -77 3 716 888 259 14 19 chr13 17270929 17271145 -103013167 - B3 SINE B2 0 216 2 3 716 406 235 58 10 chr13 17272327 17272430 -103011882 + B1F SINE Alu 21 128 -21 3 716 248 188 107 19 chr13 17273793 17273896 -103010416 - L1MB4 LINE L1 -8 6172 6061 3 716 370 304 146 16 chr13 17273865 17274180 -103010132 - L1MB5 LINE L1 -324 5850 5494 3 716 287 264 172 7 chr13 17274243 17274388 -103009924 + Ricksha_c DNA MuDR 12 180 -1868 3 716 2362 122 43 136 chr13 17275551 17276043 -103008269 - RLTR41 LTR ERV1 0 446 1 3 716 24 67 0 0 chr13 17279128 17279173 -103005139 + AT_rich Low_complexity Low_complexity 1 45 0 3 716 541 257 132 43 chr13 17279431 17279711 -103004601 + L1MC1 LINE L1 6014 6318 -15 3 716 286 286 122 0 chr13 17280363 17280461 -103003851 + MLT2B4 LTR ERVL 371 480 -76 3 716 217 304 176 28 chr13 17280726 17280868 -103003444 + MIR3 SINE MIR 46 208 0 3 716 273 75 0 0 chr13 17283222 17283262 -103001050 + (CAA)n Simple_repeat Simple_repeat 3 42 0 3 716 1305 278 92 11 chr13 17283443 17283898 -103000414 - Lx9 LINE L1 -4 7640 7149 3 716 1925 251 145 13 chr13 17285495 17286019 -102998293 + RMER20B LTR ERVK 21 613 -14 3 716 267 254 0 43 chr13 17286019 17286089 -102998223 + RMER20B LTR ERVK 537 603 -24 3 716 327 25 0 0 chr13 17286432 17286472 -102997840 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 716 1257 254 27 15 chr13 17287392 17287720 -102996592 + ORR1D2 LTR MaLR 35 366 -4 3 716 416 60 23 35 chr13 17287736 17287823 -102996489 + (CAAAAA)n Simple_repeat Simple_repeat 5 90 0 3 716 2291 286 80 39 chr13 17287832 17289078 -102995234 + Lx8 LINE L1 4897 6183 -1290 3 716 216 0 0 0 chr13 17289078 17289102 -102995210 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 716 1819 303 63 69 chr13 17289102 17289172 -102995140 + Lx8 LINE L1 6184 6248 -1225 3 716 1102 198 42 0 chr13 17289172 17289389 -102994923 + URR1A DNA MER1_type 1 226 0 3 716 1819 303 63 69 chr13 17289389 17289772 -102994540 + Lx8 LINE L1 6249 6641 -832 3 716 956 116 6 6 chr13 17289915 17290089 -102994223 + Lx LINE L1 6479 6652 -2 3 716 26 0 0 0 chr13 17290102 17290128 -102994184 + AT_rich Low_complexity Low_complexity 1 26 0 3 716 243 0 0 0 chr13 17290138 17290165 -102994147 + (A)n Simple_repeat Simple_repeat 1 27 0 3 716 1371 62 0 0 chr13 17291665 17291843 -102992469 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 4 716 15397 44 2 1 chr13 17292354 17295851 -102988461 - L1Md_Gf LINE L1 -2629 3257 1 4 716 718 64 0 0 chr13 17295853 17295947 -102988365 + L1_Mm LINE L1 5309 5402 -481 4 716 2462 4 0 0 chr13 17295947 17296222 -102988090 + L1Md_T LINE L1 6308 6582 0 4 716 21 0 0 0 chr13 17296222 17296243 -102988069 + AT_rich Low_complexity Low_complexity 1 21 0 4 716 249 33 0 0 chr13 17296249 17296279 -102988033 + (A)n Simple_repeat Simple_repeat 1 30 0 4 716 3167 48 0 7 chr13 17296815 17297218 -102987094 + L1Md_F2 LINE L1 6178 6577 -5 4 716 25 51 0 0 chr13 17297467 17297506 -102986806 + AT_rich Low_complexity Low_complexity 1 39 0 4 716 833 84 0 0 chr13 17297854 17297961 -102986351 + U6 snRNA snRNA 1 107 0 4 89 27101 77 7 41 chr13 17297961 17301935 -102982377 + L1Md_F2 LINE L1 1750 5586 -297 4 717 8227 39 2 1 chr13 17301935 17302930 -102981382 + L1Md_F2 LINE L1 5587 6582 0 4 717 252 0 0 0 chr13 17305509 17305537 -102978775 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 717 533 319 19 0 chr13 17305826 17305983 -102978329 + B3A SINE B2 1 160 -38 4 717 256 253 66 0 chr13 17306035 17306126 -102978186 + Lx7 LINE L1 7596 7692 -4 4 717 189 0 0 0 chr13 17306410 17306431 -102977881 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 717 383 375 35 7 chr13 17306489 17306634 -102977678 - MIR SINE MIR -113 149 1 4 717 181 131 43 21 chr13 17308929 17308976 -102975336 + CT-rich Low_complexity Low_complexity 4 51 0 4 717 1036 58 0 7 chr13 17309899 17310039 -102974273 - L1Md_F2 LINE L1 -13 6569 6431 4 717 310 301 97 0 chr13 17310913 17311016 -102973296 - L1MC4a LINE L1 -6 7876 7764 4 717 279 176 176 0 chr13 17311046 17311114 -102973198 + L1MC4a LINE L1 7556 7635 -247 4 717 515 248 93 6 chr13 17311156 17311318 -102972994 + L1M2 LINE L1 5463 5638 -674 4 717 392 298 108 32 chr13 17311376 17311828 -102972484 + L1MB8 LINE L1 5494 5994 -186 4 717 352 255 20 10 chr13 17312056 17312155 -102972157 + L1MD2 LINE L1 6022 6121 -238 4 717 1362 170 0 0 chr13 17312942 17313166 -102971146 + URR1A DNA MER1_type 1 224 -2 4 717 813 307 68 52 chr13 17313173 17313541 -102970771 - Lx8 LINE L1 -853 6620 6247 4 717 587 257 146 32 chr13 17313911 17314275 -102970037 - Lx8 LINE L1 -1671 5973 5539 4 717 1090 307 150 25 chr13 17314348 17314887 -102969425 + Lx8 LINE L1 6868 7473 0 4 717 238 237 155 0 chr13 17314906 17315003 -102969309 + L1M4b LINE L1 810 921 -6413 4 717 866 260 76 36 chr13 17315325 17315600 -102968712 - RMER13A LTR ERVK -477 383 98 4 717 820 280 73 27 chr13 17316033 17316441 -102967871 + L1M4b LINE L1 1372 1798 -5536 4 717 540 237 108 19 chr13 17316522 17316770 -102967542 + L1M4b LINE L1 1995 2270 -4738 4 717 180 111 0 0 chr13 17316889 17316916 -102967396 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 717 402 21 0 0 chr13 17316916 17316962 -102967350 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 717 278 259 123 65 chr13 17316980 17317087 -102967225 + L1M4b LINE L1 2553 2652 -4682 4 717 2842 152 109 13 chr13 17317087 17317621 -102966691 - RMER4B LTR ERVK 0 585 1 4 717 278 259 123 65 chr13 17317621 17317790 -102966522 + L1M4b LINE L1 2653 2845 -4489 4 717 2205 113 28 0 chr13 17317796 17318114 -102966198 + ORR1A2 LTR MaLR 1 327 0 4 717 416 268 254 30 chr13 17318133 17318593 -102965719 + L1MA4 LINE L1 5336 5898 -402 4 717 366 255 181 27 chr13 17318822 17319120 -102965192 + L1M4b LINE L1 3261 3604 -3396 4 717 222 62 0 0 chr13 17319322 17319354 -102964958 + (CAGAGA)n Simple_repeat Simple_repeat 3 34 0 4 717 4880 50 2 0 chr13 17319397 17319996 -102964316 - L1Md_F2 LINE L1 0 6582 5983 4 717 986 73 0 7 chr13 17320025 17320162 -102964150 + B1_Mus1 SINE Alu 13 148 0 4 717 8426 25 0 0 chr13 17320778 17322078 -102962234 - L1Md_T LINE L1 0 6582 5283 4 717 12869 33 3 46 chr13 17322085 17324592 -102959720 - L1Md_T LINE L1 -3046 2837 445 4 717 25 0 0 0 chr13 17324678 17324703 -102959609 + AT_rich Low_complexity Low_complexity 1 25 0 4 717 782 209 55 0 chr13 17325415 17325578 -102958734 + Lx9 LINE L1 5673 5844 -3 4 717 282 257 57 0 chr13 17325576 17325646 -102958666 + Lx9 LINE L1 6407 6480 -1164 4 717 1243 242 69 38 chr13 17325641 17326062 -102958250 + Lx9 LINE L1 7203 7636 -8 4 717 222 192 0 0 chr13 17326323 17326375 -102957937 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 717 2044 198 13 76 chr13 17326375 17326739 -102957573 - MTC LTR MaLR 0 421 80 4 717 4542 59 0 5 chr13 17326739 17327319 -102956993 - L1Md_F3 LINE L1 -14 6570 5994 4 717 2044 198 13 76 chr13 17327319 17327403 -102956909 - MTC LTR MaLR -342 79 1 4 717 284 291 68 34 chr13 17328280 17328426 -102955886 + MER33 DNA MER1_type 25 175 -149 4 717 2732 119 112 0 chr13 17329797 17330251 -102954061 + L1Md_F LINE L1 481 985 -5534 4 717 628 235 158 16 chr13 17330252 17330499 -102953813 + Lx8 LINE L1 6618 6899 -574 4 717 23222 79 3 24 chr13 17330510 17335094 -102949218 + L1Md_F2 LINE L1 972 5589 -297 4 717 7304 65 26 2 chr13 17335094 17336067 -102948245 + L1Md_F2 LINE L1 5590 6585 0 4 717 462 18 0 0 chr13 17336153 17336208 -102948104 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 717 387 106 0 0 chr13 17336252 17336318 -102947994 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 717 1599 181 84 3 chr13 17338349 17338693 -102945619 - ORR1D1 LTR MaLR -2 372 1 4 717 378 221 105 0 chr13 17339230 17339316 -102944996 - B1F SINE Alu -45 104 10 4 717 23 0 0 0 chr13 17340035 17340058 -102944254 + AT_rich Low_complexity Low_complexity 1 23 0 4 717 14339 94 16 5 chr13 17340419 17343601 -102940711 + Lx3_Mus LINE L1 3794 7009 0 4 717 370 304 113 130 chr13 17346721 17346906 -102937406 + B3A SINE B2 2 183 -15 4 717 779 86 8 0 chr13 17346920 17347037 -102937275 + (TAGA)n Simple_repeat Simple_repeat 4 121 0 4 717 261 294 11 11 chr13 17347231 17347324 -102936988 + L1MA4A LINE L1 5818 5910 -393 4 717 23 54 0 0 chr13 17347490 17347527 -102936785 + AT_rich Low_complexity Low_complexity 1 37 0 4 717 1510 241 22 42 chr13 17347665 17348067 -102936245 + Lx5 LINE L1 6654 7047 -3 4 717 398 20 20 0 chr13 17348222 17348273 -102936039 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 4 717 286 315 120 0 chr13 17348463 17348571 -102935741 - MIRb SINE MIR -32 236 116 4 717 22 35 0 0 chr13 17349333 17349362 -102934950 + AT_rich Low_complexity Low_complexity 1 29 0 4 717 1001 255 78 20 chr13 17349914 17350210 -102934102 - Lx7 LINE L1 -610 7086 6774 4 717 495 282 14 27 chr13 17350215 17350361 -102933951 + Lx8 LINE L1 7104 7247 -226 4 717 5259 239 71 57 chr13 17351774 17352574 -102931738 + Lx9 LINE L1 900 1753 -4094 4 717 336 24 0 0 chr13 17352574 17352615 -102931697 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 717 5259 246 83 97 chr13 17352615 17353980 -102930332 + Lx9 LINE L1 1754 3155 -2692 4 717 1163 61 0 7 chr13 17353980 17354128 -102930184 + B1_Mus2 SINE Alu 1 147 0 4 717 5259 246 83 97 chr13 17354128 17355070 -102929242 + Lx9 LINE L1 3156 3985 -1862 4 717 874 265 101 45 chr13 17355078 17355434 -102928878 + Lx9 LINE L1 4648 5023 -824 4 717 2082 295 68 23 chr13 17355459 17356428 -102927884 + Lx9 LINE L1 5685 6815 -829 4 717 252 248 52 22 chr13 17356445 17356581 -102927731 + (TTATA)n Simple_repeat Simple_repeat 5 144 0 4 717 28 0 0 0 chr13 17356730 17356758 -102927554 + AT_rich Low_complexity Low_complexity 1 28 0 4 717 1292 126 14 0 chr13 17356888 17357095 -102927217 - Lx2 LINE L1 -13 6984 6775 4 717 3146 119 78 0 chr13 17357095 17357583 -102926729 - Lx2 LINE L1 -354 6643 6118 4 717 2169 140 7 8 chr13 17357569 17357955 -102926357 - L1VL4 LINE L1 -5801 501 1 4 717 648 230 157 0 chr13 17358339 17358517 -102925795 + ORR1D2-int LTR MaLR 1036 1241 -129 4 717 1126 107 16 58 chr13 17358517 17358706 -102925606 + L1VL4 LINE L1 231 411 -5891 4 717 511 157 0 0 chr13 17358725 17358808 -102925504 + ORR1D2-int LTR MaLR 1288 1370 0 4 717 1137 250 171 0 chr13 17358808 17359124 -102925188 + ORR1D2 LTR MaLR 1 370 0 4 717 21 0 0 0 chr13 17359527 17359548 -102924764 + AT_rich Low_complexity Low_complexity 1 21 0 4 717 297 0 0 0 chr13 17359833 17359866 -102924446 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 717 6401 159 27 24 chr13 17359939 17361106 -102923206 - Lx2B LINE L1 -3 6997 5827 4 717 2499 58 3 6 chr13 17361120 17361449 -102922863 - L1_Mus1 LINE L1 -2 6565 6238 4 717 3792 188 17 1 chr13 17361449 17362169 -102922143 - L1_Mm LINE L1 -67 5816 5086 4 717 2595 155 30 0 chr13 17362168 17362451 -102921861 + L1_Mur2 LINE L1 4430 4726 -1151 4 717 194 0 39 0 chr13 17362451 17362477 -102921835 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 717 2595 155 30 0 chr13 17362477 17362664 -102921648 + L1_Mur2 LINE L1 4727 4913 -964 4 717 366 341 40 31 chr13 17362673 17362897 -102921415 - B4A SINE B4 -62 230 5 4 717 215 296 56 22 chr13 17362974 17363064 -102921248 + MIR SINE MIR 149 241 -21 4 717 4426 77 3 0 chr13 17363981 17364556 -102919756 - L1_Mus2 LINE L1 -2 6564 5988 4 717 3147 156 19 15 chr13 17364556 17365334 -102918978 + L1_Mus2 LINE L1 5432 6199 -1497 4 717 414 0 0 0 chr13 17365334 17365380 -102918932 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 717 2088 327 57 33 chr13 17365380 17365474 -102918838 + L1_Mus2 LINE L1 6200 6301 -1172 4 717 540 0 0 0 chr13 17365474 17365534 -102918778 + (TTTTG)n Simple_repeat Simple_repeat 3 62 0 4 717 2088 324 59 31 chr13 17365534 17366411 -102917901 + L1_Mus2 LINE L1 6302 7194 -279 4 717 2263 136 48 0 chr13 17366979 17367333 -102916979 + RMER19A LTR ERVK 1 371 -366 4 717 14880 121 14 22 chr13 17367333 17369809 -102914503 - L1_Mm LINE L1 -1487 4396 1941 4 717 28144 57 4 22 chr13 17369812 17373559 -102910753 + L1_Mm LINE L1 1905 5586 -297 4 717 8150 41 2 1 chr13 17373559 17374556 -102909756 + L1Md_F3 LINE L1 5587 6584 0 4 717 28144 57 4 22 chr13 17374556 17374571 -102909741 + L1_Mm LINE L1 5587 5601 -282 4 717 234 75 36 36 chr13 17374572 17374627 -102909685 + (CAAAAA)n Simple_repeat Simple_repeat 4 58 0 4 717 635 157 32 16 chr13 17374851 17374974 -102909338 + B1_Mur1 SINE Alu 24 148 -1 4 717 276 149 0 0 chr13 17375251 17375298 -102909014 + (GGGA)n Simple_repeat Simple_repeat 3 49 0 4 717 635 284 104 18 chr13 17375437 17375659 -102908653 - MIR SINE MIR -2 260 20 4 717 211 158 0 0 chr13 17375949 17375987 -102908325 + L2a LINE L2 3386 3423 -3 4 717 234 382 84 12 chr13 17376030 17376197 -102908115 + L3 LINE CR1 3232 3410 -1079 4 717 252 328 56 24 chr13 17376977 17377102 -102907210 + LTR16E1 LTR ERVL 234 362 -176 4 717 289 40 60 0 chr13 17377682 17377732 -102906580 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 4 717 4968 83 64 3 chr13 17377818 17378508 -102905804 + L1_Mus2 LINE L1 5835 6566 0 4 717 3521 136 51 13 chr13 17378517 17379150 -102905162 + Lx LINE L1 5998 6654 0 4 717 25 31 0 0 chr13 17379977 17380009 -102904303 + AT_rich Low_complexity Low_complexity 1 32 0 4 717 352 280 246 0 chr13 17380017 17380135 -102904177 + RSINE1 SINE B4 3 149 -16 4 717 378 337 64 29 chr13 17380348 17380519 -102903793 - MER2 DNA MER2_type 0 345 169 4 717 28 29 0 0 chr13 17382026 17382061 -102902251 + AT_rich Low_complexity Low_complexity 1 35 0 4 717 218 374 0 5 chr13 17382079 17382202 -102902110 + GA-rich Low_complexity Low_complexity 1 122 0 5 717 180 0 0 0 chr13 17382356 17382376 -102901936 + (A)n Simple_repeat Simple_repeat 1 20 0 5 717 283 324 88 0 chr13 17384475 17384577 -102899735 + MTE-int LTR MaLR 1275 1385 -195 5 717 1621 283 166 43 chr13 17384572 17385471 -102898841 + MTD-int LTR MaLR 168 1257 -1 5 717 985 281 114 33 chr13 17385474 17385566 -102898746 + MTD LTR MaLR 8 109 -310 5 717 3952 16 0 0 chr13 17385566 17386017 -102898295 + L1Md_A LINE L1 6132 6582 0 5 717 985 281 114 33 chr13 17386017 17386292 -102898020 + MTD LTR MaLR 110 405 -14 5 717 23 68 0 0 chr13 17386685 17386729 -102897583 + AT_rich Low_complexity Low_complexity 1 44 0 5 717 320 364 10 0 chr13 17386824 17386923 -102897389 + ID_B1 SINE B4 80 179 -45 5 717 558 238 9 0 chr13 17386837 17386942 -102897370 + PB1D10 SINE Alu 12 117 0 5 717 295 336 89 120 chr13 17386989 17387371 -102896941 + ORR1E LTR MaLR 1 370 0 5 717 183 288 77 64 chr13 17387450 17387528 -102896784 - MIRb SINE MIR -95 173 95 5 717 26 0 0 0 chr13 17388680 17388706 -102895606 + AT_rich Low_complexity Low_complexity 1 26 0 5 717 295 355 44 39 chr13 17388706 17388935 -102895377 + L2c LINE L2 3079 3308 -79 5 717 186 43 0 0 chr13 17389403 17389426 -102894886 + (A)n Simple_repeat Simple_repeat 1 23 0 5 717 27 29 0 0 chr13 17390071 17390105 -102894207 + AT_rich Low_complexity Low_complexity 1 34 0 5 717 898 259 46 103 chr13 17391680 17392068 -102892244 + ORR1D1 LTR MaLR 1 366 -8 5 717 261 75 0 0 chr13 17392956 17392996 -102891316 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 5 717 252 59 0 0 chr13 17393130 17393164 -102891148 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 717 277 292 33 60 chr13 17393325 17393507 -102890805 + CR1_Mam LINE CR1 1242 1418 -786 5 717 268 261 11 0 chr13 17395097 17395185 -102889127 - L1MEf LINE L1 -3849 2297 2209 5 717 248 71 0 0 chr13 17395247 17395289 -102889023 - L1_Mus2 LINE L1 -1 6565 6524 5 717 22344 75 3 4 chr13 17395284 17398467 -102885845 + L1_Mm LINE L1 2405 5615 -685 5 717 7366 86 3 1 chr13 17398467 17399448 -102884864 + L1Md_F2 LINE L1 5587 6569 -13 5 717 685 148 0 66 chr13 17399452 17399604 -102884708 - L1Md_F3 LINE L1 -4 6580 6439 5 717 1070 268 29 22 chr13 17399604 17399646 -102884666 + L1_Mm LINE L1 5616 5665 -635 5 717 2290 280 88 18 chr13 17399836 17400695 -102883617 - Lx8 LINE L1 -10 7463 6544 5 717 602 362 29 12 chr13 17400726 17400969 -102883343 - RMER15 LTR ERVL -42 533 287 5 717 277 309 24 148 chr13 17400950 17401159 -102883153 - RMER15 LTR ERVL -390 185 3 5 717 401 253 0 0 chr13 17401160 17401247 -102883065 - RMER15-int LTR ERVL -25 4974 4888 5 717 1005 309 65 5 chr13 17401395 17401792 -102882520 - RMER15-int LTR ERVL -420 4579 4159 5 717 3057 308 45 32 chr13 17401941 17403048 -102881264 - RMER15-int LTR ERVL -2924 2075 955 5 717 731 269 0 0 chr13 17403064 17403209 -102881103 + B1_Mus2 SINE Alu 2 146 -1 5 717 203 204 0 18 chr13 17403212 17403267 -102881045 + (TAA)n Simple_repeat Simple_repeat 1 54 0 5 717 1226 350 42 40 chr13 17403272 17403587 -102880725 - RMER15-int LTR ERVL -4064 935 624 5 717 1241 167 42 0 chr13 17403587 17403803 -102880509 + URR1B DNA MER1_type 1 225 0 5 717 1226 350 38 36 chr13 17403803 17404276 -102880036 - RMER15-int LTR ERVL -4376 623 4 5 717 241 310 224 6 chr13 17404279 17404435 -102879877 - RMER15 LTR ERVL 0 575 386 5 717 385 92 26 0 chr13 17404435 17404511 -102879801 + (CAAAA)n Simple_repeat Simple_repeat 3 80 0 5 717 247 329 93 20 chr13 17404568 17404816 -102879496 - L1MEf LINE L1 -5310 932 667 5 717 530 217 58 8 chr13 17404823 17404944 -102879368 + ETnERV2-int LTR ERVK 7070 7196 -210 5 717 831 241 10 39 chr13 17405335 17405538 -102878774 + B3A SINE B2 1 197 -1 5 717 5967 117 114 8 chr13 17405555 17407068 -102877244 + Lx4B LINE L1 612 2308 -3569 5 717 5011 121 64 1 chr13 17407061 17407971 -102876341 + Lx4B LINE L1 4999 5957 -1101 5 717 4234 152 75 29 chr13 17407971 17408539 -102875773 + Lx4B LINE L1 6173 6762 -296 5 717 324 48 0 0 chr13 17408539 17408581 -102875731 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 717 4234 152 75 29 chr13 17408581 17408849 -102875463 + Lx4B LINE L1 6763 7048 -10 5 717 1847 75 26 4 chr13 17408877 17409125 -102875187 - L1_Mus3 LINE L1 -7 6631 6382 5 717 200 31 0 59 chr13 17409125 17409159 -102875153 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 717 1847 75 26 4 chr13 17409159 17409176 -102875136 - L1_Mus3 LINE L1 -257 6381 6362 5 717 31 26 0 0 chr13 17409187 17409225 -102875087 + AT_rich Low_complexity Low_complexity 1 38 0 5 717 604 344 35 23 chr13 17409230 17409578 -102874734 - L1MD2 LINE L1 -5495 1052 701 5 717 268 340 60 46 chr13 17410083 17410299 -102874013 - MIR SINE MIR -12 250 32 5 717 215 330 29 20 chr13 17410290 17410392 -102873920 + MER5A DNA MER1_type 20 122 -67 5 717 429 20 0 0 chr13 17411448 17411498 -102872814 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 717 285 269 19 19 chr13 17412532 17412691 -102871621 + Lx9 LINE L1 7478 7636 -8 5 717 414 168 18 9 chr13 17412857 17412971 -102871341 + GA-rich Low_complexity Low_complexity 3 117 0 5 717 3303 41 13 0 chr13 17413145 17413536 -102870776 - MTA_Mm LTR MaLR 0 396 1 5 717 8854 41 8 1 chr13 17413536 17414626 -102869686 - MTA_Mm-int LTR MaLR 0 1098 1 5 717 3499 25 2 0 chr13 17414626 17415021 -102869291 - MTA_Mm LTR MaLR 0 396 1 5 717 252 167 79 0 chr13 17415518 17415575 -102868737 + Lx4B LINE L1 6467 6529 -444 5 717 24 0 0 0 chr13 17417037 17417061 -102867251 + AT_rich Low_complexity Low_complexity 1 24 0 5 717 1206 275 140 32 chr13 17417113 17417296 -102867016 + RLTR20B3 LTR ERVK 21 206 -371 5 717 417 39 0 0 chr13 17417296 17417347 -102866965 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 717 1206 275 140 32 chr13 17417347 17417578 -102866734 + RLTR20B3 LTR ERVK 207 469 -108 5 717 531 45 0 0 chr13 17417578 17417644 -102866668 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 717 1206 275 140 32 chr13 17417644 17417691 -102866621 + RLTR20B3 LTR ERVK 470 531 -46 5 717 24 0 0 0 chr13 17417868 17417892 -102866420 + AT_rich Low_complexity Low_complexity 1 24 0 5 717 233 29 29 0 chr13 17419252 17419286 -102865026 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 5 717 944 255 134 45 chr13 17419360 17419813 -102864499 - RLTR16 LTR ERVK -12 493 1 5 717 2499 43 0 3 chr13 17420617 17420921 -102863391 + L1Md_T LINE L1 6275 6577 -5 5 717 34189 52 5 9 chr13 17421086 17426257 -102858055 + L1Md_A LINE L1 98 5586 -297 5 717 8674 23 0 0 chr13 17426257 17427251 -102857061 + L1Md_A LINE L1 5587 6580 -2 5 717 660 26 0 0 chr13 17427637 17427715 -102856597 + (TAAA)n Simple_repeat Simple_repeat 2 79 0 5 717 191 61 30 0 chr13 17428987 17429020 -102855292 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 717 206 200 0 43 chr13 17429459 17429506 -102854806 + L3 LINE CR1 31 75 -4414 5 717 214 287 139 65 chr13 17430942 17431050 -102853262 + MIRc SINE MIR 82 197 -71 5 718 25 65 0 0 chr13 17432770 17432816 -102851496 + AT_rich Low_complexity Low_complexity 1 46 0 5 718 225 0 0 0 chr13 17433609 17433634 -102850678 + (A)n Simple_repeat Simple_repeat 1 25 0 5 718 2662 50 11 63 chr13 17434400 17434782 -102849530 + RLTR10B2 LTR ERVK 4 365 0 5 718 635 231 67 0 chr13 17435303 17435437 -102848875 + B1_Mus1 SINE Alu 5 147 -1 5 718 232 156 185 15 chr13 17435991 17436056 -102848256 + ID4 SINE ID 2 77 -6 5 718 265 260 27 0 chr13 17436056 17436155 -102848157 + (CA)n Simple_repeat Simple_repeat 1 101 0 5 718 207 312 12 24 chr13 17436352 17436434 -102847878 - MIRb SINE MIR -13 255 175 5 718 418 233 131 23 chr13 17436865 17437015 -102847297 + MIR3 SINE MIR 30 202 -6 5 718 253 188 50 151 chr13 17437156 17437275 -102847037 - YREP_Mm Unknown Unknown -1479 333 227 5 718 522 279 0 0 chr13 17437186 17437290 -102847022 + PB1D7 SINE Alu 6 109 -11 5 718 195 42 0 0 chr13 17437290 17437314 -102846998 + (TAA)n Simple_repeat Simple_repeat 2 25 0 5 718 211 390 29 0 chr13 17437894 17437999 -102846313 - MIR SINE MIR -74 188 81 5 718 261 188 25 12 chr13 17438254 17438335 -102845977 + (ATG)n Simple_repeat Simple_repeat 3 84 0 5 718 200 323 50 50 chr13 17439336 17439437 -102844875 + MIRm SINE MIR 41 141 -135 5 718 670 297 9 9 chr13 17439451 17439662 -102844650 - B3 SINE B2 -5 211 1 5 718 6388 82 16 0 chr13 17439784 17440649 -102843663 - L1_Mus4 LINE L1 -8 6628 5750 5 718 270 299 0 15 chr13 17440870 17440938 -102843374 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 5 718 313 275 0 0 chr13 17440879 17440948 -102843364 + ID4_ SINE ID 15 83 0 5 718 274 303 0 26 chr13 17440886 17440964 -102843348 + ID_B1 SINE B4 23 98 -126 5 718 390 21 0 0 chr13 17441151 17441198 -102843114 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 718 420 20 0 0 chr13 17441378 17441427 -102842885 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 718 250 211 117 13 chr13 17442382 17442459 -102841853 + MIRb SINE MIR 158 242 -26 5 718 1198 91 39 11 chr13 17444095 17444273 -102840039 + B2_Mm1a SINE B2 2 184 -9 5 718 189 0 0 0 chr13 17444367 17444388 -102839924 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 718 252 179 14 43 chr13 17444466 17444536 -102839776 + (TCTCTG)n Simple_repeat Simple_repeat 5 72 0 5 718 414 0 0 0 chr13 17444546 17444592 -102839720 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 718 289 333 49 35 chr13 17444592 17444724 -102839588 - MLT1E2 LTR MaLR -123 504 368 5 718 644 283 62 52 chr13 17445870 17446127 -102838185 - MTEa LTR MaLR -118 261 1 5 718 3548 82 16 2 chr13 17446318 17446810 -102837502 - L1_Mus4 LINE L1 -8 6628 6130 5 718 192 350 111 64 chr13 17446872 17447043 -102837269 + L2c LINE L2 3208 3386 -1 5 718 2460 60 3 0 chr13 17447912 17448262 -102836050 + L1Md_T LINE L1 6262 6582 0 5 718 1272 295 93 17 chr13 17448769 17449779 -102834533 + L1MA4 LINE L1 2410 3496 -2647 5 718 291 114 0 0 chr13 17449795 17449839 -102834473 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 718 262 92 37 73 chr13 17449947 17450029 -102834283 + (TTTG)n Simple_repeat Simple_repeat 2 80 0 5 718 577 276 65 6 chr13 17450029 17450197 -102834115 + B3 SINE B2 39 216 0 5 718 457 265 39 22 chr13 17450213 17450412 -102833900 + L1MA4 LINE L1 3577 3797 -2346 5 718 37729 16 1 7 chr13 17450444 17455653 -102828659 + L1Md_A LINE L1 413 5586 -297 5 718 8687 18 1 0 chr13 17455653 17456648 -102827664 + L1Md_A LINE L1 5587 6582 0 5 718 505 314 72 36 chr13 17456649 17456832 -102827480 + L1_Rod LINE L1 3790 3980 -1867 5 718 928 250 219 7 chr13 17456832 17457142 -102827170 - MTE2a LTR MaLR -2 377 2 5 718 505 302 84 22 chr13 17457142 17457342 -102826970 + L1_Rod LINE L1 3981 4228 -1918 5 718 324 221 39 78 chr13 17457344 17457447 -102826865 + L1MA4 LINE L1 4403 4501 -1642 5 718 745 164 6 6 chr13 17457897 17458057 -102826255 + GA-rich Low_complexity Low_complexity 3 162 0 5 718 226 211 51 34 chr13 17458057 17458116 -102826196 + polypurine Low_complexity Low_complexity 2 61 0 5 718 238 255 62 90 chr13 17458283 17458460 -102825852 + L1MA4 LINE L1 5153 5324 -819 5 718 286 333 0 0 chr13 17458473 17458578 -102825734 - L1M2 LINE L1 -555 5742 5638 5 718 411 307 94 0 chr13 17458613 17458825 -102825487 + L1MA4 LINE L1 5363 5594 -706 5 718 380 296 31 26 chr13 17458857 17459048 -102825264 + L1MA4 LINE L1 5708 5899 -401 5 718 1179 58 23 6 chr13 17459148 17459320 -102824992 + (GGAA)n Simple_repeat Simple_repeat 2 176 0 5 718 504 146 49 0 chr13 17459594 17459676 -102824636 + B3 SINE B2 125 210 -6 5 718 468 267 49 22 chr13 17459686 17459793 -102824519 + L1M2 LINE L1 3585 3699 -2444 5 718 4280 24 0 2 chr13 17459793 17460287 -102824025 + MT2_Mm LTR ERVL 1 493 0 6 718 468 267 49 22 chr13 17460287 17460363 -102823949 + L1M2 LINE L1 3700 3773 -2370 5 718 426 207 11 22 chr13 17460364 17460453 -102823859 + B1_Mur1 SINE Alu 53 140 -9 6 718 265 229 16 33 chr13 17460453 17460575 -102823737 + (TTATA)n Simple_repeat Simple_repeat 1 120 0 6 718 721 261 167 85 chr13 17460579 17461376 -102822936 + L1M2 LINE L1 3775 4636 -1507 5 718 298 264 37 44 chr13 17461416 17461551 -102822761 + L1M2 LINE L1 4618 4751 -1389 5 718 819 297 75 18 chr13 17461742 17462020 -102822292 - MTD LTR MaLR -114 305 12 6 718 530 226 98 16 chr13 17462025 17462209 -102822103 + L1M2 LINE L1 4852 5050 -1093 5 718 1186 41 0 26 chr13 17463213 17463365 -102820947 + B1_Mus1 SINE Alu 1 148 0 6 718 1158 77 5 42 chr13 17464263 17464452 -102819860 - Lx2 LINE L1 0 6997 6816 6 718 2524 307 76 54 chr13 17464674 17466053 -102818259 + Lx8 LINE L1 5609 7018 -455 6 718 1630 111 0 0 chr13 17466055 17466280 -102818032 + L1VL4 LINE L1 563 787 -5870 6 718 11590 92 24 12 chr13 17466280 17468407 -102815905 + L1VL4 LINE L1 1121 3338 -2548 6 718 265 211 35 0 chr13 17468407 17468464 -102815848 - B3A SINE B2 -138 60 2 6 718 419 65 0 31 chr13 17468656 17468720 -102815592 + (ATG)n Simple_repeat Simple_repeat 2 63 0 6 718 314 75 38 0 chr13 17469393 17469446 -102814866 + (CATA)n Simple_repeat Simple_repeat 2 56 0 6 718 201 74 0 0 chr13 17471918 17471945 -102812367 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 6 718 6553 128 8 12 chr13 17472232 17473292 -102811020 + Lx2 LINE L1 5938 6993 -4 6 718 228 123 77 0 chr13 17473292 17473357 -102810955 + (TA)n Simple_repeat Simple_repeat 1 70 0 6 718 198 143 0 0 chr13 17473358 17473393 -102810919 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 718 1037 68 7 52 chr13 17473571 17473583 -102810729 - B1_Mm SINE Alu 0 147 139 6 718 243 0 0 0 chr13 17473583 17473610 -102810702 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 718 1037 68 7 52 chr13 17473610 17473751 -102810561 - B1_Mm SINE Alu -9 138 1 6 718 345 134 36 24 chr13 17473775 17473859 -102810453 + CT-rich Low_complexity Low_complexity 4 88 0 6 718 1047 54 7 20 chr13 17474016 17474167 -102810145 + L1Md_F2 LINE L1 6432 6580 -2 6 718 337 307 113 7 chr13 17474517 17474658 -102809654 + HAL1-3A_ME LINE L1 2284 2439 -419 6 718 209 338 157 13 chr13 17475099 17475252 -102809060 + MIR SINE MIR 84 258 -4 6 718 709 187 0 23 chr13 17475321 17475393 -102808919 + polypurine Low_complexity Low_complexity 4 72 0 6 718 1052 106 0 22 chr13 17475393 17475576 -102808736 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 6 718 709 187 0 23 chr13 17475576 17475678 -102808634 + polypurine Low_complexity Low_complexity 73 174 0 6 718 275 150 179 45 chr13 17476366 17476478 -102807834 - Lx9 LINE L1 -1 7643 7517 6 718 186 103 0 0 chr13 17476478 17476507 -102807805 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 718 582 293 100 17 chr13 17476682 17476889 -102807423 + MTD LTR MaLR 9 231 -188 6 718 266 270 227 13 chr13 17477248 17477323 -102806989 + B1F1 SINE Alu 3 93 -56 6 718 230 180 33 0 chr13 17477556 17477617 -102806695 + L1MC LINE L1 4134 4196 -1950 6 718 1780 146 0 3 chr13 17477947 17478242 -102806070 - L1_Mur2 LINE L1 -1411 4466 4173 6 718 2517 34 6 47 chr13 17479166 17479510 -102804802 - L1Md_F3 LINE L1 -12 6572 6243 6 718 5404 30 0 0 chr13 17479510 17480226 -102804086 + L1Md_T LINE L1 5506 6221 -361 6 718 324 353 63 41 chr13 17480737 17481006 -102803306 - L2c LINE L2 -58 3329 3055 6 718 183 399 151 17 chr13 17482163 17482395 -102801917 + L4 LINE RTE 1058 1320 -709 6 718 851 242 72 0 chr13 17482585 17482779 -102801533 + B3 SINE B2 3 210 -6 6 718 28 0 0 0 chr13 17482796 17482824 -102801488 + AT_rich Low_complexity Low_complexity 1 28 0 6 718 207 0 0 0 chr13 17482970 17482993 -102801319 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 718 274 128 0 0 chr13 17482996 17483043 -102801269 + MER58B DNA MER1_type 138 184 -157 6 718 1061 261 49 18 chr13 17483047 17483437 -102800875 + L1MA8 LINE L1 5708 6109 -182 6 718 320 182 0 57 chr13 17483843 17483913 -102800399 + L1VL4 LINE L1 519 584 -5718 6 718 6910 170 57 5 chr13 17483884 17485165 -102799147 + Lx3C LINE L1 5644 6972 -4 6 718 27 0 0 0 chr13 17485358 17485385 -102798927 + AT_rich Low_complexity Low_complexity 1 27 0 6 718 205 329 119 31 chr13 17485515 17485675 -102798637 - MER5B DNA MER1_type -1 177 4 6 718 2391 274 105 19 chr13 17486250 17487371 -102796941 + L1_Mur3 LINE L1 2108 3325 -2555 6 718 538 210 70 59 chr13 17487390 17487577 -102796735 + Lx7 LINE L1 7372 7560 -136 6 718 455 265 225 18 chr13 17487595 17487822 -102796490 - Lx9 LINE L1 -203 7441 7168 6 718 978 240 173 21 chr13 17487835 17488269 -102796043 + L1_Mur3 LINE L1 3480 3979 -1901 6 718 343 226 50 50 chr13 17488336 17488457 -102795855 - L1M2 LINE L1 -1483 4660 4540 6 718 2568 283 96 25 chr13 17488457 17489857 -102794455 - L1_Mur3 LINE L1 -1327 4553 3055 6 718 21670 159 65 6 chr13 17489871 17495649 -102788663 - L1Md_F2 LINE L1 -14 6568 446 6 718 1015 261 88 8 chr13 17495649 17496000 -102788312 - L1_Rod LINE L1 -3352 2495 2117 6 718 4407 188 41 10 chr13 17496002 17496971 -102787341 + Lx4B LINE L1 5939 7041 -17 6 718 379 219 52 4 chr13 17497018 17497132 -102787180 - Lx4B LINE L1 -8 7050 6877 6 718 2559 258 64 7 chr13 17497149 17498260 -102786052 - L1_Rod LINE L1 -3772 2075 900 6 718 4949 216 42 7 chr13 17498411 17499402 -102784910 - Lx6 LINE L1 -4 7456 6431 6 718 2450 81 44 2 chr13 17499381 17500000 -102784312 + L1VL4 LINE L1 607 1241 -2318 6 718 7484 75 32 8 chr13 17500000 17501078 -102783234 + MusHAL1 LINE L1 395 1498 -1214 1 718 26 0 0 0 chr13 17501089 17501115 -102783197 + AT_rich Low_complexity Low_complexity 1 26 0 2 718 3861 181 12 21 chr13 17501115 17501752 -102782560 + Lx6 LINE L1 5236 5872 -1588 3 718 2665 171 82 4 chr13 17501752 17501922 -102782390 + RLTR11A2 LTR ERVK 3 175 -352 4 718 396 0 0 0 chr13 17501922 17501966 -102782346 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 718 2665 171 82 4 chr13 17501966 17502282 -102782030 + RLTR11A2 LTR ERVK 176 526 -1 4 718 3861 234 19 19 chr13 17502282 17502826 -102781486 + Lx6 LINE L1 5873 6420 -1040 3 718 2006 135 0 30 chr13 17502834 17503162 -102781150 - ORR1A4 LTR MaLR -8 321 4 6 718 2634 114 44 3 chr13 17503182 17503568 -102780744 - L1VL4 LINE L1 -5679 623 222 7 718 2698 200 47 91 chr13 17503593 17504315 -102779997 - L1_Mur3 LINE L1 -690 5190 4501 8 718 438 307 58 0 chr13 17504744 17504881 -102779431 - B1F SINE Alu -4 145 1 9 718 304 250 62 0 chr13 17505553 17505633 -102778679 + MIRm SINE MIR 75 159 -117 1 718 962 200 71 9 chr13 17505640 17505852 -102778460 + Lx3C LINE L1 6748 6972 -4 1 718 292 290 145 0 chr13 17506200 17506331 -102777981 + MER105 DNA DNA 20 169 -35 1 718 261 0 0 0 chr13 17506555 17506584 -102777728 + (T)n Simple_repeat Simple_repeat 1 29 0 1 718 45 34 0 0 chr13 17507724 17507783 -102776529 + AT_rich Low_complexity Low_complexity 1 59 0 1 718 215 220 0 33 chr13 17508064 17508123 -102776189 - PB1 SINE Alu -12 115 56 1 718 3307 104 2 32 chr13 17508164 17508662 -102775650 + RLTR1C LTR ERV1 1 483 -20 1 718 10193 152 92 10 chr13 17509205 17510448 -102773864 + L1_Mur2 LINE L1 2164 3470 -2407 1 718 228 86 0 0 chr13 17510448 17510483 -102773829 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 718 10193 152 92 10 chr13 17510483 17511249 -102773063 + L1_Mur2 LINE L1 3471 4336 -1541 1 718 301 252 76 30 chr13 17511270 17511401 -102772911 + Lx5 LINE L1 6914 7050 0 1 718 1806 299 76 43 chr13 17513665 17514430 -102769882 + Cheshire DNA MER1_type 18 807 -1613 2 718 333 0 0 0 chr13 17514430 17514467 -102769845 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 718 226 215 104 30 chr13 17514546 17514613 -102769699 + ID4 SINE ID 2 73 -10 2 718 218 333 0 104 chr13 17514664 17514741 -102769571 - PB1D10 SINE Alu -28 89 21 2 718 3484 216 42 9 chr13 17514837 17515581 -102768731 + Lx5 LINE L1 5719 6486 -564 2 718 200 179 161 0 chr13 17515581 17515637 -102768675 - MER5A DNA MER1_type -120 69 5 2 718 256 383 31 15 chr13 17515660 17515790 -102768522 + MER5B DNA MER1_type 46 177 -1 2 718 1296 246 54 65 chr13 17516200 17516722 -102767590 + L1M2 LINE L1 4404 4919 -1224 2 718 419 261 121 6 chr13 17516845 17517011 -102767301 + L1MB7 LINE L1 5998 6182 -2 2 718 784 291 67 15 chr13 17517182 17517510 -102766802 - MLT1-int LTR MaLR -803 568 224 2 718 842 251 52 35 chr13 17517513 17517744 -102766568 - RMER1C Other Other -579 763 529 3 718 245 282 127 51 chr13 17517807 17517964 -102766348 + Lx8 LINE L1 7283 7451 -22 3 718 1076 318 150 36 chr13 17518579 17519954 -102764358 - CR1_Mam LINE CR1 -477 1727 197 3 718 1866 98 14 3 chr13 17520568 17520855 -102763457 - L1_Mus3 LINE L1 -2 6636 6347 3 718 719 85 0 58 chr13 17521565 17521703 -102762609 + L1Md_F2 LINE L1 6452 6581 -1 3 718 2417 56 28 0 chr13 17522177 17522499 -102761813 + L1_Mus2 LINE L1 6236 6566 0 3 718 236 360 13 0 chr13 17524861 17524936 -102759376 - ID4_ SINE ID -4 79 4 3 718 1683 208 110 3 chr13 17525239 17525611 -102758701 - Lx5 LINE L1 -7 7043 6632 3 718 3429 150 81 6 chr13 17525610 17526462 -102757850 + Lx5 LINE L1 5684 6599 -451 3 718 226 200 0 143 chr13 17526879 17526949 -102757363 + RMER21A LTR ERV1 200 259 -688 3 718 274 301 86 114 chr13 17527307 17527517 -102756795 + MIR SINE MIR 44 247 -15 3 718 933 321 55 7 chr13 17528443 17528735 -102755577 - ORR1E LTR MaLR -53 306 1 4 718 583 254 69 42 chr13 17529172 17529361 -102754951 - B3A SINE B2 -3 195 2 4 718 816 189 7 7 chr13 17530384 17530533 -102753779 - B1_Mur4 SINE Alu -1 149 1 4 718 305 273 8 40 chr13 17531480 17531606 -102752706 - BC1_Mm scRNA scRNA -17 135 14 4 718 230 367 133 0 chr13 17532241 17532331 -102751981 + PB1 SINE Alu 1 102 -25 4 718 182 191 21 0 chr13 17532346 17532393 -102751919 + GA-rich Low_complexity Low_complexity 3 50 0 4 718 988 0 0 0 chr13 17532623 17532730 -102751582 + U6 snRNA snRNA 1 107 0 4 718 36563 6 0 0 chr13 17532730 17536906 -102747406 + L1Md_A LINE L1 1411 5586 -297 4 718 9046 1 0 0 chr13 17536906 17537902 -102746410 + L1Md_A LINE L1 5587 6582 0 4 718 617 276 60 43 chr13 17538148 17538522 -102745790 + Lx9 LINE L1 5699 6073 -935 4 718 1862 302 90 31 chr13 17538566 17539422 -102744890 - Lx7 LINE L1 -589 7107 6170 4 718 342 0 0 0 chr13 17539422 17539460 -102744852 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 718 1856 283 46 13 chr13 17539460 17539753 -102744559 - Lx7 LINE L1 -1304 6169 5777 4 718 242 330 29 0 chr13 17539777 17539880 -102744432 + PB1D10 SINE Alu 5 110 -7 5 718 21 0 0 0 chr13 17540081 17540102 -102744210 + AT_rich Low_complexity Low_complexity 1 21 0 5 718 1410 55 0 0 chr13 17540481 17540862 -102743450 + (GAA)n Simple_repeat Simple_repeat 1 381 0 5 718 3543 147 46 97 chr13 17541009 17541558 -102742754 - L1VL4 LINE L1 -1926 1633 1129 5 718 1156 62 7 0 chr13 17541558 17541704 -102742608 - B1_Mm SINE Alu 0 147 1 5 718 3543 132 23 37 chr13 17541704 17542063 -102742249 - L1VL4 LINE L1 -2431 1128 767 5 718 5303 192 83 19 chr13 17542056 17543202 -102741110 + Lx2B LINE L1 5745 6963 -37 5 718 379 76 15 15 chr13 17543895 17543925 -102740387 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 718 879 37 0 0 chr13 17543925 17544032 -102740280 + (GAA)n Simple_repeat Simple_repeat 1 107 0 5 718 379 76 15 15 chr13 17544032 17544068 -102740244 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 718 454 302 27 61 chr13 17545116 17545264 -102739048 - B1F SINE Alu -2 147 5 6 718 181 366 51 29 chr13 17545940 17546078 -102738234 + MIRc SINE MIR 14 154 -114 6 718 197 163 20 0 chr13 17546757 17546806 -102737506 + GA-rich Low_complexity Low_complexity 4 53 0 6 718 331 154 30 15 chr13 17546806 17546872 -102737440 - B1_Mur2 SINE Alu -32 117 51 6 718 180 244 115 58 chr13 17548095 17548182 -102736130 - MER5A DNA MER1_type -1 188 97 6 718 3084 61 10 0 chr13 17548257 17548653 -102735659 + MTB LTR MaLR 1 400 0 6 718 360 195 0 44 chr13 17548666 17548681 -102735631 + L1MEg LINE L1 1862 1876 -4208 6 718 1172 74 0 0 chr13 17548681 17548829 -102735483 + B1_Mus1 SINE Alu 1 148 0 6 718 360 195 0 44 chr13 17548829 17548904 -102735408 + L1MEg LINE L1 1877 1948 -4136 6 718 240 347 0 13 chr13 17548923 17548999 -102735313 - MIR SINE MIR -120 142 68 6 718 650 285 66 22 chr13 17549419 17549645 -102734667 - RMER5 LTR ERV1 -250 284 49 6 718 691 176 0 8 chr13 17549645 17549777 -102734535 - L1_Mur2 LINE L1 -1476 4401 4271 7 718 279 0 0 0 chr13 17549777 17549808 -102734504 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 718 872 188 79 36 chr13 17549809 17550161 -102734151 - RLTR13D6 LTR ERVK -118 784 277 7 718 1035 120 12 0 chr13 17550190 17550357 -102733955 - L1_Mur2 LINE L1 -1597 4280 4112 7 718 5618 117 55 4 chr13 17550359 17551262 -102733050 + ORR1A2-int LTR MaLR 1043 1963 0 7 718 490 123 0 0 chr13 17551262 17551335 -102732977 + ORR1A2 LTR MaLR 1 73 -254 7 718 380 243 2 18 chr13 17551467 17551643 -102732669 + Lx9 LINE L1 3020 3187 -2660 7 718 6697 98 2 0 chr13 17551640 17552560 -102731752 + L1Md_F2 LINE L1 315 1236 -5380 7 718 12285 61 0 0 chr13 17555335 17556906 -102727406 + L1Md_F2 LINE L1 4016 5586 -297 7 718 8348 31 0 19 chr13 17556906 17557918 -102726394 + L1Md_F2 LINE L1 5587 6579 -3 7 718 27 0 0 0 chr13 17557918 17557945 -102726367 + AT_rich Low_complexity Low_complexity 1 27 0 7 718 6826 249 76 42 chr13 17558013 17559359 -102724953 + Lx9 LINE L1 3192 4555 -1292 7 718 1159 75 0 0 chr13 17559359 17559505 -102724807 - B1_Mm SINE Alu 0 147 2 7 718 6826 250 76 42 chr13 17559505 17560921 -102723391 + Lx9 LINE L1 4556 6089 -1555 7 718 1602 274 64 21 chr13 17561015 17561529 -102722783 + Lx9 LINE L1 6251 6786 -858 7 718 224 91 0 22 chr13 17561529 17561574 -102722738 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 7 718 8458 94 82 9 chr13 17561646 17563110 -102721202 - Lx3_Mus LINE L1 -9 7000 5447 7 89 13484 89 42 5 chr13 17563100 17565140 -102719172 - Lx3_Mus LINE L1 -1306 4580 2466 7 719 3666 41 0 0 chr13 17565140 17565580 -102718732 - L1Md_A LINE L1 0 6582 6143 8 719 3354 75 0 0 chr13 17565574 17566012 -102718300 + L1Md_T LINE L1 6145 6582 0 8 719 38533 42 1 15 chr13 17566012 17571690 -102712622 - L1Md_A LINE L1 -429 6153 559 8 719 8480 102 63 2 chr13 17571690 17573492 -102710820 - Lx3_Mus LINE L1 -3410 2476 208 7 719 1966 289 84 6 chr13 17573490 17574144 -102710168 + Lx9 LINE L1 6769 7473 -171 7 719 204 288 0 48 chr13 17574199 17574261 -102710051 + polypurine Low_complexity Low_complexity 2 60 0 8 719 24 0 0 0 chr13 17574270 17574294 -102710018 + AT_rich Low_complexity Low_complexity 1 24 0 8 719 30 45 0 0 chr13 17574321 17574365 -102709947 + AT_rich Low_complexity Low_complexity 1 44 0 8 719 277 280 43 96 chr13 17574525 17574647 -102709665 - B1F SINE Alu 0 127 1 8 719 351 313 88 24 chr13 17574776 17574946 -102709366 - RMER15 LTR ERVL -43 532 352 8 719 465 19 0 0 chr13 17574967 17575021 -102709291 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 719 534 299 43 53 chr13 17575362 17575570 -102708742 - MIR SINE MIR -31 231 26 8 719 206 350 95 0 chr13 17576510 17576605 -102707707 - L2c LINE L2 -256 3131 3025 8 719 7701 169 40 8 chr13 17576734 17577284 -102707028 + Lx4B LINE L1 5589 6165 -893 9 719 2449 144 47 69 chr13 17577284 17577822 -102706490 + RLTR11A2 LTR ERVK 2 527 0 9 719 7701 169 40 8 chr13 17577822 17578690 -102705622 + Lx4B LINE L1 6166 7051 -7 9 719 1990 240 65 73 chr13 17579844 17580443 -102703869 - RMER19B LTR ERVK 0 902 309 9 719 201 39 0 0 chr13 17580533 17580559 -102703753 + (TTG)n Simple_repeat Simple_repeat 2 27 0 9 719 1205 34 7 0 chr13 17580581 17580727 -102703585 - B1_Mus2 SINE Alu 0 147 1 9 719 2619 177 137 10 chr13 17581382 17581878 -102702434 - Lx5 LINE L1 -3 7047 6489 9 719 6164 131 67 6 chr13 17581879 17583386 -102700926 + Lx5 LINE L1 4864 6466 -584 9 719 220 312 16 0 chr13 17583660 17583724 -102700588 + PB1 SINE Alu 43 107 -20 9 719 739 303 29 40 chr13 17583713 17584038 -102700274 + MLT1E1 LTR MaLR 353 678 -2 9 719 678 194 73 0 chr13 17584531 17584655 -102699657 + B1_Mus2 SINE Alu 15 147 0 9 719 1600 87 24 12 chr13 17585164 17585410 -102698902 - L1_Mus1 LINE L1 0 6567 6319 9 719 208 292 41 14 chr13 17585441 17585514 -102698798 - L2b LINE L2 -5 3370 3296 1 719 232 374 94 26 chr13 17586931 17587123 -102697189 + MER63A DNA AcHobo 4 208 -2 1 719 335 318 51 101 chr13 17587123 17587283 -102697029 + MER102a DNA MER1_type 182 330 0 1 719 366 23 0 0 chr13 17587529 17587572 -102696740 + (TATG)n Simple_repeat Simple_repeat 1 43 0 1 719 378 0 0 0 chr13 17588051 17588093 -102696219 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 719 21 36 0 0 chr13 17588701 17588729 -102695583 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 234 366 0 27 chr13 17588774 17588920 -102695392 + GA-rich Low_complexity Low_complexity 3 144 0 1 719 198 0 0 0 chr13 17589282 17589304 -102695008 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 1 719 692 218 35 0 chr13 17589340 17589482 -102694830 - B1_Mus1 SINE Alu 0 148 2 1 719 198 265 0 0 chr13 17589610 17589678 -102694634 + GA-rich Low_complexity Low_complexity 4 71 0 1 719 2642 134 13 42 chr13 17589910 17590383 -102693929 - L1VL4 LINE L1 -5450 852 402 1 719 278 239 0 78 chr13 17590386 17590463 -102693849 - PB1D9 SINE Alu -1 119 49 1 719 8857 165 24 89 chr13 17590463 17590983 -102693329 + Lx6 LINE L1 3910 4422 -3038 1 719 954 125 0 0 chr13 17590983 17591119 -102693193 + B1_Mus1 SINE Alu 8 143 -5 1 719 8857 165 24 89 chr13 17591119 17592674 -102691638 + Lx6 LINE L1 4423 5960 -1500 1 719 2174 249 134 23 chr13 17592666 17593329 -102690983 + Lx6 LINE L1 6588 7324 -136 1 719 30849 113 19 8 chr13 17593343 17599650 -102684662 - L1_Mus1 LINE L1 0 6567 186 1 719 733 203 0 0 chr13 17599650 17599793 -102684519 + Lx6 LINE L1 7313 7455 -5 1 719 542 229 92 0 chr13 17599854 17599985 -102684327 + B1F SINE Alu 3 145 -4 1 719 248 160 48 39 chr13 17600274 17600378 -102683934 + (TATAA)n Simple_repeat Simple_repeat 3 107 0 1 719 222 294 23 34 chr13 17600708 17600796 -102683516 - MIR SINE MIR -64 198 112 1 719 303 330 0 9 chr13 17600951 17601064 -102683248 + (CATATA)n Simple_repeat Simple_repeat 1 112 0 1 719 21 57 0 0 chr13 17601108 17601143 -102683169 + AT_rich Low_complexity Low_complexity 1 35 0 1 719 482 227 164 0 chr13 17601780 17601908 -102682404 + ID_B1 SINE B4 5 153 -71 1 719 277 182 14 96 chr13 17601858 17601931 -102682381 + PB1D10 SINE Alu 23 89 -28 1 719 216 0 0 0 chr13 17601943 17601967 -102682345 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 719 3230 159 34 2 chr13 17602097 17602665 -102681647 + Lx LINE L1 6068 6653 -1 1 719 342 344 96 0 chr13 17603506 17603663 -102680649 + MER5B DNA MER1_type 7 178 0 1 719 1117 318 69 64 chr13 17604458 17605351 -102678961 - L1_Mur3 LINE L1 -9 5871 4953 1 719 261 0 0 0 chr13 17605351 17605380 -102678932 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 719 1117 318 69 64 chr13 17605380 17605409 -102678903 - L1_Mur3 LINE L1 -928 4952 4931 1 719 2142 25 94 4 chr13 17605409 17605685 -102678627 + L1Md_F3 LINE L1 6284 6584 0 1 719 1117 318 69 64 chr13 17605685 17605845 -102678467 - L1_Mur3 LINE L1 -950 4930 4783 1 719 285 98 0 0 chr13 17605969 17606010 -102678302 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 719 503 303 14 83 chr13 17606210 17606426 -102677886 - Lx9 LINE L1 -453 7191 6991 1 719 2403 308 92 23 chr13 17606707 17608417 -102675895 - L1_Rod LINE L1 -2726 3121 1295 1 719 1385 59 21 5 chr13 17608814 17609000 -102675312 + B2_Mm2 SINE B2 2 190 -5 1 719 702 185 76 90 chr13 17609540 17609717 -102674595 + B3 SINE B2 28 216 0 1 719 4479 176 16 10 chr13 17609735 17610523 -102673789 + Lx5 LINE L1 6252 7044 -6 1 719 28 0 0 0 chr13 17610527 17610555 -102673757 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 832 338 61 10 chr13 17611088 17611500 -102672812 + Charlie13a DNA Charlie 615 1047 -467 1 719 1366 43 0 117 chr13 17611515 17611561 -102672751 - L1_Mus2 LINE L1 0 6566 6522 1 719 1246 214 64 18 chr13 17611561 17611904 -102672408 + RLTR10D LTR ERVK 1 359 0 1 719 1380 43 0 117 chr13 17611904 17612070 -102672242 - L1_Mus2 LINE L1 -45 6521 6379 1 719 713 296 40 22 chr13 17612379 17612607 -102671705 - MLT1D LTR MaLR -3 502 271 1 719 233 216 110 98 chr13 17612884 17612966 -102671346 + MLT1B LTR MaLR 4 86 -304 1 719 453 250 93 67 chr13 17612962 17613112 -102671200 + RSINE1 SINE B4 12 165 0 1 719 819 216 132 24 chr13 17613281 17613532 -102670780 + RMER20B LTR ERVK 132 409 -218 1 719 273 119 0 0 chr13 17613648 17613690 -102670622 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 719 626 274 71 51 chr13 17613709 17613905 -102670407 + B3A SINE B2 10 209 -7 1 719 422 300 47 17 chr13 17614197 17614495 -102669817 + L1M4 LINE L1 2623 2929 -3217 1 719 225 154 152 13 chr13 17614757 17614836 -102669476 + L1M4 LINE L1 3139 3228 -2912 1 719 3257 209 56 82 chr13 17614850 17615309 -102669003 + RMER19B LTR ERVK 1 416 -486 1 719 5135 122 9 23 chr13 17615309 17616126 -102668186 + Lx2 LINE L1 6192 6996 -1 1 719 3257 209 56 82 chr13 17616126 17616469 -102667843 + RMER19B LTR ERVK 417 782 -120 1 719 10821 145 10 213 chr13 17616506 17616661 -102667651 + L1Md_F3 LINE L1 2812 2973 -2904 1 719 4905 108 12 19 chr13 17616661 17617405 -102666907 + Lx LINE L1 5912 6650 -4 1 719 14319 87 5 96 chr13 17617405 17618424 -102665888 + L1Md_F3 LINE L1 2974 3809 -2074 1 719 695 184 73 0 chr13 17618424 17618560 -102665752 + RMER19B LTR ERVK 757 902 0 1 719 14319 87 5 96 chr13 17618560 17620723 -102663589 + L1Md_F3 LINE L1 3810 5586 -297 1 719 8419 30 1 3 chr13 17620723 17621723 -102662589 + L1Md_F3 LINE L1 5587 6584 0 1 719 231 208 0 94 chr13 17621810 17621895 -102662417 + Arthur1C DNA Tip100 280 356 -7 1 719 210 224 0 0 chr13 17622850 17622899 -102661413 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 1 719 274 152 77 0 chr13 17623190 17623260 -102661052 - L1M2 LINE L1 -852 5451 5375 1 719 3892 172 96 18 chr13 17623269 17624109 -102660203 + RMER13B LTR ERVK 1 906 -2 1 719 355 251 61 41 chr13 17624109 17624309 -102660003 - L1M2 LINE L1 -813 5330 5127 1 719 216 0 0 0 chr13 17624309 17624333 -102659979 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 719 274 298 58 66 chr13 17624333 17624391 -102659921 - L1M2 LINE L1 -1014 5126 5071 1 719 285 298 9 9 chr13 17624532 17624647 -102659665 - L1M2 LINE L1 -1126 5017 4903 1 719 412 324 0 0 chr13 17624689 17624797 -102659515 - B1F SINE Alu -9 140 33 1 719 643 266 30 17 chr13 17624797 17625027 -102659285 - L1M2 LINE L1 -1234 4909 4677 1 719 841 251 71 41 chr13 17625028 17625066 -102659246 + L1M2 LINE L1 3858 3894 -2249 1 719 398 134 0 47 chr13 17625066 17625152 -102659160 + L1Md_F2 LINE L1 6497 6578 -4 1 719 841 255 83 44 chr13 17625152 17625567 -102658745 + L1M2 LINE L1 3892 4357 -1783 1 719 3044 76 16 2 chr13 17625567 17626001 -102658311 + Lx2A LINE L1 6567 7006 -2 1 719 654 268 126 56 chr13 17626001 17626193 -102658119 + L1M2 LINE L1 4358 4546 -1594 1 719 304 227 265 0 chr13 17626180 17626312 -102658000 + L1M2 LINE L1 4464 4630 -1513 1 719 688 247 206 17 chr13 17626583 17626879 -102657433 + Lx9 LINE L1 6930 7281 -363 1 719 417 39 0 0 chr13 17626985 17627036 -102657276 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 719 22 0 0 0 chr13 17627193 17627215 -102657097 + AT_rich Low_complexity Low_complexity 1 22 0 1 719 313 262 183 13 chr13 17627561 17627785 -102656527 + ORSL DNA Tip100 14 275 0 1 719 380 257 54 18 chr13 17627893 17628004 -102656308 + L1MB7 LINE L1 6070 6184 0 1 719 2530 78 63 66 chr13 17628987 17629398 -102654914 - L1_Mus4 LINE L1 -5 6631 6222 1 719 39 0 0 0 chr13 17629487 17629526 -102654786 + AT_rich Low_complexity Low_complexity 1 39 0 1 719 182 257 28 28 chr13 17629614 17629686 -102654626 - MIRc SINE MIR -21 247 176 1 719 431 245 34 7 chr13 17629940 17630088 -102654224 + L1M2 LINE L1 4807 4958 -1185 1 719 26282 109 14 100 chr13 17630083 17635324 -102648988 + L1_Mus1 LINE L1 382 5132 -751 1 719 1395 108 0 0 chr13 17635324 17635528 -102648784 + L1_Mus1 LINE L1 6364 6567 0 1 719 26282 82 12 40 chr13 17635528 17636987 -102647325 + L1_Mus1 LINE L1 5133 6554 -13 1 719 601 231 103 197 chr13 17636989 17637371 -102646941 + RMER4B LTR ERVK 119 576 -9 1 719 1415 278 53 24 chr13 17637394 17637862 -102646450 + Lx9 LINE L1 6432 6913 -731 1 719 1582 232 60 35 chr13 17637871 17638268 -102646044 - MTD LTR MaLR -12 407 1 1 719 548 200 54 0 chr13 17638268 17638398 -102645914 + Lx9 LINE L1 6911 7047 -597 1 719 1006 256 4 22 chr13 17638428 17638696 -102645616 + Lx9 LINE L1 6401 6663 -981 1 719 1547 241 18 15 chr13 17638741 17639078 -102645234 + MTD LTR MaLR 18 355 -64 1 719 926 308 91 65 chr13 17639078 17639648 -102644664 + Lx9 LINE L1 6825 7409 -235 1 719 186 208 0 0 chr13 17639786 17639834 -102644478 + GA-rich Low_complexity Low_complexity 2 49 0 1 719 548 238 86 11 chr13 17639889 17640063 -102644249 + Lx9 LINE L1 5862 6048 -1596 1 719 23 0 0 0 chr13 17640182 17640205 -102644107 + AT_rich Low_complexity Low_complexity 1 23 0 1 719 288 0 0 0 chr13 17640224 17640256 -102644056 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 719 1164 236 9 43 chr13 17640271 17640338 -102643974 + Lx9 LINE L1 6678 6746 -898 1 719 746 248 157 28 chr13 17640338 17640662 -102643650 + ORR1D2 LTR MaLR 1 366 -4 1 719 1164 236 9 43 chr13 17640662 17640917 -102643395 + Lx9 LINE L1 6747 6989 -655 1 719 974 282 66 5 chr13 17640917 17641158 -102643154 - ORR1E LTR MaLR -95 284 4 1 719 2321 259 71 28 chr13 17641158 17641788 -102642524 - ORR1E-int LTR MaLR -50 1530 873 1 719 747 189 50 84 chr13 17641823 17642025 -102642287 + B2_Mm2 SINE B2 1 195 0 1 719 2322 250 146 29 chr13 17642384 17643157 -102641155 - ORR1E-int LTR MaLR -715 865 2 1 719 799 298 36 96 chr13 17643165 17643499 -102640813 - ORR1E LTR MaLR -5 354 41 1 719 219 114 0 0 chr13 17643723 17643758 -102640554 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 719 902 242 47 30 chr13 17643824 17644058 -102640254 + Lx6 LINE L1 7197 7434 -26 1 719 1125 94 0 0 chr13 17644064 17644224 -102640088 + (GGAA)n Simple_repeat Simple_repeat 2 161 0 1 719 319 347 113 46 chr13 17644436 17644587 -102639725 - MER45A DNA Tip100 -9 169 9 1 719 584 310 81 8 chr13 17645207 17645441 -102638871 + Charlie4a DNA MER1_type 10 260 -248 1 719 262 382 62 7 chr13 17645426 17645571 -102638741 + ID_B1 SINE B4 69 221 -3 1 719 502 287 45 15 chr13 17645641 17645839 -102638473 + Charlie4a DNA MER1_type 299 502 -6 1 719 30 0 0 0 chr13 17645982 17646012 -102638300 + AT_rich Low_complexity Low_complexity 1 30 0 1 719 293 222 110 12 chr13 17646712 17646794 -102637518 + LTR80B LTR ERVL 67 156 -428 1 719 22 53 0 35 chr13 17646865 17646881 -102637431 + AT_rich Low_complexity Low_complexity 1 15 0 1 719 1203 61 0 0 chr13 17646881 17647028 -102637284 + B1_Mm SINE Alu 1 147 0 1 719 22 53 0 35 chr13 17647028 17647069 -102637243 + AT_rich Low_complexity Low_complexity 1 41 0 1 719 21 36 0 0 chr13 17647193 17647221 -102637091 + AT_rich Low_complexity Low_complexity 1 28 0 1 719 228 247 0 38 chr13 17647268 17647348 -102636964 + L1VL2 LINE L1 121 197 -6138 1 719 2750 164 10 2 chr13 17647453 17647849 -102636463 + L1Md_F LINE L1 684 1083 -5533 1 719 7588 45 1 13 chr13 17647849 17648802 -102635510 + L1Md_F2 LINE L1 5641 6582 0 1 719 3664 97 41 44 chr13 17648802 17649608 -102634704 + L1Md_F LINE L1 1083 1846 -4037 1 719 1765 277 80 21 chr13 17649612 17649920 -102634392 + L1_Mur3 LINE L1 2233 2544 -3336 1 719 2280 124 3 0 chr13 17649920 17650242 -102634070 - ORR1A2 LTR MaLR 0 327 5 1 719 1765 277 80 21 chr13 17650242 17650864 -102633448 + L1_Mur3 LINE L1 2545 3217 -2663 1 719 1614 26 0 20 chr13 17650901 17651097 -102633215 + B2_Mm1t SINE B2 1 192 -1 1 719 195 139 0 0 chr13 17651105 17651141 -102633171 + (A)n Simple_repeat Simple_repeat 1 36 0 2 719 266 288 8 8 chr13 17651143 17651269 -102633043 + L1_Mur3 LINE L1 3246 3371 -2509 1 719 265 185 19 0 chr13 17651278 17651332 -102632980 - RMER1C Other Other -524 818 764 2 719 405 0 0 0 chr13 17651340 17651385 -102632927 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 719 1785 284 116 22 chr13 17651404 17652122 -102632190 - Lx9 LINE L1 -354 7290 6506 2 719 1744 101 0 8 chr13 17652428 17652687 -102631625 + Lx3A LINE L1 6587 6843 -138 2 719 338 182 57 16 chr13 17653069 17653171 -102631141 + Lx3A LINE L1 6850 6951 -30 2 719 5255 105 70 10 chr13 17653171 17653985 -102630327 + Lx LINE L1 5786 6648 -6 2 719 338 206 35 67 chr13 17653985 17654036 -102630276 + Lx3A LINE L1 6952 7009 0 2 719 689 245 84 4 chr13 17654086 17654336 -102629976 + Lx9 LINE L1 7321 7590 -54 2 719 1925 216 47 122 chr13 17654444 17654683 -102629629 + Lx9 LINE L1 5085 5248 -599 2 719 822 73 0 0 chr13 17654683 17654793 -102629519 + (GAGAA)n Simple_repeat Simple_repeat 3 112 0 2 719 1925 216 47 122 chr13 17654793 17655334 -102628978 + Lx9 LINE L1 5249 5807 -40 2 719 33285 49 16 8 chr13 17655332 17660578 -102623734 + L1Md_F2 LINE L1 295 5586 -297 2 719 8099 46 1 2 chr13 17660578 17661573 -102622739 + L1Md_F2 LINE L1 5587 6580 -2 2 719 365 290 54 14 chr13 17661580 17661727 -102622585 + Lx9 LINE L1 5830 5982 -1662 2 719 429 20 0 0 chr13 17661900 17661950 -102622362 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 719 235 339 100 29 chr13 17662458 17662628 -102621684 + Tigger11a DNA MER2_type 417 598 -137 2 719 17738 159 23 11 chr13 17663515 17667267 -102617045 + L1_Mur1 LINE L1 1004 4799 -1087 2 719 1091 100 0 0 chr13 17667267 17667407 -102616905 + B1_Mus1 SINE Alu 2 141 -7 2 719 800 128 0 8 chr13 17667414 17667548 -102616764 + (GAAA)n Simple_repeat Simple_repeat 3 135 0 2 719 2943 137 41 93 chr13 17667575 17668209 -102616103 + L1_Mur1 LINE L1 5236 5836 -50 2 719 4980 186 35 3 chr13 17668211 17669196 -102615116 + Lx3C LINE L1 5957 6972 -4 2 719 458 279 21 21 chr13 17669577 17669720 -102614592 + MER102b DNA MER1_type 24 166 -175 2 719 905 125 44 0 chr13 17669724 17669860 -102614452 + B1_Mus2 SINE Alu 1 142 -5 2 719 436 291 0 26 chr13 17670162 17670275 -102614037 + PB1D10 SINE Alu 6 115 -2 2 719 261 0 0 0 chr13 17670441 17670481 -102613831 - Lx LINE L1 -4 6650 6611 2 719 1351 141 4 32 chr13 17670479 17670728 -102613584 - L1_Mm LINE L1 -465 5418 5177 2 719 292 349 131 31 chr13 17670965 17671255 -102613057 + L2a LINE L2 3094 3412 -14 2 719 33 43 0 0 chr13 17671483 17671530 -102612782 + AT_rich Low_complexity Low_complexity 1 47 0 2 719 314 232 167 29 chr13 17671541 17671643 -102612669 - PB1D10 SINE Alu -1 116 1 2 719 190 418 63 9 chr13 17672561 17672672 -102611640 + MIRb SINE MIR 15 131 -137 2 719 826 176 7 14 chr13 17673001 17673139 -102611173 + B1_Mur2 SINE Alu 1 137 -12 2 719 270 0 0 0 chr13 17673139 17673169 -102611143 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 2 719 237 65 0 0 chr13 17673505 17673536 -102610776 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 2 719 653 156 16 0 chr13 17673537 17673665 -102610647 + CT-rich Low_complexity Low_complexity 4 133 0 2 719 240 365 31 25 chr13 17674412 17674575 -102609737 + L2 LINE L2 2482 2645 -774 2 719 23 54 0 0 chr13 17674671 17674708 -102609604 + AT_rich Low_complexity Low_complexity 1 37 0 2 719 285 295 127 116 chr13 17675240 17675508 -102608804 + B4 SINE B4 1 271 -21 2 719 384 22 0 0 chr13 17675547 17675592 -102608720 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 719 208 98 49 0 chr13 17675949 17675990 -102608322 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 2 719 623 343 5 46 chr13 17675991 17676208 -102608104 - B4A SINE B4 -81 211 4 2 719 334 273 72 137 chr13 17676212 17676547 -102607765 + L1MC5 LINE L1 7103 7415 -546 2 719 219 175 0 0 chr13 17676722 17676779 -102607533 + GA-rich Low_complexity Low_complexity 1 57 0 2 719 387 215 129 0 chr13 17676792 17676885 -102607427 - RSINE1 SINE B4 -16 149 45 2 719 198 307 80 0 chr13 17677223 17677298 -102607014 - MIR3 SINE MIR -41 167 87 2 719 1927 198 166 21 chr13 17677794 17678356 -102605956 + Lx4B LINE L1 6412 7054 -4 2 719 1549 143 196 8 chr13 17678357 17678709 -102605603 + Lx2 LINE L1 6580 6997 0 2 719 7256 58 9 6 chr13 17678825 17680003 -102604309 - L1Md_F2 LINE L1 -9 6573 5391 2 719 2966 60 17 3 chr13 17680606 17681100 -102603212 + L1VL4 LINE L1 545 1045 -2514 2 719 35097 29 5 0 chr13 17681101 17686159 -102598153 + L1Md_T LINE L1 422 5586 -297 2 719 8452 34 0 0 chr13 17686159 17687154 -102597158 + L1Md_T LINE L1 5587 6581 -1 2 719 22192 164 20 11 chr13 17687188 17688208 -102596104 + Lx LINE L1 1386 2427 -3456 2 719 1127 88 0 0 chr13 17688208 17688355 -102595957 + B1_Mus2 SINE Alu 1 147 0 2 719 22192 154 19 10 chr13 17688355 17692531 -102591781 + Lx LINE L1 2428 6629 -25 2 719 180 0 0 0 chr13 17692536 17692556 -102591756 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2 719 862 236 45 0 chr13 17693429 17693628 -102590684 + B3 SINE B2 2 209 -7 2 719 428 169 99 0 chr13 17693809 17693880 -102590432 + B1_Mur3 SINE Alu 8 85 -64 2 719 554 0 15 0 chr13 17693880 17693946 -102590366 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 2 719 1087 68 0 0 chr13 17694063 17694209 -102590103 - L1_Mus2 LINE L1 -277 6289 6144 2 719 1918 81 3 72 chr13 17694209 17694502 -102589810 + L1_Mus2 LINE L1 6294 6566 0 2 89 1002 238 156 26 chr13 17694522 17694829 -102589483 + MTD LTR MaLR 71 417 -2 2 720 210 271 250 54 chr13 17694992 17695140 -102589172 - MIR SINE MIR -24 238 62 2 720 350 292 146 0 chr13 17695366 17695496 -102588816 + RSINE1 SINE B4 9 157 -8 2 720 1601 198 57 21 chr13 17695498 17696073 -102588239 + RMER19A LTR ERVK 3 737 0 2 720 3425 59 11 16 chr13 17697014 17697460 -102586852 - L1_Mus1 LINE L1 -1 6566 6123 2 720 475 59 0 0 chr13 17697463 17697531 -102586781 + L1_Mus1 LINE L1 5576 5649 -918 2 720 804 181 22 0 chr13 17698412 17698550 -102585762 + B1_Mur2 SINE Alu 2 142 -7 2 720 482 338 37 61 chr13 17699206 17699420 -102584892 + MTEb LTR MaLR 1 209 -170 2 720 393 22 0 0 chr13 17699438 17699484 -102584828 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 720 320 173 0 0 chr13 17699484 17699536 -102584776 + B1_Mur2 SINE Alu 86 137 -12 2 720 270 0 0 0 chr13 17699537 17699567 -102584745 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 720 8153 29 3 1 chr13 17700339 17701483 -102582829 - L1Md_F3 LINE L1 0 6584 5439 2 720 229 316 21 0 chr13 17701583 17701678 -102582634 + L1MC4a LINE L1 6897 6993 -889 2 720 1144 273 32 45 chr13 17702375 17702751 -102581561 - MTEa LTR MaLR -6 373 3 2 720 1641 266 186 29 chr13 17702755 17703278 -102581034 - MTEa-int LTR MaLR -2 1578 974 2 720 387 60 0 0 chr13 17703326 17703376 -102580936 + (TTG)n Simple_repeat Simple_repeat 2 51 0 2 720 880 168 0 7 chr13 17703378 17703522 -102580790 - B1_Mur4 SINE Alu -6 144 2 2 720 1423 171 58 11 chr13 17703561 17703821 -102580491 + ORR1B2 LTR MaLR 88 359 -8 2 720 207 162 0 0 chr13 17703912 17703949 -102580363 + GA-rich Low_complexity Low_complexity 2 38 0 2 720 403 340 26 39 chr13 17704474 17704627 -102579685 + ID_B1 SINE B4 50 200 -24 2 720 622 237 0 0 chr13 17704522 17704636 -102579676 + B1_Mus2 SINE Alu 16 129 -18 2 720 295 165 24 0 chr13 17704646 17704731 -102579581 + GA-rich Low_complexity Low_complexity 1 87 0 2 720 428 204 96 11 chr13 17704731 17704825 -102579487 - RLTR40 LTR ERVK -65 752 651 2 720 2907 144 49 13 chr13 17705316 17705850 -102578462 - RMER6A LTR ERVK 0 756 204 2 720 321 182 61 0 chr13 17705847 17705913 -102578399 - RMER6A LTR ERVK -391 70 1 2 720 1396 139 59 13 chr13 17705913 17706154 -102578158 - ORR1A4 LTR MaLR -43 316 5 2 720 378 57 0 0 chr13 17706154 17706207 -102578105 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 720 347 197 15 0 chr13 17706388 17706454 -102577858 - B1_Mur2 SINE Alu -56 93 27 2 720 243 275 231 22 chr13 17706685 17706867 -102577445 + L2c LINE L2 3168 3387 0 2 720 221 318 121 7 chr13 17707245 17707394 -102576918 - MIRc SINE MIR -50 218 53 2 720 220 287 122 22 chr13 17707528 17707667 -102576645 - MIRc SINE MIR -35 233 81 2 720 492 321 13 6 chr13 17708181 17708338 -102575974 - MER58A DNA MER1_type -43 181 24 2 720 662 186 7 0 chr13 17708909 17709049 -102575263 + (TA)n Simple_repeat Simple_repeat 2 142 0 2 720 833 319 43 41 chr13 17709079 17709494 -102574818 + Lx9 LINE L1 6436 6851 -793 2 720 603 234 43 47 chr13 17709564 17709797 -102574515 - Lx7 LINE L1 -1685 6011 5780 2 720 8636 141 39 2 chr13 17709790 17712356 -102571956 - L1_Mus4 LINE L1 -6 6630 3955 2 720 4093 251 79 57 chr13 17712336 17713174 -102571138 - L1_Mur3 LINE L1 -2395 3485 2575 2 720 474 61 0 0 chr13 17713174 17713240 -102571072 + (TTGG)n Simple_repeat Simple_repeat 2 67 0 2 720 4093 251 79 57 chr13 17713240 17714175 -102570137 - L1_Mur3 LINE L1 -3306 2574 1673 2 720 827 254 108 13 chr13 17714825 17715140 -102569172 - L1MB3 LINE L1 -57 6126 5782 2 720 348 248 0 0 chr13 17715150 17715283 -102569029 + (TG)n Simple_repeat Simple_repeat 2 134 0 2 720 374 265 15 0 chr13 17715302 17715401 -102568911 - PB1D10 SINE Alu -8 112 10 2 720 645 207 22 77 chr13 17715472 17715655 -102568657 - L1M4 LINE L1 -711 5473 5301 2 720 423 0 0 0 chr13 17715808 17715855 -102568457 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 2 720 700 303 123 4 chr13 17716335 17716570 -102567742 - B4A SINE B4 -29 263 1 2 720 300 243 14 0 chr13 17716984 17717058 -102567254 - ID4_ SINE ID -6 77 3 2 720 220 304 0 0 chr13 17717079 17717125 -102567187 - B1F1 SINE Alu -102 47 2 2 720 17210 111 7 40 chr13 17717367 17718250 -102566062 + Lx2 LINE L1 748 1619 -4267 2 720 1212 48 0 7 chr13 17718250 17718398 -102565914 + B1_Mm SINE Alu 1 147 0 2 720 17210 169 7 122 chr13 17718398 17720713 -102563599 + Lx2 LINE L1 1620 3461 -2425 2 720 3402 28 5 2 chr13 17720713 17721108 -102563204 + MTA_Mm LTR MaLR 1 396 0 2 720 17210 169 7 122 chr13 17721108 17721289 -102563023 + Lx2 LINE L1 3462 3640 -2246 2 720 1657 164 93 26 chr13 17721289 17721634 -102562678 + RLTR9A LTR ERVK 1 368 0 2 720 17210 147 9 15 chr13 17721634 17724665 -102559647 + Lx2 LINE L1 3633 6643 -354 2 720 1484 117 0 9 chr13 17724665 17724890 -102559422 + Lx2 LINE L1 6775 6997 0 2 720 232 329 86 43 chr13 17724992 17725154 -102559158 + MER34 LTR ERV1 310 478 -64 2 720 29 28 0 0 chr13 17725190 17725226 -102559086 + AT_rich Low_complexity Low_complexity 1 36 0 3 720 7477 78 2 7 chr13 17725417 17726469 -102557843 - L1_Mus3 LINE L1 -5 6633 5587 3 720 1783 234 21 36 chr13 17727209 17727782 -102556530 + Lx9 LINE L1 5365 5965 -1679 3 720 1135 151 62 19 chr13 17727861 17728071 -102556241 - ORR1B1 LTR MaLR -39 355 137 3 720 291 62 0 20 chr13 17728071 17728120 -102556192 - Lx4B LINE L1 -1252 5806 5759 3 720 1559 174 14 20 chr13 17728120 17728413 -102555899 + Lx4A LINE L1 6768 7058 0 3 720 27 0 0 0 chr13 17728413 17728440 -102555872 + AT_rich Low_complexity Low_complexity 1 27 0 3 720 1068 105 0 0 chr13 17728440 17728592 -102555720 - ORR1B1 LTR MaLR -242 152 1 3 720 547 329 119 37 chr13 17728592 17729021 -102555291 + Lx9 LINE L1 7007 7470 -174 3 720 831 255 105 20 chr13 17729170 17729474 -102554838 + Lx8 LINE L1 7106 7435 -38 3 720 504 243 72 22 chr13 17729682 17729821 -102554491 - ID_B1 SINE B4 -3 221 76 3 720 23 78 0 0 chr13 17730427 17730478 -102553834 + AT_rich Low_complexity Low_complexity 1 51 0 3 720 300 158 0 17 chr13 17730720 17730778 -102553534 - MTC LTR MaLR -5 416 360 3 720 497 158 0 0 chr13 17730780 17730862 -102553450 - MTC LTR MaLR -339 82 1 3 720 2805 85 3 11 chr13 17731049 17731431 -102552881 - L1_Mus1 LINE L1 0 6567 6189 3 720 4606 49 0 0 chr13 17731431 17732021 -102552291 + L1Md_F2 LINE L1 5626 6215 -367 3 720 489 201 73 42 chr13 17732020 17732212 -102552100 - L1M5 LINE L1 -945 5201 5004 3 720 21 0 0 0 chr13 17733801 17733822 -102550490 + AT_rich Low_complexity Low_complexity 1 21 0 3 720 37 52 0 0 chr13 17733929 17733987 -102550325 + AT_rich Low_complexity Low_complexity 1 58 0 3 720 244 274 24 96 chr13 17733990 17734115 -102550197 - RLTR25B LTR ERVK -471 557 442 3 720 715 191 0 59 chr13 17734006 17734173 -102550139 - B1_Mur3 SINE Alu -3 146 1 3 720 22 0 0 0 chr13 17734654 17734676 -102549636 + AT_rich Low_complexity Low_complexity 1 22 0 3 720 710 173 43 0 chr13 17734924 17735063 -102549249 + MTD LTR MaLR 3 147 -272 3 720 294 217 97 2 chr13 17735067 17735154 -102549158 + MTD LTR MaLR 317 413 -8 3 720 22 56 0 0 chr13 17735260 17735296 -102549016 + AT_rich Low_complexity Low_complexity 1 36 0 3 720 1238 282 48 21 chr13 17735311 17735915 -102548397 - L1MA4 LINE L1 -175 5996 5387 3 720 496 281 15 65 chr13 17736217 17736364 -102547948 + ID_B1 SINE B4 85 221 -3 3 720 1834 93 15 4 chr13 17737356 17737625 -102546687 + L1_Mus3 LINE L1 6367 6638 0 3 720 538 204 27 53 chr13 17738000 17738144 -102546168 - MTD LTR MaLR -15 404 265 3 720 4464 182 49 36 chr13 17738144 17739024 -102545288 - RMER19B LTR ERVK 0 902 12 3 720 925 259 28 9 chr13 17739025 17739243 -102545069 - MTD LTR MaLR -180 239 18 3 720 608 277 111 11 chr13 17739578 17739768 -102544544 + B3 SINE B2 1 209 -7 3 720 470 325 8 0 chr13 17739815 17739932 -102544380 + RSINE1 SINE B4 44 161 -4 3 720 972 247 16 8 chr13 17740025 17740278 -102544034 - Lx6 LINE L1 -39 7421 7167 3 720 442 255 40 10 chr13 17740279 17740378 -102543934 - RMER20B LTR ERVK -25 602 501 3 720 3489 247 72 23 chr13 17740485 17741024 -102543288 - Lx6 LINE L1 -563 6897 6320 3 720 2050 120 12 52 chr13 17741024 17741367 -102542945 - ORR1A4 LTR MaLR 0 329 1 3 720 3489 247 72 23 chr13 17741367 17741841 -102542471 - Lx6 LINE L1 -1141 6319 5834 3 720 1661 150 3 71 chr13 17741842 17742150 -102542162 + ORR1A4 LTR MaLR 1 287 -42 3 720 1454 84 107 0 chr13 17742150 17742375 -102541937 - L1_Mm LINE L1 -766 5117 4869 3 720 21 57 0 0 chr13 17742713 17742748 -102541564 + AT_rich Low_complexity Low_complexity 1 35 0 3 720 1008 232 58 4 chr13 17742757 17743034 -102541278 + Lx8 LINE L1 6741 7032 -441 3 720 231 36 0 0 chr13 17743307 17743335 -102540977 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 3 720 527 226 36 29 chr13 17743335 17743472 -102540840 - B1_Mur1 SINE Alu -10 139 2 3 720 231 173 0 0 chr13 17743721 17743773 -102540539 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 3 720 372 119 0 0 chr13 17743803 17743862 -102540450 + (TTGG)n Simple_repeat Simple_repeat 2 60 0 3 720 4102 142 107 27 chr13 17744330 17745163 -102539149 + RLTR13D6 LTR ERVK 1 929 0 3 720 1825 254 55 52 chr13 17745284 17745828 -102538484 - RLTR1D LTR ERV1 0 605 60 3 720 883 309 60 45 chr13 17746437 17747302 -102537010 + L1_Mur3 LINE L1 1585 2462 -3418 3 720 775 187 335 108 chr13 17747348 17747700 -102536612 + MT2A LTR ERVL 23 453 -80 3 720 692 11 0 33 chr13 17747700 17747790 -102536522 + (TAGA)n Simple_repeat Simple_repeat 4 90 0 3 720 250 212 66 29 chr13 17747790 17747926 -102536386 + (ATATG)n Simple_repeat Simple_repeat 2 142 0 3 720 986 75 28 17 chr13 17747935 17748112 -102536200 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 3 720 280 93 0 0 chr13 17748119 17748162 -102536150 + MT2A LTR ERVL 488 530 -3 3 720 399 262 40 82 chr13 17748167 17748362 -102535950 + L1_Rod LINE L1 2592 2809 -3038 3 720 1116 154 119 0 chr13 17748362 17748563 -102535749 - URR1A DNA MER1_type -1 225 1 3 720 399 261 42 84 chr13 17748563 17748642 -102535670 + L1_Rod LINE L1 2810 2884 -2963 3 720 1367 97 44 0 chr13 17748642 17748848 -102535464 + Lx2 LINE L1 6782 6996 -1 3 720 399 261 42 84 chr13 17748848 17748871 -102535441 + L1_Rod LINE L1 2885 2905 -2942 3 720 3051 288 58 20 chr13 17748926 17750044 -102534268 + ERVL-int LTR ERVL 1341 2501 -3256 3 720 2036 296 80 0 chr13 17750588 17751314 -102532998 + ERVL-int LTR ERVL 2511 3294 -2463 3 720 1159 75 0 0 chr13 17751316 17751462 -102532850 + B1_Mus2 SINE Alu 2 147 0 3 720 24 0 0 0 chr13 17751530 17751554 -102532758 + AT_rich Low_complexity Low_complexity 1 24 0 3 720 319 304 112 0 chr13 17751868 17751993 -102532319 - MIR SINE MIR -121 141 3 3 720 455 258 39 107 chr13 17752089 17752208 -102532104 - MER57C2 LTR ERV1 0 434 325 3 720 3417 57 28 0 chr13 17752208 17752632 -102531680 + RLTR10C LTR ERVK 1 436 0 3 720 455 237 217 39 chr13 17752632 17752837 -102531475 - MER57C2 LTR ERV1 -110 324 17 3 720 733 173 8 0 chr13 17752973 17753106 -102531206 + B1_Mus2 SINE Alu 13 146 -1 3 720 192 152 0 0 chr13 17753119 17753152 -102531160 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 3 720 389 284 82 34 chr13 17753155 17753301 -102531011 - RSINE1 SINE B4 -10 155 3 3 720 1298 71 0 47 chr13 17753407 17753600 -102530712 + B2_Mm2 SINE B2 3 186 -9 3 720 249 254 90 0 chr13 17753745 17753867 -102530445 + Lx9 LINE L1 7497 7629 -15 3 720 269 302 51 120 chr13 17755146 17755304 -102529008 + B4A SINE B4 1 147 -145 3 720 306 0 0 0 chr13 17755368 17755402 -102528910 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 720 571 266 0 0 chr13 17755929 17756057 -102528255 - ID_B1 SINE B4 -7 217 90 3 720 242 294 77 49 chr13 17755931 17756074 -102528238 + YREP_Mm Unknown Unknown 186 332 -1480 3 720 309 308 26 35 chr13 17756418 17756647 -102527665 + L1VL2 LINE L1 147 373 -5962 3 720 242 0 0 57 chr13 17756654 17756689 -102527623 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 3 720 1197 48 7 0 chr13 17756697 17756844 -102527468 - B1_Mus1 SINE Alu 0 148 1 3 720 1349 241 28 67 chr13 17756847 17757310 -102527002 + L1VL4 LINE L1 273 717 -5585 3 720 1655 194 22 41 chr13 17757323 17757737 -102526575 + Lx LINE L1 6249 6654 0 3 720 10768 143 28 14 chr13 17757712 17760960 -102523352 + Lx2B LINE L1 3694 6997 -3 3 720 198 167 0 0 chr13 17760978 17761014 -102523298 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 3 720 6794 178 35 20 chr13 17761060 17762909 -102521403 - Lx5 LINE L1 -5 7045 5176 3 720 193 242 60 15 chr13 17763195 17763262 -102521050 + MIR SINE MIR 165 234 -28 3 720 247 271 122 15 chr13 17763740 17763871 -102520441 + L1M5 LINE L1 5586 5730 -394 3 720 800 176 14 0 chr13 17763984 17764126 -102520186 + B1_Mus1 SINE Alu 5 148 0 3 720 3011 125 198 8 chr13 17764971 17765577 -102518735 - Lx LINE L1 -3 6651 5931 3 720 273 351 21 0 chr13 17766008 17766102 -102518210 + RSINE1 SINE B4 1 96 -69 3 720 220 304 0 102 chr13 17766125 17766213 -102518099 + RSINE1 SINE B4 87 165 0 3 720 414 0 0 0 chr13 17766454 17766500 -102517812 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 720 764 258 7 0 chr13 17766527 17766682 -102517630 - B3A SINE B2 -42 156 1 3 720 2215 165 50 8 chr13 17767132 17767528 -102516784 - MTC LTR MaLR -8 413 1 3 720 8878 78 26 8 chr13 17767711 17769352 -102514960 - Lx3A LINE L1 -17 6964 5284 3 720 308 43 0 21 chr13 17769352 17769399 -102514913 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 3 720 6126 71 0 7 chr13 17769399 17769643 -102514669 - Lx3A LINE L1 -603 5283 5045 3 720 941 231 183 17 chr13 17769642 17770117 -102514195 + L1_Mur3 LINE L1 4171 4724 -1156 3 720 711 304 92 16 chr13 17770105 17770557 -102513755 + L1_Rod LINE L1 4808 5371 -769 3 720 4481 82 12 8 chr13 17770567 17771227 -102513085 - Lx3_Mus LINE L1 -32 6977 6315 3 720 696 208 23 0 chr13 17771348 17771478 -102512834 + B1_Mur1 SINE Alu 4 136 -13 3 720 432 0 0 0 chr13 17771478 17771526 -102512786 + (CAA)n Simple_repeat Simple_repeat 1 48 0 3 720 604 213 23 79 chr13 17771553 17771767 -102512545 + L1_Rod LINE L1 5430 5631 -216 3 720 407 296 30 0 chr13 17771793 17771928 -102512384 - Lx7 LINE L1 -591 7105 6967 3 720 663 233 213 77 chr13 17772086 17772490 -102511822 - RMER21B LTR ERV1 -277 565 107 3 720 283 162 250 0 chr13 17772479 17772547 -102511765 + B3 SINE B2 132 216 0 3 720 575 295 0 0 chr13 17772552 17772708 -102511604 + Lx8 LINE L1 6562 6717 -756 3 720 354 336 19 64 chr13 17772709 17772973 -102511339 + RLTR15 LTR ERVK 92 343 -16 3 720 1262 262 99 7 chr13 17773012 17773415 -102510897 + Lx8 LINE L1 6805 7244 -229 3 720 224 152 0 21 chr13 17773691 17773738 -102510574 + A-rich Low_complexity Low_complexity 1 46 0 3 720 667 197 40 40 chr13 17773778 17773926 -102510386 - B1_Mur1 SINE Alu 0 149 2 3 720 256 274 109 73 chr13 17773926 17773947 -102510365 - YREP_Mm Unknown Unknown -1493 319 273 3 720 882 78 68 30 chr13 17773947 17774079 -102510233 + B1_Mus1 SINE Alu 12 148 0 3 720 256 274 109 73 chr13 17774079 17774164 -102510148 - YREP_Mm Unknown Unknown -1493 272 72 3 720 254 237 17 17 chr13 17774190 17774250 -102510062 + ID_B1 SINE B4 105 164 -60 3 720 238 250 100 46 chr13 17774274 17774404 -102509908 + B1F SINE Alu 12 148 -1 3 720 1371 315 81 13 chr13 17774549 17775105 -102509207 - MER82 DNA MER2_type -38 615 22 3 720 348 244 39 0 chr13 17775168 17775246 -102509066 + B3A SINE B2 43 123 -75 3 720 668 227 14 0 chr13 17775247 17775388 -102508924 + B1F SINE Alu 4 146 -3 4 720 250 297 9 82 chr13 17775557 17775667 -102508645 + MT2B LTR ERVL 168 269 -332 4 720 781 155 0 15 chr13 17775571 17775702 -102508610 + B1_Mus2 SINE Alu 18 146 -1 4 720 625 180 18 0 chr13 17776520 17776631 -102507681 + PB1D9 SINE Alu 1 113 -7 4 720 891 286 13 35 chr13 17776704 17776932 -102507380 + B4 SINE B4 1 223 -69 4 720 222 167 0 0 chr13 17776932 17776992 -102507320 + A-rich Low_complexity Low_complexity 1 60 0 4 720 233 276 39 13 chr13 17776994 17777071 -102507241 + B4 SINE B4 212 290 -2 4 720 206 32 32 0 chr13 17777085 17777116 -102507196 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 720 1350 207 23 36 chr13 17777226 17777532 -102506780 + Lx5 LINE L1 6571 6872 -178 4 720 3789 31 61 136 chr13 17777533 17778174 -102506138 - RLTR6_Mm LTR ERV1 -61 593 1 4 720 449 243 22 66 chr13 17778176 17778357 -102505955 + Lx5 LINE L1 6878 7050 0 4 720 226 206 14 14 chr13 17778370 17778444 -102505868 + GA-rich Low_complexity Low_complexity 3 76 0 4 720 381 290 0 0 chr13 17778502 17778609 -102505703 + Lx8 LINE L1 6727 6833 -640 4 720 297 0 0 0 chr13 17778735 17778768 -102505544 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 720 769 287 98 51 chr13 17778776 17779081 -102505231 + Lx8 LINE L1 6973 7304 -169 4 720 2431 93 54 221 chr13 17779081 17779673 -102504639 + MT2_Mm LTR ERVL 1 493 0 4 720 769 287 98 51 chr13 17779673 17779797 -102504515 + Lx8 LINE L1 7305 7422 -51 4 720 554 169 24 0 chr13 17779909 17780033 -102504279 + Lx9 LINE L1 7511 7637 -7 4 720 288 284 33 33 chr13 17780407 17780498 -102503814 - L1M5 LINE L1 -2264 5618 5528 4 720 1184 43 0 0 chr13 17780522 17780661 -102503651 + B1_Mm SINE Alu 1 139 -8 4 720 504 281 67 0 chr13 17780945 17781080 -102503232 + B1_Mur1 SINE Alu 1 144 -5 4 720 416 295 154 41 chr13 17781311 17781667 -102502645 - MLT1A1 LTR MaLR -16 392 3 4 720 922 132 250 6 chr13 17782369 17782537 -102501775 + B3 SINE B2 1 209 -7 4 720 1184 54 0 0 chr13 17782962 17783109 -102501203 - B1_Mus2 SINE Alu 0 147 1 4 720 336 345 72 66 chr13 17783631 17783783 -102500529 + Charlie15a DNA MER1_type 22 174 -50 4 720 306 0 0 0 chr13 17783849 17783883 -102500429 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 720 658 265 13 20 chr13 17784505 17784655 -102499657 - B1_Mur3 SINE Alu 0 149 1 4 720 23 0 0 0 chr13 17784763 17784786 -102499526 + AT_rich Low_complexity Low_complexity 1 23 0 4 720 279 156 0 22 chr13 17785448 17785494 -102498818 + B1F SINE Alu 104 148 -1 4 720 908 226 34 29 chr13 17785736 17785941 -102498371 + B3 SINE B2 1 206 -10 4 720 290 257 45 45 chr13 17786620 17786775 -102497537 + C-rich Low_complexity Low_complexity 2 156 0 4 720 25 31 0 0 chr13 17787410 17787442 -102496870 + GC_rich Low_complexity Low_complexity 1 32 0 4 720 281 293 232 30 chr13 17787660 17787871 -102496441 - MIRb SINE MIR -1 261 3 4 720 1961 48 0 16 chr13 17790045 17790299 -102494013 - L1_Mus1 LINE L1 0 6567 6318 4 720 186 255 43 0 chr13 17790634 17790681 -102493631 + MIR SINE MIR 116 164 -98 4 720 190 391 0 11 chr13 17790676 17790764 -102493548 + L2b LINE L2 3289 3375 0 4 720 275 284 125 0 chr13 17790993 17791081 -102493231 + PB1 SINE Alu 1 99 -28 4 720 628 180 105 38 chr13 17791296 17791429 -102492883 - B1_Mur1 SINE Alu -1 148 7 4 720 589 234 87 7 chr13 17791453 17791591 -102492721 + B1_Mur2 SINE Alu 1 149 0 4 720 278 312 153 51 chr13 17791689 17791885 -102492427 + Charlie2a DNA MER1_type 6 221 -2640 4 720 326 307 149 7 chr13 17791890 17792031 -102492281 + MLT1B LTR MaLR 7 167 -412 4 720 216 0 0 0 chr13 17792157 17792181 -102492131 + (T)n Simple_repeat Simple_repeat 1 24 0 4 720 458 225 19 29 chr13 17792403 17792508 -102491804 + PB1D9 SINE Alu 17 120 0 4 720 539 229 0 46 chr13 17792513 17792664 -102491648 - L1MA5 LINE L1 -439 5861 5718 4 720 468 248 131 8 chr13 17792733 17792863 -102491449 - RSINE1 SINE B4 -18 147 2 4 720 544 219 29 0 chr13 17792954 17793059 -102491253 + B3 SINE B2 1 108 -108 4 720 1135 189 13 31 chr13 17793062 17793291 -102491021 - URR1A DNA MER1_type -1 225 1 4 720 905 285 108 94 chr13 17793396 17793715 -102490597 + Lx8 LINE L1 6807 7141 -332 4 720 517 268 65 25 chr13 17793715 17793914 -102490398 + B3 SINE B2 1 207 -9 4 720 905 285 108 94 chr13 17793914 17794244 -102490068 + Lx8 LINE L1 7142 7465 -8 4 720 332 222 56 0 chr13 17794301 17794391 -102489921 + L1MC LINE L1 5055 5149 -997 4 720 928 155 0 20 chr13 17794409 17794560 -102489752 + B1_Mur4 SINE Alu 3 150 0 4 720 362 239 103 26 chr13 17794631 17794747 -102489565 + B1F2 SINE Alu 25 149 0 4 720 239 227 133 0 chr13 17794779 17794854 -102489458 + L1MC LINE L1 5426 5510 -823 4 720 595 221 137 0 chr13 17794854 17794985 -102489327 - B3 SINE B2 -65 151 3 4 720 1155 81 0 0 chr13 17795750 17795898 -102488414 - B1_Mus1 SINE Alu 0 148 1 4 720 551 168 113 15 chr13 17796415 17796548 -102487764 + MLT1B LTR MaLR 245 390 0 4 720 662 262 37 6 chr13 17797051 17797212 -102487100 - B3 SINE B2 -11 205 40 4 720 408 181 14 0 chr13 17797210 17797282 -102487030 - B3 SINE B2 -133 83 11 4 720 780 241 42 11 chr13 17797763 17797952 -102486360 + B3 SINE B2 1 195 -21 4 720 556 204 26 9 chr13 17799009 17799112 -102485200 + ID_B1 SINE B4 107 212 -12 4 720 243 0 0 0 chr13 17799112 17799139 -102485173 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 720 180 111 0 0 chr13 17799722 17799749 -102484563 + (TATATG)n Simple_repeat Simple_repeat 5 31 0 4 720 1109 115 0 0 chr13 17799757 17799914 -102484398 - B2_Mm2 SINE B2 -37 158 2 4 720 23 33 0 0 chr13 17800439 17800469 -102483843 + AT_rich Low_complexity Low_complexity 1 30 0 4 720 1355 273 56 0 chr13 17800877 17801236 -102483076 + MTE2b LTR MaLR 1 379 0 4 720 363 331 70 16 chr13 17801424 17801553 -102482759 - RSINE1 SINE B4 -29 136 1 4 720 21 0 0 0 chr13 17801965 17801986 -102482326 + AT_rich Low_complexity Low_complexity 1 21 0 4 720 718 166 37 5 chr13 17802003 17802149 -102482163 - B1_Mus1 SINE Alu 0 150 1 4 720 231 329 26 13 chr13 17802199 17802276 -102482036 + ID4_ SINE ID 4 81 -2 4 720 446 242 191 46 chr13 17802397 17802570 -102481742 + B3A SINE B2 1 198 0 4 720 314 266 74 24 chr13 17802622 17802741 -102481571 + PB1D10 SINE Alu 6 124 -25 4 720 244 288 54 14 chr13 17803161 17803235 -102481077 + PB1 SINE Alu 27 103 -24 4 720 590 247 37 58 chr13 17803986 17804175 -102480137 + B3A SINE B2 1 185 -13 4 720 707 257 77 34 chr13 17804418 17804627 -102479685 - ID_B1 SINE B4 -2 222 5 4 720 1398 80 11 0 chr13 17805579 17805767 -102478545 + B2_Mm1t SINE B2 1 190 -3 4 720 407 235 101 43 chr13 17806207 17806345 -102477967 - B1F2 SINE Alu -2 147 2 4 720 214 274 93 27 chr13 17806361 17806436 -102477876 - ID4_ SINE ID -2 81 2 4 720 254 284 135 11 chr13 17806521 17806610 -102477702 + ID_B1 SINE B4 71 170 -54 4 720 295 244 92 11 chr13 17806531 17806618 -102477694 + PB1D10 SINE Alu 6 99 -18 4 720 30 0 0 0 chr13 17807797 17807827 -102476485 + AT_rich Low_complexity Low_complexity 1 30 0 4 720 216 0 0 0 chr13 17808441 17808465 -102475847 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 720 623 250 7 0 chr13 17812354 17812490 -102471822 + B1_Mur2 SINE Alu 1 137 -12 4 720 1153 264 44 36 chr13 17813321 17813706 -102470606 - Lx8 LINE L1 0 7473 7086 4 720 26 30 0 0 chr13 17813762 17813795 -102470517 + AT_rich Low_complexity Low_complexity 1 33 0 4 720 275 287 137 10 chr13 17814206 17814308 -102470004 - MIR SINE MIR -56 206 92 4 720 296 306 216 11 chr13 17814357 17814542 -102469770 + Charlie2b DNA MER1_type 6 228 -2554 4 720 328 300 95 35 chr13 17814542 17814773 -102469539 + L1ME3B LINE L1 5839 6083 -157 4 720 344 206 82 27 chr13 17814852 17814962 -102469350 + L1ME5 LINE L1 6067 6182 -12 4 720 731 245 241 3 chr13 17814962 17815261 -102469051 + Charlie2b DNA MER1_type 212 581 -2201 4 720 358 248 43 34 chr13 17815445 17815562 -102468750 + MIR SINE MIR 44 161 -101 4 720 769 266 45 0 chr13 17816271 17816425 -102467887 - B3 SINE B2 -24 192 32 4 720 307 265 126 10 chr13 17817814 17817917 -102466395 + PB1D10 SINE Alu 3 117 0 4 720 252 0 0 0 chr13 17817937 17817965 -102466347 + (A)n Simple_repeat Simple_repeat 1 28 0 4 720 199 236 273 0 chr13 17818097 17818152 -102466160 - MIRb SINE MIR -175 93 24 4 720 416 295 46 15 chr13 17818498 17818629 -102465683 + MIRb SINE MIR 45 179 -89 4 720 22 0 0 0 chr13 17819165 17819187 -102465125 + AT_rich Low_complexity Low_complexity 1 22 0 4 720 21 71 0 0 chr13 17819240 17819282 -102465030 + AT_rich Low_complexity Low_complexity 1 42 0 4 720 25 99 0 0 chr13 17820018 17820099 -102464213 + AT_rich Low_complexity Low_complexity 1 81 0 4 720 1683 21 0 0 chr13 17821027 17821218 -102463094 - B2_Mm1a SINE B2 -2 191 1 4 720 295 286 0 0 chr13 17822492 17822562 -102461750 - ID4_ SINE ID -11 72 3 4 720 196 280 32 0 chr13 17822857 17822920 -102461392 - MIRm SINE MIR -187 89 25 4 720 403 303 52 22 chr13 17823593 17823728 -102460584 + B1F1 SINE Alu 2 140 -9 4 720 21 0 0 0 chr13 17823990 17824011 -102460301 + AT_rich Low_complexity Low_complexity 1 21 0 4 720 227 221 334 7 chr13 17824075 17824231 -102460081 + B3A SINE B2 1 206 -10 4 720 961 246 10 20 chr13 17824343 17824542 -102459770 - B3A SINE B2 -1 197 1 4 720 5240 34 5 0 chr13 17824676 17825303 -102459009 - L1Md_A LINE L1 0 6582 5953 4 11 1172 68 0 0 chr13 17825715 17825862 -102458450 - B1_Mus2 SINE Alu 0 147 1 4 721 1049 108 0 0 chr13 17826096 17826244 -102458068 - B1_Mus1 SINE Alu 0 148 1 5 721 432 171 0 0 chr13 17826349 17826431 -102457881 + (TA)n Simple_repeat Simple_repeat 1 82 0 5 721 690 110 110 0 chr13 17827089 17827216 -102457096 + L1_Mur2 LINE L1 131 271 -6441 5 721 1825 122 73 51 chr13 17827216 17827653 -102456659 + Lx4A LINE L1 6514 7057 -1 5 721 281 290 225 51 chr13 17829112 17829250 -102455062 - RSINE1 SINE B4 0 165 4 5 721 483 314 8 0 chr13 17830187 17830305 -102454007 + PB1D7 SINE Alu 1 119 -1 5 721 1061 197 33 9 chr13 17831105 17831315 -102452997 + Lx5 LINE L1 6673 6887 -163 5 721 294 227 155 0 chr13 17831311 17831408 -102452904 + Lx4B LINE L1 6942 7053 -5 5 721 427 225 17 35 chr13 17831783 17831898 -102452414 - PB1D10 SINE Alu -3 114 2 5 721 714 150 111 15 chr13 17832169 17832304 -102452008 - B1_Mus1 SINE Alu 0 148 1 5 721 246 312 48 28 chr13 17832812 17832957 -102451355 - B1F2 SINE Alu -1 148 1 5 721 28 61 0 0 chr13 17833389 17833438 -102450874 + AT_rich Low_complexity Low_complexity 1 49 0 5 721 1354 166 110 18 chr13 17834181 17834392 -102449920 + RLTR11A LTR ERVK 221 457 -71 5 721 462 18 0 0 chr13 17834392 17834447 -102449865 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 721 1354 166 110 18 chr13 17834447 17834517 -102449795 + RLTR11A LTR ERVK 458 527 -1 5 721 260 232 35 47 chr13 17834960 17835046 -102449266 + MLT1J1 LTR MaLR 42 126 -318 5 721 203 358 55 12 chr13 17835426 17835590 -102448722 + L2 LINE L2 2677 2847 -572 5 721 392 231 0 77 chr13 17835783 17835900 -102448412 + PB1D10 SINE Alu 10 117 0 5 721 1096 189 16 0 chr13 17836993 17837183 -102447129 + B3 SINE B2 1 193 -23 5 721 249 383 0 0 chr13 17838396 17838477 -102445835 - ID4 SINE ID -1 82 2 5 721 718 278 5 32 chr13 17838498 17838684 -102445628 - B3 SINE B2 -1 215 35 5 721 328 274 89 54 chr13 17838777 17838889 -102445423 + B1F SINE Alu 28 143 -6 5 721 237 65 0 0 chr13 17839348 17839379 -102444933 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 721 201 169 51 0 chr13 17839381 17839440 -102444872 + (CATA)n Simple_repeat Simple_repeat 2 63 0 5 721 341 299 0 75 chr13 17839835 17839847 -102444465 + MT2B LTR ERVL 155 159 -442 5 721 455 328 17 8 chr13 17839847 17839964 -102444348 + PB1D9 SINE Alu 3 120 0 5 721 261 171 67 124 chr13 17840019 17840083 -102444229 + L1MA8 LINE L1 5699 5764 -533 5 721 1340 108 0 15 chr13 17840083 17840281 -102444031 + B2_Mm2 SINE B2 1 195 0 5 721 261 169 63 126 chr13 17840281 17840322 -102443990 + L1MA8 LINE L1 5765 5801 -496 5 721 229 241 91 18 chr13 17840315 17840425 -102443887 + Lx8 LINE L1 7352 7469 -4 5 721 723 239 87 102 chr13 17840462 17840541 -102443771 + L1MA8 LINE L1 5838 5922 -369 5 721 279 0 0 0 chr13 17840541 17840572 -102443740 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 721 1031 99 0 23 chr13 17840572 17840747 -102443565 + (TA)n Simple_repeat Simple_repeat 1 172 0 5 721 723 239 87 102 chr13 17840747 17841105 -102443207 + L1MA8 LINE L1 5923 6268 -23 5 721 25 31 0 0 chr13 17841582 17841614 -102442698 + AT_rich Low_complexity Low_complexity 1 32 0 5 721 26 0 0 0 chr13 17841672 17841698 -102442614 + AT_rich Low_complexity Low_complexity 1 26 0 5 721 952 231 15 5 chr13 17841807 17842011 -102442301 + B3 SINE B2 2 207 -9 5 721 199 50 75 0 chr13 17842250 17842290 -102442022 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 5 721 716 254 36 21 chr13 17843034 17843227 -102441085 + B3 SINE B2 9 204 -12 5 721 348 174 32 10 chr13 17844234 17844306 -102440006 + B1_Mus2 SINE Alu 52 147 0 5 721 229 313 0 29 chr13 17845853 17845922 -102438390 + PB1D10 SINE Alu 42 108 -9 5 721 718 93 246 0 chr13 17845963 17846081 -102438231 + B1_Mus1 SINE Alu 2 148 0 5 721 579 29 0 0 chr13 17846098 17846167 -102438145 + (GGGA)n Simple_repeat Simple_repeat 4 72 0 5 721 854 235 47 0 chr13 17846173 17846343 -102437969 + B3A SINE B2 3 180 -18 5 721 1018 278 65 35 chr13 17846845 17847184 -102437128 + ORR1E LTR MaLR 4 352 -7 5 721 31 26 0 0 chr13 17847292 17847330 -102436982 + AT_rich Low_complexity Low_complexity 1 38 0 5 721 965 96 186 0 chr13 17847335 17847491 -102436821 + B2_Mm2 SINE B2 3 187 -8 5 721 755 250 169 0 chr13 17847536 17847772 -102436540 + B4A SINE B4 4 279 -13 5 721 677 189 0 39 chr13 17848260 17848387 -102435925 + URR1B DNA MER1_type 1 122 -103 5 721 384 286 52 24 chr13 17848391 17848602 -102435710 + L1MCa LINE L1 1097 1313 -5195 5 721 679 246 91 128 chr13 17849144 17849442 -102434870 - B4A SINE B4 -5 287 1 5 721 322 188 35 0 chr13 17849624 17849709 -102434603 + (TATG)n Simple_repeat Simple_repeat 4 91 0 5 721 427 278 78 52 chr13 17849818 17850051 -102434261 - L1MB3 LINE L1 -14 6169 5926 5 721 501 94 0 0 chr13 17850051 17850136 -102434176 + (TGAG)n Simple_repeat Simple_repeat 2 86 0 5 721 427 278 78 52 chr13 17850136 17850171 -102434141 - L1MB3 LINE L1 -258 5925 5894 5 721 253 290 22 129 chr13 17850160 17850338 -102433974 - L1MB3 LINE L1 -697 5486 5328 5 721 1047 78 0 7 chr13 17850351 17850493 -102433819 - B1_Mus2 SINE Alu 0 147 7 5 721 5694 8 0 8 chr13 17850771 17851415 -102432897 + L1Md_T LINE L1 5941 6579 -3 5 721 189 0 0 0 chr13 17851418 17851439 -102432873 + (A)n Simple_repeat Simple_repeat 1 21 0 5 721 270 69 14 41 chr13 17851443 17851505 -102432807 + B1_Mus2 SINE Alu 1 58 -90 5 721 243 114 0 0 chr13 17851505 17851549 -102432763 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 721 201 39 0 0 chr13 17851851 17851877 -102432435 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 721 233 327 45 45 chr13 17851882 17851994 -102432318 - MIRc SINE MIR -117 151 40 5 721 4548 51 25 2 chr13 17852087 17852743 -102431569 - L1_Mus3 LINE L1 -640 5926 5241 5 721 5065 95 6 3 chr13 17852743 17853458 -102430854 + L1_Mus3 LINE L1 5920 6636 -2 5 721 1066 292 62 14 chr13 17853649 17854041 -102430271 + MTD LTR MaLR 1 408 -13 5 721 412 257 184 97 chr13 17854270 17854537 -102429775 + B4A SINE B4 3 292 0 5 721 228 35 0 0 chr13 17854662 17854691 -102429621 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 721 21 0 0 0 chr13 17855247 17855268 -102429044 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 30 27 0 0 chr13 17855802 17855839 -102428473 + AT_rich Low_complexity Low_complexity 1 37 0 5 721 519 211 0 18 chr13 17855962 17856073 -102428239 + PB1D9 SINE Alu 2 110 -10 5 721 353 301 0 17 chr13 17856335 17856450 -102427862 + PB1D10 SINE Alu 4 116 -1 5 721 189 107 0 0 chr13 17857318 17857346 -102426966 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 721 242 194 91 64 chr13 17858617 17858727 -102425585 + L1MC3 LINE L1 7557 7669 -116 5 721 527 274 114 107 chr13 17858786 17859076 -102425236 + B4A SINE B4 1 292 0 5 721 436 198 19 111 chr13 17859301 17859409 -102424903 + PB1D9 SINE Alu 22 119 -1 5 721 1148 55 7 0 chr13 17859412 17859557 -102424755 + B1_Mus2 SINE Alu 2 147 0 5 721 204 133 0 62 chr13 17859840 17859888 -102424424 + T-rich Low_complexity Low_complexity 2 46 0 5 721 599 211 39 0 chr13 17860422 17860526 -102423786 + B1_Mur1 SINE Alu 6 113 -36 5 721 426 297 93 0 chr13 17860526 17860540 -102423772 + B4 SINE B4 91 219 -73 5 721 207 0 0 0 chr13 17860546 17860569 -102423743 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 5 721 558 215 62 0 chr13 17860827 17860957 -102423355 + B1_Mur4 SINE Alu 11 148 -2 5 721 326 291 61 80 chr13 17861479 17861741 -102422571 + L1MC4 LINE L1 7140 7396 -646 5 721 1254 98 16 0 chr13 17861906 17862090 -102422222 + B2_Mm2 SINE B2 9 195 0 5 721 24 0 0 0 chr13 17862258 17862282 -102422030 + AT_rich Low_complexity Low_complexity 1 24 0 5 721 1080 166 18 44 chr13 17862305 17862532 -102421780 + URR1B DNA MER1_type 5 225 0 5 721 28 0 0 0 chr13 17863114 17863142 -102421170 + AT_rich Low_complexity Low_complexity 1 28 0 5 721 1673 31 0 0 chr13 17863422 17863614 -102420698 - B2_Mm1t SINE B2 -1 192 1 5 721 368 202 50 69 chr13 17863939 17864040 -102420272 + B1_Mur1 SINE Alu 34 132 -17 5 721 185 132 26 0 chr13 17865008 17865046 -102419266 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 5 721 449 201 0 104 chr13 17865260 17865372 -102418940 + B3 SINE B2 61 169 -47 5 721 871 176 7 7 chr13 17865907 17866056 -102418256 + B1_Mur3 SINE Alu 1 149 0 5 721 228 158 0 0 chr13 17866313 17866370 -102417942 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 721 259 289 257 20 chr13 17866492 17866644 -102417668 + B3 SINE B2 4 191 -25 5 721 849 147 0 0 chr13 17866686 17866815 -102417497 + B3 SINE B2 2 130 -86 5 721 612 178 146 38 chr13 17866936 17867094 -102417218 - URR1A DNA MER1_type -51 175 1 5 721 244 317 103 48 chr13 17867102 17867228 -102417084 - B3A SINE B2 -65 133 1 5 721 349 299 99 21 chr13 17867882 17868073 -102416239 + L1MA4 LINE L1 5689 5894 -406 5 721 694 224 13 20 chr13 17868193 17868343 -102415969 + B1_Mur1 SINE Alu 1 149 0 5 721 338 233 81 11 chr13 17868731 17868818 -102415494 - MLT1D LTR MaLR -16 611 519 5 721 380 340 180 51 chr13 17868840 17869156 -102415156 - MLT1D LTR MaLR -148 357 1 5 721 2534 72 69 11 chr13 17869926 17870097 -102414215 + ORR1C2 LTR MaLR 1 171 -213 5 721 384 22 0 0 chr13 17870097 17870142 -102414170 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 721 2534 72 69 11 chr13 17870142 17870333 -102413979 + ORR1C2 LTR MaLR 172 382 -2 5 721 1378 209 133 3 chr13 17870356 17870731 -102413581 + RCHARR1 DNA MER1_type 489 912 -62 5 721 269 296 11 0 chr13 17870875 17870963 -102413349 + L2 LINE L2 2545 2633 -786 5 721 524 304 55 11 chr13 17871318 17871506 -102412806 + ID_B1 SINE B4 15 214 -10 5 721 21 0 0 0 chr13 17871611 17871632 -102412680 + AT_rich Low_complexity Low_complexity 1 21 0 5 721 1040 293 37 28 chr13 17871831 17872154 -102412158 + ORR1E LTR MaLR 34 359 0 5 721 9849 144 21 13 chr13 17872224 17873953 -102410359 + L1_Mm LINE L1 3776 5517 -366 6 721 214 287 68 25 chr13 17874286 17874404 -102409908 - MIRb SINE MIR -126 142 20 6 721 768 268 59 4 chr13 17874580 17874853 -102409459 + L1M4 LINE L1 4047 4334 -1812 6 721 793 153 14 14 chr13 17874854 17875000 -102409312 + B1_Mus1 SINE Alu 1 146 -2 6 721 630 0 0 0 chr13 17875010 17875080 -102409232 + (GAAA)n Simple_repeat Simple_repeat 4 73 0 6 721 198 0 0 0 chr13 17875442 17875464 -102408848 + (A)n Simple_repeat Simple_repeat 1 22 0 6 721 663 192 0 39 chr13 17876640 17876770 -102407542 + B1_Mur3 SINE Alu 25 149 0 6 721 400 167 472 0 chr13 17877515 17877659 -102406653 + B3 SINE B2 3 214 -2 6 721 3277 247 86 157 chr13 17878755 17878928 -102405384 + L1_Mur3 LINE L1 1244 1425 -4455 6 721 183 42 0 0 chr13 17878928 17878952 -102405360 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 6 721 3277 247 86 157 chr13 17878952 17879628 -102404684 + L1_Mur3 LINE L1 1426 2090 -3790 6 721 243 284 80 35 chr13 17879628 17879741 -102404571 + RLTR25B LTR ERVK 389 506 -522 6 721 570 186 51 42 chr13 17879665 17879783 -102404529 + B1_Mur3 SINE Alu 31 149 0 6 721 3277 247 86 157 chr13 17879783 17881508 -102402804 + L1_Mur3 LINE L1 2091 3789 -2091 6 721 1223 34 0 0 chr13 17881508 17881654 -102402658 + B1_Mm SINE Alu 2 147 0 6 721 3277 247 86 157 chr13 17881654 17881941 -102402371 + L1_Mur3 LINE L1 3790 4044 -1836 6 721 318 208 10 13 chr13 17881947 17882034 -102402278 + L1_Mur3 LINE L1 4151 4242 -1904 6 721 747 52 0 0 chr13 17882123 17882219 -102402093 + (GGGGA)n Simple_repeat Simple_repeat 5 100 0 6 721 692 166 14 45 chr13 17882221 17882361 -102401951 + B1_Mur4 SINE Alu 6 150 0 6 721 1059 50 50 0 chr13 17882435 17882575 -102401737 + B1_Mus1 SINE Alu 2 148 0 6 721 550 245 71 92 chr13 17882585 17882945 -102401367 + L1_Mur3 LINE L1 4457 4818 -1325 6 721 320 168 0 38 chr13 17882968 17883054 -102401258 + B2_Mm2 SINE B2 5 84 -114 6 721 201 94 0 0 chr13 17883089 17883121 -102401191 + (G)n Simple_repeat Simple_repeat 1 32 0 6 721 549 231 133 51 chr13 17883215 17883266 -102401046 + L1_Mur3 LINE L1 5391 5442 -738 6 721 1379 176 212 46 chr13 17883266 17883719 -102400593 + RLTR12B LTR ERVK 1 528 0 6 721 3034 130 88 15 chr13 17883725 17884270 -102400042 - RMER4B LTR ERVK 0 585 1 6 721 549 232 137 52 chr13 17884270 17884507 -102399805 + L1_Mur3 LINE L1 5445 5714 -470 6 721 619 224 6 58 chr13 17884536 17884692 -102399620 - B1_Mur4 SINE Alu -1 149 2 6 721 968 148 100 18 chr13 17884979 17885199 -102399113 - Lx2A1 LINE L1 0 7008 6771 6 721 401 0 20 0 chr13 17885248 17885297 -102399015 + (CATA)n Simple_repeat Simple_repeat 2 51 0 6 721 236 222 119 20 chr13 17885496 17885597 -102398715 + L1MEg LINE L1 1287 1397 -4687 6 721 1909 177 52 19 chr13 17885819 17886244 -102398068 - BGLII_B LTR ERVK 0 441 3 6 721 698 295 103 11 chr13 17886553 17886873 -102397439 + L1MA7 LINE L1 5465 5803 -500 6 721 341 262 219 13 chr13 17886891 17887042 -102397270 + B3A SINE B2 5 186 -12 6 721 258 32 0 0 chr13 17887060 17887091 -102397221 + (TAA)n Simple_repeat Simple_repeat 1 31 0 6 721 212 289 0 0 chr13 17887100 17887152 -102397160 + B3A SINE B2 1 52 -146 6 721 300 252 25 140 chr13 17887203 17887360 -102396952 + L1MA7 LINE L1 5814 5952 -339 6 721 332 247 45 154 chr13 17887390 17887501 -102396811 + L1MA7 LINE L1 5951 6040 -251 6 721 1098 70 28 0 chr13 17887501 17887644 -102396668 + B1_Mus2 SINE Alu 1 147 0 6 721 332 247 45 154 chr13 17887644 17887733 -102396579 + L1MA7 LINE L1 6041 6129 -162 6 721 493 291 6 51 chr13 17887895 17888051 -102396261 + B1F1 SINE Alu 1 149 0 6 721 380 316 115 0 chr13 17888091 17888230 -102396082 + RSINE1 SINE B4 8 162 -3 6 721 865 227 34 5 chr13 17888352 17888560 -102395752 + B3 SINE B2 3 216 0 6 721 577 144 0 56 chr13 17888917 17889042 -102395270 - RMER10B LTR ERVL -53 345 228 6 721 231 88 0 0 chr13 17889213 17889247 -102395065 + (A)n Simple_repeat Simple_repeat 1 34 0 6 721 599 190 26 0 chr13 17889534 17889650 -102394662 - PB1D9 SINE Alu -1 119 1 6 721 1195 129 38 0 chr13 17890259 17890445 -102393867 + B2_Mm1t SINE B2 1 193 0 6 721 1029 64 0 0 chr13 17890688 17890828 -102393484 + B1_Mus1 SINE Alu 9 148 0 6 721 429 167 0 0 chr13 17890828 17890906 -102393406 + A-rich Low_complexity Low_complexity 1 78 0 6 721 663 212 80 0 chr13 17890982 17891119 -102393193 + B1_Mur3 SINE Alu 2 149 0 6 721 183 42 0 0 chr13 17891134 17891158 -102393154 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 6 721 231 270 27 0 chr13 17891778 17891852 -102392460 + ID2 SINE ID 8 83 0 6 721 204 125 0 0 chr13 17891852 17891884 -102392428 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 6 721 678 263 16 39 chr13 17892061 17892243 -102392069 + B3 SINE B2 18 195 -21 6 721 201 74 0 0 chr13 17892281 17892308 -102392004 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 6 721 368 196 39 67 chr13 17892651 17892755 -102391557 + PB1D7 SINE Alu 20 120 0 6 721 223 351 59 11 chr13 17893133 17893250 -102391062 - L2b LINE L2 0 3426 3252 6 721 180 53 0 73 chr13 17893439 17893480 -102390832 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 6 721 22 0 0 0 chr13 17893512 17893534 -102390778 + AT_rich Low_complexity Low_complexity 1 22 0 6 721 277 248 78 10 chr13 17894040 17894142 -102390170 + L2a LINE L2 3308 3416 -10 6 721 180 111 0 0 chr13 17895717 17895744 -102388568 + (CTG)n Simple_repeat Simple_repeat 2 28 0 6 721 26 0 0 0 chr13 17896148 17896174 -102388138 + GC_rich Low_complexity Low_complexity 1 26 0 6 721 274 219 8 16 chr13 17896257 17896378 -102387934 + (CGG)n Simple_repeat Simple_repeat 2 121 0 6 721 249 33 0 0 chr13 17896735 17896765 -102387547 + (CGG)n Simple_repeat Simple_repeat 2 31 0 6 721 961 86 178 6 chr13 17897664 17897827 -102386485 + B2_Mm2 SINE B2 2 192 -3 6 721 231 324 27 73 chr13 17898472 17898582 -102385730 + PB1D10 SINE Alu 1 105 -12 6 721 277 279 36 55 chr13 17899100 17899210 -102385102 + ID_B1 SINE B4 1 108 -116 6 721 262 206 152 0 chr13 17899221 17899313 -102384999 + Charlie1a DNA MER1_type 957 1062 -393 6 721 543 241 126 30 chr13 17899371 17899538 -102384774 + B3 SINE B2 5 187 -8 6 721 410 246 99 38 chr13 17899548 17899679 -102384633 + ID_B1 SINE B4 73 211 -13 6 721 460 167 248 9 chr13 17899777 17899886 -102384426 - B1_Mur4 SINE Alu -1 149 15 6 721 271 329 0 25 chr13 17899950 17900031 -102384281 - PB1D10 SINE Alu -26 91 13 6 721 1167 75 0 0 chr13 17900371 17900517 -102383795 + B1_Mm SINE Alu 2 147 0 6 721 264 149 0 0 chr13 17900542 17900589 -102383723 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 721 212 0 36 0 chr13 17900597 17900625 -102383687 + (GA)n Simple_repeat Simple_repeat 2 30 0 6 721 385 230 31 124 chr13 17901082 17901211 -102383101 + MLT1A0 LTR MaLR 3 119 -246 6 721 1205 75 0 0 chr13 17901211 17901358 -102382954 + B1_Mus2 SINE Alu 1 147 0 6 721 819 0 0 0 chr13 17901433 17901531 -102382781 - U6 snRNA snRNA -9 98 1 6 721 248 136 0 0 chr13 17901586 17901630 -102382682 + PB1D9 SINE Alu 77 120 0 6 721 249 33 0 0 chr13 17901824 17901854 -102382458 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 721 336 312 55 9 chr13 17902024 17902134 -102382178 + PB1D7 SINE Alu 1 115 -5 6 721 843 245 102 19 chr13 17902485 17902748 -102381564 + MTE2b LTR MaLR 93 376 -3 6 721 818 38 0 0 chr13 17902994 17903100 -102381212 - B1_Mus2 SINE Alu 0 147 42 6 721 264 0 0 159 chr13 17903103 17903235 -102381077 + (CTCTG)n Simple_repeat Simple_repeat 5 115 0 6 721 391 68 0 33 chr13 17903236 17903297 -102381015 - PB1D9 SINE Alu -61 59 1 6 721 522 0 0 0 chr13 17903299 17903357 -102380955 + (TTA)n Simple_repeat Simple_repeat 3 60 0 6 721 1047 115 0 0 chr13 17903357 17903514 -102380798 - B2_Mm2 SINE B2 -38 157 1 6 721 32 26 0 0 chr13 17903639 17903678 -102380634 + AT_rich Low_complexity Low_complexity 1 39 0 6 721 22 0 0 0 chr13 17904093 17904115 -102380197 + AT_rich Low_complexity Low_complexity 1 22 0 6 721 585 286 106 53 chr13 17904377 17904717 -102379595 + L1MB7 LINE L1 4845 5202 -944 6 721 1170 56 0 0 chr13 17904720 17904864 -102379448 + B1_Mus2 SINE Alu 4 147 0 6 721 555 199 108 49 chr13 17904944 17905129 -102379183 + B3A SINE B2 3 198 0 6 721 440 275 189 57 chr13 17905249 17905292 -102379020 + L1MB7 LINE L1 5307 5336 -832 6 721 1269 105 5 68 chr13 17905292 17905497 -102378815 + B2_Mm1a SINE B2 1 192 -1 6 721 1001 246 189 14 chr13 17905497 17906026 -102378286 + L1MB7 LINE L1 5336 5961 -281 6 721 2301 239 136 31 chr13 17906143 17906843 -102377469 - Lx8 LINE L1 -74 7399 6627 6 721 1137 245 70 41 chr13 17906843 17907245 -102377067 + MTD LTR MaLR 1 405 -14 6 721 585 0 0 0 chr13 17907346 17907411 -102376901 + (CTG)n Simple_repeat Simple_repeat 2 66 0 6 721 638 130 9 0 chr13 17907409 17907517 -102376795 + (TTC)n Simple_repeat Simple_repeat 1 109 0 6 721 409 245 71 107 chr13 17907541 17907576 -102376736 + MT2A LTR ERVL 391 428 -173 6 721 3407 30 2 5 chr13 17907576 17907973 -102376339 - MTA_Mm LTR MaLR 0 396 1 6 721 441 215 86 35 chr13 17907973 17908106 -102376206 + MT2A LTR ERVL 356 553 -48 6 721 381 75 0 0 chr13 17908114 17908167 -102376145 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 721 971 58 0 48 chr13 17908173 17908319 -102375993 - B1_Mus1 SINE Alu 0 148 10 6 721 1954 162 75 13 chr13 17908422 17908798 -102375514 - MTC LTR MaLR -22 399 1 6 721 448 316 7 0 chr13 17908810 17908946 -102375366 - Lx8 LINE L1 -1146 6327 6191 6 721 1061 228 9 0 chr13 17908962 17909173 -102375139 + B3 SINE B2 4 216 0 6 721 713 247 19 0 chr13 17909175 17909329 -102374983 + B3A SINE B2 1 157 -41 6 721 955 178 81 5 chr13 17909419 17909628 -102374684 - URR1A DNA MER1_type -1 225 1 6 721 1338 142 75 8 chr13 17909639 17909894 -102374418 - ORR1B1 LTR MaLR 0 394 123 6 721 3754 166 84 30 chr13 17909907 17910751 -102373561 - RMER19B LTR ERVK -12 890 1 6 721 493 126 0 22 chr13 17910751 17910840 -102373472 - ORR1B1 LTR MaLR -267 127 41 6 721 924 162 7 7 chr13 17910958 17911107 -102373205 + B1_Mur4 SINE Alu 2 150 0 6 721 1446 79 21 0 chr13 17911584 17911774 -102372538 + B2_Mm2 SINE B2 2 195 0 6 721 4972 128 21 14 chr13 17911797 17912707 -102371605 + L1Md_F2 LINE L1 215 1148 -5576 7 721 16546 57 12 1 chr13 17913608 17915690 -102368622 + L1Md_F2 LINE L1 3482 5586 -297 7 721 7723 55 12 23 chr13 17915690 17916697 -102367615 + L1Md_F2 LINE L1 5587 6582 0 7 721 1065 96 0 0 chr13 17916720 17916855 -102367457 + B1_Mus2 SINE Alu 1 135 -12 7 721 540 0 0 0 chr13 17916855 17916915 -102367397 + (TAAAA)n Simple_repeat Simple_repeat 2 61 0 7 721 1070 129 59 0 chr13 17916919 17917089 -102367223 + B2_Mm2 SINE B2 2 181 -14 7 721 282 155 351 18 chr13 17917136 17917247 -102367065 + B2_Mm2 SINE B2 47 194 -1 7 721 207 0 0 0 chr13 17917746 17917769 -102366543 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 721 1039 286 78 39 chr13 17917773 17918379 -102365933 + L1MC2 LINE L1 5681 6335 -9 7 721 685 342 93 42 chr13 17918767 17919145 -102365167 - Lx8 LINE L1 -250 7223 6827 7 721 1261 200 83 39 chr13 17919159 17919497 -102364815 + ORR1D2 LTR MaLR 5 357 -13 7 721 783 278 59 30 chr13 17919513 17919784 -102364528 - Lx8 LINE L1 -660 6813 6535 7 721 1570 137 4 0 chr13 17919798 17920046 -102364266 + ORR1A2 LTR MaLR 8 256 -71 7 721 241 119 24 0 chr13 17920040 17920082 -102364230 - RLTR16 LTR ERVK -462 43 1 7 721 441 298 0 8 chr13 17920086 17920211 -102364101 - L1M2 LINE L1 -640 5657 5534 7 721 630 238 0 0 chr13 17920266 17920388 -102363924 + B1_Mur1 SINE Alu 1 122 -27 7 721 342 45 0 0 chr13 17920520 17920564 -102363748 + (TTA)n Simple_repeat Simple_repeat 2 45 0 7 721 6860 118 30 27 chr13 17920564 17921678 -102362634 - Lx3C LINE L1 -9 6967 5851 7 721 192 235 32 20 chr13 17922493 17922565 -102361747 - MIRc SINE MIR -126 150 80 7 721 210 171 0 0 chr13 17922742 17922783 -102361529 + CT-rich Low_complexity Low_complexity 3 43 0 7 721 2476 78 14 6 chr13 17923058 17923418 -102360894 - MTA_Mm LTR MaLR -2 394 32 7 721 310 315 98 0 chr13 17923949 17924092 -102360220 - MER3 DNA MER1_type -38 171 15 7 721 297 225 28 14 chr13 17924094 17924166 -102360146 + CT-rich Low_complexity Low_complexity 2 74 0 7 721 368 264 65 9 chr13 17924187 17924294 -102360018 - PB1D10 SINE Alu -1 116 4 7 721 604 310 45 12 chr13 17924579 17924821 -102359491 + RMER15 LTR ERVL 296 545 -30 7 721 1585 320 60 28 chr13 17925022 17925709 -102358603 + RMER15-int LTR ERVL 228 936 -4063 7 721 1254 103 23 0 chr13 17925710 17925885 -102358427 + B2_Mm2 SINE B2 1 179 -16 7 721 392 103 268 57 chr13 17925934 17926057 -102358255 + B2_Mm2 SINE B2 47 195 0 7 721 264 326 61 0 chr13 17926059 17926157 -102358155 + RMER15-int LTR ERVL 923 1026 -3973 7 721 1848 50 0 0 chr13 17926203 17926421 -102357891 - L1Md_F2 LINE L1 -224 5659 5442 7 721 7890 50 2 2 chr13 17926421 17927446 -102356866 + L1Md_F2 LINE L1 5618 6582 0 7 721 894 312 127 83 chr13 17927454 17927985 -102356327 + RMER15-int LTR ERVL 1102 1665 -3334 7 721 1086 79 14 0 chr13 17927985 17928124 -102356188 + B1_Mur4 SINE Alu 1 141 -9 7 721 888 61 0 0 chr13 17928124 17928239 -102356073 + (CAAAA)n Simple_repeat Simple_repeat 2 116 0 7 721 894 312 127 83 chr13 17928239 17928516 -102355796 + RMER15-int LTR ERVL 1666 1946 -3053 7 721 409 240 0 1 chr13 17928556 17928644 -102355668 - PB1D9 SINE Alu -62 87 1 7 721 703 255 19 19 chr13 17929800 17930012 -102354300 - B3 SINE B2 -4 212 1 7 721 320 349 120 0 chr13 17930901 17931076 -102353236 - MIR SINE MIR -52 210 15 7 721 210 208 0 0 chr13 17931111 17931159 -102353153 + (CAT)n Simple_repeat Simple_repeat 3 50 0 7 721 251 128 21 0 chr13 17931411 17931458 -102352854 - ORR1C2 LTR MaLR -336 48 1 7 721 22 0 0 0 chr13 17931883 17931905 -102352407 + AT_rich Low_complexity Low_complexity 1 22 0 7 721 1646 156 56 13 chr13 17932126 17932431 -102351881 + RLTR20A2 LTR ERVK 1 318 -260 7 721 231 36 0 0 chr13 17932620 17932648 -102351664 + (T)n Simple_repeat Simple_repeat 1 28 0 7 721 436 175 47 47 chr13 17932648 17932798 -102351514 - RMER17B LTR ERVK -499 459 310 7 721 495 33 0 0 chr13 17934120 17934181 -102350131 + (TAAA)n Simple_repeat Simple_repeat 1 61 0 7 721 1849 186 192 5 chr13 17934433 17934807 -102349505 - RLTR41 LTR ERV1 0 446 3 7 721 285 250 111 30 chr13 17935074 17935173 -102349139 + Lx7 LINE L1 7089 7195 -501 7 721 1804 122 131 0 chr13 17935182 17935503 -102348809 + ORR1B1 LTR MaLR 1 363 -31 7 721 2494 110 15 234 chr13 17935504 17936170 -102348142 + RLTR28 LTR ERVL 2 521 -3 7 721 467 167 103 55 chr13 17936415 17936561 -102347751 - MLT2B4 LTR ERVL -403 153 1 7 721 1350 201 119 29 chr13 17936615 17936958 -102347354 + ORR1D1 LTR MaLR 1 374 0 7 721 368 215 57 24 chr13 17936968 17937092 -102347220 + L1MA4 LINE L1 5758 5885 -415 7 721 1624 126 34 114 chr13 17937776 17938134 -102346178 - ORR1A4 LTR MaLR 0 329 1 7 721 8433 154 27 93 chr13 17938134 17939391 -102344921 - ORR1A4-int LTR MaLR 0 1792 694 7 721 5138 30 2 0 chr13 17939391 17939984 -102344328 - L1Md_A LINE L1 0 6582 5989 7 721 8433 146 31 93 chr13 17939984 17940858 -102343454 - ORR1A4-int LTR MaLR -1108 855 60 7 721 180 0 0 0 chr13 17940858 17940878 -102343434 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 721 8433 146 31 93 chr13 17940878 17940923 -102343389 - ORR1A4-int LTR MaLR -1904 59 3 7 721 745 76 0 112 chr13 17940923 17941057 -102343255 - ORR1A4 LTR MaLR 0 394 276 7 721 779 262 115 56 chr13 17941060 17941400 -102342912 - RLTR9A LTR ERVK -8 360 1 7 721 1147 176 7 112 chr13 17941400 17941669 -102342643 - ORR1B1 LTR MaLR -113 281 41 7 721 536 282 100 30 chr13 17941893 17942123 -102342189 + Tigger9b DNA MER2_type 1 246 -378 7 721 500 165 0 28 chr13 17942169 17942275 -102342037 - ORR1B1-int LTR MaLR -1247 262 160 7 721 236 275 11 91 chr13 17942481 17942569 -102341743 - RSINE1 SINE B4 0 165 85 7 721 1190 54 0 0 chr13 17942878 17943025 -102341287 + B1_Mus2 SINE Alu 1 147 0 7 721 264 120 0 0 chr13 17943062 17943112 -102341200 + (A)n Simple_repeat Simple_repeat 1 50 0 7 721 393 198 125 9 chr13 17943293 17943405 -102340907 + MER44C DNA MER2_type 75 199 -534 7 721 8042 46 2 0 chr13 17943516 17944470 -102339842 + L1_Mus1 LINE L1 5612 6567 0 7 721 827 42 244 0 chr13 17944474 17944593 -102339719 + B1_Mus1 SINE Alu 1 148 0 7 721 812 264 60 25 chr13 17944614 17944898 -102339414 + MER44C DNA MER2_type 265 558 -175 7 721 1760 223 119 29 chr13 17945002 17945547 -102338765 + RMER19B LTR ERVK 309 902 0 7 721 345 47 0 0 chr13 17945567 17945610 -102338702 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 721 247 266 41 41 chr13 17945642 17945740 -102338572 - PB1D10 SINE Alu -13 104 7 7 721 239 261 33 22 chr13 17945664 17945754 -102338558 - ID_B1 SINE B4 -62 162 72 7 721 180 111 0 0 chr13 17946037 17946064 -102338248 + MER5A DNA MER1_type 37 63 -126 7 721 877 150 79 23 chr13 17946228 17946405 -102337907 + URR1B DNA MER1_type 39 225 0 7 721 287 326 75 0 chr13 17948593 17948740 -102335572 - L1MA9 LINE L1 -169 6143 5986 7 721 228 145 77 26 chr13 17948760 17948838 -102335474 + T-rich Low_complexity Low_complexity 2 83 0 7 721 284 299 88 39 chr13 17948844 17949049 -102335263 + L1M5 LINE L1 5601 5815 -309 7 721 1784 211 70 36 chr13 17949467 17949910 -102334402 - MT2A LTR ERVL -75 458 1 7 721 281 324 29 19 chr13 17950090 17950194 -102334118 + CT-rich Low_complexity Low_complexity 3 107 0 7 721 378 0 0 0 chr13 17950831 17950873 -102333439 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 721 1120 167 146 8 chr13 17951669 17951916 -102332396 - MTD LTR MaLR -14 405 125 7 721 332 306 77 77 chr13 17951954 17952266 -102332046 - RLTR15 LTR ERVK -25 334 23 7 721 317 266 24 24 chr13 17952244 17952371 -102331941 - RLTR12B LTR ERVK -397 131 5 7 721 351 207 46 0 chr13 17952367 17952454 -102331858 - MTD LTR MaLR -279 140 50 7 721 219 259 0 18 chr13 17952760 17952815 -102331497 + CT-rich Low_complexity Low_complexity 5 58 0 7 721 250 167 0 0 chr13 17952818 17952860 -102331452 - PB1 SINE Alu -40 87 46 7 721 5783 152 120 134 chr13 17952990 17953076 -102331236 - L1_Mur3 LINE L1 -2821 3059 2995 7 721 1212 48 7 0 chr13 17953076 17953222 -102331090 - B1_Mus2 SINE Alu 0 147 1 7 721 5783 152 120 134 chr13 17953222 17953788 -102330524 - L1_Mur3 LINE L1 -2886 2994 2421 7 721 245 387 43 0 chr13 17953788 17953881 -102330431 + ID_B1 SINE B4 5 101 -123 7 721 298 352 3 0 chr13 17953881 17953899 -102330413 + ID4 SINE ID 5 116 -36 7 721 5783 152 120 134 chr13 17953899 17954254 -102330058 - L1_Mur3 LINE L1 -2886 2420 2059 7 721 216 0 0 0 chr13 17954254 17954278 -102330034 + (TGG)n Simple_repeat Simple_repeat 1 24 0 7 721 432 0 0 0 chr13 17954279 17954327 -102329985 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 721 5783 152 120 134 chr13 17954327 17954898 -102329414 - L1_Mur3 LINE L1 -3822 2058 1393 7 721 8560 114 50 17 chr13 17954907 17955867 -102328445 - Lx2 LINE L1 -8 6989 5973 7 721 837 30 0 0 chr13 17955867 17955967 -102328345 + (TTC)n Simple_repeat Simple_repeat 2 101 0 7 721 1137 58 0 0 chr13 17955971 17956108 -102328204 - B1_Mus1 SINE Alu -11 137 1 7 721 8560 114 50 17 chr13 17956108 17956474 -102327838 - Lx2 LINE L1 -1025 5972 5615 7 90 4158 155 70 10 chr13 17956471 17957366 -102326946 - L1_Mur3 LINE L1 -4499 1381 423 7 722 6324 81 16 2 chr13 17957360 17958194 -102326118 + Lx LINE L1 5608 6452 -202 7 722 708 12 0 0 chr13 17958222 17958303 -102326009 + (TG)n Simple_repeat Simple_repeat 2 82 0 7 722 880 142 107 6 chr13 17958303 17958480 -102325832 - MTC LTR MaLR -226 195 1 7 722 207 114 0 0 chr13 17958894 17958929 -102325383 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 7 722 354 45 0 0 chr13 17958933 17958977 -102325335 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 722 1127 247 43 23 chr13 17958977 17959016 -102325296 + MTD LTR MaLR 2 40 -379 7 722 1387 74 0 50 chr13 17959016 17959215 -102325097 - B2_Mm2 SINE B2 -5 190 2 7 722 1127 247 43 23 chr13 17959215 17959477 -102324835 + MTD LTR MaLR 41 308 -111 7 722 276 239 42 0 chr13 17959712 17959783 -102324529 + ID4 SINE ID 6 79 -4 7 722 238 247 161 0 chr13 17960083 17960164 -102324148 + PB1D10 SINE Alu 22 115 -2 7 722 850 162 0 14 chr13 17960508 17960646 -102323666 + B1_Mus1 SINE Alu 1 136 -12 7 722 308 270 88 26 chr13 17961291 17961405 -102322907 - MLT1D LTR MaLR -326 179 59 7 722 813 255 181 72 chr13 17961615 17962118 -102322194 + RMER4B LTR ERVK 17 574 -11 7 722 691 285 110 12 chr13 17962163 17962408 -102321904 + B4 SINE B4 3 271 -21 7 722 384 22 0 0 chr13 17962462 17962507 -102321805 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 722 3363 230 83 30 chr13 17962545 17962675 -102321637 + Lx9 LINE L1 6591 6720 -924 7 722 1906 148 73 49 chr13 17962675 17963044 -102321268 - ORR1C1 LTR MaLR 0 378 1 7 722 3363 230 83 30 chr13 17963044 17963790 -102320522 + Lx9 LINE L1 6721 7514 -130 7 722 315 0 0 0 chr13 17963790 17963825 -102320487 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 722 3363 230 83 30 chr13 17963825 17963930 -102320382 + Lx9 LINE L1 7515 7625 -19 7 722 23 68 0 0 chr13 17963932 17963976 -102320336 + AT_rich Low_complexity Low_complexity 1 44 0 7 722 1746 119 30 72 chr13 17964597 17964932 -102319380 - ORR1A4 LTR MaLR -8 321 1 8 722 474 301 51 22 chr13 17965875 17966065 -102318247 + B4A SINE B4 84 292 0 8 722 1849 138 70 4 chr13 17966251 17966571 -102317741 - ORR1B1 LTR MaLR -8 386 58 8 722 7922 170 26 2 chr13 17966572 17968045 -102316267 - ORR1B1-int LTR MaLR 0 1509 1 8 722 2379 131 13 8 chr13 17968049 17968433 -102315879 - ORR1B1 LTR MaLR -8 386 1 8 722 306 0 0 0 chr13 17968494 17968528 -102315784 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 8 722 4696 127 6 3 chr13 17968747 17969465 -102314847 + RMER19A LTR ERVK 1 720 -17 8 722 460 278 172 20 chr13 17969599 17969871 -102314441 - L1MA5 LINE L1 -23 6277 5966 8 722 646 208 78 73 chr13 17970551 17970743 -102313569 + B4 SINE B4 6 198 -94 8 722 712 142 68 38 chr13 17970655 17970787 -102313525 + B1_Mm SINE Alu 11 146 -1 8 722 356 269 270 8 chr13 17971235 17971362 -102312950 + ID_B1 SINE B4 1 159 -65 8 722 183 271 0 78 chr13 17971363 17971427 -102312885 + MIRb SINE MIR 116 174 -94 8 722 24 0 0 0 chr13 17973824 17973848 -102310464 + AT_rich Low_complexity Low_complexity 1 24 0 8 722 930 164 25 115 chr13 17974732 17974967 -102309345 - B3 SINE B2 -1 215 2 8 722 1003 122 0 16 chr13 17975921 17976104 -102308208 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 722 279 0 0 0 chr13 17977713 17977744 -102306568 + (TTA)n Simple_repeat Simple_repeat 3 33 0 8 722 800 100 115 0 chr13 17977752 17977882 -102306430 - B2_Mm1t SINE B2 -47 146 2 8 722 21 0 0 0 chr13 17978249 17978270 -102306042 + AT_rich Low_complexity Low_complexity 1 21 0 8 722 466 290 41 6 chr13 17978486 17978656 -102305656 - Lx7 LINE L1 -395 7301 7126 8 722 291 225 0 78 chr13 17979404 17979481 -102304831 - PB1D9 SINE Alu -5 115 45 8 722 487 217 183 0 chr13 17980053 17980173 -102304139 + RSINE1 SINE B4 1 142 -23 8 722 234 0 0 0 chr13 17980211 17980237 -102304075 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 8 722 1008 245 0 27 chr13 17980580 17980802 -102303510 + B3 SINE B2 1 216 0 8 722 292 271 73 27 chr13 17981510 17981620 -102302692 + MIRb SINE MIR 69 183 -85 8 722 40 107 0 0 chr13 17981992 17982151 -102302161 + AT_rich Low_complexity Low_complexity 1 159 0 8 722 1307 102 48 0 chr13 17982188 17982374 -102301938 - B2_Mm2 SINE B2 0 195 1 8 722 279 324 9 44 chr13 17982385 17982498 -102301814 - PB1D10 SINE Alu -7 110 2 8 722 415 276 23 30 chr13 17982525 17982656 -102301656 + RSINE1 SINE B4 3 132 -33 8 722 677 222 148 0 chr13 17983305 17983481 -102300831 + B3 SINE B2 1 202 -14 8 722 459 0 0 0 chr13 17985654 17985705 -102298607 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 722 935 149 37 0 chr13 17985854 17986015 -102298297 - URR1B DNA MER1_type 0 225 59 8 722 772 211 196 22 chr13 17986152 17986336 -102297976 + B3 SINE B2 1 216 0 8 722 1065 145 0 0 chr13 17986501 17986680 -102297632 + (GA)n Simple_repeat Simple_repeat 2 180 0 8 722 353 292 9 19 chr13 17988342 17988450 -102295862 + PB1D7 SINE Alu 5 111 -9 8 722 407 219 63 63 chr13 17990488 17990615 -102293697 + Lx7 LINE L1 6926 7052 -644 8 722 7260 63 63 1 chr13 17990625 17992197 -102292115 + L1_Mus1 LINE L1 4875 6565 -2 8 722 436 230 62 0 chr13 17992317 17992430 -102291882 - URR1A DNA MER1_type -23 203 84 8 722 1428 123 26 0 chr13 17993275 17993502 -102290810 - Lx2 LINE L1 0 6997 6765 8 722 6858 108 45 6 chr13 17993488 17994510 -102289802 - Lx2 LINE L1 -349 6648 5587 8 722 6557 68 16 12 chr13 17994529 17995897 -102288415 - L1VL4 LINE L1 -1795 1764 182 8 722 608 243 99 11 chr13 17996455 17996646 -102287666 - L1ME2 LINE L1 -230 5934 5727 8 722 387 298 170 15 chr13 17996657 17996981 -102287331 + L1MC LINE L1 4860 5233 -913 8 722 478 256 35 42 chr13 17997273 17997416 -102286896 + B4A SINE B4 4 145 -147 8 722 1158 202 144 9 chr13 17998243 17998562 -102285750 + ORR1D1 LTR MaLR 5 366 -8 8 722 5868 186 94 22 chr13 17998565 17999843 -102284469 + ORR1D1-int LTR MaLR 1 1370 0 8 722 542 157 10 0 chr13 17999844 17999946 -102284366 + ORR1D1 LTR MaLR 5 107 -267 8 722 249 157 19 56 chr13 17999946 18000000 -102284312 + ORR1D1 LTR MaLR 307 358 -12 8 722 439 304 68 19 chr13 18000543 18000704 -102283608 + MLT1F1 LTR MaLR 396 564 -5 1 722 195 42 0 0 chr13 18001140 18001164 -102283148 + (T)n Simple_repeat Simple_repeat 1 24 0 2 722 1301 48 0 0 chr13 18001164 18001311 -102283001 - B1_Mus1 SINE Alu 0 148 2 3 722 360 254 138 17 chr13 18001487 18001603 -102282709 - MER58A DNA MER1_type -69 155 26 4 722 200 330 59 8 chr13 18001634 18001753 -102282559 + L2a LINE L2 1645 1769 -1650 5 722 894 134 40 40 chr13 18001766 18001914 -102282398 - B1_Mus1 SINE Alu 0 148 1 6 722 285 336 66 0 chr13 18001991 18002113 -102282199 + L2a LINE L2 1986 2115 -1304 5 722 810 260 31 15 chr13 18002124 18002164 -102282148 - B3A SINE B2 0 198 154 7 722 336 24 0 0 chr13 18002164 18002205 -102282107 + (GA)n Simple_repeat Simple_repeat 1 41 0 8 722 360 0 0 0 chr13 18002205 18002244 -102282068 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 722 810 260 31 15 chr13 18002244 18002397 -102281915 - B3A SINE B2 -45 153 2 7 722 614 271 84 43 chr13 18002566 18002895 -102281417 - MLT1A0 LTR MaLR -13 395 6 1 722 327 272 98 60 chr13 18002926 18003141 -102281171 + L2a LINE L2 2343 2565 -854 5 722 249 330 48 0 chr13 18003320 18003423 -102280889 + L2a LINE L2 3304 3411 -15 5 722 252 0 0 0 chr13 18003425 18003453 -102280859 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1 722 186 194 48 0 chr13 18003503 18003565 -102280747 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 722 552 261 15 23 chr13 18003814 18003947 -102280365 - RSINE1 SINE B4 -31 134 3 1 722 225 0 0 0 chr13 18004142 18004167 -102280145 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 722 917 306 111 6 chr13 18004196 18004521 -102279791 - MLT1A0 LTR MaLR -6 359 1 1 722 197 262 0 0 chr13 18004527 18004569 -102279743 - MIRm SINE MIR -175 101 60 1 722 1088 264 46 14 chr13 18005317 18005601 -102278711 - MLT1F LTR MaLR -255 293 1 1 722 1090 237 111 35 chr13 18005680 18006043 -102278269 + MTE2b LTR MaLR 3 379 0 1 722 275 49 48 32 chr13 18006371 18006434 -102277878 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 1 722 876 207 0 0 chr13 18007969 18008109 -102276203 - B1_Mur4 SINE Alu -9 141 2 2 722 221 57 29 0 chr13 18008279 18008314 -102275998 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 2 722 39201 11 2 7 chr13 18008781 18014590 -102269722 + L1Md_A LINE L1 1 5586 -297 2 722 9367 16 0 0 chr13 18014590 18015586 -102268726 + L1Md_A LINE L1 5587 6582 0 2 722 216 0 0 0 chr13 18015605 18015629 -102268683 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 722 450 0 0 0 chr13 18015629 18015678 -102268634 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 722 183 42 0 0 chr13 18016346 18016370 -102267942 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 722 1294 41 0 0 chr13 18016370 18016515 -102267797 - B1_Mus1 SINE Alu -2 146 2 2 722 457 230 30 42 chr13 18017265 18017433 -102266879 + L1ME1 LINE L1 5265 5430 -749 2 722 620 232 64 0 chr13 18017442 18017567 -102266745 + ID_B1 SINE B4 2 134 -90 2 722 1239 266 34 56 chr13 18017591 18018185 -102266127 + L1ME1 LINE L1 5431 6014 -164 2 722 491 269 38 8 chr13 18018213 18018344 -102265968 + B4 SINE B4 3 137 -155 2 722 222 191 0 0 chr13 18018962 18019004 -102265308 + ID4_ SINE ID 36 77 -6 3 722 352 292 62 0 chr13 18019182 18019295 -102265017 - PB1D9 SINE Alu 0 120 1 3 722 405 198 27 0 chr13 18019322 18019433 -102264879 + (TCTA)n Simple_repeat Simple_repeat 1 114 0 3 722 682 294 33 0 chr13 18019450 18019603 -102264709 - RSINE1 SINE B4 -4 161 4 3 722 1689 169 134 42 chr13 18019742 18020047 -102264265 + ORR1B1 LTR MaLR 3 348 -46 3 722 1129 69 188 0 chr13 18020047 18020207 -102264105 + B2_Mm2 SINE B2 3 192 -3 3 722 1689 169 134 42 chr13 18020207 18020260 -102264052 + ORR1B1 LTR MaLR 349 394 0 3 722 784 293 16 16 chr13 18020510 18020694 -102263618 + B3 SINE B2 1 184 -32 3 722 428 278 36 48 chr13 18020871 18021090 -102263222 + RMER20A LTR ERVK 234 434 -193 3 722 507 266 134 33 chr13 18021586 18021924 -102262388 + L1MB7 LINE L1 5715 6103 -81 3 722 200 35 35 0 chr13 18021978 18022007 -102262305 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 3 722 1166 67 0 0 chr13 18022007 18022142 -102262170 - B1_Mus1 SINE Alu -13 135 1 4 722 195 114 0 0 chr13 18022230 18022265 -102262047 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 4 722 212 235 176 0 chr13 18022622 18022690 -102261622 + PB1D9 SINE Alu 1 80 -40 4 722 447 141 0 0 chr13 18022722 18022800 -102261512 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 4 722 555 288 29 70 chr13 18023285 18023457 -102260855 + ID_B1 SINE B4 11 175 -49 4 722 236 301 108 0 chr13 18023387 18023470 -102260842 + B1F SINE Alu 22 113 -36 4 722 4704 14 0 0 chr13 18023919 18024412 -102259900 + MT2_Mm LTR ERVL 1 493 0 4 722 41325 16 14 0 chr13 18024412 18029699 -102254613 + MERVL-int LTR ERVL 1 5360 -125 4 722 387 167 46 35 chr13 18029699 18029786 -102254526 + ORR1A3-int LTR MaLR 553 640 -1323 4 722 322 0 0 0 chr13 18029786 18029824 -102254488 + MERVL-int LTR ERVL 5448 5485 0 4 722 4665 14 2 0 chr13 18029824 18030316 -102253996 + MT2_Mm LTR ERVL 1 493 0 4 722 543 299 219 49 chr13 18030460 18031078 -102253234 + L1M5 LINE L1 4112 4815 -1331 4 722 255 122 0 0 chr13 18031819 18031868 -102252444 + (A)n Simple_repeat Simple_repeat 1 49 0 4 722 732 127 126 8 chr13 18032636 18032763 -102251549 + B1_Mur4 SINE Alu 1 142 -8 5 722 22 0 0 0 chr13 18032775 18032797 -102251515 + AT_rich Low_complexity Low_complexity 1 22 0 5 722 180 0 0 0 chr13 18035626 18035646 -102248666 + (CGG)n Simple_repeat Simple_repeat 3 22 0 5 722 28 79 0 0 chr13 18035778 18035841 -102248471 + GC_rich Low_complexity Low_complexity 1 63 0 5 722 197 31 0 86 chr13 18035951 18035986 -102248326 + (CGG)n Simple_repeat Simple_repeat 2 33 0 5 722 23 33 0 0 chr13 18036066 18036096 -102248216 + GC_rich Low_complexity Low_complexity 1 30 0 5 722 325 259 80 106 chr13 18037337 18037488 -102246824 - B1_Mus2 SINE Alu 0 147 1 5 722 556 286 46 17 chr13 18037488 18037556 -102246756 - ID SINE ID -144 80 8 5 722 550 282 48 0 chr13 18039015 18039139 -102245173 + ID_B1 SINE B4 80 209 -15 5 722 1440 217 83 3 chr13 18039983 18040307 -102244005 + MTD LTR MaLR 12 361 -58 5 722 1432 227 80 25 chr13 18040308 18040461 -102243851 + ORR1C2 LTR MaLR 1 168 -216 6 722 2650 171 54 10 chr13 18040461 18040548 -102243764 - RLTR16 LTR ERVK 0 505 415 6 722 378 0 0 0 chr13 18040548 18040590 -102243722 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 722 2650 171 54 10 chr13 18040590 18040986 -102243326 - RLTR16 LTR ERVK -91 414 2 6 722 1432 227 80 25 chr13 18040986 18041194 -102243118 + ORR1C2 LTR MaLR 169 381 -3 6 722 664 139 9 0 chr13 18041648 18041756 -102242556 + B1_Mus1 SINE Alu 2 110 -38 6 722 3160 269 150 11 chr13 18043327 18044467 -102239845 - Lx8 LINE L1 -59 7414 6118 6 722 185 257 68 54 chr13 18044634 18044708 -102239604 + L2 LINE L2 2388 2462 -957 6 722 444 242 197 0 chr13 18045871 18046003 -102238309 + MLT2C1 LTR ERVL 1 158 -239 6 722 205 81 47 31 chr13 18046174 18046238 -102238074 + (TTTG)n Simple_repeat Simple_repeat 4 68 0 6 722 23 0 0 0 chr13 18046612 18046635 -102237677 + AT_rich Low_complexity Low_complexity 1 23 0 6 722 213 279 89 0 chr13 18047291 18047370 -102236942 - PB1D10 SINE Alu -1 116 31 6 722 473 258 53 69 chr13 18047489 18047793 -102236519 - RLTR15 LTR ERVK -16 343 45 7 722 530 183 9 0 chr13 18047953 18048068 -102236244 + GA-rich Low_complexity Low_complexity 2 117 0 7 722 303 333 69 48 chr13 18048068 18048213 -102236099 - MLT2D LTR ERVL -139 275 128 7 722 212 179 0 0 chr13 18048214 18048253 -102236059 + T-rich Low_complexity Low_complexity 1 39 0 7 722 4023 105 34 7 chr13 18048264 18048829 -102235483 - L1Md_F2 LINE L1 -10 6572 5993 7 722 1738 236 233 55 chr13 18049662 18050297 -102234015 - Lx8 LINE L1 -693 6780 6033 7 722 1476 303 121 60 chr13 18050349 18051016 -102233296 + MTE2b-int LTR MaLR 394 1101 -479 7 722 482 248 24 40 chr13 18050913 18051039 -102233273 - MTEa LTR MaLR -73 306 183 7 722 861 250 19 37 chr13 18051057 18051327 -102232985 + MTE2b-int LTR MaLR 1314 1578 -2 7 722 305 238 12 0 chr13 18051337 18051417 -102232895 + MTE2b LTR MaLR 9 89 -290 7 722 387 0 0 0 chr13 18051424 18051467 -102232845 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 722 335 286 0 98 chr13 18051473 18051605 -102232707 + MTE2b LTR MaLR 233 351 -28 7 722 225 0 0 0 chr13 18051785 18051810 -102232502 + (A)n Simple_repeat Simple_repeat 1 25 0 7 722 239 204 19 0 chr13 18053342 18053396 -102230916 + MTE2b LTR MaLR 321 375 -4 7 722 516 226 19 9 chr13 18053659 18053766 -102230546 + PB1D10 SINE Alu 10 117 0 8 722 566 190 53 90 chr13 18053926 18054060 -102230252 - MLT1C LTR MaLR 0 505 347 8 722 423 0 0 0 chr13 18054089 18054136 -102230176 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 722 634 296 7 27 chr13 18054141 18054287 -102230025 - RSINE1 SINE B4 -8 157 15 8 722 545 271 236 4 chr13 18054318 18054564 -102229748 - MLT1C LTR MaLR -160 307 5 8 722 192 362 74 11 chr13 18054622 18054717 -102229595 - L2a LINE L2 -27 3399 3299 8 722 213 261 159 0 chr13 18054870 18054939 -102229373 - MIRb SINE MIR -74 194 115 8 722 232 324 0 0 chr13 18055257 18055325 -102228987 + ID4_ SINE ID 5 72 -11 8 722 648 178 44 7 chr13 18056071 18056207 -102228105 - Lx7 LINE L1 0 7696 7556 8 722 8473 54 1 1 chr13 18056207 18057234 -102227078 - L1Md_F2 LINE L1 -83 5800 4774 8 722 6840 50 2 0 chr13 18057234 18058030 -102226282 + L1Md_F2 LINE L1 5784 6581 -1 8 722 5507 211 64 29 chr13 18058030 18058245 -102226067 - Lx7 LINE L1 -132 7564 7363 8 722 243 0 0 0 chr13 18058245 18058272 -102226040 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 8 722 5507 211 64 29 chr13 18058272 18059019 -102225293 - Lx7 LINE L1 -334 7362 6587 8 722 3204 155 153 13 chr13 18059019 18059555 -102224757 + RMER19C LTR ERVK 1 611 0 9 722 5507 211 64 29 chr13 18059555 18059823 -102224489 - Lx7 LINE L1 -1110 6586 6291 8 722 226 323 0 0 chr13 18060008 18060070 -102224242 - L2a LINE L2 0 3426 3365 9 722 844 243 86 14 chr13 18060588 18060797 -102223515 - ID_B1 SINE B4 0 224 1 9 722 216 86 0 0 chr13 18060807 18060842 -102223470 + (T)n Simple_repeat Simple_repeat 1 35 0 9 722 3738 205 135 33 chr13 18061233 18061480 -102222832 - L1_Rod LINE L1 -1658 4189 3934 9 722 2053 96 31 22 chr13 18061480 18061799 -102222513 - RLTRETN_Mm LTR ERVK 0 322 1 9 722 3738 205 135 33 chr13 18061799 18062709 -102221603 - L1_Rod LINE L1 -1914 3933 2915 9 722 433 187 37 0 chr13 18062714 18062821 -102221491 + CT-rich Low_complexity Low_complexity 5 115 0 9 722 535 237 25 32 chr13 18062822 18062979 -102221333 - L1_Rod LINE L1 -2943 2904 2749 9 722 1193 101 0 0 chr13 18063009 18063157 -102221155 - B1_Mus1 SINE Alu 0 148 1 9 722 944 251 49 5 chr13 18063164 18063368 -102220944 - B3 SINE B2 -3 213 1 9 722 25 65 0 0 chr13 18063368 18063414 -102220898 + AT_rich Low_complexity Low_complexity 1 46 0 9 722 333 0 0 0 chr13 18063484 18063521 -102220791 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 722 1939 156 38 46 chr13 18063584 18063943 -102220369 + RMER1B Other Other 696 1052 -14 1 722 1548 72 0 10 chr13 18063943 18064138 -102220174 + B2_Mm2 SINE B2 1 193 -2 1 722 242 300 62 26 chr13 18064194 18064307 -102220005 + L1MEg LINE L1 339 455 -5917 1 722 367 232 130 0 chr13 18064722 18064838 -102219474 + L1MEg LINE L1 1368 1487 -4991 1 722 1452 255 185 18 chr13 18065119 18065826 -102218486 + L1MC1 LINE L1 5492 6316 -17 1 722 367 256 0 107 chr13 18065837 18065968 -102218344 + ID_B1 SINE B4 107 223 -1 1 722 469 296 5 105 chr13 18065989 18066188 -102218124 + B3A SINE B2 2 182 -16 1 722 261 0 0 0 chr13 18066188 18066217 -102218095 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 722 375 23 0 0 chr13 18066217 18066260 -102218052 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 722 469 296 5 105 chr13 18066260 18066278 -102218034 + B3A SINE B2 183 197 -1 1 722 21 0 0 0 chr13 18066349 18066370 -102217942 + AT_rich Low_complexity Low_complexity 1 21 0 1 722 272 284 110 15 chr13 18066531 18066667 -102217645 + MLT1B LTR MaLR 28 176 -214 1 722 261 0 0 0 chr13 18066708 18066737 -102217575 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 722 413 267 22 0 chr13 18066738 18066828 -102217484 - RSINE1 SINE B4 -7 158 67 1 722 219 132 0 50 chr13 18066815 18066855 -102217457 + RSINE1 SINE B4 22 59 -106 1 722 376 270 84 35 chr13 18066877 18067019 -102217293 + MLT1B LTR MaLR 234 382 -8 1 722 261 0 0 0 chr13 18067101 18067130 -102217182 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 1 722 450 307 163 0 chr13 18067391 18067544 -102216768 + B3A SINE B2 2 179 -19 1 722 217 173 0 19 chr13 18068512 18068565 -102215747 + T-rich Low_complexity Low_complexity 2 53 0 1 722 454 288 89 37 chr13 18068969 18069160 -102215152 + RMER5 LTR ERV1 84 284 -250 1 722 182 234 101 72 chr13 18069171 18069240 -102215072 + L2 LINE L2 459 529 -2890 1 722 198 91 0 0 chr13 18069976 18070009 -102214303 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 722 495 48 0 0 chr13 18070009 18070071 -102214241 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 722 769 181 0 28 chr13 18070160 18070302 -102214010 - ORR1C1 LTR MaLR -239 139 2 1 722 2374 297 86 42 chr13 18070303 18071412 -102212900 + Lx8 LINE L1 6186 7342 -131 1 722 1603 172 154 6 chr13 18071915 18072265 -102212047 - MTD LTR MaLR -8 411 10 1 722 275 252 30 3 chr13 18072514 18072594 -102211718 - PB1D10 SINE Alu -64 84 5 1 722 240 286 0 54 chr13 18072877 18072951 -102211361 - PB1D10 SINE Alu -5 112 43 1 722 25 65 0 0 chr13 18073178 18073224 -102211088 + AT_rich Low_complexity Low_complexity 1 46 0 1 722 2325 47 7 14 chr13 18073224 18073503 -102210809 - L1_Mus1 LINE L1 0 6567 6291 1 722 2341 118 133 17 chr13 18073531 18073944 -102210368 + RMER6B LTR ERVK 1 461 0 1 722 630 239 78 0 chr13 18074456 18074598 -102209714 + RSINE1 SINE B4 2 154 -11 1 722 497 288 111 72 chr13 18075448 18075628 -102208684 - B3A SINE B2 -11 187 1 1 722 891 291 221 90 chr13 18075915 18076395 -102207917 + MT2A LTR ERVL 1 543 -11 1 722 386 274 137 56 chr13 18076517 18076714 -102207598 + MIR SINE MIR 18 230 -32 1 722 23 86 0 0 chr13 18076857 18076915 -102207397 + AT_rich Low_complexity Low_complexity 1 58 0 1 722 370 244 12 37 chr13 18076922 18077003 -102207309 - ID4 SINE ID -3 80 2 1 722 783 249 18 0 chr13 18077148 18077317 -102206995 - B3 SINE B2 -40 176 5 1 722 345 261 92 10 chr13 18077588 18077704 -102206608 + PB1D10 SINE Alu 1 129 -20 1 722 773 212 182 10 chr13 18079329 18079713 -102204599 - RLTR11A LTR ERVK 0 528 41 1 722 230 225 0 0 chr13 18079790 18079830 -102204482 - B3A SINE B2 -157 41 2 1 722 23 33 0 0 chr13 18081854 18081884 -102202428 + AT_rich Low_complexity Low_complexity 1 30 0 1 722 646 99 0 42 chr13 18081884 18081979 -102202333 - B2_Mm2 SINE B2 -104 91 1 1 722 22 35 0 0 chr13 18082393 18082422 -102201890 + AT_rich Low_complexity Low_complexity 1 29 0 1 722 268 171 63 3 chr13 18082473 18082551 -102201761 - ID4_ SINE ID -62 90 7 1 722 1630 63 0 0 chr13 18083170 18083359 -102200953 - B2_Mm1a SINE B2 -4 189 1 1 722 218 277 189 11 chr13 18083775 18083870 -102200442 - PB1D10 SINE Alu 0 117 6 1 722 398 270 0 11 chr13 18084363 18084453 -102199859 - RSINE1 SINE B4 -35 130 42 1 722 463 196 149 0 chr13 18086091 18086191 -102198121 + RSINE1 SINE B4 9 124 -41 1 722 270 0 0 0 chr13 18086191 18086221 -102198091 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 722 800 263 0 79 chr13 18086286 18086501 -102197811 + B3A SINE B2 1 198 0 1 722 622 264 76 0 chr13 18086567 18086711 -102197601 - ID_B1 SINE B4 -64 160 6 1 722 731 329 48 8 chr13 18086758 18087009 -102197303 + B4 SINE B4 13 273 -19 1 722 369 0 0 0 chr13 18087061 18087102 -102197210 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 722 3481 143 28 42 chr13 18087163 18087738 -102196574 - RMER2 LTR ERV1 0 567 1 1 722 757 179 159 20 chr13 18087740 18087773 -102196539 - RCHARR1 DNA MER1_type -25 949 915 1 90 1382 125 294 147 chr13 18087773 18088175 -102196137 + RMER6B LTR ERVK 1 461 0 1 723 757 179 159 20 chr13 18088175 18088386 -102195926 - RCHARR1 DNA MER1_type -60 914 671 1 723 1435 257 68 40 chr13 18088412 18088865 -102195447 - RCHARR1 DNA MER1_type -476 498 33 1 723 237 128 0 0 chr13 18088878 18088925 -102195387 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 723 820 242 136 39 chr13 18088992 18089250 -102195062 - B4A SINE B4 -6 286 4 1 723 244 236 17 0 chr13 18089263 18089327 -102194985 - L1M4 LINE L1 -863 5283 5219 1 723 273 388 114 20 chr13 18089381 18089636 -102194676 - LTR16B LTR ERVL -81 382 104 1 723 342 0 0 0 chr13 18090610 18090648 -102193664 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 723 13294 104 7 2 chr13 18091438 18091779 -102192533 - Lx LINE L1 -447 6207 5857 1 723 213 39 0 0 chr13 18091779 18091805 -102192507 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1 723 13294 153 9 20 chr13 18091805 18094093 -102190219 - Lx LINE L1 -21 5856 3593 1 723 4743 8 2 0 chr13 18094095 18094587 -102189725 - MT2_Mm LTR ERVL 0 493 1 1 723 322 0 0 0 chr13 18094587 18094625 -102189687 - MERVL_2A-int LTR ERVL 0 5485 5448 1 723 387 167 46 35 chr13 18094625 18094712 -102189600 - ORR1A3-int LTR MaLR -1323 640 553 1 723 29134 78 19 11 chr13 18094719 18099985 -102184327 - MERVL_2A-int LTR ERVL -308 5453 1 1 723 4743 8 2 0 chr13 18099985 18100477 -102183835 - MT2_Mm LTR ERVL 0 493 1 1 723 5872 93 23 0 chr13 18100478 18101335 -102182977 - MusHAL1 LINE L1 -309 2403 1527 1 723 1038 164 107 13 chr13 18101337 18101377 -102182935 + RMER17C LTR ERVK 155 215 -195 1 723 462 36 0 0 chr13 18101377 18101433 -102182879 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 723 1038 164 107 13 chr13 18101433 18101626 -102182686 + RMER17C LTR ERVK 216 410 0 1 723 642 195 141 0 chr13 18101812 18101940 -102182372 - B1_Mus1 SINE Alu -2 146 1 1 723 973 192 86 25 chr13 18101969 18102167 -102182145 - B3 SINE B2 -1 215 6 1 723 188 289 19 0 chr13 18102598 18102650 -102181662 + L2a LINE L2 3279 3331 -95 1 723 380 258 10 41 chr13 18103670 18103767 -102180545 + B3A SINE B2 2 95 -103 1 723 194 405 71 13 chr13 18103873 18104028 -102180284 + MIRb SINE MIR 52 215 -53 1 723 1917 171 26 55 chr13 18104062 18104446 -102179866 - ORR1D1 LTR MaLR -1 373 1 1 723 860 343 76 63 chr13 18107056 18107662 -102176650 - MER21B LTR ERV1 -123 740 127 1 723 201 74 0 0 chr13 18107737 18107764 -102176548 + (CTA)n Simple_repeat Simple_repeat 3 29 0 1 723 201 391 9 9 chr13 18108578 18108689 -102175623 - MIRb SINE MIR -64 204 94 1 723 356 158 0 0 chr13 18108949 18109006 -102175306 + HAL1-3A_ME LINE L1 1962 2018 -840 1 723 324 252 0 0 chr13 18109006 18109113 -102175199 + (CA)n Simple_repeat Simple_repeat 1 107 0 1 723 256 304 35 9 chr13 18109591 18109707 -102174605 + PB1D7 SINE Alu 2 120 0 1 723 378 0 0 0 chr13 18109715 18109757 -102174555 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 1 723 597 196 0 36 chr13 18109787 18109898 -102174414 + PB1 SINE Alu 6 112 -15 1 723 8539 37 4 0 chr13 18109903 18111288 -102173024 - L1Md_F2 LINE L1 0 6582 5192 1 723 387 0 0 0 chr13 18111295 18111338 -102172974 + (TAGA)n Simple_repeat Simple_repeat 1 43 0 1 723 201 184 20 0 chr13 18113074 18113123 -102171189 + A-rich Low_complexity Low_complexity 2 51 0 1 723 522 203 22 109 chr13 18113127 18113265 -102171047 - B1F SINE Alu -19 130 5 1 723 333 282 76 90 chr13 18113423 18113567 -102170745 - MER3 DNA MER1_type -1 208 67 1 723 240 337 0 0 chr13 18113767 18113856 -102170456 + GA-rich Low_complexity Low_complexity 1 89 0 1 723 888 268 101 80 chr13 18114373 18114475 -102169837 + MER2 DNA MER2_type 1 115 -230 1 723 557 219 67 0 chr13 18114475 18114580 -102169732 - PB1D10 SINE Alu -5 112 1 1 723 888 268 101 80 chr13 18114580 18114814 -102169498 + MER2 DNA MER2_type 116 344 -1 1 723 263 330 101 0 chr13 18114840 18114949 -102169363 + L2c LINE L2 3256 3375 -12 1 723 728 299 31 40 chr13 18114954 18115177 -102169135 - ID_B1 SINE B4 -2 222 2 1 723 8117 67 5 1 chr13 18115199 18116227 -102168085 + L1_Mus3 LINE L1 5606 6637 -1 1 723 822 73 0 0 chr13 18118465 18118575 -102165737 + (TTTC)n Simple_repeat Simple_repeat 3 112 0 1 723 858 183 0 0 chr13 18118576 18118745 -102165567 + CT-rich Low_complexity Low_complexity 1 169 0 1 723 1314 34 0 0 chr13 18118745 18118891 -102165421 - B1_Mm SINE Alu -1 146 1 1 723 4583 197 67 38 chr13 18119004 18120017 -102164295 - Lx5 LINE L1 -5 7045 6003 1 723 225 0 0 0 chr13 18120044 18120069 -102164243 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1 723 621 246 117 27 chr13 18120084 18120272 -102164040 - B3 SINE B2 -11 205 1 1 723 1370 310 83 50 chr13 18120382 18121018 -102163294 - Lx8 LINE L1 -248 7225 6569 1 723 389 253 31 21 chr13 18121213 18121310 -102163002 + U6 snRNA snRNA 4 101 -6 1 723 469 300 51 51 chr13 18121392 18121550 -102162762 + RSINE1 SINE B4 8 165 0 2 723 365 348 115 39 chr13 18121802 18122062 -102162250 - MER21B LTR ERV1 -583 280 1 2 723 266 375 167 39 chr13 18124148 18124381 -102159931 + MER115 DNA Tip100 56 318 -375 2 723 388 328 105 37 chr13 18125049 18125239 -102159073 + FordPrefect_a DNA Tip100 285 487 -21 2 723 218 233 52 52 chr13 18125452 18125524 -102158788 + MIRc SINE MIR 82 154 -114 2 723 695 251 126 0 chr13 18125524 18125707 -102158605 + B3 SINE B2 1 206 -10 2 723 219 36 0 0 chr13 18125911 18125939 -102158373 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 2 723 224 269 0 0 chr13 18125955 18126007 -102158305 + (CATG)n Simple_repeat Simple_repeat 3 54 0 2 723 280 356 17 17 chr13 18126012 18126129 -102158183 - B4A SINE B4 -35 257 141 2 723 294 280 13 13 chr13 18126150 18126226 -102158086 - B4A SINE B4 -213 79 4 2 723 369 0 0 0 chr13 18127052 18127093 -102157219 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 723 23 0 0 0 chr13 18127251 18127274 -102157038 + AT_rich Low_complexity Low_complexity 1 23 0 2 723 271 308 0 0 chr13 18127699 18127764 -102156548 + ID4_ SINE ID 1 65 -18 2 723 2290 101 6 0 chr13 18127887 18128233 -102156079 - MusHAL1 LINE L1 -1986 726 379 2 723 2628 198 123 5 chr13 18128226 18128850 -102155462 - L1VL2 LINE L1 -5557 778 81 2 723 552 271 0 25 chr13 18128851 18128972 -102155340 - PB1 SINE Alu -2 125 8 2 723 269 336 0 135 chr13 18128870 18129011 -102155301 - ID_B1 SINE B4 -45 179 58 2 723 4893 217 120 13 chr13 18129011 18130349 -102153963 + L1_Rod LINE L1 1494 2974 -2873 2 723 4145 257 59 112 chr13 18131520 18131868 -102152444 + L1_Rod LINE L1 3016 3349 -2498 2 723 793 184 43 0 chr13 18131868 18132009 -102152303 + B1_Mus1 SINE Alu 1 147 -1 2 723 4145 257 59 112 chr13 18132009 18132495 -102151817 + L1_Rod LINE L1 3350 3795 -2052 2 723 4390 139 34 21 chr13 18132495 18133176 -102151136 + RLTR17 LTR ERVK 3 692 0 2 723 4145 257 59 112 chr13 18133176 18134448 -102149864 + L1_Rod LINE L1 3796 4976 -871 2 723 336 24 0 0 chr13 18134448 18134489 -102149823 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 723 4145 257 59 112 chr13 18134489 18134818 -102149494 + L1_Rod LINE L1 4977 5322 -525 2 723 540 116 0 0 chr13 18134906 18135001 -102149311 + (CA)n Simple_repeat Simple_repeat 2 96 0 2 723 1461 70 21 21 chr13 18135632 18135821 -102148491 - B2_Mm2 SINE B2 -4 191 3 2 723 828 0 0 0 chr13 18135821 18135913 -102148399 + (TTC)n Simple_repeat Simple_repeat 3 94 0 2 723 890 273 89 11 chr13 18135915 18136196 -102148116 - Lx6 LINE L1 -16 7444 7142 2 723 459 0 0 0 chr13 18136198 18136249 -102148063 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 723 288 0 0 0 chr13 18136250 18136282 -102148030 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 723 313 291 55 41 chr13 18136336 18136513 -102147799 - L1M3 LINE L1 -532 5642 5469 2 723 224 176 0 0 chr13 18136519 18136553 -102147759 - PB1D10 SINE Alu -31 86 53 2 723 681 253 56 98 chr13 18136567 18136782 -102147530 - ID_B1 SINE B4 -2 222 17 2 723 731 183 29 10 chr13 18136811 18136940 -102147372 - L1M3 LINE L1 -732 5436 5278 2 723 290 311 150 81 chr13 18136940 18137197 -102147115 + B4A SINE B4 1 279 -13 2 723 450 0 0 0 chr13 18137197 18137247 -102147065 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 723 290 311 150 81 chr13 18137247 18137262 -102147050 + B4A SINE B4 280 292 0 2 723 731 198 147 23 chr13 18137262 18137437 -102146875 - L1M3 LINE L1 -863 5277 5093 2 723 33056 72 8 0 chr13 18137511 18142665 -102141647 + L1Md_F2 LINE L1 392 5585 -298 2 723 8683 40 7 0 chr13 18142667 18143655 -102140657 + L1Md_F2 LINE L1 5588 6582 0 2 723 364 317 253 34 chr13 18143841 18144196 -102140116 - Tigger9a DNA Tigger -36 696 264 2 723 1380 180 71 48 chr13 18144769 18145120 -102139192 - RLTR10D LTR ERVK 0 359 1 2 723 2171 158 19 19 chr13 18145120 18145495 -102138817 - IAP-d-int LTR ERVK 0 6542 6168 2 723 2676 219 5 7 chr13 18145547 18146131 -102138181 - IAP-d-int LTR ERVK -486 6056 5474 2 723 5457 259 20 16 chr13 18146119 18147718 -102136594 - IAP-d-int LTR ERVK -1366 5176 3571 2 723 1055 249 18 18 chr13 18147768 18148046 -102136266 - IAP-d-int LTR ERVK -3092 3450 3173 2 723 600 201 14 61 chr13 18148095 18148243 -102136069 - IAP-d-int LTR ERVK -6401 141 1 2 723 1398 177 71 48 chr13 18148243 18148594 -102135718 - RLTR10D LTR ERVK 0 359 1 2 723 1023 202 64 0 chr13 18148759 18148962 -102135350 - B3 SINE B2 0 216 1 2 723 204 143 29 0 chr13 18150142 18150177 -102134135 + CT-rich Low_complexity Low_complexity 1 36 0 2 723 469 273 40 0 chr13 18150189 18150288 -102134024 - PB1D10 SINE Alu -14 103 1 2 723 460 326 20 34 chr13 18150732 18150878 -102133434 + B1F1 SINE Alu 1 144 -5 2 723 666 247 168 108 chr13 18152827 18153142 -102131170 - MLT1A1 LTR MaLR 0 408 61 2 723 3232 62 41 0 chr13 18153142 18153532 -102130780 - L1_Mus1 LINE L1 -3 6564 6159 2 723 666 247 168 108 chr13 18153532 18153597 -102130715 - MLT1A1 LTR MaLR -348 60 5 2 723 499 309 22 0 chr13 18153599 18153735 -102130577 + MLT1E LTR MaLR 22 160 -493 2 723 455 309 127 14 chr13 18153790 18154010 -102130302 + MLT1E LTR MaLR 286 530 -150 2 723 214 233 147 27 chr13 18154097 18154172 -102130140 - MER5A DNA MER1_type -102 87 4 2 723 21 0 0 0 chr13 18154612 18154633 -102129679 + AT_rich Low_complexity Low_complexity 1 21 0 2 723 3424 182 63 69 chr13 18155008 18155816 -102128496 - RLTR40 LTR ERVK -14 803 1 2 723 333 0 0 0 chr13 18155841 18155878 -102128434 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 723 278 203 34 0 chr13 18156636 18156695 -102127617 - MER2 DNA MER2_type -198 147 87 2 723 2873 46 6 9 chr13 18157026 18157375 -102126937 - L1_Mus1 LINE L1 -1 6566 6219 2 723 24 53 0 0 chr13 18157585 18157623 -102126689 + AT_rich Low_complexity Low_complexity 1 38 0 2 723 22 0 0 0 chr13 18157683 18157705 -102126607 + AT_rich Low_complexity Low_complexity 1 22 0 2 723 697 291 94 54 chr13 18158359 18158690 -102125622 + ORR1E LTR MaLR 15 358 -1 2 723 7860 100 3 5 chr13 18159082 18160322 -102123990 - Lx LINE L1 0 6654 5419 2 723 396 222 12 30 chr13 18160355 18160454 -102123858 - B3 SINE B2 -94 104 15 2 723 3912 128 4 2 chr13 18160455 18161017 -102123295 + Lx LINE L1 6076 6638 -16 2 723 441 0 0 0 chr13 18161017 18161066 -102123246 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 2 723 2948 291 82 98 chr13 18161076 18162359 -102121953 + Lx8 LINE L1 5301 6654 -819 2 723 2688 162 172 2 chr13 18162359 18162859 -102121453 - RMER4B LTR ERVK 0 585 1 2 723 2948 286 89 118 chr13 18162859 18163138 -102121174 + Lx8 LINE L1 6655 6950 -523 2 723 663 65 0 0 chr13 18163138 18163231 -102121081 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 2 723 2948 286 89 118 chr13 18163231 18163879 -102120433 + Lx8 LINE L1 6951 7472 -1 2 723 251 238 67 56 chr13 18163885 18163974 -102120338 - L1M4 LINE L1 -2047 4099 4010 2 723 640 311 0 41 chr13 18164004 18164175 -102120137 - RSINE1 SINE B4 0 165 2 2 723 233 272 97 0 chr13 18164176 18164279 -102120033 - L1MC LINE L1 -2120 4026 3914 2 723 716 207 0 0 chr13 18164652 18164787 -102119525 - B1_Mur1 SINE Alu -4 145 11 2 723 649 364 144 20 chr13 18164820 18165229 -102119083 - LTR16B2 LTR ERVL 0 462 3 2 723 1562 246 59 8 chr13 18165314 18165670 -102118642 - MTE2b LTR MaLR -5 374 1 2 723 691 244 75 20 chr13 18165668 18165728 -102118584 - ORR1E LTR MaLR -3 356 292 2 723 357 24 0 0 chr13 18165728 18165770 -102118542 + (TTA)n Simple_repeat Simple_repeat 1 42 0 2 723 691 244 75 20 chr13 18165770 18165910 -102118402 - ORR1E LTR MaLR -68 291 145 2 723 458 229 0 0 chr13 18165910 18165993 -102118319 - Lx7 LINE L1 -996 6700 6618 2 723 2637 192 59 6 chr13 18165988 18166449 -102117863 + Lx9 LINE L1 7036 7526 -118 2 723 4385 171 77 70 chr13 18166449 18167345 -102116967 + RMER19B LTR ERVK 1 902 0 2 723 2588 190 60 6 chr13 18167345 18167392 -102116920 + Lx9 LINE L1 7527 7571 -73 2 723 1351 307 27 23 chr13 18167435 18167909 -102116403 - Lx8 LINE L1 -820 6653 6178 2 723 47 33 0 0 chr13 18167909 18167970 -102116342 + AT_rich Low_complexity Low_complexity 1 61 0 2 723 471 317 98 48 chr13 18167971 18168329 -102115983 - Lx8 LINE L1 -1281 6192 5817 2 723 1334 317 31 29 chr13 18168330 18168416 -102115896 + Lx8 LINE L1 6722 6805 -668 2 723 1252 49 0 7 chr13 18168416 18168551 -102115761 + B1_Mm SINE Alu 2 136 -11 2 723 294 29 0 0 chr13 18168551 18168586 -102115726 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 723 1334 317 31 29 chr13 18168594 18169059 -102115253 + Lx8 LINE L1 6806 7274 -199 2 723 52 0 0 0 chr13 18169159 18169211 -102115101 + AT_rich Low_complexity Low_complexity 1 52 0 2 723 541 256 0 90 chr13 18169244 18169377 -102114935 - ORR1E LTR MaLR -238 121 1 2 723 37 23 0 0 chr13 18169387 18169431 -102114881 + AT_rich Low_complexity Low_complexity 1 44 0 2 723 504 175 0 0 chr13 18169459 18169556 -102114756 + (TA)n Simple_repeat Simple_repeat 2 98 0 2 723 219 208 21 0 chr13 18169574 18169622 -102114690 + (TA)n Simple_repeat Simple_repeat 1 49 0 2 723 373 202 36 0 chr13 18169623 18169707 -102114605 - ORR1E-int LTR MaLR -188 1182 1096 2 723 240 367 0 22 chr13 18169756 18169848 -102114464 + LTR88c LTR Genie? 79 168 -694 2 723 416 266 0 17 chr13 18170813 18170928 -102113384 + Lx6 LINE L1 7175 7287 -173 2 723 473 320 109 72 chr13 18170929 18171205 -102113107 - MLT1I LTR MaLR -49 362 77 2 723 350 101 14 0 chr13 18171574 18171643 -102112669 + (TC)n Simple_repeat Simple_repeat 1 70 0 2 723 731 342 104 0 chr13 18171643 18171903 -102112409 - B4 SINE B4 -4 288 2 2 723 639 282 60 22 chr13 18172576 18172761 -102111551 + B3A SINE B2 2 193 -5 2 723 464 292 9 0 chr13 18173686 18173799 -102110513 - PB1D10 SINE Alu 0 117 4 2 723 258 213 91 26 chr13 18176338 18176415 -102107897 - ORR1D1 LTR MaLR -24 360 279 2 723 630 174 9 0 chr13 18176416 18176525 -102107787 - ORR1D1 LTR MaLR -264 110 1 2 723 424 378 74 10 chr13 18176573 18176776 -102107536 + MamGypLTR1b LTR Gypsy 440 655 -127 2 723 1092 254 51 79 chr13 18178109 18178656 -102105656 + L1MA5 LINE L1 5769 6300 0 2 723 253 287 15 15 chr13 18178860 18178936 -102105376 + MLT1J2 LTR MaLR 66 179 -333 2 723 246 250 25 12 chr13 18179519 18179600 -102104712 + GA-rich Low_complexity Low_complexity 1 82 0 2 723 1537 70 0 0 chr13 18180142 18180328 -102103984 - L1_Mus1 LINE L1 -1 6566 6381 2 723 183 80 0 0 chr13 18180550 18180575 -102103737 + (A)n Simple_repeat Simple_repeat 1 25 0 2 723 786 266 122 14 chr13 18181788 18181858 -102102454 + MER2 DNA MER2_type 1 76 -269 2 723 203 0 0 36 chr13 18181858 18181886 -102102426 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 723 786 266 122 14 chr13 18181886 18182101 -102102211 + MER2 DNA MER2_type 77 317 -28 2 723 914 316 123 34 chr13 18182814 18183377 -102100935 - Lx8 LINE L1 -2 7471 6859 2 723 29 47 0 0 chr13 18184080 18184123 -102100189 + AT_rich Low_complexity Low_complexity 1 43 0 2 723 433 0 35 0 chr13 18184281 18184338 -102099974 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 2 723 236 231 219 49 chr13 18184693 18184775 -102099537 + RSINE1 SINE B4 2 97 -68 2 723 226 254 15 45 chr13 18184797 18184863 -102099449 + RMER15 LTR ERVL 1 64 -511 2 723 999 263 237 22 chr13 18184880 18185331 -102098981 + RMER15 LTR ERVL 28 575 0 2 723 677 261 6 24 chr13 18185442 18185611 -102098701 - MT2B2 LTR ERVL -18 566 401 2 723 11657 63 1 1 chr13 18185623 18187786 -102096526 - L1Md_F2 LINE L1 -2 6580 4420 2 723 562 231 168 24 chr13 18187786 18187995 -102096317 - MT2B2 LTR ERVL -161 332 99 2 723 360 228 25 0 chr13 18188047 18188126 -102096186 - MT2B2 LTR ERVL -445 88 8 2 723 615 296 108 45 chr13 18188235 18188460 -102095852 - MLT1A1 LTR MaLR -6 402 159 2 723 189 0 0 0 chr13 18188460 18188481 -102095831 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 723 615 296 108 45 chr13 18188481 18188524 -102095788 - MLT1A1 LTR MaLR -250 158 118 2 723 343 262 92 55 chr13 18188841 18188950 -102095362 + MTE2b LTR MaLR 180 292 -87 3 723 565 164 81 8 chr13 18189118 18189241 -102095071 - RMER1B Other Other -11 1055 924 3 723 1141 68 0 28 chr13 18189248 18189430 -102094882 + (GAA)n Simple_repeat Simple_repeat 3 179 0 3 723 788 263 27 40 chr13 18189432 18189654 -102094658 - RMER1B Other Other -493 573 355 3 723 351 0 0 0 chr13 18189701 18189740 -102094572 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 723 896 264 25 76 chr13 18189906 18190144 -102094168 + MTEa LTR MaLR 61 286 -93 3 723 340 221 86 10 chr13 18190577 18190682 -102093630 + MTEa LTR MaLR 268 379 0 3 723 393 291 81 45 chr13 18190682 18190860 -102093452 - RMER5 LTR ERV1 -184 350 166 3 723 1854 146 170 3 chr13 18190877 18191206 -102093106 - ORR1C2 LTR MaLR 0 384 1 3 723 2070 173 67 29 chr13 18191206 18191652 -102092660 - ORR1C2-int LTR MaLR 0 1509 1047 3 723 3944 169 48 71 chr13 18192132 18192994 -102091318 + RMER21B LTR ERV1 1 842 0 3 723 305 310 30 10 chr13 18193102 18193203 -102091109 + ORR1E LTR MaLR 35 137 -222 3 723 234 0 0 0 chr13 18193309 18193335 -102090977 + (T)n Simple_repeat Simple_repeat 1 26 0 3 723 1198 82 0 0 chr13 18193335 18193482 -102090830 - B1_Mus2 SINE Alu 0 147 1 3 723 335 41 0 20 chr13 18194168 18194218 -102090094 + (TTG)n Simple_repeat Simple_repeat 2 50 0 3 723 353 278 94 70 chr13 18194223 18194436 -102089876 - L1M2 LINE L1 -2477 3666 3449 3 723 338 222 15 9 chr13 18194624 18194759 -102089553 - L1M2 LINE L1 -2554 3293 3164 3 723 248 366 158 21 chr13 18195206 18195446 -102088866 - L2c LINE L2 -195 3192 2920 3 723 262 300 0 0 chr13 18195530 18195590 -102088722 - B3A SINE B2 -74 124 65 3 723 458 312 69 29 chr13 18196079 18196254 -102088058 - ORR1E LTR MaLR -144 215 34 3 723 567 269 71 0 chr13 18196508 18196690 -102087622 - Lx7 LINE L1 -1782 5914 5720 3 723 1647 227 62 74 chr13 18196820 18196992 -102087320 - RLTR16 LTR ERVK -12 493 321 3 723 899 67 117 0 chr13 18196992 18197112 -102087200 - B1_Mm SINE Alu -12 135 2 3 723 1647 227 62 74 chr13 18197112 18197438 -102086874 - RLTR16 LTR ERVK -185 320 1 3 723 280 301 70 52 chr13 18197441 18197613 -102086699 - L1_Rod LINE L1 -159 5688 5514 3 723 808 185 40 17 chr13 18197613 18197789 -102086523 - B2_Mm2 SINE B2 -8 187 8 3 723 579 29 0 0 chr13 18197872 18197941 -102086371 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 3 723 290 277 11 98 chr13 18198154 18198246 -102086066 - RSINE1 SINE B4 0 165 82 3 723 342 344 64 64 chr13 18198840 18199021 -102085291 - MER90 LTR ERV1 -17 558 378 3 723 860 154 184 41 chr13 18199021 18199217 -102085095 - URR1B DNA MER1_type -1 224 1 3 723 342 344 64 64 chr13 18199217 18199346 -102084966 - MER90 LTR ERV1 -198 377 248 3 723 220 306 147 39 chr13 18201161 18201263 -102083049 + MER5B DNA MER1_type 2 114 -64 3 723 291 289 0 0 chr13 18201263 18201339 -102082973 + Lx9 LINE L1 7278 7353 -291 3 723 38545 57 4 2 chr13 18201347 18207516 -102076796 - L1Md_F3 LINE L1 0 6584 446 3 723 557 174 48 8 chr13 18207583 18207792 -102076520 + Lx9 LINE L1 7367 7644 0 3 723 448 270 76 80 chr13 18208960 18209274 -102075038 - Charlie18a DNA MER1_type -15 327 15 3 723 270 269 63 63 chr13 18210390 18210533 -102073779 + Tigger15a DNA TcMar 468 610 -105 3 723 243 140 0 0 chr13 18211091 18211141 -102073171 - Lx6 LINE L1 -27 7433 7384 3 723 298 142 19 4 chr13 18211143 18211209 -102073103 + L1_Mur3 LINE L1 5575 5646 -240 3 723 2262 81 3 25 chr13 18211234 18211550 -102072762 - L1Md_F2 LINE L1 0 6582 6274 3 723 1487 27 7 0 chr13 18211724 18212022 -102072290 + (TCTA)n Simple_repeat Simple_repeat 1 299 0 3 723 216 0 0 0 chr13 18213055 18213079 -102071233 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3 723 243 140 0 0 chr13 18213833 18213883 -102070429 + (T)n Simple_repeat Simple_repeat 1 50 0 3 723 29 60 0 0 chr13 18214386 18214436 -102069876 + AT_rich Low_complexity Low_complexity 1 50 0 3 723 243 115 32 32 chr13 18216523 18216586 -102067726 + (TTTG)n Simple_repeat Simple_repeat 3 65 0 3 723 23 33 0 0 chr13 18216757 18216787 -102067525 + AT_rich Low_complexity Low_complexity 1 30 0 3 723 188 135 27 0 chr13 18216896 18216933 -102067379 + CT-rich Low_complexity Low_complexity 2 39 0 3 724 192 185 0 0 chr13 18220202 18220256 -102064056 + G-rich Low_complexity Low_complexity 1 54 0 3 724 612 0 0 0 chr13 18220294 18220362 -102063950 + (TTCC)n Simple_repeat Simple_repeat 2 69 0 3 724 1116 194 192 24 chr13 18222481 18222596 -102061716 + Lx7 LINE L1 7253 7379 -317 3 724 1673 179 207 21 chr13 18222596 18222968 -102061344 + BGLII_B LTR ERVK 1 441 0 3 724 1116 194 192 24 chr13 18222968 18223232 -102061080 + Lx7 LINE L1 7380 7696 0 3 724 438 155 0 0 chr13 18224225 18224322 -102059990 + A-rich Low_complexity Low_complexity 1 97 0 3 724 217 132 0 0 chr13 18224326 18224364 -102059948 + (CCG)n Simple_repeat Simple_repeat 2 39 0 3 724 1621 225 72 114 chr13 18224364 18225365 -102058947 + RMER17B LTR ERVK 1 904 -4 3 724 546 29 0 0 chr13 18225963 18226031 -102058281 + (CA)n Simple_repeat Simple_repeat 1 68 0 3 724 867 20 0 0 chr13 18227297 18227398 -102056914 + (TTCC)n Simple_repeat Simple_repeat 2 102 0 3 724 435 38 0 0 chr13 18227407 18227460 -102056852 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 724 195 42 0 0 chr13 18227881 18227905 -102056407 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 724 270 314 92 67 chr13 18228057 18228294 -102056018 + B4A SINE B4 15 262 -30 3 724 258 32 0 0 chr13 18228322 18228353 -102055959 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 724 1004 87 0 7 chr13 18228810 18228960 -102055352 + (TTTC)n Simple_repeat Simple_repeat 3 151 0 3 724 264 264 125 83 chr13 18228978 18229098 -102055214 + MER21B LTR ERV1 60 184 -679 3 724 225 208 0 19 chr13 18229141 18229195 -102055117 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 724 315 150 0 0 chr13 18229949 18230009 -102054303 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 724 525 69 35 0 chr13 18231239 18231326 -102052986 + (GA)n Simple_repeat Simple_repeat 1 90 0 3 724 192 125 0 0 chr13 18231412 18231444 -102052868 + (GGA)n Simple_repeat Simple_repeat 2 33 0 3 724 725 190 0 35 chr13 18232144 18232286 -102052026 - B1_Mur3 SINE Alu -12 137 1 3 724 486 0 0 0 chr13 18232309 18232363 -102051949 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 3 724 494 294 70 6 chr13 18232396 18232567 -102051745 - B3A SINE B2 -16 182 1 3 724 742 298 90 78 chr13 18233243 18233891 -102050421 - L1ME2 LINE L1 -63 6101 5459 3 724 2801 27 15 0 chr13 18234971 18235303 -102049009 + L1Md_F3 LINE L1 6233 6569 -15 3 724 1536 201 90 16 chr13 18235434 18235813 -102048499 + MTD LTR MaLR 1 407 -12 3 724 25 51 0 0 chr13 18235887 18235926 -102048386 + AT_rich Low_complexity Low_complexity 1 39 0 3 724 207 0 0 0 chr13 18240137 18240160 -102044152 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 3 724 344 272 114 0 chr13 18240255 18240369 -102043943 + B1_Mur1 SINE Alu 2 128 -21 3 724 2653 156 35 7 chr13 18240834 18241287 -102043025 + RMER4A LTR ERVK 1 466 0 3 724 246 176 0 0 chr13 18242381 18242432 -102041880 + (TCG)n Simple_repeat Simple_repeat 2 52 0 3 724 886 27 27 9 chr13 18242749 18242860 -102041452 - L1_Mus1 LINE L1 -202 6365 6253 3 724 1625 57 8 62 chr13 18242860 18243102 -102041210 + L1Md_F2 LINE L1 6342 6570 -12 3 724 24 24 0 24 chr13 18243463 18243484 -102040828 + AT_rich Low_complexity Low_complexity 1 21 0 3 724 1191 55 0 14 chr13 18243484 18243631 -102040681 - B1_Mus2 SINE Alu 0 147 3 3 724 24 24 0 24 chr13 18243631 18243651 -102040661 + AT_rich Low_complexity Low_complexity 1 20 0 3 724 258 226 75 0 chr13 18247592 18247645 -102036667 - PB1D10 SINE Alu -57 60 4 3 724 224 245 0 0 chr13 18249532 18249585 -102034727 + MIRc SINE MIR 102 154 -114 3 724 387 246 88 11 chr13 18249731 18249843 -102034469 - PB1D10 SINE Alu -24 125 9 3 724 247 276 17 0 chr13 18249792 18249850 -102034462 - B4A SINE B4 -147 145 87 3 724 324 0 0 0 chr13 18250399 18250435 -102033877 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 724 1098 29 0 0 chr13 18250468 18250607 -102033705 + B1_Mm SINE Alu 9 147 0 3 724 22 0 0 0 chr13 18250607 18250629 -102033683 + AT_rich Low_complexity Low_complexity 1 22 0 3 724 353 75 19 0 chr13 18250648 18250701 -102033611 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 724 291 28 0 0 chr13 18252320 18252356 -102031956 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 3 724 219 36 0 0 chr13 18252361 18252389 -102031923 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 3 724 306 0 0 0 chr13 18252705 18252739 -102031573 + (T)n Simple_repeat Simple_repeat 1 34 0 3 724 265 327 98 49 chr13 18254224 18254388 -102029924 + MIRb SINE MIR 46 217 -51 3 724 22 0 0 0 chr13 18255585 18255607 -102028705 + AT_rich Low_complexity Low_complexity 1 22 0 3 724 378 339 74 84 chr13 18256614 18257020 -102027292 + RLTR11A2 LTR ERVK 118 519 -8 3 724 852 39 0 0 chr13 18257382 18257486 -102026826 + (TC)n Simple_repeat Simple_repeat 1 104 0 3 724 272 251 0 14 chr13 18260066 18260137 -102024175 + ID_B1 SINE B4 74 140 -152 3 724 306 0 0 0 chr13 18260989 18261023 -102023289 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 724 904 256 45 15 chr13 18261023 18261284 -102023028 - B4 SINE B4 -16 276 8 3 724 423 0 0 0 chr13 18263698 18263745 -102020567 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 724 25 31 0 0 chr13 18263870 18263902 -102020410 + AT_rich Low_complexity Low_complexity 1 32 0 3 724 1013 62 47 0 chr13 18266529 18266658 -102017654 + B1_Mus1 SINE Alu 5 139 -9 3 724 282 29 0 0 chr13 18266658 18266693 -102017619 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 724 321 202 112 0 chr13 18266874 18266963 -102017349 - BC1_Mm scRNA scRNA -47 105 7 3 724 451 191 72 9 chr13 18268056 18268167 -102016145 - PB1D7 SINE Alu -2 118 1 4 724 352 245 30 10 chr13 18268657 18268756 -102015556 - ID_B1 SINE B4 0 224 124 4 724 706 320 46 97 chr13 18270738 18270768 -102013544 + MER21B LTR ERV1 415 442 -421 4 724 1036 149 159 0 chr13 18270768 18270963 -102013349 - URR1A DNA MER1_type 0 226 1 4 724 706 320 46 97 chr13 18270963 18271344 -102012968 + MER21B LTR ERV1 443 805 -58 4 724 287 270 16 0 chr13 18271879 18271942 -102012370 + tRNA-Ala-GCY_ tRNA tRNA 5 68 -7 4 724 1414 230 33 47 chr13 18272502 18272867 -102011445 + MTEb LTR MaLR 12 371 -8 4 724 203 202 28 14 chr13 18274107 18274224 -102010088 + CT-rich Low_complexity Low_complexity 1 118 0 4 724 1112 114 6 0 chr13 18274229 18274405 -102009907 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 4 724 250 105 26 0 chr13 18276608 18276646 -102007666 - Lx LINE L1 -751 5903 5865 4 724 4956 120 17 9 chr13 18276646 18277401 -102006911 + Lx LINE L1 5894 6654 0 4 724 194 0 0 37 chr13 18278005 18278032 -102006280 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 724 261 0 0 0 chr13 18279190 18279219 -102005093 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 724 434 237 28 93 chr13 18279220 18279327 -102004985 - PB1D7 SINE Alu -9 111 12 4 724 182 176 20 0 chr13 18279853 18279904 -102004408 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 724 337 294 6 18 chr13 18279930 18280096 -102004216 + (CA)n Simple_repeat Simple_repeat 1 164 0 4 724 232 229 0 18 chr13 18280111 18280222 -102004090 + (CA)n Simple_repeat Simple_repeat 1 109 0 4 724 451 268 32 6 chr13 18280236 18280394 -102003918 + (CA)n Simple_repeat Simple_repeat 2 163 0 4 724 1296 227 85 60 chr13 18282768 18283203 -102001109 - L1MC1 LINE L1 -436 5897 5452 4 724 247 256 25 13 chr13 18283211 18283290 -102001022 + L1MC1 LINE L1 5863 5942 -391 4 724 603 238 99 14 chr13 18283345 18283558 -102000754 + L1MC1 LINE L1 6081 6311 -22 4 724 3732 56 0 0 chr13 18283608 18284037 -102000275 - L1_Mus1 LINE L1 0 6567 6139 4 724 459 330 18 0 chr13 18284124 18284236 -102000076 + RSINE1 SINE B4 33 146 -19 4 724 329 366 63 24 chr13 18284654 18284682 -101999630 - LTR16A LTR ERVL -12 439 414 4 724 803 134 314 0 chr13 18284682 18284854 -101999458 - URR1A DNA MER1_type 0 226 1 4 724 329 366 63 24 chr13 18284854 18285032 -101999280 - LTR16A LTR ERVL -38 413 225 4 724 187 344 35 92 chr13 18285448 18285474 -101998838 + L2b LINE L2 3205 3228 -147 4 724 976 138 0 33 chr13 18285474 18285624 -101998688 - B1_Mus1 SINE Alu 0 148 4 4 724 187 344 35 92 chr13 18285624 18285738 -101998574 + L2b LINE L2 3229 3337 -38 4 724 213 313 24 109 chr13 18285798 18285963 -101998349 + L2c LINE L2 3236 3386 -1 4 724 239 362 137 4 chr13 18285971 18286248 -101998064 + L4 LINE RTE 1709 2022 -7 4 724 288 337 98 50 chr13 18286581 18286978 -101997334 - L2a LINE L2 0 3426 3011 4 724 621 234 97 0 chr13 18288330 18288484 -101995828 + B3 SINE B2 4 172 -44 4 724 324 0 0 0 chr13 18289369 18289405 -101994907 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 724 224 188 15 15 chr13 18289536 18289601 -101994711 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 724 283 265 139 70 chr13 18290476 18290634 -101993678 - MIRb SINE MIR -54 214 46 4 724 345 262 114 19 chr13 18291331 18291436 -101992876 + PB1D10 SINE Alu 3 117 0 4 724 2824 114 2 5 chr13 18292756 18293154 -101991158 + Lx2 LINE L1 6239 6635 -362 4 724 3442 78 21 5 chr13 18293526 18293963 -101990349 - L1Md_F2 LINE L1 -12 6570 6127 4 724 454 280 45 45 chr13 18294092 18294249 -101990063 - RSINE1 SINE B4 -1 164 8 4 724 339 291 62 88 chr13 18294260 18294373 -101989939 - MER2 DNA MER2_type -2 343 234 4 724 216 268 18 0 chr13 18294384 18294440 -101989872 + CT-rich Low_complexity Low_complexity 2 58 0 4 724 869 52 9 0 chr13 18294440 18294555 -101989757 + (TTC)n Simple_repeat Simple_repeat 1 116 0 4 724 22 56 0 0 chr13 18295023 18295059 -101989253 + AT_rich Low_complexity Low_complexity 1 36 0 4 724 268 168 38 53 chr13 18295611 18295743 -101988569 + GA-rich Low_complexity Low_complexity 4 133 0 4 724 393 310 20 60 chr13 18295931 18296082 -101988230 - MIR SINE MIR -70 192 48 4 724 516 122 0 0 chr13 18297737 18297819 -101986493 + (A)n Simple_repeat Simple_repeat 1 82 0 4 724 21 57 0 0 chr13 18298240 18298275 -101986037 + AT_rich Low_complexity Low_complexity 1 35 0 4 724 2817 61 3 0 chr13 18298321 18298666 -101985646 + L1_Mus1 LINE L1 6124 6469 -98 4 724 364 338 21 7 chr13 18299174 18299314 -101984998 + MER58D DNA MER1_type 2 143 -243 4 724 468 289 156 44 chr13 18299341 18299616 -101984696 + MLT2B4 LTR ERVL 1 306 -250 4 724 261 0 0 0 chr13 18299627 18299656 -101984656 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 724 472 350 12 6 chr13 18299740 18299901 -101984411 - MLT2D LTR ERVL -47 367 206 4 724 352 309 49 21 chr13 18299931 18300073 -101984239 - MLT2D LTR ERVL -410 146 1 4 724 217 262 33 0 chr13 18300501 18300562 -101983750 + MIRc SINE MIR 203 265 -3 4 724 25 0 0 0 chr13 18300801 18300826 -101983486 + AT_rich Low_complexity Low_complexity 1 25 0 4 724 253 378 54 44 chr13 18300980 18301112 -101983200 - Lx9 LINE L1 -3 7470 7330 4 724 365 102 0 17 chr13 18301112 18301172 -101983140 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 724 628 315 124 57 chr13 18301172 18301595 -101982717 - Lx9 LINE L1 -216 7428 7007 4 724 246 70 17 50 chr13 18302046 18302106 -101982206 + (TTTTTG)n Simple_repeat Simple_repeat 2 59 0 4 724 843 64 0 0 chr13 18302944 18303054 -101981258 + (GAA)n Simple_repeat Simple_repeat 3 112 0 4 724 1410 250 157 65 chr13 18303748 18304831 -101979481 - L1MA7 LINE L1 0 6291 5100 4 724 576 219 18 0 chr13 18305947 18306116 -101978196 + (TA)n Simple_repeat Simple_repeat 2 173 0 4 724 267 31 0 0 chr13 18306117 18306149 -101978163 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 724 295 32 0 62 chr13 18307083 18307133 -101977179 - tRNA-Glu-GAG_ tRNA tRNA -26 49 1 4 724 363 318 112 48 chr13 18307524 18307835 -101976477 - HAL1 LINE L1 -737 1770 1440 4 724 235 252 43 86 chr13 18309577 18309694 -101974618 + MLT1A1 LTR MaLR 297 408 0 4 724 435 19 0 0 chr13 18310125 18310177 -101974135 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 724 243 0 0 0 chr13 18311585 18311612 -101972700 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 4 724 372 290 71 48 chr13 18312917 18313413 -101970899 + L1_Mur3 LINE L1 888 1396 -4484 4 724 1160 223 36 11 chr13 18313614 18313987 -101970325 + L1_Mur3 LINE L1 2281 2614 -3269 4 724 1362 252 48 191 chr13 18313992 18314761 -101969551 + Lx7 LINE L1 5825 6483 -1213 4 724 1738 278 29 8 chr13 18314790 18315269 -101969043 + Lx7 LINE L1 6817 7305 -391 4 724 404 91 15 0 chr13 18315274 18315340 -101968972 + (TATG)n Simple_repeat Simple_repeat 4 70 0 4 724 5979 259 58 28 chr13 18315400 18316606 -101967706 + Lx7 LINE L1 3920 5183 -697 4 724 207 0 0 0 chr13 18316606 18316629 -101967683 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 724 5979 259 58 28 chr13 18316629 18316893 -101967419 + Lx7 LINE L1 5184 5448 -432 4 724 201 39 0 0 chr13 18316893 18316919 -101967393 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 724 5979 267 66 23 chr13 18316919 18317509 -101966803 + Lx7 LINE L1 5449 6051 -1645 4 724 297 321 50 55 chr13 18317524 18317910 -101966402 + RLTR15 LTR ERVK 34 288 -71 4 724 925 305 142 78 chr13 18317975 18318618 -101965694 + Lx7 LINE L1 6053 6736 -960 4 724 251 326 0 11 chr13 18318630 18318720 -101965592 + B4A SINE B4 155 243 -49 4 724 411 21 0 0 chr13 18318826 18318874 -101965438 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 724 216 0 0 0 chr13 18318874 18318898 -101965414 + (GA)n Simple_repeat Simple_repeat 1 24 0 4 724 24 32 0 0 chr13 18318898 18318929 -101965383 + AT_rich Low_complexity Low_complexity 1 31 0 4 724 1181 271 133 8 chr13 18318929 18319297 -101965015 - MTD LTR MaLR 0 419 6 4 724 1508 271 121 55 chr13 18319308 18320072 -101964240 - MTD-int LTR MaLR -6 1252 336 4 724 1346 216 44 7 chr13 18320087 18320358 -101963954 - ORR1D1 LTR MaLR -73 301 21 4 724 771 160 15 0 chr13 18320400 18320531 -101963781 + B1_Mus1 SINE Alu 15 147 -1 4 724 634 221 135 5 chr13 18320540 18320740 -101963572 + RCHARR1 DNA MER1_type 748 973 -1 4 724 1113 155 130 0 chr13 18321223 18321423 -101962889 - URR1A DNA MER1_type 0 226 1 4 724 222 222 88 73 chr13 18321440 18321508 -101962804 - L4 LINE RTE -1743 286 218 4 724 739 296 6 0 chr13 18323169 18323331 -101960981 + RSINE1 SINE B4 3 165 0 4 724 324 283 35 48 chr13 18326047 18326192 -101958120 - MER96B DNA hAT -241 176 34 4 724 527 152 9 0 chr13 18326856 18326968 -101957344 + CT-rich Low_complexity Low_complexity 1 113 0 4 724 241 281 12 12 chr13 18327407 18327490 -101956822 - MIR SINE MIR -72 136 54 4 724 203 0 37 0 chr13 18327724 18327751 -101956561 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 724 520 334 99 56 chr13 18329421 18329776 -101954536 + ORR1D2 LTR MaLR 1 370 0 4 724 606 51 0 0 chr13 18330000 18330078 -101954234 + (TA)n Simple_repeat Simple_repeat 2 79 0 4 724 183 146 36 143 chr13 18331098 18331154 -101953158 + L2a LINE L2 3321 3370 -56 4 724 354 138 0 0 chr13 18331592 18331650 -101952662 + (TTG)n Simple_repeat Simple_repeat 1 58 0 4 724 838 237 117 127 chr13 18332360 18332660 -101951652 - Lx5 LINE L1 -82 6968 6672 4 724 1576 178 111 6 chr13 18332663 18332979 -101951333 + Lx5 LINE L1 6354 6702 -348 4 724 930 279 85 95 chr13 18333571 18334134 -101950178 + RMER20B LTR ERVK 1 606 -21 4 724 575 338 112 22 chr13 18335871 18336140 -101948172 - MER2 DNA MER2_type -22 323 31 4 724 805 283 17 17 chr13 18336341 18336632 -101947680 - Lx7 LINE L1 -1790 5906 5616 4 724 1666 135 10 38 chr13 18336633 18336926 -101947386 + ORR1A4 LTR MaLR 2 286 -43 4 724 1288 198 7 28 chr13 18336927 18337218 -101947094 + L1VL4 LINE L1 174 458 -5844 4 724 301 295 34 11 chr13 18337220 18337309 -101947003 + RMER30 DNA MER1_type 1 91 -111 4 724 279 292 7 93 chr13 18337256 18337407 -101946905 - Charlie12 DNA MER1_type -2702 171 34 4 724 372 309 100 122 chr13 18337685 18338227 -101946085 + MT2A LTR ERVL 4 533 0 4 724 405 0 0 0 chr13 18338379 18338424 -101945888 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 724 321 89 0 0 chr13 18338424 18338468 -101945844 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 724 293 377 41 0 chr13 18338719 18338841 -101945471 - L2b LINE L2 0 3375 3249 4 724 358 315 98 7 chr13 18339196 18339471 -101944841 + L1MB5 LINE L1 5854 6153 -30 4 724 1476 229 59 13 chr13 18339752 18340125 -101944187 + MTD LTR MaLR 1 396 0 4 724 5070 55 2 6 chr13 18341280 18341922 -101942390 + L1Md_F2 LINE L1 5942 6580 -2 4 724 342 299 55 106 chr13 18343450 18343686 -101940626 + HAL1 LINE L1 1344 1567 -940 4 724 24 32 0 0 chr13 18345864 18345895 -101938417 + AT_rich Low_complexity Low_complexity 1 31 0 5 724 360 0 0 0 chr13 18346761 18346801 -101937511 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 724 275 298 138 0 chr13 18346830 18346924 -101937388 - PB1D10 SINE Alu -10 107 1 5 724 522 0 0 0 chr13 18347418 18347476 -101936836 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 5 724 595 164 370 0 chr13 18347690 18347855 -101936457 + URR1A DNA MER1_type 1 226 0 5 724 259 352 8 8 chr13 18348079 18348205 -101936107 + Lx8 LINE L1 7192 7317 -156 5 724 925 253 98 4 chr13 18349003 18349269 -101935043 + Lx8 LINE L1 6814 7104 -369 5 724 183 42 0 0 chr13 18349771 18349795 -101934517 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 90 386 269 193 0 chr13 18349963 18350108 -101934204 - Tigger5 DNA MER2_type 0 2406 2234 5 725 284 291 84 30 chr13 18350158 18350289 -101934023 - Tigger5 DNA MER2_type -2230 176 39 5 725 257 351 56 69 chr13 18350410 18350554 -101933758 + LTR78 LTR ERV1 508 649 -655 5 725 237 313 19 57 chr13 18350898 18351003 -101933309 + LTR78 LTR ERV1 1146 1246 -58 5 725 203 354 0 0 chr13 18351217 18351296 -101933016 - MER5A DNA MER1_type 0 189 111 5 725 207 171 0 0 chr13 18351599 18351634 -101932678 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 725 441 0 0 0 chr13 18351654 18351703 -101932609 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 725 423 0 0 0 chr13 18351703 18351749 -101932563 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 725 29755 90 16 9 chr13 18352590 18358490 -101925822 + L1_Mus1 LINE L1 625 6566 -1 5 725 706 49 10 19 chr13 18358494 18358598 -101925714 + (GAAAA)n Simple_repeat Simple_repeat 2 104 0 5 725 3004 238 102 25 chr13 18359650 18360527 -101923785 + RCHARR1 DNA MER1_type 31 974 0 5 725 31 26 0 0 chr13 18360581 18360619 -101923693 + AT_rich Low_complexity Low_complexity 1 38 0 5 725 219 36 0 0 chr13 18361020 18361048 -101923264 + (G)n Simple_repeat Simple_repeat 1 28 0 5 725 580 284 28 17 chr13 18361066 18361245 -101923067 - RLTR16 LTR ERVK -299 206 26 5 725 231 114 0 0 chr13 18361367 18361402 -101922910 + (T)n Simple_repeat Simple_repeat 1 35 0 5 725 282 298 37 37 chr13 18361581 18361689 -101922623 + B1F1 SINE Alu 29 136 -13 5 725 589 230 64 14 chr13 18361690 18361831 -101922481 - B1_Mus1 SINE Alu 0 148 1 5 725 300 83 0 0 chr13 18361848 18361896 -101922416 + (A)n Simple_repeat Simple_repeat 1 48 0 5 725 235 122 41 0 chr13 18362746 18362795 -101921517 + GA-rich Low_complexity Low_complexity 4 54 0 5 725 247 221 57 19 chr13 18363139 18363245 -101921067 - HAL1b LINE L1 -875 1134 1025 5 725 603 0 0 0 chr13 18363624 18363691 -101920621 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 5 725 211 264 243 26 chr13 18364014 18364166 -101920146 - L2c LINE L2 -9 3378 3194 5 725 205 138 0 0 chr13 18364607 18364636 -101919676 + (TTC)n Simple_repeat Simple_repeat 2 30 0 5 725 307 258 236 5 chr13 18366330 18366525 -101917787 + Arthur1 DNA Tip100 3622 3861 -86 5 725 1266 104 15 25 chr13 18366617 18366814 -101917498 + B2_Mm2 SINE B2 1 195 0 5 725 22 0 0 0 chr13 18368092 18368114 -101916198 + AT_rich Low_complexity Low_complexity 1 22 0 5 725 1359 187 42 102 chr13 18368749 18369082 -101915230 - RLTR11A LTR ERVK -215 313 1 5 725 31 44 0 0 chr13 18369147 18369192 -101915120 + AT_rich Low_complexity Low_complexity 1 45 0 5 725 218 254 18 0 chr13 18370928 18370983 -101913329 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 725 633 282 118 0 chr13 18371006 18371201 -101913111 - Tigger5 DNA MER2_type -13 2393 2176 5 725 756 312 16 5 chr13 18371224 18371414 -101912898 - Tigger5 DNA MER2_type -2214 192 1 5 725 737 221 0 7 chr13 18371940 18372086 -101912226 + B1_Mur2 SINE Alu 5 149 0 5 725 297 0 0 0 chr13 18372190 18372223 -101912089 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 725 547 330 81 25 chr13 18372271 18372554 -101911758 + MLT1B LTR MaLR 86 384 -6 5 725 1593 197 115 3 chr13 18374257 18374588 -101909724 - ORR1D1 LTR MaLR -4 370 3 5 725 348 43 0 0 chr13 18374705 18374751 -101909561 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 725 324 0 0 0 chr13 18374751 18374786 -101909526 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 725 213 139 0 0 chr13 18375059 18375102 -101909210 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 5 725 326 265 10 0 chr13 18376137 18376235 -101908077 + L1MA4 LINE L1 5793 5891 -409 5 725 624 167 83 0 chr13 18376470 18376590 -101907722 - B1_Mus1 SINE Alu -15 133 4 5 725 225 0 0 0 chr13 18378194 18378219 -101906093 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 725 492 18 0 0 chr13 18378219 18378276 -101906036 + (TTTA)n Simple_repeat Simple_repeat 4 60 0 5 725 760 230 0 0 chr13 18379968 18380116 -101904196 - B1_Mur2 SINE Alu -1 148 1 5 725 634 182 80 0 chr13 18380750 18380887 -101903425 + B1_Mur3 SINE Alu 1 148 -1 5 725 1054 242 216 23 chr13 18381324 18381751 -101902561 + Lx8 LINE L1 6963 7471 -2 5 725 23 0 0 0 chr13 18381754 18381777 -101902535 + AT_rich Low_complexity Low_complexity 1 23 0 5 725 212 156 0 0 chr13 18383791 18383823 -101900489 - B1F2 SINE Alu -103 46 15 5 725 237 320 126 0 chr13 18383936 18384039 -101900273 - MIR SINE MIR -110 152 37 5 725 284 321 53 9 chr13 18384439 18384552 -101899760 - MER5A1 DNA MER1_type -20 146 29 5 725 615 67 0 0 chr13 18384601 18384690 -101899622 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 5 725 192 321 98 27 chr13 18384806 18384918 -101899394 - MIR SINE MIR -35 227 108 5 725 38 0 0 0 chr13 18385076 18385114 -101899198 + AT_rich Low_complexity Low_complexity 1 38 0 5 725 780 279 129 4 chr13 18385754 18385995 -101898317 + Lx8 LINE L1 7091 7361 -112 5 725 1416 79 16 0 chr13 18386082 18386271 -101898041 - B2_Mm2 SINE B2 -3 192 1 5 725 21 57 0 0 chr13 18386275 18386310 -101898002 + AT_rich Low_complexity Low_complexity 1 35 0 5 725 677 34 51 8 chr13 18387422 18387540 -101896772 + (TC)n Simple_repeat Simple_repeat 2 124 0 5 725 195 330 93 0 chr13 18388557 18388675 -101895637 + MIRb SINE MIR 13 141 -127 5 725 854 287 79 25 chr13 18388857 18389300 -101895012 + L1MB3 LINE L1 5717 6183 0 5 725 3909 60 14 12 chr13 18389749 18390255 -101894057 + L1_Mus1 LINE L1 6061 6567 0 5 725 504 317 135 51 chr13 18390752 18391048 -101893264 + MLT1C LTR MaLR 139 459 -8 5 725 406 290 27 45 chr13 18391487 18391599 -101892713 + PB1D10 SINE Alu 8 117 0 5 725 700 11 22 0 chr13 18392104 18392193 -101892119 + (TC)n Simple_repeat Simple_repeat 1 91 0 5 725 421 294 107 11 chr13 18393114 18393376 -101890936 - L1MD3 LINE L1 -199 7796 7510 5 725 201 244 0 0 chr13 18394669 18394710 -101889602 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 725 396 286 60 97 chr13 18395345 18395562 -101888750 - MER58B DNA MER1_type -107 234 26 5 725 216 0 0 0 chr13 18395641 18395665 -101888647 + (T)n Simple_repeat Simple_repeat 1 24 0 5 725 233 208 0 0 chr13 18396350 18396398 -101887914 + PB1D10 SINE Alu 69 116 -1 5 725 200 258 30 110 chr13 18396498 18396598 -101887714 - L2 LINE L2 -1984 1435 1344 5 725 277 268 101 55 chr13 18397588 18397805 -101886507 - MER20B DNA MER1_type -4 779 553 5 725 549 341 22 18 chr13 18397921 18398148 -101886164 - MER20B DNA MER1_type -409 374 147 5 725 334 187 22 0 chr13 18401794 18401885 -101882427 + CT-rich Low_complexity Low_complexity 1 93 0 5 725 572 343 125 16 chr13 18402190 18402501 -101881811 + MER2 DNA MER2_type 1 345 0 5 725 1255 264 79 45 chr13 18402539 18402920 -101881392 - MTD LTR MaLR -16 403 10 5 725 618 360 25 8 chr13 18403229 18403470 -101880842 - MER47B DNA MER2_type -173 245 1 5 725 29 28 0 0 chr13 18405240 18405276 -101879036 + AT_rich Low_complexity Low_complexity 1 36 0 5 725 189 171 0 0 chr13 18405354 18405389 -101878923 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 725 231 114 0 0 chr13 18405576 18405611 -101878701 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 725 282 287 58 0 chr13 18405866 18405953 -101878359 - RMER12 LTR ERVK -490 832 741 5 725 180 111 0 0 chr13 18406339 18406366 -101877946 + (CCCCCT)n Simple_repeat Simple_repeat 6 32 0 5 725 671 306 96 51 chr13 18408646 18408980 -101875332 - MLT1D LTR MaLR -122 383 35 5 725 367 193 31 9 chr13 18409029 18409255 -101875057 + (TAGA)n Simple_repeat Simple_repeat 1 231 0 5 725 197 113 30 26 chr13 18409628 18409672 -101874640 - MIRb SINE MIR -4 258 216 5 725 440 330 100 56 chr13 18410027 18410277 -101874035 - B4A SINE B4 -30 262 2 5 725 217 365 85 44 chr13 18411537 18411832 -101872480 - L2a LINE L2 -95 3331 3025 5 725 192 381 39 31 chr13 18412164 18412294 -101872018 + MIRc SINE MIR 14 144 -124 5 725 287 176 0 23 chr13 18412541 18412628 -101871684 + (TCTCTG)n Simple_repeat Simple_repeat 6 90 0 5 725 528 89 0 0 chr13 18412631 18412710 -101871602 + (TG)n Simple_repeat Simple_repeat 2 80 0 5 725 1556 44 9 38 chr13 18413895 18414108 -101870204 - L1Md_F2 LINE L1 -1 6581 6375 5 725 920 9 9 0 chr13 18414112 18414221 -101870091 + (GAA)n Simple_repeat Simple_repeat 2 111 0 5 725 324 0 0 0 chr13 18414489 18414525 -101869787 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 725 333 0 0 0 chr13 18415138 18415175 -101869137 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 725 298 253 108 21 chr13 18416778 18416871 -101867441 + PB1 SINE Alu 23 123 -4 5 725 21 36 0 0 chr13 18416872 18416900 -101867412 + AT_rich Low_complexity Low_complexity 1 28 0 5 725 231 36 0 0 chr13 18417146 18417174 -101867138 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 5 725 296 339 57 45 chr13 18417807 18417983 -101866329 + MIRb SINE MIR 17 194 -74 5 725 333 258 128 8 chr13 18418382 18418507 -101865805 - MIR SINE MIR -111 151 12 5 725 481 303 38 8 chr13 18419854 18419987 -101864325 + B1F SINE Alu 1 137 -12 6 725 1237 119 5 5 chr13 18419999 18420184 -101864128 - B2_Mm2 SINE B2 -10 185 1 6 725 295 311 127 24 chr13 18420443 18420608 -101863704 - MIR SINE MIR -46 216 35 6 725 1138 68 7 13 chr13 18421170 18421319 -101862993 + B1_Mus1 SINE Alu 1 148 0 6 725 234 0 0 0 chr13 18421339 18421365 -101862947 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 6 725 330 182 0 0 chr13 18421368 18421434 -101862878 + A-rich Low_complexity Low_complexity 1 66 0 6 725 973 272 118 15 chr13 18421845 18422185 -101862127 - MTEb LTR MaLR -4 375 1 6 725 203 281 212 30 chr13 18422721 18422820 -101861492 + MIRc SINE MIR 50 166 -102 6 725 376 295 117 47 chr13 18423156 18423580 -101860732 + L1MC LINE L1 5341 5772 -561 6 725 340 315 136 18 chr13 18423695 18423915 -101860397 + L1ME1 LINE L1 5924 6169 -10 6 725 186 283 19 0 chr13 18424803 18424856 -101859456 - MIRb SINE MIR 0 268 215 6 725 669 293 11 37 chr13 18425068 18425240 -101859072 + B3A SINE B2 13 181 -17 6 725 435 52 0 0 chr13 18425240 18425298 -101859014 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 725 669 293 11 37 chr13 18425298 18425313 -101858999 + B3A SINE B2 182 195 -3 6 725 208 234 0 0 chr13 18425594 18425641 -101858671 + CT-rich Low_complexity Low_complexity 2 48 0 6 725 271 342 0 0 chr13 18425641 18425720 -101858592 + (CA)n Simple_repeat Simple_repeat 2 80 0 6 725 270 294 24 0 chr13 18425886 18425971 -101858341 - L1ME3 LINE L1 -187 5975 5889 6 725 557 324 62 33 chr13 18426255 18426466 -101857846 - MER58A DNA MER1_type -1 223 7 6 725 263 240 37 74 chr13 18426845 18426926 -101857386 + Charlie4z DNA MER1_type 21 98 -69 6 725 261 57 0 0 chr13 18426964 18426999 -101857313 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 725 1025 108 7 0 chr13 18426999 18427138 -101857174 - B1_Mus1 SINE Alu -8 140 1 6 725 186 402 24 32 chr13 18428807 18428933 -101855379 + MIR3 SINE MIR 83 207 -1 6 725 21 0 0 0 chr13 18430673 18430694 -101853618 + AT_rich Low_complexity Low_complexity 1 21 0 6 725 225 0 0 0 chr13 18432892 18432917 -101851395 + (TTG)n Simple_repeat Simple_repeat 3 27 0 6 725 324 311 147 38 chr13 18432989 18433226 -101851086 - MLT1J2 LTR MaLR -184 264 3 6 725 502 280 117 41 chr13 18433555 18433752 -101850560 - MER20 DNA MER1_type -7 212 1 6 725 329 241 0 12 chr13 18433764 18433844 -101850468 - ID4_ SINE ID -3 80 2 6 725 249 145 48 0 chr13 18435712 18435774 -101848538 + GA-rich Low_complexity Low_complexity 3 67 0 6 725 21 0 0 0 chr13 18435834 18435855 -101848457 + AT_rich Low_complexity Low_complexity 1 21 0 6 725 412 359 45 7 chr13 18435899 18436053 -101848259 + B4A SINE B4 24 183 -109 6 725 4093 252 49 26 chr13 18436079 18437322 -101846990 + Lx9 LINE L1 6059 7464 -180 6 725 582 143 0 0 chr13 18437323 18437428 -101846884 + (CA)n Simple_repeat Simple_repeat 1 105 0 6 725 330 234 0 72 chr13 18437615 18437698 -101846614 + B4A SINE B4 216 292 0 6 725 702 35 0 0 chr13 18437705 18437790 -101846522 + (TC)n Simple_repeat Simple_repeat 1 85 0 6 725 282 73 0 0 chr13 18437790 18437830 -101846482 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 725 195 42 0 0 chr13 18438474 18438498 -101845814 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 725 221 100 0 111 chr13 18439619 18439664 -101844648 + A-rich Low_complexity Low_complexity 1 40 0 6 725 25 0 0 0 chr13 18440603 18440628 -101843684 + AT_rich Low_complexity Low_complexity 1 25 0 6 725 318 317 48 16 chr13 18440954 18441140 -101843172 - Lx9 LINE L1 -206 7438 7247 6 725 27 0 0 0 chr13 18441352 18441379 -101842933 + AT_rich Low_complexity Low_complexity 1 27 0 6 725 1161 41 7 39 chr13 18441447 18441600 -101842712 - B1_Mus1 SINE Alu 0 148 1 6 725 197 83 0 27 chr13 18441714 18441751 -101842561 + (TTATA)n Simple_repeat Simple_repeat 5 40 0 6 725 1033 292 59 92 chr13 18441990 18442382 -101841930 + MTE2b LTR MaLR 1 379 0 6 725 1118 343 75 22 chr13 18443001 18443481 -101840831 + MLT2B3 LTR ERVL 122 647 -70 6 725 25637 125 63 5 chr13 18443843 18444912 -101839400 + Lx LINE L1 364 1494 -4389 6 725 3726 77 20 6 chr13 18444912 18445408 -101838904 + L1_Mus1 LINE L1 6065 6567 0 6 725 25637 142 13 13 chr13 18445408 18446018 -101838294 + Lx LINE L1 1495 2074 -3809 6 725 270 0 0 0 chr13 18446018 18446048 -101838264 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 6 725 25637 142 13 13 chr13 18446048 18448679 -101835633 + Lx LINE L1 2075 4735 -1148 6 725 180 0 0 0 chr13 18448679 18448699 -101835613 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 725 25637 122 8 8 chr13 18448699 18450608 -101833704 + Lx LINE L1 4736 6648 -6 6 725 295 250 53 18 chr13 18452133 18452247 -101832065 - MER33 DNA MER1_type 0 324 207 6 725 1248 183 7 43 chr13 18452247 18452527 -101831785 + Lx6 LINE L1 7176 7445 -15 6 725 235 330 22 22 chr13 18452597 18452687 -101831625 - MER33 DNA MER1_type -226 98 9 6 725 240 325 0 46 chr13 18452712 18452799 -101831513 - MIRb SINE MIR -23 245 163 6 725 189 171 0 0 chr13 18454244 18454279 -101830033 + T-rich Low_complexity Low_complexity 1 35 0 6 725 618 312 59 34 chr13 18456471 18456710 -101827602 + MER2 DNA MER2_type 98 342 -3 6 725 189 74 0 0 chr13 18457309 18457336 -101826976 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 725 1952 285 72 20 chr13 18457358 18458336 -101825976 + Lx9 LINE L1 6244 7459 -185 6 725 473 0 18 0 chr13 18458337 18458394 -101825918 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 6 725 28 29 0 0 chr13 18458510 18458545 -101825767 + AT_rich Low_complexity Low_complexity 1 35 0 6 725 2795 106 0 42 chr13 18458766 18459191 -101825121 - MTB_Mm LTR MaLR 0 407 1 6 725 726 291 48 134 chr13 18459922 18460295 -101824017 + ORR1E LTR MaLR 1 341 -18 6 725 1132 229 132 65 chr13 18460301 18460642 -101823670 - ORR1D1 LTR MaLR -8 366 3 6 725 203 0 0 36 chr13 18461015 18461043 -101823269 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 6 725 1050 97 0 0 chr13 18461043 18461177 -101823135 - B1_Mus2 SINE Alu -13 134 1 6 725 281 206 287 9 chr13 18461856 18461964 -101822348 + MLT1A0-int LTR MaLR 563 700 -687 6 725 329 281 59 42 chr13 18462166 18462285 -101822027 + MTEa LTR MaLR 1 121 -258 6 725 396 333 98 51 chr13 18462351 18462588 -101821724 + MLT2B2 LTR ERVL 228 478 -37 6 725 444 19 0 0 chr13 18462588 18462641 -101821671 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 725 396 333 98 51 chr13 18462641 18462678 -101821634 + MLT2B2 LTR ERVL 479 515 0 6 725 249 293 80 36 chr13 18462953 18463091 -101821221 + L1ME2 LINE L1 5999 6142 -22 6 725 1056 212 7 71 chr13 18464244 18464513 -101819799 + ORR1B1 LTR MaLR 27 278 -116 6 725 1254 109 43 0 chr13 18464456 18464667 -101819645 - ORR1A3-int LTR MaLR -472 1491 1272 6 725 398 246 82 18 chr13 18464659 18464829 -101819483 - ORR1A3-int LTR MaLR -1065 898 718 6 725 1210 192 47 109 chr13 18464720 18465066 -101819246 - MT2B LTR ERVL -314 287 36 6 725 521 227 18 0 chr13 18465009 18465119 -101819193 - ORR1A3-int LTR MaLR -1258 705 594 6 725 569 221 83 19 chr13 18465095 18465285 -101819027 + ORR1B1-int LTR MaLR 33 230 -1350 6 725 1313 204 94 24 chr13 18465214 18465519 -101818793 - ORR1B1 LTR MaLR -21 363 41 6 725 727 284 199 10 chr13 18466373 18466679 -101817633 + MLT1A0 LTR MaLR 1 364 -1 6 725 267 288 80 18 chr13 18466727 18466840 -101817472 - MER5A1 DNA MER1_type -1 165 46 6 725 729 194 176 10 chr13 18467738 18467931 -101816381 - URR1B DNA MER1_type 0 225 1 6 725 293 346 19 19 chr13 18468109 18468212 -101816100 + MER81 DNA AcHobo 2 104 -10 6 725 219 25 49 24 chr13 18469523 18469564 -101814748 + (TTG)n Simple_repeat Simple_repeat 2 43 0 6 725 733 201 68 73 chr13 18471257 18471434 -101812878 + B2_Mm2 SINE B2 1 176 -19 6 725 240 143 0 0 chr13 18471435 18471477 -101812835 + (TAGA)n Simple_repeat Simple_repeat 2 43 0 6 725 284 133 17 0 chr13 18471502 18471562 -101812750 + (TAAA)n Simple_repeat Simple_repeat 4 64 0 6 725 252 0 0 0 chr13 18471636 18471664 -101812648 + (TC)n Simple_repeat Simple_repeat 2 29 0 6 725 339 25 0 0 chr13 18471664 18471703 -101812609 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 725 312 27 0 0 chr13 18474099 18474136 -101810176 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 725 252 0 0 0 chr13 18474143 18474171 -101810141 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 725 2101 157 121 66 chr13 18476200 18476698 -101807614 + RLTR11A2 LTR ERVK 1 525 -2 6 725 333 0 0 0 chr13 18477215 18477252 -101807060 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 725 288 375 34 53 chr13 18478269 18478534 -101805778 + MIR SINE MIR 2 261 -1 6 725 24 67 0 0 chr13 18478548 18478593 -101805719 + AT_rich Low_complexity Low_complexity 1 45 0 6 725 856 294 38 0 chr13 18478778 18479016 -101805296 - MER2 DNA MER2_type -1 344 98 6 725 252 100 0 0 chr13 18479810 18479850 -101804462 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 725 838 61 0 42 chr13 18480140 18480259 -101804053 - B1_Mus1 SINE Alu -33 115 2 6 726 369 117 0 0 chr13 18481552 18481612 -101802700 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 726 287 37 0 129 chr13 18481733 18481857 -101802455 + T-rich Low_complexity Low_complexity 1 108 0 6 726 809 34 254 0 chr13 18481859 18481977 -101802335 - B1_Mus1 SINE Alu 0 148 1 6 726 4015 57 0 0 chr13 18482023 18482513 -101801799 - L1_Mus1 LINE L1 0 6567 6078 6 726 273 352 115 15 chr13 18482840 18482970 -101801342 - MER45C DNA Tip100 -321 632 490 6 726 234 0 0 0 chr13 18483630 18483656 -101800656 + (T)n Simple_repeat Simple_repeat 1 26 0 6 726 276 245 192 10 chr13 18483656 18483755 -101800557 - PB1D10 SINE Alu 0 117 1 6 726 193 341 44 22 chr13 18484778 18484868 -101799444 + MER5A DNA MER1_type 3 94 -95 6 726 22 0 0 0 chr13 18485906 18485928 -101798384 + AT_rich Low_complexity Low_complexity 1 22 0 6 726 287 279 108 0 chr13 18489115 18489244 -101795068 + MIR SINE MIR 81 223 -39 6 726 595 279 48 32 chr13 18489996 18490185 -101794127 + MIR SINE MIR 60 251 -11 6 726 487 242 235 29 chr13 18491397 18491610 -101792702 + B4 SINE B4 4 266 -26 6 726 246 62 0 0 chr13 18491610 18491642 -101792670 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 726 487 242 235 29 chr13 18491642 18491666 -101792646 + B4 SINE B4 267 290 -2 6 726 908 197 109 0 chr13 18493497 18493680 -101790632 + B3 SINE B2 4 206 -10 7 726 228 216 0 0 chr13 18495806 18495857 -101788455 + (CATA)n Simple_repeat Simple_repeat 4 54 0 7 726 447 352 7 7 chr13 18496096 18496239 -101788073 - MER45A DNA Tip100 -19 159 17 7 726 6050 182 24 16 chr13 18496445 18497667 -101786645 + Lx6 LINE L1 4739 5933 -1527 7 726 1911 121 36 63 chr13 18497667 18498002 -101786310 + ORR1A3 LTR MaLR 1 326 0 7 726 6050 218 98 46 chr13 18498002 18499343 -101784969 + Lx6 LINE L1 5934 7394 -66 7 726 27 0 0 0 chr13 18499351 18499378 -101784934 + AT_rich Low_complexity Low_complexity 1 27 0 7 726 735 242 21 41 chr13 18499751 18499945 -101784367 - MIRc SINE MIR -11 257 68 7 726 39 38 0 0 chr13 18500407 18500460 -101783852 + AT_rich Low_complexity Low_complexity 1 53 0 1 726 282 116 0 0 chr13 18502007 18502050 -101782262 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2 726 324 273 39 0 chr13 18503130 18503207 -101781105 - ORSL DNA Tip100 -188 87 8 3 726 374 294 306 10 chr13 18504179 18504375 -101779937 + Tigger5 DNA MER2_type 10 263 -2143 4 726 910 248 235 0 chr13 18505066 18505364 -101778948 + ORR1D2 LTR MaLR 1 368 -2 5 726 26 0 0 0 chr13 18505799 18505825 -101778487 + AT_rich Low_complexity Low_complexity 1 26 0 6 726 956 227 40 0 chr13 18505825 18506023 -101778289 - B3 SINE B2 -1 215 10 7 726 312 188 0 0 chr13 18506107 18506176 -101778136 + (TG)n Simple_repeat Simple_repeat 2 70 0 8 726 310 255 0 130 chr13 18506177 18506285 -101778027 - B4A SINE B4 0 292 199 9 726 234 274 52 78 chr13 18506349 18506464 -101777848 + MER33 DNA MER1_type 211 322 -2 1 726 180 0 0 0 chr13 18507424 18507444 -101776868 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 726 600 298 40 7 chr13 18508239 18508391 -101775921 + RSINE1 SINE B4 1 157 -8 1 726 278 87 22 0 chr13 18510389 18510435 -101773877 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 726 649 309 19 81 chr13 18511263 18511570 -101772742 - B4A SINE B4 0 292 5 1 726 808 328 77 48 chr13 18513862 18514724 -101769588 + Lx9 LINE L1 1462 2348 -3532 1 726 868 170 0 7 chr13 18514789 18514937 -101769375 + B1_Mur2 SINE Alu 3 149 0 1 726 4418 264 147 37 chr13 18514960 18516425 -101767887 + Lx9 LINE L1 2561 4280 -1600 1 726 216 0 0 0 chr13 18516425 18516449 -101767863 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 726 4418 267 126 34 chr13 18516449 18517888 -101766424 + Lx9 LINE L1 4278 6004 -1640 1 726 1683 234 45 25 chr13 18518060 18518435 -101765877 + RLTR20B2 LTR ERVK 81 455 -105 1 726 392 0 0 20 chr13 18518435 18518484 -101765828 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 726 1683 234 45 25 chr13 18518484 18518555 -101765757 + RLTR20B2 LTR ERVK 456 536 -24 1 726 4553 201 128 8 chr13 18518577 18519658 -101764654 + Lx9 LINE L1 6307 7516 -128 1 726 721 318 15 19 chr13 18519663 18519923 -101764389 - Lx8 LINE L1 -803 6670 6412 2 726 368 181 0 45 chr13 18519927 18520037 -101764275 + Lx9 LINE L1 7533 7637 -7 1 726 855 245 27 50 chr13 18520059 18520317 -101763995 + L1_Mur3 LINE L1 5313 5564 -316 2 726 2518 305 72 42 chr13 18520428 18521546 -101762766 + Lx8 LINE L1 6081 7232 -241 2 726 235 145 247 24 chr13 18521624 18521709 -101762603 + Lx8 LINE L1 7361 7464 -9 2 726 250 247 151 13 chr13 18522694 18522846 -101761466 - L1MA6 LINE L1 -21 6270 6098 2 726 361 213 64 0 chr13 18522965 18523059 -101761253 - L1MA6 LINE L1 -407 5893 5794 2 726 293 255 9 38 chr13 18523091 18523197 -101761115 - L1MA6 LINE L1 -573 5727 5625 2 726 2187 104 122 0 chr13 18523266 18523594 -101760718 + RLTR9A LTR ERVK 1 368 0 2 726 21 0 0 0 chr13 18525084 18525105 -101759207 + AT_rich Low_complexity Low_complexity 1 21 0 2 726 396 0 0 0 chr13 18525974 18526018 -101758294 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 726 583 129 15 0 chr13 18526019 18526151 -101758161 + (GA)n Simple_repeat Simple_repeat 1 134 0 2 726 376 274 11 49 chr13 18526629 18526813 -101757499 + CT-rich Low_complexity Low_complexity 4 180 0 2 726 245 225 25 12 chr13 18526873 18526954 -101757358 + CT-rich Low_complexity Low_complexity 3 84 0 2 726 180 0 0 0 chr13 18526969 18526989 -101757323 + (CAT)n Simple_repeat Simple_repeat 1 20 0 3 726 289 250 141 34 chr13 18527149 18527298 -101757014 + RLTR15 LTR ERVK 1 165 -194 3 726 252 304 109 34 chr13 18527293 18527531 -101756781 + RLTR15 LTR ERVK 86 341 -18 3 726 1242 307 69 52 chr13 18527816 18528355 -101755957 + MLT2B3 LTR ERVL 3 550 -4 3 726 280 350 38 0 chr13 18528411 18528491 -101755821 + B1F SINE Alu 1 83 -66 3 726 195 330 74 11 chr13 18528718 18528813 -101755499 - MIRb SINE MIR -54 214 114 3 726 26 0 0 0 chr13 18529263 18529289 -101755023 + AT_rich Low_complexity Low_complexity 1 26 0 3 726 22 35 0 0 chr13 18529400 18529429 -101754883 + AT_rich Low_complexity Low_complexity 1 29 0 3 726 582 118 0 0 chr13 18530428 18530521 -101753791 + (TG)n Simple_repeat Simple_repeat 2 94 0 3 726 22 70 0 0 chr13 18531086 18531129 -101753183 + AT_rich Low_complexity Low_complexity 1 43 0 3 726 360 0 0 0 chr13 18536950 18536990 -101747322 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 726 454 314 40 16 chr13 18536995 18537121 -101747191 - RSINE1 SINE B4 -35 130 2 4 726 504 48 0 0 chr13 18537476 18537539 -101746773 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 726 450 243 88 38 chr13 18537598 18537813 -101746499 + RLTR16 LTR ERVK 32 274 -254 4 726 252 69 16 65 chr13 18537903 18537965 -101746347 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 4 726 189 0 0 0 chr13 18538524 18538545 -101745767 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 4 726 1166 35 14 0 chr13 18538550 18538693 -101745619 - B1_Mus2 SINE Alu -1 146 2 4 726 741 77 256 0 chr13 18539172 18539289 -101745023 + B1_Mus1 SINE Alu 2 148 0 4 726 255 103 0 0 chr13 18539470 18539509 -101744803 + (TATG)n Simple_repeat Simple_repeat 2 40 0 4 726 434 313 68 30 chr13 18541088 18541322 -101742990 + MLT1D LTR MaLR 7 249 -256 4 726 4467 55 2 18 chr13 18541399 18541972 -101742340 - L1Md_F2 LINE L1 -1 6581 6018 5 726 471 294 91 72 chr13 18542246 18542521 -101741791 - MLT1A LTR MaLR -4 404 92 5 726 819 259 158 49 chr13 18542523 18542697 -101741615 - ORR1D2 LTR MaLR 0 370 168 5 726 441 0 0 0 chr13 18542697 18542746 -101741566 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 726 819 259 158 49 chr13 18542746 18542900 -101741412 - ORR1D2 LTR MaLR -203 167 6 5 726 234 180 48 16 chr13 18542979 18543041 -101741271 + Lx6 LINE L1 7392 7455 -5 5 726 502 357 41 0 chr13 18543366 18543537 -101740775 - MER45A DNA Tip100 0 178 1 5 726 1206 243 53 24 chr13 18545186 18545600 -101738712 + L1_Rod LINE L1 4828 5253 -594 5 726 363 308 98 50 chr13 18545639 18546001 -101738311 - L1MD LINE L1 -1741 4405 4028 5 726 399 41 0 0 chr13 18546779 18546828 -101737484 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 726 450 36 0 0 chr13 18546840 18546896 -101737416 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 726 887 308 55 4 chr13 18546915 18547169 -101737143 - B4A SINE B4 -23 269 3 6 726 431 274 123 13 chr13 18547172 18547327 -101736985 + MER5A DNA MER1_type 17 188 -1 6 726 1698 21 0 0 chr13 18549990 18550182 -101734130 - B2_Mm1a SINE B2 0 193 2 6 726 510 165 0 0 chr13 18550616 18550743 -101733569 + CT-rich Low_complexity Low_complexity 1 127 0 6 726 443 203 29 96 chr13 18550870 18551006 -101733306 - RLTR9E LTR ERVK 0 409 283 6 726 1188 55 7 0 chr13 18551027 18551173 -101733139 - B1_Mus2 SINE Alu 0 147 1 6 726 552 15 0 0 chr13 18551192 18551257 -101733055 + (GA)n Simple_repeat Simple_repeat 2 66 0 6 726 222 118 0 0 chr13 18552624 18552658 -101731654 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 6 726 648 203 78 0 chr13 18552703 18552831 -101731481 + ID_B1 SINE B4 86 223 -1 6 726 227 333 35 35 chr13 18552915 18553058 -101731254 + MER33 DNA MER1_type 1 143 -181 6 726 459 265 192 6 chr13 18553078 18553260 -101731052 + B3 SINE B2 1 216 0 7 726 258 244 12 24 chr13 18553400 18553484 -101730828 + MER33 DNA MER1_type 216 298 -26 6 726 198 71 0 0 chr13 18554528 18554556 -101729756 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 7 726 241 250 19 0 chr13 18554741 18554805 -101729507 + CT-rich Low_complexity Low_complexity 1 65 0 7 726 256 243 12 86 chr13 18556971 18557052 -101727260 - MIRm SINE MIR -114 162 88 7 726 232 196 0 21 chr13 18558122 18558169 -101726143 + CT-rich Low_complexity Low_complexity 1 46 0 7 726 3502 23 0 0 chr13 18559270 18559666 -101724646 + MTA_Mm LTR MaLR 1 396 0 7 726 225 187 0 39 chr13 18561631 18561692 -101722620 + CT-rich Low_complexity Low_complexity 17 75 0 7 726 1158 122 0 0 chr13 18561692 18561872 -101722440 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 726 225 187 0 39 chr13 18561872 18561888 -101722424 + polypyrimidine Low_complexity Low_complexity 1 16 0 7 726 346 343 7 48 chr13 18561937 18561961 -101722351 - ID_B1 SINE B4 0 224 84 7 726 478 273 41 16 chr13 18561961 18562084 -101722228 - B1F SINE Alu -21 128 3 8 726 256 300 70 0 chr13 18562161 18562261 -101722051 + B1F1 SINE Alu 43 149 0 8 726 534 16 0 0 chr13 18563017 18563080 -101721232 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 726 378 129 0 0 chr13 18563206 18563268 -101721044 + (GA)n Simple_repeat Simple_repeat 1 62 0 8 726 22 56 0 0 chr13 18563721 18563757 -101720555 + AT_rich Low_complexity Low_complexity 1 36 0 8 726 221 220 17 17 chr13 18564034 18564094 -101720218 + (TATG)n Simple_repeat Simple_repeat 3 62 0 8 726 520 321 86 19 chr13 18564095 18564362 -101719950 - B4A SINE B4 -7 285 1 8 726 680 329 108 21 chr13 18565719 18566107 -101718205 - MER63C DNA AcHobo -243 687 266 8 726 259 294 16 56 chr13 18566289 18566415 -101717897 - MER63C DNA AcHobo -745 185 65 8 726 202 289 254 0 chr13 18567679 18567821 -101716491 - MIR SINE MIR -28 234 57 8 726 360 77 0 0 chr13 18568022 18568074 -101716238 + (T)n Simple_repeat Simple_repeat 1 52 0 8 726 566 223 157 63 chr13 18568742 18568933 -101715379 + B3 SINE B2 2 210 -6 9 726 714 298 89 8 chr13 18569363 18569600 -101714712 - MTD LTR MaLR -146 273 18 9 726 492 18 0 0 chr13 18569600 18569657 -101714655 + (TG)n Simple_repeat Simple_repeat 1 57 0 9 726 417 54 0 0 chr13 18569657 18569713 -101714599 + (GA)n Simple_repeat Simple_repeat 2 57 0 9 726 224 192 0 37 chr13 18570258 18570312 -101714000 + (CATA)n Simple_repeat Simple_repeat 4 55 0 9 726 200 284 0 29 chr13 18570312 18570381 -101713931 + (TCTCTG)n Simple_repeat Simple_repeat 4 70 0 9 726 4303 98 5 7 chr13 18571597 18572214 -101712098 + L1Md_F2 LINE L1 5966 6581 -1 9 726 622 101 18 0 chr13 18572288 18572397 -101711915 + (TC)n Simple_repeat Simple_repeat 1 111 0 9 726 247 312 122 102 chr13 18572402 18572863 -101711449 + MLT1F1 LTR MaLR 96 565 -4 9 726 937 255 5 5 chr13 18574147 18574352 -101709960 - B3 SINE B2 -11 205 1 9 726 270 235 51 9 chr13 18574359 18574475 -101709837 - L1MA7 LINE L1 -1 6290 6176 1 726 326 307 46 0 chr13 18575204 18575357 -101708955 - L1MA7 LINE L1 -132 6159 6000 1 726 370 312 47 31 chr13 18575565 18575694 -101708618 + RSINE1 SINE B4 6 136 -29 1 726 257 266 123 15 chr13 18575770 18575835 -101708477 + B1F SINE Alu 68 139 -10 1 726 245 208 0 0 chr13 18576681 18576729 -101707583 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 726 216 0 0 0 chr13 18577465 18577489 -101706823 + (A)n Simple_repeat Simple_repeat 1 24 0 1 726 2363 124 5 16 chr13 18577761 18578145 -101706167 + RLTR9E LTR ERVK 1 380 -29 1 726 269 253 60 12 chr13 18578594 18578678 -101705634 + MIRm SINE MIR 183 270 -6 1 726 266 0 29 0 chr13 18578810 18578844 -101705468 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 726 26 0 0 0 chr13 18579780 18579806 -101704506 + AT_rich Low_complexity Low_complexity 1 26 0 1 726 198 0 0 0 chr13 18580400 18580422 -101703890 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 726 405 0 0 0 chr13 18580422 18580466 -101703846 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 726 22 0 0 0 chr13 18582079 18582101 -101702211 + AT_rich Low_complexity Low_complexity 1 22 0 1 726 1011 80 65 0 chr13 18582111 18582249 -101702063 + B1_Mus2 SINE Alu 1 147 0 1 726 22 35 0 0 chr13 18582325 18582354 -101701958 + AT_rich Low_complexity Low_complexity 1 29 0 1 726 207 0 0 0 chr13 18584011 18584034 -101700278 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 726 22 0 0 0 chr13 18584169 18584191 -101700121 + AT_rich Low_complexity Low_complexity 1 22 0 1 726 543 141 0 0 chr13 18585280 18585372 -101698940 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 726 264 238 117 74 chr13 18586004 18586167 -101698145 - LFSINE_Vert SINE SINE -40 419 250 1 726 22 35 0 0 chr13 18589276 18589305 -101695007 + AT_rich Low_complexity Low_complexity 1 29 0 1 726 420 149 0 0 chr13 18590275 18590324 -101693988 + (A)n Simple_repeat Simple_repeat 1 49 0 1 726 771 36 18 0 chr13 18590324 18590472 -101693840 + L1Md_A LINE L1 6470 6582 0 1 726 524 191 100 29 chr13 18592928 18593068 -101691244 + B2_Mm2 SINE B2 46 195 0 1 726 610 260 132 6 chr13 18594187 18594361 -101689951 - B3A SINE B2 -2 196 1 1 726 383 280 80 40 chr13 18595317 18595518 -101688794 + MIR SINE MIR 28 236 -26 1 726 21 36 0 0 chr13 18597839 18597867 -101686445 + AT_rich Low_complexity Low_complexity 1 28 0 1 726 196 304 99 57 chr13 18598081 18598273 -101686039 - L2a LINE L2 -9 3417 3218 1 726 614 222 111 5 chr13 18598283 18598482 -101685830 - MER2 DNA MER2_type -54 291 72 1 726 300 53 0 0 chr13 18598497 18598535 -101685777 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 726 463 282 21 97 chr13 18598545 18598690 -101685622 - RSINE1 SINE B4 -29 136 3 1 726 6171 220 51 19 chr13 18599444 18601405 -101682907 + Lx5 LINE L1 4455 6695 -765 1 726 888 27 18 0 chr13 18601427 18601537 -101682775 + L1_Mus4 LINE L1 5686 5797 -839 1 726 225 65 0 0 chr13 18601729 18601760 -101682552 + (T)n Simple_repeat Simple_repeat 1 31 0 1 726 823 76 8 0 chr13 18601760 18601878 -101682434 + Lx2 LINE L1 6154 6272 -725 1 726 1018 44 29 7 chr13 18601878 18602014 -101682298 - RLTR45 LTR ERVK 0 482 344 1 726 247 267 96 29 chr13 18602070 18602174 -101682138 - PB1D7 SINE Alu -9 111 1 1 726 327 248 143 0 chr13 18602805 18602966 -101681346 - L1M5 LINE L1 -632 5492 5309 1 726 398 212 30 12 chr13 18603064 18603231 -101681081 + (TA)n Simple_repeat Simple_repeat 2 171 0 1 726 25 51 0 0 chr13 18603525 18603564 -101680748 + AT_rich Low_complexity Low_complexity 1 39 0 1 726 201 147 0 0 chr13 18603716 18603750 -101680562 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 726 3782 100 33 17 chr13 18603933 18604533 -101679779 - Lx3B LINE L1 -542 6431 5822 1 726 210 37 0 0 chr13 18604637 18604664 -101679648 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 726 23 68 0 0 chr13 18604876 18604920 -101679392 + AT_rich Low_complexity Low_complexity 1 44 0 1 726 296 272 123 0 chr13 18604943 18605024 -101679288 + PB1D7 SINE Alu 18 108 -12 1 726 326 332 59 46 chr13 18605309 18605681 -101678631 - L1M6 LINE L1 -4670 1826 1450 1 726 309 26 0 0 chr13 18606370 18606408 -101677904 + (TTTG)n Simple_repeat Simple_repeat 4 41 0 1 726 384 285 38 23 chr13 18606424 18606557 -101677755 - B1F2 SINE Alu -14 135 1 1 726 2461 298 106 59 chr13 18606885 18608177 -101676135 + Charlie1a DNA MER1_type 7 1362 -93 1 726 836 85 248 0 chr13 18608177 18608330 -101675982 + B2_Mm2 SINE B2 3 193 -2 1 726 2461 298 106 59 chr13 18608330 18608386 -101675926 + Charlie1a DNA MER1_type 1363 1419 -36 1 726 656 315 78 18 chr13 18608424 18608641 -101675671 + B4 SINE B4 40 269 -23 1 726 294 221 25 25 chr13 18608692 18608771 -101675541 + GA-rich Low_complexity Low_complexity 3 81 0 1 726 225 132 0 0 chr13 18608823 18608861 -101675451 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1 726 232 286 84 38 chr13 18609089 18609220 -101675092 - L1MB7 LINE L1 -20 6164 6028 1 726 250 269 139 0 chr13 18609362 18609470 -101674842 - L1MB7 LINE L1 -409 5775 5653 1 726 421 302 0 8 chr13 18609781 18609901 -101674411 - L1MB7 LINE L1 -623 5555 5437 1 726 783 211 7 13 chr13 18610256 18610405 -101673907 + B1_Mur4 SINE Alu 3 150 0 1 726 27 87 0 0 chr13 18610514 18610583 -101673729 + AT_rich Low_complexity Low_complexity 1 69 0 1 726 3441 20 2 0 chr13 18611276 18611671 -101672641 - MTA_Mm LTR MaLR 0 396 1 1 90 798 323 53 11 chr13 18612079 18612342 -101671970 + MTD LTR MaLR 1 274 -145 1 727 772 229 7 0 chr13 18612359 18612512 -101671800 + ORR1B2 LTR MaLR 1 154 -213 1 727 230 294 88 0 chr13 18612519 18612587 -101671725 + Lx8 LINE L1 7199 7272 -201 1 727 1317 108 0 5 chr13 18612772 18612958 -101671354 - B2_Mm2 SINE B2 -9 186 2 1 727 510 228 0 0 chr13 18613108 18613200 -101671112 + MT2A LTR ERVL 1 92 -441 1 727 870 239 74 138 chr13 18613192 18613542 -101670770 + MT2A LTR ERVL 13 470 -131 1 727 252 0 0 0 chr13 18613542 18613570 -101670742 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 727 537 276 21 166 chr13 18613570 18613601 -101670711 + MT2A LTR ERVL 457 481 -103 1 727 220 346 30 59 chr13 18613674 18613843 -101670469 + MIRb SINE MIR 77 240 -28 1 727 786 269 74 138 chr13 18614185 18614647 -101669665 + RLTR12B LTR ERVK 53 484 -44 1 727 306 284 55 12 chr13 18616000 18616162 -101668150 + L1M4 LINE L1 2729 2897 -3249 1 727 312 293 65 0 chr13 18616448 18616571 -101667741 + L1M4 LINE L1 3312 3442 -2704 1 727 365 314 80 11 chr13 18616648 18616835 -101667477 + L1M4 LINE L1 3687 3886 -2260 1 727 33 80 0 0 chr13 18616872 18616947 -101667365 + AT_rich Low_complexity Low_complexity 1 75 0 1 727 254 237 0 13 chr13 18617081 18617158 -101667154 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 727 351 0 0 0 chr13 18617159 18617198 -101667114 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 727 189 0 0 0 chr13 18617312 18617333 -101666979 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 727 769 316 50 21 chr13 18617353 18617592 -101666720 - B4 SINE B4 -6 286 41 1 727 657 231 120 43 chr13 18617617 18617901 -101666411 - L1M2 LINE L1 -865 5278 4977 1 727 180 0 0 0 chr13 18617901 18617921 -101666391 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 727 657 231 120 43 chr13 18617921 18617985 -101666327 - L1M2 LINE L1 -1167 4976 4905 1 727 304 188 85 24 chr13 18617983 18618065 -101666247 + L1MA6 LINE L1 6041 6127 -173 1 727 306 345 48 95 chr13 18618092 18618107 -101666205 + B4A SINE B4 67 139 -153 1 727 675 245 7 52 chr13 18618107 18618262 -101666050 + B1_Mur2 SINE Alu 2 149 0 1 727 306 345 48 95 chr13 18618262 18618281 -101666031 + B4A SINE B4 140 246 -46 1 727 284 200 33 0 chr13 18618454 18618514 -101665798 - U2 snRNA snRNA -126 62 1 1 727 243 146 0 0 chr13 18618670 18618711 -101665601 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 727 2602 274 63 62 chr13 18618819 18619048 -101665264 + Lx9 LINE L1 6382 6611 -1033 1 727 1509 58 0 0 chr13 18619048 18619239 -101665073 + B2_Mm1t SINE B2 3 193 0 1 727 2602 274 63 62 chr13 18619239 18619911 -101664401 + Lx9 LINE L1 6612 7283 -361 1 727 22 56 0 0 chr13 18620104 18620140 -101664172 + AT_rich Low_complexity Low_complexity 1 36 0 1 727 3781 207 28 51 chr13 18620163 18621085 -101663227 - Lx9 LINE L1 -31 7613 6713 1 727 353 279 79 48 chr13 18621166 18621457 -101662855 + L1M4 LINE L1 5185 5484 -690 1 727 564 311 33 33 chr13 18621464 18621647 -101662665 + B3A SINE B2 15 197 -1 1 727 460 275 94 38 chr13 18621660 18621947 -101662365 + L1M4 LINE L1 5474 5776 -403 1 727 332 385 55 8 chr13 18621955 18622191 -101662121 + L1MB8 LINE L1 5919 6165 -13 1 727 26324 87 12 16 chr13 18623549 18628037 -101656275 + L1Md_F2 LINE L1 383 4831 -1055 1 727 8209 32 1 0 chr13 18628049 18629221 -101655091 - L1Md_T LINE L1 -11 6571 5398 1 727 310 250 21 11 chr13 18629228 18629321 -101654991 + (TA)n Simple_repeat Simple_repeat 2 95 0 1 727 1136 64 0 0 chr13 18629321 18629462 -101654850 - L1Md_F2 LINE L1 -421 6161 6021 1 727 5383 80 15 0 chr13 18629462 18630202 -101654110 + L1Md_F2 LINE L1 4838 5588 -298 1 727 7777 61 1 6 chr13 18630203 18631192 -101653120 + L1Md_F2 LINE L1 5590 6573 -12 1 727 674 286 23 27 chr13 18631511 18631730 -101652582 - Tigger5 DNA MER2_type -26 2380 2163 1 727 482 347 47 30 chr13 18631721 18631953 -101652359 - Tigger5 DNA MER2_type -2149 257 22 1 727 249 210 123 57 chr13 18632755 18632861 -101651451 + L1MA4 LINE L1 5807 5919 -381 1 727 249 361 114 8 chr13 18633336 18633459 -101650853 - MLT1J2 LTR MaLR -16 432 297 1 727 1331 81 21 5 chr13 18634097 18634284 -101650028 + B2_Mm1t SINE B2 2 191 -2 1 727 26 0 0 0 chr13 18634284 18634310 -101650002 + AT_rich Low_complexity Low_complexity 1 26 0 1 727 378 0 0 0 chr13 18635060 18635102 -101649210 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 727 288 0 0 0 chr13 18635102 18635133 -101649179 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 727 1788 164 36 0 chr13 18635663 18635967 -101648345 - ORR1A4 LTR MaLR 0 329 15 1 727 306 0 0 0 chr13 18636179 18636213 -101648099 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 727 555 208 0 0 chr13 18637241 18637496 -101646816 + (TG)n Simple_repeat Simple_repeat 1 255 0 1 727 546 314 134 7 chr13 18638194 18638499 -101645813 + MER2 DNA MER2_type 1 344 -1 1 727 8598 65 13 4 chr13 18638775 18640531 -101643781 - L1Md_F2 LINE L1 -19 6563 4788 1 727 445 344 54 14 chr13 18641574 18641851 -101642461 + B4A SINE B4 1 288 -4 1 727 3010 134 24 8 chr13 18642058 18642554 -101641758 + Lx LINE L1 6151 6654 0 2 727 1614 31 0 20 chr13 18646004 18646201 -101638111 + B2_Mm1a SINE B2 1 193 0 2 727 813 69 8 30 chr13 18646567 18646701 -101637611 - L1Md_F2 LINE L1 0 6582 6452 2 727 189 107 0 0 chr13 18646702 18646730 -101637582 + (A)n Simple_repeat Simple_repeat 1 28 0 2 727 248 257 0 34 chr13 18647813 18647990 -101636322 + (TG)n Simple_repeat Simple_repeat 2 172 0 2 727 719 283 0 26 chr13 18648043 18648062 -101636250 - B3A SINE B2 -8 190 173 2 727 814 28 28 0 chr13 18648062 18648170 -101636142 + (TCTA)n Simple_repeat Simple_repeat 2 112 0 2 727 719 283 0 26 chr13 18648170 18648342 -101635970 - B3A SINE B2 -26 172 5 2 727 516 146 0 0 chr13 18648579 18648668 -101635644 + (TCC)n Simple_repeat Simple_repeat 2 90 0 2 727 303 28 0 0 chr13 18648762 18648798 -101635514 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 727 21 0 0 0 chr13 18649588 18649609 -101634703 + AT_rich Low_complexity Low_complexity 1 21 0 2 727 287 213 258 8 chr13 18649762 18649890 -101634422 - Lx9 LINE L1 -73 7571 7412 2 727 350 215 55 27 chr13 18649933 18650043 -101634269 - L1MA4 LINE L1 -46 6254 6142 2 727 498 75 0 0 chr13 18650703 18650770 -101633542 + (CA)n Simple_repeat Simple_repeat 1 67 0 2 727 349 303 61 0 chr13 18651118 18651250 -101633062 + L2 LINE L2 1996 2135 -1284 2 727 374 322 69 73 chr13 18651386 18651631 -101632681 + MLT1F LTR MaLR 265 508 -40 2 727 258 56 0 0 chr13 18651853 18651889 -101632423 + (CTG)n Simple_repeat Simple_repeat 1 36 0 2 727 713 214 201 60 chr13 18651900 18652179 -101632133 + RMER4B LTR ERVK 343 588 -23 2 727 270 0 0 0 chr13 18652265 18652295 -101632017 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 727 398 240 75 57 chr13 18652698 18652857 -101631455 + RSINE1 SINE B4 3 164 -1 2 727 23 92 0 0 chr13 18653247 18653312 -101631000 + AT_rich Low_complexity Low_complexity 1 65 0 2 727 388 294 58 40 chr13 18653382 18653658 -101630654 + L1M5 LINE L1 3705 3985 -2161 2 727 332 336 82 0 chr13 18653733 18653867 -101630445 + Lx8 LINE L1 7116 7260 -213 2 727 779 300 17 13 chr13 18654142 18654372 -101629940 + B4A SINE B4 2 232 -60 2 727 578 298 7 0 chr13 18654382 18654533 -101629779 - Lx8 LINE L1 -312 7161 7010 2 727 277 224 132 0 chr13 18654734 18654810 -101629502 + B4A SINE B4 201 286 -6 2 727 374 318 126 11 chr13 18655319 18655494 -101628818 + B3A SINE B2 1 195 -3 2 727 486 306 48 19 chr13 18655628 18655919 -101628393 + L1M5 LINE L1 5317 5616 -546 2 727 864 241 9 76 chr13 18655952 18656022 -101628290 + B3 SINE B2 2 56 -160 2 727 5271 53 0 12 chr13 18656022 18656692 -101627620 - L1Md_F2 LINE L1 0 6582 5921 2 727 864 241 9 76 chr13 18656692 18656845 -101627467 + B3 SINE B2 57 210 -6 2 727 203 250 21 0 chr13 18657875 18657923 -101626389 + MIRc SINE MIR 113 161 -107 2 727 4558 60 0 3 chr13 18658230 18658802 -101625510 + L1_Mus1 LINE L1 5996 6565 -2 2 727 549 262 41 41 chr13 18658864 18659011 -101625301 + B4 SINE B4 142 288 -4 2 727 1067 254 98 48 chr13 18659348 18659683 -101624629 + Lx8 LINE L1 6270 6621 -852 2 727 1983 112 20 3 chr13 18659684 18659980 -101624332 + ORR1A2 LTR MaLR 7 307 -20 2 727 1655 297 95 14 chr13 18659989 18660569 -101623743 + Lx8 LINE L1 6623 7249 -224 2 727 304 259 22 11 chr13 18660552 18660642 -101623670 + L1M5 LINE L1 5611 5701 -743 2 727 361 289 72 21 chr13 18660809 18661003 -101623309 + L1_Rod LINE L1 1701 1904 -3943 2 727 373 329 51 38 chr13 18661213 18661526 -101622786 + L1M2 LINE L1 2145 2461 -3682 2 727 2245 152 6 6 chr13 18661527 18661884 -101622428 + MTC LTR MaLR 1 357 -64 2 727 1741 289 95 53 chr13 18661917 18662631 -101621681 - Lx9 LINE L1 -555 7089 6204 2 727 396 0 0 0 chr13 18662631 18662675 -101621637 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 727 1306 336 113 53 chr13 18662675 18663058 -101621254 - Lx9 LINE L1 -1270 6203 5794 2 727 605 298 68 11 chr13 18663889 18664154 -101620158 + HAL1 LINE L1 1387 1666 -841 2 727 1142 276 60 83 chr13 18664244 18664592 -101619720 - MTE2b LTR MaLR -39 340 1 2 727 1873 278 100 34 chr13 18664628 18665325 -101618987 + Lx8 LINE L1 6320 7062 -411 2 727 2345 181 198 25 chr13 18665328 18665849 -101618463 - RMER19C LTR ERVK 0 611 1 2 727 305 167 16 62 chr13 18665893 18665957 -101618355 + HAL1 LINE L1 1974 2034 -824 2 727 252 137 0 0 chr13 18665959 18666010 -101618302 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 727 636 269 76 116 chr13 18666620 18666805 -101617507 + B3A SINE B2 1 179 -16 2 727 1029 65 7 0 chr13 18666805 18666944 -101617368 + L1_Mus1 LINE L1 6428 6567 0 2 727 401 269 76 116 chr13 18666944 18666956 -101617356 + B2_Mm2 SINE B2 180 190 -5 2 727 292 367 116 20 chr13 18667296 18667546 -101616766 - L2 LINE L2 -337 3082 2809 2 727 225 0 0 0 chr13 18667936 18667961 -101616351 + (T)n Simple_repeat Simple_repeat 1 25 0 2 727 1902 150 55 9 chr13 18667973 18668317 -101615995 + ORR1B1 LTR MaLR 35 394 0 2 727 1323 69 0 0 chr13 18670304 18670479 -101613833 + (TCTCC)n Simple_repeat Simple_repeat 5 179 0 2 727 537 16 0 0 chr13 18670479 18670540 -101613772 + (TTTTC)n Simple_repeat Simple_repeat 4 65 0 2 727 272 304 13 0 chr13 18671728 18671807 -101612505 - PB1D9 SINE Alu -40 80 1 2 727 552 30 0 0 chr13 18672514 18672580 -101611732 + (GGAA)n Simple_repeat Simple_repeat 4 69 0 2 727 547 256 33 0 chr13 18674045 18674166 -101610146 - B3 SINE B2 -91 125 1 2 727 23 0 0 0 chr13 18674577 18674600 -101609712 + AT_rich Low_complexity Low_complexity 1 23 0 2 727 2547 249 133 12 chr13 18675048 18676068 -101608244 - L1_Mur3 LINE L1 -613 5267 4124 2 727 1205 155 20 73 chr13 18676072 18676276 -101608036 + RMER17C LTR ERVK 3 187 -223 2 727 1011 61 0 0 chr13 18676276 18676407 -101607905 + (TCC)n Simple_repeat Simple_repeat 2 132 0 2 727 1205 155 20 73 chr13 18676407 18676502 -101607810 + RMER17C LTR ERVK 188 285 -125 2 727 436 250 174 0 chr13 18676533 18676705 -101607607 - L1_Mur3 LINE L1 -1758 4122 3921 2 727 1406 251 105 2 chr13 18676728 18677234 -101607078 + Lx8 LINE L1 5281 5838 -42 2 727 262 217 0 78 chr13 18677331 18677421 -101606891 + Lx8 LINE L1 5879 5961 -1512 2 727 24 0 0 0 chr13 18677449 18677473 -101606839 + AT_rich Low_complexity Low_complexity 1 24 0 2 727 673 83 213 29 chr13 18677556 18677692 -101606620 - RMER17C LTR ERVK 0 410 250 2 727 728 153 53 8 chr13 18677761 18677893 -101606419 - B1_Mus2 SINE Alu -1 146 9 2 727 2451 76 35 3 chr13 18677850 18678219 -101606093 + BGLII LTR ERVK 40 420 -1 2 727 686 113 25 1 chr13 18678224 18678350 -101605962 - RMER17C LTR ERVK -295 115 1 2 727 7744 40 7 1 chr13 18678419 18679769 -101604543 - L1Md_F2 LINE L1 0 6582 5238 2 727 406 297 6 62 chr13 18680676 18680852 -101603460 + HAL1-2a_MD LINE L1 2345 2510 -514 2 727 1169 104 34 23 chr13 18683482 18683659 -101600653 + B2_Mm1t SINE B2 1 179 -14 2 727 361 93 0 18 chr13 18683689 18683744 -101600568 + B2_Mm2 SINE B2 47 100 -95 2 727 183 80 0 0 chr13 18683783 18683808 -101600504 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 2 727 866 24 94 8 chr13 18683886 18684014 -101600298 + L1Md_F3 LINE L1 6432 6570 -14 2 727 203 293 70 47 chr13 18684640 18684726 -101599586 - L2c LINE L2 -13 3374 3287 2 727 473 340 42 33 chr13 18686657 18686870 -101597442 + B3 SINE B2 2 216 0 2 727 242 231 88 25 chr13 18687350 18687430 -101596882 + PB1D9 SINE Alu 35 119 -1 2 727 486 239 104 5 chr13 18687516 18687709 -101596603 + L1MA6 LINE L1 6084 6295 -5 2 727 1197 327 50 37 chr13 18687942 18688088 -101596224 - Lx8 LINE L1 -4 7469 7331 2 727 1819 152 142 33 chr13 18688088 18688455 -101595857 - MTB_Mm LTR MaLR 0 407 1 2 727 1197 327 50 37 chr13 18688455 18688984 -101595328 - Lx8 LINE L1 -143 7330 6785 2 727 356 309 20 30 chr13 18688984 18689084 -101595228 + RSINE1 SINE B4 2 100 -65 2 727 628 269 6 24 chr13 18689876 18690040 -101594272 + RSINE1 SINE B4 3 163 -2 2 727 432 0 0 0 chr13 18690040 18690088 -101594224 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 727 249 33 0 0 chr13 18690088 18690117 -101594195 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 727 189 0 0 0 chr13 18690520 18690541 -101593771 + (TA)n Simple_repeat Simple_repeat 2 22 0 2 727 210 150 0 0 chr13 18690724 18690764 -101593548 + (A)n Simple_repeat Simple_repeat 1 40 0 2 727 1619 215 90 15 chr13 18691999 18692147 -101592165 + RMER1A Other Other 250 419 -611 2 727 3368 28 5 0 chr13 18692147 18692541 -101591771 - MTA_Mm LTR MaLR 0 396 1 2 727 1619 215 90 15 chr13 18692541 18692794 -101591518 + RMER1A Other Other 420 680 -350 2 727 234 0 0 0 chr13 18692923 18692949 -101591363 + (A)n Simple_repeat Simple_repeat 1 26 0 2 727 627 51 0 0 chr13 18693200 18693279 -101591033 + (CA)n Simple_repeat Simple_repeat 2 80 0 2 727 300 230 66 25 chr13 18693948 18694060 -101590252 + MIR SINE MIR 108 221 -47 2 727 378 0 0 0 chr13 18694142 18694184 -101590128 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 727 297 341 12 0 chr13 18694193 18694278 -101590034 - B3A SINE B2 -20 178 93 2 727 198 239 21 42 chr13 18694625 18694673 -101589639 + MER5B DNA MER1_type 129 175 -3 2 727 2135 162 35 8 chr13 18695725 18696091 -101588221 - MTC LTR MaLR 0 421 46 2 727 2152 148 126 11 chr13 18696090 18696526 -101587786 + MTC-int LTR MaLR 773 1258 0 2 727 1624 190 19 9 chr13 18696526 18696873 -101587439 + MTC LTR MaLR 1 420 -1 2 727 457 252 41 123 chr13 18697032 18697154 -101587158 + PB1 SINE Alu 1 112 -5 2 727 23 0 0 0 chr13 18697379 18697402 -101586910 + AT_rich Low_complexity Low_complexity 1 23 0 2 727 519 17 0 0 chr13 18699319 18699379 -101584933 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 727 250 254 32 0 chr13 18700300 18700363 -101583949 + GA-rich Low_complexity Low_complexity 2 66 0 2 727 378 0 0 0 chr13 18706480 18706522 -101577790 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 727 187 255 70 60 chr13 18707328 18707428 -101576884 - MIRb SINE MIR -34 234 134 2 727 333 0 0 0 chr13 18707431 18707468 -101576844 + (A)n Simple_repeat Simple_repeat 1 37 0 2 727 191 329 57 0 chr13 18707572 18707642 -101576670 - L2a LINE L2 -14 3412 3339 2 727 639 322 82 43 chr13 18710184 18710209 -101574103 + Charlie1b DNA MER1_type 22 40 -483 2 727 1917 104 12 62 chr13 18710209 18710548 -101573764 - RLTRETN_Mm LTR ERVK 0 322 1 2 727 639 322 82 43 chr13 18710548 18710983 -101573329 + Charlie1b DNA MER1_type 41 499 -24 2 727 198 0 0 0 chr13 18711255 18711277 -101573035 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3 727 973 99 0 0 chr13 18711679 18711820 -101572492 - L1Md_F3 LINE L1 -1707 4176 4036 3 727 10240 62 3 10 chr13 18711821 18713229 -101571083 + L1Md_F3 LINE L1 4189 5586 -297 3 727 7685 42 40 4 chr13 18713229 18714192 -101570120 + L1Md_F3 LINE L1 5587 6584 0 3 727 2570 59 3 3 chr13 18714197 18714539 -101569773 + L1Md_F2 LINE L1 5245 5586 -297 3 727 7363 78 8 1 chr13 18714539 18715515 -101568797 + L1Md_F2 LINE L1 5587 6569 -13 3 727 1600 215 61 40 chr13 18715981 18716408 -101567904 + RMER5 LTR ERV1 75 510 -24 3 727 386 347 72 43 chr13 18716926 18717230 -101567082 + L2 LINE L2 1238 1550 -1869 3 727 359 351 126 23 chr13 18717677 18718027 -101566285 + L2 LINE L2 1534 1919 -1500 3 727 300 245 137 28 chr13 18718187 18718435 -101565877 + L1M4 LINE L1 4543 4817 -1329 3 727 385 256 31 20 chr13 18718604 18718805 -101565507 + L1MD LINE L1 5188 5394 -752 3 727 515 287 40 46 chr13 18718862 18719037 -101565275 + Tigger5 DNA MER2_type 26 199 -2207 3 727 339 321 27 0 chr13 18719048 18719160 -101565152 + Tigger5 DNA MER2_type 2291 2405 -1 3 727 532 305 43 17 chr13 18719175 18719475 -101564837 + L1M4 LINE L1 5464 5771 -393 3 727 447 236 36 0 chr13 18719961 18720071 -101564241 + Lx8 LINE L1 7008 7121 -352 3 727 198 0 0 0 chr13 18720087 18720109 -101564203 + (GGA)n Simple_repeat Simple_repeat 3 24 0 3 727 25 65 0 0 chr13 18720209 18720255 -101564057 + AT_rich Low_complexity Low_complexity 1 46 0 3 727 365 338 83 43 chr13 18720548 18720897 -101563415 - HAL1b LINE L1 -576 1433 1071 3 727 924 239 124 15 chr13 18721070 18721401 -101562911 + ORR1D2 LTR MaLR 3 369 -1 3 727 3022 222 135 33 chr13 18721418 18722437 -101561875 + Lx9 LINE L1 6168 7290 -354 3 727 429 324 78 76 chr13 18722698 18723212 -101561100 - L1MC5 LINE L1 -746 7215 6701 3 727 29 28 0 0 chr13 18723363 18723399 -101560913 + AT_rich Low_complexity Low_complexity 1 36 0 3 727 637 273 0 7 chr13 18724568 18724708 -101559604 + B1_Mur1 SINE Alu 1 139 -10 3 727 21 0 0 0 chr13 18725151 18725172 -101559140 + AT_rich Low_complexity Low_complexity 1 21 0 3 727 21 36 0 0 chr13 18725459 18725487 -101558825 + AT_rich Low_complexity Low_complexity 1 28 0 3 727 623 361 82 58 chr13 18725602 18726087 -101558225 + MLT1F2 LTR MaLR 28 524 -36 3 727 22 0 0 0 chr13 18726105 18726127 -101558185 + AT_rich Low_complexity Low_complexity 1 22 0 3 727 2801 247 50 88 chr13 18726253 18726599 -101557713 + Lx9 LINE L1 3273 3585 -2262 3 727 5295 56 5 1 chr13 18726599 18727263 -101557049 - L1Md_F2 LINE L1 -16 6566 5901 3 727 2801 266 48 96 chr13 18727263 18729116 -101555196 + Lx9 LINE L1 3571 5315 -565 3 727 834 250 11 49 chr13 18729108 18729373 -101554939 + Lx9 LINE L1 5460 5714 -133 3 727 1684 320 62 14 chr13 18729374 18730151 -101554161 + Lx9 LINE L1 6203 7158 -486 3 727 427 234 21 0 chr13 18730158 18730252 -101554060 - Lx9 LINE L1 -1016 6628 6533 3 727 289 354 34 14 chr13 18730309 18730455 -101553857 + Lx8 LINE L1 7088 7236 -237 3 727 4544 108 5 6 chr13 18730458 18731108 -101553204 - L1_Mus4 LINE L1 -4 6632 5984 3 727 4329 12 2 24 chr13 18731108 18731612 -101552700 - MT2_Mm LTR ERVL 0 493 1 3 727 4544 108 5 6 chr13 18731612 18731624 -101552688 - L1_Mus4 LINE L1 -653 5983 5972 3 727 399 123 13 40 chr13 18731650 18731726 -101552586 - ORR1A3-int LTR MaLR -1323 640 567 3 727 38764 17 14 0 chr13 18731726 18737024 -101547288 - MERVL-int LTR ERVL -114 5371 1 3 727 4329 12 2 24 chr13 18737024 18737528 -101546784 - MT2_Mm LTR ERVL 0 493 1 3 727 2911 67 15 5 chr13 18737528 18738024 -101546288 - L1_Mus4 LINE L1 -650 5988 5484 3 727 723 180 10 9 chr13 18738024 18738166 -101546146 + RLTR13D5 LTR ERVK 1 147 -755 3 727 481 139 0 14 chr13 18738145 18738218 -101546094 + RLTR13D5 LTR ERVK 831 902 0 3 727 298 111 0 0 chr13 18738218 18738263 -101546049 - L1_Mm LINE L1 -394 5489 5445 3 727 288 0 0 0 chr13 18738264 18738296 -101546016 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 727 5506 62 36 1 chr13 18738299 18739028 -101545284 + RLTR13D5 LTR ERVK 104 857 -166 3 727 8999 55 2 1 chr13 18739029 18740921 -101543391 - L1Md_F2 LINE L1 -12 6570 4677 3 727 1034 155 6 12 chr13 18740922 18741092 -101543220 + RLTR13D6 LTR ERVK 734 902 0 3 727 238 108 0 0 chr13 18741092 18741129 -101543183 - L1_Mm LINE L1 -394 5489 5453 3 727 470 31 16 0 chr13 18741131 18741195 -101543117 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 3 727 479 36 49 6 chr13 18741195 18741263 -101543049 - B1_Mm SINE Alu -13 134 41 3 727 1947 161 13 28 chr13 18741266 18741662 -101542650 - L1_Mm LINE L1 -458 5425 5036 3 727 5827 136 11 1 chr13 18741652 18742658 -101541654 - L1VL4 LINE L1 -2530 1029 15 3 727 371 194 11 0 chr13 18742772 18742865 -101541447 + (TA)n Simple_repeat Simple_repeat 2 95 0 3 727 1067 98 0 7 chr13 18743011 18743155 -101541157 + B1_Mus2 SINE Alu 2 144 -3 3 727 378 0 0 0 chr13 18743155 18743197 -101541115 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 3 727 21 57 0 0 chr13 18743218 18743253 -101541059 + AT_rich Low_complexity Low_complexity 1 35 0 3 728 1544 145 47 3 chr13 18744308 18744606 -101539706 - L1_Mur3 LINE L1 -1128 4752 4442 3 728 2042 171 3 3 chr13 18744585 18744972 -101539340 - L1_Mur3 LINE L1 -1740 4140 3754 3 728 1569 170 10 43 chr13 18744972 18745273 -101539039 + RMER6C LTR ERVK 1 291 -399 3 728 12461 121 91 47 chr13 18745273 18747524 -101536788 - L1Md_T LINE L1 -1 6581 4025 3 728 1278 169 77 3 chr13 18747524 18747802 -101536510 + RMER6C LTR ERVK 393 690 0 3 728 12461 121 91 47 chr13 18747802 18750040 -101534272 - L1Md_T LINE L1 -1 4024 1480 3 728 230 256 11 11 chr13 18750037 18750128 -101534184 + L1M3 LINE L1 3615 3705 -2435 3 728 568 250 0 8 chr13 18750126 18750255 -101534057 - Lx7 LINE L1 -686 7010 6883 3 728 701 277 60 36 chr13 18750368 18750426 -101533886 - Lx7 LINE L1 -598 6875 6798 3 728 3383 30 2 5 chr13 18750426 18750823 -101533489 + MTA_Mm LTR MaLR 1 396 0 3 728 701 276 59 36 chr13 18750823 18751055 -101533257 - Lx7 LINE L1 -668 6805 6578 3 728 1862 283 87 46 chr13 18751455 18752060 -101532252 - Lx7 LINE L1 -1097 6599 5970 3 728 2671 37 30 120 chr13 18752060 18752461 -101531851 + RLTR10B2 LTR ERVK 1 365 0 3 728 1862 254 70 11 chr13 18752461 18753120 -101531192 - Lx7 LINE L1 -1727 5969 5278 3 728 4608 240 102 41 chr13 18753117 18754979 -101529333 - Lx7 LINE L1 -1859 4021 2048 3 728 2932 56 15 100 chr13 18755020 18755325 -101528987 - BGLII LTR ERVK 0 421 127 3 728 1159 57 0 0 chr13 18755325 18755466 -101528846 + B1_Mus1 SINE Alu 1 141 -7 3 728 2932 56 15 100 chr13 18755466 18755620 -101528692 - BGLII LTR ERVK -295 126 1 3 728 190 358 139 10 chr13 18755918 18756127 -101528185 + L2b LINE L2 2954 3190 -197 3 728 339 311 86 14 chr13 18756601 18756810 -101527502 - L1MC LINE L1 -2984 3162 2939 3 728 249 267 139 33 chr13 18756953 18757104 -101527208 - L1M5 LINE L1 -3507 2639 2473 3 728 2200 303 56 19 chr13 18757570 18758026 -101526286 - Lx8 LINE L1 -151 7322 6857 3 728 407 19 0 19 chr13 18758026 18758079 -101526233 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 3 728 2200 303 56 19 chr13 18758079 18758477 -101525835 - Lx8 LINE L1 -617 6856 6438 3 728 723 261 45 29 chr13 18758486 18758731 -101525581 - Lx8 LINE L1 -963 6510 6262 3 728 2105 227 64 3 chr13 18758733 18758790 -101525522 + L1_Mur3 LINE L1 3750 3806 -2074 3 728 279 0 0 0 chr13 18758790 18758821 -101525491 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 728 2105 227 64 3 chr13 18758821 18759400 -101524912 + L1_Mur3 LINE L1 3807 4424 -1456 3 728 450 0 0 0 chr13 18759550 18759600 -101524712 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 728 346 205 24 24 chr13 18760351 18760436 -101523876 + MER104 DNA Tc2 38 122 -59 3 728 200 94 31 0 chr13 18760970 18761002 -101523310 + (CAAAT)n Simple_repeat Simple_repeat 5 37 0 3 728 377 297 0 17 chr13 18761347 18761467 -101522845 + A-rich Low_complexity Low_complexity 1 118 0 3 728 6503 116 3 9 chr13 18761517 18762511 -101521801 - Lx LINE L1 -6 6648 5661 3 728 2504 106 0 0 chr13 18762525 18762892 -101521420 + Lx LINE L1 5308 5674 -209 3 728 231 271 136 27 chr13 18763028 18763138 -101521174 + LTR82B Low_complexity ERVL 15 136 -694 3 728 516 32 0 0 chr13 18763575 18763637 -101520675 + (TTCC)n Simple_repeat Simple_repeat 4 65 0 3 728 3225 216 13 18 chr13 18763649 18764482 -101519830 - Lx5 LINE L1 -35 7015 6166 3 728 4175 149 12 16 chr13 18764483 18765245 -101519067 + L1_Mur2 LINE L1 4986 5744 -133 3 728 295 309 156 35 chr13 18765245 18765378 -101518934 + LTR82B Low_complexity ERVL 548 706 -124 3 728 1225 75 6 34 chr13 18765378 18765537 -101518775 + B2_Mm1a SINE B2 1 160 -33 3 728 1130 65 13 0 chr13 18765537 18765692 -101518620 + (GAAA)n Simple_repeat Simple_repeat 3 159 0 3 728 1225 75 6 34 chr13 18765692 18765711 -101518601 + B2_Mm1a SINE B2 161 174 -19 3 728 295 309 156 35 chr13 18765711 18765808 -101518504 + LTR82B Low_complexity ERVL 707 806 -24 3 728 1007 246 5 0 chr13 18766431 18766634 -101517678 + B3 SINE B2 1 204 -12 3 728 616 288 0 0 chr13 18766660 18766792 -101517520 + ID_B1 SINE B4 84 215 -9 3 728 236 345 99 95 chr13 18766961 18767224 -101517088 + ORR1E LTR MaLR 96 359 0 3 728 33 43 0 0 chr13 18767719 18767766 -101516546 + AT_rich Low_complexity Low_complexity 1 47 0 3 728 678 301 80 40 chr13 18768036 18768237 -101516075 - B4 SINE B4 -2 290 82 3 728 463 169 30 6 chr13 18768523 18768690 -101515622 + (TATATG)n Simple_repeat Simple_repeat 5 175 0 3 728 763 282 15 0 chr13 18768935 18769137 -101515175 + B3 SINE B2 2 206 -10 3 728 411 396 46 28 chr13 18769160 18769443 -101514869 + B4A SINE B4 3 290 -2 3 728 6042 28 64 1 chr13 18769508 18770626 -101513686 - L1Md_T LINE L1 -22 6560 5336 3 728 1635 58 0 0 chr13 18770626 18770833 -101513479 + L1Md_T LINE L1 6376 6582 0 3 728 4647 172 46 17 chr13 18770842 18771727 -101512585 - RMER21A LTR ERV1 -36 911 1 3 728 251 157 0 19 chr13 18771778 18771830 -101512482 + GA-rich Low_complexity Low_complexity 2 52 0 3 728 719 197 15 0 chr13 18771863 18772000 -101512312 + B1_Mur2 SINE Alu 6 144 -5 3 728 550 168 0 47 chr13 18773026 18773132 -101511180 + B1_Mur3 SINE Alu 40 140 -9 3 728 2683 52 2 79 chr13 18773617 18773769 -101510543 - L1Md_F2 LINE L1 -2 6580 6431 3 728 1253 27 0 0 chr13 18773769 18773916 -101510396 + B1_Mus2 SINE Alu 1 147 0 3 728 2683 52 2 79 chr13 18773916 18774156 -101510156 - L1Md_F2 LINE L1 -152 6430 6218 3 728 21 82 0 0 chr13 18774534 18774583 -101509729 + AT_rich Low_complexity Low_complexity 1 49 0 3 728 1555 274 68 19 chr13 18774954 18775657 -101508655 - L1_Mur3 LINE L1 -1696 4184 3446 3 728 520 301 39 0 chr13 18775689 18775842 -101508470 + B3A SINE B2 40 198 0 3 728 996 44 15 7 chr13 18775848 18775984 -101508328 + B1_Mus1 SINE Alu 12 148 0 3 728 212 171 0 0 chr13 18775988 18776029 -101508283 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 3 728 1264 273 122 35 chr13 18776043 18776893 -101507419 - L1_Mur3 LINE L1 -2477 3403 2480 3 728 2262 205 12 35 chr13 18776957 18777148 -101507164 + MTC LTR MaLR 1 196 -225 3 728 674 78 10 0 chr13 18777148 18777250 -101507062 + L1_Mus2 LINE L1 6464 6566 0 3 728 2262 205 12 35 chr13 18777250 18777488 -101506824 + MTC LTR MaLR 197 420 -1 3 728 8677 114 7 9 chr13 18777554 18779030 -101505282 - Lx3C LINE L1 -8 6968 5501 3 728 1372 96 15 0 chr13 18779030 18779228 -101505084 + BGLII_Mus LTR ERVK 1 201 -221 3 728 989 242 73 35 chr13 18779236 18779523 -101504789 + RLTR20D LTR ERVK 271 568 0 3 728 34538 46 14 4 chr13 18779525 18784817 -101499495 + L1Md_T LINE L1 281 5586 -297 3 728 8544 29 0 0 chr13 18784817 18785813 -101498499 + L1Md_T LINE L1 5587 6582 0 3 728 180 273 35 35 chr13 18786102 18786159 -101498153 - MIRb SINE MIR -8 260 204 4 728 214 291 13 0 chr13 18786175 18786254 -101498058 + PB1D10 SINE Alu 33 112 -5 4 728 504 48 0 0 chr13 18786256 18786319 -101497993 + (CATA)n Simple_repeat Simple_repeat 2 64 0 4 728 776 374 102 28 chr13 18786587 18787096 -101497216 + MLT1F2 LTR MaLR 8 554 -6 4 728 332 248 28 9 chr13 18787311 18787417 -101496895 + L1M4 LINE L1 4904 5011 -1135 4 728 760 254 59 70 chr13 18787723 18788040 -101496272 - RLTR19-int LTR ERVK -2170 3967 3861 4 728 663 133 169 15 chr13 18788040 18788170 -101496142 + B1_Mur4 SINE Alu 1 150 0 4 728 760 206 84 155 chr13 18788170 18788181 -101496131 - RLTR19-int LTR ERVK -2277 3860 3859 4 728 186 0 0 81 chr13 18788181 18788218 -101496094 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 4 728 760 206 84 155 chr13 18788218 18788606 -101495706 - RLTR19-int LTR ERVK -2279 3858 3493 4 728 757 211 113 46 chr13 18788618 18788736 -101495576 + RMER17C LTR ERVK 157 276 -134 4 728 191 32 0 61 chr13 18788736 18788769 -101495543 + (CTATA)n Simple_repeat Simple_repeat 1 31 0 4 728 757 211 113 46 chr13 18788769 18788888 -101495424 + RMER17C LTR ERVK 277 409 -1 4 728 359 233 0 62 chr13 18788920 18789016 -101495296 - LTR53 LTR ERVL -429 90 1 4 728 366 308 19 0 chr13 18789146 18789253 -101495059 + MER5C DNA MER1_type 6 114 -199 4 728 255 41 40 20 chr13 18790268 18790318 -101493994 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 728 297 260 62 10 chr13 18791513 18791610 -101492702 + MIRm SINE MIR 46 147 -129 4 728 463 147 61 4 chr13 18791647 18791744 -101492568 + B1_Mus1 SINE Alu 1 100 -47 4 728 435 286 63 31 chr13 18792125 18792316 -101491996 - RMER15 LTR ERVL -43 532 336 4 728 2333 210 69 36 chr13 18792646 18793282 -101491030 - RLTR17 LTR ERVK -73 619 1 4 728 494 269 82 49 chr13 18793282 18793441 -101490871 + B3 SINE B2 52 216 0 4 728 692 235 15 101 chr13 18794233 18794432 -101489880 + B3A SINE B2 1 182 -16 4 728 303 212 0 0 chr13 18794432 18794512 -101489800 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 728 462 305 84 33 chr13 18797598 18797871 -101486441 - MER2 DNA MER2_type -15 330 23 4 728 755 146 0 53 chr13 18798228 18798380 -101485932 + L1Md_F2 LINE L1 572 715 -5901 4 728 24069 74 0 7 chr13 18798381 18801982 -101482330 + L1Md_F2 LINE L1 1052 4610 -1273 4 728 784 42 0 0 chr13 18801989 18802085 -101482227 + L1Md_F2 LINE L1 5490 5585 -298 4 728 8053 48 3 2 chr13 18802086 18803079 -101481233 + L1Md_F2 LINE L1 5587 6580 -2 4 728 42 57 0 0 chr13 18803232 18803302 -101481010 + AT_rich Low_complexity Low_complexity 1 70 0 4 728 274 360 114 13 chr13 18805687 18805836 -101478476 - MER5A1 DNA MER1_type -1 165 2 4 728 252 0 0 0 chr13 18806390 18806418 -101477894 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 4 728 489 76 0 0 chr13 18806503 18806569 -101477743 + (TTTA)n Simple_repeat Simple_repeat 2 67 0 4 728 554 246 75 0 chr13 18806772 18806906 -101477406 + B1_Mur2 SINE Alu 2 145 -4 4 728 386 271 70 0 chr13 18807567 18807696 -101476616 + RMER15 LTR ERVL 380 517 -58 4 728 688 270 11 33 chr13 18808403 18808583 -101475729 + B3 SINE B2 41 216 0 4 728 21 0 0 0 chr13 18808658 18808679 -101475633 + AT_rich Low_complexity Low_complexity 1 21 0 4 728 261 265 0 0 chr13 18809645 18809728 -101474584 + (TA)n Simple_repeat Simple_repeat 2 84 0 4 728 221 300 64 43 chr13 18810235 18810329 -101473983 - MIRc SINE MIR -7 261 166 4 728 200 348 64 14 chr13 18810470 18810655 -101473657 + L2b LINE L2 2968 3167 -259 4 728 308 181 28 0 chr13 18810952 18811024 -101473288 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 4 728 21 0 0 0 chr13 18811242 18811263 -101473049 + AT_rich Low_complexity Low_complexity 1 21 0 4 728 183 80 0 0 chr13 18811290 18811315 -101472997 + (T)n Simple_repeat Simple_repeat 1 25 0 4 728 185 277 76 15 chr13 18811929 18811995 -101472317 + L2b LINE L2 3266 3335 -52 4 728 207 0 0 0 chr13 18812392 18812415 -101471897 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 4 728 600 232 164 39 chr13 18812840 18813450 -101470862 - L1M3 LINE L1 -820 5492 4804 4 728 720 270 47 0 chr13 18814434 18814645 -101469667 + ID_B1 SINE B4 2 222 -2 4 728 190 319 0 89 chr13 18816994 18817073 -101467239 - L3 LINE CR1 -24 4465 4394 4 728 1332 71 16 26 chr13 18817121 18817310 -101467002 - B2_Mm2 SINE B2 -7 188 2 4 728 401 245 144 25 chr13 18817591 18817792 -101466520 - Lx9 LINE L1 -28 7616 7392 4 728 2268 107 3 52 chr13 18817873 18818217 -101466095 - ORR1A2 LTR MaLR 0 327 1 4 728 10931 112 75 24 chr13 18818217 18820084 -101464228 - ORR1A2-int LTR MaLR 0 1963 1 4 728 1947 92 64 118 chr13 18820084 18820430 -101463882 - ORR1A2 LTR MaLR 0 327 1 4 728 411 253 28 80 chr13 18820441 18820617 -101463695 + Lx9 LINE L1 6821 6987 -657 4 728 31 26 0 0 chr13 18821143 18821181 -101463131 + AT_rich Low_complexity Low_complexity 1 38 0 4 728 232 167 45 56 chr13 18821988 18822077 -101462235 + Lx6 LINE L1 7366 7453 -7 4 728 289 297 95 78 chr13 18822423 18822602 -101461710 + MLT1D LTR MaLR 21 202 -303 4 728 444 109 16 94 chr13 18822607 18822799 -101461513 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 4 728 427 270 173 11 chr13 18822893 18823084 -101461228 + MLT1D LTR MaLR 284 505 0 4 728 22 80 0 0 chr13 18825637 18825687 -101458625 + AT_rich Low_complexity Low_complexity 1 50 0 4 728 257 309 85 23 chr13 18826003 18826132 -101458180 - MER20 DNA MER1_type -3 216 80 4 728 419 219 14 115 chr13 18827924 18828063 -101456249 - PB1 SINE Alu -2 125 1 4 728 488 318 147 26 chr13 18829746 18830011 -101454301 + MLT1F LTR MaLR 25 321 -227 4 728 1568 291 117 24 chr13 18830084 18830136 -101454176 - Lx8 LINE L1 -86 7387 7332 4 728 570 67 0 0 chr13 18830136 18830211 -101454101 + (TATG)n Simple_repeat Simple_repeat 2 76 0 4 728 1568 291 117 24 chr13 18830211 18830951 -101453361 - Lx8 LINE L1 -142 7331 6521 4 728 1848 160 62 38 chr13 18831903 18832274 -101452038 - ORR1C2 LTR MaLR 0 384 5 4 728 2959 67 54 0 chr13 18832506 18832896 -101451416 - RLTR10A LTR ERVK 0 411 1 4 728 610 344 107 12 chr13 18834110 18834539 -101449773 - Lx8 LINE L1 -44 7429 6960 4 728 219 36 0 0 chr13 18834613 18834641 -101449671 + (ATTG)n Simple_repeat Simple_repeat 1 28 0 4 728 318 271 0 0 chr13 18834695 18834791 -101449521 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 728 560 317 34 14 chr13 18834860 18835007 -101449305 - RSINE1 SINE B4 0 165 16 4 728 24 0 0 0 chr13 18836222 18836246 -101448066 + AT_rich Low_complexity Low_complexity 1 24 0 4 728 22 56 0 0 chr13 18837488 18837524 -101446788 + AT_rich Low_complexity Low_complexity 1 36 0 4 728 918 179 0 0 chr13 18837546 18837714 -101446598 - URR1A DNA MER1_type 0 226 59 4 728 589 310 17 0 chr13 18838145 18838319 -101445993 - B3 SINE B2 0 216 40 4 728 3147 65 0 0 chr13 18838608 18839005 -101445307 - L1_Mus4 LINE L1 -653 5983 5587 4 728 297 316 72 31 chr13 18839977 18840170 -101444142 + L1M5 LINE L1 5580 5780 -393 4 728 21 0 0 0 chr13 18840341 18840362 -101443950 + AT_rich Low_complexity Low_complexity 1 21 0 4 728 180 0 0 0 chr13 18840486 18840506 -101443806 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 4 728 546 28 0 40 chr13 18840902 18840977 -101443335 - B1_Mm SINE Alu 0 147 76 4 728 266 237 97 0 chr13 18840981 18841074 -101443238 + L1MA4 LINE L1 5825 5926 -374 4 728 1218 181 101 148 chr13 18841285 18841732 -101442580 - Lx9 LINE L1 -16 7628 7203 4 728 3943 219 26 6 chr13 18841731 18842531 -101441781 + Lx9 LINE L1 6380 7195 -449 4 728 216 91 22 43 chr13 18842717 18842763 -101441549 + A-rich Low_complexity Low_complexity 2 46 0 4 728 338 341 0 28 chr13 18842778 18842920 -101441392 - Lx9 LINE L1 -275 7369 7232 4 728 1130 229 134 66 chr13 18842956 18843532 -101440780 + L1_Rod LINE L1 4958 5572 -275 4 728 1619 209 29 100 chr13 18843544 18843954 -101440358 - MTD LTR MaLR -14 405 25 4 728 359 267 94 55 chr13 18844527 18844654 -101439658 + MLT1A LTR MaLR 1 132 -242 4 728 1249 235 110 43 chr13 18844805 18845179 -101439133 + MTD LTR MaLR 20 418 -1 4 728 232 229 197 8 chr13 18845215 18845347 -101438965 - Lx9 LINE L1 -14 7630 7474 4 728 322 224 8 17 chr13 18845459 18845577 -101438735 - RMER10B LTR ERVL -87 311 195 4 728 300 27 0 0 chr13 18845577 18845614 -101438698 + (GA)n Simple_repeat Simple_repeat 1 37 0 4 728 366 61 0 0 chr13 18847411 18847460 -101436852 + (CAGAGA)n Simple_repeat Simple_repeat 3 51 0 4 728 246 62 0 0 chr13 18847829 18847861 -101436451 + (TTAGGG)n Simple_repeat Simple_repeat 5 36 0 4 728 219 274 40 27 chr13 18848519 18848594 -101435718 - ID2 SINE ID -3 80 5 4 728 238 326 79 11 chr13 18848699 18848876 -101435436 + L1M5 LINE L1 5656 5844 -335 4 728 397 241 61 42 chr13 18848885 18849050 -101435262 + L1MB5 LINE L1 5807 5974 -200 4 728 880 265 11 0 chr13 18849903 18850088 -101434224 + B3A SINE B2 3 189 -9 4 728 204 211 0 0 chr13 18850219 18850257 -101434055 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 728 1087 313 60 69 chr13 18850464 18851016 -101433296 - MER44B DNA MER2_type -1 549 3 4 728 326 291 0 44 chr13 18852318 18852408 -101431904 - ID_B1 SINE B4 -12 212 127 4 728 1083 15 0 22 chr13 18852805 18852939 -101431373 + B1_Mus1 SINE Alu 18 148 0 4 728 357 333 62 8 chr13 18853368 18853498 -101430814 + L2 LINE L2 2673 2809 -610 4 728 2174 103 59 40 chr13 18854033 18854356 -101429956 + ORR1A4 LTR MaLR 1 329 0 4 728 5524 100 17 14 chr13 18854559 18855331 -101428981 - Lx LINE L1 0 6654 5881 4 728 802 92 77 12 chr13 18855331 18855472 -101428840 + Lx LINE L1 5771 5912 -670 4 728 462 295 181 44 chr13 18856809 18857057 -101427255 + B4 SINE B4 11 292 0 4 728 446 317 112 69 chr13 18858217 18858664 -101425648 + Lx7 LINE L1 5589 6054 -1642 4 728 384 22 0 0 chr13 18858706 18858751 -101425561 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 728 257 0 30 0 chr13 18862164 18862197 -101422115 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 728 1259 41 7 0 chr13 18862205 18862350 -101421962 - B1_Mus2 SINE Alu 0 147 2 4 728 583 297 92 57 chr13 18862497 18862779 -101421533 - B4A SINE B4 0 292 1 4 728 817 302 148 3 chr13 18863031 18863356 -101420956 + MTEa LTR MaLR 6 377 -2 4 728 21 36 0 0 chr13 18863728 18863756 -101420556 + AT_rich Low_complexity Low_complexity 1 28 0 5 728 354 286 22 11 chr13 18864598 18864690 -101419622 + PB1D10 SINE Alu 23 115 -2 5 728 278 275 8 0 chr13 18864690 18864756 -101419556 + ID4_ SINE ID 2 70 -13 5 728 22 35 0 0 chr13 18864983 18865012 -101419300 + AT_rich Low_complexity Low_complexity 1 29 0 5 728 539 287 74 18 chr13 18865167 18865476 -101418836 - ORR1E LTR MaLR -6 373 4 5 728 518 312 136 49 chr13 18865902 18865968 -101418344 + Tigger7 DNA MER2_type 5 70 -2421 5 728 1187 186 88 0 chr13 18865968 18866172 -101418140 - URR1B DNA MER1_type -3 222 1 5 728 518 312 136 49 chr13 18866172 18866348 -101417964 + Tigger7 DNA MER2_type 71 268 -2223 5 728 302 293 13 0 chr13 18866368 18866443 -101417869 + Tigger7 DNA MER2_type 2407 2482 -9 5 728 23 33 0 0 chr13 18866494 18866524 -101417788 + AT_rich Low_complexity Low_complexity 1 30 0 5 728 5125 92 18 1 chr13 18869312 18870044 -101414268 - Lx3C LINE L1 -2558 5437 4664 5 728 3671 103 10 7 chr13 18870042 18870670 -101413642 + Lx3C LINE L1 5372 5998 -983 5 728 5765 115 9 11 chr13 18870670 18871486 -101412826 + Lx3C LINE L1 6161 6974 -2 5 728 1431 201 0 0 chr13 18871548 18871802 -101412510 - MTC LTR MaLR -1 420 167 5 728 3198 107 2 12 chr13 18871803 18872287 -101412025 - L1_Mur2 LINE L1 -2751 3126 2648 5 728 310 257 124 35 chr13 18872779 18872924 -101411388 + MER3 DNA MER1_type 4 161 -48 5 728 21 89 0 0 chr13 18873978 18874034 -101410278 + AT_rich Low_complexity Low_complexity 1 56 0 5 729 23 0 0 0 chr13 18874742 18874765 -101409547 + AT_rich Low_complexity Low_complexity 1 23 0 5 729 291 175 0 0 chr13 18875682 18875739 -101408573 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 729 412 279 4 7 chr13 18876824 18876978 -101407334 - L1M6 LINE L1 -4830 1571 1372 5 729 241 269 89 36 chr13 18877570 18877682 -101406630 + MIRb SINE MIR 115 232 -36 5 729 292 0 45 23 chr13 18877849 18877893 -101406419 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 729 1443 225 83 17 chr13 18878062 18878435 -101405877 - MTD LTR MaLR -14 405 19 5 729 264 158 0 0 chr13 18878975 18879032 -101405280 + CT-rich Low_complexity Low_complexity 1 57 0 5 729 278 259 239 9 chr13 18879485 18879598 -101404714 - B4 SINE B4 -56 236 98 5 729 543 200 11 10 chr13 18879500 18879608 -101404704 - PB1D10 SINE Alu -7 110 4 5 729 252 236 10 119 chr13 18879519 18879620 -101404692 - MT2B2 LTR ERVL -338 246 157 5 729 382 263 16 58 chr13 18880823 18880944 -101403368 - PB1D10 SINE Alu -1 116 1 5 729 464 279 124 124 chr13 18881128 18881484 -101402828 - MLT1A0 LTR MaLR -4 361 6 5 729 666 203 117 63 chr13 18881685 18881890 -101402422 + B3 SINE B2 1 216 0 5 729 218 298 11 35 chr13 18882356 18882408 -101401904 + polypyrimidine Low_complexity Low_complexity 38 88 0 5 729 216 0 0 0 chr13 18882408 18882432 -101401880 + (CAGT)n Simple_repeat Simple_repeat 1 24 0 5 729 393 22 0 0 chr13 18882432 18882477 -101401835 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 729 218 298 11 35 chr13 18882477 18882510 -101401802 + polypyrimidine Low_complexity Low_complexity 5 37 0 5 729 266 240 0 20 chr13 18882887 18882985 -101401327 + (TATG)n Simple_repeat Simple_repeat 3 98 0 5 729 28 29 0 0 chr13 18883159 18883194 -101401118 + AT_rich Low_complexity Low_complexity 1 35 0 5 729 446 254 174 25 chr13 18887757 18887878 -101396434 - B1_Mur2 SINE Alu -8 141 3 5 729 994 271 5 5 chr13 18887997 18888205 -101396107 - B3 SINE B2 -8 208 1 5 729 3127 199 68 30 chr13 18888264 18888394 -101395918 - RMER1B Other Other -4 1062 924 5 729 198 0 0 0 chr13 18888394 18888416 -101395896 + (CAA)n Simple_repeat Simple_repeat 2 23 0 5 729 3127 199 68 30 chr13 18888416 18888963 -101395349 - RMER1B Other Other -143 923 359 5 729 547 296 56 51 chr13 18888999 18889195 -101395117 - B3A SINE B2 -1 197 1 5 729 2287 213 35 28 chr13 18889493 18890020 -101394292 - RMER1B Other Other -558 508 2 5 729 869 160 52 84 chr13 18890658 18890849 -101393463 - B2_Mm2 SINE B2 -10 185 1 5 729 1150 169 182 7 chr13 18890861 18891136 -101393176 - ORR1B2 LTR MaLR -21 346 24 5 729 387 119 0 0 chr13 18891663 18891730 -101392582 + (ATTTG)n Simple_repeat Simple_repeat 3 69 0 5 729 38 22 0 0 chr13 18892844 18892889 -101391423 + AT_rich Low_complexity Low_complexity 1 45 0 5 729 1212 81 0 0 chr13 18892896 18893044 -101391268 + B1_Mus1 SINE Alu 1 148 0 5 729 409 251 6 93 chr13 18893103 18893193 -101391119 - B4 SINE B4 -18 274 225 5 729 929 121 23 0 chr13 18893193 18893367 -101390945 + (TC)n Simple_repeat Simple_repeat 2 179 0 5 729 409 198 0 122 chr13 18893367 18893412 -101390900 - B4 SINE B4 -68 224 189 5 729 557 292 48 7 chr13 18893464 18893609 -101390703 - B4 SINE B4 -113 179 29 5 729 922 268 109 27 chr13 18894379 18894755 -101389557 - MER90 LTR ERV1 -168 407 1 5 729 399 234 77 0 chr13 18895220 18895357 -101388955 - L1MA6 LINE L1 -383 5914 5767 5 729 1824 201 17 22 chr13 18895366 18895727 -101388585 - ORR1B2 LTR MaLR -8 359 1 5 729 625 275 52 32 chr13 18895730 18895946 -101388366 - L1MA6 LINE L1 -534 5763 5490 5 729 182 37 0 36 chr13 18895946 18895974 -101388338 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 5 729 625 279 134 8 chr13 18895974 18896251 -101388061 - L1MA6 LINE L1 -811 5489 5162 5 729 225 364 8 0 chr13 18896259 18896380 -101387932 - L1M5 LINE L1 -425 5699 5578 5 729 285 29 0 0 chr13 18897839 18897873 -101386439 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 729 416 245 34 13 chr13 18897884 18897983 -101386329 - B3A SINE B2 -92 101 2 5 729 258 105 0 0 chr13 18898184 18898222 -101386090 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 729 244 301 58 0 chr13 18900512 18900615 -101383697 + Lx9 LINE L1 7358 7466 -178 5 729 297 0 0 0 chr13 18900624 18900657 -101383655 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 729 255 140 0 0 chr13 18903733 18903783 -101380529 + (T)n Simple_repeat Simple_repeat 1 50 0 5 729 1293 48 0 0 chr13 18903790 18903936 -101380376 - B1_Mus2 SINE Alu -1 146 1 5 729 207 0 0 0 chr13 18905133 18905156 -101379156 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 729 926 192 72 104 chr13 18905723 18905944 -101378368 - B3 SINE B2 0 216 3 5 729 235 310 94 94 chr13 18906374 18906566 -101377746 + MIR SINE MIR 31 222 -40 5 729 243 359 62 27 chr13 18906574 18906720 -101377592 + L2b LINE L2 2650 2800 -619 5 729 186 391 98 57 chr13 18906720 18906819 -101377493 + L2b LINE L2 2922 3028 -347 5 729 1804 186 166 17 chr13 18906819 18907223 -101377089 - RMER4A LTR ERVK -2 464 1 5 729 186 391 98 57 chr13 18907223 18907511 -101376801 + L2b LINE L2 3029 3325 -50 5 729 1193 88 0 0 chr13 18907832 18907980 -101376332 - B1_Mus1 SINE Alu 0 148 1 5 729 300 27 0 0 chr13 18909620 18909657 -101374655 + (GGTTG)n Simple_repeat Simple_repeat 2 38 0 5 729 789 204 42 0 chr13 18909657 18909799 -101374513 - B1_Mur4 SINE Alu 0 150 3 5 729 323 341 143 53 chr13 18909841 18910107 -101374205 + B4A SINE B4 1 290 -2 5 729 327 343 78 6 chr13 18910113 18910292 -101374020 - MIRb SINE MIR -40 228 37 5 729 518 278 15 0 chr13 18910310 18910443 -101373869 + B1F SINE Alu 12 146 -3 5 729 342 0 0 0 chr13 18912583 18912621 -101371691 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 729 553 227 27 0 chr13 18913890 18914000 -101370312 + ID_B1 SINE B4 84 196 -28 5 729 241 299 29 29 chr13 18914469 18914538 -101369774 - ID4_ SINE ID -14 69 1 5 729 306 303 30 76 chr13 18914545 18914677 -101369635 - PB1 SINE Alu 0 127 2 5 729 717 293 52 45 chr13 18914741 18915009 -101369303 - B4A SINE B4 -18 274 5 5 729 28 0 0 0 chr13 18915215 18915243 -101369069 + AT_rich Low_complexity Low_complexity 1 28 0 5 729 300 239 79 11 chr13 18915461 18915550 -101368762 - L1MA5 LINE L1 -31 6269 6175 5 729 572 101 0 11 chr13 18916582 18916672 -101367640 + (TCC)n Simple_repeat Simple_repeat 3 91 0 5 729 25 0 0 0 chr13 18916910 18916935 -101367377 + AT_rich Low_complexity Low_complexity 1 25 0 5 729 183 184 0 0 chr13 18917516 18917554 -101366758 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 729 336 280 0 13 chr13 18917850 18917926 -101366386 - ID2 SINE ID -8 75 1 5 729 188 281 76 33 chr13 18918449 18918541 -101365771 + MIRc SINE MIR 107 202 -66 5 729 359 355 64 0 chr13 18918624 18918796 -101365516 - MER3 DNA MER1_type -15 194 12 5 729 338 281 183 123 chr13 18918971 18919239 -101365073 - MTEb LTR MaLR -21 358 75 5 729 267 257 54 0 chr13 18919891 18919965 -101364347 - ID4 SINE ID -4 79 2 5 729 230 140 39 39 chr13 18921875 18921927 -101362385 + (TATG)n Simple_repeat Simple_repeat 1 52 0 5 729 565 306 46 36 chr13 18921935 18922216 -101362096 - B4A SINE B4 -8 284 1 5 729 1785 54 9 0 chr13 18923568 18923790 -101360522 + L1_Mus1 LINE L1 6153 6376 -191 5 729 477 244 118 0 chr13 18924567 18924686 -101359626 + RSINE1 SINE B4 2 134 -31 5 729 18477 154 45 33 chr13 18925352 18926951 -101357361 - L1VL4 LINE L1 -1007 4876 3161 5 729 1491 94 16 0 chr13 18926951 18927142 -101357170 - B2_Mm2 SINE B2 0 195 2 5 729 18477 145 37 32 chr13 18927142 18927448 -101356864 - L1VL4 LINE L1 -2723 3160 2856 5 729 550 77 0 0 chr13 18927448 18927526 -101356786 - B1_Mus2 SINE Alu 0 147 70 5 729 18477 145 37 32 chr13 18927526 18929621 -101354691 - L1VL4 LINE L1 -2723 2855 765 5 729 2450 219 12 2 chr13 18929636 18930116 -101354196 - Lx7 LINE L1 -1113 6583 6099 5 729 225 0 0 0 chr13 18930637 18930662 -101353650 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 729 3636 33 2 0 chr13 18931809 18932204 -101352108 - MTA_Mm LTR MaLR 0 396 1 5 729 22 35 0 0 chr13 18933392 18933421 -101350891 + AT_rich Low_complexity Low_complexity 1 29 0 5 729 316 270 41 2 chr13 18933563 18933640 -101350672 + PB1 SINE Alu 3 79 -38 5 729 243 360 60 0 chr13 18933689 18933789 -101350523 - MER21B LTR ERV1 -482 381 276 5 729 386 350 88 26 chr13 18934726 18934999 -101349313 + Tigger16b DNA Tigger 46 335 -2 5 729 316 180 17 17 chr13 18935934 18936018 -101348294 + PB1D9 SINE Alu 44 127 0 5 729 578 304 36 0 chr13 18936215 18936353 -101347959 + RSINE1 SINE B4 17 159 -6 5 729 1669 218 87 18 chr13 18938323 18938715 -101345597 - MTD LTR MaLR 0 419 1 5 729 216 0 0 0 chr13 18938934 18938958 -101345354 + (A)n Simple_repeat Simple_repeat 1 24 0 5 729 1948 82 19 0 chr13 18938978 18939234 -101345078 + Lx3_Mus LINE L1 6749 7009 0 5 729 22 0 0 0 chr13 18939234 18939256 -101345056 + AT_rich Low_complexity Low_complexity 1 22 0 6 729 729 271 19 28 chr13 18940110 18940326 -101343986 - B3 SINE B2 -1 215 2 6 729 260 256 115 0 chr13 18942523 18942601 -101341711 + Lx8 LINE L1 7032 7118 -355 6 729 191 306 0 89 chr13 18943156 18943235 -101341077 - L2b LINE L2 -6 3369 3298 6 729 36 0 0 0 chr13 18944928 18944964 -101339348 + AT_rich Low_complexity Low_complexity 1 36 0 6 729 378 214 43 112 chr13 18945476 18945568 -101338744 + RSINE1 SINE B4 58 143 -22 6 729 306 0 0 0 chr13 18945568 18945602 -101338710 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 729 378 214 43 112 chr13 18945602 18945625 -101338687 + RSINE1 SINE B4 144 165 0 6 729 405 0 0 0 chr13 18946557 18946602 -101337710 + (TGAG)n Simple_repeat Simple_repeat 1 45 0 6 729 714 116 11 44 chr13 18948521 18948702 -101335610 + CT-rich Low_complexity Low_complexity 5 179 0 6 729 196 185 36 18 chr13 18949343 18949398 -101334914 - MIRc SINE MIR -110 158 103 6 729 459 92 0 0 chr13 18951549 18951614 -101332698 + (TC)n Simple_repeat Simple_repeat 2 66 0 6 729 1301 89 33 42 chr13 18952114 18952326 -101331986 - Lx3B LINE L1 0 6973 6764 6 729 1423 60 120 0 chr13 18952326 18952526 -101331786 + Lx3B LINE L1 6521 6744 -229 6 729 6505 80 10 7 chr13 18952658 18953552 -101330760 - L1_Mus4 LINE L1 0 6636 5740 6 729 419 201 106 115 chr13 18956108 18956316 -101327996 + MER2 DNA MER2_type 17 222 -123 6 729 219 103 0 0 chr13 18956457 18956496 -101327816 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 6 729 529 270 60 86 chr13 18956503 18956793 -101327519 - MTD LTR MaLR -96 323 1 6 729 2490 40 0 7 chr13 18956851 18957156 -101327156 + L1Md_F3 LINE L1 6281 6583 -1 6 729 710 230 97 131 chr13 18957505 18957795 -101326517 - B4 SINE B4 -2 290 11 6 729 983 264 0 0 chr13 18959403 18959611 -101324701 + B3 SINE B2 2 209 -7 6 729 309 51 0 0 chr13 18961351 18961390 -101322922 + (TTA)n Simple_repeat Simple_repeat 2 40 0 6 729 282 116 0 0 chr13 18961755 18961798 -101322514 + (TGGG)n Simple_repeat Simple_repeat 2 44 0 6 729 206 62 31 0 chr13 18962124 18962156 -101322156 + (GAAA)n Simple_repeat Simple_repeat 3 35 0 6 729 354 278 40 4 chr13 18964589 18964756 -101319556 + B4A SINE B4 6 216 -76 6 729 2962 46 52 0 chr13 18965499 18965868 -101318444 + RLTR10 LTR ERVK 1 388 -2 6 729 288 287 33 53 chr13 18967312 18967463 -101316849 - LTR33B LTR ERVL -333 170 23 6 729 333 118 0 0 chr13 18967625 18967676 -101316636 + (TTCC)n Simple_repeat Simple_repeat 3 53 0 6 729 231 274 0 0 chr13 18967843 18967894 -101316418 + B1F SINE Alu 8 58 -91 6 729 656 29 49 0 chr13 18969000 18969102 -101315210 - L1Md_F3 LINE L1 -2 6582 6476 6 729 1245 259 15 27 chr13 18969408 18969741 -101314571 - ORR1D2 LTR MaLR -33 337 9 6 729 2331 67 61 3 chr13 18970136 18970507 -101313805 - Lx4A LINE L1 -1128 5930 5534 6 729 7067 137 36 19 chr13 18970507 18970576 -101313736 + Lx4A LINE L1 5893 5973 -1085 6 729 1156 88 0 0 chr13 18970576 18970723 -101313589 + B1_Mus1 SINE Alu 1 147 -1 6 729 980 61 0 8 chr13 18970732 18970865 -101313447 + (GAA)n Simple_repeat Simple_repeat 2 133 0 6 729 7067 137 36 19 chr13 18970865 18971928 -101312384 + Lx4A LINE L1 5974 7054 -4 6 729 7265 100 24 7 chr13 18972064 18973371 -101310941 - L1_Mus4 LINE L1 0 6636 5314 6 729 8659 96 5 14 chr13 18973370 18975452 -101308860 - L1VL4 LINE L1 -1469 2090 29 6 729 23 33 0 0 chr13 18975578 18975608 -101308704 + AT_rich Low_complexity Low_complexity 1 30 0 6 729 246 277 78 28 chr13 18976109 18976250 -101308062 + L1M5 LINE L1 5534 5681 -513 6 729 4546 114 44 61 chr13 18976965 18977788 -101306524 + RMER17D2 LTR ERVK 1 809 0 6 729 1113 278 103 65 chr13 18978428 18979130 -101305182 - L1MB3 LINE L1 -39 6144 5417 6 729 426 291 159 41 chr13 18979423 18979788 -101304524 - MER99 DNA hAT? 0 831 424 6 729 769 250 114 5 chr13 18979788 18979937 -101304375 + B3 SINE B2 3 171 -45 6 729 476 45 0 29 chr13 18979937 18980005 -101304307 + (CCCTAA)n Simple_repeat Simple_repeat 3 68 0 6 729 769 250 114 5 chr13 18980005 18980048 -101304264 + B3 SINE B2 172 215 -1 6 729 272 301 102 24 chr13 18980439 18980606 -101303706 - MER99 DNA hAT? -433 398 219 6 729 3866 216 25 33 chr13 18980622 18981021 -101303291 - Lx6 LINE L1 -180 7280 6842 6 729 423 0 0 0 chr13 18981021 18981068 -101303244 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 729 4337 226 42 16 chr13 18981068 18982039 -101302273 - Lx6 LINE L1 -630 6830 5835 6 729 3472 159 55 7 chr13 18982037 18982656 -101301656 - L1_Mur3 LINE L1 -1180 4700 4054 6 729 297 0 0 0 chr13 18982656 18982689 -101301623 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 729 3472 159 55 7 chr13 18982689 18982760 -101301552 - L1_Mur3 LINE L1 -1827 4053 3977 6 729 3016 163 124 19 chr13 18982754 18983666 -101300646 - L1_Mur3 LINE L1 -3838 2042 1030 6 729 231 273 34 114 chr13 18983666 18983815 -101300497 - RLTR43A LTR ERVK 0 364 228 6 729 1140 255 42 166 chr13 18983824 18984530 -101299782 - RMER1B Other Other -498 568 40 6 729 353 303 30 2 chr13 18986781 18986890 -101297422 - B1F SINE Alu 0 149 39 6 729 26 0 0 0 chr13 18986946 18986972 -101297340 + AT_rich Low_complexity Low_complexity 1 26 0 6 729 404 338 35 7 chr13 18987500 18987643 -101296669 + RSINE1 SINE B4 1 147 -18 6 729 189 0 0 0 chr13 18987677 18987698 -101296614 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 6 729 3147 254 52 11 chr13 18987718 18988592 -101295720 + L1_Mur3 LINE L1 127 1035 -6693 6 729 858 173 7 7 chr13 18988796 18988947 -101295365 + RMER1A Other Other 403 553 -477 6 729 322 266 88 9 chr13 18988947 18989061 -101295251 - MTE2b LTR MaLR -227 152 31 6 729 195 69 0 0 chr13 18989067 18989096 -101295216 + (G)n Simple_repeat Simple_repeat 1 29 0 6 729 22 35 0 0 chr13 18989439 18989468 -101294844 + AT_rich Low_complexity Low_complexity 1 29 0 6 729 7378 85 26 6 chr13 18989604 18990607 -101293705 + RLTR13D5 LTR ERVK 1 1023 0 6 729 298 146 0 0 chr13 18990607 18990655 -101293657 - L1_Mm LINE L1 -394 5489 5442 6 729 572 142 93 9 chr13 18990667 18990774 -101293538 + RLTR13C2 LTR ERVK 693 808 0 6 729 1632 200 231 39 chr13 18991005 18991681 -101292631 - RLTR13D1 LTR ERVK 0 806 1 6 729 401 36 18 0 chr13 18991752 18991807 -101292505 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 729 2331 266 59 20 chr13 18992149 18993265 -101291047 + L1_Mur3 LINE L1 1191 2393 -3484 6 729 2175 131 54 114 chr13 18993460 18993978 -101290334 + RMER19B LTR ERVK 413 899 -3 6 729 750 181 0 0 chr13 18994557 18994701 -101289611 + CT-rich Low_complexity Low_complexity 1 144 0 6 729 1020 152 97 0 chr13 18994701 18994918 -101289394 - Lx3A LINE L1 0 6981 6744 6 729 470 330 119 84 chr13 18994918 18995345 -101288967 - MLT1F2 LTR MaLR -47 513 72 6 729 868 313 67 12 chr13 18996666 18997009 -101287303 - ORR1D2 LTR MaLR -8 362 1 6 729 1307 235 122 29 chr13 18997009 18997419 -101286893 - ORR1D2-int LTR MaLR -54 1526 946 6 729 1350 226 197 21 chr13 18997425 18997957 -101286355 - ORR1D2-int LTR MaLR -740 630 5 6 729 1133 299 31 6 chr13 18997974 18998331 -101285981 - ORR1D2 LTR MaLR -4 366 1 6 729 497 271 8 0 chr13 18998499 18998617 -101285695 - B3A SINE B2 -79 119 1 6 729 243 333 0 19 chr13 18998768 18998875 -101285437 - L1M2 LINE L1 -2133 4010 3906 6 729 429 20 0 0 chr13 18998952 18999002 -101285310 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 729 542 296 49 76 chr13 18999002 18999451 -101284861 - L1M2 LINE L1 -2477 3666 3230 6 729 2211 259 28 22 chr13 18999457 18999998 -101284314 + RMER1C Other Other 558 1101 -241 6 729 613 171 9 0 chr13 19000000 19000111 -101284201 + RMER1C Other Other 1104 1215 -127 1 729 327 222 0 0 chr13 19000111 19000192 -101284120 + CT-rich Low_complexity Low_complexity 1 81 0 2 729 548 231 22 0 chr13 19000194 19000328 -101283984 + RMER1C Other Other 1202 1338 -4 1 729 307 275 146 88 chr13 19000324 19001017 -101283295 - L1M2 LINE L1 -2904 3239 2507 3 729 42 36 0 0 chr13 19001025 19001081 -101283231 + AT_rich Low_complexity Low_complexity 1 56 0 4 729 1612 124 133 14 chr13 19001208 19001442 -101282870 + ORR1A4 LTR MaLR 1 260 -69 5 729 189 0 0 0 chr13 19001442 19001463 -101282849 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 729 1612 124 133 14 chr13 19001463 19001522 -101282790 + ORR1A4 LTR MaLR 261 329 0 5 729 717 259 83 28 chr13 19002090 19002308 -101282004 + MTD LTR MaLR 190 419 0 7 729 271 314 0 0 chr13 19002401 19002506 -101281806 + L1_Rod LINE L1 1560 1664 -4183 8 729 641 271 107 92 chr13 19002579 19003184 -101281128 + L1M2 LINE L1 4412 5025 -1118 9 729 504 263 73 45 chr13 19003184 19003363 -101280949 + B3A SINE B2 1 184 -14 1 729 1223 273 55 18 chr13 19003424 19003914 -101280398 + Lx2B LINE L1 5396 5900 -1100 1 729 534 257 100 0 chr13 19004186 19004396 -101279916 + L1M2 LINE L1 4401 4631 -1512 1 729 315 360 17 90 chr13 19004644 19004821 -101279491 - MER57C2 LTR ERV1 -25 409 246 1 91 1890 148 54 88 chr13 19005055 19005462 -101278850 - RLTR9C LTR ERVK 0 393 1 1 730 529 271 106 12 chr13 19005997 19006251 -101278061 - Lx9 LINE L1 0 7644 7367 1 730 264 407 11 11 chr13 19006702 19006886 -101277426 + L2 LINE L2 2233 2416 -1003 1 730 287 250 27 27 chr13 19007372 19007446 -101276866 - MER2 DNA MER2_type -27 318 245 1 730 438 20 0 0 chr13 19007459 19007510 -101276802 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 730 324 0 0 0 chr13 19007510 19007545 -101276767 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 730 1250 261 75 51 chr13 19007549 19007953 -101276359 + MTD LTR MaLR 1 405 -14 2 730 2995 189 28 25 chr13 19008602 19009317 -101274995 + Lx4B LINE L1 6228 6981 -19 2 730 25 75 0 0 chr13 19009317 19009370 -101274942 + AT_rich Low_complexity Low_complexity 1 53 0 2 730 1171 296 131 52 chr13 19010475 19010904 -101273408 - Lx8 LINE L1 -816 7359 6885 2 730 796 236 78 5 chr13 19010904 19011096 -101273216 - B3 SINE B2 -9 207 2 2 730 1171 296 131 52 chr13 19011096 19011532 -101272780 - Lx8 LINE L1 -1291 6884 6416 2 730 2120 88 6 50 chr13 19011532 19011869 -101272443 - RLTRETN_Mm LTR ERVK 0 322 1 2 730 1171 295 52 37 chr13 19011869 19012200 -101272112 - Lx8 LINE L1 -1760 6415 6051 2 730 2111 338 75 6 chr13 19012241 19013309 -101271003 - Lx8 LINE L1 -60 7413 6272 2 730 411 249 76 16 chr13 19013360 19013544 -101270768 - Lx8 LINE L1 -478 6104 5910 2 730 1083 126 22 0 chr13 19013548 19013730 -101270582 - Lx3C LINE L1 -266 6710 6525 2 730 604 300 11 41 chr13 19013741 19013863 -101270449 - L1M2 LINE L1 -1163 4980 4859 2 730 2784 71 42 8 chr13 19013863 19014246 -101270066 - MTA_Mm LTR MaLR 0 396 1 2 730 604 300 11 41 chr13 19014246 19014391 -101269921 - L1M2 LINE L1 -1285 4858 4721 2 730 269 26 26 0 chr13 19014408 19014446 -101269866 + (TAA)n Simple_repeat Simple_repeat 1 39 0 3 730 773 194 12 6 chr13 19014948 19015109 -101269203 + RMER1B Other Other 45 206 -860 3 730 2022 244 46 65 chr13 19015143 19016026 -101268286 + RMER1B Other Other 2 1052 -14 3 730 50 80 0 0 chr13 19016028 19016141 -101268171 + AT_rich Low_complexity Low_complexity 1 113 0 3 730 1378 279 187 23 chr13 19016144 19017522 -101266790 - Lx8 LINE L1 -1221 5361 3758 2 730 643 307 83 28 chr13 19017587 19018085 -101266227 - Lx8 LINE L1 -4011 2571 2083 2 730 248 260 79 47 chr13 19018134 19018348 -101265964 - L1_Rod LINE L1 -6463 709 489 3 730 709 286 159 19 chr13 19018518 19019002 -101265310 - L1M3 LINE L1 -825 5321 4770 3 730 424 301 54 0 chr13 19019325 19019482 -101264830 + L1MC4 LINE L1 6737 6896 -1146 3 730 208 0 30 30 chr13 19019482 19019515 -101264797 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3 730 424 301 54 0 chr13 19019515 19019543 -101264769 + L1MC4 LINE L1 6897 6931 -1111 3 730 1420 86 50 0 chr13 19019552 19019774 -101264538 - Lx2A1 LINE L1 -8 7000 6768 3 730 3821 110 22 1 chr13 19019787 19020434 -101263878 - Lx2A1 LINE L1 -841 6167 5476 3 730 288 221 151 46 chr13 19020442 19020594 -101263718 + L1MC4 LINE L1 6964 7131 -911 3 730 3456 76 7 2 chr13 19021260 19021721 -101262591 - L1_Mus3 LINE L1 0 6638 6176 3 730 360 337 45 118 chr13 19022056 19022436 -101261876 - MLT1B LTR MaLR 0 390 39 4 730 627 158 74 8 chr13 19023091 19023212 -101261100 - B1_Mus2 SINE Alu -2 145 17 4 730 6889 37 30 2 chr13 19023217 19024049 -101260263 - RLTR13A LTR ERVK 0 855 1 4 730 43104 36 12 7 chr13 19024064 19025848 -101258464 - ETnERV3-int LTR ERVK -6 5802 4010 4 730 180 97 0 0 chr13 19025848 19025879 -101258433 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 4 730 43104 85 15 8 chr13 19025879 19030373 -101253939 - ETnERV3-int LTR ERVK -1799 4009 188 4 730 977 143 11 21 chr13 19030928 19031114 -101253198 - ETnERV3-int LTR ERVK -5622 186 3 4 730 6889 37 30 2 chr13 19031116 19031948 -101252364 - RLTR13A LTR ERVK 0 855 1 4 730 650 318 136 30 chr13 19032020 19032351 -101251961 + MER47B DNA MER2_type 1 366 0 4 730 2326 89 9 3 chr13 19032987 19033312 -101251000 + ORR1A2 LTR MaLR 1 327 0 4 730 10635 116 84 15 chr13 19033312 19035148 -101249164 + ORR1A2-int LTR MaLR 1 1963 0 4 730 1518 86 249 8 chr13 19035148 19035405 -101248907 + ORR1A2 LTR MaLR 1 319 -8 4 730 1718 200 0 24 chr13 19036814 19037142 -101247170 - RLTR31_Mur LTR ERVK 0 553 234 4 730 255 315 75 53 chr13 19038166 19038260 -101246052 + MER81 DNA AcHobo 3 98 -16 4 730 198 0 0 0 chr13 19038396 19038418 -101245894 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 730 516 160 53 0 chr13 19038980 19039074 -101245238 + B1_Mur2 SINE Alu 14 112 -37 4 730 244 273 13 0 chr13 19040156 19040233 -101244079 + CT-rich Low_complexity Low_complexity 3 80 0 5 730 639 0 0 0 chr13 19041251 19041322 -101242990 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 730 231 291 12 0 chr13 19043674 19043760 -101240552 + (TA)n Simple_repeat Simple_repeat 2 88 0 5 730 207 100 0 0 chr13 19045201 19045231 -101239081 + (A)n Simple_repeat Simple_repeat 1 30 0 5 730 231 311 29 19 chr13 19045565 19045670 -101238642 + MLT1A1 LTR MaLR 25 130 -278 5 730 450 0 0 0 chr13 19045707 19045757 -101238555 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 730 408 257 20 0 chr13 19045810 19045911 -101238401 + MLT1A1 LTR MaLR 294 396 -12 5 730 357 24 0 0 chr13 19046271 19046313 -101237999 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 730 290 67 0 22 chr13 19047273 19047319 -101236993 + (TAA)n Simple_repeat Simple_repeat 1 45 0 5 730 29 78 0 0 chr13 19047328 19047392 -101236920 + AT_rich Low_complexity Low_complexity 1 64 0 5 730 220 316 77 58 chr13 19048989 19049093 -101235219 + MER5B DNA MER1_type 55 160 -18 5 730 23 0 0 0 chr13 19049578 19049601 -101234711 + AT_rich Low_complexity Low_complexity 1 23 0 6 730 38881 14 2 6 chr13 19049883 19056115 -101228197 - L1Md_A LINE L1 -1 6581 386 6 730 284 318 101 0 chr13 19056358 19056487 -101227825 + ID_B1 SINE B4 81 222 -2 6 730 526 294 107 17 chr13 19056923 19057214 -101227098 - L1M4 LINE L1 -1430 4716 4400 6 730 1286 241 95 33 chr13 19057295 19057684 -101226628 + MTD LTR MaLR 1 405 -14 6 730 1244 68 0 0 chr13 19057807 19057954 -101226358 - B1_Mus1 SINE Alu 0 148 2 6 730 1688 149 98 12 chr13 19057955 19058281 -101226031 - ORR1B1 LTR MaLR -40 354 1 6 730 1532 201 24 44 chr13 19059370 19059709 -101224603 - MTD LTR MaLR -85 334 3 6 730 212 149 21 0 chr13 19059710 19059757 -101224555 + (CAA)n Simple_repeat Simple_repeat 1 48 0 6 730 333 0 0 0 chr13 19060045 19060082 -101224230 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 730 1210 231 144 62 chr13 19060695 19061036 -101223276 + ORR1D2 LTR MaLR 2 370 0 7 730 2265 88 3 3 chr13 19062984 19063280 -101221032 + L1_Mus2 LINE L1 6271 6566 0 7 730 808 100 0 8 chr13 19063892 19064013 -101220299 - L1_Mus1 LINE L1 0 6567 6448 7 730 1209 236 136 6 chr13 19064459 19064783 -101219529 + ORR1D1 LTR MaLR 1 366 -8 7 730 6717 134 28 2 chr13 19065328 19066789 -101217523 + Lx LINE L1 5157 6654 0 7 730 951 238 113 124 chr13 19067283 19067620 -101216692 - ORR1E LTR MaLR -4 355 33 7 730 432 0 0 0 chr13 19067620 19067668 -101216644 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 730 951 238 113 124 chr13 19067668 19067685 -101216627 - ORR1E LTR MaLR -327 32 5 7 730 230 271 0 0 chr13 19068087 19068135 -101216177 + MER2 DNA MER2_type 226 273 -72 7 730 891 281 75 45 chr13 19068193 19068663 -101215649 + L1MB5 LINE L1 5673 6156 -18 7 730 622 360 9 0 chr13 19068724 19068935 -101215377 + ID_B1 SINE B4 2 214 -10 7 730 451 171 0 0 chr13 19069006 19069076 -101215236 + Lx9 LINE L1 7309 7378 -266 8 730 440 156 33 0 chr13 19069071 19069161 -101215151 + Lx9 LINE L1 7551 7643 -1 8 730 867 253 5 0 chr13 19070499 19070685 -101213627 - B3 SINE B2 -28 188 2 8 730 536 0 0 15 chr13 19070788 19070853 -101213459 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 8 730 1568 58 0 20 chr13 19071006 19071201 -101213111 - B2_Mm2 SINE B2 -3 192 2 8 730 615 288 77 8 chr13 19072588 19072823 -101211489 + MLT1D LTR MaLR 3 253 -252 8 730 622 50 0 0 chr13 19074041 19074121 -101210191 + B2_Mm1t SINE B2 2 81 -112 8 730 345 82 0 0 chr13 19074131 19074180 -101210132 + (A)n Simple_repeat Simple_repeat 1 49 0 8 730 312 102 0 0 chr13 19075305 19075354 -101208958 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 730 717 289 58 29 chr13 19075357 19075599 -101208713 - B4 SINE B4 -27 265 17 8 730 252 0 0 0 chr13 19076535 19076563 -101207749 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 730 261 0 0 0 chr13 19076563 19076591 -101207721 + (GA)n Simple_repeat Simple_repeat 1 29 0 9 730 384 274 95 0 chr13 19076939 19077034 -101207278 + PB1D10 SINE Alu 3 106 -11 9 730 257 51 26 0 chr13 19077034 19077073 -101207239 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 9 730 687 57 0 0 chr13 19077652 19077740 -101206572 + (TCC)n Simple_repeat Simple_repeat 2 89 0 9 730 522 0 0 0 chr13 19077872 19077930 -101206382 + (TC)n Simple_repeat Simple_repeat 1 58 0 9 730 340 339 162 20 chr13 19079140 19079534 -101204778 + L2a LINE L2 2549 2998 -421 9 730 1315 251 86 18 chr13 19079688 19080025 -101204287 - Lx8 LINE L1 -705 6768 6409 9 730 524 333 86 0 chr13 19080057 19080255 -101204057 + Lx8 LINE L1 6214 6428 -1045 9 730 185 338 13 13 chr13 19080278 19080353 -101203959 + L2a LINE L2 3352 3426 0 9 730 229 291 56 37 chr13 19080801 19080908 -101203404 - PB1D10 SINE Alu -8 109 1 9 730 4850 110 1 46 chr13 19083041 19083754 -101200558 - Lx LINE L1 -6 6648 5968 9 730 4939 147 12 0 chr13 19083757 19084531 -101199781 + L1_Mm LINE L1 5101 5883 0 1 730 2006 263 53 68 chr13 19084848 19085652 -101198660 + RLTR40 LTR ERVK 1 792 -25 1 730 2435 102 6 33 chr13 19085740 19086076 -101198236 - IAPLTR2b LTR ERVK 0 327 1 1 730 55560 26 11 20 chr13 19086078 19092610 -101191702 - IAPEz-int LTR ERVK -2 6479 9 1 730 2458 95 6 33 chr13 19092611 19092947 -101191365 - IAPLTR2b LTR ERVK 0 327 1 1 730 183 42 0 0 chr13 19093455 19093479 -101190833 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 730 229 196 0 0 chr13 19094080 19094126 -101190186 + CT-rich Low_complexity Low_complexity 1 46 0 1 730 324 70 0 0 chr13 19094126 19094169 -101190143 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 730 370 264 33 115 chr13 19096852 19097096 -101187216 + L1MC5 LINE L1 6714 6937 -1024 1 730 282 56 0 0 chr13 19097111 19097147 -101187165 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 730 257 303 31 92 chr13 19097751 19097849 -101186463 - MT2B LTR ERVL -343 258 167 1 730 313 393 0 0 chr13 19097762 19097851 -101186461 - B1F SINE Alu -60 89 1 1 730 237 164 41 0 chr13 19098705 19098778 -101185534 + (TCTA)n Simple_repeat Simple_repeat 4 79 0 1 730 658 210 117 164 chr13 19098835 19099109 -101185203 - MTD LTR MaLR -44 375 115 1 730 547 177 62 0 chr13 19099245 19099358 -101184954 - MTD LTR MaLR -299 120 1 1 730 229 212 54 86 chr13 19099499 19099592 -101184720 - Charlie1 DNA MER1_type -2575 206 117 1 730 414 0 0 0 chr13 19099706 19099752 -101184560 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 730 255 157 0 0 chr13 19100055 19100106 -101184206 + (TTG)n Simple_repeat Simple_repeat 3 53 0 1 730 534 57 0 0 chr13 19100268 19100338 -101183974 + (GA)n Simple_repeat Simple_repeat 2 71 0 1 730 458 289 152 5 chr13 19101289 19101487 -101182825 + Charlie1b DNA MER1_type 4 230 -293 1 730 248 0 0 30 chr13 19101770 19101803 -101182509 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 1 730 368 88 18 0 chr13 19102533 19102590 -101181722 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 730 187 283 138 28 chr13 19102943 19103052 -101181260 - MIRc SINE MIR -64 204 84 1 730 30 0 0 0 chr13 19103131 19103161 -101181151 + AT_rich Low_complexity Low_complexity 1 30 0 1 730 2966 62 5 0 chr13 19103172 19103542 -101180770 + L1Md_F2 LINE L1 5824 6195 -387 1 730 1109 36 0 146 chr13 19103591 19103755 -101180557 + B1_Mm SINE Alu 3 142 -5 1 730 219 322 85 25 chr13 19104021 19104139 -101180173 + L3 LINE CR1 4164 4288 -201 1 730 4038 171 34 16 chr13 19105562 19106267 -101178045 + Lx3C LINE L1 6255 6972 -4 1 730 28 71 0 0 chr13 19106556 19106612 -101177700 + AT_rich Low_complexity Low_complexity 1 56 0 1 730 189 107 0 0 chr13 19106865 19106893 -101177419 + (TATG)n Simple_repeat Simple_repeat 3 30 0 1 730 388 280 45 8 chr13 19107202 19107335 -101176977 + B1F SINE Alu 10 147 -2 1 730 506 328 82 37 chr13 19107596 19107865 -101176447 + LTR33A_ LTR ERVL 18 298 -233 1 730 2512 99 0 27 chr13 19108611 19108976 -101175336 - L1Md_F2 LINE L1 0 6582 6228 1 730 23 0 0 0 chr13 19109419 19109442 -101174870 + AT_rich Low_complexity Low_complexity 1 23 0 1 730 563 257 165 6 chr13 19109522 19109698 -101174614 + B3 SINE B2 3 206 -10 1 730 526 314 48 0 chr13 19109864 19110052 -101174260 + MER33 DNA MER1_type 1 197 -127 1 730 266 177 65 0 chr13 19110076 19110138 -101174174 + MER33 DNA MER1_type 255 320 -4 1 730 275 302 112 0 chr13 19111287 19111403 -101172909 + MLT1B LTR MaLR 4 132 -258 1 730 2046 304 73 35 chr13 19111869 19112973 -101171339 + Lx8 LINE L1 6127 7272 -201 1 730 2723 206 36 14 chr13 19112983 19113435 -101170877 + RLTR20B1 LTR ERVK 1 454 -109 1 730 522 0 0 0 chr13 19113435 19113493 -101170819 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 730 2723 206 36 14 chr13 19113493 19113591 -101170721 + RLTR20B1 LTR ERVK 455 562 -1 1 730 425 226 64 75 chr13 19113591 19113778 -101170534 + Lx8 LINE L1 7289 7473 0 1 730 431 286 114 45 chr13 19113779 19113999 -101170313 + MLT1B LTR MaLR 81 315 -75 1 730 236 234 0 0 chr13 19115294 19115358 -101168954 - Lx8 LINE L1 -1083 6390 6327 1 730 329 43 21 0 chr13 19115583 19115630 -101168682 + (TTCA)n Simple_repeat Simple_repeat 4 51 0 1 730 980 50 31 12 chr13 19119460 19119622 -101164690 + (TCTA)n Simple_repeat Simple_repeat 2 166 0 1 730 3446 25 2 0 chr13 19120201 19120596 -101163716 - MTA_Mm LTR MaLR 0 396 1 1 730 26 0 0 0 chr13 19120732 19120758 -101163554 + AT_rich Low_complexity Low_complexity 1 26 0 1 730 783 265 57 20 chr13 19122930 19123247 -101161065 + MTE2b LTR MaLR 3 412 -7 1 730 945 264 84 11 chr13 19124750 19125091 -101159221 - MTE2b LTR MaLR 0 379 15 1 730 514 287 105 10 chr13 19126116 19126429 -101157883 - L1MA5 LINE L1 0 6300 5958 1 730 24 0 0 0 chr13 19126723 19126747 -101157565 + AT_rich Low_complexity Low_complexity 1 24 0 1 730 198 150 0 0 chr13 19127832 19127872 -101156440 + (CAGA)n Simple_repeat Simple_repeat 4 43 0 1 730 1867 170 3 0 chr13 19128993 19129335 -101154977 + Lx3B LINE L1 6577 6919 -54 1 730 25 51 0 0 chr13 19129344 19129383 -101154929 + AT_rich Low_complexity Low_complexity 1 39 0 1 730 697 110 8 8 chr13 19129396 19129515 -101154797 + (GAAA)n Simple_repeat Simple_repeat 3 121 0 1 730 2159 176 37 15 chr13 19130310 19130719 -101153593 - MTD LTR MaLR -1 418 1 1 730 270 373 26 36 chr13 19131038 19131230 -101153082 + MIR SINE MIR 41 230 -32 1 730 984 230 314 31 chr13 19131947 19132235 -101152077 + ORR1D2 LTR MaLR 1 370 0 1 730 710 247 70 16 chr13 19133587 19133772 -101150540 - MTC LTR MaLR -221 200 6 1 730 1568 236 57 67 chr13 19134405 19134946 -101149366 + Lx7 LINE L1 7161 7696 0 1 730 206 209 0 0 chr13 19136414 19136457 -101147855 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 731 256 371 63 25 chr13 19137436 19137667 -101146645 - MIRb SINE MIR 0 276 35 1 731 235 0 57 0 chr13 19138673 19138708 -101145604 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 1 731 390 304 73 39 chr13 19138916 19139094 -101145218 + MER106B DNA MER1_type 870 1053 -6 1 731 1044 269 179 8 chr13 19139661 19140054 -101144258 - MT2A LTR ERVL -70 463 4 1 731 417 329 55 126 chr13 19141243 19141647 -101142665 + MTEa LTR MaLR 1 375 -4 1 731 241 255 0 18 chr13 19142876 19142932 -101141380 - MER46C DNA MER2_type -21 317 263 1 731 261 326 173 20 chr13 19143790 19143940 -101140372 - MER5A DNA MER1_type -2 187 15 1 731 812 293 99 37 chr13 19144398 19144994 -101139318 + L1MD LINE L1 2978 3610 -2536 1 731 793 167 0 7 chr13 19145687 19145811 -101138501 - URR1B DNA MER1_type 0 225 103 1 731 778 226 22 131 chr13 19145811 19146144 -101138168 - RLTR31_Mm LTR ERVK 0 561 224 1 731 470 299 24 18 chr13 19148192 19148359 -101135953 + Lx8 LINE L1 6861 7028 -445 1 731 767 294 59 28 chr13 19148648 19148935 -101135377 - RLTR16 LTR ERVK -207 298 3 1 731 297 0 0 0 chr13 19148941 19148974 -101135338 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 731 465 277 89 12 chr13 19148974 19149142 -101135170 + Lx8 LINE L1 7036 7216 -257 1 731 567 43 0 0 chr13 19149194 19149264 -101135048 + (TCCC)n Simple_repeat Simple_repeat 3 72 0 1 731 195 100 0 0 chr13 19149264 19149294 -101135018 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 1 731 240 312 57 101 chr13 19149295 19149523 -101134789 + Lx8 LINE L1 7244 7461 -12 1 731 225 250 0 0 chr13 19150020 19150068 -101134244 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 731 36213 42 2 3 chr13 19151163 19157634 -101126678 - L1Md_T LINE L1 0 6585 22 1 731 242 343 72 63 chr13 19158273 19158531 -101125781 - RSINE1 SINE B4 -18 274 11 1 731 236 249 64 0 chr13 19158721 19158792 -101125520 - MIRc SINE MIR -61 147 66 1 731 2457 200 92 23 chr13 19158829 19159479 -101124833 - Lx9 LINE L1 -9 7635 6941 1 731 399 274 0 0 chr13 19159521 19159627 -101124685 + Lx9 LINE L1 6602 6707 -937 1 731 223 191 68 68 chr13 19159944 19160017 -101124295 + MIR SINE MIR 93 165 -97 1 731 719 300 117 23 chr13 19160172 19160523 -101123789 + MLT1B LTR MaLR 2 385 -5 1 731 186 133 0 0 chr13 19161580 19161610 -101122702 + (TTA)n Simple_repeat Simple_repeat 1 30 0 1 731 860 250 34 0 chr13 19161611 19161787 -101122525 - B3 SINE B2 -8 208 27 1 731 1138 63 23 6 chr13 19161800 19161976 -101122336 - L1Md_A LINE L1 0 6582 6404 1 731 3341 25 5 2 chr13 19162504 19162899 -101121413 + MTA_Mm LTR MaLR 1 396 0 1 731 419 125 0 14 chr13 19163654 19163727 -101120585 + (TCC)n Simple_repeat Simple_repeat 2 73 0 1 731 253 326 107 80 chr13 19167078 19167265 -101117047 - MLT1I LTR MaLR -122 289 98 1 731 250 308 65 0 chr13 19167406 19167513 -101116799 - Tigger7 DNA MER2_type -53 2438 2325 1 731 562 279 226 25 chr13 19167522 19167682 -101116630 - Tigger7 DNA MER2_type -2017 474 300 1 731 240 35 0 0 chr13 19167682 19167711 -101116601 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 731 562 279 226 25 chr13 19167711 19167944 -101116368 - Tigger7 DNA MER2_type -2192 299 2 1 731 338 221 29 0 chr13 19170368 19170436 -101113876 + PB1D10 SINE Alu 40 109 -8 1 731 580 291 27 69 chr13 19170947 19171163 -101113149 - B3A SINE B2 -13 203 2 1 731 471 35 0 0 chr13 19171403 19171460 -101112852 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 731 513 223 62 0 chr13 19171461 19171573 -101112739 - RSINE1 SINE B4 -44 121 3 1 731 212 261 15 30 chr13 19171598 19171665 -101112647 - MIRb SINE MIR -27 241 176 1 731 417 39 0 0 chr13 19171781 19171832 -101112480 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 731 2246 281 22 31 chr13 19172420 19173197 -101111115 - Lx9 LINE L1 -506 7138 6369 1 731 261 0 0 0 chr13 19173629 19173658 -101110654 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 1 731 1181 55 7 0 chr13 19173658 19173804 -101110508 - B1_Mus2 SINE Alu 0 147 1 1 731 321 287 100 18 chr13 19174050 19174160 -101110152 - MLT1A0 LTR MaLR -228 137 19 1 731 343 292 115 0 chr13 19177722 19177818 -101106494 - B1F SINE Alu -30 119 13 1 731 255 239 0 0 chr13 19179513 19179580 -101104732 - L1M3de LINE L1 -5043 1610 1544 1 731 28 29 0 0 chr13 19179949 19179984 -101104328 + AT_rich Low_complexity Low_complexity 1 35 0 2 731 195 42 0 0 chr13 19182174 19182198 -101102114 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 2 731 382 309 80 25 chr13 19183377 19183616 -101100696 - L1MEc LINE L1 -4209 2191 1940 2 731 264 178 40 14 chr13 19183768 19183842 -101100470 - L1MEc LINE L1 -4660 1755 1680 2 731 447 135 0 0 chr13 19184641 19184737 -101099575 + (TC)n Simple_repeat Simple_repeat 1 96 0 2 731 261 0 0 0 chr13 19184737 19184766 -101099546 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 731 192 77 0 0 chr13 19185518 19185544 -101098768 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 731 514 285 88 27 chr13 19186347 19186495 -101097817 + RSINE1 SINE B4 5 161 -4 2 731 1211 264 39 11 chr13 19187090 19187446 -101096866 - ORR1D2 LTR MaLR -4 366 1 2 731 487 248 30 8 chr13 19188065 19188199 -101096113 + MER3 DNA MER1_type 20 156 -53 2 731 349 302 46 38 chr13 19188672 19188803 -101095509 - B1F SINE Alu 0 149 18 2 731 521 318 8 0 chr13 19188686 19188818 -101095494 - ID_B1 SINE B4 -9 215 83 2 731 763 235 48 52 chr13 19189059 19189288 -101095024 + B4A SINE B4 5 232 -60 2 731 9517 74 25 14 chr13 19189907 19191302 -101093010 - Lx3_Mus LINE L1 -8 7001 5592 2 731 239 345 24 0 chr13 19195167 19195251 -101089061 + BC1_Mm scRNA scRNA 1 86 -66 2 731 398 36 0 18 chr13 19195433 19195490 -101088822 + (CAAAA)n Simple_repeat Simple_repeat 4 59 0 2 731 195 42 0 0 chr13 19195724 19195748 -101088564 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 731 1810 299 66 33 chr13 19198745 19198872 -101085440 - Lx8 LINE L1 -5 7468 7337 2 731 903 85 0 0 chr13 19198872 19199002 -101085310 + (TCC)n Simple_repeat Simple_repeat 3 132 0 2 731 1810 299 66 33 chr13 19199002 19199815 -101084497 - Lx8 LINE L1 -137 7336 6497 2 731 213 155 67 33 chr13 19199820 19199880 -101084432 + A-rich Low_complexity Low_complexity 4 65 0 2 731 1976 270 58 20 chr13 19199913 19200602 -101083710 - Lx7 LINE L1 -384 7312 6598 2 731 246 435 38 0 chr13 19201206 19201337 -101082975 - FordPrefect_a DNA Tip100 -71 437 302 2 731 265 294 0 0 chr13 19202689 19202774 -101081538 - L1MA10 LINE L1 -29 6305 6221 2 731 182 291 36 0 chr13 19203998 19204053 -101080259 - MIRc SINE MIR -206 62 6 2 731 441 0 0 0 chr13 19204223 19204272 -101080040 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 731 310 301 78 0 chr13 19204346 19204449 -101079863 - MTEa LTR MaLR -63 316 206 2 731 259 208 99 73 chr13 19205795 19205889 -101078423 + PB1D7 SINE Alu 9 106 -41 2 731 2060 102 3 69 chr13 19206874 19207223 -101077089 + IAPLTR1a_Mm LTR ERVK 1 326 -11 2 731 403 296 49 7 chr13 19207876 19208019 -101076293 - MER3 DNA MER1_type -60 149 1 2 731 22 0 0 0 chr13 19208155 19208177 -101076135 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 269 100 0 0 chr13 19208443 19208493 -101075819 + B1_Mus2 SINE Alu 89 138 -9 2 731 216 0 0 0 chr13 19208493 19208517 -101075795 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 731 386 351 48 11 chr13 19208603 19208790 -101075522 + MIRb SINE MIR 39 232 -36 2 731 206 62 0 30 chr13 19208887 19208920 -101075392 + (GGGAGA)n Simple_repeat Simple_repeat 1 32 0 2 731 324 0 0 0 chr13 19211963 19211999 -101072313 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 731 213 275 87 0 chr13 19212645 19212714 -101071598 + MIRb SINE MIR 172 246 -22 2 731 22 0 0 0 chr13 19213025 19213047 -101071265 + AT_rich Low_complexity Low_complexity 1 22 0 2 731 21 0 0 0 chr13 19215338 19215359 -101068953 + AT_rich Low_complexity Low_complexity 1 21 0 2 731 24 0 0 0 chr13 19215703 19215727 -101068585 + AT_rich Low_complexity Low_complexity 1 24 0 2 731 254 225 0 12 chr13 19216300 19216344 -101067968 + polypyrimidine Low_complexity Low_complexity 37 80 0 2 731 1073 75 28 17 chr13 19216344 19216521 -101067791 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 2 731 254 225 0 12 chr13 19216521 19216557 -101067755 + polypyrimidine Low_complexity Low_complexity 1 36 0 2 731 23 33 0 0 chr13 19220242 19220272 -101064040 + AT_rich Low_complexity Low_complexity 1 30 0 2 731 1308 249 94 36 chr13 19220707 19221070 -101063242 - MTD LTR MaLR -35 384 1 2 731 251 283 0 0 chr13 19221217 19221270 -101063042 + tRNA-Trp-TGG tRNA tRNA 1 53 -22 2 731 2040 159 53 41 chr13 19222247 19222640 -101061672 + RMER10B LTR ERVL 1 398 0 2 731 1293 199 82 14 chr13 19222670 19222950 -101061362 - MTD LTR MaLR -12 407 109 2 731 256 209 75 0 chr13 19224152 19224219 -101060093 + L1ME2z LINE L1 6360 6431 -13 2 731 435 19 0 0 chr13 19224586 19224638 -101059674 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 731 766 278 16 29 chr13 19226118 19226292 -101058020 + B3A SINE B2 5 178 -20 2 731 243 0 0 0 chr13 19226292 19226319 -101057993 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 731 766 279 15 73 chr13 19226319 19226353 -101057959 + B3A SINE B2 164 193 0 2 731 504 48 0 0 chr13 19226817 19226880 -101057432 + (TCCC)n Simple_repeat Simple_repeat 4 66 0 2 731 27 0 0 0 chr13 19227135 19227162 -101057150 + AT_rich Low_complexity Low_complexity 1 27 0 2 731 25 0 0 0 chr13 19227498 19227523 -101056789 + AT_rich Low_complexity Low_complexity 1 25 0 2 731 462 129 71 0 chr13 19227590 19227660 -101056652 - B3 SINE B2 -139 77 3 2 731 186 133 0 0 chr13 19228506 19228536 -101055776 + (CAA)n Simple_repeat Simple_repeat 1 30 0 2 731 4469 56 40 11 chr13 19228602 19229146 -101055166 - LTRIS2 LTR ERV1 0 564 5 2 731 501 264 215 68 chr13 19229776 19230097 -101054215 - RLTR9A LTR ERVK 0 368 1 2 731 1710 160 98 30 chr13 19230110 19230446 -101053866 - ORR1B2 LTR MaLR -8 359 1 2 731 216 282 13 53 chr13 19231934 19232009 -101052303 - ID4 SINE ID 0 83 12 2 731 243 267 123 9 chr13 19232027 19232133 -101052179 - PB1 SINE Alu -7 120 3 2 731 234 0 0 0 chr13 19232686 19232712 -101051600 + (A)n Simple_repeat Simple_repeat 1 26 0 2 731 614 49 0 12 chr13 19233565 19233648 -101050664 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 2 731 561 219 21 49 chr13 19233650 19233794 -101050518 - B1F SINE Alu -8 141 2 2 731 1305 34 0 0 chr13 19234039 19234186 -101050126 - B1_Mus2 SINE Alu 0 147 1 2 731 290 297 58 45 chr13 19234456 19234611 -101049701 + L1ME3 LINE L1 6006 6162 0 2 731 23 0 0 0 chr13 19234953 19234976 -101049336 + AT_rich Low_complexity Low_complexity 1 23 0 2 731 953 228 33 24 chr13 19235039 19235250 -101049062 + B3 SINE B2 4 216 0 2 731 321 306 9 44 chr13 19235340 19235453 -101048859 + PB1D10 SINE Alu 1 109 -8 2 731 701 287 84 111 chr13 19235707 19236087 -101048225 - MTEa LTR MaLR -5 374 5 2 731 694 265 105 0 chr13 19236096 19236296 -101048016 - MTEa-int LTR MaLR -5 1575 1355 2 731 1254 51 0 0 chr13 19236300 19236458 -101047854 + (GGAA)n Simple_repeat Simple_repeat 2 159 0 2 731 249 57 0 0 chr13 19236459 19236494 -101047818 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 2 731 245 179 0 0 chr13 19236494 19236533 -101047779 + polypurine Low_complexity Low_complexity 3 41 0 2 731 497 221 7 0 chr13 19236533 19236678 -101047634 + GA-rich Low_complexity Low_complexity 1 146 0 2 731 1598 301 228 26 chr13 19236697 19237791 -101046521 - MTEa-int LTR MaLR -266 1314 1 2 731 453 281 0 79 chr13 19237791 19237868 -101046444 - MTEa LTR MaLR 0 379 309 2 731 2217 154 79 11 chr13 19237868 19238235 -101046077 - ORR1B1 LTR MaLR 0 394 3 2 731 453 281 0 79 chr13 19238235 19238296 -101046016 - MTEa LTR MaLR -71 308 252 2 731 301 297 46 113 chr13 19238526 19238871 -101045441 - L1MEb LINE L1 -5223 847 526 2 731 331 76 6 18 chr13 19238987 19239043 -101045269 - B1_Mm SINE Alu -33 116 58 2 731 775 154 0 134 chr13 19239113 19239315 -101044997 - Lx LINE L1 -3 6651 6477 2 731 513 256 18 140 chr13 19239328 19239550 -101044762 - B3A SINE B2 -3 195 1 2 731 240 206 162 0 chr13 19247864 19247932 -101036380 - ID4_ SINE ID -2 81 3 2 731 5364 108 12 21 chr13 19247971 19248737 -101035575 - L1_Mus3 LINE L1 0 6638 5880 2 731 3727 103 0 2 chr13 19248737 19249250 -101035062 + L1_Mus3 LINE L1 5369 5880 -3 2 731 306 245 65 20 chr13 19249273 19249381 -101034931 - B1F1 SINE Alu -37 112 2 2 731 307 269 0 21 chr13 19250811 19250906 -101033406 + (TG)n Simple_repeat Simple_repeat 1 93 0 2 731 296 254 189 102 chr13 19250932 19251186 -101033126 - B4 SINE B4 -16 276 1 2 731 186 372 75 0 chr13 19251638 19251732 -101032580 + MIRb SINE MIR 92 192 -76 2 731 4672 184 57 37 chr13 19252118 19253124 -101031188 + RLTR25B LTR ERVK 1 1026 -2 2 731 1949 280 54 29 chr13 19253916 19254399 -101029913 + MMAR1 DNA Mariner 713 1222 -64 2 731 1256 63 0 0 chr13 19254399 19254542 -101029770 + B1_Mus2 SINE Alu 1 143 -4 2 731 351 0 0 0 chr13 19254544 19254583 -101029729 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2 731 1949 280 54 29 chr13 19254583 19254655 -101029657 + MMAR1 DNA Mariner 1223 1285 -1 2 731 316 341 72 27 chr13 19254715 19254938 -101029374 - L1MC5 LINE L1 -1080 6881 6649 2 731 28 86 0 0 chr13 19254982 19255052 -101029260 + AT_rich Low_complexity Low_complexity 1 70 0 2 731 2951 194 153 4 chr13 19255139 19255823 -101028489 - Lx9 LINE L1 -153 7491 6706 2 731 350 251 20 0 chr13 19255839 19255939 -101028373 - L1_Rod LINE L1 -868 5278 5127 2 731 299 275 115 1 chr13 19255956 19256115 -101028197 - L1_Mur3 LINE L1 -834 5049 4869 2 731 189 0 0 0 chr13 19256127 19256148 -101028164 + (TTAGGG)n Simple_repeat Simple_repeat 5 25 0 2 731 2897 152 16 28 chr13 19256290 19257237 -101027075 + L1VL4 LINE L1 269 1263 -2352 2 731 2239 211 47 31 chr13 19257238 19257577 -101026735 + L1_Mus3 LINE L1 557 893 -5764 2 731 294 29 0 0 chr13 19257577 19257612 -101026700 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 731 7642 105 21 5 chr13 19257612 19259382 -101024930 + L1_Mus3 LINE L1 5027 6638 0 2 731 23820 166 20 5 chr13 19259378 19263897 -101020415 + MusHAL1 LINE L1 1085 5671 -212 2 731 7956 122 35 61 chr13 19264664 19266040 -101018272 + Lx2A LINE L1 5669 7008 0 2 91 7136 152 14 1 chr13 19266054 19267686 -101016626 + Lx2B LINE L1 5094 6751 -249 2 732 1984 36 8 0 chr13 19267686 19267934 -101016378 + MTA_Mm LTR MaLR 1 250 -146 2 732 1277 221 129 0 chr13 19267937 19268209 -101016103 - RMER1B Other Other -714 352 46 3 732 562 255 86 86 chr13 19268725 19268935 -101015377 - B3 SINE B2 -6 210 1 3 732 342 292 114 8 chr13 19268978 19269109 -101015203 - B1F SINE Alu -3 146 2 3 732 666 148 0 0 chr13 19269145 19269307 -101015005 + (TC)n Simple_repeat Simple_repeat 1 162 0 3 732 186 43 0 0 chr13 19269850 19269873 -101014439 + (TCTTG)n Simple_repeat Simple_repeat 1 23 0 3 732 3834 64 0 19 chr13 19270614 19271079 -101013233 + L1_Mus1 LINE L1 6112 6567 0 3 732 28 0 0 0 chr13 19271513 19271541 -101012771 + AT_rich Low_complexity Low_complexity 1 28 0 3 732 279 0 0 0 chr13 19271821 19271852 -101012460 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 732 295 247 64 13 chr13 19273377 19273455 -101010857 + MER20 DNA MER1_type 2 83 -136 3 732 25 51 0 0 chr13 19275350 19275389 -101008923 + AT_rich Low_complexity Low_complexity 1 39 0 3 732 21 0 0 0 chr13 19275865 19275886 -101008426 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 21 0 0 0 chr13 19279562 19279583 -101004729 + AT_rich Low_complexity Low_complexity 1 21 0 3 732 440 319 42 17 chr13 19279919 19280037 -101004275 + ID_B1 SINE B4 4 124 -100 3 732 216 0 0 0 chr13 19280481 19280505 -101003807 + (A)n Simple_repeat Simple_repeat 1 24 0 3 732 351 141 0 0 chr13 19280754 19280832 -101003480 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 732 269 228 15 8 chr13 19281624 19281766 -101002546 + CT-rich Low_complexity Low_complexity 1 143 0 3 732 275 305 124 3 chr13 19284692 19284859 -100999453 - MIR3 SINE MIR -3 205 20 3 732 243 0 0 0 chr13 19285719 19285746 -100998566 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 732 247 234 0 0 chr13 19285754 19285801 -100998511 - B3A SINE B2 -149 49 3 3 732 21 89 0 0 chr13 19286466 19286522 -100997790 + AT_rich Low_complexity Low_complexity 1 56 0 3 732 207 0 0 0 chr13 19287273 19287296 -100997016 + (A)n Simple_repeat Simple_repeat 1 23 0 3 732 453 19 0 0 chr13 19288058 19288112 -100996200 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 732 428 295 125 0 chr13 19288190 19288302 -100996010 + RSINE1 SINE B4 6 131 -34 3 732 339 25 0 0 chr13 19288306 19288346 -100995966 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 732 237 286 152 6 chr13 19288399 19288564 -100995748 - MIRb SINE MIR -6 262 74 3 732 3734 83 14 0 chr13 19288938 19289444 -100994868 - L1_Mus1 LINE L1 -1 6566 6054 3 732 474 65 65 0 chr13 19289488 19289580 -100994732 - L1Md_F2 LINE L1 0 6582 6485 3 732 1704 118 27 63 chr13 19289580 19289914 -100994398 + RLTRETN_Mm LTR ERVK 1 322 0 3 732 994 129 49 102 chr13 19289915 19290140 -100994172 + MMETn-int LTR ERVK 2 214 -4630 3 732 3573 34 2 0 chr13 19290141 19290586 -100993726 - L1Md_F2 LINE L1 -534 6048 5603 3 732 2883 60 5 0 chr13 19290586 19290953 -100993359 + L1Md_F2 LINE L1 6202 6570 -12 3 732 239 53 16 66 chr13 19291033 19291094 -100993218 + (CAAAAA)n Simple_repeat Simple_repeat 2 59 0 3 732 6678 83 8 47 chr13 19291094 19292174 -100992138 + MMETn-int LTR ERVK 269 1306 -3538 3 732 7763 171 66 50 chr13 19292188 19293465 -100990847 + MMETn-int LTR ERVK 1730 3019 -4387 3 732 210 37 0 0 chr13 19293465 19293492 -100990820 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 3 732 7763 196 71 78 chr13 19293492 19295386 -100988926 + MMETn-int LTR ERVK 2717 4606 -238 3 732 240 250 67 22 chr13 19295386 19295476 -100988836 + RLTR13D6 LTR ERVK 347 440 -462 3 732 705 204 0 7 chr13 19295476 19295624 -100988688 + MMETn-int LTR ERVK 4698 4844 0 3 732 1650 128 26 85 chr13 19295624 19295966 -100988346 + RLTRETN_Mm LTR ERVK 1 322 0 3 732 3057 64 0 5 chr13 19295966 19296372 -100987940 - L1Md_F2 LINE L1 -92 6490 6087 3 732 275 320 34 4 chr13 19296628 19296736 -100987576 - B1F SINE Alu -38 109 1 3 732 683 272 99 35 chr13 19296818 19297586 -100986726 - L1MA4A LINE L1 -387 5916 5095 3 732 914 282 72 67 chr13 19298059 19298540 -100985772 - L1MA4A LINE L1 -1083 5060 4577 3 732 609 265 142 5 chr13 19298540 19298730 -100985582 - B3 SINE B2 0 216 1 3 732 914 282 72 67 chr13 19298730 19298860 -100985452 - L1MA4A LINE L1 -1567 4576 4446 3 732 26 0 0 0 chr13 19298985 19299011 -100985301 + AT_rich Low_complexity Low_complexity 1 26 0 3 732 3305 210 70 6 chr13 19299524 19300368 -100983944 - Lx9 LINE L1 -1 7643 6746 3 732 507 33 0 0 chr13 19300604 19300665 -100983647 + (GA)n Simple_repeat Simple_repeat 1 61 0 3 732 546 329 45 13 chr13 19301209 19301363 -100982949 - RSINE1 SINE B4 0 165 7 3 732 309 250 180 27 chr13 19305805 19305817 -100978495 + B1F SINE Alu 12 139 -10 3 732 405 263 141 0 chr13 19305817 19305916 -100978396 + ID_B1 SINE B4 102 214 -10 3 732 999 92 14 0 chr13 19309014 19309156 -100975156 + B1_Mm SINE Alu 2 145 -2 3 732 228 106 21 21 chr13 19309158 19309206 -100975106 + (CAAA)n Simple_repeat Simple_repeat 3 50 0 3 732 222 282 200 41 chr13 19309301 19309471 -100974841 - MIR SINE MIR -32 236 40 3 732 1477 215 26 26 chr13 19309829 19310178 -100974134 + L1_Mur2 LINE L1 5453 5801 -76 3 732 4472 188 39 6 chr13 19310206 19311159 -100973153 + Lx4B LINE L1 6037 7020 -38 3 732 456 77 0 0 chr13 19311176 19311241 -100973071 + (CATA)n Simple_repeat Simple_repeat 2 66 0 3 732 2270 90 0 0 chr13 19312819 19313131 -100971181 + L1_Mus2 LINE L1 6254 6565 -1 3 732 2786 61 50 0 chr13 19313540 19313917 -100970395 + MTA_Mm LTR MaLR 1 396 0 3 732 495 48 0 0 chr13 19314490 19314552 -100969760 + (TC)n Simple_repeat Simple_repeat 2 63 0 3 732 34449 66 2 3 chr13 19314625 19320913 -100963399 - L1Md_F2 LINE L1 -3 6579 302 3 732 31 0 0 0 chr13 19321188 19321219 -100963093 + AT_rich Low_complexity Low_complexity 1 31 0 3 732 7003 73 18 0 chr13 19321385 19322437 -100961875 - L1_Mus1 LINE L1 0 6567 5497 3 732 8664 76 7 8 chr13 19323016 19324917 -100959395 - L1Md_F2 LINE L1 -1 6581 4685 3 732 3624 71 0 2 chr13 19324918 19325443 -100958869 + L1_Mm LINE L1 1436 1959 -3924 3 732 417 186 34 0 chr13 19326022 19326140 -100958172 + CT-rich Low_complexity Low_complexity 6 127 0 3 732 1692 267 18 3 chr13 19326198 19326588 -100957724 + MTD LTR MaLR 10 405 -14 3 732 233 146 21 0 chr13 19327085 19327133 -100957179 + C-rich Low_complexity Low_complexity 6 54 0 3 732 1478 131 1 9 chr13 19328465 19328724 -100955588 - Lx2A1 LINE L1 -1278 5730 5479 3 732 270 0 0 0 chr13 19329083 19329113 -100955199 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 732 7860 33 2 1 chr13 19329738 19330964 -100953348 - L1Md_T LINE L1 -1 6581 5355 3 732 508 346 26 7 chr13 19331026 19331180 -100953132 - B4 SINE B4 -29 263 107 3 732 360 0 0 0 chr13 19331376 19331416 -100952896 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 732 289 275 50 18 chr13 19331483 19331747 -100952565 - L1M2 LINE L1 -580 5711 5445 3 732 559 266 63 29 chr13 19331971 19332137 -100952175 - B3A SINE B2 -24 192 21 3 732 414 0 0 0 chr13 19332422 19332468 -100951844 + (CAT)n Simple_repeat Simple_repeat 2 47 0 3 732 300 383 33 0 chr13 19332483 19332603 -100951709 + PB1 SINE Alu 1 124 -3 3 732 327 138 307 11 chr13 19332621 19332709 -100951603 + L1Md_F LINE L1 326 439 -6080 3 732 595 285 105 0 chr13 19332891 19333063 -100951249 - ID_B1 SINE B4 -21 203 14 3 732 256 336 65 58 chr13 19333454 19333609 -100950703 - MamRep1161 DNA TcMar -81 876 721 3 732 567 40 0 0 chr13 19334239 19334313 -100949999 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 732 1120 311 47 24 chr13 19336223 19336688 -100947624 + RMER5 LTR ERV1 48 523 -11 3 732 270 204 0 0 chr13 19336850 19336948 -100947364 + GA-rich Low_complexity Low_complexity 1 98 0 3 732 277 273 92 51 chr13 19337058 19337449 -100946863 - L1_Rod LINE L1 -4304 1576 1160 3 732 21 36 0 0 chr13 19337514 19337542 -100946770 + AT_rich Low_complexity Low_complexity 1 28 0 3 732 249 267 53 13 chr13 19338631 19338707 -100945605 + ID4 SINE ID 2 80 -3 3 732 25 0 0 0 chr13 19339591 19339616 -100944696 + AT_rich Low_complexity Low_complexity 1 25 0 3 732 28029 115 8 20 chr13 19339867 19345801 -100938511 - L1_Mus2 LINE L1 0 6566 722 3 732 430 230 23 16 chr13 19345805 19345933 -100938379 - L1_Mus2 LINE L1 -5813 803 675 3 732 362 299 7 91 chr13 19345994 19346257 -100938055 - L1VL1 LINE L1 -6030 392 28 3 732 1665 213 200 7 chr13 19346359 19347111 -100937201 - Lx9 LINE L1 -1 7643 6746 3 732 450 0 0 0 chr13 19347352 19347402 -100936910 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 732 561 347 26 13 chr13 19347963 19348115 -100936197 - RSINE1 SINE B4 0 165 12 3 732 260 208 0 54 chr13 19352587 19352643 -100931669 + B1F SINE Alu 12 64 -85 3 732 390 263 141 0 chr13 19352599 19352698 -100931614 + ID_B1 SINE B4 102 214 -10 3 732 1157 76 0 0 chr13 19355794 19355938 -100928374 + B1_Mm SINE Alu 2 145 -2 3 732 201 108 0 0 chr13 19355943 19355980 -100928332 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 3 732 222 302 202 36 chr13 19356097 19356265 -100928047 - MIR SINE MIR -32 236 41 3 732 1496 223 25 25 chr13 19356621 19356995 -100927317 + Lx8 LINE L1 5453 5828 -1645 3 732 33145 67 17 12 chr13 19357008 19362361 -100921951 + L1Md_F3 LINE L1 217 5586 -297 3 732 7727 56 6 0 chr13 19362361 19363385 -100920927 + L1Md_F3 LINE L1 5587 6584 0 3 732 4230 201 38 6 chr13 19363388 19364342 -100919970 + Lx4B LINE L1 6037 7020 -38 3 732 351 44 0 0 chr13 19364359 19364404 -100919908 + (CATA)n Simple_repeat Simple_repeat 2 46 0 3 732 2073 112 6 0 chr13 19365976 19366287 -100918025 + L1_Mus2 LINE L1 6254 6566 0 3 732 2987 40 45 0 chr13 19366696 19367075 -100917237 + MTA_Mm LTR MaLR 1 396 0 3 732 570 79 0 0 chr13 19367622 19367711 -100916601 + (TC)n Simple_repeat Simple_repeat 2 90 0 3 732 7288 74 1 0 chr13 19368188 19369255 -100915057 - L1_Mus1 LINE L1 -3 6564 5497 3 732 8920 64 8 8 chr13 19369836 19371735 -100912577 - L1Md_F2 LINE L1 0 6582 4685 3 732 3666 69 0 0 chr13 19371736 19372260 -100912052 + L1_Mm LINE L1 1436 1959 -3924 3 732 392 193 25 8 chr13 19372837 19372957 -100911355 + CT-rich Low_complexity Low_complexity 2 123 0 3 732 1596 252 61 8 chr13 19373015 19373391 -100910921 + MTD LTR MaLR 10 405 -14 3 732 180 191 14 42 chr13 19373873 19373944 -100910368 + CT-rich Low_complexity Low_complexity 3 71 0 4 732 514 340 26 7 chr13 19375456 19375610 -100908702 - B4 SINE B4 -29 263 107 4 732 420 111 0 0 chr13 19375806 19375869 -100908443 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 732 255 339 24 38 chr13 19375877 19376168 -100908144 - L1M2 LINE L1 -540 5772 5486 4 732 543 275 27 7 chr13 19376438 19376588 -100907724 - B3A SINE B2 -18 180 28 4 732 318 50 0 0 chr13 19376860 19376900 -100907412 + (CAT)n Simple_repeat Simple_repeat 2 41 0 4 732 260 342 42 8 chr13 19376915 19377033 -100907279 + PB1 SINE Alu 1 122 -5 4 732 8091 128 58 6 chr13 19377053 19379189 -100905123 + L1Md_F LINE L1 220 2465 -3418 4 732 569 302 105 0 chr13 19379258 19379430 -100904882 + ID_B1 SINE B4 14 203 -21 4 732 307 380 25 0 chr13 19380532 19380653 -100903659 - PB1 SINE Alu -3 124 1 4 732 348 24 0 0 chr13 19380668 19380709 -100903603 + (ATG)n Simple_repeat Simple_repeat 1 41 0 4 732 543 275 27 7 chr13 19380991 19381141 -100903171 + B3A SINE B2 28 180 -18 4 732 225 312 0 20 chr13 19381423 19381521 -100902791 + L1M2 LINE L1 5498 5593 -707 4 732 420 368 33 7 chr13 19381858 19382011 -100902301 + B4 SINE B4 107 263 -29 4 732 302 80 20 0 chr13 19382196 19382246 -100902066 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 732 575 80 0 0 chr13 19382678 19382753 -100901559 + L1Md_F2 LINE L1 5512 5586 -297 4 732 8154 50 1 0 chr13 19382754 19383748 -100900564 + L1Md_F2 LINE L1 5588 6582 0 4 732 2776 56 19 3 chr13 19383789 19384150 -100900162 - L1Md_F3 LINE L1 -2 6582 6216 4 732 357 24 0 0 chr13 19384381 19384423 -100899889 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 732 1544 90 17 21 chr13 19384785 19385024 -100899288 + L1_Mur1 LINE L1 5479 5716 -170 4 732 378 0 0 0 chr13 19386369 19386411 -100897901 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 732 204 179 0 0 chr13 19386885 19386924 -100897388 + GA-rich Low_complexity Low_complexity 1 39 0 4 732 21 0 0 0 chr13 19387058 19387079 -100897233 + AT_rich Low_complexity Low_complexity 1 21 0 4 732 3059 43 0 0 chr13 19387205 19387573 -100896739 + L1Md_T LINE L1 6215 6582 0 4 732 189 330 21 52 chr13 19388869 19388965 -100895347 + MIRb SINE MIR 103 195 -73 4 732 1345 58 0 0 chr13 19389947 19390119 -100894193 + L1Md_F2 LINE L1 5415 5586 -297 4 732 8219 38 0 8 chr13 19390120 19391122 -100893190 + L1Md_F2 LINE L1 5588 6581 -1 4 732 27 29 0 0 chr13 19391122 19391156 -100893156 + AT_rich Low_complexity Low_complexity 1 34 0 4 732 438 69 0 0 chr13 19392892 19392950 -100891362 + (TATG)n Simple_repeat Simple_repeat 1 58 0 4 732 4697 176 32 13 chr13 19392958 19393931 -100890381 - Lx4B LINE L1 -31 7027 6037 4 732 1585 205 23 26 chr13 19393960 19394310 -100890002 - L1_Mur2 LINE L1 -76 5801 5453 4 732 254 301 35 29 chr13 19394863 19395034 -100889278 + L1MA6 LINE L1 6102 6273 -27 4 732 234 302 93 9 chr13 19395771 19395878 -100888434 + MIR SINE MIR 120 235 -27 4 732 387 0 0 0 chr13 19395923 19395966 -100888346 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 732 564 15 0 0 chr13 19395966 19396030 -100888282 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 732 183 295 125 25 chr13 19396118 19396198 -100888114 - MIRb SINE MIR -89 179 92 4 732 21 0 0 0 chr13 19396520 19396541 -100887771 + AT_rich Low_complexity Low_complexity 1 21 0 4 733 390 263 141 0 chr13 19399475 19399574 -100884738 - ID_B1 SINE B4 -10 214 102 4 733 260 208 0 54 chr13 19399530 19399586 -100884726 - B1F SINE Alu -85 64 12 4 733 568 346 26 13 chr13 19404040 19404195 -100880117 + RSINE1 SINE B4 9 165 0 4 733 3329 51 111 23 chr13 19404358 19404801 -100879511 + LTRIS_Mm LTR ERV1 1 482 0 4 733 12586 98 6 11 chr13 19404801 19406898 -100877414 + MuRRS-int LTR ERV1 1494 3705 -3851 4 733 34251 16 36 64 chr13 19406899 19410195 -100874117 + L1Md_A LINE L1 205 3279 -2604 4 733 8818 16 0 0 chr13 19410195 19411191 -100873121 + L1Md_A LINE L1 5587 6582 0 4 733 34251 11 0 72 chr13 19411191 19413521 -100870791 + L1Md_A LINE L1 3280 5586 -297 4 733 8860 14 0 0 chr13 19413521 19414517 -100869795 + L1Md_A LINE L1 5587 6582 0 4 733 2356 163 8 25 chr13 19414530 19415258 -100869054 + MuRRS-int LTR ERV1 2716 3748 -942 4 733 6493 111 26 11 chr13 19415681 19416795 -100867517 + MuRRS-int LTR ERV1 3440 4690 0 4 733 3422 48 113 0 chr13 19416795 19417228 -100867084 + LTRIS_Mm LTR ERV1 1 482 0 4 733 536 77 13 0 chr13 19417560 19417638 -100866674 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 733 3246 216 66 8 chr13 19417892 19418737 -100865575 + Lx9 LINE L1 6750 7643 -1 4 733 24085 109 7 11 chr13 19418956 19423604 -100860708 + L1_Mus2 LINE L1 1938 6565 -1 4 733 305 313 110 15 chr13 19424145 19424281 -100860031 + L1MC LINE L1 5318 5466 -2416 4 733 663 320 115 26 chr13 19424414 19424648 -100859664 - B4 SINE B4 -2 290 36 4 733 468 0 0 0 chr13 19424683 19424735 -100859577 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 4 733 433 314 56 12 chr13 19425957 19426380 -100857932 + L1_Rod LINE L1 1147 1588 -4259 4 733 270 204 0 0 chr13 19426478 19426576 -100857736 + CT-rich Low_complexity Low_complexity 1 98 0 4 733 438 336 29 19 chr13 19426748 19426957 -100857355 - RMER5 LTR ERV1 -12 522 312 4 733 1345 160 20 24 chr13 19426958 19427208 -100857104 - RLTRETN_Mm LTR ERVK 0 322 74 4 733 636 313 68 23 chr13 19427191 19427456 -100856856 - RMER5 LTR ERV1 -221 313 37 4 733 207 0 0 0 chr13 19427758 19427781 -100856531 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 733 1174 75 0 0 chr13 19429574 19429720 -100854592 + B1_Mus2 SINE Alu 2 147 0 4 733 496 276 47 0 chr13 19430324 19430451 -100853861 - ETnERV2-int LTR ERVK -204 7202 7070 4 733 333 253 12 80 chr13 19430590 19430753 -100853559 + L1M2 LINE L1 5631 5782 -515 4 733 516 262 13 107 chr13 19431053 19431412 -100852900 - L1MA8 LINE L1 -326 5974 5650 4 733 195 368 17 25 chr13 19431549 19431669 -100852643 + MIR SINE MIR 71 189 -73 4 733 230 31 0 30 chr13 19431742 19431775 -100852537 - B1_Mm SINE Alu -8 139 108 4 733 318 326 45 0 chr13 19433328 19433417 -100850895 + B3 SINE B2 109 201 -15 4 733 24 32 0 0 chr13 19433449 19433480 -100850832 + AT_rich Low_complexity Low_complexity 1 31 0 4 733 430 184 0 0 chr13 19438943 19439019 -100845293 - B1_Mur1 SINE Alu 0 149 74 4 733 204 40 0 0 chr13 19439324 19439349 -100844963 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 733 204 40 0 0 chr13 19439351 19439376 -100844936 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 733 222 219 0 0 chr13 19439704 19439768 -100844544 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 4 733 274 326 71 18 chr13 19440127 19440352 -100843960 - L1M2 LINE L1 -4460 2389 2153 4 733 372 22 0 0 chr13 19440591 19440636 -100843676 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 733 307 333 0 0 chr13 19441852 19441933 -100842379 + ID_B1 SINE B4 81 161 -63 4 733 272 256 11 55 chr13 19441858 19441949 -100842363 + B1_Mus1 SINE Alu 9 95 -53 4 733 360 0 0 0 chr13 19442095 19442135 -100842177 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 733 181 293 198 0 chr13 19444979 19445136 -100839176 + MIR SINE MIR 11 198 -64 4 733 339 261 60 17 chr13 19446310 19446427 -100837885 - MIRb SINE MIR -121 147 26 4 733 384 303 91 0 chr13 19447122 19447254 -100837058 + B4 SINE B4 61 204 -88 4 733 256 296 102 15 chr13 19447460 19447597 -100836715 - L1MC LINE L1 -2416 5466 5318 4 733 487 251 187 0 chr13 19451221 19451392 -100832920 - B3 SINE B2 -13 203 1 4 733 1427 88 16 0 chr13 19451478 19451670 -100832642 - B2_Mm2 SINE B2 0 195 1 4 733 27 0 0 0 chr13 19451937 19451964 -100832348 + AT_rich Low_complexity Low_complexity 1 27 0 4 733 195 114 0 0 chr13 19452076 19452111 -100832201 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 733 305 277 0 0 chr13 19453218 19453283 -100831029 + MER58A DNA MER1_type 13 77 -147 4 733 1042 225 160 19 chr13 19453300 19453663 -100830649 + Lx8 LINE L1 7000 7413 -60 4 733 887 169 6 0 chr13 19453752 19453924 -100830388 + GA-rich Low_complexity Low_complexity 3 175 0 4 733 237 65 0 0 chr13 19454751 19454782 -100829530 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 733 485 311 177 31 chr13 19455247 19455671 -100828641 + Lx8 LINE L1 6864 7349 -124 4 733 1662 16 21 0 chr13 19455764 19455951 -100828361 + B2_Mm1a SINE B2 1 191 -2 4 733 234 254 45 0 chr13 19458787 19458854 -100825458 - L1MB3 LINE L1 -44 6139 6070 4 733 422 301 169 19 chr13 19458938 19459263 -100825049 - L1MB3 LINE L1 -299 5884 5511 4 733 180 0 0 0 chr13 19460613 19460633 -100823679 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 733 507 259 74 0 chr13 19460795 19460930 -100823382 - RSINE1 SINE B4 -17 148 4 4 733 1029 269 52 7 chr13 19463761 19464049 -100820263 + MTEa LTR MaLR 33 333 -46 4 733 234 0 0 0 chr13 19465146 19465172 -100819140 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 733 432 0 0 0 chr13 19465172 19465220 -100819092 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 733 251 250 24 32 chr13 19467301 19467425 -100816887 + Charlie5 DNA MER1_type 2501 2623 -1 4 733 1151 158 66 0 chr13 19467600 19467796 -100816516 - B3 SINE B2 -7 209 1 4 733 189 74 0 0 chr13 19467839 19467866 -100816446 + (A)n Simple_repeat Simple_repeat 1 27 0 4 733 38 51 0 0 chr13 19468673 19468732 -100815580 + AT_rich Low_complexity Low_complexity 1 59 0 4 733 21 36 0 0 chr13 19469633 19469661 -100814651 + AT_rich Low_complexity Low_complexity 1 28 0 4 733 183 42 0 0 chr13 19470183 19470207 -100814105 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 733 725 85 0 9 chr13 19471007 19471114 -100813198 + (GGAA)n Simple_repeat Simple_repeat 3 108 0 4 733 3097 181 70 35 chr13 19471768 19472474 -100811838 + Lx9 LINE L1 6899 7632 -12 4 733 270 0 0 0 chr13 19472474 19472504 -100811808 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 733 3097 181 70 35 chr13 19472504 19472516 -100811796 + Lx9 LINE L1 7633 7642 -2 4 733 398 341 106 20 chr13 19472512 19472862 -100811450 + L1M5 LINE L1 4656 5035 -1111 4 733 321 26 0 0 chr13 19473826 19473864 -100810448 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 733 204 67 0 0 chr13 19473865 19473895 -100810417 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 733 195 69 0 0 chr13 19473916 19473945 -100810367 + (TC)n Simple_repeat Simple_repeat 1 29 0 5 733 225 186 0 0 chr13 19473947 19473990 -100810322 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 733 1812 106 14 114 chr13 19474355 19474707 -100809605 + ORR1A4 LTR MaLR 5 321 -8 5 733 1615 299 42 42 chr13 19474751 19475373 -100808939 + Lx8 LINE L1 6313 6934 -539 5 733 554 267 33 38 chr13 19475417 19475600 -100808712 - B3A SINE B2 -16 182 1 5 733 1685 222 22 27 chr13 19475609 19476016 -100808296 - MTD LTR MaLR -14 405 1 5 733 572 309 71 39 chr13 19476016 19476326 -100807986 + Lx7 LINE L1 6919 7238 -458 5 733 22 0 0 0 chr13 19476934 19476956 -100807356 + AT_rich Low_complexity Low_complexity 1 22 0 5 733 236 250 0 32 chr13 19477174 19477236 -100807076 + CT-rich Low_complexity Low_complexity 2 61 0 5 733 241 266 24 96 chr13 19477239 19477364 -100806948 - PB1D10 SINE Alu -1 116 1 5 733 716 264 19 9 chr13 19478207 19478417 -100805895 - L1MB5 LINE L1 0 6174 5963 5 733 835 221 126 28 chr13 19478533 19478650 -100805662 - MTD LTR MaLR -14 405 280 5 733 540 0 0 0 chr13 19478650 19478710 -100805602 + (CAG)n Simple_repeat Simple_repeat 2 61 0 5 733 835 236 121 43 chr13 19478710 19478971 -100805341 - MTD LTR MaLR -140 279 6 5 733 777 211 74 9 chr13 19479054 19479269 -100805043 + Lx9 LINE L1 7396 7624 -20 5 733 4172 134 53 31 chr13 19479281 19480019 -100804293 + RMER6A LTR ERVK 3 756 0 5 733 297 0 0 0 chr13 19480073 19480106 -100804206 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 733 510 17 0 0 chr13 19480111 19480170 -100804142 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 733 228 250 0 0 chr13 19480364 19480424 -100803888 + A-rich Low_complexity Low_complexity 1 60 0 5 733 778 194 21 0 chr13 19480535 19480679 -100803633 + B1_Mur2 SINE Alu 2 148 -1 5 733 23 0 0 0 chr13 19480713 19480736 -100803576 + AT_rich Low_complexity Low_complexity 1 23 0 5 733 220 345 56 33 chr13 19481034 19481124 -100803188 - MIRm SINE MIR -15 261 170 5 733 231 61 0 0 chr13 19481662 19481695 -100802617 + (T)n Simple_repeat Simple_repeat 1 33 0 5 733 1133 62 7 7 chr13 19481695 19481842 -100802470 - B1_Mus2 SINE Alu 0 147 1 5 733 193 239 176 40 chr13 19482482 19482556 -100801756 + MIR SINE MIR 88 171 -91 5 733 279 182 121 0 chr13 19482679 19482745 -100801567 + MER20 DNA MER1_type 140 213 -6 5 733 346 284 74 111 chr13 19482926 19483116 -100801196 + B3A SINE B2 1 183 -15 5 733 184 317 195 20 chr13 19486317 19486568 -100797744 + L2a LINE L2 3114 3408 -18 5 733 198 0 0 0 chr13 19487160 19487182 -100797130 + (A)n Simple_repeat Simple_repeat 1 22 0 5 733 365 310 129 55 chr13 19489011 19489112 -100795200 - L1ME3A LINE L1 -195 5978 5872 5 733 849 282 98 14 chr13 19489112 19489458 -100794854 + MTE2b LTR MaLR 1 375 -4 5 733 365 310 129 55 chr13 19489458 19490031 -100794281 - L1ME3A LINE L1 -302 5871 5254 5 733 952 203 72 18 chr13 19491178 19491399 -100792913 + RLTR42-int LTR ERVK 1105 1337 -4185 5 733 1124 109 6 0 chr13 19491417 19491582 -100792730 + B2_Mm2 SINE B2 1 166 -29 5 733 225 0 0 0 chr13 19491582 19491607 -100792705 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 733 345 161 35 0 chr13 19491606 19491693 -100792619 + (TA)n Simple_repeat Simple_repeat 1 90 0 5 733 358 164 13 27 chr13 19491881 19491956 -100792356 + RLTR19-int LTR ERVK 900 973 -5164 5 733 277 163 419 0 chr13 19492112 19492198 -100792114 + RLTR19-int LTR ERVK 1737 1858 -3664 5 733 460 148 8 85 chr13 19492227 19492345 -100791967 + RLTR19-int LTR ERVK 1058 1166 -4971 5 733 1424 285 65 43 chr13 19492350 19492981 -100791331 + ORR1A1-int LTR MaLR 469 1226 -32 5 733 2976 35 9 0 chr13 19493015 19493358 -100790954 + ORR1A1 LTR MaLR 1 346 0 5 733 1915 238 80 124 chr13 19493518 19494956 -100789356 + RLTR19-int LTR ERVK 2183 3690 -2447 5 733 3953 69 39 7 chr13 19494956 19495498 -100788814 + Lx3_Mus LINE L1 6450 7008 -1 5 733 1843 222 58 116 chr13 19495498 19495698 -100788614 + RLTR19-int LTR ERVK 3691 3881 -2256 5 733 378 0 0 0 chr13 19495698 19495740 -100788572 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 733 1843 222 58 116 chr13 19495740 19495910 -100788402 + RLTR19-int LTR ERVK 3882 4029 -2108 5 733 870 282 32 85 chr13 19495952 19496328 -100787984 + RLTR19-int LTR ERVK 4023 4378 -1759 5 733 2571 108 19 3 chr13 19498162 19498541 -100785771 + L1_Mus3 LINE L1 6248 6632 -6 5 733 1232 48 0 0 chr13 19498586 19498733 -100785579 + B1_Mm SINE Alu 1 147 0 5 733 1172 194 100 18 chr13 19498762 19499041 -100785271 + ORR1B2 LTR MaLR 13 314 -53 5 733 1386 259 33 76 chr13 19499060 19499520 -100784792 - RMER15 LTR ERVL -109 466 27 5 733 1330 284 43 35 chr13 19500512 19501005 -100783307 - RMER5 LTR ERV1 0 534 38 1 733 535 259 23 107 chr13 19501311 19501488 -100782824 + RSINE1 SINE B4 4 165 0 2 733 352 269 30 60 chr13 19502156 19502322 -100781990 + L1M4 LINE L1 4899 5059 -1087 3 733 870 95 0 0 chr13 19503303 19503429 -100780883 + (GGAA)n Simple_repeat Simple_repeat 3 128 0 4 733 258 32 0 0 chr13 19504535 19504566 -100779746 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 733 398 227 58 0 chr13 19505717 19505862 -100778450 - L1M2 LINE L1 -831 5315 5159 6 733 582 364 47 21 chr13 19506177 19506601 -100777711 - L1M2 LINE L1 -1314 4829 4395 6 733 480 347 26 26 chr13 19506615 19506769 -100777543 - RSINE1 SINE B4 -10 155 2 7 733 333 304 0 0 chr13 19506787 19506866 -100777446 - ID4_ SINE ID -3 80 2 8 733 423 278 125 26 chr13 19506980 19507283 -100777029 - L1M2 LINE L1 -2473 3667 3335 6 733 723 209 33 55 chr13 19507289 19507471 -100776841 - B3 SINE B2 -4 212 35 9 733 517 269 133 20 chr13 19507545 19508034 -100776278 - L1M2 LINE L1 -2800 3340 2797 6 733 1905 193 68 33 chr13 19508041 19508438 -100775874 - MTD LTR MaLR -8 411 1 1 733 479 290 52 9 chr13 19508451 19508711 -100775601 - L1M2 LINE L1 -3355 2785 2513 6 733 231 170 0 0 chr13 19509694 19509741 -100774571 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 1 733 2742 78 39 0 chr13 19510137 19510522 -100773790 + BGLII LTR ERVK 1 400 -21 1 733 9360 92 6 1 chr13 19511296 19513508 -100770804 + L1_Mus3 LINE L1 4407 6631 -7 1 733 468 0 0 0 chr13 19513710 19513762 -100770550 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 733 416 296 39 90 chr13 19513762 19513918 -100770394 - B3A SINE B2 -50 148 1 1 733 366 369 114 18 chr13 19514358 19514700 -100769612 - L1M5 LINE L1 -1247 4899 4525 1 733 272 227 61 10 chr13 19514831 19514929 -100769383 - L1M4 LINE L1 -997 5149 5047 1 733 287 114 0 22 chr13 19515070 19515115 -100769197 + B3A SINE B2 5 48 -150 1 733 892 270 76 64 chr13 19515420 19516106 -100768206 - L1MD1 LINE L1 -379 5863 5188 1 733 486 296 56 51 chr13 19516141 19516337 -100767975 - MTD LTR MaLR 0 419 223 2 733 801 223 0 0 chr13 19516345 19516484 -100767828 - B1_Mur1 SINE Alu -6 143 5 2 733 541 244 54 159 chr13 19516465 19516553 -100767759 - MTD LTR MaLR -188 231 151 2 733 2304 105 60 22 chr13 19516553 19516922 -100767390 + RLTR9A2 LTR ERVK 1 383 0 2 733 541 244 54 159 chr13 19516922 19516967 -100767345 - MTD LTR MaLR -269 150 106 2 733 988 240 14 0 chr13 19516967 19517175 -100767137 + B3 SINE B2 1 211 -5 2 733 541 244 54 159 chr13 19517175 19517279 -100767033 - MTD LTR MaLR -314 105 18 2 733 255 283 16 40 chr13 19517311 19517436 -100766876 - L1MD1 LINE L1 -1060 5086 4965 1 733 411 106 0 0 chr13 19517556 19517622 -100766690 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 733 429 143 16 16 chr13 19517902 19518030 -100766282 + A-rich Low_complexity Low_complexity 2 129 0 2 733 4148 47 12 2 chr13 19518296 19518803 -100765509 - RLTR1B LTR ERV1 0 512 1 2 733 656 286 58 0 chr13 19519130 19519371 -100764941 - Lx7 LINE L1 -666 7030 6776 2 733 192 40 0 0 chr13 19519384 19519409 -100764903 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2 733 666 168 40 59 chr13 19519413 19519565 -100764747 - B2_Mm2 SINE B2 -44 151 3 2 733 366 297 17 17 chr13 19519591 19519711 -100764601 + Lx7 LINE L1 7038 7157 -539 3 733 26 88 0 0 chr13 19520780 19520848 -100763464 + AT_rich Low_complexity Low_complexity 1 68 0 3 733 473 29 0 14 chr13 19520848 19520918 -100763394 - L1_Mus4 LINE L1 -7 6629 6561 3 733 278 315 67 11 chr13 19521030 19521120 -100763192 + B1F SINE Alu 9 103 -46 3 733 1348 153 5 0 chr13 19521517 19521739 -100762573 - Lx2 LINE L1 0 6997 6775 3 733 968 108 7 0 chr13 19521739 19521887 -100762425 - Lx2 LINE L1 -354 6643 6495 3 733 6700 117 12 10 chr13 19523253 19524259 -100760053 - Lx2 LINE L1 -4 6993 5986 3 733 393 102 0 0 chr13 19524260 19524319 -100759993 - Lx3C LINE L1 -1120 5856 5798 3 733 846 191 27 121 chr13 19526717 19526989 -100757323 + ORR1B1 LTR MaLR 1 258 -112 3 733 884 83 0 8 chr13 19527505 19527627 -100756685 + ORR1B1 LTR MaLR 272 392 -2 3 733 656 56 0 11 chr13 19528384 19528474 -100755838 + (TTTC)n Simple_repeat Simple_repeat 4 92 0 3 733 815 29 0 10 chr13 19528556 19528659 -100755653 + (GAAA)n Simple_repeat Simple_repeat 3 104 0 3 733 1245 14 0 0 chr13 19529189 19529332 -100754980 + (GGGAGA)n Simple_repeat Simple_repeat 3 145 0 4 733 401 0 0 20 chr13 19529556 19529606 -100754706 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 734 232 280 87 113 chr13 19530405 19530590 -100753722 + MT2A LTR ERVL 1 180 -353 4 734 613 292 60 0 chr13 19530433 19530601 -100753711 + MTD LTR MaLR 42 219 -200 4 734 33712 49 0 22 chr13 19530607 19535632 -100748680 + L1Md_T LINE L1 1 4879 -1007 4 734 4026 11 0 0 chr13 19535632 19536082 -100748230 - L1Md_T LINE L1 0 6582 6133 4 734 33712 38 0 17 chr13 19536082 19536807 -100747505 + L1Md_T LINE L1 4880 5588 -298 4 734 8440 31 1 0 chr13 19536808 19537803 -100746509 + L1Md_T LINE L1 5590 6585 0 4 734 22 0 0 0 chr13 19537803 19537825 -100746487 + AT_rich Low_complexity Low_complexity 1 22 0 4 734 233 250 19 0 chr13 19537932 19537984 -100746328 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 4 734 180 0 0 0 chr13 19538019 19538039 -100746273 + (A)n Simple_repeat Simple_repeat 1 20 0 4 734 845 196 98 5 chr13 19538039 19538244 -100746068 + MTD LTR MaLR 196 419 0 4 734 1010 83 7 40 chr13 19538563 19538714 -100745598 - B1_Mus2 SINE Alu 0 147 2 4 734 863 147 14 14 chr13 19538918 19539063 -100745249 - B1_Mur3 SINE Alu -2 147 3 5 734 313 248 18 0 chr13 19540419 19540510 -100743802 + B1_Mur2 SINE Alu 49 144 -5 5 734 189 0 0 0 chr13 19540510 19540531 -100743781 + (GA)n Simple_repeat Simple_repeat 1 21 0 5 734 882 29 0 0 chr13 19540531 19540636 -100743676 + (GAA)n Simple_repeat Simple_repeat 3 107 0 5 734 967 263 243 3 chr13 19542141 19542454 -100741858 - MTB_Mm LTR MaLR 0 407 20 5 734 396 0 0 0 chr13 19542454 19542498 -100741814 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 5 734 256 315 130 0 chr13 19542501 19542593 -100741719 - B3 SINE B2 -6 210 107 5 734 237 232 24 24 chr13 19542683 19542767 -100741545 + L1M4 LINE L1 5211 5294 -852 5 734 560 239 144 49 chr13 19542891 19543155 -100741157 - B4A SINE B4 -2 290 2 5 734 354 341 121 5 chr13 19543160 19543384 -100740928 - MLT1A0 LTR MaLR -42 323 74 5 734 1106 305 89 46 chr13 19543413 19543974 -100740338 - Lx8 LINE L1 -8 7465 6881 6 734 369 319 36 5 chr13 19544057 19544249 -100740063 + L1M4 LINE L1 5319 5516 -658 5 734 22 0 0 0 chr13 19544404 19544426 -100739886 + AT_rich Low_complexity Low_complexity 1 22 0 6 734 251 288 59 16 chr13 19547213 19547400 -100736912 - L1MB3 LINE L1 -28 6155 5961 6 734 222 62 0 0 chr13 19547449 19547481 -100736831 + (T)n Simple_repeat Simple_repeat 1 32 0 6 734 885 82 96 7 chr13 19547481 19547616 -100736696 - B1_Mus1 SINE Alu 0 148 2 6 734 352 314 145 56 chr13 19547802 19548140 -100736172 - L1MB3 LINE L1 -315 5868 5501 6 734 489 288 163 29 chr13 19548235 19549019 -100735293 - L1M4 LINE L1 -923 5223 4335 6 734 1251 264 27 18 chr13 19549019 19549347 -100734965 + ORR1E LTR MaLR 1 331 -28 6 734 377 367 60 13 chr13 19549370 19549402 -100734910 - RSINE1 SINE B4 -4 161 127 6 734 306 0 0 0 chr13 19549402 19549436 -100734876 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 734 377 367 60 13 chr13 19549436 19549552 -100734760 - RSINE1 SINE B4 -39 126 8 6 734 368 252 69 4 chr13 19549553 19549698 -100734614 - L1M4 LINE L1 -3318 2828 2676 6 734 755 284 46 8 chr13 19549914 19550276 -100734036 - L1MB3 LINE L1 -1224 4916 4512 6 734 243 0 0 0 chr13 19550285 19550312 -100734000 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 6 734 5627 98 7 35 chr13 19550312 19551174 -100733138 - Lx3A LINE L1 -14 6967 6130 7 734 22 0 0 0 chr13 19551656 19551678 -100732634 + AT_rich Low_complexity Low_complexity 1 22 0 7 734 648 275 160 48 chr13 19551853 19552166 -100732146 + RLTR9A LTR ERVK 13 360 -8 7 734 423 0 0 0 chr13 19554088 19554135 -100730177 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 734 350 257 18 18 chr13 19554363 19554389 -100729923 - BC1_Mm scRNA scRNA -41 111 1 7 734 451 214 0 12 chr13 19554389 19554474 -100729838 - B4 SINE B4 -208 84 1 7 734 245 292 18 0 chr13 19554649 19554762 -100729550 - L1ME2z LINE L1 -22 6422 6308 7 734 203 247 14 0 chr13 19554866 19554939 -100729373 + (TA)n Simple_repeat Simple_repeat 1 74 0 7 734 809 256 33 0 chr13 19554964 19555144 -100729168 - B3A SINE B2 -12 186 1 7 734 668 280 43 24 chr13 19555185 19555514 -100728798 - L1ME2z LINE L1 -370 6074 5740 7 734 4120 31 0 0 chr13 19556363 19556843 -100727469 - L1Md_A LINE L1 -2 6580 6101 7 734 2873 108 29 50 chr13 19556897 19557373 -100726939 + Lx4A LINE L1 6591 7056 -2 8 734 29 0 0 0 chr13 19557380 19557409 -100726903 + AT_rich Low_complexity Low_complexity 1 29 0 8 734 648 0 0 0 chr13 19559250 19559322 -100724990 + (GGAGA)n Simple_repeat Simple_repeat 2 73 0 8 734 864 248 30 5 chr13 19559830 19560033 -100724279 + B3 SINE B2 3 210 -6 8 734 229 135 39 0 chr13 19560037 19560089 -100724223 + GA-rich Low_complexity Low_complexity 2 55 0 8 734 917 166 19 6 chr13 19560685 19560843 -100723469 - URR1B DNA MER1_type -65 160 1 8 734 3044 17 0 17 chr13 19562009 19562361 -100721951 + ORR1A0 LTR MaLR 1 346 0 8 734 211 216 0 0 chr13 19562467 19562518 -100721794 + T-rich Low_complexity Low_complexity 1 51 0 8 734 428 274 103 27 chr13 19562741 19562925 -100721387 + MIRb SINE MIR 55 252 -16 8 734 185 86 57 0 chr13 19562950 19562985 -100721327 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 8 734 246 286 115 9 chr13 19563202 19563315 -100720997 + PB1 SINE Alu 1 125 -2 9 734 5212 64 9 9 chr13 19563709 19564400 -100719912 + Lx3_Mus LINE L1 6319 7009 0 9 734 2710 230 41 22 chr13 19564551 19565227 -100719085 - Lx6 LINE L1 0 7460 6772 9 734 306 297 40 0 chr13 19565263 19565364 -100718948 + PB1D7 SINE Alu 1 105 -15 9 734 894 181 209 0 chr13 19565644 19565821 -100718491 + B3 SINE B2 2 215 -1 9 734 1990 194 92 62 chr13 19566465 19566681 -100717631 + L1_Rod LINE L1 740 952 -6656 9 734 216 0 0 0 chr13 19566681 19566705 -100717607 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 9 734 1990 203 77 49 chr13 19566705 19567270 -100717042 + L1_Rod LINE L1 953 1546 -4301 9 734 794 28 0 0 chr13 19567355 19567463 -100716849 + L1Md_T LINE L1 6475 6582 0 9 734 607 196 171 12 chr13 19567835 19568005 -100716307 + RMER15 LTR ERVL 22 218 -357 9 734 4138 99 124 3 chr13 19568005 19568399 -100715913 - Lx3_Mus LINE L1 -637 6372 5923 9 734 446 0 19 0 chr13 19568399 19568453 -100715859 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 734 5681 74 48 23 chr13 19568453 19569340 -100714972 - Lx3_Mus LINE L1 -1087 5922 5004 9 734 302 271 121 0 chr13 19569571 19569711 -100714601 - Lx8 LINE L1 -7 7466 7310 1 734 232 48 0 45 chr13 19569832 19569876 -100714436 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 1 734 1113 36 7 0 chr13 19569876 19570014 -100714298 - B1_Mm SINE Alu 0 147 9 1 734 389 273 0 98 chr13 19569910 19570032 -100714280 - MT2B LTR ERVL -337 264 155 1 734 355 239 23 0 chr13 19570043 19570131 -100714181 - Lx8 LINE L1 -334 7139 7050 1 734 1202 231 65 29 chr13 19570139 19570532 -100713780 + MT2A LTR ERVL 1 537 -64 1 734 980 300 84 0 chr13 19570541 19570921 -100713391 + Lx8 LINE L1 6647 7058 -415 1 734 1108 241 113 3 chr13 19570933 19570953 -100713359 - RMER15 LTR ERVL -14 561 535 1 734 183 42 0 0 chr13 19570953 19570977 -100713335 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 734 1108 241 113 3 chr13 19570977 19571239 -100713073 - RMER15 LTR ERVL -41 534 249 1 734 697 119 39 19 chr13 19571239 19571393 -100712919 + Lx3_Mus LINE L1 6853 7009 0 1 734 400 296 99 52 chr13 19571451 19571798 -100712514 + Lx9 LINE L1 6060 6564 -1080 1 734 430 227 36 9 chr13 19571802 19571913 -100712399 + L1_Rod LINE L1 5061 5174 -673 1 734 331 143 57 0 chr13 19571928 19571998 -100712314 + Lx9 LINE L1 7332 7405 -239 1 734 324 0 0 0 chr13 19571998 19572034 -100712278 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 734 334 170 198 0 chr13 19572034 19572140 -100712172 + Lx9 LINE L1 7517 7643 -1 1 734 2032 148 57 3 chr13 19572332 19572683 -100711629 + Lx4A LINE L1 6689 7058 0 1 734 525 119 0 29 chr13 19573853 19573957 -100710355 + (GA)n Simple_repeat Simple_repeat 2 102 0 1 734 559 291 71 25 chr13 19577513 19577753 -100706559 - MER2 DNA MER2_type -15 330 80 1 734 395 293 128 42 chr13 19577813 19578101 -100706211 - L1MC5 LINE L1 -214 7747 7435 1 734 33038 69 5 3 chr13 19578462 19584659 -100699653 - L1Md_F2 LINE L1 0 6582 374 1 734 25 31 0 0 chr13 19584810 19584842 -100699470 + AT_rich Low_complexity Low_complexity 1 32 0 1 734 426 39 0 0 chr13 19584870 19584922 -100699390 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1 734 461 227 0 0 chr13 19585917 19586014 -100698298 + B1_Mur2 SINE Alu 40 136 -13 1 734 387 0 0 0 chr13 19586022 19586065 -100698247 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 734 1984 196 39 70 chr13 19586138 19586627 -100697685 + RMER19C LTR ERVK 138 611 0 1 734 29 90 0 0 chr13 19586627 19586705 -100697607 + AT_rich Low_complexity Low_complexity 1 78 0 1 734 7689 41 2 8 chr13 19586982 19587974 -100696338 - L1Md_F2 LINE L1 0 6582 5597 1 734 1102 43 42 7 chr13 19588281 19588423 -100695889 - B1_Mus2 SINE Alu 0 147 1 1 734 204 125 0 0 chr13 19589357 19589389 -100694923 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 1 734 342 236 5 60 chr13 19589391 19589549 -100694763 + L1M2 LINE L1 5501 5648 -643 1 734 293 206 21 32 chr13 19590582 19590677 -100693635 - L1MA9 LINE L1 -40 6272 6179 1 734 450 0 0 0 chr13 19590710 19590760 -100693552 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 734 1377 312 99 43 chr13 19591086 19591880 -100692432 + Lx8 LINE L1 6260 7098 -375 1 734 1395 264 27 14 chr13 19592396 19592761 -100691551 - ORR1D2 LTR MaLR 0 370 1 1 734 301 283 151 41 chr13 19592776 19593067 -100691245 - L1MA9 LINE L1 -251 6040 5718 1 734 477 76 0 0 chr13 19593686 19593752 -100690560 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 734 227 348 72 0 chr13 19593802 19593871 -100690441 - RSINE1 SINE B4 -91 74 1 1 734 950 251 95 48 chr13 19594779 19595291 -100689021 - RMER4B LTR ERVK 0 585 22 1 734 189 0 0 0 chr13 19595334 19595355 -100688957 + (A)n Simple_repeat Simple_repeat 1 21 0 1 734 1631 222 114 2 chr13 19596055 19596483 -100687829 - Lx8 LINE L1 -770 6703 6228 1 734 328 303 69 43 chr13 19596594 19596870 -100687442 + L1M2 LINE L1 4936 5218 -925 1 734 507 186 29 10 chr13 19597206 19597309 -100687003 - B1_Mur1 SINE Alu 0 149 45 1 734 363 243 43 70 chr13 19598128 19598243 -100686069 + MT2A LTR ERVL 322 433 -100 1 734 274 40 80 0 chr13 19598247 19598297 -100686015 + (TCTCTG)n Simple_repeat Simple_repeat 1 54 0 1 734 876 270 103 35 chr13 19598379 19598747 -100685565 - RMER5 LTR ERV1 -10 524 132 1 734 237 247 0 13 chr13 19599955 19600033 -100684279 - L1Md_F LINE L1 -6384 135 59 1 734 8460 31 0 0 chr13 19600033 19601021 -100683291 + L1Md_T LINE L1 5593 6580 -2 1 734 407 215 17 93 chr13 19601043 19601061 -100683251 + MT2B LTR ERVL 150 158 -443 1 734 765 171 32 0 chr13 19601061 19601184 -100683128 + B1_Mus1 SINE Alu 1 127 -21 1 734 557 284 8 0 chr13 19601275 19601409 -100682903 + MTC LTR MaLR 80 214 -207 1 734 396 390 62 45 chr13 19601557 19601820 -100682492 - LTR16A LTR ERVL -126 325 55 1 734 7321 31 8 0 chr13 19601820 19602692 -100681620 + L1Md_F3 LINE L1 5692 6570 -14 1 734 396 390 62 45 chr13 19602692 19602718 -100681594 - LTR16A LTR ERVL -397 54 31 1 734 758 41 0 0 chr13 19602718 19602815 -100681497 + L1_Mm LINE L1 4453 4549 -1334 1 734 501 297 59 52 chr13 19603241 19603511 -100680801 - HERV16-int LTR ERVL -3811 1185 914 1 734 329 246 96 24 chr13 19604010 19604135 -100680177 - L1M4 LINE L1 -2543 3603 3470 1 734 255 269 211 34 chr13 19604681 19604889 -100679423 + L1MCa LINE L1 74 318 -6190 1 734 295 192 123 37 chr13 19604975 19605056 -100679256 + RLTR25B LTR ERVK 422 509 -519 1 734 710 62 0 20 chr13 19604992 19605091 -100679221 + B1_Mus2 SINE Alu 43 139 -8 1 734 297 51 0 0 chr13 19605091 19605130 -100679182 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 734 243 0 0 0 chr13 19605452 19605479 -100678833 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 734 563 282 22 51 chr13 19605686 19605713 -100678599 + RSINE1 SINE B4 4 32 -133 1 734 2025 218 33 162 chr13 19605713 19606370 -100677942 + RMER19C LTR ERVK 1 570 -41 1 734 929 166 86 0 chr13 19606370 19606545 -100677767 - B2_Mm2 SINE B2 -4 191 2 1 734 2025 218 33 162 chr13 19606545 19606589 -100677723 + RMER19C LTR ERVK 571 611 0 1 734 563 282 22 51 chr13 19606589 19606699 -100677613 + RSINE1 SINE B4 33 137 -28 1 734 504 0 0 0 chr13 19606707 19606763 -100677549 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 734 870 262 9 9 chr13 19606804 19607020 -100677292 + B3 SINE B2 1 216 0 1 734 227 315 96 0 chr13 19608694 19608767 -100675545 + MIRb SINE MIR 119 198 -70 1 734 3408 38 0 0 chr13 19609382 19609778 -100674534 - MTA_Mm LTR MaLR 0 396 1 1 734 807 66 0 0 chr13 19610092 19610198 -100674114 + (GA)n Simple_repeat Simple_repeat 1 106 0 1 734 549 110 0 0 chr13 19611383 19611474 -100672838 + (TA)n Simple_repeat Simple_repeat 2 92 0 1 734 189 107 0 0 chr13 19612263 19612291 -100672021 + (T)n Simple_repeat Simple_repeat 1 28 0 1 734 3219 93 27 0 chr13 19612295 19612737 -100671575 - L1_Mus1 LINE L1 0 6567 6114 1 734 1486 91 32 0 chr13 19612737 19612958 -100671354 + L1Md_F2 LINE L1 5899 6126 -456 1 734 298 221 88 55 chr13 19612964 19613055 -100671257 + RSINE1 SINE B4 65 158 -7 1 734 944 228 118 26 chr13 19613309 19613675 -100670637 + MTD LTR MaLR 1 421 0 1 734 269 262 28 28 chr13 19614719 19614825 -100669487 + L1MC LINE L1 4588 4693 -1453 1 734 1166 68 0 0 chr13 19615123 19615270 -100669042 + B1_Mus2 SINE Alu 1 147 0 1 734 199 0 65 0 chr13 19616128 19616159 -100668153 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 1 734 188 342 13 0 chr13 19617001 19617080 -100667232 - L2 LINE L2 -793 2626 2547 1 734 2548 188 88 30 chr13 19619404 19620245 -100664067 + Lx4B LINE L1 5380 6233 -825 1 734 633 184 164 13 chr13 19620241 19620474 -100663838 + Lx4B LINE L1 6624 6930 -46 1 734 1628 176 172 3 chr13 19621606 19621943 -100662369 - ORR1B1 LTR MaLR 0 394 1 1 734 1094 282 69 67 chr13 19623136 19623627 -100660685 - RMER13A LTR ERVK -367 493 2 1 734 21 0 0 0 chr13 19624003 19624024 -100660288 + AT_rich Low_complexity Low_complexity 1 21 0 1 734 3052 200 69 188 chr13 19624025 19625182 -100659130 - RMER1B Other Other -46 1020 1 1 734 1024 105 65 7 chr13 19625661 19625815 -100658497 + B2_Mm2 SINE B2 1 163 -32 1 734 5281 51 1 0 chr13 19625815 19626504 -100657808 + L1Md_F2 LINE L1 4897 5586 -297 1 734 8143 48 0 3 chr13 19626504 19627503 -100656809 + L1Md_F2 LINE L1 5587 6582 0 1 734 378 0 0 0 chr13 19627541 19627583 -100656729 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 734 181 281 110 0 chr13 19628138 19628220 -100656092 + L2 LINE L2 2811 2901 -518 1 734 23717 141 18 5 chr13 19628617 19634256 -100650056 + L1_Mus4 LINE L1 910 6625 -11 1 734 303 261 43 138 chr13 19634513 19634766 -100649546 - L1MA6 LINE L1 -287 6004 5776 1 734 1676 57 0 0 chr13 19634996 19635207 -100649105 - L1Md_T LINE L1 0 6582 6372 1 734 22 56 0 0 chr13 19635249 19635285 -100649027 + AT_rich Low_complexity Low_complexity 1 36 0 1 734 3461 141 24 0 chr13 19635358 19635898 -100648414 - Lx4A LINE L1 -5 7053 6501 1 734 731 281 18 0 chr13 19635898 19636119 -100648193 - Lx7 LINE L1 -589 7107 6883 1 734 10600 160 19 186 chr13 19636119 19641979 -100642333 - Lx2A1 LINE L1 0 7008 2202 1 734 7556 167 78 21 chr13 19641977 19642537 -100641775 - L1_Mur2 LINE L1 -2711 3166 2549 1 734 7484 119 23 2 chr13 19642537 19643670 -100640642 - Lx2 LINE L1 0 6997 5841 1 734 7556 167 78 21 chr13 19643670 19643849 -100640463 - L1_Mur2 LINE L1 -3329 2548 2375 1 734 3483 20 2 0 chr13 19643849 19644244 -100640068 + MTA_Mm LTR MaLR 1 396 0 1 734 7556 167 132 25 chr13 19644244 19645532 -100638780 - L1_Mur2 LINE L1 -3503 2374 958 1 734 880 243 228 63 chr13 19645535 19646008 -100638304 + RLTR20C LTR ERVK 1 551 0 1 734 273 208 0 40 chr13 19646008 19646083 -100638229 - L1_Mur2 LINE L1 -6126 960 889 1 734 217 239 45 0 chr13 19646820 19646908 -100637404 + (TA)n Simple_repeat Simple_repeat 1 92 0 1 734 469 368 72 112 chr13 19648678 19649161 -100635151 - MLT1G3 LTR MaLR -12 583 120 1 734 478 361 87 35 chr13 19649543 19649830 -100634482 + MTEa LTR MaLR 1 302 -77 1 734 314 268 194 83 chr13 19649865 19650081 -100634231 + Tigger6a DNA MER2_type 192 431 -652 1 734 309 272 11 56 chr13 19650125 19650250 -100634062 + MLT2B1 LTR ERVL 71 183 -337 2 734 667 283 145 17 chr13 19650419 19650771 -100633541 + Tigger6a DNA MER2_type 420 816 -267 1 734 1337 262 155 10 chr13 19650793 19651015 -100633297 - Lx8 LINE L1 -3 7470 7207 2 734 441 0 0 0 chr13 19651015 19651064 -100633248 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 734 405 0 0 0 chr13 19651064 19651108 -100633204 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 734 1337 262 155 10 chr13 19651108 19651490 -100632822 - Lx8 LINE L1 -267 7206 6778 2 734 356 267 20 0 chr13 19651553 19651654 -100632658 + Tigger6a DNA MER2_type 885 987 -96 1 734 644 114 0 8 chr13 19653251 19653383 -100630929 + (TC)n Simple_repeat Simple_repeat 2 132 0 2 734 243 274 0 0 chr13 19653410 19653461 -100630851 - ID4 SINE ID -29 54 4 2 734 216 163 0 0 chr13 19654359 19654402 -100629910 + (CCA)n Simple_repeat Simple_repeat 1 43 0 2 734 2098 94 9 51 chr13 19655196 19655532 -100628780 + RLTRETN_Mm LTR ERVK 1 322 0 2 734 228 35 0 0 chr13 19655688 19655717 -100628595 + (CAA)n Simple_repeat Simple_repeat 3 31 0 2 734 224 359 34 40 chr13 19655925 19656102 -100628210 + L2a LINE L2 2001 2176 -1243 2 734 1877 99 3 0 chr13 19656197 19656481 -100627831 - L1_Mur1 LINE L1 -875 5011 4727 2 734 4416 177 55 59 chr13 19656474 19658264 -100626048 - L1VL4 LINE L1 -3994 1889 220 2 734 403 55 0 0 chr13 19658265 19658320 -100625992 - L1_Mur1 LINE L1 -1946 3940 3886 2 734 9413 78 511 10 chr13 19658318 19658630 -100625682 + Lx3_Mus LINE L1 4994 5609 -277 2 734 3276 43 5 0 chr13 19658630 19659024 -100625288 + MTA_Mm LTR MaLR 1 396 0 2 734 9413 87 10 28 chr13 19659024 19660444 -100623868 + Lx3_Mus LINE L1 5607 7002 -7 2 734 300 357 42 20 chr13 19660450 19660585 -100623727 - MER45C DNA Tip100 -814 139 1 2 735 188 279 110 59 chr13 19661307 19661425 -100622887 + L2a LINE L2 3041 3164 -262 2 735 279 0 0 0 chr13 19661717 19661748 -100622564 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 735 2009 216 147 100 chr13 19661934 19662636 -100621676 + RLTR13D6 LTR ERVK 1 740 -162 2 735 5063 40 2 0 chr13 19662636 19663241 -100621071 - L1Md_F2 LINE L1 -14 6568 5963 2 735 2009 135 28 14 chr13 19663241 19663394 -100620918 + RLTR13D6 LTR ERVK 741 929 0 2 735 2855 66 0 0 chr13 19663394 19663756 -100620556 - L1_Mus1 LINE L1 -11 6556 6195 2 735 240 234 122 23 chr13 19663786 19663917 -100620395 - MER5C DNA MER1_type -74 239 96 2 735 351 0 0 0 chr13 19664091 19664130 -100620182 + (TC)n Simple_repeat Simple_repeat 1 39 0 2 735 441 0 0 0 chr13 19664130 19664178 -100620134 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 735 438 20 0 0 chr13 19664193 19664244 -100620068 + (GGA)n Simple_repeat Simple_repeat 2 52 0 2 735 2822 289 56 12 chr13 19664529 19665487 -100618825 + Lx8 LINE L1 6472 7471 -2 2 735 194 319 41 25 chr13 19665851 19665973 -100618339 - L3 LINE CR1 -819 3670 3547 2 735 222 37 0 0 chr13 19666398 19666425 -100617887 + (T)n Simple_repeat Simple_repeat 1 27 0 2 735 1415 83 27 22 chr13 19666726 19666948 -100617364 + L1Md_F2 LINE L1 6360 6582 0 2 735 678 213 44 7 chr13 19667157 19667294 -100617018 + B1_Mur4 SINE Alu 1 142 -8 2 735 1361 56 0 6 chr13 19667308 19667488 -100616824 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 2 735 563 302 107 60 chr13 19667507 19667824 -100616488 - MLT1B LTR MaLR -56 334 3 2 735 1495 51 0 6 chr13 19670156 19670334 -100613978 - L1_Mus1 LINE L1 -1 6566 6390 2 735 1316 61 0 0 chr13 19670334 19670499 -100613813 + L1_Mus1 LINE L1 5913 6077 -490 2 735 764 72 0 0 chr13 19670727 19670824 -100613488 + L1_Mus1 LINE L1 5981 6077 -490 2 735 2016 170 51 54 chr13 19672383 19672793 -100611519 - MTC LTR MaLR 0 421 13 2 735 200 59 0 29 chr13 19672793 19672828 -100611484 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 735 208 300 98 22 chr13 19673831 19673923 -100610389 + L2 LINE L2 2983 3081 -338 2 735 6067 67 23 10 chr13 19676588 19677433 -100606879 - L1Md_F2 LINE L1 0 6582 5662 2 735 1997 104 15 62 chr13 19677433 19677771 -100606541 + RLTRETN_Mm LTR ERVK 1 322 0 2 735 6067 62 40 21 chr13 19677771 19678279 -100606033 - L1Md_F2 LINE L1 -222 5661 5135 2 735 22133 69 4 0 chr13 19678278 19681127 -100603185 + L1Md_F2 LINE L1 2728 5586 -297 2 735 8075 64 16 2 chr13 19681127 19682108 -100602204 + L1Md_F2 LINE L1 5587 6581 -1 2 735 301 352 86 48 chr13 19683936 19684249 -100600063 - L2b LINE L2 -9 3366 3042 2 735 549 0 0 0 chr13 19685483 19685544 -100598768 + (TTTA)n Simple_repeat Simple_repeat 2 62 0 2 735 916 292 28 12 chr13 19685545 19685867 -100598445 - L1MB3 LINE L1 -291 5892 5566 2 735 197 65 32 0 chr13 19686864 19686895 -100597417 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 735 1157 93 0 0 chr13 19686895 19687034 -100597278 - B1_Mus1 SINE Alu -8 140 2 2 735 21 0 0 0 chr13 19687730 19687751 -100596561 + AT_rich Low_complexity Low_complexity 1 21 0 2 735 755 314 88 8 chr13 19687893 19688156 -100596156 + B4A SINE B4 4 287 -5 2 735 579 109 58 29 chr13 19689315 19689419 -100594893 + L1Md_F2 LINE L1 6468 6574 -8 2 735 223 392 8 24 chr13 19689893 19690016 -100594296 - RSINE1 SINE B4 -40 125 5 2 735 742 120 25 25 chr13 19690785 19690905 -100593407 - PB1D9 SINE Alu 0 120 1 2 735 515 345 39 6 chr13 19691141 19691319 -100592993 - L1MC LINE L1 -2247 5635 5452 2 735 237 288 50 0 chr13 19692820 19692900 -100591412 - L1M3 LINE L1 -2316 3824 3741 2 735 1256 61 0 7 chr13 19694939 19695087 -100589225 + B1_Mm SINE Alu 1 147 0 2 735 554 313 27 7 chr13 19695390 19695538 -100588774 + B4 SINE B4 2 152 -140 2 735 235 347 88 7 chr13 19696714 19696862 -100587450 + L1M5 LINE L1 5507 5666 -458 2 735 3044 73 8 8 chr13 19697067 19697452 -100586860 - L1_Mus1 LINE L1 0 6567 6183 2 735 11036 77 3 2 chr13 19697453 19698924 -100585388 + L1_Mm LINE L1 2675 4147 -1736 2 735 418 39 0 0 chr13 19699063 19699115 -100585197 + L1Md_F2 LINE L1 6517 6568 -14 2 735 281 303 125 33 chr13 19699910 19700094 -100584218 - L2a LINE L2 -41 3385 3185 2 735 211 326 143 39 chr13 19700378 19700560 -100583752 - L2a LINE L2 -685 2734 2534 2 735 211 342 123 42 chr13 19700665 19700949 -100583363 - L2a LINE L2 -962 2457 2151 2 735 545 296 226 8 chr13 19700949 19701184 -100583128 + B4A SINE B4 7 292 0 2 735 486 49 0 0 chr13 19701238 19701299 -100583013 + (CATA)n Simple_repeat Simple_repeat 4 64 0 2 735 216 235 14 14 chr13 19701828 19701897 -100582415 + T-rich Low_complexity Low_complexity 2 70 0 2 735 4092 65 6 0 chr13 19702455 19702948 -100581364 + L1Md_F2 LINE L1 6085 6580 -2 2 735 402 21 0 0 chr13 19703108 19703155 -100581157 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 735 318 295 108 8 chr13 19703189 19703319 -100580993 + L1MC4 LINE L1 6752 6894 -1148 2 735 227 54 27 0 chr13 19703325 19703362 -100580950 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 2 735 309 289 17 9 chr13 19703470 19703585 -100580727 + L1MC4 LINE L1 7240 7355 -687 2 735 302 293 63 63 chr13 19703887 19704029 -100580283 + L1MC4 LINE L1 7761 7902 -140 2 735 1764 118 12 4 chr13 19704141 19704397 -100579915 - L1_Mus3 LINE L1 0 6638 6381 2 735 1955 192 82 13 chr13 19705992 19706382 -100577930 - MTD LTR MaLR -2 417 1 2 735 1261 224 72 107 chr13 19706382 19707359 -100576953 - MTD-int LTR MaLR 0 1258 1 2 735 1587 212 105 11 chr13 19707359 19707722 -100576590 - MTD LTR MaLR 0 419 23 2 735 455 292 149 50 chr13 19707851 19708132 -100576180 + MamRep605 Unknown Unknown 463 771 -105 2 735 257 351 9 0 chr13 19708195 19708309 -100576003 - MIR SINE MIR -38 224 110 2 735 859 295 100 22 chr13 19709601 19709920 -100574392 - MER2 DNA MER2_type -1 344 1 2 735 259 152 47 78 chr13 19710689 19710753 -100573559 + RSINE1 SINE B4 73 134 -31 2 735 384 40 0 0 chr13 19710754 19710804 -100573508 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 735 216 0 0 0 chr13 19711895 19711919 -100572393 + (T)n Simple_repeat Simple_repeat 1 24 0 2 735 321 26 0 0 chr13 19712090 19712128 -100572184 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 735 687 25 0 0 chr13 19712653 19712734 -100571578 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 2 735 216 0 0 0 chr13 19712883 19712907 -100571405 + (TGGA)n Simple_repeat Simple_repeat 3 26 0 2 735 211 167 0 45 chr13 19713459 19713503 -100570809 + (TCTCTG)n Simple_repeat Simple_repeat 2 43 0 2 735 580 74 0 0 chr13 19719830 19719911 -100564401 - L1_Mus2 LINE L1 0 6566 6486 2 735 317 314 65 41 chr13 19720446 19720569 -100563743 - ID_B1 SINE B4 -1 223 98 2 735 294 306 25 67 chr13 19720465 19720584 -100563728 - B1F1 SINE Alu -33 116 3 2 735 800 277 14 19 chr13 19721220 19721430 -100562882 - B3 SINE B2 0 216 8 2 735 384 104 0 0 chr13 19721430 19721497 -100562815 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 735 324 0 0 0 chr13 19721497 19721533 -100562779 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 735 233 270 77 22 chr13 19721536 19721627 -100562685 + L1M5 LINE L1 5617 5712 -412 2 735 1167 99 11 12 chr13 19722846 19723141 -100561171 - RLTR9D LTR ERVK -4 411 1 2 735 461 47 16 0 chr13 19723261 19723325 -100560987 + (CATA)n Simple_repeat Simple_repeat 4 68 0 2 735 203 149 0 41 chr13 19723458 19723507 -100560805 + T-rich Low_complexity Low_complexity 2 48 0 2 735 297 221 235 27 chr13 19723537 19723686 -100560626 + Tigger7 DNA MER2_type 2236 2415 -76 2 735 514 263 36 147 chr13 19725809 19725997 -100558315 + B4 SINE B4 5 157 -67 2 735 628 148 9 0 chr13 19726327 19726435 -100557877 - ORR1A4 LTR MaLR -220 109 1 2 735 450 241 0 0 chr13 19728771 19728854 -100555458 + PB1D10 SINE Alu 29 111 -6 2 735 217 222 0 0 chr13 19728950 19728995 -100555317 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 735 356 312 94 0 chr13 19729016 19729144 -100555168 + B1F SINE Alu 10 149 0 2 735 273 57 0 0 chr13 19729419 19729454 -100554858 + (T)n Simple_repeat Simple_repeat 1 35 0 2 735 477 0 0 0 chr13 19729721 19729774 -100554538 + (TTTA)n Simple_repeat Simple_repeat 3 55 0 2 735 372 43 0 0 chr13 19729774 19729820 -100554492 + (TTA)n Simple_repeat Simple_repeat 1 46 0 2 735 1157 82 0 0 chr13 19729820 19729967 -100554345 - B1_Mm SINE Alu 0 147 1 2 735 300 62 250 0 chr13 19730535 19730583 -100553729 - RLTR8 LTR ERVK -301 64 5 2 735 1158 284 78 56 chr13 19730850 19731313 -100552999 - MTC-int LTR MaLR -531 727 255 2 735 615 312 48 92 chr13 19731642 19731738 -100552574 - MTD LTR MaLR -136 283 195 3 735 3487 128 27 4 chr13 19731738 19732265 -100552047 - Lx4A LINE L1 0 7058 6520 3 735 615 312 48 92 chr13 19732265 19732440 -100551872 - MTD LTR MaLR -225 194 25 3 735 404 262 171 63 chr13 19732820 19732995 -100551317 + B3A SINE B2 5 198 0 3 735 677 264 7 14 chr13 19733006 19733148 -100551164 - B1_Mus2 SINE Alu -1 146 6 3 735 635 204 53 17 chr13 19733210 19733391 -100550921 - L1_Rod LINE L1 -1161 4982 4766 3 735 226 306 0 45 chr13 19733628 19733675 -100550637 + ORR1B1-int LTR MaLR 608 647 -862 3 735 859 173 43 0 chr13 19733675 19733814 -100550498 + B1_Mus2 SINE Alu 1 145 -2 3 735 827 232 66 37 chr13 19733821 19734132 -100550180 + L1_Rod LINE L1 5261 5580 -300 3 735 12249 93 11 49 chr13 19734133 19736046 -100548266 - RLTR22_Mur LTR ERVK -8 1840 1 3 735 453 173 0 12 chr13 19736046 19736128 -100548184 + L1_Rod LINE L1 5554 5634 -213 3 735 706 201 172 6 chr13 19736509 19736689 -100547623 + B3 SINE B2 1 210 -6 3 735 1448 289 124 16 chr13 19737406 19738374 -100545938 - Lx4A LINE L1 -1142 5916 4800 3 735 484 140 21 0 chr13 19738432 19738525 -100545787 + (TA)n Simple_repeat Simple_repeat 1 95 0 3 735 379 274 68 24 chr13 19738933 19739093 -100545219 - L1MB4 LINE L1 -5817 828 569 3 735 1191 68 0 0 chr13 19739096 19739242 -100545070 + B1_Mus2 SINE Alu 2 147 0 3 735 203 55 0 53 chr13 19739245 19739283 -100545029 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 3 735 318 132 0 0 chr13 19740395 19740448 -100543864 + (TATG)n Simple_repeat Simple_repeat 4 56 0 3 735 2352 179 10 17 chr13 19740898 19741314 -100542998 + MTC LTR MaLR 1 413 -8 3 735 1112 107 29 29 chr13 19741474 19741491 -100542821 - B2_Mm2 SINE B2 -21 174 162 3 735 477 0 0 0 chr13 19741491 19741544 -100542768 + (TTTA)n Simple_repeat Simple_repeat 1 53 0 3 735 1112 107 29 29 chr13 19741544 19741700 -100542612 - B2_Mm2 SINE B2 -34 161 1 3 735 294 234 0 0 chr13 19741803 19741867 -100542445 - Lx9 LINE L1 -889 6755 6692 3 735 1411 210 104 6 chr13 19741885 19742239 -100542073 + Lx9 LINE L1 6796 7184 -460 3 735 294 151 0 0 chr13 19742284 19742357 -100541955 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 735 657 181 119 0 chr13 19742358 19742551 -100541761 + Lx9 LINE L1 7421 7636 -8 3 735 907 182 112 10 chr13 19743136 19743341 -100540971 - URR1A DNA MER1_type 0 226 1 3 735 182 281 17 34 chr13 19743745 19743804 -100540508 - MIR SINE MIR -92 170 113 3 735 2754 125 87 127 chr13 19744668 19745335 -100538977 + RMER6A LTR ERVK 110 749 -7 3 735 3789 49 16 37 chr13 19745336 19745849 -100538463 + RLTR44C LTR ERVK 1 502 0 3 735 441 0 0 0 chr13 19746244 19746293 -100538019 + (TTTA)n Simple_repeat Simple_repeat 3 51 0 3 735 1521 269 44 20 chr13 19746395 19746804 -100537508 - MTD LTR MaLR 0 419 1 3 735 3672 246 93 57 chr13 19746809 19747540 -100536772 - MTD-int LTR MaLR -5 1253 505 3 735 2257 123 3 0 chr13 19747540 19747866 -100536446 - ORR1A2 LTR MaLR 0 327 1 3 735 3672 246 93 57 chr13 19747866 19748344 -100535968 - MTD-int LTR MaLR -754 504 1 3 735 678 231 62 37 chr13 19748344 19748603 -100535709 - MTD LTR MaLR 0 419 108 3 735 1942 142 68 82 chr13 19748722 19749122 -100535190 + ORR1B1 LTR MaLR 1 394 0 3 735 389 264 180 38 chr13 19749316 19749655 -100534657 + L1_Rod LINE L1 445 831 -6341 3 735 202 204 0 0 chr13 19750747 19750762 -100533550 + A-rich Low_complexity Low_complexity 1 15 0 3 735 5621 120 108 8 chr13 19750762 19751679 -100532633 + Lx2 LINE L1 5987 6995 -2 3 735 202 204 0 0 chr13 19751679 19751707 -100532605 + A-rich Low_complexity Low_complexity 16 43 0 3 735 1792 199 38 12 chr13 19752784 19753130 -100531182 + ORR1D1 LTR MaLR 1 355 -19 3 735 216 86 0 0 chr13 19753131 19753166 -100531146 + (CATA)n Simple_repeat Simple_repeat 2 36 0 3 735 3248 141 275 39 chr13 19754156 19755517 -100528795 + L1_Mur1 LINE L1 3 1715 -4171 3 735 1043 89 7 0 chr13 19755517 19755663 -100528649 + B1_Mus1 SINE Alu 2 148 0 3 735 3248 102 5 62 chr13 19755663 19755749 -100528563 + L1_Mur1 LINE L1 1716 1767 -4119 3 735 306 254 0 27 chr13 19755753 19755826 -100528486 + tRNA-Ala-GCY_ tRNA tRNA 1 71 -4 3 735 14990 71 4 2 chr13 19755879 19759090 -100525222 + L1Md_F LINE L1 104 3322 -2561 3 735 5073 113 1 0 chr13 19759057 19759853 -100524459 - L1_Mm LINE L1 -1440 4443 3647 3 735 2797 99 24 21 chr13 19759855 19760279 -100524033 + L1_Mus3 LINE L1 6214 6638 0 3 735 437 296 0 0 chr13 19761284 19761392 -100522920 - PB1D7 SINE Alu -12 108 1 3 735 298 320 52 6 chr13 19761571 19761744 -100522568 + L1MCa LINE L1 399 579 -5466 3 735 1203 28 14 0 chr13 19761745 19761890 -100522422 + B1_Mus2 SINE Alu 1 147 0 3 735 529 22 55 11 chr13 19761890 19761981 -100522331 + (CAAAAA)n Simple_repeat Simple_repeat 3 97 0 3 735 240 35 0 0 chr13 19762022 19762051 -100522261 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 735 33 0 0 0 chr13 19762237 19762270 -100522042 + AT_rich Low_complexity Low_complexity 1 33 0 3 735 3854 85 71 19 chr13 19762298 19762876 -100521436 - L1_Mus3 LINE L1 -1 6637 6030 3 735 311 338 126 16 chr13 19762924 19763171 -100521141 + L1MCa LINE L1 675 948 -5097 3 735 483 18 0 0 chr13 19763251 19763307 -100521005 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 735 578 283 159 24 chr13 19763377 19763931 -100520381 + L1MCa LINE L1 1360 1988 -4763 3 735 867 219 65 0 chr13 19764172 19764373 -100519939 + B3 SINE B2 3 216 0 3 735 237 345 43 97 chr13 19765424 19765610 -100518702 + MER20 DNA MER1_type 13 188 -31 3 735 317 93 19 0 chr13 19765703 19765757 -100518555 + (TGAA)n Simple_repeat Simple_repeat 1 55 0 3 735 33 0 0 0 chr13 19766780 19766813 -100517499 + AT_rich Low_complexity Low_complexity 1 33 0 3 735 309 284 21 21 chr13 19767925 19768022 -100516290 - Lx8 LINE L1 -271 7202 7106 3 735 309 208 0 0 chr13 19768048 19768125 -100516187 + T-rich Low_complexity Low_complexity 1 77 0 3 735 209 197 49 0 chr13 19768242 19768303 -100516009 + (CAGAGA)n Simple_repeat Simple_repeat 3 66 0 3 735 324 0 0 0 chr13 19768783 19768819 -100515493 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 735 376 286 97 7 chr13 19768856 19769011 -100515301 + MER3 DNA MER1_type 2 170 -39 3 735 201 176 0 0 chr13 19769345 19769379 -100514933 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 735 396 0 0 0 chr13 19769625 19769669 -100514643 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 735 649 320 101 51 chr13 19770254 19770499 -100513813 + L1M2 LINE L1 2178 2450 -3397 3 735 315 0 0 0 chr13 19770499 19770534 -100513778 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 735 1801 310 101 31 chr13 19770534 19771392 -100512920 + L1M2 LINE L1 2451 3408 -2735 3 735 1933 106 86 0 chr13 19771392 19771695 -100512617 + ORR1A4 LTR MaLR 1 329 0 3 735 1801 309 100 30 chr13 19771695 19772590 -100511722 + L1M2 LINE L1 3409 4348 -1795 3 735 258 32 0 0 chr13 19772745 19772776 -100511536 + (T)n Simple_repeat Simple_repeat 1 31 0 3 735 9066 50 1 2 chr13 19772962 19774835 -100509477 - L1Md_F2 LINE L1 -1 6581 4712 3 735 1926 318 23 12 chr13 19775994 19776872 -100507440 + MYSERV6-int LTR ERVK 414 1300 -7659 3 735 1269 108 5 0 chr13 19776876 19777061 -100507251 - B2_Mm1t SINE B2 -1 192 7 3 735 3329 264 51 38 chr13 19777185 19778526 -100505786 + MYSERV6-int LTR ERVK 1427 2784 -6175 3 735 1612 296 61 44 chr13 19778526 19779411 -100504901 + MYSERV6-int LTR ERVK 4215 5114 -1436 3 735 557 238 90 34 chr13 19779422 19779600 -100504712 + RMER4A LTR ERVK 250 437 -29 3 735 360 217 33 47 chr13 19779619 19779769 -100504543 + MYSERV6-int LTR ERVK 5320 5467 -1083 3 735 576 0 0 0 chr13 19780419 19780483 -100503829 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 735 205 138 0 0 chr13 19780906 19780935 -100503377 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 735 203 229 0 0 chr13 19780999 19781034 -100503278 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 735 872 270 131 49 chr13 19781197 19781547 -100502765 - MTE2b LTR MaLR 0 379 1 3 735 228 330 89 117 chr13 19782297 19782623 -100501689 + ORR1E LTR MaLR 32 348 -11 3 735 1033 286 131 15 chr13 19783204 19783562 -100500750 - MTD LTR MaLR -14 405 13 3 735 1098 95 0 0 chr13 19783581 19783728 -100500584 - B1_Mm SINE Alu 0 147 1 3 735 996 9 0 0 chr13 19784253 19784366 -100499946 + (TTC)n Simple_repeat Simple_repeat 2 114 0 3 735 215 206 143 101 chr13 19784372 19784491 -100499821 - B3 SINE B2 -6 210 87 3 735 183 42 0 0 chr13 19785212 19785236 -100499076 + (CAAAAA)n Simple_repeat Simple_repeat 5 28 0 3 735 1176 69 23 0 chr13 19786489 19786662 -100497650 + L1_Mus3 LINE L1 6455 6631 -7 3 735 263 267 79 79 chr13 19786917 19786985 -100497327 + B3 SINE B2 90 165 -51 3 735 297 0 0 0 chr13 19786985 19787018 -100497294 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 735 315 0 0 0 chr13 19787018 19787052 -100497260 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 735 263 267 79 79 chr13 19787052 19787096 -100497216 + B3 SINE B2 166 202 -14 3 735 238 292 0 0 chr13 19787098 19787170 -100497142 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 735 40 79 0 0 chr13 19787462 19787551 -100496761 + AT_rich Low_complexity Low_complexity 1 89 0 3 735 186 176 0 0 chr13 19787677 19787728 -100496584 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 3 735 371 309 0 0 chr13 19787744 19787838 -100496474 - RSINE1 SINE B4 -69 96 3 3 735 291 250 192 0 chr13 19787838 19787940 -100496372 - Charlie5 DNA MER1_type -2497 127 6 3 735 180 0 0 0 chr13 19789126 19789146 -100495166 + (T)n Simple_repeat Simple_repeat 1 20 0 3 735 1265 62 0 4 chr13 19790108 19790354 -100493958 + (TC)n Simple_repeat Simple_repeat 1 244 0 3 735 180 0 0 0 chr13 19791765 19791785 -100492527 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 91 712 253 101 0 chr13 19791796 19791974 -100492338 - B3 SINE B2 -17 199 4 3 736 289 273 98 103 chr13 19792377 19792561 -100491751 - MLT1J LTR MaLR -24 488 306 3 736 335 226 42 31 chr13 19793190 19793286 -100491026 - Tigger1 DNA MER2_type -60 2358 2262 3 736 1200 314 75 31 chr13 19793700 19794337 -100489975 + Lx8 LINE L1 6627 7291 -182 3 736 349 189 22 0 chr13 19794365 19794455 -100489857 + GA-rich Low_complexity Low_complexity 3 94 0 3 736 28 48 0 0 chr13 19795286 19795328 -100488984 + AT_rich Low_complexity Low_complexity 1 42 0 3 736 423 296 18 73 chr13 19795352 19795516 -100488796 - RSINE1 SINE B4 -7 158 4 3 736 486 0 0 0 chr13 19795603 19795657 -100488655 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 736 287 243 195 53 chr13 19795821 19795934 -100488378 - MLT1J LTR MaLR -279 129 1 3 736 763 225 54 20 chr13 19796354 19796558 -100487754 - B3 SINE B2 -3 213 3 3 736 7167 4 0 0 chr13 19797499 19798289 -100486023 - L1Md_A LINE L1 0 6582 5793 3 736 5473 2 0 2 chr13 19798289 19798924 -100485388 + L1Md_A LINE L1 5158 5792 -91 3 736 293 284 0 88 chr13 19800104 19800297 -100484015 + C-rich Low_complexity Low_complexity 4 179 0 4 736 321 342 21 0 chr13 19800380 19800570 -100483742 + L1MEc LINE L1 527 720 -5680 4 736 638 269 47 7 chr13 19800652 19800802 -100483510 + B3A SINE B2 1 156 -42 4 736 459 0 0 0 chr13 19800837 19800888 -100483424 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 736 283 345 99 16 chr13 19801008 19801129 -100483183 + ORR1E LTR MaLR 4 134 -225 4 736 24 53 0 0 chr13 19802127 19802165 -100482147 + AT_rich Low_complexity Low_complexity 1 38 0 4 736 571 311 106 0 chr13 19802166 19802346 -100481966 - B3 SINE B2 -14 202 4 4 736 1172 247 92 62 chr13 19802814 19803216 -100481096 - RMER5 LTR ERV1 -75 459 46 4 736 180 0 0 0 chr13 19803352 19803372 -100480940 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 736 1562 139 0 34 chr13 19803396 19803663 -100480649 + Lx2 LINE L1 6571 6828 -169 4 736 4121 86 3 0 chr13 19803657 19804252 -100480060 - L1_Mur1 LINE L1 -908 4978 4382 4 736 267 83 0 0 chr13 19804240 19804288 -100480024 + L1_Mur1 LINE L1 1406 1453 -4433 4 736 5281 122 12 53 chr13 19804288 19805222 -100479090 - RLTR13A3 LTR ERVK 0 978 84 4 736 15748 130 24 8 chr13 19805223 19808080 -100476232 + L1_Mur1 LINE L1 1465 4367 -1519 4 736 236 200 49 12 chr13 19808238 19808319 -100475993 + L1MC LINE L1 4977 5060 -1086 4 736 318 106 0 0 chr13 19809630 19809677 -100474635 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 736 425 261 0 0 chr13 19809729 19809821 -100474491 - B3A SINE B2 -105 93 2 4 736 408 20 0 0 chr13 19811173 19811222 -100473090 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 736 187 177 16 16 chr13 19811234 19811297 -100473015 + (TG)n Simple_repeat Simple_repeat 1 63 0 4 736 1907 339 50 34 chr13 19811302 19812344 -100471968 - Lx8 LINE L1 -142 7331 6273 4 736 710 239 46 66 chr13 19812466 19812663 -100471649 - B3 SINE B2 -13 203 11 4 736 525 32 0 0 chr13 19812673 19812736 -100471576 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 736 451 286 90 18 chr13 19812765 19813205 -100471107 - Lx8 LINE L1 -1334 6139 5643 4 736 1675 301 88 18 chr13 19813268 19813991 -100470321 - Lx8 LINE L1 -39 7434 6661 4 736 415 235 16 2 chr13 19814023 19814146 -100470166 + MTC LTR MaLR 291 419 0 4 736 312 257 63 79 chr13 19814392 19814423 -100469889 + MER33 DNA MER1_type 30 57 -267 4 736 2275 100 19 3 chr13 19814423 19814745 -100469567 + ORR1A2 LTR MaLR 1 327 0 4 736 312 257 63 79 chr13 19814745 19814903 -100469409 + MER33 DNA MER1_type 58 216 -108 4 736 198 0 0 0 chr13 19815181 19815203 -100469109 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 736 283 294 39 0 chr13 19815221 19815323 -100468989 - Lx7 LINE L1 -398 7298 7193 4 736 297 197 0 0 chr13 19815366 19815432 -100468880 + (TTCA)n Simple_repeat Simple_repeat 3 68 0 4 736 3875 223 52 41 chr13 19815441 19816442 -100467870 - Lx6 LINE L1 -172 7288 6277 4 736 228 263 0 17 chr13 19816545 19816603 -100467709 + MLT1A0 LTR MaLR 309 365 0 4 736 517 357 171 16 chr13 19816906 19817287 -100467025 - MLT1F LTR MaLR -108 440 1 4 736 468 283 0 19 chr13 19817976 19818084 -100466228 + RSINE1 SINE B4 3 108 -57 4 736 234 0 0 0 chr13 19818098 19818124 -100466188 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 736 522 300 134 71 chr13 19818141 19818410 -100465902 - MTE-int LTR MaLR -146 1434 1149 4 736 528 30 0 0 chr13 19818474 19818540 -100465772 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 736 284 351 0 0 chr13 19818581 19818658 -100465654 - 4.5SRNA scRNA scRNA -11 83 7 4 736 430 320 109 21 chr13 19818664 19818903 -100465409 - MTE-int LTR MaLR -455 1125 866 4 736 894 306 75 18 chr13 19818907 19819296 -100465016 - MTE-int LTR MaLR -1136 444 34 4 736 189 0 0 0 chr13 19820115 19820136 -100464176 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 736 315 222 0 0 chr13 19822210 19822273 -100462039 - B4A SINE B4 -41 251 189 4 736 216 247 221 0 chr13 19822241 19822318 -100461994 - PB1D9 SINE Alu -7 113 20 4 736 228 67 0 0 chr13 19822628 19822658 -100461654 + (T)n Simple_repeat Simple_repeat 1 30 0 4 736 378 0 0 0 chr13 19826423 19826465 -100457847 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 736 374 315 55 22 chr13 19826497 19826828 -100457484 - L1_Mur3 LINE L1 0 5880 5528 4 736 44 0 0 0 chr13 19826970 19827014 -100457298 + AT_rich Low_complexity Low_complexity 1 44 0 4 736 321 325 206 12 chr13 19827048 19827213 -100457099 - B3A SINE B2 0 198 2 4 736 1348 33 60 6 chr13 19827252 19827434 -100456878 - L1Md_F3 LINE L1 -2 6582 6391 4 736 207 0 0 0 chr13 19828073 19828096 -100456216 + (T)n Simple_repeat Simple_repeat 1 23 0 4 736 233 291 11 11 chr13 19828539 19828626 -100455686 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 4 736 254 213 0 32 chr13 19828562 19828625 -100455687 + (TATG)n Simple_repeat Simple_repeat 4 64 0 4 736 292 260 97 29 chr13 19828641 19828744 -100455568 - B4 SINE B4 -22 270 161 4 736 260 203 14 72 chr13 19828781 19828850 -100455462 - RSINE1 SINE B4 -90 75 11 4 736 24 0 0 0 chr13 19829962 19829986 -100454326 + AT_rich Low_complexity Low_complexity 1 24 0 4 736 387 289 83 32 chr13 19830414 19830571 -100453741 - MER5A1 DNA MER1_type 0 166 2 4 736 246 255 137 11 chr13 19830578 19830673 -100453639 - MER3 DNA MER1_type -12 197 91 4 736 832 252 69 0 chr13 19830730 19830932 -100453380 - B3 SINE B2 0 216 1 4 736 5695 18 0 0 chr13 19830940 19831625 -100452687 + L1_Mm LINE L1 4604 5288 -595 4 736 180 179 0 0 chr13 19833872 19833911 -100450401 + GA-rich Low_complexity Low_complexity 2 40 0 4 736 509 283 17 109 chr13 19833916 19834154 -100450158 + B3 SINE B2 1 216 0 4 736 335 130 0 0 chr13 19834183 19834229 -100450083 + B1_Mus2 SINE Alu 5 50 -97 4 736 1088 84 0 0 chr13 19835208 19835350 -100448962 + B1_Mus1 SINE Alu 2 143 -5 4 736 7434 53 0 1 chr13 19835352 19836269 -100448043 + L1Md_T LINE L1 5667 6582 0 4 736 387 0 0 0 chr13 19836693 19836736 -100447576 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 736 21 57 0 0 chr13 19837538 19837573 -100446739 + AT_rich Low_complexity Low_complexity 1 35 0 4 736 666 85 0 0 chr13 19839414 19839508 -100444804 + (GAAA)n Simple_repeat Simple_repeat 1 94 0 4 736 234 176 58 14 chr13 19839508 19839523 -100444789 + polypurine Low_complexity Low_complexity 11 25 0 4 736 459 0 0 0 chr13 19839523 19839574 -100444738 + (GGAAA)n Simple_repeat Simple_repeat 5 55 0 4 736 1351 40 6 11 chr13 19839574 19839753 -100444559 + (GGGAA)n Simple_repeat Simple_repeat 1 178 0 4 736 234 176 58 14 chr13 19839753 19839794 -100444518 + polypurine Low_complexity Low_complexity 26 69 0 4 736 452 319 92 34 chr13 19841004 19841299 -100443013 - MER20B DNA MER1_type -180 603 292 4 736 216 0 0 0 chr13 19842796 19842820 -100441492 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 736 450 0 0 0 chr13 19845280 19845330 -100438982 + (TTTTA)n Simple_repeat Simple_repeat 5 54 0 4 736 774 278 0 25 chr13 19845330 19845533 -100438779 - B3 SINE B2 -16 200 3 4 736 1424 136 21 4 chr13 19845611 19845854 -100438458 - L1_Mus4 LINE L1 0 6636 6390 4 736 269 51 0 234 chr13 19845854 19845931 -100438381 + L1_Mus4 LINE L1 6308 6366 -270 4 736 24 32 0 0 chr13 19846547 19846578 -100437734 + AT_rich Low_complexity Low_complexity 1 31 0 4 736 1007 243 161 8 chr13 19847812 19848165 -100436147 + MTD LTR MaLR 13 419 0 4 736 1050 168 119 0 chr13 19848325 19848527 -100435785 + URR1A DNA MER1_type 1 226 0 4 736 26 82 0 0 chr13 19848963 19849024 -100435288 + AT_rich Low_complexity Low_complexity 1 61 0 4 736 198 143 0 0 chr13 19849090 19849125 -100435187 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 736 3071 262 62 40 chr13 19849148 19850005 -100434307 + Lx7 LINE L1 6206 7109 -587 4 736 5135 61 11 0 chr13 19850005 19850656 -100433656 + L1_Mus2 LINE L1 5909 6566 0 4 736 3071 262 62 40 chr13 19850656 19850838 -100433474 + Lx7 LINE L1 7110 7268 -428 4 736 180 0 0 0 chr13 19851205 19851225 -100433087 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 736 380 296 77 42 chr13 19852733 19852994 -100431318 - L1MEg LINE L1 -4517 1567 1298 4 736 368 321 102 64 chr13 19853098 19853518 -100430794 - L1MEg LINE L1 -4905 1179 744 4 736 277 211 246 9 chr13 19853711 19853821 -100430491 + RMER15 LTR ERVL 4 139 -436 4 736 616 297 76 29 chr13 19853849 19854126 -100430186 + RMER15 LTR ERVL 286 575 0 4 736 801 163 7 20 chr13 19854187 19854337 -100429975 - B2_Mm2 SINE B2 -5 190 43 4 736 676 131 197 0 chr13 19854426 19854563 -100429749 + URR1A DNA MER1_type 63 226 0 4 736 204 311 40 0 chr13 19855625 19855699 -100428613 + MIRm SINE MIR 73 149 -127 4 736 621 27 0 0 chr13 19856920 19856995 -100427317 + (CA)n Simple_repeat Simple_repeat 1 75 0 4 736 530 67 13 0 chr13 19856998 19857073 -100427239 + (GA)n Simple_repeat Simple_repeat 1 76 0 4 736 198 0 0 0 chr13 19857675 19857697 -100426615 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 4 736 1815 212 93 6 chr13 19859768 19860131 -100424181 + Lx9 LINE L1 7118 7514 -130 4 736 297 0 0 0 chr13 19860131 19860164 -100424148 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 736 1815 212 93 6 chr13 19860164 19860285 -100424027 + Lx9 LINE L1 7515 7644 0 4 736 26 30 0 0 chr13 19860285 19860318 -100423994 + AT_rich Low_complexity Low_complexity 1 33 0 4 736 418 194 0 131 chr13 19861036 19861143 -100423169 + B3 SINE B2 2 94 -122 4 736 2199 220 52 31 chr13 19861143 19861660 -100422652 + RLTR20A LTR ERVK 1 528 -13 4 736 550 271 25 12 chr13 19861620 19861781 -100422531 + B3 SINE B2 53 215 -1 4 736 310 262 47 0 chr13 19861825 19861932 -100422380 - Lx9 LINE L1 -214 7430 7319 4 736 552 137 0 0 chr13 19862425 19862527 -100421785 + (TG)n Simple_repeat Simple_repeat 1 102 0 4 736 388 192 29 0 chr13 19862575 19862679 -100421633 + Lx9 LINE L1 7538 7644 0 4 736 262 256 36 53 chr13 19862716 19862890 -100421422 + L1MA4 LINE L1 5434 5607 -549 4 736 788 213 0 7 chr13 19862890 19863041 -100421271 + B1_Mur4 SINE Alu 1 150 0 4 736 497 244 148 25 chr13 19863082 19863359 -100420953 + L1MA4 LINE L1 5595 5905 -395 4 736 843 39 0 0 chr13 19863364 19863467 -100420845 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 4 736 256 343 0 0 chr13 19863484 19863554 -100420758 + (CA)n Simple_repeat Simple_repeat 2 71 0 5 736 22 56 0 0 chr13 19863899 19863935 -100420377 + AT_rich Low_complexity Low_complexity 1 36 0 5 736 325 342 137 33 chr13 19863985 19864412 -100419900 + L2a LINE L2 2701 3176 -250 5 736 477 0 0 0 chr13 19864820 19864873 -100419439 + (TAA)n Simple_repeat Simple_repeat 2 54 0 5 736 241 205 200 24 chr13 19864896 19864981 -100419331 + PB1D10 SINE Alu 10 109 -8 5 736 720 279 108 7 chr13 19865157 19865453 -100418859 + Lx6 LINE L1 6988 7313 -147 5 736 261 0 0 0 chr13 19866074 19866103 -100418209 + (A)n Simple_repeat Simple_repeat 1 29 0 5 736 931 131 12 6 chr13 19866612 19866781 -100417531 + (TCCC)n Simple_repeat Simple_repeat 3 172 0 5 736 8798 61 7 6 chr13 19867089 19868947 -100415365 - L1_Mus2 LINE L1 0 6566 4712 5 736 981 305 79 49 chr13 19869105 19869598 -100414714 + Tigger7 DNA MER2_type 97 604 -1887 5 736 305 258 140 29 chr13 19869955 19870091 -100414221 - HAL1-3A_ME LINE L1 -423 2435 2285 5 736 657 38 0 0 chr13 19870102 19870182 -100414130 + (TTCCC)n Simple_repeat Simple_repeat 5 84 0 5 736 237 119 0 0 chr13 19870822 19870864 -100413448 + (C)n Simple_repeat Simple_repeat 1 42 0 5 736 228 355 13 0 chr13 19871930 19872006 -100412306 + MIRm SINE MIR 111 187 -89 5 736 5167 216 102 15 chr13 19873002 19875211 -100409101 + Lx5 LINE L1 4403 7025 -435 5 736 923 250 18 22 chr13 19875213 19875438 -100408874 + Lx5 LINE L1 7210 7433 -27 5 736 1058 314 42 64 chr13 19876338 19876698 -100407614 + MTE2b LTR MaLR 1 352 -27 5 736 31632 90 7 10 chr13 19877289 19880227 -100404085 + L1Md_F2 LINE L1 446 3333 -2550 5 736 1352 65 5 52 chr13 19880227 19880421 -100403891 + B2_Mm2 SINE B2 1 185 -10 5 736 31632 60 6 4 chr13 19880421 19882654 -100401658 + L1Md_F2 LINE L1 3334 5586 -297 5 736 7707 62 5 4 chr13 19882654 19883649 -100400663 + L1Md_F2 LINE L1 5587 6582 0 5 736 1477 32 0 9 chr13 19884153 19884472 -100399840 + (TTC)n Simple_repeat Simple_repeat 1 316 0 5 736 636 86 29 0 chr13 19884472 19884577 -100399735 + (TC)n Simple_repeat Simple_repeat 2 109 0 5 736 295 354 30 10 chr13 19886067 19886167 -100398145 + B4A SINE B4 2 103 -189 5 736 307 256 79 34 chr13 19886180 19886269 -100398043 + B4A SINE B4 200 292 0 5 736 1888 161 88 8 chr13 19886426 19886790 -100397522 + ORR1B1 LTR MaLR 2 394 0 5 736 967 277 3 14 chr13 19886971 19887267 -100397045 - Lx7 LINE L1 -806 6890 6598 5 736 260 57 0 0 chr13 19887577 19887612 -100396700 - Lx3_Mus LINE L1 -1192 5817 5783 5 736 9720 99 30 13 chr13 19887620 19889235 -100395077 - L1_Mur1 LINE L1 -886 5000 3358 5 736 387 0 0 0 chr13 19889613 19889656 -100394656 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 736 279 93 0 0 chr13 19889707 19889750 -100394562 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 736 348 332 52 56 chr13 19889761 19889994 -100394318 + MLT1H LTR MaLR 23 254 -295 5 736 22 0 0 0 chr13 19891346 19891368 -100392944 + AT_rich Low_complexity Low_complexity 1 22 0 5 736 261 312 38 92 chr13 19892147 19892440 -100391872 + B4A SINE B4 4 280 -12 5 736 237 98 0 0 chr13 19892466 19892507 -100391805 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 736 442 143 11 11 chr13 19892507 19892599 -100391713 + (TA)n Simple_repeat Simple_repeat 1 92 0 5 736 396 55 0 0 chr13 19893443 19893498 -100390814 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 5 736 1187 29 0 0 chr13 19893498 19893634 -100390678 - B1_Mus2 SINE Alu -11 136 1 5 736 270 0 0 0 chr13 19893687 19893717 -100390595 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 5 736 1058 302 22 0 chr13 19894225 19894582 -100389730 + Lx8 LINE L1 6392 6756 -717 5 736 253 373 26 39 chr13 19894628 19894862 -100389450 + Lx8 LINE L1 7115 7345 -128 5 736 180 355 73 16 chr13 19896299 19896422 -100387890 - L3 LINE CR1 -439 4050 3921 5 736 183 297 142 18 chr13 19896374 19896487 -100387825 + MIRc SINE MIR 41 167 -101 5 736 261 351 80 58 chr13 19897235 19897459 -100386853 - MER2 DNA MER2_type -116 229 1 5 736 238 234 21 0 chr13 19897859 19897918 -100386394 - ID4 SINE ID -11 72 12 5 736 270 352 23 31 chr13 19898686 19898815 -100385497 - MIR SINE MIR -122 140 13 5 736 257 258 33 22 chr13 19898876 19898967 -100385345 + L1MEe LINE L1 1020 1111 -4973 5 736 499 360 84 14 chr13 19899112 19899399 -100384913 + L1MEe LINE L1 1296 1602 -4406 5 736 1459 231 17 24 chr13 19900392 19900811 -100383501 + Lx7 LINE L1 5532 5953 -1743 5 736 975 282 24 40 chr13 19900836 19900878 -100383434 + RLTR18B LTR ERVK 5 45 -467 5 736 864 243 32 5 chr13 19900878 19901097 -100383215 - URR1B DNA MER1_type 0 225 1 5 736 975 282 24 40 chr13 19901097 19901350 -100382962 + RLTR18B LTR ERVK 46 295 -217 5 736 706 252 13 88 chr13 19901395 19901467 -100382845 + RLTR18B LTR ERVK 300 366 -146 5 736 3481 20 2 2 chr13 19901467 19901863 -100382449 + MTA_Mm LTR MaLR 1 396 0 5 736 8670 52 4 12 chr13 19901863 19902970 -100381342 + MTA_Mm-int LTR MaLR 1 1098 0 5 736 3376 30 2 12 chr13 19902970 19903370 -100380942 + MTA_Mm LTR MaLR 1 396 0 5 736 706 252 13 88 chr13 19903370 19903521 -100380791 + RLTR18B LTR ERVK 367 506 -6 5 736 821 197 2 9 chr13 19903590 19903739 -100380573 + B3 SINE B2 1 140 -53 5 736 1235 334 24 24 chr13 19903902 19904491 -100379821 + Lx7 LINE L1 6590 7178 -295 5 736 30 27 0 0 chr13 19906192 19906229 -100378083 + AT_rich Low_complexity Low_complexity 1 37 0 5 736 23 54 0 0 chr13 19906256 19906293 -100378019 + AT_rich Low_complexity Low_complexity 1 37 0 5 736 384 233 0 0 chr13 19906471 19906557 -100377755 + (CAGG)n Simple_repeat Simple_repeat 2 87 0 5 736 321 167 58 103 chr13 19906559 19906646 -100377666 + RLTR25B LTR ERVK 428 510 -518 5 736 774 76 0 0 chr13 19906580 19906685 -100377627 + B1_Mm SINE Alu 40 144 -3 5 736 1604 146 0 20 chr13 19906788 19907089 -100377223 - L1_Mur2 LINE L1 -3522 2355 2061 5 736 642 89 0 0 chr13 19907097 19907187 -100377125 + (TG)n Simple_repeat Simple_repeat 2 91 0 5 736 7008 149 66 127 chr13 19907194 19907996 -100376316 + Lx5 LINE L1 2260 3138 -2739 5 736 597 14 0 0 chr13 19907996 19908066 -100376246 + (TG)n Simple_repeat Simple_repeat 1 70 0 5 736 7008 149 66 127 chr13 19908066 19908564 -100375748 + Lx5 LINE L1 3139 3608 -2269 5 736 557 186 29 65 chr13 19908564 19908702 -100375610 - BGLII_B LTR ERVK -299 142 10 5 736 7008 149 66 127 chr13 19908702 19909224 -100375088 + Lx5 LINE L1 3609 4102 -1775 5 736 395 236 0 0 chr13 19909260 19909349 -100374963 + Lx5 LINE L1 4419 4507 -1370 5 736 6996 163 31 7 chr13 19909337 19911226 -100373086 + Lx5 LINE L1 4912 6854 -196 5 736 703 256 156 51 chr13 19911227 19911560 -100372752 + RLTR9A LTR ERVK 1 368 0 5 736 798 228 20 10 chr13 19911560 19911759 -100372553 + Lx5 LINE L1 6850 7050 0 5 736 228 67 0 0 chr13 19911771 19911801 -100372511 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 5 736 200 111 22 0 chr13 19913370 19913415 -100370897 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 5 736 239 239 60 0 chr13 19914689 19914756 -100369556 - MIRm SINE MIR -138 138 68 5 736 465 317 59 21 chr13 19914925 19915215 -100369097 + L1MA9 LINE L1 5615 5915 -397 5 736 250 316 13 0 chr13 19915410 19915486 -100368826 + ID4_ SINE ID 4 80 -3 5 736 1008 62 0 0 chr13 19916439 19916584 -100367728 + (TC)n Simple_repeat Simple_repeat 2 146 0 5 736 441 0 0 0 chr13 19916584 19916632 -100367680 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 736 539 256 82 15 chr13 19916923 19917058 -100367254 - RSINE1 SINE B4 -21 144 1 5 736 255 61 0 0 chr13 19917087 19917120 -100367192 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 5 736 68 24 0 0 chr13 19917207 19917289 -100367023 + AT_rich Low_complexity Low_complexity 1 82 0 5 736 262 246 21 48 chr13 19917367 19917512 -100366800 + A-rich Low_complexity Low_complexity 3 143 0 5 736 275 315 65 0 chr13 19917519 19917627 -100366685 - Lx7 LINE L1 -389 7307 7193 5 736 2417 218 100 29 chr13 19917697 19917721 -100366591 - Lx6 LINE L1 -171 7289 7271 5 736 1852 134 75 45 chr13 19917721 19918119 -100366193 - RMER17C LTR ERVK 0 410 1 5 736 2417 218 100 29 chr13 19918119 19918714 -100365598 - Lx6 LINE L1 -190 7270 6626 5 736 227 299 75 38 chr13 19919874 19919954 -100364358 + LTR75_1 LTR ERV1 278 360 -186 5 736 432 37 0 0 chr13 19920065 19920119 -100364193 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 736 311 228 223 47 chr13 19920241 19920434 -100363878 + L1MEg LINE L1 618 844 -5240 5 736 22 35 0 0 chr13 19920715 19920744 -100363568 + AT_rich Low_complexity Low_complexity 1 29 0 5 736 822 130 0 0 chr13 19920816 19920947 -100363365 + (TC)n Simple_repeat Simple_repeat 1 131 0 5 736 578 415 40 11 chr13 19920958 19921233 -100363079 - B4 SINE B4 -2 290 8 5 736 245 51 26 0 chr13 19921300 19921339 -100362973 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 5 736 499 172 9 116 chr13 19921808 19922032 -100362280 + RMER17C LTR ERVK 76 275 -135 5 736 244 331 16 0 chr13 19922172 19922293 -100362019 + L1ME3A LINE L1 5869 5991 -182 5 736 1127 75 0 14 chr13 19922701 19922849 -100361463 + B1_Mus2 SINE Alu 1 146 -1 5 736 216 0 0 0 chr13 19922853 19922877 -100361435 + (CAAAC)n Simple_repeat Simple_repeat 1 24 0 5 737 228 255 37 19 chr13 19923404 19923512 -100360800 - Lx7 LINE L1 -8 7688 7579 5 737 732 23 0 0 chr13 19923534 19923620 -100360692 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 5 737 2895 316 43 19 chr13 19923695 19924925 -100359387 - Lx7 LINE L1 -389 7307 6048 5 737 310 121 0 29 chr13 19925091 19925159 -100359153 + CT-rich Low_complexity Low_complexity 2 67 0 5 737 27593 100 17 4 chr13 19925296 19926635 -100357677 - L1_Mus3 LINE L1 -7 6631 5278 5 737 306 0 0 0 chr13 19926635 19926669 -100357643 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 5 737 27593 131 14 5 chr13 19926669 19931182 -100353130 - L1_Mus3 LINE L1 -606 5277 675 5 737 749 124 0 0 chr13 19931464 19931577 -100352735 + Lx4B LINE L1 6439 6551 -507 5 737 483 18 0 0 chr13 19932394 19932450 -100351862 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 737 197 243 25 45 chr13 19932741 19932827 -100351485 - MIRc SINE MIR -57 205 123 5 737 361 218 39 0 chr13 19933361 19933439 -100350873 + MLT1A LTR MaLR 2 82 -292 5 737 509 325 171 63 chr13 19933634 19934091 -100350221 - L2 LINE L2 -498 2921 2416 5 737 309 297 128 22 chr13 19934131 19934310 -100350002 + RMER5 LTR ERV1 337 534 0 5 737 330 26 0 0 chr13 19935009 19935048 -100349264 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 737 358 313 87 27 chr13 19935048 19935347 -100348965 - L1_Rod LINE L1 -3221 2626 2310 5 737 5216 60 0 22 chr13 19935636 19935909 -100348403 + L1_Mm LINE L1 3453 3725 -2158 5 737 1721 10 0 0 chr13 19935909 19936101 -100348211 + B2_Mm1a SINE B2 2 193 0 5 737 5216 60 0 22 chr13 19936101 19936560 -100347752 + L1_Mm LINE L1 3726 4169 -1714 5 737 3071 187 79 50 chr13 19937006 19937836 -100346476 - RMER13A LTR ERVK -76 832 5 5 737 3378 154 35 24 chr13 19938011 19938602 -100345710 + Lx4A LINE L1 6458 7055 -3 6 737 187 350 130 0 chr13 19938989 19939089 -100345223 - MIRb SINE MIR -130 138 26 6 737 621 67 9 19 chr13 19939205 19939312 -100345000 - L1Md_F2 LINE L1 -4 6578 6473 6 737 23367 159 14 12 chr13 19939312 19945315 -100338997 + Lx2A LINE L1 854 6852 -156 6 737 275 325 114 84 chr13 19946378 19946521 -100337791 - Lx8 LINE L1 -816 6657 6527 6 737 516 95 0 0 chr13 19946521 19946605 -100337707 + (CA)n Simple_repeat Simple_repeat 2 85 0 6 737 275 325 114 84 chr13 19946605 19946723 -100337589 - Lx8 LINE L1 -947 6526 6388 6 737 444 264 21 35 chr13 19947087 19947232 -100337080 - Lx8 LINE L1 -606 6867 6725 6 737 1274 260 106 13 chr13 19947243 19947641 -100336671 + Lx8 LINE L1 6269 6703 -770 6 737 1888 142 47 13 chr13 19947663 19948047 -100336265 + RMER17C LTR ERVK 1 397 -13 6 737 330 26 0 0 chr13 19948054 19948093 -100336219 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 6 737 1215 76 6 0 chr13 19948093 19948251 -100336061 - B2_Mm1t SINE B2 -33 160 2 6 737 222 273 26 13 chr13 19949689 19949767 -100334545 + GA-rich Low_complexity Low_complexity 6 84 0 6 737 2679 52 26 0 chr13 19949793 19950138 -100334174 + L1Md_F2 LINE L1 6217 6570 -12 6 737 237 104 104 0 chr13 19950152 19950200 -100334112 + B2_Mm1t SINE B2 138 190 -3 6 737 279 0 0 0 chr13 19950248 19950279 -100334033 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 737 513 0 0 0 chr13 19950279 19950336 -100333976 + (CTATA)n Simple_repeat Simple_repeat 3 59 0 6 737 377 220 87 11 chr13 19950462 19950554 -100333758 + ID_B1 SINE B4 116 214 -10 6 737 536 310 29 6 chr13 19951369 19951544 -100332768 - MER58A DNA MER1_type 0 224 46 6 737 251 301 113 12 chr13 19952428 19952596 -100331716 + L1MA5 LINE L1 5743 5927 -373 6 737 521 30 15 0 chr13 19953421 19953488 -100330824 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 6 737 327 322 139 8 chr13 19953508 19953630 -100330682 - RSINE1 SINE B4 -17 148 11 6 737 1601 172 42 15 chr13 19954376 19954841 -100329471 + MT2A LTR ERVL 1 525 -8 6 737 291 292 12 19 chr13 19957150 19957261 -100327051 + MTEb LTR MaLR 246 375 -4 6 737 486 0 0 0 chr13 19957413 19957467 -100326845 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 737 403 311 32 8 chr13 19958421 19958544 -100325768 + RSINE1 SINE B4 38 163 -2 6 737 182 37 0 36 chr13 19958557 19958585 -100325727 + (TAA)n Simple_repeat Simple_repeat 2 28 0 6 737 244 420 20 40 chr13 19958898 19959047 -100325265 + LTR88c LTR Genie? 691 836 -26 6 737 748 279 140 21 chr13 19959237 19959523 -100324789 + MER2 DNA MER2_type 1 320 -25 6 737 185 208 113 0 chr13 19959553 19959606 -100324706 + MIRb SINE MIR 187 245 -23 6 737 343 331 100 79 chr13 19960065 19960867 -100323445 + L1MB8 LINE L1 969 1787 -5547 6 737 281 322 93 90 chr13 19960841 19961147 -100323165 + L1MB8 LINE L1 4731 5064 -1942 6 737 348 209 300 0 chr13 19961147 19961257 -100323055 + B1_Mur2 SINE Alu 1 143 -6 6 737 281 322 93 90 chr13 19961257 19961323 -100322989 + L1MB8 LINE L1 5065 5111 -1895 6 737 1180 55 7 0 chr13 19961323 19961469 -100322843 + B1_Mus1 SINE Alu 2 148 0 6 737 281 322 93 90 chr13 19961469 19961675 -100322637 + L1MB8 LINE L1 5112 5312 -1694 6 737 563 241 110 5 chr13 19961787 19962163 -100322149 + L1MB8 LINE L1 5936 6346 -692 6 737 238 255 0 18 chr13 19962164 19962220 -100322092 + GA-rich Low_complexity Low_complexity 1 55 0 6 737 180 0 0 0 chr13 19962280 19962300 -100322012 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 737 2424 158 30 0 chr13 19962313 19962713 -100321599 - MTC LTR MaLR 0 421 10 6 737 424 309 127 21 chr13 19962727 19963113 -100321199 + L1MB8 LINE L1 6536 6962 -76 6 737 781 255 124 31 chr13 19963156 19963601 -100320711 - Lx8 LINE L1 -1295 6178 5693 6 737 331 284 39 0 chr13 19963631 19963733 -100320579 + Lx8 LINE L1 7152 7257 -216 6 737 345 333 0 0 chr13 19963842 19963935 -100320377 + Lx7 LINE L1 6900 6992 -704 6 737 217 83 41 20 chr13 19963938 19963987 -100320325 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 6 737 8593 153 11 52 chr13 19963987 19965087 -100319225 + Lx2B LINE L1 4249 5280 -606 6 737 186 43 0 0 chr13 19965087 19965110 -100319202 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 737 8593 179 31 31 chr13 19965110 19966794 -100317518 + Lx2B LINE L1 5281 6993 -7 6 737 574 285 146 4 chr13 19966811 19967072 -100317240 + Lx7 LINE L1 6996 7293 -403 6 737 1137 94 0 0 chr13 19967084 19967310 -100317002 + (TG)n Simple_repeat Simple_repeat 1 226 0 6 737 233 237 111 66 chr13 19967368 19967549 -100316763 + Lx7 LINE L1 7507 7695 -1 6 737 632 157 9 0 chr13 19967745 19967853 -100316459 + URR1B DNA MER1_type 110 218 -7 6 737 4084 44 16 8 chr13 19969421 19969929 -100314383 + L1Md_F2 LINE L1 6070 6581 -1 6 737 198 0 0 0 chr13 19969988 19970010 -100314302 + (A)n Simple_repeat Simple_repeat 1 22 0 6 737 990 78 0 0 chr13 19970038 19970192 -100314120 + (TG)n Simple_repeat Simple_repeat 2 155 0 6 737 21 0 0 0 chr13 19971706 19971727 -100312585 + AT_rich Low_complexity Low_complexity 1 21 0 6 737 341 295 76 83 chr13 19971846 19972123 -100312189 + B4A SINE B4 2 276 -16 6 737 183 42 0 0 chr13 19972128 19972152 -100312160 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 737 304 0 0 0 chr13 19973163 19973198 -100311114 + U2 snRNA snRNA 1 35 -153 6 737 1489 288 116 33 chr13 19973565 19974435 -100309877 + Lx9 LINE L1 6656 7597 -47 6 737 200 111 28 0 chr13 19974489 19974525 -100309787 + (TATG)n Simple_repeat Simple_repeat 2 38 0 6 737 1523 165 90 2 chr13 19975227 19975531 -100308781 - IAPEY3_LTR LTR ERVK -7 360 1 6 737 441 0 0 0 chr13 19975779 19975828 -100308484 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 737 283 304 111 69 chr13 19976583 19976844 -100307468 + B4 SINE B4 2 273 -19 6 737 453 19 0 0 chr13 19977067 19977121 -100307191 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 737 238 273 132 32 chr13 19977135 19977385 -100306927 - L1MC5 LINE L1 -48 7913 7639 6 737 318 240 88 0 chr13 19977392 19977517 -100306795 - Lx6 LINE L1 -9 7451 7316 6 737 344 235 79 8 chr13 19978310 19978427 -100305885 - L1MC5 LINE L1 -934 6851 6706 6 737 260 274 0 64 chr13 19980086 19980164 -100304148 + ID2 SINE ID 5 77 -6 6 737 207 0 0 0 chr13 19980192 19980215 -100304097 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 737 436 250 76 0 chr13 19980382 19980514 -100303798 - Lx9 LINE L1 -191 7453 7312 6 737 26 30 0 0 chr13 19980673 19980706 -100303606 + AT_rich Low_complexity Low_complexity 1 33 0 6 737 399 329 19 70 chr13 19981997 19982154 -100302158 + RSINE1 SINE B4 17 165 0 6 737 21 0 0 0 chr13 19982180 19982201 -100302111 + AT_rich Low_complexity Low_complexity 1 21 0 6 737 3537 94 25 84 chr13 19982204 19982810 -100301502 - L1_Mus1 LINE L1 0 6567 5998 6 737 7730 47 1 2 chr13 19982811 19983808 -100300504 - L1Md_F2 LINE L1 0 6582 5587 6 737 8645 63 2 0 chr13 19983814 19985000 -100299312 + L1_Mm LINE L1 2769 3956 -1927 6 737 7922 129 29 22 chr13 19984998 19986852 -100297460 - L1Md_F LINE L1 -3433 2450 584 6 737 198 71 0 0 chr13 19986877 19986905 -100297407 + (G)n Simple_repeat Simple_repeat 1 28 0 6 737 210 136 0 0 chr13 19987376 19987420 -100296892 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 737 581 308 58 21 chr13 19987678 19987867 -100296445 - RMER30 DNA MER1_type -2 200 5 6 737 534 152 0 0 chr13 19988194 19988286 -100296026 + CT-rich Low_complexity Low_complexity 2 93 0 6 737 5334 143 60 8 chr13 19988767 19989622 -100294690 + RMER19B LTR ERVK 4 902 0 6 737 312 352 70 44 chr13 19992116 19992345 -100291967 + LTR85a LTR Gypsy? 279 513 -189 6 737 3393 193 58 73 chr13 19992849 19993738 -100290574 - Lx7 LINE L1 -172 7524 6649 6 737 232 348 0 14 chr13 19994519 19994589 -100289723 + ID4_ SINE ID 5 73 -10 6 737 278 312 21 31 chr13 19994781 19994877 -100289435 + RMER30 DNA MER1_type 106 200 -2 6 737 25471 108 5 4 chr13 19995238 20000000 -100284312 - L1_Mus1 LINE L1 -1 6566 1803 6 737 3938 96 10 10 chr13 20000000 20000516 -100283796 - L1Md_F LINE L1 -4081 1802 1286 1 737 3344 52 26 0 chr13 20000516 20000902 -100283410 - MTA_Mm LTR MaLR 0 396 1 2 737 4610 147 65 7 chr13 20000902 20001756 -100282556 - L1Md_F LINE L1 -4598 1285 380 1 737 851 297 82 26 chr13 20003272 20003576 -100280736 - MER2 DNA MER2_type -1 344 24 3 737 336 348 55 80 chr13 20003814 20004089 -100280223 - LTR85b LTR Gypsy? -515 269 2 4 737 1264 91 85 0 chr13 20004570 20004746 -100279566 - B2_Mm2 SINE B2 -4 191 1 5 737 480 18 0 0 chr13 20004805 20004862 -100279450 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 737 245 328 107 17 chr13 20005219 20005396 -100278916 - LTR84b LTR ERVL -400 361 169 7 737 7276 82 7 0 chr13 20005826 20006713 -100277599 + RLTR13B1 LTR ERVK 1 893 0 8 737 1091 159 11 6 chr13 20006738 20006921 -100277391 + B2_Mm1t SINE B2 1 184 -9 9 737 381 269 28 19 chr13 20014400 20014506 -100269806 - PB1D7 SINE Alu -1 119 13 1 737 378 0 0 0 chr13 20014803 20014845 -100269467 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 737 912 243 138 28 chr13 20016772 20017090 -100267222 - RLTR14 LTR ERV1 0 382 30 1 737 496 312 70 76 chr13 20018488 20018804 -100265508 - MLT2B1 LTR ERVL -195 325 12 1 737 262 219 384 0 chr13 20019069 20019142 -100265170 - B1F SINE Alu -44 105 5 1 737 222 262 0 0 chr13 20019107 20019149 -100265163 - ID_B1 SINE B4 -104 120 79 1 737 250 307 80 0 chr13 20019202 20019290 -100265022 - B4A SINE B4 0 292 198 1 737 455 250 110 7 chr13 20019746 20019891 -100264421 - MTD LTR MaLR 0 419 260 1 737 432 181 0 0 chr13 20019965 20020048 -100264264 + CT-rich Low_complexity Low_complexity 2 84 0 1 737 630 130 73 9 chr13 20020080 20020189 -100264123 - B1_Mur3 SINE Alu -6 143 28 1 737 841 216 49 29 chr13 20020192 20020397 -100263915 - MTD LTR MaLR -198 221 13 1 737 1375 324 34 11 chr13 20020435 20020959 -100263353 - Lx8 LINE L1 -523 6950 6415 2 737 742 281 69 55 chr13 20020960 20021230 -100263082 - B4A SINE B4 -15 277 1 2 737 201 74 0 0 chr13 20021806 20021833 -100262479 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2 737 12781 98 24 5 chr13 20022492 20025124 -100259188 + L1Md_F2 LINE L1 238 2906 -2977 2 737 9781 82 1 2 chr13 20025137 20026419 -100257893 + L1Md_F2 LINE L1 4305 5585 -298 2 737 7895 78 3 10 chr13 20026420 20027411 -100256901 + L1Md_F2 LINE L1 5587 6570 -12 2 737 969 244 14 36 chr13 20028020 20028241 -100256071 - B3 SINE B2 0 216 1 2 737 360 292 172 74 chr13 20029215 20029511 -100254801 - MLT1C LTR MaLR 0 467 143 2 737 29 0 0 0 chr13 20029677 20029706 -100254606 + AT_rich Low_complexity Low_complexity 1 29 0 2 737 21 0 0 0 chr13 20030848 20030869 -100253443 + AT_rich Low_complexity Low_complexity 1 21 0 2 737 977 133 30 12 chr13 20031403 20031570 -100252742 + L1_Mus1 LINE L1 6398 6567 0 2 737 30670 96 66 18 chr13 20031732 20034009 -100250303 + Lx3_Mus LINE L1 207 3147 -2739 2 737 4634 60 9 0 chr13 20034009 20034557 -100249755 + L1Md_F2 LINE L1 6030 6582 0 3 737 30670 77 66 14 chr13 20034557 20037417 -100246895 + Lx3_Mus LINE L1 3148 6051 -958 2 737 288 0 0 0 chr13 20037417 20037449 -100246863 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 3 737 9726 77 55 13 chr13 20037449 20038386 -100245926 + Lx3_Mus LINE L1 6052 7006 -3 2 737 335 315 142 24 chr13 20039860 20040029 -100244283 + MIRb SINE MIR 7 195 -73 3 737 21 71 0 0 chr13 20040345 20040387 -100243925 + AT_rich Low_complexity Low_complexity 1 42 0 3 737 313 280 78 42 chr13 20040426 20040738 -100243574 + L1M5 LINE L1 5126 5454 -708 3 737 255 315 34 0 chr13 20040921 20041010 -100243302 + MER5B DNA MER1_type 32 123 -55 3 737 1724 26 5 0 chr13 20041011 20041200 -100243112 - B2_Mm1a SINE B2 -2 191 2 3 737 646 285 20 7 chr13 20041994 20042146 -100242166 + RSINE1 SINE B4 4 157 -8 3 737 432 231 0 0 chr13 20042153 20042283 -100242029 + (CA)n Simple_repeat Simple_repeat 2 131 0 3 737 1865 245 166 36 chr13 20042290 20042894 -100241418 + Lx9 LINE L1 6807 7460 -184 3 737 300 27 0 0 chr13 20042894 20042931 -100241381 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 737 1865 245 166 36 chr13 20042931 20043045 -100241267 + Lx9 LINE L1 7461 7618 -26 3 737 686 235 0 7 chr13 20043575 20043725 -100240587 + Lx9 LINE L1 6723 6871 -773 4 737 192 259 0 18 chr13 20043726 20043781 -100240531 + L2a LINE L2 3018 3071 -355 4 737 186 43 0 0 chr13 20043920 20043943 -100240369 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 737 194 105 0 26 chr13 20044128 20044167 -100240145 + (TAAAAA)n Simple_repeat Simple_repeat 4 41 0 4 737 252 248 57 79 chr13 20044424 20044564 -100239748 - RLTR42-int LTR ERVK -4128 1394 1258 4 737 399 92 0 0 chr13 20044639 20044704 -100239608 + (A)n Simple_repeat Simple_repeat 1 65 0 4 737 183 42 0 0 chr13 20044767 20044791 -100239521 + (CTAAA)n Simple_repeat Simple_repeat 3 26 0 4 737 183 42 0 0 chr13 20044875 20044899 -100239413 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 4 737 188 364 15 0 chr13 20045013 20045079 -100239233 - L2a LINE L2 -18 3408 3342 4 737 299 296 0 108 chr13 20045150 20045167 -100239145 + MT2B LTR ERVL 150 152 -449 5 737 607 270 0 0 chr13 20045167 20045282 -100239030 + B1_Mus1 SINE Alu 2 116 -32 5 737 223 106 20 41 chr13 20045300 20045349 -100238963 + GA-rich Low_complexity Low_complexity 3 50 0 5 737 1703 158 79 52 chr13 20045905 20046088 -100238224 + ORR1C1 LTR MaLR 1 179 -199 5 737 986 102 0 6 chr13 20046088 20046265 -100238047 + (TC)n Simple_repeat Simple_repeat 2 177 0 5 737 1703 158 79 52 chr13 20046265 20046409 -100237903 + ORR1C1 LTR MaLR 180 336 -42 5 737 39427 4 0 0 chr13 20046409 20051632 -100232680 + L1Md_A LINE L1 363 5586 -297 5 737 9580 2 0 11 chr13 20051632 20052659 -100231653 + L1Md_A LINE L1 5587 6582 0 5 737 360 146 0 0 chr13 20052665 20052720 -100231592 + ORR1C1 LTR MaLR 324 378 0 5 737 238 268 79 14 chr13 20053389 20053529 -100230783 + L1M2 LINE L1 1243 1391 -4456 5 737 415 127 157 0 chr13 20053599 20053701 -100230611 + B2_Mm2 SINE B2 2 138 -55 5 737 488 71 111 83 chr13 20053701 20053809 -100230503 - RLTR47_MM LTR ERV1 0 532 422 5 92 1160 66 175 15 chr13 20053820 20054020 -100230292 - RLTR47_MM LTR ERV1 -300 232 1 5 738 393 22 0 0 chr13 20054042 20054088 -100230224 + (TTAG)n Simple_repeat Simple_repeat 3 48 0 5 738 325 321 131 42 chr13 20054091 20054115 -100230197 + L1_Mur3 LINE L1 1466 1489 -4391 6 738 743 308 9 19 chr13 20054115 20054330 -100229982 + ID_B1 SINE B4 5 217 -7 6 738 325 321 131 42 chr13 20054330 20054786 -100229526 + L1_Mur3 LINE L1 1490 1989 -3891 6 738 234 0 0 0 chr13 20054878 20054904 -100229408 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 738 403 225 69 110 chr13 20054944 20055089 -100229223 - RLTR25B LTR ERVK 0 1103 965 6 738 697 136 30 8 chr13 20055090 20055223 -100229089 - RLTR25B LTR ERVK -253 775 640 6 738 463 282 97 8 chr13 20055225 20055497 -100228815 + L1M2 LINE L1 3033 3324 -2523 5 738 958 69 8 15 chr13 20055497 20055629 -100228683 + B1_Mus1 SINE Alu 18 148 0 6 738 269 259 44 29 chr13 20055730 20055895 -100228417 + L1MD LINE L1 3458 3609 -2537 6 738 2322 60 66 46 chr13 20055895 20056243 -100228069 + LTRIS_Mm LTR ERV1 1 355 -127 6 738 1039 297 64 64 chr13 20056243 20056836 -100227476 + L1M2 LINE L1 3739 4331 -1812 5 738 40 0 0 0 chr13 20056849 20056889 -100227423 + AT_rich Low_complexity Low_complexity 1 40 0 6 738 199 72 0 45 chr13 20056889 20056933 -100227379 + (TTA)n Simple_repeat Simple_repeat 3 44 0 6 738 1196 132 17 10 chr13 20056940 20057145 -100227167 - B2_Mm2 SINE B2 -1 215 2 6 738 977 179 44 100 chr13 20057155 20057496 -100226816 - RLTRETN_Mm LTR ERVK 0 322 1 7 738 1748 55 13 0 chr13 20057515 20057751 -100226561 + BGLII LTR ERVK 183 421 0 7 738 567 240 68 8 chr13 20057766 20058001 -100226311 + L1M2 LINE L1 4402 4650 -1490 5 738 618 311 38 0 chr13 20058138 20058321 -100225991 + B4A SINE B4 1 190 -102 7 738 192 327 27 45 chr13 20059303 20059415 -100224897 + L2c LINE L2 3256 3365 -22 7 738 2150 192 59 13 chr13 20059756 20060191 -100224121 + L1VL4 LINE L1 356 810 -5492 7 738 261 0 0 0 chr13 20060191 20060220 -100224092 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 738 2150 192 59 13 chr13 20060220 20060306 -100224006 + L1VL4 LINE L1 811 900 -5402 7 738 450 82 0 0 chr13 20060278 20060351 -100223961 + MusHAL1 LINE L1 135 207 -2505 7 738 7695 63 2 0 chr13 20060344 20061373 -100222939 + L1Md_F2 LINE L1 4555 5585 -298 7 738 7838 53 9 2 chr13 20061374 20062348 -100221964 + L1Md_F2 LINE L1 5587 6567 -15 7 738 18263 142 9 8 chr13 20062359 20065714 -100218598 + L1_Mm LINE L1 1408 4767 -1116 7 738 1164 84 0 8 chr13 20065708 20065892 -100218420 + L1_Mus3 LINE L1 6148 6319 -265 7 738 382 321 44 15 chr13 20065995 20066131 -100218181 - MIR SINE MIR -116 146 7 8 738 724 282 112 99 chr13 20066657 20067031 -100217281 - MTE2a LTR MaLR 0 379 1 8 738 207 291 85 78 chr13 20067571 20067724 -100216588 - MIRc SINE MIR -2 266 113 8 738 377 301 64 16 chr13 20068582 20068707 -100215605 + MLT1A LTR MaLR 1 131 -243 8 738 354 311 0 51 chr13 20068786 20068942 -100215370 + B1F2 SINE Alu 1 148 -1 8 738 204 0 54 27 chr13 20068956 20068993 -100215319 + (CAA)n Simple_repeat Simple_repeat 2 39 0 8 738 514 82 71 10 chr13 20069358 20069457 -100214855 - L1_Mur2 LINE L1 -1429 4448 4344 8 738 1479 218 72 74 chr13 20069457 20069548 -100214764 + MTD LTR MaLR 44 122 -297 8 738 1149 50 0 0 chr13 20069548 20069687 -100214625 - B1_Mm SINE Alu -8 139 1 8 738 1479 218 72 74 chr13 20069687 20069972 -100214340 + MTD LTR MaLR 123 419 0 8 738 249 304 78 0 chr13 20070181 20070283 -100214029 + Tigger5 DNA MER2_type 2227 2336 -70 8 738 1615 236 22 177 chr13 20070317 20071039 -100213273 - RMER19C LTR ERVK -1 610 1 9 738 422 79 0 16 chr13 20071925 20071989 -100212323 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 9 738 236 53 0 26 chr13 20072080 20072119 -100212193 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 9 738 232 154 0 0 chr13 20072273 20072312 -100212000 + B3 SINE B2 3 41 -175 9 738 455 165 24 0 chr13 20072312 20072397 -100211915 + L1_Mur2 LINE L1 5140 5226 -651 9 738 7526 66 2 0 chr13 20072396 20073501 -100210811 + L1_Mus1 LINE L1 5461 6566 -1 9 738 7459 84 9 6 chr13 20073505 20074852 -100209460 + L1_Mus3 LINE L1 5288 6638 0 9 738 766 264 21 27 chr13 20074860 20075047 -100209265 + B3 SINE B2 27 212 -4 9 738 230 348 106 64 chr13 20075705 20075923 -100208389 - MLT1J1 LTR MaLR -166 278 52 9 738 233 325 60 0 chr13 20075966 20076049 -100208263 + MLT1F1 LTR MaLR 1 88 -481 9 738 1321 278 52 20 chr13 20076066 20076474 -100207838 - RMER5 LTR ERV1 0 534 114 1 738 1896 317 75 50 chr13 20076660 20076697 -100207615 - Lx8 LINE L1 -199 7274 7238 1 738 414 0 0 0 chr13 20076697 20076743 -100207569 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 1 738 1896 317 75 50 chr13 20076743 20077933 -100206379 - Lx8 LINE L1 -236 7237 6016 1 738 1290 180 49 21 chr13 20077964 20078248 -100206064 + RMER1A Other Other 316 607 -423 1 738 5456 267 63 33 chr13 20078247 20078810 -100205502 - L1_Mur3 LINE L1 -101 5779 5213 1 738 291 28 0 0 chr13 20078810 20078846 -100205466 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 738 5456 267 63 33 chr13 20078846 20080661 -100203651 - L1_Mur3 LINE L1 -668 5212 3332 1 738 694 207 20 7 chr13 20080705 20080851 -100203461 - B1_Mus1 SINE Alu 0 148 1 1 738 285 256 37 0 chr13 20080887 20080969 -100203343 + L1_Mur3 LINE L1 3887 3971 -1909 1 738 366 241 57 0 chr13 20080969 20081110 -100203202 - L1_Mur3 LINE L1 -2597 3283 3135 1 738 2596 97 19 37 chr13 20081133 20081640 -100202672 - RMER17A LTR ERVK -391 498 1 1 738 3452 50 63 14 chr13 20081640 20082146 -100202166 - RMER17A-int LTR ERVK 0 1728 1198 1 738 483 99 36 24 chr13 20082144 20082227 -100202085 - RMER17A-int LTR ERVK -1625 103 20 1 738 1914 143 26 49 chr13 20082227 20082617 -100201695 - RMER17A LTR ERVK -103 648 268 1 738 2256 270 55 28 chr13 20082688 20083629 -100200683 - L1_Mur3 LINE L1 -2860 3020 2056 1 738 468 0 0 0 chr13 20083629 20083681 -100200631 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 738 2256 270 55 28 chr13 20083681 20083738 -100200574 - L1_Mur3 LINE L1 -3825 2055 1997 1 738 336 197 33 0 chr13 20083793 20083854 -100200458 + B3 SINE B2 126 188 -28 1 738 336 64 0 0 chr13 20083874 20083921 -100200391 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 738 898 109 72 14 chr13 20083921 20084049 -100200263 - B1_Mus1 SINE Alu -11 137 1 1 738 1674 220 32 0 chr13 20084061 20084470 -100199842 - L1_Mur3 LINE L1 -3969 1911 1490 1 738 282 148 0 0 chr13 20084510 20084564 -100199748 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 1 738 766 216 0 0 chr13 20084580 20084714 -100199598 - B1_Mur4 SINE Alu -16 134 1 1 738 279 0 0 0 chr13 20084909 20084940 -100199372 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 738 1265 7 7 0 chr13 20086545 20086690 -100197622 - B1_Mm SINE Alu 0 147 2 1 738 210 37 0 0 chr13 20087826 20087853 -100196459 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 1 738 1122 62 14 20 chr13 20087857 20088005 -100196307 - B1_Mm SINE Alu 0 147 1 1 738 323 250 22 130 chr13 20088836 20088974 -100195338 - RMER5 LTR ERV1 -411 123 1 1 738 39 22 0 0 chr13 20088994 20089040 -100195272 + AT_rich Low_complexity Low_complexity 1 46 0 1 738 1052 166 43 106 chr13 20089591 20089847 -100194465 + ORR1C1 LTR MaLR 1 240 -138 1 738 306 0 0 0 chr13 20089922 20089956 -100194356 + (TTGG)n Simple_repeat Simple_repeat 3 36 0 1 738 836 86 86 0 chr13 20089956 20090096 -100194216 - BC1_Mm scRNA scRNA 0 152 1 1 738 724 245 110 16 chr13 20091992 20092183 -100192129 - B3 SINE B2 -6 210 2 1 738 1497 246 100 11 chr13 20093229 20093677 -100190635 + Lx5 LINE L1 6559 7046 -4 1 738 29 0 0 0 chr13 20093679 20093708 -100190604 + AT_rich Low_complexity Low_complexity 1 29 0 1 738 27 29 0 0 chr13 20094607 20094641 -100189671 + AT_rich Low_complexity Low_complexity 1 34 0 1 738 26 0 0 0 chr13 20094745 20094771 -100189541 + AT_rich Low_complexity Low_complexity 1 26 0 1 738 1773 212 57 30 chr13 20095031 20095434 -100188878 - MTD LTR MaLR -5 414 1 1 738 732 115 0 0 chr13 20095806 20095928 -100188384 + (TC)n Simple_repeat Simple_repeat 1 122 0 1 738 432 0 0 0 chr13 20095928 20095976 -100188336 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 738 231 125 0 0 chr13 20096240 20096280 -100188032 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 738 1100 84 7 0 chr13 20096804 20096946 -100187366 + B1_Mus1 SINE Alu 5 147 -1 1 738 576 349 32 0 chr13 20097650 20097962 -100186350 + MER52-int LTR ERV1 5721 6042 -1049 1 738 4093 111 17 2 chr13 20098425 20099021 -100185291 - Lx LINE L1 0 6654 6050 1 738 1489 183 104 52 chr13 20100081 20100268 -100184044 + ORR1C2 LTR MaLR 1 188 -196 1 738 836 89 8 0 chr13 20100268 20100391 -100183921 + (TC)n Simple_repeat Simple_repeat 1 124 0 1 738 1489 183 104 52 chr13 20100391 20100567 -100183745 + ORR1C2 LTR MaLR 189 383 -1 1 738 791 209 299 14 chr13 20101913 20102127 -100182185 + ORR1B2 LTR MaLR 1 275 -92 1 738 1494 229 29 20 chr13 20102121 20102468 -100181844 - RLTR28B LTR ERVL -129 352 3 1 738 267 31 0 0 chr13 20103214 20103246 -100181066 + (T)n Simple_repeat Simple_repeat 1 32 0 1 738 248 70 0 23 chr13 20103984 20104028 -100180284 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 738 1707 264 42 32 chr13 20104756 20105285 -100179027 - RMER5 LTR ERV1 0 534 1 1 738 1232 126 5 0 chr13 20105415 20105605 -100178707 + B2_Mm1t SINE B2 1 191 -2 1 738 369 293 155 10 chr13 20106615 20106808 -100177504 - Lx8 LINE L1 -31 7442 7222 1 738 638 194 49 35 chr13 20106809 20106953 -100177359 + B1_Mm SINE Alu 1 146 -1 1 738 955 308 169 36 chr13 20106990 20107854 -100176458 - Lx8 LINE L1 -236 7237 6259 1 738 198 71 0 0 chr13 20107855 20107883 -100176429 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 738 1075 167 5 10 chr13 20107885 20107918 -100176394 - B2_Mm2 SINE B2 -1 194 162 1 738 279 0 0 0 chr13 20107918 20107949 -100176363 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1 738 1075 167 5 10 chr13 20107949 20108109 -100176203 - B2_Mm2 SINE B2 -34 161 2 1 738 2200 88 13 22 chr13 20108275 20108587 -100175725 - RLTR27 LTR ERVK 0 309 1 1 738 727 307 74 28 chr13 20108906 20109191 -100175121 - MLT1A0 LTR MaLR -67 298 1 1 738 500 294 86 64 chr13 20109377 20109657 -100174655 - MLT2B3 LTR ERVL -261 293 8 1 738 372 361 109 40 chr13 20111295 20111543 -100172769 + LTR16A LTR ERVL 159 423 -28 1 738 1129 281 38 14 chr13 20112442 20112810 -100171502 - MTEa LTR MaLR -2 377 1 1 738 1539 141 67 24 chr13 20113699 20113997 -100170315 - RLTR11A2 LTR ERVK 0 527 217 1 738 324 0 0 0 chr13 20114043 20114079 -100170233 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 738 396 72 43 0 chr13 20114145 20114214 -100170098 + (CATA)n Simple_repeat Simple_repeat 1 72 0 1 738 950 84 7 0 chr13 20114338 20114480 -100169832 + (TC)n Simple_repeat Simple_repeat 2 144 0 1 738 2259 188 66 2 chr13 20114480 20114907 -100169405 + MT2A LTR ERVL 2 455 -78 1 738 554 263 58 0 chr13 20115025 20115162 -100169150 - B1F1 SINE Alu 0 149 5 1 738 1181 147 11 0 chr13 20116008 20116185 -100168127 + B2_Mm1t SINE B2 1 179 -14 1 738 367 87 39 3 chr13 20116217 20116318 -100167994 + B2_Mm2 SINE B2 47 187 -8 1 738 1347 92 21 11 chr13 20117473 20117659 -100166653 + B2_Mm2 SINE B2 2 189 -6 1 738 251 297 443 13 chr13 20117674 20117824 -100166488 + ID_B1 SINE B4 6 220 -4 1 738 226 115 0 37 chr13 20117833 20117887 -100166425 + (ATG)n Simple_repeat Simple_repeat 2 53 0 1 738 479 118 0 12 chr13 20117892 20117978 -100166334 + (GGA)n Simple_repeat Simple_repeat 3 87 0 1 738 207 88 0 0 chr13 20118168 20118202 -100166110 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 738 1173 63 0 40 chr13 20118202 20118351 -100165961 - B1_Mus2 SINE Alu 0 147 5 1 738 286 248 19 67 chr13 20118970 20119074 -100165238 + MTE2b LTR MaLR 272 370 -9 1 738 24 0 0 0 chr13 20120167 20120191 -100164121 + AT_rich Low_complexity Low_complexity 1 24 0 1 738 248 280 177 66 chr13 20120228 20120454 -100163858 + L1MB3 LINE L1 5919 6181 -2 1 738 525 32 0 0 chr13 20120487 20120550 -100163762 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1 738 638 25 0 12 chr13 20120557 20120638 -100163674 + (TTCC)n Simple_repeat Simple_repeat 2 81 0 1 738 22 56 0 0 chr13 20120786 20120822 -100163490 + AT_rich Low_complexity Low_complexity 1 36 0 1 738 490 216 263 23 chr13 20120825 20120996 -100163316 - B3 SINE B2 -4 212 1 1 738 732 190 6 16 chr13 20121677 20121771 -100162541 + polypyrimidine Low_complexity Low_complexity 87 180 0 1 738 1125 128 0 0 chr13 20121771 20121951 -100162361 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 738 732 190 6 16 chr13 20121951 20122038 -100162274 + polypyrimidine Low_complexity Low_complexity 2 86 0 1 738 21 0 0 0 chr13 20122552 20122573 -100161739 + AT_rich Low_complexity Low_complexity 1 21 0 1 738 245 317 64 90 chr13 20124450 20124606 -100159706 + ORR1E LTR MaLR 54 205 -154 1 738 254 333 64 23 chr13 20124961 20125133 -100159179 + MIRb SINE MIR 70 248 -20 1 738 1683 37 11 0 chr13 20125245 20125433 -100158879 + B2_Mm1a SINE B2 1 190 -3 1 738 290 290 19 9 chr13 20126695 20126803 -100157509 + (TA)n Simple_repeat Simple_repeat 1 109 0 1 738 387 127 0 0 chr13 20126803 20126866 -100157446 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 738 1223 122 136 5 chr13 20126997 20127195 -100157117 + URR1A DNA MER1_type 3 226 0 1 738 2184 126 3 10 chr13 20128326 20128639 -100155673 + RLTR10E LTR ERVK 1 311 0 1 738 1002 185 0 21 chr13 20128905 20129093 -100155219 + MTD LTR MaLR 1 184 -235 1 738 437 299 39 88 chr13 20129153 20129358 -100154954 - B3A SINE B2 -3 195 1 1 738 269 294 15 0 chr13 20129363 20129431 -100154881 - ID4_ SINE ID 0 83 15 1 738 395 321 77 112 chr13 20132253 20132425 -100151887 - MER44A DNA MER2_type -32 307 131 1 738 1839 10 0 0 chr13 20132425 20132617 -100151695 + B2_Mm1a SINE B2 2 193 0 1 738 395 321 77 112 chr13 20132617 20132640 -100151672 - MER44A DNA MER2_type -209 130 118 1 738 895 159 20 20 chr13 20132640 20132788 -100151524 + B1_Mur3 SINE Alu 1 148 -1 1 738 407 309 5 8 chr13 20132788 20132903 -100151409 - MER44D DNA MER2_type -222 117 7 1 738 1819 150 59 52 chr13 20133858 20134265 -100150047 - RMER17C LTR ERVK 0 410 1 1 738 370 226 231 17 chr13 20134286 20134403 -100149909 - B1_Mur1 SINE Alu -7 142 1 1 738 230 259 47 12 chr13 20134454 20134540 -100149772 - L1M5 LINE L1 -222 5902 5814 1 738 244 323 104 31 chr13 20134746 20134909 -100149403 - MIR SINE MIR -28 234 60 1 738 256 306 102 84 chr13 20135622 20135847 -100148465 - MTEa LTR MaLR -97 282 54 1 738 1447 100 16 0 chr13 20135862 20136052 -100148260 + B2_Mm2 SINE B2 2 194 -1 1 738 2304 165 60 69 chr13 20136655 20137105 -100147207 - RLTR41 LTR ERV1 0 446 1 1 738 862 289 5 5 chr13 20138565 20138770 -100145542 + B3 SINE B2 2 206 -10 1 738 479 335 99 16 chr13 20138816 20139068 -100145244 + B4A SINE B4 1 273 -19 2 738 342 0 0 0 chr13 20139074 20139112 -100145200 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 738 328 278 44 107 chr13 20141431 20141769 -100142543 + RMER17C LTR ERVK 3 319 -91 2 738 23 0 0 0 chr13 20142722 20142745 -100141567 + AT_rich Low_complexity Low_complexity 1 23 0 2 738 1251 120 0 6 chr13 20142852 20143028 -100141284 - B2_Mm2 SINE B2 -19 176 2 2 738 207 0 0 0 chr13 20143342 20143365 -100140947 + (CCTA)n Simple_repeat Simple_repeat 2 24 0 2 738 297 0 0 0 chr13 20145144 20145177 -100139135 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 738 312 27 0 0 chr13 20145177 20145213 -100139099 + (GA)n Simple_repeat Simple_repeat 1 37 0 2 738 24 53 0 0 chr13 20145510 20145548 -100138764 + AT_rich Low_complexity Low_complexity 1 38 0 2 738 730 266 30 48 chr13 20145678 20145844 -100138468 + RSINE1 SINE B4 3 165 0 2 738 1136 295 56 48 chr13 20145877 20146743 -100137569 + L1MB5 LINE L1 5016 5888 -286 2 738 489 34 0 0 chr13 20147599 20147658 -100136654 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 738 428 264 6 182 chr13 20147659 20147835 -100136477 - RSINE1 SINE B4 -18 147 3 2 738 196 53 26 26 chr13 20148025 20148064 -100136248 + (TTA)n Simple_repeat Simple_repeat 3 41 0 2 738 1120 276 21 7 chr13 20148320 20148601 -100135711 + B4A SINE B4 2 286 -6 2 738 210 71 0 0 chr13 20148704 20148732 -100135580 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 738 1208 282 86 20 chr13 20149357 20149752 -100134560 + MTE-int LTR MaLR 4 424 -1156 2 738 1115 313 70 37 chr13 20149722 20150153 -100134159 + MTE-int LTR MaLR 531 975 -605 2 738 192 125 0 0 chr13 20150229 20150261 -100134051 + (CCTA)n Simple_repeat Simple_repeat 2 33 0 2 738 698 245 28 0 chr13 20150339 20150482 -100133830 + B1_Mur2 SINE Alu 2 148 -1 2 738 564 89 0 0 chr13 20150660 20150739 -100133573 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 738 407 36 36 0 chr13 20151516 20151572 -100132740 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 2 738 21 0 0 0 chr13 20151604 20151625 -100132687 + AT_rich Low_complexity Low_complexity 1 21 0 2 738 307 253 24 37 chr13 20152036 20152118 -100132194 + ID2 SINE ID 3 83 0 2 738 232 315 13 40 chr13 20152441 20152517 -100131795 + L2a LINE L2 3340 3413 -13 2 738 391 274 17 60 chr13 20153323 20153501 -100130811 - MIR SINE MIR -56 206 38 2 738 180 0 0 0 chr13 20153535 20153555 -100130757 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 738 762 189 184 53 chr13 20153557 20153747 -100130565 - B3 SINE B2 0 216 2 2 738 390 281 145 46 chr13 20155405 20155756 -100128556 + L1M6 LINE L1 1623 2008 -4488 2 738 184 54 53 26 chr13 20157164 20157202 -100127110 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 2 738 197 328 135 56 chr13 20157446 20157801 -100126511 - L2 LINE L2 -896 2523 2141 2 738 224 250 16 22 chr13 20158094 20158158 -100126154 - PB1D7 SINE Alu -2 118 56 2 738 193 295 37 37 chr13 20158384 20158465 -100125847 - MIRb SINE MIR -68 200 120 2 738 1462 202 72 87 chr13 20159207 20159597 -100124715 + ORR1C2 LTR MaLR 1 384 0 2 738 1708 221 45 18 chr13 20159813 20160210 -100124102 - MTD LTR MaLR -2 417 10 2 738 821 279 16 0 chr13 20160596 20160786 -100123526 - B3 SINE B2 -10 206 14 2 738 257 256 167 0 chr13 20162200 20162290 -100122022 - MTEb LTR MaLR 0 379 275 2 738 1406 266 23 8 chr13 20163023 20163409 -100120903 - Lx9 LINE L1 -164 7480 7089 2 738 300 259 90 30 chr13 20163428 20163595 -100120717 + MIRb SINE MIR 17 193 -75 2 738 22 0 0 0 chr13 20163720 20163742 -100120570 + AT_rich Low_complexity Low_complexity 1 22 0 2 738 28 29 0 0 chr13 20164248 20164283 -100120029 + AT_rich Low_complexity Low_complexity 1 35 0 2 738 384 311 19 0 chr13 20164824 20164930 -100119382 - PB1 SINE Alu -16 111 4 2 738 237 286 72 31 chr13 20165132 20165327 -100118985 - L1MD1 LINE L1 -259 5983 5781 2 738 463 279 65 100 chr13 20165402 20165764 -100118548 + L1ME1 LINE L1 5629 5991 -188 2 738 249 114 0 0 chr13 20166484 20166519 -100117793 + tRNA-Trp-TGG tRNA tRNA 3 37 -38 2 738 1625 218 94 5 chr13 20166579 20166952 -100117360 - MTD LTR MaLR -2 417 12 2 738 690 247 17 0 chr13 20167655 20167829 -100116483 + B3 SINE B2 40 216 0 2 738 202 95 23 23 chr13 20169027 20169070 -100115242 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 738 883 244 136 16 chr13 20169094 20169352 -100114960 - B4A SINE B4 -2 290 2 2 738 1339 263 26 17 chr13 20169998 20170343 -100113969 + Lx6 LINE L1 7112 7459 -1 2 738 1119 138 26 31 chr13 20170343 20170538 -100113774 + B2_Mm2 SINE B2 2 195 0 2 738 261 0 0 0 chr13 20170538 20170567 -100113745 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2 738 1451 176 154 19 chr13 20171206 20171568 -100112744 - MTD LTR MaLR -14 405 7 2 738 440 192 98 16 chr13 20173309 20173431 -100110881 - MTD LTR MaLR 0 419 288 2 738 478 228 9 0 chr13 20173473 20173587 -100110725 - MTD LTR MaLR -304 115 1 2 738 356 282 57 0 chr13 20174263 20174387 -100109925 + Lx7 LINE L1 701 831 -6897 2 738 628 271 133 42 chr13 20174790 20175024 -100109288 + Lx7 LINE L1 923 1197 -6531 2 738 1910 164 107 3 chr13 20175024 20175379 -100108933 - ORR1B1 LTR MaLR 0 394 3 2 738 4150 231 24 33 chr13 20175379 20175771 -100108541 + Lx7 LINE L1 1198 1563 -4317 2 738 1197 48 0 20 chr13 20175771 20175909 -100108403 + B1_Mus2 SINE Alu 1 138 -9 2 738 228 35 0 0 chr13 20175909 20175938 -100108374 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 738 1197 48 0 20 chr13 20175938 20175949 -100108363 + B1_Mus2 SINE Alu 139 147 0 2 738 4150 230 22 32 chr13 20175949 20176706 -100107606 + Lx7 LINE L1 1564 2332 -3548 2 738 10064 207 50 65 chr13 20176694 20177823 -100106489 + Lx7 LINE L1 3245 4408 -1472 2 738 376 277 35 9 chr13 20177823 20177936 -100106376 + B1_Mm SINE Alu 30 145 -2 2 738 10064 207 50 65 chr13 20177936 20178709 -100105603 + Lx7 LINE L1 4409 5207 -673 2 738 351 0 0 0 chr13 20178709 20178748 -100105564 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 738 198 103 0 0 chr13 20178748 20178777 -100105535 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 2 738 10064 265 66 24 chr13 20178777 20180935 -100103377 + Lx7 LINE L1 5208 7502 -194 2 738 1016 39 0 8 chr13 20180939 20181069 -100103243 + (GAAA)n Simple_repeat Simple_repeat 1 129 0 2 738 585 133 0 0 chr13 20181070 20181168 -100103144 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 2 738 257 231 44 0 chr13 20181172 20181263 -100103049 + Lx7 LINE L1 7602 7696 0 2 738 29 47 0 0 chr13 20182746 20182789 -100101523 + GC_rich Low_complexity Low_complexity 1 43 0 2 738 378 0 0 0 chr13 20183423 20183465 -100100847 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 738 21 57 0 0 chr13 20183781 20183816 -100100496 + AT_rich Low_complexity Low_complexity 1 35 0 2 738 235 245 0 36 chr13 20184085 20184140 -100100172 + polypyrimidine Low_complexity Low_complexity 3 55 0 2 738 300 296 41 0 chr13 20184514 20184612 -100099700 + L2a LINE L2 3030 3131 -295 2 739 221 243 57 0 chr13 20185872 20185942 -100098370 + B1F1 SINE Alu 37 110 -39 2 739 705 106 0 0 chr13 20187680 20187784 -100096528 + (TTTC)n Simple_repeat Simple_repeat 1 104 0 2 739 459 63 0 0 chr13 20187946 20188009 -100096303 + (CCAA)n Simple_repeat Simple_repeat 2 64 0 2 739 211 206 174 14 chr13 20188134 20188203 -100096109 + B4 SINE B4 21 100 -192 2 739 25 31 0 0 chr13 20188358 20188390 -100095922 + AT_rich Low_complexity Low_complexity 1 32 0 2 739 413 304 73 17 chr13 20189002 20189179 -100095133 - MER20 DNA MER1_type -7 212 26 2 739 426 69 0 0 chr13 20190522 20190580 -100093732 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 739 27 0 0 0 chr13 20190861 20190888 -100093424 + AT_rich Low_complexity Low_complexity 1 27 0 2 739 180 0 0 0 chr13 20191594 20191614 -100092698 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 2 739 211 272 57 81 chr13 20191804 20191928 -100092384 + MIRb SINE MIR 38 158 -110 2 739 227 106 61 0 chr13 20193025 20193091 -100091221 + (TATAA)n Simple_repeat Simple_repeat 5 74 0 2 739 1284 71 83 0 chr13 20194121 20194290 -100090022 + B2_Mm2 SINE B2 3 185 -10 2 739 676 194 13 34 chr13 20194476 20194625 -100089687 - B1_Mus2 SINE Alu -1 146 1 2 739 210 37 0 0 chr13 20194753 20194780 -100089532 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 739 939 261 0 9 chr13 20194869 20195082 -100089230 - B3 SINE B2 -5 211 1 2 739 783 279 75 6 chr13 20197603 20197921 -100086391 - ERVL-B4-int LTR ERVL -3484 2277 1820 2 739 411 98 0 0 chr13 20198877 20198938 -100085374 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 739 927 0 0 0 chr13 20200619 20200722 -100083590 + (TTC)n Simple_repeat Simple_repeat 1 103 0 2 739 23 0 0 0 chr13 20201733 20201756 -100082556 + AT_rich Low_complexity Low_complexity 1 23 0 2 739 406 243 29 10 chr13 20202532 20202636 -100081676 + B3 SINE B2 104 209 -7 2 739 1385 177 115 32 chr13 20202674 20203013 -100081299 - ORR1C1 LTR MaLR -4 374 8 2 739 261 281 63 95 chr13 20203306 20203495 -100080817 - MTEa LTR MaLR 0 379 197 2 739 369 0 0 0 chr13 20203794 20203835 -100080477 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 739 273 273 69 0 chr13 20205120 20205226 -100079086 + MLT1A LTR MaLR 215 343 -47 2 739 222 245 284 0 chr13 20206829 20206931 -100077381 + MIRb SINE MIR 132 262 -6 2 739 2153 107 88 6 chr13 20207835 20208175 -100076137 - RLTR9A LTR ERVK 0 368 1 2 739 314 311 43 118 chr13 20209279 20209626 -100074686 - MER57D LTR ERV1 0 411 91 2 739 871 290 4 52 chr13 20210000 20210251 -100074061 + Lx9 LINE L1 6936 7174 -470 2 739 1078 189 42 46 chr13 20210258 20210474 -100073838 - B3 SINE B2 -1 215 1 2 739 235 347 31 0 chr13 20210836 20210934 -100073378 + L1M5 LINE L1 5491 5591 -533 2 739 299 284 162 81 chr13 20211694 20211978 -100072334 + MLT1A0 LTR MaLR 55 361 -4 2 739 247 280 157 46 chr13 20213045 20213262 -100071050 - MLT1B LTR MaLR -145 245 5 2 739 22 0 0 0 chr13 20214593 20214615 -100069697 + AT_rich Low_complexity Low_complexity 1 22 0 2 739 393 264 143 40 chr13 20214717 20214843 -100069469 - B1_Mur2 SINE Alu -8 141 3 3 739 469 59 0 0 chr13 20215562 20215630 -100068682 - L1_Mus2 LINE L1 0 6566 6499 3 739 207 0 0 0 chr13 20215924 20215947 -100068365 + (TA)n Simple_repeat Simple_repeat 2 24 0 3 739 287 374 103 25 chr13 20217348 20217669 -100066643 - MLT1F LTR MaLR -5 543 198 3 739 1055 104 0 94 chr13 20217737 20217939 -100066373 - RLTRETN_Mm LTR ERVK -139 183 1 3 739 34 0 0 0 chr13 20218510 20218544 -100065768 + AT_rich Low_complexity Low_complexity 1 34 0 3 739 1120 130 68 0 chr13 20218553 20218730 -100065582 + B2_Mm2 SINE B2 2 190 -5 3 739 755 72 9 0 chr13 20218888 20218999 -100065313 + (TCCA)n Simple_repeat Simple_repeat 2 113 0 3 739 468 173 0 0 chr13 20219000 20219075 -100065237 + B3 SINE B2 19 93 -123 3 739 294 29 0 0 chr13 20219119 20219154 -100065158 + (CAAT)n Simple_repeat Simple_repeat 2 36 0 3 739 578 158 88 0 chr13 20219935 20220049 -100064263 - B1_Mur1 SINE Alu -19 130 7 3 739 232 290 0 16 chr13 20220929 20220992 -100063320 + GA-rich Low_complexity Low_complexity 1 62 0 3 739 556 266 82 15 chr13 20221154 20221349 -100062963 - L1MC3 LINE L1 -1892 5893 5686 3 739 246 196 0 0 chr13 20222436 20222487 -100061825 - MER20 DNA MER1_type 0 219 169 3 739 226 371 19 0 chr13 20222775 20222880 -100061432 - MLT2B3 LTR ERVL -442 112 6 3 739 405 0 0 0 chr13 20223028 20223073 -100061239 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 739 288 0 0 0 chr13 20223209 20223241 -100061071 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3 739 1120 58 0 0 chr13 20223246 20223385 -100060927 - B1_Mus2 SINE Alu -7 140 2 3 739 271 237 137 86 chr13 20223456 20223771 -100060541 + ORR1E LTR MaLR 45 368 -2 3 739 267 103 0 0 chr13 20224125 20224164 -100060148 + (CAT)n Simple_repeat Simple_repeat 1 39 0 3 739 746 258 35 35 chr13 20224481 20224678 -100059634 - B3 SINE B2 -19 197 1 3 739 237 33 0 0 chr13 20225331 20225361 -100058951 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 739 314 245 91 30 chr13 20226753 20226928 -100057384 - L1MC1 LINE L1 -254 6079 5887 3 739 2876 57 216 14 chr13 20226932 20227358 -100056954 - RLTR1B LTR ERV1 0 512 1 3 739 450 0 0 0 chr13 20228192 20228242 -100056070 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 739 1082 223 64 84 chr13 20229397 20229848 -100054464 + RMER10A LTR ERVL 1 442 0 3 739 432 0 0 0 chr13 20230165 20230213 -100054099 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 739 207 0 0 0 chr13 20230537 20230560 -100053752 + (CAGG)n Simple_repeat Simple_repeat 3 25 0 3 739 306 0 0 0 chr13 20231701 20231735 -100052577 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 739 426 20 0 0 chr13 20231736 20231787 -100052525 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 739 895 285 35 3 chr13 20231789 20232078 -100052234 - MER2 DNA MER2_type -31 314 17 3 739 785 263 38 0 chr13 20232951 20233137 -100051175 - B3A SINE B2 -5 193 1 3 739 299 323 39 53 chr13 20233391 20233597 -100050715 + ORR1E LTR MaLR 3 205 -154 3 739 1142 153 32 0 chr13 20234053 20234242 -100050070 + B2_Mm2 SINE B2 1 195 0 3 739 656 98 10 0 chr13 20234242 20234344 -100049968 + (GA)n Simple_repeat Simple_repeat 2 104 0 3 739 222 316 67 17 chr13 20234567 20234686 -100049626 - MIRb SINE MIR -29 239 115 3 739 333 0 0 0 chr13 20235691 20235728 -100048584 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 739 270 0 0 0 chr13 20235904 20235934 -100048378 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 3 739 223 324 0 39 chr13 20235937 20236014 -100048298 - RSINE1 SINE B4 -87 78 5 3 739 680 247 0 33 chr13 20236021 20236172 -100048140 - B1_Mus1 SINE Alu 0 148 3 3 739 1085 98 0 0 chr13 20237073 20237237 -100047075 + B2_Mm2 SINE B2 1 164 -31 3 739 1125 78 0 0 chr13 20237239 20237509 -100046803 + (GA)n Simple_repeat Simple_repeat 1 270 0 3 739 451 324 76 38 chr13 20238964 20239387 -100044925 + L1MC4 LINE L1 7374 7812 -230 3 739 2459 142 49 10 chr13 20240162 20240567 -100043745 + MTC LTR MaLR 1 421 0 3 739 383 133 10 48 chr13 20244369 20244472 -100039840 + CT-rich Low_complexity Low_complexity 3 101 0 3 739 307 250 60 84 chr13 20244530 20244696 -100039616 + MLT1C LTR MaLR 3 164 -303 3 739 287 355 40 0 chr13 20244762 20244914 -100039398 + MLT1C LTR MaLR 303 460 -7 3 739 539 314 36 43 chr13 20245062 20245315 -100038997 - B4A SINE B4 0 292 42 3 739 1106 72 0 7 chr13 20245464 20245604 -100038708 + B1_Mm SINE Alu 1 139 -8 3 739 232 48 48 0 chr13 20245604 20245646 -100038666 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 739 243 146 0 0 chr13 20245995 20246036 -100038276 + (T)n Simple_repeat Simple_repeat 1 41 0 3 739 1298 260 37 32 chr13 20246421 20246798 -100037514 - MTEa LTR MaLR 0 379 1 3 739 261 285 164 14 chr13 20246942 20247088 -100037224 - MLT1A1 LTR MaLR -217 191 24 3 739 244 302 29 143 chr13 20247681 20247890 -100036422 - MER82 DNA MER2_type -56 597 413 3 739 1982 163 46 0 chr13 20247895 20248264 -100036048 - MTC LTR MaLR 0 421 36 3 739 479 359 67 14 chr13 20248546 20248829 -100035483 - MT2A LTR ERVL 0 533 236 3 739 1556 149 47 62 chr13 20248894 20249215 -100035097 - ORR1A4 LTR MaLR -13 316 1 3 739 365 282 14 51 chr13 20249215 20249345 -100034967 - MTEa LTR MaLR -254 125 1 3 739 1370 78 15 25 chr13 20250320 20250517 -100033795 + B2_Mm2 SINE B2 1 195 0 3 739 784 164 8 0 chr13 20250662 20250790 -100033522 + B3 SINE B2 2 130 -86 3 739 25 0 0 0 chr13 20250802 20250827 -100033485 + AT_rich Low_complexity Low_complexity 1 25 0 3 739 451 241 94 7 chr13 20250935 20250958 -100033354 - B4 SINE B4 -64 228 122 3 739 787 83 0 0 chr13 20250958 20251066 -100033246 - B1_Mus1 SINE Alu -40 108 1 3 739 188 86 0 28 chr13 20251494 20251530 -100032782 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 3 739 222 315 146 19 chr13 20253352 20253558 -100030754 - MIRb SINE MIR -6 262 23 3 739 460 157 244 0 chr13 20254801 20254916 -100029396 - URR1B DNA MER1_type 0 225 83 3 739 240 197 14 40 chr13 20254854 20254928 -100029384 + CYRA11_Mm Unknown Y-chromosome 254 325 -292 3 739 341 310 26 0 chr13 20255000 20255116 -100029196 - L1M5 LINE L1 -570 5603 5485 3 739 21 0 0 0 chr13 20256862 20256883 -100027429 + AT_rich Low_complexity Low_complexity 1 21 0 3 739 387 0 0 0 chr13 20257678 20257721 -100026591 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 739 190 296 0 0 chr13 20257888 20257942 -100026370 - L2 LINE L2 -978 2441 2388 3 739 384 22 0 0 chr13 20258019 20258064 -100026248 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 739 745 215 198 0 chr13 20258482 20258659 -100025653 + B3 SINE B2 5 216 0 3 739 189 94 0 0 chr13 20258665 20258697 -100025615 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 3 739 316 307 20 0 chr13 20258743 20258844 -100025468 - L1ME1 LINE L1 -196 5983 5881 3 739 361 282 42 8 chr13 20258850 20258968 -100025344 - MER58B DNA MER1_type -4 337 216 3 739 681 74 0 0 chr13 20260003 20260098 -100024214 + B1_Mus1 SINE Alu 28 122 -26 3 739 611 26 0 13 chr13 20260098 20260176 -100024136 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 3 739 470 328 146 33 chr13 20260792 20261271 -100023041 - L4 LINE RTE -1090 939 407 3 739 1020 89 0 32 chr13 20261292 20261478 -100022834 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 3 739 785 103 8 0 chr13 20261582 20261708 -100022604 + (GGAGA)n Simple_repeat Simple_repeat 2 128 0 3 739 200 279 0 0 chr13 20262140 20262201 -100022111 - MIR SINE MIR -92 170 110 3 739 363 304 65 0 chr13 20262587 20262725 -100021587 + MLT1B LTR MaLR 198 344 -46 3 739 1147 95 0 0 chr13 20262736 20262884 -100021428 + B1_Mus1 SINE Alu 1 148 0 3 739 255 93 0 0 chr13 20262884 20262927 -100021385 + (A)n Simple_repeat Simple_repeat 1 43 0 3 739 288 154 0 0 chr13 20262985 20263037 -100021275 + GA-rich Low_complexity Low_complexity 3 54 0 3 739 1180 79 77 27 chr13 20263225 20263408 -100020904 - B2_Mm2 SINE B2 -1 194 3 3 739 303 28 0 0 chr13 20263763 20263799 -100020513 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 739 3052 59 10 20 chr13 20264258 20264658 -100019654 - MTA_Mm LTR MaLR 0 396 1 3 739 952 216 221 14 chr13 20265442 20265783 -100018529 + MTD LTR MaLR 3 396 -23 3 739 1329 180 187 26 chr13 20267263 20267442 -100016870 + RMER10B LTR ERVL 1 209 -189 3 739 246 32 0 0 chr13 20267442 20267473 -100016839 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 3 739 1329 180 187 26 chr13 20267473 20267636 -100016676 + RMER10B LTR ERVL 210 397 -1 3 739 3784 11 121 0 chr13 20268237 20268677 -100015635 - MT2_Mm LTR ERVL 0 493 1 3 739 360 0 0 0 chr13 20269453 20269493 -100014819 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 739 1183 41 0 14 chr13 20269896 20270043 -100014269 - B1_Mm SINE Alu -2 145 1 3 739 354 224 26 0 chr13 20270464 20270540 -100013772 + ID_B1 SINE B4 130 207 -17 3 739 241 333 11 0 chr13 20270893 20270980 -100013332 - MLT1B LTR MaLR -63 327 240 3 739 284 291 78 13 chr13 20271001 20271154 -100013158 - MLT1B LTR MaLR -197 193 31 3 739 298 235 28 45 chr13 20272443 20272562 -100011750 - ORR1D2 LTR MaLR -207 152 28 3 739 192 77 0 0 chr13 20273725 20273751 -100010561 + (TTC)n Simple_repeat Simple_repeat 2 27 0 3 739 1078 103 0 0 chr13 20273755 20273901 -100010411 - B1_Mm SINE Alu -1 146 1 3 739 304 361 59 32 chr13 20275081 20275301 -100009011 + L2a LINE L2 2934 3159 -267 3 739 185 238 150 0 chr13 20275426 20275506 -100008806 + L2a LINE L2 3282 3373 -2 3 739 397 340 47 50 chr13 20275871 20276193 -100008119 + L1MC LINE L1 5406 5726 -2156 4 739 237 178 0 0 chr13 20276939 20276984 -100007328 + A-rich Low_complexity Low_complexity 1 45 0 4 739 310 235 35 0 chr13 20278659 20278744 -100005568 + MER5A1 DNA MER1_type 59 146 -20 4 739 362 294 128 42 chr13 20278996 20279440 -100004872 - L1MC4a LINE L1 -8 7874 7398 4 739 330 269 101 0 chr13 20280755 20280874 -100003438 - MLT1A1 LTR MaLR -11 397 267 4 739 2118 186 69 65 chr13 20282044 20282583 -100001729 - RMER15 LTR ERVL 0 575 35 4 739 406 276 62 25 chr13 20284647 20284807 -99999505 - MER20 DNA MER1_type -31 188 23 4 739 576 0 0 0 chr13 20285355 20285419 -99998893 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 739 354 23 0 0 chr13 20285834 20285877 -99998435 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 739 201 74 0 0 chr13 20288038 20288065 -99996247 + (T)n Simple_repeat Simple_repeat 1 27 0 4 739 996 48 6 184 chr13 20288068 20288247 -99996065 - B1_Mus1 SINE Alu 0 148 2 4 739 180 0 0 0 chr13 20288585 20288605 -99995707 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 739 1278 105 16 21 chr13 20288722 20288916 -99995396 + B2_Mm2 SINE B2 2 194 -1 4 739 1731 148 239 26 chr13 20289563 20289910 -99994402 + MTC LTR MaLR 1 421 0 4 739 729 151 164 0 chr13 20289969 20290121 -99994191 - B2_Mm2 SINE B2 -14 181 5 4 739 21 0 0 0 chr13 20291930 20291951 -99992361 + AT_rich Low_complexity Low_complexity 1 21 0 4 739 347 235 0 0 chr13 20293278 20293346 -99990966 + ID4 SINE ID 5 72 -11 4 739 960 249 146 20 chr13 20293881 20294237 -99990075 + MTD LTR MaLR 5 405 -14 4 739 1239 138 16 5 chr13 20294968 20295158 -99989154 - B2_Mm2 SINE B2 -3 192 1 4 739 329 316 21 0 chr13 20297621 20297716 -99986596 - PB1D10 SINE Alu -7 110 14 4 739 402 299 73 15 chr13 20297924 20298128 -99986184 + L1MA6 LINE L1 5862 6077 -223 4 739 733 87 252 0 chr13 20298198 20298313 -99985999 + B1_Mus1 SINE Alu 1 144 -4 4 739 494 329 29 11 chr13 20298330 20298585 -99985727 + L1MA5 LINE L1 6036 6294 -6 4 739 510 340 15 35 chr13 20299420 20299621 -99984691 + B3A SINE B2 1 197 -1 4 739 725 154 8 24 chr13 20301255 20301381 -99982931 + B1_Mur2 SINE Alu 25 148 -1 4 739 249 83 0 0 chr13 20301446 20301482 -99982830 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 4 739 379 291 39 45 chr13 20301529 20301684 -99982628 - RSINE1 SINE B4 -4 161 8 4 739 306 111 0 0 chr13 20303197 20303204 -99981108 + (GA)n Simple_repeat Simple_repeat 1 7 0 4 739 441 0 0 0 chr13 20303204 20303253 -99981059 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 739 306 111 0 0 chr13 20303253 20303299 -99981013 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 739 402 121 0 0 chr13 20304532 20304598 -99979714 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 739 206 338 93 22 chr13 20304701 20304840 -99979472 - MIRb SINE MIR -84 184 36 4 739 310 263 0 13 chr13 20306523 20306600 -99977712 + PB1D7 SINE Alu 43 118 -2 4 739 459 262 66 0 chr13 20307038 20307160 -99977152 + B1_Mus2 SINE Alu 5 134 -13 4 739 718 244 19 42 chr13 20307764 20307978 -99976334 - ORR1D1 LTR MaLR 0 374 166 4 739 871 179 0 0 chr13 20308052 20308203 -99976109 - ORR1D1 LTR MaLR -211 163 13 4 739 942 32 0 0 chr13 20308854 20308977 -99975335 + B1_Mm SINE Alu 25 147 0 4 739 411 56 0 0 chr13 20308979 20309033 -99975279 + (GAAA)n Simple_repeat Simple_repeat 2 55 0 4 739 473 175 30 12 chr13 20309247 20309415 -99974897 + (CA)n Simple_repeat Simple_repeat 2 172 0 4 739 267 54 0 0 chr13 20310383 20310420 -99973892 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 739 257 271 62 119 chr13 20310883 20311059 -99973253 - MLT1G LTR MaLR -1 590 425 4 739 375 282 0 0 chr13 20311119 20311197 -99973115 + B3 SINE B2 122 199 -17 4 739 182 192 19 0 chr13 20311201 20311253 -99973059 + (CATA)n Simple_repeat Simple_repeat 3 55 0 4 739 1065 83 0 33 chr13 20311420 20311570 -99972742 + B1_Mus1 SINE Alu 2 146 -2 4 739 245 370 25 16 chr13 20311595 20311716 -99972596 - MLT1G LTR MaLR -401 190 69 4 739 837 232 24 0 chr13 20311982 20312150 -99972162 + B3 SINE B2 1 172 -44 4 739 510 103 0 0 chr13 20312151 20312229 -99972083 + (CATA)n Simple_repeat Simple_repeat 2 79 0 4 739 283 287 22 33 chr13 20312230 20312320 -99971992 + B3 SINE B2 122 210 -6 4 739 401 282 48 0 chr13 20312688 20312812 -99971500 + B1_Mur1 SINE Alu 2 131 -18 4 739 369 0 0 0 chr13 20312812 20312853 -99971459 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 739 458 250 27 18 chr13 20312859 20312969 -99971343 - RSINE1 SINE B4 -11 154 44 4 739 1147 44 0 0 chr13 20314385 20314520 -99969792 + B1_Mus2 SINE Alu 1 135 -12 4 739 240 198 70 0 chr13 20315326 20315412 -99968900 + CT-rich Low_complexity Low_complexity 4 95 0 4 739 1174 89 0 22 chr13 20315425 20315609 -99968703 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 4 739 378 0 0 0 chr13 20315609 20315651 -99968661 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 739 432 173 18 18 chr13 20315651 20315763 -99968549 - Lx3A LINE L1 0 6981 6870 4 739 900 83 114 0 chr13 20315788 20315920 -99968392 - B1_Mus2 SINE Alu 0 147 1 4 740 827 268 34 0 chr13 20316213 20316422 -99967890 + B3 SINE B2 1 216 0 4 740 22 35 0 0 chr13 20316422 20316451 -99967861 + AT_rich Low_complexity Low_complexity 1 29 0 4 740 1180 248 70 6 chr13 20318532 20318873 -99965439 - L1MA6 LINE L1 -475 5825 5463 4 740 613 216 97 0 chr13 20318880 20319014 -99965298 + B1_Mur3 SINE Alu 3 149 0 4 740 491 157 0 19 chr13 20319044 20319148 -99965164 + GA-rich Low_complexity Low_complexity 3 104 0 4 740 186 267 34 34 chr13 20320447 20320536 -99963776 - L2b LINE L2 -362 3057 2969 4 740 236 273 91 0 chr13 20320957 20321034 -99963278 + MER58D DNA MER1_type 302 385 -1 4 740 450 267 96 0 chr13 20321531 20321677 -99962635 + MER2 DNA MER2_type 102 261 -84 4 740 406 279 0 21 chr13 20321703 20321846 -99962466 - MTD LTR MaLR -275 144 5 4 740 259 254 0 0 chr13 20321850 20321913 -99962399 + B2_Mm2 SINE B2 2 64 -131 4 740 534 268 0 0 chr13 20321898 20322010 -99962302 + B3 SINE B2 99 210 -6 4 740 286 254 25 91 chr13 20326012 20326133 -99958179 - L1MA6 LINE L1 -6 6294 6182 4 740 354 80 0 0 chr13 20326146 20326196 -99958116 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 740 694 324 28 17 chr13 20326247 20326536 -99957776 - B4 SINE B4 0 292 1 4 740 881 292 116 74 chr13 20326547 20327210 -99957102 - L1MA6 LINE L1 -111 6189 5491 4 740 1309 74 5 78 chr13 20327210 20327415 -99956897 - B2_Mm1t SINE B2 -2 191 2 4 740 333 0 0 0 chr13 20327419 20327456 -99956856 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 740 590 250 36 0 chr13 20327456 20327596 -99956716 - B1_Mm SINE Alu -2 145 1 4 740 881 292 116 74 chr13 20327596 20327695 -99956617 - L1MA6 LINE L1 -810 5490 5390 4 740 308 259 120 20 chr13 20327899 20328049 -99956263 - MER110A LTR ERV1 -242 226 62 4 740 1131 134 0 16 chr13 20328311 20328795 -99955517 + (CA)n Simple_repeat Simple_repeat 1 476 0 4 740 1222 235 35 78 chr13 20329022 20329396 -99954916 - ORR1E LTR MaLR 0 359 2 4 740 218 32 32 0 chr13 20330383 20330414 -99953898 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 740 7736 93 2 20 chr13 20331033 20332422 -99951890 - L1_Mus3 LINE L1 -8 6630 5259 4 740 237 33 0 0 chr13 20332974 20333004 -99951308 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 4 740 798 29 0 9 chr13 20333004 20333109 -99951203 - B1_Mus2 SINE Alu -1 146 43 4 740 554 245 57 14 chr13 20335320 20335461 -99948851 - B1_Mur2 SINE Alu -1 148 2 4 740 1904 215 16 87 chr13 20337099 20337649 -99946663 - RLTR18B LTR ERVK -1 511 1 4 740 23 33 0 0 chr13 20339010 20339040 -99945272 + AT_rich Low_complexity Low_complexity 1 30 0 4 740 227 313 43 43 chr13 20340530 20340670 -99943642 + MIR SINE MIR 79 218 -44 4 740 1236 96 0 0 chr13 20342507 20342811 -99941501 + (CA)n Simple_repeat Simple_repeat 1 304 0 4 740 494 267 135 14 chr13 20344582 20344730 -99939582 + B3A SINE B2 7 172 -26 4 740 423 0 0 0 chr13 20344731 20344778 -99939534 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 740 804 234 138 55 chr13 20344807 20345096 -99939216 - MTE2b LTR MaLR -43 336 24 4 740 498 57 0 0 chr13 20345391 20345461 -99938851 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 4 740 979 274 67 56 chr13 20345690 20346065 -99938247 - MLT1B LTR MaLR -11 379 1 4 740 396 0 0 0 chr13 20347315 20347359 -99936953 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 740 485 311 66 12 chr13 20347958 20348124 -99936188 + B3A SINE B2 1 175 -23 4 740 392 0 0 20 chr13 20348129 20348178 -99936134 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 740 351 0 0 0 chr13 20348802 20348841 -99935471 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 740 467 56 14 0 chr13 20348841 20348912 -99935400 + (GA)n Simple_repeat Simple_repeat 2 73 0 4 740 963 214 81 14 chr13 20348918 20349202 -99935110 - RMER5 LTR ERV1 -104 430 128 4 740 668 236 158 43 chr13 20349294 20349662 -99934650 - LTR37A LTR ERV1 0 426 17 4 740 311 352 105 14 chr13 20350274 20350493 -99933819 - L1MC4 LINE L1 -1001 7041 6803 4 740 23 0 0 0 chr13 20350591 20350614 -99933698 + AT_rich Low_complexity Low_complexity 1 23 0 4 740 1133 94 100 0 chr13 20352045 20352215 -99932097 - B2_Mm2 SINE B2 -7 188 2 4 740 234 0 0 0 chr13 20352441 20352467 -99931845 + (A)n Simple_repeat Simple_repeat 1 26 0 5 740 228 35 0 0 chr13 20352949 20352978 -99931334 + (A)n Simple_repeat Simple_repeat 1 29 0 5 740 361 340 50 0 chr13 20354088 20354229 -99930083 - Lx8 LINE L1 -109 7364 7217 5 740 434 17 35 0 chr13 20354631 20354689 -99929623 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 5 740 195 42 0 0 chr13 20354811 20354835 -99929477 + (TAG)n Simple_repeat Simple_repeat 2 25 0 5 740 839 250 15 30 chr13 20355117 20355315 -99928997 + B3 SINE B2 1 195 -21 5 740 458 295 61 29 chr13 20355541 20355820 -99928492 + L1MEg LINE L1 2049 2336 -4766 5 740 201 237 0 0 chr13 20355826 20355864 -99928448 + polypurine Low_complexity Low_complexity 1 38 0 5 740 592 99 32 32 chr13 20355864 20355989 -99928323 + GA-rich Low_complexity Low_complexity 4 128 0 5 740 342 311 52 132 chr13 20355989 20356374 -99927938 + L1MEg LINE L1 2327 2680 -4422 5 740 361 286 182 35 chr13 20356446 20357380 -99926932 + L1MEg LINE L1 3002 3913 -3093 5 740 3574 249 65 88 chr13 20357407 20358679 -99925633 + Lx7 LINE L1 6059 7301 -395 5 740 257 218 78 39 chr13 20358778 20358907 -99925405 + Lx7 LINE L1 7563 7696 0 5 740 242 347 0 8 chr13 20359089 20359208 -99925104 + L1MEg LINE L1 4167 4284 -2722 5 740 222 128 0 0 chr13 20359617 20359656 -99924656 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 740 522 330 9 48 chr13 20359696 20359906 -99924406 - B4 SINE B4 -79 213 12 5 740 295 328 32 11 chr13 20360165 20360353 -99923959 + L1MEg LINE L1 4464 4655 -2351 5 740 1193 68 45 0 chr13 20360519 20360695 -99923617 + B2_Mm2 SINE B2 5 188 -7 5 740 217 100 0 39 chr13 20360726 20360760 -99923552 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 740 207 0 0 0 chr13 20360760 20360783 -99923529 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 740 217 100 0 39 chr13 20360783 20360800 -99923512 + (TA)n Simple_repeat Simple_repeat 2 17 0 5 740 300 303 100 14 chr13 20360891 20361287 -99923025 + L1MEg LINE L1 4988 5416 -1590 5 740 405 287 119 53 chr13 20361342 20361493 -99922819 + RSINE1 SINE B4 3 163 -2 5 740 357 117 0 0 chr13 20361496 20361556 -99922756 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 740 1515 202 64 5 chr13 20364854 20365197 -99919115 - RLTR18B LTR ERVK -93 523 214 5 740 265 146 0 20 chr13 20365198 20365247 -99919065 - RLTR18B LTR ERVK -464 48 1 5 740 700 286 0 27 chr13 20365382 20365565 -99918747 - B3A SINE B2 -20 178 1 5 740 372 303 48 48 chr13 20365589 20365818 -99918494 - RLTR14 LTR ERV1 0 382 154 5 740 535 217 132 60 chr13 20366770 20366937 -99917375 - ORR1D1 LTR MaLR -194 180 2 5 740 939 18 0 0 chr13 20367525 20367634 -99916678 + (TCC)n Simple_repeat Simple_repeat 3 111 0 5 740 186 174 0 0 chr13 20367653 20367699 -99916613 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 740 1997 227 128 4 chr13 20368585 20369093 -99915219 - Lx5 LINE L1 0 7050 6480 5 740 1075 235 30 79 chr13 20369247 20369458 -99914854 - B4 SINE B4 -1 291 88 5 740 1284 97 0 6 chr13 20369458 20369634 -99914678 - B2_Mm2 SINE B2 -19 176 2 5 740 1075 235 30 79 chr13 20369634 20369727 -99914585 - B4 SINE B4 -205 87 2 5 740 841 185 13 0 chr13 20370674 20370831 -99913481 + B3 SINE B2 1 159 -57 5 740 924 151 0 16 chr13 20370832 20371014 -99913298 + GA-rich Low_complexity Low_complexity 1 179 0 5 740 324 0 0 0 chr13 20372142 20372178 -99912134 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 740 237 227 84 74 chr13 20373189 20373284 -99911028 - Lx9 LINE L1 -1700 5944 5849 5 740 219 279 106 18 chr13 20375436 20375549 -99908763 - MIR SINE MIR -102 166 42 5 740 818 251 174 12 chr13 20377602 20377935 -99906377 - MTD LTR MaLR -23 396 18 5 740 230 328 0 111 chr13 20379174 20379318 -99904994 - MER74A LTR ERVL -7 551 424 5 740 250 309 18 0 chr13 20379446 20379556 -99904756 - MER74A LTR ERVL -241 317 206 5 740 339 282 39 80 chr13 20380811 20381071 -99903241 - L1MB3 LINE L1 -75 6108 5857 5 740 1386 216 147 10 chr13 20381079 20381495 -99902817 - Lx9 LINE L1 -1 7643 7171 5 740 1195 43 0 0 chr13 20381541 20381682 -99902630 + B1_Mus1 SINE Alu 2 142 -6 5 740 600 14 0 0 chr13 20382846 20382915 -99901397 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 740 30 0 0 0 chr13 20384223 20384253 -99900059 + AT_rich Low_complexity Low_complexity 1 30 0 5 740 345 47 0 0 chr13 20384943 20384986 -99899326 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 740 441 54 0 0 chr13 20385363 20385419 -99898893 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 740 5142 48 14 0 chr13 20385596 20386221 -99898091 - L1_Mus1 LINE L1 0 6567 5934 5 740 24 0 0 0 chr13 20386851 20386875 -99897437 + AT_rich Low_complexity Low_complexity 1 24 0 5 740 652 351 87 32 chr13 20387843 20388340 -99895972 - MER82 DNA MER2_type -1 652 129 5 740 375 284 51 57 chr13 20388423 20388580 -99895732 + RSINE1 SINE B4 10 165 0 5 740 489 226 56 35 chr13 20389393 20389535 -99894777 - B1_Mur1 SINE Alu 0 149 5 5 740 21 36 0 0 chr13 20390999 20391027 -99893285 + AT_rich Low_complexity Low_complexity 1 28 0 5 740 1159 62 0 20 chr13 20391067 20391215 -99893097 + B1_Mus2 SINE Alu 3 147 0 5 740 22 0 0 0 chr13 20391223 20391245 -99893067 + AT_rich Low_complexity Low_complexity 1 22 0 5 740 24 32 0 0 chr13 20391299 20391330 -99892982 + AT_rich Low_complexity Low_complexity 1 31 0 5 740 1191 107 0 0 chr13 20391751 20391929 -99892383 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 5 740 189 0 0 0 chr13 20391930 20391951 -99892361 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 5 740 189 319 117 28 chr13 20392124 20392269 -99892043 + MIR SINE MIR 44 201 -61 5 740 614 281 28 141 chr13 20392358 20392677 -99891635 - B4 SINE B4 -9 283 1 5 740 246 314 45 62 chr13 20393184 20393296 -99891016 - PB1D10 SINE Alu -7 110 1 5 740 214 244 44 133 chr13 20393296 20393329 -99890983 - ID SINE ID -150 74 50 5 740 229 366 117 7 chr13 20394400 20394554 -99889758 - LTR86A2 LTR ERVL -47 461 291 5 740 198 200 17 52 chr13 20395904 20395962 -99888350 + L2c LINE L2 3028 3083 -304 5 740 716 77 0 9 chr13 20396193 20396298 -99888014 + (TA)n Simple_repeat Simple_repeat 1 104 0 5 740 229 348 87 35 chr13 20396898 20397127 -99887185 + MLT1A LTR MaLR 124 364 -10 5 740 377 0 0 88 chr13 20397249 20397329 -99886983 + (TTTTTG)n Simple_repeat Simple_repeat 2 74 0 5 740 289 309 8 8 chr13 20398188 20398312 -99886000 + (TG)n Simple_repeat Simple_repeat 1 124 0 5 740 558 231 0 8 chr13 20399269 20399387 -99884925 - PB1D9 SINE Alu -2 118 2 5 740 26 74 0 0 chr13 20399744 20399798 -99884514 + AT_rich Low_complexity Low_complexity 1 54 0 5 740 670 253 44 18 chr13 20399887 20400101 -99884211 - B3A SINE B2 -15 201 1 5 740 1221 78 0 0 chr13 20400233 20400399 -99883913 + (CA)n Simple_repeat Simple_repeat 2 167 0 5 740 260 243 14 0 chr13 20401624 20401694 -99882618 + BC1_Mm scRNA scRNA 1 71 -81 5 740 384 296 35 6 chr13 20402038 20402211 -99882101 + L1MEa LINE L1 432 609 -5461 5 740 258 266 0 12 chr13 20402374 20402454 -99881858 + L1MEa LINE L1 811 889 -5181 5 740 486 146 0 0 chr13 20403225 20403307 -99881005 + (TCC)n Simple_repeat Simple_repeat 3 84 0 5 740 360 199 113 42 chr13 20404484 20404626 -99879686 - B3A SINE B2 -2 214 63 5 740 666 230 90 4 chr13 20406184 20406410 -99877902 - L1MD3 LINE L1 -262 7733 7518 5 740 316 313 177 50 chr13 20406824 20407168 -99877144 - MLT2B1 LTR ERVL -68 499 8 5 740 257 336 66 16 chr13 20407405 20407526 -99876786 + MLT1A1 LTR MaLR 270 396 -12 5 740 543 284 6 55 chr13 20408919 20409083 -99875229 - B3A SINE B2 -41 157 2 5 740 855 152 0 29 chr13 20409479 20409764 -99874548 + (CA)n Simple_repeat Simple_repeat 1 276 0 5 740 366 23 0 0 chr13 20409783 20409826 -99874486 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 740 1068 75 7 26 chr13 20411263 20411414 -99872898 - B1_Mus1 SINE Alu 0 148 1 5 740 623 257 97 20 chr13 20414091 20414120 -99870192 - B3 SINE B2 -5 211 183 5 740 333 0 0 0 chr13 20414120 20414157 -99870155 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 740 623 257 97 20 chr13 20414157 20414322 -99869990 - B3 SINE B2 -34 182 2 5 740 221 0 35 0 chr13 20414414 20414443 -99869869 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 740 1114 67 0 0 chr13 20415971 20416105 -99868207 - B1_Mm SINE Alu -12 135 2 5 740 1674 20 10 5 chr13 20418541 20418745 -99865567 - L1Md_F3 LINE L1 -1 6583 6379 5 740 765 302 143 15 chr13 20420397 20420740 -99863572 - MTD LTR MaLR 0 419 33 5 740 534 347 0 0 chr13 20420754 20420901 -99863411 - Lx8 LINE L1 -300 7173 7027 5 740 204 225 0 0 chr13 20421526 20421566 -99862746 + CT-rich Low_complexity Low_complexity 2 41 0 5 740 279 211 28 0 chr13 20422599 20422670 -99861642 - MER58B DNA MER1_type -127 214 142 5 740 342 0 0 0 chr13 20422728 20422766 -99861546 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 5 740 204 40 0 0 chr13 20422836 20422861 -99861451 + (CACCC)n Simple_repeat Simple_repeat 3 27 0 5 740 204 94 37 19 chr13 20423700 20423754 -99860558 + (TTTTTG)n Simple_repeat Simple_repeat 4 58 0 5 740 1076 57 50 0 chr13 20423756 20423896 -99860416 - B1_Mus2 SINE Alu 0 147 1 5 740 482 274 61 7 chr13 20423950 20424097 -99860215 - RSINE1 SINE B4 -9 156 2 5 740 716 257 5 74 chr13 20424149 20424351 -99859961 - B3A SINE B2 -10 188 1 5 740 3399 16 31 3 chr13 20425371 20425756 -99858556 - MTA_Mm LTR MaLR 0 396 1 5 740 477 0 0 0 chr13 20426224 20426277 -99858035 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 740 667 142 0 0 chr13 20426277 20426383 -99857929 - ORR1B1 LTR MaLR -15 379 274 5 740 1389 292 142 6 chr13 20426384 20426900 -99857412 - Lx8 LINE L1 -802 6671 6086 5 740 186 297 47 0 chr13 20429105 20429169 -99855143 + MIR SINE MIR 63 129 -133 5 740 515 212 100 32 chr13 20429342 20429532 -99854780 + MER2 DNA MER2_type 25 227 -118 5 740 563 176 8 0 chr13 20429536 20429661 -99854651 + CT-rich Low_complexity Low_complexity 1 126 0 5 740 348 272 0 0 chr13 20429913 20429994 -99854318 - ID4 SINE ID -1 82 2 5 740 336 298 41 8 chr13 20430003 20430125 -99854187 - B1F SINE Alu 0 149 24 5 740 328 307 21 35 chr13 20430790 20430935 -99853377 + B3A SINE B2 1 143 -55 6 740 180 0 0 0 chr13 20431029 20431049 -99853263 + (A)n Simple_repeat Simple_repeat 1 20 0 6 740 1194 206 72 12 chr13 20431669 20431919 -99852393 - Lx6 LINE L1 -7 7453 7189 6 740 1449 179 3 71 chr13 20431938 20432203 -99852109 - Lx6 LINE L1 -598 6862 6614 6 740 4513 101 15 85 chr13 20432203 20433007 -99851305 + RMER17A LTR ERVK 1 748 -3 6 740 1449 179 3 71 chr13 20433007 20433035 -99851277 - Lx6 LINE L1 -847 6613 6589 6 740 819 222 79 64 chr13 20433149 20433414 -99850898 + L1M2 LINE L1 4083 4351 -1792 6 740 7951 70 18 4 chr13 20435487 20437118 -99847194 - L1Md_F2 LINE L1 -2 6580 4962 6 740 414 196 151 38 chr13 20437184 20437290 -99847022 + PB1D9 SINE Alu 3 120 0 6 740 489 115 0 0 chr13 20437338 20437416 -99846896 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 740 2819 3 0 0 chr13 20437726 20438035 -99846277 + L1Md_T LINE L1 6274 6582 0 6 740 30 0 0 0 chr13 20438438 20438468 -99845844 + AT_rich Low_complexity Low_complexity 1 30 0 6 740 351 0 0 0 chr13 20438651 20438690 -99845622 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 740 1308 209 157 6 chr13 20439236 20439394 -99844918 - ORR1C1 LTR MaLR -8 370 182 6 740 1167 94 0 0 chr13 20439394 20439574 -99844738 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 740 1308 209 157 6 chr13 20439574 20439733 -99844579 - ORR1C1 LTR MaLR -197 181 6 6 740 1184 274 65 6 chr13 20439751 20440089 -99844223 - MTE2b LTR MaLR 0 379 22 6 740 193 75 50 0 chr13 20441433 20441473 -99842839 + (TTTTTG)n Simple_repeat Simple_repeat 1 42 0 6 740 816 197 7 0 chr13 20441474 20441616 -99842696 - B1_Mur4 SINE Alu -7 143 1 6 740 414 0 0 0 chr13 20442404 20442450 -99841862 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 740 315 0 0 0 chr13 20442450 20442484 -99841828 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 740 229 218 0 0 chr13 20443933 20443988 -99840324 - MIRc SINE MIR -133 135 81 6 740 360 0 0 0 chr13 20444122 20444162 -99840150 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 740 253 309 11 11 chr13 20444198 20444293 -99840019 + Lx9 LINE L1 7225 7319 -325 6 740 1635 267 93 22 chr13 20444298 20444849 -99839463 - Lx9 LINE L1 -469 7175 6586 6 740 1047 224 11 38 chr13 20444874 20445138 -99839174 - L1_Rod LINE L1 -89 5758 5502 6 740 207 116 70 0 chr13 20445244 20445287 -99839025 + T-rich Low_complexity Low_complexity 1 46 0 6 740 234 0 0 0 chr13 20445642 20445668 -99838644 + (T)n Simple_repeat Simple_repeat 1 26 0 6 740 27 0 0 0 chr13 20446161 20446188 -99838124 + AT_rich Low_complexity Low_complexity 1 27 0 6 741 1002 278 65 16 chr13 20447632 20448001 -99836311 - L1MC LINE L1 -1923 4223 3837 6 741 307 258 22 22 chr13 20448151 20448242 -99836070 - L1MD1 LINE L1 -222 6020 5930 6 741 783 283 118 47 chr13 20448479 20449053 -99835259 - L1MC LINE L1 -2475 3671 3057 6 741 297 324 42 59 chr13 20449209 20449498 -99834814 + L2 LINE L2 2603 2886 -533 6 741 583 298 76 9 chr13 20449531 20449741 -99834571 - RMER15 LTR ERVL -15 560 337 6 741 515 279 24 37 chr13 20449937 20450101 -99834211 - MLT1B LTR MaLR 0 390 229 6 741 827 269 70 59 chr13 20450100 20450455 -99833857 - MT2A LTR ERVL -172 361 3 6 741 266 0 29 0 chr13 20452257 20452291 -99832021 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 741 334 166 0 21 chr13 20452417 20452492 -99831820 + ETnERV3-int LTR ERVK 5246 5300 -508 6 741 1816 149 25 85 chr13 20452492 20452894 -99831418 - RLTR1B LTR ERV1 0 512 135 6 741 263 164 24 110 chr13 20452980 20453062 -99831250 + ETnERV3-int LTR ERVK 5997 6071 -1173 6 741 1702 130 0 0 chr13 20453082 20453328 -99830984 + ETnERV3-int LTR ERVK 5535 5780 -28 6 741 5567 69 4 9 chr13 20453339 20454151 -99830161 + RLTR13C2 LTR ERVK 1 983 0 6 741 1154 263 25 71 chr13 20454336 20454700 -99829612 + Lx7 LINE L1 6132 6478 -1218 6 741 1018 135 6 6 chr13 20455750 20455929 -99828383 + (TTC)n Simple_repeat Simple_repeat 1 179 0 6 741 517 247 61 56 chr13 20455984 20456164 -99828148 + B2_Mm2 SINE B2 7 187 -8 6 741 531 0 0 0 chr13 20456166 20456225 -99828087 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 741 318 209 147 42 chr13 20456340 20456435 -99827877 + MER5A1 DNA MER1_type 34 138 -28 6 741 460 278 137 16 chr13 20456764 20456947 -99827365 - L1MB5 LINE L1 0 6174 5970 6 741 1127 68 0 13 chr13 20457058 20457208 -99827104 - B1_Mus1 SINE Alu 0 148 1 6 741 393 353 27 5 chr13 20457393 20457578 -99826734 + MER5A DNA MER1_type 1 189 0 6 741 491 220 9 27 chr13 20460156 20460268 -99824044 - PB1D10 SINE Alu -5 112 3 6 741 241 244 93 47 chr13 20460575 20460661 -99823651 + B3A SINE B2 36 125 -73 6 741 308 232 48 12 chr13 20460642 20460725 -99823587 + B3A SINE B2 40 125 -73 6 741 297 256 46 11 chr13 20460702 20460789 -99823523 + B3A SINE B2 36 125 -73 6 741 500 283 49 34 chr13 20460766 20461002 -99823310 + B3A SINE B2 15 198 0 6 741 1215 228 181 25 chr13 20461036 20461150 -99823162 + MTC LTR MaLR 1 119 -302 6 741 720 184 42 14 chr13 20461150 20461293 -99823019 - B1_Mus1 SINE Alu -1 147 1 6 741 1215 228 181 25 chr13 20461293 20461542 -99822770 + MTC LTR MaLR 120 421 0 6 741 271 263 20 40 chr13 20463108 20463207 -99821105 - MLT1A1 LTR MaLR -4 404 308 6 741 1584 57 0 0 chr13 20465425 20465617 -99818695 + B2_Mm1a SINE B2 2 193 0 6 741 240 111 0 0 chr13 20468943 20468979 -99815333 + (T)n Simple_repeat Simple_repeat 1 36 0 6 741 588 322 78 0 chr13 20469103 20469373 -99814939 + MER2 DNA MER2_type 2 292 -53 6 741 2447 118 83 20 chr13 20470357 20470800 -99813512 - RLTR31B_Mm LTR ERVK -86 471 1 6 741 236 76 0 96 chr13 20473245 20473318 -99810994 + T-rich Low_complexity Low_complexity 1 66 0 6 741 369 136 0 0 chr13 20473518 20473584 -99810728 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 741 507 85 0 0 chr13 20473733 20473815 -99810497 + (TG)n Simple_repeat Simple_repeat 2 83 0 6 741 554 286 83 16 chr13 20473878 20474070 -99810242 - B3 SINE B2 0 216 12 6 741 754 275 12 17 chr13 20474068 20474308 -99810004 - B4 SINE B4 -53 239 1 6 741 273 299 10 10 chr13 20474994 20475092 -99809220 - MLT1A1 LTR MaLR -17 391 294 6 741 288 138 0 0 chr13 20475594 20475659 -99808653 + (TC)n Simple_repeat Simple_repeat 2 66 0 6 741 207 0 0 0 chr13 20475659 20475682 -99808630 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 741 2252 143 39 129 chr13 20476521 20477009 -99807303 - RLTR41 LTR ERV1 0 446 3 6 741 2062 153 69 57 chr13 20477826 20478263 -99806049 - RMER10A LTR ERVL 0 442 1 6 741 194 385 0 0 chr13 20478934 20478999 -99805313 + MER5B DNA MER1_type 3 67 -111 6 741 336 83 0 0 chr13 20479461 20479509 -99804803 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 6 741 192 77 0 0 chr13 20479706 20479732 -99804580 + (TTGG)n Simple_repeat Simple_repeat 1 26 0 6 741 375 23 0 0 chr13 20480146 20480190 -99804122 + (CATA)n Simple_repeat Simple_repeat 2 45 0 6 741 231 256 107 24 chr13 20480408 20480492 -99803820 - ID_B1 SINE B4 -131 93 3 6 741 371 314 31 37 chr13 20480730 20480892 -99803420 + MER5C1 DNA MER1_type 88 248 -15 6 741 411 98 0 0 chr13 20481113 20481174 -99803138 + (GGGA)n Simple_repeat Simple_repeat 1 61 0 6 741 259 265 134 13 chr13 20482121 20482270 -99802042 - L1M5 LINE L1 -320 5804 5638 6 741 231 203 0 0 chr13 20483847 20483906 -99800406 + (TGG)n Simple_repeat Simple_repeat 3 61 0 6 741 510 129 0 0 chr13 20484061 20484146 -99800166 + (CA)n Simple_repeat Simple_repeat 1 85 0 6 741 3756 204 93 50 chr13 20486928 20487736 -99796576 + RMER1A Other Other 66 910 -120 6 741 510 31 0 0 chr13 20487736 20487800 -99796512 + (TG)n Simple_repeat Simple_repeat 2 65 0 6 741 3756 204 93 50 chr13 20487800 20487911 -99796401 + RMER1A Other Other 911 1024 -6 6 741 380 20 20 0 chr13 20488629 20488678 -99795634 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 741 251 276 0 0 chr13 20493924 20493982 -99790330 + MER63C DNA AcHobo 313 370 -560 6 741 30 45 0 0 chr13 20495276 20495320 -99788992 + AT_rich Low_complexity Low_complexity 1 44 0 6 741 396 0 0 0 chr13 20495326 20495370 -99788942 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 741 362 213 0 87 chr13 20497078 20497181 -99787131 - MLT1A1 LTR MaLR -4 404 311 6 741 631 109 18 9 chr13 20497238 20497349 -99786963 + (GGGA)n Simple_repeat Simple_repeat 1 112 0 6 741 210 150 0 0 chr13 20498180 20498220 -99786092 + (T)n Simple_repeat Simple_repeat 1 40 0 6 741 24 0 0 0 chr13 20501495 20501519 -99782793 + AT_rich Low_complexity Low_complexity 1 24 0 1 741 355 309 49 62 chr13 20501875 20502037 -99782275 + ORR1E LTR MaLR 14 173 -186 2 741 305 310 0 0 chr13 20502128 20502199 -99782113 - ID4_ SINE ID -4 79 9 3 741 22 0 0 0 chr13 20502891 20502913 -99781399 + AT_rich Low_complexity Low_complexity 1 22 0 4 741 221 188 21 0 chr13 20503018 20503066 -99781246 + (CTTAT)n Simple_repeat Simple_repeat 1 49 0 5 741 2666 101 68 41 chr13 20503840 20504253 -99780059 - Lx LINE L1 -2 6652 6229 6 741 215 311 28 46 chr13 20505328 20505436 -99778876 + L3 LINE CR1 3881 3986 -503 7 741 522 0 0 0 chr13 20505555 20505613 -99778699 + (TG)n Simple_repeat Simple_repeat 2 59 0 8 741 438 79 0 0 chr13 20507966 20508029 -99776283 + (TG)n Simple_repeat Simple_repeat 2 64 0 9 741 21 36 0 0 chr13 20508080 20508108 -99776204 + AT_rich Low_complexity Low_complexity 1 28 0 1 741 256 63 73 73 chr13 20511053 20511121 -99773191 - B2_Mm1a SINE B2 -7 186 119 1 741 1218 82 18 0 chr13 20511116 20511287 -99773025 - B2_Mm1t SINE B2 -14 179 6 1 741 231 281 118 40 chr13 20511781 20511933 -99772379 - L2 LINE L2 -467 2952 2789 1 741 594 0 0 0 chr13 20513985 20514051 -99770261 + (GAAA)n Simple_repeat Simple_repeat 4 69 0 1 741 207 108 0 26 chr13 20515004 20515042 -99769270 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 1 741 254 345 21 21 chr13 20515098 20515243 -99769069 + MamRep564 Unknown Unknown 95 239 -118 1 741 22 0 0 0 chr13 20515438 20515460 -99768852 + AT_rich Low_complexity Low_complexity 1 22 0 1 741 941 252 59 0 chr13 20515460 20515662 -99768650 - B3 SINE B2 -2 214 1 1 741 388 292 70 64 chr13 20517902 20518074 -99766238 + MLT1A LTR MaLR 41 213 -161 1 741 2038 194 92 20 chr13 20519568 20520014 -99764298 + RMER13A LTR ERVK 1 478 -382 2 741 3573 248 116 46 chr13 20520959 20522061 -99762251 - Lx6 LINE L1 -8 7452 6274 2 741 754 325 82 39 chr13 20522062 20522417 -99761895 - MLT1B LTR MaLR -8 382 13 2 741 405 0 0 0 chr13 20523221 20523266 -99761046 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 741 288 0 0 0 chr13 20523266 20523297 -99761015 + (GA)n Simple_repeat Simple_repeat 2 33 0 2 741 902 268 124 4 chr13 20523628 20523886 -99760426 + B4A SINE B4 4 292 0 2 741 490 226 0 11 chr13 20523912 20524087 -99760225 + (CA)n Simple_repeat Simple_repeat 2 174 0 2 741 805 301 81 4 chr13 20524139 20524399 -99759913 + Tigger7 DNA MER2_type 86 365 -2126 2 741 281 330 29 29 chr13 20524442 20524545 -99759767 + Tigger7 DNA MER2_type 2381 2483 -8 2 741 729 34 0 0 chr13 20525842 20525930 -99758382 + (GGA)n Simple_repeat Simple_repeat 1 88 0 2 741 431 238 0 106 chr13 20526450 20526563 -99757749 + RSINE1 SINE B4 65 165 0 2 741 318 187 0 0 chr13 20526568 20526659 -99757653 + (CA)n Simple_repeat Simple_repeat 2 92 0 3 741 1645 68 79 6 chr13 20526979 20527234 -99757078 - L1_Mus2 LINE L1 -49 6605 6281 3 741 497 218 180 31 chr13 20527257 20527385 -99756927 + B1_Mur2 SINE Alu 3 149 0 3 741 209 268 113 0 chr13 20527407 20527478 -99756834 + MIR SINE MIR 157 235 -27 3 741 387 195 0 42 chr13 20527588 20527666 -99756646 - B1F SINE Alu -7 142 75 3 741 319 286 26 0 chr13 20527667 20527744 -99756568 - B1F SINE Alu -24 125 47 3 741 1402 87 5 16 chr13 20527871 20528059 -99756253 - B2_Mm2 SINE B2 -8 187 2 3 741 738 282 104 112 chr13 20528162 20528545 -99755767 - MTD LTR MaLR -39 380 1 3 741 437 122 14 0 chr13 20529431 20529505 -99754807 + (TTC)n Simple_repeat Simple_repeat 2 76 0 3 741 24 0 0 0 chr13 20530551 20530575 -99753737 + AT_rich Low_complexity Low_complexity 1 24 0 3 741 254 157 78 0 chr13 20530768 20530819 -99753493 - B3A SINE B2 -141 57 3 4 741 261 177 38 0 chr13 20531009 20531088 -99753224 + (TA)n Simple_repeat Simple_repeat 2 83 0 4 741 363 258 142 141 chr13 20531139 20531573 -99752739 - MLT2B1 LTR ERVL -62 458 1 4 741 25 0 0 0 chr13 20532004 20532029 -99752283 + AT_rich Low_complexity Low_complexity 1 25 0 4 741 186 103 0 0 chr13 20532029 20532058 -99752254 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 741 218 32 32 0 chr13 20532805 20532836 -99751476 + (TGGGGG)n Simple_repeat Simple_repeat 6 37 0 4 741 639 39 0 0 chr13 20533043 20533121 -99751191 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 4 741 242 160 20 0 chr13 20533916 20533966 -99750346 + GA-rich Low_complexity Low_complexity 1 51 0 4 741 1220 218 142 33 chr13 20535379 20535716 -99748596 + MTD LTR MaLR 46 419 0 4 741 297 0 0 0 chr13 20535775 20535808 -99748504 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 741 243 0 0 0 chr13 20537127 20537154 -99747158 + (T)n Simple_repeat Simple_repeat 1 27 0 5 741 1507 200 149 6 chr13 20537525 20537722 -99746590 + ORR1D1 LTR MaLR 5 226 -148 5 741 312 27 0 0 chr13 20537722 20537759 -99746553 + (CCTG)n Simple_repeat Simple_repeat 4 40 0 5 741 1507 200 149 6 chr13 20537759 20537883 -99746429 + ORR1D1 LTR MaLR 227 372 -2 5 741 682 261 20 0 chr13 20539819 20539972 -99744340 + B3 SINE B2 1 156 -60 5 741 615 130 0 0 chr13 20539973 20540073 -99744239 + (TCCC)n Simple_repeat Simple_repeat 3 102 0 5 741 222 269 59 15 chr13 20540348 20540416 -99743896 + BC1_Mm scRNA scRNA 1 71 -81 5 741 243 297 16 0 chr13 20540355 20540419 -99743893 + tRNA-Ala-GCY_ tRNA tRNA 4 68 -7 5 741 557 110 0 9 chr13 20541929 20542039 -99742273 + (TC)n Simple_repeat Simple_repeat 2 110 0 5 741 539 256 0 25 chr13 20542059 20542179 -99742133 - RSINE1 SINE B4 -44 121 5 5 741 201 279 38 0 chr13 20543244 20543323 -99740989 + (TAGA)n Simple_repeat Simple_repeat 2 83 0 5 741 804 306 115 61 chr13 20543327 20543804 -99740508 - MLT1D LTR MaLR 0 505 3 6 741 1532 178 50 36 chr13 20547227 20547673 -99736639 - RMER17C LTR ERVK -519 439 19 6 741 938 286 103 84 chr13 20549302 20549476 -99734836 - ORR1D2 LTR MaLR -4 366 167 6 741 2256 239 25 23 chr13 20549476 20549535 -99734777 - MT2A LTR ERVL -1 532 466 6 741 540 100 0 0 chr13 20549535 20549615 -99734697 + (TG)n Simple_repeat Simple_repeat 2 81 0 6 741 2256 239 25 23 chr13 20549615 20550086 -99734226 - MT2A LTR ERVL -68 465 1 6 741 938 286 103 84 chr13 20550086 20550270 -99734042 - ORR1D2 LTR MaLR -204 166 1 6 741 709 280 48 39 chr13 20550378 20550586 -99733726 + B3 SINE B2 1 210 -6 6 741 336 322 48 39 chr13 20551996 20552203 -99732109 + L2c LINE L2 2931 3139 -248 6 741 211 296 23 0 chr13 20552605 20552649 -99731663 + B4A SINE B4 88 132 -160 6 741 210 160 0 0 chr13 20553323 20553373 -99730939 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 741 742 188 104 14 chr13 20554248 20554459 -99729853 - Lx9 LINE L1 -1 7643 7414 6 741 1163 99 52 52 chr13 20554473 20554625 -99729687 + B2_Mm2 SINE B2 1 159 -36 7 741 279 0 0 0 chr13 20554625 20554656 -99729656 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 7 741 1163 99 52 52 chr13 20554656 20554695 -99729617 + B2_Mm2 SINE B2 160 192 -3 7 741 188 290 179 70 chr13 20554872 20555028 -99729284 + MIR SINE MIR 25 197 -65 7 741 374 329 49 6 chr13 20555955 20556117 -99728195 - RMER15 LTR ERVL -36 539 371 7 741 263 259 0 0 chr13 20557319 20557377 -99726935 + B3A SINE B2 3 60 -138 7 741 22 0 0 0 chr13 20560336 20560358 -99723954 + AT_rich Low_complexity Low_complexity 1 22 0 7 741 215 103 26 0 chr13 20560557 20560596 -99723716 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 741 296 354 32 0 chr13 20562275 20562416 -99721896 + MIR SINE MIR 33 187 -81 7 741 186 43 0 0 chr13 20564277 20564300 -99720012 + (TC)n Simple_repeat Simple_repeat 2 24 0 7 741 332 234 0 0 chr13 20567337 20567401 -99716911 + ID4_ SINE ID 1 64 -19 7 741 2002 260 96 37 chr13 20567873 20568548 -99715764 - Lx8 LINE L1 -2 7471 6757 8 741 210 37 0 0 chr13 20568557 20568584 -99715728 + (TTG)n Simple_repeat Simple_repeat 2 28 0 8 741 1118 69 0 34 chr13 20568588 20568737 -99715575 - B1_Mus1 SINE Alu 0 148 5 8 741 442 258 0 14 chr13 20568805 20568917 -99715395 - B1_Mur3 SINE Alu -12 108 2 8 741 1098 115 0 0 chr13 20569546 20569895 -99714417 + (CA)n Simple_repeat Simple_repeat 1 349 0 8 741 257 305 151 14 chr13 20570382 20570728 -99713584 - Charlie5 DNA MER1_type 0 2624 2237 8 741 320 292 58 8 chr13 20571197 20571318 -99712994 - MLT1A1 LTR MaLR 0 408 282 8 741 615 283 23 93 chr13 20575994 20576294 -99708018 + MLT1B LTR MaLR 105 383 -7 8 741 320 270 70 0 chr13 20576594 20576694 -99707618 - MTE2a LTR MaLR -193 186 80 8 741 339 245 41 31 chr13 20576713 20576810 -99707502 + MTD LTR MaLR 11 108 -311 8 741 186 255 0 18 chr13 20577030 20577086 -99707226 - MER5B DNA MER1_type 0 178 124 9 741 4418 20 0 0 chr13 20577360 20577859 -99706453 + L1Md_T LINE L1 5088 5586 -297 9 92 8528 38 0 0 chr13 20577859 20578855 -99705457 + L1Md_T LINE L1 5587 6582 0 9 742 677 71 35 0 chr13 20579652 20579765 -99704547 + (TG)n Simple_repeat Simple_repeat 1 117 0 9 742 351 0 0 0 chr13 20579765 20579803 -99704509 + (GA)n Simple_repeat Simple_repeat 1 39 0 9 742 4161 53 6 0 chr13 20580142 20580648 -99703664 - L1_Mus1 LINE L1 0 6567 6059 9 742 279 0 0 0 chr13 20580825 20580856 -99703456 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 9 742 1137 52 0 0 chr13 20580856 20580991 -99703321 - B1_Mus1 SINE Alu -13 135 1 9 742 857 206 57 33 chr13 20581094 20581305 -99703007 - B3 SINE B2 0 216 1 9 742 22 0 0 0 chr13 20581305 20581327 -99702985 + AT_rich Low_complexity Low_complexity 1 22 0 9 742 231 181 0 40 chr13 20582458 20582533 -99701779 + (TTA)n Simple_repeat Simple_repeat 1 72 0 9 742 265 324 35 35 chr13 20583731 20583846 -99700466 - L2b LINE L2 -14 3361 3247 1 742 254 276 120 16 chr13 20584890 20585015 -99699297 - L4 LINE RTE -234 1795 1658 1 742 235 362 21 0 chr13 20585035 20585129 -99699183 - L2c LINE L2 -22 3365 3270 1 742 333 0 0 0 chr13 20587398 20587435 -99696877 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 742 489 17 0 0 chr13 20587918 20587976 -99696336 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 742 1206 263 18 70 chr13 20589003 20589403 -99694909 - MTE2a LTR MaLR 0 379 1 1 742 5628 188 98 5 chr13 20589497 20589835 -99694477 + Lx9 LINE L1 6396 6752 -892 1 742 429 54 0 0 chr13 20589835 20589891 -99694421 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 742 5628 188 98 5 chr13 20589891 20590694 -99693618 + Lx9 LINE L1 6753 7642 -2 1 742 373 315 75 65 chr13 20590732 20590946 -99693366 + B4 SINE B4 10 225 -67 1 742 23 54 0 0 chr13 20591108 20591145 -99693167 + AT_rich Low_complexity Low_complexity 1 37 0 1 742 342 348 120 10 chr13 20591163 20591471 -99692841 - L2 LINE L2 -433 2986 2645 1 742 1329 164 236 11 chr13 20591492 20591618 -99692694 - Lx9 LINE L1 0 7644 7478 1 742 234 62 0 0 chr13 20591618 20591650 -99692662 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 742 1329 164 236 11 chr13 20591650 20591887 -99692425 - Lx9 LINE L1 -167 7477 7200 1 742 189 311 54 0 chr13 20592410 20592484 -99691828 - L2 LINE L2 -1364 2055 1978 1 742 590 299 6 0 chr13 20594439 20594606 -99689706 - MTE2b LTR MaLR 0 379 212 1 742 458 300 120 10 chr13 20594769 20594961 -99689351 - MTE2b LTR MaLR -166 213 1 1 742 455 270 24 101 chr13 20596355 20596524 -99687788 - MTD LTR MaLR -55 364 209 1 742 210 359 29 19 chr13 20596771 20596876 -99687436 - MER5A DNA MER1_type -44 145 40 1 742 478 281 32 24 chr13 20597025 20597273 -99687039 - RLTR15 LTR ERVK -65 294 45 1 742 188 376 32 0 chr13 20597727 20597852 -99686460 + MIRb SINE MIR 59 187 -81 1 742 222 24 45 45 chr13 20598000 20598044 -99686268 + (CAAA)n Simple_repeat Simple_repeat 3 46 0 1 742 388 333 12 49 chr13 20598073 20598237 -99686075 - Tigger7 DNA MER2_type 0 2491 2334 1 742 195 170 0 0 chr13 20598455 20598502 -99685810 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 742 182 91 0 29 chr13 20598504 20598538 -99685774 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 1 742 25 0 0 0 chr13 20598700 20598725 -99685587 + AT_rich Low_complexity Low_complexity 1 25 0 1 742 357 345 43 14 chr13 20598735 20598876 -99685436 - RSINE1 SINE B4 -18 147 3 1 742 188 125 0 0 chr13 20599967 20599999 -99684313 - MIRm SINE MIR -8 268 237 1 742 328 303 65 24 chr13 20601198 20601367 -99682945 + MER20 DNA MER1_type 37 212 -7 1 742 4244 29 0 0 chr13 20601948 20602434 -99681878 - L1Md_T LINE L1 -1 6581 6096 1 742 180 111 0 0 chr13 20605274 20605301 -99679011 + (TCCC)n Simple_repeat Simple_repeat 1 27 0 1 742 600 84 0 0 chr13 20605692 20605775 -99678537 + (GA)n Simple_repeat Simple_repeat 2 84 0 1 742 725 118 8 0 chr13 20605881 20606000 -99678312 + (GA)n Simple_repeat Simple_repeat 1 120 0 1 742 504 0 0 0 chr13 20607242 20607298 -99677014 + (TA)n Simple_repeat Simple_repeat 1 56 0 1 742 570 349 62 39 chr13 20607661 20608016 -99676296 - MLT1A0 LTR MaLR 0 365 3 1 742 454 178 0 123 chr13 20610461 20610583 -99673729 - MTD LTR MaLR -236 183 77 1 742 293 231 97 21 chr13 20610791 20610884 -99673428 - MLT1A1 LTR MaLR -2 406 307 1 742 498 228 158 42 chr13 20611519 20611734 -99672578 - Tigger13a DNA MER2_type -473 298 59 1 742 430 283 84 16 chr13 20612137 20612327 -99671985 - MLT1C LTR MaLR -5 462 260 1 742 240 228 0 17 chr13 20613905 20613946 -99670366 + polypurine Low_complexity Low_complexity 3 42 0 1 742 1146 122 0 0 chr13 20613946 20614126 -99670186 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 1 742 240 228 0 17 chr13 20614126 20614142 -99670170 + polypurine Low_complexity Low_complexity 43 58 0 1 742 537 215 93 19 chr13 20615998 20616159 -99668153 + MTEb LTR MaLR 205 377 -2 1 742 427 312 21 0 chr13 20616212 20616353 -99667959 + ID_B1 SINE B4 79 222 -2 1 742 477 0 0 0 chr13 20616367 20616420 -99667892 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 742 887 136 7 26 chr13 20616550 20616701 -99667611 - B1_Mur4 SINE Alu -1 149 2 1 742 515 291 135 23 chr13 20617844 20618104 -99666208 + B4A SINE B4 2 290 -2 1 742 378 0 0 0 chr13 20621556 20621598 -99662714 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 742 459 52 0 0 chr13 20621675 20621733 -99662579 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 742 40240 33 7 6 chr13 20622475 20628839 -99655473 - L1Md_T LINE L1 0 6582 208 1 742 184 169 197 33 chr13 20629374 20629435 -99654877 + MIR SINE MIR 34 104 -104 1 742 207 100 0 0 chr13 20630410 20630440 -99653872 + (T)n Simple_repeat Simple_repeat 1 30 0 1 742 382 289 16 0 chr13 20630536 20630657 -99653655 - MER20 DNA MER1_type -8 211 89 1 742 216 208 19 0 chr13 20631147 20631200 -99653112 + T-rich Low_complexity Low_complexity 3 56 0 1 742 21 57 0 0 chr13 20632335 20632370 -99651942 + AT_rich Low_complexity Low_complexity 1 35 0 1 742 661 253 160 0 chr13 20633428 20633653 -99650659 - MLT1A0 LTR MaLR -104 261 1 1 742 210 236 0 0 chr13 20633912 20633967 -99650345 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 742 2852 134 118 8 chr13 20636177 20636704 -99647608 + RMER4B LTR ERVK 1 585 0 1 742 241 338 51 32 chr13 20636739 20636895 -99647417 - L1M5 LINE L1 -440 5754 5596 1 742 364 218 0 19 chr13 20637442 20637545 -99646767 + Lx2 LINE L1 6896 6996 -1 1 742 23 0 0 0 chr13 20637545 20637568 -99646744 + AT_rich Low_complexity Low_complexity 1 23 0 1 742 372 22 0 0 chr13 20638119 20638164 -99646148 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 742 21 0 0 0 chr13 20640714 20640735 -99643577 + AT_rich Low_complexity Low_complexity 1 21 0 1 742 1779 160 13 64 chr13 20640938 20641311 -99643001 - ORR1B1 LTR MaLR 0 394 41 1 742 282 326 0 40 chr13 20642320 20642400 -99641912 - Tigger5 DNA MER2_type -2 2404 2325 1 742 324 299 84 17 chr13 20642400 20642519 -99641793 + PB1 SINE Alu 1 127 0 1 742 282 326 0 40 chr13 20642519 20642537 -99641775 - Tigger5 DNA MER2_type -82 2324 2310 1 742 285 29 0 0 chr13 20642542 20642576 -99641736 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 742 369 236 21 11 chr13 20643567 20643661 -99640651 - MIRc SINE MIR -137 131 37 1 742 1562 191 127 0 chr13 20644211 20644551 -99639761 + RMER4B LTR ERVK 199 581 -4 1 742 248 232 24 24 chr13 20644656 20644740 -99639572 + Lx8 LINE L1 7388 7471 -2 1 742 1611 56 0 0 chr13 20644842 20645040 -99639272 + L1_Mus1 LINE L1 6367 6564 -3 1 742 614 79 11 0 chr13 20645428 20645517 -99638795 + (TTCC)n Simple_repeat Simple_repeat 2 91 0 1 742 522 0 0 0 chr13 20645519 20645577 -99638735 + (TTCTC)n Simple_repeat Simple_repeat 3 60 0 1 742 254 180 49 0 chr13 20647437 20647498 -99636814 - 4.5SRNA scRNA scRNA -30 64 1 1 742 718 322 75 0 chr13 20647701 20648021 -99636291 + MER2 DNA MER2_type 1 344 -1 1 742 646 309 54 19 chr13 20648707 20648968 -99635344 + B4A SINE B4 1 270 -22 1 742 546 98 0 0 chr13 20648968 20649050 -99635262 + (CA)n Simple_repeat Simple_repeat 1 82 0 1 742 996 260 80 41 chr13 20651214 20651579 -99632733 - MTE2b LTR MaLR 0 379 1 1 742 843 223 72 5 chr13 20653552 20653746 -99630566 - B3 SINE B2 -5 211 5 1 742 241 206 83 56 chr13 20654301 20654373 -99629939 + MIR3 SINE MIR 92 171 -105 1 742 429 36 0 0 chr13 20655423 20655478 -99628834 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 742 270 106 0 0 chr13 20657143 20657190 -99627122 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 742 380 74 62 0 chr13 20657659 20657740 -99626572 + (GTTTG)n Simple_repeat Simple_repeat 2 87 0 1 742 180 152 0 0 chr13 20659633 20659666 -99624646 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1 742 21 57 0 0 chr13 20659851 20659886 -99624426 + AT_rich Low_complexity Low_complexity 1 35 0 1 742 423 340 224 2 chr13 20660463 20660864 -99623448 - L2 LINE L2 -632 2787 2298 1 742 495 48 0 0 chr13 20661607 20661669 -99622643 + (GA)n Simple_repeat Simple_repeat 2 63 0 1 742 231 167 0 0 chr13 20661672 20661714 -99622598 + G-rich Low_complexity Low_complexity 1 42 0 1 742 839 293 152 24 chr13 20662291 20662627 -99621685 - MTE2b LTR MaLR 0 379 1 1 742 1024 229 15 5 chr13 20662669 20662875 -99621437 - B3 SINE B2 -7 209 2 1 742 242 268 35 11 chr13 20664813 20664900 -99619412 - MIR SINE MIR -78 184 96 1 742 384 345 47 40 chr13 20665014 20665162 -99619150 - RSINE1 SINE B4 -2 163 15 1 742 1081 48 7 0 chr13 20666832 20666977 -99617335 - B1_Mus2 SINE Alu 0 147 2 1 742 190 347 19 67 chr13 20667574 20667679 -99616633 + MIRb SINE MIR 99 198 -70 1 742 231 279 0 0 chr13 20669339 20669400 -99614912 - MER3 DNA MER1_type -147 62 2 1 742 769 251 133 69 chr13 20669493 20669881 -99614431 + MTD LTR MaLR 3 379 0 1 742 625 108 18 0 chr13 20671888 20671944 -99612368 + (TCC)n Simple_repeat Simple_repeat 1 57 0 1 742 1773 68 0 8 chr13 20671944 20672180 -99612132 - L1_Mus2 LINE L1 0 6566 6333 1 742 625 108 18 0 chr13 20672180 20672234 -99612078 + (TCC)n Simple_repeat Simple_repeat 3 57 0 1 742 740 163 7 0 chr13 20673829 20673970 -99610342 + URR1B DNA MER1_type 82 223 -2 1 742 656 89 0 10 chr13 20674247 20674349 -99609963 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 1 742 471 83 531 0 chr13 20674349 20674445 -99609867 - B1_Mus1 SINE Alu 0 148 2 1 742 389 335 11 29 chr13 20675626 20675801 -99608511 - Charlie18a DNA MER1_type -164 178 7 1 742 3355 214 37 56 chr13 20676688 20677505 -99606807 + Lx7 LINE L1 6896 7696 0 2 742 276 304 116 40 chr13 20678105 20678320 -99605992 - MIRb SINE MIR 0 268 34 2 742 236 83 0 0 chr13 20678775 20678811 -99605501 + U2 snRNA snRNA 1 36 -152 2 742 241 267 52 30 chr13 20678900 20679014 -99605298 + MIR SINE MIR 25 142 -134 2 742 351 252 36 36 chr13 20682336 20682447 -99601865 + PB1D10 SINE Alu 7 117 0 2 742 259 264 36 54 chr13 20683719 20683831 -99600481 + L1MCa LINE L1 1023 1132 -4913 2 742 299 210 48 56 chr13 20683809 20683935 -99600377 + L1MCa LINE L1 1948 2072 -4679 2 742 216 163 0 0 chr13 20684314 20684357 -99599955 + A-rich Low_complexity Low_complexity 1 43 0 2 742 923 253 182 78 chr13 20684951 20685351 -99598961 + L1MCa LINE L1 2635 3127 -3437 2 742 189 0 0 0 chr13 20685351 20685372 -99598940 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 742 923 253 182 78 chr13 20685372 20685774 -99598538 + L1MCa LINE L1 3128 3520 -3044 2 742 304 279 52 46 chr13 20686769 20686792 -99597520 + CYRA11_Mm Unknown Y-chromosome 148 267 -350 2 742 803 141 0 0 chr13 20686792 20686934 -99597378 - URR1B DNA MER1_type -1 224 83 2 742 2473 37 97 0 chr13 20687260 20687611 -99596701 - RLTR10 LTR ERVK -5 385 1 2 742 198 0 0 0 chr13 20689231 20689253 -99595059 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 742 222 37 0 0 chr13 20690520 20690547 -99593765 + (CTTG)n Simple_repeat Simple_repeat 4 30 0 2 742 411 349 40 49 chr13 20693783 20694006 -99590306 + B4A SINE B4 1 221 -71 2 742 357 93 0 0 chr13 20694076 20694130 -99590182 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 742 280 308 145 61 chr13 20694144 20694441 -99589871 - MLT1D LTR MaLR -305 322 1 2 742 280 319 84 82 chr13 20694560 20695106 -99589206 - L1MC5 LINE L1 -723 7238 6692 2 742 231 311 83 8 chr13 20695438 20695558 -99588754 + MER5B DNA MER1_type 1 129 -49 2 742 570 15 0 0 chr13 20697479 20697546 -99586766 + (TTCC)n Simple_repeat Simple_repeat 2 68 0 2 742 258 134 116 29 chr13 20698440 20698509 -99585803 + MER5A DNA MER1_type 29 103 -86 2 742 1042 266 159 13 chr13 20699365 20699927 -99584385 - L1MA6 LINE L1 0 6300 5662 2 742 533 204 18 9 chr13 20700361 20700475 -99583837 + B1_Mur1 SINE Alu 13 127 -22 2 742 293 221 191 34 chr13 20700477 20700566 -99583746 + PB1D10 SINE Alu 15 117 0 2 742 221 208 42 0 chr13 20701231 20701279 -99583033 + MIRc SINE MIR 97 146 -122 2 742 218 213 21 0 chr13 20701340 20701387 -99582925 + CT-rich Low_complexity Low_complexity 3 50 0 2 742 200 119 50 17 chr13 20702266 20702326 -99581986 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 742 382 175 38 14 chr13 20702342 20702553 -99581759 + (CA)n Simple_repeat Simple_repeat 1 216 0 2 742 727 264 47 47 chr13 20702609 20702887 -99581425 - B4A SINE B4 -12 280 3 2 742 550 195 0 26 chr13 20702903 20703019 -99581293 + Lx7 LINE L1 7584 7696 0 2 742 287 221 14 42 chr13 20703570 20703641 -99580671 + Lx8 LINE L1 7200 7268 -205 2 742 390 266 15 46 chr13 20704767 20704897 -99579415 + B3A SINE B2 73 198 0 2 742 282 208 48 19 chr13 20704904 20705007 -99579305 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 2 742 500 333 29 0 chr13 20706277 20706451 -99577861 + MTE2a LTR MaLR 201 379 0 2 742 218 292 27 14 chr13 20706551 20706624 -99577688 + B1F SINE Alu 11 84 -65 2 742 233 75 25 0 chr13 20706634 20706674 -99577638 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 2 742 546 221 28 42 chr13 20706828 20706970 -99577342 - MER20 DNA MER1_type -78 141 2 2 742 950 87 7 0 chr13 20708835 20708973 -99575339 + (GGAA)n Simple_repeat Simple_repeat 3 141 0 2 743 192 244 0 0 chr13 20709878 20709919 -99574393 + MIRc SINE MIR 111 151 -117 2 743 3031 168 111 32 chr13 20709972 20710538 -99573774 + RMER19C LTR ERVK 1 611 0 2 743 301 264 0 0 chr13 20710571 20710643 -99573669 + ID4 SINE ID 8 79 -4 2 743 830 382 40 0 chr13 20711022 20711375 -99572937 - MLT1F LTR MaLR -172 376 10 2 743 23 0 0 0 chr13 20712685 20712708 -99571604 + AT_rich Low_complexity Low_complexity 1 23 0 2 743 1125 282 25 3 chr13 20713018 20713381 -99570931 - L1MB7 LINE L1 -48 6136 5766 2 743 333 0 0 0 chr13 20713396 20713433 -99570879 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 2 743 839 227 76 20 chr13 20713433 20713631 -99570681 - ID_B1 SINE B4 -13 211 3 2 743 452 351 80 6 chr13 20713647 20713822 -99570490 - B3A SINE B2 -7 191 4 2 743 864 304 121 46 chr13 20713844 20714794 -99569518 - L1ME3A LINE L1 -18 6155 5129 2 743 273 314 144 11 chr13 20716781 20716968 -99567344 - MLT1F1 LTR MaLR -64 505 294 2 743 1614 222 85 2 chr13 20717094 20717389 -99566923 + Lx9 LINE L1 7162 7475 -169 2 743 306 0 0 0 chr13 20717389 20717423 -99566889 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 743 1614 222 85 2 chr13 20717423 20717448 -99566864 + Lx9 LINE L1 7476 7509 -135 2 743 252 122 0 0 chr13 20717448 20717489 -99566823 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 743 1614 222 85 2 chr13 20717489 20717591 -99566721 + Lx9 LINE L1 7510 7618 -26 2 743 1514 272 30 48 chr13 20717603 20718108 -99566204 - Lx8 LINE L1 -397 7076 6581 2 743 660 235 88 53 chr13 20718149 20718432 -99565880 + L1_Rod LINE L1 5465 5757 -90 2 743 355 245 0 31 chr13 20718448 20718545 -99565767 - L1_Mur3 LINE L1 -1146 4734 4641 2 743 1371 199 7 58 chr13 20718547 20718856 -99565456 + ORR1C2 LTR MaLR 3 295 -89 2 743 416 147 137 0 chr13 20718961 20719056 -99565256 + MTC-int LTR MaLR 1148 1255 -3 2 743 1830 206 22 17 chr13 20719059 20719473 -99564839 + MTC LTR MaLR 1 416 -5 2 743 342 91 0 0 chr13 20720092 20720147 -99564165 + (TC)n Simple_repeat Simple_repeat 1 55 0 2 743 315 0 0 0 chr13 20720147 20720182 -99564130 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 743 1798 284 87 64 chr13 20720182 20721378 -99562934 - L1_Rod LINE L1 -3035 2812 1590 2 743 284 310 50 18 chr13 20721362 20721582 -99562730 - L1_Mur3 LINE L1 -4392 1488 1262 2 743 654 130 0 0 chr13 20721582 20721690 -99562622 + (TC)n Simple_repeat Simple_repeat 2 109 0 2 743 29 0 0 0 chr13 20721690 20721719 -99562593 + AT_rich Low_complexity Low_complexity 1 29 0 2 743 3250 132 5 55 chr13 20721721 20722290 -99562022 - Lx4A LINE L1 0 7058 6518 2 743 556 316 11 44 chr13 20723034 20723216 -99561096 - B4A SINE B4 -116 176 1 2 743 260 274 0 0 chr13 20723753 20723815 -99560497 - B3A SINE B2 -90 108 47 2 743 434 229 0 8 chr13 20724219 20724342 -99559970 + GA-rich Low_complexity Low_complexity 2 123 0 2 743 323 143 0 25 chr13 20724740 20724819 -99559493 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 2 743 379 274 42 8 chr13 20725882 20726000 -99558312 + RSINE1 SINE B4 38 159 -6 2 743 220 268 14 40 chr13 20726059 20726133 -99558179 - L2a LINE L2 -286 3140 3069 2 743 315 0 0 0 chr13 20726578 20726613 -99557699 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 743 1998 111 8 85 chr13 20729824 20729905 -99554407 - ORR1A2 LTR MaLR 0 327 268 2 743 5827 94 39 7 chr13 20729905 20730753 -99553559 - Lx3_Mus LINE L1 0 7009 6135 2 743 1998 111 8 85 chr13 20730753 20731025 -99553287 - ORR1A2 LTR MaLR -60 267 1 2 743 402 219 142 9 chr13 20731025 20731130 -99553182 - ORR1C1 LTR MaLR -33 345 227 2 743 612 226 181 25 chr13 20731135 20731339 -99552973 - RMER4B LTR ERVK -7 578 343 2 743 192 186 0 0 chr13 20731357 20731416 -99552896 + (CAAT)n Simple_repeat Simple_repeat 3 61 0 2 743 295 123 31 0 chr13 20731532 20731597 -99552715 - RMER4B LTR ERVK -502 83 17 2 743 823 207 114 27 chr13 20731604 20731823 -99552489 - ORR1C1 LTR MaLR -140 238 1 2 743 216 24 23 47 chr13 20732501 20732544 -99551768 + (CAA)n Simple_repeat Simple_repeat 2 43 0 2 743 748 334 191 21 chr13 20733420 20734172 -99550140 - MER54A LTR ERVL -8 893 14 2 743 777 319 65 16 chr13 20735006 20735251 -99549061 - B4 SINE B4 -6 286 30 2 743 700 286 40 0 chr13 20735815 20735990 -99548322 - B3 SINE B2 -5 211 30 2 743 234 0 0 0 chr13 20739124 20739150 -99545162 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 743 225 146 0 0 chr13 20739160 20739208 -99545104 + (TGG)n Simple_repeat Simple_repeat 1 48 0 2 743 387 0 0 0 chr13 20739209 20739252 -99545060 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 743 256 231 38 25 chr13 20740054 20740134 -99544178 + LTR84b LTR ERVL 198 278 -483 2 743 195 69 0 0 chr13 20740840 20740869 -99543443 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 2 743 263 302 0 20 chr13 20741562 20741660 -99542652 + L1_Mur3 LINE L1 2494 2589 -3291 2 743 453 19 0 0 chr13 20741771 20741825 -99542487 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 743 2269 79 254 44 chr13 20741850 20742303 -99542009 - RLTR6_Mm LTR ERV1 -70 584 37 2 743 68315 18 14 1 chr13 20742413 20750086 -99534226 - RLTR6-int LTR ERV1 0 7778 1 2 743 2431 75 243 42 chr13 20750086 20750560 -99533752 - RLTR6_Mm LTR ERV1 -49 605 37 2 743 359 313 39 29 chr13 20750705 20750909 -99533403 + L1_Rod LINE L1 2822 3027 -2820 2 743 261 250 0 15 chr13 20750905 20750970 -99533342 - Lx8 LINE L1 -681 6792 6729 2 743 347 292 29 59 chr13 20751046 20751250 -99533062 + Lx8 LINE L1 7261 7458 -15 2 743 25 31 0 0 chr13 20751326 20751358 -99532954 + AT_rich Low_complexity Low_complexity 1 32 0 2 743 843 218 33 43 chr13 20751385 20751596 -99532716 + B3 SINE B2 4 212 -4 2 743 489 234 9 0 chr13 20751964 20752071 -99532241 - PB1D7 SINE Alu -1 119 12 2 743 328 291 75 0 chr13 20752098 20752232 -99532080 - Tigger13a DNA MER2_type -423 348 205 2 743 265 0 29 0 chr13 20752415 20752450 -99531862 - U2 snRNA snRNA -152 36 1 2 743 240 35 0 0 chr13 20752530 20752559 -99531753 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 2 743 340 331 6 25 chr13 20752591 20752604 -99531708 + ID_B1 SINE B4 70 221 0 2 743 562 239 49 0 chr13 20752604 20752746 -99531566 + B1_Mur2 SINE Alu 1 149 0 2 743 390 232 70 26 chr13 20752966 20753071 -99531241 + PB1D10 SINE Alu 8 111 -6 2 743 21 0 0 31 chr13 20753920 20753936 -99530376 + AT_rich Low_complexity Low_complexity 1 16 0 2 743 425 322 13 32 chr13 20753936 20754090 -99530222 - RSINE1 SINE B4 -12 153 3 3 743 21 0 0 31 chr13 20754090 20754105 -99530207 + AT_rich Low_complexity Low_complexity 1 15 0 3 743 279 341 82 52 chr13 20754171 20754440 -99529872 - B4 SINE B4 -11 281 5 3 743 303 28 0 0 chr13 20754475 20754511 -99529801 + (GA)n Simple_repeat Simple_repeat 1 36 0 3 743 352 273 195 0 chr13 20755083 20755211 -99529101 + RSINE1 SINE B4 3 155 -10 3 743 1290 215 71 65 chr13 20756092 20756277 -99528035 + ORR1D2 LTR MaLR 1 172 -198 3 743 5126 153 38 25 chr13 20756277 20757167 -99527145 + RMER19B LTR ERVK 1 902 0 3 743 1290 215 71 65 chr13 20757167 20757349 -99526963 + ORR1D2 LTR MaLR 173 370 0 3 743 393 309 72 27 chr13 20757399 20757712 -99526600 + ORR1E LTR MaLR 10 359 -20 3 743 428 297 117 0 chr13 20758901 20759029 -99525283 + B1_Mur1 SINE Alu 7 149 0 3 743 403 260 171 0 chr13 20759042 20759188 -99525124 + L1M2 LINE L1 5606 5776 -524 3 743 354 45 0 0 chr13 20759188 20759232 -99525080 + (GAAA)n Simple_repeat Simple_repeat 3 46 0 3 743 2419 219 21 19 chr13 20759232 20759754 -99524558 + Lx9 LINE L1 6962 7484 -160 3 743 591 179 34 43 chr13 20759794 20759911 -99524401 - Lx9 LINE L1 -1092 6552 6437 3 743 534 16 0 0 chr13 20760061 20760124 -99524188 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 743 285 29 0 0 chr13 20760124 20760157 -99524155 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 743 41817 12 1 1 chr13 20760191 20767375 -99516937 - L1Md_A LINE L1 0 6582 1 3 743 10758 29 11 30 chr13 20767376 20768766 -99515546 - L1Md_A LINE L1 -4522 1361 1 3 743 970 255 7 41 chr13 20769327 20769691 -99514621 + MTD LTR MaLR 3 403 -16 3 743 2220 239 50 58 chr13 20769711 20770372 -99513940 + MTD-int LTR MaLR 21 676 -582 3 743 1023 32 0 0 chr13 20770390 20770513 -99513799 + (GA)n Simple_repeat Simple_repeat 1 123 0 3 743 1674 205 119 8 chr13 20770550 20770929 -99513383 - MTC LTR MaLR 0 421 1 3 743 761 102 128 17 chr13 20770929 20771108 -99513204 - MTC-int LTR MaLR 0 1258 1060 3 743 1289 239 80 14 chr13 20771127 20771572 -99512740 - Lx2B LINE L1 0 7058 6486 3 743 1024 103 19 6 chr13 20771552 20771708 -99512604 - Lx3C LINE L1 -1097 5879 5722 3 743 322 147 283 33 chr13 20771711 20771831 -99512481 - MTC-int LTR MaLR -214 1044 895 3 743 9091 119 40 9 chr13 20771831 20773361 -99510951 + Lx2B LINE L1 5420 6994 -6 3 743 4127 182 70 6 chr13 20773362 20773590 -99510722 - MTC-int LTR MaLR -330 928 674 3 743 2174 206 23 154 chr13 20773590 20774291 -99510021 - RMER19C LTR ERVK 0 611 3 3 743 4127 182 70 6 chr13 20774291 20774934 -99509378 - MTC-int LTR MaLR -585 673 2 3 743 1696 218 78 5 chr13 20774936 20775310 -99509002 - MTC LTR MaLR -8 413 13 3 743 839 284 61 55 chr13 20775319 20775680 -99508632 + MTD-int LTR MaLR 725 1087 -171 3 743 447 307 88 5 chr13 20775775 20775968 -99508344 + MER2 DNA MER2_type 122 330 -15 3 743 329 230 13 26 chr13 20776052 20776128 -99508184 - MLT1E2 LTR MaLR -552 75 1 3 743 674 321 29 52 chr13 20777030 20777375 -99506937 + MT2A LTR ERVL 84 420 -113 3 743 249 238 10 19 chr13 20777443 20777546 -99506766 + (TATG)n Simple_repeat Simple_repeat 2 103 0 3 743 342 0 0 0 chr13 20777733 20777771 -99506541 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 743 1268 220 48 42 chr13 20778183 20778472 -99505840 - B4A SINE B4 0 292 2 3 743 211 314 24 8 chr13 20778589 20778714 -99505598 + (TG)n Simple_repeat Simple_repeat 2 128 0 3 743 212 267 0 0 chr13 20778651 20778711 -99505601 + (TATG)n Simple_repeat Simple_repeat 1 60 0 3 743 3141 29 3 11 chr13 20780130 20780479 -99503833 - ORR1A0 LTR MaLR 0 346 1 3 743 1991 216 9 26 chr13 20781006 20781430 -99502882 - MTD LTR MaLR -2 417 1 3 743 3449 223 76 134 chr13 20781430 20782766 -99501546 - MTD-int LTR MaLR 0 1258 1 3 743 1705 190 62 15 chr13 20782766 20783035 -99501277 - MTD LTR MaLR 0 419 141 3 743 3793 79 13 0 chr13 20783035 20783501 -99500811 + L1_Mus1 LINE L1 6095 6566 -1 3 743 1705 190 62 15 chr13 20783501 20783567 -99500745 - MTD LTR MaLR -279 140 68 3 743 38154 60 3 3 chr13 20783573 20789780 -99494532 - L1Md_F3 LINE L1 0 6584 422 3 743 386 225 0 0 chr13 20789780 20789860 -99494452 - MTD LTR MaLR -341 80 1 3 743 305 327 86 13 chr13 20790109 20790261 -99494051 - MIR SINE MIR -50 212 50 3 743 423 0 0 0 chr13 20790979 20791026 -99493286 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 743 396 0 0 0 chr13 20791417 20791461 -99492851 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 743 242 274 0 0 chr13 20792092 20792143 -99492169 + polypurine Low_complexity Low_complexity 4 54 0 3 743 3077 261 87 54 chr13 20792493 20793472 -99490840 + Lx8 LINE L1 6326 7336 -137 3 743 1374 248 66 0 chr13 20793515 20793818 -99490494 + ORR1C2 LTR MaLR 1 323 -61 3 743 5395 217 117 15 chr13 20793844 20795088 -99489224 + ORR1C2-int LTR MaLR 1 1370 0 3 743 1148 177 108 187 chr13 20795088 20795318 -99488994 + ORR1C2 LTR MaLR 1 196 -188 3 743 1347 7 0 0 chr13 20795318 20795470 -99488842 + (TCTCCC)n Simple_repeat Simple_repeat 3 154 0 3 743 1148 177 108 187 chr13 20795470 20795656 -99488656 + ORR1C2 LTR MaLR 197 384 0 3 743 470 214 171 0 chr13 20795869 20796009 -99488303 - MER3 DNA MER1_type -40 169 6 3 743 224 259 93 17 chr13 20798560 20798645 -99485667 - MIRm SINE MIR -120 156 63 3 743 258 277 66 47 chr13 20801673 20801779 -99482533 - L2b LINE L2 -9 3366 3259 3 743 313 157 129 0 chr13 20801788 20801858 -99482454 + MIR SINE MIR 183 261 -1 3 743 216 0 0 0 chr13 20802474 20802498 -99481814 + (CCA)n Simple_repeat Simple_repeat 3 26 0 3 743 309 26 0 0 chr13 20802498 20802536 -99481776 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 743 360 0 0 0 chr13 20802734 20802774 -99481538 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 743 301 281 177 105 chr13 20802799 20803065 -99481247 - B4 SINE B4 -6 286 2 3 743 1350 74 62 6 chr13 20804327 20804503 -99479809 - B2_Mm2 SINE B2 -9 186 1 3 743 42075 5 0 0 chr13 20804528 20810895 -99473417 - L1Md_A LINE L1 0 6582 214 3 743 24 0 0 0 chr13 20810896 20810920 -99473392 + AT_rich Low_complexity Low_complexity 1 24 0 3 743 293 361 50 25 chr13 20810920 20811079 -99473233 - RSINE1 SINE B4 0 165 3 3 743 195 42 0 0 chr13 20811717 20811741 -99472571 + (ATG)n Simple_repeat Simple_repeat 3 26 0 3 743 995 144 0 11 chr13 20811761 20811943 -99472369 + GA-rich Low_complexity Low_complexity 1 180 0 3 743 198 0 0 0 chr13 20812415 20812437 -99471875 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 743 250 200 17 0 chr13 20812444 20812504 -99471808 + (TA)n Simple_repeat Simple_repeat 1 61 0 3 743 26 50 0 0 chr13 20812552 20812592 -99471720 + AT_rich Low_complexity Low_complexity 1 40 0 3 743 511 252 75 155 chr13 20812647 20812821 -99471491 + B3A SINE B2 2 164 -34 3 743 369 0 0 0 chr13 20812825 20812866 -99471446 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 743 942 106 17 26 chr13 20812892 20813081 -99471231 + B2_Mm2 SINE B2 2 185 -8 3 743 466 186 102 36 chr13 20813158 20813308 -99471004 - LTR40c LTR ERVL -5 460 315 3 743 690 47 0 0 chr13 20813523 20813609 -99470703 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 3 743 866 140 0 22 chr13 20813643 20813826 -99470486 + GA-rich Low_complexity Low_complexity 2 180 0 3 743 253 343 13 93 chr13 20813980 20814131 -99470181 + MLT2D LTR ERVL 220 358 -56 3 743 286 361 57 6 chr13 20814528 20814687 -99469625 - MIRb SINE MIR -10 258 92 3 743 1551 206 123 14 chr13 20814699 20815064 -99469248 + MTD LTR MaLR 3 407 -12 3 743 284 290 41 41 chr13 20816096 20816193 -99468119 - ERVL-E-int LTR ERVL -708 5006 4910 3 743 2757 180 12 18 chr13 20816561 20817069 -99467243 - RLTR16 LTR ERVK 0 505 1 3 743 415 250 158 8 chr13 20817069 20817197 -99467115 + B3A SINE B2 1 149 -49 3 743 848 93 27 0 chr13 20817207 20817357 -99466955 + (CA)n Simple_repeat Simple_repeat 2 155 0 3 743 333 296 65 8 chr13 20817454 20817598 -99466714 - ERVL-E-int LTR ERVL -1442 4272 4059 3 743 812 325 18 11 chr13 20817667 20817953 -99466359 - ERVL-E-int LTR ERVL -3195 2472 2185 3 743 388 258 168 24 chr13 20818406 20818573 -99465739 + ORR1E LTR MaLR 1 191 -168 3 743 459 0 0 0 chr13 20819133 20819184 -99465128 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 743 741 276 20 0 chr13 20819187 20819339 -99464973 - B4 SINE B4 -19 273 119 3 743 22 0 0 0 chr13 20819371 20819393 -99464919 + AT_rich Low_complexity Low_complexity 1 22 0 3 743 426 85 0 0 chr13 20819414 20819473 -99464839 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 743 220 325 62 12 chr13 20819473 20819490 -99464822 - RSINE1 SINE B4 -69 96 80 3 743 1599 148 15 12 chr13 20819490 20819749 -99464563 - Lx4A LINE L1 -2 7056 6797 3 743 366 286 0 0 chr13 20819749 20819826 -99464486 - B4 SINE B4 -215 77 1 3 743 458 262 174 23 chr13 20820842 20821149 -99463163 + MLT1B LTR MaLR 2 381 -9 3 743 1659 189 46 62 chr13 20821164 20821537 -99462775 + Lx7 LINE L1 7119 7485 -211 3 743 6748 95 62 17 chr13 20821559 20822520 -99461792 - Lx3B LINE L1 -4 6969 5965 3 743 477 0 0 0 chr13 20822529 20822582 -99461730 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 743 21 0 0 0 chr13 20823090 20823111 -99461201 + AT_rich Low_complexity Low_complexity 1 21 0 3 743 2931 184 131 29 chr13 20823219 20823919 -99460393 + RLTR40 LTR ERVK 1 772 -45 3 743 1524 308 105 45 chr13 20824084 20825034 -99459278 + MER45B DNA Tip100 31 1037 -3 3 743 492 337 139 58 chr13 20826684 20827043 -99457269 + MLT1J2 LTR MaLR 13 400 -48 3 743 914 322 115 18 chr13 20827245 20827637 -99456675 - MER45B DNA Tip100 -590 450 21 3 743 508 274 24 67 chr13 20827673 20827742 -99456570 + RMER15 LTR ERVL 1 67 -508 3 743 1235 253 107 48 chr13 20827742 20828136 -99456176 - MTD LTR MaLR 0 419 3 3 743 508 274 24 67 chr13 20828136 20828230 -99456082 + RMER15 LTR ERVL 68 157 -418 3 743 1049 285 25 7 chr13 20828230 20828513 -99455799 + RMER15 LTR ERVL 274 561 -14 3 743 731 302 100 18 chr13 20829301 20829641 -99454671 - MER67B LTR ERV1 -10 651 284 3 743 271 340 32 3 chr13 20829945 20830078 -99454234 - MER67B LTR ERV1 -424 237 97 3 743 367 265 78 97 chr13 20830285 20830502 -99453810 + RLTR14 LTR ERV1 154 366 -16 3 743 1073 134 98 6 chr13 20830624 20830797 -99453515 + B2_Mm2 SINE B2 2 190 -5 3 743 1889 222 53 18 chr13 20831022 20831472 -99452840 - MTC-int LTR MaLR -791 467 2 3 743 1359 208 221 6 chr13 20831476 20831820 -99452492 - MTC LTR MaLR -3 418 1 3 743 4630 242 50 45 chr13 20831822 20832901 -99451411 + L1_Mur3 LINE L1 3388 4457 -1423 3 743 1208 88 0 0 chr13 20832901 20833048 -99451264 + B1_Mus1 SINE Alu 1 147 -1 3 743 243 0 0 0 chr13 20833050 20833077 -99451235 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 743 4084 240 51 50 chr13 20833077 20833667 -99450645 + L1_Mur3 LINE L1 4458 5068 -812 3 743 264 208 0 40 chr13 20833984 20834034 -99450278 + B1F SINE Alu 43 90 -59 3 743 869 216 261 0 chr13 20834045 20834370 -99449942 + MTC LTR MaLR 12 421 0 4 743 337 186 0 0 chr13 20834370 20834429 -99449883 + B1F SINE Alu 86 144 -5 3 743 725 186 202 45 chr13 20835605 20835843 -99448469 - RLTR26 LTR ERVK -648 258 1 4 743 7809 58 3 3 chr13 20837040 20837997 -99446315 + L1_Mus1 LINE L1 5611 6567 0 4 743 452 264 83 54 chr13 20838059 20838335 -99445977 + L1MD LINE L1 3674 3957 -2189 4 743 24 32 0 0 chr13 20838764 20838795 -99445517 + AT_rich Low_complexity Low_complexity 1 31 0 4 743 675 71 0 0 chr13 20839893 20839991 -99444321 + (CAAAC)n Simple_repeat Simple_repeat 2 99 0 4 744 195 242 0 0 chr13 20840527 20840589 -99443723 + GA-rich Low_complexity Low_complexity 2 63 0 4 744 282 29 0 0 chr13 20841138 20841173 -99443139 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 4 744 206 232 0 0 chr13 20841278 20841334 -99442978 + T-rich Low_complexity Low_complexity 1 56 0 4 744 198 156 0 0 chr13 20841403 20841448 -99442864 + A-rich Low_complexity Low_complexity 1 45 0 4 744 502 291 47 125 chr13 20841464 20841865 -99442447 + L1MEf LINE L1 1121 1490 -4710 4 744 496 316 26 79 chr13 20842270 20842497 -99441815 + MER20 DNA MER1_type 1 215 -4 4 744 233 30 30 0 chr13 20842605 20842638 -99441674 - B1_Mm SINE Alu -1 146 113 4 744 280 256 89 0 chr13 20842722 20842812 -99441500 + URR1A DNA MER1_type 9 106 -120 4 744 1277 48 0 0 chr13 20842831 20842978 -99441334 - B1_Mus2 SINE Alu 0 147 1 4 744 21843 44 5 1 chr13 20843081 20846435 -99437877 - L1Md_F3 LINE L1 -14 6570 3199 4 744 456 107 0 0 chr13 20846435 20846510 -99437802 + URR1A DNA MER1_type 88 162 -64 4 744 858 241 49 77 chr13 20846510 20846860 -99437452 + RLTR15 LTR ERVK 1 340 -19 4 744 431 171 0 0 chr13 20846866 20846942 -99437370 + URR1A DNA MER1_type 150 225 -1 4 744 481 235 84 6 chr13 20847126 20847293 -99437019 - L1MB1 LINE L1 -2 6289 6110 4 744 1092 182 5 25 chr13 20847293 20847490 -99436822 + Lx5 LINE L1 6685 6877 -173 4 744 844 240 194 20 chr13 20847567 20847873 -99436439 - L1MB1 LINE L1 -179 6010 5646 4 744 387 293 26 0 chr13 20847886 20848002 -99436310 + ORR1E LTR MaLR 3 121 -238 4 744 3851 176 75 16 chr13 20848019 20849232 -99435080 - Lx5 LINE L1 0 7050 5698 4 744 22530 154 40 43 chr13 20849861 20853109 -99431203 - Lx5 LINE L1 -171 5706 2452 4 744 192 40 0 0 chr13 20853109 20853134 -99431178 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 4 744 22530 154 40 43 chr13 20853134 20853516 -99430796 - Lx5 LINE L1 -3426 2451 2066 4 744 288 53 0 0 chr13 20853516 20853554 -99430758 + (TAG)n Simple_repeat Simple_repeat 3 40 0 4 744 22530 176 81 30 chr13 20853554 20854707 -99429605 - Lx5 LINE L1 -3812 2065 807 4 744 245 282 58 95 chr13 20854785 20854922 -99429390 + ORR1E LTR MaLR 114 245 -114 4 744 938 190 87 42 chr13 20854893 20855002 -99429310 + RMER17C LTR ERVK 112 231 -179 4 744 600 14 0 0 chr13 20855002 20855071 -99429241 + (TCTA)n Simple_repeat Simple_repeat 3 71 0 4 744 938 190 87 42 chr13 20855071 20855247 -99429065 + RMER17C LTR ERVK 232 410 0 4 744 207 0 0 0 chr13 20855392 20855415 -99428897 + (T)n Simple_repeat Simple_repeat 1 23 0 4 744 450 0 0 0 chr13 20855502 20855552 -99428760 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 744 342 265 51 0 chr13 20855892 20855979 -99428333 - ID4 SINE ID -60 92 2 4 744 341 266 102 31 chr13 20855987 20856115 -99428197 - B1F SINE Alu -3 146 10 4 744 1531 283 89 20 chr13 20856146 20856842 -99427470 - L1MB3 LINE L1 -10 6173 5430 4 744 303 241 82 18 chr13 20857547 20857657 -99426655 + LTR65 LTR ERV1 540 656 -13 4 744 717 272 56 177 chr13 20858577 20858746 -99425566 - MTEa LTR MaLR 0 379 204 4 744 1297 41 0 0 chr13 20858746 20858893 -99425419 + B1_Mus1 SINE Alu 2 148 0 4 744 717 272 56 177 chr13 20858893 20859064 -99425248 - MTEa LTR MaLR -176 203 84 4 744 1413 32 0 0 chr13 20859064 20859100 -99425212 + (CA)n Simple_repeat Simple_repeat 1 36 -185 4 744 1413 32 0 0 chr13 20859105 20859285 -99425027 + (CA)n Simple_repeat Simple_repeat 37 221 0 4 744 717 272 56 177 chr13 20859285 20859366 -99424946 - MTEa LTR MaLR -301 78 3 4 744 2392 281 81 28 chr13 20859372 20859500 -99424812 - MTEa-int LTR MaLR -4 1576 1450 4 744 1185 182 27 5 chr13 20859500 20859721 -99424591 - URR1A DNA MER1_type 0 226 1 4 744 2392 281 81 28 chr13 20859721 20860342 -99423970 - MTEa-int LTR MaLR -131 1449 787 4 744 3652 187 140 20 chr13 20860351 20861146 -99423166 - RMER19B LTR ERVK -12 890 1 4 744 508 275 172 25 chr13 20861146 20861343 -99422969 - MTEa-int LTR MaLR -784 796 571 4 744 520 281 56 0 chr13 20861343 20861503 -99422809 - RMER15 LTR ERVL 0 575 407 4 744 7144 69 12 1 chr13 20861630 20862557 -99421755 + RLTR13D5 LTR ERVK 1 937 -86 4 744 370 296 73 29 chr13 20862600 20862736 -99421576 - RMER15 LTR ERVL -159 416 275 4 744 1653 265 106 28 chr13 20862907 20863443 -99420869 - MTEa-int LTR MaLR -1002 578 1 4 744 772 248 98 55 chr13 20863443 20863699 -99420613 - MTEa LTR MaLR 0 379 113 4 744 241 266 214 0 chr13 20864432 20864559 -99419753 + MIRb SINE MIR 17 167 -101 4 744 21 0 0 0 chr13 20864646 20864667 -99419645 + AT_rich Low_complexity Low_complexity 1 21 0 4 744 227 276 195 17 chr13 20864780 20864898 -99419414 - MLT1D LTR MaLR -184 321 183 4 744 301 319 0 0 chr13 20864920 20864992 -99419320 + ID4 SINE ID 10 81 -2 4 744 246 318 30 53 chr13 20865009 20865142 -99419170 - MLT1D LTR MaLR -360 145 16 4 744 21 36 0 0 chr13 20865410 20865438 -99418874 + AT_rich Low_complexity Low_complexity 1 28 0 4 744 989 143 70 83 chr13 20865713 20865873 -99418439 + URR1A DNA MER1_type 1 163 -63 4 744 2975 85 50 2 chr13 20865873 20866276 -99418036 + BGLII_Mus LTR ERVK 1 422 0 4 744 989 143 70 83 chr13 20866276 20866344 -99417968 + URR1A DNA MER1_type 164 226 0 4 744 1144 269 90 23 chr13 20866380 20866723 -99417589 + Lx8 LINE L1 6412 6777 -696 4 744 1954 155 16 3 chr13 20866729 20867046 -99417266 + RLTR11A LTR ERVK 208 528 0 4 744 31 0 0 0 chr13 20867047 20867078 -99417234 + AT_rich Low_complexity Low_complexity 1 31 0 4 744 1672 284 104 18 chr13 20867105 20867664 -99416648 + Lx8 LINE L1 6832 7438 -35 4 744 1687 145 11 21 chr13 20867684 20868226 -99416086 - RLTR1C LTR ERV1 0 605 1 4 744 254 257 26 87 chr13 20868257 20868372 -99415940 + Charlie4z DNA MER1_type 42 149 -18 4 744 34087 70 2 12 chr13 20868862 20873860 -99410452 + L1Md_F2 LINE L1 641 5586 -297 4 744 8591 52 3 0 chr13 20873860 20874852 -99409460 + L1Md_F2 LINE L1 5587 6581 -1 4 744 207 0 0 0 chr13 20875301 20875324 -99408988 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 4 744 1031 275 128 27 chr13 20875439 20875805 -99408507 + MTD LTR MaLR 17 419 0 4 744 227 348 123 16 chr13 20877250 20877437 -99406875 - MLT1H1 LTR MaLR -7 548 342 4 744 849 274 98 61 chr13 20877693 20878089 -99406223 + MER67A LTR ERV1 1 411 -132 4 744 261 277 15 0 chr13 20878099 20878164 -99406148 + ID4 SINE ID 3 68 -15 4 744 420 37 0 0 chr13 20878189 20878243 -99406069 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 744 597 28 0 0 chr13 20878392 20878463 -99405849 + (TC)n Simple_repeat Simple_repeat 2 72 0 4 744 882 74 82 0 chr13 20878463 20878585 -99405727 - B1_Mm SINE Alu -1 146 15 4 744 566 263 52 19 chr13 20878464 20878619 -99405693 - B4 SINE B4 -68 224 65 4 744 326 295 206 33 chr13 20880672 20880911 -99403401 + MLT1J LTR MaLR 33 341 -171 4 744 523 289 39 107 chr13 20881533 20881843 -99402469 - B4A SINE B4 -2 290 2 4 744 577 256 8 0 chr13 20882442 20882575 -99401737 - L1MA5 LINE L1 -5 6295 6162 4 744 576 211 226 12 chr13 20882690 20882858 -99401454 + B3 SINE B2 2 205 -11 4 744 351 0 0 0 chr13 20882873 20882912 -99401400 + (TAGA)n Simple_repeat Simple_repeat 1 39 0 4 744 2079 176 24 75 chr13 20884470 20884937 -99399375 - RLTR31A_Mm LTR ERVK -137 447 5 4 744 180 0 0 0 chr13 20885035 20885055 -99399257 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 744 351 0 0 0 chr13 20886106 20886145 -99398167 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 744 382 277 25 82 chr13 20886472 20886594 -99397718 + PB1D7 SINE Alu 6 120 0 4 744 687 25 0 0 chr13 20886702 20886783 -99397529 + (TCC)n Simple_repeat Simple_repeat 2 82 0 4 744 187 343 147 0 chr13 20886832 20886934 -99397378 + MIRb SINE MIR 131 247 -21 4 744 2380 161 44 15 chr13 20887113 20887522 -99396790 + MTC LTR MaLR 1 421 0 4 744 408 40 0 0 chr13 20888352 20888402 -99395910 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 744 215 31 31 0 chr13 20889744 20889776 -99394536 + (CAA)n Simple_repeat Simple_repeat 2 34 0 4 744 260 323 0 31 chr13 20890775 20890859 -99393453 + RSINE1 SINE B4 28 109 -56 4 744 1789 139 113 32 chr13 20890859 20891068 -99393244 - RMER17C LTR ERVK 0 410 185 4 744 507 45 0 0 chr13 20891068 20891134 -99393178 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 744 1789 139 113 32 chr13 20891134 20891303 -99393009 - RMER17C LTR ERVK -226 184 1 4 744 260 323 0 31 chr13 20891303 20891314 -99392998 + RSINE1 SINE B4 110 120 -45 4 744 24 0 0 0 chr13 20891376 20891400 -99392912 + AT_rich Low_complexity Low_complexity 1 24 0 4 744 504 325 12 25 chr13 20891412 20891573 -99392739 - MLT1E1A LTR MaLR -5 675 517 4 744 1061 214 105 34 chr13 20891576 20891871 -99392441 - ORR1C2 LTR MaLR 0 384 69 4 744 247 239 120 23 chr13 20892105 20892217 -99392095 - MLT1E1A LTR MaLR -377 277 151 4 744 1619 187 139 17 chr13 20892524 20892883 -99391429 + MTB_Mm LTR MaLR 1 403 -4 4 744 683 151 47 23 chr13 20893015 20893144 -99391168 + RMER5 LTR ERV1 1 132 -402 4 744 335 327 93 35 chr13 20893226 20893806 -99390506 + L1MEf LINE L1 886 1499 -4743 4 744 576 206 57 26 chr13 20893904 20894091 -99390221 + B3A SINE B2 1 191 -4 4 744 613 344 65 4 chr13 20894111 20894342 -99389970 + B4A SINE B4 34 278 -14 4 744 247 275 12 12 chr13 20894349 20894430 -99389882 + (CATA)n Simple_repeat Simple_repeat 4 84 0 4 744 762 141 0 0 chr13 20894869 20894997 -99389315 + (AGGGGG)n Simple_repeat Simple_repeat 1 128 0 4 744 252 306 67 0 chr13 20895133 20895326 -99388986 + L1MEf LINE L1 2205 2410 -3736 4 744 261 0 0 0 chr13 20895625 20895654 -99388658 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 744 395 228 13 0 chr13 20895657 20895736 -99388576 - B4 SINE B4 -212 80 1 4 744 630 337 77 18 chr13 20895831 20896272 -99388040 - Lx8 LINE L1 -113 7360 6894 4 744 1807 239 110 74 chr13 20896272 20896854 -99387458 - RMER20B LTR ERVK -24 603 1 4 744 747 306 9 28 chr13 20896908 20897217 -99387095 - Lx8 LINE L1 -1090 6554 6208 4 744 239 95 0 45 chr13 20897217 20897261 -99387051 + (CATATA)n Simple_repeat Simple_repeat 6 47 0 4 744 3439 264 73 49 chr13 20897308 20898779 -99385533 - Lx8 LINE L1 -1306 6167 4674 4 744 234 0 0 0 chr13 20898779 20898805 -99385507 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 4 744 3439 257 78 58 chr13 20898805 20899087 -99385225 - Lx8 LINE L1 -1207 4673 4358 4 744 244 233 168 24 chr13 20899248 20899415 -99384897 + L1MEf LINE L1 2966 3156 -2990 4 744 241 306 89 70 chr13 20899564 20899891 -99384421 - RMER17C LTR ERVK -12 398 66 4 744 302 270 33 26 chr13 20900006 20900158 -99384154 + L1MEf LINE L1 3347 3499 -2647 4 744 375 325 61 96 chr13 20900160 20900453 -99383859 - MLT1B LTR MaLR 0 390 108 4 744 433 295 128 69 chr13 20900528 20901077 -99383235 + L1MEf LINE L1 3528 4108 -2038 4 744 939 294 117 41 chr13 20901175 20901999 -99382313 + Charlie2a DNA MER1_type 1777 2662 -199 4 744 271 329 60 20 chr13 20902103 20902252 -99382060 - Tigger16a DNA Tigger -34 899 745 4 744 1407 45 0 16 chr13 20902346 20902528 -99381784 + B2_Mm2 SINE B2 2 180 -15 4 744 255 321 164 87 chr13 20902696 20903006 -99381306 - MLT1H LTR MaLR -61 488 155 4 744 773 178 111 53 chr13 20903463 20903689 -99380623 - RMER1C Other Other -1 1341 1103 4 744 728 296 169 23 chr13 20905049 20905309 -99379003 + MER2 DNA MER2_type 1 308 -37 5 744 189 0 0 0 chr13 20905309 20905330 -99378982 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 5 744 728 296 169 23 chr13 20905330 20905370 -99378942 + MER2 DNA MER2_type 309 345 0 5 744 213 349 11 11 chr13 20906437 20906524 -99377788 - MIRb SINE MIR -168 100 14 5 744 222 293 193 50 chr13 20907749 20907889 -99376423 - MIRb SINE MIR -64 204 45 5 744 182 400 9 0 chr13 20908116 20908231 -99376081 - MIRm SINE MIR -160 116 1 5 744 408 100 38 0 chr13 20909879 20909959 -99374353 + (TC)n Simple_repeat Simple_repeat 2 84 0 5 744 1345 34 102 0 chr13 20910054 20910231 -99374081 - B2_Mm2 SINE B2 0 195 1 5 744 253 300 61 88 chr13 20910341 20910670 -99373642 - L1MC5 LINE L1 -919 7042 6723 5 744 224 213 21 0 chr13 20910799 20910846 -99373466 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 744 1175 190 0 9 chr13 20910908 20911126 -99373186 + B3 SINE B2 1 216 0 5 744 24 0 0 0 chr13 20911133 20911157 -99373155 + AT_rich Low_complexity Low_complexity 1 24 0 5 744 4793 128 87 18 chr13 20911641 20912478 -99371834 - RMER17A2 LTR ERVK -11 895 1 5 744 306 0 0 0 chr13 20913207 20913241 -99371071 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 744 429 212 12 12 chr13 20913805 20913886 -99370426 + RSINE1 SINE B4 2 82 -83 5 744 540 0 0 0 chr13 20915094 20915154 -99369158 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 744 241 324 0 14 chr13 20915156 20915228 -99369084 - ID4 SINE ID -11 72 2 5 744 668 291 0 0 chr13 20916254 20916402 -99367910 - B1_Mur3 SINE Alu 0 149 2 5 744 194 337 111 10 chr13 20916409 20916508 -99367804 - MIR SINE MIR -65 143 35 5 744 252 256 69 8 chr13 20916566 20916696 -99367616 - L1MB7 LINE L1 -1 6177 6040 5 744 1464 164 125 69 chr13 20916766 20916936 -99367376 - ORR1C2 LTR MaLR -3 381 173 5 744 621 0 0 0 chr13 20916936 20917005 -99367307 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 744 1464 164 125 69 chr13 20917005 20917195 -99367117 - ORR1C2 LTR MaLR -212 172 1 5 744 272 346 8 0 chr13 20917215 20917345 -99366967 - L1MB7 LINE L1 -194 5990 5860 5 744 284 280 42 67 chr13 20917528 20917736 -99366576 - L1MB7 LINE L1 -538 5640 5425 5 744 24 32 0 0 chr13 20917794 20917825 -99366487 + AT_rich Low_complexity Low_complexity 1 31 0 5 744 1669 166 26 153 chr13 20918229 20918411 -99365901 + RMER10B LTR ERVL 1 192 -206 5 744 989 144 6 0 chr13 20918411 20918585 -99365727 + (TCC)n Simple_repeat Simple_repeat 1 175 0 5 744 1669 166 26 153 chr13 20918585 20918858 -99365454 + RMER10B LTR ERVL 193 398 0 5 744 3347 155 71 14 chr13 20918987 20919636 -99364676 + RLTR25B LTR ERVK 1 691 -412 5 744 235 327 19 37 chr13 20919544 20919652 -99364660 + ORR1D-int LTR MaLR 556 661 -709 5 744 1649 161 151 30 chr13 20920213 20920585 -99363727 + RLTR25B LTR ERVK 612 1028 0 5 744 1885 166 126 0 chr13 20920892 20921064 -99363248 + ORR1B1 LTR MaLR 1 196 -198 5 744 3647 186 108 39 chr13 20921064 20921960 -99362352 + RMER17B LTR ERVK 1 958 0 5 744 1885 166 126 0 chr13 20921960 20922137 -99362175 + ORR1B1 LTR MaLR 197 393 -1 5 744 399 261 124 26 chr13 20922542 20922735 -99361577 - MER57A-int LTR ERV1 -5963 224 13 5 744 314 315 222 11 chr13 20922839 20923019 -99361293 - MER57D LTR ERV1 -48 363 146 5 744 8954 87 19 2 chr13 20923181 20924546 -99359766 - L1_Mus3 LINE L1 -6 6632 5244 5 744 425 99 0 12 chr13 20924546 20924628 -99359684 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 5 744 8954 107 12 2 chr13 20924628 20925376 -99358936 - L1_Mus3 LINE L1 -640 5243 4488 5 744 1348 232 30 53 chr13 20925416 20925692 -99358620 - ORR1D2 LTR MaLR 0 370 97 5 744 1817 161 105 43 chr13 20925692 20926063 -99358249 - ORR1B1 LTR MaLR 0 394 1 5 744 1348 232 30 53 chr13 20926063 20926123 -99358189 - ORR1D2 LTR MaLR -274 96 42 5 744 823 263 104 46 chr13 20926179 20926574 -99357738 - L1M4 LINE L1 -1254 4892 4475 5 744 516 256 18 9 chr13 20926605 20926745 -99357567 - B1F SINE Alu -7 142 1 5 744 213 318 15 0 chr13 20926687 20926753 -99357559 - B4A SINE B4 -148 144 78 5 744 906 289 156 36 chr13 20926756 20927666 -99356646 - L1M4 LINE L1 -1679 4467 3449 5 744 339 236 53 11 chr13 20927733 20927827 -99356485 - MTC LTR MaLR -321 100 3 5 744 264 242 23 39 chr13 20928143 20928272 -99356040 + A-rich Low_complexity Low_complexity 5 131 0 5 744 1435 256 67 2 chr13 20928313 20928743 -99355569 - Lx7 LINE L1 -396 7300 6843 5 744 5113 228 48 73 chr13 20928747 20930371 -99353941 - Lx7 LINE L1 -1080 6616 5039 5 744 3338 31 13 0 chr13 20930371 20930762 -99353550 + MTA_Mm LTR MaLR 1 396 0 5 744 5113 219 49 51 chr13 20930762 20931492 -99352820 - Lx7 LINE L1 -842 5038 4310 5 744 617 245 29 0 chr13 20931636 20931775 -99352537 - B3 SINE B2 -1 215 73 5 744 423 0 0 0 chr13 20933078 20933125 -99351187 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 744 576 273 31 49 chr13 20933136 20933298 -99351014 + RSINE1 SINE B4 7 165 0 5 744 188 333 177 0 chr13 20934003 20934144 -99350168 + L2 LINE L2 2901 3066 -353 5 744 297 0 0 0 chr13 20934276 20934309 -99350003 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 744 4574 111 70 0 chr13 20934382 20935064 -99349248 + RMER19A LTR ERVK 8 737 0 5 744 213 281 16 0 chr13 20935178 20935242 -99349070 + GA-rich Low_complexity Low_complexity 3 67 0 5 744 522 325 107 24 chr13 20935780 20936117 -99348195 - MLT1A0 LTR MaLR 0 365 1 5 744 245 233 0 52 chr13 20936404 20936481 -99347831 + MamRep4096 DNA hAT? 136 208 -218 5 744 481 264 58 0 chr13 20936485 20936606 -99347706 + B1_Mur1 SINE Alu 1 128 -21 5 744 439 235 19 47 chr13 20936630 20936737 -99347575 + U1 snRNA snRNA 13 116 -49 5 744 3363 230 62 50 chr13 20936818 20938207 -99346105 + RMER1B Other Other 36 952 -114 5 744 450 0 0 0 chr13 20938207 20938257 -99346055 + (TTTTC)n Simple_repeat Simple_repeat 2 51 0 5 744 3363 184 26 15 chr13 20938257 20938361 -99345951 + RMER1B Other Other 953 1055 -11 5 744 222 37 0 0 chr13 20938385 20938412 -99345900 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 744 486 0 0 0 chr13 20938412 20938465 -99345847 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 744 985 205 41 5 chr13 20938569 20938789 -99345523 - Lx7 LINE L1 -683 7013 6786 5 744 1117 293 55 27 chr13 20938908 20939268 -99345044 + L1M2 LINE L1 2243 2659 -3484 5 744 243 0 0 0 chr13 20939268 20939295 -99345017 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 744 1117 327 67 26 chr13 20939295 20940181 -99344131 + L1M2 LINE L1 2660 3569 -2574 5 744 2805 309 103 22 chr13 20940202 20941298 -99343014 - MTEa-int LTR MaLR -395 1185 1 5 744 725 222 96 50 chr13 20941298 20941516 -99342796 - MTEa LTR MaLR 0 379 152 5 744 1024 100 0 0 chr13 20941769 20941909 -99342403 + B1_Mus1 SINE Alu 2 141 -7 5 744 635 102 17 0 chr13 20941909 20942027 -99342285 + (CAAAA)n Simple_repeat Simple_repeat 1 120 0 5 744 1145 283 39 88 chr13 20942075 20942532 -99341780 - RMER4A LTR ERVK -14 452 18 5 744 279 0 0 0 chr13 20943678 20943709 -99340603 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 744 229 217 22 0 chr13 20943907 20943953 -99340359 + GA-rich Low_complexity Low_complexity 2 48 0 5 744 554 0 15 0 chr13 20945955 20946021 -99338291 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 5 744 416 278 79 0 chr13 20946076 20946202 -99338110 + Tigger5 DNA MER2_type 173 308 -2098 5 744 361 309 29 0 chr13 20946203 20946339 -99337973 + Tigger5 DNA MER2_type 2186 2325 -81 5 744 211 273 204 0 chr13 20946442 20946530 -99337782 - MIR SINE MIR -25 237 132 5 744 294 302 92 28 chr13 20948273 20948491 -99335821 - L1MD3 LINE L1 -42 7953 7722 5 744 382 121 0 33 chr13 20948498 20948558 -99335754 - RMER1C Other Other -134 1208 1151 5 744 675 244 13 64 chr13 20948719 20948953 -99335359 - L1MD3 LINE L1 -1123 6872 6681 5 744 201 74 0 0 chr13 20949661 20949688 -99334624 + (T)n Simple_repeat Simple_repeat 1 27 0 5 744 4465 46 9 2 chr13 20949690 20950236 -99334076 - L1Md_F2 LINE L1 -4 6578 6029 5 744 234 0 0 0 chr13 20951741 20951767 -99332545 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 744 36038 35 1 0 chr13 20952566 20958017 -99326295 + L1Md_T LINE L1 38 5589 -297 5 744 9140 5 0 2 chr13 20958017 20959015 -99325297 + L1Md_T LINE L1 5590 6585 0 5 744 38316 17 1 7 chr13 20959568 20964776 -99319536 + L1Md_T LINE L1 414 5586 -297 5 744 8649 23 0 5 chr13 20964776 20965777 -99318535 + L1Md_T LINE L1 5587 6582 0 5 11 38738 12 2 7 chr13 20966329 20971535 -99312777 + L1Md_A LINE L1 414 5586 -297 5 745 8957 15 0 0 chr13 20971535 20972531 -99311781 + L1Md_A LINE L1 5587 6582 0 5 745 10475 8 1 0 chr13 20972531 20973689 -99310623 + L1Md_A LINE L1 4428 5586 -297 5 745 8937 17 0 0 chr13 20973689 20974685 -99309627 + L1Md_A LINE L1 5587 6582 0 5 745 705 152 68 0 chr13 20975667 20975799 -99308513 + B1_Mur3 SINE Alu 9 149 0 5 745 186 298 130 53 chr13 20976390 20976521 -99307791 + L2a LINE L2 3279 3419 -7 5 745 656 324 72 59 chr13 20976554 20976758 -99307554 + MLT1D LTR MaLR 22 226 -279 5 745 700 309 100 19 chr13 20976758 20977028 -99307284 + B4 SINE B4 1 292 0 5 745 656 324 72 59 chr13 20977028 20977282 -99307030 + MLT1D LTR MaLR 227 486 -19 5 745 468 0 0 0 chr13 20977283 20977335 -99306977 + (GAAA)n Simple_repeat Simple_repeat 3 54 0 5 745 308 227 0 11 chr13 20977337 20977365 -99306947 + polypurine Low_complexity Low_complexity 1 28 0 5 745 1163 102 0 6 chr13 20977365 20977543 -99306769 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 5 745 308 227 0 11 chr13 20977543 20977603 -99306709 + polypurine Low_complexity Low_complexity 29 88 0 5 745 648 0 0 0 chr13 20977603 20977675 -99306637 + (GGAA)n Simple_repeat Simple_repeat 2 73 0 5 745 446 285 72 96 chr13 20977678 20977845 -99306467 + RSINE1 SINE B4 3 165 0 5 745 200 182 0 0 chr13 20977947 20977980 -99306332 + (CAA)n Simple_repeat Simple_repeat 3 35 0 5 745 481 250 18 9 chr13 20978304 20978417 -99305895 + RSINE1 SINE B4 1 114 -51 5 745 654 47 0 0 chr13 20978417 20978503 -99305809 + (CA)n Simple_repeat Simple_repeat 2 87 0 5 745 1118 240 78 23 chr13 20978631 20978938 -99305374 - MTEa LTR MaLR -53 326 3 5 745 254 294 93 47 chr13 20979608 20979715 -99304597 - MLT1B LTR MaLR -11 379 268 5 745 534 220 0 0 chr13 20979797 20979906 -99304406 - PB1D10 SINE Alu -2 115 7 5 745 251 218 120 65 chr13 20979936 20980044 -99304268 - MLT1B LTR MaLR -241 124 11 5 745 198 0 0 0 chr13 20980290 20980312 -99304000 + (GA)n Simple_repeat Simple_repeat 2 23 0 5 745 225 65 0 0 chr13 20980846 20980877 -99303435 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 745 246 296 37 12 chr13 20980952 20981034 -99303278 + MIRc SINE MIR 90 173 -95 5 745 183 307 120 14 chr13 20981456 20981598 -99302714 + MIRc SINE MIR 3 159 -109 5 745 314 293 62 39 chr13 20981778 20981906 -99302406 - MIRc SINE MIR -112 156 26 5 745 795 321 112 29 chr13 20982194 20982614 -99301698 - MLT1C LTR MaLR -10 457 3 5 745 32 26 0 0 chr13 20983470 20983509 -99300803 + AT_rich Low_complexity Low_complexity 1 39 0 5 745 353 252 0 20 chr13 20983528 20983633 -99300679 - B3A SINE B2 -99 96 1 6 745 4594 225 79 46 chr13 20983686 20985020 -99299292 - Lx9 LINE L1 0 7644 6267 6 745 482 180 27 99 chr13 20985129 20985240 -99299072 - PB1D9 SINE Alu -13 107 5 6 745 5125 116 21 22 chr13 20986572 20987468 -99296844 + RMER17A2 LTR ERVK 1 895 -11 6 745 1902 325 91 23 chr13 20987887 20989226 -99295086 - L1_Mur3 LINE L1 -54 5826 4397 6 745 247 237 31 0 chr13 20989697 20989794 -99294518 + CT-rich Low_complexity Low_complexity 5 104 0 6 745 324 241 0 0 chr13 20991545 20991598 -99292714 + polypyrimidine Low_complexity Low_complexity 35 87 0 6 745 1565 0 0 11 chr13 20991598 20991780 -99292532 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 6 745 324 241 0 0 chr13 20991780 20991813 -99292499 + polypyrimidine Low_complexity Low_complexity 2 34 0 6 745 1131 94 0 16 chr13 20991813 20991996 -99292316 + (TCC)n Simple_repeat Simple_repeat 1 180 0 6 745 327 241 0 0 chr13 20991998 20992081 -99292231 + CT-rich Low_complexity Low_complexity 3 85 0 6 745 719 265 5 42 chr13 20994160 20994349 -99289963 + B3A SINE B2 1 182 -16 6 745 181 274 160 53 chr13 20994557 20994688 -99289624 - MIR SINE MIR -70 192 48 6 745 464 59 15 0 chr13 20995004 20995072 -99289240 + (TC)n Simple_repeat Simple_repeat 2 70 0 6 745 336 24 0 0 chr13 20995072 20995113 -99289199 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 745 322 238 45 10 chr13 20998752 20998882 -99285430 - ORR1E LTR MaLR -238 136 1 6 745 1214 27 0 33 chr13 20998986 20998998 -99285314 - B1_Mm SINE Alu 0 147 139 6 745 189 74 0 0 chr13 20998998 20999025 -99285287 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 745 1214 27 0 33 chr13 20999025 20999164 -99285148 - B1_Mm SINE Alu -9 138 1 6 745 573 273 154 28 chr13 20999523 20999881 -99284431 - MLT1C LTR MaLR -62 405 3 6 745 2000 176 41 16 chr13 21001238 21001607 -99282705 - ORR1C1 LTR MaLR 0 378 1 1 745 343 354 0 6 chr13 21002627 21002792 -99281520 + (CA)n Simple_repeat Simple_repeat 2 165 0 2 745 741 326 12 71 chr13 21004361 21004607 -99279705 - Arthur1C DNA Tip100 -27 336 102 3 745 1039 168 131 10 chr13 21004607 21004805 -99279507 - URR1A DNA MER1_type 0 226 5 4 745 741 326 12 71 chr13 21004805 21004895 -99279417 - Arthur1C DNA Tip100 -262 101 20 3 745 839 192 5 0 chr13 21005507 21005895 -99278417 + (TG)n Simple_repeat Simple_repeat 1 390 0 5 745 261 219 25 0 chr13 21005909 21006028 -99278284 + (TG)n Simple_repeat Simple_repeat 1 122 0 5 745 304 348 42 0 chr13 21006289 21006407 -99277905 - MER20 DNA MER1_type -65 154 32 6 745 27 81 0 0 chr13 21007660 21007722 -99276590 + AT_rich Low_complexity Low_complexity 1 62 0 7 745 215 320 0 0 chr13 21007751 21007801 -99276511 + Alu_5 SINE Alu 2 51 -124 8 745 294 291 12 48 chr13 21007842 21007925 -99276387 + ID4 SINE ID 2 81 -2 9 745 275 341 0 0 chr13 21007957 21008039 -99276273 + ID4_ SINE ID 1 82 -1 1 745 186 43 0 0 chr13 21009155 21009178 -99275134 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 1 745 270 143 0 0 chr13 21009495 21009558 -99274754 + (T)n Simple_repeat Simple_repeat 1 63 0 1 745 915 295 59 13 chr13 21009725 21010031 -99274281 + MER2 DNA MER2_type 24 343 -2 1 745 264 195 205 12 chr13 21010622 21010705 -99273607 + RMER20B LTR ERVK 504 602 -25 1 745 2727 253 70 87 chr13 21010704 21011650 -99272662 + MTD-int LTR MaLR 212 1098 0 1 745 1614 243 64 44 chr13 21011650 21011842 -99272470 + MTD LTR MaLR 1 189 -230 1 745 1071 149 159 5 chr13 21011842 21012037 -99272275 - URR1A DNA MER1_type -1 225 1 1 745 1614 243 64 44 chr13 21012037 21012253 -99272059 + MTD LTR MaLR 190 417 -2 1 745 587 231 98 36 chr13 21012257 21012481 -99271831 - MER45B DNA Tip100 -90 950 713 1 745 263 263 51 0 chr13 21013123 21013195 -99271117 - MER45B DNA Tip100 -953 87 7 1 745 933 246 5 59 chr13 21013614 21013834 -99270478 + B3 SINE B2 1 208 -8 1 745 387 320 25 0 chr13 21014767 21014889 -99269423 + B4A SINE B4 42 166 -126 1 745 1576 279 92 162 chr13 21014896 21016233 -99268079 + Lx8 LINE L1 3444 4717 -1426 2 745 1162 75 6 6 chr13 21016233 21016393 -99267919 + B2_Mm1a SINE B2 1 160 -33 2 745 387 0 0 0 chr13 21016393 21016436 -99267876 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 2 745 1576 278 92 156 chr13 21016436 21017621 -99266691 + Lx8 LINE L1 4662 5917 -1556 2 745 644 220 17 0 chr13 21018374 21018492 -99265820 + B1_Mur2 SINE Alu 7 126 -23 2 745 348 288 30 60 chr13 21018492 21018507 -99265805 + ID_B1 SINE B4 88 216 -8 2 745 1061 207 25 0 chr13 21019209 21019407 -99264905 + B3 SINE B2 4 206 -10 2 745 23 0 0 0 chr13 21019426 21019449 -99264863 + AT_rich Low_complexity Low_complexity 1 23 0 2 745 3466 18 42 0 chr13 21019550 21019930 -99264382 + MTA_Mm LTR MaLR 1 396 0 2 745 258 302 87 56 chr13 21021421 21021547 -99262765 - ORR1E LTR MaLR -209 150 21 2 745 728 284 19 19 chr13 21021557 21021765 -99262547 - Lx9 LINE L1 -1089 6555 6348 2 745 282 29 0 0 chr13 21021964 21021999 -99262313 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 745 1295 28 0 0 chr13 21022127 21022268 -99262044 + B1_Mm SINE Alu 1 141 -6 3 745 234 0 0 0 chr13 21022271 21022297 -99262015 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 3 745 706 312 20 5 chr13 21022347 21022550 -99261762 - MER58A DNA MER1_type -18 206 1 3 745 382 267 24 158 chr13 21024483 21024596 -99259716 + L1M3 LINE L1 5378 5477 -694 3 745 2804 99 7 39 chr13 21024596 21025005 -99259307 + Lx LINE L1 6258 6653 -1 3 745 382 267 24 158 chr13 21025005 21025100 -99259212 + L1M3 LINE L1 5478 5558 -613 3 745 1756 274 112 47 chr13 21025351 21026011 -99258301 + Lx8 LINE L1 6737 7439 -34 3 745 180 77 0 0 chr13 21026011 21026037 -99258275 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 745 351 0 0 0 chr13 21026037 21026076 -99258236 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 745 555 229 69 7 chr13 21026113 21026258 -99258054 - MTD LTR MaLR -265 154 1 3 745 225 278 0 0 chr13 21026522 21026576 -99257736 + B2_Mm2 SINE B2 4 57 -138 4 745 1089 50 62 3 chr13 21026578 21027166 -99257146 + (TAGA)n Simple_repeat Simple_repeat 1 622 0 4 745 913 42 60 0 chr13 21027192 21027358 -99256954 + (TAGA)n Simple_repeat Simple_repeat 2 177 0 4 745 180 0 0 0 chr13 21027363 21027383 -99256929 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 745 2465 123 36 24 chr13 21028046 21028461 -99255851 + BGLII_Mus LTR ERVK 2 421 -1 4 745 1064 100 6 0 chr13 21028545 21028705 -99255607 + (GAAA)n Simple_repeat Simple_repeat 2 162 0 4 745 183 184 0 0 chr13 21028905 21028943 -99255369 + CT-rich Low_complexity Low_complexity 1 38 0 4 745 225 0 0 0 chr13 21028943 21028968 -99255344 + (TGG)n Simple_repeat Simple_repeat 1 25 0 4 745 237 236 211 0 chr13 21028994 21029084 -99255228 - B1F SINE Alu -11 106 1 4 745 27 0 0 0 chr13 21030161 21030188 -99254124 + AT_rich Low_complexity Low_complexity 1 27 0 4 745 579 15 0 0 chr13 21030654 21030722 -99253590 + (TGGGGG)n Simple_repeat Simple_repeat 5 72 0 4 745 291 238 132 50 chr13 21034308 21034458 -99249854 - MIR SINE MIR -98 178 9 5 745 568 288 58 137 chr13 21034892 21035411 -99248901 + RLTR18 LTR ERVK 135 612 -4 5 745 912 140 0 35 chr13 21035477 21035618 -99248694 + MTD LTR MaLR 161 296 -123 5 745 1652 169 4 4 chr13 21035715 21035738 -99248574 - Lx6 LINE L1 -695 6765 6742 5 745 243 0 0 0 chr13 21035738 21035765 -99248547 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 745 1652 169 4 4 chr13 21035765 21036008 -99248304 - Lx6 LINE L1 -719 6741 6499 5 745 647 175 168 0 chr13 21036010 21036147 -99248165 - RLTR24 LTR ERV1 0 529 370 5 745 1363 184 64 112 chr13 21036638 21037030 -99247282 - RLTR24 LTR ERV1 -156 373 1 5 745 1701 181 14 0 chr13 21037031 21037318 -99246994 - Lx6 LINE L1 -961 6499 6209 5 745 431 317 96 76 chr13 21037442 21037743 -99246569 - MLT1A LTR MaLR -67 307 1 5 745 842 169 241 0 chr13 21038267 21038433 -99245879 - B3 SINE B2 -9 207 2 5 745 23 33 0 0 chr13 21038441 21038471 -99245841 + AT_rich Low_complexity Low_complexity 1 30 0 5 745 1413 118 0 0 chr13 21038476 21038662 -99245650 + B2_Mm2 SINE B2 1 186 -9 5 745 1682 211 105 32 chr13 21038788 21039161 -99245151 + MTD LTR MaLR 6 405 -14 6 745 195 42 0 0 chr13 21039199 21039223 -99245089 + (TAA)n Simple_repeat Simple_repeat 2 25 0 6 745 2920 101 4 141 chr13 21039225 21039743 -99244569 + L1_Mus4 LINE L1 6188 6634 -2 6 745 1319 262 8 20 chr13 21041087 21041438 -99242874 - Lx8 LINE L1 -137 7336 6990 6 745 23997 140 30 34 chr13 21041417 21045732 -99238580 - Lx2 LINE L1 0 6997 2571 6 745 207 0 0 0 chr13 21045732 21045755 -99238557 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 745 772 37 176 0 chr13 21045763 21045871 -99238441 - B1_Mm SINE Alu 0 147 21 6 745 23997 153 36 49 chr13 21045871 21045996 -99238316 - Lx2 LINE L1 -3313 2564 2473 6 745 1207 68 0 13 chr13 21045996 21046145 -99238167 + B1_Mus1 SINE Alu 1 147 -1 6 745 23997 129 30 43 chr13 21046145 21047820 -99236492 - Lx2 LINE L1 -3411 2472 812 6 745 22 56 0 0 chr13 21047978 21048014 -99236298 + AT_rich Low_complexity Low_complexity 1 36 0 6 745 687 290 77 5 chr13 21048017 21048211 -99236101 + ORR1E LTR MaLR 1 208 -151 6 745 632 299 135 5 chr13 21048462 21048647 -99235665 + B4A SINE B4 11 219 -73 7 745 315 0 0 0 chr13 21048650 21048685 -99235627 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 745 220 259 37 0 chr13 21048797 21048851 -99235461 + B4A SINE B4 90 145 -147 7 745 220 320 93 0 chr13 21048798 21048895 -99235417 + PB1D10 SINE Alu 6 111 -6 7 745 634 310 130 70 chr13 21049448 21049716 -99234596 + Charlie1a DNA MER1_type 1 281 -1174 7 745 918 221 133 0 chr13 21049716 21049911 -99234401 + ID_B1 SINE B4 2 222 -2 7 745 634 310 130 70 chr13 21049911 21050111 -99234201 + Charlie1a DNA MER1_type 282 497 -958 7 745 565 288 65 0 chr13 21050123 21050262 -99234050 + B1_Mur1 SINE Alu 2 149 0 7 745 1779 279 126 32 chr13 21050256 21051149 -99233163 + Charlie1a DNA MER1_type 474 1450 -5 7 745 191 174 43 0 chr13 21051538 21051584 -99232728 + CT-rich Low_complexity Low_complexity 1 48 0 7 745 1328 84 0 3 chr13 21051584 21051944 -99232368 + (TTTC)n Simple_repeat Simple_repeat 1 358 0 7 745 321 26 0 0 chr13 21051944 21051982 -99232330 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 7 745 8637 24 1 0 chr13 21052235 21053766 -99230546 - L1Md_T LINE L1 0 6582 5051 8 745 301 281 130 3 chr13 21054070 21054305 -99230007 - L1M5 LINE L1 -363 5761 5484 8 745 259 215 124 20 chr13 21054359 21054458 -99229854 - L1M5 LINE L1 -714 5480 5370 8 745 196 365 0 0 chr13 21054673 21054725 -99229587 + L2a LINE L2 3355 3406 -20 8 745 607 293 25 25 chr13 21054749 21054945 -99229367 + B3A SINE B2 2 197 -1 8 745 198 276 17 0 chr13 21054992 21055050 -99229262 - MIRc SINE MIR -11 257 199 8 745 398 240 20 50 chr13 21055601 21055702 -99228610 - PB1D9 SINE Alu -5 115 18 8 745 234 271 34 0 chr13 21055979 21056038 -99228274 - Lx8 LINE L1 -153 7320 7260 8 745 291 190 0 0 chr13 21056065 21056123 -99228189 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 8 745 545 314 43 19 chr13 21056166 21056374 -99227938 - Lx7 LINE L1 -585 7111 6899 8 745 548 245 104 23 chr13 21056389 21056648 -99227664 - L1_Rod LINE L1 -459 5388 5109 8 745 723 280 18 0 chr13 21057888 21058106 -99226206 - Lx8 LINE L1 -1013 6460 6239 8 745 276 299 40 28 chr13 21058182 21058406 -99225906 + Lx8 LINE L1 7171 7525 -119 9 745 249 194 7 43 chr13 21058835 21058936 -99225376 - Lx7 LINE L1 -33 7427 7364 9 745 456 123 0 0 chr13 21059044 21059117 -99225195 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 9 745 1610 260 36 28 chr13 21059118 21059621 -99224691 - Lx7 LINE L1 -360 7336 6830 9 745 21 0 0 0 chr13 21060743 21060764 -99223548 + AT_rich Low_complexity Low_complexity 1 21 0 9 745 640 329 124 29 chr13 21060933 21061384 -99222928 + HAL1 LINE L1 1 494 -2013 9 745 799 315 67 41 chr13 21061508 21061823 -99222489 - MTE2a LTR MaLR 0 379 57 9 745 474 282 81 25 chr13 21062003 21062152 -99222160 - B3 SINE B2 0 216 59 9 745 696 255 14 0 chr13 21062152 21062297 -99222015 + B1_Mur3 SINE Alu 3 149 0 9 745 23 0 0 0 chr13 21062305 21062328 -99221984 + AT_rich Low_complexity Low_complexity 1 23 0 9 745 363 313 82 0 chr13 21062330 21062525 -99221787 + HAL1 LINE L1 1182 1392 -1115 9 745 6618 89 5 0 chr13 21062733 21063686 -99220626 - L1_Mus1 LINE L1 -190 5693 4736 9 745 6662 64 8 1 chr13 21063686 21064579 -99219733 + L1_Mus1 LINE L1 5669 6567 0 9 745 192 40 0 0 chr13 21064602 21064627 -99219685 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 745 234 128 0 0 chr13 21064755 21064794 -99219518 + (TCC)n Simple_repeat Simple_repeat 2 40 0 1 745 5947 110 31 46 chr13 21064810 21065824 -99218488 - Lx3C LINE L1 -7 6969 5972 1 745 3949 228 82 77 chr13 21066001 21066764 -99217548 - Lx9 LINE L1 -7 7637 6917 1 745 288 0 0 0 chr13 21066764 21066796 -99217516 + (TC)n Simple_repeat Simple_repeat 2 33 0 1 745 848 111 0 6 chr13 21066796 21066958 -99217354 + (TA)n Simple_repeat Simple_repeat 1 162 0 1 745 3949 228 82 77 chr13 21066958 21067727 -99216585 - Lx9 LINE L1 -728 6916 6098 1 745 6204 237 46 61 chr13 21067763 21068814 -99215498 - Lx9 LINE L1 -97 5750 4707 1 745 342 0 0 0 chr13 21068814 21068852 -99215460 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 745 6204 237 46 61 chr13 21068852 21070002 -99214310 - Lx9 LINE L1 -1141 4706 3582 1 745 236 291 105 67 chr13 21070265 21070475 -99213837 - L4 LINE RTE 0 2029 1812 1 745 367 343 114 78 chr13 21070525 21070885 -99213427 - MLT1J LTR MaLR -54 458 86 1 745 224 331 17 25 chr13 21072281 21072416 -99211896 - MIRc SINE MIR -61 201 61 1 745 185 302 82 20 chr13 21072765 21072863 -99211449 + L3 LINE CR1 3966 4069 -420 1 745 1087 284 40 17 chr13 21075696 21076101 -99208211 + L1MB1 LINE L1 5430 5843 -325 1 745 232 303 0 0 chr13 21076113 21076179 -99208133 + L1MB1 LINE L1 5930 5995 -173 1 745 1195 22 0 0 chr13 21076215 21076351 -99207961 - B1_Mus2 SINE Alu -11 136 1 1 745 360 335 150 57 chr13 21076351 21076718 -99207594 - Tigger11a DNA MER2_type -123 612 212 1 745 234 192 0 0 chr13 21077137 21077189 -99207123 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 745 2747 130 143 31 chr13 21077377 21077917 -99206395 - RLTR25B LTR ERVK -174 854 255 1 745 312 169 0 48 chr13 21077913 21077975 -99206337 - RLTR25B LTR ERVK -968 60 2 1 745 2084 115 42 58 chr13 21077975 21078317 -99205995 - MT2B LTR ERVL -264 337 2 1 745 355 229 63 18 chr13 21078226 21078337 -99205975 - ORR1A3-int LTR MaLR -1258 705 590 1 745 444 185 0 0 chr13 21078337 21078445 -99205867 + (CA)n Simple_repeat Simple_repeat 2 109 0 1 745 23 0 0 0 chr13 21078486 21078509 -99205803 + AT_rich Low_complexity Low_complexity 1 23 0 1 745 441 0 0 0 chr13 21078904 21078953 -99205359 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 745 519 17 0 0 chr13 21078953 21079012 -99205300 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 745 260 27 27 0 chr13 21079332 21079369 -99204943 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 745 1055 112 0 0 chr13 21079369 21079512 -99204800 - B1_Mus1 SINE Alu -2 146 4 1 745 277 302 60 26 chr13 21079800 21079961 -99204351 - MIRm SINE MIR -61 215 42 1 745 693 213 165 36 chr13 21080289 21080688 -99203624 + L1MC4 LINE L1 7433 7873 -9 1 745 1423 238 45 50 chr13 21081217 21081598 -99202714 + MTE2b LTR MaLR 1 379 0 1 745 852 329 10 17 chr13 21082900 21083194 -99201118 + B4A SINE B4 1 292 0 1 745 804 209 99 20 chr13 21084146 21084350 -99199962 - B3 SINE B2 0 216 17 1 745 321 364 56 39 chr13 21084403 21084583 -99199729 + Charlie8 DNA MER1_type 61 243 -2185 1 745 272 299 52 0 chr13 21084596 21084693 -99199619 + L2a LINE L2 3323 3424 -2 1 745 340 245 93 19 chr13 21085544 21085652 -99198660 - PB1D10 SINE Alu -1 116 1 1 745 225 0 0 0 chr13 21086824 21086849 -99197463 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 745 409 306 70 37 chr13 21086865 21087008 -99197304 - B1F SINE Alu 0 149 1 1 745 274 369 79 48 chr13 21087008 21087030 -99197282 - ID_B1 SINE B4 0 224 55 1 745 373 357 88 0 chr13 21088451 21088633 -99195679 - MIRb SINE MIR -68 200 3 1 745 206 350 92 0 chr13 21088651 21088771 -99195541 - L2b LINE L2 -1 3374 3244 1 745 246 32 0 0 chr13 21089310 21089341 -99194971 + (GTTTG)n Simple_repeat Simple_repeat 3 33 0 1 745 816 296 54 21 chr13 21089654 21090079 -99194233 - L1M1 LINE L1 -496 5804 5366 1 745 1740 243 109 11 chr13 21090125 21090885 -99193427 - L1_Mur3 LINE L1 -2057 3823 2989 1 745 297 151 0 0 chr13 21091363 21091416 -99192896 + CT-rich Low_complexity Low_complexity 2 54 0 1 745 600 84 0 0 chr13 21091482 21091565 -99192747 + (GGAA)n Simple_repeat Simple_repeat 3 85 0 1 745 234 313 0 15 chr13 21091628 21091696 -99192616 - MLT1I LTR MaLR -337 74 8 1 745 363 263 25 32 chr13 21091978 21092135 -99192177 + (TATG)n Simple_repeat Simple_repeat 3 158 0 1 745 673 269 24 30 chr13 21092693 21092858 -99191454 + B4A SINE B4 111 274 -18 1 745 521 68 14 0 chr13 21092858 21092932 -99191380 + (GA)n Simple_repeat Simple_repeat 1 75 0 1 745 402 216 18 110 chr13 21093339 21093448 -99190864 + MT2B LTR ERVL 166 264 -337 1 745 1017 61 0 0 chr13 21093352 21093483 -99190829 + B1_Mm SINE Alu 17 147 0 1 745 213 39 0 0 chr13 21093483 21093509 -99190803 + (A)n Simple_repeat Simple_repeat 1 26 0 1 745 267 372 43 75 chr13 21093618 21093804 -99190508 - ORR1E LTR MaLR -179 180 1 1 745 216 0 0 0 chr13 21093938 21093962 -99190350 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 1 745 630 155 0 0 chr13 21094601 21094717 -99189595 + (CA)n Simple_repeat Simple_repeat 2 117 0 1 745 455 274 9 36 chr13 21095320 21095430 -99188882 - PB1D7 SINE Alu -5 115 9 1 745 32 81 0 0 chr13 21095490 21095564 -99188748 + AT_rich Low_complexity Low_complexity 1 74 0 1 745 334 247 60 36 chr13 21095603 21095687 -99188625 + 4.5SRNA scRNA scRNA 1 86 -8 1 745 776 236 92 25 chr13 21095699 21095895 -99188417 + B4A SINE B4 8 216 -76 1 745 880 301 21 24 chr13 21095904 21096193 -99188119 + B4 SINE B4 3 290 -2 1 745 1478 179 15 70 chr13 21098401 21098621 -99185691 + RLTR11A LTR ERVK 214 433 -95 1 745 1167 62 7 0 chr13 21098621 21098767 -99185545 + B1_Mus1 SINE Alu 2 148 0 1 745 207 0 0 0 chr13 21098770 21098793 -99185519 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 745 1478 179 15 70 chr13 21098793 21098899 -99185413 + RLTR11A LTR ERVK 434 526 -2 1 745 271 42 0 59 chr13 21099788 21099839 -99184473 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 1 745 665 245 158 0 chr13 21100365 21100549 -99183763 + B4A SINE B4 2 214 -78 1 745 378 0 0 0 chr13 21100562 21100604 -99183708 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 93 494 280 140 22 chr13 21102305 21102626 -99181686 - MLT1A0 LTR MaLR -2 363 5 1 746 323 283 31 55 chr13 21103616 21103743 -99180569 + ID_B1 SINE B4 67 190 -34 1 746 877 181 137 0 chr13 21104713 21104895 -99179417 + B3 SINE B2 10 216 0 1 746 246 125 0 0 chr13 21105431 21105479 -99178833 + Lx8 LINE L1 7423 7470 -3 1 746 22 35 0 0 chr13 21105484 21105513 -99178799 + AT_rich Low_complexity Low_complexity 1 29 0 1 746 251 279 11 44 chr13 21105728 21105818 -99178494 + Charlie15a DNA MER1_type 102 188 -36 1 746 957 131 0 0 chr13 21106298 21106451 -99177861 + (TTC)n Simple_repeat Simple_repeat 2 154 0 1 746 288 70 0 0 chr13 21107958 21108001 -99176311 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 746 995 200 67 0 chr13 21109173 21109383 -99174929 + URR1B DNA MER1_type 1 224 -1 1 746 373 312 47 107 chr13 21109785 21110177 -99174135 + MTEb LTR MaLR 1 373 -6 1 746 597 61 0 0 chr13 21110683 21110765 -99173547 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 746 408 40 0 0 chr13 21111064 21111114 -99173198 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 1 746 23 0 0 0 chr13 21111406 21111429 -99172883 + AT_rich Low_complexity Low_complexity 1 23 0 1 746 606 300 107 8 chr13 21111727 21112122 -99172190 + L1MA4 LINE L1 5542 5967 -189 1 746 531 305 146 31 chr13 21114445 21114771 -99169541 + ORR1E LTR MaLR 1 377 -2 1 746 633 267 30 5 chr13 21114822 21115025 -99169287 - ID_B1 SINE B4 -14 210 3 1 746 342 141 0 0 chr13 21115427 21115491 -99168821 - L1Md_F2 LINE L1 -4 6578 6515 1 746 406 207 45 22 chr13 21115544 21115633 -99168679 + MER2B DNA MER2_type 180 270 -66 1 746 310 321 12 0 chr13 21115670 21115751 -99168561 - MER2B DNA MER2_type -1 335 254 1 746 346 325 134 12 chr13 21116150 21116315 -99167997 - Arthur1 DNA Tip100 -3263 684 499 1 746 1038 203 40 102 chr13 21116315 21116589 -99167723 + MTD LTR MaLR 1 257 -162 1 746 286 309 71 24 chr13 21116624 21116750 -99167562 - Arthur1 DNA Tip100 -3791 156 25 1 746 766 264 61 5 chr13 21117237 21117435 -99166877 + B3 SINE B2 1 209 -7 1 746 392 194 496 0 chr13 21117612 21117751 -99166561 + B3 SINE B2 3 210 -6 1 746 248 320 91 48 chr13 21118112 21118299 -99166013 - ORR1E LTR MaLR -164 195 1 1 746 1866 129 58 78 chr13 21118417 21118610 -99165702 - ORR1B1 LTR MaLR 0 394 184 1 746 2731 152 189 2 chr13 21118610 21119123 -99165189 + RMER19C LTR ERVK 1 609 -2 1 746 1866 129 58 78 chr13 21119123 21119290 -99165022 - ORR1B1 LTR MaLR -211 183 41 1 746 489 143 41 0 chr13 21119406 21119504 -99164808 - MTD LTR MaLR -7 372 271 1 746 568 234 23 8 chr13 21119492 21119621 -99164691 - MTD LTR MaLR -279 140 10 1 746 884 290 28 5 chr13 21119664 21119882 -99164430 - MTE2b LTR MaLR -156 223 1 1 746 1189 272 116 41 chr13 21121177 21121430 -99162882 + MER82 DNA MER2_type 121 373 -280 1 746 303 93 0 0 chr13 21121430 21121473 -99162839 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 746 1189 272 116 41 chr13 21121473 21121710 -99162602 + MER82 DNA MER2_type 374 647 -6 1 746 316 336 0 0 chr13 21121716 21121820 -99162492 + Charlie4a DNA MER1_type 223 326 -182 1 746 224 212 28 70 chr13 21121820 21121891 -99162421 + PB1D10 SINE Alu 44 111 -6 1 746 785 20 10 0 chr13 21123185 21123284 -99161028 + (CA)n Simple_repeat Simple_repeat 2 101 0 1 746 1460 62 5 0 chr13 21123311 21123506 -99160806 - L1Md_F2 LINE L1 -2 6580 6385 1 746 835 269 0 28 chr13 21123506 21123724 -99160588 - B3 SINE B2 -4 212 1 1 746 677 235 71 16 chr13 21123733 21123915 -99160397 - B3A SINE B2 -6 192 1 1 746 288 0 0 0 chr13 21124215 21124247 -99160065 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 746 202 259 271 0 chr13 21125494 21125579 -99158733 + MIRc SINE MIR 2 109 -159 2 746 405 0 0 0 chr13 21125941 21125986 -99158326 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 746 503 308 33 40 chr13 21125987 21126139 -99158173 - B3A SINE B2 -47 151 1 2 746 240 276 79 87 chr13 21126139 21126211 -99158101 + MER46C DNA MER2_type 267 337 -1 2 746 517 301 15 22 chr13 21126442 21126578 -99157734 - RSINE1 SINE B4 -28 137 3 2 746 422 305 29 0 chr13 21127724 21127829 -99156483 - B3 SINE B2 -107 109 2 2 746 508 342 89 29 chr13 21128002 21128318 -99155994 - MER89 LTR ERV1 -53 506 172 2 746 456 111 0 0 chr13 21128683 21128755 -99155557 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 746 1802 233 93 7 chr13 21128783 21129203 -99155109 - MT2A LTR ERVL -77 456 1 2 746 370 297 49 49 chr13 21130233 21130396 -99153916 - Tigger13a DNA MER2_type -494 277 115 2 746 21 0 0 0 chr13 21130487 21130508 -99153804 + AT_rich Low_complexity Low_complexity 1 21 0 2 746 1576 204 55 38 chr13 21130571 21131045 -99153267 + Lx9 LINE L1 5447 5969 -1675 2 746 381 136 0 0 chr13 21131278 21131344 -99152968 + (TCTCCC)n Simple_repeat Simple_repeat 3 68 0 2 746 915 295 65 0 chr13 21131359 21131637 -99152675 + Lx9 LINE L1 6357 6652 -992 2 746 719 309 33 131 chr13 21131637 21131742 -99152570 + MT2B LTR ERVL 1 102 -431 2 746 2576 32 3 0 chr13 21131742 21132055 -99152257 + L1Md_F3 LINE L1 6256 6569 -15 2 746 773 281 29 97 chr13 21132055 21132429 -99151883 + MT2B LTR ERVL 103 511 -90 2 746 192 125 0 0 chr13 21132474 21132506 -99151806 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2 746 235 115 37 37 chr13 21132584 21132638 -99151674 + MT2B LTR ERVL 480 533 0 2 746 1467 244 30 50 chr13 21132638 21133100 -99151212 + Lx9 LINE L1 6649 7101 -543 2 746 273 277 33 20 chr13 21133124 21133275 -99151037 + (CATA)n Simple_repeat Simple_repeat 3 155 0 2 746 252 179 44 72 chr13 21133205 21133386 -99150926 + (CATAT)n Simple_repeat Simple_repeat 5 180 0 2 746 586 225 0 0 chr13 21133404 21133524 -99150788 + Lx9 LINE L1 7076 7195 -449 2 746 226 329 0 0 chr13 21133571 21133641 -99150671 + MTD LTR MaLR 32 101 -318 2 746 500 385 35 0 chr13 21133708 21133789 -99150523 + B4A SINE B4 2 88 -204 2 746 305 350 8 61 chr13 21133789 21133882 -99150430 + B1F2 SINE Alu 3 92 -57 2 746 387 60 0 0 chr13 21133882 21133932 -99150380 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 746 305 350 8 61 chr13 21133932 21133969 -99150343 + B1F2 SINE Alu 93 126 -23 2 746 463 229 0 68 chr13 21134019 21134136 -99150176 + B1_Mur1 SINE Alu 5 113 -36 2 746 390 286 0 0 chr13 21134136 21134255 -99150057 + CT-rich Low_complexity Low_complexity 2 120 0 2 746 405 102 0 0 chr13 21134255 21134314 -99149998 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 746 1260 157 15 10 chr13 21135336 21135542 -99148770 + URR1B DNA MER1_type 19 225 0 2 746 504 297 43 61 chr13 21135542 21135650 -99148662 - CYRA11_Mm Unknown Y-chromosome -444 173 71 2 746 216 170 0 0 chr13 21135698 21135751 -99148561 + T-rich Low_complexity Low_complexity 1 53 0 2 746 2287 191 16 9 chr13 21135762 21136201 -99148111 - RMER10A LTR ERVL 0 442 1 2 746 317 260 25 38 chr13 21136530 21136552 -99147760 - RSINE1 SINE B4 -72 93 73 2 746 348 127 0 0 chr13 21136552 21136607 -99147705 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 746 317 260 25 38 chr13 21136607 21136664 -99147648 - RSINE1 SINE B4 -93 72 15 2 746 206 184 20 20 chr13 21137156 21137206 -99147106 + T-rich Low_complexity Low_complexity 1 50 0 2 746 257 245 0 0 chr13 21137231 21137280 -99147032 - PB1D7 SINE Alu -63 57 9 2 746 241 242 64 11 chr13 21137754 21137842 -99146470 - Lx9 LINE L1 -1548 5925 5834 2 746 289 298 19 9 chr13 21137847 21137952 -99146360 - L1M1 LINE L1 -516 5787 5682 2 746 241 337 20 10 chr13 21137981 21138083 -99146229 + RMER1C Other Other 50 152 -1190 2 746 269 349 47 0 chr13 21138245 21138351 -99145961 + RMER1C Other Other 30 140 -1202 2 746 2672 231 123 33 chr13 21138391 21139152 -99145160 + RMER1C Other Other 453 1282 -60 2 746 766 223 201 0 chr13 21139171 21139440 -99144872 + Lx9 LINE L1 7316 7638 -6 2 746 508 239 9 18 chr13 21139445 21139556 -99144756 - MTC LTR MaLR -299 122 13 2 746 269 270 0 0 chr13 21139600 21139663 -99144649 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2 746 588 295 50 52 chr13 21139690 21140137 -99144175 - L1_Mur3 LINE L1 -4022 1825 1359 2 746 215 164 16 0 chr13 21140449 21140510 -99143802 + T-rich Low_complexity Low_complexity 4 65 0 2 746 2777 228 34 21 chr13 21140751 21141402 -99142910 + Lx6 LINE L1 6798 7456 -4 2 746 214 258 0 31 chr13 21142247 21142311 -99142001 + CT-rich Low_complexity Low_complexity 4 65 0 2 746 208 0 62 0 chr13 21142511 21142543 -99141769 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 746 15700 112 11 8 chr13 21142653 21146353 -99137959 + L1VL4 LINE L1 554 4260 -1626 2 746 31301 72 1 1 chr13 21146388 21151765 -99132547 + L1Md_F2 LINE L1 209 5586 -297 2 746 8219 47 1 0 chr13 21151765 21152757 -99131555 + L1Md_F2 LINE L1 5587 6579 -3 2 746 800 129 20 158 chr13 21152757 21152959 -99131353 + L1VL4 LINE L1 4243 4416 -1461 2 746 297 93 0 0 chr13 21152961 21153004 -99131308 - U2 snRNA snRNA -145 43 1 2 746 31 26 0 0 chr13 21153142 21153180 -99131132 + AT_rich Low_complexity Low_complexity 1 38 0 2 746 7945 139 20 4 chr13 21153205 21154580 -99129732 + L1_Mm LINE L1 4427 5823 -60 2 746 2785 124 9 5 chr13 21154580 21155018 -99129294 + Lx LINE L1 6209 6648 -6 2 746 32 0 0 0 chr13 21155116 21155148 -99129164 + AT_rich Low_complexity Low_complexity 1 32 0 2 746 21 0 0 0 chr13 21155256 21155277 -99129035 + AT_rich Low_complexity Low_complexity 1 21 0 2 746 641 345 104 25 chr13 21155653 21156010 -99128302 - MLT1A1 LTR MaLR -5 403 19 2 746 342 138 52 0 chr13 21156499 21156557 -99127755 + MurSatRep1 Unknown Unknown 222 282 -1855 2 746 1246 304 30 5 chr13 21156596 21157032 -99127280 + Lx7 LINE L1 6850 7296 -400 2 746 4317 124 7 12 chr13 21157039 21157722 -99126590 + RLTR21 LTR ERVK 104 783 -789 2 746 268 275 110 63 chr13 21157740 21158051 -99126261 - RLTR41 LTR ERV1 -47 472 155 2 746 2562 139 228 86 chr13 21158284 21158451 -99125861 + RLTR21 LTR ERVK 780 947 -625 2 746 198 0 0 0 chr13 21158451 21158473 -99125839 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 2 746 2562 139 228 86 chr13 21158473 21158672 -99125640 + RLTR21 LTR ERVK 948 1263 -309 2 746 441 0 0 0 chr13 21158672 21158721 -99125591 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 746 2562 139 228 86 chr13 21158721 21159043 -99125269 + RLTR21 LTR ERVK 1264 1566 -6 2 746 22 35 0 0 chr13 21159086 21159115 -99125197 + AT_rich Low_complexity Low_complexity 1 29 0 2 746 27 73 0 0 chr13 21159147 21159202 -99125110 + AT_rich Low_complexity Low_complexity 1 55 0 2 746 306 157 133 11 chr13 21159211 21159301 -99125011 - Lx9 LINE L1 -27 7617 7517 2 746 3843 108 36 58 chr13 21159326 21159964 -99124348 + Lx LINE L1 6031 6654 0 2 746 4553 209 28 8 chr13 21159965 21161069 -99123243 + Lx2B LINE L1 5827 6846 -154 2 746 2517 240 64 23 chr13 21161141 21161999 -99122313 - L1_Rod LINE L1 -2755 3092 2200 2 746 399 276 94 0 chr13 21162067 21162194 -99122118 - B1F2 SINE Alu -5 144 6 2 746 22 0 0 0 chr13 21162630 21162652 -99121660 + AT_rich Low_complexity Low_complexity 1 22 0 2 746 756 224 7 0 chr13 21163678 21163825 -99120487 - B1_Mur2 SINE Alu -1 148 1 2 746 412 325 48 0 chr13 21166000 21166126 -99118186 - B1F SINE Alu -9 140 9 2 746 230 260 0 25 chr13 21168287 21168366 -99115946 + (CAGAGA)n Simple_repeat Simple_repeat 5 81 0 2 746 272 231 0 0 chr13 21168382 21168434 -99115878 - ID_B1 SINE B4 -67 157 106 2 746 210 244 0 0 chr13 21168525 21168570 -99115742 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 746 486 132 164 0 chr13 21168570 21168783 -99115529 + Lx9 LINE L1 7376 7643 -1 2 746 255 345 18 35 chr13 21169779 21169893 -99114419 + L1_Rod LINE L1 123 234 -6938 2 746 3304 210 47 22 chr13 21169895 21171336 -99112976 + L1_Rod LINE L1 443 1929 -3918 2 746 494 245 53 26 chr13 21171360 21171549 -99112763 + L1_Rod LINE L1 2953 3146 -2701 2 746 337 226 12 23 chr13 21171551 21171637 -99112675 + L1_Mur3 LINE L1 2955 3039 -2841 2 746 1034 165 109 0 chr13 21171678 21171926 -99112386 + L1_Rod LINE L1 1939 2213 -3634 2 746 535 209 70 0 chr13 21171933 21172048 -99112264 + B1_Mus2 SINE Alu 15 137 -10 2 746 186 43 0 0 chr13 21172048 21172071 -99112241 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 746 201 261 0 0 chr13 21172084 21172130 -99112182 + A-rich Low_complexity Low_complexity 4 49 0 2 746 616 237 7 15 chr13 21172170 21172307 -99112005 + B1_Mur2 SINE Alu 5 140 -9 2 746 360 213 82 0 chr13 21172381 21172503 -99111809 + Lx9 LINE L1 7505 7636 -8 2 746 794 255 19 28 chr13 21172472 21172822 -99111490 + Lx6 LINE L1 3409 3746 -2400 2 746 5639 153 214 19 chr13 21172801 21173333 -99110979 + Lx6 LINE L1 4078 4865 -1015 2 746 1170 117 0 0 chr13 21173333 21173512 -99110800 + (TTC)n Simple_repeat Simple_repeat 1 179 0 2 746 393 22 0 0 chr13 21173513 21173559 -99110753 + (CCCCCT)n Simple_repeat Simple_repeat 6 51 0 2 746 5639 153 214 19 chr13 21173559 21174439 -99109873 + Lx6 LINE L1 4866 5768 -112 2 746 2502 140 78 33 chr13 21174439 21174889 -99109423 - RMER16 LTR ERVK 0 533 64 2 746 1439 202 176 8 chr13 21174930 21175370 -99108942 + Lx6 LINE L1 5784 6306 -1154 2 746 2875 83 23 0 chr13 21175370 21175765 -99108547 + MT2B2 LTR ERVL 1 404 -180 2 746 294 29 0 0 chr13 21175783 21175818 -99108494 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2 746 938 26 9 0 chr13 21175842 21175958 -99108354 - B1_Mm SINE Alu 0 147 31 2 746 1088 131 4 2 chr13 21175930 21176115 -99108197 + MT2B2 LTR ERVL 355 558 -43 2 746 2272 244 35 2 chr13 21176115 21176652 -99107660 + Lx6 LINE L1 6889 7443 -17 2 746 25 0 0 0 chr13 21176698 21176723 -99107589 + AT_rich Low_complexity Low_complexity 1 25 0 2 746 304 114 0 0 chr13 21176769 21176813 -99107499 - Lx9 LINE L1 -416 7228 7185 2 746 308 200 204 41 chr13 21176803 21176975 -99107337 - L1M2 LINE L1 -762 5550 5351 2 746 298 283 56 26 chr13 21176994 21177226 -99107086 - L1M2 LINE L1 -916 5227 4989 2 746 593 290 75 36 chr13 21177254 21177374 -99106938 - L1M2 LINE L1 -1343 4800 4683 2 746 2807 35 70 3 chr13 21177374 21177716 -99106596 + RLTR10B2 LTR ERVK 1 365 0 2 746 593 290 75 36 chr13 21177716 21178064 -99106248 - L1M2 LINE L1 -1461 4682 4314 2 746 392 189 24 16 chr13 21178079 21178203 -99106109 - Lx9 LINE L1 -8 7636 7512 2 746 347 105 0 0 chr13 21178206 21178263 -99106049 + Lx9 LINE L1 7423 7479 -165 2 746 421 257 91 24 chr13 21178312 21178599 -99105713 + L1M2 LINE L1 5007 5312 -831 2 746 498 289 0 40 chr13 21178801 21178949 -99105363 - B1F SINE Alu -6 143 2 2 746 833 200 0 0 chr13 21179149 21179304 -99105008 - Lx9 LINE L1 -374 7270 7116 2 746 198 0 0 0 chr13 21179308 21179330 -99104982 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 746 575 165 461 9 chr13 21179332 21179553 -99104759 + Lx9 LINE L1 7324 7644 0 3 746 2401 82 26 12 chr13 21179625 21179971 -99104341 + L1Md_F2 LINE L1 6231 6581 -1 3 746 577 258 161 0 chr13 21181000 21181279 -99103033 - L1MA8 LINE L1 -27 6264 5941 3 746 762 194 97 6 chr13 21182443 21182619 -99101693 - Lx6 LINE L1 -4 7456 7265 3 746 631 184 107 20 chr13 21182619 21182765 -99101547 - RMER4A LTR ERVK 0 466 308 3 746 2332 167 40 9 chr13 21182765 21183189 -99101123 - RMER4A LTR ERVK 0 466 30 3 746 1229 120 43 0 chr13 21183190 21183399 -99100913 - Lx2 LINE L1 -10 6987 6770 3 746 9293 166 121 7 chr13 21183399 21186771 -99097541 - Lx2 LINE L1 -357 6640 2377 3 746 3241 43 2 10 chr13 21186771 21187170 -99097142 - MTA_Mm LTR MaLR 0 396 1 3 746 7815 203 318 8 chr13 21187170 21187305 -99097007 - Lx2 LINE L1 -3504 2376 2242 3 746 5271 99 4 4 chr13 21187323 21188111 -99096201 - L1VL4 LINE L1 -5313 989 202 3 746 516 207 36 0 chr13 21188157 21188268 -99096044 - Lx6 LINE L1 -186 7274 7160 3 746 1449 164 40 7 chr13 21188277 21188554 -99095758 - Lx6 LINE L1 -1584 5876 5591 3 746 3576 165 52 9 chr13 21188559 21189353 -99094959 - L1_Mur3 LINE L1 -2191 3689 2862 3 746 1346 236 55 22 chr13 21189353 21189717 -99094595 + RLTR28B LTR ERVL 1 376 -105 3 746 252 0 0 0 chr13 21189746 21189774 -99094538 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 746 207 0 0 0 chr13 21189774 21189796 -99094516 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 746 836 191 43 48 chr13 21189796 21190027 -99094285 - L1_Mur3 LINE L1 -3026 2854 2625 3 746 626 147 96 6 chr13 21190038 21190216 -99094096 - L1_Rod LINE L1 -4071 1776 1583 3 746 1302 93 41 5 chr13 21190206 21190400 -99093912 - Lx5 LINE L1 -1257 5793 5593 3 746 969 294 110 48 chr13 21190412 21190812 -99093500 + MT2A LTR ERVL 103 527 -6 3 746 1092 251 70 45 chr13 21190864 21191223 -99093089 - ORR1D2 LTR MaLR 0 370 3 3 746 1356 205 74 26 chr13 21191230 21191690 -99092622 + Lx7 LINE L1 3122 3603 -2277 3 746 949 206 109 4 chr13 21191686 21191925 -99092387 - Lx6 LINE L1 0 7460 7197 3 746 254 235 0 0 chr13 21192350 21192401 -99091911 - MMVL30-int LTR ERV1 -2354 1344 1294 3 746 280 294 106 50 chr13 21192663 21193039 -99091273 + MMERGLN-int LTR ERV1 1438 1834 -5772 3 746 1025 328 64 39 chr13 21193120 21194581 -99089731 + MMERGLN-int LTR ERV1 2318 4459 -3147 3 746 3769 220 116 67 chr13 21194889 21196479 -99087833 + Lx7 LINE L1 3846 5513 -367 3 746 259 264 8 83 chr13 21196486 21196606 -99087706 + Lx7 LINE L1 6162 6272 -1424 3 746 802 92 28 0 chr13 21196608 21196749 -99087563 + RMER17B LTR ERVK 312 456 -502 3 746 282 87 0 0 chr13 21196749 21196795 -99087517 + (A)n Simple_repeat Simple_repeat 1 46 0 3 746 1281 328 21 39 chr13 21196798 21197356 -99086956 + Lx7 LINE L1 6265 6812 -884 3 746 1892 133 33 52 chr13 21197579 21197699 -99086613 + RLTR15 LTR ERVK 1 124 -235 3 746 1349 86 11 0 chr13 21197699 21197885 -99086427 + B2_Mm1t SINE B2 1 188 -5 3 746 1892 133 33 52 chr13 21197885 21198130 -99086182 + RLTR15 LTR ERVK 125 359 0 3 746 752 225 37 21 chr13 21198141 21198332 -99085980 - B3A SINE B2 -3 195 2 3 746 347 366 41 38 chr13 21198462 21198752 -99085560 - L2 LINE L2 -870 2549 2259 3 746 555 208 89 37 chr13 21198863 21198998 -99085314 - B1_Mur2 SINE Alu -7 142 1 3 746 704 203 40 34 chr13 21199043 21199135 -99085177 + B1_Mur3 SINE Alu 1 91 -58 3 746 3482 23 101 16 chr13 21199135 21199573 -99084739 + IAPLTR2_Mm LTR ERVK 1 475 0 3 746 704 203 40 34 chr13 21199573 21199628 -99084684 + B1_Mur3 SINE Alu 92 149 0 3 746 2878 225 58 81 chr13 21199786 21200666 -99083646 + RMER13A LTR ERVK 1 860 0 3 746 3040 211 39 182 chr13 21201021 21201171 -99083141 - RMER1B Other Other -5 1061 921 3 746 1309 93 16 11 chr13 21201171 21201356 -99082956 + B2_Mm2 SINE B2 1 186 -9 3 746 3040 211 39 182 chr13 21201356 21202440 -99081872 - RMER1B Other Other -146 920 4 3 746 21 36 0 0 chr13 21202661 21202689 -99081623 + AT_rich Low_complexity Low_complexity 1 28 0 3 746 4162 60 0 35 chr13 21203653 21204201 -99080111 - L1_Mus2 LINE L1 0 6566 6038 3 746 3694 95 35 11 chr13 21205103 21205654 -99078658 - L1_Mus4 LINE L1 -2 6634 6071 3 746 1070 90 0 14 chr13 21206509 21206656 -99077656 + B1_Mm SINE Alu 3 147 0 3 746 374 167 0 0 chr13 21206770 21206842 -99077470 - Lx6 LINE L1 -12 7448 7377 3 746 712 269 24 153 chr13 21208957 21209212 -99075100 - ID_B1 SINE B4 -1 223 2 3 746 1099 216 5 0 chr13 21209447 21209655 -99074657 + B3 SINE B2 2 210 -6 3 746 21 0 0 0 chr13 21209921 21209942 -99074370 + AT_rich Low_complexity Low_complexity 1 21 0 3 746 1321 67 0 122 chr13 21210816 21211038 -99073274 + B2_Mm2 SINE B2 1 195 0 3 746 3757 236 56 15 chr13 21211043 21212099 -99072213 + L1_Mur3 LINE L1 67 1165 -6563 3 746 7205 70 16 0 chr13 21212099 21213755 -99070557 + L1_Mus1 LINE L1 4890 6566 -1 3 746 520 125 107 8 chr13 21213772 21213893 -99070419 + L1_Mur3 LINE L1 1446 1578 -4302 3 746 309 255 122 9 chr13 21213963 21214070 -99070242 + RMER4B LTR ERVK 458 576 -9 3 746 350 292 36 78 chr13 21214093 21214260 -99070052 + Lx5 LINE L1 6872 7031 -19 3 746 2572 144 33 8 chr13 21214302 21214791 -99069521 + L1_Mur3 LINE L1 3925 4425 -1455 3 746 291 368 36 71 chr13 21214791 21214826 -99069486 + B4A SINE B4 58 179 -113 3 746 750 236 21 0 chr13 21214826 21214970 -99069342 + B1_Mus1 SINE Alu 2 148 0 3 746 291 368 36 71 chr13 21214970 21214987 -99069325 + B4A SINE B4 180 246 -46 3 746 689 184 36 168 chr13 21215012 21215094 -99069218 + L1_Mur3 LINE L1 4452 4518 -1362 3 746 6297 65 2 2 chr13 21215094 21215895 -99068417 + L1_Mus3 LINE L1 5824 6624 -14 3 746 689 184 36 168 chr13 21215895 21216086 -99068226 + L1_Mur3 LINE L1 4519 4689 -1191 3 746 302 105 0 66 chr13 21216123 21216184 -99068128 + (TTTG)n Simple_repeat Simple_repeat 3 59 0 3 746 388 56 89 11 chr13 21216194 21216284 -99068028 + (GTTTG)n Simple_repeat Simple_repeat 3 99 0 3 746 717 12 0 0 chr13 21216284 21216366 -99067946 + (CTCTG)n Simple_repeat Simple_repeat 1 82 0 3 746 1145 64 0 7 chr13 21216368 21216510 -99067802 - B1_Mm SINE Alu -5 142 2 3 746 327 25 0 0 chr13 21216510 21216550 -99067762 + (TTG)n Simple_repeat Simple_repeat 2 41 0 3 746 1027 247 56 17 chr13 21216566 21216860 -99067452 - L1M3 LINE L1 -1479 4661 4350 3 746 707 11 0 22 chr13 21216860 21216949 -99067363 + (TCTCCC)n Simple_repeat Simple_repeat 5 91 0 3 746 1027 247 56 17 chr13 21216949 21217066 -99067246 - L1M3 LINE L1 -1791 4349 4234 3 746 8275 126 21 24 chr13 21217157 21218526 -99065786 + Lx3B LINE L1 5606 6970 -3 3 746 24 0 0 0 chr13 21218534 21218558 -99065754 + AT_rich Low_complexity Low_complexity 1 24 0 3 746 272 109 22 0 chr13 21218558 21218604 -99065708 + L1_Mur3 LINE L1 5362 5408 -472 3 746 449 271 35 68 chr13 21218606 21218765 -99065547 - RMER19C LTR ERVK -379 232 14 3 746 1619 151 180 19 chr13 21218765 21219127 -99065185 + L1_Mur3 LINE L1 5449 5868 -12 3 746 2037 212 52 38 chr13 21219131 21219166 -99065146 + Lx6 LINE L1 6797 6826 -634 3 746 2159 200 54 107 chr13 21219166 21219811 -99064501 - RMER19C LTR ERVK 0 611 1 3 746 2037 212 52 38 chr13 21219811 21220255 -99064057 + Lx6 LINE L1 6827 7283 -177 3 746 354 267 68 8 chr13 21220334 21220451 -99063861 + Lx7 LINE L1 7190 7313 -383 3 746 223 268 0 20 chr13 21220574 21220673 -99063639 + T-rich Low_complexity Low_complexity 5 101 0 3 746 37 52 0 0 chr13 21220737 21220795 -99063517 + AT_rich Low_complexity Low_complexity 1 58 0 3 746 293 318 104 45 chr13 21220981 21221182 -99063130 - MIR SINE MIR -10 252 40 3 746 398 184 0 0 chr13 21222433 21222509 -99061803 - Lx6 LINE L1 -8 7452 7377 3 746 689 232 90 144 chr13 21226033 21226255 -99058057 - ID_B1 SINE B4 -7 217 8 3 746 966 223 14 10 chr13 21226496 21226704 -99057608 + B3 SINE B2 2 210 -6 3 746 751 213 15 0 chr13 21227029 21227165 -99057147 + B1_Mus1 SINE Alu 3 140 -8 3 746 25 65 0 0 chr13 21227876 21227922 -99056390 + AT_rich Low_complexity Low_complexity 1 46 0 3 746 251 306 51 0 chr13 21228118 21228216 -99056096 + PB1D10 SINE Alu 13 115 -2 3 746 3133 281 87 52 chr13 21228595 21228683 -99055629 - Lx9 LINE L1 -20 7624 7546 3 746 231 114 0 0 chr13 21228683 21228718 -99055594 + (CATA)n Simple_repeat Simple_repeat 1 35 0 3 746 3133 281 87 52 chr13 21228718 21229827 -99054485 - Lx9 LINE L1 -99 7545 6342 3 746 8301 19 3 3 chr13 21229827 21230756 -99053556 + RLTR13B3 LTR ERVK 1 929 0 3 746 3133 281 87 52 chr13 21230756 21231014 -99053298 - Lx9 LINE L1 -1303 6341 6117 3 746 280 83 0 0 chr13 21231019 21231055 -99053257 - Lx9 LINE L1 -1017 6627 6592 3 746 1094 212 176 15 chr13 21231058 21231331 -99052981 - Lx9 LINE L1 -83 5764 5448 3 746 772 111 24 0 chr13 21231347 21231473 -99052839 - B1_Mur4 SINE Alu -13 137 9 3 746 575 178 0 0 chr13 21231488 21231578 -99052734 - Lx9 LINE L1 -391 5456 5367 3 746 561 243 14 22 chr13 21231589 21231728 -99052584 - B1_Mur2 SINE Alu -1 148 11 3 746 1063 219 91 74 chr13 21231729 21232148 -99052164 - Lx9 LINE L1 -497 5350 4925 3 746 973 151 4 8 chr13 21232176 21232429 -99051883 + CT-rich Low_complexity Low_complexity 1 251 0 3 746 269 204 176 0 chr13 21232436 21232544 -99051768 - Lx9 LINE L1 -1 7643 7517 3 746 198 0 0 0 chr13 21232547 21232569 -99051743 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 746 299 340 0 0 chr13 21232572 21232669 -99051643 - Lx9 LINE L1 -297 7347 7251 3 747 488 267 123 0 chr13 21233686 21233832 -99050480 - MTEa LTR MaLR -5 374 211 3 747 232 152 44 29 chr13 21235235 21235303 -99049009 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 747 337 351 39 51 chr13 21238489 21238744 -99045568 - L1ME3B LINE L1 -319 5921 5670 3 747 713 127 155 88 chr13 21239062 21239243 -99045069 + B2_Mm2 SINE B2 1 193 -2 3 747 32 43 0 0 chr13 21239292 21239338 -99044974 + AT_rich Low_complexity Low_complexity 1 46 0 3 747 345 24 0 0 chr13 21239435 21239477 -99044835 + (TTG)n Simple_repeat Simple_repeat 2 43 0 3 747 666 37 0 0 chr13 21240248 21240329 -99043983 + (GA)n Simple_repeat Simple_repeat 1 81 0 3 747 387 0 0 0 chr13 21240473 21240516 -99043796 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 747 22 0 0 0 chr13 21241421 21241443 -99042869 + AT_rich Low_complexity Low_complexity 1 22 0 3 747 276 30 0 0 chr13 21241594 21241627 -99042685 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 747 378 0 0 0 chr13 21241633 21241675 -99042637 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 747 1570 325 58 85 chr13 21241676 21241845 -99042467 - Lx9 LINE L1 -147 7326 7159 3 747 2366 105 16 38 chr13 21241845 21242212 -99042100 - RLTR15 LTR ERVK 0 359 1 3 747 2064 280 69 72 chr13 21242212 21242651 -99041661 - Lx9 LINE L1 -366 7278 6760 3 747 315 0 0 0 chr13 21242651 21242686 -99041626 + (TAG)n Simple_repeat Simple_repeat 2 36 0 3 747 2064 275 70 70 chr13 21242686 21243103 -99041209 - Lx9 LINE L1 -742 6902 6469 3 747 1254 182 8 4 chr13 21243106 21243343 -99040969 + MTD LTR MaLR 2 239 -180 3 747 11912 203 90 40 chr13 21243353 21244199 -99040113 - L1_Mur3 LINE L1 -1176 4704 3865 3 747 1121 102 43 53 chr13 21244199 21244386 -99039926 - B2_Mm2 SINE B2 -8 187 3 4 747 11912 203 90 40 chr13 21244386 21244870 -99039442 - L1_Mur3 LINE L1 -2016 3864 3335 3 747 207 0 0 0 chr13 21244870 21244893 -99039419 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 747 1198 56 0 0 chr13 21244893 21245037 -99039275 - B1_Mm SINE Alu -2 145 2 4 747 11912 203 90 40 chr13 21245037 21246962 -99037350 - L1_Mur3 LINE L1 -2546 3334 1286 3 747 1492 149 38 43 chr13 21246987 21247403 -99036909 + RMER6A LTR ERVK 60 482 -208 4 747 930 127 48 12 chr13 21247405 21247573 -99036739 - RMER6A LTR ERVK -79 677 504 4 747 283 317 114 51 chr13 21247607 21247783 -99036529 + MER77 LTR ERVL 418 604 -3 4 747 549 302 46 37 chr13 21247783 21247880 -99036432 + MER21B LTR ERV1 577 675 -188 4 747 1171 103 5 61 chr13 21247952 21248148 -99036164 + B2_Mm2 SINE B2 2 186 -9 4 747 395 256 0 0 chr13 21248347 21248429 -99035883 + tRNA-Leu-CTA_ tRNA tRNA 1 82 -3 4 747 537 242 48 0 chr13 21248505 21248629 -99035683 + B1_Mur4 SINE Alu 12 141 -9 4 747 1192 48 0 7 chr13 21248650 21248798 -99035514 + B1_Mus1 SINE Alu 1 147 -1 4 747 219 137 39 19 chr13 21248816 21248868 -99035444 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 4 747 26 64 0 0 chr13 21249315 21249362 -99034950 + AT_rich Low_complexity Low_complexity 1 47 0 4 747 1344 213 100 34 chr13 21249464 21249814 -99034498 + ORR1D1 LTR MaLR 2 374 0 4 747 552 297 17 6 chr13 21252261 21252437 -99031875 - B3 SINE B2 0 216 39 4 747 624 0 0 0 chr13 21252653 21252725 -99031587 - tRNA-Glu-GAG_ tRNA tRNA -3 72 1 4 747 422 218 118 0 chr13 21252970 21253080 -99031232 - B1_Mur1 SINE Alu -7 142 20 4 747 661 14 0 0 chr13 21253273 21253346 -99030966 + tRNA-Phe-TTY tRNA tRNA 1 73 -3 4 747 214 163 28 19 chr13 21253985 21254058 -99030254 + A-rich Low_complexity Low_complexity 1 73 0 4 747 230 213 152 51 chr13 21254155 21254234 -99030078 + 4.5SRNA scRNA scRNA 2 88 -6 4 747 632 182 0 9 chr13 21254172 21254283 -99030029 + B1F2 SINE Alu 33 142 -7 4 747 1261 211 58 26 chr13 21254653 21254965 -99029347 + ORR1B2 LTR MaLR 45 366 -1 4 747 526 258 22 43 chr13 21255982 21256094 -99028218 + B1_Mur1 SINE Alu 5 117 -32 4 747 2398 86 3 58 chr13 21256094 21256440 -99027872 - ORR1A2 LTR MaLR 0 327 1 4 747 526 258 22 43 chr13 21256440 21256465 -99027847 + B1_Mur1 SINE Alu 118 139 -10 4 747 219 36 0 0 chr13 21256496 21256524 -99027788 + (CAAAC)n Simple_repeat Simple_repeat 3 30 0 4 747 657 269 153 19 chr13 21256673 21256993 -99027319 - MTEa LTR MaLR -19 360 1 4 747 387 105 0 0 chr13 21257176 21257233 -99027079 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 747 189 0 0 0 chr13 21257279 21257300 -99027012 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 747 1326 234 65 18 chr13 21257300 21257664 -99026648 + MTD LTR MaLR 18 407 -12 4 747 1616 175 213 112 chr13 21257817 21258300 -99026012 + MT2A LTR ERVL 1 532 -1 4 747 256 60 0 57 chr13 21258530 21258583 -99025729 + (CAAAAA)n Simple_repeat Simple_repeat 2 51 0 4 747 556 68 0 0 chr13 21259472 21259545 -99024767 + tRNA-Met_ tRNA tRNA 1 73 -3 4 747 673 26 0 0 chr13 21259940 21260016 -99024296 - tRNA-Lys-AAA tRNA tRNA 0 76 1 4 747 255 320 132 42 chr13 21260506 21260695 -99023617 - LTR50 LTR ERVL -567 228 23 4 747 311 208 0 100 chr13 21261269 21261349 -99022963 - B1_Mur3 SINE Alu -71 78 7 4 747 556 68 0 0 chr13 21261555 21261628 -99022684 - tRNA-Met_ tRNA tRNA -3 73 1 4 747 722 0 0 0 chr13 21261904 21261986 -99022326 + tRNA-Leu-CTY tRNA tRNA 1 82 -3 4 747 204 40 0 0 chr13 21261991 21262016 -99022296 + (T)n Simple_repeat Simple_repeat 1 25 0 4 747 716 24 0 0 chr13 21262074 21262159 -99022153 + tRNA-Leu-CTA_ tRNA tRNA 1 85 0 4 747 233 227 15 29 chr13 21262915 21262983 -99021329 + GA-rich Low_complexity Low_complexity 3 69 0 4 747 360 0 0 0 chr13 21263339 21263379 -99020933 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 747 713 93 9 0 chr13 21263379 21263485 -99020827 + (CATA)n Simple_repeat Simple_repeat 3 110 0 4 747 636 28 0 0 chr13 21264219 21264291 -99020021 + tRNA-Gln-CAG tRNA tRNA 1 72 -3 4 747 547 24 0 217 chr13 21264705 21264811 -99019501 - tRNA-Leu-TTG tRNA tRNA -3 83 1 4 747 222 62 0 0 chr13 21264958 21264990 -99019322 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 747 198 0 0 0 chr13 21266225 21266247 -99018065 + (A)n Simple_repeat Simple_repeat 1 22 0 4 747 433 291 82 0 chr13 21266528 21266662 -99017650 - RSINE1 SINE B4 -17 148 4 4 747 259 200 136 15 chr13 21266664 21266730 -99017582 + HAL1 LINE L1 1632 1705 -802 4 747 423 0 0 0 chr13 21267339 21267386 -99016926 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 747 330 26 0 0 chr13 21267386 21267424 -99016888 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 747 550 268 0 0 chr13 21267585 21267712 -99016600 + B3A SINE B2 4 130 -68 4 747 1390 76 54 0 chr13 21267732 21267916 -99016396 - B2_Mm2 SINE B2 0 195 2 4 747 23 68 0 0 chr13 21267921 21267965 -99016347 + AT_rich Low_complexity Low_complexity 1 44 0 4 747 712 238 85 0 chr13 21268072 21268236 -99016076 + ORR1D2 LTR MaLR 1 178 -192 4 747 791 171 251 6 chr13 21268392 21268563 -99015749 + B3 SINE B2 1 213 -3 4 747 387 0 0 0 chr13 21268634 21268677 -99015635 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 747 252 0 0 0 chr13 21268689 21268717 -99015595 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 747 248 347 0 0 chr13 21268728 21268800 -99015512 - ID4_ SINE ID -8 75 4 4 747 185 154 0 25 chr13 21268810 21268850 -99015462 + CT-rich Low_complexity Low_complexity 4 42 0 4 747 1178 68 7 0 chr13 21269074 21269220 -99015092 - B1_Mus2 SINE Alu 0 147 1 4 747 226 213 0 0 chr13 21269367 21269414 -99014898 - L1_Rod LINE L1 -628 5219 5173 4 747 1304 238 44 19 chr13 21269603 21269968 -99014344 - RMER20A LTR ERVK -138 378 5 4 747 213 224 82 0 chr13 21270125 21270174 -99014138 + ID4 SINE ID 27 79 -4 4 747 252 0 0 0 chr13 21271007 21271035 -99013277 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 747 263 28 0 27 chr13 21271220 21271257 -99013055 + (TGGGGG)n Simple_repeat Simple_repeat 1 36 0 4 747 198 310 0 0 chr13 21271573 21271631 -99012681 - MIRc SINE MIR -118 150 93 4 747 320 319 61 18 chr13 21274519 21274682 -99009630 - MER58A DNA MER1_type 0 224 55 4 747 328 312 9 27 chr13 21274708 21274820 -99009492 - PB1D10 SINE Alu -7 110 1 4 747 300 342 0 0 chr13 21274857 21274930 -99009382 - ID_B1 SINE B4 -42 182 110 4 747 263 28 28 0 chr13 21276328 21276364 -99007948 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 4 747 1155 89 16 16 chr13 21276365 21276548 -99007764 - B2_Mm1a SINE B2 0 193 11 4 747 432 0 0 0 chr13 21276912 21276960 -99007352 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 747 378 266 19 77 chr13 21277606 21277761 -99006551 - RSINE1 SINE B4 0 165 20 4 747 277 374 8 17 chr13 21277886 21278003 -99006309 - PB1D10 SINE Alu 0 117 2 4 747 319 278 77 11 chr13 21278172 21278263 -99006049 - PB1D10 SINE Alu 0 117 21 4 747 1166 62 0 7 chr13 21278281 21278427 -99005885 + B1_Mm SINE Alu 1 145 -2 4 747 271 258 70 30 chr13 21278509 21278609 -99005703 + PB1D9 SINE Alu 3 106 -14 4 747 378 0 0 0 chr13 21278907 21278949 -99005363 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 747 348 287 0 19 chr13 21279109 21279212 -99005100 + B1_Mur1 SINE Alu 45 145 -4 4 747 533 274 59 0 chr13 21279275 21279428 -99004884 + B3A SINE B2 1 162 -36 4 747 539 190 7 116 chr13 21280111 21280266 -99004046 + B1_Mus1 SINE Alu 11 148 0 4 747 420 285 152 7 chr13 21280883 21281028 -99003284 + B3A SINE B2 17 182 -16 4 747 322 267 0 66 chr13 21281367 21281491 -99002821 - PB1D9 SINE Alu -1 119 5 4 747 180 0 0 0 chr13 21281701 21281721 -99002591 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 747 325 304 85 33 chr13 21282068 21282221 -99002091 + RSINE1 SINE B4 2 162 -3 4 747 322 222 34 24 chr13 21282257 21282370 -99001942 - PB1D10 SINE Alu -31 118 5 4 747 573 255 20 7 chr13 21282746 21282892 -99001420 + B1F SINE Alu 2 149 0 4 747 222 256 0 118 chr13 21283248 21283350 -99000962 + PB1D10 SINE Alu 27 116 -1 4 747 307 241 303 9 chr13 21283620 21283729 -99000583 - B1F1 SINE Alu -8 141 1 4 747 382 274 34 8 chr13 21284805 21284923 -98999389 + MTC LTR MaLR 298 418 -3 4 747 1280 229 67 42 chr13 21284923 21285329 -98998983 + MTC-int LTR MaLR 8 483 -775 4 747 719 187 42 37 chr13 21285349 21285538 -98998774 + MTD LTR MaLR 230 419 0 4 747 1276 27 0 0 chr13 21285661 21285808 -98998504 - B1_Mus2 SINE Alu 0 147 1 4 747 188 0 74 0 chr13 21285809 21285836 -98998476 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 747 321 316 53 0 chr13 21286884 21286998 -98997314 - PB1D7 SINE Alu 0 120 1 4 747 412 255 301 12 chr13 21288104 21288267 -98996045 + B3 SINE B2 2 211 -5 4 747 415 179 0 13 chr13 21288323 21288402 -98995910 - PB1D9 SINE Alu -30 90 13 4 747 252 0 0 0 chr13 21289477 21289505 -98994807 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 747 817 247 75 41 chr13 21289505 21289771 -98994541 - MTE2a LTR MaLR -38 341 67 4 747 312 223 202 0 chr13 21289811 21289905 -98994407 + B3 SINE B2 100 212 -4 4 747 242 28 0 0 chr13 21290272 21290308 -98994004 + B1_Mur4 SINE Alu 115 150 0 4 747 770 254 45 66 chr13 21290551 21290795 -98993517 - ORR1D1 LTR MaLR -112 262 24 5 747 1056 116 184 0 chr13 21290867 21291057 -98993255 - URR1B DNA MER1_type 0 225 1 5 747 260 267 13 0 chr13 21291180 21291255 -98993057 + L1ME4a LINE L1 5994 6069 -55 5 747 21 0 0 0 chr13 21291587 21291608 -98992704 + AT_rich Low_complexity Low_complexity 1 21 0 5 747 591 0 0 208 chr13 21292072 21292178 -98992134 + tRNA-Leu-TTG tRNA tRNA 1 84 -2 5 747 186 250 0 0 chr13 21292897 21292953 -98991359 + CT-rich Low_complexity Low_complexity 1 56 0 5 747 475 321 138 12 chr13 21293469 21293900 -98990412 - RMER5 LTR ERV1 -10 524 40 5 747 297 0 0 0 chr13 21293964 21293997 -98990315 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 5 747 668 162 140 0 chr13 21294210 21294346 -98989966 + B3 SINE B2 61 215 -1 5 747 396 283 65 0 chr13 21294377 21294515 -98989797 + B1_Mur1 SINE Alu 3 149 0 5 747 376 304 90 71 chr13 21294535 21294801 -98989511 - RMER5 LTR ERV1 -196 338 68 5 747 249 83 0 0 chr13 21294948 21294984 -98989328 + (A)n Simple_repeat Simple_repeat 1 36 0 5 747 198 0 0 0 chr13 21295628 21295650 -98988662 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 5 747 346 42 0 0 chr13 21295750 21295798 -98988514 + RLTR10B2 LTR ERVK 1 48 -317 5 747 1677 83 11 20 chr13 21295812 21296090 -98988222 + MMERVK10C-int LTR ERVK 72 399 -7182 5 747 40443 60 7 2 chr13 21296088 21301005 -98983307 + MMERVK10C-int LTR ERVK 870 5810 -1771 5 747 7168 68 0 71 chr13 21300991 21301999 -98982313 + MMERVK10C-int LTR ERVK 6646 7581 0 5 747 2805 36 3 11 chr13 21301999 21302367 -98981945 + RLTR10B2 LTR ERVK 1 365 0 5 747 4354 40 77 0 chr13 21302426 21302946 -98981366 + LTRIS2 LTR ERV1 5 564 0 5 747 411 21 0 0 chr13 21302976 21303024 -98981288 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 5 747 254 272 168 53 chr13 21303515 21303705 -98980607 - MLT1A LTR MaLR -98 276 65 5 747 586 250 0 0 chr13 21303840 21303964 -98980348 + B3 SINE B2 93 216 0 5 747 219 293 53 13 chr13 21304000 21304076 -98980236 - L2a LINE L2 -36 3390 3312 5 747 505 194 161 12 chr13 21304460 21304696 -98979616 - MTD LTR MaLR 0 419 117 5 747 311 197 0 116 chr13 21304693 21304762 -98979550 - PB1D9 SINE Alu -58 62 2 5 747 407 276 21 7 chr13 21304785 21304927 -98979385 - L1MC LINE L1 -1589 4557 4414 5 747 266 193 15 3 chr13 21304928 21304995 -98979317 + L1MA6 LINE L1 5340 5440 -851 5 747 443 309 29 64 chr13 21305131 21305304 -98979008 + L1MA6 LINE L1 5432 5598 -702 5 747 315 278 18 44 chr13 21305317 21305430 -98978882 + PB1 SINE Alu 11 120 -7 5 747 535 216 199 10 chr13 21305450 21305646 -98978666 + L1MA6 LINE L1 5620 5852 -448 5 747 270 160 0 0 chr13 21305661 21305711 -98978601 + CT-rich Low_complexity Low_complexity 3 52 0 5 747 687 271 100 21 chr13 21305782 21306121 -98978191 + L1MA6 LINE L1 5865 6230 -70 5 747 965 96 24 12 chr13 21306197 21306366 -98977946 + (GAAA)n Simple_repeat Simple_repeat 3 173 0 5 747 413 234 96 0 chr13 21306378 21306472 -98977840 + B1_Mur2 SINE Alu 13 115 -34 5 747 726 52 284 0 chr13 21306562 21306678 -98977634 - B1_Mur4 SINE Alu 0 150 2 5 747 1297 241 91 13 chr13 21306743 21307126 -98977186 - Lx9 LINE L1 -8 7636 7224 5 747 662 0 0 0 chr13 21307326 21307399 -98976913 - tRNA-Arg-CGG tRNA tRNA -3 73 1 5 747 273 29 0 0 chr13 21307778 21307812 -98976500 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 747 256 337 22 0 chr13 21307861 21307950 -98976362 + ID_B1 SINE B4 123 213 -11 5 747 312 27 0 0 chr13 21308320 21308357 -98975955 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 5 747 210 304 122 37 chr13 21308357 21308439 -98975873 - PB1D7 SINE Alu -13 107 19 5 747 1345 201 55 6 chr13 21308564 21308928 -98975384 + MTC LTR MaLR 6 416 -5 5 747 27 29 0 0 chr13 21309023 21309057 -98975255 + AT_rich Low_complexity Low_complexity 1 34 0 5 747 587 203 22 15 chr13 21309153 21309288 -98975024 - B2_Mm2 SINE B2 -10 185 50 5 747 211 67 0 62 chr13 21309919 21309967 -98974345 + (CAAAAA)n Simple_repeat Simple_repeat 3 47 0 5 747 1127 51 29 0 chr13 21310317 21310455 -98973857 - B1_Mus2 SINE Alu -5 142 1 5 747 741 143 98 0 chr13 21311189 21311322 -98972990 - B1_Mus1 SINE Alu 0 148 3 5 747 804 163 76 108 chr13 21311402 21311639 -98972673 + RMER10A LTR ERVL 1 212 -186 5 747 708 122 26 35 chr13 21311698 21312037 -98972275 + CT-rich Low_complexity Low_complexity 1 335 0 5 747 741 124 16 43 chr13 21312059 21312244 -98972068 + CT-rich Low_complexity Low_complexity 1 180 0 5 747 438 165 0 28 chr13 21312263 21312369 -98971943 + CT-rich Low_complexity Low_complexity 2 104 0 5 747 414 0 0 0 chr13 21312450 21312496 -98971816 + (TTTC)n Simple_repeat Simple_repeat 1 46 0 5 747 1113 97 0 0 chr13 21312497 21312641 -98971671 - B1_Mus1 SINE Alu -3 145 2 5 747 225 261 29 0 chr13 21313401 21313470 -98970842 + MER5A DNA MER1_type 43 113 -76 5 747 419 241 112 0 chr13 21313676 21313792 -98970520 + Ricksha_c DNA MuDR 775 903 -1145 5 747 180 97 0 0 chr13 21313997 21314028 -98970284 + (TTTTTG)n Simple_repeat Simple_repeat 1 31 0 5 747 619 14 0 0 chr13 21314454 21314526 -98969786 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 5 747 25 31 0 0 chr13 21314965 21314997 -98969315 + AT_rich Low_complexity Low_complexity 1 32 0 5 747 308 151 0 0 chr13 21315404 21315457 -98968855 - B1_Mur3 SINE Alu -15 134 82 5 747 423 191 11 43 chr13 21315505 21315598 -98968714 - B1_Mur4 SINE Alu -1 149 60 5 747 243 330 82 10 chr13 21315839 21315937 -98968375 + B3A SINE B2 80 184 -14 5 747 318 182 100 38 chr13 21316034 21316114 -98968198 - B1_Mus2 SINE Alu -1 146 62 5 747 513 248 32 8 chr13 21316144 21316270 -98968042 + B1_Mur1 SINE Alu 21 149 0 5 747 516 183 21 0 chr13 21316407 21316500 -98967812 + PB1D9 SINE Alu 1 95 -25 5 747 895 161 35 0 chr13 21316695 21316838 -98967474 - B1_Mur4 SINE Alu 0 150 3 5 747 782 206 6 0 chr13 21316839 21317004 -98967308 + RLTR25A LTR ERVK 11 176 -852 5 747 1312 150 138 19 chr13 21316982 21317272 -98967040 + RLTR25A LTR ERVK 400 727 -376 5 747 819 117 64 19 chr13 21317272 21317429 -98966883 + B2_Mm1t SINE B2 2 165 -28 5 747 291 139 4 91 chr13 21317499 21317619 -98966693 + B2_Mm2 SINE B2 43 187 -8 5 747 493 134 195 8 chr13 21317609 21317737 -98966575 + RLTR25B LTR ERVK 636 787 -241 5 747 763 156 202 55 chr13 21317933 21318170 -98966142 + RLTR25B LTR ERVK 757 1028 0 5 747 501 257 181 16 chr13 21318220 21318402 -98965910 - ID_B1 SINE B4 -2 222 11 5 747 360 281 11 0 chr13 21318485 21318574 -98965738 - PB1D7 SINE Alu -1 119 30 5 747 28 95 0 0 chr13 21318948 21319032 -98965280 + AT_rich Low_complexity Low_complexity 1 84 0 5 747 1908 186 104 8 chr13 21319057 21319441 -98964871 - MTC LTR MaLR 0 421 1 5 747 2485 165 59 14 chr13 21319649 21320160 -98964152 + RMER5 LTR ERV1 1 534 0 5 747 269 270 32 0 chr13 21320162 21320225 -98964087 - RSINE1 SINE B4 -93 72 8 5 747 3691 44 5 2 chr13 21320353 21320787 -98963525 - RLTR10C LTR ERVK -1 435 1 5 747 605 170 92 43 chr13 21320995 21321136 -98963176 - B1F SINE Alu 0 149 2 5 747 23 0 0 0 chr13 21321319 21321342 -98962970 + AT_rich Low_complexity Low_complexity 1 23 0 5 747 198 0 0 0 chr13 21321509 21321531 -98962781 + (T)n Simple_repeat Simple_repeat 1 22 0 5 747 1123 54 0 13 chr13 21321531 21321680 -98962632 - B1_Mm SINE Alu 0 147 1 5 747 477 293 60 39 chr13 21321683 21321917 -98962395 - B4A SINE B4 -52 240 2 5 747 421 208 0 114 chr13 21321973 21322047 -98962265 + ORR1D1 LTR MaLR 1 72 -302 5 747 2456 191 30 122 chr13 21322047 21322717 -98961595 - RMER19C LTR ERVK -2 609 2 5 747 421 208 0 114 chr13 21322717 21322742 -98961570 + ORR1D1 LTR MaLR 73 87 -287 5 747 1005 97 13 0 chr13 21322742 21322896 -98961416 - RMER6C LTR ERVK -1 689 534 5 747 450 0 0 0 chr13 21322896 21322946 -98961366 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 5 747 603 69 0 0 chr13 21322946 21323060 -98961252 - B2_Mm1a SINE B2 -33 160 2 5 747 240 35 0 0 chr13 21324319 21324348 -98959964 + (TTGG)n Simple_repeat Simple_repeat 4 32 0 5 747 597 207 54 48 chr13 21324367 21324514 -98959798 - B1_Mur2 SINE Alu -1 148 1 5 747 509 278 82 28 chr13 21324548 21324941 -98959371 - L1M4b LINE L1 -3975 3359 2957 5 747 392 236 97 65 chr13 21324994 21325180 -98959132 - L1M4b LINE L1 -4592 2742 2551 5 747 207 100 0 0 chr13 21325444 21325474 -98958838 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 747 335 289 34 11 chr13 21325505 21325618 -98958694 - PB1D7 SINE Alu -6 121 1 5 747 619 14 0 0 chr13 21325913 21325985 -98958327 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 5 747 1193 218 119 33 chr13 21327397 21327873 -98956439 + RMER4B LTR ERVK 17 569 -16 5 747 1258 207 141 25 chr13 21328589 21328795 -98955517 + MTD LTR MaLR 1 210 -209 5 747 823 151 14 28 chr13 21328795 21328938 -98955374 + B1_Mus1 SINE Alu 1 141 -7 5 747 186 71 0 0 chr13 21328938 21328966 -98955346 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 5 747 1258 207 141 25 chr13 21328966 21329120 -98955192 + MTD LTR MaLR 211 403 -16 5 747 1101 237 13 0 chr13 21329215 21329443 -98954869 + MT2A LTR ERVL 18 248 -285 5 747 189 0 0 0 chr13 21329790 21329811 -98954501 + (CACCC)n Simple_repeat Simple_repeat 5 25 0 5 747 3166 72 131 15 chr13 21330523 21330988 -98953324 + MURVY-LTR LTR ERV1 1 519 0 5 747 597 41 0 0 chr13 21332813 21332886 -98951426 + tRNA-Ala-GCA tRNA tRNA 1 73 -2 5 747 320 211 0 0 chr13 21333343 21333419 -98950893 - L1MD LINE L1 -1469 4677 4602 5 747 696 255 6 58 chr13 21333435 21333606 -98950706 + B3 SINE B2 1 162 -54 5 747 608 67 0 11 chr13 21333619 21333710 -98950602 + (CA)n Simple_repeat Simple_repeat 2 91 0 5 747 610 28 0 0 chr13 21334438 21334510 -98949802 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 5 747 375 23 0 0 chr13 21335484 21335528 -98948784 + (TGG)n Simple_repeat Simple_repeat 1 44 0 5 747 245 217 0 0 chr13 21336694 21336740 -98947572 + B1_Mur4 SINE Alu 49 94 -56 5 747 2534 77 3 0 chr13 21337000 21337326 -98946986 + ORR1A2 LTR MaLR 1 327 0 5 747 334 191 0 0 chr13 21337458 21337526 -98946786 - MTC LTR MaLR 0 421 354 5 747 27 49 0 0 chr13 21337615 21337656 -98946656 + AT_rich Low_complexity Low_complexity 1 41 0 5 747 278 299 13 0 chr13 21338140 21338217 -98946095 - ID4_ SINE ID -4 79 2 6 747 454 279 21 35 chr13 21338222 21338367 -98945945 - B1F SINE Alu -6 143 1 6 747 245 318 17 78 chr13 21338738 21338854 -98945458 - ID_B1 SINE B4 -2 222 114 6 747 654 141 0 0 chr13 21339092 21339220 -98945092 + (TC)n Simple_repeat Simple_repeat 1 128 0 6 747 1017 124 0 0 chr13 21339233 21339394 -98944918 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 6 747 287 286 15 95 chr13 21340039 21340204 -98944108 - MLT1E3 LTR MaLR -6 647 501 6 747 28 29 0 0 chr13 21340828 21340863 -98943449 + AT_rich Low_complexity Low_complexity 1 35 0 6 747 648 40 0 0 chr13 21341062 21341136 -98943176 - tRNA-Thr-ACY_ tRNA tRNA -3 74 1 6 747 233 300 0 0 chr13 21341487 21341547 -98942765 + GA-rich Low_complexity Low_complexity 4 63 0 6 747 740 58 198 8 chr13 21342095 21342216 -98942096 - B1_Mus2 SINE Alu -1 146 3 6 747 279 0 0 0 chr13 21342397 21342428 -98941884 + (T)n Simple_repeat Simple_repeat 1 31 0 6 747 223 233 47 62 chr13 21342461 21342525 -98941787 - B1_Mur2 SINE Alu -41 108 46 6 747 320 351 91 15 chr13 21342517 21342780 -98941532 + Cheshire DNA MER1_type 946 1228 -1192 6 747 223 278 0 40 chr13 21343170 21343245 -98941067 + CT-rich Low_complexity Low_complexity 1 72 0 6 747 366 23 0 0 chr13 21344275 21344318 -98939994 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 747 434 286 61 28 chr13 21344457 21344746 -98939566 + L1MC4a LINE L1 6781 7111 -931 6 747 311 256 0 49 chr13 21344804 21344886 -98939426 - ID4_ SINE ID -2 81 4 6 747 443 204 36 27 chr13 21345143 21345254 -98939058 - B1F SINE Alu -1 148 37 6 747 225 232 0 55 chr13 21345383 21345456 -98938856 - L1MD LINE L1 -985 5161 5093 6 747 609 42 0 0 chr13 21346088 21346160 -98938152 + tRNA-Ala-GCG tRNA tRNA 1 72 -3 6 747 1436 196 91 57 chr13 21346825 21347202 -98937110 + Lx5 LINE L1 6677 7049 -1 6 747 211 28 56 0 chr13 21347601 21347637 -98936675 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 747 287 293 91 16 chr13 21347640 21347883 -98936429 + MER20B DNA MER1_type 516 776 -7 6 747 388 244 9 74 chr13 21348200 21348321 -98935991 + PB1D7 SINE Alu 6 119 -1 6 747 228 217 126 46 chr13 21348370 21348457 -98935855 + B4A SINE B4 1 94 -198 6 747 512 300 0 0 chr13 21348676 21348796 -98935516 + RSINE1 SINE B4 3 122 -43 6 747 246 62 0 0 chr13 21348802 21348834 -98935478 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 6 747 279 0 0 0 chr13 21348953 21348984 -98935328 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 6 747 230 222 82 14 chr13 21349445 21349518 -98934794 + L1MB1 LINE L1 6086 6163 -26 6 747 449 286 0 0 chr13 21349572 21349684 -98934628 + L1MA10 LINE L1 6172 6283 -51 6 747 586 237 14 7 chr13 21349736 21349876 -98934436 + B3 SINE B2 6 146 -70 6 747 438 20 0 0 chr13 21349898 21349949 -98934363 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 6 747 283 167 0 77 chr13 21350191 21350295 -98934017 + G-rich Low_complexity Low_complexity 6 101 0 6 747 927 62 0 15 chr13 21350453 21350583 -98933729 - B1_Mus1 SINE Alu -1 147 20 6 747 451 214 72 93 chr13 21350461 21350600 -98933712 - B4 SINE B4 -73 219 84 6 747 306 291 23 11 chr13 21350580 21350667 -98933645 - PB1D7 SINE Alu -24 96 9 6 747 39 0 0 0 chr13 21351530 21351569 -98932743 + AT_rich Low_complexity Low_complexity 1 39 0 6 747 561 97 0 0 chr13 21351636 21351708 -98932604 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 6 747 211 140 0 23 chr13 21352730 21352774 -98931538 + T-rich Low_complexity Low_complexity 6 48 0 6 747 1821 197 19 14 chr13 21353049 21353420 -98930892 + MT2A LTR ERVL 1 373 -160 6 747 361 180 19 136 chr13 21353402 21353505 -98930807 + PB1D9 SINE Alu 30 120 0 6 747 613 143 9 0 chr13 21353843 21353948 -98930364 - B2_Mm1t SINE B2 -87 106 1 6 747 571 142 37 9 chr13 21354114 21354221 -98930091 + ORR1D1 LTR MaLR 263 372 -2 6 747 2099 147 71 0 chr13 21354314 21354668 -98929644 - RLTR30 LTR ERV1 0 379 1 6 747 625 190 194 7 chr13 21354793 21354989 -98929323 + ORR1D1 LTR MaLR 47 286 -84 6 747 587 229 69 19 chr13 21354982 21355142 -98929170 + MTEb LTR MaLR 154 321 -58 6 747 858 317 82 6 chr13 21355133 21355476 -98928836 - MTEb LTR MaLR -10 369 1 6 747 280 330 52 9 chr13 21355477 21355593 -98928719 + L1M4 LINE L1 4911 5031 -1115 6 747 627 40 0 0 chr13 21356448 21356522 -98927790 + tRNA-Thr-ACG_ tRNA tRNA 1 74 -3 6 747 219 351 0 0 chr13 21356936 21356993 -98927319 + polypyrimidine Low_complexity Low_complexity 1 57 0 6 747 461 295 35 13 chr13 21357077 21357303 -98927009 - L1M3 LINE L1 -1769 4377 4147 6 747 533 278 61 70 chr13 21357322 21357611 -98926701 - L1M3 LINE L1 -1902 4244 3950 6 747 225 0 0 0 chr13 21357611 21357636 -98926676 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 747 533 273 58 69 chr13 21357636 21357657 -98926655 - L1M3 LINE L1 -2191 3949 3929 6 747 2067 108 5 81 chr13 21357662 21358045 -98926267 + ORR1B1 LTR MaLR 41 394 0 6 747 367 250 18 18 chr13 21358333 21358443 -98925869 - MER31B LTR ERV1 -84 382 273 6 747 401 202 192 0 chr13 21358505 21358604 -98925708 - MER31B LTR ERV1 -332 134 17 6 747 971 163 11 11 chr13 21359473 21359647 -98924665 - B2_Mm2 SINE B2 -18 177 4 6 747 208 167 24 0 chr13 21359748 21359790 -98924522 + A-rich Low_complexity Low_complexity 1 43 0 6 747 189 0 0 0 chr13 21360069 21360090 -98924222 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 6 747 648 28 0 0 chr13 21360337 21360409 -98923903 - tRNA-Gln-CAA tRNA tRNA -3 72 1 6 747 730 228 29 34 chr13 21360866 21361070 -98923242 + B3 SINE B2 4 206 -10 6 747 1210 262 86 26 chr13 21361308 21361727 -98922585 + RMER5 LTR ERV1 80 523 -11 6 747 1167 54 0 20 chr13 21361875 21362025 -98922287 - B1_Mus2 SINE Alu 0 147 1 6 747 207 88 0 0 chr13 21362027 21362061 -98922251 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 6 747 233 250 99 35 chr13 21362995 21363136 -98921176 - CYRA11_Mm Unknown Y-chromosome -296 321 172 6 747 618 163 32 0 chr13 21363014 21363137 -98921175 + URR1B DNA MER1_type 99 225 0 6 747 358 128 0 87 chr13 21363608 21363711 -98920601 + Lx4A LINE L1 6965 7058 0 6 747 267 157 22 11 chr13 21363716 21363806 -98920506 + (CAAA)n Simple_repeat Simple_repeat 2 92 0 6 747 308 306 35 0 chr13 21363824 21363909 -98920403 + B1F1 SINE Alu 1 88 -61 6 93 1222 210 33 30 chr13 21364487 21364821 -98919491 + MTD-int LTR MaLR 922 1256 -2 6 748 546 179 26 9 chr13 21364828 21364941 -98919371 + MTD LTR MaLR 6 120 -299 6 748 448 254 73 0 chr13 21364965 21365075 -98919237 - B3 SINE B2 -97 119 2 6 748 1308 196 108 0 chr13 21365075 21365359 -98918953 + MTD LTR MaLR 105 419 0 6 748 327 293 0 0 chr13 21365378 21365488 -98918824 + PB1D9 SINE Alu 10 119 -1 6 748 340 137 27 14 chr13 21366320 21366394 -98917918 + CT-rich Low_complexity Low_complexity 4 78 0 6 748 1151 102 11 0 chr13 21366395 21366571 -98917741 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 6 748 217 265 0 0 chr13 21366657 21366706 -98917606 - PB1D10 SINE Alu -59 58 10 6 748 418 229 75 19 chr13 21367288 21367395 -98916917 + PB1D7 SINE Alu 6 118 -2 6 748 21 0 0 0 chr13 21367677 21367698 -98916614 + AT_rich Low_complexity Low_complexity 1 21 0 6 748 624 54 0 0 chr13 21367824 21367898 -98916414 + tRNA-Thr-ACG_ tRNA tRNA 1 74 -3 6 748 207 0 0 0 chr13 21368522 21368545 -98915767 + (TGG)n Simple_repeat Simple_repeat 2 24 0 6 748 438 193 81 18 chr13 21368763 21368874 -98915438 - PB1D9 SINE Alu -1 119 2 6 748 273 283 120 0 chr13 21370415 21370507 -98913805 - MT2A LTR ERVL -162 371 269 6 748 1102 112 6 6 chr13 21370581 21370760 -98913552 + (TTC)n Simple_repeat Simple_repeat 2 180 0 6 748 459 0 0 0 chr13 21370762 21370813 -98913499 + (TTTC)n Simple_repeat Simple_repeat 2 52 0 6 748 265 274 0 0 chr13 21370837 21370899 -98913413 - MTE2b LTR MaLR -243 136 75 6 748 258 32 0 0 chr13 21371228 21371259 -98913053 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 748 437 191 59 34 chr13 21371264 21371383 -98912929 - B1_Mur2 SINE Alu -10 139 18 6 748 671 0 0 0 chr13 21371564 21371636 -98912676 + tRNA-Arg-CGA tRNA tRNA 1 72 -4 6 748 23 0 0 0 chr13 21371896 21371919 -98912393 + AT_rich Low_complexity Low_complexity 1 23 0 6 748 967 67 104 0 chr13 21371927 21372061 -98912251 + B1_Mus1 SINE Alu 1 148 0 6 748 345 212 0 0 chr13 21372436 21372502 -98911810 - ID_B1 SINE B4 -37 187 122 6 748 343 235 36 0 chr13 21372560 21372653 -98911659 - MTD LTR MaLR -282 137 36 6 748 867 289 118 39 chr13 21372695 21372966 -98911346 - Lx9 LINE L1 -38 7606 7330 6 748 3038 52 20 18 chr13 21372966 21373361 -98910951 + MTA_Mm LTR MaLR 1 396 0 6 748 867 289 118 39 chr13 21373361 21373597 -98910715 - Lx9 LINE L1 -315 7329 7059 6 748 267 251 37 2 chr13 21374169 21374260 -98910052 - B1F SINE Alu -19 101 10 6 748 22 0 0 0 chr13 21374274 21374296 -98910016 + AT_rich Low_complexity Low_complexity 1 22 0 6 748 1314 153 71 12 chr13 21374344 21374464 -98909848 - RMER1B Other Other -2 1064 942 6 748 1610 115 8 0 chr13 21374464 21374708 -98909604 + Lx3_Mus LINE L1 6764 7009 0 6 748 249 33 0 0 chr13 21374715 21374745 -98909567 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 6 748 1314 153 71 12 chr13 21374745 21374868 -98909444 - RMER1B Other Other -130 936 799 6 748 388 247 0 0 chr13 21374922 21375011 -98909301 + (TTG)n Simple_repeat Simple_repeat 2 90 0 6 748 702 208 244 0 chr13 21375011 21375179 -98909133 + B3 SINE B2 2 210 -6 6 748 367 234 8 5 chr13 21375195 21375313 -98908999 + RMER12 LTR ERVK 491 583 -1225 6 748 345 279 34 84 chr13 21375332 21375589 -98908723 + RMER12 LTR ERVK 604 1010 -394 6 748 405 215 0 0 chr13 21375655 21375748 -98908564 + CT-rich Low_complexity Low_complexity 1 93 0 6 748 933 204 43 59 chr13 21375750 21376008 -98908304 + RMER12 LTR ERVK 996 1303 -19 6 748 219 103 0 0 chr13 21376237 21376276 -98908036 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 7 748 300 233 231 37 chr13 21376299 21376318 -98907994 - B4A SINE B4 -46 246 92 7 748 451 291 0 0 chr13 21376318 21376428 -98907884 - PB1D10 SINE Alu 0 117 8 7 748 1927 120 257 67 chr13 21377277 21377700 -98906612 + MT2B LTR ERVL 18 551 -50 7 748 3092 49 200 9 chr13 21377700 21378130 -98906182 + RLTR1B LTR ERV1 1 512 0 7 748 1927 120 257 67 chr13 21378130 21378197 -98906115 + MT2B LTR ERVL 552 601 0 7 748 237 283 22 163 chr13 21378843 21378978 -98905334 - PB1D10 SINE Alu 0 117 2 7 748 566 228 8 0 chr13 21379741 21379864 -98904448 - ID_B1 SINE B4 0 224 101 7 748 194 258 0 88 chr13 21379869 21379937 -98904375 + MIR3 SINE MIR 112 173 -35 7 748 180 0 0 0 chr13 21381476 21381496 -98902816 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 748 255 93 0 0 chr13 21381780 21381823 -98902489 + (A)n Simple_repeat Simple_repeat 1 43 0 7 748 276 327 9 0 chr13 21382211 21382318 -98901994 - PB1D10 SINE Alu -7 110 3 7 748 255 286 45 109 chr13 21382870 21382980 -98901332 - MER58B DNA MER1_type -16 325 223 7 748 757 273 20 10 chr13 21384986 21385163 -98899149 + B3A SINE B2 1 179 -19 7 748 423 0 0 0 chr13 21385163 21385210 -98899102 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 748 757 291 22 38 chr13 21385210 21385252 -98899060 + B3A SINE B2 180 212 -4 7 748 636 277 93 17 chr13 21385844 21386379 -98897933 - L1MA4 LINE L1 -1655 5989 5351 7 748 520 246 63 0 chr13 21386381 21386507 -98897805 - ID_B1 SINE B4 0 224 91 7 748 516 77 0 0 chr13 21386571 21386649 -98897663 + (TG)n Simple_repeat Simple_repeat 1 78 0 7 748 1208 254 21 14 chr13 21387389 21387672 -98896640 + RMER1B Other Other 1 285 -781 7 748 395 239 84 28 chr13 21387756 21387898 -98896414 + ORR1D2 LTR MaLR 147 296 -74 7 748 930 9 0 0 chr13 21387904 21388011 -98896301 + (TTC)n Simple_repeat Simple_repeat 1 107 0 7 748 305 230 56 71 chr13 21388687 21388862 -98895450 - L1M2 LINE L1 -4282 2300 2064 7 748 800 167 0 0 chr13 21388874 21389006 -98895306 - B1_Mus2 SINE Alu -6 141 10 7 748 195 129 0 0 chr13 21389012 21389043 -98895269 + (TTTTC)n Simple_repeat Simple_repeat 3 33 0 7 748 1155 49 14 0 chr13 21389059 21389203 -98895109 - B1_Mus1 SINE Alu -1 147 2 7 748 22 0 0 0 chr13 21389966 21389988 -98894324 + AT_rich Low_complexity Low_complexity 1 22 0 7 748 902 215 177 14 chr13 21390888 21391168 -98893144 - MTD LTR MaLR -18 361 2 7 748 519 184 322 0 chr13 21391750 21391902 -98892410 - B3 SINE B2 -14 202 2 7 748 710 215 173 41 chr13 21394762 21395005 -98889307 - Lx8 LINE L1 -1057 6416 6142 7 748 971 276 75 37 chr13 21395054 21395532 -98888780 - Lx7 LINE L1 -1596 6048 5583 7 748 275 295 121 56 chr13 21395675 21396031 -98888281 - LTR40b LTR ERVL -4 458 80 7 748 471 252 18 18 chr13 21396332 21396441 -98887871 - PB1D7 SINE Alu -3 117 9 7 748 1509 189 124 9 chr13 21396652 21396999 -98887313 - MTD LTR MaLR -8 411 25 7 748 411 113 0 0 chr13 21397123 21397185 -98887127 + (TG)n Simple_repeat Simple_repeat 2 63 0 7 748 226 269 29 15 chr13 21397283 21397351 -98886961 + L1M5 LINE L1 5647 5715 -729 7 748 333 143 85 61 chr13 21397353 21397435 -98886877 - MTD LTR MaLR -32 387 304 7 748 577 295 54 49 chr13 21397816 21398019 -98886293 + B4A SINE B4 1 204 -88 7 748 267 292 31 10 chr13 21398236 21398333 -98885979 + ID_B1 SINE B4 78 176 -48 7 748 361 252 30 0 chr13 21398246 21398345 -98885967 + PB1D10 SINE Alu 6 107 -10 7 748 974 363 73 27 chr13 21398358 21398987 -98885325 + MER21B LTR ERV1 20 677 -186 7 748 207 0 0 0 chr13 21398991 21399014 -98885298 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 748 425 295 61 23 chr13 21399326 21399519 -98884793 + MLT1D LTR MaLR 36 225 -402 7 748 450 189 21 21 chr13 21399715 21399812 -98884500 - PB1D10 SINE Alu -9 108 12 7 748 230 36 0 0 chr13 21399815 21399843 -98884469 - L1M LINE L1 -950 5362 5335 7 748 471 234 88 56 chr13 21399855 21400071 -98884241 - MLT1-int LTR MaLR -1031 340 1 7 748 446 256 0 104 chr13 21401086 21401221 -98883091 + B1F SINE Alu 12 132 -17 7 748 288 0 0 0 chr13 21401443 21401475 -98882837 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 748 908 201 35 75 chr13 21401840 21402039 -98882273 + B3 SINE B2 1 191 -25 7 748 409 170 40 0 chr13 21402041 21402141 -98882171 + GA-rich Low_complexity Low_complexity 2 105 0 7 748 1875 148 129 16 chr13 21402145 21402230 -98882082 + MTC LTR MaLR 1 107 -314 7 748 2857 37 76 0 chr13 21402230 21402585 -98881727 - L1Md_T LINE L1 0 6582 6201 7 748 1875 148 129 16 chr13 21402585 21402870 -98881442 + MTC LTR MaLR 108 413 -8 7 748 437 284 83 74 chr13 21402878 21403095 -98881217 + ID_B1 SINE B4 3 221 -3 7 748 308 340 46 26 chr13 21403104 21403255 -98881057 + RSINE1 SINE B4 4 157 -8 7 748 1173 63 0 0 chr13 21403279 21403421 -98880891 - B1_Mus1 SINE Alu -5 143 2 7 748 522 46 0 0 chr13 21404219 21404284 -98880028 + (TG)n Simple_repeat Simple_repeat 1 65 0 7 748 219 114 0 0 chr13 21404742 21404777 -98879535 + (G)n Simple_repeat Simple_repeat 1 35 0 7 748 221 294 86 11 chr13 21405094 21405187 -98879125 - MER5A DNA MER1_type -50 139 40 7 748 693 279 204 18 chr13 21405890 21406212 -98878100 - MER90a LTR ERV1 -22 592 225 7 748 288 0 0 0 chr13 21406212 21406244 -98878068 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 748 693 279 204 18 chr13 21406244 21406308 -98878004 - MER90a LTR ERV1 -390 224 135 7 748 340 243 0 14 chr13 21406410 21406481 -98877831 + ID2 SINE ID 3 72 -11 7 748 233 320 10 30 chr13 21406493 21406593 -98877719 + PB1D10 SINE Alu 15 112 -5 7 748 578 304 68 61 chr13 21406608 21406888 -98877424 + B4A SINE B4 1 282 -10 7 748 297 75 0 0 chr13 21406889 21406929 -98877383 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 748 567 0 0 0 chr13 21406994 21407057 -98877255 + (CAG)n Simple_repeat Simple_repeat 1 63 0 7 748 236 245 217 4 chr13 21407469 21407561 -98876751 - PB1D7 SINE Alu -6 114 5 7 748 603 208 8 8 chr13 21407824 21407950 -98876362 + ID_B1 SINE B4 92 217 -7 7 748 221 71 71 0 chr13 21408238 21408280 -98876032 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 7 748 552 289 0 13 chr13 21408281 21408432 -98875880 - B1F2 SINE Alu 0 149 1 7 748 487 275 29 7 chr13 21410109 21410248 -98874064 + B1F2 SINE Alu 8 149 0 7 748 241 158 0 0 chr13 21410296 21410334 -98873978 + B1F SINE Alu 6 43 -106 7 748 212 186 17 0 chr13 21410337 21410396 -98873916 + (TA)n Simple_repeat Simple_repeat 2 61 0 7 748 422 228 0 0 chr13 21410406 21410485 -98873827 - B1_Mus2 SINE Alu -67 80 2 7 748 299 265 14 14 chr13 21411650 21411719 -98872593 - PB1D10 SINE Alu -27 90 22 7 748 3085 47 44 0 chr13 21412597 21412980 -98871332 - MTB LTR MaLR 0 400 1 7 748 337 212 310 54 chr13 21412986 21413225 -98871087 - ORR1E LTR MaLR -6 353 54 7 748 312 250 0 0 chr13 21413812 21413876 -98870436 - B1F1 SINE Alu -75 74 11 7 748 189 0 0 0 chr13 21414371 21414392 -98869920 + (TAAAAA)n Simple_repeat Simple_repeat 2 22 0 7 748 297 0 0 0 chr13 21414482 21414515 -98869797 + (A)n Simple_repeat Simple_repeat 1 33 0 7 748 605 66 0 0 chr13 21414681 21414757 -98869555 + tRNA-Thr-ACY_ tRNA tRNA 1 76 -1 7 748 213 317 87 33 chr13 21415396 21415546 -98868766 - L2a LINE L2 0 3426 3269 7 748 687 229 50 25 chr13 21415699 21415860 -98868452 - RSINE1 SINE B4 0 165 1 7 748 1025 122 7 0 chr13 21416281 21416428 -98867884 - B1_Mus1 SINE Alu 0 148 1 7 748 225 275 49 24 chr13 21416607 21416689 -98867623 - PB1D10 SINE Alu 0 117 34 7 748 351 302 71 45 chr13 21416991 21417038 -98867274 - MER67B LTR ERV1 -149 512 461 7 748 324 0 0 0 chr13 21417038 21417074 -98867238 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 7 748 351 302 71 45 chr13 21417074 21417224 -98867088 - MER67B LTR ERV1 -201 460 311 7 748 377 265 38 38 chr13 21417466 21417572 -98866740 + PB1D10 SINE Alu 1 106 -11 7 748 244 331 32 0 chr13 21417939 21418033 -98866279 - B1F1 SINE Alu -19 98 5 7 748 594 68 0 0 chr13 21418585 21418658 -98865654 - tRNA-Met tRNA tRNA -3 73 1 7 748 304 313 80 0 chr13 21418785 21418935 -98865377 - RMER30 DNA MER1_type -5 197 36 7 748 355 187 30 81 chr13 21419279 21419378 -98864934 - PB1D7 SINE Alu 0 120 27 7 748 254 266 38 12 chr13 21419844 21419924 -98864388 + tRNA-Leu-CTA_ tRNA tRNA 1 82 -3 7 748 1440 271 84 50 chr13 21420491 21421027 -98863285 + RMER15 LTR ERVL 22 575 0 7 748 360 0 0 0 chr13 21421141 21421181 -98863131 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 748 36549 42 0 3 chr13 21421655 21426977 -98857335 + L1Md_T LINE L1 188 5589 -297 7 748 8637 32 0 0 chr13 21426977 21427973 -98856339 + L1Md_T LINE L1 5590 6585 0 7 748 420 257 183 7 chr13 21428322 21428475 -98855837 + MTEa LTR MaLR 1 180 -199 7 748 218 256 0 137 chr13 21428534 21428629 -98855683 + PB1D9 SINE Alu 22 103 -17 7 748 428 51 0 17 chr13 21428639 21428699 -98855613 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 748 404 272 87 9 chr13 21429012 21429127 -98855185 - B1_Mur3 SINE Alu -25 124 1 7 748 854 310 34 58 chr13 21429152 21429566 -98854746 - RMER15-int LTR ERVL -4593 406 3 7 748 492 217 166 18 chr13 21429566 21429601 -98854711 - RMER15 LTR ERVL 0 575 529 7 748 279 0 0 0 chr13 21429601 21429632 -98854680 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 748 492 217 166 18 chr13 21429632 21429765 -98854547 - RMER15 LTR ERVL -47 528 382 7 748 1238 138 37 0 chr13 21429926 21430114 -98854198 - B2_Mm2 SINE B2 0 195 1 7 748 601 252 23 0 chr13 21430169 21430300 -98854012 - ID_B1 SINE B4 -1 223 90 8 748 256 330 32 0 chr13 21430303 21430397 -98853915 + L1MC LINE L1 5510 5606 -2276 8 748 273 207 35 0 chr13 21430402 21430489 -98853823 + (TA)n Simple_repeat Simple_repeat 2 91 0 8 748 769 246 138 38 chr13 21430494 21430927 -98853385 - MT2B LTR ERVL -84 517 1 8 748 188 146 67 11 chr13 21430929 21431019 -98853293 + (TAGA)n Simple_repeat Simple_repeat 3 97 0 8 748 238 209 56 67 chr13 21431097 21431276 -98853036 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 8 748 469 260 87 58 chr13 21431824 21432032 -98852280 - B3 SINE B2 -1 215 2 8 748 286 284 56 75 chr13 21432040 21432200 -98852112 - ID_B1 SINE B4 -5 219 63 8 748 784 138 27 55 chr13 21432914 21433060 -98851252 - B1_Mm SINE Alu 0 147 6 8 748 2434 87 16 3 chr13 21433543 21433866 -98850446 + ORR1A2 LTR MaLR 1 327 0 8 748 569 254 28 0 chr13 21434378 21434520 -98849792 + ID_B1 SINE B4 78 223 -1 8 748 484 204 19 0 chr13 21434669 21434772 -98849540 + ID_B1 SINE B4 86 190 -34 8 748 306 287 52 0 chr13 21434772 21434784 -98849528 + B1_Mus2 SINE Alu 5 125 -22 8 748 648 250 40 51 chr13 21435363 21435540 -98848772 - B3A SINE B2 -16 182 8 8 748 694 268 51 50 chr13 21437756 21438062 -98846250 - L1MC1 LINE L1 -13 6320 6026 8 748 316 312 13 0 chr13 21439828 21439905 -98844407 - PB1D10 SINE Alu -39 78 1 8 748 215 291 0 68 chr13 21439859 21439918 -98844394 - B4 SINE B4 -161 131 77 8 748 1972 258 109 22 chr13 21439933 21440519 -98843793 + Lx7 LINE L1 6264 6900 -796 8 748 700 103 76 8 chr13 21441114 21441232 -98843080 - RLTR20B3 LTR ERVK -451 126 1 8 748 582 71 36 0 chr13 21441232 21441304 -98843008 - MT2B LTR ERVL -491 110 36 8 748 3631 141 71 9 chr13 21441247 21441898 -98842414 - ORR1A3-int LTR MaLR -1258 705 15 8 748 1994 159 41 82 chr13 21441894 21442217 -98842095 + ORR1A4-int LTR MaLR 1027 1339 -170 8 748 987 88 225 6 chr13 21442217 21442377 -98841935 - B2_Mm2 SINE B2 0 195 1 8 748 1994 148 6 252 chr13 21442377 21442585 -98841727 + ORR1A4-int LTR MaLR 1340 1472 -37 8 748 2108 121 12 9 chr13 21442587 21442913 -98841399 + ORR1A4 LTR MaLR 3 329 0 8 748 376 200 53 0 chr13 21442913 21442988 -98841324 - MTC LTR MaLR -342 79 1 8 748 925 228 185 16 chr13 21443451 21443705 -98840607 - Lx5 LINE L1 0 7050 6754 8 748 23 0 0 0 chr13 21444183 21444206 -98840106 + AT_rich Low_complexity Low_complexity 1 23 0 8 748 1221 259 80 61 chr13 21444273 21444783 -98839529 + RMER5 LTR ERV1 15 534 0 8 748 259 272 21 11 chr13 21444797 21444890 -98839422 + L1MC4 LINE L1 6771 6864 -1178 8 748 236 53 26 0 chr13 21445122 21445160 -98839152 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 748 7069 53 16 0 chr13 21445166 21446029 -98838283 - L1_Mus1 LINE L1 -1 6566 5690 8 748 754 211 28 45 chr13 21446029 21446342 -98837970 - RMER17C LTR ERVK -321 488 1 8 748 360 111 0 0 chr13 21446530 21446593 -98837719 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 748 607 90 0 0 chr13 21447249 21447327 -98836985 + L1_Mm LINE L1 5571 5648 -235 8 748 397 246 54 18 chr13 21447327 21447439 -98836873 + RMER17C LTR ERVK 266 381 -29 8 748 465 238 100 130 chr13 21447459 21447573 -98836739 + MERVK26-int LTR ERVK 1 109 -3129 8 748 2466 93 9 0 chr13 21447573 21447897 -98836415 - ORR1A2 LTR MaLR 0 327 1 8 748 465 238 100 130 chr13 21447897 21448043 -98836269 + MERVK26-int LTR ERVK 110 253 -2985 8 748 615 27 0 0 chr13 21448043 21448116 -98836196 + (TC)n Simple_repeat Simple_repeat 1 73 0 8 748 293 302 55 28 chr13 21448252 21448361 -98835951 + ORR1E LTR MaLR 1 112 -247 8 748 21 36 0 0 chr13 21448395 21448423 -98835889 + AT_rich Low_complexity Low_complexity 1 28 0 8 748 2619 86 8 47 chr13 21448423 21448803 -98835509 + MERVK26-int LTR ERVK 528 892 -6027 8 748 315 0 0 0 chr13 21449073 21449108 -98835204 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 748 898 254 15 0 chr13 21449120 21449321 -98834991 - B3 SINE B2 -10 206 3 8 748 1755 221 30 155 chr13 21450417 21450992 -98833320 + RMER19C LTR ERVK 5 494 -117 8 748 4438 108 93 22 chr13 21450992 21451748 -98832564 + RMER17D2 LTR ERVK 1 809 0 8 748 1755 221 30 155 chr13 21451748 21451863 -98832449 + RMER19C LTR ERVK 495 609 -2 8 748 4834 49 2 8 chr13 21452071 21452667 -98831645 - L1Md_F2 LINE L1 -2 6580 5989 8 748 192 40 0 0 chr13 21453010 21453035 -98831277 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 8 748 1205 54 0 20 chr13 21453054 21453204 -98831108 - B1_Mus1 SINE Alu 0 148 2 8 748 613 244 158 18 chr13 21453205 21453407 -98830905 + RMER5 LTR ERV1 68 302 -232 8 748 3256 65 2 0 chr13 21453407 21453806 -98830506 + MTB LTR MaLR 1 400 0 8 748 613 244 158 18 chr13 21453806 21453875 -98830437 + RMER5 LTR ERV1 303 376 -158 8 748 189 0 0 0 chr13 21454125 21454146 -98830166 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 8 748 257 323 21 0 chr13 21456065 21456158 -98828154 - PB1D10 SINE Alu -22 95 1 8 748 186 43 0 0 chr13 21456277 21456300 -98828012 + (GAA)n Simple_repeat Simple_repeat 3 25 0 8 748 261 304 44 18 chr13 21456386 21456500 -98827812 + PB1D10 SINE Alu 1 117 0 8 748 249 283 0 0 chr13 21456502 21456562 -98827750 + tRNA-Ala-GCY_ tRNA tRNA 1 60 -15 8 748 422 246 79 7 chr13 21456761 21456900 -98827412 + RMER15 LTR ERVL 411 559 -16 8 748 246 290 20 51 chr13 21457259 21457357 -98826955 + MER20 DNA MER1_type 4 98 -121 8 748 232 349 116 0 chr13 21457825 21458014 -98826298 - L2 LINE L2 -453 2966 2756 8 748 380 260 120 0 chr13 21458071 21458171 -98826141 - B3A SINE B2 -86 112 1 8 748 271 238 0 31 chr13 21458797 21458862 -98825450 - ID4_ SINE ID -20 63 1 8 748 1108 82 0 0 chr13 21459463 21459621 -98824691 + B2_Mm2 SINE B2 1 158 -37 8 748 216 0 0 0 chr13 21459621 21459645 -98824667 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 8 748 474 291 47 13 chr13 21459935 21460085 -98824227 + RSINE1 SINE B4 5 159 -6 8 748 352 261 53 53 chr13 21460738 21461040 -98823272 + MMSAT4 Satellite Satellite 1 302 -2 8 748 225 308 76 9 chr13 21461029 21461134 -98823178 + MurSatRep1 Unknown Unknown 1691 1802 -335 8 748 380 280 35 28 chr13 21461208 21461427 -98822885 + MMSAT4 Satellite Satellite 1 220 -10 8 748 351 250 0 45 chr13 21462193 21462281 -98822031 + PB1D10 SINE Alu 6 89 -28 8 748 939 191 56 15 chr13 21462312 21462509 -98821803 + B3 SINE B2 1 205 -11 8 748 218 192 267 27 chr13 21462724 21462799 -98821513 + PB1 SINE Alu 24 116 -11 8 748 578 212 43 35 chr13 21462998 21463187 -98821125 + B3 SINE B2 2 195 0 8 748 334 198 132 114 chr13 21463971 21464147 -98820165 + B3A SINE B2 17 181 -14 8 748 241 233 187 27 chr13 21464256 21464331 -98819981 + PB1D10 SINE Alu 9 95 -22 8 748 354 275 188 18 chr13 21464588 21464758 -98819554 + L1MDa LINE L1 25 223 -6410 8 748 625 288 18 12 chr13 21464848 21465013 -98819299 - B3 SINE B2 -8 208 43 8 748 609 292 21 73 chr13 21465092 21465192 -98819120 - B3A SINE B2 -16 182 96 8 748 4528 99 54 41 chr13 21465192 21465991 -98818321 - RMER17D2 LTR ERVK 0 809 1 8 748 609 292 21 73 chr13 21465991 21466082 -98818230 - B3A SINE B2 -103 95 1 8 748 349 238 49 18 chr13 21466225 21466386 -98817926 - B3 SINE B2 0 216 6 8 748 214 29 0 54 chr13 21466386 21466423 -98817889 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 8 748 385 352 7 0 chr13 21466424 21466566 -98817746 - ID_B1 SINE B4 -1 223 81 8 748 204 40 0 0 chr13 21466573 21466598 -98817714 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 8 748 472 174 0 0 chr13 21466622 21466691 -98817621 + ID4_ SINE ID 2 70 -13 8 748 231 158 0 0 chr13 21466767 21466805 -98817507 + L1M2 LINE L1 2554 2591 -3552 8 748 2041 70 63 0 chr13 21466817 21467118 -98817194 + ORR1A2 LTR MaLR 1 320 -7 8 748 632 293 6 30 chr13 21467421 21467590 -98816722 + RSINE1 SINE B4 1 165 0 8 748 573 260 77 50 chr13 21467621 21467803 -98816509 - B3A SINE B2 -10 188 2 8 748 525 200 62 18 chr13 21468427 21468539 -98815773 + PB1D10 SINE Alu 1 117 0 8 748 237 265 0 0 chr13 21468965 21469014 -98815298 + polypurine Low_complexity Low_complexity 4 52 0 8 748 1284 102 21 0 chr13 21469171 21469358 -98814954 + B2_Mm1t SINE B2 2 192 -1 8 748 380 159 0 14 chr13 21469444 21469514 -98814798 + ORR1D2 LTR MaLR 9 77 -293 8 748 917 230 138 48 chr13 21469506 21469839 -98814473 - ORR1D2 LTR MaLR -6 364 2 8 748 935 211 81 47 chr13 21469842 21470076 -98814236 + ORR1D2 LTR MaLR 69 310 -60 8 748 1540 225 125 9 chr13 21470076 21470460 -98813852 + Lx7 LINE L1 5748 6183 -1513 8 748 459 0 0 0 chr13 21470460 21470511 -98813801 + (CATA)n Simple_repeat Simple_repeat 2 52 0 8 748 1540 206 74 15 chr13 21470511 21470810 -98813502 + Lx7 LINE L1 6184 6492 -1204 8 748 491 201 25 63 chr13 21470986 21471145 -98813167 + RLTR43A LTR ERVK 212 364 0 8 748 3357 162 72 25 chr13 21471145 21471224 -98813088 + Lx7 LINE L1 6490 6596 -1100 8 748 2565 137 15 5 chr13 21471224 21471614 -98812698 + ORR1B1 LTR MaLR 1 394 0 8 748 3357 162 72 25 chr13 21471614 21472135 -98812177 + Lx7 LINE L1 6597 7118 -578 8 748 404 205 51 0 chr13 21472141 21472219 -98812093 + Lx7 LINE L1 7037 7118 -578 8 748 744 257 79 0 chr13 21472225 21472427 -98811885 + Lx7 LINE L1 7037 7254 -442 8 748 215 79 26 0 chr13 21472427 21472465 -98811847 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 8 748 939 172 26 97 chr13 21473025 21473251 -98811061 + Lx7 LINE L1 7247 7456 -240 8 748 801 162 71 62 chr13 21474202 21474426 -98809886 + Lx7 LINE L1 7453 7678 -18 8 748 260 159 28 28 chr13 21474448 21474519 -98809793 + ORR1D2 LTR MaLR 298 368 -2 8 748 1223 111 67 0 chr13 21475161 21475341 -98808971 - B2_Mm2 SINE B2 -3 192 1 8 748 523 241 2 0 chr13 21475627 21475745 -98808567 + ID_B1 SINE B4 85 198 -26 8 748 780 269 100 23 chr13 21475825 21476215 -98808097 + MLT2B4 LTR ERVL 52 464 0 8 748 928 206 55 78 chr13 21476337 21476708 -98807604 + RMER16 LTR ERVK 1 533 0 8 748 2456 85 193 0 chr13 21476839 21477285 -98807027 + RLTR47_MM LTR ERV1 1 532 0 8 748 1187 77 32 8 chr13 21477606 21477795 -98806517 + B2_Mm2 SINE B2 2 210 -6 8 748 24 0 0 0 chr13 21477947 21477971 -98806341 + AT_rich Low_complexity Low_complexity 1 24 0 9 748 728 229 50 0 chr13 21478136 21478315 -98805997 - B3 SINE B2 -25 191 4 9 748 613 175 17 9 chr13 21478342 21478457 -98805855 - B1_Mus1 SINE Alu 0 148 33 9 748 228 67 0 0 chr13 21478935 21478965 -98805347 + (T)n Simple_repeat Simple_repeat 1 30 0 9 748 378 292 30 30 chr13 21480047 21480387 -98803925 - MMSAT4 Satellite Satellite -14 340 1 9 748 348 319 172 23 chr13 21480947 21481105 -98803207 + MTD-int LTR MaLR 1161 1333 -247 9 748 942 172 41 41 chr13 21481105 21481299 -98803013 - B2_Mm2 SINE B2 0 195 2 9 748 371 220 91 58 chr13 21481299 21481483 -98802829 + MTD-int LTR MaLR 1082 1233 -25 9 748 743 216 83 16 chr13 21481500 21481693 -98802619 + MTD LTR MaLR 1 206 -213 9 748 1520 58 19 107 chr13 21481700 21481970 -98802342 - ORR1A2 LTR MaLR -8 319 74 9 748 603 193 89 47 chr13 21481969 21482159 -98802153 + MTD LTR MaLR 222 419 0 9 748 2148 142 12 42 chr13 21482250 21482655 -98801657 + MTB_Mm LTR MaLR 1 393 -14 9 748 4903 151 151 18 chr13 21482666 21483615 -98800697 + MTB_Mm-int LTR MaLR 2 1085 -173 9 748 1194 48 0 13 chr13 21483615 21483764 -98800548 - B1_Mus2 SINE Alu 0 147 1 9 748 1066 79 79 68 chr13 21483767 21483957 -98800355 - B2_Mm2 SINE B2 -3 192 1 9 748 4903 151 151 18 chr13 21483957 21484020 -98800292 + MTB_Mm-int LTR MaLR 1086 1143 -115 9 748 1937 122 24 59 chr13 21484020 21484359 -98799953 + ORR1A2 LTR MaLR 1 327 0 9 748 4903 151 151 18 chr13 21484359 21484435 -98799877 + MTB_Mm-int LTR MaLR 1144 1238 -20 9 748 1979 152 8 50 chr13 21484431 21484813 -98799499 + MTB_Mm LTR MaLR 42 407 0 9 748 2175 219 22 5 chr13 21485260 21485672 -98798640 + MTD LTR MaLR 1 419 0 9 748 257 295 0 0 chr13 21485823 21485901 -98798411 - MurSatRep1 Unknown Unknown -1391 746 669 9 748 713 194 46 23 chr13 21486061 21486225 -98798087 + B3 SINE B2 8 184 -9 9 748 700 230 211 15 chr13 21488596 21488856 -98795456 + MTEa LTR MaLR 69 379 0 9 748 1541 244 178 4 chr13 21488846 21489392 -98794920 + MTEa-int LTR MaLR 4 644 -936 9 748 268 341 43 36 chr13 21489647 21489787 -98794525 + MIR SINE MIR 15 155 -107 9 748 429 300 7 14 chr13 21490435 21490577 -98793735 + B1F2 SINE Alu 1 141 -8 9 748 301 200 0 0 chr13 21490823 21490878 -98793434 - MER20 DNA MER1_type -77 142 88 9 748 938 253 30 75 chr13 21490936 21491231 -98793081 + B4A SINE B4 1 282 -10 9 748 274 227 15 0 chr13 21492092 21492158 -98792154 - PB1D7 SINE Alu -51 69 3 9 748 313 297 65 7 chr13 21492335 21492474 -98791838 + MER5B DNA MER1_type 29 175 -3 9 748 242 190 70 23 chr13 21492843 21492929 -98791383 + GA-rich Low_complexity Low_complexity 3 92 0 9 748 198 0 0 0 chr13 21493294 21493316 -98790996 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 9 748 225 0 0 0 chr13 21493730 21493755 -98790557 + (A)n Simple_repeat Simple_repeat 1 25 0 9 748 494 267 92 35 chr13 21493995 21494224 -98790088 - MIR SINE MIR 0 262 21 9 748 209 139 23 0 chr13 21494926 21494969 -98789343 + (TATG)n Simple_repeat Simple_repeat 4 47 0 9 748 1000 275 95 63 chr13 21494979 21495518 -98788794 - Lx9 LINE L1 -130 7514 6959 9 748 22 35 0 0 chr13 21495746 21495775 -98788537 + AT_rich Low_complexity Low_complexity 1 29 0 9 93 1124 69 7 0 chr13 21495799 21495944 -98788368 - B1_Mus2 SINE Alu 0 147 2 9 749 329 193 141 70 chr13 21496210 21496338 -98787974 + B1F SINE Alu 13 149 0 9 749 810 173 74 0 chr13 21496404 21496566 -98787746 - URR1A DNA MER1_type -47 179 6 9 749 505 294 105 30 chr13 21496644 21496767 -98787545 - L1MA4 LINE L1 -375 5925 5801 9 749 270 0 0 0 chr13 21496767 21496797 -98787515 + (TCTA)n Simple_repeat Simple_repeat 3 32 0 9 749 505 294 105 30 chr13 21496797 21496968 -98787344 - L1MA4 LINE L1 -500 5800 5611 9 749 288 228 76 0 chr13 21496964 21497043 -98787269 - L1MA4 LINE L1 -910 5233 5149 9 749 225 0 0 0 chr13 21497074 21497099 -98787213 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 749 297 0 0 0 chr13 21497099 21497132 -98787180 + (CCA)n Simple_repeat Simple_repeat 3 35 0 9 749 598 100 150 0 chr13 21497132 21497232 -98787080 - B2_Mm2 SINE B2 -56 139 25 9 749 435 279 23 0 chr13 21497310 21497439 -98786873 - L1MA4 LINE L1 -1080 5060 4929 9 749 909 234 43 24 chr13 21497550 21497760 -98786552 - B3 SINE B2 -2 214 1 9 749 582 292 98 27 chr13 21497791 21497974 -98786338 + ID_B1 SINE B4 1 196 -28 9 749 241 319 101 50 chr13 21497869 21497988 -98786324 + B1_Mus2 SINE Alu 5 129 -18 9 749 250 299 124 13 chr13 21497986 21498220 -98786092 + Arthur1B DNA Tip100 930 1189 -36 9 749 23 0 0 0 chr13 21498327 21498350 -98785962 + AT_rich Low_complexity Low_complexity 1 23 0 9 749 488 298 0 31 chr13 21498354 21498482 -98785830 + ID_B1 SINE B4 91 214 -10 9 749 184 392 48 20 chr13 21498521 21498667 -98785645 + L2 LINE L2 2650 2799 -620 9 749 821 101 45 45 chr13 21499844 21499999 -98784313 - URR1A DNA MER1_type -14 212 58 9 749 258 250 0 0 chr13 21500000 21500052 -98784260 - URR1B DNA MER1_type -169 56 5 1 749 260 254 14 27 chr13 21500720 21500793 -98783519 - ID2 SINE ID -10 73 2 2 749 229 256 0 124 chr13 21500802 21500891 -98783421 - ID4 SINE ID -3 80 3 3 749 591 165 227 12 chr13 21501019 21501191 -98783121 - B3 SINE B2 -3 213 5 4 749 219 238 0 0 chr13 21501703 21501745 -98782567 + L2a LINE L2 3378 3419 -7 5 749 255 284 135 0 chr13 21503380 21503454 -98780858 - MLT1H2 LTR MaLR -325 164 81 6 749 675 240 0 20 chr13 21503585 21503734 -98780578 - B1_Mur1 SINE Alu -2 147 2 7 749 408 377 95 37 chr13 21504347 21504410 -98779902 - MLT1F1 LTR MaLR -7 562 502 8 749 1215 70 94 0 chr13 21504410 21504581 -98779731 + B2_Mm2 SINE B2 1 187 -8 9 749 408 377 95 37 chr13 21504581 21504812 -98779500 - MLT1F1 LTR MaLR -68 501 251 8 749 22 0 0 0 chr13 21504988 21505010 -98779302 + AT_rich Low_complexity Low_complexity 1 22 0 1 749 3993 151 36 10 chr13 21505056 21505731 -98778581 - RLTR17 LTR ERVK 0 692 1 1 749 326 205 14 22 chr13 21505876 21505964 -98778348 - RSINE1 SINE B4 -195 97 10 1 749 593 244 35 74 chr13 21506497 21506935 -98777377 - RMER17C LTR ERVK -22 388 1 1 749 589 284 84 5 chr13 21507524 21507715 -98776597 - B3 SINE B2 0 216 11 1 749 402 294 7 29 chr13 21507715 21507855 -98776457 - RLTR42-int LTR ERVK -4193 1329 1193 1 749 315 0 0 0 chr13 21507855 21507890 -98776422 + (T)n Simple_repeat Simple_repeat 1 35 0 1 749 402 264 172 33 chr13 21507950 21508130 -98776182 - MLT1F1 LTR MaLR -311 258 54 8 749 188 341 81 0 chr13 21508811 21508934 -98775378 + MIR SINE MIR 92 224 -38 1 749 312 293 68 19 chr13 21509579 21509791 -98774521 + MMSAT4 Satellite Satellite 1 222 0 1 749 786 20 0 0 chr13 21509913 21510013 -98774299 + L1_Mus1 LINE L1 6468 6567 0 1 749 583 287 1 28 chr13 21510020 21510272 -98774040 + L1M4 LINE L1 5017 5260 -886 2 749 198 47 0 85 chr13 21510322 21510369 -98773943 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 749 1051 68 7 40 chr13 21510379 21510531 -98773781 - B1_Mm SINE Alu 0 147 1 2 749 594 0 0 0 chr13 21510547 21510613 -98773699 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 749 3148 160 60 42 chr13 21511481 21512094 -98772218 - Lx5 LINE L1 0 7050 6427 2 749 352 280 56 0 chr13 21512750 21512857 -98771455 + PB1 SINE Alu 9 121 -6 2 749 230 189 38 0 chr13 21512866 21512919 -98771393 - RCHARR1 DNA MER1_type -134 840 786 2 749 536 262 18 18 chr13 21512923 21513086 -98771226 + RSINE1 SINE B4 2 164 -1 2 749 30 0 0 0 chr13 21513167 21513197 -98771115 + AT_rich Low_complexity Low_complexity 1 30 0 2 749 282 29 0 0 chr13 21513456 21513491 -98770821 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 749 22 0 0 0 chr13 21513731 21513753 -98770559 + AT_rich Low_complexity Low_complexity 1 22 0 3 749 198 0 0 0 chr13 21515499 21515521 -98768791 + (A)n Simple_repeat Simple_repeat 1 22 0 3 749 516 16 0 0 chr13 21515708 21515769 -98768543 + (TCCC)n Simple_repeat Simple_repeat 3 63 0 3 749 293 309 49 49 chr13 21516209 21516352 -98767960 - RSINE1 SINE B4 -12 153 11 3 749 399 276 86 8 chr13 21516410 21516527 -98767785 - RSINE1 SINE B4 -35 130 5 3 749 333 0 0 0 chr13 21516563 21516600 -98767712 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 749 711 251 30 6 chr13 21516602 21516766 -98767546 - B3A SINE B2 -30 168 1 3 749 598 231 7 40 chr13 21516792 21516941 -98767371 - B1F SINE Alu -5 144 1 3 749 242 116 0 23 chr13 21517460 21517504 -98766808 + (GGA)n Simple_repeat Simple_repeat 3 45 0 3 749 363 23 0 0 chr13 21517706 21517750 -98766562 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 749 482 146 80 26 chr13 21517802 21517915 -98766397 - ORR1B1-int LTR MaLR -1376 133 15 4 749 270 190 104 30 chr13 21517912 21518011 -98766301 - URR1B DNA MER1_type -93 132 1 4 749 1043 127 32 14 chr13 21518015 21518237 -98766075 + ORR1C1 LTR MaLR 58 378 0 4 749 4601 183 106 97 chr13 21518237 21519590 -98764722 + ORR1C1-int LTR MaLR 1 1365 -5 4 749 893 161 66 25 chr13 21519594 21519791 -98764521 + ORR1C1 LTR MaLR 1 205 -173 4 749 37 76 0 0 chr13 21520252 21520331 -98763981 + AT_rich Low_complexity Low_complexity 1 79 0 4 749 966 134 128 9 chr13 21520634 21520860 -98763452 - Lx9 LINE L1 -5 7639 7387 4 749 254 276 0 0 chr13 21520989 21521112 -98763200 + ORR1B1-int LTR MaLR 632 754 -755 4 749 989 65 14 7 chr13 21521011 21521151 -98763161 + B1_Mus2 SINE Alu 7 147 0 4 749 235 0 0 54 chr13 21521154 21521191 -98763121 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 4 749 604 328 69 52 chr13 21521194 21521599 -98762713 - MLT1C LTR MaLR -52 415 4 4 749 189 0 0 0 chr13 21521842 21521863 -98762449 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 749 201 74 0 0 chr13 21521869 21521896 -98762416 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 749 443 274 0 25 chr13 21522174 21522294 -98762018 - PB1D10 SINE Alu 0 117 1 5 749 617 295 0 0 chr13 21523087 21523236 -98761076 + RSINE1 SINE B4 3 151 -14 5 749 468 116 0 0 chr13 21523265 21523334 -98760978 + B2_Mm2 SINE B2 2 70 -125 5 749 1237 124 5 11 chr13 21523354 21523542 -98760770 + B2_Mm1a SINE B2 2 188 -5 5 749 432 0 0 0 chr13 21523704 21523752 -98760560 + (TATAA)n Simple_repeat Simple_repeat 5 52 0 5 749 285 180 0 0 chr13 21523790 21523840 -98760472 - PB1 SINE Alu -11 116 67 5 749 523 276 0 8 chr13 21523850 21523974 -98760338 + ID_B1 SINE B4 91 213 -11 5 749 385 208 13 13 chr13 21523998 21524076 -98760236 + ID SINE ID 6 83 -141 5 749 256 214 35 97 chr13 21524076 21524092 -98760220 + BC1_Mm scRNA scRNA 6 99 -53 5 749 843 227 0 12 chr13 21524092 21524257 -98760055 + RSINE1 SINE B4 2 164 -1 6 749 669 207 74 0 chr13 21524257 21524391 -98759921 + B1_Mur1 SINE Alu 4 148 -1 6 749 256 214 35 97 chr13 21524391 21524409 -98759903 + BC1_Mm scRNA scRNA 100 111 -41 5 749 456 116 0 0 chr13 21524470 21524556 -98759756 + (TC)n Simple_repeat Simple_repeat 2 87 0 6 749 294 29 0 0 chr13 21524556 21524591 -98759721 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 749 235 96 19 19 chr13 21524661 21524714 -98759598 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 6 749 289 191 95 0 chr13 21524725 21524788 -98759524 - AluG_3 SINE Alu -96 215 147 6 749 472 300 59 13 chr13 21524877 21525029 -98759283 - RSINE1 SINE B4 -2 163 5 6 749 438 36 0 0 chr13 21525044 21525100 -98759212 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 749 210 37 0 0 chr13 21525136 21525163 -98759149 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 749 231 306 0 0 chr13 21525892 21525954 -98758358 + L1MC4 LINE L1 7801 7862 -180 6 749 383 234 234 0 chr13 21526730 21526841 -98757471 + B1F SINE Alu 3 139 -10 7 749 279 235 102 93 chr13 21527111 21527219 -98757093 + MLT1G LTR MaLR 236 353 -226 7 749 14315 85 32 7 chr13 21527890 21530622 -98753690 + L1VL2 LINE L1 177 2983 -632 7 749 2916 148 24 11 chr13 21530704 21531250 -98753062 + RMER6A LTR ERVK 204 756 0 7 749 200 35 35 0 chr13 21531573 21531602 -98752710 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 7 749 806 326 178 10 chr13 21531608 21532091 -98752221 + MER21B LTR ERV1 221 784 -79 7 749 279 133 0 0 chr13 21532117 21532162 -98752150 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 749 186 71 0 0 chr13 21533167 21533195 -98751117 + (A)n Simple_repeat Simple_repeat 1 28 0 7 749 256 221 103 0 chr13 21533202 21533270 -98751042 + ID4 SINE ID 9 83 0 7 749 228 208 260 0 chr13 21533457 21533534 -98750778 - RSINE1 SINE B4 -39 126 30 7 749 662 251 76 11 chr13 21533744 21533929 -98750383 - B4A SINE B4 -6 286 90 8 749 1190 61 0 0 chr13 21534824 21534971 -98749341 + B1_Mus2 SINE Alu 1 147 0 8 749 225 0 0 0 chr13 21534971 21534996 -98749316 + (A)n Simple_repeat Simple_repeat 1 25 0 8 749 311 256 122 72 chr13 21535907 21536088 -98748224 - B3A SINE B2 -8 190 1 8 749 482 323 50 39 chr13 21536160 21536418 -98747894 - B4A SINE B4 -30 262 2 8 749 307 289 11 0 chr13 21536425 21536515 -98747797 - Tigger10 DNA Tigger -1046 797 707 8 749 245 236 40 40 chr13 21536554 21536629 -98747683 - MER103 DNA DNA -54 112 38 8 749 357 267 22 22 chr13 21536865 21537003 -98747309 - MMSAT4 Satellite Satellite 0 168 31 8 749 310 236 52 52 chr13 21537223 21537339 -98746973 - MMSAT4 Satellite Satellite -22 146 31 8 749 628 266 69 0 chr13 21537810 21537998 -98746314 - B3 SINE B2 -14 202 2 8 749 21 0 0 0 chr13 21538036 21538057 -98746255 + AT_rich Low_complexity Low_complexity 1 21 0 9 749 244 227 19 85 chr13 21539017 21539040 -98745272 + ID_B1 SINE B4 126 224 0 9 749 342 185 24 24 chr13 21539040 21539123 -98745189 + B1_Mur1 SINE Alu 67 149 0 9 749 360 0 0 0 chr13 21539162 21539202 -98745110 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 749 204 55 0 53 chr13 21539459 21539497 -98744815 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 9 749 582 214 97 22 chr13 21540565 21540699 -98743613 - B1_Mur1 SINE Alu -5 144 1 9 749 772 289 79 55 chr13 21542319 21542722 -98741590 + MLT2B4 LTR ERVL 83 495 -61 9 749 516 298 15 20 chr13 21542956 21543151 -98741161 + B3A SINE B2 1 194 -4 9 749 790 185 149 6 chr13 21543378 21543552 -98740760 - B3 SINE B2 -14 202 4 9 749 984 137 181 16 chr13 21543653 21543846 -98740466 + URR1B DNA MER1_type 1 225 0 9 749 691 189 8 0 chr13 21544322 21544444 -98739868 - B1_Mus1 SINE Alu -15 133 11 1 749 339 330 0 0 chr13 21544905 21545002 -98739310 + L2a LINE L2 2965 3061 -365 1 749 204 188 0 0 chr13 21546072 21546104 -98738208 + (CTG)n Simple_repeat Simple_repeat 1 32 0 1 749 419 243 90 33 chr13 21546939 21547084 -98737228 + B3A SINE B2 5 152 -64 1 749 210 71 0 0 chr13 21547098 21547126 -98737186 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 749 405 244 12 0 chr13 21548024 21548110 -98736202 - RSINE1 SINE B4 -2 163 77 1 749 1161 221 11 62 chr13 21548144 21548419 -98735893 + RMER20B LTR ERVK 10 270 -357 1 749 920 194 11 109 chr13 21548422 21548921 -98735391 + RMER17C LTR ERVK 85 438 -520 1 749 1274 184 68 78 chr13 21548937 21549244 -98735068 + RMER20B LTR ERVK 300 603 -24 1 749 501 17 0 0 chr13 21549370 21549428 -98734884 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 749 300 53 0 0 chr13 21549428 21549465 -98734847 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 749 418 288 291 5 chr13 21549470 21549683 -98734629 - B4 SINE B4 -18 274 1 1 749 1644 131 11 25 chr13 21549861 21550142 -98734170 + L1_Mus3 LINE L1 6362 6638 0 1 749 4526 201 189 2 chr13 21550248 21550277 -98734035 - L1Md_F LINE L1 -3150 2730 2703 1 749 5012 70 11 40 chr13 21550277 21550973 -98733339 - L1_Mus2 LINE L1 0 6566 5891 1 749 5483 133 64 33 chr13 21550973 21552802 -98731510 - L1Md_F LINE L1 -3178 2702 675 1 749 364 270 11 11 chr13 21553306 21553396 -98730916 + RSINE1 SINE B4 4 93 -72 1 749 678 278 31 0 chr13 21553611 21553805 -98730507 - B3 SINE B2 -13 203 4 1 749 756 53 17 17 chr13 21553819 21553934 -98730378 + (GAAA)n Simple_repeat Simple_repeat 3 117 0 1 749 755 197 0 7 chr13 21553937 21554075 -98730237 + B1_Mus1 SINE Alu 6 142 -6 1 749 1911 117 15 57 chr13 21554326 21554662 -98729650 - RLTRETN_Mm LTR ERVK 0 322 1 1 749 328 203 0 86 chr13 21554729 21554810 -98729502 + B1F SINE Alu 63 136 -13 1 749 1981 136 3 60 chr13 21555136 21555217 -98729095 - ORR1A1 LTR MaLR 0 346 270 1 749 3385 97 15 2 chr13 21555217 21555683 -98728629 + MT2C_Mm LTR ERVL 1 472 -3 1 749 1981 136 3 60 chr13 21555683 21555968 -98728344 - ORR1A1 LTR MaLR -77 269 1 1 749 756 156 7 28 chr13 21560657 21560802 -98723510 - B1_Mur4 SINE Alu 0 150 9 1 749 915 52 42 49 chr13 21560821 21560986 -98723326 - L1_Mus1 LINE L1 0 6567 6427 1 749 1065 83 21 0 chr13 21562044 21562188 -98722124 - B1_Mus1 SINE Alu -1 147 1 1 749 724 244 12 31 chr13 21562359 21562565 -98721747 - B3A SINE B2 0 195 2 1 749 378 0 0 0 chr13 21562577 21562619 -98721693 + (TTG)n Simple_repeat Simple_repeat 1 42 0 1 749 537 278 16 0 chr13 21562627 21562753 -98721559 - ID_B1 SINE B4 -17 207 80 1 749 771 262 34 10 chr13 21562846 21563050 -98721262 + B3 SINE B2 1 209 -7 1 749 881 231 245 0 chr13 21563083 21563373 -98720939 + MLT1A0 LTR MaLR 4 364 -1 1 749 329 274 47 0 chr13 21563989 21564095 -98720217 - ID_B1 SINE B4 -1 223 113 1 749 670 300 84 87 chr13 21564217 21564516 -98719796 + RLTR16 LTR ERVK 1 298 -207 1 749 588 251 55 65 chr13 21564925 21565125 -98719187 - B3A SINE B2 0 198 1 1 749 273 57 0 0 chr13 21565307 21565342 -98718970 + (CGTG)n Simple_repeat Simple_repeat 1 35 0 1 749 893 292 12 8 chr13 21565425 21565667 -98718645 - MTD LTR MaLR -123 296 54 1 749 234 313 119 0 chr13 21565715 21565849 -98718463 - L1MC4 LINE L1 -1432 6610 6461 1 749 255 61 0 0 chr13 21565941 21565974 -98718338 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 749 4200 189 32 41 chr13 21566046 21566173 -98718139 - RMER13B LTR ERVK 0 908 779 1 749 1987 141 108 58 chr13 21566173 21566625 -98717687 + IAPLTR2_Mm LTR ERVK 1 475 0 1 749 4200 189 32 41 chr13 21566625 21567420 -98716892 - RMER13B LTR ERVK -130 778 1 1 749 459 245 0 0 chr13 21567438 21567532 -98716780 + B4 SINE B4 107 200 -92 1 749 1105 230 43 43 chr13 21567644 21567967 -98716345 + MTEa LTR MaLR 56 378 -1 1 749 335 288 102 75 chr13 21567975 21568230 -98716082 - ORR1E LTR MaLR 0 359 98 1 749 350 290 93 42 chr13 21568532 21568748 -98715564 - L1MC5 LINE L1 -29 7932 7706 1 749 297 231 15 0 chr13 21568765 21568830 -98715482 + B3A SINE B2 1 66 -132 1 749 234 0 0 0 chr13 21568832 21568858 -98715454 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 1 749 1461 211 118 6 chr13 21568860 21569217 -98715095 + MTD LTR MaLR 23 419 0 1 749 479 224 28 0 chr13 21569232 21569339 -98714973 + B3A SINE B2 89 198 0 1 749 238 297 44 75 chr13 21569443 21569603 -98714709 - RLTR14 LTR ERV1 0 382 228 1 749 504 0 0 0 chr13 21571770 21571826 -98712486 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 749 204 40 0 0 chr13 21571974 21571999 -98712313 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 749 1164 273 27 12 chr13 21572155 21572485 -98711827 - Lx8 LINE L1 -339 7134 6800 1 749 246 346 79 14 chr13 21572869 21573083 -98711229 + MIR SINE MIR 15 242 -20 1 749 522 0 0 0 chr13 21573384 21573442 -98710870 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 749 274 300 0 0 chr13 21573834 21573904 -98710408 - ID4 SINE ID -1 82 13 1 749 267 275 14 0 chr13 21574326 21574395 -98709917 - PB1D10 SINE Alu -47 70 1 1 749 219 288 35 59 chr13 21574332 21574417 -98709895 - B4A SINE B4 -144 148 66 1 749 380 299 20 20 chr13 21575924 21576194 -98708118 + MMSAT4 Satellite Satellite 1 270 -5 1 749 274 275 29 29 chr13 21576417 21576522 -98707790 + MMSAT4 Satellite Satellite 59 163 -5 1 749 1808 199 33 47 chr13 21577377 21577800 -98706512 - MTD LTR MaLR -2 417 1 1 749 432 226 38 0 chr13 21577841 21577947 -98706365 - MTEb LTR MaLR -2 377 268 1 749 349 177 99 104 chr13 21577947 21578167 -98706145 - RLTR25B LTR ERVK 0 1028 827 1 749 3369 164 49 63 chr13 21578233 21578308 -98706004 - RLTR25A LTR ERVK -206 897 821 1 749 3422 43 0 0 chr13 21578308 21578704 -98705608 - MTA_Mm LTR MaLR 0 396 1 1 749 3369 164 49 63 chr13 21578704 21578847 -98705465 - RLTR25A LTR ERVK -283 820 681 1 749 351 0 0 0 chr13 21578847 21578886 -98705426 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 749 3369 164 49 63 chr13 21578886 21579458 -98704854 - RLTR25A LTR ERVK -423 680 117 1 749 258 221 26 13 chr13 21579458 21579536 -98704776 - RLTR25B LTR ERVK -853 175 97 1 749 1817 131 52 37 chr13 21579513 21579861 -98704451 + RMER2 LTR ERV1 215 567 0 1 749 2937 59 148 108 chr13 21580273 21580765 -98703547 + RLTR1B LTR ERV1 1 512 0 1 749 27 29 0 0 chr13 21581206 21581240 -98703072 + AT_rich Low_complexity Low_complexity 1 34 0 1 749 207 160 0 39 chr13 21581397 21581449 -98702863 + T-rich Low_complexity Low_complexity 3 52 0 1 749 328 293 168 16 chr13 21581740 21581865 -98702447 - ID_B1 SINE B4 -6 218 75 1 749 1106 105 79 0 chr13 21581978 21582168 -98702144 - RMER2 LTR ERV1 -148 419 215 1 749 419 153 14 207 chr13 21582145 21582285 -98702027 + RLTR25B LTR ERVK 97 209 -819 1 749 679 152 145 48 chr13 21582639 21582805 -98701507 + URR1A DNA MER1_type 45 226 0 1 749 249 295 69 64 chr13 21582805 21582845 -98701467 - CYRA11_Mm Unknown Y-chromosome -446 171 131 1 749 1903 166 80 0 chr13 21583257 21583631 -98700681 + MTD LTR MaLR 1 404 -15 1 749 334 319 78 0 chr13 21584002 21584118 -98700194 + PB1 SINE Alu 3 127 0 1 749 377 275 0 27 chr13 21584210 21584322 -98699990 - B1F SINE Alu 0 149 41 1 749 700 49 0 0 chr13 21584713 21584795 -98699517 - tRNA-Ser-AGY tRNA tRNA -3 82 1 1 749 2375 85 50 9 chr13 21585491 21585834 -98698478 + IAPEY2_LTR LTR ERVK 1 357 0 1 749 484 266 18 0 chr13 21586042 21586155 -98698157 + PB1D7 SINE Alu 1 115 -5 1 749 328 313 0 0 chr13 21586665 21586748 -98697564 + ID4_ SINE ID 1 83 0 1 749 334 189 96 78 chr13 21586841 21586956 -98697356 + PB1D9 SINE Alu 1 117 -3 1 749 23 0 0 0 chr13 21588611 21588634 -98695678 + AT_rich Low_complexity Low_complexity 1 23 0 1 749 427 221 147 0 chr13 21588640 21588735 -98695577 - PB1D10 SINE Alu -6 111 3 1 749 222 37 0 0 chr13 21589436 21589463 -98694849 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 749 4039 55 18 8 chr13 21589560 21590058 -98694254 - RLTR1C LTR ERV1 0 503 1 1 749 233 215 210 25 chr13 21591113 21591194 -98693118 - PB1D10 SINE Alu -21 128 33 1 749 288 167 19 0 chr13 21591354 21591408 -98692904 + MTC LTR MaLR 1 55 -366 1 749 542 150 10 0 chr13 21591408 21591508 -98692804 + MTB_Mm LTR MaLR 1 101 -306 1 749 285 51 0 0 chr13 21591508 21591547 -98692765 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 1 749 405 179 18 36 chr13 21591556 21591724 -98692588 + (TA)n Simple_repeat Simple_repeat 1 165 0 1 749 262 299 77 7 chr13 21591827 21591982 -98692330 + L1M5 LINE L1 5120 5285 -861 1 749 707 289 37 8 chr13 21592236 21592447 -98691865 - B3A SINE B2 -4 212 2 1 749 249 33 0 0 chr13 21592789 21592819 -98691493 + (T)n Simple_repeat Simple_repeat 1 30 0 1 749 758 184 28 14 chr13 21593337 21593480 -98690832 + B1_Mur1 SINE Alu 5 149 0 1 749 202 242 87 101 chr13 21593543 21593612 -98690700 + L2c LINE L2 3282 3349 -38 1 749 225 214 214 0 chr13 21594136 21594192 -98690120 + ID4 SINE ID 4 71 -12 1 749 654 13 0 0 chr13 21594202 21594277 -98690035 + (CAAAC)n Simple_repeat Simple_repeat 2 76 0 1 749 702 259 68 17 chr13 21594593 21594770 -98689542 - B3A SINE B2 -10 188 3 1 749 700 232 36 0 chr13 21595510 21595648 -98688664 - RSINE1 SINE B4 -2 163 21 1 749 293 308 36 27 chr13 21596312 21596610 -98687702 - MMSAT4 Satellite Satellite -5 300 1 1 749 240 246 0 15 chr13 21596798 21596864 -98687448 - MurSatRep1 Unknown Unknown -336 1801 1737 2 749 256 220 65 65 chr13 21596808 21596915 -98687397 - MMSAT4 Satellite Satellite 0 168 62 2 749 257 324 0 0 chr13 21597390 21597461 -98686851 + ID4 SINE ID 2 72 -11 2 749 234 266 94 0 chr13 21598723 21598787 -98685525 + ID2 SINE ID 3 72 -11 2 749 285 335 69 15 chr13 21599003 21599206 -98685106 + L1M5 LINE L1 4867 5080 -1066 2 749 486 0 0 0 chr13 21599401 21599455 -98684857 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 749 1724 187 69 8 chr13 21599753 21600130 -98684182 + MTD LTR MaLR 13 412 -7 2 749 802 262 204 0 chr13 21600131 21600406 -98683906 - ORR1D2 LTR MaLR -39 331 1 2 749 274 290 30 0 chr13 21600607 21600707 -98683605 - MIRb SINE MIR -73 195 93 2 749 497 198 71 9 chr13 21600802 21600914 -98683398 - PB1D9 SINE Alu 0 120 2 2 749 32 0 0 0 chr13 21601195 21601227 -98683085 + AT_rich Low_complexity Low_complexity 1 32 0 2 749 409 266 168 5 chr13 21603096 21603281 -98681031 + L1MA5A LINE L1 6082 6296 -1 2 749 602 150 240 7 chr13 21603384 21603538 -98680774 - URR1A DNA MER1_type 0 226 37 2 749 392 245 10 30 chr13 21603589 21603690 -98680622 - MER20 DNA MER1_type -78 141 43 2 749 2182 244 60 106 chr13 21603857 21604759 -98679553 + RMER13A LTR ERVK 1 860 0 2 749 227 333 36 0 chr13 21604764 21604848 -98679464 - PB1D10 SINE Alu -30 87 1 2 749 462 219 8 42 chr13 21605092 21605211 -98679101 - L2a LINE L2 -8 3418 3304 2 749 1278 205 188 91 chr13 21606251 21606734 -98677578 - MT2A LTR ERVL 0 533 4 2 749 424 71 0 0 chr13 21606737 21606793 -98677519 - MERVL_2A-int LTR ERVL 0 5761 5706 2 749 331 164 0 40 chr13 21606793 21606869 -98677443 - ORR1A3-int LTR MaLR -1324 639 567 2 749 1811 139 56 6 chr13 21606877 21607196 -98677116 - MERVL_2A-int LTR ERVL -71 5690 5356 2 749 3993 171 70 9 chr13 21607185 21607204 -98677108 - MERVL_2A-int LTR ERVL -4947 814 789 2 749 267 54 0 0 chr13 21607204 21607241 -98677071 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 2 749 3993 171 70 9 chr13 21607241 21607988 -98676324 - MERVL_2A-int LTR ERVL -4973 788 2 2 749 543 181 131 7 chr13 21607988 21608133 -98676179 - MT2A LTR ERVL 0 533 371 2 749 204 311 107 0 chr13 21608751 21608854 -98675458 + MIR SINE MIR 3 116 -146 2 749 507 270 93 44 chr13 21609402 21609584 -98674728 - B3A SINE B2 -7 191 1 2 749 356 291 9 26 chr13 21609593 21609706 -98674606 - PB1D9 SINE Alu 0 120 10 2 749 247 186 51 0 chr13 21610657 21610716 -98673596 - MARNA DNA Mariner -508 78 17 2 749 364 281 30 30 chr13 21611953 21612421 -98671891 - MMSAT4 Satellite Satellite -6 468 1 2 749 249 288 43 43 chr13 21612535 21612673 -98671639 - MMSAT4 Satellite Satellite 0 168 31 2 749 718 241 48 0 chr13 21613374 21613540 -98670772 - B3A SINE B2 -15 183 10 2 749 477 297 43 0 chr13 21614785 21614923 -98669389 + B1F2 SINE Alu 6 149 0 2 749 672 286 83 38 chr13 21615297 21615517 -98668795 + B4A SINE B4 2 232 -60 2 749 459 286 79 33 chr13 21615517 21615669 -98668643 + RSINE1 SINE B4 2 160 -5 2 749 461 277 222 31 chr13 21615890 21616342 -98667970 + L1MC4 LINE L1 7208 7745 -297 2 749 234 0 0 0 chr13 21616496 21616522 -98667790 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2 749 240 311 0 0 chr13 21616571 21616645 -98667667 + Lx8 LINE L1 7045 7118 -355 2 749 245 335 120 71 chr13 21616715 21616898 -98667414 + RMER15 LTR ERVL 371 562 -13 2 749 339 224 199 34 chr13 21619524 21619700 -98664612 - L1MC LINE L1 -2045 5740 5536 2 749 337 379 10 0 chr13 21619834 21619937 -98664375 - PB1D10 SINE Alu -1 116 13 2 749 339 296 48 13 chr13 21619963 21620072 -98664240 - PB1D10 SINE Alu -33 116 2 2 749 544 239 136 24 chr13 21620081 21620411 -98663901 - L1M4 LINE L1 -824 5322 4956 2 749 264 233 158 30 chr13 21620596 21620760 -98663552 - L1M4 LINE L1 -1422 4724 4540 2 749 399 229 56 28 chr13 21621230 21621338 -98662974 + MLT1C LTR MaLR 66 176 -291 2 749 598 240 13 20 chr13 21621341 21621494 -98662818 + RSINE1 SINE B4 1 152 -13 2 749 207 114 0 0 chr13 21622482 21622517 -98661795 + (A)n Simple_repeat Simple_repeat 1 35 0 2 749 445 256 58 25 chr13 21623717 21623837 -98660475 - B1F SINE Alu -13 136 13 2 749 2210 164 58 10 chr13 21624331 21624724 -98659588 + MTC LTR MaLR 1 412 -9 2 749 1202 156 43 39 chr13 21624727 21624981 -98659331 + MTC-int LTR MaLR 2 256 -1002 2 749 776 203 0 19 chr13 21624998 21625159 -98659153 - RCHARR1 DNA MER1_type -298 676 519 2 749 538 275 43 19 chr13 21625154 21625327 -98658985 - ID_B1 SINE B4 -1 223 52 2 749 1529 268 33 14 chr13 21625313 21625740 -98658572 - RCHARR1 DNA MER1_type -457 517 83 2 749 232 345 0 18 chr13 21625803 21625915 -98658397 - PB1D10 SINE Alu -7 110 1 2 750 684 186 93 0 chr13 21627406 21627535 -98656777 + B1_Mur1 SINE Alu 1 141 -8 2 750 520 266 48 0 chr13 21627659 21627783 -98656529 - B1F SINE Alu -9 140 11 2 750 441 188 23 23 chr13 21627786 21627873 -98656439 - B1F2 SINE Alu -56 93 7 2 750 249 284 10 59 chr13 21627873 21627887 -98656425 - ID_B1 SINE B4 -53 171 76 2 750 568 246 0 8 chr13 21628495 21628614 -98655698 - PB1D9 SINE Alu -1 119 2 2 750 594 207 115 20 chr13 21630905 21631053 -98653259 - RMER10B LTR ERVL -236 162 1 2 750 399 257 51 7 chr13 21631613 21631750 -98652562 - L1MA4A LINE L1 -376 5924 5782 2 750 180 77 0 0 chr13 21631751 21631777 -98652535 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 2 750 616 81 30 0 chr13 21634037 21634136 -98650176 + (TTCC)n Simple_repeat Simple_repeat 3 104 0 2 750 312 225 167 14 chr13 21634174 21634246 -98650066 - ID4_ SINE ID 0 83 1 2 750 1224 48 0 0 chr13 21635270 21635417 -98648895 - B1_Mm SINE Alu 0 147 1 2 750 345 369 41 10 chr13 21635477 21635674 -98648638 - MLT1H LTR MaLR 0 549 347 2 750 269 232 11 0 chr13 21635731 21635826 -98648486 + GA-rich Low_complexity Low_complexity 1 96 0 2 750 1028 138 75 0 chr13 21635994 21636168 -98648144 - B2_Mm2 SINE B2 -7 188 2 2 750 567 315 163 0 chr13 21636177 21636361 -98647951 - ID_B1 SINE B4 -6 218 5 2 750 641 279 58 70 chr13 21636363 21636686 -98647626 + L1MCa LINE L1 1887 2221 -4287 2 750 949 169 27 21 chr13 21636686 21636874 -98647438 + Lx5 LINE L1 6856 7044 -6 2 750 641 279 58 70 chr13 21636874 21637105 -98647207 + L1MCa LINE L1 2222 2434 -4074 2 750 605 314 31 0 chr13 21637132 21637355 -98646957 + L1MCa LINE L1 2508 2737 -3584 2 750 437 343 115 68 chr13 21637371 21637862 -98646450 - MLT2B3 LTR ERVL 0 515 6 2 750 676 296 15 15 chr13 21637876 21638137 -98646175 + L1MCa LINE L1 2750 3010 -3311 2 750 312 220 253 0 chr13 21638169 21638260 -98646052 - B3A SINE B2 -83 115 2 2 750 663 215 118 24 chr13 21638266 21638494 -98645818 + L1MCa LINE L1 3047 3308 -3013 2 750 342 0 0 0 chr13 21638494 21638532 -98645780 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 750 663 215 118 24 chr13 21638532 21638599 -98645713 + L1MCa LINE L1 3309 3370 -2951 2 750 289 386 74 62 chr13 21638700 21638957 -98645355 + MLT1C LTR MaLR 57 316 -151 2 750 278 303 0 21 chr13 21639085 21639166 -98645146 + B1F SINE Alu 8 83 -37 2 750 1184 55 7 0 chr13 21639885 21640031 -98644281 + B1_Mm SINE Alu 1 147 0 2 750 6398 63 42 1 chr13 21640040 21640888 -98643424 + Lx3_Mus LINE L1 6126 7008 -1 2 750 25 0 0 0 chr13 21641260 21641285 -98643027 + AT_rich Low_complexity Low_complexity 1 25 0 2 750 815 223 53 48 chr13 21641285 21641492 -98642820 - B3 SINE B2 -7 209 2 2 750 529 289 0 0 chr13 21641495 21641637 -98642675 - Lx7 LINE L1 -784 6912 6771 2 750 2474 82 20 0 chr13 21641640 21641993 -98642319 - Lx3_Mus LINE L1 -192 6817 6458 2 750 1240 85 19 34 chr13 21641993 21642199 -98642113 + Lx3_Mus LINE L1 6807 7009 0 2 750 1439 326 48 12 chr13 21642303 21642872 -98641440 - Lx8 LINE L1 -678 6795 6207 2 750 184 175 35 17 chr13 21643286 21643344 -98640968 + CT-rich Low_complexity Low_complexity 3 61 0 2 750 393 336 122 8 chr13 21643576 21643831 -98640481 - L1MEg2 LINE L1 -5944 508 225 2 750 2214 289 123 72 chr13 21643858 21643995 -98640317 + Tigger7 DNA MER2_type 64 198 -2293 2 750 2450 129 18 10 chr13 21643995 21644385 -98639927 - ORR1B1 LTR MaLR 0 394 2 2 750 2214 289 123 72 chr13 21644385 21645201 -98639111 + Tigger7 DNA MER2_type 199 1045 -1446 2 750 711 207 7 7 chr13 21645201 21645342 -98638970 + B1_Mur1 SINE Alu 2 142 -7 2 750 2214 289 123 72 chr13 21645342 21645600 -98638712 + Tigger7 DNA MER2_type 1046 1338 -1153 2 750 1064 59 0 0 chr13 21646278 21646413 -98637899 - B1_Mm SINE Alu 0 147 13 2 750 345 294 26 35 chr13 21646428 21646541 -98637771 - B1F1 SINE Alu -21 128 17 2 750 231 211 0 19 chr13 21646730 21646783 -98637529 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 2 750 28 48 0 0 chr13 21648714 21648756 -98635556 + AT_rich Low_complexity Low_complexity 1 42 0 2 750 21 71 0 0 chr13 21649635 21649677 -98634635 + AT_rich Low_complexity Low_complexity 1 42 0 2 750 692 291 9 28 chr13 21650304 21650516 -98633796 - MLT1C LTR MaLR -56 411 204 2 750 387 86 0 0 chr13 21650531 21650589 -98633723 - L1_Mus4 LINE L1 -99 6537 6480 2 750 291 102 0 33 chr13 21650580 21650641 -98633671 + Lx LINE L1 6594 6652 -2 2 750 399 224 0 0 chr13 21650642 21650709 -98633603 - B1_Mur3 SINE Alu -13 136 70 2 750 400 296 41 4 chr13 21652502 21652620 -98631692 - B1F SINE Alu 0 120 1 2 750 290 274 10 10 chr13 21652838 21652934 -98631378 - PB1D10 SINE Alu 0 117 22 2 750 243 358 28 28 chr13 21653470 21653611 -98630701 - ID_B1 SINE B4 0 224 84 2 750 321 330 26 18 chr13 21653498 21653612 -98630700 - PB1D10 SINE Alu -1 116 2 2 750 443 308 47 55 chr13 21653619 21653873 -98630439 + L1MA6 LINE L1 5800 6051 -249 2 750 8428 102 51 32 chr13 21653876 21655500 -98628812 + Lx4A LINE L1 5395 7049 -9 2 750 504 0 0 0 chr13 21655621 21655677 -98628635 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 750 710 269 13 0 chr13 21655678 21655827 -98628485 - RSINE1 SINE B4 -12 153 3 2 750 687 271 0 19 chr13 21655938 21656096 -98628216 - RSINE1 SINE B4 -8 157 3 2 750 304 239 0 15 chr13 21656533 21656601 -98627711 - ID4 SINE ID -14 69 3 2 750 30462 94 13 2 chr13 21656961 21662870 -98621442 + L1_Mus1 LINE L1 580 6559 -8 2 750 477 0 0 0 chr13 21662870 21662923 -98621389 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 750 270 0 0 0 chr13 21662975 21663005 -98621307 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 750 255 237 77 26 chr13 21663224 21663302 -98621010 - B1F1 SINE Alu -7 142 61 3 750 226 281 31 0 chr13 21663657 21663721 -98620591 + ID4_ SINE ID 5 70 -13 3 750 216 282 19 0 chr13 21663725 21663881 -98620431 + (CA)n Simple_repeat Simple_repeat 2 160 0 3 750 3944 85 6 2 chr13 21666464 21666996 -98617316 - L1_Mus3 LINE L1 0 6638 6105 3 750 387 130 0 0 chr13 21667009 21667086 -98617226 + (T)n Simple_repeat Simple_repeat 1 77 0 3 750 351 247 195 65 chr13 21667273 21667291 -98617021 - B2_Mm2 SINE B2 -4 191 174 3 750 198 0 0 0 chr13 21667291 21667313 -98616999 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 750 450 0 0 0 chr13 21667313 21667362 -98616950 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 750 523 247 195 65 chr13 21667362 21667511 -98616801 - B3 SINE B2 -38 178 1 3 750 524 217 160 15 chr13 21668231 21668362 -98615950 - B1_Mur4 SINE Alu 0 150 1 3 750 287 333 59 17 chr13 21669027 21669146 -98615166 - L2a LINE L2 -8 3418 3295 3 750 180 0 0 0 chr13 21669621 21669641 -98614671 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 750 264 258 16 0 chr13 21669722 21669784 -98614528 - ID4_ SINE ID -19 64 2 3 750 248 28 0 53 chr13 21669919 21669957 -98614355 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 3 750 243 0 0 0 chr13 21669957 21669984 -98614328 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 3 750 1009 69 39 0 chr13 21669985 21670115 -98614197 - B1_Mus1 SINE Alu -13 135 1 3 750 471 78 0 0 chr13 21672201 21672265 -98612047 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 750 503 274 60 0 chr13 21672281 21672398 -98611914 - B3A SINE B2 -73 125 2 3 750 574 252 7 14 chr13 21672404 21672545 -98611767 - B1F SINE Alu -7 142 3 3 750 260 179 207 49 chr13 21672679 21672700 -98611612 - B1_Mur2 SINE Alu -1 148 126 3 750 333 0 0 0 chr13 21672700 21672737 -98611575 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 750 260 179 207 49 chr13 21672737 21672797 -98611515 - B1_Mur2 SINE Alu -24 125 54 3 750 266 267 9 19 chr13 21674446 21674553 -98609759 - L1MC3 LINE L1 -132 7653 7548 3 750 1244 80 0 4 chr13 21674566 21674791 -98609521 + (GA)n Simple_repeat Simple_repeat 1 224 0 3 750 692 233 64 59 chr13 21675049 21675236 -98609076 - B3 SINE B2 -1 215 28 3 750 216 0 0 0 chr13 21675240 21675264 -98609048 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 750 993 93 0 0 chr13 21675418 21675558 -98608754 - L1_Mus2 LINE L1 0 6566 6427 3 750 567 293 7 20 chr13 21676970 21677123 -98607189 - ID_B1 SINE B4 -7 217 67 3 750 351 0 0 0 chr13 21677185 21677224 -98607088 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 750 559 262 328 22 chr13 21677321 21677584 -98606728 - ORR1D1 LTR MaLR 0 374 21 3 750 272 222 85 12 chr13 21677803 21677885 -98606427 + ORR1E LTR MaLR 272 359 0 3 750 271 0 51 0 chr13 21677887 21677926 -98606386 + (TTTTTA)n Simple_repeat Simple_repeat 5 45 0 3 750 424 250 16 41 chr13 21678040 21678072 -98606240 - MER57-int LTR ERV1 -278 7259 7228 3 750 195 42 0 0 chr13 21678072 21678096 -98606216 + (TTA)n Simple_repeat Simple_repeat 1 24 0 3 750 424 250 16 41 chr13 21678096 21678184 -98606128 - MER57-int LTR ERV1 -310 7227 7143 3 750 233 346 13 0 chr13 21678193 21678271 -98606041 - MER76 LTR ERVL -612 79 1 3 750 865 234 17 6 chr13 21678488 21678664 -98605648 + B3 SINE B2 35 212 -4 3 750 236 354 0 0 chr13 21679266 21679331 -98604981 - MLT1A0 LTR MaLR -207 158 94 3 750 1087 246 74 84 chr13 21679350 21679803 -98604509 + MT2A LTR ERVL 3 575 -26 3 750 235 67 0 0 chr13 21680322 21680352 -98603960 + MLT2D LTR ERVL 531 560 0 3 750 320 221 24 72 chr13 21680352 21680433 -98603879 - MLT1A0 LTR MaLR -288 77 1 3 750 21 0 0 0 chr13 21680497 21680518 -98603794 + AT_rich Low_complexity Low_complexity 1 21 0 3 750 280 242 99 53 chr13 21680717 21680848 -98603464 + MLT1A0 LTR MaLR 208 344 -21 3 750 1642 169 35 32 chr13 21681132 21681443 -98602869 + ORR1A4 LTR MaLR 18 329 0 3 750 206 319 136 12 chr13 21681548 21681710 -98602602 + MIR SINE MIR 54 235 -27 3 750 2407 222 44 6 chr13 21682104 21682599 -98601713 + Lx5 LINE L1 6477 6990 -60 3 750 492 143 0 0 chr13 21682638 21682722 -98601590 + (GGA)n Simple_repeat Simple_repeat 2 85 0 3 750 528 16 0 0 chr13 21682891 21682952 -98601360 + (CAATC)n Simple_repeat Simple_repeat 2 62 0 3 750 3736 227 29 57 chr13 21683204 21684429 -98599883 + RMER1A Other Other 1 1027 -3 3 750 424 301 36 22 chr13 21684813 21684952 -98599360 + ID_B1 SINE B4 83 223 -1 3 750 207 0 0 0 chr13 21685057 21685080 -98599232 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 750 237 301 97 9 chr13 21685088 21685202 -98599110 + MER110 LTR ERV1 8 131 -360 3 750 327 343 58 0 chr13 21685242 21685379 -98598933 + MER110 LTR ERV1 226 370 -121 3 750 1476 252 90 17 chr13 21685379 21686022 -98598290 + L1_Mur3 LINE L1 133 1232 -6496 3 750 8002 154 80 74 chr13 21686000 21688021 -98596291 + L1_Mur3 LINE L1 1154 3188 -2692 3 750 5606 149 42 5 chr13 21689001 21689274 -98595038 + L1_Mur3 LINE L1 3182 3471 -2409 3 750 216 0 0 0 chr13 21689274 21689298 -98595014 + (CAA)n Simple_repeat Simple_repeat 3 26 0 3 750 5606 149 42 5 chr13 21689298 21690061 -98594251 + L1_Mur3 LINE L1 3472 4256 -1624 3 750 30 59 0 0 chr13 21690064 21690115 -98594197 + AT_rich Low_complexity Low_complexity 1 51 0 3 750 186 103 0 0 chr13 21690151 21690180 -98594132 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 750 224 100 0 24 chr13 21690195 21690236 -98594076 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 750 3684 136 52 11 chr13 21690241 21690860 -98593452 - Lx LINE L1 -5 6649 6006 3 750 762 276 123 41 chr13 21690870 21691300 -98593012 - RMER5 LTR ERV1 -26 508 1 3 750 1634 164 3 17 chr13 21691305 21691598 -98592714 - L1_Mm LINE L1 -673 5210 4922 3 750 3264 118 71 17 chr13 21691598 21692135 -98592177 + Lx LINE L1 6073 6638 -16 3 750 285 29 0 0 chr13 21692139 21692173 -98592139 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 750 29373 98 11 10 chr13 21692214 21695572 -98588740 - L1Md_F2 LINE L1 0 6582 3241 3 750 1876 56 47 16 chr13 21695572 21695828 -98588484 - L1_Mus2 LINE L1 -1 6565 6302 3 750 29373 112 12 12 chr13 21695828 21698054 -98586258 - L1Md_F2 LINE L1 -2643 3240 997 3 750 703 246 18 12 chr13 21698088 21698275 -98586037 - L1_Mur3 LINE L1 -3750 2390 2179 3 750 3212 161 15 20 chr13 21698275 21698821 -98585491 + RLTR25A LTR ERVK 3 545 -558 3 750 819 171 109 65 chr13 21698815 21699019 -98585293 + RLTR25A LTR ERVK 758 1028 0 3 750 1270 257 23 25 chr13 21699031 21699462 -98584850 - L1_Mur3 LINE L1 -3716 2164 1735 3 750 4968 247 78 57 chr13 21699447 21699923 -98584389 + Lx7 LINE L1 5650 6121 -1575 3 750 876 68 30 8 chr13 21699923 21700057 -98584255 + L1Md_F2 LINE L1 6434 6570 -12 3 750 4968 247 78 57 chr13 21700057 21701219 -98583093 + Lx7 LINE L1 6122 7321 -375 3 750 246 62 0 0 chr13 21701221 21701253 -98583059 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 750 23 33 0 0 chr13 21701447 21701477 -98582835 + AT_rich Low_complexity Low_complexity 1 30 0 3 750 326 260 0 13 chr13 21701896 21701974 -98582338 - ID4 SINE ID -5 78 2 3 750 454 261 103 31 chr13 21702060 21702254 -98582058 + LTR37A LTR ERV1 175 382 -44 3 750 1155 30 0 0 chr13 21702429 21702563 -98581749 + B1_Mm SINE Alu 2 135 -12 3 750 642 26 0 0 chr13 21702564 21702640 -98581672 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 750 590 270 16 0 chr13 21702653 21702779 -98581533 + ID_B1 SINE B4 87 214 -10 3 750 272 282 56 120 chr13 21704068 21704088 -98580224 + YREP_Mm Unknown Unknown 162 198 -1614 3 750 583 277 15 0 chr13 21704088 21704225 -98580087 - ID_B1 SINE B4 0 224 86 3 750 272 282 56 120 chr13 21704225 21704334 -98579978 + YREP_Mm Unknown Unknown 199 410 -1402 3 750 215 0 67 0 chr13 21706398 21706428 -98577884 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 3 750 5553 109 47 18 chr13 21706429 21707304 -98577008 - Lx3_Mus LINE L1 -24 6985 6086 3 750 624 298 0 6 chr13 21707349 21707508 -98576804 - B3A SINE B2 -36 162 5 3 750 477 0 0 0 chr13 21707795 21707848 -98576464 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 750 336 48 0 0 chr13 21708067 21708109 -98576203 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 3 750 983 78 14 0 chr13 21708128 21708269 -98576043 + (TTTC)n Simple_repeat Simple_repeat 1 143 0 3 750 460 302 95 0 chr13 21708307 21708433 -98575879 + ID_B1 SINE B4 82 219 -5 3 750 260 372 85 28 chr13 21708433 21708448 -98575864 + B1_Mur2 SINE Alu 1 149 0 3 750 435 184 13 0 chr13 21708702 21708778 -98575534 - B3 SINE B2 -8 208 132 3 750 438 20 0 0 chr13 21708966 21709017 -98575295 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 750 189 61 42 83 chr13 21709191 21709263 -98575049 + (TTATG)n Simple_repeat Simple_repeat 2 70 0 3 750 207 0 0 0 chr13 21709710 21709733 -98574579 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 750 511 313 15 44 chr13 21711647 21711764 -98572548 + ID_B1 SINE B4 90 206 -18 3 750 762 265 219 19 chr13 21711764 21712079 -98572233 + MTE2a LTR MaLR 2 379 0 3 750 511 313 15 44 chr13 21712079 21712098 -98572214 + ID_B1 SINE B4 207 222 -2 3 750 303 104 0 0 chr13 21712100 21712148 -98572164 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 3 750 683 366 10 0 chr13 21712588 21712886 -98571426 + Lx8 LINE L1 6954 7254 -219 3 750 1966 157 3 12 chr13 21712952 21713274 -98571038 - ORR1A2 LTR MaLR -8 319 1 3 750 5889 259 95 26 chr13 21713452 21714056 -98570256 + Lx7 LINE L1 789 1437 -4443 3 750 333 0 0 0 chr13 21714056 21714093 -98570219 + (CAA)n Simple_repeat Simple_repeat 2 38 0 3 750 5889 217 46 39 chr13 21714093 21714167 -98570145 + Lx7 LINE L1 1438 1501 -4379 3 750 1322 144 0 47 chr13 21714167 21714400 -98569912 - URR1A DNA MER1_type 0 226 5 3 750 5889 217 46 39 chr13 21714400 21715729 -98568583 + Lx7 LINE L1 1502 2869 -3011 3 750 4580 249 50 77 chr13 21715740 21716766 -98567546 + Lx7 LINE L1 5096 6094 -1602 3 750 1139 88 7 0 chr13 21716766 21716913 -98567399 + B1_Mus1 SINE Alu 1 148 0 3 750 4580 249 48 107 chr13 21716913 21717338 -98566974 + Lx7 LINE L1 6095 6416 -1280 3 750 1138 49 21 0 chr13 21717338 21717482 -98566830 - B1_Mus2 SINE Alu 0 147 1 3 750 4580 249 48 107 chr13 21717482 21718250 -98566062 + Lx7 LINE L1 6417 7224 -472 3 750 201 39 0 0 chr13 21718316 21718342 -98565970 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 750 320 292 0 0 chr13 21718496 21718585 -98565727 - Lx7 LINE L1 -389 7307 7219 3 750 288 0 0 0 chr13 21718613 21718645 -98565667 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 750 380 331 73 52 chr13 21718808 21719136 -98565176 - HERV16-int LTR ERVL -2630 2366 2032 4 750 313 368 34 0 chr13 21719138 21719255 -98565057 - RSINE1 SINE B4 -30 135 15 4 750 24 0 0 0 chr13 21719430 21719454 -98564858 + AT_rich Low_complexity Low_complexity 1 24 0 4 750 3082 240 66 12 chr13 21719506 21720247 -98564065 + Lx6 LINE L1 6678 7458 -2 4 750 482 282 107 11 chr13 21720640 21720997 -98563315 - L1MC LINE L1 -886 5458 5057 4 750 516 265 128 32 chr13 21721004 21721285 -98563027 - L1MC LINE L1 -1331 4815 4508 4 750 353 263 26 0 chr13 21721272 21721386 -98562926 + L1MD LINE L1 2601 2717 -3429 4 750 1582 157 4 0 chr13 21721437 21721686 -98562626 - ORR1A3 LTR MaLR -2 324 75 4 750 2990 8 45 3 chr13 21721686 21722038 -98562274 - IAPLTR1_Mm LTR ERVK 0 367 1 4 750 53243 22 15 2 chr13 21722038 21728426 -98555886 - IAPEz-int LTR ERVK 0 6481 8 4 750 3022 8 45 3 chr13 21728426 21728778 -98555534 - IAPLTR1_Mm LTR ERVK 0 367 1 4 750 521 125 0 0 chr13 21728778 21728858 -98555454 - ORR1A3 LTR MaLR -247 80 1 4 750 254 290 30 79 chr13 21728858 21728935 -98555377 - MLT1C LTR MaLR -50 417 346 4 750 336 308 23 28 chr13 21728991 21729168 -98555144 + L1MB8 LINE L1 5992 6167 -11 4 750 2403 257 31 36 chr13 21729230 21730109 -98554203 + L1_Rod LINE L1 3224 4097 -1750 4 750 441 0 0 0 chr13 21731592 21731641 -98552671 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 750 2122 235 21 14 chr13 21731893 21732466 -98551846 + L1_Mur3 LINE L1 4692 5268 -612 4 750 248 258 0 16 chr13 21732485 21732548 -98551764 + GA-rich Low_complexity Low_complexity 3 64 0 4 750 1318 85 6 6 chr13 21733121 21733298 -98551014 + B2_Mm2 SINE B2 1 177 -18 4 750 195 42 0 0 chr13 21734803 21734827 -98549485 + (T)n Simple_repeat Simple_repeat 1 24 0 4 750 1169 55 14 0 chr13 21734827 21734972 -98549340 - B1_Mm SINE Alu 0 147 1 4 750 566 241 82 14 chr13 21735994 21736141 -98548171 - ID_B1 SINE B4 -40 184 28 4 750 261 261 31 0 chr13 21736092 21736157 -98548155 - ID4 SINE ID -6 77 11 4 750 15061 38 4 1 chr13 21736157 21738117 -98546195 - L1_Mm LINE L1 -2062 3821 1855 4 750 3221 183 25 8 chr13 21738267 21738899 -98545413 - Lx3C LINE L1 0 6976 6334 4 750 349 248 117 18 chr13 21738916 21739027 -98545285 - RMER1B Other Other -26 1040 919 4 750 748 209 9 80 chr13 21739148 21739361 -98544951 - RMER1B Other Other -368 698 501 4 750 1349 109 68 5 chr13 21739610 21739831 -98544481 + L1VL4 LINE L1 194 428 -5874 4 750 11383 142 21 1 chr13 21739867 21740686 -98543626 + L1_Mur2 LINE L1 2641 3477 -2400 4 750 269 26 26 0 chr13 21740686 21740724 -98543588 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 750 11383 142 21 1 chr13 21740724 21741952 -98542360 + L1_Mur2 LINE L1 3478 4728 -1149 4 750 291 86 27 54 chr13 21741953 21742027 -98542285 + A-rich Low_complexity Low_complexity 4 75 0 4 750 2837 52 66 0 chr13 21742030 21742394 -98541918 + RLTR10 LTR ERVK 1 388 -2 4 750 3906 45 13 14 chr13 21742406 21743288 -98541024 + RLTR10-int LTR ERVK 40 992 -995 4 750 473 297 24 24 chr13 21743428 21743736 -98540576 + IAP-d-int LTR ERVK 822 1061 -5481 4 750 8097 24 2 8 chr13 21743818 21744821 -98539491 + RLTR10-int LTR ERVK 990 1986 -1 4 750 2895 52 57 0 chr13 21744821 21745188 -98539124 + RLTR10 LTR ERVK 1 388 -2 4 750 6525 138 35 6 chr13 21745195 21747033 -98537279 + Lx2 LINE L1 4737 6641 -356 4 750 1451 104 4 22 chr13 21747035 21747262 -98537050 + Lx2 LINE L1 6775 6997 0 4 750 253 203 15 30 chr13 21747285 21747351 -98536961 - L1_Rod LINE L1 -773 5074 5010 4 750 2804 85 0 3 chr13 21747414 21747791 -98536521 - L1_Mus4 LINE L1 -8 6628 6253 4 750 197 292 48 86 chr13 21748107 21748212 -98536100 + L2a LINE L2 3027 3127 -299 4 750 632 326 50 50 chr13 21749112 21749412 -98534900 - ORR1E LTR MaLR -41 318 19 4 750 790 158 11 44 chr13 21751250 21751530 -98532782 + CT-rich Low_complexity Low_complexity 1 270 0 4 750 911 92 0 23 chr13 21751535 21751668 -98532644 - B1_Mus1 SINE Alu -1 147 18 4 750 548 278 16 60 chr13 21751668 21751719 -98532593 - ID_B1 SINE B4 0 224 49 4 750 295 287 163 8 chr13 21751862 21751985 -98532327 + B1_Mur3 SINE Alu 2 143 -6 4 750 342 0 0 0 chr13 21754094 21754132 -98530180 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 750 34 42 0 0 chr13 21754305 21754353 -98529959 + AT_rich Low_complexity Low_complexity 1 48 0 4 750 489 138 0 0 chr13 21755438 21755518 -98528794 + (GA)n Simple_repeat Simple_repeat 1 80 0 4 750 1151 141 11 5 chr13 21755832 21756017 -98528295 + B2_Mm2 SINE B2 1 186 -9 4 750 513 255 0 0 chr13 21757505 21757611 -98526701 - PB1D7 SINE Alu 0 120 15 4 93 3864 221 43 63 chr13 21757857 21759183 -98525129 - L1_Rod LINE L1 -175 5672 4374 4 751 425 272 53 77 chr13 21759178 21759425 -98524887 + Lx9 LINE L1 5815 6055 -1589 4 751 580 254 25 34 chr13 21759452 21759656 -98524656 + Lx9 LINE L1 7275 7476 -168 4 751 589 255 121 16 chr13 21759841 21760148 -98524164 + L1M1 LINE L1 5312 5650 -653 4 751 630 281 179 14 chr13 21760163 21760661 -98523651 + L1MA6 LINE L1 5696 6275 -25 4 751 441 0 0 0 chr13 21761217 21761266 -98523046 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 751 518 258 98 30 chr13 21761596 21761760 -98522552 - B3 SINE B2 0 216 42 4 751 3469 131 120 41 chr13 21761763 21762561 -98521751 - RLTR13D2 LTR ERVK -2 1021 1 4 751 1243 216 179 20 chr13 21762600 21762958 -98521354 - MTD LTR MaLR -4 415 1 4 751 1564 236 83 5 chr13 21764108 21764495 -98519817 - MTD LTR MaLR 0 419 3 4 751 655 266 18 60 chr13 21764700 21764868 -98519444 - B3 SINE B2 -6 210 50 4 751 700 279 30 24 chr13 21764859 21765024 -98519288 + B3 SINE B2 27 192 -24 4 751 272 65 0 83 chr13 21767285 21767369 -98516943 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 751 427 357 79 45 chr13 21768217 21768484 -98515828 - B4 SINE B4 -16 276 1 4 751 237 132 0 0 chr13 21768492 21768530 -98515782 + (T)n Simple_repeat Simple_repeat 1 38 0 4 751 207 0 0 0 chr13 21769598 21769621 -98514691 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 751 480 303 18 11 chr13 21769629 21769645 -98514667 - PB1D10 SINE Alu -6 141 81 4 751 301 343 29 0 chr13 21769645 21769747 -98514565 - ID_B1 SINE B4 -48 176 72 4 751 480 303 18 11 chr13 21769747 21769765 -98514547 - PB1D10 SINE Alu -6 80 2 4 751 24 0 0 0 chr13 21770335 21770359 -98513953 + AT_rich Low_complexity Low_complexity 1 24 0 4 751 1104 281 111 4 chr13 21770480 21770948 -98513364 - Lx8 LINE L1 -29 7444 6927 4 751 2146 273 109 19 chr13 21770974 21771700 -98512612 - Lx8 LINE L1 -817 6656 5874 4 751 333 123 0 0 chr13 21771700 21771765 -98512547 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 751 4086 247 101 24 chr13 21771765 21773337 -98510975 - Lx8 LINE L1 -28 5852 4159 4 751 971 228 51 36 chr13 21773358 21773690 -98510622 + RLTR15 LTR ERVK 2 338 -21 4 751 1113 82 7 0 chr13 21774423 21774569 -98509743 - B1_Mus2 SINE Alu 0 147 1 4 751 374 263 39 29 chr13 21774688 21774790 -98509522 - PB1D7 SINE Alu -8 112 10 4 751 3189 156 52 11 chr13 21775695 21776313 -98507999 + Lx9 LINE L1 6995 7637 -7 4 751 443 302 23 31 chr13 21776915 21777045 -98507267 + ID_B1 SINE B4 78 206 -18 4 751 849 296 130 12 chr13 21777103 21777442 -98506870 + MTEb LTR MaLR 1 379 0 4 751 1515 228 119 32 chr13 21777472 21778067 -98506245 + Lx9 LINE L1 5152 5826 -54 4 751 509 241 142 41 chr13 21778073 21778242 -98506070 + MTC LTR MaLR 1 186 -235 4 751 285 298 105 0 chr13 21778260 21778374 -98505938 + MTC LTR MaLR 294 419 0 4 751 588 262 66 58 chr13 21778376 21778729 -98505583 + Lx9 LINE L1 5837 6192 -1504 4 751 4003 96 24 0 chr13 21778732 21779283 -98505029 + L1_Mm LINE L1 5120 5683 -200 4 751 7966 46 13 8 chr13 21779280 21780252 -98504060 - L1Md_T LINE L1 -1 6581 5605 4 751 7691 62 10 27 chr13 21780210 21781207 -98503105 + L1_Mus1 LINE L1 5587 6566 -1 4 751 189 0 0 0 chr13 21781245 21781266 -98503046 + (A)n Simple_repeat Simple_repeat 1 21 0 4 751 2535 301 30 28 chr13 21781304 21782159 -98502153 + Lx9 LINE L1 6367 7223 -421 4 751 337 117 67 0 chr13 21782175 21782235 -98502077 - MTC LTR MaLR -348 73 10 4 751 343 166 269 9 chr13 21782255 21782372 -98501940 + L1MD2 LINE L1 6209 6304 -55 4 751 532 367 0 11 chr13 21782401 21782583 -98501729 + B3A SINE B2 3 182 -16 4 751 612 297 86 31 chr13 21782659 21782916 -98501396 + B4 SINE B4 22 292 0 4 751 364 289 74 83 chr13 21782980 21783399 -98500913 + L1MC4a LINE L1 6146 6560 -1322 4 751 423 0 0 0 chr13 21783399 21783446 -98500866 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 751 696 121 0 0 chr13 21783446 21783578 -98500734 + (GA)n Simple_repeat Simple_repeat 1 132 0 4 751 279 283 32 32 chr13 21783597 21783692 -98500620 - MLT1A1 LTR MaLR -7 401 307 4 751 779 193 7 14 chr13 21783884 21784031 -98500281 + B1_Mur2 SINE Alu 3 148 -1 4 751 301 0 68 0 chr13 21784031 21784075 -98500237 + (CAAAAA)n Simple_repeat Simple_repeat 1 47 0 4 751 386 303 52 15 chr13 21784180 21784314 -98499998 + L1MC4a LINE L1 6689 6827 -1055 4 751 233 260 63 25 chr13 21785332 21785411 -98498901 - MER76 LTR ERVL -265 426 345 4 751 225 0 0 0 chr13 21785692 21785717 -98498595 + (TTATG)n Simple_repeat Simple_repeat 3 27 0 4 751 1421 238 71 13 chr13 21786805 21787200 -98497112 - MTD LTR MaLR -1 418 1 4 751 385 295 95 8 chr13 21787566 21787791 -98496521 - L1MEg2 LINE L1 -5989 463 54 4 751 356 287 50 0 chr13 21787870 21787971 -98496341 + Arthur1B DNA Tip100 1 106 -1119 4 751 391 182 16 24 chr13 21788270 21788394 -98495918 + GA-rich Low_complexity Low_complexity 5 127 0 4 751 429 259 45 18 chr13 21788394 21788618 -98495694 + L1M2 LINE L1 2932 3161 -2982 4 751 326 286 48 8 chr13 21788902 21789063 -98495249 + L1MC4 LINE L1 6447 6620 -1262 4 751 291 297 113 39 chr13 21789245 21789476 -98494836 + L1MC4 LINE L1 6936 7183 -859 4 751 296 171 305 0 chr13 21789683 21789765 -98494547 + PB1D10 SINE Alu 4 110 -7 4 751 186 43 0 0 chr13 21792865 21792888 -98491424 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 751 247 292 107 56 chr13 21792892 21793070 -98491242 + ID_B1 SINE B4 6 192 -32 4 751 1170 48 0 52 chr13 21793148 21793302 -98491010 - B1_Mur4 SINE Alu -3 147 2 4 751 1851 157 125 6 chr13 21793818 21794178 -98490134 + MTB_Mm LTR MaLR 2 404 -3 4 751 708 205 39 17 chr13 21796542 21796722 -98487590 - B3 SINE B2 -3 190 1 4 751 293 282 33 41 chr13 21796959 21797081 -98487231 - MER5A DNA MER1_type -63 126 6 4 751 21 36 0 0 chr13 21797599 21797627 -98486685 + AT_rich Low_complexity Low_complexity 1 28 0 5 751 432 0 0 0 chr13 21798854 21798902 -98485410 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 5 751 417 128 51 0 chr13 21798902 21798980 -98485332 - B1_Mur3 SINE Alu -10 139 58 5 751 455 249 18 42 chr13 21798979 21799147 -98485165 - RLTR12B LTR ERVK -345 183 20 5 751 1819 88 23 0 chr13 21799627 21799887 -98484425 - ORR1A2 LTR MaLR -57 270 5 5 751 258 305 16 146 chr13 21800424 21800547 -98483765 + RSINE1 SINE B4 47 153 -12 5 751 288 0 0 0 chr13 21800547 21800579 -98483733 + (CCA)n Simple_repeat Simple_repeat 1 32 0 5 751 236 282 47 77 chr13 21800669 21800838 -98483474 + MER92B LTR ERV1 442 605 -31 5 751 307 227 72 0 chr13 21801006 21801103 -98483209 - L1MD LINE L1 -894 5252 5149 5 751 211 204 0 0 chr13 21801397 21801446 -98482866 + T-rich Low_complexity Low_complexity 5 53 0 5 751 280 242 89 22 chr13 21801699 21801834 -98482478 + LTR37A LTR ERV1 280 423 -3 5 751 625 14 0 0 chr13 21802448 21802519 -98481793 + tRNA-Gly-GGY tRNA tRNA 1 71 -3 5 751 651 0 0 0 chr13 21802862 21802934 -98481378 + tRNA-Met-i tRNA tRNA 1 72 -3 5 751 26 0 0 0 chr13 21803983 21804009 -98480303 + AT_rich Low_complexity Low_complexity 1 26 0 5 751 699 104 0 0 chr13 21804077 21804183 -98480129 + (TTC)n Simple_repeat Simple_repeat 2 107 0 5 751 216 0 0 0 chr13 21805846 21805870 -98478442 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 751 279 299 57 94 chr13 21806138 21806382 -98477930 + MLT1B LTR MaLR 68 302 -88 5 751 347 241 69 0 chr13 21808893 21808980 -98475332 + B1_Mur3 SINE Alu 49 141 -8 5 751 365 272 34 26 chr13 21812106 21812223 -98472089 - B1_Mm SINE Alu -23 124 7 5 751 233 311 93 13 chr13 21812725 21812800 -98471512 - RSINE1 SINE B4 -28 137 57 5 751 186 43 0 0 chr13 21812892 21812915 -98471397 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 5 751 1092 88 0 0 chr13 21815060 21815197 -98469115 - B1_Mus2 SINE Alu -10 137 1 5 751 857 191 215 76 chr13 21815351 21815719 -98468593 - MTD LTR MaLR 0 419 1 5 751 223 314 38 38 chr13 21816068 21816174 -98468138 - PB1D7 SINE Alu -6 114 9 5 751 1370 76 21 11 chr13 21816611 21816798 -98467514 - B2_Mm2 SINE B2 -3 192 4 5 751 793 161 0 0 chr13 21816975 21817105 -98467207 - B1_Mus2 SINE Alu -9 138 9 5 751 812 197 98 5 chr13 21817805 21818009 -98466303 - RLTR40 LTR ERVK -594 223 1 5 751 261 0 0 0 chr13 21818420 21818449 -98465863 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 751 498 268 39 8 chr13 21818449 21818566 -98465746 - B3 SINE B2 -29 187 69 5 751 504 0 0 0 chr13 21819367 21819423 -98464889 + (GAAAA)n Simple_repeat Simple_repeat 5 60 0 5 751 3838 56 117 8 chr13 21820302 21820807 -98463505 - LTRIS2 LTR ERV1 0 564 5 5 751 406 215 142 47 chr13 21821158 21821176 -98463136 + B3 SINE B2 1 19 -197 5 751 2723 95 147 11 chr13 21821176 21821644 -98462668 - RLTR47_MM LTR ERV1 0 532 1 5 751 406 215 142 47 chr13 21821644 21821752 -98462560 + B3 SINE B2 20 139 -77 5 751 552 231 29 17 chr13 21822012 21822184 -98462128 + RMER5 LTR ERV1 323 496 -38 5 751 1300 14 0 0 chr13 21822542 21822689 -98461623 + B1_Mus2 SINE Alu 1 147 0 5 751 362 292 74 16 chr13 21822731 21822853 -98461459 - RMER10B LTR ERVL 0 398 270 5 751 2051 152 84 0 chr13 21824801 21825182 -98459130 - MTC LTR MaLR -8 413 1 5 751 1750 299 89 52 chr13 21827925 21828962 -98455350 - L1_Rod LINE L1 -53 5794 4728 5 751 288 0 0 0 chr13 21828962 21828994 -98455318 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 751 1750 299 89 52 chr13 21828994 21829187 -98455125 - L1_Rod LINE L1 -1120 4727 4518 5 751 192 77 0 0 chr13 21829731 21829757 -98454555 + (CTG)n Simple_repeat Simple_repeat 1 26 0 5 751 1431 192 186 127 chr13 21829827 21830370 -98453942 + MT2B2 LTR ERVL 1 575 -9 5 751 2825 219 65 72 chr13 21830379 21831197 -98453115 + MERVL-int LTR ERVL 1 812 -4673 5 751 334 161 0 0 chr13 21831199 21831261 -98453051 + MTB_Mm-int LTR MaLR 1188 1249 -9 5 751 1737 174 107 19 chr13 21831265 21831337 -98452975 + MTB_Mm LTR MaLR 4 75 -332 5 751 180 0 0 0 chr13 21831337 21831357 -98452955 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 751 1737 174 107 19 chr13 21831357 21831648 -98452664 + MTB_Mm LTR MaLR 76 398 -9 5 751 290 261 149 26 chr13 21831669 21831783 -98452529 + RMER12 LTR ERVK 18 145 -1177 5 751 258 151 0 19 chr13 21832322 21832376 -98451936 + RLTR22_Mur LTR ERVK 529 581 -1227 5 751 6796 129 77 139 chr13 21832448 21833037 -98451275 + RLTR21 LTR ERVK 3 612 -960 5 751 414 39 0 0 chr13 21833037 21833089 -98451223 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 5 751 1549 58 16 0 chr13 21833099 21833287 -98451025 - B2_Mm2 SINE B2 -4 191 1 5 751 6796 129 77 139 chr13 21833287 21833804 -98450508 + RLTR21 LTR ERVK 613 1093 -479 5 751 258 56 0 0 chr13 21833804 21833840 -98450472 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 751 6796 129 77 139 chr13 21833840 21834107 -98450205 + RLTR21 LTR ERVK 1094 1302 -270 5 751 504 48 0 0 chr13 21834107 21834170 -98450142 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 751 6796 129 77 139 chr13 21834170 21834454 -98449858 + RLTR21 LTR ERVK 1303 1569 -3 5 751 603 221 19 106 chr13 21834468 21834716 -98449596 + RLTR22_Mur LTR ERVK 597 825 -983 5 751 1084 269 203 38 chr13 21834703 21834934 -98449378 + RLTR22_Mur LTR ERVK 1067 1339 -509 5 751 459 0 0 0 chr13 21834934 21834985 -98449327 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 751 1084 269 203 38 chr13 21834985 21835393 -98448919 + RLTR22_Mur LTR ERVK 1340 1811 -37 5 751 198 0 0 0 chr13 21835608 21835630 -98448682 + (T)n Simple_repeat Simple_repeat 1 22 0 5 751 890 300 45 18 chr13 21836065 21836401 -98447911 - L1_Rod LINE L1 -1667 4180 3836 5 751 9387 136 30 82 chr13 21836568 21837985 -98446327 + RLTR22_Mur LTR ERVK 1 1331 -517 5 751 1239 17 29 6 chr13 21837985 21838160 -98446152 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 751 9387 136 30 82 chr13 21838160 21838686 -98445626 + RLTR22_Mur LTR ERVK 1332 1843 -5 5 751 39 0 0 0 chr13 21839924 21839963 -98444349 + AT_rich Low_complexity Low_complexity 1 39 0 5 751 186 71 0 0 chr13 21840674 21840702 -98443610 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 5 751 445 299 43 7 chr13 21840817 21840955 -98443357 - B3A SINE B2 -53 145 3 5 751 230 284 37 0 chr13 21841226 21841307 -98443005 - L2 LINE L2 -1059 2360 2277 5 751 227 135 0 0 chr13 21841557 21841594 -98442718 + 4.5SRNA scRNA scRNA 40 76 -18 5 751 243 0 0 0 chr13 21841734 21841761 -98442551 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 751 893 250 95 41 chr13 21843306 21843683 -98440629 + RMER5 LTR ERV1 18 438 -96 5 751 495 0 0 0 chr13 21843759 21843814 -98440498 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 751 264 293 24 12 chr13 21844457 21844540 -98439772 - B3A SINE B2 -114 84 1 5 751 225 0 0 0 chr13 21848115 21848140 -98436172 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 5 751 216 97 0 0 chr13 21849441 21849472 -98434840 + (T)n Simple_repeat Simple_repeat 1 31 0 5 751 948 92 49 7 chr13 21849473 21849615 -98434697 - B1_Mus1 SINE Alu 0 148 1 5 751 407 347 26 24 chr13 21850244 21850622 -98433690 - MYSERV6-int LTR ERVK -4648 4311 3933 5 751 1207 54 7 0 chr13 21851114 21851261 -98433051 + B1_Mus1 SINE Alu 1 148 0 5 751 463 185 22 0 chr13 21851426 21851518 -98432794 + RLTR25B LTR ERVK 3 96 -1007 5 751 1741 181 102 25 chr13 21851540 21851971 -98432341 + RMER16 LTR ERVK 70 533 0 5 751 3974 171 72 40 chr13 21851971 21852884 -98431428 + RLTR25B LTR ERVK 87 1028 0 5 751 967 88 0 14 chr13 21853062 21853200 -98431112 - B1_Mm SINE Alu 0 147 12 5 751 3230 51 0 16 chr13 21853200 21853642 -98430670 - LTRIS2 LTR ERV1 0 564 130 5 751 507 172 0 75 chr13 21853633 21853740 -98430572 + RLTR23 LTR ERV1 332 430 0 5 751 1079 89 0 0 chr13 21854198 21854344 -98429968 + B1_Mm SINE Alu 2 147 0 5 751 567 144 62 0 chr13 21854368 21854465 -98429847 - B1_Mus1 SINE Alu -12 136 34 5 751 858 152 168 25 chr13 21854466 21854662 -98429650 - RLTR42-int LTR ERVK -4162 1360 1137 5 751 3223 98 40 67 chr13 21854663 21855263 -98429049 - RLTR6_Mm LTR ERV1 -70 584 1 5 751 24041 26 35 17 chr13 21855263 21858138 -98426174 - MMVL30-int LTR ERV1 0 3698 772 5 751 388 179 118 40 chr13 21858486 21858638 -98425674 - MMVL30-int LTR ERV1 -7023 533 280 5 751 6656 24 46 17 chr13 21858632 21859438 -98424874 - RLTR6-int LTR ERV1 -6949 829 1 5 751 3359 98 39 65 chr13 21859439 21860059 -98424253 - RLTR6_Mm LTR ERV1 -50 604 1 5 751 369 0 0 0 chr13 21861418 21861459 -98422853 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 5 751 1101 67 0 0 chr13 21861459 21861593 -98422719 - B1_Mus1 SINE Alu -12 136 3 5 751 2364 99 0 11 chr13 21862345 21862702 -98421610 + MTB_Mm LTR MaLR 1 353 -54 5 751 198 91 0 0 chr13 21862956 21862989 -98421323 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 5 751 506 301 46 46 chr13 21863102 21863321 -98420991 - MTEb LTR MaLR -132 247 29 5 751 2685 76 173 14 chr13 21863332 21863748 -98420564 + RLTR45 LTR ERVK 1 482 0 5 751 1224 223 15 100 chr13 21863864 21864273 -98420039 - ORR1D1 LTR MaLR 0 374 1 5 751 249 216 122 0 chr13 21864472 21864546 -98419766 + B1F1 SINE Alu 5 87 -30 5 751 271 280 0 26 chr13 21864565 21864642 -98419670 + B3A SINE B2 1 75 -123 5 751 774 239 181 10 chr13 21864711 21865020 -98419292 - ORR1D2 LTR MaLR 0 370 9 5 751 2078 143 33 3 chr13 21865417 21865753 -98418559 - ORR1A1 LTR MaLR 0 346 1 5 751 9917 138 45 15 chr13 21865760 21866338 -98417974 - ORR1A1-int LTR MaLR -14 1949 1377 5 751 422 243 186 100 chr13 21866338 21866677 -98417635 - RLTR9A LTR ERVK 0 368 1 5 751 9917 138 45 15 chr13 21866677 21867989 -98416323 - ORR1A1-int LTR MaLR -587 1376 2 5 751 233 132 55 36 chr13 21867989 21868040 -98416272 + tRNA-Leu-TTA tRNA tRNA 35 86 0 5 751 2054 140 32 9 chr13 21868045 21868383 -98415929 - ORR1A1 LTR MaLR 0 346 1 5 751 495 0 0 0 chr13 21869275 21869330 -98414982 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 751 24 0 0 0 chr13 21869703 21869727 -98414585 + AT_rich Low_complexity Low_complexity 1 24 0 5 751 425 103 15 0 chr13 21870543 21870611 -98413701 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 751 641 283 43 0 chr13 21873145 21873329 -98410983 + B3 SINE B2 14 205 -11 5 751 703 200 0 15 chr13 21873712 21873849 -98410463 + B1_Mus1 SINE Alu 14 148 0 5 751 241 305 46 78 chr13 21873713 21873866 -98410446 + B4A SINE B4 99 246 -46 5 751 238 288 44 74 chr13 21874080 21874215 -98410097 + ID_B1 SINE B4 94 224 0 5 751 189 0 0 0 chr13 21875591 21875612 -98408700 + (A)n Simple_repeat Simple_repeat 1 21 0 6 751 351 0 0 0 chr13 21876748 21876787 -98407525 + (TTA)n Simple_repeat Simple_repeat 2 40 0 6 751 278 50 25 0 chr13 21877380 21877420 -98406892 + (GAAAA)n Simple_repeat Simple_repeat 4 44 0 6 751 260 307 86 8 chr13 21880317 21880445 -98403867 - B1_Mus1 SINE Alu 0 148 11 6 751 1689 21 0 20 chr13 21882148 21882344 -98401968 + B2_Mm1t SINE B2 2 193 0 6 751 237 343 114 0 chr13 21882701 21882806 -98401506 + B1_Mus1 SINE Alu 24 140 -8 6 751 189 0 0 0 chr13 21883250 21883271 -98401041 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 6 751 320 48 15 45 chr13 21883516 21883582 -98400730 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 6 751 501 229 29 58 chr13 21883582 21883721 -98400591 - B1_Mus1 SINE Alu -13 135 1 6 751 21 36 0 0 chr13 21883811 21883839 -98400473 + AT_rich Low_complexity Low_complexity 1 28 0 6 751 925 285 101 32 chr13 21883948 21884325 -98399987 + MTD LTR MaLR 2 404 -15 6 751 377 273 72 59 chr13 21884460 21884612 -98399700 + ID_B1 SINE B4 15 168 -56 6 751 213 286 69 30 chr13 21884541 21884642 -98399670 + PB1D10 SINE Alu 13 117 0 6 751 411 274 26 0 chr13 21884933 21885050 -98399262 + PB1D9 SINE Alu 1 120 0 6 751 21 0 0 0 chr13 21885054 21885075 -98399237 + GC_rich Low_complexity Low_complexity 1 21 0 6 751 503 235 59 94 chr13 21885319 21885521 -98398791 - B3A SINE B2 -1 197 3 6 751 650 315 63 54 chr13 21885582 21885917 -98398395 + MLT2B4 LTR ERVL 20 357 -199 6 751 237 231 0 97 chr13 21886238 21886284 -98398028 - tRNA-Thr-ACG_ tRNA tRNA -7 70 30 6 751 3215 49 110 23 chr13 21886284 21886721 -98397591 - MT2C_Mm LTR ERVL 0 475 1 6 751 237 231 0 97 chr13 21886721 21886746 -98397566 - tRNA-Thr-ACG_ tRNA tRNA -48 29 6 6 751 207 229 33 0 chr13 21887060 21887121 -98397191 + A-rich Low_complexity Low_complexity 4 66 0 6 751 212 158 0 0 chr13 21887196 21887234 -98397078 + ID SINE ID 29 66 -158 6 751 244 300 25 0 chr13 21887236 21887316 -98396996 + B1F2 SINE Alu 6 87 -62 6 751 188 61 0 57 chr13 21887409 21887444 -98396868 + (CCCCCA)n Simple_repeat Simple_repeat 2 34 0 6 751 553 145 0 0 chr13 21887667 21887750 -98396562 + tRNA-Leu-TTA tRNA tRNA 1 83 -3 6 93 4968 187 71 19 chr13 21888092 21889121 -98395191 + MERVL_2A-int LTR ERVL 1866 2947 -2814 6 752 437 195 147 49 chr13 21889121 21889283 -98395029 - ORR1A4 LTR MaLR -171 158 18 6 752 2754 248 55 9 chr13 21889283 21889919 -98394393 + MERVL_2A-int LTR ERVL 4385 5049 -712 6 752 469 196 152 0 chr13 21890241 21890353 -98393959 - B1_Mur2 SINE Alu -7 142 14 6 752 212 161 0 51 chr13 21890630 21890689 -98393623 + T-rich Low_complexity Low_complexity 1 56 0 6 752 214 146 0 40 chr13 21891175 21891225 -98393087 + (CAA)n Simple_repeat Simple_repeat 2 49 0 6 752 204 40 0 0 chr13 21892277 21892302 -98392010 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 6 752 412 215 11 43 chr13 21892319 21892504 -98391808 + (TA)n Simple_repeat Simple_repeat 1 179 0 6 752 213 39 0 0 chr13 21892942 21892968 -98391344 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 752 930 78 0 0 chr13 21893050 21893178 -98391134 + (GA)n Simple_repeat Simple_repeat 1 128 0 6 752 555 276 105 132 chr13 21893412 21893850 -98390462 + RLTR23 LTR ERV1 5 430 0 6 752 212 175 0 0 chr13 21894354 21894394 -98389918 + A-rich Low_complexity Low_complexity 1 40 0 6 752 267 284 62 0 chr13 21894412 21894493 -98389819 + RMER30 DNA MER1_type 83 168 -34 6 752 327 301 0 0 chr13 21894970 21895043 -98389269 - tRNA-Gln-CAA tRNA tRNA -2 73 1 6 752 245 197 128 26 chr13 21895356 21895434 -98388878 - Lx8 LINE L1 -1 7472 7387 6 752 461 311 46 92 chr13 21895601 21895972 -98388340 + RLTR23 LTR ERV1 77 430 0 6 752 1021 305 97 9 chr13 21895978 21896402 -98387910 - Lx8 LINE L1 -155 7318 6858 6 752 456 269 23 46 chr13 21896408 21896582 -98387730 - RLTR15 LTR ERVK -13 346 177 6 752 852 268 44 52 chr13 21896582 21896925 -98387387 + RLTR15 LTR ERVK 1 340 -19 6 752 1519 258 166 45 chr13 21896936 21897513 -98386799 - Lx8 LINE L1 -610 6863 6217 6 752 351 0 0 0 chr13 21898184 21898223 -98386089 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 752 603 278 27 85 chr13 21898563 21898787 -98385525 - B3 SINE B2 -5 211 1 6 752 378 0 0 0 chr13 21898893 21898935 -98385377 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 6 752 328 293 141 76 chr13 21899844 21899868 -98384444 + L1MEg LINE L1 846 868 -5516 6 752 827 149 97 0 chr13 21899868 21900002 -98384310 + B1_Mus2 SINE Alu 1 147 0 6 752 376 293 141 76 chr13 21900002 21900082 -98384230 + L1MEg LINE L1 2198 2270 -4208 6 752 1210 61 0 0 chr13 21900082 21900230 -98384082 + B1_Mus1 SINE Alu 1 148 0 6 752 376 318 102 55 chr13 21900230 21900408 -98383904 + L1MEg LINE L1 2271 2465 -4013 6 752 377 276 78 56 chr13 21903037 21903179 -98381133 - B1_Mur4 SINE Alu 0 150 6 6 752 6733 16 1 0 chr13 21904278 21905019 -98379293 + RLTR4_Mm LTR ERV1 1 742 0 6 752 55640 13 2 0 chr13 21905019 21911129 -98373183 + RLTR4_MM-int LTR ERV1 1 6124 -1477 6 752 1861 15 0 0 chr13 21911121 21911324 -98372988 + RLTR4_MM-int LTR ERV1 7399 7601 0 6 752 6733 16 1 0 chr13 21911324 21912065 -98372247 + RLTR4_Mm LTR ERV1 1 742 0 6 752 818 75 0 0 chr13 21912199 21912305 -98372007 - B1_Mus2 SINE Alu 0 147 42 6 752 234 218 112 56 chr13 21912242 21912349 -98371963 - RLTR25B LTR ERVK -519 509 397 6 752 181 253 45 57 chr13 21912363 21912451 -98371861 + L3 LINE CR1 1265 1351 -3138 6 752 453 174 244 0 chr13 21912483 21912598 -98371714 + B1_Mur3 SINE Alu 2 144 -5 6 752 349 249 166 34 chr13 21912598 21912773 -98371539 - B3A SINE B2 0 198 1 6 752 242 73 0 47 chr13 21913248 21913291 -98371021 - B1_Mm SINE Alu 0 147 107 6 752 710 231 167 88 chr13 21913782 21914123 -98370189 + RLTR9A LTR ERVK 1 368 0 6 752 302 276 25 108 chr13 21914165 21914368 -98369944 + RMER16-int LTR ERVK 47 232 -3082 6 752 204 55 0 53 chr13 21914434 21914472 -98369840 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 6 752 4314 175 71 60 chr13 21914594 21915719 -98368593 + RMER16-int LTR ERVK 292 2175 -5231 6 752 261 329 56 56 chr13 21915738 21915954 -98368358 - RLTR25B LTR ERVK 0 1028 813 6 752 337 85 0 0 chr13 21916093 21916140 -98368172 - RMER16-int LTR ERVK -2775 2631 2585 6 752 6978 117 32 33 chr13 21916139 21916951 -98367361 + RMER16-int LTR ERVK 2645 3448 -1958 6 752 1524 63 16 0 chr13 21916951 21917142 -98367170 + B2_Mm2 SINE B2 1 194 -1 6 752 6978 179 40 40 chr13 21917142 21917711 -98366601 + RMER16-int LTR ERVK 3449 3823 -1583 6 752 758 234 150 89 chr13 21918175 21918522 -98365790 + RLTR9A LTR ERVK 1 368 0 6 752 25 65 0 0 chr13 21919442 21919488 -98364824 + AT_rich Low_complexity Low_complexity 1 46 0 6 752 3219 56 2 15 chr13 21919576 21919977 -98364335 - MTA_Mm LTR MaLR 0 396 1 6 752 386 258 0 41 chr13 21920519 21920616 -98363696 - PB1D9 SINE Alu -15 105 13 6 752 599 247 26 52 chr13 21920774 21920966 -98363346 - B3A SINE B2 -11 187 1 6 752 2179 178 11 0 chr13 21921048 21921419 -98362893 + RLTR14 LTR ERV1 3 377 -5 6 752 459 268 15 52 chr13 21921422 21921556 -98362756 - B1_Mus1 SINE Alu -18 130 2 6 752 470 322 0 65 chr13 21922171 21922324 -98361988 + ID_B1 SINE B4 16 158 -66 6 752 396 252 53 68 chr13 21922331 21922463 -98361849 + B3A SINE B2 20 149 -49 6 752 1151 75 0 0 chr13 21922506 21922652 -98361660 + B1_Mus1 SINE Alu 3 148 0 6 752 453 174 244 0 chr13 21922872 21922987 -98361325 - B1_Mur3 SINE Alu -5 144 2 6 752 181 253 45 57 chr13 21923019 21923107 -98361205 - L3 LINE CR1 -3138 1351 1265 6 752 234 218 112 56 chr13 21923121 21923228 -98361084 + RLTR25B LTR ERVK 397 509 -519 6 752 818 75 0 0 chr13 21923165 21923271 -98361041 + B1_Mus2 SINE Alu 42 147 0 6 752 377 276 78 56 chr13 21924500 21924642 -98359670 + B1_Mur4 SINE Alu 6 150 0 6 752 376 318 102 55 chr13 21927271 21927449 -98356863 - L1MEg LINE L1 -4013 2465 2271 6 752 1210 61 0 0 chr13 21927449 21927597 -98356715 - B1_Mus1 SINE Alu 0 148 1 6 752 376 293 141 76 chr13 21927597 21927677 -98356635 - L1MEg LINE L1 -4208 2270 2198 6 752 827 149 97 0 chr13 21927677 21927811 -98356501 - B1_Mus2 SINE Alu 0 147 1 6 752 328 293 141 76 chr13 21927811 21927835 -98356477 - L1MEg LINE L1 -5516 868 846 6 752 378 0 0 0 chr13 21928744 21928786 -98355526 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 6 752 603 278 27 85 chr13 21928892 21929116 -98355196 + B3 SINE B2 1 211 -5 6 752 351 0 0 0 chr13 21929456 21929495 -98354817 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 752 1519 258 166 45 chr13 21930166 21930743 -98353569 + Lx8 LINE L1 6217 6863 -610 6 752 852 268 44 52 chr13 21930754 21931097 -98353215 - RLTR15 LTR ERVK -19 340 1 6 752 456 269 23 46 chr13 21931097 21931271 -98353041 + RLTR15 LTR ERVK 177 346 -13 6 752 1021 305 97 9 chr13 21931277 21931701 -98352611 + Lx8 LINE L1 6858 7318 -155 6 752 461 311 46 92 chr13 21931707 21932078 -98352234 - RLTR23 LTR ERV1 0 430 77 6 752 245 197 128 26 chr13 21932245 21932323 -98351989 + Lx8 LINE L1 7387 7472 -1 6 752 327 301 0 0 chr13 21932636 21932709 -98351603 + tRNA-Gln-CAA tRNA tRNA 1 73 -2 6 752 267 284 62 0 chr13 21933186 21933267 -98351045 - RMER30 DNA MER1_type -34 168 83 6 752 212 175 0 0 chr13 21933285 21933325 -98350987 + T-rich Low_complexity Low_complexity 1 40 0 6 752 555 276 105 132 chr13 21933829 21934267 -98350045 - RLTR23 LTR ERV1 0 430 5 6 752 789 82 0 0 chr13 21934501 21934611 -98349701 + (TC)n Simple_repeat Simple_repeat 1 110 0 6 752 213 39 0 0 chr13 21934693 21934719 -98349593 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 752 412 215 11 43 chr13 21935157 21935342 -98348970 + (TA)n Simple_repeat Simple_repeat 2 180 0 6 752 204 40 0 0 chr13 21935359 21935384 -98348928 + (CAGA)n Simple_repeat Simple_repeat 4 28 0 6 752 214 146 0 40 chr13 21936436 21936486 -98347826 + (TTG)n Simple_repeat Simple_repeat 2 49 0 6 752 212 161 0 51 chr13 21936972 21937031 -98347281 + A-rich Low_complexity Low_complexity 1 56 0 6 752 469 196 152 0 chr13 21937308 21937420 -98346892 + B1_Mur2 SINE Alu 14 142 -7 6 752 2754 248 55 9 chr13 21937742 21938378 -98345934 - MERVL_2A-int LTR ERVL -712 5049 4385 6 752 437 195 147 49 chr13 21938378 21938540 -98345772 + ORR1A4 LTR MaLR 18 158 -171 6 752 5006 190 71 12 chr13 21938555 21939560 -98344752 - MERVL_2A-int LTR ERVL -2832 2929 1866 6 752 608 108 0 0 chr13 21939890 21939973 -98344339 - tRNA-Leu-TTA tRNA tRNA -3 83 1 6 752 210 136 0 0 chr13 21940179 21940223 -98344089 + (G)n Simple_repeat Simple_repeat 1 44 0 7 752 269 300 25 0 chr13 21940316 21940396 -98343916 - B1F2 SINE Alu -62 87 6 7 752 221 184 0 0 chr13 21940398 21940436 -98343876 - ID SINE ID -158 66 29 7 752 231 65 65 0 chr13 21940514 21940560 -98343752 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 7 752 244 361 72 24 chr13 21940578 21940703 -98343609 + MLT1F-int LTR MaLR 1241 1371 -118 7 752 265 257 0 91 chr13 21940899 21940929 -98343383 + tRNA-Thr-ACG_ tRNA tRNA 1 29 -48 7 752 3158 56 110 23 chr13 21940929 21941366 -98342946 + MT2C_Mm LTR ERVL 1 475 0 7 752 265 254 0 101 chr13 21941366 21941420 -98342892 + tRNA-Thr-ACG_ tRNA tRNA 30 77 0 7 752 827 321 55 46 chr13 21941733 21942079 -98342233 - MLT2B4 LTR ERVL -199 357 9 7 752 524 246 44 79 chr13 21942120 21942323 -98341989 + B3A SINE B2 3 198 0 7 752 252 0 0 0 chr13 21942431 21942459 -98341853 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 7 752 494 239 26 0 chr13 21942576 21942693 -98341619 - PB1D9 SINE Alu 0 120 1 7 752 272 276 69 30 chr13 21942946 21943047 -98341265 - PB1D10 SINE Alu 0 117 13 7 752 449 266 72 59 chr13 21942976 21943128 -98341184 - ID_B1 SINE B4 -56 168 15 7 752 212 259 19 0 chr13 21943132 21943186 -98341126 - PB1D7 SINE Alu -18 102 48 7 752 904 273 66 82 chr13 21943269 21943756 -98340556 + L1MA8 LINE L1 5458 5936 -355 7 752 206 32 0 31 chr13 21944056 21944088 -98340224 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 752 592 120 101 17 chr13 21944871 21944990 -98339322 - RMER16 LTR ERVK 0 533 405 7 752 361 219 18 62 chr13 21945002 21945014 -98339298 + ORR1A3-int LTR MaLR 607 613 -1350 7 752 1714 142 205 26 chr13 21945014 21945439 -98338873 + MT2B LTR ERVL 1 575 -26 7 752 2453 153 85 16 chr13 21945439 21945945 -98338367 - RLTR20A LTR ERVK 0 541 1 7 752 231 73 24 24 chr13 21945945 21945977 -98338335 + MT2B LTR ERVL 553 584 0 7 752 1540 233 51 13 chr13 21946033 21946424 -98337888 - MTD LTR MaLR -13 406 1 7 752 221 0 0 33 chr13 21946614 21946644 -98337668 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 7 752 668 0 0 0 chr13 21947188 21947262 -98337050 - tRNA-Ile-ATT tRNA tRNA -3 74 1 7 752 234 62 0 0 chr13 21947310 21947342 -98336970 + (GCTG)n Simple_repeat Simple_repeat 2 33 0 7 752 365 58 19 0 chr13 21947368 21947420 -98336892 + (TCCC)n Simple_repeat Simple_repeat 1 53 0 7 752 670 14 0 0 chr13 21947889 21947963 -98336349 + tRNA-Thr-ACY_ tRNA tRNA 1 74 -3 7 752 231 227 0 0 chr13 21949016 21949060 -98335252 + CT-rich Low_complexity Low_complexity 4 47 0 7 752 331 264 18 45 chr13 21949266 21949377 -98334935 - ID_B1 SINE B4 -5 219 112 7 752 292 312 25 12 chr13 21949377 21949410 -98334902 - B1_Mur4 SINE Alu -1 145 1 7 752 1722 178 74 14 chr13 21949942 21950295 -98334017 + ORR1D1 LTR MaLR 1 374 0 7 752 298 247 130 30 chr13 21950525 21950625 -98333687 + PB1D7 SINE Alu 4 113 -7 7 752 448 250 46 2 chr13 21950654 21950774 -98333538 - B1F SINE Alu -21 126 4 7 752 413 257 4 11 chr13 21950845 21950964 -98333348 - PB1D7 SINE Alu -21 127 8 7 752 302 229 54 21 chr13 21951422 21951553 -98332759 - L1MEf LINE L1 -4031 3071 2981 7 752 777 257 83 11 chr13 21951796 21951850 -98332462 - RLTR22_Mur LTR ERVK -1043 805 746 7 752 189 0 0 0 chr13 21951850 21951871 -98332441 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 7 752 777 257 83 11 chr13 21951871 21952080 -98332232 - RLTR22_Mur LTR ERVK -1103 745 524 7 752 309 286 8 74 chr13 21952220 21952341 -98331971 + RLTR23 LTR ERV1 318 430 0 7 752 2323 182 48 48 chr13 21952349 21952909 -98331403 + RLTR31_Mm LTR ERVK 1 560 -1 7 752 938 161 16 69 chr13 21952910 21953070 -98331242 - L1_Mur2 LINE L1 -2808 3069 2917 7 752 1239 42 0 0 chr13 21953070 21953214 -98331098 + B1_Mus1 SINE Alu 5 148 0 7 752 938 161 16 69 chr13 21953214 21953300 -98331012 - L1_Mur2 LINE L1 -2961 2916 2836 7 752 5493 124 7 3 chr13 21955347 21956221 -98328091 - L1_Mur1 LINE L1 -1865 4021 3145 7 752 3887 112 28 2 chr13 21956217 21956798 -98327514 + Lx3B LINE L1 5214 5809 -77 7 752 609 49 304 0 chr13 21956798 21956900 -98327412 + B1_Mm SINE Alu 10 142 -5 7 752 2736 105 25 25 chr13 21956920 21957006 -98327306 + Lx3B LINE L1 5783 5872 -1101 7 752 6259 64 85 2 chr13 21957006 21957831 -98326481 + RLTR13B1 LTR ERVK 1 893 0 7 752 2736 105 25 25 chr13 21957831 21958176 -98326136 + Lx3B LINE L1 5873 6214 -759 7 752 596 71 119 0 chr13 21958167 21958251 -98326061 + Lx3B LINE L1 6504 6597 -376 7 752 2561 101 23 28 chr13 21958305 21958701 -98325611 - Lx3A LINE L1 -1 6980 6587 7 752 288 296 64 36 chr13 21959193 21959333 -98324979 + B1F SINE Alu 1 144 -5 7 752 2131 183 26 12 chr13 21959572 21959987 -98324325 + MTC LTR MaLR 1 421 0 7 752 3004 43 0 0 chr13 21960034 21960380 -98323932 - ORR1A0 LTR MaLR 0 346 1 7 752 4663 25 0 2 chr13 21960380 21960971 -98323341 - ORR1A0-int LTR MaLR 0 1792 1203 7 752 482 276 55 0 chr13 21961447 21961574 -98322738 - ID_B1 SINE B4 -7 217 84 7 752 21 0 0 0 chr13 21962317 21962338 -98321974 + AT_rich Low_complexity Low_complexity 1 21 0 7 752 845 271 12 105 chr13 21962543 21962877 -98321435 - BGLII_B LTR ERVK 0 441 120 7 752 297 155 0 0 chr13 21963180 21963238 -98321074 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 752 1289 60 0 0 chr13 21963666 21963832 -98320480 + L1_Mus2 LINE L1 6401 6566 0 7 752 334 317 13 109 chr13 21964033 21964189 -98320123 - B4 SINE B4 -136 156 16 7 752 21 0 0 0 chr13 21964323 21964344 -98319968 + AT_rich Low_complexity Low_complexity 1 21 0 7 752 2617 42 3 0 chr13 21964789 21965126 -98319186 + ORR1A1 LTR MaLR 1 338 -8 7 752 500 265 58 32 chr13 21968548 21968704 -98315608 + B3A SINE B2 37 196 -2 7 752 258 196 0 19 chr13 21968741 21968793 -98315519 - B3A SINE B2 -57 141 91 7 752 493 193 107 25 chr13 21968872 21968994 -98315318 + B3 SINE B2 84 215 -1 7 752 227 348 11 0 chr13 21969214 21969306 -98315006 - ORR1E LTR MaLR -223 136 44 7 752 305 152 284 37 chr13 21969515 21969624 -98314688 - MTC LTR MaLR -285 136 1 7 752 2701 148 75 2 chr13 21970887 21971382 -98312930 + MT2B LTR ERVL 1 531 -70 7 752 1637 100 165 14 chr13 21971534 21971819 -98312493 + ORR1A4 LTR MaLR 2 329 0 7 752 303 288 0 59 chr13 21972015 21972100 -98312212 + tRNA-Ser-TCG tRNA tRNA 1 80 -5 7 752 957 122 43 7 chr13 21972642 21972783 -98311529 - B1_Mus2 SINE Alu -1 146 1 7 752 29 0 0 0 chr13 21973353 21973382 -98310930 + AT_rich Low_complexity Low_complexity 1 29 0 7 752 236 229 41 41 chr13 21973739 21973812 -98310500 - B1_Mus2 SINE Alu -21 99 27 7 752 668 0 0 0 chr13 21973901 21973975 -98310337 - tRNA-Ile-ATT tRNA tRNA -3 74 1 7 752 377 106 0 108 chr13 21974557 21974631 -98309681 + L1_Mus3 LINE L1 6561 6626 -12 7 752 682 0 0 0 chr13 21974753 21974826 -98309486 - tRNA-Phe-TTY tRNA tRNA -3 73 1 7 752 180 152 0 0 chr13 21974901 21974934 -98309378 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 7 752 243 0 0 0 chr13 21975417 21975444 -98308868 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 752 450 0 0 0 chr13 21976054 21976104 -98308208 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 752 1766 209 277 32 chr13 21976104 21976852 -98307460 + Lx9 LINE L1 6467 7397 -247 7 752 39 22 0 0 chr13 21976852 21976898 -98307414 + AT_rich Low_complexity Low_complexity 1 46 0 7 752 21 36 0 0 chr13 21976910 21976938 -98307374 + AT_rich Low_complexity Low_complexity 1 28 0 7 752 207 0 0 0 chr13 21977457 21977480 -98306832 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 7 752 251 317 47 19 chr13 21977480 21977586 -98306726 - ID_B1 SINE B4 -14 210 102 7 752 414 185 0 0 chr13 21978045 21978126 -98306186 + CT-rich Low_complexity Low_complexity 3 83 0 7 752 342 330 17 17 chr13 21978170 21978290 -98306022 - PB1D7 SINE Alu 0 120 1 7 752 389 272 109 46 chr13 21978447 21978566 -98305746 + RMER10A LTR ERVL 121 241 -201 7 752 234 0 0 0 chr13 21978566 21978592 -98305720 + (TGG)n Simple_repeat Simple_repeat 3 28 0 7 752 389 272 109 46 chr13 21978592 21978757 -98305555 + RMER10A LTR ERVL 242 423 -19 7 752 312 27 0 0 chr13 21978758 21978795 -98305517 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 7 752 257 254 16 0 chr13 21978863 21978926 -98305386 - PB1D10 SINE Alu -43 74 11 7 752 1145 110 40 11 chr13 21978975 21979150 -98305162 + B2_Mm2 SINE B2 2 181 -14 7 752 2531 55 0 9 chr13 21979161 21979476 -98304836 - L1_Mus1 LINE L1 0 6567 6256 7 752 521 215 182 0 chr13 21979687 21979808 -98304504 + B1_Mur2 SINE Alu 2 144 -5 7 752 489 34 0 0 chr13 21979956 21980015 -98304297 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 752 351 277 58 19 chr13 21980026 21980129 -98304183 - PB1D10 SINE Alu -8 109 3 7 752 241 299 0 15 chr13 21980069 21980137 -98304175 - B4A SINE B4 -145 147 81 7 752 4739 68 2 7 chr13 21980301 21980891 -98303421 + LTRIS_Mus LTR ERV1 1 587 0 7 752 271 295 53 79 chr13 21981043 21981157 -98303155 + MTEa LTR MaLR 26 136 -243 7 752 2326 98 90 10 chr13 21981157 21981562 -98302750 + RMER16 LTR ERVK 1 480 -53 7 752 273 109 0 0 chr13 21981563 21981609 -98302703 + (T)n Simple_repeat Simple_repeat 1 46 0 7 752 905 42 0 0 chr13 21981611 21981731 -98302581 - B1_Mm SINE Alu 0 147 28 7 752 359 98 0 0 chr13 21981730 21981781 -98302531 + RMER16 LTR ERVK 483 533 0 7 752 523 274 34 119 chr13 21981781 21982050 -98302262 + MTEa LTR MaLR 131 376 -3 7 752 653 267 112 40 chr13 21982125 21982402 -98301910 + ERVL-E-int LTR ERVL 2909 3205 -2556 7 752 379 186 0 14 chr13 21982483 21982554 -98301758 - MTE2b LTR MaLR -309 70 1 7 752 3214 40 0 0 chr13 21982561 21982938 -98301374 + L1Md_F2 LINE L1 5210 5586 -297 7 752 8015 45 14 6 chr13 21982938 21983926 -98300386 + L1Md_F2 LINE L1 5587 6582 0 7 752 646 253 18 18 chr13 21983973 21984138 -98300174 + ERVL-E-int LTR ERVL 3555 3719 -1995 7 752 878 102 44 0 chr13 21984169 21984306 -98300006 + B2_Mm2 SINE B2 1 143 -52 7 752 464 259 37 9 chr13 21984321 21984430 -98299882 + ERVL-E-int LTR ERVL 3786 3897 -1817 7 752 622 246 105 35 chr13 21984551 21984808 -98299504 - RLTR18B LTR ERVK -44 468 194 7 752 567 350 25 54 chr13 21984863 21985177 -98299135 - RLTR18 LTR ERVK -306 310 6 8 752 1855 317 93 47 chr13 21985180 21985297 -98299015 + ERVL-E-int LTR ERVL 3972 4073 -1594 7 752 747 173 67 15 chr13 21985297 21985432 -98298880 - B1_Mur1 SINE Alu -6 143 2 8 752 1855 317 93 47 chr13 21985432 21986364 -98297948 + ERVL-E-int LTR ERVL 4074 5070 -597 7 752 740 244 24 0 chr13 21986527 21986691 -98297621 + B3 SINE B2 39 206 -10 8 752 727 107 48 24 chr13 21986734 21986859 -98297453 + B1_Mur4 SINE Alu 23 150 0 8 752 723 53 0 0 chr13 21986888 21986968 -98297344 + (TTC)n Simple_repeat Simple_repeat 1 80 0 8 752 1368 67 0 0 chr13 21986968 21987148 -98297164 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 8 752 723 53 0 0 chr13 21987148 21987161 -98297151 + (TTC)n Simple_repeat Simple_repeat 3 15 0 8 752 512 161 24 109 chr13 21987163 21987373 -98296939 - RMER17C LTR ERVK -135 275 84 8 752 677 184 22 7 chr13 21987371 21987508 -98296804 + B1_Mur2 SINE Alu 11 149 0 8 752 353 198 98 10 chr13 21987511 21987613 -98296699 + ERVL-E-int LTR ERVL 5367 5477 -280 7 752 493 256 7 0 chr13 21988150 21988287 -98296025 + ERVL-E-int LTR ERVL 5618 5755 -2 7 752 416 188 10 19 chr13 21988306 21988409 -98295903 - B1F SINE Alu -21 128 27 8 752 535 0 0 213 chr13 21988806 21988900 -98295412 - tRNA-Ile-ATA tRNA tRNA -3 74 1 8 752 810 0 0 0 chr13 21989554 21989644 -98294668 + (CTTTG)n Simple_repeat Simple_repeat 4 93 0 8 752 273 203 179 51 chr13 21989946 21990024 -98294288 - ID_B1 SINE B4 -8 216 129 8 752 727 245 147 11 chr13 21990485 21990675 -98293637 + B3 SINE B2 1 216 0 8 752 28 48 0 0 chr13 21990681 21990723 -98293589 + AT_rich Low_complexity Low_complexity 1 42 0 8 752 358 239 0 14 chr13 21990997 21991069 -98293243 - ID4_ SINE ID -10 73 3 8 752 594 243 22 0 chr13 21991092 21991228 -98293084 - B1_Mur1 SINE Alu -7 142 4 8 752 2704 167 37 0 chr13 21991228 21991714 -98292598 + RLTR19C LTR ERVK 3 506 0 8 752 25 51 0 0 chr13 21991736 21991775 -98292537 + AT_rich Low_complexity Low_complexity 1 39 0 8 752 317 228 37 37 chr13 21991869 21991951 -98292361 - 4.5SRNA scRNA scRNA -2 92 11 8 752 901 183 113 164 chr13 21991951 21992304 -98292008 - ORR1D1 LTR MaLR 0 384 50 8 752 412 234 207 0 chr13 21992677 21992788 -98291524 - RSINE1 SINE B4 -28 137 4 8 752 4597 56 9 2 chr13 21992818 21993374 -98290938 - LTRIS2 LTR ERV1 0 564 5 8 752 369 0 0 0 chr13 21993514 21993555 -98290757 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 752 202 89 67 0 chr13 21993845 21993890 -98290422 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 8 752 356 174 124 34 chr13 21994294 21994383 -98289929 - RMER10A LTR ERVL -28 414 318 8 752 1486 66 0 6 chr13 21995947 21996130 -98288182 - B2_Mm2 SINE B2 -12 183 2 8 752 321 250 68 0 chr13 21996795 21996883 -98287429 + PB1D7 SINE Alu 26 119 -1 8 752 217 35 0 0 chr13 21996889 21996918 -98287394 + B1_Mur4 SINE Alu 1 29 -121 8 752 612 101 0 0 chr13 21996918 21997007 -98287305 + (GGAA)n Simple_repeat Simple_repeat 1 89 0 8 752 243 268 0 0 chr13 21997994 21998050 -98286262 + B1F SINE Alu 24 79 -70 8 752 426 180 297 0 chr13 21998107 21998218 -98286094 + B1_Mus1 SINE Alu 3 146 -2 8 752 251 253 299 0 chr13 21998224 21998311 -98286001 + PB1 SINE Alu 13 125 -2 8 752 245 237 104 13 chr13 21998363 21998440 -98285872 + ID_B1 SINE B4 120 203 -21 8 752 234 0 0 0 chr13 21998440 21998466 -98285846 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 752 223 270 175 0 chr13 21998482 21998545 -98285767 + ID2 SINE ID 9 82 -1 8 752 640 14 0 0 chr13 21998979 21999051 -98285261 + tRNA-Met-i tRNA tRNA 1 72 -3 8 752 665 14 0 0 chr13 21999808 21999881 -98284431 + tRNA-Lys-AAA tRNA tRNA 1 73 -3 8 752 44 35 0 0 chr13 22000026 22000084 -98284228 + AT_rich Low_complexity Low_complexity 1 58 0 1 752 233 178 67 0 chr13 22000450 22000495 -98283817 + B1F SINE Alu 95 142 -7 2 752 393 269 108 27 chr13 22000724 22000835 -98283477 + PB1D7 SINE Alu 1 120 0 3 752 315 0 0 0 chr13 22001099 22001134 -98283178 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 752 293 264 66 0 chr13 22001139 22001230 -98283082 - ID_B1 SINE B4 0 224 128 5 752 476 182 0 22 chr13 22001497 22001587 -98282725 - RLTR33 LTR ERVK -415 263 176 6 752 616 153 131 44 chr13 22002166 22002303 -98282009 + B1_Mur2 SINE Alu 1 149 0 7 752 266 327 0 26 chr13 22002331 22002444 -98281868 - L1M5 LINE L1 -1545 4601 4492 8 752 180 111 0 0 chr13 22002644 22002671 -98281641 + (T)n Simple_repeat Simple_repeat 1 27 0 9 752 538 203 139 8 chr13 22002734 22002863 -98281449 - B1_Mur1 SINE Alu -1 148 3 1 752 221 164 27 27 chr13 22003055 22003130 -98281182 + GA-rich Low_complexity Low_complexity 1 75 0 1 752 681 14 0 0 chr13 22003181 22003255 -98281057 + tRNA-Asp-GAY tRNA tRNA 1 74 -1 1 752 404 272 226 32 chr13 22003549 22003739 -98280573 - Lx7 LINE L1 -388 7308 7082 1 752 244 322 0 0 chr13 22004129 22004188 -98280124 - tRNA-Lys-AAA tRNA tRNA 0 76 18 1 752 1374 138 32 9 chr13 22004969 22005189 -98279123 - URR1A DNA MER1_type 0 226 2 1 752 474 358 7 22 chr13 22005288 22005425 -98278887 + RSINE1 SINE B4 1 135 -30 1 752 596 12 0 215 chr13 22006706 22006813 -98277499 + tRNA-Leu-TTG tRNA tRNA 1 84 -2 1 752 270 0 0 0 chr13 22007161 22007191 -98277121 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 752 317 279 0 0 chr13 22007398 22007477 -98276835 + ID4 SINE ID 2 80 -3 1 752 204 40 0 0 chr13 22008832 22008857 -98275455 + (TATAA)n Simple_repeat Simple_repeat 5 29 0 2 752 602 0 0 151 chr13 22009030 22009116 -98275196 - tRNA-Arg-AGA tRNA tRNA -3 73 1 2 752 456 278 0 50 chr13 22009316 22009437 -98274875 + PB1D10 SINE Alu 3 117 0 2 752 213 146 0 24 chr13 22009437 22009479 -98274833 + A-rich Low_complexity Low_complexity 5 45 0 2 752 180 268 0 82 chr13 22009490 22009551 -98274761 - L3 LINE CR1 -1599 2890 2835 2 752 465 19 0 0 chr13 22009615 22009669 -98274643 + (TTTC)n Simple_repeat Simple_repeat 3 56 0 2 752 432 0 0 0 chr13 22009792 22009840 -98274472 + (TGG)n Simple_repeat Simple_repeat 1 48 0 2 752 216 0 0 0 chr13 22010390 22010414 -98273898 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 752 807 12 0 0 chr13 22011083 22011168 -98273144 + tRNA-Ser-TCY tRNA tRNA 1 85 0 2 752 186 171 0 0 chr13 22011468 22011509 -98272803 + GA-rich Low_complexity Low_complexity 2 42 0 2 752 697 101 9 32 chr13 22011701 22011817 -98272495 - B1_Mus1 SINE Alu 0 120 2 3 752 285 29 0 0 chr13 22011822 22011856 -98272456 + (T)n Simple_repeat Simple_repeat 1 34 0 3 752 329 293 66 22 chr13 22011862 22011998 -98272314 + ID_B1 SINE B4 80 221 -3 3 752 624 56 0 0 chr13 22012068 22012140 -98272172 + tRNA-Gln-CAG tRNA tRNA 1 72 -3 3 752 1070 73 73 0 chr13 22012766 22012902 -98271410 + B1_Mm SINE Alu 2 147 0 3 752 328 279 28 28 chr13 22013372 22013479 -98270833 - ID_B1 SINE B4 -31 193 87 3 752 222 217 0 21 chr13 22013938 22013985 -98270327 + B1_Mus2 SINE Alu 10 55 -92 3 752 582 86 0 0 chr13 22014012 22014093 -98270219 + (GGA)n Simple_repeat Simple_repeat 3 83 0 3 752 888 118 0 0 chr13 22014093 22014229 -98270083 + (GAAA)n Simple_repeat Simple_repeat 4 139 0 3 752 537 250 15 68 chr13 22014606 22014739 -98269573 - B1F SINE Alu -15 134 9 3 752 257 189 75 0 chr13 22015358 22015411 -98268901 - RMER15 LTR ERVL 0 575 519 4 752 898 260 114 25 chr13 22015401 22015717 -98268595 - RMER15 LTR ERVL -205 370 27 4 752 229 263 12 50 chr13 22015983 22016063 -98268249 + ID_B1 SINE B4 81 157 -67 4 752 355 188 0 14 chr13 22015994 22016063 -98268249 + B1F2 SINE Alu 12 79 -70 4 752 327 297 0 0 chr13 22016063 22016137 -98268175 + BC1_Mm scRNA scRNA 3 76 -76 4 752 290 279 14 14 chr13 22016075 22016144 -98268168 + ID SINE ID 15 83 -141 4 752 788 0 0 0 chr13 22016803 22016885 -98267427 - tRNA-Ser-TCA_ tRNA tRNA -3 82 1 4 752 243 0 0 0 chr13 22017692 22017719 -98266593 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 752 245 250 43 14 chr13 22017734 22017803 -98266509 - ID_B1 SINE B4 -8 216 146 4 752 492 319 18 60 chr13 22017802 22017969 -98266343 - B3A SINE B2 -38 160 1 4 752 341 198 9 0 chr13 22018083 22018189 -98266123 + (TG)n Simple_repeat Simple_repeat 1 107 0 4 752 307 215 31 0 chr13 22018413 22018478 -98265834 + ID4 SINE ID 1 67 -16 5 752 249 83 0 0 chr13 22019604 22019640 -98264672 + (GGGA)n Simple_repeat Simple_repeat 2 37 0 5 752 788 0 0 0 chr13 22019725 22019807 -98264505 + tRNA-Ser-TCY tRNA tRNA 1 82 -3 5 11 241 320 36 80 chr13 22020027 22020139 -98264173 - PB1D7 SINE Alu -2 118 12 5 753 225 312 156 23 chr13 22020139 22020155 -98264157 - ID_B1 SINE B4 0 224 80 5 753 340 210 61 27 chr13 22020354 22020501 -98263811 + RMER17B LTR ERVK 306 457 -501 5 753 635 205 188 24 chr13 22020559 22020729 -98263583 - B3 SINE B2 -18 198 1 5 753 343 209 86 151 chr13 22020865 22021017 -98263295 - B1F2 SINE Alu -1 148 7 5 753 249 215 9 147 chr13 22021190 22021286 -98263026 + ID_B1 SINE B4 122 204 -20 5 753 249 57 0 0 chr13 22021286 22021321 -98262991 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 5 753 249 215 9 147 chr13 22021321 22021333 -98262979 + ID_B1 SINE B4 205 215 -9 5 753 309 319 63 35 chr13 22021421 22021564 -98262748 + B1F1 SINE Alu 3 149 0 6 753 345 304 0 0 chr13 22021567 22021646 -98262666 + ID2 SINE ID 2 80 -3 6 753 405 115 0 0 chr13 22021962 22022040 -98262272 + (T)n Simple_repeat Simple_repeat 1 78 0 6 753 217 272 53 88 chr13 22022736 22022849 -98261463 + PB1D10 SINE Alu 8 116 -1 6 753 692 0 0 0 chr13 22023036 22023109 -98261203 - tRNA-Met-i tRNA tRNA -2 73 1 6 753 216 0 0 0 chr13 22023159 22023183 -98261129 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 753 300 210 59 47 chr13 22023618 22023703 -98260609 + PB1D7 SINE Alu 34 119 -1 6 753 1053 75 75 0 chr13 22023794 22023927 -98260385 + B1_Mm SINE Alu 5 147 0 6 753 315 0 0 0 chr13 22024219 22024254 -98260058 + (TTCC)n Simple_repeat Simple_repeat 4 38 0 6 753 21 36 0 0 chr13 22024657 22024685 -98259627 + AT_rich Low_complexity Low_complexity 1 28 0 6 753 2073 144 48 3 chr13 22024971 22025327 -98258985 + RLTR33 LTR ERVK 1 372 -306 7 753 413 294 29 6 chr13 22025459 22025630 -98258682 + L1MA4 LINE L1 5730 5904 -396 7 753 667 28 0 0 chr13 22025829 22025901 -98258411 - tRNA-Gln-CAG tRNA tRNA -3 72 1 7 753 215 258 273 0 chr13 22026366 22026432 -98257880 + PB1D10 SINE Alu 3 86 -31 7 753 307 214 172 40 chr13 22026507 22026658 -98257654 - L1M5 LINE L1 -741 5432 5262 7 753 357 133 0 0 chr13 22027215 22027290 -98257022 + (T)n Simple_repeat Simple_repeat 1 75 0 7 753 676 0 0 0 chr13 22027365 22027437 -98256875 - tRNA-Asp-GAY tRNA tRNA -3 72 1 7 753 207 0 0 0 chr13 22027790 22027813 -98256499 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 7 753 379 296 9 27 chr13 22027875 22027986 -98256326 + PB1D10 SINE Alu 1 109 -8 7 753 213 39 0 0 chr13 22028030 22028056 -98256256 + (T)n Simple_repeat Simple_repeat 1 26 0 7 753 369 286 71 97 chr13 22028113 22028268 -98256044 - B3A SINE B2 0 198 48 8 753 402 298 39 24 chr13 22028301 22028320 -98255992 + B4 SINE B4 69 89 -203 8 753 626 225 0 9 chr13 22028320 22028432 -98255880 + B1_Mur1 SINE Alu 2 112 -37 8 753 776 12 0 0 chr13 22028962 22029044 -98255268 - tRNA-Ser-TCY tRNA tRNA -3 82 1 8 753 3412 101 33 2 chr13 22029440 22029927 -98254385 + MurERV4_19-int LTR ERVK 2050 2551 -3229 8 753 1389 95 89 57 chr13 22029922 22030352 -98253960 + MurERV4_19-int LTR ERVK 5218 5780 0 8 753 2569 187 25 120 chr13 22030352 22031021 -98253291 + RMER19C LTR ERVK 1 606 -5 8 753 434 273 24 32 chr13 22031085 22031210 -98253102 - B1_Mur1 SINE Alu -21 128 5 8 753 324 344 116 8 chr13 22031245 22031374 -98252938 + RSINE1 SINE B4 3 145 -20 8 753 555 246 184 45 chr13 22031469 22031911 -98252401 - L1MC4 LINE L1 -53 7989 7457 8 753 676 0 0 0 chr13 22032187 22032259 -98252053 - tRNA-Asp-GAY tRNA tRNA -3 72 1 8 753 788 0 0 0 chr13 22032782 22032864 -98251448 - tRNA-Ser-TCY tRNA tRNA -3 82 1 8 753 329 254 79 18 chr13 22033142 22033260 -98251052 + B1F SINE Alu 2 116 -1 9 753 35 24 0 0 chr13 22033323 22033365 -98250947 + AT_rich Low_complexity Low_complexity 1 42 0 9 753 576 259 71 15 chr13 22033479 22033675 -98250637 - MLT1-int LTR MaLR -902 469 263 9 753 946 248 165 34 chr13 22033697 22034201 -98250111 - L1MC2 LINE L1 -30 6314 5745 9 753 734 62 17 4 chr13 22034250 22034348 -98249964 + B1_Mm SINE Alu 1 137 -10 9 753 608 278 69 31 chr13 22034384 22034703 -98249609 - L1MC2 LINE L1 -702 5631 5301 9 753 2495 131 64 127 chr13 22034861 22035358 -98248954 - RMER4A LTR ERVK 0 466 1 9 753 1263 127 17 0 chr13 22035539 22035720 -98248592 - B2_Mm1t SINE B2 -9 184 1 9 753 427 293 37 8 chr13 22035728 22035862 -98248450 - MLT1-int LTR MaLR -1233 138 1 9 753 369 232 12 0 chr13 22036550 22036632 -98247680 + ID_B1 SINE B4 118 200 -24 9 753 332 282 0 0 chr13 22038444 22038515 -98245797 - PB1D9 SINE Alu -49 71 1 9 753 273 29 0 0 chr13 22038655 22038689 -98245623 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 9 753 298 61 0 39 chr13 22039144 22039195 -98245117 + (GGA)n Simple_repeat Simple_repeat 1 49 0 1 753 876 238 145 21 chr13 22039733 22040016 -98244296 - MER2 DNA MER2_type -2 343 26 1 753 308 318 25 37 chr13 22040096 22040259 -98244053 - L1M4 LINE L1 -3346 2800 2640 1 753 245 204 82 0 chr13 22040331 22040380 -98243932 + B1_Mus1 SINE Alu 1 53 -95 1 753 1118 106 0 0 chr13 22040588 22040729 -98243583 - B1_Mus1 SINE Alu -5 143 3 1 753 240 164 78 47 chr13 22040821 22040885 -98243427 - MurSatRep1 Unknown Unknown -1842 295 230 1 753 569 138 0 41 chr13 22040931 22041029 -98243283 + B1_Mus2 SINE Alu 42 135 -12 1 753 261 217 174 0 chr13 22041281 22041350 -98242962 - ID4_ SINE ID 0 83 3 1 753 475 310 0 0 chr13 22041518 22041660 -98242652 + MurSatRep1 Unknown Unknown 603 744 -1393 1 753 307 39 0 55 chr13 22042659 22042714 -98241598 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 1 753 479 221 141 0 chr13 22042782 22042910 -98241402 + Lx7 LINE L1 5698 5842 -458 1 753 1462 254 40 51 chr13 22042921 22043452 -98240860 - L1M4c LINE L1 -2164 4215 3691 1 753 222 143 0 0 chr13 22043468 22043492 -98240820 + (T)n Simple_repeat Simple_repeat 1 24 0 1 753 1250 54 0 0 chr13 22043492 22043639 -98240673 - B1_Mus1 SINE Alu 0 148 2 1 753 222 143 0 0 chr13 22043639 22043656 -98240656 + (T)n Simple_repeat Simple_repeat 1 17 0 1 753 315 0 0 0 chr13 22043697 22043732 -98240580 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 753 1109 315 94 24 chr13 22043760 22044440 -98239872 - L1M4c LINE L1 -3114 3265 2538 1 753 455 253 57 26 chr13 22044522 22044770 -98239542 - L1M4c LINE L1 -3830 2549 2272 1 753 4693 16 0 0 chr13 22045645 22046137 -98238175 - MT2_Mm LTR ERVL 0 493 2 1 753 965 156 0 0 chr13 22046137 22046272 -98238040 - B1_Mus1 SINE Alu -13 135 1 1 753 650 232 120 31 chr13 22046284 22046475 -98237837 - B3 SINE B2 0 216 9 1 753 526 250 27 0 chr13 22046476 22046588 -98237724 - B3 SINE B2 -101 115 1 1 753 305 262 93 79 chr13 22046628 22046720 -98237592 - L1_Mur3 LINE L1 -4078 1802 1710 1 753 1144 82 107 34 chr13 22046720 22046897 -98237415 - B2_Mm2 SINE B2 -4 191 2 1 753 305 262 93 79 chr13 22046897 22047094 -98237218 - L1_Mur3 LINE L1 -4171 1709 1509 1 753 384 22 0 0 chr13 22047279 22047324 -98236988 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 753 755 243 47 36 chr13 22047356 22047548 -98236764 - B3 SINE B2 -22 194 1 1 753 1431 91 11 0 chr13 22047932 22048119 -98236193 - B2_Mm1t SINE B2 -1 192 4 1 753 504 267 35 35 chr13 22050585 22051772 -98232540 + MMSAT4 Satellite Satellite 1 1187 0 1 753 626 204 12 12 chr13 22051824 22052027 -98232285 + MMSAT4 Satellite Satellite 1 203 0 1 753 216 0 0 0 chr13 22052510 22052534 -98231778 + (T)n Simple_repeat Simple_repeat 1 24 0 1 753 790 173 21 41 chr13 22053329 22053474 -98230838 - B1_Mur2 SINE Alu -7 142 1 1 753 279 210 48 16 chr13 22053790 22053853 -98230459 - U6 snRNA snRNA -38 69 5 1 753 552 174 0 11 chr13 22054106 22054199 -98230113 + B1_Mus1 SINE Alu 1 92 -56 1 753 594 228 23 39 chr13 22054387 22054515 -98229797 + B3 SINE B2 1 126 -90 1 753 297 277 283 20 chr13 22055075 22055322 -98228990 - MLT1D LTR MaLR -50 455 144 1 753 208 24 0 128 chr13 22055324 22055371 -98228941 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 753 273 326 109 52 chr13 22055621 22055663 -98228649 + MER34 LTR ERV1 300 341 -201 1 753 1219 169 312 11 chr13 22055663 22055945 -98228367 - ORR1B2 LTR MaLR 0 367 1 1 753 273 326 109 52 chr13 22055945 22056132 -98228180 + MER34 LTR ERV1 342 542 0 1 753 1368 269 33 13 chr13 22056263 22056659 -98227653 - Lx9 LINE L1 -169 7475 7072 1 753 1493 235 34 23 chr13 22056768 22057047 -98227265 - RLTR18B LTR ERVK -4 508 220 1 753 2813 168 26 91 chr13 22057047 22057650 -98226662 + RLTR12A LTR ERVK 1 564 -4 1 753 1493 235 34 23 chr13 22057650 22057754 -98226558 - RLTR18B LTR ERVK -293 219 121 1 753 594 253 111 12 chr13 22057842 22058014 -98226298 - RLTR18B LTR ERVK -315 197 9 1 753 373 249 2 73 chr13 22058199 22058340 -98225972 - B1_Mus1 SINE Alu -16 132 1 1 753 681 306 30 0 chr13 22058347 22058546 -98225766 - B3 SINE B2 -11 205 1 1 753 342 205 96 33 chr13 22058646 22058786 -98225526 + PB1D9 SINE Alu 3 146 -1 1 753 1221 141 0 48 chr13 22058843 22059074 -98225238 + RLTR28 LTR ERVL 22 241 -283 1 753 360 64 0 0 chr13 22059094 22059141 -98225171 + (GAAAA)n Simple_repeat Simple_repeat 3 49 0 1 753 2546 201 154 17 chr13 22059142 22059323 -98224989 + L1_Mm LINE L1 3578 3765 -2118 1 753 3221 41 40 13 chr13 22059323 22059719 -98224593 - MTB_Mm LTR MaLR 0 407 1 1 753 2546 201 154 17 chr13 22059719 22060185 -98224127 + L1_Mm LINE L1 3766 4314 -1569 1 753 455 273 59 42 chr13 22060235 22060472 -98223840 - MER33 DNA MER1_type -13 311 71 1 753 397 169 0 0 chr13 22060638 22060709 -98223603 - PB1D9 SINE Alu -45 75 5 1 753 416 263 0 92 chr13 22060652 22060781 -98223531 - B4 SINE B4 -146 146 30 1 753 4840 139 66 119 chr13 22060781 22061946 -98222366 + RLTR25A LTR ERVK 1 1103 0 1 753 227 283 0 0 chr13 22061946 22062005 -98222307 - B4A SINE B4 -232 60 2 1 753 351 248 114 27 chr13 22062446 22062595 -98221717 + RMER15 LTR ERVL 403 564 -11 1 753 180 0 0 0 chr13 22062931 22062951 -98221361 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 753 636 54 0 0 chr13 22063656 22063730 -98220582 + tRNA-Lys-AAA tRNA tRNA 1 74 -2 1 753 1042 210 53 10 chr13 22064321 22064528 -98219784 - B3 SINE B2 0 216 1 1 753 2477 70 75 3 chr13 22064595 22064967 -98219345 + MTB_Mm LTR MaLR 1 399 -8 1 753 1554 194 53 17 chr13 22065016 22065372 -98218940 + ORR1D1 LTR MaLR 1 369 -5 1 753 1044 77 0 78 chr13 22065442 22065596 -98218716 + B1_Mus1 SINE Alu 2 143 -5 1 753 207 204 0 0 chr13 22065765 22065809 -98218503 + A-rich Low_complexity Low_complexity 1 44 0 1 753 233 109 22 0 chr13 22066323 22066369 -98217943 + (TAAAA)n Simple_repeat Simple_repeat 2 48 0 1 753 651 0 0 0 chr13 22066900 22066972 -98217340 + tRNA-Met-i tRNA tRNA 1 72 -3 1 753 326 0 0 64 chr13 22067164 22067211 -98217101 + (TATG)n Simple_repeat Simple_repeat 3 46 0 1 753 182 91 30 0 chr13 22067355 22067388 -98216924 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 753 2563 47 0 3 chr13 22067427 22067766 -98216546 + ORR1A0 LTR MaLR 1 338 -8 1 753 183 80 0 0 chr13 22067793 22067818 -98216494 + (A)n Simple_repeat Simple_repeat 1 25 0 1 753 495 264 33 40 chr13 22068664 22068814 -98215498 + B1_Mur1 SINE Alu 1 149 0 1 753 396 181 27 14 chr13 22069191 22069264 -98215048 + Lx5 LINE L1 6881 6954 -96 1 753 378 0 0 0 chr13 22069311 22069353 -98214959 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 1 753 215 114 0 83 chr13 22069626 22069674 -98214638 + A-rich Low_complexity Low_complexity 5 48 0 1 753 259 172 23 273 chr13 22070038 22070214 -98214098 - RLTR21 LTR ERVK -4 1568 1437 1 753 1062 188 58 12 chr13 22070236 22070494 -98213818 - RMER12B LTR ERVK -181 1223 954 1 753 2938 189 97 27 chr13 22070493 22071234 -98213078 - RMER12B LTR ERVK -611 793 1 1 753 207 0 0 0 chr13 22071500 22071523 -98212789 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 753 952 112 20 34 chr13 22071704 22071852 -98212460 + B1_Mur4 SINE Alu 5 150 0 1 753 204 64 20 41 chr13 22071864 22071913 -98212399 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 1 753 312 286 0 12 chr13 22072455 22072467 -98211845 - RSINE1 SINE B4 -5 160 149 1 753 360 0 0 0 chr13 22072467 22072507 -98211805 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 753 312 286 0 12 chr13 22072507 22072579 -98211733 - RSINE1 SINE B4 -17 148 77 1 753 448 284 34 54 chr13 22078105 22078254 -98206058 - RSINE1 SINE B4 -4 161 16 1 753 572 269 31 19 chr13 22078905 22079064 -98205248 + ID_B1 SINE B4 2 162 -62 1 753 198 0 0 0 chr13 22079091 22079113 -98205199 + (GAAA)n Simple_repeat Simple_repeat 3 24 0 1 753 836 142 11 17 chr13 22079115 22079294 -98205018 + GA-rich Low_complexity Low_complexity 3 180 0 1 753 447 215 21 0 chr13 22079688 22079781 -98204531 + RSINE1 SINE B4 4 98 -67 1 753 334 169 120 33 chr13 22079786 22079878 -98204434 + PB1D9 SINE Alu 6 105 -15 1 753 721 121 16 0 chr13 22079878 22080002 -98204310 + (GA)n Simple_repeat Simple_repeat 1 126 0 1 753 390 21 0 0 chr13 22080729 22080776 -98203536 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 1 753 757 199 15 0 chr13 22080886 22081022 -98203290 + B1_Mur3 SINE Alu 5 142 -7 1 753 271 228 20 10 chr13 22081379 22081481 -98202831 + MER33 DNA MER1_type 164 266 -58 1 753 306 320 29 0 chr13 22082163 22082266 -98202046 + RLTR42-int LTR ERVK 1669 1774 -3748 1 753 274 232 106 35 chr13 22082280 22082365 -98201947 + RLTR42-int LTR ERVK 1695 1785 -3737 1 753 2393 157 46 147 chr13 22082706 22083320 -98200992 - RMER19C LTR ERVK 0 611 60 1 753 616 288 79 17 chr13 22083356 22083596 -98200716 - Lx8 LINE L1 -271 7202 6948 1 753 240 279 15 0 chr13 22083604 22083672 -98200640 + RMER1C Other Other 1260 1328 -14 1 753 200 111 22 0 chr13 22084080 22084125 -98200187 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 1 753 363 188 57 5 chr13 22084466 22084583 -98199729 + L1VL2 LINE L1 280 400 -5935 1 753 270 0 0 0 chr13 22084588 22084618 -98199694 + (A)n Simple_repeat Simple_repeat 1 30 0 1 753 3738 130 10 26 chr13 22084618 22085241 -98199071 + Lx2B LINE L1 6386 6998 -2 1 753 196 236 0 22 chr13 22085277 22085368 -98198944 + (TA)n Simple_repeat Simple_repeat 2 90 0 1 753 702 48 0 0 chr13 22086056 22086140 -98198172 - tRNA-Ser-AGY tRNA tRNA -1 84 1 1 753 246 32 0 0 chr13 22086557 22086588 -98197724 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 753 198 0 51 51 chr13 22087203 22087242 -98197070 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 753 317 289 33 11 chr13 22087827 22087918 -98196394 + PB1D10 SINE Alu 20 112 -5 1 753 211 258 0 16 chr13 22087931 22087994 -98196318 + (CCAA)n Simple_repeat Simple_repeat 2 63 0 1 753 279 284 27 0 chr13 22087996 22088070 -98196242 + PB1D7 SINE Alu 24 99 -21 2 753 519 83 0 0 chr13 22088449 22088521 -98195791 - tRNA-Gln-CAG tRNA tRNA -3 72 1 2 753 218 289 0 0 chr13 22088656 22088708 -98195604 - PB1D7 SINE Alu -26 94 43 2 753 207 105 53 0 chr13 22088932 22088989 -98195323 + (CTCA)n Simple_repeat Simple_repeat 1 60 0 2 753 198 0 0 0 chr13 22090452 22090474 -98193838 + (A)n Simple_repeat Simple_repeat 1 22 0 2 753 381 132 59 0 chr13 22090621 22090689 -98193623 + tRNA-Arg-CGY_ tRNA tRNA 1 72 -4 2 753 231 114 0 0 chr13 22091925 22091969 -98192343 + (T)n Simple_repeat Simple_repeat 1 44 0 2 753 293 224 120 56 chr13 22092423 22092565 -98191747 + L1MC4 LINE L1 1722 1872 -4343 2 753 597 242 67 26 chr13 22092896 22093091 -98191221 + RMER20B LTR ERVK 128 330 -297 2 753 1036 274 52 25 chr13 22093865 22094232 -98190080 - MTEa LTR MaLR -2 377 1 2 753 196 374 87 24 chr13 22095285 22095537 -98188775 - L2b LINE L2 -98 3277 3010 2 753 234 339 73 73 chr13 22095629 22095807 -98188505 - L2b LINE L2 -1 3374 3197 2 753 242 260 48 15 chr13 22096003 22096116 -98188196 - MIR SINE MIR -96 166 59 2 753 522 213 9 27 chr13 22096186 22096297 -98188015 + PB1D10 SINE Alu 3 111 -6 2 753 180 195 0 24 chr13 22097722 22097764 -98186548 - MIRm SINE MIR -121 155 115 2 753 216 294 0 32 chr13 22100040 22100135 -98184177 + GA-rich Low_complexity Low_complexity 1 92 0 2 753 456 193 71 63 chr13 22101036 22101163 -98183149 - B1F SINE Alu -4 145 18 2 753 532 214 27 0 chr13 22101052 22101164 -98183148 - ID_B1 SINE B4 -12 212 98 2 753 642 241 45 65 chr13 22102299 22102499 -98181813 + ID_B1 SINE B4 8 203 -21 2 753 711 260 47 0 chr13 22102597 22102766 -98181546 - B3 SINE B2 -12 204 28 2 753 924 129 0 0 chr13 22102849 22102996 -98181316 + (TTC)n Simple_repeat Simple_repeat 1 147 0 2 753 1130 68 7 7 chr13 22103010 22103157 -98181155 - B1_Mm SINE Alu 0 147 1 2 753 346 349 96 13 chr13 22103161 22103536 -98180776 + L2 LINE L2 2601 3006 -413 2 753 772 221 34 118 chr13 22103859 22104156 -98180156 + Lx8 LINE L1 5162 5433 -447 2 753 543 286 113 31 chr13 22104162 22104515 -98179797 + Lx8 LINE L1 5741 6122 -1351 2 753 640 197 7 72 chr13 22104655 22104808 -98179504 - B1_Mur3 SINE Alu 0 149 7 2 753 771 104 0 0 chr13 22104836 22104951 -98179361 + (CA)n Simple_repeat Simple_repeat 2 116 0 2 753 211 122 0 58 chr13 22104953 22105005 -98179307 + A-rich Low_complexity Low_complexity 1 49 0 2 753 486 0 0 0 chr13 22106042 22106096 -98178216 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 753 518 248 0 9 chr13 22107240 22107354 -98176958 + B1F SINE Alu 1 113 -36 2 753 677 14 0 0 chr13 22107658 22107732 -98176580 - tRNA-Val-GTY tRNA tRNA -2 74 1 2 753 1484 48 27 0 chr13 22107781 22107967 -98176345 + B2_Mm1a SINE B2 2 192 -1 2 753 229 265 181 0 chr13 22108700 22108783 -98175529 - L1M5 LINE L1 -360 5834 5737 2 753 426 181 128 0 chr13 22108914 22109008 -98175304 - PB1D10 SINE Alu -2 115 10 2 753 303 293 20 20 chr13 22109012 22109113 -98175199 - L1M5 LINE L1 -579 5615 5515 2 753 596 262 126 11 chr13 22109240 22109414 -98174898 - B3A SINE B2 -4 194 1 2 753 224 324 14 0 chr13 22110781 22110855 -98173457 - ID_B1 SINE B4 -64 160 86 2 753 242 238 0 31 chr13 22111144 22111209 -98173103 - RLTR28B LTR ERVL -1 523 461 2 753 1000 151 169 30 chr13 22111277 22111544 -98172768 - RLTR28B LTR ERVL -177 304 1 2 753 671 0 0 0 chr13 22113012 22113085 -98171227 - tRNA-Arg-CGY_ tRNA tRNA -3 73 1 2 753 313 173 184 13 chr13 22113389 22113465 -98170847 - PB1D7 SINE Alu -20 100 12 2 753 242 299 0 15 chr13 22113416 22113484 -98170828 - B4A SINE B4 -148 144 78 2 753 224 170 0 19 chr13 22113949 22114003 -98170309 + C-rich Low_complexity Low_complexity 1 53 0 2 753 468 149 196 0 chr13 22114046 22114153 -98170159 - B1_Mus1 SINE Alu 0 148 21 2 753 706 37 0 0 chr13 22114287 22114369 -98169943 - tRNA-Ser-TCG tRNA tRNA -3 82 1 2 753 22 35 0 0 chr13 22114396 22114425 -98169887 + AT_rich Low_complexity Low_complexity 1 29 0 2 753 482 264 57 0 chr13 22115047 22115063 -98169249 + B1F1 SINE Alu 1 148 -1 2 753 658 186 0 0 chr13 22115063 22115187 -98169125 + ID_B1 SINE B4 100 223 -1 2 753 716 208 14 14 chr13 22115327 22115473 -98168839 + B1_Mm SINE Alu 1 146 -1 2 753 605 302 136 57 chr13 22115727 22116081 -98168231 - MLT1B LTR MaLR -3 387 6 2 753 494 120 22 0 chr13 22116668 22116760 -98167552 + (TATG)n Simple_repeat Simple_repeat 1 94 0 2 753 773 164 57 0 chr13 22117205 22117345 -98166967 + B1_Mus1 SINE Alu 1 148 0 2 753 920 100 12 12 chr13 22117458 22117620 -98166692 + (GGAA)n Simple_repeat Simple_repeat 3 164 0 2 753 678 0 0 0 chr13 22118416 22118489 -98165823 + tRNA-Val-GTG tRNA tRNA 1 73 -3 2 753 216 0 0 0 chr13 22119020 22119044 -98165268 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 2 753 642 241 0 0 chr13 22119044 22119177 -98165135 - B1_Mur1 SINE Alu -10 139 7 2 753 339 287 40 40 chr13 22119185 22119201 -98165111 - B1F SINE Alu 0 149 138 2 753 1131 30 0 0 chr13 22119201 22119336 -98164976 + (TCTCCC)n Simple_repeat Simple_repeat 3 137 0 2 753 339 287 40 40 chr13 22119336 22119468 -98164844 - B1F SINE Alu -12 137 1 2 753 253 43 0 0 chr13 22119514 22119561 -98164751 - L1Md_F3 LINE L1 -1 6583 6537 2 753 243 216 105 26 chr13 22119775 22119851 -98164461 - ID4_ SINE ID 0 83 2 2 753 365 292 30 15 chr13 22119976 22120108 -98164204 + MLT2B4 LTR ERVL 2 135 -421 2 753 668 0 0 0 chr13 22121091 22121165 -98163147 + tRNA-Ile-ATT tRNA tRNA 1 74 -3 2 753 605 80 0 0 chr13 22121967 22122042 -98162270 - tRNA-Thr-ACY_ tRNA tRNA -2 75 1 2 753 342 67 0 0 chr13 22122191 22122236 -98162076 + (TTTC)n Simple_repeat Simple_repeat 3 47 0 2 753 216 0 0 0 chr13 22122232 22122256 -98162056 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2 753 464 177 132 18 chr13 22122258 22122425 -98161887 - RMER17C LTR ERVK -135 275 90 2 753 225 329 12 25 chr13 22122571 22122652 -98161660 - L2a LINE L2 -50 3376 3297 2 753 261 0 0 0 chr13 22122688 22122717 -98161595 + (T)n Simple_repeat Simple_repeat 1 29 0 2 753 337 208 143 0 chr13 22122871 22122948 -98161364 - B1_Mur1 SINE Alu -1 148 61 2 753 207 0 0 0 chr13 22123455 22123478 -98160834 + (TTCC)n Simple_repeat Simple_repeat 3 25 0 2 753 606 201 14 29 chr13 22123480 22123618 -98160694 - B1_Mur3 SINE Alu 0 149 14 2 753 320 0 25 0 chr13 22123639 22123679 -98160633 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 753 33 25 0 0 chr13 22124037 22124077 -98160235 + AT_rich Low_complexity Low_complexity 1 40 0 2 753 326 262 0 48 chr13 22124127 22124211 -98160101 - ID4_ SINE ID -1 82 3 2 753 296 120 100 0 chr13 22124221 22124271 -98160041 - ORR1B1 LTR MaLR 0 378 324 2 753 225 0 0 0 chr13 22124271 22124296 -98160016 + (T)n Simple_repeat Simple_repeat 1 25 0 2 753 1307 14 0 0 chr13 22124296 22124443 -98159869 - B1_Mm SINE Alu 0 147 1 2 753 1553 142 98 3 chr13 22124443 22124760 -98159552 - ORR1B1 LTR MaLR -42 352 6 2 753 221 275 0 0 chr13 22125592 22125653 -98158659 - ID4_ SINE ID -60 92 32 2 753 369 0 0 0 chr13 22125947 22125988 -98158324 + (TC)n Simple_repeat Simple_repeat 1 41 0 2 753 544 193 32 32 chr13 22128651 22128774 -98155538 + B1_Mus2 SINE Alu 9 131 -16 2 753 867 65 186 0 chr13 22129084 22129208 -98155104 - B1_Mus1 SINE Alu 0 148 2 2 753 23 0 0 0 chr13 22129245 22129268 -98155044 + AT_rich Low_complexity Low_complexity 1 23 0 2 753 343 137 0 171 chr13 22129598 22129686 -98154626 - B1_Mur1 SINE Alu 0 149 45 2 753 893 131 66 0 chr13 22130302 22130439 -98153873 + B1_Mur4 SINE Alu 5 150 0 2 753 987 52 0 36 chr13 22131250 22131390 -98152922 - B1_Mus1 SINE Alu 0 148 14 2 753 373 265 28 37 chr13 22131572 22131680 -98152632 - PB1D9 SINE Alu 0 120 15 2 753 373 218 18 98 chr13 22132675 22132690 -98151622 + MT2B LTR ERVL 155 160 -441 2 753 639 125 42 0 chr13 22132690 22132809 -98151503 + B1_Mm SINE Alu 2 127 -20 2 753 436 173 0 0 chr13 22133673 22133748 -98150564 - B1_Mm SINE Alu -55 92 18 2 753 362 229 196 21 chr13 22136328 22136471 -98147841 + MER67A LTR ERV1 14 181 -362 2 753 2238 146 96 5 chr13 22137201 22137587 -98146725 + MTC LTR MaLR 1 421 0 2 753 356 290 137 0 chr13 22138121 22138245 -98146067 - ID_B1 SINE B4 -2 222 82 2 753 680 306 20 0 chr13 22138844 22139043 -98145269 + ID_B1 SINE B4 1 203 -21 2 753 1000 199 41 0 chr13 22139204 22139400 -98144912 + URR1A DNA MER1_type 5 208 -18 2 753 666 202 28 84 chr13 22139464 22139642 -98144670 + RLTR33 LTR ERVK 338 505 -173 2 753 642 260 77 114 chr13 22139946 22140385 -98143927 + RLTR23 LTR ERV1 8 430 0 2 753 492 331 101 77 chr13 22140388 22140764 -98143548 + MLT1F2 LTR MaLR 141 525 -35 2 753 711 118 142 0 chr13 22140838 22140965 -98143347 + B1_Mur2 SINE Alu 5 149 0 2 753 324 252 177 8 chr13 22141161 22141285 -98143027 + B1_Mm SINE Alu 2 146 -1 2 753 277 263 105 58 chr13 22141475 22141665 -98142647 - Lx8 LINE L1 -4 7469 7271 2 753 420 268 130 47 chr13 22141709 22141924 -98142388 - Lx8 LINE L1 -283 7190 6958 2 753 729 12 0 0 chr13 22142554 22142636 -98141676 - tRNA-Ser-AGY tRNA tRNA -3 82 1 2 753 275 297 77 0 chr13 22143479 22143570 -98140742 - PB1D7 SINE Alu 0 120 23 2 753 366 23 0 0 chr13 22143586 22143629 -98140683 + (TCCC)n Simple_repeat Simple_repeat 4 46 0 2 753 495 275 67 57 chr13 22143637 22143830 -98140482 - B3A SINE B2 0 198 4 3 753 23 0 0 0 chr13 22144511 22144534 -98139778 + AT_rich Low_complexity Low_complexity 1 23 0 3 753 599 49 441 0 chr13 22144605 22144707 -98139605 - B1_Mus1 SINE Alu -1 147 1 3 753 648 243 82 12 chr13 22144739 22144910 -98139402 - B4 SINE B4 -4 288 106 3 753 266 266 204 0 chr13 22144812 22144925 -98139387 - B1F2 SINE Alu -12 137 2 3 753 328 130 29 0 chr13 22144928 22144997 -98139315 + (CAA)n Simple_repeat Simple_repeat 2 72 0 3 753 338 248 23 60 chr13 22145067 22145200 -98139112 - Lx9 LINE L1 -575 7069 6942 3 753 499 45 0 0 chr13 22145205 22145271 -98139041 - B2_Mm1t SINE B2 -18 175 110 3 753 573 15 0 0 chr13 22145596 22145662 -98138650 + (CAAAC)n Simple_repeat Simple_repeat 5 70 0 3 753 1378 47 70 0 chr13 22146001 22146173 -98138139 - B2_Mm2 SINE B2 -10 185 2 3 753 239 244 92 43 chr13 22146478 22146619 -98137693 + MER67C LTR ERV1 349 496 -215 3 753 282 289 8 16 chr13 22146939 22147062 -98137250 + L1MC4 LINE L1 7704 7825 -217 3 753 635 259 119 0 chr13 22148257 22148450 -98135862 - B3 SINE B2 0 216 1 3 753 263 283 66 42 chr13 22149783 22149949 -98134363 - RLTR8 LTR ERVK -7 376 199 3 753 509 306 92 91 chr13 22150060 22150657 -98133655 - RMER16-int LTR ERVK -2 5404 4811 3 753 1226 42 0 0 chr13 22150657 22150799 -98133513 - B1_Mus2 SINE Alu -5 142 1 3 753 509 306 92 91 chr13 22150799 22151126 -98133186 - RMER16-int LTR ERVK -596 4810 4479 3 754 7991 132 41 9 chr13 22151722 22153006 -98131306 - RMER16-int LTR ERVK -1416 3990 2666 3 754 1061 194 225 31 chr13 22153442 22153767 -98130545 - MTD LTR MaLR -30 389 2 3 754 1496 143 189 3 chr13 22153831 22154175 -98130137 - RMER15 LTR ERVL -1 574 167 3 754 243 0 0 0 chr13 22154179 22154206 -98130106 + (T)n Simple_repeat Simple_repeat 1 27 0 3 754 7418 40 0 2 chr13 22154236 22155119 -98129193 - L1Md_F2 LINE L1 0 6582 5702 3 754 781 202 26 31 chr13 22155129 22155323 -98128989 - RMER15 LTR ERVL -382 193 1 3 754 218 360 0 0 chr13 22155983 22156058 -98128254 - ID4_ SINE ID -1 82 8 3 754 387 162 0 0 chr13 22156739 22156819 -98127493 + CT-rich Low_complexity Low_complexity 2 81 0 3 754 7617 172 69 62 chr13 22157130 22159027 -98125285 + MYSERV16_I-int LTR ERVK 308 2321 -5 3 754 1443 208 157 53 chr13 22159034 22159506 -98124806 + RLTR11A LTR ERVK 4 524 -4 3 754 182 250 0 0 chr13 22159857 22159897 -98124415 + L2 LINE L2 2420 2459 -960 3 754 194 327 59 59 chr13 22159991 22160160 -98124152 + L2 LINE L2 2582 2750 -669 3 754 435 211 55 49 chr13 22161108 22161237 -98123075 + B1_Mur2 SINE Alu 3 149 0 3 754 10060 93 5 7 chr13 22161641 22163126 -98121186 + MusHAL1 LINE L1 604 2085 -627 3 754 2691 177 10 0 chr13 22163197 22163288 -98121024 + Lx5 LINE L1 5350 5443 -434 3 754 186 43 0 0 chr13 22163288 22163311 -98121001 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 754 2691 177 10 0 chr13 22163311 22163704 -98120608 + Lx5 LINE L1 5444 5838 -39 3 754 1134 152 114 0 chr13 22164252 22164463 -98119849 + Lx5 LINE L1 5843 6077 -973 3 754 504 316 55 18 chr13 22164456 22164675 -98119637 + Lx7 LINE L1 7049 7275 -421 3 754 5688 70 1 10 chr13 22165466 22165881 -98118431 + RLTR22_Mus LTR ERVK 1 410 -1398 3 754 4251 63 33 9 chr13 22165881 22166427 -98117885 + LTRIS2 LTR ERV1 5 563 -1 3 754 5688 70 1 10 chr13 22166427 22166825 -98117487 + RLTR22_Mus LTR ERVK 411 807 -1001 3 754 399 315 40 66 chr13 22167096 22167324 -98116988 + RMER12 LTR ERVK 1101 1322 0 3 754 637 279 30 5 chr13 22168133 22168331 -98115981 + B3 SINE B2 2 204 -12 3 754 687 172 8 8 chr13 22171529 22171646 -98112666 - B1_Mur2 SINE Alu -32 117 1 3 754 360 288 127 0 chr13 22171646 22171764 -98112548 + MTE2a LTR MaLR 5 137 -242 3 754 299 287 24 102 chr13 22171726 22171893 -98112419 + MT2A LTR ERVL 100 253 -280 3 754 297 0 0 0 chr13 22172110 22172143 -98112169 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 3 754 461 211 11 11 chr13 22172399 22172490 -98111822 - B1_Mur2 SINE Alu 0 149 59 3 754 281 224 13 26 chr13 22172557 22172635 -98111677 + Lx9 LINE L1 7392 7468 -176 3 754 192 326 52 21 chr13 22172970 22173067 -98111245 - L2 LINE L2 -536 2883 2784 3 754 241 327 59 59 chr13 22173444 22173613 -98110699 - L2 LINE L2 -669 2750 2582 3 754 187 225 0 0 chr13 22173707 22173747 -98110565 - L2 LINE L2 -960 2459 2420 3 754 811 211 13 62 chr13 22174094 22174321 -98109991 - RLTR11A LTR ERVK 0 528 313 3 754 5498 88 55 1 chr13 22174331 22175128 -98109184 + MusHAL1 LINE L1 1689 2528 -184 3 754 1161 118 0 0 chr13 22175145 22175323 -98108989 + (TC)n Simple_repeat Simple_repeat 2 179 0 3 754 1412 32 5 0 chr13 22175656 22175845 -98108467 + MusHAL1 LINE L1 2518 2707 -5 3 754 224 309 30 20 chr13 22176781 22176880 -98107432 + PB1D10 SINE Alu 18 117 0 3 754 369 0 0 0 chr13 22177396 22177437 -98106875 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 3 754 186 273 51 68 chr13 22177499 22177617 -98106695 + L3 LINE CR1 833 948 -3541 3 754 568 152 0 0 chr13 22178807 22178899 -98105413 + B1_Mus2 SINE Alu 56 147 0 3 754 225 0 0 0 chr13 22178901 22178926 -98105386 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 754 183 42 0 0 chr13 22179277 22179301 -98105011 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 3 754 633 148 0 0 chr13 22179348 22179476 -98104836 + (GA)n Simple_repeat Simple_repeat 2 129 0 3 754 592 270 19 71 chr13 22180869 22181080 -98103232 - B3 SINE B2 -15 201 2 3 754 651 257 11 44 chr13 22181995 22182178 -98102134 - B3A SINE B2 0 198 22 3 754 444 283 149 21 chr13 22182461 22182602 -98101710 + RSINE1 SINE B4 3 161 -4 3 754 30 27 0 0 chr13 22182612 22182649 -98101663 + AT_rich Low_complexity Low_complexity 1 37 0 3 754 386 200 41 29 chr13 22183872 22183983 -98100329 + ORR1D1 LTR MaLR 51 160 -214 3 754 788 211 28 0 chr13 22184552 22184694 -98099618 + B1_Mur3 SINE Alu 3 148 -1 3 754 696 119 0 0 chr13 22184702 22184811 -98099501 + (GGAA)n Simple_repeat Simple_repeat 1 109 0 3 754 503 273 34 48 chr13 22184834 22184980 -98099332 + B1_Mur1 SINE Alu 6 149 0 3 754 229 333 19 38 chr13 22185074 22185180 -98099132 + PB1D10 SINE Alu 9 112 -5 3 754 312 27 0 0 chr13 22185382 22185419 -98098893 + (AAATG)n Simple_repeat Simple_repeat 4 40 0 3 754 302 98 20 0 chr13 22185988 22186039 -98098273 + (TTTC)n Simple_repeat Simple_repeat 4 55 0 3 754 622 210 113 0 chr13 22186039 22186163 -98098149 - B1_Mus1 SINE Alu 0 148 11 3 754 3822 100 65 20 chr13 22187287 22187828 -98096484 + RMER2 LTR ERV1 1 565 -2 3 754 2346 139 85 5 chr13 22188568 22188958 -98095354 - MTC LTR MaLR 0 421 1 3 754 574 219 15 54 chr13 22189365 22189495 -98094817 - RMER20B LTR ERVK -502 125 1 3 754 1842 232 79 5 chr13 22189855 22190271 -98094041 + Lx6 LINE L1 6838 7284 -176 3 754 204 40 0 0 chr13 22190277 22190302 -98094010 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 3 754 399 283 140 82 chr13 22190608 22191003 -98093309 + RLTR24 LTR ERV1 1 529 0 3 754 302 294 29 9 chr13 22191148 22191282 -98093030 - L1MB2 LINE L1 -320 5971 5836 3 754 539 245 140 0 chr13 22191638 22191781 -98092531 - RSINE1 SINE B4 0 165 3 3 754 530 310 11 44 chr13 22192038 22192220 -98092092 + B3A SINE B2 22 197 -1 3 754 606 282 62 22 chr13 22193173 22193351 -98090961 + B3 SINE B2 4 188 -28 3 754 225 0 0 0 chr13 22193352 22193377 -98090935 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 754 21 0 0 0 chr13 22194501 22194522 -98089790 + AT_rich Low_complexity Low_complexity 1 21 0 3 754 203 125 25 0 chr13 22197295 22197335 -98086977 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 3 754 3243 219 56 42 chr13 22197923 22198239 -98086073 - Lx6 LINE L1 -337 7123 6774 3 754 2004 205 94 77 chr13 22198239 22198762 -98085550 + RMER16 LTR ERVK 2 533 0 3 754 3243 219 56 42 chr13 22198762 22198797 -98085515 - Lx6 LINE L1 -687 6773 6746 3 754 1432 61 55 0 chr13 22198797 22198978 -98085334 - B2_Mm2 SINE B2 -4 191 1 3 754 3243 219 56 42 chr13 22198978 22199397 -98084915 - Lx6 LINE L1 -715 6745 6341 3 754 1035 230 48 96 chr13 22199418 22199774 -98084538 - L1_Mur2 LINE L1 -770 5110 4772 3 754 36 0 0 0 chr13 22199774 22199810 -98084502 + AT_rich Low_complexity Low_complexity 1 36 0 3 754 3486 45 0 12 chr13 22199815 22200222 -98084090 - L1_Mus1 LINE L1 -2 6565 6164 3 754 5833 146 30 22 chr13 22200223 22201334 -98082978 - L1_Mur2 LINE L1 -2404 3473 2355 3 754 554 312 66 119 chr13 22201425 22201894 -98082418 - RLTR12B LTR ERVK -43 485 42 3 754 1885 140 17 78 chr13 22201916 22202326 -98081986 - L1_Mur2 LINE L1 -3520 2357 1973 3 754 2570 217 128 28 chr13 22202326 22203016 -98081296 + RMER19B LTR ERVK 1 648 -254 3 754 3307 145 35 3 chr13 22203017 22203673 -98080639 - L1_Mur2 LINE L1 -4089 1788 1065 3 754 1157 126 60 6 chr13 22203673 22203856 -98080456 - B2_Mm2 SINE B2 -1 194 2 3 754 1138 200 211 13 chr13 22203856 22204018 -98080294 - L1_Mur2 LINE L1 -6022 1064 903 3 754 653 260 40 85 chr13 22204353 22204576 -98079736 - B3 SINE B2 0 216 4 3 754 402 21 0 0 chr13 22205916 22205963 -98078349 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 754 181 277 130 62 chr13 22206379 22206525 -98077787 - L2b LINE L2 -20 3355 3200 3 754 2671 101 139 37 chr13 22206638 22207069 -98077243 + IAPLTR2_Mm LTR ERVK 1 475 0 3 754 58049 14 3 17 chr13 22207070 22213631 -98070681 + IAPEz-int LTR ERVK 9 6481 0 3 754 2634 106 139 37 chr13 22213631 22214062 -98070250 + IAPLTR2_Mm LTR ERVK 1 475 0 3 754 204 146 0 59 chr13 22214988 22215039 -98069273 + A-rich Low_complexity Low_complexity 3 50 0 3 754 218 278 167 0 chr13 22216196 22216268 -98068044 - PB1D10 SINE Alu -23 94 11 3 754 250 355 116 0 chr13 22217502 22217623 -98066689 + MTE2a LTR MaLR 6 140 -239 3 754 378 298 40 64 chr13 22217588 22217898 -98066414 + MT2A LTR ERVL 106 446 -87 3 754 26 30 0 0 chr13 22218010 22218043 -98066269 + AT_rich Low_complexity Low_complexity 1 33 0 3 754 324 309 116 13 chr13 22218272 22218583 -98065729 - L1MA9 LINE L1 -24 6288 5946 3 754 242 286 11 56 chr13 22219875 22219964 -98064348 + CT-rich Low_complexity Low_complexity 5 89 0 3 754 22 0 0 0 chr13 22220145 22220167 -98064145 + AT_rich Low_complexity Low_complexity 1 22 0 3 754 216 0 0 0 chr13 22220723 22220747 -98063565 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 754 1073 243 87 53 chr13 22220847 22221203 -98063109 - RLTR9A LTR ERVK 0 368 1 3 754 816 280 83 52 chr13 22221698 22221900 -98062412 - RMER16-int LTR ERVK -1202 6204 5988 4 754 315 0 0 0 chr13 22221900 22221935 -98062377 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 754 5379 90 53 35 chr13 22221935 22222310 -98062002 - RMER16-int LTR ERVK -1608 3798 3423 4 754 4695 49 23 18 chr13 22222310 22222871 -98061441 - LTRIS2 LTR ERV1 0 564 1 4 754 12446 120 49 22 chr13 22222871 22224714 -98059598 - RMER16-int LTR ERVK -1980 3426 1566 4 754 793 140 217 12 chr13 22224816 22225158 -98059154 - RMER16-int LTR ERVK -4740 666 255 4 754 531 0 0 0 chr13 22225269 22225328 -98058984 + (TC)n Simple_repeat Simple_repeat 1 59 0 4 754 900 247 90 56 chr13 22225664 22226020 -98058292 - RLTR9A LTR ERVK 0 368 1 4 754 1059 43 0 161 chr13 22226518 22226710 -98057602 + L1Md_F3 LINE L1 6410 6570 -14 4 754 1393 246 80 10 chr13 22226889 22227279 -98057033 + RLTR28B LTR ERVL 17 433 -48 4 754 307 250 0 42 chr13 22227718 22227789 -98056523 - B4 SINE B4 -221 71 4 4 754 338 0 24 0 chr13 22228162 22228204 -98056108 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 4 754 576 0 0 0 chr13 22228624 22228688 -98055624 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 754 338 247 46 23 chr13 22229171 22229258 -98055054 + PB1D9 SINE Alu 20 108 -12 4 754 6436 114 21 20 chr13 22229482 22229624 -98054688 - RMER16-int LTR ERVK -1602 3804 3668 4 754 1189 61 0 0 chr13 22229624 22229771 -98054541 - B1_Mus1 SINE Alu 0 148 2 4 754 673 78 11 0 chr13 22229771 22229861 -98054451 - 4.5SRNA scRNA scRNA -3 91 1 4 754 6436 114 21 20 chr13 22229861 22230786 -98053526 - RMER16-int LTR ERVK -1739 3667 2735 4 754 238 100 37 74 chr13 22230803 22230857 -98053455 + ORR1A3-int LTR MaLR 589 640 -1323 4 754 291 26 0 0 chr13 22230857 22230895 -98053417 + MERVL-int LTR ERVL 5448 5485 0 4 754 1172 236 15 107 chr13 22230918 22231321 -98052991 + RLTR11A LTR ERVK 163 528 0 4 754 206 339 148 56 chr13 22231668 22231971 -98052341 + L2 LINE L2 2420 2750 -669 4 754 227 350 134 84 chr13 22231971 22232233 -98052079 + LTR16B1 LTR ERVL 25 299 -181 4 754 260 211 13 26 chr13 22232783 22232861 -98051451 - Lx9 LINE L1 -176 7468 7392 4 754 510 241 198 0 chr13 22232897 22233013 -98051299 + B1_Mur2 SINE Alu 6 144 -5 4 754 25 0 0 0 chr13 22233020 22233045 -98051267 + AT_rich Low_complexity Low_complexity 1 25 0 4 754 340 326 73 47 chr13 22233524 22233639 -98050673 - MT2A LTR ERVL -291 242 5 4 754 342 308 111 0 chr13 22233639 22233756 -98050556 - MTE2b LTR MaLR -245 134 5 4 754 668 181 8 8 chr13 22233756 22233873 -98050439 + B1_Mur2 SINE Alu 1 117 -32 4 754 221 238 47 16 chr13 22235879 22235943 -98048369 + MIRm SINE MIR 195 260 -16 4 754 511 294 30 5 chr13 22238434 22238632 -98045680 - B3 SINE B2 -12 204 2 4 754 181 368 51 8 chr13 22238779 22238897 -98045415 + MIRb SINE MIR 26 148 -120 4 754 363 113 0 0 chr13 22240185 22240247 -98044065 + (CAA)n Simple_repeat Simple_repeat 1 62 0 4 754 531 300 31 10 chr13 22240276 22240468 -98043844 - Lx7 LINE L1 -452 7244 7049 4 754 1047 170 110 0 chr13 22240461 22240679 -98043633 - Lx5 LINE L1 -973 6077 5836 4 754 441 90 0 0 chr13 22241127 22241194 -98043118 + (TG)n Simple_repeat Simple_repeat 1 67 0 4 754 2514 161 10 28 chr13 22241271 22241770 -98042542 - Lx5 LINE L1 -38 5839 5350 4 754 6382 91 9 2 chr13 22241853 22242836 -98041476 - MusHAL1 LINE L1 -627 2085 1096 4 754 1845 110 3 21 chr13 22242836 22243125 -98041187 + RMER16 LTR ERVK 250 533 0 4 754 251 294 150 8 chr13 22243346 22243466 -98040846 + MTE2a LTR MaLR 1 137 -242 4 754 326 347 6 67 chr13 22243429 22243608 -98040704 + MT2A LTR ERVL 100 267 -266 4 754 323 258 143 13 chr13 22243983 22244207 -98040105 - L1MA9 LINE L1 -110 6202 5950 4 754 986 32 0 16 chr13 22245509 22245636 -98038676 + (TCTCC)n Simple_repeat Simple_repeat 2 126 0 4 754 204 305 0 17 chr13 22245647 22245707 -98038605 + CT-rich Low_complexity Low_complexity 5 63 0 4 754 343 167 36 0 chr13 22246156 22246240 -98038072 + GA-rich Low_complexity Low_complexity 2 88 0 4 754 194 62 0 30 chr13 22246881 22246914 -98037398 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 4 754 214 182 23 0 chr13 22247467 22247511 -98036801 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 754 387 322 138 16 chr13 22247570 22247816 -98036496 - B4A SINE B4 -14 278 3 4 754 60 37 0 0 chr13 22248129 22248210 -98036102 + AT_rich Low_complexity Low_complexity 1 81 0 4 754 453 19 0 0 chr13 22248394 22248448 -98035864 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 754 1235 304 6 3 chr13 22248617 22248950 -98035362 - Lx6 LINE L1 -172 7288 6955 4 754 305 136 14 70 chr13 22248998 22249069 -98035243 + MMETn-int LTR ERVK 4778 4844 0 4 754 1382 154 32 101 chr13 22249069 22249415 -98034897 + RLTRETN_Mm LTR ERVK 1 322 0 4 754 21848 84 4 30 chr13 22249416 22253367 -98030945 + MMETn-int LTR ERVK 2 5109 -2297 4 754 8934 147 19 35 chr13 22253367 22255408 -98028904 + MMETn-int LTR ERVK 3219 7299 -107 4 754 1396 148 32 101 chr13 22255408 22255754 -98028558 + RLTRETN_Mm LTR ERVK 1 322 0 4 754 1826 148 54 91 chr13 22257676 22258084 -98026228 + RLTR9C LTR ERVK 1 393 0 4 754 266 233 22 55 chr13 22258101 22258192 -98026120 + MMETn-int LTR ERVK 17 104 -4740 4 754 3778 174 45 90 chr13 22258227 22259349 -98024963 + MMETn-int LTR ERVK 108 1179 -3665 4 754 2551 153 35 8 chr13 22259370 22259859 -98024453 + ETnERV2-int LTR ERVK 2496 2997 -4409 4 754 896 158 0 24 chr13 22259859 22260028 -98024284 + RLTR13D1 LTR ERVK 486 650 -156 4 754 279 0 0 0 chr13 22260330 22260361 -98023951 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 754 3870 177 18 42 chr13 22260588 22262628 -98021684 + ETnERV2-int LTR ERVK 2367 6422 -984 4 754 464 97 0 0 chr13 22262843 22262915 -98021397 + ETnERV2-int LTR ERVK 7331 7402 -4 4 754 2149 121 52 82 chr13 22262923 22263328 -98020984 + RLTR9C LTR ERVK 1 393 0 4 754 4779 151 3 51 chr13 22263328 22264257 -98020055 - L1VL1 LINE L1 -5322 1100 216 4 754 650 218 79 11 chr13 22264339 22264529 -98019783 - RLTR42-int LTR ERVK -4155 1367 1165 4 754 1478 137 148 10 chr13 22265686 22265989 -98018323 - IAPLTR4 LTR ERVK 0 345 1 4 754 287 214 14 0 chr13 22268192 22268262 -98016050 - L1_Mur3 LINE L1 -1625 4255 4185 4 754 656 222 61 18 chr13 22268286 22268302 -98016010 - ORR1C2 LTR MaLR -212 172 159 4 754 462 36 0 0 chr13 22268302 22268358 -98015954 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 754 656 222 61 18 chr13 22268358 22268506 -98015806 - ORR1C2 LTR MaLR -226 158 1 4 754 24 0 0 0 chr13 22268847 22268871 -98015441 + AT_rich Low_complexity Low_complexity 1 24 0 4 754 254 217 0 14 chr13 22269782 22269852 -98014460 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 754 588 282 33 28 chr13 22270078 22270290 -98014022 + B3 SINE B2 4 216 0 4 754 288 91 0 0 chr13 22271743 22271787 -98012525 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 754 2711 80 11 3 chr13 22273531 22273908 -98010404 - L1_Mus3 LINE L1 -6 6632 6253 4 754 351 0 0 0 chr13 22275761 22275800 -98008512 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 754 748 225 33 19 chr13 22276172 22276385 -98007927 - B3 SINE B2 0 216 1 4 754 330 301 37 69 chr13 22276501 22276690 -98007622 - B3A SINE B2 -11 187 5 4 754 262 259 11 45 chr13 22276862 22276951 -98007361 + MLT1A1 LTR MaLR 323 408 0 4 754 252 325 52 9 chr13 22277092 22277207 -98007105 + L2a LINE L2 3307 3426 0 4 754 922 227 8 21 chr13 22277390 22277624 -98006688 - Lx6 LINE L1 -1457 6003 5773 4 754 261 203 62 15 chr13 22277626 22277691 -98006621 + Lx5 LINE L1 6588 6655 -395 4 754 1719 138 45 0 chr13 22278224 22278515 -98005797 + ORR1A2 LTR MaLR 16 319 -8 4 754 29 0 0 0 chr13 22278748 22278777 -98005535 + AT_rich Low_complexity Low_complexity 1 29 0 4 754 189 0 0 0 chr13 22280623 22280644 -98003668 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 754 974 55 79 0 chr13 22280644 22280771 -98003541 - B1_Mm SINE Alu -10 137 1 4 754 201 195 0 0 chr13 22281797 22281838 -98002474 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 754 612 167 0 0 chr13 22281870 22281990 -98002322 + (TA)n Simple_repeat Simple_repeat 1 120 0 4 755 180 279 24 48 chr13 22282286 22282369 -98001943 + MIR SINE MIR 173 253 -9 4 755 775 231 23 73 chr13 22283236 22283455 -98000857 + B3 SINE B2 3 210 -6 4 755 212 100 25 0 chr13 22283485 22283525 -98000787 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 755 1965 134 59 153 chr13 22283814 22284272 -98000040 - RLTR9F LTR ERVK 0 415 1 4 755 432 125 27 14 chr13 22284273 22284346 -97999966 - ETnERV2-int LTR ERVK -2 7404 7331 4 755 5925 149 3 21 chr13 22284564 22285647 -97998665 - ETnERV2-int LTR ERVK -1179 6227 5407 4 755 35 41 0 0 chr13 22285666 22285715 -97998597 + AT_rich Low_complexity Low_complexity 1 49 0 4 755 22 0 0 0 chr13 22285821 22285843 -97998469 + AT_rich Low_complexity Low_complexity 1 22 0 4 755 11904 27 1 31 chr13 22285862 22288045 -97996267 - L1Md_T LINE L1 0 6582 4466 4 755 9095 248 43 30 chr13 22288045 22291643 -97992669 - ETnERV2-int LTR ERVK -1988 5418 1000 4 755 3409 38 2 2 chr13 22291643 22292039 -97992273 + MTA_Mm LTR MaLR 1 396 0 4 755 6136 242 19 27 chr13 22292039 22293105 -97991207 - ETnERV2-int LTR ERVK -2188 1126 2 4 755 1320 154 60 79 chr13 22293106 22293496 -97990816 - RLTR9F LTR ERVK -4 411 1 4 755 183 156 0 0 chr13 22294040 22294072 -97990240 + (TATG)n Simple_repeat Simple_repeat 3 34 0 4 755 344 89 36 0 chr13 22294197 22294253 -97990059 + (TATG)n Simple_repeat Simple_repeat 3 60 0 4 755 1085 296 13 10 chr13 22294267 22294748 -97989564 - Lx5 LINE L1 -733 6727 6002 4 755 506 270 0 62 chr13 22294730 22294860 -97989452 + Lx6 LINE L1 7254 7378 -82 4 755 2107 188 15 3 chr13 22294860 22295249 -97989063 - ORR1B1 LTR MaLR 0 394 1 4 755 506 270 0 62 chr13 22295249 22295280 -97989032 + Lx6 LINE L1 7379 7405 -55 4 755 222 118 0 0 chr13 22295287 22295321 -97988991 + (TAATG)n Simple_repeat Simple_repeat 5 38 0 4 755 3542 20 2 0 chr13 22296217 22296612 -97987700 - MTA_Mm LTR MaLR 0 396 1 4 755 1315 27 0 0 chr13 22296612 22296800 -97987512 - MTA_Mm-int LTR MaLR 0 1098 911 4 755 39889 33 0 0 chr13 22296800 22302211 -97982101 - L1Md_T LINE L1 -2 6580 1170 4 755 4757 140 40 47 chr13 22302217 22303133 -97981179 - L1Md_T LINE L1 -5411 1205 296 4 755 7438 17 0 0 chr13 22303135 22304061 -97980251 - MTA_Mm-int LTR MaLR -172 926 1 4 755 3568 18 2 0 chr13 22304061 22304456 -97979856 - MTA_Mm LTR MaLR 0 396 1 4 755 631 354 28 12 chr13 22304765 22305188 -97979124 - L1M2 LINE L1 -1062 5081 4652 4 755 572 246 33 92 chr13 22305214 22305455 -97978857 + Lx9 LINE L1 5900 6230 -1414 4 755 1597 200 96 0 chr13 22305455 22305790 -97978522 - ORR1B2 LTR MaLR 0 367 1 4 755 975 312 12 47 chr13 22305790 22306156 -97978156 + Lx9 LINE L1 6137 6638 -1006 4 755 225 0 0 0 chr13 22306183 22306208 -97978104 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 755 601 298 51 0 chr13 22306208 22306366 -97977946 - B3 SINE B2 -50 166 1 4 755 188 34 0 33 chr13 22306590 22306620 -97977692 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 755 459 87 0 14 chr13 22306620 22306679 -97977633 - B1_Mus2 SINE Alu -10 137 79 4 755 4632 188 59 10 chr13 22306853 22307719 -97976593 + RMER13B LTR ERVK 1 908 0 4 755 339 25 0 0 chr13 22307860 22307900 -97976412 + (GA)n Simple_repeat Simple_repeat 2 41 0 5 755 240 35 0 0 chr13 22307900 22307928 -97976384 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 755 180 0 0 0 chr13 22310526 22310546 -97973766 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 755 207 0 0 0 chr13 22312042 22312065 -97972247 + (A)n Simple_repeat Simple_repeat 1 23 0 5 755 385 310 13 40 chr13 22312192 22312343 -97971969 - RLTR43A LTR ERVK 0 364 218 5 755 180 0 0 0 chr13 22313788 22313808 -97970504 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 755 527 319 13 13 chr13 22313847 22314006 -97970306 - B3A SINE B2 -38 160 2 5 755 3143 265 87 15 chr13 22315599 22317443 -97966869 - Lx7 LINE L1 -329 7367 5305 5 755 774 180 189 5 chr13 22317445 22317635 -97966677 + URR1B DNA MER1_type 1 225 0 5 755 462 258 117 19 chr13 22317697 22317859 -97966453 - Lx6 LINE L1 -3 7457 7280 5 755 638 239 18 12 chr13 22317868 22318033 -97966279 - Lx7 LINE L1 -613 5267 5102 5 755 11140 53 47 3 chr13 22318031 22320027 -97964285 + L1Md_F2 LINE L1 4496 6582 0 5 755 494 261 0 8 chr13 22320025 22320145 -97964167 - Lx7 LINE L1 -767 5113 4995 5 755 32 26 0 0 chr13 22320155 22320194 -97964118 + AT_rich Low_complexity Low_complexity 1 39 0 5 755 766 93 0 0 chr13 22320215 22320333 -97963979 - L1_Mus2 LINE L1 0 6566 6449 5 755 2862 39 0 3 chr13 22320333 22320671 -97963641 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 755 9620 23 2 5 chr13 22320671 22321756 -97962556 - IAPEz-int LTR ERVK 0 6481 5400 5 755 21148 40 42 15 chr13 22321731 22324326 -97959986 - IAPEz-int LTR ERVK -3807 2674 8 5 755 2862 39 0 3 chr13 22324326 22324664 -97959648 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 755 3689 85 4 2 chr13 22324664 22325148 -97959164 - L1_Mus2 LINE L1 -112 6454 5970 5 755 3999 113 2 0 chr13 22325148 22325715 -97958597 - L1_Mm LINE L1 -849 5034 4467 5 755 469 196 0 30 chr13 22325713 22325813 -97958499 - L1Md_F LINE L1 -5853 666 570 5 755 336 317 61 51 chr13 22326152 22326348 -97957964 - B3A SINE B2 0 198 1 5 755 364 277 153 0 chr13 22326589 22326726 -97957586 + RSINE1 SINE B4 2 159 -6 5 755 23 33 0 0 chr13 22326747 22326777 -97957535 + AT_rich Low_complexity Low_complexity 1 30 0 5 755 513 193 17 17 chr13 22328017 22328133 -97956179 + ORR1D1 LTR MaLR 1 116 -258 5 755 534 268 46 23 chr13 22328135 22328265 -97956047 + ETnERV2-int LTR ERVK 7070 7202 -204 5 755 350 260 0 40 chr13 22328655 22328731 -97955581 + ORR1D1 LTR MaLR 111 183 -195 5 755 7711 68 6 9 chr13 22328731 22329779 -97954533 - L1_Mus2 LINE L1 -5 6561 5518 5 755 5997 87 1 2 chr13 22329778 22330596 -97953716 + L1_Mus2 LINE L1 4693 5509 -374 5 755 256 236 39 5 chr13 22330602 22330718 -97953594 + ORR1D1 LTR MaLR 174 384 0 5 755 398 349 35 20 chr13 22330874 22331128 -97953184 - MER67C LTR ERV1 -380 331 74 5 755 21 0 0 0 chr13 22331153 22331174 -97953138 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 390 21 0 0 chr13 22333451 22333498 -97950814 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 755 297 303 10 39 chr13 22333510 22333613 -97950699 - B1_Mur4 SINE Alu -32 118 19 5 755 619 266 25 41 chr13 22333522 22333718 -97950594 - B4A SINE B4 -99 193 1 5 755 25 65 0 0 chr13 22334026 22334072 -97950240 + AT_rich Low_complexity Low_complexity 1 46 0 5 755 587 344 60 26 chr13 22334777 22335046 -97949266 - B4A SINE B4 -7 285 8 5 755 27 0 0 0 chr13 22335070 22335097 -97949215 + AT_rich Low_complexity Low_complexity 1 27 0 5 755 251 312 25 51 chr13 22335170 22335288 -97949024 - Zaphod DNA Tip100 -3715 316 202 5 755 3260 155 151 14 chr13 22337705 22338413 -97945899 + RLTR22_Mur LTR ERVK 1 805 -1043 5 755 24311 64 22 80 chr13 22338661 22343540 -97940772 - L1Md_F2 LINE L1 0 6582 2009 5 755 1122 180 83 12 chr13 22343603 22343845 -97940467 + RLTR22_Mur LTR ERVK 1590 1848 0 5 755 2036 186 74 10 chr13 22344659 22345051 -97939261 + MTC LTR MaLR 1 417 -4 5 755 20829 156 30 44 chr13 22346374 22346952 -97937360 + Lx5 LINE L1 1462 2054 -3823 5 755 435 38 0 0 chr13 22346952 22347005 -97937307 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 755 20829 156 30 44 chr13 22347005 22347507 -97936805 + Lx5 LINE L1 2055 2563 -3314 5 755 1111 76 21 0 chr13 22347507 22347652 -97936660 + B1_Mus1 SINE Alu 1 148 0 5 755 20829 164 30 43 chr13 22347652 22352227 -97932085 + Lx5 LINE L1 2564 7047 -3 5 755 1459 193 51 17 chr13 22354513 22354808 -97929504 - MTB_Mm LTR MaLR -102 305 1 5 755 4538 175 38 19 chr13 22354808 22355670 -97928642 - MTB_Mm-int LTR MaLR 0 1258 380 5 755 21 0 0 0 chr13 22355682 22355703 -97928609 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 27182 72 1 1 chr13 22355703 22360148 -97924164 - L1Md_F2 LINE L1 -6 6576 2134 5 755 2006 199 15 2 chr13 22360148 22360541 -97923771 - MTB_Mm-int LTR MaLR -859 399 2 5 755 2554 167 65 53 chr13 22364044 22364612 -97919700 + RMER15 LTR ERVL 1 575 0 5 755 726 221 15 0 chr13 22364664 22364800 -97919512 + ID_B1 SINE B4 87 224 0 5 755 933 90 0 0 chr13 22364849 22364982 -97919330 + (GAAA)n Simple_repeat Simple_repeat 4 136 0 5 755 768 241 54 5 chr13 22366531 22366735 -97917577 - B3 SINE B2 -2 214 1 5 755 731 194 15 0 chr13 22367116 22367250 -97917062 - B1_Mus1 SINE Alu -3 145 10 5 755 1774 184 53 36 chr13 22367949 22368361 -97915951 - MTD LTR MaLR 0 419 1 5 755 896 256 52 13 chr13 22368361 22368588 -97915724 + MTD LTR MaLR 170 405 -14 5 755 1846 243 101 6 chr13 22368761 22369246 -97915066 - RMER15 LTR ERVL -18 557 27 5 755 407 236 59 102 chr13 22371468 22371586 -97912726 + B1_Mur1 SINE Alu 3 115 -34 5 755 301 290 105 68 chr13 22371586 22371601 -97912711 + ID_B1 SINE B4 84 221 -3 5 755 336 260 82 2 chr13 22372299 22372509 -97911803 + L1MA5A LINE L1 5693 5928 -1545 5 755 1508 198 148 17 chr13 22372811 22373170 -97911142 + MTD LTR MaLR 14 419 0 5 755 400 311 35 131 chr13 22373258 22373487 -97910825 - RMER20B LTR ERVK -43 584 378 5 755 277 250 102 0 chr13 22373608 22373696 -97910616 + RMER20B LTR ERVK 220 316 -311 5 755 301 309 10 20 chr13 22373934 22374033 -97910279 + PB1D10 SINE Alu 2 99 -18 5 755 2316 93 39 19 chr13 22374823 22375203 -97909109 + IAPLTR2b LTR ERVK 12 383 -2 5 755 351 0 0 0 chr13 22375789 22375828 -97908484 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 755 324 0 0 0 chr13 22375870 22375906 -97908406 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 755 447 19 0 0 chr13 22376877 22376929 -97907383 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 5 755 180 216 0 0 chr13 22377477 22377528 -97906784 + T-rich Low_complexity Low_complexity 1 51 0 5 755 6243 183 50 11 chr13 22377534 22379149 -97905163 - Lx5 LINE L1 -11 7039 5354 5 755 372 253 13 0 chr13 22379504 22379583 -97904729 + B3A SINE B2 1 80 -118 5 755 1520 137 62 79 chr13 22379612 22379953 -97904359 + MURVY-LTR LTR ERV1 185 519 0 5 755 391 0 0 0 chr13 22379953 22379999 -97904313 - L1_Mm LINE L1 -420 5463 5418 5 755 4261 63 0 15 chr13 22379999 22380516 -97903796 + L1_Mus1 LINE L1 6025 6540 -27 5 755 1294 233 22 9 chr13 22380516 22380832 -97903480 + RLTR46 LTR ERVK 1 320 0 5 755 4261 63 0 15 chr13 22380832 22380862 -97903450 + L1_Mus1 LINE L1 6541 6564 -3 5 755 743 236 7 0 chr13 22380882 22381030 -97903282 + B3 SINE B2 68 216 0 5 755 202 289 0 19 chr13 22382324 22382377 -97901935 + CT-rich Low_complexity Low_complexity 2 53 0 5 755 21 0 0 0 chr13 22382981 22383002 -97901310 + AT_rich Low_complexity Low_complexity 1 21 0 5 755 422 316 13 73 chr13 22383259 22383409 -97900903 + ID_B1 SINE B4 80 220 -4 5 755 324 0 0 0 chr13 22383418 22383454 -97900858 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 755 553 220 38 0 chr13 22383517 22383649 -97900663 + MTEa LTR MaLR 1 137 -242 5 755 447 311 129 16 chr13 22384438 22384562 -97899750 - B1F1 SINE Alu -10 139 2 5 755 546 285 80 7 chr13 22386609 22386747 -97897565 + RSINE1 SINE B4 3 150 -15 5 755 740 277 48 16 chr13 22387036 22387223 -97897089 + B3A SINE B2 6 198 0 5 755 263 335 0 134 chr13 22387254 22387440 -97896872 - ID_B1 SINE B4 -1 223 63 5 755 373 240 74 8 chr13 22387676 22387798 -97896514 + L1M2 LINE L1 5620 5749 -551 5 755 187 354 19 57 chr13 22388270 22388375 -97895937 + MIRc SINE MIR 11 111 -157 5 755 832 250 36 79 chr13 22388785 22389439 -97894873 + RLTR19-int LTR ERVK 1929 2788 -3349 5 755 274 216 48 105 chr13 22392390 22392514 -97891798 + B1F2 SINE Alu 30 146 -3 5 755 687 350 14 53 chr13 22392582 22392866 -97891446 + B4A SINE B4 13 285 -7 5 755 207 0 0 0 chr13 22393860 22393883 -97890429 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 755 575 362 33 52 chr13 22393960 22394172 -97890140 + B4 SINE B4 4 213 -79 5 755 234 0 0 0 chr13 22394172 22394198 -97890114 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 755 575 362 33 52 chr13 22394198 22394256 -97890056 + B4 SINE B4 214 269 -23 5 755 450 0 0 0 chr13 22394256 22394306 -97890006 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 755 23 33 0 0 chr13 22395083 22395113 -97889199 + AT_rich Low_complexity Low_complexity 1 30 0 5 755 373 356 36 16 chr13 22395138 22395389 -97888923 + MER67C LTR ERV1 76 331 -380 5 755 801 253 19 58 chr13 22395541 22395833 -97888479 - ORR1D1 LTR MaLR 0 384 3 5 755 2040 78 13 13 chr13 22395920 22396218 -97888094 - L1Md_F2 LINE L1 -2 6580 6283 5 755 1119 111 0 12 chr13 22396726 22396890 -97887422 - RLTR23 LTR ERV1 -2 428 267 5 755 410 239 83 90 chr13 22396903 22397059 -97887253 + Lx3_Mus LINE L1 8 162 -6822 5 755 9081 96 12 11 chr13 22397055 22399765 -97884547 + Lx3_Mus LINE L1 4343 6992 -17 5 755 353 185 58 69 chr13 22399785 22399872 -97884440 - RLTR23 LTR ERV1 -150 280 195 5 755 4528 50 5 12 chr13 22399909 22400477 -97883835 + LTRIS2 LTR ERV1 1 564 0 5 755 374 261 15 8 chr13 22400962 22401093 -97883219 + MuRRS4-int LTR ERV1 391 522 -7034 5 755 4473 122 23 15 chr13 22401115 22401850 -97882462 + RMER16-int LTR ERVK 704 1444 -3962 5 755 1745 214 100 6 chr13 22401841 22402542 -97881770 + MuRRS4-int LTR ERV1 760 1526 -3537 5 755 7596 85 6 24 chr13 22402588 22402652 -97881660 + RLTR1B-int LTR ERV1 1125 1169 -2130 5 755 402 21 0 0 chr13 22402652 22402699 -97881613 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 755 7596 87 13 16 chr13 22402699 22404522 -97879790 + RLTR1B-int LTR ERV1 1170 3751 -1312 5 755 587 340 14 14 chr13 22404520 22404809 -97879503 + RLTR1B-int LTR ERV1 3857 4145 -918 5 755 882 211 29 0 chr13 22404895 22405103 -97879209 + RLTR1B-int LTR ERV1 4788 5001 -62 5 755 466 35 0 0 chr13 22405124 22405182 -97879130 + LTRIS2 LTR ERV1 1 58 -506 5 755 747 42 10 0 chr13 22405182 22405278 -97879034 + LTRIS2 LTR ERV1 468 564 0 5 755 535 100 151 32 chr13 22405278 22405371 -97878941 - RLTR23 LTR ERV1 -326 104 1 5 755 269 331 13 25 chr13 22406399 22406557 -97877755 - MuRRS4-int LTR ERV1 -1439 3878 3723 5 755 970 295 46 15 chr13 22406752 22407174 -97877138 - MuRRS4-int LTR ERV1 -1156 3907 3528 5 755 253 287 11 11 chr13 22407578 22407673 -97876639 - MURVY-int LTR ERV1 -3160 4292 4198 5 755 338 323 29 40 chr13 22407700 22407980 -97876332 - MuRRS4-int LTR ERV1 -2110 2953 2763 5 755 1075 169 15 44 chr13 22408271 22408475 -97875837 - RLTR23 LTR ERV1 0 430 233 6 755 1122 81 0 20 chr13 22408572 22408723 -97875589 - B1_Mus1 SINE Alu 0 148 1 6 755 21 0 0 0 chr13 22408731 22408752 -97875560 + AT_rich Low_complexity Low_complexity 1 21 0 6 755 2416 82 0 0 chr13 22408756 22409073 -97875239 - L1_Mus1 LINE L1 0 6567 6251 6 755 1146 52 0 13 chr13 22409067 22409223 -97875089 + L1Md_F2 LINE L1 6415 6568 -14 6 755 727 220 65 136 chr13 22409240 22409519 -97874793 - RLTR23 LTR ERV1 -171 259 1 6 755 483 265 19 154 chr13 22409706 22409965 -97874347 + MT2B LTR ERVL 1 224 -377 6 755 985 242 70 85 chr13 22410925 22411255 -97873057 + MT2B LTR ERVL 274 598 -3 6 755 1280 198 209 65 chr13 22411790 22412231 -97872081 - RLTR28 LTR ERVL -20 504 1 6 755 583 300 60 5 chr13 22412740 22412941 -97871371 - B3 SINE B2 -4 212 1 6 756 2396 210 62 20 chr13 22413474 22413573 -97870739 - RLTR20B3 LTR ERVK -4 573 483 6 756 318 87 0 0 chr13 22413573 22413619 -97870693 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 756 2396 210 62 20 chr13 22413619 22414069 -97870243 - RLTR20B3 LTR ERVK -95 482 3 6 756 5183 192 46 9 chr13 22414113 22415180 -97869132 + Lx2B LINE L1 5892 6997 -3 6 756 270 254 66 66 chr13 22417226 22417249 -97867063 + B4A SINE B4 63 85 -207 6 756 306 265 48 0 chr13 22417249 22417332 -97866980 + PB1D9 SINE Alu 1 87 -33 6 756 307 304 32 25 chr13 22417786 22417933 -97866379 - PB1D10 SINE Alu 0 149 3 6 756 447 19 0 0 chr13 22418288 22418340 -97865972 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 756 243 0 0 0 chr13 22418348 22418375 -97865937 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 756 270 253 12 0 chr13 22421763 22421846 -97862466 + L1M3 LINE L1 5354 5437 -731 6 756 222 304 89 0 chr13 22421854 22421933 -97862379 + B4A SINE B4 1 86 -206 6 756 480 122 0 0 chr13 22422016 22422098 -97862214 + (CA)n Simple_repeat Simple_repeat 2 83 0 6 756 1051 193 92 11 chr13 22422099 22422361 -97861951 + RLTR40 LTR ERVK 7 289 -528 6 756 1457 215 42 26 chr13 22422366 22422575 -97861737 - MTD LTR MaLR -3 416 199 6 756 533 72 0 24 chr13 22422575 22422660 -97861652 - Lx2 LINE L1 0 6997 6915 6 756 1457 215 42 26 chr13 22422660 22422760 -97861552 - MTD LTR MaLR -221 198 103 6 756 7243 82 6 1 chr13 22422761 22424415 -97859897 + L1_Mus1 LINE L1 4903 6567 0 6 756 573 189 9 18 chr13 22424422 22424535 -97859777 - MTD LTR MaLR -299 120 9 6 756 1275 66 0 0 chr13 22424535 22424701 -97859611 + L1_Mus1 LINE L1 6402 6567 0 6 756 22 0 0 0 chr13 22424701 22424723 -97859589 + AT_rich Low_complexity Low_complexity 1 22 0 6 756 7142 167 17 11 chr13 22426088 22427797 -97856515 - Lx5 LINE L1 -12 7038 5309 6 756 907 116 0 0 chr13 22427798 22427927 -97856385 + B1_Mus1 SINE Alu 18 146 -2 6 756 216 284 0 0 chr13 22428042 22428109 -97856203 + G-rich Low_complexity Low_complexity 1 67 0 6 756 1519 156 98 7 chr13 22428377 22428654 -97855658 - ORR1B1 LTR MaLR -92 302 1 6 756 720 282 103 35 chr13 22428657 22428947 -97855365 - RMER5 LTR ERV1 -221 313 4 6 756 843 255 20 25 chr13 22429457 22429654 -97854658 - B3A SINE B2 -1 197 2 6 756 270 0 0 0 chr13 22429892 22429922 -97854390 + (A)n Simple_repeat Simple_repeat 1 30 0 6 756 4957 170 33 14 chr13 22429945 22430965 -97853347 - L1_Mur2 LINE L1 -566 5311 4272 6 756 10831 119 35 37 chr13 22430966 22433002 -97851310 - L1_Mur2 LINE L1 -1711 4166 2135 6 756 2879 18 0 0 chr13 22433006 22433344 -97850968 + ORR1A0 LTR MaLR 1 338 -8 6 756 4219 43 4 2 chr13 22433363 22433897 -97850415 + ORR1A0-int LTR MaLR 1258 1792 0 6 756 3058 14 6 0 chr13 22433897 22434241 -97850071 + ORR1A0 LTR MaLR 1 346 0 6 756 4585 143 31 45 chr13 22434254 22435369 -97848943 - L1_Mur2 LINE L1 -3755 2122 1024 6 756 509 178 32 13 chr13 22435369 22435523 -97848789 + CT-rich Low_complexity Low_complexity 2 158 0 6 756 1237 68 0 17 chr13 22435523 22435702 -97848610 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 6 756 579 189 54 23 chr13 22435718 22435848 -97848464 - L1_Mur2 LINE L1 -6137 949 816 6 756 279 0 0 0 chr13 22436574 22436605 -97847707 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 756 5225 111 20 19 chr13 22437299 22438104 -97846208 - RLTR13D1 LTR ERVK 0 806 1 6 756 781 165 0 30 chr13 22438342 22438473 -97845839 - B3 SINE B2 -87 129 3 6 756 988 88 0 75 chr13 22439287 22439362 -97844950 + B1_Mus1 SINE Alu 2 71 -77 6 756 3094 111 2 2 chr13 22439362 22439795 -97844517 - RLTR10C LTR ERVK -3 433 1 6 756 988 88 0 75 chr13 22439795 22439866 -97844446 + B1_Mus1 SINE Alu 72 137 -11 6 756 318 26 0 0 chr13 22439866 22439905 -97844407 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 756 988 88 0 75 chr13 22439905 22439916 -97844396 + B1_Mus1 SINE Alu 138 148 0 6 756 1486 254 104 3 chr13 22440367 22440955 -97843357 + L1_Mur3 LINE L1 2042 2688 -3192 6 756 754 266 17 23 chr13 22441911 22442088 -97842224 - B3 SINE B2 0 216 41 6 756 219 394 75 15 chr13 22443001 22443202 -97841110 - MIRb SINE MIR -39 229 17 6 756 228 35 0 0 chr13 22443359 22443388 -97840924 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 6 756 579 262 0 45 chr13 22443390 22443522 -97840790 - B1_Mm SINE Alu -21 126 1 6 756 3657 134 186 101 chr13 22444759 22445594 -97838718 - RMER17A2 LTR ERVK 0 906 1 6 756 22 35 0 0 chr13 22447333 22447362 -97836950 + AT_rich Low_complexity Low_complexity 1 29 0 6 756 794 252 64 81 chr13 22447674 22448125 -97836187 + RLTR12B LTR ERVK 100 497 -31 6 756 234 265 54 0 chr13 22449224 22449371 -97834941 + (TGAG)n Simple_repeat Simple_repeat 2 156 0 6 756 303 113 0 0 chr13 22449488 22449541 -97834771 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 756 236 294 108 79 chr13 22449544 22449747 -97834565 + RLTR25A LTR ERVK 895 1103 0 6 756 762 232 93 40 chr13 22450841 22451164 -97833148 + RLTR15 LTR ERVK 1 340 -19 6 756 24 0 0 0 chr13 22451633 22451657 -97832655 + AT_rich Low_complexity Low_complexity 1 24 0 6 756 2225 143 13 29 chr13 22451695 22452069 -97832243 + RLTR9A LTR ERVK 1 368 0 6 756 1149 281 60 44 chr13 22452455 22452905 -97831407 + MYSERV16_I-int LTR ERVK 3775 4231 -2319 6 756 1847 249 59 40 chr13 22452919 22453695 -97830617 + MYSERV16_I-int LTR ERVK 43 753 -1573 6 756 2125 183 80 42 chr13 22453695 22454236 -97830076 + RLTR31_Mm LTR ERVK 1 561 0 6 756 710 283 10 35 chr13 22454236 22454268 -97830044 + MYSERV16_I-int LTR ERVK 5010 5035 -1515 6 756 1113 203 48 13 chr13 22454381 22454611 -97829701 - RMER13B LTR ERVK -98 810 573 6 756 34754 74 11 5 chr13 22454663 22459229 -97825083 - L1Md_F2 LINE L1 -9 6573 1982 6 756 279 0 0 0 chr13 22459229 22459260 -97825052 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 756 34754 122 57 17 chr13 22459260 22460922 -97823390 - L1Md_F2 LINE L1 -3902 1981 217 6 756 345 280 26 53 chr13 22461016 22461129 -97823183 - RMER20B LTR ERVK -26 601 492 6 756 2807 72 6 11 chr13 22461410 22461761 -97822551 - L1_Mus1 LINE L1 0 6567 6219 6 756 2498 144 23 0 chr13 22461761 22462150 -97822162 - RMER13B LTR ERVK -510 398 1 6 756 512 248 15 15 chr13 22462303 22462434 -97821878 - RMER17A-int LTR ERVK -183 1545 1415 6 756 29 28 0 0 chr13 22462764 22462800 -97821512 + AT_rich Low_complexity Low_complexity 1 36 0 6 756 2592 35 0 0 chr13 22463479 22463769 -97820543 + L1Md_A LINE L1 6293 6582 0 6 756 207 0 0 0 chr13 22464221 22464244 -97820068 + (CAGCT)n Simple_repeat Simple_repeat 4 26 0 6 756 336 351 32 7 chr13 22464260 22464415 -97819897 + L1_Mur3 LINE L1 406 564 -7164 6 756 1613 204 51 41 chr13 22464410 22465097 -97819215 + L1_Mur3 LINE L1 859 1547 -4333 6 756 3825 71 63 0 chr13 22465117 22465625 -97818687 - Lx3_Mus LINE L1 0 7009 6470 6 756 3106 83 2 0 chr13 22465625 22466060 -97818252 + L1_Mur1 LINE L1 1863 2298 -3588 6 756 5818 195 84 25 chr13 22466046 22467504 -97816808 + L1_Mur3 LINE L1 1520 3063 -2817 6 756 441 0 0 0 chr13 22467541 22467590 -97816722 + (GGAA)n Simple_repeat Simple_repeat 4 52 0 6 756 2070 214 57 47 chr13 22467609 22468139 -97816173 + RMER1B Other Other 314 848 -218 6 756 3523 64 5 2 chr13 22468134 22468575 -97815737 - L1_Mus1 LINE L1 -249 6318 5877 6 756 1967 61 20 12 chr13 22468575 22468822 -97815490 + L1_Mus1 LINE L1 6319 6567 0 6 756 3356 36 2 35 chr13 22469006 22469407 -97814905 - RLTR10 LTR ERVK -2 388 1 6 756 3063 15 0 0 chr13 22469409 22469746 -97814566 - RLTR10-int LTR ERVK -3 1984 1648 6 756 1625 134 42 14 chr13 22469753 22470080 -97814232 - IAPLTR2a LTR ERVK -129 346 1 6 756 3350 244 59 32 chr13 22470085 22470206 -97814106 + Lx6 LINE L1 5897 6021 -1439 6 756 644 182 142 24 chr13 22470206 22470375 -97813937 + B2_Mm2 SINE B2 2 190 -5 6 756 3350 244 59 32 chr13 22470375 22471206 -97813106 + Lx6 LINE L1 6022 6874 -586 6 756 240 269 84 28 chr13 22471206 22471313 -97812999 + MLT1E1 LTR MaLR 197 309 -345 6 756 565 231 0 0 chr13 22471313 22471430 -97812882 + Lx6 LINE L1 7000 7116 -344 6 756 275 306 50 67 chr13 22472116 22472235 -97812077 + PB1D10 SINE Alu 1 117 0 6 756 2037 130 3 22 chr13 22475613 22475928 -97808384 + Lx LINE L1 6346 6654 0 6 756 690 284 5 33 chr13 22475978 22476193 -97808119 - B3 SINE B2 -4 212 4 6 756 32 0 0 0 chr13 22478500 22478532 -97805780 + AT_rich Low_complexity Low_complexity 1 32 0 6 756 181 258 77 46 chr13 22478779 22478844 -97805468 - L2a LINE L2 -18 3408 3342 6 756 3865 53 0 7 chr13 22480110 22480568 -97803744 + L1_Mus2 LINE L1 6112 6566 0 6 756 4054 182 95 12 chr13 22480739 22481558 -97802754 + RMER13B LTR ERVK 1 887 -21 6 756 530 283 17 0 chr13 22481574 22481694 -97802618 + B3A SINE B2 25 146 -52 6 756 1248 285 140 25 chr13 22481694 22482266 -97802046 + Lx6 LINE L1 6479 7116 -344 6 756 30 45 0 0 chr13 22483017 22483061 -97801251 + AT_rich Low_complexity Low_complexity 1 44 0 6 756 220 191 0 0 chr13 22485111 22485158 -97799154 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 756 8284 147 29 36 chr13 22485210 22485324 -97798988 - Lx2 LINE L1 -1 6996 6884 6 756 189 0 0 0 chr13 22485324 22485345 -97798967 + (CCCA)n Simple_repeat Simple_repeat 1 21 0 6 756 8284 147 29 36 chr13 22485345 22486650 -97797662 - Lx2 LINE L1 -114 6883 5588 6 756 810 281 0 30 chr13 22488068 22488270 -97796042 - B3 SINE B2 -19 197 2 6 756 21 0 0 0 chr13 22488347 22488368 -97795944 + AT_rich Low_complexity Low_complexity 1 21 0 6 756 632 276 6 44 chr13 22489197 22489379 -97794933 - B3A SINE B2 -2 196 22 6 756 487 273 139 7 chr13 22489625 22489769 -97794543 + RSINE1 SINE B4 1 163 -2 6 756 279 157 0 0 chr13 22489788 22489839 -97794473 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 756 466 285 14 68 chr13 22489874 22490021 -97794291 + ORR1C2 LTR MaLR 246 384 0 6 756 681 317 39 5 chr13 22491613 22491816 -97792496 + B3 SINE B2 2 211 -5 6 756 309 51 0 0 chr13 22492562 22492601 -97791711 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 756 230 188 62 0 chr13 22492838 22492886 -97791426 + Charlie24 DNA MER1_type 1631 1681 -769 6 756 278 345 52 0 chr13 22494538 22494712 -97789600 + L1M2 LINE L1 4884 5066 -1077 7 756 33 25 0 0 chr13 22494861 22494901 -97789411 + AT_rich Low_complexity Low_complexity 1 40 0 7 756 1714 228 40 26 chr13 22494954 22495184 -97789128 - RLTR21 LTR ERVK -42 1530 1305 7 756 441 36 0 0 chr13 22495184 22495239 -97789073 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 756 1714 228 40 26 chr13 22495239 22495436 -97788876 - RLTR21 LTR ERVK -268 1304 1097 7 756 2777 163 52 31 chr13 22495407 22496042 -97788270 - RLTR21 LTR ERVK -311 1261 614 7 756 2388 139 74 13 chr13 22496071 22496451 -97787861 + RLTR44A LTR ERVK 3 405 0 7 756 698 95 0 28 chr13 22496513 22496621 -97787691 + RLTR44-int LTR ERVK 877 981 -1831 7 756 600 55 0 0 chr13 22496702 22496775 -97787537 + RLTR44-int LTR ERVK 1417 1489 -1323 7 756 5073 45 2 2 chr13 22497093 22497692 -97786620 + RLTR44-int LTR ERVK 2214 2812 0 7 756 1784 128 89 7 chr13 22497694 22497986 -97786326 + RLTR44A LTR ERVK 3 318 -131 7 756 5272 90 0 17 chr13 22497991 22498683 -97785629 + L1Md_F2 LINE L1 5890 6569 -13 7 756 4970 125 10 14 chr13 22498700 22500000 -97784312 + L1Md_A LINE L1 441 1734 -4149 7 756 28226 57 4 2 chr13 22500000 22503847 -97780465 + L1Md_F3 LINE L1 1735 5586 -297 1 756 8355 35 3 3 chr13 22503847 22504845 -97779467 + L1Md_F3 LINE L1 5587 6584 0 1 756 472 146 30 30 chr13 22504861 22504960 -97779352 + RLTR44A LTR ERVK 307 405 0 2 756 3148 169 68 22 chr13 22504960 22505554 -97778758 - RLTR21 LTR ERVK -950 622 1 3 756 235 272 148 0 chr13 22505684 22505765 -97778547 + MTD LTR MaLR 169 261 -158 4 756 1632 231 163 20 chr13 22506009 22506505 -97777807 - RMER2 LTR ERV1 0 567 1 5 756 957 276 118 16 chr13 22506526 22506928 -97777384 + L1_Mur3 LINE L1 1376 1837 -4043 6 756 303 28 0 0 chr13 22506928 22506964 -97777348 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 7 756 957 276 118 16 chr13 22506964 22507136 -97777176 + L1_Mur3 LINE L1 1838 2009 -3871 6 756 2922 161 64 34 chr13 22507137 22507780 -97776532 + L1_Mur2 LINE L1 4523 5184 -693 8 756 3462 332 34 45 chr13 22508232 22510402 -97773910 - RodERV21-int LTR ERV1 -149 4842 2696 9 756 1826 133 126 19 chr13 22511341 22511922 -97772390 + L1VL2 LINE L1 521 1182 -2433 1 756 768 142 24 8 chr13 22511925 22512062 -97772250 + BGLII_A LTR ERVK 211 445 0 1 756 11211 191 25 13 chr13 22512062 22513227 -97771085 + L1_Mur1 LINE L1 1710 2927 -2959 1 756 1646 42 0 0 chr13 22513227 22513420 -97770892 + B2_Mm1a SINE B2 1 193 0 1 756 11211 191 25 13 chr13 22513420 22514844 -97769468 + L1_Mur1 LINE L1 2928 4331 -1555 1 756 33853 35 1 0 chr13 22514841 22520734 -97763578 + L1Md_T LINE L1 1 5589 -297 1 756 9043 5 0 0 chr13 22520734 22521730 -97762582 + L1Md_T LINE L1 5590 6585 0 1 756 323 114 0 41 chr13 22521737 22521810 -97762502 + L1_Mur1 LINE L1 4315 4384 -1502 1 756 1548 119 0 0 chr13 22521793 22522045 -97762267 + L1_Mur1 LINE L1 1772 2023 -3863 1 756 7397 112 1 7 chr13 22522036 22523257 -97761055 + L1_Mur1 LINE L1 2986 4199 -1687 1 756 5103 107 88 66 chr13 22523278 22524236 -97760076 + L1_Mus2 LINE L1 5587 6565 -1 1 756 11081 75 35 54 chr13 22524244 22524998 -97759314 + Lx3A LINE L1 4120 4930 -956 1 756 426 39 0 0 chr13 22524998 22525050 -97759262 + (TAA)n Simple_repeat Simple_repeat 2 53 0 1 756 11081 75 35 54 chr13 22525050 22525547 -97758765 + Lx3A LINE L1 4931 5369 -517 1 756 1877 68 0 24 chr13 22525547 22525802 -97758510 + L1_Mus1 LINE L1 6319 6567 0 1 756 11081 98 21 24 chr13 22525802 22527434 -97756878 + Lx3A LINE L1 5370 6979 -2 1 756 4913 198 83 21 chr13 22527493 22528875 -97755437 + Lx6 LINE L1 4557 6008 -1452 1 756 676 225 28 22 chr13 22528875 22529057 -97755255 + B2_Mm2 SINE B2 1 183 -12 2 756 4221 241 73 54 chr13 22529057 22529264 -97755048 + Lx6 LINE L1 6009 6244 -1216 1 756 1169 54 20 0 chr13 22529264 22529411 -97754901 - B1_Mur4 SINE Alu 0 150 1 2 756 4221 241 73 54 chr13 22529411 22530272 -97754040 + Lx6 LINE L1 6245 7116 -344 1 756 30 69 0 0 chr13 22531048 22531106 -97753206 + AT_rich Low_complexity Low_complexity 1 58 0 2 756 1348 62 67 0 chr13 22531530 22531725 -97752587 + L1Md_F2 LINE L1 6375 6582 0 2 756 475 309 68 57 chr13 22534737 22534929 -97749383 - B3A SINE B2 -4 194 1 2 756 289 280 178 10 chr13 22535174 22535275 -97749037 + RSINE1 SINE B4 3 120 -45 2 756 333 125 0 0 chr13 22535275 22535331 -97748981 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 756 1524 220 71 48 chr13 22536163 22536884 -97747428 + L1_Mur3 LINE L1 4075 4835 -1045 2 756 5438 111 19 25 chr13 22536885 22537732 -97746580 - Lx LINE L1 -17 6637 5796 2 756 4844 164 81 99 chr13 22537761 22538922 -97745390 - MTB-int LTR MaLR -117 1141 2 2 756 1407 90 14 37 chr13 22538921 22539149 -97745163 - MTB LTR MaLR 0 400 155 2 756 4105 58 0 2 chr13 22539239 22539756 -97744556 - L1Md_F2 LINE L1 0 6582 6067 3 756 2532 39 7 0 chr13 22539757 22540065 -97744247 + L1Md_F2 LINE L1 6272 6581 -1 3 756 7182 77 4 6 chr13 22540070 22541180 -97743132 + L1_Mus1 LINE L1 5461 6567 0 3 756 22 35 0 0 chr13 22541290 22541319 -97742993 + AT_rich Low_complexity Low_complexity 1 29 0 3 756 8485 53 1 1 chr13 22542326 22543674 -97740638 - L1Md_F2 LINE L1 -488 6094 4747 3 94 1715 228 61 62 chr13 22543787 22544443 -97739869 + L1_Mur3 LINE L1 4204 4858 -1022 3 757 1641 238 54 52 chr13 22544448 22544740 -97739572 + RMER1B Other Other 494 774 -292 3 757 1321 102 16 0 chr13 22544740 22544926 -97739386 - B2_Mm2 SINE B2 -6 189 1 3 757 1641 238 54 52 chr13 22544926 22545205 -97739107 + RMER1B Other Other 775 1066 0 3 757 1959 228 30 70 chr13 22545202 22545861 -97738451 + L1_Mur3 LINE L1 4946 5578 -302 3 757 1488 286 26 20 chr13 22546122 22546621 -97737691 + Lx7 LINE L1 6481 6982 -714 3 757 473 171 0 0 chr13 22547313 22547395 -97736917 + RMER16-int LTR ERVK 5325 5406 0 3 757 2667 126 69 107 chr13 22547397 22547949 -97736363 + RMER16 LTR ERVK 3 533 0 3 757 234 0 0 0 chr13 22548028 22548054 -97736258 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 3 757 885 183 51 0 chr13 22548218 22548393 -97735919 + B2_Mm2 SINE B2 2 185 -10 4 757 284 256 63 16 chr13 22548617 22548744 -97735568 + RLTR19-int LTR ERVK 2331 2463 -3674 4 757 3748 61 2 8 chr13 22548783 22549313 -97734999 + L1_Mm LINE L1 3824 4350 -1533 4 757 32584 69 16 8 chr13 22549311 22554334 -97729978 + L1Md_F2 LINE L1 523 5585 -298 4 757 7468 75 2 4 chr13 22554335 22555332 -97728980 + L1Md_F2 LINE L1 5587 6581 -1 4 757 346 291 62 29 chr13 22555457 22555666 -97728646 + RLTR19-int LTR ERVK 2657 2872 -3265 4 757 365 216 112 86 chr13 22555750 22555902 -97728410 + RLTR19-int LTR ERVK 2904 3059 -3078 4 757 948 18 0 0 chr13 22555942 22556052 -97728260 + (CAAAA)n Simple_repeat Simple_repeat 2 111 0 4 757 201 74 0 0 chr13 22556473 22556500 -97727812 + (T)n Simple_repeat Simple_repeat 1 27 0 4 757 7519 99 12 5 chr13 22556908 22558047 -97726265 - L1_Mus3 LINE L1 0 6638 5494 4 757 3483 167 34 2 chr13 22558041 22558666 -97725646 + L1_Mus3 LINE L1 4868 5512 -371 4 757 3161 113 22 31 chr13 22559933 22560488 -97723824 + RMER17D2 LTR ERVK 1 550 -259 4 757 4593 110 3 5 chr13 22560488 22561109 -97723203 + Lx LINE L1 6034 6653 -1 4 757 38 0 0 0 chr13 22561117 22561155 -97723157 + AT_rich Low_complexity Low_complexity 1 38 0 4 757 394 200 24 0 chr13 22561167 22561252 -97723060 + MTD LTR MaLR 333 419 0 5 757 288 294 70 25 chr13 22561253 22561410 -97722902 + L1M5 LINE L1 4507 4670 -1470 5 757 350 315 16 0 chr13 22561829 22561997 -97722315 + L1M5 LINE L1 4899 5068 -1075 5 757 946 210 85 0 chr13 22563312 22563488 -97720824 - B3 SINE B2 -25 191 1 5 757 227 293 149 63 chr13 22564361 22564536 -97719776 - MIR SINE MIR -16 246 57 5 757 27 49 0 0 chr13 22567624 22567665 -97716647 + AT_rich Low_complexity Low_complexity 1 41 0 5 757 253 237 172 20 chr13 22568834 22568933 -97715379 + MTE2a LTR MaLR 20 133 -246 5 757 7468 89 6 3 chr13 22568972 22570538 -97713774 + L1_Mus1 LINE L1 4998 6567 0 5 757 285 313 236 52 chr13 22570550 22570779 -97713533 + MT2A LTR ERVL 155 425 -108 5 757 363 44 0 0 chr13 22570919 22570964 -97713348 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 757 3645 155 19 5 chr13 22571368 22571699 -97712613 - Lx2B LINE L1 -1 6999 6660 5 757 549 0 0 0 chr13 22571699 22571760 -97712552 + (TTTTG)n Simple_repeat Simple_repeat 2 62 0 6 757 3645 155 19 5 chr13 22571760 22571999 -97712313 - Lx2B LINE L1 -341 6659 6422 5 757 300 275 65 0 chr13 22572413 22572551 -97711761 - L1MA7 LINE L1 -200 6091 5945 6 757 826 80 15 0 chr13 22573384 22573521 -97710791 + (CA)n Simple_repeat Simple_repeat 2 140 0 6 757 978 9 0 0 chr13 22573885 22573996 -97710316 + (TCCCC)n Simple_repeat Simple_repeat 3 113 0 6 757 865 169 6 11 chr13 22574915 22575095 -97709217 + (TATG)n Simple_repeat Simple_repeat 2 180 0 6 757 260 280 49 41 chr13 22575918 22576041 -97708271 + RLTR6-int LTR ERV1 3666 3789 -3989 6 757 346 253 11 11 chr13 22576574 22576662 -97707650 + MER52-int LTR ERV1 5037 5124 -1967 6 757 308 330 32 20 chr13 22577116 22577412 -97706900 + MER52-int LTR ERV1 5676 5771 -1320 6 757 501 327 58 14 chr13 22577748 22577956 -97706356 + RodERV21-int LTR ERV1 2882 3098 -1893 6 757 4288 57 2 6 chr13 22578197 22578709 -97705603 - L1Md_F2 LINE L1 0 6582 6073 6 757 4178 42 8 0 chr13 22578709 22579405 -97704907 + L1Md_F2 LINE L1 5381 6081 -501 6 757 489 277 30 48 chr13 22579478 22579645 -97704667 + RNLTR23 LTR ERVK 479 642 0 6 757 1080 340 49 19 chr13 22579703 22580236 -97704076 + RodERV21-int LTR ERV1 3691 4239 -752 6 757 426 270 18 30 chr13 22580263 22580427 -97703885 + RodERV21-int LTR ERV1 4632 4793 -198 6 757 568 292 38 5 chr13 22580859 22581045 -97703267 + RLTR28B LTR ERVL 210 401 -80 7 757 408 20 0 0 chr13 22581315 22581364 -97702948 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 757 652 189 15 0 chr13 22581913 22582055 -97702257 + B1_Mm SINE Alu 3 149 0 7 757 697 190 15 0 chr13 22582055 22582260 -97702052 + GA-rich Low_complexity Low_complexity 1 207 0 7 757 258 254 354 26 chr13 22582645 22582662 -97701650 + ID_B1 SINE B4 70 219 -5 7 757 431 250 42 0 chr13 22582662 22582758 -97701554 + PB1D10 SINE Alu 13 112 -5 7 757 251 0 0 56 chr13 22583809 22583845 -97700467 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 7 757 604 294 35 30 chr13 22584251 22584454 -97699858 - B3 SINE B2 -11 205 2 7 757 1412 281 68 42 chr13 22585561 22586063 -97698249 - RLTR17 LTR ERVK -73 619 105 7 757 241 282 28 0 chr13 22586072 22586143 -97698169 - B3A SINE B2 -116 82 10 7 757 366 261 176 15 chr13 22586379 22586515 -97697797 + RSINE1 SINE B4 2 159 -6 8 757 32 26 0 0 chr13 22586524 22586563 -97697749 + AT_rich Low_complexity Low_complexity 1 39 0 8 757 413 158 28 12 chr13 22587812 22587900 -97696412 + ORR1D1 LTR MaLR 40 160 -214 8 757 907 261 125 55 chr13 22588460 22588955 -97695357 - RLTR19-int LTR ERVK -3275 2862 2333 8 757 5093 48 3 10 chr13 22589090 22589681 -97694631 - LTRIS_Mus LTR ERV1 0 587 1 8 757 342 0 0 0 chr13 22589744 22589782 -97694530 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 8 757 870 153 67 0 chr13 22589782 22589932 -97694380 - B2_Mm2 SINE B2 -34 161 2 8 757 26 50 0 0 chr13 22590143 22590183 -97694129 + AT_rich Low_complexity Low_complexity 1 40 0 8 757 252 0 0 0 chr13 22590349 22590377 -97693935 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 757 207 0 0 0 chr13 22590435 22590458 -97693854 + (CAA)n Simple_repeat Simple_repeat 2 24 0 8 757 3784 35 28 5 chr13 22590515 22590941 -97693371 + RLTR10C LTR ERVK 1 436 0 9 757 21 36 0 0 chr13 22591052 22591080 -97693232 + AT_rich Low_complexity Low_complexity 1 28 0 9 757 606 214 22 22 chr13 22591303 22591437 -97692875 - RLTR19-int LTR ERVK -4218 1304 1171 8 757 191 262 0 0 chr13 22592773 22592815 -97691497 + MIRm SINE MIR 219 260 -16 9 757 881 261 15 0 chr13 22595706 22595909 -97688403 - B3 SINE B2 -9 207 2 9 757 961 300 119 30 chr13 22597557 22597959 -97686353 - Lx7 LINE L1 -338 7358 6921 9 757 2425 267 145 7 chr13 22597962 22599342 -97684970 - Lx7 LINE L1 -1174 6522 4946 9 757 1242 239 160 9 chr13 22599344 22599844 -97684468 - RMER1B Other Other 0 1066 401 9 757 2620 225 30 18 chr13 22599836 22600510 -97683802 - Lx7 LINE L1 -1014 4866 4185 9 757 388 258 16 8 chr13 22600484 22600605 -97683707 - L1MD LINE L1 -2406 3740 3619 9 757 486 0 0 0 chr13 22600629 22600683 -97683629 + (GA)n Simple_repeat Simple_repeat 1 54 0 9 757 628 209 19 63 chr13 22600703 22600861 -97683451 - ORR1C1 LTR MaLR -227 151 1 9 757 7365 75 8 10 chr13 22601250 22601369 -97682943 - L1_Mus2 LINE L1 0 6566 6447 9 757 3278 69 5 2 chr13 22601369 22601764 -97682548 + MTA_Mm LTR MaLR 1 396 0 1 757 8271 82 8 12 chr13 22601764 22602775 -97681537 - L1_Mus2 LINE L1 -120 6446 5462 9 757 1149 76 7 0 chr13 22602775 22602920 -97681392 - B1_Mus1 SINE Alu -2 146 1 1 757 8271 119 6 21 chr13 22602920 22603731 -97680581 - L1_Mus2 LINE L1 -422 5461 4646 9 757 1243 78 33 11 chr13 22603730 22603912 -97680400 - L1_Mus2 LINE L1 -1593 4290 4105 9 757 7312 147 28 10 chr13 22603907 22605925 -97678387 + L1_Mus4 LINE L1 4883 6636 0 1 757 1775 221 69 53 chr13 22605975 22606468 -97677844 + RLTR20B3 LTR ERVK 21 521 -56 1 757 2137 227 26 32 chr13 22606986 22607130 -97677182 + Lx5 LINE L1 6139 6277 -773 1 757 3570 178 83 36 chr13 22607130 22607814 -97676498 - RMER6D LTR ERVK -4 716 1 1 757 2137 227 26 32 chr13 22607814 22607972 -97676340 + Lx5 LINE L1 6278 6426 -624 1 757 522 0 0 0 chr13 22607972 22608030 -97676282 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 757 2137 227 26 32 chr13 22608030 22608191 -97676121 + Lx5 LINE L1 6427 6599 -451 1 757 809 189 49 16 chr13 22608214 22608397 -97675915 + B2_Mm2 SINE B2 1 189 -6 1 757 2834 275 31 57 chr13 22608397 22609304 -97675008 + Lx6 LINE L1 6009 6891 -569 1 757 718 315 18 9 chr13 22609295 22609516 -97674796 + Lx6 LINE L1 6265 6487 -973 1 757 1057 216 5 0 chr13 22609521 22609720 -97674592 + Lx6 LINE L1 6917 7116 -344 1 757 187 307 18 106 chr13 22610102 22610215 -97674097 + L3 LINE CR1 2117 2219 -2270 1 757 26572 66 4 6 chr13 22610367 22614745 -97669567 - L1Md_F2 LINE L1 -8 6574 2208 1 757 973 88 216 4 chr13 22614745 22614992 -97669320 - L1Md_F2 LINE L1 -4441 1442 1148 1 757 568 285 25 49 chr13 22617086 22617289 -97667023 - B3 SINE B2 -2 214 17 1 757 617 290 5 74 chr13 22618186 22618376 -97665936 - B3A SINE B2 -1 197 21 1 757 339 331 36 10 chr13 22618539 22618731 -97665581 - RMER17C LTR ERVK -181 229 33 1 757 1983 185 74 24 chr13 22619355 22619775 -97664537 - BGLII_B LTR ERVK 0 441 1 1 757 633 238 2 2 chr13 22620039 22620173 -97664139 + B1_Mus1 SINE Alu 1 134 -15 1 757 644 257 0 0 chr13 22620284 22620428 -97663884 - B1_Mur1 SINE Alu -5 144 1 1 757 1581 263 32 47 chr13 22620801 22621518 -97662794 + RMER1B Other Other 41 892 -174 1 757 875 293 5 9 chr13 22621549 22621773 -97662539 + MTD LTR MaLR 10 232 -187 1 757 2787 47 18 3 chr13 22621830 22622171 -97662141 + MTA_Mm LTR MaLR 1 346 0 1 757 8192 56 6 1 chr13 22622173 22623239 -97661073 + MTA_Mm-int LTR MaLR 1 1071 -27 1 757 471 291 40 47 chr13 22623609 22623757 -97660555 - ETnERV2-int LTR ERVK -185 7221 7075 1 757 280 125 0 0 chr13 22623757 22623797 -97660515 + MTA_Mm-int LTR MaLR 1059 1098 0 1 757 3206 31 39 0 chr13 22623797 22624178 -97660134 + MTA_Mm LTR MaLR 1 396 0 1 757 702 232 93 24 chr13 22624329 22624620 -97659692 + L1_Mur3 LINE L1 4368 4678 -1202 1 757 22311 116 27 15 chr13 22624620 22625293 -97659019 + L1_Mus4 LINE L1 584 1265 -4618 1 757 291 85 0 0 chr13 22625293 22625340 -97658972 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 1 757 22311 163 37 12 chr13 22625340 22630603 -97653709 + L1_Mus4 LINE L1 1266 6633 -3 1 757 427 246 10 123 chr13 22630596 22630791 -97653521 + L1_Mur3 LINE L1 4665 4837 -1043 1 757 263 231 25 13 chr13 22630808 22630887 -97653425 + Lx7 LINE L1 4758 4837 -1043 1 757 1962 129 6 57 chr13 22630887 22631223 -97653089 + ORR1A2 LTR MaLR 1 319 -8 1 757 1592 244 14 9 chr13 22631226 22631660 -97652652 + Lx7 LINE L1 4832 5267 -613 1 757 471 258 102 18 chr13 22631669 22631835 -97652477 + Lx6 LINE L1 7280 7459 -1 1 757 908 163 183 5 chr13 22631897 22632088 -97652224 - URR1B DNA MER1_type 0 225 1 1 757 1220 279 104 0 chr13 22632090 22632531 -97651781 + Lx7 LINE L1 5305 5791 -89 1 757 11835 77 6 25 chr13 22632548 22634983 -97649329 + L1Md_F2 LINE L1 575 2964 -2919 1 757 222 128 0 0 chr13 22634983 22635022 -97649290 + (T)n Simple_repeat Simple_repeat 1 39 0 1 757 39237 10 0 1 chr13 22635058 22642050 -97642262 - L1Md_A LINE L1 -1 6581 1 1 757 8580 82 31 0 chr13 22642049 22643323 -97640989 + L1Md_F2 LINE L1 2950 4262 -1621 1 757 497 120 0 0 chr13 22643328 22643403 -97640909 + L1Md_F2 LINE L1 5512 5586 -297 1 757 8224 45 1 0 chr13 22643403 22644398 -97639914 + L1Md_F2 LINE L1 5587 6582 0 1 757 334 255 9 36 chr13 22644419 22644529 -97639783 + Lx7 LINE L1 5808 5914 -1782 1 757 1605 49 18 0 chr13 22644528 22644753 -97639559 - L1_Mm LINE L1 -2557 3326 3098 1 757 468 78 0 0 chr13 22645929 22645993 -97638319 - B1_Mus1 SINE Alu -83 65 2 1 757 370 270 44 22 chr13 22646178 22646269 -97638043 + B3A SINE B2 2 94 -104 1 757 21 57 0 0 chr13 22647515 22647550 -97636762 + AT_rich Low_complexity Low_complexity 1 35 0 1 757 213 132 28 42 chr13 22649105 22649176 -97635136 + T-rich Low_complexity Low_complexity 2 71 0 1 757 405 0 0 0 chr13 22651788 22651833 -97632479 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 757 4206 192 74 24 chr13 22651974 22652837 -97631475 - RMER13B LTR ERVK -2 906 1 1 757 489 79 0 0 chr13 22653011 22653074 -97631238 + B1_Mur4 SINE Alu 82 144 -6 1 757 526 312 65 7 chr13 22653829 22653984 -97630328 + B3A SINE B2 1 164 -34 1 757 183 80 0 0 chr13 22653987 22654012 -97630300 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 757 852 288 10 58 chr13 22654034 22654329 -97629983 - Lx9 LINE L1 -1006 6638 6358 1 757 1737 184 57 14 chr13 22654403 22654755 -97629557 + ORR1B2 LTR MaLR 1 367 0 1 757 287 260 7 64 chr13 22654856 22654996 -97629316 - Lx9 LINE L1 -1616 6028 5897 1 757 313 371 46 12 chr13 22655022 22655439 -97628873 + L1M2 LINE L1 4661 5091 -1052 1 757 210 118 0 0 chr13 22656657 22656691 -97627621 + (CATTA)n Simple_repeat Simple_repeat 5 38 0 1 757 357 284 0 61 chr13 22656693 22656733 -97627579 - Lx6 LINE L1 -46 7414 7380 1 757 1891 204 18 5 chr13 22656733 22657122 -97627190 + ORR1B1 LTR MaLR 1 394 0 1 757 357 284 0 61 chr13 22657122 22657246 -97627066 - Lx6 LINE L1 -81 7379 7260 1 757 835 286 30 45 chr13 22657238 22657719 -97626593 + Lx5 LINE L1 6005 6727 -733 1 757 6861 94 10 18 chr13 22657788 22659478 -97624834 - L1_Mus2 LINE L1 0 6566 4886 1 757 544 218 174 84 chr13 22660432 22660622 -97623690 - B3 SINE B2 -6 210 4 1 757 225 336 105 50 chr13 22661490 22661709 -97622603 - MIRb SINE MIR -9 253 23 1 757 613 132 8 8 chr13 22661874 22661996 -97622316 + (TA)n Simple_repeat Simple_repeat 2 123 0 1 757 363 105 0 0 chr13 22662020 22662077 -97622235 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 757 428 227 53 26 chr13 22662490 22662603 -97621709 - Lx7 LINE L1 -1877 5819 5704 1 757 2259 204 61 62 chr13 22662617 22662894 -97621418 - Lx7 LINE L1 -752 5128 4838 1 757 2079 138 3 58 chr13 22662894 22663240 -97621072 - ORR1A2 LTR MaLR 0 327 1 1 757 2259 204 61 62 chr13 22663240 22663356 -97620956 - Lx7 LINE L1 -1043 4837 4731 1 757 213 121 0 0 chr13 22663356 22663389 -97620923 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 757 2259 204 61 62 chr13 22663389 22663751 -97620561 - Lx7 LINE L1 -1150 4730 4373 1 757 916 288 4 9 chr13 22663960 22664188 -97620124 - MTD LTR MaLR -187 232 6 1 757 231 88 0 0 chr13 22664319 22664353 -97619959 + (A)n Simple_repeat Simple_repeat 1 34 0 1 757 265 305 43 86 chr13 22664627 22664767 -97619545 + RLTR41 LTR ERV1 251 384 -62 1 757 304 185 0 0 chr13 22664817 22664871 -97619441 - RMER1B Other Other -179 887 834 1 757 4232 26 76 16 chr13 22664871 22665422 -97618890 - RLTR6_Mm LTR ERV1 -70 584 1 1 757 1496 253 28 73 chr13 22665423 22666054 -97618258 - RMER1B Other Other -230 836 355 1 757 6929 48 13 61 chr13 22666478 22667416 -97616896 + RLTR13B1 LTR ERVK 1 893 0 1 757 396 312 7 14 chr13 22667416 22667562 -97616750 + B1_Mur1 SINE Alu 3 147 -2 1 757 577 275 0 0 chr13 22667668 22667799 -97616513 - B1_Mus2 SINE Alu -16 131 1 1 757 1889 178 107 10 chr13 22668057 22668459 -97615853 + BGLII_B LTR ERVK 1 441 0 1 757 37243 22 1 0 chr13 22668706 22673991 -97610321 - L1Md_T LINE L1 -2 6580 1294 1 757 1193 240 42 97 chr13 22674310 22674744 -97609568 + RMER17C LTR ERVK 1 410 0 1 757 714 227 0 78 chr13 22674909 22675100 -97609212 - RMER10B LTR ERVL 0 398 223 1 94 31180 80 40 9 chr13 22675100 22680304 -97604008 + L1Md_F3 LINE L1 221 5588 -298 1 758 7739 58 9 0 chr13 22680306 22681281 -97603031 + L1Md_F3 LINE L1 5591 6574 -13 1 758 1333 181 29 4 chr13 22681303 22681542 -97602770 - RMER10B LTR ERVL -153 245 1 1 758 29 28 0 0 chr13 22681731 22681767 -97602545 + AT_rich Low_complexity Low_complexity 1 36 0 1 758 422 257 127 14 chr13 22681954 22682096 -97602216 - RSINE1 SINE B4 -6 159 2 1 758 550 305 5 43 chr13 22682354 22682539 -97601773 + B3A SINE B2 20 197 -1 1 758 587 309 15 49 chr13 22683433 22683637 -97600675 + B3 SINE B2 18 214 -2 1 758 24 0 0 0 chr13 22684736 22684760 -97599552 + AT_rich Low_complexity Low_complexity 1 24 0 1 758 360 64 0 0 chr13 22685037 22685084 -97599228 + (TC)n Simple_repeat Simple_repeat 2 48 0 1 758 333 102 0 0 chr13 22685094 22685153 -97599159 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 758 4036 253 40 8 chr13 22688212 22689285 -97595027 - Lx6 LINE L1 -344 7116 6009 1 758 739 163 83 50 chr13 22689285 22689466 -97594846 - B2_Mm2 SINE B2 -8 187 1 1 758 308 188 29 0 chr13 22689488 22689557 -97594755 - Lx5 LINE L1 -449 6601 6531 1 758 1916 238 24 50 chr13 22689557 22690022 -97594290 + RMER6D LTR ERVK 17 469 -251 1 758 499 207 51 15 chr13 22690022 22690159 -97594153 - L1_Mur3 LINE L1 -1318 4562 4421 1 758 36562 12 0 7 chr13 22690172 22695368 -97588944 + L1Md_A LINE L1 435 5586 -297 1 758 8870 11 1 0 chr13 22695368 22696363 -97587949 + L1Md_A LINE L1 5587 6582 0 1 758 6740 66 3 2 chr13 22696386 22698160 -97586152 + L1Md_F LINE L1 338 2113 -3770 1 758 4992 50 2 2 chr13 22698160 22698779 -97585533 + L1Md_F2 LINE L1 5961 6579 -3 1 758 2837 258 55 22 chr13 22698786 22699524 -97584788 - L1_Mur3 LINE L1 -1465 4415 3645 1 758 1835 202 19 5 chr13 22699524 22699898 -97584414 + RLTR14 LTR ERV1 1 379 -3 1 758 2837 258 55 22 chr13 22699898 22700310 -97584002 - L1_Mur3 LINE L1 -2236 3644 3227 1 758 22 0 0 0 chr13 22700722 22700744 -97583568 + AT_rich Low_complexity Low_complexity 1 22 0 1 758 357 268 135 21 chr13 22700761 22700902 -97583410 - RSINE1 SINE B4 -6 159 3 1 758 4979 246 46 47 chr13 22701309 22702396 -97581916 - Lx6 LINE L1 -346 7114 6009 1 758 504 199 129 58 chr13 22702396 22702567 -97581745 - B2_Mm2 SINE B2 -9 186 4 1 758 5298 223 28 66 chr13 22702567 22705034 -97579278 - Lx6 LINE L1 -1452 6008 3700 1 758 2352 252 63 146 chr13 22705026 22706057 -97578255 - RMER1B Other Other -5 1025 150 1 758 3490 61 36 38 chr13 22706057 22706533 -97577779 + MT2C_Mm LTR ERVL 1 475 0 1 758 2352 233 28 166 chr13 22706533 22706721 -97577591 - RMER1B Other Other -816 250 63 1 758 5188 206 51 32 chr13 22706759 22706942 -97577370 - Lx6 LINE L1 -2404 3742 3522 1 758 281 26 26 0 chr13 22706942 22706980 -97577332 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 758 5188 198 49 36 chr13 22706980 22708287 -97576025 - Lx6 LINE L1 -2359 3521 2199 1 758 1691 169 85 11 chr13 22708283 22708329 -97575983 + Lx4B LINE L1 6458 6503 -555 1 758 2547 106 125 15 chr13 22708329 22708808 -97575504 + RLTR47_MM LTR ERV1 1 532 0 1 758 1691 167 181 10 chr13 22708808 22709175 -97575137 + Lx4B LINE L1 6504 6937 -121 1 758 297 75 0 0 chr13 22709256 22709296 -97575016 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1 758 1227 93 0 0 chr13 22709816 22710077 -97574235 + (TG)n Simple_repeat Simple_repeat 1 261 0 1 758 227 342 120 69 chr13 22710218 22710435 -97573877 + RMER15 LTR ERVL 337 564 -11 1 758 263 263 0 0 chr13 22710610 22710686 -97573626 - L1MA7 LINE L1 -353 5938 5863 1 758 31 58 0 0 chr13 22710823 22710875 -97573437 + AT_rich Low_complexity Low_complexity 1 52 0 1 758 204 226 0 0 chr13 22711012 22711065 -97573247 + T-rich Low_complexity Low_complexity 6 58 0 2 758 466 308 125 52 chr13 22711548 22711740 -97572572 + B3 SINE B2 4 209 -7 2 758 203 133 0 0 chr13 22711823 22711853 -97572459 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 758 21 36 0 0 chr13 22712872 22712900 -97571412 + AT_rich Low_complexity Low_complexity 1 28 0 2 758 744 12 0 0 chr13 22713205 22713290 -97571022 + (TC)n Simple_repeat Simple_repeat 2 86 0 2 758 267 122 0 0 chr13 22713290 22713338 -97570974 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 758 213 286 117 0 chr13 22715510 22715587 -97568725 - PB1D10 SINE Alu 0 117 32 2 758 1118 270 145 16 chr13 22716294 22716810 -97567502 - Lx6 LINE L1 -344 7116 6534 2 758 259 333 0 0 chr13 22716868 22716928 -97567384 - B3A SINE B2 -52 146 87 2 758 184 279 78 47 chr13 22717206 22717270 -97567042 + MIRm SINE MIR 195 260 -16 2 758 27 29 0 0 chr13 22718361 22718395 -97565917 + AT_rich Low_complexity Low_complexity 1 34 0 2 758 572 267 13 71 chr13 22719591 22719817 -97564495 + B3 SINE B2 4 216 0 2 758 333 47 0 0 chr13 22721186 22721229 -97563083 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 758 31 26 0 0 chr13 22721568 22721606 -97562706 + AT_rich Low_complexity Low_complexity 1 38 0 2 758 3663 84 10 20 chr13 22721886 22722396 -97561916 + L1Md_F2 LINE L1 6064 6568 -14 2 758 240 178 0 22 chr13 22723698 22723744 -97560568 - B1F SINE Alu 0 149 105 2 758 181 234 106 47 chr13 22724386 22724471 -97559841 + L3 LINE CR1 946 1035 -3454 2 758 2132 218 78 6 chr13 22724498 22725046 -97559266 - Lx6 LINE L1 -344 7116 6529 2 758 1584 179 46 34 chr13 22725144 22725554 -97558758 - L1_Mur3 LINE L1 -2813 3067 2653 2 758 3786 99 22 0 chr13 22725554 22726157 -97558155 + L1_Mur1 LINE L1 4273 4888 -998 2 758 1965 110 9 105 chr13 22726157 22726501 -97557811 + RLTR10E LTR ERVK 1 311 0 2 758 617 99 22 0 chr13 22726501 22726592 -97557720 + MMERVK10C-int LTR ERVK 1 93 -7488 2 758 248 241 0 18 chr13 22726592 22726647 -97557665 + RLTR27 LTR ERVK 222 275 -34 2 758 52404 84 5 14 chr13 22726647 22734068 -97550244 + MMERVK10C-int LTR ERVK 225 7581 0 2 758 1902 103 3 184 chr13 22734068 22734448 -97549864 + RLTR10E LTR ERVK 1 311 0 2 758 7601 106 7 7 chr13 22734448 22736356 -97547956 + Lx3_Mus LINE L1 4884 6788 -221 2 758 3665 44 5 2 chr13 22736375 22736810 -97547502 + RLTR10C LTR ERVK 1 436 0 2 758 2514 90 53 3 chr13 22736810 22737190 -97547122 + MMERVK10C-int LTR ERVK 1 399 -7182 2 758 22962 45 0 1 chr13 22737188 22740065 -97544247 + MMERVK10C-int LTR ERVK 870 3743 -3838 2 758 8415 33 0 0 chr13 22740058 22741079 -97543233 + MMERVK10C-int LTR ERVK 4790 5810 -1771 2 758 7765 32 0 0 chr13 22741065 22742001 -97542311 + MMERVK10C-int LTR ERVK 6646 7581 0 2 758 2911 35 185 0 chr13 22742001 22742369 -97541943 + RLTR10C LTR ERVK 1 436 0 2 758 699 186 56 6 chr13 22742369 22742531 -97541781 + Lx3_Mus LINE L1 6835 7004 -5 2 758 405 0 0 0 chr13 22743133 22743178 -97541134 + (TTA)n Simple_repeat Simple_repeat 3 47 0 2 758 13410 115 32 25 chr13 22743178 22744786 -97539526 - L1_Mus2 LINE L1 -13 6553 4904 2 758 229 153 65 48 chr13 22744786 22744848 -97539464 + RMER20A LTR ERVK 186 248 -268 2 758 13410 115 32 25 chr13 22744848 22746281 -97538031 - L1_Mus2 LINE L1 -13 4903 3431 2 758 2769 179 32 7 chr13 22746279 22746837 -97537475 - L1VL2 LINE L1 -5670 665 94 2 758 1786 197 48 93 chr13 22746836 22747352 -97536960 - L1_Mur1 LINE L1 -777 5100 4590 2 758 4994 12 5 0 chr13 22747352 22747916 -97536396 + L1Md_T LINE L1 6016 6582 0 2 758 1786 197 48 93 chr13 22747916 22748009 -97536303 - L1_Mur1 LINE L1 -1288 4589 4519 2 758 33848 77 5 6 chr13 22748018 22754403 -97529909 - L1Md_F3 LINE L1 0 6584 212 2 758 8368 182 76 24 chr13 22754404 22754724 -97529588 - L1_Mur1 LINE L1 -1350 4536 4252 2 758 333 0 37 37 chr13 22754724 22754778 -97529534 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 2 758 8368 182 76 24 chr13 22754778 22756539 -97527773 - L1_Mur1 LINE L1 -1635 4251 2346 2 758 1237 53 12 6 chr13 22756784 22756954 -97527358 + (GAAA)n Simple_repeat Simple_repeat 4 174 0 2 758 194 136 0 22 chr13 22756969 22756985 -97527327 + (TTTG)n Simple_repeat Simple_repeat 2 17 0 2 758 180 0 0 0 chr13 22756985 22757005 -97527307 + (TTGG)n Simple_repeat Simple_repeat 4 23 0 2 758 194 136 0 22 chr13 22757005 22757033 -97527279 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 758 5014 149 19 3 chr13 22757361 22758250 -97526062 - RLTR21 LTR ERVK -408 1164 262 2 758 21645 110 79 6 chr13 22758384 22762901 -97521411 - L1_Mus1 LINE L1 -2 6565 1704 2 758 1011 67 0 15 chr13 22762935 22763071 -97521241 - B1_Mus1 SINE Alu 0 148 15 2 758 775 59 73 99 chr13 22763028 22763179 -97521133 + ORR1A1 LTR MaLR 200 346 0 2 758 1005 98 25 0 chr13 22763194 22763357 -97520955 - L1_Mus1 LINE L1 -5695 921 755 2 758 928 232 27 31 chr13 22763370 22763663 -97520649 - L1_Mus1 LINE L1 -5943 673 382 2 758 1060 91 0 18 chr13 22763671 22763839 -97520473 - L1Md_F2 LINE L1 0 6582 6418 2 758 3158 42 5 0 chr13 22763893 22764279 -97520033 - MTA_Mm LTR MaLR 0 396 9 2 758 8694 60 3 0 chr13 22764283 22765378 -97518934 - MTA_Mm-int LTR MaLR 0 1098 1 2 758 1469 77 43 10 chr13 22765378 22765587 -97518725 - MTA_Mm LTR MaLR 0 400 185 2 758 3252 47 0 16 chr13 22765559 22765992 -97518320 - ORR1A1-int LTR MaLR -1366 426 1 2 758 1375 50 0 81 chr13 22765992 22766190 -97518122 - ORR1A1 LTR MaLR 0 346 165 2 758 390 332 77 9 chr13 22766946 22767271 -97517041 + L1_Mur3 LINE L1 1663 2009 -3871 2 758 1365 161 0 8 chr13 22767272 22767529 -97516783 + L1_Mur2 LINE L1 4523 4777 -1100 2 758 1676 145 117 35 chr13 22768865 22769266 -97515046 + L1_Mur2 LINE L1 4751 5184 -693 2 758 261 220 0 0 chr13 22769360 22769410 -97514902 + L1VL2 LINE L1 443 492 -5843 2 758 5515 174 46 39 chr13 22769557 22771207 -97513105 + L1VL4 LINE L1 466 2147 -1412 2 758 205 218 0 18 chr13 22771215 22771271 -97513041 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 2 758 1443 224 113 23 chr13 22771271 22771400 -97512912 + RLTR21 LTR ERVK 1097 1253 -319 2 758 203 32 0 61 chr13 22771400 22771433 -97512879 + (TATG)n Simple_repeat Simple_repeat 1 31 0 2 758 1443 224 113 23 chr13 22771433 22771469 -97512843 + RLTR21 LTR ERVK 1254 1302 -270 2 758 495 0 0 0 chr13 22771469 22771524 -97512788 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 758 1443 224 113 23 chr13 22771524 22771755 -97512557 + RLTR21 LTR ERVK 1303 1529 -43 2 758 24 53 0 0 chr13 22771818 22771856 -97512456 + AT_rich Low_complexity Low_complexity 1 38 0 2 758 876 85 57 71 chr13 22772121 22772261 -97512051 - B1_Mus1 SINE Alu -9 139 2 2 758 572 336 50 24 chr13 22772265 22772606 -97511706 - L1M2 LINE L1 -1144 4999 4650 2 758 265 276 0 61 chr13 22772635 22772766 -97511546 + Lx9 LINE L1 5906 6028 -1616 2 758 1611 212 67 0 chr13 22772872 22773216 -97511096 - ORR1B2 LTR MaLR 0 367 1 2 758 617 351 16 23 chr13 22773304 22773561 -97510751 + Lx9 LINE L1 6374 6628 -1016 2 758 325 203 20 53 chr13 22773562 22773713 -97510599 + (CAAA)n Simple_repeat Simple_repeat 2 147 0 2 758 566 292 77 66 chr13 22773808 22773823 -97510489 - B3 SINE B2 -19 197 183 2 758 447 68 0 0 chr13 22773823 22773882 -97510430 + (TA)n Simple_repeat Simple_repeat 2 60 0 2 758 566 292 77 66 chr13 22773882 22773902 -97510410 - B3 SINE B2 -34 182 174 2 758 279 0 0 0 chr13 22773902 22773933 -97510379 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 758 566 292 77 66 chr13 22773933 22774079 -97510233 - B3 SINE B2 -43 173 14 2 758 468 299 28 7 chr13 22774197 22774342 -97509970 + B1_Mur1 SINE Alu 1 148 -1 2 758 545 296 0 0 chr13 22774453 22774578 -97509734 - B1_Mus2 SINE Alu -16 131 7 2 758 1869 181 90 22 chr13 22774852 22775265 -97509047 + BGLII_B LTR ERVK 1 441 0 2 758 1178 249 27 77 chr13 22775841 22776242 -97508070 + RMER17C LTR ERVK 1 381 -29 2 758 243 242 10 78 chr13 22776357 22776427 -97507885 - L1MA7 LINE L1 -345 5946 5880 2 758 2052 161 30 40 chr13 22776427 22776829 -97507483 - RMER10B LTR ERVL 0 398 1 2 758 243 242 10 78 chr13 22776829 22776861 -97507451 - L1MA7 LINE L1 -412 5879 5851 2 758 30 27 0 0 chr13 22777199 22777236 -97507076 + AT_rich Low_complexity Low_complexity 1 37 0 2 758 433 230 146 35 chr13 22777245 22777389 -97506923 - RSINE1 SINE B4 -4 161 2 2 758 462 319 11 51 chr13 22777651 22777826 -97506486 + B3A SINE B2 24 191 -7 2 758 243 0 0 0 chr13 22778737 22778764 -97505548 + (TTTTA)n Simple_repeat Simple_repeat 5 31 0 2 758 438 276 10 55 chr13 22778815 22779080 -97505232 - ETnERV2-int LTR ERVK -5021 787 687 2 758 1160 149 0 71 chr13 22779131 22779355 -97504957 - ETnERV2-int LTR ERVK -6892 514 307 2 758 5085 102 43 1 chr13 22779357 22780140 -97504172 + L1_Mm LINE L1 4947 5762 -121 2 758 601 302 3 20 chr13 22780144 22780441 -97503871 - ETnERV2-int LTR ERVK -5560 1693 1450 2 758 760 269 0 0 chr13 22780624 22780821 -97503491 - ETnERV2-int LTR ERVK -6024 1229 1033 2 758 2091 72 41 62 chr13 22780861 22781200 -97503112 + IAPLTR1a_Mm LTR ERVK 1 332 -5 2 758 568 239 99 19 chr13 22781833 22781995 -97502317 - ETnERV2-int LTR ERVK -7231 175 1 2 758 407 219 69 50 chr13 22782004 22782046 -97502266 + RLTR13D4 LTR ERVK 931 973 -60 2 758 1977 131 93 34 chr13 22782046 22782432 -97501880 - RLTR9E LTR ERVK 0 409 1 2 758 407 219 69 50 chr13 22782432 22782490 -97501822 + RLTR13D4 LTR ERVK 974 1033 0 2 758 433 313 19 125 chr13 22782493 22782701 -97501611 + B3 SINE B2 29 214 -2 2 758 207 0 0 0 chr13 22784134 22784157 -97500155 + (TC)n Simple_repeat Simple_repeat 2 24 0 2 758 444 37 0 0 chr13 22784157 22784210 -97500102 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 758 423 38 0 0 chr13 22784210 22784262 -97500050 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 758 4094 253 32 13 chr13 22787158 22787903 -97496409 - Lx6 LINE L1 -344 7116 6350 2 758 3015 54 51 0 chr13 22787903 22788294 -97496018 + RLTR10A LTR ERVK 1 411 0 2 758 4094 253 32 13 chr13 22788294 22788635 -97495677 - Lx6 LINE L1 -1111 6349 6009 2 758 806 154 74 40 chr13 22788635 22788811 -97495501 - B2_Mm2 SINE B2 -9 186 5 2 758 1419 211 21 18 chr13 22788839 22789167 -97495145 - Lx5 LINE L1 -451 6599 6271 2 758 1215 209 0 0 chr13 22789168 22789388 -97494924 + RMER6D LTR ERVK 1 220 -500 2 758 1013 119 0 20 chr13 22789391 22789537 -97494775 + B1_Mus1 SINE Alu 5 147 -1 2 758 384 123 0 0 chr13 22789538 22789611 -97494701 + (A)n Simple_repeat Simple_repeat 1 73 0 2 758 3655 89 19 0 chr13 22789619 22790134 -97494178 + Lx3_Mus LINE L1 6297 6821 -188 2 758 2230 144 34 56 chr13 22790141 22790552 -97493760 - RLTR9D LTR ERVK -1 402 1 2 758 342 153 27 14 chr13 22790553 22790626 -97493686 - ETnERV2-int LTR ERVK -2 7404 7331 2 758 12766 148 7 8 chr13 22790838 22793087 -97491225 - ETnERV2-int LTR ERVK -981 6425 4231 2 758 2018 311 58 32 chr13 22793086 22794344 -97489968 - ETnERV2-int LTR ERVK -2567 3600 2310 2 758 3765 91 30 14 chr13 22794375 22794945 -97489367 - RLTR13D1 LTR ERVK 0 806 228 2 758 2913 148 39 28 chr13 22794919 22795456 -97488856 - RLTR13D1 LTR ERVK -359 543 1 2 758 5636 271 25 15 chr13 22795463 22797664 -97486648 - ETnERV2-int LTR ERVK -3890 2277 118 2 758 1120 88 0 13 chr13 22797716 22797865 -97486447 - B1_Mm SINE Alu 0 147 1 2 758 5009 70 0 5 chr13 22797865 22798525 -97485787 + L1Md_F2 LINE L1 5926 6582 0 2 758 2523 128 28 10 chr13 22798687 22799082 -97485230 - RLTR9D LTR ERVK -1 402 1 2 758 1011 146 0 5 chr13 22799082 22799268 -97485044 + Lx3_Mus LINE L1 6816 7000 -9 2 758 1374 118 15 0 chr13 22799295 22799498 -97484814 + ORR1A1 LTR MaLR 141 346 0 2 758 13177 69 16 2 chr13 22799498 22801264 -97483048 + ORR1A1-int LTR MaLR 1 1792 0 2 758 2076 94 70 12 chr13 22801264 22801587 -97482725 + ORR1A1 LTR MaLR 1 358 -12 2 758 481 267 22 30 chr13 22801654 22801789 -97482523 - MTE2b LTR MaLR -57 322 189 2 758 362 316 0 29 chr13 22802002 22802139 -97482173 + Charlie21a DNA MER1_type 378 510 -703 2 758 1431 63 16 0 chr13 22802139 22802328 -97481984 + B2_Mm2 SINE B2 2 193 -2 2 758 916 210 77 46 chr13 22802342 22802627 -97481685 + RMER6D LTR ERVK 207 500 -220 2 758 3165 235 65 50 chr13 22802627 22803512 -97480800 - L1_Mur3 LINE L1 -1341 4539 3626 2 758 1924 190 5 13 chr13 22803512 22803891 -97480421 + RLTR14 LTR ERV1 4 379 -3 2 758 3165 235 65 50 chr13 22803891 22804391 -97479921 - L1_Mur3 LINE L1 -2255 3625 3133 2 758 745 318 51 11 chr13 22804402 22804859 -97479453 - RMER1B Other Other -485 857 65 3 758 21 0 0 0 chr13 22805579 22805600 -97478712 + AT_rich Low_complexity Low_complexity 1 21 0 3 758 21 0 0 0 chr13 22805717 22805738 -97478574 + AT_rich Low_complexity Low_complexity 1 21 0 3 758 1171 68 0 7 chr13 22805738 22805886 -97478426 - B1_Mus1 SINE Alu -1 147 1 3 758 33 0 0 0 chr13 22805917 22805950 -97478362 + AT_rich Low_complexity Low_complexity 1 33 0 3 758 480 235 135 35 chr13 22805957 22806098 -97478214 - RSINE1 SINE B4 0 165 11 3 94 4566 252 63 34 chr13 22806513 22806858 -97477454 - Lx6 LINE L1 -346 7114 6752 3 759 978 9 0 0 chr13 22806858 22806969 -97477343 + (GAA)n Simple_repeat Simple_repeat 2 112 0 3 759 4566 252 63 34 chr13 22806969 22807668 -97476644 - Lx6 LINE L1 -709 6751 6012 3 759 588 181 114 51 chr13 22807668 22807843 -97476469 - B2_Mm2 SINE B2 -9 186 1 3 759 5617 206 29 32 chr13 22807843 22809407 -97474905 - Lx6 LINE L1 -1449 6011 4344 3 759 2610 135 5 2 chr13 22809407 22809814 -97474498 - Lx3A LINE L1 -5 6976 6569 3 759 4623 231 172 29 chr13 22809814 22810302 -97474010 - Lx6 LINE L1 -1543 4343 3706 3 759 2562 254 12 179 chr13 22810296 22811505 -97472807 - RMER1B Other Other -4 1062 55 3 759 5191 195 32 65 chr13 22811569 22811979 -97472333 - L1_Mur3 LINE L1 -2187 3693 3309 3 759 4720 105 8 52 chr13 22811979 22812765 -97471547 - RMER17A LTR ERVK 0 751 1 3 759 5191 195 32 65 chr13 22812765 22813900 -97470412 - L1_Mur3 LINE L1 -2572 3308 2199 3 759 298 130 0 0 chr13 22813896 22813942 -97470370 + Lx4B LINE L1 6458 6503 -555 3 759 2264 93 139 67 chr13 22813942 22814438 -97469874 + RLTR47_MM LTR ERV1 1 532 0 3 759 348 125 0 0 chr13 22814539 22814603 -97469709 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 759 239 202 64 92 chr13 22815124 22815233 -97469079 - L1MA7 LINE L1 -353 5938 5833 3 759 24 53 0 0 chr13 22815537 22815575 -97468737 + AT_rich Low_complexity Low_complexity 1 38 0 3 759 369 331 72 56 chr13 22816058 22816097 -97468215 + B3 SINE B2 4 40 -176 3 759 7267 68 11 18 chr13 22816097 22817078 -97467234 + L1Md_F2 LINE L1 5608 6581 -1 3 759 369 331 72 56 chr13 22817078 22817233 -97467079 + B3 SINE B2 41 201 -15 3 759 999 25 0 0 chr13 22817321 22817439 -97466873 + (TC)n Simple_repeat Simple_repeat 1 118 0 3 759 21 36 0 0 chr13 22818459 22818487 -97465825 + AT_rich Low_complexity Low_complexity 1 28 0 3 759 417 70 0 0 chr13 22818790 22818847 -97465465 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 759 471 82 0 0 chr13 22818850 22818923 -97465389 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 759 34 42 0 0 chr13 22821096 22821144 -97463168 + AT_rich Low_complexity Low_complexity 1 48 0 3 759 1161 268 169 27 chr13 22821920 22822441 -97461871 - Lx6 LINE L1 -344 7116 6522 3 759 598 311 14 0 chr13 22822481 22822629 -97461683 - B3A SINE B2 -48 150 1 3 759 297 0 0 0 chr13 22823481 22823514 -97460798 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 3 759 1056 105 0 0 chr13 22823515 22823658 -97460654 - B1_Mus1 SINE Alu -4 144 2 3 759 184 279 78 47 chr13 22824214 22824278 -97460034 + MIRm SINE MIR 195 260 -16 3 759 1071 96 7 7 chr13 22824357 22824504 -97459808 - B1_Mus1 SINE Alu 0 148 2 3 759 7269 83 4 1 chr13 22825731 22827420 -97456892 + L1_Mus1 LINE L1 4874 6567 0 3 759 550 267 13 71 chr13 22828508 22828734 -97455578 + B3 SINE B2 4 216 0 3 759 354 45 0 0 chr13 22830127 22830171 -97454141 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 3 759 21 0 0 0 chr13 22830499 22830520 -97453792 + AT_rich Low_complexity Low_complexity 1 21 0 3 759 35509 45 36 1 chr13 22831712 22836901 -97447411 - L1Md_F3 LINE L1 0 6584 1203 3 759 4226 170 23 25 chr13 22836879 22837734 -97446578 - L1Md_F3 LINE L1 -5458 1266 413 3 759 2039 215 76 5 chr13 22837799 22838247 -97446065 + Lx6 LINE L1 6637 7116 -344 3 759 2750 253 56 8 chr13 22838700 22839453 -97444859 - Lx6 LINE L1 -634 6826 6063 3 759 189 0 0 0 chr13 22839453 22839474 -97444838 + (CATGT)n Simple_repeat Simple_repeat 3 23 0 3 759 744 207 77 22 chr13 22839496 22839679 -97444633 - B2_Mm2 SINE B2 -2 193 1 3 759 789 199 0 26 chr13 22839822 22839977 -97444335 - RMER1B Other Other -198 868 718 3 759 3632 147 22 11 chr13 22839977 22840614 -97443698 - RMER17D2 LTR ERVK 0 809 166 3 759 2685 136 42 23 chr13 22840614 22841087 -97443225 + RLTR45 LTR ERVK 1 482 0 3 759 4938 78 35 18 chr13 22841087 22841767 -97442545 + RLTR45-int LTR ERVK 1 692 -6552 3 759 1147 16 0 0 chr13 22842124 22842250 -97442062 + RLTR45-int LTR ERVK 693 818 -6426 3 759 434 273 28 28 chr13 22842459 22842602 -97441710 + RNERVK23-int LTR ERVK 6195 6337 -1880 3 759 2751 44 0 0 chr13 22842973 22843293 -97441019 + RLTR45-int LTR ERVK 1329 1648 -5596 3 759 991 321 33 29 chr13 22843382 22843901 -97440411 + RNERVK23-int LTR ERVK 7129 7649 -568 3 759 7110 46 58 0 chr13 22843869 22844729 -97439583 + RLTR45-int LTR ERVK 6331 7240 -4 3 759 2846 122 46 44 chr13 22844732 22845213 -97439099 + RLTR45 LTR ERVK 1 482 0 3 759 1244 99 0 6 chr13 22845213 22845385 -97438927 - RMER17D2 LTR ERVK -638 171 1 3 759 1014 259 109 73 chr13 22845385 22845781 -97438531 - RMER1B Other Other -343 723 314 3 759 1657 186 47 37 chr13 22845830 22846237 -97438075 - L1_Mur3 LINE L1 -2817 3063 2653 3 759 2297 137 50 13 chr13 22846261 22846731 -97437581 - L1_Mur2 LINE L1 -1898 3985 3427 3 759 2602 182 88 8 chr13 22846723 22847249 -97437063 - L1VL2 LINE L1 -5670 665 98 3 759 8996 182 23 52 chr13 22847237 22849258 -97435054 - L1_Mur2 LINE L1 -759 5118 3156 3 759 272 220 17 0 chr13 22849265 22849324 -97434988 - RLTR21 LTR ERVK -1512 60 1 3 759 234 263 12 62 chr13 22850086 22850167 -97434145 + MTC LTR MaLR 1 77 -344 3 759 690 311 73 6 chr13 22850173 22850503 -97433809 + L1_Mur3 LINE L1 1660 2011 -3869 3 759 1323 161 28 16 chr13 22850502 22850754 -97433558 + L1_Mur2 LINE L1 4523 4777 -1100 3 759 280 250 0 14 chr13 22851162 22851231 -97433081 - L1VL4 LINE L1 -5676 626 559 3 759 1619 226 8 33 chr13 22851231 22851369 -97432943 + RLTR21 LTR ERVK 1154 1288 -284 3 759 207 0 0 0 chr13 22851369 22851392 -97432920 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 759 1619 226 8 33 chr13 22851392 22851642 -97432670 + RLTR21 LTR ERVK 1289 1532 -40 3 759 917 92 57 71 chr13 22851998 22852139 -97432173 - B1_Mus1 SINE Alu -9 139 1 3 759 302 340 56 27 chr13 22852146 22852484 -97431828 - L1M2 LINE L1 -1144 4999 4652 3 759 263 269 69 69 chr13 22852515 22852659 -97431653 + Lx9 LINE L1 5905 6048 -1596 3 759 298 381 48 57 chr13 22852683 22852752 -97431560 + Lx9 LINE L1 6074 6136 -1337 3 759 1812 204 67 0 chr13 22852752 22853096 -97431216 - ORR1B2 LTR MaLR 0 367 1 3 759 757 337 52 31 chr13 22853096 22853452 -97430860 + Lx9 LINE L1 6137 6638 -1006 3 759 344 221 39 45 chr13 22853452 22853608 -97430704 + A-rich Low_complexity Low_complexity 2 156 0 3 759 226 209 0 0 chr13 22853721 22853764 -97430548 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 759 550 298 50 12 chr13 22853764 22853924 -97430388 - B3 SINE B2 -46 170 5 3 759 620 289 0 0 chr13 22854033 22854175 -97430137 + B1_Mur1 SINE Alu 1 142 -7 3 759 642 229 0 30 chr13 22854296 22854431 -97429881 - B1_Mus2 SINE Alu -16 131 1 3 759 2063 181 104 10 chr13 22854672 22855075 -97429237 + BGLII_B LTR ERVK 1 441 0 3 759 1172 249 51 58 chr13 22855641 22856054 -97428258 + RMER17C LTR ERVK 1 410 0 3 759 662 244 0 67 chr13 22856218 22856398 -97427914 - RMER10B LTR ERVL 0 398 231 3 759 7177 69 2 10 chr13 22856399 22857365 -97426947 - L1_Mm LINE L1 -3236 2647 1690 3 759 7348 74 18 5 chr13 22857365 22858289 -97426023 + L1Md_F2 LINE L1 5647 6582 0 3 759 1368 195 31 8 chr13 22858309 22858567 -97425745 - RMER10B LTR ERVL -134 264 1 3 759 30 27 0 0 chr13 22858759 22858796 -97425516 + AT_rich Low_complexity Low_complexity 1 37 0 3 759 30 27 0 0 chr13 22858939 22858976 -97425336 + AT_rich Low_complexity Low_complexity 1 37 0 3 759 448 274 122 14 chr13 22858979 22859127 -97425185 - RSINE1 SINE B4 0 165 2 3 759 494 345 6 17 chr13 22859384 22859558 -97424754 + B3A SINE B2 20 191 -7 3 759 189 0 0 0 chr13 22860459 22860480 -97423832 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 3 759 1254 202 29 96 chr13 22860532 22861070 -97423242 - ETnERV2-int LTR ERVK -5021 787 285 3 759 5307 108 52 0 chr13 22861073 22861848 -97422464 + L1_Mm LINE L1 4948 5762 -121 3 759 744 295 9 24 chr13 22861852 22862149 -97422163 - ETnERV2-int LTR ERVK -5521 1732 1450 3 759 893 310 43 6 chr13 22862311 22862636 -97421676 - ETnERV2-int LTR ERVK -6002 1251 915 3 759 645 239 99 19 chr13 22863195 22863357 -97420955 - ETnERV2-int LTR ERVK -7231 175 1 3 759 412 219 69 50 chr13 22863366 22863408 -97420904 + RLTR13D4 LTR ERVK 931 973 -60 3 759 2154 131 93 34 chr13 22863408 22863794 -97420518 - RLTR9E LTR ERVK 0 409 1 3 759 412 219 69 50 chr13 22863794 22863852 -97420460 + RLTR13D4 LTR ERVK 974 1033 0 3 759 428 319 20 103 chr13 22863855 22864058 -97420254 + B3 SINE B2 29 214 -2 3 759 423 0 0 0 chr13 22865493 22865540 -97418772 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 759 627 14 0 0 chr13 22865540 22865611 -97418701 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 759 216 67 0 0 chr13 22865611 22865641 -97418671 + (GA)n Simple_repeat Simple_repeat 2 31 0 3 759 4494 255 32 13 chr13 22868526 22869282 -97415030 - Lx6 LINE L1 -333 7127 6350 3 759 3203 54 51 0 chr13 22869282 22869673 -97414639 + RLTR10A LTR ERVK 1 411 0 3 759 4494 255 32 13 chr13 22869673 22870014 -97414298 - Lx6 LINE L1 -1111 6349 6009 3 759 890 154 74 40 chr13 22870014 22870190 -97414122 - B2_Mm2 SINE B2 -9 186 5 3 759 1545 211 21 18 chr13 22870218 22870546 -97413766 - Lx5 LINE L1 -451 6599 6271 3 759 1178 218 0 0 chr13 22870547 22870767 -97413545 + RMER6D LTR ERVK 1 220 -500 3 759 920 115 0 8 chr13 22870769 22870900 -97413412 + B1_Mm SINE Alu 18 147 0 3 759 261 95 48 0 chr13 22870900 22870963 -97413349 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 3 759 3854 89 21 0 chr13 22870978 22871492 -97412820 + Lx3_Mus LINE L1 6297 6821 -188 3 759 2418 139 34 56 chr13 22871499 22871910 -97412402 - RLTR9D LTR ERVK -1 402 1 3 759 435 122 27 13 chr13 22871910 22871985 -97412327 - ETnERV2-int LTR ERVK 0 7406 7331 3 759 14441 199 27 18 chr13 22872197 22875550 -97408762 - ETnERV2-int LTR ERVK -981 6425 2310 3 759 3855 88 24 14 chr13 22875581 22876154 -97408158 - RLTR13D1 LTR ERVK 0 806 228 3 759 2919 148 32 27 chr13 22876138 22876665 -97407647 - RLTR13D1 LTR ERVK -372 530 1 3 759 6240 272 32 19 chr13 22876672 22878870 -97405442 - ETnERV2-int LTR ERVK -3890 2277 118 3 759 1180 92 0 0 chr13 22878900 22879042 -97405270 - B1_Mm SINE Alu -5 142 1 3 759 5200 65 19 5 chr13 22879042 22879690 -97404622 + L1Md_F2 LINE L1 5926 6582 0 3 759 2669 136 15 15 chr13 22879852 22880254 -97404058 - RLTR9D LTR ERVK -1 402 1 3 759 962 148 16 11 chr13 22880254 22880438 -97403874 + Lx3_Mus LINE L1 6816 7000 -9 3 759 1286 93 0 0 chr13 22880465 22880637 -97403675 + ORR1A1 LTR MaLR 141 312 -34 3 759 3347 94 2 2 chr13 22880636 22881105 -97403207 + ORR1A1-int LTR MaLR 1324 1792 0 3 759 2061 80 69 0 chr13 22881105 22881393 -97402919 + ORR1A1 LTR MaLR 1 308 -38 3 759 506 262 23 33 chr13 22881494 22881651 -97402661 - MTE2b LTR MaLR -56 323 147 4 759 343 316 0 36 chr13 22881844 22881982 -97402330 + Charlie21a DNA MER1_type 378 510 -703 4 759 1510 68 16 0 chr13 22881982 22882172 -97402140 + B2_Mm2 SINE B2 2 194 -1 4 759 902 217 77 46 chr13 22882186 22882471 -97401841 + RMER6D LTR ERVK 207 500 -220 4 759 3757 236 67 46 chr13 22882471 22883350 -97400962 - L1_Mur3 LINE L1 -1341 4539 3626 4 759 2102 188 5 16 chr13 22883350 22883733 -97400579 + RLTR14 LTR ERV1 1 379 -3 4 759 3757 236 67 46 chr13 22883733 22884233 -97400079 - L1_Mur3 LINE L1 -2255 3625 3131 4 759 858 314 55 12 chr13 22884242 22884698 -97399614 - RMER1B Other Other -485 857 65 4 759 21 0 0 0 chr13 22885419 22885440 -97398872 + AT_rich Low_complexity Low_complexity 1 21 0 4 759 21 0 0 0 chr13 22885557 22885578 -97398734 + AT_rich Low_complexity Low_complexity 1 21 0 4 759 1286 54 0 0 chr13 22885578 22885726 -97398586 - B1_Mus1 SINE Alu 0 148 1 4 759 31 0 0 0 chr13 22885758 22885789 -97398523 + AT_rich Low_complexity Low_complexity 1 31 0 4 759 473 231 143 23 chr13 22885806 22885939 -97398373 - RSINE1 SINE B4 -6 159 11 4 759 3429 271 74 14 chr13 22886354 22886701 -97397611 - Lx6 LINE L1 -346 7114 6740 4 759 1599 6 0 0 chr13 22886701 22886881 -97397431 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 759 3429 271 74 14 chr13 22886881 22887556 -97396756 - Lx6 LINE L1 -721 6739 6030 4 759 195 42 0 0 chr13 22887611 22887635 -97396677 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 4 759 535 222 129 0 chr13 22887640 22887782 -97396530 - B2_Mm2 SINE B2 -45 171 1 4 759 6407 200 18 48 chr13 22887782 22889337 -97394975 - Lx6 LINE L1 -1437 6023 4335 4 759 2605 134 5 2 chr13 22889337 22889741 -97394571 - Lx3A LINE L1 -8 6973 6569 4 759 6166 211 48 189 chr13 22889741 22891925 -97392387 - Lx6 LINE L1 -1389 4491 3309 4 759 4692 101 20 34 chr13 22891925 22892687 -97391625 - RMER17A LTR ERVK 0 751 1 4 759 5311 213 14 238 chr13 22892687 22893829 -97390483 - Lx6 LINE L1 -2572 3308 2199 4 759 298 130 0 0 chr13 22893825 22893871 -97390441 + Lx4B LINE L1 6458 6503 -555 4 759 2190 102 138 76 chr13 22893871 22894372 -97389940 + RLTR47_MM LTR ERV1 1 532 0 4 759 516 116 0 0 chr13 22894473 22894559 -97389753 + (TG)n Simple_repeat Simple_repeat 2 87 0 4 759 229 214 62 88 chr13 22895072 22895185 -97389127 - L1MA7 LINE L1 -349 5942 5833 4 759 35 24 0 0 chr13 22895489 22895531 -97388781 + AT_rich Low_complexity Low_complexity 1 42 0 4 759 370 337 72 56 chr13 22896014 22896053 -97388259 + B3 SINE B2 4 40 -176 4 759 7040 68 20 30 chr13 22896053 22897036 -97387276 + L1Md_F2 LINE L1 5608 6581 -1 4 759 370 337 72 56 chr13 22897036 22897191 -97387121 + B3 SINE B2 41 201 -15 4 759 633 27 0 0 chr13 22897279 22897354 -97386958 + (TC)n Simple_repeat Simple_repeat 2 76 0 4 759 21 36 0 0 chr13 22898355 22898383 -97385929 + AT_rich Low_complexity Low_complexity 1 28 0 4 759 35 41 0 0 chr13 22900898 22900947 -97383365 + AT_rich Low_complexity Low_complexity 1 49 0 4 759 768 259 144 20 chr13 22901703 22902202 -97382110 - Lx6 LINE L1 -344 7116 6519 4 759 543 318 14 0 chr13 22902239 22902387 -97381925 - B3A SINE B2 -48 150 1 4 759 486 49 0 0 chr13 22903241 22903302 -97381010 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 4 759 1060 105 0 0 chr13 22903303 22903446 -97380866 - B1_Mus1 SINE Alu -4 144 2 4 759 1106 43 0 0 chr13 22903663 22903801 -97380511 - MMETn-int LTR ERVK -4273 571 434 4 759 1626 43 0 0 chr13 22903804 22904015 -97380297 + MMETn-int LTR ERVK 544 754 -4090 4 759 331 23 0 0 chr13 22904019 22904062 -97380250 + MMETn-int LTR ERVK 1124 1166 -3678 4 759 3431 42 2 0 chr13 22904059 22904488 -97379824 - MMETn-int LTR ERVK -4414 430 1 4 759 2692 47 0 0 chr13 22904488 22904810 -97379502 - RLTRETN_Mm LTR ERVK 0 322 1 4 759 577 279 0 13 chr13 22904859 22905008 -97379304 + B1_Mur1 SINE Alu 1 147 -2 4 759 625 244 0 0 chr13 22905115 22905246 -97379066 - B1_Mus2 SINE Alu -16 131 1 4 759 1912 178 104 10 chr13 22905497 22905900 -97378412 + BGLII_B LTR ERVK 1 441 0 4 759 1266 244 51 58 chr13 22906465 22906878 -97377434 + RMER17C LTR ERVK 1 410 0 4 759 650 238 0 72 chr13 22907042 22907223 -97377089 - RMER10B LTR ERVL 0 398 231 4 759 4514 73 5 0 chr13 22907227 22907880 -97376432 - L1_Mm LINE L1 -3239 2644 1989 4 759 3057 84 31 90 chr13 22907880 22908392 -97375920 + RLTR45 LTR ERVK 1 482 0 4 759 3929 87 107 16 chr13 22908392 22909026 -97375286 + RLTR45-int LTR ERVK 1 692 -6552 4 759 1095 43 0 0 chr13 22909326 22909464 -97374848 + RLTR45-int LTR ERVK 681 818 -6426 4 759 11458 30 50 4 chr13 22910247 22912054 -97372258 + RLTR45-int LTR ERVK 1322 3212 -4032 4 759 3808 78 30 31 chr13 22912024 22912632 -97371680 + RLTR45-int LTR ERVK 3380 3986 -3258 4 759 16930 46 15 3 chr13 22912625 22914779 -97369533 + RLTR45-int LTR ERVK 5065 7244 0 4 759 3244 87 43 7 chr13 22914779 22915244 -97369068 + RLTR45 LTR ERVK 1 482 0 4 759 2092 70 0 32 chr13 22915244 22915556 -97368756 - L1_Mm LINE L1 -3889 1994 1693 4 759 6926 69 19 6 chr13 22915559 22916473 -97367839 + L1Md_F2 LINE L1 5647 6572 -10 4 759 1352 199 31 8 chr13 22916496 22916754 -97367558 - RMER10B LTR ERVL -134 264 1 4 759 30 27 0 0 chr13 22916946 22916983 -97367329 + AT_rich Low_complexity Low_complexity 1 37 0 4 759 24 32 0 0 chr13 22917132 22917163 -97367149 + AT_rich Low_complexity Low_complexity 1 31 0 4 759 457 275 169 28 chr13 22917172 22917314 -97366998 - RSINE1 SINE B4 -2 163 2 4 759 541 348 5 16 chr13 22917561 22917745 -97366567 + B3A SINE B2 10 191 -7 4 759 23 54 0 0 chr13 22918416 22918453 -97365859 + AT_rich Low_complexity Low_complexity 1 37 0 4 759 530 298 29 35 chr13 22918654 22918828 -97365484 + B3 SINE B2 29 201 -15 4 759 22 0 0 0 chr13 22919952 22919974 -97364338 + AT_rich Low_complexity Low_complexity 1 22 0 4 759 474 18 0 0 chr13 22920284 22920339 -97363973 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 759 351 0 0 0 chr13 22920339 22920377 -97363935 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 759 2291 72 3 59 chr13 22921393 22921734 -97362578 + RLTRETN_Mm LTR ERVK 1 322 0 4 759 2799 273 40 12 chr13 22923383 22924449 -97359863 - Lx6 LINE L1 -344 7116 5996 4 759 4213 84 0 0 chr13 22924451 22925007 -97359305 - L1_Mus1 LINE L1 -1 6566 6011 4 759 8031 121 18 8 chr13 22925007 22926355 -97357957 - L1_Mm LINE L1 -615 5268 3908 4 759 9225 75 15 8 chr13 22926351 22927195 -97357117 + L1Md_F2 LINE L1 4256 5116 -767 4 759 2960 40 0 0 chr13 22927195 22927541 -97356771 - ORR1A0 LTR MaLR 0 346 1 4 759 12643 52 71 6 chr13 22927542 22929223 -97355089 - ORR1A0-int LTR MaLR -1 1791 1 4 759 2984 26 6 0 chr13 22929223 22929567 -97354745 - ORR1A0 LTR MaLR 0 346 1 4 759 9225 75 15 8 chr13 22929567 22930040 -97354272 + L1Md_F2 LINE L1 5117 5585 -298 4 759 7673 72 6 2 chr13 22930041 22931032 -97353280 + L1Md_F2 LINE L1 5588 6582 0 4 759 6705 102 11 0 chr13 22931066 22932601 -97351711 + L1_Mus2 LINE L1 5016 6565 -1 4 759 1196 221 11 14 chr13 22932635 22932915 -97351397 + RMER16-int LTR ERVK 1286 1564 -3842 4 759 7284 170 72 49 chr13 22932934 22935379 -97348933 + RMER16-int LTR ERVK 1677 6205 -1201 4 759 272 284 187 75 chr13 22935943 22936043 -97348269 + RLTR9A LTR ERVK 1 108 -260 4 759 1866 82 0 12 chr13 22936043 22936302 -97348010 - L1Md_F2 LINE L1 0 6582 6327 4 759 272 284 187 75 chr13 22936302 22936532 -97347780 + RLTR9A LTR ERVK 109 368 0 4 760 403 216 14 0 chr13 22937950 22938017 -97346295 - RMER21B LTR ERV1 -10 832 765 4 760 3730 200 49 137 chr13 22938017 22938322 -97345990 - RMER21A LTR ERV1 0 947 705 4 760 207 0 0 0 chr13 22938322 22938345 -97345967 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 760 3730 200 49 137 chr13 22938345 22939077 -97345235 - RMER21A LTR ERV1 -243 704 1 4 760 696 157 15 69 chr13 22939221 22939351 -97344961 - ORR1A3-int LTR MaLR -367 1596 1474 4 760 3568 134 36 17 chr13 22939837 22940427 -97343885 + MT2B LTR ERVL 1 601 0 4 760 836 264 109 40 chr13 22940519 22940795 -97343517 - MTD LTR MaLR -20 399 105 4 760 1677 244 44 15 chr13 22940822 22941229 -97343083 + MTD LTR MaLR 1 419 0 4 760 316 265 10 31 chr13 22941229 22941323 -97342989 - MTD LTR MaLR -327 92 1 4 760 847 122 95 0 chr13 22941969 22942116 -97342196 - B2_Mm2 SINE B2 -2 193 33 4 760 378 270 99 36 chr13 22945696 22945888 -97338424 + L1M2 LINE L1 4206 4409 -1734 4 760 256 337 45 0 chr13 22946351 22946440 -97337872 + B1F2 SINE Alu 3 95 -54 4 760 271 274 80 45 chr13 22946440 22946639 -97337673 + L1M2 LINE L1 4611 4816 -1327 4 760 642 147 57 29 chr13 22947024 22947164 -97337148 - Lx2A1 LINE L1 -5 7003 6860 4 760 262 272 72 52 chr13 22947452 22947549 -97336763 + B3 SINE B2 118 216 0 4 760 513 211 57 0 chr13 22947982 22948105 -97336207 + B1_Mus2 SINE Alu 18 147 0 4 760 206 32 32 0 chr13 22948483 22948514 -97335798 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 4 760 21 36 0 0 chr13 22950079 22950107 -97334205 + AT_rich Low_complexity Low_complexity 1 28 0 4 760 748 293 19 0 chr13 22951044 22951252 -97333060 + B3 SINE B2 1 212 -4 4 760 5480 142 10 3 chr13 22951276 22952165 -97332147 - Lx LINE L1 -9 6645 5751 4 760 333 289 91 78 chr13 22952465 22952619 -97331693 + RLTR41 LTR ERV1 212 367 -79 4 760 1771 214 58 131 chr13 22952827 22953436 -97330876 - RLTR26 LTR ERVK 0 642 79 4 760 387 199 73 27 chr13 22954326 22954476 -97329836 + L1_Mur3 LINE L1 859 1015 -6713 4 760 2176 188 73 77 chr13 22954475 22955134 -97329178 + L1_Mur3 LINE L1 2275 2930 -2950 4 760 7370 124 36 76 chr13 22955136 22956535 -97327777 - RLTR22_Mur LTR ERVK 0 1848 506 4 760 4980 16 0 0 chr13 22956536 22957288 -97327024 - L1Md_A LINE L1 -538 6044 5293 4 760 4397 35 0 0 chr13 22957288 22957805 -97326507 + L1Md_A LINE L1 6066 6582 0 4 760 7775 92 12 14 chr13 22958681 22959984 -97324328 - L1VL1 LINE L1 -3459 2424 1124 4 760 341 273 36 7 chr13 22960085 22960225 -97324087 + Lx6 LINE L1 6470 6613 -847 4 760 287 232 63 0 chr13 22961272 22961367 -97322945 - L1MA9 LINE L1 -114 6198 6098 4 760 1070 63 35 0 chr13 22961929 22962071 -97322241 + B1_Mus1 SINE Alu 2 148 0 4 760 259 65 0 42 chr13 22963188 22963236 -97321076 + (CAAAA)n Simple_repeat Simple_repeat 4 49 0 4 760 622 163 14 58 chr13 22963237 22963399 -97320913 - ORR1B1 LTR MaLR -239 155 1 4 760 7858 181 56 58 chr13 22963819 22966060 -97318252 - MurERV4_19-int LTR ERVK -1051 4729 2495 4 760 863 253 47 13 chr13 22966084 22966316 -97317996 + RMER12 LTR ERVK 1 240 -1082 4 760 1252 153 72 0 chr13 22966316 22966551 -97317761 - MurERV4_19-int LTR ERVK -4358 1422 1171 4 760 3118 61 2 2 chr13 22966574 22966970 -97317342 - L1_Mus1 LINE L1 0 6567 6172 4 760 227 232 41 31 chr13 22968961 22969059 -97315253 + A-rich Low_complexity Low_complexity 5 103 0 4 760 336 224 0 0 chr13 22969206 22969273 -97315039 - Lx8 LINE L1 -823 6650 6584 4 760 1009 48 0 40 chr13 22969277 22969428 -97314884 - L1Md_F2 LINE L1 0 6582 6438 4 760 299 196 0 0 chr13 22969430 22969486 -97314826 - RMER1A Other Other -454 576 521 4 760 369 259 0 11 chr13 22969479 22969569 -97314743 - RMER1A Other Other -848 182 94 4 760 1352 259 43 8 chr13 22969943 22970509 -97313803 - RMER1A Other Other -578 452 1 4 760 838 249 88 94 chr13 22970493 22970866 -97313446 - RMER1B Other Other -651 415 45 4 760 354 45 0 0 chr13 22971400 22971444 -97312868 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 760 2033 220 81 55 chr13 22971450 22972154 -97312158 - L1_Mur3 LINE L1 -965 4915 4194 4 760 345 254 17 0 chr13 22972137 22972255 -97312057 - L1MD LINE L1 -2406 3740 3621 5 760 837 178 121 10 chr13 22972255 22972290 -97312022 - ORR1C2 LTR MaLR -163 221 177 5 760 225 0 0 0 chr13 22972290 22972315 -97311997 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 760 825 90 0 0 chr13 22972315 22972447 -97311865 + (GA)n Simple_repeat Simple_repeat 2 134 0 5 760 837 178 121 10 chr13 22972447 22972609 -97311703 - ORR1C2 LTR MaLR -208 176 2 5 760 453 319 18 24 chr13 22973009 22973173 -97311139 - RSINE1 SINE B4 0 165 3 5 760 1642 168 57 84 chr13 22973854 22974258 -97310054 + RLTR9C LTR ERVK 1 393 0 5 760 406 211 18 0 chr13 22974312 22974421 -97309891 + (TA)n Simple_repeat Simple_repeat 1 111 0 5 760 733 250 10 39 chr13 22974661 22974869 -97309443 + B3 SINE B2 4 205 -11 5 760 242 56 0 27 chr13 22976047 22976084 -97308228 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 5 760 202 195 0 0 chr13 22976346 22976387 -97307925 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 760 24 0 0 0 chr13 22976594 22976618 -97307694 + AT_rich Low_complexity Low_complexity 1 24 0 5 760 266 304 87 19 chr13 22978509 22978613 -97305699 - PB1D7 SINE Alu 0 120 10 5 760 722 246 30 10 chr13 22980337 22980538 -97303774 - B3 SINE B2 -11 205 1 5 760 289 283 28 19 chr13 22980542 22980650 -97303662 - Lx9 LINE L1 -1229 6415 6307 5 760 445 326 5 50 chr13 22980659 22980859 -97303453 - B3A SINE B2 -4 194 4 5 760 269 309 36 9 chr13 22981266 22981377 -97302935 + L2a LINE L2 3307 3420 -6 5 760 1310 95 16 5 chr13 22981551 22981741 -97302571 - B2_Mm1t SINE B2 -1 192 1 5 760 923 227 18 0 chr13 22981768 22981997 -97302315 - Lx5 LINE L1 -1042 6008 5776 5 760 1507 291 35 2 chr13 22981998 22982449 -97301863 + Lx6 LINE L1 6966 7431 -29 5 760 469 276 78 56 chr13 22982473 22982653 -97301659 - B3 SINE B2 -31 185 2 5 760 185 296 19 0 chr13 22983146 22983200 -97301112 + MIR SINE MIR 34 88 -174 5 760 234 246 14 0 chr13 22983201 22983270 -97301042 + (TG)n Simple_repeat Simple_repeat 2 71 0 5 760 561 340 59 35 chr13 22983740 22984078 -97300234 - Lx8 LINE L1 -571 6902 6557 5 760 517 318 36 9 chr13 22984097 22984427 -97299885 + L1M2 LINE L1 4906 5244 -899 5 760 263 250 0 12 chr13 22985735 22985816 -97298496 + RMER16-int LTR ERVK 190 269 -7948 5 760 188 35 35 0 chr13 22985865 22985894 -97298418 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 5 760 1747 181 115 17 chr13 22986165 22986678 -97297634 + RMER16-int LTR ERVK 192 668 -5469 5 760 1163 141 15 5 chr13 22986681 22986881 -97297431 + RMER16-int LTR ERVK 1089 1290 -4116 5 760 1404 209 60 68 chr13 22986902 22987302 -97297010 + RMER16-int LTR ERVK 2354 2750 -4656 5 760 2359 179 32 52 chr13 22987299 22987906 -97296406 + RMER16-int LTR ERVK 2290 2839 -2567 5 760 1169 68 0 7 chr13 22987935 22988083 -97296229 + B1_Mm SINE Alu 1 147 0 5 760 232 65 21 42 chr13 22988086 22988134 -97296178 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 5 760 2059 248 52 21 chr13 22988139 22988841 -97295471 + RMER16-int LTR ERVK 4092 4534 -2872 5 760 1474 242 5 10 chr13 22988896 22989293 -97295019 + RMER16-int LTR ERVK 5122 5516 -1890 5 760 207 206 40 27 chr13 22989792 22989867 -97294445 + GA-rich Low_complexity Low_complexity 2 77 0 5 760 2703 154 74 30 chr13 22990861 22991391 -97292921 - RLTR31_Mur LTR ERVK 0 553 1 5 760 4853 72 5 28 chr13 22991633 22992304 -97292008 + L1Md_F2 LINE L1 5916 6570 -12 5 760 2384 123 139 19 chr13 22992362 22992792 -97291520 + RLTR45 LTR ERVK 1 482 0 5 760 220 140 0 23 chr13 22992819 22992863 -97291449 + (TATAA)n Simple_repeat Simple_repeat 4 46 0 5 760 32 0 0 0 chr13 22993961 22993993 -97290319 + AT_rich Low_complexity Low_complexity 1 32 0 5 760 330 305 122 39 chr13 22995494 22995699 -97288613 + RMER15 LTR ERVL 340 561 -14 5 760 3483 165 20 45 chr13 22996310 22997046 -97287266 + L1VL1 LINE L1 424 1119 -5863 5 760 16349 46 2 14 chr13 22997047 23000000 -97284312 + L1Md_A LINE L1 439 3350 -2533 5 760 5845 26 3 0 chr13 23000000 23000732 -97283580 + L1_Mm LINE L1 3351 4084 -1799 1 760 2799 49 0 0 chr13 23000752 23001098 -97283214 - L1Md_A LINE L1 -2 6580 6235 2 760 601 268 38 37 chr13 23001102 23001500 -97282812 - IAP-d-int LTR ERVK -2719 4102 3511 3 760 751 271 61 48 chr13 23001501 23001943 -97282369 - IAP-d-int LTR ERVK -3870 2672 2225 3 760 358 202 55 55 chr13 23002124 23002234 -97282078 - RLTR10-int LTR ERVK -1559 428 319 4 760 550 237 183 50 chr13 23002251 23002491 -97281821 - RLTR10A LTR ERVK 0 411 140 4 760 334 121 23 0 chr13 23002543 23002629 -97281683 - MYSERV6-int LTR ERVK -1057 7902 7811 5 760 516 240 11 106 chr13 23002851 23003063 -97281249 - RMER4A LTR ERVK -28 557 255 6 760 380 206 0 0 chr13 23003112 23003175 -97281137 + RMER13B LTR ERVK 1 63 -845 7 760 1646 222 60 62 chr13 23003175 23003727 -97280585 + RMER17A-int LTR ERVK 1146 1696 -32 8 760 2674 143 14 2 chr13 23003763 23004176 -97280136 + RMER13B LTR ERVK 1 418 -490 8 760 685 239 42 53 chr13 23004174 23004422 -97279890 + RMER13B LTR ERVK 566 907 -1 8 760 2636 254 75 79 chr13 23004434 23005731 -97278581 - MYSERV-int LTR ERVK -462 5318 3777 9 760 665 263 60 83 chr13 23006640 23006988 -97277324 - RLTR15 LTR ERVK -19 340 1 1 760 270 203 34 0 chr13 23007791 23007850 -97276462 + SRV_MM-int LTR ERVK 514 574 -5593 1 760 273 98 0 0 chr13 23008177 23008218 -97276094 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 760 882 0 0 0 chr13 23009405 23009503 -97274809 + (TTC)n Simple_repeat Simple_repeat 2 99 0 1 760 1258 229 44 135 chr13 23009808 23010334 -97273978 - RLTR12B LTR ERVK -9 519 42 1 760 1591 148 12 78 chr13 23010956 23011301 -97273011 + RLTRETN_Mm LTR ERVK 1 322 0 1 760 10187 67 11 50 chr13 23011302 23012867 -97271445 + MMETn-int LTR ERVK 2 1505 -3339 1 760 9483 122 15 31 chr13 23012931 23014643 -97269669 + MMETn-int LTR ERVK 3219 5714 -2503 1 760 1577 142 14 81 chr13 23014643 23014988 -97269324 + RLTRETN_Mm LTR ERVK 1 322 0 1 760 222 235 20 39 chr13 23015968 23016070 -97268242 + GA-rich Low_complexity Low_complexity 4 103 0 1 760 22 56 0 0 chr13 23016902 23016938 -97267374 + AT_rich Low_complexity Low_complexity 1 36 0 1 760 258 249 197 90 chr13 23017061 23017295 -97267017 - MT2A LTR ERVL -105 428 170 1 760 4538 95 19 13 chr13 23017307 23017977 -97266335 - Lx3_Mus LINE L1 -1 7008 6335 1 760 393 216 16 52 chr13 23018199 23018341 -97265971 + RMER3D-int LTR ERVK 652 760 -2082 2 760 575 157 43 0 chr13 23018469 23018584 -97265728 + RMER3D-int LTR ERVK 491 610 -2232 2 760 500 136 11 43 chr13 23018605 23018697 -97265615 + RMER3D-int LTR ERVK 1014 1102 -1740 2 760 974 161 161 45 chr13 23018724 23019198 -97265114 + RMER3D-int LTR ERVK 1643 2148 -694 2 760 4240 131 6 39 chr13 23019200 23020575 -97263737 - L1Md_A LINE L1 -4136 1747 446 2 760 1559 178 77 0 chr13 23020587 23020992 -97263320 + MYSERV16_I-int LTR ERVK 1890 2325 -1 2 760 2020 133 73 112 chr13 23020993 23021231 -97263081 + BGLII_Mus LTR ERVK 1 190 -232 2 760 787 0 104 0 chr13 23021231 23021394 -97262918 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 760 2020 133 73 112 chr13 23021394 23021594 -97262718 + BGLII_Mus LTR ERVK 191 421 -1 2 760 1425 133 4 20 chr13 23021594 23021847 -97262465 - Lx3_Mus LINE L1 -635 6374 6126 2 760 272 296 147 9 chr13 23021898 23022014 -97262298 - MTE2a LTR MaLR -242 137 6 2 760 34 0 0 0 chr13 23022889 23022923 -97261389 + AT_rich Low_complexity Low_complexity 1 34 0 2 760 332 295 85 62 chr13 23022957 23023087 -97261225 + B1F SINE Alu 10 142 -7 2 760 342 0 0 0 chr13 23024881 23024919 -97259393 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 760 7959 38 1 0 chr13 23025864 23026859 -97257453 - L1Md_T LINE L1 0 6582 5587 3 760 263 250 0 12 chr13 23027212 23027293 -97257019 + RMER16-int LTR ERVK 190 269 -7948 3 760 188 35 35 0 chr13 23027342 23027371 -97256941 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 3 760 1725 183 115 17 chr13 23027640 23028153 -97256159 + RMER16-int LTR ERVK 192 668 -5469 3 760 1163 141 15 5 chr13 23028156 23028356 -97255956 + RMER16-int LTR ERVK 1089 1290 -4116 3 760 1404 209 60 68 chr13 23028377 23028777 -97255535 + RMER16-int LTR ERVK 2354 2750 -4656 3 760 2359 179 32 52 chr13 23028774 23029381 -97254931 + RMER16-int LTR ERVK 2290 2839 -2567 3 760 1169 68 0 7 chr13 23029410 23029558 -97254754 + B1_Mm SINE Alu 1 147 0 3 760 232 65 21 42 chr13 23029561 23029609 -97254703 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 760 2059 248 52 21 chr13 23029614 23030316 -97253996 + RMER16-int LTR ERVK 4092 4534 -2872 3 760 1474 242 5 10 chr13 23030371 23030768 -97253544 + RMER16-int LTR ERVK 5122 5516 -1890 3 760 233 208 27 27 chr13 23031267 23031341 -97252971 + GA-rich Low_complexity Low_complexity 2 75 0 3 760 2703 154 74 30 chr13 23032335 23032865 -97251447 - RLTR31_Mur LTR ERVK 0 553 1 3 760 4853 72 5 28 chr13 23033107 23033778 -97250534 + L1Md_F2 LINE L1 5916 6570 -12 3 760 2384 123 139 19 chr13 23033836 23034266 -97250046 + RLTR45 LTR ERVK 1 482 0 3 760 220 140 0 23 chr13 23034293 23034337 -97249975 + (TATAA)n Simple_repeat Simple_repeat 4 46 0 4 760 32 0 0 0 chr13 23035435 23035467 -97248845 + AT_rich Low_complexity Low_complexity 1 32 0 4 760 330 305 122 39 chr13 23036968 23037173 -97247139 + RMER15 LTR ERVL 340 561 -14 4 760 3483 165 20 45 chr13 23037784 23038520 -97245792 + L1VL1 LINE L1 424 1119 -5863 4 760 22230 42 2 11 chr13 23038521 23042206 -97242106 + L1Md_T LINE L1 439 4084 -1799 4 760 36771 35 4 7 chr13 23042226 23048422 -97235890 - L1Md_T LINE L1 -2 6580 411 4 760 12352 26 0 0 chr13 23048416 23049933 -97234379 + L1Md_T LINE L1 4070 5586 -297 4 760 8347 38 1 0 chr13 23049933 23050928 -97233384 + L1Md_T LINE L1 5587 6582 0 4 760 486 0 0 0 chr13 23051873 23051927 -97232385 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 760 332 295 85 62 chr13 23053721 23053851 -97230461 - B1F SINE Alu -7 142 10 4 760 34 0 0 0 chr13 23053885 23053919 -97230393 + AT_rich Low_complexity Low_complexity 1 34 0 4 760 272 296 147 9 chr13 23054794 23054910 -97229402 + MTE2a LTR MaLR 6 137 -242 4 760 1419 133 4 24 chr13 23054961 23055215 -97229097 + Lx3_Mus LINE L1 6126 6374 -635 5 760 2020 133 73 112 chr13 23055215 23055415 -97228897 - BGLII_Mus LTR ERVK 0 422 192 5 760 787 0 104 0 chr13 23055415 23055578 -97228734 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 760 2020 133 73 112 chr13 23055578 23055816 -97228496 - BGLII_Mus LTR ERVK -231 191 2 5 760 1559 178 77 0 chr13 23055817 23056222 -97228090 - MYSERV16_I-int LTR ERVK -1 2325 1890 5 760 4240 131 6 39 chr13 23056234 23057609 -97226703 + L1Md_A LINE L1 446 1747 -4136 5 760 974 164 8 68 chr13 23057611 23057847 -97226465 - RMER3D-int LTR ERVK -694 2148 1927 5 760 898 158 58 20 chr13 23057854 23058085 -97226227 - RMER3D-int LTR ERVK -984 1858 1643 5 760 500 136 11 43 chr13 23058112 23058204 -97226108 - RMER3D-int LTR ERVK -1740 1102 1014 5 760 575 157 43 0 chr13 23058225 23058340 -97225972 - RMER3D-int LTR ERVK -2232 610 491 5 760 393 216 16 52 chr13 23058468 23058610 -97225702 - RMER3D-int LTR ERVK -2082 760 652 5 760 4538 95 19 13 chr13 23058832 23059502 -97224810 + Lx3_Mus LINE L1 6335 7008 -1 5 760 258 249 197 90 chr13 23059514 23059748 -97224564 + MT2A LTR ERVL 170 428 -105 5 760 22 56 0 0 chr13 23059871 23059907 -97224405 + AT_rich Low_complexity Low_complexity 1 36 0 5 760 222 235 20 39 chr13 23060739 23060841 -97223471 + CT-rich Low_complexity Low_complexity 4 103 0 5 760 1577 142 14 81 chr13 23061821 23062166 -97222146 - RLTRETN_Mm LTR ERVK 0 322 1 5 760 9483 122 15 31 chr13 23062166 23063878 -97220434 - MMETn-int LTR ERVK -2503 5714 3219 5 760 10187 67 11 50 chr13 23063942 23065507 -97218805 - MMETn-int LTR ERVK -3339 1505 2 5 760 1591 148 12 78 chr13 23065508 23065853 -97218459 - RLTRETN_Mm LTR ERVK 0 322 1 5 760 1258 229 44 135 chr13 23066475 23067001 -97217311 + RLTR12B LTR ERVK 42 519 -9 6 760 882 0 0 0 chr13 23067306 23067404 -97216908 + (GAA)n Simple_repeat Simple_repeat 2 99 0 6 760 273 98 0 0 chr13 23068591 23068632 -97215680 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 761 270 203 34 0 chr13 23068959 23069018 -97215294 - SRV_MM-int LTR ERVK -5593 574 514 6 761 665 263 60 83 chr13 23069821 23070169 -97214143 + RLTR15 LTR ERVK 1 340 -19 6 761 2636 254 75 79 chr13 23071078 23072375 -97211937 + MYSERV-int LTR ERVK 3777 5318 -462 6 761 685 239 42 53 chr13 23072387 23072635 -97211677 - RMER13B LTR ERVK -1 907 566 6 761 2674 143 14 2 chr13 23072633 23073046 -97211266 - RMER13B LTR ERVK -490 418 1 6 761 1646 222 60 62 chr13 23073082 23073634 -97210678 - RMER17A-int LTR ERVK -32 1696 1146 6 761 380 206 0 0 chr13 23073634 23073697 -97210615 - RMER13B LTR ERVK -845 63 1 6 761 516 240 11 106 chr13 23073746 23073958 -97210354 + RMER4A LTR ERVK 255 557 -28 6 761 334 121 23 0 chr13 23074180 23074266 -97210046 + MYSERV6-int LTR ERVK 7811 7902 -1057 6 761 550 237 183 50 chr13 23074318 23074558 -97209754 + RLTR10A LTR ERVK 140 411 0 7 761 358 202 55 55 chr13 23074575 23074685 -97209627 + RLTR45-int LTR ERVK 319 428 -1559 7 761 751 271 61 48 chr13 23074866 23075308 -97209004 + IAP-d-int LTR ERVK 2225 2672 -3870 7 761 601 286 27 26 chr13 23075309 23075796 -97208516 + IAP-d-int LTR ERVK 3208 4102 -2719 7 761 1415 308 57 39 chr13 23076155 23077152 -97207160 + IAP-d-int LTR ERVK 4193 5207 -1335 7 761 1611 199 40 31 chr13 23077286 23077759 -97206553 + RLTR45-int LTR ERVK 6522 7042 -202 7 761 522 235 127 109 chr13 23077796 23078063 -97206249 + RLTR10A LTR ERVK 140 411 0 7 761 973 142 59 21 chr13 23078063 23078300 -97206012 + MYSERV6-int LTR ERVK 7866 8111 -848 7 761 194 0 39 0 chr13 23078604 23078630 -97205682 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 761 297 51 0 0 chr13 23078780 23078819 -97205493 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 761 221 383 12 0 chr13 23078853 23079015 -97205297 + (TG)n Simple_repeat Simple_repeat 1 164 0 7 761 1107 152 0 5 chr13 23079135 23079320 -97204992 - Lx LINE L1 -14 6640 6457 7 761 58 0 0 14 chr13 23079579 23079616 -97204696 + AT_rich Low_complexity Low_complexity 1 37 0 7 761 1055 82 0 52 chr13 23079616 23079771 -97204541 + B1_Mus1 SINE Alu 1 147 -1 7 761 58 0 0 14 chr13 23079771 23079802 -97204510 + AT_rich Low_complexity Low_complexity 1 31 0 7 761 891 200 85 134 chr13 23079804 23080191 -97204121 + RLTR9A LTR ERVK 1 368 0 7 761 430 68 13 26 chr13 23080508 23080584 -97203728 + (TAAAA)n Simple_repeat Simple_repeat 1 75 0 8 761 1390 155 216 9 chr13 23080671 23081004 -97203308 + RMER16-int LTR ERVK 255 656 -4750 8 761 4379 130 99 20 chr13 23081110 23081971 -97202341 + RMER16-int LTR ERVK 1677 2605 -2801 8 761 4108 149 26 7 chr13 23081973 23082702 -97201610 + RMER17B LTR ERVK 1 958 0 8 761 6538 151 48 34 chr13 23082702 23084158 -97200154 + RMER16-int LTR ERVK 2602 3822 -1584 8 761 350 277 176 61 chr13 23084684 23085014 -97199298 + RLTR9A LTR ERVK 1 368 0 8 761 8347 129 19 8 chr13 23085030 23086394 -97197918 + Lx3B LINE L1 5589 6967 -6 8 761 1247 74 11 0 chr13 23086407 23086582 -97197730 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 8 761 300 53 0 0 chr13 23086582 23086620 -97197692 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 8 761 491 168 168 0 chr13 23086620 23086757 -97197555 + L1_Mur3 LINE L1 5353 5512 -368 8 761 1568 176 16 74 chr13 23086766 23087109 -97197203 - RMER16-int LTR ERVK -5048 358 35 8 761 2570 95 139 19 chr13 23087109 23087539 -97196773 + RLTR45 LTR ERVK 1 482 0 9 761 1568 176 16 74 chr13 23087539 23087575 -97196737 - RMER16-int LTR ERVK -5372 34 1 8 761 1233 189 47 124 chr13 23087575 23088011 -97196301 - RMER16 LTR ERVK 0 533 1 8 761 186 71 0 0 chr13 23088349 23088377 -97195935 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 9 761 2430 140 30 92 chr13 23088666 23089169 -97195143 - RLTR45 LTR ERVK 0 482 11 9 761 2890 190 24 9 chr13 23089307 23089854 -97194458 - RLTR20B2 LTR ERVK -2 558 4 9 761 4466 158 51 4 chr13 23089855 23090820 -97193492 - MYSERV16_I-int LTR ERVK -1 2325 1316 9 761 5755 138 6 10 chr13 23090828 23091813 -97192499 - L1_Mm LINE L1 -215 5668 4688 9 761 3653 110 13 2 chr13 23091813 23092349 -97191963 + L1_Mus4 LINE L1 6095 6636 0 9 761 1439 90 35 15 chr13 23092375 23092634 -97191678 - MYSERV16_I-int LTR ERVK -996 1330 1067 9 761 41 72 0 0 chr13 23092675 23092758 -97191554 + AT_rich Low_complexity Low_complexity 1 83 0 9 761 545 257 47 13 chr13 23092769 23092919 -97191393 - MYSERV16_I-int LTR ERVK -1268 1058 904 9 761 180 0 0 0 chr13 23092931 23092951 -97191361 + (T)n Simple_repeat Simple_repeat 1 20 0 9 761 1029 103 0 0 chr13 23092962 23093098 -97191214 - B1_Mus1 SINE Alu -12 136 1 9 761 1670 184 80 53 chr13 23093098 23093535 -97190777 - MYSERV16_I-int LTR ERVK -1406 920 472 9 761 383 0 21 0 chr13 23094079 23094126 -97190186 + (TG)n Simple_repeat Simple_repeat 1 48 0 9 761 259 218 24 49 chr13 23094207 23094289 -97190023 - RMER3D-int LTR ERVK -1735 1107 1028 1 761 511 111 185 0 chr13 23094293 23094401 -97189911 + Lx4A LINE L1 4145 4272 -1605 1 761 1482 138 25 11 chr13 23094390 23094676 -97189636 + L1_Mur2 LINE L1 3291 3580 -2297 1 761 648 200 8 30 chr13 23094670 23094871 -97189441 + Lx4A LINE L1 4264 4424 -1453 1 761 1084 122 20 15 chr13 23094869 23095068 -97189244 + Lx4A LINE L1 5702 5901 -1157 1 761 4654 162 43 26 chr13 23095084 23095493 -97188819 - Lx4A LINE L1 -208 6850 6429 1 761 3944 129 82 93 chr13 23095493 23096238 -97188074 + RMER19A LTR ERVK 1 737 0 1 761 4654 162 43 26 chr13 23096238 23096764 -97187548 - Lx4A LINE L1 -630 6428 5899 1 761 756 214 42 16 chr13 23096770 23096960 -97187352 + Lx4B LINE L1 6859 7053 -5 1 761 513 199 94 8 chr13 23096979 23097066 -97187246 + L1_Mur3 LINE L1 2649 2735 -3145 1 761 548 41 0 26 chr13 23097066 23097142 -97187170 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 1 761 760 194 545 6 chr13 23097142 23097340 -97186972 + L1_Mur3 LINE L1 2736 3047 -2833 1 761 2182 249 111 20 chr13 23097342 23097937 -97186375 + RMER1B Other Other 155 803 -263 1 761 579 245 79 6 chr13 23097977 23098141 -97186171 + Lx6 LINE L1 5845 6020 -1440 1 761 508 237 52 120 chr13 23098145 23098337 -97185975 + B2_Mm2 SINE B2 5 183 -12 1 761 3530 274 53 8 chr13 23098337 23099398 -97184914 + Lx6 LINE L1 6009 7116 -344 1 761 296 310 38 57 chr13 23100090 23100196 -97184116 + PB1D10 SINE Alu 14 117 0 1 761 330 121 0 0 chr13 23102010 23102076 -97182236 + (CAGA)n Simple_repeat Simple_repeat 1 66 0 1 761 6849 108 14 14 chr13 23102237 23103260 -97181052 + RLTR13D5 LTR ERVK 1 1023 0 1 761 425 303 47 61 chr13 23104505 23104719 -97179593 - B3 SINE B2 -2 214 4 1 761 4519 117 6 12 chr13 23105148 23105834 -97178478 - L1Md_F2 LINE L1 0 6582 5901 1 761 288 0 0 0 chr13 23106239 23106271 -97178041 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1 761 366 330 89 22 chr13 23106354 23106534 -97177778 - B3 SINE B2 -2 214 23 1 761 225 0 0 0 chr13 23106653 23106678 -97177634 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 761 219 36 0 0 chr13 23107000 23107028 -97177284 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 761 297 155 0 0 chr13 23107486 23107544 -97176768 + (TTG)n Simple_repeat Simple_repeat 2 59 0 1 761 395 362 35 14 chr13 23107933 23108076 -97176236 + RSINE1 SINE B4 3 148 -17 1 761 3389 174 17 179 chr13 23108235 23108555 -97175757 - RLTR21 LTR ERVK 0 1572 1305 1 761 447 19 0 0 chr13 23108555 23108607 -97175705 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 761 3389 174 17 179 chr13 23108607 23108868 -97175444 - RLTR21 LTR ERVK -268 1304 1103 1 761 387 0 0 0 chr13 23108868 23108911 -97175401 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 761 3389 174 17 179 chr13 23108911 23109335 -97174977 - RLTR21 LTR ERVK -470 1102 729 1 761 305 274 87 32 chr13 23109339 23109407 -97174905 - RMER17C LTR ERVK -136 274 201 1 761 252 0 0 0 chr13 23109407 23109435 -97174877 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 761 305 274 87 32 chr13 23109435 23109551 -97174761 - RMER17C LTR ERVK -210 200 81 1 761 4178 143 49 13 chr13 23109570 23110283 -97174029 - RLTR21 LTR ERVK -833 739 1 1 761 629 327 43 35 chr13 23111112 23111366 -97172946 + MTD LTR MaLR 1 256 -163 1 761 1576 216 168 38 chr13 23111601 23112102 -97172210 - RMER2 LTR ERV1 0 567 2 1 761 575 290 109 26 chr13 23112105 23112600 -97171712 + L1_Mur3 LINE L1 1358 1893 -3987 1 761 6838 84 28 15 chr13 23112625 23114366 -97169946 - L1_Mus2 LINE L1 0 6566 4800 1 761 1584 206 16 10 chr13 23114786 23115105 -97169207 + ORR1B1 LTR MaLR 60 386 -8 1 761 2446 112 14 47 chr13 23116575 23116998 -97167314 - RLTR9E LTR ERVK 0 409 1 1 761 7899 210 67 40 chr13 23117045 23118179 -97166133 + L1_Mur3 LINE L1 602 1773 -4107 1 761 4419 68 9 2 chr13 23118179 23118739 -97165573 + LTRIS2 LTR ERV1 1 564 0 1 761 7899 186 24 15 chr13 23118739 23119998 -97164314 + L1_Mur3 LINE L1 1774 3045 -2835 1 761 1028 141 6 0 chr13 23119999 23120176 -97164136 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 1 761 414 0 0 0 chr13 23120176 23120222 -97164090 + (GGAA)n Simple_repeat Simple_repeat 1 46 0 1 761 1494 228 71 61 chr13 23120246 23120740 -97163572 + RMER1B Other Other 51 867 -199 1 761 3924 257 58 35 chr13 23120735 23120897 -97163415 + Lx6 LINE L1 5845 6024 -1436 1 761 707 146 118 30 chr13 23120897 23121066 -97163246 + B2_Mm2 SINE B2 2 185 -10 1 761 3924 257 58 35 chr13 23121066 23122147 -97162165 + Lx6 LINE L1 6025 7116 -344 1 761 414 0 0 0 chr13 23122782 23122828 -97161484 + (TTTTA)n Simple_repeat Simple_repeat 5 50 0 1 761 2293 54 3 29 chr13 23122880 23123187 -97161125 - L1_Mus1 LINE L1 -1 6566 6268 1 761 268 380 35 0 chr13 23123255 23123368 -97160944 + PB1D10 SINE Alu 1 117 0 1 761 221 0 0 33 chr13 23123448 23123478 -97160834 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 761 26 0 0 0 chr13 23124808 23124834 -97159478 + AT_rich Low_complexity Low_complexity 1 26 0 1 761 1065 76 0 0 chr13 23125491 23125635 -97158677 + (GAAA)n Simple_repeat Simple_repeat 3 146 0 1 761 33 43 0 0 chr13 23126068 23126115 -97158197 + AT_rich Low_complexity Low_complexity 1 47 0 1 761 577 288 25 25 chr13 23127484 23127680 -97156632 - B3 SINE B2 -17 199 4 1 761 545 317 45 45 chr13 23128615 23128813 -97155499 - B3A SINE B2 0 198 1 1 761 3403 92 23 8 chr13 23128885 23129365 -97154947 - L1Md_F2 LINE L1 -5 6577 6091 1 761 2443 39 0 0 chr13 23129365 23129671 -97154641 + L1Md_F2 LINE L1 5782 6087 -495 1 761 455 285 129 14 chr13 23129882 23130021 -97154291 + RSINE1 SINE B4 11 165 0 1 761 31 26 0 0 chr13 23130022 23130060 -97154252 + AT_rich Low_complexity Low_complexity 1 38 0 1 761 189 0 0 0 chr13 23130333 23130354 -97153958 + (A)n Simple_repeat Simple_repeat 1 21 0 1 761 1161 51 0 0 chr13 23130356 23130494 -97153818 + B1_Mus2 SINE Alu 1 138 -9 1 761 247 296 122 46 chr13 23130904 23131035 -97153277 - RMER15 LTR ERVL -99 476 336 1 761 240 186 87 52 chr13 23134933 23135007 -97149305 + MIRb SINE MIR 18 102 -166 1 761 10371 164 81 75 chr13 23135559 23138394 -97145918 + L1Md_F LINE L1 240 3223 -2660 1 761 876 164 189 5 chr13 23138394 23138584 -97145728 - URR1B DNA MER1_type 0 225 1 1 761 10371 164 81 75 chr13 23138584 23139730 -97144582 + L1Md_F LINE L1 3224 4431 -1452 1 761 9203 96 6 20 chr13 23139729 23141551 -97142761 + Lx3A LINE L1 5193 6978 -3 1 761 1697 255 24 8 chr13 23141572 23142074 -97142238 + Lx7 LINE L1 5351 5860 -20 1 761 1937 75 0 4 chr13 23142074 23142343 -97141969 + L1_Mm LINE L1 4817 5084 -799 1 761 3467 247 51 20 chr13 23142331 23143109 -97141203 + Lx7 LINE L1 6275 7084 -612 1 761 1996 147 36 50 chr13 23143109 23143525 -97140787 + RMER17C LTR ERVK 1 410 0 1 761 3467 247 51 20 chr13 23143525 23143750 -97140562 + Lx7 LINE L1 7085 7309 -387 1 761 255 23 44 22 chr13 23143762 23143807 -97140505 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 1 761 789 301 28 9 chr13 23145349 23145560 -97138752 + B3 SINE B2 2 216 0 1 761 276 158 25 50 chr13 23149604 23149726 -97134586 + T-rich Low_complexity Low_complexity 1 118 0 1 761 190 227 0 22 chr13 23149956 23150001 -97134311 - MIRb SINE MIR -10 258 215 1 761 523 269 109 0 chr13 23151436 23151590 -97132722 + B3 SINE B2 4 168 -48 1 761 378 0 0 0 chr13 23151590 23151632 -97132680 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 761 523 269 109 0 chr13 23151632 23151652 -97132660 + B3 SINE B2 169 196 -20 1 761 197 197 14 0 chr13 23151811 23151882 -97132430 + (TTTG)n Simple_repeat Simple_repeat 1 72 0 1 761 195 114 0 0 chr13 23151896 23151931 -97132381 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 761 845 304 39 4 chr13 23151931 23152189 -97132123 - Lx9 LINE L1 -1011 6633 6367 1 761 1727 220 49 0 chr13 23152269 23152351 -97131961 + ORR1B2 LTR MaLR 1 82 -285 1 761 4448 170 125 10 chr13 23152351 23153165 -97131147 + RMER13B LTR ERVK 1 908 0 1 761 1727 220 49 0 chr13 23153165 23153432 -97130880 + ORR1B2 LTR MaLR 83 366 -1 1 761 226 264 7 104 chr13 23153563 23153698 -97130614 - Lx9 LINE L1 -1634 6010 5889 1 761 339 360 23 25 chr13 23153713 23154144 -97130168 + L1M2 LINE L1 4652 5081 -1062 1 761 30 27 0 0 chr13 23154321 23154358 -97129954 + AT_rich Low_complexity Low_complexity 1 37 0 1 761 1692 211 35 36 chr13 23155108 23155702 -97128610 - RLTR31_Mur LTR ERVK 0 561 1 1 761 521 155 25 17 chr13 23155712 23155830 -97128482 + RMER3D-int LTR ERVK 2724 2842 0 1 761 3805 172 26 26 chr13 23155830 23155848 -97128464 + RLTR17 LTR ERVK 1 18 -674 1 761 1213 221 42 42 chr13 23155848 23156207 -97128105 + RLTR10D LTR ERVK 1 359 0 1 761 3805 172 26 26 chr13 23156207 23156880 -97127432 + RLTR17 LTR ERVK 19 692 0 1 761 1938 189 18 25 chr13 23157257 23157649 -97126663 + ORR1B1 LTR MaLR 4 392 -2 1 761 440 257 0 9 chr13 23157668 23157782 -97126530 - Lx6 LINE L1 -92 7368 7256 1 761 1047 288 7 12 chr13 23157787 23158221 -97126091 + Lx5 LINE L1 6057 6728 -732 1 761 324 0 0 0 chr13 23158359 23158395 -97125917 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 761 497 240 74 97 chr13 23159257 23159309 -97125003 - B3 SINE B2 0 216 154 1 761 261 0 0 0 chr13 23159309 23159338 -97124974 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 761 478 0 32 0 chr13 23159338 23159399 -97124913 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 761 497 240 74 97 chr13 23159399 23159562 -97124750 - B3 SINE B2 -63 153 6 1 761 210 281 31 15 chr13 23160471 23160536 -97123776 - MIRb SINE MIR -39 229 164 1 761 375 143 55 41 chr13 23160850 23160923 -97123389 - HAL1-3A_ME LINE L1 -808 2050 1977 1 761 197 132 26 0 chr13 23161748 23161786 -97122526 + GA-rich Low_complexity Low_complexity 2 40 0 1 761 6744 70 35 3 chr13 23161928 23163152 -97121160 - L1Md_F2 LINE L1 -2 6580 5317 1 761 19257 82 6 65 chr13 23163152 23166869 -97117443 - L1Md_F2 LINE L1 -1767 4116 622 1 761 31 0 0 0 chr13 23168800 23168831 -97115481 + AT_rich Low_complexity Low_complexity 1 31 0 1 761 1551 198 56 38 chr13 23169459 23169852 -97114460 - RLTR13A LTR ERVK 0 855 456 1 761 10173 58 1 0 chr13 23169852 23171189 -97113123 + L1Md_F2 LINE L1 4249 5586 -297 1 761 8063 50 1 2 chr13 23171189 23172186 -97112126 + L1Md_F2 LINE L1 5587 6582 0 1 761 2129 208 48 6 chr13 23172186 23172666 -97111646 - RLTR13A LTR ERVK -355 500 1 1 761 278 149 0 0 chr13 23173760 23173807 -97110505 - B4 SINE B4 -243 49 3 1 761 273 327 9 0 chr13 23174517 23174624 -97109688 + L1_Rod LINE L1 4847 4954 -893 1 761 810 38 46 0 chr13 23174805 23174936 -97109376 + (TC)n Simple_repeat Simple_repeat 2 138 0 1 761 225 65 0 0 chr13 23174936 23174966 -97109346 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 761 238 340 18 79 chr13 23174970 23175248 -97109064 - L1M2 LINE L1 -747 5133 4873 1 761 716 326 11 61 chr13 23175259 23175621 -97108691 + Lx8 LINE L1 6551 6894 -579 1 761 636 263 32 6 chr13 23175878 23176035 -97108277 + RSINE1 SINE B4 3 163 -2 1 761 265 218 0 0 chr13 23176316 23176371 -97107941 + B3A SINE B2 2 56 -142 1 761 213 281 132 12 chr13 23177536 23177619 -97106693 + PB1D10 SINE Alu 22 114 -3 2 761 2584 97 0 53 chr13 23179292 23179671 -97104641 - RLTR10D LTR ERVK 0 359 1 2 761 3017 49 8 33 chr13 23179915 23180313 -97103999 - RLTR10 LTR ERVK -2 388 1 2 761 1144 82 0 0 chr13 23180469 23180616 -97103696 + B1_Mm SINE Alu 1 147 0 2 761 530 246 7 53 chr13 23180662 23180812 -97103500 - B3 SINE B2 -73 143 1 2 761 2422 231 24 22 chr13 23180854 23181601 -97102711 + L1VL4 LINE L1 511 1176 -5384 2 761 7153 116 5 14 chr13 23181601 23182858 -97101454 + L1_Mus3 LINE L1 4689 5927 -711 2 761 2808 111 14 0 chr13 23182858 23183273 -97101039 + L1_Mus3 LINE L1 6218 6638 0 2 761 633 294 5 34 chr13 23183311 23183519 -97100793 - B3 SINE B2 -11 205 4 2 761 363 248 0 0 chr13 23183784 23183889 -97100423 + (CATATA)n Simple_repeat Simple_repeat 3 107 0 2 761 3758 92 23 7 chr13 23185140 23185182 -97099130 + RMER16-int LTR ERVK 3767 3808 -1598 2 761 225 0 0 0 chr13 23185182 23185207 -97099105 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 761 3758 92 23 7 chr13 23185207 23185724 -97098588 + RMER16-int LTR ERVK 3809 4335 -1071 2 761 225 331 29 114 chr13 23186516 23186656 -97097656 + RLTR8 LTR ERVK 229 356 -9 2 761 467 331 23 29 chr13 23186656 23186998 -97097314 + RMER16-int LTR ERVK 5177 5516 -292 2 761 265 235 161 0 chr13 23187272 23187353 -97096959 + RLTR13C1 LTR ERVK 1 94 -1020 2 761 278 244 69 85 chr13 23188017 23188147 -97096165 + RLTR13C1 LTR ERVK 816 943 -40 2 761 940 254 35 0 chr13 23189828 23190029 -97094283 + B3 SINE B2 2 209 -7 2 761 200 243 108 54 chr13 23192285 23192359 -97091953 - MIRm SINE MIR 0 276 199 2 761 342 18 18 35 chr13 23193581 23193638 -97090674 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 2 761 656 272 18 45 chr13 23193725 23193948 -97090364 + RLTR42-int LTR ERVK 1171 1387 -4135 2 761 318 167 0 0 chr13 23194152 23194206 -97090106 + RLTR42-int LTR ERVK 1045 1098 -4424 2 761 194 0 0 37 chr13 23194408 23194435 -97089877 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 761 510 220 89 138 chr13 23194800 23195148 -97089164 + RLTR19-int LTR ERVK 2728 3058 -3079 2 761 392 197 28 12 chr13 23196095 23196183 -97088129 + ORR1D1 LTR MaLR 40 160 -214 2 761 570 67 0 0 chr13 23197139 23197214 -97087098 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 761 240 111 0 0 chr13 23197335 23197371 -97086941 + (CAT)n Simple_repeat Simple_repeat 1 36 0 2 761 454 259 68 17 chr13 23197372 23197490 -97086822 - B1_Mus2 SINE Alu -12 135 12 2 95 16279 112 17 3 chr13 23197675 23200970 -97083342 - L1VL4 LINE L1 0 3559 216 2 762 653 154 17 17 chr13 23200970 23201089 -97083223 - MT2C_Mm LTR ERVL -67 408 290 2 762 275 197 59 47 chr13 23201100 23201236 -97083076 - RMER1C Other Other -4 1338 1217 2 762 716 222 11 10 chr13 23201367 23201571 -97082741 - RMER1B Other Other -189 877 719 2 762 563 302 21 38 chr13 23201573 23201926 -97082386 - RMER1B Other Other -830 236 73 2 762 289 219 27 0 chr13 23202687 23202760 -97081552 + MTD LTR MaLR 34 108 -311 2 762 287 234 7 114 chr13 23202768 23202908 -97081404 + Lx6 LINE L1 7336 7460 0 2 762 2051 273 117 21 chr13 23202918 23204198 -97080114 - L1_Mur3 LINE L1 -2913 2967 1559 2 762 370 189 53 13 chr13 23204252 23204327 -97079985 - PB1D9 SINE Alu -15 105 28 2 762 331 335 32 46 chr13 23205256 23205475 -97078837 + B3 SINE B2 1 216 0 2 762 24 32 0 0 chr13 23206841 23206872 -97077440 + AT_rich Low_complexity Low_complexity 1 31 0 2 762 321 125 0 0 chr13 23206901 23206957 -97077355 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 762 575 250 59 32 chr13 23207269 23207455 -97076857 - B2_Mm2 SINE B2 -4 191 1 2 762 28 71 0 0 chr13 23207512 23207568 -97076744 + AT_rich Low_complexity Low_complexity 1 56 0 2 762 245 217 0 118 chr13 23209489 23209557 -97074755 - PB1 SINE Alu -7 120 51 2 762 400 169 23 46 chr13 23211046 23211133 -97073179 - B1_Mus2 SINE Alu -1 146 62 2 762 704 229 24 43 chr13 23211182 23211346 -97072966 + RSINE1 SINE B4 3 163 -2 2 762 441 161 0 0 chr13 23211465 23211552 -97072760 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 762 1396 249 68 50 chr13 23211830 23212312 -97072000 + RLTR16 LTR ERVK 1 491 -14 2 762 238 268 0 7 chr13 23212686 23212759 -97071553 + B3A SINE B2 2 72 -144 2 762 219 290 126 21 chr13 23213973 23214068 -97070244 + PB1D10 SINE Alu 10 114 -3 2 762 206 121 0 0 chr13 23216144 23216177 -97068135 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 2 762 1872 131 254 31 chr13 23216709 23217157 -97067155 - RLTR6_Mm LTR ERV1 -70 584 37 2 762 683 252 9 38 chr13 23218207 23218417 -97065895 - B3 SINE B2 -12 204 1 2 762 705 46 28 0 chr13 23218714 23218822 -97065490 - L1Md_F2 LINE L1 -1 6581 6471 2 762 433 294 64 25 chr13 23219315 23219472 -97064840 + RSINE1 SINE B4 3 165 0 2 762 843 199 22 17 chr13 23219867 23220046 -97064266 + ORR1C1 LTR MaLR 1 180 -198 2 762 220 170 18 36 chr13 23220052 23220107 -97064205 + CT-rich Low_complexity Low_complexity 1 54 0 2 762 320 287 10 19 chr13 23220109 23220212 -97064100 + L1MD LINE L1 3617 3718 -2428 2 762 2008 207 55 44 chr13 23220218 23220875 -97063437 + L1_Mur3 LINE L1 4195 4858 -1022 2 762 1762 241 60 18 chr13 23220880 23221430 -97062882 + RMER1B Other Other 494 1066 0 2 762 2435 247 38 21 chr13 23221440 23222200 -97062112 + L1_Mur3 LINE L1 4950 5722 -158 2 762 4483 59 0 9 chr13 23222201 23222746 -97061566 + L1Md_F2 LINE L1 6043 6582 0 2 762 4281 174 23 48 chr13 23222746 23223646 -97060666 + RMER3D-int LTR ERVK 1964 2841 -1 2 762 1071 131 86 10 chr13 23223647 23223856 -97060456 + RLTR31_Mm LTR ERVK 1 225 -336 2 762 933 181 41 23 chr13 23223868 23224089 -97060223 + MYSERV16_I-int LTR ERVK 1429 1653 -673 2 762 34 0 0 0 chr13 23224515 23224549 -97059763 + AT_rich Low_complexity Low_complexity 1 34 0 2 762 862 274 54 0 chr13 23224564 23224768 -97059544 - B3 SINE B2 0 216 2 2 762 248 326 122 35 chr13 23225710 23225939 -97058373 - MIRb SINE MIR -18 250 2 2 762 1154 57 16 9 chr13 23226157 23226585 -97057727 + (TG)n Simple_repeat Simple_repeat 1 430 0 2 762 485 298 0 5 chr13 23230877 23231071 -97053241 + MMTV-int LTR ERVK 1513 1689 -5564 2 762 293 292 0 30 chr13 23231970 23232069 -97052243 + MMTV-int LTR ERVK 5187 5282 -1971 2 762 225 211 0 0 chr13 23232798 23232836 -97051476 + RLTR13D3 LTR ERVK 1 38 -1076 2 762 2524 223 97 64 chr13 23233282 23233978 -97050334 + L1_Mus2 LINE L1 244 971 -5753 2 762 1165 45 0 8 chr13 23233978 23234112 -97050200 + B1_Mm SINE Alu 2 134 -13 2 762 219 36 0 0 chr13 23234112 23234140 -97050172 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 762 8143 130 11 22 chr13 23234140 23235679 -97048633 + L1_Mus2 LINE L1 972 2504 -3379 2 762 8686 101 6 15 chr13 23235672 23235729 -97048583 + L1_Mus2 LINE L1 4632 4687 -1196 2 762 1233 51 0 0 chr13 23235729 23235867 -97048445 + B1_Mm SINE Alu 2 139 -8 2 762 243 0 0 0 chr13 23235867 23235894 -97048418 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 762 8686 87 12 9 chr13 23235894 23237352 -97046960 + L1_Mus2 LINE L1 4688 6145 -421 2 762 1991 55 4 0 chr13 23237352 23237587 -97046725 + L1_Mus2 LINE L1 6332 6567 0 2 762 252 132 0 0 chr13 23237630 23237668 -97046644 + B2_Mm2 SINE B2 1 38 -157 2 762 370 188 135 71 chr13 23237961 23238087 -97046225 + RLTR13D3 LTR ERVK 981 1114 0 2 762 774 308 43 50 chr13 23238744 23239165 -97045147 + MMERGLN-int LTR ERV1 1453 1870 -5686 2 762 253 282 0 0 chr13 23239226 23239297 -97045015 + MMERGLN-int LTR ERV1 2127 2197 -5581 2 762 516 331 39 29 chr13 23239369 23239680 -97044632 + MuRRS4-int LTR ERV1 2079 2392 -5209 2 762 484 316 73 73 chr13 23239754 23240178 -97044134 + MuLV-int LTR ERV1 4027 4450 -3156 2 762 1363 311 46 9 chr13 23240544 23241303 -97043009 + MuRRS4-int LTR ERV1 3536 3919 -1144 2 762 622 338 0 11 chr13 23241841 23242110 -97042202 + MMERGLN-int LTR ERV1 7447 7712 -66 2 762 2344 149 33 159 chr13 23242202 23242712 -97041600 + RLTR41 LTR ERV1 1 446 0 2 762 305 256 121 24 chr13 23242718 23242842 -97041470 + MT2A LTR ERVL 293 428 -105 2 762 281 192 82 0 chr13 23242962 23243035 -97041277 + MLT2B5 LTR ERVL 477 555 0 2 762 243 0 0 0 chr13 23243285 23243312 -97041000 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 762 2262 200 35 13 chr13 23243313 23243775 -97040537 - RMER15 LTR ERVL -103 472 1 2 762 1479 63 58 5 chr13 23243877 23244084 -97040228 - L1_Mus3 LINE L1 0 6638 6421 2 762 3632 168 9 5 chr13 23244194 23244768 -97039544 - Lx2B LINE L1 -2 6998 6423 2 762 3769 20 0 0 chr13 23245699 23246095 -97038217 - MTA_Mm LTR MaLR 0 396 1 2 762 253 247 0 27 chr13 23247746 23247821 -97036491 + (CATATA)n Simple_repeat Simple_repeat 5 77 0 2 762 606 14 0 0 chr13 23248081 23248152 -97036160 + (GAAA)n Simple_repeat Simple_repeat 1 71 0 2 762 1405 249 40 81 chr13 23249005 23249485 -97034827 + RLTR28B LTR ERVL 1 460 -21 2 762 579 53 0 0 chr13 23249669 23249744 -97034568 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 762 220 259 19 0 chr13 23249943 23249997 -97034315 - B4 SINE B4 -235 57 3 2 762 333 209 39 108 chr13 23250271 23250373 -97033939 + MT2B LTR ERVL 163 257 -344 2 762 697 160 17 0 chr13 23250293 23250412 -97033900 + B1_Mus2 SINE Alu 21 141 -6 2 762 309 287 38 38 chr13 23251924 23252029 -97032283 + PB1D10 SINE Alu 13 117 0 2 762 307 256 158 30 chr13 23253697 23253830 -97030482 + B2_Mm2 SINE B2 36 185 -10 2 762 300 111 0 0 chr13 23254161 23254215 -97030097 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 762 511 330 20 30 chr13 23255627 23255830 -97028482 - B3 SINE B2 -15 201 1 2 762 180 0 0 0 chr13 23256361 23256381 -97027931 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 762 397 290 129 7 chr13 23257004 23257143 -97027169 + RSINE1 SINE B4 2 157 -8 2 762 28 29 0 0 chr13 23257157 23257192 -97027120 + AT_rich Low_complexity Low_complexity 1 35 0 2 762 232 207 86 0 chr13 23257429 23257487 -97026825 - L1MA5 LINE L1 -88 6212 6150 2 762 426 239 75 25 chr13 23259589 23259709 -97024603 - B1_Mus2 SINE Alu -10 137 12 2 762 14929 90 21 4 chr13 23259893 23262029 -97022283 - L1VL4 LINE L1 0 3559 1386 2 762 2191 77 31 16 chr13 23262029 23262346 -97021966 - RLTRETN_Mm LTR ERVK 0 322 1 2 762 26515 64 13 13 chr13 23262346 23268783 -97015529 - MMETn-int LTR ERVK -107 7299 1 2 762 2209 77 31 16 chr13 23268783 23269100 -97015212 - RLTRETN_Mm LTR ERVK 0 322 1 2 762 4868 104 37 0 chr13 23269101 23270239 -97014073 - L1VL4 LINE L1 -2169 1390 211 2 762 497 223 26 18 chr13 23270245 23270359 -97013953 - MT2C_Mm LTR ERVL -78 397 283 2 762 239 208 101 30 chr13 23270359 23270458 -97013854 - RMER1A Other Other -8 1022 917 3 762 782 281 197 29 chr13 23270627 23271186 -97013126 - RMER1B Other Other -195 871 73 3 762 508 227 9 0 chr13 23272003 23272113 -97012199 + MTD LTR MaLR 1 111 -308 3 762 278 196 9 105 chr13 23272129 23272243 -97012069 + Lx6 LINE L1 7347 7449 -11 3 762 3466 256 95 27 chr13 23272265 23273575 -97010737 - L1_Mur3 LINE L1 -2921 2959 1561 3 762 333 234 51 13 chr13 23273627 23273705 -97010607 - PB1D9 SINE Alu -12 108 28 3 762 3655 33 0 0 chr13 23274138 23274534 -97009778 + MTA_Mm LTR MaLR 1 396 0 3 762 597 322 9 28 chr13 23275039 23275256 -97009056 + B3 SINE B2 4 216 0 3 762 261 135 0 0 chr13 23276701 23276753 -97007559 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 762 778 216 43 32 chr13 23277081 23277268 -97007044 - B2_Mm2 SINE B2 -6 189 1 3 762 182 37 0 36 chr13 23277374 23277402 -97006910 + (TTA)n Simple_repeat Simple_repeat 2 28 0 3 762 210 250 0 118 chr13 23279252 23279320 -97004992 - PB1D10 SINE Alu -7 110 51 3 762 228 143 0 0 chr13 23280793 23280835 -97003477 + (T)n Simple_repeat Simple_repeat 1 42 0 3 762 722 152 16 0 chr13 23280836 23280961 -97003351 - B1_Mus2 SINE Alu 0 147 21 3 762 286 232 0 42 chr13 23281281 23281353 -97002959 + B4 SINE B4 3 71 -221 3 762 1361 240 85 13 chr13 23281798 23282187 -97002125 - RLTR28B LTR ERVL -48 433 17 3 762 1189 53 32 91 chr13 23282379 23282565 -97001747 - L1Md_F3 LINE L1 0 6584 6410 3 762 1068 254 84 49 chr13 23283067 23283411 -97000901 + RLTR9A LTR ERVK 13 368 0 3 762 369 0 0 0 chr13 23283750 23283791 -97000521 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 762 933 137 130 56 chr13 23283909 23284254 -97000058 + RMER16-int LTR ERVK 2083 2341 -4903 3 762 13089 127 44 40 chr13 23284356 23286267 -96998045 + RMER16-int LTR ERVK 1566 3424 -1982 3 762 4421 74 23 18 chr13 23286267 23286828 -96997484 + LTRIS2 LTR ERV1 1 564 0 3 762 13089 175 56 45 chr13 23286828 23287395 -96996917 + RMER16-int LTR ERVK 3425 3822 -1584 3 762 1105 233 94 57 chr13 23287889 23288240 -96996072 + RLTR9A LTR ERVK 1 364 -4 3 762 213 246 0 0 chr13 23288303 23288368 -96995944 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 762 296 316 116 13 chr13 23290500 23290811 -96993501 + L1MA9 LINE L1 5946 6288 -24 3 762 239 200 89 51 chr13 23290998 23291077 -96993235 - MLT2B5 LTR ERVL 0 555 474 3 762 403 293 37 59 chr13 23291185 23291500 -96992812 - MT2A LTR ERVL -87 446 101 3 762 290 339 116 0 chr13 23291460 23291581 -96992731 - MTE2a LTR MaLR -239 140 6 3 762 213 206 58 14 chr13 23294074 23294143 -96990169 + T-rich Low_complexity Low_complexity 5 76 0 3 762 192 111 0 0 chr13 23295701 23295737 -96988575 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 762 441 0 0 0 chr13 23295737 23295785 -96988527 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 762 713 245 40 85 chr13 23297124 23297347 -96986965 + B3 SINE B2 4 216 0 3 762 2578 102 78 10 chr13 23297615 23298000 -96986312 + IAPLTR2a LTR ERVK 1 411 0 3 762 3424 77 69 85 chr13 23298001 23298744 -96985568 + IAPEz-int LTR ERVK 9 662 -5819 3 762 2253 65 0 0 chr13 23298744 23299022 -96985290 + IAPEz-int LTR ERVK 1359 1636 -4845 3 762 6195 38 3 19 chr13 23299021 23299779 -96984533 + IAPEz-int LTR ERVK 5736 6481 0 3 762 1683 125 28 28 chr13 23299779 23300067 -96984245 + IAPLTR2a LTR ERVK 1 288 -187 3 762 25 0 0 0 chr13 23300076 23300101 -96984211 + AT_rich Low_complexity Low_complexity 1 25 0 3 762 3286 146 17 0 chr13 23300101 23300764 -96983548 + L1_Mur2 LINE L1 1030 1788 -4089 3 762 2667 209 128 28 chr13 23300765 23301455 -96982857 - RMER19B LTR ERVK -254 648 1 3 762 1907 151 2 61 chr13 23301455 23301864 -96982448 + L1_Mur2 LINE L1 1973 2357 -3520 3 762 616 300 66 121 chr13 23301886 23302356 -96981956 + RLTR12B LTR ERVK 42 485 -43 3 762 5731 149 30 25 chr13 23302447 23303560 -96980752 + L1_Mur2 LINE L1 2355 3473 -2404 3 762 3429 55 0 12 chr13 23303561 23303968 -96980344 + L1_Mus1 LINE L1 6164 6565 -2 3 762 1059 235 49 95 chr13 23303983 23304385 -96979927 + L1_Mur3 LINE L1 4772 5129 -751 3 762 3295 219 57 38 chr13 23304389 23304797 -96979515 + Lx6 LINE L1 6350 6745 -715 3 762 1417 66 55 0 chr13 23304797 23304978 -96979334 + B2_Mm2 SINE B2 2 192 -3 3 762 3295 219 57 38 chr13 23304978 23305012 -96979300 + Lx6 LINE L1 6746 6773 -687 3 762 1985 209 92 75 chr13 23305012 23305535 -96978777 - RMER16 LTR ERVK 0 533 2 3 762 3295 219 57 38 chr13 23305535 23305851 -96978461 + Lx6 LINE L1 6774 7123 -337 3 762 203 125 25 0 chr13 23306439 23306479 -96977833 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 3 762 192 40 0 0 chr13 23308913 23308938 -96975374 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 762 21 0 0 0 chr13 23309253 23309274 -96975038 + AT_rich Low_complexity Low_complexity 1 21 0 3 762 576 269 57 57 chr13 23310365 23310395 -96973917 - B3 SINE B2 -4 212 188 3 762 585 0 0 0 chr13 23310395 23310460 -96973852 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 762 513 0 0 0 chr13 23310460 23310516 -96973796 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 762 576 269 57 57 chr13 23310516 23310693 -96973619 - B3 SINE B2 -29 187 5 3 762 506 310 11 44 chr13 23311645 23311827 -96972485 - B3A SINE B2 -1 197 22 3 762 501 261 141 0 chr13 23312085 23312227 -96972085 + RSINE1 SINE B4 4 165 0 3 762 280 252 49 62 chr13 23312569 23312717 -96971595 + L1MB2 LINE L1 5827 5971 -320 3 762 25 51 0 0 chr13 23312746 23312785 -96971527 + AT_rich Low_complexity Low_complexity 1 39 0 3 762 401 256 186 89 chr13 23312861 23313097 -96971215 - RLTR24 LTR ERV1 0 529 271 3 762 343 307 75 62 chr13 23313118 23313278 -96971034 - RLTR24 LTR ERV1 -367 162 1 3 762 297 0 0 0 chr13 23313562 23313595 -96970717 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 3 762 1851 229 77 5 chr13 23313601 23314018 -96970294 - Lx6 LINE L1 -176 7284 6838 3 762 574 219 15 54 chr13 23314378 23314508 -96969804 + RMER20B LTR ERVK 1 125 -502 3 762 2395 132 85 5 chr13 23314903 23315293 -96969019 + MTC LTR MaLR 1 421 0 3 762 3393 96 125 55 chr13 23316860 23317388 -96966924 - RMER2 LTR ERV1 -2 565 1 3 762 622 210 113 0 chr13 23318585 23318709 -96965603 + B1_Mus1 SINE Alu 11 148 0 3 762 281 118 20 0 chr13 23318709 23318760 -96965552 + (GAAA)n Simple_repeat Simple_repeat 4 55 0 3 762 243 0 0 0 chr13 23319330 23319357 -96964955 + (CATTT)n Simple_repeat Simple_repeat 4 30 0 3 762 481 296 14 21 chr13 23319736 23319881 -96964431 - B1_Mur1 SINE Alu 0 149 6 3 762 315 161 0 0 chr13 23319895 23319951 -96964361 + CT-rich Low_complexity Low_complexity 3 58 0 3 762 734 225 28 0 chr13 23319961 23320103 -96964209 - B1_Mur3 SINE Alu -1 148 3 3 762 365 140 32 15 chr13 23320675 23320752 -96963560 - ORR1D1 LTR MaLR -214 160 51 3 762 21 57 0 0 chr13 23322021 23322056 -96962256 + AT_rich Low_complexity Low_complexity 1 35 0 3 762 468 263 156 28 chr13 23322066 23322207 -96962105 - RSINE1 SINE B4 -4 161 3 3 762 617 269 11 44 chr13 23322479 23322662 -96961650 + B3A SINE B2 22 198 0 3 762 601 278 9 70 chr13 23323574 23323787 -96960525 + B3 SINE B2 2 201 -15 3 762 273 128 0 0 chr13 23325182 23325229 -96959083 + (TC)n Simple_repeat Simple_repeat 2 48 0 3 762 21 36 0 0 chr13 23325603 23325631 -96958681 + AT_rich Low_complexity Low_complexity 1 28 0 3 762 25 0 0 0 chr13 23327175 23327200 -96957112 + AT_rich Low_complexity Low_complexity 1 25 0 3 762 235 299 30 40 chr13 23327345 23327446 -96956866 - PB1D10 SINE Alu 0 117 18 3 762 4118 235 46 29 chr13 23328872 23329826 -96954486 + Lx6 LINE L1 6319 7288 -172 3 762 363 23 0 0 chr13 23329995 23330039 -96954273 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 762 74 12 0 0 chr13 23330224 23330305 -96954007 + AT_rich Low_complexity Low_complexity 1 81 0 3 95 383 306 148 17 chr13 23330618 23330854 -96953458 + B4A SINE B4 3 269 -23 3 763 336 48 0 0 chr13 23330923 23330965 -96953347 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 763 188 34 0 33 chr13 23331539 23331569 -96952743 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 763 315 157 48 0 chr13 23332210 23332293 -96952019 + CT-rich Low_complexity Low_complexity 2 88 0 3 763 218 288 0 17 chr13 23332743 23332803 -96951509 + GA-rich Low_complexity Low_complexity 5 63 0 3 763 914 34 0 17 chr13 23332814 23332933 -96951379 + (GGAGA)n Simple_repeat Simple_repeat 2 118 0 3 763 456 253 143 13 chr13 23334231 23334455 -96949857 + L1MA9 LINE L1 5950 6202 -110 3 763 252 365 6 67 chr13 23334830 23335009 -96949303 - MT2A LTR ERVL -266 267 100 3 763 282 205 0 71 chr13 23335313 23335366 -96948946 - RMER16 LTR ERVK 0 533 481 3 763 432 0 0 0 chr13 23335366 23335414 -96948898 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 3 763 282 205 0 71 chr13 23335414 23335444 -96948868 - RMER16 LTR ERVK -53 480 456 3 763 1614 68 5 5 chr13 23335466 23335686 -96948626 - RMER16 LTR ERVK -64 469 250 3 763 6877 86 12 2 chr13 23335686 23336666 -96947646 + MusHAL1 LINE L1 1096 2085 -627 3 763 2701 162 10 34 chr13 23336747 23337251 -96947061 + Lx5 LINE L1 5348 5839 -38 3 763 330 132 0 0 chr13 23337322 23337375 -96946937 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 763 1143 165 110 0 chr13 23337828 23338046 -96946266 + Lx5 LINE L1 5836 6077 -973 3 763 600 291 36 16 chr13 23338039 23338231 -96946081 + Lx7 LINE L1 7049 7244 -452 3 763 237 119 0 0 chr13 23338261 23338303 -96946009 + (TTG)n Simple_repeat Simple_repeat 2 43 0 3 763 576 294 30 5 chr13 23339873 23340071 -96944241 + B3 SINE B2 2 204 -12 3 763 217 239 38 34 chr13 23342546 23342626 -96941686 - MIRm SINE MIR -2 260 195 3 763 659 221 8 8 chr13 23344616 23344748 -96939564 - B1_Mur2 SINE Alu -17 132 1 3 763 335 289 139 39 chr13 23344748 23344973 -96939339 + MTE2b LTR MaLR 5 244 -135 3 763 22 0 0 0 chr13 23345470 23345492 -96938820 + AT_rich Low_complexity Low_complexity 1 22 0 3 763 510 240 189 8 chr13 23345493 23345615 -96938697 - B1_Mur2 SINE Alu 0 149 6 3 763 297 253 11 11 chr13 23345651 23345743 -96938569 + Lx9 LINE L1 7392 7483 -161 3 763 214 340 59 59 chr13 23346539 23346708 -96937604 - L2 LINE L2 -669 2750 2582 3 763 188 250 0 0 chr13 23346802 23346842 -96937470 - L2 LINE L2 -960 2459 2420 3 763 1637 207 80 102 chr13 23347189 23347726 -96936586 - RLTR11A LTR ERVK 0 528 4 3 763 8227 156 98 87 chr13 23347729 23349674 -96934638 - MYSERV16_I-int LTR ERVK -1 2325 307 3 763 417 145 14 0 chr13 23349674 23349743 -96934569 + ORR1B2 LTR MaLR 280 349 -18 3 763 185 264 17 86 chr13 23349994 23350052 -96934260 + L3 LINE CR1 841 894 -3595 4 763 2716 107 43 0 chr13 23350749 23351141 -96933171 + RMER16-int LTR ERVK 2296 2704 -2702 4 763 3727 66 42 2 chr13 23351148 23351605 -96932707 - MT2C_Mm LTR ERVL 0 475 1 4 763 311 26 0 0 chr13 23351605 23351643 -96932669 - MERVL-int LTR ERVL 0 5485 5448 4 763 235 100 37 74 chr13 23351643 23351697 -96932615 - ORR1A3-int LTR MaLR -1323 640 589 4 763 4661 101 27 15 chr13 23351714 23352381 -96931931 + RMER16-int LTR ERVK 2734 3408 -1998 4 763 3647 41 0 128 chr13 23352381 23352881 -96931431 + RLTR10C LTR ERVK 1 436 0 4 763 1423 99 26 7 chr13 23352881 23353191 -96931121 + MMERVK10C-int LTR ERVK 1 399 -7182 4 763 42504 41 2 1 chr13 23353189 23358121 -96926191 + MMERVK10C-int LTR ERVK 870 5810 -1771 4 763 8096 37 0 18 chr13 23358107 23358148 -96926164 + MMERVK10C-int LTR ERVK 6646 6686 -895 4 763 249 57 0 0 chr13 23358148 23358183 -96926129 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 763 8096 37 0 18 chr13 23358183 23359094 -96925218 + MMERVK10C-int LTR ERVK 6687 7581 0 4 763 3896 37 7 0 chr13 23359094 23359527 -96924785 + RLTR10C LTR ERVK 1 436 0 4 763 2543 115 30 18 chr13 23359527 23359792 -96924520 + RMER16-int LTR ERVK 3403 3676 -1730 4 763 713 78 11 0 chr13 23359792 23359882 -96924430 + 4.5SRNA scRNA scRNA 1 91 -3 4 763 1233 68 0 0 chr13 23359882 23360029 -96924283 + B1_Mus1 SINE Alu 2 148 0 4 763 2543 115 30 18 chr13 23360029 23360159 -96924153 + RMER16-int LTR ERVK 3677 3803 -1603 4 763 311 254 47 21 chr13 23360384 23360484 -96923828 - PB1D9 SINE Alu -12 108 5 4 763 680 0 12 0 chr13 23360954 23361034 -96923278 + (TC)n Simple_repeat Simple_repeat 2 82 0 4 763 216 0 0 0 chr13 23361478 23361502 -96922810 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 4 763 216 0 0 0 chr13 23361619 23361643 -96922669 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 763 926 50 84 0 chr13 23361643 23361762 -96922550 - B1_Mus2 SINE Alu -18 129 1 4 763 212 192 0 19 chr13 23361945 23361998 -96922314 + A-rich Low_complexity Low_complexity 4 55 0 4 763 556 0 0 229 chr13 23362289 23362385 -96921927 - tRNA-Ile-ATA tRNA tRNA -3 74 1 4 763 360 288 88 14 chr13 23362734 23362882 -96921430 - Lx8 LINE L1 -372 7101 6943 4 763 1582 264 105 57 chr13 23362891 23363785 -96920527 - L1M3 LINE L1 -1756 4384 3448 4 763 677 230 8 0 chr13 23363801 23363927 -96920385 + B1_Mus2 SINE Alu 5 131 -16 4 763 677 212 111 68 chr13 23364151 23364358 -96919954 - B3 SINE B2 0 216 1 4 763 5648 144 2 5 chr13 23364391 23365324 -96918988 - L1_Mur1 LINE L1 -2037 3849 2920 4 763 9409 132 35 12 chr13 23365318 23368013 -96916299 + Lx2 LINE L1 4228 6996 -1 4 763 1734 176 189 70 chr13 23368969 23369366 -96914946 + RLTR41 LTR ERV1 1 444 -2 4 763 426 39 0 0 chr13 23369392 23369444 -96914868 + (TTCTG)n Simple_repeat Simple_repeat 4 55 0 4 763 396 197 0 0 chr13 23369839 23369905 -96914407 + tRNA-Glu-GAG_ tRNA tRNA 10 75 0 4 763 2348 41 0 118 chr13 23369935 23370266 -96914046 - RLTR10B LTR ERVK 0 292 1 4 763 454 260 120 33 chr13 23370635 23370818 -96913494 + RLTR41 LTR ERV1 248 446 0 4 763 661 235 50 88 chr13 23370823 23371061 -96913251 + RLTR16 LTR ERVK 171 399 -106 4 763 291 114 0 0 chr13 23371064 23371108 -96913204 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 4 763 279 196 125 45 chr13 23371111 23371287 -96913025 + RMER17C LTR ERVK 83 272 -138 4 763 432 0 0 0 chr13 23371309 23371357 -96912955 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 763 554 198 0 0 chr13 23371357 23371448 -96912864 + RLTR16 LTR ERVK 415 505 0 4 763 414 255 20 66 chr13 23371568 23371719 -96912593 + RMER3D-int LTR ERVK 100 243 -2599 4 763 1240 55 7 0 chr13 23371734 23371879 -96912433 + B1_Mus2 SINE Alu 1 146 -1 4 763 1127 140 83 6 chr13 23372050 23372208 -96912104 + B2_Mm2 SINE B2 2 158 -37 4 763 279 0 0 0 chr13 23372208 23372239 -96912073 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 4 763 1127 140 83 6 chr13 23372239 23372250 -96912062 + B2_Mm2 SINE B2 159 183 -12 4 763 1010 76 114 0 chr13 23372250 23372382 -96911930 + B1_Mus2 SINE Alu 1 147 0 4 763 278 240 216 37 chr13 23372406 23372540 -96911772 + RMER3D-int LTR ERVK 1221 1378 -1464 4 763 2735 179 77 50 chr13 23372521 23372796 -96911516 + MYSERV16_I-int LTR ERVK 263 558 -1768 4 763 3440 46 179 5 chr13 23372796 23373232 -96911080 - RLTR1B LTR ERV1 0 512 1 4 763 2735 179 77 50 chr13 23373232 23373592 -96910720 + MYSERV16_I-int LTR ERVK 559 915 -1411 4 763 1106 233 92 62 chr13 23373592 23373976 -96910336 + RMER16 LTR ERVK 1 490 -43 4 763 459 231 43 87 chr13 23375044 23375077 -96909235 + ID_B1 SINE B4 70 223 -1 4 763 748 157 47 8 chr13 23375077 23375205 -96909107 + B1_Mur2 SINE Alu 15 147 -2 4 763 533 126 0 35 chr13 23375214 23375329 -96908983 + GA-rich Low_complexity Low_complexity 3 113 0 4 763 491 299 91 51 chr13 23376604 23377141 -96907171 + L1MA8 LINE L1 5451 6003 -297 4 763 643 41 0 0 chr13 23377269 23377342 -96906970 + tRNA-Val-GTY tRNA tRNA 1 73 -3 4 763 595 96 0 0 chr13 23377517 23377590 -96906722 + tRNA-Ala-GCY tRNA tRNA 1 73 -3 4 763 309 71 0 0 chr13 23378400 23378442 -96905870 + tRNA-Val-GTG tRNA tRNA 1 42 -34 4 763 282 301 53 27 chr13 23379266 23379416 -96904896 + MIRb SINE MIR 1 154 -114 4 763 735 207 200 132 chr13 23379566 23380013 -96904299 - MT2A LTR ERVL -4 580 1 4 763 260 290 0 0 chr13 23380421 23380490 -96903822 + tRNA-Met tRNA tRNA 5 73 -3 4 763 3041 266 29 21 chr13 23380995 23381837 -96902475 - Lx7 LINE L1 -1262 6434 5587 4 763 306 0 0 0 chr13 23381844 23381878 -96902434 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 4 763 660 214 0 22 chr13 23381878 23382012 -96902300 - B1_Mur3 SINE Alu -13 136 6 4 763 324 340 42 7 chr13 23381899 23382041 -96902271 - B4 SINE B4 -88 204 58 4 763 4441 209 53 73 chr13 23382041 23383250 -96901062 - Lx7 LINE L1 -308 5572 4388 4 763 3381 51 0 15 chr13 23383892 23384290 -96900022 - MTA_Mm LTR MaLR -4 392 1 4 763 3240 103 108 8 chr13 23384290 23384880 -96899432 - MTA_Mm-int LTR MaLR 0 1258 528 4 763 1977 60 19 0 chr13 23384866 23385134 -96899178 - MTA_Mm-int LTR MaLR -825 273 1 4 763 3393 58 0 5 chr13 23385134 23385532 -96898780 - MTA_Mm LTR MaLR 0 396 1 4 763 11266 203 102 16 chr13 23385534 23386837 -96897475 - Lx7 LINE L1 -1493 4387 2992 4 763 201 74 0 0 chr13 23386837 23386864 -96897448 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 763 11266 203 102 16 chr13 23386864 23388479 -96895833 - Lx7 LINE L1 -2889 2991 1220 4 763 296 139 0 0 chr13 23388480 23388523 -96895789 - ORR1B2 LTR MaLR -8 359 317 4 763 309 102 20 0 chr13 23388519 23388568 -96895744 + ORR1B1-int LTR MaLR 571 620 -889 4 763 269 230 97 65 chr13 23388550 23388578 -96895734 + ORR1B1-int LTR MaLR 844 868 -1095 4 763 598 245 56 28 chr13 23388578 23388721 -96895591 + B1_Mur3 SINE Alu 3 149 0 4 763 3741 138 88 20 chr13 23388721 23389390 -96894922 + ORR1B1-int LTR MaLR 796 1508 -1 4 763 1967 180 124 14 chr13 23389391 23389746 -96894566 + ORR1B1 LTR MaLR 1 394 0 4 763 383 155 56 0 chr13 23390069 23390140 -96894172 - B3 SINE B2 -137 79 5 4 763 533 276 82 28 chr13 23390234 23390525 -96893787 + L1MA8 LINE L1 5694 6000 -291 4 763 645 55 0 0 chr13 23390649 23390722 -96893590 + tRNA-Val-GTY tRNA tRNA 1 73 -3 4 763 595 96 0 0 chr13 23390929 23391002 -96893310 + tRNA-Ala-GCY tRNA tRNA 1 73 -3 4 763 353 199 29 22 chr13 23391465 23391604 -96892708 + GA-rich Low_complexity Low_complexity 1 140 0 4 763 623 66 0 0 chr13 23391990 23392066 -96892246 + tRNA-Val-GTG tRNA tRNA 1 76 0 4 763 959 268 28 34 chr13 23392145 23392544 -96891768 - RLTR28B LTR ERVL -2 479 1 4 763 636 121 44 18 chr13 23392744 23392872 -96891440 - ORR1A2 LTR MaLR 0 327 240 4 763 1252 132 14 33 chr13 23392872 23393083 -96891229 - URR1B DNA MER1_type -18 207 1 4 763 265 273 29 57 chr13 23393675 23393780 -96890532 + MIRc SINE MIR 52 153 -115 4 763 1682 237 45 43 chr13 23393787 23394135 -96890177 - Lx7 LINE L1 -1597 6099 5762 4 763 333 0 0 0 chr13 23394135 23394172 -96890140 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 4 763 1682 237 45 43 chr13 23394172 23394335 -96889977 - Lx7 LINE L1 -1935 5761 5587 4 763 731 186 7 35 chr13 23394342 23394487 -96889825 - B1F2 SINE Alu -3 146 6 4 763 448 256 42 95 chr13 23394487 23394508 -96889804 - B4 SINE B4 -68 222 66 4 763 727 147 244 0 chr13 23394508 23394664 -96889648 - Lx7 LINE L1 -301 5579 5386 4 763 2519 89 9 41 chr13 23394674 23395091 -96889221 - RMER16 LTR ERVK 0 533 1 4 763 8996 210 67 36 chr13 23395096 23395757 -96888555 - Lx7 LINE L1 -552 5328 4627 4 763 183 42 0 0 chr13 23395757 23395781 -96888531 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 763 8996 210 67 36 chr13 23395781 23397386 -96886926 - Lx7 LINE L1 -1254 4626 3003 4 763 423 0 0 0 chr13 23397386 23397433 -96886879 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 763 8996 210 67 36 chr13 23397433 23397552 -96886760 - Lx7 LINE L1 -2878 3002 2869 4 763 607 205 293 29 chr13 23397548 23397794 -96886518 - Lx7 LINE L1 -3617 2263 1953 4 763 477 196 52 29 chr13 23397774 23397947 -96886365 - Lx7 LINE L1 -4487 1393 1217 4 763 1907 191 11 22 chr13 23397956 23398319 -96885993 - ORR1B2 LTR MaLR -8 359 1 4 763 846 259 70 27 chr13 23398328 23398658 -96885654 - Lx7 LINE L1 -6529 1199 856 4 763 664 27 0 0 chr13 23399497 23399570 -96884742 + tRNA-Val-GTG tRNA tRNA 1 73 -3 4 763 255 146 24 0 chr13 23399763 23399804 -96884508 + tRNA-Ala-GCY tRNA tRNA 1 42 -34 4 763 250 265 56 42 chr13 23400153 23400224 -96884088 + ID4_ SINE ID 2 73 -10 4 763 262 273 45 0 chr13 23400166 23400232 -96884080 + tRNA-Ala-GCY_ tRNA tRNA 7 75 0 4 763 710 0 0 0 chr13 23400919 23400994 -96883318 - tRNA-Ile-ATT tRNA tRNA -2 75 1 4 763 30 0 0 0 chr13 23402441 23402471 -96881841 + AT_rich Low_complexity Low_complexity 1 30 0 4 763 706 256 25 0 chr13 23402698 23402858 -96881454 - B3A SINE B2 -13 185 22 4 763 454 122 0 63 chr13 23403592 23403671 -96880641 - tRNA-Ile-ATT tRNA tRNA -3 74 1 4 763 3586 62 2 0 chr13 23403740 23404184 -96880128 + L1_Mus1 LINE L1 6139 6567 0 4 763 1293 102 23 6 chr13 23404197 23404374 -96879938 + B2_Mm2 SINE B2 2 181 -14 4 763 2216 153 58 0 chr13 23405775 23406134 -96878178 - RLTR14 LTR ERV1 0 382 3 4 763 360 0 0 0 chr13 23406236 23406276 -96878036 + (CATA)n Simple_repeat Simple_repeat 1 40 0 4 763 23 0 0 0 chr13 23406278 23406301 -96878011 + AT_rich Low_complexity Low_complexity 1 23 0 4 763 980 180 0 0 chr13 23406301 23406451 -96877861 + B1_Mur4 SINE Alu 1 150 0 4 763 540 341 40 88 chr13 23406478 23406729 -96877583 - B4 SINE B4 -2 290 52 4 763 23 0 0 0 chr13 23407028 23407051 -96877261 + AT_rich Low_complexity Low_complexity 1 23 0 4 763 24 85 0 0 chr13 23407160 23407219 -96877093 + AT_rich Low_complexity Low_complexity 1 59 0 4 763 294 246 320 8 chr13 23407243 23407365 -96876947 - B3A SINE B2 -18 180 21 4 763 234 225 92 81 chr13 23407951 23408038 -96876274 - B1_Mur2 SINE Alu 0 149 62 4 763 2121 161 13 38 chr13 23408220 23408614 -96875698 + MTC LTR MaLR 38 421 0 4 763 183 230 267 13 chr13 23408671 23408746 -96875566 + MIRc SINE MIR 65 158 -110 4 763 624 68 0 0 chr13 23409334 23409407 -96874905 + tRNA-Met tRNA tRNA 1 73 -3 4 763 1008 224 82 33 chr13 23410587 23410891 -96873421 - ORR1D2 LTR MaLR -51 319 1 4 763 393 298 92 58 chr13 23410891 23411095 -96873217 + MLT1E2 LTR MaLR 123 333 -294 4 763 230 207 17 33 chr13 23411830 23411890 -96872422 + L1M4c LINE L1 28 86 -6521 4 763 875 254 53 44 chr13 23411861 23412302 -96872010 + L1M4c LINE L1 1628 2094 -4749 4 763 724 259 30 37 chr13 23412315 23412479 -96871833 + RSINE1 SINE B4 3 165 0 5 763 924 251 75 28 chr13 23412852 23413212 -96871100 + L1M4c LINE L1 5534 5910 -834 4 763 472 189 11 11 chr13 23413363 23413454 -96870858 - B1_Mus2 SINE Alu -2 145 55 5 763 1419 155 142 14 chr13 23413451 23413739 -96870573 + ORR1C2 LTR MaLR 48 372 -12 5 763 384 148 1 0 chr13 23413739 23413811 -96870501 + ORR1D2 LTR MaLR 301 370 -14 5 763 225 261 0 0 chr13 23413835 23413881 -96870431 - Lx8 LINE L1 -381 7092 7047 5 763 242 250 130 40 chr13 23413952 23414052 -96870260 - Lx8 LINE L1 -467 7006 6898 5 763 526 275 83 78 chr13 23414300 23414493 -96869819 + B3A SINE B2 1 194 -4 5 763 269 267 137 32 chr13 23414546 23414561 -96869751 + MT2B LTR ERVL 169 245 -356 5 763 522 179 10 50 chr13 23414561 23414661 -96869651 + B1_Mur2 SINE Alu 37 132 -17 5 763 186 171 0 0 chr13 23415151 23415192 -96869120 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 763 985 146 2 2 chr13 23415289 23415461 -96868851 + B2_Mm2 SINE B2 1 172 -21 5 763 2490 24 3 0 chr13 23416101 23416398 -96867914 + MTA_Mm LTR MaLR 1 298 -98 5 763 2993 12 3 0 chr13 23416398 23416719 -96867593 - RLTRETN_Mm LTR ERVK 0 322 1 5 763 42360 24 4 4 chr13 23416719 23421563 -96862749 - MMETn-int LTR ERVK 0 4844 1 5 763 3038 12 0 0 chr13 23421563 23421885 -96862427 - RLTRETN_Mm LTR ERVK 0 322 1 5 763 716 22 98 0 chr13 23421887 23421979 -96862333 + MTA_Mm LTR MaLR 295 395 -1 5 763 1089 91 6 17 chr13 23421979 23422158 -96862154 + (GGAA)n Simple_repeat Simple_repeat 4 180 0 5 763 485 328 21 21 chr13 23422185 23422428 -96861884 + RMER16-int LTR ERVK 1317 1559 -4608 5 763 331 269 52 7 chr13 23422593 23422728 -96861584 + RMER16-int LTR ERVK 1689 1829 -4338 5 763 420 338 83 65 chr13 23422784 23423304 -96861008 + RMER16-int LTR ERVK 1914 2442 -3725 5 763 2168 297 47 38 chr13 23423668 23424901 -96859411 + RMER16-int LTR ERVK 1513 3661 -4556 5 763 547 123 12 0 chr13 23424892 23424973 -96859339 + RMER16-int LTR ERVK 3898 3979 -1427 5 763 2959 241 101 28 chr13 23425212 23426149 -96858163 + RMER16-int LTR ERVK 3984 4989 -417 5 763 339 303 15 36 chr13 23426384 23426521 -96857791 + IAP-d-int LTR ERVK 6387 6520 -22 5 763 255 262 56 24 chr13 23426558 23426683 -96857629 + RMER16-int LTR ERVK 5253 5381 -25 5 763 219 283 0 19 chr13 23427173 23427227 -96857085 + PB1D7 SINE Alu 66 118 -2 5 763 1488 189 42 131 chr13 23427447 23427897 -96856415 + RMER17C LTR ERVK 1 410 0 5 763 559 261 0 0 chr13 23428049 23428160 -96856152 + B3A SINE B2 2 112 -86 5 763 513 32 0 0 chr13 23428176 23428239 -96856073 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 763 288 0 0 0 chr13 23428239 23428270 -96856042 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 763 5534 83 31 29 chr13 23428322 23429128 -96855184 + RLTR13C2 LTR ERVK 1 808 0 5 763 315 127 42 14 chr13 23429217 23429289 -96855023 + CT-rich Low_complexity Low_complexity 3 76 0 5 763 1064 73 0 0 chr13 23429289 23429426 -96854886 - B1_Mm SINE Alu 0 147 11 5 763 739 295 60 6 chr13 23429576 23429834 -96854478 + Lx8 LINE L1 6563 6861 -783 5 763 663 193 1 20 chr13 23429834 23429963 -96854349 + B1_Mur3 SINE Alu 13 136 -13 5 763 1254 285 45 16 chr13 23430022 23430468 -96853844 + Lx8 LINE L1 6876 7334 -139 5 763 962 268 79 3 chr13 23430712 23431030 -96853282 - L1MB1 LINE L1 -172 5996 5655 5 763 448 304 99 18 chr13 23431051 23431222 -96853090 - B3A SINE B2 -1 215 31 5 763 1140 84 28 0 chr13 23431222 23431365 -96852947 + B1_Mus2 SINE Alu 1 147 0 5 763 223 225 0 0 chr13 23431385 23431425 -96852887 - B3A SINE B2 -153 45 6 5 763 341 303 34 0 chr13 23431510 23431599 -96852713 - B3 SINE B2 -55 161 70 5 763 639 270 106 11 chr13 23431634 23431814 -96852498 + B3A SINE B2 2 198 0 5 763 656 146 173 31 chr13 23431821 23431948 -96852364 + B1_Mur4 SINE Alu 5 149 -1 5 763 395 291 12 0 chr13 23431959 23432045 -96852267 + PB1D10 SINE Alu 5 91 -26 5 763 358 173 186 119 chr13 23432074 23432192 -96852120 - B1_Mus1 SINE Alu -22 126 1 5 763 188 35 35 0 chr13 23432613 23432642 -96851670 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 5 763 288 0 0 0 chr13 23432642 23432674 -96851638 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 763 347 304 70 43 chr13 23432756 23433055 -96851257 + L1MC4 LINE L1 6923 7229 -813 5 763 3014 46 3 3 chr13 23433240 23433586 -96850726 - ORR1A1 LTR MaLR 0 346 1 5 763 756 196 29 179 chr13 23433622 23433654 -96850658 + RMER19C LTR ERVK 1 26 -585 5 763 246 62 0 0 chr13 23433654 23433686 -96850626 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 763 183 42 0 0 chr13 23433695 23433719 -96850593 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 763 756 196 29 179 chr13 23433719 23433955 -96850357 + RMER19C LTR ERVK 27 237 -374 5 763 288 0 0 0 chr13 23433990 23434022 -96850290 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 763 952 146 28 0 chr13 23434024 23434168 -96850144 - B2_Mm2 SINE B2 -45 150 3 5 763 696 266 48 0 chr13 23434210 23434398 -96849914 + RMER19C LTR ERVK 220 416 -195 5 763 512 314 60 25 chr13 23434473 23434672 -96849640 - MLT1E1A LTR MaLR -159 521 316 5 763 583 225 120 28 chr13 23434899 23435041 -96849271 + ID_B1 SINE B4 3 157 -67 5 763 863 258 30 30 chr13 23435041 23435241 -96849071 + B3 SINE B2 2 201 -15 5 763 351 211 79 0 chr13 23435307 23435383 -96848929 + ID_B1 SINE B4 143 224 0 5 763 663 306 135 14 chr13 23436441 23436658 -96847654 - B4A SINE B4 -5 287 44 5 763 506 212 30 0 chr13 23436658 23436757 -96847555 + ORR1D1 LTR MaLR 1 102 -272 5 763 31536 101 35 10 chr13 23436757 23442682 -96841630 + L1Md_F2 LINE L1 98 5586 -297 5 763 8008 65 5 37 chr13 23442682 23442897 -96841415 + L1Md_F2 LINE L1 5587 5797 -785 5 763 1311 48 0 0 chr13 23442897 23443044 -96841268 + B1_Mus2 SINE Alu 1 147 0 5 763 8008 65 5 37 chr13 23443044 23443848 -96840464 + L1Md_F2 LINE L1 5798 6573 -9 5 763 255 218 0 18 chr13 23443882 23443938 -96840374 + RMER13A LTR ERVK 1 55 -805 5 763 1057 236 75 15 chr13 23443961 23444228 -96840084 + RMER13A LTR ERVK 102 384 -476 5 763 421 316 80 7 chr13 23444309 23444446 -96839866 + RMER13A LTR ERVK 668 814 -46 5 763 452 226 77 14 chr13 23444469 23444618 -96839694 + ORR1D1 LTR MaLR 206 362 -12 5 763 1042 142 194 32 chr13 23444629 23444876 -96839436 + ORR1D1-int LTR MaLR 1 287 -1083 5 763 963 140 0 45 chr13 23445648 23445789 -96838523 + B1_Mur4 SINE Alu 1 139 -11 5 763 288 0 0 0 chr13 23445789 23445821 -96838491 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 5 763 963 140 0 45 chr13 23445821 23445836 -96838476 + B1_Mur4 SINE Alu 140 150 0 5 763 1310 75 29 6 chr13 23446525 23446699 -96837613 + B2_Mm1t SINE B2 2 179 -14 5 763 227 228 53 0 chr13 23447930 23447987 -96836325 - MMSAT4 Satellite Satellite -88 80 21 5 763 424 297 29 26 chr13 23448441 23449234 -96835078 - MMSAT4 Satellite Satellite -16 795 1 5 763 595 253 62 49 chr13 23449676 23449838 -96834474 + RSINE1 SINE B4 2 165 0 5 763 985 145 201 27 chr13 23450078 23450262 -96834050 - B3 SINE B2 0 216 1 5 763 444 299 109 22 chr13 23450298 23450435 -96833877 - RSINE1 SINE B4 -14 151 3 5 763 303 298 53 156 chr13 23451002 23451456 -96832856 + L2a LINE L2 1486 1892 -1527 5 763 423 308 83 67 chr13 23451592 23451846 -96832466 + L2a LINE L2 2973 3230 -196 5 763 226 324 59 0 chr13 23451895 23451963 -96832349 + L2a LINE L2 3331 3402 -24 5 763 486 313 40 35 chr13 23453242 23453444 -96830868 + L2a LINE L2 2548 2750 -669 5 763 228 284 95 0 chr13 23453465 23453539 -96830773 + MLT1B LTR MaLR 45 125 -265 5 763 402 337 132 9 chr13 23453778 23454236 -96830076 + L2a LINE L2 2775 3283 -143 5 763 954 187 71 0 chr13 23454364 23454562 -96829750 + B3 SINE B2 2 213 -3 5 763 1486 88 5 10 chr13 23454826 23455022 -96829290 + B2_Mm2 SINE B2 1 195 0 5 763 957 225 49 20 chr13 23455036 23455240 -96829072 + B3 SINE B2 2 211 -5 5 763 23 0 0 0 chr13 23455244 23455267 -96829045 + AT_rich Low_complexity Low_complexity 1 23 0 5 763 659 229 154 62 chr13 23455473 23455668 -96828644 - B3 SINE B2 -2 214 2 5 763 27 0 0 0 chr13 23455668 23455695 -96828617 + AT_rich Low_complexity Low_complexity 1 27 0 5 763 390 286 54 48 chr13 23455705 23455852 -96828460 + B1F1 SINE Alu 2 149 0 5 763 221 0 35 0 chr13 23455855 23455884 -96828428 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 763 240 56 0 100 chr13 23455954 23455994 -96828318 + B3 SINE B2 3 38 -178 5 763 1153 209 82 26 chr13 23455991 23456261 -96828051 - MTD LTR MaLR -132 287 3 5 763 694 214 121 6 chr13 23456280 23456454 -96827858 - B3A SINE B2 -3 195 2 5 763 243 182 0 18 chr13 23456508 23456564 -96827748 - B3 SINE B2 0 216 162 5 763 1451 186 157 0 chr13 23456566 23456878 -96827434 - ORR1D1 LTR MaLR -8 366 6 5 763 600 293 76 23 chr13 23456876 23457047 -96827265 - B3 SINE B2 -36 180 1 5 763 781 156 89 0 chr13 23457075 23457210 -96827102 - B1_Mus1 SINE Alu 0 148 2 5 763 30 59 0 0 chr13 23457268 23457319 -96826993 + AT_rich Low_complexity Low_complexity 1 51 0 5 763 479 265 79 22 chr13 23457620 23457759 -96826553 + B1F SINE Alu 3 149 0 5 763 333 280 23 53 chr13 23458075 23458207 -96826105 + L1MC4a LINE L1 6475 6602 -1280 5 763 302 338 164 7 chr13 23458277 23458429 -96825883 + L1MC4a LINE L1 6724 6899 -983 5 763 258 250 73 0 chr13 23458457 23458525 -96825787 - ID4_ SINE ID -9 74 2 5 763 296 191 15 31 chr13 23458534 23458599 -96825713 - PB1D10 SINE Alu -9 108 45 5 763 239 324 115 71 chr13 23458953 23459179 -96825133 + L2a LINE L2 3139 3374 -52 5 763 380 277 42 55 chr13 23459588 23459782 -96824530 - MIRb SINE MIR -59 209 1 5 763 346 250 59 111 chr13 23460323 23460458 -96823854 - B1F2 SINE Alu -2 147 20 5 763 427 266 7 141 chr13 23461634 23461783 -96822529 + RSINE1 SINE B4 4 132 -33 5 763 362 115 0 16 chr13 23461800 23461862 -96822450 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 764 22 0 0 0 chr13 23462026 23462048 -96822264 + AT_rich Low_complexity Low_complexity 1 22 0 5 764 884 188 81 25 chr13 23462100 23462297 -96822015 - B3 SINE B2 -7 209 2 5 764 24 32 0 0 chr13 23462297 23462328 -96821984 + AT_rich Low_complexity Low_complexity 1 31 0 5 764 524 293 40 26 chr13 23463384 23463535 -96820777 + RSINE1 SINE B4 12 164 -1 5 764 606 259 7 26 chr13 23464047 23464198 -96820114 + B1_Mur2 SINE Alu 1 148 -1 5 764 742 292 41 26 chr13 23464551 23464822 -96819490 + RLTR42-int LTR ERVK 1101 1375 -4147 5 764 1234 184 59 240 chr13 23465005 23465463 -96818849 + ORR1C2 LTR MaLR 9 383 -1 5 764 2300 130 48 13 chr13 23466077 23466450 -96817862 - ORR1B1 LTR MaLR -8 386 1 5 764 5010 155 64 35 chr13 23466469 23467464 -96816848 + L1_Mus1 LINE L1 210 1233 -5383 5 764 2559 87 6 3 chr13 23467464 23467812 -96816500 - IAPEY_LTR LTR ERVK 0 385 37 5 764 1299 104 5 5 chr13 23467817 23468039 -96816273 + L1_Mus1 LINE L1 1223 1444 -4439 5 764 1152 128 6 0 chr13 23468037 23468216 -96816096 + MusHAL1 LINE L1 1407 1586 -1126 5 764 7285 41 8 0 chr13 23468219 23469093 -96815219 - L1Md_F2 LINE L1 0 6582 5702 5 764 21821 92 10 0 chr13 23469081 23472830 -96811482 + L1_Mus1 LINE L1 2780 6565 -2 5 764 533 331 39 23 chr13 23472881 23473141 -96811171 + MER52-int LTR ERV1 4406 4669 -2422 5 764 364 355 35 23 chr13 23473406 23473663 -96810649 + MER52-int LTR ERV1 4976 5235 -1856 5 764 418 343 78 39 chr13 23473880 23474317 -96809995 + MER52-int LTR ERV1 5466 5919 -1172 5 764 225 94 0 0 chr13 23474666 23474698 -96809614 + (A)n Simple_repeat Simple_repeat 1 32 0 5 764 463 298 88 0 chr13 23475253 23475367 -96808945 + B3A SINE B2 55 178 -20 6 764 264 256 23 11 chr13 23476491 23476578 -96807734 + RMER5 LTR ERV1 336 423 -111 6 764 6987 91 23 6 chr13 23476578 23477577 -96806735 + RLTR13D2 LTR ERVK 1 1016 -7 6 764 468 209 52 9 chr13 23477580 23477696 -96806616 + RMER5 LTR ERV1 414 534 0 6 764 333 0 0 0 chr13 23478024 23478061 -96806251 + (GA)n Simple_repeat Simple_repeat 1 37 0 6 764 262 228 27 98 chr13 23478160 23478272 -96806040 + MT2B LTR ERVL 156 259 -342 6 764 505 234 0 0 chr13 23478186 23478293 -96806019 + B1_Mur3 SINE Alu 21 127 -22 6 764 324 0 0 0 chr13 23478294 23478330 -96805982 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 764 432 0 0 0 chr13 23478330 23478377 -96805935 + (GA)n Simple_repeat Simple_repeat 2 49 0 6 764 189 0 0 0 chr13 23479478 23479499 -96804813 + (T)n Simple_repeat Simple_repeat 1 21 0 6 764 628 62 0 0 chr13 23479509 23479589 -96804723 - B2_Mm1t SINE B2 -112 81 2 6 764 269 289 11 46 chr13 23479627 23479714 -96804598 + ID4 SINE ID 5 88 -64 6 764 895 244 8 11 chr13 23479735 23479943 -96804369 - B3A SINE B2 -12 204 1 6 764 693 184 512 8 chr13 23480195 23480440 -96803872 - ORR1D2 LTR MaLR -2 368 1 6 764 1463 221 75 11 chr13 23480440 23480788 -96803524 - ORR1D2 LTR MaLR 0 370 1 6 764 246 62 0 0 chr13 23481277 23481309 -96803003 + (ATGGTG)n Simple_repeat Simple_repeat 2 33 0 6 764 379 306 102 40 chr13 23481309 23481618 -96802694 - MLT1E2 LTR MaLR -65 440 123 6 764 986 229 86 36 chr13 23481618 23481922 -96802390 + ORR1D2 LTR MaLR 1 319 -51 6 764 240 298 131 0 chr13 23481915 23481999 -96802313 - MLT1E2 LTR MaLR -515 112 18 6 764 4141 90 0 2 chr13 23482093 23482615 -96801697 + L1_Mus4 LINE L1 6113 6633 -3 6 764 270 169 0 132 chr13 23483636 23483704 -96800608 - tRNA-Met_ tRNA tRNA -12 64 6 6 764 731 250 24 0 chr13 23484581 23484745 -96799567 + B3A SINE B2 22 189 -9 6 764 942 78 0 0 chr13 23484966 23485094 -96799218 + (TTC)n Simple_repeat Simple_repeat 2 129 0 6 764 7900 64 5 0 chr13 23485095 23486199 -96798113 - L1_Mus1 LINE L1 -7 6560 5452 6 764 29 0 0 0 chr13 23486221 23486250 -96798062 + AT_rich Low_complexity Low_complexity 1 29 0 6 764 699 13 0 0 chr13 23488928 23489003 -96795309 + tRNA-Ile-ATT tRNA tRNA 1 75 -2 6 764 278 286 57 0 chr13 23489685 23489755 -96794557 - ID4_ SINE ID -1 82 9 6 764 369 0 0 0 chr13 23490656 23490697 -96793615 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 764 226 262 49 0 chr13 23490779 23490840 -96793472 - tRNA-Met tRNA tRNA -3 73 10 6 764 307 291 38 30 chr13 23491443 23491574 -96792738 - MIRb SINE MIR -136 132 1 6 764 605 95 0 0 chr13 23492662 23492736 -96791576 - tRNA-Ala-GCY tRNA tRNA -2 74 1 6 764 619 55 0 0 chr13 23492941 23493014 -96791298 - tRNA-Val-GTY tRNA tRNA -3 73 1 6 764 438 259 90 69 chr13 23493159 23493462 -96790850 - L1MA8 LINE L1 -292 5999 5678 6 764 484 277 36 15 chr13 23493565 23493727 -96790585 + B3 SINE B2 5 173 -25 6 764 747 269 97 26 chr13 23494240 23494580 -96789732 + Lx7 LINE L1 835 1198 -6530 6 764 773 143 18 169 chr13 23494590 23494898 -96789414 + ORR1B2 LTR MaLR 1 359 -8 6 764 13823 220 94 60 chr13 23494905 23499119 -96785193 + Lx7 LINE L1 1211 5585 -295 6 764 865 197 0 20 chr13 23499119 23499269 -96785043 + B1_Mur3 SINE Alu 2 148 -1 6 764 13823 220 94 60 chr13 23499269 23499518 -96784794 + Lx7 LINE L1 5586 5825 -55 6 764 1557 263 31 25 chr13 23499523 23499999 -96784313 + Lx7 LINE L1 5963 6441 -1255 6 764 327 175 0 0 chr13 23500600 23500657 -96783655 + MT2B LTR ERVL 1 57 -476 1 764 333 0 0 0 chr13 23500657 23500694 -96783618 + (A)n Simple_repeat Simple_repeat 1 37 0 2 764 1081 238 24 73 chr13 23500813 23501153 -96783159 + MT2B LTR ERVL 279 601 0 1 764 886 127 97 0 chr13 23501281 23501418 -96782894 - RMER12B LTR ERVK 0 1404 1253 3 764 600 59 0 0 chr13 23501418 23501503 -96782809 + (CA)n Simple_repeat Simple_repeat 1 85 0 4 764 5828 147 53 35 chr13 23501503 23501803 -96782509 - RMER12B LTR ERVK -152 1252 901 3 764 848 144 76 23 chr13 23501803 23501974 -96782338 - B2_Mm2 SINE B2 -15 180 1 5 764 5828 149 48 38 chr13 23501974 23502844 -96781468 - RMER12B LTR ERVK -504 900 1 3 764 252 296 59 7 chr13 23502869 23503005 -96781307 - MIRc SINE MIR -125 143 1 6 764 522 137 0 0 chr13 23503945 23504018 -96780294 - tRNA-Val-GTG tRNA tRNA -3 73 1 7 764 556 110 0 0 chr13 23504809 23504882 -96779430 - tRNA-Ala-GCY tRNA tRNA -3 73 1 8 764 207 0 0 0 chr13 23505086 23505109 -96779203 + (A)n Simple_repeat Simple_repeat 1 23 0 9 764 616 41 0 0 chr13 23505116 23505189 -96779123 - tRNA-Val-GTY tRNA tRNA -3 73 1 1 764 791 265 105 51 chr13 23505387 23505939 -96778373 - L1MA8 LINE L1 -382 5909 5328 1 764 2071 144 91 0 chr13 23507217 23507592 -96776720 - MTC LTR MaLR -8 413 5 1 764 351 284 44 22 chr13 23508411 23508548 -96775764 - RSINE1 SINE B4 -21 144 5 1 764 670 74 0 0 chr13 23509189 23509457 -96774855 + L1_Mus1 LINE L1 6464 6567 0 1 764 639 216 0 48 chr13 23509472 23509618 -96774694 + B1_Mur3 SINE Alu 5 143 -6 1 764 189 0 0 0 chr13 23509619 23509640 -96774672 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 1 764 263 148 0 36 chr13 23509903 23509959 -96774353 + CT-rich Low_complexity Low_complexity 2 55 0 1 764 695 159 0 9 chr13 23509959 23510073 -96774239 - B1_Mur2 SINE Alu -22 127 15 1 764 1982 110 32 0 chr13 23510836 23511145 -96773167 - ORR1A2 LTR MaLR -8 319 1 1 764 21 36 0 0 chr13 23511305 23511333 -96772979 + AT_rich Low_complexity Low_complexity 1 28 0 2 764 251 290 17 167 chr13 23511342 23511516 -96772796 + B1F1 SINE Alu 1 148 -1 2 764 10431 89 35 13 chr13 23511537 23512965 -96771347 + MERVL-int LTR ERVL 2871 4329 -1156 2 764 1569 130 32 55 chr13 23512965 23513274 -96771038 + MT2C_Mm LTR ERVL 174 475 0 2 764 29 28 0 0 chr13 23513408 23513444 -96770868 + AT_rich Low_complexity Low_complexity 1 36 0 2 764 1062 73 15 0 chr13 23514807 23514943 -96769369 + B1_Mus2 SINE Alu 1 138 -9 2 764 243 0 0 0 chr13 23514943 23514970 -96769342 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 764 1331 87 60 0 chr13 23515028 23515211 -96769101 + B2_Mm2 SINE B2 2 195 0 2 764 219 226 19 0 chr13 23515803 23515856 -96768456 + (CGGGG)n Simple_repeat Simple_repeat 5 58 0 2 764 28 79 0 0 chr13 23516215 23516278 -96768034 + AT_rich Low_complexity Low_complexity 1 63 0 2 764 260 219 84 12 chr13 23517120 23517203 -96767109 + ID_B1 SINE B4 81 169 -55 3 764 268 202 100 12 chr13 23517132 23517212 -96767100 + PB1D10 SINE Alu 14 100 -17 3 764 33 25 0 0 chr13 23517212 23517252 -96767060 + AT_rich Low_complexity Low_complexity 1 40 0 3 764 513 27 0 180 chr13 23517514 23517603 -96766709 - tRNA-Tyr-TAC tRNA tRNA -3 73 1 3 764 519 27 0 171 chr13 23518373 23518461 -96765851 + tRNA-Tyr-TAC tRNA tRNA 1 73 -3 3 764 385 53 35 0 chr13 23518851 23518908 -96765404 - B1_Mus2 SINE Alu -88 59 1 3 764 335 162 100 0 chr13 23518908 23518921 -96765391 - B4 SINE B4 -135 123 70 3 764 531 28 0 151 chr13 23518963 23519049 -96765263 - tRNA-Tyr-TAC tRNA tRNA -3 73 1 3 764 1865 201 24 17 chr13 23519341 23519752 -96764560 - MTD LTR MaLR 0 419 6 3 764 480 55 0 180 chr13 23520606 23520695 -96763617 - tRNA-Tyr-TAC tRNA tRNA -3 73 1 3 764 248 305 0 0 chr13 23522227 23522286 -96762026 + ID_B1 SINE B4 128 186 -38 4 764 477 244 0 0 chr13 23522435 23522558 -96761754 + A-rich Low_complexity Low_complexity 1 123 0 4 764 233 57 29 0 chr13 23523153 23523188 -96761124 + (CCCCCA)n Simple_repeat Simple_repeat 6 41 0 4 764 631 41 0 0 chr13 23523280 23523353 -96760959 + tRNA-Ala-GCY tRNA tRNA 1 73 -3 4 764 216 135 0 0 chr13 23524089 23524126 -96760186 + (T)n Simple_repeat Simple_repeat 1 37 0 4 764 293 0 27 0 chr13 23524214 23524251 -96760061 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 4 764 519 27 0 171 chr13 23524858 23524946 -96759366 - tRNA-Tyr-TAC tRNA tRNA -3 73 1 4 764 390 290 64 8 chr13 23525278 23525403 -96758909 + B1_Mur1 SINE Alu 3 134 -15 4 764 258 32 0 0 chr13 23525405 23525436 -96758876 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 764 25 0 0 0 chr13 23525558 23525583 -96758729 + AT_rich Low_complexity Low_complexity 1 25 0 4 764 213 121 0 0 chr13 23526205 23526238 -96758074 + (TCC)n Simple_repeat Simple_repeat 2 34 0 5 764 270 0 0 0 chr13 23526834 23526864 -96757448 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 5 764 357 284 9 18 chr13 23527877 23527988 -96756324 + GA-rich Low_complexity Low_complexity 4 113 0 5 764 665 0 0 0 chr13 23528208 23528282 -96756030 + tRNA-Lys-AAG tRNA tRNA 1 74 -2 5 764 22 0 0 0 chr13 23528319 23528341 -96755971 + AT_rich Low_complexity Low_complexity 1 22 0 5 764 792 209 0 0 chr13 23528581 23528753 -96755559 + GA-rich Low_complexity Low_complexity 1 172 0 5 764 384 22 0 0 chr13 23528754 23528799 -96755513 + (GAAAA)n Simple_repeat Simple_repeat 1 45 0 5 764 643 0 0 0 chr13 23528862 23528934 -96755378 - tRNA-Pro-CCY tRNA tRNA -3 72 1 5 764 198 0 0 0 chr13 23529720 23529742 -96754570 + (TTTC)n Simple_repeat Simple_repeat 3 24 0 5 764 668 0 0 0 chr13 23529977 23530051 -96754261 - tRNA-Ile-ATT tRNA tRNA -3 74 1 5 764 609 42 0 0 chr13 23530565 23530637 -96753675 - tRNA-Ala-GCG tRNA tRNA -3 72 1 6 764 435 52 0 0 chr13 23531153 23531211 -96753101 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 764 569 331 78 23 chr13 23531406 23531712 -96752600 + LTR40b LTR ERVL 1 323 -139 6 764 241 185 55 18 chr13 23531829 23531884 -96752428 - PB1D10 SINE Alu -2 115 59 6 764 335 297 27 9 chr13 23531837 23531949 -96752363 - ID_B1 SINE B4 -9 215 102 6 764 704 114 8 26 chr13 23531960 23532077 -96752235 - B3 SINE B2 -77 139 25 6 764 297 0 0 0 chr13 23532324 23532357 -96751955 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 764 189 0 0 0 chr13 23532357 23532377 -96751935 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 764 207 0 0 0 chr13 23533314 23533337 -96750975 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 764 504 241 154 0 chr13 23534197 23534392 -96749920 + L1MA6 LINE L1 6071 6295 -5 6 764 343 261 147 19 chr13 23534827 23535038 -96749274 + L1M5 LINE L1 4466 4703 -1443 7 764 21 71 0 0 chr13 23535944 23535986 -96748326 + AT_rich Low_complexity Low_complexity 1 42 0 7 764 821 176 48 11 chr13 23535998 23536193 -96748119 + B2_Mm2 SINE B2 1 203 -13 7 764 295 220 45 113 chr13 23536139 23536272 -96748040 - RMER12 LTR ERVK -470 852 729 7 764 22 35 0 0 chr13 23536709 23536738 -96747574 + AT_rich Low_complexity Low_complexity 1 29 0 7 764 452 252 24 0 chr13 23536798 23536921 -96747391 + MTEa LTR MaLR 252 377 -2 7 764 323 252 10 29 chr13 23537397 23537499 -96746813 - PB1D7 SINE Alu -20 100 1 7 764 678 0 0 0 chr13 23538010 23538083 -96746229 - tRNA-Val-GTG tRNA tRNA -3 73 1 7 764 213 275 72 0 chr13 23538487 23538556 -96745756 + PB1D7 SINE Alu 39 112 -8 7 764 650 14 0 0 chr13 23538660 23538733 -96745579 - tRNA-Arg-CGY_ tRNA tRNA -3 73 1 7 764 255 31 0 0 chr13 23538902 23538934 -96745378 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 8 764 261 0 0 0 chr13 23540168 23540197 -96744115 + (TG)n Simple_repeat Simple_repeat 1 29 0 8 764 690 94 0 0 chr13 23540197 23540313 -96743999 + (GA)n Simple_repeat Simple_repeat 1 117 0 8 764 302 238 0 0 chr13 23540489 23540552 -96743760 - MLT2C1 LTR ERVL -325 72 10 8 764 524 225 25 0 chr13 23540812 23540932 -96743380 - ID_B1 SINE B4 -7 217 95 8 764 347 291 123 19 chr13 23541153 23541307 -96743005 + B3A SINE B2 1 170 -28 8 764 306 0 0 0 chr13 23541335 23541369 -96742943 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 764 679 0 0 0 chr13 23542490 23542564 -96741748 + tRNA-Thr-ACY_ tRNA tRNA 1 74 -3 8 764 212 0 36 0 chr13 23543596 23543624 -96740688 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 764 841 86 16 0 chr13 23543631 23543759 -96740553 - B1_Mus2 SINE Alu 0 147 18 8 764 252 276 49 39 chr13 23543769 23543871 -96740441 - RMER5 LTR ERV1 -358 176 74 9 764 1011 217 238 10 chr13 23544103 23544405 -96739907 + MTD LTR MaLR 44 414 -5 9 764 309 237 79 0 chr13 23544530 23544606 -96739706 - ID_B1 SINE B4 -57 167 86 9 764 241 196 22 0 chr13 23544775 23544821 -96739491 + MLT2B1 LTR ERVL 125 171 -385 9 764 482 303 32 0 chr13 23544894 23545049 -96739263 + MLT2B1 LTR ERVL 364 523 -44 9 764 583 96 0 0 chr13 23545300 23545383 -96738929 - tRNA-Leu-CTG tRNA tRNA -3 83 1 9 764 396 0 0 0 chr13 23545885 23545929 -96738383 + (TTG)n Simple_repeat Simple_repeat 1 44 0 9 764 949 23 5 68 chr13 23546177 23546367 -96737945 + (TTC)n Simple_repeat Simple_repeat 2 179 0 9 764 349 91 55 55 chr13 23546367 23546495 -96737817 + CT-rich Low_complexity Low_complexity 3 130 0 9 764 641 175 106 24 chr13 23546533 23546703 -96737609 + L1MA8 LINE L1 6086 6269 -22 9 764 25 31 0 0 chr13 23546792 23546824 -96737488 + AT_rich Low_complexity Low_complexity 1 32 0 9 764 212 121 0 0 chr13 23546903 23546936 -96737376 + MER5B DNA MER1_type 75 107 -71 1 764 213 39 0 0 chr13 23546960 23546986 -96737326 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1 764 215 173 18 71 chr13 23546986 23547033 -96737279 - B1_Mur3 SINE Alu -14 135 90 1 764 576 279 14 7 chr13 23547208 23547349 -96736963 - ID_B1 SINE B4 -3 221 80 1 764 332 271 17 86 chr13 23547592 23547709 -96736603 - PB1D10 SINE Alu -8 109 1 1 764 548 250 126 21 chr13 23547862 23548005 -96736307 - RSINE1 SINE B4 0 165 8 1 764 189 0 0 0 chr13 23548078 23548099 -96736213 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 764 538 286 8 8 chr13 23548100 23548234 -96736078 - B1F SINE Alu -11 138 5 1 764 477 255 10 0 chr13 23549234 23549336 -96734976 + PB1D10 SINE Alu 6 108 -9 1 764 351 0 0 0 chr13 23549336 23549375 -96734937 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 764 198 0 0 0 chr13 23549444 23549466 -96734846 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 764 688 283 202 14 chr13 23549608 23550028 -96734284 + Lx8 LINE L1 6968 7466 -7 1 764 216 0 0 0 chr13 23551709 23551733 -96732579 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 764 29 47 0 0 chr13 23551925 23551968 -96732344 + AT_rich Low_complexity Low_complexity 1 43 0 1 764 953 235 42 5 chr13 23554031 23554245 -96730067 - ID_B1 SINE B4 -2 222 1 1 764 408 254 61 9 chr13 23554398 23554513 -96729799 + ID_B1 SINE B4 66 186 -38 1 764 307 283 0 62 chr13 23554418 23554531 -96729781 + PB1D10 SINE Alu 11 116 -1 1 764 668 241 0 0 chr13 23554535 23554676 -96729636 + B1_Mur1 SINE Alu 9 149 0 1 764 189 0 0 0 chr13 23554676 23554697 -96729615 + (A)n Simple_repeat Simple_repeat 1 21 0 1 764 214 286 15 31 chr13 23554776 23554841 -96729471 + CT-rich Low_complexity Low_complexity 3 66 0 1 764 354 243 0 0 chr13 23555002 23555072 -96729240 - ID_B1 SINE B4 -52 172 103 1 764 288 183 32 0 chr13 23555113 23555206 -96729106 + (TA)n Simple_repeat Simple_repeat 1 96 0 1 764 295 208 0 0 chr13 23555403 23555475 -96728837 + tRNA-Glu-GAG_ tRNA tRNA 1 72 -3 1 764 390 228 158 0 chr13 23556558 23556672 -96727640 - ID_B1 SINE B4 -3 221 90 1 764 384 283 35 0 chr13 23556721 23556834 -96727478 - B1F2 SINE Alu -22 127 11 1 764 337 252 0 78 chr13 23558017 23558133 -96726179 + B1_Mur1 SINE Alu 22 128 -21 1 764 22 0 0 0 chr13 23558573 23558595 -96725717 + AT_rich Low_complexity Low_complexity 1 22 0 1 764 533 62 0 0 chr13 23558729 23558810 -96725502 + L1Md_F2 LINE L1 6501 6581 -1 1 764 374 244 13 0 chr13 23558822 23558900 -96725412 + ID_B1 SINE B4 19 97 -127 1 764 507 27 0 189 chr13 23558944 23559034 -96725278 + tRNA-Tyr-TAC tRNA tRNA 1 73 -3 1 764 578 256 51 0 chr13 23559145 23559282 -96725030 + B1_Mus2 SINE Alu 4 147 0 1 764 236 194 0 61 chr13 23559283 23559349 -96724963 + GA-rich Low_complexity Low_complexity 2 63 0 1 764 22 56 0 0 chr13 23559721 23559757 -96724555 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 511 169 323 6 chr13 23559762 23559923 -96724389 + B3 SINE B2 5 216 0 1 764 25 0 0 0 chr13 23559976 23560001 -96724311 + AT_rich Low_complexity Low_complexity 1 25 0 1 764 411 262 128 85 chr13 23560361 23560549 -96723763 + B3A SINE B2 2 197 -1 1 764 1054 49 0 0 chr13 23560558 23560700 -96723612 + B1_Mus1 SINE Alu 6 147 -1 1 764 241 241 8 188 chr13 23560866 23560999 -96723313 + B1F SINE Alu 39 147 -2 1 764 323 283 111 44 chr13 23561048 23561229 -96723083 - RMER30 DNA MER1_type 0 202 10 1 764 367 245 41 0 chr13 23561482 23561580 -96722732 - ID_B1 SINE B4 -20 204 103 1 764 270 185 120 80 chr13 23561492 23561592 -96722720 - B1F SINE Alu -33 116 13 1 764 23 0 0 0 chr13 23561609 23561632 -96722680 + AT_rich Low_complexity Low_complexity 1 23 0 1 764 578 228 78 8 chr13 23561633 23561761 -96722551 - B1F SINE Alu -1 148 12 1 764 296 0 51 0 chr13 23561878 23561917 -96722395 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 1 764 369 0 0 0 chr13 23561918 23561959 -96722353 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 764 345 280 34 0 chr13 23562744 23562862 -96721450 - LTR16E1 LTR ERVL -1 537 416 1 764 858 69 14 51 chr13 23562870 23563008 -96721304 + B1_Mus2 SINE Alu 14 146 -1 1 764 460 296 35 9 chr13 23564114 23564230 -96720082 - RSINE1 SINE B4 -30 135 17 1 764 197 132 0 26 chr13 23564412 23564451 -96719861 + CT-rich Low_complexity Low_complexity 3 40 0 1 764 189 121 0 0 chr13 23564839 23564872 -96719440 + (T)n Simple_repeat Simple_repeat 1 33 0 1 764 359 187 239 18 chr13 23565472 23565581 -96718731 - RMER6B LTR ERVK -327 134 2 1 764 293 114 214 0 chr13 23566172 23566242 -96718070 - RLTR11A2 LTR ERVK -1 526 442 1 764 2173 161 104 44 chr13 23567045 23567565 -96716747 + RLTR40 LTR ERVK 1 551 -266 1 764 267 114 0 0 chr13 23567565 23567609 -96716703 + (GGGAGA)n Simple_repeat Simple_repeat 5 48 0 1 764 238 196 0 0 chr13 23567612 23567658 -96716654 + RLTR40 LTR ERVK 548 593 -224 1 764 450 0 0 0 chr13 23567876 23567926 -96716386 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 764 22 56 0 0 chr13 23568173 23568209 -96716103 + AT_rich Low_complexity Low_complexity 1 36 0 1 764 991 219 40 70 chr13 23568238 23568514 -96715798 - MT2B LTR ERVL -54 547 277 1 764 378 0 0 0 chr13 23568514 23568556 -96715756 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 764 991 215 182 134 chr13 23568556 23568724 -96715588 - MT2B LTR ERVL -325 276 2 1 764 821 200 0 0 chr13 23568742 23568877 -96715435 - B1_Mus1 SINE Alu -11 137 3 1 764 21 36 0 0 chr13 23568933 23568961 -96715351 + AT_rich Low_complexity Low_complexity 1 28 0 1 764 541 164 31 101 chr13 23569068 23569197 -96715115 + PB1D9 SINE Alu 1 120 0 1 764 271 214 0 0 chr13 23569316 23569372 -96714940 + ID_B1 SINE B4 81 136 -88 1 764 239 235 271 0 chr13 23569317 23569402 -96714910 + PB1D10 SINE Alu 1 108 -9 1 764 192 97 0 0 chr13 23571552 23571583 -96712729 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1 764 864 69 0 0 chr13 23571830 23571946 -96712366 - B1_Mm SINE Alu -30 117 2 1 764 690 75 0 0 chr13 23572024 23572117 -96712195 + (GGAA)n Simple_repeat Simple_repeat 3 95 0 1 764 287 241 25 10 chr13 23572566 23572663 -96711649 + MTEb LTR MaLR 1 100 -279 1 764 409 271 114 41 chr13 23572675 23572798 -96711514 + RSINE1 SINE B4 13 144 -21 1 764 935 206 85 0 chr13 23572844 23573033 -96711279 + B3 SINE B2 1 205 -11 1 764 578 271 0 7 chr13 23573062 23573203 -96711109 - RSINE1 SINE B4 0 165 26 1 764 302 268 24 104 chr13 23573492 23573617 -96710695 - B1F SINE Alu -2 147 33 1 764 222 257 124 0 chr13 23574094 23574199 -96710113 + L2 LINE L2 2667 2784 -635 1 764 222 298 140 13 chr13 23574245 23574340 -96709972 + B1F2 SINE Alu 3 107 -13 1 764 260 212 14 96 chr13 23574904 23574977 -96709335 + 4.5SRNA scRNA scRNA 20 86 -8 1 764 609 195 16 25 chr13 23574914 23575035 -96709277 + B1_Mur2 SINE Alu 29 148 -1 1 764 394 256 0 0 chr13 23575053 23575135 -96709177 + ID4 SINE ID 2 83 0 1 764 525 239 17 0 chr13 23576142 23576259 -96708053 - PB1D9 SINE Alu -1 119 1 1 764 646 261 21 62 chr13 23576159 23576411 -96707901 - ID_B1 SINE B4 -3 221 41 1 764 225 0 0 0 chr13 23576716 23576741 -96707571 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 1 764 1215 110 22 6 chr13 23576741 23576924 -96707388 + B2_Mm2 SINE B2 2 187 -8 1 764 584 308 25 38 chr13 23576974 23577210 -96707102 + B4A SINE B4 59 291 -1 1 764 393 283 28 0 chr13 23577623 23577729 -96706583 + ID_B1 SINE B4 93 201 -23 1 764 714 236 97 143 chr13 23578510 23578935 -96705377 + MTD LTR MaLR 1 405 -14 1 764 299 307 8 58 chr13 23579033 23579154 -96705158 + B1F1 SINE Alu 3 117 0 1 764 296 169 15 15 chr13 23579237 23579303 -96705009 - ID4_ SINE ID -17 66 1 1 764 369 278 74 0 chr13 23579307 23579415 -96704897 - PB1D10 SINE Alu 0 117 2 1 764 270 116 0 0 chr13 23580123 23580166 -96704146 + (TCC)n Simple_repeat Simple_repeat 3 45 0 1 764 334 312 12 19 chr13 23580168 23580328 -96703984 + CT-rich Low_complexity Low_complexity 3 161 0 1 764 246 330 20 10 chr13 23580830 23580928 -96703384 + CT-rich Low_complexity Low_complexity 1 99 0 1 764 272 163 0 0 chr13 23581019 23581062 -96703250 - MurSatRep1 Unknown Unknown -1851 286 244 1 764 417 182 123 7 chr13 23581077 23581184 -96703128 - PB1D9 SINE Alu -6 114 1 1 764 260 186 68 0 chr13 23581249 23581308 -96703004 + B2_Mm2 SINE B2 2 64 -131 1 764 562 54 0 0 chr13 23581301 23581375 -96702937 + B1_Mur4 SINE Alu 69 142 -8 1 764 429 240 87 87 chr13 23581888 23582084 -96702228 - B3A SINE B2 -1 197 2 1 764 421 193 117 7 chr13 23582149 23582261 -96702051 + PB1D9 SINE Alu 1 119 -1 1 764 252 342 0 0 chr13 23582570 23582646 -96701666 + ID4_ SINE ID 8 83 0 1 764 391 231 183 0 chr13 23582660 23582764 -96701548 + RSINE1 SINE B4 4 126 -39 1 764 1083 250 89 35 chr13 23582885 23583200 -96701112 + MTE2b LTR MaLR 48 379 0 1 764 460 110 0 14 chr13 23583410 23583484 -96700828 - B1_Mur4 SINE Alu -60 90 18 1 764 563 25 49 0 chr13 23583652 23583733 -96700579 + L1Md_F3 LINE L1 6500 6584 0 1 764 509 131 0 21 chr13 23583746 23583840 -96700472 - MTC LTR MaLR 0 421 330 2 764 551 207 64 7 chr13 23583816 23583957 -96700355 - URR1A DNA MER1_type -76 150 2 2 764 227 262 176 12 chr13 23584573 23584658 -96699654 - MTE2a LTR MaLR -280 99 1 2 764 248 327 0 45 chr13 23584767 23584924 -96699388 + CT-rich Low_complexity Low_complexity 5 154 0 2 764 654 220 0 72 chr13 23585212 23585364 -96698948 - B1_Mur4 SINE Alu 0 150 10 2 764 589 215 216 18 chr13 23585483 23585701 -96698611 - MER34 LTR ERV1 -226 316 56 2 764 1382 210 13 40 chr13 23585968 23586266 -96698046 + B4 SINE B4 3 292 0 2 764 635 103 25 37 chr13 23586268 23586429 -96697883 + (CA)n Simple_repeat Simple_repeat 2 160 0 2 764 443 218 16 98 chr13 23586689 23586811 -96697501 + PB1D7 SINE Alu 9 120 0 2 764 459 296 161 0 chr13 23587016 23587178 -96697134 + LTR33A LTR ERVL 27 214 -306 2 764 1098 246 112 41 chr13 23587989 23588328 -96695984 - ORR1D2 LTR MaLR -2 368 6 2 764 250 320 27 0 chr13 23588388 23588463 -96695849 + MER63A DNA AcHobo 4 80 -130 2 764 1152 267 105 16 chr13 23588657 23589038 -96695274 - MTD LTR MaLR 0 419 5 2 764 339 255 85 0 chr13 23589110 23589216 -96695096 + MER63A DNA AcHobo 91 205 -5 2 764 229 160 60 0 chr13 23589485 23589535 -96694777 + CT-rich Low_complexity Low_complexity 4 56 0 2 764 662 0 0 0 chr13 23589974 23590046 -96694266 + tRNA-Trp-TGG tRNA tRNA 1 72 -3 2 764 246 62 0 0 chr13 23590830 23590862 -96693450 + (TGG)n Simple_repeat Simple_repeat 2 33 0 2 764 632 97 138 46 chr13 23591282 23591298 -96693014 - B1_Mus2 SINE Alu -1 146 135 2 764 249 33 0 0 chr13 23591298 23591328 -96692984 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2 764 632 97 138 46 chr13 23591328 23591441 -96692871 - B1_Mus2 SINE Alu -13 134 5 2 764 723 233 83 54 chr13 23591480 23591684 -96692628 - B3 SINE B2 -6 210 1 2 764 558 75 0 0 chr13 23591802 23591882 -96692430 + (CCAA)n Simple_repeat Simple_repeat 4 83 0 2 764 651 0 0 0 chr13 23591948 23592020 -96692292 + tRNA-Met-i tRNA tRNA 1 72 -3 2 764 650 14 0 0 chr13 23592390 23592463 -96691849 - tRNA-Arg-CGY_ tRNA tRNA -3 73 1 2 764 751 0 0 0 chr13 23592825 23592907 -96691405 - tRNA-Ser-TCY tRNA tRNA -3 82 1 2 765 399 284 96 7 chr13 23593711 23593846 -96690466 + B1F1 SINE Alu 3 149 0 2 765 825 48 24 24 chr13 23594681 23594808 -96689504 + (TTTCC)n Simple_repeat Simple_repeat 5 131 0 2 765 420 71 0 0 chr13 23594808 23594864 -96689448 + (TCCC)n Simple_repeat Simple_repeat 4 59 0 2 765 228 67 0 0 chr13 23594881 23594911 -96689401 + (A)n Simple_repeat Simple_repeat 1 30 0 2 765 388 186 56 47 chr13 23594916 23595023 -96689289 - PB1D7 SINE Alu -11 109 2 2 765 837 72 36 7 chr13 23595253 23595392 -96688920 - Lx LINE L1 0 6654 6512 2 765 290 327 43 17 chr13 23595495 23595610 -96688702 - B1F2 SINE Alu -9 140 23 2 765 671 0 0 0 chr13 23595849 23595921 -96688391 - tRNA-Arg-CGA tRNA tRNA -4 72 1 2 765 247 273 239 23 chr13 23596508 23596684 -96687628 + MLT1B LTR MaLR 53 266 -124 2 765 189 0 0 0 chr13 23596684 23596705 -96687607 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 765 188 156 43 32 chr13 23596705 23596798 -96687514 + (TA)n Simple_repeat Simple_repeat 2 95 0 2 765 272 301 0 0 chr13 23596956 23597029 -96687283 - B1F SINE Alu -15 134 62 2 765 414 331 0 7 chr13 23597336 23597473 -96686839 + ID_B1 SINE B4 89 224 0 2 765 662 0 0 0 chr13 23598387 23598459 -96685853 + tRNA-Trp-TGG tRNA tRNA 1 72 -3 2 765 1270 187 182 110 chr13 23598806 23598950 -96685362 + MTC LTR MaLR 1 111 -310 2 765 1118 82 7 0 chr13 23598950 23599097 -96685215 - B1_Mus1 SINE Alu 0 148 1 2 765 1270 187 182 110 chr13 23599097 23599343 -96684969 + MTC LTR MaLR 112 419 -2 2 765 230 302 136 81 chr13 23599667 23599817 -96684495 - RLTR24 LTR ERV1 0 529 360 2 765 237 65 0 0 chr13 23599817 23599848 -96684464 + (TAA)n Simple_repeat Simple_repeat 3 33 0 2 765 230 302 136 81 chr13 23599848 23599895 -96684417 - RLTR24 LTR ERV1 -170 359 321 2 765 234 261 29 0 chr13 23600049 23600118 -96684194 - RLTR24 LTR ERV1 -454 75 5 2 765 229 224 237 0 chr13 23600473 23600549 -96683763 - PB1D10 SINE Alu -9 108 15 2 765 2108 160 33 21 chr13 23600893 23601322 -96682990 - RMER10A LTR ERVL -7 435 2 2 765 644 112 25 50 chr13 23601438 23601598 -96682714 + T-rich Low_complexity Low_complexity 5 160 0 2 765 456 67 0 0 chr13 23601611 23601671 -96682641 + (TC)n Simple_repeat Simple_repeat 2 61 0 2 765 745 140 6 117 chr13 23601680 23601842 -96682470 - B1_Mur4 SINE Alu -6 144 1 2 765 1877 303 152 44 chr13 23601901 23603014 -96681298 - Lx8 LINE L1 -17 7456 6224 2 765 333 0 0 0 chr13 23603036 23603073 -96681239 + (TTTC)n Simple_repeat Simple_repeat 1 37 0 2 765 1083 134 0 0 chr13 23603075 23603254 -96681058 + (TC)n Simple_repeat Simple_repeat 2 180 0 2 765 540 136 0 0 chr13 23603256 23603344 -96680968 + (TTCC)n Simple_repeat Simple_repeat 2 89 0 2 765 358 198 68 23 chr13 23603394 23603482 -96680830 - RSINE1 SINE B4 -33 132 41 2 765 299 214 86 48 chr13 23603455 23603565 -96680747 - B1_Mur1 SINE Alu -11 138 5 2 765 522 91 0 0 chr13 23603676 23603753 -96680559 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 765 827 223 9 14 chr13 23603779 23603997 -96680315 + RLTR15 LTR ERVK 4 220 -139 2 765 437 191 27 54 chr13 23604017 23604128 -96680184 + B1_Mus2 SINE Alu 38 145 -2 2 765 652 195 131 98 chr13 23604484 23604728 -96679584 - RMER4B LTR ERVK -330 255 4 2 765 281 24 0 47 chr13 23605138 23605181 -96679131 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 2 765 396 271 0 69 chr13 23605306 23605437 -96678875 + B3A SINE B2 1 122 -76 2 765 2856 179 152 14 chr13 23605461 23606169 -96678143 + RLTR25B LTR ERVK 1 806 -222 2 765 441 0 0 0 chr13 23606169 23606218 -96678094 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 765 222 37 0 0 chr13 23606218 23606244 -96678068 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 765 2287 145 175 4 chr13 23606244 23606382 -96677930 + RLTR25B LTR ERVK 884 1092 -11 2 765 332 275 100 64 chr13 23606592 23606732 -96677580 - MER31B LTR ERV1 -319 147 3 2 765 25 0 0 0 chr13 23606959 23606984 -96677328 + AT_rich Low_complexity Low_complexity 1 25 0 2 765 596 235 106 0 chr13 23606987 23607119 -96677193 - B1_Mus1 SINE Alu 0 148 3 2 765 636 84 11 0 chr13 23607308 23607403 -96676909 - B1_Mus1 SINE Alu -51 97 2 2 765 478 244 35 0 chr13 23607584 23607699 -96676613 + PB1D9 SINE Alu 1 119 -1 2 765 196 130 18 36 chr13 23607699 23607755 -96676557 + (CAAA)n Simple_repeat Simple_repeat 1 55 0 2 765 254 302 81 32 chr13 23607791 23607914 -96676398 - ID_B1 SINE B4 -9 215 87 2 765 261 229 177 0 chr13 23608180 23608276 -96676036 + MLT1F1 LTR MaLR 380 492 -77 2 765 296 237 17 260 chr13 23608318 23608495 -96675817 - B1_Mur1 SINE Alu -13 136 3 2 765 38 51 0 0 chr13 23608509 23608568 -96675744 + AT_rich Low_complexity Low_complexity 1 59 0 2 765 633 14 0 0 chr13 23609071 23609143 -96675169 + tRNA-Gly-GGY tRNA tRNA 1 72 -2 2 765 238 68 22 43 chr13 23609178 23609224 -96675088 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 2 765 651 0 0 0 chr13 23609560 23609632 -96674680 + tRNA-Met-i tRNA tRNA 1 72 -3 2 765 751 0 0 0 chr13 23610014 23610096 -96674216 + tRNA-Ser-TCA_ tRNA tRNA 1 82 -3 2 765 632 41 0 0 chr13 23610918 23610991 -96673321 + tRNA-Gln-CAA tRNA tRNA 1 73 -2 2 765 627 54 0 0 chr13 23611481 23611555 -96672757 + tRNA-Gln-CAA tRNA tRNA 1 74 -1 2 765 566 291 60 10 chr13 23612861 23613062 -96671250 + MER90a LTR ERV1 392 602 -12 2 765 729 12 0 0 chr13 23613738 23613820 -96670492 + tRNA-Ser-AGY tRNA tRNA 1 82 -3 2 765 234 0 0 0 chr13 23614483 23614509 -96669803 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 765 530 273 0 8 chr13 23614674 23614796 -96669516 + ID_B1 SINE B4 81 201 -23 2 765 236 93 0 44 chr13 23614797 23614842 -96669470 + (GGGA)n Simple_repeat Simple_repeat 3 45 0 2 765 445 195 0 0 chr13 23615175 23615262 -96669050 - PB1D7 SINE Alu -33 87 1 2 765 420 20 0 0 chr13 23615769 23615818 -96668494 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 765 216 0 0 0 chr13 23615818 23615841 -96668471 + (TA)n Simple_repeat Simple_repeat 1 24 0 2 765 276 273 22 11 chr13 23616788 23616877 -96667435 - L1MD LINE L1 -2294 5701 5612 2 765 825 11 0 0 chr13 23617246 23617340 -96666972 + (TCTCC)n Simple_repeat Simple_repeat 4 97 0 2 765 270 256 13 13 chr13 23617352 23617431 -96666881 + CT-rich Low_complexity Low_complexity 2 80 0 2 765 1201 132 101 10 chr13 23617966 23618173 -96666139 + URR1A DNA MER1_type 1 226 0 2 765 674 14 0 0 chr13 23618323 23618397 -96665915 - tRNA-Arg-CGA tRNA tRNA -2 74 1 2 765 2254 142 24 13 chr13 23619181 23619559 -96664753 + RLTR14 LTR ERV1 1 382 0 2 765 188 35 35 0 chr13 23619705 23619734 -96664578 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2 765 337 247 112 0 chr13 23619751 23619929 -96664383 + Lx9 LINE L1 7446 7643 -1 2 765 21 57 0 0 chr13 23621335 23621370 -96662942 + AT_rich Low_complexity Low_complexity 1 35 0 2 765 216 0 0 0 chr13 23621380 23621404 -96662908 + (A)n Simple_repeat Simple_repeat 1 24 0 2 765 659 14 0 0 chr13 23622214 23622288 -96662024 - tRNA-Met-i tRNA tRNA -1 74 1 2 765 218 328 99 41 chr13 23624161 23624282 -96660030 - RSINE1 SINE B4 -31 134 7 2 765 721 162 35 0 chr13 23624325 23624467 -96659845 - B1_Mur4 SINE Alu 0 150 4 2 765 694 249 67 11 chr13 23624627 23624806 -96659506 - B3 SINE B2 -11 205 17 2 765 224 288 165 22 chr13 23624829 23625053 -96659259 - L2 LINE L2 -535 2884 2629 2 765 321 230 220 0 chr13 23625133 23625233 -96659079 + B3A SINE B2 1 122 -76 3 765 243 0 0 0 chr13 23626186 23626213 -96658099 + (T)n Simple_repeat Simple_repeat 1 27 0 3 765 782 217 46 16 chr13 23626632 23626852 -96657460 + RMER10B LTR ERVL 2 398 0 3 765 21 0 0 0 chr13 23627999 23628020 -96656292 + AT_rich Low_complexity Low_complexity 1 21 0 3 765 269 309 21 0 chr13 23628207 23628304 -96656008 - B1_Mm SINE Alu -30 117 19 3 765 226 226 0 0 chr13 23628863 23628916 -96655396 + (TATG)n Simple_repeat Simple_repeat 3 55 0 3 765 270 0 0 0 chr13 23628922 23628952 -96655360 + (CCTA)n Simple_repeat Simple_repeat 1 30 0 3 765 274 278 0 40 chr13 23628984 23629059 -96655253 - B1_Mus1 SINE Alu -63 85 14 3 765 252 77 0 0 chr13 23629421 23629460 -96654852 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 765 1339 274 83 52 chr13 23630292 23630505 -96653807 - RMER17C-int LTR ERVK -22 3216 2978 3 765 3622 62 15 25 chr13 23630505 23630985 -96653327 - MT2C_Mm LTR ERVL 0 475 1 3 765 1339 257 107 59 chr13 23630985 23631490 -96652822 - RMER17C-int LTR ERVK -261 2977 2622 3 765 496 220 0 20 chr13 23631500 23631602 -96652710 + LSU-rRNA_Hsa rRNA rRNA 4199 4298 -737 3 765 680 171 53 89 chr13 23631622 23631824 -96652488 - RMER17C-int LTR ERVK -2454 3683 3535 3 765 1621 47 0 0 chr13 23631919 23632110 -96652202 + B2_Mm1t SINE B2 2 192 -1 3 765 1593 249 83 81 chr13 23632523 23633396 -96650916 - MYSERV6-int LTR ERVK -288 8671 8047 3 765 1132 82 0 0 chr13 23633412 23633559 -96650753 - B1_Mm SINE Alu 0 147 1 3 765 180 0 0 0 chr13 23633560 23633580 -96650732 + (T)n Simple_repeat Simple_repeat 1 20 0 3 765 343 258 56 0 chr13 23633749 23633838 -96650474 - MYSERV6-int LTR ERVK -3740 1782 1689 3 765 3277 48 8 0 chr13 23634124 23634517 -96649795 - MTA_Mm LTR MaLR 0 396 1 3 765 240 270 119 83 chr13 23637370 23637479 -96646833 + PB1D10 SINE Alu 5 117 0 3 765 189 0 0 0 chr13 23638010 23638031 -96646281 + (T)n Simple_repeat Simple_repeat 1 21 0 3 765 695 108 0 9 chr13 23639148 23639260 -96645052 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 3 765 763 83 208 0 chr13 23639262 23639382 -96644930 - B1_Mus1 SINE Alu -1 147 3 3 765 553 217 26 71 chr13 23639495 23639649 -96644663 + B1_Mur3 SINE Alu 2 148 -1 3 765 309 274 200 21 chr13 23639815 23640005 -96644307 + ID_B1 SINE B4 1 224 0 3 765 351 0 0 0 chr13 23640158 23640197 -96644115 + (TTA)n Simple_repeat Simple_repeat 1 39 0 3 765 1011 80 0 0 chr13 23640555 23640693 -96643619 + (GA)n Simple_repeat Simple_repeat 1 138 0 3 765 22 0 0 0 chr13 23641241 23641263 -96643049 + AT_rich Low_complexity Low_complexity 1 22 0 3 765 414 0 0 0 chr13 23641274 23641320 -96642992 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 3 765 22 0 0 0 chr13 23641728 23641750 -96642562 + AT_rich Low_complexity Low_complexity 1 22 0 3 765 565 50 0 0 chr13 23644040 23644120 -96640192 - B1_Mus2 SINE Alu 0 147 68 3 765 217 48 23 45 chr13 23644332 23644376 -96639936 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 765 637 212 51 36 chr13 23645160 23645297 -96639015 - B1_Mur3 SINE Alu -8 141 3 3 765 243 0 0 0 chr13 23648618 23648645 -96635667 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 765 29 47 0 0 chr13 23648645 23648688 -96635624 + AT_rich Low_complexity Low_complexity 1 43 0 3 765 24 0 0 0 chr13 23648771 23648795 -96635517 + AT_rich Low_complexity Low_complexity 1 24 0 3 765 224 214 0 0 chr13 23648801 23648843 -96635469 - RSINE1 SINE B4 -29 136 95 3 765 350 278 37 0 chr13 23648927 23649035 -96635277 + RSINE1 SINE B4 21 132 -33 3 765 28 0 0 0 chr13 23649900 23649928 -96634384 + AT_rich Low_complexity Low_complexity 1 28 0 3 765 1116 88 0 26 chr13 23649928 23650080 -96634232 - B1_Mus1 SINE Alu 0 148 1 3 765 219 150 0 0 chr13 23650719 23650775 -96633537 + (A)n Simple_repeat Simple_repeat 1 56 0 3 765 420 254 16 39 chr13 23651261 23651388 -96632924 - B1_Mur1 SINE Alu -5 144 21 3 765 471 287 0 23 chr13 23651399 23651531 -96632781 - ID_B1 SINE B4 -8 216 88 3 765 1064 148 17 6 chr13 23651826 23652002 -96632310 - B2_Mm2 SINE B2 -14 181 4 3 765 240 270 119 83 chr13 23653104 23653213 -96631099 - PB1D10 SINE Alu 0 117 5 3 765 243 125 0 0 chr13 23654598 23654638 -96629674 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 765 558 86 0 0 chr13 23654638 23654718 -96629594 + (CA)n Simple_repeat Simple_repeat 2 82 0 3 765 309 251 234 35 chr13 23655810 23655996 -96628316 - B3 SINE B2 -14 202 2 3 765 590 301 76 5 chr13 23656343 23656540 -96627772 - B3 SINE B2 -5 211 1 3 765 198 0 0 0 chr13 23656555 23656577 -96627735 + (T)n Simple_repeat Simple_repeat 1 22 0 3 765 2680 152 102 48 chr13 23657058 23657166 -96627146 + RMER19C LTR ERVK 1 127 -484 3 765 1921 131 38 13 chr13 23657166 23657484 -96626828 - ORR1A2 LTR MaLR 0 327 2 3 765 2680 152 102 48 chr13 23657484 23657955 -96626357 + RMER19C LTR ERVK 128 611 0 3 765 387 41 0 0 chr13 23657999 23658048 -96626264 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 765 460 333 65 0 chr13 23658051 23658189 -96626123 - B3A SINE B2 -48 150 4 3 765 215 349 0 12 chr13 23659009 23659093 -96625219 + RSINE1 SINE B4 47 129 -36 3 765 239 389 19 0 chr13 23661426 23661534 -96622778 + B1F SINE Alu 1 110 -39 3 765 369 329 27 27 chr13 23661570 23661720 -96622592 + B3A SINE B2 3 152 -46 3 765 577 220 49 7 chr13 23662028 23662170 -96622142 + B1_Mur2 SINE Alu 2 149 0 3 765 3865 54 57 8 chr13 23664987 23665475 -96618837 + LTRIS3 LTR ERV1 1 512 0 3 765 200 118 29 0 chr13 23668881 23668915 -96615397 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 3 765 278 289 98 98 chr13 23668923 23669096 -96615216 + B3A SINE B2 26 198 0 3 765 722 290 67 27 chr13 23669216 23669567 -96614745 + MTD LTR MaLR 1 384 -35 3 765 206 191 24 0 chr13 23669654 23669696 -96614616 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 765 798 169 27 27 chr13 23669739 23669885 -96614427 - B1_Mur3 SINE Alu -1 148 3 3 765 198 103 0 0 chr13 23670174 23670203 -96614109 + (T)n Simple_repeat Simple_repeat 1 29 0 3 765 204 40 0 0 chr13 23670229 23670254 -96614058 + (TTCC)n Simple_repeat Simple_repeat 3 27 0 3 765 609 83 0 0 chr13 23670254 23670338 -96613974 + (TCTCC)n Simple_repeat Simple_repeat 2 85 0 3 765 221 182 0 68 chr13 23670342 23670365 -96613947 + polypyrimidine Low_complexity Low_complexity 34 56 0 3 765 951 127 0 0 chr13 23670365 23670515 -96613797 + (TTTC)n Simple_repeat Simple_repeat 1 150 0 3 765 531 45 0 0 chr13 23670522 23670588 -96613724 + (TCTCC)n Simple_repeat Simple_repeat 2 67 0 3 765 221 182 0 68 chr13 23670588 23670615 -96613697 + polypyrimidine Low_complexity Low_complexity 2 26 0 3 765 755 188 12 0 chr13 23670615 23670775 -96613537 + CT-rich Low_complexity Low_complexity 1 162 0 3 765 523 293 66 39 chr13 23672093 23672274 -96612038 - ID_B1 SINE B4 -15 209 24 3 765 272 284 55 53 chr13 23672517 23672768 -96611544 - Charlie4a DNA MER1_type -183 325 28 3 765 854 121 28 0 chr13 23672994 23673135 -96611177 - URR1A DNA MER1_type 0 226 82 3 765 532 173 132 9 chr13 23674176 23674307 -96610005 - B1_Mur3 SINE Alu 0 147 1 3 765 184 279 82 0 chr13 23674424 23674485 -96609827 + MER5A DNA MER1_type 1 66 -123 3 765 22 0 0 0 chr13 23674601 23674623 -96609689 + AT_rich Low_complexity Low_complexity 1 22 0 3 765 2306 137 45 57 chr13 23674668 23675071 -96609241 + RMER10B LTR ERVL 1 398 0 3 765 878 93 139 0 chr13 23675315 23675444 -96608868 - B1_Mus1 SINE Alu 0 148 2 3 765 210 259 210 0 chr13 23675645 23675726 -96608586 + B1_Mus2 SINE Alu 4 101 -46 3 765 354 289 138 16 chr13 23675791 23675914 -96608398 + B1F1 SINE Alu 9 146 -3 3 765 223 273 38 25 chr13 23676100 23676179 -96608133 - B4A SINE B4 -203 89 10 3 765 216 158 0 0 chr13 23678841 23678879 -96605433 + CT-rich Low_complexity Low_complexity 3 40 0 3 765 342 349 28 0 chr13 23679159 23679265 -96605047 - B1F SINE Alu -34 115 7 3 765 79 55 0 0 chr13 23679283 23679411 -96604901 + AT_rich Low_complexity Low_complexity 1 128 0 3 765 1199 82 0 7 chr13 23679478 23679626 -96604686 + B1_Mm SINE Alu 1 147 0 3 765 199 54 26 26 chr13 23679628 23679666 -96604646 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 3 765 475 246 47 71 chr13 23679775 23679902 -96604410 - ID_B1 SINE B4 -2 222 99 3 765 261 254 0 0 chr13 23680006 23680069 -96604243 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 765 390 330 36 72 chr13 23680069 23680264 -96604048 - B4A SINE B4 -101 191 8 3 765 242 320 13 0 chr13 23680862 23680937 -96603375 + PB1 SINE Alu 44 119 -8 3 765 211 271 0 0 chr13 23680939 23680987 -96603325 + GA-rich Low_complexity Low_complexity 3 50 0 3 765 262 376 36 18 chr13 23681247 23681358 -96602954 - PB1 SINE Alu -8 119 7 3 765 180 0 0 0 chr13 23681667 23681687 -96602625 + (CCAA)n Simple_repeat Simple_repeat 4 23 0 3 765 1191 81 0 0 chr13 23681960 23682108 -96602204 - B1_Mus1 SINE Alu 0 148 1 3 765 621 273 96 18 chr13 23682681 23682953 -96601359 + Charlie5 DNA MER1_type 2252 2544 -80 3 765 806 220 12 18 chr13 23683797 23683964 -96600348 + RLTR1D LTR ERV1 81 246 -359 3 765 1780 215 42 49 chr13 23683964 23684390 -96599922 + RLTR1D LTR ERV1 183 605 0 3 765 321 82 0 0 chr13 23684411 23684460 -96599852 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 765 351 0 0 0 chr13 23684460 23684499 -96599813 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 765 332 179 115 54 chr13 23685629 23685759 -96598553 + IAPEz-int LTR ERVK 3553 3690 -2791 3 765 1568 181 174 24 chr13 23685894 23686274 -96598038 + RMER15 LTR ERVL 2 438 -137 4 765 1141 317 58 35 chr13 23686444 23687066 -96597246 - RLTR42-int LTR ERVK -4787 735 100 4 765 505 297 118 35 chr13 23688247 23688561 -96595751 - MER92B LTR ERV1 -160 476 137 4 765 267 31 0 0 chr13 23688620 23688652 -96595660 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 765 403 237 51 34 chr13 23688995 23689113 -96595199 + B1F2 SINE Alu 1 120 -29 4 765 468 238 19 9 chr13 23689012 23689118 -96595194 + ID_B1 SINE B4 97 203 -21 4 765 206 32 32 0 chr13 23689865 23689896 -96594416 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 4 765 186 103 0 0 chr13 23690668 23690697 -96593615 + (GGA)n Simple_repeat Simple_repeat 3 31 0 4 765 2358 86 13 0 chr13 23691125 23691440 -96592872 + ORR1A2 LTR MaLR 1 319 -8 4 765 24 32 0 0 chr13 23691642 23691673 -96592639 + AT_rich Low_complexity Low_complexity 1 31 0 4 765 2621 51 95 0 chr13 23691678 23691994 -96592318 - ORR1A1 LTR MaLR 0 346 1 4 765 14410 58 20 12 chr13 23691994 23693773 -96590539 - ORR1A1-int LTR MaLR 0 1792 1 4 765 2449 44 66 0 chr13 23693777 23694094 -96590218 - ORR1A1 LTR MaLR -8 338 1 4 765 374 288 0 0 chr13 23694097 23694170 -96590142 - ID4 SINE ID -10 73 1 4 765 328 294 67 2 chr13 23694176 23694313 -96589999 - B1F SINE Alu 0 149 6 4 765 21 0 0 0 chr13 23694322 23694343 -96589969 + AT_rich Low_complexity Low_complexity 1 21 0 4 765 303 71 0 0 chr13 23694414 23694456 -96589856 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 765 262 287 101 22 chr13 23694505 23694594 -96589718 + B4A SINE B4 79 174 -118 4 765 471 261 0 18 chr13 23694518 23694631 -96589681 + PB1D10 SINE Alu 7 117 0 4 765 21 0 0 0 chr13 23694679 23694700 -96589612 + AT_rich Low_complexity Low_complexity 1 21 0 4 765 394 211 19 0 chr13 23695887 23695991 -96588321 + GA-rich Low_complexity Low_complexity 3 108 0 4 765 309 298 57 137 chr13 23696009 23696184 -96588128 + B3 SINE B2 17 177 -39 4 765 648 87 0 0 chr13 23696212 23696304 -96588008 + (GGA)n Simple_repeat Simple_repeat 3 94 0 4 765 369 358 0 0 chr13 23697306 23697440 -96586872 - RSINE1 SINE B4 -29 136 3 4 765 366 271 134 55 chr13 23697655 23697817 -96586495 - ORSL DNA Tip100 0 275 107 4 765 814 319 0 0 chr13 23697817 23698027 -96586285 - B3 SINE B2 -4 212 3 4 765 366 271 134 55 chr13 23698027 23698118 -96586194 - ORSL DNA Tip100 -169 106 2 4 765 333 146 0 0 chr13 23699209 23699257 -96585055 - HAL1-3A_ME LINE L1 -835 2023 1976 4 765 1535 201 86 116 chr13 23699258 23699440 -96584872 + MTD LTR MaLR 1 195 -224 4 765 185 0 40 0 chr13 23699440 23699465 -96584847 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 765 1535 201 86 116 chr13 23699465 23699714 -96584598 + MTD LTR MaLR 196 419 0 4 765 588 192 32 8 chr13 23699749 23699875 -96584437 + MTD-int LTR MaLR 1 129 -1129 4 765 1286 239 131 64 chr13 23699911 23700534 -96583778 + MTD-int LTR MaLR 356 1105 -153 4 765 1245 74 0 0 chr13 23700540 23700688 -96583624 + B1_Mus1 SINE Alu 1 148 0 4 765 21 82 0 0 chr13 23700688 23700737 -96583575 + AT_rich Low_complexity Low_complexity 1 49 0 4 765 429 243 6 158 chr13 23700756 23700927 -96583385 - B1_Mm SINE Alu 0 147 3 4 765 674 312 68 24 chr13 23701172 23701467 -96582845 + MT2A LTR ERVL 128 435 -98 4 765 2520 159 95 8 chr13 23701663 23702157 -96582155 - RMER15 LTR ERVL -8 567 31 4 765 1246 88 28 0 chr13 23702175 23702357 -96581955 - B2_Mm2 SINE B2 0 195 9 4 765 538 162 0 0 chr13 23702375 23702449 -96581863 - tRNA-Ile-ATT tRNA tRNA -3 74 1 4 765 210 37 0 0 chr13 23702598 23702625 -96581687 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 4 765 22 0 0 0 chr13 23702642 23702664 -96581648 + AT_rich Low_complexity Low_complexity 1 22 0 4 765 1290 68 0 0 chr13 23702671 23703334 -96580978 + (TG)n Simple_repeat Simple_repeat 1 663 0 4 765 360 254 310 178 chr13 23703344 23703560 -96580752 - B4 SINE B4 -30 262 19 4 765 365 342 88 31 chr13 23704379 23704572 -96579740 - B4 SINE B4 -86 206 3 4 765 269 195 38 0 chr13 23704758 23704823 -96579489 - B1F2 SINE Alu -80 67 1 4 765 217 241 36 36 chr13 23704777 23704833 -96579479 - B4A SINE B4 -159 133 78 4 765 275 345 46 80 chr13 23705905 23705929 -96578383 - B1_Mus2 SINE Alu -1 146 1 4 765 428 342 0 55 chr13 23705929 23706056 -96578256 - ID_B1 SINE B4 -23 201 82 4 765 480 269 8 48 chr13 23706083 23706208 -96578104 - B1F2 SINE Alu -7 142 23 4 765 721 264 126 6 chr13 23706761 23707003 -96577309 - ORR1D1 LTR MaLR -79 280 1 4 765 1435 64 6 0 chr13 23707889 23707902 -96576410 - B2_Mm1a SINE B2 -19 174 162 4 765 486 0 0 0 chr13 23707902 23707956 -96576356 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 4 765 1435 64 6 0 chr13 23707956 23708114 -96576198 - B2_Mm1a SINE B2 -32 161 3 4 765 1249 96 61 11 chr13 23708116 23708296 -96576016 - B2_Mm1t SINE B2 -4 189 1 4 765 404 173 0 13 chr13 23708613 23708689 -96575623 - B1_Mur2 SINE Alu -34 115 41 4 765 1108 133 27 37 chr13 23708718 23708748 -96575564 - B2_Mm2 SINE B2 -9 186 162 4 765 369 0 0 0 chr13 23708748 23708789 -96575523 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 4 765 1108 133 27 37 chr13 23708789 23708945 -96575367 - B2_Mm2 SINE B2 -34 161 2 4 765 415 346 9 0 chr13 23709206 23709313 -96574999 - ID_B1 SINE B4 -112 112 5 4 765 195 42 0 0 chr13 23709397 23709421 -96574891 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 4 765 329 234 52 0 chr13 23709421 23709498 -96574814 - PB1D9 SINE Alu 0 120 40 4 765 275 337 35 0 chr13 23709532 23709618 -96574694 - PB1D7 SINE Alu -5 115 27 4 765 910 162 0 11 chr13 23709851 23710032 -96574280 + CT-rich Low_complexity Low_complexity 2 180 0 4 765 578 185 81 32 chr13 23710542 23710665 -96573647 - B1_Mur1 SINE Alu -20 129 1 4 765 331 202 80 45 chr13 23710687 23710775 -96573537 - B3 SINE B2 -1 215 125 4 765 279 0 0 0 chr13 23712450 23712481 -96571831 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 765 249 275 11 0 chr13 23715771 23715862 -96568450 + (TTATA)n Simple_repeat Simple_repeat 1 92 0 4 765 1131 275 117 12 chr13 23716745 23717087 -96567225 - MTD LTR MaLR 0 419 42 4 765 233 275 98 11 chr13 23717461 23717553 -96566759 - PB1D7 SINE Alu -49 100 1 4 765 737 311 40 5 chr13 23717851 23718257 -96566055 + L1MD3 LINE L1 5648 6067 -1815 4 765 249 311 53 35 chr13 23718438 23718608 -96565704 + L1MD3 LINE L1 6314 6486 -1396 4 765 397 289 101 73 chr13 23718689 23718976 -96565336 + L1MD3 LINE L1 6687 6981 -901 4 765 230 136 0 22 chr13 23718976 23719021 -96565291 + GA-rich Low_complexity Low_complexity 1 44 0 4 765 746 82 18 0 chr13 23719023 23719133 -96565179 + (GAAA)n Simple_repeat Simple_repeat 4 115 0 4 765 227 191 33 33 chr13 23719159 23719251 -96565061 + (TTATA)n Simple_repeat Simple_repeat 1 92 0 4 765 226 295 166 61 chr13 23719252 23719613 -96564699 + L1MD3 LINE L1 7001 7399 -483 4 765 970 216 135 122 chr13 23719671 23719729 -96564583 - MTD LTR MaLR -2 417 364 4 765 1805 161 162 12 chr13 23719729 23719904 -96564408 - ORR1C2 LTR MaLR 0 384 190 4 765 414 0 0 0 chr13 23719904 23719950 -96564362 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 765 1805 161 162 12 chr13 23719950 23720108 -96564204 - ORR1C2 LTR MaLR -195 189 3 4 765 970 216 121 105 chr13 23720108 23720457 -96563855 - MTD LTR MaLR -56 363 3 4 765 265 227 40 0 chr13 23720461 23720536 -96563776 + L1MD3 LINE L1 7455 7532 -350 4 765 802 289 35 3 chr13 23720634 23720922 -96563390 + L1MD3 LINE L1 7684 7980 -15 4 765 30 27 0 0 chr13 23721078 23721115 -96563197 + AT_rich Low_complexity Low_complexity 1 37 0 4 765 247 303 120 10 chr13 23721314 23721414 -96562898 - PB1D10 SINE Alu -2 115 5 4 765 1311 180 9 13 chr13 23721447 23721672 -96562640 - URR1A DNA MER1_type -2 224 1 4 765 311 344 232 21 chr13 23721842 23722032 -96562280 + MLT1G LTR MaLR 287 516 -75 4 765 390 65 48 0 chr13 23722136 23722198 -96562114 + B1_Mm SINE Alu 82 146 -1 4 765 564 219 43 14 chr13 23722641 23722780 -96561532 - B3 SINE B2 -5 211 69 4 765 300 137 0 0 chr13 23722825 23722876 -96561436 + (TAA)n Simple_repeat Simple_repeat 1 51 0 4 95 1004 283 58 65 chr13 23723862 23724113 -96560199 - MTE2b LTR MaLR 0 379 119 4 766 3338 45 2 5 chr13 23724113 23724510 -96559802 + MTA_Mm LTR MaLR 1 396 0 4 766 1004 283 58 65 chr13 23724510 23724640 -96559672 - MTE2b LTR MaLR -261 118 1 4 766 560 315 82 22 chr13 23724640 23724953 -96559359 - MLT1F LTR MaLR -45 503 172 4 766 288 223 21 84 chr13 23725420 23725562 -96558750 + RLTR15 LTR ERVK 34 166 -193 4 766 256 289 64 34 chr13 23725560 23725796 -96558516 + RLTR15 LTR ERVK 99 341 -18 4 766 406 181 9 9 chr13 23726567 23726673 -96557639 + (TTTA)n Simple_repeat Simple_repeat 4 109 0 4 766 361 280 98 8 chr13 23726799 23726932 -96557380 - B4 SINE B4 -146 146 2 4 766 8614 33 2 0 chr13 23727076 23728285 -96556027 - L1Md_F2 LINE L1 -2 6580 5370 4 766 1123 92 0 30 chr13 23728296 23728464 -96555848 - L1Md_F2 LINE L1 0 6582 6420 4 766 2239 204 147 59 chr13 23728464 23729257 -96555055 - RMER19B LTR ERVK -39 863 1 4 766 1287 201 148 5 chr13 23729400 23729812 -96554500 - MT2A LTR ERVL -62 471 1 4 766 453 288 31 25 chr13 23730268 23730428 -96553884 - MER2 DNA MER2_type -10 335 175 4 766 787 154 0 15 chr13 23730441 23730573 -96553739 + URR1B DNA MER1_type 35 164 -61 4 766 1914 31 59 0 chr13 23730574 23730830 -96553482 - MTA_Mm LTR MaLR 0 396 126 4 766 1945 98 3 69 chr13 23730835 23731184 -96553128 - IAPLTR1a_Mm LTR ERVK -11 326 1 4 766 58668 14 7 5 chr13 23731184 23737652 -96546660 - IAPEz-int LTR ERVK 0 6481 1 4 766 1949 95 3 69 chr13 23737653 23738002 -96546310 - IAPLTR1a_Mm LTR ERVK -11 326 1 4 766 1126 21 0 0 chr13 23738002 23738136 -96546176 - MTA_Mm LTR MaLR -262 134 1 4 766 9699 16 1 5 chr13 23738136 23739238 -96545074 - MTA_Mm-int LTR MaLR 0 1098 1 4 766 3271 26 39 0 chr13 23739238 23739619 -96544693 - MTA_Mm LTR MaLR 0 396 1 4 766 345 167 0 15 chr13 23739625 23739692 -96544620 + URR1B DNA MER1_type 160 225 0 4 766 246 186 17 0 chr13 23739695 23739754 -96544558 - MER2 DNA MER2_type -163 182 123 4 766 301 80 100 0 chr13 23740014 23740064 -96544248 - ORR1B2 LTR MaLR 0 378 324 4 766 297 51 0 0 chr13 23740064 23740103 -96544209 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 766 5431 42 0 2 chr13 23740103 23740743 -96543569 - L1Md_F2 LINE L1 -30 6552 5914 4 766 1559 28 0 0 chr13 23740741 23740921 -96543391 + L1Md_F2 LINE L1 5725 5904 -678 4 766 2068 117 9 15 chr13 23740921 23741250 -96543062 - ORR1B2 LTR MaLR -40 327 1 4 766 1655 156 234 9 chr13 23741380 23741722 -96542590 - MTC LTR MaLR 0 421 3 4 766 763 196 7 7 chr13 23742312 23742456 -96541856 + B1_Mur1 SINE Alu 5 148 -1 4 766 567 241 34 27 chr13 23743543 23743692 -96540620 + B1_Mur4 SINE Alu 1 150 0 4 766 1386 19 0 0 chr13 23743790 23743951 -96540361 + (TC)n Simple_repeat Simple_repeat 1 161 0 4 766 420 20 0 0 chr13 23743951 23743999 -96540313 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 766 2182 209 23 149 chr13 23744096 23744794 -96539518 + RMER19C LTR ERVK 2 611 0 4 766 789 172 7 15 chr13 23745192 23745328 -96538984 + B1_Mur1 SINE Alu 5 139 -10 4 766 531 0 0 0 chr13 23745328 23745387 -96538925 + (CAAGA)n Simple_repeat Simple_repeat 5 63 0 5 766 23 0 0 0 chr13 23745392 23745415 -96538897 + AT_rich Low_complexity Low_complexity 1 23 0 5 766 219 284 15 0 chr13 23746577 23746644 -96537668 - L2a LINE L2 -256 3170 3103 5 766 315 141 0 0 chr13 23746759 23746823 -96537489 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 766 440 18 18 0 chr13 23747187 23747244 -96537068 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 5 766 429 217 0 0 chr13 23747259 23747351 -96536961 - MT2B LTR ERVL -61 540 449 5 766 712 277 79 72 chr13 23747648 23748052 -96536260 + MTD LTR MaLR 5 411 -8 5 766 6966 147 102 14 chr13 23748056 23748990 -96535322 + MTD-int LTR MaLR 1 1040 -923 5 766 1326 75 32 11 chr13 23748990 23749179 -96535133 + B2_Mm2 SINE B2 2 194 -1 5 766 6966 147 102 14 chr13 23749179 23749662 -96534650 + MTD-int LTR MaLR 1041 1542 -421 5 766 546 100 19 48 chr13 23749660 23749765 -96534547 + MTD-int LTR MaLR 1830 1931 -32 5 766 385 143 24 203 chr13 23749739 23749862 -96534450 + MTD LTR MaLR 5 116 -278 5 766 485 83 0 0 chr13 23749857 23749929 -96534383 + MTD LTR MaLR 255 326 0 5 766 377 240 77 0 chr13 23749929 23750031 -96534281 + MTD LTR MaLR 278 387 -32 5 766 1653 210 49 30 chr13 23750554 23750982 -96533330 - RMER10A LTR ERVL -6 436 1 5 766 278 309 134 43 chr13 23751469 23751655 -96532657 - Lx8 LINE L1 -7 7466 7264 5 766 423 160 0 0 chr13 23751677 23751752 -96532560 + (TG)n Simple_repeat Simple_repeat 1 75 0 5 766 603 0 0 0 chr13 23751856 23751923 -96532389 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 5 766 425 306 33 0 chr13 23752490 23752670 -96531642 + MER99 DNA hAT? 263 448 -383 5 766 213 143 0 23 chr13 23753688 23753731 -96530581 + T-rich Low_complexity Low_complexity 3 44 0 5 766 454 226 32 0 chr13 23754890 23754983 -96529329 + U6 snRNA snRNA 2 97 -10 5 766 436 250 0 53 chr13 23754993 23755107 -96529205 + Lx8 LINE L1 7045 7152 -321 5 766 381 58 0 0 chr13 23755107 23755159 -96529153 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 766 9942 96 16 13 chr13 23755611 23757060 -96527252 + Lx2 LINE L1 5545 6997 0 5 766 269 341 21 49 chr13 23757598 23757740 -96526572 + MLT1B LTR MaLR 247 384 -6 5 766 1016 307 84 11 chr13 23757744 23758281 -96526031 + MLT1B-int LTR MaLR 1 576 -795 5 766 555 43 0 0 chr13 23758289 23758359 -96525953 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 5 766 572 272 29 0 chr13 23758521 23758657 -96525655 - ID_B1 SINE B4 -6 218 79 5 766 597 139 0 0 chr13 23758719 23758827 -96525485 + (GA)n Simple_repeat Simple_repeat 2 109 0 5 766 1184 127 16 21 chr13 23758911 23759104 -96525208 - B2_Mm2 SINE B2 -2 193 2 5 766 288 301 78 0 chr13 23759446 23759599 -96524713 + MLT-int LTR MaLR 1359 1523 -212 5 766 446 234 65 0 chr13 23759639 23759746 -96524566 - B3 SINE B2 -98 118 5 5 766 505 285 47 159 chr13 23759734 23759867 -96524445 + MLT-int LTR MaLR 1469 1557 -178 5 766 1219 55 0 0 chr13 23759867 23760013 -96524299 - B1_Mus2 SINE Alu 0 147 2 5 766 505 285 47 159 chr13 23760013 23760175 -96524137 + MLT-int LTR MaLR 1558 1731 -4 5 766 1932 187 51 53 chr13 23760615 23760652 -96523660 + RMER5 LTR ERV1 13 46 -488 5 766 1388 77 28 0 chr13 23760652 23760834 -96523478 - B2_Mm2 SINE B2 -7 188 2 5 766 1932 187 51 53 chr13 23760834 23761283 -96523029 + RMER5 LTR ERV1 47 498 -36 5 766 1189 213 195 93 chr13 23762046 23762438 -96521874 - MT2A LTR ERVL -1 532 86 5 766 354 0 70 18 chr13 23762438 23762495 -96521817 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 5 766 1189 213 195 93 chr13 23762495 23762584 -96521728 - MT2A LTR ERVL -448 85 2 5 766 1385 225 64 26 chr13 23762804 23763147 -96521165 + Lx6 LINE L1 6794 7149 -311 5 766 3314 39 15 0 chr13 23763155 23763545 -96520767 + MTA_Mm LTR MaLR 1 396 0 5 766 264 59 0 0 chr13 23763806 23763840 -96520472 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 5 766 7471 107 25 21 chr13 23764080 23765199 -96519113 - Lx2B LINE L1 0 7000 5877 5 766 5403 144 89 0 chr13 23765199 23766117 -96518195 + Lx2B LINE L1 4861 5863 -1145 5 766 2087 172 5 16 chr13 23766651 23767034 -96517278 + RLTR14 LTR ERV1 4 382 0 5 766 26 93 0 0 chr13 23767441 23767516 -96516796 + AT_rich Low_complexity Low_complexity 1 75 0 5 766 24 67 0 0 chr13 23767618 23767663 -96516649 + AT_rich Low_complexity Low_complexity 1 45 0 5 766 24 0 0 0 chr13 23768233 23768257 -96516055 + AT_rich Low_complexity Low_complexity 1 24 0 5 766 200 130 57 57 chr13 23768635 23768741 -96515571 + (TATAA)n Simple_repeat Simple_repeat 1 106 0 5 766 259 137 68 0 chr13 23768660 23768733 -96515579 + (TA)n Simple_repeat Simple_repeat 1 78 0 5 766 498 108 0 0 chr13 23768875 23768949 -96515363 + (TA)n Simple_repeat Simple_repeat 2 75 0 5 766 299 175 16 16 chr13 23768949 23769013 -96515299 + MTD LTR MaLR 356 419 0 5 766 2326 215 17 8 chr13 23769767 23770283 -96514029 + RMER5 LTR ERV1 1 521 -13 5 766 522 98 0 0 chr13 23770323 23770405 -96513907 + (CCA)n Simple_repeat Simple_repeat 2 83 0 5 766 252 111 0 0 chr13 23770416 23770461 -96513851 + (TTTTTG)n Simple_repeat Simple_repeat 3 47 0 5 766 1988 108 72 24 chr13 23770891 23771223 -96513089 + Lx LINE L1 6307 6654 0 5 766 248 200 33 22 chr13 23771398 23771490 -96512822 + (TA)n Simple_repeat Simple_repeat 2 94 0 5 766 1163 80 100 22 chr13 23771961 23772141 -96512171 - B2_Mm2 SINE B2 0 195 2 5 766 789 57 0 0 chr13 23772907 23773012 -96511300 - L1_Mus2 LINE L1 -1 6565 6461 5 766 210 71 0 0 chr13 23773305 23773333 -96510979 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 5 766 301 307 49 21 chr13 23774070 23774089 -96510223 + B1F SINE Alu 1 76 -73 5 766 401 296 0 9 chr13 23774089 23774198 -96510114 + ID_B1 SINE B4 99 206 -18 5 766 301 307 49 21 chr13 23774198 23774213 -96510099 + B1F SINE Alu 77 147 -2 5 766 377 317 42 7 chr13 23774227 23774370 -96509942 + B1F SINE Alu 1 148 -1 5 766 440 241 102 0 chr13 23774412 23774520 -96509792 - 5S rRNA rRNA -1 120 2 5 766 514 208 19 9 chr13 23774717 23774824 -96509488 + PB1D9 SINE Alu 5 112 -8 5 766 239 54 0 26 chr13 23774824 23774862 -96509450 + (CAGC)n Simple_repeat Simple_repeat 2 38 0 5 766 331 136 102 0 chr13 23774988 23775047 -96509265 + Lx7 LINE L1 6822 6886 -810 5 766 378 0 0 0 chr13 23777815 23777857 -96506455 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 766 542 63 13 0 chr13 23777857 23777936 -96506376 + (GA)n Simple_repeat Simple_repeat 2 81 0 5 766 189 0 0 0 chr13 23779698 23779719 -96504593 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 766 1026 99 0 14 chr13 23779719 23779855 -96504457 - B1_Mus1 SINE Alu -12 136 2 5 766 209 0 97 0 chr13 23780382 23780413 -96503899 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 766 180 0 0 0 chr13 23780533 23780553 -96503759 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 5 766 405 234 11 11 chr13 23780556 23780651 -96503661 - RSINE1 SINE B4 -63 102 8 5 766 567 260 117 25 chr13 23781061 23781258 -96503054 + B3 SINE B2 1 215 -1 5 766 250 167 89 0 chr13 23781258 23781348 -96502964 + (TATAA)n Simple_repeat Simple_repeat 1 98 0 5 766 225 314 219 0 chr13 23781640 23781745 -96502567 + MTEb LTR MaLR 23 150 -229 5 766 317 200 246 0 chr13 23781760 23781890 -96502422 + MTEb LTR MaLR 205 366 -13 5 766 204 40 0 0 chr13 23781896 23781921 -96502391 + (TAA)n Simple_repeat Simple_repeat 2 26 0 5 766 459 52 0 0 chr13 23784666 23784724 -96499588 + (GA)n Simple_repeat Simple_repeat 2 59 0 5 766 351 0 0 0 chr13 23786087 23786126 -96498186 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 766 214 259 51 17 chr13 23786127 23786186 -96498126 - ID4_ SINE ID -6 77 17 5 766 244 248 127 45 chr13 23786635 23786745 -96497567 - PB1D7 SINE Alu 0 120 2 5 766 261 0 0 0 chr13 23788892 23788921 -96495391 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 766 382 252 78 16 chr13 23789315 23789444 -96494868 + B3A SINE B2 3 139 -59 5 766 632 261 139 0 chr13 23791242 23791422 -96492890 + B3 SINE B2 7 211 -5 5 766 26 30 0 0 chr13 23791623 23791656 -96492656 + AT_rich Low_complexity Low_complexity 1 33 0 5 766 714 105 14 63 chr13 23791801 23791943 -96492369 + B2_Mm1t SINE B2 58 192 -1 5 766 361 233 144 23 chr13 23793040 23793172 -96491140 - ID_B1 SINE B4 -1 223 76 5 766 296 265 176 0 chr13 23793661 23793763 -96490549 + ID_B1 SINE B4 99 218 -6 5 766 236 364 0 0 chr13 23794263 23794351 -96489961 + (CA)n Simple_repeat Simple_repeat 1 88 0 5 766 3477 35 2 0 chr13 23794717 23795112 -96489200 + MTA_Mm LTR MaLR 1 396 0 5 766 278 192 0 0 chr13 23796441 23796493 -96487819 + RLTR12B LTR ERVK 19 70 -458 5 766 189 121 0 0 chr13 23796971 23797004 -96487308 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 5 766 324 0 0 0 chr13 23798097 23798133 -96486179 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 766 312 268 64 2 chr13 23798349 23798481 -96485831 + B1F SINE Alu 3 149 0 5 766 399 250 18 71 chr13 23798509 23798621 -96485691 + B1F SINE Alu 11 116 -33 5 766 3189 140 26 103 chr13 23799065 23799823 -96484489 + RMER6A LTR ERVK 57 756 0 5 766 507 279 0 22 chr13 23800757 23800896 -96483416 + B1F SINE Alu 6 141 -8 5 766 916 124 64 12 chr13 23801146 23801317 -96482995 + URR1A DNA MER1_type 47 226 0 5 766 227 170 0 54 chr13 23801969 23802025 -96482287 + C-rich Low_complexity Low_complexity 2 54 0 5 766 213 94 0 0 chr13 23802526 23802558 -96481754 + (CAG)n Simple_repeat Simple_repeat 1 32 0 5 766 374 221 65 58 chr13 23802738 23802877 -96481435 + B1F SINE Alu 9 148 -1 5 766 201 108 0 0 chr13 23802877 23802914 -96481398 + (CCAA)n Simple_repeat Simple_repeat 4 40 0 5 766 585 299 39 0 chr13 23803629 23803783 -96480529 - RSINE1 SINE B4 -2 163 4 5 766 238 320 26 0 chr13 23803966 23804044 -96480268 + L1M5 LINE L1 5473 5552 -642 5 766 282 288 48 56 chr13 23804205 23804330 -96479982 - RLTR40 LTR ERVK -45 772 649 5 766 397 85 49 0 chr13 23804398 23804480 -96479832 + (CAGAGA)n Simple_repeat Simple_repeat 3 88 0 5 766 600 283 143 12 chr13 23804482 23804731 -96479581 - RLTR40 LTR ERVK -239 578 303 5 766 1326 75 0 0 chr13 23804731 23805011 -96479301 + (CA)n Simple_repeat Simple_repeat 1 280 0 5 766 600 283 143 12 chr13 23805011 23805178 -96479134 - RLTR40 LTR ERVK -515 302 107 5 766 3468 178 68 19 chr13 23805665 23805924 -96478388 + RLTR40 LTR ERVK 2 286 -531 5 766 1744 181 92 28 chr13 23805924 23806145 -96478167 - RLTR14 LTR ERV1 0 382 161 6 766 237 33 0 0 chr13 23806145 23806175 -96478137 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 766 1744 181 92 28 chr13 23806175 23806312 -96478000 - RLTR14 LTR ERV1 -222 160 2 6 766 3468 178 68 19 chr13 23806312 23806822 -96477490 + RLTR40 LTR ERVK 287 808 -9 5 766 4333 124 99 47 chr13 23807058 23807827 -96476485 - RMER17D2 LTR ERVK 0 809 1 6 766 622 280 36 0 chr13 23808189 23808357 -96475955 + ORR1D2 LTR MaLR 1 174 -196 6 766 218 32 0 31 chr13 23809171 23809203 -96475109 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 6 766 260 125 0 0 chr13 23809547 23809595 -96474717 + RLTR19-int LTR ERVK 141 188 -5218 6 766 315 227 52 26 chr13 23809630 23809707 -96474605 + RLTR19-int LTR ERVK 741 819 -4587 6 766 711 167 25 0 chr13 23809712 23809832 -96474480 + RLTR19-int LTR ERVK 938 1060 -5077 6 766 8323 143 77 44 chr13 23809847 23811703 -96472609 + ETnERV2-int LTR ERVK 3331 4678 -2728 6 766 3338 54 0 2 chr13 23811702 23812110 -96472202 + ETnERV2-int LTR ERVK 5356 5762 -1644 6 766 6359 170 72 48 chr13 23812097 23813546 -96470766 + ETnERV3-int LTR ERVK 3904 5388 -420 6 766 2727 82 20 0 chr13 23813571 23813976 -96470336 + RLTR13D5 LTR ERVK 291 703 -320 6 766 342 250 19 19 chr13 23814303 23814409 -96469903 + RNERVK23-int LTR ERVK 7643 7748 -469 6 766 469 331 13 0 chr13 23814518 23814669 -96469643 + ETnERV3-int LTR ERVK 6494 6646 -760 6 766 4432 122 37 116 chr13 23816078 23817059 -96467253 + RMER17A2 LTR ERVK 1 903 -3 6 766 547 210 14 85 chr13 23817177 23817423 -96466889 + RMER2 LTR ERV1 4 334 -233 6 766 180 77 0 0 chr13 23817439 23817465 -96466847 + (C)n Simple_repeat Simple_repeat 1 26 0 6 766 290 93 0 0 chr13 23818627 23818670 -96465642 - ORR1C2 LTR MaLR 0 384 342 6 766 27 73 0 0 chr13 23818943 23818998 -96465314 + AT_rich Low_complexity Low_complexity 1 55 0 6 766 276 307 0 13 chr13 23819682 23819758 -96464554 - BC1_Mm scRNA scRNA -64 88 14 6 766 291 263 92 42 chr13 23819779 23819898 -96464414 - PB1 SINE Alu -2 125 1 6 766 1571 82 0 10 chr13 23819944 23820152 -96464160 - L1_Mus1 LINE L1 -92 6475 6270 6 766 283 337 9 75 chr13 23820308 23820414 -96463898 + PB1D7 SINE Alu 1 99 -21 6 766 432 55 0 0 chr13 23822093 23822148 -96462164 + (A)n Simple_repeat Simple_repeat 1 55 0 6 766 198 0 0 0 chr13 23822221 23822243 -96462069 + (TC)n Simple_repeat Simple_repeat 1 22 0 6 766 223 93 47 0 chr13 23822260 23822303 -96462009 + (GAAA)n Simple_repeat Simple_repeat 2 46 0 6 766 314 306 29 101 chr13 23824714 23824752 -96459560 - ID_B1 SINE B4 -9 215 88 6 766 453 250 20 0 chr13 23824752 23824852 -96459460 - B1F SINE Alu -41 108 7 6 766 206 81 54 0 chr13 23824866 23824903 -96459409 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 6 766 509 228 36 7 chr13 23824904 23825041 -96459271 - B1_Mur1 SINE Alu -8 141 1 6 766 359 316 45 13 chr13 23825371 23825528 -96458784 - MIR SINE MIR -59 203 42 6 766 582 28 0 0 chr13 23825988 23826060 -96458252 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 766 309 51 0 0 chr13 23832800 23832839 -96451473 + (CACCC)n Simple_repeat Simple_repeat 3 41 0 6 766 253 246 169 0 chr13 23832857 23832922 -96451390 - B1_Mur4 SINE Alu -7 143 68 6 766 253 281 48 12 chr13 23833663 23833746 -96450566 + B1_Mur1 SINE Alu 57 142 -7 6 766 219 161 0 75 chr13 23834135 23834163 -96450149 + A-rich Low_complexity Low_complexity 2 26 0 6 766 524 209 82 0 chr13 23834163 23834297 -96450015 + B1_Mur2 SINE Alu 5 149 0 6 766 219 161 0 75 chr13 23834297 23834335 -96449977 + A-rich Low_complexity Low_complexity 27 63 0 6 766 254 254 0 0 chr13 23834403 23834470 -96449842 + ID4_ SINE ID 6 72 -11 6 766 186 106 42 21 chr13 23836298 23836346 -96447966 + CT-rich Low_complexity Low_complexity 6 54 0 6 766 22 0 0 0 chr13 23839774 23839796 -96444516 + AT_rich Low_complexity Low_complexity 1 22 0 6 766 564 200 65 22 chr13 23839904 23840042 -96444270 + B1_Mus1 SINE Alu 2 145 -3 6 766 248 0 31 0 chr13 23840074 23840106 -96444206 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 6 766 293 397 8 0 chr13 23840637 23840768 -96443544 - ID_B1 SINE B4 -43 181 50 6 766 187 144 34 67 chr13 23840820 23840909 -96443403 + T-rich Low_complexity Low_complexity 3 88 0 6 766 297 247 34 45 chr13 23845566 23845655 -96438657 + ID_B1 SINE B4 124 211 -13 6 766 29 70 0 0 chr13 23846116 23846173 -96438139 + AT_rich Low_complexity Low_complexity 1 57 0 6 766 26 30 0 0 chr13 23846391 23846424 -96437888 + AT_rich Low_complexity Low_complexity 1 33 0 6 766 226 276 105 0 chr13 23847098 23847174 -96437138 + PB1D10 SINE Alu 12 95 -22 6 766 260 211 0 14 chr13 23847190 23847262 -96437050 + GA-rich Low_complexity Low_complexity 3 73 0 6 766 2195 168 14 28 chr13 23847640 23848063 -96436249 - MTC LTR MaLR -4 417 1 6 766 459 304 7 13 chr13 23850504 23850654 -96433658 - RMER5 LTR ERV1 -9 525 377 6 766 728 234 22 85 chr13 23850659 23850883 -96433429 - B3 SINE B2 -1 215 6 6 766 23 33 0 0 chr13 23850896 23850926 -96433386 + AT_rich Low_complexity Low_complexity 1 30 0 6 766 485 324 74 0 chr13 23850933 23851081 -96433231 - RSINE1 SINE B4 0 165 7 6 766 300 294 0 0 chr13 23851090 23851158 -96433154 - B1F SINE Alu -20 129 62 6 767 867 71 71 0 chr13 23856655 23856782 -96427530 - B1_Mus2 SINE Alu -11 136 1 6 767 365 261 92 8 chr13 23857058 23857178 -96427134 - RSINE1 SINE B4 -35 130 1 6 767 319 256 11 22 chr13 23857238 23857330 -96426982 + PB1D10 SINE Alu 21 111 -6 6 767 285 214 42 28 chr13 23857862 23857934 -96426378 - B3A SINE B2 -119 79 7 6 767 26 64 0 0 chr13 23857951 23857998 -96426314 + AT_rich Low_complexity Low_complexity 1 47 0 6 767 225 0 0 0 chr13 23858036 23858061 -96426251 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 6 767 903 157 20 0 chr13 23858075 23858222 -96426090 - B1_Mur4 SINE Alu 0 150 1 6 767 1553 169 86 21 chr13 23858374 23858712 -96425600 + MTC LTR MaLR 62 421 0 6 767 366 264 45 0 chr13 23858893 23859003 -96425309 + B4 SINE B4 1 115 -177 6 767 238 299 0 0 chr13 23859160 23859227 -96425085 + MER34 LTR ERV1 455 521 -21 6 767 247 193 0 34 chr13 23859358 23859387 -96424925 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 767 186 43 0 0 chr13 23859387 23859410 -96424902 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 767 247 193 0 34 chr13 23859410 23859439 -96424873 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 767 333 0 0 0 chr13 23859457 23859494 -96424818 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 767 1344 236 31 65 chr13 23859561 23859946 -96424366 + ORR1D1 LTR MaLR 3 374 0 6 767 405 0 0 0 chr13 23860453 23860498 -96423814 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 767 385 315 15 30 chr13 23860875 23861006 -96423306 - ID_B1 SINE B4 -13 211 83 6 767 950 94 6 24 chr13 23861189 23861353 -96422959 + (GAAA)n Simple_repeat Simple_repeat 1 161 0 6 767 3421 40 2 0 chr13 23861567 23861962 -96422350 + MTA_Mm LTR MaLR 1 396 0 6 767 941 77 0 40 chr13 23863155 23863303 -96421009 + B1_Mur4 SINE Alu 7 148 -2 6 767 708 214 189 89 chr13 23863683 23864143 -96420169 - RMER4B LTR ERVK -11 574 60 6 767 1100 57 43 0 chr13 23864143 23864284 -96420028 + B1_Mus1 SINE Alu 2 148 0 6 767 510 201 144 91 chr13 23864284 23864332 -96419980 - RMER4B LTR ERVK -407 59 22 6 767 459 0 0 0 chr13 23865310 23865361 -96418951 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 767 442 208 9 38 chr13 23865644 23865749 -96418563 + ID_B1 SINE B4 82 183 -41 6 767 770 161 42 0 chr13 23866234 23866377 -96417935 - B1_Mur2 SINE Alu 0 149 1 6 767 1228 302 87 35 chr13 23866468 23867453 -96416859 - L1M4c LINE L1 -3012 3370 2332 6 767 213 113 0 86 chr13 23867611 23867669 -96416643 + (TTA)n Simple_repeat Simple_repeat 1 53 0 6 767 724 187 104 18 chr13 23867786 23867949 -96416363 + MTEb LTR MaLR 9 185 -194 6 767 402 219 33 58 chr13 23867970 23868091 -96416221 + MTEb LTR MaLR 262 379 0 6 767 453 246 187 57 chr13 23868173 23868419 -96415893 - RLTR9A LTR ERVK -90 278 1 6 767 1817 127 141 22 chr13 23868897 23869260 -96415052 - MTC LTR MaLR 0 421 16 6 767 198 0 0 0 chr13 23870336 23870358 -96413954 + (T)n Simple_repeat Simple_repeat 1 22 0 6 767 1983 211 38 40 chr13 23870568 23871122 -96413190 - RLTR31_Mur LTR ERVK 0 553 1 6 767 441 0 0 0 chr13 23871477 23871526 -96412786 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 767 459 0 0 0 chr13 23871526 23871576 -96412736 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 767 243 0 0 0 chr13 23871996 23872023 -96412289 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 767 3731 178 94 56 chr13 23872258 23872849 -96411463 - L1_Rod LINE L1 -3486 2361 1726 6 767 6236 57 1 1 chr13 23872849 23873612 -96410700 - L1_Mus2 LINE L1 0 6566 5804 6 767 3731 178 94 56 chr13 23873612 23873991 -96410321 - L1_Rod LINE L1 -4122 1725 1354 6 767 403 301 53 11 chr13 23874066 23874254 -96410058 + MER3 DNA MER1_type 2 197 -12 6 767 630 283 115 13 chr13 23874920 23875146 -96409166 + B4A SINE B4 34 282 -10 6 767 211 146 49 0 chr13 23875214 23875255 -96409057 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 767 213 163 20 20 chr13 23875247 23875297 -96409015 + (CCA)n Simple_repeat Simple_repeat 1 50 0 6 767 405 0 0 0 chr13 23875724 23875769 -96408543 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 6 767 735 206 7 0 chr13 23875781 23875922 -96408390 - B1_Mur2 SINE Alu -7 142 1 6 767 2064 121 12 64 chr13 23876725 23877069 -96407243 + ORR1A3 LTR MaLR 1 326 0 6 767 694 264 86 20 chr13 23877481 23877678 -96406634 + ID_B1 SINE B4 2 211 -13 6 767 292 219 211 94 chr13 23878232 23878403 -96405909 - B2_Mm2 SINE B2 -3 192 2 6 767 1415 199 144 6 chr13 23878960 23879314 -96404998 - RMER10A LTR ERVL -29 413 11 6 767 434 276 120 60 chr13 23879695 23879996 -96404316 - L1MB3 LINE L1 -20 6163 5845 6 767 1402 221 152 3 chr13 23881543 23881930 -96402382 - Lx9 LINE L1 -676 6968 6524 6 767 695 224 3 69 chr13 23881930 23882149 -96402163 - ORR1D1 LTR MaLR -173 194 1 7 767 246 189 0 54 chr13 23883580 23883636 -96400676 + MT2B LTR ERVL 63 115 -418 7 767 1354 80 11 0 chr13 23883664 23883839 -96400473 - B2_Mm2 SINE B2 -14 181 5 7 767 572 261 81 53 chr13 23883851 23883901 -96400411 + MT2B LTR ERVL 286 339 -262 7 767 438 20 0 0 chr13 23883901 23883952 -96400360 + (TC)n Simple_repeat Simple_repeat 2 52 0 7 767 572 261 81 53 chr13 23883952 23884148 -96400164 + MT2B LTR ERVL 340 539 -62 7 767 275 0 29 0 chr13 23884158 23884193 -96400119 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 767 548 95 12 0 chr13 23884195 23884279 -96400033 + (CATA)n Simple_repeat Simple_repeat 4 88 0 7 767 621 164 99 56 chr13 23884719 23884861 -96399451 - B1_Mur1 SINE Alu 0 149 2 7 767 596 224 38 53 chr13 23884926 23885058 -96399254 - B1F SINE Alu -13 136 7 7 767 685 296 36 23 chr13 23885089 23885310 -96399002 - ID_B1 SINE B4 0 224 1 7 767 207 179 0 0 chr13 23885633 23885672 -96398640 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 7 767 405 0 0 0 chr13 23885816 23885861 -96398451 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 767 1469 194 37 74 chr13 23885940 23886290 -96398022 - ORR1D1 LTR MaLR -35 339 3 7 767 2424 142 3 16 chr13 23886568 23886953 -96397359 - RLTR14 LTR ERV1 -2 380 1 7 767 6495 158 149 48 chr13 23886953 23889830 -96394482 - RLTR14-int LTR ERV1 0 5317 2149 7 767 1114 166 11 22 chr13 23890029 23890214 -96394098 - RLTR14-int LTR ERV1 -3712 1605 1423 7 767 2680 142 12 52 chr13 23890309 23890793 -96393519 - RLTR14-int LTR ERV1 -4383 934 470 7 767 810 177 0 7 chr13 23890793 23890941 -96393371 - MT2A LTR ERVL -386 147 1 7 767 471 266 85 15 chr13 23890949 23891079 -96393233 + B3 SINE B2 71 209 -7 7 767 313 214 0 18 chr13 23891120 23891177 -96393135 + B4 SINE B4 216 271 -21 7 767 342 0 0 0 chr13 23892226 23892264 -96392048 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 767 261 0 0 0 chr13 23892573 23892602 -96391710 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 767 208 0 62 0 chr13 23892668 23892700 -96391612 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 7 767 24 32 0 0 chr13 23892841 23892872 -96391440 + AT_rich Low_complexity Low_complexity 1 31 0 7 767 286 23 23 23 chr13 23892993 23893037 -96391275 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 767 677 222 129 5 chr13 23893086 23893272 -96391040 - L1_Mur3 LINE L1 -341 5539 5331 7 767 186 43 0 0 chr13 23894038 23894061 -96390251 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7 767 324 0 0 0 chr13 23895234 23895270 -96389042 + (GA)n Simple_repeat Simple_repeat 2 37 0 7 767 427 241 71 8 chr13 23895363 23895474 -96388838 + B1F SINE Alu 1 116 -1 7 767 419 19 0 0 chr13 23895500 23895552 -96388760 - U5 snRNA snRNA -64 52 1 7 767 316 338 48 45 chr13 23895758 23895823 -96388489 - L1M5 LINE L1 -1576 4570 4505 7 767 1138 265 52 41 chr13 23895823 23896189 -96388123 - ORR1D2 LTR MaLR 0 370 1 7 767 316 338 48 45 chr13 23896189 23896414 -96387898 - L1M5 LINE L1 -1642 4504 4279 7 767 304 329 0 0 chr13 23896872 23896951 -96387361 - ID4_ SINE ID 0 83 5 7 767 469 308 14 14 chr13 23897218 23897363 -96386949 + MLT1D LTR MaLR 347 491 -14 7 767 236 196 71 0 chr13 23897383 23897439 -96386873 + RMER15 LTR ERVL 1 60 -515 7 767 413 222 126 27 chr13 23897450 23897561 -96386751 + RMER15 LTR ERVL 19 140 -435 7 767 862 239 105 4 chr13 23897617 23897856 -96386456 + RMER15 LTR ERVL 313 575 0 7 767 454 279 85 23 chr13 23897856 23898031 -96386281 + B3A SINE B2 12 197 -1 7 767 25 0 0 0 chr13 23898050 23898075 -96386237 + AT_rich Low_complexity Low_complexity 1 25 0 7 767 23 0 0 0 chr13 23899803 23899826 -96384486 + AT_rich Low_complexity Low_complexity 1 23 0 7 767 246 315 164 30 chr13 23899965 23900099 -96384213 - MIR SINE MIR -79 183 32 7 767 922 323 10 20 chr13 23901024 23901318 -96382994 + B4 SINE B4 2 292 0 7 767 830 258 83 20 chr13 23901743 23901996 -96382316 - MTE2b LTR MaLR -109 270 2 7 767 1191 89 0 0 chr13 23902404 23902550 -96381762 - B1_Mus2 SINE Alu 0 147 2 7 767 478 280 0 0 chr13 23903497 23903604 -96380708 + PB1 SINE Alu 1 107 -20 7 767 327 214 144 11 chr13 23904072 23904162 -96380150 + B1F1 SINE Alu 40 141 -8 7 767 320 267 28 47 chr13 23904173 23904279 -96380033 + BC1_Mm scRNA scRNA 1 104 -48 7 767 490 286 98 76 chr13 23904869 23905266 -96379046 + LTR37A LTR ERV1 20 425 -1 7 767 746 179 7 58 chr13 23905713 23905867 -96378445 - B1_Mur2 SINE Alu -1 148 3 7 767 816 277 14 29 chr13 23906224 23906432 -96377880 - B3 SINE B2 -11 205 1 7 767 236 356 0 40 chr13 23907367 23907443 -96376869 + B4 SINE B4 76 148 -144 7 767 322 268 42 0 chr13 23907387 23907458 -96376854 + B1F2 SINE Alu 8 81 -68 7 767 379 373 36 24 chr13 23907654 23907819 -96376493 - MIR SINE MIR -87 175 9 7 767 255 103 0 0 chr13 23908558 23908597 -96375715 + (AATAG)n Simple_repeat Simple_repeat 5 43 0 7 767 597 261 35 7 chr13 23908821 23908964 -96375348 - B1F1 SINE Alu -2 147 1 7 767 302 0 0 26 chr13 23910658 23910697 -96373615 + (TTTG)n Simple_repeat Simple_repeat 4 41 0 7 767 201 378 12 0 chr13 23911386 23911468 -96372844 - MIR SINE MIR -102 160 78 7 767 413 320 77 18 chr13 23912373 23912626 -96371686 - MIR SINE MIR -6 256 1 7 767 181 340 20 0 chr13 23912954 23913004 -96371308 - L2a LINE L2 -21 3405 3355 7 767 21 0 0 0 chr13 23914120 23914141 -96370171 + AT_rich Low_complexity Low_complexity 1 21 0 7 767 232 323 113 0 chr13 23914386 23914510 -96369802 + MER5B DNA MER1_type 1 138 -40 7 767 6579 200 42 48 chr13 23915657 23916245 -96368067 + Lx7 LINE L1 6061 6656 -1040 7 767 204 67 0 0 chr13 23916245 23916275 -96368037 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 767 6579 200 42 48 chr13 23916275 23917148 -96367164 + Lx7 LINE L1 6657 7513 -183 7 767 418 279 0 19 chr13 23917198 23917304 -96367008 - PB1D10 SINE Alu -10 107 4 7 767 856 291 55 48 chr13 23917335 23917606 -96366706 - B4 SINE B4 -19 273 1 7 767 225 0 0 0 chr13 23918376 23918401 -96365911 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 767 487 304 12 37 chr13 23919358 23919522 -96364790 + RSINE1 SINE B4 1 160 -5 7 767 487 304 24 53 chr13 23919562 23919732 -96364580 - ORR1E LTR MaLR -184 175 11 7 767 361 250 57 9 chr13 23920251 23920356 -96363956 - PB1D10 SINE Alu -7 110 1 7 767 711 115 0 16 chr13 23920504 23920628 -96363684 + Lx LINE L1 6531 6652 -2 7 767 3979 66 2 8 chr13 23920656 23921146 -96363166 - L1Md_F2 LINE L1 -2 6580 6094 7 767 207 100 0 0 chr13 23921466 23921496 -96362816 + (A)n Simple_repeat Simple_repeat 1 30 0 7 767 669 329 74 63 chr13 23921568 23921837 -96362475 + B4 SINE B4 15 286 -6 7 767 306 0 0 0 chr13 23921862 23921896 -96362416 + (TC)n Simple_repeat Simple_repeat 1 34 0 7 767 357 24 0 0 chr13 23921896 23921937 -96362375 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 767 225 0 0 0 chr13 23921937 23921961 -96362351 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 767 328 342 57 38 chr13 23921999 23922157 -96362155 + MLT1I-int LTR MaLR 823 983 -404 7 767 269 355 58 29 chr13 23922499 23922673 -96361639 + MLT1I LTR MaLR 183 361 -50 7 767 189 107 0 0 chr13 23922874 23922902 -96361410 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 7 767 1405 191 129 35 chr13 23922935 23923277 -96361035 - ORR1D1 LTR MaLR 0 374 1 7 767 336 273 57 45 chr13 23923433 23923590 -96360722 - L1MEe LINE L1 -4548 306 148 7 767 181 0 69 0 chr13 23924284 23924313 -96359999 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 767 277 287 110 68 chr13 23924587 23924733 -96359579 + MLT1A0 LTR MaLR 1 152 -213 7 767 428 175 0 36 chr13 23924737 23924820 -96359492 + ID4 SINE ID 2 81 -2 7 767 904 132 0 42 chr13 23924845 23924987 -96359325 + B2_Mm2 SINE B2 26 161 -34 7 767 333 0 0 0 chr13 23924987 23925024 -96359288 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 7 767 272 200 14 58 chr13 23925203 23925272 -96359040 - B1_Mur3 SINE Alu -82 67 2 7 767 307 157 29 0 chr13 23926430 23926500 -96357812 + GA-rich Low_complexity Low_complexity 3 74 0 7 767 285 278 14 14 chr13 23926500 23926573 -96357739 + B4 SINE B4 84 156 -136 7 767 328 219 164 0 chr13 23926523 23926596 -96357716 + B1_Mur1 SINE Alu 23 107 -42 7 767 751 335 5 0 chr13 23926792 23926992 -96357320 + B4 SINE B4 34 234 -58 7 767 2100 198 14 47 chr13 23926992 23927417 -96356895 + MTD LTR MaLR 1 411 -8 7 767 288 0 0 0 chr13 23927461 23927493 -96356819 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 767 911 194 0 0 chr13 23927794 23927933 -96356379 + B1_Mur2 SINE Alu 2 140 -9 7 767 269 264 124 35 chr13 23927991 23928136 -96356176 + Lx8 LINE L1 7287 7444 -29 7 767 242 29 29 0 chr13 23929794 23929829 -96354483 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 7 767 730 290 70 26 chr13 23929932 23930267 -96354045 + L1_Rod LINE L1 5465 5805 -78 7 767 1886 306 52 3 chr13 23930276 23930771 -96353541 + Lx8 LINE L1 6821 7326 -147 7 767 447 19 0 0 chr13 23930771 23930823 -96353489 + (GGA)n Simple_repeat Simple_repeat 1 52 0 7 767 1886 306 52 3 chr13 23930823 23930940 -96353372 + Lx8 LINE L1 7327 7462 -11 7 767 196 277 0 29 chr13 23931724 23931895 -96352417 + GA-rich Low_complexity Low_complexity 5 170 0 7 767 244 61 82 0 chr13 23932126 23932175 -96352137 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 7 767 1487 184 30 13 chr13 23932430 23932733 -96351579 - RMER5 LTR ERV1 -2 532 225 7 767 870 248 14 29 chr13 23932816 23933024 -96351288 - RMER5 LTR ERV1 -315 219 15 7 767 379 312 27 18 chr13 23933299 23933410 -96350902 + B4A SINE B4 1 112 -180 7 767 306 0 0 0 chr13 23933727 23933761 -96350551 + (TC)n Simple_repeat Simple_repeat 1 34 0 7 767 548 129 28 21 chr13 23934080 23934222 -96350090 + (TCTCTG)n Simple_repeat Simple_repeat 2 144 0 7 767 262 322 115 30 chr13 23935393 23935627 -96348685 + L2a LINE L2 2821 3105 -321 7 767 192 77 0 0 chr13 23936072 23936098 -96348214 + (GA)n Simple_repeat Simple_repeat 1 26 0 7 767 390 154 165 0 chr13 23937032 23937123 -96347189 - ID_B1 SINE B4 -1 223 118 8 767 640 283 33 39 chr13 23937498 23937678 -96346634 - B4A SINE B4 -113 179 1 8 767 278 269 12 25 chr13 23937744 23937824 -96346488 - ID4 SINE ID -3 80 2 8 767 372 298 29 0 chr13 23937851 23937955 -96346357 - B1F1 SINE Alu -7 142 36 8 767 1167 117 0 0 chr13 23938338 23938518 -96345794 + (TTC)n Simple_repeat Simple_repeat 1 180 0 8 767 227 235 0 0 chr13 23938518 23938562 -96345750 + CT-rich Low_complexity Low_complexity 4 47 0 8 767 550 176 0 71 chr13 23938564 23938662 -96345650 - B1_Mur2 SINE Alu -57 92 2 8 767 267 343 53 79 chr13 23938662 23938688 -96345624 - B4A SINE B4 -213 79 57 8 767 607 325 6 50 chr13 23939316 23939475 -96344837 - RSINE1 SINE B4 -12 153 2 8 767 321 277 55 73 chr13 23939981 23940090 -96344222 + B1F1 SINE Alu 10 116 -1 8 767 342 270 11 11 chr13 23940538 23940628 -96343684 + RMER30 DNA MER1_type 7 96 -106 8 767 490 226 132 10 chr13 23940645 23940842 -96343470 + Lx8 LINE L1 7224 7444 -29 8 767 425 302 17 0 chr13 23940874 23940990 -96343322 - Charlie12 DNA MER1_type -2754 119 2 8 767 21 0 0 0 chr13 23941106 23941127 -96343185 + AT_rich Low_complexity Low_complexity 1 21 0 8 767 201 140 53 0 chr13 23941235 23941292 -96343020 + GA-rich Low_complexity Low_complexity 2 61 0 8 767 588 236 99 23 chr13 23941987 23942012 -96342300 - L1MA6 LINE L1 -3 6297 6270 8 767 411 21 0 0 chr13 23942012 23942060 -96342252 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 767 588 236 99 23 chr13 23942060 23942255 -96342057 - L1MA6 LINE L1 -31 6269 6061 8 767 481 239 141 55 chr13 23943350 23943549 -96340763 + B3A SINE B2 1 216 0 8 767 1999 118 21 74 chr13 23944451 23944790 -96339522 - ORR1A4 LTR MaLR -8 321 1 8 767 287 273 0 0 chr13 23945330 23945418 -96338894 + L1MD LINE L1 2416 2503 -3643 8 767 980 259 25 0 chr13 23945420 23945617 -96338695 + ID_B1 SINE B4 3 204 -20 8 767 363 250 45 11 chr13 23945669 23945758 -96338554 + B4A SINE B4 163 254 -38 8 767 228 86 0 0 chr13 23945760 23945795 -96338517 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 8 767 252 100 0 0 chr13 23945801 23945841 -96338471 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 767 438 286 94 25 chr13 23945856 23946290 -96338022 + L1MD LINE L1 5035 5490 -689 8 767 1002 273 15 5 chr13 23946441 23946739 -96337573 + L1MA4 LINE L1 5613 5939 -361 8 767 290 117 33 0 chr13 23946790 23946850 -96337462 + (CATA)n Simple_repeat Simple_repeat 4 65 0 8 767 206 133 0 0 chr13 23946939 23946969 -96337343 + (TA)n Simple_repeat Simple_repeat 2 31 0 8 767 361 145 13 13 chr13 23946969 23947046 -96337266 + (CA)n Simple_repeat Simple_repeat 2 78 0 8 767 358 271 36 8 chr13 23947268 23947393 -96336919 + L1MD3 LINE L1 7884 7995 0 8 767 21 57 0 0 chr13 23947939 23947974 -96336338 + AT_rich Low_complexity Low_complexity 1 35 0 8 767 21 57 0 0 chr13 23947986 23948021 -96336291 + AT_rich Low_complexity Low_complexity 1 35 0 8 767 589 121 17 0 chr13 23948046 23948162 -96336150 - L1_Mus3 LINE L1 0 6638 6521 8 767 216 0 0 0 chr13 23949539 23949563 -96334749 + (TGGGGG)n Simple_repeat Simple_repeat 2 25 0 8 767 1796 241 19 21 chr13 23952260 23952680 -96331632 - MTD LTR MaLR 0 419 1 8 767 2580 293 89 106 chr13 23953674 23954363 -96329949 + Charlie12 DNA MER1_type 625 1298 -1575 8 767 5488 52 0 5 chr13 23954363 23955001 -96329311 - L1Md_F2 LINE L1 0 6582 5948 8 767 2580 293 89 106 chr13 23955001 23956543 -96327769 + Charlie12 DNA MER1_type 1299 2818 -55 8 767 419 235 73 63 chr13 23956616 23956807 -96327505 - MYSERV-int LTR ERVK -1459 5091 4963 8 767 258 81 0 0 chr13 23956815 23956852 -96327460 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 767 285 220 34 0 chr13 23957187 23957246 -96327066 - RLTR42-int LTR ERVK -3663 1859 1799 8 767 261 262 11 17 chr13 23957453 23957574 -96326738 + (TA)n Simple_repeat Simple_repeat 1 183 0 8 767 225 186 0 78 chr13 23957574 23957638 -96326674 + (CATA)n Simple_repeat Simple_repeat 2 60 0 8 767 195 129 0 0 chr13 23957656 23957687 -96326625 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 767 285 202 12 71 chr13 23957701 23957786 -96326526 - RLTR42-int LTR ERVK -5162 975 896 8 767 279 0 0 0 chr13 23959090 23959121 -96325191 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 767 345 164 0 0 chr13 23959324 23959397 -96324915 + GA-rich Low_complexity Low_complexity 2 74 0 8 767 561 287 90 0 chr13 23959612 23959779 -96324533 + B3A SINE B2 1 182 -16 8 767 863 259 46 23 chr13 23959819 23960036 -96324276 + ID_B1 SINE B4 3 224 0 8 767 2124 148 92 11 chr13 23960129 23960497 -96323815 + RMER10B LTR ERVL 1 398 0 8 767 204 170 43 0 chr13 23961096 23961143 -96323169 + CT-rich Low_complexity Low_complexity 2 50 0 8 767 381 306 58 29 chr13 23961143 23961281 -96323031 - B1F SINE Alu -6 143 2 8 767 287 236 11 27 chr13 23961618 23961808 -96322504 + GA-rich Low_complexity Low_complexity 1 186 0 8 767 330 248 45 25 chr13 23962662 23962819 -96321493 + (TATG)n Simple_repeat Simple_repeat 3 162 0 8 767 262 259 28 44 chr13 23962868 23963050 -96321262 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 8 767 211 309 19 32 chr13 23963037 23963194 -96321118 + (TG)n Simple_repeat Simple_repeat 2 156 0 8 767 310 247 22 54 chr13 23963128 23963312 -96321000 + (TATG)n Simple_repeat Simple_repeat 3 180 0 8 767 252 228 19 47 chr13 23963243 23963349 -96320963 + (TG)n Simple_repeat Simple_repeat 2 104 0 8 767 696 35 0 0 chr13 23963367 23963454 -96320858 + (TG)n Simple_repeat Simple_repeat 2 88 0 8 767 282 325 55 24 chr13 23963997 23964161 -96320151 - L1MCa LINE L1 -4691 1817 1649 8 767 291 375 104 30 chr13 23964705 23965040 -96319272 + MLT1E-int LTR MaLR 1108 1467 -22 8 767 247 239 45 0 chr13 23965050 23965117 -96319195 + MLT1E LTR MaLR 3 72 -552 8 767 274 295 30 83 chr13 23965121 23965254 -96319058 + MLT1E LTR MaLR 209 334 -319 8 767 379 247 118 32 chr13 23965288 23965548 -96318764 - L1ME1 LINE L1 -247 5932 5644 8 767 1061 244 35 63 chr13 23965611 23965895 -96318417 + B4A SINE B4 1 276 -16 8 767 318 278 72 0 chr13 23965963 23966060 -96318252 - L1M2 LINE L1 -1295 4848 4745 8 767 844 353 17 14 chr13 23966719 23967006 -96317306 + MTEa LTR MaLR 92 379 0 8 767 233 250 106 21 chr13 23967054 23967148 -96317164 + MER46C DNA MER2_type 236 337 -1 8 767 709 312 118 4 chr13 23967889 23968143 -96316169 + B4A SINE B4 2 284 -8 8 767 474 276 27 33 chr13 23968890 23969040 -96315272 - ORR1E LTR MaLR -207 152 4 8 767 1511 187 117 75 chr13 23969083 23969276 -96315036 - ORR1D1 LTR MaLR 0 374 163 8 767 288 0 0 0 chr13 23969276 23969308 -96315004 + (GA)n Simple_repeat Simple_repeat 1 32 0 8 767 1511 187 117 75 chr13 23969308 23969473 -96314839 - ORR1D1 LTR MaLR -212 162 1 8 767 189 0 0 0 chr13 23970729 23970750 -96313562 + (TC)n Simple_repeat Simple_repeat 2 22 0 8 767 1209 42 28 0 chr13 23970762 23970905 -96313407 - B1_Mus2 SINE Alu 0 147 1 8 767 293 333 0 11 chr13 23971168 23971259 -96313053 + B1F SINE Alu 9 98 -51 8 767 1244 89 0 6 chr13 23971279 23971460 -96312852 + (GGA)n Simple_repeat Simple_repeat 1 180 0 8 767 270 0 0 0 chr13 23972019 23972049 -96312263 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 8 767 262 257 42 14 chr13 23972053 23972124 -96312188 - ID4 SINE ID -9 74 2 8 767 1759 214 106 22 chr13 23972628 23973129 -96311183 - L1MA8 LINE L1 -12 6279 5737 8 767 279 0 0 0 chr13 23973254 23973285 -96311027 + (TC)n Simple_repeat Simple_repeat 2 32 0 8 767 387 0 0 0 chr13 23973285 23973327 -96310985 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 767 1339 287 95 81 chr13 23973327 23973685 -96310627 - L1MA8 LINE L1 -772 5371 5036 8 767 568 191 17 34 chr13 23973685 23973804 -96310508 - PB1D9 SINE Alu -3 117 1 8 767 1339 287 95 81 chr13 23973804 23974465 -96309847 - L1MA8 LINE L1 -1108 5035 4338 8 767 1324 151 53 21 chr13 23974536 23974820 -96309492 + Lx2 LINE L1 5957 6249 -748 8 767 227 209 56 69 chr13 23975153 23975225 -96309087 + MIR SINE MIR 111 181 -81 8 767 358 281 60 14 chr13 23975234 23975355 -96308957 + B1F2 SINE Alu 2 124 -25 8 767 183 258 78 31 chr13 23976031 23976095 -96308217 - L2b LINE L2 -103 3272 3206 8 767 1595 48 5 16 chr13 23976226 23976416 -96307896 + B2_Mm2 SINE B2 1 188 -7 8 767 195 69 0 0 chr13 23976722 23976751 -96307561 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 8 767 198 0 0 0 chr13 23977291 23977313 -96306999 + (CAAAAA)n Simple_repeat Simple_repeat 4 25 0 8 767 224 30 0 29 chr13 23977333 23977367 -96306945 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 8 767 531 248 71 8 chr13 23977925 23978051 -96306261 - RSINE1 SINE B4 -29 136 3 8 767 298 273 0 22 chr13 23978603 23978693 -96305619 + ORSL DNA Tip100 42 129 -146 8 767 615 27 0 0 chr13 23978693 23978766 -96305546 + (TC)n Simple_repeat Simple_repeat 2 74 0 8 767 261 180 0 0 chr13 23978766 23978816 -96305496 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 767 420 169 0 0 chr13 23979990 23980067 -96304245 + CT-rich Low_complexity Low_complexity 2 78 0 8 767 239 54 27 0 chr13 23980078 23980115 -96304197 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 767 556 239 80 29 chr13 23980520 23980658 -96303654 + RSINE1 SINE B4 4 148 -17 8 767 279 0 0 0 chr13 23980668 23980699 -96303613 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 767 748 279 74 10 chr13 23982019 23982222 -96302090 - B3 SINE B2 0 216 1 8 767 390 21 0 0 chr13 23982402 23982449 -96301863 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 767 365 299 50 55 chr13 23983276 23983478 -96300834 + L1M5 LINE L1 4477 4677 -1469 8 767 470 292 0 14 chr13 23983512 23983658 -96300654 - B1F1 SINE Alu 0 149 6 8 767 927 166 13 27 chr13 23983994 23984143 -96300169 + B1_Mus1 SINE Alu 2 148 0 8 767 224 219 0 0 chr13 23984147 23984188 -96300124 + GA-rich Low_complexity Low_complexity 1 41 0 8 767 181 244 22 0 chr13 23984714 23984759 -96299553 - L2 LINE L2 -1037 2382 2337 8 767 563 339 49 22 chr13 23985277 23985500 -96298812 - B4 SINE B4 -14 278 50 8 767 792 103 0 0 chr13 23985608 23985724 -96298588 + (GGAA)n Simple_repeat Simple_repeat 2 117 0 9 767 280 376 46 0 chr13 23985970 23986079 -96298233 - B4 SINE B4 -96 196 83 9 768 298 306 18 18 chr13 23986239 23986352 -96297960 - L1M4 LINE L1 -1938 4208 4096 9 768 569 191 9 9 chr13 23986388 23986494 -96297818 + B1_Mur4 SINE Alu 45 150 0 9 768 198 71 0 0 chr13 23987082 23987110 -96297202 + (CAGGG)n Simple_repeat Simple_repeat 1 28 0 9 768 210 156 22 0 chr13 23987830 23987845 -96296467 + (CAAA)n Simple_repeat Simple_repeat 3 18 0 9 768 805 232 151 0 chr13 23987845 23988030 -96296282 + B3 SINE B2 1 213 -3 9 768 210 156 22 0 chr13 23988030 23988059 -96296253 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 9 768 2942 178 73 15 chr13 23988255 23988842 -96295470 - RMER20B LTR ERVK 0 627 7 9 768 497 292 135 12 chr13 23988875 23989045 -96295267 + MTC LTR MaLR 10 200 -221 9 768 324 0 0 0 chr13 23991051 23991087 -96293225 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 768 23 0 0 0 chr13 23991566 23991589 -96292723 + AT_rich Low_complexity Low_complexity 1 23 0 9 768 357 280 18 61 chr13 23991915 23992029 -96292283 + MER81 DNA AcHobo 1 109 -5 9 768 951 302 30 61 chr13 23992913 23993209 -96291103 - B4 SINE B4 -4 288 2 9 768 207 0 0 0 chr13 23994098 23994121 -96290191 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 9 768 490 267 22 51 chr13 23994121 23994259 -96290053 - B1F2 SINE Alu -15 134 1 9 768 587 248 30 8 chr13 23994337 23994471 -96289841 + B1F SINE Alu 1 137 -12 9 768 30 59 0 0 chr13 23994529 23994580 -96289732 + AT_rich Low_complexity Low_complexity 1 51 0 9 768 396 0 0 0 chr13 23995589 23995633 -96288679 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 768 827 286 60 9 chr13 23995900 23996133 -96288179 - B4 SINE B4 -35 257 13 9 768 774 265 71 0 chr13 23996213 23996409 -96287903 - B3 SINE B2 -6 210 1 9 768 304 357 75 21 chr13 23996744 23996930 -96287382 + MIR SINE MIR 11 206 -56 9 768 311 269 83 0 chr13 23997575 23997683 -96286629 - PB1D10 SINE Alu 0 117 1 9 768 383 269 77 0 chr13 23997883 23997987 -96286325 + PB1D10 SINE Alu 5 116 -1 9 768 262 271 52 0 chr13 23998003 23998099 -96286213 + L1MC4 LINE L1 6649 6749 -1293 9 768 491 276 38 0 chr13 23999559 23999664 -96284648 - PB1D10 SINE Alu -6 111 3 9 768 270 130 42 42 chr13 24000347 24000419 -96283893 + T-rich Low_complexity Low_complexity 3 74 0 1 768 936 32 0 0 chr13 24001111 24001234 -96283078 + B1_Mus2 SINE Alu 1 123 -24 2 768 198 0 0 0 chr13 24001234 24001256 -96283056 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 768 271 295 28 28 chr13 24001901 24002009 -96282303 + Lx8 LINE L1 6480 6587 -886 4 768 731 264 134 15 chr13 24002014 24002276 -96282036 - ORR1D1 LTR MaLR 0 374 82 5 768 392 162 40 0 chr13 24002737 24002811 -96281501 - ORR1D1 LTR MaLR -289 81 5 5 768 1095 328 48 93 chr13 24002814 24003480 -96280832 + Lx8 LINE L1 6590 7225 -248 4 768 473 162 167 28 chr13 24003879 24003987 -96280325 + B3A SINE B2 17 139 -59 6 768 1182 74 0 0 chr13 24003988 24004246 -96280066 + (CA)n Simple_repeat Simple_repeat 1 258 0 7 768 207 0 0 0 chr13 24006335 24006358 -96277954 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 8 768 205 311 29 10 chr13 24006526 24006630 -96277682 + CT-rich Low_complexity Low_complexity 4 109 0 9 768 355 378 43 31 chr13 24007108 24007269 -96277043 - RSINE1 SINE B4 0 165 3 1 768 467 235 26 0 chr13 24008631 24008746 -96275566 + B1F SINE Alu 26 143 -6 1 768 311 254 30 0 chr13 24008746 24008813 -96275499 + ID4 SINE ID 2 70 -13 1 768 250 246 0 17 chr13 24008816 24008874 -96275438 + GA-rich Low_complexity Low_complexity 2 58 0 1 768 22 0 0 0 chr13 24009002 24009024 -96275288 + AT_rich Low_complexity Low_complexity 1 22 0 1 768 702 201 65 0 chr13 24009025 24009164 -96275148 + B1_Mur4 SINE Alu 2 149 -1 1 768 552 287 65 114 chr13 24009462 24009847 -96274465 + MLT1A LTR MaLR 5 370 -4 1 768 441 0 0 0 chr13 24009945 24009994 -96274318 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 768 236 333 0 14 chr13 24010014 24010084 -96274228 - B3A SINE B2 -73 125 57 1 768 221 293 27 0 chr13 24010182 24010257 -96274055 - MIR SINE MIR -22 240 164 1 768 222 274 0 0 chr13 24010447 24010498 -96273814 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 768 414 0 0 0 chr13 24010709 24010755 -96273557 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 768 524 280 19 13 chr13 24010755 24010910 -96273402 - B3A SINE B2 -31 162 4 2 768 865 68 0 0 chr13 24011042 24011160 -96273152 - B1_Mus1 SINE Alu 0 148 31 2 768 5690 78 16 34 chr13 24011165 24012103 -96272209 - L1_Mus1 LINE L1 -25 6613 5722 2 768 408 20 0 0 chr13 24012203 24012252 -96272060 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 768 1531 53 11 0 chr13 24012949 24013139 -96271173 - L1Md_F2 LINE L1 -689 5893 5702 2 768 4987 71 18 21 chr13 24013139 24013817 -96270495 + L1Md_F2 LINE L1 5907 6582 0 2 768 402 236 20 7 chr13 24013878 24014027 -96270285 + CT-rich Low_complexity Low_complexity 1 151 0 2 768 378 284 11 0 chr13 24014027 24014122 -96270190 - PB1D10 SINE Alu -15 102 7 2 768 279 0 0 0 chr13 24014679 24014710 -96269602 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 768 500 239 57 14 chr13 24014742 24014882 -96269430 + RSINE1 SINE B4 15 160 -5 3 768 27 0 0 0 chr13 24014905 24014932 -96269380 + AT_rich Low_complexity Low_complexity 1 27 0 3 768 522 292 7 35 chr13 24014961 24015103 -96269209 + RSINE1 SINE B4 3 140 -25 3 768 304 152 30 0 chr13 24015145 24015211 -96269101 + (TA)n Simple_repeat Simple_repeat 1 68 0 3 768 480 239 143 23 chr13 24016396 24016529 -96267783 - RSINE1 SINE B4 -15 150 2 3 768 591 142 16 8 chr13 24017176 24017226 -96267086 + polypurine Low_complexity Low_complexity 2 50 0 3 768 1003 120 17 0 chr13 24017226 24017401 -96266911 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 3 768 591 142 16 8 chr13 24017401 24017478 -96266834 + polypurine Low_complexity Low_complexity 51 128 0 3 768 627 340 86 25 chr13 24017494 24018004 -96266308 - MER63D DNA AcHobo -449 612 72 3 768 878 182 35 23 chr13 24018897 24019071 -96265241 + B2_Mm2 SINE B2 1 176 -19 3 768 2681 132 32 2 chr13 24019373 24019782 -96264530 - MTC LTR MaLR 0 421 1 4 768 243 103 0 0 chr13 24021814 24021853 -96262459 + (A)n Simple_repeat Simple_repeat 1 39 0 4 768 1808 157 38 6 chr13 24021854 24022169 -96262143 - MTC LTR MaLR -32 389 65 4 768 22 0 0 0 chr13 24023500 24023522 -96260790 + AT_rich Low_complexity Low_complexity 1 22 0 4 768 833 185 198 0 chr13 24024105 24024298 -96260014 + MTD LTR MaLR 154 388 -31 4 768 240 86 0 0 chr13 24024298 24024333 -96259979 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 768 833 185 198 0 chr13 24024333 24024361 -96259951 + MTD LTR MaLR 389 418 -1 4 768 837 207 117 104 chr13 24024502 24024809 -96259503 + ORR1C2 LTR MaLR 74 384 0 4 768 259 44 44 0 chr13 24024869 24024914 -96259398 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 768 381 353 15 8 chr13 24027203 24027337 -96256975 - B3A SINE B2 -62 136 2 4 768 3604 121 74 16 chr13 24027429 24028101 -96256211 - RMER6A LTR ERVK -45 711 1 4 768 186 43 0 0 chr13 24028991 24029014 -96255298 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 5 768 7649 83 14 40 chr13 24029039 24029611 -96254701 - Lx3C LINE L1 -8 6968 6403 5 768 513 0 0 0 chr13 24029611 24029668 -96254644 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 5 768 986 40 96 0 chr13 24029668 24029793 -96254519 - B1_Mm SINE Alu -10 137 1 5 768 7649 83 14 40 chr13 24029793 24030365 -96253947 - Lx3C LINE L1 -574 6402 5854 5 768 1662 230 82 46 chr13 24030482 24030983 -96253329 + ORR1D-int LTR MaLR 654 1172 -198 5 768 698 95 9 0 chr13 24031271 24031376 -96252936 + B2_Mm2 SINE B2 2 107 -88 5 768 3360 133 22 119 chr13 24031809 24032584 -96251728 + RMER6A LTR ERVK 57 756 0 5 768 265 257 28 14 chr13 24033032 24033103 -96251209 + GA-rich Low_complexity Low_complexity 4 75 0 5 768 235 254 15 0 chr13 24033385 24033452 -96250860 - ID4 SINE ID -12 71 4 5 768 405 221 45 39 chr13 24033802 24034060 -96250252 + (TG)n Simple_repeat Simple_repeat 1 259 0 5 768 27 29 0 0 chr13 24034394 24034428 -96249884 + AT_rich Low_complexity Low_complexity 1 34 0 6 768 2280 147 46 2 chr13 24034480 24034897 -96249415 - RMER10A LTR ERVL -6 436 2 6 768 563 282 21 0 chr13 24034897 24035039 -96249273 - B3 SINE B2 -67 149 5 6 768 268 208 0 40 chr13 24036073 24036148 -96248164 + GA-rich Low_complexity Low_complexity 2 73 0 6 768 2714 171 38 34 chr13 24036311 24036838 -96247474 + RLTR24 LTR ERV1 1 529 0 6 768 195 204 0 0 chr13 24036928 24036977 -96247335 + A-rich Low_complexity Low_complexity 4 52 0 6 768 883 201 52 33 chr13 24037646 24037857 -96246455 + B3 SINE B2 2 216 0 6 768 450 306 88 0 chr13 24037890 24038037 -96246275 + B3A SINE B2 1 160 -38 6 768 24 0 0 0 chr13 24038442 24038466 -96245846 + AT_rich Low_complexity Low_complexity 1 24 0 6 768 1210 234 102 15 chr13 24038563 24038897 -96245415 - ORR1D2 LTR MaLR -6 364 2 6 768 543 69 0 0 chr13 24039057 24039129 -96245183 + (TC)n Simple_repeat Simple_repeat 1 72 0 7 768 579 148 40 0 chr13 24039151 24039252 -96245060 - B1F SINE Alu -40 109 5 7 768 1197 205 137 29 chr13 24039539 24039881 -96244431 - MTD LTR MaLR -40 379 1 7 768 531 31 0 0 chr13 24040269 24040334 -96243978 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 768 186 43 0 0 chr13 24040334 24040356 -96243956 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 7 768 231 219 0 59 chr13 24040356 24040424 -96243888 + C-rich Low_complexity Low_complexity 5 68 0 7 768 198 71 0 0 chr13 24041280 24041308 -96243004 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 7 768 1246 48 0 0 chr13 24041308 24041455 -96242857 + B1_Mus1 SINE Alu 2 148 0 7 768 198 0 0 0 chr13 24041455 24041477 -96242835 + (A)n Simple_repeat Simple_repeat 1 22 0 7 768 485 268 11 32 chr13 24042089 24042274 -96242038 - HAL1-2a_MD LINE L1 -499 2525 2345 7 768 517 278 0 32 chr13 24042303 24042459 -96241853 - HAL1-2a_MD LINE L1 -529 2495 2345 8 768 528 266 62 25 chr13 24042873 24043035 -96241277 + B3A SINE B2 1 168 -30 8 768 656 182 0 8 chr13 24043038 24043305 -96241007 + CT-rich Low_complexity Low_complexity 1 264 0 8 768 397 188 0 0 chr13 24043640 24043704 -96240608 - ID4 SINE ID -16 67 4 8 768 343 217 34 13 chr13 24043724 24043819 -96240493 - PB1D10 SINE Alu -45 104 6 8 768 184 330 77 10 chr13 24044000 24044104 -96240208 + MIRc SINE MIR 47 157 -111 8 768 252 319 0 0 chr13 24044851 24044923 -96239389 - B3A SINE B2 -12 186 115 8 768 300 171 0 0 chr13 24044941 24045023 -96239289 + T-rich Low_complexity Low_complexity 3 84 0 8 768 290 239 0 14 chr13 24045025 24045097 -96239215 - B4 SINE B4 -74 218 148 8 768 324 0 0 0 chr13 24045163 24045199 -96239113 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 768 2046 83 86 0 chr13 24046246 24046547 -96237765 + ORR1A2 LTR MaLR 1 327 0 9 768 261 0 0 0 chr13 24046907 24046936 -96237376 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 9 768 261 0 0 0 chr13 24046986 24047015 -96237297 + (A)n Simple_repeat Simple_repeat 1 29 0 9 768 260 127 18 0 chr13 24047088 24047143 -96237169 + (CAAAA)n Simple_repeat Simple_repeat 2 57 0 9 768 205 382 35 17 chr13 24048003 24048176 -96236136 - MIR SINE MIR -43 219 44 9 768 247 304 0 0 chr13 24048646 24048715 -96235597 + ID4_ SINE ID 15 83 0 9 768 258 179 0 0 chr13 24048923 24048979 -96235333 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 768 405 0 0 0 chr13 24049008 24049053 -96235259 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 768 559 207 105 56 chr13 24049064 24049207 -96235105 - B3A SINE B2 -47 151 2 9 768 1529 157 16 90 chr13 24049794 24050116 -96234196 + ORR1B1 LTR MaLR 41 338 -56 9 768 1020 250 0 0 chr13 24052210 24052426 -96231886 - B3 SINE B2 0 216 1 9 768 1033 16 0 0 chr13 24052430 24052559 -96231753 - LTRIS_Mm LTR ERV1 0 482 354 1 768 216 0 0 0 chr13 24052667 24052691 -96231621 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 768 4202 97 10 5 chr13 24052691 24053285 -96231027 - Lx3A LINE L1 -13 6968 6372 1 768 980 249 69 60 chr13 24054219 24054569 -96229743 + ORR1E LTR MaLR 1 353 -6 1 768 296 284 58 10 chr13 24055078 24055181 -96229131 + PB1D10 SINE Alu 10 117 0 1 768 225 295 0 49 chr13 24055321 24055403 -96228909 + ID4_ SINE ID 5 82 -1 1 768 373 268 24 31 chr13 24055413 24055540 -96228772 + L1MB7 LINE L1 844 969 -5573 1 768 238 222 31 82 chr13 24055647 24055745 -96228567 + L1MB7 LINE L1 2611 2703 -3941 1 768 275 248 38 76 chr13 24055903 24056008 -96228304 + PB1D10 SINE Alu 16 116 -1 1 768 353 125 31 0 chr13 24056056 24056120 -96228192 + GA-rich Low_complexity Low_complexity 4 69 0 1 768 1129 233 42 55 chr13 24056151 24056511 -96227801 + ORR1E LTR MaLR 6 379 0 1 768 881 264 60 21 chr13 24056522 24056902 -96227410 + L1MB7 LINE L1 4873 5267 -1377 1 768 577 285 167 7 chr13 24056921 24057221 -96227091 + L1MB7 LINE L1 6077 6424 -258 1 768 206 225 0 0 chr13 24057245 24057285 -96227027 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 768 440 197 0 0 chr13 24058847 24058923 -96225389 - B1_Mur4 SINE Alu -71 79 4 1 768 348 308 75 71 chr13 24059314 24059542 -96224770 + B4 SINE B4 2 230 -62 1 768 1099 224 230 32 chr13 24059542 24060012 -96224300 + RMER15 LTR ERVL 1 563 -12 1 768 197 296 120 0 chr13 24060096 24060221 -96224091 - L2 LINE L2 -541 2878 2739 1 768 1427 59 21 5 chr13 24062215 24062401 -96221911 - B2_Mm2 SINE B2 -6 189 1 1 768 929 250 56 140 chr13 24063026 24063440 -96220872 + MTE2a LTR MaLR 1 379 0 1 768 220 317 37 0 chr13 24063537 24063619 -96220693 + L2a LINE L2 3336 3420 -6 1 768 214 288 74 12 chr13 24063705 24063786 -96220526 - L2c LINE L2 -233 3154 3069 1 768 576 274 50 20 chr13 24064530 24064731 -96219581 + B4 SINE B4 2 208 -84 1 768 414 0 0 0 chr13 24064786 24064832 -96219480 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 768 254 327 19 9 chr13 24066226 24066331 -96217981 + (TATATG)n Simple_repeat Simple_repeat 5 110 0 1 768 337 226 99 50 chr13 24066346 24066467 -96217845 - RSINE1 SINE B4 -36 129 3 1 768 237 132 0 0 chr13 24066558 24066596 -96217716 + (CATA)n Simple_repeat Simple_repeat 2 39 0 1 768 186 43 0 0 chr13 24066597 24066620 -96217692 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1 768 602 272 273 8 chr13 24066786 24067042 -96217270 - ORR1E LTR MaLR -35 324 1 1 768 385 305 27 17 chr13 24067718 24067857 -96216455 + PB1D10 SINE Alu 1 148 -1 1 768 1133 235 75 51 chr13 24068189 24068570 -96215742 + MTEa LTR MaLR 3 370 0 1 768 591 282 91 13 chr13 24069056 24069260 -96215052 + B4A SINE B4 1 223 -69 1 768 450 0 0 0 chr13 24069260 24069310 -96215002 + (CAGA)n Simple_repeat Simple_repeat 3 52 0 1 768 591 282 91 13 chr13 24069310 24069335 -96214977 + B4A SINE B4 224 248 -44 1 768 2361 77 6 3 chr13 24069353 24069690 -96214622 + ORR1A1 LTR MaLR 1 338 -8 1 768 484 287 0 17 chr13 24071118 24071235 -96213077 - PB1D7 SINE Alu 0 120 6 1 768 366 23 0 0 chr13 24071273 24071316 -96212996 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 768 271 348 35 9 chr13 24071918 24072034 -96212278 + B4A SINE B4 43 161 -131 1 768 339 119 0 0 chr13 24072159 24072226 -96212086 + (CAGA)n Simple_repeat Simple_repeat 4 70 0 1 768 225 260 20 0 chr13 24072421 24072471 -96211841 - ID2 SINE ID -5 78 28 1 768 366 61 0 0 chr13 24072512 24072561 -96211751 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 1 768 584 182 9 0 chr13 24072569 24072679 -96211633 - B1_Mus2 SINE Alu -35 112 2 1 768 462 248 37 0 chr13 24072898 24073007 -96211305 + ID_B1 SINE B4 104 216 -8 1 768 770 221 0 0 chr13 24073131 24073280 -96211032 - B1F SINE Alu 0 149 1 1 768 283 273 193 15 chr13 24074203 24074404 -96209908 + MER70B LTR ERVL 1 237 -341 1 768 306 234 0 0 chr13 24074794 24074864 -96209448 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 768 315 0 0 0 chr13 24074864 24074899 -96209413 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 768 548 215 0 19 chr13 24074899 24075108 -96209204 + (TG)n Simple_repeat Simple_repeat 1 204 0 1 768 576 226 123 0 chr13 24075711 24075866 -96208446 + RMER30 DNA MER1_type 7 180 -22 1 768 253 116 23 0 chr13 24076112 24076155 -96208157 + RMER15 LTR ERVL 16 59 -516 1 768 779 251 85 5 chr13 24076308 24076496 -96207816 + B3 SINE B2 1 203 -13 1 768 670 69 10 10 chr13 24076496 24076598 -96207714 + (TAAAA)n Simple_repeat Simple_repeat 2 103 0 1 768 360 241 46 9 chr13 24077665 24077774 -96206538 + Ricksha_c DNA MuDR 365 477 -1571 1 768 923 276 88 33 chr13 24077778 24078085 -96206227 + MTEa LTR MaLR 2 325 -54 1 768 2631 39 0 0 chr13 24078267 24078605 -96205707 + ORR1A1 LTR MaLR 1 338 -8 1 768 1277 20 0 0 chr13 24078974 24079121 -96205191 + B1_Mm SINE Alu 1 147 0 1 768 210 37 0 0 chr13 24079121 24079148 -96205164 + (A)n Simple_repeat Simple_repeat 1 27 0 1 768 486 96 0 0 chr13 24079602 24079675 -96204637 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 768 785 284 24 24 chr13 24079687 24079900 -96204412 - ID_B1 SINE B4 -9 215 3 1 768 510 61 0 0 chr13 24080314 24080380 -96203932 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 768 252 0 0 0 chr13 24080754 24080782 -96203530 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1 768 753 180 0 0 chr13 24081801 24081940 -96202372 - ID_B1 SINE B4 -9 215 81 1 768 524 300 69 0 chr13 24082034 24082194 -96202118 - B3A SINE B2 -25 173 3 1 768 465 19 0 0 chr13 24082309 24082363 -96201949 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 768 404 216 191 8 chr13 24083544 24083670 -96200642 + B1F1 SINE Alu 1 149 0 1 768 393 117 0 0 chr13 24083849 24083909 -96200403 + (T)n Simple_repeat Simple_repeat 1 60 0 1 768 238 333 65 0 chr13 24084286 24084424 -96199888 + MIRb SINE MIR 63 209 -59 1 768 256 217 42 28 chr13 24084498 24084569 -96199743 + L1MC3 LINE L1 7460 7531 -254 1 768 281 362 29 62 chr13 24084617 24084826 -96199486 + MIRb SINE MIR 38 239 -29 1 768 1753 146 0 169 chr13 24085020 24085499 -96198813 + RMER10B LTR ERVL 1 398 0 1 768 305 238 48 48 chr13 24085738 24085822 -96198490 - RSINE1 SINE B4 -81 84 1 1 768 263 98 0 0 chr13 24086067 24086108 -96198204 + RMER17C LTR ERVK 1 41 -369 1 768 583 188 0 45 chr13 24086111 24086245 -96198067 + RMER17C LTR ERVK 283 410 0 1 768 222 45 44 22 chr13 24086399 24086444 -96197868 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 1 768 257 263 94 139 chr13 24087869 24088156 -96196156 + B4 SINE B4 1 274 -18 1 768 201 121 0 0 chr13 24088654 24088687 -96195625 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 768 341 306 0 20 chr13 24088899 24088999 -96195313 - PB1D10 SINE Alu -2 115 18 1 768 537 58 0 0 chr13 24090708 24090777 -96193535 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 768 928 272 55 40 chr13 24090779 24091104 -96193208 + Lx8 LINE L1 7122 7451 -22 1 768 22 0 0 0 chr13 24091120 24091142 -96193170 + AT_rich Low_complexity Low_complexity 1 22 0 1 768 543 111 110 9 chr13 24091142 24091251 -96193061 - Lx3A LINE L1 -4 6977 6858 1 768 240 86 0 0 chr13 24091295 24091330 -96192982 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 768 441 314 83 22 chr13 24091571 24091933 -96192379 + L1MB8 LINE L1 5783 6166 -12 1 768 251 243 40 26 chr13 24092086 24092162 -96192150 - MER20B DNA MER1_type -298 485 409 1 768 228 309 34 76 chr13 24092498 24092617 -96191695 - MLT1A1 LTR MaLR 0 408 295 1 768 393 289 43 44 chr13 24093861 24094071 -96190241 + MIRb SINE MIR 12 231 -37 1 768 183 114 0 0 chr13 24094974 24095009 -96189303 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1 768 1185 48 0 13 chr13 24095009 24095158 -96189154 - B1_Mus2 SINE Alu 0 147 1 1 768 442 0 35 0 chr13 24095588 24095646 -96188666 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 768 421 141 50 0 chr13 24095650 24095771 -96188541 + CT-rich Low_complexity Low_complexity 5 131 0 1 768 303 281 155 17 chr13 24096296 24096412 -96187900 + MER74A LTR ERVL 4 135 -423 1 768 234 204 0 0 chr13 24096829 24096873 -96187439 + MER74A LTR ERVL 283 326 -232 1 768 541 285 123 82 chr13 24096876 24097216 -96187096 - ORR1E LTR MaLR -5 354 1 1 768 500 310 0 0 chr13 24097390 24097503 -96186809 - B1F1 SINE Alu -8 141 29 1 768 203 184 0 0 chr13 24098632 24098670 -96185642 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 1 768 516 257 37 0 chr13 24098922 24099058 -96185254 + B1F SINE Alu 2 142 -7 1 768 390 308 8 49 chr13 24099060 24099183 -96185129 + MER2 DNA MER2_type 226 343 -2 1 768 434 263 102 0 chr13 24100487 24100605 -96183707 - ID_B1 SINE B4 -11 213 84 1 768 384 22 0 0 chr13 24101990 24102035 -96182277 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 1 768 1234 35 0 0 chr13 24103098 24103239 -96181073 - B1_Mm SINE Alu -6 141 1 1 768 25 31 0 0 chr13 24104722 24104754 -96179558 + AT_rich Low_complexity Low_complexity 1 32 0 1 768 182 37 37 0 chr13 24106610 24106637 -96177675 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 768 337 210 186 20 chr13 24106651 24106753 -96177559 - B3A SINE B2 -79 119 1 1 768 1136 64 118 39 chr13 24108520 24108698 -96175614 - B2_Mm2 SINE B2 -3 192 1 1 768 423 280 102 0 chr13 24108778 24108896 -96175416 - ID_B1 SINE B4 -5 219 90 1 768 684 210 27 34 chr13 24113512 24113660 -96170652 + B1F1 SINE Alu 2 148 -1 1 768 506 183 21 0 chr13 24115249 24115342 -96168970 - B1F SINE Alu -20 129 35 2 769 317 24 24 0 chr13 24117285 24117327 -96166985 + (CAAT)n Simple_repeat Simple_repeat 1 43 0 2 769 459 0 0 0 chr13 24117428 24117479 -96166833 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 769 566 250 22 15 chr13 24118056 24118190 -96166122 - B1F SINE Alu 0 149 15 2 769 428 271 150 0 chr13 24118224 24118364 -96165948 + RSINE1 SINE B4 5 165 0 2 769 522 271 0 20 chr13 24118825 24118972 -96165340 + B1F SINE Alu 6 149 0 2 769 36149 35 0 0 chr13 24120200 24125791 -96158521 + L1Md_T LINE L1 1 5589 -297 2 769 9069 10 0 0 chr13 24125791 24126787 -96157525 + L1Md_T LINE L1 5590 6585 0 2 769 277 239 60 0 chr13 24127014 24127081 -96157231 - tRNA-Ala-GCG tRNA tRNA 0 75 5 2 769 316 259 0 0 chr13 24127556 24127637 -96156675 + B1F SINE Alu 68 148 -1 2 769 781 204 30 59 chr13 24127757 24127960 -96156352 - B3 SINE B2 -11 205 9 2 769 502 256 31 8 chr13 24128949 24129079 -96155233 + ID_B1 SINE B4 91 223 -1 2 769 207 0 0 0 chr13 24129143 24129166 -96155146 + (A)n Simple_repeat Simple_repeat 1 23 0 2 769 182 62 31 0 chr13 24129170 24129202 -96155110 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 2 769 452 313 167 27 chr13 24129866 24130082 -96154230 + HAL1 LINE L1 1227 1460 -1047 2 769 297 0 0 0 chr13 24130082 24130115 -96154197 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2 769 452 313 167 27 chr13 24130115 24130420 -96153892 + HAL1 LINE L1 1461 1820 -687 2 769 282 153 0 53 chr13 24130749 24130825 -96153487 + GA-rich Low_complexity Low_complexity 6 77 0 2 769 207 0 0 0 chr13 24131007 24131030 -96153282 + (T)n Simple_repeat Simple_repeat 1 23 0 2 769 432 292 29 0 chr13 24131552 24131689 -96152623 + B1F SINE Alu 9 149 0 2 769 243 0 0 0 chr13 24132065 24132092 -96152220 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 769 618 223 40 61 chr13 24132540 24132688 -96151624 - B1F SINE Alu 0 149 5 2 769 905 252 119 19 chr13 24132776 24133095 -96151217 - MTE2b LTR MaLR -2 377 27 2 769 262 353 10 10 chr13 24133319 24133422 -96150890 - MER5A DNA MER1_type -75 114 12 2 769 365 190 116 79 chr13 24133915 24134038 -96150274 - B1F1 SINE Alu -8 139 11 2 769 180 339 0 0 chr13 24135205 24135261 -96149051 - L2b LINE L2 -213 3162 3107 2 769 645 192 0 16 chr13 24135395 24135517 -96148795 - PB1D9 SINE Alu 0 120 1 2 769 227 256 94 62 chr13 24135764 24135860 -96148452 - B4 SINE B4 0 292 194 2 769 361 270 67 48 chr13 24135897 24136002 -96148310 + ORR1E LTR MaLR 1 107 -252 2 769 417 212 26 34 chr13 24136302 24136419 -96147893 + PB1D10 SINE Alu 2 117 0 2 769 235 215 25 12 chr13 24136427 24136507 -96147805 + GA-rich Low_complexity Low_complexity 3 83 0 2 769 715 170 42 14 chr13 24136593 24136736 -96147576 - B1F SINE Alu -1 148 2 2 769 614 218 0 0 chr13 24137959 24138069 -96146243 - PB1D10 SINE Alu -7 110 1 2 769 284 307 158 0 chr13 24138572 24138686 -96145626 + ID_B1 SINE B4 83 214 -10 2 769 237 132 0 0 chr13 24138843 24138881 -96145431 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 769 1860 163 43 9 chr13 24139092 24139439 -96144873 + RLTR15 LTR ERVK 1 359 0 2 769 216 0 0 0 chr13 24139650 24139674 -96144638 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 2 769 672 156 90 0 chr13 24139674 24139796 -96144516 - B1_Mur3 SINE Alu -8 141 9 2 769 361 198 57 23 chr13 24139985 24140073 -96144239 + PB1D7 SINE Alu 30 120 0 2 769 537 16 0 0 chr13 24142468 24142530 -96141782 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 769 180 0 0 0 chr13 24142638 24142658 -96141654 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 769 180 286 0 0 chr13 24143173 24143222 -96141090 + MIRb SINE MIR 179 227 -41 2 769 222 37 0 0 chr13 24143346 24143373 -96140939 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 769 1357 205 156 24 chr13 24143977 24144317 -96139995 + MTD LTR MaLR 29 413 -6 2 769 444 218 35 26 chr13 24145032 24145145 -96139167 - B1_Mur2 SINE Alu -7 142 29 2 769 224 221 64 47 chr13 24145524 24145633 -96138679 + ID4 SINE ID 16 114 -38 2 769 1193 186 101 22 chr13 24145908 24146226 -96138086 + RMER17C LTR ERVK 1 343 -67 2 769 685 264 7 0 chr13 24146342 24146490 -96137822 - RSINE1 SINE B4 -9 156 8 2 769 525 233 0 0 chr13 24146692 24146808 -96137504 - ID_B1 SINE B4 0 224 109 2 769 333 331 118 27 chr13 24147012 24147539 -96136773 - L1MC4 LINE L1 -539 7503 6929 2 769 479 277 14 7 chr13 24148430 24148568 -96135744 - ID_B1 SINE B4 0 224 86 2 769 377 267 9 38 chr13 24148939 24149044 -96135268 + RSINE1 SINE B4 4 105 -60 2 769 388 150 25 0 chr13 24149074 24149154 -96135158 + GA-rich Low_complexity Low_complexity 1 82 0 2 769 360 43 0 0 chr13 24149158 24149204 -96135108 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 769 198 83 39 59 chr13 24149477 24149528 -96134784 + (TATATG)n Simple_repeat Simple_repeat 6 55 0 2 769 770 232 77 142 chr13 24149550 24149861 -96134451 - B4A SINE B4 0 292 2 2 769 289 321 0 138 chr13 24149961 24150113 -96134199 - B1F SINE Alu -1 148 18 2 769 227 103 26 0 chr13 24150152 24150191 -96134121 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 769 502 223 16 16 chr13 24150216 24150339 -96133973 - ID_B1 SINE B4 -21 203 81 2 769 965 245 72 8 chr13 24151619 24151882 -96132430 - B4A SINE B4 -12 280 1 2 769 230 273 30 0 chr13 24152143 24152209 -96132103 - ID4_ SINE ID -13 70 3 2 769 369 202 69 29 chr13 24152687 24152789 -96131523 - PB1D10 SINE Alu -2 115 10 2 769 295 291 65 27 chr13 24153014 24153137 -96131175 + PB1D10 SINE Alu 6 137 -12 2 769 393 274 236 14 chr13 24153444 24153678 -96130634 + B4A SINE B4 1 290 -2 2 769 246 276 80 20 chr13 24153748 24153848 -96130464 + ID_B1 SINE B4 89 194 -30 2 769 4583 66 0 30 chr13 24153941 24154551 -96129761 + L1Md_F2 LINE L1 5991 6582 0 2 769 783 32 0 0 chr13 24155090 24155184 -96129128 + (TG)n Simple_repeat Simple_repeat 2 95 0 2 769 425 274 162 0 chr13 24155210 24155327 -96128985 - B3A SINE B2 -55 143 8 2 769 273 55 17 52 chr13 24155339 24155397 -96128915 + (TTTTTG)n Simple_repeat Simple_repeat 2 57 0 2 769 753 156 35 28 chr13 24155401 24155546 -96128766 - B1_Mur3 SINE Alu 0 149 4 2 769 277 280 113 8 chr13 24155550 24155683 -96128629 + ID_B1 SINE B4 76 222 -2 2 769 354 312 84 23 chr13 24155740 24155871 -96128441 + B1F SINE Alu 10 148 -1 2 769 25 0 0 0 chr13 24157017 24157042 -96127270 + AT_rich Low_complexity Low_complexity 1 25 0 2 769 690 259 11 21 chr13 24157634 24157823 -96126489 + MTEa LTR MaLR 193 379 0 2 769 300 167 0 0 chr13 24158009 24158063 -96126249 + B1_Mur1 SINE Alu 91 144 -5 2 769 279 276 143 0 chr13 24158424 24158522 -96125790 + ID_B1 SINE B4 82 193 -31 2 769 228 67 0 0 chr13 24158522 24158552 -96125760 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 2 769 335 242 81 0 chr13 24158592 24158691 -96125621 + PB1D7 SINE Alu 6 112 -8 2 769 421 275 18 0 chr13 24160187 24160296 -96124016 + PB1D7 SINE Alu 1 111 -9 2 769 207 0 0 0 chr13 24160296 24160319 -96123993 + (GGA)n Simple_repeat Simple_repeat 3 25 0 2 769 417 221 57 19 chr13 24160968 24161074 -96123238 + B1F SINE Alu 35 144 -5 2 769 225 0 0 0 chr13 24161075 24161100 -96123212 + (CAAAC)n Simple_repeat Simple_repeat 1 25 0 2 769 260 287 48 60 chr13 24162625 24162774 -96121538 - MIR SINE MIR -103 165 16 2 769 280 299 7 7 chr13 24163039 24163194 -96121118 + A-rich Low_complexity Low_complexity 2 156 0 2 769 269 329 0 0 chr13 24164321 24164403 -96119909 + ID4_ SINE ID 2 83 0 2 769 249 331 99 63 chr13 24166312 24166454 -96117858 - MER21B LTR ERV1 -122 741 595 2 769 4561 183 62 10 chr13 24166468 24167407 -96116905 + Lx2B LINE L1 6013 7000 0 2 769 776 243 15 19 chr13 24168165 24168371 -96115941 + ID_B1 SINE B4 4 208 -16 2 769 279 308 13 13 chr13 24168866 24168945 -96115367 + ID_B1 SINE B4 135 213 -11 2 769 463 282 55 27 chr13 24168974 24169120 -96115192 + RSINE1 SINE B4 9 158 -7 2 769 213 358 33 107 chr13 24169382 24169504 -96114808 + ID_B1 SINE B4 23 135 -89 2 769 753 239 69 137 chr13 24170615 24170994 -96113318 + MTE2b LTR MaLR 26 378 -1 2 769 391 149 11 22 chr13 24172500 24172589 -96111723 + T-rich Low_complexity Low_complexity 4 91 0 2 769 429 262 161 3 chr13 24172761 24172929 -96111383 + B3A SINE B2 4 196 -2 2 769 265 266 101 50 chr13 24173328 24173447 -96110865 - ID_B1 SINE B4 -8 216 92 2 769 300 27 0 0 chr13 24174087 24174124 -96110188 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 769 206 197 0 32 chr13 24174382 24174445 -96109867 + GA-rich Low_complexity Low_complexity 4 64 0 2 769 569 261 14 7 chr13 24174759 24174902 -96109410 + B1F SINE Alu 1 144 -5 2 769 476 276 24 24 chr13 24174929 24175055 -96109257 + ID_B1 SINE B4 1 126 -98 2 769 1034 266 78 6 chr13 24175069 24175390 -96108922 + MTE2a LTR MaLR 36 379 0 2 769 522 43 0 0 chr13 24175432 24175501 -96108811 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 769 335 98 0 0 chr13 24175501 24175552 -96108760 + ORR1B2 LTR MaLR 1 51 -316 2 769 319 70 0 0 chr13 24175553 24175596 -96108716 + ORR1B2 LTR MaLR 316 358 -9 2 769 423 0 0 0 chr13 24175596 24175643 -96108669 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 769 266 288 41 0 chr13 24176461 24176534 -96107778 - B4 SINE B4 -3 289 214 3 769 392 265 20 0 chr13 24176599 24176697 -96107615 - B4 SINE B4 -191 101 2 3 769 23 68 0 0 chr13 24177016 24177060 -96107252 + AT_rich Low_complexity Low_complexity 1 44 0 3 769 521 271 15 15 chr13 24177291 24177426 -96106886 - ID_B1 SINE B4 -14 210 76 3 769 246 313 0 0 chr13 24178543 24178610 -96105702 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 3 769 306 0 0 0 chr13 24178672 24178706 -96105606 + (TTTG)n Simple_repeat Simple_repeat 1 34 0 3 769 311 192 0 0 chr13 24178710 24178762 -96105550 - PB1D7 SINE Alu -17 103 52 3 769 1237 246 19 48 chr13 24179005 24179381 -96104931 + ORR1D2 LTR MaLR 2 366 -4 3 769 306 192 154 0 chr13 24180136 24180214 -96104098 + ID_B1 SINE B4 134 223 -1 3 769 1944 77 55 0 chr13 24180374 24180647 -96103665 + L1_Mus3 LINE L1 6351 6638 0 3 769 386 262 83 0 chr13 24181093 24181177 -96103135 + B1_Mur3 SINE Alu 1 91 -58 3 769 481 241 54 0 chr13 24181254 24181366 -96102946 + B1F1 SINE Alu 13 130 -19 3 769 276 30 0 0 chr13 24181373 24181406 -96102906 + (CAAAA)n Simple_repeat Simple_repeat 5 37 0 3 769 342 152 0 0 chr13 24182087 24182146 -96102166 + A-rich Low_complexity Low_complexity 1 59 0 3 769 339 262 47 28 chr13 24182748 24182854 -96101458 + B1F2 SINE Alu 1 108 -9 3 769 533 229 18 0 chr13 24182955 24183064 -96101248 + PB1D9 SINE Alu 1 111 -9 3 769 243 0 0 0 chr13 24183064 24183091 -96101221 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 769 258 305 63 67 chr13 24183426 24183665 -96100647 + MER65D LTR ERV1 55 292 -181 3 769 300 308 0 88 chr13 24184612 24184726 -96099586 - Charlie12 DNA MER1_type -2768 105 2 3 769 425 160 20 0 chr13 24184814 24184914 -96099398 + CT-rich Low_complexity Low_complexity 1 102 0 3 769 337 268 14 0 chr13 24184914 24184985 -96099327 - ID4_ SINE ID -11 72 1 3 769 242 333 126 12 chr13 24186793 24186960 -96097352 - MIR SINE MIR -10 252 67 3 769 426 39 0 0 chr13 24186967 24187019 -96097293 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 769 414 278 60 9 chr13 24187020 24187136 -96097176 + ID_B1 SINE B4 99 220 -4 3 769 325 274 98 0 chr13 24187855 24187957 -96096355 + PB1D7 SINE Alu 1 112 -8 3 769 369 0 0 0 chr13 24188275 24188316 -96095996 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 3 769 509 265 44 0 chr13 24190338 24190474 -96093838 + RSINE1 SINE B4 11 152 -13 3 769 273 254 42 0 chr13 24191786 24191857 -96092455 + ID4 SINE ID 7 80 -3 3 769 432 358 66 17 chr13 24192589 24192876 -96091436 - MER2 DNA MER2_type -24 321 21 3 769 507 33 0 0 chr13 24193065 24193126 -96091186 + (TG)n Simple_repeat Simple_repeat 1 61 0 3 769 180 0 0 0 chr13 24193991 24194011 -96090301 + (CAG)n Simple_repeat Simple_repeat 2 21 0 3 769 276 272 28 46 chr13 24194382 24194490 -96089822 + PB1D7 SINE Alu 9 114 -6 3 769 339 288 107 33 chr13 24194533 24194655 -96089657 + B1F2 SINE Alu 11 141 -8 3 769 340 235 0 24 chr13 24194875 24194958 -96089354 + ID_B1 SINE B4 138 218 -6 3 769 342 67 0 0 chr13 24196658 24196703 -96087609 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 769 405 0 0 0 chr13 24196754 24196799 -96087513 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 769 333 68 0 0 chr13 24196853 24196897 -96087415 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 769 369 0 0 0 chr13 24196949 24196990 -96087322 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 769 964 273 70 3 chr13 24197045 24197372 -96086940 + MTEa LTR MaLR 31 379 0 3 769 320 77 0 119 chr13 24198320 24198379 -96085933 + HAL1-3A_ME LINE L1 1974 2025 -833 3 769 332 274 42 0 chr13 24199086 24199181 -96085131 + RSINE1 SINE B4 16 114 -51 3 769 390 21 0 0 chr13 24199191 24199238 -96085074 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 769 366 61 0 0 chr13 24199818 24199867 -96084445 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 769 370 259 12 0 chr13 24200816 24200897 -96083415 - ID4_ SINE ID -1 82 1 3 769 530 273 16 0 chr13 24200900 24201021 -96083291 - ID_B1 SINE B4 -8 216 94 3 769 269 372 0 0 chr13 24201035 24201129 -96083183 - ID_B1 SINE B4 -48 176 83 3 769 447 281 57 8 chr13 24202617 24202739 -96081573 - ID_B1 SINE B4 -6 218 91 3 769 258 246 0 32 chr13 24203463 24203526 -96080786 + B4A SINE B4 85 145 -147 3 769 443 188 51 20 chr13 24203483 24203581 -96080731 + PB1D7 SINE Alu 18 118 -2 3 769 673 236 82 34 chr13 24205271 24205477 -96078835 - B3 SINE B2 0 216 1 3 769 610 190 1 0 chr13 24205486 24205616 -96078696 - B1F SINE Alu -8 141 11 3 769 315 0 0 0 chr13 24205792 24205827 -96078485 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 769 2232 153 29 5 chr13 24205916 24206297 -96078015 + ORR1B1 LTR MaLR 5 394 0 3 769 858 152 30 24 chr13 24206534 24206702 -96077610 - B2_Mm2 SINE B2 -26 169 1 3 769 342 0 0 0 chr13 24206707 24206745 -96077567 + (CAAT)n Simple_repeat Simple_repeat 4 41 0 3 769 204 163 0 0 chr13 24206745 24206788 -96077524 + CT-rich Low_complexity Low_complexity 2 44 0 3 769 290 289 0 67 chr13 24206953 24207057 -96077255 + B1F SINE Alu 14 110 -39 3 769 310 127 28 0 chr13 24207854 24207925 -96076387 + (TA)n Simple_repeat Simple_repeat 1 73 0 3 769 588 250 0 0 chr13 24208270 24208430 -96075882 + A-rich Low_complexity Low_complexity 1 160 0 3 769 233 228 0 17 chr13 24208500 24208558 -96075754 + MER2 DNA MER2_type 88 144 -201 3 769 537 44 0 0 chr13 24208560 24208628 -96075684 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 769 549 326 45 53 chr13 24208756 24208999 -96075313 - B4 SINE B4 -51 241 1 3 769 696 155 203 104 chr13 24210236 24210438 -96073874 + URR1B DNA MER1_type 4 225 0 3 769 384 250 0 0 chr13 24210495 24210575 -96073737 + B1F SINE Alu 4 83 -66 3 769 4210 74 6 2 chr13 24210575 24211115 -96073197 + L1_Mus1 LINE L1 6026 6567 0 3 769 234 254 0 40 chr13 24212216 24212290 -96072022 + (ATGGTG)n Simple_repeat Simple_repeat 2 72 0 3 769 472 276 29 19 chr13 24212316 24212633 -96071679 + (ATGGTG)n Simple_repeat Simple_repeat 1 320 0 3 769 376 307 80 70 chr13 24214041 24214328 -96069984 + B4 SINE B4 3 292 0 3 769 280 101 58 0 chr13 24214559 24214628 -96069684 + (TCTG)n Simple_repeat Simple_repeat 4 76 0 3 769 2055 279 144 48 chr13 24215085 24216253 -96068059 + Lx9 LINE L1 6363 7642 -2 3 769 25 0 0 0 chr13 24216367 24216392 -96067920 + AT_rich Low_complexity Low_complexity 1 25 0 3 769 355 209 0 0 chr13 24217177 24217244 -96067068 - tRNA-Ala-GCY_ tRNA tRNA -8 67 1 3 769 570 211 17 9 chr13 24217927 24218042 -96066270 + PB1D10 SINE Alu 1 116 -1 3 769 218 347 10 10 chr13 24218765 24218861 -96065451 - PB1D10 SINE Alu -21 96 1 3 769 243 342 0 0 chr13 24218785 24218864 -96065448 - ID_B1 SINE B4 -67 157 79 3 769 207 243 0 0 chr13 24219035 24219072 -96065240 + G-rich Low_complexity Low_complexity 4 40 0 3 769 1385 77 0 30 chr13 24219485 24219685 -96064627 + B2_Mm2 SINE B2 2 195 0 3 769 654 193 158 11 chr13 24220329 24220512 -96063800 + B3 SINE B2 2 211 -5 3 769 312 303 129 26 chr13 24220633 24220767 -96063545 + B1F1 SINE Alu 1 120 -29 3 769 193 339 25 33 chr13 24221577 24221699 -96062613 - MIR SINE MIR -43 219 99 3 769 4254 19 0 2 chr13 24221823 24222298 -96062014 - MERVL-int LTR ERVL -2450 3035 2562 3 769 3060 296 72 26 chr13 24223416 24224629 -96059683 - MERVL-int LTR ERVL -3635 1364 96 3 769 400 290 28 9 chr13 24225170 24225278 -96059034 + PB1D10 SINE Alu 5 114 -3 3 769 235 235 25 18 chr13 24225438 24225508 -96058804 + B1F SINE Alu 6 77 -43 3 769 689 63 11 0 chr13 24225513 24225608 -96058704 + (TCTCCC)n Simple_repeat Simple_repeat 5 100 0 3 769 771 169 0 0 chr13 24226473 24226797 -96057515 + (TG)n Simple_repeat Simple_repeat 1 324 0 3 769 487 274 59 100 chr13 24226848 24226934 -96057378 - L1M3 LINE L1 -516 5664 5583 3 769 724 171 49 21 chr13 24226934 24227077 -96057235 + B1_Mus2 SINE Alu 1 147 0 3 769 487 274 59 100 chr13 24227077 24227261 -96057051 - L1M3 LINE L1 -598 5582 5405 3 769 299 203 122 0 chr13 24227979 24228053 -96056259 - ID4_ SINE ID 0 83 1 3 769 253 357 10 0 chr13 24228358 24228456 -96055856 + PB1D10 SINE Alu 14 112 -5 3 769 532 299 32 45 chr13 24229238 24229459 -96054853 + ORR1E LTR MaLR 49 266 -93 3 769 208 143 0 0 chr13 24229588 24229623 -96054689 + (T)n Simple_repeat Simple_repeat 1 35 0 3 769 2129 110 3 0 chr13 24230256 24230574 -96053738 + ORR1A2 LTR MaLR 1 319 -8 3 769 389 288 0 43 chr13 24230613 24230729 -96053583 + ORR1E LTR MaLR 1 111 -248 3 769 250 224 36 109 chr13 24230885 24230995 -96053317 + ORR1E LTR MaLR 258 359 -20 3 769 800 321 47 15 chr13 24231480 24231821 -96052491 + MLT1A0 LTR MaLR 1 352 -13 3 769 201 191 64 0 chr13 24232004 24232051 -96052261 - MIRb SINE MIR -28 240 191 3 769 678 140 0 0 chr13 24232309 24232423 -96051889 + (TCC)n Simple_repeat Simple_repeat 2 115 0 3 769 387 288 8 17 chr13 24233680 24233800 -96050512 + ID_B1 SINE B4 105 223 -1 3 769 286 306 26 61 chr13 24234032 24234147 -96050165 - B4A SINE B4 -169 123 13 3 769 526 303 5 15 chr13 24235449 24235647 -96048665 - L1MA4 LINE L1 -384 5916 5721 3 769 185 178 22 0 chr13 24235647 24235692 -96048620 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 3 769 383 243 43 35 chr13 24235943 24236058 -96048254 + ID_B1 SINE B4 79 194 -30 3 769 444 316 48 11 chr13 24236795 24236984 -96047328 + L1MC LINE L1 5105 5300 -846 3 769 346 140 213 11 chr13 24236993 24237087 -96047225 + B4A SINE B4 1 113 -179 3 769 782 154 72 30 chr13 24237179 24237346 -96046966 + B2_Mm2 SINE B2 1 174 -21 3 769 24 67 0 0 chr13 24237346 24237391 -96046921 + AT_rich Low_complexity Low_complexity 1 45 0 4 769 327 325 111 39 chr13 24237499 24237858 -96046454 + L1MD LINE L1 5298 5682 -560 4 769 383 300 92 13 chr13 24237910 24238062 -96046250 + MLT1G3 LTR MaLR 170 333 -262 4 769 624 38 0 0 chr13 24238294 24238373 -96045939 + (TG)n Simple_repeat Simple_repeat 1 79 0 4 769 915 273 95 29 chr13 24238526 24238857 -96045455 + MTD LTR MaLR 1 353 -6 4 769 261 275 79 20 chr13 24239067 24239219 -96045093 + L1M5 LINE L1 5678 5838 -402 4 769 762 232 169 25 chr13 24239753 24239996 -96044316 + MTEb LTR MaLR 13 290 -89 4 769 502 260 16 8 chr13 24239992 24240120 -96044192 + B4A SINE B4 164 292 0 4 769 181 0 33 33 chr13 24240189 24240219 -96044093 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 769 460 254 48 24 chr13 24240224 24240349 -96043963 + B4A SINE B4 8 135 -157 4 769 386 236 54 18 chr13 24240404 24240516 -96043796 - B1F1 SINE Alu -1 116 1 4 769 551 215 260 0 chr13 24240867 24241044 -96043268 - ID_B1 SINE B4 0 224 2 4 769 224 250 0 0 chr13 24241142 24241190 -96043122 + Alu SINE Alu 34 81 -94 4 769 291 28 0 0 chr13 24241234 24241270 -96043042 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 769 222 37 0 0 chr13 24241280 24241307 -96043005 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 4 769 321 278 70 30 chr13 24241324 24241424 -96042888 + PB1D10 SINE Alu 13 116 -1 4 769 393 393 18 18 chr13 24241934 24242157 -96042155 + B4A SINE B4 68 290 -2 4 769 683 278 51 5 chr13 24242227 24242422 -96041890 + ID_B1 SINE B4 12 215 -9 4 769 428 325 12 43 chr13 24242609 24242773 -96041539 + RSINE1 SINE B4 3 161 -4 4 769 432 0 0 0 chr13 24243129 24243177 -96041135 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 769 688 208 27 14 chr13 24244273 24244419 -96039893 - B1_Mur2 SINE Alu 0 149 2 4 769 225 329 119 26 chr13 24245006 24245309 -96039003 + Charlie1a DNA MER1_type 254 584 -871 4 769 888 264 58 119 chr13 24245399 24245794 -96038518 + MTE2a LTR MaLR 1 371 -8 4 769 303 330 135 16 chr13 24245801 24245986 -96038326 - B4 SINE B4 -81 211 5 4 769 504 288 70 6 chr13 24246142 24246313 -96037999 - B3A SINE B2 -16 182 1 4 769 349 302 56 21 chr13 24247592 24247734 -96036578 + ID_B1 SINE B4 1 147 -77 4 769 369 356 5 8 chr13 24247740 24248298 -96036014 + GA-rich Low_complexity Low_complexity 1 556 0 4 770 270 73 0 0 chr13 24248349 24248390 -96035922 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 4 770 492 291 0 16 chr13 24248630 24248759 -96035553 + ID_B1 SINE B4 86 212 -12 4 770 234 298 47 19 chr13 24249236 24249342 -96034970 + MLT1C LTR MaLR 356 464 -3 4 770 380 55 18 0 chr13 24250140 24250195 -96034117 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 770 507 242 31 31 chr13 24250210 24250338 -96033974 - RSINE1 SINE B4 -36 129 2 4 770 931 133 7 7 chr13 24250467 24250611 -96033701 - B1_Mus1 SINE Alu 0 148 5 4 770 306 206 48 58 chr13 24250989 24251092 -96033220 - PB1D10 SINE Alu 0 117 16 4 770 275 0 0 28 chr13 24252207 24252243 -96032069 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 770 1207 102 36 36 chr13 24252259 24252453 -96031859 + B2_Mm2 SINE B2 2 195 0 4 770 1263 227 31 6 chr13 24252510 24252834 -96031478 + RMER19C LTR ERVK 1 332 -279 4 770 963 154 5 32 chr13 24252809 24252997 -96031315 + RMER19C LTR ERVK 720 902 0 4 770 237 215 14 97 chr13 24253061 24253133 -96031179 + PB1D10 SINE Alu 32 97 -20 4 770 215 312 0 59 chr13 24253133 24253235 -96031077 + GA-rich Low_complexity Low_complexity 3 98 0 4 770 240 111 0 0 chr13 24253235 24253271 -96031041 + (GGGA)n Simple_repeat Simple_repeat 1 36 0 4 770 202 175 52 17 chr13 24253696 24253754 -96030558 + T-rich Low_complexity Low_complexity 5 64 0 4 770 853 211 106 45 chr13 24253764 24253807 -96030505 - B3 SINE B2 -4 212 179 4 770 378 0 0 0 chr13 24253807 24253849 -96030463 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 770 853 211 106 45 chr13 24253849 24254004 -96030308 - B3 SINE B2 -38 178 3 4 770 313 238 82 12 chr13 24256090 24256175 -96028137 + B1F SINE Alu 8 98 -51 4 770 226 311 11 43 chr13 24256217 24256311 -96028001 + GA-rich Low_complexity Low_complexity 3 93 0 4 770 418 227 6 11 chr13 24256384 24256558 -96027754 + (TGG)n Simple_repeat Simple_repeat 3 175 0 4 770 440 261 58 22 chr13 24256876 24257063 -96027249 + Lx7 LINE L1 5505 5709 -1987 4 770 564 292 18 61 chr13 24257074 24257339 -96026973 + MTD LTR MaLR 10 231 -148 4 770 578 244 0 7 chr13 24258269 24258405 -96025907 + B1F1 SINE Alu 10 144 -5 4 770 624 89 108 0 chr13 24258428 24258586 -96025726 + GA-rich Low_complexity Low_complexity 4 178 0 4 770 336 24 0 0 chr13 24258586 24258627 -96025685 + (CAGG)n Simple_repeat Simple_repeat 1 41 0 4 770 406 342 0 0 chr13 24258638 24258749 -96025563 + RSINE1 SINE B4 55 165 0 4 770 23 0 0 0 chr13 24258772 24258795 -96025517 + AT_rich Low_complexity Low_complexity 1 23 0 4 770 374 288 43 35 chr13 24258809 24258924 -96025388 + B1F1 SINE Alu 4 119 -1 4 770 216 0 0 0 chr13 24259534 24259558 -96024754 + (GA)n Simple_repeat Simple_repeat 2 25 0 4 770 744 12 0 0 chr13 24259558 24259643 -96024669 + (GAA)n Simple_repeat Simple_repeat 3 87 0 4 770 267 295 42 0 chr13 24259903 24259998 -96024314 - B1F SINE Alu -10 139 41 4 770 295 316 78 9 chr13 24260523 24260638 -96023674 + B3A SINE B2 34 156 -42 4 770 215 170 21 0 chr13 24260669 24260716 -96023596 + CT-rich Low_complexity Low_complexity 2 49 0 4 770 454 249 91 19 chr13 24260762 24260943 -96023369 + B3 SINE B2 1 184 -11 4 770 305 309 76 55 chr13 24262144 24262380 -96021932 + L1MD LINE L1 3540 3780 -2366 4 770 36 40 0 0 chr13 24262394 24262444 -96021868 + AT_rich Low_complexity Low_complexity 1 50 0 4 770 40 37 0 0 chr13 24262614 24262668 -96021644 + AT_rich Low_complexity Low_complexity 1 54 0 4 770 384 256 40 71 chr13 24262684 24262810 -96021502 + L1ME2 LINE L1 4015 4136 -2010 4 770 483 323 134 50 chr13 24262824 24263003 -96021309 - LTR40c LTR ERVL -18 444 241 4 770 303 104 0 0 chr13 24263003 24263051 -96021261 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 770 252 0 0 0 chr13 24263051 24263078 -96021234 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 770 483 281 102 52 chr13 24263078 24263286 -96021026 - LTR40c LTR ERVL -212 253 17 4 770 750 310 32 56 chr13 24263709 24264047 -96020265 + RLTR18 LTR ERVK 1 330 -286 4 770 1087 242 104 7 chr13 24264077 24264364 -96019948 + RLTR18B LTR ERVK 191 505 -7 4 770 456 317 99 25 chr13 24264380 24264774 -96019538 + L1ME2 LINE L1 5680 6118 -46 4 770 361 284 11 0 chr13 24264862 24264950 -96019362 + PB1D7 SINE Alu 1 89 -31 4 770 929 156 4 19 chr13 24265175 24265436 -96018876 + GA-rich Low_complexity Low_complexity 1 256 0 4 770 22 35 0 0 chr13 24266131 24266160 -96018152 + AT_rich Low_complexity Low_complexity 1 29 0 4 770 313 303 101 25 chr13 24266460 24266619 -96017693 - MER2B DNA MER2_type -4 332 162 4 770 517 167 10 30 chr13 24266924 24267023 -96017289 + PB1D10 SINE Alu 6 102 -15 4 770 633 243 171 0 chr13 24267429 24267610 -96016702 + ID_B1 SINE B4 1 212 -12 4 770 375 23 0 0 chr13 24267610 24267654 -96016658 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 4 770 435 198 0 0 chr13 24268163 24268244 -96016068 + ID SINE ID 2 82 -142 4 770 392 312 0 18 chr13 24268288 24268399 -96015913 - B1F1 SINE Alu -40 109 1 4 770 253 304 10 71 chr13 24268399 24268436 -96015876 - B4A SINE B4 -209 83 53 4 770 513 275 8 0 chr13 24268557 24268677 -96015635 - ID_B1 SINE B4 -24 200 80 4 770 227 219 0 0 chr13 24268813 24268854 -96015458 - PB1D10 SINE Alu -30 87 47 4 770 441 328 0 39 chr13 24269127 24269308 -96015004 + GA-rich Low_complexity Low_complexity 5 178 0 4 770 319 209 0 19 chr13 24269332 24269439 -96014873 + G-rich Low_complexity Low_complexity 2 106 0 4 770 288 226 101 61 chr13 24272922 24273021 -96011291 - PB1D10 SINE Alu 0 127 25 4 770 243 154 0 0 chr13 24273027 24273066 -96011246 + B3 SINE B2 11 49 -167 4 770 252 0 0 0 chr13 24273301 24273329 -96010983 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 770 333 0 0 0 chr13 24273332 24273369 -96010943 + (TAG)n Simple_repeat Simple_repeat 2 38 0 4 770 375 323 20 0 chr13 24273369 24273468 -96010844 - B3A SINE B2 -30 168 68 4 770 210 229 148 0 chr13 24273595 24273656 -96010656 + B1F1 SINE Alu 6 75 -74 4 770 540 270 144 19 chr13 24273663 24273920 -96010392 + B4A SINE B4 3 291 -1 4 770 21 36 0 0 chr13 24273991 24274019 -96010293 + AT_rich Low_complexity Low_complexity 1 28 0 4 770 295 71 0 0 chr13 24274219 24274261 -96010051 - B3A SINE B2 -147 51 10 4 770 438 238 10 11 chr13 24274257 24274356 -96009956 + B3A SINE B2 66 163 -53 4 770 324 0 0 0 chr13 24274356 24274392 -96009920 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 770 385 287 13 87 chr13 24274392 24274441 -96009871 + B3 SINE B2 164 203 -13 4 770 196 154 19 19 chr13 24274461 24274514 -96009798 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 770 514 259 50 0 chr13 24275196 24275335 -96008977 - B1F2 SINE Alu -1 148 3 4 770 440 248 18 18 chr13 24275522 24275633 -96008679 + B3A SINE B2 2 112 -86 4 770 234 254 17 0 chr13 24275775 24275834 -96008478 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 770 297 0 0 0 chr13 24275834 24275867 -96008445 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 4 770 216 0 0 0 chr13 24276476 24276500 -96007812 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 770 321 148 0 0 chr13 24277027 24277081 -96007231 + BC1_Mm scRNA scRNA 2 55 -97 5 770 239 240 39 26 chr13 24277089 24277166 -96007146 + MIR SINE MIR 110 187 -75 5 770 236 297 53 26 chr13 24277326 24277402 -96006910 - ID SINE ID -146 78 1 5 770 258 105 0 0 chr13 24277453 24277491 -96006821 + (TCC)n Simple_repeat Simple_repeat 2 39 0 5 770 236 302 16 0 chr13 24277778 24277841 -96006471 - PB1 SINE Alu -26 101 38 5 770 303 333 136 33 chr13 24277888 24278130 -96006182 + L2b LINE L2 3074 3340 -35 5 770 277 321 53 44 chr13 24278488 24278602 -96005710 + B1F1 SINE Alu 34 148 -1 5 770 295 263 0 0 chr13 24279419 24279476 -96004836 + B1F2 SINE Alu 4 60 -89 5 770 208 139 0 0 chr13 24279531 24279567 -96004745 + (CAAAA)n Simple_repeat Simple_repeat 3 38 0 5 770 328 265 168 81 chr13 24279965 24280150 -96004162 + MER3 DNA MER1_type 2 202 -7 5 770 665 268 144 96 chr13 24280208 24280569 -96003743 + MTD LTR MaLR 1 419 -2 5 770 270 0 0 0 chr13 24282648 24282678 -96001634 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 770 778 299 62 36 chr13 24283237 24283546 -96000766 - MER2 DNA MER2_type -3 342 26 5 770 483 285 79 14 chr13 24284480 24284619 -95999693 - B4A SINE B4 -141 151 4 5 770 388 277 33 67 chr13 24284718 24284838 -95999474 - B1F2 SINE Alu -32 117 2 5 770 757 237 45 5 chr13 24285966 24286165 -95998147 + B3 SINE B2 5 211 -5 5 770 245 333 24 12 chr13 24286509 24286594 -95997718 + MER21B LTR ERV1 514 599 -264 5 770 204 135 0 0 chr13 24286963 24287000 -95997312 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 5 770 180 111 0 0 chr13 24287319 24287346 -95996966 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 5 770 22 0 0 0 chr13 24287599 24287621 -95996691 + AT_rich Low_complexity Low_complexity 1 22 0 5 770 235 228 101 87 chr13 24288441 24288590 -95995722 - MER44B DNA MER2_type -111 439 289 5 770 287 342 67 0 chr13 24288648 24288768 -95995544 + ID_B1 SINE B4 92 219 -5 5 770 366 285 95 51 chr13 24288800 24288937 -95995375 - MER44B DNA MER2_type -385 165 23 5 770 472 254 103 0 chr13 24288950 24289076 -95995236 - ID_B1 SINE B4 -2 222 84 5 770 329 270 13 13 chr13 24289463 24289538 -95994774 - RSINE1 SINE B4 -70 95 21 5 770 275 315 18 36 chr13 24289792 24289904 -95994408 + PB1D10 SINE Alu 1 110 -7 5 770 180 111 0 0 chr13 24290634 24290661 -95993651 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 5 770 205 309 217 28 chr13 24290783 24290963 -95993349 - MIRc SINE MIR -54 214 1 5 770 246 275 28 56 chr13 24291049 24291157 -95993155 - FAM SINE Alu 0 311 207 5 770 387 0 0 0 chr13 24292280 24292323 -95991989 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 770 251 250 47 0 chr13 24292599 24292663 -95991649 + ID4_ SINE ID 5 71 -12 5 770 294 317 9 9 chr13 24293020 24293125 -95991187 + PB1D10 SINE Alu 13 117 0 5 770 401 229 243 0 chr13 24294643 24294783 -95989529 - B3 SINE B2 -9 207 34 5 770 607 236 76 11 chr13 24294926 24295110 -95989202 + L1MD2 LINE L1 5880 6075 -284 5 770 763 94 0 38 chr13 24295201 24295333 -95988979 + Lx LINE L1 6528 6654 0 5 770 641 241 37 75 chr13 24295555 24295743 -95988569 - MTEa LTR MaLR -193 186 6 5 770 255 224 92 23 chr13 24295747 24295834 -95988478 + L1MD2 LINE L1 6129 6221 -21 5 770 839 168 34 7 chr13 24296794 24296972 -95987340 + B3 SINE B2 2 192 -6 5 770 443 283 9 26 chr13 24297268 24297384 -95986928 + ID_B1 SINE B4 78 191 -33 5 770 252 0 0 0 chr13 24297387 24297415 -95986897 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5 770 288 0 0 0 chr13 24297748 24297780 -95986532 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 770 465 156 30 91 chr13 24298254 24298353 -95985959 - ID_B1 SINE B4 0 224 132 5 770 23 0 0 0 chr13 24298818 24298841 -95985471 + AT_rich Low_complexity Low_complexity 1 23 0 5 770 1653 74 0 14 chr13 24298960 24299180 -95985132 - L1_Mus1 LINE L1 -3 6564 6348 5 770 699 220 149 65 chr13 24299638 24299900 -95984412 - MTEa LTR MaLR -85 294 11 5 770 3409 48 0 0 chr13 24300096 24300492 -95983820 + MTA_Mm LTR MaLR 1 396 0 5 770 264 300 23 81 chr13 24300964 24300984 -95983328 + B4A SINE B4 73 87 -205 5 770 304 271 64 0 chr13 24300984 24301078 -95983234 + B1F2 SINE Alu 1 99 -48 5 770 735 263 153 8 chr13 24301736 24301985 -95982327 + B4 SINE B4 7 291 -1 5 770 23 0 0 0 chr13 24302042 24302065 -95982247 + AT_rich Low_complexity Low_complexity 1 23 0 5 770 228 274 200 12 chr13 24302077 24302162 -95982150 + ORR1E LTR MaLR 3 103 -256 5 770 715 233 39 87 chr13 24302300 24302507 -95981805 + ID_B1 SINE B4 3 199 -25 5 770 358 240 59 50 chr13 24303402 24303503 -95980809 - PB1D10 SINE Alu -13 104 3 5 770 203 293 67 0 chr13 24304081 24304156 -95980156 + MIR SINE MIR 113 192 -70 5 770 246 340 116 20 chr13 24304684 24304858 -95979454 - MIRc SINE MIR -61 201 12 5 770 1137 174 292 22 chr13 24304892 24305209 -95979103 - MTD LTR MaLR 0 419 16 5 770 327 164 0 0 chr13 24305475 24305536 -95978776 + GA-rich Low_complexity Low_complexity 4 64 0 5 770 345 364 7 14 chr13 24305539 24305684 -95978628 + B1F SINE Alu 6 149 0 5 770 427 284 112 36 chr13 24305669 24305892 -95978420 - MER33 DNA MER1_type -60 264 25 5 770 285 203 15 15 chr13 24306696 24306761 -95977551 + B3A SINE B2 1 65 -133 5 770 445 294 13 82 chr13 24306975 24306997 -95977315 + ID_B1 SINE B4 69 216 -8 5 770 528 274 44 15 chr13 24306997 24307134 -95977178 + B1F SINE Alu 1 141 -8 5 770 460 316 51 6 chr13 24307958 24308114 -95976198 + RSINE1 SINE B4 3 165 0 5 770 280 242 158 0 chr13 24308286 24308381 -95975931 - L2 LINE L2 -452 2967 2858 5 770 888 89 73 7 chr13 24308618 24308754 -95975558 + B2_Mm2 SINE B2 1 145 -50 5 770 210 37 0 0 chr13 24308760 24308787 -95975525 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 5 770 196 327 0 0 chr13 24309799 24309854 -95974458 - L2 LINE L2 -2020 1399 1345 5 770 474 261 14 61 chr13 24309906 24310053 -95974259 + ID_B1 SINE B4 84 223 -1 5 770 453 208 27 36 chr13 24310442 24310552 -95973760 + PB1D10 SINE Alu 9 117 0 5 770 211 318 110 33 chr13 24310774 24310865 -95973447 + MIR3 SINE MIR 70 167 -41 5 770 216 0 0 0 chr13 24311234 24311258 -95973054 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 5 770 354 266 13 0 chr13 24311267 24311346 -95972966 - ID4 SINE ID 0 83 4 5 770 599 301 30 30 chr13 24311405 24311607 -95972705 + ID_B1 SINE B4 2 203 -21 5 770 311 357 18 43 chr13 24311826 24311953 -95972359 - L1MEg LINE L1 -4134 1950 1829 5 770 307 328 0 8 chr13 24311953 24312070 -95972242 - PB1D10 SINE Alu -1 116 1 5 770 311 357 18 43 chr13 24312070 24312106 -95972206 - L1MEg LINE L1 -4256 1828 1791 5 770 357 348 70 14 chr13 24312131 24312274 -95972038 + MIR SINE MIR 31 181 -81 5 770 470 240 78 46 chr13 24312524 24312677 -95971635 - RSINE1 SINE B4 -5 160 3 5 770 210 37 0 0 chr13 24313090 24313117 -95971195 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 5 770 399 324 36 7 chr13 24313127 24313264 -95971048 + ID_B1 SINE B4 84 224 0 5 770 273 196 0 0 chr13 24313522 24313568 -95970744 + PB1D10 SINE Alu 54 99 -18 5 770 303 161 0 0 chr13 24313581 24313637 -95970675 + GA-rich Low_complexity Low_complexity 2 57 0 5 770 613 260 13 7 chr13 24313879 24314030 -95970282 + ID_B1 SINE B4 73 224 0 5 770 824 290 35 21 chr13 24314794 24315076 -95969236 + B4A SINE B4 1 286 -6 5 770 447 225 12 6 chr13 24315091 24315261 -95969051 + GA-rich Low_complexity Low_complexity 2 172 0 5 770 1098 120 0 0 chr13 24315266 24315441 -95968871 + (GA)n Simple_repeat Simple_repeat 2 176 0 5 770 210 45 44 22 chr13 24316110 24316155 -95968157 + (TTAA)n Simple_repeat Simple_repeat 2 47 0 5 770 346 238 0 0 chr13 24316199 24316262 -95968050 + ID4 SINE ID 15 77 -6 5 770 315 327 173 0 chr13 24316742 24316846 -95967466 + B1F1 SINE Alu 2 123 -26 5 770 354 250 0 0 chr13 24316784 24316848 -95967464 + ID_B1 SINE B4 140 203 -21 5 770 374 228 250 17 chr13 24316862 24316978 -95967334 + B1F SINE Alu 1 143 -6 5 770 245 254 48 0 chr13 24317001 24317064 -95967248 + tRNA-Ala-GCY_ tRNA tRNA 2 67 -8 5 770 225 0 0 0 chr13 24317723 24317748 -95966564 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 770 2939 140 4 11 chr13 24318085 24318546 -95965766 + RLTR17 LTR ERVK 98 555 -137 5 770 2438 101 60 35 chr13 24318552 24318953 -95965359 + IAPLTR2a LTR ERVK 1 411 0 5 770 341 75 38 0 chr13 24318955 24319008 -95965304 + IAPEz-int LTR ERVK 3 57 -1930 5 770 234 0 0 0 chr13 24319008 24319034 -95965278 + (A)n Simple_repeat Simple_repeat 1 26 0 5 770 3562 71 1 15 chr13 24319041 24319650 -95964662 + IAPEz-int LTR ERVK 137 662 -5819 5 770 996 59 0 0 chr13 24319650 24319769 -95964543 + IAPEz-int LTR ERVK 1359 1477 -5004 5 770 1702 78 9 0 chr13 24319770 24319987 -95964325 + IAPEz-int LTR ERVK 2252 2470 -5210 5 770 15694 35 3 0 chr13 24320005 24321803 -95962509 + IAPEz-int LTR ERVK 4678 6481 0 5 770 2438 101 60 35 chr13 24321803 24322204 -95962108 + IAPLTR2a LTR ERVK 1 411 0 5 770 1812 225 23 42 chr13 24322531 24322927 -95961385 - MTD LTR MaLR 0 419 22 5 770 243 0 0 0 chr13 24322927 24322954 -95961358 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 770 1812 225 23 42 chr13 24322954 24322984 -95961328 - MTD LTR MaLR -398 21 1 5 770 294 256 111 46 chr13 24323886 24324050 -95960262 + ID_B1 SINE B4 74 246 -46 5 770 246 270 98 33 chr13 24324300 24324392 -95959920 - PB1 SINE Alu -3 124 27 5 770 297 0 0 0 chr13 24324548 24324581 -95959731 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 770 204 299 164 55 chr13 24325166 24325331 -95958981 + L2 LINE L2 2361 2554 -865 5 770 321 290 28 0 chr13 24325331 24325438 -95958874 + PB1D7 SINE Alu 2 111 -9 5 770 204 299 164 55 chr13 24325438 24325491 -95958821 + L2 LINE L2 2555 2603 -816 5 770 492 18 0 0 chr13 24326083 24326140 -95958172 + (TCTCC)n Simple_repeat Simple_repeat 1 57 0 6 770 500 333 0 0 chr13 24326140 24326266 -95958046 - B4A SINE B4 -166 126 1 6 770 266 271 62 76 chr13 24326759 24326891 -95957421 + B4A SINE B4 24 153 -139 6 770 1628 185 127 32 chr13 24326891 24327231 -95957081 + MTD LTR MaLR 1 372 -47 6 770 402 340 47 34 chr13 24327231 24327380 -95956932 + B4A SINE B4 141 291 -1 6 770 286 303 45 0 chr13 24328005 24328071 -95956241 - MER2B DNA MER2_type -263 73 5 6 770 427 252 69 20 chr13 24328115 24328216 -95956096 - ID_B1 SINE B4 -17 207 102 6 770 575 279 8 0 chr13 24329258 24329380 -95954932 - ID_B1 SINE B4 -20 204 82 6 770 697 209 65 61 chr13 24329408 24329622 -95954690 + B3 SINE B2 2 216 0 6 770 263 307 38 51 chr13 24329640 24329719 -95954593 + PB1D7 SINE Alu 1 78 -42 6 770 417 298 10 0 chr13 24329771 24329875 -95954437 + B4A SINE B4 6 110 -182 6 770 180 0 0 0 chr13 24329974 24329994 -95954318 + (G)n Simple_repeat Simple_repeat 1 20 0 6 770 357 247 10 31 chr13 24330294 24330390 -95953922 + MLT1A1 LTR MaLR 313 406 -2 6 770 558 290 121 21 chr13 24331657 24331847 -95952465 + ID_B1 SINE B4 3 211 -13 6 770 282 56 0 0 chr13 24331851 24331887 -95952425 + (TAA)n Simple_repeat Simple_repeat 2 37 0 6 770 232 271 172 33 chr13 24331890 24332012 -95952300 + L1M3 LINE L1 5716 5854 -317 6 770 409 303 98 49 chr13 24332722 24332885 -95951427 + ID_B1 SINE B4 53 223 -1 6 770 301 224 188 0 chr13 24333524 24333609 -95950703 - PB1D10 SINE Alu -14 103 3 6 770 302 212 175 0 chr13 24333535 24333615 -95950697 - ID_B1 SINE B4 -53 171 78 6 770 626 243 29 0 chr13 24333654 24333790 -95950522 - B1F SINE Alu -9 140 1 6 770 244 280 71 112 chr13 24334611 24334780 -95949532 - MLT1H-int LTR MaLR -631 778 617 6 770 345 100 0 0 chr13 24335050 24335100 -95949212 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 770 1222 124 37 16 chr13 24335146 24335335 -95948977 - B2_Mm2 SINE B2 -2 193 1 6 770 995 248 18 0 chr13 24335335 24335557 -95948755 - B4A SINE B4 -64 228 3 6 770 308 314 0 56 chr13 24335586 24335711 -95948601 - PB1D7 SINE Alu -2 118 1 6 770 231 298 0 23 chr13 24336143 24336229 -95948083 + G-rich Low_complexity Low_complexity 5 88 0 6 770 362 286 48 48 chr13 24336394 24336497 -95947815 + PB1D10 SINE Alu 1 103 -14 6 770 270 0 0 0 chr13 24336497 24336527 -95947785 + (TAAAA)n Simple_repeat Simple_repeat 5 34 0 6 770 261 236 39 106 chr13 24336574 24336678 -95947634 + MTE2b LTR MaLR 153 249 -130 6 770 296 266 64 9 chr13 24336688 24336798 -95947514 + Lx7 LINE L1 6976 7091 -605 6 770 232 299 113 50 chr13 24336795 24337034 -95947278 + Lx8 LINE L1 7190 7443 -30 6 770 24 0 0 0 chr13 24337096 24337120 -95947192 + AT_rich Low_complexity Low_complexity 1 24 0 6 770 1796 292 130 44 chr13 24337120 24337988 -95946324 + Lx9 LINE L1 6527 7469 -175 6 770 438 242 63 0 chr13 24338272 24338367 -95945945 - PB1D10 SINE Alu -7 110 10 6 770 464 143 0 0 chr13 24338297 24338367 -95945945 - ID_B1 SINE B4 -64 160 91 6 770 316 250 65 11 chr13 24338433 24338526 -95945786 + ID_B1 SINE B4 120 217 -7 6 770 277 182 45 29 chr13 24338481 24338555 -95945757 + PB1D10 SINE Alu 63 131 -16 6 770 2573 131 58 2 chr13 24338699 24339098 -95945214 - MTC LTR MaLR 0 421 1 6 770 249 139 0 0 chr13 24339463 24339506 -95944806 + (T)n Simple_repeat Simple_repeat 1 43 0 6 770 322 257 50 84 chr13 24339745 24339864 -95944448 + PB1D7 SINE Alu 6 120 0 6 770 585 235 0 9 chr13 24340388 24340504 -95943808 + PB1D7 SINE Alu 1 115 -5 6 770 1043 161 22 61 chr13 24341172 24341403 -95942909 + URR1A DNA MER1_type 5 226 0 6 770 291 299 34 17 chr13 24341797 24341916 -95942396 + PB1 SINE Alu 1 121 -6 6 770 593 255 35 14 chr13 24342531 24342674 -95941638 - RSINE1 SINE B4 -18 147 2 6 770 905 257 75 17 chr13 24342678 24343023 -95941289 + L1MB5 LINE L1 5679 6043 -131 6 770 409 257 80 40 chr13 24343171 24343321 -95940991 + ID_B1 SINE B4 62 217 -7 6 770 233 188 62 0 chr13 24343278 24343326 -95940986 + PB1D10 SINE Alu 65 115 -2 6 770 643 275 5 43 chr13 24343337 24343523 -95940789 + B4A SINE B4 1 179 -113 6 770 658 275 57 35 chr13 24344080 24344363 -95939949 - B4A SINE B4 -2 290 2 6 770 366 302 47 0 chr13 24344859 24344965 -95939347 - PB1D10 SINE Alu -6 111 1 6 770 393 343 9 0 chr13 24345097 24345202 -95939110 + PB1D9 SINE Alu 1 106 -14 6 770 845 256 29 10 chr13 24345225 24345430 -95938882 + B3 SINE B2 1 209 -7 6 770 22 0 0 0 chr13 24345636 24345658 -95938654 + AT_rich Low_complexity Low_complexity 1 22 0 6 770 291 221 38 104 chr13 24346298 24346404 -95937908 + RSINE1 SINE B4 67 165 0 6 770 291 183 99 0 chr13 24346456 24346527 -95937785 + L1MB1 LINE L1 5785 5862 -318 6 770 272 240 93 0 chr13 24346554 24346629 -95937683 + PB1 SINE Alu 46 127 0 6 770 315 260 65 8 chr13 24346661 24346785 -95937527 + L1MB1 LINE L1 5885 6015 -153 6 770 299 260 149 0 chr13 24347090 24347185 -95937127 + B1F1 SINE Alu 4 111 -6 6 770 999 152 18 12 chr13 24347197 24347363 -95936949 + B2_Mm2 SINE B2 1 167 -28 6 770 201 196 0 0 chr13 24347373 24347419 -95936893 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 770 2505 191 92 0 chr13 24347631 24348042 -95936270 + Lx9 LINE L1 7028 7476 -168 6 770 332 43 22 0 chr13 24348042 24348088 -95936224 + (TG)n Simple_repeat Simple_repeat 1 47 0 6 770 2505 191 92 0 chr13 24348088 24348240 -95936072 + Lx9 LINE L1 7477 7642 -2 6 770 573 55 0 0 chr13 24348324 24348397 -95935915 + (TA)n Simple_repeat Simple_repeat 1 73 0 6 770 902 98 0 8 chr13 24348420 24348543 -95935769 - B2_Mm2 SINE B2 -73 122 1 6 770 486 168 93 21 chr13 24348616 24348713 -95935599 + B1_Mur2 SINE Alu 45 148 -1 6 770 1483 271 15 41 chr13 24348884 24349273 -95935039 + MTEa LTR MaLR 1 379 0 6 770 480 220 208 144 chr13 24349577 24349779 -95934533 + ID_B1 SINE B4 3 217 -7 6 770 733 234 72 48 chr13 24350017 24350224 -95934088 - B3 SINE B2 -3 213 2 6 770 201 286 229 30 chr13 24350384 24350550 -95933762 - L3 LINE CR1 -137 4352 4154 6 770 498 256 24 40 chr13 24350860 24350986 -95933326 - ID_B1 SINE B4 -15 209 86 6 770 233 241 102 125 chr13 24350896 24351024 -95933288 - MT2B LTR ERVL -348 253 129 6 770 418 267 30 0 chr13 24351484 24351585 -95932727 + ID_B1 SINE B4 109 212 -12 6 770 183 42 0 0 chr13 24351587 24351611 -95932701 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 6 770 802 295 38 5 chr13 24351614 24351825 -95932487 + ID_B1 SINE B4 3 220 -4 6 770 619 223 24 48 chr13 24351843 24352008 -95932304 + RSINE1 SINE B4 5 165 0 6 770 218 321 167 0 chr13 24352063 24352147 -95932165 + PB1D7 SINE Alu 6 103 -17 6 770 374 226 30 61 chr13 24352289 24352388 -95931924 + MTD LTR MaLR 1 96 -325 6 770 488 248 101 14 chr13 24352388 24352527 -95931785 + Lx6 LINE L1 7267 7417 -43 6 770 596 14 0 14 chr13 24352549 24352623 -95931689 + (GGGA)n Simple_repeat Simple_repeat 4 76 0 6 770 569 231 182 19 chr13 24352658 24352817 -95931495 + MTD LTR MaLR 172 356 -63 6 770 557 28 0 14 chr13 24352914 24352986 -95931326 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 770 362 179 231 43 chr13 24353562 24353679 -95930633 + ID_B1 SINE B4 84 222 -2 6 770 327 49 0 0 chr13 24353783 24353824 -95930488 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 6 770 600 203 0 71 chr13 24354667 24354794 -95929518 - ID_B1 SINE B4 -1 223 106 6 770 445 267 76 69 chr13 24354794 24354812 -95929500 - B1F SINE Alu -1 148 3 6 770 1212 48 0 0 chr13 24355349 24355495 -95928817 + B1_Mm SINE Alu 2 147 0 6 770 473 262 56 14 chr13 24355510 24355653 -95928659 + B1F SINE Alu 1 149 0 6 770 229 208 36 54 chr13 24356208 24356264 -95928048 - MER5A DNA MER1_type -10 179 125 6 770 455 214 77 84 chr13 24356264 24356407 -95927905 + B1F2 SINE Alu 1 142 -7 6 770 389 191 88 35 chr13 24356407 24356521 -95927791 + B1_Mur1 SINE Alu 30 149 0 6 770 1354 65 21 26 chr13 24356535 24356725 -95927587 - B2_Mm2 SINE B2 -5 190 2 6 770 241 304 38 0 chr13 24357433 24357512 -95926800 - ID SINE ID -140 84 3 6 770 345 214 75 37 chr13 24357463 24357570 -95926742 - ZP3AR Satellite Satellite -59 153 43 6 770 240 111 0 0 chr13 24358261 24358306 -95926006 + (A)n Simple_repeat Simple_repeat 1 45 0 6 770 604 256 22 8 chr13 24358657 24358791 -95925521 + B1F SINE Alu 6 141 -8 6 770 189 0 0 0 chr13 24358986 24359007 -95925305 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 770 672 255 158 15 chr13 24359020 24359223 -95925089 - B4 SINE B4 -57 235 4 6 770 182 62 31 0 chr13 24359233 24359265 -95925047 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 6 770 420 257 84 42 chr13 24359267 24359409 -95924903 - B1_Mur1 SINE Alu -1 148 1 6 770 610 257 78 69 chr13 24359614 24359831 -95924481 + ID_B1 SINE B4 6 224 0 6 770 406 229 158 17 chr13 24359841 24359943 -95924369 + B1F SINE Alu 13 133 -16 6 770 597 69 0 0 chr13 24359943 24360030 -95924282 + (TC)n Simple_repeat Simple_repeat 2 88 0 6 770 406 229 158 17 chr13 24360030 24360047 -95924265 + B1F SINE Alu 134 149 0 6 770 215 61 30 0 chr13 24360049 24360082 -95924230 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 6 770 288 0 0 0 chr13 24361344 24361376 -95922936 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 770 672 221 21 0 chr13 24361728 24361873 -95922439 + B1_Mur2 SINE Alu 1 148 -1 7 770 226 233 49 16 chr13 24361910 24361971 -95922341 + PB1D9 SINE Alu 47 109 -11 7 770 206 167 0 59 chr13 24361976 24362027 -95922285 + (TAAA)n Simple_repeat Simple_repeat 4 51 0 7 770 288 0 0 0 chr13 24362145 24362177 -95922135 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 770 270 0 0 0 chr13 24362177 24362206 -95922106 + (TA)n Simple_repeat Simple_repeat 1 30 0 7 770 351 0 0 0 chr13 24362206 24362244 -95922068 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 770 24 32 0 0 chr13 24362367 24362398 -95921914 + AT_rich Low_complexity Low_complexity 1 31 0 7 770 381 311 79 57 chr13 24362405 24362545 -95921767 + B1F SINE Alu 1 143 -6 7 770 521 241 45 0 chr13 24362439 24362551 -95921761 + ID_B1 SINE B4 108 224 0 7 770 528 267 102 45 chr13 24362869 24363309 -95921003 + L1MD1 LINE L1 5470 5934 -308 7 770 211 297 108 0 chr13 24363331 24363405 -95920907 - B1F SINE Alu -66 83 2 7 770 313 241 78 33 chr13 24363440 24363530 -95920782 + ID_B1 SINE B4 109 202 -22 7 770 251 219 68 68 chr13 24363452 24363540 -95920772 + B1_Mur3 SINE Alu 47 134 -15 7 770 932 240 53 14 chr13 24364012 24364219 -95920093 + B3 SINE B2 1 215 -1 7 770 27 0 0 0 chr13 24364219 24364246 -95920066 + AT_rich Low_complexity Low_complexity 1 27 0 7 770 261 0 0 0 chr13 24364728 24364757 -95919555 + (A)n Simple_repeat Simple_repeat 1 29 0 7 770 422 346 43 33 chr13 24365252 24365471 -95918841 + MIRb SINE MIR 23 242 -20 7 770 451 240 50 0 chr13 24365553 24365653 -95918659 + PB1D7 SINE Alu 1 105 -15 7 770 345 47 0 0 chr13 24365668 24365711 -95918601 + (GGGGA)n Simple_repeat Simple_repeat 5 47 0 7 770 991 244 138 8 chr13 24365725 24365965 -95918347 + B4A SINE B4 1 271 -21 7 770 326 80 20 0 chr13 24365976 24366026 -95918286 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 770 248 297 109 0 chr13 24366438 24366502 -95917810 + ID4 SINE ID 1 71 -12 7 770 257 283 43 17 chr13 24367185 24367300 -95917012 + PB1D9 SINE Alu 3 120 0 7 770 839 234 65 10 chr13 24367375 24367574 -95916738 - B3 SINE B2 -6 210 1 7 770 718 232 7 7 chr13 24367587 24367730 -95916582 - B1F SINE Alu -6 143 1 7 770 204 40 0 0 chr13 24367774 24367799 -95916513 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 7 770 263 283 43 11 chr13 24368546 24368639 -95915673 - B2_Mm2 SINE B2 -98 97 2 7 770 272 212 15 0 chr13 24368664 24368730 -95915582 + ID4 SINE ID 2 68 -15 7 770 349 330 0 0 chr13 24368748 24368863 -95915449 + PB1 SINE Alu 5 119 -8 7 770 186 103 0 0 chr13 24368874 24368903 -95915409 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 7 770 216 0 0 0 chr13 24369928 24369952 -95914360 + (GA)n Simple_repeat Simple_repeat 1 24 0 7 770 742 182 0 15 chr13 24370247 24370381 -95913931 - B1_Mur1 SINE Alu -6 143 12 7 770 297 0 0 0 chr13 24370384 24370417 -95913895 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 770 429 264 54 54 chr13 24370445 24370593 -95913719 + ID_B1 SINE B4 77 224 0 7 770 288 0 0 0 chr13 24371243 24371275 -95913037 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 770 270 0 0 0 chr13 24372641 24372671 -95911641 + (A)n Simple_repeat Simple_repeat 1 30 0 7 770 284 148 16 0 chr13 24372913 24372974 -95911338 + CT-rich Low_complexity Low_complexity 6 67 0 7 770 569 223 0 32 chr13 24373826 24373951 -95910361 - B1_Mur1 SINE Alu -7 142 22 7 770 216 263 168 0 chr13 24374008 24374103 -95910209 - PB1D10 SINE Alu 0 117 7 7 770 474 244 119 119 chr13 24374193 24374454 -95909858 - RMER15 LTR ERVL -15 560 300 7 770 406 230 115 61 chr13 24374715 24374863 -95909449 - RSINE1 SINE B4 -8 157 2 7 770 228 205 0 0 chr13 24375164 24375203 -95909109 - ID4_ SINE ID -6 77 39 7 770 483 60 0 0 chr13 24375615 24375682 -95908630 + (TG)n Simple_repeat Simple_repeat 2 68 0 7 770 437 317 23 58 chr13 24375684 24375858 -95908454 - B3 SINE B2 -47 169 2 7 770 737 255 33 24 chr13 24375867 24376080 -95908232 - ID_B1 SINE B4 -9 215 1 7 770 464 252 46 92 chr13 24376095 24376248 -95908064 - B1F SINE Alu 0 149 4 7 770 180 0 0 0 chr13 24376786 24376806 -95907506 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 770 414 0 0 0 chr13 24376806 24376851 -95907461 + (GA)n Simple_repeat Simple_repeat 1 46 0 7 770 403 278 10 0 chr13 24376853 24376950 -95907362 - RSINE1 SINE B4 -66 99 2 7 770 2268 98 3 3 chr13 24376952 24377270 -95907042 + ORR1A3 LTR MaLR 1 318 -8 7 770 301 301 137 8 chr13 24377502 24377626 -95906686 + B1F SINE Alu 10 149 0 7 770 685 289 51 26 chr13 24377822 24378017 -95906295 + ID_B1 SINE B4 3 202 -22 7 770 214 200 40 0 chr13 24378034 24378084 -95906228 + GA-rich Low_complexity Low_complexity 6 57 0 7 770 1166 108 43 5 chr13 24378343 24378530 -95905782 + B2_Mm2 SINE B2 2 195 0 7 770 2222 59 3 20 chr13 24378531 24378827 -95905485 + L1Md_F2 LINE L1 6291 6581 -1 7 771 514 240 0 10 chr13 24379621 24379722 -95904590 - B1F SINE Alu -41 108 9 7 771 1252 239 120 21 chr13 24380064 24380398 -95903914 - MTEa LTR MaLR 0 379 13 7 771 402 271 0 0 chr13 24381064 24381149 -95903163 - B1_Mur3 SINE Alu -64 85 1 7 771 574 210 126 0 chr13 24381172 24381291 -95903021 - B1_Mur3 SINE Alu -6 143 10 7 771 270 0 0 0 chr13 24381380 24381410 -95902902 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 771 441 0 0 0 chr13 24381410 24381458 -95902854 + (GA)n Simple_repeat Simple_repeat 1 49 0 7 771 552 175 0 10 chr13 24381461 24381559 -95902753 + PB1D9 SINE Alu 23 119 -1 7 771 236 83 68 45 chr13 24381575 24381663 -95902649 + (CACCC)n Simple_repeat Simple_repeat 5 94 0 7 771 1039 240 71 34 chr13 24381954 24382333 -95901979 + Lx9 LINE L1 5543 5980 -1664 7 771 500 316 22 0 chr13 24382356 24382495 -95901817 - B3A SINE B2 -55 143 2 7 771 720 241 108 16 chr13 24382539 24382733 -95901579 - ID_B1 SINE B4 -12 212 1 7 771 304 209 272 11 chr13 24382763 24382855 -95901457 + PB1D10 SINE Alu 1 116 -1 7 771 474 275 93 27 chr13 24382859 24383042 -95901270 + B2_Mm2 SINE B2 1 195 0 7 771 198 171 0 0 chr13 24383119 24383160 -95901152 + CT-rich Low_complexity Low_complexity 3 43 0 7 771 512 310 14 7 chr13 24383714 24383857 -95900455 - ID_B1 SINE B4 -80 144 1 7 771 746 260 33 9 chr13 24383864 24384173 -95900139 - ORR1E LTR MaLR 0 379 3 7 771 323 261 150 8 chr13 24384200 24384320 -95899992 + B1F SINE Alu 5 141 -8 7 771 484 226 25 34 chr13 24384213 24384332 -95899980 + ID_B1 SINE B4 107 224 0 7 771 367 263 172 32 chr13 24384563 24384720 -95899592 + B3A SINE B2 2 180 -18 7 771 1002 320 64 64 chr13 24385732 24386266 -95898046 + RMER5 LTR ERV1 1 534 0 7 771 506 198 99 0 chr13 24386592 24386693 -95897619 + PB1D7 SINE Alu 10 120 0 7 771 189 0 0 0 chr13 24386703 24386724 -95897588 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 771 570 79 0 0 chr13 24386724 24386813 -95897499 + (GA)n Simple_repeat Simple_repeat 1 89 0 7 771 684 260 45 57 chr13 24386815 24387060 -95897252 - Lx9 LINE L1 -182 7462 7221 7 771 1801 185 86 0 chr13 24387074 24387425 -95896887 - RLTR14 LTR ERV1 -1 381 1 7 771 1151 217 0 51 chr13 24387425 24387678 -95896634 - Lx9 LINE L1 -433 7211 6972 7 771 500 248 17 0 chr13 24387818 24387935 -95896377 + PB1D9 SINE Alu 2 120 0 7 771 252 0 0 0 chr13 24388042 24388070 -95896242 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 771 383 279 44 26 chr13 24388089 24388203 -95896109 - RSINE1 SINE B4 -43 122 7 7 771 180 0 0 0 chr13 24389456 24389476 -95894836 + (TC)n Simple_repeat Simple_repeat 2 21 0 7 771 548 146 51 56 chr13 24389476 24389672 -95894640 - RMER17C LTR ERVK -136 274 80 7 771 301 53 0 0 chr13 24389760 24389798 -95894514 - L1_Mur2 LINE L1 -3494 2383 2346 7 771 7023 127 4 39 chr13 24389779 24391275 -95893037 + Lx LINE L1 5191 6652 -2 7 771 552 30 0 0 chr13 24391307 24391373 -95892939 + (GA)n Simple_repeat Simple_repeat 1 66 0 7 771 250 327 19 38 chr13 24391375 24391480 -95892832 - PB1D10 SINE Alu -14 103 1 7 771 251 290 0 0 chr13 24391742 24391804 -95892508 - B4A SINE B4 -230 62 1 7 771 221 57 29 0 chr13 24392057 24392092 -95892220 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 7 771 377 203 264 8 chr13 24392095 24392224 -95892088 + MTD LTR MaLR 72 233 -188 7 771 793 70 9 0 chr13 24392201 24392316 -95891996 + B1_Mm SINE Alu 32 147 0 7 771 639 0 0 0 chr13 24392362 24392433 -95891879 + (GAAA)n Simple_repeat Simple_repeat 3 73 0 7 771 984 149 72 5 chr13 24392433 24392628 -95891684 + MTD LTR MaLR 203 410 -9 7 771 279 268 34 43 chr13 24392779 24392896 -95891416 - RMER5 LTR ERV1 -196 338 223 7 771 15940 16 2 0 chr13 24392896 24394698 -95889614 + L1Md_T LINE L1 3782 5586 -297 7 771 8696 28 0 0 chr13 24394698 24395693 -95888619 + L1Md_T LINE L1 5587 6581 -1 7 771 375 279 123 6 chr13 24395723 24395885 -95888427 - RMER5 LTR ERV1 -297 237 57 7 771 378 274 0 40 chr13 24395931 24396030 -95888282 - B3 SINE B2 -6 210 116 7 771 189 0 0 0 chr13 24396067 24396088 -95888224 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 7 771 1051 191 11 5 chr13 24396090 24396280 -95888032 - B3 SINE B2 -25 191 1 7 771 389 256 0 0 chr13 24396434 24396512 -95887800 - ID4_ SINE ID -4 79 2 8 771 211 186 40 79 chr13 24396516 24396592 -95887720 - B1F SINE Alu 0 149 77 8 771 22 0 0 0 chr13 24396626 24396648 -95887664 + AT_rich Low_complexity Low_complexity 1 22 0 8 771 266 316 10 37 chr13 24396676 24396784 -95887528 - PB1D9 SINE Alu -11 109 2 8 771 387 279 26 43 chr13 24396888 24397004 -95887308 + RSINE1 SINE B4 11 124 -41 8 771 243 0 0 0 chr13 24397006 24397033 -95887279 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 771 22 35 0 0 chr13 24397038 24397067 -95887245 + AT_rich Low_complexity Low_complexity 1 29 0 8 771 445 263 8 8 chr13 24398089 24398208 -95886104 - PB1D7 SINE Alu -1 119 1 8 771 2377 135 27 3 chr13 24398437 24398808 -95885504 + RLTR14 LTR ERV1 1 380 -2 8 771 502 275 7 42 chr13 24399613 24399757 -95884555 + ID_B1 SINE B4 86 224 0 8 771 195 100 0 0 chr13 24399759 24399789 -95884523 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 8 771 618 250 0 0 chr13 24399792 24399916 -95884396 + B1_Mur1 SINE Alu 3 126 -23 8 771 23 33 0 0 chr13 24399922 24399952 -95884360 + AT_rich Low_complexity Low_complexity 1 30 0 8 771 569 211 28 0 chr13 24400036 24400145 -95884167 + B3A SINE B2 15 126 -72 8 771 420 55 0 0 chr13 24400203 24400258 -95884054 + (GGA)n Simple_repeat Simple_repeat 3 57 0 8 771 570 29 0 0 chr13 24400999 24401067 -95883245 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 8 771 290 257 27 0 chr13 24401281 24401355 -95882957 + ID4 SINE ID 7 82 -1 8 771 195 129 0 0 chr13 24401355 24401386 -95882926 + (TAGA)n Simple_repeat Simple_repeat 2 32 0 8 771 686 79 0 19 chr13 24401595 24401698 -95882614 + (GGAA)n Simple_repeat Simple_repeat 3 103 0 8 771 1350 108 0 15 chr13 24401701 24401899 -95882413 + B2_Mm2 SINE B2 1 195 0 8 771 1082 92 0 0 chr13 24402032 24402173 -95882139 + B1_Mus1 SINE Alu 1 141 -7 8 771 644 277 7 20 chr13 24403145 24403296 -95881016 - ID_B1 SINE B4 -2 222 74 8 771 1157 62 0 14 chr13 24403362 24403510 -95880802 - B1_Mm SINE Alu 0 147 2 8 771 423 0 0 0 chr13 24403692 24403739 -95880573 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 771 986 263 32 20 chr13 24403742 24403990 -95880322 - B4A SINE B4 -40 252 2 8 771 391 250 26 9 chr13 24404075 24404188 -95880124 - ORR1E LTR MaLR -239 120 6 8 771 51 0 0 0 chr13 24404448 24404499 -95879813 + AT_rich Low_complexity Low_complexity 1 51 0 8 771 570 210 41 27 chr13 24404868 24405015 -95879297 + B1F SINE Alu 1 149 0 8 771 2982 36 16 0 chr13 24405048 24405411 -95878901 - MusHAL1 LINE L1 -1133 1579 1211 8 771 8612 54 21 3 chr13 24405408 24406538 -95877774 + MusHAL1 LINE L1 1563 2712 0 8 771 210 305 0 17 chr13 24406727 24406787 -95877525 + CT-rich Low_complexity Low_complexity 5 63 0 8 771 279 0 0 0 chr13 24406787 24406818 -95877494 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 8 771 2826 189 27 281 chr13 24406818 24408155 -95876157 - RMER1A Other Other -26 1040 15 8 771 296 305 37 0 chr13 24408729 24408811 -95875501 - B1_Mur1 SINE Alu -23 126 42 8 771 325 155 0 65 chr13 24408875 24408937 -95875375 - PB1D9 SINE Alu -61 59 2 8 771 500 297 16 0 chr13 24408942 24409088 -95875224 - B1F1 SINE Alu 0 149 2 8 771 258 257 71 27 chr13 24409133 24409245 -95875067 - PB1D9 SINE Alu -3 117 1 8 771 1309 61 5 22 chr13 24409531 24409715 -95874597 + L1Md_F2 LINE L1 6402 6582 0 8 771 2147 148 82 3 chr13 24409754 24410119 -95874193 - ORR1B1 LTR MaLR 0 394 1 8 771 741 244 23 0 chr13 24410123 24410295 -95874017 + MTD LTR MaLR 15 190 -229 8 771 798 203 82 226 chr13 24410302 24410430 -95873882 + Lx9 LINE L1 6389 6522 -1122 8 771 227 314 0 0 chr13 24410430 24410500 -95873812 + B1F SINE Alu 2 71 -78 8 771 798 203 82 226 chr13 24410500 24410678 -95873634 + Lx9 LINE L1 6523 6710 -934 8 771 807 176 41 98 chr13 24410944 24411190 -95873122 + Lx9 LINE L1 7405 7636 -8 8 771 1480 160 6 23 chr13 24411259 24411535 -95872777 - L1Md_F3 LINE L1 -821 5763 5461 8 771 755 207 0 11 chr13 24411540 24411716 -95872596 + (CATA)n Simple_repeat Simple_repeat 2 175 0 8 771 603 293 6 6 chr13 24411749 24411907 -95872405 + RSINE1 SINE B4 4 161 -4 8 771 652 243 167 6 chr13 24412661 24412835 -95871477 - B3 SINE B2 -9 207 6 8 771 361 220 88 0 chr13 24412858 24412949 -95871363 - PB1 SINE Alu -8 119 21 8 771 209 33 33 0 chr13 24413000 24413030 -95871282 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 8 771 449 318 83 38 chr13 24413118 24413275 -95871037 - RSINE1 SINE B4 0 165 2 8 771 308 190 60 48 chr13 24413473 24413556 -95870756 + PB1 SINE Alu 1 84 -33 8 771 283 226 36 89 chr13 24413556 24413585 -95870727 + ID_B1 SINE B4 82 187 -37 8 771 2219 106 25 9 chr13 24413585 24413909 -95870403 - ORR1A4 LTR MaLR 0 329 1 8 771 4563 117 43 112 chr13 24413909 24414884 -95869428 - ORR1A4-int LTR MaLR 0 1963 1056 8 771 802 110 16 8 chr13 24414876 24415004 -95869308 - ORR1A4 LTR MaLR -200 129 1 8 771 1014 194 3 0 chr13 24415036 24415328 -95868984 + GA-rich Low_complexity Low_complexity 1 292 0 8 771 220 241 93 0 chr13 24415337 24415391 -95868921 + ID SINE ID 24 82 -142 8 771 221 298 63 11 chr13 24415459 24415554 -95868758 + PB1D7 SINE Alu 21 120 0 8 771 3453 47 2 14 chr13 24415596 24416026 -95868286 - L1_Mus1 LINE L1 0 6567 6143 8 771 401 200 33 0 chr13 24416887 24416977 -95867335 - PB1D7 SINE Alu -6 114 22 8 771 860 301 60 35 chr13 24417436 24417980 -95866332 - MuLV-int LTR ERV1 -126 7652 7158 8 771 376 322 5 5 chr13 24419357 24419515 -95864797 - MuLV-int LTR ERV1 -2092 5686 5510 8 771 4684 324 70 51 chr13 24419647 24423460 -95860852 - MuLV-int LTR ERV1 -2296 5310 1427 8 771 277 297 27 0 chr13 24423490 24423564 -95860748 - ID_B1 SINE B4 -6 218 143 8 771 701 232 0 28 chr13 24423614 24423756 -95860556 - RSINE1 SINE B4 -17 148 11 8 771 541 208 0 0 chr13 24424231 24424332 -95859980 + B1F SINE Alu 5 105 -44 8 771 567 279 101 54 chr13 24425042 24425319 -95858993 - B4 SINE B4 -1 291 2 8 771 9116 199 40 53 chr13 24425341 24427786 -95856526 - Lx7 LINE L1 0 7696 5284 8 771 2835 139 6 31 chr13 24428088 24428572 -95855740 - Lx7 LINE L1 -581 5299 4828 8 771 551 240 41 0 chr13 24429229 24429350 -95854962 + ID_B1 SINE B4 90 215 -9 8 771 290 278 50 93 chr13 24429350 24429368 -95854944 + B1_Mur3 SINE Alu 9 141 -8 8 771 834 261 200 20 chr13 24429455 24429697 -95854615 - MTEa LTR MaLR -19 360 79 8 771 288 0 0 0 chr13 24429697 24429729 -95854583 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 771 834 261 200 20 chr13 24429729 24429791 -95854521 - MTEa LTR MaLR -301 78 1 8 771 845 263 107 85 chr13 24430110 24430476 -95853836 - MTEa LTR MaLR 0 379 6 8 771 238 325 97 26 chr13 24430624 24430779 -95853533 - LTR16E2 LTR ERVL -199 369 204 8 771 882 110 31 0 chr13 24431135 24431262 -95853050 + B1_Mur4 SINE Alu 1 131 -19 8 771 593 249 96 28 chr13 24431423 24431601 -95852711 - B3A SINE B2 -1 197 8 8 771 482 276 56 51 chr13 24431651 24431846 -95852466 - B3A SINE B2 0 198 3 8 771 793 250 84 111 chr13 24432115 24432273 -95852039 - RMER2 LTR ERV1 -42 525 360 8 771 3403 170 185 75 chr13 24432273 24433083 -95851229 - RMER19B LTR ERVK 0 902 4 8 771 793 230 148 68 chr13 24433083 24433331 -95850981 - RMER2 LTR ERV1 -208 359 8 8 771 404 266 81 109 chr13 24433321 24433737 -95850575 + RLTR11B LTR ERVK 51 467 -60 8 771 2039 196 112 11 chr13 24434419 24434894 -95849418 + RLTR11A2 LTR ERVK 1 523 -4 8 771 33541 84 20 3 chr13 24434947 24438512 -95845800 + L1Md_F2 LINE L1 189 3802 -2081 8 771 1718 28 33 0 chr13 24438512 24438723 -95845589 - L1Md_F3 LINE L1 -14 6570 6353 8 771 33541 68 6 3 chr13 24438723 24440486 -95843826 + L1Md_F2 LINE L1 3803 5586 -297 8 771 7799 62 8 6 chr13 24440486 24441476 -95842836 + L1Md_F2 LINE L1 5587 6578 -4 8 771 290 299 0 0 chr13 24441707 24441804 -95842508 + MYSERV6-int LTR ERVK 805 901 -8058 8 771 827 296 25 48 chr13 24441806 24442122 -95842190 + MYSERV-int LTR ERVK 3769 4077 -2473 8 771 872 223 34 14 chr13 24442115 24442324 -95841988 + MYSERV-int LTR ERVK 4206 4418 -2132 8 771 1279 239 73 16 chr13 24442339 24442836 -95841476 + RMER19A LTR ERVK 1 663 -74 8 771 487 173 8 83 chr13 24442915 24443035 -95841277 + MYSERV6-int LTR ERVK 7856 7966 -993 8 771 2308 75 8 91 chr13 24443037 24443420 -95840892 + MT2B LTR ERVL 202 552 -49 8 771 1647 160 0 17 chr13 24443420 24443719 -95840593 + RLTR19C LTR ERVK 1 294 -212 8 771 2017 82 17 99 chr13 24443710 24444061 -95840251 + MT2B LTR ERVL 231 552 -49 8 771 2017 163 0 11 chr13 24444061 24444426 -95839886 + RLTR19C LTR ERVK 1 361 -145 8 771 1530 227 11 52 chr13 24444437 24444804 -95839508 + MERVL_2A-int LTR ERVL 5 356 -5405 8 771 20860 130 32 13 chr13 24444804 24448054 -95836258 + MERVL_2A-int LTR ERVL 2332 5752 -9 8 771 3630 112 27 40 chr13 24448055 24448657 -95835655 + MT2B LTR ERVL 6 599 -2 8 771 251 259 17 0 chr13 24448689 24448747 -95835565 - PB1D7 SINE Alu -61 59 1 8 771 1039 221 5 27 chr13 24449166 24449385 -95834927 + B3 SINE B2 2 215 -1 8 771 1036 218 0 61 chr13 24449385 24449615 -95834697 + B3 SINE B2 1 216 0 8 771 384 242 31 10 chr13 24449635 24449731 -95834581 - RSINE1 SINE B4 -2 163 66 8 771 531 0 0 0 chr13 24449855 24449914 -95834398 + (TC)n Simple_repeat Simple_repeat 2 60 0 8 771 333 0 0 0 chr13 24449914 24449950 -95834362 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 771 603 250 8 0 chr13 24449950 24450070 -95834242 - RSINE1 SINE B4 -41 124 4 8 771 462 313 0 0 chr13 24450094 24450209 -95834103 - ID_B1 SINE B4 -6 218 104 8 771 513 321 16 27 chr13 24450492 24450710 -95833602 - ID_B1 SINE B4 0 292 81 8 771 236 296 37 12 chr13 24451204 24451286 -95833026 - B1F SINE Alu 0 149 66 8 771 241 319 68 8 chr13 24451255 24451372 -95832940 - B1_Mur1 SINE Alu -22 127 4 8 771 234 352 32 16 chr13 24451262 24451386 -95832926 - ID_B1 SINE B4 -28 196 71 8 771 359 222 29 29 chr13 24451688 24451790 -95832522 + PB1D7 SINE Alu 19 120 0 8 771 774 201 14 0 chr13 24452008 24452147 -95832165 + B1_Mur2 SINE Alu 2 142 -7 8 771 237 65 0 0 chr13 24452151 24452182 -95832130 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 771 313 324 20 52 chr13 24452361 24452514 -95831798 + B1F SINE Alu 2 149 0 9 771 315 65 0 0 chr13 24452750 24452796 -95831516 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 771 690 218 101 31 chr13 24452799 24453026 -95831286 + L1MA8 LINE L1 5684 5926 -365 9 771 416 224 168 40 chr13 24453058 24453207 -95831105 - MLT1A1 LTR MaLR -12 396 229 9 771 852 101 0 0 chr13 24453216 24453345 -95830967 + (CCA)n Simple_repeat Simple_repeat 1 129 0 9 771 301 256 12 0 chr13 24453360 24453442 -95830870 + L1MA8 LINE L1 6209 6291 0 9 771 1283 91 29 0 chr13 24453448 24453623 -95830689 + B2_Mm1t SINE B2 2 181 -12 9 771 400 109 388 10 chr13 24453634 24453732 -95830580 + B2_Mm2 SINE B2 47 181 -14 9 771 3194 44 26 0 chr13 24453751 24454137 -95830175 - MTA_Mm LTR MaLR 0 396 1 9 771 291 278 94 26 chr13 24454557 24454749 -95829563 + L1MC5 LINE L1 7363 7567 -394 9 771 624 211 92 7 chr13 24454764 24454917 -95829395 - Lx5 LINE L1 0 7050 6885 9 771 22 0 0 0 chr13 24454989 24455011 -95829301 + AT_rich Low_complexity Low_complexity 1 22 0 9 771 1462 201 146 20 chr13 24455366 24455757 -95828555 - RMER10A LTR ERVL -2 440 1 9 771 1183 223 115 123 chr13 24455803 24456810 -95827502 - RLTR19-int LTR ERVK -2110 4027 2659 9 771 227 298 0 0 chr13 24456823 24456917 -95827395 + A-rich Low_complexity Low_complexity 1 94 0 9 771 340 296 9 27 chr13 24457021 24457132 -95827180 - MTEa LTR MaLR -1 378 270 9 771 674 190 125 9 chr13 24457182 24457408 -95826904 - RLTR30 LTR ERV1 -1 378 20 9 771 1675 172 46 91 chr13 24457455 24457916 -95826396 + RMER10A LTR ERVL 3 442 0 9 771 1086 275 39 106 chr13 24457950 24458544 -95825768 + MT2B LTR ERVL 1 554 -47 9 771 2431 98 3 21 chr13 24458578 24458911 -95825401 - ORR1A2 LTR MaLR 0 327 1 9 771 595 233 20 46 chr13 24459002 24459155 -95825157 - MTEa LTR MaLR -230 149 1 9 771 1466 256 126 14 chr13 24459442 24459949 -95824363 + Lx9 LINE L1 7081 7644 0 9 771 239 232 111 43 chr13 24460019 24460136 -95824176 - MIRb SINE MIR -29 239 115 9 771 6312 84 28 7 chr13 24460139 24461713 -95822599 + L1VL4 LINE L1 199 1800 -1759 9 771 6982 97 51 11 chr13 24461720 24462741 -95821571 + Lx2 LINE L1 5587 6648 -349 9 771 1567 93 5 0 chr13 24462736 24462952 -95821360 + Lx2 LINE L1 6775 6991 -6 9 771 266 301 52 31 chr13 24462986 24463082 -95821230 + MTE2b LTR MaLR 1 98 -281 9 771 558 219 0 26 chr13 24463365 24463482 -95820830 - B4 SINE B4 -138 154 41 9 771 711 112 0 0 chr13 24463584 24463709 -95820603 + (TC)n Simple_repeat Simple_repeat 1 125 0 9 771 372 43 0 0 chr13 24463709 24463755 -95820557 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 771 240 360 81 0 chr13 24463799 24463935 -95820377 + MLT1C LTR MaLR 250 396 -71 9 771 343 286 0 0 chr13 24464362 24464439 -95819873 + PB1D7 SINE Alu 37 113 -7 9 771 26 0 0 0 chr13 24464492 24464518 -95819794 + AT_rich Low_complexity Low_complexity 1 26 0 9 771 490 210 0 216 chr13 24464569 24464745 -95819567 - B3 SINE B2 -2 214 55 9 771 545 212 201 81 chr13 24465192 24465287 -95819025 - ORR1E LTR MaLR -5 354 261 9 771 1930 159 37 27 chr13 24465287 24465693 -95818619 + RMER17C LTR ERVK 1 410 0 9 771 545 212 201 81 chr13 24465693 24465895 -95818417 - ORR1E LTR MaLR -99 260 21 9 771 1439 78 127 0 chr13 24466674 24466918 -95817394 + RLTR10A LTR ERVK 137 411 0 9 771 870 268 65 15 chr13 24467180 24467442 -95816870 + B4 SINE B4 3 277 -15 9 771 723 152 138 0 chr13 24468289 24468427 -95815885 + RLTR30 LTR ERV1 1 157 -222 9 771 4439 124 36 5 chr13 24468428 24469211 -95815101 - MusHAL1 LINE L1 -1504 1208 402 9 771 1542 129 129 44 chr13 24469211 24469552 -95814760 - RMER16 LTR ERVK 0 533 164 9 771 668 215 10 111 chr13 24469545 24469744 -95814568 + RLTR30 LTR ERV1 195 373 -6 9 771 373 283 31 23 chr13 24469872 24470002 -95814310 - MER50-int LTR ERV1 -511 6694 6564 9 771 1846 157 21 48 chr13 24470874 24471295 -95813017 - RMER17C LTR ERVK 0 410 1 9 771 621 104 184 0 chr13 24471877 24472002 -95812310 - L1_Mus3 LINE L1 0 6638 6491 9 771 1761 54 0 0 chr13 24472000 24472221 -95812091 + L1_Mus3 LINE L1 5717 5937 -701 9 771 22 56 0 0 chr13 24472415 24472451 -95811861 + AT_rich Low_complexity Low_complexity 1 36 0 9 771 285 115 39 0 chr13 24472552 24472630 -95811682 + A-rich Low_complexity Low_complexity 2 82 0 9 771 258 152 0 0 chr13 24473993 24474039 -95810273 - MURVY-int LTR ERV1 -3248 4204 4159 9 771 1856 173 55 22 chr13 24475179 24475545 -95808767 + RLTR30 LTR ERV1 1 378 -1 9 771 789 300 85 19 chr13 24475597 24476133 -95808179 + L1M2 LINE L1 4948 5521 -779 9 771 310 238 0 0 chr13 24476218 24476302 -95808010 + (TA)n Simple_repeat Simple_repeat 2 85 0 9 771 450 294 66 0 chr13 24476328 24476464 -95807848 - L1M3 LINE L1 -385 5786 5642 9 771 276 149 0 0 chr13 24476464 24476511 -95807801 + (TA)n Simple_repeat Simple_repeat 1 47 0 9 771 293 162 74 46 chr13 24476542 24476717 -95807595 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 9 771 574 258 15 0 chr13 24476759 24476891 -95807421 + B1F SINE Alu 15 148 -1 9 771 907 231 241 27 chr13 24476930 24477184 -95807128 - RMER4B LTR ERVK -9 576 247 9 771 185 83 0 27 chr13 24477184 24477221 -95807091 + (CAG)n Simple_repeat Simple_repeat 2 37 0 9 771 907 191 67 48 chr13 24477221 24477429 -95806883 - RMER4B LTR ERVK -339 246 21 9 771 259 113 19 19 chr13 24477890 24477944 -95806368 + CT-rich Low_complexity Low_complexity 5 58 0 9 771 246 62 0 0 chr13 24477984 24478016 -95806296 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 9 771 538 202 55 0 chr13 24478058 24478167 -95806145 - B1F SINE Alu -22 127 13 9 771 233 250 77 77 chr13 24478063 24478180 -95806132 - MT2B2 LTR ERVL -306 278 162 9 771 415 236 95 24 chr13 24478640 24478766 -95805546 - ID_B1 SINE B4 -4 220 86 9 771 249 286 53 73 chr13 24478905 24479167 -95805145 - RLTR15 LTR ERVK -67 292 48 9 771 10349 42 8 1 chr13 24479719 24481655 -95802657 - L1Md_F3 LINE L1 0 6584 4634 9 771 2665 46 0 24 chr13 24481648 24481712 -95802600 + L1_Mm LINE L1 4301 4358 -1525 9 771 6527 33 0 0 chr13 24481712 24482468 -95801844 - L1Md_T LINE L1 0 6582 5827 9 771 2665 46 0 24 chr13 24482468 24482738 -95801574 + L1_Mm LINE L1 4359 4627 -1256 9 771 455 232 27 0 chr13 24482809 24482921 -95801391 - ID_B1 SINE B4 -11 213 99 9 771 236 217 0 0 chr13 24483106 24483152 -95801160 + T-rich Low_complexity Low_complexity 1 46 0 9 771 744 115 0 0 chr13 24483152 24483265 -95801047 + (TC)n Simple_repeat Simple_repeat 2 114 0 9 771 433 209 0 62 chr13 24483425 24483537 -95800775 + B1F1 SINE Alu 45 149 0 9 771 237 65 0 0 chr13 24483537 24483568 -95800744 + (A)n Simple_repeat Simple_repeat 1 31 0 9 771 489 327 66 42 chr13 24484065 24484490 -95799822 + L1ME3 LINE L1 5559 5993 -169 9 771 595 295 9 74 chr13 24484554 24484770 -95799542 - B3A SINE B2 -13 203 2 9 771 385 246 17 60 chr13 24484914 24485031 -95799281 + PB1D7 SINE Alu 8 119 -1 9 771 234 340 55 9 chr13 24485532 24485642 -95798670 - PB1D7 SINE Alu -3 117 3 9 771 277 283 22 42 chr13 24485672 24485934 -95798378 - RSINE1 SINE B4 -20 272 3 9 771 252 86 0 0 chr13 24485993 24486028 -95798284 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 771 484 272 32 0 chr13 24486031 24486156 -95798156 - B1F SINE Alu -20 129 1 9 771 797 133 0 0 chr13 24486289 24486409 -95797903 - B3 SINE B2 -95 121 2 9 771 1042 64 0 0 chr13 24486696 24486837 -95797475 + B1_Mus2 SINE Alu 7 147 0 9 771 324 0 0 0 chr13 24487381 24487417 -95796895 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 771 261 284 14 0 chr13 24487431 24487505 -95796807 - ID_B1 SINE B4 -7 217 143 9 771 235 33 0 0 chr13 24487503 24487533 -95796779 - U2 snRNA snRNA -152 36 7 9 771 318 306 12 0 chr13 24487530 24487615 -95796697 - ID_B1 SINE B4 -58 166 81 9 771 500 281 70 19 chr13 24488854 24489010 -95795302 + RSINE1 SINE B4 2 165 0 9 771 480 62 0 0 chr13 24489542 24489606 -95794706 + (TC)n Simple_repeat Simple_repeat 1 64 0 9 771 726 281 38 23 chr13 24489652 24489918 -95794394 - B4A SINE B4 -22 270 1 9 771 264 348 42 0 chr13 24491232 24491350 -95792962 + PB1 SINE Alu 3 125 -2 9 771 367 250 52 8 chr13 24491514 24491619 -95792693 - B1F2 SINE Alu -5 112 6 9 771 29 0 0 0 chr13 24491642 24491671 -95792641 + AT_rich Low_complexity Low_complexity 1 29 0 9 771 597 28 0 0 chr13 24491857 24491928 -95792384 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 9 771 333 0 0 0 chr13 24492216 24492253 -95792059 + (A)n Simple_repeat Simple_repeat 1 37 0 9 771 452 268 58 7 chr13 24492724 24492863 -95791449 - B3A SINE B2 -15 183 38 9 771 214 146 0 40 chr13 24493064 24493114 -95791198 + A-rich Low_complexity Low_complexity 5 52 0 9 771 210 37 0 0 chr13 24493535 24493562 -95790750 + (A)n Simple_repeat Simple_repeat 1 27 0 9 771 915 222 32 85 chr13 24493641 24493981 -95790331 - RLTRETN_Mm LTR ERVK 0 322 1 9 771 447 204 7 29 chr13 24494645 24494781 -95789531 + CT-rich Low_complexity Low_complexity 3 135 0 9 771 435 38 0 0 chr13 24494781 24494834 -95789478 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 771 919 218 175 23 chr13 24494884 24495232 -95789080 + RMER4B LTR ERVK 17 417 -168 9 771 229 253 12 48 chr13 24495245 24495328 -95788984 + RMER4B LTR ERVK 491 570 -15 9 771 447 19 0 0 chr13 24495337 24495389 -95788923 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 771 293 254 16 0 chr13 24495625 24495688 -95788624 - PB1D9 SINE Alu -43 77 14 9 771 1464 54 43 0 chr13 24495777 24495962 -95788350 + B2_Mm2 SINE B2 2 194 -1 9 771 1286 311 30 34 chr13 24496134 24496776 -95787536 + Lx9 LINE L1 6813 7472 -1 9 771 879 209 65 28 chr13 24497292 24497382 -95786930 - RLTR16 LTR ERVK 0 505 417 1 771 399 73 0 0 chr13 24497382 24497437 -95786875 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 771 879 209 65 28 chr13 24497437 24497562 -95786750 - RLTR16 LTR ERVK -89 416 283 1 771 286 167 16 16 chr13 24497564 24497625 -95786687 - MTEb LTR MaLR -155 224 164 1 771 466 29 57 0 chr13 24497625 24497721 -95786591 - L1Md_F3 LINE L1 0 6584 6511 1 771 243 217 188 0 chr13 24497741 24497810 -95786502 - MTEb LTR MaLR -205 174 93 1 771 244 146 40 40 chr13 24498023 24498073 -95786239 + ORR1A4 LTR MaLR 1 50 -279 1 771 307 311 59 29 chr13 24498370 24498506 -95785806 + MER21-int LTR ERV1 3104 3243 -948 1 771 231 310 11 11 chr13 24498605 24498693 -95785619 + CT-rich Low_complexity Low_complexity 3 90 0 1 771 1550 286 72 35 chr13 24498696 24499319 -95784993 + MER21-int LTR ERV1 3491 4136 -55 1 771 351 0 0 0 chr13 24499439 24499478 -95784834 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 771 450 36 0 0 chr13 24499478 24499533 -95784779 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 771 900 173 0 0 chr13 24499680 24499859 -95784453 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 1 771 4520 14 0 0 chr13 24500064 24500557 -95783755 - MT2_Mm LTR ERVL 0 493 1 1 771 942 266 61 20 chr13 24500617 24500912 -95783400 - L1MA6 LINE L1 -60 6240 5934 2 771 512 152 76 0 chr13 24500908 24501000 -95783312 - L1VL4 LINE L1 -6014 288 190 3 771 1365 91 16 0 chr13 24501206 24501392 -95782920 - B2_Mm2 SINE B2 -6 189 1 4 771 682 270 0 0 chr13 24501537 24501700 -95782612 - RSINE1 SINE B4 0 165 3 5 771 334 184 191 30 chr13 24501749 24501854 -95782458 - L1M4 LINE L1 -2537 3609 3492 6 771 277 253 70 53 chr13 24502408 24502579 -95781733 - L1M4 LINE L1 -2641 3505 3332 6 771 2241 191 102 21 chr13 24502973 24503077 -95781235 - RMER1B Other Other 0 1066 953 7 771 1137 128 0 0 chr13 24503077 24503257 -95781055 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 771 2241 191 102 21 chr13 24503257 24503632 -95780680 - RMER1B Other Other -114 952 548 7 771 513 333 53 53 chr13 24503792 24504078 -95780234 - L1M5 LINE L1 -409 5755 5473 9 771 302 0 26 0 chr13 24504078 24504116 -95780196 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 771 1108 64 14 0 chr13 24504116 24504256 -95780056 - B1_Mus1 SINE Alu -5 143 2 1 771 513 333 53 53 chr13 24504256 24504462 -95779850 - L1M5 LINE L1 -692 5472 5263 9 771 402 21 0 0 chr13 24504603 24504650 -95779662 + (TGG)n Simple_repeat Simple_repeat 1 47 0 1 771 3117 204 67 40 chr13 24504716 24505450 -95778862 - RMER1C Other Other 0 1342 589 1 771 245 260 68 0 chr13 24505461 24505534 -95778778 - L1M4 LINE L1 -2789 3357 3280 6 771 572 306 94 0 chr13 24505540 24505720 -95778592 + Tigger5 DNA MER2_type 28 224 -2182 1 771 384 22 0 0 chr13 24505738 24505783 -95778529 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 771 339 166 29 11 chr13 24505839 24505928 -95778384 - RLTR19-int LTR ERVK -5170 967 903 1 771 234 164 0 43 chr13 24507041 24507111 -95777201 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 1 771 223 311 19 9 chr13 24507216 24507323 -95776989 + GA-rich Low_complexity Low_complexity 1 108 0 1 771 353 333 0 0 chr13 24507400 24507505 -95776807 + ID_B1 SINE B4 116 220 -4 1 771 594 170 0 0 chr13 24509625 24509772 -95774540 + (CA)n Simple_repeat Simple_repeat 1 147 0 2 771 338 55 17 85 chr13 24509772 24509831 -95774481 + HAL1-3A_ME LINE L1 1976 2030 -828 2 772 192 40 0 0 chr13 24510629 24510654 -95773658 + (CCTG)n Simple_repeat Simple_repeat 2 26 0 2 772 220 318 15 0 chr13 24510669 24510735 -95773577 + MIR SINE MIR 86 152 -56 2 772 771 249 10 16 chr13 24510751 24510943 -95773369 + B4A SINE B4 25 215 -77 2 772 24 0 0 0 chr13 24511233 24511257 -95773055 + AT_rich Low_complexity Low_complexity 1 24 0 2 772 662 266 88 46 chr13 24511678 24511938 -95772374 - B4A SINE B4 -19 273 3 2 772 227 272 12 24 chr13 24512274 24512357 -95771955 + CT-rich Low_complexity Low_complexity 1 82 0 2 772 741 33 0 0 chr13 24512615 24512707 -95771605 + (TTCC)n Simple_repeat Simple_repeat 1 92 0 2 772 329 322 43 0 chr13 24512928 24513043 -95771269 + PB1D7 SINE Alu 1 120 0 2 772 367 309 41 0 chr13 24513069 24513192 -95771120 + ID_B1 SINE B4 91 218 -6 3 772 555 66 0 0 chr13 24513206 24513282 -95771030 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 3 772 783 179 75 0 chr13 24513485 24513619 -95770693 + B1_Mur3 SINE Alu 1 144 -5 3 772 387 0 0 0 chr13 24513623 24513666 -95770646 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 3 772 1208 91 6 0 chr13 24513668 24513844 -95770468 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 3 772 1098 311 54 24 chr13 24514725 24515350 -95768962 - L1M2 LINE L1 -767 5376 4733 3 772 2944 237 149 69 chr13 24515410 24517078 -95767234 - RLTR22_Mur LTR ERVK -42 1766 1 3 772 511 288 143 106 chr13 24517079 24517693 -95766619 - L1M2 LINE L1 -1735 4405 3769 3 772 410 213 9 17 chr13 24517708 24517853 -95766459 + L1M4 LINE L1 3654 3794 -2352 3 772 195 42 0 0 chr13 24517930 24517954 -95766358 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 3 772 431 292 100 0 chr13 24518511 24518631 -95765681 + B1F1 SINE Alu 10 141 -8 3 772 360 133 33 0 chr13 24519048 24519108 -95765204 - Lx6 LINE L1 -413 7047 6986 4 772 352 202 25 0 chr13 24519110 24519189 -95765123 - ID_B1 SINE B4 -62 162 82 4 772 765 256 172 9 chr13 24519553 24519785 -95764527 + B4 SINE B4 14 283 -9 4 772 195 42 0 0 chr13 24519816 24519840 -95764472 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 772 212 0 36 0 chr13 24520023 24520051 -95764261 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 4 772 478 171 0 0 chr13 24520127 24520209 -95764103 - MTEa LTR MaLR -4 375 294 4 772 384 206 16 8 chr13 24520893 24521020 -95763292 + (TA)n Simple_repeat Simple_repeat 1 128 0 4 772 229 257 77 34 chr13 24521376 24521493 -95762819 - MTEa LTR MaLR -213 146 25 4 772 585 230 43 36 chr13 24522612 24522752 -95761560 - ID_B1 SINE B4 -3 221 81 4 772 198 0 0 0 chr13 24523023 24523045 -95761267 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 772 392 227 23 0 chr13 24523052 24523140 -95761172 + PB1D10 SINE Alu 21 110 -7 4 772 244 290 92 18 chr13 24523403 24523512 -95760800 - PB1D10 SINE Alu 0 117 1 5 772 2493 231 195 30 chr13 24523518 24523824 -95760488 - Lx6 LINE L1 -4 7456 7127 5 772 1026 88 19 0 chr13 24523824 24523984 -95760328 + (TA)n Simple_repeat Simple_repeat 2 164 0 5 772 2493 246 138 34 chr13 24523984 24524727 -95759585 - Lx6 LINE L1 -334 7126 5973 5 772 650 227 286 4 chr13 24524925 24525188 -95759124 - ORR1D2 LTR MaLR -3 367 31 5 772 803 102 0 52 chr13 24525202 24525336 -95758976 + B1_Mur4 SINE Alu 22 148 -2 5 772 23 0 0 0 chr13 24525825 24525848 -95758464 + AT_rich Low_complexity Low_complexity 1 23 0 5 772 413 261 9 43 chr13 24525934 24526050 -95758262 + PB1D10 SINE Alu 5 116 -1 5 772 197 33 0 32 chr13 24526050 24526081 -95758231 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 5 772 336 208 38 172 chr13 24526425 24526464 -95757848 + MT2B LTR ERVL 125 142 -459 5 772 749 148 14 82 chr13 24526464 24526611 -95757701 + B1_Mur4 SINE Alu 1 137 -13 5 772 514 254 37 0 chr13 24527858 24527992 -95756320 + ID_B1 SINE B4 84 222 -2 6 772 234 0 0 0 chr13 24528340 24528366 -95755946 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 772 2917 245 77 19 chr13 24529975 24530131 -95754181 - RCHARR1 DNA MER1_type 0 974 817 6 772 270 0 0 0 chr13 24530131 24530161 -95754151 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 772 2917 245 77 19 chr13 24530161 24530922 -95753390 - RCHARR1 DNA MER1_type -158 816 3 6 772 343 311 39 38 chr13 24531259 24531462 -95752850 - MLT1B LTR MaLR -257 210 1 6 772 21 0 0 0 chr13 24531548 24531569 -95752743 + AT_rich Low_complexity Low_complexity 1 21 0 6 772 480 312 0 68 chr13 24531586 24531734 -95752578 - RSINE1 SINE B4 0 165 28 6 772 867 269 48 10 chr13 24531830 24532142 -95752170 + Charlie5 DNA MER1_type 2054 2377 -247 6 772 25 31 0 0 chr13 24532214 24532246 -95752066 + AT_rich Low_complexity Low_complexity 1 32 0 6 772 895 288 112 4 chr13 24532255 24532513 -95751799 + B4A SINE B4 6 291 -1 6 772 1180 61 0 20 chr13 24532803 24532953 -95751359 - B1_Mus1 SINE Alu 0 148 2 7 772 1577 186 94 6 chr13 24532953 24533294 -95751018 - ORR1D1 LTR MaLR -3 371 1 7 772 454 304 7 7 chr13 24533665 24533801 -95750511 - B1F2 SINE Alu -13 136 1 7 772 400 267 33 0 chr13 24534261 24534351 -95749961 + PB1D7 SINE Alu 19 111 -9 7 772 394 330 0 0 chr13 24535118 24535233 -95749079 - PB1D10 SINE Alu -2 115 1 7 772 418 282 19 19 chr13 24535699 24535828 -95748484 - PB1D10 SINE Alu -19 128 6 7 772 747 33 0 0 chr13 24535861 24535951 -95748361 + (TC)n Simple_repeat Simple_repeat 1 90 0 7 772 257 241 37 25 chr13 24536291 24536372 -95747940 - PB1D7 SINE Alu -1 119 38 7 772 741 304 124 37 chr13 24536562 24537751 -95746561 + L1MEf LINE L1 691 1961 -4679 7 772 594 338 4 21 chr13 24537930 24538166 -95746146 + MLT1B LTR MaLR 1 232 -158 7 772 285 268 136 91 chr13 24538352 24538594 -95745718 + L1MEf LINE L1 2304 2556 -4084 7 772 441 0 0 0 chr13 24538766 24538815 -95745497 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 772 708 326 149 10 chr13 24538866 24539455 -95744857 + L1MEf LINE L1 2715 3385 -3159 7 772 254 267 92 37 chr13 24539872 24539981 -95744331 + PB1D10 SINE Alu 3 117 0 8 772 251 249 293 49 chr13 24540105 24540505 -95743807 + L1MC LINE L1 3332 3825 -2321 8 772 234 232 35 35 chr13 24540536 24540621 -95743691 + B4A SINE B4 2 86 -206 8 772 216 0 0 0 chr13 24540621 24540645 -95743667 + (A)n Simple_repeat Simple_repeat 1 24 0 8 772 292 215 46 0 chr13 24540872 24540937 -95743375 + L1MEf LINE L1 4258 4325 -2219 7 772 21 0 0 0 chr13 24541128 24541149 -95743163 + AT_rich Low_complexity Low_complexity 1 21 0 8 772 300 151 0 0 chr13 24541301 24541354 -95742958 + B1F2 SINE Alu 2 54 -95 8 772 429 20 0 0 chr13 24541356 24541406 -95742906 + (TCC)n Simple_repeat Simple_repeat 2 51 0 8 772 270 0 0 0 chr13 24541481 24541511 -95742801 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 772 345 291 68 121 chr13 24541558 24541831 -95742481 - B4A SINE B4 -27 265 3 8 772 1008 279 116 22 chr13 24541860 24542308 -95742004 - Lx8 LINE L1 -7 7466 6977 9 772 1409 186 90 101 chr13 24542308 24542696 -95741616 - ORR1C2 LTR MaLR 0 384 1 9 772 1265 186 30 20 chr13 24542696 24542993 -95741319 - ORR1C2-int LTR MaLR 0 1509 1210 9 772 953 272 129 22 chr13 24542987 24543390 -95740922 - ORR1C2-int LTR MaLR -477 893 448 9 772 309 136 0 0 chr13 24543419 24543463 -95740849 + Lx7 LINE L1 5697 5740 -1956 9 772 747 234 194 10 chr13 24543467 24543777 -95740535 - L1_Mur3 LINE L1 -279 5601 5260 9 772 207 69 0 0 chr13 24543795 24543824 -95740488 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 9 772 260 245 148 19 chr13 24543979 24544087 -95740225 + L1MEf LINE L1 5959 6080 -677 7 772 228 236 48 18 chr13 24544142 24544212 -95740100 - PB1D7 SINE Alu -46 71 1 9 772 248 312 82 14 chr13 24544385 24544531 -95739781 + L1MC3 LINE L1 5847 6002 -1783 9 772 299 267 40 0 chr13 24544863 24544938 -95739374 - RSINE1 SINE B4 -39 126 49 9 772 545 133 37 19 chr13 24545726 24545833 -95738479 + RLTR31_Mm LTR ERVK 1 109 -452 9 772 411 244 20 82 chr13 24545827 24545974 -95738338 + RLTR31_Mm LTR ERVK 424 561 0 9 772 388 272 39 16 chr13 24546035 24546162 -95738150 + B1F2 SINE Alu 5 134 -15 1 772 827 160 0 27 chr13 24546541 24546689 -95737623 + B1_Mur3 SINE Alu 5 148 -1 1 772 944 244 46 4 chr13 24546998 24547261 -95737051 + B4A SINE B4 15 288 -4 1 772 393 22 0 0 chr13 24547265 24547311 -95737001 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 772 869 132 11 22 chr13 24547761 24547939 -95736373 + A-rich Low_complexity Low_complexity 4 179 0 1 772 348 195 161 11 chr13 24549073 24549178 -95735134 + PB1D7 SINE Alu 1 119 -1 1 772 377 270 11 0 chr13 24549310 24549399 -95734913 + B3A SINE B2 1 90 -108 1 772 469 216 44 97 chr13 24549864 24549977 -95734335 + PB1D7 SINE Alu 1 107 -13 1 772 407 236 47 16 chr13 24551477 24551606 -95732706 - RMER15 LTR ERVL -14 561 429 1 772 8507 113 17 126 chr13 24552758 24553678 -95730634 - RLTR21 LTR ERVK 0 1572 825 1 772 1166 62 0 7 chr13 24553678 24553825 -95730487 + B1_Mm SINE Alu 2 147 0 1 772 8507 113 17 126 chr13 24553825 24554668 -95729644 - RLTR21 LTR ERVK -748 824 1 1 772 286 224 15 0 chr13 24554740 24554807 -95729505 + ID4_ SINE ID 3 70 -13 1 772 720 248 0 13 chr13 24555479 24555498 -95728814 - RSINE1 SINE B4 -6 159 142 1 772 441 110 0 0 chr13 24555498 24555571 -95728741 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 772 720 248 0 13 chr13 24555571 24555710 -95728602 - RSINE1 SINE B4 -24 141 3 1 772 319 230 52 26 chr13 24556219 24556335 -95727977 + CT-rich Low_complexity Low_complexity 2 120 0 1 772 1168 251 152 34 chr13 24556335 24556810 -95727502 - RMER5 LTR ERV1 0 534 4 1 772 198 0 0 0 chr13 24558164 24558186 -95726126 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 772 289 261 132 16 chr13 24558244 24558365 -95725947 - MIR SINE MIR -12 250 116 1 772 227 282 126 23 chr13 24558891 24558978 -95725334 - PB1D7 SINE Alu -1 119 24 1 772 484 296 25 25 chr13 24559239 24559402 -95724910 + RSINE1 SINE B4 3 165 0 1 772 461 319 0 7 chr13 24559558 24559697 -95724615 - B1F SINE Alu -10 139 2 1 772 974 264 60 11 chr13 24561069 24561337 -95722975 + B4A SINE B4 2 282 -10 1 772 1067 217 100 11 chr13 24561461 24561731 -95722581 - MTEb LTR MaLR -23 356 63 1 772 226 295 0 0 chr13 24561944 24562005 -95722307 + ID4 SINE ID 1 61 -22 1 772 396 0 0 0 chr13 24562007 24562051 -95722261 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 772 2733 35 28 0 chr13 24562480 24562798 -95721514 - IAPLTR2b LTR ERVK 0 327 1 1 772 863 10 0 0 chr13 24562831 24562929 -95721383 + MT2_Mm LTR ERVL 396 493 0 1 772 2081 107 9 51 chr13 24562978 24563314 -95720998 - RLTRETN_Mm LTR ERVK 0 322 1 1 772 647 157 14 76 chr13 24563314 24563459 -95720853 - MMETn-int LTR ERVK 0 4844 4709 1 772 254 309 98 49 chr13 24563459 24563663 -95720649 - RLTR13A2 LTR ERVK -468 490 277 1 772 33199 72 7 27 chr13 24563664 24568262 -95716050 - MMETn-int LTR ERVK -336 4508 2 1 772 2019 119 9 51 chr13 24568263 24568599 -95715713 - RLTRETN_Mm LTR ERVK 0 322 1 1 772 212 167 0 0 chr13 24568723 24568759 -95715553 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 772 458 245 43 0 chr13 24569143 24569237 -95715075 - B1F SINE Alu -51 98 1 1 772 407 106 0 15 chr13 24569500 24569567 -95714745 + (GGGA)n Simple_repeat Simple_repeat 4 69 0 1 772 247 203 125 0 chr13 24569567 24569631 -95714681 - PB1D10 SINE Alu -33 84 13 1 772 211 250 104 13 chr13 24569631 24569644 -95714668 - ID_B1 SINE B4 -59 165 82 1 772 236 211 139 14 chr13 24569769 24569841 -95714471 + Charlie1a DNA MER1_type 526 606 -849 1 772 233 119 24 0 chr13 24570123 24570165 -95714147 + (TCCA)n Simple_repeat Simple_repeat 4 46 0 1 772 337 306 12 0 chr13 24570182 24570267 -95714045 - PB1D10 SINE Alu -27 90 5 1 772 618 204 115 14 chr13 24570342 24570481 -95713831 + RSINE1 SINE B4 3 155 -10 1 772 405 0 0 0 chr13 24570499 24570544 -95713768 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 772 411 296 115 41 chr13 24570819 24571062 -95713250 - MT2A LTR ERVL -103 430 170 1 772 1128 257 8 42 chr13 24571176 24571440 -95712872 + B4A SINE B4 16 270 -22 1 772 182 105 26 0 chr13 24571444 24571482 -95712830 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 772 1443 151 0 22 chr13 24571601 24571831 -95712481 + URR1B DNA MER1_type 1 225 0 1 772 668 103 0 9 chr13 24571863 24571971 -95712341 + (TCC)n Simple_repeat Simple_repeat 3 109 0 1 772 344 296 0 12 chr13 24572292 24572374 -95711938 + B1_Mur2 SINE Alu 13 93 -56 1 772 238 301 0 12 chr13 24572397 24572481 -95711831 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 772 905 278 44 119 chr13 24572731 24573119 -95711193 - MTE2a LTR MaLR -20 359 1 1 772 209 200 0 0 chr13 24573242 24573277 -95711035 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 772 746 251 5 53 chr13 24573475 24573681 -95710631 - B3A SINE B2 0 198 3 1 772 270 330 22 11 chr13 24574230 24574322 -95709990 - PB1D7 SINE Alu -6 114 22 1 772 1451 187 167 17 chr13 24574611 24574965 -95709347 + MTD LTR MaLR 5 411 -8 1 772 700 187 253 17 chr13 24574970 24575144 -95709168 + B3 SINE B2 1 215 -1 1 772 839 61 0 9 chr13 24575232 24575347 -95708965 + (TTCTC)n Simple_repeat Simple_repeat 4 117 0 1 772 296 278 14 0 chr13 24576646 24576718 -95707594 + Tigger5 DNA MER2_type 3 75 -2331 1 772 270 321 222 0 chr13 24576694 24576856 -95707456 + Tigger5 DNA MER2_type 2127 2324 -82 1 772 405 282 9 35 chr13 24576861 24576975 -95707337 - B1F SINE Alu -29 120 10 1 772 217 51 51 0 chr13 24576998 24577037 -95707275 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 772 801 200 25 50 chr13 24578305 24578505 -95705807 - B3A SINE B2 0 198 4 1 772 529 194 29 10 chr13 24578531 24578635 -95705677 - U6 snRNA snRNA -1 106 1 1 772 1072 265 32 0 chr13 24578681 24578934 -95705378 + B4A SINE B4 7 267 -25 1 772 402 21 0 0 chr13 24578934 24578981 -95705331 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 772 195 359 82 41 chr13 24579039 24579161 -95705151 + MIRb SINE MIR 103 229 -39 1 772 251 298 83 0 chr13 24579180 24579264 -95705048 - MIRm SINE MIR -104 172 82 1 772 481 268 179 10 chr13 24579576 24579772 -95704540 + RMER15 LTR ERVL 345 573 -2 1 772 2136 150 104 8 chr13 24579891 24580275 -95704037 - MTC LTR MaLR 0 421 1 1 772 554 308 168 15 chr13 24581354 24581693 -95702619 + MLT1K LTR MaLR 201 591 -4 1 772 273 284 124 27 chr13 24582284 24582529 -95701783 + L1MA7 LINE L1 6032 6303 -9 1 772 883 298 80 49 chr13 24582635 24582984 -95701328 - MTEa LTR MaLR -19 360 1 1 772 424 327 151 47 chr13 24583698 24583889 -95700423 + ORR1E LTR MaLR 9 212 -147 1 772 183 80 0 0 chr13 24583889 24583914 -95700398 + (CCA)n Simple_repeat Simple_repeat 3 27 0 1 772 424 327 151 47 chr13 24583914 24584040 -95700272 + ORR1E LTR MaLR 213 359 0 1 772 330 282 24 41 chr13 24584081 24584251 -95700061 + (TAGA)n Simple_repeat Simple_repeat 3 169 0 1 772 248 311 97 69 chr13 24584269 24584414 -95699898 - MLT2B2 LTR ERVL -47 520 372 1 772 766 226 56 93 chr13 24584422 24584637 -95699675 - MLT2B2 LTR ERVL -308 207 1 1 772 1090 183 44 10 chr13 24585006 24585210 -95699102 - B3 SINE B2 0 216 6 1 772 1261 118 0 11 chr13 24586115 24586303 -95698009 + B2_Mm2 SINE B2 10 195 0 1 772 645 191 67 22 chr13 24586353 24586487 -95697825 - B1F SINE Alu -9 140 1 1 772 246 303 138 43 chr13 24586373 24586511 -95697801 - MT2B2 LTR ERVL -308 276 126 1 772 410 0 20 0 chr13 24586970 24587020 -95697292 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 772 322 282 89 89 chr13 24587099 24587278 -95697034 - ORR1E LTR MaLR -142 217 39 1 772 339 365 71 45 chr13 24587429 24587765 -95696547 - ORR1E LTR MaLR -6 353 9 1 772 432 214 0 0 chr13 24588193 24588305 -95696007 + (CA)n Simple_repeat Simple_repeat 1 112 0 1 772 182 305 73 83 chr13 24588354 24588558 -95695754 + MIR3 SINE MIR 7 208 0 1 772 624 266 89 17 chr13 24588727 24588907 -95695405 - B3A SINE B2 0 198 6 1 772 343 353 50 8 chr13 24589890 24590010 -95694302 + ID_B1 SINE B4 58 182 -42 1 772 504 165 0 0 chr13 24590166 24590257 -95694055 + GA-rich Low_complexity Low_complexity 4 94 0 1 772 332 329 65 32 chr13 24591105 24591259 -95693053 + MLT1D LTR MaLR 230 388 -117 1 772 542 109 15 45 chr13 24591381 24591515 -95692797 + (CAGAGA)n Simple_repeat Simple_repeat 3 132 0 1 772 628 230 114 7 chr13 24591522 24591662 -95692650 - B3A SINE B2 -43 155 1 1 772 250 339 17 42 chr13 24591727 24591847 -95692465 - MIR SINE MIR -29 233 117 1 772 315 239 33 22 chr13 24592219 24592309 -95692003 + RMER15 LTR ERVL 357 447 -128 1 772 381 194 219 48 chr13 24592331 24592477 -95691835 + B4 SINE B4 55 225 -67 1 772 354 80 0 0 chr13 24592507 24592557 -95691755 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 772 378 0 0 0 chr13 24592561 24592603 -95691709 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 772 259 316 0 13 chr13 24592604 24592681 -95691631 + ID SINE ID 3 78 -146 1 772 643 147 10 0 chr13 24592777 24592879 -95691433 + B3 SINE B2 5 107 -109 1 772 246 305 12 12 chr13 24592901 24592984 -95691328 - L2a LINE L2 0 3426 3344 1 772 261 0 0 0 chr13 24593950 24593979 -95690333 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 772 405 0 0 0 chr13 24594869 24594914 -95689398 + (GA)n Simple_repeat Simple_repeat 1 45 0 1 772 361 224 0 0 chr13 24594914 24594981 -95689331 - ID4_ SINE ID -12 71 5 1 772 243 0 0 0 chr13 24595020 24595047 -95689265 + (TTG)n Simple_repeat Simple_repeat 3 29 0 1 772 743 104 0 9 chr13 24595423 24595539 -95688773 + (TA)n Simple_repeat Simple_repeat 1 115 0 1 772 467 267 93 0 chr13 24596004 24596154 -95688158 - MER117 DNA MER1_type -23 174 11 1 772 865 298 140 56 chr13 24596197 24596740 -95687572 - MLT1E1 LTR MaLR -68 585 3 2 772 207 0 0 0 chr13 24596778 24596801 -95687511 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 2 772 288 302 123 17 chr13 24596831 24597067 -95687245 - L1MC4 LINE L1 -1 8041 7781 2 772 1768 194 103 5 chr13 24597177 24597555 -95686757 - MTD LTR MaLR 0 419 5 2 772 1013 239 37 33 chr13 24598304 24598576 -95685736 - B4A SINE B4 -18 274 2 2 772 339 25 0 0 chr13 24599700 24599740 -95684572 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 772 732 232 249 35 chr13 24600097 24600406 -95683906 - MTEa LTR MaLR 0 379 5 2 772 180 0 0 0 chr13 24600609 24600629 -95683683 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 772 247 302 16 0 chr13 24600844 24600907 -95683405 + tRNA-Ala-GCY_ tRNA tRNA 3 66 -9 2 772 423 0 0 0 chr13 24600919 24600966 -95683346 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 772 611 267 187 41 chr13 24601107 24601441 -95682871 - MTEb LTR MaLR -5 374 1 2 772 242 304 42 32 chr13 24601885 24601980 -95682332 - MTEb LTR MaLR -2 377 282 2 772 713 256 0 8 chr13 24602067 24602201 -95682111 + ID_B1 SINE B4 81 213 -11 2 772 21 0 0 0 chr13 24602498 24602519 -95681793 + AT_rich Low_complexity Low_complexity 1 21 0 2 772 324 0 0 0 chr13 24602523 24602559 -95681753 + (ATTG)n Simple_repeat Simple_repeat 1 36 0 2 772 588 306 0 0 chr13 24602568 24602712 -95681600 - RSINE1 SINE B4 -19 146 3 2 772 231 277 35 24 chr13 24602736 24602821 -95681491 - L1MA5 LINE L1 -4 6296 6211 2 772 192 228 0 0 chr13 24602824 24602881 -95681431 + (CATCC)n Simple_repeat Simple_repeat 4 60 0 2 772 723 237 129 67 chr13 24602885 24603246 -95681066 - L1MA5 LINE L1 -275 6025 5653 2 772 947 248 88 58 chr13 24604595 24604959 -95679353 + MTE2a LTR MaLR 4 378 -1 2 772 374 219 14 0 chr13 24606160 24606233 -95678079 + RSINE1 SINE B4 3 76 -89 2 772 1771 196 13 68 chr13 24606244 24606639 -95677673 - ORR1D1 LTR MaLR -1 373 1 2 772 292 338 27 0 chr13 24607258 24607332 -95676980 + RSINE1 SINE B4 90 165 0 2 772 1196 68 0 7 chr13 24607820 24607969 -95676343 + B1_Mus1 SINE Alu 1 148 0 2 772 186 43 0 0 chr13 24608198 24608221 -95676091 + (TTC)n Simple_repeat Simple_repeat 2 24 0 2 772 474 310 14 7 chr13 24608236 24608382 -95675930 - B1F SINE Alu -1 148 2 2 772 905 186 67 17 chr13 24608694 24608874 -95675438 + B3 SINE B2 1 189 -27 2 772 634 270 50 60 chr13 24608887 24608985 -95675327 + ID_B1 SINE B4 2 200 -24 2 772 261 314 123 8 chr13 24608985 24609088 -95675224 + B1F SINE Alu 13 122 -27 2 772 252 0 0 0 chr13 24609088 24609116 -95675196 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 772 261 314 123 8 chr13 24609116 24609134 -95675178 + B1F SINE Alu 123 147 -2 2 772 229 274 68 0 chr13 24609684 24609757 -95674555 - B1F SINE Alu -71 78 1 2 772 760 80 50 16 chr13 24610108 24610500 -95673812 + (CA)n Simple_repeat Simple_repeat 1 405 0 2 772 25 0 0 0 chr13 24610843 24610868 -95673444 + AT_rich Low_complexity Low_complexity 1 25 0 2 772 474 188 88 18 chr13 24611196 24611310 -95673002 - Lx5 LINE L1 -1 7049 6928 2 772 2156 189 66 7 chr13 24611305 24611716 -95672596 + Lx5 LINE L1 6484 6918 -132 2 772 636 233 67 12 chr13 24612045 24612210 -95672102 + ID_B1 SINE B4 49 222 -2 2 772 270 0 0 0 chr13 24613809 24613839 -95670473 + (A)n Simple_repeat Simple_repeat 1 30 0 2 772 642 26 0 0 chr13 24615453 24615529 -95668783 + (GAGAA)n Simple_repeat Simple_repeat 1 76 0 2 772 385 293 15 99 chr13 24616128 24616300 -95668012 + B3A SINE B2 15 172 -26 2 772 225 65 0 0 chr13 24616300 24616331 -95667981 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 2 772 385 293 15 99 chr13 24616331 24616359 -95667953 + B3A SINE B2 173 198 0 2 772 950 268 93 76 chr13 24616457 24616994 -95667318 - L1MB7 LINE L1 -132 6052 5507 2 772 480 288 65 22 chr13 24617160 24617437 -95666875 - L1MB7 LINE L1 -890 5256 4968 2 772 793 175 29 0 chr13 24617804 24617941 -95666371 - B1_Mus2 SINE Alu -5 142 2 2 772 588 87 0 0 chr13 24618724 24618816 -95665496 + (TC)n Simple_repeat Simple_repeat 1 92 0 2 772 223 195 0 0 chr13 24618825 24618866 -95665446 - PB1D10 SINE Alu -49 68 28 2 772 267 345 21 21 chr13 24619095 24619237 -95665075 + Tigger16a DNA Tigger 762 903 -30 2 772 1007 191 18 32 chr13 24619354 24619571 -95664741 + B3 SINE B2 3 216 0 2 772 392 216 86 0 chr13 24619781 24619897 -95664415 - MTEb LTR MaLR -2 377 252 2 772 319 266 92 25 chr13 24620104 24620263 -95664049 - MTEb LTR MaLR -187 183 3 2 772 704 272 133 31 chr13 24621197 24621520 -95662792 + RCHARR1 DNA MER1_type 1 356 -618 2 772 19451 21 0 0 chr13 24621568 24624457 -95659855 - L1Md_A LINE L1 -2 6580 3691 2 772 769 217 22 11 chr13 24624460 24624642 -95659670 + RCHARR1 DNA MER1_type 346 529 -445 2 772 686 168 7 42 chr13 24624674 24624817 -95659495 + B1_Mus2 SINE Alu 9 146 -1 2 772 1199 231 48 94 chr13 24624831 24625308 -95659004 + RCHARR1 DNA MER1_type 519 973 -1 2 772 367 234 0 49 chr13 24625392 24625473 -95658839 - ID_B1 SINE B4 -5 219 143 2 772 34 0 0 0 chr13 24625509 24625543 -95658769 + AT_rich Low_complexity Low_complexity 1 34 0 2 772 1106 48 7 0 chr13 24625701 24625846 -95658466 + (TAGA)n Simple_repeat Simple_repeat 3 148 0 2 772 1074 299 21 39 chr13 24625991 24626475 -95657837 - L1MA4 LINE L1 -368 5932 5458 2 772 666 292 123 16 chr13 24626827 24627144 -95657168 + ORR1E LTR MaLR 7 357 -2 2 772 947 169 137 5 chr13 24627330 24627520 -95656792 + B3 SINE B2 2 216 0 2 772 234 91 0 0 chr13 24627769 24627802 -95656510 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 2 772 353 22 22 0 chr13 24627840 24627886 -95656426 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 772 483 282 36 0 chr13 24627886 24627996 -95656316 - ID_B1 SINE B4 -10 214 101 2 772 589 282 117 0 chr13 24628632 24628705 -95655607 + MTEa LTR MaLR 127 202 -177 2 772 207 0 0 0 chr13 24628705 24628728 -95655584 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 2 772 589 282 117 0 chr13 24628728 24628877 -95655435 + MTEa LTR MaLR 203 374 -5 2 772 482 152 11 0 chr13 24628916 24629008 -95655304 + CT-rich Low_complexity Low_complexity 2 94 0 2 772 315 0 0 0 chr13 24629538 24629573 -95654739 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2 772 268 282 13 13 chr13 24629647 24629726 -95654586 - ID4 SINE ID -3 80 2 2 772 603 0 0 0 chr13 24629759 24629826 -95654486 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 2 772 405 0 0 0 chr13 24629984 24630029 -95654283 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 772 433 207 250 0 chr13 24630033 24630149 -95654163 - B3A SINE B2 -34 164 20 2 772 510 304 38 6 chr13 24630251 24630385 -95653927 + RSINE1 SINE B4 2 140 -25 2 772 495 48 0 0 chr13 24630385 24630447 -95653865 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 772 510 304 38 6 chr13 24630447 24630471 -95653841 + RSINE1 SINE B4 141 164 -1 2 772 1009 157 172 35 chr13 24630565 24630855 -95653457 - MTEb LTR MaLR 0 379 50 2 772 293 311 186 16 chr13 24630937 24631120 -95653192 + MER58A DNA MER1_type 11 224 0 2 772 242 254 15 0 chr13 24631207 24631274 -95653038 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 772 183 80 0 0 chr13 24631327 24631352 -95652960 + (TATATG)n Simple_repeat Simple_repeat 6 30 0 2 772 383 286 183 5 chr13 24632609 24632795 -95651517 - ID_B1 SINE B4 -3 221 3 2 772 439 299 67 0 chr13 24632992 24633126 -95651186 - MLT1A1 LTR MaLR -20 388 246 2 772 314 273 45 23 chr13 24633505 24633681 -95650631 + (TATG)n Simple_repeat Simple_repeat 1 180 0 2 772 186 133 0 0 chr13 24633852 24633882 -95650430 + (T)n Simple_repeat Simple_repeat 1 30 0 2 772 20183 79 10 1 chr13 24633884 24637289 -95647023 - L1_Mus2 LINE L1 0 6566 3129 2 772 2398 93 12 0 chr13 24638075 24638398 -95645914 - ORR1A2 LTR MaLR 0 327 1 2 772 203 274 62 46 chr13 24638508 24638573 -95645739 + L2b LINE L2 3297 3362 -13 2 772 1202 188 35 134 chr13 24640567 24641022 -95643290 - RMER17C LTR ERVK 0 410 1 2 773 357 170 0 33 chr13 24641643 24641734 -95642578 + CT-rich Low_complexity Low_complexity 2 89 0 2 773 558 98 0 0 chr13 24642130 24642212 -95642100 + (GGGA)n Simple_repeat Simple_repeat 4 85 0 2 773 482 197 21 11 chr13 24642560 24642665 -95641647 - B1F2 SINE Alu -1 148 44 2 773 186 309 44 0 chr13 24642674 24642742 -95641570 + L3 LINE CR1 4408 4478 -11 2 773 495 266 168 11 chr13 24642889 24643068 -95641244 + B4 SINE B4 2 208 -84 2 773 249 119 0 0 chr13 24643099 24643141 -95641171 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 773 245 197 14 0 chr13 24643162 24643233 -95641079 + GA-rich Low_complexity Low_complexity 1 72 0 2 773 627 14 0 0 chr13 24643362 24643434 -95640878 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 773 264 250 62 0 chr13 24644104 24644168 -95640144 - ID4 SINE ID -13 70 3 2 773 317 245 108 0 chr13 24644426 24644528 -95639784 + B1F SINE Alu 1 113 -36 2 773 214 295 103 32 chr13 24644528 24644551 -95639761 + ID_B1 SINE B4 82 215 -9 2 773 409 320 77 63 chr13 24644568 24644728 -95639584 - Tigger6a DNA MER2_type -89 994 827 2 773 900 169 108 5 chr13 24644728 24644913 -95639399 + B3 SINE B2 1 204 -12 2 773 409 320 77 63 chr13 24644913 24645039 -95639273 - Tigger6a DNA MER2_type -257 826 704 2 773 585 255 21 0 chr13 24645074 24645219 -95639093 - RSINE1 SINE B4 -14 151 4 2 773 247 311 0 0 chr13 24645225 24645299 -95639013 - Tigger6a DNA MER2_type -371 712 639 2 773 555 206 10 0 chr13 24645435 24645537 -95638775 - PB1D10 SINE Alu -10 107 5 2 773 2702 16 2 275 chr13 24645847 24646381 -95637931 + RLTR10 LTR ERVK 1 388 -2 2 773 332 245 80 47 chr13 24646397 24646547 -95637765 - Lx8 LINE L1 -3 7470 7316 2 773 1122 218 78 69 chr13 24646545 24646865 -95637447 - Lx8 LINE L1 -322 7151 6829 2 773 315 261 238 22 chr13 24646900 24647123 -95637189 - Tigger6a DNA MER2_type -757 326 56 2 773 588 285 19 149 chr13 24647951 24648145 -95636167 - B4A SINE B4 -12 280 89 2 773 899 85 0 8 chr13 24648145 24648276 -95636036 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 2 773 588 285 19 149 chr13 24648276 24648403 -95635909 - B4A SINE B4 -204 88 1 2 773 1505 234 13 24 chr13 24648773 24649154 -95635158 - MTEb LTR MaLR 0 379 3 2 773 211 333 0 0 chr13 24649504 24649564 -95634748 + B4A SINE B4 85 144 -148 2 773 483 269 17 0 chr13 24649513 24649632 -95634680 + B1F1 SINE Alu 9 129 -20 3 773 258 32 0 0 chr13 24650217 24650248 -95634064 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 773 351 0 0 0 chr13 24650248 24650286 -95634026 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 773 352 246 0 0 chr13 24650286 24650355 -95633957 - ID4_ SINE ID -11 72 4 3 773 342 0 0 0 chr13 24650739 24650777 -95633535 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 773 848 272 47 86 chr13 24651818 24652180 -95632132 - ORR1E LTR MaLR -6 353 6 3 773 320 314 32 0 chr13 24652588 24652738 -95631574 + MIRb SINE MIR 79 236 -26 3 773 693 220 0 0 chr13 24652827 24652968 -95631344 + B1_Mur4 SINE Alu 5 145 -5 3 773 1136 55 0 7 chr13 24653135 24653283 -95631029 + B1_Mus2 SINE Alu 1 147 0 3 773 815 179 0 0 chr13 24653846 24653986 -95630326 - B1F1 SINE Alu -2 147 8 3 773 213 215 232 21 chr13 24654509 24654604 -95629708 - MIRb SINE MIR -22 246 132 3 773 416 351 79 23 chr13 24654663 24654966 -95629346 - MLT1J LTR MaLR -68 444 125 3 773 204 200 0 0 chr13 24654986 24655021 -95629291 + (CCA)n Simple_repeat Simple_repeat 2 36 0 3 773 449 267 7 27 chr13 24655021 24655171 -95629141 + HAL1-2a_MD LINE L1 2345 2491 -533 3 773 1191 257 79 20 chr13 24655246 24655588 -95628724 - MTEa LTR MaLR -13 366 5 3 773 333 0 0 0 chr13 24655755 24655792 -95628520 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 773 876 242 84 18 chr13 24656046 24656320 -95627992 - B4A SINE B4 0 292 1 3 773 225 94 0 0 chr13 24656364 24656396 -95627916 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 3 773 594 0 0 0 chr13 24656404 24656470 -95627842 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 773 272 164 0 15 chr13 24656472 24656540 -95627772 + GA-rich Low_complexity Low_complexity 2 68 0 3 773 523 332 13 17 chr13 24657234 24657467 -95626845 - MIR SINE MIR -12 250 19 3 773 573 269 23 0 chr13 24658230 24658360 -95625952 + B1F SINE Alu 9 141 -8 3 773 523 319 0 7 chr13 24658366 24658502 -95625810 + RSINE1 SINE B4 3 137 -28 3 773 189 107 0 0 chr13 24658515 24658543 -95625769 + (CATA)n Simple_repeat Simple_repeat 1 28 0 3 773 569 302 18 30 chr13 24658874 24659038 -95625274 + RSINE1 SINE B4 3 164 -1 3 773 225 304 115 19 chr13 24660319 24660423 -95623889 + PB1D10 SINE Alu 3 116 -1 3 773 718 239 21 0 chr13 24660466 24660608 -95623704 - B1_Mm SINE Alu -1 146 2 3 773 238 276 29 39 chr13 24660635 24660737 -95623575 - MER57C2 LTR ERV1 -56 378 278 3 773 302 167 18 0 chr13 24661500 24661569 -95622743 + Lx8 LINE L1 5851 5932 -368 3 773 587 308 48 20 chr13 24662342 24662637 -95621675 - L1M2 LINE L1 -834 5309 5007 3 773 414 0 0 0 chr13 24662683 24662729 -95621583 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 773 496 241 52 15 chr13 24663229 24663364 -95620948 - B1F SINE Alu -9 140 1 3 773 359 362 99 20 chr13 24663586 24663890 -95620422 - MLT1C LTR MaLR -93 374 47 3 773 845 223 42 33 chr13 24663944 24664157 -95620155 + B3 SINE B2 2 216 0 3 773 1897 229 48 31 chr13 24664225 24664744 -95619568 - RLTR11A LTR ERVK 0 528 1 3 773 509 324 154 17 chr13 24665165 24665523 -95618789 - MLT1A1 LTR MaLR 0 408 2 3 773 2222 82 13 0 chr13 24666053 24666368 -95617944 + ORR1A2 LTR MaLR 1 319 -8 3 773 449 318 63 78 chr13 24666365 24666556 -95617756 + B4A SINE B4 26 213 -79 3 773 353 250 36 36 chr13 24666559 24666671 -95617641 + PB1D9 SINE Alu 2 113 -36 3 773 317 291 112 52 chr13 24666811 24666927 -95617385 + B1F SINE Alu 5 127 0 3 773 2077 163 28 67 chr13 24669204 24669638 -95614674 - MTC LTR MaLR 0 421 5 3 773 514 209 22 0 chr13 24669646 24669737 -95614575 - ID_B1 SINE B4 -17 207 115 3 773 443 65 293 122 chr13 24669770 24669893 -95614419 - B2_Mm2 SINE B2 -5 190 47 3 773 1210 105 29 6 chr13 24669944 24670117 -95614195 - B2_Mm1t SINE B2 -14 179 3 3 773 277 147 79 13 chr13 24670134 24670210 -95614102 - L1MC4a LINE L1 0 7882 7802 3 773 435 213 0 0 chr13 24670315 24670451 -95613861 + (TG)n Simple_repeat Simple_repeat 2 137 0 3 773 273 280 105 48 chr13 24670511 24670721 -95613591 - L1ME2 LINE L1 -71 6093 5872 3 773 230 272 36 24 chr13 24670859 24670942 -95613370 - L1MD LINE L1 -743 5616 5533 3 773 532 319 141 11 chr13 24671108 24671292 -95613020 - B4A SINE B4 -4 288 81 3 773 469 339 68 68 chr13 24671440 24671766 -95612546 - L1MEd LINE L1 -5009 1110 785 3 773 1500 233 91 42 chr13 24672029 24672611 -95611701 + RMER4A LTR ERVK 6 585 0 3 773 1524 223 41 47 chr13 24672961 24673323 -95610989 - MTEa LTR MaLR -6 373 14 3 773 225 0 0 0 chr13 24674525 24674550 -95609762 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 3 773 294 250 15 15 chr13 24674550 24674615 -95609697 - PB1D7 SINE Alu -10 110 46 3 773 215 206 42 56 chr13 24674865 24674937 -95609375 - MIR3 SINE MIR -28 180 110 3 773 411 56 0 0 chr13 24675158 24675212 -95609100 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 773 254 286 32 0 chr13 24675220 24675283 -95609029 + L2a LINE L2 3345 3409 -17 3 773 591 15 0 0 chr13 24675644 24675712 -95608600 + (GGGA)n Simple_repeat Simple_repeat 3 70 0 3 773 1179 59 0 0 chr13 24675729 24675881 -95608431 + (GAGAA)n Simple_repeat Simple_repeat 4 155 0 3 773 417 188 25 17 chr13 24675946 24676065 -95608247 + GA-rich Low_complexity Low_complexity 1 120 0 3 773 296 362 9 0 chr13 24676958 24677063 -95607249 + MIR SINE MIR 83 188 -74 3 773 188 67 33 0 chr13 24677353 24677383 -95606929 + (GGGAGA)n Simple_repeat Simple_repeat 6 36 0 3 773 567 29 0 0 chr13 24677710 24677779 -95606533 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 773 256 275 24 48 chr13 24677806 24677890 -95606422 - ID4 SINE ID 0 83 2 3 773 993 119 0 7 chr13 24677920 24678064 -95606248 - B1_Mur4 SINE Alu -7 143 1 3 773 445 252 47 31 chr13 24678087 24678214 -95606098 - B1F SINE Alu 0 149 21 3 773 1017 285 96 70 chr13 24678501 24679113 -95605199 + L1MB7 LINE L1 5332 5959 -225 3 773 307 284 32 0 chr13 24679149 24679258 -95605054 + L1M5 LINE L1 5358 5469 -693 3 773 670 304 91 20 chr13 24679338 24679734 -95604578 + L1MB7 LINE L1 5676 6099 -85 3 773 510 17 0 0 chr13 24679744 24679803 -95604509 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 773 446 306 8 16 chr13 24679803 24679926 -95604386 - RSINE1 SINE B4 -41 124 3 3 773 1289 184 300 22 chr13 24680051 24680461 -95603851 - RLTR28 LTR ERVL 0 524 1 3 773 2141 191 9 50 chr13 24680522 24680833 -95603479 - MTD LTR MaLR 0 419 118 3 773 1247 54 0 0 chr13 24680833 24680981 -95603331 + B1_Mus1 SINE Alu 1 148 0 3 773 1651 78 49 16 chr13 24680987 24681234 -95603078 + L1Md_F2 LINE L1 6327 6581 -1 3 773 2141 191 9 50 chr13 24681234 24681338 -95602974 - MTD LTR MaLR -305 114 14 3 773 4201 199 123 33 chr13 24681338 24682492 -95601820 - MTD-int LTR MaLR 0 1258 1 3 773 1958 194 16 37 chr13 24682492 24682567 -95601745 - MTD LTR MaLR 0 419 345 3 773 339 25 0 0 chr13 24682567 24682607 -95601705 + (TTGG)n Simple_repeat Simple_repeat 4 43 0 3 773 249 33 0 0 chr13 24682609 24682639 -95601673 + (TTTTG)n Simple_repeat Simple_repeat 4 33 0 3 773 1958 194 16 37 chr13 24682639 24682988 -95601324 - MTD LTR MaLR -75 344 3 3 773 223 241 0 44 chr13 24683341 24683432 -95600880 + T-rich Low_complexity Low_complexity 1 87 0 3 773 562 286 8 0 chr13 24683433 24683566 -95600746 - ID_B1 SINE B4 -5 219 86 3 773 548 299 0 0 chr13 24684291 24684418 -95599894 + ID_B1 SINE B4 91 217 -7 3 773 608 220 42 0 chr13 24684483 24684601 -95599711 + B1F SINE Alu 6 128 -21 3 773 426 283 21 48 chr13 24684601 24684620 -95599692 + ID_B1 SINE B4 116 220 -4 3 773 1428 51 11 0 chr13 24684811 24684987 -95599325 + B2_Mm1t SINE B2 2 179 -14 3 773 424 72 8 0 chr13 24685061 24685152 -95599160 + B2_Mm2 SINE B2 47 173 -22 3 773 420 111 0 0 chr13 24685154 24685217 -95599095 + (GGGA)n Simple_repeat Simple_repeat 4 66 0 3 773 192 280 24 151 chr13 24685359 24685420 -95598892 + MIRb SINE MIR 99 154 -114 3 773 419 257 46 0 chr13 24685420 24685529 -95598783 + PB1D10 SINE Alu 3 116 -1 3 773 192 280 24 151 chr13 24685529 24685593 -95598719 + MIRb SINE MIR 155 208 -60 3 773 348 295 94 10 chr13 24686515 24686611 -95597701 + PB1D10 SINE Alu 13 116 -1 3 773 1138 212 61 77 chr13 24686816 24687179 -95597133 + ORR1E LTR MaLR 1 357 -2 3 773 362 326 9 16 chr13 24688171 24688300 -95596012 - MLT1B LTR MaLR -7 460 277 3 773 256 239 140 53 chr13 24688280 24688430 -95595882 - MER34A1 LTR ERV1 -4 583 421 3 773 1331 81 23 6 chr13 24688586 24688761 -95595551 + B2_Mm2 SINE B2 3 180 -15 3 773 255 270 132 73 chr13 24689057 24689261 -95595051 - MLT1B LTR MaLR -124 250 35 3 773 339 139 0 22 chr13 24689513 24689578 -95594734 - B2_Mm2 SINE B2 -107 109 48 3 773 1254 103 11 0 chr13 24689640 24689815 -95594497 - B2_Mm1t SINE B2 -14 179 3 3 773 235 173 0 51 chr13 24689819 24689898 -95594414 + T-rich Low_complexity Low_complexity 4 78 0 3 773 559 302 37 141 chr13 24690980 24691362 -95592950 + MER63D DNA AcHobo 42 383 -678 3 773 346 296 0 0 chr13 24692096 24692177 -95592135 + ID4_ SINE ID 2 82 -1 3 773 759 206 0 0 chr13 24692179 24692344 -95591968 + (TA)n Simple_repeat Simple_repeat 2 166 0 3 773 819 190 14 7 chr13 24692371 24692509 -95591803 - B1F SINE Alu -1 148 10 3 773 463 294 0 0 chr13 24692526 24692635 -95591677 - PB1D10 SINE Alu -8 109 1 3 773 414 0 0 0 chr13 24692986 24693032 -95591280 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 4 773 445 303 40 65 chr13 24693042 24693243 -95591069 + B4A SINE B4 1 196 -96 4 773 301 280 10 20 chr13 24693337 24693439 -95590873 + (CA)n Simple_repeat Simple_repeat 1 101 0 4 773 593 291 134 4 chr13 24693459 24693697 -95590615 + MER2 DNA MER2_type 76 344 -1 4 773 485 306 8 90 chr13 24694567 24694639 -95589673 + ID SINE ID 1 70 -154 4 773 315 0 0 0 chr13 24694639 24694674 -95589638 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 773 485 306 8 90 chr13 24694674 24694697 -95589615 + ID_B1 SINE B4 71 223 -1 4 773 611 273 0 34 chr13 24694697 24694845 -95589467 + B1F1 SINE Alu 7 149 0 4 773 22 0 0 0 chr13 24695332 24695354 -95588958 + GC_rich Low_complexity Low_complexity 1 22 0 4 773 702 195 32 64 chr13 24695783 24695968 -95588344 - RMER17C LTR ERVK 0 410 161 4 773 486 0 0 0 chr13 24695968 24696022 -95588290 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 773 702 157 14 60 chr13 24696022 24696179 -95588133 - RMER17C LTR ERVK -250 160 12 4 773 511 234 169 0 chr13 24696240 24696364 -95587948 + B1F SINE Alu 5 149 0 4 773 711 65 0 0 chr13 24696374 24696467 -95587845 + (GGGAA)n Simple_repeat Simple_repeat 3 95 0 4 773 437 139 49 8 chr13 24697054 24697177 -95587135 + CT-rich Low_complexity Low_complexity 4 131 0 4 773 440 191 188 45 chr13 24697521 24697675 -95586637 - ID_B1 SINE B4 0 224 49 4 773 573 258 33 104 chr13 24698110 24698157 -95586155 - B3A SINE B2 -1 197 154 4 773 279 0 0 0 chr13 24698157 24698188 -95586124 + (GA)n Simple_repeat Simple_repeat 1 31 0 4 773 573 258 33 104 chr13 24698188 24698352 -95585960 - B3A SINE B2 -45 153 1 4 773 467 320 13 0 chr13 24698490 24698646 -95585666 + RSINE1 SINE B4 5 162 -3 4 773 207 133 39 26 chr13 24698961 24699038 -95585274 + T-rich Low_complexity Low_complexity 4 81 0 4 773 528 42 28 0 chr13 24699040 24699112 -95585200 - B1_Mus2 SINE Alu 0 147 74 4 773 1305 250 43 79 chr13 24699378 24699847 -95584465 - RMER5 LTR ERV1 -30 504 53 4 773 1183 191 5 0 chr13 24700214 24700413 -95583899 + B3 SINE B2 4 203 -13 4 773 426 39 0 0 chr13 24700604 24700656 -95583656 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 4 773 480 273 23 0 chr13 24700971 24701099 -95583213 + L1MA5 LINE L1 6161 6291 -9 4 773 323 276 87 19 chr13 24701140 24701290 -95583022 + B4A SINE B4 2 176 -116 4 773 631 246 131 142 chr13 24701417 24701777 -95582535 + MTE2a LTR MaLR 8 363 -16 4 773 583 237 36 133 chr13 24701816 24702011 -95582301 + MTEa LTR MaLR 201 376 -3 4 773 250 345 34 42 chr13 24702015 24702133 -95582179 - L2c LINE L2 -236 3151 3035 4 773 378 309 140 27 chr13 24702185 24702371 -95581941 + MIRb SINE MIR 6 212 -56 4 773 773 321 16 104 chr13 24702726 24703112 -95581200 + ORR1E LTR MaLR 6 357 -2 4 773 1816 131 204 0 chr13 24703152 24703466 -95580846 - ORR1C1 LTR MaLR 0 378 1 4 773 1830 171 74 9 chr13 24703580 24703917 -95580395 - ORR1B2 LTR MaLR -8 359 1 4 773 983 272 125 105 chr13 24703985 24704432 -95579880 - MLT1C LTR MaLR -7 460 5 4 773 792 212 86 11 chr13 24704478 24704509 -95579803 - MTEa LTR MaLR -22 357 327 4 773 192 40 0 0 chr13 24704509 24704534 -95579778 + (GGAA)n Simple_repeat Simple_repeat 2 26 0 4 773 792 216 85 12 chr13 24704534 24704709 -95579603 - MTEa LTR MaLR -52 327 139 4 773 185 0 40 0 chr13 24705639 24705664 -95578648 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 773 1068 31 0 0 chr13 24705684 24705812 -95578500 + (TTC)n Simple_repeat Simple_repeat 2 129 0 4 773 241 232 22 34 chr13 24706978 24707067 -95577245 + CT-rich Low_complexity Low_complexity 4 91 0 4 773 615 220 23 0 chr13 24707589 24707721 -95576591 + ID_B1 SINE B4 87 221 -3 4 773 480 214 78 0 chr13 24707751 24707854 -95576458 + PB1D10 SINE Alu 2 112 -5 4 773 905 256 25 0 chr13 24708361 24708560 -95575752 - B3 SINE B2 -3 213 10 4 773 339 335 85 20 chr13 24708893 24709086 -95575226 + MIR SINE MIR 47 243 -19 4 773 211 263 18 0 chr13 24709137 24709194 -95575118 + MIRc SINE MIR 69 126 -142 4 773 294 95 0 0 chr13 24709805 24709847 -95574465 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 773 222 125 53 18 chr13 24709879 24709936 -95574376 + CT-rich Low_complexity Low_complexity 3 61 0 4 773 464 233 129 12 chr13 24710575 24710713 -95573599 + Lx4B LINE L1 6906 7054 -4 4 773 770 183 81 17 chr13 24710854 24711027 -95573285 + B3 SINE B2 31 195 0 4 773 2266 266 45 55 chr13 24711172 24711906 -95572406 + Lx5 LINE L1 6455 7404 -56 4 773 312 248 140 70 chr13 24711992 24712135 -95572177 + L1MCa LINE L1 1247 1399 -5109 4 773 225 154 0 0 chr13 24712886 24712925 -95571387 + GA-rich Low_complexity Low_complexity 2 40 0 4 773 252 320 9 19 chr13 24713319 24713424 -95570888 + (ATG)n Simple_repeat Simple_repeat 2 105 0 4 773 434 316 23 34 chr13 24713429 24713606 -95570706 - HAL1-2a_MD LINE L1 -522 2502 2328 4 773 454 264 17 102 chr13 24713629 24713806 -95570506 - HAL1-2a_MD LINE L1 -518 2506 2345 4 773 360 148 0 0 chr13 24713851 24713912 -95570400 + (TGG)n Simple_repeat Simple_repeat 1 61 0 4 773 301 280 94 57 chr13 24714547 24714759 -95569553 - RLTR15 LTR ERVK -69 290 71 4 773 429 20 0 0 chr13 24715091 24715141 -95569171 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 773 785 296 75 32 chr13 24715293 24715542 -95568770 + B4A SINE B4 1 265 -27 4 773 297 75 0 0 chr13 24715542 24715582 -95568730 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 773 785 296 75 32 chr13 24715582 24715611 -95568701 + B4A SINE B4 266 291 -1 4 773 784 314 72 6 chr13 24715696 24716058 -95568254 + MER58D DNA MER1_type 1 386 0 4 773 747 206 42 93 chr13 24716088 24716281 -95568031 - B3A SINE B2 0 198 16 4 773 189 0 0 0 chr13 24716286 24716307 -95568005 + (CCCCAG)n Simple_repeat Simple_repeat 1 21 0 4 773 1097 309 62 36 chr13 24717214 24717681 -95566631 + L1MB3 LINE L1 5525 6003 -180 4 773 235 301 0 12 chr13 24717736 24717820 -95566492 + L1MB3 LINE L1 6011 6093 -78 4 773 673 299 0 0 chr13 24717839 24717986 -95566326 - B3A SINE B2 -36 162 16 4 773 223 195 0 0 chr13 24718021 24718062 -95566250 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 773 425 326 149 26 chr13 24718917 24719443 -95564869 - L2a LINE L2 -21 3405 2767 4 773 825 269 77 34 chr13 24719443 24719651 -95564661 + ID_B1 SINE B4 2 218 -6 4 773 293 297 0 39 chr13 24720551 24720628 -95563684 - ID4_ SINE ID -3 80 7 4 773 470 299 71 0 chr13 24722712 24722866 -95561446 - B4 SINE B4 -98 194 30 4 773 257 197 16 0 chr13 24723650 24723711 -95560601 + (CGTG)n Simple_repeat Simple_repeat 1 62 0 4 773 1115 237 75 0 chr13 24723725 24723978 -95560334 - B4A SINE B4 -12 280 9 4 773 261 253 248 32 chr13 24723992 24724107 -95560205 - B1F2 SINE Alu -1 148 1 4 773 219 204 0 0 chr13 24724241 24724290 -95560022 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 4 773 24 0 0 0 chr13 24725006 24725030 -95559282 + AT_rich Low_complexity Low_complexity 1 24 0 4 773 197 83 0 27 chr13 24725173 24725210 -95559102 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 4 773 719 158 98 0 chr13 24725468 24725601 -95558711 + B1_Mm SINE Alu 1 146 -1 4 773 736 269 18 35 chr13 24725626 24725853 -95558459 + ID_B1 SINE B4 2 224 0 4 773 189 241 123 25 chr13 24727483 24727564 -95556748 + MIRb SINE MIR 34 122 -146 4 773 224 274 98 67 chr13 24728136 24728386 -95555926 - L2b LINE L2 -9 3378 3128 4 773 739 313 10 15 chr13 24728500 24728698 -95555614 - MTEa LTR MaLR -181 198 2 4 773 416 239 46 0 chr13 24728841 24728950 -95555362 - MLT1E1 LTR MaLR -8 646 533 4 773 299 243 13 26 chr13 24729028 24729104 -95555208 + MIR SINE MIR 80 154 -108 4 773 454 233 0 23 chr13 24729849 24729937 -95554375 - B1F SINE Alu -30 119 34 4 773 204 287 24 32 chr13 24730468 24730594 -95553718 + C-rich Low_complexity Low_complexity 6 130 0 4 773 252 0 0 0 chr13 24731803 24731831 -95552481 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 773 252 111 0 0 chr13 24732911 24732956 -95551356 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 773 1219 259 24 0 chr13 24732956 24733203 -95551109 - B4A SINE B4 -39 253 1 4 773 247 277 83 65 chr13 24734863 24734971 -95549341 - MTEb LTR MaLR 0 379 270 4 773 958 310 108 35 chr13 24736551 24737003 -95547309 + MLT1D LTR MaLR 20 504 -1 4 773 236 294 184 0 chr13 24737700 24737809 -95546503 - B1F SINE Alu -20 129 1 4 773 957 134 47 0 chr13 24737825 24737974 -95546338 + B2_Mm2 SINE B2 3 158 -37 4 773 297 0 0 0 chr13 24737978 24738011 -95546301 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 4 773 579 234 40 74 chr13 24738058 24738206 -95546106 - B1F SINE Alu 0 149 7 4 773 351 288 53 18 chr13 24738213 24738326 -95545986 + MLT1G LTR MaLR 159 275 -316 4 773 251 279 116 41 chr13 24738538 24738684 -95545628 - L4 LINE RTE -1640 389 233 4 773 303 93 0 0 chr13 24739064 24739107 -95545205 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 4 773 477 266 43 25 chr13 24739318 24739512 -95544800 - B3A SINE B2 -5 190 1 4 773 320 255 45 81 chr13 24741275 24741386 -95542926 + PB1D7 SINE Alu 14 120 0 4 773 260 295 16 0 chr13 24741518 24741579 -95542733 - L4 LINE RTE -195 1834 1773 4 773 261 298 0 0 chr13 24741606 24741710 -95542602 + (TA)n Simple_repeat Simple_repeat 1 104 0 4 773 374 57 0 19 chr13 24741847 24741901 -95542411 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 773 198 0 0 0 chr13 24743282 24743304 -95541008 + (T)n Simple_repeat Simple_repeat 1 22 0 4 773 592 289 0 7 chr13 24743480 24743630 -95540682 - RCHARR1 DNA MER1_type 0 974 826 5 773 755 254 20 54 chr13 24743633 24743837 -95540475 + B3A SINE B2 2 198 0 5 773 1016 266 42 16 chr13 24743812 24744125 -95540187 - RCHARR1 DNA MER1_type -90 884 564 5 773 311 328 15 46 chr13 24744264 24744395 -95539917 + MER5B DNA MER1_type 36 162 -16 5 773 228 280 43 185 chr13 24744748 24744932 -95539380 + MT2B LTR ERVL 89 246 -355 5 773 688 203 68 5 chr13 24744800 24744939 -95539373 + ID_B1 SINE B4 65 207 -17 5 773 363 214 29 146 chr13 24744828 24744965 -95539347 + B1_Mur3 SINE Alu 7 127 -22 5 773 250 287 184 59 chr13 24745013 24745165 -95539147 + MIRc SINE MIR 22 192 -76 5 773 24 0 0 0 chr13 24746069 24746093 -95538219 + AT_rich Low_complexity Low_complexity 1 24 0 5 773 253 298 0 0 chr13 24746695 24746752 -95537560 + PB1D7 SINE Alu 28 84 -36 5 773 654 78 0 0 chr13 24746756 24746858 -95537454 + (TC)n Simple_repeat Simple_repeat 2 103 0 5 773 180 0 0 0 chr13 24746858 24746877 -95537435 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 773 732 197 49 0 chr13 24747509 24747651 -95536661 + B1_Mur2 SINE Alu 1 149 0 5 773 356 234 49 105 chr13 24747894 24748037 -95536275 + B3A SINE B2 61 216 0 5 773 253 248 64 37 chr13 24748048 24748157 -95536155 + Lx8 LINE L1 7360 7471 -2 5 773 225 0 0 0 chr13 24748158 24748183 -95536129 + (CATAA)n Simple_repeat Simple_repeat 5 29 0 5 773 6473 37 0 0 chr13 24749418 24750170 -95534142 + L1Md_A LINE L1 5830 6581 -1 5 773 426 266 62 0 chr13 24750587 24750700 -95533612 + PB1D9 SINE Alu 1 120 0 5 773 185 94 31 0 chr13 24750709 24750741 -95533571 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 773 411 289 138 6 chr13 24750758 24750939 -95533373 + L1MC4 LINE L1 7009 7213 -829 5 773 214 302 0 36 chr13 24750984 24751039 -95533273 - PB1D9 SINE Alu -55 65 13 5 773 527 270 57 44 chr13 24751230 24751389 -95532923 + RSINE1 SINE B4 4 164 -1 5 773 378 0 0 0 chr13 24751404 24751446 -95532866 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 773 756 173 123 0 chr13 24751779 24751941 -95532371 + B3 SINE B2 35 216 0 5 773 309 323 0 59 chr13 24752408 24752480 -95531832 - L1ME1 LINE L1 -2 6177 6107 5 773 1590 43 27 0 chr13 24752480 24752668 -95531644 - B2_Mm1t SINE B2 0 193 1 5 773 309 323 0 59 chr13 24752668 24752697 -95531615 - L1ME1 LINE L1 -73 6106 6082 5 773 217 354 25 0 chr13 24752754 24752833 -95531479 - ID4_ SINE ID 0 83 3 5 773 232 328 33 0 chr13 24754500 24754561 -95529751 - B3 SINE B2 -36 180 118 5 773 480 99 0 0 chr13 24754613 24754684 -95529628 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 773 623 270 0 28 chr13 24754685 24754826 -95529486 - B3A SINE B2 -56 142 6 5 773 724 196 76 112 chr13 24754862 24755086 -95529226 - B3 SINE B2 0 216 1 5 773 474 219 19 9 chr13 24755764 24755870 -95528442 - PB1D10 SINE Alu -9 108 2 5 773 324 232 0 0 chr13 24755951 24756007 -95528305 - ID4_ SINE ID -6 77 22 5 773 230 274 33 67 chr13 24756036 24756126 -95528186 - RMER12 LTR ERVK -1180 142 56 5 773 899 254 169 10 chr13 24756400 24756702 -95527610 - ORR1E LTR MaLR -1 358 9 5 773 309 269 78 69 chr13 24756833 24756949 -95527363 + PB1D10 SINE Alu 1 117 0 5 773 351 264 0 0 chr13 24757077 24757206 -95527106 + (TG)n Simple_repeat Simple_repeat 1 129 0 5 773 343 237 252 8 chr13 24757582 24757701 -95526611 + B1F SINE Alu 1 148 -1 5 773 21 0 0 0 chr13 24757703 24757724 -95526588 + AT_rich Low_complexity Low_complexity 1 21 0 5 773 250 365 8 17 chr13 24757883 24758000 -95526312 + MER5B DNA MER1_type 1 116 -62 5 773 366 310 44 9 chr13 24758087 24758173 -95526139 + B1F2 SINE Alu 18 107 -42 5 773 563 248 58 36 chr13 24758173 24758311 -95526001 + B1F SINE Alu 1 141 -8 5 773 712 148 9 0 chr13 24758486 24758594 -95525718 + B3 SINE B2 29 137 -79 5 773 262 252 33 0 chr13 24758685 24758757 -95525555 + ID4_ SINE ID 23 96 -56 5 773 207 0 0 0 chr13 24759012 24759035 -95525277 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 5 773 3479 104 6 2 chr13 24759051 24759540 -95524772 - MT2B2 LTR ERVL -19 565 75 5 773 1145 92 23 23 chr13 24759540 24759698 -95524614 + B2_Mm1a SINE B2 1 159 -34 5 773 294 29 0 0 chr13 24759698 24759733 -95524579 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 5 773 1145 92 23 23 chr13 24759733 24759751 -95524561 + B2_Mm1a SINE B2 160 177 -16 5 773 736 24 0 0 chr13 24759747 24759832 -95524480 - MT2B2 LTR ERVL -499 85 1 5 773 270 263 61 40 chr13 24759832 24759846 -95524466 - ORR1A3-int LTR MaLR -1265 698 598 5 773 387 0 0 0 chr13 24759871 24759914 -95524398 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 773 640 211 58 36 chr13 24759938 24760076 -95524236 - B1F SINE Alu -8 141 1 5 773 388 262 67 10 chr13 24760076 24760151 -95524161 - B1F2 SINE Alu -42 107 27 5 773 692 137 0 16 chr13 24761138 24761264 -95523048 + GA-rich Low_complexity Low_complexity 3 126 0 5 773 379 294 48 112 chr13 24761292 24761603 -95522709 + B4A SINE B4 2 292 0 5 773 333 260 9 48 chr13 24762087 24762192 -95522120 + HAL1-3A_ME LINE L1 1927 2027 -831 5 773 421 254 123 128 chr13 24762273 24762671 -95521641 - RMER10A LTR ERVL -25 417 22 5 773 249 271 121 30 chr13 24762935 24762968 -95521344 + B4A SINE B4 182 214 -78 5 773 459 0 0 0 chr13 24762968 24763019 -95521293 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 5 773 249 271 121 30 chr13 24763019 24763084 -95521228 + B4A SINE B4 215 289 -3 5 773 486 203 94 71 chr13 24763898 24764025 -95520287 - ID_B1 SINE B4 -7 217 88 5 773 434 256 0 57 chr13 24764228 24764352 -95519960 + PB1D7 SINE Alu 1 117 -3 5 773 581 210 19 121 chr13 24764650 24764807 -95519505 - B1F SINE Alu 0 149 9 5 773 314 232 162 0 chr13 24765137 24765236 -95519076 + PB1D10 SINE Alu 2 116 -1 5 773 198 0 0 0 chr13 24765257 24765279 -95519033 + (TAA)n Simple_repeat Simple_repeat 2 23 0 5 773 429 202 143 30 chr13 24765319 24765452 -95518860 + B2_Mm2 SINE B2 43 190 -5 5 773 1505 241 57 17 chr13 24765559 24765961 -95518351 - MTD LTR MaLR 0 419 2 5 773 342 0 0 0 chr13 24766865 24766903 -95517409 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 773 310 281 104 114 chr13 24767061 24767254 -95517058 - Kanga1 DNA Tc2 -1432 313 123 5 773 1154 227 0 0 chr13 24767834 24768050 -95516262 + B3 SINE B2 1 216 0 5 773 22 0 0 0 chr13 24768239 24768261 -95516051 + AT_rich Low_complexity Low_complexity 1 22 0 5 773 563 232 134 47 chr13 24768271 24768443 -95515869 + B3A SINE B2 1 187 -11 5 773 709 250 33 70 chr13 24768496 24768797 -95515515 + B4A SINE B4 3 292 0 5 773 476 214 6 0 chr13 24768833 24769011 -95515301 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 773 286 131 172 47 chr13 24769288 24769352 -95514960 - PB1D10 SINE Alu -70 78 7 5 773 222 274 58 78 chr13 24769815 24769918 -95514394 + BC1_Mm scRNA scRNA 2 102 -50 5 773 237 33 0 0 chr13 24770091 24770121 -95514191 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 773 507 107 0 0 chr13 24770121 24770196 -95514116 + (GA)n Simple_repeat Simple_repeat 2 76 0 5 773 659 185 19 31 chr13 24770586 24770727 -95513585 + B1F1 SINE Alu 1 149 0 5 773 441 251 3 0 chr13 24770735 24770834 -95513478 - B3 SINE B2 -83 110 10 5 773 709 269 20 84 chr13 24771855 24772058 -95512254 - B4 SINE B4 -17 275 86 5 774 231 281 108 42 chr13 24772949 24773116 -95511196 - L1MC5 LINE L1 -283 7678 7501 5 774 352 358 0 48 chr13 24773205 24773331 -95510981 - PB1D7 SINE Alu 0 120 1 5 774 310 262 67 0 chr13 24773331 24773495 -95510817 + (CACCT)n Simple_repeat Simple_repeat 1 175 0 5 774 336 265 66 0 chr13 24773525 24773732 -95510580 + (CACCT)n Simple_repeat Simple_repeat 1 220 0 5 774 338 266 65 0 chr13 24773774 24773943 -95510369 + (CACCT)n Simple_repeat Simple_repeat 1 180 0 5 774 807 256 23 0 chr13 24774361 24774533 -95509779 + B3 SINE B2 1 176 -40 5 774 804 258 89 109 chr13 24775029 24775377 -95508935 - MTEa LTR MaLR 0 379 39 5 774 636 38 0 0 chr13 24775388 24775467 -95508845 + (TTCCC)n Simple_repeat Simple_repeat 4 82 0 5 774 291 297 0 51 chr13 24775492 24775570 -95508742 - ID_B1 SINE B4 -47 177 104 5 774 414 0 0 0 chr13 24776314 24776360 -95507952 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 774 520 256 0 0 chr13 24776885 24777002 -95507310 + PB1D10 SINE Alu 1 117 0 5 774 408 40 0 0 chr13 24777041 24777091 -95507221 + (GAAAA)n Simple_repeat Simple_repeat 1 50 0 5 774 1299 97 11 6 chr13 24777091 24777268 -95507044 + B2_Mm1t SINE B2 2 179 -14 5 774 370 93 0 36 chr13 24777304 24777360 -95506952 + B2_Mm2 SINE B2 47 100 -95 5 774 180 0 0 0 chr13 24777387 24777407 -95506905 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 774 331 237 0 17 chr13 24777412 24777528 -95506784 + GA-rich Low_complexity Low_complexity 2 115 0 5 774 774 301 68 36 chr13 24778143 24778480 -95505832 - ORR1E LTR MaLR -8 351 4 5 774 628 281 10 82 chr13 24779610 24779804 -95504508 + B4A SINE B4 41 220 -72 5 774 243 0 0 0 chr13 24779806 24779833 -95504479 + (A)n Simple_repeat Simple_repeat 1 27 0 5 774 2143 164 56 5 chr13 24780201 24780594 -95503718 + MTC LTR MaLR 1 413 -8 5 774 654 221 56 11 chr13 24780650 24780822 -95503490 - B3 SINE B2 0 193 1 5 774 204 125 0 0 chr13 24781437 24781469 -95502843 + (CTG)n Simple_repeat Simple_repeat 1 32 0 5 774 348 229 13 0 chr13 24781469 24781540 -95502772 - ID4 SINE ID -5 78 3 5 774 207 0 0 0 chr13 24781560 24781583 -95502729 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 774 499 314 57 0 chr13 24781589 24781748 -95502564 - B3A SINE B2 -25 173 6 6 774 262 271 155 14 chr13 24781791 24781862 -95502450 - PB1D10 SINE Alu -33 84 4 6 774 351 0 0 0 chr13 24782093 24782132 -95502180 + (TTA)n Simple_repeat Simple_repeat 1 39 0 6 774 7650 77 10 43 chr13 24782132 24783334 -95500978 - L1_Mus1 LINE L1 -10 6557 5377 6 774 1653 21 0 15 chr13 24783334 24783529 -95500783 + B2_Mm1a SINE B2 2 193 0 6 774 4612 181 8 130 chr13 24783529 24783618 -95500694 - L1_Mus1 LINE L1 -510 5376 5292 6 774 696 43 75 0 chr13 24783618 24783712 -95500600 - B1_Mm SINE Alu 0 147 47 6 774 4612 181 8 130 chr13 24783712 24784167 -95500145 - L1_Mus1 LINE L1 -510 5291 4853 6 774 286 283 87 74 chr13 24784260 24784409 -95499903 - RMER10B LTR ERVL -5 446 269 6 774 611 242 53 58 chr13 24784393 24784564 -95499748 - RMER30 DNA MER1_type -27 175 6 6 774 707 224 83 5 chr13 24784996 24785041 -95499271 - B3 SINE B2 -6 210 163 6 774 333 0 0 0 chr13 24785041 24785078 -95499234 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 774 288 0 0 0 chr13 24785078 24785109 -95499203 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 774 707 224 83 5 chr13 24785109 24785255 -95499057 - B3 SINE B2 -54 162 6 6 774 365 298 29 92 chr13 24785290 24785464 -95498848 + B4 SINE B4 54 216 -76 6 774 719 206 0 0 chr13 24785342 24785473 -95498839 + B1_Mur2 SINE Alu 18 148 -1 6 774 628 262 7 7 chr13 24786334 24786476 -95497836 + ID_B1 SINE B4 82 223 -1 6 774 608 322 97 15 chr13 24786484 24786743 -95497569 + B4A SINE B4 2 281 -11 6 774 342 0 0 0 chr13 24786754 24786792 -95497520 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 774 373 309 74 40 chr13 24787670 24787872 -95496440 + B4A SINE B4 7 215 -77 6 774 536 240 133 11 chr13 24788732 24788913 -95495399 + ID_B1 SINE B4 1 203 -21 6 774 1303 234 92 6 chr13 24789464 24789799 -95494513 - MTEb LTR MaLR -13 366 3 6 774 660 279 49 49 chr13 24790983 24791228 -95493084 - MER2 DNA MER2_type -6 339 95 6 774 288 271 0 14 chr13 24791313 24791384 -95492928 + RSINE1 SINE B4 3 72 -93 6 774 363 44 0 0 chr13 24791427 24791472 -95492840 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 6 774 533 302 63 71 chr13 24791481 24791734 -95492578 + B4 SINE B4 29 279 -13 6 774 480 277 65 103 chr13 24791858 24792043 -95492269 - RMER30 DNA MER1_type -20 182 5 6 774 317 221 0 14 chr13 24792142 24792211 -95492101 - ID4_ SINE ID -14 69 2 6 774 203 152 0 0 chr13 24792332 24792365 -95491947 + C-rich Low_complexity Low_complexity 2 34 0 6 774 380 20 0 20 chr13 24792554 24792604 -95491708 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 774 764 250 97 10 chr13 24794389 24794595 -95489717 + B4 SINE B4 46 269 -23 6 774 459 35 0 0 chr13 24794601 24794658 -95489654 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 774 985 118 0 218 chr13 24796043 24796149 -95488163 + B2_Mm2 SINE B2 2 100 -95 6 774 611 13 13 0 chr13 24796149 24796225 -95488087 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 6 774 985 118 0 218 chr13 24796225 24796237 -95488075 + B2_Mm2 SINE B2 101 101 -94 6 774 1214 49 0 0 chr13 24796237 24796380 -95487932 + B1_Mus1 SINE Alu 1 143 -5 6 774 985 118 0 218 chr13 24796380 24796508 -95487804 + B2_Mm2 SINE B2 101 195 0 6 774 272 333 64 18 chr13 24797382 24797492 -95486820 - PB1 SINE Alu -2 125 11 6 774 646 259 41 56 chr13 24798252 24798448 -95485864 - RMER30 DNA MER1_type -8 194 2 6 774 193 89 0 43 chr13 24798890 24798937 -95485375 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 6 774 1246 27 0 27 chr13 24798938 24799088 -95485224 - B1_Mus1 SINE Alu -1 147 2 6 774 355 278 17 34 chr13 24799608 24799727 -95484585 + RSINE1 SINE B4 49 165 0 6 774 749 185 20 0 chr13 24799816 24799962 -95484350 + B1_Mur4 SINE Alu 1 149 -1 6 774 429 288 20 43 chr13 24800272 24800513 -95483799 - Lx7 LINE L1 -1569 5904 5668 6 774 649 203 47 0 chr13 24800746 24800874 -95483438 + B1_Mur4 SINE Alu 3 136 -14 6 774 189 74 0 0 chr13 24800878 24800905 -95483407 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 6 774 234 0 0 0 chr13 24800906 24800932 -95483380 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 6 774 1157 98 29 6 chr13 24801430 24801604 -95482708 - B2_Mm1t SINE B2 -2 191 14 6 774 602 260 0 8 chr13 24802597 24802721 -95481591 - ID_B1 SINE B4 0 224 102 6 774 440 255 0 9 chr13 24803236 24803347 -95480965 + PB1D10 SINE Alu 3 112 -5 6 774 401 262 9 45 chr13 24803530 24803642 -95480670 + PB1D7 SINE Alu 3 110 -10 6 774 1205 62 0 0 chr13 24803950 24804096 -95480216 - B1_Mus2 SINE Alu 0 147 2 6 774 546 235 113 8 chr13 24804345 24804478 -95479834 - B1F SINE Alu 0 149 3 6 774 594 252 22 22 chr13 24804365 24804503 -95479809 - ID_B1 SINE B4 -26 198 61 6 774 316 357 44 33 chr13 24804724 24804919 -95479393 + MIR SINE MIR 69 263 -5 6 774 484 204 78 0 chr13 24805129 24805232 -95479080 + B1F SINE Alu 34 144 -5 6 774 1046 193 127 40 chr13 24805777 24806030 -95478282 - B4 SINE B4 -14 278 4 6 774 256 274 196 9 chr13 24806671 24806684 -95477628 + ID_B1 SINE B4 90 159 -65 6 774 274 229 163 35 chr13 24806684 24806770 -95477542 + B1F SINE Alu 26 122 -27 6 774 278 186 186 0 chr13 24806791 24806850 -95477462 + ID4_ SINE ID 3 72 -11 6 774 252 0 0 0 chr13 24806850 24806878 -95477434 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 774 280 268 126 11 chr13 24806921 24807008 -95477304 + ID_B1 SINE B4 122 218 -6 6 774 561 307 76 49 chr13 24807511 24807840 -95476472 - ORR1E LTR MaLR -19 340 3 6 774 585 352 134 29 chr13 24807865 24808172 -95476140 - MER2 DNA MER2_type 0 345 7 6 774 280 294 81 0 chr13 24808244 24808380 -95475932 + L1ME3 LINE L1 5606 5752 -410 6 774 319 289 20 10 chr13 24808396 24808494 -95475818 + L1ME3 LINE L1 5859 5957 -205 6 774 189 0 0 0 chr13 24808882 24808903 -95475409 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 6 774 938 189 47 47 chr13 24808934 24809145 -95475167 + B3 SINE B2 5 215 -1 6 774 270 116 0 0 chr13 24809334 24809377 -95474935 + (TGAA)n Simple_repeat Simple_repeat 4 46 0 6 774 272 269 147 15 chr13 24810596 24810631 -95473681 - B2_Mm1t SINE B2 -2 191 151 6 774 270 95 0 0 chr13 24810631 24810673 -95473639 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 774 293 271 143 19 chr13 24810673 24810794 -95473518 - B3A SINE B2 -43 150 3 6 774 435 159 43 0 chr13 24810832 24810901 -95473411 - ID_B1 SINE B4 -2 222 151 6 774 510 216 0 0 chr13 24810902 24811004 -95473308 + RLTR20D LTR ERVK 329 430 -138 6 774 657 120 0 0 chr13 24811000 24811092 -95473220 + B2_Mm2 SINE B2 5 96 -99 6 774 468 92 10 58 chr13 24811102 24811191 -95473121 + Lx LINE L1 6556 6640 -14 6 774 1357 75 20 46 chr13 24811191 24811388 -95472924 + B2_Mm2 SINE B2 2 193 -2 6 774 468 92 10 58 chr13 24811388 24811402 -95472910 + Lx LINE L1 6641 6654 0 6 774 212 132 0 54 chr13 24811414 24811446 -95472866 + A-rich Low_complexity Low_complexity 1 32 0 6 774 1228 28 7 0 chr13 24811446 24811588 -95472724 + B1_Mm SINE Alu 1 143 -4 6 774 315 0 0 0 chr13 24811590 24811625 -95472687 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 774 212 132 0 54 chr13 24811625 24811645 -95472667 + A-rich Low_complexity Low_complexity 33 49 0 6 774 413 219 112 45 chr13 24811645 24811687 -95472625 + RLTR20D LTR ERVK 433 487 -91 6 774 468 77 0 0 chr13 24811687 24811752 -95472560 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 774 413 219 112 45 chr13 24811752 24811843 -95472469 + RLTR20D LTR ERVK 488 575 -3 6 774 281 255 128 0 chr13 24811846 24811940 -95472372 - ID_B1 SINE B4 -117 107 2 6 774 272 85 0 41 chr13 24813038 24813061 -95471251 + (GAAAA)n Simple_repeat Simple_repeat 4 26 0 6 774 1222 29 0 0 chr13 24813061 24813200 -95471112 + B1_Mus2 SINE Alu 2 140 -7 6 774 207 69 0 0 chr13 24813200 24813229 -95471083 + (TAA)n Simple_repeat Simple_repeat 2 30 0 6 774 272 85 0 41 chr13 24813229 24813253 -95471059 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 6 774 1425 65 0 26 chr13 24813866 24814056 -95470256 - B2_Mm2 SINE B2 -8 187 3 6 774 246 262 0 0 chr13 24814072 24814133 -95470179 + L1MA4A LINE L1 6122 6182 -121 6 774 225 0 0 0 chr13 24814357 24814382 -95469930 + (A)n Simple_repeat Simple_repeat 1 25 0 6 774 461 305 109 13 chr13 24814794 24815023 -95469289 - Lx8 LINE L1 -256 7217 6967 6 774 608 250 43 0 chr13 24815027 24815143 -95469169 - B3 SINE B2 -88 128 8 6 774 322 303 10 29 chr13 24815122 24815224 -95469088 - B1_Mur1 SINE Alu -3 146 47 6 774 319 167 15 15 chr13 24815233 24815300 -95469012 + B3 SINE B2 150 216 0 6 774 325 224 37 101 chr13 24815427 24815536 -95468776 - L1MC4a LINE L1 -1203 6679 6578 6 774 412 275 27 9 chr13 24817139 24817249 -95467063 + PB1D7 SINE Alu 9 120 0 6 774 643 304 6 0 chr13 24817614 24817772 -95466540 - ID_B1 SINE B4 -63 161 3 6 774 507 45 0 0 chr13 24817796 24817862 -95466450 + (TC)n Simple_repeat Simple_repeat 1 66 0 6 774 823 50 0 0 chr13 24817865 24817966 -95466346 - B1_Mus2 SINE Alu -5 142 42 6 774 317 191 10 82 chr13 24817882 24817979 -95466333 - RLTR25B LTR ERVK -507 521 432 6 774 198 192 0 0 chr13 24817980 24818032 -95466280 + CT-rich Low_complexity Low_complexity 2 53 0 6 774 586 278 0 0 chr13 24818033 24818195 -95466117 + (CCG)n Simple_repeat Simple_repeat 2 163 0 6 774 335 70 0 174 chr13 24818195 24818264 -95466048 - B1_Mus1 SINE Alu -88 60 4 6 774 438 217 172 9 chr13 24818312 24818428 -95465884 + B1F SINE Alu 12 146 -3 6 774 223 167 35 53 chr13 24818433 24818490 -95465822 + GA-rich Low_complexity Low_complexity 4 59 0 6 774 188 130 22 0 chr13 24819500 24819546 -95464766 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 6 774 255 93 0 0 chr13 24819554 24819597 -95464715 + (TTGG)n Simple_repeat Simple_repeat 2 44 0 6 774 843 70 0 50 chr13 24819603 24819724 -95464588 - B1_Mus1 SINE Alu 0 148 34 7 774 309 214 43 0 chr13 24819806 24819876 -95464436 + ID4 SINE ID 2 74 -9 7 774 363 270 27 0 chr13 24819998 24820072 -95464240 - RSINE1 SINE B4 -74 91 16 7 774 3233 115 58 0 chr13 24820371 24820840 -95463472 - RLTR19 LTR ERVK 0 499 4 7 774 662 207 9 0 chr13 24821370 24821486 -95462826 + B1_Mus2 SINE Alu 2 118 -29 7 774 465 175 19 67 chr13 24821487 24821591 -95462721 - BC1_Mm scRNA scRNA -53 99 1 7 774 439 265 68 8 chr13 24821600 24821718 -95462594 - PB1 SINE Alu -2 125 1 7 774 225 0 0 0 chr13 24821825 24821850 -95462462 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 774 1131 80 0 0 chr13 24821850 24821988 -95462324 - B1_Mus2 SINE Alu -9 138 1 7 774 409 295 63 77 chr13 24822075 24822380 -95461932 + RSINE1 SINE B4 1 292 0 7 774 3080 109 58 2 chr13 24822444 24822894 -95461418 - MT2C_Mm LTR ERVL 0 475 1 7 774 359 224 0 15 chr13 24823296 24823364 -95460948 + ID4_ SINE ID 4 70 -13 7 774 722 236 65 20 chr13 24824038 24824237 -95460075 + ID_B1 SINE B4 1 208 -16 7 774 201 74 0 0 chr13 24824257 24824284 -95460028 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 7 774 1262 41 0 0 chr13 24824284 24824431 -95459881 - B1_Mus2 SINE Alu 0 147 1 7 774 651 245 13 20 chr13 24824652 24824802 -95459510 - B1F2 SINE Alu 0 149 1 7 774 23 0 0 0 chr13 24825649 24825672 -95458640 + AT_rich Low_complexity Low_complexity 1 23 0 7 774 549 233 23 97 chr13 24825726 24825902 -95458410 - RSINE1 SINE B4 0 165 3 7 774 338 265 263 56 chr13 24826329 24826561 -95457751 - B4A SINE B4 -10 282 3 7 774 371 191 16 0 chr13 24826585 24826648 -95457664 - ID_B1 SINE B4 -9 215 152 7 774 404 327 101 61 chr13 24826607 24826733 -95457579 + ORR1E-int LTR MaLR 735 855 -515 7 774 246 62 0 0 chr13 24826733 24826765 -95457547 + (CACCC)n Simple_repeat Simple_repeat 4 35 0 7 774 441 303 114 68 chr13 24826765 24827065 -95457247 + ORR1E-int LTR MaLR 856 1339 -241 7 774 1043 85 7 0 chr13 24827059 24827200 -95457112 + RLTR19B LTR ERVK 266 407 -308 7 774 4628 101 35 12 chr13 24827355 24828035 -95456277 - RLTR19B LTR ERVK -19 696 1 7 774 1621 244 67 18 chr13 24828035 24828470 -95455842 + RMER5 LTR ERV1 71 526 -8 7 774 464 238 29 0 chr13 24828563 24828668 -95455644 - PB1D9 SINE Alu -8 112 5 7 774 390 336 132 16 chr13 24828671 24828922 -95455390 + ORR1E LTR MaLR 6 285 -74 7 774 715 191 0 81 chr13 24828927 24829075 -95455237 + B1_Mur1 SINE Alu 2 137 -12 7 774 198 0 0 0 chr13 24829076 24829098 -95455214 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 7 774 1883 126 11 114 chr13 24829430 24829788 -95454524 - ORR1A4 LTR MaLR -8 321 1 7 774 851 168 151 0 chr13 24830004 24830189 -95454123 + B3 SINE B2 4 216 0 7 774 393 274 232 30 chr13 24830334 24830571 -95453741 - L2 LINE L2 -774 2645 2361 7 774 508 146 60 0 chr13 24830595 24830695 -95453617 + B1_Mur4 SINE Alu 2 107 -43 7 774 707 57 9 0 chr13 24830705 24830810 -95453502 + (TAGA)n Simple_repeat Simple_repeat 3 108 0 7 774 557 164 8 91 chr13 24830814 24830935 -95453377 + B1_Mur1 SINE Alu 39 149 0 7 774 380 55 18 0 chr13 24830936 24830991 -95453321 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 774 681 240 74 14 chr13 24831060 24831208 -95453104 + B3A SINE B2 4 160 -38 7 774 330 26 0 0 chr13 24831215 24831254 -95453058 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 774 704 260 51 5 chr13 24831485 24831682 -95452630 + B3 SINE B2 1 206 -10 7 774 621 131 0 0 chr13 24831827 24831934 -95452378 + (TG)n Simple_repeat Simple_repeat 2 108 0 7 774 370 308 8 40 chr13 24831969 24832094 -95452218 + PB1 SINE Alu 3 123 -4 7 774 1513 82 0 5 chr13 24832207 24832403 -95451909 + B2_Mm2 SINE B2 1 195 0 7 774 228 135 0 0 chr13 24832403 24832440 -95451872 + (GA)n Simple_repeat Simple_repeat 1 37 0 7 774 402 282 0 41 chr13 24832458 24832580 -95451732 - PB1D10 SINE Alu 0 117 1 7 774 184 333 162 0 chr13 24832701 24832806 -95451506 - L2 LINE L2 -1802 1617 1496 7 774 297 128 0 0 chr13 24833525 24833572 -95450740 + (CACCAT)n Simple_repeat Simple_repeat 4 50 0 7 774 234 0 0 0 chr13 24833580 24833606 -95450706 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 7 774 833 184 0 0 chr13 24833607 24833748 -95450564 - B1_Mus2 SINE Alu -6 141 1 7 774 434 266 100 9 chr13 24833921 24834031 -95450281 + B1F2 SINE Alu 1 120 -29 7 774 527 78 13 0 chr13 24834038 24834115 -95450197 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 7 774 1920 170 145 0 chr13 24834176 24834617 -95449695 - RMER20A LTR ERVK -4 512 8 7 774 2017 202 100 126 chr13 24834648 24835435 -95448877 - RMER21B LTR ERV1 0 842 76 7 774 327 218 0 0 chr13 24835494 24835549 -95448763 + ID4_ SINE ID 20 74 -9 7 774 241 211 0 109 chr13 24835561 24835609 -95448703 + ID_B1 SINE B4 124 164 -60 7 774 329 264 0 32 chr13 24835609 24835703 -95448609 - RLTR20C LTR ERVK 0 551 461 7 774 998 143 6 0 chr13 24835703 24835878 -95448434 + (TC)n Simple_repeat Simple_repeat 1 176 0 7 774 763 189 77 28 chr13 24835899 24836108 -95448204 - RLTR20C LTR ERVK -366 202 1 7 774 779 136 48 48 chr13 24836667 24836814 -95447498 + B1_Mus1 SINE Alu 2 148 0 7 774 572 260 137 25 chr13 24837334 24837531 -95446781 + B4 SINE B4 1 219 -73 7 774 771 178 74 0 chr13 24837552 24837687 -95446625 + B1_Mus2 SINE Alu 1 145 -2 7 774 423 56 0 0 chr13 24837687 24837741 -95446571 + (TAA)n Simple_repeat Simple_repeat 2 55 0 7 774 213 194 0 0 chr13 24837781 24837845 -95446467 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 774 21 0 0 0 chr13 24838355 24838376 -95445936 + AT_rich Low_complexity Low_complexity 1 21 0 7 774 3198 212 109 78 chr13 24839106 24839512 -95444800 + RMER19B LTR ERVK 1 398 -504 7 774 2425 102 9 0 chr13 24839512 24839836 -95444476 - ORR1A2 LTR MaLR 0 327 1 7 774 3198 212 109 78 chr13 24839836 24840288 -95444024 + RMER19B LTR ERVK 399 886 -16 7 774 1393 110 16 0 chr13 24840288 24840479 -95443833 + B2_Mm2 SINE B2 2 195 0 7 774 4743 226 146 18 chr13 24840539 24841569 -95442743 + Lx6 LINE L1 5983 7139 -321 7 774 2290 224 42 57 chr13 24841569 24842189 -95442123 - RMER19C LTR ERVK 0 611 1 7 774 4743 226 146 18 chr13 24842189 24842466 -95441846 + Lx6 LINE L1 7140 7458 -2 7 774 359 301 62 0 chr13 24842496 24842609 -95441703 + RSINE1 SINE B4 1 120 -45 7 774 326 268 143 0 chr13 24843108 24843220 -95441092 + RSINE1 SINE B4 3 130 -35 7 774 316 151 252 26 chr13 24844416 24844552 -95439760 + B3A SINE B2 2 169 -24 7 774 1285 27 0 0 chr13 24844765 24844913 -95439399 + B1_Mus1 SINE Alu 1 148 0 7 774 196 300 17 0 chr13 24845051 24845111 -95439201 - MIRb SINE MIR -102 166 106 7 774 918 145 27 7 chr13 24845731 24845877 -95438435 + B1_Mur3 SINE Alu 1 149 0 7 774 234 0 0 0 chr13 24845896 24845922 -95438390 + (A)n Simple_repeat Simple_repeat 1 26 0 7 774 292 309 113 9 chr13 24846117 24846364 -95437948 - L1MC4 LINE L1 -481 7561 7260 7 774 198 0 0 0 chr13 24846531 24846553 -95437759 + (TCTG)n Simple_repeat Simple_repeat 3 24 0 7 774 270 317 74 8 chr13 24846561 24846682 -95437630 - ID_B1 SINE B4 -24 200 72 7 774 254 217 161 11 chr13 24846780 24846873 -95437439 - L1MC4 LINE L1 -1184 6858 6752 7 774 222 62 0 0 chr13 24847351 24847383 -95436929 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 774 1122 71 14 0 chr13 24847385 24847526 -95436786 - B1_Mus1 SINE Alu -5 143 1 7 774 312 219 250 8 chr13 24847702 24847822 -95436490 + B1F SINE Alu 1 149 0 7 774 816 166 0 33 chr13 24847916 24848066 -95436246 + B1_Mus1 SINE Alu 4 148 0 7 774 464 248 51 0 chr13 24848694 24848811 -95435501 + RSINE1 SINE B4 3 125 -40 7 774 314 252 139 30 chr13 24848897 24849054 -95435258 - B3A SINE B2 -2 214 45 7 774 1164 113 102 0 chr13 24849173 24849350 -95434962 + B2_Mm2 SINE B2 1 195 0 7 774 201 147 0 0 chr13 24849350 24849384 -95434928 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 7 774 1139 63 0 0 chr13 24849916 24850059 -95434253 + B1_Mus1 SINE Alu 1 143 -5 7 774 269 20 80 0 chr13 24850253 24850303 -95434009 + (CAAAAA)n Simple_repeat Simple_repeat 2 55 0 7 774 745 221 141 69 chr13 24850309 24850629 -95433683 + MTD LTR MaLR 43 385 -34 7 774 810 188 28 0 chr13 24850642 24850786 -95433526 - B1_Mur3 SINE Alu 0 149 2 7 774 551 174 20 92 chr13 24850964 24851116 -95433196 + B1F2 SINE Alu 3 143 -6 7 774 547 246 9 0 chr13 24851137 24851251 -95433061 + PB1D9 SINE Alu 1 115 -5 7 774 221 222 0 100 chr13 24851936 24851996 -95432316 + PB1 SINE Alu 71 124 -3 7 774 357 299 132 12 chr13 24852446 24852612 -95431700 + ID_B1 SINE B4 10 195 -29 7 774 261 0 0 0 chr13 24852792 24852821 -95431491 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 774 1002 59 29 22 chr13 24852824 24852958 -95431354 + B1_Mus1 SINE Alu 5 140 -8 7 774 279 0 0 0 chr13 24852958 24852989 -95431323 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 774 261 253 34 11 chr13 24853049 24853137 -95431175 - ID_B1 SINE B4 -51 173 84 7 774 24 53 0 0 chr13 24853375 24853413 -95430899 + GC_rich Low_complexity Low_complexity 1 38 0 7 774 262 218 0 0 chr13 24854246 24854301 -95430011 + L1ME1 LINE L1 6110 6164 -15 7 774 562 213 24 32 chr13 24854301 24854427 -95429885 + B3 SINE B2 5 129 -87 7 774 543 199 65 13 chr13 24854711 24854864 -95429448 - MTEb LTR MaLR 0 379 219 7 774 866 141 0 14 chr13 24855188 24855332 -95428980 - B1_Mur4 SINE Alu -2 148 7 7 774 575 239 0 0 chr13 24855391 24855500 -95428812 + PB1D10 SINE Alu 1 109 -8 8 774 446 280 42 0 chr13 24855535 24855653 -95428659 + RSINE1 SINE B4 2 124 -41 8 774 207 0 0 0 chr13 24855653 24855676 -95428636 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 774 360 0 0 0 chr13 24855676 24855715 -95428597 + (GA)n Simple_repeat Simple_repeat 2 41 0 8 774 2896 12 0 0 chr13 24855874 24856196 -95428116 + RLTRETN_Mm LTR ERVK 1 322 0 8 774 34450 34 2 8 chr13 24856196 24860274 -95424038 + MMETn-int LTR ERVK 1 4054 -790 8 774 3278 40 18 134 chr13 24860274 24860767 -95423545 - RLTR10C LTR ERVK 0 436 1 8 774 7687 41 1 51 chr13 24860767 24861747 -95422565 - MMERVK10C-int LTR ERVK 0 7581 6651 8 774 8856 36 2 1 chr13 24861738 24862758 -95421554 - MMERVK10C-int LTR ERVK -1771 5810 4790 8 774 1991 44 0 2 chr13 24862751 24863186 -95421126 - MMERVK10C-int LTR ERVK -1100 887 652 8 774 349 89 0 0 chr13 24863189 24863234 -95421078 - MMERVK10C-int LTR ERVK -6405 137 93 8 774 312 184 0 44 chr13 24863234 24863325 -95420987 + T-rich Low_complexity Low_complexity 3 89 0 8 774 983 73 2 0 chr13 24863407 24863537 -95420775 - MMERVK10C-int LTR ERVK -6271 210 58 8 774 2067 43 8 0 chr13 24863537 24863990 -95420322 - RLTR10C LTR ERVK -49 387 1 8 774 6402 41 23 13 chr13 24863990 24864778 -95419534 + MMETn-int LTR ERVK 4049 4844 0 8 774 2872 19 0 0 chr13 24864778 24865100 -95419212 + RLTRETN_Mm LTR ERVK 1 322 0 8 774 3308 41 8 0 chr13 24865100 24865493 -95418819 + MTA_Mm LTR MaLR 1 396 0 8 774 8987 51 5 1 chr13 24865493 24866587 -95417725 + MTA_Mm-int LTR MaLR 1 1098 0 8 774 3457 10 13 3 chr13 24866587 24866979 -95417333 + MTA_Mm LTR MaLR 1 396 0 8 774 210 258 32 16 chr13 24867316 24867379 -95416933 + B1F1 SINE Alu 46 109 -40 8 774 531 297 7 0 chr13 24867396 24867544 -95416768 + B1F SINE Alu 1 149 0 8 774 679 185 0 126 chr13 24867563 24867730 -95416582 + B1_Mur2 SINE Alu 3 148 -1 8 774 361 248 100 9 chr13 24868203 24868313 -95415999 - LTR41 LTR ERVL -587 181 62 8 774 612 0 0 0 chr13 24868339 24868407 -95415905 + (TG)n Simple_repeat Simple_repeat 2 69 0 8 774 347 275 11 21 chr13 24868435 24868528 -95415784 - RSINE1 SINE B4 -39 126 35 8 774 1380 70 5 26 chr13 24868563 24868753 -95415559 + B2_Mm2 SINE B2 2 187 -8 8 774 1222 48 7 0 chr13 24868860 24869007 -95415305 - B1_Mus1 SINE Alu 0 148 1 8 774 1151 37 0 0 chr13 24869273 24869407 -95414905 + B1_Mus2 SINE Alu 1 134 -13 8 774 207 0 0 0 chr13 24869409 24869432 -95414880 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 8 774 1326 73 14 86 chr13 24869446 24869656 -95414656 + B2_Mm2 SINE B2 1 195 0 8 774 555 229 83 8 chr13 24869662 24869794 -95414518 + B1_Mur2 SINE Alu 1 142 -7 8 774 592 282 66 22 chr13 24869821 24870002 -95414310 + B3A SINE B2 10 198 0 8 774 290 200 16 32 chr13 24870034 24870096 -95414216 + PB1D10 SINE Alu 20 80 -37 8 774 253 203 102 0 chr13 24870081 24870140 -95414172 - PB1D10 SINE Alu -32 85 21 8 774 303 192 90 0 chr13 24870160 24870238 -95414074 - PB1D10 SINE Alu -7 110 26 8 774 4209 133 56 20 chr13 24870277 24871007 -95413305 + RMER6A LTR ERVK 1 756 0 8 774 713 253 26 21 chr13 24871238 24871428 -95412884 + B3A SINE B2 2 192 -6 8 774 299 303 29 39 chr13 24871614 24871639 -95412673 - PB1D10 SINE Alu -2 115 14 8 774 320 282 0 0 chr13 24871639 24871717 -95412595 - ID_B1 SINE B4 -52 172 95 8 774 388 245 31 0 chr13 24871723 24871821 -95412491 - B1F SINE Alu -33 116 16 8 774 653 129 9 0 chr13 24872195 24872311 -95412001 + (TG)n Simple_repeat Simple_repeat 2 118 0 8 774 499 268 16 0 chr13 24872791 24872918 -95411394 + B3A SINE B2 1 129 -69 8 774 360 226 12 0 chr13 24873318 24873402 -95410910 + B1F SINE Alu 10 94 -55 8 774 460 299 74 7 chr13 24873419 24873567 -95410745 + RSINE1 SINE B4 8 165 0 8 774 252 312 92 17 chr13 24873567 24873590 -95410722 + B3A SINE B2 8 191 -7 8 774 339 292 41 24 chr13 24873792 24873915 -95410397 + MLT1E LTR MaLR 118 242 -411 8 774 2312 35 0 0 chr13 24874579 24874868 -95409444 - IAPEY2_LTR LTR ERVK 0 357 69 8 774 484 243 0 10 chr13 24875089 24875193 -95409119 + RSINE1 SINE B4 3 105 -60 8 774 1404 57 45 0 chr13 24875255 24875432 -95408880 + B2_Mm2 SINE B2 2 186 -9 8 774 1088 108 6 0 chr13 24875456 24875622 -95408690 - B2_Mm2 SINE B2 -27 168 2 8 774 324 70 0 0 chr13 24875635 24875678 -95408634 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 8 774 1185 62 0 0 chr13 24875678 24875823 -95408489 - B1_Mus2 SINE Alu -2 145 1 8 774 506 278 51 23 chr13 24876186 24876363 -95407949 + B3A SINE B2 1 182 -16 8 774 522 248 66 0 chr13 24876394 24876531 -95407781 - B1_Mur2 SINE Alu 0 149 4 8 774 394 316 15 7 chr13 24876789 24876926 -95407386 - ID_B1 SINE B4 -6 218 81 8 774 978 257 52 65 chr13 24877349 24877765 -95406547 + MTE2a LTR MaLR 1 405 -14 8 774 646 317 73 31 chr13 24877898 24878256 -95406056 - MTEb LTR MaLR -6 373 1 8 774 930 162 7 0 chr13 24878752 24878900 -95405412 - B1_Mur2 SINE Alu 0 149 1 8 774 428 241 51 7 chr13 24878961 24879099 -95405213 + B1F SINE Alu 6 149 0 8 774 328 282 0 0 chr13 24879102 24879173 -95405139 + ID4_ SINE ID 2 72 -11 8 774 247 232 18 116 chr13 24879516 24879628 -95404684 - MER97c DNA MER1_type? -5 1085 985 8 774 495 0 0 0 chr13 24879721 24879776 -95404536 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 774 1270 99 55 0 chr13 24879916 24880098 -95404214 + B2_Mm1t SINE B2 1 192 -1 8 774 1450 88 5 0 chr13 24880100 24880292 -95404020 + B2_Mm1a SINE B2 1 193 0 8 774 405 284 0 0 chr13 24880325 24880413 -95403899 - PB1D10 SINE Alu -21 96 9 8 774 359 272 0 19 chr13 24880516 24880621 -95403691 + MLT1A1 LTR MaLR 305 407 -1 8 774 460 289 20 20 chr13 24880694 24880846 -95403466 + RCHARR1 DNA MER1_type 1 152 -822 8 774 1125 225 68 51 chr13 24880886 24881238 -95403074 - ORR1D2 LTR MaLR -12 358 1 8 774 766 252 63 41 chr13 24881238 24881507 -95402805 + RCHARR1 DNA MER1_type 202 476 -498 8 774 289 333 11 11 chr13 24881720 24881814 -95402498 + B1F2 SINE Alu 38 131 -18 8 774 543 224 398 7 chr13 24881897 24882166 -95402146 - MTE2a LTR MaLR -3 376 3 8 774 261 262 98 24 chr13 24882264 24882346 -95401966 - ID_B1 SINE B4 -51 173 86 8 774 687 254 0 0 chr13 24882514 24882656 -95401656 + B1_Mus2 SINE Alu 5 146 -1 8 774 3553 23 0 0 chr13 24882860 24883256 -95401056 - MTA_Mm LTR MaLR 0 396 1 8 774 522 322 102 20 chr13 24883359 24883654 -95400658 - Lx8 LINE L1 -340 7133 6815 8 774 357 24 0 0 chr13 24883799 24883841 -95400471 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 8 774 324 219 16 0 chr13 24883872 24883936 -95400376 - PB1D9 SINE Alu -55 65 1 8 774 598 222 35 55 chr13 24883951 24884151 -95400161 - B3A SINE B2 0 198 3 8 774 306 0 0 0 chr13 24884912 24884946 -95399366 + (TC)n Simple_repeat Simple_repeat 2 35 0 8 774 347 0 23 0 chr13 24884946 24884988 -95399324 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 774 1474 73 16 0 chr13 24885413 24885605 -95398707 - B2_Mm2 SINE B2 0 195 1 8 774 195 341 55 31 chr13 24885776 24885903 -95398409 + L2 LINE L2 1954 2083 -1336 8 774 391 261 93 78 chr13 24885910 24886039 -95398273 - ID_B1 SINE B4 -10 214 84 8 774 370 245 9 28 chr13 24886107 24886216 -95398096 - B1F SINE Alu -42 107 1 8 774 281 305 111 39 chr13 24886236 24886497 -95397815 - MLT1G1 LTR MaLR -80 499 230 8 774 806 216 36 0 chr13 24886772 24886939 -95397373 - ID_B1 SINE B4 -18 206 34 8 774 240 229 180 0 chr13 24886889 24886950 -95397362 - ID4_ SINE ID -1 82 11 8 774 489 302 42 0 chr13 24887006 24887125 -95397187 - B1F SINE Alu -9 140 17 8 774 1423 84 16 0 chr13 24887167 24887358 -95396954 - B2_Mm2 SINE B2 0 195 2 8 774 1158 68 7 0 chr13 24888209 24888356 -95395956 - B1_Mus1 SINE Alu 0 148 1 8 774 1093 7 78 28 chr13 24888489 24888630 -95395682 - B1_Mus1 SINE Alu 0 148 1 8 774 228 290 29 14 chr13 24888696 24888766 -95395546 + PB1D10 SINE Alu 3 73 -44 8 774 253 77 19 74 chr13 24888909 24888963 -95395349 + B1F SINE Alu 103 148 -1 8 774 422 186 70 0 chr13 24888971 24889057 -95395255 - B3 SINE B2 -40 176 85 8 774 21 0 0 0 chr13 24889127 24889148 -95395164 + AT_rich Low_complexity Low_complexity 1 21 0 8 774 290 254 0 0 chr13 24889276 24889335 -95394977 - ID_B1 SINE B4 -54 170 112 8 774 266 148 19 0 chr13 24889368 24889422 -95394890 + CT-rich Low_complexity Low_complexity 2 56 0 8 774 479 231 106 31 chr13 24889542 24889703 -95394609 - B4A SINE B4 -119 173 1 8 774 220 221 49 49 chr13 24890017 24890098 -95394214 - PB1 SINE Alu 0 127 47 8 774 301 74 74 0 chr13 24890189 24890243 -95394069 + L1M4 LINE L1 5090 5147 -999 8 774 198 0 0 0 chr13 24890265 24890287 -95394025 + (A)n Simple_repeat Simple_repeat 1 22 0 8 774 451 266 201 17 chr13 24890411 24890772 -95393540 + L1MB8 LINE L1 5593 6019 -145 8 774 280 186 86 0 chr13 24891081 24891151 -95393161 - RSINE1 SINE B4 -86 79 4 8 774 569 261 36 0 chr13 24891170 24891308 -95393004 - B1F1 SINE Alu 0 149 7 8 774 300 288 74 99 chr13 24891173 24891335 -95392977 - B4 SINE B4 -70 222 65 8 774 365 205 221 9 chr13 24891350 24891463 -95392849 - B1F SINE Alu -12 137 1 8 774 343 247 71 0 chr13 24891542 24891627 -95392685 + B3 SINE B2 94 184 -32 8 774 1128 168 76 9 chr13 24892323 24892534 -95391778 - URR1B DNA MER1_type 0 225 1 8 774 228 281 0 33 chr13 24893340 24893432 -95390880 + C-rich Low_complexity Low_complexity 3 91 0 8 774 213 119 0 0 chr13 24893595 24893637 -95390675 + (CCG)n Simple_repeat Simple_repeat 3 44 0 9 774 344 213 32 11 chr13 24898051 24898146 -95386166 - ID_B1 SINE B4 -1 223 127 9 774 702 79 61 0 chr13 24898587 24898701 -95385611 + B1_Mus1 SINE Alu 28 148 0 9 774 306 134 0 0 chr13 24898731 24898798 -95385514 + (T)n Simple_repeat Simple_repeat 1 67 0 9 774 795 241 14 36 chr13 24899104 24899324 -95384988 + B3 SINE B2 2 216 0 9 774 262 253 144 34 chr13 24899561 24899791 -95384521 - MER2 DNA MER2_type -58 287 40 9 774 863 130 7 7 chr13 24899902 24900041 -95384271 + B1_Mur4 SINE Alu 11 149 -1 9 774 450 156 30 30 chr13 24900519 24900618 -95383694 - PB1D9 SINE Alu 0 120 22 9 774 745 55 136 0 chr13 24900992 24901102 -95383210 - B2_Mm2 SINE B2 -70 125 1 9 774 920 68 111 15 chr13 24902321 24902456 -95381856 - B1_Mus1 SINE Alu 0 148 1 9 774 350 214 0 22 chr13 24903442 24903533 -95380779 - PB1D9 SINE Alu 0 120 32 9 775 1414 82 5 0 chr13 24903810 24903994 -95380318 + B2_Mm2 SINE B2 2 186 -9 9 775 820 128 136 0 chr13 24904014 24904139 -95380173 + B1_Mus1 SINE Alu 1 142 -6 9 775 221 0 0 33 chr13 24905641 24905671 -95378641 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 9 775 189 0 0 0 chr13 24905896 24905917 -95378395 + (T)n Simple_repeat Simple_repeat 1 21 0 9 775 1191 54 0 13 chr13 24906400 24906550 -95377762 + B1_Mus1 SINE Alu 1 148 0 9 775 236 239 96 64 chr13 24907081 24907206 -95377106 - L1MC3 LINE L1 -942 6843 6715 9 775 1129 62 14 14 chr13 24907391 24907537 -95376775 - B1_Mm SINE Alu -1 146 1 9 775 3856 208 86 72 chr13 24908137 24909354 -95374958 + RMER1A Other Other 1 1009 -21 9 775 180 0 0 0 chr13 24909354 24909374 -95374938 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 9 775 397 206 117 36 chr13 24909402 24909513 -95374799 + PB1D7 SINE Alu 1 120 0 9 775 233 270 65 33 chr13 24909593 24909685 -95374627 + B4A SINE B4 73 167 -125 9 775 504 164 16 127 chr13 24909608 24909734 -95374578 + B1_Mur2 SINE Alu 7 118 -2 9 775 741 214 46 6 chr13 24910416 24910590 -95373722 + B3 SINE B2 2 182 -34 9 775 367 271 10 10 chr13 24910814 24910911 -95373401 - RSINE1 SINE B4 -4 161 65 9 775 408 292 19 0 chr13 24910901 24911007 -95373305 - RSINE1 SINE B4 -56 109 2 9 775 715 233 66 28 chr13 24911054 24911235 -95373077 - B3A SINE B2 -5 193 6 9 775 562 228 9 0 chr13 24911446 24911560 -95372752 - PB1D10 SINE Alu -1 116 2 9 775 265 175 58 87 chr13 24911820 24911889 -95372423 - ID_B1 SINE B4 -54 170 104 9 775 300 276 31 31 chr13 24911933 24912030 -95372282 - B1_Mur3 SINE Alu -52 97 1 9 775 520 190 10 0 chr13 24912047 24912147 -95372165 - B1_Mus2 SINE Alu 0 147 47 9 775 300 237 51 26 chr13 24912091 24912169 -95372143 - MT2B LTR ERVL -344 257 178 9 775 1163 75 0 0 chr13 24912221 24912367 -95371945 + B1_Mus2 SINE Alu 2 147 0 9 775 22 0 0 0 chr13 24912369 24912391 -95371921 + AT_rich Low_complexity Low_complexity 1 22 0 9 775 247 134 209 0 chr13 24912425 24912492 -95371820 + MER2 DNA MER2_type 71 151 -194 9 775 182 62 0 30 chr13 24912514 24912547 -95371765 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 9 775 1269 79 62 0 chr13 24912992 24913169 -95371143 + B2_Mm2 SINE B2 1 188 -7 9 775 560 283 40 23 chr13 24913206 24913383 -95370929 - B3A SINE B2 -17 181 2 9 775 230 81 27 0 chr13 24913401 24913438 -95370874 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 775 291 28 0 0 chr13 24913815 24913851 -95370461 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 9 775 1472 74 5 0 chr13 24913925 24914115 -95370197 + B2_Mm1a SINE B2 3 193 0 9 775 421 252 88 0 chr13 24914118 24914265 -95370047 + B3A SINE B2 33 192 -6 9 775 246 32 0 0 chr13 24914288 24914319 -95369993 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 775 617 242 85 0 chr13 24914320 24914473 -95369839 - B3 SINE B2 -50 166 1 9 775 470 235 49 0 chr13 24914508 24914610 -95369702 - PB1D10 SINE Alu -10 107 1 9 775 606 212 43 74 chr13 24915173 24915336 -95368976 - ID_B1 SINE B4 -66 158 1 9 775 858 18 0 9 chr13 24915439 24915550 -95368762 - B1_Mm SINE Alu 0 147 38 9 775 1995 94 43 0 chr13 24915826 24916125 -95368187 - ORR1A2 LTR MaLR -8 319 8 9 775 244 272 37 46 chr13 24916148 24916256 -95368056 - PB1D10 SINE Alu -7 110 4 9 775 218 245 0 58 chr13 24916497 24916549 -95367763 - ID4_ SINE ID -26 57 9 9 775 355 294 9 35 chr13 24916820 24916933 -95367379 - PB1D10 SINE Alu -5 112 3 9 775 279 302 21 10 chr13 24916846 24916943 -95367369 - ID_B1 SINE B4 -53 171 74 9 775 573 152 51 0 chr13 24917311 24917429 -95366883 + B1_Mus1 SINE Alu 24 147 -1 9 775 249 156 25 41 chr13 24917551 24917635 -95366677 - PB1 SINE Alu 0 149 44 9 775 374 219 23 18 chr13 24917752 24917863 -95366449 + PB1D10 SINE Alu 2 117 0 9 775 386 228 62 54 chr13 24918126 24918256 -95366056 + ID_B1 SINE B4 85 215 -9 9 775 781 240 17 11 chr13 24918269 24918450 -95365862 + B3A SINE B2 2 183 -15 9 775 215 224 155 0 chr13 24918629 24918687 -95365625 - ID4_ SINE ID -16 67 1 9 775 338 326 14 55 chr13 24918883 24919029 -95365283 - MER20 DNA MER1_type 0 219 80 9 775 280 272 25 0 chr13 24919072 24919153 -95365159 + Lx8 LINE L1 7047 7129 -344 9 775 437 308 172 0 chr13 24919153 24919374 -95364938 + Lx8 LINE L1 7096 7354 -119 9 775 446 259 0 59 chr13 24919383 24919502 -95364810 + B1_Mus2 SINE Alu 5 116 -31 9 775 373 299 21 28 chr13 24919502 24919515 -95364797 + B4 SINE B4 130 220 -72 9 775 676 204 7 29 chr13 24919528 24919664 -95364648 + B1_Mur3 SINE Alu 1 133 -16 9 775 225 306 43 35 chr13 24920411 24920526 -95363786 + RMER15 LTR ERVL 281 396 -179 9 775 898 239 23 37 chr13 24920674 24920891 -95363421 - ID_B1 SINE B4 0 224 11 9 775 280 198 171 12 chr13 24921036 24921118 -95363194 + PB1D9 SINE Alu 26 120 0 9 775 1226 20 7 7 chr13 24921119 24921266 -95363046 + B1_Mus2 SINE Alu 1 147 0 9 775 192 77 0 0 chr13 24921267 24921293 -95363019 + (A)n Simple_repeat Simple_repeat 1 26 0 9 775 323 154 26 0 chr13 24921387 24921465 -95362847 + L1Md_T LINE L1 6503 6582 0 9 775 409 315 9 0 chr13 24921845 24921953 -95362359 + B1_Mur2 SINE Alu 1 109 -40 9 775 219 45 43 43 chr13 24921957 24922003 -95362309 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 9 775 218 253 36 60 chr13 24922682 24922766 -95361546 + B1_Mur1 SINE Alu 61 142 -7 9 775 215 61 30 0 chr13 24923400 24923433 -95360879 + (CCCCCT)n Simple_repeat Simple_repeat 3 36 0 9 775 583 191 36 44 chr13 24924130 24924267 -95360045 - B1_Mur1 SINE Alu -1 148 13 9 775 222 37 0 0 chr13 24924286 24924313 -95359999 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 9 775 462 245 56 21 chr13 24924330 24924472 -95359840 - B1_Mur1 SINE Alu 0 149 3 9 775 227 274 99 59 chr13 24924868 24924969 -95359343 - B1F1 SINE Alu -2 147 43 9 775 1050 66 15 7 chr13 24925354 24925491 -95358821 - B1_Mus1 SINE Alu -9 139 2 9 775 425 231 121 24 chr13 24925492 24925616 -95358696 - B3 SINE B2 -80 136 1 9 775 328 259 156 4 chr13 24925827 24925937 -95358375 + B1F SINE Alu 1 122 -27 9 775 348 315 177 33 chr13 24926057 24926346 -95357966 + L1MC4 LINE L1 6740 7105 -937 9 775 1094 109 91 0 chr13 24926346 24926511 -95357801 - B2_Mm2 SINE B2 -14 181 2 9 775 348 310 182 36 chr13 24926511 24926743 -95357569 + L1MC4 LINE L1 7106 7364 -678 9 775 266 207 68 90 chr13 24926761 24926894 -95357418 + L1MC4 LINE L1 7461 7590 -452 9 775 462 157 0 0 chr13 24926894 24926977 -95357335 + (TA)n Simple_repeat Simple_repeat 2 84 0 9 775 385 231 66 0 chr13 24927334 24927425 -95356887 - RSINE1 SINE B4 -66 99 3 9 775 396 283 122 26 chr13 24927626 24927782 -95356530 - B4 SINE B4 -20 272 102 9 775 2331 122 66 91 chr13 24929256 24929638 -95354674 - BGLII_B LTR ERVK 0 441 69 9 775 1171 35 0 14 chr13 24929638 24929782 -95354530 - B1_Mus2 SINE Alu -5 142 1 9 775 2331 122 66 91 chr13 24929782 24929851 -95354461 - BGLII_B LTR ERVK -373 68 1 9 775 517 229 8 8 chr13 24929855 24929978 -95354334 - RMER3D-int LTR ERVK -5 2837 2715 9 775 219 36 0 0 chr13 24930194 24930222 -95354090 + (T)n Simple_repeat Simple_repeat 1 28 0 9 775 1056 23 0 0 chr13 24930222 24930355 -95353957 - B1_Mm SINE Alu 0 147 15 9 775 216 0 0 0 chr13 24930361 24930385 -95353927 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 9 775 1495 23 22 17 chr13 24930385 24930563 -95353749 - B2_Mm1t SINE B2 -13 180 2 9 775 223 349 70 57 chr13 24930588 24930746 -95353566 - RSINE1 SINE B4 0 165 6 9 775 277 281 62 10 chr13 24930784 24930881 -95353431 - RSINE1 SINE B4 -61 104 3 9 775 21 0 0 0 chr13 24930941 24930962 -95353350 + AT_rich Low_complexity Low_complexity 1 21 0 9 775 272 239 113 120 chr13 24931145 24931278 -95353034 - MTEb LTR MaLR -109 270 139 9 775 762 223 172 37 chr13 24931367 24931694 -95352618 - MTEa LTR MaLR -6 373 3 9 775 21 71 0 0 chr13 24932608 24932650 -95351662 + AT_rich Low_complexity Low_complexity 1 42 0 9 775 634 115 176 24 chr13 24932733 24932858 -95351454 + B1_Mus2 SINE Alu 2 145 -2 9 775 281 286 0 14 chr13 24934132 24934203 -95350109 + B1F SINE Alu 29 98 -51 9 775 1189 61 0 7 chr13 24934577 24934725 -95349587 + B1_Mus2 SINE Alu 1 147 0 1 775 1409 86 16 11 chr13 24934803 24934991 -95349321 - B2_Mm2 SINE B2 -5 190 2 1 775 526 200 88 0 chr13 24935801 24935926 -95348386 - B1_Mur3 SINE Alu 0 149 14 1 775 396 266 44 59 chr13 24936031 24936167 -95348145 - RSINE1 SINE B4 -29 136 3 1 775 297 0 0 0 chr13 24937576 24937609 -95346703 + (A)n Simple_repeat Simple_repeat 1 33 0 1 775 180 0 0 0 chr13 24938686 24938706 -95345606 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 775 263 279 24 37 chr13 24938826 24938908 -95345404 + MIRb SINE MIR 112 192 -76 1 775 1157 75 0 0 chr13 24939195 24939341 -95344971 + B1_Mus2 SINE Alu 2 147 0 1 775 180 0 0 0 chr13 24939341 24939361 -95344951 + (A)n Simple_repeat Simple_repeat 1 20 0 1 775 1128 51 0 0 chr13 24939370 24939508 -95344804 + B1_Mus1 SINE Alu 2 139 -9 1 775 309 82 0 0 chr13 24939508 24939557 -95344755 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 1 775 732 156 8 15 chr13 24939559 24939689 -95344623 - B1_Mur3 SINE Alu -20 129 1 1 775 388 288 45 15 chr13 24939572 24939706 -95344606 - B4 SINE B4 -87 205 68 1 775 251 222 0 0 chr13 24939750 24939804 -95344508 + ID_B1 SINE B4 170 223 -1 1 775 841 203 37 47 chr13 24939882 24940073 -95344239 - B3A SINE B2 -8 190 2 1 775 25 31 0 0 chr13 24940107 24940139 -95344173 + AT_rich Low_complexity Low_complexity 1 32 0 1 775 547 292 14 52 chr13 24940667 24940809 -95343503 + ID_B1 SINE B4 81 212 -12 1 775 221 250 17 0 chr13 24941360 24941420 -95342892 + (CTG)n Simple_repeat Simple_repeat 1 61 0 1 775 492 232 254 0 chr13 24941497 24941639 -95342673 + B3A SINE B2 3 180 -18 1 775 32 0 0 0 chr13 24941662 24941694 -95342618 + AT_rich Low_complexity Low_complexity 1 32 0 1 775 27 29 0 0 chr13 24941725 24941759 -95342553 + AT_rich Low_complexity Low_complexity 1 34 0 1 775 1611 156 85 59 chr13 24941951 24942305 -95342007 + ORR1C2 LTR MaLR 1 363 -21 1 775 242 163 191 67 chr13 24942819 24942924 -95341388 - RMER15 LTR ERVL -158 417 300 1 775 1211 113 37 5 chr13 24942940 24943127 -95341185 - B2_Mm2 SINE B2 -1 194 2 1 775 926 113 100 6 chr13 24943280 24943440 -95340872 - B2_Mm2 SINE B2 -19 176 2 1 775 369 211 11 0 chr13 24943452 24943542 -95340770 - MLT1E2 LTR MaLR -169 458 368 1 775 989 157 203 5 chr13 24943551 24943768 -95340544 - RLTR40 LTR ERVK -11 806 547 1 775 189 0 0 0 chr13 24943768 24943789 -95340523 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 775 601 206 0 27 chr13 24943789 24943899 -95340413 - B1_Mur2 SINE Alu -11 138 32 1 775 391 253 34 11 chr13 24944153 24944241 -95340071 - PB1D10 SINE Alu 0 117 28 1 775 1541 269 77 25 chr13 24944572 24944865 -95339447 + MER89 LTR ERV1 2 312 -247 1 775 2535 146 19 12 chr13 24944865 24945281 -95339031 - MTC LTR MaLR 0 421 3 1 775 1541 269 77 25 chr13 24945281 24945509 -95338803 + MER89 LTR ERV1 313 550 -9 1 775 561 201 109 22 chr13 24945546 24945683 -95338629 - B1_Mur2 SINE Alu 0 149 1 1 775 1155 71 80 34 chr13 24945735 24945911 -95338401 + B2_Mm2 SINE B2 3 186 -9 1 775 1438 71 22 0 chr13 24945918 24946102 -95338210 + B2_Mm2 SINE B2 2 189 -6 1 775 424 278 183 0 chr13 24946940 24947055 -95337257 - RSINE1 SINE B4 -29 136 1 1 775 413 282 104 30 chr13 24947402 24947434 -95336878 + B4 SINE B4 48 89 -203 1 775 676 195 8 25 chr13 24947434 24947555 -95336757 + PB1D9 SINE Alu 1 119 -1 1 775 241 336 26 0 chr13 24947838 24947954 -95336358 + (TGGA)n Simple_repeat Simple_repeat 1 119 0 1 775 207 0 0 0 chr13 24948054 24948077 -95336235 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 775 490 251 76 90 chr13 24948204 24948420 -95335892 - ID_B1 SINE B4 0 292 82 1 775 230 315 37 75 chr13 24950119 24950280 -95334032 - L2b LINE L2 -88 3287 3133 1 775 307 248 205 19 chr13 24950373 24950529 -95333783 - LTR48B LTR ERV1 -409 235 51 1 775 4585 169 50 27 chr13 24950733 24951709 -95332603 + RLTR22_Mur LTR ERVK 1 999 -849 1 775 2786 19 0 0 chr13 24951709 24952017 -95332295 + MERVL-int LTR ERVL 3589 3896 -1589 1 775 4410 122 31 167 chr13 24952017 24953022 -95331290 + RLTR22_Mur LTR ERVK 978 1845 -3 1 775 1002 209 87 42 chr13 24953038 24953312 -95331000 + MTE2b LTR MaLR 89 404 -3 1 775 680 227 8 0 chr13 24953399 24953531 -95330781 + ID_B1 SINE B4 86 218 -6 1 775 1157 68 0 0 chr13 24954785 24954933 -95329379 - B1_Mus1 SINE Alu 0 148 1 1 775 617 234 14 20 chr13 24954992 24955140 -95329172 + B1_Mur1 SINE Alu 1 147 -2 1 775 409 303 23 62 chr13 24955657 24955787 -95328525 + PB1 SINE Alu 1 125 -2 1 775 256 214 36 0 chr13 24956263 24956319 -95327993 + ID4_ SINE ID 18 75 -8 1 775 1657 165 45 118 chr13 24957091 24957224 -95327088 - ORR1C2 LTR MaLR -14 370 247 1 775 222 37 0 0 chr13 24957224 24957251 -95327061 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 1 775 1657 165 45 118 chr13 24957251 24957516 -95326796 - ORR1C2 LTR MaLR -138 246 1 1 775 195 139 0 0 chr13 24957557 24957593 -95326719 + (T)n Simple_repeat Simple_repeat 1 36 0 1 775 328 249 299 27 chr13 24958098 24958244 -95326068 + ID_B1 SINE B4 2 192 -32 1 775 1887 138 95 85 chr13 24958244 24958633 -95325679 - ORR1B1 LTR MaLR 0 394 2 1 775 328 272 131 39 chr13 24958633 24958651 -95325661 + ID_B1 SINE B4 193 208 -16 1 775 511 241 54 74 chr13 24959192 24959340 -95324972 + B1F SINE Alu 1 145 -4 1 775 277 282 91 69 chr13 24959204 24959222 -95325090 - YREP_Mm Unknown Unknown -1500 312 261 1 775 611 231 0 0 chr13 24959222 24959339 -95324973 + ID_B1 SINE B4 103 219 -5 1 775 277 282 91 69 chr13 24959339 24959379 -95324933 - YREP_Mm Unknown Unknown -1500 260 134 1 775 219 338 63 28 chr13 24959832 24959851 -95324461 - B1_Mur3 SINE Alu -1 148 1 1 775 373 308 16 32 chr13 24959851 24959975 -95324337 - ID_B1 SINE B4 -21 203 82 1 775 259 337 0 30 chr13 24960236 24960337 -95323975 - RLTR31_Mur LTR ERVK 0 553 456 1 775 515 289 63 93 chr13 24960508 24960840 -95323472 - RLTR17 LTR ERVK -266 426 105 1 775 248 196 0 21 chr13 24960847 24960894 -95323418 - ID4_ SINE ID -36 47 2 1 775 485 210 174 51 chr13 24960896 24961092 -95323220 - ID_B1 SINE B4 -2 222 3 1 775 392 0 0 20 chr13 24961106 24961155 -95323157 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 775 8189 50 5 0 chr13 24961206 24962182 -95322130 - L1_Mus1 LINE L1 0 6567 5587 1 775 420 214 52 26 chr13 24962194 24962309 -95322003 - RSINE1 SINE B4 -47 118 1 1 775 3225 66 5 0 chr13 24962444 24962838 -95321474 - MTA_Mm LTR MaLR 0 396 1 1 775 411 113 0 0 chr13 24963430 24963492 -95320820 + (T)n Simple_repeat Simple_repeat 1 62 0 1 775 1167 95 0 0 chr13 24963492 24963640 -95320672 - B1_Mus1 SINE Alu 0 148 1 1 775 831 158 0 0 chr13 24964344 24964490 -95319822 + CT-rich Low_complexity Low_complexity 4 149 0 1 775 320 246 0 14 chr13 24964860 24964934 -95319378 - ID2 SINE ID -9 74 2 1 775 1112 237 73 7 chr13 24965074 24965346 -95318966 - MTE2b LTR MaLR -11 368 79 1 775 1978 167 46 89 chr13 24965354 24965815 -95318497 + BGLII_B LTR ERVK 1 441 0 1 775 261 263 31 123 chr13 24965867 24965882 -95318430 - ID_B1 SINE B4 -20 204 87 1 775 322 240 17 130 chr13 24965882 24965997 -95318315 - B1_Mur2 SINE Alu -42 107 6 1 775 588 161 26 35 chr13 24966055 24966171 -95318141 - PB1D9 SINE Alu -5 115 1 1 775 256 301 45 64 chr13 24966563 24966673 -95317639 - RMER4B LTR ERVK -451 134 27 1 775 486 216 9 9 chr13 24966909 24967021 -95317291 - PB1D9 SINE Alu -8 112 1 1 775 337 222 0 0 chr13 24967051 24967114 -95317198 - ID4_ SINE ID -19 64 2 1 775 376 303 28 0 chr13 24967122 24967231 -95317081 - B1F SINE Alu -1 148 37 1 775 1895 216 54 15 chr13 24967244 24967634 -95316678 - MTD LTR MaLR -14 405 1 1 775 180 365 48 0 chr13 24968525 24968588 -95315724 - L2b LINE L2 -47 3328 3263 1 775 1460 40 0 22 chr13 24968786 24968966 -95315346 + B2_Mm2 SINE B2 4 179 -16 1 775 684 93 0 0 chr13 24968966 24969063 -95315249 + (GGAA)n Simple_repeat Simple_repeat 2 98 0 1 775 717 168 243 0 chr13 24969459 24969632 -95314680 - B3 SINE B2 -1 215 1 1 775 242 286 32 0 chr13 24969638 24969701 -95314611 - MIRm SINE MIR -13 263 199 1 775 265 220 34 0 chr13 24969723 24969782 -95314530 + CT-rich Low_complexity Low_complexity 5 65 0 1 775 429 280 0 48 chr13 24970083 24970188 -95314124 + PB1D10 SINE Alu 6 105 -12 1 775 1734 21 0 0 chr13 24970503 24970696 -95313616 - B2_Mm1a SINE B2 0 193 1 1 775 560 165 39 94 chr13 24970701 24970828 -95313484 - PB1D9 SINE Alu 0 120 1 1 775 201 355 31 62 chr13 24970830 24970959 -95313353 - MIRc SINE MIR -114 154 30 1 775 551 208 0 36 chr13 24971076 24971186 -95313126 + PB1D10 SINE Alu 5 110 -7 1 775 183 42 0 0 chr13 24972055 24972079 -95312233 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 775 248 91 23 0 chr13 24972079 24972123 -95312189 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 775 361 164 0 0 chr13 24972128 24972183 -95312129 - RSINE1 SINE B4 -39 126 72 1 775 336 278 133 10 chr13 24972260 24972358 -95311954 - ID_B1 SINE B4 -63 161 52 1 775 811 272 57 77 chr13 24972893 24973192 -95311120 - MLT1A LTR MaLR -43 331 39 1 775 226 184 0 0 chr13 24973395 24973433 -95310879 - RMER30 DNA MER1_type -153 49 12 1 775 210 371 11 0 chr13 24973540 24973629 -95310683 - MIRc SINE MIR -96 172 83 1 775 237 33 0 0 chr13 24974638 24974668 -95309644 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 775 773 209 52 111 chr13 24974668 24974840 -95309472 - B3A SINE B2 -31 164 3 1 775 245 29 29 0 chr13 24975132 24975166 -95309146 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1 775 527 275 7 35 chr13 24975215 24975358 -95308954 - ID_B1 SINE B4 0 224 86 1 775 2336 156 23 3 chr13 24976143 24976529 -95307783 + ORR1B1 LTR MaLR 1 394 0 1 775 874 255 29 39 chr13 24976541 24976749 -95307563 + MTE2a LTR MaLR 8 213 -166 1 775 316 154 0 37 chr13 24976752 24976806 -95307506 + B4A SINE B4 164 215 -77 1 775 1020 224 4 49 chr13 24976808 24977033 -95307279 + B3 SINE B2 2 216 0 1 775 367 297 0 0 chr13 24977067 24977158 -95307154 + B4 SINE B4 200 290 -2 1 775 278 252 10 0 chr13 24977193 24977292 -95307020 + (TA)n Simple_repeat Simple_repeat 2 101 0 1 775 1230 216 97 72 chr13 24977671 24978020 -95306292 + ORR1E LTR MaLR 2 359 0 1 775 883 131 8 0 chr13 24978456 24978586 -95305726 + B1_Mus2 SINE Alu 1 131 -16 1 775 244 262 0 12 chr13 24978745 24978826 -95305486 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 775 269 261 101 0 chr13 24978826 24978895 -95305417 - ID4_ SINE ID -6 77 2 1 775 461 300 62 0 chr13 24979247 24979377 -95304935 - B1F2 SINE Alu -11 138 1 1 775 219 146 0 0 chr13 24979389 24979430 -95304882 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 775 879 191 0 20 chr13 24979443 24979593 -95304719 - B1_Mus2 SINE Alu 0 147 1 1 775 228 111 0 0 chr13 24980275 24980311 -95304001 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 775 729 259 0 0 chr13 24980317 24980460 -95303852 - ID_B1 SINE B4 0 224 82 1 775 226 358 13 69 chr13 24980322 24980481 -95303831 + YREP_Mm Unknown Unknown 182 331 -1481 1 775 715 247 14 0 chr13 24980701 24980847 -95303465 - B1_Mur3 SINE Alu 0 149 2 1 775 1011 255 13 52 chr13 24981007 24981239 -95303073 + ID_B1 SINE B4 1 223 -1 1 775 208 175 17 34 chr13 24981249 24981308 -95303004 + GA-rich Low_complexity Low_complexity 1 58 0 1 775 287 206 41 0 chr13 24982049 24982146 -95302166 + (TA)n Simple_repeat Simple_repeat 2 102 0 1 775 490 200 27 18 chr13 24983352 24983464 -95300848 - B1_Mur2 SINE Alu -1 148 36 1 775 1181 68 0 33 chr13 24983538 24983551 -95300761 - B1_Mus1 SINE Alu 0 148 137 1 775 203 0 0 36 chr13 24983551 24983579 -95300733 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 1 775 1181 68 0 33 chr13 24983579 24983718 -95300594 - B1_Mus1 SINE Alu -12 136 1 1 775 367 195 83 68 chr13 24984047 24984179 -95300133 - RLTR13D3 LTR ERVK -42 1072 939 1 775 1314 81 42 31 chr13 24984194 24984386 -95299926 + B2_Mm2 SINE B2 2 195 0 1 775 299 281 83 47 chr13 24984974 24985163 -95299149 - RLTR13D3 LTR ERVK -838 185 1 1 775 1216 55 0 0 chr13 24985529 24985675 -95298637 + B1_Mus1 SINE Alu 3 148 0 1 775 2443 139 58 16 chr13 24986213 24986644 -95297668 - RLTR11B LTR ERVK 0 453 5 1 775 1880 134 113 31 chr13 24986717 24987072 -95297240 + ORR1B1 LTR MaLR 2 385 -9 1 775 414 0 0 0 chr13 24987087 24987133 -95297179 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 775 234 217 0 0 chr13 24987170 24987216 -95297096 - MTEa LTR MaLR -19 360 315 1 775 722 295 34 92 chr13 24987718 24988046 -95296266 - MTEa LTR MaLR -61 318 10 1 775 1517 40 0 0 chr13 24988157 24988330 -95295982 - B2_Mm1a SINE B2 -19 174 2 1 775 211 297 120 11 chr13 24988549 24988641 -95295671 - MIRc SINE MIR -45 223 122 1 775 646 266 73 10 chr13 24988741 24988946 -95295366 - MLT1A0 LTR MaLR -6 359 142 1 775 528 16 0 0 chr13 24989072 24989133 -95295179 + (TTCCC)n Simple_repeat Simple_repeat 5 65 0 1 775 744 75 94 0 chr13 24989150 24989256 -95295056 - B1_Mm SINE Alu 0 147 32 1 775 276 259 108 100 chr13 24989193 24989294 -95295018 - RLTR25B LTR ERVK -519 509 408 1 775 3122 172 8 57 chr13 24989294 24989886 -95294426 - RLTR20B1 LTR ERVK 0 563 1 1 775 241 283 87 0 chr13 24989890 24989982 -95294330 - MLT1A0 LTR MaLR -265 100 1 1 775 1183 151 236 58 chr13 24990070 24990361 -95293951 - ORR1B2 LTR MaLR 0 374 3 1 775 537 234 105 0 chr13 24990701 24990825 -95293487 + RSINE1 SINE B4 5 141 -24 1 775 1179 62 7 0 chr13 24990909 24991054 -95293258 - B1_Mus1 SINE Alu 0 148 3 1 775 630 239 118 16 chr13 24992574 24992709 -95291603 + B3 SINE B2 1 140 -76 1 775 675 94 0 0 chr13 24992709 24992805 -95291507 + (CAG)n Simple_repeat Simple_repeat 1 96 0 1 775 630 239 118 16 chr13 24992805 24992856 -95291456 + B3 SINE B2 141 205 -11 1 775 453 283 8 32 chr13 24993022 24993146 -95291166 + ID_B1 SINE B4 104 224 0 1 775 211 293 107 24 chr13 24993635 24993719 -95290593 - MIR SINE MIR -86 122 32 1 775 869 141 220 5 chr13 24994167 24994353 -95289959 - URR1A DNA MER1_type 0 226 1 1 775 676 57 0 0 chr13 24994470 24994558 -95289754 + B2_Mm2 SINE B2 8 95 -100 1 775 507 256 42 25 chr13 24994625 24994745 -95289567 + ID_B1 SINE B4 101 222 -2 1 775 615 250 0 0 chr13 24994769 24994893 -95289419 + RSINE1 SINE B4 7 130 -35 1 775 351 0 0 0 chr13 24994919 24994958 -95289354 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 775 1216 55 7 0 chr13 24994978 24995124 -95289188 + B1_Mm SINE Alu 1 147 0 1 775 26 0 0 0 chr13 24995191 24995217 -95289095 + AT_rich Low_complexity Low_complexity 1 26 0 1 775 233 290 86 14 chr13 24995688 24995758 -95288554 - ID4 SINE ID -8 75 1 1 775 387 259 121 82 chr13 24995769 24995918 -95288394 + MER58B DNA MER1_type 89 249 -92 1 775 1146 102 15 79 chr13 24995918 24996121 -95288191 - B2_Mm2 SINE B2 -4 191 2 1 775 387 259 121 82 chr13 24996121 24996177 -95288135 + MER58B DNA MER1_type 250 302 -39 1 775 848 189 7 13 chr13 24996177 24996327 -95287985 + B1_Mur2 SINE Alu 1 149 0 1 775 392 0 21 0 chr13 24996328 24996376 -95287936 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 775 1055 139 0 6 chr13 24996548 24996729 -95287583 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 775 399 281 135 63 chr13 24997327 24997632 -95286680 + ORR1E LTR MaLR 8 350 -29 1 775 439 248 128 0 chr13 24998578 24998703 -95285609 + MLT1B LTR MaLR 26 166 -224 1 775 236 309 62 0 chr13 25000070 25000151 -95284161 - MER58B DNA MER1_type -1 340 255 1 775 231 265 26 121 chr13 25000396 25000512 -95283800 + MLT1H2 LTR MaLR 319 423 -66 2 775 301 277 200 11 chr13 25000540 25000635 -95283677 + PB1 SINE Alu 11 123 -4 3 775 880 215 18 41 chr13 25001039 25001257 -95283055 + B3 SINE B2 1 213 -3 4 775 499 202 33 141 chr13 25001699 25001883 -95282429 - RSINE1 SINE B4 0 165 2 5 775 373 225 11 11 chr13 25002352 25002442 -95281870 + PB1D10 SINE Alu 21 110 -7 6 775 306 259 16 0 chr13 25002460 25002544 -95281768 + BC1_Mm scRNA scRNA 2 88 -64 7 775 476 239 9 9 chr13 25002674 25002788 -95281524 + PB1D10 SINE Alu 3 116 -1 8 775 180 125 0 0 chr13 25002800 25002832 -95281480 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 9 775 726 189 22 7 chr13 25004463 25004602 -95279710 + B3 SINE B2 6 146 -70 1 775 385 252 172 0 chr13 25004842 25004941 -95279371 + PB1D10 SINE Alu 1 116 -1 1 775 432 267 5 43 chr13 25005053 25005247 -95279065 + B4 SINE B4 55 281 -11 1 775 1365 57 0 0 chr13 25005381 25005556 -95278756 + (TC)n Simple_repeat Simple_repeat 2 176 0 1 775 288 119 0 0 chr13 25005882 25005924 -95278388 + RSINE1 SINE B4 62 103 -62 1 775 520 242 0 0 chr13 25006302 25006401 -95277911 + B3A SINE B2 12 110 -88 1 775 431 248 141 0 chr13 25006953 25007074 -95277238 + RSINE1 SINE B4 9 146 -19 1 775 192 111 0 0 chr13 25007460 25007496 -95276816 + (A)n Simple_repeat Simple_repeat 1 36 0 1 775 619 218 189 24 chr13 25008235 25008404 -95275908 + B3A SINE B2 1 197 -1 1 775 274 296 12 12 chr13 25008404 25008486 -95275826 + ID4_ SINE ID 2 83 0 1 775 29 0 0 0 chr13 25008486 25008515 -95275797 + AT_rich Low_complexity Low_complexity 1 29 0 2 775 705 237 140 0 chr13 25008535 25008721 -95275591 + B3 SINE B2 1 212 -4 2 775 272 294 129 0 chr13 25009211 25009296 -95275016 + B1F SINE Alu 48 143 -6 2 775 806 279 80 19 chr13 25009817 25010080 -95274232 + B4A SINE B4 1 279 -13 2 775 277 125 0 20 chr13 25011092 25011141 -95273171 - Lx8 LINE L1 -2 7471 7424 2 775 787 138 68 55 chr13 25011326 25011472 -95272840 + B1_Mur1 SINE Alu 2 149 0 2 775 779 231 0 20 chr13 25011828 25011978 -95272334 + ID_B1 SINE B4 73 219 -5 2 775 541 259 116 39 chr13 25011986 25012167 -95272145 + B3A SINE B2 2 196 -2 2 775 348 245 71 54 chr13 25012652 25012764 -95271548 - B1F SINE Alu -14 135 22 2 775 269 196 128 13 chr13 25013320 25013408 -95270904 - PB1D10 SINE Alu -1 119 19 2 775 598 294 79 35 chr13 25013524 25013753 -95270559 + MTEb LTR MaLR 140 378 -1 3 775 351 275 0 0 chr13 25014139 25014219 -95270093 - ID4_ SINE ID -2 81 2 3 775 397 216 167 35 chr13 25014249 25014393 -95269919 - MTEa LTR MaLR -13 366 204 3 775 335 223 122 16 chr13 25014443 25014538 -95269774 - PB1 SINE Alu -16 104 10 3 775 226 350 148 33 chr13 25014790 25015000 -95269312 - MER34A LTR ERV1 -317 254 21 3 775 418 241 73 29 chr13 25015028 25015165 -95269147 + RSINE1 SINE B4 4 146 -19 3 775 419 329 88 25 chr13 25015230 25015513 -95268799 - L2a LINE L2 -317 3109 2815 3 775 386 165 184 10 chr13 25015558 25015656 -95268656 + B3A SINE B2 1 115 -83 3 775 213 154 0 0 chr13 25015662 25015701 -95268611 + (TCCA)n Simple_repeat Simple_repeat 4 42 0 3 775 3043 36 0 22 chr13 25016217 25016612 -95267700 - L1Md_F2 LINE L1 0 6582 6204 3 775 285 309 129 8 chr13 25016618 25016742 -95267570 - MER58A DNA MER1_type -64 160 22 4 775 609 157 67 29 chr13 25016873 25016978 -95267334 - B3A SINE B2 -89 109 1 4 775 507 284 39 35 chr13 25017018 25017219 -95267093 - MIR SINE MIR -23 245 53 4 775 208 257 25 110 chr13 25017347 25017465 -95266847 + L2c LINE L2 3278 3385 -2 4 775 908 251 116 27 chr13 25018364 25018692 -95265620 + Lx8 LINE L1 7115 7471 -2 4 775 764 181 75 1 chr13 25018719 25018858 -95265454 + B3 SINE B2 9 153 -42 4 775 387 0 0 0 chr13 25018858 25018901 -95265411 + (CATA)n Simple_repeat Simple_repeat 4 46 0 4 775 666 247 40 17 chr13 25018901 25018934 -95265378 + B2_Mm2 SINE B2 154 184 -11 4 775 852 237 21 21 chr13 25018982 25019176 -95265136 - B3A SINE B2 -3 195 2 4 775 368 276 61 38 chr13 25019607 25019739 -95264573 + MLT2B2 LTR ERVL 5 139 -376 4 775 299 176 0 0 chr13 25019798 25019849 -95264463 + PB1 SINE Alu 42 92 -35 4 775 578 241 121 0 chr13 25019838 25020004 -95264308 - ID_B1 SINE B4 -34 190 5 5 775 896 251 29 0 chr13 25020401 25020608 -95263704 + ID_B1 SINE B4 1 213 -11 5 775 516 242 144 60 chr13 25020719 25020886 -95263426 + B3A SINE B2 2 182 -16 5 775 205 217 32 32 chr13 25020901 25020963 -95263349 + (CATA)n Simple_repeat Simple_repeat 1 62 0 5 775 319 308 13 119 chr13 25021128 25021268 -95263044 + MLT1C LTR MaLR 52 175 -215 5 775 570 228 10 0 chr13 25021268 25021393 -95262919 + B1_Mur1 SINE Alu 2 128 -21 5 775 261 0 0 0 chr13 25021402 25021431 -95262881 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 775 407 370 14 48 chr13 25021482 25021692 -95262620 + MLT1C LTR MaLR 253 455 -12 5 775 434 356 25 0 chr13 25021853 25022013 -95262299 - Tigger5 DNA MER2_type -2234 172 9 5 775 547 281 117 10 chr13 25022241 25022446 -95261866 + MLT1D LTR MaLR 22 248 -257 5 775 255 250 0 0 chr13 25022466 25022514 -95261798 + MLT1D LTR MaLR 313 360 -145 5 775 773 200 14 14 chr13 25022533 25022680 -95261632 + B1_Mus2 SINE Alu 1 147 0 5 775 1119 143 21 0 chr13 25022685 25022874 -95261438 + B2_Mm1t SINE B2 1 193 0 6 775 307 274 75 40 chr13 25023090 25023292 -95261020 + MTEa LTR MaLR 155 361 -18 6 775 1443 223 85 9 chr13 25024016 25024346 -95259966 - MTD LTR MaLR -64 355 1 6 775 3915 188 96 146 chr13 25024346 25024637 -95259675 - MTD-int LTR MaLR 0 1258 1045 6 775 3133 67 13 3 chr13 25024637 25025029 -95259283 + MTA_Mm LTR MaLR 1 396 0 6 775 3915 188 96 146 chr13 25025029 25026061 -95258251 - MTD-int LTR MaLR -214 1044 1 6 775 1654 210 105 11 chr13 25026202 25026573 -95257739 - MTD LTR MaLR -13 406 1 6 775 616 266 38 0 chr13 25026578 25026736 -95257576 - Lx8 LINE L1 -972 6501 6338 6 775 586 263 107 31 chr13 25026767 25026991 -95257321 + Lx8 LINE L1 6133 6373 -1100 6 775 259 299 67 67 chr13 25027169 25027348 -95256964 + L2 LINE L2 2884 3062 -357 6 775 236 233 196 72 chr13 25027388 25027485 -95256827 + MLT1B LTR MaLR 1 109 -281 6 775 353 258 23 51 chr13 25027520 25027663 -95256649 + MLT1B LTR MaLR 221 401 -66 6 775 2273 146 72 13 chr13 25027635 25028025 -95256287 - MTC LTR MaLR -8 413 1 6 775 467 244 220 6 chr13 25028250 25028423 -95255889 - B3 SINE B2 -6 210 1 6 775 234 45 22 43 chr13 25028851 25028897 -95255415 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 775 21 71 0 0 chr13 25029514 25029556 -95254756 + GC_rich Low_complexity Low_complexity 1 42 0 7 775 316 255 87 10 chr13 25030414 25030517 -95253795 - PB1D10 SINE Alu -2 115 5 7 775 209 265 0 0 chr13 25030928 25030977 -95253335 + CT-rich Low_complexity Low_complexity 2 50 0 7 775 352 252 112 0 chr13 25031042 25031149 -95253163 - B1F SINE Alu -30 119 1 7 775 392 179 0 0 chr13 25031694 25031761 -95252551 - RSINE1 SINE B4 -69 96 30 7 775 260 347 10 21 chr13 25031809 25031906 -95252406 + ID_B1 SINE B4 60 155 -69 7 775 631 297 27 63 chr13 25031908 25032131 -95252181 + B4 SINE B4 2 216 -76 7 775 291 28 0 0 chr13 25032135 25032171 -95252141 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 775 183 80 0 0 chr13 25032214 25032239 -95252073 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 775 388 253 0 0 chr13 25032482 25032561 -95251751 + ID4 SINE ID 2 80 -3 8 775 386 353 80 0 chr13 25032657 25032844 -95251468 - MIR SINE MIR -16 246 45 8 775 918 290 58 25 chr13 25033003 25033279 -95251033 - B4A SINE B4 -4 288 4 8 775 243 0 0 0 chr13 25033286 25033313 -95250999 + (A)n Simple_repeat Simple_repeat 1 27 0 8 775 633 171 0 37 chr13 25033621 25033730 -95250582 - RSINE1 SINE B4 -60 105 1 8 775 271 294 45 27 chr13 25033730 25033842 -95250470 - PB1D7 SINE Alu -2 118 5 8 775 352 267 13 0 chr13 25034209 25034284 -95250028 + ID_B1 SINE B4 96 171 -53 8 775 264 77 0 0 chr13 25034364 25034403 -95249909 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 8 776 192 77 0 0 chr13 25035626 25035652 -95248660 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 8 776 483 306 16 0 chr13 25035657 25035781 -95248531 - B1F2 SINE Alu -13 136 11 8 776 536 264 81 21 chr13 25035821 25036007 -95248305 - B3A SINE B2 0 198 2 9 776 1833 180 91 0 chr13 25036680 25037064 -95247248 + MTD LTR MaLR 1 419 0 9 776 264 134 330 0 chr13 25037132 25037229 -95247083 - L1MA9 LINE L1 -19 6293 6165 9 776 360 296 9 9 chr13 25038050 25038159 -95246153 + PB1D7 SINE Alu 5 113 -7 9 776 984 63 0 0 chr13 25038159 25038285 -95246027 + B1_Mus1 SINE Alu 23 148 0 9 776 819 259 44 10 chr13 25038640 25038843 -95245469 + B3 SINE B2 2 211 -5 9 776 207 0 0 0 chr13 25039070 25039093 -95245219 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 9 776 394 265 35 0 chr13 25039208 25039320 -95244992 - MIRb SINE MIR -81 187 65 9 776 567 188 45 38 chr13 25039383 25039516 -95244796 + B1_Mur3 SINE Alu 1 134 -15 9 776 195 125 0 0 chr13 25039517 25039557 -95244755 + (CAAT)n Simple_repeat Simple_repeat 4 43 0 9 776 440 309 5 114 chr13 25039674 25039875 -95244437 + B3A SINE B2 4 182 -16 1 776 26 0 0 0 chr13 25040222 25040248 -95244064 + AT_rich Low_complexity Low_complexity 1 26 0 1 776 355 253 0 0 chr13 25040272 25040351 -95243961 - ID4 SINE ID -2 81 3 1 776 345 82 0 0 chr13 25040484 25040533 -95243779 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 776 339 25 0 0 chr13 25040533 25040573 -95243739 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 776 346 298 56 119 chr13 25040920 25041080 -95243232 + RSINE1 SINE B4 3 152 -13 1 776 401 371 23 0 chr13 25041899 25042031 -95242281 + ID_B1 SINE B4 84 218 -6 1 776 868 202 73 6 chr13 25042240 25042419 -95241893 - B3A SINE B2 0 198 8 1 776 538 261 36 0 chr13 25042465 25042603 -95241709 + RSINE1 SINE B4 4 146 -19 1 776 186 103 0 0 chr13 25042609 25042638 -95241674 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 776 3074 140 37 8 chr13 25042764 25043274 -95241038 - RLTR11A2 LTR ERVK -2 525 1 1 776 378 0 0 0 chr13 25043938 25043980 -95240332 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 776 758 174 58 7 chr13 25043980 25044119 -95240193 - B1_Mur3 SINE Alu -2 147 2 1 776 243 61 0 0 chr13 25044136 25044169 -95240143 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 776 264 349 0 12 chr13 25044178 25044262 -95240050 - Charlie18a DNA MER1_type -253 89 7 1 776 426 248 155 31 chr13 25044260 25044389 -95239923 + ID_B1 SINE B4 80 224 0 1 776 773 218 9 81 chr13 25044875 25045085 -95239227 + B3A SINE B2 2 196 -2 1 776 233 192 19 19 chr13 25045367 25045420 -95238892 - LTR33 LTR ERVL -53 462 410 1 776 311 364 35 94 chr13 25045477 25045680 -95238632 - LTR33 LTR ERVL -230 285 95 1 776 245 154 0 0 chr13 25045681 25045720 -95238592 - B1_Mur4 SINE Alu -104 46 8 1 776 492 18 0 0 chr13 25046157 25046214 -95238098 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 1 776 672 233 21 57 chr13 25046258 25046425 -95237887 - ID_B1 SINE B4 -47 245 82 1 776 743 253 0 43 chr13 25046535 25046696 -95237616 + RSINE1 SINE B4 11 164 -1 1 776 2370 95 39 92 chr13 25047238 25047653 -95236659 - RLTR9C LTR ERVK 0 393 1 1 776 291 250 29 14 chr13 25048095 25048164 -95236148 + ID4 SINE ID 13 82 -1 1 776 338 0 24 0 chr13 25048503 25048545 -95235767 + (TTTTTG)n Simple_repeat Simple_repeat 6 48 0 1 776 1252 34 7 0 chr13 25048545 25048691 -95235621 - B1_Mus1 SINE Alu 0 148 2 1 776 1206 207 14 5 chr13 25048724 25048933 -95235379 - B3 SINE B2 0 216 6 1 776 501 115 0 0 chr13 25048968 25049046 -95235266 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 776 288 77 0 0 chr13 25049495 25049534 -95234778 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 776 654 213 43 43 chr13 25049602 25049764 -95234548 - RSINE1 SINE B4 0 165 4 1 776 748 136 129 0 chr13 25049845 25049977 -95234335 - B1_Mur3 SINE Alu 0 149 1 1 776 546 229 34 20 chr13 25050248 25050395 -95233917 + B1F1 SINE Alu 1 149 0 1 776 1209 34 0 13 chr13 25050477 25050626 -95233686 - B1_Mus2 SINE Alu 0 147 1 1 776 606 75 0 0 chr13 25050939 25051032 -95233280 + (TC)n Simple_repeat Simple_repeat 2 94 0 1 776 189 0 0 0 chr13 25051032 25051052 -95233260 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 776 210 352 68 20 chr13 25051160 25051190 -95233122 - ID_B1 SINE B4 0 224 117 1 776 278 304 47 47 chr13 25051190 25051297 -95233015 - PB1D10 SINE Alu -10 107 1 1 776 210 352 68 20 chr13 25051297 25051308 -95233004 - ID_B1 SINE B4 0 116 70 1 776 941 94 0 0 chr13 25051447 25051574 -95232738 - B1_Mus1 SINE Alu 0 148 22 1 776 308 331 107 7 chr13 25051574 25051714 -95232598 - L1M5 LINE L1 -971 5175 5022 1 776 207 69 0 0 chr13 25051731 25051760 -95232552 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 776 498 277 66 0 chr13 25051770 25051907 -95232405 - B3A SINE B2 -42 156 11 1 776 660 251 69 25 chr13 25052147 25052351 -95231961 - ORR1C2 LTR MaLR 0 384 172 1 776 203 171 0 0 chr13 25052352 25052393 -95231919 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 1 776 261 217 0 0 chr13 25052415 25052461 -95231851 - ORR1C2 LTR MaLR -335 49 4 1 776 1335 238 141 21 chr13 25052571 25052996 -95231316 + Lx8 LINE L1 6819 7294 -179 1 776 22 0 0 0 chr13 25053122 25053144 -95231168 + AT_rich Low_complexity Low_complexity 1 22 0 1 776 596 274 14 0 chr13 25053551 25053697 -95230615 + B1F SINE Alu 1 148 -1 1 776 224 337 0 0 chr13 25053710 25053796 -95230516 + (CA)n Simple_repeat Simple_repeat 1 86 0 1 776 276 283 50 18 chr13 25053936 25054050 -95230262 + MIR SINE MIR 81 191 -71 1 776 603 307 80 18 chr13 25055732 25056007 -95228305 - B4A SINE B4 0 292 1 1 776 207 0 0 0 chr13 25056065 25056088 -95228224 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 776 252 0 0 0 chr13 25056115 25056143 -95228169 + (T)n Simple_repeat Simple_repeat 1 28 0 1 776 509 236 231 43 chr13 25056143 25056329 -95227983 - B4 SINE B4 -69 223 3 1 776 260 342 106 13 chr13 25056423 25056574 -95227738 + MIRb SINE MIR 103 267 -1 1 776 348 191 0 0 chr13 25056667 25056751 -95227561 + CT-rich Low_complexity Low_complexity 3 86 0 1 776 942 186 27 145 chr13 25057255 25057620 -95226692 - RLTRETN_Mm LTR ERVK 0 322 1 1 776 932 94 8 15 chr13 25059452 25059582 -95224730 - B1_Mus2 SINE Alu -7 140 12 1 776 232 210 133 95 chr13 25059457 25059615 -95224697 + YREP_Mm Unknown Unknown 174 337 -1475 1 776 543 168 14 27 chr13 25059774 25059921 -95224391 + CT-rich Low_complexity Low_complexity 1 145 0 1 776 270 316 26 13 chr13 25059921 25059998 -95224314 - ID4_ SINE ID -1 82 5 1 776 470 193 9 59 chr13 25060619 25060725 -95223587 - B1F1 SINE Alu -12 115 5 1 776 301 257 29 0 chr13 25060668 25060738 -95223574 - B4A SINE B4 -146 146 75 1 776 319 318 11 89 chr13 25061174 25061364 -95222948 + MER45A DNA Tip100 2 176 -2 1 776 1127 247 82 65 chr13 25061465 25061833 -95222479 - MTEa LTR MaLR -5 374 1 1 776 420 259 36 27 chr13 25062261 25062372 -95221940 + PB1D7 SINE Alu 9 120 0 1 776 899 163 173 35 chr13 25062532 25062729 -95221583 - URR1B DNA MER1_type 0 225 2 1 776 260 349 30 37 chr13 25062858 25062992 -95221320 + B4 SINE B4 78 210 -82 1 776 367 297 0 43 chr13 25062884 25063000 -95221312 + B1_Mur1 SINE Alu 18 128 -21 1 776 2227 113 25 3 chr13 25063602 25063921 -95220391 - ORR1A3 LTR MaLR 0 326 1 1 776 2083 230 7 17 chr13 25064098 25064520 -95219792 - MTD LTR MaLR -15 404 1 1 776 691 171 236 6 chr13 25064563 25064728 -95219584 - B3 SINE B2 -13 203 1 1 776 613 231 14 63 chr13 25065020 25065163 -95219149 + B1_Mur2 SINE Alu 13 148 -1 1 776 1196 162 26 83 chr13 25065632 25065934 -95218378 - RLTR11A LTR ERVK -22 506 222 1 776 362 241 13 0 chr13 25065919 25065998 -95218314 - RLTR11A LTR ERVK -447 80 1 1 776 1310 265 100 53 chr13 25066411 25066593 -95217719 - RMER5 LTR ERV1 -15 519 340 1 776 775 212 0 0 chr13 25066593 25066730 -95217582 + B1_Mur1 SINE Alu 2 138 -11 1 776 384 22 0 0 chr13 25066730 25066775 -95217537 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 1 776 1310 265 100 53 chr13 25066775 25067041 -95217271 - RMER5 LTR ERV1 -195 339 50 1 776 225 0 0 0 chr13 25067098 25067123 -95217189 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1 776 380 246 0 6 chr13 25067706 25067803 -95216509 - ID4 SINE ID -43 109 15 1 776 311 212 30 15 chr13 25067743 25067810 -95216502 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 1 776 790 266 42 37 chr13 25067780 25068393 -95215919 - ZP3AR Satellite Satellite -80 615 1 1 776 1146 72 46 0 chr13 25068603 25068755 -95215557 + B2_Mm2 SINE B2 3 161 -34 1 776 231 61 0 0 chr13 25068755 25068788 -95215524 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 1 776 261 0 0 0 chr13 25068789 25068818 -95215494 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 776 369 186 153 10 chr13 25068819 25068917 -95215395 - B1F SINE Alu -11 138 27 1 776 336 318 70 12 chr13 25070373 25070545 -95213767 + MER3 DNA MER1_type 12 193 -16 1 776 486 221 6 119 chr13 25070645 25070804 -95213508 + B1F SINE Alu 1 141 -8 1 776 390 91 0 0 chr13 25070814 25070869 -95213443 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 776 246 306 0 0 chr13 25070879 25070951 -95213361 + ID4_ SINE ID 2 73 -10 1 776 267 31 0 0 chr13 25070951 25070983 -95213329 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 776 860 190 31 6 chr13 25072023 25072182 -95212130 + RSINE1 SINE B4 3 165 0 1 776 628 225 31 8 chr13 25072598 25072728 -95211584 - ID_B1 SINE B4 -8 216 84 1 776 414 189 142 39 chr13 25073143 25073270 -95211042 - MLT1B LTR MaLR -26 364 225 1 776 858 181 0 7 chr13 25073347 25073486 -95210826 - B3 SINE B2 -78 138 1 1 776 905 288 74 45 chr13 25073486 25073890 -95210422 - RMER5 LTR ERV1 -40 494 79 1 776 490 259 95 5 chr13 25073911 25074101 -95210211 - MLT1B LTR MaLR -143 247 41 1 776 516 176 44 0 chr13 25075012 25075103 -95209209 + ID_B1 SINE B4 124 218 -6 1 776 581 252 35 46 chr13 25075127 25075291 -95209021 + B3A SINE B2 47 206 -10 1 776 35 0 0 0 chr13 25075291 25075326 -95208986 + AT_rich Low_complexity Low_complexity 1 35 0 1 776 485 297 45 18 chr13 25076197 25076369 -95207943 - ID_B1 SINE B4 0 224 53 1 776 729 221 28 14 chr13 25077072 25077214 -95207098 + B1_Mur2 SINE Alu 6 149 0 1 776 258 336 0 0 chr13 25077360 25077464 -95206848 - PB1D9 SINE Alu -12 108 5 1 776 639 206 128 0 chr13 25078073 25078214 -95206098 + RSINE1 SINE B4 3 161 -4 1 776 596 264 8 0 chr13 25078316 25078437 -95205875 + ID_B1 SINE B4 87 208 -16 2 776 430 294 30 38 chr13 25079373 25079504 -95204808 - RSINE1 SINE B4 0 165 36 2 776 1573 121 4 9 chr13 25079555 25079781 -95204531 - URR1B DNA MER1_type 0 225 1 2 776 301 315 66 22 chr13 25079850 25080032 -95204280 - L1MC LINE L1 -2071 5811 5622 2 776 22 56 0 0 chr13 25080044 25080080 -95204232 + AT_rich Low_complexity Low_complexity 1 36 0 2 776 587 189 134 0 chr13 25080101 25080228 -95204084 + B1F SINE Alu 1 144 -5 2 776 418 329 52 12 chr13 25081446 25081618 -95202694 + MARNA DNA Mariner 252 430 -156 2 776 305 210 0 16 chr13 25082588 25082651 -95201661 + MTEb LTR MaLR 294 355 -24 2 776 250 192 19 0 chr13 25083931 25083983 -95200329 - PB1D10 SINE Alu -3 114 62 2 776 498 292 7 21 chr13 25083967 25084107 -95200205 - B1F1 SINE Alu -11 138 1 2 776 250 207 207 0 chr13 25085881 25085968 -95198344 - PB1D7 SINE Alu -13 107 3 2 776 213 307 51 39 chr13 25086039 25086117 -95198195 + MIR SINE MIR 128 206 -56 2 776 299 232 29 14 chr13 25086273 25086343 -95197969 + MTEb LTR MaLR 12 82 -297 2 776 744 238 23 6 chr13 25086347 25086520 -95197792 + MTEb LTR MaLR 204 379 0 2 776 549 236 68 0 chr13 25086880 25087028 -95197284 + MTE2b LTR MaLR 96 253 -126 2 776 998 194 55 45 chr13 25087692 25087892 -95196420 + B3 SINE B2 1 202 -14 2 776 490 243 18 0 chr13 25089355 25089466 -95194846 - PB1D7 SINE Alu -7 113 1 2 776 450 183 79 55 chr13 25089486 25089605 -95194707 - B3A SINE B2 -1 197 76 2 776 332 250 0 0 chr13 25089605 25089665 -95194647 + RSINE1 SINE B4 2 61 -104 2 776 321 241 0 0 chr13 25089752 25089806 -95194506 + ID4_ SINE ID 30 83 0 2 776 344 261 0 5 chr13 25089864 25089945 -95194367 + B3A SINE B2 8 85 -131 2 776 211 204 0 0 chr13 25090091 25090140 -95194172 + (CCCCAG)n Simple_repeat Simple_repeat 3 51 0 2 776 231 279 163 0 chr13 25090486 25090572 -95193740 + B1F SINE Alu 27 126 -23 2 776 712 239 52 16 chr13 25091209 25091400 -95192912 + B3A SINE B2 1 198 0 2 776 312 263 30 0 chr13 25092623 25092722 -95191590 + PB1D7 SINE Alu 1 102 -18 2 776 2765 139 65 14 chr13 25092932 25093427 -95190885 + RLTR28 LTR ERVL 1 520 -4 2 776 25 0 0 0 chr13 25093827 25093852 -95190460 + AT_rich Low_complexity Low_complexity 1 25 0 2 776 216 269 111 61 chr13 25094000 25094026 -95190286 + PB1D9 SINE Alu 14 115 -3 2 776 368 183 28 0 chr13 25094026 25094097 -95190215 + ID_B1 SINE B4 147 219 -5 2 776 766 239 85 0 chr13 25094471 25094659 -95189653 - B3 SINE B2 -5 211 8 2 776 956 216 72 5 chr13 25094944 25095139 -95189173 + B3 SINE B2 9 216 0 2 776 399 82 27 14 chr13 25095344 25095418 -95188894 + (TCTA)n Simple_repeat Simple_repeat 3 77 0 2 776 189 0 0 0 chr13 25095418 25095439 -95188873 + (TCCC)n Simple_repeat Simple_repeat 2 22 0 2 776 2533 40 3 0 chr13 25095551 25095853 -95188459 - L1_Mus1 LINE L1 0 6567 6265 2 776 462 270 19 57 chr13 25096247 25096410 -95187902 + ID_B1 SINE B4 86 244 -48 2 776 765 146 69 0 chr13 25096608 25096738 -95187574 - B1_Mur3 SINE Alu -10 139 1 2 776 272 284 327 0 chr13 25097201 25097363 -95186949 - ID_B1 SINE B4 -6 218 4 2 776 756 286 43 11 chr13 25097405 25097589 -95186723 - B3 SINE B2 -26 190 1 2 776 204 97 0 0 chr13 25097968 25097999 -95186313 + (TGGGGG)n Simple_repeat Simple_repeat 3 33 0 2 776 1133 68 7 7 chr13 25098428 25098576 -95185736 - B1_Mus1 SINE Alu 0 148 1 2 776 346 297 79 7 chr13 25098633 25098772 -95185540 - LTR87 LTR ERVL? -26 598 450 2 776 349 286 50 66 chr13 25099396 25099594 -95184718 + RLTR46 LTR ERVK 126 320 0 2 776 291 240 13 13 chr13 25099872 25099948 -95184364 + IAPLTR3-int LTR ERVK 371 446 -6375 2 776 37988 181 28 18 chr13 25099933 25103693 -95180619 + IAPEY3-int LTR ERVK 246 4109 -3571 2 776 190 200 62 124 chr13 25103693 25103790 -95180522 + L3 LINE CR1 3939 4029 -460 2 776 37988 181 28 18 chr13 25103790 25107262 -95177050 + IAPEY3-int LTR ERVK 4110 7680 0 2 776 349 286 50 66 chr13 25107390 25107588 -95176724 + RLTR46 LTR ERVK 126 320 0 2 776 875 142 28 14 chr13 25107743 25107886 -95176426 - B1_Mur3 SINE Alu 0 149 5 2 776 28 0 0 0 chr13 25108268 25108296 -95176016 + AT_rich Low_complexity Low_complexity 1 28 0 2 776 240 208 75 0 chr13 25108381 25108434 -95175878 - B1F1 SINE Alu -54 95 39 2 776 281 307 78 28 chr13 25108523 25108664 -95175648 + B1F SINE Alu 1 148 -1 2 776 289 245 25 131 chr13 25108761 25108785 -95175527 + MT2B LTR ERVL 143 248 -350 2 776 443 232 32 0 chr13 25108785 25108880 -95175432 + B1_Mur4 SINE Alu 1 98 -52 2 776 405 259 26 53 chr13 25108932 25109046 -95175266 + PB1D9 SINE Alu 1 111 -9 2 776 549 294 77 11 chr13 25109181 25109363 -95174949 - B3A SINE B2 -4 194 1 2 776 234 299 137 36 chr13 25109421 25109560 -95174752 - MIR SINE MIR -74 188 36 2 776 625 286 26 112 chr13 25109831 25110063 -95174249 + ID_B1 SINE B4 1 212 -12 2 776 263 275 0 0 chr13 25110698 25110765 -95173547 + ID4_ SINE ID 28 94 -58 2 776 226 268 0 0 chr13 25110808 25110849 -95173463 - RSINE1 SINE B4 -59 106 66 2 776 300 191 29 29 chr13 25111354 25111424 -95172888 + B1F SINE Alu 80 149 0 2 776 231 191 0 0 chr13 25111597 25111639 -95172673 + RSINE1 SINE B4 91 132 -33 2 776 297 290 30 0 chr13 25111707 25111807 -95172505 + PB1D7 SINE Alu 11 113 -7 2 776 195 42 0 0 chr13 25113180 25113204 -95171108 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 776 1128 36 0 7 chr13 25113204 25113342 -95170970 - B1_Mus2 SINE Alu -10 137 1 2 776 300 158 0 0 chr13 25113601 25113677 -95170635 + (CAAA)n Simple_repeat Simple_repeat 2 77 0 2 776 282 298 25 66 chr13 25113728 25113850 -95170462 + PB1D10 SINE Alu 1 117 0 2 776 240 192 48 71 chr13 25115069 25115153 -95169159 - MLT1A LTR MaLR -56 318 237 2 776 305 198 54 11 chr13 25115174 25115266 -95169046 + Lx6 LINE L1 7362 7457 -3 2 776 822 296 0 19 chr13 25115656 25115914 -95168398 - L1MA4 LINE L1 -362 5938 5686 2 776 274 184 147 113 chr13 25116027 25116192 -95168120 - B3 SINE B2 -18 177 1 2 776 295 102 383 0 chr13 25116221 25116328 -95167984 - B2_Mm2 SINE B2 -1 194 47 2 776 1231 114 11 0 chr13 25116404 25116580 -95167732 - B2_Mm1t SINE B2 -14 179 2 2 776 28 0 0 0 chr13 25116752 25116780 -95167532 + AT_rich Low_complexity Low_complexity 1 28 0 2 776 301 243 0 23 chr13 25116975 25117078 -95167234 - RSINE1 SINE B4 -169 123 24 2 776 744 274 10 38 chr13 25117170 25117379 -95166933 - ID_B1 SINE B4 -13 211 9 2 776 349 278 36 36 chr13 25117523 25117661 -95166651 + L1MA5 LINE L1 6155 6292 -8 2 776 401 213 13 0 chr13 25117701 25117776 -95166536 + ID4_ SINE ID 2 77 -6 2 776 741 206 97 11 chr13 25118983 25119169 -95165143 - B3 SINE B2 -10 206 5 2 776 635 259 0 34 chr13 25119179 25119191 -95165121 - ID_B1 SINE B4 -2 222 214 2 776 243 0 0 0 chr13 25119191 25119218 -95165094 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 776 635 259 0 34 chr13 25119218 25119353 -95164959 - ID_B1 SINE B4 -11 213 80 2 776 427 245 214 3 chr13 25119414 25119605 -95164707 - MTD LTR MaLR -3 416 181 2 776 512 213 0 8 chr13 25119605 25119728 -95164584 + CT-rich Low_complexity Low_complexity 1 122 0 2 776 267 224 71 0 chr13 25119728 25119813 -95164499 - L1M3 LINE L1 -3305 2835 2745 2 776 25 90 0 0 chr13 25119924 25119991 -95164321 + AT_rich Low_complexity Low_complexity 1 67 0 2 776 963 215 26 0 chr13 25120226 25120421 -95163891 - MTD LTR MaLR -217 202 3 2 776 4269 97 5 67 chr13 25120706 25121493 -95162819 + RMER17A LTR ERVK 3 740 -11 2 776 39823 53 6 7 chr13 25121572 25128062 -95156250 - L1Md_T LINE L1 0 6582 99 2 776 526 242 45 0 chr13 25128613 25128745 -95155567 + ID_B1 SINE B4 86 223 -1 2 776 378 0 0 0 chr13 25128748 25128790 -95155522 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 2 776 357 145 0 0 chr13 25129729 25129791 -95154521 + (TATG)n Simple_repeat Simple_repeat 4 65 0 2 776 407 306 138 7 chr13 25129798 25129936 -95154376 - B4A SINE B4 -4 288 133 2 776 1334 84 0 45 chr13 25129993 25130047 -95154265 - B2_Mm2 SINE B2 -4 191 146 2 776 285 29 0 0 chr13 25130047 25130081 -95154231 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 776 1334 84 0 45 chr13 25130081 25130226 -95154086 - B2_Mm2 SINE B2 -50 145 1 2 776 482 176 17 85 chr13 25130780 25130898 -95153414 + B1_Mur1 SINE Alu 9 118 -2 2 776 217 281 15 15 chr13 25130997 25131062 -95153250 + CT-rich Low_complexity Low_complexity 1 65 0 2 776 384 276 158 5 chr13 25132350 25132572 -95151740 - L1M5 LINE L1 -2168 3978 3723 2 776 36431 64 7 14 chr13 25132603 25138705 -95145607 - L1Md_F2 LINE L1 -11 6571 510 2 776 472 294 0 0 chr13 25139012 25139131 -95145181 - PB1D7 SINE Alu 0 120 2 2 776 26 0 0 0 chr13 25139252 25139278 -95145034 + AT_rich Low_complexity Low_complexity 1 26 0 2 776 415 282 67 22 chr13 25139283 25139417 -95144895 + RSINE1 SINE B4 12 151 -14 2 776 333 275 77 123 chr13 25139477 25139647 -95144665 - RSINE1 SINE B4 0 165 4 2 776 557 266 42 0 chr13 25140266 25140409 -95143903 + B1F SINE Alu 1 149 0 2 776 205 211 0 0 chr13 25140423 25140461 -95143851 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2 776 614 197 114 62 chr13 25140985 25141196 -95143116 - ID_B1 SINE B4 -1 223 2 2 776 718 180 126 80 chr13 25141205 25141404 -95142908 - B3 SINE B2 -8 208 1 3 776 797 182 115 0 chr13 25141404 25141569 -95142743 + B3 SINE B2 27 210 -6 3 776 566 212 18 0 chr13 25142026 25142139 -95142173 + B3A SINE B2 1 115 -83 3 776 261 0 0 0 chr13 25142279 25142308 -95142004 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 776 600 123 0 82 chr13 25142322 25142517 -95141795 + (TG)n Simple_repeat Simple_repeat 1 179 0 3 776 198 0 0 0 chr13 25142704 25142726 -95141586 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 3 776 228 284 60 7 chr13 25142911 25143006 -95141306 - L2a LINE L2 0 3387 3287 3 776 237 213 33 0 chr13 25143401 25143462 -95140850 - PB1D9 SINE Alu -42 78 16 3 776 195 42 0 0 chr13 25143511 25143535 -95140777 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 3 776 327 109 0 35 chr13 25143560 25143617 -95140695 - B2_Mm2 SINE B2 -94 101 47 3 776 1195 79 79 0 chr13 25143654 25143819 -95140493 - B2_Mm1t SINE B2 -14 179 2 3 776 404 104 15 0 chr13 25144087 25144154 -95140158 + (AGGGGG)n Simple_repeat Simple_repeat 4 71 0 3 776 1593 159 67 67 chr13 25144292 25144360 -95139952 - ORR1B2 LTR MaLR -8 359 300 3 776 991 74 59 0 chr13 25144360 25144495 -95139817 - B1_Mus2 SINE Alu 0 147 5 3 776 1593 159 67 67 chr13 25144495 25144783 -95139529 - ORR1B2 LTR MaLR -68 299 3 3 776 255 240 163 87 chr13 25144829 25145025 -95139287 - MTEb LTR MaLR -14 365 155 3 776 792 258 43 11 chr13 25145462 25145650 -95138662 + ID_B1 SINE B4 10 203 -21 3 776 567 0 0 0 chr13 25145651 25145714 -95138598 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 776 219 290 29 0 chr13 25145895 25145964 -95138348 + MIRb SINE MIR 163 233 -35 3 776 571 249 152 78 chr13 25146056 25146378 -95137934 - ORR1E LTR MaLR -5 354 9 3 776 22 0 0 0 chr13 25146537 25146559 -95137753 + AT_rich Low_complexity Low_complexity 1 22 0 3 776 344 237 21 21 chr13 25146662 25146757 -95137555 - B1_Mur4 SINE Alu -47 103 9 3 776 191 284 0 75 chr13 25146773 25146853 -95137459 + L4 LINE RTE 210 283 -1746 3 776 394 266 0 68 chr13 25147455 25147572 -95136740 - B1F SINE Alu -37 112 4 3 776 423 212 127 0 chr13 25148606 25148724 -95135588 - B1F1 SINE Alu 0 149 17 3 776 384 296 141 27 chr13 25149205 25149513 -95134799 - L1MB8 LINE L1 -87 6097 5740 3 776 24 32 0 0 chr13 25149621 25149652 -95134660 + AT_rich Low_complexity Low_complexity 1 31 0 3 776 360 257 30 0 chr13 25149974 25150075 -95134237 - ID_B1 SINE B4 -2 222 119 3 776 287 319 76 0 chr13 25150075 25150093 -95134219 - B1F SINE Alu -2 147 20 3 776 570 239 159 0 chr13 25150179 25150342 -95133970 + ID_B1 SINE B4 6 194 -30 3 776 515 272 29 0 chr13 25150546 25150682 -95133630 + ID_B1 SINE B4 82 221 -3 3 776 25 31 0 0 chr13 25150720 25150752 -95133560 + AT_rich Low_complexity Low_complexity 1 32 0 3 776 279 310 33 60 chr13 25151414 25151565 -95132747 + RSINE1 SINE B4 2 148 -17 3 776 360 0 0 0 chr13 25151580 25151620 -95132692 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 776 538 254 62 0 chr13 25151928 25152058 -95132254 - RSINE1 SINE B4 -1 164 27 3 776 27 62 0 0 chr13 25152148 25152196 -95132116 + AT_rich Low_complexity Low_complexity 1 48 0 3 776 658 249 80 11 chr13 25152577 25152764 -95131548 + ID_B1 SINE B4 20 219 -5 3 776 210 169 38 25 chr13 25152779 25152858 -95131454 + GA-rich Low_complexity Low_complexity 6 85 0 3 776 806 242 0 0 chr13 25153614 25153763 -95130549 - B1_Mur2 SINE Alu 0 149 1 3 776 7193 70 7 5 chr13 25153785 25154731 -95129581 - L1Md_F2 LINE L1 0 6582 5667 3 776 276 306 0 0 chr13 25154735 25154797 -95129515 - tRNA-Ala-GCY_ tRNA tRNA -12 63 2 3 776 186 71 0 0 chr13 25155176 25155204 -95129108 + (TAA)n Simple_repeat Simple_repeat 2 29 0 3 776 369 0 0 0 chr13 25155551 25155592 -95128720 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 776 726 243 29 23 chr13 25155592 25155754 -95128558 - B3 SINE B2 -52 164 2 3 776 2134 159 4 82 chr13 25155812 25156029 -95128283 + MTC LTR MaLR 1 211 -210 3 776 2968 35 0 20 chr13 25156029 25156382 -95127930 - ORR1A0 LTR MaLR 0 346 1 3 776 2134 159 4 82 chr13 25156382 25156616 -95127696 + MTC LTR MaLR 212 417 -4 3 776 345 279 109 99 chr13 25157013 25157307 -95127005 - ORR1E LTR MaLR -6 353 57 3 776 243 255 330 0 chr13 25158450 25158544 -95125768 - RSINE1 SINE B4 -38 127 3 3 776 645 117 106 30 chr13 25159526 25159547 -95124765 + MTA_Mm LTR MaLR 266 285 -122 3 776 3486 23 5 0 chr13 25159547 25159941 -95124371 - MTA_Mm LTR MaLR 0 396 1 3 776 7527 74 28 70 chr13 25159941 25161087 -95123225 - MTA_Mm-int LTR MaLR 0 1098 1 3 776 662 75 120 3 chr13 25161087 25161196 -95123116 + MTA_Mm LTR MaLR 286 406 -1 3 776 25 51 0 0 chr13 25161295 25161334 -95122978 + AT_rich Low_complexity Low_complexity 1 39 0 3 776 22 35 0 0 chr13 25162697 25162726 -95121586 + AT_rich Low_complexity Low_complexity 1 29 0 3 776 272 259 23 12 chr13 25162925 25163011 -95121301 - ORR1E LTR MaLR -1 378 292 3 776 702 290 57 14 chr13 25163079 25163289 -95121023 - ORR1E LTR MaLR -106 253 35 3 776 3517 203 58 10 chr13 25163379 25163946 -95120366 - Lx6 LINE L1 -2 7458 6872 3 776 516 16 0 0 chr13 25163946 25164007 -95120305 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 776 3517 203 58 10 chr13 25164007 25164125 -95120187 - Lx6 LINE L1 -589 6871 6740 3 776 2367 121 104 5 chr13 25164136 25164519 -95119793 + MTC LTR MaLR 1 421 0 3 776 565 248 70 0 chr13 25164616 25164745 -95119567 - B1_Mur1 SINE Alu -10 139 2 3 776 360 0 0 0 chr13 25164923 25164963 -95119349 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1 970 238 79 10 chr13 25165733 25166023 -95118289 + ORR1E LTR MaLR 49 379 0 3 777 210 261 11 54 chr13 25166205 25166298 -95118014 + CT-rich Low_complexity Low_complexity 3 91 0 3 777 800 191 0 20 chr13 25166502 25166652 -95117660 + B1_Mus1 SINE Alu 1 147 -1 3 777 541 191 0 17 chr13 25166652 25166833 -95117479 + (CAA)n Simple_repeat Simple_repeat 1 178 0 3 777 565 186 0 0 chr13 25166833 25166946 -95117366 + (CCA)n Simple_repeat Simple_repeat 1 113 0 3 777 248 288 54 126 chr13 25167112 25167279 -95117033 + L2a LINE L2 3219 3424 -2 3 777 865 247 116 12 chr13 25167457 25167699 -95116613 + MTD LTR MaLR 118 384 -35 3 777 359 269 110 15 chr13 25167741 25167837 -95116475 - MLT1G3 LTR MaLR -25 570 471 3 777 243 0 0 0 chr13 25167837 25167864 -95116448 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 777 1187 56 0 0 chr13 25167864 25168007 -95116305 - B1_Mus1 SINE Alu -3 145 3 3 777 359 330 107 37 chr13 25168007 25168110 -95116202 - MLT1G3 LTR MaLR -125 470 344 3 777 1393 182 38 117 chr13 25169665 25170143 -95114169 - RMER10A LTR ERVL -2 440 1 3 777 385 283 40 27 chr13 25170400 25170549 -95113763 + B4A SINE B4 2 152 -140 3 777 796 298 101 25 chr13 25170867 25171184 -95113128 - MTE2b LTR MaLR -3 376 36 3 777 222 257 26 35 chr13 25172422 25172535 -95111777 + A-rich Low_complexity Low_complexity 4 115 0 3 777 1548 229 22 58 chr13 25172613 25173030 -95111282 - Lx7 LINE L1 -449 7247 6846 3 777 360 0 0 0 chr13 25173055 25173095 -95111217 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 777 578 270 20 7 chr13 25173109 25173258 -95111054 + RSINE1 SINE B4 2 152 -13 3 777 374 292 70 81 chr13 25173356 25173542 -95110770 + L1M2 LINE L1 4673 4856 -1287 3 777 2667 256 65 101 chr13 25173661 25174792 -95109520 - Lx9 LINE L1 -15 7629 6540 3 777 597 272 109 11 chr13 25174784 25175025 -95109287 + L1M2 LINE L1 4791 5055 -1088 3 777 418 258 204 18 chr13 25175608 25175962 -95108350 - L1MC4a LINE L1 -85 7797 7413 3 777 634 292 77 62 chr13 25176062 25176398 -95107914 - MER67C LTR ERV1 -121 590 250 3 777 991 212 64 5 chr13 25176436 25176640 -95107672 + B3 SINE B2 1 216 0 3 777 246 62 0 0 chr13 25176674 25176706 -95107606 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 777 279 0 0 0 chr13 25176709 25176740 -95107572 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 777 605 275 7 7 chr13 25176805 25176955 -95107357 - RSINE1 SINE B4 -14 151 2 3 777 266 294 197 21 chr13 25176961 25177149 -95107163 - MER67C LTR ERV1 -468 243 23 3 777 417 292 93 17 chr13 25177267 25177504 -95106808 - L1MC4a LINE L1 -613 7269 7015 3 777 529 300 95 118 chr13 25177686 25178468 -95105844 - L1MC4a LINE L1 -847 7035 6272 3 777 754 247 93 55 chr13 25178479 25178580 -95105732 - ORR1E LTR MaLR -4 355 253 3 777 2067 154 80 199 chr13 25178580 25178995 -95105317 + RLTR31A_Mm LTR ERVK 1 311 -273 3 777 207 0 0 0 chr13 25178995 25179018 -95105294 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 777 2067 154 80 199 chr13 25179018 25179265 -95105047 + RLTR31A_Mm LTR ERVK 312 584 0 3 777 754 247 93 55 chr13 25179265 25179420 -95104892 - ORR1E LTR MaLR -107 252 89 3 777 862 240 38 24 chr13 25179696 25179909 -95104403 + B3 SINE B2 1 216 0 3 777 921 250 99 37 chr13 25180510 25180834 -95103478 - MTEa LTR MaLR -35 344 1 3 777 307 318 0 0 chr13 25180834 25180919 -95103393 + L2 LINE L2 2283 2367 -1052 3 777 1007 58 0 0 chr13 25181080 25181218 -95103094 + B1_Mus2 SINE Alu 10 147 0 3 777 198 0 0 0 chr13 25181218 25181240 -95103072 + (A)n Simple_repeat Simple_repeat 1 22 0 3 777 993 128 6 16 chr13 25181325 25181507 -95102805 + CT-rich Low_complexity Low_complexity 1 180 0 3 777 592 190 78 0 chr13 25181516 25181632 -95102680 - B1_Mur2 SINE Alu -19 130 6 3 777 595 232 106 0 chr13 25181652 25181794 -95102518 - RSINE1 SINE B4 -6 159 3 3 777 189 74 0 0 chr13 25182806 25182833 -95101479 + (TGG)n Simple_repeat Simple_repeat 3 29 0 3 777 324 0 0 0 chr13 25182836 25182872 -95101440 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 777 523 270 53 13 chr13 25183820 25183970 -95100342 - RSINE1 SINE B4 -7 158 3 3 777 324 70 0 0 chr13 25183974 25184017 -95100295 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 777 667 241 18 36 chr13 25184067 25184235 -95100077 - B4 SINE B4 -80 212 48 3 777 731 221 20 7 chr13 25185107 25185257 -95099055 + RSINE1 SINE B4 1 152 -13 3 777 351 65 0 0 chr13 25185471 25185517 -95098795 + (CAAG)n Simple_repeat Simple_repeat 2 47 0 3 777 515 302 30 0 chr13 25186724 25186893 -95097419 + B3A SINE B2 1 174 -24 3 777 327 25 0 0 chr13 25187300 25187340 -95096972 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 777 306 242 73 10 chr13 25187354 25187450 -95096862 - RSINE1 SINE B4 -61 104 3 4 777 235 264 57 0 chr13 25187487 25187593 -95096719 - L1MEg LINE L1 -5206 878 767 4 777 699 222 20 27 chr13 25188947 25189095 -95095217 - B1_Mur1 SINE Alu 0 149 3 4 777 552 99 56 14 chr13 25189734 25189877 -95094435 + (TCTA)n Simple_repeat Simple_repeat 1 149 0 4 777 410 53 18 0 chr13 25189953 25190010 -95094302 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 4 777 320 164 15 0 chr13 25190013 25190080 -95094232 + CT-rich Low_complexity Low_complexity 1 68 0 4 777 423 137 0 0 chr13 25190825 25190898 -95093414 + (GGGA)n Simple_repeat Simple_repeat 4 76 0 4 777 343 276 20 0 chr13 25190899 25190997 -95093315 + ID_B1 SINE B4 122 221 -3 4 777 203 242 30 10 chr13 25192746 25192846 -95091466 + CT-rich Low_complexity Low_complexity 2 103 0 4 777 262 221 60 83 chr13 25192892 25192976 -95091336 - PB1D10 SINE Alu -15 102 21 4 777 1116 23 0 0 chr13 25193165 25193296 -95091016 + (TTC)n Simple_repeat Simple_repeat 2 132 0 4 777 1641 186 98 16 chr13 25193324 25193690 -95090622 + MTD LTR MaLR 10 405 -14 4 777 370 219 81 54 chr13 25193817 25193928 -95090384 - Lx5 LINE L1 -464 6586 6473 4 777 525 221 49 49 chr13 25195062 25195224 -95089088 - RSINE1 SINE B4 0 165 4 4 777 533 100 0 11 chr13 25195449 25195540 -95088772 + (CA)n Simple_repeat Simple_repeat 1 90 0 4 777 217 219 14 14 chr13 25195825 25195899 -95088413 + CT-rich Low_complexity Low_complexity 3 76 0 4 777 224 212 29 29 chr13 25195900 25195968 -95088344 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 777 409 282 70 6 chr13 25196126 25196283 -95088029 + B4A SINE B4 105 271 -21 4 777 182 366 92 5 chr13 25196412 25196607 -95087705 - MIR SINE MIR -44 218 7 4 777 246 308 122 0 chr13 25197161 25197268 -95087044 - PB1D7 SINE Alu 0 120 1 4 777 338 293 92 7 chr13 25197760 25197901 -95086411 + MER20 DNA MER1_type 1 153 -66 4 777 407 241 25 82 chr13 25198343 25198356 -95085956 - ID_B1 SINE B4 0 224 110 4 777 510 181 83 37 chr13 25198356 25198465 -95085847 - B1F1 SINE Alu -7 142 29 4 777 264 238 12 48 chr13 25198392 25198476 -95085836 - MT2B LTR ERVL -344 257 177 4 777 323 282 119 22 chr13 25199046 25199180 -95085132 + RSINE1 SINE B4 2 148 -17 4 777 272 247 165 0 chr13 25199781 25199866 -95084446 + ID_B1 SINE B4 92 190 -34 4 777 381 22 0 0 chr13 25200160 25200206 -95084106 + (TATG)n Simple_repeat Simple_repeat 2 47 0 4 777 382 274 9 0 chr13 25200209 25200315 -95083997 - ID_B1 SINE B4 -15 209 103 4 777 324 0 0 0 chr13 25200433 25200469 -95083843 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 777 678 316 69 15 chr13 25200479 25200739 -95083573 - B4A SINE B4 -15 277 4 4 777 248 296 68 48 chr13 25201500 25201603 -95082709 - PB1D10 SINE Alu -8 109 5 4 777 190 98 0 68 chr13 25203467 25203511 -95080801 + CT-rich Low_complexity Low_complexity 2 42 0 4 777 216 0 0 0 chr13 25203593 25203617 -95080695 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 4 777 698 284 0 62 chr13 25204535 25204745 -95079567 - B3A SINE B2 0 198 2 4 777 21 0 0 0 chr13 25205443 25205464 -95078848 + AT_rich Low_complexity Low_complexity 1 21 0 4 777 244 353 0 13 chr13 25205547 25205702 -95078610 + (CCCA)n Simple_repeat Simple_repeat 3 155 0 4 777 467 107 13 0 chr13 25205949 25206024 -95078288 + (TCCA)n Simple_repeat Simple_repeat 3 78 0 4 777 199 254 33 17 chr13 25206470 25206530 -95077782 - L2 LINE L2 -556 2863 2803 4 777 912 120 74 51 chr13 25206530 25206706 -95077606 - B2_Mm2 SINE B2 -14 181 2 4 777 282 29 0 0 chr13 25206750 25206785 -95077527 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 777 848 178 13 0 chr13 25206798 25206950 -95077362 - B3A SINE B2 -43 155 2 4 777 213 269 0 29 chr13 25207750 25207819 -95076493 + G-rich Low_complexity Low_complexity 4 70 0 4 777 346 226 32 11 chr13 25208421 25208515 -95075797 + B4A SINE B4 126 221 -71 4 777 411 132 0 0 chr13 25208517 25208585 -95075727 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 777 348 24 0 0 chr13 25208648 25208689 -95075623 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 777 498 128 0 0 chr13 25208689 25208783 -95075529 + (GA)n Simple_repeat Simple_repeat 1 94 0 4 777 1038 206 107 138 chr13 25208949 25209238 -95075074 + RLTR40 LTR ERVK 229 491 -326 4 777 1148 81 0 0 chr13 25209238 25209386 -95074926 + B1_Mus1 SINE Alu 1 148 0 4 777 1038 206 107 138 chr13 25209386 25209619 -95074693 + RLTR40 LTR ERVK 492 735 -82 4 777 435 63 0 0 chr13 25210457 25210520 -95073792 + (TATG)n Simple_repeat Simple_repeat 2 64 0 4 777 259 215 15 15 chr13 25210863 25210929 -95073383 - ID4_ SINE ID -16 67 2 4 777 289 274 9 97 chr13 25211428 25211541 -95072771 - B3A SINE B2 -95 103 1 4 777 280 178 0 0 chr13 25211946 25211991 -95072321 + ID_B1 SINE B4 89 133 -91 4 777 253 232 305 0 chr13 25211991 25212021 -95072291 + PB1D10 SINE Alu 18 107 -42 4 777 324 0 0 0 chr13 25212033 25212069 -95072243 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 777 270 250 0 0 chr13 25212567 25212635 -95071677 + PB1D10 SINE Alu 42 109 -8 4 777 369 213 13 13 chr13 25212644 25212720 -95071592 + ID4_ SINE ID 2 77 -6 4 777 595 222 17 0 chr13 25213164 25213281 -95071031 - B1F SINE Alu -3 146 28 4 777 243 302 0 0 chr13 25216127 25216190 -95068122 - tRNA-Ala-GCA tRNA tRNA -11 64 2 4 777 491 208 8 0 chr13 25216341 25216466 -95067846 + CT-rich Low_complexity Low_complexity 4 129 0 4 777 669 291 17 23 chr13 25216473 25216649 -95067663 - B3 SINE B2 -28 188 14 4 777 216 158 0 0 chr13 25216719 25216757 -95067555 + GA-rich Low_complexity Low_complexity 2 39 0 4 777 964 205 52 111 chr13 25216777 25217158 -95067154 - MT2A LTR ERVL -61 523 1 4 777 674 260 98 5 chr13 25217158 25217381 -95066931 - MTEa LTR MaLR -135 244 1 4 777 2272 220 183 7 chr13 25217437 25218005 -95066307 - Lx6 LINE L1 0 7460 6793 4 777 1604 57 0 0 chr13 25218528 25218721 -95065591 + B2_Mm1t SINE B2 1 193 0 4 777 609 245 13 13 chr13 25219109 25219258 -95065054 - B1F SINE Alu 0 149 1 4 777 180 0 0 0 chr13 25219425 25219445 -95064867 + (C)n Simple_repeat Simple_repeat 1 20 0 4 777 185 148 48 32 chr13 25220583 25220646 -95063666 + (TATG)n Simple_repeat Simple_repeat 4 67 0 4 777 779 259 62 62 chr13 25220663 25220922 -95063390 - B4A SINE B4 0 292 34 4 777 364 287 59 0 chr13 25220995 25221131 -95063181 + CT-rich Low_complexity Low_complexity 4 147 0 4 777 376 186 0 0 chr13 25221132 25221202 -95063110 - PB1D10 SINE Alu -7 110 41 4 777 207 347 33 25 chr13 25221468 25221589 -95062723 - MIR SINE MIR -113 149 28 4 777 248 316 13 0 chr13 25221891 25221967 -95062345 + (CGTG)n Simple_repeat Simple_repeat 2 78 0 4 777 214 157 38 38 chr13 25222340 25222393 -95061919 + T-rich Low_complexity Low_complexity 2 54 0 4 777 252 191 0 35 chr13 25222975 25223062 -95061250 + (TG)n Simple_repeat Simple_repeat 1 84 0 4 777 236 322 67 0 chr13 25223565 25223655 -95060657 - HAL1 LINE L1 -2183 324 229 4 777 195 246 53 107 chr13 25224787 25224937 -95059375 - MIR SINE MIR -54 208 67 4 777 401 36 0 18 chr13 25225807 25225863 -95058449 + (CAAAC)n Simple_repeat Simple_repeat 2 56 0 4 777 396 297 0 41 chr13 25226085 25226208 -95058104 - MTEb LTR MaLR -22 357 240 4 777 242 293 49 0 chr13 25226231 25226313 -95057999 - MTEb LTR MaLR -230 129 44 4 777 380 151 100 44 chr13 25226889 25226979 -95057333 - B1F SINE Alu -7 142 48 4 777 365 240 0 7 chr13 25226979 25227134 -95057178 + CT-rich Low_complexity Low_complexity 3 156 0 4 777 700 207 136 11 chr13 25227473 25227649 -95056663 + B3A SINE B2 1 198 0 4 777 23 0 0 0 chr13 25227778 25227801 -95056511 + AT_rich Low_complexity Low_complexity 1 23 0 4 777 594 299 20 30 chr13 25227801 25228001 -95056311 - B3A SINE B2 0 198 1 4 777 438 245 93 19 chr13 25228337 25228499 -95055813 - MTEb LTR MaLR 0 379 206 4 777 283 295 51 0 chr13 25228628 25228706 -95055606 - MTEb LTR MaLR -259 100 19 4 777 1740 145 34 92 chr13 25230476 25230825 -95053487 + ORR1A4 LTR MaLR 1 329 0 4 777 369 312 93 78 chr13 25230980 25231314 -95052998 - L1M5 LINE L1 -538 5635 5297 4 777 665 225 14 120 chr13 25231328 25231545 -95052767 - B3A SINE B2 0 198 5 4 777 1218 48 7 0 chr13 25231628 25231775 -95052537 - B1_Mus1 SINE Alu 0 148 1 4 777 495 218 48 0 chr13 25231803 25231927 -95052385 + RSINE1 SINE B4 3 132 -33 4 777 21 95 0 0 chr13 25231964 25232027 -95052285 + AT_rich Low_complexity Low_complexity 1 63 0 4 777 219 69 0 0 chr13 25232521 25232550 -95051762 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 777 207 0 0 0 chr13 25234965 25234988 -95049324 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 4 777 387 348 24 12 chr13 25235751 25235917 -95048395 - MIRb SINE MIR 0 268 101 4 777 655 198 18 48 chr13 25236021 25236186 -95048126 + B3A SINE B2 1 160 -38 4 777 861 225 12 138 chr13 25237226 25237393 -95046919 - B3 SINE B2 0 216 80 4 777 2182 98 34 6 chr13 25237393 25237713 -95046599 - ORR1A4 LTR MaLR 0 329 1 4 777 861 225 12 138 chr13 25237713 25237792 -95046520 - B3 SINE B2 -137 79 1 4 777 646 180 9 0 chr13 25237825 25237936 -95046376 - PB1D9 SINE Alu -3 117 6 4 777 294 250 9 94 chr13 25237844 25237950 -95046362 - MT2B LTR ERVL -350 251 155 4 777 262 267 0 51 chr13 25237990 25238069 -95046243 - L1MA9 LINE L1 -378 5934 5860 4 777 535 182 233 22 chr13 25238192 25238372 -95045940 - ORR1D1 LTR MaLR 0 374 157 4 777 894 134 0 0 chr13 25238373 25238537 -95045775 + (GA)n Simple_repeat Simple_repeat 1 164 0 5 777 326 217 21 117 chr13 25239282 25239376 -95044936 - PB1D10 SINE Alu -6 111 27 5 777 195 69 0 0 chr13 25240180 25240209 -95044103 + (A)n Simple_repeat Simple_repeat 1 29 0 5 777 24 0 0 0 chr13 25240273 25240297 -95044015 + AT_rich Low_complexity Low_complexity 1 24 0 5 777 297 89 0 0 chr13 25240427 25240472 -95043840 + (CCAA)n Simple_repeat Simple_repeat 3 47 0 5 777 459 263 34 73 chr13 25240781 25240986 -95043326 - B3A SINE B2 0 198 2 5 777 3323 41 8 0 chr13 25241033 25241426 -95042886 + MTA_Mm LTR MaLR 1 396 0 5 777 270 0 0 0 chr13 25241594 25241624 -95042688 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 777 593 245 38 13 chr13 25241747 25241904 -95042408 - RSINE1 SINE B4 0 165 5 5 777 23 33 0 0 chr13 25241923 25241953 -95042359 + AT_rich Low_complexity Low_complexity 1 30 0 5 777 371 233 212 11 chr13 25241990 25242274 -95042038 - ORR1E LTR MaLR -7 372 1 5 777 334 269 13 0 chr13 25243286 25243364 -95040948 + ID4 SINE ID 2 80 -3 5 777 212 111 21 62 chr13 25243365 25243413 -95040899 + A-rich Low_complexity Low_complexity 5 50 0 5 777 1094 133 3 3 chr13 25243642 25243942 -95040370 + (CCAA)n Simple_repeat Simple_repeat 1 300 0 5 777 210 71 0 0 chr13 25244229 25244257 -95040055 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 5 777 212 200 123 0 chr13 25245519 25245584 -95038728 - L3 LINE CR1 -763 3726 3654 5 777 1507 153 55 112 chr13 25246601 25246968 -95037344 + ORR1B1 LTR MaLR 41 386 -8 5 777 296 203 14 28 chr13 25247284 25247355 -95036957 - B4 SINE B4 -208 84 15 5 777 431 231 8 0 chr13 25249364 25249498 -95034814 + (TG)n Simple_repeat Simple_repeat 2 136 0 5 777 350 254 20 119 chr13 25249509 25249710 -95034602 - B3A SINE B2 -16 182 2 5 777 237 261 15 0 chr13 25250247 25250312 -95034000 + L2b LINE L2 3308 3373 -2 5 777 418 198 12 0 chr13 25250566 25250652 -95033660 - PB1D10 SINE Alu -20 97 11 5 777 384 232 21 0 chr13 25250568 25250663 -95033649 - ID_B1 SINE B4 -48 176 80 5 777 390 42 0 0 chr13 25250663 25250711 -95033601 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 777 460 209 26 17 chr13 25250859 25250976 -95033336 + ORR1E LTR MaLR 4 121 -238 5 777 347 283 97 29 chr13 25251221 25251408 -95032904 + Tigger7 DNA MER2_type 3 217 -2274 5 777 302 304 178 61 chr13 25251569 25252014 -95032298 + MLT1D LTR MaLR 6 502 -3 5 777 180 0 0 0 chr13 25252874 25252894 -95031418 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 777 3397 44 2 12 chr13 25253803 25254214 -95030098 - MTB_Mm LTR MaLR 0 407 1 5 777 1260 131 350 0 chr13 25254260 25254546 -95029766 - ORR1B1 LTR MaLR -8 386 1 5 777 23 0 0 0 chr13 25255049 25255072 -95029240 + AT_rich Low_complexity Low_complexity 1 23 0 5 777 621 292 48 11 chr13 25255381 25255644 -95028668 - Lx7 LINE L1 -1571 5902 5629 5 777 237 65 0 0 chr13 25255656 25255687 -95028625 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 777 447 19 0 0 chr13 25255933 25255985 -95028327 + (TC)n Simple_repeat Simple_repeat 2 53 0 5 777 258 32 0 0 chr13 25255985 25256015 -95028297 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 777 803 287 15 30 chr13 25256505 25256767 -95027545 - MTEb LTR MaLR -1 378 121 5 777 913 82 0 63 chr13 25256750 25256893 -95027419 + B1_Mur3 SINE Alu 11 144 -5 5 777 813 250 12 0 chr13 25256976 25257148 -95027164 - MTEa LTR MaLR -200 179 6 5 777 1137 146 0 0 chr13 25257492 25257877 -95026435 + (TG)n Simple_repeat Simple_repeat 1 385 0 5 777 306 73 0 0 chr13 25258964 25259005 -95025307 + (TCCCC)n Simple_repeat Simple_repeat 5 45 0 5 777 1205 69 90 17 chr13 25260736 25260914 -95023398 - B2_Mm2 SINE B2 -4 191 1 5 777 739 142 86 8 chr13 25261368 25261496 -95022816 + B1_Mm SINE Alu 5 142 -5 5 777 207 0 0 0 chr13 25261503 25261526 -95022786 + (CAAG)n Simple_repeat Simple_repeat 1 23 0 5 777 306 308 130 17 chr13 25261675 25261913 -95022399 - RMER15 LTR ERVL -15 560 296 5 777 208 262 0 0 chr13 25262308 25262350 -95021962 + (TATATG)n Simple_repeat Simple_repeat 6 47 0 5 777 1061 71 50 0 chr13 25262473 25262613 -95021699 + B1_Mus2 SINE Alu 1 147 0 5 777 189 74 0 0 chr13 25262613 25262640 -95021672 + (A)n Simple_repeat Simple_repeat 1 27 0 5 777 420 231 119 8 chr13 25263551 25263669 -95020643 + MTEa LTR MaLR 1 131 -248 5 777 666 176 20 0 chr13 25263715 25263863 -95020449 + GA-rich Low_complexity Low_complexity 2 152 0 5 777 479 256 16 60 chr13 25263893 25264076 -95020236 + MTEa LTR MaLR 183 357 -22 5 777 522 0 0 0 chr13 25264544 25264602 -95019710 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 777 1754 300 116 26 chr13 25265124 25266244 -95018068 - Lx8 LINE L1 -22 7622 6227 5 777 504 0 0 0 chr13 25266270 25266326 -95017986 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 777 953 224 55 68 chr13 25266382 25266913 -95017399 - L1_Rod LINE L1 -135 5745 5260 5 777 560 172 57 16 chr13 25266909 25267033 -95017279 - L1_Rod LINE L1 -913 4934 4806 5 777 2316 210 117 16 chr13 25267135 25267825 -95016487 - L1_Mur3 LINE L1 -7035 677 1 5 777 387 0 0 0 chr13 25267825 25267868 -95016444 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 777 2012 206 142 14 chr13 25267868 25267949 -95016363 - L1_Mur3 LINE L1 -7551 161 52 5 777 2151 284 73 57 chr13 25267954 25268227 -95016085 - L1_Rod LINE L1 -2003 3844 3576 5 777 459 0 0 0 chr13 25268227 25268278 -95016034 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 777 2151 284 73 57 chr13 25268278 25269171 -95015141 - L1_Rod LINE L1 -2272 3575 2660 5 777 267 330 19 0 chr13 25269316 25269419 -95014893 + L2 LINE L2 2318 2422 -997 5 777 216 320 13 0 chr13 25269425 25269503 -95014809 - ID4 SINE ID -3 80 2 5 777 716 204 83 0 chr13 25269535 25269692 -95014620 - B3 SINE B2 -5 211 42 5 777 508 337 46 0 chr13 25269730 25269926 -95014386 + Tigger5 DNA MER2_type 2 206 -2200 5 777 240 298 48 0 chr13 25269943 25270027 -95014285 + Tigger5 DNA MER2_type 2296 2383 -23 5 777 189 107 0 0 chr13 25272165 25272193 -95012119 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 777 430 295 9 18 chr13 25273014 25273128 -95011184 + B4A SINE B4 12 124 -168 5 777 537 16 0 0 chr13 25273250 25273312 -95011000 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 777 260 275 66 16 chr13 25274148 25274270 -95010042 - MLT1D LTR MaLR -1 504 377 5 777 1381 78 0 11 chr13 25275132 25275313 -95008999 - B2_Mm2 SINE B2 -14 181 3 5 777 471 18 0 0 chr13 25275411 25275467 -95008845 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 777 633 213 7 47 chr13 25275468 25275616 -95008696 - B4A SINE B4 -22 270 129 5 777 324 200 0 0 chr13 25275640 25275720 -95008592 + C-rich Low_complexity Low_complexity 5 84 0 5 777 333 0 0 0 chr13 25275858 25275895 -95008417 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5 777 330 132 0 0 chr13 25276459 25276512 -95007800 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 777 240 200 18 0 chr13 25277900 25277955 -95006357 + L1M5 LINE L1 5823 5878 -246 5 777 263 288 15 0 chr13 25277994 25278060 -95006252 + GA-rich Low_complexity Low_complexity 3 69 0 5 777 369 0 0 0 chr13 25280235 25280276 -95004036 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 777 998 265 47 0 chr13 25280276 25280533 -95003779 - B4A SINE B4 -23 269 1 5 777 273 269 0 25 chr13 25282009 25282089 -95002223 + (CATATA)n Simple_repeat Simple_repeat 1 78 0 5 777 214 196 21 21 chr13 25282270 25282317 -95001995 + C-rich Low_complexity Low_complexity 5 51 0 5 777 262 271 0 0 chr13 25282882 25282941 -95001371 - ID4 SINE ID -20 63 5 5 777 438 313 96 22 chr13 25282944 25283307 -95001005 - HAL1 LINE L1 -850 1657 1268 5 777 530 278 89 38 chr13 25283741 25283954 -95000358 - B4A SINE B4 -68 224 1 5 777 311 257 151 68 chr13 25283959 25284105 -95000207 - HAL1 LINE L1 -1468 1039 882 5 777 207 0 0 0 chr13 25284119 25284142 -95000170 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 777 219 323 43 58 chr13 25288130 25288268 -94996044 + MIR SINE MIR 116 251 -11 5 777 501 17 0 0 chr13 25288811 25288869 -94995443 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 777 770 291 62 23 chr13 25288912 25289114 -94995198 - MLT1B LTR MaLR 0 390 179 5 777 477 0 0 0 chr13 25289114 25289167 -94995145 + (TTTC)n Simple_repeat Simple_repeat 2 54 0 5 777 1209 49 0 0 chr13 25289167 25289311 -94995001 - B1_Mus2 SINE Alu -2 145 2 5 777 770 291 62 23 chr13 25289311 25289413 -94994899 - MLT1B LTR MaLR -212 178 74 5 777 322 0 50 33 chr13 25289570 25289630 -94994682 + (TTTTTG)n Simple_repeat Simple_repeat 5 65 0 5 777 1114 95 0 7 chr13 25289630 25289778 -94994534 - B1_Mus2 SINE Alu 0 147 1 5 777 629 271 0 48 chr13 25290367 25290534 -94993778 - RSINE1 SINE B4 -4 161 3 5 777 815 242 29 49 chr13 25290658 25290862 -94993450 - ID_B1 SINE B4 -8 216 17 5 777 225 0 0 0 chr13 25291129 25291154 -94993158 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 777 25 0 0 0 chr13 25291737 25291762 -94992550 + AT_rich Low_complexity Low_complexity 1 25 0 5 777 441 235 100 23 chr13 25292626 25292879 -94991433 - L1M3 LINE L1 -1565 4581 4303 5 777 207 100 0 0 chr13 25292882 25292912 -94991400 + (TTA)n Simple_repeat Simple_repeat 1 30 0 5 777 238 274 0 0 chr13 25292952 25293003 -94991309 - B1F SINE Alu -98 51 1 5 777 213 200 0 141 chr13 25292961 25293025 -94991287 - ID_B1 SINE B4 -101 123 69 5 777 23 0 0 0 chr13 25294489 25294512 -94989800 + AT_rich Low_complexity Low_complexity 1 23 0 5 777 277 232 10 10 chr13 25294596 25294692 -94989620 + (CCCA)n Simple_repeat Simple_repeat 1 96 0 5 777 396 0 0 0 chr13 25295201 25295245 -94989067 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 5 777 909 149 17 0 chr13 25295245 25295420 -94988892 + CT-rich Low_complexity Low_complexity 3 180 0 5 777 1341 54 0 0 chr13 25295422 25295611 -94988701 - L1_Mus1 LINE L1 0 6567 6398 5 777 1017 256 125 17 chr13 25295713 25296130 -94988182 + L1MA8 LINE L1 5828 6289 -2 6 777 1244 110 22 0 chr13 25296168 25296350 -94987962 + B2_Mm1t SINE B2 1 186 -7 6 778 451 254 55 0 chr13 25296961 25297071 -94987241 - PB1D10 SINE Alu 0 117 2 6 778 192 234 0 0 chr13 25298312 25298359 -94985953 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 6 778 261 0 0 0 chr13 25298428 25298457 -94985855 + (TC)n Simple_repeat Simple_repeat 2 30 0 6 778 666 37 0 0 chr13 25298457 25298537 -94985775 + (TA)n Simple_repeat Simple_repeat 2 82 0 6 778 233 254 18 0 chr13 25300290 25300345 -94983967 + RSINE1 SINE B4 2 57 -108 6 778 476 59 15 0 chr13 25300379 25300447 -94983865 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 778 394 279 40 32 chr13 25300561 25300687 -94983625 + ID_B1 SINE B4 85 211 -13 6 778 180 0 0 0 chr13 25300689 25300709 -94983603 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 778 571 290 7 0 chr13 25301178 25301316 -94982996 + ID_B1 SINE B4 68 206 -18 6 778 459 0 0 0 chr13 25301320 25301371 -94982941 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 6 778 429 36 0 0 chr13 25303141 25303196 -94981116 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 778 387 60 0 0 chr13 25303251 25303301 -94981011 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 6 778 537 228 108 24 chr13 25303348 25303514 -94980798 - B3A SINE B2 -18 180 1 6 778 279 0 0 0 chr13 25303535 25303566 -94980746 + (CCA)n Simple_repeat Simple_repeat 1 31 0 6 778 427 346 22 0 chr13 25303570 25303706 -94980606 - B1F1 SINE Alu -9 140 2 6 778 220 344 31 62 chr13 25303787 25303917 -94980395 - RSINE1 SINE B4 -38 127 2 6 778 194 234 134 61 chr13 25304025 25304107 -94980205 + L2 LINE L2 2279 2366 -1053 6 778 483 207 35 18 chr13 25304221 25304334 -94979978 - ID_B1 SINE B4 -109 115 1 6 778 237 283 138 65 chr13 25304351 25304627 -94979685 - L1MEd LINE L1 -2964 3182 2887 6 778 354 316 62 71 chr13 25304776 25305001 -94979311 + LTR16A1 LTR ERVL 173 395 -61 6 778 261 312 26 0 chr13 25305326 25305403 -94978909 + B1F SINE Alu 1 79 -70 6 778 309 26 0 0 chr13 25305891 25305929 -94978383 + (TC)n Simple_repeat Simple_repeat 2 39 0 6 778 261 0 0 0 chr13 25305929 25305957 -94978355 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 778 274 271 146 0 chr13 25305957 25306053 -94978259 - RSINE1 SINE B4 -41 124 15 6 778 691 232 64 6 chr13 25306136 25306292 -94978020 + B3 SINE B2 1 165 -51 6 778 252 0 0 0 chr13 25306292 25306320 -94977992 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 778 801 257 33 52 chr13 25306883 25306914 -94977398 - B3 SINE B2 -3 213 191 6 778 2224 175 15 17 chr13 25306914 25307322 -94976990 + MTB_Mm LTR MaLR 1 407 0 6 778 801 257 33 52 chr13 25307322 25307503 -94976809 - B3 SINE B2 -26 190 5 6 778 184 183 31 62 chr13 25307583 25307647 -94976665 + L3 LINE CR1 2082 2143 -2346 6 778 290 292 16 24 chr13 25308097 25308220 -94976092 - L1MEd LINE L1 -5105 1031 910 6 778 668 297 132 38 chr13 25308280 25308675 -94975637 - MT2A LTR ERVL 0 533 102 6 778 288 293 12 0 chr13 25308721 25308803 -94975509 - MTE2b LTR MaLR -296 83 1 6 778 749 261 67 0 chr13 25309702 25309882 -94974430 + B3 SINE B2 2 193 -23 6 778 1726 155 68 9 chr13 25310327 25310653 -94973659 + ORR1B2 LTR MaLR 1 345 -22 6 778 285 29 0 0 chr13 25311194 25311228 -94973084 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 778 672 267 33 22 chr13 25311238 25311418 -94972894 + B3A SINE B2 2 183 -15 6 778 223 150 0 32 chr13 25311434 25311496 -94972816 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 778 227 280 73 83 chr13 25311806 25311915 -94972397 - MIR SINE MIR -81 181 74 6 778 21 57 0 0 chr13 25313069 25313104 -94971208 + AT_rich Low_complexity Low_complexity 1 35 0 6 778 3955 252 55 39 chr13 25313277 25314179 -94970133 - Lx7 LINE L1 -378 7318 6408 6 778 5660 87 37 6 chr13 25314179 25314997 -94969315 - Lx3_Mus LINE L1 -11 6998 6156 6 778 3955 252 55 39 chr13 25314997 25315176 -94969136 - Lx7 LINE L1 -1289 6407 6220 6 778 3342 201 56 3 chr13 25315198 25315912 -94968400 + L1_Mur3 LINE L1 5076 5827 -53 6 778 2576 123 101 7 chr13 25315948 25316372 -94967940 - RMER4A LTR ERVK -2 464 1 6 778 5002 155 33 13 chr13 25316374 25317159 -94967153 - MurERV4-int LTR ERVK -2 5258 4361 6 778 411 21 0 0 chr13 25317159 25317207 -94967105 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 778 5002 211 67 11 chr13 25317207 25317654 -94966658 - MurERV4-int LTR ERVK -1420 4360 3859 6 778 37734 29 2 7 chr13 25317655 25322853 -94961459 + L1Md_T LINE L1 423 5586 -297 6 778 8541 36 0 0 chr13 25322853 25323849 -94960463 + L1Md_T LINE L1 5587 6582 0 6 778 6910 142 12 14 chr13 25323889 25325014 -94959298 - MurERV4-int LTR ERVK -1308 3952 2831 6 778 224 59 29 0 chr13 25325014 25325048 -94959264 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 6 778 6341 87 13 1 chr13 25325054 25325908 -94958404 - Lx LINE L1 -19 6635 5772 6 778 4692 149 11 0 chr13 25325908 25326648 -94957664 + Lx LINE L1 5035 5782 -101 6 778 4178 140 65 37 chr13 25326648 25327405 -94956907 - MurERV4-int LTR ERVK -2440 2820 2043 6 778 473 0 18 0 chr13 25327415 25327472 -94956840 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 778 41960 5 0 1 chr13 25327485 25334067 -94950245 - L1Md_A LINE L1 0 6582 7 6 778 3970 151 14 73 chr13 25334068 25334809 -94949503 - MurERV4-int LTR ERVK -3236 2024 1328 6 778 5280 170 21 13 chr13 25334805 25335735 -94948577 - MurERV4-int LTR ERVK -4146 1114 177 6 778 1216 147 16 5 chr13 25335775 25335967 -94948345 - MurERV4-int LTR ERVK -5066 194 1 6 778 2061 135 111 26 chr13 25335973 25336398 -94947914 - RMER4A LTR ERVK -5 461 1 6 778 7786 107 6 18 chr13 25336738 25337898 -94946414 - Lx3C LINE L1 -4 6972 5827 6 778 997 112 7 7 chr13 25337898 25338050 -94946262 - L1_Mur2 LINE L1 -1130 4747 4596 6 778 625 312 38 38 chr13 25338403 25338719 -94945593 + MLT1A0 LTR MaLR 1 316 -49 6 778 30 0 0 0 chr13 25338777 25338807 -94945505 + AT_rich Low_complexity Low_complexity 1 30 0 6 778 722 251 20 101 chr13 25338821 25338978 -94945334 - B3A SINE B2 -15 183 35 6 778 642 222 14 14 chr13 25338978 25339124 -94945188 - B1_Mur1 SINE Alu -2 147 2 6 778 722 251 20 101 chr13 25339124 25339165 -94945147 - B3A SINE B2 -164 34 1 6 778 210 171 0 0 chr13 25340000 25340041 -94944271 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 6 778 333 208 0 0 chr13 25340748 25340825 -94943487 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 778 189 74 0 0 chr13 25341214 25341241 -94943071 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 778 533 269 0 22 chr13 25341332 25341469 -94942843 - ORR1E LTR MaLR -2 377 244 6 778 266 0 29 0 chr13 25341514 25341548 -94942764 + (CATA)n Simple_repeat Simple_repeat 2 36 0 6 778 535 335 36 42 chr13 25341600 25341753 -94942559 - MT2A LTR ERVL -152 381 227 6 778 585 42 0 0 chr13 25341753 25341825 -94942487 + (CAG)n Simple_repeat Simple_repeat 1 72 0 6 778 535 335 36 42 chr13 25341825 25341980 -94942332 - MT2A LTR ERVL -307 226 75 6 778 814 269 21 5 chr13 25342052 25342246 -94942066 - ORR1E LTR MaLR -145 214 18 6 778 216 226 167 0 chr13 25342281 25342365 -94941947 + MIR SINE MIR 111 208 -54 6 778 308 338 104 26 chr13 25345915 25346146 -94938166 + MER90 LTR ERV1 1 249 -365 6 778 309 312 101 11 chr13 25346222 25346400 -94937912 + MER90 LTR ERV1 382 575 0 6 778 284 217 170 132 chr13 25346682 25346841 -94937471 - MTEa LTR MaLR -14 365 201 6 778 2199 193 7 16 chr13 25346867 25347314 -94936998 + MT2A LTR ERVL 15 457 -76 6 778 294 29 0 0 chr13 25349359 25349394 -94934918 + (CAG)n Simple_repeat Simple_repeat 1 35 0 6 778 387 0 0 0 chr13 25351326 25351369 -94932943 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 778 255 169 14 27 chr13 25351369 25351442 -94932870 + GA-rich Low_complexity Low_complexity 1 72 0 6 778 680 103 0 53 chr13 25351573 25351686 -94932626 - B2_Mm2 SINE B2 -84 111 5 6 778 249 346 131 33 chr13 25352559 25352864 -94931448 + L2 LINE L2 2667 3001 -418 6 778 294 93 56 0 chr13 25353069 25353123 -94931189 + MTEb LTR MaLR 189 245 -134 6 778 695 272 5 15 chr13 25353560 25353758 -94930554 - ORR1E LTR MaLR -163 196 1 6 778 25 31 0 0 chr13 25355076 25355108 -94929204 + AT_rich Low_complexity Low_complexity 1 32 0 6 778 456 232 122 35 chr13 25355109 25355290 -94929022 - B3 SINE B2 -6 210 16 6 778 1013 288 102 9 chr13 25355693 25356036 -94928276 + MTE2b LTR MaLR 1 375 -4 6 778 21 0 0 0 chr13 25356604 25356625 -94927687 + AT_rich Low_complexity Low_complexity 1 21 0 6 778 243 299 51 10 chr13 25356640 25356738 -94927574 - MIR SINE MIR -101 167 66 6 778 597 279 83 16 chr13 25358289 25358482 -94925830 - ID_B1 SINE B4 -16 208 3 6 778 338 161 58 6 chr13 25359638 25359794 -94924518 + (TCTA)n Simple_repeat Simple_repeat 4 167 0 6 778 181 128 21 21 chr13 25360085 25360133 -94924179 + A-rich Low_complexity Low_complexity 5 52 0 6 778 363 44 0 0 chr13 25360620 25360665 -94923647 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 6 778 189 282 56 14 chr13 25360725 25360797 -94923515 + L3 LINE CR1 4099 4173 -316 6 778 279 0 0 0 chr13 25361526 25361557 -94922755 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 778 318 132 0 0 chr13 25361784 25361837 -94922475 + (CCG)n Simple_repeat Simple_repeat 2 54 0 6 778 211 204 167 0 chr13 25362123 25362177 -94922135 - ID4 SINE ID -14 69 7 6 778 386 239 16 66 chr13 25362199 25362320 -94921992 - PB1D10 SINE Alu -2 115 1 6 778 956 115 7 0 chr13 25362370 25362518 -94921794 + B1_Mur4 SINE Alu 1 149 -1 6 778 1326 67 0 0 chr13 25362607 25362819 -94921493 + (TCC)n Simple_repeat Simple_repeat 1 212 0 6 778 371 255 40 71 chr13 25363422 25363557 -94920755 + ORR1E LTR MaLR 3 141 -233 6 778 510 190 49 20 chr13 25363571 25363673 -94920639 - B1_Mur2 SINE Alu 0 149 45 6 778 1903 282 40 19 chr13 25363721 25364353 -94919959 - Lx8 LINE L1 -7 7466 6822 6 778 423 286 64 98 chr13 25364386 25364622 -94919690 + ORR1E LTR MaLR 130 357 -2 6 778 290 304 155 63 chr13 25365232 25365354 -94918958 + MIRb SINE MIR 42 176 -92 6 778 4691 50 0 14 chr13 25365354 25365938 -94918374 + L1Md_F2 LINE L1 6004 6579 -3 6 778 290 304 155 63 chr13 25365938 25366022 -94918290 + MIRb SINE MIR 177 267 -1 6 778 21 0 0 0 chr13 25367411 25367432 -94916880 + GC_rich Low_complexity Low_complexity 1 21 0 6 778 548 242 16 8 chr13 25367817 25367942 -94916370 - B1F SINE Alu -2 147 22 6 778 1305 272 35 8 chr13 25368231 25368598 -94915714 + MTEa LTR MaLR 3 379 0 6 778 518 351 35 5 chr13 25368598 25368801 -94915511 + MER45C DNA Tip100 73 281 -672 6 778 453 19 0 0 chr13 25369022 25369076 -94915236 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 778 13199 127 62 70 chr13 25369106 25371160 -94913152 - L1_Mus2 LINE L1 0 6566 4539 7 778 243 343 30 6 chr13 25371160 25371269 -94913043 + MamRep38 DNA hAT 1 118 -177 7 778 13199 127 62 70 chr13 25371269 25371287 -94913025 - L1_Mus2 LINE L1 0 4538 4520 7 778 1187 139 36 27 chr13 25371287 25371508 -94912804 - Lx2 LINE L1 0 6997 6775 7 778 13677 113 54 42 chr13 25371508 25371948 -94912364 - L1_Mus2 LINE L1 -1364 4519 4050 7 778 1115 114 6 6 chr13 25371948 25372125 -94912187 - ORR1B1 LTR MaLR 0 394 218 7 778 13677 113 54 42 chr13 25372125 25375341 -94908971 - L1_Mus2 LINE L1 -1364 4049 609 7 778 976 200 0 5 chr13 25375343 25375529 -94908783 - ORR1B1 LTR MaLR -163 231 47 7 778 697 310 9 0 chr13 25375669 25375882 -94908430 + B3 SINE B2 1 215 -1 7 778 212 271 138 41 chr13 25377815 25377938 -94906374 - MIRc SINE MIR -119 149 15 7 778 648 257 71 0 chr13 25378669 25378852 -94905460 + B3A SINE B2 1 196 -2 7 778 222 118 0 0 chr13 25378908 25378942 -94905370 + (TTCC)n Simple_repeat Simple_repeat 4 37 0 7 778 339 25 0 0 chr13 25378947 25378987 -94905325 + (TCTTG)n Simple_repeat Simple_repeat 3 42 0 7 778 186 43 0 0 chr13 25378988 25379011 -94905301 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 7 778 693 187 60 0 chr13 25379018 25379152 -94905160 - B1_Mur2 SINE Alu -7 142 1 7 778 378 0 0 0 chr13 25379162 25379204 -94905108 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 7 778 599 242 0 0 chr13 25379221 25379349 -94904963 - RSINE1 SINE B4 -35 130 3 7 778 186 103 0 0 chr13 25379969 25379998 -94904314 + (TA)n Simple_repeat Simple_repeat 2 30 0 7 778 872 235 39 19 chr13 25380157 25380365 -94903947 + B3 SINE B2 1 212 -4 7 778 1160 168 81 107 chr13 25381421 25381730 -94902582 + MT2A LTR ERVL 1 427 -174 7 778 387 0 0 0 chr13 25381730 25381773 -94902539 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 7 778 638 192 23 24 chr13 25381773 25381915 -94902397 + MT2A LTR ERVL 354 545 -56 7 778 369 0 0 0 chr13 25381927 25381968 -94902344 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 778 1344 104 0 25 chr13 25382494 25382692 -94901620 + B2_Mm2 SINE B2 2 194 -1 7 778 672 102 0 0 chr13 25382693 25382791 -94901521 + (GAAA)n Simple_repeat Simple_repeat 4 101 0 7 778 1321 229 87 12 chr13 25383028 25383351 -94900961 - ORR1D2 LTR MaLR 0 370 24 7 778 257 319 75 8 chr13 25383389 25383509 -94900803 - RMER15 LTR ERVL -5 570 443 7 778 3086 178 19 6 chr13 25384911 25385396 -94898916 + L1_Mur1 LINE L1 893 1384 -4493 7 778 1677 36 0 0 chr13 25385396 25385589 -94898723 + B2_Mm1t SINE B2 1 193 0 7 778 3086 160 12 15 chr13 25385589 25386000 -94898312 + L1_Mur1 LINE L1 1385 1795 -4082 7 778 7053 125 18 45 chr13 25385993 25387201 -94897111 + L1_Mur1 LINE L1 4263 5437 -440 7 778 22 35 0 0 chr13 25387240 25387269 -94897043 + AT_rich Low_complexity Low_complexity 1 29 0 7 778 270 382 0 0 chr13 25388650 25388739 -94895573 + MTE2b LTR MaLR 265 353 -26 7 778 217 152 0 0 chr13 25388832 25388865 -94895447 + B3A SINE B2 1 33 -165 7 778 24 0 0 0 chr13 25388865 25388889 -94895423 + AT_rich Low_complexity Low_complexity 1 24 0 7 778 821 288 40 44 chr13 25389868 25390166 -94894146 - MTEb LTR MaLR -7 372 76 7 778 384 306 0 12 chr13 25391536 25391622 -94892690 - 5S rRNA rRNA -30 91 7 7 778 351 376 30 9 chr13 25391714 25391945 -94892367 - L1ME2 LINE L1 -272 5892 5657 7 778 681 229 131 53 chr13 25392179 25392461 -94891851 - Lx7 LINE L1 -3 7693 7390 7 778 1024 156 33 0 chr13 25392455 25392635 -94891677 - L1_Mur3 LINE L1 -659 5221 5036 7 778 9929 178 64 92 chr13 25392646 25393598 -94890714 - L1_Mur3 LINE L1 -1515 4365 3371 7 778 549 0 0 0 chr13 25393598 25393659 -94890653 + (TA)n Simple_repeat Simple_repeat 1 61 0 7 778 9929 178 64 92 chr13 25393659 25394225 -94890087 - L1_Mur3 LINE L1 -2510 3370 2811 7 778 1473 39 0 0 chr13 25394225 25394405 -94889907 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 778 9929 178 64 92 chr13 25394405 25394494 -94889818 - L1_Mur3 LINE L1 -3070 2810 2803 7 778 573 88 0 81 chr13 25394494 25394593 -94889719 - L1_Mus1 LINE L1 0 6567 6477 7 778 760 76 223 25 chr13 25394593 25394707 -94889605 + B1_Mus2 SINE Alu 3 141 -6 7 778 402 21 0 0 chr13 25394707 25394754 -94889558 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 7 778 9929 178 64 92 chr13 25394760 25395387 -94888925 - L1_Mur3 LINE L1 -3078 2802 2222 7 778 618 244 31 0 chr13 25395387 25395514 -94888798 - B1_Mur4 SINE Alu -19 131 1 7 778 9929 178 64 92 chr13 25395514 25395718 -94888594 - L1_Mur3 LINE L1 -3659 2221 2014 7 778 290 26 26 0 chr13 25395718 25395757 -94888555 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 778 9929 178 64 92 chr13 25395757 25396090 -94888222 - L1_Mur3 LINE L1 -3867 2013 1668 7 778 450 0 0 0 chr13 25396170 25396220 -94888092 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 7 778 261 200 40 67 chr13 25396625 25396700 -94887612 - MER2 DNA MER2_type -198 147 75 7 778 2793 208 75 21 chr13 25396751 25397551 -94886761 - L1_Mur3 LINE L1 -4365 1515 665 7 778 540 0 0 0 chr13 25397551 25397611 -94886701 + (GA)n Simple_repeat Simple_repeat 1 60 0 7 778 2793 233 78 32 chr13 25397611 25397813 -94886499 - L1_Mur3 LINE L1 -7064 664 464 7 778 279 0 0 0 chr13 25398841 25398872 -94885440 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 778 228 339 68 45 chr13 25399172 25399305 -94885007 - L2c LINE L2 -230 3157 3022 7 778 7132 85 13 8 chr13 25399380 25401220 -94883092 + L1VL2 LINE L1 82 1930 -1685 7 778 727 118 47 8 chr13 25401221 25401349 -94882963 + L1VL2 LINE L1 2880 3012 -603 7 778 408 217 0 0 chr13 25401397 25401489 -94882823 + (TATATG)n Simple_repeat Simple_repeat 5 96 0 7 778 563 157 9 0 chr13 25401488 25401596 -94882716 + GA-rich Low_complexity Low_complexity 2 110 0 7 778 653 255 129 31 chr13 25401725 25401919 -94882393 + ID_B1 SINE B4 5 217 -7 7 778 231 114 0 0 chr13 25402261 25402296 -94882016 + (T)n Simple_repeat Simple_repeat 1 35 0 7 778 859 280 18 23 chr13 25402766 25402985 -94881327 + MTD LTR MaLR 1 218 -201 7 778 468 0 0 0 chr13 25403566 25403618 -94880694 + (GA)n Simple_repeat Simple_repeat 1 52 0 7 778 316 257 110 100 chr13 25404113 25404264 -94880048 + MER63A DNA AcHobo 10 140 -70 7 778 387 0 0 0 chr13 25404264 25404307 -94880005 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 778 311 225 86 133 chr13 25404307 25404349 -94879963 + MER63D DNA AcHobo 401 433 -628 7 778 372 299 103 103 chr13 25404588 25404984 -94879328 - RMER10A LTR ERVL -27 415 20 7 778 858 290 79 41 chr13 25405896 25406238 -94878074 + ORR1E LTR MaLR 1 355 -4 7 778 307 320 60 45 chr13 25406268 25406402 -94877910 + MIRb SINE MIR 99 234 -34 7 778 632 263 19 32 chr13 25406824 25406981 -94877331 - B3A SINE B2 -1 197 43 7 778 2612 72 81 22 chr13 25407325 25407441 -94876871 + Lx LINE L1 6264 6379 -275 7 778 2939 30 0 172 chr13 25407441 25407882 -94876430 + RLTR10B2 LTR ERVK 1 365 0 7 778 2612 72 81 22 chr13 25407882 25408134 -94876178 + Lx LINE L1 6380 6654 0 7 778 987 98 6 12 chr13 25409177 25409342 -94874970 + (TTCCC)n Simple_repeat Simple_repeat 4 167 0 7 778 22 0 0 0 chr13 25409402 25409424 -94874888 + AT_rich Low_complexity Low_complexity 1 22 0 7 778 540 317 11 22 chr13 25409437 25409621 -94874691 - B3A SINE B2 -16 182 1 7 778 1567 236 22 15 chr13 25410410 25410784 -94873528 + MTD LTR MaLR 8 419 0 7 778 26532 19 0 0 chr13 25410856 25413878 -94870434 + L1Md_T LINE L1 2564 5586 -297 7 778 9125 27 0 0 chr13 25413878 25414873 -94869439 + L1Md_T LINE L1 5587 6581 -1 7 778 1224 264 29 35 chr13 25415331 25415676 -94868636 + ORR1D2 LTR MaLR 21 363 -7 7 778 709 326 59 34 chr13 25416144 25416465 -94867847 - MLT1A0 LTR MaLR -4 361 33 7 778 1375 261 38 43 chr13 25416696 25417064 -94867248 + MTEa LTR MaLR 2 367 -12 7 778 360 0 0 0 chr13 25417770 25417810 -94866502 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 778 613 272 141 5 chr13 25418375 25418560 -94865752 - B3A SINE B2 -5 211 2 7 778 24 32 0 0 chr13 25418920 25418951 -94865361 + AT_rich Low_complexity Low_complexity 1 31 0 7 778 320 113 32 0 chr13 25418957 25419019 -94865293 + (CAGA)n Simple_repeat Simple_repeat 1 64 0 7 778 300 27 0 0 chr13 25419047 25419084 -94865228 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 778 1270 177 5 0 chr13 25419714 25419923 -94864389 - URR1B DNA MER1_type -1 224 15 7 778 377 159 159 0 chr13 25420102 25420190 -94864122 - BC1_Mm scRNA scRNA -49 103 2 7 778 251 333 107 61 chr13 25420205 25420336 -94863976 - B1F SINE Alu -5 144 8 7 778 543 282 61 57 chr13 25420668 25420958 -94863354 - MLT1C LTR MaLR -32 435 88 7 778 1371 47 0 0 chr13 25421736 25421907 -94862405 + (TCC)n Simple_repeat Simple_repeat 1 171 0 7 778 714 127 0 0 chr13 25422573 25422699 -94861613 + (TG)n Simple_repeat Simple_repeat 1 126 0 7 778 451 350 64 19 chr13 25422699 25422964 -94861348 - B4A SINE B4 -11 281 5 7 778 25 31 0 0 chr13 25423873 25423905 -94860407 + AT_rich Low_complexity Low_complexity 1 32 0 7 778 865 204 165 0 chr13 25423905 25424081 -94860231 - B3 SINE B2 -10 206 2 7 778 387 0 0 0 chr13 25424101 25424144 -94860168 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 778 487 280 0 0 chr13 25424147 25424247 -94860065 - RSINE1 SINE B4 -25 140 41 7 778 1011 54 146 8 chr13 25424313 25424443 -94859869 - B1_Mus1 SINE Alu 0 148 1 7 778 3288 77 9 5 chr13 25424953 25425372 -94858940 - BGLII LTR ERVK 0 421 1 7 778 619 243 26 88 chr13 25425829 25426023 -94858289 - B3A SINE B2 -16 182 1 7 778 189 0 0 0 chr13 25426463 25426484 -94857828 + (T)n Simple_repeat Simple_repeat 1 21 0 7 778 4693 52 2 0 chr13 25426639 25427183 -94857129 + L1Md_F2 LINE L1 6038 6582 0 7 778 583 51 89 0 chr13 25427189 25427268 -94857044 + L1_Mus3 LINE L1 6144 6229 -409 7 778 383 255 10 31 chr13 25427268 25427365 -94856947 + RMER13A LTR ERVK 702 796 -64 7 778 325 243 14 0 chr13 25427419 25427489 -94856823 - ID4_ SINE ID -7 76 6 7 779 1003 296 49 43 chr13 25428105 25428455 -94855857 - ORR1E LTR MaLR 0 359 8 7 779 301 278 51 10 chr13 25428571 25428669 -94855643 - MER45A DNA Tip100 -24 154 53 7 779 234 324 28 9 chr13 25429962 25430068 -94854244 + CT-rich Low_complexity Low_complexity 3 110 0 7 779 369 304 66 7 chr13 25430090 25430226 -94854086 - B1F SINE Alu -5 144 1 7 779 3551 38 5 0 chr13 25430588 25430982 -94853330 + MTA_Mm LTR MaLR 1 396 0 7 779 2322 165 17 71 chr13 25431164 25431627 -94852685 + RMER10A LTR ERVL 4 441 -1 7 779 504 86 0 0 chr13 25431627 25431697 -94852615 + (TTCC)n Simple_repeat Simple_repeat 4 73 0 7 779 1818 186 90 17 chr13 25431801 25432146 -94852166 + ORR1D2 LTR MaLR 1 370 0 8 779 973 281 92 40 chr13 25432167 25432538 -94851774 - Lx8 LINE L1 -5 7468 7079 8 779 397 310 30 45 chr13 25432636 25432768 -94851544 - RMER13A LTR ERVK -64 796 667 8 779 2289 184 61 11 chr13 25432811 25433256 -94851056 - RMER13A LTR ERVK -393 467 1 8 779 731 100 308 70 chr13 25433988 25434160 -94850152 - ORR1D1 LTR MaLR 0 384 172 8 779 402 114 12 25 chr13 25434160 25434241 -94850071 + GA-rich Low_complexity Low_complexity 1 80 0 8 779 779 178 15 133 chr13 25434273 25434468 -94849844 - ORR1D1 LTR MaLR -202 172 1 8 779 233 163 20 0 chr13 25434512 25434561 -94849751 + GA-rich Low_complexity Low_complexity 5 54 0 8 779 947 162 42 0 chr13 25436017 25436159 -94848153 - B1_Mur1 SINE Alu 0 149 2 8 779 246 291 0 0 chr13 25436325 25436380 -94847932 - B1F SINE Alu -94 55 1 8 779 5511 61 25 4 chr13 25436385 25437063 -94847249 - L1Md_F2 LINE L1 -2 6580 5889 8 779 843 285 22 22 chr13 25437324 25437550 -94846762 + B4A SINE B4 4 229 -63 8 779 350 42 0 20 chr13 25437566 25437615 -94846697 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 779 732 310 56 45 chr13 25438190 25438545 -94845767 - MTEb LTR MaLR 0 379 21 8 779 780 162 0 0 chr13 25438635 25438783 -94845529 + CT-rich Low_complexity Low_complexity 1 148 0 8 779 279 0 0 0 chr13 25438785 25438816 -94845496 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8 779 1064 39 0 0 chr13 25438816 25438943 -94845369 - B1_Mm SINE Alu -9 138 12 8 779 209 210 157 24 chr13 25439500 25439583 -94844729 + L2 LINE L2 2390 2483 -936 8 779 27 29 0 0 chr13 25440604 25440638 -94843674 + AT_rich Low_complexity Low_complexity 1 34 0 8 779 766 280 122 19 chr13 25440815 25441244 -94843068 - L1MD LINE L1 -697 5662 5198 8 779 607 225 6 11 chr13 25441258 25441394 -94842918 + CT-rich Low_complexity Low_complexity 43 179 0 8 779 1351 40 11 6 chr13 25441394 25441572 -94842740 + (TTCTCC)n Simple_repeat Simple_repeat 1 179 0 8 779 607 225 6 11 chr13 25441572 25441615 -94842697 + polypyrimidine Low_complexity Low_complexity 1 42 0 8 779 402 249 58 0 chr13 25441634 25441745 -94842567 - ID_B1 SINE B4 -72 220 93 8 779 238 294 176 0 chr13 25441669 25441754 -94842558 - PB1 SINE Alu -25 102 3 8 779 617 320 112 17 chr13 25441757 25442104 -94842208 - L1MD LINE L1 -947 5199 4820 8 779 551 312 93 20 chr13 25442135 25442534 -94841778 - L1MD LINE L1 -1393 4753 4326 8 779 3584 39 4 132 chr13 25442535 25443035 -94841277 + RLTR10C LTR ERVK 1 436 0 8 779 2817 58 0 0 chr13 25443035 25443378 -94840934 + MMERVK10C-int LTR ERVK 1 343 -7238 8 779 910 152 4 177 chr13 25443376 25443647 -94840665 + MMERVK10C-int LTR ERVK 729 952 -6629 8 779 668 243 158 70 chr13 25443740 25444123 -94840189 + MMERVK10C-int LTR ERVK 2079 2424 -4820 8 779 388 138 6 58 chr13 25444107 25444235 -94840077 + MMERVK10C-int LTR ERVK 1721 1947 -5634 8 779 44452 24 2 10 chr13 25444241 25449314 -94834998 + MMERVK10C-int LTR ERVK 2552 7581 0 8 779 3551 50 0 128 chr13 25449314 25449814 -94834498 + RLTR10C LTR ERVK 1 436 0 8 779 390 139 0 0 chr13 25449909 25449981 -94834331 + (TG)n Simple_repeat Simple_repeat 1 72 0 8 779 245 170 21 0 chr13 25450187 25450234 -94834078 - MTD LTR MaLR -2 417 370 8 779 925 271 87 5 chr13 25450232 25450451 -94833861 - MTD LTR MaLR -181 238 2 8 779 872 201 73 42 chr13 25451763 25451955 -94832357 - B3A SINE B2 0 198 1 8 779 347 305 82 21 chr13 25452199 25452393 -94831919 - MER2 DNA MER2_type -133 212 7 8 779 418 257 8 92 chr13 25453376 25453496 -94830816 + PB1D10 SINE Alu 4 113 -4 8 779 288 258 76 0 chr13 25453530 25453596 -94830716 + ID4 SINE ID 2 72 -11 8 779 414 0 0 0 chr13 25453596 25453642 -94830670 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 779 393 311 0 0 chr13 25454743 25454849 -94829463 - B4A SINE B4 -122 170 65 8 779 2359 139 52 15 chr13 25454978 25455380 -94828932 + MTC LTR MaLR 5 421 0 8 779 391 290 0 10 chr13 25455992 25456093 -94828219 - B3A SINE B2 -98 100 1 8 779 1915 222 25 22 chr13 25456587 25456988 -94827324 + MTD LTR MaLR 3 404 -15 8 779 2579 138 23 3 chr13 25457218 25457604 -94826708 - ORR1B1 LTR MaLR 0 394 1 8 779 1065 274 122 9 chr13 25457906 25458241 -94826071 - MTEa LTR MaLR -4 375 3 8 779 3490 28 10 8 chr13 25458597 25458992 -94825320 + MTA_Mm LTR MaLR 1 396 0 8 779 428 297 36 14 chr13 25459170 25459310 -94825002 - B1F1 SINE Alu -1 148 6 8 779 878 238 146 59 chr13 25459454 25459811 -94824501 + MTD LTR MaLR 18 405 -14 8 779 253 314 96 8 chr13 25460263 25460388 -94823924 + MER5A DNA MER1_type 54 189 0 8 779 240 385 37 16 chr13 25460738 25460928 -94823384 + Tigger16a DNA Tigger 740 933 0 8 779 205 245 50 11 chr13 25461221 25461324 -94822988 + L2a LINE L2 3015 3117 -309 8 779 324 269 75 0 chr13 25461597 25461690 -94822622 + PB1D7 SINE Alu 4 103 -17 8 779 198 0 0 0 chr13 25462708 25462730 -94821582 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 8 779 629 239 63 0 chr13 25462743 25462885 -94821427 - RSINE1 SINE B4 -12 153 3 8 779 5071 97 85 1 chr13 25462981 25463661 -94820651 + RMER19A LTR ERVK 1 737 0 8 779 225 94 0 0 chr13 25464072 25464104 -94820208 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 8 779 764 296 88 51 chr13 25464534 25464887 -94819425 - MTEa LTR MaLR -2 377 12 8 779 1806 196 99 71 chr13 25464888 25465355 -94818957 + MT2A LTR ERVL 2 484 -49 8 779 420 20 0 0 chr13 25465355 25465404 -94818908 + (TC)n Simple_repeat Simple_repeat 1 49 0 8 779 390 114 0 0 chr13 25465404 25465473 -94818839 + (CA)n Simple_repeat Simple_repeat 1 70 0 8 779 1806 196 99 71 chr13 25465473 25465509 -94818803 + MT2A LTR ERVL 485 519 -14 8 779 613 246 30 7 chr13 25466389 25466524 -94817788 - B1F SINE Alu -5 144 7 8 779 445 329 6 42 chr13 25466524 25466557 -94817755 - ID_B1 SINE B4 -5 219 58 8 779 3835 290 42 26 chr13 25466928 25468007 -94816305 + Lx8 LINE L1 6240 7344 -129 8 779 237 65 0 0 chr13 25468007 25468038 -94816274 + (CAG)n Simple_repeat Simple_repeat 2 32 0 8 779 3835 290 42 26 chr13 25468038 25468171 -94816141 + Lx8 LINE L1 7345 7472 -1 8 779 7343 68 7 4 chr13 25468405 25469334 -94814978 - L1Md_F2 LINE L1 0 6582 5652 8 779 21 57 0 0 chr13 25469420 25469455 -94814857 + AT_rich Low_complexity Low_complexity 1 35 0 8 779 362 145 16 0 chr13 25469484 25469546 -94814766 + B3A SINE B2 1 63 -135 8 779 1209 234 54 102 chr13 25469537 25469851 -94814461 - MTE2b LTR MaLR -79 300 2 8 779 249 347 0 0 chr13 25470067 25470139 -94814173 + (TG)n Simple_repeat Simple_repeat 2 73 0 8 779 7323 63 44 6 chr13 25470221 25471179 -94813133 + L1_Mus3 LINE L1 5644 6637 -1 8 779 501 17 0 0 chr13 25471350 25471408 -94812904 + (CA)n Simple_repeat Simple_repeat 2 59 0 8 779 356 296 14 57 chr13 25471480 25471620 -94812692 - MER2 DNA MER2_type -120 225 92 8 779 1814 129 6 52 chr13 25471738 25472064 -94812248 - Lx LINE L1 -943 5711 5393 8 779 7898 132 50 29 chr13 25472070 25473419 -94810893 + Lx4B LINE L1 5677 7054 -4 8 779 1291 75 7 0 chr13 25473801 25474081 -94810231 + (TCTA)n Simple_repeat Simple_repeat 1 281 0 8 779 293 283 196 9 chr13 25474218 25474325 -94809987 - MER2B DNA MER2_type -202 134 8 8 779 328 297 147 25 chr13 25474479 25474676 -94809636 - L1MC4 LINE L1 -4577 1638 1418 8 779 314 350 139 24 chr13 25474766 25474974 -94809338 - Lx8 LINE L1 -131 7342 7111 8 779 350 302 167 8 chr13 25475717 25475837 -94808475 - MTD LTR MaLR -270 149 11 8 779 431 269 210 16 chr13 25476588 25476845 -94807467 + L1MC4 LINE L1 7441 7747 -295 8 779 5293 123 9 50 chr13 25476997 25477837 -94806475 - RLTR13D1 LTR ERVK 0 806 1 8 779 1170 89 0 7 chr13 25477954 25478101 -94806211 - B1_Mus1 SINE Alu -1 147 2 8 779 1066 297 46 63 chr13 25478691 25479086 -94805226 - MTD LTR MaLR -14 405 18 8 779 513 284 190 15 chr13 25480277 25480477 -94803835 + RMER15 LTR ERVL 341 575 0 8 779 273 281 0 0 chr13 25480499 25480556 -94803756 - ID4 SINE ID 0 83 27 8 779 250 269 90 0 chr13 25483206 25483284 -94801028 - Cheshire DNA MER1_type -2169 251 167 8 779 216 185 0 0 chr13 25484518 25484572 -94799740 + (TGG)n Simple_repeat Simple_repeat 1 54 0 8 779 661 246 0 29 chr13 25485778 25485916 -94798396 - B3A SINE B2 -5 193 60 8 779 769 294 83 30 chr13 25486426 25486762 -94797550 + RMER5 LTR ERV1 1 354 -180 8 779 286 260 19 86 chr13 25487544 25487649 -94796663 - RMER5 LTR ERV1 0 534 437 8 779 616 313 127 11 chr13 25490364 25490719 -94793593 - L1MB7 LINE L1 -103 6081 5686 8 779 387 305 0 0 chr13 25490723 25490805 -94793507 + ID4 SINE ID 2 83 0 8 779 306 299 112 0 chr13 25490866 25490973 -94793339 - PB1D7 SINE Alu -1 119 1 8 779 621 260 27 7 chr13 25491304 25491451 -94792861 + ORR1E LTR MaLR 18 167 -192 8 779 952 216 85 198 chr13 25491453 25491643 -94792669 + MTD LTR MaLR 1 193 -226 8 779 3730 42 2 9 chr13 25491643 25492078 -94792234 + L1Md_F2 LINE L1 6151 6582 0 8 779 952 216 85 198 chr13 25492078 25492321 -94791991 + MTD LTR MaLR 194 385 -34 8 779 367 206 101 18 chr13 25492980 25493089 -94791223 - MER53 DNA hAT -74 119 2 8 779 582 15 0 0 chr13 25493148 25493215 -94791097 + (CA)n Simple_repeat Simple_repeat 1 67 0 8 779 502 297 167 40 chr13 25493613 25493937 -94790375 - MTE2b LTR MaLR -14 365 1 8 779 270 0 0 0 chr13 25494167 25494197 -94790115 + (T)n Simple_repeat Simple_repeat 1 30 0 8 779 665 45 11 0 chr13 25494888 25494977 -94789335 + (GA)n Simple_repeat Simple_repeat 1 90 0 8 779 370 359 7 27 chr13 25495702 25495851 -94788461 - B1F SINE Alu -3 146 1 8 779 351 293 58 39 chr13 25495995 25496098 -94788214 + PB1D7 SINE Alu 1 105 -15 8 779 587 303 30 6 chr13 25496109 25496275 -94788037 - B3 SINE B2 -46 170 1 8 779 206 118 0 0 chr13 25497958 25497992 -94786320 + (T)n Simple_repeat Simple_repeat 1 34 0 8 779 293 98 0 0 chr13 25498007 25498048 -94786264 - B1_Mus2 SINE Alu -106 41 1 8 779 248 290 0 0 chr13 25498048 25498067 -94786245 - MT2B LTR ERVL -394 205 146 8 779 281 319 32 0 chr13 25498395 25498489 -94785823 + MTEb LTR MaLR 52 148 -231 8 779 335 324 121 36 chr13 25498481 25498722 -94785590 + MT2A LTR ERVL 178 426 -107 9 779 513 273 146 60 chr13 25499351 25499550 -94784762 - B3A SINE B2 0 216 1 9 779 9222 60 8 0 chr13 25502034 25503407 -94780905 - L1Md_F2 LINE L1 0 6582 5248 1 779 477 0 0 0 chr13 25503407 25503460 -94780852 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 779 9222 72 12 2 chr13 25503460 25503959 -94780353 - L1Md_F2 LINE L1 -636 5247 4737 1 779 627 51 0 0 chr13 25503959 25504038 -94780274 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 3 779 9222 72 12 2 chr13 25504038 25504189 -94780123 - L1Md_F2 LINE L1 -1147 4736 4584 1 779 13547 92 18 11 chr13 25504187 25506929 -94777383 - L1Md_F2 LINE L1 -2705 3178 206 1 779 756 282 57 87 chr13 25507138 25507527 -94776785 + MTEa LTR MaLR 3 379 0 4 779 245 229 62 35 chr13 25507758 25507871 -94776441 - L1M2 LINE L1 -472 5828 5713 5 779 931 242 37 87 chr13 25508439 25508767 -94775545 + ORR1E LTR MaLR 1 367 -3 6 779 225 0 0 0 chr13 25508992 25509017 -94775295 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 779 541 244 123 12 chr13 25509123 25509284 -94775028 - MTEb LTR MaLR -18 361 183 8 779 4293 167 54 24 chr13 25509284 25510155 -94774157 - RLTR13D6 LTR ERVK 0 1023 1 9 779 555 233 9 0 chr13 25510155 25510268 -94774044 - MTEb LTR MaLR -191 188 75 8 779 333 0 0 0 chr13 25511645 25511682 -94772630 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 779 847 272 13 96 chr13 25511697 25512010 -94772302 - B4 SINE B4 -5 287 1 1 779 345 268 45 45 chr13 25512719 25512895 -94771417 - L1MB8 LINE L1 -172 6006 5831 1 779 3037 226 36 87 chr13 25513012 25513374 -94770938 - Lx7 LINE L1 -10 7686 7374 1 779 213 65 0 0 chr13 25513374 25513405 -94770907 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 779 3037 226 36 87 chr13 25513405 25514019 -94770293 - Lx7 LINE L1 -323 7373 6760 1 779 2467 120 40 0 chr13 25514051 25514426 -94769886 + ORR1B1 LTR MaLR 1 390 -4 1 779 4430 196 68 17 chr13 25514435 25515719 -94768593 + ORR1B1-int LTR MaLR 2 1509 0 1 779 2043 157 80 0 chr13 25515720 25516084 -94768228 + ORR1B1 LTR MaLR 2 394 0 1 779 2468 186 34 2 chr13 25516084 25516554 -94767758 - Lx6 LINE L1 -726 6734 6250 1 779 1745 136 2 101 chr13 25516554 25516916 -94767396 + ORR1B1 LTR MaLR 1 386 -8 1 779 942 279 146 33 chr13 25516919 25516998 -94767314 - Lx6 LINE L1 -1205 6255 6177 1 779 475 66 26 0 chr13 25516998 25517074 -94767238 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 779 1400 211 115 32 chr13 25517074 25517509 -94766803 - Lx7 LINE L1 -1543 6153 5683 1 779 565 185 23 40 chr13 25517518 25517647 -94766665 + ORR1A4 LTR MaLR 93 262 -132 1 779 4309 140 85 18 chr13 25517649 25517752 -94766560 - L1_Mur3 LINE L1 -3676 2204 2058 2 779 183 129 0 0 chr13 25517752 25517783 -94766529 + (TATG)n Simple_repeat Simple_repeat 4 34 0 2 779 4921 164 77 45 chr13 25517783 25519765 -94764547 - L1_Mur3 LINE L1 -3823 2057 56 2 779 304 262 0 81 chr13 25519958 25520045 -94764267 - PB1D7 SINE Alu 0 120 41 2 779 847 20 0 0 chr13 25520043 25520143 -94764169 - MT2_Mm LTR ERVL -393 100 1 2 779 670 259 41 31 chr13 25522220 25522415 -94761897 + B3A SINE B2 2 198 0 2 779 1645 171 91 44 chr13 25524086 25524447 -94759865 + ORR1C2 LTR MaLR 5 382 -2 2 779 7059 75 3 19 chr13 25524651 25525756 -94758556 - L1Md_F2 LINE L1 -1 6581 5505 2 779 898 299 119 17 chr13 25526295 25526656 -94757656 + MLT1A1 LTR MaLR 8 405 -3 2 779 250 100 0 0 chr13 25527638 25527678 -94756634 - L1_Mus4 LINE L1 -893 5743 5704 2 779 1786 104 15 0 chr13 25527678 25527947 -94756365 + L1_Mus3 LINE L1 6212 6484 -154 2 779 964 256 169 8 chr13 25527947 25528349 -94755963 + MTD-int LTR MaLR 787 1253 -5 3 779 521 296 202 12 chr13 25528354 25528597 -94755715 + MTD LTR MaLR 1 289 -130 3 779 302 177 32 0 chr13 25528620 25528682 -94755630 + MTD LTR MaLR 336 399 -20 3 779 1165 280 36 70 chr13 25528811 25529209 -94755103 - MTE2a LTR MaLR -14 405 10 3 779 1709 206 52 198 chr13 25529215 25529931 -94754381 - RMER19C LTR ERVK 0 611 1 3 779 4724 79 17 20 chr13 25529987 25530746 -94753566 - L1VL4 LINE L1 -347 3212 2456 3 779 4286 77 12 5 chr13 25530744 25531547 -94752765 - L1VL4 LINE L1 -2041 1518 711 3 779 2344 114 0 3 chr13 25531559 25531902 -94752410 + Lx LINE L1 6300 6641 -13 3 779 314 23 23 0 chr13 25532925 25532968 -94751344 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 3 779 210 295 16 0 chr13 25532988 25533049 -94751263 + GA-rich Low_complexity Low_complexity 5 66 0 3 779 22 0 0 0 chr13 25533165 25533187 -94751125 + AT_rich Low_complexity Low_complexity 1 22 0 3 779 567 0 0 0 chr13 25533196 25533259 -94751053 + (GA)n Simple_repeat Simple_repeat 2 64 0 3 779 311 264 23 0 chr13 25533441 25533528 -94750784 + MLT1A LTR MaLR 53 141 -233 3 779 1469 152 180 17 chr13 25534202 25534496 -94749816 + RMER6C LTR ERVK 3 344 -346 4 779 7595 50 0 3 chr13 25534496 25535549 -94748763 + L1_Mus1 LINE L1 5493 6542 -25 4 779 1229 163 127 67 chr13 25535552 25535632 -94748680 + RMER6C LTR ERVK 308 386 -304 4 779 186 71 0 0 chr13 25535632 25535660 -94748652 + (AGTTG)n Simple_repeat Simple_repeat 3 30 0 4 779 1229 163 127 67 chr13 25535660 25535940 -94748372 + RMER6C LTR ERVK 387 690 0 4 779 499 338 100 76 chr13 25536430 25536981 -94747331 + L1M5 LINE L1 3421 3984 -2162 4 779 31 58 0 0 chr13 25537351 25537403 -94746909 + AT_rich Low_complexity Low_complexity 1 52 0 4 779 26 0 0 0 chr13 25537460 25537486 -94746826 + AT_rich Low_complexity Low_complexity 1 26 0 4 779 286 322 103 17 chr13 25537564 25537681 -94746631 - ID_B1 SINE B4 -4 220 94 4 779 325 324 91 18 chr13 25537582 25537692 -94746620 - B1F1 SINE Alu -31 118 1 4 779 516 274 65 20 chr13 25537731 25537932 -94746380 + B3 SINE B2 1 210 -6 4 779 7470 90 8 2 chr13 25538855 25540231 -94744081 - L1_Mus4 LINE L1 -12 6624 5247 4 779 21 36 0 0 chr13 25540326 25540354 -94743958 + AT_rich Low_complexity Low_complexity 1 28 0 5 779 753 279 152 37 chr13 25540374 25540702 -94743610 + ORR1D2 LTR MaLR 5 370 0 5 779 352 206 299 12 chr13 25541553 25541720 -94742592 - B3 SINE B2 0 216 2 5 779 1141 84 31 0 chr13 25541907 25542581 -94741731 + (TATG)n Simple_repeat Simple_repeat 1 695 0 5 779 369 243 335 82 chr13 25542649 25542882 -94741430 - B4A SINE B4 0 292 1 5 779 249 108 0 0 chr13 25542885 25542922 -94741390 + (TTCTCC)n Simple_repeat Simple_repeat 5 41 0 5 779 255 213 16 16 chr13 25544086 25544148 -94740164 + RMER20B LTR ERVK 559 620 -7 5 779 196 325 86 62 chr13 25544468 25544596 -94739716 - L2b LINE L2 -2 3373 3243 5 779 609 198 31 23 chr13 25546016 25546145 -94738167 - MTEb LTR MaLR -1 378 249 5 779 403 274 151 29 chr13 25549383 25549522 -94734790 + MER5A DNA MER1_type 8 163 -26 5 779 314 309 26 7 chr13 25550100 25550204 -94734108 - B1F SINE Alu -16 104 1 6 779 209 314 135 19 chr13 25550275 25550379 -94733933 - MIRc SINE MIR -110 158 40 6 779 7402 70 14 1 chr13 25551035 25552466 -94731846 - L1_Mus1 LINE L1 0 6567 5110 6 779 4913 101 3 4 chr13 25552463 25553202 -94731110 + L1_Mus1 LINE L1 4375 5112 -771 6 779 189 0 0 0 chr13 25554352 25554373 -94729939 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 6 779 2832 179 40 29 chr13 25554617 25554957 -94729355 - Lx7 LINE L1 0 7696 7357 6 779 189 0 0 0 chr13 25554957 25554978 -94729334 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 6 779 2832 179 40 29 chr13 25554978 25555260 -94729052 - Lx7 LINE L1 -340 7356 7068 6 779 270 289 89 38 chr13 25555319 25555398 -94728914 - B4 SINE B4 -4 288 206 6 779 596 213 9 36 chr13 25555578 25555690 -94728622 + B1_Mur1 SINE Alu 5 113 -36 6 779 600 289 21 26 chr13 25555702 25555854 -94728458 + ID_B1 SINE B4 3 156 -68 6 779 1320 202 123 32 chr13 25555854 25556196 -94728116 + ORR1D1 LTR MaLR 2 374 0 6 779 600 289 21 26 chr13 25556196 25556235 -94728077 + ID_B1 SINE B4 157 193 -31 6 779 23 0 0 0 chr13 25556537 25556560 -94727752 + AT_rich Low_complexity Low_complexity 1 23 0 7 779 3719 69 4 20 chr13 25556566 25557066 -94727246 + L1_Mus2 LINE L1 6074 6565 -1 7 779 815 115 7 20 chr13 25557556 25557707 -94726605 + (TTCC)n Simple_repeat Simple_repeat 2 150 0 7 779 29 28 0 0 chr13 25558414 25558450 -94725862 + AT_rich Low_complexity Low_complexity 1 36 0 7 779 622 298 25 6 chr13 25558451 25558610 -94725702 - RSINE1 SINE B4 -1 164 3 7 779 191 254 66 66 chr13 25558698 25558774 -94725538 + L2a LINE L2 3351 3426 0 7 780 342 0 0 0 chr13 25560615 25560653 -94723659 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 780 188 191 42 21 chr13 25560914 25560962 -94723350 - MER5A DNA MER1_type -131 58 10 7 780 251 248 91 32 chr13 25561120 25561274 -94723038 - L1MA8 LINE L1 -11 6280 6118 7 780 555 222 6 18 chr13 25561284 25561411 -94722901 + CT-rich Low_complexity Low_complexity 38 164 0 7 780 1076 86 23 6 chr13 25561411 25561586 -94722726 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 8 780 555 222 6 18 chr13 25561586 25561603 -94722709 + polypyrimidine Low_complexity Low_complexity 21 37 0 8 780 1034 144 0 6 chr13 25561603 25561784 -94722528 + (TC)n Simple_repeat Simple_repeat 1 180 0 8 780 555 222 6 18 chr13 25561784 25561803 -94722509 + polypyrimidine Low_complexity Low_complexity 2 20 0 8 780 472 322 43 51 chr13 25561814 25562184 -94722128 - L1_Mur3 LINE L1 -2268 3612 3246 8 780 346 197 54 0 chr13 25562198 25562302 -94722010 - L1MC LINE L1 -2386 3760 3651 8 780 1701 199 23 29 chr13 25562309 25562656 -94721656 + ORR1B1 LTR MaLR 11 355 -39 8 780 26755 150 10 32 chr13 25562656 25565131 -94719181 + L1_Mus3 LINE L1 609 3006 -2877 8 780 258 56 0 0 chr13 25565131 25565167 -94719145 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 8 780 26755 125 12 7 chr13 25565167 25568777 -94715535 + L1_Mus3 LINE L1 3007 6634 -4 8 780 412 109 0 0 chr13 25568787 25568842 -94715470 + ORR1A3 LTR MaLR 272 326 0 8 780 276 264 68 11 chr13 25569036 25569124 -94715188 + ORR1B1 LTR MaLR 315 407 -14 8 780 509 0 16 0 chr13 25569299 25569360 -94714952 + (CA)n Simple_repeat Simple_repeat 2 63 0 9 780 326 107 18 0 chr13 25570123 25570179 -94714133 + (CAAAAA)n Simple_repeat Simple_repeat 4 60 0 9 780 272 291 0 60 chr13 25570391 25570475 -94713837 + PB1D7 SINE Alu 40 118 -2 9 780 509 285 32 32 chr13 25570504 25570689 -94713623 + MER2 DNA MER2_type 90 274 -71 9 780 232 278 14 27 chr13 25570744 25570818 -94713494 + Charlie1a DNA MER1_type 1135 1207 -248 9 780 595 263 80 40 chr13 25570884 25571083 -94713229 - B3 SINE B2 -4 191 1 9 780 180 0 0 0 chr13 25571407 25571427 -94712885 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9 780 183 224 11 34 chr13 25572775 25572863 -94711449 + CT-rich Low_complexity Low_complexity 3 88 0 9 780 553 291 214 10 chr13 25573276 25573575 -94710737 + MLT1A0 LTR MaLR 6 365 0 9 780 2976 28 2 143 chr13 25573745 25574199 -94710113 - RLTR10 LTR ERVK 0 390 1 9 780 22 0 0 0 chr13 25574942 25574964 -94709348 + AT_rich Low_complexity Low_complexity 1 22 0 1 780 545 358 174 18 chr13 25575376 25575703 -94708609 + MER70B LTR ERVL 7 384 -194 1 780 293 0 0 26 chr13 25575787 25575825 -94708487 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 780 354 333 81 49 chr13 25575828 25576099 -94708213 - B4A SINE B4 -18 274 26 1 780 1433 78 18 5 chr13 25576343 25576561 -94707751 - L1_Mus3 LINE L1 -7 6631 6411 1 780 410 201 72 124 chr13 25576850 25576881 -94707431 + MT2B LTR ERVL 135 157 -444 1 780 812 173 0 16 chr13 25576881 25577010 -94707302 + B1_Mur3 SINE Alu 2 128 -21 1 780 927 265 49 38 chr13 25577252 25577519 -94706793 + B4 SINE B4 3 272 -20 1 780 516 175 0 0 chr13 25577544 25577641 -94706671 + (CATATA)n Simple_repeat Simple_repeat 6 102 0 1 780 302 290 78 78 chr13 25578535 25578677 -94705635 - B1F SINE Alu -6 143 2 1 780 240 143 0 0 chr13 25578693 25578735 -94705577 + (TATG)n Simple_repeat Simple_repeat 4 45 0 1 780 961 52 15 0 chr13 25578736 25578872 -94705440 + (TCTA)n Simple_repeat Simple_repeat 3 140 0 1 780 6469 112 29 10 chr13 25579601 25580521 -94703791 + Lx LINE L1 5594 6518 -136 1 780 189 0 0 0 chr13 25580521 25580542 -94703770 + (TGGG)n Simple_repeat Simple_repeat 1 21 0 1 780 6469 112 29 10 chr13 25580542 25580662 -94703650 + Lx LINE L1 6519 6652 -2 1 780 537 16 0 0 chr13 25580984 25581046 -94703266 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 780 351 0 0 0 chr13 25581054 25581093 -94703219 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 780 323 289 10 30 chr13 25581107 25581207 -94703105 - RSINE1 SINE B4 -64 101 4 1 780 234 208 0 0 chr13 25581568 25581621 -94702691 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 1 780 222 37 0 0 chr13 25581852 25581879 -94702433 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 780 3445 28 0 2 chr13 25582368 25582765 -94701547 - MTA_Mm LTR MaLR 0 396 1 1 780 253 264 88 52 chr13 25582788 25582924 -94701388 + RMER17C LTR ERVK 178 318 -92 1 780 411 264 11 0 chr13 25582856 25582947 -94701365 - B3 SINE B2 -28 188 97 1 780 542 218 24 56 chr13 25582957 25583083 -94701229 - B3A SINE B2 -74 124 3 1 780 303 96 0 0 chr13 25583464 25583516 -94700796 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 780 310 343 49 53 chr13 25583767 25584013 -94700299 - HAL1 LINE L1 -1423 1084 840 1 780 1029 211 14 19 chr13 25584017 25584230 -94700082 - B3 SINE B2 0 216 5 1 780 21 36 0 0 chr13 25584317 25584345 -94699967 + AT_rich Low_complexity Low_complexity 1 28 0 1 780 349 293 31 14 chr13 25584416 25584569 -94699743 - MLT1E3 LTR MaLR -2 622 349 1 780 280 265 12 24 chr13 25584850 25584935 -94699377 + GA-rich Low_complexity Low_complexity 3 86 0 1 780 533 344 63 70 chr13 25585549 25585744 -94698568 + MLT1A0 LTR MaLR 1 189 -176 1 780 324 0 0 0 chr13 25585744 25585780 -94698532 + (TC)n Simple_repeat Simple_repeat 2 37 0 1 780 333 68 0 0 chr13 25585780 25585823 -94698489 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 780 533 247 37 94 chr13 25585823 25585952 -94698360 + MLT1A0 LTR MaLR 190 344 -46 1 780 207 0 0 0 chr13 25586197 25586220 -94698092 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 780 486 0 0 0 chr13 25586953 25587007 -94697305 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 780 452 18 18 0 chr13 25587007 25587064 -94697248 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 1 780 225 154 0 0 chr13 25587111 25587150 -94697162 + (CG)n Simple_repeat Simple_repeat 1 39 0 1 780 754 271 10 25 chr13 25587634 25587831 -94696481 - B3 SINE B2 -19 197 4 1 780 350 273 0 0 chr13 25588388 25588465 -94695847 + ID4_ SINE ID 2 78 -5 1 780 341 368 32 21 chr13 25588592 25588778 -94695534 + L1MC LINE L1 2289 2476 -3670 1 780 775 265 27 7 chr13 25589027 25589320 -94694992 + L1MC LINE L1 3016 3314 -2832 1 780 386 374 70 28 chr13 25589824 25590110 -94694202 - MLT1J-int LTR MaLR -3 1384 1087 1 780 287 327 38 25 chr13 25590117 25590277 -94694035 + MTD LTR MaLR 6 167 -252 1 780 255 364 11 0 chr13 25590603 25590779 -94693533 + (CAT)n Simple_repeat Simple_repeat 3 180 0 1 780 216 337 0 0 chr13 25590853 25590954 -94693358 + (CACCAT)n Simple_repeat Simple_repeat 5 105 0 1 780 611 291 131 36 chr13 25590981 25591210 -94693102 + RMER15 LTR ERVL 275 530 -45 1 780 375 23 0 0 chr13 25591210 25591254 -94693058 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 780 611 291 131 36 chr13 25591254 25591299 -94693013 + RMER15 LTR ERVL 531 574 -1 1 780 309 232 82 67 chr13 25591301 25591435 -94692877 + MLT1A1 LTR MaLR 269 404 -4 1 780 538 262 49 86 chr13 25592631 25592794 -94691518 + B3A SINE B2 38 194 -4 1 780 2445 224 35 7 chr13 25593017 25593560 -94690752 - Lx5 LINE L1 -1 7049 6492 1 780 312 27 0 0 chr13 25594580 25594617 -94689695 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 780 1442 227 59 6 chr13 25594693 25595048 -94689264 - ORR1D1 LTR MaLR 0 374 1 1 780 296 357 98 41 chr13 25595610 25595639 -94688673 + MER110 LTR ERV1 168 198 -293 1 780 1195 106 0 27 chr13 25595639 25595823 -94688489 - B2_Mm2 SINE B2 -15 180 2 1 780 296 357 98 41 chr13 25595823 25596088 -94688224 + MER110 LTR ERV1 199 478 -13 1 780 310 239 123 74 chr13 25596732 25596854 -94687458 + MTEa LTR MaLR 251 378 -1 1 780 789 11 0 0 chr13 25597405 25597495 -94686817 + (TC)n Simple_repeat Simple_repeat 1 90 0 1 780 198 0 0 0 chr13 25597495 25597516 -94686796 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 780 576 0 0 0 chr13 25598270 25598334 -94685978 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 780 268 355 36 9 chr13 25598353 25598464 -94685848 - ORR1E LTR MaLR -223 136 23 1 780 249 226 19 0 chr13 25599186 25599239 -94685073 - RLTR21 LTR ERVK 0 1572 1519 1 780 1956 266 137 88 chr13 25599316 25600442 -94683870 - RMER12 LTR ERVK -141 1181 1 1 780 414 0 0 0 chr13 25600550 25600596 -94683716 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 780 270 291 139 0 chr13 25602009 25602088 -94682224 + ID_B1 SINE B4 134 223 -1 1 780 267 354 32 63 chr13 25602527 25602780 -94681532 + MIR SINE MIR 4 248 -14 1 780 426 339 31 0 chr13 25602922 25603052 -94681260 + B1F1 SINE Alu 1 134 -15 1 780 198 0 0 0 chr13 25603061 25603083 -94681229 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 780 378 0 0 0 chr13 25604324 25604366 -94679946 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 780 836 287 67 43 chr13 25604386 25604641 -94679671 - B4A SINE B4 -31 261 1 1 780 21 0 0 0 chr13 25605638 25605659 -94678653 + AT_rich Low_complexity Low_complexity 1 21 0 1 780 618 272 80 21 chr13 25605862 25606050 -94678262 - B4 SINE B4 -88 204 6 1 780 192 40 0 0 chr13 25607144 25607169 -94677143 + (A)n Simple_repeat Simple_repeat 1 25 0 1 780 623 256 21 146 chr13 25607169 25607361 -94676951 + ID_B1 SINE B4 50 217 -7 1 780 262 213 23 23 chr13 25609106 25609284 -94675028 + GA-rich Low_complexity Low_complexity 1 178 0 1 780 180 0 0 0 chr13 25609335 25609355 -94674957 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 780 789 11 0 0 chr13 25609355 25609444 -94674868 + (GA)n Simple_repeat Simple_repeat 1 90 0 1 780 195 100 0 0 chr13 25610125 25610155 -94674157 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 780 329 320 19 28 chr13 25610216 25610322 -94673990 - B4 SINE B4 -2 290 186 1 780 318 200 0 0 chr13 25610322 25610387 -94673925 - L1_Mur3 LINE L1 -424 5456 5392 1 780 998 269 141 10 chr13 25610628 25610932 -94673380 + ORR1E LTR MaLR 6 349 -10 1 780 198 405 16 41 chr13 25611773 25611894 -94672418 - MIRm SINE MIR -81 195 78 1 780 696 12 0 0 chr13 25612513 25612594 -94671718 + (TC)n Simple_repeat Simple_repeat 2 82 0 1 780 261 0 0 0 chr13 25612595 25612624 -94671688 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 780 279 79 0 0 chr13 25612813 25612851 -94671461 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1 780 1043 45 0 43 chr13 25613036 25613177 -94671135 + B1_Mus1 SINE Alu 14 148 0 1 780 396 0 0 0 chr13 25613497 25613541 -94670771 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 780 23 33 0 0 chr13 25614405 25614435 -94669877 + AT_rich Low_complexity Low_complexity 1 30 0 1 780 1092 71 7 7 chr13 25614441 25614583 -94669729 - B1_Mm SINE Alu -5 142 1 1 780 339 25 0 0 chr13 25614955 25614995 -94669317 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 780 652 254 85 15 chr13 25616585 25616730 -94667582 + B3 SINE B2 1 146 -70 1 780 194 0 39 0 chr13 25616730 25616756 -94667556 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 780 652 254 85 15 chr13 25616756 25616810 -94667502 + B3 SINE B2 147 213 -3 1 780 509 287 40 101 chr13 25616833 25617012 -94667300 - B3A SINE B2 0 216 48 1 780 30369 81 4 2 chr13 25617082 25622347 -94661965 + L1Md_F2 LINE L1 311 5586 -297 1 780 7737 60 1 8 chr13 25622347 25623347 -94660965 + L1Md_F2 LINE L1 5587 6579 -3 1 780 23 68 0 0 chr13 25623347 25623391 -94660921 + AT_rich Low_complexity Low_complexity 1 44 0 1 780 2278 325 46 24 chr13 25623572 25624418 -94659894 - Lx8 LINE L1 -9 7464 6591 1 780 3029 105 7 5 chr13 25624418 25624867 -94659445 - L1_Mus4 LINE L1 0 6636 6187 1 780 2278 325 46 24 chr13 25624867 25625098 -94659214 - Lx8 LINE L1 -883 6590 6363 1 780 639 299 82 31 chr13 25625093 25625507 -94658805 - Lx7 LINE L1 -1484 6212 5778 1 780 3425 177 59 45 chr13 25625510 25626586 -94657726 - Lx3_Mus LINE L1 -931 6078 4973 1 780 316 296 116 0 chr13 25626850 25627022 -94657290 - L1MD LINE L1 -1911 4235 4044 1 780 274 313 41 35 chr13 25627021 25627190 -94657122 - L1MD LINE L1 -456 5786 5617 1 780 433 278 74 68 chr13 25627241 25627491 -94656821 - L1MD LINE L1 -2144 4002 3752 1 780 1961 165 60 17 chr13 25627491 25627843 -94656469 - ORR1B2 LTR MaLR 0 367 1 1 780 433 278 74 68 chr13 25627843 25627901 -94656411 - L1MD LINE L1 -2395 3751 3692 1 780 583 123 30 15 chr13 25627958 25628090 -94656222 + GA-rich Low_complexity Low_complexity 3 136 0 1 780 1192 87 29 0 chr13 25628212 25628420 -94655892 - L1_Mm LINE L1 -4124 1759 1546 1 780 264 30 0 0 chr13 25628422 25628455 -94655857 + (T)n Simple_repeat Simple_repeat 1 33 0 1 780 39588 3 0 0 chr13 25628477 25635059 -94649253 - L1Md_A LINE L1 0 6582 1 2 780 1595 59 0 0 chr13 25635070 25635291 -94649021 - L1_Mm LINE L1 -4312 1571 1351 1 780 2177 74 0 10 chr13 25635293 25635592 -94648720 + L1Md_F2 LINE L1 6287 6582 0 2 780 1248 201 9 99 chr13 25635786 25636298 -94648014 - Lx7 LINE L1 0 7696 6992 2 780 835 37 19 0 chr13 25637122 25637229 -94647083 + B1_Mm SINE Alu 30 138 -9 2 780 360 226 20 95 chr13 25637132 25637230 -94647082 + RLTR25B LTR ERVK 441 532 -496 2 780 3838 75 0 83 chr13 25637230 25637796 -94646516 - MURVY-LTR LTR ERV1 0 519 1 2 780 360 226 20 95 chr13 25637796 25637844 -94646468 + RLTR25B LTR ERVK 533 576 -452 2 780 226 265 24 12 chr13 25638084 25638168 -94646144 - L1MD LINE L1 -2651 3495 3411 1 780 1222 246 186 27 chr13 25641224 25641665 -94642647 + RMER5 LTR ERV1 5 516 -18 2 780 1093 119 6 0 chr13 25641665 25641824 -94642488 + B2_Mm1t SINE B2 1 160 -33 2 780 1128 104 49 6 chr13 25641824 25641988 -94642324 + B2_Mm2 SINE B2 1 171 -24 2 780 287 21 0 113 chr13 25642003 25642028 -94642284 + (T)n Simple_repeat Simple_repeat 1 25 0 2 780 982 82 0 70 chr13 25642028 25642186 -94642126 - B1_Mm SINE Alu 0 147 1 2 780 287 21 0 113 chr13 25642186 25642213 -94642099 + (T)n Simple_repeat Simple_repeat 1 22 0 2 780 1326 157 14 0 chr13 25642740 25642957 -94641355 + RMER6D LTR ERVK 1 220 -500 2 780 323 331 6 51 chr13 25642973 25643129 -94641183 + L1M2 LINE L1 4896 5044 -1099 2 780 833 264 88 4 chr13 25643159 25643680 -94640632 + L1M2 LINE L1 5167 5739 -561 2 780 1079 244 84 55 chr13 25644193 25644536 -94639776 - RMER19C LTR ERVK -258 353 1 2 780 198 0 0 0 chr13 25644983 25645005 -94639307 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 780 324 347 56 22 chr13 25645056 25645236 -94639076 - L1M5 LINE L1 -400 5724 5539 2 780 242 336 73 69 chr13 25645257 25645464 -94638848 - MIRc SINE MIR -21 247 37 2 780 28 29 0 0 chr13 25645888 25645923 -94638389 + AT_rich Low_complexity Low_complexity 1 35 0 2 780 295 310 102 14 chr13 25646295 25646442 -94637870 + MIR3 SINE MIR 41 200 -8 2 780 303 267 52 0 chr13 25648072 25648188 -94636124 + CT-rich Low_complexity Low_complexity 3 124 0 2 780 237 378 0 0 chr13 25648188 25648278 -94636034 - PB1 SINE Alu -8 119 30 2 780 547 294 7 7 chr13 25648389 25648533 -94635779 - RSINE1 SINE B4 -19 146 3 2 780 22 0 0 0 chr13 25648689 25648711 -94635601 + AT_rich Low_complexity Low_complexity 1 22 0 2 780 541 221 13 4 chr13 25649336 25649446 -94634866 - B1_Mur1 SINE Alu -28 121 12 2 780 465 266 103 38 chr13 25649450 25649817 -94634495 - L1M2 LINE L1 -1399 5604 5214 2 780 1223 221 199 3 chr13 25649832 25650164 -94634148 + MTD LTR MaLR 18 414 -5 2 780 1205 157 14 0 chr13 25650293 25650509 -94633803 - Lx2A1 LINE L1 -4 7004 6786 2 780 267 246 96 56 chr13 25650555 25650680 -94633632 - L1M2 LINE L1 -1958 5045 4916 2 780 1788 308 74 30 chr13 25650769 25652317 -94631995 - L1M2 LINE L1 -2376 4627 3012 2 780 363 180 247 0 chr13 25652584 25652673 -94631639 - PB1D9 SINE Alu -3 117 7 2 780 1197 205 22 51 chr13 25652735 25653048 -94631264 - Lx9 LINE L1 -182 7462 7159 2 780 198 0 0 0 chr13 25653320 25653342 -94630970 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2 780 251 241 68 0 chr13 25653424 25653586 -94630726 + (TTATA)n Simple_repeat Simple_repeat 5 177 0 2 780 401 308 89 9 chr13 25653711 25654008 -94630304 - L1M2 LINE L1 -4287 2720 2276 2 780 21 0 0 0 chr13 25654307 25654328 -94629984 + AT_rich Low_complexity Low_complexity 1 21 0 2 780 191 239 15 0 chr13 25656707 25656774 -94627538 + CT-rich Low_complexity Low_complexity 3 70 0 2 780 200 273 0 0 chr13 25657945 25657989 -94626323 + CT-rich Low_complexity Low_complexity 6 49 0 2 780 236 325 49 49 chr13 25658351 25658432 -94625880 - B4A SINE B4 0 292 212 2 780 23 54 0 0 chr13 25658994 25659031 -94625281 + AT_rich Low_complexity Low_complexity 1 37 0 2 780 317 305 0 0 chr13 25659687 25659769 -94624543 - ID4 SINE ID 0 83 2 2 780 850 295 33 84 chr13 25659865 25660224 -94624088 + ORR1E LTR MaLR 4 344 -15 2 780 477 0 0 0 chr13 25660422 25660475 -94623837 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 780 27 29 0 0 chr13 25663084 25663118 -94621194 + AT_rich Low_complexity Low_complexity 1 34 0 2 780 424 289 35 101 chr13 25663630 25663888 -94620424 + L1MEg LINE L1 1748 1988 -5114 2 780 295 320 45 49 chr13 25663893 25664136 -94620176 + L1M4 LINE L1 823 1064 -5478 2 780 281 310 23 11 chr13 25664340 25664428 -94619884 + PB1D10 SINE Alu 21 109 -8 2 780 24 0 0 0 chr13 25664489 25664513 -94619799 + GC_rich Low_complexity Low_complexity 1 24 0 2 780 302 299 26 46 chr13 25664721 25664872 -94619440 + L1MEg LINE L1 2560 2707 -4627 2 780 1078 264 19 25 chr13 25665097 25665479 -94618833 + Lx9 LINE L1 5498 5914 -1730 2 780 911 164 7 0 chr13 25665707 25665853 -94618459 - B1_Mus2 SINE Alu 0 147 1 2 780 2330 300 85 31 chr13 25665943 25666963 -94617349 + Lx9 LINE L1 6358 7432 -212 2 780 318 94 19 0 chr13 25666965 25667018 -94617294 - Lx LINE L1 -354 6300 6247 2 780 1283 129 10 7 chr13 25667010 25667222 -94617090 + MusHAL1 LINE L1 783 991 -5991 2 780 2617 295 58 36 chr13 25667316 25667630 -94616682 + Lx9 LINE L1 6292 6620 -1024 2 780 3199 58 2 2 chr13 25667630 25668026 -94616286 - MTA_Mm LTR MaLR 0 396 1 2 780 2617 295 58 36 chr13 25668026 25668684 -94615628 + Lx9 LINE L1 6621 7285 -359 2 780 247 180 0 74 chr13 25669000 25669054 -94615258 - RMER15 LTR ERVL -440 135 86 2 780 234 178 0 0 chr13 25669614 25669659 -94614653 + B3A SINE B2 1 45 -153 2 780 258 272 21 11 chr13 25669762 25669855 -94614457 + (TCTCTG)n Simple_repeat Simple_repeat 6 99 0 2 780 202 164 36 0 chr13 25669857 25669912 -94614400 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 2 780 2519 288 53 48 chr13 25669912 25670837 -94613475 - Lx7 LINE L1 -674 7022 6093 2 780 552 296 12 50 chr13 25670846 25671006 -94613306 + B3A SINE B2 31 184 -14 2 780 234 282 40 8 chr13 25671116 25671241 -94613071 + (CATATA)n Simple_repeat Simple_repeat 3 131 0 2 780 451 272 0 95 chr13 25671346 25671472 -94612840 + ID_B1 SINE B4 86 199 -25 2 780 249 243 0 0 chr13 25671472 25671542 -94612770 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 780 192 163 0 0 chr13 25671559 25671602 -94612710 + GA-rich Low_complexity Low_complexity 2 44 0 2 780 342 0 0 0 chr13 25671674 25671712 -94612600 + (CTAA)n Simple_repeat Simple_repeat 3 40 0 2 780 308 362 55 0 chr13 25671856 25671983 -94612329 - B1F1 SINE Alu -1 148 15 2 780 349 309 82 0 chr13 25672182 25672279 -94612033 - RSINE1 SINE B4 -47 118 14 2 780 1669 216 129 25 chr13 25672439 25672952 -94611360 + Lx7 LINE L1 7123 7688 -8 2 780 1249 73 56 0 chr13 25672957 25673136 -94611176 - L1Md_F2 LINE L1 -33 6549 6361 2 780 2212 88 23 73 chr13 25673441 25673785 -94610527 - ORR1A2 LTR MaLR 0 327 1 2 780 351 0 0 0 chr13 25673951 25673990 -94610322 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2 780 267 143 0 0 chr13 25677004 25677046 -94607266 + MLT1C LTR MaLR 5 46 -319 2 780 1949 219 46 52 chr13 25677688 25678188 -94606124 + RMER20A LTR ERVK 20 516 0 2 780 684 182 199 34 chr13 25678274 25678450 -94605862 - B3 SINE B2 -10 206 2 2 780 518 286 165 42 chr13 25678456 25678982 -94605330 - L1MEc LINE L1 -4160 2240 1650 2 780 304 288 163 22 chr13 25679301 25679436 -94604876 - HAL1-3A_ME LINE L1 -419 2439 2286 2 780 351 317 26 70 chr13 25679470 25679626 -94604686 - B1F1 SINE Alu 0 149 1 2 780 270 179 0 0 chr13 25680020 25680076 -94604236 + (CATA)n Simple_repeat Simple_repeat 2 57 0 2 780 344 328 83 46 chr13 25680124 25680468 -94603844 + MLT1C LTR MaLR 10 449 -18 2 780 28 0 0 0 chr13 25681152 25681180 -94603132 + AT_rich Low_complexity Low_complexity 1 28 0 2 780 21 0 0 0 chr13 25681260 25681281 -94603031 + AT_rich Low_complexity Low_complexity 1 21 0 2 780 690 323 18 0 chr13 25681507 25681733 -94602579 - Lx8 LINE L1 -569 6904 6675 2 780 305 265 301 6 chr13 25681757 25681920 -94602392 + Lx8 LINE L1 7235 7445 -28 2 780 28 0 0 0 chr13 25683076 25683104 -94601208 + AT_rich Low_complexity Low_complexity 1 28 0 2 780 288 0 0 0 chr13 25683756 25683788 -94600524 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 780 605 221 21 35 chr13 25683789 25683930 -94600382 - B1F2 SINE Alu -7 142 4 2 780 206 62 31 0 chr13 25685161 25685193 -94599119 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 780 576 321 40 18 chr13 25686996 25687218 -94597094 - RMER15 LTR ERVL 0 575 349 2 780 24 0 0 0 chr13 25688176 25688200 -94596112 + AT_rich Low_complexity Low_complexity 1 24 0 2 780 1203 289 10 3 chr13 25688338 25688626 -94595686 + B4 SINE B4 2 291 -1 2 780 405 0 0 0 chr13 25688629 25688674 -94595638 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 781 380 313 139 77 chr13 25690113 25690400 -94593912 - ORR1E LTR MaLR -54 305 1 2 781 270 221 176 0 chr13 25690525 25690593 -94593719 - B3A SINE B2 -115 83 4 2 781 674 246 59 43 chr13 25691010 25691197 -94593115 + MTD LTR MaLR 1 190 -229 2 781 890 225 55 117 chr13 25691279 25691536 -94592776 + MTD LTR MaLR 165 405 -14 2 781 898 237 77 39 chr13 25691739 25691972 -94592340 + B4A SINE B4 29 270 -22 2 781 675 78 8 17 chr13 25691980 25692098 -94592214 + (CA)n Simple_repeat Simple_repeat 1 117 0 2 781 1361 51 6 0 chr13 25693171 25693349 -94590963 + (GGGAGA)n Simple_repeat Simple_repeat 1 179 0 2 781 200 244 45 46 chr13 25693893 25693958 -94590354 - L2a LINE L2 -36 3390 3270 2 781 1660 31 0 0 chr13 25694235 25694428 -94589884 + B2_Mm1t SINE B2 1 193 0 2 781 243 0 0 0 chr13 25694691 25694718 -94589594 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 781 345 311 33 0 chr13 25694764 25694854 -94589458 + RSINE1 SINE B4 67 159 -6 2 781 4864 64 5 3 chr13 25695018 25695647 -94588665 + L1Md_F2 LINE L1 5940 6569 -13 2 781 234 170 113 0 chr13 25695862 25695915 -94588397 + RMER15 LTR ERVL 22 80 -495 2 781 2429 21 0 0 chr13 25695915 25696197 -94588115 - L1_Mm LINE L1 -977 4906 4625 2 781 2812 30 0 0 chr13 25696197 25696531 -94587781 + L1Md_A LINE L1 6249 6582 0 3 781 1588 269 77 43 chr13 25696532 25697025 -94587287 + RMER15 LTR ERVL 66 575 0 2 781 647 294 60 5 chr13 25697159 25697344 -94586968 - B3A SINE B2 0 198 4 3 781 1953 124 54 20 chr13 25697487 25697840 -94586472 - L1_Mur1 LINE L1 -548 5338 4974 3 781 23 0 0 0 chr13 25698862 25698885 -94585427 + AT_rich Low_complexity Low_complexity 1 23 0 3 781 412 307 205 23 chr13 25698888 25699322 -94584990 - L1ME3A LINE L1 -13 6160 5648 3 781 634 194 0 19 chr13 25699499 25699657 -94584655 + (TATATG)n Simple_repeat Simple_repeat 3 157 0 3 781 511 266 50 0 chr13 25699922 25700061 -94584251 - B1F2 SINE Alu 0 149 4 3 781 183 129 0 0 chr13 25701440 25701471 -94582841 + (T)n Simple_repeat Simple_repeat 1 31 0 3 781 467 260 138 23 chr13 25702631 25702761 -94581551 + RSINE1 SINE B4 2 146 -19 3 781 396 279 39 0 chr13 25702810 25702914 -94581398 + PB1D10 SINE Alu 3 110 -7 3 781 297 311 72 43 chr13 25702980 25703118 -94581194 - RSINE1 SINE B4 -12 153 12 3 781 265 333 14 0 chr13 25703464 25703536 -94580776 + ID4_ SINE ID 2 74 -9 3 781 21 0 0 0 chr13 25704490 25704511 -94579801 + AT_rich Low_complexity Low_complexity 1 21 0 3 781 1158 47 18 0 chr13 25704655 25704825 -94579487 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 3 781 507 73 0 0 chr13 25704911 25704979 -94579333 + (TA)n Simple_repeat Simple_repeat 1 68 0 3 781 1386 228 103 39 chr13 25705073 25705457 -94578855 - MTD LTR MaLR -14 405 12 3 781 21 0 0 0 chr13 25705492 25705513 -94578799 + AT_rich Low_complexity Low_complexity 1 21 0 3 781 802 336 29 32 chr13 25705637 25705917 -94578395 - B4A SINE B4 -8 284 6 3 781 237 323 60 0 chr13 25706563 25706696 -94577616 - B1F SINE Alu -8 141 1 3 781 429 116 0 0 chr13 25707138 25707207 -94577105 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 781 581 296 23 61 chr13 25709533 25709843 -94574469 - L1MA4 LINE L1 -31 6269 5972 3 781 236 179 111 19 chr13 25710884 25710992 -94573320 + L1MEc LINE L1 1369 1486 -4914 3 781 1103 107 0 6 chr13 25710989 25711149 -94573163 + L1_Mur2 LINE L1 5070 5228 -649 3 781 381 43 0 0 chr13 25711166 25711213 -94573099 + (CTA)n Simple_repeat Simple_repeat 1 47 0 3 781 8730 132 20 3 chr13 25711217 25712708 -94571604 - Lx3C LINE L1 -1 6975 5458 3 781 4977 153 34 19 chr13 25712709 25713589 -94570723 + Lx4A LINE L1 6165 7057 -1 3 781 240 59 0 0 chr13 25713954 25713988 -94570324 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 781 302 278 25 65 chr13 25714546 25714746 -94569566 + L1MEc LINE L1 1957 2148 -4252 3 781 452 336 20 14 chr13 25714828 25714976 -94569336 + RSINE1 SINE B4 1 149 -16 3 781 291 114 0 0 chr13 25714989 25715033 -94569279 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 781 5341 82 8 1 chr13 25715232 25715957 -94568355 + L1_Mus3 LINE L1 5909 6638 0 3 781 647 234 0 28 chr13 25716008 25716149 -94568163 + B1_Mur3 SINE Alu 13 149 0 3 781 1375 263 31 26 chr13 25716103 25716485 -94567827 + MTC LTR MaLR 33 416 -5 3 781 557 292 48 63 chr13 25716653 25717175 -94567137 + L1MEc LINE L1 2535 3048 -3271 3 781 414 0 0 0 chr13 25717457 25717503 -94566809 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 781 22 0 0 0 chr13 25718608 25718630 -94565682 + AT_rich Low_complexity Low_complexity 1 22 0 3 781 237 270 85 7 chr13 25719335 25719488 -94564824 + L1MB4 LINE L1 6006 6170 -10 3 781 268 304 98 65 chr13 25721092 25721215 -94563097 + RSINE1 SINE B4 35 161 -4 3 781 676 11 11 32 chr13 25721218 25721312 -94563000 + (CA)n Simple_repeat Simple_repeat 1 92 0 3 781 24 32 0 0 chr13 25721421 25721452 -94562860 + AT_rich Low_complexity Low_complexity 1 31 0 3 781 250 325 0 0 chr13 25723743 25723820 -94560492 + CT-rich Low_complexity Low_complexity 3 79 0 3 781 233 29 29 0 chr13 25724093 25724127 -94560185 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 781 497 310 61 61 chr13 25724968 25725215 -94559097 + RMER20B LTR ERVK 170 416 -211 3 781 1004 215 31 35 chr13 25725221 25725322 -94558990 - Lx7 LINE L1 -589 7107 7006 3 781 867 184 131 236 chr13 25725322 25725476 -94558836 + ORR1C2 LTR MaLR 1 173 -211 3 781 1040 73 6 33 chr13 25725476 25725659 -94558653 + (TCTCC)n Simple_repeat Simple_repeat 3 180 0 3 781 867 184 131 236 chr13 25725659 25725931 -94558381 + ORR1C2 LTR MaLR 174 382 -2 3 781 1004 215 31 35 chr13 25725931 25726089 -94558223 - Lx7 LINE L1 -691 7005 6849 3 781 267 299 8 45 chr13 25726154 25726287 -94558025 - Lx7 LINE L1 -1493 6203 6076 3 781 669 270 0 0 chr13 25726317 25726480 -94557832 - Lx7 LINE L1 -846 6850 6688 3 781 21 57 0 0 chr13 25728145 25728180 -94556132 + AT_rich Low_complexity Low_complexity 1 35 0 3 781 1261 164 5 22 chr13 25729328 25729552 -94554760 + URR1B DNA MER1_type 5 224 -1 3 781 540 320 32 93 chr13 25729996 25730275 -94554037 + MTEa LTR MaLR 1 262 -117 3 781 244 192 175 25 chr13 25730610 25730690 -94553622 + MTEa LTR MaLR 288 379 0 3 781 712 304 62 10 chr13 25730690 25731108 -94553204 - L1ME2z LINE L1 -82 6362 5923 3 781 672 249 73 0 chr13 25731390 25731555 -94552757 + MTD LTR MaLR 8 184 -235 3 781 610 252 150 65 chr13 25731555 25731602 -94552710 - RLTR9A LTR ERVK 0 368 328 3 781 182 37 0 36 chr13 25731602 25731630 -94552682 + (GGGTG)n Simple_repeat Simple_repeat 5 31 0 3 781 610 252 150 65 chr13 25731630 25731921 -94552391 - RLTR9A LTR ERVK -41 327 1 3 781 760 262 50 32 chr13 25731921 25732135 -94552177 + MTD LTR MaLR 180 397 -22 3 781 985 66 12 47 chr13 25732368 25732578 -94551734 + (TCTA)n Simple_repeat Simple_repeat 1 202 0 3 781 3153 60 177 2 chr13 25732579 25733015 -94551297 - RLTR1B LTR ERV1 0 512 1 3 781 298 143 21 32 chr13 25733015 25733082 -94551230 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 3 781 259 352 56 0 chr13 25733365 25733490 -94550822 + MLT1F1 LTR MaLR 10 141 -428 3 781 318 348 86 39 chr13 25733587 25733820 -94550492 - MLT1A0 LTR MaLR -101 264 21 3 781 208 192 135 0 chr13 25734200 25734252 -94550060 - L2a LINE L2 -78 3348 3290 3 781 424 255 51 143 chr13 25734486 25734867 -94549445 - ORR1E LTR MaLR -8 371 1 3 781 25 31 0 0 chr13 25735313 25735345 -94548967 + AT_rich Low_complexity Low_complexity 1 32 0 3 781 221 318 11 11 chr13 25735463 25735505 -94548807 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 781 393 22 0 0 chr13 25735505 25735551 -94548761 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 781 221 318 11 11 chr13 25735551 25735597 -94548715 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 781 341 293 158 29 chr13 25735602 25735848 -94548464 - B4A SINE B4 -14 278 1 3 781 265 290 0 0 chr13 25736326 25736388 -94547924 + (CATATA)n Simple_repeat Simple_repeat 5 66 0 3 781 465 319 122 7 chr13 25736469 25736608 -94547704 - RSINE1 SINE B4 -9 156 2 3 781 5072 203 42 4 chr13 25736632 25737742 -94546570 - Lx2B LINE L1 -6 6994 5842 3 781 4106 179 45 10 chr13 25737743 25738574 -94545738 + Lx2B LINE L1 4982 5841 -45 3 781 737 314 51 18 chr13 25739906 25740237 -94544075 - MER121 Unknown Unknown -50 362 21 3 781 459 284 55 60 chr13 25740953 25741170 -94543142 - Lx9 LINE L1 -486 7158 6943 3 781 20981 149 19 26 chr13 25741212 25741993 -94542319 + L1_Mus3 LINE L1 704 1491 -4392 3 781 2839 38 6 17 chr13 25741993 25742343 -94541969 + ORR1A0 LTR MaLR 1 346 0 3 781 20981 128 10 51 chr13 25742343 25744015 -94540297 + L1_Mus3 LINE L1 1492 3025 -2858 3 781 8308 35 2 1 chr13 25744015 25745009 -94539303 + L1Md_F2 LINE L1 5587 6581 -1 3 781 20981 128 10 51 chr13 25745009 25747028 -94537284 + L1_Mus3 LINE L1 3026 5023 -860 3 781 2104 197 96 13 chr13 25747028 25747485 -94536827 + RLTR26 LTR ERVK 1 495 -147 3 781 2430 49 3 0 chr13 25747520 25747824 -94536488 + MTA_Mm LTR MaLR 92 396 0 3 781 9154 38 1 0 chr13 25747824 25748921 -94535391 + MTA_Mm-int LTR MaLR 1 1098 0 3 781 3285 38 13 0 chr13 25748921 25749312 -94535000 + MTA_Mm LTR MaLR 1 396 0 3 781 700 152 0 0 chr13 25749326 25749438 -94534874 + RLTR26 LTR ERVK 531 642 0 3 781 7190 100 21 1 chr13 25749441 25751032 -94533280 + L1_Mus3 LINE L1 5021 6634 -4 3 781 357 248 73 9 chr13 25751027 25751137 -94533175 - Lx9 LINE L1 -695 6949 6833 3 781 801 244 115 35 chr13 25751287 25751418 -94532894 - Lx9 LINE L1 -1605 6039 5884 3 781 627 60 0 0 chr13 25751418 25751502 -94532810 + (GA)n Simple_repeat Simple_repeat 1 84 0 3 781 1075 165 52 14 chr13 25751502 25751747 -94532565 - Lx9 LINE L1 -1761 5883 5600 3 781 3479 25 2 0 chr13 25752007 25752402 -94531910 + MTA_Mm LTR MaLR 1 396 0 3 781 454 315 84 45 chr13 25753309 25753595 -94530717 - L1MC3 LINE L1 -858 6927 6631 3 781 478 381 54 32 chr13 25753854 25754223 -94530089 - L1MC3 LINE L1 -1507 6278 5902 3 781 1015 257 129 19 chr13 25754302 25754767 -94529545 - L1MC3 LINE L1 -1989 5796 5281 3 781 1372 36 0 0 chr13 25756343 25756511 -94527801 + MT2C_Mm LTR ERVL 1 168 -307 3 781 260 375 42 0 chr13 25757757 25757877 -94526435 + L2b LINE L2 3241 3365 -10 3 781 199 304 18 0 chr13 25758022 25758078 -94526234 - MIRc SINE MIR -28 240 184 3 781 253 303 67 11 chr13 25758224 25758314 -94525998 + MER5A1 DNA MER1_type 42 136 -30 3 781 207 234 44 45 chr13 25758662 25758755 -94525557 + L2b LINE L2 3034 3126 -300 3 781 263 201 71 7 chr13 25759279 25759434 -94524878 + (TA)n Simple_repeat Simple_repeat 2 166 0 3 781 1180 211 88 36 chr13 25759444 25759839 -94524473 - MT2A LTR ERVL -71 462 1 3 781 897 69 0 0 chr13 25760269 25760385 -94523927 + L1_Mus3 LINE L1 6358 6473 -165 3 781 328 356 101 67 chr13 25760542 25760810 -94523502 + L1MEc LINE L1 118 394 -6006 3 781 246 284 0 0 chr13 25761329 25761403 -94522909 + L1MEc LINE L1 1648 1721 -4694 3 781 292 282 16 33 chr13 25762069 25762190 -94522122 + L1MEc LINE L1 3154 3272 -3047 3 781 282 293 13 13 chr13 25762202 25762278 -94522034 + RSINE1 SINE B4 21 96 -69 3 781 366 23 0 0 chr13 25762344 25762387 -94521925 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 781 461 170 9 0 chr13 25762390 25762502 -94521810 + (TAGA)n Simple_repeat Simple_repeat 2 114 0 3 781 321 396 9 0 chr13 25762638 25762744 -94521568 + B1F SINE Alu 24 130 -19 3 781 3996 115 29 34 chr13 25762905 25763561 -94520751 - Lx LINE L1 -3 6651 5999 3 781 520 218 21 21 chr13 25763884 25764029 -94520283 - Lx4A LINE L1 -2 7056 6912 3 781 469 335 98 24 chr13 25764087 25764611 -94519701 + L1MEc LINE L1 4155 4733 -1586 3 781 267 170 0 19 chr13 25764694 25764748 -94519564 + L1MEc LINE L1 4807 4859 -1460 3 781 514 325 174 32 chr13 25764851 25765350 -94518962 + L1MEc LINE L1 5007 5576 -743 3 781 334 264 113 17 chr13 25765514 25765691 -94518621 + L1MEc LINE L1 5797 5990 -361 3 781 285 329 0 14 chr13 25766698 25766769 -94517543 - ID4_ SINE ID -11 72 3 3 781 339 313 106 48 chr13 25767576 25767784 -94516528 + L1M5 LINE L1 5528 5747 -377 3 781 651 230 22 0 chr13 25767838 25767977 -94516335 + B3A SINE B2 2 143 -55 3 781 369 0 0 0 chr13 25767996 25768037 -94516275 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 781 441 0 0 0 chr13 25768037 25768085 -94516227 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 781 519 28 0 40 chr13 25768208 25768271 -94516041 - L1_Mm LINE L1 -3183 2700 2638 3 781 4866 43 0 3 chr13 25768271 25768856 -94515456 + L1Md_F3 LINE L1 5986 6568 -16 3 781 271 203 17 0 chr13 25769494 25769553 -94514759 + RMER15 LTR ERVL 1 60 -515 4 781 1077 276 61 4 chr13 25769701 25769981 -94514331 + RMER15 LTR ERVL 275 570 -5 4 781 965 280 98 9 chr13 25770898 25771226 -94513086 - ORR1D2 LTR MaLR -13 357 1 4 781 426 312 92 22 chr13 25771368 25771622 -94512690 - B4A SINE B4 -22 270 1 4 781 198 0 0 0 chr13 25772873 25772895 -94511417 + (A)n Simple_repeat Simple_repeat 1 22 0 4 781 1078 302 114 0 chr13 25773090 25773563 -94510749 + Lx9 LINE L1 6470 6996 -648 4 781 1263 98 0 0 chr13 25773563 25773859 -94510453 + (CTG)n Simple_repeat Simple_repeat 1 296 0 4 781 755 329 103 58 chr13 25773859 25773889 -94510423 + Lx8 LINE L1 6854 6869 -604 4 781 843 10 0 0 chr13 25773889 25773985 -94510327 + (TTC)n Simple_repeat Simple_repeat 1 96 0 4 781 755 329 103 58 chr13 25773985 25774291 -94510021 + Lx8 LINE L1 6870 7174 -299 4 781 229 297 20 81 chr13 25774354 25774453 -94509859 - LTR48 LTR ERV1 -631 156 64 4 781 294 227 0 0 chr13 25774500 25774575 -94509737 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 781 515 319 89 51 chr13 25775638 25775988 -94508324 + Tigger9b DNA MER2_type 3 365 -259 4 781 256 304 148 0 chr13 25776195 25776330 -94507982 + Tigger9b DNA MER2_type 466 620 -4 4 781 773 298 22 0 chr13 25776975 25777156 -94507156 - ID_B1 SINE B4 -4 220 36 4 781 2786 111 2 24 chr13 25777311 25777488 -94506824 + MTB_Mm LTR MaLR 1 173 -234 4 781 2106 123 35 0 chr13 25777488 25777804 -94506508 - ORR1A2 LTR MaLR 0 327 1 4 781 2786 111 2 24 chr13 25777804 25778042 -94506270 + MTB_Mm LTR MaLR 174 407 0 4 781 827 45 0 0 chr13 25778302 25778412 -94505900 - L1_Mus1 LINE L1 0 6567 6458 4 781 416 226 128 0 chr13 25779556 25779658 -94504654 - ID_B1 SINE B4 -9 215 101 4 781 391 287 83 23 chr13 25781357 25781489 -94502823 + B1_Mur1 SINE Alu 3 142 -7 4 781 292 332 88 29 chr13 25782139 25782378 -94501934 + ORR1D2 LTR MaLR 6 258 -112 4 781 673 294 157 15 chr13 25782395 25782704 -94501608 - MTD LTR MaLR -14 405 47 4 781 701 314 81 0 chr13 25783673 25783896 -94500416 - MER2 DNA MER2_type -1 344 104 4 781 561 15 0 0 chr13 25784020 25784086 -94500226 + (CA)n Simple_repeat Simple_repeat 2 67 0 4 781 281 211 62 9 chr13 25785468 25785684 -94498628 + (TAGA)n Simple_repeat Simple_repeat 1 227 0 4 781 224 292 81 118 chr13 25786269 25786405 -94497907 + L2c LINE L2 3251 3381 -6 4 781 263 348 0 42 chr13 25786477 25786573 -94497739 + PB1D10 SINE Alu 18 109 -8 4 781 24 0 0 0 chr13 25786604 25786628 -94497684 + AT_rich Low_complexity Low_complexity 1 24 0 4 781 450 0 0 0 chr13 25787761 25787811 -94496501 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 781 297 335 114 34 chr13 25788129 25788305 -94496007 - MIRb SINE MIR -62 206 17 4 781 22 35 0 0 chr13 25788900 25788929 -94495383 + AT_rich Low_complexity Low_complexity 1 29 0 4 781 24 85 0 0 chr13 25789330 25789389 -94494923 + AT_rich Low_complexity Low_complexity 1 59 0 4 781 279 333 71 36 chr13 25789499 25789611 -94494701 - PB1D7 SINE Alu 0 120 5 4 781 450 0 0 0 chr13 25790389 25790439 -94493873 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 781 592 295 138 39 chr13 25790498 25790752 -94493560 - B4A SINE B4 -6 286 8 4 781 1321 8 28 0 chr13 25791275 25791526 -94492786 + (TCTA)n Simple_repeat Simple_repeat 1 258 0 4 781 364 280 97 15 chr13 25791553 25791687 -94492625 - RSINE1 SINE B4 -17 148 4 4 781 469 262 0 10 chr13 25791914 25792018 -94492294 - PB1D7 SINE Alu -1 119 17 4 781 954 249 31 31 chr13 25792122 25792408 -94491904 - B4A SINE B4 -3 289 4 4 781 235 283 21 32 chr13 25794322 25794417 -94489895 + CT-rich Low_complexity Low_complexity 3 96 0 4 781 994 32 0 0 chr13 25794592 25794715 -94489597 + B1_Mm SINE Alu 24 146 -1 4 781 273 172 0 0 chr13 25795025 25795089 -94489223 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 781 222 267 0 32 chr13 25796296 25796358 -94487954 + B4 SINE B4 1 60 -232 4 781 221 353 40 65 chr13 25796591 25796715 -94487597 + ID_B1 SINE B4 15 135 -89 4 781 414 0 0 0 chr13 25796896 25796942 -94487370 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 781 726 12 0 0 chr13 25796942 25797024 -94487288 + (CA)n Simple_repeat Simple_repeat 1 83 0 4 781 258 32 0 0 chr13 25799062 25799093 -94485219 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 781 920 302 52 43 chr13 25799285 25799330 -94484982 - MTE2a LTR MaLR 0 379 337 4 781 2030 83 31 16 chr13 25799330 25799647 -94484665 - RLTRETN_Mm LTR ERVK 0 322 1 4 781 920 302 52 43 chr13 25799647 25799929 -94484383 - MTE2a LTR MaLR -43 336 49 4 781 246 159 0 216 chr13 25800643 25800731 -94483581 - RLTR17 LTR ERVK 0 692 624 4 781 2429 159 94 0 chr13 25800819 25801298 -94483014 - Lx LINE L1 -3 6651 6128 4 781 2170 132 47 0 chr13 25801299 25801664 -94482648 + Lx LINE L1 5709 6090 -564 4 781 1830 146 6 38 chr13 25801670 25802011 -94482301 - RLTR31A_Mm LTR ERVK -254 330 1 4 781 628 146 7 44 chr13 25802013 25802149 -94482163 - RMER3D-int LTR ERVK -2 2840 2710 4 781 315 350 64 40 chr13 25802211 25802719 -94481593 - L1MEg LINE L1 -3505 2641 2122 4 781 243 0 0 0 chr13 25802863 25802890 -94481422 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 781 522 257 44 0 chr13 25803079 25803192 -94481120 - B1_Mur1 SINE Alu -13 136 19 4 781 502 174 321 42 chr13 25803578 25803746 -94480566 + B3 SINE B2 2 216 0 4 781 229 242 0 16 chr13 25803901 25803964 -94480348 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 781 496 176 0 0 chr13 25803979 25804070 -94480242 + Lx9 LINE L1 7319 7409 -235 4 781 327 321 60 25 chr13 25804183 25804384 -94479928 - L1MEg LINE L1 -5110 1132 925 4 781 2170 84 9 0 chr13 25804398 25804718 -94479594 - Lx LINE L1 -681 5973 5651 4 781 4360 104 48 19 chr13 25804718 25805385 -94478927 + Lx LINE L1 5964 6649 -5 4 781 563 287 41 72 chr13 25805611 25805806 -94478506 - B3A SINE B2 -5 193 5 4 781 464 212 51 46 chr13 25806063 25806246 -94478066 - Lx4B LINE L1 -5 7053 6872 4 781 1179 40 0 0 chr13 25806733 25806881 -94477431 + L1Md_A LINE L1 6435 6582 0 4 781 235 0 0 0 chr13 25808183 25808218 -94476094 - L1Md_T LINE L1 -1 6581 6547 4 781 483 305 93 82 chr13 25808218 25808475 -94475837 - ORR1E LTR MaLR -65 294 35 4 781 1590 249 9 26 chr13 25808547 25808886 -94475426 - MTD LTR MaLR -86 333 1 4 781 275 200 88 0 chr13 25809219 25809299 -94475013 + L1MC1 LINE L1 4083 4169 -1977 4 781 477 0 0 0 chr13 25809299 25809352 -94474960 + (GGGAA)n Simple_repeat Simple_repeat 3 55 0 4 781 790 313 112 54 chr13 25809383 25809737 -94474575 + L1MC1 LINE L1 4146 4518 -1628 4 781 244 0 56 0 chr13 25809737 25809773 -94474539 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 781 790 313 112 54 chr13 25809773 25809810 -94474502 + L1MC1 LINE L1 4519 4548 -1598 4 781 5893 123 18 34 chr13 25809810 25810408 -94473904 - Lx3A LINE L1 -4 6977 6405 4 781 1437 65 5 11 chr13 25810408 25810594 -94473718 - B2_Mm1t SINE B2 -8 185 1 4 781 5893 123 18 34 chr13 25810594 25810966 -94473346 - Lx3A LINE L1 -577 6404 6023 4 781 882 315 107 52 chr13 25810966 25811939 -94472373 + L1MC1 LINE L1 4549 5582 -751 4 781 546 297 66 9 chr13 25811939 25812150 -94472162 - ID_B1 SINE B4 -1 223 1 4 781 882 323 85 45 chr13 25812150 25812795 -94471517 + L1MC1 LINE L1 5583 6261 -72 4 781 4895 218 72 14 chr13 25812865 25813947 -94470365 + Lx9 LINE L1 6322 7476 -168 4 781 909 0 0 0 chr13 25813947 25814048 -94470264 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 4 781 4895 218 72 14 chr13 25814048 25814215 -94470097 + Lx9 LINE L1 7477 7643 -1 4 781 235 287 22 22 chr13 25814248 25814337 -94469975 + GA-rich Low_complexity Low_complexity 1 89 0 4 781 441 0 0 0 chr13 25815596 25815645 -94468667 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 781 21 0 0 0 chr13 25815695 25815716 -94468596 + AT_rich Low_complexity Low_complexity 1 21 0 4 781 572 287 16 2 chr13 25816570 25816722 -94467590 + B3 SINE B2 9 170 -46 4 781 207 0 0 0 chr13 25817031 25817054 -94467258 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 781 1249 164 111 86 chr13 25817442 25817722 -94466590 + MT2B LTR ERVL 1 287 -314 4 781 569 271 4 43 chr13 25817674 25817929 -94466383 + ORR1B1-int LTR MaLR 718 962 -1001 4 781 1109 155 33 57 chr13 25817925 25818137 -94466175 + ORR1B1 LTR MaLR 185 391 -3 4 781 268 261 159 0 chr13 25818192 25818280 -94466032 - PB1D10 SINE Alu -13 104 3 4 781 240 143 0 0 chr13 25818998 25819040 -94465272 + (TGGGGG)n Simple_repeat Simple_repeat 1 42 0 4 781 198 0 0 0 chr13 25820551 25820573 -94463739 + (T)n Simple_repeat Simple_repeat 1 22 0 4 782 333 0 0 0 chr13 25821713 25821750 -94462562 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 782 369 0 0 0 chr13 25821750 25821790 -94462522 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 782 2075 43 0 0 chr13 25822217 25822470 -94461842 - L1Md_A LINE L1 -3 6579 6327 4 782 888 96 20 0 chr13 25822524 25822670 -94461642 + (TCTCC)n Simple_repeat Simple_repeat 2 150 0 4 782 204 125 0 0 chr13 25822820 25822852 -94461460 + (ACATG)n Simple_repeat Simple_repeat 3 34 0 4 782 21 36 0 0 chr13 25822860 25822888 -94461424 + AT_rich Low_complexity Low_complexity 1 28 0 4 782 707 247 208 8 chr13 25823417 25823682 -94460630 - RLTR28B LTR ERVL -161 320 3 4 782 183 280 12 118 chr13 25823731 25823816 -94460496 + L4 LINE RTE 1055 1130 -899 4 782 1111 93 0 0 chr13 25823979 25824119 -94460193 + B1_Mus1 SINE Alu 1 140 -8 4 782 1211 85 11 0 chr13 25824131 25824308 -94460004 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 4 782 297 0 0 0 chr13 25824308 25824341 -94459971 + (GGAA)n Simple_repeat Simple_repeat 1 33 0 4 782 1232 84 11 0 chr13 25824348 25824526 -94459786 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 782 588 295 13 7 chr13 25824736 25824886 -94459426 + B3A SINE B2 5 155 -43 4 782 648 38 0 0 chr13 25824896 25824975 -94459337 + (TC)n Simple_repeat Simple_repeat 1 79 0 4 782 189 0 0 0 chr13 25824975 25824995 -94459317 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 782 180 0 0 0 chr13 25825111 25825131 -94459181 + (TTTTTA)n Simple_repeat Simple_repeat 4 23 0 4 782 6517 45 7 19 chr13 25825137 25826013 -94458299 - L1Md_F2 LINE L1 -3 6579 5715 4 782 272 265 241 52 chr13 25826559 25826756 -94457556 - MLT1C LTR MaLR -43 347 119 4 782 571 367 89 46 chr13 25827206 25827486 -94456826 + B4A SINE B4 1 292 0 4 782 382 307 16 66 chr13 25827923 25828045 -94456267 - B4 SINE B4 -124 168 53 4 782 419 351 59 47 chr13 25828590 25828826 -94455486 + B4 SINE B4 3 241 -51 5 782 411 106 0 0 chr13 25828869 25828935 -94455377 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 782 701 85 9 0 chr13 25828938 25829044 -94455268 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 5 782 336 24 0 0 chr13 25829709 25829750 -94454562 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 782 248 318 39 31 chr13 25829909 25830039 -94454273 - MIRc SINE MIR -131 137 7 5 782 360 0 0 0 chr13 25830959 25830999 -94453313 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 782 275 49 24 0 chr13 25830999 25831039 -94453273 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 782 1893 302 67 23 chr13 25831134 25831975 -94452337 - Lx8 LINE L1 -219 7254 6377 5 782 218 95 24 0 chr13 25832601 25832643 -94451669 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 782 240 59 0 0 chr13 25832816 25832850 -94451462 + (TCTCTG)n Simple_repeat Simple_repeat 4 37 0 5 782 1226 48 0 0 chr13 25832850 25832996 -94451316 - B1_Mm SINE Alu 0 147 2 5 782 1194 255 71 8 chr13 25833804 25834196 -94450116 + MTD LTR MaLR 1 417 -2 5 782 324 0 0 0 chr13 25834357 25834393 -94449919 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 782 2345 155 39 18 chr13 25834834 25835268 -94449044 - Lx2B LINE L1 0 7000 6558 5 782 1112 272 37 14 chr13 25836356 25836710 -94447602 + ORR1D2 LTR MaLR 5 366 -4 5 782 1936 196 30 0 chr13 25837330 25837697 -94446615 - ORR1C1 LTR MaLR 0 378 1 5 782 441 281 0 0 chr13 25837745 25837841 -94446471 - MTD LTR MaLR -85 334 239 5 782 319 213 44 57 chr13 25838288 25838447 -94445865 + (TAGA)n Simple_repeat Simple_repeat 2 158 0 5 782 251 161 18 0 chr13 25839017 25839073 -94445239 + (TTA)n Simple_repeat Simple_repeat 1 57 0 5 782 410 193 0 23 chr13 25839074 25839249 -94445063 + (TG)n Simple_repeat Simple_repeat 2 172 0 5 782 318 174 9 18 chr13 25839268 25839379 -94444933 + (TG)n Simple_repeat Simple_repeat 2 111 0 5 782 212 154 0 0 chr13 25839398 25839437 -94444875 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 782 248 329 37 31 chr13 25839437 25839600 -94444712 - RSINE1 SINE B4 0 165 2 5 782 295 345 0 17 chr13 25839602 25839720 -94444592 - PB1D10 SINE Alu 0 117 2 5 782 490 281 139 28 chr13 25840544 25840760 -94443552 - RMER15 LTR ERVL -20 555 316 5 782 490 355 121 12 chr13 25841548 25841796 -94442516 - B4A SINE B4 -16 276 2 5 782 387 0 0 0 chr13 25842604 25842647 -94441665 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 782 249 98 82 0 chr13 25844076 25844137 -94440175 + (TATAA)n Simple_repeat Simple_repeat 5 70 0 5 782 2341 172 17 7 chr13 25844624 25845033 -94439279 - MTC LTR MaLR -8 413 1 5 782 28 91 0 0 chr13 25845217 25845294 -94439018 + AT_rich Low_complexity Low_complexity 1 77 0 5 782 740 293 104 32 chr13 25845537 25845942 -94438370 + Charlie7 DNA MER1_type 299 732 -1880 5 782 351 0 0 0 chr13 25846280 25846319 -94437993 + (TC)n Simple_repeat Simple_repeat 1 39 0 5 782 213 94 0 0 chr13 25846319 25846350 -94437962 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 782 183 80 0 0 chr13 25846456 25846481 -94437831 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 5 782 446 248 39 10 chr13 25847732 25847834 -94436478 - ID_B1 SINE B4 -15 209 105 5 782 210 333 136 8 chr13 25847834 25847850 -94436462 - B1_Mus1 SINE Alu -15 133 1 5 782 492 62 0 0 chr13 25847876 25847940 -94436372 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 5 782 214 171 0 0 chr13 25848038 25848073 -94436239 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 782 186 43 0 0 chr13 25848073 25848096 -94436216 + (GA)n Simple_repeat Simple_repeat 1 23 0 5 782 284 267 13 39 chr13 25848484 25848562 -94435750 + ID SINE ID 10 85 -139 5 782 344 22 22 0 chr13 25849280 25849325 -94434987 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 5 782 323 325 0 0 chr13 25849328 25849442 -94434870 - PB1D7 SINE Alu -6 114 1 5 782 269 229 56 14 chr13 25849646 25849717 -94434595 - ORR1D2 LTR MaLR 0 370 297 5 782 362 274 113 0 chr13 25849750 25849856 -94434456 + MTD LTR MaLR 3 120 -299 5 782 561 176 0 62 chr13 25849856 25850032 -94434280 + CT-rich Low_complexity Low_complexity 1 165 0 5 782 903 183 0 0 chr13 25850015 25850190 -94434122 + C-rich Low_complexity Low_complexity 3 177 0 5 782 204 133 64 43 chr13 25850191 25850238 -94434074 + CT-rich Low_complexity Low_complexity 3 50 0 5 782 1196 68 0 0 chr13 25850241 25850387 -94433925 - B1_Mus1 SINE Alu -1 147 2 5 782 1167 257 31 53 chr13 25850387 25850708 -94433604 + MTD LTR MaLR 106 419 0 5 782 732 342 16 36 chr13 25850708 25850963 -94433349 - ORR1D2 LTR MaLR -116 254 6 5 782 3364 39 7 19 chr13 25851125 25851546 -94432766 - L1_Mus1 LINE L1 -1 6566 6151 5 782 206 118 0 0 chr13 25851684 25851718 -94432594 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 5 782 804 211 86 17 chr13 25851722 25851954 -94432358 - Lx7 LINE L1 -2 7694 7447 5 782 39 50 0 0 chr13 25852171 25852231 -94432081 + AT_rich Low_complexity Low_complexity 1 60 0 5 782 270 316 40 12 chr13 25852545 25852798 -94431514 + L1MD LINE L1 2967 3226 -2920 5 782 546 319 88 14 chr13 25852832 25853185 -94431127 + L1M5 LINE L1 3221 3599 -2547 5 782 24 0 0 0 chr13 25853229 25853253 -94431059 + AT_rich Low_complexity Low_complexity 1 24 0 5 782 270 0 0 0 chr13 25853258 25853288 -94431024 + (TC)n Simple_repeat Simple_repeat 2 31 0 5 782 293 309 144 0 chr13 25853315 25853412 -94430900 - B3 SINE B2 -86 130 20 5 782 295 317 83 46 chr13 25853513 25853970 -94430342 + L1M5 LINE L1 3726 4199 -1947 5 782 1000 227 84 15 chr13 25854040 25854313 -94429999 + Lx3C LINE L1 6683 6974 -2 5 782 257 206 0 64 chr13 25855125 25855203 -94429109 + CT-rich Low_complexity Low_complexity 3 75 0 5 782 448 81 0 26 chr13 25855336 25855412 -94428900 + (TC)n Simple_repeat Simple_repeat 2 75 0 5 782 241 212 59 39 chr13 25855883 25855953 -94428359 + ORR1D2 LTR MaLR 184 249 -130 5 782 242 220 0 33 chr13 25855966 25856027 -94428285 + ORR1D2 LTR MaLR 305 363 -7 5 782 507 14 29 0 chr13 25857007 25857077 -94427235 - L1Md_F2 LINE L1 -3 6579 6508 5 782 1417 31 5 111 chr13 25857077 25857294 -94427018 + IAPLTR2b LTR ERVK 134 327 0 5 782 1325 90 8 21 chr13 25857629 25857879 -94426433 - L1Md_F2 LINE L1 -97 6557 6285 5 782 331 267 96 96 chr13 25857946 25858112 -94426200 - B3A SINE B2 -4 194 29 5 782 238 259 157 24 chr13 25858641 25858724 -94425588 + B3 SINE B2 9 102 -114 5 782 180 0 0 0 chr13 25858758 25858778 -94425534 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 782 201 147 0 0 chr13 25858783 25858817 -94425495 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 5 782 472 321 19 6 chr13 25858890 25859050 -94425262 - RSINE1 SINE B4 -3 162 1 5 782 591 27 0 0 chr13 25859339 25859412 -94424900 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 782 330 333 82 34 chr13 25860290 25860379 -94423933 - B4A SINE B4 -18 274 177 5 782 549 0 0 0 chr13 25860379 25860440 -94423872 + (TTTTG)n Simple_repeat Simple_repeat 2 62 0 5 782 330 333 82 34 chr13 25860440 25860496 -94423816 - B4A SINE B4 -116 176 122 5 782 275 286 39 48 chr13 25860511 25860614 -94423698 - ID_B1 SINE B4 -84 140 39 5 782 931 219 88 9 chr13 25860950 25861176 -94423136 + MTD LTR MaLR 176 419 0 5 782 26 0 0 0 chr13 25861216 25861242 -94423070 + AT_rich Low_complexity Low_complexity 1 26 0 5 782 261 204 0 0 chr13 25861260 25861314 -94422998 + Arthur1B DNA Tip100 280 333 -892 5 782 1008 221 115 30 chr13 25861399 25861713 -94422599 + ORR1D2 LTR MaLR 33 370 -4 5 782 1062 58 0 0 chr13 25862093 25862231 -94422081 + (TC)n Simple_repeat Simple_repeat 1 138 0 5 782 519 17 0 0 chr13 25862235 25862295 -94422017 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 782 243 282 35 103 chr13 25863525 25863612 -94420700 + B4 SINE B4 20 100 -192 5 782 198 0 0 0 chr13 25863614 25863636 -94420676 + (CA)n Simple_repeat Simple_repeat 1 22 0 5 782 348 24 0 0 chr13 25863711 25863752 -94420560 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 782 270 0 0 0 chr13 25863752 25863781 -94420531 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 782 8607 4 0 0 chr13 25863825 25864821 -94419491 - L1Md_A LINE L1 0 6582 5587 5 782 180 219 0 0 chr13 25865474 25865515 -94418797 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 782 294 250 54 0 chr13 25865872 25865964 -94418348 - MER2 DNA MER2_type -135 210 114 5 782 415 289 14 34 chr13 25866222 25866369 -94417943 - B1_Mus1 SINE Alu 0 148 5 5 782 282 364 10 66 chr13 25866369 25866418 -94417894 - ID_B1 SINE B4 -1 222 38 5 782 396 336 51 0 chr13 25867930 25868067 -94416245 + RSINE1 SINE B4 7 150 -15 5 782 445 289 20 25 chr13 25868108 25868307 -94416005 - L1MC LINE L1 -2592 3554 3357 5 782 798 169 11 17 chr13 25868444 25868625 -94415687 + CT-rich Low_complexity Low_complexity 1 180 0 5 782 275 228 24 136 chr13 25868744 25868957 -94415355 - L1MCa LINE L1 -3014 3307 3119 5 782 30 59 0 0 chr13 25869081 25869132 -94415180 + AT_rich Low_complexity Low_complexity 1 51 0 5 782 271 181 53 40 chr13 25870438 25870513 -94413799 - RLTR16 LTR ERVK 0 505 430 5 782 2253 166 10 70 chr13 25870510 25870996 -94413316 - RLTR16 LTR ERVK -12 493 37 5 782 325 301 100 87 chr13 25871224 25871453 -94412859 - L1MCa LINE L1 -4857 1651 1420 5 782 493 41 71 20 chr13 25871752 25871851 -94412461 + (CAAAA)n Simple_repeat Simple_repeat 2 105 0 5 782 274 370 65 29 chr13 25873139 25873278 -94411034 - MER21B LTR ERV1 -648 215 72 5 782 337 326 62 14 chr13 25874437 25874583 -94409729 + RMER15 LTR ERVL 383 535 -40 5 782 289 316 34 8 chr13 25875306 25875424 -94408888 - RCHARR1 DNA MER1_type 0 974 854 5 782 402 21 0 0 chr13 25875460 25875507 -94408805 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 782 201 94 0 0 chr13 25875546 25875578 -94408734 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 782 625 342 59 77 chr13 25875679 25875843 -94408469 - MT2A LTR ERVL -144 389 235 5 782 231 114 0 0 chr13 25875843 25875878 -94408434 + (CAG)n Simple_repeat Simple_repeat 1 35 0 6 782 625 342 59 77 chr13 25875878 25876105 -94408207 - MT2A LTR ERVL -299 234 5 5 782 2179 251 76 67 chr13 25876076 25876916 -94407396 - RCHARR1 DNA MER1_type -87 887 40 5 782 391 369 74 65 chr13 25876941 25877373 -94406939 + LTR16A LTR ERVL 3 438 -13 6 782 1083 254 31 67 chr13 25877552 25877891 -94406421 + RMER17A2 LTR ERVK 1 321 -585 6 782 3158 44 0 0 chr13 25877891 25878276 -94406036 - L1Md_T LINE L1 0 6582 6198 6 782 1083 279 108 122 chr13 25878276 25878860 -94405452 + RMER17A2 LTR ERVK 322 914 -44 6 782 768 99 0 0 chr13 25879005 25879116 -94405196 + (CATA)n Simple_repeat Simple_repeat 2 112 0 6 782 6130 225 31 19 chr13 25879128 25880619 -94403693 - Lx7 LINE L1 0 7696 6188 6 782 215 179 26 0 chr13 25882014 25882053 -94402259 + B3A SINE B2 14 53 -145 6 782 2338 201 96 76 chr13 25882281 25882896 -94401416 - RMER20B LTR ERVK 0 627 1 6 782 2232 132 85 37 chr13 25883614 25884024 -94400288 - RLTR23 LTR ERV1 0 430 1 6 782 636 26 0 0 chr13 25884711 25884789 -94399523 + (TCTA)n Simple_repeat Simple_repeat 3 80 0 6 782 632 154 436 0 chr13 25886141 25886297 -94398015 + URR1A DNA MER1_type 3 226 0 6 782 1152 65 0 0 chr13 25887106 25887245 -94397067 - B1_Mus1 SINE Alu -9 139 1 6 782 502 297 65 0 chr13 25887320 25887458 -94396854 - RSINE1 SINE B4 -2 163 17 6 782 262 294 34 22 chr13 25887537 25887639 -94396673 + MIR SINE MIR 69 179 -89 6 782 976 135 0 22 chr13 25888295 25888477 -94395835 + CT-rich Low_complexity Low_complexity 2 179 0 6 782 226 304 79 16 chr13 25889006 25889133 -94395179 - L1M5 LINE L1 -485 5639 5505 6 782 244 305 38 9 chr13 25890836 25890942 -94393370 - L2 LINE L2 -527 2892 2784 6 782 334 314 57 0 chr13 25892289 25892413 -94391899 - ID_B1 SINE B4 -1 223 93 6 782 958 337 62 15 chr13 25892463 25892800 -94391512 - MTEa LTR MaLR -2 377 25 6 782 1438 222 29 6 chr13 25893321 25893661 -94390651 + Lx7 LINE L1 5516 5863 -17 6 782 5831 228 64 25 chr13 25893661 25894994 -94389318 + Lx7 LINE L1 6000 7367 -329 6 782 270 0 0 0 chr13 25894994 25895024 -94389288 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 6 782 5831 228 64 25 chr13 25895024 25895323 -94388989 + Lx7 LINE L1 7368 7696 0 6 782 1328 227 78 18 chr13 25895681 25896076 -94388236 + MTD LTR MaLR 1 419 0 6 782 644 266 12 36 chr13 25896231 25896399 -94387913 - B4 SINE B4 -8 284 121 6 782 3410 68 38 19 chr13 25897001 25897477 -94386835 + L1Md_F2 LINE L1 6095 6579 -3 6 782 254 390 0 0 chr13 25897571 25897653 -94386659 + ID_B1 SINE B4 129 210 -14 6 782 350 307 0 81 chr13 25897761 25897885 -94386427 - MTEa LTR MaLR -265 114 1 6 782 560 289 15 10 chr13 25898346 25898503 -94385809 - ID_B1 SINE B4 -41 251 84 6 782 216 86 0 0 chr13 25899313 25899348 -94384964 + (ATTG)n Simple_repeat Simple_repeat 1 35 0 6 782 328 316 17 8 chr13 25899748 25899866 -94384446 + ID_B1 SINE B4 75 193 -31 6 782 215 312 49 61 chr13 25899898 25899980 -94384332 + ID4_ SINE ID 1 81 -2 6 782 490 311 61 29 chr13 25901129 25901374 -94382938 + MER2 DNA MER2_type 93 345 0 6 782 228 273 70 77 chr13 25901524 25901667 -94382645 - MLT2B5 LTR ERVL -329 272 131 6 782 21 0 0 0 chr13 25901824 25901845 -94382467 + AT_rich Low_complexity Low_complexity 1 21 0 6 782 459 329 77 0 chr13 25901862 25902005 -94382307 - RSINE1 SINE B4 -8 157 4 6 782 549 301 124 19 chr13 25902151 25902361 -94381951 + MTEb LTR MaLR 144 375 -4 6 782 232 336 86 36 chr13 25902852 25902991 -94381321 + MLT1J-int LTR MaLR 38 183 -1204 6 782 21 36 0 0 chr13 25904253 25904281 -94380031 + AT_rich Low_complexity Low_complexity 1 28 0 6 782 25 31 0 0 chr13 25904657 25904689 -94379623 + AT_rich Low_complexity Low_complexity 1 32 0 6 782 1463 238 36 22 chr13 25905464 25905877 -94378435 + MTD LTR MaLR 1 419 0 6 782 819 301 120 11 chr13 25906501 25906860 -94377452 - MER57D LTR ERV1 0 411 14 6 782 405 0 0 0 chr13 25907295 25907340 -94376972 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 782 279 0 0 0 chr13 25907340 25907370 -94376942 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 782 522 124 0 0 chr13 25908302 25908391 -94375921 + (TCCA)n Simple_repeat Simple_repeat 3 91 0 6 782 277 247 155 0 chr13 25910456 25910553 -94373759 - Tigger7 DNA MER2_type -2108 383 272 6 782 191 146 24 0 chr13 25910582 25910623 -94373689 + GA-rich Low_complexity Low_complexity 1 42 0 6 782 525 360 61 0 chr13 25910629 25910843 -94373469 - Tigger7 DNA MER2_type -2239 252 26 6 782 329 116 0 14 chr13 25910988 25911058 -94373254 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 782 24 0 0 0 chr13 25911249 25911273 -94373039 + AT_rich Low_complexity Low_complexity 1 24 0 6 782 5206 152 69 12 chr13 25911277 25912187 -94372125 - Lx4A LINE L1 0 7058 6097 6 782 858 177 42 24 chr13 25912281 25912449 -94371863 + ORR1A1 LTR MaLR 176 346 0 6 782 6141 139 25 11 chr13 25913071 25914621 -94369691 - Lx LINE L1 0 6654 5082 6 782 315 0 0 0 chr13 25914874 25914909 -94369403 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 782 12203 34 0 0 chr13 25915184 25916740 -94367572 + L1_Mm LINE L1 2027 3582 -2301 6 782 597 255 114 12 chr13 25917419 25917586 -94366726 + B3 SINE B2 3 186 -30 6 782 261 0 0 0 chr13 25917586 25917615 -94366697 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 782 347 322 96 36 chr13 25917639 25917858 -94366454 - L1MC1 LINE L1 -385 5948 5717 6 782 200 261 0 0 chr13 25917877 25917923 -94366389 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 782 578 314 39 54 chr13 25917936 25918141 -94366171 - B4 SINE B4 -75 217 16 6 782 392 303 181 5 chr13 25919550 25919749 -94364563 - RMER15 LTR ERVL -16 559 326 6 782 234 206 216 52 chr13 25919893 25919990 -94364322 - RMER15 LTR ERVL -458 117 5 6 782 393 238 0 9 chr13 25920225 25920331 -94363981 + HAL1-2a_MD LINE L1 2365 2469 -555 6 782 307 351 104 42 chr13 25920344 25920585 -94363727 - L1MC4a LINE L1 -264 7618 7363 6 782 392 264 72 10 chr13 25920619 25920826 -94363486 + L1MC4a LINE L1 7657 7876 -6 6 782 314 341 117 43 chr13 25923177 25923459 -94360853 + RMER15 LTR ERVL 257 559 -16 6 782 1707 199 86 0 chr13 25924130 25924491 -94359821 + ORR1B1 LTR MaLR 3 394 0 6 782 469 277 49 26 chr13 25924712 25924826 -94359486 - Lx9 LINE L1 -15 7629 7514 6 782 296 24 24 0 chr13 25924826 25924867 -94359445 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 782 469 277 49 26 chr13 25924867 25925019 -94359293 - Lx9 LINE L1 -131 7513 7357 6 782 519 241 17 33 chr13 25925232 25925352 -94358960 - B3 SINE B2 -5 211 94 6 782 886 118 26 7 chr13 25925729 25925882 -94358430 + URR1A DNA MER1_type 71 226 0 6 782 343 295 48 0 chr13 25926609 25926714 -94357598 - Lx8 LINE L1 -145 7328 7219 6 782 502 338 69 42 chr13 25927122 25927428 -94356884 + MER2 DNA MER2_type 23 336 -9 6 782 2553 91 26 8 chr13 25927970 25928348 -94355964 - L1_Mus3 LINE L1 -1 6637 6253 6 782 182 75 18 70 chr13 25928633 25928690 -94355622 + (TTAAA)n Simple_repeat Simple_repeat 3 56 0 6 782 385 269 12 0 chr13 25928842 25929002 -94355310 + CT-rich Low_complexity Low_complexity 1 162 0 6 782 371 266 13 0 chr13 25929014 25929093 -94355219 - PB1D10 SINE Alu -20 97 18 6 782 421 288 128 8 chr13 25929423 25929556 -94354756 + RSINE1 SINE B4 17 165 0 6 782 694 291 21 47 chr13 25929629 25929820 -94354492 + B3A SINE B2 13 198 0 6 782 3199 40 0 25 chr13 25931974 25932382 -94351930 + RLTR13C2 LTR ERVK 1 398 -410 6 782 6755 97 50 3 chr13 25932530 25933732 -94350580 - L1_Mus4 LINE L1 0 6636 5369 6 782 8479 117 29 2 chr13 25933722 25935933 -94348379 - L1VL4 LINE L1 -1291 2268 1 6 782 234 0 0 0 chr13 25935941 25935967 -94348345 + (T)n Simple_repeat Simple_repeat 1 26 0 6 782 2160 48 4 0 chr13 25937044 25937313 -94346999 + L1Md_F2 LINE L1 6301 6570 -12 6 782 207 175 17 34 chr13 25937526 25937585 -94346727 + (TGAA)n Simple_repeat Simple_repeat 1 58 0 6 782 183 80 0 0 chr13 25937601 25937626 -94346686 + (A)n Simple_repeat Simple_repeat 1 25 0 6 782 292 286 222 57 chr13 25937726 25937974 -94346338 + B4A SINE B4 1 289 -3 6 782 495 300 46 7 chr13 25938088 25938239 -94346073 - RSINE1 SINE B4 -7 158 2 6 782 938 281 43 78 chr13 25938542 25938889 -94345423 + ORR1E LTR MaLR 15 349 -10 6 782 216 0 0 0 chr13 25939081 25939105 -94345207 + (T)n Simple_repeat Simple_repeat 1 24 0 6 782 194 0 39 0 chr13 25940708 25940734 -94343578 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 6 782 22 0 0 0 chr13 25941358 25941380 -94342932 + AT_rich Low_complexity Low_complexity 1 22 0 6 782 2660 47 0 0 chr13 25941491 25941860 -94342452 - L1_Mus1 LINE L1 -646 5921 5553 6 782 4388 53 9 0 chr13 25941860 25942459 -94341853 + L1_Mus1 LINE L1 6007 6567 0 6 782 356 156 62 0 chr13 25942485 25942549 -94341763 + Lx3C LINE L1 6712 6779 -197 6 782 441 0 0 0 chr13 25942574 25942623 -94341689 + (TAA)n Simple_repeat Simple_repeat 2 50 0 6 782 420 158 0 0 chr13 25942872 25942948 -94341364 + GA-rich Low_complexity Low_complexity 3 78 0 6 782 719 250 45 5 chr13 25943342 25943543 -94340769 - B3 SINE B2 -7 209 1 6 782 7120 93 39 3 chr13 25943721 25945374 -94338938 + L1_Mus1 LINE L1 4862 6567 0 6 782 597 272 35 6 chr13 25945455 25945629 -94338683 - B3A SINE B2 -18 180 2 6 782 502 135 45 0 chr13 25945711 25945800 -94338512 - URR1B DNA MER1_type -2 223 131 6 782 462 0 73 0 chr13 25945803 25945871 -94338441 + (TTTTG)n Simple_repeat Simple_repeat 3 75 0 6 782 1105 108 0 0 chr13 25945878 25946026 -94338286 - B1_Mus1 SINE Alu 0 148 1 6 782 592 271 14 0 chr13 25946026 25946166 -94338146 - URR1B DNA MER1_type -82 143 2 6 782 426 322 173 38 chr13 25946387 25946810 -94337502 - MER31A LTR ERV1 0 485 6 6 782 765 135 7 20 chr13 25946850 25947001 -94337311 + CT-rich Low_complexity Low_complexity 3 151 0 7 782 927 270 0 5 chr13 25947003 25947219 -94337093 - B3 SINE B2 -1 215 1 7 782 30 0 0 0 chr13 25947832 25947862 -94336450 + AT_rich Low_complexity Low_complexity 1 30 0 7 782 1116 76 0 0 chr13 25947862 25948006 -94336306 - B1_Mus1 SINE Alu 0 148 5 7 782 3340 33 5 0 chr13 25951167 25951561 -94332751 - MTA_Mm LTR MaLR 0 396 1 7 783 3094 53 5 8 chr13 25952297 25952694 -94331618 + MTA_Mm LTR MaLR 1 396 0 7 783 588 294 59 44 chr13 25952901 25953104 -94331208 - ID_B1 SINE B4 0 224 19 7 783 654 279 11 50 chr13 25953682 25953863 -94330449 - B3A SINE B2 -22 176 3 7 783 363 256 0 47 chr13 25953863 25953944 -94330368 - B1_Mus2 SINE Alu -70 77 1 7 783 22 0 0 0 chr13 25954385 25954407 -94329905 + AT_rich Low_complexity Low_complexity 1 22 0 7 783 380 342 7 0 chr13 25954823 25954972 -94329340 + (TG)n Simple_repeat Simple_repeat 1 150 0 7 783 238 229 10 10 chr13 25954986 25955083 -94329229 + (TATATG)n Simple_repeat Simple_repeat 2 98 0 7 783 243 0 0 0 chr13 25956252 25956279 -94328033 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 783 301 187 7 7 chr13 25956289 25956424 -94327888 + (TCTA)n Simple_repeat Simple_repeat 4 138 0 7 783 369 0 0 0 chr13 25956433 25956474 -94327838 + (TAGA)n Simple_repeat Simple_repeat 1 41 0 7 783 501 335 13 31 chr13 25957640 25957850 -94326462 + ID_B1 SINE B4 3 212 -12 7 783 305 62 21 0 chr13 25957850 25957898 -94326414 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 7 783 501 335 13 31 chr13 25957898 25957912 -94326400 + ID_B1 SINE B4 213 223 -1 7 783 243 171 26 13 chr13 25957962 25958039 -94326273 + (TA)n Simple_repeat Simple_repeat 2 79 0 7 783 1075 80 0 0 chr13 25958201 25958338 -94325974 + B1_Mus2 SINE Alu 1 137 -10 7 783 618 14 0 0 chr13 25958338 25958409 -94325903 + (GA)n Simple_repeat Simple_repeat 2 72 0 7 783 803 329 36 36 chr13 25959788 25960040 -94324272 + B4A SINE B4 41 292 0 7 783 378 0 0 0 chr13 25960218 25960260 -94324052 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 783 185 271 21 0 chr13 25960702 25960750 -94323562 + MIR3 SINE MIR 126 174 -34 7 783 928 0 0 0 chr13 25962293 25962396 -94321916 - L1Md_A LINE L1 -502 6080 5978 7 783 4370 6 0 0 chr13 25962396 25962882 -94321430 + L1Md_A LINE L1 6097 6582 0 7 783 188 338 29 44 chr13 25962915 25962983 -94321329 - MIR SINE MIR -178 84 18 7 783 522 31 0 0 chr13 25963310 25963374 -94320938 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 783 477 318 40 0 chr13 25963375 25963501 -94320811 - RSINE1 SINE B4 -22 143 13 7 783 258 321 26 18 chr13 25964012 25964126 -94320186 + Charlie5 DNA MER1_type 11 125 -2499 7 783 263 26 51 0 chr13 25965057 25965096 -94319216 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 7 783 3388 277 99 14 chr13 25965510 25966599 -94317713 - Lx9 LINE L1 -222 7422 6097 7 783 1645 212 25 25 chr13 25966601 25966968 -94317344 - ORR1B2 LTR MaLR 0 367 1 7 783 288 70 0 0 chr13 25968319 25968362 -94315950 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 7 783 512 273 55 80 chr13 25968682 25968881 -94315431 - B3A SINE B2 -2 196 3 7 783 438 153 0 0 chr13 25968954 25969065 -94315247 + CT-rich Low_complexity Low_complexity 2 112 0 7 783 352 315 29 17 chr13 25969093 25969228 -94315084 - B1F SINE Alu -7 140 8 7 783 332 296 82 22 chr13 25969242 25969377 -94314935 - B1_Mur1 SINE Alu 0 149 7 7 783 442 227 450 0 chr13 25969427 25969460 -94314852 - MTE2b LTR MaLR -2 377 345 7 783 792 66 8 24 chr13 25969460 25969585 -94314727 + L1Md_F2 LINE L1 6460 6582 0 7 783 442 227 450 0 chr13 25969585 25969811 -94314501 - MTE2b LTR MaLR -35 344 3 7 783 2660 246 22 0 chr13 25969918 25970470 -94313842 + Lx6 LINE L1 6893 7456 -4 7 783 24 53 0 0 chr13 25970486 25970524 -94313788 + AT_rich Low_complexity Low_complexity 1 38 0 7 783 23 33 0 0 chr13 25970558 25970588 -94313724 + AT_rich Low_complexity Low_complexity 1 30 0 7 783 279 0 0 0 chr13 25970818 25970849 -94313463 + (TCTTG)n Simple_repeat Simple_repeat 1 31 0 7 783 447 19 0 0 chr13 25970849 25970901 -94313411 + (TTTC)n Simple_repeat Simple_repeat 3 54 0 7 783 1154 63 0 0 chr13 25970903 25971045 -94313267 - B1_Mus1 SINE Alu -6 142 1 7 783 2563 58 0 6 chr13 25971054 25971382 -94312930 - L1_Mus1 LINE L1 0 6567 6242 7 783 389 317 70 75 chr13 25971470 25971801 -94312511 - HAL1 LINE L1 -1543 964 636 7 783 32 26 0 0 chr13 25972161 25972200 -94312112 + AT_rich Low_complexity Low_complexity 1 39 0 7 783 567 262 7 28 chr13 25972432 25972577 -94311735 + RSINE1 SINE B4 16 157 -8 7 783 297 89 0 0 chr13 25972624 25972669 -94311643 + (CAA)n Simple_repeat Simple_repeat 2 46 0 7 783 599 236 201 16 chr13 25973289 25973483 -94310829 - RMER15 LTR ERVL -45 530 301 7 783 390 273 181 35 chr13 25973785 25973956 -94310356 - B3A SINE B2 -1 197 2 7 783 401 282 140 6 chr13 25974410 25974567 -94309745 - MTEa LTR MaLR 0 379 202 7 783 710 228 165 12 chr13 25974693 25974942 -94309370 + RMER1B Other Other 77 363 -703 7 783 2532 237 30 102 chr13 25974949 25975692 -94308620 + RMER1B Other Other 147 835 -231 7 783 6241 88 84 0 chr13 25975684 25976577 -94307735 + L1_Mus3 LINE L1 5667 6634 -4 7 783 1091 181 51 30 chr13 25976579 25976813 -94307499 + RMER1B Other Other 825 1063 -3 7 783 429 319 45 84 chr13 25976813 25976991 -94307321 - MTEa LTR MaLR -163 216 46 7 783 1598 184 51 12 chr13 25977103 25977434 -94306878 - RMER5 LTR ERV1 0 534 191 7 783 5423 60 3 0 chr13 25977449 25978135 -94306177 - L1_Mus1 LINE L1 0 6567 5880 7 783 1402 28 38 32 chr13 25978135 25978320 -94305992 + L1_Mus1 LINE L1 5712 5897 -670 7 783 970 205 19 53 chr13 25978321 25978527 -94305785 - RMER5 LTR ERV1 -335 199 1 7 783 971 74 0 0 chr13 25978637 25978758 -94305554 + L1Md_F2 LINE L1 5465 5585 -298 7 783 7747 67 3 3 chr13 25978759 25979755 -94304557 + L1Md_F2 LINE L1 5587 6582 0 7 783 244 261 14 0 chr13 25980615 25980684 -94303628 - L1M3 LINE L1 -255 5913 5844 7 783 418 91 91 0 chr13 25981100 25981177 -94303135 - L1_Mus3 LINE L1 -3 6635 6552 7 783 1813 78 12 0 chr13 25981178 25981435 -94302877 + L1_Mus2 LINE L1 5388 5648 -918 7 783 1431 229 67 14 chr13 25981761 25982120 -94302192 - MTD LTR MaLR 0 419 42 7 783 541 276 56 72 chr13 25982334 25982514 -94301798 + B3A SINE B2 6 182 -16 7 783 402 255 173 6 chr13 25982593 25982755 -94301557 - L1MA4 LINE L1 -372 5928 5740 7 783 269 247 0 25 chr13 25982764 25982843 -94301469 + L1M4 LINE L1 4978 5054 -1092 7 783 227 289 13 0 chr13 25982897 25982973 -94301339 + L1M2 LINE L1 5086 5162 -981 7 783 302 295 117 31 chr13 25983564 25983760 -94300552 + Lx8 LINE L1 7261 7473 0 7 783 288 53 0 0 chr13 25984985 25985023 -94299289 + (GA)n Simple_repeat Simple_repeat 1 38 0 7 783 189 0 0 0 chr13 25985079 25985100 -94299212 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 7 783 22 0 0 0 chr13 25986408 25986430 -94297882 + AT_rich Low_complexity Low_complexity 1 22 0 7 783 299 52 16 49 chr13 25987167 25987228 -94297084 + (CATATA)n Simple_repeat Simple_repeat 2 60 0 7 783 205 176 0 0 chr13 25987231 25987265 -94297047 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 783 252 0 0 0 chr13 25987309 25987337 -94296975 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 783 23 0 0 0 chr13 25987344 25987367 -94296945 + AT_rich Low_complexity Low_complexity 1 23 0 7 783 536 271 75 17 chr13 25987388 25987561 -94296751 + B3A SINE B2 1 183 -15 7 783 486 61 0 0 chr13 25987873 25987939 -94296373 + (TG)n Simple_repeat Simple_repeat 1 66 0 7 783 703 311 107 52 chr13 25987968 25988239 -94296073 - B4A SINE B4 0 292 7 7 783 22 0 0 0 chr13 25988497 25988519 -94295793 + AT_rich Low_complexity Low_complexity 1 22 0 7 783 425 314 24 28 chr13 25988559 25988717 -94295595 - B3A SINE B2 -36 162 1 7 783 277 68 0 0 chr13 25989097 25989141 -94295171 - B1_Mur4 SINE Alu 0 150 107 7 783 906 288 50 32 chr13 25989503 25989883 -94294429 - MTD LTR MaLR 0 419 33 7 783 433 216 31 31 chr13 25990652 25990781 -94293531 + Lx9 LINE L1 7515 7643 -1 7 783 249 83 0 0 chr13 25991362 25991398 -94292914 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 783 626 85 11 0 chr13 25992565 25992659 -94291653 + (TA)n Simple_repeat Simple_repeat 1 95 0 7 783 239 286 11 32 chr13 25992859 25992953 -94291359 + Lx4B LINE L1 6963 7054 -4 7 783 747 0 0 0 chr13 25993104 25993187 -94291125 + (TC)n Simple_repeat Simple_repeat 2 84 0 7 783 298 333 81 29 chr13 25993315 25993451 -94290861 - B4A SINE B4 -131 161 19 7 783 4019 158 60 19 chr13 25994219 25994991 -94289321 + RLTR40 LTR ERVK 1 803 -14 7 783 884 277 93 58 chr13 25995006 25995558 -94288754 - L1MC3 LINE L1 -180 7605 7027 7 783 602 297 0 57 chr13 25995558 25995751 -94288561 - B3A SINE B2 -16 182 1 7 783 884 277 93 58 chr13 25995751 25995841 -94288471 - L1MC3 LINE L1 -759 7026 6940 7 783 265 293 53 30 chr13 25995984 25996159 -94288153 - L1MC3 LINE L1 -206 6138 5965 7 783 307 326 68 20 chr13 25996789 25997097 -94287215 - L1MC3 LINE L1 -850 5296 4966 7 783 462 168 18 9 chr13 25997117 25997231 -94287081 + (TA)n Simple_repeat Simple_repeat 2 116 0 7 783 620 149 28 0 chr13 25997342 25997483 -94286829 + (TA)n Simple_repeat Simple_repeat 2 146 0 7 783 198 0 0 0 chr13 25997539 25997561 -94286751 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 783 486 0 0 0 chr13 25997561 25997614 -94286698 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 783 324 311 58 64 chr13 25997632 25997958 -94286354 - L1M4 LINE L1 -1222 4924 4601 7 783 478 327 0 41 chr13 25998113 25998285 -94286027 + RSINE1 SINE B4 1 165 0 7 783 23 0 0 0 chr13 25998313 25998336 -94285976 + AT_rich Low_complexity Low_complexity 1 23 0 7 783 308 337 40 0 chr13 25998731 25998832 -94285480 - U6 snRNA snRNA 0 107 3 7 783 320 0 25 0 chr13 25998963 25999003 -94285309 + (TTG)n Simple_repeat Simple_repeat 2 42 0 7 783 2517 60 0 0 chr13 25999140 25999459 -94284853 - L1Md_F2 LINE L1 -12 6570 6252 7 783 331 289 10 0 chr13 25999477 25999574 -94284738 - B3 SINE B2 -106 110 13 8 783 262 180 20 0 chr13 26000172 26000222 -94284090 + L1_Rod LINE L1 3865 3915 -1932 1 783 536 300 76 4 chr13 26000438 26000702 -94283610 + L1M2 LINE L1 4140 4422 -1718 2 783 441 325 48 16 chr13 26000735 26000912 -94283400 - B3 SINE B2 -11 184 1 3 783 431 303 143 18 chr13 26001068 26001236 -94283076 + B3 SINE B2 1 189 -27 4 783 792 273 125 58 chr13 26001245 26001878 -94282434 + L1M2 LINE L1 4624 5312 -831 2 783 333 0 0 0 chr13 26001878 26001915 -94282397 + (TATG)n Simple_repeat Simple_repeat 3 39 0 5 783 207 0 0 0 chr13 26001916 26001939 -94282373 + (CTAG)n Simple_repeat Simple_repeat 2 24 0 6 783 792 248 126 33 chr13 26001939 26002107 -94282205 + L1M2 LINE L1 5313 5488 -812 2 783 275 366 41 0 chr13 26002406 26002578 -94281734 + L1M2 LINE L1 5707 5885 -415 2 783 662 251 53 0 chr13 26003427 26003598 -94280714 - B3 SINE B2 0 216 37 7 783 7578 87 14 3 chr13 26003598 26004725 -94279587 - Lx3_Mus LINE L1 -1051 5958 4821 8 783 2033 122 28 0 chr13 26004724 26005044 -94279268 + Lx3A LINE L1 6029 6357 -624 9 783 363 78 30 30 chr13 26005040 26005106 -94279206 - Lx3A LINE L1 -538 6443 6378 1 783 21 0 0 0 chr13 26006218 26006239 -94278073 + AT_rich Low_complexity Low_complexity 1 21 0 1 783 417 271 119 83 chr13 26006314 26006519 -94277793 - B3A SINE B2 0 216 8 1 783 246 236 18 0 chr13 26007083 26007138 -94277174 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 783 2763 262 10 40 chr13 26007406 26007679 -94276633 + Lx6 LINE L1 6623 6895 -565 1 783 590 64 32 0 chr13 26007679 26007773 -94276539 + (CAGAGA)n Simple_repeat Simple_repeat 6 102 0 1 783 2763 262 10 40 chr13 26007773 26008205 -94276107 + Lx6 LINE L1 6896 7307 -153 1 783 286 267 0 0 chr13 26008305 26008395 -94275917 + Lx7 LINE L1 7591 7680 -16 1 783 6257 259 90 42 chr13 26008450 26011060 -94273252 - Lx7 LINE L1 -417 7279 4534 1 783 207 0 0 0 chr13 26011060 26011083 -94273229 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 783 6257 242 75 48 chr13 26011083 26012058 -94272254 - Lx7 LINE L1 -1347 4533 3540 1 783 487 327 25 25 chr13 26012153 26012357 -94271955 + ID_B1 SINE B4 2 205 -19 1 783 2001 218 27 0 chr13 26012374 26012783 -94271529 - MTC LTR MaLR 0 421 2 2 783 21 0 0 0 chr13 26013285 26013306 -94271006 + AT_rich Low_complexity Low_complexity 1 21 0 2 783 180 235 0 0 chr13 26013852 26013886 -94270426 - L2c LINE L2 -71 3316 3283 2 783 239 295 12 25 chr13 26014009 26014089 -94270223 + (TATG)n Simple_repeat Simple_repeat 4 82 0 2 783 216 0 0 0 chr13 26015335 26015359 -94268953 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 2 783 180 237 0 0 chr13 26015627 26015665 -94268647 - L3 LINE CR1 -3320 1169 1132 2 783 254 305 201 19 chr13 26015707 26015861 -94268451 - B3A SINE B2 -16 182 1 2 783 264 59 0 0 chr13 26015923 26015957 -94268355 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 783 306 0 0 0 chr13 26016992 26017026 -94267286 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 783 453 327 66 51 chr13 26017037 26017107 -94267205 - B4A SINE B4 -14 278 201 2 783 395 338 13 46 chr13 26017107 26017259 -94267053 - B1_Mur1 SINE Alu -1 148 2 3 783 753 43 0 0 chr13 26017268 26017361 -94266951 + (TCTA)n Simple_repeat Simple_repeat 2 94 0 3 783 453 327 66 51 chr13 26017361 26017554 -94266758 - B4A SINE B4 -92 200 1 2 783 2374 121 37 32 chr13 26017630 26018031 -94266281 + RLTR9D LTR ERVK 1 403 0 3 783 1885 62 4 20 chr13 26018896 26019143 -94265169 - L1_Mus1 LINE L1 -8 6559 6317 3 783 959 307 87 30 chr13 26019455 26019986 -94264326 - Lx9 LINE L1 -104 7540 6980 3 783 532 315 112 90 chr13 26020531 26020802 -94263510 + Lx8 LINE L1 7100 7381 -92 3 783 414 39 0 0 chr13 26020802 26020854 -94263458 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 783 532 315 112 90 chr13 26020854 26020948 -94263364 + Lx8 LINE L1 7382 7473 0 3 783 243 0 0 0 chr13 26020950 26020977 -94263335 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 3 783 1035 79 0 0 chr13 26020989 26021128 -94263184 - B1_Mus1 SINE Alu -6 142 4 3 783 465 282 48 55 chr13 26021426 26021591 -94262721 - MLT1C LTR MaLR -14 453 290 3 783 435 63 0 0 chr13 26021881 26021944 -94262368 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 783 453 352 58 37 chr13 26021968 26022157 -94262155 - B4 SINE B4 -8 284 92 4 783 278 278 65 22 chr13 26022198 26022290 -94262022 - RSINE1 SINE B4 -69 96 1 4 783 351 65 0 0 chr13 26023291 26023337 -94260975 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 783 339 25 0 0 chr13 26023337 26023376 -94260936 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 783 381 299 43 65 chr13 26023395 26023674 -94260638 - B4A SINE B4 -16 276 4 4 783 384 97 0 0 chr13 26028194 26028256 -94256056 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 783 300 283 48 29 chr13 26030726 26030896 -94253416 - L1MA4 LINE L1 -195 5961 5791 4 783 273 57 0 0 chr13 26031695 26031730 -94252582 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 783 558 0 0 0 chr13 26031744 26031806 -94252506 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 4 783 346 393 7 7 chr13 26031856 26031992 -94252320 + RSINE1 SINE B4 6 141 -24 5 783 338 297 40 14 chr13 26032392 26032614 -94251698 + L1MD LINE L1 3554 3781 -2365 5 783 523 248 0 116 chr13 26033182 26033328 -94250984 + B1_Mur1 SINE Alu 10 138 -11 5 783 372 295 9 0 chr13 26033771 26033883 -94250429 + L3b LINE CR1 10 122 -360 5 783 435 219 0 87 chr13 26034655 26034770 -94249542 + PB1D7 SINE Alu 10 114 -6 5 783 212 137 20 0 chr13 26034803 26034854 -94249458 + CT-rich Low_complexity Low_complexity 1 52 0 5 783 372 43 0 0 chr13 26037256 26037302 -94247010 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 783 607 346 66 16 chr13 26037364 26037622 -94246690 - B4A SINE B4 -11 281 11 5 783 1675 180 35 19 chr13 26039490 26039863 -94244449 - Lx7 LINE L1 -1671 6025 5647 5 783 1431 75 0 5 chr13 26039902 26040090 -94244222 + B2_Mm2 SINE B2 1 187 -8 5 783 387 0 0 0 chr13 26041029 26041072 -94243240 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 783 493 180 46 69 chr13 26041082 26041213 -94243099 + Lx9 LINE L1 7056 7183 -461 6 783 893 62 0 15 chr13 26041300 26041430 -94242882 + (GGGAGA)n Simple_repeat Simple_repeat 5 132 0 6 783 483 312 153 0 chr13 26041431 26041601 -94242711 + B3 SINE B2 19 214 -2 6 783 184 348 158 34 chr13 26041619 26041765 -94242547 + L2 LINE L2 2875 3038 -381 6 783 29 0 0 0 chr13 26042158 26042187 -94242125 + AT_rich Low_complexity Low_complexity 1 29 0 6 783 327 141 82 0 chr13 26042218 26042303 -94242009 + L1Md_A LINE L1 6489 6580 -2 6 783 859 84 13 31 chr13 26043959 26044118 -94240194 + (TAGA)n Simple_repeat Simple_repeat 3 158 0 6 783 737 337 36 7 chr13 26044167 26044448 -94239864 + B4A SINE B4 2 290 -2 6 783 7016 151 77 118 chr13 26045784 26045993 -94238319 - RLTR21 LTR ERVK -4 1568 1289 6 783 285 89 0 0 chr13 26045993 26046038 -94238274 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 783 7016 151 77 118 chr13 26046038 26047461 -94236851 - RLTR21 LTR ERVK -284 1288 3 6 783 348 257 14 0 chr13 26048107 26048181 -94236131 + ID4_ SINE ID 2 76 -7 7 783 219 232 0 0 chr13 26048197 26048279 -94236033 + GA-rich Low_complexity Low_complexity 2 83 0 7 783 440 307 99 11 chr13 26048353 26048544 -94235768 - B3 SINE B2 -8 208 1 7 783 342 308 65 22 chr13 26049013 26049193 -94235119 - MIRc SINE MIR -20 188 7 7 783 2731 171 50 14 chr13 26051180 26051679 -94232633 + L1_Mur2 LINE L1 529 1045 -6041 7 783 7465 124 35 174 chr13 26051680 26051965 -94232347 + L1_Mur2 LINE L1 1765 2049 -3828 7 783 447 35 0 0 chr13 26051965 26052022 -94232290 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 783 7465 124 35 174 chr13 26052022 26052636 -94231676 + L1_Mur2 LINE L1 2050 2685 -3192 7 783 2095 106 52 12 chr13 26052636 26052961 -94231351 - MTB_Mm LTR MaLR -69 338 1 7 783 7465 124 35 174 chr13 26052961 26053312 -94231000 + L1_Mur2 LINE L1 2686 3051 -2826 7 783 395 34 0 48 chr13 26053312 26053374 -94230938 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 7 783 7465 124 35 174 chr13 26053374 26053843 -94230469 + L1_Mur2 LINE L1 3052 3524 -2353 7 783 7762 68 10 2 chr13 26053852 26055166 -94229146 - L1_Mus2 LINE L1 0 6566 5251 7 783 270 0 0 0 chr13 26055166 26055196 -94229116 + (TA)n Simple_repeat Simple_repeat 2 31 0 8 783 4812 94 25 4 chr13 26055196 26055252 -94229060 - L1_Mus2 LINE L1 -633 5250 5180 7 783 6768 130 69 14 chr13 26055251 26056489 -94227823 + L1_Mur2 LINE L1 3513 4902 -975 7 783 633 188 108 8 chr13 26056489 26056618 -94227694 + RLTR20A2 LTR ERVK 1 142 -436 8 783 1048 136 10 10 chr13 26056622 26056815 -94227497 + Lx4A LINE L1 6865 7057 -1 8 783 324 0 0 0 chr13 26056963 26056999 -94227313 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 783 324 321 97 44 chr13 26057613 26057727 -94226585 + PB1 SINE Alu 3 122 -5 8 783 230 206 0 16 chr13 26058180 26058244 -94226068 + CT-rich Low_complexity Low_complexity 1 63 0 8 783 476 272 21 72 chr13 26058925 26058945 -94225367 - Lx3C LINE L1 -4 7054 7039 8 783 5726 97 0 1 chr13 26058945 26059720 -94224592 - L1_Mus2 LINE L1 -1 6565 5792 8 783 8478 118 14 29 chr13 26059720 26061626 -94222686 - Lx3C LINE L1 -20 7038 5089 8 783 275 362 0 0 chr13 26062807 26062901 -94221411 + (TG)n Simple_repeat Simple_repeat 1 94 0 8 783 1813 216 46 19 chr13 26063065 26063475 -94220837 - MTC LTR MaLR 0 421 1 8 783 474 18 0 0 chr13 26063554 26063609 -94220703 + (TG)n Simple_repeat Simple_repeat 1 55 0 9 783 3796 276 49 39 chr13 26064295 26064493 -94219819 - Lx9 LINE L1 -4 7640 7436 9 783 519 60 0 0 chr13 26064493 26064560 -94219752 + (TA)n Simple_repeat Simple_repeat 2 68 0 9 783 3796 276 49 39 chr13 26064560 26065849 -94218463 - Lx9 LINE L1 -209 7435 6138 9 783 2645 229 38 16 chr13 26065949 26066692 -94217620 + L1_Rod LINE L1 5079 5837 -10 9 783 3673 10 0 0 chr13 26067226 26067638 -94216674 + L1Md_A LINE L1 6169 6580 -2 9 783 1210 257 119 16 chr13 26067692 26068221 -94216091 - L1_Mur3 LINE L1 -1868 4278 3666 9 783 275 282 111 51 chr13 26068209 26068426 -94215886 + L1MA6 LINE L1 6017 6246 -54 9 783 315 269 66 61 chr13 26069647 26069845 -94214467 - Lx8 LINE L1 0 7473 7275 9 783 251 250 30 45 chr13 26069853 26069920 -94214392 - ID SINE ID -154 70 5 9 783 366 138 0 0 chr13 26070979 26071044 -94213268 + Lx2 LINE L1 6930 6994 -3 9 783 371 324 140 27 chr13 26071260 26071482 -94212830 - RMER15 LTR ERVL -43 532 286 1 783 217 187 13 13 chr13 26072208 26072284 -94212028 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 783 1366 243 21 31 chr13 26072687 26073014 -94211298 - ORR1C1 LTR MaLR -8 370 47 1 783 581 272 14 49 chr13 26073241 26073384 -94210928 - RSINE1 SINE B4 0 165 28 1 783 566 337 26 5 chr13 26073418 26073612 -94210700 - ID_B1 SINE B4 -8 216 19 1 783 778 311 78 21 chr13 26073614 26073946 -94210366 - MTE2a LTR MaLR 0 379 29 1 783 251 229 33 0 chr13 26074766 26074827 -94209485 + CT-rich Low_complexity Low_complexity 1 63 0 1 783 886 310 124 82 chr13 26074871 26075192 -94209120 + Tigger6a DNA MER2_type 1 343 -740 1 783 411 130 0 0 chr13 26075192 26075269 -94209043 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 783 886 310 124 82 chr13 26075269 26075888 -94208424 + Tigger6a DNA MER2_type 344 981 -102 1 783 22 0 0 0 chr13 26076279 26076301 -94208011 + AT_rich Low_complexity Low_complexity 1 22 0 1 783 649 313 60 10 chr13 26076591 26076791 -94207521 + ID_B1 SINE B4 3 212 -12 1 783 489 17 0 0 chr13 26077051 26077109 -94207203 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 783 319 356 0 0 chr13 26077393 26077483 -94206829 - ID_B1 SINE B4 -36 188 99 1 783 698 139 69 21 chr13 26077511 26077803 -94206509 + CT-rich Low_complexity Low_complexity 1 306 0 1 783 607 166 13 26 chr13 26077831 26077986 -94206326 + CT-rich Low_complexity Low_complexity 3 155 0 1 783 522 0 0 0 chr13 26077986 26078044 -94206268 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 1 783 314 344 30 67 chr13 26078044 26078178 -94206134 - B1F SINE Alu -16 133 5 1 783 790 297 18 129 chr13 26078421 26078796 -94205516 - MTE2b LTR MaLR -55 364 20 1 783 315 0 0 0 chr13 26080060 26080095 -94204217 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 783 279 0 0 0 chr13 26080095 26080125 -94204187 + (GA)n Simple_repeat Simple_repeat 1 31 0 1 783 284 120 0 20 chr13 26080652 26080703 -94203609 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 1 783 717 28 19 0 chr13 26082524 26082631 -94201681 + L1Md_F3 LINE L1 6475 6583 -1 1 783 695 333 20 78 chr13 26082875 26083168 -94201144 - B4A SINE B4 -2 290 15 1 783 624 27 0 0 chr13 26083194 26083268 -94201044 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 784 436 328 47 34 chr13 26083493 26084023 -94200289 + L1M2 LINE L1 3002 3538 -2605 1 784 183 42 0 0 chr13 26084135 26084159 -94200153 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 784 288 200 0 0 chr13 26085003 26085063 -94199249 + (CATA)n Simple_repeat Simple_repeat 1 60 0 1 784 240 289 0 0 chr13 26085096 26085248 -94199064 + (TA)n Simple_repeat Simple_repeat 2 153 0 1 784 966 285 65 21 chr13 26086816 26087117 -94197195 - Lx5 LINE L1 -11 7047 6720 1 784 443 361 162 27 chr13 26087119 26087526 -94196786 + MLT1G3 LTR MaLR 108 569 -26 1 784 264 91 0 0 chr13 26088950 26088994 -94195318 + (GAAA)n Simple_repeat Simple_repeat 1 44 0 1 784 378 0 0 0 chr13 26089715 26089757 -94194555 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 784 4199 204 57 102 chr13 26089758 26090907 -94193405 + RLTR25A LTR ERVK 6 1103 0 1 784 321 197 0 0 chr13 26090907 26090983 -94193329 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 784 1045 252 83 34 chr13 26091256 26091605 -94192707 - ORR1D2 LTR MaLR -4 366 1 1 784 21 0 0 0 chr13 26091666 26091687 -94192625 + AT_rich Low_complexity Low_complexity 1 21 0 1 784 1654 275 36 112 chr13 26092275 26093428 -94190884 + L1_Rod LINE L1 2075 3139 -2708 1 784 5225 217 51 42 chr13 26093441 26095499 -94188813 + Lx7 LINE L1 4602 6708 -988 1 784 1508 303 76 22 chr13 26095480 26096111 -94188201 + Lx7 LINE L1 6871 7535 -161 1 784 484 279 56 0 chr13 26096136 26096297 -94188015 + L1_Rod LINE L1 4641 4810 -1037 1 784 4370 161 51 34 chr13 26096400 26097287 -94187025 - RLTR13D6 LTR ERVK 0 902 1 1 784 468 0 0 0 chr13 26098139 26098191 -94186121 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 784 2170 96 3 19 chr13 26098738 26099045 -94185267 - L1_Mm LINE L1 -39 5844 5543 1 784 4982 91 21 3 chr13 26099052 26099768 -94184544 - Lx3_Mus LINE L1 0 7009 6281 1 784 410 83 14 0 chr13 26099956 26100028 -94184284 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 784 294 29 0 0 chr13 26100028 26100062 -94184250 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 784 198 0 0 0 chr13 26100438 26100460 -94183852 + (A)n Simple_repeat Simple_repeat 1 22 0 1 784 384 350 54 60 chr13 26100765 26101248 -94183064 - L2 LINE L2 -660 2759 2280 1 784 297 0 0 0 chr13 26101387 26101420 -94182892 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 784 449 319 21 0 chr13 26101485 26101626 -94182686 - B1F SINE Alu -5 144 1 1 784 430 223 9 46 chr13 26102214 26102322 -94181990 - ORR1D1 LTR MaLR -13 361 258 1 784 2607 176 25 6 chr13 26102322 26102803 -94181509 + Lx4B LINE L1 6561 7050 -8 1 784 243 320 0 74 chr13 26103530 26103638 -94180674 + MLT1A LTR MaLR 65 164 -210 1 784 285 128 0 0 chr13 26103639 26103686 -94180626 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 784 240 240 65 16 chr13 26103689 26103812 -94180500 - RMER17A2 LTR ERVK -512 394 266 1 784 432 272 123 0 chr13 26105982 26106096 -94178216 + B3A SINE B2 2 129 -69 1 784 570 234 7 35 chr13 26106245 26106387 -94177925 - Lx6 LINE L1 -62 7398 7261 1 784 505 203 195 38 chr13 26106396 26106555 -94177757 - Lx6 LINE L1 -1407 6053 5870 1 784 760 307 73 60 chr13 26106556 26107087 -94177225 + RLTR4_MM-int LTR ERV1 5021 5558 -2043 1 784 561 268 12 0 chr13 26107991 26108155 -94176157 - L1_Mur3 LINE L1 -1991 3889 3724 1 784 435 244 126 35 chr13 26108155 26108329 -94175983 - L1_Mur3 LINE L1 -3194 2686 2497 1 784 1045 287 107 10 chr13 26108304 26108705 -94175607 + Lx7 LINE L1 6872 7311 -385 1 784 345 47 0 0 chr13 26108743 26108786 -94175526 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 784 27 0 0 0 chr13 26108790 26108817 -94175495 + AT_rich Low_complexity Low_complexity 1 27 0 1 784 668 292 58 33 chr13 26108897 26109226 -94175086 - L1MA4 LINE L1 -400 5900 5564 1 784 1321 130 130 0 chr13 26109475 26109690 -94174622 + Lx LINE L1 6003 6245 -409 1 784 4722 51 5 0 chr13 26109757 26110341 -94173971 + L1Md_F2 LINE L1 5984 6570 -12 1 784 1141 116 25 23 chr13 26110563 26110795 -94173517 - L1_Mus2 LINE L1 -499 6083 5851 1 784 4315 83 2 0 chr13 26110795 26111361 -94172951 + L1_Mus1 LINE L1 6000 6566 -1 1 784 1072 111 0 0 chr13 26111369 26111513 -94172799 + B1_Mus2 SINE Alu 2 145 -2 1 784 270 73 0 0 chr13 26111514 26111555 -94172757 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 1 784 30 0 0 0 chr13 26111555 26111585 -94172727 + AT_rich Low_complexity Low_complexity 1 30 0 1 784 351 0 0 0 chr13 26111646 26111685 -94172627 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 784 185 0 40 0 chr13 26112799 26112824 -94171488 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 784 23 68 0 0 chr13 26112972 26113016 -94171296 + AT_rich Low_complexity Low_complexity 1 44 0 1 784 217 245 0 41 chr13 26113864 26113962 -94170350 + CT-rich Low_complexity Low_complexity 3 96 0 1 784 253 214 40 67 chr13 26115351 26115426 -94168886 + MER2 DNA MER2_type 75 147 -198 1 784 546 146 0 0 chr13 26118706 26118802 -94165510 + (TTTTC)n Simple_repeat Simple_repeat 2 97 0 1 784 1106 70 0 7 chr13 26118825 26118968 -94165344 - B1_Mm SINE Alu -5 142 1 1 784 422 141 74 0 chr13 26119116 26119237 -94165075 + C-rich Low_complexity Low_complexity 1 130 0 1 784 548 319 7 0 chr13 26120079 26120214 -94164098 - ID_B1 SINE B4 -3 221 86 1 784 1409 247 86 11 chr13 26120869 26121036 -94163276 + ORR1C2 LTR MaLR 1 167 -217 1 784 621 27 0 0 chr13 26121036 26121111 -94163201 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 784 1409 247 86 11 chr13 26121111 26121291 -94163021 + ORR1C2 LTR MaLR 168 374 -10 1 784 344 279 149 48 chr13 26121497 26121746 -94162566 + B4A SINE B4 1 274 -18 1 784 253 321 85 0 chr13 26121829 26121935 -94162377 - PB1D9 SINE Alu -4 116 2 1 784 198 118 0 0 chr13 26122739 26122773 -94161539 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 784 2169 117 0 47 chr13 26122816 26123158 -94161154 - ORR1A3 LTR MaLR 0 326 1 1 784 257 336 41 57 chr13 26123274 26123397 -94160915 - MLT2B1 LTR ERVL -258 262 142 1 784 22 0 0 0 chr13 26123702 26123724 -94160588 + AT_rich Low_complexity Low_complexity 1 22 0 1 784 540 0 0 0 chr13 26124283 26124343 -94159969 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 784 187 315 137 30 chr13 26125637 26125768 -94158544 - MIRb SINE MIR -65 203 59 1 784 271 141 0 30 chr13 26127291 26127357 -94156955 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 784 22 0 0 0 chr13 26127677 26127699 -94156613 + AT_rich Low_complexity Low_complexity 1 22 0 1 784 1333 329 97 25 chr13 26127888 26128221 -94156091 - Lx8 LINE L1 -382 7091 6740 1 784 935 213 40 27 chr13 26128221 26128443 -94155869 + URR1B DNA MER1_type 1 225 0 1 784 1333 329 97 25 chr13 26128443 26128801 -94155511 - Lx8 LINE L1 -734 6739 6350 1 784 293 296 25 0 chr13 26129024 26129105 -94155207 - ID_B1 SINE B4 -1 223 141 1 784 237 330 47 37 chr13 26129105 26129131 -94155181 - PB1D9 SINE Alu -1 119 12 1 784 771 327 39 21 chr13 26130801 26131132 -94153180 + Lx8 LINE L1 7120 7456 -17 1 784 243 0 0 0 chr13 26131757 26131784 -94152528 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 784 955 39 31 0 chr13 26132065 26132195 -94152117 + (TTCC)n Simple_repeat Simple_repeat 4 137 0 1 784 841 128 14 0 chr13 26132196 26132344 -94151968 + (TTTC)n Simple_repeat Simple_repeat 1 150 0 1 784 5620 186 79 21 chr13 26132356 26133901 -94150411 - Lx4B LINE L1 -62 6996 5336 1 784 4864 155 22 20 chr13 26133928 26135401 -94148911 + L1VL2 LINE L1 443 1919 -1696 1 784 1400 190 76 53 chr13 26135406 26135903 -94148409 - L1_Mur2 LINE L1 -4510 1367 863 1 784 186 239 28 69 chr13 26136320 26136392 -94147920 - MIR SINE MIR -183 79 11 1 784 411 21 0 0 chr13 26136954 26137002 -94147310 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 784 300 27 0 0 chr13 26137012 26137049 -94147263 + (TTTTG)n Simple_repeat Simple_repeat 5 41 0 2 784 836 315 0 14 chr13 26139181 26139397 -94144915 + ID_B1 SINE B4 9 221 -3 2 784 669 317 70 0 chr13 26140440 26140639 -94143673 + ID_B1 SINE B4 11 223 -1 2 784 38493 5 1 0 chr13 26140644 26146015 -94138297 + L1Md_A LINE L1 208 5586 -297 2 784 8967 4 0 0 chr13 26146015 26147011 -94137301 + L1Md_A LINE L1 5587 6582 0 2 784 23 0 0 0 chr13 26147011 26147034 -94137278 + AT_rich Low_complexity Low_complexity 1 23 0 2 784 244 340 41 0 chr13 26148443 26148540 -94135772 + PB1D7 SINE Alu 13 113 -7 2 784 192 171 0 24 chr13 26148542 26148584 -94135728 + L2c LINE L2 3347 3387 0 2 784 222 281 53 0 chr13 26150825 26150882 -94133430 + L2 LINE L2 424 483 -2936 2 784 231 36 0 0 chr13 26151561 26151589 -94132723 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 2 784 1292 68 6 0 chr13 26151591 26151767 -94132545 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 2 784 850 162 6 6 chr13 26152511 26152691 -94131621 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 784 560 289 58 73 chr13 26152691 26152896 -94131416 - B3 SINE B2 -13 203 2 2 784 211 337 69 59 chr13 26155038 26155139 -94129173 - B1F1 SINE Alu -42 107 6 2 784 423 0 0 0 chr13 26155484 26155531 -94128781 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 784 297 0 0 0 chr13 26155531 26155563 -94128749 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 784 198 0 0 0 chr13 26156385 26156407 -94127905 + (T)n Simple_repeat Simple_repeat 1 22 0 2 784 273 157 0 53 chr13 26156458 26156552 -94127760 + GA-rich Low_complexity Low_complexity 2 90 0 2 784 248 249 53 65 chr13 26157190 26157286 -94127026 - B1F SINE Alu -3 114 11 2 784 252 0 0 0 chr13 26157747 26157775 -94126537 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 784 674 143 0 8 chr13 26159147 26159267 -94125045 + CT-rich Low_complexity Low_complexity 3 121 0 2 784 1125 52 0 0 chr13 26159528 26159683 -94124629 + L1_Mus2 LINE L1 6375 6529 -37 2 784 1743 253 41 83 chr13 26161980 26162617 -94121695 - Lx9 LINE L1 -6 7638 7029 2 784 386 107 58 0 chr13 26162775 26162878 -94121434 + A-rich Low_complexity Low_complexity 2 110 0 2 784 219 36 0 0 chr13 26162894 26162922 -94121390 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 784 204 152 14 70 chr13 26162976 26163047 -94121265 + A-rich Low_complexity Low_complexity 3 69 0 2 784 524 334 59 99 chr13 26163124 26163446 -94120866 + ORR1E LTR MaLR 3 311 -48 2 784 20342 89 11 8 chr13 26163777 26167445 -94116867 + L1Md_F LINE L1 390 4065 -1818 2 784 1778 100 0 19 chr13 26167445 26167710 -94116602 + L1Md_F2 LINE L1 6311 6570 -12 2 784 1389 302 47 7 chr13 26168181 26168584 -94115728 + MTD LTR MaLR 1 419 0 2 784 258 95 0 0 chr13 26169477 26169519 -94114793 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 784 420 386 22 49 chr13 26170439 26170706 -94113606 + B4A SINE B4 33 292 0 2 784 23 78 0 0 chr13 26170765 26170816 -94113496 + AT_rich Low_complexity Low_complexity 1 51 0 2 784 186 43 0 0 chr13 26170866 26170889 -94113423 + (TC)n Simple_repeat Simple_repeat 2 24 0 2 784 681 236 46 33 chr13 26170926 26171079 -94113233 - B3A SINE B2 -39 159 5 2 784 210 37 0 0 chr13 26173631 26173658 -94110654 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 784 198 0 0 0 chr13 26173745 26173767 -94110545 + (TCTG)n Simple_repeat Simple_repeat 1 22 0 2 784 333 0 0 0 chr13 26173771 26173808 -94110504 + (TC)n Simple_repeat Simple_repeat 2 38 0 2 784 441 0 0 0 chr13 26173808 26173856 -94110456 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 784 21 0 0 0 chr13 26174509 26174530 -94109782 + AT_rich Low_complexity Low_complexity 1 21 0 2 784 2826 183 8 17 chr13 26175109 26175627 -94108685 - RLTR21 LTR ERVK -1059 513 1 2 784 234 0 0 0 chr13 26175742 26175768 -94108544 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 784 442 283 223 20 chr13 26177838 26178134 -94106178 + Lx8 LINE L1 6974 7329 -144 2 784 358 289 116 30 chr13 26178202 26178366 -94105946 + HAL1-3A_ME LINE L1 2261 2438 -420 2 784 189 0 0 0 chr13 26178366 26178387 -94105925 + (GGAA)n Simple_repeat Simple_repeat 1 21 0 2 784 231 250 21 0 chr13 26178427 26178475 -94105837 - ID4_ SINE ID -32 51 3 2 784 234 0 0 0 chr13 26180884 26180910 -94103402 + (A)n Simple_repeat Simple_repeat 1 26 0 2 784 261 182 0 0 chr13 26181470 26181525 -94102787 + CT-rich Low_complexity Low_complexity 1 55 0 2 784 210 37 0 0 chr13 26181530 26181557 -94102755 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 784 541 356 106 45 chr13 26181564 26181829 -94102483 - B4A SINE B4 -10 282 2 2 784 324 127 0 0 chr13 26182216 26182271 -94102041 + (TCC)n Simple_repeat Simple_repeat 1 55 0 2 784 395 350 0 8 chr13 26183528 26183649 -94100663 + PB1D7 SINE Alu 1 120 0 2 784 189 335 122 31 chr13 26183956 26184178 -94100134 + L2 LINE L2 2392 2633 -786 2 784 273 283 0 40 chr13 26184699 26184824 -94099488 + CT-rich Low_complexity Low_complexity 3 122 0 2 784 21 0 0 0 chr13 26185103 26185124 -94099188 + AT_rich Low_complexity Low_complexity 1 21 0 2 784 863 87 8 0 chr13 26186160 26186286 -94098026 + (GGAA)n Simple_repeat Simple_repeat 3 129 0 2 784 422 345 84 81 chr13 26186866 26187213 -94097099 + MLT2B4 LTR ERVL 10 357 -199 2 784 744 123 26 0 chr13 26188087 26188201 -94096111 + Lx2B LINE L1 6231 6347 -653 2 784 5655 146 62 4 chr13 26188206 26189122 -94095190 - Lx3B LINE L1 0 6973 6001 2 784 1148 75 6 0 chr13 26189122 26189282 -94095030 + (TTTC)n Simple_repeat Simple_repeat 1 161 0 2 784 5655 146 62 4 chr13 26189282 26189338 -94094974 - Lx3B LINE L1 -973 6000 5945 2 784 232 325 102 30 chr13 26189338 26189700 -94094612 + L1ME1 LINE L1 5551 5938 -241 2 784 8298 39 4 5 chr13 26189811 26191128 -94093184 - L1Md_F2 LINE L1 -1 6581 5267 2 784 325 281 213 8 chr13 26191139 26191261 -94093051 - B3A SINE B2 -47 151 5 2 784 183 80 0 0 chr13 26191828 26191853 -94092459 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 2 784 342 91 0 0 chr13 26191855 26191910 -94092402 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 784 23 0 0 0 chr13 26192411 26192434 -94091878 + AT_rich Low_complexity Low_complexity 1 23 0 2 784 1234 272 42 11 chr13 26192590 26192943 -94091369 - Lx7 LINE L1 -502 7194 6831 2 784 1643 96 385 0 chr13 26193047 26193390 -94090922 + IAPLTR2_Mm LTR ERVK 1 475 0 2 784 22 70 0 0 chr13 26193601 26193644 -94090668 + AT_rich Low_complexity Low_complexity 1 43 0 2 784 1135 204 95 27 chr13 26193695 26194083 -94090229 - Lx9 LINE L1 -1675 5969 5516 2 784 1974 259 138 23 chr13 26194160 26194948 -94089364 - Lx9 LINE L1 -1204 4643 3765 2 784 22 0 0 0 chr13 26194967 26194989 -94089323 + AT_rich Low_complexity Low_complexity 1 22 0 2 784 8626 124 48 12 chr13 26194995 26196731 -94087581 - Lx3B LINE L1 -7 6966 3574 2 784 778 242 64 46 chr13 26196791 26197137 -94087175 - Lx3B LINE L1 -2241 3606 3255 2 784 494 204 9 0 chr13 26197144 26197257 -94087055 + CT-rich Low_complexity Low_complexity 4 117 0 2 784 1225 186 68 3 chr13 26197291 26197598 -94086714 + L1_Mur3 LINE L1 2771 3097 -2780 2 784 8226 41 0 3 chr13 26197636 26198633 -94085679 - L1Md_T LINE L1 -2 6580 5587 2 784 1852 180 0 0 chr13 26198637 26198999 -94085313 + L1_Mur3 LINE L1 3087 3448 -2432 2 784 1762 224 98 48 chr13 26199011 26199630 -94084682 - Lx3B LINE L1 -3093 2754 2105 2 784 708 249 23 23 chr13 26199630 26199844 -94084468 - L1_Mur2 LINE L1 -2871 3006 2793 2 784 2227 261 49 96 chr13 26199841 26200705 -94083607 - Lx3B LINE L1 -6261 1347 525 2 784 405 271 110 123 chr13 26200718 26200937 -94083375 - B3 SINE B2 0 216 1 2 784 1238 286 34 39 chr13 26200944 26201330 -94082982 + MTD LTR MaLR 36 419 0 2 784 408 40 0 0 chr13 26201703 26201753 -94082559 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 784 341 322 102 0 chr13 26202594 26202712 -94081600 + RSINE1 SINE B4 5 134 -31 2 784 457 342 63 36 chr13 26202723 26203108 -94081204 + L1MEg LINE L1 1096 1463 -4779 2 784 471 297 31 0 chr13 26203155 26203283 -94081029 + ID_B1 SINE B4 81 212 -12 2 784 319 321 194 26 chr13 26203291 26203678 -94080634 + L1MEg LINE L1 1513 1964 -4278 2 784 336 319 65 9 chr13 26204568 26204822 -94079490 + L1MEg LINE L1 2521 2800 -3346 2 784 4389 161 53 27 chr13 26205322 26206201 -94078111 - RLTR13D6 LTR ERVK 0 902 1 2 784 2269 120 133 28 chr13 26206236 26206672 -94077640 + RLTR45 LTR ERVK 1 482 0 2 784 4068 99 14 2 chr13 26206938 26207515 -94076797 - Lx3A LINE L1 0 6981 6398 2 784 198 0 0 0 chr13 26208683 26208705 -94075607 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 784 21 36 0 0 chr13 26209948 26209976 -94074336 + AT_rich Low_complexity Low_complexity 1 28 0 2 784 216 0 0 0 chr13 26210192 26210216 -94074096 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 2 784 496 317 78 0 chr13 26210228 26210370 -94073942 - RSINE1 SINE B4 -1 164 12 2 784 470 17 0 17 chr13 26210385 26210445 -94073867 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2 784 266 143 16 0 chr13 26210557 26210620 -94073692 + (TA)n Simple_repeat Simple_repeat 1 64 0 2 784 235 292 0 0 chr13 26210649 26210709 -94073603 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 784 333 0 0 0 chr13 26210709 26210746 -94073566 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 784 235 292 0 0 chr13 26210746 26210757 -94073555 + (TA)n Simple_repeat Simple_repeat 1 11 0 2 784 330 348 28 42 chr13 26210778 26210922 -94073390 - RSINE1 SINE B4 -22 143 2 2 784 576 0 0 0 chr13 26211589 26211653 -94072659 + (TC)n Simple_repeat Simple_repeat 1 64 0 2 784 2116 49 4 0 chr13 26212794 26213060 -94071252 + L1Md_F2 LINE L1 6316 6582 0 2 784 302 325 107 8 chr13 26213122 26213243 -94071069 + MLT1G3 LTR MaLR 444 576 -19 2 784 269 385 31 12 chr13 26213345 26213508 -94070804 - MIR SINE MIR -93 169 4 2 784 316 365 47 0 chr13 26213636 26213784 -94070528 - MIRc SINE MIR -77 191 37 2 784 333 0 0 0 chr13 26214040 26214077 -94070235 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 12 231 263 35 0 chr13 26214345 26214402 -94069910 - L2a LINE L2 -8 3418 3360 3 785 1206 199 118 42 chr13 26214436 26214793 -94069519 + ORR1C2 LTR MaLR 1 384 0 3 785 287 175 0 0 chr13 26214795 26214852 -94069460 + ORR1C2-int LTR MaLR 4 60 -1449 3 785 258 286 26 0 chr13 26215113 26215190 -94069122 - Tigger5 DNA MER2_type -38 2368 2290 3 785 257 344 151 32 chr13 26215245 26215371 -94068941 - Tigger5 DNA MER2_type -2262 144 4 3 785 490 303 78 43 chr13 26215930 26216161 -94068151 + RMER15 LTR ERVL 337 575 0 3 785 3261 192 62 9 chr13 26216434 26217091 -94067221 + RLTR17 LTR ERVK 1 692 0 3 785 1089 270 94 36 chr13 26217953 26218284 -94066028 - ORR1E LTR MaLR -7 352 3 3 785 261 57 0 0 chr13 26218916 26218951 -94065361 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3 785 468 271 13 34 chr13 26218972 26219121 -94065191 + B1F2 SINE Alu 3 148 -1 3 785 273 304 17 78 chr13 26219700 26219873 -94064439 + MIRb SINE MIR 58 228 -40 3 785 202 75 0 70 chr13 26221251 26221261 -94063051 + (TTCC)n Simple_repeat Simple_repeat 3 11 0 3 785 1100 114 6 0 chr13 26221261 26221437 -94062875 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 3 785 202 75 0 70 chr13 26221437 26221469 -94062843 + (TTCC)n Simple_repeat Simple_repeat 4 34 0 3 785 388 208 11 0 chr13 26221490 26221590 -94062722 - L1M2 LINE L1 -539 5761 5661 3 785 1334 169 11 26 chr13 26221596 26221863 -94062449 - Lx LINE L1 -3 6651 6389 3 785 4238 127 6 2 chr13 26221863 26222502 -94061810 + Lx2 LINE L1 6090 6731 -266 3 785 482 304 57 85 chr13 26223332 26223613 -94060699 + B4A SINE B4 1 273 -19 3 785 23 54 0 0 chr13 26223684 26223721 -94060591 + AT_rich Low_complexity Low_complexity 1 37 0 3 785 267 294 78 0 chr13 26224134 26224236 -94060076 + MER2 DNA MER2_type 32 141 -204 3 785 488 319 8 0 chr13 26225254 26225373 -94058939 + B3A SINE B2 1 120 -78 3 785 246 32 0 0 chr13 26225387 26225418 -94058894 + (CAGAGA)n Simple_repeat Simple_repeat 6 36 0 3 785 570 51 0 0 chr13 26225418 26225495 -94058817 + (CA)n Simple_repeat Simple_repeat 2 79 0 3 785 180 200 0 0 chr13 26225759 26225804 -94058508 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 785 515 154 8 8 chr13 26226322 26226440 -94057872 - L1_Mus3 LINE L1 -5 6633 6516 3 785 586 165 19 0 chr13 26226454 26226557 -94057755 + Lx6 LINE L1 6630 6734 -726 3 785 608 191 77 67 chr13 26226573 26226781 -94057531 + RCHARR1 DNA MER1_type 655 864 -110 3 785 1084 190 132 13 chr13 26226820 26227054 -94057258 + ORR1B2 LTR MaLR 1 262 -105 3 785 4488 55 21 0 chr13 26227131 26227696 -94056616 + L1Md_F2 LINE L1 5994 6570 -12 3 785 267 31 0 0 chr13 26227728 26227760 -94056552 + (A)n Simple_repeat Simple_repeat 1 32 0 3 785 27 49 0 0 chr13 26227883 26227924 -94056388 + AT_rich Low_complexity Low_complexity 1 41 0 3 785 1068 219 49 75 chr13 26227931 26228276 -94056036 + Lx7 LINE L1 7360 7695 -1 3 785 403 275 175 35 chr13 26228357 26228500 -94055812 - B3 SINE B2 -52 164 2 3 785 21 0 0 0 chr13 26228795 26228816 -94055496 + AT_rich Low_complexity Low_complexity 1 21 0 3 785 27 87 0 0 chr13 26229611 26229680 -94054632 + AT_rich Low_complexity Low_complexity 1 69 0 3 785 392 296 85 0 chr13 26230227 26230391 -94053921 + ID_B1 SINE B4 2 215 -9 3 785 236 100 0 24 chr13 26230399 26230440 -94053872 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 3 785 258 362 287 14 chr13 26231466 26231609 -94052703 + B3A SINE B2 1 182 -16 3 785 245 292 0 30 chr13 26231985 26232052 -94052260 - ID_B1 SINE B4 0 224 160 3 785 411 237 19 58 chr13 26234507 26234610 -94049702 + RSINE1 SINE B4 67 165 0 3 785 233 157 20 0 chr13 26234610 26234661 -94049651 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 785 185 319 40 96 chr13 26234668 26234793 -94049519 - L4 LINE RTE -1426 603 486 3 785 6778 63 0 21 chr13 26235228 26236128 -94048184 - L1_Mus1 LINE L1 -1 6566 5686 3 785 1126 42 0 0 chr13 26236256 26236398 -94047914 - B1_Mm SINE Alu 0 147 6 3 785 263 288 26 26 chr13 26236916 26237030 -94047282 - Lx7 LINE L1 -18 7678 7565 3 785 735 295 146 28 chr13 26237044 26237470 -94046842 - Lx7 LINE L1 -279 7417 6942 3 785 7984 140 53 2 chr13 26237478 26239393 -94044919 + Lx3C LINE L1 4981 6976 0 3 785 662 231 14 0 chr13 26239423 26239566 -94044746 + B1_Mus1 SINE Alu 3 147 -1 3 785 1075 260 24 14 chr13 26239578 26239871 -94044441 + L1_Mur3 LINE L1 5288 5583 -297 3 785 5275 141 72 2 chr13 26239871 26240800 -94043512 + L1Md_F2 LINE L1 5589 6582 0 3 785 347 106 15 0 chr13 26241153 26241219 -94043093 + (CATA)n Simple_repeat Simple_repeat 2 68 0 3 785 711 321 43 116 chr13 26241808 26242111 -94042201 + B4A SINE B4 12 292 0 3 785 203 128 25 25 chr13 26242126 26242166 -94042146 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 3 785 287 85 21 0 chr13 26242166 26242213 -94042099 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 785 249 33 0 0 chr13 26242213 26242243 -94042069 + (GA)n Simple_repeat Simple_repeat 2 31 0 3 785 984 243 179 20 chr13 26242930 26243232 -94041080 + MTD LTR MaLR 56 405 -14 3 785 472 271 46 27 chr13 26243258 26243458 -94040854 + MTD-int LTR MaLR 5 211 -1159 3 785 1306 287 121 96 chr13 26243458 26243569 -94040743 + MTD-int LTR MaLR 641 677 -581 3 785 432 0 0 0 chr13 26243569 26243617 -94040695 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 3 785 1306 287 121 96 chr13 26243617 26244144 -94040168 + MTD-int LTR MaLR 572 1255 -3 3 785 916 295 45 50 chr13 26244144 26244565 -94039747 + MTD LTR MaLR 1 419 0 3 785 651 306 135 0 chr13 26244745 26244997 -94039315 + B4A SINE B4 1 286 -6 3 785 459 0 0 0 chr13 26245002 26245053 -94039259 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 785 198 0 0 0 chr13 26246423 26246445 -94037867 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 785 581 262 7 54 chr13 26248578 26248727 -94035585 + B1_Mur1 SINE Alu 1 142 -7 3 785 603 286 61 0 chr13 26250066 26250213 -94034099 + B3A SINE B2 1 156 -42 3 785 354 146 0 0 chr13 26250215 26250297 -94034015 + (TC)n Simple_repeat Simple_repeat 1 82 0 3 785 387 0 0 0 chr13 26250304 26250347 -94033965 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 785 557 119 32 21 chr13 26251309 26251320 -94032992 - B1_Mus2 SINE Alu -1 146 136 3 785 287 25 25 0 chr13 26251320 26251360 -94032952 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 785 557 136 41 33 chr13 26251360 26251454 -94032858 - B1_Mus2 SINE Alu -12 135 20 3 785 212 0 36 0 chr13 26252552 26252580 -94031732 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 785 300 27 0 0 chr13 26252588 26252625 -94031687 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 3 785 236 62 0 0 chr13 26252767 26252799 -94031513 + L1_Mur1 LINE L1 5106 5137 -749 3 785 369 356 3 20 chr13 26252778 26252802 -94031510 + Lx3A LINE L1 5097 5119 -1024 3 785 1173 48 7 0 chr13 26252802 26252948 -94031364 + B1_Mm SINE Alu 1 147 0 3 785 9112 119 9 11 chr13 26252948 26254835 -94029477 + Lx3A LINE L1 5120 6979 -2 3 785 348 24 0 0 chr13 26255850 26255891 -94028421 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 785 285 323 136 8 chr13 26256077 26256327 -94027985 + L1MA9 LINE L1 5798 6079 -233 3 785 294 29 0 0 chr13 26256372 26256407 -94027905 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 785 794 277 143 88 chr13 26257392 26257912 -94026400 + Lx9 LINE L1 6972 7473 -171 3 785 339 44 0 0 chr13 26257912 26257957 -94026355 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 785 794 277 143 88 chr13 26257957 26258053 -94026259 + Lx9 LINE L1 7474 7622 -22 3 785 556 276 46 39 chr13 26258268 26258535 -94025777 - ORR1E LTR MaLR 0 379 15 3 785 3231 49 13 0 chr13 26258873 26259264 -94025048 + MTA_Mm LTR MaLR 1 396 0 3 785 1046 244 90 48 chr13 26259668 26260025 -94024287 + RMER13A LTR ERVK 21 392 -468 3 785 309 68 0 0 chr13 26260757 26260801 -94023511 + (TTG)n Simple_repeat Simple_repeat 2 45 0 3 785 319 289 150 50 chr13 26261002 26261202 -94023110 - MLT2B5 LTR ERVL -118 483 264 3 785 3695 143 56 5 chr13 26261537 26262175 -94022137 + Lx2 LINE L1 6327 6997 0 3 785 345 368 45 11 chr13 26262187 26262363 -94021949 + B3A SINE B2 1 182 -16 3 785 293 209 25 19 chr13 26263177 26263338 -94020974 + (TA)n Simple_repeat Simple_repeat 2 163 0 3 785 234 0 0 0 chr13 26264516 26264542 -94019770 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 785 323 348 77 95 chr13 26264701 26264974 -94019338 - B4A SINE B4 -21 271 4 3 785 435 269 153 8 chr13 26264985 26265116 -94019196 - ID_B1 SINE B4 -5 219 70 3 785 553 261 22 0 chr13 26266279 26266417 -94017895 + B1_Mur2 SINE Alu 1 141 -8 3 785 495 33 0 0 chr13 26266417 26266478 -94017834 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 785 327 322 25 25 chr13 26266859 26266977 -94017335 + MTEb LTR MaLR 250 367 -12 3 785 35632 48 19 5 chr13 26267891 26273136 -94011176 + L1Md_A LINE L1 266 5586 -297 3 785 8623 22 0 0 chr13 26273136 26274129 -94010183 + L1Md_A LINE L1 5587 6579 -3 3 785 6459 200 59 14 chr13 26276669 26278604 -94005708 - Lx5 LINE L1 -11 7039 5023 3 785 1037 90 0 53 chr13 26278604 26278756 -94005556 - B1_Mus1 SINE Alu -3 145 2 3 785 4488 177 66 25 chr13 26278756 26278869 -94005443 - Lx5 LINE L1 -855 5022 4900 3 785 5340 90 22 10 chr13 26278873 26279678 -94004634 + RLTR13C2 LTR ERVK 1 983 0 3 785 1405 173 4 11 chr13 26279678 26279959 -94004353 - Lx5 LINE L1 -1031 4846 4568 3 785 1334 164 100 4 chr13 26279963 26280233 -94004079 + L1_Mur2 LINE L1 2217 2512 -3365 3 785 438 147 0 0 chr13 26280233 26280301 -94004011 + Lx2 LINE L1 6596 6663 -334 3 785 941 271 39 51 chr13 26280301 26280558 -94003754 - ORR1D2-int LTR MaLR -266 1104 851 3 785 1317 84 0 0 chr13 26280558 26280834 -94003478 + (TTTC)n Simple_repeat Simple_repeat 1 276 0 3 785 1247 268 185 33 chr13 26280861 26281631 -94002681 - ORR1D2-int LTR MaLR -481 889 4 3 785 667 264 230 32 chr13 26281634 26281943 -94002369 - ORR1D2 LTR MaLR 0 370 1 3 785 548 109 10 19 chr13 26282195 26282298 -94002014 - L1Md_F2 LINE L1 0 6582 6481 3 785 253 290 14 28 chr13 26283058 26283129 -94001183 + PB1D7 SINE Alu 46 115 -5 3 785 243 0 0 0 chr13 26283294 26283321 -94000991 + (A)n Simple_repeat Simple_repeat 1 27 0 3 785 21 0 0 0 chr13 26283786 26283807 -94000505 + AT_rich Low_complexity Low_complexity 1 21 0 3 785 324 120 0 0 chr13 26283849 26283899 -94000413 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 785 30 27 0 0 chr13 26284991 26285028 -93999284 + AT_rich Low_complexity Low_complexity 1 37 0 4 785 951 316 46 27 chr13 26285633 26286000 -93998312 - MTD LTR MaLR -14 405 32 4 785 240 240 83 37 chr13 26286052 26286160 -93998152 - MTD-int LTR MaLR -30 1228 1116 4 785 1863 204 68 40 chr13 26287970 26288516 -93995796 + RLTR31_Mm LTR ERVK 1 561 0 4 785 470 250 35 18 chr13 26288894 26289008 -93995304 + L2a LINE L2 3304 3419 -7 4 785 1577 286 170 74 chr13 26289009 26289978 -93994334 - MTD-int LTR MaLR -187 1071 10 4 785 405 259 68 48 chr13 26289985 26290131 -93994181 + MLT1D LTR MaLR 350 498 -7 4 785 265 234 0 135 chr13 26290191 26290280 -93994032 + B1_Mur4 SINE Alu 61 137 -13 4 785 503 308 124 21 chr13 26290292 26290607 -93993705 - MTD LTR MaLR -14 407 6 4 785 208 135 0 0 chr13 26290682 26290719 -93993593 + (A)n Simple_repeat Simple_repeat 1 37 0 4 785 1900 64 0 16 chr13 26291213 26291468 -93992844 + L1Md_F2 LINE L1 6332 6582 0 4 785 396 0 0 0 chr13 26293299 26293343 -93990969 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 785 260 304 3 35 chr13 26294277 26294413 -93989899 - L1ME1 LINE L1 -34 6145 6011 4 785 240 279 44 0 chr13 26294462 26294530 -93989782 - L1MC LINE L1 -716 5628 5558 4 785 1111 213 4 18 chr13 26294742 26294971 -93989341 + URR1A DNA MER1_type 1 226 0 4 785 229 250 32 32 chr13 26295372 26295467 -93988845 + L1M4 LINE L1 5208 5302 -844 4 785 434 329 89 115 chr13 26295483 26296095 -93988217 + L1ME2 LINE L1 5330 5917 -247 4 785 287 289 0 62 chr13 26296095 26296176 -93988136 - ID4 SINE ID -6 77 2 4 785 434 329 89 115 chr13 26296176 26296391 -93987921 + L1ME2 LINE L1 5918 6136 -28 4 785 468 330 96 29 chr13 26296405 26296614 -93987698 + B4 SINE B4 26 248 -44 4 785 396 120 36 12 chr13 26296643 26296727 -93987585 + Lx3_Mus LINE L1 6916 7001 -8 4 785 219 238 20 200 chr13 26296755 26296855 -93987457 + RSINE1 SINE B4 84 165 0 4 785 3466 90 14 4 chr13 26298743 26299233 -93985079 - RLTR1C LTR ERV1 -8 495 1 4 785 763 269 29 62 chr13 26299422 26299632 -93984680 - B3 SINE B2 -11 205 3 4 785 734 277 57 22 chr13 26299808 26300037 -93984275 - ORR1E LTR MaLR 0 359 123 4 785 503 280 13 53 chr13 26300085 26300236 -93984076 - ORR1E LTR MaLR -209 150 6 4 785 12536 172 15 4 chr13 26300236 26303071 -93981241 + Lx2B LINE L1 3554 6428 -572 4 785 2322 95 0 12 chr13 26303046 26303377 -93980935 + L1_Mus1 LINE L1 6241 6567 0 4 785 467 46 0 30 chr13 26303681 26303748 -93980564 + (TATATG)n Simple_repeat Simple_repeat 3 67 0 4 785 3967 69 2 0 chr13 26303926 26304435 -93979877 - L1_Mus1 LINE L1 -1 6566 6057 4 785 373 42 0 16 chr13 26304436 26304499 -93979813 + L1_Mus1 LINE L1 5997 6062 -520 4 785 476 315 53 39 chr13 26305279 26305487 -93978825 + B3 SINE B2 1 211 -5 4 785 25 0 0 0 chr13 26305918 26305943 -93978369 + AT_rich Low_complexity Low_complexity 1 25 0 4 785 780 336 14 83 chr13 26306115 26306475 -93977837 + MTEb LTR MaLR 37 371 -8 4 785 30 0 0 0 chr13 26306989 26307019 -93977293 + AT_rich Low_complexity Low_complexity 1 30 0 4 785 21 36 0 0 chr13 26308857 26308885 -93975427 + AT_rich Low_complexity Low_complexity 1 28 0 4 785 23 0 0 0 chr13 26310028 26310051 -93974261 + AT_rich Low_complexity Low_complexity 1 23 0 4 785 230 297 15 15 chr13 26310752 26310817 -93973495 - RMER15 LTR ERVL -17 558 494 4 785 1086 96 0 0 chr13 26310855 26311001 -93973311 + B1_Mm SINE Alu 2 147 0 4 785 279 291 47 0 chr13 26311031 26311117 -93973195 + MLT1B LTR MaLR 289 378 -12 4 785 355 287 109 27 chr13 26311416 26311563 -93972749 - MLT1C LTR MaLR -308 159 1 4 785 2249 147 8 8 chr13 26311654 26312039 -93972273 + Lx3B LINE L1 6586 6970 -3 4 785 228 111 0 0 chr13 26312044 26312080 -93972232 + (CAA)n Simple_repeat Simple_repeat 2 37 0 4 785 641 250 16 38 chr13 26312081 26312264 -93972048 + Lx4B LINE L1 6831 7009 -49 4 785 870 122 0 0 chr13 26312294 26312433 -93971879 + (GGGA)n Simple_repeat Simple_repeat 2 140 0 4 785 21 0 0 0 chr13 26313934 26313955 -93970357 + AT_rich Low_complexity Low_complexity 1 21 0 4 785 585 299 100 37 chr13 26314390 26314661 -93969651 + MER2 DNA MER2_type 3 290 -55 4 785 295 222 21 53 chr13 26315051 26315146 -93969166 - Lx7 LINE L1 -1943 5753 5662 4 785 364 199 111 2 chr13 26315171 26315286 -93969026 - Lx7 LINE L1 -676 5480 5321 4 785 1083 258 108 21 chr13 26315285 26315709 -93968603 + Lx7 LINE L1 5712 6172 -1524 4 785 2650 119 25 23 chr13 26315715 26316154 -93968158 + Lx LINE L1 6211 6650 -4 4 785 353 274 44 0 chr13 26316162 26316275 -93968037 + Lx6 LINE L1 7325 7442 -18 4 785 3683 97 56 2 chr13 26316294 26316850 -93967462 - Lx3_Mus LINE L1 -11 6998 6413 4 785 295 385 119 18 chr13 26317372 26317919 -93966393 + L2 LINE L2 1483 2084 -1335 4 785 423 0 0 0 chr13 26318744 26318791 -93965521 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 785 324 0 0 0 chr13 26319231 26319267 -93965045 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 785 387 0 0 0 chr13 26319874 26319917 -93964395 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 785 351 0 0 0 chr13 26320296 26320335 -93963977 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 785 931 166 61 15 chr13 26320873 26321069 -93963243 + Lx3A LINE L1 6768 6972 -9 4 785 198 0 0 0 chr13 26321262 26321284 -93963028 + (A)n Simple_repeat Simple_repeat 1 22 0 4 785 21 0 0 0 chr13 26321341 26321362 -93962950 + AT_rich Low_complexity Low_complexity 1 21 0 4 785 731 278 93 25 chr13 26321533 26321854 -93962458 - Lx7 LINE L1 0 7696 7354 4 785 205 198 23 0 chr13 26321854 26321940 -93962372 + (TA)n Simple_repeat Simple_repeat 1 88 0 4 785 793 297 46 19 chr13 26322000 26322261 -93962051 - Lx7 LINE L1 -369 7327 7060 4 785 225 0 0 0 chr13 26322278 26322303 -93962009 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 785 706 348 23 77 chr13 26322377 26322676 -93961636 + B4A SINE B4 10 292 0 4 785 261 180 0 0 chr13 26322678 26322728 -93961584 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 785 392 292 58 11 chr13 26323372 26323541 -93960771 + MLT1H-int LTR MaLR 361 563 -926 4 785 281 24 49 0 chr13 26323734 26323775 -93960537 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 785 1104 69 14 0 chr13 26323775 26323919 -93960393 - B1_Mur4 SINE Alu -3 147 2 4 785 2276 145 0 3 chr13 26324333 26324678 -93959634 - ORR1A1 LTR MaLR -2 344 1 4 785 3473 59 0 9 chr13 26324813 26325258 -93959054 + L1Md_F2 LINE L1 6130 6570 -12 4 785 1873 275 77 28 chr13 26325713 26326416 -93957896 + RMER19A LTR ERVK 1 737 0 4 785 207 0 0 0 chr13 26327037 26327060 -93957252 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 785 415 300 13 0 chr13 26327130 26327280 -93957032 + (TATATG)n Simple_repeat Simple_repeat 1 152 0 4 785 3741 122 21 67 chr13 26327393 26328165 -93956147 + RMER17A LTR ERVK 1 736 -15 4 785 1066 134 38 27 chr13 26329015 26329199 -93955113 + B2_Mm1t SINE B2 1 186 -7 4 785 29 70 0 0 chr13 26329230 26329287 -93955025 + AT_rich Low_complexity Low_complexity 1 57 0 4 785 180 0 0 0 chr13 26329535 26329555 -93954757 + (TGG)n Simple_repeat Simple_repeat 2 21 0 4 785 901 247 79 4 chr13 26329666 26329906 -93954406 - Lx8 LINE L1 -479 6994 6737 4 785 414 313 22 0 chr13 26330177 26330311 -93954001 - MTD LTR MaLR -3 416 280 4 785 451 290 182 40 chr13 26330344 26330520 -93953792 - MTD LTR MaLR -218 201 1 4 785 534 31 0 0 chr13 26330550 26330614 -93953698 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 785 37313 26 0 1 chr13 26331198 26337871 -93946441 - L1Md_T LINE L1 0 6585 1 4 785 1131 112 15 34 chr13 26338122 26338326 -93945986 + Lx2A LINE L1 6788 6987 -21 4 785 225 94 0 0 chr13 26338326 26338358 -93945954 + (TAA)n Simple_repeat Simple_repeat 2 33 0 4 785 227 294 78 96 chr13 26338439 26338621 -93945691 + L1MC3 LINE L1 7160 7341 -444 4 785 2243 197 68 6 chr13 26338621 26338932 -93945380 + RLTR19 LTR ERVK 1 315 -184 4 785 396 71 0 0 chr13 26338932 26338988 -93945324 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 785 2243 197 68 6 chr13 26338988 26339146 -93945166 + RLTR19 LTR ERVK 316 498 -1 4 785 227 294 78 96 chr13 26339146 26339181 -93945131 + L1MC3 LINE L1 7342 7373 -412 4 785 490 75 25 0 chr13 26340945 26341025 -93943287 + (TCTA)n Simple_repeat Simple_repeat 3 84 0 4 785 294 240 47 14 chr13 26341028 26341176 -93943136 + (TAGA)n Simple_repeat Simple_repeat 4 156 0 4 785 405 0 0 0 chr13 26341186 26341231 -93943081 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 785 21 0 0 0 chr13 26342326 26342347 -93941965 + AT_rich Low_complexity Low_complexity 1 21 0 4 785 22 56 0 0 chr13 26343368 26343404 -93940908 + AT_rich Low_complexity Low_complexity 1 36 0 4 785 366 23 0 0 chr13 26344319 26344362 -93939950 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 785 222 341 21 54 chr13 26344561 26344591 -93939721 - ID_B1 SINE B4 -126 98 9 4 785 264 286 16 0 chr13 26344591 26344654 -93939658 - ID4_ SINE ID -11 72 9 4 98 238 287 161 27 chr13 26345421 26345607 -93938705 - B3 SINE B2 -1 215 5 4 786 276 324 29 0 chr13 26347069 26347208 -93937104 + (CA)n Simple_repeat Simple_repeat 2 144 0 4 786 216 97 0 0 chr13 26347455 26347486 -93936826 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 786 268 0 0 0 chr13 26347550 26347588 -93936724 + L1_Mus2 LINE L1 6529 6566 0 4 786 510 103 0 0 chr13 26348554 26348632 -93935680 + (CA)n Simple_repeat Simple_repeat 2 79 0 4 786 1029 302 105 8 chr13 26348674 26349045 -93935267 + MTD LTR MaLR 13 419 0 4 786 261 57 0 0 chr13 26350626 26350661 -93933651 + (CAAT)n Simple_repeat Simple_repeat 2 36 0 4 786 266 257 54 0 chr13 26350678 26350752 -93933560 + MLT1G1 LTR MaLR 468 545 -34 4 786 300 345 104 4 chr13 26350791 26351070 -93933242 - L1MC4 LINE L1 -1 8041 7735 4 786 363 305 71 58 chr13 26351088 26351314 -93932998 - L1MC4 LINE L1 -200 7682 7454 4 786 579 315 0 0 chr13 26351481 26351627 -93932685 - B1_Mur1 SINE Alu -3 146 1 4 786 227 301 108 6 chr13 26351700 26351867 -93932445 - L1MC4 LINE L1 -894 7148 6965 4 786 380 312 12 78 chr13 26354744 26355110 -93929202 - L1MB8 LINE L1 -124 6056 5706 4 786 557 40 13 0 chr13 26355507 26355583 -93928729 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 786 236 320 50 143 chr13 26355754 26356013 -93928299 + ORR1E LTR MaLR 4 238 -121 5 786 312 315 39 0 chr13 26356653 26356767 -93927545 - B1F SINE Alu -31 118 1 5 786 293 238 0 0 chr13 26357477 26357561 -93926751 + Lx6 LINE L1 7350 7433 -27 5 786 24 53 0 0 chr13 26357606 26357644 -93926668 + AT_rich Low_complexity Low_complexity 1 38 0 5 786 617 210 48 8 chr13 26357700 26357825 -93926487 - B1_Mur1 SINE Alu -3 146 17 5 786 5693 104 2 4 chr13 26358290 26359093 -93925219 + L1_Mus3 LINE L1 5834 6635 -3 5 786 772 322 72 47 chr13 26359214 26359694 -93924618 - L1MB8 LINE L1 -184 5994 5493 5 786 611 60 0 0 chr13 26359694 26359778 -93924534 - L1Md_T LINE L1 -1 6581 6498 5 786 772 322 72 47 chr13 26359778 26359839 -93924473 - L1MB8 LINE L1 -686 5492 5445 5 786 438 20 0 0 chr13 26359839 26359890 -93924422 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 786 772 322 72 47 chr13 26359890 26360064 -93924248 - L1MB8 LINE L1 -734 5444 5260 5 786 933 280 64 17 chr13 26360272 26360570 -93923742 + MTD LTR MaLR 18 329 -90 5 786 360 0 0 0 chr13 26360641 26360681 -93923631 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 786 306 280 53 0 chr13 26360689 26360839 -93923473 - L1MB8 LINE L1 -1010 5136 4979 5 786 767 320 116 27 chr13 26360850 26360961 -93923351 + ORR1D2 LTR MaLR 1 133 -237 5 786 3866 111 21 16 chr13 26360961 26361567 -93922745 + Lx LINE L1 6043 6651 -3 5 786 767 320 116 27 chr13 26361567 26361792 -93922520 + ORR1D2 LTR MaLR 134 366 -4 5 786 405 378 13 7 chr13 26362015 26362164 -93922148 + B3A SINE B2 1 150 -48 5 786 330 262 121 23 chr13 26362297 26362393 -93921919 - L1MB8 LINE L1 -1835 4311 4207 5 786 1222 245 74 22 chr13 26362393 26362756 -93921556 + ORR1C2 LTR MaLR 1 382 -2 5 786 332 198 133 8 chr13 26362756 26362876 -93921436 - L1MB8 LINE L1 -1940 4206 4071 5 786 605 341 23 11 chr13 26363086 26363261 -93921051 - B3A SINE B2 -21 177 1 5 786 553 305 22 54 chr13 26363843 26364158 -93920154 + Lx9 LINE L1 7213 7517 -127 5 786 240 35 0 0 chr13 26364158 26364187 -93920125 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 786 207 0 0 0 chr13 26364187 26364210 -93920102 + (GA)n Simple_repeat Simple_repeat 2 24 0 5 786 516 267 0 8 chr13 26364432 26364549 -93919763 + ID_B1 SINE B4 97 212 -12 5 786 293 186 14 0 chr13 26364568 26364638 -93919674 + GA-rich Low_complexity Low_complexity 2 72 0 5 786 306 331 46 66 chr13 26366080 26366277 -93918035 + ORR1E LTR MaLR 1 193 -166 5 786 764 261 163 41 chr13 26368272 26368664 -93915648 + RMER5 LTR ERV1 53 492 -42 5 786 1693 235 57 8 chr13 26368667 26369064 -93915248 + MTD LTR MaLR 4 405 -14 5 786 187 393 73 21 chr13 26369296 26369530 -93914782 + L2 LINE L2 2740 2985 -434 5 786 291 299 73 1 chr13 26369765 26369891 -93914421 - LTR40b LTR ERVL -26 493 321 5 786 263 129 32 0 chr13 26369985 26370047 -93914265 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 5 786 262 350 30 10 chr13 26370878 26370903 -93913409 - B1F2 SINE Alu -46 103 1 5 786 284 280 0 13 chr13 26370903 26370979 -93913333 - ID_B1 SINE B4 -68 156 82 5 786 30 0 0 0 chr13 26371114 26371144 -93913168 + AT_rich Low_complexity Low_complexity 1 30 0 5 786 308 352 0 27 chr13 26372237 26372348 -93911964 + B1_Mm SINE Alu 40 147 0 5 786 324 120 0 0 chr13 26372940 26372990 -93911322 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 786 522 292 87 93 chr13 26374647 26375002 -93909310 + ORR1E LTR MaLR 1 353 -6 5 786 570 89 10 19 chr13 26376352 26376427 -93907885 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 786 351 0 0 0 chr13 26376427 26376466 -93907846 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 786 207 0 0 0 chr13 26376468 26376491 -93907821 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 5 786 570 89 10 19 chr13 26376491 26376515 -93907797 + (TC)n Simple_repeat Simple_repeat 2 24 0 5 786 294 164 0 0 chr13 26376513 26376568 -93907744 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 5 786 387 246 78 52 chr13 26377206 26377322 -93906990 + RSINE1 SINE B4 3 121 -44 5 786 1130 141 5 0 chr13 26377718 26377910 -93906402 - L1_Mus3 LINE L1 0 6638 6446 5 786 381 241 75 62 chr13 26377919 26378065 -93906247 - MER5A DNA MER1_type -35 154 7 5 786 342 335 44 85 chr13 26378477 26378705 -93905607 + L1ME1 LINE L1 5896 6116 -63 5 786 575 274 71 22 chr13 26378705 26378888 -93905424 + B3A SINE B2 2 193 -5 5 786 342 335 44 85 chr13 26378888 26378953 -93905359 + L1ME1 LINE L1 6117 6177 -2 5 786 5954 85 16 18 chr13 26380066 26380907 -93903405 - L1_Mus3 LINE L1 -56 6582 5744 5 786 6329 141 13 48 chr13 26380912 26382044 -93902268 + L1_Mm LINE L1 4568 5660 -223 5 786 1698 192 3 0 chr13 26382050 26382357 -93901955 - Lx2B LINE L1 -5 6995 6688 5 786 818 74 6 135 chr13 26382357 26382513 -93901799 + Lx2B LINE L1 6542 6677 -323 5 786 3063 199 35 19 chr13 26382837 26383467 -93900845 - RLTR26 LTR ERVK -2 640 1 5 786 279 0 0 0 chr13 26383543 26383574 -93900738 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 786 271 315 32 11 chr13 26383578 26383671 -93900641 + PB1D9 SINE Alu 1 95 -25 5 786 276 130 54 11 chr13 26384535 26384628 -93899684 + (TA)n Simple_repeat Simple_repeat 1 97 0 5 786 2923 91 0 14 chr13 26385045 26385460 -93898852 - L1Md_F2 LINE L1 -2 6580 6172 5 786 4238 140 14 22 chr13 26385498 26386229 -93898083 - Lx3B LINE L1 -6 6967 6243 5 786 1064 109 75 0 chr13 26386229 26386403 -93897909 + Lx3A LINE L1 6047 6233 -748 5 786 726 12 0 0 chr13 26386903 26386986 -93897326 + (GA)n Simple_repeat Simple_repeat 1 83 0 5 786 428 360 92 37 chr13 26387144 26387603 -93896709 + HAL1b LINE L1 902 1385 -624 5 786 2128 114 12 9 chr13 26387625 26387953 -93896359 - L1_Mus4 LINE L1 -4 6632 6304 5 786 22 35 0 0 chr13 26388245 26388274 -93896038 + AT_rich Low_complexity Low_complexity 1 29 0 5 786 693 255 30 54 chr13 26388569 26388692 -93895620 + B3A SINE B2 1 123 -75 5 786 1488 234 191 5 chr13 26388692 26389138 -93895174 + MT2A LTR ERVL 1 529 -4 5 786 693 255 30 54 chr13 26389138 26389217 -93895095 + B3A SINE B2 124 198 0 5 786 26 50 0 0 chr13 26389556 26389596 -93894716 + AT_rich Low_complexity Low_complexity 1 40 0 5 786 488 302 112 54 chr13 26390161 26390420 -93893892 - B4A SINE B4 -16 276 3 5 786 400 311 147 23 chr13 26390795 26391284 -93893028 + L1M3 LINE L1 3707 4256 -1887 5 786 234 348 0 82 chr13 26391468 26391565 -93892747 + ID_B1 SINE B4 82 170 -54 5 786 270 387 30 29 chr13 26391565 26391612 -93892700 + B1F SINE Alu 1 149 0 5 786 376 327 70 6 chr13 26391614 26391943 -93892369 + L1M3 LINE L1 4630 4979 -1164 5 786 864 76 0 8 chr13 26392065 26392184 -93892128 + B1_Mm SINE Alu 29 146 -1 5 786 245 125 18 0 chr13 26392185 26392241 -93892071 + (CAAAAA)n Simple_repeat Simple_repeat 4 60 0 5 786 339 336 46 27 chr13 26392502 26392762 -93891550 + L1MA5 LINE L1 6030 6294 -6 5 786 381 140 53 0 chr13 26393382 26393496 -93890816 + (TATG)n Simple_repeat Simple_repeat 1 120 0 5 786 1724 262 47 2 chr13 26393843 26394244 -93890068 - MTD LTR MaLR 0 419 1 5 786 254 234 116 11 chr13 26394479 26394574 -93889738 - ERVL-E-int LTR ERVL -5500 167 63 5 786 21 0 0 0 chr13 26394912 26394933 -93889379 + AT_rich Low_complexity Low_complexity 1 21 0 5 786 221 410 27 11 chr13 26395169 26395354 -93888958 - MER5A DNA MER1_type -1 188 1 5 786 249 206 9 18 chr13 26396388 26396497 -93887815 + (CA)n Simple_repeat Simple_repeat 2 109 0 5 786 222 267 18 45 chr13 26397001 26397111 -93887201 + (CATA)n Simple_repeat Simple_repeat 2 108 0 5 786 465 19 0 0 chr13 26397129 26397183 -93887129 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 786 443 350 77 0 chr13 26397431 26397574 -93886738 + RSINE1 SINE B4 12 165 0 5 786 395 254 64 89 chr13 26397693 26397873 -93886439 - MLT1B LTR MaLR -24 384 176 5 786 1431 206 37 112 chr13 26399147 26399375 -93884937 - ORR1C2 LTR MaLR 0 384 166 5 786 810 31 0 0 chr13 26399375 26399472 -93884840 + (GA)n Simple_repeat Simple_repeat 2 98 0 5 786 1431 206 37 112 chr13 26399472 26399626 -93884686 - ORR1C2 LTR MaLR -219 165 31 5 786 446 209 10 43 chr13 26399643 26399757 -93884555 - ORR1C2-int LTR MaLR -43 1537 1416 5 786 1939 130 9 51 chr13 26399759 26400091 -93884221 + ORR1A2 LTR MaLR 1 318 -9 5 786 632 191 63 0 chr13 26400090 26400216 -93884096 - ORR1C2-int LTR MaLR -250 1259 1126 5 786 1032 114 0 0 chr13 26400232 26400372 -93883940 + B1_Mus1 SINE Alu 1 140 -8 5 786 1148 75 6 0 chr13 26400374 26400534 -93883778 + (GAAA)n Simple_repeat Simple_repeat 3 163 0 5 786 27 29 0 0 chr13 26400820 26400854 -93883458 + AT_rich Low_complexity Low_complexity 1 34 0 5 786 5718 123 35 30 chr13 26401104 26402051 -93882261 + Lx LINE L1 5723 6654 0 5 786 1573 212 55 36 chr13 26402071 26402433 -93881879 + ORR1C2 LTR MaLR 16 384 0 5 786 2130 229 69 74 chr13 26404127 26405060 -93879252 + RMER17B LTR ERVK 1 908 0 5 786 199 322 90 39 chr13 26405086 26405241 -93879071 + MIR SINE MIR 15 177 -85 5 786 372 22 0 0 chr13 26405582 26405627 -93878685 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 786 2860 67 52 3 chr13 26405627 26406015 -93878297 + RLTR10A LTR ERVK 5 411 0 5 786 318 115 0 0 chr13 26406015 26406076 -93878236 + (TCTG)n Simple_repeat Simple_repeat 2 62 0 5 786 367 203 99 23 chr13 26406460 26406591 -93877721 - L1MA5 LINE L1 -17 6283 6143 5 786 996 283 124 27 chr13 26406628 26406926 -93877386 - MTEa LTR MaLR -8 371 45 5 786 993 226 36 14 chr13 26406926 26407146 -93877166 - URR1B DNA MER1_type 0 225 1 5 786 300 298 128 0 chr13 26407376 26407470 -93876842 - B3A SINE B2 -66 132 27 5 786 304 289 37 28 chr13 26407712 26407819 -93876493 + ID_B1 SINE B4 111 218 -6 5 786 466 316 26 13 chr13 26408253 26408407 -93875905 - MTE2b LTR MaLR 0 379 224 5 786 1032 222 257 23 chr13 26408423 26408902 -93875410 + Lx9 LINE L1 6505 7095 -549 5 786 479 281 169 83 chr13 26408929 26409302 -93875010 - RMER4B LTR ERVK -24 561 157 5 786 693 261 45 38 chr13 26409310 26409597 -93874715 + Lx9 LINE L1 7349 7637 -7 5 786 702 282 33 42 chr13 26409600 26409815 -93874497 - MTE2b LTR MaLR -157 222 10 5 786 185 371 90 0 chr13 26410165 26410254 -93874058 + MIR SINE MIR 33 129 -133 5 786 526 315 41 7 chr13 26411015 26411162 -93873150 - RSINE1 SINE B4 -10 155 4 6 786 21 0 0 0 chr13 26411678 26411699 -93872613 + AT_rich Low_complexity Low_complexity 1 21 0 6 786 673 285 68 20 chr13 26414135 26414386 -93869926 + Lx7 LINE L1 7059 7321 -375 6 786 875 71 24 0 chr13 26414423 26414549 -93869763 + (TTCTC)n Simple_repeat Simple_repeat 4 132 0 6 786 464 219 206 24 chr13 26414753 26414879 -93869433 - B1_Mur4 SINE Alu -1 149 1 6 786 211 185 56 0 chr13 26415133 26415187 -93869125 + CT-rich Low_complexity Low_complexity 2 58 0 6 786 406 346 154 0 chr13 26415202 26415384 -93868928 - B4 SINE B4 -79 213 4 6 786 312 158 0 0 chr13 26417015 26417072 -93867240 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 786 185 366 60 22 chr13 26417079 26417213 -93867099 + L4 LINE RTE 1451 1589 -440 6 786 296 179 13 0 chr13 26417309 26417387 -93866925 + CT-rich Low_complexity Low_complexity 2 80 0 6 786 2806 43 6 3 chr13 26418277 26418627 -93865685 - L1_Mus1 LINE L1 -1 6566 6216 6 786 425 288 72 0 chr13 26418709 26418820 -93865492 + RSINE1 SINE B4 25 143 -22 6 786 204 111 0 0 chr13 26418828 26418864 -93865448 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 786 357 43 0 0 chr13 26419017 26419064 -93865248 + (TTAA)n Simple_repeat Simple_repeat 3 49 0 6 786 19647 108 49 112 chr13 26419072 26420866 -93863446 - Lx3A LINE L1 -13 6968 5112 6 786 755 276 50 0 chr13 26420866 26421047 -93863265 - RLTR26 LTR ERVK -452 190 1 6 786 19647 108 49 112 chr13 26421047 26422616 -93861696 - Lx3A LINE L1 -13 5111 3485 6 786 1033 95 0 51 chr13 26422616 26422627 -93861685 - B1_Mus1 SINE Alu 0 148 140 6 786 269 48 0 45 chr13 26422627 26422671 -93861641 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 786 1033 95 0 51 chr13 26422671 26422815 -93861497 - B1_Mus1 SINE Alu -9 139 1 6 786 19647 104 35 144 chr13 26422815 26423203 -93861109 - Lx3A LINE L1 -2402 3484 3107 6 786 644 64 11 0 chr13 26423203 26423297 -93861015 + (TTC)n Simple_repeat Simple_repeat 3 97 0 6 786 19647 104 35 144 chr13 26423297 26423748 -93860564 - Lx3A LINE L1 -2780 3106 3003 6 786 282 29 0 0 chr13 26423748 26423783 -93860529 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 786 19647 104 35 144 chr13 26423783 26424471 -93859841 - Lx3A LINE L1 -2884 3002 2318 6 786 4033 68 60 6 chr13 26424471 26425002 -93859310 - LTRIS2 LTR ERV1 0 564 5 6 786 19647 104 35 144 chr13 26425002 26425245 -93859067 - Lx3A LINE L1 -3569 2317 2092 6 786 546 16 0 0 chr13 26425245 26425308 -93859004 + (TA)n Simple_repeat Simple_repeat 1 63 0 6 786 1116 68 0 26 chr13 26425336 26425488 -93858824 - B1_Mus1 SINE Alu 0 148 1 6 786 1496 231 57 44 chr13 26425513 26425966 -93858346 - Lx3A LINE L1 -6458 526 68 6 786 1607 37 0 0 chr13 26426040 26426227 -93858085 - B2_Mm1t SINE B2 -5 188 2 6 786 4299 63 0 2 chr13 26426305 26426849 -93857463 + L1Md_F2 LINE L1 5044 5586 -297 6 786 8129 49 1 0 chr13 26426850 26427908 -93856404 + L1Md_F2 LINE L1 5588 6582 0 6 786 439 336 63 17 chr13 26428114 26428462 -93855850 + L1MB5 LINE L1 5809 6172 -2 6 786 21 0 0 0 chr13 26428570 26428591 -93855721 + AT_rich Low_complexity Low_complexity 1 21 0 6 786 230 146 42 0 chr13 26428931 26428979 -93855333 + T-rich Low_complexity Low_complexity 2 51 0 6 786 208 266 128 68 chr13 26429492 26429625 -93854687 - MIRb SINE MIR -65 203 63 6 786 252 385 41 82 chr13 26430289 26430436 -93853876 + B4A SINE B4 1 141 -151 6 786 246 128 0 0 chr13 26430572 26430611 -93853701 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 786 561 314 44 70 chr13 26431727 26432111 -93852201 - MTEa LTR MaLR -2 377 4 6 786 21 36 0 0 chr13 26432112 26432140 -93852172 + AT_rich Low_complexity Low_complexity 1 28 0 6 786 315 0 0 0 chr13 26432416 26432451 -93851861 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 786 507 33 0 0 chr13 26432451 26432511 -93851801 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 786 903 204 11 11 chr13 26434517 26434700 -93849612 + Lx7 LINE L1 6787 6969 -727 6 786 24246 156 14 69 chr13 26434738 26435813 -93848499 + Lx2 LINE L1 600 1602 -4284 6 786 893 163 7 0 chr13 26435813 26435960 -93848352 + B1_Mus1 SINE Alu 1 148 0 6 786 24246 170 15 16 chr13 26435960 26435988 -93848324 + Lx2 LINE L1 1603 1609 -4277 6 786 405 0 0 0 chr13 26435988 26436033 -93848279 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 786 477 0 0 0 chr13 26436033 26436085 -93848227 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 786 24246 170 15 16 chr13 26436085 26436154 -93848158 + Lx2 LINE L1 1610 1675 -4211 6 786 3331 33 5 0 chr13 26436154 26436548 -93847764 - MTA_Mm LTR MaLR 0 396 1 6 786 24246 170 15 16 chr13 26436548 26436789 -93847523 + Lx2 LINE L1 1676 1907 -3979 6 786 351 0 0 0 chr13 26436789 26436828 -93847484 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 6 786 24246 170 15 16 chr13 26436828 26439693 -93844619 + Lx2 LINE L1 1908 4811 -1075 6 786 189 0 0 0 chr13 26439693 26439714 -93844598 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 786 24246 164 23 9 chr13 26439714 26441856 -93842456 + Lx2 LINE L1 4812 6995 -2 6 786 266 250 13 38 chr13 26441862 26441941 -93842371 + Lx7 LINE L1 6990 7066 -630 6 786 306 156 0 0 chr13 26442021 26442085 -93842227 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 786 1604 255 95 25 chr13 26442320 26442842 -93841470 + RMER19C LTR ERVK 14 611 0 6 786 295 389 72 5 chr13 26443439 26443633 -93840679 + ORR1D2 LTR MaLR 11 217 -153 6 786 1045 118 11 0 chr13 26444819 26444997 -93839315 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 786 301 23 0 0 chr13 26445079 26445122 -93839190 + Lx2 LINE L1 6953 6995 -2 6 786 278 198 68 45 chr13 26445142 26445274 -93839038 + L1M4 LINE L1 1169 1303 -5239 6 786 264 21 0 77 chr13 26445535 26445587 -93838725 + (CAAA)n Simple_repeat Simple_repeat 4 51 0 6 786 259 275 0 32 chr13 26445609 26445703 -93838609 + L1M4 LINE L1 1747 1837 -4903 6 786 250 275 82 38 chr13 26445813 26445972 -93838340 + L1MB7 LINE L1 5792 5957 -227 6 786 232 291 24 48 chr13 26446105 26446188 -93838124 - B4A SINE B4 -211 81 1 6 786 216 0 0 0 chr13 26446565 26446589 -93837723 + (T)n Simple_repeat Simple_repeat 1 24 0 6 786 180 0 0 0 chr13 26447510 26447530 -93836782 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 786 617 206 14 0 chr13 26447541 26447687 -93836625 + (TATATG)n Simple_repeat Simple_repeat 6 153 0 6 786 391 299 31 0 chr13 26447690 26447787 -93836525 + PB1D10 SINE Alu 18 117 0 6 786 215 241 12 0 chr13 26449813 26449896 -93834416 + (TA)n Simple_repeat Simple_repeat 2 85 0 6 786 601 285 98 8 chr13 26450566 26450810 -93833502 + Lx7 LINE L1 5906 6171 -1525 6 786 359 267 117 0 chr13 26450955 26451075 -93833237 + B1F2 SINE Alu 11 144 -5 6 786 274 274 0 0 chr13 26451075 26451148 -93833164 + ID4 SINE ID 2 74 -9 6 786 1080 292 20 0 chr13 26451181 26451482 -93832830 - Lx7 LINE L1 -587 7109 6803 6 786 405 241 144 6 chr13 26451634 26451801 -93832511 - B3A SINE B2 -7 191 2 6 786 15091 18 0 1 chr13 26451903 26454383 -93829929 - L1Md_T LINE L1 0 6582 4106 6 786 1727 258 23 7 chr13 26454379 26454816 -93829496 + Lx7 LINE L1 6160 6603 -1093 6 786 22 70 0 0 chr13 26456296 26456339 -93827973 + AT_rich Low_complexity Low_complexity 1 43 0 6 786 21 0 0 0 chr13 26456713 26456734 -93827578 + AT_rich Low_complexity Low_complexity 1 21 0 6 786 268 287 91 48 chr13 26456959 26457124 -93827188 - RMER12 LTR ERVK -441 881 710 6 786 1356 73 47 0 chr13 26457171 26457363 -93826949 - Lx LINE L1 -5 6649 6449 6 786 381 323 0 8 chr13 26457563 26457697 -93826615 + (TG)n Simple_repeat Simple_repeat 2 134 0 6 786 1994 102 64 184 chr13 26457704 26458171 -93826141 + RLTR9F LTR ERVK 1 411 -4 6 786 306 235 0 0 chr13 26458174 26458276 -93826036 + (TATATG)n Simple_repeat Simple_repeat 3 104 0 6 786 527 200 35 6 chr13 26458304 26458475 -93825837 + (TATG)n Simple_repeat Simple_repeat 1 176 0 6 786 361 254 0 24 chr13 26458553 26458722 -93825590 + (TATG)n Simple_repeat Simple_repeat 2 166 0 6 786 286 281 11 0 chr13 26458697 26458841 -93825471 + (TG)n Simple_repeat Simple_repeat 1 146 0 6 786 321 89 0 0 chr13 26458841 26458886 -93825426 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 786 286 281 11 0 chr13 26458886 26458919 -93825393 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 786 2995 15 0 0 chr13 26458986 26459323 -93824989 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 786 56601 18 8 6 chr13 26459323 26465788 -93818524 + IAPEz-int LTR ERVK 8 6481 0 6 786 3007 12 0 0 chr13 26465788 26466125 -93818187 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 786 413 254 6 0 chr13 26466125 26466298 -93818014 + (TG)n Simple_repeat Simple_repeat 2 175 0 6 786 1710 209 28 61 chr13 26468376 26468769 -93815543 - ORR1C2 LTR MaLR -4 380 1 6 786 302 275 113 76 chr13 26469214 26469399 -93814913 - ORR1E LTR MaLR -162 197 6 6 786 1019 113 0 0 chr13 26469614 26469755 -93814557 + B1_Mus1 SINE Alu 2 142 -6 6 786 41 47 0 34 chr13 26470260 26470285 -93814027 + AT_rich Low_complexity Low_complexity 1 25 0 6 786 1186 61 0 0 chr13 26470285 26470433 -93813879 - B1_Mus1 SINE Alu 0 148 1 6 786 41 47 0 34 chr13 26470433 26470495 -93813817 + AT_rich Low_complexity Low_complexity 1 60 0 6 786 922 297 103 33 chr13 26470808 26471180 -93813132 - MTE2a LTR MaLR -14 405 17 6 786 377 333 39 0 chr13 26472144 26472297 -93812015 - RMER15 LTR ERVL -14 561 403 6 786 278 104 0 0 chr13 26472900 26472948 -93811364 + L1_Mus1 LINE L1 6519 6566 -1 6 786 252 0 0 0 chr13 26475065 26475093 -93809219 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 786 2657 73 9 0 chr13 26475370 26475713 -93808599 + ORR1A1 LTR MaLR 1 346 0 6 786 552 163 6 18 chr13 26476349 26476518 -93807794 + (CAGA)n Simple_repeat Simple_repeat 2 168 0 6 787 330 45 0 0 chr13 26476583 26476627 -93807685 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 787 265 262 0 125 chr13 26476794 26476890 -93807422 + PB1D9 SINE Alu 37 120 0 6 787 234 289 0 0 chr13 26477040 26477092 -93807220 - B1F SINE Alu -86 63 12 6 787 212 184 0 20 chr13 26477938 26477988 -93806324 + A-rich Low_complexity Low_complexity 2 50 0 6 787 517 307 131 38 chr13 26478655 26478922 -93805390 + ORR1E LTR MaLR 16 307 -52 6 787 535 318 13 7 chr13 26479029 26479181 -93805131 - RSINE1 SINE B4 0 165 13 6 787 3567 55 4 2 chr13 26481047 26481499 -93802813 + L1_Mus1 LINE L1 6114 6566 -1 6 787 510 61 0 0 chr13 26481808 26481874 -93802438 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 787 505 305 30 0 chr13 26481957 26482088 -93802224 + B1F SINE Alu 10 144 -5 6 787 937 322 58 37 chr13 26483619 26484132 -93800180 - Lx8 LINE L1 -332 7141 6618 6 787 611 260 44 48 chr13 26484443 26484649 -93799663 - B3 SINE B2 0 216 12 6 787 386 246 238 0 chr13 26484995 26485117 -93799195 + MTEa LTR MaLR 1 151 -228 7 787 252 367 35 50 chr13 26486016 26486217 -93798095 + MLT1M LTR MaLR 226 423 -249 7 787 1925 52 16 8 chr13 26488859 26489109 -93795203 - L1Md_F3 LINE L1 -1 6583 6332 7 787 295 260 63 31 chr13 26489434 26489561 -93794751 - MLT1K LTR MaLR 0 595 465 7 787 261 340 9 28 chr13 26490462 26490571 -93793741 + MER103 DNA DNA 8 114 -52 7 787 204 40 0 0 chr13 26490865 26490890 -93793422 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 787 2199 28 0 0 chr13 26491052 26491307 -93793005 + L1Md_F2 LINE L1 5332 5586 -297 7 787 8219 38 1 7 chr13 26491308 26492308 -93792004 + L1Md_F2 LINE L1 5588 6581 -1 7 787 403 296 30 96 chr13 26492404 26492453 -93791859 - B4 SINE B4 -105 187 143 7 787 249 83 0 0 chr13 26492453 26492489 -93791823 + (ATTG)n Simple_repeat Simple_repeat 1 36 0 7 787 427 285 28 44 chr13 26492489 26492637 -93791675 - B4A SINE B4 -149 143 3 7 787 264 250 0 0 chr13 26494156 26494236 -93790076 + (TG)n Simple_repeat Simple_repeat 2 81 0 7 787 238 196 22 0 chr13 26495286 26495332 -93788980 + MTEa LTR MaLR 1 47 -332 7 787 252 255 0 0 chr13 26495710 26495761 -93788551 + B1F2 SINE Alu 10 60 -89 7 787 202 132 26 0 chr13 26495778 26495816 -93788496 + A-rich Low_complexity Low_complexity 5 43 0 7 787 206 146 0 40 chr13 26497122 26497172 -93787140 + (TATG)n Simple_repeat Simple_repeat 1 48 0 7 787 312 228 13 111 chr13 26497242 26497395 -93786917 - HAL1-2a_MD LINE L1 -504 2520 2383 7 787 182 275 122 24 chr13 26497486 26497568 -93786744 - L2a LINE L2 -21 3405 3316 7 787 577 327 54 27 chr13 26497691 26498075 -93786237 - L2a LINE L2 -256 3170 2778 7 787 581 304 26 105 chr13 26498127 26498355 -93785957 + ID_B1 SINE B4 9 218 -6 7 787 274 282 88 65 chr13 26498817 26498948 -93785364 - L1M4 LINE L1 -372 5807 5670 7 787 360 0 0 0 chr13 26498948 26498988 -93785324 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 787 274 282 88 65 chr13 26498988 26499072 -93785240 - L1M4 LINE L1 -510 5669 5587 7 787 407 311 141 33 chr13 26499241 26499540 -93784772 - L1M4 LINE L1 -793 5353 5023 7 787 502 258 75 66 chr13 26500960 26501172 -93783140 + B3 SINE B2 3 216 0 1 787 336 271 0 56 chr13 26501646 26501736 -93782576 - PB1D10 SINE Alu -10 107 23 2 787 350 320 37 45 chr13 26501832 26501966 -93782346 + RSINE1 SINE B4 7 139 -26 3 787 321 309 55 0 chr13 26502012 26502122 -93782190 + RLTR16 LTR ERVK 159 274 -231 4 787 978 79 43 0 chr13 26502948 26503087 -93781225 + B1_Mus1 SINE Alu 1 145 -3 5 787 519 17 0 0 chr13 26503087 26503147 -93781165 + (GA)n Simple_repeat Simple_repeat 2 61 0 6 787 6798 78 16 10 chr13 26503265 26504504 -93779808 - L1_Mus2 LINE L1 0 6566 5399 7 787 412 149 0 0 chr13 26504500 26504567 -93779745 + L1_Mus2 LINE L1 5318 5384 -499 7 787 600 14 0 0 chr13 26505427 26505496 -93778816 + (TG)n Simple_repeat Simple_repeat 2 70 0 8 787 560 294 120 8 chr13 26505531 26505781 -93778531 - B4A SINE B4 -14 278 1 9 787 1363 284 41 25 chr13 26506409 26506896 -93777416 - RMER5 LTR ERV1 0 534 40 1 787 327 49 0 0 chr13 26506968 26507009 -93777303 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1 787 2616 34 15 27 chr13 26507639 26507970 -93776342 - IAPLTR2b LTR ERVK 0 327 1 1 787 471 35 0 0 chr13 26508309 26508366 -93775946 + (GAAA)n Simple_repeat Simple_repeat 4 60 0 1 787 229 145 16 16 chr13 26508383 26508446 -93775866 + A-rich Low_complexity Low_complexity 3 65 0 1 787 697 279 53 39 chr13 26509820 26510103 -93774209 - MamRep434 DNA TcMar -56 370 84 1 787 5478 92 5 1 chr13 26510475 26511227 -93773085 + L1_Mus4 LINE L1 5870 6624 -12 1 787 427 299 9 9 chr13 26511546 26511654 -93772658 - B4A SINE B4 -12 280 173 1 787 5409 171 22 5 chr13 26512193 26513203 -93771109 - Lx2B LINE L1 -100 6900 5874 1 787 5539 176 6 26 chr13 26513201 26514344 -93769968 + Lx2B LINE L1 4752 5871 -6 1 787 283 368 121 28 chr13 26514623 26514838 -93769474 - MT2A LTR ERVL -71 462 228 1 787 287 326 86 29 chr13 26514888 26515027 -93769285 - MTEa LTR MaLR -232 147 1 2 787 586 306 0 0 chr13 26515025 26515149 -93769163 + RSINE1 SINE B4 1 124 -41 2 787 225 318 58 50 chr13 26515037 26515176 -93769136 + B2_Mm2 SINE B2 12 151 -44 2 787 450 375 58 25 chr13 26515406 26515682 -93768630 + B4 SINE B4 4 288 -4 2 787 259 347 40 48 chr13 26515847 26515971 -93768341 + ID_B1 SINE B4 35 157 -67 2 787 239 79 0 26 chr13 26516028 26516067 -93768245 + (CTG)n Simple_repeat Simple_repeat 1 38 0 2 787 234 91 0 0 chr13 26517271 26517304 -93767008 + (A)n Simple_repeat Simple_repeat 1 33 0 2 787 3576 181 51 6 chr13 26518172 26518834 -93765478 + RLTR17 LTR ERVK 1 692 0 2 787 459 302 94 0 chr13 26519344 26519536 -93764776 + ID_B1 SINE B4 5 214 -10 2 787 279 0 0 0 chr13 26519537 26519568 -93764744 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 2 787 31 0 0 0 chr13 26519846 26519877 -93764435 + AT_rich Low_complexity Low_complexity 1 31 0 3 787 2751 75 0 36 chr13 26520353 26520769 -93763543 - L1_Mus1 LINE L1 0 6567 6197 3 787 895 81 0 0 chr13 26520771 26520894 -93763418 + L1_Mus1 LINE L1 6067 6189 -378 3 787 2112 158 119 5 chr13 26521042 26521463 -93762849 + ORR1B2-int LTR MaLR 1041 1509 0 3 787 1844 181 48 25 chr13 26521463 26521821 -93762491 + ORR1B2 LTR MaLR 1 366 -1 3 787 898 200 0 11 chr13 26522433 26522615 -93761697 - Lx LINE L1 -4 6650 6471 3 787 471 354 92 19 chr13 26522870 26523348 -93760964 + L1ME3A LINE L1 5621 6133 -40 3 787 648 181 18 0 chr13 26523471 26523637 -93760675 + (TA)n Simple_repeat Simple_repeat 1 169 0 3 787 181 109 78 0 chr13 26523672 26523736 -93760576 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 787 25 65 0 0 chr13 26523794 26523840 -93760472 + AT_rich Low_complexity Low_complexity 1 46 0 3 787 558 325 68 16 chr13 26523845 26524227 -93760085 - Lx9 LINE L1 -133 7511 7110 3 787 488 402 48 17 chr13 26524283 26524574 -93759738 + Tigger7 DNA MER2_type 7 306 -2185 3 787 227 256 58 25 chr13 26524754 26524874 -93759438 + Tigger7 DNA MER2_type 2285 2408 -83 3 787 230 299 164 16 chr13 26525195 26525370 -93758942 + MIRb SINE MIR 4 194 -68 3 787 566 294 0 0 chr13 26525476 26525602 -93758710 - B3A SINE B2 -71 127 2 4 787 910 268 33 0 chr13 26526886 26527099 -93757213 - ID_B1 SINE B4 -4 220 1 4 787 281 327 173 46 chr13 26527419 26527592 -93756720 + MLT2B2 LTR ERVL 51 245 -270 4 787 405 0 0 0 chr13 26527633 26527678 -93756634 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 787 436 325 0 39 chr13 26527704 26527832 -93756480 - B3 SINE B2 -93 123 1 4 787 632 277 0 14 chr13 26528249 26528392 -93755920 - MTD LTR MaLR -244 175 35 4 787 302 98 20 0 chr13 26529791 26529842 -93754470 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 4 787 2846 190 79 11 chr13 26529860 26530429 -93753883 - RLTR18 LTR ERVK 0 616 9 4 787 319 291 90 28 chr13 26530451 26530596 -93753716 - HAL1-3A_ME LINE L1 -421 2437 2284 4 787 29 28 0 0 chr13 26530703 26530739 -93753573 + AT_rich Low_complexity Low_complexity 1 36 0 4 787 267 167 133 0 chr13 26531198 26531258 -93753054 + MLT1B LTR MaLR 290 357 -33 5 787 201 217 0 21 chr13 26531764 26531811 -93752501 + GA-rich Low_complexity Low_complexity 4 49 0 5 787 33838 36 2 0 chr13 26532467 26539111 -93745201 + L1Md_T LINE L1 1 5589 -297 5 787 9035 5 0 0 chr13 26539111 26540107 -93744205 + L1Md_T LINE L1 5590 6585 0 5 787 385 264 199 7 chr13 26540683 26540824 -93743488 - B4 SINE B4 -120 172 5 5 787 195 129 0 0 chr13 26541278 26541309 -93743003 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 787 4387 214 29 7 chr13 26541518 26542499 -93741813 - Lx2B LINE L1 -2 6998 5997 5 787 5334 173 56 15 chr13 26542501 26542513 -93741799 + Lx2B LINE L1 4655 4666 -1211 5 787 360 0 0 0 chr13 26542513 26542553 -93741759 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 5 787 5334 171 52 15 chr13 26542553 26543841 -93740471 + Lx2B LINE L1 4667 6015 -985 5 787 452 292 23 80 chr13 26544096 26544271 -93740041 + ORR1E LTR MaLR 6 170 -189 5 787 6206 101 55 15 chr13 26544283 26545430 -93738882 - L1_Mus3 LINE L1 -10 6628 5434 5 787 9578 101 24 42 chr13 26545426 26547132 -93737180 + MusHAL1 LINE L1 457 2132 -580 6 787 233 348 51 25 chr13 26547150 26547268 -93737044 + ORR1E LTR MaLR 201 321 -58 5 787 325 334 104 49 chr13 26547353 26547734 -93736578 + MLT2B1 LTR ERVL 30 443 -72 6 787 222 193 0 0 chr13 26547746 26547803 -93736509 + CT-rich Low_complexity Low_complexity 1 57 0 6 787 1155 89 0 16 chr13 26547828 26548010 -93736302 + (TTC)n Simple_repeat Simple_repeat 2 180 0 6 787 354 183 0 0 chr13 26548010 26548081 -93736231 + CT-rich Low_complexity Low_complexity 1 71 0 6 787 306 299 79 6 chr13 26548081 26548259 -93736053 + ERVL-B4-int LTR ERVL 90 280 -5434 6 787 180 0 0 0 chr13 26548723 26548743 -93735569 + (CATAA)n Simple_repeat Simple_repeat 2 21 0 6 787 555 174 45 0 chr13 26548775 26548881 -93735431 + B1_Mur2 SINE Alu 12 124 -25 6 787 323 269 45 55 chr13 26548787 26548897 -93735415 + ID_B1 SINE B4 108 216 -8 6 787 450 0 0 0 chr13 26549867 26549917 -93734395 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 787 234 62 0 0 chr13 26550169 26550201 -93734111 + (GA)n Simple_repeat Simple_repeat 2 33 0 7 787 483 250 0 0 chr13 26550623 26550719 -93733593 - ID_B1 SINE B4 0 224 129 7 787 306 279 41 83 chr13 26550719 26550743 -93733569 - PB1D10 SINE Alu -1 115 1 7 787 426 39 0 0 chr13 26552029 26552081 -93732231 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 787 545 333 88 38 chr13 26552106 26552558 -93731754 - Lx9 LINE L1 -212 7432 6958 7 787 1103 212 16 8 chr13 26552556 26552885 -93731427 - Lx9 LINE L1 -1689 5955 5591 7 787 258 32 0 0 chr13 26552986 26553017 -93731295 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 787 277 62 42 0 chr13 26553610 26553658 -93730654 + (GA)n Simple_repeat Simple_repeat 2 51 0 7 787 451 342 0 7 chr13 26553677 26553810 -93730502 + B1F SINE Alu 1 133 -16 7 787 1426 89 5 19 chr13 26553810 26554017 -93730295 + L1_Mus1 LINE L1 6364 6567 0 7 787 451 342 0 7 chr13 26554017 26554033 -93730279 + B1F SINE Alu 134 149 0 7 787 24 32 0 0 chr13 26555035 26555066 -93729246 + AT_rich Low_complexity Low_complexity 1 31 0 7 787 327 320 10 20 chr13 26555131 26555233 -93729079 - B4A SINE B4 -187 105 5 8 787 313 360 14 28 chr13 26556022 26556165 -93728147 - MER58A DNA MER1_type -83 141 1 8 787 226 401 133 6 chr13 26557559 26557732 -93726580 - MIRc SINE MIR -17 251 57 8 787 312 27 0 0 chr13 26558591 26558628 -93725684 + (TC)n Simple_repeat Simple_repeat 1 37 0 8 787 444 37 0 0 chr13 26558628 26558681 -93725631 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 787 282 143 0 0 chr13 26559102 26559151 -93725161 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 787 703 257 52 38 chr13 26559187 26559397 -93724915 + ID_B1 SINE B4 8 220 -4 8 787 222 192 55 55 chr13 26559349 26559404 -93724908 + PB1D7 SINE Alu 66 120 0 8 787 1225 237 121 3 chr13 26560120 26560425 -93723887 - MTD LTR MaLR 0 419 79 8 787 1020 176 89 13 chr13 26560469 26560705 -93723607 - Lx3A LINE L1 -5 6976 6723 8 787 345 256 23 11 chr13 26560705 26560792 -93723520 - MTD LTR MaLR -333 88 1 8 787 452 339 0 8 chr13 26560792 26560911 -93723401 - B1F1 SINE Alu -30 119 2 9 787 226 159 0 0 chr13 26560935 26560979 -93723333 + Lx8 LINE L1 7428 7471 -2 9 787 321 26 0 0 chr13 26561790 26561828 -93722484 + (GA)n Simple_repeat Simple_repeat 1 38 0 9 787 186 43 0 0 chr13 26562010 26562033 -93722279 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 787 402 291 129 25 chr13 26562046 26562247 -93722065 + ID_B1 SINE B4 2 223 -1 9 787 2174 156 29 45 chr13 26562247 26562601 -93721711 - RMER17A LTR ERVK -15 736 331 9 787 558 41 0 0 chr13 26562601 26562674 -93721638 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 9 787 2174 114 51 6 chr13 26562674 26562993 -93721319 - RMER17A LTR ERVK -421 330 1 9 787 916 320 81 12 chr13 26563142 26563181 -93721131 + MTD LTR MaLR 1 38 -381 9 787 1270 225 121 12 chr13 26563181 26563527 -93720785 - ORR1C2 LTR MaLR 0 384 1 9 787 916 320 81 12 chr13 26563527 26563822 -93720490 + MTD LTR MaLR 39 357 -62 9 787 953 257 0 50 chr13 26563828 26563968 -93720344 + B3 SINE B2 7 145 -71 9 787 2413 188 39 71 chr13 26563968 26564558 -93719754 - RMER15 LTR ERVL 0 575 5 1 787 953 257 0 50 chr13 26564558 26564638 -93719674 + B3 SINE B2 146 216 0 9 787 248 207 75 29 chr13 26564644 26564712 -93719600 + MTD LTR MaLR 337 405 -14 9 787 640 283 45 69 chr13 26565592 26565839 -93718473 + MTEb LTR MaLR 127 367 -12 1 787 197 180 20 0 chr13 26565910 26565960 -93718352 + (TA)n Simple_repeat Simple_repeat 1 51 0 1 787 200 194 0 0 chr13 26566284 26566320 -93717992 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 787 746 314 36 128 chr13 26567643 26567972 -93716340 - MTEa LTR MaLR -73 306 8 1 787 342 374 33 20 chr13 26568033 26568183 -93716129 + RSINE1 SINE B4 14 165 0 1 787 321 117 0 0 chr13 26568196 26568256 -93716056 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 787 25 31 0 0 chr13 26568261 26568293 -93716019 + AT_rich Low_complexity Low_complexity 1 32 0 1 787 180 77 0 0 chr13 26568313 26568339 -93715973 + (TTTG)n Simple_repeat Simple_repeat 4 29 0 1 787 917 90 0 148 chr13 26568444 26568613 -93715699 - B1_Mus1 SINE Alu -4 144 1 1 787 3502 130 57 5 chr13 26568689 26569152 -93715160 + Lx LINE L1 6056 6518 -136 1 787 192 40 0 0 chr13 26569152 26569177 -93715135 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 1 787 3502 130 57 5 chr13 26569177 26569279 -93715033 + Lx LINE L1 6519 6648 -6 1 787 322 302 146 8 chr13 26569294 26569424 -93714888 + L1M2 LINE L1 4361 4508 -1635 1 787 7022 240 90 28 chr13 26569960 26572847 -93711465 - Lx7 LINE L1 -6 7690 4646 1 787 1560 205 118 14 chr13 26572847 26573204 -93711108 - ORR1B1 LTR MaLR 0 394 1 1 787 4425 203 176 19 chr13 26573204 26573484 -93710828 - Lx7 LINE L1 -1235 4645 4314 1 787 240 159 0 125 chr13 26573485 26573557 -93710755 + RMER4A LTR ERVK 1 63 -403 1 787 28 0 0 0 chr13 26573557 26573585 -93710727 + AT_rich Low_complexity Low_complexity 1 28 0 1 787 252 100 75 0 chr13 26573590 26573670 -93710642 + (TA)n Simple_repeat Simple_repeat 2 87 0 1 787 574 128 11 0 chr13 26573689 26573783 -93710529 - Lx7 LINE L1 -2426 3454 3360 1 787 1123 221 24 34 chr13 26573830 26573954 -93710358 - Lx7 LINE L1 -3197 2683 2562 1 787 302 0 26 0 chr13 26573954 26573992 -93710320 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 787 1123 221 24 34 chr13 26573992 26574162 -93710150 - Lx7 LINE L1 -3319 2561 2392 1 787 409 292 20 96 chr13 26575392 26575589 -93708723 - B3A SINE B2 -16 182 1 1 787 490 317 7 40 chr13 26575600 26575748 -93708564 - B4 SINE B4 -85 207 65 1 787 228 207 34 17 chr13 26575856 26575915 -93708397 - LTR40b LTR ERVL -309 153 94 1 787 1911 173 91 3 chr13 26576870 26577235 -93707077 + Lx4B LINE L1 6658 7056 -2 1 787 198 0 0 0 chr13 26577341 26577363 -93706949 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 1 787 1552 40 101 0 chr13 26577705 26577904 -93706408 - L1Md_F2 LINE L1 -12 6570 6352 1 787 292 233 33 0 chr13 26578166 26578226 -93706086 + MLT2B5 LTR ERVL 3 64 -653 1 787 279 0 0 0 chr13 26578264 26578295 -93706017 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 787 5576 118 3 13 chr13 26578407 26579268 -93705044 - L1_Mus3 LINE L1 -3 6635 5783 1 787 676 93 0 48 chr13 26579279 26579433 -93704879 - L1Md_F2 LINE L1 0 6582 6458 1 787 1518 143 0 0 chr13 26579432 26579663 -93704649 - L1_Mm LINE L1 -103 5780 5550 1 787 3971 160 5 142 chr13 26579665 26580639 -93703673 + L1_Mm LINE L1 4652 5492 -391 1 787 421 312 14 86 chr13 26580745 26580955 -93703357 - B3A SINE B2 -3 195 1 1 787 693 325 55 45 chr13 26581013 26581322 -93702990 + MER44A DNA MER2_type 24 335 -4 1 787 407 327 0 0 chr13 26581685 26581798 -93702514 - PB1D10 SINE Alu 0 117 5 1 787 251 309 37 12 chr13 26581725 26581807 -93702505 - B4A SINE B4 -127 165 82 1 787 408 330 0 10 chr13 26582202 26582306 -93702006 + ID_B1 SINE B4 82 184 -40 1 787 1291 235 75 14 chr13 26582641 26582986 -93701326 + ORR1B1 LTR MaLR 1 366 -28 1 787 5746 211 41 14 chr13 26583022 26584299 -93700013 + ORR1B1-int LTR MaLR 199 1509 0 1 787 398 195 24 0 chr13 26584299 26584381 -93699931 + ORR1B1 LTR MaLR 1 84 -310 1 787 1222 237 77 14 chr13 26585093 26585380 -93698932 + ORR1B1 LTR MaLR 55 359 -8 1 787 651 258 80 16 chr13 26585472 26585669 -93698643 + B3A SINE B2 5 211 -5 1 787 833 278 33 30 chr13 26585785 26585872 -93698440 - L1MA4A LINE L1 -372 5931 5843 1 787 3423 99 4 2 chr13 26585872 26586346 -93697966 - MT2C_Mm LTR ERVL 0 475 1 1 787 833 278 33 30 chr13 26586346 26586588 -93697724 - L1MA4A LINE L1 -461 5842 5601 1 787 1166 47 0 0 chr13 26587585 26587734 -93696578 - L1_Mus1 LINE L1 0 6567 6419 1 787 823 31 0 0 chr13 26587734 26587830 -93696482 + L1_Mus1 LINE L1 6189 6284 -283 1 787 516 287 163 10 chr13 26588004 26588422 -93695890 + L1MA6 LINE L1 5411 5913 -387 1 787 933 236 5 38 chr13 26588445 26588630 -93695682 + B3 SINE B2 2 180 -36 1 787 279 0 0 0 chr13 26589950 26589981 -93694331 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 787 762 269 74 89 chr13 26590875 26591213 -93693099 - ORR1E LTR MaLR 0 359 27 1 787 301 308 45 62 chr13 26591360 26591657 -93692655 - MLT1B LTR MaLR -16 451 149 1 787 2244 181 87 13 chr13 26591773 26592222 -93692090 - Lx4A LINE L1 -3 7055 6574 1 787 4760 138 3 16 chr13 26592220 26593204 -93691108 + Lx4A LINE L1 5365 6340 -718 1 787 360 0 0 0 chr13 26593288 26593328 -93690984 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 787 25 0 0 0 chr13 26593997 26594022 -93690290 + AT_rich Low_complexity Low_complexity 1 25 0 1 787 377 348 38 86 chr13 26594123 26594472 -93689840 + MLT1C LTR MaLR 1 334 -56 1 787 369 0 0 0 chr13 26594507 26594548 -93689764 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 787 1141 324 75 14 chr13 26594633 26595125 -93689187 - MT2A LTR ERVL -11 522 1 1 787 419 157 0 8 chr13 26596088 26596210 -93688102 - L1_Mus3 LINE L1 -2 6636 6516 1 787 806 301 91 77 chr13 26596220 26596584 -93687728 - MTEa LTR MaLR -8 371 3 1 787 414 0 0 0 chr13 26597254 26597300 -93687012 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 787 813 21 0 0 chr13 26598397 26598492 -93685820 + (GAA)n Simple_repeat Simple_repeat 2 96 0 1 787 1209 101 0 0 chr13 26598492 26598671 -93685641 + (GGA)n Simple_repeat Simple_repeat 2 180 0 1 787 1584 73 0 14 chr13 26599206 26599427 -93684885 + L1_Mus1 LINE L1 6350 6567 0 1 787 26 0 0 0 chr13 26600601 26600627 -93683685 + AT_rich Low_complexity Low_complexity 1 26 0 1 787 264 59 0 0 chr13 26600808 26600842 -93683470 + (TTAA)n Simple_repeat Simple_repeat 4 37 0 1 787 236 326 35 0 chr13 26600850 26600936 -93683376 - B1F1 SINE Alu -52 97 9 1 787 3381 169 79 32 chr13 26600936 26601481 -93682831 + RLTR17 LTR ERVK 1 583 -109 1 787 694 88 114 0 chr13 26601481 26601521 -93682791 + L1_Mus2 LINE L1 6432 6471 -95 1 787 396 0 0 0 chr13 26601521 26601565 -93682747 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 787 694 88 114 0 chr13 26601565 26601638 -93682674 + L1_Mus2 LINE L1 6472 6556 -10 1 787 3381 169 79 32 chr13 26601638 26601734 -93682578 + RLTR17 LTR ERVK 584 670 -22 1 787 207 0 0 0 chr13 26601734 26601757 -93682555 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 787 3381 169 79 32 chr13 26601757 26601775 -93682537 + RLTR17 LTR ERVK 671 692 0 1 787 441 307 86 32 chr13 26602923 26603202 -93681110 + HERVL40-int LTR ERVL 3534 3827 -1703 1 787 222 37 0 0 chr13 26603705 26603732 -93680580 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 1 787 237 305 115 33 chr13 26604062 26604184 -93680128 + RMER15 LTR ERVL 199 330 -245 1 787 288 0 0 0 chr13 26605065 26605097 -93679215 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 787 222 0 0 73 chr13 26605171 26605212 -93679100 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 1 787 637 310 69 89 chr13 26606004 26606365 -93677947 - ORR1E LTR MaLR 0 359 6 1 787 3508 205 53 58 chr13 26606494 26607253 -93677059 - Lx3_Mus LINE L1 -1199 5810 5027 1 787 1363 154 74 11 chr13 26607253 26607522 -93676790 + Lx LINE L1 6357 6642 -12 1 98 3508 201 54 59 chr13 26607522 26607704 -93676608 - Lx3_Mus LINE L1 -854 5026 4876 1 788 351 186 161 63 chr13 26608208 26608351 -93675961 - Lx9 LINE L1 -8 7636 7480 1 788 208 111 21 43 chr13 26608353 26608400 -93675912 + (TATG)n Simple_repeat Simple_repeat 1 46 0 1 788 836 226 24 40 chr13 26608407 26608656 -93675656 - Lx9 LINE L1 -132 7512 7268 1 788 1375 298 11 24 chr13 26612155 26612238 -93672074 + ORR1D2 LTR MaLR 1 83 -287 1 788 1774 226 21 3 chr13 26612238 26612615 -93671697 + ORR1C2 LTR MaLR 1 384 0 1 788 1375 298 11 24 chr13 26612615 26612906 -93671406 + ORR1D2 LTR MaLR 84 370 0 1 788 2798 108 221 11 chr13 26613209 26613741 -93670571 - L1_Mus3 LINE L1 -6 6632 5989 1 788 33857 35 0 0 chr13 26613747 26618980 -93665332 + L1Md_T LINE L1 260 5589 -297 1 788 8955 7 0 3 chr13 26618980 26619979 -93664333 + L1Md_T LINE L1 5590 6585 0 1 788 222 143 0 0 chr13 26619982 26620031 -93664281 + (A)n Simple_repeat Simple_repeat 1 49 0 1 788 3694 78 3 21 chr13 26620033 26620112 -93664200 - L1_Mus3 LINE L1 -717 5921 5849 1 788 2868 33 191 0 chr13 26620112 26620478 -93663834 - RLTR10C LTR ERVK 0 436 1 1 788 3694 103 5 12 chr13 26620478 26620998 -93663314 - L1_Mus3 LINE L1 -35 5848 5326 1 788 444 354 46 10 chr13 26621153 26621347 -93662965 + B4A SINE B4 2 202 -90 1 788 356 278 9 36 chr13 26621340 26621452 -93662860 + MTD LTR MaLR 311 419 0 1 788 4252 60 2 4 chr13 26622355 26622892 -93661420 + L1Md_F2 LINE L1 6036 6571 -11 1 788 321 185 29 58 chr13 26622963 26623032 -93661280 - URR1B DNA MER1_type -1 224 158 1 788 1135 230 168 9 chr13 26623891 26624207 -93660105 + ORR1D2 LTR MaLR 3 368 -2 1 788 249 143 193 18 chr13 26624231 26624288 -93660024 - MTEb LTR MaLR -4 375 309 1 788 463 282 126 11 chr13 26624336 26624526 -93659786 - MTEb LTR MaLR -167 212 1 1 788 1450 266 103 22 chr13 26624921 26625424 -93658888 - RMER15 LTR ERVL -3 572 29 1 788 238 128 106 0 chr13 26625444 26625491 -93658821 - RMER15 LTR ERVL -516 59 8 1 788 2013 150 22 0 chr13 26625744 26626110 -93658202 - L1_Mur2 LINE L1 -1456 4421 4048 1 788 1963 121 0 7 chr13 26626110 26626410 -93657902 + L1_Mus4 LINE L1 6335 6632 -4 1 788 356 88 18 0 chr13 26626447 26626504 -93657808 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 788 219 362 38 67 chr13 26627326 26627536 -93656776 + MIR SINE MIR 15 218 -44 1 788 279 0 0 0 chr13 26627665 26627696 -93656616 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 788 1699 239 86 7 chr13 26627759 26628176 -93656136 + MT2A LTR ERVL 1 450 -83 1 788 223 265 17 17 chr13 26628177 26628274 -93656038 + (TA)n Simple_repeat Simple_repeat 2 98 0 1 788 207 0 0 0 chr13 26628274 26628297 -93656015 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 788 223 265 17 17 chr13 26628297 26628318 -93655994 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 788 387 0 0 0 chr13 26628977 26629020 -93655292 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 788 559 337 18 0 chr13 26629038 26629207 -93655105 - B3A SINE B2 -26 172 1 1 788 207 204 0 0 chr13 26629391 26629440 -93654872 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 788 988 295 109 3 chr13 26630017 26630347 -93653965 + MTEa LTR MaLR 15 379 0 2 788 249 299 65 0 chr13 26631461 26631538 -93652774 + ID_B1 SINE B4 81 162 -62 2 788 271 313 45 15 chr13 26631662 26631795 -93652517 - MER58A DNA MER1_type -79 145 9 2 788 513 280 142 23 chr13 26631975 26632192 -93652120 - MLT2B1 LTR ERVL -244 276 34 2 788 961 311 72 24 chr13 26632192 26632611 -93651701 + RCHARR1 DNA MER1_type 1 439 -535 2 788 4837 108 22 4 chr13 26632616 26633338 -93650974 + Lx3A LINE L1 6234 6968 -13 2 788 34479 50 14 4 chr13 26633338 26638588 -93645724 + L1Md_T LINE L1 278 5586 -297 2 788 8066 51 1 0 chr13 26638588 26639582 -93644730 + L1Md_T LINE L1 5587 6581 -1 2 788 26 0 0 0 chr13 26639589 26639615 -93644697 + AT_rich Low_complexity Low_complexity 1 26 0 2 788 321 296 8 17 chr13 26639652 26639769 -93644543 + RCHARR1 DNA MER1_type 858 973 -1 2 788 1331 174 5 0 chr13 26639840 26640058 -93644254 - URR1B DNA MER1_type -6 219 1 2 788 334 322 97 14 chr13 26640058 26640192 -93644120 - LTR50 LTR ERVL -147 648 503 2 788 344 160 0 85 chr13 26640679 26640761 -93643551 - HAL1-3A_ME LINE L1 -809 2049 1975 2 788 326 306 18 18 chr13 26640909 26641019 -93643293 + B3 SINE B2 104 213 -3 2 788 263 85 21 0 chr13 26641149 26641196 -93643116 + (ATTG)n Simple_repeat Simple_repeat 4 51 0 2 788 735 78 0 0 chr13 26641538 26641641 -93642671 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 2 788 369 0 0 0 chr13 26641641 26641682 -93642630 + (TTA)n Simple_repeat Simple_repeat 3 43 0 2 788 522 129 0 0 chr13 26642324 26642409 -93641903 + (CAT)n Simple_repeat Simple_repeat 3 87 0 2 788 264 165 33 56 chr13 26642945 26643035 -93641277 + T-rich Low_complexity Low_complexity 2 89 0 2 788 205 86 29 0 chr13 26643112 26643147 -93641165 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 2 788 274 315 76 33 chr13 26643658 26643750 -93640562 - PB1D7 SINE Alu -22 98 3 2 788 186 43 0 0 chr13 26644087 26644110 -93640202 + (TC)n Simple_repeat Simple_repeat 2 24 0 2 788 636 14 0 0 chr13 26644605 26644678 -93639634 + (TC)n Simple_repeat Simple_repeat 2 74 0 2 788 329 333 103 0 chr13 26646597 26646714 -93637598 - L2b LINE L2 -10 3365 3237 2 788 184 224 30 0 chr13 26647252 26647319 -93636993 + (TA)n Simple_repeat Simple_repeat 2 70 0 2 788 1005 218 72 9 chr13 26647443 26647665 -93636647 - MTD LTR MaLR -4 415 180 2 788 318 229 0 0 chr13 26647826 26647887 -93636425 - MTD LTR MaLR -266 113 53 2 788 222 313 65 85 chr13 26647942 26648141 -93636171 - L3b LINE CR1 -214 268 74 2 788 294 115 0 0 chr13 26648433 26648485 -93635827 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 2 788 274 111 27 27 chr13 26649238 26649312 -93635000 + (TCTCTG)n Simple_repeat Simple_repeat 3 76 0 2 788 210 118 0 0 chr13 26649315 26649349 -93634963 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 788 721 342 32 50 chr13 26649353 26649636 -93634676 - B4 SINE B4 -14 278 1 2 788 570 267 74 0 chr13 26651794 26651970 -93632342 + Lx6 LINE L1 7261 7449 -11 2 788 457 372 19 5 chr13 26652314 26652530 -93631782 + MER2 DNA MER2_type 125 343 -2 2 788 267 338 35 15 chr13 26654488 26654686 -93629626 + L1M5 LINE L1 5683 5884 -280 2 788 711 321 40 54 chr13 26655429 26655754 -93628558 + MTE2a LTR MaLR 2 324 -95 2 788 33 80 0 0 chr13 26656286 26656361 -93627951 + AT_rich Low_complexity Low_complexity 1 75 0 2 788 22 35 0 0 chr13 26656521 26656550 -93627762 + AT_rich Low_complexity Low_complexity 1 29 0 2 788 513 0 0 0 chr13 26658383 26658440 -93625872 + (TTTC)n Simple_repeat Simple_repeat 4 60 0 2 788 336 48 0 0 chr13 26658607 26658649 -93625663 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 788 258 333 114 40 chr13 26659280 26659455 -93624857 + MLT1H1 LTR MaLR 68 255 -300 2 788 3942 249 57 14 chr13 26659624 26660648 -93623664 + Lx6 LINE L1 6384 7451 -9 2 788 216 264 0 0 chr13 26661015 26661068 -93623244 + (TGAA)n Simple_repeat Simple_repeat 3 55 0 2 788 489 330 16 31 chr13 26662277 26662468 -93621844 + ORR1E LTR MaLR 1 188 -171 2 788 3636 210 63 40 chr13 26662507 26663390 -93620922 + RMER13B LTR ERVK 1 904 -4 2 788 309 281 0 136 chr13 26663397 26663537 -93620775 + ORR1E LTR MaLR 247 367 -12 2 788 372 320 162 62 chr13 26663581 26663696 -93620616 - MLT1F-int LTR MaLR -191 1298 1138 2 788 395 343 14 7 chr13 26663696 26663840 -93620472 + RSINE1 SINE B4 3 147 -18 2 788 399 41 0 0 chr13 26663842 26663891 -93620421 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 788 372 331 164 70 chr13 26663891 26664621 -93619691 - MLT1F-int LTR MaLR -283 1206 351 2 788 384 155 0 0 chr13 26664887 26664958 -93619354 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 788 23 0 0 0 chr13 26664989 26665012 -93619300 + AT_rich Low_complexity Low_complexity 1 23 0 2 788 508 304 114 0 chr13 26665752 26665910 -93618402 + MER5A DNA MER1_type 3 178 -11 2 788 297 0 0 0 chr13 26666209 26666242 -93618070 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 788 455 328 7 14 chr13 26670100 26670239 -93614073 + B1_Mur2 SINE Alu 12 149 0 2 788 5794 99 32 10 chr13 26670606 26671484 -93612828 - Lx3_Mus LINE L1 -1 7008 6112 2 788 2292 273 80 15 chr13 26671484 26671596 -93612716 - RMER1B Other Other -14 1052 943 2 788 387 0 0 0 chr13 26671596 26671639 -93612673 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 788 2292 281 69 26 chr13 26671639 26672465 -93611847 - RMER1B Other Other -124 942 126 2 788 711 90 0 0 chr13 26672517 26672617 -93611695 + (GAAA)n Simple_repeat Simple_repeat 2 101 0 2 788 5080 150 16 3 chr13 26672618 26672868 -93611444 + L1_Mus3 LINE L1 5023 5270 -613 2 788 234 0 0 0 chr13 26672868 26672894 -93611418 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 788 7398 102 19 4 chr13 26672894 26674231 -93610081 + L1_Mus3 LINE L1 5271 6638 0 2 788 2369 190 114 10 chr13 26674880 26675143 -93609169 - RLTR12A LTR ERVK -5 563 248 2 788 666 0 0 0 chr13 26675143 26675217 -93609095 + (TTC)n Simple_repeat Simple_repeat 1 74 0 2 788 2369 190 114 10 chr13 26675217 26675463 -93608849 - RLTR12A LTR ERVK -321 247 1 2 788 1151 273 98 14 chr13 26675979 26676325 -93607987 + MTE2a LTR MaLR 5 379 0 2 788 337 368 76 34 chr13 26676431 26676667 -93607645 + MER2 DNA MER2_type 1 246 -99 2 788 207 162 0 0 chr13 26677275 26677312 -93607000 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 788 352 366 21 63 chr13 26677387 26677530 -93606782 + ID_B1 SINE B4 84 220 -4 2 788 318 67 0 0 chr13 26677766 26677811 -93606501 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 788 561 307 54 27 chr13 26680488 26680709 -93603603 - RMER15 LTR ERVL -13 562 336 2 788 255 152 0 0 chr13 26680923 26680969 -93603343 + CT-rich Low_complexity Low_complexity 1 46 0 2 788 206 222 22 0 chr13 26681605 26681650 -93602662 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 788 1236 84 0 0 chr13 26681849 26682016 -93602296 + L1_Mus1 LINE L1 6401 6567 0 2 788 273 57 0 0 chr13 26683012 26683047 -93601265 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2 788 203 236 0 14 chr13 26683086 26683159 -93601153 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 788 441 358 0 0 chr13 26683204 26683341 -93600971 - RSINE1 SINE B4 -28 137 1 2 788 540 334 69 31 chr13 26684766 26685115 -93599197 + MLT1D LTR MaLR 124 485 -20 2 788 210 37 0 0 chr13 26685192 26685219 -93599093 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 2 788 198 174 0 0 chr13 26687401 26687447 -93596865 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 788 254 279 33 0 chr13 26687512 26687573 -93596739 + ID4_ SINE ID 4 66 -17 2 788 290 67 22 0 chr13 26687580 26687625 -93596687 + (CAT)n Simple_repeat Simple_repeat 1 46 0 2 788 28898 193 62 31 chr13 26687703 26688712 -93595600 + Lx3_Mus LINE L1 5 1348 -4538 2 788 207 0 0 0 chr13 26688712 26688735 -93595577 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 788 28898 95 28 56 chr13 26688735 26693954 -93590358 + Lx3_Mus LINE L1 1349 6393 -616 2 788 1185 48 7 0 chr13 26693954 26694100 -93590212 + B1_Mm SINE Alu 1 147 0 2 788 9092 117 10 40 chr13 26694100 26694715 -93589597 + Lx3_Mus LINE L1 6394 7001 -8 2 788 201 353 35 26 chr13 26697055 26697171 -93587141 + MIRb SINE MIR 137 257 -11 2 788 480 296 56 31 chr13 26697539 26697734 -93586578 + MLT1B LTR MaLR 191 390 0 2 788 231 246 0 32 chr13 26697808 26697871 -93586441 - MTEa LTR MaLR -2 377 317 2 788 5096 90 58 0 chr13 26697925 26698645 -93585667 - L1_Mus4 LINE L1 -2 6634 5873 2 788 290 91 0 0 chr13 26698645 26698697 -93585615 + Lx LINE L1 6344 6395 -243 2 788 950 285 25 8 chr13 26698704 26698948 -93585364 - MTEa LTR MaLR -131 248 1 2 788 184 234 42 21 chr13 26699507 26699555 -93584757 - MIRb SINE MIR -35 233 185 2 788 3228 240 46 40 chr13 26700285 26700427 -93583885 - Lx7 LINE L1 0 7696 7549 2 788 3440 73 30 2 chr13 26700427 26700896 -93583416 + L1Md_F2 LINE L1 6098 6579 -3 2 788 3228 240 46 40 chr13 26700896 26701014 -93583298 - Lx7 LINE L1 -148 7548 7423 2 788 290 26 0 25 chr13 26701014 26701054 -93583258 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 788 3228 240 46 40 chr13 26701054 26701636 -93582676 - Lx7 LINE L1 -274 7422 6847 2 788 2231 159 21 3 chr13 26701636 26702021 -93582291 - ORR1B1 LTR MaLR 0 394 3 2 788 3228 208 174 23 chr13 26702021 26702442 -93581870 - Lx7 LINE L1 -850 6846 6362 2 788 3285 41 5 0 chr13 26702624 26703018 -93581294 + MTA_Mm LTR MaLR 1 396 0 2 788 242 260 194 52 chr13 26703265 26703456 -93580856 - Lx8 LINE L1 -3 7470 7253 2 788 739 101 17 0 chr13 26704181 26704300 -93580012 + (GAAAA)n Simple_repeat Simple_repeat 2 122 0 2 788 909 345 48 27 chr13 26704899 26705417 -93578895 - Lx8 LINE L1 -29 7444 6916 2 788 697 204 18 23 chr13 26705430 26705601 -93578711 - L1_Rod LINE L1 -322 5525 5356 2 788 17647 56 2 1 chr13 26705591 26708541 -93575771 - L1Md_F2 LINE L1 0 6582 3629 2 788 4867 246 49 72 chr13 26708539 26709135 -93575177 - L1_Rod LINE L1 -496 5351 4731 2 788 228 35 0 0 chr13 26709135 26709164 -93575148 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 788 4867 246 49 72 chr13 26709164 26710393 -93573919 - L1_Rod LINE L1 -1117 4730 3574 2 788 180 0 0 0 chr13 26710393 26710413 -93573899 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 788 4867 246 49 72 chr13 26710413 26710698 -93573614 - L1_Rod LINE L1 -2274 3573 3290 2 788 762 226 103 16 chr13 26710747 26710931 -93573381 - B3 SINE B2 -10 206 7 2 788 380 276 69 37 chr13 26710942 26711130 -93573182 - L1MA7 LINE L1 -141 6171 5978 2 788 1107 69 0 14 chr13 26711229 26711366 -93572946 + B1_Mus1 SINE Alu 2 137 -11 2 788 238 67 44 0 chr13 26711366 26711411 -93572901 + (CAA)n Simple_repeat Simple_repeat 2 48 0 3 788 2497 61 61 6 chr13 26712461 26712789 -93571523 + ORR1A1 LTR MaLR 1 346 0 3 788 13639 60 8 3 chr13 26712789 26714571 -93569741 + ORR1A1-int LTR MaLR 1 1792 0 3 788 1920 47 254 0 chr13 26714571 26714847 -93569465 + ORR1A1 LTR MaLR 1 346 0 3 788 351 360 22 129 chr13 26714924 26715195 -93569117 + MTD LTR MaLR 70 311 -108 3 788 3849 104 11 2 chr13 26715197 26715744 -93568568 + L1_Mus3 LINE L1 6067 6618 -20 3 788 21 0 0 0 chr13 26715761 26715782 -93568530 + AT_rich Low_complexity Low_complexity 1 21 0 3 788 334 275 26 44 chr13 26715782 26715896 -93568416 + MTD LTR MaLR 302 413 -6 3 788 22 0 0 0 chr13 26716142 26716164 -93568148 + AT_rich Low_complexity Low_complexity 1 22 0 3 788 2220 209 38 0 chr13 26716909 26717383 -93566929 - Lx4B LINE L1 -681 6377 5886 3 788 1366 227 65 20 chr13 26717382 26717733 -93566579 + Lx4B LINE L1 6397 6763 -295 3 788 225 132 0 0 chr13 26717869 26717907 -93566405 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 3 788 237 65 0 0 chr13 26718018 26718049 -93566263 + (T)n Simple_repeat Simple_repeat 1 31 0 3 788 2223 22 58 0 chr13 26718080 26718355 -93565957 - L1Md_F3 LINE L1 -16 6568 6278 3 788 639 319 26 11 chr13 26718820 26719086 -93565226 - Lx8 LINE L1 -202 7271 7002 3 788 240 284 76 76 chr13 26719445 26719563 -93564749 - PB1D7 SINE Alu -2 118 1 3 788 510 291 23 8 chr13 26720258 26720386 -93563926 + RSINE1 SINE B4 1 130 -35 3 788 724 321 75 29 chr13 26720608 26721153 -93563159 - L1MD2 LINE L1 -383 5976 5407 3 788 648 296 98 6 chr13 26721389 26721746 -93562566 - Lx9 LINE L1 -21 7623 7234 3 788 289 304 0 0 chr13 26721748 26721827 -93562485 - Lx9 LINE L1 -954 6690 6612 3 788 182 62 31 0 chr13 26721978 26722010 -93562302 + (TTTTTA)n Simple_repeat Simple_repeat 3 35 0 3 788 1093 84 18 0 chr13 26723748 26723914 -93560398 + (TTTTC)n Simple_repeat Simple_repeat 1 169 0 3 788 210 37 0 0 chr13 26723919 26723946 -93560366 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3 788 1040 95 0 0 chr13 26723946 26724083 -93560229 - B1_Mus1 SINE Alu -10 138 2 3 788 581 283 0 96 chr13 26725087 26725307 -93559005 + B3A SINE B2 20 216 0 3 788 381 352 54 15 chr13 26725338 26725468 -93558844 + RSINE1 SINE B4 3 137 -28 3 788 225 0 0 0 chr13 26725487 26725512 -93558800 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 788 432 0 0 0 chr13 26725512 26725559 -93558753 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 788 1101 48 7 14 chr13 26725608 26725755 -93558557 + B1_Mm SINE Alu 2 147 0 3 788 281 333 51 20 chr13 26726577 26726675 -93557637 - PB1D7 SINE Alu -1 119 19 3 788 939 275 90 64 chr13 26726731 26727453 -93556859 - L1M2 LINE L1 -470 5821 5058 3 788 5908 99 19 10 chr13 26727489 26728369 -93555943 - L1_Mus3 LINE L1 0 6638 5751 3 788 7998 59 0 1 chr13 26728729 26730206 -93554106 - L1Md_F2 LINE L1 -12 6570 5095 3 788 23 0 0 0 chr13 26731236 26731259 -93553053 + AT_rich Low_complexity Low_complexity 1 23 0 3 788 772 189 47 31 chr13 26731872 26732063 -93552249 - B2_Mm2 SINE B2 0 195 2 3 788 21 57 0 0 chr13 26732203 26732238 -93552074 + AT_rich Low_complexity Low_complexity 1 35 0 3 788 773 40 0 10 chr13 26732410 26732512 -93551800 + (TA)n Simple_repeat Simple_repeat 1 101 0 3 788 1668 182 78 2 chr13 26733806 26734183 -93550129 + RMER5 LTR ERV1 13 524 -10 3 788 857 293 64 14 chr13 26734787 26735147 -93549165 + MTEa LTR MaLR 2 379 0 3 788 207 88 0 0 chr13 26735340 26735374 -93548938 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 3 788 966 18 0 0 chr13 26737321 26737433 -93546879 + (TTC)n Simple_repeat Simple_repeat 3 114 0 3 98 1473 220 6 29 chr13 26738339 26738718 -93545594 + RMER19C LTR ERVK 261 661 -241 3 789 388 211 0 0 chr13 26738718 26738789 -93545523 - ORR1C1 LTR MaLR -313 71 1 3 789 3436 276 71 48 chr13 26738790 26739554 -93544758 - ORR1C1-int LTR MaLR -1 1369 586 3 789 441 0 0 0 chr13 26739554 26739603 -93544709 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 789 3436 276 71 48 chr13 26739603 26740177 -93544135 - ORR1C1-int LTR MaLR -785 585 1 3 789 1078 204 177 28 chr13 26740177 26740504 -93543808 - ORR1C1 LTR MaLR 0 378 3 3 789 291 289 4 24 chr13 26740514 26740599 -93543713 - ID4_ SINE ID -54 98 11 3 789 6951 127 44 22 chr13 26741411 26742572 -93541740 + Lx3A LINE L1 5793 6978 -3 3 789 402 360 72 20 chr13 26743920 26744073 -93540239 + RSINE1 SINE B4 5 165 0 3 789 405 0 0 0 chr13 26744074 26744119 -93540193 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 3 789 465 19 0 0 chr13 26744224 26744278 -93540034 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 789 1097 291 39 8 chr13 26744351 26744708 -93539604 - ORR1D2 LTR MaLR -2 368 1 3 789 3265 292 60 69 chr13 26744708 26745099 -93539213 - ORR1D2-int LTR MaLR 0 1370 1000 3 789 639 0 0 0 chr13 26745099 26745170 -93539142 + (TC)n Simple_repeat Simple_repeat 1 71 0 3 789 3265 298 59 68 chr13 26745170 26746204 -93538108 - ORR1D2-int LTR MaLR -371 999 3 3 789 617 300 32 54 chr13 26746205 26746443 -93537869 - ORR1D2 LTR MaLR 0 370 132 3 789 297 0 0 0 chr13 26746491 26746524 -93537788 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 789 323 128 0 50 chr13 26747796 26747895 -93536417 + A-rich Low_complexity Low_complexity 2 95 0 3 789 291 318 0 64 chr13 26748041 26748135 -93536177 - RSINE1 SINE B4 0 165 78 3 789 288 362 51 74 chr13 26748171 26748347 -93535965 - B4 SINE B4 -118 174 3 3 789 381 22 0 0 chr13 26750244 26750290 -93534022 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 789 450 332 55 38 chr13 26750327 26750480 -93533832 + Lx8 LINE L1 7172 7328 -145 3 789 396 40 0 0 chr13 26750480 26750530 -93533782 + (TATG)n Simple_repeat Simple_repeat 2 51 0 3 789 450 332 55 38 chr13 26750530 26750667 -93533645 + Lx8 LINE L1 7329 7466 -7 3 789 373 354 129 15 chr13 26750853 26751054 -93533258 - MIRb SINE MIR -11 257 34 3 789 252 86 0 0 chr13 26752162 26752197 -93532115 + (T)n Simple_repeat Simple_repeat 1 35 0 3 789 1122 90 0 0 chr13 26752197 26752342 -93531970 - B1_Mm SINE Alu 0 147 3 3 789 835 62 0 0 chr13 26752896 26753008 -93531304 - B1_Mm SINE Alu 0 147 36 3 789 849 45 0 9 chr13 26753101 26753214 -93531098 - B1_Mm SINE Alu 0 147 36 3 789 288 70 0 0 chr13 26753280 26753323 -93530989 + (T)n Simple_repeat Simple_repeat 1 43 0 3 789 1186 54 0 0 chr13 26753326 26753474 -93530838 - B1_Mus1 SINE Alu 0 148 1 3 789 1428 190 29 16 chr13 26753732 26754042 -93530270 + Lx9 LINE L1 6827 7140 -504 3 789 483 303 33 33 chr13 26754472 26754622 -93529690 - RSINE1 SINE B4 -3 162 13 3 789 523 310 0 14 chr13 26754648 26754792 -93529520 - B1_Mur1 SINE Alu -2 147 6 3 789 270 274 61 73 chr13 26754801 26754966 -93529346 + Charlie1b DNA MER1_type 355 517 -6 3 789 395 328 30 0 chr13 26755139 26755273 -93529039 - ID_B1 SINE B4 0 224 87 3 789 256 331 57 57 chr13 26755540 26755697 -93528615 + MIR SINE MIR 56 212 -50 3 789 838 365 14 11 chr13 26755748 26755827 -93528485 - B4A SINE B4 0 292 216 3 789 245 83 42 0 chr13 26755827 26755875 -93528437 + (TCTCTG)n Simple_repeat Simple_repeat 3 52 0 3 789 838 365 14 11 chr13 26755875 26756075 -93528237 - B4A SINE B4 -77 215 12 3 789 738 77 14 5 chr13 26756504 26756612 -93527700 - B1_Mus2 SINE Alu -2 145 2 3 789 301 296 104 0 chr13 26757469 26757584 -93526728 - B3 SINE B2 -4 212 86 3 789 419 307 15 60 chr13 26757756 26757954 -93526358 - MTEa LTR MaLR -9 370 166 3 789 396 0 0 0 chr13 26759270 26759314 -93524998 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 789 2204 319 44 42 chr13 26759541 26760544 -93523768 - Lx9 LINE L1 -217 7427 6423 3 789 14898 89 9 1 chr13 26760624 26762740 -93521572 - L1Md_F LINE L1 -499 5384 3251 3 789 36100 43 12 12 chr13 26762739 26764384 -93519928 - L1Md_T LINE L1 0 6582 4918 3 789 225 183 46 77 chr13 26764384 26764449 -93519863 + RMER20A LTR ERVK 186 248 -268 3 789 36100 43 12 12 chr13 26764449 26768118 -93516194 - L1Md_T LINE L1 0 4917 1203 3 789 6321 56 35 20 chr13 26768084 26768934 -93515378 - L1Md_Gf LINE L1 -5380 1142 280 3 789 14337 98 24 6 chr13 26768935 26771833 -93512479 - L1Md_F LINE L1 -2617 3266 315 3 789 1225 276 61 29 chr13 26771849 26772405 -93511907 + L1_Rod LINE L1 4840 5413 -434 3 789 1084 227 101 12 chr13 26772949 26773275 -93511037 + L1_Rod LINE L1 5431 5785 -62 3 789 2799 76 36 8 chr13 26773519 26773904 -93510408 - MTA_Mm LTR MaLR 0 396 1 3 789 180 231 0 37 chr13 26774126 26774207 -93510105 + CT-rich Low_complexity Low_complexity 1 78 0 3 789 7952 53 7 0 chr13 26774561 26775776 -93508536 - L1Md_F2 LINE L1 -1 6581 5359 3 789 2763 31 2 93 chr13 26775776 26776208 -93508104 - RLTR10 LTR ERVK -5 385 1 3 789 8865 17 0 0 chr13 26776210 26777205 -93507107 - RLTR10-int LTR ERVK -3 1984 990 3 789 4034 50 10 6 chr13 26777480 26778361 -93505951 - RLTR10-int LTR ERVK -989 998 41 3 789 2746 34 2 93 chr13 26778371 26778802 -93505510 - RLTR10 LTR ERVK -5 385 1 3 789 31267 83 1 17 chr13 26778802 26783948 -93500364 - L1Md_F LINE L1 -520 5363 304 3 789 583 215 71 57 chr13 26783981 26784193 -93500119 - Lx7 LINE L1 -1 7695 7481 3 789 3368 33 2 0 chr13 26784252 26784647 -93499665 - MTA_Mm LTR MaLR 0 396 1 3 789 21 57 0 0 chr13 26786595 26786630 -93497682 + AT_rich Low_complexity Low_complexity 1 35 0 3 789 684 307 37 4 chr13 26789389 26789631 -93494681 + L1MA6 LINE L1 5821 6070 -230 3 789 2040 159 119 94 chr13 26790243 26790763 -93493549 - RMER16 LTR ERVK 0 533 1 3 789 390 91 0 0 chr13 26791573 26791628 -93492684 + (TAA)n Simple_repeat Simple_repeat 1 55 0 3 789 227 350 102 53 chr13 26792023 26792249 -93492063 - MLT1N2 LTR MaLR -12 550 314 3 789 226 351 52 17 chr13 26792591 26792765 -93491547 + RMER15 LTR ERVL 380 559 -16 3 789 215 61 0 29 chr13 26793180 26793214 -93491098 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 3 789 202 61 0 57 chr13 26793455 26793490 -93490822 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 3 789 374 360 153 34 chr13 26793827 26794330 -93489982 + L1MEf LINE L1 421 983 -5217 3 789 988 77 0 0 chr13 26795090 26795220 -93489092 - B1_Mus1 SINE Alu -18 130 1 3 789 1714 208 71 8 chr13 26795458 26795850 -93488462 + MTD LTR MaLR 3 419 0 3 789 705 270 93 24 chr13 26796390 26796595 -93487717 + MTEb LTR MaLR 9 227 -152 3 789 2199 154 3 11 chr13 26796618 26796978 -93487334 + Lx3C LINE L1 6286 6642 -334 3 789 636 53 0 0 chr13 26796979 26797054 -93487258 - L1Md_F2 LINE L1 -189 6393 6319 3 789 532 15 0 0 chr13 26797054 26797121 -93487191 + L1Md_T LINE L1 6516 6582 0 4 789 1586 169 11 34 chr13 26797125 26797474 -93486838 + Lx3C LINE L1 6632 6972 -4 3 789 273 279 4 47 chr13 26797520 26797641 -93486671 - B1_Mur2 SINE Alu -21 128 15 4 789 410 127 14 0 chr13 26798443 26798514 -93485798 + (TA)n Simple_repeat Simple_repeat 1 72 0 4 789 306 318 0 0 chr13 26798798 26798883 -93485429 + B1F SINE Alu 14 98 -51 4 789 232 192 27 14 chr13 26798945 26799019 -93485293 + GA-rich Low_complexity Low_complexity 3 77 0 4 789 777 294 22 107 chr13 26799736 26800110 -93484202 + MTEa LTR MaLR 31 379 0 4 789 503 151 11 0 chr13 26800523 26800616 -93483696 + GA-rich Low_complexity Low_complexity 3 96 0 4 789 204 40 0 0 chr13 26800674 26800699 -93483613 + (GAAAA)n Simple_repeat Simple_repeat 5 29 0 4 789 405 0 0 0 chr13 26801131 26801176 -93483136 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 789 447 294 34 75 chr13 26801189 26801336 -93482976 + B1F1 SINE Alu 1 141 -8 4 789 492 174 27 9 chr13 26802005 26802115 -93482197 - Lx9 LINE L1 -150 7494 7383 4 789 419 178 85 0 chr13 26802124 26802242 -93482070 + Lx9 LINE L1 7517 7644 0 4 789 2340 218 31 12 chr13 26802271 26802782 -93481530 + RLTR11A LTR ERVK 1 521 -7 4 789 870 203 49 45 chr13 26802974 26803217 -93481095 + RMER1B Other Other 819 1062 -4 4 789 1534 188 274 18 chr13 26803601 26804057 -93480255 + RMER15 LTR ERVL 3 575 0 4 789 1107 287 66 9 chr13 26804351 26804699 -93479613 + ORR1D2 LTR MaLR 3 370 0 4 789 733 325 108 25 chr13 26805041 26805750 -93478562 + Lx7 LINE L1 6434 7232 -241 4 789 327 25 0 0 chr13 26805750 26805790 -93478522 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 789 643 339 119 45 chr13 26805790 26805877 -93478435 + Lx7 LINE L1 7233 7324 -149 4 789 414 0 0 0 chr13 26808594 26808640 -93475672 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 789 889 274 90 80 chr13 26808659 26808948 -93475364 - B4 SINE B4 0 292 1 4 789 227 287 62 31 chr13 26809600 26809697 -93474615 - B3 SINE B2 0 216 117 4 789 276 30 0 0 chr13 26809820 26809853 -93474459 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 4 789 550 322 35 0 chr13 26811105 26811248 -93473064 - RSINE1 SINE B4 -16 149 2 4 789 1660 250 71 19 chr13 26811987 26812452 -93471860 + MT2A LTR ERVL 1 489 -44 4 789 189 0 0 0 chr13 26812453 26812474 -93471838 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 789 219 114 0 0 chr13 26812480 26812515 -93471797 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 789 294 210 19 39 chr13 26812578 26812682 -93471630 - L1MA8 LINE L1 -5 6286 6185 4 789 361 353 70 27 chr13 26812877 26813135 -93471177 - B4A SINE B4 -18 274 6 4 789 241 159 46 31 chr13 26813139 26813204 -93471108 + T-rich Low_complexity Low_complexity 4 69 0 4 789 1295 256 35 7 chr13 26814828 26815115 -93469197 - Lx5 LINE L1 -5 7045 6751 4 789 432 312 18 30 chr13 26816584 26816749 -93467563 + RSINE1 SINE B4 2 164 -1 4 789 313 304 236 111 chr13 26817030 26817357 -93466955 + MTE2a LTR MaLR 1 368 -11 4 789 272 300 16 8 chr13 26818755 26818876 -93465436 + T-rich Low_complexity Low_complexity 3 124 0 4 789 844 313 80 16 chr13 26819440 26819953 -93464359 + L1MA5 LINE L1 5755 6300 0 4 789 573 15 0 0 chr13 26820590 26820656 -93463656 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 789 221 116 0 44 chr13 26821170 26821215 -93463097 + A-rich Low_complexity Low_complexity 2 44 0 4 789 345 24 0 0 chr13 26821228 26821270 -93463042 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 789 1648 223 100 3 chr13 26821280 26821671 -93462641 + Lx9 LINE L1 6357 6785 -859 4 789 1622 210 39 19 chr13 26821671 26822031 -93462281 - ORR1B2 LTR MaLR 0 367 1 4 789 1912 191 11 6 chr13 26822031 26822394 -93461918 - ORR1B2-int LTR MaLR 0 1509 1145 4 789 2392 234 31 20 chr13 26822395 26822984 -93461328 + Lx9 LINE L1 6868 7462 -182 4 789 340 211 11 0 chr13 26823004 26823099 -93461213 + Lx9 LINE L1 7548 7643 -1 4 789 194 338 12 36 chr13 26823258 26823341 -93460971 - L2c LINE L2 -59 3328 3248 4 789 342 403 0 19 chr13 26823940 26824097 -93460215 + Tigger7 DNA MER2_type 5 158 -2333 4 789 1404 214 40 80 chr13 26824100 26824474 -93459838 + ORR1B1 LTR MaLR 3 361 -33 4 789 2200 191 51 75 chr13 26824474 26825110 -93459202 + BGLII_B LTR ERVK 1 507 -54 4 789 606 133 9 9 chr13 26825107 26825213 -93459099 + ORR1B1 LTR MaLR 289 394 0 4 789 266 376 42 7 chr13 26825214 26825356 -93458956 + Tigger7 DNA MER2_type 156 302 -2189 4 789 373 321 15 8 chr13 26825360 26825492 -93458820 + Tigger7 DNA MER2_type 2133 2265 -226 4 789 258 32 0 0 chr13 26825636 26825667 -93458645 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 789 454 281 26 9 chr13 26825671 26825786 -93458526 + B3 SINE B2 96 212 -4 4 789 3560 185 182 85 chr13 26825834 26826728 -93457584 + RMER12 LTR ERVK 1 1003 -319 4 789 1221 78 0 0 chr13 26826728 26826894 -93457418 + (TTTTC)n Simple_repeat Simple_repeat 5 170 0 4 789 3560 185 182 85 chr13 26826894 26827109 -93457203 + RMER12 LTR ERVK 1004 1217 -105 4 789 269 255 80 60 chr13 26828151 26828301 -93456011 - Charlie4a DNA MER1_type -311 197 45 4 789 1211 267 97 40 chr13 26828334 26828837 -93455475 + Lx9 LINE L1 7059 7590 -54 4 789 4312 78 3 12 chr13 26828863 26829432 -93454880 + LTRIS2 LTR ERV1 1 564 0 4 789 594 0 0 0 chr13 26829580 26829646 -93454666 + (GA)n Simple_repeat Simple_repeat 1 66 0 4 789 21 36 0 0 chr13 26829686 26829714 -93454598 + AT_rich Low_complexity Low_complexity 1 28 0 4 789 519 359 47 27 chr13 26830009 26830267 -93454045 - LTR82A LTR ERVL -105 767 505 4 789 589 307 114 0 chr13 26830404 26830580 -93453732 - B3 SINE B2 -14 202 7 4 789 589 278 146 15 chr13 26830607 26830881 -93453431 - LTR82A LTR ERVL -549 323 14 4 789 183 85 64 0 chr13 26833477 26833524 -93450788 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 4 789 610 284 71 0 chr13 26833885 26834040 -93450272 + B3 SINE B2 1 166 -50 4 789 252 0 0 0 chr13 26834046 26834074 -93450238 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 789 1017 219 93 77 chr13 26834679 26835046 -93449266 - ORR1D1 LTR MaLR -34 373 1 4 789 335 199 111 47 chr13 26835105 26835295 -93449017 - Zaphod DNA Tip100 -3071 960 759 4 789 397 352 37 25 chr13 26835422 26835585 -93448727 - MER2B DNA MER2_type -7 329 165 4 789 231 33 98 16 chr13 26835837 26835898 -93448414 + (TTTTG)n Simple_repeat Simple_repeat 1 66 0 4 789 254 352 119 75 chr13 26835901 26836220 -93448092 - Zaphod DNA Tip100 -3528 503 171 4 789 32 0 0 0 chr13 26837959 26837991 -93446321 + AT_rich Low_complexity Low_complexity 1 32 0 4 789 192 40 0 0 chr13 26838212 26838237 -93446075 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 4 789 351 0 0 0 chr13 26838927 26838966 -93445346 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 789 562 295 72 24 chr13 26839483 26839696 -93444616 + B4 SINE B4 8 276 -16 4 789 336 335 98 77 chr13 26840648 26840894 -93443418 - ORR1E LTR MaLR -111 259 9 4 789 2209 170 40 119 chr13 26841405 26841978 -93442334 - RLTR24 LTR ERV1 -1 528 1 4 789 865 241 21 136 chr13 26842019 26842394 -93441918 - Lx7 LINE L1 0 7696 7365 4 789 223 132 0 70 chr13 26842416 26842473 -93441839 + A-rich Low_complexity Low_complexity 3 55 0 4 789 1764 231 55 47 chr13 26842483 26843029 -93441283 - Lx7 LINE L1 -3697 2183 2021 4 789 1481 63 11 0 chr13 26843029 26843218 -93441094 - B2_Mm1t SINE B2 -2 191 1 4 789 1764 206 60 113 chr13 26843218 26843667 -93440645 - Lx7 LINE L1 -3860 2020 1556 4 789 692 351 68 51 chr13 26845460 26845796 -93438516 + ORR1E LTR MaLR 6 347 -12 4 789 296 78 39 0 chr13 26845818 26845869 -93438443 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 4 789 180 111 0 0 chr13 26845880 26845907 -93438405 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 4 789 1779 189 189 15 chr13 26845974 26846382 -93437930 + RMER19B LTR ERVK 1 479 -423 4 789 354 74 0 0 chr13 26846735 26846789 -93437523 + (A)n Simple_repeat Simple_repeat 1 54 0 4 789 213 159 0 0 chr13 26846945 26846989 -93437323 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 789 7236 82 22 2 chr13 26847580 26847644 -93436668 - L1Md_F2 LINE L1 -6 6576 6503 4 789 534 16 0 0 chr13 26847644 26847707 -93436605 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 789 29525 82 22 5 chr13 26847707 26849479 -93434833 - L1Md_F2 LINE L1 -80 6502 4735 4 789 297 51 0 0 chr13 26849479 26849518 -93434794 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 789 29525 82 24 8 chr13 26849518 26852530 -93431782 - L1Md_F2 LINE L1 -1149 4734 1643 4 789 281 58 27 80 chr13 26852707 26852782 -93431530 + A-rich Low_complexity Low_complexity 2 72 0 4 789 354 367 29 0 chr13 26852957 26853096 -93431216 + RSINE1 SINE B4 5 147 -18 4 789 550 358 35 61 chr13 26854833 26855175 -93429137 + ORR1D2 LTR MaLR 38 370 0 4 789 799 280 77 52 chr13 26855834 26856158 -93428154 + MTEa LTR MaLR 42 373 -6 4 789 24 0 0 0 chr13 26857238 26857262 -93427050 + AT_rich Low_complexity Low_complexity 1 24 0 4 789 722 71 150 0 chr13 26857494 26857607 -93426705 - L1_Mus2 LINE L1 0 6566 6437 4 789 1908 83 0 40 chr13 26857607 26857882 -93426430 + L1_Mus2 LINE L1 6163 6426 -140 4 789 459 331 26 26 chr13 26858745 26858937 -93425375 + MIRb SINE MIR 20 211 -57 4 789 1183 68 0 0 chr13 26859636 26859783 -93424529 + B1_Mus2 SINE Alu 1 147 0 4 789 369 0 0 0 chr13 26859783 26859824 -93424488 + (A)n Simple_repeat Simple_repeat 1 41 0 4 789 207 0 0 0 chr13 26860124 26860147 -93424165 + (T)n Simple_repeat Simple_repeat 1 23 0 4 789 180 111 0 0 chr13 26860644 26860671 -93423641 + (GAAA)n Simple_repeat Simple_repeat 3 29 0 4 789 258 261 0 26 chr13 26861303 26861417 -93422895 + CT-rich Low_complexity Low_complexity 2 112 0 4 789 338 0 0 23 chr13 26865442 26865485 -93418827 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 789 22 0 0 0 chr13 26865526 26865548 -93418764 + AT_rich Low_complexity Low_complexity 1 22 0 4 789 1689 256 17 15 chr13 26867082 26867490 -93416822 - MTD LTR MaLR -9 410 2 4 789 1527 311 46 21 chr13 26868072 26868633 -93415679 - Lx8 LINE L1 -92 7381 6807 4 789 960 157 61 17 chr13 26868657 26868838 -93415474 + RMER6D LTR ERVK 3 191 -529 4 789 2187 110 0 9 chr13 26868842 26869164 -93415148 - ORR1A2 LTR MaLR -8 319 1 4 98 4206 249 79 89 chr13 26869164 26871088 -93413224 - ORR1A2-int LTR MaLR 0 1963 60 4 790 5103 109 7 39 chr13 26871088 26871931 -93412381 + MusHAL1 LINE L1 905 1720 -992 4 790 800 131 14 86 chr13 26871936 26872114 -93412198 + MYSERV16_I-int LTR ERVK 1083 1313 -1013 4 790 2128 180 24 5 chr13 26872116 26872530 -93411782 - L1_Mur2 LINE L1 -685 5192 4771 4 790 6432 158 20 17 chr13 26872530 26872602 -93411710 + Lx2 LINE L1 5788 5858 -1139 5 790 432 0 0 0 chr13 26872602 26872650 -93411662 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 790 6432 158 20 17 chr13 26872650 26873782 -93410530 + Lx2 LINE L1 5859 6996 -1 5 790 6208 182 12 53 chr13 26873834 26874585 -93409727 - L1_Mm LINE L1 -194 5689 4939 5 790 1084 110 0 0 chr13 26874585 26874730 -93409582 + B1_Mus1 SINE Alu 2 146 -2 5 790 6208 182 12 53 chr13 26874730 26874954 -93409358 - L1_Mm LINE L1 -945 4938 4734 5 790 252 0 0 0 chr13 26874954 26874982 -93409330 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 5 790 6208 182 12 53 chr13 26874982 26875389 -93408923 - L1_Mm LINE L1 -1150 4733 4363 5 790 1130 211 28 22 chr13 26875389 26875644 -93408668 - RLTR20D LTR ERVK -241 293 1 5 790 497 280 87 53 chr13 26875645 26875909 -93408403 - Lx8 LINE L1 -887 6586 6314 4 790 485 338 7 0 chr13 26876171 26876310 -93408002 + ID_B1 SINE B4 84 223 -1 5 790 181 118 14 68 chr13 26877011 26877084 -93407228 + A-rich Low_complexity Low_complexity 2 70 0 5 790 505 298 15 0 chr13 26877211 26877342 -93406970 - ID_B1 SINE B4 0 224 92 5 790 32 26 0 0 chr13 26877549 26877588 -93406724 + AT_rich Low_complexity Low_complexity 1 39 0 5 790 1301 95 16 0 chr13 26877771 26877960 -93406352 + B2_Mm1t SINE B2 2 193 0 5 790 558 157 16 8 chr13 26878871 26878993 -93405319 + CT-rich Low_complexity Low_complexity 2 124 0 5 790 23 0 0 0 chr13 26879034 26879057 -93405255 + AT_rich Low_complexity Low_complexity 1 23 0 5 790 414 57 0 0 chr13 26879806 26879859 -93404453 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 5 790 300 198 42 110 chr13 26880723 26880839 -93403473 - MLT1A0 LTR MaLR -262 112 5 5 790 283 252 16 32 chr13 26881849 26881972 -93402340 + (TATATG)n Simple_repeat Simple_repeat 6 126 0 5 790 23 33 0 0 chr13 26882001 26882031 -93402281 + AT_rich Low_complexity Low_complexity 1 30 0 5 790 377 258 22 0 chr13 26882279 26882368 -93401944 - ORR1D2 LTR MaLR -279 91 1 5 790 241 232 0 55 chr13 26882607 26882680 -93401632 + GA-rich Low_complexity Low_complexity 1 69 0 5 790 381 301 34 34 chr13 26883264 26883381 -93400931 + B1F SINE Alu 16 132 -17 5 790 895 288 9 5 chr13 26883762 26883975 -93400337 + ORR1D2 LTR MaLR 7 220 -150 5 790 21 0 0 0 chr13 26883996 26884017 -93400295 + AT_rich Low_complexity Low_complexity 1 21 0 5 790 1206 89 0 11 chr13 26884039 26884220 -93400092 - L1Md_F2 LINE L1 -13 6569 6391 5 790 894 18 36 0 chr13 26884220 26884331 -93399981 + L1_Mm LINE L1 1724 1838 -4045 5 790 418 310 52 52 chr13 26884331 26884484 -93399828 + ORR1D2 LTR MaLR 215 367 -3 5 790 27 0 0 0 chr13 26884575 26884602 -93399710 + AT_rich Low_complexity Low_complexity 1 27 0 5 790 182 118 0 29 chr13 26884831 26884866 -93399446 + (ATATG)n Simple_repeat Simple_repeat 3 36 0 5 790 1313 247 31 56 chr13 26885962 26886352 -93397960 + ORR1C2 LTR MaLR 3 382 -2 5 790 2427 276 63 55 chr13 26886354 26886836 -93397476 + ORR1C2-int LTR MaLR 1 486 -884 5 790 961 139 0 0 chr13 26886836 26886980 -93397332 + B1_Mus1 SINE Alu 2 145 -3 5 790 2427 276 63 55 chr13 26886980 26887432 -93396880 + ORR1C2-int LTR MaLR 487 942 -428 5 790 3936 202 72 107 chr13 26887432 26887735 -93396577 + RMER19B LTR ERVK 1 269 -468 5 790 280 21 20 60 chr13 26887735 26887785 -93396527 + (CAAA)n Simple_repeat Simple_repeat 1 48 0 5 790 3936 161 96 44 chr13 26887785 26888389 -93395923 + RMER19B LTR ERVK 239 889 -13 5 790 1638 224 46 35 chr13 26888402 26888837 -93395475 + ORR1C2-int LTR MaLR 1070 1509 0 5 790 1495 180 75 53 chr13 26888837 26889007 -93395305 + ORR1C2 LTR MaLR 1 190 -194 5 790 423 0 0 0 chr13 26889007 26889054 -93395258 + (TC)n Simple_repeat Simple_repeat 2 48 0 5 790 1495 180 75 53 chr13 26889054 26889259 -93395053 + ORR1C2 LTR MaLR 191 384 0 5 790 189 74 0 0 chr13 26889263 26889290 -93395022 + (T)n Simple_repeat Simple_repeat 1 27 0 5 790 27404 68 1 2 chr13 26889306 26893653 -93390659 - L1Md_F2 LINE L1 -2 6580 2235 5 790 180 0 0 0 chr13 26893710 26893730 -93390582 + (T)n Simple_repeat Simple_repeat 1 20 0 5 790 667 316 20 34 chr13 26894869 26895161 -93389151 - B4A SINE B4 -4 288 1 5 790 322 280 0 0 chr13 26895170 26895245 -93389067 + ID2 SINE ID 4 78 -5 5 790 576 341 60 15 chr13 26895258 26895669 -93388643 + MER44B DNA MER2_type 1 438 -112 5 790 427 308 232 60 chr13 26896164 26896582 -93387730 + L1MEc LINE L1 176 665 -5735 5 790 287 25 0 24 chr13 26896667 26896708 -93387604 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 790 453 19 0 0 chr13 26896708 26896761 -93387551 + (TC)n Simple_repeat Simple_repeat 2 55 0 5 790 21 0 0 0 chr13 26897092 26897113 -93387199 + AT_rich Low_complexity Low_complexity 1 21 0 5 790 306 296 40 75 chr13 26897124 26897325 -93386987 + L1MEc LINE L1 1263 1456 -4944 5 790 318 292 10 0 chr13 26897338 26897434 -93386878 + L1MEc LINE L1 4168 4264 -2055 5 790 378 61 0 0 chr13 26897510 26897559 -93386753 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 790 352 276 65 52 chr13 26897605 26897632 -93386680 - RSINE1 SINE B4 -9 156 123 5 790 467 33 0 16 chr13 26897632 26897694 -93386618 + (TA)n Simple_repeat Simple_repeat 2 62 0 5 790 352 276 65 52 chr13 26897694 26897819 -93386493 - RSINE1 SINE B4 -43 122 2 5 790 27 0 0 0 chr13 26897993 26898020 -93386292 + AT_rich Low_complexity Low_complexity 1 27 0 5 790 691 294 55 0 chr13 26898222 26898423 -93385889 + Lx8 LINE L1 6248 6459 -1014 5 790 2927 231 115 74 chr13 26898406 26899131 -93385181 - L1_Mur3 LINE L1 -1377 4503 3731 5 790 1165 55 7 0 chr13 26899131 26899277 -93385035 - B1_Mm SINE Alu 0 147 1 5 790 2927 231 115 74 chr13 26899277 26899718 -93384594 - L1_Mur3 LINE L1 -2150 3730 3289 5 790 261 0 0 0 chr13 26900093 26900122 -93384190 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 790 532 258 53 59 chr13 26900160 26900329 -93383983 + RMER30 DNA MER1_type 8 175 -27 5 790 193 161 32 16 chr13 26900706 26900769 -93383543 + T-rich Low_complexity Low_complexity 1 64 0 5 790 26 30 0 0 chr13 26900776 26900809 -93383503 + AT_rich Low_complexity Low_complexity 1 33 0 5 790 729 215 248 10 chr13 26900997 26901290 -93383022 + ORR1D1 LTR MaLR 12 374 0 5 790 22 35 0 0 chr13 26901332 26901361 -93382951 + AT_rich Low_complexity Low_complexity 1 29 0 5 790 513 47 0 0 chr13 26901417 26901481 -93382831 + (TA)n Simple_repeat Simple_repeat 1 64 0 5 790 378 331 77 53 chr13 26902676 26902975 -93381337 - B4A SINE B4 -2 290 3 5 790 519 246 30 0 chr13 26904240 26904407 -93379905 + Lx9 LINE L1 7312 7483 -161 5 790 238 287 33 115 chr13 26904435 26904519 -93379793 + PB1D7 SINE Alu 9 87 -33 5 790 3560 5 2 0 chr13 26904519 26904912 -93379400 + MTA_Mm LTR MaLR 1 394 -2 5 790 238 287 33 115 chr13 26904912 26904949 -93379363 + PB1D7 SINE Alu 88 120 0 5 790 2276 124 14 0 chr13 26905013 26905367 -93378945 + L1_Mus3 LINE L1 6258 6616 -22 5 790 216 97 0 0 chr13 26905725 26905756 -93378556 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 5 790 405 0 0 0 chr13 26906442 26906487 -93377825 + (TAA)n Simple_repeat Simple_repeat 2 46 0 5 790 728 221 233 35 chr13 26907586 26907844 -93376468 - ORR1E LTR MaLR -7 352 44 5 790 1221 35 0 0 chr13 26907973 26908117 -93376195 + B1_Mm SINE Alu 2 145 -2 5 790 234 81 0 0 chr13 26908118 26908155 -93376157 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 5 790 233 224 0 79 chr13 26908155 26908218 -93376094 - Charlie25 DNA MER1_type -2344 180 123 5 790 243 324 109 29 chr13 26908355 26908530 -93375782 - MLT1J-int LTR MaLR -654 733 545 5 790 261 321 76 58 chr13 26908604 26908776 -93375536 - MLT1J-int LTR MaLR -992 395 221 5 790 634 307 32 8 chr13 26909495 26909718 -93374594 + ORR1D2 LTR MaLR 2 238 -146 5 790 40546 12 1 6 chr13 26909718 26915844 -93368468 - L1Md_A LINE L1 -57 6525 439 5 790 706 305 9 36 chr13 26915853 26916074 -93368238 + ORR1D2 LTR MaLR 156 370 0 5 790 2322 277 107 68 chr13 26916073 26916980 -93367332 + ORR1D2-int LTR MaLR 3 944 -426 5 790 1068 103 13 6 chr13 26916988 26917144 -93367168 - RMER16 LTR ERVK 0 533 377 5 790 2814 62 8 8 chr13 26917233 26917607 -93366705 - L1Md_F2 LINE L1 -12 6570 6197 5 790 439 310 27 34 chr13 26918374 26918390 -93365922 + ID_B1 SINE B4 76 219 -3 5 790 714 194 47 0 chr13 26918390 26918519 -93365793 + B1_Mur3 SINE Alu 10 144 -5 5 790 1887 112 1 42 chr13 26919055 26919369 -93364943 - RMER16 LTR ERVK -144 389 1 5 790 584 352 6 6 chr13 26919379 26919542 -93364770 + ORR1D2 LTR MaLR 63 225 -145 5 790 336 111 0 0 chr13 26919707 26919761 -93364551 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 790 501 92 0 0 chr13 26919804 26919880 -93364432 + (TG)n Simple_repeat Simple_repeat 2 77 0 5 790 253 212 10 138 chr13 26919988 26920086 -93364226 + ORR1D2 LTR MaLR 299 404 -15 5 790 1884 260 67 12 chr13 26920390 26920884 -93363428 - Lx7 LINE L1 -965 6731 6211 5 790 6273 182 52 30 chr13 26920889 26921197 -93363115 - Lx7 LINE L1 -1746 5950 5610 5 790 513 0 0 0 chr13 26921197 26921254 -93363058 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 790 531 0 0 0 chr13 26921254 26921312 -93363000 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 790 6273 203 76 45 chr13 26921312 26922752 -93361560 - Lx7 LINE L1 -271 5609 4148 5 790 37898 30 0 0 chr13 26922762 26929386 -93354926 - L1Md_T LINE L1 0 6585 1 5 790 377 97 0 31 chr13 26929386 26929450 -93354862 + (TTTC)n Simple_repeat Simple_repeat 2 63 0 5 790 927 82 6 110 chr13 26929450 26929614 -93354698 - B1_Mus1 SINE Alu 0 148 2 5 790 1642 212 16 0 chr13 26929616 26929983 -93354329 - Lx7 LINE L1 -1721 4159 3787 5 790 3980 184 23 4 chr13 26929990 26930823 -93353489 - Lx7 LINE L1 -2662 3218 2370 5 790 198 0 0 0 chr13 26931372 26931394 -93352918 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 790 890 156 14 0 chr13 26931406 26931547 -93352765 - B1_Mus1 SINE Alu -5 143 1 5 790 1452 36 0 5 chr13 26931554 26931775 -93352537 + (TTC)n Simple_repeat Simple_repeat 1 220 0 5 790 21 0 0 0 chr13 26932071 26932092 -93352220 + AT_rich Low_complexity Low_complexity 1 21 0 5 790 36029 68 1 16 chr13 26932157 26938313 -93345999 - L1Md_F2 LINE L1 0 6582 525 5 790 852 350 60 23 chr13 26938555 26938906 -93345406 - MTEa LTR MaLR 0 379 16 5 790 333 0 0 0 chr13 26938964 26939001 -93345311 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 790 336 302 40 13 chr13 26939191 26939342 -93344970 + L1MB1 LINE L1 6013 6167 -1 5 790 68 24 0 0 chr13 26939499 26939581 -93344731 + AT_rich Low_complexity Low_complexity 1 82 0 5 790 477 120 0 0 chr13 26940340 26940432 -93343880 + (TC)n Simple_repeat Simple_repeat 1 92 0 5 790 495 0 0 0 chr13 26940432 26940487 -93343825 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 790 410 297 8 30 chr13 26940520 26940652 -93343660 - B3A SINE B2 -69 129 1 5 790 2566 173 59 18 chr13 26940847 26941354 -93342958 + RMER4B LTR ERVK 1 528 -57 5 790 859 223 45 28 chr13 26942078 26942230 -93342082 + Lx9 LINE L1 7329 7482 -162 5 790 441 0 0 0 chr13 26942230 26942279 -93342033 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 790 859 223 45 28 chr13 26942279 26942416 -93341896 + Lx9 LINE L1 7483 7622 -22 5 790 460 308 107 27 chr13 26942640 26942827 -93341485 + ID_B1 SINE B4 12 213 -11 5 790 198 0 0 0 chr13 26942853 26942875 -93341437 + (A)n Simple_repeat Simple_repeat 1 22 0 5 790 495 48 0 0 chr13 26943452 26943514 -93340798 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 790 420 20 0 0 chr13 26943515 26943564 -93340748 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 790 495 304 61 24 chr13 26944168 26944333 -93339979 + B3 SINE B2 39 209 -7 6 790 295 29 0 0 chr13 26944407 26944442 -93339870 - L1Md_F3 LINE L1 -137 6447 6413 6 790 6344 50 6 1 chr13 26945265 26946050 -93338262 - L1Md_F3 LINE L1 0 6584 5796 6 790 596 305 84 15 chr13 26946887 26947090 -93337222 + MTEa LTR MaLR 4 220 -159 6 790 1698 70 0 0 chr13 26947256 26947484 -93336828 + L1_Mus4 LINE L1 6092 6319 -317 6 790 3385 152 69 39 chr13 26947488 26948111 -93336201 - RLTR26 LTR ERVK 0 642 1 6 790 1448 157 3 108 chr13 26948111 26948446 -93335866 + L1_Mus4 LINE L1 6330 6629 -7 6 790 21 71 0 0 chr13 26950238 26950280 -93334032 + AT_rich Low_complexity Low_complexity 1 42 0 6 790 197 420 9 0 chr13 26951152 26951264 -93333048 - MIR3 SINE MIR -7 201 89 6 790 5499 204 10 13 chr13 26952000 26953663 -93330649 + Lx4B LINE L1 5289 7041 -17 6 790 29 0 0 0 chr13 26954039 26954068 -93330244 + AT_rich Low_complexity Low_complexity 1 29 0 6 790 185 360 143 8 chr13 26954413 26954539 -93329773 + L2a LINE L2 3263 3405 -21 6 790 410 351 79 49 chr13 26955192 26955521 -93328791 - MER44B DNA MER2_type -8 542 204 6 790 207 0 0 0 chr13 26955578 26955601 -93328711 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 790 483 18 0 0 chr13 26955601 26955656 -93328656 + (GA)n Simple_repeat Simple_repeat 2 57 0 6 790 436 337 100 35 chr13 26955663 26955863 -93328449 + ID_B1 SINE B4 11 223 -1 6 790 243 294 35 0 chr13 26955867 26955952 -93328360 - MER44B DNA MER2_type -437 113 26 6 790 394 269 21 0 chr13 26956445 26956538 -93327774 + ORR1E LTR MaLR 3 97 -262 6 790 1259 195 94 34 chr13 26956541 26956838 -93327474 + RLTR46 LTR ERVK 1 315 -5 6 790 2062 131 18 59 chr13 26957036 26957377 -93326935 + ORR1A2 LTR MaLR 1 327 0 6 790 1780 184 20 63 chr13 26957392 26957787 -93326525 + ORR1C1 LTR MaLR 1 378 0 6 790 2945 51 51 0 chr13 26958450 26958821 -93325491 - RLTR10 LTR ERVK 0 390 1 6 790 22 0 0 0 chr13 26962036 26962058 -93322254 + GC_rich Low_complexity Low_complexity 1 22 0 6 790 3255 37 37 0 chr13 26962253 26962655 -93321657 + L1Md_F3 LINE L1 6168 6584 0 6 790 370 184 92 0 chr13 26963796 26963872 -93320440 + ORR1D2 LTR MaLR 288 370 0 6 790 21 36 0 0 chr13 26966139 26966167 -93318145 + AT_rich Low_complexity Low_complexity 1 28 0 6 790 305 100 20 0 chr13 26966367 26966417 -93317895 + (TTTTC)n Simple_repeat Simple_repeat 4 54 0 6 790 1135 88 0 0 chr13 26966417 26966564 -93317748 - B1_Mus2 SINE Alu 0 147 1 6 790 228 253 0 0 chr13 26966641 26966732 -93317580 + (TG)n Simple_repeat Simple_repeat 1 91 0 6 790 718 343 28 31 chr13 26966761 26967047 -93317265 - B4A SINE B4 -6 286 2 6 790 6405 85 13 1 chr13 26967559 26968480 -93315832 - L1_Mus3 LINE L1 -5 6633 5702 6 790 413 300 71 97 chr13 26968551 26968832 -93315480 + MLT1E2 LTR MaLR 3 343 -162 6 790 275 232 0 0 chr13 26969010 26969066 -93315246 - Lx8 LINE L1 -199 7274 7219 6 790 490 329 7 49 chr13 26969242 26969386 -93314926 + RSINE1 SINE B4 26 163 -2 6 790 205 200 0 0 chr13 26969408 26969448 -93314864 + (TAA)n Simple_repeat Simple_repeat 3 42 0 6 790 219 356 88 22 chr13 26969797 26969978 -93314334 + L2 LINE L2 715 907 -2512 6 790 4273 171 62 64 chr13 26970126 26971030 -93313282 - RMER19B LTR ERVK 0 902 1 6 790 279 114 0 0 chr13 26972367 26972411 -93311901 + (ATG)n Simple_repeat Simple_repeat 1 44 0 6 790 5881 52 3 3 chr13 26972780 26973518 -93310794 + L1Md_F2 LINE L1 5845 6582 0 6 790 733 186 15 23 chr13 26977758 26977890 -93306422 - B1_Mur1 SINE Alu -7 142 12 6 790 32 26 0 0 chr13 26979746 26979785 -93304527 + AT_rich Low_complexity Low_complexity 1 39 0 6 790 1561 278 5 21 chr13 26979931 26980357 -93303955 - Lx5 LINE L1 0 7050 6632 6 790 330 353 24 85 chr13 26980398 26980562 -93303750 + B4A SINE B4 1 154 -138 6 790 820 138 0 19 chr13 26980649 26980677 -93303635 + polypyrimidine Low_complexity Low_complexity 128 154 0 6 790 1069 123 0 11 chr13 26980677 26980858 -93303454 + (TTC)n Simple_repeat Simple_repeat 1 179 0 6 790 820 138 0 19 chr13 26980858 26980911 -93303401 + polypyrimidine Low_complexity Low_complexity 75 127 0 6 790 1155 107 0 0 chr13 26980911 26981089 -93303223 + (TCC)n Simple_repeat Simple_repeat 3 180 0 6 790 820 138 0 19 chr13 26981089 26981161 -93303151 + polypyrimidine Low_complexity Low_complexity 3 74 0 6 790 399 41 0 0 chr13 26981152 26981201 -93303111 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 790 203 0 37 0 chr13 26981201 26981228 -93303084 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 790 363 23 0 0 chr13 26981301 26981345 -93302967 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 790 546 16 0 0 chr13 26981345 26981407 -93302905 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 790 533 318 26 0 chr13 26982148 26982337 -93301975 - MLT1A0 LTR MaLR -2 363 170 6 790 1922 196 42 7 chr13 26982509 26982916 -93301396 - MTC LTR MaLR 0 421 1 6 790 582 313 18 40 chr13 26982991 26983165 -93301147 + MT2B LTR ERVL 381 552 -49 6 790 386 69 17 0 chr13 26983165 26983223 -93301089 + (TATG)n Simple_repeat Simple_repeat 1 59 0 6 790 582 313 18 40 chr13 26983223 26983274 -93301038 + MT2B LTR ERVL 553 601 0 6 790 1982 258 149 12 chr13 26983346 26984086 -93300226 - Lx5 LINE L1 -5 7053 6174 6 790 1726 147 8 124 chr13 26984087 26984459 -93299853 + ORR1A4 LTR MaLR 1 329 0 6 790 2893 199 72 58 chr13 26984459 26985254 -93299058 + ORR1A4-int LTR MaLR 1 806 -1157 6 790 564 202 0 19 chr13 26985168 26985183 -93299129 + MT2B LTR ERVL 152 164 -437 6 790 347 216 105 76 chr13 26985183 26985288 -93299024 + B1_Mur3 SINE Alu 3 110 -39 6 790 323 221 59 0 chr13 26985290 26985358 -93298954 - MT2B LTR ERVL -334 267 196 6 790 340 271 106 0 chr13 26985301 26985386 -93298926 - B1_Mur3 SINE Alu -46 103 10 6 790 227 326 85 21 chr13 26985319 26985413 -93298899 - ID_B1 SINE B4 -67 157 58 6 790 2523 194 33 13 chr13 26985460 26986217 -93298095 - Lx5 LINE L1 -970 6080 5291 6 790 261 0 0 0 chr13 26986217 26986246 -93298066 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 6 790 1725 192 10 0 chr13 26986246 26986554 -93297758 - Lx4A LINE L1 -18 7040 6730 6 790 5367 236 39 25 chr13 26986554 26988142 -93296170 + MERVL_2A-int LTR ERVL 761 2435 -3326 6 790 2678 203 59 5 chr13 26988122 26988696 -93295616 + MERVL_2A-int LTR ERVL 3975 4579 -1182 6 790 7737 43 2 2 chr13 26988696 26989691 -93294621 - L1Md_F2 LINE L1 0 6582 5588 6 790 4801 181 60 20 chr13 26989697 26990709 -93293603 + MERVL_2A-int LTR ERVL 4566 5618 -143 6 790 240 278 20 40 chr13 26990709 26990810 -93293502 + ORR1A3-int LTR MaLR 559 657 -1306 6 790 225 105 0 26 chr13 26990809 26990848 -93293464 + ORR1A3-int LTR MaLR 1061 1098 0 6 790 380 262 9 36 chr13 26990848 26990959 -93293353 + MT2A LTR ERVL 1 108 -425 6 790 643 93 0 9 chr13 26990991 26991100 -93293212 + L1_Mus4 LINE L1 6525 6632 -4 6 790 1701 58 13 0 chr13 26991332 26991558 -93292754 - L1Md_F2 LINE L1 0 6582 6354 6 790 1572 280 122 50 chr13 26991934 26992034 -93292278 - Lx7 LINE L1 -47 7649 7551 6 790 414 0 0 0 chr13 26992034 26992080 -93292232 + (TAA)n Simple_repeat Simple_repeat 3 48 0 6 790 1572 280 122 50 chr13 26992080 26992202 -93292110 - Lx7 LINE L1 -146 7550 7397 6 790 509 0 16 0 chr13 26992202 26992263 -93292049 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 6 790 1572 280 122 50 chr13 26992263 26992818 -93291494 - Lx7 LINE L1 -300 7396 6818 6 790 5488 34 3 0 chr13 26993419 26994072 -93290240 - L1Md_F3 LINE L1 -2 6582 5928 6 790 186 43 0 0 chr13 26994261 26994284 -93290028 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 6 790 474 18 0 0 chr13 26994413 26994468 -93289844 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 6 790 955 97 7 0 chr13 26994473 26994618 -93289694 - L1_Mus2 LINE L1 -1 6565 6420 6 790 352 45 0 0 chr13 26994623 26994667 -93289645 - Lx3_Mus LINE L1 -1307 5702 5659 6 790 7782 92 63 14 chr13 26994664 26995272 -93289040 + Lx3_Mus LINE L1 5684 6354 -655 6 790 3366 25 8 0 chr13 26995272 26995665 -93288647 + MTA_Mm LTR MaLR 1 396 0 6 790 7782 92 63 14 chr13 26995665 26996320 -93287992 + Lx3_Mus LINE L1 6355 7009 0 6 790 270 0 0 0 chr13 26996646 26996676 -93287636 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6 790 519 212 22 15 chr13 26996685 26996819 -93287493 - Lx7 LINE L1 -15 7681 7547 6 790 189 0 0 0 chr13 26996820 26996841 -93287471 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 6 790 1670 40 8 62 chr13 26996841 26997081 -93287231 + L1Md_F3 LINE L1 6356 6582 -2 6 790 581 316 131 21 chr13 26997081 26997272 -93287040 + B4A SINE B4 81 292 0 6 790 699 181 134 0 chr13 26997292 26997419 -93286893 - B1_Mus1 SINE Alu -3 145 2 6 790 192 111 0 0 chr13 26997635 26997671 -93286641 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 6 790 2060 249 36 114 chr13 26997689 26997840 -93286472 - Lx7 LINE L1 -153 7543 7400 6 790 216 0 0 0 chr13 26997840 26997864 -93286448 + (CACTA)n Simple_repeat Simple_repeat 1 24 0 6 790 2060 249 36 114 chr13 26997864 26997911 -93286401 - Lx7 LINE L1 -297 7399 7363 6 790 342 0 0 0 chr13 26997911 26997949 -93286363 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 790 2060 249 36 114 chr13 26997949 26997965 -93286347 - Lx7 LINE L1 -334 7362 7362 6 790 207 0 0 0 chr13 26997965 26997988 -93286324 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 790 2060 249 36 114 chr13 26997988 26998636 -93285676 - Lx7 LINE L1 -334 7362 6748 6 790 180 125 0 0 chr13 26998713 26998745 -93285567 + (TTAA)n Simple_repeat Simple_repeat 4 35 0 6 790 306 299 65 7 chr13 26999499 26999637 -93284675 + B1F1 SINE Alu 3 148 -1 6 790 25 0 0 0 chr13 27000287 27000312 -93284000 + AT_rich Low_complexity Low_complexity 1 25 0 1 98 1566 225 46 63 chr13 27000567 27000980 -93283332 - MTD LTR MaLR -13 406 1 2 791 649 375 41 4 chr13 27000980 27001210 -93283102 + B4 SINE B4 46 284 -8 3 791 216 111 0 0 chr13 27001235 27001271 -93283041 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 791 252 100 0 0 chr13 27001352 27001392 -93282920 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 791 255 310 0 14 chr13 27002125 27002197 -93282115 + Tigger5 DNA MER2_type 2313 2383 -23 6 791 327 311 78 10 chr13 27003531 27003679 -93280633 + HAL1-3A_ME LINE L1 2668 2791 -67 7 791 544 293 18 82 chr13 27003703 27003874 -93280438 + B4A SINE B4 3 162 -130 8 791 289 347 0 0 chr13 27005064 27005139 -93279173 + ID2 SINE ID 9 83 0 9 791 259 413 57 41 chr13 27005349 27005594 -93278718 - MLT1L LTR MaLR -205 405 157 1 791 33 0 0 0 chr13 27006034 27006067 -93278245 + AT_rich Low_complexity Low_complexity 1 33 0 1 791 222 43 85 0 chr13 27006105 27006152 -93278160 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 791 251 306 141 31 chr13 27006226 27006354 -93277958 + Charlie12 DNA MER1_type 28 169 -2704 1 791 317 304 208 0 chr13 27009690 27009928 -93274384 - L1MB7 LINE L1 -141 6043 5757 1 791 538 316 64 5 chr13 27009995 27010183 -93274129 - MTE2b LTR MaLR 0 379 181 1 791 3764 178 3 6 chr13 27010295 27010966 -93273346 + Lx2 LINE L1 6328 6996 -1 1 791 828 101 0 0 chr13 27011065 27011203 -93273109 + (TG)n Simple_repeat Simple_repeat 2 139 0 1 791 328 262 11 45 chr13 27011203 27011291 -93273021 - ID_B1 SINE B4 -53 171 87 1 791 21 0 0 0 chr13 27011447 27011468 -93272844 + AT_rich Low_complexity Low_complexity 1 21 0 1 791 2772 70 10 37 chr13 27011516 27011919 -93272393 + L1Md_F2 LINE L1 6179 6570 -12 2 791 206 217 0 0 chr13 27012477 27012523 -93271789 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 2 791 1154 281 31 66 chr13 27012553 27012903 -93271409 + ORR1E LTR MaLR 8 345 -14 2 791 519 333 17 17 chr13 27013128 27013305 -93271007 + B4A SINE B4 106 282 -10 2 791 6330 218 47 23 chr13 27015460 27018028 -93266284 - Lx6 LINE L1 -345 7115 4473 2 791 1669 165 34 19 chr13 27018028 27018349 -93265963 - Lx LINE L1 -2 6652 6327 2 791 6330 227 49 110 chr13 27018349 27019376 -93264936 - Lx6 LINE L1 -1408 4472 3712 2 791 1447 186 197 42 chr13 27019376 27019762 -93264550 + RLTR41 LTR ERV1 1 446 0 2 791 5997 229 49 114 chr13 27019762 27020516 -93263796 - Lx6 LINE L1 -2166 3711 2935 2 791 3184 200 65 90 chr13 27020512 27021843 -93262469 - Lx6 LINE L1 -3729 2151 860 2 791 251 284 70 44 chr13 27022703 27022817 -93261495 + Charlie25 DNA MER1_type 159 275 -2249 2 791 192 179 25 25 chr13 27022945 27022985 -93261327 - L3 LINE CR1 -465 4024 3985 2 791 677 98 0 9 chr13 27025344 27025457 -93258855 + (TA)n Simple_repeat Simple_repeat 2 113 0 2 791 225 0 0 0 chr13 27026560 27026585 -93257727 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 791 1417 303 47 20 chr13 27026595 27027043 -93257269 - MT2A LTR ERVL -72 461 2 3 791 891 248 41 112 chr13 27027249 27027544 -93256768 + ORR1E LTR MaLR 9 282 -77 3 791 206 62 31 0 chr13 27028205 27028237 -93256075 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 3 791 1143 74 0 20 chr13 27028237 27028377 -93255935 - B1_Mus1 SINE Alu -9 139 1 3 791 37 52 0 0 chr13 27028467 27028525 -93255787 + AT_rich Low_complexity Low_complexity 1 58 0 3 791 4477 104 12 5 chr13 27028620 27029275 -93255037 + Lx3_Mus LINE L1 6346 7005 -4 3 791 23 54 0 0 chr13 27029276 27029313 -93254999 + AT_rich Low_complexity Low_complexity 1 37 0 3 791 1666 181 74 14 chr13 27030762 27031115 -93253197 + RMER1C Other Other 968 1341 -1 3 791 1783 74 31 4 chr13 27031115 27031372 -93252940 - L1_Mus3 LINE L1 -10 6628 6365 3 791 325 312 30 52 chr13 27033127 27033262 -93251050 - MLT1H LTR MaLR -16 533 402 4 791 297 0 0 0 chr13 27033417 27033450 -93250862 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 4 791 22 0 0 0 chr13 27033737 27033759 -93250553 + AT_rich Low_complexity Low_complexity 1 22 0 4 791 254 310 0 0 chr13 27033800 27033887 -93250425 - MER34 LTR ERV1 -76 466 380 4 791 498 96 0 0 chr13 27034909 27034982 -93249330 + (TG)n Simple_repeat Simple_repeat 1 73 0 4 791 357 322 25 8 chr13 27035160 27035282 -93249030 - B1F1 SINE Alu -5 144 21 4 791 285 247 11 11 chr13 27035796 27035886 -93248426 + (CA)n Simple_repeat Simple_repeat 1 90 0 4 791 267 218 0 0 chr13 27038490 27038545 -93245767 + MLT1A1 LTR MaLR 338 392 -16 4 791 600 279 35 70 chr13 27038992 27039537 -93244775 + RLTR11B LTR ERVK 7 496 -32 4 791 266 380 10 10 chr13 27039804 27039905 -93244407 + RSINE1 SINE B4 46 146 -19 4 791 248 319 69 48 chr13 27040799 27040944 -93243368 + MIRb SINE MIR 64 211 -57 5 791 973 320 62 20 chr13 27042034 27042391 -93241921 + MTD LTR MaLR 48 419 0 5 791 186 322 0 0 chr13 27042431 27042490 -93241822 - MIR SINE MIR -144 118 60 5 791 285 393 20 20 chr13 27044272 27044420 -93239892 - MIR SINE MIR -98 164 17 5 791 669 315 74 80 chr13 27045478 27045830 -93238482 + ORR1E LTR MaLR 4 353 -6 5 791 5762 77 7 6 chr13 27046136 27046956 -93237356 + L1Md_F2 LINE L1 4752 5572 -311 5 791 7704 58 6 8 chr13 27046957 27047942 -93236370 + L1Md_F2 LINE L1 5591 6573 -9 5 791 498 103 0 0 chr13 27048284 27048371 -93235941 + (GA)n Simple_repeat Simple_repeat 1 87 0 5 791 23 0 0 0 chr13 27048451 27048474 -93235838 + AT_rich Low_complexity Low_complexity 1 23 0 5 791 660 263 64 59 chr13 27048482 27048684 -93235628 - B3 SINE B2 -13 203 1 5 791 341 239 117 18 chr13 27050006 27050117 -93234195 + MIR3 SINE MIR 86 207 -1 5 791 21 0 0 0 chr13 27051293 27051314 -93232998 + AT_rich Low_complexity Low_complexity 1 21 0 6 791 450 49 0 0 chr13 27052441 27052502 -93231810 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 791 414 0 0 0 chr13 27052502 27052547 -93231765 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 791 388 320 48 0 chr13 27052556 27052659 -93231653 - B3A SINE B2 -51 147 40 6 791 18578 77 7 2 chr13 27052675 27056024 -93228288 - L1Md_F2 LINE L1 0 6582 3215 6 791 189 120 48 48 chr13 27056970 27057075 -93227237 + (TTATA)n Simple_repeat Simple_repeat 5 109 0 6 791 339 355 12 37 chr13 27057105 27057269 -93227043 + RSINE1 SINE B4 2 161 -4 6 791 569 283 181 54 chr13 27057273 27057380 -93226932 + ORR1D2 LTR MaLR 6 125 -234 6 791 1098 69 14 7 chr13 27057380 27057526 -93226786 - B1_Mm SINE Alu 0 147 1 6 791 704 259 86 14 chr13 27057526 27057732 -93226580 + ORR1D2 LTR MaLR 126 363 -7 6 791 226 190 17 17 chr13 27057772 27057831 -93226481 - L1M4 LINE L1 -768 5378 5320 6 791 341 284 18 18 chr13 27057861 27058026 -93226286 + (TA)n Simple_repeat Simple_repeat 1 165 0 7 791 4532 31 56 4 chr13 27058956 27059512 -93224800 - L1Md_F3 LINE L1 -14 6570 5986 7 791 401 120 54 36 chr13 27059706 27059818 -93224494 + (CATATA)n Simple_repeat Simple_repeat 3 116 0 7 791 411 21 0 0 chr13 27060260 27060308 -93224004 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 791 21 36 0 0 chr13 27060308 27060336 -93223976 + AT_rich Low_complexity Low_complexity 1 28 0 7 791 1550 176 18 4 chr13 27060344 27060624 -93223688 - Lx LINE L1 0 6654 6371 7 791 2595 161 22 0 chr13 27063768 27064228 -93220084 + Lx3B LINE L1 6504 6973 0 7 791 216 191 0 0 chr13 27064228 27064275 -93220037 + A-rich Low_complexity Low_complexity 1 47 0 7 791 648 271 48 43 chr13 27064833 27065041 -93219271 + B3 SINE B2 8 216 0 7 791 803 273 0 5 chr13 27065533 27065750 -93218562 - B3 SINE B2 0 216 1 7 791 527 297 31 0 chr13 27066051 27066179 -93218133 + RSINE1 SINE B4 29 160 -5 8 791 1630 74 0 0 chr13 27067382 27067597 -93216715 - L1_Mus2 LINE L1 -1 6565 6351 8 791 350 211 250 25 chr13 27067773 27067933 -93216379 - Lx9 LINE L1 -40 7604 7409 8 791 384 314 44 60 chr13 27068947 27069130 -93215182 + B3A SINE B2 3 182 -16 8 791 264 170 0 0 chr13 27069130 27069183 -93215129 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 791 562 299 49 59 chr13 27069961 27070249 -93214063 + B4A SINE B4 2 286 -6 8 791 186 43 0 0 chr13 27071963 27071986 -93212326 + (CAA)n Simple_repeat Simple_repeat 2 24 0 8 791 356 312 26 84 chr13 27072782 27072936 -93211376 + RSINE1 SINE B4 20 164 -1 8 791 597 49 0 0 chr13 27072936 27073017 -93211295 + (GA)n Simple_repeat Simple_repeat 2 82 0 8 791 256 164 36 0 chr13 27073022 27073077 -93211235 + (CAGAGA)n Simple_repeat Simple_repeat 6 62 0 8 791 41 21 0 0 chr13 27073095 27073143 -93211169 + AT_rich Low_complexity Low_complexity 1 48 0 9 791 270 0 0 0 chr13 27073343 27073373 -93210939 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 9 791 21 0 0 0 chr13 27074011 27074032 -93210280 + AT_rich Low_complexity Low_complexity 1 21 0 9 791 216 158 0 0 chr13 27074447 27074485 -93209827 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 791 351 225 41 83 chr13 27074534 27074655 -93209657 + PB1D10 SINE Alu 1 116 -1 9 791 3717 50 0 4 chr13 27074720 27075184 -93209128 - L1Md_F2 LINE L1 -12 6570 6109 9 791 252 302 34 34 chr13 27075608 27075697 -93208615 - MLT1A LTR MaLR -2 363 275 9 791 348 224 204 37 chr13 27075712 27075874 -93208438 - MLT1A LTR MaLR -158 216 28 9 791 488 241 42 42 chr13 27075884 27076027 -93208285 - B1_Mur2 SINE Alu -6 143 1 9 791 261 300 29 20 chr13 27076422 27076524 -93207788 + MER5A DNA MER1_type 87 189 0 9 791 21 0 0 0 chr13 27076611 27076632 -93207680 + AT_rich Low_complexity Low_complexity 1 21 0 9 791 213 94 0 0 chr13 27077747 27077779 -93206533 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1 791 270 280 0 13 chr13 27079980 27080056 -93204256 + GA-rich Low_complexity Low_complexity 1 75 0 1 791 229 169 17 17 chr13 27080075 27080135 -93204177 + GA-rich Low_complexity Low_complexity 1 60 0 1 791 323 310 67 28 chr13 27080338 27080517 -93203795 - MIRb SINE MIR -79 189 4 1 791 1319 218 26 10 chr13 27080556 27080866 -93203446 + RLTR28B LTR ERVL 1 315 -166 1 791 6968 62 1 0 chr13 27080866 27081734 -93202578 + L1_Mus1 LINE L1 5699 6567 0 1 791 485 142 8 94 chr13 27081746 27081782 -93202530 + RLTR28B LTR ERVL 301 332 -149 1 791 243 0 0 0 chr13 27081782 27081809 -93202503 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 791 485 142 8 94 chr13 27081809 27081879 -93202433 + RLTR28B LTR ERVL 333 399 -82 1 791 2402 48 10 3 chr13 27081879 27082193 -93202119 + L1Md_F2 LINE L1 6267 6582 0 1 791 207 100 0 0 chr13 27082207 27082237 -93202075 + (A)n Simple_repeat Simple_repeat 1 30 0 1 791 1675 224 0 129 chr13 27082582 27083063 -93201249 + RMER15 LTR ERVL 27 445 -130 1 791 452 252 33 8 chr13 27083602 27083722 -93200590 + RMER15 LTR ERVL 435 557 -18 1 791 193 311 21 53 chr13 27083766 27083861 -93200451 - L4 LINE RTE -1662 367 276 1 791 258 333 11 95 chr13 27084075 27084264 -93200048 - MLT1A LTR MaLR -138 236 64 1 791 285 246 92 0 chr13 27084271 27084336 -93199976 + ID4 SINE ID 8 78 -5 1 791 247 342 57 24 chr13 27084336 27084394 -93199918 + ID_B1 SINE B4 8 134 -90 1 791 604 244 63 78 chr13 27086391 27086582 -93197730 - MTEa LTR MaLR -191 188 1 1 791 23 54 0 0 chr13 27086726 27086763 -93197549 + AT_rich Low_complexity Low_complexity 1 37 0 1 791 1362 91 5 5 chr13 27086896 27087094 -93197218 - MTB LTR MaLR 0 400 203 1 791 286 281 24 12 chr13 27087161 27087244 -93197068 + B1F1 SINE Alu 49 132 -17 1 791 180 0 0 0 chr13 27087254 27087274 -93197038 + (GA)n Simple_repeat Simple_repeat 1 20 0 1 791 1839 160 3 10 chr13 27087790 27088100 -93196212 - RLTR10E LTR ERVK -3 308 1 1 791 336 385 28 0 chr13 27089174 27089317 -93194995 - MLT1J2 LTR MaLR -238 210 64 1 791 534 266 31 1 chr13 27089403 27089563 -93194749 - MIRb SINE MIR -81 187 24 1 791 322 279 140 4 chr13 27090770 27090877 -93193435 + B3 SINE B2 3 125 -68 1 791 486 0 0 0 chr13 27090894 27090948 -93193364 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 791 369 0 0 0 chr13 27090968 27091009 -93193303 + (TAA)n Simple_repeat Simple_repeat 3 43 0 1 791 593 327 39 0 chr13 27091025 27091233 -93193079 - B3 SINE B2 0 216 1 1 791 335 205 157 35 chr13 27091265 27091334 -93192978 - L1_Mur3 LINE L1 -2727 3153 3080 1 791 1578 12 0 0 chr13 27091334 27091592 -93192720 + (TTC)n Simple_repeat Simple_repeat 1 258 0 1 791 335 205 157 35 chr13 27091592 27091613 -93192699 - L1_Mur3 LINE L1 -2801 3079 3049 1 791 783 115 0 0 chr13 27091613 27091743 -93192569 + (CTA)n Simple_repeat Simple_repeat 3 132 0 1 791 335 205 157 35 chr13 27091743 27091822 -93192490 - L1_Mur3 LINE L1 -2832 3048 2963 1 791 231 295 135 8 chr13 27092248 27092381 -93191931 - MIRb SINE MIR -1 267 118 1 791 307 389 68 34 chr13 27093577 27093868 -93190444 + ORR1E LTR MaLR 16 318 -41 1 791 6112 60 1 3 chr13 27093868 27094641 -93189671 - L1Md_F2 LINE L1 -12 6570 5799 1 791 307 389 68 34 chr13 27094641 27094674 -93189638 + ORR1E LTR MaLR 319 350 -9 1 791 847 268 101 25 chr13 27094965 27095324 -93188988 - MLT2C2 LTR ERVL -48 366 1 1 791 609 358 54 37 chr13 27095867 27096221 -93188091 - MER77 LTR ERVL 0 607 248 1 791 253 356 66 25 chr13 27096486 27096607 -93187705 - MIRb SINE MIR -20 248 123 1 791 506 275 45 39 chr13 27096825 27096920 -93187392 - RLTR20C LTR ERVK 0 578 490 1 791 597 124 0 0 chr13 27096920 27097017 -93187295 + (CA)n Simple_repeat Simple_repeat 2 98 0 1 791 506 275 45 39 chr13 27097017 27097076 -93187236 - RLTR20C LTR ERVK -89 489 424 1 791 678 210 110 12 chr13 27097118 27097282 -93187030 - RLTR20C LTR ERVK -354 180 1 1 791 23 0 0 0 chr13 27097675 27097698 -93186614 + AT_rich Low_complexity Low_complexity 1 23 0 1 791 5818 58 0 0 chr13 27097698 27098435 -93185877 - L1_Mm LINE L1 -423 5460 4724 1 791 1889 57 0 0 chr13 27098435 27098665 -93185647 + L1_Mm LINE L1 5463 5692 -191 1 791 888 198 0 15 chr13 27099394 27099663 -93184649 + CT-rich Low_complexity Low_complexity 1 264 0 1 791 308 243 29 76 chr13 27099663 27099781 -93184531 - B1F SINE Alu -22 127 12 1 791 22 0 0 0 chr13 27100334 27100356 -93183956 + AT_rich Low_complexity Low_complexity 1 22 0 1 791 195 42 0 0 chr13 27100404 27100428 -93183884 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 791 198 0 0 0 chr13 27101167 27101189 -93183123 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 791 636 320 109 45 chr13 27101786 27102182 -93182130 + Tigger6a DNA MER2_type 17 437 -646 1 791 567 241 0 0 chr13 27102860 27102972 -93181340 - B1_Mur2 SINE Alu -37 112 1 1 791 396 0 0 0 chr13 27104863 27104907 -93179405 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 791 5768 189 43 4 chr13 27105624 27106804 -93177508 + Lx4A LINE L1 5818 7043 -15 1 791 509 0 0 16 chr13 27106805 27106867 -93177445 + (TAA)n Simple_repeat Simple_repeat 2 62 0 1 791 636 38 0 0 chr13 27107498 27107577 -93176735 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 791 234 0 0 0 chr13 27107604 27107630 -93176682 + (TAAAA)n Simple_repeat Simple_repeat 1 26 0 1 791 21 71 0 0 chr13 27107703 27107745 -93176567 + AT_rich Low_complexity Low_complexity 1 42 0 1 791 281 215 28 46 chr13 27108697 27108816 -93175496 - L1_Mur3 LINE L1 -379 5777 5662 1 791 670 306 31 31 chr13 27108862 27109054 -93175258 - B3A SINE B2 -5 193 2 1 791 468 0 0 0 chr13 27109098 27109150 -93175162 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 791 329 300 32 42 chr13 27109334 27109528 -93174784 - L1_Mur3 LINE L1 -746 5545 5318 1 791 8171 32 9 2 chr13 27109531 27110703 -93173609 - L1Md_F3 LINE L1 -14 6570 5390 1 791 1876 242 89 90 chr13 27110716 27111437 -93172875 + MMAR1 DNA Mariner 555 1274 -12 1 791 375 23 0 0 chr13 27111437 27111481 -93172831 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 791 414 0 0 0 chr13 27111481 27111526 -93172786 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 791 268 281 112 40 chr13 27111578 27111730 -93172582 - Tigger13a DNA MER2_type -398 373 211 1 791 295 320 91 97 chr13 27112715 27112963 -93171349 + MTEa LTR MaLR 101 363 -16 1 791 23 33 0 0 chr13 27113791 27113821 -93170491 + AT_rich Low_complexity Low_complexity 1 30 0 1 791 265 290 231 38 chr13 27115104 27115290 -93169022 + ID_B1 SINE B4 2 223 -1 1 791 1184 68 0 7 chr13 27115297 27115454 -93168858 + L1Md_F2 LINE L1 5445 5614 -560 1 791 7820 57 2 4 chr13 27115455 27116451 -93167861 + L1Md_F2 LINE L1 5587 6580 -2 1 791 22 0 0 0 chr13 27116451 27116473 -93167839 + AT_rich Low_complexity Low_complexity 1 22 0 1 791 22 56 0 0 chr13 27116762 27116798 -93167514 + AT_rich Low_complexity Low_complexity 1 36 0 1 791 501 136 0 0 chr13 27116798 27116901 -93167411 + (GA)n Simple_repeat Simple_repeat 2 104 0 1 791 832 271 92 55 chr13 27117970 27118322 -93165990 + MTD LTR MaLR 46 399 -20 1 791 441 83 0 35 chr13 27119761 27119848 -93164464 + (CAAAA)n Simple_repeat Simple_repeat 2 85 0 1 791 359 308 17 17 chr13 27120038 27120213 -93164099 + (TATG)n Simple_repeat Simple_repeat 2 176 0 1 791 267 277 46 0 chr13 27120319 27120384 -93163928 - B4A SINE B4 -215 77 10 1 791 4211 161 133 71 chr13 27120448 27121178 -93163134 + RLTR25B LTR ERVK 3 820 -208 1 791 302 0 26 0 chr13 27121178 27121216 -93163096 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 791 339 25 0 0 chr13 27121216 27121255 -93163057 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 791 4211 166 63 38 chr13 27121255 27121299 -93163013 + RLTR25B LTR ERVK 821 868 -160 1 791 1365 29 0 0 chr13 27121299 27121469 -93162843 + (GGGAA)n Simple_repeat Simple_repeat 4 173 0 1 791 4211 166 63 38 chr13 27121469 27121637 -93162675 + RLTR25B LTR ERVK 869 1026 -2 1 791 219 69 0 0 chr13 27121874 27121903 -93162409 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1 791 261 83 0 0 chr13 27122642 27122678 -93161634 + (A)n Simple_repeat Simple_repeat 1 36 0 1 791 22 0 0 0 chr13 27124150 27124172 -93160140 + AT_rich Low_complexity Low_complexity 1 22 0 1 791 21 0 0 0 chr13 27125788 27125809 -93158503 + AT_rich Low_complexity Low_complexity 1 21 0 1 791 26 0 0 0 chr13 27125895 27125921 -93158391 + AT_rich Low_complexity Low_complexity 1 26 0 1 791 1027 96 7 0 chr13 27126029 27126175 -93158137 + B1_Mm SINE Alu 1 147 0 1 791 180 0 0 0 chr13 27126194 27126214 -93158098 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 791 216 143 0 0 chr13 27126221 27126263 -93158049 + (A)n Simple_repeat Simple_repeat 1 42 0 1 791 485 316 75 40 chr13 27126478 27126821 -93157491 + Lx8 LINE L1 6246 6616 -857 1 791 355 143 35 23 chr13 27126912 27126998 -93157314 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 1 791 396 0 0 0 chr13 27127000 27127044 -93157268 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 791 260 277 27 0 chr13 27127047 27127159 -93157153 + (CAGAGA)n Simple_repeat Simple_repeat 2 116 0 1 791 296 222 0 31 chr13 27127166 27127231 -93157081 + Lx8 LINE L1 6960 7022 -451 1 791 459 380 27 36 chr13 27127251 27127472 -93156840 + B4A SINE B4 74 292 0 1 791 183 235 0 0 chr13 27127852 27127903 -93156409 + (TATATG)n Simple_repeat Simple_repeat 5 55 0 1 791 630 182 16 4 chr13 27129152 27129286 -93155026 - L1_Mur2 LINE L1 -852 5288 5123 1 791 8583 143 48 5 chr13 27129291 27130913 -93153399 + Lx4A LINE L1 5363 7057 -1 1 791 38 22 0 0 chr13 27131634 27131679 -93152633 + AT_rich Low_complexity Low_complexity 1 45 0 1 792 359 170 30 10 chr13 27132169 27132270 -93152042 + GA-rich Low_complexity Low_complexity 3 105 0 1 792 234 271 0 28 chr13 27132302 27132374 -93151938 + GA-rich Low_complexity Low_complexity 1 70 0 1 792 183 80 0 0 chr13 27133082 27133107 -93151205 + (A)n Simple_repeat Simple_repeat 1 25 0 1 792 218 193 0 17 chr13 27133647 27133705 -93150607 + GA-rich Low_complexity Low_complexity 3 59 0 1 792 258 243 164 68 chr13 27133812 27133958 -93150354 + L1MEf LINE L1 1583 1742 -4458 1 792 272 158 18 0 chr13 27134787 27134844 -93149468 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 1 792 419 52 0 94 chr13 27135714 27135841 -93148471 + (TTTG)n Simple_repeat Simple_repeat 2 116 0 1 792 27 62 0 0 chr13 27136058 27136106 -93148206 + AT_rich Low_complexity Low_complexity 1 48 0 1 792 275 202 18 18 chr13 27136144 27136255 -93148057 + (TA)n Simple_repeat Simple_repeat 1 111 0 1 792 495 186 0 0 chr13 27138560 27138657 -93145655 + (TA)n Simple_repeat Simple_repeat 1 97 0 1 792 618 51 0 0 chr13 27138826 27138904 -93145408 + (TCCC)n Simple_repeat Simple_repeat 2 79 0 2 792 432 0 0 0 chr13 27138904 27138952 -93145360 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 792 447 336 16 0 chr13 27138958 27139080 -93145232 - RSINE1 SINE B4 -13 152 29 2 792 2788 111 7 7 chr13 27139494 27139901 -93144411 + MTB_Mm LTR MaLR 1 407 0 2 792 220 214 10 82 chr13 27140027 27140124 -93144188 + A-rich Low_complexity Low_complexity 2 91 0 2 792 1331 263 22 27 chr13 27140150 27140517 -93143795 - Lx7 LINE L1 -587 7109 6745 2 792 342 250 10 68 chr13 27141940 27142043 -93142269 + Lx9 LINE L1 6859 6955 -689 2 792 1665 77 0 0 chr13 27142060 27142281 -93142031 + RLTR13B2 LTR ERVK 1 221 -708 2 792 8010 46 4 0 chr13 27142281 27143539 -93140773 + L1Md_F2 LINE L1 5323 6582 0 2 792 4568 73 10 16 chr13 27143542 27144179 -93140133 + RLTR13B2 LTR ERVK 202 822 0 2 792 784 323 26 40 chr13 27144183 27144560 -93139752 + Lx9 LINE L1 6963 7334 -310 2 792 405 0 0 0 chr13 27144561 27144606 -93139706 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 792 2843 70 5 3 chr13 27144905 27145293 -93139019 - MTA_Mm LTR MaLR -7 389 1 2 792 25 51 0 0 chr13 27145795 27145834 -93138478 + AT_rich Low_complexity Low_complexity 1 39 0 2 792 35 71 0 0 chr13 27146743 27146813 -93137499 + AT_rich Low_complexity Low_complexity 1 70 0 2 792 455 330 17 11 chr13 27148061 27148239 -93136073 + B3A SINE B2 4 182 -16 2 792 520 26 0 60 chr13 27151893 27151976 -93132336 + RMER17A2 LTR ERVK 437 514 -392 2 792 973 329 34 31 chr13 27152329 27152683 -93131629 + Lx5 LINE L1 6693 7047 -3 2 792 222 261 11 21 chr13 27152688 27152782 -93131530 + A-rich Low_complexity Low_complexity 4 96 0 2 792 381 129 34 17 chr13 27154243 27154361 -93129951 + (TA)n Simple_repeat Simple_repeat 2 121 0 2 792 351 257 11 41 chr13 27155508 27155615 -93128697 + PB1D9 SINE Alu 1 99 -50 2 792 564 276 0 7 chr13 27155725 27155860 -93128452 + B4 SINE B4 159 292 0 2 792 21 0 0 0 chr13 27156698 27156719 -93127593 + AT_rich Low_complexity Low_complexity 1 21 0 2 792 6926 58 1 18 chr13 27157475 27158367 -93125945 - L1Md_F2 LINE L1 -12 6570 5694 2 792 29 0 0 0 chr13 27158699 27158728 -93125584 + AT_rich Low_complexity Low_complexity 1 29 0 2 792 198 0 0 0 chr13 27159219 27159241 -93125071 + (CAA)n Simple_repeat Simple_repeat 1 22 0 2 792 201 74 0 0 chr13 27159243 27159270 -93125042 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 2 792 280 270 0 74 chr13 27159272 27159380 -93124932 + RMER15-int LTR ERVL 4641 4740 -259 2 792 286 273 2 0 chr13 27160715 27160782 -93123530 - RLTR20B1 LTR ERVK -38 525 454 2 792 1078 112 11 0 chr13 27160830 27161008 -93123304 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 792 1778 205 73 41 chr13 27161022 27161156 -93123156 - RLTR20B1 LTR ERVK -111 452 300 2 792 419 48 16 0 chr13 27161156 27161218 -93123094 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 792 1778 205 73 41 chr13 27161218 27161521 -93122791 - RLTR20B1 LTR ERVK -264 299 2 2 792 5119 166 39 15 chr13 27161521 27162581 -93121731 - MYSERV16_I-int LTR ERVK 0 2326 1242 2 792 240 35 0 0 chr13 27163704 27163733 -93120579 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 792 5113 131 20 20 chr13 27163791 27164626 -93119686 + Lx LINE L1 5817 6651 -3 2 792 504 0 0 0 chr13 27164675 27164731 -93119581 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 792 410 0 20 0 chr13 27165014 27165064 -93119248 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 2 792 645 161 76 0 chr13 27165736 27165854 -93118458 + Lx7 LINE L1 6831 6957 -739 2 792 357 319 43 29 chr13 27165926 27166136 -93118176 - B3 SINE B2 -2 214 2 2 792 281 125 18 0 chr13 27166159 27166215 -93118097 + (TCCC)n Simple_repeat Simple_repeat 2 58 0 2 792 664 221 14 14 chr13 27166546 27166684 -93117628 + B1_Mus1 SINE Alu 9 146 -2 2 792 781 301 61 33 chr13 27166744 27167352 -93116960 - L1_Mur3 LINE L1 -825 5055 4431 2 792 88 73 0 0 chr13 27167355 27167534 -93116778 + AT_rich Low_complexity Low_complexity 1 179 0 2 792 295 283 6 70 chr13 27167537 27167708 -93116604 - L1_Mur3 LINE L1 -1466 4414 4255 2 792 333 0 0 0 chr13 27167956 27167993 -93116319 + (T)n Simple_repeat Simple_repeat 1 37 0 2 792 3094 45 0 0 chr13 27168055 27168430 -93115882 - L1Md_F2 LINE L1 -14 6568 6194 2 792 330 45 0 0 chr13 27168804 27168848 -93115464 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 792 949 375 52 25 chr13 27168849 27169904 -93114408 + Lx7 LINE L1 6190 7273 -423 2 792 213 39 0 0 chr13 27169943 27169969 -93114343 + (ATTG)n Simple_repeat Simple_repeat 1 26 0 2 792 450 0 0 0 chr13 27169970 27170020 -93114292 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 2 792 432 0 0 0 chr13 27170631 27170679 -93113633 + (T)n Simple_repeat Simple_repeat 1 48 0 2 792 743 163 8 0 chr13 27170820 27170949 -93113363 + L1_Mur1 LINE L1 5570 5699 -187 2 792 4467 86 11 67 chr13 27170951 27171658 -93112654 + L1_Mus2 LINE L1 5896 6563 -3 2 792 21 0 0 0 chr13 27171766 27171787 -93112525 + AT_rich Low_complexity Low_complexity 1 21 0 2 792 308 355 8 0 chr13 27172267 27172391 -93111921 - Lx8 LINE L1 -302 7171 7047 2 792 2702 159 2 34 chr13 27173380 27173854 -93110458 - Lx2 LINE L1 -364 6633 6175 2 792 1426 168 73 40 chr13 27173852 27174061 -93110251 + Lx2 LINE L1 6658 6884 -113 2 792 186 43 0 0 chr13 27174061 27174084 -93110228 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 2 792 1426 168 73 40 chr13 27174084 27174203 -93110109 + Lx2 LINE L1 6885 6997 0 2 792 327 255 55 7 chr13 27174205 27174354 -93109958 - L1M2 LINE L1 -1529 4614 4453 2 792 366 335 49 4 chr13 27174344 27174587 -93109725 - L1M2 LINE L1 -2453 3690 3437 2 792 251 267 77 56 chr13 27174819 27174962 -93109350 + L1M2 LINE L1 5527 5672 -628 2 792 24 0 0 0 chr13 27175587 27175611 -93108701 + AT_rich Low_complexity Low_complexity 1 24 0 2 792 32131 41 1 1 chr13 27176214 27180188 -93104124 + L1Md_A LINE L1 1614 5586 -297 2 792 8263 42 1 0 chr13 27180188 27181183 -93103129 + L1Md_A LINE L1 5587 6582 0 2 792 192 77 0 0 chr13 27181209 27181235 -93103077 + (A)n Simple_repeat Simple_repeat 1 26 0 2 792 2126 36 0 0 chr13 27181329 27181581 -93102731 + L1Md_T LINE L1 6329 6580 -2 2 792 17839 140 9 17 chr13 27181629 27185568 -93098744 - L1_Mus3 LINE L1 -20 6618 2713 2 792 275 309 0 40 chr13 27186094 27186195 -93098117 + RMER15 LTR ERVL 355 451 -124 2 792 191 103 0 25 chr13 27186253 27186293 -93098019 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 792 266 282 11 23 chr13 27186293 27186380 -93097932 + RMER15-int LTR ERVL 4712 4797 -202 2 792 23 54 0 0 chr13 27187638 27187675 -93096637 + AT_rich Low_complexity Low_complexity 1 37 0 2 792 1516 43 0 0 chr13 27189390 27189575 -93094737 - B2_Mm1t SINE B2 -3 190 6 2 792 273 29 0 0 chr13 27191000 27191034 -93093278 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 792 261 0 0 0 chr13 27191052 27191081 -93093231 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 792 249 57 0 0 chr13 27191137 27191172 -93093140 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 2 792 23 0 0 0 chr13 27191355 27191378 -93092934 + AT_rich Low_complexity Low_complexity 1 23 0 2 792 225 108 0 0 chr13 27191654 27191691 -93092621 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 792 519 31 0 0 chr13 27191691 27191756 -93092556 + (GA)n Simple_repeat Simple_repeat 1 65 0 2 792 23 0 0 0 chr13 27192090 27192113 -93092199 + AT_rich Low_complexity Low_complexity 1 23 0 2 792 3449 63 0 5 chr13 27192785 27193229 -93091083 - L1Md_F3 LINE L1 -14 6570 6129 2 792 21 0 0 0 chr13 27193931 27193952 -93090360 + AT_rich Low_complexity Low_complexity 1 21 0 2 792 2911 63 0 3 chr13 27193985 27194366 -93089946 - L1Md_F2 LINE L1 -2 6580 6201 2 792 477 0 0 0 chr13 27194421 27194474 -93089838 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 792 279 0 0 0 chr13 27194474 27194504 -93089808 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 792 1141 56 12 6 chr13 27195188 27195349 -93088963 + L1Md_F3 LINE L1 6422 6583 -1 2 792 239 33 0 0 chr13 27195895 27195925 -93088387 + L1_Mus2 LINE L1 6295 6324 -242 2 792 983 229 21 52 chr13 27195933 27196223 -93088089 + Lx2B LINE L1 6203 6483 -517 2 792 396 123 0 0 chr13 27196240 27196305 -93088007 + Lx2B LINE L1 6608 6672 -328 2 792 636 333 77 33 chr13 27196317 27196349 -93087963 - RLTR20A2 LTR ERVK -12 539 507 2 792 378 0 0 0 chr13 27196349 27196391 -93087921 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 792 640 305 78 18 chr13 27196391 27196786 -93087526 - RLTR20A2 LTR ERVK -45 506 93 2 792 27 29 0 0 chr13 27196790 27196824 -93087488 + AT_rich Low_complexity Low_complexity 1 34 0 2 792 337 300 93 58 chr13 27196907 27197250 -93087062 + L1M4 LINE L1 4909 5263 -883 2 792 26 0 0 0 chr13 27197295 27197321 -93086991 + AT_rich Low_complexity Low_complexity 1 26 0 2 792 259 311 53 0 chr13 27197505 27197637 -93086675 + L1M4 LINE L1 5531 5669 -510 2 792 3274 104 96 2 chr13 27197828 27198319 -93085993 - L1_Mus3 LINE L1 -3 6635 6099 2 792 1251 171 0 24 chr13 27198313 27198564 -93085748 - Lx LINE L1 -13 6641 6397 2 792 1833 145 3 3 chr13 27198564 27198854 -93085458 + Lx LINE L1 6100 6389 -265 2 792 341 147 0 221 chr13 27198854 27198985 -93085327 - RLTR20D LTR ERVK -466 102 1 2 792 237 200 40 0 chr13 27199001 27199025 -93085287 + A-rich Low_complexity Low_complexity 5 28 0 2 792 516 45 0 0 chr13 27199025 27199092 -93085220 + (CCA)n Simple_repeat Simple_repeat 1 67 0 2 792 237 200 40 0 chr13 27199092 27199142 -93085170 + A-rich Low_complexity Low_complexity 29 81 0 2 792 2389 178 80 10 chr13 27199142 27199727 -93084585 - MYSERV16_I-int LTR ERVK -21 2305 1680 2 792 87 60 0 0 chr13 27199774 27199924 -93084388 + AT_rich Low_complexity Low_complexity 1 150 0 2 792 355 235 47 110 chr13 27199943 27200134 -93084178 - L1_Mur3 LINE L1 -1457 4423 4245 2 792 314 328 40 44 chr13 27200299 27200573 -93083739 - L1_Mur3 LINE L1 -1714 4166 3894 2 792 1121 377 45 23 chr13 27200706 27201800 -93082512 + Lx7 LINE L1 6156 7273 -423 2 792 186 43 0 0 chr13 27201839 27201862 -93082450 + (ATTG)n Simple_repeat Simple_repeat 4 26 0 2 792 270 0 0 0 chr13 27201866 27201896 -93082416 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2 792 286 396 13 25 chr13 27202423 27202581 -93081731 + RSINE1 SINE B4 4 159 -6 2 792 819 171 7 7 chr13 27202650 27202797 -93081515 + L1_Mur1 LINE L1 5570 5716 -170 2 792 4248 98 11 91 chr13 27202781 27203466 -93080846 + L1_Mus2 LINE L1 5896 6533 -33 2 792 8222 21 1 0 chr13 27203466 27204419 -93079893 + L1Md_A LINE L1 5629 6582 0 2 792 4248 98 11 91 chr13 27204419 27204459 -93079853 + L1_Mus2 LINE L1 6534 6563 -3 2 792 290 355 8 0 chr13 27205065 27205189 -93079123 - Lx8 LINE L1 -302 7171 7047 3 792 2773 159 2 2 chr13 27206179 27206638 -93077674 - Lx2 LINE L1 -364 6633 6175 3 792 1419 175 71 83 chr13 27206636 27206972 -93077340 + Lx2 LINE L1 6658 6989 -8 3 792 261 294 39 16 chr13 27207007 27207135 -93077177 - L1M2 LINE L1 -1557 4583 4453 3 792 393 305 62 13 chr13 27207143 27207369 -93076943 - L1M2 LINE L1 -2470 3673 3437 3 792 324 275 59 38 chr13 27207585 27207750 -93076562 + L1M3 LINE L1 5518 5684 -607 3 792 269 159 0 0 chr13 27209043 27209087 -93075225 + RMER15-int LTR ERVL 4697 4740 -259 3 792 17677 128 10 9 chr13 27209128 27211005 -93073307 - L1_Mus3 LINE L1 -45 6593 4732 3 792 201 39 0 0 chr13 27211005 27211031 -93073281 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 3 792 17677 154 6 17 chr13 27211031 27213057 -93071255 - L1_Mus3 LINE L1 -1152 4731 2713 3 792 259 320 0 40 chr13 27213583 27213684 -93070628 + RMER15 LTR ERVL 355 451 -124 3 792 206 125 21 0 chr13 27213738 27213786 -93070526 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 3 792 21 57 0 0 chr13 27215187 27215222 -93069090 + AT_rich Low_complexity Low_complexity 1 35 0 3 792 357 93 0 0 chr13 27218271 27218325 -93065987 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 792 495 48 0 0 chr13 27218327 27218389 -93065923 + (TA)n Simple_repeat Simple_repeat 1 62 0 3 792 333 123 0 0 chr13 27218428 27218493 -93065819 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 792 23 0 0 0 chr13 27218684 27218707 -93065605 + AT_rich Low_complexity Low_complexity 1 23 0 3 792 246 62 0 0 chr13 27218983 27219015 -93065297 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 792 291 54 0 0 chr13 27219016 27219053 -93065259 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 792 23 0 0 0 chr13 27219387 27219410 -93064902 + AT_rich Low_complexity Low_complexity 1 23 0 3 792 30615 47 0 20 chr13 27219695 27225918 -93058394 - L1Md_T LINE L1 0 6585 490 3 792 7407 52 3 0 chr13 27226037 27226956 -93057356 + L1Md_F2 LINE L1 5661 6582 0 3 792 3512 15 2 0 chr13 27227426 27227821 -93056491 + MTA_Mm LTR MaLR 1 396 0 3 792 24 0 0 0 chr13 27228560 27228584 -93055728 + AT_rich Low_complexity Low_complexity 1 24 0 3 792 351 0 0 0 chr13 27228661 27228700 -93055612 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 792 261 0 0 0 chr13 27228700 27228728 -93055584 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 792 1014 201 127 46 chr13 27229542 27229849 -93054463 + IAPEY3_LTR LTR ERVK 1 332 0 3 792 2098 215 11 15 chr13 27230310 27230783 -93053529 + Lx2B LINE L1 6202 6672 -328 3 792 572 322 69 80 chr13 27230795 27230826 -93053486 - RLTR20A2 LTR ERVK -12 539 507 3 792 770 0 11 0 chr13 27230826 27230916 -93053396 + (CA)n Simple_repeat Simple_repeat 2 92 0 3 792 782 300 124 25 chr13 27230916 27231391 -93052921 - RLTR20A2 LTR ERVK -64 514 6 3 792 22 0 0 0 chr13 27231844 27231866 -93052446 + AT_rich Low_complexity Low_complexity 1 22 0 3 792 232 253 69 0 chr13 27232095 27232182 -93052130 + L1M5 LINE L1 5577 5669 -510 3 792 3207 106 96 2 chr13 27232375 27232865 -93051447 - L1_Mus3 LINE L1 -4 6634 6099 3 792 1241 168 8 29 chr13 27232859 27233104 -93051208 - Lx LINE L1 -13 6641 6402 3 792 1816 148 3 10 chr13 27233107 27233401 -93050911 + Lx LINE L1 6098 6389 -265 3 792 330 188 108 36 chr13 27233401 27233484 -93050828 - RLTR20D LTR ERVK -466 102 14 3 792 230 56 0 27 chr13 27233495 27233532 -93050780 - RLTR20D LTR ERVK -532 36 1 3 792 213 191 29 14 chr13 27233550 27233571 -93050741 + A-rich Low_complexity Low_complexity 2 22 0 3 792 204 40 0 0 chr13 27233571 27233596 -93050716 + (CCA)n Simple_repeat Simple_repeat 1 25 0 3 792 222 111 0 62 chr13 27233596 27233644 -93050668 + A-rich Low_complexity Low_complexity 2 46 0 3 792 2475 185 66 5 chr13 27233644 27234232 -93050080 - MYSERV16_I-int LTR ERVK -23 2303 1680 3 792 8231 46 1 2 chr13 27234233 27235229 -93049083 - L1Md_F2 LINE L1 0 6582 5588 3 792 4421 43 0 0 chr13 27235243 27235774 -93048538 + L1_Mm LINE L1 5177 5707 -176 3 792 87 64 0 0 chr13 27235820 27235977 -93048335 + AT_rich Low_complexity Low_complexity 1 157 0 3 792 269 244 37 99 chr13 27235996 27236187 -93048125 - L1_Mur3 LINE L1 -1457 4423 4245 3 792 254 311 64 53 chr13 27236360 27236625 -93047687 - L1_Mur3 LINE L1 -1719 4161 3894 3 792 1081 372 51 25 chr13 27236703 27237850 -93046462 + Lx7 LINE L1 6097 7273 -423 3 792 21 0 0 0 chr13 27237907 27237928 -93046384 + AT_rich Low_complexity Low_complexity 1 21 0 3 792 750 121 12 0 chr13 27238689 27238815 -93045497 + Lx3B LINE L1 5570 5699 -187 3 792 3924 118 12 91 chr13 27238817 27239542 -93044770 + L1_Mus2 LINE L1 5896 6563 -3 3 792 22 35 0 0 chr13 27239646 27239675 -93044637 + AT_rich Low_complexity Low_complexity 1 29 0 3 792 360 317 16 0 chr13 27240157 27240280 -93044032 - Lx8 LINE L1 -302 7171 7047 3 792 2678 179 2 2 chr13 27241287 27241746 -93042566 - Lx2 LINE L1 -364 6633 6175 3 792 1463 143 71 91 chr13 27241744 27242083 -93042229 + Lx2 LINE L1 6658 6989 -8 3 792 252 311 41 0 chr13 27242118 27242240 -93042072 - L1M2 LINE L1 -1557 4583 4457 3 792 363 345 47 8 chr13 27242220 27242477 -93041835 - L1M2 LINE L1 -2440 3703 3437 3 792 283 298 70 1 chr13 27242698 27242832 -93041480 + L1M2 LINE L1 5511 5655 -645 3 792 25 31 0 0 chr13 27243476 27243508 -93040804 + AT_rich Low_complexity Low_complexity 1 32 0 3 792 17433 147 10 12 chr13 27244249 27248141 -93036171 - L1_Mus3 LINE L1 -44 6594 2713 3 792 25 0 0 0 chr13 27248253 27248278 -93036034 + AT_rich Low_complexity Low_complexity 1 25 0 3 792 259 320 0 40 chr13 27248678 27248779 -93035533 + RMER15 LTR ERVL 355 451 -124 3 792 289 0 49 0 chr13 27248837 27248878 -93035434 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 792 22 56 0 0 chr13 27250207 27250243 -93034069 + AT_rich Low_complexity Low_complexity 1 36 0 3 792 375 60 0 0 chr13 27253365 27253415 -93030897 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 792 29 0 0 0 chr13 27253415 27253444 -93030868 + AT_rich Low_complexity Low_complexity 1 29 0 3 792 202 196 17 35 chr13 27253463 27253521 -93030791 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 3 792 221 154 0 0 chr13 27253480 27253519 -93030793 + GA-rich Low_complexity Low_complexity 2 40 0 3 792 23 0 0 0 chr13 27253703 27253726 -93030586 + AT_rich Low_complexity Low_complexity 1 23 0 3 792 279 79 0 0 chr13 27253995 27254033 -93030279 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 792 468 51 0 0 chr13 27254034 27254093 -93030219 + (GA)n Simple_repeat Simple_repeat 1 59 0 3 792 26 30 0 0 chr13 27254415 27254448 -93029864 + AT_rich Low_complexity Low_complexity 1 33 0 3 792 25702 6 206 0 chr13 27255613 27259894 -93024418 + L1Md_A LINE L1 387 5586 -297 3 792 8987 4 0 0 chr13 27259894 27260890 -93023422 + L1Md_A LINE L1 5587 6582 0 3 792 303 28 0 0 chr13 27260907 27260943 -93023369 + (A)n Simple_repeat Simple_repeat 1 36 0 3 792 23 0 0 0 chr13 27261148 27261171 -93023141 + AT_rich Low_complexity Low_complexity 1 23 0 3 792 240 35 0 0 chr13 27261248 27261277 -93023035 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 792 228 91 0 0 chr13 27262530 27262563 -93021749 + L1_Mus2 LINE L1 6292 6324 -242 3 12 2087 219 8 27 chr13 27262571 27263050 -93021262 + Lx2B LINE L1 6203 6672 -328 3 793 664 303 89 46 chr13 27263062 27263094 -93021218 - RLTR20A2 LTR ERVK -12 539 505 3 793 677 61 10 0 chr13 27263094 27263193 -93021119 + (CA)n Simple_repeat Simple_repeat 1 100 0 3 793 816 273 166 24 chr13 27263193 27263575 -93020737 - RLTR20A2 LTR ERVK -64 514 107 3 793 30 45 0 0 chr13 27263596 27263640 -93020672 + AT_rich Low_complexity Low_complexity 1 44 0 3 793 2979 129 100 2 chr13 27264629 27265118 -93019194 - L1_Mus3 LINE L1 -3 6635 6099 3 793 1341 149 0 25 chr13 27265112 27265353 -93018959 - Lx LINE L1 -13 6641 6407 3 793 1818 154 7 3 chr13 27265353 27265652 -93018660 + Lx LINE L1 6090 6389 -265 3 793 356 167 0 221 chr13 27265652 27265783 -93018529 - RLTR20A2 LTR ERVK -466 102 1 3 793 210 80 0 57 chr13 27265849 27265902 -93018410 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 3 793 4206 179 68 1 chr13 27265936 27266885 -93017427 - MYSERV16_I-int LTR ERVK -75 2251 1239 3 793 1771 58 13 0 chr13 27266885 27267109 -93017203 + L1Md_F2 LINE L1 5360 5586 -297 3 793 7515 66 9 12 chr13 27267109 27268107 -93016205 + L1Md_F2 LINE L1 5587 6581 -1 3 793 3613 209 64 37 chr13 27268133 27269159 -93015153 - MYSERV16_I-int LTR ERVK -1463 1379 1 3 793 366 23 0 0 chr13 27269510 27269553 -93014759 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 793 9136 129 27 16 chr13 27269553 27271259 -93013053 - Lx3A LINE L1 0 6981 5282 3 793 528 56 0 0 chr13 27271259 27271331 -93012981 + (GTTTG)n Simple_repeat Simple_repeat 4 75 0 3 793 9136 107 43 5 chr13 27271331 27271832 -93012480 - Lx3A LINE L1 -605 5281 4741 3 793 481 30 30 0 chr13 27271832 27271899 -93012413 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 3 793 9136 107 43 5 chr13 27271899 27272235 -93012077 - Lx3A LINE L1 -1146 4740 4399 3 793 12007 110 13 11 chr13 27272230 27274233 -93010079 - Lx3A LINE L1 -2774 3112 1108 3 793 4367 73 16 0 chr13 27274233 27274809 -93009503 - L1_Mus1 LINE L1 0 6567 5983 3 793 6981 159 42 11 chr13 27274809 27275871 -93008441 - Lx3A LINE L1 -5877 1107 6 3 793 1411 283 50 48 chr13 27276452 27276969 -93007343 - RLTR20A2 LTR ERVK -16 562 45 3 793 812 291 57 14 chr13 27276993 27277275 -93007037 + Lx2B LINE L1 6665 6958 -42 3 793 666 276 59 34 chr13 27277358 27277594 -93006718 + RMER15 LTR ERVL 34 275 -300 3 793 438 222 10 0 chr13 27277613 27277712 -93006600 + RMER15 LTR ERVL 406 505 -70 3 793 404 222 101 9 chr13 27277785 27277894 -93006418 - Lx8 LINE L1 -1560 5913 5795 3 793 229 241 0 17 chr13 27277922 27277981 -93006331 - Lx6 LINE L1 -1339 6121 6064 3 793 1485 297 121 9 chr13 27278000 27278943 -93005369 + Lx6 LINE L1 6169 7433 -27 3 793 304 310 62 11 chr13 27278966 27279227 -93005085 - Lx8 LINE L1 -1941 5755 5474 3 793 186 118 0 0 chr13 27279256 27279290 -93005022 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 3 793 549 30 0 0 chr13 27279313 27279380 -93004932 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 793 631 279 50 0 chr13 27279393 27279554 -93004758 - B3 SINE B2 -13 203 35 3 793 966 298 64 103 chr13 27279581 27279974 -93004338 - Lx8 LINE L1 -447 5433 5027 3 793 1451 28 0 11 chr13 27279974 27280155 -93004157 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 3 793 966 298 64 103 chr13 27280155 27280230 -93004082 - Lx8 LINE L1 -854 5026 4990 3 793 926 96 6 70 chr13 27280230 27280387 -93003925 - B1_Mus1 SINE Alu -1 147 1 3 793 966 298 64 103 chr13 27280387 27280901 -93003411 - Lx8 LINE L1 -891 4989 4488 3 793 953 361 82 37 chr13 27280939 27281749 -93002563 + Lx8 LINE L1 6447 7292 -181 3 793 734 284 92 22 chr13 27281865 27282092 -93002220 - Lx5 LINE L1 -125 6925 6683 3 793 585 76 0 0 chr13 27282093 27282172 -93002140 + (TATG)n Simple_repeat Simple_repeat 2 80 0 3 793 6460 143 27 6 chr13 27282176 27283766 -93000546 + Lx LINE L1 5033 6648 -6 3 793 743 215 123 5 chr13 27283897 27284084 -93000228 + ORR1B2 LTR MaLR 159 367 0 3 793 767 202 35 18 chr13 27284084 27284252 -93000060 + RLTR28B LTR ERVL 256 426 -55 3 793 687 348 55 23 chr13 27284324 27284671 -92999641 - RMER15 LTR ERVL -55 520 163 3 793 228 273 0 0 chr13 27284723 27284778 -92999534 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 793 545 184 9 0 chr13 27284832 27284946 -92999366 + (TA)n Simple_repeat Simple_repeat 1 115 0 3 793 286 326 44 11 chr13 27285509 27285599 -92998713 + B4A SINE B4 103 195 -97 4 793 261 0 0 0 chr13 27285674 27285703 -92998609 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 793 729 122 0 0 chr13 27285703 27285850 -92998462 + (GA)n Simple_repeat Simple_repeat 1 147 0 4 793 297 0 0 0 chr13 27285850 27285883 -92998429 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 793 405 0 0 0 chr13 27285883 27285927 -92998385 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 793 312 364 11 23 chr13 27288519 27288696 -92995616 + RMER15 LTR ERVL 328 502 -73 4 793 882 156 0 0 chr13 27289404 27289558 -92994754 + GA-rich Low_complexity Low_complexity 3 156 0 4 793 411 78 0 0 chr13 27289556 27289620 -92994692 + (CAA)n Simple_repeat Simple_repeat 2 65 0 4 793 4444 134 32 109 chr13 27289799 27290157 -92994155 - RMER17A2 LTR ERVK 0 906 583 4 793 1397 78 0 10 chr13 27290157 27290350 -92993962 + L1Md_F2 LINE L1 6380 6570 -12 4 793 4444 134 32 109 chr13 27290350 27290973 -92993339 - RMER17A2 LTR ERVK -324 582 1 4 793 1712 126 118 7 chr13 27292036 27292324 -92991988 - Lx3A LINE L1 -2 6979 6660 4 793 223 174 0 0 chr13 27292328 27292374 -92991938 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 4 793 286 276 0 65 chr13 27293929 27294022 -92990290 + RLTR25B LTR ERVK 435 521 -507 4 793 728 72 0 0 chr13 27293947 27294044 -92990268 + B1_Mm SINE Alu 51 147 0 4 793 211 28 0 53 chr13 27294044 27294082 -92990230 + (CAAAA)n Simple_repeat Simple_repeat 4 39 0 4 793 247 348 76 42 chr13 27294881 27295025 -92989287 + B4 SINE B4 2 150 -142 4 793 271 290 0 0 chr13 27295164 27295226 -92989086 + G-rich Low_complexity Low_complexity 6 67 0 4 793 24 53 0 0 chr13 27295559 27295597 -92988715 + AT_rich Low_complexity Low_complexity 1 38 0 4 793 266 0 0 29 chr13 27295810 27295845 -92988467 + (CAA)n Simple_repeat Simple_repeat 2 35 0 4 793 1644 195 58 9 chr13 27296072 27296414 -92987898 + RLTR15 LTR ERVK 1 359 0 4 793 1137 82 0 0 chr13 27296945 27297092 -92987220 - B1_Mus1 SINE Alu -1 147 1 4 793 596 106 0 11 chr13 27297891 27297986 -92986326 + (AATAG)n Simple_repeat Simple_repeat 3 96 0 4 793 972 124 0 0 chr13 27297987 27298165 -92986147 + (GAGAA)n Simple_repeat Simple_repeat 3 180 0 4 793 246 320 20 0 chr13 27298624 27298724 -92985588 + (TA)n Simple_repeat Simple_repeat 1 102 0 4 793 615 347 25 21 chr13 27298775 27299102 -92985210 - Lx9 LINE L1 -215 7429 7102 4 793 30 27 0 0 chr13 27299282 27299319 -92984993 + AT_rich Low_complexity Low_complexity 1 37 0 4 793 5248 3 0 0 chr13 27299374 27299956 -92984356 + L1Md_A LINE L1 6001 6582 0 4 793 1057 299 55 55 chr13 27300600 27301288 -92983024 - Lx9 LINE L1 -26 7618 6931 4 793 1185 8 0 0 chr13 27301291 27301425 -92982887 + (GA)n Simple_repeat Simple_repeat 1 134 0 4 793 243 259 0 0 chr13 27301428 27301486 -92982826 - L1_Rod LINE L1 -7 5840 5783 4 793 695 72 5 12 chr13 27301513 27301619 -92982693 + L1Md_T LINE L1 5479 5586 -297 4 793 8413 33 0 0 chr13 27301619 27302615 -92981697 + L1Md_T LINE L1 5587 6582 0 4 793 27 62 0 0 chr13 27303482 27303530 -92980782 + AT_rich Low_complexity Low_complexity 1 48 0 4 793 357 326 58 58 chr13 27303679 27303779 -92980533 + B4 SINE B4 137 240 -52 4 793 1051 103 0 0 chr13 27303779 27303925 -92980387 + B1_Mus1 SINE Alu 1 146 -2 4 793 357 326 58 58 chr13 27303925 27303980 -92980332 + B4 SINE B4 241 292 0 4 793 207 277 0 0 chr13 27303980 27304045 -92980267 + (CACG)n Simple_repeat Simple_repeat 3 67 0 4 793 371 343 64 82 chr13 27305718 27306436 -92977876 + Lx8 LINE L1 6359 7063 -410 4 793 4748 74 9 2 chr13 27306601 27307238 -92977074 + L1_Mus2 LINE L1 5925 6566 0 4 793 960 87 0 0 chr13 27307306 27307455 -92976857 + (TC)n Simple_repeat Simple_repeat 2 150 0 4 793 435 113 0 0 chr13 27307455 27307525 -92976787 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 793 1088 96 6 0 chr13 27307671 27307848 -92976464 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 4 793 8496 129 20 7 chr13 27307849 27309933 -92974379 - Lx3A LINE L1 -6 6975 4861 4 793 6103 104 44 16 chr13 27309932 27310952 -92973360 + L1_Mur1 LINE L1 3079 4127 -1759 4 793 279 0 0 0 chr13 27312126 27312157 -92972155 + (CAA)n Simple_repeat Simple_repeat 2 32 0 4 793 29 28 0 0 chr13 27312337 27312373 -92971939 + AT_rich Low_complexity Low_complexity 1 36 0 4 793 317 361 72 0 chr13 27313059 27313253 -92971059 + B3 SINE B2 1 208 -8 4 793 2065 112 0 16 chr13 27313375 27313693 -92970619 - L1Md_F2 LINE L1 0 6582 6270 4 793 300 238 0 0 chr13 27314065 27314149 -92970163 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 793 1121 75 0 0 chr13 27314492 27314639 -92969673 - B1_Mm SINE Alu 0 147 1 4 793 181 333 103 10 chr13 27315585 27315682 -92968630 - MIRb SINE MIR -52 216 111 4 793 2046 110 7 7 chr13 27315727 27316037 -92968275 + L1_Mus4 LINE L1 6324 6633 -3 4 793 272 129 0 70 chr13 27317399 27317499 -92966813 + (TCTA)n Simple_repeat Simple_repeat 1 93 0 4 793 366 80 0 0 chr13 27317716 27317766 -92966546 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 793 400 313 59 7 chr13 27317881 27318016 -92966296 + B4 SINE B4 4 145 -147 4 793 207 113 37 19 chr13 27318149 27318158 -92966154 + (TG)n Simple_repeat Simple_repeat 2 10 0 4 793 998 82 7 0 chr13 27318158 27318304 -92966008 + (TC)n Simple_repeat Simple_repeat 2 148 0 4 793 207 113 37 19 chr13 27318304 27318348 -92965964 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 793 400 168 20 59 chr13 27318533 27318634 -92965678 + Lx9 LINE L1 7547 7643 -1 4 793 235 282 0 0 chr13 27318730 27318801 -92965511 + (CATA)n Simple_repeat Simple_repeat 4 74 0 4 793 21 36 0 0 chr13 27319504 27319532 -92964780 + AT_rich Low_complexity Low_complexity 1 28 0 4 793 1766 318 43 10 chr13 27319734 27320412 -92963900 - Lx7 LINE L1 -429 7267 6568 4 793 27 62 0 0 chr13 27320593 27320641 -92963671 + AT_rich Low_complexity Low_complexity 1 48 0 4 793 1436 260 86 2 chr13 27322151 27322594 -92961718 - Lx9 LINE L1 -7 7637 7158 4 793 1055 199 0 0 chr13 27322594 27322775 -92961537 + URR1A DNA MER1_type 46 226 0 4 793 514 275 70 27 chr13 27322918 27323105 -92961207 + Lx6 LINE L1 7246 7440 -20 4 793 935 75 8 0 chr13 27323203 27323336 -92960976 - L1_Mus2 LINE L1 -2 6564 6431 4 793 348 312 32 75 chr13 27323885 27324072 -92960240 - RMER15 LTR ERVL -193 382 204 4 793 257 307 178 41 chr13 27324105 27324302 -92960010 - RMER15 LTR ERVL -324 251 28 4 793 239 108 0 0 chr13 27324275 27324312 -92960000 + LTR90B LTR LTR 657 693 -103 4 793 541 378 51 11 chr13 27324746 27325019 -92959293 + B4 SINE B4 5 288 -4 4 793 1044 285 44 25 chr13 27325196 27325563 -92958749 + ORR1D1 LTR MaLR 1 374 0 4 793 489 355 91 34 chr13 27327591 27327735 -92956577 - Lx8 LINE L1 -321 7152 6998 4 793 621 27 0 0 chr13 27327735 27327810 -92956502 + (TC)n Simple_repeat Simple_repeat 1 75 0 4 793 489 355 91 34 chr13 27327810 27328195 -92956117 - Lx8 LINE L1 -476 6997 6594 4 793 685 300 152 10 chr13 27328602 27328905 -92955407 - RMER15 LTR ERVL -44 531 186 4 793 5383 195 23 10 chr13 27329236 27329247 -92955065 - Lx4B LINE L1 0 7058 7048 4 793 614 47 24 0 chr13 27329247 27329332 -92954980 + (TATG)n Simple_repeat Simple_repeat 2 88 0 4 793 5383 195 23 10 chr13 27329332 27330431 -92953881 - Lx4B LINE L1 -11 7047 5933 4 793 2278 191 10 20 chr13 27330439 27331047 -92953265 + Lx4B LINE L1 5372 5969 -1089 4 793 339 65 0 0 chr13 27331371 27331417 -92952895 + (CAA)n Simple_repeat Simple_repeat 2 47 0 4 793 279 0 0 0 chr13 27331985 27332016 -92952296 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 793 226 331 125 31 chr13 27332888 27333016 -92951296 - RLTR9E LTR ERVK -182 227 88 4 793 441 0 0 0 chr13 27333659 27333708 -92950604 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 793 1090 89 0 0 chr13 27335027 27335160 -92949152 + B1_Mm SINE Alu 2 134 -13 4 793 351 0 0 0 chr13 27335160 27335199 -92949113 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 4 793 1090 89 0 0 chr13 27335199 27335211 -92949101 + B1_Mm SINE Alu 135 146 -1 4 793 537 146 24 0 chr13 27335783 27335906 -92948406 + (TCTA)n Simple_repeat Simple_repeat 1 126 0 4 793 934 312 25 55 chr13 27335941 27336345 -92947967 - Lx6 LINE L1 -61 7399 7008 4 793 21 36 0 0 chr13 27337540 27337568 -92946744 + AT_rich Low_complexity Low_complexity 1 28 0 4 793 285 131 0 0 chr13 27337772 27337833 -92946479 + (CAAA)n Simple_repeat Simple_repeat 4 64 0 4 793 537 16 0 0 chr13 27339941 27340003 -92944309 + (TAGA)n Simple_repeat Simple_repeat 1 62 0 4 793 40 79 0 0 chr13 27340142 27340231 -92944081 + AT_rich Low_complexity Low_complexity 1 89 0 4 793 886 229 21 0 chr13 27341853 27342045 -92942267 + Lx7 LINE L1 7127 7322 -374 4 793 2849 57 0 0 chr13 27342036 27342386 -92941926 - L1Md_F2 LINE L1 -128 6454 6105 4 793 313 272 69 39 chr13 27342416 27342546 -92941766 + Lx7 LINE L1 7562 7695 -1 4 793 890 240 22 18 chr13 27342604 27342829 -92941483 + URR1A DNA MER1_type 1 226 0 4 793 283 325 72 17 chr13 27345976 27346127 -92938185 + B4 SINE B4 1 157 -135 4 793 915 10 0 0 chr13 27346436 27346540 -92937772 + (TTC)n Simple_repeat Simple_repeat 2 105 0 4 793 278 362 84 18 chr13 27347565 27347838 -92936474 + B4A SINE B4 2 292 0 4 793 218 184 13 0 chr13 27347839 27347915 -92936397 + (CA)n Simple_repeat Simple_repeat 1 77 0 4 793 536 0 16 0 chr13 27348586 27348650 -92935662 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 793 1792 134 0 4 chr13 27348943 27349212 -92935100 - Lx2 LINE L1 -224 6773 6506 4 793 964 136 49 59 chr13 27349212 27349370 -92934942 + Lx2 LINE L1 6795 6956 -41 4 793 3180 53 8 2 chr13 27349370 27349764 -92934548 - MTA_Mm LTR MaLR 0 396 1 4 793 964 136 49 59 chr13 27349764 27349808 -92934504 + Lx2 LINE L1 6957 6995 -2 4 793 496 365 56 38 chr13 27350713 27351160 -92933152 + RMER15-int LTR ERVL 4500 4954 -45 4 793 340 369 24 12 chr13 27351512 27351682 -92932630 + RMER15 LTR ERVL 378 549 -26 4 793 560 262 127 19 chr13 27352329 27352471 -92931841 - Lx9 LINE L1 -2 7642 7479 4 793 2825 87 10 5 chr13 27352471 27352865 -92931447 - MTA_Mm LTR MaLR 0 396 1 4 793 560 262 127 19 chr13 27352865 27353029 -92931283 - Lx9 LINE L1 -166 7478 7303 4 793 27 0 0 0 chr13 27353058 27353085 -92931227 + AT_rich Low_complexity Low_complexity 1 27 0 4 793 5369 96 13 3 chr13 27353275 27354051 -92930261 + L1Md_T LINE L1 422 1205 -5519 5 793 35764 34 2 0 chr13 27354028 27358464 -92925848 + L1Md_T LINE L1 1141 5586 -297 5 793 7762 48 3 44 chr13 27358464 27359525 -92924787 + L1Md_T LINE L1 5587 6582 0 5 793 405 39 0 0 chr13 27359675 27359726 -92924586 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 793 216 0 0 0 chr13 27359726 27359749 -92924563 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 793 250 240 44 44 chr13 27359754 27359889 -92924423 + Lx9 LINE L1 7509 7643 -1 5 793 3915 73 52 4 chr13 27360087 27360624 -92923688 + L1Md_F2 LINE L1 6009 6571 -11 5 793 873 104 0 16 chr13 27360819 27360832 -92923480 - B1_Mm SINE Alu 0 147 136 5 793 231 36 0 0 chr13 27360832 27360860 -92923452 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5 793 873 104 0 16 chr13 27360860 27360973 -92923339 - B1_Mm SINE Alu -12 135 23 5 793 530 277 47 136 chr13 27363185 27363783 -92920529 - Lx9 LINE L1 -1 7643 7099 5 793 22 35 0 0 chr13 27364136 27364165 -92920147 + AT_rich Low_complexity Low_complexity 1 29 0 5 793 795 112 0 0 chr13 27364551 27364676 -92919636 - L1_Mus2 LINE L1 -1 6565 6441 5 793 504 48 0 0 chr13 27364718 27364781 -92919531 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 5 793 232 106 44 56 chr13 27365598 27365688 -92918624 + T-rich Low_complexity Low_complexity 2 90 0 5 793 3614 60 19 2 chr13 27365694 27366163 -92918149 - L1_Mus1 LINE L1 -1 6566 6090 5 793 317 340 18 9 chr13 27367456 27367566 -92916746 + B4 SINE B4 1 111 -181 5 793 246 292 14 0 chr13 27367774 27367846 -92916466 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 793 782 268 55 68 chr13 27368223 27368515 -92915797 + Lx6 LINE L1 7147 7434 -26 5 793 426 312 198 10 chr13 27370347 27370648 -92913664 + MTD LTR MaLR 1 358 -61 5 793 31 58 0 0 chr13 27370981 27371033 -92913279 + AT_rich Low_complexity Low_complexity 1 52 0 5 793 279 0 0 0 chr13 27371144 27371175 -92913137 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 793 3754 203 70 73 chr13 27371314 27371817 -92912495 - L1_Mur3 LINE L1 -1865 4015 3543 5 793 1102 101 0 0 chr13 27371817 27371965 -92912347 - B1_Mus1 SINE Alu 0 148 1 5 793 3754 203 70 73 chr13 27371965 27372798 -92911514 - L1_Mur3 LINE L1 -2338 3542 2684 5 793 883 270 71 27 chr13 27372790 27373087 -92911225 + Lx6 LINE L1 5812 6121 -1339 5 793 2793 220 55 24 chr13 27373089 27373712 -92910600 + RLTR26 LTR ERVK 1 642 0 5 793 1058 285 122 50 chr13 27373730 27374427 -92909885 + Lx6 LINE L1 6168 7108 -352 5 793 413 234 168 48 chr13 27374402 27374637 -92909675 + Lx4B LINE L1 6784 7014 -36 5 793 657 0 0 0 chr13 27374637 27374710 -92909602 + (GA)n Simple_repeat Simple_repeat 2 74 0 5 793 401 245 76 158 chr13 27374710 27374769 -92909543 + Lx4B LINE L1 7015 7050 0 5 793 5771 119 61 1 chr13 27374929 27375836 -92908476 - Lx LINE L1 -1 6653 5693 5 793 299 150 0 16 chr13 27375873 27375934 -92908378 + CT-rich Low_complexity Low_complexity 2 61 0 5 793 749 309 36 40 chr13 27376620 27376896 -92907416 - B4A SINE B4 -10 282 8 5 793 7709 75 1 3 chr13 27377605 27378722 -92905590 - L1_Mus1 LINE L1 0 6567 5451 5 793 194 62 31 0 chr13 27378755 27378787 -92905525 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 793 220 68 95 14 chr13 27379048 27379122 -92905190 + (TA)n Simple_repeat Simple_repeat 2 81 0 5 793 289 314 23 0 chr13 27379794 27379880 -92904432 - B3A SINE B2 -94 104 17 5 793 3164 35 43 0 chr13 27379943 27380337 -92903975 + IAPLTR2a LTR ERVK 1 411 0 5 793 949 115 98 11 chr13 27380339 27380523 -92903789 + IAPEz-int LTR ERVK 3 202 -1785 5 793 236 302 0 0 chr13 27380523 27380576 -92903736 + RLTR27 LTR ERVK 223 275 -34 5 793 3919 49 2 18 chr13 27380576 27381079 -92903233 + IAPEz-int LTR ERVK 168 662 -5819 5 793 2712 61 0 3 chr13 27381079 27381422 -92902890 + IAPEz-int LTR ERVK 1359 1700 -4781 5 793 6218 65 13 17 chr13 27381415 27382247 -92902065 + IAPEz-int LTR ERVK 5651 6479 -2 5 793 3088 31 62 0 chr13 27382249 27382636 -92901676 + IAPLTR2a LTR ERVK 1 411 0 5 793 995 334 31 24 chr13 27382661 27383078 -92901234 + RMER5 LTR ERV1 40 459 -75 5 793 215 245 0 0 chr13 27383124 27383177 -92901135 + A-rich Low_complexity Low_complexity 3 55 0 5 793 336 333 0 36 chr13 27383313 27383478 -92900834 - L1_Mur3 LINE L1 -1553 4327 4169 5 793 4083 107 2 3 chr13 27383655 27384244 -92900068 - Lx LINE L1 -8 6646 6059 5 793 4131 50 2 4 chr13 27385581 27386156 -92898156 + L1Md_F3 LINE L1 6047 6584 0 5 793 518 364 15 56 chr13 27386228 27386419 -92897893 + RMER15-int LTR ERVL 4155 4336 -663 5 793 387 136 0 100 chr13 27386419 27386509 -92897803 - L1Md_F2 LINE L1 0 6582 6502 5 793 518 364 15 56 chr13 27386509 27386655 -92897657 + RMER15-int LTR ERVL 4337 4478 -521 5 793 266 254 0 40 chr13 27387429 27387503 -92896809 + RMER15 LTR ERVL 356 426 -149 5 793 693 133 27 40 chr13 27387734 27387883 -92896429 + Lx2 LINE L1 6848 6994 -3 5 793 22 94 0 0 chr13 27388055 27388119 -92896193 + AT_rich Low_complexity Low_complexity 1 64 0 5 793 11168 151 13 13 chr13 27388297 27391338 -92892974 - Lx3C LINE L1 -7 6969 3928 5 793 810 0 0 0 chr13 27391340 27391430 -92892882 + (TTTC)n Simple_repeat Simple_repeat 1 90 0 5 793 529 99 0 0 chr13 27391431 27391512 -92892800 - Lx3C LINE L1 -4462 1424 1344 5 793 219 36 0 0 chr13 27391521 27391549 -92892763 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 793 218 148 19 0 chr13 27391561 27391615 -92892697 + (TTG)n Simple_repeat Simple_repeat 3 57 0 5 793 1097 82 0 20 chr13 27391632 27391782 -92892530 - B1_Mus2 SINE Alu 0 147 1 5 793 2925 179 14 0 chr13 27391795 27392359 -92891953 - Lx3C LINE L1 -5640 1344 773 5 793 375 208 132 31 chr13 27392432 27392561 -92891751 - Lx3C LINE L1 -6170 814 673 5 793 249 108 0 0 chr13 27392689 27392726 -92891586 + (TATG)n Simple_repeat Simple_repeat 3 39 0 5 793 302 246 0 0 chr13 27392726 27392795 -92891517 - L1_Rod LINE L1 -124 5723 5655 5 793 25 31 0 0 chr13 27393807 27393839 -92890473 + AT_rich Low_complexity Low_complexity 1 32 0 5 794 5436 52 0 1 chr13 27394074 27394753 -92889559 + L1Md_F2 LINE L1 4909 5586 -297 5 794 8021 45 2 1 chr13 27394753 27395734 -92888578 + L1Md_F2 LINE L1 5587 6568 -14 5 794 297 0 0 0 chr13 27395789 27395822 -92888490 + (T)n Simple_repeat Simple_repeat 1 33 0 5 794 567 313 119 11 chr13 27396023 27396394 -92887918 - L1M2 LINE L1 -951 5192 4782 5 794 439 295 92 37 chr13 27396391 27396662 -92887650 - L1MA5 LINE L1 -317 5983 5698 5 794 255 248 72 18 chr13 27399353 27399464 -92884848 - Lx9 LINE L1 -175 7469 7353 5 794 6570 140 7 1 chr13 27399777 27401502 -92882810 - L1_Mus4 LINE L1 -102 6534 4802 5 794 36 0 0 0 chr13 27403455 27403491 -92880821 + AT_rich Low_complexity Low_complexity 1 36 0 5 794 328 331 32 26 chr13 27404015 27404170 -92880142 + RMER15-int LTR ERVL 4834 4989 -10 5 794 354 315 64 35 chr13 27404535 27404706 -92879606 + RMER15 LTR ERVL 384 559 -16 5 794 180 0 0 0 chr13 27405120 27405140 -92879172 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 5 794 23 0 0 0 chr13 27407035 27407058 -92877254 + AT_rich Low_complexity Low_complexity 1 23 0 5 794 264 360 65 48 chr13 27407674 27407932 -92876380 + B4A SINE B4 20 275 -17 5 794 210 154 0 0 chr13 27408078 27408117 -92876195 + T-rich Low_complexity Low_complexity 1 39 0 5 794 189 0 0 0 chr13 27408401 27408422 -92875890 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 5 794 196 100 24 24 chr13 27414211 27414252 -92870060 + (TTC)n Simple_repeat Simple_repeat 2 42 0 5 794 28 48 0 0 chr13 27414607 27414649 -92869663 + AT_rich Low_complexity Low_complexity 1 42 0 5 794 215 298 0 0 chr13 27414887 27414944 -92869368 + A-rich Low_complexity Low_complexity 2 58 0 5 794 3312 53 5 2 chr13 27415521 27415940 -92868372 + L1Md_T LINE L1 6163 6582 0 5 794 665 382 24 24 chr13 27416462 27417011 -92867301 + Lx8 LINE L1 6246 6794 -679 5 794 316 236 14 0 chr13 27417152 27417229 -92867083 - B3 SINE B2 -117 81 4 5 794 516 277 53 20 chr13 27417532 27417683 -92866629 - RSINE1 SINE B4 -8 157 2 5 794 26 0 0 0 chr13 27417722 27417748 -92866564 + AT_rich Low_complexity Low_complexity 1 26 0 5 794 342 368 60 23 chr13 27418053 27418270 -92866042 + Lx8 LINE L1 7002 7226 -247 5 794 471 189 0 0 chr13 27418270 27418397 -92865915 + GA-rich Low_complexity Low_complexity 2 128 0 5 794 718 242 163 0 chr13 27419331 27419509 -92864803 + URR1B DNA MER1_type 1 207 -18 5 794 189 95 29 73 chr13 27419733 27419801 -92864511 + T-rich Low_complexity Low_complexity 2 66 0 5 794 6747 114 15 5 chr13 27419810 27420828 -92863484 - Lx3_Mus LINE L1 0 7009 5982 5 794 6528 102 99 4 chr13 27420833 27421887 -92862425 + Lx3_Mus LINE L1 4823 5977 -1032 5 794 261 83 0 0 chr13 27423120 27423156 -92861156 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 794 198 91 0 0 chr13 27425469 27425502 -92858810 + (T)n Simple_repeat Simple_repeat 1 33 0 5 794 252 264 47 9 chr13 27426462 27426487 -92857825 + Lx5 LINE L1 5755 5779 -1681 5 794 369 0 0 0 chr13 27426487 27426528 -92857784 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 794 320 195 45 3 chr13 27426528 27426652 -92857660 + Lx5 LINE L1 5751 5911 -1733 5 794 383 0 21 0 chr13 27426916 27426963 -92857349 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 794 738 276 34 29 chr13 27426990 27427195 -92857117 + Lx5 LINE L1 6805 7010 -40 5 794 222 37 0 0 chr13 27427206 27427233 -92857079 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 5 794 258 105 0 0 chr13 27427356 27427394 -92856918 + (A)n Simple_repeat Simple_repeat 1 38 0 5 794 2488 192 91 35 chr13 27428710 27429427 -92854885 + Lx5 LINE L1 5272 6026 -974 5 794 216 0 0 0 chr13 27429427 27429451 -92854861 + (TGGA)n Simple_repeat Simple_repeat 1 24 0 5 794 3952 242 30 14 chr13 27429451 27430400 -92853912 + Lx5 LINE L1 6027 7047 -3 5 794 269 218 0 83 chr13 27430539 27430659 -92853653 + (CATA)n Simple_repeat Simple_repeat 1 110 0 5 794 488 380 57 13 chr13 27430966 27431195 -92853117 + B4A SINE B4 50 288 -4 5 794 290 256 8 64 chr13 27431215 27431340 -92852972 + (CATATA)n Simple_repeat Simple_repeat 4 121 0 5 794 268 194 0 101 chr13 27431362 27431431 -92852881 - MTE2a LTR MaLR -20 359 298 5 794 263 299 11 0 chr13 27431871 27431958 -92852354 + (TATG)n Simple_repeat Simple_repeat 1 88 0 5 794 216 171 0 0 chr13 27431957 27431998 -92852314 + GA-rich Low_complexity Low_complexity 1 41 0 5 794 441 0 0 0 chr13 27432484 27432533 -92851779 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 794 3692 112 36 7 chr13 27432741 27433318 -92850994 - L1_Mus1 LINE L1 -479 5404 4811 5 794 7090 91 16 2 chr13 27433310 27434454 -92849858 + L1_Mus1 LINE L1 5407 6564 -3 5 794 210 289 0 0 chr13 27436204 27436280 -92848032 + T-rich Low_complexity Low_complexity 1 76 0 5 794 1011 112 0 17 chr13 27436280 27436453 -92847859 + (TCC)n Simple_repeat Simple_repeat 3 172 0 5 794 3320 30 8 0 chr13 27436636 27437029 -92847283 + MTA_Mm LTR MaLR 1 396 0 5 794 21 0 0 0 chr13 27437349 27437370 -92846942 + AT_rich Low_complexity Low_complexity 1 21 0 5 794 3066 174 96 7 chr13 27437875 27438449 -92845863 - Lx3B LINE L1 0 6973 6349 5 794 2799 52 85 0 chr13 27439018 27439384 -92844928 - L1Md_F2 LINE L1 -14 6568 6172 5 794 336 111 0 0 chr13 27441168 27441222 -92843090 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 6 794 301 358 32 26 chr13 27441240 27441395 -92842917 + HAL1-3A_ME LINE L1 2284 2439 -419 6 794 413 36 18 0 chr13 27441395 27441450 -92842862 + (GAAA)n Simple_repeat Simple_repeat 1 56 0 6 794 243 288 12 0 chr13 27441458 27441538 -92842774 + GA-rich Low_complexity Low_complexity 3 83 0 6 794 495 0 0 0 chr13 27441538 27441593 -92842719 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 794 623 67 11 0 chr13 27441597 27441686 -92842626 + (GGAA)n Simple_repeat Simple_repeat 4 93 0 6 794 24 100 0 0 chr13 27442185 27442265 -92842047 + AT_rich Low_complexity Low_complexity 1 80 0 6 794 25 75 0 0 chr13 27442739 27442792 -92841520 + AT_rich Low_complexity Low_complexity 1 53 0 6 794 189 0 0 0 chr13 27442980 27443001 -92841311 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 794 21 0 0 0 chr13 27443739 27443760 -92840552 + AT_rich Low_complexity Low_complexity 1 21 0 6 794 1227 196 5 0 chr13 27444935 27445154 -92839158 + URR1A DNA MER1_type 7 226 0 6 794 24 0 0 0 chr13 27446484 27446508 -92837804 + AT_rich Low_complexity Low_complexity 1 24 0 6 794 8217 130 16 10 chr13 27446508 27448749 -92835563 + Lx3B LINE L1 4720 6969 -4 6 794 744 303 24 20 chr13 27449192 27449438 -92834874 + Lx9 LINE L1 7013 7259 -385 6 794 2002 260 23 16 chr13 27449852 27450390 -92833922 - Lx3C LINE L1 -74 6984 6355 6 794 2568 183 47 11 chr13 27450506 27451074 -92833238 + L1_Mus3 LINE L1 214 1090 -5894 6 794 35497 48 10 0 chr13 27451064 27456318 -92827994 + L1Md_T LINE L1 281 5586 -297 6 794 8128 46 1 0 chr13 27456318 27457313 -92826999 + L1Md_T LINE L1 5587 6582 0 6 794 192 152 0 0 chr13 27457346 27457379 -92826933 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 794 12227 115 11 12 chr13 27457388 27459428 -92824884 + L1_Mus3 LINE L1 1132 3169 -2717 6 794 34372 52 4 7 chr13 27459418 27464661 -92819651 + L1Md_Gf LINE L1 261 5589 -297 6 794 8150 41 1 10 chr13 27464661 27465666 -92818646 + L1Md_T LINE L1 5587 6582 0 6 794 34372 50 5 3 chr13 27465666 27465687 -92818625 + L1Md_Gf LINE L1 5590 5607 -279 6 794 18038 103 9 19 chr13 27465670 27468456 -92815856 + L1_Mus3 LINE L1 3153 5907 -1151 6 794 783 32 0 0 chr13 27468456 27468550 -92815762 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 6 794 6242 132 23 5 chr13 27468550 27469152 -92815160 + L1_Mus3 LINE L1 5262 6000 -1058 6 794 264 30 0 0 chr13 27469152 27469185 -92815127 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 6 794 6242 129 21 7 chr13 27469185 27469915 -92814397 + L1_Mus3 LINE L1 5860 6603 -35 6 794 3694 108 5 8 chr13 27469913 27470630 -92813682 - L1VL4 LINE L1 -2130 1429 716 6 794 334 152 83 28 chr13 27470863 27470971 -92813341 + Lx9 LINE L1 7531 7644 0 6 794 4222 98 2 13 chr13 27471687 27472289 -92812023 + L1_Mus2 LINE L1 5971 6565 -1 6 794 436 341 58 23 chr13 27472300 27472609 -92811703 + L1M2 LINE L1 4359 4678 -1465 6 794 429 54 0 0 chr13 27472915 27472971 -92811341 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 794 514 319 132 19 chr13 27473018 27473533 -92810779 - L1M2 LINE L1 -2031 4115 3543 6 794 216 97 0 0 chr13 27475086 27475117 -92809195 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 794 28 86 0 0 chr13 27475537 27475607 -92808705 + AT_rich Low_complexity Low_complexity 1 70 0 6 794 1189 106 50 0 chr13 27475736 27475915 -92808397 - B2_Mm2 SINE B2 -7 188 1 6 794 1731 232 76 37 chr13 27476191 27476785 -92807527 - Lx9 LINE L1 -2 7642 7026 6 794 465 19 0 0 chr13 27476817 27476871 -92807441 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 794 441 0 0 0 chr13 27476876 27476925 -92807387 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 794 279 140 0 0 chr13 27477551 27477601 -92806711 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 6 794 420 20 0 0 chr13 27477603 27477652 -92806660 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 794 733 329 51 44 chr13 27478452 27479042 -92805270 + Lx9 LINE L1 6667 7415 -229 6 794 666 37 0 0 chr13 27479089 27479170 -92805142 + (GA)n Simple_repeat Simple_repeat 2 82 0 6 794 21 0 0 0 chr13 27480039 27480060 -92804252 + AT_rich Low_complexity Low_complexity 1 21 0 6 794 318 311 0 28 chr13 27482585 27482691 -92801621 - RMER15 LTR ERVL -137 438 336 6 794 365 310 40 27 chr13 27483245 27483394 -92800918 - Lx8 LINE L1 -745 6728 6578 6 794 508 246 16 56 chr13 27483865 27483990 -92800322 + URR1A DNA MER1_type 1 120 -106 6 794 835 353 77 30 chr13 27484231 27484923 -92799389 + MTEb-int LTR MaLR 810 1572 -8 6 794 643 332 85 19 chr13 27484938 27485286 -92799026 + MTEb LTR MaLR 9 379 0 6 794 4793 161 27 14 chr13 27486011 27486628 -92797684 - Lx2B LINE L1 -3 6997 6363 6 794 2084 149 0 0 chr13 27486628 27486951 -92797361 - ORR1A2 LTR MaLR -4 323 1 6 794 4793 161 27 14 chr13 27486951 27487185 -92797127 - Lx2B LINE L1 -638 6362 6135 6 794 2238 177 30 2 chr13 27487186 27487583 -92796729 - Lx4A LINE L1 -271 6787 6380 6 794 984 141 309 13 chr13 27487570 27487797 -92796515 + Lx4A LINE L1 5493 5786 -1272 6 794 591 154 0 19 chr13 27488013 27488119 -92796193 + L1_Mur1 LINE L1 5341 5444 -442 6 794 485 362 62 20 chr13 27488254 27488654 -92795658 - Lx8 LINE L1 -453 7020 6604 6 794 399 366 73 27 chr13 27489063 27489324 -92794988 - B4A SINE B4 -18 274 2 6 794 211 139 23 0 chr13 27490221 27490264 -92794048 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 794 315 291 0 0 chr13 27490340 27490419 -92793893 - MTE2b LTR MaLR -300 79 1 6 794 1165 256 133 53 chr13 27490641 27491077 -92793235 + RLTR20A2 LTR ERVK 1 476 -102 6 794 249 57 0 0 chr13 27491077 27491112 -92793200 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 794 1133 256 134 53 chr13 27491112 27491202 -92793110 + RLTR20A2 LTR ERVK 464 567 -1 6 794 753 223 83 47 chr13 27491768 27492046 -92792266 + RMER3D-int LTR ERVK 1090 1377 -1465 6 794 977 201 9 18 chr13 27492056 27492279 -92792033 + MYSERV16_I-int LTR ERVK 277 497 -1829 6 794 661 157 34 0 chr13 27492259 27492406 -92791906 + MYSERV16_I-int LTR ERVK 2101 2252 -74 6 794 1154 275 112 64 chr13 27492480 27492783 -92791529 + RLTR20D LTR ERVK 3 333 -235 6 794 3042 57 0 0 chr13 27492783 27493166 -92791146 + L1Md_F2 LINE L1 6194 6576 -6 6 794 1154 275 112 64 chr13 27493166 27493298 -92791014 + RLTR20D LTR ERVK 334 464 -104 6 794 585 28 0 0 chr13 27493298 27493369 -92790943 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 794 1154 275 112 64 chr13 27493369 27493461 -92790851 + RLTR20D LTR ERVK 465 554 -14 6 794 350 333 21 28 chr13 27493489 27493634 -92790678 + ORR1D2 LTR MaLR 227 370 0 6 794 396 317 75 54 chr13 27493654 27493894 -92790418 - MTE-int LTR MaLR -39 1541 1297 6 794 1070 214 45 5 chr13 27494530 27494751 -92789561 - MTC LTR MaLR -9 412 183 6 794 273 207 0 0 chr13 27494771 27494829 -92789483 - MTC LTR MaLR -363 58 1 6 794 210 150 0 0 chr13 27495444 27495484 -92788828 + (GAAA)n Simple_repeat Simple_repeat 4 43 0 6 794 4074 70 66 9 chr13 27496864 27497424 -92786888 + L1_Mus2 LINE L1 5975 6566 0 6 794 1030 333 19 0 chr13 27497677 27498001 -92786311 - Lx8 LINE L1 -786 6687 6358 6 794 318 319 148 8 chr13 27498065 27498302 -92786010 - L1MD LINE L1 -2981 3165 2896 6 794 430 360 43 29 chr13 27499115 27499324 -92784988 - B4A SINE B4 -79 213 2 6 794 379 287 98 66 chr13 27499388 27499901 -92784411 - L1M2 LINE L1 -1218 4922 4398 6 794 25 51 0 0 chr13 27500039 27500078 -92784234 + AT_rich Low_complexity Low_complexity 1 39 0 1 794 2279 153 41 3 chr13 27500131 27500518 -92783794 + Lx2 LINE L1 6596 6997 0 2 794 538 384 71 20 chr13 27500745 27501151 -92783161 - Lx8 LINE L1 -398 7075 6649 3 794 407 311 107 24 chr13 27501221 27501760 -92782552 - L1M2 LINE L1 -1827 4316 3687 4 794 299 159 0 0 chr13 27502398 27502461 -92781851 - Lx2 LINE L1 0 6997 6935 5 794 210 37 0 0 chr13 27502548 27502575 -92781737 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 794 967 354 20 5 chr13 27502632 27503024 -92781288 - MTE-int LTR MaLR -388 1192 795 7 794 977 292 94 13 chr13 27503602 27503931 -92780381 - MTD LTR MaLR -31 388 14 8 794 2191 111 30 3 chr13 27504063 27504396 -92779916 - L1_Mus4 LINE L1 -242 6394 6053 9 794 3021 159 56 8 chr13 27504720 27505241 -92779071 + MT2B LTR ERVL 49 594 -7 1 794 1280 214 29 18 chr13 27505245 27505526 -92778786 - Lx5 LINE L1 -287 6763 6480 1 794 1235 303 63 36 chr13 27506216 27506743 -92777569 - Lx9 LINE L1 -799 6845 6305 1 794 22 35 0 0 chr13 27506774 27506803 -92777509 + AT_rich Low_complexity Low_complexity 1 29 0 1 794 289 254 50 17 chr13 27506810 27506930 -92777382 - L1MD LINE L1 -816 5330 5207 1 794 329 338 90 9 chr13 27507154 27507575 -92776737 - L1M2 LINE L1 -2846 3297 2843 1 794 1136 197 36 108 chr13 27509105 27509384 -92774928 + RLTR25B LTR ERVK 21 279 -749 1 794 2071 205 33 0 chr13 27509413 27509833 -92774479 + RLTR19C LTR ERVK 72 505 -1 1 794 278 132 38 0 chr13 27509833 27509872 -92774440 + RLTR25A LTR ERVK 1063 1103 0 1 794 607 113 22 22 chr13 27510032 27510168 -92774144 + (TAGA)n Simple_repeat Simple_repeat 3 138 0 1 794 347 73 18 0 chr13 27510243 27510298 -92774014 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 2 794 612 318 28 19 chr13 27510760 27510975 -92773337 - RLTR16 LTR ERVK -265 240 24 2 794 1285 206 38 76 chr13 27511002 27511344 -92772968 - ORR1A4 LTR MaLR 0 329 1 2 794 4302 217 38 5 chr13 27511346 27512490 -92771822 - ORR1A4-int LTR MaLR -191 1772 898 2 794 1135 228 55 11 chr13 27512493 27512768 -92771544 - ORR1A4 LTR MaLR -80 287 1 2 794 525 183 0 28 chr13 27512768 27512875 -92771437 + L1_Mur3 LINE L1 5598 5701 -179 2 794 886 342 63 5 chr13 27512862 27513229 -92771083 + Lx6 LINE L1 6971 7358 -102 2 794 40 0 0 0 chr13 27513235 27513275 -92771037 + AT_rich Low_complexity Low_complexity 1 40 0 2 794 250 68 0 22 chr13 27513306 27513480 -92770832 - L1Md_F2 LINE L1 0 6582 6530 2 794 635 243 0 40 chr13 27513480 27513630 -92770682 + Lx9 LINE L1 6996 7139 -505 2 794 6642 73 48 4 chr13 27513631 27514534 -92769778 - L1Md_F2 LINE L1 -1 6581 5640 2 794 1960 158 10 0 chr13 27514529 27514840 -92769472 - Lx2 LINE L1 -23 6974 6661 2 794 1332 233 57 70 chr13 27514842 27515211 -92769101 + L1VL4 LINE L1 183 546 -5756 3 794 7840 120 18 7 chr13 27515193 27516746 -92767566 + L1VL4 LINE L1 673 2238 -1321 3 794 24 32 0 0 chr13 27516816 27516847 -92767465 + AT_rich Low_complexity Low_complexity 1 31 0 3 794 226 300 17 0 chr13 27516906 27516966 -92767346 + Lx9 LINE L1 6579 6639 -1005 3 794 7412 128 13 38 chr13 27516993 27518148 -92766164 - L1_Mur1 LINE L1 -73 5813 4662 3 794 205 51 25 25 chr13 27518148 27518188 -92766124 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 3 794 7412 142 12 41 chr13 27518188 27518330 -92765982 - L1_Mur1 LINE L1 -1459 4687 4563 3 794 267 260 89 0 chr13 27518375 27518498 -92765814 + Lx9 LINE L1 7504 7637 -7 3 794 545 257 32 5 chr13 27518807 27518988 -92765324 + Lx7 LINE L1 7523 7680 -16 3 794 373 367 8 0 chr13 27519000 27519120 -92765192 + B3 SINE B2 2 122 -94 3 794 376 372 13 4 chr13 27520208 27520435 -92763877 + RLTR6-int LTR ERV1 3946 4174 -3432 3 794 377 337 23 29 chr13 27520458 27520632 -92763680 + RLTR6-int LTR ERV1 4357 4529 -3249 3 794 1857 209 74 64 chr13 27521171 27521686 -92762626 + RMER2 LTR ERV1 1 520 -47 3 794 5146 223 52 9 chr13 27522137 27523995 -92760317 + Lx5 LINE L1 4815 6790 -260 3 794 25 0 0 0 chr13 27524261 27524286 -92760026 + AT_rich Low_complexity Low_complexity 1 25 0 4 794 21 0 0 0 chr13 27524718 27524739 -92759573 + AT_rich Low_complexity Low_complexity 1 21 0 4 795 1294 178 0 0 chr13 27525646 27525871 -92758441 - URR1A DNA MER1_type 0 226 2 4 795 216 0 0 0 chr13 27526968 27526992 -92757320 + (A)n Simple_repeat Simple_repeat 1 24 0 4 795 21 0 0 0 chr13 27527786 27527807 -92756505 + AT_rich Low_complexity Low_complexity 1 21 0 4 795 621 72 0 0 chr13 27528388 27528471 -92755841 + (TC)n Simple_repeat Simple_repeat 1 83 0 4 795 192 141 46 15 chr13 27529186 27529251 -92755061 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 4 795 367 344 30 22 chr13 27529971 27530105 -92754207 - MER20 DNA MER1_type -4 215 81 4 795 3844 134 1 1 chr13 27530977 27531759 -92752553 + L1_Mus4 LINE L1 5217 5998 -638 4 795 7846 36 1 4 chr13 27531759 27532714 -92751598 - L1Md_F3 LINE L1 0 6584 5633 4 795 3943 119 43 6 chr13 27532724 27533348 -92750964 + L1_Mus4 LINE L1 5982 6628 -8 4 795 23 0 0 0 chr13 27533355 27533378 -92750934 + AT_rich Low_complexity Low_complexity 1 23 0 5 795 4597 235 49 11 chr13 27533940 27535052 -92749260 - Lx2B LINE L1 0 7000 5847 5 795 708 184 9 0 chr13 27535052 27535195 -92749117 + B2_Mm2 SINE B2 17 161 -32 5 795 5343 91 5 1 chr13 27536055 27536792 -92747520 - L1_Mus3 LINE L1 -7 6631 5892 5 795 189 0 0 0 chr13 27537147 27537168 -92747144 + (T)n Simple_repeat Simple_repeat 1 21 0 5 795 1047 122 0 0 chr13 27537168 27537315 -92746997 - B1_Mus1 SINE Alu 0 148 2 5 795 1717 146 86 3 chr13 27537668 27537970 -92746342 + IAPEY3_LTR LTR ERVK 1 327 -5 5 795 10636 108 28 1 chr13 27537975 27539520 -92744792 + IAPEY3-int LTR ERVK 3 1588 -6092 5 795 31053 101 13 3 chr13 27539516 27543904 -92740408 + IAPEY3-int LTR ERVK 2831 7263 -417 5 795 1471 185 19 34 chr13 27543932 27544257 -92740055 + IAPEY3-int LTR ERVK 7345 7664 -16 5 795 1719 136 86 3 chr13 27544291 27544593 -92739719 + IAPEY3_LTR LTR ERVK 1 327 -5 5 795 356 256 164 38 chr13 27544825 27545008 -92739304 + B3 SINE B2 1 206 -10 5 795 736 175 0 70 chr13 27545895 27546067 -92738245 - RMER17A LTR ERVK -469 282 123 5 795 180 125 0 0 chr13 27546242 27546274 -92738038 + (A)n Simple_repeat Simple_repeat 1 32 0 5 795 342 361 86 16 chr13 27546413 27546599 -92737713 + B3 SINE B2 9 207 -9 6 795 631 317 83 19 chr13 27546707 27547019 -92737293 + Lx8 LINE L1 6262 6593 -880 6 795 2794 206 117 41 chr13 27547019 27547804 -92736508 + RMER17D LTR ERVK 1 845 -44 6 795 23 33 0 0 chr13 27547953 27547983 -92736329 + AT_rich Low_complexity Low_complexity 1 30 0 6 795 30 45 0 0 chr13 27548625 27548669 -92735643 + AT_rich Low_complexity Low_complexity 1 44 0 6 795 406 297 63 35 chr13 27549784 27549860 -92734452 - RLTR20C LTR ERVK -16 562 492 6 795 270 0 0 0 chr13 27549860 27549890 -92734422 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 795 818 215 99 68 chr13 27549890 27550237 -92734075 - RLTR20C LTR ERVK -240 328 9 6 795 1742 174 66 5 chr13 27550237 27550952 -92733360 - MYSERV16_I-int LTR ERVK -433 1893 1060 6 795 3234 205 83 41 chr13 27550944 27551989 -92732323 - MYSERV16_I-int LTR ERVK -1463 1379 1 6 795 4203 94 0 5 chr13 27552075 27552653 -92731659 - L1_Mus1 LINE L1 0 6567 5993 6 795 3355 75 0 5 chr13 27552654 27553097 -92731215 + L1Md_F2 LINE L1 6129 6569 -13 6 795 2960 169 4 12 chr13 27553401 27553903 -92730409 - RLTR26 LTR ERVK -144 498 1 7 795 2623 175 56 16 chr13 27554047 27554546 -92729766 - RLTR11A LTR ERVK 0 528 10 7 795 374 261 84 0 chr13 27554862 27555004 -92729308 + Lx7 LINE L1 7523 7676 -20 7 795 494 321 7 14 chr13 27555050 27555189 -92729123 + B3 SINE B2 2 139 -77 7 795 521 256 20 32 chr13 27555220 27555372 -92728940 - MTC LTR MaLR -250 150 5 7 795 633 188 205 84 chr13 27555421 27555636 -92728676 + RMER2 LTR ERV1 1 241 -326 7 795 3940 237 28 10 chr13 27555639 27556541 -92727771 + Lx5 LINE L1 5870 6787 -263 7 795 25 0 0 0 chr13 27556810 27556835 -92727477 + AT_rich Low_complexity Low_complexity 1 25 0 7 795 532 267 9 6 chr13 27558762 27558938 -92725374 - MuLV-int LTR ERV1 -301 7305 7159 7 795 3564 346 70 66 chr13 27560367 27564637 -92719675 - MuLV-int LTR ERV1 -2017 5589 1302 7 795 333 194 0 0 chr13 27564637 27564699 -92719613 - Lx2B LINE L1 -253 6747 6686 7 795 21 71 0 0 chr13 27566854 27566896 -92717416 + AT_rich Low_complexity Low_complexity 1 42 0 8 795 296 316 0 26 chr13 27567921 27567999 -92716313 + B3 SINE B2 130 205 -11 8 795 319 381 54 39 chr13 27568793 27569072 -92715240 + Lx8 LINE L1 7078 7360 -113 8 795 416 361 78 10 chr13 27569314 27569507 -92714805 + B3 SINE B2 1 206 -10 8 795 1743 345 102 21 chr13 27569613 27570338 -92713974 + Lx8 LINE L1 6246 7040 -433 8 795 264 59 0 0 chr13 27570338 27570372 -92713940 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 8 795 1743 345 102 21 chr13 27570372 27570781 -92713531 + Lx8 LINE L1 7041 7472 -1 8 795 183 42 0 0 chr13 27571315 27571339 -92712973 + (TTATA)n Simple_repeat Simple_repeat 5 28 0 8 795 2184 183 36 2 chr13 27572490 27573372 -92710940 - MYSERV16_I-int LTR ERVK -274 2052 1067 8 795 403 111 12 24 chr13 27573377 27573460 -92710852 - MYSERV16_I-int LTR ERVK -1394 932 851 8 795 2218 182 0 112 chr13 27573460 27573830 -92710482 - RLTR26 LTR ERVK 0 642 326 8 795 5060 51 2 2 chr13 27573830 27574457 -92709855 - L1Md_F2 LINE L1 0 6582 5956 8 795 2218 182 0 112 chr13 27574457 27574576 -92709736 - RLTR26 LTR ERVK -317 325 208 8 795 231 154 0 0 chr13 27574569 27574608 -92709704 - RLTR26 LTR ERVK -603 39 1 8 795 3380 201 63 41 chr13 27574608 27575583 -92708729 - MYSERV16_I-int LTR ERVK -1463 1379 5 8 795 903 220 36 9 chr13 27576248 27576468 -92707844 - L1_Mur2 LINE L1 -193 5684 5459 9 795 245 232 219 25 chr13 27576468 27576575 -92707737 - RLTR20C LTR ERVK -421 130 9 9 795 30 27 0 0 chr13 27576575 27576612 -92707700 + AT_rich Low_complexity Low_complexity 1 37 0 9 795 7330 169 80 12 chr13 27576975 27578532 -92705780 - Lx2B LINE L1 -5 6995 5325 9 795 7992 160 112 62 chr13 27578541 27580587 -92703725 + L1VL4 LINE L1 549 2920 -2963 9 795 891 240 23 14 chr13 27580587 27580807 -92703505 + RMER17B LTR ERVK 737 958 0 9 795 7992 160 112 62 chr13 27580807 27581835 -92702477 + L1VL4 LINE L1 2921 4114 -1769 9 795 17165 202 30 11 chr13 27581838 27585645 -92698667 - Lx2B LINE L1 -592 5294 1410 9 795 372 22 0 0 chr13 27585645 27585690 -92698622 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 9 795 17165 205 18 19 chr13 27585690 27586287 -92698025 - Lx2B LINE L1 -4477 1409 818 9 795 360 316 109 17 chr13 27586635 27586754 -92697558 - B3 SINE B2 -37 179 50 9 795 2519 252 182 46 chr13 27587450 27588079 -92696233 + RLTR25A LTR ERVK 5 676 -427 9 795 450 0 0 0 chr13 27588079 27588129 -92696183 + (TA)n Simple_repeat Simple_repeat 1 50 0 9 795 2519 252 182 46 chr13 27588129 27588427 -92695885 + RLTR25A LTR ERVK 677 1063 -40 9 795 2222 173 25 65 chr13 27588427 27588953 -92695359 + RLTR19C LTR ERVK 1 505 -1 1 795 2519 252 182 46 chr13 27588953 27588984 -92695328 + RLTR25A LTR ERVK 1064 1094 -9 9 795 375 182 41 12 chr13 27589145 27589317 -92694995 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 1 795 243 0 0 0 chr13 27589391 27589418 -92694894 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 795 1427 211 9 67 chr13 27589418 27589759 -92694553 - ORR1A4 LTR MaLR -8 321 1 1 795 4149 194 77 109 chr13 27589759 27590380 -92693932 - ORR1A4-int LTR MaLR 0 1963 1412 1 795 971 64 0 35 chr13 27590380 27590525 -92693787 - L1Md_F2 LINE L1 -2 6580 6441 1 795 4149 194 77 109 chr13 27590525 27591035 -92693277 - ORR1A4-int LTR MaLR -552 1411 870 1 795 773 230 53 14 chr13 27591003 27591210 -92693102 - ORR1A4 LTR MaLR -85 282 68 1 795 207 0 0 0 chr13 27591210 27591233 -92693079 + (A)n Simple_repeat Simple_repeat 1 23 0 1 795 2698 178 52 169 chr13 27591233 27591655 -92692657 + Lx3_Mus LINE L1 6117 6559 -450 1 795 377 258 60 8 chr13 27591655 27591788 -92692524 - ORR1B1 LTR MaLR -186 208 69 1 795 2698 178 52 169 chr13 27591788 27592064 -92692248 + Lx3_Mus LINE L1 6560 6850 -159 1 795 389 102 14 14 chr13 27592461 27592531 -92691781 + Lx7 LINE L1 7523 7592 -104 1 795 603 321 172 6 chr13 27593074 27593428 -92690884 + MTC LTR MaLR 1 413 -8 1 795 4346 216 60 55 chr13 27593571 27594384 -92689928 + Lx5 LINE L1 4593 5401 -476 1 795 2188 66 149 0 chr13 27594384 27594685 -92689627 - ORR1A1 LTR MaLR 0 346 1 1 795 12647 81 8 29 chr13 27594685 27596154 -92688158 - ORR1A1-int LTR MaLR 0 1792 368 1 795 1059 116 0 0 chr13 27596154 27596301 -92688011 - B1_Mus1 SINE Alu -1 147 1 1 795 12647 81 8 29 chr13 27596301 27596662 -92687650 - ORR1A1-int LTR MaLR -1425 367 1 1 795 2175 65 118 19 chr13 27596662 27596977 -92687335 - ORR1A1 LTR MaLR 0 346 1 1 795 4346 234 59 40 chr13 27596977 27598315 -92685997 + Lx5 LINE L1 5402 6790 -260 1 795 1165 200 4 0 chr13 27599852 27600077 -92684235 - URR1A DNA MER1_type 0 226 1 1 795 186 43 0 0 chr13 27600146 27600169 -92684143 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 795 229 26 53 0 chr13 27600698 27600736 -92683576 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 1 795 24 0 0 0 chr13 27601266 27601290 -92683022 + AT_rich Low_complexity Low_complexity 1 24 0 1 795 34 65 0 0 chr13 27602078 27602140 -92682172 + AT_rich Low_complexity Low_complexity 1 62 0 1 795 4508 36 0 0 chr13 27602485 27603015 -92681297 - L1Md_T LINE L1 -1 6581 6052 1 795 540 0 0 0 chr13 27603138 27603198 -92681114 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 795 266 362 23 16 chr13 27604555 27604684 -92679628 - MER20 DNA MER1_type -5 214 85 1 795 1562 117 4 4 chr13 27606085 27606317 -92677995 + MTA_Mm LTR MaLR 1 232 -164 1 795 724 87 0 19 chr13 27606316 27606421 -92677891 + ORR1A1-int LTR MaLR 1690 1792 0 1 795 2469 88 9 0 chr13 27606421 27606764 -92677548 + ORR1A1 LTR MaLR 1 346 0 1 795 1196 126 5 5 chr13 27607111 27607303 -92677009 + MTA_Mm LTR MaLR 209 400 0 1 795 4520 244 29 9 chr13 27607425 27608556 -92675756 - Lx2B LINE L1 0 7000 5847 1 795 720 237 0 7 chr13 27608556 27608709 -92675603 + B2_Mm2 SINE B2 17 168 -27 1 795 235 140 23 23 chr13 27609754 27609798 -92674514 + MT2B2 LTR ERVL 274 317 -267 1 795 21 36 0 0 chr13 27610268 27610296 -92674016 + AT_rich Low_complexity Low_complexity 1 28 0 1 795 15281 180 78 58 chr13 27611802 27616135 -92668177 + Lx LINE L1 1769 6197 -457 1 795 473 309 21 10 chr13 27616138 27616332 -92667980 + Lx8 LINE L1 6662 7000 -644 1 795 1066 96 0 0 chr13 27616332 27616467 -92667845 + B1_Mus2 SINE Alu 2 136 -11 1 795 350 21 0 21 chr13 27616467 27616515 -92667797 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 795 998 78 0 7 chr13 27616694 27616836 -92667476 + (GAAA)n Simple_repeat Simple_repeat 1 141 0 1 795 6612 156 44 6 chr13 27617799 27619317 -92664995 - Lx LINE L1 -8 6646 5042 1 795 251 41 0 0 chr13 27619317 27619350 -92664962 + Lx LINE L1 5577 5615 -1039 1 795 399 162 28 0 chr13 27619338 27619426 -92664886 - Lx LINE L1 -1276 4870 4760 1 795 5172 158 15 9 chr13 27619419 27620402 -92663910 - L1VL2 LINE L1 -1022 2593 1605 1 795 5305 93 30 73 chr13 27620406 27621329 -92662983 + RMER17D LTR ERVK 1 884 -5 1 795 4926 147 19 3 chr13 27621333 27622817 -92661495 - L1VL2 LINE L1 -2009 1606 94 1 795 632 128 18 0 chr13 27623075 27623184 -92661128 + (TTTTC)n Simple_repeat Simple_repeat 3 113 0 1 795 485 285 69 41 chr13 27624409 27624663 -92659649 - RLTR20D LTR ERVK -259 275 24 1 795 3120 179 35 2 chr13 27624667 27625739 -92658573 - MYSERV16_I-int LTR ERVK -75 2251 1070 1 795 3491 210 68 35 chr13 27625746 27626645 -92657667 - MYSERV16_I-int LTR ERVK -1393 933 5 1 795 2352 201 48 12 chr13 27627466 27627964 -92656348 - L1_Mur1 LINE L1 -193 5693 5178 1 795 952 193 6 0 chr13 27627965 27628146 -92656166 + Lx2 LINE L1 6670 6851 -146 1 795 34632 72 1 2 chr13 27628152 27633624 -92650688 - L1Md_F2 LINE L1 -14 6568 1108 1 795 6587 89 3 4 chr13 27633592 27634492 -92649820 - L1Md_F2 LINE L1 -5411 1205 307 1 795 358 288 40 73 chr13 27634793 27634943 -92649369 - RLTR20A1 LTR ERVK 0 551 407 1 795 8668 85 7 31 chr13 27634943 27636612 -92647700 + L1Md_A LINE L1 4013 5586 -297 1 795 8370 34 0 0 chr13 27636612 27637606 -92646706 + L1Md_A LINE L1 5587 6580 -2 1 795 261 57 0 0 chr13 27637807 27637842 -92646470 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 795 1768 288 84 45 chr13 27637855 27637986 -92646326 + Lx9 LINE L1 6580 6702 -942 1 795 1142 61 0 20 chr13 27637986 27638136 -92646176 + B1_Mm SINE Alu 1 147 0 1 795 1768 288 84 45 chr13 27638136 27638773 -92645539 + Lx9 LINE L1 6703 7378 -266 1 795 2026 93 31 65 chr13 27638787 27639142 -92645170 - RLTR45 LTR ERVK -139 343 1 1 795 3081 171 27 8 chr13 27639142 27639739 -92644573 - L1_Mur2 LINE L1 -1794 4083 3476 1 795 2611 127 9 11 chr13 27639748 27640021 -92644291 - MusHAL1 LINE L1 -584 2128 1858 1 795 905 64 0 8 chr13 27640021 27640147 -92644165 + (TCC)n Simple_repeat Simple_repeat 2 126 0 1 795 2611 127 9 11 chr13 27640147 27640327 -92643985 - MusHAL1 LINE L1 -855 1857 1676 1 795 3139 183 39 2 chr13 27640336 27640955 -92643357 + L1_Mur2 LINE L1 4244 4885 -992 1 795 939 94 64 14 chr13 27640957 27641097 -92643215 + B1_Mm SINE Alu 1 147 0 1 795 6345 128 32 12 chr13 27641140 27642187 -92642125 + Lx LINE L1 5587 6654 0 1 795 342 362 60 73 chr13 27642592 27642893 -92641419 - ORR1D2 LTR MaLR 0 370 74 1 795 2336 210 54 18 chr13 27643107 27643606 -92640706 - RLTR11A LTR ERVK -5 523 7 1 795 458 242 61 37 chr13 27643932 27644095 -92640217 + Lx7 LINE L1 7529 7695 -1 1 795 385 344 56 46 chr13 27644112 27644307 -92640005 + B3A SINE B2 2 198 0 1 795 414 0 0 0 chr13 27644456 27644502 -92639810 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 795 38 68 0 0 chr13 27644750 27644823 -92639489 + AT_rich Low_complexity Low_complexity 1 73 0 1 795 1162 206 13 0 chr13 27645407 27645635 -92638677 - ORR1B1 LTR MaLR -162 232 2 1 795 910 292 146 6 chr13 27645834 27646196 -92638116 - MTD LTR MaLR 0 419 7 1 795 1116 200 156 65 chr13 27646822 27647175 -92637137 + L1_Mur3 LINE L1 4326 4710 -1170 1 795 977 269 17 0 chr13 27647173 27647407 -92636905 + Lx5 LINE L1 6811 7048 -2 1 795 704 280 131 3 chr13 27648478 27648761 -92635551 - Lx9 LINE L1 -308 7336 7018 1 795 1099 83 0 0 chr13 27649316 27649461 -92634851 + B1_Mus1 SINE Alu 2 146 -2 1 795 1065 223 5 0 chr13 27650781 27651005 -92633307 - URR1A DNA MER1_type 0 226 2 1 795 186 292 80 96 chr13 27651032 27651157 -92633155 + L3 LINE CR1 2103 2225 -2264 1 795 24 0 0 0 chr13 27652193 27652217 -92632095 + AT_rich Low_complexity Low_complexity 1 24 0 1 795 23 0 0 0 chr13 27653013 27653036 -92631276 + AT_rich Low_complexity Low_complexity 1 23 0 1 795 680 223 0 6 chr13 27653137 27653304 -92631008 + Lx LINE L1 6487 6652 -2 1 795 1266 49 0 0 chr13 27653731 27653893 -92630419 + (TTTC)n Simple_repeat Simple_repeat 3 164 0 1 795 3304 63 0 7 chr13 27655379 27655807 -92628505 - L1Md_F3 LINE L1 -14 6570 6146 1 795 280 320 13 0 chr13 27655979 27656057 -92628255 - MER20 DNA MER1_type -48 171 93 1 796 4975 154 10 22 chr13 27657503 27658373 -92625939 + Lx3C LINE L1 6114 6973 -3 1 796 640 281 37 17 chr13 27658496 27658792 -92625520 - Lx2B LINE L1 -4 6972 6669 1 796 185 108 0 26 chr13 27659978 27660016 -92624296 + (TCTCTG)n Simple_repeat Simple_repeat 3 39 0 1 796 180 200 0 0 chr13 27660029 27660069 -92624243 + (CATA)n Simple_repeat Simple_repeat 3 42 0 1 796 1779 149 11 0 chr13 27661100 27661375 -92622937 + L1_Mm LINE L1 5502 5779 -104 1 796 620 134 36 18 chr13 27661905 27662072 -92622240 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 1 796 5162 99 23 14 chr13 27662188 27663630 -92620682 + L1Md_F2 LINE L1 364 1817 -4066 1 796 1094 81 0 0 chr13 27663628 27663777 -92620535 + L1Md_F2 LINE L1 2333 2481 -3402 1 796 250 128 26 0 chr13 27663772 27663811 -92620501 - L1Md_F2 LINE L1 -1171 4712 4673 1 796 6543 77 2 1 chr13 27663812 27664685 -92619627 + L1Md_F2 LINE L1 4712 5585 -298 1 796 7649 68 3 5 chr13 27664686 27665674 -92618638 + L1Md_F2 LINE L1 5587 6572 -10 1 796 321 47 0 0 chr13 27665696 27665739 -92618573 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 1 796 963 200 51 32 chr13 27666690 27666738 -92617574 - URR1A DNA MER1_type -3 223 181 1 796 2909 26 18 0 chr13 27666738 27667078 -92617234 - ORR1A0 LTR MaLR 0 346 1 1 796 963 200 51 32 chr13 27667078 27667246 -92617066 - URR1A DNA MER1_type -46 180 3 1 796 1053 105 17 0 chr13 27669167 27669339 -92614973 + L1_Mus3 LINE L1 6464 6638 0 1 796 4257 68 0 2 chr13 27669358 27669904 -92614408 + L1_Mus1 LINE L1 6023 6567 0 1 796 33 76 0 11 chr13 27670212 27670246 -92614066 + AT_rich Low_complexity Low_complexity 1 34 0 1 796 216 0 0 0 chr13 27670246 27670270 -92614042 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 796 33 76 0 11 chr13 27670270 27670328 -92613984 + AT_rich Low_complexity Low_complexity 1 58 0 1 796 268 333 0 0 chr13 27670778 27670853 -92613459 + C-rich Low_complexity Low_complexity 3 77 0 1 796 457 16 31 0 chr13 27670861 27670869 -92613443 + (TTTC)n Simple_repeat Simple_repeat 4 12 0 1 796 1142 112 0 6 chr13 27670869 27671048 -92613264 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 796 457 16 31 0 chr13 27671048 27671103 -92613209 + (TTTC)n Simple_repeat Simple_repeat 4 59 0 1 796 243 0 0 0 chr13 27671281 27671308 -92613004 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 796 226 26 51 26 chr13 27671762 27671786 -92612526 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 1 796 1027 124 6 6 chr13 27671786 27671964 -92612348 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 796 226 26 51 26 chr13 27671964 27671978 -92612334 + (TTTC)n Simple_repeat Simple_repeat 1 14 0 1 796 279 339 32 76 chr13 27673510 27673695 -92610617 - MER20 DNA MER1_type -6 213 37 1 796 8148 175 12 17 chr13 27674860 27676905 -92607407 - Lx2 LINE L1 -9 6988 4990 1 796 1149 68 0 0 chr13 27676905 27677052 -92607260 - B1_Mus1 SINE Alu 0 148 2 1 796 7069 197 8 49 chr13 27677052 27677662 -92606650 - Lx2 LINE L1 -897 4989 4383 1 796 2472 208 16 11 chr13 27679205 27679750 -92604562 + Lx2 LINE L1 5955 6502 -495 2 796 5348 94 24 25 chr13 27679750 27680560 -92603752 + RLTR13C2 LTR ERVK 1 902 0 2 796 2650 159 30 0 chr13 27680560 27681033 -92603279 + Lx2 LINE L1 6497 6983 -14 2 796 4076 66 2 0 chr13 27681175 27681687 -92602625 - L1_Mus1 LINE L1 -4 6563 6051 2 796 261 273 26 0 chr13 27681941 27682018 -92602294 + (CATA)n Simple_repeat Simple_repeat 4 82 0 2 796 405 0 0 0 chr13 27682231 27682276 -92602036 + (TTAG)n Simple_repeat Simple_repeat 3 47 0 2 796 929 62 94 0 chr13 27682276 27682404 -92601908 - B1_Mus1 SINE Alu -8 140 1 2 796 264 122 0 0 chr13 27682639 27682680 -92601632 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 796 277 293 20 0 chr13 27682689 27682788 -92601524 + (TATATG)n Simple_repeat Simple_repeat 6 106 0 2 796 365 340 69 0 chr13 27682799 27682943 -92601369 - B4A SINE B4 -2 290 137 2 796 1754 116 0 8 chr13 27682949 27683210 -92601102 + L1_Mus2 LINE L1 5991 6249 -317 2 796 383 100 0 0 chr13 27683210 27683270 -92601042 + L1_Mus2 LINE L1 6506 6565 -1 2 796 202 143 0 23 chr13 27683275 27683318 -92600994 + A-rich Low_complexity Low_complexity 1 42 0 2 796 648 149 21 21 chr13 27683657 27683801 -92600511 - L1_Mus4 LINE L1 -7 6629 6486 2 796 198 0 0 0 chr13 27684216 27684238 -92600074 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2 796 5252 143 20 5 chr13 27684238 27685082 -92599230 - Lx LINE L1 -11 6643 5785 2 796 21 71 0 0 chr13 27685114 27685156 -92599156 + AT_rich Low_complexity Low_complexity 1 42 0 2 796 6522 64 20 12 chr13 27685183 27686064 -92598248 - L1Md_F2 LINE L1 0 6582 5695 2 796 3165 67 0 2 chr13 27686064 27686468 -92597844 + L1Md_F2 LINE L1 5290 5692 -191 2 796 11177 170 325 40 chr13 27686440 27687203 -92597109 - L1VL2 LINE L1 -81 5802 5012 2 796 805 108 139 0 chr13 27687203 27687332 -92596980 - B1_Mus2 SINE Alu 0 147 1 2 796 11177 166 260 31 chr13 27687332 27687343 -92596969 - L1VL2 LINE L1 -872 5011 4998 2 796 228 247 134 41 chr13 27687343 27687440 -92596872 - RMER21A LTR ERV1 -462 485 380 2 796 11177 166 260 31 chr13 27687440 27690754 -92593558 - L1VL2 LINE L1 -872 4997 579 2 796 30 27 0 0 chr13 27691384 27691421 -92592891 + AT_rich Low_complexity Low_complexity 1 37 0 2 796 424 283 30 66 chr13 27691936 27692133 -92592179 + L1_Rod LINE L1 3907 4096 -1751 2 796 1750 269 73 44 chr13 27692177 27692583 -92591729 + L1_Rod LINE L1 4486 4912 -935 2 796 622 53 10 10 chr13 27692583 27692679 -92591633 + (TA)n Simple_repeat Simple_repeat 1 96 0 2 796 1750 269 73 44 chr13 27692679 27693009 -92591303 + L1_Rod LINE L1 4913 5248 -599 2 796 495 250 34 27 chr13 27693009 27693157 -92591155 + B1_Mur4 SINE Alu 1 149 -1 2 796 1750 269 73 44 chr13 27693157 27693436 -92590876 + L1_Rod LINE L1 5249 5529 -318 2 796 21 0 0 0 chr13 27696025 27696046 -92588266 + AT_rich Low_complexity Low_complexity 1 21 0 2 796 28 0 0 0 chr13 27696855 27696883 -92587429 + AT_rich Low_complexity Low_complexity 1 28 0 2 796 22 56 0 0 chr13 27697135 27697171 -92587141 + AT_rich Low_complexity Low_complexity 1 36 0 2 796 23 33 0 0 chr13 27699490 27699520 -92584792 + AT_rich Low_complexity Low_complexity 1 30 0 2 796 22 56 0 0 chr13 27700027 27700063 -92584249 + AT_rich Low_complexity Low_complexity 1 36 0 2 796 197 108 27 0 chr13 27700161 27700198 -92584114 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 2 796 252 86 0 0 chr13 27700551 27700586 -92583726 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 796 659 358 19 43 chr13 27701841 27702051 -92582261 - B4 SINE B4 -2 290 86 2 796 277 350 14 20 chr13 27702299 27702445 -92581867 - RMER15 LTR ERVL -104 471 327 2 796 378 0 0 0 chr13 27703628 27703670 -92580642 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 2 796 396 179 0 0 chr13 27704344 27704422 -92579890 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 2 796 6324 161 14 3 chr13 27704824 27706522 -92577790 - Lx LINE L1 -7 6647 4931 2 796 4383 192 15 9 chr13 27706527 27707438 -92576874 + Lx2B LINE L1 2969 3885 -2001 2 796 7313 206 50 105 chr13 27707439 27709455 -92574857 + ORR1A4-int LTR MaLR 59 1963 0 2 796 1303 203 41 71 chr13 27709455 27709794 -92574518 + ORR1A4 LTR MaLR 1 329 0 2 796 2685 266 55 42 chr13 27709794 27710692 -92573620 + Lx6 LINE L1 5664 6572 -888 2 796 24 0 0 0 chr13 27710718 27710742 -92573570 + AT_rich Low_complexity Low_complexity 1 24 0 2 796 3833 59 2 2 chr13 27710881 27711356 -92572956 - MT2C_Mm LTR ERVL 0 475 1 2 796 23 0 0 0 chr13 27711562 27711585 -92572727 + AT_rich Low_complexity Low_complexity 1 23 0 2 796 885 126 0 0 chr13 27711871 27712046 -92572266 + (GA)n Simple_repeat Simple_repeat 1 175 0 2 796 449 116 29 0 chr13 27712283 27712385 -92571927 + Lx2B LINE L1 5044 5179 -961 2 796 210 109 0 59 chr13 27712387 27712455 -92571857 + A-rich Low_complexity Low_complexity 2 65 0 2 796 7109 157 34 2 chr13 27712455 27714019 -92570293 + Lx2B LINE L1 5135 6767 -233 2 796 2228 149 41 30 chr13 27716263 27716657 -92567655 - Lx3C LINE L1 -31 6945 6548 2 796 1418 153 5 0 chr13 27716657 27716879 -92567433 + Lx3C LINE L1 6339 6561 -415 2 796 21 57 0 0 chr13 27717047 27717082 -92567230 + AT_rich Low_complexity Low_complexity 1 35 0 2 796 595 316 73 24 chr13 27717239 27717510 -92566802 + Lx2B LINE L1 7202 7436 -24 2 796 481 297 98 24 chr13 27718763 27719033 -92565279 + RMER20B LTR ERVK 134 425 -91 2 796 9299 55 8 1 chr13 27719416 27721342 -92562970 - L1Md_F2 LINE L1 0 6582 4646 2 796 7844 41 1 2 chr13 27721467 27722427 -92561885 - L1Md_T LINE L1 -2 6580 5645 2 796 264 77 0 0 chr13 27722705 27722744 -92561568 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 796 1625 214 19 30 chr13 27722883 27723254 -92561058 - ORR1B2 LTR MaLR 0 367 1 2 796 294 29 0 0 chr13 27723284 27723319 -92560993 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2 796 259 341 112 43 chr13 27723685 27723961 -92560351 - Lx8 LINE L1 -103 7370 7076 2 796 413 201 30 0 chr13 27724000 27724066 -92560246 + polypyrimidine Low_complexity Low_complexity 73 140 0 2 796 924 101 0 0 chr13 27724066 27724204 -92560108 + (TTC)n Simple_repeat Simple_repeat 3 140 0 2 796 413 201 30 0 chr13 27724204 27724271 -92560041 + polypyrimidine Low_complexity Low_complexity 4 72 0 2 796 326 305 28 28 chr13 27724361 27724506 -92559806 - Lx8 LINE L1 -521 6952 6808 2 796 283 271 28 9 chr13 27724524 27724632 -92559680 - Lx9 LINE L1 -649 6995 6886 2 796 22 56 0 0 chr13 27725183 27725219 -92559093 + AT_rich Low_complexity Low_complexity 1 36 0 2 796 1648 309 47 34 chr13 27725705 27726432 -92557880 + Lx7 LINE L1 6568 7303 -393 2 796 2905 44 11 3 chr13 27726455 27726820 -92557492 - L1Md_F3 LINE L1 0 6584 6217 2 796 204 217 20 61 chr13 27726837 27726935 -92557377 + T-rich Low_complexity Low_complexity 5 98 0 2 796 22 35 0 0 chr13 27727869 27727898 -92556414 + AT_rich Low_complexity Low_complexity 1 29 0 2 796 209 233 13 52 chr13 27732697 27732729 -92551583 + (TATG)n Simple_repeat Simple_repeat 4 36 0 2 796 360 43 0 0 chr13 27732729 27732775 -92551537 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 796 209 233 13 52 chr13 27732775 27732784 -92551528 + (TATG)n Simple_repeat Simple_repeat 4 11 0 2 796 419 0 20 0 chr13 27732784 27732835 -92551477 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 796 209 233 13 52 chr13 27732835 27732869 -92551443 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2 796 5509 119 111 6 chr13 27732874 27733768 -92550544 + Lx LINE L1 5659 6646 -8 2 796 233 170 0 0 chr13 27734273 27734320 -92549992 - RMER15 LTR ERVL -151 424 378 2 796 213 39 0 0 chr13 27734708 27734734 -92549578 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 796 483 217 6 38 chr13 27734734 27734892 -92549420 + (TATG)n Simple_repeat Simple_repeat 4 156 0 2 796 252 77 0 0 chr13 27734964 27735003 -92549309 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 2 796 463 338 26 0 chr13 27735880 27736031 -92548281 + B3A SINE B2 1 155 -43 2 796 486 0 0 0 chr13 27736037 27736091 -92548221 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 796 334 276 155 53 chr13 27736200 27736407 -92547905 - L1_Mur3 LINE L1 -124 5756 5529 2 796 4561 34 2 0 chr13 27736641 27737179 -92547133 + L1Md_T LINE L1 6044 6582 0 2 796 522 0 0 0 chr13 27737426 27737484 -92546828 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 2 796 198 0 0 0 chr13 27737739 27737761 -92546551 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 796 2224 229 40 30 chr13 27737879 27738501 -92545811 - Lx5 LINE L1 -638 6412 5781 2 796 324 0 0 0 chr13 27738559 27738595 -92545717 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2 796 343 207 568 0 chr13 27738595 27738800 -92545512 - Lx4B LINE L1 -21 7037 6717 2 796 1531 158 14 39 chr13 27738803 27739087 -92545225 - Lx5 LINE L1 -87 5790 5514 2 796 333 0 0 0 chr13 27739210 27739247 -92545065 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 796 249 270 99 10 chr13 27739254 27739355 -92544957 - MTE2a LTR MaLR -6 373 264 2 796 236 30 30 0 chr13 27739755 27739788 -92544524 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 796 339 232 183 55 chr13 27740074 27740238 -92544074 + RLTR9A LTR ERVK 11 195 -173 2 796 504 0 0 0 chr13 27740567 27740623 -92543689 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 796 14665 135 76 8 chr13 27740623 27743462 -92540850 + RMER16-int LTR ERVK 262 3291 -2115 2 796 473 179 97 135 chr13 27743447 27743654 -92540658 + RMER16-int LTR ERVK 3502 3700 -1706 2 796 764 317 17 14 chr13 27743749 27744101 -92540211 + RLTR6-int LTR ERV1 7312 7664 -114 2 796 349 279 193 68 chr13 27744461 27744757 -92539555 + RLTR9A LTR ERVK 2 334 -34 2 796 3840 226 49 10 chr13 27744776 27745638 -92538674 + Lx5 LINE L1 6153 7047 -3 2 796 1906 114 3 3 chr13 27745682 27745973 -92538339 + L1_Mus4 LINE L1 6338 6628 -8 2 796 250 269 20 61 chr13 27746786 27746885 -92537427 - MTEa LTR MaLR -6 373 279 2 796 247 246 18 0 chr13 27746981 27747038 -92537274 + GA-rich Low_complexity Low_complexity 2 59 0 2 796 462 308 48 111 chr13 27747352 27747937 -92536375 - L1_Rod LINE L1 -3862 1985 1438 2 796 369 0 0 0 chr13 27748945 27748986 -92535326 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2 796 673 288 144 19 chr13 27749415 27749734 -92534578 - Lx8 LINE L1 -124 7349 6991 2 796 237 33 0 0 chr13 27749734 27749764 -92534548 + (TC)n Simple_repeat Simple_repeat 2 31 0 2 796 881 70 26 0 chr13 27749927 27750083 -92534229 + (TA)n Simple_repeat Simple_repeat 2 161 0 2 796 355 255 10 0 chr13 27750109 27750207 -92534105 - Lx9 LINE L1 -651 6993 6895 2 796 31 26 0 0 chr13 27750821 27750859 -92533453 + AT_rich Low_complexity Low_complexity 1 38 0 2 796 1379 311 106 44 chr13 27751289 27751999 -92532313 + Lx7 LINE L1 6568 7321 -375 2 796 25 75 0 0 chr13 27752195 27752248 -92532064 + AT_rich Low_complexity Low_complexity 1 53 0 3 796 211 172 0 72 chr13 27757254 27757323 -92526989 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 3 796 1549 217 101 11 chr13 27758249 27758393 -92525919 - Lx9 LINE L1 0 7644 7486 3 796 342 0 0 0 chr13 27758393 27758431 -92525881 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 796 1549 217 101 11 chr13 27758431 27758733 -92525579 - Lx9 LINE L1 -159 7485 7158 3 796 1037 109 7 7 chr13 27760543 27760690 -92523622 + B1_Mus1 SINE Alu 1 147 -1 3 796 2045 233 14 27 chr13 27761383 27761824 -92522488 - Lx5 LINE L1 -133 6917 6483 3 796 728 258 167 6 chr13 27762699 27763040 -92521272 - Lx5 LINE L1 -1783 5913 5522 3 796 333 352 18 77 chr13 27763071 27763240 -92521072 + MTEa LTR MaLR 105 263 -116 3 796 387 0 0 0 chr13 27763759 27763802 -92520510 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 796 396 88 0 0 chr13 27763934 27763991 -92520321 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 3 796 3631 115 57 9 chr13 27763994 27764642 -92519670 + L1_Mur2 LINE L1 2224 2902 -2975 3 796 3186 188 24 29 chr13 27764627 27764968 -92519344 - Lx5 LINE L1 -623 5254 4929 3 796 1015 79 65 0 chr13 27764968 27765107 -92519205 + B1_Mus1 SINE Alu 1 148 0 3 796 3186 188 24 29 chr13 27765107 27765487 -92518825 - Lx5 LINE L1 -949 4928 4537 3 796 1377 230 27 60 chr13 27765618 27765951 -92518361 + RMER12 LTR ERVK 1000 1321 -1 3 796 26 64 0 0 chr13 27766042 27766089 -92518223 + AT_rich Low_complexity Low_complexity 1 47 0 3 796 466 307 57 42 chr13 27766244 27766669 -92517643 - L1M2 LINE L1 -1355 4788 4358 3 796 26 64 0 0 chr13 27766814 27766861 -92517451 + AT_rich Low_complexity Low_complexity 1 47 0 3 796 1075 91 0 0 chr13 27766945 27767088 -92517224 + B1_Mus2 SINE Alu 5 147 0 3 796 241 280 65 0 chr13 27767228 27767321 -92516991 - Lx7 LINE L1 -19 7677 7579 3 796 426 20 0 0 chr13 27767369 27767420 -92516892 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 796 1444 244 16 16 chr13 27767543 27767910 -92516402 - Lx7 LINE L1 -376 7320 6954 3 796 579 29 0 0 chr13 27768682 27768751 -92515561 + (GA)n Simple_repeat Simple_repeat 1 69 0 3 796 231 113 57 0 chr13 27768808 27768861 -92515451 + GA-rich Low_complexity Low_complexity 1 56 0 3 796 280 98 16 32 chr13 27768977 27769040 -92515272 + (CAAA)n Simple_repeat Simple_repeat 1 62 0 3 796 573 101 0 0 chr13 27769317 27769396 -92514916 - B1_Mus1 SINE Alu -68 80 2 3 796 1569 139 125 0 chr13 27769782 27770070 -92514242 - IAPEY3_LTR LTR ERVK -8 324 1 3 796 1250 222 55 15 chr13 27770070 27770413 -92513899 - IAP-d-int LTR ERVK 0 6481 6125 3 796 1745 131 48 0 chr13 27770430 27770762 -92513550 - IAPEY3-int LTR ERVK -342 7338 6965 3 796 1418 116 107 0 chr13 27770762 27770987 -92513325 - IAP-d-int LTR ERVK -1287 5255 5007 3 796 292 200 36 0 chr13 27770987 27771042 -92513270 - IAP-d-int LTR ERVK -6039 503 447 3 796 286 250 0 0 chr13 27771059 27771127 -92513185 - RMER16-int LTR ERVK -6015 1566 1499 3 796 279 308 17 8 chr13 27771188 27771306 -92513006 - RMER16-int LTR ERVK -5602 940 822 3 796 1611 198 126 21 chr13 27771482 27771974 -92512338 - RMER16-int LTR ERVK -5474 663 192 3 796 1086 130 29 46 chr13 27772096 27772430 -92511882 - IAPEY3-int LTR ERVK -6629 952 538 3 796 844 145 27 7 chr13 27772428 27772574 -92511738 - IAPEY3-int LTR ERVK -7531 149 1 3 796 1367 142 193 0 chr13 27772577 27772851 -92511461 - IAPEY3_LTR LTR ERVK -5 327 1 3 796 1879 190 83 5 chr13 27774091 27774478 -92509834 + MTC LTR MaLR 5 421 0 3 796 245 128 21 0 chr13 27774591 27774638 -92509674 + (TTTG)n Simple_repeat Simple_repeat 3 50 0 3 796 290 316 13 0 chr13 27774659 27774738 -92509574 + MTD LTR MaLR 20 99 -320 3 796 798 250 43 0 chr13 27774743 27774931 -92509381 + MTD LTR MaLR 224 419 0 3 796 423 0 0 0 chr13 27776675 27776722 -92507590 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 796 7474 108 8 6 chr13 27777161 27778016 -92506296 + Lx3_Mus LINE L1 5070 5916 -1093 3 796 261 0 0 0 chr13 27778016 27778045 -92506267 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 796 7474 99 133 14 chr13 27778045 27778930 -92505382 + Lx3_Mus LINE L1 5917 6922 -87 3 796 189 0 0 0 chr13 27778930 27778951 -92505361 + (GGGTG)n Simple_repeat Simple_repeat 5 25 0 3 796 1118 108 107 10 chr13 27778951 27779029 -92505283 + Lx3_Mus LINE L1 6923 6998 -11 3 796 743 173 0 118 chr13 27779054 27779224 -92505088 - ORR1C2 LTR MaLR -234 150 1 3 796 923 169 0 6 chr13 27779900 27780078 -92504234 - Lx LINE L1 -4 6650 6474 3 796 951 90 0 0 chr13 27780080 27780224 -92504088 - MusHAL1 LINE L1 -1733 979 836 3 796 43 56 0 0 chr13 27780422 27780493 -92503819 + AT_rich Low_complexity Low_complexity 1 71 0 3 796 2559 108 28 2 chr13 27781542 27781940 -92502372 - Lx LINE L1 -4 6650 6243 3 796 384 179 0 0 chr13 27783832 27783910 -92500402 + (TA)n Simple_repeat Simple_repeat 1 78 0 3 796 659 282 15 0 chr13 27784046 27784177 -92500135 + B1_Mur1 SINE Alu 6 138 -11 3 796 705 132 9 0 chr13 27784222 27784328 -92499984 + B2_Mm1t SINE B2 2 108 -85 3 99 26077 99 13 10 chr13 27785662 27790415 -92493897 + L1Md_F2 LINE L1 86 4852 -1031 3 797 2983 83 96 40 chr13 27790415 27790865 -92493447 + MT2C_Mm LTR ERVL 1 475 0 3 797 3950 72 2 19 chr13 27790865 27791402 -92492910 + MERVL-int LTR ERVL 1 528 -4957 3 797 27378 48 9 1 chr13 27791387 27794709 -92489603 + MERVL-int LTR ERVL 2008 5356 -129 3 797 338 153 26 53 chr13 27794830 27794906 -92489406 + ORR1A3-int LTR MaLR 567 640 -1323 3 797 301 26 0 0 chr13 27794906 27794944 -92489368 + MERVL-int LTR ERVL 5448 5485 0 3 797 380 41 78 0 chr13 27794944 27795002 -92489310 + MT2C_Mm LTR ERVL 1 62 -471 3 797 1390 73 6 0 chr13 27795002 27795181 -92489131 + L1Md_F2 LINE L1 5407 5586 -297 3 797 7571 71 1 12 chr13 27795182 27796175 -92488137 + L1Md_F2 LINE L1 5588 6569 -13 3 797 1146 81 0 0 chr13 27796347 27796495 -92487817 + B1_Mus1 SINE Alu 1 148 0 3 797 1967 239 53 18 chr13 27797425 27797935 -92486377 + RLTR11A LTR ERVK 1 528 0 3 797 2750 147 12 24 chr13 27798091 27798592 -92485720 - RLTR13D2 LTR ERVK 0 1023 529 3 797 789 122 0 0 chr13 27798587 27798694 -92485618 - RLTR13D2 LTR ERVK -926 107 1 3 797 4006 274 84 20 chr13 27799401 27800532 -92483780 + Lx6 LINE L1 6253 7456 -4 3 797 537 92 0 0 chr13 27801433 27801509 -92482803 + (TA)n Simple_repeat Simple_repeat 1 76 0 3 797 225 0 0 0 chr13 27801510 27801535 -92482777 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 797 213 146 0 0 chr13 27802350 27802398 -92481914 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 3 797 23 0 0 0 chr13 27802592 27802615 -92481697 + AT_rich Low_complexity Low_complexity 1 23 0 3 797 367 266 125 12 chr13 27805616 27805776 -92478536 - L1M3 LINE L1 -1980 4160 3983 3 797 474 73 12 47 chr13 27805787 27805873 -92478439 - L1Md_F2 LINE L1 0 6582 6500 3 797 1115 102 0 0 chr13 27805880 27806027 -92478285 + B1_Mus2 SINE Alu 1 147 0 3 797 24 0 0 0 chr13 27806027 27806051 -92478261 + AT_rich Low_complexity Low_complexity 1 24 0 3 797 387 0 0 0 chr13 27806051 27806094 -92478218 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 3 797 6024 124 17 13 chr13 27806974 27807927 -92476385 + Lx3_Mus LINE L1 6030 6986 -23 3 797 252 0 0 0 chr13 27807929 27807957 -92476355 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 797 224 40 59 20 chr13 27807972 27808023 -92476289 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 3 797 243 196 20 0 chr13 27810059 27810110 -92474202 + MTEa LTR MaLR 6 57 -322 3 797 987 353 72 8 chr13 27810657 27811156 -92473156 + MTE-int LTR MaLR 826 1356 -14 3 797 461 344 119 31 chr13 27811253 27811514 -92472798 + MTEa LTR MaLR 41 324 -55 3 797 1308 133 59 49 chr13 27811741 27812027 -92472285 - Lx LINE L1 0 6654 6345 3 797 366 94 47 0 chr13 27812027 27812091 -92472221 + L1Md_F2 LINE L1 6514 6580 -2 3 797 5842 212 29 67 chr13 27812143 27812584 -92471728 + Lx4A LINE L1 2199 2620 -3257 3 797 329 43 0 21 chr13 27812584 27812632 -92471680 + (TAA)n Simple_repeat Simple_repeat 2 48 0 3 797 5842 212 29 67 chr13 27812632 27813193 -92471119 + Lx4A LINE L1 2621 3183 -2694 3 797 2827 97 48 10 chr13 27813193 27813608 -92470704 + Lx3A LINE L1 6540 6970 -11 3 797 5842 212 29 67 chr13 27813608 27814270 -92470042 + Lx4A LINE L1 3184 3802 -2075 3 797 2691 189 61 47 chr13 27814270 27814996 -92469316 + Lx4A LINE L1 5203 5965 -1093 3 797 232 259 35 0 chr13 27815409 27815494 -92468818 + Lx4A LINE L1 5988 6075 -1385 3 797 4208 175 55 35 chr13 27815518 27815897 -92468415 - RLTR25A LTR ERVK -219 884 508 3 797 242 29 29 0 chr13 27815897 27815932 -92468380 + (CAAA)n Simple_repeat Simple_repeat 3 38 0 3 797 4208 175 55 35 chr13 27815932 27816411 -92467901 - RLTR25A LTR ERVK -596 507 9 3 797 595 316 30 13 chr13 27816424 27816662 -92467650 + Lx4A LINE L1 6074 6343 -707 3 797 294 286 112 0 chr13 27816662 27816760 -92467552 + Lx4A LINE L1 6794 6902 -558 3 797 1994 145 38 107 chr13 27816809 27817257 -92467055 - RLTR23 LTR ERV1 -3 427 11 3 797 1196 317 42 17 chr13 27817272 27817680 -92466632 + Lx4A LINE L1 7019 7436 -24 3 797 535 161 19 4 chr13 27817720 27817833 -92466479 + L1_Mur3 LINE L1 2894 3039 -3104 3 797 4157 194 20 28 chr13 27817844 27819086 -92465226 - L1_Mm LINE L1 -1507 4636 3481 3 797 189 0 0 0 chr13 27819086 27819107 -92465205 + (TTG)n Simple_repeat Simple_repeat 1 21 0 3 797 3764 171 26 4 chr13 27819107 27819513 -92464799 - L1_Mm LINE L1 -2640 3503 3076 3 797 391 188 0 0 chr13 27821281 27821345 -92462967 + 5S rRNA rRNA 27 90 -31 3 797 350 269 44 44 chr13 27821284 27821397 -92462915 + AmnSINE1 SINE SINE 27 139 -436 3 797 383 308 136 39 chr13 27821920 27822126 -92462186 - MTE2b LTR MaLR -37 342 117 3 797 1413 238 165 74 chr13 27822130 27822657 -92461655 - RMER19C LTR ERVK 0 611 37 3 797 870 261 29 29 chr13 27822683 27822995 -92461317 + Lx8 LINE L1 5476 5787 -60 3 797 1578 325 60 33 chr13 27823243 27824124 -92460188 + Lx8 LINE L1 6109 7013 -460 3 797 3419 68 2 24 chr13 27825386 27825851 -92458461 + L1_Mus1 LINE L1 6113 6567 0 3 797 288 345 48 18 chr13 27826834 27827002 -92457310 + RMER15 LTR ERVL 360 532 -43 3 797 23 33 0 0 chr13 27827057 27827087 -92457225 + AT_rich Low_complexity Low_complexity 1 30 0 3 797 457 217 570 0 chr13 27827287 27827480 -92456832 + L1_Mur3 LINE L1 3506 3802 -2078 3 797 1285 289 102 3 chr13 27827585 27827966 -92456346 + MTD LTR MaLR 1 419 0 3 797 266 88 0 0 chr13 27828178 27828212 -92456100 - L1_Mus1 LINE L1 -156 6411 6378 3 797 1599 121 0 11 chr13 27828212 27828472 -92455840 - L1Md_F2 LINE L1 0 6582 6326 3 797 703 114 60 22 chr13 27829066 27829200 -92455112 - RMER19C LTR ERVK -472 139 1 3 797 246 335 71 17 chr13 27829211 27829451 -92454861 - L1M3 LINE L1 -2022 4118 3866 3 797 574 286 81 10 chr13 27829774 27829972 -92454340 - B3 SINE B2 -3 213 2 3 797 1803 199 28 16 chr13 27830097 27830484 -92453828 + ORR1B1 LTR MaLR 2 393 -1 3 797 232 257 61 44 chr13 27830760 27830874 -92453438 - L1_Mur2 LINE L1 -2009 3868 3753 3 797 1938 257 29 36 chr13 27831084 27831701 -92452611 - Lx7 LINE L1 -11 7685 7073 3 797 320 320 32 106 chr13 27831782 27832065 -92452247 - Lx9 LINE L1 -418 7226 6965 3 797 28079 133 17 7 chr13 27832129 27838263 -92446049 + L1_Mus1 LINE L1 364 6565 -2 3 797 333 0 0 0 chr13 27838315 27838352 -92445960 + (CAA)n Simple_repeat Simple_repeat 3 39 0 3 797 1322 61 29 17 chr13 27838770 27839299 -92445013 + (TATATG)n Simple_repeat Simple_repeat 1 535 0 3 797 2570 80 87 8 chr13 27839328 27839695 -92444617 - MTA_Mm LTR MaLR 0 396 1 3 797 21481 162 49 16 chr13 27839810 27845872 -92438440 + Lx LINE L1 395 6650 -4 3 797 258 206 0 0 chr13 27846284 27846347 -92437965 + CT-rich Low_complexity Low_complexity 1 63 0 3 797 72 67 0 0 chr13 27846629 27846764 -92437548 + AT_rich Low_complexity Low_complexity 1 135 0 3 797 8885 116 40 3 chr13 27846775 27847826 -92436486 - Lx3_Mus LINE L1 -4 7005 5908 3 797 396 0 0 0 chr13 27847826 27847870 -92436442 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 797 12751 99 12 5 chr13 27847870 27849799 -92434513 - Lx3_Mus LINE L1 -1102 5907 3969 3 797 659 144 0 0 chr13 27849979 27850083 -92434229 - Lx2A1 LINE L1 -546 6462 6359 4 797 3723 126 16 3 chr13 27850084 27850656 -92433656 + Lx2A1 LINE L1 6430 7008 0 4 797 894 86 23 0 chr13 27850817 27850945 -92433367 - L1_Mm LINE L1 -1314 4569 4439 4 797 546 278 127 66 chr13 27850947 27851294 -92433018 + RLTR9A LTR ERVK 1 368 0 4 797 492 18 0 0 chr13 27851718 27851775 -92432537 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 797 5010 186 91 64 chr13 27851775 27853403 -92430909 + RMER16-int LTR ERVK 267 2563 -4843 4 797 1616 173 20 7 chr13 27853596 27853898 -92430414 + RMER16-int LTR ERVK 1566 1871 -3535 4 797 3110 52 0 0 chr13 27853916 27854302 -92430010 - L1Md_F2 LINE L1 -13 6569 6184 4 797 2384 14 4 0 chr13 27854302 27854577 -92429735 + L1Md_F2 LINE L1 5654 5929 -653 4 797 14583 124 35 19 chr13 27854578 27855570 -92428742 + RMER16-int LTR ERVK 1858 2863 -2543 4 797 431 18 0 18 chr13 27855570 27855627 -92428685 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 797 14583 124 35 19 chr13 27855627 27857076 -92427236 + RMER16-int LTR ERVK 2864 4337 -1069 4 797 709 310 11 7 chr13 27857071 27857347 -92426965 + RLTR6-int LTR ERV1 7387 7663 -115 4 797 252 246 93 100 chr13 27857464 27857604 -92426708 + RMER16-int LTR ERVK 5241 5379 -27 4 797 479 293 191 38 chr13 27857699 27858018 -92426294 + RLTR9A LTR ERVK 1 368 0 4 797 11524 185 25 13 chr13 27858018 27860406 -92423906 - L1_Mur1 LINE L1 -1441 4445 2029 4 797 6694 167 9 21 chr13 27860421 27862513 -92421799 + Lx LINE L1 4569 6648 -6 4 797 772 238 34 7 chr13 27862512 27862706 -92421606 - Lx6 LINE L1 -332 7128 6950 4 797 683 60 80 13 chr13 27863555 27863706 -92420606 + (TCTCTG)n Simple_repeat Simple_repeat 1 161 0 4 797 939 117 0 0 chr13 27863706 27863886 -92420426 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 797 21 0 0 0 chr13 27867281 27867302 -92417010 + AT_rich Low_complexity Low_complexity 1 21 0 4 797 198 0 0 0 chr13 27867744 27867766 -92416546 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 4 797 35 24 0 0 chr13 27867789 27867831 -92416481 + AT_rich Low_complexity Low_complexity 1 42 0 4 797 27 0 0 0 chr13 27868476 27868503 -92415809 + AT_rich Low_complexity Low_complexity 1 27 0 4 797 34 111 0 0 chr13 27868710 27868863 -92415449 + AT_rich Low_complexity Low_complexity 1 153 0 4 797 843 207 0 0 chr13 27868975 27869120 -92415192 + B1_Mur4 SINE Alu 1 145 -5 4 797 663 13 0 0 chr13 27869592 27869668 -92414644 + (TTTCC)n Simple_repeat Simple_repeat 5 80 0 4 797 215 150 25 0 chr13 27869669 27869709 -92414603 + CT-rich Low_complexity Low_complexity 3 43 0 4 797 202 217 0 0 chr13 27869865 27869911 -92414401 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 797 256 258 134 55 chr13 27871366 27871530 -92412782 - MIRc SINE MIR -1 267 91 4 797 297 289 69 17 chr13 27872548 27872664 -92411648 - RMER15 LTR ERVL -126 449 328 4 797 245 360 29 7 chr13 27873271 27873408 -92410904 - Lx8 LINE L1 -757 6716 6577 4 797 596 306 14 56 chr13 27874439 27874646 -92409666 - B3A SINE B2 0 216 7 4 797 2489 298 79 30 chr13 27874718 27876481 -92407831 - Lx9 LINE L1 -7 7637 5653 4 797 629 279 167 47 chr13 27876953 27877318 -92406994 - Lx8 LINE L1 -9 7464 7056 4 797 229 322 63 44 chr13 27877355 27877514 -92406798 - RLTR3_Mm LTR ERVK -721 607 446 4 797 623 338 26 19 chr13 27877554 27877862 -92406450 - Lx8 LINE L1 -682 6791 6482 4 797 29783 11 2 0 chr13 27878679 27882794 -92401518 - L1Md_A LINE L1 0 6582 2461 4 797 2175 103 9 3 chr13 27882922 27883242 -92401070 + L1_Mus2 LINE L1 6245 6566 0 4 797 2101 249 108 27 chr13 27884639 27884754 -92399558 - Lx9 LINE L1 -7 7637 7528 4 797 453 19 0 0 chr13 27884754 27884808 -92399504 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 797 2101 249 108 27 chr13 27884808 27885360 -92398952 - Lx9 LINE L1 -117 7527 6917 4 797 777 318 96 35 chr13 27885879 27886368 -92397944 - Lx9 LINE L1 -77 7567 7049 4 797 631 338 38 4 chr13 27886582 27886820 -92397492 - Lx9 LINE L1 -983 6661 6416 4 797 4216 128 15 8 chr13 27886859 27887518 -92396794 + Lx2A1 LINE L1 6343 7006 -2 4 797 477 50 0 0 chr13 27888157 27888217 -92396095 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 4 797 8863 94 5 10 chr13 27888644 27890723 -92393589 + L1_Mus1 LINE L1 4502 6565 -2 4 797 585 333 43 19 chr13 27891098 27891355 -92392957 - MTE2b LTR MaLR -109 270 8 4 797 347 347 63 24 chr13 27891363 27891570 -92392742 - MTE2b-int LTR MaLR -2 1578 1364 4 797 380 328 40 8 chr13 27891660 27891786 -92392526 - MTE2b-int LTR MaLR -454 1126 997 4 797 180 357 60 0 chr13 27893384 27893468 -92390844 + MIRm SINE MIR 14 102 -174 4 797 342 353 13 13 chr13 27893544 27893696 -92390616 + RMER15 LTR ERVL 351 502 -73 4 797 227 364 61 66 chr13 27894030 27894227 -92390085 + MER20 DNA MER1_type 1 196 -23 4 797 26 30 0 0 chr13 27894646 27894679 -92389633 + AT_rich Low_complexity Low_complexity 1 33 0 4 797 754 284 42 0 chr13 27895235 27895425 -92388887 + B3 SINE B2 18 215 -1 4 797 6916 106 22 2 chr13 27895770 27896782 -92387530 - Lx3_Mus LINE L1 -5 7004 5973 4 797 21 71 0 0 chr13 27900717 27900759 -92383553 + AT_rich Low_complexity Low_complexity 1 42 0 4 797 2604 186 42 2 chr13 27900944 27901423 -92382889 - Lx4B LINE L1 -384 6674 6177 4 797 1344 294 31 15 chr13 27901532 27901988 -92382324 - Lx8 LINE L1 -234 7239 6777 4 797 616 218 68 40 chr13 27901988 27902165 -92382147 + B2_Mm2 SINE B2 5 186 -9 4 797 2173 318 106 25 chr13 27902417 27903547 -92380765 - Lx8 LINE L1 -84 7389 6168 4 797 262 242 50 50 chr13 27903719 27903819 -92380493 - Lx8 LINE L1 -1540 5933 5834 4 797 800 259 15 42 chr13 27903844 27904106 -92380206 + Lx7 LINE L1 5589 5843 -1853 4 797 857 303 78 7 chr13 27904415 27904711 -92379601 + Lx8 LINE L1 6314 6630 -843 4 797 257 286 44 18 chr13 27905216 27905330 -92378982 - Lx8 LINE L1 -17 5830 5714 4 797 243 0 0 0 chr13 27905353 27905380 -92378932 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 797 424 287 46 41 chr13 27905393 27905589 -92378723 - Lx9 LINE L1 -1623 6021 5825 4 797 230 336 46 62 chr13 27905920 27906050 -92378262 + MTD LTR MaLR 279 406 -13 4 797 22 35 0 0 chr13 27906282 27906311 -92378001 + AT_rich Low_complexity Low_complexity 1 29 0 4 797 3433 286 58 44 chr13 27906436 27908196 -92376116 + L1_Rod LINE L1 3775 5558 -289 4 797 1948 197 142 7 chr13 27908196 27908661 -92375651 - RLTR11A LTR ERVK 0 528 1 4 797 449 266 60 38 chr13 27908661 27908794 -92375518 + L1_Rod LINE L1 5553 5688 -159 4 797 410 367 15 25 chr13 27908800 27909004 -92375308 + Lx9 LINE L1 7058 7259 -385 4 797 322 266 21 0 chr13 27909089 27909183 -92375129 + Lx6 LINE L1 6763 6858 -602 4 797 1082 60 15 0 chr13 27910002 27910136 -92374176 + B1_Mm SINE Alu 3 138 -9 4 797 243 0 0 0 chr13 27910136 27910163 -92374149 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 797 26 30 0 0 chr13 27910255 27910288 -92374024 + AT_rich Low_complexity Low_complexity 1 33 0 4 797 326 169 15 0 chr13 27910294 27910359 -92373953 - Lx3C LINE L1 -2 6974 6909 4 797 434 271 34 60 chr13 27910662 27910811 -92373501 + Lx7 LINE L1 7552 7696 0 4 797 3632 227 24 10 chr13 27911013 27911779 -92372533 + Lx5 LINE L1 6262 7037 -13 4 797 7550 149 31 11 chr13 27911775 27913039 -92371273 + Lx3B LINE L1 5684 6972 -1 4 797 7116 235 36 21 chr13 27913092 27913157 -92371155 - Lx7 LINE L1 -295 7401 7354 4 797 1042 125 11 0 chr13 27913157 27913333 -92370979 + (TA)n Simple_repeat Simple_repeat 1 178 0 4 797 7116 235 36 21 chr13 27913333 27915055 -92369257 - Lx7 LINE L1 -343 7353 5587 4 797 484 250 0 79 chr13 27915078 27915217 -92369095 + ORR1D1 LTR MaLR 247 374 0 4 797 567 0 0 0 chr13 27915846 27915909 -92368403 + (ATATG)n Simple_repeat Simple_repeat 4 66 0 4 797 321 26 0 0 chr13 27915972 27916010 -92368302 + (T)n Simple_repeat Simple_repeat 1 38 0 4 99 40783 18 8 6 chr13 27916010 27922586 -92361726 - L1Md_A LINE L1 -91 6491 66 4 798 5875 103 6 5 chr13 27922594 27923439 -92360873 + L1Md_F2 LINE L1 5725 6570 -12 4 798 299 327 51 32 chr13 27923445 27923603 -92360709 + MTEb LTR MaLR 123 283 -96 4 798 1066 293 29 165 chr13 27924420 27924858 -92359454 - L1_Rod LINE L1 -3277 2570 2210 4 798 1055 139 0 6 chr13 27924858 27925039 -92359273 + (GA)n Simple_repeat Simple_repeat 1 180 0 4 798 1066 293 29 165 chr13 27925039 27925681 -92358631 - L1_Rod LINE L1 -3638 2209 1637 4 798 5186 137 18 6 chr13 27926308 27927141 -92357171 + Lx2 LINE L1 5800 6642 -355 4 798 1151 151 5 19 chr13 27927145 27927355 -92356957 + Lx2 LINE L1 6778 6984 -13 4 798 4289 122 28 1 chr13 27927382 27928058 -92356254 + Lx3_Mus LINE L1 6305 6998 -11 4 798 3073 304 52 32 chr13 27928887 27930043 -92354269 + Lx7 LINE L1 6130 7317 -379 4 798 480 77 0 0 chr13 27930043 27930108 -92354204 + (CTG)n Simple_repeat Simple_repeat 1 65 0 4 798 3073 304 52 32 chr13 27930108 27930157 -92354155 + Lx7 LINE L1 7318 7359 -337 4 798 220 189 13 13 chr13 27930251 27930326 -92353986 + GA-rich Low_complexity Low_complexity 3 77 0 4 798 376 278 411 20 chr13 27931282 27931487 -92352825 - MTEa LTR MaLR -14 405 121 4 798 1839 334 63 29 chr13 27931518 27932790 -92351522 + Lx8 LINE L1 5490 6848 -625 4 798 423 301 109 0 chr13 27932829 27932985 -92351327 + Lx8 LINE L1 7047 7219 -254 4 798 324 311 0 24 chr13 27932999 27933124 -92351188 + Lx8 LINE L1 7350 7471 -2 4 798 24 0 0 0 chr13 27933278 27933302 -92351010 + AT_rich Low_complexity Low_complexity 1 24 0 4 798 234 0 0 0 chr13 27933426 27933452 -92350860 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 798 410 287 20 0 chr13 27933486 27933587 -92350725 + Lx9 LINE L1 7091 7193 -451 4 798 5885 236 59 11 chr13 27934352 27935790 -92348522 - Lx7 LINE L1 -17 7679 6188 4 798 387 0 0 0 chr13 27935790 27935833 -92348479 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 798 5885 236 59 11 chr13 27935833 27935878 -92348434 - Lx7 LINE L1 -1509 6187 6126 4 798 23 0 0 0 chr13 27936235 27936258 -92348054 + AT_rich Low_complexity Low_complexity 1 23 0 4 798 7750 65 16 0 chr13 27936921 27938173 -92346139 - L1_Mus1 LINE L1 -1 6566 5301 4 798 373 382 58 4 chr13 27939713 27939939 -92344373 - MTEa LTR MaLR -122 257 20 4 798 26 0 0 0 chr13 27940208 27940234 -92344078 + AT_rich Low_complexity Low_complexity 1 26 0 4 798 332 365 36 23 chr13 27941224 27941443 -92342869 + RMER15 LTR ERVL 336 557 -18 4 798 456 305 106 22 chr13 27941920 27942232 -92342080 + Lx8 LINE L1 7102 7439 -34 4 798 195 42 0 0 chr13 27942406 27942430 -92341882 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 798 240 319 16 96 chr13 27942916 27943041 -92341271 + B2_Mm2 SINE B2 32 146 -49 4 798 222 62 0 0 chr13 27943390 27943422 -92340890 + (CCAA)n Simple_repeat Simple_repeat 1 32 0 4 798 392 0 21 0 chr13 27944031 27944079 -92340233 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 4 798 339 176 22 11 chr13 27944109 27944201 -92340111 + (TA)n Simple_repeat Simple_repeat 1 93 0 5 798 381 43 0 0 chr13 27944201 27944248 -92340064 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 798 4785 255 53 31 chr13 27944248 27945575 -92338737 - Lx6 LINE L1 -54 7406 6050 5 798 23 54 0 0 chr13 27946030 27946067 -92338245 + AT_rich Low_complexity Low_complexity 1 37 0 5 798 297 250 52 0 chr13 27946482 27946578 -92337734 + Lx9 LINE L1 7354 7454 -190 5 798 333 0 0 0 chr13 27946614 27946651 -92337661 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 798 709 199 14 0 chr13 27946686 27946827 -92337485 + B1_Mus1 SINE Alu 4 146 -2 5 798 21 0 0 0 chr13 27946946 27946967 -92337345 + AT_rich Low_complexity Low_complexity 1 21 0 5 798 188 61 0 57 chr13 27948592 27948627 -92335685 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 5 798 1017 90 7 14 chr13 27949861 27949993 -92334319 + B1_Mm SINE Alu 3 134 -13 5 798 326 23 23 0 chr13 27949993 27950036 -92334276 + (CAAAA)n Simple_repeat Simple_repeat 1 44 0 5 798 1017 90 7 14 chr13 27950036 27950049 -92334263 + B1_Mm SINE Alu 135 147 0 5 798 15187 149 30 10 chr13 27950473 27955298 -92329014 - L1VL4 LINE L1 -59 5821 560 5 798 2637 81 64 8 chr13 27955392 27955767 -92328545 + MTA_Mm LTR MaLR 1 396 0 5 798 960 135 0 7 chr13 27956206 27956348 -92327964 + B1_Mus1 SINE Alu 1 141 -7 5 798 473 146 22 0 chr13 27956353 27956442 -92327870 + GA-rich Low_complexity Low_complexity 2 92 0 5 798 408 259 104 65 chr13 27957307 27957567 -92326745 + L1Md_F2 LINE L1 818 1087 -6641 5 798 494 195 68 49 chr13 27957573 27957685 -92326627 + L1Md_F2 LINE L1 1355 1477 -4403 5 798 820 61 0 0 chr13 27957685 27957828 -92326484 + L1_Mus1 LINE L1 6448 6567 0 5 798 494 195 68 49 chr13 27957828 27957856 -92326456 + L1Md_F2 LINE L1 1478 1504 -4376 5 798 1036 164 16 0 chr13 27957856 27958039 -92326273 + B2_Mm2 SINE B2 1 186 -9 5 798 494 195 68 49 chr13 27958039 27958058 -92326254 + L1Md_F2 LINE L1 1505 1518 -4362 5 798 204 182 0 0 chr13 27958059 27958103 -92326209 + GA-rich Low_complexity Low_complexity 2 45 0 5 798 1249 233 160 112 chr13 27958106 27958849 -92325463 + L1Md_F2 LINE L1 1491 2269 -3611 5 798 8040 200 33 85 chr13 27958847 27959779 -92324533 + L1Md_F2 LINE L1 3750 4706 -1174 5 798 3209 56 5 0 chr13 27959779 27960190 -92324122 + L1Md_F2 LINE L1 6158 6570 -12 5 798 8040 163 25 63 chr13 27960190 27961629 -92322683 + L1Md_F2 LINE L1 4707 6009 -573 5 798 1390 106 0 18 chr13 27961629 27961849 -92322463 + L1Md_F2 LINE L1 6363 6578 -4 5 798 4160 70 7 29 chr13 27961849 27962439 -92321873 + L1Md_F2 LINE L1 6005 6581 -1 5 798 857 199 10 10 chr13 27962442 27962640 -92321672 + Lx6 LINE L1 5725 5922 -1538 5 798 6626 79 45 28 chr13 27962640 27963201 -92321111 - RLTR13D5 LTR ERVK 0 1023 422 5 798 1130 50 0 0 chr13 27963201 27963342 -92320970 + B1_Mm SINE Alu 1 141 -6 5 798 363 73 0 0 chr13 27963344 27963399 -92320913 + (CAAG)n Simple_repeat Simple_repeat 2 56 0 5 798 6626 79 45 28 chr13 27963399 27963789 -92320523 - RLTR13D5 LTR ERVK -602 421 53 5 798 1250 312 15 28 chr13 27963819 27964336 -92319976 + Lx6 LINE L1 6073 6812 -648 5 798 831 112 18 36 chr13 27964336 27964502 -92319810 + L1_Mus3 LINE L1 6476 6638 0 5 798 1103 95 0 13 chr13 27964504 27964654 -92319658 + B1_Mus1 SINE Alu 1 148 0 5 798 297 0 0 0 chr13 27964658 27964691 -92319621 + (CATA)n Simple_repeat Simple_repeat 4 36 0 5 798 380 38 0 36 chr13 27964691 27964745 -92319567 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 5 798 1667 284 141 25 chr13 27964745 27965305 -92319007 + Lx6 LINE L1 6813 7433 -27 5 798 462 18 0 0 chr13 27965389 27965444 -92318868 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 798 762 265 141 68 chr13 27965451 27965949 -92318363 + L1_Rod LINE L1 588 1121 -6487 5 798 429 235 20 0 chr13 27965955 27966057 -92318255 + U6 snRNA snRNA 4 107 0 5 798 3869 254 71 21 chr13 27966057 27966166 -92318146 + L1_Rod LINE L1 1403 1506 -4341 5 798 810 203 28 22 chr13 27966166 27966347 -92317965 + B2_Mm2 SINE B2 1 182 -13 5 798 3869 254 71 21 chr13 27966347 27966699 -92317613 + L1_Rod LINE L1 1507 1877 -3970 5 798 637 12 24 0 chr13 27966699 27966781 -92317531 + (TG)n Simple_repeat Simple_repeat 1 84 0 5 798 3869 254 71 21 chr13 27966781 27967691 -92316621 + L1_Rod LINE L1 1878 2842 -3005 5 798 39170 35 2 6 chr13 27967704 27974086 -92310226 - L1Md_A LINE L1 0 6582 232 5 798 665 276 112 34 chr13 27974138 27974610 -92309702 + L1_Rod LINE L1 2989 3497 -2350 5 798 1240 221 79 0 chr13 27974616 27974883 -92309429 - MTC LTR MaLR -44 377 90 5 798 35237 64 15 7 chr13 27974883 27980161 -92304151 + L1Md_F LINE L1 322 5586 -297 5 798 8398 36 0 0 chr13 27980161 27981157 -92303155 + L1Md_T LINE L1 5587 6582 0 5 798 35237 52 8 3 chr13 27981157 27981311 -92303001 + L1Md_F LINE L1 5587 5759 -124 5 798 618 152 0 59 chr13 27981312 27981431 -92302881 + B2_Mm2 SINE B2 82 193 -2 5 798 290 29 0 0 chr13 27981433 27981467 -92302845 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 5 798 816 204 0 0 chr13 27981467 27981643 -92302669 + GA-rich Low_complexity Low_complexity 3 178 0 5 798 180 0 0 0 chr13 27981645 27981665 -92302647 + (GGAA)n Simple_repeat Simple_repeat 2 21 0 5 798 765 106 35 0 chr13 27981738 27981851 -92302461 - MTC LTR MaLR -300 121 5 5 798 4926 156 6 12 chr13 27982241 27983103 -92301209 + L1_Mm LINE L1 5027 5883 0 5 798 2808 193 37 2 chr13 27983128 27983663 -92300649 + Lx LINE L1 6099 6652 -2 5 798 507 302 133 5 chr13 27984383 27984586 -92299726 + MTE-int LTR MaLR 801 1029 -551 5 798 293 260 38 9 chr13 27984610 27984741 -92299571 - L1M2 LINE L1 -2421 3725 3587 5 798 1374 322 86 6 chr13 27985567 27986267 -92298045 + Lx8 LINE L1 6593 7436 -208 5 798 29 28 0 0 chr13 27986379 27986415 -92297897 + AT_rich Low_complexity Low_complexity 1 36 0 5 798 20788 103 30 8 chr13 27986472 27990418 -92293894 + L1_Mur1 LINE L1 458 4489 -1397 5 798 4640 158 139 1 chr13 27990417 27991323 -92292989 + L1Md_F LINE L1 107 1137 -5382 5 798 8062 117 56 14 chr13 27991291 27991349 -92292963 + MusHAL1 LINE L1 1 55 -2657 5 798 3641 61 2 4 chr13 27991349 27991825 -92292487 + L1Md_F2 LINE L1 6108 6582 0 5 798 8062 117 56 14 chr13 27991825 27993190 -92291122 + MusHAL1 LINE L1 56 1484 -1228 5 798 6454 103 7 3 chr13 27993189 27994393 -92289919 - L1VL1 LINE L1 -2294 1404 193 5 798 672 102 0 0 chr13 27994460 27994558 -92289754 + (TTC)n Simple_repeat Simple_repeat 2 99 0 5 798 1053 109 0 0 chr13 27994560 27994707 -92289605 - B1_Mus1 SINE Alu 0 148 2 5 798 1457 173 104 96 chr13 27995426 27995866 -92288446 + RMER1C Other Other 897 1340 -2 5 798 693 332 103 24 chr13 27996435 27996774 -92287538 - MTEa LTR MaLR -13 366 1 5 798 1763 303 89 28 chr13 27996782 27997501 -92286811 - MTEa-int LTR MaLR -8 1572 810 5 798 518 88 25 0 chr13 27997822 27997902 -92286410 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 5 798 244 325 61 71 chr13 27999618 27999830 -92284482 + MER20 DNA MER1_type 4 213 -6 5 798 592 272 6 0 chr13 27999831 28000000 -92284312 - L1_Mur3 LINE L1 -3222 2658 2489 5 798 1000 295 38 0 chr13 28000016 28000413 -92283899 - L1_Mur3 LINE L1 -3408 2472 2061 1 798 12246 73 8 4 chr13 28000449 28002786 -92281526 - L1Md_F2 LINE L1 -14 6568 4222 2 798 4361 38 0 0 chr13 28002786 28003308 -92281004 + L1Md_T LINE L1 6060 6581 -1 3 798 12492 97 22 2 chr13 28003308 28005849 -92278463 - L1Md_F2 LINE L1 -2924 2959 368 2 798 1473 261 108 29 chr13 28005859 28006455 -92277857 - L1_Mur3 LINE L1 -3850 2030 1369 1 798 2443 130 100 2 chr13 28006455 28006864 -92277448 + RLTR44B LTR ERVK 1 449 0 4 798 1473 307 77 46 chr13 28006864 28007190 -92277122 - L1_Mur3 LINE L1 -4466 1381 1047 1 798 670 254 51 17 chr13 28008151 28008382 -92275930 + Lx4B LINE L1 6560 6742 -316 5 798 375 193 106 22 chr13 28008373 28008504 -92275808 + Lx4B LINE L1 6869 7050 -8 5 798 368 290 58 0 chr13 28009044 28009182 -92275130 - L1_Mur3 LINE L1 -845 5035 4890 6 798 880 263 55 14 chr13 28009153 28009487 -92274825 + Lx8 LINE L1 5649 5999 -1474 7 798 2905 103 2 2 chr13 28009994 28010394 -92273918 + MTB LTR MaLR 1 400 0 8 798 22762 109 16 2 chr13 28010712 28014880 -92269432 + L1_Mus1 LINE L1 2353 6567 0 9 798 231 88 0 0 chr13 28017493 28017527 -92266785 + (TAGA)n Simple_repeat Simple_repeat 3 36 0 1 798 182 385 37 0 chr13 28017654 28017763 -92266549 + MIRc SINE MIR 94 206 -62 1 798 304 387 22 4 chr13 28018583 28018814 -92265498 + RMER15-int LTR ERVL 4534 4768 -231 1 798 1244 187 4 0 chr13 28018890 28019115 -92265197 - URR1A DNA MER1_type 0 226 1 1 798 759 97 18 0 chr13 28020439 28020553 -92263759 + MT2C_Mm LTR ERVL 282 397 -78 1 798 8037 48 1 1 chr13 28026015 28027056 -92257256 - L1Md_F2 LINE L1 -12 6570 5530 1 798 24555 61 5 0 chr13 28027057 28030278 -92254034 + L1_Mm LINE L1 1541 4775 -1108 1 798 300 27 0 0 chr13 28031168 28031205 -92253107 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 798 2814 50 3 0 chr13 28032532 28032875 -92251437 + ORR1A1 LTR MaLR 3 346 0 1 798 10380 64 143 4 chr13 28032875 28034449 -92249863 + ORR1A1-int LTR MaLR 1 1792 0 1 798 2623 62 0 0 chr13 28034449 28034787 -92249525 + ORR1A1 LTR MaLR 1 338 -8 1 798 383 214 62 0 chr13 28036855 28036967 -92247345 + Lx8 LINE L1 1294 1412 -4435 1 798 22 0 0 0 chr13 28036968 28036990 -92247322 + AT_rich Low_complexity Low_complexity 1 22 0 2 798 617 289 25 0 chr13 28037002 28037161 -92247151 + B3 SINE B2 1 163 -53 2 798 1860 258 78 29 chr13 28037170 28037238 -92247074 + Lx8 LINE L1 5147 5244 -603 1 798 323 45 0 22 chr13 28037238 28037284 -92247028 + (CAA)n Simple_repeat Simple_repeat 1 45 0 2 798 1860 282 86 30 chr13 28037284 28038169 -92246143 + Lx8 LINE L1 5245 6203 -1270 1 798 467 17 17 0 chr13 28038169 28038229 -92246083 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 798 1694 333 103 32 chr13 28038229 28038601 -92245711 + Lx8 LINE L1 6204 6620 -853 1 798 2357 91 32 9 chr13 28038601 28038946 -92245366 - L1Md_F2 LINE L1 -12 6570 6218 2 798 1694 333 103 32 chr13 28038946 28039307 -92245005 + Lx8 LINE L1 6621 6983 -490 1 798 297 122 0 20 chr13 28039307 28039357 -92244955 - RLTR25B LTR ERVK 0 1028 980 2 798 1620 110 139 17 chr13 28040065 28040352 -92243960 + Lx LINE L1 6325 6646 -8 2 798 2994 172 70 72 chr13 28040870 28040982 -92243330 + RLTR25B LTR ERVK 5 127 -901 2 798 501 32 0 0 chr13 28040982 28041045 -92243267 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 798 2994 172 70 72 chr13 28041045 28041608 -92242704 + RLTR25B LTR ERVK 128 677 -351 2 798 2499 168 41 51 chr13 28041608 28042141 -92242171 + Lx3C LINE L1 5972 6499 -477 2 798 984 292 145 37 chr13 28042134 28042989 -92241323 - Lx7 LINE L1 -962 6734 5758 3 798 1109 77 7 0 chr13 28042993 28043136 -92241176 + B1_Mus2 SINE Alu 2 145 -2 3 798 278 47 0 44 chr13 28043137 28043182 -92241130 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 798 919 272 7 7 chr13 28043182 28043452 -92240860 - Lx7 LINE L1 -114 5766 5497 3 798 239 265 187 26 chr13 28043448 28043603 -92240709 - Lx7 LINE L1 -583 5297 5118 3 798 999 66 73 0 chr13 28043627 28043763 -92240549 + B1_Mm SINE Alu 2 147 0 3 798 252 0 0 0 chr13 28044261 28044289 -92240023 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 798 1036 235 8 28 chr13 28044407 28044657 -92239655 - Lx6 LINE L1 -5 7455 7211 3 798 243 0 0 0 chr13 28044664 28044691 -92239621 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 798 2659 214 3 41 chr13 28044692 28045282 -92239030 - Lx2B LINE L1 -22 6978 6411 3 798 292 302 8 72 chr13 28045282 28045407 -92238905 - Lx6 LINE L1 -242 7218 7102 3 798 1083 283 184 29 chr13 28045403 28045958 -92238354 + Lx6 LINE L1 6461 7102 -358 3 798 4158 95 22 3 chr13 28046067 28046648 -92237664 - L1_Mus3 LINE L1 -20 6618 6027 3 798 240 235 0 19 chr13 28046683 28046735 -92237577 - Lx8 LINE L1 -1767 5706 5656 3 798 829 50 2 23 chr13 28046871 28047008 -92237304 - L1Md_F3 LINE L1 -923 5731 5602 4 798 7389 33 2 1 chr13 28047008 28047895 -92236417 + L1Md_F3 LINE L1 5697 6584 0 4 798 2585 61 0 44 chr13 28048333 28048696 -92235616 - L1_Mus3 LINE L1 -610 6028 5682 4 99 5334 107 39 0 chr13 28048693 28049513 -92234799 + L1_Mm LINE L1 3543 4394 -1489 4 799 28 0 0 0 chr13 28050043 28050071 -92234241 + AT_rich Low_complexity Low_complexity 1 28 0 4 799 755 333 71 57 chr13 28050187 28050640 -92233672 + MT2A LTR ERVL 2 460 -73 4 799 333 0 0 0 chr13 28050641 28050678 -92233634 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 799 5680 226 57 29 chr13 28050720 28051479 -92232833 + MERVL_2A-int LTR ERVL 1 785 -4976 4 799 303 28 0 0 chr13 28051479 28051515 -92232797 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 799 5680 229 52 31 chr13 28051515 28052324 -92231988 + MERVL_2A-int LTR ERVL 786 1608 -4153 4 799 2645 101 15 10 chr13 28052324 28052725 -92231587 + RLTR9D LTR ERVK 1 403 0 4 799 5680 229 52 31 chr13 28052725 28052737 -92231575 + MERVL_2A-int LTR ERVL 1609 1620 -4141 4 799 699 221 63 63 chr13 28052769 28053006 -92231306 + ETnERV2-int LTR ERVK 63 299 -3015 4 799 1454 27 6 0 chr13 28053015 28053198 -92231114 + L1Md_F2 LINE L1 6399 6582 0 5 799 189 94 0 0 chr13 28053216 28053248 -92231064 + (TAA)n Simple_repeat Simple_repeat 2 33 0 5 799 20085 117 19 8 chr13 28053364 28058058 -92226254 + ETnERV2-int LTR ERVK 773 6240 -1166 4 799 1055 179 21 0 chr13 28058096 28058286 -92226026 + ETnERV2-int LTR ERVK 6222 6415 -991 4 799 2189 64 72 118 chr13 28058287 28058678 -92225634 - RLTR1B LTR ERV1 0 512 140 5 799 605 265 20 7 chr13 28058693 28058845 -92225467 + MERVL_2A-int LTR ERVL 4558 4711 -1050 4 799 402 245 78 10 chr13 28058846 28058949 -92225363 + L1VL4 LINE L1 392 501 -5801 5 799 2921 134 38 35 chr13 28058956 28059343 -92224969 + L1VL4 LINE L1 440 827 -5475 5 799 258 56 0 0 chr13 28059343 28059379 -92224933 + (CAA)n Simple_repeat Simple_repeat 1 36 0 5 799 7614 106 26 11 chr13 28059379 28060392 -92223920 + L1VL4 LINE L1 828 1867 -1692 5 799 3176 23 59 0 chr13 28060392 28060780 -92223532 + IAPLTR2a LTR ERVK 1 411 0 5 799 7614 105 26 10 chr13 28060780 28061034 -92223278 + L1VL4 LINE L1 1868 2115 -1444 5 799 3811 181 32 12 chr13 28061024 28061310 -92223002 + L1_Mur2 LINE L1 3172 3456 -2421 5 799 2374 65 7 0 chr13 28061310 28061619 -92222693 + L1_Mus1 LINE L1 6257 6567 0 5 799 3811 181 32 12 chr13 28061619 28062143 -92222169 + L1_Mur2 LINE L1 3457 3997 -1880 5 799 4035 149 7 46 chr13 28062143 28062886 -92221426 + Lx2 LINE L1 6284 6997 0 5 799 2921 228 88 11 chr13 28062886 28063076 -92221236 + MERVL_2A-int LTR ERVL 4724 4964 -797 4 799 330 26 0 0 chr13 28063076 28063115 -92221197 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 5 799 2921 228 88 11 chr13 28063115 28063592 -92220720 + MERVL_2A-int LTR ERVL 4965 5443 -318 4 799 247 147 73 12 chr13 28063592 28063757 -92220555 + (TA)n Simple_repeat Simple_repeat 1 175 0 6 799 725 140 29 0 chr13 28063757 28063893 -92220419 + MERVL_2A-int LTR ERVL 5435 5574 -187 4 799 297 267 25 41 chr13 28063904 28064025 -92220287 + ORR1A3-int LTR MaLR 521 639 -1324 6 799 257 231 0 0 chr13 28064025 28064077 -92220235 + MERVL_2A-int LTR ERVL 5706 5757 -4 4 799 246 262 57 28 chr13 28064651 28064757 -92219555 - ORR1D2 LTR MaLR -21 349 241 6 799 513 273 29 38 chr13 28064896 28065135 -92219177 + Lx8 LINE L1 5505 5750 -1946 6 799 23 0 0 0 chr13 28065414 28065437 -92218875 + AT_rich Low_complexity Low_complexity 1 23 0 6 799 289 321 0 0 chr13 28065479 28065563 -92218749 + Lx8 LINE L1 6283 6366 -1107 6 799 391 35 17 17 chr13 28065596 28065654 -92218658 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 6 799 1316 246 103 16 chr13 28065661 28066028 -92218284 + MTC LTR MaLR 13 411 -10 6 799 1957 342 75 4 chr13 28066047 28066964 -92217348 + Lx8 LINE L1 6371 7352 -121 6 799 559 322 53 71 chr13 28067612 28067905 -92216407 - MTE-int LTR MaLR -2 1578 1292 6 799 3603 135 28 23 chr13 28067905 28068520 -92215792 + Lx LINE L1 6037 6654 0 6 799 559 322 53 71 chr13 28068520 28068564 -92215748 - MTE-int LTR MaLR -289 1291 1247 6 799 229 321 108 24 chr13 28069602 28069768 -92214544 + RMER15 LTR ERVL 356 535 -40 6 799 32 57 0 0 chr13 28070319 28070372 -92213940 + AT_rich Low_complexity Low_complexity 1 53 0 7 799 558 350 59 40 chr13 28070451 28070773 -92213539 - Lx8 LINE L1 -145 7328 7001 7 799 225 83 0 0 chr13 28070796 28070832 -92213480 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 7 799 2464 71 54 0 chr13 28070842 28071192 -92213120 - MTB LTR MaLR -31 369 1 7 799 1462 347 56 32 chr13 28071326 28072273 -92212039 - Lx8 LINE L1 -625 6848 5879 7 799 546 58 35 0 chr13 28072282 28072369 -92211943 + (TC)n Simple_repeat Simple_repeat 2 91 0 7 799 4161 285 103 40 chr13 28072397 28073321 -92210991 - Lx8 LINE L1 -56 5824 4845 7 799 189 0 0 0 chr13 28073321 28073342 -92210970 + (GTTTG)n Simple_repeat Simple_repeat 2 22 0 7 799 4161 285 103 40 chr13 28073342 28074758 -92209554 - Lx8 LINE L1 -1036 4844 3337 7 799 932 283 21 18 chr13 28074772 28075056 -92209256 - Lx6 LINE L1 -40 7420 7136 7 799 35206 46 5 6 chr13 28075058 28080482 -92203830 + L1Md_T LINE L1 70 5589 -297 7 799 8429 32 1 0 chr13 28080482 28081477 -92202835 + L1Md_T LINE L1 5590 6585 0 7 799 520 309 0 13 chr13 28081477 28081618 -92202694 - Lx6 LINE L1 -311 7149 7009 7 799 489 248 60 18 chr13 28081619 28081787 -92202525 - Lx8 LINE L1 -2537 3343 3169 7 799 1850 143 39 24 chr13 28081844 28082174 -92202138 - Lx LINE L1 0 6654 6320 7 799 553 287 40 57 chr13 28082276 28082453 -92201859 - B3A SINE B2 0 198 25 7 799 7523 99 5 7 chr13 28082465 28083630 -92200682 + L1_Mus3 LINE L1 5470 6632 -6 8 799 758 318 110 29 chr13 28083657 28084247 -92200065 - L1_Mur3 LINE L1 -2797 3083 2446 8 799 1281 227 55 25 chr13 28084643 28085004 -92199308 + ORR1D1 LTR MaLR 1 372 -2 8 799 24 67 0 0 chr13 28087351 28087396 -92196916 + AT_rich Low_complexity Low_complexity 1 45 0 8 799 1101 259 93 8 chr13 28087682 28088067 -92196245 + MTD LTR MaLR 1 418 -1 8 799 846 319 110 53 chr13 28088091 28088346 -92195966 + MTD-int LTR MaLR 24 316 -942 8 799 1513 256 21 33 chr13 28088346 28088770 -92195542 - MTD LTR MaLR 0 419 1 8 799 846 319 110 53 chr13 28088770 28088865 -92195447 + MTD-int LTR MaLR 317 424 -834 8 799 224 59 29 0 chr13 28088865 28088899 -92195413 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 799 846 319 110 53 chr13 28088899 28089127 -92195185 + MTD-int LTR MaLR 425 634 -624 8 799 1126 64 0 0 chr13 28090505 28090645 -92193667 - B1_Mm SINE Alu -7 140 1 8 799 1638 211 58 42 chr13 28091132 28091423 -92192889 + ORR1B2 LTR MaLR 1 299 -68 8 799 5175 37 0 3 chr13 28091423 28092044 -92192268 + L1Md_F2 LINE L1 5961 6579 -3 8 799 1638 211 58 42 chr13 28092044 28092113 -92192199 + ORR1B2 LTR MaLR 300 367 0 8 799 426 69 0 0 chr13 28093039 28093097 -92191215 + (TA)n Simple_repeat Simple_repeat 1 58 0 9 799 21 36 0 0 chr13 28093105 28093133 -92191179 + AT_rich Low_complexity Low_complexity 1 28 0 9 799 1402 217 118 6 chr13 28094724 28095063 -92189249 + Lx5 LINE L1 6671 7047 -3 9 799 21 0 0 0 chr13 28095098 28095119 -92189193 + AT_rich Low_complexity Low_complexity 1 21 0 9 799 628 194 135 18 chr13 28095577 28095740 -92188572 + RLTR18-int LTR ERVK 4115 4296 -1065 9 799 492 18 0 0 chr13 28095740 28095797 -92188515 + (CATA)n Simple_repeat Simple_repeat 2 58 0 9 799 188 254 49 33 chr13 28097132 28097193 -92187119 + L3 LINE CR1 111 172 -4317 9 799 252 0 0 0 chr13 28098604 28098632 -92185680 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 9 799 301 0 68 0 chr13 28098955 28098999 -92185313 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 9 799 927 290 92 75 chr13 28100088 28101129 -92183183 + L1MA4A LINE L1 4204 5262 -881 9 799 264 292 52 37 chr13 28101221 28101356 -92182956 + L1_Mur3 LINE L1 5343 5479 -401 1 799 758 131 6 0 chr13 28101493 28101661 -92182651 + (TC)n Simple_repeat Simple_repeat 1 169 0 1 799 360 0 0 0 chr13 28101661 28101701 -92182611 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 799 1082 305 91 11 chr13 28101728 28102102 -92182210 + MTD LTR MaLR 14 417 -2 1 799 463 323 64 8 chr13 28102103 28102353 -92181959 + L1MA4A LINE L1 5667 5930 -373 9 799 488 328 33 0 chr13 28102896 28103076 -92181236 - ID_B1 SINE B4 0 224 39 1 799 274 235 56 0 chr13 28104137 28104299 -92180013 + (CA)n Simple_repeat Simple_repeat 2 172 0 1 799 897 110 0 0 chr13 28104659 28104795 -92179517 + (TC)n Simple_repeat Simple_repeat 1 136 0 1 799 853 333 12 8 chr13 28104927 28105181 -92179131 - MTEa LTR MaLR -124 255 1 1 799 929 327 204 12 chr13 28105182 28105356 -92178956 - MTEa-int LTR MaLR -1 1579 1341 1 799 501 17 0 0 chr13 28105356 28105414 -92178898 + (TAAAA)n Simple_repeat Simple_repeat 2 59 0 1 799 929 327 204 12 chr13 28105414 28105749 -92178563 - MTEa-int LTR MaLR -240 1340 973 1 799 423 277 74 42 chr13 28105751 28106062 -92178250 - L1M2 LINE L1 -542 5755 5427 1 799 966 102 15 0 chr13 28106114 28106251 -92178061 - B1_Mus1 SINE Alu 0 148 10 1 799 388 223 9 104 chr13 28106148 28106263 -92178049 - MT2B LTR ERVL -337 264 161 1 799 546 264 32 0 chr13 28106836 28106991 -92177321 - Lx7 LINE L1 -350 7346 7187 1 799 437 299 104 29 chr13 28107058 28107337 -92176975 + RMER15-int LTR ERVL 4148 4447 -552 1 799 288 345 64 41 chr13 28108113 28108285 -92176027 + RMER15 LTR ERVL 354 529 -46 1 799 21 36 0 0 chr13 28111674 28111702 -92172610 + AT_rich Low_complexity Low_complexity 1 28 0 1 799 214 95 0 45 chr13 28112910 28112954 -92171358 + (TAA)n Simple_repeat Simple_repeat 3 44 0 1 799 1373 206 10 64 chr13 28113472 28113784 -92170528 - ORR1A4 LTR MaLR 0 329 35 1 799 246 178 0 0 chr13 28113829 28113874 -92170438 - ORR1A4 LTR MaLR -284 45 1 1 799 216 0 0 0 chr13 28113913 28113937 -92170375 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1 799 962 266 33 49 chr13 28114376 28114681 -92169631 - RMER15 LTR ERVL -1 574 275 1 799 1064 294 74 30 chr13 28116530 28116867 -92167445 - ORR1E LTR MaLR -2 357 6 1 799 420 20 0 0 chr13 28116949 28116998 -92167314 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 799 519 333 72 14 chr13 28117149 28117678 -92166634 + L1_Mur3 LINE L1 5157 5718 -579 1 799 414 0 0 0 chr13 28117684 28117730 -92166582 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 799 1042 149 30 11 chr13 28117742 28117946 -92166366 - URR1B DNA MER1_type 0 225 1 1 799 252 240 42 0 chr13 28117949 28118045 -92166267 + L1_Mur3 LINE L1 5742 5841 -459 1 799 218 213 0 21 chr13 28118347 28118395 -92165917 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 799 737 288 161 10 chr13 28118589 28118950 -92165362 + Lx8 LINE L1 7045 7467 -6 1 799 1123 162 24 14 chr13 28119095 28119302 -92165010 - ORR1C2 LTR MaLR -4 380 172 1 799 676 210 44 16 chr13 28119351 28119548 -92164764 - ORR1C2 LTR MaLR -140 238 44 1 799 444 203 0 0 chr13 28119585 28119659 -92164653 - Lx2A1 LINE L1 -542 6466 6393 1 799 2754 139 88 12 chr13 28119659 28120160 -92164152 + Lx2A1 LINE L1 6470 7008 0 1 799 186 43 0 0 chr13 28120161 28120184 -92164128 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 799 871 276 35 23 chr13 28120441 28120789 -92163523 + L1_Rod LINE L1 2447 2798 -3049 1 799 387 345 17 8 chr13 28120854 28120971 -92163341 + B4A SINE B4 61 178 -114 1 799 180 152 0 0 chr13 28121077 28121110 -92163202 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 799 318 317 146 28 chr13 28121835 28122082 -92162230 + RMER15-int LTR ERVL 4155 4430 -569 1 799 517 322 65 19 chr13 28122144 28122359 -92161953 + RMER15-int LTR ERVL 4503 4727 -272 1 799 189 107 0 0 chr13 28122386 28122414 -92161898 + (T)n Simple_repeat Simple_repeat 1 28 0 1 799 263 358 77 18 chr13 28122604 28122772 -92161540 + RMER15 LTR ERVL 381 558 -17 1 799 23 0 0 0 chr13 28123533 28123556 -92160756 + AT_rich Low_complexity Low_complexity 1 23 0 1 799 360 0 0 0 chr13 28125056 28125096 -92159216 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 799 471 360 54 22 chr13 28127825 28128326 -92155986 + MMERGLN-int LTR ERV1 2905 3456 -4100 1 799 587 236 16 0 chr13 28128422 28128549 -92155763 + B1_Mur4 SINE Alu 1 129 -21 1 799 288 130 0 0 chr13 28128550 28128596 -92155716 + (GGGAGA)n Simple_repeat Simple_repeat 4 49 0 1 799 563 371 27 35 chr13 28128599 28129328 -92154984 + MuRRS4-int LTR ERV1 2246 2660 -2403 1 799 16763 52 2 1 chr13 28129329 28132159 -92152153 - L1Md_F3 LINE L1 0 6584 3751 1 799 523 326 30 16 chr13 28132800 28133149 -92151163 + MuRRS4-int LTR ERV1 3233 3453 -1864 1 799 487 301 38 11 chr13 28133907 28134092 -92150220 + RMER15-int LTR ERVL 4250 4439 -560 1 799 273 340 77 14 chr13 28134636 28134779 -92149533 + RMER15 LTR ERVL 408 559 -16 1 799 764 272 25 22 chr13 28135096 28135311 -92149001 + B3 SINE B2 1 213 -3 1 799 34 0 0 0 chr13 28135311 28135345 -92148967 + AT_rich Low_complexity Low_complexity 1 34 0 1 799 21 57 0 0 chr13 28135900 28135935 -92148377 + AT_rich Low_complexity Low_complexity 1 35 0 1 799 266 133 22 0 chr13 28137940 28137985 -92146327 - ORR1A4 LTR MaLR 0 329 284 1 799 7158 127 20 15 chr13 28137988 28139346 -92144966 + Lx2B LINE L1 4734 6093 -907 1 799 265 47 23 23 chr13 28139510 28139554 -92144758 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 1 799 1016 314 41 60 chr13 28139604 28139647 -92144665 - MTD LTR MaLR 0 419 376 1 799 1191 54 0 0 chr13 28139647 28139794 -92144518 + B1_Mus2 SINE Alu 1 147 0 1 799 1016 314 41 60 chr13 28139794 28140164 -92144148 - MTD LTR MaLR -44 375 14 1 799 858 91 0 0 chr13 28140184 28140305 -92144007 + (GGAAA)n Simple_repeat Simple_repeat 5 125 0 1 799 393 223 152 55 chr13 28140321 28140558 -92143754 - MTD-int LTR MaLR -7 1251 992 1 799 180 0 0 0 chr13 28140565 28140585 -92143727 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1 799 5996 80 23 6 chr13 28140594 28141423 -92142889 - L1Md_F2 LINE L1 -1 6581 5739 1 799 37589 43 1 3 chr13 28141427 28147451 -92136861 - L1Md_T LINE L1 0 6585 477 1 799 32402 90 12 6 chr13 28147450 28152796 -92131516 - L1Md_F LINE L1 -130 5753 371 1 799 1108 254 34 26 chr13 28153032 28153420 -92130892 + Lx9 LINE L1 4837 5227 -620 1 799 622 270 70 25 chr13 28153433 28153634 -92130678 + Lx9 LINE L1 5497 5706 -141 1 799 279 299 54 54 chr13 28153635 28153727 -92130585 + RLTR18B LTR ERVK 114 205 -307 1 799 1150 285 89 43 chr13 28153732 28154102 -92130210 + RLTR18B LTR ERVK 123 509 -3 1 799 1530 294 114 34 chr13 28154153 28155221 -92129091 + Lx9 LINE L1 6306 7459 -185 1 799 405 0 0 0 chr13 28155225 28155270 -92129042 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 799 336 269 0 42 chr13 28155637 28155757 -92128555 + Lx7 LINE L1 7563 7677 -19 1 799 3007 199 75 18 chr13 28157368 28158136 -92126176 + Lx LINE L1 5843 6654 0 1 799 303 264 103 52 chr13 28158165 28158281 -92126031 + RMER15-int LTR ERVL 1505 1626 -3373 1 799 543 322 138 3 chr13 28158904 28159222 -92125090 + L1MD LINE L1 2741 3101 -3045 1 799 297 169 54 39 chr13 28159254 28159383 -92124929 + (TA)n Simple_repeat Simple_repeat 2 132 0 1 799 194 136 82 20 chr13 28159414 28159512 -92124800 + (TTATA)n Simple_repeat Simple_repeat 1 104 0 1 799 363 182 46 29 chr13 28159515 28159748 -92124564 + (TA)n Simple_repeat Simple_repeat 1 236 0 1 799 208 200 49 12 chr13 28159766 28159847 -92124465 + (TATAA)n Simple_repeat Simple_repeat 1 84 0 1 799 30 0 0 0 chr13 28159850 28159880 -92124432 + AT_rich Low_complexity Low_complexity 1 30 0 1 799 257 328 8 30 chr13 28159885 28160017 -92124295 + L1_Mur3 LINE L1 1793 1921 -3959 1 799 273 162 161 9 chr13 28160005 28160117 -92124195 + Lx9 LINE L1 7515 7643 -1 1 799 21 36 0 0 chr13 28160124 28160152 -92124160 + AT_rich Low_complexity Low_complexity 1 28 0 1 799 372 287 52 0 chr13 28160272 28160408 -92123904 + L1_Mur3 LINE L1 2066 2208 -3672 1 799 977 332 68 63 chr13 28160412 28161174 -92123138 + RMER15-int LTR ERVL 4226 4991 -8 1 799 249 297 0 0 chr13 28161494 28161558 -92122754 + RMER15 LTR ERVL 375 438 -137 1 799 4229 62 0 4 chr13 28162586 28163123 -92121189 + L1Md_F2 LINE L1 6035 6569 -13 1 799 31 0 0 0 chr13 28163132 28163163 -92121149 + AT_rich Low_complexity Low_complexity 1 31 0 1 799 324 70 0 0 chr13 28163485 28163528 -92120784 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 799 34 0 0 0 chr13 28164552 28164586 -92119726 + AT_rich Low_complexity Low_complexity 1 34 0 1 799 968 152 6 15 chr13 28164615 28164957 -92119355 + GA-rich Low_complexity Low_complexity 1 338 0 1 799 17811 121 20 57 chr13 28165258 28171376 -92112936 - L1_Mus2 LINE L1 0 6566 1237 1 799 33094 74 3 2 chr13 28171374 28177574 -92106738 - L1Md_F2 LINE L1 -12 6570 368 1 799 4460 150 243 8 chr13 28177575 28178552 -92105760 - L1_Mus2 LINE L1 -5734 1250 45 1 800 216 0 0 0 chr13 28181331 28181355 -92102957 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1 800 6724 33 9 0 chr13 28181355 28182204 -92102108 - L1Md_F3 LINE L1 -26 6558 5702 1 800 31 44 0 0 chr13 28182743 28182788 -92101524 + AT_rich Low_complexity Low_complexity 1 45 0 1 800 4513 73 23 7 chr13 28183421 28184029 -92100283 + L1Md_F2 LINE L1 5963 6580 -2 1 800 671 310 8 4 chr13 28184754 28184964 -92099348 + B3A SINE B2 1 210 -6 1 800 257 241 0 0 chr13 28184965 28185019 -92099293 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 1 800 266 75 0 0 chr13 28185483 28185523 -92098789 + B1_Mm SINE Alu 108 147 0 1 800 459 135 0 0 chr13 28185523 28185619 -92098693 + (A)n Simple_repeat Simple_repeat 1 96 0 1 800 303 49 0 0 chr13 28185853 28185894 -92098418 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 800 846 269 23 50 chr13 28186768 28186987 -92097325 + B3 SINE B2 4 216 0 1 800 22 80 0 0 chr13 28186987 28187037 -92097275 + AT_rich Low_complexity Low_complexity 1 50 0 1 800 327 143 12 38 chr13 28187488 28187568 -92096744 + (CAGA)n Simple_repeat Simple_repeat 3 80 0 1 800 3290 178 27 1 chr13 28188166 28188492 -92095820 - L1_Mur2 LINE L1 -918 4959 4623 1 800 213 39 0 0 chr13 28188492 28188518 -92095794 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 800 3290 178 27 1 chr13 28188518 28188851 -92095461 - L1_Mur2 LINE L1 -1255 4622 4284 1 800 279 53 0 0 chr13 28188854 28188892 -92095420 - L1_Mur2 LINE L1 -1805 4072 4035 1 800 3691 166 40 17 chr13 28188896 28190060 -92094252 + Lx2 LINE L1 5180 6373 -624 1 800 2938 166 19 0 chr13 28190080 28190621 -92093691 + Lx2 LINE L1 6447 6997 0 1 800 21 0 0 0 chr13 28191038 28191059 -92093253 + AT_rich Low_complexity Low_complexity 1 21 0 1 800 487 302 122 4 chr13 28191062 28191308 -92093004 - Lx8 LINE L1 -6 7467 7193 1 800 4440 75 12 5 chr13 28192839 28193432 -92090880 - L1Md_F2 LINE L1 -1 6581 5985 1 800 24 0 0 0 chr13 28193989 28194013 -92090299 + AT_rich Low_complexity Low_complexity 1 24 0 1 800 27167 99 35 9 chr13 28194015 28199205 -92085107 + L1VL1 LINE L1 246 5571 -312 1 800 260 324 92 0 chr13 28199443 28199585 -92084727 + Lx7 LINE L1 7126 7280 -416 1 800 234 278 98 0 chr13 28201012 28201145 -92083167 + L1MD LINE L1 2838 2983 -3163 2 800 3460 34 40 5 chr13 28201216 28201636 -92082676 - RLTR10C LTR ERVK -1 435 1 2 800 1738 233 37 73 chr13 28201645 28202292 -92082020 - Lx9 LINE L1 -2 7642 7019 2 800 887 263 88 57 chr13 28204419 28204770 -92079542 - ORR1D2 LTR MaLR 0 370 9 2 800 195 42 0 0 chr13 28205149 28205173 -92079139 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 800 518 192 0 70 chr13 28205173 28205302 -92079010 + RMER10B LTR ERVL 221 340 -58 2 800 236 324 57 82 chr13 28207089 28207247 -92077065 + MER20 DNA MER1_type 60 213 -6 2 800 369 109 0 0 chr13 28207492 28207547 -92076765 + (TTTC)n Simple_repeat Simple_repeat 1 55 0 2 800 6925 140 14 51 chr13 28207580 28207716 -92076596 - Lx2A LINE L1 -9 6999 6913 2 800 6919 62 30 8 chr13 28207716 28208625 -92075687 - RLTR13B3 LTR ERVK 0 929 1 2 800 6925 140 14 51 chr13 28208625 28209726 -92074586 - Lx2A LINE L1 -96 6912 5807 2 800 247 270 27 99 chr13 28209754 28209865 -92074447 - Lx9 LINE L1 -514 7130 7028 2 800 1687 309 64 17 chr13 28209865 28211213 -92073099 + Lx9 LINE L1 5431 7026 -618 2 800 6835 186 43 5 chr13 28213300 28214836 -92069476 - Lx5 LINE L1 -4 7046 5441 2 800 1239 159 61 15 chr13 28215939 28216146 -92068166 - Lx5 LINE L1 -424 5453 5235 2 800 245 51 26 0 chr13 28216146 28216185 -92068127 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 800 1239 159 61 15 chr13 28216185 28216238 -92068074 - Lx5 LINE L1 -643 5234 5182 2 800 328 74 0 53 chr13 28216240 28216289 -92068023 - L1_Mus2 LINE L1 -1 6565 6517 2 800 2773 12 95 6 chr13 28216289 28216626 -92067686 - IAPLTR1_Mm LTR ERVK 0 367 1 2 800 51460 33 15 3 chr13 28216633 28223022 -92061290 - IAPEz-int LTR ERVK -6 6475 8 2 800 2744 12 95 6 chr13 28223022 28223359 -92060953 - IAPLTR1_Mm LTR ERVK 0 367 1 2 800 2772 60 6 0 chr13 28223359 28223707 -92060605 - L1_Mus2 LINE L1 -44 6522 6173 2 800 3998 189 26 6 chr13 28223706 28224545 -92059767 - Lx5 LINE L1 -683 5194 4339 2 800 5626 170 26 46 chr13 28224556 28226610 -92057702 + L1VL2 LINE L1 9 2015 -1600 2 800 656 150 16 40 chr13 28226611 28226736 -92057576 + MT2C_Mm LTR ERVL 276 397 -78 2 800 292 64 0 130 chr13 28226972 28227026 -92057286 - MusHAL1 LINE L1 -2829 525 479 2 800 3860 108 0 2 chr13 28227027 28227632 -92056680 + L1VL4 LINE L1 405 1008 -2551 2 800 781 149 14 0 chr13 28227653 28227794 -92056518 - L1_Mur3 LINE L1 -1872 4005 3863 2 800 9679 169 78 85 chr13 28227797 28228397 -92055915 - L1_Mur3 LINE L1 -2206 3671 2968 2 800 861 10 0 0 chr13 28228397 28228495 -92055817 + (TC)n Simple_repeat Simple_repeat 1 98 0 2 800 279 0 0 0 chr13 28228495 28228525 -92055787 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 800 9679 169 78 85 chr13 28228525 28229575 -92054737 - L1_Mur3 LINE L1 -2910 2967 2050 2 800 360 0 0 0 chr13 28229575 28229615 -92054697 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 800 9679 186 64 68 chr13 28229615 28230762 -92053550 - L1_Mur3 LINE L1 -3828 2049 836 2 800 528 68 0 0 chr13 28230991 28231064 -92053248 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 2 800 1097 278 158 40 chr13 28231075 28231681 -92052631 - Lx9 LINE L1 -191 7453 6776 2 800 8572 120 55 8 chr13 28231740 28233213 -92051099 + Lx2 LINE L1 5450 6996 -1 2 800 189 0 0 0 chr13 28233743 28233764 -92050548 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 2 800 239 306 19 48 chr13 28234365 28234468 -92049844 + RMER15 LTR ERVL 336 435 -140 2 800 1371 70 22 0 chr13 28234663 28234848 -92049464 + B2_Mm1t SINE B2 1 189 -4 2 800 5711 87 5 0 chr13 28234932 28235694 -92048618 - L1_Mus1 LINE L1 0 6567 5802 2 800 275 322 51 25 chr13 28235694 28235812 -92048500 + MER20 DNA MER1_type 97 217 -2 2 800 468 35 0 0 chr13 28236147 28236205 -92048107 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 800 38 39 0 0 chr13 28236264 28236316 -92047996 + AT_rich Low_complexity Low_complexity 1 52 0 2 800 213 366 0 0 chr13 28236729 28236800 -92047512 - B4A SINE B4 -220 72 2 2 800 201 108 0 0 chr13 28237075 28237112 -92047200 + (T)n Simple_repeat Simple_repeat 1 37 0 2 800 5135 156 22 16 chr13 28237673 28238594 -92045718 - Lx2B LINE L1 -15 6985 6060 2 800 37 52 0 0 chr13 28239165 28239223 -92045089 + AT_rich Low_complexity Low_complexity 1 58 0 2 800 304 365 7 7 chr13 28239720 28239866 -92044446 + Lx8 LINE L1 7186 7331 -142 2 800 360 0 0 0 chr13 28240178 28240218 -92044094 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 800 1108 29 0 0 chr13 28241001 28241140 -92043172 - B1_Mus1 SINE Alu 0 148 10 2 800 303 28 0 0 chr13 28241303 28241339 -92042973 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 800 352 37 167 0 chr13 28241958 28242012 -92042300 + B1_Mus2 SINE Alu 85 147 0 2 800 522 0 0 0 chr13 28242019 28242077 -92042235 + (GGAAA)n Simple_repeat Simple_repeat 3 60 0 2 800 1120 48 7 39 chr13 28242419 28242572 -92041740 + B1_Mus1 SINE Alu 1 148 0 2 800 180 0 0 0 chr13 28242587 28242607 -92041705 + (A)n Simple_repeat Simple_repeat 1 20 0 2 800 22 35 0 0 chr13 28243288 28243317 -92040995 + AT_rich Low_complexity Low_complexity 1 29 0 2 800 24 32 0 0 chr13 28243379 28243410 -92040902 + AT_rich Low_complexity Low_complexity 1 31 0 2 800 180 77 0 0 chr13 28243444 28243470 -92040842 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 2 800 477 292 39 24 chr13 28243549 28243756 -92040556 - Lx9 LINE L1 -1591 6053 5844 2 800 231 245 66 54 chr13 28244054 28244205 -92040107 + L1MDa LINE L1 1336 1480 -5153 2 800 247 348 14 14 chr13 28244292 28244432 -92039880 + L1MDa LINE L1 1584 1723 -4910 2 800 462 289 17 17 chr13 28244770 28244969 -92039343 + L1MDa LINE L1 3887 4093 -2444 2 800 543 143 65 19 chr13 28244988 28245095 -92039217 + L1_Rod LINE L1 2846 2957 -2890 2 800 1646 307 16 12 chr13 28245096 28245610 -92038702 - L1_Rod LINE L1 -6640 532 17 2 800 587 120 0 0 chr13 28245662 28245754 -92038558 + Lx4B LINE L1 5707 5798 -1260 2 800 912 276 26 26 chr13 28245754 28246067 -92038245 + L1VL2 LINE L1 88 400 -5935 2 800 23763 156 58 16 chr13 28246079 28248619 -92035693 + L1_Mus2 LINE L1 342 2997 -2886 2 800 495 0 0 0 chr13 28248619 28248674 -92035638 + (GA)n Simple_repeat Simple_repeat 2 56 0 2 800 23763 119 39 16 chr13 28248674 28252373 -92031939 + L1_Mus2 LINE L1 2998 6566 0 2 800 3760 228 67 14 chr13 28252375 28252974 -92031338 + Lx4B LINE L1 5782 6383 -675 2 800 180 0 0 0 chr13 28252974 28252994 -92031318 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 800 3760 249 72 15 chr13 28252994 28253516 -92030796 + Lx4B LINE L1 6382 7058 0 2 800 730 318 92 16 chr13 28253672 28254346 -92029966 + L1_Mur3 LINE L1 4082 4806 -1074 2 800 1844 237 28 5 chr13 28254402 28254797 -92029515 + MTD LTR MaLR 3 406 -13 2 800 299 254 126 30 chr13 28254815 28254979 -92029333 + L1MA4 LINE L1 4818 5053 -1087 2 800 363 320 99 23 chr13 28255020 28255282 -92029030 + L1MA4 LINE L1 5491 5772 -525 2 800 314 312 0 0 chr13 28255294 28255374 -92028938 + B3 SINE B2 1 80 -136 2 800 710 205 0 0 chr13 28255374 28255501 -92028811 + MTD LTR MaLR 293 419 0 2 800 537 232 64 0 chr13 28255501 28255626 -92028686 + B3 SINE B2 84 216 0 2 800 421 240 56 0 chr13 28255684 28255809 -92028503 + L1MA4 LINE L1 5793 5924 -376 2 800 322 271 8 106 chr13 28255882 28256014 -92028298 + RMER15-int LTR ERVL 4226 4344 -655 2 800 578 325 55 38 chr13 28256137 28256482 -92027830 + RMER15-int LTR ERVL 4514 4864 -135 2 800 534 172 0 0 chr13 28257408 28257507 -92026805 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 800 21 57 0 0 chr13 28257894 28257929 -92026383 + AT_rich Low_complexity Low_complexity 1 35 0 2 800 1191 140 100 0 chr13 28258231 28258431 -92025881 - URR1A DNA MER1_type -6 220 1 2 800 180 312 123 12 chr13 28259119 28259200 -92025112 + L3 LINE CR1 835 924 -3565 2 800 425 368 86 24 chr13 28261041 28261437 -92022875 + RMER15-int LTR ERVL 4273 4692 -307 2 800 345 47 0 0 chr13 28261437 28261480 -92022832 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 2 800 425 368 86 24 chr13 28261480 28261551 -92022761 + RMER15-int LTR ERVL 4693 4768 -231 2 800 1200 111 0 0 chr13 28262475 28262655 -92021657 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 800 333 118 0 0 chr13 28262805 28262856 -92021456 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 800 393 22 0 0 chr13 28264169 28264215 -92020097 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 2 800 548 171 21 7 chr13 28264540 28264681 -92019631 - L1_Mus4 LINE L1 -1 6635 6493 2 800 16743 146 16 6 chr13 28264681 28268147 -92016165 - L1VL4 LINE L1 -1803 4080 581 2 800 542 136 0 8 chr13 28269100 28269219 -92015093 + (TG)n Simple_repeat Simple_repeat 2 119 0 2 800 3597 141 77 5 chr13 28269277 28270363 -92013949 + L1_Mur1 LINE L1 211 1695 -4191 2 800 7058 115 57 14 chr13 28270334 28270539 -92013773 + L1_Mur1 LINE L1 3130 3338 -2548 2 800 3239 38 5 2 chr13 28270539 28270932 -92013380 + MTA_Mm LTR MaLR 1 394 -2 2 800 7058 115 57 14 chr13 28270932 28271964 -92012348 + L1_Mur1 LINE L1 3339 4420 -1466 2 800 587 162 8 25 chr13 28271967 28272087 -92012225 - RMER3D-int LTR ERVK -798 2044 1927 2 800 588 200 41 35 chr13 28272110 28272255 -92012057 - RMER3D-int LTR ERVK -1165 1677 1532 2 800 3025 40 3 0 chr13 28272270 28272640 -92011672 + L1Md_F2 LINE L1 6200 6570 -12 2 800 1805 204 46 59 chr13 28272723 28273140 -92011172 - RMER3D-int LTR ERVK -1309 1533 1121 2 800 1305 83 0 0 chr13 28273140 28273320 -92010992 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 2 800 1805 204 46 59 chr13 28273320 28273428 -92010884 - RMER3D-int LTR ERVK -1722 1120 1015 2 800 687 226 38 42 chr13 28273561 28273848 -92010464 - RMER3D-int LTR ERVK -1981 861 358 2 800 714 179 68 42 chr13 28273862 28274054 -92010258 - RMER3D-int LTR ERVK -1994 848 652 2 800 566 112 45 0 chr13 28274066 28274155 -92010157 - RMER3D-int LTR ERVK -2259 583 491 2 800 274 204 32 21 chr13 28278404 28278499 -92005813 - Lx9 LINE L1 -32 7612 7517 2 800 324 70 0 0 chr13 28278545 28278588 -92005724 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 800 4416 77 2 3 chr13 28278592 28279176 -92005136 - L1Md_F2 LINE L1 -19 6563 5981 2 800 339 251 77 132 chr13 28280082 28280250 -92004062 - RMER15-int LTR ERVL -22 4977 4812 2 800 708 12 0 0 chr13 28280250 28280331 -92003981 + (TC)n Simple_repeat Simple_repeat 1 81 0 2 800 339 251 77 132 chr13 28280331 28280488 -92003824 - RMER15-int LTR ERVL -188 4811 4670 2 800 2782 82 42 2 chr13 28280488 28280891 -92003421 + BGLII LTR ERVK 1 419 -2 2 800 441 0 0 0 chr13 28281234 28281283 -92003029 + (TAAA)n Simple_repeat Simple_repeat 4 52 0 2 800 336 175 0 0 chr13 28281301 28281364 -92002948 + A-rich Low_complexity Low_complexity 1 63 0 2 800 283 268 173 19 chr13 28283837 28283995 -92000317 - Lx8 LINE L1 -1555 5918 5703 2 800 2427 160 22 24 chr13 28284374 28284526 -91999786 - MTC LTR MaLR -5 416 272 2 800 1899 122 9 59 chr13 28284526 28284865 -91999447 - RLTRETN_Mm LTR ERVK 0 322 1 2 800 2427 160 22 24 chr13 28284865 28284923 -91999389 - MTC LTR MaLR -150 271 209 2 800 1064 185 102 0 chr13 28284923 28285128 -91999184 - URR1A DNA MER1_type 0 226 1 2 800 2427 160 22 24 chr13 28285128 28285333 -91998979 - MTC LTR MaLR -213 208 2 2 800 305 288 25 0 chr13 28285806 28285886 -91998426 - ORR1E LTR MaLR -244 115 34 2 800 360 276 150 65 chr13 28285921 28286181 -91998131 - L1MD LINE L1 -2873 3273 2992 2 800 23341 97 17 2 chr13 28286181 28290324 -91993988 + L1Md_F LINE L1 570 4775 -1108 2 800 2272 105 73 33 chr13 28290346 28290741 -91993571 - IAPLTR2a LTR ERVK 0 411 1 2 800 5567 53 4 19 chr13 28290743 28291498 -91992814 - IAPEz-int LTR ERVK -2 6479 5736 2 800 2059 79 0 0 chr13 28291497 28291775 -91992537 - IAPEz-int LTR ERVK -4845 1636 1359 2 800 3359 61 1 14 chr13 28291778 28292428 -91991884 - IAPEz-int LTR ERVK -5822 659 168 2 800 226 327 0 0 chr13 28292428 28292483 -91991829 - RLTR27 LTR ERVK -34 275 221 2 800 965 116 78 52 chr13 28292483 28292732 -91991580 - IAPEz-int LTR ERVK -7331 250 10 2 800 281 74 0 85 chr13 28292765 28292824 -91991488 - IAPEz-int LTR ERVK -1931 56 3 2 800 2257 110 73 33 chr13 28292826 28293221 -91991091 - IAPLTR2a LTR ERVK 0 411 1 2 800 5828 78 0 0 chr13 28293221 28294037 -91990275 + L1Md_F2 LINE L1 4769 5584 -299 3 800 7416 75 6 2 chr13 28294039 28295020 -91989292 + L1Md_F2 LINE L1 5587 6571 -11 3 800 461 275 118 14 chr13 28295020 28295241 -91989071 - L1MD LINE L1 -3144 3002 2759 2 800 321 335 44 29 chr13 28296043 28296249 -91988063 - RMER15-int LTR ERVL -3398 1601 1393 3 800 948 117 0 0 chr13 28297629 28297774 -91986538 + (TTC)n Simple_repeat Simple_repeat 3 147 0 3 800 752 121 90 15 chr13 28297774 28297908 -91986404 - RLTR17 LTR ERVK -548 144 1 3 800 6288 191 50 60 chr13 28297908 28298005 -91986307 - RMER3D-int LTR ERVK 0 2842 2754 3 800 1168 58 0 0 chr13 28298005 28298143 -91986169 + B1_Mm SINE Alu 1 138 -9 3 800 180 0 0 0 chr13 28298143 28298163 -91986149 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 800 6288 191 50 60 chr13 28298163 28299910 -91984402 - RMER3D-int LTR ERVK -89 2753 1016 3 800 794 229 85 61 chr13 28299981 28300465 -91983847 - RMER3D-int LTR ERVK -1991 851 21 3 800 328 309 26 91 chr13 28300482 28300713 -91983599 - RLTR17 LTR ERVK 0 561 346 3 800 2547 182 14 37 chr13 28300692 28301133 -91983179 - RLTR17 LTR ERVK -16 676 236 3 800 1222 124 21 0 chr13 28301133 28301319 -91982993 - B2_Mm2 SINE B2 -4 191 2 3 800 2547 182 14 37 chr13 28301319 28301362 -91982950 - RLTR17 LTR ERVK -457 235 203 3 800 215 116 0 44 chr13 28301724 28301769 -91982543 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 800 299 320 30 46 chr13 28301868 28301999 -91982313 - B1F SINE Alu -20 129 1 3 800 486 0 0 0 chr13 28302942 28302996 -91981316 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 800 633 294 58 17 chr13 28302997 28303170 -91981142 - B3 SINE B2 -35 181 2 3 800 614 284 78 23 chr13 28304043 28304546 -91979766 - L1_Mur3 LINE L1 -1148 4995 4432 3 800 371 46 68 11 chr13 28304609 28304697 -91979615 + (TA)n Simple_repeat Simple_repeat 1 93 0 3 800 505 324 31 30 chr13 28304702 28305164 -91979148 - L1_Mur3 LINE L1 -1949 4194 3737 3 800 826 147 19 13 chr13 28305164 28305323 -91978989 - RLTR10 LTR ERVK -4 386 227 3 800 234 102 0 78 chr13 28305332 28305396 -91978916 - RLTR10 LTR ERVK -72 318 260 3 800 2506 44 0 6 chr13 28305406 28305726 -91978586 - RLTR10 LTR ERVK -72 318 1 3 800 8419 13 5 0 chr13 28305728 28306718 -91977594 - RLTR10-int LTR ERVK -3 1984 990 3 800 7507 40 7 1 chr13 28306797 28307741 -91976571 - RLTR10-int LTR ERVK -999 988 39 3 800 894 132 19 12 chr13 28307752 28307913 -91976399 - RLTR10 LTR ERVK -2 388 227 3 800 234 102 0 78 chr13 28307922 28307986 -91976326 - RLTR10 LTR ERVK -72 318 260 3 800 2506 44 0 6 chr13 28307996 28308316 -91975996 - RLTR10 LTR ERVK -72 318 1 3 800 294 319 31 25 chr13 28308344 28308540 -91975772 - L1_Mur3 LINE L1 -2417 3726 3530 3 800 257 288 164 33 chr13 28308601 28308845 -91975467 + L1MB5 LINE L1 5882 6157 -17 3 12 30851 86 6 7 chr13 28309127 28314299 -91970013 + L1Md_F2 LINE L1 423 5586 -297 3 801 7674 63 11 1 chr13 28314299 28315283 -91969029 + L1Md_F2 LINE L1 5587 6580 -2 3 801 837 117 0 0 chr13 28315537 28315665 -91968647 + (GAAA)n Simple_repeat Simple_repeat 1 128 0 3 801 505 332 10 35 chr13 28316690 28316893 -91967419 + RMER15-int LTR ERVL 4513 4710 -289 3 801 1617 176 14 78 chr13 28316893 28317239 -91967073 + ORR1A4 LTR MaLR 1 324 -5 3 801 21 36 0 0 chr13 28317327 28317355 -91966957 + AT_rich Low_complexity Low_complexity 1 28 0 3 801 342 0 0 0 chr13 28317576 28317614 -91966698 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 801 327 345 86 20 chr13 28317797 28317948 -91966364 + RMER15 LTR ERVL 337 497 -78 3 801 319 252 50 29 chr13 28318507 28318646 -91965666 + Lx9 LINE L1 7501 7642 -2 3 801 582 41 0 0 chr13 28318744 28318817 -91965495 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 801 21 57 0 0 chr13 28318890 28318925 -91965387 + AT_rich Low_complexity Low_complexity 1 35 0 3 801 332 314 40 60 chr13 28319212 28319412 -91964900 - B4A SINE B4 -14 278 83 3 801 30808 69 5 15 chr13 28320303 28322314 -91961998 - L1Md_F2 LINE L1 -4 6578 4570 3 801 2121 35 4 4 chr13 28322314 28322574 -91961738 + L1Md_F3 LINE L1 6323 6582 -2 3 801 30808 72 8 26 chr13 28322574 28325823 -91958489 - L1Md_F2 LINE L1 -1314 4569 1403 3 801 502 131 0 12 chr13 28325818 28325903 -91958409 - L1VL1 LINE L1 -6289 133 50 3 801 7080 148 65 5 chr13 28325899 28327340 -91956972 - L1_Mur2 LINE L1 -2224 3653 2127 3 801 1090 98 12 6 chr13 28327345 28327509 -91956803 - ORR1A2 LTR MaLR -162 165 1 3 801 1954 189 127 49 chr13 28327509 28328353 -91955959 - L1_Mur2 LINE L1 -4471 1406 485 3 801 546 290 29 14 chr13 28329461 28329601 -91954711 + RMER20B LTR ERVK 1 142 -485 3 801 874 262 110 57 chr13 28329615 28329951 -91954361 + RMER20B LTR ERVK 274 627 0 3 801 250 246 16 0 chr13 28330293 28330354 -91953958 + CT-rich Low_complexity Low_complexity 2 63 0 3 801 334 316 61 34 chr13 28330857 28331152 -91953160 + L1MA5A LINE L1 3481 3783 -2360 3 801 840 155 95 28 chr13 28331159 28331338 -91952974 + B2_Mm2 SINE B2 2 192 -3 3 801 1054 316 83 19 chr13 28331339 28332580 -91951732 + L1MA5A LINE L1 3779 5098 -1045 3 801 618 319 50 45 chr13 28332594 28333034 -91951278 + L1MA5A LINE L1 5491 5932 -365 3 801 4952 144 40 8 chr13 28333382 28334185 -91950127 - Lx LINE L1 -215 6439 5611 3 801 2267 181 75 21 chr13 28334189 28334720 -91949592 - RLTR31_Mm LTR ERVK -1 560 1 3 801 540 0 0 0 chr13 28334765 28334825 -91949487 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 801 6553 196 46 57 chr13 28334838 28335607 -91948705 - RMER3D-int LTR ERVK -51 2791 2050 3 801 1116 78 0 0 chr13 28335607 28335749 -91948563 + B1_Mus1 SINE Alu 1 142 -6 3 801 504 0 0 0 chr13 28335751 28335807 -91948505 + (TAAA)n Simple_repeat Simple_repeat 1 56 0 3 801 6553 196 46 57 chr13 28335807 28336805 -91947507 - RMER3D-int LTR ERVK -793 2049 1041 3 801 942 239 52 61 chr13 28336900 28337409 -91946903 - RMER3D-int LTR ERVK -1991 851 1 3 801 2173 197 63 22 chr13 28337409 28337948 -91946364 - RLTR31_Mm LTR ERVK 0 561 1 3 801 9621 162 15 3 chr13 28337948 28339680 -91944632 - L1_Mur2 LINE L1 -270 5607 3855 3 801 9352 91 51 12 chr13 28339681 28341845 -91942467 - L1VL4 LINE L1 -1128 2431 188 3 801 469 304 139 35 chr13 28341878 28342137 -91942175 + RMER15-int LTR ERVL 4317 4602 -397 3 801 23 54 0 0 chr13 28345034 28345071 -91939241 + AT_rich Low_complexity Low_complexity 1 37 0 3 801 202 221 29 14 chr13 28345579 28345648 -91938664 + A-rich Low_complexity Low_complexity 1 70 0 3 801 239 246 45 15 chr13 28345727 28345793 -91938519 - B1_Mur1 SINE Alu -2 147 80 3 801 270 289 86 19 chr13 28345871 28346033 -91938279 + L1M2 LINE L1 3492 3664 -2479 3 801 1727 201 48 191 chr13 28346094 28346696 -91937616 + RMER19C LTR ERVK 1 516 -95 3 801 940 202 0 38 chr13 28346692 28346763 -91937549 + MTD LTR MaLR 228 297 -122 3 801 5408 34 0 0 chr13 28346763 28347404 -91936908 - L1Md_T LINE L1 0 6582 5942 3 801 940 202 0 38 chr13 28347404 28347517 -91936795 + MTD LTR MaLR 298 405 -14 3 801 40 73 0 0 chr13 28347607 28347689 -91936623 + AT_rich Low_complexity Low_complexity 1 82 0 3 801 1558 219 162 15 chr13 28347696 28348092 -91936220 - Lx3C LINE L1 0 7058 6509 3 801 307 319 110 55 chr13 28348110 28348329 -91935983 + L1M5 LINE L1 5265 5495 -669 3 801 528 290 107 38 chr13 28348336 28348680 -91935632 + Lx7 LINE L1 5558 5928 -375 3 801 1788 169 102 38 chr13 28348794 28349200 -91935112 + RMER6B LTR ERVK 1 459 -2 3 801 885 297 47 16 chr13 28350004 28350455 -91933857 + L1M2 LINE L1 3210 3674 -2469 3 801 437 202 22 39 chr13 28350455 28350635 -91933677 + RMER17C LTR ERVK 95 271 -139 3 801 701 272 30 19 chr13 28350663 28350929 -91933383 + L1_Mur3 LINE L1 3652 3920 -1960 3 801 4576 42 3 0 chr13 28350932 28351505 -91932807 + MT-int LTR MaLR 524 1098 0 3 801 195 42 0 0 chr13 28351636 28351660 -91932652 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 801 1686 299 64 47 chr13 28351683 28352677 -91931635 + L1M2 LINE L1 3978 4988 -1155 3 801 422 278 67 16 chr13 28352759 28352953 -91931359 - L1M2 LINE L1 -3635 3210 3007 3 801 568 171 0 14 chr13 28353444 28353586 -91930726 + (TG)n Simple_repeat Simple_repeat 2 141 0 3 801 219 36 0 0 chr13 28353738 28353766 -91930546 + (CAGGC)n Simple_repeat Simple_repeat 5 32 0 3 801 499 305 78 51 chr13 28354015 28354653 -91929659 - L1M2 LINE L1 -3971 2608 2017 3 801 241 64 64 0 chr13 28356040 28356087 -91928225 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 3 801 203 316 13 0 chr13 28356900 28356979 -91927333 + A-rich Low_complexity Low_complexity 1 80 0 3 801 353 265 0 12 chr13 28357187 28357271 -91927041 - BC1_Mm scRNA scRNA -67 85 3 3 801 256 342 69 99 chr13 28357229 28357407 -91926905 - ZP3AR Satellite Satellite -21 191 5 3 801 197 108 27 0 chr13 28358124 28358161 -91926151 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 3 801 457 265 37 0 chr13 28358764 28358900 -91925412 + B1F SINE Alu 1 141 -8 3 801 4999 107 6 7 chr13 28358927 28359816 -91924496 - Lx3_Mus LINE L1 -956 6053 5172 3 801 6702 80 11 13 chr13 28359816 28360755 -91923557 + Lx3_Mus LINE L1 6073 7009 0 3 801 231 214 0 0 chr13 28360762 28360832 -91923480 + A-rich Low_complexity Low_complexity 1 70 0 3 801 34 0 0 0 chr13 28360918 28360952 -91923360 + AT_rich Low_complexity Low_complexity 1 34 0 3 801 303 273 127 21 chr13 28362522 28362664 -91921648 + Tigger16b DNA Tigger 152 308 -29 3 801 806 87 28 12 chr13 28363050 28363307 -91921005 + (TG)n Simple_repeat Simple_repeat 1 261 0 3 801 340 246 0 0 chr13 28363308 28363373 -91920939 - ID4_ SINE ID -13 70 6 3 801 228 289 91 13 chr13 28363473 28363550 -91920762 + L2a LINE L2 3280 3362 -64 3 801 464 309 97 72 chr13 28363626 28363957 -91920355 - ORR1E LTR MaLR -20 339 1 3 801 201 94 0 0 chr13 28364255 28364287 -91920025 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 3 801 372 217 54 26 chr13 28364595 28364748 -91919564 - MIR SINE MIR -34 228 73 3 801 1043 168 113 10 chr13 28364954 28365158 -91919154 + URR1A DNA MER1_type 1 225 -1 3 801 644 280 44 93 chr13 28365198 28365446 -91918866 + B4A SINE B4 32 267 -25 3 801 1663 234 113 39 chr13 28365441 28365935 -91918377 - RLTR17 LTR ERVK -74 618 88 3 801 294 29 0 0 chr13 28366015 28366050 -91918262 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 801 489 34 0 0 chr13 28366051 28366110 -91918202 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 3 801 243 350 56 31 chr13 28366214 28366376 -91917936 + L2a LINE L2 3261 3426 0 3 801 1259 102 48 0 chr13 28367004 28367190 -91917122 + B2_Mm2 SINE B2 1 195 0 3 801 186 133 0 0 chr13 28367191 28367221 -91917091 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 3 801 1131 66 0 0 chr13 28367235 28367372 -91916940 + B1_Mm SINE Alu 2 138 -9 3 801 282 29 0 0 chr13 28367372 28367407 -91916905 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 801 1670 258 122 29 chr13 28367523 28368049 -91916263 + RMER15 LTR ERVL 1 575 0 3 801 1104 232 31 131 chr13 28368477 28368898 -91915414 - MTE2a LTR MaLR 0 379 1 3 801 1624 232 96 17 chr13 28369076 28369536 -91914776 + RMER20A LTR ERVK 21 516 0 3 801 952 173 118 5 chr13 28370382 28370585 -91913727 - URR1A DNA MER1_type 0 226 1 3 801 581 273 21 28 chr13 28370738 28370881 -91913431 + B1F SINE Alu 1 142 -7 3 801 5084 55 5 3 chr13 28371367 28372011 -91912301 + L1_Mus1 LINE L1 5917 6561 -6 3 801 296 298 62 6 chr13 28372041 28372220 -91912092 + L1M2 LINE L1 5593 5781 -519 4 801 21 36 0 0 chr13 28372799 28372827 -91911485 + AT_rich Low_complexity Low_complexity 1 28 0 4 801 811 244 174 31 chr13 28373785 28374159 -91910153 - Arthur1 DNA Tip100 -25 3922 3509 4 801 369 0 0 0 chr13 28374159 28374200 -91910112 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 801 811 244 174 31 chr13 28374200 28374278 -91910034 - Arthur1 DNA Tip100 -439 3508 3407 4 801 321 305 95 0 chr13 28374493 28374598 -91909714 - B1F SINE Alu -29 120 6 4 801 1304 73 17 17 chr13 28374638 28374818 -91909494 + B2_Mm2 SINE B2 2 181 -14 4 801 412 220 50 50 chr13 28375138 28375277 -91909035 - MTEb LTR MaLR 0 379 241 4 801 374 335 50 22 chr13 28375554 28375832 -91908480 + L1M5 LINE L1 4085 4370 -1776 4 801 396 288 54 0 chr13 28375839 28375972 -91908340 + B1F SINE Alu 1 144 -5 4 801 1106 276 110 15 chr13 28375974 28376519 -91907793 + L1M5 LINE L1 4351 4947 -1199 4 801 3235 53 0 8 chr13 28376618 28377017 -91907295 + MTA_Mm LTR MaLR 1 396 0 4 801 21 36 0 0 chr13 28377052 28377080 -91907232 + AT_rich Low_complexity Low_complexity 1 28 0 4 801 21 71 0 0 chr13 28378205 28378247 -91906065 + AT_rich Low_complexity Low_complexity 1 42 0 4 801 32 57 0 0 chr13 28378445 28378498 -91905814 + AT_rich Low_complexity Low_complexity 1 53 0 4 801 357 285 92 8 chr13 28378573 28378704 -91905608 - RMER15 LTR ERVL -2 573 432 4 801 597 106 0 0 chr13 28378727 28378831 -91905481 + (TC)n Simple_repeat Simple_repeat 1 104 0 4 801 1573 281 99 20 chr13 28379131 28379724 -91904588 - RMER15-int LTR ERVL -201 4798 4159 4 801 779 316 28 4 chr13 28379794 28380042 -91904270 - RMER15-int LTR ERVL -2452 2547 2294 4 801 1068 73 0 0 chr13 28380110 28380246 -91904066 + B1_Mm SINE Alu 2 137 -10 4 801 216 0 0 0 chr13 28380246 28380270 -91904042 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 801 1221 308 55 62 chr13 28380320 28380904 -91903408 - RMER15-int LTR ERVL -2922 2077 1498 4 801 2840 283 31 57 chr13 28381395 28381675 -91902637 - RMER15-int LTR ERVL -3461 1538 1294 4 801 639 278 12 53 chr13 28381675 28381846 -91902466 - RSINE1 SINE B4 0 165 2 4 801 2840 283 31 57 chr13 28381846 28382495 -91901817 - RMER15-int LTR ERVL -3706 1293 633 4 801 210 37 0 0 chr13 28382496 28382523 -91901789 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 801 438 363 87 42 chr13 28382588 28383062 -91901250 - RMER15-int LTR ERVL -4500 499 5 4 801 447 267 102 7 chr13 28383093 28383240 -91901072 - RMER15 LTR ERVL -44 531 371 4 801 519 17 0 0 chr13 28384515 28384575 -91899737 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 801 691 279 124 30 chr13 28384579 28384908 -91899404 + RLTR11B LTR ERVK 7 388 -53 4 801 253 217 0 0 chr13 28384932 28384978 -91899334 - ID4 SINE ID -36 47 2 4 801 648 26 0 0 chr13 28385140 28385218 -91899094 + (TC)n Simple_repeat Simple_repeat 1 78 0 4 801 946 148 0 11 chr13 28385295 28385473 -91898839 + GA-rich Low_complexity Low_complexity 3 178 0 4 801 1191 99 0 0 chr13 28385488 28385660 -91898652 + (GGAGA)n Simple_repeat Simple_repeat 5 176 0 4 801 381 22 0 0 chr13 28388279 28388325 -91895987 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 801 285 314 79 71 chr13 28388329 28388456 -91895856 - RSINE1 SINE B4 -14 151 24 4 801 1111 203 9 22 chr13 28388616 28388843 -91895469 + URR1B DNA MER1_type 2 225 0 4 801 39 50 0 0 chr13 28389283 28389343 -91894969 + AT_rich Low_complexity Low_complexity 1 60 0 4 801 197 330 33 33 chr13 28389545 28389636 -91894676 - L2b LINE L2 -10 3365 3275 4 801 834 207 39 34 chr13 28390392 28390597 -91893715 + B3 SINE B2 1 206 -10 4 801 227 224 64 147 chr13 28390774 28390931 -91893381 - MTEa LTR MaLR 0 370 227 4 801 2539 77 63 11 chr13 28390940 28391320 -91892992 + RLTR10A LTR ERVK 5 404 -7 4 801 391 293 89 67 chr13 28391328 28391507 -91892805 - MTEa LTR MaLR -196 183 1 4 801 477 0 0 0 chr13 28391642 28391695 -91892617 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 4 801 4360 41 0 0 chr13 28392300 28392816 -91891496 + L1Md_T LINE L1 6067 6582 0 4 801 341 310 81 60 chr13 28392893 28393178 -91891134 + B4A SINE B4 2 292 0 4 801 180 0 0 0 chr13 28393226 28393246 -91891066 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 801 361 182 0 0 chr13 28393297 28393363 -91890949 - ORR1A1 LTR MaLR -239 107 42 4 801 195 162 0 0 chr13 28393520 28393557 -91890755 + T-rich Low_complexity Low_complexity 1 37 0 4 801 6944 63 1 8 chr13 28393559 28394488 -91889824 - L1_Mus1 LINE L1 0 6567 5645 4 801 23698 72 5 93 chr13 28394486 28396429 -91887883 - L1Md_F2 LINE L1 -1 6581 4649 4 801 216 0 0 0 chr13 28396429 28396453 -91887859 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 801 1577 131 48 0 chr13 28396454 28396706 -91887606 - RLTR27 LTR ERVK -45 264 1 4 801 23698 104 19 164 chr13 28396706 28401581 -91882731 - L1Md_F2 LINE L1 -1235 4647 480 4 801 239 266 0 12 chr13 28402346 28402426 -91881886 + L1MB3 LINE L1 5483 5561 -622 4 801 508 306 161 5 chr13 28402474 28402643 -91881669 + L1MB3 LINE L1 5647 5837 -346 4 801 1255 27 0 7 chr13 28402643 28402790 -91881522 - B1_Mm SINE Alu -1 146 1 4 801 508 306 161 5 chr13 28402790 28403050 -91881262 + L1MB3 LINE L1 5838 6143 -40 4 801 274 378 14 29 chr13 28403142 28403281 -91881031 - MIR SINE MIR -87 175 39 4 801 243 264 142 27 chr13 28404486 28404634 -91879678 + MER121 Unknown Unknown 47 211 -201 4 801 228 329 24 12 chr13 28405174 28405257 -91879055 - B4A SINE B4 -206 86 3 4 801 555 221 188 18 chr13 28407426 28407596 -91876716 + B3 SINE B2 1 199 -17 4 801 273 309 13 73 chr13 28407962 28408112 -91876200 + B1F SINE Alu 1 141 -8 4 801 396 324 80 57 chr13 28409305 28409567 -91874745 + LTR16A1 LTR ERVL 149 416 -40 4 801 312 368 20 20 chr13 28410628 28410775 -91873537 - MER5A DNA MER1_type -22 167 21 4 801 656 138 9 0 chr13 28411967 28412076 -91872236 + RLTR16 LTR ERVK 1 110 -395 4 801 1075 202 98 26 chr13 28412097 28412361 -91871951 + RLTR16 LTR ERVK 223 505 0 4 801 5165 56 16 0 chr13 28412771 28413413 -91870899 - L1_Mus1 LINE L1 0 6567 5916 4 801 834 304 17 30 chr13 28413838 28414075 -91870237 - B4A SINE B4 -56 236 3 4 801 844 296 80 19 chr13 28414446 28415070 -91869242 + L1_Mur3 LINE L1 97 675 -7053 4 801 2521 177 49 31 chr13 28415102 28415934 -91868378 + L1_Mur3 LINE L1 859 1684 -4196 4 801 1329 82 6 6 chr13 28415934 28416117 -91868195 + B2_Mm1a SINE B2 2 184 -9 4 801 2521 164 58 32 chr13 28416117 28416283 -91868029 + L1_Mur3 LINE L1 1685 1877 -4003 4 801 4770 133 4 12 chr13 28416283 28417035 -91867277 + Lx LINE L1 5908 6653 -1 4 801 3445 192 22 5 chr13 28417049 28417815 -91866497 + L1_Mur3 LINE L1 4329 5107 -773 4 801 3210 222 149 5 chr13 28417811 28418843 -91865469 + Lx6 LINE L1 5913 7115 -345 4 801 231 114 0 0 chr13 28418843 28418878 -91865434 + (TA)n Simple_repeat Simple_repeat 2 36 0 4 801 1077 225 169 11 chr13 28418878 28418950 -91865362 + Lx6 LINE L1 7116 7230 -230 4 801 198 329 26 13 chr13 28419337 28419414 -91864898 + MIR SINE MIR 58 135 -73 4 801 605 283 68 0 chr13 28419860 28420051 -91864261 - Tigger14a DNA MER2_type -60 264 61 4 801 6353 6 0 0 chr13 28420910 28421610 -91862702 - L1Md_T LINE L1 0 6582 5883 4 801 472 364 12 64 chr13 28423815 28423988 -91860324 + RSINE1 SINE B4 2 165 0 4 801 257 306 62 36 chr13 28424704 28424816 -91859496 + MER5A DNA MER1_type 20 134 -55 4 801 25 65 0 0 chr13 28424820 28424866 -91859446 + AT_rich Low_complexity Low_complexity 1 46 0 4 801 397 264 34 68 chr13 28424883 28425001 -91859311 - RSINE1 SINE B4 -35 130 17 4 801 806 206 19 11 chr13 28425256 28425432 -91858880 - B3 SINE B2 -8 185 1 4 801 3032 56 5 5 chr13 28425782 28426177 -91858135 + L1_Mus3 LINE L1 6244 6638 0 4 801 1022 279 58 1 chr13 28427354 28427589 -91856723 - MTE2a LTR MaLR -14 382 128 4 801 786 205 27 145 chr13 28427589 28427954 -91856358 - RLTRETN_Mm LTR ERVK 0 322 1 4 801 261 299 147 54 chr13 28427954 28427981 -91856331 - MTE2a LTR MaLR -267 129 102 4 801 354 115 0 0 chr13 28427982 28428034 -91856278 - ETnERV2-int LTR ERVK -26 7380 7329 4 801 675 223 92 43 chr13 28428034 28428372 -91855940 - RLTR13B1 LTR ERVK -365 537 128 4 801 7408 193 44 40 chr13 28428374 28431378 -91852934 - MMETn-int LTR ERVK -371 4473 2356 4 801 3368 162 59 33 chr13 28431601 28432459 -91851853 - MMETn-int LTR ERVK -3959 3447 2038 4 801 4295 186 15 98 chr13 28432466 28433577 -91850735 - MMETn-int LTR ERVK -3714 1130 116 4 801 195 42 0 0 chr13 28433577 28433601 -91850711 + (C)n Simple_repeat Simple_repeat 1 24 0 4 801 4295 186 15 98 chr13 28433601 28433720 -91850592 - MMETn-int LTR ERVK -4729 115 1 4 801 974 206 31 134 chr13 28433721 28434080 -91850232 - RLTRETN_Mm LTR ERVK 0 322 1 4 801 389 332 11 0 chr13 28434080 28434206 -91850106 - MTE2a LTR MaLR -250 129 1 4 801 3725 115 7 0 chr13 28435003 28435542 -91848770 + Lx3A LINE L1 6436 6978 -3 4 801 291 284 49 0 chr13 28435612 28435714 -91848598 + PB1D10 SINE Alu 1 107 -10 4 801 703 178 11 17 chr13 28436279 28436456 -91847856 + GA-rich Low_complexity Low_complexity 3 178 0 4 801 297 0 0 0 chr13 28437629 28437662 -91846650 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 801 735 291 81 25 chr13 28437684 28437920 -91846392 - B4A SINE B4 -43 249 1 4 801 22 70 0 0 chr13 28438699 28438742 -91845570 + AT_rich Low_complexity Low_complexity 1 43 0 4 801 303 93 0 0 chr13 28438934 28438977 -91845335 + (TTG)n Simple_repeat Simple_repeat 2 44 0 4 801 332 336 18 9 chr13 28439552 28439663 -91844649 + MER94 DNA AcHobo 22 133 -1 4 801 216 0 0 0 chr13 28439742 28439766 -91844546 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 4 801 411 21 0 0 chr13 28440157 28440205 -91844107 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 801 213 254 67 53 chr13 28440235 28440310 -91844002 - B1_Mus1 SINE Alu -41 107 32 4 801 577 342 55 0 chr13 28440244 28440425 -91843887 - B4A SINE B4 -101 191 1 4 801 266 244 60 12 chr13 28440665 28440748 -91843564 - MLT1A LTR MaLR -21 353 267 4 801 204 379 0 0 chr13 28440825 28440920 -91843392 + C-rich Low_complexity Low_complexity 6 100 0 4 801 180 0 0 0 chr13 28441248 28441268 -91843044 + (TGG)n Simple_repeat Simple_repeat 2 21 0 4 801 5759 63 41 1 chr13 28441704 28442463 -91841849 + Lx3_Mus LINE L1 6213 7001 -8 4 100 637 299 121 44 chr13 28442534 28442869 -91841443 - MTEb LTR MaLR -7 352 14 4 802 369 43 0 0 chr13 28443308 28443355 -91840957 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 802 1213 185 210 57 chr13 28443446 28443813 -91840499 + RMER6C LTR ERVK 1 423 -267 4 802 261 229 19 0 chr13 28443819 28443976 -91840336 + (AGTTG)n Simple_repeat Simple_repeat 3 162 0 4 802 232 173 53 0 chr13 28443984 28444059 -91840253 + (CAGTT)n Simple_repeat Simple_repeat 5 83 0 4 802 1075 214 55 64 chr13 28444070 28444491 -91839821 + RMER6C LTR ERVK 316 712 -8 4 802 489 321 86 0 chr13 28444513 28444653 -91839659 - B3A SINE B2 -45 153 2 4 802 278 306 68 55 chr13 28444677 28444833 -91839479 - RMER15-int LTR ERVL -129 4870 4713 4 802 2742 159 43 12 chr13 28444833 28445316 -91838996 + RLTR19 LTR ERVK 2 499 0 4 802 278 306 68 55 chr13 28445316 28445394 -91838918 - RMER15-int LTR ERVL -287 4712 4633 4 802 1014 67 27 0 chr13 28445604 28445753 -91838559 + L1Md_F2 LINE L1 6411 6563 -19 4 802 1481 229 12 48 chr13 28446034 28446447 -91837865 + Lx4B LINE L1 6657 7054 -4 5 802 406 368 0 0 chr13 28446997 28447103 -91837209 - RSINE1 SINE B4 -17 148 43 5 802 1818 66 23 11 chr13 28447346 28447606 -91836706 - L1Md_F2 LINE L1 -4 6578 6316 5 802 6659 38 2 1 chr13 28449683 28450519 -91833793 + L1Md_F2 LINE L1 5669 6505 -77 5 802 8945 50 4 4 chr13 28451061 28452949 -91831363 - L1Md_F2 LINE L1 0 6582 4693 5 802 30 27 0 0 chr13 28453089 28453126 -91831186 + AT_rich Low_complexity Low_complexity 1 37 0 5 802 21 36 0 0 chr13 28453731 28453759 -91830553 + AT_rich Low_complexity Low_complexity 1 28 0 5 802 265 328 71 61 chr13 28454622 28454820 -91829492 + B4A SINE B4 83 282 -10 5 802 24 77 0 0 chr13 28455298 28455350 -91828962 + AT_rich Low_complexity Low_complexity 1 52 0 5 802 452 143 0 0 chr13 28455377 28455461 -91828851 - Lx9 LINE L1 -60 7584 7501 5 802 268 308 119 18 chr13 28456017 28456126 -91828186 - RMER15 LTR ERVL -78 497 378 5 802 1789 168 9 70 chr13 28456700 28457045 -91827267 - ORR1A4 LTR MaLR -5 324 1 5 802 446 285 108 23 chr13 28457058 28457234 -91827078 - Lx8 LINE L1 -705 6768 6578 5 802 328 274 104 0 chr13 28458165 28458300 -91826012 + L1M2 LINE L1 3766 3914 -2229 5 802 736 293 54 30 chr13 28458363 28458736 -91825576 + L1M2 LINE L1 3532 3913 -2230 5 802 750 244 73 11 chr13 28459315 28459493 -91824819 + B3 SINE B2 5 193 -23 5 802 180 0 0 0 chr13 28459496 28459516 -91824796 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 802 324 252 27 36 chr13 28459538 28459649 -91824663 + L1MD LINE L1 2425 2534 -3612 5 802 344 293 194 46 chr13 28459724 28460053 -91824259 + L1MC LINE L1 2716 3093 -3053 5 802 321 336 31 31 chr13 28460466 28460595 -91823717 + B1F SINE Alu 1 129 -20 5 802 4077 149 28 61 chr13 28461487 28462337 -91821975 - L1_Mur2 LINE L1 -619 5258 4437 5 802 1191 159 9 0 chr13 28462329 28462549 -91821763 + L1_Mur1 LINE L1 4354 4575 -1311 5 802 1560 243 148 75 chr13 28462553 28463425 -91820887 - RMER17B LTR ERVK -22 936 1 5 802 285 259 24 24 chr13 28464294 28464377 -91819935 + CT-rich Low_complexity Low_complexity 2 84 0 5 802 352 279 9 19 chr13 28464976 28465082 -91819230 + PB1D10 SINE Alu 5 109 -8 5 802 577 165 33 50 chr13 28465385 28465506 -91818806 - PB1D9 SINE Alu -1 119 1 5 802 23000 157 10 19 chr13 28465716 28471299 -91813013 - Lx2A1 LINE L1 -6 7002 1475 5 802 1663 88 17 0 chr13 28471299 28471537 -91812775 - L1_Mus3 LINE L1 -3 6635 6394 5 802 23000 181 126 42 chr13 28471537 28472420 -91811892 - Lx2A1 LINE L1 -4412 1474 585 5 802 306 233 138 0 chr13 28473104 28473220 -91811092 - LTR48 LTR ERV1 -47 740 609 5 802 1118 274 58 25 chr13 28473286 28473448 -91810864 + MTEa LTR MaLR 1 170 -209 5 802 189 0 0 0 chr13 28473448 28473469 -91810843 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 5 802 1118 274 58 25 chr13 28473469 28473631 -91810681 + MTEa LTR MaLR 171 335 -44 5 802 403 348 42 6 chr13 28473634 28473799 -91810513 - LTR48 LTR ERV1 -230 557 387 5 802 476 287 0 17 chr13 28474244 28474361 -91809951 - PB1D10 SINE Alu 0 117 3 5 802 269 26 26 0 chr13 28474526 28474564 -91809748 + (TTTTTG)n Simple_repeat Simple_repeat 6 44 0 5 802 1620 26 5 10 chr13 28474684 28474878 -91809434 - B2_Mm1t SINE B2 0 193 1 5 802 180 0 0 0 chr13 28475574 28475594 -91808718 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5 802 383 68 0 17 chr13 28475781 28475841 -91808471 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 5 802 268 183 75 11 chr13 28475841 28475935 -91808377 - Lx3A LINE L1 -20 6989 6890 5 802 5712 109 24 10 chr13 28475929 28476856 -91807456 - Lx3A LINE L1 -250 6731 5792 5 802 4714 132 41 10 chr13 28476855 28477804 -91806508 - L1Md_F LINE L1 -5521 1203 238 5 802 2514 94 5 0 chr13 28477818 28478220 -91806092 - L1_Mur1 LINE L1 -3800 2086 1683 5 802 860 105 0 7 chr13 28479609 28479753 -91804559 + (TG)n Simple_repeat Simple_repeat 2 144 0 5 802 322 336 40 33 chr13 28479766 28479917 -91804395 - B4 SINE B4 -129 163 12 5 802 253 348 33 0 chr13 28479942 28480034 -91804278 - PB1D7 SINE Alu -7 113 19 5 802 3013 215 49 21 chr13 28480589 28481306 -91803006 - RMER19A LTR ERVK 0 737 1 5 802 750 262 103 26 chr13 28481404 28481706 -91802606 + MER2 DNA MER2_type 21 345 0 5 802 5437 231 35 56 chr13 28481849 28484140 -91800172 - Lx5 LINE L1 0 7050 4822 5 802 900 238 301 9 chr13 28484754 28485080 -91799232 - MTC LTR MaLR 0 421 1 5 802 2127 308 63 20 chr13 28485090 28485805 -91798507 + Lx8 LINE L1 6543 7292 -181 5 802 1661 250 28 114 chr13 28485805 28486473 -91797839 + RMER19C LTR ERVK 1 611 0 5 802 2127 308 63 20 chr13 28486473 28486649 -91797663 + Lx8 LINE L1 7293 7472 -1 5 802 543 358 85 62 chr13 28487396 28487748 -91796564 + MTEb LTR MaLR 20 379 0 5 802 6741 51 66 3 chr13 28487937 28488864 -91795448 - L1Md_F2 LINE L1 0 6582 5598 5 802 301 111 0 0 chr13 28488860 28488905 -91795407 + L1Md_F2 LINE L1 5569 5613 -270 5 802 1822 179 0 20 chr13 28489461 28489783 -91794529 + Lx4B LINE L1 6446 6760 -298 5 802 183 42 0 0 chr13 28489783 28489807 -91794505 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 802 1822 270 48 51 chr13 28489807 28490009 -91794303 + Lx4B LINE L1 6755 6969 -31 5 802 234 0 0 0 chr13 28490009 28490035 -91794277 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 5 802 217 109 36 0 chr13 28490058 28490113 -91794199 + (TTTTTG)n Simple_repeat Simple_repeat 6 62 0 5 802 1047 90 21 0 chr13 28490113 28490258 -91794054 - B1_Mus1 SINE Alu 0 148 1 5 802 22 0 0 0 chr13 28490258 28490280 -91794032 + AT_rich Low_complexity Low_complexity 1 22 0 5 802 183 162 0 0 chr13 28490420 28490457 -91793855 + CT-rich Low_complexity Low_complexity 1 37 0 5 802 259 360 32 115 chr13 28490681 28490838 -91793474 + MTEa LTR MaLR 5 148 -231 5 802 500 344 73 24 chr13 28491450 28491697 -91792615 + MLT1C LTR MaLR 201 459 -8 5 802 240 100 0 0 chr13 28492162 28492202 -91792110 + (A)n Simple_repeat Simple_repeat 1 40 0 5 802 192 77 0 0 chr13 28493160 28493186 -91791126 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 802 266 51 26 0 chr13 28493439 28493478 -91790834 + (GAAAA)n Simple_repeat Simple_repeat 3 42 0 5 802 890 170 0 6 chr13 28493478 28493650 -91790662 + GA-rich Low_complexity Low_complexity 2 172 0 5 802 24 0 0 0 chr13 28494092 28494116 -91790196 + AT_rich Low_complexity Low_complexity 1 24 0 5 802 333 265 163 26 chr13 28494326 28494516 -91789796 - L1M5 LINE L1 -2659 3487 3272 5 802 278 231 15 0 chr13 28494921 28494986 -91789326 - Charlie5 DNA MER1_type -1 2623 2558 5 802 1918 270 60 23 chr13 28494991 28495655 -91788657 - Lx6 LINE L1 -26 7434 6746 5 802 4117 164 15 25 chr13 28495666 28496481 -91787831 + L1_Mur3 LINE L1 4940 5746 -134 5 802 1186 301 100 11 chr13 28496500 28496950 -91787362 + Lx6 LINE L1 6947 7436 -24 5 802 830 148 18 36 chr13 28496951 28497119 -91787193 + Lx5 LINE L1 5741 5905 -1145 5 802 623 307 23 23 chr13 28497148 28497368 -91786944 + ID_B1 SINE B4 2 221 -3 5 802 1168 243 70 38 chr13 28498013 28498471 -91785841 + Lx9 LINE L1 5660 6102 -1542 5 802 451 188 42 0 chr13 28498558 28498654 -91785658 + Lx9 LINE L1 6376 6475 -1169 5 802 1233 101 0 0 chr13 28498845 28499024 -91785288 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 5 802 501 17 0 0 chr13 28499124 28499182 -91785130 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 802 846 231 156 0 chr13 28499185 28499505 -91784807 - Lx9 LINE L1 -12 7632 7263 5 802 726 246 306 0 chr13 28499498 28499779 -91784533 + Lx9 LINE L1 6318 6684 -960 5 802 1228 163 9 14 chr13 28499781 28499999 -91784313 + RLTR20B3 LTR ERVK 1 217 -360 5 802 1975 142 74 3 chr13 28500000 28500248 -91784064 + RLTR20B3 LTR ERVK 216 470 -107 1 802 324 0 0 0 chr13 28500248 28500284 -91784028 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 802 1975 142 74 3 chr13 28500284 28500373 -91783939 + RLTR20B3 LTR ERVK 471 576 -1 1 802 203 152 0 0 chr13 28500806 28500839 -91783473 + GA-rich Low_complexity Low_complexity 4 36 0 3 802 297 0 0 0 chr13 28500843 28500876 -91783436 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 802 297 0 0 0 chr13 28502478 28502511 -91781801 + (T)n Simple_repeat Simple_repeat 1 33 0 5 802 186 43 0 0 chr13 28502719 28502742 -91781570 + (A)n Simple_repeat Simple_repeat 1 23 0 6 802 1032 252 15 49 chr13 28503607 28503874 -91780438 + B4A SINE B4 31 288 -4 7 802 399 355 13 39 chr13 28503901 28504130 -91780182 + Tigger7 DNA MER2_type 2259 2481 -10 8 802 637 290 17 11 chr13 28504245 28504423 -91779889 - B3A SINE B2 -18 180 2 9 802 327 167 0 0 chr13 28504695 28504761 -91779551 + T-rich Low_complexity Low_complexity 1 66 0 1 802 1176 121 71 0 chr13 28504804 28504986 -91779326 + B2_Mm2 SINE B2 1 195 0 1 802 231 114 0 0 chr13 28504986 28505021 -91779291 + (A)n Simple_repeat Simple_repeat 1 35 0 1 802 642 296 12 6 chr13 28505100 28505263 -91779049 + MER58A DNA MER1_type 15 178 -46 1 802 196 30 61 0 chr13 28507378 28507411 -91776901 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1 802 198 0 0 0 chr13 28507548 28507570 -91776742 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 802 186 43 0 0 chr13 28507570 28507592 -91776720 + (TA)n Simple_repeat Simple_repeat 2 24 0 1 802 387 0 0 0 chr13 28509815 28509858 -91774454 + (TC)n Simple_repeat Simple_repeat 1 43 0 1 802 401 36 0 18 chr13 28510759 28510815 -91773497 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 802 204 182 0 0 chr13 28511596 28511640 -91772672 + A-rich Low_complexity Low_complexity 1 44 0 1 802 517 271 57 0 chr13 28514460 28514582 -91769730 - B1F1 SINE Alu -8 141 13 2 802 1570 211 90 23 chr13 28514617 28514962 -91769350 + MTD LTR MaLR 22 389 -30 2 802 888 251 155 0 chr13 28514962 28515233 -91769079 - Lx2B LINE L1 -3 6997 6685 2 802 234 0 0 0 chr13 28515254 28515280 -91769032 + (A)n Simple_repeat Simple_repeat 1 26 0 2 802 369 0 0 0 chr13 28516116 28516157 -91768155 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 802 217 361 8 30 chr13 28516946 28517080 -91767232 - L3 LINE CR1 -4 4485 4355 2 802 689 297 129 40 chr13 28517363 28517689 -91766623 + MTEa LTR MaLR 6 360 -19 2 802 233 322 68 46 chr13 28518151 28518314 -91765998 + MIR3 SINE MIR 6 171 -105 2 802 207 0 0 0 chr13 28518754 28518777 -91765535 + (T)n Simple_repeat Simple_repeat 1 23 0 2 802 423 274 105 38 chr13 28520178 28520311 -91764001 - B3A SINE B2 -56 142 1 2 802 23 0 0 0 chr13 28520387 28520410 -91763902 + AT_rich Low_complexity Low_complexity 1 23 0 3 802 220 371 0 0 chr13 28520505 28520567 -91763745 - ID4_ SINE ID -3 80 19 3 802 383 269 35 27 chr13 28520591 28520731 -91763581 - B1F SINE Alu -9 140 1 3 802 5216 82 23 37 chr13 28520794 28521526 -91762786 + L1_Mus3 LINE L1 5917 6638 0 3 802 554 122 31 14 chr13 28521526 28521658 -91762654 + B1_Mm SINE Alu 2 133 -16 3 802 225 179 0 25 chr13 28521890 28521930 -91762382 + B3 SINE B2 3 41 -175 3 802 687 156 129 30 chr13 28521977 28522109 -91762203 - B1_Mm SINE Alu -1 146 2 3 802 885 241 36 81 chr13 28522134 28522355 -91761957 + B4 SINE B4 81 291 -1 3 802 312 48 0 0 chr13 28522355 28522397 -91761915 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 802 253 324 130 39 chr13 28524022 28524253 -91760059 - L1MC3 LINE L1 -573 7212 6961 3 802 221 344 60 67 chr13 28524507 28524533 -91759779 - B4A SINE B4 -64 228 96 4 802 403 231 37 37 chr13 28524533 28524641 -91759671 - PB1D7 SINE Alu -2 118 11 4 802 338 262 0 116 chr13 28524765 28524903 -91759409 + ID_B1 SINE B4 81 202 -22 4 802 3314 203 54 10 chr13 28525079 28525787 -91758525 + Lx7 LINE L1 6727 7465 -231 4 802 284 70 0 23 chr13 28525812 28525856 -91758456 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 802 1162 77 0 0 chr13 28525859 28526002 -91758310 - B1_Mus1 SINE Alu -5 143 1 4 802 321 118 0 0 chr13 28526166 28526217 -91758095 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 802 498 221 32 1 chr13 28526230 28526359 -91757953 - L1MA4A LINE L1 -373 5930 5777 4 802 205 333 0 65 chr13 28526913 28526959 -91757353 - L2a LINE L2 0 3426 3386 4 802 1717 186 189 3 chr13 28526959 28527314 -91756998 + MTC LTR MaLR 1 421 0 4 802 205 333 0 65 chr13 28527314 28527360 -91756952 - L2a LINE L2 -41 3385 3340 4 802 24 0 0 0 chr13 28527375 28527399 -91756913 + AT_rich Low_complexity Low_complexity 1 24 0 5 802 7995 98 5 10 chr13 28527400 28528850 -91755462 - L1_Mus4 LINE L1 -4 6632 5185 5 802 3212 165 7 4 chr13 28528824 28529378 -91754934 + L1_Mus4 LINE L1 4640 5195 -688 5 802 409 303 126 87 chr13 28529543 28529829 -91754483 + MER77 LTR ERVL 122 418 -189 5 802 766 80 26 9 chr13 28529843 28529956 -91754356 + MTA_Mm LTR MaLR 1 115 -281 5 802 6362 7 0 0 chr13 28529956 28530655 -91753657 + L1Md_A LINE L1 4888 5586 -297 5 802 9479 10 0 0 chr13 28530655 28531650 -91752662 + L1Md_A LINE L1 5587 6581 -1 5 802 2483 45 7 0 chr13 28531650 28531959 -91752353 + MTA_Mm LTR MaLR 86 396 0 5 802 3750 134 23 24 chr13 28531972 28532586 -91751726 + RMER6D LTR ERVK 1 613 -107 5 802 1495 129 143 73 chr13 28532590 28532890 -91751422 - ORR1A4 LTR MaLR -8 321 1 5 802 371 140 0 0 chr13 28532917 28532974 -91751338 + RMER6D LTR ERVK 664 720 0 5 802 425 252 56 0 chr13 28533012 28533119 -91751193 + MER77 LTR ERVL 463 575 -32 5 802 939 294 67 52 chr13 28533185 28533515 -91750797 - MTD LTR MaLR -3 416 82 5 802 2250 132 58 19 chr13 28534173 28534551 -91749761 + ORR1B1 LTR MaLR 1 393 -1 5 802 720 237 100 21 chr13 28536036 28536076 -91748236 - B3 SINE B2 -11 205 155 5 802 273 29 0 0 chr13 28536076 28536110 -91748202 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 6 802 423 0 0 0 chr13 28536110 28536157 -91748155 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 802 720 237 100 21 chr13 28536157 28536305 -91748007 - B3 SINE B2 -62 154 2 5 802 1098 243 0 5 chr13 28536436 28536647 -91747665 + B3 SINE B2 1 210 -6 6 802 423 0 0 0 chr13 28537407 28537454 -91746858 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 802 247 336 24 79 chr13 28538327 28538453 -91745859 - PB1D9 SINE Alu 0 120 2 6 802 404 331 105 23 chr13 28538739 28538872 -91745440 - RSINE1 SINE B4 -11 154 11 6 802 896 182 14 0 chr13 28538918 28539066 -91745246 + B1_Mur4 SINE Alu 1 150 0 6 802 223 255 0 0 chr13 28539136 28539183 -91745129 + ID4 SINE ID 9 55 -28 6 802 989 230 47 0 chr13 28541034 28541225 -91743087 + B3 SINE B2 11 210 -6 6 802 210 260 20 0 chr13 28541253 28541303 -91743009 + GA-rich Low_complexity Low_complexity 5 55 0 6 802 501 226 0 0 chr13 28541498 28541591 -91742721 + ID_B1 SINE B4 122 214 -10 7 802 387 0 0 0 chr13 28541953 28541996 -91742316 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 802 219 333 0 0 chr13 28542181 28542235 -91742077 + L2b LINE L2 3305 3358 -17 7 802 402 218 39 154 chr13 28542305 28542435 -91741877 + B4 SINE B4 1 115 -177 7 802 351 0 0 0 chr13 28542518 28542557 -91741755 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 802 405 0 0 0 chr13 28543688 28543733 -91740579 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 802 710 348 68 8 chr13 28543733 28543982 -91740330 - B4 SINE B4 -23 269 6 7 802 3437 171 143 91 chr13 28544249 28545099 -91739213 + RMER19B LTR ERVK 1 895 -7 7 802 248 283 67 0 chr13 28547057 28547117 -91737195 - Charlie12 DNA MER1_type -2804 69 6 7 802 574 279 70 38 chr13 28548345 28548531 -91735781 + B3A SINE B2 7 198 0 7 802 1326 225 38 63 chr13 28548842 28549207 -91735105 + Lx5 LINE L1 6672 7027 -23 8 802 234 143 0 0 chr13 28550339 28550388 -91733924 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 8 802 623 356 32 21 chr13 28550416 28550697 -91733615 - B4A SINE B4 -4 288 5 8 802 1204 149 108 10 chr13 28550920 28551124 -91733188 - URR1A DNA MER1_type -2 224 1 8 802 411 302 142 61 chr13 28552242 28552602 -91731710 + Lx8 LINE L1 7080 7468 -5 8 802 507 208 341 16 chr13 28553819 28554083 -91730229 - Lx6 LINE L1 0 7460 7112 8 802 596 277 119 52 chr13 28554305 28554345 -91729967 - B3 SINE B2 -5 211 180 8 802 3326 65 5 10 chr13 28554345 28554747 -91729565 - MTB LTR MaLR 0 400 1 8 802 596 277 119 52 chr13 28554747 28554900 -91729412 - B3 SINE B2 -37 179 5 8 802 531 296 65 13 chr13 28554938 28555092 -91729220 - B3A SINE B2 -30 168 7 8 802 1066 161 165 5 chr13 28555362 28555556 -91728756 - URR1B DNA MER1_type 0 225 1 8 802 674 197 27 81 chr13 28556363 28556512 -91727800 - B1_Mur1 SINE Alu -2 147 7 9 802 264 248 29 169 chr13 28556392 28556528 -91727784 - MT2B LTR ERVL -332 269 153 9 802 432 0 0 0 chr13 28556683 28556731 -91727581 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 802 868 285 69 40 chr13 28557682 28557956 -91726356 + B4A SINE B4 5 286 -6 9 802 493 321 6 30 chr13 28558402 28558569 -91725743 + RSINE1 SINE B4 1 163 -2 9 802 308 308 66 0 chr13 28558743 28558834 -91725478 + B3A SINE B2 5 101 -97 9 802 326 269 0 37 chr13 28559595 28559676 -91724636 + B4A SINE B4 16 93 -199 9 802 484 272 115 55 chr13 28559685 28559868 -91724444 + B3A SINE B2 5 198 0 9 802 218 56 28 0 chr13 28560033 28560069 -91724243 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 9 802 256 314 0 11 chr13 28560119 28560206 -91724106 + (CATA)n Simple_repeat Simple_repeat 4 89 0 9 802 191 337 92 11 chr13 28560342 28560429 -91723883 + L2 LINE L2 1953 2046 -1373 1 802 355 310 62 7 chr13 28560582 28560728 -91723584 + MIR SINE MIR 3 156 -106 1 802 310 274 84 0 chr13 28561091 28561186 -91723126 - PB1D10 SINE Alu -6 111 9 1 802 42208 5 0 1 chr13 28561204 28567989 -91716323 - L1Md_A LINE L1 0 6582 1 1 802 3477 203 92 24 chr13 28568163 28568981 -91715331 + RMER19B LTR ERVK 1 836 -66 1 802 6390 136 20 15 chr13 28568981 28569977 -91714335 + Lx2 LINE L1 5997 6997 0 1 802 586 272 51 34 chr13 28570060 28570296 -91714016 - L1MA4 LINE L1 -386 5914 5675 1 802 442 283 187 0 chr13 28570630 28570796 -91713516 - B3 SINE B2 -9 207 11 1 802 366 23 0 0 chr13 28570824 28570867 -91713445 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 802 357 24 0 0 chr13 28570867 28570908 -91713404 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 802 24 53 0 0 chr13 28570937 28570975 -91713337 + AT_rich Low_complexity Low_complexity 1 38 0 1 802 360 133 0 0 chr13 28572027 28572087 -91712225 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 802 23 54 0 0 chr13 28572114 28572151 -91712161 + AT_rich Low_complexity Low_complexity 1 37 0 1 802 24 0 0 0 chr13 28572732 28572756 -91711556 + AT_rich Low_complexity Low_complexity 1 24 0 1 803 182 37 37 0 chr13 28573958 28573985 -91710327 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 803 293 297 126 54 chr13 28574418 28574696 -91709616 + L1ME3 LINE L1 5859 6156 -6 1 803 1187 245 126 0 chr13 28575946 28576264 -91708048 + Lx8 LINE L1 6478 6835 -638 1 803 433 243 164 14 chr13 28576265 28576411 -91707901 + Lx8 LINE L1 6963 7130 -343 1 803 327 185 69 69 chr13 28576642 28576729 -91707583 + L1MEf LINE L1 120 206 -5994 1 803 823 186 191 33 chr13 28576747 28576907 -91707405 - B3 SINE B2 0 216 26 1 803 4090 70 25 52 chr13 28576907 28577462 -91706850 - L1Md_F2 LINE L1 -12 6570 6031 1 803 823 186 191 33 chr13 28577462 28577484 -91706828 - B3 SINE B2 -191 25 5 1 803 618 71 0 0 chr13 28577739 28577823 -91706489 + (TAGA)n Simple_repeat Simple_repeat 1 84 0 1 803 249 159 0 0 chr13 28577848 28577892 -91706420 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 1 803 622 357 131 26 chr13 28578189 28578966 -91705346 + L1MEf LINE L1 783 1641 -4559 1 803 259 239 103 35 chr13 28579056 28579143 -91705169 - ORR1E LTR MaLR -280 94 3 1 803 22 0 0 0 chr13 28579378 28579400 -91704912 + AT_rich Low_complexity Low_complexity 1 22 0 1 803 477 0 0 0 chr13 28579401 28579454 -91704858 + (GA)n Simple_repeat Simple_repeat 1 53 0 1 803 215 280 0 0 chr13 28579589 28579639 -91704673 + (CAG)n Simple_repeat Simple_repeat 1 50 0 1 803 255 250 49 12 chr13 28579736 28579817 -91704495 - MTE2b LTR MaLR -295 84 1 1 803 211 128 26 0 chr13 28579852 28579891 -91704421 + CT-rich Low_complexity Low_complexity 1 40 0 1 803 560 316 101 5 chr13 28580447 28580635 -91703677 + B4A SINE B4 6 211 -81 1 803 443 18 18 0 chr13 28580635 28580691 -91703621 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 803 468 319 119 43 chr13 28580695 28581434 -91702878 - L1M4 LINE L1 -410 5754 4953 1 803 275 287 146 68 chr13 28581565 28582297 -91702015 - L1M4 LINE L1 -1422 4724 3936 1 803 601 299 50 15 chr13 28582306 28582506 -91701806 + ID_B1 SINE B4 13 219 -5 1 803 231 278 170 18 chr13 28583023 28583038 -91701274 + L1M3 LINE L1 5268 5282 -1030 1 803 282 95 0 0 chr13 28583038 28583080 -91701232 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 803 485 294 131 58 chr13 28583080 28583568 -91700744 + L1M3 LINE L1 5283 5792 -388 1 803 622 252 53 0 chr13 28583884 28584015 -91700297 - B1_Mur1 SINE Alu -9 140 3 1 803 302 333 191 0 chr13 28585854 28586037 -91698275 + MIR SINE MIR 7 224 -38 1 803 332 343 9 0 chr13 28586856 28586961 -91697351 - RSINE1 SINE B4 -57 108 3 1 803 678 246 48 16 chr13 28587409 28587595 -91696717 - ID_B1 SINE B4 -32 192 1 1 803 466 310 99 42 chr13 28588042 28588254 -91696058 + MER58A DNA MER1_type 1 224 0 1 803 490 306 70 62 chr13 28588402 28588600 -91695712 + B3A SINE B2 14 216 0 1 803 917 118 328 6 chr13 28588734 28588905 -91695407 + URR1A DNA MER1_type 1 226 0 1 803 181 344 132 8 chr13 28589019 28589148 -91695164 + L2a LINE L2 3241 3385 -41 1 803 1094 203 43 5 chr13 28589871 28590079 -91694233 + B3 SINE B2 1 216 0 1 803 504 0 0 0 chr13 28590672 28590728 -91693584 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 1 803 934 230 49 24 chr13 28591107 28591312 -91693000 - B3 SINE B2 -5 211 2 1 803 308 182 15 0 chr13 28591765 28591831 -91692481 + Lx9 LINE L1 7570 7636 -8 1 803 512 306 58 63 chr13 28591967 28592190 -91692122 + Tigger5 DNA MER2_type 17 238 -2168 1 803 283 342 0 88 chr13 28592192 28592317 -91691995 + Tigger5 DNA MER2_type 2293 2406 0 1 803 355 246 0 147 chr13 28592634 28592777 -91691535 + RSINE1 SINE B4 44 165 0 1 803 191 61 0 29 chr13 28593900 28593934 -91690378 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 1 803 1021 255 155 9 chr13 28595127 28595456 -91688856 - MTEb LTR MaLR 0 379 3 1 803 180 0 0 0 chr13 28595474 28595494 -91688818 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 803 313 208 40 96 chr13 28595617 28595747 -91688565 + PB1D10 SINE Alu 2 120 0 1 803 368 274 51 32 chr13 28596956 28597114 -91687198 + L1MC3 LINE L1 7159 7319 -466 1 803 669 312 38 50 chr13 28597125 28597519 -91686793 + Lx7 LINE L1 7065 7471 -2 1 803 399 309 100 31 chr13 28597592 28597852 -91686460 + L1MC3 LINE L1 7363 7640 -145 1 803 603 259 7 41 chr13 28598025 28598170 -91686142 - B1_Mus2 SINE Alu 0 147 8 1 803 777 318 51 42 chr13 28598428 28598963 -91685349 + L1MA4 LINE L1 5467 5988 -1656 1 803 666 295 11 11 chr13 28599255 28599440 -91684872 + ID_B1 SINE B4 5 189 -35 1 803 279 0 0 0 chr13 28599451 28599482 -91684830 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 803 236 255 0 0 chr13 28601191 28601238 -91683074 + polypurine Low_complexity Low_complexity 4 50 0 1 803 529 300 6 42 chr13 28601501 28601668 -91682644 + RSINE1 SINE B4 1 161 -4 1 803 686 174 32 35 chr13 28602221 28602400 -91681912 - B3 SINE B2 -9 186 9 1 803 3900 100 15 2 chr13 28603117 28603666 -91680646 + L1_Mus1 LINE L1 6034 6701 -357 1 803 265 325 2 0 chr13 28604052 28604126 -91680186 - ID2 SINE ID -62 90 16 1 803 262 262 34 45 chr13 28604160 28604248 -91680064 - PB1D7 SINE Alu 0 120 34 1 803 297 51 0 0 chr13 28604757 28604796 -91679516 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 803 453 19 0 0 chr13 28604974 28605028 -91679284 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 803 480 279 48 48 chr13 28606242 28606408 -91677904 + B3 SINE B2 51 216 0 1 803 242 259 0 17 chr13 28606422 28606481 -91677831 + CT-rich Low_complexity Low_complexity 5 62 0 1 803 544 254 92 36 chr13 28606481 28606677 -91677635 - ID_B1 SINE B4 -16 208 2 1 803 191 103 0 25 chr13 28607075 28607115 -91677197 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 803 757 285 38 31 chr13 28607314 28607586 -91676726 + ZP3AR Satellite Satellite 1 274 0 1 803 274 291 24 37 chr13 28607586 28607668 -91676644 + ID4_ SINE ID 1 81 -2 1 803 704 179 0 6 chr13 28608829 28608986 -91675326 + GA-rich Low_complexity Low_complexity 3 158 0 1 803 213 143 51 25 chr13 28608981 28609060 -91675252 + (CAGAGA)n Simple_repeat Simple_repeat 2 82 0 1 803 263 343 114 0 chr13 28609972 28610112 -91674200 + MER20 DNA MER1_type 63 218 -1 1 803 869 290 76 22 chr13 28610212 28610487 -91673825 - B4A SINE B4 -2 290 1 1 803 513 320 63 89 chr13 28610541 28610911 -91673401 - ORR1E LTR MaLR -9 361 1 1 803 462 101 0 0 chr13 28611165 28611234 -91673078 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 803 577 197 7 86 chr13 28611292 28611431 -91672881 - B4A SINE B4 -44 248 121 1 803 252 77 0 0 chr13 28611552 28611591 -91672721 + (A)n Simple_repeat Simple_repeat 1 39 0 1 803 234 0 0 0 chr13 28611949 28611975 -91672337 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 803 659 250 64 18 chr13 28613366 28613537 -91670775 + B3A SINE B2 2 180 -18 1 803 276 293 50 89 chr13 28613672 28613773 -91670539 + B4A SINE B4 1 97 -195 1 803 324 70 0 0 chr13 28613775 28613818 -91670494 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 803 185 229 83 0 chr13 28614524 28614572 -91669740 + L2c LINE L2 3331 3382 -5 1 803 378 0 0 0 chr13 28615095 28615137 -91669175 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 803 510 316 49 35 chr13 28616065 28616291 -91668021 + B4 SINE B4 8 236 -56 1 803 473 338 50 6 chr13 28616363 28616524 -91667788 - Tigger5 DNA MER2_type -2195 211 44 1 803 403 236 42 59 chr13 28617066 28617199 -91667113 - MTEa LTR MaLR -9 370 180 1 803 372 282 49 84 chr13 28617206 28617349 -91666963 + B4 SINE B4 131 268 -24 1 803 387 113 0 0 chr13 28617354 28617425 -91666887 + (CAGA)n Simple_repeat Simple_repeat 4 74 0 1 803 396 0 0 0 chr13 28617462 28617506 -91666806 + (TTTTG)n Simple_repeat Simple_repeat 4 47 0 1 803 384 327 0 9 chr13 28618709 28618817 -91665495 - PB1D10 SINE Alu -2 115 9 1 803 319 316 0 20 chr13 28618729 28618829 -91665483 - ID_B1 SINE B4 -48 176 79 1 803 398 272 68 81 chr13 28620077 28620225 -91664087 + B4 SINE B4 53 198 -94 1 803 468 198 0 114 chr13 28620096 28620227 -91664085 + MT2B LTR ERVL 150 265 -336 1 803 760 132 17 17 chr13 28620118 28620234 -91664078 + B1_Mus1 SINE Alu 6 121 -27 1 803 243 88 0 0 chr13 28620234 28620268 -91664044 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 803 414 0 0 0 chr13 28620798 28620844 -91663468 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 803 186 327 194 25 chr13 28621104 28621264 -91663048 - MIRb SINE MIR -28 240 54 1 803 435 253 39 33 chr13 28621482 28621659 -91662653 + Lx8 LINE L1 5704 5914 -1782 2 803 462 318 17 80 chr13 28621945 28622160 -91662152 + B3A SINE B2 5 215 -1 2 803 2703 299 92 24 chr13 28622172 28623161 -91661151 + Lx8 LINE L1 6219 7274 -199 2 803 687 253 115 52 chr13 28624614 28624902 -91659410 + MER33 DNA MER1_type 12 317 -7 2 803 198 103 0 0 chr13 28625303 28625332 -91658980 + (GGAA)n Simple_repeat Simple_repeat 3 31 0 2 803 598 263 98 140 chr13 28625431 28626002 -91658310 + L1M3 LINE L1 3519 4065 -2075 2 803 243 274 58 35 chr13 28626023 28626110 -91658202 + PB1D7 SINE Alu 31 119 -1 2 803 9029 211 62 40 chr13 28626227 28627586 -91656726 + L1_Mur3 LINE L1 55 1433 -4447 2 803 180 0 0 0 chr13 28627586 28627606 -91656706 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 803 9029 159 117 74 chr13 28627606 28628327 -91655985 + L1_Mur3 LINE L1 1434 2054 -3826 2 803 378 0 0 0 chr13 28628327 28628369 -91655943 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 803 9029 159 117 74 chr13 28628369 28629800 -91654512 + L1_Mur3 LINE L1 2055 3683 -2197 2 803 7948 201 60 67 chr13 28629778 28631067 -91653245 + Lx7 LINE L1 5702 7022 -674 2 803 1758 107 11 96 chr13 28631067 28631406 -91652906 + L1Md_F2 LINE L1 6308 6582 0 2 803 7948 201 60 67 chr13 28631406 28632124 -91652188 + Lx7 LINE L1 7023 7694 -2 2 803 774 272 162 27 chr13 28632133 28632609 -91651703 + L1M3 LINE L1 4158 4697 -1443 2 803 349 308 106 65 chr13 28632631 28632695 -91651617 + B4A SINE B4 2 63 -229 2 803 1986 163 80 0 chr13 28632695 28633045 -91651267 + ORR1C1 LTR MaLR 1 378 0 2 803 1949 151 21 31 chr13 28633047 28633374 -91650938 + ORR1A2 LTR MaLR 2 325 -2 2 803 349 308 106 65 chr13 28633374 28633476 -91650836 + B4A SINE B4 64 178 -114 2 803 1020 266 75 14 chr13 28633492 28633818 -91650494 - ORR1E LTR MaLR -8 371 5 2 803 631 322 80 22 chr13 28633819 28634232 -91650080 + L1M3 LINE L1 4834 5270 -876 2 803 595 280 27 32 chr13 28634338 28634506 -91649806 + B3A SINE B2 34 202 -14 2 803 470 220 109 36 chr13 28634536 28634729 -91649583 + L1MB3 LINE L1 5911 6117 -66 2 803 260 291 0 0 chr13 28635644 28635699 -91648613 + ID4 SINE ID 2 56 -27 2 803 225 65 0 0 chr13 28636242 28636273 -91648039 + (C)n Simple_repeat Simple_repeat 1 31 0 2 803 345 189 91 0 chr13 28638005 28638116 -91646196 - MER44B DNA MER2_type -96 454 334 2 803 410 275 64 0 chr13 28638420 28638529 -91645783 + MTEa LTR MaLR 60 175 -204 2 803 267 279 95 70 chr13 28638424 28638582 -91645730 + MLT2B5 LTR ERVL 88 249 -352 2 803 428 295 74 101 chr13 28639873 28640194 -91644118 + ORR1E LTR MaLR 23 341 -18 2 803 249 159 0 0 chr13 28641135 28641179 -91643133 + CT-rich Low_complexity Low_complexity 2 45 0 2 803 376 355 11 51 chr13 28641179 28641357 -91642955 - B4A SINE B4 -118 174 4 2 803 1929 102 75 53 chr13 28642024 28642230 -91642082 + Lx2 LINE L1 6671 6866 -131 2 803 186 43 0 0 chr13 28642230 28642253 -91642059 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 2 803 1929 102 75 53 chr13 28642253 28642366 -91641946 + Lx2 LINE L1 6867 6997 0 2 803 402 248 9 47 chr13 28642398 28642504 -91641808 + PB1 SINE Alu 22 123 -4 2 803 845 310 8 39 chr13 28642517 28642772 -91641540 + MTEa LTR MaLR 1 247 -132 2 803 381 58 0 0 chr13 28642861 28642913 -91641399 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 803 543 31 0 0 chr13 28642914 28642979 -91641333 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 803 261 309 73 0 chr13 28643142 28643210 -91641102 + ID4_ SINE ID 2 74 -9 2 803 333 0 0 0 chr13 28645089 28645126 -91639186 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 803 564 56 0 0 chr13 28645126 28645197 -91639115 + (GA)n Simple_repeat Simple_repeat 2 73 0 2 803 353 267 56 28 chr13 28647581 28647689 -91636623 - PB1D10 SINE Alu -1 116 6 2 803 21 0 0 0 chr13 28647903 28647924 -91636388 + AT_rich Low_complexity Low_complexity 1 21 0 2 803 668 312 0 0 chr13 28648013 28648170 -91636142 + RSINE1 SINE B4 1 157 -8 2 803 28 48 0 0 chr13 28648189 28648231 -91636081 + AT_rich Low_complexity Low_complexity 1 42 0 2 803 260 277 126 19 chr13 28648374 28648477 -91635835 + MIRc SINE MIR 86 199 -69 2 803 180 111 0 0 chr13 28648750 28648777 -91635535 + (A)n Simple_repeat Simple_repeat 1 27 0 2 803 418 288 88 62 chr13 28648946 28649304 -91635008 - ORR1E LTR MaLR -12 367 1 2 803 214 278 73 65 chr13 28649542 28649665 -91634647 - L2c LINE L2 -12 3375 3252 2 803 1118 50 28 35 chr13 28649942 28650087 -91634225 - B1_Mus1 SINE Alu -2 146 3 2 803 4404 95 1 4 chr13 28650109 28650842 -91633470 - L1_Mus1 LINE L1 -570 5997 5267 2 803 4715 66 3 12 chr13 28650842 28651410 -91632902 + L1_Mus1 LINE L1 6005 6567 0 2 803 737 262 38 14 chr13 28653024 28653233 -91631079 + ID_B1 SINE B4 10 223 -1 2 803 315 0 0 0 chr13 28653320 28653355 -91630957 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2 803 243 125 0 0 chr13 28653410 28653450 -91630862 + (TCC)n Simple_repeat Simple_repeat 3 42 0 2 803 308 219 137 59 chr13 28653760 28653862 -91630450 + MTEb LTR MaLR 1 110 -269 2 803 341 310 9 9 chr13 28654131 28654245 -91630067 + GA-rich Low_complexity Low_complexity 2 115 0 2 803 275 214 0 14 chr13 28654780 28654851 -91629461 + GA-rich Low_complexity Low_complexity 3 72 0 2 803 200 380 74 28 chr13 28655389 28655419 -91628893 - MIRb SINE MIR -67 201 170 2 803 480 18 0 0 chr13 28655419 28655476 -91628836 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 803 236 370 33 19 chr13 28655476 28655621 -91628691 - MIR SINE MIR -99 169 19 2 803 989 290 80 11 chr13 28656140 28656516 -91627796 - Lx8 LINE L1 -906 6567 6166 2 803 2449 279 81 24 chr13 28656598 28657443 -91626869 + Lx8 LINE L1 6581 7473 0 2 803 485 71 0 14 chr13 28658283 28658354 -91625958 + (TCC)n Simple_repeat Simple_repeat 1 70 0 2 803 242 270 0 16 chr13 28659104 28659168 -91625144 + B3 SINE B2 148 210 -6 2 803 790 278 28 28 chr13 28659223 28659434 -91624878 + ID_B1 SINE B4 5 215 -9 2 803 270 0 0 0 chr13 28659440 28659470 -91624842 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 803 1434 263 82 62 chr13 28660078 28660564 -91623748 + RCHARR1 DNA MER1_type 2 497 -477 2 803 588 280 49 7 chr13 28660564 28660708 -91623604 + B3A SINE B2 2 151 -47 2 803 477 0 0 0 chr13 28660711 28660764 -91623548 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 803 950 260 84 124 chr13 28660850 28661114 -91623198 + RCHARR1 DNA MER1_type 483 739 -235 2 803 597 185 279 25 chr13 28661114 28661275 -91623037 - B3 SINE B2 -14 202 1 2 803 950 260 84 124 chr13 28661275 28661462 -91622850 + RCHARR1 DNA MER1_type 740 916 -58 2 803 209 302 68 59 chr13 28662604 28662739 -91621573 + MIR SINE MIR 30 173 -103 2 803 198 103 0 0 chr13 28664578 28664607 -91619705 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 803 401 81 16 0 chr13 28664828 28664890 -91619422 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 803 23 54 0 0 chr13 28665641 28665678 -91618634 + AT_rich Low_complexity Low_complexity 1 37 0 2 803 26 0 0 0 chr13 28666003 28666029 -91618283 + AT_rich Low_complexity Low_complexity 1 26 0 2 803 623 348 67 11 chr13 28666030 28666300 -91618012 - MER2 DNA MER2_type -59 286 2 2 803 400 234 121 75 chr13 28668100 28668299 -91616013 + B3 SINE B2 1 208 -8 2 803 316 132 29 14 chr13 28668377 28668446 -91615866 + (TAGA)n Simple_repeat Simple_repeat 3 72 0 2 803 229 271 50 50 chr13 28668541 28668642 -91615670 + B4 SINE B4 192 292 0 2 803 285 51 0 0 chr13 28668661 28668700 -91615612 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 803 252 77 0 0 chr13 28668701 28668740 -91615572 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 2 803 363 106 0 0 chr13 28668777 28668843 -91615469 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 803 662 190 94 7 chr13 28668880 28669018 -91615294 - B1_Mur4 SINE Alu 0 150 1 2 803 1345 229 42 46 chr13 28669167 28669584 -91614728 - MTD LTR MaLR -12 407 1 2 803 435 252 29 36 chr13 28670021 28670161 -91614151 - B1_Mur1 SINE Alu -1 148 10 2 803 1111 249 12 27 chr13 28670214 28670549 -91613763 - L1M5 LINE L1 -3094 3052 2723 2 803 3649 172 11 2 chr13 28671439 28672068 -91612244 - Lx3B LINE L1 0 6973 6339 2 803 401 295 0 2 chr13 28672319 28672427 -91611885 + B1F SINE Alu 2 108 -12 2 803 1185 75 0 0 chr13 28672804 28672951 -91611361 - B1_Mus2 SINE Alu 0 147 1 2 803 289 337 0 21 chr13 28673346 28673443 -91610869 + RSINE1 SINE B4 2 96 -69 2 803 510 17 0 0 chr13 28673510 28673569 -91610743 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 803 409 190 0 37 chr13 28674572 28674654 -91609658 - B1F1 SINE Alu -1 148 70 2 803 387 0 0 0 chr13 28674712 28674755 -91609557 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 803 709 294 35 0 chr13 28674826 28675027 -91609285 - ID_B1 SINE B4 -16 208 1 2 803 379 234 171 8 chr13 28676036 28676165 -91608147 - RSINE1 SINE B4 -13 152 3 2 803 213 65 0 0 chr13 28676179 28676210 -91608102 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 803 488 293 39 44 chr13 28677007 28677189 -91607123 + ORR1D1 LTR MaLR 1 181 -193 2 803 189 0 0 0 chr13 28677189 28677210 -91607102 + (TC)n Simple_repeat Simple_repeat 2 22 0 2 803 339 44 0 0 chr13 28677209 28677254 -91607058 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 803 423 0 0 0 chr13 28677253 28677300 -91607012 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 803 300 53 0 0 chr13 28677300 28677338 -91606974 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 803 351 222 80 36 chr13 28677375 28677487 -91606825 + ORR1D1 LTR MaLR 252 370 -4 2 803 270 0 0 0 chr13 28679324 28679354 -91604958 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 2 803 729 274 101 5 chr13 28679394 28679592 -91604720 + ID_B1 SINE B4 8 224 0 2 803 406 284 29 0 chr13 28680160 28680262 -91604050 + B1F SINE Alu 13 117 -32 2 803 383 0 21 0 chr13 28680372 28680419 -91603893 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 803 302 348 85 82 chr13 28680456 28680738 -91603574 - B4A SINE B4 -8 284 2 2 803 22 0 0 0 chr13 28680765 28680787 -91603525 + AT_rich Low_complexity Low_complexity 1 22 0 2 803 305 252 0 10 chr13 28680910 28681014 -91603298 + GA-rich Low_complexity Low_complexity 3 105 0 2 803 219 167 0 77 chr13 28681646 28681711 -91602601 + (TATAA)n Simple_repeat Simple_repeat 5 64 0 3 803 257 342 52 36 chr13 28681905 28682099 -91602213 + MER3 DNA MER1_type 7 203 -6 3 803 344 211 89 19 chr13 28682497 28682618 -91601694 + MTEa LTR MaLR 238 369 -10 3 803 236 304 38 0 chr13 28683157 28683236 -91601076 + MIRb SINE MIR 91 172 -96 3 803 22 0 0 0 chr13 28684115 28684137 -91600175 + AT_rich Low_complexity Low_complexity 1 22 0 3 803 27 0 0 0 chr13 28684271 28684298 -91600014 + AT_rich Low_complexity Low_complexity 1 27 0 3 803 847 246 50 104 chr13 28686164 28686540 -91597772 - ORR1E LTR MaLR 0 359 4 3 803 21 0 0 0 chr13 28686908 28686929 -91597383 + AT_rich Low_complexity Low_complexity 1 21 0 3 803 1162 286 40 17 chr13 28687163 28687511 -91596801 + MTE2a LTR MaLR 19 374 -5 3 803 483 285 0 0 chr13 28687655 28687778 -91596534 + ID_B1 SINE B4 92 214 -10 3 803 246 32 0 0 chr13 28687778 28687809 -91596503 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 803 429 294 108 27 chr13 28688951 28689210 -91595102 + RMER21B LTR ERV1 288 567 -275 3 803 715 315 13 13 chr13 28689265 28689503 -91594809 + B4A SINE B4 53 290 -2 3 803 342 0 0 0 chr13 28689511 28689549 -91594763 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 803 333 0 0 0 chr13 28689549 28689585 -91594727 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 803 227 170 21 0 chr13 28690085 28690132 -91594180 - MLT1A1 LTR MaLR -11 397 350 3 803 234 0 0 0 chr13 28690139 28690165 -91594147 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 803 589 135 81 0 chr13 28690553 28690664 -91593648 + B1_Mus2 SINE Alu 12 131 -16 3 803 234 128 0 0 chr13 28690668 28690707 -91593605 + (CATA)n Simple_repeat Simple_repeat 2 40 0 3 803 32 67 0 0 chr13 28690805 28690865 -91593447 + AT_rich Low_complexity Low_complexity 1 60 0 3 803 425 244 80 100 chr13 28691323 28691473 -91592839 + B4A SINE B4 1 147 -145 3 803 189 0 0 0 chr13 28691563 28691584 -91592728 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 803 287 265 165 29 chr13 28692098 28692304 -91592008 + L1ME5 LINE L1 5745 5978 -216 3 803 448 256 8 0 chr13 28694484 28694601 -91589711 + ID_B1 SINE B4 99 216 -8 3 803 234 364 45 83 chr13 28694630 28694786 -91589526 + ID_B1 SINE B4 20 169 -55 3 803 22 0 0 0 chr13 28694808 28694830 -91589482 + AT_rich Low_complexity Low_complexity 1 22 0 3 803 354 288 34 0 chr13 28694933 28695051 -91589261 + B1F2 SINE Alu 28 149 0 3 803 282 132 0 0 chr13 28695223 28695276 -91589036 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 803 321 273 99 35 chr13 28696713 28696914 -91587398 + L1MA7 LINE L1 5718 5931 -360 3 803 444 99 0 0 chr13 28696924 28696995 -91587317 + (CA)n Simple_repeat Simple_repeat 1 71 0 3 803 1237 37 0 0 chr13 28697426 28697590 -91586722 + B2_Mm1t SINE B2 30 193 0 3 803 204 352 90 30 chr13 28697706 28697873 -91586439 - L2c LINE L2 -82 3305 3129 3 803 809 289 102 12 chr13 28698023 28698196 -91586116 + B4 SINE B4 13 199 -93 3 803 746 149 327 0 chr13 28698196 28698364 -91585948 + URR1B DNA MER1_type 3 225 0 3 803 809 289 102 12 chr13 28698364 28698446 -91585866 + B4 SINE B4 200 290 -2 3 803 353 296 126 63 chr13 28698460 28698965 -91585347 + L1MB7 LINE L1 5571 6130 -54 3 803 272 208 50 82 chr13 28698981 28699061 -91585251 + ID4_ SINE ID 12 86 -66 3 803 245 309 0 24 chr13 28699206 28699289 -91585023 + B4 SINE B4 1 81 -211 3 803 217 333 107 34 chr13 28699253 28699402 -91584910 + B3 SINE B2 46 205 -11 3 803 242 89 44 0 chr13 28699409 28699454 -91584858 + (CATA)n Simple_repeat Simple_repeat 2 48 0 3 803 274 288 0 0 chr13 28700191 28700264 -91584048 + ID2 SINE ID 1 73 -10 3 803 270 0 0 0 chr13 28700716 28700746 -91583566 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 803 351 247 30 20 chr13 28700932 28701031 -91583281 + PB1D10 SINE Alu 18 117 0 3 803 2491 134 21 63 chr13 28701447 28701958 -91582354 + RLTR28 LTR ERVL 22 511 -13 3 803 226 291 78 0 chr13 28702706 28702809 -91581503 - L1M2 LINE L1 -1317 4826 4716 3 803 211 266 0 15 chr13 28702809 28702874 -91581438 - B1_Mus2 SINE Alu -83 64 1 3 803 520 303 115 30 chr13 28702963 28703293 -91581019 + MLT1A0 LTR MaLR 2 359 -6 3 803 527 0 16 0 chr13 28703611 28703674 -91580638 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 804 1022 225 19 5 chr13 28705147 28705357 -91578955 + B3 SINE B2 1 213 -3 3 804 724 256 75 21 chr13 28705459 28705739 -91578573 - Charlie1a DNA MER1_type -208 1247 953 3 804 22 35 0 0 chr13 28705814 28705843 -91578469 + AT_rich Low_complexity Low_complexity 1 29 0 3 804 715 181 20 29 chr13 28705846 28706034 -91578278 + B3 SINE B2 9 186 -9 3 804 956 102 7 0 chr13 28706685 28706832 -91577480 + (GA)n Simple_repeat Simple_repeat 1 148 0 3 804 225 178 0 0 chr13 28708299 28708344 -91575968 + (CATG)n Simple_repeat Simple_repeat 4 48 0 3 804 927 282 21 28 chr13 28708377 28708665 -91575647 - B4 SINE B4 0 292 7 3 804 323 340 28 57 chr13 28709706 28709918 -91574394 + Lx8 LINE L1 7043 7248 -225 3 804 363 342 14 0 chr13 28710045 28710191 -91574121 + RMER15 LTR ERVL 421 568 -7 3 804 451 306 46 46 chr13 28710942 28711137 -91573175 + L1MEg LINE L1 171 365 -5719 3 804 538 285 117 40 chr13 28711199 28711626 -91572686 + L1MEg LINE L1 488 947 -5137 3 804 645 279 0 35 chr13 28711722 28711893 -91572419 - RSINE1 SINE B4 0 165 1 3 804 370 305 56 11 chr13 28711931 28712110 -91572202 + L1MEg LINE L1 1040 1226 -4858 3 804 599 237 37 0 chr13 28712125 28712260 -91572052 + B1_Mur3 SINE Alu 1 140 -9 3 804 312 27 0 0 chr13 28712469 28712506 -91571806 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 804 4438 24 0 0 chr13 28712557 28713050 -91571262 + MT2_Mm LTR ERVL 1 493 0 3 804 10203 9 18 0 chr13 28713050 28714874 -91569438 + MERVL-int LTR ERVL 1 1857 -3628 3 804 5000 26 2 0 chr13 28714864 28715432 -91568880 + MERVL-int LTR ERVL 4792 5360 -125 3 804 362 167 46 35 chr13 28715432 28715519 -91568793 + ORR1A3-int LTR MaLR 553 640 -1323 3 804 321 0 0 0 chr13 28715519 28715557 -91568755 + MERVL-int LTR ERVL 5448 5485 0 3 804 4424 26 0 0 chr13 28715557 28716050 -91568262 + MT2_Mm LTR ERVL 1 493 0 3 804 185 119 24 0 chr13 28716195 28716237 -91568075 + (CAAAAA)n Simple_repeat Simple_repeat 1 43 0 3 804 275 326 10 0 chr13 28716343 28716441 -91567871 + RSINE1 SINE B4 20 118 -47 3 804 21 0 0 0 chr13 28716581 28716602 -91567710 + AT_rich Low_complexity Low_complexity 1 21 0 3 804 773 168 103 6 chr13 28717104 28717278 -91567034 + B2_Mm2 SINE B2 1 191 -4 3 804 490 298 210 4 chr13 28717683 28717918 -91566394 - B4A SINE B4 -2 290 7 3 804 195 345 34 17 chr13 28718091 28718209 -91566103 - MIRc SINE MIR -103 165 46 3 804 251 352 39 23 chr13 28718800 28718928 -91565384 - B4A SINE B4 -47 245 116 3 804 333 0 0 0 chr13 28718930 28718967 -91565345 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 804 212 340 0 0 chr13 28718971 28719021 -91565291 - B4A SINE B4 -215 77 28 3 804 333 0 0 0 chr13 28719067 28719104 -91565208 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 804 431 300 38 8 chr13 28719116 28719247 -91565065 - RSINE1 SINE B4 -15 150 16 3 804 266 297 54 108 chr13 28719511 28719879 -91564433 - MTEa LTR MaLR -1 369 3 3 804 537 294 59 26 chr13 28720296 28720584 -91563728 + B4 SINE B4 9 279 -13 3 804 333 0 0 0 chr13 28722116 28722153 -91562159 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 3 804 261 0 0 0 chr13 28722647 28722676 -91561636 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 804 360 245 96 20 chr13 28722682 28722828 -91561484 - MLT1A0 LTR MaLR -29 379 198 3 804 959 286 17 24 chr13 28723020 28723314 -91560998 + B4A SINE B4 1 292 0 3 804 300 212 244 24 chr13 28723394 28723409 -91560903 + ID_B1 SINE B4 79 154 -138 3 804 444 226 10 19 chr13 28723409 28723513 -91560799 + PB1D10 SINE Alu 14 116 -1 3 804 300 212 244 24 chr13 28723513 28723528 -91560784 + ID_B1 SINE B4 155 246 -46 3 804 585 129 0 0 chr13 28723530 28723623 -91560689 + (GAA)n Simple_repeat Simple_repeat 3 95 0 3 804 1005 113 0 0 chr13 28723636 28723787 -91560525 + B2_Mm2 SINE B2 3 153 -42 3 804 288 0 0 0 chr13 28723787 28723819 -91560493 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 804 398 53 18 0 chr13 28723901 28723958 -91560354 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 804 250 348 94 31 chr13 28723975 28724135 -91560177 - MER58A DNA MER1_type -17 207 38 3 804 431 250 147 0 chr13 28724574 28724710 -91559602 + B3A SINE B2 2 157 -41 3 804 194 91 30 0 chr13 28724715 28724748 -91559564 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 804 570 170 9 0 chr13 28724799 28724911 -91559401 + B1_Mus2 SINE Alu 34 146 -1 3 804 1182 74 0 0 chr13 28726466 28726614 -91557698 + B1_Mus1 SINE Alu 1 148 0 3 804 462 257 0 0 chr13 28726739 28726914 -91557398 + (CATA)n Simple_repeat Simple_repeat 4 178 0 3 804 204 224 58 23 chr13 28726932 28727019 -91557293 + (CAGA)n Simple_repeat Simple_repeat 2 91 0 3 804 222 105 0 0 chr13 28727019 28727057 -91557255 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 804 265 327 97 51 chr13 28727882 28728369 -91555943 + L1MC5 LINE L1 7338 7846 -115 3 804 251 299 0 15 chr13 28728647 28728715 -91555597 + GA-rich Low_complexity Low_complexity 2 68 0 3 804 247 239 27 27 chr13 28728901 28729013 -91555299 + (TAA)n Simple_repeat Simple_repeat 3 114 0 3 804 485 260 32 24 chr13 28729195 28729321 -91554991 + B1F SINE Alu 17 143 -6 3 804 337 289 190 0 chr13 28729551 28729672 -91554640 + ID_B1 SINE B4 81 224 0 3 804 198 103 0 0 chr13 28729672 28729701 -91554611 + (GAAAA)n Simple_repeat Simple_repeat 1 29 0 3 804 868 153 27 20 chr13 28729755 28729902 -91554410 + B1_Mur3 SINE Alu 2 149 0 3 804 204 67 0 0 chr13 28729921 28729951 -91554361 + (A)n Simple_repeat Simple_repeat 1 30 0 3 804 268 257 25 40 chr13 28730190 28730309 -91554003 + RSINE1 SINE B4 3 119 -173 4 804 212 245 37 19 chr13 28730398 28730452 -91553860 + RSINE1 SINE B4 67 121 -44 4 804 268 159 167 22 chr13 28730492 28730582 -91553730 + Lx4B LINE L1 6956 7058 0 4 804 1106 140 10 15 chr13 28730671 28730867 -91553445 + B2_Mm2 SINE B2 1 195 0 4 804 189 74 0 0 chr13 28731425 28731452 -91552860 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 804 289 333 14 13 chr13 28731504 28731665 -91552647 + MIR SINE MIR 104 268 0 4 804 514 266 0 0 chr13 28732475 28732584 -91551728 - PB1D7 SINE Alu -11 109 1 4 804 1885 118 38 20 chr13 28732684 28733029 -91551283 - MTB_Mm LTR MaLR -56 351 1 4 804 1228 165 4 22 chr13 28733379 28733608 -91550704 - URR1B DNA MER1_type 0 225 1 4 804 623 286 15 35 chr13 28733614 28733813 -91550499 - RMER30 DNA MER1_type -1 201 7 4 804 321 255 117 9 chr13 28734262 28734373 -91549939 + ORR1E LTR MaLR 18 140 -219 4 804 384 59 0 0 chr13 28734406 28734457 -91549855 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 804 254 143 0 58 chr13 28734457 28734509 -91549803 - B3A SINE B2 -146 52 4 4 804 262 314 49 54 chr13 28735807 28736166 -91548146 - ORR1E LTR MaLR -7 372 15 4 804 630 292 48 34 chr13 28736434 28736459 -91547853 - B4 SINE B4 0 292 270 4 804 360 0 0 0 chr13 28736459 28736499 -91547813 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 804 630 292 48 34 chr13 28736499 28736682 -91547630 - B4 SINE B4 -23 269 81 4 804 299 316 63 0 chr13 28737040 28737135 -91547177 + LTR33B LTR ERVL 26 126 -377 4 804 432 37 0 0 chr13 28738348 28738402 -91545910 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 804 758 265 93 7 chr13 28738487 28738776 -91545536 + L1MD2 LINE L1 5291 5604 -755 4 804 244 320 111 87 chr13 28738780 28739331 -91544981 + L1MD2 LINE L1 5796 6359 0 4 804 1494 44 39 0 chr13 28739489 28739671 -91544641 + B2_Mm1a SINE B2 1 189 -4 4 804 393 228 15 3 chr13 28740338 28740457 -91543855 - B3 SINE B2 -71 124 2 4 804 2756 94 22 15 chr13 28740517 28740927 -91543385 + L1_Mus3 LINE L1 6222 6634 -4 4 804 432 0 0 0 chr13 28740958 28741006 -91543306 + (TAA)n Simple_repeat Simple_repeat 2 49 0 4 804 317 304 23 53 chr13 28741007 28741139 -91543173 - Lx8 LINE L1 -243 7230 7103 4 804 524 278 97 11 chr13 28741237 28741412 -91542900 - Lx8 LINE L1 -475 6998 6809 4 804 234 116 0 0 chr13 28741932 28741975 -91542337 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 804 441 0 0 0 chr13 28742171 28742220 -91542092 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 4 804 223 367 139 0 chr13 28742220 28742378 -91541934 - L2c LINE L2 0 3387 3208 4 804 345 301 44 32 chr13 28742984 28743142 -91541170 + RSINE1 SINE B4 2 161 -4 4 804 318 26 0 0 chr13 28743574 28743613 -91540699 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 804 225 0 0 0 chr13 28744126 28744151 -91540161 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 4 804 2875 271 146 22 chr13 28744927 28745928 -91538384 - Lx8 LINE L1 -37 7436 6331 4 804 336 102 0 0 chr13 28745928 28745977 -91538335 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 804 2875 271 146 22 chr13 28745977 28746078 -91538234 - Lx8 LINE L1 -1143 6330 6197 4 804 198 0 0 0 chr13 28746085 28746107 -91538205 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 804 359 125 14 0 chr13 28747122 28747194 -91537118 + (GA)n Simple_repeat Simple_repeat 2 74 0 4 804 873 261 0 0 chr13 28747615 28747803 -91536509 + B3 SINE B2 2 189 -27 4 804 447 19 0 0 chr13 28747810 28747862 -91536450 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 804 270 81 0 0 chr13 28748169 28748206 -91536106 + (CAA)n Simple_repeat Simple_repeat 3 39 0 4 804 572 197 21 25 chr13 28748230 28748372 -91535940 + B1_Mur3 SINE Alu 3 147 -2 4 804 302 200 15 0 chr13 28748398 28748463 -91535849 + ID4_ SINE ID 2 67 -16 4 804 225 329 25 76 chr13 28749449 28749528 -91534784 + ID4_ SINE ID 2 76 -7 4 804 280 291 44 55 chr13 28749483 28749584 -91534728 + B4A SINE B4 33 132 -160 4 804 486 0 0 0 chr13 28749659 28749713 -91534599 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 804 484 262 0 16 chr13 28749875 28749999 -91534313 + B1F SINE Alu 27 148 -1 4 804 912 44 0 0 chr13 28750007 28750120 -91534192 + (TC)n Simple_repeat Simple_repeat 2 114 0 4 804 450 36 0 0 chr13 28750120 28750175 -91534137 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 804 441 290 63 37 chr13 28750281 28750471 -91533841 + MER115 DNA Tip100 499 693 0 4 804 300 53 0 0 chr13 28750595 28750633 -91533679 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 4 804 258 143 0 58 chr13 28751755 28751807 -91532505 - MIRc SINE MIR -112 156 108 4 804 387 302 0 32 chr13 28751905 28752028 -91532284 - PB1D7 SINE Alu 0 120 2 4 804 321 268 0 12 chr13 28752206 28752289 -91532023 + ID_B1 SINE B4 143 224 0 4 804 369 333 21 28 chr13 28752328 28752473 -91531839 + B1F1 SINE Alu 5 148 -1 4 804 269 333 62 0 chr13 28754020 28754116 -91530196 - PB1 SINE Alu -20 107 6 4 804 198 0 0 0 chr13 28754392 28754414 -91529898 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 804 189 0 0 0 chr13 28755251 28755272 -91529040 + (A)n Simple_repeat Simple_repeat 1 21 0 4 804 1253 246 63 35 chr13 28756330 28756696 -91527616 + MTE2b LTR MaLR 4 379 0 4 804 349 206 134 0 chr13 28757898 28757995 -91526317 + RSINE1 SINE B4 17 126 -39 4 804 438 266 17 17 chr13 28758088 28758203 -91526109 + ID_B1 SINE B4 93 207 -17 4 804 248 93 0 44 chr13 28758241 28758286 -91526026 + (GGA)n Simple_repeat Simple_repeat 3 45 0 4 804 371 298 17 26 chr13 28758320 28758437 -91525875 - MIRc SINE MIR -98 170 55 4 804 227 75 0 24 chr13 28758623 28758664 -91525648 + B1_Mur4 SINE Alu 110 149 -1 4 804 207 0 0 0 chr13 28758665 28758688 -91525624 + (A)n Simple_repeat Simple_repeat 1 23 0 4 804 333 0 0 0 chr13 28758708 28758745 -91525567 + (GA)n Simple_repeat Simple_repeat 1 37 0 4 804 483 63 0 0 chr13 28759470 28759533 -91524779 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 804 303 209 60 0 chr13 28759615 28759682 -91524630 - ID4_ SINE ID -11 72 2 4 804 838 243 20 5 chr13 28759956 28760159 -91524153 + ID_B1 SINE B4 2 207 -17 4 804 1174 68 0 7 chr13 28760617 28760764 -91523548 + B1_Mus2 SINE Alu 1 146 -1 4 804 324 83 0 0 chr13 28760793 28760841 -91523471 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 4 804 1024 170 0 0 chr13 28760888 28761070 -91523242 - URR1B DNA MER1_type 0 225 44 4 804 4140 25 17 0 chr13 28761137 28761619 -91522693 + L1Md_F3 LINE L1 6095 6584 0 4 804 346 344 58 0 chr13 28763033 28763187 -91521125 + RSINE1 SINE B4 3 165 0 4 804 294 241 0 0 chr13 28763778 28763865 -91520447 + CT-rich Low_complexity Low_complexity 1 87 0 4 804 351 0 0 0 chr13 28764523 28764562 -91519750 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 804 403 226 32 87 chr13 28764586 28764712 -91519600 + B1F1 SINE Alu 24 142 -7 4 804 461 265 44 7 chr13 28764955 28765092 -91519220 - B1F SINE Alu -7 142 1 4 804 375 119 0 0 chr13 28765342 28765409 -91518903 + (CATA)n Simple_repeat Simple_repeat 2 68 0 4 804 333 322 0 0 chr13 28766442 28766532 -91517780 + ID_B1 SINE B4 134 223 -1 4 804 1026 145 22 6 chr13 28766569 28766749 -91517563 - URR1A DNA MER1_type 0 226 44 4 804 297 346 79 0 chr13 28767815 28767942 -91516370 - B1F1 SINE Alu 0 149 13 4 804 180 0 0 0 chr13 28768017 28768037 -91516275 + (T)n Simple_repeat Simple_repeat 1 20 0 4 804 1088 57 14 7 chr13 28768037 28768179 -91516133 - B1_Mm SINE Alu 0 147 5 4 804 210 37 0 0 chr13 28768573 28768600 -91515712 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 4 804 827 43 0 9 chr13 28769142 28769251 -91515061 + B1_Mus1 SINE Alu 33 141 -7 4 804 243 0 0 0 chr13 28769251 28769278 -91515034 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 804 203 229 0 94 chr13 28769290 28769449 -91514863 + G-rich Low_complexity Low_complexity 2 145 0 4 804 528 380 6 0 chr13 28769457 28769703 -91514609 + A-rich Low_complexity Low_complexity 1 247 0 4 804 513 0 0 0 chr13 28769709 28769766 -91514546 + (GGAAA)n Simple_repeat Simple_repeat 3 59 0 4 804 1329 109 5 15 chr13 28770086 28770282 -91514030 - B2_Mm2 SINE B2 -1 194 1 4 804 368 268 176 16 chr13 28771031 28771319 -91512993 + L1MB1 LINE L1 5675 6021 -168 4 804 612 246 22 0 chr13 28771439 28771577 -91512735 + B1F SINE Alu 3 143 -6 4 804 219 167 0 0 chr13 28771592 28771634 -91512678 + GA-rich Low_complexity Low_complexity 1 42 0 4 804 498 292 27 31 chr13 28774145 28774368 -91509944 - RMER15 LTR ERVL 0 575 354 4 804 422 216 57 38 chr13 28775714 28775820 -91508492 + ID_B1 SINE B4 103 210 -14 4 804 237 180 0 0 chr13 28775826 28775876 -91508436 + (CACCAT)n Simple_repeat Simple_repeat 2 51 0 4 804 1066 57 0 7 chr13 28776651 28776793 -91507519 + B1_Mus2 SINE Alu 6 146 -1 4 804 658 251 16 105 chr13 28776894 28777085 -91507227 + B3A SINE B2 3 176 -22 4 804 890 161 79 54 chr13 28777287 28777490 -91506822 - Lx6 LINE L1 0 7460 7253 4 804 342 0 0 0 chr13 28778385 28778423 -91505889 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 4 804 1358 108 0 10 chr13 28778554 28778751 -91505561 - B2_Mm2 SINE B2 0 195 1 4 804 826 246 58 10 chr13 28778789 28778994 -91505318 - B3 SINE B2 -1 215 1 4 804 508 290 41 0 chr13 28779101 28779246 -91505066 + RSINE1 SINE B4 1 151 -14 4 804 1037 220 19 0 chr13 28779462 28779671 -91504641 + B3 SINE B2 1 213 -3 4 804 416 338 20 20 chr13 28779941 28780089 -91504223 + RSINE1 SINE B4 1 148 -17 5 804 520 291 53 34 chr13 28781857 28782063 -91502249 + B3A SINE B2 2 211 -5 5 804 32 43 0 0 chr13 28783089 28783135 -91501177 + AT_rich Low_complexity Low_complexity 1 46 0 5 804 527 274 79 21 chr13 28783332 28783522 -91500790 + ID_B1 SINE B4 14 214 -10 5 804 180 0 0 0 chr13 28783979 28783999 -91500313 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 804 300 237 50 42 chr13 28784736 28784855 -91499457 + PB1D7 SINE Alu 1 120 0 5 804 483 284 19 81 chr13 28785292 28785503 -91498809 - B3A SINE B2 0 198 1 5 804 21 0 0 0 chr13 28785849 28785870 -91498442 + AT_rich Low_complexity Low_complexity 1 21 0 5 804 333 0 0 0 chr13 28786152 28786189 -91498123 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 804 723 287 53 34 chr13 28787286 28787310 -91497002 - B4 SINE B4 0 292 271 5 804 231 114 0 0 chr13 28787310 28787345 -91496967 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 804 329 0 24 0 chr13 28787345 28787386 -91496926 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 5 804 723 287 53 34 chr13 28787386 28787623 -91496689 - B4 SINE B4 -22 270 26 5 804 232 250 0 32 chr13 28788661 28788723 -91495589 + MamRep1161 DNA TcMar 76 135 -822 5 804 246 125 0 0 chr13 28789468 28789508 -91494804 - B1_Mm SINE Alu -28 119 80 5 804 230 366 58 6 chr13 28789906 28790079 -91494233 + MIRc SINE MIR 2 183 -85 5 804 249 365 31 52 chr13 28790307 28790596 -91493716 + Lx8 LINE L1 7107 7389 -84 5 804 232 199 0 25 chr13 28790637 28790712 -91493600 + A-rich Low_complexity Low_complexity 1 73 0 5 804 331 308 16 57 chr13 28790713 28790837 -91493475 + PB1D7 SINE Alu 2 120 0 5 804 255 182 26 143 chr13 28790881 28790958 -91493354 + ID4_ SINE ID 3 70 -13 5 804 430 324 35 14 chr13 28791008 28791152 -91493160 + B1F SINE Alu 1 147 -2 5 804 1151 82 0 0 chr13 28791159 28791306 -91493006 + B1_Mus1 SINE Alu 2 148 0 5 804 425 268 0 35 chr13 28791316 28791432 -91492880 + ID_B1 SINE B4 94 205 -19 5 804 1853 134 72 9 chr13 28793184 28793516 -91490796 + ORR1B1 LTR MaLR 1 353 -41 5 804 758 250 56 37 chr13 28794912 28795128 -91489184 + B4A SINE B4 1 220 -72 5 804 348 24 0 0 chr13 28795198 28795239 -91489073 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 804 235 302 0 31 chr13 28795655 28795720 -91488592 + polypurine Low_complexity Low_complexity 3 65 0 5 804 184 409 38 0 chr13 28795996 28796128 -91488184 - MIRb SINE MIR -111 157 21 5 804 258 295 21 64 chr13 28796717 28796858 -91487454 + MLT1A1 LTR MaLR 9 143 -265 5 804 564 279 60 24 chr13 28796980 28797188 -91487124 - B3A SINE B2 -3 213 1 5 804 337 268 91 73 chr13 28797197 28797362 -91486950 + MLT1A1 LTR MaLR 241 408 0 5 804 372 122 37 93 chr13 28797848 28797956 -91486356 - Lx LINE L1 0 6654 6553 5 804 1043 278 40 21 chr13 28798062 28798434 -91485878 - MTE2b LTR MaLR 0 379 1 5 804 421 277 118 0 chr13 28798540 28798659 -91485653 - ID_B1 SINE B4 -9 215 83 5 804 619 303 118 65 chr13 28799415 28799771 -91484541 + MTEa LTR MaLR 3 377 -2 5 804 321 292 11 0 chr13 28799922 28800011 -91484301 + U6 snRNA snRNA 2 91 -16 5 804 1178 250 31 53 chr13 28800052 28800373 -91483939 + MTEa LTR MaLR 64 377 -2 5 804 28 0 0 0 chr13 28800395 28800423 -91483889 + AT_rich Low_complexity Low_complexity 1 28 0 5 804 297 0 0 0 chr13 28800836 28800869 -91483443 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 804 657 114 0 0 chr13 28801128 28801251 -91483061 + (TG)n Simple_repeat Simple_repeat 2 124 0 5 804 489 307 118 13 chr13 28801274 28801502 -91482810 - B4A SINE B4 -20 272 21 5 804 309 226 64 36 chr13 28802273 28802383 -91481929 - B4A SINE B4 -59 233 121 5 804 260 154 39 0 chr13 28803873 28803925 -91480387 + MTEa LTR MaLR 1 54 -325 5 804 770 234 87 22 chr13 28803961 28804192 -91480120 + MTEa LTR MaLR 134 379 0 5 804 253 247 44 11 chr13 28804268 28804358 -91479954 + MER5A1 DNA MER1_type 60 152 -14 5 804 279 296 16 134 chr13 28804711 28804746 -91479566 - B2_Mm2 SINE B2 -16 179 149 5 804 423 38 0 0 chr13 28804746 28804799 -91479513 + (TAGG)n Simple_repeat Simple_repeat 2 54 0 5 804 520 262 54 31 chr13 28804799 28804950 -91479362 - B3A SINE B2 -41 157 15 5 804 939 117 179 0 chr13 28804980 28805142 -91479170 + B2_Mm1t SINE B2 1 191 -2 5 804 204 200 0 0 chr13 28805293 28805333 -91478979 + C-rich Low_complexity Low_complexity 1 40 0 5 804 586 197 53 38 chr13 28805334 28805466 -91478846 - B1_Mus1 SINE Alu -6 142 9 5 804 266 265 132 66 chr13 28805369 28805490 -91478822 - B4 SINE B4 -94 198 70 5 804 509 279 130 43 chr13 28805576 28805898 -91478414 - L1MB3 LINE L1 -102 6081 5732 5 804 183 156 0 0 chr13 28805917 28805949 -91478363 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 5 804 233 196 179 0 chr13 28805957 28806013 -91478299 - B1_Mus2 SINE Alu -7 140 75 5 804 729 270 4 44 chr13 28806025 28806250 -91478062 - ID_B1 SINE B4 -7 217 2 5 804 324 239 137 69 chr13 28806550 28806725 -91477587 - MamRep434 DNA TcMar -77 349 163 5 804 761 275 236 23 chr13 28808811 28809116 -91475196 - ORR1E LTR MaLR -3 376 7 5 804 243 0 0 0 chr13 28810674 28810701 -91473611 + (A)n Simple_repeat Simple_repeat 1 27 0 5 804 801 295 35 14 chr13 28811764 28812049 -91472263 + B4A SINE B4 2 292 0 5 804 231 114 0 0 chr13 28812103 28812138 -91472174 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 804 282 160 0 0 chr13 28812487 28812537 -91471775 + T-rich Low_complexity Low_complexity 1 50 0 5 804 504 265 61 57 chr13 28815289 28815501 -91468811 - B3 SINE B2 0 216 4 5 804 341 22 0 21 chr13 28815503 28815550 -91468762 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 804 246 122 57 75 chr13 28815550 28815590 -91468722 - PB1 SINE Alu -9 118 76 5 804 569 267 15 15 chr13 28815590 28815687 -91468625 - ID_B1 SINE B4 -10 214 78 5 804 366 289 54 59 chr13 28816742 28816981 -91467331 + L1MB1 LINE L1 5797 6034 -155 5 804 22 35 0 0 chr13 28817290 28817319 -91466993 + AT_rich Low_complexity Low_complexity 1 29 0 5 804 1469 197 42 10 chr13 28817438 28817750 -91466562 - Lx5 LINE L1 0 7050 6729 5 804 263 200 10 192 chr13 28817962 28818061 -91466251 + ID4_ SINE ID 1 81 -2 5 804 384 340 47 51 chr13 28818110 28818386 -91465926 + B4 SINE B4 2 276 -16 5 804 240 35 0 0 chr13 28818545 28818574 -91465738 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 5 804 1001 67 44 0 chr13 28818629 28818764 -91465548 + B1_Mus1 SINE Alu 1 141 -7 5 804 285 29 0 0 chr13 28818770 28818804 -91465508 + (CAAAA)n Simple_repeat Simple_repeat 3 36 0 5 804 659 158 5 0 chr13 28818922 28819037 -91465275 + B1_Mus1 SINE Alu 1 120 0 5 804 192 77 0 0 chr13 28819041 28819067 -91465245 + (GGGA)n Simple_repeat Simple_repeat 2 27 0 5 804 246 284 0 47 chr13 28819356 28819441 -91464871 + CT-rich Low_complexity Low_complexity 6 86 0 5 804 486 320 47 7 chr13 28819648 28819796 -91464516 + RSINE1 SINE B4 1 154 -11 5 804 245 244 25 13 chr13 28819892 28819971 -91464341 + MTEa LTR MaLR 293 372 -7 5 804 888 279 129 6 chr13 28820797 28821129 -91463183 + MTEb LTR MaLR 7 379 0 5 804 229 233 17 0 chr13 28823007 28823091 -91461221 + (CATATA)n Simple_repeat Simple_repeat 1 85 0 5 804 183 205 0 0 chr13 28823108 28823147 -91461165 + (CATA)n Simple_repeat Simple_repeat 3 41 0 5 804 245 355 0 0 chr13 28823201 28823294 -91461018 + ID4_ SINE ID 1 93 -59 5 804 299 62 0 59 chr13 28823363 28823414 -91460898 + (A)n Simple_repeat Simple_repeat 1 48 0 5 804 264 213 0 0 chr13 28824247 28824308 -91460004 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 804 30 27 0 0 chr13 28824885 28824922 -91459390 + AT_rich Low_complexity Low_complexity 1 37 0 5 804 25 0 0 0 chr13 28825171 28825196 -91459116 + AT_rich Low_complexity Low_complexity 1 25 0 5 804 1086 108 0 0 chr13 28825394 28825552 -91458760 + B2_Mm2 SINE B2 1 158 -37 5 804 921 79 0 0 chr13 28825553 28825680 -91458632 + (GAAA)n Simple_repeat Simple_repeat 3 129 0 5 804 418 122 36 12 chr13 28825699 28825782 -91458530 + GA-rich Low_complexity Low_complexity 1 85 0 5 804 21 0 0 0 chr13 28825842 28825863 -91458449 + GC_rich Low_complexity Low_complexity 1 21 0 5 804 188 255 21 0 chr13 28825911 28825958 -91458354 - MIRc SINE MIR -126 142 95 5 804 598 230 125 33 chr13 28826525 28826709 -91457603 + B3 SINE B2 4 204 -12 5 804 325 288 150 8 chr13 28827161 28827294 -91457018 + RSINE1 SINE B4 8 159 -6 5 804 195 69 0 0 chr13 28827321 28827350 -91456962 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 804 249 57 0 0 chr13 28827374 28827409 -91456903 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 5 804 778 245 21 8 chr13 28828519 28828761 -91455551 + L1MA4 LINE L1 5729 5989 -1655 5 804 21 36 0 0 chr13 28829014 28829042 -91455270 + AT_rich Low_complexity Low_complexity 1 28 0 5 804 203 105 0 50 chr13 28829347 28829387 -91454925 + G-rich Low_complexity Low_complexity 5 42 0 5 804 316 352 0 20 chr13 28829461 28829609 -91454703 - Charlie13a DNA Charlie -1233 281 137 5 804 228 235 0 0 chr13 28830320 28830371 -91453941 + PB1D10 SINE Alu 53 103 -14 5 804 600 14 0 0 chr13 28830388 28830457 -91453855 + (GA)n Simple_repeat Simple_repeat 1 69 0 5 804 277 273 119 31 chr13 28830497 28830656 -91453656 - MER5A DNA MER1_type -2 187 15 5 804 531 0 0 0 chr13 28830657 28830716 -91453596 + (GA)n Simple_repeat Simple_repeat 1 59 0 5 804 391 250 28 28 chr13 28831094 28831238 -91453074 + B1F SINE Alu 1 144 -5 6 804 644 246 162 0 chr13 28831253 28831432 -91452880 + ID_B1 SINE B4 1 208 -16 6 804 390 306 105 36 chr13 28832300 28832548 -91451764 - L2a LINE L2 -19 3407 3143 6 804 478 303 90 15 chr13 28832848 28833049 -91451263 - B3 SINE B2 0 216 1 6 804 663 253 14 106 chr13 28833081 28833298 -91451014 + B3A SINE B2 1 197 -1 6 804 387 240 31 0 chr13 28833325 28833421 -91450891 + B1F2 SINE Alu 26 124 -25 6 804 1253 106 5 36 chr13 28833591 28833787 -91450525 + B2_Mm2 SINE B2 1 190 -5 6 804 261 214 56 14 chr13 28834891 28834962 -91449350 + BC1_Mm scRNA scRNA 14 87 -65 6 804 934 157 7 0 chr13 28834969 28835116 -91449196 + B1_Mur4 SINE Alu 1 148 -2 6 804 1315 100 44 31 chr13 28835331 28835559 -91448753 + L1_Mus3 LINE L1 6401 6631 -7 6 804 22 35 0 0 chr13 28835563 28835592 -91448720 + AT_rich Low_complexity Low_complexity 1 29 0 6 100 569 326 64 17 chr13 28835614 28835848 -91448464 + B4A SINE B4 44 288 -4 6 805 766 176 0 7 chr13 28836120 28836257 -91448055 + B2_Mm2 SINE B2 5 140 -55 6 805 417 20 0 0 chr13 28836268 28836318 -91447994 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 805 313 165 127 0 chr13 28836508 28836587 -91447725 - RCHARR1 DNA MER1_type -31 943 855 6 805 430 120 0 12 chr13 28836594 28836678 -91447634 + Lx4A LINE L1 6974 7056 -2 6 805 984 82 0 7 chr13 28836820 28836956 -91447356 + B1_Mus1 SINE Alu 2 136 -12 6 805 1319 258 26 129 chr13 28837095 28837585 -91446727 - RCHARR1 DNA MER1_type -498 476 37 6 805 1159 299 122 14 chr13 28837641 28837946 -91446366 + L1MD2 LINE L1 5305 5609 -750 6 805 1082 47 0 0 chr13 28837946 28838075 -91446237 + B1_Mus1 SINE Alu 1 129 -19 6 805 1159 299 122 14 chr13 28838075 28838423 -91445889 + L1MD2 LINE L1 5610 6029 -330 6 805 459 0 0 0 chr13 28838499 28838550 -91445762 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 805 27 49 0 0 chr13 28838839 28838880 -91445432 + AT_rich Low_complexity Low_complexity 1 41 0 6 805 375 295 88 42 chr13 28839008 28839270 -91445042 + L1ME2z LINE L1 5879 6152 -292 6 805 205 200 0 0 chr13 28839499 28839539 -91444773 + (TTAAA)n Simple_repeat Simple_repeat 5 44 0 6 805 461 271 53 23 chr13 28840338 28840470 -91443842 + B1F1 SINE Alu 6 141 -8 6 805 408 104 0 0 chr13 28840979 28841046 -91443266 + (TCC)n Simple_repeat Simple_repeat 3 69 0 6 805 240 152 65 0 chr13 28841739 28841785 -91442527 + B4A SINE B4 12 60 -232 6 805 545 268 0 8 chr13 28842312 28842440 -91441872 + B4A SINE B4 125 251 -41 6 805 448 224 149 52 chr13 28843367 28843541 -91440771 - B4 SINE B4 0 292 102 6 805 249 226 0 46 chr13 28843588 28843653 -91440659 - ID_B1 SINE B4 -7 217 156 6 805 513 298 8 0 chr13 28843655 28843779 -91440533 + ID_B1 SINE B4 85 209 -15 6 805 210 143 0 0 chr13 28843781 28843816 -91440496 + (CAT)n Simple_repeat Simple_repeat 3 37 0 6 805 891 198 60 15 chr13 28843836 28844036 -91440276 + B3 SINE B2 8 216 0 6 805 717 61 0 0 chr13 28844082 28844181 -91440131 + (GGGA)n Simple_repeat Simple_repeat 4 102 0 6 805 239 356 99 0 chr13 28844835 28844936 -91439376 + Tigger5 DNA MER2_type 61 171 -2235 6 805 252 266 202 0 chr13 28844994 28845088 -91439224 + Tigger5 DNA MER2_type 2290 2402 -4 6 805 504 272 138 80 chr13 28845218 28845320 -91438992 + B4A SINE B4 1 85 -207 6 805 965 84 21 0 chr13 28845320 28845463 -91438849 + (GGGGA)n Simple_repeat Simple_repeat 1 146 0 6 805 504 272 138 80 chr13 28845463 28845636 -91438676 + B4A SINE B4 86 292 0 6 805 360 286 61 26 chr13 28846445 28846560 -91437752 + B1F SINE Alu 10 128 -21 6 805 658 220 38 0 chr13 28846596 28846728 -91437584 + ID_B1 SINE B4 84 220 -4 6 805 227 146 61 20 chr13 28846684 28846733 -91437579 + PB1D10 SINE Alu 67 117 0 6 805 218 224 0 12 chr13 28846860 28846946 -91437366 + (TG)n Simple_repeat Simple_repeat 2 86 0 6 805 352 286 22 0 chr13 28846947 28847038 -91437274 - B3 SINE B2 -15 201 109 6 805 416 281 29 22 chr13 28847566 28847704 -91436608 - ID_B1 SINE B4 -2 222 84 6 805 772 274 20 60 chr13 28847779 28848031 -91436281 + B4A SINE B4 2 243 -49 6 805 536 266 43 115 chr13 28848032 28848240 -91436072 + B3A SINE B2 6 198 0 6 805 250 180 0 57 chr13 28848406 28848459 -91435853 + tRNA-Ala-GCY_ tRNA tRNA 6 55 -20 6 805 243 0 0 0 chr13 28849062 28849089 -91435223 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 805 453 36 0 0 chr13 28849236 28849291 -91435021 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 805 23 0 0 0 chr13 28850960 28850983 -91433329 + AT_rich Low_complexity Low_complexity 1 23 0 6 805 775 289 21 32 chr13 28850985 28851264 -91433048 + B4A SINE B4 3 278 -14 6 805 192 179 0 0 chr13 28851280 28851319 -91432993 + C-rich Low_complexity Low_complexity 3 41 0 6 805 308 186 0 0 chr13 28852173 28852232 -91432080 + B4A SINE B4 86 144 -148 6 805 298 270 67 0 chr13 28852232 28852262 -91432050 + PB1D10 SINE Alu 1 95 -22 6 805 327 49 0 0 chr13 28853195 28853236 -91431076 + (GGA)n Simple_repeat Simple_repeat 2 42 0 6 805 1181 55 0 7 chr13 28853456 28853603 -91430709 + B1_Mm SINE Alu 2 147 0 6 805 281 34 50 33 chr13 28853607 28853667 -91430645 + (CAAA)n Simple_repeat Simple_repeat 2 62 0 6 805 1615 162 122 0 chr13 28854421 28854742 -91429570 - ORR1B2 LTR MaLR -6 361 2 6 805 180 0 0 0 chr13 28854916 28854936 -91429376 + (CAAAC)n Simple_repeat Simple_repeat 1 20 0 6 805 449 179 0 21 chr13 28855087 28855184 -91429128 - PB1D7 SINE Alu -2 118 24 6 805 214 233 0 0 chr13 28855251 28855294 -91429018 + B3A SINE B2 3 45 -153 6 805 583 156 353 39 chr13 28855517 28855545 -91428767 + B3 SINE B2 2 29 -187 6 805 1163 58 0 0 chr13 28855545 28855684 -91428628 + B1_Mus1 SINE Alu 1 139 -9 6 805 246 32 0 0 chr13 28855684 28855715 -91428597 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 805 583 156 353 39 chr13 28855715 28855838 -91428474 + B3 SINE B2 30 201 -15 6 805 228 67 0 0 chr13 28855942 28855972 -91428340 + B1_Mus1 SINE Alu 1 30 -118 6 805 260 53 26 0 chr13 28855984 28856022 -91428290 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 6 805 797 306 106 13 chr13 28856261 28856724 -91427588 + L1M3 LINE L1 4867 5372 -768 6 805 377 263 11 0 chr13 28856770 28856865 -91427447 + ID_B1 SINE B4 112 207 -17 6 805 375 23 0 0 chr13 28856943 28856987 -91427325 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 805 484 279 57 81 chr13 28857181 28857427 -91426885 + L1MA9 LINE L1 6073 6312 0 6 805 974 87 72 0 chr13 28857428 28857566 -91426746 + B1_Mus1 SINE Alu 1 148 0 6 805 22 56 0 0 chr13 28857569 28857605 -91426707 + AT_rich Low_complexity Low_complexity 1 36 0 6 805 276 323 89 0 chr13 28858015 28858139 -91426173 + MIR SINE MIR 6 140 -122 6 805 855 267 29 15 chr13 28858556 28858830 -91425482 - B4A SINE B4 -14 278 1 6 805 25 0 0 0 chr13 28859052 28859077 -91425235 + AT_rich Low_complexity Low_complexity 1 25 0 6 805 1180 49 0 0 chr13 28859079 28859222 -91425090 - B1_Mus1 SINE Alu -4 144 2 6 805 1889 192 36 0 chr13 28859261 28859621 -91424691 - ORR1D1 LTR MaLR -1 373 1 6 805 228 167 24 0 chr13 28859693 28859735 -91424577 + L1M3 LINE L1 5694 5736 -447 6 805 265 111 22 0 chr13 28859852 28859897 -91424415 + ID_B1 SINE B4 113 158 -66 6 805 538 287 0 0 chr13 28860021 28860164 -91424148 + RSINE1 SINE B4 2 144 -21 6 805 239 274 30 40 chr13 28860292 28860391 -91423921 + GA-rich Low_complexity Low_complexity 3 100 0 6 805 441 81 0 0 chr13 28861196 28861258 -91423054 + (TG)n Simple_repeat Simple_repeat 2 63 0 6 805 299 222 12 0 chr13 28861829 28861910 -91422402 - ID4_ SINE ID 0 83 2 6 805 341 224 29 41 chr13 28861919 28862060 -91422252 - B1F1 SINE Alu -9 140 7 6 805 580 185 241 12 chr13 28863298 28863468 -91420844 + B3 SINE B2 2 210 -6 6 805 758 224 44 44 chr13 28864924 28865129 -91419183 - B3 SINE B2 -10 206 2 6 805 893 274 35 4 chr13 28865198 28865458 -91418854 + B4 SINE B4 2 269 -23 6 805 395 273 50 7 chr13 28865804 28865819 -91418493 + B1F2 SINE Alu 3 148 -1 6 805 515 234 8 8 chr13 28865819 28865944 -91418368 + ID_B1 SINE B4 99 223 -1 6 805 207 0 0 0 chr13 28866512 28866535 -91417777 + (A)n Simple_repeat Simple_repeat 1 23 0 6 805 320 312 9 0 chr13 28866839 28866951 -91417361 + (CA)n Simple_repeat Simple_repeat 1 113 0 6 805 543 66 0 0 chr13 28868048 28868124 -91416188 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 805 345 250 125 33 chr13 28868159 28868279 -91416033 - B4 SINE B4 -37 255 125 6 805 702 134 56 63 chr13 28868685 28868828 -91415484 + B1_Mus1 SINE Alu 7 148 0 6 805 608 74 12 0 chr13 28868962 28869057 -91415255 + B1_Mus2 SINE Alu 2 106 -14 6 805 483 18 0 0 chr13 28869057 28869113 -91415199 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 805 185 94 0 30 chr13 28869174 28869207 -91415105 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 6 805 622 268 212 25 chr13 28869997 28870242 -91414070 + B4A SINE B4 2 292 0 6 805 297 286 76 0 chr13 28870529 28870648 -91413664 + MER44A DNA MER2_type 103 230 -109 6 805 272 282 134 24 chr13 28870831 28871078 -91413234 + L2a LINE L2 3128 3401 -25 6 805 1098 64 0 14 chr13 28871079 28871222 -91413090 + B1_Mm SINE Alu 1 141 -6 6 805 423 0 0 0 chr13 28871223 28871270 -91413042 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 805 662 0 13 0 chr13 28871270 28871347 -91412965 + (GA)n Simple_repeat Simple_repeat 2 80 0 6 805 386 320 155 4 chr13 28871465 28871691 -91412621 - MER2 DNA MER2_type 0 345 86 7 805 442 246 20 55 chr13 28872445 28872591 -91411721 - MLT1A LTR MaLR -212 162 22 7 805 246 257 72 96 chr13 28872854 28872979 -91411333 + RMER5 LTR ERV1 33 154 -380 7 805 714 270 14 19 chr13 28872993 28873208 -91411104 + RMER5 LTR ERV1 294 507 -27 7 805 371 242 150 38 chr13 28873437 28873451 -91410861 + B1F2 SINE Alu 1 143 -1 7 805 460 212 123 9 chr13 28873451 28873565 -91410747 + ID_B1 SINE B4 92 218 -6 7 805 291 140 0 0 chr13 28874503 28874553 -91409759 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 805 196 264 53 53 chr13 28875359 28875435 -91408877 - MIR SINE MIR -129 133 58 7 805 1289 254 25 0 chr13 28875865 28876148 -91408164 - B4A SINE B4 -2 290 1 7 805 273 146 0 0 chr13 28876164 28876212 -91408100 + (A)n Simple_repeat Simple_repeat 1 48 0 7 805 1019 15 15 0 chr13 28876219 28876351 -91407961 + B1_Mm SINE Alu 14 147 0 7 805 200 125 25 0 chr13 28876351 28876391 -91407921 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 7 805 470 240 147 34 chr13 28876415 28876592 -91407720 - B3A SINE B2 0 198 2 7 805 225 0 0 0 chr13 28876592 28876617 -91407695 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 7 805 331 292 98 15 chr13 28876651 28876783 -91407529 - B3 SINE B2 -72 144 2 7 805 811 222 194 0 chr13 28876847 28877027 -91407285 - B3 SINE B2 0 216 2 7 805 479 308 13 20 chr13 28877971 28878120 -91406192 - RSINE1 SINE B4 -14 151 4 7 805 434 322 6 57 chr13 28878213 28878371 -91405941 + ID_B1 SINE B4 7 156 -68 7 805 255 273 112 38 chr13 28879969 28880049 -91404263 + RSINE1 SINE B4 38 123 -42 7 805 329 235 81 10 chr13 28880290 28880389 -91403923 + Lx2 LINE L1 6886 6991 -6 7 805 1589 65 0 0 chr13 28880689 28880888 -91403424 + L1Md_T LINE L1 6384 6582 0 7 805 1091 58 7 0 chr13 28881939 28882076 -91402236 + B1_Mus1 SINE Alu 1 138 -10 7 805 714 24 0 0 chr13 28882286 28882370 -91401942 + (GA)n Simple_repeat Simple_repeat 2 85 0 7 805 441 0 0 0 chr13 28883258 28883307 -91401005 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 805 282 73 0 0 chr13 28883344 28883385 -91400927 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 7 805 309 238 9 95 chr13 28883386 28883502 -91400810 - PB1D9 SINE Alu -12 108 3 7 805 684 143 104 15 chr13 28883531 28883666 -91400646 - B1_Mur2 SINE Alu -1 148 2 7 805 321 198 48 125 chr13 28883758 28883862 -91400450 - B3A SINE B2 -102 96 1 7 805 436 346 7 7 chr13 28884241 28884378 -91399934 - B4 SINE B4 -153 139 3 7 805 543 31 0 0 chr13 28885303 28885368 -91398944 + (GAAA)n Simple_repeat Simple_repeat 4 68 0 7 805 278 260 37 46 chr13 28885446 28885555 -91398757 + LTR85a LTR Gypsy? 10 117 -585 7 805 229 297 81 0 chr13 28886258 28886332 -91397980 + ID2 SINE ID 1 80 -3 7 805 21 57 0 0 chr13 28886332 28886367 -91397945 + AT_rich Low_complexity Low_complexity 1 35 0 7 805 24 0 0 0 chr13 28886997 28887021 -91397291 + AT_rich Low_complexity Low_complexity 1 24 0 7 805 1061 83 7 0 chr13 28888170 28888315 -91395997 + B1_Mus1 SINE Alu 1 146 -2 7 805 327 146 0 0 chr13 28888316 28888371 -91395941 + (TTA)n Simple_repeat Simple_repeat 3 57 0 7 805 446 294 0 0 chr13 28888802 28888894 -91395418 + PB1D10 SINE Alu 6 97 -20 7 805 516 294 141 0 chr13 28888998 28889175 -91395137 - ID_B1 SINE B4 -9 215 14 7 805 397 188 35 12 chr13 28890669 28890755 -91393557 + RSINE1 SINE B4 16 103 -62 7 805 288 0 0 0 chr13 28890923 28890955 -91393357 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 805 230 186 129 48 chr13 28891723 28891785 -91392527 + Lx5 LINE L1 5705 5771 -1279 7 805 541 287 64 0 chr13 28892062 28892219 -91392093 + B3A SINE B2 2 168 -30 7 805 351 44 0 0 chr13 28892224 28892269 -91392043 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 805 364 265 113 8 chr13 28892379 28892512 -91391800 - B1F1 SINE Alu -2 147 1 7 805 1579 47 5 0 chr13 28895336 28895526 -91388786 + B2_Mm1a SINE B2 2 192 -1 7 805 442 83 66 4 chr13 28895545 28895642 -91388670 + B1_Mus2 SINE Alu 7 117 0 7 805 25 0 0 0 chr13 28895696 28895721 -91388591 + AT_rich Low_complexity Low_complexity 1 25 0 7 805 297 0 0 0 chr13 28895972 28896005 -91388307 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 805 690 242 40 55 chr13 28896523 28896724 -91387588 - B3A SINE B2 0 198 1 7 805 893 145 13 27 chr13 28896765 28896914 -91387398 + B1_Mus1 SINE Alu 1 147 -1 7 805 428 292 117 0 chr13 28897445 28897616 -91386696 + MLT1N2 LTR MaLR 372 562 0 7 805 649 323 34 31 chr13 28898040 28898331 -91385981 - B4A SINE B4 0 292 1 7 805 311 294 0 0 chr13 28898331 28898433 -91385879 + C-rich Low_complexity Low_complexity 1 102 0 7 805 732 295 104 21 chr13 28898787 28899113 -91385199 - MTEa LTR MaLR -21 358 6 7 805 320 289 78 137 chr13 28899400 28899476 -91384836 + B4A SINE B4 2 67 -225 7 805 804 211 0 0 chr13 28899476 28899623 -91384689 + B1_Mus1 SINE Alu 2 148 0 7 805 320 289 78 137 chr13 28899623 28899839 -91384473 + B4A SINE B4 68 277 -15 7 805 432 82 0 0 chr13 28899850 28899911 -91384401 + (CATA)n Simple_repeat Simple_repeat 3 63 0 7 805 601 323 21 10 chr13 28900263 28900457 -91383855 + ID_B1 SINE B4 16 211 -13 7 805 473 261 89 27 chr13 28900956 28901102 -91383210 + ID_B1 SINE B4 69 223 -1 7 805 264 314 0 0 chr13 28901103 28901173 -91383139 + GA-rich Low_complexity Low_complexity 4 73 0 7 805 400 275 108 40 chr13 28901609 28901757 -91382555 + B4 SINE B4 24 181 -111 7 805 333 0 0 0 chr13 28901792 28901829 -91382483 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 805 2080 124 35 0 chr13 28904186 28904501 -91379811 + ORR1A4 LTR MaLR 1 326 -3 7 805 1470 147 129 13 chr13 28905298 28905608 -91378704 + ORR1B2 LTR MaLR 20 365 -2 7 805 590 304 41 64 chr13 28905765 28906060 -91378252 + B4A SINE B4 5 292 0 7 805 405 221 9 19 chr13 28906740 28906846 -91377466 - B4A SINE B4 -3 289 185 7 805 238 301 0 21 chr13 28907381 28907476 -91376836 - MLT1A1 LTR MaLR 0 408 316 7 805 468 314 21 64 chr13 28907686 28907921 -91376391 - MTE2a LTR MaLR -90 289 65 7 805 410 179 131 9 chr13 28907922 28908029 -91376283 + B1_Mur3 SINE Alu 29 148 -1 7 805 699 120 0 0 chr13 28908035 28908143 -91376169 + (GGGA)n Simple_repeat Simple_repeat 2 109 0 7 805 591 85 0 0 chr13 28908832 28908914 -91375398 + (GA)n Simple_repeat Simple_repeat 1 82 0 7 805 742 56 9 18 chr13 28909108 28909217 -91375095 + (GGGA)n Simple_repeat Simple_repeat 1 108 0 7 805 228 86 0 0 chr13 28909233 28909268 -91375044 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 7 805 600 291 65 29 chr13 28909286 28909588 -91374724 + B4 SINE B4 1 292 0 7 805 198 0 0 0 chr13 28909762 28909784 -91374528 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 805 244 0 0 53 chr13 28910085 28910123 -91374189 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 7 805 461 273 0 32 chr13 28910517 28910642 -91373670 + ID_B1 SINE B4 95 215 -9 7 805 799 55 0 9 chr13 28910692 28910801 -91373511 - B1_Mm SINE Alu -38 109 2 7 805 207 0 0 0 chr13 28911242 28911265 -91373047 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 805 377 190 17 3 chr13 28911289 28911370 -91372942 - B4A SINE B4 -83 82 1 7 805 3961 39 35 0 chr13 28911496 28911981 -91372331 + L1Md_F3 LINE L1 6083 6584 0 7 805 212 309 0 18 chr13 28911995 28912051 -91372261 + B4 SINE B4 4 58 -234 7 805 664 203 0 89 chr13 28912068 28912225 -91372087 + B1_Mus1 SINE Alu 2 144 -4 7 805 345 333 0 10 chr13 28912293 28912393 -91371919 + B4 SINE B4 49 147 -145 7 805 353 250 12 23 chr13 28912534 28912620 -91371692 - ID_B1 SINE B4 -12 212 128 7 805 390 250 107 57 chr13 28913195 28913335 -91370977 - RSINE1 SINE B4 -18 147 1 7 805 564 107 0 0 chr13 28914035 28914138 -91370174 + (GAAA)n Simple_repeat Simple_repeat 4 106 0 7 805 306 125 0 0 chr13 28914614 28914662 -91369650 + (CAGG)n Simple_repeat Simple_repeat 3 50 0 7 805 348 262 39 0 chr13 28914925 28915028 -91369284 + L1MB3 LINE L1 6032 6138 -45 7 805 729 251 75 33 chr13 28915487 28915701 -91368611 + ID_B1 SINE B4 2 224 0 7 805 1248 120 0 6 chr13 28916913 28917089 -91367223 + B2_Mm2 SINE B2 2 176 -19 7 805 768 246 77 115 chr13 28917197 28917587 -91366725 + MTEa LTR MaLR 1 375 -4 7 805 318 283 189 48 chr13 28917730 28917979 -91366333 + B4A SINE B4 3 286 -6 7 805 562 222 139 73 chr13 28918419 28918584 -91365728 + B3A SINE B2 6 181 -14 7 805 249 236 9 26 chr13 28919491 28919604 -91364708 + GA-rich Low_complexity Low_complexity 2 112 0 7 805 1114 158 104 0 chr13 28919646 28919848 -91364464 + URR1B DNA MER1_type 1 223 -2 7 805 414 286 73 65 chr13 28919848 28919895 -91364417 - CYRA11_Mm Unknown Y-chromosome -433 184 136 7 805 10395 63 15 11 chr13 28919895 28921310 -91363002 + MusHAL1 LINE L1 1292 2712 0 7 805 244 111 0 0 chr13 28921322 28921358 -91362954 + URR1B DNA MER1_type 190 225 0 7 805 450 238 53 8 chr13 28922450 28922581 -91361731 - MLT1A1 LTR MaLR -266 142 6 7 805 540 289 16 0 chr13 28922655 28922783 -91361529 + RSINE1 SINE B4 2 131 -34 7 805 848 118 7 0 chr13 28922800 28922936 -91361376 + (GGAA)n Simple_repeat Simple_repeat 4 140 0 7 805 337 279 28 62 chr13 28922959 28923104 -91361208 + ID_B1 SINE B4 78 217 -7 7 805 689 123 40 24 chr13 28922986 28923111 -91361201 + B1_Mur4 SINE Alu 24 150 0 8 805 287 240 14 138 chr13 28923131 28923276 -91361036 + PB1 SINE Alu 1 127 0 8 805 249 242 15 0 chr13 28923287 28923353 -91360959 + ID4_ SINE ID 8 74 -9 8 805 880 42 0 0 chr13 28924104 28924222 -91360090 + L1Md_F3 LINE L1 6453 6570 -14 8 805 189 147 0 0 chr13 28924224 28924258 -91360054 + (CATA)n Simple_repeat Simple_repeat 3 36 0 8 805 288 0 0 0 chr13 28924306 28924338 -91359974 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 805 783 250 138 33 chr13 28925681 28926047 -91358265 + L1MA4A LINE L1 5498 5904 -399 8 805 259 344 0 0 chr13 28926112 28926216 -91358096 + GA-rich Low_complexity Low_complexity 1 104 0 8 805 423 0 0 0 chr13 28926401 28926448 -91357864 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 805 272 0 79 0 chr13 28927508 28927546 -91356766 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 8 805 602 289 187 10 chr13 28927674 28927968 -91356344 + ORR1E LTR MaLR 4 349 -10 8 805 1569 39 0 0 chr13 28927988 28928167 -91356145 + B2_Mm1a SINE B2 2 180 -13 8 805 225 0 0 0 chr13 28928167 28928192 -91356120 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 8 805 29 28 0 0 chr13 28929616 28929652 -91354660 + AT_rich Low_complexity Low_complexity 1 36 0 8 805 363 141 0 0 chr13 28929907 28929971 -91354341 + (CCA)n Simple_repeat Simple_repeat 1 64 0 8 805 340 254 14 43 chr13 28930552 28930692 -91353620 + MLT1D LTR MaLR 368 503 -2 8 805 429 215 55 27 chr13 28931551 28931661 -91352651 - PB1D7 SINE Alu -2 118 6 8 805 24 0 0 0 chr13 28932567 28932591 -91351721 + AT_rich Low_complexity Low_complexity 1 24 0 8 805 579 209 9 9 chr13 28932591 28932707 -91351605 - PB1D9 SINE Alu -2 118 3 8 805 249 252 95 119 chr13 28932792 28933044 -91351268 - L1MB1 LINE L1 -754 5386 5141 8 805 690 280 87 140 chr13 28933043 28933816 -91350496 + L1MB1 LINE L1 5401 6132 -57 8 805 624 167 0 53 chr13 28934119 28934252 -91350060 - B1_Mur4 SINE Alu -24 126 1 8 805 1061 89 7 0 chr13 28934405 28934551 -91349761 - B1_Mus1 SINE Alu 0 148 2 8 805 712 290 54 68 chr13 28934664 28935016 -91349296 - ORR1E LTR MaLR -2 357 11 8 805 215 125 0 24 chr13 28935735 28935776 -91348536 + (AGGGGG)n Simple_repeat Simple_repeat 3 42 0 8 805 205 152 0 0 chr13 28935782 28935815 -91348497 + (TCTG)n Simple_repeat Simple_repeat 3 35 0 8 805 1308 77 44 0 chr13 28936151 28936333 -91347979 + B2_Mm2 SINE B2 2 191 -4 8 805 257 231 0 0 chr13 28938014 28938066 -91346246 + B1F SINE Alu 43 94 -55 8 805 207 0 0 0 chr13 28938100 28938123 -91346189 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 805 447 35 0 0 chr13 28938123 28938179 -91346133 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 8 805 189 0 0 0 chr13 28938179 28938199 -91346113 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 805 408 265 98 0 chr13 28938210 28938312 -91346000 + B1_Mur1 SINE Alu 36 147 -2 8 805 186 174 0 0 chr13 28938454 28938500 -91345812 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 805 192 40 0 0 chr13 28938623 28938648 -91345664 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 8 805 451 233 0 118 chr13 28938697 28938833 -91345479 + B1F2 SINE Alu 1 120 -29 8 805 441 0 0 0 chr13 28938849 28938898 -91345414 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 805 390 101 0 0 chr13 28938898 28938966 -91345346 + (TG)n Simple_repeat Simple_repeat 2 70 0 8 805 487 315 22 33 chr13 28939905 28940089 -91344223 + B4A SINE B4 3 184 -108 8 805 375 23 0 0 chr13 28940107 28940151 -91344161 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 805 402 100 0 0 chr13 28940654 28940714 -91343598 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 805 252 0 0 0 chr13 28940714 28940741 -91343571 + (GA)n Simple_repeat Simple_repeat 1 28 0 8 805 443 230 347 27 chr13 28941124 28941343 -91342969 + B4 SINE B4 4 292 0 8 805 396 0 0 0 chr13 28941861 28941905 -91342407 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 805 733 206 7 0 chr13 28941932 28942068 -91342244 + B1_Mur2 SINE Alu 6 142 -7 8 805 606 14 0 0 chr13 28942100 28942171 -91342141 + (TAGA)n Simple_repeat Simple_repeat 1 71 0 8 805 288 0 0 0 chr13 28942172 28942204 -91342108 + (CAGG)n Simple_repeat Simple_repeat 1 32 0 8 805 216 158 0 0 chr13 28942204 28942242 -91342070 + (TGGG)n Simple_repeat Simple_repeat 3 40 0 8 805 582 261 73 21 chr13 28942260 28942452 -91341860 + B3 SINE B2 9 210 -6 8 805 22 0 0 0 chr13 28942458 28942480 -91341832 + AT_rich Low_complexity Low_complexity 1 22 0 8 805 639 194 73 15 chr13 28942480 28942616 -91341696 + B1_Mur3 SINE Alu 6 149 0 8 805 245 259 192 20 chr13 28942626 28942754 -91341558 + B1F SINE Alu 1 133 -16 8 805 584 230 16 0 chr13 28942853 28942979 -91341333 + RSINE1 SINE B4 3 130 -35 8 805 478 279 74 31 chr13 28943659 28943888 -91340424 + L1ME4a LINE L1 5622 5860 -264 8 805 278 246 15 0 chr13 28944147 28944212 -91340100 - ID4 SINE ID -13 70 5 8 805 453 138 0 0 chr13 28944360 28944440 -91339872 + (TG)n Simple_repeat Simple_repeat 2 81 0 8 805 621 216 21 8 chr13 28944441 28944599 -91339713 - B4 SINE B4 -112 180 21 8 805 1368 90 0 0 chr13 28945120 28945413 -91338899 + (CTTG)n Simple_repeat Simple_repeat 1 293 0 8 805 277 302 10 20 chr13 28946700 28946798 -91337514 + PB1 SINE Alu 1 97 -30 8 805 492 176 0 0 chr13 28947020 28947105 -91337207 - B1_Mur2 SINE Alu 0 149 65 8 805 391 307 71 16 chr13 28947252 28947434 -91336878 + MER2 DNA MER2_type 36 227 -118 8 805 1014 150 155 0 chr13 28947443 28947636 -91336676 + URR1A DNA MER1_type 1 223 -3 8 805 1252 115 15 35 chr13 28947636 28947835 -91336477 + B2_Mm2 SINE B2 1 195 0 8 805 255 196 18 0 chr13 28948160 28948216 -91336096 - ORR1E LTR MaLR 0 379 323 8 805 294 304 44 9 chr13 28948226 28948339 -91335973 + B4A SINE B4 124 240 -52 8 805 462 325 108 58 chr13 28948384 28948642 -91335670 - ORR1E LTR MaLR -38 321 51 8 805 242 296 16 94 chr13 28948908 28949035 -91335277 + PB1D7 SINE Alu 2 118 -2 8 805 881 236 115 11 chr13 28949047 28949317 -91334995 + L1ME3A LINE L1 5389 5686 -487 8 805 295 286 161 0 chr13 28949412 28949573 -91334739 + L1ME3A LINE L1 5692 5878 -295 8 805 219 401 36 18 chr13 28949879 28950044 -91334268 + B4A SINE B4 2 169 -123 8 805 225 0 0 0 chr13 28950189 28950214 -91334098 + (TC)n Simple_repeat Simple_repeat 1 25 0 8 805 480 18 0 0 chr13 28950214 28950270 -91334042 + (CA)n Simple_repeat Simple_repeat 1 57 0 8 805 301 194 81 0 chr13 28950458 28950520 -91333792 + ID4_ SINE ID 16 82 -1 8 805 696 298 96 40 chr13 28950531 28950853 -91333459 + MLT1B LTR MaLR 29 368 -22 8 805 356 233 27 0 chr13 28950945 28951018 -91333294 + ID4_ SINE ID 1 75 -8 8 805 477 0 0 0 chr13 28951418 28951471 -91332841 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 805 409 192 14 0 chr13 28952396 28952469 -91331843 + RSINE1 SINE B4 56 129 -36 8 805 21 0 0 0 chr13 28952552 28952573 -91331739 + AT_rich Low_complexity Low_complexity 1 21 0 8 805 555 261 7 7 chr13 28952585 28952724 -91331588 + B1_Mur1 SINE Alu 6 144 -5 8 805 35 24 0 0 chr13 28952850 28952892 -91331420 + AT_rich Low_complexity Low_complexity 1 42 0 8 805 798 209 0 7 chr13 28953008 28953157 -91331155 - B1_Mur4 SINE Alu 0 150 3 8 805 411 221 42 42 chr13 28954231 28954349 -91329963 - PB1D9 SINE Alu -2 118 1 8 805 264 30 0 0 chr13 28954364 28954397 -91329915 + (CAA)n Simple_repeat Simple_repeat 2 34 0 8 805 391 55 0 65 chr13 28954500 28954577 -91329735 + (TTTTTG)n Simple_repeat Simple_repeat 2 73 0 8 805 1538 304 131 22 chr13 28954585 28955362 -91328950 - Lx7 LINE L1 -772 6924 6063 8 805 956 329 20 20 chr13 28955359 28955753 -91328559 + Lx8 LINE L1 6932 7325 -148 8 805 929 128 7 39 chr13 28955811 28955965 -91328347 + B1_Mur4 SINE Alu 1 149 -1 8 805 405 0 0 0 chr13 28956130 28956175 -91328137 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 805 608 198 94 0 chr13 28956646 28956774 -91327538 - B1_Mur4 SINE Alu -8 142 2 8 805 1215 61 0 0 chr13 28956955 28957102 -91327210 + B1_Mus1 SINE Alu 1 147 -1 8 805 613 251 140 5 chr13 28957377 28957577 -91326735 - Lx8 LINE L1 -220 7253 7027 8 805 586 180 34 1 chr13 28957584 28957703 -91326609 + B1_Mur1 SINE Alu 22 142 -7 8 805 404 289 31 0 chr13 28957858 28957955 -91326357 + B1F SINE Alu 41 140 -9 8 805 220 182 45 0 chr13 28957958 28958002 -91326310 + A-rich Low_complexity Low_complexity 3 48 0 8 805 497 207 74 0 chr13 28958385 28958506 -91325806 + B1F2 SINE Alu 20 149 0 8 805 357 306 0 10 chr13 28958734 28958833 -91325479 + ID_B1 SINE B4 82 179 -45 8 805 623 255 114 31 chr13 28959619 28959874 -91324438 + B4 SINE B4 1 276 -16 8 805 316 53 0 66 chr13 28959877 28959938 -91324374 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 8 805 235 324 14 0 chr13 28960317 28960388 -91323924 - ID4_ SINE ID -7 76 5 8 805 391 245 89 37 chr13 28960390 28960502 -91323810 - PB1D10 SINE Alu 0 127 10 8 805 636 14 0 0 chr13 28960526 28960599 -91323713 + (TG)n Simple_repeat Simple_repeat 1 73 0 8 805 234 236 36 0 chr13 28960618 28960673 -91323639 - PB1D10 SINE Alu -12 105 49 8 805 277 258 178 40 chr13 28960915 28961016 -91323296 + PB1D7 SINE Alu 3 117 -3 8 805 599 259 7 26 chr13 28961125 28961276 -91323036 + B1_Mus1 SINE Alu 1 148 0 8 805 204 125 0 0 chr13 28961276 28961308 -91323004 + (A)n Simple_repeat Simple_repeat 1 32 0 9 805 489 110 0 0 chr13 28961338 28961429 -91322883 + (CAGG)n Simple_repeat Simple_repeat 2 92 0 9 805 210 216 39 10 chr13 28961430 28961533 -91322779 + GA-rich Low_complexity Low_complexity 3 108 0 9 805 253 307 14 21 chr13 28961804 28961947 -91322365 + (TGGA)n Simple_repeat Simple_repeat 3 144 0 9 805 255 181 13 40 chr13 28961805 28961880 -91322432 + (CATG)n Simple_repeat Simple_repeat 3 75 0 9 805 383 272 43 9 chr13 28962046 28962161 -91322151 + PB1D7 SINE Alu 1 119 -1 9 805 459 290 58 6 chr13 28962289 28962445 -91321867 + RSINE1 SINE B4 2 165 0 9 805 1067 84 7 0 chr13 28963609 28963752 -91320560 + B1_Mus1 SINE Alu 3 146 -2 9 805 510 79 0 0 chr13 28963755 28963831 -91320481 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 9 805 522 295 200 4 chr13 28963852 28964077 -91320235 + MTEb LTR MaLR 1 269 -110 9 805 780 11 0 0 chr13 28964078 28964167 -91320145 + (GAGAA)n Simple_repeat Simple_repeat 2 90 0 9 805 232 191 0 21 chr13 28964207 28964255 -91320057 + A-rich Low_complexity Low_complexity 5 51 0 9 805 227 152 183 17 chr13 28964255 28964315 -91319997 + MTEb LTR MaLR 306 375 -4 9 805 203 0 37 0 chr13 28964317 28964344 -91319968 + (CCCCCA)n Simple_repeat Simple_repeat 1 28 0 9 805 1118 120 0 4 chr13 28964668 28964895 -91319417 + (TG)n Simple_repeat Simple_repeat 1 226 0 9 805 269 326 0 0 chr13 28964925 28965017 -91319295 + GA-rich Low_complexity Low_complexity 2 93 0 9 805 533 176 19 10 chr13 28965145 28965248 -91319064 - ID_B1 SINE B4 -23 201 98 9 805 253 228 18 0 chr13 28965483 28965540 -91318772 + ID SINE ID 2 59 -165 9 805 1176 55 7 0 chr13 28965543 28965688 -91318624 + B1_Mus1 SINE Alu 2 147 -1 9 805 195 42 0 0 chr13 28966138 28966162 -91318150 + (T)n Simple_repeat Simple_repeat 1 24 0 9 100 1298 153 63 234 chr13 28966692 28967153 -91317159 + ORR1C2 LTR MaLR 3 384 0 9 806 1259 27 0 0 chr13 28967190 28967337 -91316975 + B1_Mm SINE Alu 1 147 0 9 806 311 318 37 0 chr13 28967505 28967612 -91316700 - PB1D10 SINE Alu -5 112 2 9 806 303 271 42 0 chr13 28967870 28967966 -91316346 + PB1D10 SINE Alu 8 107 -10 9 806 426 20 0 0 chr13 28967966 28968017 -91316295 + (CATA)n Simple_repeat Simple_repeat 4 54 0 9 806 557 294 74 50 chr13 28968033 28968316 -91315996 + B4 SINE B4 2 291 -1 9 806 300 102 0 0 chr13 28968319 28968368 -91315944 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 806 806 210 107 57 chr13 28968543 28968806 -91315506 + RMER15 LTR ERVL 298 573 -2 9 806 192 374 71 18 chr13 28969100 28969269 -91315043 + MIRc SINE MIR 41 218 -50 9 806 629 207 59 0 chr13 28969277 28969412 -91314900 - B1_Mur1 SINE Alu -5 144 2 9 806 22 0 0 0 chr13 28969421 28969443 -91314869 + AT_rich Low_complexity Low_complexity 1 22 0 9 806 378 0 0 0 chr13 28969482 28969524 -91314788 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 806 528 287 59 96 chr13 28969524 28969753 -91314559 - B4 SINE B4 -22 270 52 9 806 256 280 128 0 chr13 28969854 28969979 -91314333 + L2a LINE L2 2267 2407 -1012 9 806 351 275 29 58 chr13 28969999 28970138 -91314174 + B4A SINE B4 2 136 -156 9 806 225 355 42 51 chr13 28970305 28970637 -91313675 + L2a LINE L2 2526 2854 -565 9 806 310 299 143 13 chr13 28970770 28971085 -91313227 + L2a LINE L2 3045 3400 -26 9 806 525 229 8 16 chr13 28971304 28971428 -91312884 + B3A SINE B2 1 123 -75 9 806 450 0 0 0 chr13 28971468 28971518 -91312794 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 806 246 331 147 7 chr13 28971653 28971796 -91312516 + RSINE1 SINE B4 1 163 -2 9 806 1121 83 0 0 chr13 28972027 28972172 -91312140 + B1_Mus2 SINE Alu 2 146 -1 9 806 352 261 264 13 chr13 28972892 28973051 -91311261 - ID_B1 SINE B4 -23 201 3 9 806 417 308 0 95 chr13 28973115 28973262 -91311050 + RSINE1 SINE B4 4 136 -29 9 806 371 208 0 0 chr13 28973727 28973799 -91310513 - ID4_ SINE ID -10 73 2 9 806 242 343 35 42 chr13 28973815 28973958 -91310354 - MIRb SINE MIR -89 179 38 9 806 21 0 0 0 chr13 28976875 28976896 -91307416 + AT_rich Low_complexity Low_complexity 1 21 0 9 806 208 186 17 17 chr13 28977239 28977299 -91307013 + CT-rich Low_complexity Low_complexity 1 60 0 9 806 441 270 14 62 chr13 28979643 28979789 -91304523 + B1F1 SINE Alu 10 148 -1 9 806 276 149 0 0 chr13 28979966 28980013 -91304299 + (TTG)n Simple_repeat Simple_repeat 3 49 0 9 806 647 235 0 15 chr13 28980015 28980149 -91304163 - B1_Mur2 SINE Alu -13 136 5 9 806 287 233 38 98 chr13 28980479 28980612 -91303700 + LTR16E1 LTR ERVL 411 535 -3 9 806 866 145 0 0 chr13 28980937 28981068 -91303244 + B3 SINE B2 1 131 -85 9 806 366 80 0 0 chr13 28981068 28981118 -91303194 + (TC)n Simple_repeat Simple_repeat 2 51 0 9 806 216 0 0 0 chr13 28981118 28981142 -91303170 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 806 243 321 0 0 chr13 28981297 28981353 -91302959 + ID4_ SINE ID 22 77 -6 9 806 221 274 8 0 chr13 28981359 28981476 -91302836 + GA-rich Low_complexity Low_complexity 3 120 0 9 806 213 333 43 0 chr13 28981878 28981947 -91302365 - RSINE1 SINE B4 -15 150 79 9 806 491 297 29 0 chr13 28982094 28982232 -91302080 - RSINE1 SINE B4 -1 164 23 9 806 1006 172 134 0 chr13 28982277 28982463 -91301849 - B3 SINE B2 -5 211 1 9 806 218 303 95 32 chr13 28982718 28982733 -91301579 - B1F SINE Alu -1 148 137 9 806 1137 156 102 0 chr13 28982733 28982938 -91301374 - URR1A DNA MER1_type 0 226 1 9 806 289 291 58 0 chr13 28982942 28983045 -91301267 - ID_B1 SINE B4 -17 207 99 9 806 261 217 23 25 chr13 28983123 28983215 -91301097 + MIR SINE MIR 156 248 -20 9 806 558 223 85 0 chr13 28983362 28983492 -91300820 - B1_Mur4 SINE Alu -9 141 1 9 806 252 0 0 0 chr13 28983512 28983540 -91300772 + (TA)n Simple_repeat Simple_repeat 1 28 0 9 806 660 59 0 0 chr13 28983837 28983922 -91300390 + (TC)n Simple_repeat Simple_repeat 1 85 0 9 806 671 179 250 6 chr13 28983954 28984134 -91300178 + URR1A DNA MER1_type 1 224 -2 9 806 484 323 82 55 chr13 28984282 28984646 -91299666 - L1M2 LINE L1 -1822 4321 3940 9 806 3037 117 53 6 chr13 28984646 28985119 -91299193 - RLTR19 LTR ERVK -4 495 1 9 806 484 323 82 55 chr13 28985119 28985157 -91299155 - L1M2 LINE L1 -2204 3939 3908 9 806 485 197 8 86 chr13 28985191 28985319 -91298993 + PB1D7 SINE Alu 3 120 0 9 806 212 114 45 0 chr13 28985319 28985363 -91298949 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 9 806 310 319 79 12 chr13 28985370 28985535 -91298777 + B3A SINE B2 21 196 -2 9 806 650 288 12 12 chr13 28985995 28986075 -91298237 + ID SINE ID 2 81 -143 9 806 249 330 26 43 chr13 28986075 28986192 -91298120 + B1_Mus2 SINE Alu 1 115 -32 9 806 238 128 0 0 chr13 28986447 28986486 -91297826 + RSINE1 SINE B4 89 127 -38 9 806 447 19 0 0 chr13 28986633 28986685 -91297627 + (TTCTCC)n Simple_repeat Simple_repeat 3 54 0 9 806 1125 58 7 0 chr13 28986685 28986822 -91297490 - B1_Mus1 SINE Alu -10 138 1 9 806 1435 81 11 0 chr13 28986830 28987016 -91297296 - B2_Mm2 SINE B2 -7 188 1 9 806 3809 181 42 81 chr13 28987017 28987117 -91297195 - RMER19B LTR ERVK -19 883 793 9 806 1064 75 6 64 chr13 28987117 28987250 -91297062 + B1_Mus2 SINE Alu 1 134 -13 9 806 216 0 0 0 chr13 28987250 28987274 -91297038 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 9 806 1064 75 6 64 chr13 28987274 28987296 -91297016 + B1_Mus2 SINE Alu 135 147 0 9 806 3809 181 42 81 chr13 28987296 28988113 -91296199 - RMER19B LTR ERVK -110 792 1 9 806 1145 82 0 0 chr13 28988114 28988261 -91296051 + B1_Mus1 SINE Alu 2 148 0 9 806 824 153 79 14 chr13 28988327 28988466 -91295846 - B1_Mus1 SINE Alu 0 148 1 9 806 493 221 29 22 chr13 28988468 28988607 -91295705 - B1F SINE Alu 0 149 10 9 806 1121 105 419 21 chr13 28988654 28988888 -91295424 - ORR1A2 LTR MaLR 0 327 1 9 806 189 0 0 0 chr13 28990079 28990100 -91294212 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 9 806 498 203 41 33 chr13 28990218 28990340 -91293972 + B1_Mur2 SINE Alu 11 133 -16 9 806 542 273 98 29 chr13 28990358 28990562 -91293750 + ID_B1 SINE B4 7 224 0 9 806 30 0 0 0 chr13 28990641 28990671 -91293641 + AT_rich Low_complexity Low_complexity 1 30 0 9 806 692 186 0 65 chr13 28990693 28990830 -91293482 + B1_Mur3 SINE Alu 5 139 -10 9 806 180 0 0 0 chr13 28990830 28990850 -91293462 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 9 806 692 186 0 65 chr13 28990850 28990867 -91293445 + B1_Mur3 SINE Alu 140 149 0 9 806 377 192 173 0 chr13 28991711 28991815 -91292497 - ID_B1 SINE B4 -1 223 102 9 806 864 198 107 0 chr13 28992406 28992593 -91291719 + B3 SINE B2 5 211 -5 9 806 560 225 19 84 chr13 28992663 28992818 -91291494 + B1_Mur4 SINE Alu 4 148 -2 9 806 310 117 52 0 chr13 28992862 28992939 -91291373 + (TCTG)n Simple_repeat Simple_repeat 2 82 0 9 806 254 241 169 0 chr13 28993209 28993292 -91291020 + RSINE1 SINE B4 2 98 -67 9 806 970 40 96 0 chr13 28993389 28993514 -91290798 + B1_Mus2 SINE Alu 2 138 -9 9 806 1176 82 0 0 chr13 28993554 28993701 -91290611 + B1_Mus2 SINE Alu 1 147 0 9 806 412 261 35 35 chr13 28994178 28994293 -91290019 + PB1D7 SINE Alu 6 120 0 9 806 208 135 0 0 chr13 28994425 28994462 -91289850 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 806 490 228 56 16 chr13 28994967 28995092 -91289220 - RCHARR1 DNA MER1_type 0 974 845 9 806 449 215 65 9 chr13 28995103 28995211 -91289101 + B3A SINE B2 1 114 -84 9 806 957 298 44 17 chr13 28995239 28995536 -91288776 + RCHARR1 DNA MER1_type 25 329 -645 9 806 718 253 69 16 chr13 28995562 28995751 -91288561 - ID_B1 SINE B4 -20 204 6 1 806 292 229 48 0 chr13 28995756 28995839 -91288473 + RCHARR1 DNA MER1_type 381 467 -507 9 806 378 0 0 0 chr13 28995944 28995986 -91288326 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 806 276 342 18 95 chr13 28995986 28996154 -91288158 + B4A SINE B4 6 160 -132 1 806 580 208 24 16 chr13 28996083 28996210 -91288102 + B1_Mur2 SINE Alu 6 133 -16 1 806 276 30 0 0 chr13 28996211 28996244 -91288068 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 806 679 263 53 19 chr13 28996496 28996705 -91287607 - B3 SINE B2 0 216 1 1 806 1151 62 7 0 chr13 28996726 28996872 -91287440 - B1_Mus2 SINE Alu 0 147 1 1 806 608 227 22 15 chr13 28996872 28997006 -91287306 - B1_Mur1 SINE Alu -5 144 10 1 806 266 250 11 116 chr13 28996931 28997026 -91287286 - MT2B LTR ERVL -362 239 155 1 806 196 364 90 25 chr13 28997221 28997500 -91286812 + L4 LINE RTE 1539 1835 -194 1 806 342 301 87 0 chr13 28997939 28998042 -91286270 - PB1D7 SINE Alu -8 112 1 1 806 1147 65 0 0 chr13 28998481 28998619 -91285693 - B1_Mm SINE Alu -9 138 1 1 806 302 277 12 35 chr13 28998709 28998795 -91285517 + G-rich Low_complexity Low_complexity 3 86 0 1 806 570 278 10 62 chr13 28999310 28999502 -91284810 + ID_B1 SINE B4 28 209 -15 1 806 372 280 0 0 chr13 28999503 28999596 -91284716 + ID_B1 SINE B4 130 222 -2 1 806 301 259 161 0 chr13 29000000 29000081 -91284231 - PB1D10 SINE Alu -23 94 1 1 806 312 356 25 76 chr13 29000236 29000394 -91283918 + RSINE1 SINE B4 16 165 0 2 806 207 186 0 0 chr13 29000511 29000554 -91283758 + C-rich Low_complexity Low_complexity 1 43 0 3 806 234 161 35 18 chr13 29000555 29000612 -91283700 + CT-rich Low_complexity Low_complexity 1 58 0 4 806 1798 157 71 34 chr13 29000737 29001087 -91283225 - MTC LTR MaLR -1 420 58 5 806 435 301 32 8 chr13 29001113 29001237 -91283075 - ID_B1 SINE B4 -16 208 82 6 806 255 186 53 0 chr13 29001442 29001555 -91282757 + (CGTG)n Simple_repeat Simple_repeat 1 119 0 7 806 933 191 12 108 chr13 29001588 29001846 -91282466 + RMER1C Other Other 1110 1342 0 8 806 1172 62 7 0 chr13 29001858 29002003 -91282309 + B1_Mm SINE Alu 2 147 0 9 806 368 247 125 168 chr13 29002123 29002420 -91281892 + RMER10A LTR ERVL 15 298 -144 1 806 346 280 14 129 chr13 29002451 29002660 -91281652 + RMER10A LTR ERVL 257 441 -1 1 806 329 229 12 79 chr13 29002700 29002793 -91281519 + PB1D10 SINE Alu 21 120 0 1 806 247 284 108 0 chr13 29002802 29002876 -91281436 + ID SINE ID 2 83 -141 1 806 230 260 91 68 chr13 29002876 29002889 -91281423 + BC1_Mm scRNA scRNA 2 88 -64 1 806 699 63 306 0 chr13 29002889 29003000 -91281312 + B1_Mm SINE Alu 3 147 0 1 806 230 260 91 68 chr13 29003000 29003044 -91281268 + BC1_Mm scRNA scRNA 89 136 -16 1 806 304 288 108 0 chr13 29003312 29003423 -91280889 + L1M5 LINE L1 3337 3459 -2687 1 806 920 149 186 37 chr13 29003515 29003703 -91280609 - B3 SINE B2 0 216 1 1 806 380 260 163 51 chr13 29003708 29003886 -91280426 - B3A SINE B2 0 198 1 1 806 347 384 35 72 chr13 29003939 29004371 -91279941 + L1M5 LINE L1 3562 3977 -2169 1 806 578 248 23 23 chr13 29004398 29004526 -91279786 + B3 SINE B2 2 129 -87 1 806 180 0 0 0 chr13 29004542 29004562 -91279750 + (A)n Simple_repeat Simple_repeat 1 20 0 1 806 1784 211 55 30 chr13 29004856 29004974 -91279338 - MTD LTR MaLR -14 405 289 2 806 1124 55 7 7 chr13 29004974 29005120 -91279192 + B1_Mus2 SINE Alu 1 146 -1 2 806 1784 209 58 33 chr13 29005120 29005405 -91278907 - MTD LTR MaLR -131 288 1 2 806 582 119 121 154 chr13 29005423 29005572 -91278740 + B1_Mur1 SINE Alu 5 148 -1 2 806 251 255 118 39 chr13 29005603 29005705 -91278607 - PB1 SINE Alu -4 123 14 2 806 434 306 57 17 chr13 29005964 29006140 -91278172 + B3A SINE B2 1 183 -15 2 806 29 0 0 0 chr13 29006151 29006180 -91278132 + AT_rich Low_complexity Low_complexity 1 29 0 2 806 240 271 237 0 chr13 29006225 29006343 -91277969 + B1F2 SINE Alu 1 146 -3 2 806 338 269 0 97 chr13 29006258 29006361 -91277951 + ID_B1 SINE B4 132 224 0 2 806 397 340 32 13 chr13 29006361 29006516 -91277796 + ID_B1 SINE B4 10 167 -57 2 806 857 163 7 28 chr13 29006536 29006681 -91277631 + B1_Mus2 SINE Alu 6 147 0 2 806 254 195 0 0 chr13 29006710 29006751 -91277561 + ID_B1 SINE B4 181 221 -3 3 806 671 151 8 0 chr13 29006754 29006880 -91277432 + GA-rich Low_complexity Low_complexity 2 128 0 3 806 621 226 64 81 chr13 29007040 29007213 -91277099 + B3 SINE B2 2 171 -45 3 806 364 272 492 77 chr13 29007669 29007852 -91276460 + B4A SINE B4 34 292 0 3 806 1360 232 125 15 chr13 29007922 29008259 -91276053 + ORR1D1 LTR MaLR 1 374 0 3 806 423 0 0 0 chr13 29008276 29008323 -91275989 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 806 685 271 0 49 chr13 29008623 29008786 -91275526 - RSINE1 SINE B4 -8 157 3 3 806 414 0 0 0 chr13 29008792 29008838 -91275474 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 806 336 331 37 15 chr13 29009098 29009233 -91275079 - B1F SINE Alu -11 138 1 3 806 377 332 89 59 chr13 29010497 29010734 -91273578 - L4 LINE RTE -148 1881 1638 3 806 740 257 72 5 chr13 29010845 29011052 -91273260 + ID_B1 SINE B4 3 223 -1 4 806 231 250 154 26 chr13 29011245 29011323 -91272989 - Charlie10a DNA MER1_type -3 277 190 4 806 255 186 0 0 chr13 29011375 29011418 -91272894 + PB1D9 SINE Alu 21 63 -57 4 806 343 289 70 0 chr13 29011889 29012003 -91272309 - MTD LTR MaLR 0 419 298 4 806 287 253 144 21 chr13 29011972 29012069 -91272243 - MTD LTR MaLR -309 110 2 4 806 292 167 139 0 chr13 29012212 29012284 -91272028 + Lx8 LINE L1 7386 7467 -6 4 806 22 0 0 0 chr13 29012287 29012309 -91272003 + AT_rich Low_complexity Low_complexity 1 22 0 4 806 281 193 73 24 chr13 29012399 29012564 -91271748 + (TATAA)n Simple_repeat Simple_repeat 5 177 0 4 806 207 312 15 15 chr13 29012671 29012736 -91271576 - MIRm SINE MIR -5 271 207 4 806 923 239 21 5 chr13 29012901 29013094 -91271218 - B3 SINE B2 -13 203 8 4 806 180 314 28 28 chr13 29013233 29013305 -91271007 - L2 LINE L2 -555 2864 2793 4 806 299 257 40 0 chr13 29013307 29013381 -91270931 + ID4_ SINE ID 3 79 -4 5 806 493 356 21 59 chr13 29013438 29013674 -91270638 + Tigger5 DNA MER2_type 8 234 -2172 5 806 572 245 66 75 chr13 29014149 29014361 -91269951 - B3 SINE B2 -6 210 1 5 806 234 261 116 0 chr13 29014630 29014699 -91269613 - ID4_ SINE ID -6 77 1 5 806 973 83 105 0 chr13 29015479 29015612 -91268700 + B1_Mus1 SINE Alu 2 148 0 5 806 206 274 32 116 chr13 29015705 29015800 -91268512 + L2c LINE L2 3297 3383 -4 5 806 698 224 38 6 chr13 29016258 29016340 -91267972 + ID SINE ID 1 87 -137 5 806 285 302 64 36 chr13 29016340 29016450 -91267862 + PB1D7 SINE Alu 3 115 -5 5 806 890 153 15 0 chr13 29016452 29016589 -91267723 + B1_Mur2 SINE Alu 11 149 0 5 806 974 141 0 6 chr13 29016676 29016847 -91267465 + (GGAGAA)n Simple_repeat Simple_repeat 6 175 0 5 806 22 56 0 0 chr13 29017240 29017276 -91267036 + AT_rich Low_complexity Low_complexity 1 36 0 6 806 357 265 71 0 chr13 29017328 29017411 -91266901 + ID_B1 SINE B4 119 208 -16 6 806 798 41 0 0 chr13 29017411 29017509 -91266803 + (TG)n Simple_repeat Simple_repeat 2 99 0 6 806 357 265 71 0 chr13 29017509 29017523 -91266789 + ID_B1 SINE B4 209 222 -2 6 806 205 277 71 24 chr13 29017699 29017784 -91266528 - MIRb SINE MIR -71 197 109 6 806 1252 254 65 11 chr13 29017869 29018220 -91266092 - ORR1D2 LTR MaLR 0 370 1 6 806 501 244 137 8 chr13 29018244 29018368 -91265944 + B1_Mur3 SINE Alu 2 141 -8 6 806 264 345 0 0 chr13 29019072 29019157 -91265155 + ID4_ SINE ID 11 95 -57 6 806 242 89 44 0 chr13 29019776 29019821 -91264491 + (TTTTG)n Simple_repeat Simple_repeat 5 51 0 6 806 570 234 88 0 chr13 29019822 29019959 -91264353 - B1F1 SINE Alu 0 149 1 6 806 253 205 269 0 chr13 29020415 29020493 -91263819 - PB1D9 SINE Alu 0 120 22 6 806 535 254 39 0 chr13 29020564 29020694 -91263618 - B1_Mur2 SINE Alu -13 136 2 7 806 702 158 116 36 chr13 29020841 29020979 -91263333 - B1_Mur3 SINE Alu 0 149 1 7 806 382 229 0 44 chr13 29021469 29021652 -91262660 + (CATA)n Simple_repeat Simple_repeat 4 178 0 7 806 226 247 52 124 chr13 29022011 29022108 -91262204 + MT2B LTR ERVL 161 250 -351 7 806 382 267 19 47 chr13 29022026 29022132 -91262180 + PB1D10 SINE Alu 14 116 -1 7 806 676 176 12 0 chr13 29022929 29023094 -91261218 + (TG)n Simple_repeat Simple_repeat 2 168 0 7 806 249 98 24 0 chr13 29023107 29023148 -91261164 - B4 SINE B4 -221 71 30 7 806 248 70 23 0 chr13 29023707 29023750 -91260562 + (CAA)n Simple_repeat Simple_repeat 2 45 0 7 806 494 43 0 14 chr13 29023966 29024036 -91260276 + (TG)n Simple_repeat Simple_repeat 1 69 0 7 806 379 73 29 0 chr13 29024203 29024271 -91260041 + (TGG)n Simple_repeat Simple_repeat 3 72 0 7 806 569 308 7 14 chr13 29024892 29025037 -91259275 - RSINE1 SINE B4 -14 151 8 8 806 816 298 19 5 chr13 29025060 29025266 -91259046 - ID_B1 SINE B4 0 224 16 8 806 408 182 0 0 chr13 29026059 29026147 -91258165 + CT-rich Low_complexity Low_complexity 2 89 0 8 806 494 237 83 2 chr13 29026537 29026677 -91257635 - B1F1 SINE Alu -1 148 1 8 806 370 303 123 62 chr13 29026677 29026744 -91257568 - ID_B1 SINE B4 0 220 1 8 806 363 271 35 12 chr13 29026776 29026862 -91257450 - B1F1 SINE Alu -52 97 10 8 806 683 232 137 15 chr13 29026878 29027075 -91257237 - ID_B1 SINE B4 -3 221 1 8 806 216 253 0 48 chr13 29028320 29028378 -91255934 + polypyrimidine Low_complexity Low_complexity 26 79 0 8 806 1292 68 0 6 chr13 29028378 29028555 -91255757 + (TTCCC)n Simple_repeat Simple_repeat 2 177 0 8 806 216 253 0 48 chr13 29028555 29028579 -91255733 + polypyrimidine Low_complexity Low_complexity 2 25 0 8 806 279 0 0 0 chr13 29028814 29028845 -91255467 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 806 240 268 70 0 chr13 29028868 29028939 -91255373 - B4A SINE B4 -1 291 216 9 806 536 229 10 0 chr13 29028953 29029049 -91255263 - B1_Mur2 SINE Alu -21 128 32 9 806 981 255 32 5 chr13 29029058 29029275 -91255037 - B4A SINE B4 -62 230 8 9 806 1129 62 14 0 chr13 29029385 29029529 -91254783 - B1_Mm SINE Alu 0 147 2 9 806 889 140 7 14 chr13 29029749 29029887 -91254425 + B1_Mur2 SINE Alu 1 137 -12 9 806 707 210 68 34 chr13 29030100 29030307 -91254005 + B3 SINE B2 1 214 -2 9 806 21 0 0 0 chr13 29030309 29030330 -91253982 + AT_rich Low_complexity Low_complexity 1 21 0 9 806 324 0 0 0 chr13 29030363 29030399 -91253913 + (TG)n Simple_repeat Simple_repeat 2 37 0 9 806 1138 82 0 0 chr13 29030451 29030597 -91253715 + B1_Mus2 SINE Alu 2 147 0 9 806 1195 22 22 0 chr13 29031627 29031766 -91252546 + B1_Mm SINE Alu 1 142 -5 9 806 427 250 234 18 chr13 29032480 29032651 -91251661 + ID_B1 SINE B4 2 209 -15 1 806 552 219 76 0 chr13 29033006 29033111 -91251201 - B1_Mur2 SINE Alu -36 113 1 1 806 297 0 0 0 chr13 29033296 29033329 -91250983 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 806 382 282 36 101 chr13 29033340 29033478 -91250834 - B3A SINE B2 -43 155 27 1 806 1250 20 0 7 chr13 29033514 29033661 -91250651 + B1_Mm SINE Alu 2 147 0 1 806 306 0 0 0 chr13 29033661 29033695 -91250617 + (A)n Simple_repeat Simple_repeat 1 34 0 1 806 429 276 19 28 chr13 29033695 29033803 -91250509 - ID_B1 SINE B4 -13 211 105 1 806 355 309 48 0 chr13 29033803 29033821 -91250491 - B1F SINE Alu -13 136 5 1 806 282 116 0 0 chr13 29034392 29034435 -91249877 + (TCCC)n Simple_repeat Simple_repeat 2 44 0 1 806 378 0 0 0 chr13 29035212 29035254 -91249058 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 806 195 192 13 27 chr13 29035453 29035528 -91248784 + T-rich Low_complexity Low_complexity 2 75 0 1 806 824 177 7 26 chr13 29035529 29035680 -91248632 - B1_Mus1 SINE Alu 0 148 1 1 806 426 248 97 76 chr13 29035683 29035827 -91248485 - B1F2 SINE Alu 0 149 3 1 806 355 197 0 14 chr13 29035914 29035986 -91248326 - ID4 SINE ID -10 73 3 1 806 236 250 0 70 chr13 29036196 29036282 -91248030 + Lx8 LINE L1 7391 7470 -3 1 806 27 0 0 0 chr13 29036282 29036309 -91248003 + AT_rich Low_complexity Low_complexity 1 27 0 1 806 221 277 77 0 chr13 29036316 29036381 -91247931 + ID4_ SINE ID 3 72 -11 1 806 378 0 0 0 chr13 29036383 29036425 -91247887 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 806 330 291 125 58 chr13 29036438 29036646 -91247666 - ID_B1 SINE B4 0 224 3 1 806 367 367 52 17 chr13 29036790 29037023 -91247289 - MIRb SINE MIR -6 262 22 1 806 459 195 61 0 chr13 29037149 29037231 -91247081 - B1_Mur2 SINE Alu -26 123 37 1 806 353 305 78 18 chr13 29037697 29037864 -91246448 + B3A SINE B2 4 180 -18 1 806 1676 31 0 0 chr13 29037900 29038092 -91246220 + B2_Mm1t SINE B2 2 193 0 1 806 204 67 0 0 chr13 29038093 29038123 -91246189 + (A)n Simple_repeat Simple_repeat 1 30 0 1 806 379 283 35 28 chr13 29038296 29038438 -91245874 + B1_Mus2 SINE Alu 5 147 0 1 806 189 0 0 0 chr13 29038621 29038642 -91245670 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1 806 239 303 0 26 chr13 29038951 29039029 -91245283 - ID_B1 SINE B4 -124 100 25 1 806 249 258 8 50 chr13 29038961 29039048 -91245264 - BC1_Mm scRNA scRNA -63 89 3 1 806 285 244 43 43 chr13 29039260 29039354 -91244958 - PB1D10 SINE Alu 0 117 24 1 806 327 231 112 103 chr13 29040125 29040241 -91244071 - PB1D10 SINE Alu -30 117 1 1 806 258 95 0 0 chr13 29040928 29040970 -91243342 + (T)n Simple_repeat Simple_repeat 1 42 0 1 806 198 143 0 0 chr13 29041028 29041063 -91243249 + (A)n Simple_repeat Simple_repeat 1 35 0 1 806 28 0 0 0 chr13 29041512 29041540 -91242772 + AT_rich Low_complexity Low_complexity 1 28 0 1 806 22 0 0 0 chr13 29041860 29041882 -91242430 + AT_rich Low_complexity Low_complexity 1 22 0 1 806 248 234 0 11 chr13 29041940 29042035 -91242277 + A-rich Low_complexity Low_complexity 3 96 0 1 806 24 32 0 0 chr13 29042583 29042614 -91241698 + AT_rich Low_complexity Low_complexity 1 31 0 1 806 258 214 0 0 chr13 29043430 29043514 -91240798 + T-rich Low_complexity Low_complexity 1 84 0 1 806 186 143 0 0 chr13 29043817 29043852 -91240460 + (GGA)n Simple_repeat Simple_repeat 2 36 0 1 806 23 54 0 0 chr13 29044986 29045023 -91239289 + GC_rich Low_complexity Low_complexity 1 37 0 1 806 198 0 0 0 chr13 29045842 29045864 -91238448 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 806 210 71 0 0 chr13 29045864 29045891 -91238421 + (CG)n Simple_repeat Simple_repeat 2 29 0 1 806 394 263 11 0 chr13 29046973 29047068 -91237244 + ID_B1 SINE B4 91 186 -38 1 806 1227 41 0 0 chr13 29047068 29047214 -91237098 + B1_Mus1 SINE Alu 1 146 -2 1 806 213 65 0 0 chr13 29047771 29047802 -91236510 + (T)n Simple_repeat Simple_repeat 1 31 0 1 806 575 271 13 19 chr13 29048207 29048365 -91235947 - RSINE1 SINE B4 -4 161 5 1 806 280 233 82 82 chr13 29052086 29052184 -91232128 + PB1D7 SINE Alu 13 110 -10 1 806 498 296 7 29 chr13 29052317 29052456 -91231856 - ID_B1 SINE B4 -1 223 88 1 806 651 231 35 7 chr13 29052606 29052750 -91231562 + B1F SINE Alu 2 149 0 1 806 373 298 65 46 chr13 29052797 29052994 -91231318 + B4A SINE B4 16 206 -86 1 806 213 318 0 15 chr13 29053071 29053138 -91231174 + RSINE1 SINE B4 92 157 -8 1 806 216 0 0 0 chr13 29053156 29053180 -91231132 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 806 317 283 43 34 chr13 29053465 29053526 -91230786 - MLT2B4 LTR ERVL -58 498 438 1 806 2625 98 51 29 chr13 29053526 29053938 -91230374 - MTC LTR MaLR 0 421 1 1 806 317 283 43 34 chr13 29053938 29053993 -91230319 - MLT2B4 LTR ERVL -119 437 381 1 806 2869 179 87 96 chr13 29054109 29054967 -91229345 + RMER17D LTR ERVK 9 855 -34 1 806 617 230 58 0 chr13 29054971 29055110 -91229202 - MLT2B4 LTR ERVL -409 147 1 1 806 1303 113 0 36 chr13 29055352 29055545 -91228767 - B2_Mm2 SINE B2 -9 186 1 1 806 396 175 0 0 chr13 29055690 29055787 -91228525 + (TG)n Simple_repeat Simple_repeat 1 97 0 1 806 300 128 0 0 chr13 29055789 29055836 -91228476 - HAL1-3A_ME LINE L1 -840 2018 1972 1 806 516 266 53 75 chr13 29055837 29056024 -91228288 - B4 SINE B4 -96 196 14 1 806 272 286 101 0 chr13 29056103 29056222 -91228090 - MLT2B4 LTR ERVL -400 156 26 1 806 873 161 0 7 chr13 29056599 29056743 -91227569 + B1_Mur2 SINE Alu 5 147 -2 1 806 210 118 0 0 chr13 29056753 29056787 -91227525 + (CATA)n Simple_repeat Simple_repeat 1 34 0 1 806 324 0 0 0 chr13 29056971 29057007 -91227305 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 806 895 251 38 112 chr13 29057023 29057239 -91227073 - B4 SINE B4 -1 291 92 1 806 1189 68 0 0 chr13 29057239 29057386 -91226926 - B1_Mm SINE Alu 0 147 1 1 806 895 251 38 112 chr13 29057386 29057483 -91226829 - B4 SINE B4 -201 91 1 1 806 201 74 0 0 chr13 29057657 29057684 -91226628 + (CCCCCT)n Simple_repeat Simple_repeat 6 32 0 1 806 293 270 0 0 chr13 29057685 29057748 -91226564 - tRNA-Ala-GCY_ tRNA tRNA -8 67 5 1 806 198 0 0 0 chr13 29058191 29058213 -91226099 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 1 806 1272 142 9 5 chr13 29058320 29058539 -91225773 - URR1B DNA MER1_type 0 225 6 1 806 2396 93 187 5 chr13 29058963 29059332 -91224980 - RLTR10C LTR ERVK 0 436 1 1 806 228 219 55 99 chr13 29059703 29059794 -91224518 + L1MEg2 LINE L1 589 675 -5777 1 806 383 277 0 0 chr13 29060038 29060121 -91224191 + ID4 SINE ID 1 83 0 1 806 234 260 8 119 chr13 29060288 29060406 -91223906 + L1MEg2 LINE L1 4086 4190 -3264 1 806 286 265 171 24 chr13 29060455 29060625 -91223687 + L1MEg2 LINE L1 4400 4594 -2860 1 806 917 294 15 48 chr13 29060717 29060988 -91223324 + B4 SINE B4 1 262 -30 1 806 225 226 0 0 chr13 29061019 29061072 -91223240 + (CATA)n Simple_repeat Simple_repeat 1 53 0 1 806 5407 155 78 18 chr13 29061200 29061995 -91222317 + L1_Mur3 LINE L1 289 1148 -6580 1 806 3411 33 8 0 chr13 29061995 29062388 -91221924 + MTA_Mm LTR MaLR 1 396 0 1 806 5407 155 78 18 chr13 29062388 29062454 -91221858 + L1_Mur3 LINE L1 1149 1216 -6512 1 806 207 0 0 0 chr13 29062454 29062477 -91221835 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 806 7357 138 91 29 chr13 29062477 29062989 -91221323 + L1_Mur3 LINE L1 1211 1725 -4155 1 806 1432 49 49 11 chr13 29062989 29063174 -91221138 + B2_Mm1t SINE B2 2 193 0 1 806 7357 137 91 29 chr13 29063174 29064165 -91220147 + L1_Mur3 LINE L1 1726 2802 -3078 1 806 1190 228 101 27 chr13 29064390 29064756 -91219556 - L1MA7 LINE L1 -178 6113 5721 1 806 228 290 0 14 chr13 29064849 29064919 -91219393 - MLT1A1 LTR MaLR -4 404 336 1 806 359 331 39 22 chr13 29065208 29065387 -91218925 - MER58A DNA MER1_type 0 224 43 1 806 417 260 146 0 chr13 29065520 29065643 -91218669 - ID_B1 SINE B4 0 224 84 1 806 306 0 0 0 chr13 29065697 29065731 -91218581 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 806 386 283 102 14 chr13 29066141 29066288 -91218024 + RSINE1 SINE B4 6 165 0 1 806 612 213 0 0 chr13 29067428 29067550 -91216762 + B1_Mur1 SINE Alu 27 148 -1 1 806 232 208 0 0 chr13 29067762 29067810 -91216502 + B4A SINE B4 1 48 -244 1 806 334 203 14 0 chr13 29067838 29067907 -91216405 + B4 SINE B4 149 218 -74 1 806 1109 255 151 39 chr13 29068188 29068625 -91215687 + Lx7 LINE L1 6930 7415 -281 1 806 492 192 0 0 chr13 29068671 29068775 -91215537 + CT-rich Low_complexity Low_complexity 3 106 0 1 806 225 278 42 42 chr13 29068791 29068911 -91215401 + Lx7 LINE L1 7577 7696 0 1 806 933 118 30 0 chr13 29068925 29069060 -91215252 + B1_Mus1 SINE Alu 1 139 -9 1 806 207 186 0 0 chr13 29069262 29069305 -91215007 + (CCA)n Simple_repeat Simple_repeat 1 43 0 1 806 270 304 42 42 chr13 29069584 29069680 -91214632 + ID_B1 SINE B4 81 176 -48 1 806 407 248 37 37 chr13 29069596 29069705 -91214607 + PB1D10 SINE Alu 9 117 0 1 806 416 287 0 0 chr13 29069754 29069862 -91214450 - PB1D7 SINE Alu -10 110 3 1 806 262 295 143 0 chr13 29070121 29070226 -91214086 + Charlie8 DNA MER1_type 403 522 -1906 1 806 400 250 47 19 chr13 29070636 29070742 -91213570 - RSINE1 SINE B4 -4 161 53 1 806 497 274 191 23 chr13 29070862 29071185 -91213127 - MLT1C LTR MaLR 0 467 73 1 806 349 217 18 223 chr13 29071203 29071369 -91212943 + RMER15 LTR ERVL 1 132 -443 1 806 451 312 18 0 chr13 29071411 29071523 -91212789 + RMER15 LTR ERVL 260 373 -202 1 806 809 226 68 0 chr13 29071838 29072015 -91212297 - ID_B1 SINE B4 -27 197 9 1 806 205 172 60 70 chr13 29072099 29072199 -91212113 + (TCTA)n Simple_repeat Simple_repeat 1 99 0 1 806 368 288 46 46 chr13 29072424 29072577 -91211735 + LTR16C LTR ERVL 337 489 0 1 806 180 0 0 0 chr13 29072815 29072835 -91211477 + (C)n Simple_repeat Simple_repeat 1 20 0 1 806 264 184 53 35 chr13 29073019 29073188 -91211124 + CT-rich Low_complexity Low_complexity 3 174 0 2 806 1253 103 16 46 chr13 29073390 29073584 -91210728 + B2_Mm2 SINE B2 2 189 -6 2 806 482 203 168 8 chr13 29073685 29073804 -91210508 + B3A SINE B2 1 138 -60 2 806 423 0 0 0 chr13 29073844 29073891 -91210421 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 806 2948 64 0 11 chr13 29073969 29074349 -91209963 + L1Md_F2 LINE L1 6203 6578 -4 2 806 591 262 51 51 chr13 29074386 29074583 -91209729 - B3A SINE B2 0 198 2 2 806 937 134 7 13 chr13 29074608 29074759 -91209553 - B1_Mur4 SINE Alu 0 150 1 2 806 567 258 56 6 chr13 29074793 29074994 -91209318 - L1MA8 LINE L1 -2 6289 6087 2 806 251 239 234 22 chr13 29075130 29075267 -91209045 - B2_Mm2 SINE B2 -14 181 16 2 806 313 289 48 12 chr13 29075194 29075278 -91209034 - RSINE1 SINE B4 -77 88 2 2 806 669 236 79 20 chr13 29075597 29075800 -91208512 - B3 SINE B2 -1 215 1 2 806 24 0 0 0 chr13 29075922 29075946 -91208366 + AT_rich Low_complexity Low_complexity 1 24 0 2 806 754 200 29 15 chr13 29075970 29076107 -91208205 + B1_Mur4 SINE Alu 3 141 -9 2 806 273 232 0 0 chr13 29076107 29076176 -91208136 + GA-rich Low_complexity Low_complexity 1 69 0 2 806 468 0 0 0 chr13 29077008 29077060 -91207252 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 806 365 0 22 0 chr13 29077060 29077104 -91207208 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 806 225 191 24 0 chr13 29077104 29077146 -91207166 + GA-rich Low_complexity Low_complexity 4 46 0 2 806 1234 258 71 56 chr13 29077833 29078243 -91206069 - Lx8 LINE L1 -3 7470 7055 2 806 193 244 161 11 chr13 29078342 29078429 -91205883 + L2c LINE L2 3054 3153 -234 2 806 1074 144 0 0 chr13 29078770 29078950 -91205362 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 806 949 247 107 0 chr13 29079342 29079605 -91204707 - B4A SINE B4 0 292 2 2 806 531 112 0 0 chr13 29079616 29079696 -91204616 + (TCCC)n Simple_repeat Simple_repeat 4 83 0 2 806 265 287 52 61 chr13 29079703 29079818 -91204494 - PB1D10 SINE Alu -3 114 1 2 806 1963 164 76 15 chr13 29079920 29080315 -91203997 - MTD LTR MaLR 0 419 1 2 806 1317 94 112 10 chr13 29081199 29081404 -91202908 - URR1A DNA MER1_type 0 226 1 2 806 204 286 0 0 chr13 29081653 29081695 -91202617 + polypurine Low_complexity Low_complexity 2 43 0 2 806 25 0 0 0 chr13 29082086 29082111 -91202201 + AT_rich Low_complexity Low_complexity 1 25 0 2 806 1071 201 14 33 chr13 29082118 29082329 -91201983 + B3 SINE B2 1 207 -9 2 806 1247 28 0 0 chr13 29082337 29082478 -91201834 + B1_Mm SINE Alu 1 141 -6 2 806 192 40 0 0 chr13 29082480 29082505 -91201807 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 2 806 417 271 8 8 chr13 29082657 29082780 -91201532 + B3 SINE B2 1 123 -93 2 806 740 188 65 0 chr13 29082845 29082983 -91201329 - B1_Mus1 SINE Alu 0 148 2 2 806 219 69 0 0 chr13 29082997 29083026 -91201286 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 2 806 221 197 0 16 chr13 29083929 29083991 -91200321 + GA-rich Low_complexity Low_complexity 3 63 0 2 806 1113 84 0 0 chr13 29085005 29085159 -91199153 + (TCC)n Simple_repeat Simple_repeat 1 154 0 2 806 1403 62 17 0 chr13 29085162 29085339 -91198973 - B2_Mm2 SINE B2 -13 182 3 2 806 6181 164 45 19 chr13 29085342 29086379 -91197933 - L1_Mur3 LINE L1 -1693 4187 3134 2 806 639 121 0 0 chr13 29086379 29086478 -91197834 + (TCTA)n Simple_repeat Simple_repeat 1 99 0 2 806 1108 95 0 0 chr13 29086479 29086626 -91197686 - B1_Mus1 SINE Alu -1 147 1 2 806 6181 164 45 19 chr13 29086626 29086848 -91197464 - L1_Mur3 LINE L1 -2747 3133 2893 2 806 920 115 6 25 chr13 29086848 29087008 -91197304 - ORR1C1 LTR MaLR -219 159 3 2 806 4237 159 69 26 chr13 29087012 29087923 -91196389 - L1_Mur3 LINE L1 -3475 2405 1456 2 806 2440 226 96 29 chr13 29087919 29088640 -91195672 - L1_Mur3 LINE L1 -6483 1245 477 2 806 2042 216 53 148 chr13 29088645 29089320 -91194992 - RMER19C LTR ERVK 0 611 1 2 806 820 278 55 9 chr13 29089321 29089539 -91194773 - B4A SINE B4 -62 230 3 2 806 21 36 0 0 chr13 29089564 29089592 -91194720 + AT_rich Low_complexity Low_complexity 1 28 0 2 806 285 29 0 0 chr13 29089598 29089632 -91194680 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 806 525 321 0 0 chr13 29089633 29089767 -91194545 - RSINE1 SINE B4 -21 144 11 2 806 269 26 26 0 chr13 29089951 29089989 -91194323 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 806 1091 36 72 7 chr13 29089991 29090129 -91194183 - B1_Mus1 SINE Alu -1 147 1 2 806 515 324 20 0 chr13 29090512 29090660 -91193652 + ID_B1 SINE B4 70 220 -4 2 806 1186 249 107 39 chr13 29090970 29091325 -91192987 + MTEa LTR MaLR 1 379 0 2 806 698 221 20 7 chr13 29091638 29091784 -91192528 + B1_Mur3 SINE Alu 1 148 -1 2 806 846 255 100 22 chr13 29091901 29092170 -91192142 - B4 SINE B4 -1 291 2 2 806 324 146 0 0 chr13 29093170 29093225 -91191087 + ORR1C2 LTR MaLR 5 59 -362 2 806 500 0 17 0 chr13 29093232 29093292 -91191020 + (TTTTG)n Simple_repeat Simple_repeat 2 62 0 2 806 1075 77 0 14 chr13 29093292 29093429 -91190883 - B1_Mus1 SINE Alu -11 137 1 2 806 304 192 35 82 chr13 29093429 29093458 -91190854 + ORR1C2 LTR MaLR 60 85 -334 2 806 745 185 13 20 chr13 29093470 29093619 -91190693 + ORR1C2 LTR MaLR 235 382 -2 2 806 202 176 39 19 chr13 29093774 29093826 -91190486 + GA-rich Low_complexity Low_complexity 2 54 0 2 806 1906 210 61 2 chr13 29094058 29094454 -91189858 + MTD LTR MaLR 1 419 0 2 806 4216 136 41 9 chr13 29094888 29095621 -91188691 - RMER6A LTR ERVK 0 756 1 2 806 469 199 0 87 chr13 29095903 29096041 -91188271 + B1_Mur1 SINE Alu 24 149 0 2 806 259 301 36 12 chr13 29096252 29096336 -91187976 + RMER30 DNA MER1_type 2 87 -115 2 806 476 284 94 52 chr13 29096474 29096686 -91187626 - MER2 DNA MER2_type -3 342 122 2 806 308 313 0 0 chr13 29096998 29097081 -91187231 - ID4_ SINE ID 0 83 1 2 100 421 254 35 0 chr13 29097890 29098032 -91186280 - MER2 DNA MER2_type -110 235 89 2 807 207 342 26 26 chr13 29098494 29098608 -91185704 - MIRc SINE MIR -113 155 42 2 807 251 296 14 0 chr13 29098727 29098798 -91185514 - MER63B DNA AcHobo -44 392 321 2 807 23 33 0 0 chr13 29099121 29099151 -91185161 + AT_rich Low_complexity Low_complexity 1 30 0 2 807 180 0 0 0 chr13 29099198 29099218 -91185094 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 807 265 284 21 21 chr13 29099445 29099542 -91184770 + Charlie4 DNA MER1_type 1830 1926 -35 2 807 558 0 0 0 chr13 29099566 29099628 -91184684 + (GGA)n Simple_repeat Simple_repeat 2 63 0 2 807 546 119 0 0 chr13 29100174 29100258 -91184054 + (TC)n Simple_repeat Simple_repeat 1 84 0 2 807 288 268 47 93 chr13 29100264 29100371 -91183941 - PB1D7 SINE Alu -18 102 1 2 807 226 241 0 0 chr13 29100955 29101013 -91183299 + A-rich Low_complexity Low_complexity 1 58 0 2 807 5154 117 30 2 chr13 29101064 29101885 -91182427 - L1_Mm LINE L1 -1487 4396 3556 2 807 3614 100 0 8 chr13 29101885 29102429 -91181883 + L1_Mus4 LINE L1 6137 6636 0 2 807 1813 213 74 80 chr13 29102439 29102521 -91181791 + Lx7 LINE L1 6957 7042 -654 2 807 1481 220 231 24 chr13 29102521 29103023 -91181289 + RMER19C LTR ERVK 2 607 -4 2 807 1813 213 74 80 chr13 29103023 29103231 -91181081 + Lx7 LINE L1 7043 7243 -453 2 807 2102 102 21 50 chr13 29103231 29103570 -91180742 - ORR1A4 LTR MaLR 0 329 1 2 807 1813 213 74 80 chr13 29103570 29103657 -91180655 + Lx7 LINE L1 7244 7325 -371 2 807 536 42 14 0 chr13 29103657 29103728 -91180584 + (TC)n Simple_repeat Simple_repeat 2 73 0 2 807 1813 213 74 80 chr13 29103728 29103814 -91180498 + Lx7 LINE L1 7326 7415 -281 2 807 288 0 0 0 chr13 29103814 29103846 -91180466 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 807 1813 254 81 43 chr13 29103846 29104029 -91180283 + Lx7 LINE L1 7416 7691 -5 2 807 396 0 0 0 chr13 29104097 29104141 -91180171 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 807 786 289 0 5 chr13 29104615 29104824 -91179488 - ID_B1 SINE B4 -3 221 14 2 807 315 0 0 0 chr13 29107077 29107112 -91177200 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 807 207 0 0 0 chr13 29107112 29107134 -91177178 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 807 255 215 0 0 chr13 29108098 29108163 -91176149 + (CGTG)n Simple_repeat Simple_repeat 4 68 0 2 807 207 69 0 0 chr13 29109919 29109948 -91174364 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 807 450 214 151 97 chr13 29110585 29110771 -91173541 - B3A SINE B2 -1 197 2 2 807 318 207 75 33 chr13 29110971 29111091 -91173221 - L1ME2z LINE L1 -156 6288 6164 2 807 477 0 0 0 chr13 29111623 29111676 -91172636 + (CAAAC)n Simple_repeat Simple_repeat 2 54 0 2 807 218 224 20 0 chr13 29111991 29112040 -91172272 - PB1D9 SINE Alu -44 76 27 2 807 188 148 16 47 chr13 29112044 29112108 -91172204 + CT-rich Low_complexity Low_complexity 5 66 0 2 807 273 300 14 0 chr13 29112164 29112234 -91172078 - ID4 SINE ID -11 72 2 2 807 256 312 25 0 chr13 29112670 29112750 -91171562 + MIR SINE MIR 26 107 -155 2 807 1116 45 0 0 chr13 29113151 29113284 -91171028 + B1_Mm SINE Alu 3 135 -12 2 807 253 0 54 0 chr13 29113285 29113322 -91170990 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 807 204 40 0 0 chr13 29113574 29113599 -91170713 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 807 342 267 0 13 chr13 29114260 29114336 -91169976 + ID4_ SINE ID 2 76 -7 2 807 291 54 0 0 chr13 29114338 29114375 -91169937 + (CTAA)n Simple_repeat Simple_repeat 3 39 0 2 807 394 257 98 92 chr13 29114426 29114589 -91169723 + RSINE1 SINE B4 2 165 0 2 807 249 33 0 0 chr13 29114597 29114627 -91169685 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 807 330 247 25 0 chr13 29114633 29114714 -91169598 + RSINE1 SINE B4 3 85 -80 2 807 430 212 0 12 chr13 29115033 29115114 -91169198 - ID4_ SINE ID 0 83 4 2 807 180 355 0 27 chr13 29116452 29116562 -91167750 + MIRb SINE MIR 86 192 -76 3 807 218 265 15 0 chr13 29117090 29117158 -91167154 - ID4 SINE ID -10 73 5 3 807 414 295 112 29 chr13 29117564 29117770 -91166542 + ID_B1 SINE B4 2 224 0 3 807 429 20 0 0 chr13 29117876 29117926 -91166386 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 807 641 261 7 60 chr13 29118227 29118378 -91165934 + RSINE1 SINE B4 4 146 -19 3 807 947 143 7 20 chr13 29118487 29118637 -91165675 + B1_Mus1 SINE Alu 1 148 0 3 807 343 277 69 0 chr13 29118690 29118791 -91165521 + RSINE1 SINE B4 3 110 -55 3 807 393 70 0 0 chr13 29118859 29118916 -91165396 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 807 736 220 197 6 chr13 29118977 29119155 -91165157 - B3 SINE B2 -3 213 2 3 807 405 116 0 0 chr13 29119451 29119520 -91164792 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 807 404 278 278 0 chr13 29119539 29119708 -91164604 - ID_B1 SINE B4 -7 217 2 3 807 540 0 0 0 chr13 29119749 29119809 -91164503 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 3 807 287 337 10 58 chr13 29119836 29119940 -91164372 - RSINE1 SINE B4 -2 163 65 3 807 31 0 0 0 chr13 29120845 29120876 -91163436 + AT_rich Low_complexity Low_complexity 1 31 0 3 807 264 286 117 0 chr13 29120901 29120978 -91163334 + B3A SINE B2 29 114 -84 3 807 288 53 0 0 chr13 29120997 29121035 -91163277 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 807 288 77 0 0 chr13 29121035 29121073 -91163239 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3 807 357 293 8 49 chr13 29121124 29121246 -91163066 + ID_B1 SINE B4 81 197 -27 3 807 542 211 9 18 chr13 29121143 29121254 -91163058 + B1F SINE Alu 18 127 -22 3 807 269 261 43 17 chr13 29121379 29121496 -91162816 + L1MC4 LINE L1 6877 6996 -1046 3 807 369 0 0 0 chr13 29121807 29121848 -91162464 + (CTCTG)n Simple_repeat Simple_repeat 2 42 0 3 807 242 317 25 83 chr13 29121946 29122187 -91162125 + L1MC4 LINE L1 7665 7891 -151 3 807 272 378 0 0 chr13 29122256 29122375 -91161937 + PB1D7 SINE Alu 1 119 -1 3 807 559 231 171 6 chr13 29122490 29122660 -91161652 - B3 SINE B2 -5 211 14 3 807 436 211 58 79 chr13 29122798 29122937 -91161375 - MTEa LTR MaLR -242 137 2 3 807 695 280 46 5 chr13 29122956 29123031 -91161281 + ID SINE ID 6 88 -136 3 807 347 259 102 15 chr13 29123031 29123168 -91161144 + B1F2 SINE Alu 1 149 0 3 807 237 213 16 32 chr13 29123748 29123811 -91160501 - MLT1I LTR MaLR -10 401 340 3 807 279 0 0 0 chr13 29124170 29124201 -91160111 + (T)n Simple_repeat Simple_repeat 1 31 0 3 807 1057 209 179 73 chr13 29125016 29125357 -91158955 - MTE2a LTR MaLR -2 377 1 3 807 520 324 100 26 chr13 29125578 29125847 -91158465 + B4A SINE B4 2 290 -2 3 807 4247 41 2 4 chr13 29127137 29127647 -91156665 - L1Md_F2 LINE L1 0 6582 6074 3 807 290 218 68 19 chr13 29129015 29129118 -91155194 - L1MA5 LINE L1 -23 6277 6170 3 807 191 189 0 19 chr13 29129135 29129189 -91155123 + (TATG)n Simple_repeat Simple_repeat 2 54 0 3 807 713 320 23 35 chr13 29129193 29129449 -91154863 - B4 SINE B4 -1 291 39 3 807 390 326 14 49 chr13 29129517 29129659 -91154653 - B1F SINE Alu -10 139 3 3 807 634 276 51 73 chr13 29129730 29129797 -91154515 - L1MA5 LINE L1 -174 6126 6063 3 807 1045 128 69 6 chr13 29129797 29129970 -91154342 + B2_Mm2 SINE B2 4 187 -8 3 807 634 276 51 73 chr13 29129970 29130257 -91154055 - L1MA5 LINE L1 -238 6062 5780 3 807 243 283 0 0 chr13 29130321 29130381 -91153931 - ID4_ SINE ID -17 66 7 3 807 1482 0 8 4 chr13 29130520 29130756 -91153556 + (TTC)n Simple_repeat Simple_repeat 1 237 0 3 807 275 374 9 0 chr13 29130778 29130885 -91153427 + MIRb SINE MIR 84 191 -77 3 807 1342 269 9 26 chr13 29131608 29131951 -91152361 + MTEb LTR MaLR 22 358 -21 3 807 312 70 0 0 chr13 29132880 29132923 -91151389 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 807 2919 69 23 25 chr13 29133179 29133578 -91150734 + MTB LTR MaLR 3 400 0 3 807 227 321 17 26 chr13 29134248 29134363 -91149949 - L2a LINE L2 0 3426 3313 3 807 896 238 10 5 chr13 29134417 29134611 -91149701 - ID_B1 SINE B4 -17 207 13 3 807 1883 169 72 13 chr13 29134612 29135002 -91149310 + MTC LTR MaLR 1 413 -8 3 807 797 89 41 18 chr13 29135182 29135353 -91148959 + (TCTCCC)n Simple_repeat Simple_repeat 3 177 0 3 807 357 274 147 11 chr13 29135366 29135543 -91148769 - MER57D LTR ERV1 -210 201 1 3 807 598 241 101 72 chr13 29136511 29136856 -91147456 - ORR1E LTR MaLR -2 357 3 3 807 273 89 0 0 chr13 29137275 29137320 -91146992 + (T)n Simple_repeat Simple_repeat 1 45 0 3 807 414 0 0 0 chr13 29137721 29137767 -91146545 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 807 375 41 0 0 chr13 29137767 29137815 -91146497 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 807 226 293 49 29 chr13 29139100 29139202 -91145110 - MIRb SINE MIR -52 216 113 3 807 480 243 140 0 chr13 29139567 29139703 -91144609 + RSINE1 SINE B4 2 156 -9 3 807 22 0 0 0 chr13 29139703 29139725 -91144587 + AT_rich Low_complexity Low_complexity 1 22 0 3 807 1875 208 43 10 chr13 29139763 29140156 -91144156 + RMER1C Other Other 937 1342 0 3 807 536 349 57 15 chr13 29140162 29140427 -91143885 - B4 SINE B4 -4 288 13 3 807 194 292 0 0 chr13 29140502 29140550 -91143762 + MIRm SINE MIR 114 161 -115 3 807 231 36 0 0 chr13 29140924 29140952 -91143360 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 3 807 289 217 0 42 chr13 29140955 29141027 -91143285 - ID4_ SINE ID -13 70 2 3 807 203 0 37 0 chr13 29142240 29142267 -91142045 + (CCCA)n Simple_repeat Simple_repeat 1 28 0 3 807 319 118 35 23 chr13 29142270 29142357 -91141955 + (CA)n Simple_repeat Simple_repeat 1 88 0 3 807 582 341 16 60 chr13 29143427 29143792 -91140520 + MT2A LTR ERVL 35 383 -150 3 807 214 241 23 0 chr13 29143890 29143977 -91140335 + (CATA)n Simple_repeat Simple_repeat 2 90 0 3 807 387 221 0 120 chr13 29144075 29144183 -91140129 + RSINE1 SINE B4 71 165 0 3 807 575 233 0 52 chr13 29144344 29144459 -91139853 + B1_Mur3 SINE Alu 2 114 -35 3 807 1663 190 226 27 chr13 29144459 29144898 -91139414 + RLTR12B LTR ERVK 3 528 0 3 807 575 233 0 52 chr13 29144898 29144936 -91139376 + B1_Mur3 SINE Alu 115 147 -2 3 807 1808 145 73 9 chr13 29145078 29145406 -91138906 + MTB_Mm LTR MaLR 3 351 -56 3 807 315 0 0 0 chr13 29145498 29145533 -91138779 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 807 1162 235 28 177 chr13 29145838 29146273 -91138039 + ORR1D2 LTR MaLR 1 370 0 3 807 1119 261 58 53 chr13 29146277 29146683 -91137629 + MTD LTR MaLR 20 405 -14 3 807 342 98 0 0 chr13 29146976 29147027 -91137285 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 807 219 226 0 0 chr13 29147248 29147301 -91137011 + (CAAA)n Simple_repeat Simple_repeat 4 56 0 3 807 330 252 65 0 chr13 29147347 29147443 -91136869 + PB1D7 SINE Alu 5 107 -13 3 807 345 47 0 0 chr13 29147443 29147486 -91136826 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 807 1243 160 4 30 chr13 29148237 29148469 -91135843 + URR1A DNA MER1_type 1 226 0 3 807 230 22 102 61 chr13 29148579 29148628 -91135684 - PB1D10 SINE Alu 0 117 67 3 807 617 185 17 0 chr13 29148584 29148703 -91135609 - ID_B1 SINE B4 -2 222 102 3 807 765 259 85 33 chr13 29148758 29149029 -91135283 - B4A SINE B4 -6 286 2 3 807 189 0 0 0 chr13 29149622 29149643 -91134669 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 807 468 77 0 0 chr13 29149643 29149708 -91134604 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 807 548 287 0 40 chr13 29149709 29149858 -91134454 - RSINE1 SINE B4 -14 151 9 3 807 245 246 0 0 chr13 29150836 29150893 -91133419 + A-rich Low_complexity Low_complexity 5 61 0 3 807 1117 264 86 14 chr13 29152825 29153175 -91131137 + MTE2b LTR MaLR 1 375 -4 3 807 185 242 182 0 chr13 29153185 29153251 -91131061 - MIRc SINE MIR -106 162 85 3 807 1143 105 77 11 chr13 29153458 29153641 -91130671 - B2_Mm2 SINE B2 0 195 1 3 807 879 282 18 4 chr13 29153641 29153869 -91130443 - B4A SINE B4 -61 231 1 3 807 656 313 94 79 chr13 29154174 29154514 -91129798 + ORR1E LTR MaLR 15 359 0 3 807 226 292 62 97 chr13 29154700 29154844 -91129468 + ID_B1 SINE B4 2 140 -84 3 807 581 275 58 83 chr13 29154918 29155160 -91129152 + MLT1B LTR MaLR 155 390 0 3 807 780 239 6 17 chr13 29156083 29156262 -91128050 + B3A SINE B2 1 177 -21 3 807 344 230 0 83 chr13 29156300 29156409 -91127903 + Lx7 LINE L1 7268 7367 -329 3 807 968 182 193 0 chr13 29156448 29156629 -91127683 - B3 SINE B2 0 216 1 3 807 38763 32 2 0 chr13 29156686 29164826 -91119486 - L1Md_T LINE L1 0 6585 1 3 807 403 227 53 78 chr13 29164827 29165063 -91119249 + Lx7 LINE L1 7258 7538 -158 3 807 586 158 12 35 chr13 29165088 29165258 -91119054 + CT-rich Low_complexity Low_complexity 3 168 0 3 807 437 238 10 19 chr13 29165613 29165716 -91118596 - B3A SINE B2 -96 102 1 3 807 472 296 56 5 chr13 29165740 29165937 -91118375 - MER45B DNA Tip100 -533 507 301 3 807 524 329 59 14 chr13 29165987 29166209 -91118103 + Tigger5 DNA MER2_type 2 233 -2173 3 807 336 336 0 9 chr13 29166206 29166314 -91117998 + Tigger5 DNA MER2_type 2291 2397 -9 3 807 381 359 72 5 chr13 29166363 29166556 -91117756 - MER45B DNA Tip100 -822 218 13 3 807 311 0 26 0 chr13 29166815 29166854 -91117458 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 807 423 251 33 5 chr13 29166877 29167017 -91117295 + MLT1B LTR MaLR 53 198 -269 3 807 592 314 58 67 chr13 29167057 29167418 -91116894 - MLT1A LTR MaLR -16 358 1 3 807 724 305 68 12 chr13 29168054 29168392 -91115920 + L1MB7 LINE L1 5783 6139 -45 4 807 450 0 0 0 chr13 29168827 29168877 -91115435 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 4 807 257 118 0 19 chr13 29169363 29169415 -91114897 + (GAAA)n Simple_repeat Simple_repeat 4 54 0 4 807 207 0 0 0 chr13 29169520 29169543 -91114769 + (A)n Simple_repeat Simple_repeat 1 23 0 4 807 183 297 78 43 chr13 29170522 29170638 -91113674 - L2a LINE L2 -17 3409 3290 4 807 420 20 0 0 chr13 29171065 29171114 -91113198 + (CCA)n Simple_repeat Simple_repeat 1 49 0 4 807 694 184 22 0 chr13 29171114 29171250 -91113062 - B1F SINE Alu -7 142 4 4 807 185 377 30 15 chr13 29171263 29171395 -91112917 - L2a LINE L2 -608 2811 2678 4 807 783 232 127 4 chr13 29171395 29171624 -91112688 + B4A SINE B4 36 292 0 4 807 230 351 22 22 chr13 29171806 29171940 -91112372 - L2a LINE L2 -859 2560 2427 4 807 267 104 0 0 chr13 29172486 29172534 -91111778 + (A)n Simple_repeat Simple_repeat 1 48 0 4 807 908 240 9 65 chr13 29173654 29173886 -91110426 + MER20 DNA MER1_type 1 219 0 4 807 738 0 0 0 chr13 29174578 29174660 -91109652 + (TTCC)n Simple_repeat Simple_repeat 4 85 0 4 807 650 239 159 0 chr13 29174766 29174942 -91109370 - ID_B1 SINE B4 -16 208 5 4 807 913 81 0 0 chr13 29174989 29175113 -91109199 - B1_Mus1 SINE Alu 0 148 25 4 807 180 0 0 0 chr13 29175429 29175449 -91108863 + (A)n Simple_repeat Simple_repeat 1 20 0 4 807 280 313 11 46 chr13 29176239 29176326 -91107986 + B4A SINE B4 109 192 -100 4 807 288 0 0 0 chr13 29176389 29176421 -91107891 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 807 7427 60 6 8 chr13 29177408 29178344 -91105968 + L1Md_F2 LINE L1 5648 6582 0 4 807 255 273 0 0 chr13 29178711 29178777 -91105535 + (CA)n Simple_repeat Simple_repeat 1 66 0 4 807 996 165 70 0 chr13 29178951 29179151 -91105161 + ORR1D1 LTR MaLR 1 214 -160 4 807 26 74 0 0 chr13 29179307 29179361 -91104951 + AT_rich Low_complexity Low_complexity 1 54 0 4 807 526 291 0 31 chr13 29179513 29179531 -91104781 - RSINE1 SINE B4 -6 159 142 4 807 422 36 18 0 chr13 29179531 29179587 -91104725 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 807 526 291 0 31 chr13 29179587 29179731 -91104581 - RSINE1 SINE B4 -24 141 2 4 807 263 177 16 0 chr13 29179831 29179893 -91104419 + GA-rich Low_complexity Low_complexity 2 64 0 4 807 475 298 30 30 chr13 29179977 29180152 -91104160 + Lx8 LINE L1 7111 7414 -230 4 807 459 0 0 0 chr13 29180323 29180374 -91103938 + (TA)n Simple_repeat Simple_repeat 2 52 0 4 807 3733 141 102 8 chr13 29180425 29181081 -91103231 + RMER6D LTR ERVK 1 718 -2 4 807 1808 176 76 23 chr13 29181380 29181715 -91102597 + MTC LTR MaLR 5 365 -56 4 807 1986 154 10 69 chr13 29181715 29182105 -91102207 - ORR1B2 LTR MaLR 0 367 1 4 807 1808 176 76 23 chr13 29182105 29182165 -91102147 + MTC LTR MaLR 366 421 0 4 807 841 271 40 24 chr13 29182532 29182785 -91101527 - MTEa LTR MaLR -9 370 114 4 807 1126 225 44 7 chr13 29183199 29183472 -91100840 - ORR1D1 LTR MaLR -6 368 86 4 807 1360 42 0 0 chr13 29184338 29184530 -91099782 - L1_Mus1 LINE L1 0 6567 6392 4 807 1987 51 0 8 chr13 29184530 29184769 -91099543 - L1_Mus1 LINE L1 -351 6216 5980 4 807 214 211 0 0 chr13 29185909 29185947 -91098365 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 4 807 784 246 40 77 chr13 29185947 29186194 -91098118 + B4 SINE B4 43 280 -12 4 807 354 45 0 0 chr13 29186230 29186274 -91098038 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 807 341 338 2 30 chr13 29186286 29186416 -91097896 + PB1D10 SINE Alu 1 118 -31 4 807 397 249 272 27 chr13 29186510 29186811 -91097501 + HAL1 LINE L1 1352 1726 -781 4 807 590 192 12 64 chr13 29187057 29187229 -91097083 + HAL1 LINE L1 2010 2172 -335 4 807 243 300 48 109 chr13 29187477 29187788 -91096524 - B4 SINE B4 0 292 1 4 807 526 294 29 48 chr13 29188917 29189240 -91095072 + ORR1E LTR MaLR 4 314 -56 4 807 766 45 19 13 chr13 29189470 29189621 -91094691 + B1_Mm SINE Alu 4 150 0 4 807 1171 189 98 37 chr13 29189639 29189936 -91094376 - RLTR46 LTR ERVK -5 315 1 4 807 838 272 65 29 chr13 29189936 29190172 -91094140 + B4 SINE B4 46 290 -2 4 807 612 282 93 12 chr13 29190446 29190704 -91093608 + B4A SINE B4 1 279 -13 4 807 441 0 0 0 chr13 29190715 29190764 -91093548 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 807 812 89 0 0 chr13 29191188 29191300 -91093012 + B2_Mm2 SINE B2 2 113 -82 4 807 6356 172 48 30 chr13 29191327 29193234 -91091078 + Lx2B LINE L1 5043 6998 -2 4 807 416 236 28 28 chr13 29193767 29193876 -91090436 + L1MA6 LINE L1 5888 5996 -304 4 807 1005 33 0 0 chr13 29194462 29194583 -91089729 + (CA)n Simple_repeat Simple_repeat 2 122 0 4 807 197 303 113 16 chr13 29195459 29195583 -91088729 - MIRc SINE MIR -121 147 12 4 807 6838 51 121 1 chr13 29196098 29197037 -91087275 - L1_Mm LINE L1 -2848 3035 1984 4 807 347 81 16 0 chr13 29197037 29197099 -91087213 + L1Md_F3 LINE L1 6519 6581 -3 4 807 286 107 18 18 chr13 29197951 29198008 -91086304 + (TCC)n Simple_repeat Simple_repeat 2 58 0 4 807 267 342 137 0 chr13 29198343 29198489 -91085823 + MER20 DNA MER1_type 4 169 -50 4 807 551 289 12 12 chr13 29198565 29198726 -91085586 + RSINE1 SINE B4 5 165 0 4 807 816 281 52 52 chr13 29199275 29199542 -91084770 + B4 SINE B4 22 288 -4 4 807 270 0 0 0 chr13 29200001 29200031 -91084281 + (A)n Simple_repeat Simple_repeat 1 30 0 4 807 246 32 0 0 chr13 29201152 29201183 -91083129 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 4 807 522 0 0 0 chr13 29201964 29202022 -91082290 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 807 946 269 193 21 chr13 29202033 29202398 -91081914 - MLT1H LTR MaLR -1 548 109 4 807 243 0 0 0 chr13 29202398 29202425 -91081887 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 807 946 269 193 21 chr13 29202425 29202484 -91081828 - MLT1H LTR MaLR -441 108 51 4 807 261 57 0 0 chr13 29202521 29202556 -91081756 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 807 426 292 23 0 chr13 29202563 29202693 -91081619 - MER2 DNA MER2_type -3 342 210 4 807 456 292 0 0 chr13 29202726 29202832 -91081480 - RSINE1 SINE B4 -10 155 50 4 807 21 0 0 0 chr13 29203244 29203265 -91081047 + AT_rich Low_complexity Low_complexity 1 21 0 4 807 315 0 0 0 chr13 29203309 29203344 -91080968 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 807 449 161 22 7 chr13 29203401 29203520 -91080792 + GA-rich Low_complexity Low_complexity 2 121 0 4 807 231 61 0 0 chr13 29203520 29203553 -91080759 + (CATA)n Simple_repeat Simple_repeat 2 34 0 4 807 449 161 22 7 chr13 29203553 29203571 -91080741 + polypurine Low_complexity Low_complexity 122 140 0 4 807 333 0 0 0 chr13 29203584 29203621 -91080691 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 807 730 295 77 35 chr13 29203637 29203897 -91080415 - B4A SINE B4 -20 272 2 4 807 235 252 50 71 chr13 29204558 29204699 -91079613 - Lx8 LINE L1 -1 7472 7335 4 807 1453 257 36 13 chr13 29204720 29205106 -91079206 - Lx8 LINE L1 -84 7389 6995 4 807 450 0 0 0 chr13 29205110 29205160 -91079152 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 807 594 269 87 38 chr13 29205182 29205448 -91078864 + L1_Mur3 LINE L1 5126 5404 -476 4 807 623 289 123 62 chr13 29205630 29205987 -91078325 - MTEb LTR MaLR 0 379 1 4 807 3168 321 60 43 chr13 29205989 29207521 -91076791 - MTEb-int LTR MaLR -2 1578 21 4 807 446 325 63 84 chr13 29207552 29207885 -91076427 - MTEb LTR MaLR 0 379 54 4 807 669 275 95 57 chr13 29207916 29208232 -91076080 - ORR1E LTR MaLR -21 338 11 4 807 22 0 0 0 chr13 29208840 29208862 -91075450 + AT_rich Low_complexity Low_complexity 1 22 0 4 807 599 250 7 0 chr13 29209437 29209577 -91074735 + ID_B1 SINE B4 84 224 0 4 807 3441 145 176 8 chr13 29211246 29211893 -91072419 - RMER6A LTR ERVK 0 756 1 4 807 213 175 0 0 chr13 29212278 29212318 -91071994 + (CATATA)n Simple_repeat Simple_repeat 4 43 0 4 807 2050 91 203 14 chr13 29212497 29212842 -91071470 - L1Md_A LINE L1 0 6582 6173 4 807 1266 56 0 1 chr13 29212841 29213001 -91071311 + L1Md_F2 LINE L1 6036 6179 -403 4 807 322 320 62 71 chr13 29213109 29213462 -91070850 + ORR1D2 LTR MaLR 6 355 -15 4 807 293 237 25 62 chr13 29213618 29213699 -91070613 + ORR1E LTR MaLR 6 83 -276 4 807 1190 219 89 25 chr13 29213706 29214020 -91070292 + MTD LTR MaLR 8 341 -78 4 807 373 238 0 0 chr13 29213999 29214083 -91070229 - MTC LTR MaLR -225 196 113 4 807 463 140 11 23 chr13 29214083 29214171 -91070141 + MTD LTR MaLR 325 411 -8 4 807 608 285 65 38 chr13 29214175 29214438 -91069874 + ORR1E LTR MaLR 79 348 -11 4 807 258 106 0 0 chr13 29214438 29214485 -91069827 + (CTCA)n Simple_repeat Simple_repeat 4 50 0 4 807 333 0 0 0 chr13 29214823 29214860 -91069452 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 807 192 294 0 14 chr13 29214978 29215047 -91069265 - L2b LINE L2 -213 3162 3095 4 807 615 284 21 16 chr13 29216824 29217010 -91067302 - B4 SINE B4 -2 290 104 4 807 325 350 72 6 chr13 29217146 29217327 -91066985 + ORR1E LTR MaLR 1 193 -166 4 807 277 308 151 71 chr13 29217815 29218158 -91066154 + MLT2B2 LTR ERVL 61 527 -40 4 807 360 0 0 0 chr13 29218172 29218212 -91066100 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 807 548 251 168 130 chr13 29219178 29219517 -91064795 + MTE2a LTR MaLR 10 361 -18 4 807 636 257 81 11 chr13 29219518 29219703 -91064609 - B4 SINE B4 -89 203 6 4 807 593 286 136 26 chr13 29219734 29219815 -91064497 - Lx8 LINE L1 -29 7444 7338 4 807 297 0 0 0 chr13 29219815 29219848 -91064464 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 4 807 593 286 136 26 chr13 29219848 29220039 -91064273 - Lx8 LINE L1 -136 7337 7143 4 807 406 290 47 0 chr13 29220053 29220160 -91064152 - PB1D7 SINE Alu -6 114 3 4 807 605 251 75 17 chr13 29220819 29220993 -91063319 - B4 SINE B4 -4 288 105 4 807 3721 169 55 9 chr13 29220997 29222035 -91062277 - L1_Mur2 LINE L1 -105 5778 4631 4 807 492 126 0 11 chr13 29222660 29222748 -91061564 - L1_Mur2 LINE L1 -1240 4637 4551 4 807 1154 114 16 11 chr13 29222744 29222930 -91061382 + Lx5 LINE L1 5765 5951 -1099 4 807 1597 125 21 13 chr13 29222932 29223167 -91061145 + Lx5 LINE L1 6219 6455 -595 4 807 8794 22 0 0 chr13 29223165 29224377 -91059935 - L1Md_A LINE L1 0 6582 5371 5 807 3154 141 133 20 chr13 29224378 29224928 -91059384 + Lx5 LINE L1 6439 7050 0 4 807 250 301 19 10 chr13 29225374 29225478 -91058834 + MIR SINE MIR 9 113 -149 5 807 640 296 129 20 chr13 29225897 29226152 -91058160 - B4 SINE B4 -6 286 4 5 807 687 194 271 0 chr13 29226954 29227124 -91057188 + B3 SINE B2 1 216 0 5 807 630 60 0 0 chr13 29227279 29227362 -91056950 + (TA)n Simple_repeat Simple_repeat 1 83 0 5 807 241 370 0 0 chr13 29227606 29227698 -91056614 + (TG)n Simple_repeat Simple_repeat 1 92 0 5 807 210 167 0 0 chr13 29227740 29227800 -91056512 + T-rich Low_complexity Low_complexity 1 60 0 5 807 531 254 24 0 chr13 29227800 29227926 -91056386 - B4 SINE B4 -69 223 95 5 807 211 370 0 0 chr13 29228226 29228307 -91056005 - MIR SINE MIR -72 190 110 5 807 378 0 0 0 chr13 29228724 29228766 -91055546 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 807 225 196 0 0 chr13 29228766 29228812 -91055500 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 100 1962 104 93 3 chr13 29229008 29229308 -91055004 + ORR1A2 LTR MaLR 1 327 0 5 808 340 189 60 42 chr13 29229902 29230068 -91054244 + (TCTA)n Simple_repeat Simple_repeat 2 170 0 5 808 255 125 0 0 chr13 29230068 29230108 -91054204 + (CCTA)n Simple_repeat Simple_repeat 4 43 0 5 808 3658 158 113 23 chr13 29230376 29231210 -91053102 + Lx5 LINE L1 1847 2755 -3125 5 808 367 70 0 50 chr13 29231210 29231270 -91053042 - MTC LTR MaLR 0 421 365 5 808 5329 137 12 7 chr13 29231270 29232102 -91052210 + Lx5 LINE L1 4883 5718 -159 5 808 2237 215 9 82 chr13 29232099 29232626 -91051686 + Lx5 LINE L1 6557 7045 -5 5 808 1754 126 87 32 chr13 29232664 29233008 -91051304 - MTB_Mm LTR MaLR -44 363 1 5 808 5963 147 111 22 chr13 29233008 29234162 -91050150 - MTB_Mm-int LTR MaLR 0 1258 2 5 808 1678 172 73 15 chr13 29234162 29234492 -91049820 - MTB_Mm LTR MaLR -1 420 72 5 808 2837 136 39 14 chr13 29234498 29234982 -91049330 - L1_Mur3 LINE L1 -246 5634 5139 5 808 451 266 133 109 chr13 29234991 29235305 -91049007 + Lx5 LINE L1 5996 6355 -695 5 808 1246 306 45 38 chr13 29235306 29235706 -91048606 + Lx5 LINE L1 6473 6875 -175 5 808 8844 181 19 67 chr13 29235693 29237022 -91047290 + Lx7 LINE L1 4904 6183 -1513 5 808 429 20 0 0 chr13 29237022 29237072 -91047240 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 808 8844 193 65 49 chr13 29237072 29238407 -91045905 + Lx7 LINE L1 6184 7558 -138 5 808 1051 133 27 22 chr13 29238407 29238592 -91045720 - B2_Mm2 SINE B2 -9 186 1 5 808 8844 193 65 49 chr13 29238592 29238724 -91045588 + Lx7 LINE L1 7559 7691 -5 5 808 733 229 7 0 chr13 29238746 29238886 -91045426 - B3 SINE B2 -75 141 1 5 808 1437 59 26 21 chr13 29238914 29238945 -91045367 - B2_Mm1t SINE B2 0 193 161 5 808 423 0 0 0 chr13 29238945 29238992 -91045320 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 5 808 1437 59 26 21 chr13 29238992 29239151 -91045161 - B2_Mm1t SINE B2 -33 160 2 5 808 379 365 16 0 chr13 29239931 29240057 -91044255 + RSINE1 SINE B4 8 135 -30 5 808 215 79 26 0 chr13 29240078 29240116 -91044196 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 5 808 304 254 14 0 chr13 29240549 29240643 -91043669 - MTEa LTR MaLR -45 334 238 5 808 293 294 92 8 chr13 29240693 29240813 -91043499 - MTEa LTR MaLR -226 133 4 5 808 261 83 0 0 chr13 29240959 29240995 -91043317 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 5 808 429 143 156 37 chr13 29241003 29241112 -91043200 - B1_Mur4 SINE Alu -20 130 9 5 808 440 183 103 28 chr13 29242827 29242934 -91041378 + B1_Mur2 SINE Alu 35 149 0 5 808 387 60 0 0 chr13 29242934 29242984 -91041328 + (GAAAA)n Simple_repeat Simple_repeat 2 51 0 5 808 339 25 0 0 chr13 29243127 29243167 -91041145 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 5 808 315 0 0 0 chr13 29243167 29243201 -91041111 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 808 298 158 42 0 chr13 29243202 29243297 -91041015 + (CAGAGA)n Simple_repeat Simple_repeat 4 102 0 5 808 833 280 89 20 chr13 29243297 29243545 -91040767 + B4 SINE B4 18 282 -10 5 808 4136 202 89 43 chr13 29244420 29244694 -91039618 - Lx7 LINE L1 -1 7695 7418 5 808 281 26 26 0 chr13 29244694 29244732 -91039580 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 808 4136 202 89 43 chr13 29244732 29245519 -91038793 - Lx7 LINE L1 -279 7417 6585 5 808 994 257 5 0 chr13 29246641 29246859 -91037453 + ID_B1 SINE B4 6 224 0 5 808 762 11 0 0 chr13 29247704 29247791 -91036521 + (GAA)n Simple_repeat Simple_repeat 2 88 0 5 808 684 115 0 0 chr13 29247794 29247898 -91036414 + (GAAA)n Simple_repeat Simple_repeat 1 104 0 5 808 728 260 61 47 chr13 29248191 29248469 -91035843 + B4A SINE B4 11 292 0 5 808 594 276 26 110 chr13 29249288 29249516 -91034796 + B4 SINE B4 1 209 -83 5 808 369 216 0 0 chr13 29249638 29249726 -91034586 + (CA)n Simple_repeat Simple_repeat 1 88 0 5 808 329 348 11 73 chr13 29250203 29250380 -91033932 - MER5A DNA MER1_type -3 186 21 5 808 331 269 121 17 chr13 29250590 29250827 -91033485 - RMER20B LTR ERVK -91 425 158 5 808 477 303 37 110 chr13 29251547 29251774 -91032538 - MLT1A0 LTR MaLR -1 364 159 5 808 450 309 156 19 chr13 29251774 29252031 -91032281 - B4A SINE B4 0 292 1 5 808 477 303 37 110 chr13 29252031 29252103 -91032209 - MLT1A0 LTR MaLR -207 158 87 5 808 2509 77 6 0 chr13 29252677 29253002 -91031310 - ORR1A2 LTR MaLR 0 327 1 5 808 440 190 30 10 chr13 29253387 29253488 -91030824 + B1F SINE Alu 47 149 0 5 808 213 276 13 38 chr13 29253500 29253579 -91030733 + ID4 SINE ID 1 77 -6 5 808 255 93 0 0 chr13 29253657 29253700 -91030612 + (A)n Simple_repeat Simple_repeat 1 43 0 5 808 243 260 0 49 chr13 29255119 29255200 -91029112 + MLT1J LTR MaLR 103 179 -333 5 808 701 277 13 35 chr13 29255657 29255889 -91028423 - L1MB1 LINE L1 -156 6012 5786 5 808 450 234 0 53 chr13 29257724 29257837 -91026475 + PB1D10 SINE Alu 1 107 -10 5 808 283 296 89 75 chr13 29257879 29258138 -91026174 + RSINE1 SINE B4 34 274 -18 5 808 207 100 0 0 chr13 29258161 29258191 -91026121 + (TAA)n Simple_repeat Simple_repeat 3 32 0 5 808 363 121 0 0 chr13 29258201 29258259 -91026053 + (AGGGGG)n Simple_repeat Simple_repeat 2 59 0 5 808 948 132 0 0 chr13 29258268 29258420 -91025892 + (GAAA)n Simple_repeat Simple_repeat 3 154 0 5 808 513 0 0 0 chr13 29258420 29258477 -91025835 + (GGGA)n Simple_repeat Simple_repeat 1 57 0 5 808 1096 258 110 12 chr13 29258821 29259221 -91025091 + MLT1C LTR MaLR 26 464 -3 5 808 207 88 0 0 chr13 29259226 29259260 -91025052 + (A)n Simple_repeat Simple_repeat 1 34 0 5 808 476 283 62 50 chr13 29259273 29259433 -91024879 + RSINE1 SINE B4 4 165 0 5 808 23 0 0 0 chr13 29259434 29259457 -91024855 + AT_rich Low_complexity Low_complexity 1 23 0 5 808 359 292 60 32 chr13 29259475 29259691 -91024621 - Lx8 LINE L1 -1477 5996 5775 5 808 471 135 21 10 chr13 29259859 29259956 -91024356 + GA-rich Low_complexity Low_complexity 2 99 0 5 808 938 246 83 32 chr13 29260415 29260692 -91023620 - B4 SINE B4 -1 291 1 5 808 841 202 23 0 chr13 29261430 29261603 -91022709 + ORR1E LTR MaLR 6 182 -177 5 808 200 223 10 41 chr13 29261635 29261733 -91022579 + (TTAA)n Simple_repeat Simple_repeat 4 98 0 5 808 771 80 0 5 chr13 29261800 29261906 -91022406 + L1Md_F3 LINE L1 5496 5615 -627 5 808 8810 20 1 5 chr13 29261906 29262908 -91021404 + L1Md_F3 LINE L1 5587 6584 0 5 808 343 300 20 10 chr13 29262908 29263009 -91021303 - B1F SINE Alu -47 102 1 5 808 240 312 35 35 chr13 29263668 29263781 -91020531 - MER44D DNA MER2_type -2 703 591 5 808 314 357 81 51 chr13 29263909 29264145 -91020167 - MER44D DNA MER2_type -459 246 4 5 808 837 263 20 5 chr13 29264316 29264515 -91019797 - ID_B1 SINE B4 -22 202 1 5 808 544 71 0 0 chr13 29265443 29265527 -91018785 - B1_Mur3 SINE Alu 0 149 66 5 808 3190 58 2 8 chr13 29266408 29266806 -91017506 - MTA_Mm LTR MaLR 0 396 1 5 808 683 342 14 27 chr13 29267175 29267467 -91016845 - B4A SINE B4 0 292 5 5 808 374 269 82 14 chr13 29267649 29267796 -91016516 - Tigger5 DNA MER2_type -94 2312 2156 5 808 324 0 0 0 chr13 29267961 29267997 -91016315 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 808 722 224 7 7 chr13 29268115 29268263 -91016049 - RSINE1 SINE B4 -16 149 2 5 808 213 94 0 0 chr13 29268355 29268387 -91015925 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 808 619 271 134 27 chr13 29268393 29268655 -91015657 - B4A SINE B4 -2 290 1 5 808 324 0 0 0 chr13 29270098 29270134 -91014178 + (CCCCAA)n Simple_repeat Simple_repeat 1 36 0 5 808 405 0 0 0 chr13 29270400 29270445 -91013867 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 808 306 0 0 0 chr13 29270455 29270489 -91013823 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 808 575 14 14 0 chr13 29270808 29270880 -91013432 + (TAGA)n Simple_repeat Simple_repeat 1 73 0 5 808 941 292 7 29 chr13 29271200 29271479 -91012833 - B4A SINE B4 -19 273 1 5 808 300 27 0 0 chr13 29271883 29271920 -91012392 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 808 644 284 10 31 chr13 29272128 29272324 -91011988 + B4 SINE B4 80 271 -21 5 808 384 59 0 0 chr13 29272326 29272377 -91011935 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 808 464 309 32 59 chr13 29272485 29272671 -91011641 + MTEa LTR MaLR 3 183 -196 5 808 278 188 31 0 chr13 29273828 29273892 -91010420 + ID4 SINE ID 2 67 -16 5 808 839 61 9 0 chr13 29273915 29274029 -91010283 + (GGAA)n Simple_repeat Simple_repeat 1 115 0 5 808 950 263 37 33 chr13 29274183 29274454 -91009858 + B4 SINE B4 3 274 -18 5 808 441 81 0 0 chr13 29274456 29274518 -91009794 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 808 357 24 0 0 chr13 29275169 29275211 -91009101 + (TC)n Simple_repeat Simple_repeat 1 42 0 5 808 387 0 0 0 chr13 29275211 29275253 -91009059 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 808 219 128 0 0 chr13 29275654 29275693 -91008619 - MER5B DNA MER1_type -1 177 139 5 808 378 0 0 0 chr13 29276715 29276757 -91007555 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 808 216 97 0 0 chr13 29277121 29277152 -91007160 + (TCCC)n Simple_repeat Simple_repeat 2 32 0 5 808 804 274 0 41 chr13 29277692 29277913 -91006399 - B4 SINE B4 0 292 81 5 808 369 0 0 0 chr13 29277926 29277967 -91006345 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 808 306 0 0 0 chr13 29277967 29278000 -91006312 + (GA)n Simple_repeat Simple_repeat 1 34 0 6 808 2820 174 41 28 chr13 29278000 29278509 -91005803 - RMER1B Other Other -35 1031 516 6 808 297 0 0 0 chr13 29279674 29279707 -91004605 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 808 212 275 174 0 chr13 29279745 29279814 -91004498 - RSINE1 SINE B4 -78 87 7 6 808 2701 135 2 5 chr13 29279980 29280398 -91003914 - MTC LTR MaLR 0 421 5 6 808 208 289 39 13 chr13 29280877 29280954 -91003358 + MIRb SINE MIR 118 196 -72 6 808 1009 262 44 11 chr13 29281688 29281958 -91002354 - B4 SINE B4 -12 280 2 6 808 597 92 0 0 chr13 29283018 29283116 -91001196 + (TC)n Simple_repeat Simple_repeat 1 98 0 6 808 386 233 0 0 chr13 29283140 29283213 -91001099 - RSINE1 SINE B4 -85 80 8 6 808 508 346 0 0 chr13 29283800 29283953 -91000359 - MER58A DNA MER1_type -70 154 2 6 808 23 0 0 0 chr13 29283971 29283994 -91000318 + AT_rich Low_complexity Low_complexity 1 23 0 6 808 409 248 107 8 chr13 29284060 29284182 -91000130 - RSINE1 SINE B4 -30 135 2 6 808 1424 230 31 17 chr13 29285606 29285960 -90998352 - MTEb LTR MaLR -18 361 3 6 808 623 161 0 8 chr13 29286260 29286379 -90997933 + CT-rich Low_complexity Low_complexity 3 120 0 6 808 230 73 24 0 chr13 29287577 29287618 -90996694 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 6 808 21 0 0 0 chr13 29287945 29287966 -90996346 + AT_rich Low_complexity Low_complexity 1 21 0 6 808 216 86 0 0 chr13 29288427 29288462 -90995850 + (A)n Simple_repeat Simple_repeat 1 35 0 6 808 444 299 122 0 chr13 29288531 29288695 -90995617 - MTEa LTR MaLR -193 186 3 6 808 216 204 0 0 chr13 29289551 29289595 -90994717 + T-rich Low_complexity Low_complexity 1 44 0 6 808 603 337 40 77 chr13 29289812 29290165 -90994147 + MER2 DNA MER2_type 4 343 -2 6 808 1082 169 71 99 chr13 29290294 29290747 -90993565 + RMER17C LTR ERVK 16 439 -519 6 808 342 229 23 0 chr13 29290947 29291054 -90993258 - PB1D10 SINE Alu -19 128 13 6 808 243 306 48 0 chr13 29291105 29291167 -90993145 - ID4_ SINE ID -2 81 17 6 808 192 77 0 0 chr13 29292082 29292108 -90992204 + (A)n Simple_repeat Simple_repeat 1 26 0 6 808 295 308 47 0 chr13 29292487 29292594 -90991718 - B1_Mur4 SINE Alu -29 121 10 6 808 488 244 43 17 chr13 29292498 29292615 -90991697 - ID_B1 SINE B4 -37 187 68 6 808 459 224 103 0 chr13 29292635 29292742 -90991570 - B3A SINE B2 -42 156 39 6 808 893 254 132 39 chr13 29292747 29293058 -90991254 + ORR1E LTR MaLR 5 344 -15 6 808 213 245 38 0 chr13 29295255 29295308 -90989004 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 808 766 335 36 22 chr13 29295314 29295589 -90988723 - B4A SINE B4 -5 287 9 6 808 425 244 0 0 chr13 29295758 29295848 -90988464 + B3 SINE B2 4 93 -123 6 808 665 248 0 0 chr13 29295852 29295993 -90988319 - RSINE1 SINE B4 -24 141 1 6 808 471 297 149 24 chr13 29296504 29296759 -90987553 + B4A SINE B4 2 288 -4 6 808 273 230 0 0 chr13 29297321 29297395 -90986917 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 808 295 353 0 0 chr13 29298518 29298620 -90985692 - PB1D7 SINE Alu -18 102 1 6 808 2061 272 147 10 chr13 29300246 29300617 -90983695 + Lx8 LINE L1 6583 6992 -481 6 808 3061 138 141 11 chr13 29300617 29301158 -90983154 - RMER19C LTR ERVK 0 611 1 6 808 2061 272 147 10 chr13 29301158 29301570 -90982742 + Lx8 LINE L1 6993 7472 -1 6 808 431 267 22 7 chr13 29301818 29301954 -90982358 - B1F SINE Alu -1 148 11 6 808 290 301 25 50 chr13 29301954 29301979 -90982333 - ID_B1 SINE B4 -2 222 66 6 808 21 57 0 0 chr13 29303139 29303174 -90981138 + AT_rich Low_complexity Low_complexity 1 35 0 6 808 307 304 0 102 chr13 29303213 29303341 -90980971 - PB1 SINE Alu -7 120 6 6 808 310 250 71 12 chr13 29303347 29303432 -90980880 - L1MB2 LINE L1 -24 6150 6059 6 808 1121 118 0 6 chr13 29303436 29303615 -90980697 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 6 808 400 195 104 0 chr13 29303670 29303747 -90980565 - B4 SINE B4 -204 88 4 6 808 326 200 10 78 chr13 29303857 29303960 -90980352 + PB1D10 SINE Alu 21 116 -1 6 808 279 79 0 0 chr13 29304025 29304063 -90980249 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 6 808 482 255 108 9 chr13 29304083 29304194 -90980118 - RSINE1 SINE B4 -36 129 8 6 808 410 53 18 0 chr13 29304724 29304781 -90979531 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 808 955 231 94 8 chr13 29304784 29304944 -90979368 - B4A SINE B4 -14 278 113 6 808 552 15 0 0 chr13 29304944 29305009 -90979303 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 808 955 231 94 8 chr13 29305009 29305093 -90979219 - B4A SINE B4 -180 112 13 6 808 3502 152 2 16 chr13 29305091 29305728 -90978584 - RMER6A LTR ERVK -25 731 104 6 808 465 66 0 0 chr13 29305739 29305800 -90978512 + (TTCCC)n Simple_repeat Simple_repeat 5 65 0 6 808 1238 85 0 6 chr13 29305804 29305982 -90978330 + (TTC)n Simple_repeat Simple_repeat 2 178 0 6 808 336 279 0 0 chr13 29306048 29306134 -90978178 + L1MA5 LINE L1 6208 6293 -7 6 808 5703 58 1 0 chr13 29306473 29307178 -90977134 + L1Md_F2 LINE L1 5876 6581 -1 6 808 273 289 13 14 chr13 29307342 29307442 -90976870 - ID4_ SINE ID -53 99 4 6 808 999 128 1 3 chr13 29307898 29308067 -90976245 + ORR1B1 LTR MaLR 93 323 -71 6 808 324 0 0 0 chr13 29308067 29308103 -90976209 + (TAA)n Simple_repeat Simple_repeat 1 36 0 6 808 288 235 15 0 chr13 29308467 29308535 -90975777 + ID4_ SINE ID 4 72 -11 6 808 481 239 148 63 chr13 29308595 29308818 -90975494 - MLT1B LTR MaLR -2 388 147 6 808 355 271 93 9 chr13 29309309 29309417 -90974895 + PB1D10 SINE Alu 1 117 0 6 808 996 148 0 0 chr13 29309549 29309718 -90974594 + (GGA)n Simple_repeat Simple_repeat 3 171 0 6 808 306 73 0 0 chr13 29309723 29309764 -90974548 + (GAA)n Simple_repeat Simple_repeat 2 42 0 6 808 240 60 0 74 chr13 29309762 29309816 -90974496 + (CAA)n Simple_repeat Simple_repeat 2 51 0 6 808 434 247 124 43 chr13 29310808 29311025 -90973287 - MLT1C LTR MaLR -171 219 1 6 808 323 288 62 31 chr13 29311743 29311872 -90972440 + RMER15 LTR ERVL 272 404 -171 6 808 315 266 0 0 chr13 29314859 29314972 -90969340 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 6 808 450 239 0 43 chr13 29314986 29315174 -90969138 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 6 808 235 279 44 0 chr13 29315634 29315702 -90968610 + PB1D7 SINE Alu 37 107 -13 6 808 603 74 0 0 chr13 29315704 29315785 -90968527 + (GA)n Simple_repeat Simple_repeat 1 81 0 6 808 1015 51 7 7 chr13 29315787 29315926 -90968386 + (GGAAA)n Simple_repeat Simple_repeat 5 143 0 6 808 645 140 0 0 chr13 29316953 29317053 -90967259 - B1_Mur4 SINE Alu -16 134 35 6 808 975 263 71 11 chr13 29317227 29317508 -90966804 - MTEa LTR MaLR 0 379 82 6 808 211 79 0 95 chr13 29317636 29317678 -90966634 - PB1D7 SINE Alu -1 119 82 6 808 351 247 0 0 chr13 29317681 29317754 -90966558 - MTEa LTR MaLR -306 73 1 6 808 246 285 18 27 chr13 29317960 29318073 -90966239 + MLT1A0 LTR MaLR 14 126 -282 6 808 2413 144 57 14 chr13 29318099 29318522 -90965790 - BGLII_B LTR ERVK 0 441 1 6 808 421 304 85 51 chr13 29319417 29319712 -90964600 + MARNA DNA Mariner 244 548 -38 6 808 521 296 77 34 chr13 29319719 29319944 -90964368 + B4A SINE B4 3 237 -55 6 808 1164 57 0 0 chr13 29319944 29320085 -90964227 + B1_Mm SINE Alu 1 141 -6 6 808 926 167 0 6 chr13 29320103 29320284 -90964028 + GA-rich Low_complexity Low_complexity 1 180 0 6 808 209 167 36 36 chr13 29320377 29320433 -90963879 + (CATATA)n Simple_repeat Simple_repeat 1 56 0 6 808 26 30 0 0 chr13 29320925 29320958 -90963354 + AT_rich Low_complexity Low_complexity 1 33 0 6 808 29 28 0 0 chr13 29320981 29321017 -90963295 + AT_rich Low_complexity Low_complexity 1 36 0 6 808 214 270 11 0 chr13 29321355 29321412 -90962900 + B1F SINE Alu 7 66 -83 6 808 622 280 7 0 chr13 29321412 29321562 -90962750 + B3A SINE B2 2 152 -46 6 808 378 0 0 0 chr13 29321616 29321658 -90962654 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 808 342 0 0 0 chr13 29321658 29321695 -90962617 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 808 892 302 44 111 chr13 29321752 29321823 -90962489 - L1MEf LINE L1 -910 5236 5168 6 808 324 0 0 0 chr13 29321823 29321859 -90962453 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 6 808 1106 73 0 0 chr13 29321859 29321995 -90962317 - B1_Mus1 SINE Alu -11 137 2 6 808 892 302 44 111 chr13 29321995 29322611 -90961701 - L1MEf LINE L1 -979 5167 4611 6 808 360 0 0 0 chr13 29322611 29322651 -90961661 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 808 892 302 44 111 chr13 29322651 29322752 -90961560 - L1MEf LINE L1 -1536 4610 4500 6 808 2384 225 51 30 chr13 29322762 29323431 -90960881 + L1_Mur3 LINE L1 1896 2578 -3302 6 808 441 242 14 0 chr13 29323435 29323540 -90960772 - Lx8 LINE L1 -1017 6679 6583 6 808 241 268 18 0 chr13 29323769 29323825 -90960487 - L1M2 LINE L1 -625 5666 5610 6 808 492 280 63 54 chr13 29323813 29324157 -90960155 - L1MEf LINE L1 -3761 2385 2032 6 808 333 245 91 10 chr13 29324218 29324317 -90959995 - ID_B1 SINE B4 -3 221 115 6 808 196 185 37 0 chr13 29325456 29325510 -90958802 + GA-rich Low_complexity Low_complexity 5 60 0 6 808 180 0 0 0 chr13 29325768 29325788 -90958524 + (A)n Simple_repeat Simple_repeat 1 20 0 6 808 410 78 32 43 chr13 29326679 29326773 -90957539 + (TCTCTG)n Simple_repeat Simple_repeat 2 94 0 6 808 372 77 0 0 chr13 29327555 29327607 -90956705 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 808 767 230 45 0 chr13 29328237 29328415 -90955897 + B4 SINE B4 2 187 -105 6 808 325 119 44 15 chr13 29328579 29328647 -90955665 + GA-rich Low_complexity Low_complexity 4 73 0 7 808 4115 98 15 9 chr13 29328754 29329468 -90954844 + L1Md_Gf LINE L1 486 1239 -5380 7 808 15906 20 2 0 chr13 29331998 29333815 -90950497 + L1Md_A LINE L1 3767 5586 -297 7 808 8704 28 0 1 chr13 29333815 29334812 -90949500 + L1Md_A LINE L1 5587 6582 0 7 808 292 264 82 74 chr13 29334814 29334949 -90949363 - RMER10A LTR ERVL -295 147 12 7 808 276 30 0 0 chr13 29335042 29335075 -90949237 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 808 940 151 0 11 chr13 29335880 29336061 -90948251 + GA-rich Low_complexity Low_complexity 2 180 0 7 808 2520 46 0 0 chr13 29337460 29337763 -90946549 - L1Md_A LINE L1 0 6582 6280 7 808 270 270 0 0 chr13 29338345 29338408 -90945904 + MLT1B LTR MaLR 326 388 -2 7 808 21 36 0 0 chr13 29338704 29338732 -90945580 + AT_rich Low_complexity Low_complexity 1 28 0 7 808 449 279 0 76 chr13 29339824 29339995 -90944317 + MLT1C LTR MaLR 3 160 -307 7 808 715 254 13 8 chr13 29340660 29340854 -90943458 + B3A SINE B2 7 193 -23 7 808 38756 31 0 1 chr13 29340925 29347696 -90936616 - L1Md_T LINE L1 0 6585 1 7 808 250 337 12 0 chr13 29348504 29348587 -90935725 + PB1D7 SINE Alu 29 112 -8 7 808 339 113 0 0 chr13 29348587 29348640 -90935672 + (CATA)n Simple_repeat Simple_repeat 2 54 0 7 808 465 288 21 107 chr13 29348655 29348795 -90935517 + RSINE1 SINE B4 2 129 -36 7 808 216 0 0 0 chr13 29348893 29348917 -90935395 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 808 1724 139 211 3 chr13 29349385 29349689 -90934623 - ORR1B2 LTR MaLR 0 367 1 7 808 25 0 0 0 chr13 29350007 29350032 -90934280 + AT_rich Low_complexity Low_complexity 1 25 0 7 808 553 263 92 7 chr13 29350044 29350109 -90934203 + ID SINE ID 5 82 -142 7 808 333 294 58 19 chr13 29350109 29350213 -90934099 + PB1D10 SINE Alu 1 108 -9 7 808 543 291 75 28 chr13 29350278 29350532 -90933780 + L1MB5 LINE L1 5804 6069 -105 7 808 1680 127 58 24 chr13 29350746 29351037 -90933275 - Lx3_Mus LINE L1 0 7009 6709 7 808 5321 96 43 13 chr13 29351040 29351814 -90932498 - Lx3_Mus LINE L1 -410 6599 5803 7 808 5526 51 41 3 chr13 29351809 29352539 -90931773 + L1_Mur1 LINE L1 3658 4415 -1471 7 808 786 102 0 0 chr13 29352584 29352702 -90931610 + (TTC)n Simple_repeat Simple_repeat 3 120 0 7 808 669 189 70 19 chr13 29352703 29352840 -90931472 - Lx7 LINE L1 -2 7694 7560 7 808 1169 68 7 0 chr13 29352840 29352986 -90931326 + B1_Mm SINE Alu 1 147 0 7 808 669 189 70 19 chr13 29352986 29353063 -90931249 - Lx7 LINE L1 -137 7559 7469 7 808 457 187 69 65 chr13 29353054 29353271 -90931041 - Lx7 LINE L1 -122 7574 7357 7 808 578 161 9 0 chr13 29353271 29353383 -90930929 + GA-rich Low_complexity Low_complexity 1 113 0 7 808 1454 155 14 6 chr13 29353389 29353631 -90930681 - Lx7 LINE L1 -505 6968 6720 7 808 2978 222 47 132 chr13 29353899 29355004 -90929308 + RMER1B Other Other 45 1055 -11 7 808 240 156 0 0 chr13 29355012 29355050 -90929262 + (TGGG)n Simple_repeat Simple_repeat 3 40 0 7 808 1194 107 0 1 chr13 29355050 29355238 -90929074 + (TAGA)n Simple_repeat Simple_repeat 1 187 0 7 808 240 95 0 0 chr13 29355227 29355263 -90929049 + (TGGG)n Simple_repeat Simple_repeat 1 36 0 7 808 436 80 13 26 chr13 29355263 29355334 -90928978 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 7 808 971 118 11 22 chr13 29355351 29355533 -90928779 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 7 808 229 254 0 15 chr13 29355612 29355680 -90928632 + L1MA5 LINE L1 6223 6289 -11 7 808 459 0 0 0 chr13 29355680 29355731 -90928581 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 808 246 160 0 0 chr13 29356777 29356827 -90927485 + T-rich Low_complexity Low_complexity 1 50 0 7 808 596 73 0 0 chr13 29356831 29356913 -90927399 - B1_Mm SINE Alu 0 147 66 7 808 322 242 9 66 chr13 29356913 29356934 -90927378 - ID_B1 SINE B4 -1 220 124 7 808 3256 34 2 207 chr13 29357040 29357638 -90926674 - IAPLTR2_Mm LTR ERVK 0 475 1 7 808 1473 199 114 16 chr13 29357698 29358166 -90926146 + RMER19B LTR ERVK 138 664 -238 7 808 380 294 135 37 chr13 29358154 29358460 -90925852 - MLT1F2 LTR MaLR -209 351 2 7 808 411 253 11 0 chr13 29358681 29358776 -90925536 + ORR1E LTR MaLR 1 96 -263 7 808 328 304 121 89 chr13 29358858 29359115 -90925197 + ORR1E LTR MaLR 92 356 -3 7 808 587 285 20 46 chr13 29359182 29359377 -90924935 + MTE2a LTR MaLR 147 336 -43 7 12 7175 27 15 0 chr13 29359438 29360284 -90924028 + L1Md_F3 LINE L1 5712 6570 -14 7 809 1313 81 12 0 chr13 29360294 29360467 -90923845 + B2_Mm1a SINE B2 1 175 -18 7 809 489 258 65 0 chr13 29360941 29361065 -90923247 + RSINE1 SINE B4 5 136 -29 7 809 502 245 11 2 chr13 29361107 29361246 -90923066 + B1F SINE Alu 1 142 -7 7 809 618 272 83 72 chr13 29361251 29361528 -90922784 + B4 SINE B4 2 281 -11 7 809 218 240 26 13 chr13 29361551 29361627 -90922685 + (CATA)n Simple_repeat Simple_repeat 2 78 0 7 809 273 57 0 0 chr13 29361671 29361706 -90922606 + (TA)n Simple_repeat Simple_repeat 1 35 0 7 809 384 22 0 0 chr13 29361706 29361750 -90922562 + (GA)n Simple_repeat Simple_repeat 2 46 0 7 809 348 24 0 0 chr13 29361751 29361792 -90922520 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 809 326 244 0 25 chr13 29361900 29361980 -90922332 + B3A SINE B2 2 79 -119 7 809 1319 71 49 6 chr13 29362614 29362797 -90921515 + B2_Mm2 SINE B2 1 191 -4 7 809 526 278 186 16 chr13 29362991 29363243 -90921069 - MER2 DNA MER2_type -44 301 7 7 809 237 278 166 96 chr13 29363918 29364117 -90920195 + MTEa LTR MaLR 2 214 -165 7 809 596 212 146 6 chr13 29364145 29364316 -90919996 + MTD LTR MaLR 11 205 -214 7 809 595 144 114 41 chr13 29364322 29364445 -90919867 + B1_Mus1 SINE Alu 10 141 -7 7 809 649 88 20 0 chr13 29364448 29364550 -90919762 + (GA)n Simple_repeat Simple_repeat 2 105 0 7 809 867 240 30 5 chr13 29364550 29364751 -90919561 + MTD LTR MaLR 200 405 -14 7 809 614 258 8 0 chr13 29365063 29365195 -90919117 + B4 SINE B4 95 227 -65 7 809 549 110 0 0 chr13 29365228 29365310 -90919002 + (CA)n Simple_repeat Simple_repeat 1 82 0 7 809 258 286 39 0 chr13 29365470 29365547 -90918765 - L1MB3 LINE L1 -41 6142 6063 7 809 194 0 39 0 chr13 29366192 29366218 -90918094 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 7 809 311 44 22 0 chr13 29366676 29366721 -90917591 + (TC)n Simple_repeat Simple_repeat 2 47 0 7 809 231 346 0 71 chr13 29366825 29366909 -90917403 - ID SINE ID -146 78 1 7 809 306 266 12 12 chr13 29367033 29367113 -90917199 + ID4_ SINE ID 3 82 -1 7 809 691 241 14 7 chr13 29367124 29367266 -90917046 + RSINE1 SINE B4 8 150 -15 7 809 396 88 0 0 chr13 29367272 29367329 -90916983 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 7 809 875 155 21 7 chr13 29367431 29367574 -90916738 + B1_Mus2 SINE Alu 1 145 -2 7 809 219 69 0 0 chr13 29367575 29367604 -90916708 + (TAA)n Simple_repeat Simple_repeat 3 31 0 7 809 263 26 0 49 chr13 29367975 29368016 -90916296 + (CAAAAA)n Simple_repeat Simple_repeat 5 43 0 7 809 363 255 50 10 chr13 29368028 29368127 -90916185 + PB1D7 SINE Alu 7 109 -11 7 809 423 309 29 7 chr13 29368127 29368267 -90916045 + B3A SINE B2 1 143 -55 7 809 916 255 28 12 chr13 29368560 29368810 -90915502 - L1MA4 LINE L1 -385 5915 5662 7 809 3109 132 25 27 chr13 29369023 29369545 -90914767 - RLTR11A2 LTR ERVK -3 524 4 7 809 412 301 125 17 chr13 29370947 29371123 -90913189 + B4A SINE B4 3 197 -95 7 809 306 0 0 0 chr13 29371129 29371163 -90913149 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 809 536 206 235 0 chr13 29371178 29371314 -90912998 + B3A SINE B2 9 176 -22 7 809 533 276 48 12 chr13 29371527 29371692 -90912620 + MER58A DNA MER1_type 52 222 -2 7 809 486 287 99 6 chr13 29372657 29372829 -90911483 + ID_B1 SINE B4 3 190 -34 7 809 1169 69 0 0 chr13 29372905 29373050 -90911262 + B1_Mm SINE Alu 1 145 -2 7 809 186 71 0 0 chr13 29373051 29373079 -90911233 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 7 809 357 281 53 0 chr13 29373087 29373187 -90911125 + PB1D9 SINE Alu 1 106 -14 7 809 249 57 0 0 chr13 29373187 29373222 -90911090 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 7 809 357 281 53 0 chr13 29373222 29373235 -90911077 + PB1D9 SINE Alu 107 119 -1 7 809 584 200 13 40 chr13 29374188 29374339 -90909973 + ORR1E LTR MaLR 1 147 -212 7 809 449 190 8 72 chr13 29374348 29374473 -90909839 - RMER30 DNA MER1_type -80 122 6 7 809 2145 92 13 0 chr13 29374548 29374863 -90909449 - ORR1A2 LTR MaLR -8 319 1 7 809 617 153 0 227 chr13 29375077 29375271 -90909041 - B1_Mur4 SINE Alu 0 150 1 7 809 233 214 0 0 chr13 29375282 29375324 -90908988 - Lx8 LINE L1 -1779 5694 5653 7 809 224 283 0 0 chr13 29376077 29376130 -90908182 + B1F2 SINE Alu 1 53 -96 7 809 235 49 24 24 chr13 29376474 29376516 -90907796 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 809 269 244 24 31 chr13 29376549 29376676 -90907636 + (CA)n Simple_repeat Simple_repeat 2 127 0 7 809 394 254 127 75 chr13 29377880 29378093 -90906219 - Tigger7 DNA MER2_type -21 2470 2248 7 809 404 264 37 0 chr13 29378142 29378250 -90906062 - PB1D7 SINE Alu -7 113 2 7 809 1055 314 83 21 chr13 29378271 29378706 -90905606 - Tigger7 DNA MER2_type -2027 464 3 7 809 1129 62 14 0 chr13 29378825 29378970 -90905342 + B1_Mm SINE Alu 1 147 0 7 809 822 228 36 31 chr13 29379202 29379424 -90904888 + ID_B1 SINE B4 2 224 0 7 809 831 249 37 98 chr13 29380032 29380357 -90903955 - ORR1E LTR MaLR -54 305 1 7 809 568 272 0 20 chr13 29380657 29380807 -90903505 - B1_Mur1 SINE Alu -1 148 2 7 809 301 292 65 9 chr13 29381080 29381187 -90903125 + PB1D10 SINE Alu 5 117 0 7 809 1147 70 0 0 chr13 29381197 29381340 -90902972 + B1_Mus1 SINE Alu 5 147 -1 7 809 195 146 0 0 chr13 29381342 29381383 -90902929 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 8 809 281 227 110 33 chr13 29381947 29382038 -90902274 + ID_B1 SINE B4 117 214 -10 8 809 206 304 0 61 chr13 29382066 29382164 -90902148 + MER5B DNA MER1_type 29 120 -58 8 809 311 339 62 16 chr13 29382701 29382830 -90901482 - ID_B1 SINE B4 0 224 90 8 809 575 229 8 24 chr13 29382996 29383121 -90901191 + B1_Mur1 SINE Alu 6 128 -21 8 809 370 270 116 65 chr13 29383132 29383409 -90900903 + B4 SINE B4 2 292 0 8 809 381 287 75 70 chr13 29384424 29384611 -90899701 - L1M3 LINE L1 -512 5788 5601 8 809 251 200 55 0 chr13 29384634 29384689 -90899623 + ID4_ SINE ID 14 71 -12 8 809 248 232 0 0 chr13 29384691 29384747 -90899565 - L1M3 LINE L1 -729 5562 5507 8 809 472 273 25 0 chr13 29384809 29384930 -90899382 - RSINE1 SINE B4 -31 134 11 8 809 254 188 15 30 chr13 29385010 29385060 -90899252 - PB1D10 SINE Alu -1 116 67 8 809 2036 141 20 3 chr13 29385060 29385366 -90898946 - RLTR10E LTR ERVK 0 311 1 8 809 254 188 15 30 chr13 29385366 29385381 -90898931 - PB1D10 SINE Alu -51 66 52 8 809 816 243 62 8 chr13 29385426 29385777 -90898535 - L1M3 LINE L1 -858 5442 5071 8 809 289 248 25 174 chr13 29385801 29385923 -90898389 - L1M3 LINE L1 -1832 4311 4212 8 809 532 147 63 0 chr13 29385923 29386018 -90898294 + PB1D9 SINE Alu 3 103 -17 8 809 289 248 25 174 chr13 29386018 29386056 -90898256 - L1M3 LINE L1 -1932 4211 4175 8 809 1245 96 0 0 chr13 29386062 29386240 -90898072 + (TTC)n Simple_repeat Simple_repeat 3 180 0 8 809 1138 114 0 11 chr13 29386240 29386602 -90897710 + (TCC)n Simple_repeat Simple_repeat 1 358 0 8 809 953 296 136 19 chr13 29386608 29387160 -90897152 - L1M3 LINE L1 -1955 4191 3566 8 809 848 229 119 12 chr13 29387455 29387707 -90896605 - L1M3 LINE L1 -3243 2900 2622 8 809 906 204 31 50 chr13 29387735 29387993 -90896319 - BGLII_B LTR ERVK -64 377 125 8 809 346 201 187 74 chr13 29388040 29388214 -90896098 - B4A SINE B4 -50 242 50 8 809 307 182 153 26 chr13 29388402 29388564 -90895748 - B2_Mm2 SINE B2 0 195 1 8 809 1200 119 11 0 chr13 29388579 29388755 -90895557 - B2_Mm1a SINE B2 -14 179 2 8 809 3610 166 89 77 chr13 29389212 29390098 -90894214 - RMER19B LTR ERVK 0 902 6 8 809 21 36 0 0 chr13 29390209 29390237 -90894075 + AT_rich Low_complexity Low_complexity 1 28 0 8 809 1501 204 73 22 chr13 29390465 29390598 -90893714 - ORR1D1 LTR MaLR 0 374 231 8 809 213 39 0 0 chr13 29390598 29390624 -90893688 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 8 809 1501 204 73 22 chr13 29390624 29390846 -90893466 - ORR1D1 LTR MaLR -144 230 1 8 809 453 336 8 0 chr13 29390846 29390968 -90893344 + RSINE1 SINE B4 39 161 -4 8 809 377 39 0 19 chr13 29390971 29391023 -90893289 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 8 809 639 324 26 42 chr13 29391443 29391749 -90892563 + Tigger7 DNA MER2_type 16 316 -2175 8 809 5530 103 20 40 chr13 29391853 29392758 -90891554 - RMER17D LTR ERVK -2 887 1 8 809 459 112 230 0 chr13 29392969 29393117 -90891195 - Lx9 LINE L1 -1 7643 7433 8 809 216 0 0 0 chr13 29393117 29393141 -90891171 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 809 886 238 41 27 chr13 29393171 29393391 -90890921 - Lx8 LINE L1 -451 7022 6800 8 809 202 200 40 0 chr13 29393666 29393716 -90890596 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 8 809 822 166 58 0 chr13 29393718 29393857 -90890455 - B1_Mus2 SINE Alu 0 147 1 8 809 414 0 0 0 chr13 29393861 29393907 -90890405 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 809 348 127 0 0 chr13 29393914 29393969 -90890343 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 809 200 32 32 0 chr13 29393969 29393994 -90890318 + (TA)n Simple_repeat Simple_repeat 1 26 0 8 809 663 281 143 46 chr13 29394000 29394392 -90889920 + L1MC3 LINE L1 5444 5873 -471 8 809 427 206 9 87 chr13 29394394 29394582 -90889730 + B3A SINE B2 12 205 -11 8 809 362 325 37 12 chr13 29394585 29394747 -90889565 + L1MC3 LINE L1 5862 6027 -1968 8 809 433 258 127 36 chr13 29394956 29395121 -90889191 - MTEa LTR MaLR -152 227 48 8 809 374 258 23 46 chr13 29395098 29395228 -90889084 - MTEb LTR MaLR -250 129 3 8 809 761 292 50 20 chr13 29395230 29395527 -90888785 + L1MC3 LINE L1 6635 6940 -845 8 809 257 208 0 14 chr13 29396291 29396364 -90887948 + GA-rich Low_complexity Low_complexity 2 73 0 8 809 1140 131 52 74 chr13 29396466 29396697 -90887615 - URR1A DNA MER1_type 0 226 1 8 809 214 241 172 0 chr13 29397087 29397145 -90887167 + RSINE1 SINE B4 3 70 -95 8 809 21 36 0 0 chr13 29397242 29397270 -90887042 + AT_rich Low_complexity Low_complexity 1 28 0 8 809 391 286 87 15 chr13 29397482 29397677 -90886635 + L1MB4 LINE L1 5570 5778 -396 8 809 364 308 34 27 chr13 29397700 29397847 -90886465 + L1MB4 LINE L1 5849 5996 -184 8 809 409 225 85 8 chr13 29398583 29398598 -90885714 + B1F1 SINE Alu 2 141 -8 8 809 489 235 17 0 chr13 29398598 29398713 -90885599 + ID_B1 SINE B4 100 216 -8 8 809 830 85 16 38 chr13 29398763 29398947 -90885365 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 809 607 225 129 28 chr13 29398989 29399167 -90885145 - B4A SINE B4 -95 197 2 8 809 521 257 34 39 chr13 29400370 29400548 -90883764 - B4A SINE B4 -114 178 2 8 809 323 256 53 43 chr13 29400665 29400759 -90883553 + B1F1 SINE Alu 48 142 -7 8 809 266 261 31 0 chr13 29401147 29401212 -90883100 + B1F1 SINE Alu 4 70 -79 8 809 459 246 214 18 chr13 29401286 29401547 -90882765 - L1MA4 LINE L1 -212 6085 5772 8 809 189 0 0 0 chr13 29401629 29401650 -90882662 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 809 471 48 0 0 chr13 29401650 29401711 -90882601 + (GA)n Simple_repeat Simple_repeat 2 63 0 8 809 921 230 104 29 chr13 29401715 29402024 -90882288 - L1MA4 LINE L1 -520 5780 5449 8 809 1801 221 135 20 chr13 29402280 29402834 -90881478 - Lx9 LINE L1 -81 7563 6946 8 809 1987 138 23 6 chr13 29402839 29403188 -90881124 + ORR1B2 LTR MaLR 5 359 -8 8 809 788 224 48 0 chr13 29403193 29403358 -90880954 - Lx9 LINE L1 -688 6956 6784 8 809 817 272 122 93 chr13 29403348 29403535 -90880777 - Lx9 LINE L1 -1045 6599 6417 8 809 261 0 0 0 chr13 29403535 29403564 -90880748 + (CTG)n Simple_repeat Simple_repeat 1 29 0 8 809 817 260 100 62 chr13 29403564 29404049 -90880263 - Lx9 LINE L1 -1228 6416 5792 8 809 2240 194 109 42 chr13 29404045 29404687 -90879625 - Lx9 LINE L1 -301 5546 4862 8 809 460 118 11 23 chr13 29406149 29406236 -90878076 + GA-rich Low_complexity Low_complexity 4 89 0 8 809 1669 184 104 10 chr13 29406472 29406857 -90877455 + MTC LTR MaLR 1 421 0 8 809 369 271 155 161 chr13 29406892 29407183 -90877129 + B4 SINE B4 4 292 0 8 809 269 145 16 0 chr13 29407213 29407275 -90877037 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 809 180 0 0 0 chr13 29407389 29407409 -90876903 + (TTA)n Simple_repeat Simple_repeat 2 21 0 8 809 3185 106 30 24 chr13 29407409 29407903 -90876409 - Lx LINE L1 -15 6639 6143 8 809 1314 124 5 0 chr13 29407903 29408104 -90876208 + Lx LINE L1 5823 6024 -630 8 809 3152 35 8 0 chr13 29408794 29409166 -90875146 - L1Md_F3 LINE L1 -15 6569 6195 8 809 230 81 27 0 chr13 29409199 29409236 -90875076 + (TTG)n Simple_repeat Simple_repeat 2 39 0 8 809 382 316 97 8 chr13 29409297 29409431 -90874881 - RSINE1 SINE B4 -16 149 4 8 809 637 284 61 5 chr13 29409438 29409636 -90874676 - ID_B1 SINE B4 -15 209 1 8 809 415 244 147 81 chr13 29409705 29409861 -90874451 - L1MB4 LINE L1 -125 6055 5874 8 809 288 286 0 0 chr13 29409861 29409931 -90874381 + ID4_ SINE ID 1 70 -13 8 809 415 278 181 38 chr13 29409931 29410326 -90873986 - L1MB4 LINE L1 -307 5873 5404 8 809 722 43 11 0 chr13 29410433 29410527 -90873785 + (TTTC)n Simple_repeat Simple_repeat 4 98 0 8 809 1708 146 14 3 chr13 29410527 29410816 -90873496 - Lx LINE L1 -16 6638 6347 8 809 356 342 0 0 chr13 29410839 29410956 -90873356 - L1MB4 LINE L1 -1284 4856 4740 8 809 634 180 114 30 chr13 29410976 29411108 -90873204 - B1_Mur3 SINE Alu -5 144 2 8 809 331 300 143 46 chr13 29411144 29411743 -90872569 - L1MB4 LINE L1 -1594 4552 3869 8 809 263 272 11 32 chr13 29411743 29411838 -90872474 - L1MB4 LINE L1 -2400 3746 3654 8 809 443 325 64 54 chr13 29413123 29413403 -90870909 + RMER5 LTR ERV1 252 534 0 8 809 371 279 145 16 chr13 29413454 29413578 -90870734 - B1_Mus2 SINE Alu -3 144 5 8 809 465 19 0 0 chr13 29413597 29413651 -90870661 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 809 414 0 0 0 chr13 29413651 29413696 -90870616 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 809 24 32 0 0 chr13 29413724 29413755 -90870557 + AT_rich Low_complexity Low_complexity 1 31 0 8 809 433 231 11 11 chr13 29413940 29414032 -90870280 + PB1D9 SINE Alu 2 93 -27 8 809 206 32 0 31 chr13 29414041 29414073 -90870239 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 8 809 34 0 0 0 chr13 29414110 29414144 -90870168 + AT_rich Low_complexity Low_complexity 1 34 0 8 809 338 381 64 26 chr13 29414410 29414677 -90869635 - MER119 DNA MER1_type -215 368 92 8 809 505 264 31 8 chr13 29414649 29414779 -90869533 - RSINE1 SINE B4 -31 134 2 8 809 320 259 179 1 chr13 29416037 29416180 -90868132 + L1ME3A LINE L1 5761 5929 -235 8 809 315 105 0 0 chr13 29417587 29417644 -90866668 + (A)n Simple_repeat Simple_repeat 1 57 0 8 809 24 32 0 0 chr13 29418931 29418962 -90865350 + AT_rich Low_complexity Low_complexity 1 31 0 8 809 383 259 51 8 chr13 29419439 29419556 -90864756 + RSINE1 SINE B4 44 165 0 8 809 1360 284 124 63 chr13 29419557 29420964 -90863348 + L1M2 LINE L1 4156 5650 -650 8 809 588 296 55 9 chr13 29421079 29421327 -90862985 - B4A SINE B4 -6 286 9 8 809 316 198 42 104 chr13 29421830 29421926 -90862386 - PB1D10 SINE Alu -8 109 20 8 809 189 0 0 0 chr13 29422018 29422039 -90862273 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 809 321 135 0 0 chr13 29422072 29422124 -90862188 + (TG)n Simple_repeat Simple_repeat 2 53 0 8 809 423 240 52 37 chr13 29422924 29423058 -90861254 + MTEb LTR MaLR 244 379 0 8 809 312 295 141 42 chr13 29423066 29423257 -90861055 - MLT1D LTR MaLR -3 502 293 8 809 351 284 46 0 chr13 29423315 29423424 -90860888 - MLT1D LTR MaLR -359 146 33 8 809 1724 235 44 31 chr13 29426221 29426699 -90857613 - Lx5 LINE L1 -668 6382 5899 8 809 708 271 72 72 chr13 29426689 29426952 -90857360 + Lx6 LINE L1 6563 6825 -635 8 809 1379 229 116 12 chr13 29426950 29427286 -90857026 + Lx6 LINE L1 7086 7456 -4 8 809 280 330 130 27 chr13 29428461 29428606 -90855706 - MLT1D LTR MaLR -302 203 39 8 809 2211 132 113 5 chr13 29428606 29428986 -90855326 - MTC LTR MaLR 0 421 1 8 809 280 330 130 27 chr13 29428986 29429024 -90855288 - MLT1D LTR MaLR -467 38 1 8 809 1291 188 5 0 chr13 29429141 29429365 -90854947 + URR1B DNA MER1_type 1 225 0 8 809 281 336 69 102 chr13 29429769 29430074 -90854238 + MLT1H LTR MaLR 128 422 -127 8 809 185 316 116 0 chr13 29430226 29430321 -90853991 - L2b LINE L2 -33 3393 3288 8 809 219 295 87 102 chr13 29430400 29430596 -90853716 - L2b LINE L2 -278 3148 2956 8 809 233 367 86 0 chr13 29431579 29431718 -90852594 - MIRb SINE MIR -22 246 96 8 809 35927 84 18 17 chr13 29433797 29439938 -90844374 - L1Md_F3 LINE L1 -219 6365 238 9 809 1300 136 45 0 chr13 29439938 29440181 -90844131 + RLTR44B LTR ERVK 194 447 -2 9 809 397 325 51 82 chr13 29440563 29440818 -90843494 + MTEb LTR MaLR 15 261 -118 9 809 294 95 0 0 chr13 29441198 29441240 -90843072 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 809 209 163 0 23 chr13 29441381 29441425 -90842887 + MIRb SINE MIR 225 267 -1 9 809 216 158 0 0 chr13 29441888 29441926 -90842386 + A-rich Low_complexity Low_complexity 1 38 0 9 809 346 254 161 31 chr13 29442375 29442505 -90841807 - RSINE1 SINE B4 -16 149 3 9 809 218 370 11 0 chr13 29442795 29442887 -90841425 - MIR SINE MIR -169 93 1 9 809 240 299 31 0 chr13 29443552 29443649 -90840663 - ID_B1 SINE B4 -52 172 73 9 809 187 234 207 52 chr13 29443976 29444111 -90840201 - MIRb SINE MIR -75 193 38 9 809 204 97 0 0 chr13 29445009 29445040 -90839272 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 9 809 412 291 102 0 chr13 29445093 29445220 -90839092 + ID_B1 SINE B4 81 220 -4 9 809 503 219 23 68 chr13 29445251 29445383 -90838929 + RSINE1 SINE B4 12 137 -28 9 809 272 119 17 0 chr13 29445411 29445470 -90838842 + (CA)n Simple_repeat Simple_repeat 2 61 0 9 809 331 279 101 18 chr13 29446703 29446871 -90837441 - L1MC3 LINE L1 -16 7769 7588 9 809 270 0 0 0 chr13 29447179 29447209 -90837103 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 809 441 240 116 54 chr13 29450234 29450619 -90833693 + Lx8 LINE L1 5777 6193 -1280 9 809 1993 184 20 15 chr13 29450643 29451050 -90833262 + MTD LTR MaLR 1 409 -10 9 809 709 214 98 55 chr13 29451057 29451240 -90833072 + Lx8 LINE L1 6237 6427 -1046 9 809 1144 251 175 19 chr13 29451262 29451639 -90832673 + Lx8 LINE L1 6819 7254 -219 9 809 707 205 6 45 chr13 29451640 29451819 -90832493 + B2_Mm2 SINE B2 2 173 -22 9 809 299 286 13 0 chr13 29453473 29453550 -90830762 - ID4_ SINE ID -3 80 3 9 809 398 256 74 33 chr13 29454439 29454560 -90829752 + B3A SINE B2 53 178 -38 9 809 393 22 0 0 chr13 29454565 29454611 -90829701 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 809 558 43 0 0 chr13 29454650 29454719 -90829593 + (TTA)n Simple_repeat Simple_repeat 1 69 0 9 809 189 107 0 0 chr13 29456323 29456351 -90827961 + (T)n Simple_repeat Simple_repeat 1 28 0 9 809 513 248 28 21 chr13 29456411 29456555 -90827757 + B1F1 SINE Alu 5 149 0 9 809 336 167 0 0 chr13 29458073 29458145 -90826167 + (TG)n Simple_repeat Simple_repeat 2 73 0 9 809 436 301 28 39 chr13 29458445 29458625 -90825687 - B3A SINE B2 -16 182 5 9 809 21 36 0 0 chr13 29458917 29458945 -90825367 + AT_rich Low_complexity Low_complexity 1 28 0 9 809 326 243 0 14 chr13 29458991 29459062 -90825250 - RSINE1 SINE B4 -53 112 43 9 809 317 333 187 0 chr13 29459107 29459305 -90825007 + Tigger7 DNA MER2_type 1 235 -2256 9 809 445 193 58 22 chr13 29459310 29459448 -90824864 + Tigger7 DNA MER2_type 2236 2378 -113 9 809 1144 296 71 13 chr13 29459455 29459921 -90824391 - RMER5 LTR ERV1 -9 525 33 9 809 236 278 45 27 chr13 29459958 29460069 -90824243 + Tigger7 DNA MER2_type 2368 2480 -11 9 809 231 36 0 0 chr13 29460456 29460484 -90823828 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 9 809 850 246 32 9 chr13 29461270 29461487 -90822825 + ID_B1 SINE B4 1 222 -2 9 809 1126 35 20 40 chr13 29461554 29461704 -90822608 - B1_Mm SINE Alu 0 147 1 9 809 1265 195 40 4 chr13 29461830 29462082 -90822230 + Lx9 LINE L1 6959 7219 -425 9 809 585 172 0 0 chr13 29462100 29462193 -90822119 + Lx9 LINE L1 7384 7476 -168 9 809 324 0 0 0 chr13 29462193 29462229 -90822083 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 809 259 45 22 43 chr13 29465547 29465593 -90818719 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 9 809 367 250 125 0 chr13 29466230 29466334 -90817978 - ID_B1 SINE B4 -9 215 99 9 809 661 221 222 13 chr13 29466499 29466724 -90817588 + B4A SINE B4 3 274 -18 9 809 617 294 14 106 chr13 29466782 29466999 -90817313 + ID_B1 SINE B4 10 206 -18 9 809 282 272 32 21 chr13 29468059 29468153 -90816159 - RSINE1 SINE B4 -68 97 3 9 809 731 122 16 0 chr13 29468282 29468405 -90815907 - L1_Mus2 LINE L1 0 6566 6442 9 809 240 258 120 33 chr13 29469069 29469161 -90815151 - MLT1A1 LTR MaLR -12 396 297 9 809 390 312 109 33 chr13 29469252 29469464 -90814848 + ORR1E LTR MaLR 26 254 -105 9 809 315 0 0 0 chr13 29469725 29469760 -90814552 + (GGCTG)n Simple_repeat Simple_repeat 5 39 0 9 809 520 62 38 0 chr13 29469824 29469904 -90814408 + (TATG)n Simple_repeat Simple_repeat 3 85 0 9 809 712 209 0 30 chr13 29469946 29470079 -90814233 - B1_Mur1 SINE Alu -20 129 1 9 809 766 226 82 43 chr13 29470337 29470545 -90813767 + B3 SINE B2 1 216 0 9 809 252 348 60 37 chr13 29471588 29471803 -90812509 + L2 LINE L2 2694 2913 -506 9 809 300 283 70 9 chr13 29471838 29471953 -90812359 - L1MD LINE L1 -654 5790 5669 9 809 431 316 72 0 chr13 29472534 29472686 -90811626 - RSINE1 SINE B4 0 165 3 9 809 589 250 0 0 chr13 29473065 29473189 -90811123 - RSINE1 SINE B4 -29 136 13 9 809 311 250 83 33 chr13 29473335 29473455 -90810857 + B1F SINE Alu 12 137 -12 9 809 1817 187 13 21 chr13 29474161 29474321 -90809991 + ORR1D1 LTR MaLR 1 159 -215 9 809 186 43 0 0 chr13 29474321 29474344 -90809968 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 9 809 1817 187 13 21 chr13 29474344 29474560 -90809752 + ORR1D1 LTR MaLR 160 373 -1 9 809 316 292 33 11 chr13 29475335 29475425 -90808887 + B4 SINE B4 1 92 -200 9 809 302 323 21 31 chr13 29475583 29475679 -90808633 + B4 SINE B4 195 289 -3 9 809 560 14 14 0 chr13 29476270 29476339 -90807973 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 9 809 216 67 0 0 chr13 29476347 29476377 -90807935 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 9 809 541 272 23 23 chr13 29476377 29476505 -90807807 - ID_B1 SINE B4 -15 209 82 9 809 195 188 0 0 chr13 29476548 29476596 -90807716 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 809 1200 117 147 5 chr13 29476962 29477160 -90807152 - URR1A DNA MER1_type 0 226 1 9 809 312 242 164 13 chr13 29477749 29477908 -90806404 + MLT1A1 LTR MaLR 20 202 -206 9 809 303 276 18 37 chr13 29477955 29478064 -90806248 + MLT1A1 LTR MaLR 259 365 0 9 809 339 85 0 0 chr13 29478143 29478190 -90806122 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 809 330 337 138 8 chr13 29478315 29478569 -90805743 - B4A SINE B4 -4 288 2 9 809 1877 9 0 0 chr13 29479583 29479794 -90804518 + L1Md_A LINE L1 6371 6581 -1 9 809 257 236 18 0 chr13 29480233 29480288 -90804024 + CT-rich Low_complexity Low_complexity 3 58 0 9 809 213 204 0 83 chr13 29480301 29480349 -90803963 - ID4 SINE ID -23 60 17 9 809 559 298 31 127 chr13 29480681 29481035 -90803277 + MTEb LTR MaLR 60 379 0 9 809 189 0 0 0 chr13 29482446 29482467 -90801845 + (CA)n Simple_repeat Simple_repeat 2 22 0 9 809 13537 105 64 6 chr13 29483118 29484569 -90799743 + L1_Mur2 LINE L1 3158 4732 -1145 9 809 180 0 0 0 chr13 29484569 29484589 -90799723 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 9 809 13537 105 64 6 chr13 29484589 29485109 -90799203 + L1_Mur2 LINE L1 4733 5251 -626 9 809 2307 79 0 19 chr13 29485109 29485432 -90798880 + L1Md_F2 LINE L1 6261 6577 -5 9 809 13537 105 64 6 chr13 29485432 29485577 -90798735 + L1_Mur2 LINE L1 5252 5398 -479 9 809 273 151 0 54 chr13 29485582 29485638 -90798674 + L1_Mur1 LINE L1 4713 4765 -1121 9 809 3990 147 176 28 chr13 29485645 29486442 -90797870 + Lx4B LINE L1 6108 7022 -36 9 809 231 294 67 29 chr13 29486979 29487084 -90797228 - L2c LINE L2 -4 3383 3275 9 809 288 0 0 0 chr13 29487117 29487149 -90797163 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 809 360 0 0 0 chr13 29487149 29487188 -90797124 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 809 21 36 0 0 chr13 29487944 29487972 -90796340 + AT_rich Low_complexity Low_complexity 1 28 0 9 809 219 293 19 48 chr13 29488286 29488390 -90795922 - MIRb SINE MIR -75 193 93 9 809 916 239 19 19 chr13 29488722 29488931 -90795381 - B3 SINE B2 -6 210 2 9 809 274 281 88 39 chr13 29488983 29489149 -90795163 - LTR85a LTR Gypsy? -553 231 32 9 809 514 268 104 30 chr13 29489862 29490093 -90794219 + B4A SINE B4 17 264 -28 9 809 535 190 48 24 chr13 29490761 29490885 -90793427 - B1_Mur1 SINE Alu -7 142 16 9 810 225 0 0 0 chr13 29491214 29491239 -90793073 + (GA)n Simple_repeat Simple_repeat 1 25 0 9 810 647 256 39 29 chr13 29492376 29492581 -90791731 - ID_B1 SINE B4 -17 207 1 9 810 333 0 0 0 chr13 29493167 29493204 -90791108 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 810 1172 68 0 0 chr13 29493797 29493943 -90790369 + B1_Mus1 SINE Alu 3 148 0 9 810 466 272 88 6 chr13 29494126 29494285 -90790027 - B4A SINE B4 -76 216 45 9 810 194 62 31 0 chr13 29494365 29494397 -90789915 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 9 810 390 254 228 16 chr13 29495828 29496012 -90788300 - ID_B1 SINE B4 0 224 2 9 810 615 27 0 0 chr13 29496313 29496386 -90787926 + (TC)n Simple_repeat Simple_repeat 1 73 0 9 810 447 335 58 21 chr13 29497706 29497895 -90786417 - B4A SINE B4 -14 278 83 9 810 507 269 82 68 chr13 29498385 29498592 -90785720 - B4 SINE B4 -1 291 82 9 810 228 311 64 43 chr13 29499905 29499999 -90784313 + RMER30 DNA MER1_type 8 103 -99 9 810 204 111 0 0 chr13 29500000 29500036 -90784276 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 1 810 272 163 0 0 chr13 29501531 29501580 -90782732 - MER20B DNA MER1_type -645 138 90 2 810 292 330 0 22 chr13 29503410 29503500 -90780812 + polypurine Low_complexity Low_complexity 3 90 0 3 810 293 280 13 0 chr13 29503656 29503731 -90780581 + ID4_ SINE ID 2 77 -6 4 810 264 241 15 13 chr13 29503731 29503865 -90780447 + GA-rich Low_complexity Low_complexity 1 134 0 5 810 324 70 0 0 chr13 29504942 29504985 -90779327 + (GGA)n Simple_repeat Simple_repeat 3 45 0 6 810 201 74 0 0 chr13 29504983 29505010 -90779302 + (CGA)n Simple_repeat Simple_repeat 2 28 0 7 810 424 217 0 0 chr13 29505611 29505703 -90778609 + Lx9 LINE L1 7391 7482 -162 8 810 690 324 59 4 chr13 29505845 29506118 -90778194 + B4 SINE B4 2 289 -3 9 810 515 278 60 43 chr13 29509962 29510146 -90774166 + B3A SINE B2 1 187 -29 1 810 22 0 0 0 chr13 29510146 29510168 -90774144 + AT_rich Low_complexity Low_complexity 1 22 0 1 810 186 133 0 0 chr13 29510231 29510261 -90774051 + (TTTTC)n Simple_repeat Simple_repeat 5 34 0 1 810 1115 90 0 0 chr13 29510261 29510406 -90773906 - B1_Mus2 SINE Alu 0 147 3 1 810 500 207 9 0 chr13 29510890 29511006 -90773306 + GA-rich Low_complexity Low_complexity 1 117 0 1 810 494 79 45 0 chr13 29511229 29511318 -90772994 + (TATG)n Simple_repeat Simple_repeat 4 96 0 1 810 505 222 25 33 chr13 29511330 29511451 -90772861 - B1F2 SINE Alu -29 120 1 1 810 572 218 12 98 chr13 29511534 29511707 -90772605 - RSINE1 SINE B4 -1 164 7 1 810 1073 238 48 3 chr13 29511989 29512284 -90772028 - RCHARR1 DNA MER1_type -3 971 664 1 810 550 224 14 7 chr13 29512283 29512431 -90771881 - RCHARR1 DNA MER1_type -492 482 334 1 810 389 295 78 6 chr13 29512439 29512606 -90771706 - B4A SINE B4 -113 179 1 1 810 296 329 13 40 chr13 29513787 29513936 -90770376 - MIRb SINE MIR -15 253 109 2 810 271 330 22 0 chr13 29514265 29514356 -90769956 - ID_B1 SINE B4 -16 208 116 2 810 558 71 0 0 chr13 29514989 29515073 -90769239 + (CA)n Simple_repeat Simple_repeat 1 84 0 2 810 932 41 124 0 chr13 29515603 29515724 -90768588 + B1_Mus1 SINE Alu 1 136 -12 2 810 495 0 0 0 chr13 29515726 29515781 -90768531 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 2 810 247 324 0 0 chr13 29516789 29516863 -90767449 + MER5B DNA MER1_type 105 178 0 2 810 533 309 62 5 chr13 29517540 29517732 -90766580 + B3 SINE B2 3 205 -11 2 810 1422 213 15 21 chr13 29519904 29520101 -90764211 - ORR1D1 LTR MaLR 0 374 177 2 810 666 0 0 0 chr13 29520101 29520175 -90764137 + (GA)n Simple_repeat Simple_repeat 2 75 0 2 810 1422 213 15 21 chr13 29520175 29520313 -90763999 - ORR1D1 LTR MaLR -198 176 41 2 810 293 357 92 14 chr13 29520738 29521022 -90763290 + L1MC4a LINE L1 5598 5903 -1979 2 810 339 194 42 0 chr13 29522567 29522639 -90761673 + B1F SINE Alu 24 98 -51 3 810 665 56 11 0 chr13 29523481 29523571 -90760741 + (TTCC)n Simple_repeat Simple_repeat 1 91 0 3 810 377 262 24 32 chr13 29523612 29523738 -90760574 - B3A SINE B2 -42 156 32 3 810 276 299 70 41 chr13 29523873 29524044 -90760268 - MER53 DNA hAT -16 177 2 3 810 549 0 0 0 chr13 29524716 29524777 -90759535 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 810 233 216 20 0 chr13 29525219 29525270 -90759042 + MIR SINE MIR 78 129 -133 3 810 198 71 0 0 chr13 29525310 29525338 -90758974 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 3 810 753 124 11 33 chr13 29525384 29525568 -90758744 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 810 481 321 8 22 chr13 29525577 29525711 -90758601 - RSINE1 SINE B4 -3 162 31 3 810 252 0 0 0 chr13 29527283 29527311 -90757001 + (TAA)n Simple_repeat Simple_repeat 3 30 0 3 810 673 245 67 43 chr13 29527316 29527525 -90756787 + B3 SINE B2 3 216 0 4 810 411 243 201 73 chr13 29527535 29527739 -90756573 + B4A SINE B4 21 250 -42 4 810 243 0 0 0 chr13 29527793 29527820 -90756492 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 810 451 266 159 36 chr13 29528052 29528247 -90756065 - B4 SINE B4 -73 219 1 4 810 1327 71 11 42 chr13 29528477 29528667 -90755645 - B2_Mm2 SINE B2 -7 188 5 4 810 324 0 0 0 chr13 29528738 29528774 -90755538 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 810 11409 58 1 1 chr13 29531144 29532553 -90751759 + L1Md_F2 LINE L1 4179 5586 -297 4 810 8275 47 3 0 chr13 29532553 29533544 -90750768 + L1Md_F2 LINE L1 5587 6580 -2 4 810 806 233 59 10 chr13 29534731 29534935 -90749377 - B3 SINE B2 -2 214 1 4 810 297 51 0 0 chr13 29534939 29534978 -90749334 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 810 982 132 0 0 chr13 29534978 29535114 -90749198 - B1_Mus1 SINE Alu -10 138 3 4 810 908 153 134 30 chr13 29536104 29536306 -90748006 - URR1B DNA MER1_type 0 225 3 5 810 435 246 36 0 chr13 29537090 29537200 -90747112 - PB1D9 SINE Alu -6 114 1 5 810 180 0 0 0 chr13 29537347 29537367 -90746945 + (CCCCCA)n Simple_repeat Simple_repeat 1 20 0 5 810 729 322 33 7 chr13 29538919 29539191 -90745121 + B4 SINE B4 2 280 -12 5 810 325 279 60 0 chr13 29539236 29539371 -90744941 + MER58A DNA MER1_type 59 208 -16 5 810 270 0 0 0 chr13 29539825 29539855 -90744457 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 810 601 151 8 42 chr13 29540479 29540597 -90743715 + B1_Mur3 SINE Alu 36 149 0 5 810 188 288 209 9 chr13 29541562 29541667 -90742645 - MER5B DNA MER1_type -49 129 4 5 810 189 147 0 0 chr13 29542299 29542333 -90741979 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 5 810 263 227 571 0 chr13 29543496 29543615 -90740697 + B3 SINE B2 2 188 -28 5 810 481 274 48 0 chr13 29545125 29545271 -90739041 - MER2B DNA MER2_type -13 323 171 6 810 1830 206 36 34 chr13 29545751 29546169 -90738143 - MTD LTR MaLR 0 419 1 6 810 279 269 15 0 chr13 29548292 29548359 -90735953 - ID4_ SINE ID 0 83 16 6 810 1266 308 116 65 chr13 29548935 29550160 -90734152 - L1M3 LINE L1 -1176 4964 3677 6 810 331 321 376 12 chr13 29550291 29550637 -90733675 - HAL1 LINE L1 -585 1922 1451 6 810 473 346 96 26 chr13 29550783 29551314 -90732998 - HAL1 LINE L1 -1332 1175 608 6 810 814 273 68 45 chr13 29551627 29551938 -90732374 - MER2 DNA MER2_type -20 325 8 6 810 21 0 0 0 chr13 29554871 29554892 -90729420 + AT_rich Low_complexity Low_complexity 1 21 0 6 810 11036 109 29 10 chr13 29555282 29557943 -90726369 + Lx3C LINE L1 4261 6976 0 6 810 923 191 102 15 chr13 29558443 29558640 -90725672 - B3 SINE B2 -2 214 1 6 810 279 218 65 65 chr13 29560162 29560255 -90724057 + RCHARR1 DNA MER1_type 35 127 -847 6 810 367 292 8 74 chr13 29560398 29560520 -90723792 - PB1D10 SINE Alu -3 114 1 7 810 302 270 158 63 chr13 29560562 29560847 -90723465 - MLT1D LTR MaLR -96 409 98 7 810 482 240 96 27 chr13 29560853 29561062 -90723250 + Lx LINE L1 5635 5827 -1869 7 810 238 206 107 54 chr13 29561088 29561235 -90723077 + Lx LINE L1 6002 6267 -33 7 810 214 267 0 0 chr13 29561917 29561962 -90722350 + polypyrimidine Low_complexity Low_complexity 1 45 0 7 810 354 279 9 9 chr13 29561964 29562069 -90722243 - PB1D10 SINE Alu -8 109 5 7 810 1152 68 7 0 chr13 29562073 29562219 -90722093 - B1_Mus1 SINE Alu 0 148 2 7 810 210 91 0 0 chr13 29562516 29562549 -90721763 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 7 810 247 218 230 0 chr13 29564162 29564249 -90720063 + MLT1C LTR MaLR 14 120 -347 7 810 371 272 99 13 chr13 29564575 29564805 -90719507 + L1MC LINE L1 5199 5443 -901 7 810 220 282 45 9 chr13 29565797 29565908 -90718404 + (TAGA)n Simple_repeat Simple_repeat 1 115 0 7 810 239 312 14 2 chr13 29566003 29566109 -90718203 - ID2 SINE ID -45 107 1 8 810 29 0 0 0 chr13 29567789 29567818 -90716494 + AT_rich Low_complexity Low_complexity 1 29 0 8 810 248 143 0 0 chr13 29567900 29567942 -90716370 - HAL1 LINE L1 -1196 1311 1270 8 810 23 0 0 0 chr13 29568085 29568108 -90716204 + AT_rich Low_complexity Low_complexity 1 23 0 8 810 745 194 160 11 chr13 29568366 29568554 -90715758 - B3 SINE B2 0 216 1 8 810 272 266 106 0 chr13 29569820 29569914 -90714398 - MamRep434 DNA TcMar -220 206 103 8 810 385 218 39 0 chr13 29570458 29570536 -90713776 + ID SINE ID 2 82 -142 8 810 232 361 52 15 chr13 29570614 29570749 -90713563 - B1F SINE Alu 0 149 10 8 810 272 314 57 0 chr13 29571395 29571500 -90712812 - MIRc SINE MIR -152 116 6 8 810 603 269 38 19 chr13 29572316 29572528 -90711784 + B3 SINE B2 1 216 0 8 810 223 154 0 0 chr13 29572945 29572984 -90711328 + PB1D7 SINE Alu 73 111 -9 9 810 484 270 31 8 chr13 29575031 29575103 -90709209 + ID SINE ID 7 81 -143 9 810 243 290 0 0 chr13 29575103 29575165 -90709147 + PB1D7 SINE Alu 1 62 -58 9 810 291 365 20 41 chr13 29575362 29575559 -90708753 + MER58A DNA MER1_type 4 196 -28 9 810 259 282 68 34 chr13 29577016 29577104 -90707208 + MLT1A LTR MaLR 210 300 -74 9 810 867 241 85 12 chr13 29577209 29577457 -90706855 + B4A SINE B4 11 276 -16 9 810 306 0 0 0 chr13 29578172 29578206 -90706106 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 810 183 42 0 0 chr13 29579287 29579311 -90705001 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 810 382 256 53 93 chr13 29580252 29580403 -90703909 + RSINE1 SINE B4 20 164 -1 9 810 31 0 0 0 chr13 29580415 29580446 -90703866 + AT_rich Low_complexity Low_complexity 1 31 0 9 810 423 235 0 0 chr13 29580476 29580557 -90703755 + ID4 SINE ID 2 82 -1 1 810 288 130 0 0 chr13 29580561 29580607 -90703705 + (CAAG)n Simple_repeat Simple_repeat 2 47 0 1 810 228 145 56 28 chr13 29580608 29580620 -90703692 + (CAAAC)n Simple_repeat Simple_repeat 2 13 0 1 810 351 0 0 0 chr13 29580620 29580659 -90703653 + (CAA)n Simple_repeat Simple_repeat 2 40 0 1 810 228 145 56 28 chr13 29580659 29580717 -90703595 + (CAAAC)n Simple_repeat Simple_repeat 4 62 0 1 810 21 36 0 0 chr13 29581252 29581280 -90703032 + AT_rich Low_complexity Low_complexity 1 28 0 1 810 23 54 0 0 chr13 29581949 29581986 -90702326 + AT_rich Low_complexity Low_complexity 1 37 0 1 810 207 98 48 24 chr13 29582700 29582742 -90701570 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 810 340 330 14 66 chr13 29584416 29584627 -90699685 - MER3 DNA MER1_type -1 208 9 1 810 252 222 0 16 chr13 29584654 29584718 -90699594 - ID4 SINE ID -16 67 5 1 810 391 301 21 35 chr13 29584733 29584874 -90699438 - B1F1 SINE Alu -2 147 9 1 810 1219 49 0 0 chr13 29585128 29585272 -90699040 - B1_Mus1 SINE Alu 0 148 5 1 810 412 303 110 26 chr13 29585645 29585903 -90698409 + Cheshire DNA MER1_type 895 1177 -1243 1 810 956 198 63 19 chr13 29585903 29586109 -90698203 + B3 SINE B2 2 216 0 1 810 412 303 110 26 chr13 29586109 29586158 -90698154 + Cheshire DNA MER1_type 1178 1228 -1192 1 810 259 336 132 4 chr13 29586995 29587222 -90697090 + Cheshire DNA MER1_type 1405 1660 -760 1 810 340 349 73 52 chr13 29587223 29587495 -90696817 + B4 SINE B4 3 280 -12 1 810 497 290 30 0 chr13 29587540 29587671 -90696641 + RSINE1 SINE B4 3 137 -28 1 810 311 317 20 0 chr13 29587791 29587892 -90696420 + Cheshire DNA MER1_type 1750 1852 -568 1 810 237 154 0 0 chr13 29587928 29587980 -90696332 + B3 SINE B2 165 216 0 1 810 313 240 27 0 chr13 29590003 29590078 -90694234 + ID4_ SINE ID 3 79 -4 1 810 505 361 95 34 chr13 29590787 29591260 -90693052 + MLT1E3 LTR MaLR 7 508 -116 1 810 1995 147 75 7 chr13 29591263 29591655 -90692657 + MTC LTR MaLR 1 396 -25 1 810 267 279 46 11 chr13 29591920 29592007 -90692305 - ID_B1 SINE B4 -7 217 128 1 810 201 171 0 0 chr13 29592057 29592092 -90692220 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 810 216 97 0 0 chr13 29592198 29592229 -90692083 + (TCCC)n Simple_repeat Simple_repeat 1 31 0 1 810 423 132 0 0 chr13 29592273 29592341 -90691971 + (TCCC)n Simple_repeat Simple_repeat 4 71 0 1 810 494 115 0 22 chr13 29592663 29592752 -90691560 + (TCCC)n Simple_repeat Simple_repeat 1 87 0 1 810 3400 40 2 0 chr13 29592757 29593152 -90691160 - MTA_Mm LTR MaLR 0 396 1 1 810 756 272 19 33 chr13 29593472 29593683 -90690629 + MLT1B LTR MaLR 165 388 -2 1 810 255 173 0 0 chr13 29595366 29595418 -90688894 + A-rich Low_complexity Low_complexity 2 53 0 1 810 441 0 0 0 chr13 29597793 29597842 -90686470 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 810 189 0 0 0 chr13 29597842 29597862 -90686450 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 810 290 26 26 0 chr13 29597866 29597905 -90686407 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 810 257 214 0 0 chr13 29598348 29598404 -90685908 + B4 SINE B4 218 273 -19 1 810 262 226 75 42 chr13 29598688 29598703 -90685609 + CYRA11_Mm Unknown Y-chromosome 155 173 -444 1 810 556 142 19 9 chr13 29598703 29598810 -90685502 - URR1B DNA MER1_type 0 225 118 1 810 212 312 12 12 chr13 29598966 29599047 -90685265 + ID_B1 SINE B4 90 170 -54 1 810 272 359 19 10 chr13 29600575 29600679 -90683633 + MLT1J LTR MaLR 239 343 -169 1 810 282 56 0 0 chr13 29600855 29600891 -90683421 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 810 265 328 32 79 chr13 29601220 29601346 -90682966 - PB1D10 SINE Alu 0 120 1 1 810 450 0 0 0 chr13 29601474 29601524 -90682788 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 810 652 253 39 12 chr13 29601876 29602074 -90682238 + B3A SINE B2 2 212 -4 1 810 971 199 60 7 chr13 29602374 29602721 -90681591 + MT2A LTR ERVL 115 529 -4 1 810 267 312 0 0 chr13 29602850 29602930 -90681382 - MTE2a-int LTR MaLR -738 842 763 1 810 1175 250 92 11 chr13 29603037 29603405 -90680907 - MTE2a-int LTR MaLR -1179 401 4 1 810 537 222 451 0 chr13 29603409 29603666 -90680646 - MTE2a LTR MaLR -2 377 5 1 810 754 249 139 71 chr13 29603800 29604094 -90680218 - MTEa LTR MaLR -60 319 6 1 810 249 236 0 18 chr13 29604168 29604224 -90680088 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 1 810 285 317 108 10 chr13 29605323 29605425 -90678887 - PB1D7 SINE Alu -7 113 2 1 810 22 0 0 0 chr13 29609658 29609680 -90674632 + AT_rich Low_complexity Low_complexity 1 22 0 1 810 393 117 0 0 chr13 29609923 29609983 -90674329 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 810 1178 48 0 39 chr13 29610608 29610761 -90673551 - B1_Mm SINE Alu 0 147 1 1 810 4122 69 29 11 chr13 29610986 29611542 -90672770 - L1_Mus3 LINE L1 -5 6633 6068 1 810 216 281 62 0 chr13 29611775 29611839 -90672473 + MIR SINE MIR 110 177 -85 1 810 683 302 28 5 chr13 29612235 29612448 -90671864 + ID_B1 SINE B4 2 219 -5 1 810 343 250 8 115 chr13 29612791 29612913 -90671399 + RSINE1 SINE B4 16 124 -41 1 810 390 21 0 0 chr13 29612913 29612960 -90671352 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 810 239 299 0 15 chr13 29613401 29613469 -90670843 + B2_Mm2 SINE B2 5 71 -124 1 810 790 273 38 7 chr13 29613554 29613852 -90670460 - Lx8 LINE L1 -1556 5917 5626 1 810 502 297 61 34 chr13 29613825 29614121 -90670191 - L1MB3 LINE L1 -42 6141 5838 1 810 1035 66 0 0 chr13 29616304 29616440 -90667872 + (GAA)n Simple_repeat Simple_repeat 2 137 0 1 810 322 299 162 15 chr13 29617074 29617271 -90667041 + MER95 LTR ERV 1 226 -205 1 810 349 318 9 0 chr13 29617422 29617529 -90666783 + PB1D10 SINE Alu 3 110 -7 1 810 1219 62 7 0 chr13 29617615 29617760 -90666552 - B1_Mus2 SINE Alu -1 146 1 1 810 276 268 99 0 chr13 29618209 29618280 -90666032 - PB1D10 SINE Alu -37 80 3 1 810 379 200 102 184 chr13 29618439 29618586 -90665726 + B1_Mur1 SINE Alu 5 139 -10 1 810 292 262 75 0 chr13 29619070 29619150 -90665162 + LTR48 LTR ERV1 170 255 -532 1 810 2337 166 70 5 chr13 29619156 29619587 -90664725 + Lx LINE L1 6192 6650 -4 1 810 510 17 0 0 chr13 29619595 29619654 -90664658 + (GGAA)n Simple_repeat Simple_repeat 3 61 0 1 810 838 199 0 14 chr13 29620599 29620747 -90663565 + B1_Mur2 SINE Alu 2 147 -2 1 810 6323 67 16 1 chr13 29621288 29622233 -90662079 - L1_Mus1 LINE L1 -585 5982 5017 1 101 4747 68 11 0 chr13 29622233 29622849 -90661463 + L1_Mus1 LINE L1 5990 6567 0 1 811 366 311 96 7 chr13 29622947 29623083 -90661229 - Tigger5 DNA MER2_type -2162 244 97 1 811 504 0 0 0 chr13 29623918 29623974 -90660338 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 811 243 79 0 0 chr13 29623974 29624012 -90660300 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 811 458 309 29 0 chr13 29624021 29624157 -90660155 - B4A SINE B4 0 292 153 1 811 513 271 8 0 chr13 29624156 29624274 -90660038 + MTE2b LTR MaLR 259 377 -2 1 811 306 0 0 0 chr13 29624808 29624842 -90659470 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 811 196 321 64 28 chr13 29626069 29626178 -90658134 - MIRc SINE MIR -110 158 46 1 811 337 350 115 49 chr13 29626650 29627040 -90657272 + L1ME3 LINE L1 5607 6022 -140 1 811 546 312 24 94 chr13 29627336 29627548 -90656764 - B3A SINE B2 0 198 2 1 811 478 238 269 3 chr13 29627587 29627870 -90656442 + L1MC1 LINE L1 5769 6126 -207 1 811 242 143 52 0 chr13 29628058 29628135 -90656177 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 811 1745 94 4 0 chr13 29628162 29628406 -90655906 + MTB_Mm LTR MaLR 1 245 -162 1 811 1090 267 119 28 chr13 29629626 29630170 -90654142 + L1M4 LINE L1 3 596 -5946 1 811 297 206 0 0 chr13 29630214 29630306 -90654006 + CT-rich Low_complexity Low_complexity 1 92 0 1 811 459 346 73 41 chr13 29630366 29630682 -90653630 + L1M4 LINE L1 641 966 -5576 1 811 15878 68 4 7 chr13 29630758 29633475 -90650837 - L1Md_F2 LINE L1 -12 6570 3861 1 811 2713 120 10 0 chr13 29633483 29633891 -90650421 - L1Md_F2 LINE L1 -5725 891 480 1 811 1376 105 5 9 chr13 29633891 29634102 -90650210 - L1VL1 LINE L1 -6156 266 57 1 811 287 278 174 10 chr13 29634202 29634496 -90649816 + L1M4 LINE L1 1137 1478 -5064 1 811 585 28 0 0 chr13 29634571 29634642 -90649670 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 811 328 379 106 22 chr13 29634705 29635064 -90649248 + L1M4 LINE L1 1672 2060 -4586 1 811 25 31 0 0 chr13 29635546 29635578 -90648734 + AT_rich Low_complexity Low_complexity 1 32 0 1 811 251 339 48 16 chr13 29635667 29635793 -90648519 + MLT1C LTR MaLR 286 415 -52 1 811 447 208 194 19 chr13 29635868 29635971 -90648341 + B3A SINE B2 1 121 -77 1 811 369 233 252 0 chr13 29635974 29636077 -90648235 - ID_B1 SINE B4 -46 178 50 1 811 310 254 0 0 chr13 29636395 29636454 -90647858 - B1F SINE Alu -56 93 35 1 811 254 0 87 0 chr13 29636581 29636627 -90647685 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 811 692 197 387 41 chr13 29636660 29636966 -90647346 + MTD LTR MaLR 1 412 -7 1 811 369 0 0 0 chr13 29637313 29637354 -90646958 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 811 459 0 0 0 chr13 29638038 29638089 -90646223 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 811 500 248 0 161 chr13 29639224 29639373 -90644939 - B3 SINE B2 0 216 69 1 811 417 39 0 0 chr13 29639503 29639554 -90644758 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 811 327 146 0 0 chr13 29639839 29639894 -90644418 + (T)n Simple_repeat Simple_repeat 1 55 0 1 811 311 228 238 0 chr13 29640474 29640575 -90643737 + Lx5 LINE L1 6922 7046 -4 1 811 370 66 32 16 chr13 29640593 29640655 -90643657 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1 811 318 154 166 1 chr13 29640850 29640924 -90643388 - B1_Mur4 SINE Alu -34 86 2 1 811 198 71 0 0 chr13 29641500 29641528 -90642784 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 811 23 0 0 0 chr13 29642555 29642578 -90641734 + AT_rich Low_complexity Low_complexity 1 23 0 1 811 518 288 58 35 chr13 29642578 29642751 -90641561 - B3A SINE B2 -21 177 1 2 811 207 69 0 0 chr13 29643438 29643467 -90640845 + (A)n Simple_repeat Simple_repeat 1 29 0 2 811 762 263 14 67 chr13 29643542 29643750 -90640562 + B3A SINE B2 2 198 0 2 811 436 176 165 10 chr13 29643752 29643855 -90640457 + B1_Mus2 SINE Alu 2 120 -27 2 811 236 217 31 62 chr13 29643963 29644027 -90640285 - LTR48B LTR ERV1 -289 355 294 2 811 288 0 0 0 chr13 29644855 29644887 -90639425 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2 811 420 303 29 36 chr13 29644920 29645057 -90639255 + B1F SINE Alu 12 147 -2 2 811 24 0 0 0 chr13 29645573 29645597 -90638715 + AT_rich Low_complexity Low_complexity 1 24 0 2 811 493 200 161 32 chr13 29645772 29645896 -90638416 + B1_Mur1 SINE Alu 1 140 -9 2 811 22 35 0 0 chr13 29646021 29646050 -90638262 + AT_rich Low_complexity Low_complexity 1 29 0 2 811 243 280 139 10 chr13 29646054 29646155 -90638157 + Lx8 LINE L1 6948 7061 -412 2 811 349 252 122 32 chr13 29646794 29646917 -90637395 - B1F SINE Alu -13 136 3 2 811 645 324 27 47 chr13 29648825 29649123 -90635189 + B4A SINE B4 1 292 0 2 811 183 42 0 0 chr13 29649260 29649284 -90635028 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 811 297 374 0 0 chr13 29649802 29649901 -90634411 - PB1D10 SINE Alu -7 110 12 2 811 336 293 191 53 chr13 29651169 29651566 -90632746 + L1MEc LINE L1 136 587 -5813 2 811 319 245 52 21 chr13 29651629 29651725 -90632587 + L1MEc LINE L1 648 746 -5654 2 811 765 33 0 0 chr13 29651728 29651820 -90632492 + (GA)n Simple_repeat Simple_repeat 1 92 0 2 811 239 333 71 12 chr13 29652050 29652135 -90632177 + PB1D10 SINE Alu 11 100 -17 2 811 272 245 81 7 chr13 29652743 29652891 -90631421 + L1MEc LINE L1 2086 2244 -4171 2 811 241 254 14 29 chr13 29653405 29653474 -90630838 + PB1D10 SINE Alu 14 81 -36 2 811 221 253 41 112 chr13 29653474 29653503 -90630809 + B4A SINE B4 99 189 -103 2 811 365 349 36 5 chr13 29654060 29654279 -90630033 + Charlie5 DNA MER1_type 2398 2623 -1 2 811 268 271 106 63 chr13 29655124 29655266 -90629046 + L2a LINE L2 3279 3426 0 2 811 393 336 27 40 chr13 29655602 29655751 -90628561 + MTE2a LTR MaLR 17 163 -216 2 811 318 171 229 12 chr13 29655751 29655834 -90628478 + Lx9 LINE L1 6988 7088 -556 2 811 1157 59 0 0 chr13 29656192 29656327 -90627985 - B1_Mus2 SINE Alu -11 136 2 2 811 211 255 0 19 chr13 29656584 29656636 -90627676 - B1F SINE Alu -78 71 21 2 811 454 129 0 23 chr13 29656764 29656851 -90627461 + G-rich Low_complexity Low_complexity 2 86 0 2 811 222 118 0 0 chr13 29657310 29657344 -90626968 + (A)n Simple_repeat Simple_repeat 1 34 0 2 811 1709 31 0 15 chr13 29659223 29659418 -90624894 + B2_Mm1a SINE B2 2 193 0 2 811 261 202 75 0 chr13 29662498 29662592 -90621720 + (CAAA)n Simple_repeat Simple_repeat 4 104 0 2 811 347 287 46 9 chr13 29663311 29663420 -90620892 - RMER15 LTR ERVL -42 533 421 2 811 778 122 122 0 chr13 29663886 29664017 -90620295 + B1_Mus1 SINE Alu 2 148 0 2 811 658 237 7 7 chr13 29664815 29664955 -90619357 - B1_Mur1 SINE Alu -1 148 9 2 811 272 301 22 115 chr13 29664840 29664979 -90619333 - MT2B LTR ERVL -323 278 153 2 811 701 275 129 36 chr13 29667626 29667958 -90616354 - MLT1A0 LTR MaLR 0 365 3 2 811 446 302 34 34 chr13 29669178 29669345 -90614967 - L1MD2 LINE L1 -447 5912 5746 2 811 2340 142 72 23 chr13 29669345 29669776 -90614536 + Lx2B LINE L1 6545 6996 -4 2 811 446 302 34 34 chr13 29669776 29669841 -90614471 - L1MD2 LINE L1 -614 5745 5680 2 811 544 310 114 29 chr13 29669898 29670204 -90614108 + MLT2D LTR ERVL 14 345 -69 2 811 29 28 0 0 chr13 29670204 29670240 -90614072 + AT_rich Low_complexity Low_complexity 1 36 0 2 811 450 75 0 0 chr13 29670265 29670332 -90613980 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 811 495 0 0 0 chr13 29670332 29670387 -90613925 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 811 234 253 56 112 chr13 29673040 29673147 -90611165 + MTEa LTR MaLR 122 222 -157 2 811 594 0 0 0 chr13 29673256 29673322 -90610990 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 2 811 1720 217 49 0 chr13 29675176 29675643 -90608669 + MT2A LTR ERVL 4 533 0 2 811 21 36 0 0 chr13 29675668 29675696 -90608616 + AT_rich Low_complexity Low_complexity 1 28 0 2 811 424 316 109 34 chr13 29676468 29676733 -90607579 + LTR33C LTR ERVL 117 401 -228 2 811 363 312 128 42 chr13 29676965 29677199 -90607113 - L1MB4 LINE L1 -39 6141 5882 2 811 6141 67 30 4 chr13 29677199 29677997 -90606315 - L1Md_F2 LINE L1 -12 6570 5752 2 811 363 202 2 1 chr13 29677997 29678058 -90606254 - L1MB4 LINE L1 -299 5881 5822 2 811 988 277 91 45 chr13 29678105 29678502 -90605810 - MTD LTR MaLR 0 419 5 2 811 417 286 126 28 chr13 29678517 29678906 -90605406 + L1M4c LINE L1 1926 2352 -4032 2 811 1518 305 105 41 chr13 29679250 29679907 -90604405 - L1M4c LINE L1 -5681 703 5 2 811 1041 158 108 47 chr13 29680544 29680756 -90603556 - URR1A DNA MER1_type 0 226 2 2 811 370 339 98 43 chr13 29680862 29681096 -90603216 + B4 SINE B4 41 287 -5 2 811 372 43 0 0 chr13 29681145 29681191 -90603121 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 811 279 390 0 0 chr13 29681755 29681850 -90602462 + L2 LINE L2 2798 2892 -527 2 811 389 299 83 5 chr13 29681866 29682071 -90602241 + L1ME3A LINE L1 5940 6160 -13 2 811 495 302 6 85 chr13 29683588 29683765 -90600547 + RSINE1 SINE B4 3 165 0 2 811 2852 154 93 16 chr13 29684584 29685299 -90599013 + RLTR25B LTR ERVK 1 860 -243 2 811 10226 44 0 0 chr13 29685311 29686529 -90597783 + L1Md_F2 LINE L1 4369 5586 -297 2 811 8114 51 1 1 chr13 29686530 29687513 -90596799 + L1Md_F2 LINE L1 5588 6570 -12 2 811 441 206 0 0 chr13 29687564 29687661 -90596651 + (TA)n Simple_repeat Simple_repeat 1 97 0 2 811 461 14 54 14 chr13 29688232 29688306 -90596006 + (CAAAA)n Simple_repeat Simple_repeat 4 80 0 2 811 214 306 0 0 chr13 29689108 29689170 -90595142 + B4A SINE B4 84 145 -147 2 811 305 317 0 0 chr13 29689118 29689200 -90595112 + PB1D10 SINE Alu 9 90 -27 2 811 240 331 57 16 chr13 29689200 29689216 -90595096 + ID_B1 SINE B4 90 189 -35 2 811 324 0 0 0 chr13 29689216 29689252 -90595060 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 811 240 331 57 16 chr13 29689259 29689276 -90595036 + ID_B1 SINE B4 190 217 -7 2 811 1352 105 5 16 chr13 29689670 29689864 -90594448 + B2_Mm1a SINE B2 1 192 -1 2 811 902 78 8 0 chr13 29689895 29690023 -90594289 + (GGAA)n Simple_repeat Simple_repeat 4 132 0 2 811 283 324 47 40 chr13 29691064 29691090 -90593222 + ID_B1 SINE B4 70 218 -6 2 811 435 238 57 0 chr13 29691090 29691212 -90593100 + B1F SINE Alu 15 143 -6 2 811 1019 246 97 64 chr13 29693700 29694104 -90590208 - MTD LTR MaLR -2 417 1 2 811 290 362 14 14 chr13 29694516 29694659 -90589653 - MIRb SINE MIR -88 180 38 2 811 301 275 76 11 chr13 29694671 29694763 -90589549 + B1F1 SINE Alu 1 98 -51 2 811 293 277 132 21 chr13 29694941 29695085 -90589227 + RSINE1 SINE B4 4 163 -2 2 811 418 258 208 0 chr13 29695278 29695437 -90588875 + B3 SINE B2 2 193 -23 2 811 495 0 0 0 chr13 29696487 29696542 -90587770 + (GA)n Simple_repeat Simple_repeat 1 55 0 2 811 291 279 122 34 chr13 29697473 29697669 -90586643 + MIR SINE MIR 34 235 -27 2 811 198 71 0 0 chr13 29697679 29697707 -90586605 + (CAGA)n Simple_repeat Simple_repeat 1 28 0 2 811 538 258 135 34 chr13 29698021 29698258 -90586054 - MLT1A0 LTR MaLR 0 365 105 2 811 21 0 0 0 chr13 29698490 29698511 -90585801 + AT_rich Low_complexity Low_complexity 1 21 0 2 811 665 264 30 133 chr13 29698959 29699356 -90584956 + MTEb LTR MaLR 11 366 -13 2 811 251 311 46 20 chr13 29699507 29699658 -90584654 + ORR1E LTR MaLR 19 173 -186 2 811 311 279 144 24 chr13 29700102 29700352 -90583960 + Charlie4a DNA MER1_type 51 330 -178 2 811 213 244 0 35 chr13 29705273 29705358 -90578954 + (CAG)n Simple_repeat Simple_repeat 1 82 0 2 811 583 235 18 31 chr13 29705639 29705829 -90578483 - B3A SINE B2 -10 183 1 2 811 196 346 51 0 chr13 29708132 29708210 -90576102 + MIRb SINE MIR 92 173 -95 2 811 978 223 266 34 chr13 29709019 29709316 -90574996 + ORR1D2 LTR MaLR 5 370 0 2 811 274 302 126 58 chr13 29709591 29709798 -90574514 - MLT1A1 LTR MaLR -3 405 185 2 811 320 282 110 8 chr13 29710118 29710236 -90574076 + MLT1A1 LTR MaLR 256 385 -23 2 811 639 270 0 0 chr13 29710243 29710380 -90573932 - B1_Mur1 SINE Alu -11 138 2 2 811 341 366 0 8 chr13 29710382 29710506 -90573806 - PB1 SINE Alu -2 125 3 2 811 939 120 0 0 chr13 29710906 29711073 -90573239 + (CA)n Simple_repeat Simple_repeat 2 168 0 2 811 367 344 0 15 chr13 29712702 29712835 -90571477 + ID_B1 SINE B4 80 210 -14 2 811 378 0 0 0 chr13 29713768 29713810 -90570502 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 811 213 265 118 0 chr13 29714842 29714910 -90569402 + B1_Mur1 SINE Alu 74 149 0 2 811 342 98 0 0 chr13 29717168 29717219 -90567093 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 811 300 37 18 36 chr13 29719036 29719092 -90565220 + (CAAAA)n Simple_repeat Simple_repeat 5 59 0 2 811 878 184 0 6 chr13 29720827 29721007 -90563305 + GA-rich Low_complexity Low_complexity 2 180 0 2 811 189 0 0 0 chr13 29721599 29721620 -90562692 + (A)n Simple_repeat Simple_repeat 1 21 0 2 811 611 286 103 60 chr13 29722505 29722739 -90561573 + B4A SINE B4 48 291 -1 2 811 2127 221 128 8 chr13 29723066 29723159 -90561153 - Lx9 LINE L1 -30 7614 7517 2 811 243 0 0 0 chr13 29723159 29723186 -90561126 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 811 2127 221 128 8 chr13 29723186 29723691 -90560621 - Lx9 LINE L1 -128 7516 6945 2 811 395 276 34 113 chr13 29724958 29724990 -90559322 - B2_Mm2 SINE B2 -5 190 162 3 811 513 0 0 0 chr13 29724990 29725047 -90559265 + (TC)n Simple_repeat Simple_repeat 2 58 0 3 811 288 0 0 0 chr13 29725047 29725078 -90559234 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 811 720 276 34 113 chr13 29725078 29725248 -90559064 - B3A SINE B2 -36 162 3 3 811 633 255 101 15 chr13 29725333 29725532 -90558780 + B3 SINE B2 1 216 0 3 811 225 0 0 0 chr13 29725978 29726003 -90558309 + (T)n Simple_repeat Simple_repeat 1 25 0 3 811 932 71 8 8 chr13 29726003 29726131 -90558181 - B1_Mm SINE Alu 0 147 20 3 811 723 319 72 37 chr13 29726208 29726801 -90557511 + L1MB3 LINE L1 5539 6152 -31 3 811 420 37 0 0 chr13 29726808 29726862 -90557450 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 811 484 331 30 8 chr13 29726874 29727008 -90557304 - B1F SINE Alu -12 137 1 3 811 523 117 0 21 chr13 29727127 29727223 -90557089 + (GGGGA)n Simple_repeat Simple_repeat 2 95 0 3 811 779 260 39 30 chr13 29728003 29728228 -90556084 - MTEa LTR MaLR -51 328 94 3 811 342 300 129 32 chr13 29728318 29728442 -90555870 - ID_B1 SINE B4 -86 138 3 3 811 181 183 33 0 chr13 29728664 29728724 -90555588 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 811 682 318 0 0 chr13 29728745 29728896 -90555416 + B3A SINE B2 1 151 -47 3 811 254 106 21 0 chr13 29728912 29728959 -90555353 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 811 214 217 150 0 chr13 29729496 29729568 -90554744 + PB1D7 SINE Alu 1 83 -66 3 811 803 227 40 130 chr13 29730692 29730915 -90553397 - B3 SINE B2 -11 205 3 3 811 422 150 20 0 chr13 29731076 29731176 -90553136 + (CAGAGA)n Simple_repeat Simple_repeat 1 102 0 3 811 947 291 75 12 chr13 29732326 29732646 -90551666 + Lx7 LINE L1 6839 7178 -518 3 811 227 289 93 37 chr13 29732780 29732942 -90551370 + Lx7 LINE L1 7514 7684 -12 3 811 186 225 0 0 chr13 29735417 29735457 -90548855 - MIRb SINE MIR -166 102 63 3 811 283 247 11 33 chr13 29735668 29735760 -90548552 + MIR SINE MIR 127 216 -46 3 811 477 0 0 0 chr13 29737253 29737306 -90547006 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 811 180 111 0 0 chr13 29737306 29737332 -90546980 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 811 597 28 0 0 chr13 29737930 29738001 -90546311 + (TC)n Simple_repeat Simple_repeat 1 71 0 3 811 344 283 40 32 chr13 29738307 29738431 -90545881 - B1F SINE Alu -12 137 13 3 811 318 336 7 67 chr13 29738431 29738457 -90545855 - ID_B1 SINE B4 -12 212 72 3 811 229 316 25 12 chr13 29739584 29739664 -90544648 + MLT1C LTR MaLR 73 153 -314 3 811 335 314 174 35 chr13 29740290 29740657 -90543655 + L1M5 LINE L1 3339 3756 -2390 3 811 642 275 132 47 chr13 29741070 29741707 -90542605 + L1MEc LINE L1 551 1241 -5159 3 811 363 293 110 74 chr13 29741790 29741987 -90542325 + L1MEc LINE L1 1392 1597 -4803 3 811 1298 61 0 0 chr13 29741987 29742134 -90542178 + B1_Mus1 SINE Alu 2 148 0 3 811 363 293 110 74 chr13 29742134 29742382 -90541930 + L1MEc LINE L1 1598 1853 -4547 3 811 344 304 154 32 chr13 29742732 29743617 -90540695 + L1MEc LINE L1 2331 3338 -2981 3 811 341 304 126 32 chr13 29744043 29744567 -90539745 + L1MEc LINE L1 3931 4503 -1816 3 811 1174 242 118 51 chr13 29745311 29745685 -90538627 + MTC LTR MaLR 2 400 -21 3 811 281 328 66 62 chr13 29745830 29746074 -90538238 - RMER15 LTR ERVL -6 569 325 3 811 1571 301 78 47 chr13 29746491 29747326 -90536986 - Cheshire DNA MER1_type -144 2276 1416 3 811 359 327 58 39 chr13 29747423 29747630 -90536682 - Cheshire DNA MER1_type -955 1465 1255 3 811 263 369 113 13 chr13 29748571 29748722 -90535590 - Cheshire DNA MER1_type -2251 169 4 3 811 347 259 178 11 chr13 29749007 29749097 -90535215 + B4A SINE B4 125 229 -63 3 811 8232 157 26 8 chr13 29749101 29750524 -90533788 - L1_Mus4 LINE L1 -373 5510 4062 3 811 6956 94 39 0 chr13 29750522 29751579 -90532733 + L1_Mus4 LINE L1 5508 6618 -18 3 811 414 0 0 0 chr13 29751693 29751739 -90532573 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 811 462 305 55 65 chr13 29751972 29752154 -90532158 + B4A SINE B4 83 262 -30 3 811 1813 157 73 85 chr13 29752154 29752552 -90531760 + ORR1B1 LTR MaLR 1 393 -1 3 811 462 305 55 65 chr13 29752552 29752569 -90531743 + B4A SINE B4 263 279 -13 3 811 291 282 130 32 chr13 29752684 29752838 -90531474 - B4 SINE B4 -6 286 118 3 812 319 293 104 36 chr13 29753533 29753784 -90530528 + L1ME2z LINE L1 6163 6430 -14 3 812 337 319 51 8 chr13 29754719 29754836 -90529476 + ORR1E LTR MaLR 5 126 -233 3 812 225 0 0 0 chr13 29755737 29755762 -90528550 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 3 812 317 339 116 50 chr13 29755813 29756211 -90528101 - L1ME1 LINE L1 -58 6121 5698 3 812 283 175 114 81 chr13 29756219 29756368 -90527944 - Lx9 LINE L1 0 7644 7491 3 812 872 297 7 53 chr13 29756506 29756790 -90527522 - Lx6 LINE L1 -105 7355 7085 3 812 388 297 121 15 chr13 29756867 29757263 -90527049 - L1MD LINE L1 -1524 4622 4185 3 812 2629 272 104 55 chr13 29757775 29758619 -90525693 - Lx6 LINE L1 -1574 6122 5219 3 812 1500 222 133 103 chr13 29758619 29759131 -90525181 - MT2A LTR ERVL -3 530 4 3 812 2629 271 104 51 chr13 29759131 29759591 -90524721 - Lx6 LINE L1 -662 5218 4733 3 812 511 316 127 42 chr13 29759592 29760087 -90524225 + Lx7 LINE L1 6923 7470 -3 3 812 28079 82 105 7 chr13 29763117 29767854 -90516458 + L1Md_F2 LINE L1 422 5585 -298 3 812 8124 75 1 1 chr13 29767855 29768851 -90515461 + L1Md_F2 LINE L1 5587 6582 0 3 812 1147 101 0 7 chr13 29768866 29769015 -90515297 + B1_Mus1 SINE Alu 1 148 0 3 812 360 0 0 0 chr13 29769408 29769448 -90514864 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 812 303 305 37 52 chr13 29769599 29769734 -90514578 - B1F SINE Alu -16 133 1 3 812 568 286 32 73 chr13 29770238 29770457 -90513855 - B3 SINE B2 -6 210 1 3 812 29 0 0 0 chr13 29770693 29770722 -90513590 + AT_rich Low_complexity Low_complexity 1 29 0 3 812 207 0 0 0 chr13 29770812 29770835 -90513477 + (TAGA)n Simple_repeat Simple_repeat 3 25 0 3 812 312 380 9 9 chr13 29772043 29772157 -90512155 + LTR82A LTR ERVL 134 247 -625 3 812 248 247 126 21 chr13 29772688 29772783 -90511529 - Charlie10 DNA MER1_type -2 2820 2716 3 812 390 299 8 8 chr13 29773153 29773271 -90511041 + GA-rich Low_complexity Low_complexity 3 120 0 3 812 1462 258 38 45 chr13 29773837 29774259 -90510053 - MTD LTR MaLR 0 419 1 3 812 290 278 133 0 chr13 29774353 29774443 -90509869 - PB1D7 SINE Alu -9 111 10 3 812 475 275 130 0 chr13 29774487 29774618 -90509694 - B1_Mur1 SINE Alu -1 148 1 3 812 233 169 16 63 chr13 29775810 29775873 -90508439 - RMER15 LTR ERVL -94 481 422 3 812 23 0 0 0 chr13 29776344 29776367 -90507945 + AT_rich Low_complexity Low_complexity 1 23 0 3 812 253 196 0 0 chr13 29776494 29776540 -90507772 - ID SINE ID -178 46 1 3 812 344 286 17 26 chr13 29776555 29776670 -90507642 - PB1D7 SINE Alu -5 115 2 3 812 3490 23 33 0 chr13 29776946 29777344 -90506968 + IAPLTR2a LTR ERVK 1 411 0 3 812 435 306 174 42 chr13 29777427 29777761 -90506551 + MLT1D LTR MaLR 93 470 -35 3 812 1728 272 49 28 chr13 29778338 29778915 -90505397 + Lx8 LINE L1 6161 6774 -699 3 812 507 339 101 21 chr13 29778934 29779260 -90505052 + Lx8 LINE L1 7033 7384 -89 3 812 576 346 33 37 chr13 29780312 29780582 -90503730 + B4A SINE B4 1 269 -23 3 812 270 81 0 0 chr13 29780595 29780632 -90503680 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 812 222 37 0 0 chr13 29782672 29782699 -90501613 + (A)n Simple_repeat Simple_repeat 1 27 0 3 812 1215 42 7 0 chr13 29782985 29783129 -90501183 + B1_Mus2 SINE Alu 2 146 -1 3 812 211 208 0 0 chr13 29783130 29783183 -90501129 + A-rich Low_complexity Low_complexity 1 53 0 3 812 273 75 0 0 chr13 29783735 29783775 -90500537 + (A)n Simple_repeat Simple_repeat 1 40 0 3 812 423 0 0 0 chr13 29784088 29784135 -90500177 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 812 23 33 0 0 chr13 29784540 29784570 -90499742 + AT_rich Low_complexity Low_complexity 1 30 0 3 812 439 328 36 1 chr13 29784877 29785114 -90499198 - L1M4b LINE L1 -896 6110 5865 3 812 367 276 69 28 chr13 29785303 29785506 -90498806 - L1M4b LINE L1 -4548 2554 2288 3 812 284 297 121 70 chr13 29785822 29786027 -90498285 - MLT2B5 LTR ERVL -4 550 338 3 812 351 304 33 13 chr13 29786389 29786539 -90497773 - MLT2B5 LTR ERVL -474 243 91 3 812 725 164 13 18 chr13 29787106 29787317 -90496995 + CT-rich Low_complexity Low_complexity 1 210 0 3 812 243 88 0 0 chr13 29789152 29789186 -90495126 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 812 313 274 19 47 chr13 29789314 29789421 -90494891 + PB1D10 SINE Alu 6 109 -8 3 812 465 313 24 40 chr13 29791103 29791296 -90493016 + B3A SINE B2 28 211 -5 3 812 2710 282 145 9 chr13 29791382 29792371 -90491941 + Lx8 LINE L1 6351 7473 0 3 812 22 0 0 0 chr13 29792400 29792422 -90491890 + AT_rich Low_complexity Low_complexity 1 22 0 3 812 248 163 0 181 chr13 29793103 29793208 -90491104 - Lx4A LINE L1 0 7058 6973 3 812 825 261 12 45 chr13 29793241 29793486 -90490826 + B4A SINE B4 6 242 -50 3 812 213 39 0 0 chr13 29794227 29794253 -90490059 + (TAA)n Simple_repeat Simple_repeat 3 28 0 3 812 189 294 44 0 chr13 29794429 29794497 -90489815 + MIRb SINE MIR 8 78 -190 3 812 269 130 11 85 chr13 29794497 29794673 -90489639 + (CAGTG)n Simple_repeat Simple_repeat 3 165 0 3 812 225 174 75 11 chr13 29794680 29794773 -90489539 + (CAG)n Simple_repeat Simple_repeat 3 101 0 3 812 278 130 11 85 chr13 29794773 29794950 -90489362 + (CAGTG)n Simple_repeat Simple_repeat 3 166 0 3 812 499 269 95 53 chr13 29795605 29795848 -90488464 - B4 SINE B4 -22 270 18 3 812 183 80 0 0 chr13 29796483 29796508 -90487804 + (TCTCCC)n Simple_repeat Simple_repeat 1 25 0 3 812 437 247 11 0 chr13 29796613 29796706 -90487606 + RSINE1 SINE B4 12 105 -60 3 812 9520 22 0 0 chr13 29796750 29797829 -90486483 + L1_Mm LINE L1 4508 5586 -297 3 812 9194 4 0 0 chr13 29797829 29798825 -90485487 + L1Md_T LINE L1 5587 6582 0 3 812 276 30 0 0 chr13 29798830 29798863 -90485449 + (A)n Simple_repeat Simple_repeat 1 33 0 3 812 327 293 70 45 chr13 29800065 29800222 -90484090 - L1MC2 LINE L1 -289 6055 5895 3 812 1184 34 7 7 chr13 29800237 29800384 -90483928 + B1_Mm SINE Alu 1 147 0 3 812 25 0 0 0 chr13 29800494 29800519 -90483793 + AT_rich Low_complexity Low_complexity 1 25 0 4 812 381 22 0 0 chr13 29800559 29800605 -90483707 + (CATA)n Simple_repeat Simple_repeat 2 47 0 4 812 1430 78 16 10 chr13 29800706 29800900 -90483412 + B2_Mm2 SINE B2 1 195 0 4 812 30 27 0 0 chr13 29801108 29801145 -90483167 + AT_rich Low_complexity Low_complexity 1 37 0 4 812 205 161 54 0 chr13 29801154 29801210 -90483102 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 4 812 435 19 0 0 chr13 29802108 29802160 -90482152 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 812 306 0 0 0 chr13 29802160 29802193 -90482119 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 812 506 234 65 0 chr13 29802294 29802418 -90481894 - B1_Mur1 SINE Alu -17 132 1 4 812 4222 177 83 16 chr13 29803146 29803985 -90480327 + Lx5 LINE L1 6137 7032 -18 4 812 222 37 0 0 chr13 29803985 29804012 -90480300 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 4 812 281 229 11 46 chr13 29804203 29804290 -90480022 + GA-rich Low_complexity Low_complexity 1 84 0 4 812 423 0 0 0 chr13 29805873 29805920 -90478392 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 812 504 117 0 0 chr13 29806013 29806090 -90478222 + (TGG)n Simple_repeat Simple_repeat 1 77 0 4 812 350 227 182 7 chr13 29806097 29806266 -90478046 + L1M5 LINE L1 5568 5767 -412 4 812 241 281 37 46 chr13 29806475 29806583 -90477729 + L1MB8 LINE L1 6067 6173 -5 4 812 336 264 0 0 chr13 29807860 29807932 -90476380 - RSINE1 SINE B4 -91 74 3 4 812 728 183 30 82 chr13 29808057 29808289 -90476023 - RCHARR1 DNA MER1_type 0 974 755 4 812 1244 266 43 97 chr13 29808297 29808784 -90475528 - RCHARR1 DNA MER1_type -513 461 1 4 812 459 0 0 0 chr13 29809394 29809445 -90474867 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 812 378 0 0 0 chr13 29810835 29810877 -90473435 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 812 248 206 68 0 chr13 29811314 29811387 -90472925 - Lx9 LINE L1 -1 7643 7566 4 812 948 212 43 14 chr13 29811811 29812021 -90472291 + B3 SINE B2 1 216 0 4 812 28 48 0 0 chr13 29812842 29812884 -90471428 + AT_rich Low_complexity Low_complexity 1 42 0 4 812 1229 92 51 61 chr13 29813550 29813747 -90470565 + B2_Mm2 SINE B2 1 195 0 4 812 3585 193 52 98 chr13 29813861 29814752 -90469560 + RMER1A Other Other 82 913 -117 4 812 342 45 0 0 chr13 29814752 29814796 -90469516 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 812 3585 193 52 98 chr13 29814796 29814898 -90469414 + RMER1A Other Other 914 1029 -1 4 812 284 200 16 32 chr13 29815815 29815877 -90468435 + RSINE1 SINE B4 27 87 -78 4 812 310 212 228 42 chr13 29817096 29817263 -90467049 + Lx8 LINE L1 7276 7473 0 4 812 567 43 0 0 chr13 29817280 29817350 -90466962 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 812 211 298 0 0 chr13 29817350 29817397 -90466915 + ID4_ SINE ID 8 54 -29 4 812 427 214 31 0 chr13 29817543 29817641 -90466671 + ORR1D1 LTR MaLR 1 101 -273 4 812 1331 178 99 67 chr13 29817647 29817991 -90466321 + RMER1B Other Other 703 1057 -9 4 812 679 255 167 18 chr13 29818008 29818275 -90466037 + ORR1D1 LTR MaLR 73 373 -1 4 812 384 71 0 0 chr13 29820313 29820369 -90463943 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 812 350 57 0 19 chr13 29820710 29820764 -90463548 + (GA)n Simple_repeat Simple_repeat 1 53 0 4 812 728 296 134 33 chr13 29820899 29821228 -90463084 - MTEa LTR MaLR -3 376 15 4 812 291 319 184 16 chr13 29821280 29821465 -90462847 - ID_B1 SINE B4 -1 223 8 4 812 461 277 0 0 chr13 29821905 29822017 -90462295 + B1F SINE Alu 37 148 -1 4 812 8209 84 11 3 chr13 29822507 29823604 -90460708 + Lx LINE L1 5520 6654 0 4 812 861 164 14 0 chr13 29824178 29824318 -90459994 + B1_Mus2 SINE Alu 1 142 -5 4 812 354 45 0 0 chr13 29824318 29824362 -90459950 + (GGA)n Simple_repeat Simple_repeat 3 46 0 4 812 1358 195 84 113 chr13 29824756 29824866 -90459446 + MTD LTR MaLR 1 76 -343 4 812 276 77 0 0 chr13 29824866 29824905 -90459407 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 812 1358 191 73 94 chr13 29824905 29825224 -90459088 + MTD LTR MaLR 77 405 -14 4 812 434 306 14 36 chr13 29825690 29825829 -90458483 + RSINE1 SINE B4 2 137 -28 4 812 664 179 37 8 chr13 29825938 29826086 -90458226 + B1_Mus2 SINE Alu 1 150 0 4 812 196 368 51 14 chr13 29826598 29826736 -90457576 - MIRb SINE MIR -122 146 4 4 812 32 26 0 0 chr13 29828156 29828195 -90456117 + AT_rich Low_complexity Low_complexity 1 39 0 4 812 198 0 0 0 chr13 29828325 29828347 -90455965 + (A)n Simple_repeat Simple_repeat 1 22 0 4 812 438 69 0 0 chr13 29829080 29829138 -90455174 + (CTGGGG)n Simple_repeat Simple_repeat 5 62 0 4 812 261 0 0 0 chr13 29830668 29830697 -90453615 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 812 180 333 0 0 chr13 29832806 29832857 -90451455 + L2b LINE L2 3109 3159 -216 4 812 315 0 0 0 chr13 29832981 29833016 -90451296 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 812 6813 56 14 1 chr13 29833851 29834691 -90449621 + L1_Mus1 LINE L1 5717 6567 0 4 812 645 230 24 0 chr13 29835489 29835615 -90448697 + RSINE1 SINE B4 3 131 -34 4 812 956 222 116 24 chr13 29835833 29836038 -90448274 - ORR1D2 LTR MaLR 0 370 140 4 812 1292 187 4 4 chr13 29836038 29836264 -90448048 + URR1A DNA MER1_type 1 226 0 4 812 956 222 116 24 chr13 29836264 29836395 -90447917 - ORR1D2 LTR MaLR -231 139 3 4 812 729 225 31 21 chr13 29836560 29836751 -90447561 + B3 SINE B2 24 216 0 4 812 489 268 101 25 chr13 29836889 29837088 -90447224 - MER58A DNA MER1_type -9 215 2 4 812 599 272 141 15 chr13 29840044 29840242 -90444070 + B4 SINE B4 1 223 -69 4 812 522 207 61 30 chr13 29840264 29840460 -90443852 + B2_Mm2 SINE B2 1 206 -10 4 812 24 0 0 0 chr13 29840810 29840834 -90443478 + AT_rich Low_complexity Low_complexity 1 24 0 4 812 237 284 43 50 chr13 29841266 29841407 -90442905 - MER47B DNA MER2_type -141 277 138 4 812 261 0 0 0 chr13 29842040 29842069 -90442243 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 812 225 0 0 0 chr13 29842190 29842215 -90442097 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 812 225 0 0 0 chr13 29842511 29842536 -90441776 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 812 305 330 124 28 chr13 29842932 29843150 -90441162 + MT2A LTR ERVL 218 456 -77 4 812 228 100 0 0 chr13 29843675 29843715 -90440597 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 4 812 278 262 100 27 chr13 29843717 29843827 -90440485 - B1_Mur1 SINE Alu -30 119 2 4 812 1605 177 104 22 chr13 29844322 29844478 -90439834 + MT2A LTR ERVL 10 166 -367 4 812 684 0 0 0 chr13 29844478 29844554 -90439758 + (GGAA)n Simple_repeat Simple_repeat 2 77 0 4 812 1605 177 104 22 chr13 29844554 29844801 -90439511 + MT2A LTR ERVL 167 445 -88 4 812 260 154 19 0 chr13 29844827 29844879 -90439433 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 4 812 265 105 0 38 chr13 29844879 29844935 -90439377 + MT2A LTR ERVL 486 577 -7 4 812 2792 191 168 31 chr13 29846240 29846994 -90437318 - RMER1B Other Other 0 1066 176 4 812 2997 275 161 22 chr13 29847710 29849326 -90434986 + L1MCa LINE L1 27 1867 -4641 4 812 568 238 56 0 chr13 29849593 29849736 -90434576 - B3A SINE B2 -47 151 1 4 812 410 0 20 0 chr13 29849965 29850015 -90434297 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 812 768 254 10 30 chr13 29850133 29850332 -90433980 - ID_B1 SINE B4 -29 195 1 4 812 809 244 66 4 chr13 29850382 29850625 -90433687 + L1MCa LINE L1 4588 4845 -1476 4 812 367 355 29 22 chr13 29850627 29850765 -90433547 + RSINE1 SINE B4 5 143 -22 4 812 251 267 109 0 chr13 29850878 29850979 -90433333 + L1MCa LINE L1 4943 5054 -1267 4 812 399 273 199 7 chr13 29851016 29851167 -90433145 + B3A SINE B2 4 183 -15 4 812 306 290 95 16 chr13 29851220 29851346 -90432966 + B1F SINE Alu 1 136 -13 4 812 290 276 93 36 chr13 29851557 29851696 -90432616 + L1MCa LINE L1 5801 5947 -572 4 812 486 0 0 0 chr13 29851964 29852018 -90432294 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 812 240 246 0 0 chr13 29854194 29854251 -90430061 + L1MC4 LINE L1 1684 1740 -4475 4 812 721 338 115 50 chr13 29854836 29855636 -90428676 + MTE-int LTR MaLR 62 913 -667 4 812 353 300 8 30 chr13 29856111 29856245 -90428067 + MLT1L LTR MaLR 421 551 -59 4 812 968 223 56 5 chr13 29856421 29856619 -90427693 - B3 SINE B2 -8 208 1 4 812 265 322 25 8 chr13 29856845 29856967 -90427345 + Helitron3Na_Mam RC Helitron 194 317 -169 4 812 210 297 0 15 chr13 29857938 29858003 -90426309 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 812 180 0 0 0 chr13 29861401 29861421 -90422891 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 812 2318 102 6 12 chr13 29863108 29863437 -90420875 + L1_Mus3 LINE L1 6305 6631 -7 4 812 758 294 21 17 chr13 29863537 29863776 -90420536 + B4A SINE B4 48 287 -5 4 812 305 286 11 0 chr13 29864937 29865028 -90419284 + B4A SINE B4 2 93 -199 4 812 378 0 0 0 chr13 29866253 29866295 -90418017 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 812 23 33 0 0 chr13 29867095 29867125 -90417187 + AT_rich Low_complexity Low_complexity 1 30 0 4 812 1208 41 0 20 chr13 29867179 29867329 -90416983 + B1_Mus1 SINE Alu 2 148 0 4 812 208 143 0 0 chr13 29867331 29867366 -90416946 + (A)n Simple_repeat Simple_repeat 1 35 0 4 812 306 0 0 0 chr13 29867800 29867834 -90416478 + (GA)n Simple_repeat Simple_repeat 1 34 0 4 812 21 36 0 0 chr13 29868040 29868068 -90416244 + AT_rich Low_complexity Low_complexity 1 28 0 4 812 279 146 0 0 chr13 29868703 29868751 -90415561 - U5 snRNA snRNA -66 50 3 4 812 706 243 7 0 chr13 29868796 29868944 -90415368 + RSINE1 SINE B4 15 163 -2 4 812 188 154 19 0 chr13 29868946 29868998 -90415314 + T-rich Low_complexity Low_complexity 3 55 0 4 812 1221 85 0 0 chr13 29869456 29869632 -90414680 + (TG)n Simple_repeat Simple_repeat 1 176 0 4 812 390 308 73 20 chr13 29870756 29871027 -90413285 + MTEa LTR MaLR 45 355 -24 4 812 441 0 0 0 chr13 29871063 29871112 -90413200 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 812 378 0 0 0 chr13 29871541 29871583 -90412729 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 812 510 264 46 8 chr13 29871596 29871726 -90412586 - RSINE1 SINE B4 -28 137 3 5 812 441 349 45 60 chr13 29871856 29872057 -90412255 - B3A SINE B2 0 198 1 5 812 451 271 13 91 chr13 29872130 29872284 -90412028 - RSINE1 SINE B4 -21 144 3 5 812 242 233 67 0 chr13 29872428 29872488 -90411824 + ID4_ SINE ID 1 64 -19 5 812 301 282 59 8 chr13 29873195 29873313 -90410999 - MIRb SINE MIR -112 156 33 5 812 693 307 44 11 chr13 29875348 29875621 -90408691 + B4 SINE B4 2 283 -9 5 812 387 0 0 0 chr13 29875626 29875669 -90408643 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 812 244 217 0 48 chr13 29875670 29875733 -90408579 + GA-rich Low_complexity Low_complexity 2 61 0 5 812 416 214 176 17 chr13 29875987 29876106 -90408206 + B1F SINE Alu 12 149 0 5 812 563 242 114 6 chr13 29876374 29876540 -90407772 + B3A SINE B2 1 184 -14 5 812 1272 306 68 33 chr13 29876555 29877311 -90407001 + L1MB8 LINE L1 5288 6064 -120 5 812 623 225 29 14 chr13 29877311 29877451 -90406861 + B1F SINE Alu 1 142 -7 5 812 1230 317 61 36 chr13 29877451 29877467 -90406845 + L1MB8 LINE L1 6065 6079 -105 5 812 23 0 0 0 chr13 29879694 29879717 -90404595 + AT_rich Low_complexity Low_complexity 1 23 0 5 812 265 247 48 41 chr13 29880293 29880415 -90403897 + B3A SINE B2 2 188 -28 5 812 992 135 0 0 chr13 29880430 29880571 -90403741 + B1_Mus2 SINE Alu 1 141 -6 5 812 273 151 0 0 chr13 29880573 29880626 -90403686 + G-rich Low_complexity Low_complexity 5 57 0 5 812 257 158 25 38 chr13 29880612 29880691 -90403621 + GA-rich Low_complexity Low_complexity 2 79 0 5 812 25 31 0 0 chr13 29880694 29880726 -90403586 + AT_rich Low_complexity Low_complexity 1 32 0 5 812 432 216 109 92 chr13 29880729 29880913 -90403399 - B2_Mm2 SINE B2 -3 192 6 5 812 929 194 128 61 chr13 29881058 29881370 -90402942 + MTEb LTR MaLR 3 335 -44 5 812 180 0 0 0 chr13 29882257 29882277 -90402035 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 812 1164 86 0 0 chr13 29882277 29882439 -90401873 - B2_Mm2 SINE B2 -33 162 1 5 812 1032 267 91 12 chr13 29883955 29884296 -90400016 + ORR1D2 LTR MaLR 1 368 -2 5 813 700 216 7 0 chr13 29884704 29884843 -90399469 - B1_Mur2 SINE Alu -7 142 3 5 813 579 96 0 0 chr13 29885569 29885652 -90398660 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 5 813 300 297 119 18 chr13 29886010 29886178 -90398134 + L1MC3 LINE L1 6631 6815 -970 5 813 987 199 15 0 chr13 29886667 29886873 -90397439 + B3 SINE B2 8 216 0 5 813 1190 234 71 52 chr13 29886992 29887415 -90396897 + RMER4B LTR ERVK 1 431 -154 5 813 228 264 61 77 chr13 29887809 29887849 -90396463 - L1MA8 LINE L1 -35 6256 6217 5 813 555 118 0 0 chr13 29887849 29887934 -90396378 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 813 228 264 61 77 chr13 29887934 29888074 -90396238 - L1MA8 LINE L1 -75 6216 6079 5 813 1598 282 77 24 chr13 29888048 29888687 -90395625 + Lx8 LINE L1 6800 7472 -1 5 813 236 310 0 11 chr13 29888823 29888911 -90395401 + Charlie13a DNA Charlie 844 930 -584 5 813 434 312 85 43 chr13 29889623 29889787 -90394525 + B4 SINE B4 2 172 -120 5 813 584 335 36 35 chr13 29890514 29890802 -90393510 + L1MC LINE L1 5380 5678 -2204 5 813 279 0 0 0 chr13 29890802 29890833 -90393479 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 813 584 333 34 37 chr13 29890833 29890900 -90393412 + L1MC LINE L1 5679 5736 -2146 5 813 1138 123 58 6 chr13 29890919 29891091 -90393221 + B2_Mm2 SINE B2 1 181 -14 5 813 634 284 123 0 chr13 29891823 29891985 -90392327 + B3A SINE B2 1 182 -16 5 813 351 372 40 13 chr13 29892295 29892482 -90391830 + B4A SINE B4 86 280 -12 5 813 571 262 56 14 chr13 29892742 29892885 -90391427 - B3A SINE B2 -49 149 1 5 813 228 242 48 0 chr13 29892946 29893008 -90391304 + L1M6 LINE L1 1757 1821 -4675 5 813 893 168 203 16 chr13 29893437 29893619 -90390693 - B3 SINE B2 0 216 1 5 813 519 230 167 0 chr13 29893661 29893787 -90390525 - B1F1 SINE Alu 0 149 3 5 813 222 208 0 0 chr13 29893871 29893919 -90390393 + (CTA)n Simple_repeat Simple_repeat 3 50 0 5 813 595 239 194 0 chr13 29893950 29894105 -90390207 - B3 SINE B2 -30 186 2 5 813 228 263 45 100 chr13 29894183 29894293 -90390019 - L1MA4 LINE L1 -336 5964 5861 5 813 1393 87 16 0 chr13 29895565 29895748 -90388564 + B2_Mm1a SINE B2 4 189 -4 5 813 222 273 79 47 chr13 29896134 29896261 -90388051 + MIRb SINE MIR 102 232 -36 5 813 237 313 67 82 chr13 29897108 29897303 -90387009 + B4 SINE B4 101 292 0 5 813 348 276 218 17 chr13 29897322 29897620 -90386692 + L1MEc LINE L1 529 886 -5514 5 813 440 297 70 53 chr13 29897830 29898129 -90386183 - ERVL-E-int LTR ERVL -592 5075 4772 5 813 548 261 88 64 chr13 29898192 29898520 -90385792 - ORR1E LTR MaLR -21 338 3 5 813 1140 336 14 19 chr13 29898702 29899115 -90385197 - ERVL-E-int LTR ERVL -1249 4418 4008 5 813 475 329 87 13 chr13 29899187 29899612 -90384700 - ERVL-E-int LTR ERVL -1939 3818 3463 5 813 371 203 0 0 chr13 29899614 29899683 -90384629 + Lx3B LINE L1 6900 6968 -5 5 813 29 28 0 0 chr13 29899690 29899726 -90384586 + AT_rich Low_complexity Low_complexity 1 36 0 5 813 203 350 47 40 chr13 29899871 29900020 -90384292 + MIRb SINE MIR 98 247 -21 5 813 182 371 97 0 chr13 29900198 29900322 -90383990 + MIR3 SINE MIR 44 179 -29 5 813 865 210 122 11 chr13 29900567 29900755 -90383557 + B3 SINE B2 3 211 -5 5 813 540 301 6 84 chr13 29900771 29900938 -90383374 + RSINE1 SINE B4 12 165 0 5 813 732 227 8 0 chr13 29901029 29901161 -90383151 - B1_Mur1 SINE Alu -15 134 2 5 813 46 74 0 0 chr13 29902090 29902185 -90382127 + AT_rich Low_complexity Low_complexity 1 95 0 5 813 780 270 22 17 chr13 29905276 29905441 -90378871 + B3A SINE B2 1 168 -30 5 813 429 20 0 0 chr13 29905441 29905491 -90378821 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 813 780 270 22 17 chr13 29905491 29905506 -90378806 + B3A SINE B2 169 182 -16 5 813 206 250 14 0 chr13 29905506 29905578 -90378734 + (TA)n Simple_repeat Simple_repeat 2 74 0 5 813 186 43 0 0 chr13 29905798 29905821 -90378491 + (A)n Simple_repeat Simple_repeat 1 23 0 5 813 488 241 28 63 chr13 29906350 29906492 -90377820 - B3A SINE B2 0 198 62 5 813 246 186 0 0 chr13 29906805 29906848 -90377464 - B3A SINE B2 -155 43 1 5 813 1047 232 34 0 chr13 29907129 29907336 -90376976 + B3 SINE B2 2 215 -1 5 813 2196 156 150 3 chr13 29907748 29908115 -90376197 + MTC LTR MaLR 1 421 0 5 813 720 293 96 41 chr13 29908400 29908670 -90375642 - B4A SINE B4 -6 286 2 5 813 359 331 121 7 chr13 29908907 29909056 -90375256 - L2a LINE L2 -266 3160 2995 5 813 1428 216 104 32 chr13 29909063 29909408 -90374904 + ORR1D2 LTR MaLR 1 370 0 5 813 293 209 60 0 chr13 29909495 29909562 -90374750 - MER3 DNA MER1_type -31 178 108 5 813 295 309 15 0 chr13 29909653 29909721 -90374591 - ID4_ SINE ID -12 71 3 5 813 239 334 181 13 chr13 29909741 29910044 -90374268 - L2a LINE L2 -625 2794 2441 5 813 228 277 97 19 chr13 29910291 29910394 -90373918 - L2a LINE L2 -1319 2100 1990 5 813 309 273 210 29 chr13 29911096 29911334 -90372978 + B4A SINE B4 3 283 -9 5 813 212 196 0 38 chr13 29911337 29911390 -90372922 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 813 606 242 60 0 chr13 29911937 29912086 -90372226 + RSINE1 SINE B4 4 161 -4 5 813 725 125 8 0 chr13 29912799 29912919 -90371393 + (GAAA)n Simple_repeat Simple_repeat 3 123 0 5 813 1355 191 52 7 chr13 29912945 29913214 -90371098 + Lx5 LINE L1 6769 7049 -1 5 813 699 194 8 0 chr13 29914157 29914286 -90370026 + B3A SINE B2 6 135 -63 5 813 331 282 59 30 chr13 29914591 29914726 -90369586 + MTD LTR MaLR 5 143 -276 5 813 231 264 11 54 chr13 29914922 29915014 -90369298 + PB1 SINE Alu 32 119 -8 5 813 732 227 18 55 chr13 29915051 29915214 -90369098 + RSINE1 SINE B4 9 165 0 5 813 208 261 0 0 chr13 29915916 29915962 -90368350 - L2c LINE L2 -99 3288 3243 5 813 453 323 0 0 chr13 29916457 29916584 -90367728 + B1F SINE Alu 16 142 -7 5 813 330 270 45 9 chr13 29916989 29917101 -90367211 + PB1D10 SINE Alu 1 116 -1 5 813 280 286 0 0 chr13 29917515 29917585 -90366727 + ID4_ SINE ID 9 78 -5 5 813 297 135 0 0 chr13 29917966 29918018 -90366294 + (CCCCCT)n Simple_repeat Simple_repeat 1 52 0 5 813 201 74 0 0 chr13 29918496 29918523 -90365789 + (T)n Simple_repeat Simple_repeat 1 27 0 5 813 21 36 0 0 chr13 29920441 29920469 -90363843 + AT_rich Low_complexity Low_complexity 1 28 0 5 813 297 226 0 0 chr13 29920676 29920760 -90363552 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 813 331 109 0 0 chr13 29920795 29920841 -90363471 + U2 snRNA snRNA 1 46 -142 5 813 709 216 69 87 chr13 29926342 29926560 -90357752 + B3 SINE B2 3 216 0 5 813 198 0 0 0 chr13 29927191 29927213 -90357099 + (A)n Simple_repeat Simple_repeat 1 22 0 5 813 1714 31 11 0 chr13 29927393 29927584 -90356728 - B2_Mm1a SINE B2 0 193 1 5 813 26 30 0 0 chr13 29927876 29927909 -90356403 + AT_rich Low_complexity Low_complexity 1 33 0 5 813 402 285 2 0 chr13 29929585 29929675 -90354637 + PB1D7 SINE Alu 15 106 -14 5 813 370 138 12 24 chr13 29929678 29929760 -90354552 + GA-rich Low_complexity Low_complexity 5 85 0 5 813 24 0 0 0 chr13 29930843 29930867 -90353445 + AT_rich Low_complexity Low_complexity 1 24 0 5 813 27 62 0 0 chr13 29931793 29931841 -90352471 + AT_rich Low_complexity Low_complexity 1 48 0 5 813 390 267 100 64 chr13 29932245 29932385 -90351927 - B4 SINE B4 -80 212 68 5 813 21 0 0 0 chr13 29932674 29932695 -90351617 + AT_rich Low_complexity Low_complexity 1 21 0 5 813 1505 73 11 0 chr13 29933088 29933279 -90351033 + B2_Mm1t SINE B2 1 193 0 6 813 21 0 0 0 chr13 29933315 29933336 -90350976 + AT_rich Low_complexity Low_complexity 1 21 0 6 813 5628 205 64 39 chr13 29933371 29934700 -90349612 + Lx7 LINE L1 6335 7696 0 6 813 239 222 0 43 chr13 29934818 29934865 -90349447 - PB1D9 SINE Alu -75 45 1 6 813 367 179 90 0 chr13 29936005 29936072 -90348240 + PB1D7 SINE Alu 27 99 -21 6 813 280 250 56 0 chr13 29936335 29936407 -90347905 - PB1D10 SINE Alu -8 109 34 6 813 180 0 0 0 chr13 29936588 29936608 -90347704 + (CCTG)n Simple_repeat Simple_repeat 2 21 0 6 813 22 56 0 0 chr13 29936969 29937005 -90347307 + AT_rich Low_complexity Low_complexity 1 36 0 6 813 558 200 105 23 chr13 29937298 29937431 -90346881 + B1F2 SINE Alu 3 146 -3 6 813 426 279 78 0 chr13 29937527 29937656 -90346656 + B3 SINE B2 1 139 -77 6 813 425 197 186 54 chr13 29937721 29937850 -90346462 + RSINE1 SINE B4 4 149 -16 6 813 1538 165 14 21 chr13 29938423 29938702 -90345610 + MTC LTR MaLR 144 420 -1 6 813 1864 184 44 3 chr13 29938820 29939158 -90345154 + Lx7 LINE L1 6245 6596 -1100 6 813 981 163 158 0 chr13 29939167 29939357 -90344955 + URR1A DNA MER1_type 7 226 0 6 813 633 193 204 6 chr13 29939357 29939519 -90344793 + Lx7 LINE L1 6584 6777 -919 6 813 857 133 108 12 chr13 29939541 29939708 -90344604 + Lx7 LINE L1 7514 7696 0 6 813 505 289 72 0 chr13 29939748 29939900 -90344412 + RSINE1 SINE B4 3 165 0 6 813 23 33 0 0 chr13 29939933 29939963 -90344349 + AT_rich Low_complexity Low_complexity 1 30 0 6 813 240 293 0 0 chr13 29939970 29940028 -90344284 + B4A SINE B4 89 146 -146 6 813 348 198 113 62 chr13 29939977 29940074 -90344238 + PB1D10 SINE Alu 11 112 -5 6 813 775 281 18 75 chr13 29940197 29940478 -90343834 + B4A SINE B4 2 266 -26 6 813 459 0 0 0 chr13 29940481 29940532 -90343780 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 813 1285 27 7 0 chr13 29940599 29940738 -90343574 + B1_Mus1 SINE Alu 1 140 -8 6 813 242 0 61 0 chr13 29940738 29940771 -90343541 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 813 604 27 0 0 chr13 29941038 29941111 -90343201 + L1_Mus2 LINE L1 6492 6564 -2 6 813 21 0 0 0 chr13 29941111 29941132 -90343180 + AT_rich Low_complexity Low_complexity 1 21 0 6 813 216 0 0 0 chr13 29941659 29941683 -90342629 + (T)n Simple_repeat Simple_repeat 1 24 0 6 813 1220 43 0 7 chr13 29942340 29942481 -90341831 + B1_Mm SINE Alu 2 141 -6 6 813 216 86 0 0 chr13 29942483 29942518 -90341794 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 813 977 213 30 5 chr13 29942530 29942733 -90341579 + B3 SINE B2 1 208 -8 6 813 324 0 0 0 chr13 29942749 29942785 -90341527 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 813 892 203 114 48 chr13 29942831 29943154 -90341158 + L1_Rod LINE L1 3643 3951 -2192 6 813 1182 237 0 0 chr13 29943154 29943365 -90340947 + B3 SINE B2 1 211 -5 6 813 1476 140 13 18 chr13 29943502 29943728 -90340584 + URR1B DNA MER1_type 1 225 0 6 813 567 322 66 4 chr13 29944930 29945158 -90339154 - MTEb LTR MaLR -69 310 69 6 813 679 272 77 11 chr13 29945291 29945551 -90338761 + L1M4 LINE L1 4882 5158 -988 6 813 484 336 0 0 chr13 29945558 29945701 -90338611 + ID_B1 SINE B4 82 224 0 6 813 524 259 92 13 chr13 29945705 29946018 -90338294 + L1M4 LINE L1 5151 5484 -700 6 813 307 226 340 0 chr13 29946074 29946180 -90338132 + B1_Mur1 SINE Alu 2 143 -6 6 813 30 0 0 0 chr13 29946180 29946210 -90338102 + AT_rich Low_complexity Low_complexity 1 30 0 6 813 186 43 0 0 chr13 29946210 29946233 -90338079 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 813 697 205 47 36 chr13 29946290 29946482 -90337830 + B2_Mm2 SINE B2 2 195 0 6 813 225 0 0 0 chr13 29946891 29946916 -90337396 + (A)n Simple_repeat Simple_repeat 1 25 0 6 813 350 21 0 21 chr13 29947866 29947914 -90336398 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 6 813 536 281 14 0 chr13 29947915 29948054 -90336258 - B1_Mur2 SINE Alu -8 141 1 6 813 344 215 12 12 chr13 29948407 29948487 -90335825 - ID4_ SINE ID -3 80 1 6 813 186 43 0 0 chr13 29949027 29949050 -90335262 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 813 1161 75 0 13 chr13 29949055 29949204 -90335108 - B1_Mus1 SINE Alu 0 148 2 6 813 279 71 0 0 chr13 29949696 29949738 -90334574 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 6 813 1263 94 0 0 chr13 29949738 29949917 -90334395 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 6 813 669 25 0 0 chr13 29950388 29950467 -90333845 + (GA)n Simple_repeat Simple_repeat 2 80 0 6 813 243 297 0 98 chr13 29950489 29950506 -90333806 - ID_B1 SINE B4 0 224 114 6 813 471 170 28 57 chr13 29950506 29950612 -90333700 - B1F2 SINE Alu -14 135 33 6 813 448 220 11 0 chr13 29950616 29950707 -90333605 + B1_Mur1 SINE Alu 23 114 -35 6 813 399 89 0 0 chr13 29951027 29951083 -90333229 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 813 403 205 4 17 chr13 29951154 29951389 -90332923 + CT-rich Low_complexity Low_complexity 1 231 0 6 813 21 0 0 0 chr13 29951421 29951442 -90332870 + AT_rich Low_complexity Low_complexity 1 21 0 6 813 676 201 20 14 chr13 29951481 29951627 -90332685 - B1_Mur2 SINE Alu -2 147 1 6 813 1367 282 104 61 chr13 29951780 29951913 -90332399 - L1MC4a LINE L1 -310 7572 7473 6 813 372 291 8 25 chr13 29951913 29952033 -90332279 - PB1D9 SINE Alu -1 119 2 6 813 1367 282 104 61 chr13 29952033 29952685 -90331627 - L1MC4a LINE L1 -410 7472 6753 6 813 433 339 0 0 chr13 29952688 29952809 -90331503 + ID_B1 SINE B4 81 201 -23 6 813 876 108 0 0 chr13 29952825 29952955 -90331357 + (GGAA)n Simple_repeat Simple_repeat 1 130 0 6 813 603 280 66 20 chr13 29952973 29953170 -90331142 + B3 SINE B2 10 215 -1 6 813 417 306 215 10 chr13 29953270 29953897 -90330415 - L2 LINE L2 -975 2444 1689 6 813 29 60 0 0 chr13 29953898 29953948 -90330364 + AT_rich Low_complexity Low_complexity 1 50 0 6 813 425 223 53 0 chr13 29953959 29954053 -90330259 + RMER19B LTR ERVK 1 99 -803 6 813 1305 97 28 0 chr13 29954053 29954229 -90330083 + B2_Mm2 SINE B2 1 181 -14 6 813 810 0 0 0 chr13 29954236 29954326 -90329986 + (GGAAA)n Simple_repeat Simple_repeat 3 92 0 6 813 3174 181 112 68 chr13 29954326 29954675 -90329637 + RMER19B LTR ERVK 55 417 -485 6 813 1182 55 7 0 chr13 29954675 29954820 -90329492 + B1_Mus1 SINE Alu 2 147 -1 6 813 3174 178 117 61 chr13 29954820 29955290 -90329022 + RMER19B LTR ERVK 418 902 0 6 813 424 225 135 0 chr13 29955290 29955401 -90328911 + B1_Mur1 SINE Alu 14 139 -10 6 813 369 0 0 0 chr13 29955401 29955442 -90328870 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 6 813 674 270 38 43 chr13 29955473 29955682 -90328630 + ID_B1 SINE B4 5 212 -12 6 813 225 226 0 0 chr13 29955683 29955736 -90328576 + CT-rich Low_complexity Low_complexity 2 54 0 6 813 1168 48 0 33 chr13 29955737 29955889 -90328423 - B1_Mus2 SINE Alu 0 147 1 6 813 216 0 0 0 chr13 29956212 29956236 -90328076 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 813 414 254 157 0 chr13 29956708 29956842 -90327470 - RSINE1 SINE B4 -8 157 3 6 813 797 260 20 5 chr13 29956928 29957042 -90327270 - B3 SINE B2 -5 211 98 6 813 1259 79 84 6 chr13 29957042 29957221 -90327091 + B2_Mm2 SINE B2 2 194 -1 6 813 797 260 20 5 chr13 29957221 29957307 -90327005 - B3 SINE B2 -119 97 9 6 813 1296 119 0 5 chr13 29957513 29957707 -90326605 + B2_Mm2 SINE B2 1 193 -2 6 813 491 232 0 92 chr13 29957718 29957870 -90326442 + B3 SINE B2 78 215 -1 6 813 1401 65 27 11 chr13 29959049 29959237 -90325075 + B2_Mm2 SINE B2 3 193 -2 6 813 289 241 190 0 chr13 29959486 29959623 -90324689 - RSINE1 SINE B4 -1 164 2 6 813 243 0 0 0 chr13 29960213 29960240 -90324072 + (TTG)n Simple_repeat Simple_repeat 2 28 0 6 813 294 141 47 206 chr13 29960242 29960349 -90323963 - B1_Mur3 SINE Alu -12 137 48 6 813 450 144 0 0 chr13 29960267 29960353 -90323959 + B1_Mur4 SINE Alu 56 142 -8 6 813 191 312 10 30 chr13 29961039 29961138 -90323174 + MIRc SINE MIR 52 148 -120 6 813 1345 223 99 3 chr13 29961172 29961505 -90322807 + ORR1D2 LTR MaLR 6 370 0 6 813 1743 16 0 0 chr13 29961541 29961733 -90322579 - B2_Mm1a SINE B2 0 193 2 6 813 714 276 121 66 chr13 29963020 29963067 -90321245 + MTD LTR MaLR 18 66 -353 6 813 693 211 35 0 chr13 29963067 29963209 -90321103 + B1_Mur1 SINE Alu 3 149 0 6 813 714 276 121 66 chr13 29963209 29963541 -90320771 + MTD LTR MaLR 67 418 -1 6 813 712 292 139 38 chr13 29963584 29963669 -90320643 + MLT1F LTR MaLR 60 140 -408 6 813 1430 211 77 14 chr13 29963669 29964020 -90320292 - ORR1D1 LTR MaLR -1 373 1 6 813 712 292 139 38 chr13 29964020 29964307 -90320005 + MLT1F LTR MaLR 141 470 -78 6 813 1140 75 0 7 chr13 29964337 29964484 -90319828 - B1_Mus1 SINE Alu -2 146 1 6 813 611 234 73 0 chr13 29964697 29964834 -90319478 - B1_Mur2 SINE Alu -1 148 2 6 813 214 303 79 20 chr13 29964856 29964872 -90319440 - B4A SINE B4 -185 107 1 6 813 381 205 24 24 chr13 29964872 29964957 -90319355 - B3A SINE B2 -113 85 1 6 813 562 340 7 0 chr13 29964978 29965122 -90319190 - RSINE1 SINE B4 -6 159 15 6 813 567 66 0 0 chr13 29965644 29965720 -90318592 + (TC)n Simple_repeat Simple_repeat 1 76 0 6 813 219 170 0 0 chr13 29965731 29965778 -90318534 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 813 372 241 66 74 chr13 29965812 29965933 -90318379 - B1_Mm SINE Alu 0 120 1 6 813 788 272 5 10 chr13 29965943 29966147 -90318165 - B3 SINE B2 0 216 14 6 813 230 292 61 9 chr13 29966140 29966254 -90318058 - B1F SINE Alu -11 138 19 6 813 479 281 114 24 chr13 29966536 29966744 -90317568 - ID_B1 SINE B4 -1 223 1 6 813 660 243 7 39 chr13 29966781 29966935 -90317377 - B1_Mur1 SINE Alu 0 149 1 7 813 615 27 0 0 chr13 29966959 29967032 -90317280 + (TTTTC)n Simple_repeat Simple_repeat 3 75 0 7 813 3377 108 18 0 chr13 29967042 29967532 -90316780 - L1_Mus4 LINE L1 0 6636 6138 7 813 531 203 138 25 chr13 29967532 29967747 -90316565 - Lx7 LINE L1 -10 7686 7422 7 813 210 91 0 0 chr13 29967747 29967780 -90316532 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 813 233 217 146 42 chr13 29967780 29967831 -90316481 - Lx7 LINE L1 -275 7421 7369 7 813 2496 92 3 0 chr13 29967831 29968157 -90316155 - ORR1A2 LTR MaLR 0 327 1 7 813 1972 153 149 5 chr13 29968159 29968527 -90315785 + MTC LTR MaLR 1 421 0 7 813 592 310 40 40 chr13 29968541 29968813 -90315499 - MLT2D LTR ERVL -142 272 1 7 813 339 65 0 0 chr13 29970046 29970092 -90314220 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 813 925 239 48 36 chr13 29970092 29970456 -90313856 - MT2A LTR ERVL -61 540 6 7 813 494 238 255 17 chr13 29970580 29970832 -90313480 - ORR1D2 LTR MaLR 0 374 75 7 813 794 234 68 44 chr13 29970864 29971070 -90313242 + B3 SINE B2 1 211 -5 7 813 662 255 171 16 chr13 29971762 29971949 -90312363 + ID_B1 SINE B4 2 217 -7 7 813 195 114 0 0 chr13 29971973 29972008 -90312304 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 7 813 856 174 0 0 chr13 29972008 29972140 -90312172 - B1_Mur3 SINE Alu -17 132 1 7 813 517 182 0 0 chr13 29972345 29972433 -90311879 - B4A SINE B4 -202 90 3 7 813 2862 36 0 6 chr13 29972516 29972855 -90311457 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 813 19981 11 3 0 chr13 29972855 29975029 -90309283 - IAPEz-int LTR ERVK 0 6481 4302 7 813 27809 27 15 19 chr13 29975009 29978290 -90306022 - IAPEz-int LTR ERVK -3208 3273 8 7 813 2862 36 0 6 chr13 29978290 29978629 -90305683 - IAPLTR1a_Mm LTR ERVK 0 337 1 7 813 1040 96 7 20 chr13 29978849 29978998 -90305314 - B1_Mus1 SINE Alu -1 147 1 7 813 243 252 17 147 chr13 29979839 29979955 -90304357 + MT2B LTR ERVL 157 257 -344 7 813 713 133 8 8 chr13 29979851 29979990 -90304322 + B1_Mur4 SINE Alu 2 141 -9 7 813 189 0 0 0 chr13 29979994 29980015 -90304297 + (CAA)n Simple_repeat Simple_repeat 2 22 0 7 813 414 0 0 0 chr13 29980063 29980109 -90304203 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 813 2012 161 13 65 chr13 29980136 29980534 -90303778 - ORR1C1 LTR MaLR 0 378 2 7 813 414 0 0 0 chr13 29980675 29980721 -90303591 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 813 459 275 17 50 chr13 29981192 29981385 -90302927 + B3 SINE B2 4 192 -6 7 813 211 173 365 0 chr13 29981596 29981648 -90302664 + ID4 SINE ID 2 72 -11 7 813 1241 123 37 0 chr13 29981805 29981992 -90302320 - B2_Mm2 SINE B2 -1 194 1 7 813 508 290 51 6 chr13 29982449 29982605 -90301707 - RSINE1 SINE B4 0 165 3 7 813 1145 75 7 0 chr13 29982696 29982842 -90301470 - B1_Mus1 SINE Alu 0 148 2 7 813 659 269 109 22 chr13 29982873 29983185 -90301127 - L1MA4 LINE L1 -368 5932 5594 7 813 35307 94 17 18 chr13 29983755 29990105 -90294207 - L1Md_F2 LINE L1 -2 6580 244 7 813 316 160 0 0 chr13 29990105 29990155 -90294157 - L1Md_F2 LINE L1 -6260 378 329 7 813 1457 48 26 11 chr13 29990170 29990359 -90293953 - B2_Mm1t SINE B2 0 193 2 7 813 721 245 9 82 chr13 29990380 29990611 -90293701 - B3 SINE B2 -2 214 1 7 813 22 0 0 0 chr13 29990636 29990658 -90293654 + AT_rich Low_complexity Low_complexity 1 22 0 7 813 557 227 34 0 chr13 29990662 29990781 -90293531 - B3A SINE B2 -66 132 10 7 813 235 235 20 0 chr13 29990828 29990879 -90293433 - L1M5 LINE L1 -599 5574 5523 7 813 285 286 65 28 chr13 29990888 29991077 -90293235 - L1M2 LINE L1 -3944 2605 2403 7 813 261 0 0 0 chr13 29991088 29991117 -90293195 + (T)n Simple_repeat Simple_repeat 1 29 0 7 813 497 237 67 0 chr13 29991185 29991320 -90292992 - MTC LTR MaLR -14 407 264 7 813 531 214 0 0 chr13 29991330 29991428 -90292884 - Lx5 LINE L1 -687 6363 6266 7 813 226 284 90 11 chr13 29991522 29991611 -90292701 - B4 SINE B4 -194 98 3 7 813 449 174 120 0 chr13 29991746 29991838 -90292474 + MTD LTR MaLR 18 120 -299 7 813 1038 134 196 0 chr13 29991854 29992033 -90292279 - B3 SINE B2 0 216 3 7 813 859 212 43 11 chr13 29992093 29992296 -90292016 + B3 SINE B2 1 193 -2 7 813 353 252 75 30 chr13 29992281 29992393 -90291919 + MTD LTR MaLR 191 297 -124 7 813 1523 230 79 26 chr13 29992432 29992662 -90291650 - MT2A LTR ERVL -82 451 209 7 813 1911 54 111 0 chr13 29992662 29992923 -90291389 + Lx3_Mus LINE L1 6714 7003 -6 7 813 189 0 0 0 chr13 29992924 29992945 -90291367 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 7 813 1523 230 79 26 chr13 29992945 29993140 -90291172 - MT2A LTR ERVL -325 208 1 7 813 213 39 0 0 chr13 29993539 29993565 -90290747 + (AGGGGG)n Simple_repeat Simple_repeat 3 28 0 7 813 691 213 57 45 chr13 29993644 29993821 -90290491 + B3A SINE B2 4 182 -16 7 813 375 288 116 116 chr13 29995188 29995420 -90288892 - ORR1E LTR MaLR -2 357 97 7 813 675 226 29 78 chr13 29995420 29995626 -90288686 + B3A SINE B2 3 198 0 7 813 375 288 116 116 chr13 29995626 29995747 -90288565 - ORR1E LTR MaLR -263 96 4 7 813 218 111 21 43 chr13 29996263 29996310 -90288002 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 7 813 498 250 19 0 chr13 29996315 29996423 -90287889 - RSINE1 SINE B4 -40 125 16 7 813 696 78 20 0 chr13 29996983 29997085 -90287227 - B2_Mm2 SINE B2 -58 137 34 7 813 24 0 0 0 chr13 29997097 29997121 -90287191 + AT_rich Low_complexity Low_complexity 1 24 0 7 813 583 193 76 62 chr13 29997157 29997301 -90287011 + B1_Mus1 SINE Alu 5 150 0 7 813 869 252 110 27 chr13 29997513 29997885 -90286427 + L1MB5 LINE L1 5712 6115 -59 7 813 957 221 23 42 chr13 29998153 29998370 -90285942 + ID_B1 SINE B4 4 216 -8 7 813 236 175 0 16 chr13 29998582 29998646 -90285666 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 7 813 276 30 0 0 chr13 30002071 30002104 -90282208 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 813 21 0 0 0 chr13 30002245 30002266 -90282046 + AT_rich Low_complexity Low_complexity 1 21 0 2 813 473 300 16 137 chr13 30003337 30003592 -90280720 + MER58A DNA MER1_type 1 224 0 3 813 698 173 0 0 chr13 30003814 30003924 -90280388 - B1_Mus1 SINE Alu -37 111 2 4 813 31 26 0 0 chr13 30003926 30003964 -90280348 + AT_rich Low_complexity Low_complexity 1 38 0 5 813 743 189 151 36 chr13 30003992 30004184 -90280128 - B3 SINE B2 -1 215 2 6 813 656 165 233 12 chr13 30004219 30004391 -90279921 - B3 SINE B2 -2 214 5 7 813 705 244 32 49 chr13 30004405 30004590 -90279722 - B3 SINE B2 -31 185 4 8 813 287 251 172 63 chr13 30005824 30005998 -90278314 + Charlie22a DNA MER1_type 292 484 -7 9 813 190 261 15 44 chr13 30006078 30006146 -90278166 - L2 LINE L2 -1284 2135 2070 1 813 435 215 94 100 chr13 30006267 30006427 -90277885 - RSINE1 SINE B4 -4 161 3 1 813 399 232 0 0 chr13 30006455 30006537 -90277775 - B3 SINE B2 -4 212 131 1 813 601 139 55 18 chr13 30006560 30006670 -90277642 - B1_Mur1 SINE Alu -1 148 35 1 813 555 16 0 0 chr13 30007293 30007357 -90276955 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 1 813 569 201 44 94 chr13 30007359 30007518 -90276794 - RSINE1 SINE B4 -3 162 12 1 813 604 181 12 7 chr13 30007526 30007646 -90276666 - B1_Mur1 SINE Alu -1 146 1 1 813 416 248 110 83 chr13 30007661 30007806 -90276506 - B1_Mur1 SINE Alu 0 149 1 1 813 274 384 24 3 chr13 30007898 30008025 -90276287 - PB1D10 SINE Alu -14 135 1 1 813 307 279 105 9 chr13 30008066 30008171 -90276141 - PB1D10 SINE Alu 0 117 3 1 813 333 244 12 35 chr13 30008182 30008267 -90276045 + L1MEg LINE L1 1870 1952 -4132 2 813 197 65 0 31 chr13 30008267 30008299 -90276013 + (GAAAA)n Simple_repeat Simple_repeat 3 33 0 2 813 513 0 0 0 chr13 30008544 30008601 -90275711 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 813 236 235 0 128 chr13 30009372 30009450 -90274862 - ID4 SINE ID -14 69 2 2 813 413 301 73 33 chr13 30009486 30009637 -90274675 - RSINE1 SINE B4 -6 159 3 2 813 556 263 168 0 chr13 30010081 30010271 -90274041 - ID_B1 SINE B4 0 224 3 2 813 693 224 103 0 chr13 30011458 30011623 -90272689 - ID_B1 SINE B4 -7 217 36 2 813 24 0 0 0 chr13 30011823 30011847 -90272465 + AT_rich Low_complexity Low_complexity 1 24 0 2 813 736 317 0 23 chr13 30013204 30013375 -90270937 - B4 SINE B4 -14 278 112 2 101 494 314 137 42 chr13 30015254 30015560 -90268752 - ORR1E LTR MaLR -6 353 19 2 814 806 290 140 25 chr13 30015515 30015830 -90268482 + MER21B LTR ERV1 152 502 -361 3 814 338 253 52 21 chr13 30015844 30015941 -90268371 + MER21B LTR ERV1 568 667 -196 3 814 648 268 32 0 chr13 30016202 30016359 -90267953 - B3A SINE B2 -36 162 1 3 814 689 281 29 12 chr13 30016376 30016549 -90267763 - B3A SINE B2 -22 176 1 3 814 1206 48 0 14 chr13 30017105 30017253 -90267059 - B1_Mm SINE Alu -1 146 1 3 814 552 184 74 81 chr13 30017360 30017508 -90266804 - B1_Mur2 SINE Alu -1 148 2 3 814 561 254 28 21 chr13 30018144 30018289 -90266023 + B1_Mur3 SINE Alu 1 146 -3 3 814 652 294 47 6 chr13 30018808 30018979 -90265333 - B3A SINE B2 -11 187 10 3 814 780 200 78 44 chr13 30019024 30019228 -90265084 - B3 SINE B2 -4 212 2 3 814 358 289 102 0 chr13 30019598 30019726 -90264586 + RMER15 LTR ERVL 422 562 -13 3 814 2213 254 97 25 chr13 30020036 30020093 -90264219 + RCHARR1 DNA MER1_type 4 58 -916 3 814 423 0 0 0 chr13 30020093 30020140 -90264172 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 814 2213 254 97 25 chr13 30020140 30020771 -90263541 + RCHARR1 DNA MER1_type 59 741 -233 3 814 228 224 19 3 chr13 30020800 30020862 -90263450 - ID4_ SINE ID -84 68 7 4 814 1036 219 21 12 chr13 30020866 30021107 -90263205 + RCHARR1 DNA MER1_type 724 966 -8 3 814 434 280 55 23 chr13 30021341 30021469 -90262843 + MLT1N2 LTR MaLR 415 546 -16 4 814 762 243 90 0 chr13 30021730 30021919 -90262393 - B3 SINE B2 -10 206 1 4 814 414 257 74 114 chr13 30021935 30021958 -90262354 - B2_Mm2 SINE B2 -1 194 174 4 814 559 256 31 43 chr13 30021958 30022121 -90262191 - RSINE1 SINE B4 -3 162 2 4 814 572 257 74 114 chr13 30022121 30022299 -90262013 - B3A SINE B2 -22 173 1 4 814 240 35 0 0 chr13 30022377 30022406 -90261906 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 4 814 337 299 13 77 chr13 30022687 30022843 -90261469 + B1F2 SINE Alu 2 147 -2 4 814 1869 179 68 58 chr13 30022973 30023387 -90260925 + MTC LTR MaLR 2 419 -2 4 814 365 115 173 37 chr13 30023392 30023473 -90260839 + PB1D10 SINE Alu 26 117 0 4 814 220 133 0 22 chr13 30023473 30023519 -90260793 + A-rich Low_complexity Low_complexity 5 49 0 5 814 596 244 97 16 chr13 30023521 30023690 -90260622 + B3A SINE B2 7 194 -1 5 814 3019 3 0 0 chr13 30024268 30024598 -90259714 - L1Md_A LINE L1 0 6582 6253 5 814 342 230 34 11 chr13 30024735 30024823 -90259489 - MER58A DNA MER1_type -111 113 24 5 814 645 291 97 58 chr13 30024941 30025200 -90259112 - B4 SINE B4 -16 276 8 5 814 770 186 56 14 chr13 30025218 30025360 -90258952 - B1_Mur1 SINE Alu 0 149 2 5 814 448 319 107 85 chr13 30025854 30026444 -90257868 + L1MEc LINE L1 230 832 -5568 5 814 247 233 124 19 chr13 30026453 30026537 -90257775 + PB1D10 SINE Alu 1 92 -25 5 814 736 70 0 52 chr13 30026537 30026672 -90257640 + (TCTA)n Simple_repeat Simple_repeat 1 128 0 5 814 247 233 124 19 chr13 30026672 30026692 -90257620 + PB1D10 SINE Alu 93 115 -2 5 814 1035 66 0 0 chr13 30026701 30026837 -90257475 + (TCTA)n Simple_repeat Simple_repeat 1 136 0 5 814 480 275 50 38 chr13 30026861 30027020 -90257292 + RSINE1 SINE B4 3 163 -2 6 814 419 228 227 31 chr13 30027024 30027187 -90257125 + L1MEc LINE L1 1398 1592 -4808 5 814 210 125 250 0 chr13 30027265 30027321 -90256991 + ID2 SINE ID 3 72 -11 6 814 670 259 19 68 chr13 30027489 30027696 -90256616 + B3A SINE B2 2 198 0 6 814 434 247 0 11 chr13 30027790 30027880 -90256432 - B4 SINE B4 0 292 204 6 814 772 227 63 34 chr13 30027990 30028195 -90256117 + B3 SINE B2 3 213 -3 6 814 24 0 0 0 chr13 30028195 30028219 -90256093 + AT_rich Low_complexity Low_complexity 1 24 0 6 814 22 35 0 0 chr13 30028389 30028418 -90255894 + AT_rich Low_complexity Low_complexity 1 29 0 6 814 735 189 8 8 chr13 30028418 30028551 -90255761 - B1_Mur1 SINE Alu -6 143 11 6 814 360 244 36 121 chr13 30028457 30028597 -90255715 - MT2B LTR ERVL -344 257 130 6 814 468 0 0 0 chr13 30029841 30029893 -90254419 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 814 342 276 28 9 chr13 30029897 30030003 -90254309 - RSINE1 SINE B4 -56 109 2 7 814 386 279 101 0 chr13 30030005 30030134 -90254178 + RCHARR1 DNA MER1_type 23 164 -810 7 814 455 271 85 0 chr13 30030178 30030296 -90254016 - RSINE1 SINE B4 -36 129 2 7 814 1084 264 24 55 chr13 30030296 30030576 -90253736 + RCHARR1 DNA MER1_type 198 468 -506 7 814 540 158 30 0 chr13 30030577 30030678 -90253634 + RCHARR1 DNA MER1_type 755 858 -116 7 814 543 232 31 73 chr13 30031643 30031834 -90252478 - B4A SINE B4 -1 291 109 7 814 687 255 20 26 chr13 30032395 30032548 -90251764 - RSINE1 SINE B4 0 165 14 7 814 194 397 28 21 chr13 30032604 30032748 -90251564 - MER5B DNA MER1_type -5 173 29 7 814 795 252 81 24 chr13 30033920 30034131 -90250181 - ID_B1 SINE B4 0 224 2 7 814 325 221 111 37 chr13 30034783 30034891 -90249421 + PB1D10 SINE Alu 2 117 0 7 814 323 285 84 18 chr13 30034927 30035068 -90249244 + B4 SINE B4 15 158 -66 7 814 183 129 0 0 chr13 30035274 30035305 -90249007 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 7 814 1008 156 0 0 chr13 30035305 30035485 -90248827 + GA-rich Low_complexity Low_complexity 1 180 0 8 814 272 305 85 15 chr13 30035682 30035702 -90248610 + ID_B1 SINE B4 78 172 -52 8 814 296 274 48 10 chr13 30035702 30035805 -90248507 + B1F SINE Alu 18 124 -25 8 814 269 276 240 20 chr13 30036004 30036104 -90248208 + RSINE1 SINE B4 8 129 -36 8 814 468 62 0 0 chr13 30036123 30036187 -90248125 + (TC)n Simple_repeat Simple_repeat 1 64 0 8 814 585 241 28 0 chr13 30036234 30036379 -90247933 + B1_Mur3 SINE Alu 1 149 0 8 814 322 294 11 11 chr13 30036579 30036672 -90247640 + B4 SINE B4 4 96 -196 8 814 293 176 90 51 chr13 30036686 30036764 -90247548 + PB1D9 SINE Alu 39 119 -1 8 814 405 0 0 0 chr13 30036794 30036839 -90247473 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 814 342 0 0 0 chr13 30036839 30036876 -90247436 + (GA)n Simple_repeat Simple_repeat 2 39 0 8 814 244 275 75 109 chr13 30036885 30037032 -90247280 + B1F2 SINE Alu 5 146 -3 9 814 708 197 15 94 chr13 30036902 30037104 -90247208 + B4 SINE B4 107 292 0 8 814 298 263 13 13 chr13 30037712 30037789 -90246523 - ID2 SINE ID -5 78 2 9 814 812 223 6 31 chr13 30038511 30038673 -90245639 + B3 SINE B2 2 159 -57 9 814 218 323 41 10 chr13 30038678 30038729 -90245583 + B3A SINE B2 99 152 -46 9 814 428 0 19 0 chr13 30038729 30038781 -90245531 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 814 333 0 0 0 chr13 30038786 30038823 -90245489 + (GA)n Simple_repeat Simple_repeat 2 38 0 9 814 218 323 41 10 chr13 30038823 30038862 -90245450 + B3A SINE B2 158 197 -1 9 814 332 245 245 0 chr13 30040361 30040467 -90243845 + B3A SINE B2 1 132 -66 9 814 232 336 93 28 chr13 30041456 30041563 -90242749 + PB1D7 SINE Alu 1 114 -6 9 814 343 283 38 0 chr13 30042819 30042925 -90241387 + L1M4 LINE L1 5544 5653 -525 9 814 332 244 0 89 chr13 30042930 30043020 -90241292 - B3A SINE B2 -116 82 1 9 814 587 286 57 25 chr13 30043121 30043365 -90240947 + L1MB3 LINE L1 5752 6003 -180 1 814 285 184 402 34 chr13 30043446 30043599 -90240713 + B4A SINE B4 1 226 -66 1 814 651 180 132 8 chr13 30044352 30044481 -90239831 + B1_Mur1 SINE Alu 5 149 0 1 814 643 221 238 0 chr13 30044754 30044926 -90239386 - ID_B1 SINE B4 -2 222 10 1 814 730 263 149 8 chr13 30045030 30045279 -90239033 + B4 SINE B4 1 284 -8 1 814 765 255 74 15 chr13 30045368 30045527 -90238785 + B3 SINE B2 1 166 -50 1 814 186 71 0 0 chr13 30045527 30045555 -90238757 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 814 765 255 74 15 chr13 30045555 30045598 -90238714 + B3 SINE B2 167 214 -2 1 814 311 308 82 8 chr13 30046340 30046376 -90237936 + B4A SINE B4 50 95 -197 1 814 449 194 67 134 chr13 30046376 30046525 -90237787 + B1_Mus1 SINE Alu 2 140 -9 1 814 258 295 206 15 chr13 30046996 30047127 -90237185 - MIRc SINE MIR -106 162 7 1 814 183 162 0 0 chr13 30047396 30047433 -90236879 + C-rich Low_complexity Low_complexity 8 44 0 1 814 346 267 89 78 chr13 30047853 30047932 -90236380 - B3A SINE B2 -17 181 1 1 814 514 204 0 20 chr13 30047932 30048032 -90236280 - B4A SINE B4 -194 98 1 1 814 357 233 131 4 chr13 30048177 30048289 -90236023 - B1_Mur4 SINE Alu -25 122 2 1 814 243 247 60 36 chr13 30048216 30048300 -90236012 - MT2B LTR ERVL -361 240 155 1 814 24 0 0 0 chr13 30048446 30048470 -90235842 + AT_rich Low_complexity Low_complexity 1 24 0 1 814 231 84 309 0 chr13 30048671 30048750 -90235562 + B1_Mur4 SINE Alu 6 115 -5 1 814 244 272 40 73 chr13 30048949 30049052 -90235260 + MIRm SINE MIR 87 191 -71 1 814 300 217 65 26 chr13 30050066 30050195 -90234117 - ID_B1 SINE B4 -18 206 5 1 814 266 348 69 21 chr13 30050220 30050364 -90233948 - Charlie4 DNA MER1_type -32 1929 1779 1 814 508 228 39 47 chr13 30050527 30050656 -90233656 + B1F SINE Alu 22 149 0 1 814 1537 175 231 0 chr13 30050861 30051203 -90233109 + MTC LTR MaLR 1 421 0 1 814 432 0 0 0 chr13 30051239 30051287 -90233025 + (TATG)n Simple_repeat Simple_repeat 3 50 0 1 814 477 265 42 75 chr13 30052023 30052298 -90232014 + MLT1B LTR MaLR 21 340 -50 1 814 331 250 0 14 chr13 30052705 30052774 -90231538 - B4A SINE B4 -2 290 223 1 814 458 296 64 0 chr13 30052808 30052933 -90231379 - RSINE1 SINE B4 -21 144 12 1 814 555 152 383 27 chr13 30052939 30053088 -90231224 - B3 SINE B2 -14 202 1 1 814 218 128 0 49 chr13 30053137 30053169 -90231143 - B4A SINE B4 -211 81 50 1 814 330 26 0 0 chr13 30053169 30053208 -90231104 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 814 414 0 0 0 chr13 30053404 30053450 -90230862 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 814 688 289 119 21 chr13 30053809 30054095 -90230217 + RMER15 LTR ERVL 262 575 0 1 814 814 263 21 5 chr13 30054284 30054475 -90229837 + B4A SINE B4 91 284 -8 1 814 21 36 0 0 chr13 30054511 30054539 -90229773 + GC_rich Low_complexity Low_complexity 1 28 0 1 814 402 342 81 10 chr13 30054542 30054740 -90229572 - Tigger7 DNA MER2_type -1751 740 529 1 814 588 261 223 0 chr13 30054753 30054918 -90229394 - Tigger7 DNA MER2_type -2070 421 229 1 814 192 40 0 0 chr13 30054918 30054943 -90229369 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 814 588 261 223 0 chr13 30054943 30055015 -90229297 - Tigger7 DNA MER2_type -2263 228 133 1 814 668 278 53 10 chr13 30055083 30055290 -90229022 + B3 SINE B2 1 216 0 1 814 438 281 126 37 chr13 30055581 30055795 -90228517 - B4 SINE B4 -58 234 2 1 814 210 216 0 0 chr13 30057113 30057150 -90227162 - ID4_ SINE ID -46 37 1 1 814 320 209 228 94 chr13 30057301 30057555 -90226757 + B4 SINE B4 1 288 -4 1 814 291 54 0 0 chr13 30057566 30057603 -90226709 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 1 814 351 132 0 0 chr13 30057603 30057671 -90226641 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 814 383 0 21 0 chr13 30057671 30057718 -90226594 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 814 243 178 158 40 chr13 30058134 30058210 -90226102 - RMER30 DNA MER1_type -19 183 99 1 814 1136 69 7 0 chr13 30058210 30058355 -90225957 - B1_Mus2 SINE Alu 0 147 2 1 814 421 280 68 0 chr13 30058447 30058565 -90225747 - RMER1C Other Other -149 1193 1068 1 814 645 311 70 8 chr13 30058645 30058888 -90225424 - RMER1C Other Other -594 748 491 1 814 231 315 81 58 chr13 30059209 30059381 -90224931 - RMER12 LTR ERVK -461 861 686 1 814 1149 116 39 0 chr13 30059717 30059898 -90224414 - URR1B DNA MER1_type 0 225 38 1 814 422 293 129 0 chr13 30059906 30060046 -90224266 - MER2 DNA MER2_type -186 159 2 1 814 774 244 75 16 chr13 30060588 30060775 -90223537 - B4 SINE B4 -23 269 72 1 814 293 279 0 37 chr13 30062775 30062857 -90221455 - ID4_ SINE ID -3 80 2 1 814 374 278 124 23 chr13 30063313 30063442 -90220870 + ID_B1 SINE B4 83 224 0 1 814 201 318 91 0 chr13 30063741 30063829 -90220483 - MER5A DNA MER1_type -61 128 33 1 814 976 266 96 48 chr13 30064692 30064964 -90219348 + B4 SINE B4 2 286 -6 1 814 581 279 72 6 chr13 30065049 30065215 -90219097 + MER20 DNA MER1_type 1 177 -42 1 814 223 286 267 6 chr13 30065548 30065713 -90218599 - MIRb SINE MIR -60 208 1 1 814 180 0 0 0 chr13 30066249 30066269 -90218043 + (CCCCAG)n Simple_repeat Simple_repeat 1 20 0 1 814 234 293 26 26 chr13 30066916 30066993 -90217319 - B4A SINE B4 0 292 216 1 814 204 40 0 0 chr13 30066997 30067022 -90217290 + (CCCCCT)n Simple_repeat Simple_repeat 3 27 0 1 814 510 221 29 0 chr13 30067034 30067138 -90217174 - PB1D9 SINE Alu -7 113 7 1 814 245 250 193 52 chr13 30067138 30067159 -90217153 - B4A SINE B4 -61 187 78 1 814 615 271 7 40 chr13 30067146 30067296 -90217016 - B4A SINE B4 -61 231 87 1 814 298 402 44 9 chr13 30068069 30068295 -90216017 + MIR SINE MIR 29 262 0 1 814 256 330 106 0 chr13 30068320 30068414 -90215898 + MER102b DNA MER1_type 15 118 -223 1 814 299 172 34 17 chr13 30068614 30068673 -90215639 - PB1D10 SINE Alu -5 112 53 1 814 574 240 104 0 chr13 30068985 30069110 -90215202 - ID_B1 SINE B4 0 224 87 1 814 220 269 207 16 chr13 30069837 30069874 -90214438 + B1F SINE Alu 5 148 -1 1 814 277 262 36 0 chr13 30069874 30069958 -90214354 + ID_B1 SINE B4 135 221 -3 1 814 218 301 45 63 chr13 30071787 30071944 -90212368 + MIRm SINE MIR 57 199 -69 1 814 372 22 0 0 chr13 30072947 30072992 -90211320 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 814 402 115 0 0 chr13 30073233 30073294 -90211018 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 814 330 297 131 18 chr13 30073861 30074029 -90210283 - MIRb SINE MIR -16 252 66 1 814 253 338 39 0 chr13 30074241 30074318 -90209994 + ID_B1 SINE B4 79 158 -66 1 814 304 244 174 0 chr13 30074257 30074343 -90209969 + PB1D10 SINE Alu 17 117 0 1 814 304 208 16 62 chr13 30076034 30076162 -90208150 + G-rich Low_complexity Low_complexity 1 122 0 1 814 219 200 40 0 chr13 30076371 30076421 -90207891 + G-rich Low_complexity Low_complexity 2 53 0 1 814 22 0 0 0 chr13 30077384 30077406 -90206906 + GC_rich Low_complexity Low_complexity 1 22 0 1 814 828 295 50 18 chr13 30079071 30079354 -90204958 + B4A SINE B4 1 292 0 1 814 353 22 0 21 chr13 30079616 30079663 -90204649 + (TTA)n Simple_repeat Simple_repeat 2 47 0 1 814 190 214 0 23 chr13 30080284 30080327 -90203985 + MIRc SINE MIR 31 72 -196 1 814 598 25 25 0 chr13 30080334 30080414 -90203898 + (TCC)n Simple_repeat Simple_repeat 2 83 0 1 814 442 0 35 0 chr13 30080417 30080475 -90203837 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 814 502 282 8 24 chr13 30080496 30080623 -90203689 + RSINE1 SINE B4 4 128 -37 1 814 359 289 68 56 chr13 30080675 30080836 -90203476 - RSINE1 SINE B4 0 165 3 1 814 809 252 7 0 chr13 30082039 30082194 -90202118 - B3A SINE B2 -41 157 2 1 814 309 89 0 0 chr13 30082337 30082382 -90201930 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 814 257 316 80 31 chr13 30083350 30083513 -90200799 - L1ME3B LINE L1 -45 6195 6025 1 814 273 211 27 126 chr13 30083556 30083667 -90200645 - MTEb LTR MaLR -29 350 251 1 814 251 367 85 58 chr13 30083761 30083949 -90200363 - MTEb LTR MaLR -163 196 4 1 814 431 322 31 63 chr13 30084109 30084268 -90200044 + RSINE1 SINE B4 2 155 -10 1 814 206 250 0 0 chr13 30084557 30084605 -90199707 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 1 814 334 211 9 9 chr13 30084640 30084755 -90199557 + (TG)n Simple_repeat Simple_repeat 2 116 0 1 814 473 262 42 112 chr13 30084774 30084809 -90199503 - B4 SINE B4 0 292 260 1 814 198 71 0 0 chr13 30084809 30084837 -90199475 + (CAGAGA)n Simple_repeat Simple_repeat 2 29 0 1 814 473 262 42 112 chr13 30084837 30085016 -90199296 - B4 SINE B4 -33 259 93 1 814 946 248 14 50 chr13 30085016 30085230 -90199082 + RLTR11B LTR ERVK 1 202 -251 1 814 597 28 0 0 chr13 30085230 30085301 -90199011 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 814 946 248 14 50 chr13 30085301 30085383 -90198929 + RLTR11B LTR ERVK 203 286 -167 1 814 541 286 50 46 chr13 30085387 30085664 -90198648 + RLTR12B LTR ERVK 242 508 -20 1 814 470 259 0 108 chr13 30085665 30085795 -90198517 - B4 SINE B4 -174 118 3 1 814 1053 130 165 10 chr13 30086199 30086393 -90197919 + URR1B DNA MER1_type 1 224 -1 1 814 416 237 108 6 chr13 30086875 30087032 -90197280 - L1MB4 LINE L1 -1 6179 6007 1 814 707 232 31 112 chr13 30087035 30087318 -90196994 - MTEa LTR MaLR 0 379 75 1 814 848 275 94 41 chr13 30087356 30087750 -90196562 - L1MB4 LINE L1 -172 6008 5594 1 814 318 388 28 50 chr13 30087813 30087992 -90196320 + MER3 DNA MER1_type 7 181 -28 1 814 674 227 88 30 chr13 30088071 30088334 -90195978 - Ricksha DNA MuDR -57 3189 2912 1 814 2344 90 19 12 chr13 30088336 30088661 -90195651 - ORR1A2 LTR MaLR 0 327 1 1 814 491 323 0 22 chr13 30088687 30088823 -90195489 + ID_B1 SINE B4 92 224 0 1 814 1084 272 25 23 chr13 30088875 30089228 -90195084 - Ricksha DNA MuDR -469 2777 2424 1 814 884 164 0 7 chr13 30089269 30089410 -90194902 + B1_Mus1 SINE Alu 1 140 -8 2 814 664 43 11 11 chr13 30089421 30089514 -90194798 + (GGGA)n Simple_repeat Simple_repeat 1 93 0 2 814 764 243 40 6 chr13 30089540 30089714 -90194598 + ID_B1 SINE B4 44 223 -1 2 814 961 243 92 51 chr13 30089954 30090270 -90194042 - Ricksha DNA MuDR -1149 2097 1769 1 814 225 240 0 20 chr13 30090330 30090381 -90193931 + ID_B1 SINE B4 175 224 0 2 814 763 258 54 27 chr13 30090392 30090615 -90193697 - Ricksha DNA MuDR -1475 1771 1543 1 814 763 250 26 37 chr13 30090668 30090859 -90193453 - MTEa LTR MaLR 0 379 191 2 814 529 263 59 22 chr13 30090858 30090986 -90193326 + RSINE1 SINE B4 8 141 -24 2 814 396 0 0 0 chr13 30090986 30091030 -90193282 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 814 1521 207 47 154 chr13 30091041 30091463 -90192849 + ORR1C2 LTR MaLR 8 384 0 2 814 243 88 0 0 chr13 30091470 30091504 -90192808 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 2 814 746 204 20 7 chr13 30091507 30091655 -90192657 - MTEa LTR MaLR -207 152 3 2 814 635 250 94 29 chr13 30091657 30092020 -90192292 - Ricksha DNA MuDR -1765 1481 1071 1 814 513 47 0 0 chr13 30092068 30092132 -90192180 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 814 380 262 12 0 chr13 30092146 30092230 -90192082 - Ricksha DNA MuDR -3167 79 1 1 814 207 279 16 0 chr13 30092647 30092708 -90191604 + GA-rich Low_complexity Low_complexity 3 64 0 2 814 249 108 0 0 chr13 30093365 30093402 -90190910 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 2 814 2193 64 0 14 chr13 30093851 30094137 -90190175 - L1Md_F2 LINE L1 -1 6581 6300 2 814 363 296 128 0 chr13 30094156 30094281 -90190031 - ID_B1 SINE B4 -7 217 77 2 814 325 312 0 10 chr13 30094300 30094397 -90189915 - ID_B1 SINE B4 -1 223 128 2 814 285 146 0 0 chr13 30095843 30095891 -90188421 + (TTTTC)n Simple_repeat Simple_repeat 4 51 0 2 814 389 283 105 75 chr13 30096142 30096409 -90187903 - B4 SINE B4 -16 276 2 2 814 684 267 175 55 chr13 30096729 30097038 -90187274 - ORR1E LTR MaLR -12 347 2 2 814 251 312 37 24 chr13 30097523 30097605 -90186707 - Charlie26a DNA MER1_type -19 306 224 2 814 282 250 88 33 chr13 30098509 30098592 -90185720 + B1_Mus2 SINE Alu 52 140 -7 2 814 330 26 0 0 chr13 30098592 30098631 -90185681 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2 814 493 301 12 55 chr13 30099474 30099495 -90184817 - B4A SINE B4 -4 288 270 2 814 332 119 17 0 chr13 30099495 30099554 -90184758 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 814 493 301 12 55 chr13 30099554 30099697 -90184615 - B4A SINE B4 -23 269 131 2 814 223 300 0 41 chr13 30099694 30099767 -90184545 - B3A SINE B2 -127 71 2 2 814 319 327 52 89 chr13 30099844 30100092 -90184220 + L2c LINE L2 3110 3348 -39 2 814 399 359 113 63 chr13 30100679 30101042 -90183270 - LTR33 LTR ERVL -98 417 37 2 814 180 0 0 0 chr13 30101414 30101434 -90182878 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 814 408 232 112 35 chr13 30101527 30101643 -90182669 + B1F SINE Alu 22 146 -3 2 814 600 261 63 13 chr13 30101636 30101795 -90182517 + B3A SINE B2 27 193 -5 2 814 626 267 60 7 chr13 30101822 30101973 -90182339 + RSINE1 SINE B4 6 164 -1 2 814 2331 101 3 0 chr13 30101999 30102317 -90181995 + ORR1A2 LTR MaLR 1 319 -8 2 814 344 293 0 0 chr13 30102359 30102441 -90181871 + ID4_ SINE ID 2 83 0 2 814 224 133 43 22 chr13 30102615 30102661 -90181651 + (TATG)n Simple_repeat Simple_repeat 4 50 0 2 814 226 359 12 25 chr13 30102664 30102744 -90181568 - RSINE1 SINE B4 0 165 87 2 814 561 268 22 77 chr13 30102770 30102952 -90181360 - B4A SINE B4 -114 178 7 2 814 303 311 66 0 chr13 30104727 30104833 -90179479 + MIR SINE MIR 122 234 -28 2 814 420 242 62 15 chr13 30105106 30105236 -90179076 - HAL1b LINE L1 -1675 334 199 2 814 22 0 0 0 chr13 30105764 30105786 -90178526 + AT_rich Low_complexity Low_complexity 1 22 0 2 814 467 364 17 21 chr13 30106139 30106380 -90177932 + MIR SINE MIR 22 261 -1 2 814 242 284 13 13 chr13 30106616 30106691 -90177621 + L1ME4a LINE L1 5527 5601 -523 2 814 933 308 110 36 chr13 30106702 30107206 -90177106 - MLT1G LTR MaLR -1 590 11 2 814 241 295 0 0 chr13 30107227 30107288 -90177024 + L1ME4a LINE L1 5618 5678 -446 2 814 562 293 138 45 chr13 30107364 30107718 -90176594 + L1ME4a LINE L1 5662 6048 -76 2 814 686 130 25 19 chr13 30107787 30107944 -90176368 + (CATA)n Simple_repeat Simple_repeat 1 158 0 2 814 241 189 31 21 chr13 30107966 30108063 -90176249 + (CA)n Simple_repeat Simple_repeat 1 98 0 2 814 741 308 53 8 chr13 30108272 30108534 -90175778 - B4A SINE B4 -18 274 1 2 814 476 299 23 40 chr13 30108536 30108710 -90175602 - MLT1A0 LTR MaLR -38 327 157 2 814 548 233 137 55 chr13 30108736 30108918 -90175394 - B3A SINE B2 0 198 2 2 814 654 264 12 6 chr13 30108918 30109077 -90175235 - MLT1A0 LTR MaLR -205 160 1 2 814 446 250 138 69 chr13 30109726 30109885 -90174427 + MER2 DNA MER2_type 1 170 -175 2 814 528 263 138 0 chr13 30109985 30110137 -90174175 + MER2 DNA MER2_type 159 331 -14 2 814 247 341 135 57 chr13 30111519 30111852 -90172460 + MTEa LTR MaLR 5 363 -16 2 814 234 91 0 0 chr13 30112252 30112285 -90172027 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 814 262 293 26 13 chr13 30112520 30112596 -90171716 - L2b LINE L2 -8 3367 3291 2 814 432 0 0 0 chr13 30113204 30113252 -90171060 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 814 752 299 141 32 chr13 30113394 30113771 -90170541 - Lx9 LINE L1 -251 7393 6976 2 814 1090 233 188 9 chr13 30113855 30114184 -90170128 + MTD LTR MaLR 18 405 -14 2 814 397 299 121 10 chr13 30115203 30115409 -90168903 + MLT1J LTR MaLR 69 297 -215 2 814 585 69 0 0 chr13 30116089 30116176 -90168136 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 2 814 473 274 74 17 chr13 30116294 30116524 -90167788 + L1MC1 LINE L1 5709 5951 -382 2 814 363 303 38 76 chr13 30116550 30116786 -90167526 + L1MC1 LINE L1 6030 6256 -77 2 814 1401 251 55 3 chr13 30116799 30117146 -90167166 - MTEa LTR MaLR -12 367 3 2 814 335 105 18 0 chr13 30117287 30117344 -90166968 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 814 519 246 111 7 chr13 30117348 30117483 -90166829 - B3A SINE B2 -44 154 6 2 814 1751 201 63 8 chr13 30118179 30118423 -90165889 - MTD LTR MaLR 0 419 153 2 814 213 121 0 0 chr13 30118423 30118456 -90165856 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 814 1751 201 63 8 chr13 30118456 30118606 -90165706 - MTD LTR MaLR -267 152 3 2 814 737 150 8 0 chr13 30118613 30118740 -90165572 - ORR1B1 LTR MaLR 0 394 267 2 814 886 195 8 139 chr13 30118740 30118984 -90165328 - RLTR26 LTR ERVK 0 642 431 2 814 694 180 20 59 chr13 30118965 30119160 -90165152 - RLTR26 LTR ERVK -737 169 1 2 814 1205 160 112 20 chr13 30119160 30119409 -90164903 - ORR1B1 LTR MaLR -122 272 1 2 814 789 274 112 13 chr13 30120089 30120403 -90163909 + MER2 DNA MER2_type 1 345 0 2 814 358 287 18 18 chr13 30120629 30120739 -90163573 - PB1D10 SINE Alu -7 110 1 2 814 371 304 72 0 chr13 30121978 30122103 -90162209 + ID_B1 SINE B4 84 217 -7 2 814 738 281 0 11 chr13 30122119 30122306 -90162006 + B3 SINE B2 27 211 -5 2 814 1103 70 35 0 chr13 30122382 30122524 -90161788 + B1_Mus2 SINE Alu 1 147 0 2 814 324 94 0 0 chr13 30122525 30122578 -90161734 + (CAAAA)n Simple_repeat Simple_repeat 1 53 0 2 814 294 29 0 0 chr13 30123304 30123339 -90160973 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 814 345 329 6 37 chr13 30124031 30124195 -90160117 - MLT1D LTR MaLR -1 504 346 2 814 432 295 75 50 chr13 30124245 30124445 -90159867 - MLT1D LTR MaLR -280 225 21 2 814 1607 205 78 14 chr13 30124758 30125104 -90159208 - ORR1D2 LTR MaLR 0 370 3 2 814 518 244 0 34 chr13 30125311 30125430 -90158882 + ID_B1 SINE B4 109 223 -1 2 814 237 33 0 0 chr13 30125437 30125467 -90158845 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2 814 414 0 0 0 chr13 30125535 30125581 -90158731 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 814 360 0 0 0 chr13 30125582 30125622 -90158690 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 814 458 226 9 45 chr13 30125662 30125773 -90158539 - B1_Mur2 SINE Alu -25 124 18 2 814 207 100 0 0 chr13 30125775 30125805 -90158507 + (T)n Simple_repeat Simple_repeat 1 30 0 2 814 264 308 0 0 chr13 30126042 30126160 -90158152 + (TG)n Simple_repeat Simple_repeat 1 118 0 2 814 894 68 0 0 chr13 30126202 30126320 -90157992 + (TTTC)n Simple_repeat Simple_repeat 3 120 0 2 814 942 260 43 50 chr13 30126366 30126645 -90157667 - MTE2a LTR MaLR -2 377 101 2 814 475 150 38 48 chr13 30126702 30126807 -90157505 + B4A SINE B4 177 280 -12 2 814 1216 226 66 9 chr13 30127062 30127427 -90156885 + MTD LTR MaLR 13 419 0 2 814 182 118 29 0 chr13 30127509 30127543 -90156769 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 2 814 481 239 168 35 chr13 30127760 30127903 -90156409 + RSINE1 SINE B4 4 165 0 2 814 360 64 0 0 chr13 30127928 30127975 -90156337 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 814 504 0 0 0 chr13 30127975 30128030 -90156282 + (GA)n Simple_repeat Simple_repeat 2 57 0 2 814 585 297 19 14 chr13 30128815 30129030 -90155282 - MER33 DNA MER1_type -92 232 17 2 814 1008 255 31 8 chr13 30129686 30129947 -90154365 - MER2 DNA MER2_type -7 338 72 2 814 188 135 27 0 chr13 30129950 30129987 -90154325 + T-rich Low_complexity Low_complexity 2 39 0 2 814 338 346 26 0 chr13 30130602 30130755 -90153557 - MIRb SINE MIR -38 230 74 2 814 1491 199 64 3 chr13 30131559 30131857 -90152455 + MTD LTR MaLR 10 325 -94 2 814 531 0 0 0 chr13 30132010 30132069 -90152243 + (TC)n Simple_repeat Simple_repeat 1 59 0 2 814 261 0 0 0 chr13 30132752 30132781 -90151531 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 814 219 229 0 0 chr13 30134469 30134530 -90149782 + CT-rich Low_complexity Low_complexity 1 61 0 2 814 311 299 62 0 chr13 30134540 30134637 -90149675 - PB1D10 SINE Alu -6 111 9 2 814 549 234 0 0 chr13 30135962 30136069 -90148243 + PB1D9 SINE Alu 3 109 -11 2 814 564 262 0 21 chr13 30136239 30136383 -90147929 - B1_Mur1 SINE Alu -2 147 7 2 814 378 0 0 0 chr13 30136398 30136440 -90147872 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 2 814 1492 65 16 0 chr13 30136503 30136688 -90147624 + B2_Mm2 SINE B2 1 188 -7 2 814 235 105 35 0 chr13 30137565 30137622 -90146690 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 3 814 875 210 109 25 chr13 30137636 30137875 -90146437 - MTE2b LTR MaLR -31 348 90 3 814 197 77 51 0 chr13 30137877 30137916 -90146396 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 3 814 285 216 81 0 chr13 30137996 30138070 -90146242 - MTE2b LTR MaLR -299 80 1 3 814 405 309 0 16 chr13 30140550 30140675 -90143637 + PB1 SINE Alu 2 124 -3 3 814 552 250 14 18 chr13 30140887 30141036 -90143276 - ID_B1 SINE B4 -63 229 86 3 814 359 254 77 63 chr13 30141190 30141333 -90142979 + L1MC3 LINE L1 7360 7504 -281 3 814 563 136 26 13 chr13 30141402 30141558 -90142754 + (TAGA)n Simple_repeat Simple_repeat 3 160 0 3 814 592 250 0 8 chr13 30141608 30141733 -90142579 + B3A SINE B2 1 124 -74 3 814 312 240 19 94 chr13 30142598 30142704 -90141608 + MER5A1 DNA MER1_type 27 124 -42 3 814 454 19 0 0 chr13 30143372 30143424 -90140888 + (GA)n Simple_repeat Simple_repeat 2 53 0 3 814 568 99 18 26 chr13 30143424 30143538 -90140774 + (GGAA)n Simple_repeat Simple_repeat 4 116 0 3 814 228 255 52 113 chr13 30143538 30143653 -90140659 + MamGypLTR2c LTR Gypsy 835 942 -126 3 814 819 244 0 33 chr13 30144828 30145040 -90139272 - B3 SINE B2 -5 211 7 3 814 600 53 0 0 chr13 30145043 30145119 -90139193 + (TTCC)n Simple_repeat Simple_repeat 2 77 0 3 814 478 244 89 0 chr13 30145122 30145245 -90139067 - MER57F LTR ERV1 -289 147 14 3 814 489 17 0 0 chr13 30145266 30145324 -90138988 + (GA)n Simple_repeat Simple_repeat 1 58 0 3 814 250 371 76 0 chr13 30145324 30145429 -90138883 - RSINE1 SINE B4 -51 114 2 3 814 828 286 31 9 chr13 30145429 30145653 -90138659 - B4A SINE B4 -62 230 2 3 814 235 281 44 22 chr13 30145833 30145924 -90138388 + ORR1E LTR MaLR 52 144 -215 3 814 455 272 29 22 chr13 30146124 30146263 -90138049 - ID_B1 SINE B4 0 224 85 3 815 861 208 0 13 chr13 30146703 30146714 -90137598 - B1_Mur1 SINE Alu 0 149 140 3 815 342 0 0 0 chr13 30146714 30146752 -90137560 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 3 815 861 208 0 13 chr13 30146752 30146891 -90137421 - B1_Mur1 SINE Alu -10 139 1 3 815 250 202 230 60 chr13 30147263 30147363 -90136949 + PB1D10 SINE Alu 1 117 0 3 815 236 53 26 0 chr13 30147370 30147408 -90136904 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 815 581 25 0 12 chr13 30147453 30147534 -90136778 + L1Md_F2 LINE L1 6501 6580 -2 3 815 577 259 180 21 chr13 30147702 30147935 -90136377 - B4A SINE B4 -18 274 5 3 815 5482 233 73 12 chr13 30147956 30148088 -90136224 + Lx6 LINE L1 6085 6222 -1238 3 815 2566 123 7 71 chr13 30148088 30148509 -90135803 + ORR1B1 LTR MaLR 1 394 0 3 815 5482 233 73 12 chr13 30148509 30149032 -90135280 + Lx6 LINE L1 6223 6755 -705 3 815 459 0 0 0 chr13 30149032 30149083 -90135229 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 815 5482 233 73 12 chr13 30149083 30149708 -90134604 + Lx6 LINE L1 6756 7445 -15 3 815 277 263 35 76 chr13 30149961 30150106 -90134206 + B3A SINE B2 1 188 -28 3 815 590 276 56 75 chr13 30150700 30151006 -90133306 - MLT1B LTR MaLR -4 386 87 3 815 257 250 0 15 chr13 30151415 30151480 -90132832 - ID4_ SINE ID -6 77 14 3 815 314 221 221 0 chr13 30151752 30151874 -90132438 - B1F2 SINE Alu 0 149 1 3 815 1463 58 5 50 chr13 30152040 30152240 -90132072 + B2_Mm1a SINE B2 1 191 -2 3 815 303 337 0 21 chr13 30152296 30152393 -90131919 + (CGTG)n Simple_repeat Simple_repeat 1 95 0 3 815 397 243 84 0 chr13 30153655 30153762 -90130550 - B1_Mur1 SINE Alu 0 149 34 3 815 668 269 13 6 chr13 30153755 30153912 -90130400 - B3A SINE B2 -38 160 3 3 815 186 43 0 0 chr13 30153973 30153996 -90130316 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 3 815 253 213 180 0 chr13 30154740 30154801 -90129511 - ID4_ SINE ID -9 74 3 3 815 272 350 0 10 chr13 30155447 30155545 -90128767 + B4A SINE B4 2 98 -194 3 815 1687 220 63 3 chr13 30155551 30155929 -90128383 - MTD LTR MaLR -2 417 17 3 815 387 232 102 123 chr13 30155952 30156139 -90128173 + B4A SINE B4 109 291 -1 3 815 340 176 109 58 chr13 30156941 30157084 -90127228 + Lx8 LINE L1 7358 7473 0 3 815 433 283 0 26 chr13 30157163 30157279 -90127033 - PB1D10 SINE Alu 0 117 5 3 815 294 50 0 0 chr13 30157307 30157347 -90126965 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 815 841 297 7 35 chr13 30157385 30157671 -90126641 - B4 SINE B4 -14 278 1 3 815 728 256 126 0 chr13 30157690 30157881 -90126431 - ID_B1 SINE B4 -8 216 2 3 815 258 32 0 0 chr13 30160077 30160108 -90124204 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 815 368 287 151 63 chr13 30160600 30160838 -90123474 + B4A SINE B4 3 261 -31 3 815 2445 134 26 46 chr13 30161068 30161529 -90122783 - RLTR11B LTR ERVK -1 452 1 3 815 195 265 0 20 chr13 30162149 30162199 -90122113 + MIR3 SINE MIR 111 159 -49 3 815 1005 122 0 0 chr13 30162201 30162357 -90121955 + (TTCC)n Simple_repeat Simple_repeat 2 157 0 3 815 233 119 24 0 chr13 30162431 30162473 -90121839 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 815 352 301 3 1 chr13 30162478 30162575 -90121737 - PB1D10 SINE Alu -5 115 17 3 815 198 0 0 0 chr13 30162590 30162612 -90121700 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 815 665 272 52 9 chr13 30162753 30162983 -90121329 - L1MB3 LINE L1 -1 6182 5943 3 815 318 106 0 0 chr13 30163079 30163126 -90121186 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 815 236 244 81 11 chr13 30163165 30163252 -90121060 - U6 snRNA snRNA -4 103 11 3 815 433 293 82 43 chr13 30163260 30163492 -90120820 - L1MB3 LINE L1 -293 5890 5650 3 815 261 192 143 52 chr13 30163523 30163600 -90120712 - PB1D10 SINE Alu -11 106 23 3 815 185 240 40 0 chr13 30163706 30163756 -90120556 + L2 LINE L2 2837 2888 -531 3 815 626 236 18 57 chr13 30163786 30164015 -90120297 + L1MA6 LINE L1 5110 5329 -814 3 815 504 48 0 0 chr13 30164121 30164184 -90120128 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 3 815 884 255 72 25 chr13 30164230 30164508 -90119804 + L1MA6 LINE L1 5426 5716 -584 3 815 1435 145 9 0 chr13 30164568 30164789 -90119523 - URR1B DNA MER1_type -2 223 1 3 815 1888 177 103 105 chr13 30164789 30165304 -90119008 - MT2A LTR ERVL -16 517 3 3 815 1458 235 85 31 chr13 30165320 30165803 -90118509 + RLTR11A2 LTR ERVK 19 527 0 3 815 788 274 40 9 chr13 30165812 30166040 -90118272 + L1MA6 LINE L1 5768 6002 -298 3 815 749 269 50 4 chr13 30166759 30167020 -90117292 + L1MA6 LINE L1 6028 6300 0 3 815 373 216 0 39 chr13 30167116 30167246 -90117066 + CT-rich Low_complexity Low_complexity 3 127 0 3 815 445 276 0 0 chr13 30167269 30167374 -90116938 - PB1D7 SINE Alu -15 105 1 3 815 689 268 129 0 chr13 30167755 30167949 -90116363 + ID_B1 SINE B4 1 219 -5 3 815 970 246 86 11 chr13 30167956 30168223 -90116089 + B4A SINE B4 2 288 -4 3 815 636 235 15 0 chr13 30168656 30168792 -90115520 - B1_Mur1 SINE Alu -6 143 6 3 815 686 100 0 26 chr13 30169064 30169177 -90115135 + B1_Mur4 SINE Alu 41 150 0 3 815 440 221 44 96 chr13 30169189 30169324 -90114988 + B3A SINE B2 41 168 -30 3 815 405 0 0 0 chr13 30169325 30169370 -90114942 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 815 21 36 0 0 chr13 30169370 30169398 -90114914 + AT_rich Low_complexity Low_complexity 1 28 0 3 815 333 206 80 30 chr13 30169460 30169560 -90114752 - L1M5 LINE L1 -311 5813 5709 3 815 555 238 0 0 chr13 30169692 30169916 -90114396 + (TTG)n Simple_repeat Simple_repeat 1 224 0 3 815 601 260 93 7 chr13 30170444 30170595 -90113717 - RSINE1 SINE B4 0 165 2 3 815 298 279 78 14 chr13 30170614 30170756 -90113556 - L1MB5 LINE L1 -119 6055 5905 3 815 216 0 0 0 chr13 30171319 30171343 -90112969 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 815 242 250 0 0 chr13 30172430 30172490 -90111822 + ID SINE ID 1 60 -164 3 815 1851 161 61 21 chr13 30172513 30172937 -90111375 - RMER10A LTR ERVL -1 441 1 3 815 213 39 0 0 chr13 30173479 30173505 -90110807 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 815 453 206 0 0 chr13 30173630 30173727 -90110585 + CT-rich Low_complexity Low_complexity 2 98 0 3 815 1209 140 120 0 chr13 30173741 30173941 -90110371 - URR1B DNA MER1_type -1 224 1 3 815 487 305 23 0 chr13 30173941 30174069 -90110243 - ID_B1 SINE B4 -13 211 81 3 815 277 192 84 52 chr13 30174183 30174337 -90109975 + L1ME1 LINE L1 5203 5361 -785 3 815 283 324 0 36 chr13 30174337 30174353 -90109959 - ID_B1 SINE B4 -30 194 87 3 815 455 271 0 0 chr13 30174353 30174449 -90109863 - B1_Mus2 SINE Alu -46 101 6 3 815 229 231 104 30 chr13 30174453 30174520 -90109792 + ID4 SINE ID 6 77 -6 3 815 1267 249 100 48 chr13 30174669 30175170 -90109142 + L1ME1 LINE L1 5567 6093 -86 3 815 417 86 0 0 chr13 30175185 30175243 -90109069 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 815 191 232 180 10 chr13 30176093 30176193 -90108119 + L2c LINE L2 3257 3373 -14 3 815 187 239 59 89 chr13 30176278 30176379 -90107933 - MIR SINE MIR -91 171 74 3 815 239 0 0 31 chr13 30177429 30177461 -90106851 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 815 252 224 212 50 chr13 30177509 30177589 -90106723 + PB1D9 SINE Alu 5 97 -23 3 815 1054 135 0 0 chr13 30177710 30177880 -90106432 + URR1A DNA MER1_type 57 226 0 3 815 358 146 41 10 chr13 30178068 30178165 -90106147 + (TA)n Simple_repeat Simple_repeat 1 100 0 3 815 1248 258 104 27 chr13 30178168 30178374 -90105938 - Lx8 LINE L1 0 7473 7243 3 815 2333 160 14 34 chr13 30178374 30178789 -90105523 - MTB_Mm LTR MaLR 0 407 1 3 815 1248 258 104 27 chr13 30178789 30179093 -90105219 - Lx8 LINE L1 -231 7242 6924 3 815 1663 153 174 3 chr13 30179191 30179519 -90104793 + ORR1C2 LTR MaLR 1 384 0 3 815 262 260 93 37 chr13 30179830 30179938 -90104374 - L1MEe LINE L1 -3697 1157 1044 3 815 412 313 84 10 chr13 30179986 30180189 -90104123 + MER46C DNA MER2_type 1 218 -120 4 815 299 252 73 18 chr13 30180397 30180506 -90103806 - PB1D7 SINE Alu -5 115 1 4 815 234 0 0 0 chr13 30180587 30180613 -90103699 + (T)n Simple_repeat Simple_repeat 1 26 0 4 815 355 278 89 14 chr13 30180823 30180969 -90103343 + RSINE1 SINE B4 3 159 -6 4 815 1765 177 86 18 chr13 30180982 30181367 -90102945 + MTC LTR MaLR 8 418 -3 4 815 669 64 0 52 chr13 30181627 30181742 -90102570 + (CCCCCT)n Simple_repeat Simple_repeat 6 114 0 4 815 324 223 281 18 chr13 30181745 30181859 -90102453 - B1F1 SINE Alu 0 149 6 4 815 360 304 78 16 chr13 30181863 30182107 -90102205 - L1M4 LINE L1 -1703 4443 4179 4 815 1241 156 97 5 chr13 30182120 30182492 -90101820 + RLTR20B2 LTR ERVK 1 452 -108 4 815 342 0 0 0 chr13 30182492 30182530 -90101782 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 815 279 0 0 0 chr13 30182531 30182562 -90101750 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 815 1241 192 129 3 chr13 30182562 30182643 -90101669 + RLTR20B2 LTR ERVK 453 544 -16 4 815 1143 119 0 0 chr13 30182656 30182832 -90101480 + (TTCTC)n Simple_repeat Simple_repeat 5 180 0 4 815 213 39 0 0 chr13 30182832 30182858 -90101454 + (TCCCC)n Simple_repeat Simple_repeat 4 29 0 4 815 429 300 165 6 chr13 30182871 30183193 -90101119 - L1M4 LINE L1 -1979 4167 3795 4 815 338 279 14 85 chr13 30183197 30183338 -90100974 - ORR1E LTR MaLR 0 379 249 4 815 454 312 7 7 chr13 30183333 30183472 -90100840 - ORR1E LTR MaLR -214 145 7 4 815 947 251 121 65 chr13 30183507 30184060 -90100252 - L1M4 LINE L1 -2385 3761 3178 4 815 270 0 0 0 chr13 30184100 30184130 -90100182 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 815 728 186 0 22 chr13 30184130 30184311 -90100001 + G-rich Low_complexity Low_complexity 1 177 0 4 815 467 254 189 52 chr13 30184321 30184570 -90099742 - B4 SINE B4 -8 284 2 4 815 773 246 39 11 chr13 30184571 30184854 -90099458 - L1M4 LINE L1 -2961 3185 2895 4 815 634 271 15 18 chr13 30185038 30185230 -90099082 - B3A SINE B2 -8 185 3 4 815 1184 141 97 5 chr13 30185237 30185444 -90098868 - URR1A DNA MER1_type 0 226 1 4 815 186 103 0 0 chr13 30185666 30185695 -90098617 + (CTCTG)n Simple_repeat Simple_repeat 5 33 0 4 815 231 234 0 0 chr13 30185744 30185821 -90098491 + (CTCTG)n Simple_repeat Simple_repeat 2 78 0 4 815 703 184 88 0 chr13 30185956 30186092 -90098220 + B1_Mur3 SINE Alu 2 149 0 4 815 330 167 0 0 chr13 30186092 30186152 -90098160 + A-rich Low_complexity Low_complexity 1 60 0 4 815 256 254 0 17 chr13 30186186 30186246 -90098066 + GA-rich Low_complexity Low_complexity 3 61 0 4 815 555 274 36 36 chr13 30186441 30186634 -90097678 - B3A SINE B2 0 198 6 4 815 218 333 0 0 chr13 30186801 30186876 -90097436 + L2a LINE L2 2771 2845 -574 4 815 256 250 28 0 chr13 30186886 30186958 -90097354 + ID4_ SINE ID 3 76 -7 4 815 270 0 0 0 chr13 30187206 30187236 -90097076 + (A)n Simple_repeat Simple_repeat 1 30 0 4 815 184 315 55 20 chr13 30187359 30187505 -90096807 + L2a LINE L2 3152 3302 -124 4 815 1275 81 10 36 chr13 30188265 30188457 -90095855 + B2_Mm1a SINE B2 2 188 -5 4 815 592 265 16 57 chr13 30189125 30189317 -90094995 - B3A SINE B2 -11 187 4 4 815 281 351 8 0 chr13 30189394 30189528 -90094784 + CT-rich Low_complexity Low_complexity 2 136 0 4 815 193 49 0 89 chr13 30189678 30189723 -90094589 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 4 815 588 178 8 3 chr13 30189930 30190039 -90094273 - B1_Mus2 SINE Alu -36 113 1 4 815 828 296 43 84 chr13 30190277 30190646 -90093666 - ORR1E LTR MaLR -5 354 1 4 815 1216 54 0 0 chr13 30190649 30190796 -90093516 + B1_Mm SINE Alu 1 147 0 4 815 180 135 0 0 chr13 30190796 30190833 -90093479 + (A)n Simple_repeat Simple_repeat 1 37 0 4 815 390 57 0 0 chr13 30190890 30190943 -90093369 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 4 815 378 0 0 0 chr13 30190945 30190987 -90093325 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 815 258 56 0 0 chr13 30191563 30191599 -90092713 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4 815 1176 254 105 13 chr13 30191599 30191931 -90092381 + Lx8 LINE L1 6984 7352 -121 4 815 397 302 17 0 chr13 30191931 30192047 -90092265 + PB1D9 SINE Alu 3 120 0 4 815 1176 254 105 13 chr13 30192047 30192161 -90092151 + Lx8 LINE L1 7353 7471 -2 4 815 817 138 7 7 chr13 30192201 30192340 -90091972 + B1_Mm SINE Alu 9 147 0 4 815 305 24 24 0 chr13 30192383 30192425 -90091887 + (CAAAC)n Simple_repeat Simple_repeat 3 45 0 4 815 224 250 15 15 chr13 30192752 30192817 -90091495 - MIRm SINE MIR -1 275 211 4 815 1976 194 132 19 chr13 30192908 30193387 -90090925 + MT2A LTR ERVL 1 533 0 4 815 191 147 0 0 chr13 30193428 30193462 -90090850 - L2a LINE L2 -18 3408 3375 4 815 3060 138 8 8 chr13 30193463 30193982 -90090330 + RLTR12B LTR ERVK 1 519 -9 4 815 335 152 0 0 chr13 30194018 30194077 -90090235 - ORR1C2 LTR MaLR 0 384 326 4 815 2049 143 60 30 chr13 30194083 30194450 -90089862 - ORR1C1 LTR MaLR 0 378 1 4 815 323 300 40 0 chr13 30194543 30194643 -90089669 + RSINE1 SINE B4 2 105 -60 4 815 387 92 0 0 chr13 30194653 30194718 -90089594 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 815 616 295 179 0 chr13 30194770 30194994 -90089318 + B4 SINE B4 23 286 -6 4 815 396 59 0 0 chr13 30195001 30195052 -90089260 + (CATA)n Simple_repeat Simple_repeat 4 54 0 4 815 540 311 50 57 chr13 30195627 30195910 -90088402 + B4A SINE B4 2 282 -10 4 815 396 0 0 0 chr13 30195944 30195988 -90088324 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 815 234 0 0 0 chr13 30195988 30196013 -90088299 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 815 323 184 11 0 chr13 30196222 30196309 -90088003 + (TG)n Simple_repeat Simple_repeat 1 88 0 4 815 238 236 18 0 chr13 30196344 30196399 -90087913 - B3A SINE B2 -142 56 1 4 815 228 250 28 42 chr13 30196788 30196859 -90087453 - ID4 SINE ID -8 75 6 4 815 2271 119 90 14 chr13 30197368 30197734 -90086578 + ORR1B1 LTR MaLR 1 394 0 4 815 955 237 9 0 chr13 30197947 30198166 -90086146 - ID_B1 SINE B4 0 224 4 4 815 21 36 0 0 chr13 30198564 30198592 -90085720 + AT_rich Low_complexity Low_complexity 1 28 0 4 815 258 230 0 0 chr13 30199003 30199116 -90085196 + CT-rich Low_complexity Low_complexity 1 113 0 4 815 545 165 9 52 chr13 30199121 30199236 -90085076 + ORR1C2 LTR MaLR 1 110 -274 4 815 955 183 46 3 chr13 30199233 30199523 -90084789 - ORR1B1 LTR MaLR -8 386 1 4 815 997 164 172 9 chr13 30199523 30199750 -90084562 + ORR1C2 LTR MaLR 118 381 -3 4 815 853 277 5 24 chr13 30199763 30199970 -90084342 - ID_B1 SINE B4 0 224 22 4 815 656 149 16 0 chr13 30200835 30200956 -90083356 + (TCCA)n Simple_repeat Simple_repeat 3 125 0 4 815 202 188 0 0 chr13 30201213 30201245 -90083067 + C-rich Low_complexity Low_complexity 2 33 0 4 815 28 0 0 0 chr13 30201563 30201591 -90082721 + AT_rich Low_complexity Low_complexity 1 28 0 4 815 224 77 26 0 chr13 30201595 30201634 -90082678 + (TA)n Simple_repeat Simple_repeat 1 40 0 4 815 304 175 17 34 chr13 30201691 30201750 -90082562 + PB1D9 SINE Alu 2 59 -61 4 815 1006 159 0 12 chr13 30201750 30201915 -90082397 + (CAGAGA)n Simple_repeat Simple_repeat 5 167 0 4 815 284 243 14 0 chr13 30201916 30201986 -90082326 + B1_Mur1 SINE Alu 39 109 -40 4 815 604 244 133 68 chr13 30201989 30202234 -90082078 + L1_Rod LINE L1 5600 5924 -232 4 815 1388 217 142 28 chr13 30202235 30202741 -90081571 + Lx7 LINE L1 6028 6591 -1105 4 815 3005 183 55 13 chr13 30202739 30203336 -90080976 - Lx7 LINE L1 -521 7175 6318 4 815 327 247 132 48 chr13 30203415 30203581 -90080731 + Lx8 LINE L1 7293 7472 -1 4 815 698 241 144 14 chr13 30203974 30204252 -90080060 - L1MA7 LINE L1 -62 6229 5916 4 815 1170 41 0 14 chr13 30204559 30204706 -90079606 - B1_Mm SINE Alu -1 146 2 4 815 755 278 112 35 chr13 30204707 30205020 -90079292 - Lx8 LINE L1 -239 7234 6898 4 815 1769 282 56 61 chr13 30205122 30205583 -90078729 - L1MA7 LINE L1 -847 5444 4978 4 815 543 264 35 7 chr13 30205583 30205724 -90078588 - B1_Mur2 SINE Alu -4 145 1 4 815 1769 286 70 68 chr13 30205724 30206347 -90077965 - L1MA7 LINE L1 -1163 4977 4352 4 815 1120 95 0 0 chr13 30206355 30206502 -90077810 - B1_Mus1 SINE Alu 0 148 2 4 815 189 0 0 0 chr13 30206627 30206648 -90077664 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 815 390 121 73 141 chr13 30206684 30206876 -90077436 - RMER17C LTR ERVK -135 275 97 4 815 396 0 0 0 chr13 30206974 30207018 -90077294 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 815 226 292 10 24 chr13 30207176 30207383 -90076929 + CT-rich Low_complexity Low_complexity 1 204 0 4 815 203 203 14 0 chr13 30207546 30207615 -90076697 + (TA)n Simple_repeat Simple_repeat 2 71 0 4 815 528 239 0 47 chr13 30207738 30207887 -90076425 + B3A SINE B2 54 195 -3 4 815 575 325 0 25 chr13 30207971 30208132 -90076180 - RSINE1 SINE B4 -8 157 1 4 815 39653 42 7 1 chr13 30208760 30215078 -90069234 - L1Md_T LINE L1 0 6582 286 4 815 435 287 106 24 chr13 30215694 30216009 -90068303 - ORR1E LTR MaLR -12 367 6 4 815 431 247 82 51 chr13 30216117 30216275 -90068037 + RSINE1 SINE B4 3 165 0 4 815 280 265 0 0 chr13 30216961 30217029 -90067283 + MLT1K LTR MaLR 209 276 -319 4 815 328 228 44 89 chr13 30217059 30217194 -90067118 + MTD LTR MaLR 6 134 -245 4 815 369 261 92 28 chr13 30217338 30217480 -90066832 + MTD LTR MaLR 269 419 0 4 815 259 290 14 14 chr13 30217626 30217696 -90066616 - RSINE1 SINE B4 -85 80 11 4 815 1242 242 82 3 chr13 30217703 30218034 -90066278 - MTEa LTR MaLR -20 359 3 4 815 1317 270 55 3 chr13 30218574 30218920 -90065392 + MTEa LTR MaLR 5 368 -11 4 815 256 247 24 94 chr13 30218922 30219007 -90065305 + MTE2b LTR MaLR 169 247 -132 4 815 972 284 67 53 chr13 30219168 30219618 -90064694 + RMER5 LTR ERV1 49 504 -30 4 815 540 287 15 0 chr13 30219847 30219983 -90064329 + B1_Mur1 SINE Alu 2 139 -10 4 815 324 0 0 0 chr13 30219983 30220019 -90064293 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 815 920 83 0 0 chr13 30220230 30220362 -90063950 + B2_Mm2 SINE B2 27 158 -37 5 815 252 0 0 0 chr13 30220363 30220391 -90063921 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 5 815 402 248 0 38 chr13 30220937 30221042 -90063270 + PB1D10 SINE Alu 2 102 -15 5 815 191 0 0 94 chr13 30221058 30221090 -90063222 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 815 23 68 0 0 chr13 30221228 30221272 -90063040 + AT_rich Low_complexity Low_complexity 1 44 0 5 815 1200 191 10 0 chr13 30221738 30221937 -90062375 + B3 SINE B2 2 202 -14 5 815 780 11 0 0 chr13 30222075 30222164 -90062148 + (TG)n Simple_repeat Simple_repeat 1 89 0 5 815 753 219 239 41 chr13 30222182 30222425 -90061887 - B4 SINE B4 0 292 2 5 815 670 116 0 40 chr13 30222428 30222554 -90061758 + C-rich Low_complexity Low_complexity 5 125 0 5 815 1208 57 11 17 chr13 30222557 30222737 -90061575 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 5 815 365 296 9 9 chr13 30222740 30222849 -90061463 - PB1D10 SINE Alu -7 110 2 5 815 2065 109 63 89 chr13 30223044 30223551 -90060761 - RLTR1B LTR ERV1 0 512 1 5 815 183 42 0 0 chr13 30224253 30224277 -90060035 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 5 815 340 218 11 33 chr13 30224556 30224646 -90059666 - PB1D10 SINE Alu -18 99 12 5 815 609 235 31 50 chr13 30224842 30225003 -90059309 - B3A SINE B2 -38 160 3 5 815 228 318 33 33 chr13 30225128 30225219 -90059093 - PB1 SINE Alu -16 111 21 5 815 200 152 43 0 chr13 30225394 30225440 -90058872 + (TATG)n Simple_repeat Simple_repeat 3 50 0 5 815 181 30 0 83 chr13 30225887 30225923 -90058389 + (TTA)n Simple_repeat Simple_repeat 3 35 0 5 815 1081 85 7 0 chr13 30225926 30226079 -90058233 - B2_Mm1t SINE B2 -38 155 2 5 815 497 247 53 94 chr13 30226853 30227023 -90057289 + B3A SINE B2 1 163 -35 5 815 315 0 0 0 chr13 30227024 30227059 -90057253 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 815 234 0 0 0 chr13 30227059 30227084 -90057228 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 815 598 244 119 0 chr13 30227482 30227650 -90056662 + B3A SINE B2 1 188 -10 5 815 990 12 71 0 chr13 30227657 30227825 -90056487 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 815 212 119 85 0 chr13 30227825 30227884 -90056428 + GA-rich Low_complexity Low_complexity 2 65 0 5 815 212 195 346 49 chr13 30227975 30228056 -90056256 + PB1D7 SINE Alu 15 119 -1 5 815 231 268 14 0 chr13 30228964 30229035 -90055277 + B1_Mur3 SINE Alu 1 72 -77 5 815 295 159 116 0 chr13 30229165 30229234 -90055078 - B1_Mur4 SINE Alu -6 144 68 5 815 250 253 38 12 chr13 30229202 30229282 -90055030 - B1F SINE Alu -22 127 46 5 815 461 281 13 20 chr13 30229726 30229875 -90054437 + B1F SINE Alu 2 149 0 5 815 371 236 37 35 chr13 30230520 30230633 -90053679 - B3A SINE B2 -13 203 93 5 815 1299 143 47 58 chr13 30230984 30231259 -90053053 + Lx4A LINE L1 6787 7058 0 5 815 510 250 100 35 chr13 30231367 30231537 -90052775 + B3A SINE B2 1 181 -17 5 815 543 16 0 0 chr13 30231552 30231616 -90052696 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 815 977 204 19 33 chr13 30232183 30232396 -90051916 + B3 SINE B2 1 210 -6 5 815 231 325 39 31 chr13 30232646 30232773 -90051539 - L2c LINE L2 -8 3379 3252 5 815 349 313 20 0 chr13 30233654 30233753 -90050559 + PB1D7 SINE Alu 1 101 -19 5 815 269 232 183 0 chr13 30233892 30233974 -90050338 - ORR1E LTR MaLR -19 360 264 5 815 503 301 51 92 chr13 30234138 30234420 -90049892 - ORR1E LTR MaLR -111 263 1 5 815 688 303 75 26 chr13 30234768 30235036 -90049276 + B4 SINE B4 1 281 -11 5 815 243 0 0 0 chr13 30235070 30235097 -90049215 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 815 263 172 0 65 chr13 30235652 30235714 -90048598 + PB1D9 SINE Alu 2 59 -61 5 815 857 163 0 11 chr13 30235716 30235890 -90048422 + (CAGAGA)n Simple_repeat Simple_repeat 1 172 0 5 815 495 198 11 21 chr13 30235892 30235985 -90048327 + B1_Mm SINE Alu 39 130 -17 5 815 492 18 0 0 chr13 30236238 30236295 -90048017 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 815 240 157 18 89 chr13 30236960 30237016 -90047296 + RSINE1 SINE B4 1 52 -113 5 815 311 145 0 14 chr13 30237025 30237095 -90047217 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 815 195 69 0 0 chr13 30237228 30237257 -90047055 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 5 815 289 271 29 0 chr13 30237289 30237359 -90046953 - ID SINE ID -151 73 2 5 815 1068 111 0 0 chr13 30237433 30237613 -90046699 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 815 315 0 0 0 chr13 30237846 30237881 -90046431 + (T)n Simple_repeat Simple_repeat 1 35 0 5 815 39 50 0 0 chr13 30239053 30239113 -90045199 + AT_rich Low_complexity Low_complexity 1 60 0 5 815 573 231 7 14 chr13 30239218 30239363 -90044949 + B1F SINE Alu 6 149 0 5 815 768 216 68 28 chr13 30240071 30240247 -90044065 - U2 snRNA snRNA -2 186 4 5 815 879 264 13 22 chr13 30240827 30241052 -90043260 - ID_B1 SINE B4 0 224 2 5 815 547 194 28 9 chr13 30242501 30242610 -90041702 - RSINE1 SINE B4 -52 113 3 5 815 573 297 44 69 chr13 30242669 30242987 -90041325 + L1MC3 LINE L1 6555 6864 -921 5 815 207 0 0 0 chr13 30242987 30243010 -90041302 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 5 815 265 277 35 24 chr13 30243511 30243596 -90040716 + L1MC3 LINE L1 7321 7406 -379 5 815 421 264 37 37 chr13 30243608 30243742 -90040570 - ID_B1 SINE B4 -4 220 87 5 815 320 308 75 16 chr13 30243791 30243979 -90040333 + L1MA6 LINE L1 6102 6300 0 5 815 516 238 90 18 chr13 30244422 30244589 -90039723 + L1MC3 LINE L1 7441 7619 -166 5 815 268 157 28 14 chr13 30244682 30244753 -90039559 + CT-rich Low_complexity Low_complexity 2 73 0 5 815 240 164 45 0 chr13 30244764 30244831 -90039481 + (CCTA)n Simple_repeat Simple_repeat 2 71 0 5 815 252 342 70 45 chr13 30245251 30245407 -90038905 - ORR1E LTR MaLR -162 197 38 5 815 195 220 0 0 chr13 30245468 30245518 -90038794 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 815 318 262 9 45 chr13 30245913 30246025 -90038287 + CT-rich Low_complexity Low_complexity 3 110 0 5 815 302 194 90 0 chr13 30246038 30246105 -90038207 - ID4 SINE ID -10 73 1 5 815 554 286 58 7 chr13 30246915 30247070 -90037242 - B3A SINE B2 -34 164 2 5 815 392 202 12 12 chr13 30247521 30247601 -90036711 - ID4 SINE ID -2 81 2 5 815 357 309 36 7 chr13 30248203 30248343 -90035969 - B1F SINE Alu 0 149 6 5 815 231 36 0 0 chr13 30248655 30248683 -90035629 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 5 815 1113 108 0 0 chr13 30248684 30248842 -90035470 - B2_Mm2 SINE B2 -37 158 1 5 815 551 253 33 7 chr13 30250250 30250401 -90033911 - ID_B1 SINE B4 0 224 70 5 815 449 84 14 0 chr13 30250588 30250659 -90033653 + (TG)n Simple_repeat Simple_repeat 1 72 0 5 815 692 270 0 0 chr13 30250659 30250811 -90033501 - B3A SINE B2 -45 153 2 5 815 463 224 78 31 chr13 30251222 30251340 -90032972 + B1_Mur1 SINE Alu 15 139 -10 5 815 231 36 0 0 chr13 30251340 30251368 -90032944 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 5 815 21 36 0 0 chr13 30252485 30252513 -90031799 + AT_rich Low_complexity Low_complexity 1 28 0 5 815 437 0 19 0 chr13 30252619 30252672 -90031640 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 5 815 646 167 60 15 chr13 30252672 30252806 -90031506 - B1_Mur3 SINE Alu -9 140 1 5 815 846 143 8 0 chr13 30252827 30252960 -90031352 - B3 SINE B2 -81 135 2 5 815 558 133 0 0 chr13 30253092 30253182 -90031130 + (TG)n Simple_repeat Simple_repeat 1 90 0 5 815 436 266 91 10 chr13 30253551 30253696 -90030616 + MLT1A1 LTR MaLR 242 408 0 5 815 249 108 0 0 chr13 30253757 30253794 -90030518 + (CAT)n Simple_repeat Simple_repeat 2 38 0 5 815 492 234 117 0 chr13 30253810 30253938 -90030374 - B1_Mur3 SINE Alu 0 149 7 5 815 1370 168 65 205 chr13 30254207 30254641 -90029671 - ORR1D1 LTR MaLR -1 373 1 5 815 289 224 15 0 chr13 30254939 30255006 -90029306 + B4A SINE B4 1 68 -224 5 815 1967 119 54 3 chr13 30255010 30255346 -90028966 - ORR1B1 LTR MaLR -8 386 34 5 815 391 239 0 22 chr13 30255336 30255426 -90028886 + B4A SINE B4 118 205 -87 5 815 210 105 0 0 chr13 30255855 30255893 -90028419 + (T)n Simple_repeat Simple_repeat 1 38 0 5 815 307 156 15 15 chr13 30256197 30256262 -90028050 - MTEa LTR MaLR 0 379 315 5 815 462 18 0 0 chr13 30256315 30256370 -90027942 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 815 462 152 13 19 chr13 30256386 30256540 -90027772 + (TCTCTG)n Simple_repeat Simple_repeat 6 158 0 5 815 806 236 18 74 chr13 30256613 30256842 -90027470 - MTEa LTR MaLR -161 218 3 5 815 571 273 83 5 chr13 30257605 30257791 -90026521 - B3A SINE B2 -7 209 8 5 815 231 152 0 0 chr13 30258015 30258061 -90026251 + C-rich Low_complexity Low_complexity 1 46 0 5 815 291 303 13 0 chr13 30258263 30258339 -90025973 - PB1D10 SINE Alu -38 79 3 5 815 594 259 7 7 chr13 30259079 30259215 -90025097 + RSINE1 SINE B4 1 136 -29 5 815 25 0 0 0 chr13 30259226 30259251 -90025061 + AT_rich Low_complexity Low_complexity 1 25 0 5 815 282 115 0 0 chr13 30259760 30259812 -90024500 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 815 259 304 76 62 chr13 30259812 30259850 -90024462 - RSINE1 SINE B4 0 165 128 5 815 951 89 0 32 chr13 30259850 30260036 -90024276 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 815 259 304 76 62 chr13 30260036 30260141 -90024171 - RSINE1 SINE B4 -38 127 21 5 815 279 300 0 0 chr13 30260842 30260942 -90023370 + (TTCTG)n Simple_repeat Simple_repeat 5 104 0 5 815 406 273 113 7 chr13 30261263 30261414 -90022898 - RMER15 LTR ERVL -6 569 403 5 815 465 226 81 76 chr13 30261444 30261616 -90022696 - RMER15 LTR ERVL -127 448 276 5 815 1132 128 5 5 chr13 30262588 30262776 -90021536 - B2_Mm2 SINE B2 -6 189 2 6 815 7377 104 41 6 chr13 30262800 30264196 -90020116 - Lx LINE L1 -6 6648 5212 6 815 423 0 0 0 chr13 30264214 30264261 -90020051 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 815 829 99 16 0 chr13 30264284 30264405 -90019907 - B2_Mm2 SINE B2 -71 124 2 6 815 402 230 44 0 chr13 30264505 30264556 -90019756 - B3 SINE B2 0 216 165 6 815 414 0 0 0 chr13 30264556 30264602 -90019710 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 815 402 230 44 0 chr13 30264602 30264663 -90019649 - B3 SINE B2 -52 164 100 6 815 818 198 171 5 chr13 30264953 30265146 -90019166 + URR1B DNA MER1_type 1 225 0 6 815 444 231 55 18 chr13 30265634 30265744 -90018568 + PB1D10 SINE Alu 3 116 -1 6 815 195 42 0 0 chr13 30266651 30266675 -90017637 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 815 261 0 0 0 chr13 30266696 30266725 -90017587 + (GA)n Simple_repeat Simple_repeat 2 30 0 6 815 469 219 2 2 chr13 30267301 30267391 -90016921 - RSINE1 SINE B4 -203 89 1 6 815 826 282 54 84 chr13 30269066 30269457 -90014855 - MTEa LTR MaLR 0 379 1 6 815 201 94 0 0 chr13 30269928 30269960 -90014352 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 815 198 71 0 0 chr13 30269978 30270006 -90014306 + (TATATG)n Simple_repeat Simple_repeat 5 32 0 6 815 255 157 0 136 chr13 30270010 30270069 -90014243 - B4A SINE B4 0 292 242 6 815 544 253 7 20 chr13 30270296 30270445 -90013867 + B4A SINE B4 2 148 -144 6 815 22 0 0 0 chr13 30270941 30270963 -90013349 + AT_rich Low_complexity Low_complexity 1 22 0 6 815 438 20 0 0 chr13 30270996 30271047 -90013265 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 815 515 273 47 0 chr13 30271050 30271178 -90013134 - RSINE1 SINE B4 -29 136 3 6 815 34 0 0 0 chr13 30271213 30271247 -90013065 + AT_rich Low_complexity Low_complexity 1 34 0 6 815 11538 70 34 4 chr13 30271390 30273563 -90010749 + L1VL4 LINE L1 182 2434 -1125 6 815 1027 149 0 0 chr13 30274118 30274266 -90010046 - B1_Mur4 SINE Alu 0 150 3 6 815 228 246 15 15 chr13 30274493 30274559 -90009753 + (CATA)n Simple_repeat Simple_repeat 3 68 0 6 815 405 0 0 0 chr13 30274621 30274666 -90009646 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 815 233 264 126 0 chr13 30275363 30275450 -90008862 + MIR SINE MIR 49 146 -62 6 815 346 270 0 0 chr13 30275529 30275603 -90008709 - ID_B1 SINE B4 -4 220 147 6 815 288 264 26 52 chr13 30275633 30275749 -90008563 + MIR SINE MIR 22 134 -128 6 815 738 283 58 11 chr13 30276593 30276868 -90007444 + B4A SINE B4 3 290 -2 6 815 844 234 177 3 chr13 30277209 30277514 -90006798 + MLT1B LTR MaLR 28 385 -5 6 816 25226 18 1 0 chr13 30278864 30282451 -90001861 - L1Md_T LINE L1 -2 6580 2991 6 816 206 0 0 65 chr13 30282470 30282501 -90001811 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 6 816 225 262 49 0 chr13 30282917 30282978 -90001334 - MER31A LTR ERV1 -421 64 1 6 816 197 33 0 32 chr13 30283018 30283049 -90001263 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 6 816 422 333 7 29 chr13 30283049 30283188 -90001124 - B1F SINE Alu -13 136 1 6 816 348 346 30 15 chr13 30283282 30283417 -90000895 - MER5A DNA MER1_type -52 137 1 6 816 369 216 0 0 chr13 30283552 30283640 -90000672 + CT-rich Low_complexity Low_complexity 1 88 0 6 816 1344 110 0 10 chr13 30283684 30283877 -90000435 - B2_Mm2 SINE B2 -4 191 1 6 816 334 253 10 10 chr13 30283877 30283973 -90000339 - PB1D10 SINE Alu -13 104 9 6 816 320 148 16 0 chr13 30284287 30284348 -89999964 + CT-rich Low_complexity Low_complexity 2 63 0 6 816 463 217 16 50 chr13 30284728 30284849 -89999463 - ID_B1 SINE B4 -29 195 79 6 816 211 362 0 0 chr13 30284948 30285006 -89999306 - ID4 SINE ID -8 75 18 6 816 679 248 205 26 chr13 30285269 30285571 -89998741 - ORR1E LTR MaLR 0 359 4 6 816 830 156 60 0 chr13 30285702 30285869 -89998443 + URR1A DNA MER1_type 50 226 0 6 816 315 283 26 0 chr13 30285948 30285962 -89998350 - B3A SINE B2 0 198 185 6 816 561 30 0 0 chr13 30285962 30286029 -89998283 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 6 816 362 273 10 0 chr13 30286029 30286129 -89998183 - B3 SINE B2 -14 184 79 6 816 216 0 0 0 chr13 30287386 30287410 -89996902 + (T)n Simple_repeat Simple_repeat 1 24 0 6 816 474 294 8 0 chr13 30288499 30288618 -89995694 + B3A SINE B2 53 172 -26 6 816 692 285 0 20 chr13 30288649 30288846 -89995466 - B3A SINE B2 -5 193 1 6 816 231 319 30 50 chr13 30288865 30288964 -89995348 + L2a LINE L2 3327 3423 -3 6 816 685 214 14 0 chr13 30288993 30289133 -89995179 + B1_Mur2 SINE Alu 2 143 -6 6 816 636 150 0 0 chr13 30289149 30289262 -89995050 + GA-rich Low_complexity Low_complexity 2 114 0 6 816 258 217 0 0 chr13 30290000 30290046 -89994266 - Lx8 LINE L1 -254 7219 7174 6 816 705 265 55 61 chr13 30290622 30290658 -89993654 - B4A SINE B4 -1 291 269 6 816 222 62 0 0 chr13 30290658 30290690 -89993622 + (CATG)n Simple_repeat Simple_repeat 1 32 0 6 816 705 265 55 61 chr13 30290690 30290946 -89993366 - B4A SINE B4 -24 268 1 6 816 702 0 0 0 chr13 30292228 30292306 -89992006 + (TTCTC)n Simple_repeat Simple_repeat 2 79 0 6 816 267 215 0 0 chr13 30292308 30292373 -89991939 + CT-rich Low_complexity Low_complexity 3 67 0 6 816 236 284 0 39 chr13 30292452 30292529 -89991783 - BC1_Mm scRNA scRNA -60 92 19 6 816 632 204 0 108 chr13 30293047 30293195 -89991117 + B1_Mur1 SINE Alu 3 134 -15 6 816 414 0 0 0 chr13 30293199 30293245 -89991067 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 816 449 142 8 23 chr13 30293245 30293375 -89990937 + GA-rich Low_complexity Low_complexity 1 128 0 6 816 180 167 0 0 chr13 30293397 30293445 -89990867 + (CAGA)n Simple_repeat Simple_repeat 4 51 0 6 816 313 294 81 76 chr13 30293445 30293564 -89990748 - MT2A LTR ERVL -54 479 366 6 816 665 103 0 25 chr13 30293564 30293684 -89990628 - L1Md_F2 LINE L1 -3 6579 6463 6 816 313 294 81 76 chr13 30293684 30293774 -89990538 - MT2A LTR ERVL -168 365 269 6 816 913 183 30 0 chr13 30293833 30293997 -89990315 + B3 SINE B2 4 172 -44 6 816 2229 148 38 5 chr13 30294643 30295043 -89989269 - MTC LTR MaLR -8 413 1 6 816 702 58 10 0 chr13 30295055 30295158 -89989154 + ORR1A2 LTR MaLR 8 111 -216 6 816 744 155 24 15 chr13 30295153 30295336 -89988976 + ORR1A3-int LTR MaLR 416 604 -1188 6 816 239 254 0 16 chr13 30295291 30295355 -89988957 + MT2B LTR ERVL 157 219 -382 6 816 1090 126 0 34 chr13 30295373 30295605 -89988707 - ORR1A2 LTR MaLR -135 211 1 6 816 309 283 21 32 chr13 30295681 30295776 -89988536 - B3A SINE B2 -16 182 89 6 816 411 274 83 65 chr13 30296250 30296480 -89987832 + RMER2 LTR ERV1 334 567 0 6 816 918 248 21 107 chr13 30296483 30296772 -89987540 + B4 SINE B4 19 282 -10 6 816 393 22 0 0 chr13 30296785 30296831 -89987481 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 816 21 0 0 0 chr13 30297034 30297055 -89987257 + AT_rich Low_complexity Low_complexity 1 21 0 6 816 626 272 112 64 chr13 30297250 30297607 -89986705 + MTEa LTR MaLR 2 375 -4 6 816 26 0 0 0 chr13 30298140 30298166 -89986146 + AT_rich Low_complexity Low_complexity 1 26 0 6 816 6468 63 2 0 chr13 30298242 30299046 -89985266 + L1_Mus1 LINE L1 5762 6567 0 6 816 617 180 232 70 chr13 30299048 30299233 -89985079 + B3 SINE B2 2 216 0 6 816 1029 211 14 19 chr13 30299388 30299600 -89984712 + B3 SINE B2 3 213 -3 6 816 1251 197 0 84 chr13 30299685 30300040 -89984272 - Lx7 LINE L1 0 7696 7372 6 816 268 250 132 0 chr13 30300038 30300114 -89984198 - Lx7 LINE L1 -698 6998 6913 6 816 761 272 105 17 chr13 30300837 30301221 -89983091 - RLTR11A2 LTR ERVK -27 414 6 6 816 180 77 0 0 chr13 30301354 30301380 -89982932 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 816 264 236 0 0 chr13 30301382 30301437 -89982875 - MLT2B2 LTR ERVL -48 506 452 6 816 2348 168 2 7 chr13 30301507 30301922 -89982390 + MTC LTR MaLR 1 413 -8 6 816 410 330 55 11 chr13 30301928 30302109 -89982203 - MLT2B2 LTR ERVL -212 303 115 6 816 302 183 14 0 chr13 30302222 30302293 -89982019 + (TA)n Simple_repeat Simple_repeat 1 72 0 6 816 286 333 65 47 chr13 30302300 30302514 -89981798 + Tigger13a DNA MER2_type 264 481 -290 6 816 605 330 38 73 chr13 30302855 30303254 -89981058 + MLT1C LTR MaLR 83 467 0 6 816 996 92 0 0 chr13 30303765 30303906 -89980406 + (TTTC)n Simple_repeat Simple_repeat 2 142 0 6 816 735 120 43 43 chr13 30304101 30304240 -89980072 - B1_Mus1 SINE Alu -1 147 9 6 816 441 0 0 0 chr13 30304252 30304301 -89980011 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 6 816 304 257 186 62 chr13 30304498 30304643 -89979669 - RSINE1 SINE B4 0 165 3 6 816 526 229 0 0 chr13 30305676 30305785 -89978527 + PB1D7 SINE Alu 1 109 -11 6 816 1149 72 0 0 chr13 30306461 30306670 -89977642 + (TG)n Simple_repeat Simple_repeat 1 209 0 6 816 226 263 18 0 chr13 30307846 30307903 -89976409 + (TATG)n Simple_repeat Simple_repeat 1 58 0 6 816 653 313 52 15 chr13 30307931 30308200 -89976112 - B4A SINE B4 -12 280 2 6 816 416 200 0 9 chr13 30308340 30308451 -89975861 + CT-rich Low_complexity Low_complexity 3 112 0 6 816 382 253 65 2 chr13 30308720 30308857 -89975455 + B1F SINE Alu 1 143 -6 6 816 272 290 29 0 chr13 30308857 30308926 -89975386 + ID4_ SINE ID 2 72 -11 6 816 681 280 21 47 chr13 30309794 30309985 -89974327 - MTEa LTR MaLR -192 187 2 6 816 518 268 77 70 chr13 30309989 30310169 -89974143 - L1M4 LINE L1 -632 5546 5353 6 816 248 70 23 0 chr13 30310169 30310212 -89974100 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 816 518 268 77 70 chr13 30310212 30310316 -89973996 - L1M4 LINE L1 -826 5352 5261 6 816 264 228 0 0 chr13 30310344 30310401 -89973911 - PB1D10 SINE Alu -14 103 47 7 816 231 370 0 0 chr13 30310507 30310599 -89973713 + Lx8 LINE L1 7034 7125 -348 7 816 396 280 56 31 chr13 30310741 30310903 -89973409 + RMER15 LTR ERVL 405 570 -5 7 816 354 290 54 158 chr13 30312530 30312751 -89971561 - RMER30 DNA MER1_type 0 202 5 7 816 669 161 0 0 chr13 30312866 30313034 -89971278 + CT-rich Low_complexity Low_complexity 1 168 0 7 816 351 0 0 0 chr13 30313034 30313073 -89971239 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 816 279 133 0 0 chr13 30313143 30313188 -89971124 + (TCC)n Simple_repeat Simple_repeat 3 47 0 7 816 346 272 29 0 chr13 30313361 30313464 -89970848 - PB1D10 SINE Alu -5 112 7 7 816 309 259 33 11 chr13 30313399 30313489 -89970823 - ID_B1 SINE B4 -71 153 62 7 816 279 292 0 0 chr13 30313497 30313562 -89970750 + PB1D10 SINE Alu 53 117 0 7 816 723 252 42 28 chr13 30313610 30313826 -89970486 - MTE2b LTR MaLR -160 219 1 7 816 1181 139 124 0 chr13 30314353 30314554 -89969758 - URR1A DNA MER1_type 0 226 1 7 816 1076 83 0 14 chr13 30315043 30315189 -89969123 + B1_Mus1 SINE Alu 2 145 -3 7 816 356 0 0 22 chr13 30315189 30315234 -89969078 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 7 816 662 182 25 0 chr13 30315249 30315408 -89968904 + GA-rich Low_complexity Low_complexity 2 164 0 7 816 399 215 0 12 chr13 30316546 30316626 -89967686 + ID4 SINE ID 4 82 -1 7 816 665 205 227 6 chr13 30316635 30316807 -89967505 + B3 SINE B2 1 210 -6 7 816 1446 75 11 0 chr13 30316807 30316995 -89967317 - B2_Mm1t SINE B2 -2 191 2 7 816 654 236 114 18 chr13 30317320 30317670 -89966642 - MTD LTR MaLR 0 419 8 7 816 260 27 27 0 chr13 30319280 30319317 -89964995 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 7 816 476 122 222 9 chr13 30319318 30319426 -89964886 - B1_Mur1 SINE Alu -13 136 6 7 816 216 214 0 0 chr13 30319849 30319905 -89964407 + (CGTG)n Simple_repeat Simple_repeat 4 59 0 7 816 489 281 95 40 chr13 30320325 30320651 -89963661 + MamRep434 DNA TcMar 5 348 -78 7 816 335 276 91 95 chr13 30321370 30321602 -89962710 + MTEa LTR MaLR 12 242 -137 7 816 432 0 0 0 chr13 30321603 30321651 -89962661 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 816 534 239 0 22 chr13 30322077 30322261 -89962051 + CT-rich Low_complexity Low_complexity 1 180 0 7 816 252 306 44 18 chr13 30322730 30322843 -89961469 - B1_Mus1 SINE Alu 0 148 33 7 816 1248 217 112 0 chr13 30323076 30323380 -89960932 + MTEb LTR MaLR 4 341 -38 7 816 205 138 0 0 chr13 30324077 30324106 -89960206 + (TCC)n Simple_repeat Simple_repeat 3 31 0 7 816 342 51 24 49 chr13 30324369 30324451 -89959861 + (TTTTG)n Simple_repeat Simple_repeat 1 80 0 7 816 285 258 11 33 chr13 30324949 30325219 -89959093 + CT-rich Low_complexity Low_complexity 1 263 0 7 816 1694 207 64 5 chr13 30326064 30326452 -89957860 - MTD LTR MaLR -8 411 1 7 816 582 54 21 31 chr13 30326664 30326760 -89957552 + (TCCC)n Simple_repeat Simple_repeat 3 97 0 7 816 235 274 16 0 chr13 30326798 30326860 -89957452 + C-rich Low_complexity Low_complexity 1 63 0 7 816 277 317 32 16 chr13 30327844 30327969 -89956343 - MIR SINE MIR -69 193 67 7 816 775 144 15 0 chr13 30328327 30328459 -89955853 + B1_Mur3 SINE Alu 9 142 -7 7 816 225 94 0 0 chr13 30328459 30328491 -89955821 + (TAA)n Simple_repeat Simple_repeat 2 33 0 7 816 246 32 0 0 chr13 30329005 30329036 -89955276 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 7 816 1073 60 17 29 chr13 30329036 30329207 -89955105 + (GAAAA)n Simple_repeat Simple_repeat 3 172 0 7 816 567 29 0 0 chr13 30330002 30330071 -89954241 + (TG)n Simple_repeat Simple_repeat 1 69 0 7 816 676 251 32 59 chr13 30330753 30330973 -89953339 - B4 SINE B4 0 292 79 7 816 23 33 0 0 chr13 30331235 30331265 -89953047 + AT_rich Low_complexity Low_complexity 1 30 0 7 816 555 288 18 59 chr13 30331860 30332030 -89952282 - ID_B1 SINE B4 -53 171 9 7 816 1595 131 136 13 chr13 30332035 30332337 -89951975 - ORR1B1 LTR MaLR -9 385 47 7 816 213 254 62 16 chr13 30332419 30332483 -89951829 + MIRb SINE MIR 194 260 -8 7 816 311 210 0 61 chr13 30333466 30333532 -89950780 + B1F2 SINE Alu 3 64 -85 7 816 1036 209 79 34 chr13 30334119 30334386 -89949926 + B4 SINE B4 12 290 -2 7 816 233 277 134 0 chr13 30334992 30335104 -89949208 - RMER15 LTR ERVL -17 558 432 7 816 378 311 35 12 chr13 30335459 30335628 -89948684 + MER2 DNA MER2_type 168 340 -5 7 816 182 128 26 0 chr13 30336104 30336143 -89948169 + GA-rich Low_complexity Low_complexity 2 41 0 7 816 288 219 0 52 chr13 30336320 30336397 -89947915 + B1_Mur4 SINE Alu 9 81 -69 7 816 535 285 36 7 chr13 30336637 30336775 -89947537 + RSINE1 SINE B4 3 144 -21 7 816 243 88 0 0 chr13 30338411 30338445 -89945867 + (TAA)n Simple_repeat Simple_repeat 3 36 0 7 816 549 289 49 49 chr13 30338969 30339235 -89945077 - MER2 DNA MER2_type 0 345 80 7 816 920 129 151 58 chr13 30339513 30339719 -89944593 + URR1A DNA MER1_type 2 226 0 7 816 855 212 79 0 chr13 30340169 30340358 -89943954 - B3 SINE B2 -12 204 1 7 816 585 28 0 0 chr13 30340361 30340432 -89943880 + (TC)n Simple_repeat Simple_repeat 1 71 0 7 816 367 208 0 72 chr13 30340494 30340577 -89943735 - B1_Mus1 SINE Alu -66 82 6 7 816 186 339 16 0 chr13 30340755 30340817 -89943495 - MER5B DNA MER1_type -6 172 110 7 816 249 357 0 12 chr13 30340831 30340916 -89943396 + MIRm SINE MIR 193 276 0 7 816 280 262 24 0 chr13 30342319 30342403 -89941909 + RMER5 LTR ERV1 383 468 -66 7 816 211 288 197 0 chr13 30342841 30342907 -89941405 - ID2 SINE ID -4 79 1 7 816 267 31 0 0 chr13 30343196 30343228 -89941084 + (CAGA)n Simple_repeat Simple_repeat 3 34 0 7 816 450 285 158 0 chr13 30343746 30343904 -89940408 + Lx8 LINE L1 7142 7324 -149 7 816 468 0 0 0 chr13 30343905 30343957 -89940355 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 816 2138 288 75 20 chr13 30344084 30344870 -89939442 + Lx6 LINE L1 4695 5510 -370 7 816 492 18 0 0 chr13 30344870 30344927 -89939385 + (TG)n Simple_repeat Simple_repeat 1 57 0 7 816 2138 294 98 19 chr13 30344927 30345447 -89938865 + Lx6 LINE L1 5511 6084 -966 7 816 425 292 46 73 chr13 30346880 30346966 -89937346 - MLT1B LTR MaLR -14 376 296 7 816 1023 243 14 0 chr13 30346966 30347180 -89937132 + ID_B1 SINE B4 4 220 -4 7 816 425 292 46 73 chr13 30347180 30347311 -89937001 - MLT1B LTR MaLR -95 295 165 7 816 29 0 0 0 chr13 30347327 30347356 -89936956 + AT_rich Low_complexity Low_complexity 1 29 0 7 816 2086 241 31 41 chr13 30347403 30347917 -89936395 - Lx6 LINE L1 0 7460 6952 7 816 447 253 107 0 chr13 30347926 30348076 -89936236 - MLT1B LTR MaLR -221 169 4 7 816 289 265 0 14 chr13 30348228 30348297 -89936015 + PB1D7 SINE Alu 48 115 -5 7 816 467 102 11 0 chr13 30348300 30348388 -89935924 + (GA)n Simple_repeat Simple_repeat 2 90 0 7 816 258 32 0 0 chr13 30348493 30348524 -89935788 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 816 256 274 16 0 chr13 30348543 30348605 -89935707 - B4 SINE B4 -40 252 190 7 816 949 241 32 106 chr13 30348579 30348918 -89935394 - MTE2a LTR MaLR -57 322 9 7 816 236 216 0 73 chr13 30349949 30350004 -89934308 + PB1D9 SINE Alu 70 120 0 7 816 2114 43 27 0 chr13 30350157 30350415 -89933897 + L1_Mus1 LINE L1 6303 6567 0 7 816 581 252 102 34 chr13 30350497 30350702 -89933610 - ID_B1 SINE B4 -1 223 5 7 816 320 224 50 10 chr13 30351020 30351119 -89933193 - PB1 SINE Alu -1 126 24 7 816 369 0 0 0 chr13 30351210 30351251 -89933061 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 816 310 262 12 48 chr13 30351258 30351342 -89932970 - RSINE1 SINE B4 -17 148 68 7 816 503 304 43 37 chr13 30351378 30351542 -89932770 + B3A SINE B2 2 166 -32 7 816 198 0 0 0 chr13 30351546 30351568 -89932744 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 816 854 203 113 10 chr13 30351583 30351777 -89932535 - B3 SINE B2 -2 214 1 7 816 181 225 0 0 chr13 30352252 30352292 -89932020 + MIR SINE MIR 80 119 -143 7 816 622 312 129 39 chr13 30353080 30353570 -89930742 - RMER5 LTR ERV1 0 534 1 7 816 8442 37 1 0 chr13 30353593 30354639 -89929673 - L1Md_F2 LINE L1 0 6582 5536 7 816 697 191 95 34 chr13 30354731 30354757 -89929555 - B2_Mm2 SINE B2 -3 192 171 7 816 423 0 0 0 chr13 30354757 30354804 -89929508 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 816 697 191 95 34 chr13 30354804 30354956 -89929356 - B2_Mm2 SINE B2 -25 170 4 7 816 471 243 82 46 chr13 30354986 30355160 -89929152 - B3A SINE B2 -4 212 33 7 816 2522 175 84 61 chr13 30355170 30355729 -89928583 - RMER1B Other Other -4 1062 491 7 816 498 285 84 79 chr13 30356701 30357155 -89927157 + L1MC4 LINE L1 7433 7888 -154 7 816 202 109 43 21 chr13 30357164 30357211 -89927101 + (TA)n Simple_repeat Simple_repeat 1 48 0 7 816 252 217 33 0 chr13 30357901 30357961 -89926351 - MTEa LTR MaLR -8 371 310 7 816 1180 249 36 55 chr13 30357958 30358323 -89925989 + ORR1D2 LTR MaLR 9 366 -4 7 816 232 210 15 46 chr13 30358873 30358938 -89925374 - MTEa LTR MaLR -94 325 263 7 816 429 41 26 52 chr13 30358950 30359027 -89925285 + (TCCCC)n Simple_repeat Simple_repeat 3 77 0 7 816 988 271 51 105 chr13 30359052 30359417 -89924895 - L1M3 LINE L1 -1371 4769 4423 7 816 722 246 30 55 chr13 30359417 30359619 -89924693 - B3A SINE B2 0 198 2 7 816 988 271 51 105 chr13 30359619 30359842 -89924470 - L1M3 LINE L1 -1718 4422 4213 7 816 239 141 41 61 chr13 30359847 30359945 -89924367 + (TTAAA)n Simple_repeat Simple_repeat 2 97 0 8 816 482 248 25 0 chr13 30359957 30360078 -89924234 - L1M3 LINE L1 -1942 4201 4078 7 816 246 277 0 15 chr13 30360329 30360395 -89923917 + G-rich Low_complexity Low_complexity 2 66 0 8 816 320 221 64 24 chr13 30360434 30360559 -89923753 - MLT2B4 LTR ERVL -418 138 9 8 816 3176 157 109 41 chr13 30360640 30361353 -89922959 - RMER19B LTR ERVK -140 762 1 8 816 451 260 87 0 chr13 30361358 30361462 -89922850 + RSINE1 SINE B4 40 152 -13 8 816 261 0 0 0 chr13 30361494 30361523 -89922789 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 816 258 247 49 0 chr13 30361824 30361905 -89922407 - L1M5 LINE L1 -328 5796 5712 8 816 472 253 133 0 chr13 30363395 30363545 -89920767 + ID_B1 SINE B4 49 218 -6 8 816 589 316 56 0 chr13 30364193 30364389 -89919923 + Tigger5 DNA MER2_type 12 218 -2188 8 816 23 43 0 21 chr13 30364445 30364467 -89919845 + AT_rich Low_complexity Low_complexity 1 22 0 8 816 494 254 87 27 chr13 30364467 30364617 -89919695 - RSINE1 SINE B4 -4 161 3 8 816 23 43 0 21 chr13 30364617 30364642 -89919670 + AT_rich Low_complexity Low_complexity 1 25 0 8 816 462 294 94 12 chr13 30364930 30365185 -89919127 - L1ME1 LINE L1 -302 5877 5602 8 816 576 232 86 7 chr13 30365195 30365347 -89918965 - MTE2a LTR MaLR -15 364 201 8 816 16244 51 4 0 chr13 30365398 30368110 -89916202 - L1Md_F2 LINE L1 -4 6578 3859 8 816 2055 227 38 96 chr13 30368110 30368743 -89915569 - RMER19C LTR ERVK -15 596 1 8 816 803 204 23 0 chr13 30368766 30368938 -89915374 + MTE2a LTR MaLR 204 379 0 8 816 372 287 116 6 chr13 30368951 30369123 -89915189 - L1MC LINE L1 -742 5591 5401 8 816 754 242 10 13 chr13 30370519 30370696 -89913616 - B3 SINE B2 -22 173 2 8 816 442 270 11 84 chr13 30370702 30370764 -89913548 + RMER30 DNA MER1_type 15 76 -126 8 816 1476 69 0 36 chr13 30370764 30370960 -89913352 + B2_Mm2 SINE B2 2 190 -5 8 816 442 270 11 84 chr13 30370960 30371075 -89913237 + RMER30 DNA MER1_type 77 179 -23 8 816 3479 243 62 30 chr13 30371911 30373243 -89911069 - L1_Mur3 LINE L1 -3640 2240 856 8 816 1539 152 11 7 chr13 30373467 30373738 -89910574 - ORR1B2 LTR MaLR -95 272 1 8 816 7574 163 63 6 chr13 30373738 30375164 -89909148 - ORR1B2-int LTR MaLR 0 1509 2 8 816 2522 129 3 6 chr13 30375167 30375533 -89908779 - ORR1B2 LTR MaLR -2 365 1 8 816 1251 86 11 16 chr13 30376334 30376523 -89907789 - RLTR13C1 LTR ERVK 0 1114 927 8 816 237 0 0 0 chr13 30376537 30376568 -89907744 + RLTR1D LTR ERV1 11 41 -564 8 816 3017 126 6 4 chr13 30376581 30377060 -89907252 + RLTR1C LTR ERV1 8 487 -16 8 816 4844 78 70 27 chr13 30377083 30377208 -89907104 - RLTR13C1 LTR ERVK -184 799 663 8 816 1044 128 11 11 chr13 30377208 30377382 -89906930 + L1Md_F2 LINE L1 6397 6570 -12 8 816 4844 78 70 27 chr13 30377382 30378022 -89906290 - RLTR13C1 LTR ERVK -321 662 1 8 816 797 209 53 5 chr13 30378971 30379159 -89905153 - MTD LTR MaLR 0 419 223 8 816 417 20 0 0 chr13 30379167 30379217 -89905095 + (TTTCC)n Simple_repeat Simple_repeat 1 50 0 8 816 525 131 0 0 chr13 30379221 30379305 -89905007 + (TC)n Simple_repeat Simple_repeat 2 85 0 8 816 825 203 66 6 chr13 30379314 30379497 -89904815 - B2_Mm2 SINE B2 0 195 2 8 816 722 257 24 5 chr13 30379498 30379705 -89904607 - MTD LTR MaLR -208 211 1 8 816 273 57 0 0 chr13 30380207 30380242 -89904070 + (TTG)n Simple_repeat Simple_repeat 1 35 0 8 816 5793 133 4 26 chr13 30380589 30380687 -89903625 + Lx2 LINE L1 6073 6173 -824 8 816 2994 53 55 3 chr13 30380687 30381067 -89903245 - MTB LTR MaLR 0 400 1 8 816 5793 133 4 26 chr13 30381067 30381914 -89902398 + Lx2 LINE L1 6174 6997 0 8 816 197 33 0 32 chr13 30382101 30382132 -89902180 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 8 816 288 0 0 0 chr13 30382565 30382597 -89901715 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 816 259 318 4 10 chr13 30382607 30382760 -89901552 + MER66-int LTR ERV1 1541 1812 -5279 8 816 964 214 175 159 chr13 30383783 30384367 -89899945 - RMER20B LTR ERVK -24 603 11 8 816 1155 102 11 5 chr13 30384484 30384671 -89899641 - Lx2 LINE L1 -1 6996 6809 8 816 1647 212 38 15 chr13 30384867 30385260 -89899052 + MTD LTR MaLR 3 404 -15 8 816 413 286 26 9 chr13 30386680 30386793 -89897519 - B1F SINE Alu -33 116 2 8 816 486 0 0 0 chr13 30387706 30387760 -89896552 + (CTAA)n Simple_repeat Simple_repeat 1 54 0 8 816 455 270 23 31 chr13 30387761 30387891 -89896421 - B1_Mur1 SINE Alu -20 129 1 8 816 240 351 48 83 chr13 30387891 30387945 -89896367 - B4 SINE B4 -207 85 38 8 816 297 224 25 62 chr13 30388273 30388354 -89895958 - PB1D9 SINE Alu -1 119 42 8 816 396 0 0 0 chr13 30388392 30388436 -89895876 + (TC)n Simple_repeat Simple_repeat 1 44 0 8 816 369 0 0 0 chr13 30388436 30388476 -89895836 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 816 201 147 0 0 chr13 30388560 30388594 -89895718 + (TATATG)n Simple_repeat Simple_repeat 6 39 0 8 816 1044 221 34 0 chr13 30389414 30389618 -89894694 - B3 SINE B2 -5 211 1 8 816 21 36 0 0 chr13 30389807 30389835 -89894477 + AT_rich Low_complexity Low_complexity 1 28 0 8 816 243 333 101 7 chr13 30390957 30391096 -89893216 - RMER5 LTR ERV1 -4 530 379 8 816 261 0 0 0 chr13 30391098 30391127 -89893185 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 8 816 423 0 0 0 chr13 30391269 30391316 -89892996 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 816 1232 54 0 33 chr13 30391473 30391611 -89892701 + B1_Mus1 SINE Alu 1 135 -13 8 816 558 0 0 0 chr13 30391611 30391673 -89892639 + (CAAAA)n Simple_repeat Simple_repeat 2 63 0 8 816 1232 54 0 33 chr13 30391673 30391687 -89892625 + B1_Mus1 SINE Alu 136 148 0 8 816 384 103 0 0 chr13 30391692 30391750 -89892562 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 8 816 2467 158 7 10 chr13 30392056 30392460 -89891852 + RLTR17 LTR ERVK 290 692 0 8 816 2059 223 79 17 chr13 30392552 30393085 -89891227 - Lx9 LINE L1 -1 7643 7078 8 816 3530 203 40 26 chr13 30393096 30393820 -89890492 + Lx9 LINE L1 6341 7074 -570 8 816 186 43 0 0 chr13 30393984 30394007 -89890305 + (ATTG)n Simple_repeat Simple_repeat 4 26 0 8 816 241 250 185 14 chr13 30394034 30394180 -89890132 + L1M3 LINE L1 4884 5054 -1086 8 816 236 371 41 0 chr13 30394249 30394346 -89889966 + PB1D10 SINE Alu 1 101 -16 8 816 260 307 11 11 chr13 30394434 30394523 -89889789 + GA-rich Low_complexity Low_complexity 4 92 0 8 816 513 0 0 0 chr13 30394704 30394761 -89889551 + (TC)n Simple_repeat Simple_repeat 2 58 0 8 816 270 0 0 0 chr13 30394761 30394790 -89889522 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 816 732 289 18 27 chr13 30395086 30395310 -89889002 + ID_B1 SINE B4 2 223 -1 8 816 263 311 52 29 chr13 30395416 30395552 -89888760 + L1ME2z LINE L1 5662 5800 -364 8 816 322 351 58 47 chr13 30395611 30395868 -89888444 + MLT2C1 LTR ERVL 91 350 -47 8 816 291 193 63 18 chr13 30395879 30395990 -89888322 + (TAGA)n Simple_repeat Simple_repeat 1 116 0 8 816 258 295 112 29 chr13 30396034 30396240 -89888072 + L1ME2z LINE L1 5813 6035 -409 8 816 405 366 45 17 chr13 30397717 30397895 -89886417 - MLT1K LTR MaLR -314 281 99 8 816 186 191 0 0 chr13 30397951 30397993 -89886319 + (TAA)n Simple_repeat Simple_repeat 3 44 0 8 816 450 0 0 0 chr13 30398654 30398704 -89885608 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 816 21 0 0 0 chr13 30400830 30400851 -89883461 + AT_rich Low_complexity Low_complexity 1 21 0 8 816 443 169 12 12 chr13 30400980 30401064 -89883248 + ORR1D2 LTR MaLR 1 84 -286 8 816 832 187 41 62 chr13 30401071 30401265 -89883047 + ORR1C2 LTR MaLR 5 194 -190 8 816 446 217 28 14 chr13 30401267 30401412 -89882900 + C-rich Low_complexity Low_complexity 2 148 0 8 816 619 208 118 12 chr13 30401423 30401584 -89882728 + ORR1C2 LTR MaLR 184 361 -9 8 816 1887 150 28 22 chr13 30402404 30402724 -89881588 + RLTRETN_Mm LTR ERVK 1 322 0 8 816 340 324 96 100 chr13 30403082 30403312 -89881000 - B4 SINE B4 -63 229 1 8 816 1002 243 197 46 chr13 30403314 30403750 -89880562 + Lx8 LINE L1 6967 7468 -5 8 816 520 278 188 0 chr13 30403759 30403993 -89880319 + L1_Rod LINE L1 3749 4026 -1854 8 816 458 234 8 0 chr13 30404029 30404157 -89880155 + (CA)n Simple_repeat Simple_repeat 1 129 0 8 816 214 314 24 32 chr13 30404674 30404799 -89879513 + (TATG)n Simple_repeat Simple_repeat 2 125 0 8 816 295 235 35 0 chr13 30404676 30404761 -89879551 + (TATATG)n Simple_repeat Simple_repeat 6 93 0 8 816 270 312 91 9 chr13 30405537 30405647 -89878665 + MER58B DNA MER1_type 174 292 -49 8 816 962 236 25 5 chr13 30406355 30406551 -89877761 + MTE2b LTR MaLR 1 200 -179 8 816 4740 12 0 0 chr13 30406555 30407048 -89877264 + MT2_Mm LTR ERVL 1 493 0 8 12 41340 16 14 0 chr13 30407048 30412335 -89871977 + MERVL-int LTR ERVL 1 5360 -125 8 817 368 179 46 35 chr13 30412335 30412422 -89871890 + ORR1A3-int LTR MaLR 553 640 -1323 8 817 322 0 0 0 chr13 30412422 30412460 -89871852 + MERVL-int LTR ERVL 5448 5485 0 8 817 4740 12 0 0 chr13 30412460 30412953 -89871359 + MT2_Mm LTR ERVL 1 493 0 8 817 556 229 32 96 chr13 30412957 30413145 -89871167 + MTE2b LTR MaLR 204 379 0 8 817 202 279 79 34 chr13 30413234 30413323 -89870989 + L2 LINE L2 2439 2531 -888 8 817 851 185 13 20 chr13 30413471 30413620 -89870692 + B1_Mur3 SINE Alu 2 149 0 8 817 336 311 0 0 chr13 30414187 30414261 -89870051 - ID4_ SINE ID -6 77 4 8 817 201 286 18 0 chr13 30414406 30414462 -89869850 + (TATATG)n Simple_repeat Simple_repeat 3 59 0 8 817 1216 108 31 26 chr13 30414491 30414682 -89869630 + B2_Mm2 SINE B2 2 193 -2 8 817 497 126 23 0 chr13 30414759 30414846 -89869466 + (TTCTCC)n Simple_repeat Simple_repeat 4 92 0 8 817 22 0 0 0 chr13 30414884 30414906 -89869406 + AT_rich Low_complexity Low_complexity 1 22 0 8 817 2524 70 0 0 chr13 30415065 30415365 -89868947 + L1_Mus2 LINE L1 6266 6565 -1 8 817 261 0 0 0 chr13 30416206 30416235 -89868077 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 817 675 256 0 0 chr13 30416236 30416373 -89867939 - B1_Mur1 SINE Alu -12 137 1 8 817 190 143 20 20 chr13 30417323 30417373 -89866939 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 817 250 290 58 0 chr13 30417463 30417532 -89866780 - Lx8 LINE L1 -228 7245 7173 8 817 239 250 0 0 chr13 30417533 30417589 -89866723 + Lx9 LINE L1 6899 6954 -690 8 817 294 156 0 0 chr13 30418237 30418301 -89866011 + GA-rich Low_complexity Low_complexity 2 65 0 8 817 3591 30 5 0 chr13 30418365 30418759 -89865553 - MTA_Mm LTR MaLR 0 396 1 9 817 8308 52 8 23 chr13 30418759 30419486 -89864826 - MTA_Mm-int LTR MaLR 0 1098 390 9 817 5145 30 16 3 chr13 30419486 30420062 -89864250 - L1Md_F3 LINE L1 0 6584 6002 9 817 8308 52 8 23 chr13 30420062 30420449 -89863863 - MTA_Mm-int LTR MaLR -709 389 1 9 817 2713 30 193 0 chr13 30420449 30420781 -89863531 - MTA_Mm LTR MaLR 0 396 1 9 817 298 290 107 14 chr13 30420786 30420926 -89863386 - MIR SINE MIR -54 208 56 9 817 264 256 31 82 chr13 30420939 30421037 -89863275 + RMER15 LTR ERVL 1 93 -482 9 817 1305 180 5 0 chr13 30421072 30421294 -89863018 - URR1B DNA MER1_type -2 223 1 9 817 2086 247 31 47 chr13 30421280 30421858 -89862454 + RMER15 LTR ERVL 2 570 -5 9 817 946 159 7 0 chr13 30423077 30423222 -89861090 + B1_Mus1 SINE Alu 3 148 0 9 817 345 293 149 63 chr13 30424022 30424079 -89860233 - Lx8 LINE L1 -102 7371 7329 9 817 237 119 0 0 chr13 30424079 30424121 -89860191 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 817 345 293 149 63 chr13 30424121 30424318 -89859994 - Lx8 LINE L1 -145 7328 7096 9 817 1093 311 166 12 chr13 30424319 30424915 -89859397 - Lx8 LINE L1 -586 6887 6200 9 817 600 14 0 0 chr13 30424919 30424988 -89859324 + (CA)n Simple_repeat Simple_repeat 2 70 0 9 817 2205 232 73 19 chr13 30425191 30425807 -89858505 - Lx8 LINE L1 -25 5822 5174 9 817 213 269 32 39 chr13 30425840 30425995 -89858317 + (CATAT)n Simple_repeat Simple_repeat 2 155 0 9 817 845 212 64 44 chr13 30426007 30426258 -89858054 - Lx8 LINE L1 -640 5207 4952 9 817 224 143 0 45 chr13 30426509 30426553 -89857759 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 817 405 255 79 9 chr13 30427318 30427488 -89856824 - L1M4 LINE L1 -2352 3794 3615 9 817 1075 80 0 33 chr13 30427488 30427670 -89856642 + (TTTCC)n Simple_repeat Simple_repeat 2 177 0 9 817 588 65 0 0 chr13 30427670 30427747 -89856565 + (TTTC)n Simple_repeat Simple_repeat 4 80 0 9 817 249 33 0 0 chr13 30428194 30428224 -89856088 + (CGGGG)n Simple_repeat Simple_repeat 1 30 0 9 817 207 0 0 0 chr13 30429355 30429378 -89854934 + (T)n Simple_repeat Simple_repeat 1 23 0 9 817 414 0 0 0 chr13 30429462 30429508 -89854804 + (GA)n Simple_repeat Simple_repeat 2 47 0 9 817 342 0 0 0 chr13 30430284 30430322 -89853990 + (CTAA)n Simple_repeat Simple_repeat 1 38 0 9 817 25 0 0 0 chr13 30432208 30432233 -89852079 + AT_rich Low_complexity Low_complexity 1 25 0 9 817 573 133 0 0 chr13 30432316 30432414 -89851898 + (CA)n Simple_repeat Simple_repeat 2 99 0 9 817 412 264 139 0 chr13 30432653 30432782 -89851530 + MER5A1 DNA MER1_type 18 164 -2 9 817 402 200 248 17 chr13 30432864 30432981 -89851331 + B1_Mus1 SINE Alu 5 148 0 9 817 332 287 59 0 chr13 30433504 30433605 -89850707 + PB1 SINE Alu 1 107 -20 9 817 238 265 0 0 chr13 30433658 30433707 -89850605 + ID SINE ID 1 49 -175 9 817 25 0 0 0 chr13 30436731 30436756 -89847556 + AT_rich Low_complexity Low_complexity 1 25 0 9 817 468 0 0 0 chr13 30437835 30437887 -89846425 + (TG)n Simple_repeat Simple_repeat 1 52 0 9 817 227 226 208 0 chr13 30437889 30437942 -89846370 - ID4_ SINE ID -8 75 12 9 817 2107 200 34 12 chr13 30438102 30438512 -89845800 + MTD LTR MaLR 1 419 0 9 817 366 281 108 46 chr13 30439147 30439341 -89844971 - MER3 DNA MER1_type -3 206 1 9 817 3099 46 11 3 chr13 30439360 30439728 -89844584 - L1Md_F3 LINE L1 0 6584 6214 9 817 198 0 0 0 chr13 30440596 30440618 -89843694 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 817 498 75 0 0 chr13 30440820 30440887 -89843425 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 9 817 364 255 19 67 chr13 30441684 30441789 -89842523 + B4 SINE B4 1 100 -192 9 817 294 234 23 23 chr13 30441910 30442081 -89842231 + (CATATA)n Simple_repeat Simple_repeat 5 175 0 9 817 338 115 0 16 chr13 30442128 30442190 -89842122 + (CA)n Simple_repeat Simple_repeat 2 62 0 9 817 188 0 0 69 chr13 30443316 30443345 -89840967 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 9 817 334 195 198 44 chr13 30443345 30443436 -89840876 - PB1D10 SINE Alu -10 107 3 9 817 594 0 0 0 chr13 30444342 30444408 -89839904 + (CAAG)n Simple_repeat Simple_repeat 2 67 0 9 817 201 39 0 0 chr13 30444415 30444441 -89839871 + (CCCCCA)n Simple_repeat Simple_repeat 3 28 0 9 817 875 156 231 0 chr13 30444651 30444824 -89839488 - B3 SINE B2 0 216 4 9 817 5887 32 4 0 chr13 30444923 30445610 -89838702 + L1Md_F2 LINE L1 5893 6582 0 9 817 328 306 101 82 chr13 30446216 30446572 -89837740 - RLTR11A2 LTR ERVK -24 503 141 9 817 441 95 0 0 chr13 30446572 30446635 -89837677 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 9 817 282 220 242 17 chr13 30446646 30446766 -89837546 - RMER20B LTR ERVK -250 377 231 9 817 414 0 0 0 chr13 30447812 30447858 -89836454 + (CATA)n Simple_repeat Simple_repeat 2 47 0 9 817 916 262 169 52 chr13 30448408 30448951 -89835361 - Lx7 LINE L1 -5 7691 7085 9 817 861 230 80 0 chr13 30449366 30449566 -89834746 + B3 SINE B2 1 216 0 9 817 1207 56 0 0 chr13 30449829 30449971 -89834341 - B1_Mus1 SINE Alu -6 142 1 9 817 224 282 0 14 chr13 30451186 30451258 -89833054 + GA-rich Low_complexity Low_complexity 3 73 0 9 817 233 356 35 0 chr13 30451281 30451396 -89832916 - MER20 DNA MER1_type -16 203 85 9 817 409 329 14 7 chr13 30452215 30452362 -89831950 + RSINE1 SINE B4 2 149 -16 9 817 21 36 0 0 chr13 30452368 30452396 -89831916 + AT_rich Low_complexity Low_complexity 1 28 0 9 817 320 225 162 0 chr13 30453579 30453659 -89830653 + RMER30 DNA MER1_type 109 201 -1 9 817 353 226 0 70 chr13 30453825 30453925 -89830387 + PB1D7 SINE Alu 17 109 -11 9 817 639 269 35 44 chr13 30454682 30454908 -89829404 + B4A SINE B4 1 224 -68 9 817 180 0 0 0 chr13 30455555 30455575 -89828737 + (A)n Simple_repeat Simple_repeat 1 20 0 9 817 491 211 53 0 chr13 30456351 30456465 -89827847 - ID_B1 SINE B4 0 224 105 9 817 2287 222 92 45 chr13 30457455 30458808 -89825504 + L1_Mur3 LINE L1 216 1615 -4265 9 817 3366 140 32 86 chr13 30458803 30459458 -89824854 + Lx3C LINE L1 6357 6976 0 9 817 215 297 42 52 chr13 30460072 30460168 -89824144 - L2b LINE L2 -59 3316 3222 9 817 2039 117 12 18 chr13 30461996 30462335 -89821977 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 817 56264 29 9 2 chr13 30462335 30468760 -89815552 + IAPEz-int LTR ERVK 8 6478 -3 9 817 2039 117 12 18 chr13 30468764 30469103 -89815209 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 817 7282 50 16 0 chr13 30469122 30470016 -89814296 + L1Md_F2 LINE L1 5675 6582 0 9 817 288 0 0 0 chr13 30470488 30470520 -89813792 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 9 817 231 36 0 0 chr13 30470520 30470548 -89813764 + (TC)n Simple_repeat Simple_repeat 1 28 0 9 817 393 22 0 0 chr13 30470548 30470594 -89813718 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 817 22 0 0 0 chr13 30471861 30471883 -89812429 + AT_rich Low_complexity Low_complexity 1 22 0 9 817 696 284 88 35 chr13 30472131 30472474 -89811838 - MTE2b LTR MaLR -18 361 1 9 817 434 266 29 71 chr13 30475180 30475350 -89808962 - ORR1D1 LTR MaLR -175 199 37 9 817 845 107 8 0 chr13 30475350 30475481 -89808831 + (CATA)n Simple_repeat Simple_repeat 1 132 0 9 817 395 51 16 93 chr13 30475604 30475733 -89808579 + T-rich Low_complexity Low_complexity 2 120 0 9 817 1057 64 0 0 chr13 30475737 30475878 -89808434 - B1_Mus1 SINE Alu 0 148 8 9 817 1453 242 19 29 chr13 30476594 30476972 -89807340 + ORR1D1 LTR MaLR 1 374 0 9 817 25 31 0 0 chr13 30477745 30477777 -89806535 + AT_rich Low_complexity Low_complexity 1 32 0 9 817 689 50 20 0 chr13 30478379 30478480 -89805832 + (TCTA)n Simple_repeat Simple_repeat 1 103 0 9 817 554 131 10 0 chr13 30478491 30478590 -89805722 + (TA)n Simple_repeat Simple_repeat 1 100 0 9 817 248 0 31 0 chr13 30478784 30478816 -89805496 + (CAAAAA)n Simple_repeat Simple_repeat 6 38 0 9 817 4025 100 22 0 chr13 30479127 30479729 -89804583 + MusHAL1 LINE L1 1472 2086 -626 9 817 1580 117 35 3 chr13 30479757 30480021 -89804291 + Lx LINE L1 5712 6001 -653 9 817 583 112 9 27 chr13 30480022 30480132 -89804180 + Lx LINE L1 6534 6641 -13 9 817 691 60 0 19 chr13 30480137 30480240 -89804072 + (GA)n Simple_repeat Simple_repeat 1 101 0 9 817 573 248 0 0 chr13 30480409 30480526 -89803786 - RSINE1 SINE B4 -43 122 6 9 817 193 91 68 0 chr13 30481912 30481956 -89802356 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 9 817 243 278 0 0 chr13 30482172 30482244 -89802068 + (ATGGTG)n Simple_repeat Simple_repeat 3 74 0 9 817 3029 122 167 97 chr13 30483163 30483845 -89800467 - RMER19A LTR ERVK -7 730 1 9 817 3714 52 43 71 chr13 30484099 30484632 -89799680 + MURVY-LTR LTR ERV1 1 518 -1 9 817 567 53 0 0 chr13 30485706 30485781 -89798531 + (TG)n Simple_repeat Simple_repeat 1 75 0 9 817 277 231 269 0 chr13 30485795 30485899 -89798413 - RSINE1 SINE B4 -31 134 3 9 817 425 268 203 0 chr13 30485991 30486114 -89798198 + B1F2 SINE Alu 2 149 0 9 817 469 337 31 102 chr13 30487921 30488215 -89796097 + B4 SINE B4 14 286 -6 9 817 216 0 0 0 chr13 30488237 30488261 -89796051 + (TC)n Simple_repeat Simple_repeat 1 24 0 9 817 369 0 0 0 chr13 30488261 30488301 -89796011 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 817 21 0 0 0 chr13 30489128 30489149 -89795163 + AT_rich Low_complexity Low_complexity 1 21 0 9 817 701 168 0 0 chr13 30489726 30489839 -89794473 - B1_Mus2 SINE Alu -2 145 33 9 817 21 0 0 0 chr13 30489855 30489876 -89794436 + AT_rich Low_complexity Low_complexity 1 21 0 9 817 348 211 152 79 chr13 30490001 30490166 -89794146 + B4A SINE B4 115 291 -1 9 817 1054 156 26 21 chr13 30490199 30490389 -89793923 + B2_Mm2 SINE B2 1 191 -4 9 817 23 54 0 0 chr13 30491065 30491102 -89793210 + AT_rich Low_complexity Low_complexity 1 37 0 9 817 631 236 71 30 chr13 30491954 30492220 -89792092 + RMER10A LTR ERVL 166 442 0 9 817 237 65 0 0 chr13 30492968 30492999 -89791313 + (CA)n Simple_repeat Simple_repeat 1 31 0 9 817 637 185 46 8 chr13 30493149 30493280 -89791032 - Lx7 LINE L1 0 7696 7561 9 817 33 43 0 0 chr13 30493309 30493356 -89790956 + AT_rich Low_complexity Low_complexity 1 47 0 1 817 843 230 49 5 chr13 30493356 30493561 -89790751 - Lx7 LINE L1 -333 7363 7150 9 817 3665 200 49 39 chr13 30493566 30494667 -89789645 - Lx7 LINE L1 -1210 6486 5370 9 817 3344 136 33 13 chr13 30494663 30494925 -89789387 - L1_Mur3 LINE L1 -2624 3256 3002 1 817 786 97 0 0 chr13 30494925 30495038 -89789274 + (TTTC)n Simple_repeat Simple_repeat 2 114 0 1 817 3344 136 33 13 chr13 30495038 30495385 -89788927 - L1_Mur3 LINE L1 -2879 3001 2637 1 817 378 209 35 0 chr13 30495409 30495495 -89788817 - L1_Mur3 LINE L1 -7361 367 279 1 817 189 0 0 0 chr13 30495579 30495600 -89788712 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1 817 326 322 0 11 chr13 30495600 30495691 -89788621 - PB1D7 SINE Alu -14 106 17 1 817 237 338 0 0 chr13 30495872 30495946 -89788366 - Lx8 LINE L1 -143 7330 7257 1 817 1222 278 50 11 chr13 30495964 30496321 -89787991 - Lx8 LINE L1 -571 6902 6532 1 817 1126 315 42 14 chr13 30496323 30496680 -89787632 + Lx8 LINE L1 6196 6562 -911 1 817 726 274 37 72 chr13 30496897 30497269 -89787043 - RLTR26 LTR ERVK -212 430 29 1 817 2267 307 38 21 chr13 30497340 30498207 -89786105 + Lx8 LINE L1 6590 7471 -2 1 817 779 165 6 0 chr13 30498226 30498402 -89785910 + GA-rich Low_complexity Low_complexity 2 178 0 1 817 195 42 0 0 chr13 30498402 30498426 -89785886 + (TAGA)n Simple_repeat Simple_repeat 1 24 0 1 817 235 358 85 12 chr13 30498951 30499115 -89785197 - MIR SINE MIR -10 252 77 1 817 272 291 0 0 chr13 30499289 30499368 -89784944 - L1MB5 LINE L1 0 6174 6096 1 817 181 246 39 104 chr13 30500241 30500318 -89783994 - L2 LINE L2 -2093 1326 1255 1 817 4196 136 151 121 chr13 30500453 30501433 -89782879 - RLTR25A LTR ERVK 0 1028 20 2 817 2442 146 42 18 chr13 30501602 30501987 -89782325 - ORR1B1 LTR MaLR 0 394 1 3 817 3350 167 115 6 chr13 30502983 30503668 -89780644 + ORR1B1-int LTR MaLR 750 1509 0 4 817 2295 169 39 26 chr13 30503668 30504057 -89780255 + ORR1B1 LTR MaLR 1 394 0 4 817 252 283 90 45 chr13 30504062 30504173 -89780139 - ORR1E LTR MaLR 0 379 264 5 817 441 0 0 0 chr13 30504213 30504262 -89780050 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 817 380 319 18 9 chr13 30504277 30504391 -89779921 - ORR1E LTR MaLR -215 144 30 5 817 5492 168 26 25 chr13 30505129 30505221 -89779091 + L1_Mur3 LINE L1 2901 2995 -2885 7 817 228 35 0 0 chr13 30505221 30505250 -89779062 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 817 5492 168 26 25 chr13 30505250 30506293 -89778019 + L1_Mur3 LINE L1 2996 4037 -1843 7 817 4049 215 18 23 chr13 30506264 30507117 -89777195 + Lx6 LINE L1 6083 6930 -530 9 817 2121 221 44 87 chr13 30507115 30507769 -89776543 + Lx7 LINE L1 7071 7696 0 1 817 773 116 25 8 chr13 30507947 30508069 -89776243 + B1_Mur3 SINE Alu 21 144 -5 1 817 24 0 0 0 chr13 30508071 30508095 -89776217 + AT_rich Low_complexity Low_complexity 1 24 0 1 817 738 254 82 43 chr13 30508367 30508622 -89775690 + B4A SINE B4 5 269 -23 1 817 241 282 63 13 chr13 30508842 30508921 -89775391 - ID4_ SINE ID 0 83 1 1 817 472 272 56 8 chr13 30508940 30509066 -89775246 - B1F1 SINE Alu -16 133 2 1 817 752 229 21 0 chr13 30509153 30509297 -89775015 + B1_Mur1 SINE Alu 3 149 0 1 817 351 0 0 0 chr13 30511207 30511246 -89773066 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 817 513 0 0 0 chr13 30511246 30511302 -89773010 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 817 1708 242 39 3 chr13 30511474 30511835 -89772477 + ORR1D1 LTR MaLR 1 374 0 1 817 672 297 92 48 chr13 30512314 30512749 -89771563 + L1MC4 LINE L1 6798 7251 -791 2 817 1223 75 0 13 chr13 30512829 30512978 -89771334 - B1_Mus2 SINE Alu 0 147 1 2 817 380 241 177 0 chr13 30513112 30513253 -89771059 + L1MC4 LINE L1 7620 7785 -257 2 817 713 300 64 103 chr13 30513306 30513744 -89770568 + RLTR23 LTR ERV1 10 430 0 2 817 884 311 12 76 chr13 30513884 30514314 -89769998 - MTE2a LTR MaLR -18 401 6 2 817 746 338 65 20 chr13 30514316 30514561 -89769751 + B4 SINE B4 19 274 -18 2 817 2312 137 3 9 chr13 30514571 30514902 -89769410 + ORR1A4 LTR MaLR 1 329 0 2 817 330 26 0 0 chr13 30514979 30515018 -89769294 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 817 24 0 0 0 chr13 30515283 30515307 -89769005 + AT_rich Low_complexity Low_complexity 1 24 0 2 817 26 64 0 0 chr13 30515472 30515519 -89768793 + AT_rich Low_complexity Low_complexity 1 47 0 2 817 1380 214 97 33 chr13 30515570 30515899 -89768413 + ORR1D2 LTR MaLR 1 350 -20 2 817 375 23 0 0 chr13 30515899 30515943 -89768369 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 817 362 254 124 26 chr13 30516600 30516713 -89767599 + B1F SINE Alu 5 128 -21 3 817 269 285 124 45 chr13 30517215 30517480 -89766832 + L1_Rod LINE L1 550 835 -6337 3 817 207 0 0 0 chr13 30517480 30517503 -89766809 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 817 626 211 18 0 chr13 30517810 30517919 -89766393 - PB1D9 SINE Alu -9 111 1 3 817 273 70 17 34 chr13 30518020 30518079 -89766233 + (TTTA)n Simple_repeat Simple_repeat 4 61 0 3 817 32 26 0 0 chr13 30518098 30518137 -89766175 + AT_rich Low_complexity Low_complexity 1 39 0 3 817 1626 142 78 4 chr13 30520439 30520708 -89763604 + RLTR28 LTR ERVL 1 289 -235 3 817 1125 170 52 13 chr13 30520920 30521153 -89763159 + RLTR28 LTR ERVL 269 510 -14 3 817 724 278 12 6 chr13 30521480 30521643 -89762669 + RSINE1 SINE B4 2 165 0 3 817 1408 170 9 0 chr13 30522200 30522418 -89761894 - URR1B DNA MER1_type -4 221 2 3 817 311 188 247 0 chr13 30522463 30522548 -89761764 - URR1B DNA MER1_type -120 105 1 3 817 32591 118 25 33 chr13 30523558 30525329 -89758983 + L1_Mus1 LINE L1 449 2195 -3688 4 817 1227 56 7 0 chr13 30525329 30525473 -89758839 - B1_Mm SINE Alu 0 147 3 4 817 32591 94 12 12 chr13 30525473 30527003 -89757309 + L1_Mus1 LINE L1 2196 3716 -2167 4 817 1670 32 0 11 chr13 30527003 30527192 -89757120 + B2_Mm1a SINE B2 2 188 -5 4 817 32591 77 12 8 chr13 30527192 30530009 -89754303 + L1_Mus1 LINE L1 3717 6567 0 4 817 191 288 110 0 chr13 30530507 30530580 -89753732 - MIRc SINE MIR -133 135 55 4 817 1007 268 98 4 chr13 30531434 30531736 -89752576 - Lx6 LINE L1 -177 7283 6957 4 817 5185 157 40 1 chr13 30531736 30532616 -89751696 - L1_Mur3 LINE L1 -70 5810 4897 4 817 593 106 9 0 chr13 30532629 30532742 -89751570 + (CAGAGA)n Simple_repeat Simple_repeat 4 117 0 4 817 465 19 0 0 chr13 30532743 30532797 -89751515 + (CAGG)n Simple_repeat Simple_repeat 1 54 0 4 817 3648 107 88 158 chr13 30532839 30533706 -89750606 + RLTR13C1 LTR ERVK 1 983 0 4 817 537 181 102 29 chr13 30533708 30533845 -89750467 - L1_Mur3 LINE L1 -1005 4875 4729 4 817 7809 63 11 5 chr13 30533872 30534871 -89749441 - L1_Mus1 LINE L1 0 6567 5587 4 817 389 194 50 30 chr13 30534869 30534970 -89749342 - L1_Mur3 LINE L1 -1144 4736 4634 4 817 540 163 0 0 chr13 30534972 30535101 -89749211 + (TG)n Simple_repeat Simple_repeat 1 129 0 5 817 11234 184 91 89 chr13 30535101 30536227 -89748085 - L1_Mur3 LINE L1 -1251 4629 3471 4 817 324 0 0 0 chr13 30536227 30536263 -89748049 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 5 817 11234 184 91 89 chr13 30536263 30536416 -89747896 - L1_Mur3 LINE L1 -2410 3470 3320 4 817 204 40 0 0 chr13 30536416 30536441 -89747871 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 5 817 11234 184 91 89 chr13 30536441 30536887 -89747425 - L1_Mur3 LINE L1 -2561 3319 2927 4 817 3699 65 18 33 chr13 30536887 30537376 -89746936 + RLTR45 LTR ERVK 1 482 0 5 817 11234 183 65 63 chr13 30537376 30539744 -89744568 - L1_Mur3 LINE L1 -2954 2926 528 4 818 1260 61 0 7 chr13 30540640 30540789 -89743523 + B1_Mus1 SINE Alu 1 148 0 5 818 581 223 106 69 chr13 30540811 30540999 -89743313 - B3A SINE B2 0 198 4 5 818 657 259 14 0 chr13 30541476 30541615 -89742697 + B1F SINE Alu 2 142 -7 5 818 1170 112 0 0 chr13 30541619 30541797 -89742515 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 5 818 277 317 56 76 chr13 30542100 30542349 -89741963 - MER34A1 LTR ERV1 -78 509 266 5 818 1244 293 50 38 chr13 30542584 30543088 -89741224 - RMER5 LTR ERV1 -1 533 24 5 818 403 346 8 16 chr13 30543197 30543326 -89740986 - MER34A1 LTR ERV1 -324 263 136 5 818 458 255 0 30 chr13 30543315 30543416 -89740896 + B1F SINE Alu 29 126 -23 6 818 273 204 0 0 chr13 30543416 30543465 -89740847 + B1F SINE Alu 99 147 -2 6 818 201 167 0 0 chr13 30543465 30543501 -89740811 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 6 818 350 295 113 16 chr13 30544186 30544310 -89740002 + MER20 DNA MER1_type 82 217 -2 6 818 2904 46 0 0 chr13 30545585 30545932 -89738380 - L1Md_F3 LINE L1 -21 6563 6217 6 818 22 35 0 0 chr13 30545933 30545962 -89738350 + AT_rich Low_complexity Low_complexity 1 29 0 6 818 735 243 52 26 chr13 30545962 30546194 -89738118 + L1MA8 LINE L1 6028 6265 -26 6 818 677 223 67 56 chr13 30546286 30546481 -89737831 - B3A SINE B2 -1 197 1 6 818 552 272 109 11 chr13 30546489 30546529 -89737783 - B3A SINE B2 -6 192 150 6 818 546 57 0 0 chr13 30546529 30546599 -89737713 + (TG)n Simple_repeat Simple_repeat 1 70 0 6 818 552 272 109 11 chr13 30546599 30546733 -89737579 - B3A SINE B2 -49 149 2 6 818 1608 249 66 8 chr13 30547983 30548379 -89735933 - MTD LTR MaLR 0 419 1 6 818 512 194 67 7 chr13 30548383 30548518 -89735794 - MTD-int LTR MaLR -4 1254 1112 6 818 4667 85 10 16 chr13 30548530 30549210 -89735102 - Lx3_Mus LINE L1 -426 6583 5908 7 818 204 67 0 0 chr13 30549230 30549260 -89735052 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 7 818 2151 87 10 3 chr13 30549275 30549565 -89734747 - Lx3_Mus LINE L1 -1087 5922 5631 7 818 3096 89 39 2 chr13 30549565 30549980 -89734332 + Lx3_Mus LINE L1 6579 7008 -1 7 818 815 254 53 35 chr13 30550000 30550228 -89734084 - MTD-int LTR MaLR -198 1060 829 6 818 513 150 96 39 chr13 30550201 30550305 -89734007 - ORR1D2 LTR MaLR -258 112 3 7 818 387 0 0 0 chr13 30550791 30550834 -89733478 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 818 406 300 14 149 chr13 30550886 30551027 -89733285 - RSINE1 SINE B4 -41 124 3 7 818 264 158 0 0 chr13 30551599 30551656 -89732656 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 7 818 208 191 24 0 chr13 30551662 30551746 -89732566 + GA-rich Low_complexity Low_complexity 1 86 0 7 818 26 0 0 0 chr13 30551851 30551877 -89732435 + AT_rich Low_complexity Low_complexity 1 26 0 7 818 3378 117 41 21 chr13 30552178 30552454 -89731858 - Lx2 LINE L1 -831 6166 5901 7 818 3133 98 29 49 chr13 30552454 30552946 -89731366 + RLTR45 LTR ERVK 1 482 0 8 818 3378 132 99 19 chr13 30552946 30553336 -89730976 - Lx2 LINE L1 -1097 5900 5372 7 818 2093 25 49 4 chr13 30553336 30553581 -89730731 - L1Md_F2 LINE L1 0 6582 6327 8 818 3268 159 209 15 chr13 30553581 30553939 -89730373 - Lx2 LINE L1 -515 5371 5013 7 818 5462 99 48 27 chr13 30553939 30554729 -89729583 + Lx2 LINE L1 6191 6997 0 8 818 2145 175 32 30 chr13 30554730 30555171 -89729141 + RMER10A LTR ERVL 1 442 0 8 818 224 172 17 0 chr13 30555236 30555294 -89729018 + CT-rich Low_complexity Low_complexity 2 60 0 8 818 2879 114 22 36 chr13 30555755 30556202 -89728110 - BGLII_B LTR ERVK 0 441 1 8 818 2106 201 59 31 chr13 30556554 30557062 -89727250 - RMER5 LTR ERV1 0 534 13 8 818 325 344 0 2 chr13 30557932 30558046 -89726266 + B1F SINE Alu 5 117 -3 8 818 858 156 0 214 chr13 30558211 30558440 -89725872 + URR1A DNA MER1_type 1 180 -46 8 818 934 284 39 60 chr13 30558431 30558765 -89725547 + MTE2a LTR MaLR 23 349 -30 8 818 299 362 21 0 chr13 30559062 30559156 -89725156 + B4A SINE B4 3 98 -194 9 818 467 176 146 18 chr13 30559168 30559237 -89725075 + B4A SINE B4 165 234 -58 9 818 1196 95 124 21 chr13 30559237 30559431 -89724881 + Lx LINE L1 6441 6654 0 9 818 467 176 146 18 chr13 30559431 30559471 -89724841 + B4A SINE B4 235 287 -5 9 818 708 12 0 0 chr13 30559879 30559960 -89724352 + (TTC)n Simple_repeat Simple_repeat 2 82 0 9 818 6913 58 4 0 chr13 30559986 30560791 -89723521 - L1_Mus1 LINE L1 -3 6564 5757 9 818 249 57 0 0 chr13 30561516 30561551 -89722761 + (T)n Simple_repeat Simple_repeat 1 35 0 9 818 277 288 27 0 chr13 30562281 30562354 -89721958 - ID4 SINE ID -2 81 7 9 818 1142 80 0 0 chr13 30562397 30562534 -89721778 + B1_Mus2 SINE Alu 1 137 -10 9 818 226 264 111 0 chr13 30562835 30562907 -89721405 - LTR16C LTR ERVL -12 477 398 9 818 308 310 56 0 chr13 30562934 30563005 -89721307 + RSINE1 SINE B4 74 148 -17 9 818 279 424 28 59 chr13 30563061 30563314 -89720998 - LTR16C LTR ERVL -98 391 147 9 818 911 182 7 0 chr13 30563724 30563867 -89720445 + B1_Mur4 SINE Alu 1 144 -6 1 818 432 37 0 0 chr13 30565461 30565515 -89718797 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 818 426 20 0 0 chr13 30565515 30565565 -89718747 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 818 894 184 7 0 chr13 30565645 30565786 -89718526 - B1_Mur4 SINE Alu -8 142 1 1 818 240 59 0 0 chr13 30567306 30567340 -89716972 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 818 955 8 48 0 chr13 30567346 30567470 -89716842 + (GGGAGA)n Simple_repeat Simple_repeat 3 132 0 1 818 276 186 0 0 chr13 30567548 30567607 -89716705 + CT-rich Low_complexity Low_complexity 4 62 0 1 818 196 131 21 21 chr13 30567618 30567665 -89716647 + CT-rich Low_complexity Low_complexity 2 48 0 1 818 195 287 75 0 chr13 30567960 30568054 -89716258 - MIR3 SINE MIR -18 190 90 1 818 240 294 43 99 chr13 30568148 30568310 -89716002 + MLT1D LTR MaLR 14 166 -339 1 818 1901 284 49 74 chr13 30568310 30569170 -89715142 + Lx8 LINE L1 6634 7471 -2 1 818 257 234 13 25 chr13 30569559 30569638 -89714674 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 818 519 31 0 0 chr13 30569978 30570043 -89714269 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 818 2647 222 125 97 chr13 30571885 30572954 -89711358 - RMER12 LTR ERVK -155 1417 1 1 818 1989 236 36 152 chr13 30573483 30574174 -89710138 - RMER19C LTR ERVK 0 611 1 1 818 386 148 42 36 chr13 30574629 30574797 -89709515 + (TA)n Simple_repeat Simple_repeat 2 170 0 1 818 532 0 29 0 chr13 30575732 30575800 -89708512 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 818 450 0 0 0 chr13 30576038 30576088 -89708224 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 818 2199 172 32 0 chr13 30576585 30576956 -89707356 + Lx9 LINE L1 6977 7359 -285 1 818 296 64 0 21 chr13 30577114 30577162 -89707150 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 818 1262 28 7 14 chr13 30577162 30577308 -89707004 - B1_Mm SINE Alu -2 145 1 1 818 2007 138 55 49 chr13 30577407 30577706 -89706606 - ORR1B2 LTR MaLR 0 367 56 1 818 1886 103 0 55 chr13 30577706 30577995 -89706317 - L1Md_F2 LINE L1 -1 6581 6309 1 818 2007 138 55 49 chr13 30577995 30578060 -89706252 - ORR1B2 LTR MaLR -312 55 1 1 818 288 303 60 18 chr13 30578263 30578431 -89705881 - MER53 DNA hAT -16 177 3 1 818 446 189 38 30 chr13 30578556 30578687 -89705625 + Lx9 LINE L1 7480 7611 -33 1 818 26067 3 0 0 chr13 30578990 30582554 -89701758 - L1Md_A LINE L1 0 6582 3019 1 818 313 300 0 43 chr13 30582659 30582753 -89701559 + MER20 DNA MER1_type 128 217 -2 1 818 341 274 69 0 chr13 30584938 30585040 -89699272 + PB1D10 SINE Alu 1 109 -8 1 818 2282 146 38 3 chr13 30585201 30585572 -89698740 + ORR1B1 LTR MaLR 4 387 -7 1 818 1806 117 181 19 chr13 30587303 30587617 -89696695 + ORR1B2 LTR MaLR 1 365 -2 1 818 823 162 49 55 chr13 30587619 30587802 -89696510 + ORR1B2-int LTR MaLR 1327 1508 -1 1 818 1765 190 108 12 chr13 30587803 30588138 -89696174 + ORR1B2 LTR MaLR 1 367 0 1 818 352 217 0 0 chr13 30590084 30590144 -89694168 + ID4 SINE ID 13 72 -11 1 818 3661 23 5 0 chr13 30591114 30591508 -89692804 - MTA_Mm LTR MaLR 0 396 1 1 818 9767 36 2 1 chr13 30591508 30592605 -89691707 - MTA_Mm-int LTR MaLR 0 1098 1 1 818 3635 28 5 0 chr13 30592605 30592999 -89691313 - MTA_Mm LTR MaLR 0 396 1 1 818 225 0 0 0 chr13 30594320 30594345 -89689967 + (CCTG)n Simple_repeat Simple_repeat 2 26 0 1 818 619 262 159 10 chr13 30595019 30595227 -89689085 - Lx8 LINE L1 -28 7445 7207 1 818 1167 209 104 181 chr13 30595230 30595527 -89688785 + RMER2 LTR ERV1 2 253 -314 1 818 1200 76 0 0 chr13 30595527 30595672 -89688640 - B1_Mus1 SINE Alu -3 145 1 1 818 1167 209 104 181 chr13 30595672 30595987 -89688325 + RMER2 LTR ERV1 254 567 0 1 818 1967 286 107 10 chr13 30595994 30597055 -89687257 - L1_Mur3 LINE L1 -684 5613 4416 1 818 1261 291 51 93 chr13 30597056 30597522 -89686790 - L1_Rod LINE L1 -184 5663 5227 1 818 425 247 103 64 chr13 30597522 30597678 -89686634 - RSINE1 SINE B4 0 165 4 1 818 1261 291 51 93 chr13 30597678 30598036 -89686276 - L1_Rod LINE L1 -621 5226 4874 1 818 38 0 0 0 chr13 30599356 30599394 -89684918 + AT_rich Low_complexity Low_complexity 1 38 0 1 818 480 35 0 0 chr13 30599949 30600007 -89684305 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 818 628 81 0 0 chr13 30600020 30600106 -89684206 - L1_Mus2 LINE L1 -1 6565 6480 1 818 1450 34 6 0 chr13 30600106 30600281 -89684031 + L1_Mus1 LINE L1 6212 6387 -180 1 818 5831 192 54 22 chr13 30600302 30601009 -89683303 - Lx5 LINE L1 -7 7043 6309 1 818 2311 115 38 0 chr13 30601009 30601323 -89682989 - ORR1A3 LTR MaLR 0 326 1 1 818 5831 192 54 22 chr13 30601323 30601821 -89682491 - Lx5 LINE L1 -742 6308 5800 1 818 2455 148 0 10 chr13 30601822 30602212 -89682100 + L1_Mur2 LINE L1 4650 5035 -842 1 818 1579 215 27 49 chr13 30602636 30602765 -89681547 + RLTR40 LTR ERVK 459 583 -234 1 818 1850 217 43 3 chr13 30602765 30603134 -89681178 - ORR1C2 LTR MaLR 0 384 1 1 818 1579 215 27 49 chr13 30603134 30603371 -89680941 + RLTR40 LTR ERVK 584 817 0 1 818 575 208 116 14 chr13 30604028 30604174 -89680138 - Lx7 LINE L1 -1702 5942 5782 1 818 516 203 271 5 chr13 30604178 30604381 -89679931 - Lx5 LINE L1 -255 5622 5366 1 818 327 269 10 51 chr13 30604696 30604794 -89679518 - PB1D10 SINE Alu -6 111 18 1 818 366 42 0 0 chr13 30605967 30606015 -89678297 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 818 594 303 65 10 chr13 30606644 30606844 -89677468 + B3 SINE B2 6 216 0 1 818 273 57 0 0 chr13 30606945 30606980 -89677332 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 818 22 0 0 0 chr13 30607033 30607055 -89677257 + AT_rich Low_complexity Low_complexity 1 22 0 1 818 835 249 20 78 chr13 30607802 30607943 -89676369 - MTD LTR MaLR -138 281 158 1 818 2533 66 119 11 chr13 30607943 30608295 -89676017 + RLTR10 LTR ERVK 1 390 0 1 818 835 249 20 78 chr13 30608295 30608449 -89675863 - MTD LTR MaLR -262 157 3 1 818 6890 150 77 29 chr13 30608590 30609857 -89674455 + Lx3C LINE L1 5648 6974 -2 1 818 680 174 24 12 chr13 30610508 30610677 -89673635 + (TATG)n Simple_repeat Simple_repeat 2 172 0 1 818 569 301 67 5 chr13 30610677 30610860 -89673452 - B3A SINE B2 -15 201 8 1 818 474 18 0 0 chr13 30611720 30611775 -89672537 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 818 226 341 12 12 chr13 30611894 30611977 -89672335 - MER5A DNA MER1_type -106 83 1 1 818 247 118 0 0 chr13 30611979 30612013 -89672299 - Lx4A LINE L1 -201 6857 6824 1 818 347 56 0 36 chr13 30612015 30612071 -89672241 + Lx4A LINE L1 7005 7058 0 1 818 1137 65 0 0 chr13 30612082 30612221 -89672091 + B1_Mus1 SINE Alu 5 143 -5 1 818 183 114 0 0 chr13 30612221 30612256 -89672056 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 818 339 44 0 0 chr13 30612338 30612383 -89671929 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 818 338 298 61 9 chr13 30612395 30612510 -89671802 - RSINE1 SINE B4 -29 136 16 1 818 326 266 138 15 chr13 30612620 30612750 -89671562 + B1_Mur2 SINE Alu 1 146 -3 1 818 337 39 0 38 chr13 30612755 30612808 -89671504 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1 818 402 21 0 0 chr13 30613978 30614025 -89670287 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 818 3251 102 4 6 chr13 30614061 30614536 -89669776 - Lx3A LINE L1 -2 6979 6506 1 818 1629 188 38 27 chr13 30614697 30615064 -89669248 - ORR1D1 LTR MaLR -1 373 3 1 818 1113 202 154 10 chr13 30617159 30617464 -89666848 - ORR1E LTR MaLR -2 357 9 1 818 929 260 44 113 chr13 30617573 30617980 -89666332 - MTE2a LTR MaLR 0 379 1 1 818 236 258 100 30 chr13 30618611 30618711 -89665601 + L1M5 LINE L1 5552 5658 -466 1 818 21 0 0 0 chr13 30618870 30618891 -89665421 + AT_rich Low_complexity Low_complexity 1 21 0 1 818 186 103 0 0 chr13 30619421 30619450 -89664862 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 818 340 167 40 27 chr13 30619875 30619949 -89664363 - ID4_ SINE ID -7 76 2 1 818 561 227 127 15 chr13 30620274 30620408 -89663904 + B1_Mur1 SINE Alu 1 149 0 1 818 538 262 9 1 chr13 30620785 30620926 -89663386 + B1F1 SINE Alu 2 149 0 1 818 298 377 32 0 chr13 30621884 30622038 -89662274 - MIRb SINE MIR -59 209 51 1 818 1167 56 0 0 chr13 30622134 30622276 -89662036 + B1_Mus1 SINE Alu 2 143 -5 1 818 524 221 8 17 chr13 30623134 30623280 -89661032 + L1M2 LINE L1 4542 4695 -1451 1 818 4985 133 25 6 chr13 30623712 30624556 -89659756 + Lx5 LINE L1 3798 4657 -1220 1 818 4753 158 26 86 chr13 30624565 30625785 -89658527 + Lx5 LINE L1 5204 6433 -617 1 818 1001 37 22 0 chr13 30625785 30625921 -89658391 - B1_Mus1 SINE Alu 0 148 10 1 818 4753 158 26 86 chr13 30625921 30626137 -89658175 + Lx5 LINE L1 6434 6652 -398 1 818 1937 159 39 0 chr13 30626153 30626487 -89657825 - L1_Mur2 LINE L1 -712 5165 4819 1 818 1349 147 40 9 chr13 30627037 30627376 -89656936 - BGLII_B LTR ERVK -64 358 3 1 818 358 119 34 0 chr13 30627430 30627489 -89656823 + MTC LTR MaLR 1 61 -360 1 818 7139 56 0 1 chr13 30627489 30628361 -89655951 + L1Md_F2 LINE L1 4716 5586 -297 1 818 8281 43 4 1 chr13 30628362 30629354 -89654958 + L1Md_F2 LINE L1 5588 6582 0 1 818 1527 165 127 9 chr13 30629354 30629678 -89654634 + MTC LTR MaLR 49 410 -11 1 818 272 174 42 32 chr13 30630410 30630507 -89653805 - ORR1E LTR MaLR -284 110 14 1 818 306 0 0 0 chr13 30630556 30630590 -89653722 + (T)n Simple_repeat Simple_repeat 1 34 0 1 818 23 0 0 0 chr13 30631689 30631712 -89652600 + AT_rich Low_complexity Low_complexity 1 23 0 1 818 289 295 95 0 chr13 30632043 30632138 -89652174 + B1F1 SINE Alu 1 104 -45 1 818 21 36 0 0 chr13 30633664 30633692 -89650620 + AT_rich Low_complexity Low_complexity 1 28 0 1 818 236 261 15 7 chr13 30634053 30634188 -89650124 + ORR1B1-int LTR MaLR 619 754 -755 1 818 1075 43 0 0 chr13 30634087 30634228 -89650084 + B1_Mus2 SINE Alu 7 147 0 1 818 324 120 0 0 chr13 30634228 30634278 -89650034 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 1 818 21 0 0 0 chr13 30634685 30634706 -89649606 + AT_rich Low_complexity Low_complexity 1 21 0 1 818 305 247 26 0 chr13 30635749 30635826 -89648486 + PB1D10 SINE Alu 34 112 -5 1 818 205 279 62 12 chr13 30636514 30636594 -89647718 - MIRb SINE MIR -20 248 165 1 818 270 0 0 0 chr13 30637594 30637624 -89646688 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1 818 243 0 0 0 chr13 30637818 30637845 -89646467 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 818 358 286 69 12 chr13 30637909 30638082 -89646230 + MER113 DNA MER1_type 91 273 -248 2 818 281 210 122 12 chr13 30638273 30638355 -89645957 + MLT1D LTR MaLR 408 498 -7 2 818 425 279 108 0 chr13 30639099 30639228 -89645084 - RSINE1 SINE B4 -19 146 4 2 818 515 301 29 54 chr13 30639238 30639477 -89644835 - MLT1A1 LTR MaLR -28 380 148 2 818 888 215 9 103 chr13 30640231 30640464 -89643848 - B3 SINE B2 -5 211 1 2 818 3184 159 161 139 chr13 30641047 30641930 -89642382 + RMER19B LTR ERVK 1 902 0 2 818 842 285 62 13 chr13 30642260 30642569 -89641743 + RMER5 LTR ERV1 200 523 -11 2 818 207 0 0 0 chr13 30642577 30642600 -89641712 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 2 818 827 260 10 5 chr13 30643379 30643588 -89640724 - B3 SINE B2 0 216 7 2 818 334 292 30 30 chr13 30643770 30643904 -89640408 + L1MB3 LINE L1 5815 5948 -235 2 818 1858 288 114 105 chr13 30644011 30645199 -89639113 + L1M2 LINE L1 2716 4023 -2120 2 818 329 181 169 0 chr13 30645199 30645282 -89639030 - B3 SINE B2 -6 210 114 2 818 1858 288 114 105 chr13 30645282 30646044 -89638268 + L1M2 LINE L1 4024 4864 -1279 2 818 415 274 12 0 chr13 30646069 30646233 -89638079 + CT-rich Low_complexity Low_complexity 2 167 0 2 818 372 240 48 0 chr13 30646233 30646337 -89637975 + L1M2 LINE L1 4827 4935 -912 2 818 1157 185 34 4 chr13 30646345 30646578 -89637734 + Lx9 LINE L1 7025 7264 -380 2 818 1316 314 18 29 chr13 30646806 30647294 -89637018 - Lx8 LINE L1 -183 7290 6808 2 818 225 211 101 38 chr13 30647390 30647469 -89636843 + L1M5 LINE L1 3560 3643 -2503 2 818 317 273 50 0 chr13 30647852 30647951 -89636361 + L1M5 LINE L1 5326 5429 -695 2 818 427 182 0 0 chr13 30649394 30649460 -89634852 - tRNA-Lys-AAG tRNA tRNA -10 66 1 2 818 251 187 21 32 chr13 30650293 30650387 -89633925 + CT-rich Low_complexity Low_complexity 3 95 0 2 818 244 265 15 0 chr13 30650870 30650938 -89633374 + (TAAA)n Simple_repeat Simple_repeat 1 69 0 2 818 1258 175 14 0 chr13 30652429 30652652 -89631660 + URR1A DNA MER1_type 1 226 0 2 818 205 156 0 0 chr13 30654218 30654250 -89630062 + CT-rich Low_complexity Low_complexity 1 32 0 2 818 1192 309 47 29 chr13 30654440 30654890 -89629422 + Lx8 LINE L1 7011 7468 -5 2 818 241 267 149 41 chr13 30655735 30655856 -89628456 + LTR40b LTR ERVL 230 363 -99 2 818 308 330 58 16 chr13 30656401 30656592 -89627720 - MIR SINE MIR -32 230 32 2 818 203 254 201 44 chr13 30656984 30657119 -89627193 + MIR3 SINE MIR 27 175 -33 2 818 399 119 0 0 chr13 30657373 30657440 -89626872 + (TTTTC)n Simple_repeat Simple_repeat 5 71 0 2 818 2673 228 33 25 chr13 30657440 30658078 -89626234 - RMER1C Other Other 0 1342 700 2 818 1322 285 20 0 chr13 30658086 30658433 -89625879 + RMER1C Other Other 426 779 -563 2 818 453 290 43 58 chr13 30659627 30659748 -89624564 - RSINE1 SINE B4 -19 146 27 2 818 2112 116 137 68 chr13 30659748 30660192 -89624120 + IAPLTR2_Mm LTR ERVK 1 475 0 2 818 453 290 43 58 chr13 30660192 30660209 -89624103 - RSINE1 SINE B4 -139 26 10 2 818 374 235 10 0 chr13 30660437 30660539 -89623773 + CT-rich Low_complexity Low_complexity 1 103 0 2 818 563 302 109 35 chr13 30660539 30660796 -89623516 - B4A SINE B4 -12 280 5 2 818 26 30 0 0 chr13 30661029 30661062 -89623250 + AT_rich Low_complexity Low_complexity 1 33 0 2 818 998 227 144 10 chr13 30662575 30662887 -89621425 - MTD LTR MaLR -14 405 52 2 818 275 318 17 70 chr13 30663100 30663215 -89621097 - MER45A DNA Tip100 -22 156 48 2 818 269 271 26 67 chr13 30664024 30664231 -89620081 - Lx8 LINE L1 -1568 5905 5695 2 818 1967 68 0 0 chr13 30664253 30664504 -89619808 + Lx LINE L1 6282 6532 -122 2 818 269 294 38 89 chr13 30664642 30664799 -89619513 + MIR SINE MIR 112 267 -1 2 818 303 108 30 30 chr13 30665449 30665516 -89618796 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 2 818 392 37 19 0 chr13 30665536 30665590 -89618722 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 2 818 653 153 8 0 chr13 30665653 30665777 -89618535 + CT-rich Low_complexity Low_complexity 4 128 0 2 818 557 147 0 31 chr13 30666443 30666541 -89617771 + B1_Mus2 SINE Alu 53 147 0 2 818 226 304 0 0 chr13 30666679 30666735 -89617577 - ID4 SINE ID -25 58 3 2 818 768 179 186 30 chr13 30667919 30668042 -89616270 + Lx9 LINE L1 7355 7477 -167 2 818 579 66 0 0 chr13 30668042 30668118 -89616194 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 818 768 179 186 30 chr13 30668118 30668230 -89616082 + Lx9 LINE L1 7478 7626 -18 2 818 217 150 48 32 chr13 30668237 30668299 -89616013 + (TTATA)n Simple_repeat Simple_repeat 4 66 0 2 818 315 161 0 0 chr13 30669940 30669996 -89614316 + CT-rich Low_complexity Low_complexity 2 57 0 2 818 227 329 0 0 chr13 30669996 30670069 -89614243 + T-rich Low_complexity Low_complexity 3 75 0 2 818 1423 261 42 70 chr13 30670097 30670644 -89613668 - RMER5 LTR ERV1 0 534 3 2 102 810 287 52 7 chr13 30670689 30670959 -89613353 + RMER5 LTR ERV1 78 359 -175 2 819 525 51 63 0 chr13 30672018 30672097 -89612215 + L1_Mus2 LINE L1 6482 6565 -1 2 819 1331 75 27 11 chr13 30672466 30672654 -89611658 - L1_Mus1 LINE L1 0 6567 6377 2 819 1107 189 14 19 chr13 30672900 30673110 -89611202 - B3 SINE B2 -7 209 1 2 819 696 264 24 34 chr13 30673558 30673766 -89610546 + B3 SINE B2 5 210 -6 2 819 347 247 12 12 chr13 30673978 30674060 -89610252 + ID4 SINE ID 1 82 -1 2 819 225 267 17 0 chr13 30674705 30674765 -89609547 + B1F2 SINE Alu 3 63 -86 2 819 212 257 56 28 chr13 30674858 30674930 -89609382 + ID2 SINE ID 2 75 -8 2 819 513 0 0 0 chr13 30675849 30675906 -89608406 + (GA)n Simple_repeat Simple_repeat 1 57 0 2 819 28 29 0 0 chr13 30676496 30676531 -89607781 + AT_rich Low_complexity Low_complexity 1 35 0 2 819 744 176 36 7 chr13 30676537 30676674 -89607638 - B3 SINE B2 -12 204 64 2 819 553 59 116 12 chr13 30676832 30676918 -89607394 - 5S rRNA rRNA -26 95 1 2 819 1000 211 27 9 chr13 30676922 30677142 -89607170 - URR1A DNA MER1_type -2 224 1 2 819 260 253 160 0 chr13 30677197 30677272 -89607040 + PB1 SINE Alu 37 123 -4 2 819 982 96 159 6 chr13 30677278 30677435 -89606877 + B2_Mm2 SINE B2 1 181 -14 2 819 513 0 0 0 chr13 30678437 30678494 -89605818 + (GA)n Simple_repeat Simple_repeat 1 57 0 2 819 22 0 0 0 chr13 30679414 30679436 -89604876 + AT_rich Low_complexity Low_complexity 1 22 0 2 819 2195 123 6 3 chr13 30679552 30679878 -89604434 - ORR1A2 LTR MaLR 0 327 1 2 819 1512 305 83 28 chr13 30679905 30680356 -89603956 - Lx9 LINE L1 -755 6889 6410 2 819 189 0 0 0 chr13 30680356 30680377 -89603935 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 2 819 1512 305 83 28 chr13 30680377 30680596 -89603716 - Lx9 LINE L1 -1235 6409 6182 2 819 2502 147 94 15 chr13 30680644 30680981 -89603331 + RMER1A Other Other 525 871 -159 2 819 495 0 0 0 chr13 30680981 30681036 -89603276 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 819 2502 147 94 15 chr13 30681036 30681154 -89603158 + RMER1A Other Other 872 1016 -14 2 819 192 125 0 0 chr13 30681154 30681186 -89603126 + (CAGAGA)n Simple_repeat Simple_repeat 2 33 0 2 819 1460 160 61 88 chr13 30681186 30681563 -89602749 + ORR1C2 LTR MaLR 17 383 -1 2 819 1553 247 252 20 chr13 30681620 30682535 -89601777 - Lx9 LINE L1 -1618 6026 4862 2 819 4234 201 55 17 chr13 30682499 30683389 -89600923 + Lx7 LINE L1 5872 6795 -901 2 819 279 0 0 0 chr13 30683389 30683420 -89600892 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 819 1306 226 91 28 chr13 30683431 30683795 -89600517 + Lx7 LINE L1 7116 7502 -194 2 819 249 109 0 0 chr13 30683812 30683858 -89600454 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 819 605 263 17 96 chr13 30683948 30684188 -89600124 - Lx9 LINE L1 -937 4910 4690 2 819 1090 108 210 5 chr13 30684302 30684488 -89599824 + URR1A DNA MER1_type 3 226 0 2 819 747 169 0 8 chr13 30685493 30685624 -89598688 + B3 SINE B2 1 130 -86 2 819 978 278 12 0 chr13 30687270 30687515 -89596797 + B4A SINE B4 29 276 -16 2 819 258 32 0 0 chr13 30687720 30687751 -89596561 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2 819 881 262 19 9 chr13 30687893 30688105 -89596207 + B3 SINE B2 2 215 -1 2 819 1723 16 5 0 chr13 30688469 30688661 -89595651 + B2_Mm1t SINE B2 1 193 0 2 819 480 96 0 46 chr13 30689020 30689129 -89595183 + (TCTCTG)n Simple_repeat Simple_repeat 2 105 0 2 819 4726 59 2 10 chr13 30689161 30689756 -89594556 + L1_Mus1 LINE L1 5978 6567 0 2 819 626 0 0 13 chr13 30689777 30689852 -89594460 + (GAAA)n Simple_repeat Simple_repeat 4 77 0 2 819 756 33 0 0 chr13 30689891 30689982 -89594330 + (TTC)n Simple_repeat Simple_repeat 2 92 0 2 819 1511 45 0 6 chr13 30689982 30690161 -89594151 - B2_Mm1a SINE B2 -14 179 2 2 819 915 109 0 0 chr13 30690161 30690299 -89594013 + (TTC)n Simple_repeat Simple_repeat 2 139 0 2 819 321 89 0 0 chr13 30690299 30690344 -89593968 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 2 819 1093 82 7 0 chr13 30690346 30690493 -89593819 - B1_Mus1 SINE Alu 0 148 1 2 819 378 0 0 0 chr13 30691281 30691323 -89592989 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 819 258 328 82 7 chr13 30691341 30691476 -89592836 - B1F SINE Alu -1 148 4 2 819 295 182 18 0 chr13 30691622 30691677 -89592635 - Lx9 LINE L1 -215 7429 7374 2 819 1244 306 27 15 chr13 30693135 30693540 -89590772 - MERVL-int LTR ERVL -1423 4062 3653 2 819 899 257 117 13 chr13 30693594 30693929 -89590383 + MTD LTR MaLR 13 405 -14 2 819 1196 232 21 4 chr13 30693937 30694175 -89590137 - MERVL-int LTR ERVL -2117 3597 3356 2 819 215 328 39 39 chr13 30695183 30695310 -89589002 - MIRb SINE MIR -27 241 115 2 819 422 265 199 0 chr13 30696762 30696943 -89587369 + Tigger7 DNA MER2_type 2270 2486 -5 2 819 375 60 0 0 chr13 30697920 30697970 -89586342 + (TCTG)n Simple_repeat Simple_repeat 1 50 0 2 819 607 108 10 10 chr13 30698154 30698257 -89586055 + (TTCC)n Simple_repeat Simple_repeat 4 106 0 2 819 22 0 0 0 chr13 30698847 30698869 -89585443 + AT_rich Low_complexity Low_complexity 1 22 0 2 819 204 149 0 0 chr13 30698897 30698944 -89585368 + (T)n Simple_repeat Simple_repeat 1 47 0 3 819 333 82 0 0 chr13 30699683 30699732 -89584580 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 819 853 294 43 14 chr13 30699893 30700173 -89584139 + B4 SINE B4 3 290 -2 3 819 203 156 0 0 chr13 30700175 30700207 -89584105 + A-rich Low_complexity Low_complexity 5 36 0 3 819 896 39 77 15 chr13 30700864 30700994 -89583318 + B1_Mus2 SINE Alu 10 147 0 3 819 465 19 0 0 chr13 30701227 30701281 -89583031 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 819 785 228 109 4 chr13 30701301 30701530 -89582782 - MLT1B LTR MaLR -130 260 8 3 819 1494 119 4 0 chr13 30702109 30702336 -89581976 - L1Md_F2 LINE L1 -1 6581 6354 3 819 2627 42 0 7 chr13 30702338 30702648 -89581664 + L1Md_F2 LINE L1 6061 6368 -214 3 819 2509 96 29 0 chr13 30702787 30703171 -89581141 - MTB LTR MaLR 0 400 6 3 819 548 289 142 53 chr13 30703560 30703949 -89580363 + MLT1C LTR MaLR 1 378 -12 3 819 337 70 35 0 chr13 30704425 30704482 -89579830 + (TCC)n Simple_repeat Simple_repeat 2 60 0 3 819 483 288 65 5 chr13 30705010 30705209 -89579103 + L1MA4 LINE L1 5725 5935 -365 3 819 252 0 0 0 chr13 30705253 30705281 -89579031 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 819 327 25 0 0 chr13 30705482 30705522 -89578790 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 819 380 303 13 0 chr13 30706025 30706180 -89578132 + CT-rich Low_complexity Low_complexity 1 157 0 3 819 2314 174 141 21 chr13 30707057 30707569 -89576743 + RMER15 LTR ERVL 3 575 0 3 819 24 53 0 0 chr13 30707952 30707990 -89576322 + AT_rich Low_complexity Low_complexity 1 38 0 3 819 30 0 0 0 chr13 30708005 30708035 -89576277 + AT_rich Low_complexity Low_complexity 1 30 0 3 819 5018 71 11 8 chr13 30708041 30708695 -89575617 - L1Md_F2 LINE L1 -1 6581 5926 3 819 1972 291 55 14 chr13 30708721 30709358 -89574954 + Lx8 LINE L1 6462 7124 -349 3 819 3585 214 112 12 chr13 30709627 30710430 -89573882 + Lx5 LINE L1 6161 7043 -7 3 819 398 233 66 11 chr13 30710515 30710606 -89573706 - PB1D10 SINE Alu -6 111 16 3 819 238 308 8 17 chr13 30711036 30711155 -89573157 + (CATATA)n Simple_repeat Simple_repeat 2 119 0 3 819 1035 170 0 0 chr13 30711921 30712253 -89572059 + GA-rich Low_complexity Low_complexity 1 332 0 3 819 1192 318 60 2 chr13 30712361 30712874 -89571438 - L1MB7 LINE L1 -8 6176 5634 3 819 2263 235 99 15 chr13 30712899 30713503 -89570809 - Lx8 LINE L1 -2 7471 6817 3 819 367 200 0 39 chr13 30713604 30713682 -89570630 - L1_Rod LINE L1 -973 4874 4800 3 819 577 240 102 74 chr13 30713731 30714055 -89570257 - L1MB7 LINE L1 -598 5586 5254 3 819 222 299 65 0 chr13 30714275 30714352 -89569960 + B1F1 SINE Alu 1 82 -67 3 819 246 32 0 0 chr13 30714427 30714458 -89569854 + (TATG)n Simple_repeat Simple_repeat 2 32 0 3 819 408 20 0 0 chr13 30714495 30714544 -89569768 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 3 819 454 44 44 0 chr13 30714567 30714635 -89569677 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 3 819 555 53 0 0 chr13 30714666 30714741 -89569571 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 819 1041 165 92 10 chr13 30714749 30714945 -89569367 + B3 SINE B2 5 216 0 3 819 1593 274 89 62 chr13 30714953 30715922 -89568390 - L1MB7 LINE L1 -1085 5061 4067 3 819 746 206 103 31 chr13 30716137 30716398 -89567914 - Lx9 LINE L1 -2 7642 7363 3 819 609 292 137 35 chr13 30716445 30716789 -89567523 - L1MB7 LINE L1 -2357 3786 3408 3 819 1175 214 150 3 chr13 30717458 30717772 -89566540 - ORR1D2 LTR MaLR -7 363 4 3 819 404 91 0 15 chr13 30718036 30718103 -89566209 + (TTCC)n Simple_repeat Simple_repeat 4 69 0 3 819 432 0 0 0 chr13 30718167 30718215 -89566097 + (TTA)n Simple_repeat Simple_repeat 2 49 0 3 819 276 274 8 124 chr13 30718664 30718785 -89565527 - L1MC4 LINE L1 -11 8031 7925 3 819 1464 72 0 20 chr13 30719383 30719581 -89564731 - B2_Mm2 SINE B2 0 195 2 3 819 200 34 0 33 chr13 30719708 30719738 -89564574 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 819 273 98 0 0 chr13 30719909 30719950 -89564362 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 3 819 339 309 0 11 chr13 30719951 30720046 -89564266 - PB1D10 SINE Alu -3 114 21 3 819 453 293 45 67 chr13 30719971 30720150 -89564162 - ID_B1 SINE B4 -48 176 2 3 819 225 0 0 0 chr13 30720156 30720181 -89564131 + (T)n Simple_repeat Simple_repeat 1 25 0 3 819 335 278 60 9 chr13 30720647 30720763 -89563549 + MIR3 SINE MIR 60 181 -27 3 819 35 101 0 0 chr13 30722964 30723083 -89561229 + AT_rich Low_complexity Low_complexity 1 119 0 3 819 648 289 26 35 chr13 30725449 30725675 -89558637 + ID_B1 SINE B4 1 224 0 3 819 189 0 0 0 chr13 30725796 30725817 -89558495 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 819 215 196 43 0 chr13 30726012 30726058 -89558254 - B1F SINE Alu -93 56 9 3 819 987 206 24 19 chr13 30726336 30726544 -89557768 - B3 SINE B2 -7 209 1 3 819 1189 282 174 33 chr13 30726554 30727534 -89556778 - L1MB4 LINE L1 -2 6178 5050 3 819 863 238 43 14 chr13 30727594 30727803 -89556509 - B3 SINE B2 0 216 2 3 819 558 247 134 0 chr13 30727832 30728018 -89556294 - L1MC1 LINE L1 -28 6305 6095 3 819 322 301 98 0 chr13 30728135 30728268 -89556044 - L1MB4 LINE L1 -1179 4967 4822 3 819 492 314 16 31 chr13 30728399 30728593 -89555719 + ORR1E LTR MaLR 1 191 -168 3 819 452 282 116 14 chr13 30728660 30728937 -89555375 - L1MB4 LINE L1 -1442 4704 4400 3 819 900 116 14 0 chr13 30728938 30729076 -89555236 - B1_Mur3 SINE Alu 0 149 10 3 819 260 271 29 43 chr13 30729080 30729219 -89555093 - L1MB4 LINE L1 -1710 4436 4300 3 819 251 246 0 0 chr13 30729252 30729317 -89554995 + L1M4 LINE L1 4633 4697 -1449 3 819 1431 291 114 82 chr13 30729323 30731136 -89553176 - L1MB4 LINE L1 -1889 4257 2491 3 819 823 243 30 59 chr13 30731150 30731462 -89552850 + RLTR11A2 LTR ERVK 8 286 -167 3 819 277 302 100 47 chr13 30731454 30731624 -89552688 + BGLII_B LTR ERVK 235 413 -28 3 819 1318 79 22 0 chr13 30732222 30732400 -89551912 + B2_Mm2 SINE B2 1 182 -13 3 819 591 71 0 0 chr13 30732400 30732485 -89551827 + (GAAA)n Simple_repeat Simple_repeat 2 86 0 3 819 1181 75 0 0 chr13 30732817 30732963 -89551349 + B1_Mm SINE Alu 1 146 -1 3 819 920 302 64 64 chr13 30733034 30733565 -89550747 + MYSERV-int LTR ERVK 3769 4299 -2251 3 819 273 146 0 0 chr13 30733728 30733776 -89550536 + (GGGA)n Simple_repeat Simple_repeat 2 49 0 3 819 248 264 160 0 chr13 30733839 30733961 -89550351 + L1MC3 LINE L1 7382 7493 -292 3 819 1080 261 74 13 chr13 30734006 30734460 -89549852 + L1MC3 LINE L1 7187 7711 -284 3 819 506 257 46 25 chr13 30734533 30734740 -89549572 - MTEa LTR MaLR 0 379 158 3 819 972 57 101 13 chr13 30734733 30734892 -89549420 + B2_Mm2 SINE B2 23 195 0 3 819 530 124 0 11 chr13 30734898 30734988 -89549324 + (GGGAGA)n Simple_repeat Simple_repeat 5 93 0 3 819 954 256 31 21 chr13 30735089 30735374 -89548938 - MTEa LTR MaLR -93 286 4 3 819 1450 208 130 19 chr13 30735468 30735845 -89548467 + MTD LTR MaLR 1 419 0 3 819 562 232 66 12 chr13 30735853 30736019 -89548293 - L1M4 LINE L1 -1408 4738 4564 3 819 241 205 0 179 chr13 30736046 30736141 -89548171 - MTEb LTR MaLR -15 364 287 3 819 327 107 54 0 chr13 30736489 30736545 -89547767 - L1M4 LINE L1 -1593 4553 4495 3 819 632 186 64 0 chr13 30736553 30736693 -89547619 + RMER19C LTR ERVK 1 149 -462 3 819 2081 267 139 71 chr13 30736734 30737198 -89547114 - L1M3 LINE L1 -2456 3684 3228 3 819 1166 82 0 0 chr13 30737198 30737344 -89546968 - B1_Mus1 SINE Alu 0 148 3 3 819 2081 267 139 71 chr13 30737344 30737739 -89546573 - L1M3 LINE L1 -2913 3227 2818 3 819 256 279 0 0 chr13 30737739 30737800 -89546512 - ID4 SINE ID -19 64 4 3 819 2081 267 139 71 chr13 30737800 30738414 -89545898 - L1M3 LINE L1 -3323 2817 2110 3 819 246 405 86 11 chr13 30739187 30739454 -89544858 - MER47B DNA MER2_type -125 293 7 3 819 336 239 135 11 chr13 30739500 30739589 -89544723 + RSINE1 SINE B4 5 104 -61 3 819 237 293 0 13 chr13 30739665 30739741 -89544571 + L1MCc LINE L1 75 149 -6274 3 819 239 283 0 0 chr13 30739789 30739849 -89544463 + Tigger5 DNA MER2_type 2344 2403 -3 3 819 1151 69 14 0 chr13 30740167 30740312 -89544000 - B1_Mus1 SINE Alu 0 148 2 3 819 350 312 33 78 chr13 30740896 30741049 -89543263 - MLT1B LTR MaLR -239 151 6 3 819 803 154 44 0 chr13 30741985 30742121 -89542191 - B1_Mur4 SINE Alu -8 142 1 3 819 188 398 0 22 chr13 30742584 30742674 -89541638 + L2b LINE L2 3284 3371 -4 3 819 716 157 51 32 chr13 30743500 30743634 -89540678 - RLTR25A LTR ERVK -6 1097 958 3 819 180 97 0 0 chr13 30743634 30743665 -89540647 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 3 819 716 188 53 127 chr13 30743665 30743760 -89540552 - RLTR25A LTR ERVK -146 957 821 3 819 234 0 0 0 chr13 30743760 30743786 -89540526 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 819 603 199 54 158 chr13 30743786 30743872 -89540440 - RLTR25A LTR ERVK -208 820 739 3 819 201 39 0 0 chr13 30743907 30743933 -89540379 + (TAAAAA)n Simple_repeat Simple_repeat 4 29 0 3 819 3299 192 83 30 chr13 30743964 30744774 -89539538 - RLTR25B LTR ERVK -175 853 1 3 819 203 0 0 36 chr13 30745869 30745897 -89538415 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 819 2804 193 191 82 chr13 30746585 30747512 -89536800 + RLTR25B LTR ERVK 1 1028 0 3 819 206 348 0 11 chr13 30747925 30748015 -89536297 + CT-rich Low_complexity Low_complexity 3 91 0 3 819 288 319 30 114 chr13 30748124 30748255 -89536057 + B1_Mus2 SINE Alu 1 120 0 3 819 308 82 20 0 chr13 30748306 30748355 -89535957 + ORR1D1 LTR MaLR 323 372 -2 3 819 513 0 0 0 chr13 30748611 30748668 -89535644 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 819 534 272 88 0 chr13 30750152 30750299 -89534013 - RSINE1 SINE B4 -1 164 5 3 819 213 39 0 0 chr13 30750320 30750346 -89533966 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 819 982 173 0 40 chr13 30750904 30751103 -89533209 - URR1B DNA MER1_type 0 225 35 3 819 215 152 0 0 chr13 30751148 30751181 -89533131 + B1_Mus2 SINE Alu 1 33 -114 3 819 841 70 38 30 chr13 30751181 30751314 -89532998 + B1_Mm SINE Alu 14 147 0 3 819 180 125 0 0 chr13 30751921 30751953 -89532359 + (CCCG)n Simple_repeat Simple_repeat 1 32 0 4 819 352 0 42 0 chr13 30752894 30752942 -89531370 + (TTA)n Simple_repeat Simple_repeat 2 51 0 4 819 261 284 111 20 chr13 30753515 30753713 -89530599 - Charlie5 DNA MER1_type -6 2618 2403 4 819 192 78 19 56 chr13 30754114 30754168 -89530144 + T-rich Low_complexity Low_complexity 3 54 0 4 819 1267 41 0 0 chr13 30754169 30754315 -89529997 - B1_Mm SINE Alu 0 147 2 4 819 304 238 0 0 chr13 30755645 30755708 -89528604 - ID4 SINE ID -19 64 2 4 819 393 194 0 41 chr13 30755709 30755806 -89528506 - PB1D10 SINE Alu 0 117 25 4 819 341 271 44 22 chr13 30757924 30758060 -89526252 + MER2 DNA MER2_type 82 220 -125 4 819 239 316 7 63 chr13 30759347 30759443 -89524869 + MER31B LTR ERV1 333 420 -46 4 819 697 251 40 11 chr13 30759443 30759620 -89524692 - B3A SINE B2 -16 182 1 4 819 239 316 7 63 chr13 30759620 30759665 -89524647 + MER31B LTR ERV1 421 465 -1 4 819 351 278 63 50 chr13 30760726 30760885 -89523427 - L1MB3 LINE L1 -1 6182 6022 4 819 354 246 26 43 chr13 30761375 30761490 -89522822 + L1MB8 LINE L1 6024 6136 -42 4 819 723 330 94 10 chr13 30761597 30761906 -89522406 - MER2 DNA MER2_type -3 342 8 4 819 250 338 67 13 chr13 30762450 30762600 -89521712 - RSINE1 SINE B4 -5 160 3 4 819 462 103 0 0 chr13 30764361 30764439 -89519873 + (TG)n Simple_repeat Simple_repeat 2 79 0 4 819 519 240 71 8 chr13 30764707 30764833 -89519479 + B1F SINE Alu 9 142 -7 4 819 192 125 0 0 chr13 30764833 30764865 -89519447 + (TTAA)n Simple_repeat Simple_repeat 1 32 0 4 819 207 0 0 0 chr13 30768035 30768058 -89516254 + (CTTG)n Simple_repeat Simple_repeat 2 24 0 4 819 1088 241 57 0 chr13 30768641 30768903 -89515409 + B4A SINE B4 1 277 -15 4 819 396 0 0 0 chr13 30769048 30769092 -89515220 + (TC)n Simple_repeat Simple_repeat 2 45 0 4 819 465 34 0 0 chr13 30769092 30769150 -89515162 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 819 342 225 0 66 chr13 30769152 30769228 -89515084 - ID4_ SINE ID -11 72 2 4 819 234 215 46 0 chr13 30769489 30769554 -89514758 - L1MA5 LINE L1 0 6300 6233 4 819 884 243 76 61 chr13 30770521 30770784 -89513528 + B4 SINE B4 18 284 -8 4 819 427 262 37 9 chr13 30771240 30771348 -89512964 - PB1D10 SINE Alu -1 116 6 4 819 320 183 126 21 chr13 30771275 30771370 -89512942 - B4A SINE B4 -118 174 70 4 819 2303 22 7 4 chr13 30772992 30773263 -89511049 + L1Md_F2 LINE L1 6311 6582 0 4 819 1232 130 86 5 chr13 30773445 30773654 -89510658 - URR1A DNA MER1_type 0 226 1 4 819 420 20 0 0 chr13 30773769 30773818 -89510494 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 819 385 217 174 8 chr13 30777206 30777327 -89506985 - B1F SINE Alu -8 141 1 4 819 210 171 0 0 chr13 30778459 30778494 -89505818 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 4 819 1085 234 47 4 chr13 30778495 30778774 -89505538 - Lx9 LINE L1 -127 7517 7227 4 819 909 244 25 21 chr13 30778773 30779012 -89505300 + Lx9 LINE L1 6997 7236 -408 4 819 1137 79 0 0 chr13 30779424 30779564 -89504748 + B1_Mus1 SINE Alu 1 140 -8 4 819 198 0 0 0 chr13 30779564 30779586 -89504726 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 819 292 283 174 6 chr13 30781082 30781249 -89503063 + L1MB3 LINE L1 5951 6145 -38 4 819 217 396 27 9 chr13 30781249 30781361 -89502951 + PB1D10 SINE Alu 3 116 -1 4 819 422 257 26 9 chr13 30781363 30781477 -89502835 + PB1D10 SINE Alu 1 116 -1 4 819 315 218 30 144 chr13 30781485 30781593 -89502719 + BC1_Mm scRNA scRNA 2 97 -55 4 819 691 227 8 0 chr13 30782443 30782571 -89501741 - ID_B1 SINE B4 -2 222 94 4 819 333 0 0 0 chr13 30784939 30784976 -89499336 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 819 181 271 50 17 chr13 30785283 30785343 -89498969 - L4 LINE RTE -1335 694 633 4 819 306 73 0 0 chr13 30786131 30786172 -89498140 + (TCCCC)n Simple_repeat Simple_repeat 1 41 0 4 819 319 152 0 33 chr13 30786862 30786923 -89497389 + B1_Mus1 SINE Alu 2 60 -88 4 819 376 153 12 12 chr13 30786926 30787012 -89497300 + GA-rich Low_complexity Low_complexity 2 87 0 4 819 314 158 75 50 chr13 30787012 30787092 -89497220 + RLTR25B LTR ERVK 428 509 -519 4 819 861 38 0 0 chr13 30787029 30787135 -89497177 + B1_Mus2 SINE Alu 42 147 0 4 819 887 294 34 4 chr13 30788482 30788748 -89495564 + B4A SINE B4 5 278 -14 4 819 307 284 101 15 chr13 30788755 30788916 -89495396 + B4 SINE B4 28 242 -50 4 819 546 268 46 26 chr13 30788931 30789084 -89495228 - RSINE1 SINE B4 -8 157 2 4 819 181 291 158 35 chr13 30790238 30790352 -89493960 + MIRm SINE MIR 22 149 -127 4 819 21 36 0 0 chr13 30791377 30791405 -89492907 + AT_rich Low_complexity Low_complexity 1 28 0 4 819 846 242 18 59 chr13 30791431 30791651 -89492661 - B3 SINE B2 -5 211 1 4 819 255 310 82 104 chr13 30793032 30793247 -89491065 + Charlie18a DNA MER1_type 79 288 -54 4 819 774 60 0 0 chr13 30793247 30793347 -89490965 + (TTTC)n Simple_repeat Simple_repeat 4 103 0 4 819 255 310 82 104 chr13 30793347 30793401 -89490911 + Charlie18a DNA MER1_type 289 342 0 4 819 1836 190 106 8 chr13 30795401 30795768 -89488544 - MTD LTR MaLR -16 403 1 4 819 216 111 0 0 chr13 30796493 30796529 -89487783 + (CTGTG)n Simple_repeat Simple_repeat 4 39 0 4 819 612 239 31 172 chr13 30797627 30797819 -89486493 - ORR1D1 LTR MaLR 0 384 220 4 819 444 314 106 34 chr13 30798266 30798586 -89485726 + MER2 DNA MER2_type 3 345 0 4 819 219 170 0 0 chr13 30799011 30799058 -89485254 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 819 188 302 61 92 chr13 30799217 30799348 -89484964 - MER5B DNA MER1_type -51 127 1 4 819 603 40 0 0 chr13 30801733 30801807 -89482505 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 4 820 1245 54 0 0 chr13 30802182 30802330 -89481982 + B1_Mus1 SINE Alu 1 148 0 4 820 1809 203 57 13 chr13 30805541 30805926 -89478386 + MTD LTR MaLR 18 419 0 4 820 180 315 0 53 chr13 30808512 30808569 -89475743 - MIRb SINE MIR -79 189 136 4 820 623 78 0 11 chr13 30810661 30810752 -89473560 + (TTGG)n Simple_repeat Simple_repeat 2 91 0 4 820 218 292 0 0 chr13 30812510 30812518 -89471794 + (CA)n Simple_repeat Simple_repeat 2 9 0 4 820 354 91 0 0 chr13 30812518 30812573 -89471739 + (CAGA)n Simple_repeat Simple_repeat 4 58 0 4 820 218 292 0 0 chr13 30812573 30812636 -89471676 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 820 249 356 48 30 chr13 30813302 30813635 -89470677 - L1MB7 LINE L1 -31 6153 5815 4 820 516 16 0 0 chr13 30813652 30813713 -89470599 + (TTG)n Simple_repeat Simple_repeat 3 63 0 4 820 437 276 51 26 chr13 30813762 30813918 -89470394 + MER20 DNA MER1_type 5 164 -55 4 820 312 311 154 29 chr13 30814836 30814972 -89469340 + B3A SINE B2 46 198 0 4 820 428 137 19 19 chr13 30814993 30815097 -89469215 + (TA)n Simple_repeat Simple_repeat 2 105 0 4 820 369 0 0 0 chr13 30816536 30816577 -89467735 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 820 333 330 78 9 chr13 30817401 30817517 -89466795 - B3 SINE B2 -5 211 88 4 820 400 102 11 22 chr13 30817545 30817635 -89466677 + (TTTTTG)n Simple_repeat Simple_repeat 1 89 0 4 820 1194 62 0 0 chr13 30817637 30817782 -89466530 - B1_Mus2 SINE Alu 0 147 3 4 820 420 243 58 10 chr13 30817782 30817886 -89466426 - B3A SINE B2 -89 109 1 4 820 28 29 0 0 chr13 30818013 30818048 -89466264 + AT_rich Low_complexity Low_complexity 1 35 0 4 820 418 229 26 44 chr13 30818121 30818235 -89466077 - PB1D10 SINE Alu -3 114 3 4 820 282 115 0 0 chr13 30819031 30819083 -89465229 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 820 312 331 7 14 chr13 30819893 30820031 -89464281 + (CAG)n Simple_repeat Simple_repeat 1 137 0 4 820 255 77 26 0 chr13 30820535 30820574 -89463738 + ID4 SINE ID 3 42 -41 4 820 681 308 64 131 chr13 30821597 30821905 -89462407 + L1MC4a LINE L1 6802 7024 -858 4 820 216 0 0 0 chr13 30821905 30821929 -89462383 + (TAAAA)n Simple_repeat Simple_repeat 5 28 0 4 820 681 308 64 131 chr13 30821929 30822405 -89461907 + L1MC4a LINE L1 7025 7533 -349 4 820 325 212 0 43 chr13 30822525 30822594 -89461718 + PB1D7 SINE Alu 34 99 -21 4 820 261 0 0 0 chr13 30822594 30822623 -89461689 + (TC)n Simple_repeat Simple_repeat 1 29 0 4 820 180 0 0 0 chr13 30822623 30822642 -89461670 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 820 512 30 15 0 chr13 30822642 30822708 -89461604 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 4 820 268 261 0 14 chr13 30823536 30823606 -89460706 + L1MA4 LINE L1 4892 4960 -1183 4 820 34 65 0 0 chr13 30824088 30824150 -89460162 + AT_rich Low_complexity Low_complexity 1 62 0 4 820 1009 290 107 37 chr13 30824187 30825042 -89459270 + L1MA4 LINE L1 4926 5914 -242 4 820 513 0 0 0 chr13 30825057 30825114 -89459198 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 820 916 154 0 11 chr13 30825451 30825628 -89458684 + GA-rich Low_complexity Low_complexity 3 177 0 4 820 314 156 0 15 chr13 30825639 30825704 -89458608 + GA-rich Low_complexity Low_complexity 2 65 0 4 820 200 0 67 0 chr13 30825704 30825734 -89458578 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 820 1007 230 14 14 chr13 30825742 30825958 -89458354 + B3 SINE B2 1 216 0 4 820 670 275 154 21 chr13 30826020 30826453 -89457859 + L1MA8 LINE L1 5593 6103 -197 4 820 847 261 91 3 chr13 30826461 30826757 -89457555 + L1MA8 LINE L1 5815 6136 -155 4 820 255 337 73 77 chr13 30826898 30827171 -89457141 + ORR1E LTR MaLR 86 357 -2 4 820 192 217 0 0 chr13 30827254 30827300 -89457012 + GA-rich Low_complexity Low_complexity 4 49 0 4 820 534 308 77 68 chr13 30827357 30827709 -89456603 + L1M2 LINE L1 5413 5767 -533 4 820 230 290 75 0 chr13 30827709 30827816 -89456496 - Charlie5 DNA MER1_type -2236 388 274 4 820 333 0 0 0 chr13 30827832 30827869 -89456443 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 820 185 226 91 36 chr13 30828841 30828896 -89455416 + MIRm SINE MIR 175 232 -44 5 820 761 278 65 28 chr13 30830693 30830801 -89453511 - MTEa LTR MaLR -75 304 184 5 820 540 42 0 0 chr13 30830801 30830872 -89453440 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 820 351 0 0 0 chr13 30830872 30830910 -89453402 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 820 761 280 85 36 chr13 30830910 30831085 -89453227 - MTEa LTR MaLR -191 188 2 5 820 195 318 44 26 chr13 30834024 30834137 -89450175 + MIRc SINE MIR 96 210 -58 5 820 444 82 0 0 chr13 30835567 30835628 -89448684 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 820 366 305 84 11 chr13 30835727 30835906 -89448406 + RMER12 LTR ERVK 767 958 -364 5 820 244 273 43 54 chr13 30836070 30836163 -89448149 - MLT1A1 LTR MaLR -316 92 1 5 820 568 175 0 30 chr13 30837685 30837785 -89446527 - B4 SINE B4 -195 97 1 5 820 239 306 30 90 chr13 30837852 30837985 -89446327 + MIRc SINE MIR 94 218 -50 5 820 26 30 0 0 chr13 30838299 30838332 -89445980 + AT_rich Low_complexity Low_complexity 1 33 0 5 820 315 0 0 0 chr13 30838353 30838388 -89445924 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 5 820 265 279 15 0 chr13 30838473 30838541 -89445771 - ID4_ SINE ID -10 73 5 5 820 219 69 0 0 chr13 30839586 30839615 -89444697 + (A)n Simple_repeat Simple_repeat 1 29 0 5 820 316 299 11 0 chr13 30839714 30839801 -89444511 + L2a LINE L2 3338 3425 -1 5 820 252 0 0 0 chr13 30842184 30842212 -89442100 + (GGA)n Simple_repeat Simple_repeat 3 30 0 5 820 240 163 0 0 chr13 30845567 30845610 -89438702 + (CTG)n Simple_repeat Simple_repeat 1 43 0 5 820 308 35 69 0 chr13 30845611 30845669 -89438643 + (TGG)n Simple_repeat Simple_repeat 2 63 0 5 820 330 266 234 0 chr13 30846301 30846395 -89437917 - PB1 SINE Alu -5 122 7 5 820 271 268 163 10 chr13 30846685 30846783 -89437529 + MIRb SINE MIR 59 171 -105 5 820 222 125 122 20 chr13 30849913 30849962 -89434350 - B1F SINE Alu 0 149 96 5 820 1267 267 67 56 chr13 30850612 30851179 -89433133 - L1MA8 LINE L1 -42 6249 5677 5 820 218 288 0 0 chr13 30852477 30852536 -89431776 - BC1_Mm scRNA scRNA -70 82 24 5 820 1159 117 61 0 chr13 30854269 30854449 -89429863 + B2_Mm2 SINE B2 2 192 -3 5 820 200 111 0 27 chr13 30858208 30858245 -89426067 + (TTG)n Simple_repeat Simple_repeat 1 36 0 5 820 804 96 0 0 chr13 30858991 30859106 -89425206 + (GA)n Simple_repeat Simple_repeat 2 116 0 5 820 301 149 0 29 chr13 30859106 30859175 -89425137 + GA-rich Low_complexity Low_complexity 3 69 0 5 820 221 167 0 0 chr13 30859316 30859358 -89424954 + T-rich Low_complexity Low_complexity 1 42 0 5 820 626 239 106 22 chr13 30859379 30859559 -89424753 - B3 SINE B2 -16 200 6 5 820 243 0 0 0 chr13 30860246 30860273 -89424039 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 820 324 0 0 0 chr13 30860815 30860851 -89423461 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 820 3966 181 62 10 chr13 30861092 30861997 -89422315 - RMER1A Other Other -2 1064 55 5 820 1838 181 88 11 chr13 30862048 30862421 -89421891 + MTD LTR MaLR 17 418 -1 5 820 350 289 11 57 chr13 30862423 30862599 -89421713 + L1_Mur3 LINE L1 2238 2405 -3475 5 820 287 243 0 0 chr13 30862614 30862688 -89421624 + L1_Mur3 LINE L1 4216 4289 -1591 5 820 219 36 0 0 chr13 30862870 30862898 -89421414 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 820 457 239 26 161 chr13 30862902 30863057 -89421255 - B1_Mur3 SINE Alu -13 136 3 5 820 254 295 87 39 chr13 30862955 30863078 -89421234 - B4 SINE B4 -93 199 71 5 820 1033 291 29 56 chr13 30863078 30863470 -89420842 + MTE2a LTR MaLR 1 372 -47 5 820 212 184 20 0 chr13 30863506 30863555 -89420757 + GA-rich Low_complexity Low_complexity 2 51 0 5 820 1089 171 148 0 chr13 30863747 30863964 -89420348 + Lx5 LINE L1 6802 7050 0 5 820 2744 290 91 98 chr13 30864079 30864934 -89419378 + L1M2 LINE L1 2780 3687 -2456 5 820 613 63 158 8 chr13 30864934 30865061 -89419251 + RMER17B LTR ERVK 312 457 -501 5 820 2744 290 91 98 chr13 30865061 30866551 -89417761 + L1M2 LINE L1 3688 5273 -870 5 820 216 0 0 0 chr13 30866551 30866575 -89417737 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 820 2744 297 99 91 chr13 30866575 30866971 -89417341 + L1M2 LINE L1 5244 5682 -198 5 820 317 245 86 49 chr13 30867014 30867177 -89417135 + RLTR15 LTR ERVK 181 349 -10 5 820 300 111 0 0 chr13 30868489 30868534 -89415778 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5 820 263 93 0 23 chr13 30868531 30868575 -89415737 + (CATA)n Simple_repeat Simple_repeat 2 44 0 5 820 272 333 0 0 chr13 30868656 30868734 -89415578 - MER33 DNA MER1_type -230 94 17 5 820 276 206 71 29 chr13 30869381 30869451 -89414861 - MER91B DNA Tip100 -117 73 1 5 820 1204 306 99 82 chr13 30870174 30871051 -89413261 + Lx8 LINE L1 6582 7473 0 5 820 256 272 142 38 chr13 30871591 30871861 -89412451 + L1MC LINE L1 5356 5659 -520 5 820 341 262 23 0 chr13 30871895 30871993 -89412319 - PB1D10 SINE Alu -41 106 3 5 820 212 0 0 35 chr13 30872180 30872209 -89412103 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 5 820 1127 112 6 0 chr13 30872298 30872477 -89411835 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 5 820 828 0 0 0 chr13 30872478 30872570 -89411742 + (TTCCC)n Simple_repeat Simple_repeat 4 95 0 5 820 201 147 0 0 chr13 30872596 30872630 -89411682 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 5 820 337 252 27 175 chr13 30873351 30873534 -89410778 + RMER15 LTR ERVL 6 161 -414 5 820 413 279 9 9 chr13 30873542 30873654 -89410658 + RMER15 LTR ERVL 302 413 -162 5 820 189 0 0 0 chr13 30873678 30873699 -89410613 + (T)n Simple_repeat Simple_repeat 1 21 0 5 820 1147 313 61 50 chr13 30875181 30875803 -89408509 - L1MB3 LINE L1 -15 6168 5540 5 820 546 43 0 0 chr13 30876156 30876225 -89408087 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 820 258 130 22 0 chr13 30876235 30876281 -89408031 + RMER17C LTR ERVK 226 272 -138 5 820 192 239 39 90 chr13 30876297 30876375 -89407937 + L4 LINE RTE 1367 1440 -589 5 820 213 175 0 0 chr13 30877901 30877941 -89406371 + (CACCC)n Simple_repeat Simple_repeat 1 40 0 5 820 396 0 0 0 chr13 30878826 30878870 -89405442 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 820 262 333 61 0 chr13 30880198 30880297 -89404015 - ORR1E LTR MaLR -249 110 6 5 820 1674 180 40 23 chr13 30880294 30880641 -89403671 + MTD LTR MaLR 9 361 -58 5 820 200 34 0 33 chr13 30880784 30880814 -89403498 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 820 323 270 54 0 chr13 30881418 30881492 -89402820 - PB1D10 SINE Alu -19 98 21 5 820 3070 49 18 15 chr13 30883190 30883585 -89400727 + MTA_Mm LTR MaLR 1 396 0 5 820 396 0 0 0 chr13 30884691 30884735 -89399577 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 820 359 311 98 0 chr13 30884752 30884884 -89399428 + MLT1B LTR MaLR 178 322 -68 5 820 798 11 0 0 chr13 30886354 30886445 -89397867 + (TTTC)n Simple_repeat Simple_repeat 1 91 0 5 820 257 338 0 0 chr13 30886957 30887031 -89397281 - B1F SINE Alu 0 149 76 5 820 978 134 257 0 chr13 30887278 30887457 -89396855 - URR1A DNA MER1_type 0 226 2 5 820 243 0 0 0 chr13 30887897 30887924 -89396388 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 820 5387 16 0 0 chr13 30889433 30890041 -89394271 + L1Md_T LINE L1 4979 5586 -297 5 820 8201 53 0 0 chr13 30890041 30891037 -89393275 + L1Md_T LINE L1 5587 6582 0 5 820 258 356 70 60 chr13 30891280 30891495 -89392817 + B4 SINE B4 54 270 -22 5 820 234 304 0 0 chr13 30891532 30891601 -89392711 + (CA)n Simple_repeat Simple_repeat 1 69 0 5 820 1408 178 312 12 chr13 30892286 30892610 -89391702 - MTC LTR MaLR 0 421 1 5 820 281 284 90 13 chr13 30893177 30893328 -89390984 + MIR SINE MIR 80 237 -25 5 820 382 265 135 8 chr13 30894356 30894489 -89389823 - RMER15 LTR ERVL -1 574 425 5 820 410 358 11 11 chr13 30894532 30894713 -89389599 - Lx8 LINE L1 -258 7215 7035 5 820 838 196 84 44 chr13 30894870 30895121 -89389191 + Lx9 LINE L1 7378 7638 -6 5 820 1827 159 13 9 chr13 30895145 30895463 -89388849 + Lx2B LINE L1 6559 6877 -123 5 820 292 286 142 32 chr13 30895484 30895737 -89388575 - L1MEf LINE L1 -5443 757 477 5 820 204 40 0 0 chr13 30896219 30896244 -89388068 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 5 820 984 271 73 11 chr13 30896419 30896773 -89387539 - MTEb LTR MaLR 0 379 4 5 820 500 274 249 5 chr13 30897135 30897348 -89386964 - MER2 DNA MER2_type 0 345 81 5 820 391 340 28 0 chr13 30897446 30897590 -89386722 - MER2B DNA MER2_type -182 154 7 5 820 712 272 198 18 chr13 30897618 30898108 -89386204 - L1MC1 LINE L1 -11 6322 5745 5 820 780 258 87 7 chr13 30898132 30898421 -89385891 - L1MC1 LINE L1 -1052 5094 4783 5 820 755 221 66 10 chr13 30898500 30898697 -89385615 - B3 SINE B2 -5 211 4 5 820 1073 126 0 6 chr13 30898871 30899047 -89385265 + (TTCC)n Simple_repeat Simple_repeat 2 176 0 5 820 249 33 0 0 chr13 30899061 30899091 -89385221 + (TTCTCC)n Simple_repeat Simple_repeat 5 34 0 5 820 1204 62 0 0 chr13 30899091 30899237 -89385075 - B1_Mus1 SINE Alu -2 146 1 5 820 304 298 196 12 chr13 30900611 30900784 -89383528 + HAL1 LINE L1 1530 1734 -773 5 820 231 291 33 33 chr13 30901003 30901124 -89383188 + HAL1 LINE L1 2238 2358 -149 5 820 761 231 59 20 chr13 30901731 30901934 -89382378 - ID_B1 SINE B4 -5 219 9 5 820 1080 134 209 0 chr13 30902139 30902326 -89381986 + URR1A DNA MER1_type 1 226 0 5 820 469 299 180 0 chr13 30902452 30902696 -89381616 + B4A SINE B4 1 288 -4 5 820 2017 234 117 107 chr13 30903206 30903395 -89380917 + L1_Mur3 LINE L1 2235 2433 -3447 5 820 1613 190 71 39 chr13 30903395 30903801 -89380511 + MTD LTR MaLR 1 419 0 5 820 2017 234 117 107 chr13 30903801 30904706 -89379606 + L1_Mur3 LINE L1 2434 3340 -2540 5 820 1889 191 64 8 chr13 30907314 30907705 -89376607 + MTC LTR MaLR 1 413 -8 6 820 1018 259 120 29 chr13 30907718 30908100 -89376212 - MTD LTR MaLR -2 417 1 6 820 189 107 0 0 chr13 30908569 30908597 -89375715 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 820 235 353 18 64 chr13 30908753 30908862 -89375450 - RSINE1 SINE B4 -32 133 30 6 820 204 40 0 0 chr13 30910182 30910207 -89374105 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 820 313 339 55 0 chr13 30910962 30911145 -89373167 - B3A SINE B2 -5 193 1 6 820 1128 89 0 0 chr13 30911262 30911408 -89372904 + B1_Mus1 SINE Alu 2 147 -1 6 820 420 37 0 0 chr13 30911408 30911462 -89372850 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 6 820 189 0 0 0 chr13 30911678 30911699 -89372613 + (A)n Simple_repeat Simple_repeat 1 21 0 6 820 21 0 0 0 chr13 30912148 30912169 -89372143 + AT_rich Low_complexity Low_complexity 1 21 0 6 820 419 294 222 10 chr13 30912887 30913193 -89371119 + L1M4 LINE L1 4625 4995 -1151 6 820 832 280 67 60 chr13 30913406 30913820 -89370492 + RMER1B Other Other 7 405 -661 6 820 1937 234 34 15 chr13 30913833 30914288 -89370024 + RMER1A Other Other 74 518 -512 6 820 846 229 44 24 chr13 30914748 30914954 -89369358 - B3 SINE B2 -6 210 1 6 820 690 178 44 0 chr13 30915580 30915715 -89368597 + B1_Mur2 SINE Alu 9 149 0 6 820 1448 130 60 15 chr13 30915742 30916007 -89368305 + ORR1A4 LTR MaLR 1 277 -52 6 820 192 77 0 0 chr13 30916007 30916033 -89368279 + (A)n Simple_repeat Simple_repeat 1 26 0 6 820 298 350 20 0 chr13 30916152 30916252 -89368060 + PB1 SINE Alu 6 107 -20 6 820 26 30 0 0 chr13 30916358 30916391 -89367921 + AT_rich Low_complexity Low_complexity 1 33 0 6 820 342 0 0 0 chr13 30916391 30916429 -89367883 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 820 649 278 13 0 chr13 30916445 30916596 -89367716 - RSINE1 SINE B4 0 165 13 6 820 275 276 6 0 chr13 30917567 30917737 -89366575 + (CA)n Simple_repeat Simple_repeat 2 172 0 6 820 799 247 17 6 chr13 30918395 30918574 -89365738 - B3A SINE B2 -16 182 2 6 820 437 263 97 125 chr13 30918610 30918858 -89365454 + B4A SINE B4 9 249 -43 6 820 534 292 0 0 chr13 30919371 30919491 -89364821 - ID_B1 SINE B4 -5 219 100 6 820 224 258 16 0 chr13 30921931 30921993 -89362319 + MIRb SINE MIR 58 120 -148 6 820 29 28 0 0 chr13 30924277 30924313 -89359999 + AT_rich Low_complexity Low_complexity 1 36 0 6 820 225 0 0 0 chr13 30924452 30924477 -89359835 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 820 313 244 37 0 chr13 30924994 30925076 -89359236 - B1F1 SINE Alu -54 95 11 6 820 237 222 48 0 chr13 30925026 30925089 -89359223 - ID_B1 SINE B4 -81 143 78 6 820 247 215 190 0 chr13 30925094 30925173 -89359139 - L1M5 LINE L1 -468 5656 5563 6 820 195 42 0 0 chr13 30925739 30925763 -89358549 + (T)n Simple_repeat Simple_repeat 1 24 0 6 820 21 0 0 0 chr13 30925809 30925830 -89358482 + AT_rich Low_complexity Low_complexity 1 21 0 6 820 233 118 20 0 chr13 30926497 30926548 -89357764 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 820 250 271 47 39 chr13 30928428 30928555 -89355757 - Charlie7 DNA MER1_type -342 2270 2143 6 820 341 315 46 9 chr13 30929771 30929880 -89354432 - RSINE1 SINE B4 -8 157 45 6 820 2037 301 102 70 chr13 30930593 30932033 -89352279 + Lx9 LINE L1 6091 7467 -6 6 820 668 299 5 19 chr13 30932426 30932631 -89351681 + B4A SINE B4 74 275 -17 6 820 468 0 0 0 chr13 30932928 30932980 -89351332 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 821 453 66 16 0 chr13 30935900 30935961 -89348351 + MERVL-int LTR ERVL 5299 5360 -125 6 821 336 179 46 35 chr13 30935961 30936048 -89348264 + ORR1A3-int LTR MaLR 553 640 -1323 6 821 321 0 0 0 chr13 30936048 30936086 -89348226 + MERVL-int LTR ERVL 5448 5485 0 6 821 3008 11 0 16 chr13 30936086 30936464 -89347848 + MT2_Mm LTR ERVL 1 372 -121 6 821 2908 24 9 0 chr13 30936464 30936797 -89347515 - MERVL-int LTR ERVL -5043 442 107 6 821 552 68 0 0 chr13 30937303 30937376 -89346936 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 6 821 550 252 100 94 chr13 30937630 30937971 -89346341 + L1MC5 LINE L1 7610 7952 -9 6 821 378 0 0 0 chr13 30938332 30938374 -89345938 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 821 405 0 0 0 chr13 30938374 30938419 -89345893 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 821 4436 200 73 36 chr13 30939399 30939645 -89344667 + Lx7 LINE L1 6308 6547 -1149 6 821 201 39 0 0 chr13 30939645 30939671 -89344641 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 6 821 4436 200 73 36 chr13 30939671 30940327 -89343985 + Lx7 LINE L1 6548 7243 -453 6 821 256 294 80 27 chr13 30940725 30940837 -89343475 + MLT1A1 LTR MaLR 131 248 -160 6 821 852 302 48 37 chr13 30943096 30943533 -89340779 + L1M2 LINE L1 4777 5218 -925 6 821 200 35 35 0 chr13 30943566 30943595 -89340717 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 821 434 242 121 20 chr13 30943606 30943804 -89340508 + L1M2 LINE L1 5306 5523 -777 6 821 4672 174 49 109 chr13 30943999 30944309 -89340003 - L1_Mur2 LINE L1 -1002 4875 4620 6 821 1415 75 5 21 chr13 30944309 30944499 -89339813 - B2_Mm1t SINE B2 -5 188 2 6 821 4672 174 49 109 chr13 30944499 30944880 -89339432 - L1_Mur2 LINE L1 -1258 4619 4282 6 821 561 30 0 0 chr13 30944880 30944947 -89339365 + (TC)n Simple_repeat Simple_repeat 1 67 0 6 821 4672 174 49 109 chr13 30944947 30945470 -89338842 - L1_Mur2 LINE L1 -1596 4281 3732 6 821 3186 151 49 20 chr13 30945448 30946057 -89338255 - L1_Mur2 LINE L1 -2639 3241 2615 6 821 638 124 35 9 chr13 30946067 30946181 -89338131 + Lx6 LINE L1 4932 5048 -832 6 821 4418 173 48 26 chr13 30946521 30947762 -89336550 + Lx6 LINE L1 5047 6374 -676 6 821 1778 256 148 18 chr13 30947774 30948343 -89335969 + Lx6 LINE L1 6816 7458 -2 6 821 672 246 102 6 chr13 30950296 30950320 -89333992 - B3 SINE B2 -4 212 182 6 821 342 0 0 0 chr13 30950320 30950358 -89333954 + (TATG)n Simple_repeat Simple_repeat 4 41 0 6 821 672 246 102 6 chr13 30950358 30950509 -89333803 - B3 SINE B2 -35 181 20 6 821 247 271 119 46 chr13 30950642 30950793 -89333519 + L1M5 LINE L1 2940 3101 -3045 6 821 337 200 0 30 chr13 30950894 30950961 -89333351 + ID4 SINE ID 8 72 -11 6 821 497 300 177 28 chr13 30950993 30951247 -89333065 + B4 SINE B4 1 292 0 6 821 5696 138 18 10 chr13 30951335 30952233 -89332079 + Lx4B LINE L1 5998 6902 -156 6 821 3336 210 145 38 chr13 30952348 30953158 -89331154 + RMER1B Other Other 45 948 -118 6 821 189 74 0 0 chr13 30953158 30953185 -89331127 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 6 821 3336 210 145 38 chr13 30953185 30953294 -89331018 + RMER1B Other Other 949 1062 -4 6 821 756 204 91 69 chr13 30954332 30954443 -89329869 + RMER1B Other Other 828 951 -115 6 821 207 69 0 0 chr13 30954443 30954472 -89329840 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 6 821 756 204 91 69 chr13 30954472 30954576 -89329736 + RMER1B Other Other 952 1050 -16 6 821 1849 80 0 16 chr13 30954576 30954819 -89329493 + L1_Mus1 LINE L1 6329 6567 0 6 821 756 204 91 69 chr13 30954819 30954834 -89329478 + RMER1B Other Other 1051 1064 -2 6 821 711 0 0 0 chr13 30956161 30956240 -89328072 + (GGAA)n Simple_repeat Simple_repeat 4 82 0 6 821 1275 62 0 0 chr13 30957851 30957996 -89326316 + B1_Mm SINE Alu 1 145 -2 6 821 189 0 0 0 chr13 30959392 30959413 -89324899 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 821 398 133 24 2 chr13 30959421 30959493 -89324819 + MTD LTR MaLR 30 106 -301 6 821 233 300 0 30 chr13 30960419 30960553 -89323759 + A-rich Low_complexity Low_complexity 5 134 0 6 821 4537 166 58 9 chr13 30960722 30961500 -89322812 + Lx3C LINE L1 6158 6973 -3 6 821 381 298 120 60 chr13 30961542 30961564 -89322748 + B4A SINE B4 1 21 -271 6 821 3693 30 0 0 chr13 30961564 30961960 -89322352 + MTA_Mm LTR MaLR 1 396 0 6 821 381 298 120 60 chr13 30961960 30962187 -89322125 + B4A SINE B4 22 265 -27 6 821 591 102 0 0 chr13 30962210 30962298 -89322014 + (CA)n Simple_repeat Simple_repeat 1 88 0 6 821 21 0 0 0 chr13 30962328 30962349 -89321963 + AT_rich Low_complexity Low_complexity 1 21 0 6 821 29 0 0 0 chr13 30963104 30963133 -89321179 + AT_rich Low_complexity Low_complexity 1 29 0 6 821 786 278 45 83 chr13 30965628 30966059 -89318253 + MTD LTR MaLR 3 405 -14 6 821 2364 164 6 3 chr13 30967806 30968172 -89316140 + ORR1B2 LTR MaLR 1 367 0 6 821 185 196 22 0 chr13 30971756 30971802 -89312510 + (TATATG)n Simple_repeat Simple_repeat 6 52 0 6 821 217 175 31 31 chr13 30971953 30972018 -89312294 + (CTATG)n Simple_repeat Simple_repeat 3 67 0 6 821 1455 97 0 10 chr13 30972658 30972855 -89311457 - B2_Mm2 SINE B2 0 195 1 6 821 502 124 289 0 chr13 30973094 30973191 -89311121 + B1_Mur4 SINE Alu 13 137 -13 6 821 252 0 0 0 chr13 30973192 30973220 -89311092 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 821 237 33 0 0 chr13 30973221 30973251 -89311061 + (CAGG)n Simple_repeat Simple_repeat 4 33 0 6 821 447 259 41 15 chr13 30973424 30973568 -89310744 + L1_Rod LINE L1 4775 4974 -1166 6 821 226 317 58 29 chr13 30973796 30973900 -89310412 - MIRb SINE MIR -70 198 92 6 821 22 70 0 0 chr13 30973975 30974018 -89310294 + AT_rich Low_complexity Low_complexity 1 43 0 6 821 665 200 137 20 chr13 30974438 30974591 -89309721 + ORR1B1 LTR MaLR 41 211 -183 6 821 231 208 0 0 chr13 30974561 30974609 -89309703 + ORR1B1 LTR MaLR 93 140 -189 6 821 2293 131 22 0 chr13 30974609 30974967 -89309345 + Lx5 LINE L1 5617 5982 -1068 6 821 199 284 19 87 chr13 30975543 30975647 -89308665 + MER5B DNA MER1_type 43 139 -39 6 821 4435 104 87 35 chr13 30975790 30976504 -89307808 + RMER17A LTR ERVK 1 751 0 6 821 547 282 56 0 chr13 30976792 30976934 -89307378 - B3A SINE B2 -48 150 1 6 821 243 205 42 71 chr13 30977141 30977309 -89307003 + (CACTG)n Simple_repeat Simple_repeat 5 167 0 6 821 257 246 148 0 chr13 30978317 30978378 -89305934 - ID2 SINE ID -1 82 13 6 821 24 0 0 0 chr13 30979021 30979045 -89305267 + AT_rich Low_complexity Low_complexity 1 24 0 6 821 552 282 77 6 chr13 30979564 30979746 -89304566 + MTE2b LTR MaLR 72 266 -113 6 821 1053 118 192 31 chr13 30980601 30980794 -89303518 + URR1B DNA MER1_type 1 224 -1 6 821 471 226 128 102 chr13 30981258 30981445 -89302867 + B3A SINE B2 2 193 -5 6 821 243 0 0 0 chr13 30982160 30982187 -89302125 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 6 821 1536 187 143 40 chr13 30984271 30984649 -89299663 + MTD LTR MaLR 3 419 0 7 821 341 155 28 0 chr13 30984664 30984735 -89299577 + (CATA)n Simple_repeat Simple_repeat 3 75 0 7 821 279 0 0 0 chr13 30984916 30984947 -89299365 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 821 466 270 10 29 chr13 30988554 30988657 -89295655 + B1F1 SINE Alu 6 106 -11 7 821 249 33 0 0 chr13 30988657 30988687 -89295625 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 821 24 0 0 0 chr13 30988746 30988770 -89295542 + AT_rich Low_complexity Low_complexity 1 24 0 7 821 21 36 0 0 chr13 30989133 30989161 -89295151 + AT_rich Low_complexity Low_complexity 1 28 0 7 821 26 82 0 0 chr13 30989237 30989298 -89295014 + AT_rich Low_complexity Low_complexity 1 61 0 7 821 251 281 49 73 chr13 30990262 30990385 -89293927 + Charlie12 DNA MER1_type 10 129 -2744 7 821 286 238 84 36 chr13 30990409 30990492 -89293820 - RMER30 DNA MER1_type -111 91 5 7 821 802 250 11 16 chr13 30992933 30993116 -89291196 - B3 SINE B2 -4 212 31 7 821 555 136 0 0 chr13 30995475 30995585 -89288727 + (GA)n Simple_repeat Simple_repeat 2 111 0 7 821 1187 51 0 14 chr13 30995837 30995976 -89288336 - B1_Mus1 SINE Alu -11 137 1 7 821 182 217 98 16 chr13 30997430 30997491 -89286821 + L4 LINE RTE 136 201 -1828 7 821 423 274 140 17 chr13 30997675 30997853 -89286459 + L1ME2 LINE L1 5963 6164 0 7 821 24 0 0 0 chr13 30998508 30998532 -89285780 + AT_rich Low_complexity Low_complexity 1 24 0 7 821 22 0 0 0 chr13 30999094 30999116 -89285196 + AT_rich Low_complexity Low_complexity 1 22 0 7 821 276 91 0 0 chr13 31000814 31000858 -89283454 + (CGAA)n Simple_repeat Simple_repeat 2 45 0 1 821 206 375 71 38 chr13 31001149 31001332 -89282980 - L2b LINE L2 -50 3325 3137 2 821 414 0 0 0 chr13 31003626 31003672 -89280640 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 821 420 20 0 0 chr13 31005710 31005759 -89278553 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 821 271 305 86 127 chr13 31006186 31006453 -89277859 + ORR1E LTR MaLR 102 357 -2 5 821 333 290 0 0 chr13 31007785 31007854 -89276458 + ID4_ SINE ID 10 78 -5 6 821 484 217 41 65 chr13 31007855 31007978 -89276334 - B3 SINE B2 0 216 97 7 821 3069 190 94 21 chr13 31007978 31008678 -89275634 + Lx6 LINE L1 6704 7454 -6 8 821 306 0 0 0 chr13 31008842 31008876 -89275436 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 821 381 295 96 51 chr13 31008989 31009364 -89274948 + L1MC5 LINE L1 7379 7770 -191 1 821 2191 272 131 48 chr13 31009485 31011606 -89272706 + Lx8 LINE L1 4308 6726 -747 1 821 1137 336 56 34 chr13 31011627 31012052 -89272260 + Lx8 LINE L1 6781 7224 -249 1 821 1246 254 69 0 chr13 31012052 31012398 -89271914 - ORR1D2 LTR MaLR 0 370 1 1 821 1137 336 56 34 chr13 31012398 31012616 -89271696 + Lx8 LINE L1 7225 7438 -35 1 821 355 291 121 41 chr13 31012647 31012837 -89271475 + L1MD LINE L1 3850 4065 -2081 1 821 1236 163 89 0 chr13 31012837 31013040 -89271272 + URR1B DNA MER1_type 5 225 0 1 821 355 291 121 41 chr13 31013040 31013189 -89271123 + L1MD LINE L1 4066 4216 -1930 1 821 1047 236 49 32 chr13 31013303 31013588 -89270724 + RMER15 LTR ERVL 286 575 0 1 821 1338 282 102 57 chr13 31013588 31014905 -89269407 + L1MA4 LINE L1 4207 5562 -318 1 821 3045 65 2 32 chr13 31014905 31015317 -89268995 - MTB LTR MaLR 0 400 1 1 821 947 297 56 63 chr13 31015317 31015627 -89268685 + L1MA4 LINE L1 5563 5886 -414 1 821 816 186 130 0 chr13 31016126 31016287 -89268025 - URR1B DNA MER1_type -43 182 1 1 821 189 0 0 0 chr13 31016566 31016587 -89267725 + (A)n Simple_repeat Simple_repeat 1 21 0 1 821 730 206 22 0 chr13 31016694 31016830 -89267482 + RSINE1 SINE B4 3 141 -24 2 821 267 31 0 0 chr13 31016831 31016863 -89267449 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 821 279 0 0 0 chr13 31016876 31016907 -89267405 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 821 28 61 0 0 chr13 31016965 31017014 -89267298 + AT_rich Low_complexity Low_complexity 1 49 0 2 821 211 125 75 0 chr13 31018204 31018244 -89266068 + (ATGTG)n Simple_repeat Simple_repeat 3 45 0 2 821 21 0 0 0 chr13 31019353 31019374 -89264938 + AT_rich Low_complexity Low_complexity 1 21 0 2 821 1726 163 107 22 chr13 31020601 31020964 -89263348 - ORR1B1 LTR MaLR 0 394 1 2 821 231 405 64 29 chr13 31021847 31022020 -89262292 + MLT1L LTR MaLR 231 409 -201 2 821 231 347 20 10 chr13 31022060 31022159 -89262153 + MLT1L LTR MaLR 505 604 -6 2 821 21 0 0 0 chr13 31022721 31022742 -89261570 + AT_rich Low_complexity Low_complexity 1 21 0 2 821 31 44 0 0 chr13 31024209 31024254 -89260058 + AT_rich Low_complexity Low_complexity 1 45 0 2 821 1220 198 79 95 chr13 31024260 31024640 -89259672 + MTE2a LTR MaLR 1 374 -5 3 821 1462 198 170 35 chr13 31025094 31025234 -89259078 + MTC LTR MaLR 1 181 -240 3 821 3207 150 34 7 chr13 31025234 31025791 -89258521 + RMER15 LTR ERVL 4 575 0 3 821 1462 198 170 35 chr13 31025791 31026021 -89258291 + MTC LTR MaLR 182 421 0 3 821 194 232 34 51 chr13 31026134 31026193 -89258119 - L3 LINE CR1 -3635 854 797 3 821 27 0 0 0 chr13 31026664 31026691 -89257621 + AT_rich Low_complexity Low_complexity 1 27 0 3 821 22 56 0 0 chr13 31027227 31027263 -89257049 + AT_rich Low_complexity Low_complexity 1 36 0 3 821 600 137 0 0 chr13 31028873 31028975 -89255337 + (TA)n Simple_repeat Simple_repeat 2 103 0 3 821 517 203 49 42 chr13 31031063 31031207 -89253105 - B1_Mur1 SINE Alu -2 147 3 3 821 623 289 13 0 chr13 31031605 31031764 -89252548 + ID_B1 SINE B4 2 162 -62 3 821 787 217 128 0 chr13 31033459 31033694 -89250618 + RCHARR1 DNA MER1_type 642 906 -68 3 821 580 261 43 16 chr13 31033828 31034015 -89250297 + B3A SINE B2 2 193 -5 4 821 764 258 28 19 chr13 31034096 31034309 -89250003 + ID_B1 SINE B4 4 218 -6 4 821 447 306 167 21 chr13 31034357 31034884 -89249428 + L1M5 LINE L1 4431 5034 -1112 4 821 306 0 0 0 chr13 31035047 31035081 -89249231 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 821 488 242 61 0 chr13 31035201 31035300 -89249012 + PB1D10 SINE Alu 5 109 -8 4 821 209 230 26 26 chr13 31035321 31035397 -89248915 + (TA)n Simple_repeat Simple_repeat 1 76 0 4 821 255 152 0 0 chr13 31035989 31036035 -89248277 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 821 881 254 102 55 chr13 31037407 31037661 -89246651 + B4 SINE B4 26 291 -1 4 821 1106 268 45 17 chr13 31037756 31038045 -89246267 + ORR1D2 LTR MaLR 61 357 -13 4 821 360 274 79 36 chr13 31040514 31040654 -89243658 + B1F SINE Alu 3 148 -1 4 821 996 56 27 34 chr13 31041055 31041202 -89243110 - B1_Mus1 SINE Alu -1 147 2 5 821 1009 227 103 93 chr13 31041279 31041600 -89242712 - ORR1D1 LTR MaLR -50 324 1 5 821 236 290 30 70 chr13 31041960 31042060 -89242252 + MLT1A1 LTR MaLR 1 96 -312 5 821 373 283 16 75 chr13 31042257 31042523 -89241789 + (GGATG)n Simple_repeat Simple_repeat 1 250 0 5 821 986 224 60 19 chr13 31042816 31043085 -89241227 - Charlie1 DNA MER1_type -1746 1035 756 5 821 1680 211 86 39 chr13 31043097 31043762 -89240550 + BGLII_B LTR ERVK 1 536 -25 5 821 368 227 77 0 chr13 31043969 31044062 -89240250 - PB1D10 SINE Alu -7 113 12 5 821 308 231 126 91 chr13 31044227 31044370 -89239942 - L1MCa LINE L1 -4733 1775 1628 5 821 1010 153 288 37 chr13 31044644 31044943 -89239369 + ORR1D1 LTR MaLR 1 374 0 5 821 454 273 216 7 chr13 31045511 31045946 -89238366 - L1MCa LINE L1 -5138 1370 845 5 821 1137 217 57 133 chr13 31046476 31046881 -89237431 + ORR1D1 LTR MaLR 1 374 0 5 821 241 270 43 43 chr13 31046953 31047046 -89237266 + B4A SINE B4 200 292 0 6 821 441 235 0 0 chr13 31047385 31047466 -89236846 + ID4 SINE ID 2 82 -1 6 821 267 31 0 0 chr13 31047495 31047527 -89236785 + (T)n Simple_repeat Simple_repeat 1 32 0 6 821 260 264 27 27 chr13 31047897 31047971 -89236341 - MER20 DNA MER1_type -52 167 94 6 821 621 270 41 30 chr13 31047995 31048201 -89236111 + MTE2a LTR MaLR 176 403 -16 6 821 190 286 105 23 chr13 31048321 31048407 -89235905 + L2 LINE L2 213 305 -3114 6 821 706 264 179 57 chr13 31050125 31050600 -89233712 + RMER5 LTR ERV1 2 534 0 6 821 271 278 201 25 chr13 31050773 31050972 -89233340 + MER74A LTR ERVL 317 550 -8 6 821 21 82 0 0 chr13 31051302 31051351 -89232961 + AT_rich Low_complexity Low_complexity 1 49 0 6 821 230 327 111 72 chr13 31051514 31051695 -89232617 + RMER5 LTR ERV1 16 203 -331 6 821 1266 101 0 0 chr13 31052013 31052192 -89232120 + RLTR21 LTR ERVK 230 408 -1164 7 821 475 256 143 57 chr13 31052217 31052461 -89231851 + RMER5 LTR ERV1 262 526 -8 6 821 237 132 0 0 chr13 31053724 31053762 -89230550 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 821 1797 134 86 127 chr13 31053841 31054235 -89230077 + ORR1C1 LTR MaLR 1 378 0 7 821 544 252 37 37 chr13 31055204 31055340 -89228972 - RSINE1 SINE B4 -28 137 2 7 821 243 0 0 0 chr13 31055367 31055394 -89228918 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 821 180 0 0 0 chr13 31055394 31055413 -89228899 + (GA)n Simple_repeat Simple_repeat 1 20 0 7 821 415 241 41 74 chr13 31055438 31055559 -89228753 - RSINE1 SINE B4 -41 124 8 7 821 411 210 13 110 chr13 31055919 31056074 -89228238 + B1F SINE Alu 10 149 0 7 821 383 268 0 0 chr13 31056857 31056954 -89227358 + RSINE1 SINE B4 2 98 -67 7 821 309 305 0 31 chr13 31057164 31057262 -89227050 + RSINE1 SINE B4 71 165 0 7 821 219 250 0 0 chr13 31057262 31057330 -89226982 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 7 821 342 223 270 43 chr13 31059220 31059450 -89224862 - B4A SINE B4 -10 282 1 8 821 198 0 0 0 chr13 31059655 31059677 -89224635 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 8 821 275 0 0 28 chr13 31061746 31061782 -89222530 + (GAAAA)n Simple_repeat Simple_repeat 3 37 0 8 821 186 133 0 0 chr13 31061801 31061831 -89222481 + (GGGA)n Simple_repeat Simple_repeat 4 33 0 8 821 375 220 24 37 chr13 31062566 31062702 -89221610 - PB1D10 SINE Alu -1 148 8 8 821 232 299 0 58 chr13 31062621 31062724 -89221588 - ID_B1 SINE B4 -55 169 73 8 821 185 350 0 0 chr13 31062736 31062796 -89221516 - MIRc SINE MIR -128 140 81 8 821 277 222 32 0 chr13 31063280 31063343 -89220969 + PB1 SINE Alu 28 92 -35 8 821 1637 36 0 5 chr13 31063344 31063537 -89220775 + B2_Mm1t SINE B2 2 193 0 8 821 588 314 98 44 chr13 31063726 31064043 -89220269 + RCHARR1 DNA MER1_type 2 335 -639 8 102 602 286 159 40 chr13 31064043 31064364 -89219948 + ORR1E LTR MaLR 1 359 0 9 822 557 221 7 0 chr13 31064367 31064512 -89219800 + (TA)n Simple_repeat Simple_repeat 1 146 0 9 822 1833 256 61 5 chr13 31064519 31065123 -89219189 + RCHARR1 DNA MER1_type 335 972 -2 8 822 402 326 29 6 chr13 31066090 31066263 -89218049 + GA-rich Low_complexity Low_complexity 2 178 0 9 822 1081 157 35 0 chr13 31066711 31066908 -89217404 - URR1B DNA MER1_type -8 217 14 9 822 26 0 0 0 chr13 31067295 31067321 -89216991 + AT_rich Low_complexity Low_complexity 1 26 0 9 822 350 201 91 33 chr13 31068976 31069075 -89215237 - PB1D10 SINE Alu -4 123 8 9 822 189 74 0 0 chr13 31069115 31069142 -89215170 + (TCTG)n Simple_repeat Simple_repeat 1 27 0 9 822 619 150 0 43 chr13 31069144 31069332 -89214980 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 822 23 33 0 0 chr13 31070640 31070670 -89213642 + AT_rich Low_complexity Low_complexity 1 30 0 9 822 21 36 0 0 chr13 31071758 31071786 -89212526 + AT_rich Low_complexity Low_complexity 1 28 0 9 822 243 0 0 0 chr13 31071900 31071927 -89212385 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 822 711 154 15 0 chr13 31071930 31072060 -89212252 - B1_Mur4 SINE Alu -13 137 6 1 822 277 304 12 108 chr13 31072060 31072086 -89212226 - B4A SINE B4 -75 214 73 1 822 200 34 0 33 chr13 31072230 31072260 -89212052 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 1 822 471 275 27 61 chr13 31072973 31073120 -89211192 + B1F SINE Alu 7 148 -1 1 822 227 255 0 19 chr13 31074016 31074068 -89210244 + GA-rich Low_complexity Low_complexity 6 56 0 1 822 410 149 11 0 chr13 31074228 31074315 -89209997 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 822 245 346 8 8 chr13 31074342 31074470 -89209842 + (CATA)n Simple_repeat Simple_repeat 4 131 0 1 822 24 53 0 0 chr13 31075755 31075793 -89208519 + AT_rich Low_complexity Low_complexity 1 38 0 1 822 21 57 0 0 chr13 31075840 31075875 -89208437 + AT_rich Low_complexity Low_complexity 1 35 0 1 822 351 0 0 0 chr13 31079403 31079442 -89204870 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 822 267 269 55 46 chr13 31079480 31079589 -89204723 - MIR3 SINE MIR -18 190 81 1 822 286 290 14 0 chr13 31080073 31080142 -89204170 - ID4_ SINE ID -2 81 12 1 822 289 257 14 14 chr13 31080486 31080557 -89203755 + BC1_Mm scRNA scRNA 4 74 -78 1 822 21 0 0 0 chr13 31081009 31081030 -89203282 + AT_rich Low_complexity Low_complexity 1 21 0 1 822 386 342 9 0 chr13 31085450 31085561 -89198751 + PB1 SINE Alu 13 124 -3 1 822 223 210 48 16 chr13 31085562 31085625 -89198687 + GA-rich Low_complexity Low_complexity 4 68 0 1 822 250 305 54 96 chr13 31085709 31085876 -89198436 - ID_B1 SINE B4 -63 161 2 1 822 461 300 80 0 chr13 31086850 31087000 -89197312 - Tigger7 DNA MER2_type -1 2490 2329 1 822 544 248 13 51 chr13 31087007 31087164 -89197148 - Tigger7 DNA MER2_type -2026 465 315 1 822 247 211 0 0 chr13 31087217 31087269 -89197043 - B1F SINE Alu -19 130 79 1 822 407 316 82 62 chr13 31087881 31088222 -89196090 - ORR1E LTR MaLR -6 353 6 1 822 198 0 0 0 chr13 31089744 31089766 -89194546 + (T)n Simple_repeat Simple_repeat 1 22 0 1 822 966 167 0 0 chr13 31090318 31090498 -89193814 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 822 417 214 0 0 chr13 31090510 31090608 -89193704 + (TATATG)n Simple_repeat Simple_repeat 1 98 0 1 822 253 257 12 98 chr13 31090608 31090690 -89193622 - RSINE1 SINE B4 0 165 91 1 822 294 303 63 18 chr13 31090713 31090824 -89193488 - B4A SINE B4 -174 118 3 1 822 540 288 62 50 chr13 31091843 31092004 -89192308 + RSINE1 SINE B4 3 165 0 1 822 221 300 0 0 chr13 31092178 31092248 -89192064 + GA-rich Low_complexity Low_complexity 1 70 0 1 822 4280 55 5 1 chr13 31092343 31092996 -89191316 - L1_Mus1 LINE L1 -579 5988 5334 1 822 4673 69 0 0 chr13 31092996 31093575 -89190737 + L1_Mus1 LINE L1 5988 6566 -1 1 822 353 243 0 9 chr13 31093651 31093759 -89190553 + (TA)n Simple_repeat Simple_repeat 2 108 0 1 822 189 0 0 0 chr13 31093763 31093784 -89190528 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 822 653 298 49 49 chr13 31093822 31094229 -89190083 - L1MA5 LINE L1 -267 6033 5602 1 822 519 125 19 9 chr13 31095715 31095820 -89188492 + (TGG)n Simple_repeat Simple_repeat 3 108 0 1 822 893 262 86 30 chr13 31096921 31097294 -89187018 - MTD LTR MaLR -8 411 18 1 822 1203 276 111 4 chr13 31097584 31098060 -89186252 - L1MA6 LINE L1 -6 6294 5768 1 822 387 235 29 125 chr13 31098081 31098114 -89186198 - B3A SINE B2 0 198 174 1 822 231 36 0 0 chr13 31098114 31098142 -89186170 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 822 387 235 29 125 chr13 31098142 31098244 -89186068 - B3A SINE B2 -25 173 76 1 822 237 98 0 0 chr13 31098247 31098288 -89186024 + (C)n Simple_repeat Simple_repeat 1 41 0 1 822 228 86 0 0 chr13 31098367 31098402 -89185910 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 1 822 913 72 137 0 chr13 31098402 31098541 -89185771 - B2_Mm2 SINE B2 -36 159 2 1 822 297 0 0 0 chr13 31098758 31098791 -89185521 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 822 207 69 0 0 chr13 31098913 31098942 -89185370 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1 822 412 108 0 15 chr13 31098944 31099010 -89185302 - B2_Mm2 SINE B2 -34 161 97 1 822 306 0 0 0 chr13 31099375 31099409 -89184903 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 822 433 174 86 9 chr13 31099412 31099528 -89184784 + Lx9 LINE L1 7511 7635 -9 1 822 879 102 0 0 chr13 31100281 31100409 -89183903 + (TCTA)n Simple_repeat Simple_repeat 1 128 0 1 822 566 153 252 0 chr13 31100410 31100521 -89183791 - B1_Mus1 SINE Alu -6 142 4 1 822 346 250 13 0 chr13 31100522 31100598 -89183714 - PB1D10 SINE Alu -16 101 25 1 822 1509 208 35 13 chr13 31100695 31101011 -89183301 - MTC LTR MaLR 0 421 99 1 822 213 65 0 0 chr13 31101376 31101407 -89182905 + (T)n Simple_repeat Simple_repeat 1 31 0 1 822 31747 6 1 1 chr13 31101418 31105656 -89178656 - L1Md_A LINE L1 0 6582 2346 1 822 754 133 0 16 chr13 31105943 31106065 -89178247 - MTC LTR MaLR -301 120 1 1 822 337 235 103 23 chr13 31106082 31106169 -89178143 - RSINE1 SINE B4 -29 136 43 1 822 1756 157 15 23 chr13 31106722 31107088 -89177224 - RLTR20B1 LTR ERVK 0 534 175 1 822 2225 150 50 48 chr13 31107299 31107719 -89176593 - MTC LTR MaLR 0 421 1 1 822 254 350 7 21 chr13 31107825 31107968 -89176344 - L1ME3B LINE L1 -36 6204 6064 1 822 230 295 0 0 chr13 31108707 31108768 -89175544 + PB1 SINE Alu 29 89 -38 1 822 252 0 0 0 chr13 31108768 31108796 -89175516 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 822 213 39 0 0 chr13 31108796 31108821 -89175491 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 822 426 53 0 0 chr13 31109348 31109405 -89174907 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 822 722 279 107 16 chr13 31109405 31109649 -89174663 - B4 SINE B4 -23 269 4 1 822 235 272 56 49 chr13 31109813 31109956 -89174356 - L1M5 LINE L1 -786 5360 5217 1 822 425 243 0 174 chr13 31109997 31110181 -89174131 + RSINE1 SINE B4 14 165 0 1 822 471 260 0 0 chr13 31110224 31110401 -89173911 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 822 270 316 84 61 chr13 31110455 31110799 -89173513 - L1M5 LINE L1 -1165 4981 4630 1 822 4760 60 22 67 chr13 31111095 31111772 -89172540 - L1_Mus2 LINE L1 0 6566 5920 1 822 261 0 0 0 chr13 31111933 31111962 -89172350 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 822 288 278 68 14 chr13 31112110 31112183 -89172129 - Charlie12 DNA MER1_type -2796 77 1 1 822 207 255 20 0 chr13 31112234 31112285 -89172027 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 822 325 229 12 0 chr13 31112286 31112369 -89171943 - Tigger7 DNA MER2_type -100 2391 2308 1 822 1166 116 0 6 chr13 31112373 31112546 -89171766 + B2_Mm2 SINE B2 1 172 -23 1 822 1094 298 47 47 chr13 31112572 31112931 -89171381 - Tigger7 DNA MER2_type -2132 359 1 1 822 211 324 99 0 chr13 31115657 31115728 -89168584 + ID4 SINE ID 2 79 -4 1 822 340 293 41 72 chr13 31115941 31116136 -89168176 + ORR1E LTR MaLR 2 190 -169 1 822 283 279 41 0 chr13 31116274 31116446 -89167866 + (TA)n Simple_repeat Simple_repeat 1 179 0 1 822 356 264 42 0 chr13 31116479 31116646 -89167666 + (TA)n Simple_repeat Simple_repeat 2 175 0 1 822 222 329 36 0 chr13 31116580 31116747 -89167565 + (TATATG)n Simple_repeat Simple_repeat 2 174 0 1 822 302 260 40 23 chr13 31116701 31116878 -89167434 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 822 362 201 81 58 chr13 31117092 31117266 -89167046 + L1MA7 LINE L1 5990 6167 -124 1 822 340 207 128 8 chr13 31117330 31117447 -89166865 + L1MA7 LINE L1 6155 6285 -6 1 822 181 230 297 0 chr13 31117839 31117913 -89166399 - MER5B DNA MER1_type -73 105 10 1 822 889 294 104 20 chr13 31118584 31119212 -89165100 - Lx9 LINE L1 -1729 5915 5260 1 822 971 232 132 20 chr13 31119239 31119542 -89164770 + MTD LTR MaLR 83 419 0 1 822 859 291 48 21 chr13 31119633 31120012 -89164300 - L1_Mur3 LINE L1 -819 5061 4673 1 822 278 259 37 0 chr13 31120031 31120112 -89164200 - L1_Rod LINE L1 -441 5406 5323 1 822 509 123 17 2 chr13 31120159 31120251 -89164061 - B2_Mm2 SINE B2 -104 94 1 1 822 718 100 50 0 chr13 31120340 31120460 -89163852 - URR1B DNA MER1_type -14 211 86 1 822 342 256 67 44 chr13 31120460 31120475 -89163837 + CYRA11_Mm Unknown Y-chromosome 185 322 -295 1 822 596 298 44 34 chr13 31120516 31120811 -89163501 - L1_Rod LINE L1 -651 5196 4899 1 822 1683 175 16 10 chr13 31120836 31121142 -89163170 + RLTR10E LTR ERVK 1 308 -3 1 822 254 282 104 14 chr13 31121215 31121359 -89162953 - Lx9 LINE L1 -1297 4846 4690 1 822 635 122 19 0 chr13 31121362 31121469 -89162843 + (TCCC)n Simple_repeat Simple_repeat 4 112 0 1 822 664 284 18 18 chr13 31121507 31121837 -89162475 - Lx9 LINE L1 -1453 4687 4358 1 822 435 254 66 0 chr13 31122277 31122399 -89161913 - L1_Mur3 LINE L1 -1536 4344 4215 1 822 689 264 26 37 chr13 31122411 31122600 -89161712 - B3A SINE B2 -6 192 6 1 822 516 246 28 28 chr13 31122753 31122966 -89161346 + Lx9 LINE L1 5761 5973 -1671 1 822 1279 318 58 7 chr13 31123150 31123612 -89160700 + Lx9 LINE L1 6372 6857 -787 1 822 574 291 36 42 chr13 31123599 31123858 -89160454 - Lx9 LINE L1 -3296 2847 2594 1 822 264 30 0 0 chr13 31123858 31123891 -89160421 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1 822 574 291 36 42 chr13 31123891 31123968 -89160344 - Lx9 LINE L1 -3550 2593 2513 1 822 1066 103 0 0 chr13 31124172 31124318 -89159994 + B1_Mus1 SINE Alu 3 148 0 1 822 725 62 0 0 chr13 31124519 31124616 -89159696 - B1_Mus2 SINE Alu 0 147 51 1 822 247 182 56 144 chr13 31124562 31124652 -89159660 - RLTR25B LTR ERVK -519 509 428 1 822 262 267 61 12 chr13 31125750 31125913 -89158399 + (TCTA)n Simple_repeat Simple_repeat 3 173 0 1 822 1547 160 81 84 chr13 31126003 31126350 -89157962 - ORR1B1 LTR MaLR -8 386 41 1 822 185 180 20 0 chr13 31126536 31126586 -89157726 + (TCTA)n Simple_repeat Simple_repeat 2 52 0 1 822 2128 149 119 3 chr13 31127475 31127852 -89156460 + MTC LTR MaLR 1 421 0 1 822 203 229 36 0 chr13 31128827 31128910 -89155402 + (TA)n Simple_repeat Simple_repeat 1 86 0 1 822 27 0 0 0 chr13 31128926 31128953 -89155359 + AT_rich Low_complexity Low_complexity 1 27 0 1 822 8140 281 75 31 chr13 31129002 31131896 -89152416 - MERVL_2A-int LTR ERVL -828 4933 1912 1 822 3049 29 0 0 chr13 31131950 31132296 -89152016 + ORR1A0 LTR MaLR 1 346 0 1 822 677 212 102 0 chr13 31132594 31132731 -89151581 + B3A SINE B2 1 151 -47 2 822 835 332 69 48 chr13 31132935 31133413 -89150899 + MLT1D LTR MaLR 18 505 0 2 822 231 111 241 0 chr13 31133682 31133736 -89150576 + ID4 SINE ID 15 81 -2 2 822 247 278 97 0 chr13 31134465 31134537 -89149775 + ID4_ SINE ID 2 80 -3 2 822 660 373 83 33 chr13 31134539 31135021 -89149291 + MLT1D-int LTR MaLR 548 1053 -318 2 822 28 61 0 0 chr13 31136872 31136921 -89147391 + AT_rich Low_complexity Low_complexity 1 49 0 2 822 234 0 0 0 chr13 31137419 31137445 -89146867 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 2 822 527 225 54 0 chr13 31137456 31137567 -89146745 - ID_B1 SINE B4 -13 211 95 2 822 576 154 0 0 chr13 31138007 31138130 -89146182 + T-rich Low_complexity Low_complexity 2 124 0 2 822 510 262 162 42 chr13 31138377 31138660 -89145652 + MLT1C LTR MaLR 75 391 -76 2 822 777 304 11 23 chr13 31139022 31139285 -89145027 - MER121 Unknown Unknown -89 323 64 2 822 23 0 0 0 chr13 31139315 31139338 -89144974 + AT_rich Low_complexity Low_complexity 1 23 0 2 822 207 0 0 0 chr13 31139435 31139458 -89144854 + (TC)n Simple_repeat Simple_repeat 2 24 0 2 822 535 347 70 28 chr13 31140078 31140434 -89143878 + MLT2B4 LTR ERVL 4 374 -182 2 822 225 333 60 17 chr13 31140555 31140671 -89143641 - LTR16E1 LTR ERVL -7 531 411 2 822 351 0 0 0 chr13 31143093 31143132 -89141180 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 822 296 216 0 10 chr13 31143648 31143751 -89140561 + (TTAGGG)n Simple_repeat Simple_repeat 3 104 0 2 822 2563 232 52 43 chr13 31143858 31144684 -89139628 - RMER1C Other Other -1 1341 36 2 822 291 85 0 0 chr13 31144931 31144978 -89139334 + (CCAA)n Simple_repeat Simple_repeat 2 48 0 2 822 512 328 97 41 chr13 31145131 31145542 -89138770 - Tigger11a DNA MER2_type -59 676 243 2 822 385 274 24 12 chr13 31145562 31145647 -89138665 - B3 SINE B2 -129 87 2 2 822 461 262 0 10 chr13 31145862 31145966 -89138346 - PB1D10 SINE Alu -1 116 14 2 822 1158 145 91 14 chr13 31146066 31146276 -89138036 - URR1A DNA MER1_type 0 226 1 2 822 280 260 151 19 chr13 31146628 31146734 -89137578 + Tigger5 DNA MER2_type 43 162 -2244 2 822 252 288 38 0 chr13 31146908 31146988 -89137324 + ID2 SINE ID 1 83 0 2 822 252 167 0 0 chr13 31147182 31147230 -89137082 + T-rich Low_complexity Low_complexity 1 48 0 2 822 227 360 59 10 chr13 31149055 31149156 -89135156 + MER5B DNA MER1_type 57 162 -16 2 822 473 281 81 29 chr13 31149186 31149358 -89134954 + MER5A DNA MER1_type 7 187 -2 2 822 349 283 2 44 chr13 31149568 31149688 -89134624 - PB1D7 SINE Alu 0 120 5 2 822 186 43 0 0 chr13 31149730 31149753 -89134559 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 822 834 64 0 0 chr13 31149763 31149872 -89134440 + (TCTA)n Simple_repeat Simple_repeat 3 111 0 2 822 358 271 41 25 chr13 31150028 31150149 -89134163 - MLT1A1 LTR MaLR -12 396 274 2 822 894 116 0 0 chr13 31150160 31150298 -89134014 + (TG)n Simple_repeat Simple_repeat 2 139 0 2 822 243 284 71 135 chr13 31150427 31150553 -89133759 - MLT1A1 LTR MaLR -286 122 5 2 822 508 235 34 53 chr13 31150977 31151100 -89133212 + PB1D10 SINE Alu 1 115 -2 2 822 246 193 69 46 chr13 31151142 31151229 -89133083 + L1M4 LINE L1 5313 5401 -745 2 822 327 247 111 0 chr13 31151256 31151347 -89132965 + PB1 SINE Alu 23 125 -2 2 822 231 284 81 66 chr13 31151300 31151353 -89132959 - ORR1D-int LTR MaLR -52 1318 1264 2 822 270 224 90 0 chr13 31151353 31151420 -89132892 + ID4 SINE ID 2 74 -9 2 822 256 274 0 0 chr13 31151422 31151473 -89132839 + ID_B1 SINE B4 166 216 -8 2 822 231 284 81 66 chr13 31151473 31151502 -89132810 - ORR1D-int LTR MaLR -107 1261 1181 2 822 408 71 0 0 chr13 31151621 31151677 -89132635 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 822 466 240 43 42 chr13 31152183 31152401 -89131911 + L1M4 LINE L1 5474 5689 -2096 2 822 438 258 11 0 chr13 31152405 31152494 -89131818 + RSINE1 SINE B4 4 93 -72 2 822 198 342 83 6 chr13 31153716 31153872 -89130440 + L2 LINE L2 1963 2130 -1289 2 822 1222 286 57 15 chr13 31153933 31154334 -89129978 - RMER5 LTR ERV1 -4 530 113 2 822 1661 165 84 28 chr13 31154643 31154971 -89129341 - ORR1C1 LTR MaLR -2 376 27 2 822 405 54 0 0 chr13 31154971 31155027 -89129285 + (TTTA)n Simple_repeat Simple_repeat 4 59 0 2 822 706 177 259 0 chr13 31155027 31155185 -89129127 - B3 SINE B2 -16 200 2 2 822 1661 165 84 28 chr13 31155185 31155210 -89129102 - ORR1C1 LTR MaLR -352 26 3 2 822 558 317 35 0 chr13 31155212 31155354 -89128958 - B3A SINE B2 -30 168 22 2 822 63 62 0 0 chr13 31155558 31155670 -89128642 + AT_rich Low_complexity Low_complexity 1 112 0 2 822 710 215 175 0 chr13 31155820 31155997 -89128315 - B3 SINE B2 -6 210 3 2 822 3683 282 30 14 chr13 31156066 31157121 -89127191 - Lx8 LINE L1 -164 7309 6238 2 822 1679 167 88 10 chr13 31157199 31157507 -89126805 + RMER19B LTR ERVK 1 332 -570 2 822 1995 162 118 5 chr13 31157513 31157885 -89126427 + RMER19B LTR ERVK 482 895 -7 2 822 261 0 0 0 chr13 31157889 31157918 -89126394 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 822 332 262 36 19 chr13 31158087 31158320 -89125992 - Lx8 LINE L1 -1620 6024 5789 2 822 276 350 45 68 chr13 31158607 31158655 -89125657 - B3A SINE B2 -68 130 2 2 822 330 301 12 12 chr13 31158655 31158739 -89125573 - B4 SINE B4 -207 85 2 2 822 556 245 45 77 chr13 31158869 31159090 -89125222 - RMER15 LTR ERVL -13 562 349 2 822 213 65 0 0 chr13 31159122 31159153 -89125159 + (CAA)n Simple_repeat Simple_repeat 2 32 0 2 822 24 32 0 0 chr13 31159949 31159980 -89124332 + AT_rich Low_complexity Low_complexity 1 31 0 2 822 476 133 0 12 chr13 31160845 31160929 -89123383 + (TCC)n Simple_repeat Simple_repeat 3 85 0 2 822 226 202 17 226 chr13 31161850 31161965 -89122347 + MER21B LTR ERV1 647 737 -126 2 822 646 244 73 60 chr13 31162259 31162477 -89121835 - ID_B1 SINE B4 0 224 4 2 822 497 240 110 16 chr13 31162887 31163014 -89121298 - B1F2 SINE Alu -6 143 5 2 822 540 124 0 0 chr13 31163223 31163312 -89121000 + RMER1A Other Other 931 1019 -11 2 822 252 330 38 57 chr13 31163433 31163464 -89120848 + ID_B1 SINE B4 67 98 -126 2 822 1576 185 40 43 chr13 31163464 31163837 -89120475 - ORR1D1 LTR MaLR -2 372 1 2 822 252 330 38 57 chr13 31163837 31163911 -89120401 + ID_B1 SINE B4 99 170 -54 2 822 298 307 22 33 chr13 31163839 31163930 -89120382 + PB1D10 SINE Alu 19 108 -9 2 822 191 162 50 0 chr13 31163952 31164032 -89120280 + A-rich Low_complexity Low_complexity 2 85 0 2 822 2467 68 3 0 chr13 31164353 31164676 -89119636 - L1Md_T LINE L1 0 6582 6259 2 822 460 285 114 12 chr13 31164927 31165094 -89119218 - MER2 DNA MER2_type -160 185 2 2 822 289 250 22 22 chr13 31166520 31166610 -89117702 + CT-rich Low_complexity Low_complexity 2 91 0 2 822 443 175 33 0 chr13 31166971 31167091 -89117221 + (TA)n Simple_repeat Simple_repeat 2 125 0 2 822 262 114 0 22 chr13 31167978 31168023 -89116289 - U5 snRNA snRNA -72 44 1 2 822 204 67 0 0 chr13 31169620 31169650 -89114662 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 2 822 22 0 0 0 chr13 31169773 31169795 -89114517 + GC_rich Low_complexity Low_complexity 1 22 0 2 822 188 32 0 88 chr13 31171090 31171124 -89113188 + (GGGTG)n Simple_repeat Simple_repeat 3 33 0 2 822 231 61 0 0 chr13 31171226 31171259 -89113053 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 822 345 24 0 0 chr13 31171261 31171303 -89113009 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 822 387 0 0 0 chr13 31171303 31171345 -89112967 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 822 435 19 0 0 chr13 31171543 31171595 -89112717 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 822 232 247 39 64 chr13 31172525 31172603 -89111709 - ID4 SINE ID -5 78 3 2 822 206 103 0 49 chr13 31172623 31172664 -89111648 + G-rich Low_complexity Low_complexity 1 39 0 2 822 344 256 106 76 chr13 31174733 31174970 -89109342 + L1MB8 LINE L1 5892 6135 -43 2 822 22 0 0 0 chr13 31175523 31175545 -89108767 + AT_rich Low_complexity Low_complexity 1 22 0 2 822 1230 259 107 34 chr13 31176581 31176624 -89107688 - Lx8 LINE L1 -2 7471 7425 2 822 360 0 0 0 chr13 31176624 31176664 -89107648 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 822 1230 259 107 34 chr13 31176664 31177095 -89107217 - Lx8 LINE L1 -49 7424 6963 2 822 261 0 0 0 chr13 31177103 31177132 -89107180 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 822 639 204 0 18 chr13 31177135 31177362 -89106950 + GA-rich Low_complexity Low_complexity 1 222 0 2 822 1893 281 101 3 chr13 31177366 31177542 -89106770 - Lx8 LINE L1 -530 6943 6758 2 822 225 0 0 0 chr13 31177542 31177567 -89106745 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 822 1893 281 101 3 chr13 31177567 31178062 -89106250 - Lx8 LINE L1 -716 6757 6207 2 822 1087 211 14 5 chr13 31178305 31178519 -89105793 - B3 SINE B2 0 216 1 2 822 681 284 93 48 chr13 31178639 31178799 -89105513 - Lx8 LINE L1 -1541 6103 5931 2 822 3149 45 37 0 chr13 31178799 31179181 -89105131 - MTA_Mm LTR MaLR 0 396 1 2 822 8759 32 27 2 chr13 31179181 31180252 -89104060 - MTA_Mm-int LTR MaLR 0 1098 1 2 822 1124 275 47 45 chr13 31180252 31180811 -89103501 - Lx8 LINE L1 -1714 5930 5336 2 822 2328 199 5 12 chr13 31180855 31181268 -89103044 + MTC LTR MaLR 12 421 0 2 822 3037 176 110 13 chr13 31181267 31181967 -89102345 + MTC-int LTR MaLR 2 884 -374 2 822 2025 313 65 12 chr13 31181970 31182745 -89101567 - Lx8 LINE L1 -75 7398 6583 2 822 1580 299 87 25 chr13 31182756 31182820 -89101492 - Lx8 LINE L1 -1013 6460 6399 2 822 947 238 14 5 chr13 31182820 31183031 -89101281 - B3 SINE B2 -3 213 1 2 822 1861 274 70 14 chr13 31183031 31183909 -89100403 - Lx8 LINE L1 -1075 6398 5453 2 822 248 0 31 0 chr13 31183909 31183941 -89100371 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 2 822 1861 243 50 2 chr13 31183941 31184064 -89100248 - Lx8 LINE L1 -428 5452 5321 2 822 1092 210 122 6 chr13 31184068 31184413 -89099899 - Lx8 LINE L1 -1544 4336 3952 2 822 303 292 20 30 chr13 31184420 31184519 -89099793 + MTD LTR MaLR 6 103 -316 2 822 547 332 39 43 chr13 31184508 31184691 -89099621 + MT2A LTR ERVL 141 314 -219 2 822 504 0 0 0 chr13 31184691 31184747 -89099565 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 822 547 282 129 67 chr13 31184747 31184931 -89099381 + MT2A LTR ERVL 315 601 0 2 822 1286 232 29 8 chr13 31184934 31185312 -89099000 - Lx8 LINE L1 -1947 3933 3548 2 822 6447 81 18 10 chr13 31185315 31186698 -89097614 + L1VL2 LINE L1 536 1930 -1685 2 822 591 288 72 46 chr13 31186735 31187379 -89096933 - L1_Rod LINE L1 -4195 1652 918 2 822 22 0 0 0 chr13 31187424 31187446 -89096866 + AT_rich Low_complexity Low_complexity 1 22 0 2 822 384 154 50 71 chr13 31188104 31188312 -89096000 + (TATAA)n Simple_repeat Simple_repeat 1 203 0 2 822 289 168 97 14 chr13 31188228 31188373 -89095939 + (TA)n Simple_repeat Simple_repeat 1 157 0 3 822 4727 132 78 32 chr13 31188373 31189288 -89095024 - RMER17B LTR ERVK 0 958 2 3 822 266 175 138 0 chr13 31189702 31189782 -89094530 + L1M2 LINE L1 4240 4330 -1813 3 822 258 228 105 0 chr13 31189857 31189914 -89094398 - ID2 SINE ID -19 64 2 3 822 368 305 66 76 chr13 31189918 31190312 -89094000 + L1M2 LINE L1 4317 4706 -1437 3 822 402 290 62 0 chr13 31190315 31190491 -89093821 + L1M2 LINE L1 4658 4844 -1299 3 822 1046 288 50 16 chr13 31190577 31190955 -89093357 - RMER5 LTR ERV1 0 534 144 3 822 3140 53 10 2 chr13 31190981 31191374 -89092938 + MTB LTR MaLR 1 396 -4 3 822 3018 54 34 0 chr13 31191374 31191782 -89092530 - L1_Mus3 LINE L1 -567 6071 5650 3 822 2129 76 10 0 chr13 31191781 31192000 -89092312 + L1_Mus3 LINE L1 6159 6380 -258 3 822 459 0 0 0 chr13 31192000 31192051 -89092261 + (CAAAC)n Simple_repeat Simple_repeat 2 52 0 3 822 2129 76 10 0 chr13 31192051 31192122 -89092190 + L1_Mus3 LINE L1 6381 6451 -187 3 822 1103 91 20 21 chr13 31192229 31192428 -89091884 + L1_Mus3 LINE L1 6391 6628 -10 3 822 481 250 47 88 chr13 31193367 31193538 -89090774 - RSINE1 SINE B4 0 165 2 3 822 898 132 53 0 chr13 31193841 31193993 -89090319 + B2_Mm2 SINE B2 2 161 -34 3 822 366 23 0 0 chr13 31194002 31194045 -89090267 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 3 822 31 76 0 0 chr13 31194867 31194933 -89089379 + AT_rich Low_complexity Low_complexity 1 66 0 3 823 817 198 128 5 chr13 31195192 31195380 -89088932 - B3 SINE B2 -4 212 2 3 823 474 248 82 14 chr13 31195868 31196015 -89088297 - RSINE1 SINE B4 -5 160 4 3 823 241 161 0 46 chr13 31196152 31196217 -89088095 + GA-rich Low_complexity Low_complexity 1 62 0 3 823 1805 139 89 0 chr13 31196886 31197188 -89087124 - ORR1A4 LTR MaLR 0 329 1 3 823 1372 256 123 42 chr13 31197846 31198807 -89085505 + L1MA5 LINE L1 5119 6144 -156 3 823 235 62 0 0 chr13 31199350 31199382 -89084930 - L1_Mus3 LINE L1 -767 5871 5840 3 823 377 163 314 0 chr13 31199399 31199485 -89084827 - MTEb LTR MaLR -37 342 230 3 823 540 0 0 0 chr13 31199956 31200016 -89084296 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 823 612 283 65 4 chr13 31200084 31200329 -89083983 - L1MB1 LINE L1 -91 6077 5818 3 823 294 276 0 0 chr13 31200342 31200418 -89083894 - PB1 SINE Alu -4 123 48 3 823 243 255 20 50 chr13 31200449 31200548 -89083764 - L1M4 LINE L1 -346 5828 5733 3 823 344 179 0 56 chr13 31201716 31201787 -89082525 + ID4 SINE ID 3 69 -14 3 823 252 0 0 0 chr13 31202229 31202257 -89082055 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 823 6481 38 0 0 chr13 31202643 31203408 -89080904 - L1Md_T LINE L1 -1 6581 5817 3 823 33389 60 7 1 chr13 31203439 31205588 -89078724 - L1Md_F2 LINE L1 0 6582 4416 3 823 195 69 0 0 chr13 31205588 31205617 -89078695 + (CATAT)n Simple_repeat Simple_repeat 3 31 0 3 823 33389 67 8 2 chr13 31205617 31208656 -89075656 - L1Md_F2 LINE L1 -1468 4415 1366 3 823 2640 47 6 205 chr13 31208656 31209143 -89075169 - RLTR10 LTR ERVK 0 390 1 3 823 33389 95 2 90 chr13 31209143 31210036 -89074276 - L1Md_F2 LINE L1 -4518 1365 555 3 823 529 260 79 28 chr13 31212635 31212813 -89071499 - B3A SINE B2 -11 187 1 3 823 27 0 0 0 chr13 31213007 31213034 -89071278 + AT_rich Low_complexity Low_complexity 1 27 0 3 823 1113 113 0 0 chr13 31214062 31214230 -89070082 + (TTCC)n Simple_repeat Simple_repeat 2 169 0 3 823 201 74 0 0 chr13 31214230 31214257 -89070055 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 823 289 319 14 0 chr13 31214622 31214694 -89069618 + ID4_ SINE ID 2 74 -9 3 823 693 272 451 11 chr13 31214938 31215195 -89069117 - ORR1D2 LTR MaLR 0 370 1 3 823 2315 192 29 41 chr13 31216184 31216668 -89067644 + RLTR16 LTR ERVK 16 493 -12 3 823 226 254 83 14 chr13 31217062 31217134 -89067178 + MER5B DNA MER1_type 47 123 -55 3 823 1896 157 0 75 chr13 31217680 31218025 -89066287 + ORR1C1 LTR MaLR 1 319 -59 3 823 723 184 0 0 chr13 31218032 31218173 -89066139 + CT-rich Low_complexity Low_complexity 1 141 0 3 823 17369 96 39 3 chr13 31218173 31221684 -89062628 - L1_Mus1 LINE L1 -5 6562 2912 3 823 8202 34 1 2 chr13 31221699 31222657 -89061655 - L1Md_F3 LINE L1 -14 6570 5614 3 823 7392 110 12 3 chr13 31222645 31223751 -89060561 - L1_Mus1 LINE L1 -2946 2937 1822 3 823 1154 190 62 42 chr13 31223758 31224017 -89060295 - Lx LINE L1 -212 6442 6179 3 823 836 140 0 8 chr13 31224411 31224541 -89059771 + Lx LINE L1 6179 6307 -347 3 823 365 268 102 34 chr13 31224826 31224957 -89059355 + MER2 DNA MER2_type 35 175 -170 3 823 964 305 12 90 chr13 31224957 31225368 -89058944 - MTEb LTR MaLR 0 379 1 3 823 1292 134 0 5 chr13 31226268 31226463 -89057849 - B2_Mm2 SINE B2 -1 194 1 3 823 5340 92 12 0 chr13 31226604 31227341 -89056971 - L1_Mus3 LINE L1 -3 6635 5890 3 823 541 267 131 4 chr13 31227885 31228122 -89056190 - MER2 DNA MER2_type -77 268 2 3 823 438 20 0 0 chr13 31228353 31228404 -89055908 + (TTA)n Simple_repeat Simple_repeat 2 52 0 3 823 494 235 14 50 chr13 31228406 31228545 -89055767 - B1_Mur2 SINE Alu -15 134 1 3 823 927 149 0 7 chr13 31229243 31229385 -89054927 - B1_Mus1 SINE Alu -7 141 1 3 823 604 286 68 24 chr13 31229594 31229807 -89054505 - L1MA6 LINE L1 -123 6177 5952 3 823 409 283 9 17 chr13 31229807 31229922 -89054390 - PB1D10 SINE Alu -3 114 1 3 823 604 286 68 24 chr13 31229922 31230045 -89054267 - L1MA6 LINE L1 -349 5951 5826 3 823 440 218 0 0 chr13 31230287 31230365 -89053947 + ID4_ SINE ID 2 79 -4 3 823 189 171 0 0 chr13 31230366 31230401 -89053911 + (CCA)n Simple_repeat Simple_repeat 1 35 0 3 823 685 175 234 23 chr13 31231409 31231584 -89052728 - B3 SINE B2 -4 212 1 3 823 440 331 130 16 chr13 31231588 31231904 -89052408 - L1MB1 LINE L1 -341 5827 5476 3 823 41495 10 4 6 chr13 31231905 31238100 -89046212 - L1Md_A LINE L1 0 6582 415 3 823 445 267 75 31 chr13 31238134 31238362 -89045950 - L1_Rod LINE L1 -477 5370 5133 3 823 651 37 0 0 chr13 31239013 31239095 -89045217 + (TC)n Simple_repeat Simple_repeat 2 83 0 3 823 323 289 11 11 chr13 31239361 31239452 -89044860 + Tigger7 DNA MER2_type 5 95 -2396 3 823 258 276 164 7 chr13 31239482 31239628 -89044684 + Tigger7 DNA MER2_type 2315 2483 -8 3 823 326 123 18 0 chr13 31241926 31241983 -89042329 + (TTTG)n Simple_repeat Simple_repeat 2 59 0 3 823 234 330 55 0 chr13 31243356 31243447 -89040865 + L1M2 LINE L1 2224 2319 -4530 3 823 768 284 52 6 chr13 31243544 31243641 -89040671 + L1M2 LINE L1 4711 4808 -2037 3 823 3464 35 0 0 chr13 31243641 31244043 -89040269 - L1Md_T LINE L1 0 6582 6181 3 823 768 275 50 4 chr13 31244043 31244254 -89040058 + L1M2 LINE L1 4806 5029 -1813 3 823 343 328 0 21 chr13 31244310 31244450 -89039862 - Lx7 LINE L1 -1509 6187 6051 3 823 438 185 22 44 chr13 31244491 31244564 -89039748 - RMER17C LTR ERVK -133 277 204 3 823 263 26 0 49 chr13 31244564 31244605 -89039707 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 3 823 438 185 22 44 chr13 31244605 31244712 -89039600 - RMER17C LTR ERVK -207 203 101 3 823 567 260 29 16 chr13 31244746 31244958 -89039354 - Lx7 LINE L1 -1686 5958 5743 3 823 1585 253 68 18 chr13 31244956 31246016 -89038296 - Lx6 LINE L1 -136 7324 5908 3 823 533 254 37 11 chr13 31246010 31246201 -89038111 - Lx6 LINE L1 -523 5357 5162 3 823 1120 293 109 45 chr13 31246201 31247108 -89037204 + L1_Rod LINE L1 4881 5845 -2 3 823 549 0 0 0 chr13 31247126 31247187 -89037125 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 3 823 521 296 41 14 chr13 31247356 31247503 -89036809 + RSINE1 SINE B4 2 152 -13 3 823 696 317 61 16 chr13 31247571 31247946 -89036366 - Lx6 LINE L1 -2182 3698 3307 3 823 973 214 44 103 chr13 31247969 31248177 -89036135 + Lx9 LINE L1 7271 7484 -160 3 823 405 0 0 0 chr13 31248177 31248222 -89036090 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 823 366 42 0 0 chr13 31248222 31248269 -89036043 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 823 973 214 44 103 chr13 31248269 31248330 -89035982 + Lx9 LINE L1 7485 7520 -124 3 823 381 99 24 12 chr13 31248330 31248412 -89035900 + (TA)n Simple_repeat Simple_repeat 1 83 0 3 823 315 0 0 0 chr13 31248412 31248446 -89035866 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 823 973 214 44 103 chr13 31248446 31248563 -89035749 + Lx9 LINE L1 7521 7635 -9 3 823 577 200 97 30 chr13 31248622 31248756 -89035556 - B1_Mur1 SINE Alu 0 149 7 3 823 285 130 0 0 chr13 31248748 31248794 -89035518 + B3 SINE B2 147 192 -24 3 823 360 291 140 1 chr13 31248815 31248904 -89035408 + Lx8 LINE L1 4640 4751 -1129 3 823 324 0 0 0 chr13 31248904 31248940 -89035372 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 823 360 286 158 0 chr13 31248940 31248993 -89035319 + Lx8 LINE L1 4752 4825 -1055 3 823 502 293 7 7 chr13 31249134 31249275 -89035037 + RSINE1 SINE B4 5 145 -20 3 823 3034 291 48 77 chr13 31249641 31251361 -89032951 + Lx8 LINE L1 5408 7114 -359 3 823 405 303 39 26 chr13 31251367 31251523 -89032789 + MER2 DNA MER2_type 188 345 0 3 823 652 123 18 0 chr13 31253225 31253339 -89030973 + (GA)n Simple_repeat Simple_repeat 2 117 0 3 823 337 162 31 3 chr13 31253341 31253411 -89030901 + L1MD LINE L1 5372 5441 -721 3 823 261 335 183 42 chr13 31253449 31253782 -89030530 - MLT1B LTR MaLR -10 380 1 3 823 634 191 87 14 chr13 31253783 31253921 -89030391 + L1MC LINE L1 5615 5762 -582 3 823 1895 117 17 0 chr13 31253967 31254266 -89030046 - Lx2 LINE L1 0 6997 6694 3 823 897 139 85 17 chr13 31254446 31254622 -89029690 - B2_Mm2 SINE B2 -7 188 1 3 823 1539 274 98 48 chr13 31255802 31256411 -89027901 - MER73 LTR ERVL -4 640 1 3 823 819 295 39 57 chr13 31256697 31257085 -89027227 + MLT1B LTR MaLR 4 384 -6 3 823 1346 97 11 0 chr13 31257125 31257310 -89027002 - B2_Mm1t SINE B2 -5 188 2 3 823 203 255 0 0 chr13 31258755 31258802 -89025510 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 823 1571 157 118 33 chr13 31259522 31259852 -89024460 + ORR1B2 LTR MaLR 1 358 -9 3 823 423 98 0 0 chr13 31261167 31261228 -89023084 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 3 823 944 293 24 3 chr13 31261315 31261606 -89022706 - RMER15 LTR ERVL -3 572 276 3 823 338 212 47 78 chr13 31261602 31261730 -89022582 - RMER15 LTR ERVL -415 160 37 3 823 412 301 16 33 chr13 31261841 31262023 -89022289 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 3 823 779 57 9 0 chr13 31262056 31262161 -89022151 + (TCTA)n Simple_repeat Simple_repeat 3 108 0 3 823 678 113 0 0 chr13 31263447 31263562 -89020750 + (TC)n Simple_repeat Simple_repeat 1 115 0 3 823 405 0 0 0 chr13 31263562 31263607 -89020705 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 823 248 258 44 29 chr13 31263607 31263675 -89020637 - ID4_ SINE ID -5 78 10 4 823 216 290 73 27 chr13 31263685 31263719 -89020593 - B1F1 SINE Alu -9 140 101 4 823 396 0 0 0 chr13 31263719 31263763 -89020549 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 823 216 290 73 27 chr13 31263763 31263838 -89020474 - B1F1 SINE Alu -49 100 26 4 823 25 0 0 0 chr13 31264853 31264878 -89019434 + AT_rich Low_complexity Low_complexity 1 25 0 4 823 514 260 165 31 chr13 31265116 31265370 -89018942 - MER2 DNA MER2_type -32 313 26 4 823 3694 57 82 4 chr13 31265954 31266431 -89017881 + L1_Mus2 LINE L1 6053 6566 0 4 823 231 88 0 0 chr13 31266684 31266718 -89017594 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 4 823 286 255 0 0 chr13 31266753 31266855 -89017457 + (TAGA)n Simple_repeat Simple_repeat 1 102 0 4 823 2793 144 36 0 chr13 31267549 31267999 -89016313 + RMER4A LTR ERVK 1 466 0 4 823 787 185 186 21 chr13 31268292 31268485 -89015827 + URR1B DNA MER1_type 1 225 0 4 823 229 320 13 0 chr13 31268753 31268828 -89015484 - ID4_ SINE ID -6 77 2 4 823 323 227 84 23 chr13 31269496 31269627 -89014685 + MLT1B LTR MaLR 60 198 -192 4 823 539 297 17 6 chr13 31269948 31270124 -89014188 + MLT1B LTR MaLR 201 378 -12 4 823 22 94 0 0 chr13 31271960 31272024 -89012288 + AT_rich Low_complexity Low_complexity 1 64 0 4 823 462 79 0 0 chr13 31272124 31272187 -89012125 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 4 823 12709 61 15 0 chr13 31273858 31275493 -89008819 + L1_Mm LINE L1 2977 4636 -1247 4 823 231 333 0 11 chr13 31276370 31276461 -89007851 - MER81 DNA AcHobo -20 94 5 4 823 576 0 0 0 chr13 31277880 31277944 -89006368 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 823 243 0 0 0 chr13 31278398 31278425 -89005887 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 823 675 78 0 0 chr13 31278425 31278527 -89005785 + (GA)n Simple_repeat Simple_repeat 2 104 0 4 823 286 297 0 21 chr13 31279576 31279669 -89004643 - MLT1B LTR MaLR -57 333 243 4 823 742 223 102 15 chr13 31280354 31280550 -89003762 - B3 SINE B2 0 216 4 4 823 253 366 0 0 chr13 31281806 31281888 -89002424 - ID4 SINE ID 0 83 2 4 823 189 107 0 0 chr13 31281893 31281921 -89002391 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 823 230 335 64 26 chr13 31282190 31282346 -89001966 + LTR50 LTR ERVL 471 632 -163 4 823 2120 267 43 7 chr13 31285131 31285690 -88998622 + Lx7 LINE L1 6804 7382 -314 4 823 303 162 70 42 chr13 31285813 31285884 -88998428 + HAL1-3A_ME LINE L1 1979 2051 -807 4 823 579 66 0 0 chr13 31286060 31286136 -88998176 + (TC)n Simple_repeat Simple_repeat 1 76 0 4 823 246 288 169 0 chr13 31287064 31287182 -88997130 + LTR33A LTR ERVL 240 377 -143 4 823 468 0 0 0 chr13 31287382 31287434 -88996878 + (TTA)n Simple_repeat Simple_repeat 1 52 0 4 823 230 270 41 57 chr13 31288956 31289078 -88995234 - MLT1A1 LTR MaLR -288 120 1 4 823 236 306 41 0 chr13 31289105 31289203 -88995109 - L2a LINE L2 -9 3417 3316 4 823 492 32 0 0 chr13 31289236 31289298 -88995014 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 823 285 98 0 0 chr13 31289852 31289893 -88994419 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 4 823 334 252 46 55 chr13 31290087 31290196 -88994116 - ORR1E LTR MaLR -242 117 10 4 823 403 342 30 47 chr13 31290196 31290432 -88993880 + L1MC4a LINE L1 6662 6893 -989 4 823 2655 68 6 17 chr13 31291715 31292076 -88992236 + L1_Mus2 LINE L1 6208 6564 -2 4 823 1236 107 11 0 chr13 31292098 31292275 -88992037 + B2_Mm1t SINE B2 1 179 -14 4 823 580 83 21 0 chr13 31292295 31292391 -88991921 + (TCTA)n Simple_repeat Simple_repeat 1 98 0 4 823 785 242 41 5 chr13 31292391 31292586 -88991726 - B3 SINE B2 -14 202 1 4 823 1611 62 40 0 chr13 31292711 31292765 -88991547 - ORR1A1 LTR MaLR 0 346 293 4 823 180 0 0 0 chr13 31292765 31292785 -88991527 + (TA)n Simple_repeat Simple_repeat 1 20 0 4 823 1611 62 40 0 chr13 31292785 31292956 -88991356 - ORR1A1 LTR MaLR -54 292 113 4 823 641 123 0 9 chr13 31294174 31294281 -88990031 + (TCC)n Simple_repeat Simple_repeat 3 108 0 4 823 520 236 0 67 chr13 31294281 31294431 -88989881 + RMER10B LTR ERVL 196 335 -63 4 823 711 121 35 14 chr13 31294433 31294575 -88989737 + (TATATG)n Simple_repeat Simple_repeat 2 146 0 4 823 387 83 0 0 chr13 31294588 31294648 -88989664 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 823 261 0 0 0 chr13 31294648 31294676 -88989636 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 823 252 0 0 0 chr13 31294676 31294703 -88989609 + (GA)n Simple_repeat Simple_repeat 2 29 0 4 823 449 191 0 0 chr13 31294885 31294969 -88989343 + MTC LTR MaLR 329 412 -9 4 823 285 150 50 10 chr13 31295019 31295120 -88989192 + (CA)n Simple_repeat Simple_repeat 1 105 0 4 823 335 197 10 96 chr13 31295122 31295319 -88988993 + (CATA)n Simple_repeat Simple_repeat 1 180 0 4 823 189 89 67 0 chr13 31295340 31295385 -88988927 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 823 302 162 14 0 chr13 31296576 31296650 -88987662 + CT-rich Low_complexity Low_complexity 2 76 0 4 823 247 299 15 0 chr13 31296696 31296763 -88987549 + CT-rich Low_complexity Low_complexity 5 72 0 4 823 570 262 15 31 chr13 31296790 31296920 -88987392 + RSINE1 SINE B4 14 141 -24 4 823 323 264 28 19 chr13 31297424 31297532 -88986780 - PB1D10 SINE Alu -8 109 1 4 823 222 91 0 0 chr13 31297820 31297853 -88986459 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 4 823 189 107 0 0 chr13 31299600 31299628 -88984684 + (T)n Simple_repeat Simple_repeat 1 28 0 4 823 24 32 0 0 chr13 31300569 31300600 -88983712 + AT_rich Low_complexity Low_complexity 1 31 0 4 823 302 290 0 45 chr13 31301476 31301588 -88982724 + CT-rich Low_complexity Low_complexity 5 111 0 4 823 824 229 52 16 chr13 31302624 31302815 -88981497 - B3 SINE B2 -17 199 2 4 823 1015 66 73 0 chr13 31302849 31302986 -88981326 - B1_Mm SINE Alu 0 147 1 4 823 1285 51 23 0 chr13 31303210 31303386 -88980926 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 823 1968 198 5 10 chr13 31303626 31303997 -88980315 - MTC LTR MaLR 0 421 50 4 823 493 66 26 0 chr13 31303997 31304073 -88980239 + L1Md_F2 LINE L1 6493 6570 -12 4 823 1968 198 5 10 chr13 31304073 31304084 -88980228 - MTC LTR MaLR -372 49 41 4 823 224 120 20 0 chr13 31304094 31304144 -88980168 + (CAAAAA)n Simple_repeat Simple_repeat 5 55 0 4 823 207 0 0 0 chr13 31304230 31304253 -88980059 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 823 261 239 22 33 chr13 31304502 31304593 -88979719 - PB1D10 SINE Alu -1 116 27 4 823 24 0 0 0 chr13 31305287 31305311 -88979001 + AT_rich Low_complexity Low_complexity 1 24 0 4 823 228 301 169 0 chr13 31306801 31306884 -88977428 - PB1D7 SINE Alu -12 108 12 4 823 271 140 82 99 chr13 31307048 31307230 -88977082 + (CACAG)n Simple_repeat Simple_repeat 1 179 0 4 823 380 65 66 124 chr13 31307241 31307625 -88976687 + (CACAG)n Simple_repeat Simple_repeat 1 361 0 4 823 426 153 11 69 chr13 31307634 31307823 -88976489 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 823 336 159 0 79 chr13 31307966 31308144 -88976168 + (CA)n Simple_repeat Simple_repeat 1 164 0 4 823 278 175 0 78 chr13 31308246 31308413 -88975899 + (CA)n Simple_repeat Simple_repeat 1 154 0 4 823 506 306 85 15 chr13 31308663 31309005 -88975307 + L1MC3 LINE L1 7403 7768 -17 4 823 2803 174 33 25 chr13 31310668 31311239 -88973073 + ORR1D2-int LTR MaLR 750 1325 -45 4 823 1202 242 88 18 chr13 31311313 31311641 -88972671 + ORR1D2 LTR MaLR 20 370 0 4 823 553 298 0 36 chr13 31311682 31311849 -88972463 + B3 SINE B2 2 162 -54 4 823 374 108 0 15 chr13 31311849 31311915 -88972397 + (CATA)n Simple_repeat Simple_repeat 2 66 0 4 823 23 0 0 0 chr13 31311926 31311949 -88972363 + AT_rich Low_complexity Low_complexity 1 23 0 4 823 1377 316 15 9 chr13 31312197 31312657 -88971655 + Lx8 LINE L1 6351 6813 -660 4 823 960 203 251 7 chr13 31312681 31312971 -88971341 - MTD LTR MaLR -13 406 46 4 823 721 324 109 57 chr13 31313020 31313633 -88970679 + Lx8 LINE L1 6827 7471 -2 4 823 327 85 0 0 chr13 31313687 31313734 -88970578 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 823 250 294 45 18 chr13 31313919 31314030 -88970282 - MIR SINE MIR -93 169 56 4 823 291 190 0 0 chr13 31314285 31314343 -88969969 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 823 525 146 0 0 chr13 31314342 31314465 -88969847 + (GA)n Simple_repeat Simple_repeat 2 124 0 4 823 1131 82 0 0 chr13 31315714 31315861 -88968451 + B1_Mm SINE Alu 1 147 0 4 823 477 0 0 0 chr13 31315992 31316045 -88968267 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 823 226 308 118 40 chr13 31316280 31316432 -88967880 - RSINE1 SINE B4 0 165 2 4 823 414 0 0 0 chr13 31316613 31316659 -88967653 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 823 1060 302 61 67 chr13 31316660 31317662 -88966650 - L1MA5A LINE L1 -356 5935 4874 4 823 890 257 61 12 chr13 31319185 31319512 -88964800 - L1MA6 LINE L1 -79 6221 5879 4 823 23 0 0 0 chr13 31320848 31320871 -88963441 + AT_rich Low_complexity Low_complexity 1 23 0 4 823 342 256 159 40 chr13 31321388 31321514 -88962798 - B3 SINE B2 -75 141 1 4 823 1572 203 58 26 chr13 31321531 31321911 -88962401 + MTD LTR MaLR 23 414 -5 4 823 1128 301 48 42 chr13 31322000 31322503 -88961809 + Lx8 LINE L1 6968 7473 0 4 823 467 266 139 10 chr13 31323627 31323821 -88960491 + MLT1D LTR MaLR 16 234 -271 4 823 948 123 6 12 chr13 31323899 31324064 -88960248 - RLTR11B LTR ERVK -289 164 1 4 823 375 307 54 27 chr13 31324064 31324247 -88960065 + MLT1D LTR MaLR 318 505 0 4 823 973 240 49 43 chr13 31324602 31324907 -88959405 - MT2A LTR ERVL -224 309 3 4 823 3074 12 0 0 chr13 31325235 31325572 -88958740 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 102 56865 23 11 7 chr13 31325572 31332018 -88952294 - IAPEz-int LTR ERVK 0 6481 8 4 824 3074 12 0 0 chr13 31332018 31332355 -88951957 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 824 690 282 53 126 chr13 31334227 31334625 -88949687 - MTE2a LTR MaLR -2 377 9 4 824 1649 150 15 73 chr13 31334628 31335089 -88949223 - RMER17C LTR ERVK -519 439 19 4 824 401 248 14 43 chr13 31335108 31335247 -88949065 + ORR1E LTR MaLR 7 141 -218 4 824 25 31 0 0 chr13 31335453 31335485 -88948827 + AT_rich Low_complexity Low_complexity 1 32 0 5 824 2111 182 8 8 chr13 31337912 31338306 -88946006 - MTD LTR MaLR -14 405 12 5 824 214 161 16 31 chr13 31338531 31338595 -88945717 + T-rich Low_complexity Low_complexity 5 67 0 5 824 1074 159 25 95 chr13 31339417 31339660 -88944652 + URR1A DNA MER1_type 1 226 0 5 824 519 60 0 0 chr13 31339687 31339754 -88944558 + (TCC)n Simple_repeat Simple_repeat 2 68 0 5 824 226 268 0 0 chr13 31340758 31340814 -88943498 + L1M5 LINE L1 5619 5674 -450 5 824 207 375 0 0 chr13 31340970 31341034 -88943278 + (CATG)n Simple_repeat Simple_repeat 3 66 0 5 824 202 205 0 0 chr13 31341006 31341045 -88943267 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 824 442 248 78 7 chr13 31341489 31341631 -88942681 - MER121 Unknown Unknown -220 192 41 5 824 239 174 0 0 chr13 31343692 31343738 -88940574 - MER57C2 LTR ERV1 -388 46 1 5 824 781 125 22 0 chr13 31344382 31344518 -88939794 - RLTR11A LTR ERVK 0 528 390 5 824 204 40 0 0 chr13 31344563 31344588 -88939724 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 5 824 1107 179 97 4 chr13 31344588 31344835 -88939477 + RLTR11A LTR ERVK 259 528 0 5 824 241 269 93 28 chr13 31344838 31344945 -88939367 + L1M4c LINE L1 49 162 -6222 5 824 385 264 205 26 chr13 31345573 31345802 -88938510 + Tigger5 DNA MER2_type 2137 2406 0 5 824 497 259 151 5 chr13 31347615 31347801 -88936511 - MLT1B LTR MaLR -171 219 7 5 824 279 296 80 0 chr13 31348715 31348803 -88935509 - PB1D9 SINE Alu -7 113 19 5 824 369 0 0 0 chr13 31348959 31349000 -88935312 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 824 234 62 0 0 chr13 31349000 31349031 -88935281 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 824 554 0 15 0 chr13 31349474 31349540 -88934772 + (GAAA)n Simple_repeat Simple_repeat 4 70 0 5 824 617 272 192 49 chr13 31350167 31350495 -88933817 - MTE2a LTR MaLR -4 375 1 5 824 286 264 55 0 chr13 31350896 31351006 -88933306 - PB1D7 SINE Alu 0 120 5 5 824 295 207 17 0 chr13 31353220 31353278 -88931034 - MTE2b LTR MaLR -312 67 9 5 824 1367 207 125 42 chr13 31353484 31353867 -88930445 + MTD LTR MaLR 5 419 0 5 824 300 326 111 0 chr13 31353930 31354111 -88930201 + MER2 DNA MER2_type 114 314 -31 5 824 209 108 0 26 chr13 31355553 31355591 -88928721 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 5 824 404 325 39 64 chr13 31355630 31356070 -88928242 - L1MEc LINE L1 -1312 5007 4579 5 824 246 288 0 17 chr13 31356503 31356563 -88927749 - L1MEc LINE L1 -6303 97 39 5 824 303 140 0 0 chr13 31356697 31356747 -88927565 + (GGA)n Simple_repeat Simple_repeat 3 52 0 5 824 21 36 0 0 chr13 31357202 31357230 -88927082 + AT_rich Low_complexity Low_complexity 1 28 0 5 824 3515 18 13 0 chr13 31357682 31358073 -88926239 - MTA_Mm LTR MaLR 0 396 1 5 824 1886 162 295 5 chr13 31358164 31358574 -88925738 + RLTR24 LTR ERV1 1 529 0 5 824 956 246 151 33 chr13 31358614 31358946 -88925366 - MTD LTR MaLR 0 419 49 5 824 255 93 0 0 chr13 31359228 31359271 -88925041 + (A)n Simple_repeat Simple_repeat 1 43 0 5 824 892 202 22 5 chr13 31359548 31359732 -88924580 + B3A SINE B2 12 198 0 5 824 590 49 12 0 chr13 31360475 31360557 -88923755 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 5 824 563 239 208 10 chr13 31360957 31361164 -88923148 + MER2 DNA MER2_type 3 250 -95 5 824 661 265 29 6 chr13 31361228 31361399 -88922913 + B3A SINE B2 14 188 -10 5 824 783 289 99 28 chr13 31361489 31362091 -88922221 - L1M2 LINE L1 -523 5768 5127 5 824 226 280 63 16 chr13 31362906 31363033 -88921279 + L1MC4a LINE L1 7676 7808 -74 5 824 237 320 0 0 chr13 31363172 31363250 -88921062 + (CCA)n Simple_repeat Simple_repeat 3 80 0 5 824 342 0 0 0 chr13 31363254 31363292 -88921020 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 824 342 0 0 0 chr13 31363292 31363329 -88920983 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 824 552 30 0 0 chr13 31363350 31363416 -88920896 + (GAAA)n Simple_repeat Simple_repeat 2 67 0 5 824 558 299 63 10 chr13 31363418 31363624 -88920688 + L1MA4 LINE L1 5825 6041 -259 5 824 300 137 0 0 chr13 31363828 31363879 -88920433 + (CAT)n Simple_repeat Simple_repeat 3 53 0 5 824 235 176 0 50 chr13 31364171 31364231 -88920081 + CT-rich Low_complexity Low_complexity 1 57 0 5 824 314 283 144 7 chr13 31364256 31364395 -88919917 - MER2 DNA MER2_type -50 295 138 5 824 357 305 14 7 chr13 31364491 31364633 -88919679 + L1MC4 LINE L1 7735 7877 -165 5 824 180 49 71 24 chr13 31365986 31366028 -88918284 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 824 467 190 52 0 chr13 31366150 31366266 -88918046 - ORR1E LTR MaLR -218 141 20 5 824 432 0 0 0 chr13 31368803 31368851 -88915461 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 824 257 295 14 16 chr13 31369347 31369441 -88914871 + MTEa LTR MaLR 278 370 -9 5 824 549 303 151 27 chr13 31369462 31369720 -88914592 + MLT1A0 LTR MaLR 56 345 -20 5 824 288 299 44 16 chr13 31371271 31371423 -88912889 + MIR SINE MIR 36 204 -64 5 824 498 196 101 5 chr13 31371427 31371561 -88912751 + MT2A LTR ERVL 1 134 -450 5 824 473 180 60 0 chr13 31371582 31371682 -88912630 + MT2A LTR ERVL 99 204 -329 5 824 243 88 0 0 chr13 31371707 31371741 -88912571 + (CATA)n Simple_repeat Simple_repeat 2 35 0 5 824 239 123 0 17 chr13 31371750 31371808 -88912504 + MT2A LTR ERVL 475 531 -2 5 824 282 301 128 6 chr13 31372169 31372333 -88911979 - MER2 DNA MER2_type -80 265 82 5 824 323 237 34 5 chr13 31372608 31372701 -88911611 + MIRc SINE MIR 55 152 -116 5 824 2709 59 5 50 chr13 31372704 31373081 -88911231 + L1_Mus2 LINE L1 6206 6565 -1 5 824 229 169 17 17 chr13 31373103 31373163 -88911149 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 824 624 156 0 0 chr13 31373445 31373554 -88910758 + (TA)n Simple_repeat Simple_repeat 1 109 0 5 824 440 18 18 0 chr13 31373938 31373995 -88910317 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 824 260 336 25 68 chr13 31375082 31375200 -88909112 - B4A SINE B4 0 292 180 5 824 410 18 53 0 chr13 31376955 31377012 -88907300 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 5 824 460 320 75 8 chr13 31377494 31377762 -88906550 - HERV16-int LTR ERVL -2916 2080 1795 5 824 282 321 19 19 chr13 31378081 31378189 -88906123 - Lx8 LINE L1 -1162 6311 6204 5 824 527 295 106 21 chr13 31378543 31378827 -88905485 - Lx8 LINE L1 -663 5217 4910 5 824 474 199 75 50 chr13 31378827 31378986 -88905326 + MTD-int LTR MaLR 1096 1258 0 5 824 1593 204 44 42 chr13 31379032 31379437 -88904875 + MTD LTR MaLR 12 417 -2 5 824 2230 267 62 33 chr13 31379437 31380315 -88903997 - Lx8 LINE L1 -1580 4300 3398 5 824 691 271 102 9 chr13 31380710 31380926 -88903386 + MER2 DNA MER2_type 103 338 -7 5 824 204 163 0 44 chr13 31382615 31382660 -88901652 + GA-rich Low_complexity Low_complexity 3 45 0 5 824 1210 112 0 6 chr13 31383059 31383238 -88901074 + B2_Mm2 SINE B2 2 179 -16 5 824 216 0 0 0 chr13 31383241 31383265 -88901047 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 824 1728 125 20 124 chr13 31383781 31384239 -88900073 + RMER17C LTR ERVK 1 410 0 5 824 520 177 34 34 chr13 31385849 31385966 -88898346 + PB1D7 SINE Alu 4 120 0 5 824 482 314 56 26 chr13 31385985 31386217 -88898095 + B4A SINE B4 33 271 -21 5 824 329 93 19 0 chr13 31386228 31386282 -88898030 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 824 311 288 188 73 chr13 31387967 31388255 -88896057 - MLT1B LTR MaLR 0 390 70 5 824 671 117 8 59 chr13 31388622 31388679 -88895633 + ORR1C1 LTR MaLR 31 83 -295 5 824 2734 160 28 88 chr13 31388679 31389283 -88895029 - RLTR12A LTR ERVK 0 568 1 5 824 671 164 395 42 chr13 31389283 31389497 -88894815 + ORR1C1 LTR MaLR 64 378 0 5 824 672 316 77 26 chr13 31389805 31390078 -88894234 + RMER15-int LTR ERVL 1340 1626 -3373 5 824 495 255 83 0 chr13 31390430 31390575 -88893737 + RMER15 LTR ERVL 419 575 0 5 824 181 256 155 24 chr13 31391785 31391869 -88892443 - L2a LINE L2 -55 3371 3277 5 824 180 0 0 0 chr13 31392605 31392625 -88891687 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 824 214 211 41 27 chr13 31392625 31392698 -88891614 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 5 824 2201 254 42 40 chr13 31392758 31393264 -88891048 + Lx7 LINE L1 6977 7491 -205 5 824 209 57 0 28 chr13 31393264 31393300 -88891012 + (TTGG)n Simple_repeat Simple_repeat 1 35 0 5 824 2201 254 42 40 chr13 31393300 31393326 -88890986 + Lx7 LINE L1 7492 7515 -181 5 824 1137 68 0 13 chr13 31393326 31393475 -88890837 - B1_Mm SINE Alu 0 147 1 5 824 2201 254 42 40 chr13 31393475 31393660 -88890652 + Lx7 LINE L1 7516 7696 0 5 824 874 94 7 14 chr13 31393702 31393842 -88890470 + (GAAA)n Simple_repeat Simple_repeat 2 140 0 5 824 358 171 26 79 chr13 31393846 31393960 -88890352 + Lx8 LINE L1 7346 7453 -20 5 824 320 279 30 77 chr13 31395747 31395980 -88888332 + RMER17A LTR ERVK 189 410 -341 5 824 887 308 94 48 chr13 31397156 31397639 -88886673 + Tigger7 DNA MER2_type 162 598 -1893 5 824 218 109 0 42 chr13 31398617 31398665 -88885647 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 5 824 230 324 70 35 chr13 31398748 31398863 -88885449 - ORR1E LTR MaLR -240 119 1 5 824 1444 274 24 0 chr13 31399009 31399385 -88884927 - L1MB3 LINE L1 -57 6126 5742 5 824 289 319 66 0 chr13 31401621 31401712 -88882600 - LTR78 LTR ERV1 -103 1201 1105 5 824 1861 156 53 66 chr13 31402688 31403065 -88881247 + ORR1C1 LTR MaLR 7 378 0 5 824 631 301 5 46 chr13 31403167 31403362 -88880950 + B3A SINE B2 1 187 -11 5 824 2020 55 20 0 chr13 31403413 31403666 -88880646 - L1_Mus1 LINE L1 0 6567 6310 5 824 836 169 82 104 chr13 31404203 31404434 -88879878 + URR1A DNA MER1_type 1 226 0 5 824 234 322 36 42 chr13 31406648 31406784 -88877528 + MTC LTR MaLR 223 414 -7 5 824 7491 46 7 0 chr13 31407357 31408246 -88876066 - L1_Mus1 LINE L1 0 6567 5673 5 824 424 310 166 6 chr13 31408481 31408656 -88875656 + RMER15 LTR ERVL 285 487 -88 5 824 968 248 117 19 chr13 31409348 31409664 -88874648 - MLT1B LTR MaLR -43 347 1 6 824 294 29 0 0 chr13 31409715 31409750 -88874562 + (TGGGGG)n Simple_repeat Simple_repeat 1 35 0 6 824 2839 97 188 35 chr13 31410618 31411098 -88873214 + MT2B LTR ERVL 13 565 -36 6 824 4282 215 73 14 chr13 31411253 31412195 -88872117 - ORR1D1-int LTR MaLR -297 1495 1 6 824 1104 182 25 10 chr13 31412241 31412441 -88871871 - ORR1D1 LTR MaLR -171 203 1 6 824 497 267 26 0 chr13 31413087 31413203 -88871109 - MER20 DNA MER1_type -62 157 39 6 824 504 48 0 0 chr13 31414227 31414290 -88870022 + (TCC)n Simple_repeat Simple_repeat 2 64 0 6 824 411 98 0 0 chr13 31414311 31414372 -88869940 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 824 727 239 163 4 chr13 31414830 31415186 -88869126 + L1MB2 LINE L1 5670 6090 -93 6 824 2299 58 0 3 chr13 31415464 31415757 -88868555 - L1Md_F2 LINE L1 -1 6581 6290 6 824 419 257 34 21 chr13 31416074 31416269 -88868043 - MER2 DNA MER2_type -7 338 86 6 824 186 208 0 0 chr13 31416336 31416384 -88867928 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 824 306 294 0 0 chr13 31416385 31416470 -88867842 + (CATATA)n Simple_repeat Simple_repeat 5 89 0 6 824 670 189 0 32 chr13 31416473 31416659 -88867653 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 824 550 291 129 26 chr13 31416663 31417160 -88867152 - L1MC4 LINE L1 -274 7608 7054 6 824 180 111 0 0 chr13 31417160 31417187 -88867125 + (TATATG)n Simple_repeat Simple_repeat 5 31 0 6 824 550 300 162 36 chr13 31417187 31417403 -88866909 - L1MC4 LINE L1 -989 7053 6822 6 824 31 0 0 0 chr13 31417809 31417840 -88866472 + AT_rich Low_complexity Low_complexity 1 31 0 6 824 295 108 46 0 chr13 31419300 31419365 -88864947 + (CACCC)n Simple_repeat Simple_repeat 4 71 0 6 824 366 93 37 85 chr13 31419894 31419914 -88864398 + ID_B1 SINE B4 68 145 -79 6 824 429 33 0 32 chr13 31419914 31419976 -88864336 + B1_Mur4 SINE Alu 1 60 -90 6 824 973 128 0 63 chr13 31420013 31420204 -88864108 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 6 824 353 98 197 0 chr13 31420129 31420261 -88864051 + (CAGG)n Simple_repeat Simple_repeat 2 159 0 6 824 271 158 112 56 chr13 31420264 31420371 -88863941 + RLTR25B LTR ERVK 397 509 -519 6 824 833 47 0 0 chr13 31420308 31420414 -88863898 + B1_Mus2 SINE Alu 42 147 0 6 824 791 188 7 20 chr13 31421166 31421313 -88862999 + B1_Mur1 SINE Alu 2 146 -3 6 824 333 265 0 0 chr13 31421988 31422071 -88862241 + PB1D10 SINE Alu 35 117 0 6 824 23 0 0 0 chr13 31422471 31422494 -88861818 + AT_rich Low_complexity Low_complexity 1 23 0 6 824 264 59 0 0 chr13 31425039 31425073 -88859239 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 824 573 289 0 0 chr13 31425305 31425433 -88858879 + RSINE1 SINE B4 3 130 -35 6 824 402 21 0 0 chr13 31427158 31427205 -88857107 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 6 824 420 287 18 80 chr13 31427320 31427483 -88856829 + MLT1A1 LTR MaLR 254 406 -2 6 824 422 265 257 44 chr13 31429526 31429954 -88854358 - L1MA9 LINE L1 -24 6288 5769 6 824 916 270 53 60 chr13 31429957 31429983 -88854329 - B4 SINE B4 -4 288 270 6 824 423 0 0 0 chr13 31429983 31430030 -88854282 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 824 916 270 53 60 chr13 31430030 31430287 -88854025 - B4 SINE B4 -23 269 7 6 824 582 207 0 0 chr13 31431052 31431221 -88853091 + (CA)n Simple_repeat Simple_repeat 2 170 0 6 824 205 286 97 18 chr13 31432855 31432969 -88851343 - MIRc SINE MIR -25 243 121 6 824 223 255 139 56 chr13 31434078 31434186 -88850126 + MIR SINE MIR 127 243 -19 6 824 740 267 20 40 chr13 31434298 31434497 -88849815 + B3A SINE B2 1 195 -3 6 824 761 206 28 10 chr13 31434968 31435148 -88849164 - MTC LTR MaLR 0 421 225 6 824 650 289 96 0 chr13 31435150 31435306 -88849006 + B3A SINE B2 1 171 -27 6 824 195 42 0 0 chr13 31435311 31435335 -88848977 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 824 297 0 0 0 chr13 31435423 31435456 -88848856 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 824 1771 239 97 105 chr13 31436663 31437416 -88846896 - Lx8 LINE L1 -2 7471 6725 6 824 2067 169 11 27 chr13 31437472 31437843 -88846469 - ORR1B2 LTR MaLR 0 367 3 6 824 990 211 5 10 chr13 31438449 31438650 -88845662 + Lx5 LINE L1 6847 7046 -4 6 824 591 247 132 34 chr13 31438988 31439193 -88845119 + Lx8 LINE L1 6334 6558 -915 6 824 493 280 21 7 chr13 31439210 31439354 -88844958 + Lx8 LINE L1 6834 6979 -494 6 824 364 280 38 165 chr13 31439352 31439643 -88844669 + Lx8 LINE L1 7219 7472 -1 6 824 661 284 33 28 chr13 31439684 31439898 -88844414 + ID_B1 SINE B4 3 217 -7 6 824 543 293 13 20 chr13 31440018 31440168 -88844144 + MT2A LTR ERVL 230 378 -155 6 824 290 338 75 7 chr13 31440195 31440341 -88843971 + MT2A LTR ERVL 338 493 -40 6 824 259 123 76 15 chr13 31440383 31440449 -88843863 + MT2A LTR ERVL 464 533 0 6 824 183 80 0 0 chr13 31440537 31440562 -88843750 + (A)n Simple_repeat Simple_repeat 1 25 0 6 824 227 294 53 21 chr13 31440660 31440754 -88843558 - MTE2a LTR MaLR -4 375 279 6 824 368 246 26 86 chr13 31442474 31442625 -88841687 - B1F1 SINE Alu -4 145 4 6 824 183 358 37 0 chr13 31442899 31442980 -88841332 + L2c LINE L2 3246 3329 -46 6 824 206 308 62 25 chr13 31443009 31443089 -88841223 + L2c LINE L2 3302 3384 -3 6 824 460 167 28 17 chr13 31443205 31443382 -88840930 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 6 824 354 23 0 0 chr13 31443404 31443447 -88840865 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 824 839 102 0 8 chr13 31443654 31443783 -88840529 + (TCTCCC)n Simple_repeat Simple_repeat 3 130 0 6 824 325 70 35 0 chr13 31444026 31444083 -88840229 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 824 629 253 43 43 chr13 31444661 31444847 -88839465 - MTE2b LTR MaLR -1 378 193 6 824 1392 200 115 143 chr13 31445292 31445708 -88838604 + RMER1B Other Other 21 430 -636 6 824 3123 72 10 19 chr13 31445708 31446119 -88838193 + MTB_Mm LTR MaLR 1 407 0 6 824 1392 209 106 123 chr13 31446119 31446260 -88838052 + RMER1B Other Other 431 536 -530 6 824 3130 225 65 143 chr13 31446261 31447361 -88836951 + RMER1A Other Other 1 1015 -15 6 824 644 288 74 0 chr13 31447370 31447533 -88836779 - MTE2b LTR MaLR -170 209 35 6 824 337 207 45 22 chr13 31447524 31447613 -88836699 - MTE2b LTR MaLR -287 92 2 6 824 236 183 119 24 chr13 31447681 31447765 -88836547 - Lx8 LINE L1 -29 7444 7353 6 824 202 100 19 39 chr13 31447868 31447920 -88836392 + A-rich Low_complexity Low_complexity 3 53 0 6 824 310 350 55 6 chr13 31448887 31449051 -88835261 + Tigger7 DNA MER2_type 2312 2483 -8 6 824 3090 76 8 2 chr13 31449128 31449526 -88834786 + MTB LTR MaLR 1 400 0 6 824 260 253 159 16 chr13 31451414 31451579 -88832733 - HERV16-int LTR ERVL -3264 2493 2266 6 824 376 299 86 86 chr13 31451724 31451969 -88832343 - HERV16-int LTR ERVL -2895 2101 1857 6 824 2093 165 58 5 chr13 31453492 31453887 -88830425 - MTC LTR MaLR 0 421 6 6 824 6606 92 20 16 chr13 31454731 31455681 -88828631 + RMER17B LTR ERVK 1 954 -4 6 824 782 118 0 22 chr13 31455767 31455905 -88828407 - RMER17B LTR ERVK -245 713 579 6 824 2086 150 67 6 chr13 31456907 31457263 -88827049 + ORR1C1 LTR MaLR 1 378 0 6 825 1695 228 54 5 chr13 31457526 31457918 -88826394 + MTD LTR MaLR 1 411 -8 6 825 252 342 0 0 chr13 31458290 31458369 -88825943 - ID4_ SINE ID -3 80 2 6 825 205 307 13 26 chr13 31458497 31458574 -88825738 - MIR3 SINE MIR -27 181 106 6 825 386 67 53 0 chr13 31459008 31459083 -88825229 + (CAA)n Simple_repeat Simple_repeat 3 81 0 6 825 1459 234 92 11 chr13 31459922 31460303 -88824009 - MTD LTR MaLR -5 414 3 6 825 321 26 0 0 chr13 31462445 31462483 -88821829 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 825 26 0 0 0 chr13 31462593 31462619 -88821693 + AT_rich Low_complexity Low_complexity 1 26 0 6 825 431 280 97 76 chr13 31463256 31463585 -88820727 - ORR1E LTR MaLR 0 359 24 6 825 831 85 17 17 chr13 31464643 31464762 -88819550 + PB1D9 SINE Alu 2 120 0 6 825 229 94 57 0 chr13 31464762 31464815 -88819497 + A-rich Low_complexity Low_complexity 5 60 0 6 825 4241 62 9 0 chr13 31465400 31465933 -88818379 - L1Md_F2 LINE L1 0 6582 6045 6 825 244 217 69 42 chr13 31465977 31466049 -88818263 + LTR33A LTR ERVL 73 146 -374 6 825 281 230 22 33 chr13 31468652 31468742 -88815570 + MLT1L LTR MaLR 515 603 -7 6 825 800 287 66 42 chr13 31469216 31469550 -88814762 - MLT1A0 LTR MaLR -21 344 3 6 825 270 270 13 13 chr13 31470987 31471062 -88813250 - ID2 SINE ID 0 83 9 6 825 25 0 0 0 chr13 31472129 31472154 -88812158 + AT_rich Low_complexity Low_complexity 1 25 0 6 825 1283 258 46 9 chr13 31472241 31472570 -88811742 - MTE2b LTR MaLR -23 356 16 6 825 25 0 0 0 chr13 31472828 31472853 -88811459 + AT_rich Low_complexity Low_complexity 1 25 0 6 825 757 185 14 14 chr13 31472887 31473035 -88811277 + B2_Mm2 SINE B2 17 164 -31 6 825 657 268 0 0 chr13 31473078 31473220 -88811092 - RSINE1 SINE B4 -13 152 11 6 825 550 264 16 25 chr13 31473741 31473932 -88810380 - L1MB5 LINE L1 -345 5988 5805 6 825 481 290 99 40 chr13 31473948 31474149 -88810163 - MER2 DNA MER2_type -14 331 119 6 825 231 366 0 0 chr13 31474386 31474457 -88809855 - PB1 SINE Alu -54 73 3 6 825 367 274 3 107 chr13 31474458 31474641 -88809671 - L1MB5 LINE L1 -458 5726 5567 6 825 731 254 54 34 chr13 31474673 31474877 -88809435 - B3 SINE B2 -8 208 1 6 825 39339 5 0 0 chr13 31474922 31480502 -88803810 + L1Md_A LINE L1 7 5586 -297 6 825 9239 1 0 0 chr13 31480502 31481498 -88802814 + L1Md_A LINE L1 5587 6582 0 6 825 324 0 0 0 chr13 31481521 31481557 -88802755 + (A)n Simple_repeat Simple_repeat 1 36 0 6 825 1441 209 56 26 chr13 31481566 31481905 -88802407 - L1_Rod LINE L1 -214 5633 5285 6 825 1784 220 38 13 chr13 31481906 31482302 -88802010 + Lx9 LINE L1 7067 7472 -172 6 825 429 20 0 0 chr13 31482306 31482356 -88801956 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 825 526 306 27 9 chr13 31482463 31482687 -88801625 - L1MA10 LINE L1 -30 6304 6077 6 825 771 112 22 0 chr13 31483616 31483750 -88800562 + (GA)n Simple_repeat Simple_repeat 2 138 0 6 825 371 276 33 92 chr13 31483879 31484063 -88800249 + MLT1A LTR MaLR 24 196 -178 7 825 245 242 93 57 chr13 31484762 31484902 -88799410 - LTR48 LTR ERV1 -25 762 618 7 825 264 318 16 91 chr13 31484925 31485046 -88799266 + PB1D10 SINE Alu 1 112 -5 7 825 207 162 0 0 chr13 31485047 31485084 -88799228 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 7 825 7389 67 17 33 chr13 31486291 31487409 -88796903 + L1_Mus1 LINE L1 5464 6567 0 7 825 271 308 76 17 chr13 31487649 31487768 -88796544 + MLT1A LTR MaLR 268 393 -15 7 825 285 29 0 0 chr13 31488951 31488985 -88795327 + (T)n Simple_repeat Simple_repeat 1 34 0 7 825 504 241 121 40 chr13 31490042 31490241 -88794071 + B4A SINE B4 3 217 -75 7 825 396 0 0 0 chr13 31490264 31490308 -88794004 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 825 564 15 0 0 chr13 31490836 31490901 -88793411 + (TGGA)n Simple_repeat Simple_repeat 1 65 0 7 825 366 23 0 0 chr13 31491958 31492001 -88792311 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 825 232 302 104 64 chr13 31492007 31492209 -88792103 + MLT1J1 LTR MaLR 67 276 -168 7 825 198 0 0 0 chr13 31493173 31493195 -88791117 + (T)n Simple_repeat Simple_repeat 1 22 0 7 825 465 345 62 7 chr13 31494383 31494675 -88789637 - MER2 DNA MER2_type 0 345 38 7 825 231 180 0 47 chr13 31497205 31497269 -88787043 + CT-rich Low_complexity Low_complexity 1 61 0 7 825 284 252 195 4 chr13 31499404 31499611 -88784701 + L1MDb LINE L1 1137 1384 -5118 7 825 623 236 87 90 chr13 31502646 31502935 -88781377 + LTR55 LTR ERV 6 293 -255 1 825 1107 196 185 32 chr13 31503607 31503956 -88780356 - MTD LTR MaLR -14 405 5 2 825 323 294 73 40 chr13 31504665 31504842 -88779470 + L1M5 LINE L1 4588 4770 -1376 3 825 180 0 0 0 chr13 31505033 31505053 -88779259 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 4 825 230 247 54 43 chr13 31505669 31505762 -88778550 - MLT1A1 LTR MaLR -12 396 303 5 825 252 0 0 0 chr13 31507015 31507043 -88777269 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 825 259 269 38 25 chr13 31507139 31507219 -88777093 - MER58B DNA MER1_type -36 305 225 7 825 367 299 159 0 chr13 31507492 31507649 -88776663 + MER58A DNA MER1_type 43 224 0 8 825 196 179 13 13 chr13 31509645 31509724 -88774588 + (CAAA)n Simple_repeat Simple_repeat 2 80 0 9 825 331 340 14 14 chr13 31510367 31510513 -88773799 + CT-rich Low_complexity Low_complexity 5 150 0 1 825 260 350 74 12 chr13 31511882 31512044 -88772268 - MER63A DNA AcHobo -3 207 36 1 825 472 309 55 43 chr13 31512488 31512833 -88771479 - Charlie1a DNA MER1_type -209 1246 898 1 825 600 53 0 0 chr13 31512911 31512987 -88771325 + (GA)n Simple_repeat Simple_repeat 1 76 0 1 825 351 271 58 8 chr13 31513906 31514103 -88770209 - L1ME1 LINE L1 -384 5907 5687 1 825 300 53 0 0 chr13 31514143 31514181 -88770131 - HAL1-3A_ME LINE L1 -846 2012 1975 1 825 609 110 0 0 chr13 31514181 31514272 -88770040 + (TA)n Simple_repeat Simple_repeat 2 92 0 1 825 1597 222 32 3 chr13 31514272 31514619 -88769693 + MTD LTR MaLR 49 405 -14 1 825 363 217 43 11 chr13 31516117 31516210 -88768102 + PB1D10 SINE Alu 22 117 0 1 825 987 93 0 0 chr13 31516537 31516699 -88767613 + (TG)n Simple_repeat Simple_repeat 2 163 0 1 825 237 236 0 18 chr13 31516967 31517023 -88767289 - PB1D10 SINE Alu -49 68 14 2 825 233 323 0 48 chr13 31517023 31517071 -88767241 - ID_B1 SINE B4 -75 149 51 2 825 777 256 72 0 chr13 31517426 31517621 -88766691 + B3 SINE B2 1 209 -7 2 825 234 0 0 0 chr13 31519248 31519274 -88765038 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 825 1499 233 51 75 chr13 31519624 31520116 -88764196 + RLTR28B LTR ERVL 2 481 0 2 825 242 253 89 0 chr13 31521706 31521785 -88762527 - MLT1G1 LTR MaLR -180 399 314 2 825 788 204 6 0 chr13 31522282 31522458 -88761854 + GA-rich Low_complexity Low_complexity 1 177 0 2 825 422 101 14 0 chr13 31522460 31522529 -88761783 + (GGAGA)n Simple_repeat Simple_repeat 1 70 0 2 825 1236 89 0 0 chr13 31522529 31522709 -88761603 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 2 825 252 0 0 0 chr13 31523245 31523273 -88761039 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 2 825 574 225 182 9 chr13 31523344 31523564 -88760748 + MER2 DNA MER2_type 88 345 0 3 825 243 0 0 0 chr13 31525256 31525283 -88759029 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 825 423 245 26 19 chr13 31525778 31525899 -88758413 - B1F2 SINE Alu -27 120 1 3 825 901 229 39 10 chr13 31525926 31526133 -88758179 - B3 SINE B2 0 216 4 3 825 32 0 0 0 chr13 31526347 31526379 -88757933 + AT_rich Low_complexity Low_complexity 1 32 0 3 825 376 234 134 64 chr13 31526806 31526993 -88757319 + Tigger7 DNA MER2_type 2278 2477 -14 3 825 315 329 39 26 chr13 31529586 31529739 -88754573 + MER20 DNA MER1_type 65 219 0 3 825 231 245 0 0 chr13 31529748 31529801 -88754511 - MTEa LTR MaLR -13 366 314 3 825 380 182 11 0 chr13 31529804 31529892 -88754420 + GA-rich Low_complexity Low_complexity 2 90 0 3 825 603 285 173 20 chr13 31529894 31530148 -88754164 - MTEa LTR MaLR -56 323 31 3 825 464 273 8 8 chr13 31530946 31531068 -88753244 + ID_B1 SINE B4 82 203 -21 3 825 397 269 18 147 chr13 31531068 31531116 -88753196 + B1F SINE Alu 1 148 -1 4 825 366 275 0 0 chr13 31531129 31531209 -88753103 + ID4_ SINE ID 3 82 -1 4 825 270 0 0 0 chr13 31532929 31532959 -88751353 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 825 198 0 0 0 chr13 31532959 31532980 -88751332 + (CGTG)n Simple_repeat Simple_repeat 3 24 0 4 825 316 239 47 79 chr13 31533216 31533289 -88751023 + L1MEg LINE L1 1254 1319 -4765 4 825 959 272 14 55 chr13 31533289 31533581 -88750731 - B4 SINE B4 -10 282 3 4 825 316 239 47 79 chr13 31533581 31533634 -88750678 + L1MEg LINE L1 1320 1376 -4708 4 825 645 237 72 0 chr13 31533638 31533777 -88750535 + B3A SINE B2 3 151 -47 4 825 2121 114 6 71 chr13 31533777 31534127 -88750185 - ORR1A2 LTR MaLR 0 327 1 4 825 207 0 0 0 chr13 31534146 31534169 -88750143 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 825 27 20 0 57 chr13 31534171 31534224 -88750088 + AT_rich Low_complexity Low_complexity 1 50 0 4 825 495 300 49 16 chr13 31534406 31534589 -88749723 - RMER30 DNA MER1_type -1 201 13 5 825 397 206 28 85 chr13 31535034 31535140 -88749172 - PB1D9 SINE Alu -10 110 11 5 825 386 245 101 28 chr13 31535877 31535986 -88748326 + PB1D7 SINE Alu 3 119 -1 5 825 188 86 0 28 chr13 31535986 31536022 -88748290 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 5 825 205 246 16 16 chr13 31536456 31536518 -88747794 + (TAGA)n Simple_repeat Simple_repeat 3 64 0 5 825 305 233 14 14 chr13 31537516 31537590 -88746722 + L1MEc LINE L1 711 784 -5616 5 825 377 262 234 0 chr13 31537607 31537773 -88746539 + ID_B1 SINE B4 16 220 -4 5 825 771 175 0 7 chr13 31538180 31538324 -88745988 - URR1B DNA MER1_type 0 225 83 5 825 271 326 0 30 chr13 31539872 31539973 -88744339 + MTE2a LTR MaLR 268 365 -14 5 825 663 13 0 0 chr13 31540284 31540360 -88743952 + (TC)n Simple_repeat Simple_repeat 2 77 0 5 825 1157 65 0 0 chr13 31540362 31540501 -88743811 - B1_Mm SINE Alu -7 140 2 6 825 1212 55 0 0 chr13 31541462 31541608 -88742704 + B1_Mus2 SINE Alu 2 147 0 6 825 222 37 0 0 chr13 31541708 31541735 -88742577 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 825 225 0 0 0 chr13 31541735 31541760 -88742552 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 825 390 290 181 14 chr13 31542096 31542372 -88741940 + L1M5 LINE L1 2688 3009 -3137 6 825 1746 165 143 3 chr13 31543288 31543610 -88740702 - ORR1B2 LTR MaLR 0 367 1 6 825 180 0 0 0 chr13 31543671 31543691 -88740621 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6 825 269 283 91 24 chr13 31543824 31543987 -88740325 + MIRb SINE MIR 45 221 -47 6 825 1486 267 66 25 chr13 31544424 31544862 -88739450 + Lx8 LINE L1 6461 6916 -557 6 825 8844 40 1 1 chr13 31545645 31546711 -88737601 - L1Md_F2 LINE L1 -388 5495 4430 6 825 666 85 0 0 chr13 31546708 31546790 -88737522 + L1Md_F2 LINE L1 5508 5589 -294 6 825 8141 43 4 8 chr13 31546790 31547786 -88736526 + L1Md_F2 LINE L1 5591 6582 0 6 825 1092 254 67 52 chr13 31549780 31550199 -88734113 + RLTR11A LTR ERVK 103 527 -1 7 825 262 75 37 19 chr13 31550670 31550724 -88733588 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 7 825 405 0 0 0 chr13 31550770 31550815 -88733497 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 825 314 283 17 50 chr13 31551190 31551309 -88733003 - MLT1A0 LTR MaLR -23 342 228 7 825 364 285 152 25 chr13 31551340 31551538 -88732774 + Tigger7 DNA MER2_type 2257 2479 -12 7 825 21 57 0 0 chr13 31551925 31551960 -88732352 + AT_rich Low_complexity Low_complexity 1 35 0 7 825 1300 167 144 35 chr13 31552350 31552475 -88731837 - Lx9 LINE L1 0 7644 7518 7 825 333 0 0 0 chr13 31552475 31552512 -88731800 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 825 1300 167 144 35 chr13 31552512 31552727 -88731585 - Lx9 LINE L1 -127 7517 7269 7 825 1446 149 52 4 chr13 31554310 31554559 -88729753 + Lx9 LINE L1 6746 7006 -638 7 825 1325 169 3 59 chr13 31554559 31554879 -88729433 + Lx9 LINE L1 7343 7644 0 7 825 235 235 0 0 chr13 31555483 31555534 -88728778 + GA-rich Low_complexity Low_complexity 1 51 0 7 825 404 276 48 8 chr13 31555784 31555908 -88728404 - MLT1A LTR MaLR -235 139 11 8 825 339 213 154 43 chr13 31556233 31556395 -88727917 - MER53 DNA hAT -1 192 13 8 825 548 295 96 59 chr13 31556728 31556998 -88727314 - Tigger7 DNA MER2_type -7 2484 2205 8 825 1068 206 19 5 chr13 31557694 31557899 -88726413 - B3 SINE B2 -7 209 2 8 825 202 209 0 23 chr13 31557913 31557957 -88726355 + GA-rich Low_complexity Low_complexity 1 43 0 8 825 273 193 17 17 chr13 31559196 31559254 -88725058 + ORR1E LTR MaLR 256 313 -46 8 825 5743 147 23 31 chr13 31560602 31561636 -88722676 - Lx3C LINE L1 -2 6974 5949 8 825 471 332 51 14 chr13 31561650 31561864 -88722448 + Tigger5 DNA MER2_type 15 236 -2170 8 825 224 275 14 14 chr13 31561957 31562027 -88722285 + (TATATG)n Simple_repeat Simple_repeat 2 71 0 8 825 2334 186 111 111 chr13 31562754 31563432 -88720880 + Lx9 LINE L1 6897 7574 -70 8 825 476 354 48 63 chr13 31563973 31564564 -88719748 + L1M5 LINE L1 4422 5014 -1129 9 825 251 302 96 32 chr13 31566079 31566267 -88718045 + L1M5 LINE L1 5703 5902 -262 9 825 350 227 74 52 chr13 31566514 31566649 -88717663 + L1ME2z LINE L1 6138 6275 -169 9 825 351 0 0 0 chr13 31568045 31568084 -88716228 + (TAAA)n Simple_repeat Simple_repeat 4 42 0 9 825 259 300 0 0 chr13 31570806 31570866 -88713446 + B1F1 SINE Alu 1 60 -89 9 825 182 155 55 27 chr13 31570892 31570965 -88713347 + (CAGAGA)n Simple_repeat Simple_repeat 3 77 0 9 825 448 296 26 7 chr13 31571310 31571463 -88712849 + MER20 DNA MER1_type 49 204 -15 9 825 438 139 0 0 chr13 31571514 31571586 -88712726 + (TGGA)n Simple_repeat Simple_repeat 3 74 0 9 825 1017 145 0 0 chr13 31571607 31571786 -88712526 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 9 825 287 150 0 16 chr13 31572871 31572932 -88711380 + GA-rich Low_complexity Low_complexity 3 62 0 9 825 359 226 10 0 chr13 31573770 31573872 -88710440 + (TA)n Simple_repeat Simple_repeat 2 104 0 9 825 964 114 0 12 chr13 31574144 31574304 -88710008 + (GAA)n Simple_repeat Simple_repeat 3 160 0 9 825 192 97 0 0 chr13 31574306 31574337 -88709975 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 1 825 252 59 0 0 chr13 31574961 31574995 -88709317 + (TTAGGG)n Simple_repeat Simple_repeat 3 36 0 1 825 233 260 0 0 chr13 31576028 31576078 -88708234 + ID4 SINE ID 2 51 -32 1 825 513 0 0 0 chr13 31576283 31576340 -88707972 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 825 2600 33 0 0 chr13 31576821 31577123 -88707189 + L1Md_T LINE L1 6281 6582 0 1 825 189 302 121 23 chr13 31577577 31577709 -88706603 - L2a LINE L2 -27 3399 3255 1 825 22 35 0 0 chr13 31578892 31578921 -88705391 + AT_rich Low_complexity Low_complexity 1 29 0 1 825 373 252 89 20 chr13 31581083 31581184 -88703128 + PB1D10 SINE Alu 1 108 -9 1 825 777 261 89 8 chr13 31582948 31583207 -88701105 + B4A SINE B4 5 284 -8 1 825 614 79 20 0 chr13 31583231 31583332 -88700980 + (CAGAGA)n Simple_repeat Simple_repeat 6 108 0 1 825 786 238 127 7 chr13 31585707 31585954 -88698358 + L1MA5 LINE L1 5457 5733 -567 1 825 463 316 136 27 chr13 31585985 31586398 -88697914 + L1MA5 LINE L1 5843 6300 0 1 825 339 258 100 0 chr13 31586580 31586687 -88697625 + PB1D10 SINE Alu 1 117 0 1 826 2172 115 20 3 chr13 31590098 31590404 -88693908 + RLTR10E LTR ERVK 1 311 0 1 826 742 156 0 13 chr13 31591588 31591744 -88692568 + (CA)n Simple_repeat Simple_repeat 2 155 0 1 826 385 41 0 0 chr13 31591975 31592024 -88692288 + L1_Mus2 LINE L1 6517 6565 -1 1 826 525 296 136 11 chr13 31592207 31592487 -88691825 - Tigger7 DNA MER2_type -5 2486 2172 1 826 348 263 87 36 chr13 31593030 31593168 -88691144 + MIR SINE MIR 35 179 -83 1 826 237 302 96 48 chr13 31593506 31593631 -88690681 + L1MA8 LINE L1 6111 6241 -50 1 826 451 277 41 35 chr13 31593664 31593836 -88690476 + MLT1F2 LTR MaLR 388 560 0 1 826 270 179 0 0 chr13 31593847 31593903 -88690409 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 826 397 195 26 13 chr13 31594759 31594837 -88689475 + B3 SINE B2 128 206 -10 1 826 267 103 0 0 chr13 31595152 31595191 -88689121 + (CACG)n Simple_repeat Simple_repeat 1 39 0 1 826 252 0 0 0 chr13 31595541 31595569 -88688743 + (T)n Simple_repeat Simple_repeat 1 28 0 1 826 28 29 0 0 chr13 31595697 31595732 -88688580 + AT_rich Low_complexity Low_complexity 1 35 0 1 826 324 0 0 0 chr13 31596038 31596074 -88688238 + (A)n Simple_repeat Simple_repeat 1 36 0 1 826 1296 14 0 0 chr13 31596092 31596239 -88688073 + B1_Mm SINE Alu 1 147 0 1 826 186 43 0 0 chr13 31596244 31596267 -88688045 + (A)n Simple_repeat Simple_repeat 1 23 0 1 826 344 0 65 0 chr13 31596652 31596698 -88687614 + (TAAAA)n Simple_repeat Simple_repeat 2 50 0 1 826 315 259 49 62 chr13 31598021 31598190 -88686122 - MIR SINE MIR -89 173 16 1 826 1146 75 7 0 chr13 31599177 31599324 -88684988 + B1_Mus1 SINE Alu 1 148 0 1 826 507 73 0 0 chr13 31599324 31599392 -88684920 + (A)n Simple_repeat Simple_repeat 1 68 0 1 826 2780 73 65 3 chr13 31599524 31599895 -88684417 + MTA_Mm LTR MaLR 3 396 0 1 826 381 179 24 12 chr13 31599910 31599995 -88684317 - PB1D7 SINE Alu 0 120 35 1 826 455 132 175 0 chr13 31600323 31600437 -88683875 - Lx7 LINE L1 0 7696 7563 1 826 228 35 0 0 chr13 31600538 31600567 -88683745 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 826 604 286 112 55 chr13 31601586 31601952 -88682360 + MLT1B LTR MaLR 1 387 -3 1 826 755 257 0 118 chr13 31601999 31602237 -88682075 + B3 SINE B2 1 210 -6 1 826 1415 226 96 23 chr13 31602380 31602725 -88681587 + ORR1D2 LTR MaLR 1 370 0 1 826 189 0 0 0 chr13 31604883 31604904 -88679408 + (A)n Simple_repeat Simple_repeat 1 21 0 1 826 987 256 42 60 chr13 31605097 31605483 -88678829 + MTEa LTR MaLR 1 379 0 1 826 451 284 76 80 chr13 31606140 31606454 -88677858 - MER44A DNA MER2_type -17 322 10 1 826 245 149 60 0 chr13 31606716 31606783 -88677529 + L1MA9 LINE L1 6182 6252 -60 1 826 270 291 35 11 chr13 31606792 31606879 -88677433 + PB1 SINE Alu 14 102 -25 1 826 675 25 0 0 chr13 31606881 31606962 -88677350 + (TC)n Simple_repeat Simple_repeat 2 82 0 1 826 330 26 0 0 chr13 31606962 31607000 -88677312 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 826 306 323 54 54 chr13 31607224 31607391 -88676921 - L3 LINE CR1 -1063 3426 3260 1 826 413 308 19 0 chr13 31609262 31609366 -88674946 + PB1D10 SINE Alu 4 109 -8 1 826 894 261 59 19 chr13 31609444 31609768 -88674544 + L1MB2 LINE L1 5813 6149 -22 1 826 520 268 0 0 chr13 31609768 31609880 -88674432 + RSINE1 SINE B4 38 149 -16 1 826 204 67 0 0 chr13 31609886 31609916 -88674396 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 826 24 67 0 0 chr13 31610043 31610088 -88674224 + AT_rich Low_complexity Low_complexity 1 45 0 1 826 218 98 57 38 chr13 31610857 31610910 -88673402 + T-rich Low_complexity Low_complexity 1 54 0 1 826 480 241 68 91 chr13 31610932 31611151 -88673161 + Tigger5 DNA MER2_type 2155 2368 -38 1 826 424 233 0 147 chr13 31611188 31611324 -88672988 + PB1D10 SINE Alu 1 116 -1 1 826 261 296 16 16 chr13 31611425 31611552 -88672760 + (CA)n Simple_repeat Simple_repeat 1 127 0 1 826 311 78 0 19 chr13 31611573 31611625 -88672687 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 826 327 254 97 26 chr13 31612839 31612952 -88671360 + B1F1 SINE Alu 6 126 -23 1 826 198 0 0 0 chr13 31613544 31613566 -88670746 + (T)n Simple_repeat Simple_repeat 1 22 0 1 826 229 83 0 59 chr13 31613740 31613791 -88670521 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 826 1412 234 77 29 chr13 31613802 31614177 -88670135 + MTD LTR MaLR 13 405 -14 1 826 604 302 86 61 chr13 31614634 31614836 -88669476 + L1MA4 LINE L1 5664 5871 -429 1 826 2068 154 98 128 chr13 31614836 31615385 -88668927 + MT2A LTR ERVL 1 533 0 1 826 604 302 86 61 chr13 31615385 31615626 -88668686 + L1MA4 LINE L1 5872 6118 -182 1 826 2660 100 13 0 chr13 31615963 31616344 -88667968 + L1_Mus3 LINE L1 6247 6632 -6 1 826 386 85 17 0 chr13 31617067 31617126 -88667186 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 826 183 42 0 0 chr13 31617706 31617730 -88666582 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1 826 3972 222 23 30 chr13 31617730 31618787 -88665525 + Lx7 LINE L1 5532 6596 -1100 1 826 348 179 15 15 chr13 31618778 31618846 -88665466 + Lx7 LINE L1 6895 6962 -734 1 826 1312 240 118 0 chr13 31618855 31619246 -88665066 + Lx7 LINE L1 4013 4449 -1431 1 826 812 277 144 14 chr13 31619257 31619865 -88664447 + Lx7 LINE L1 5099 5797 -1899 1 826 1861 178 66 8 chr13 31620043 31620406 -88663906 - ORR1C2 LTR MaLR 0 384 1 1 826 1671 192 7 0 chr13 31620423 31620704 -88663608 + Lx9 LINE L1 6944 7226 -418 1 826 489 88 0 0 chr13 31621352 31621432 -88662880 + (TG)n Simple_repeat Simple_repeat 2 81 0 1 826 438 339 142 25 chr13 31622704 31623028 -88661284 + MLT1A LTR MaLR 2 363 -11 1 826 310 343 107 40 chr13 31623204 31623429 -88660883 + MLT1J LTR MaLR 170 409 -103 1 826 342 0 0 0 chr13 31626061 31626099 -88658213 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 826 928 214 22 3 chr13 31626120 31626324 -88657988 + B3 SINE B2 3 206 -10 1 826 183 100 0 0 chr13 31626877 31626907 -88657405 + (A)n Simple_repeat Simple_repeat 1 30 0 1 826 1055 303 15 44 chr13 31627218 31627608 -88656704 - MTE2a LTR MaLR 0 379 1 1 826 3210 37 39 0 chr13 31627740 31628121 -88656191 - MTA_Mm LTR MaLR 0 396 1 1 826 3439 28 5 0 chr13 31628611 31629005 -88655307 - MTA_Mm LTR MaLR 0 396 1 1 826 2162 135 3 3 chr13 31630252 31630578 -88653734 + ORR1A3 LTR MaLR 1 326 0 1 826 1082 289 87 32 chr13 31631384 31632086 -88652226 + L1MA4 LINE L1 5114 5918 -382 1 826 310 360 0 0 chr13 31632947 31633058 -88651254 + (TATATG)n Simple_repeat Simple_repeat 4 114 0 1 826 1656 156 94 9 chr13 31633062 31633393 -88650919 + ORR1B2 LTR MaLR 1 359 -8 1 826 3052 62 20 5 chr13 31634179 31634570 -88649742 - L1_Mus2 LINE L1 -1 6565 6169 1 826 841 141 30 0 chr13 31635539 31635719 -88648593 - URR1B DNA MER1_type 0 225 22 1 826 5329 21 0 0 chr13 31635719 31636328 -88647984 + L1Md_T LINE L1 4978 5586 -297 1 826 8666 26 2 0 chr13 31636328 31637321 -88646991 + L1Md_T LINE L1 5587 6581 -1 1 826 235 214 0 0 chr13 31637344 31637386 -88646926 - URR1B DNA MER1_type -183 42 1 1 826 678 177 7 72 chr13 31638068 31638210 -88646102 + B1_Mur4 SINE Alu 9 140 -10 1 826 242 0 61 0 chr13 31638210 31638243 -88646069 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 826 324 288 127 0 chr13 31640171 31640218 -88644094 + L1MC5 LINE L1 6678 6735 -1226 1 826 276 77 0 0 chr13 31640218 31640257 -88644055 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 826 324 288 127 0 chr13 31640257 31640327 -88643985 + L1MC5 LINE L1 6736 6809 -1152 1 826 615 322 76 8 chr13 31640377 31640615 -88643697 - MER2 DNA MER2_type -64 281 28 1 826 595 188 34 0 chr13 31640954 31641071 -88643241 - RSINE1 SINE B4 -41 124 4 1 826 529 210 160 0 chr13 31641686 31641805 -88642507 + B1_Mus2 SINE Alu 2 139 -8 1 826 926 214 83 0 chr13 31641833 31642062 -88642250 + MLT1B LTR MaLR 127 374 -16 1 826 1851 123 141 24 chr13 31642635 31642814 -88641498 - ORR1C2 LTR MaLR -4 380 195 1 826 786 97 0 0 chr13 31642814 31642927 -88641385 + (GA)n Simple_repeat Simple_repeat 2 114 0 1 826 1851 123 141 24 chr13 31642927 31643087 -88641225 - ORR1C2 LTR MaLR -190 194 3 1 826 333 280 112 56 chr13 31643307 31643432 -88640880 + B4 SINE B4 161 292 0 1 826 561 68 0 0 chr13 31643438 31643512 -88640800 + (TG)n Simple_repeat Simple_repeat 2 75 0 1 826 339 239 0 0 chr13 31643680 31643768 -88640544 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 826 509 236 41 87 chr13 31643768 31643940 -88640372 - RSINE1 SINE B4 0 165 2 1 826 971 252 65 14 chr13 31644045 31644335 -88639977 - MER2 DNA MER2_type -11 334 30 1 826 449 240 19 19 chr13 31644408 31644514 -88639798 + PB1D10 SINE Alu 1 106 -11 1 826 369 0 0 0 chr13 31644515 31644556 -88639756 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 2 826 341 214 14 0 chr13 31644556 31644626 -88639686 + ID4_ SINE ID 5 75 -8 2 826 195 114 0 0 chr13 31644754 31644789 -88639523 + (TC)n Simple_repeat Simple_repeat 1 35 0 2 826 1188 54 14 0 chr13 31644840 31645062 -88639250 + (TAGA)n Simple_repeat Simple_repeat 1 225 0 2 826 333 0 0 0 chr13 31645520 31645557 -88638755 + (TTA)n Simple_repeat Simple_repeat 2 38 0 2 826 462 239 80 29 chr13 31645714 31645852 -88638460 - B4 SINE B4 -102 190 46 2 826 22 80 0 0 chr13 31651053 31651103 -88633209 + GC_rich Low_complexity Low_complexity 1 50 0 2 826 24 0 0 0 chr13 31652556 31652580 -88631732 + AT_rich Low_complexity Low_complexity 1 24 0 2 826 21 0 0 0 chr13 31652729 31652750 -88631562 + AT_rich Low_complexity Low_complexity 1 21 0 2 826 21 0 0 0 chr13 31652804 31652825 -88631487 + AT_rich Low_complexity Low_complexity 1 21 0 2 826 1169 68 0 14 chr13 31652912 31653060 -88631252 + B1_Mus1 SINE Alu 2 147 -1 2 826 423 0 0 0 chr13 31654290 31654337 -88629975 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 826 540 0 0 0 chr13 31655192 31655252 -88629060 + (TTTTC)n Simple_repeat Simple_repeat 3 62 0 2 826 984 120 11 17 chr13 31655497 31655675 -88628637 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 2 826 482 140 0 11 chr13 31655675 31655746 -88628566 + polypurine Low_complexity Low_complexity 1 71 0 2 826 1087 69 6 28 chr13 31655746 31655925 -88628387 + (GAAA)n Simple_repeat Simple_repeat 4 178 0 2 826 482 140 0 11 chr13 31655925 31655947 -88628365 + polypurine Low_complexity Low_complexity 72 92 0 2 826 468 0 0 0 chr13 31656765 31656817 -88627495 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 826 369 0 0 0 chr13 31656817 31656857 -88627455 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 826 333 77 43 32 chr13 31658796 31658890 -88625422 + (TTTG)n Simple_repeat Simple_repeat 2 96 0 2 826 3664 82 2 12 chr13 31660818 31661322 -88622990 + L1_Mus4 LINE L1 6137 6635 -1 2 826 243 275 0 55 chr13 31662089 31662162 -88622150 - MER63D DNA AcHobo -681 380 312 2 826 763 225 85 121 chr13 31662882 31663051 -88621261 - L1MA8 LINE L1 -54 6258 6116 2 826 474 276 0 9 chr13 31663051 31663157 -88621155 - PB1D10 SINE Alu -11 106 2 2 826 763 225 85 121 chr13 31663157 31663376 -88620936 - L1MA8 LINE L1 -197 6115 5884 2 826 890 297 41 116 chr13 31663492 31663857 -88620455 - L1MA8 LINE L1 -430 5861 5507 2 826 509 158 53 0 chr13 31663857 31663971 -88620341 - Lx9 LINE L1 -1 7643 7524 2 826 890 274 19 89 chr13 31663971 31664289 -88620023 - L1MA8 LINE L1 -785 5506 5238 2 826 1227 77 17 0 chr13 31664598 31664779 -88619533 + B2_Mm1t SINE B2 6 189 -4 2 826 219 139 0 0 chr13 31665321 31665357 -88618955 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 826 1079 62 21 7 chr13 31666272 31666417 -88617895 + B1_Mm SINE Alu 1 147 0 2 826 486 264 108 8 chr13 31666817 31666947 -88617365 + B1_Mur3 SINE Alu 5 147 -2 2 826 285 29 0 0 chr13 31667783 31667817 -88616495 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 2 826 1088 71 97 0 chr13 31667939 31668094 -88616218 + L1_Mus1 LINE L1 6392 6561 -6 2 826 276 100 0 0 chr13 31668096 31668136 -88616176 + (TA)n Simple_repeat Simple_repeat 1 40 0 2 826 535 108 11 11 chr13 31668287 31668381 -88615931 + (GGA)n Simple_repeat Simple_repeat 1 94 0 2 826 1003 271 57 7 chr13 31668527 31668897 -88615415 + L1M5 LINE L1 5365 5749 -491 2 826 186 133 0 0 chr13 31669350 31669380 -88614932 + (GGGA)n Simple_repeat Simple_repeat 4 33 0 2 826 336 24 0 0 chr13 31669811 31669852 -88614460 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 826 23 0 0 0 chr13 31670005 31670028 -88614284 + AT_rich Low_complexity Low_complexity 1 23 0 2 826 254 275 37 24 chr13 31670037 31670119 -88614193 + ID2 SINE ID 1 83 0 2 826 24 0 0 0 chr13 31670119 31670143 -88614169 + AT_rich Low_complexity Low_complexity 1 24 0 2 826 1086 296 105 60 chr13 31671026 31671655 -88612657 + Lx8 LINE L1 6805 7461 -12 2 826 180 111 0 0 chr13 31672601 31672628 -88611684 + (ATGGTG)n Simple_repeat Simple_repeat 5 31 0 2 826 277 342 150 26 chr13 31672668 31672826 -88611486 + L2a LINE L2 3161 3347 -79 2 826 180 0 0 0 chr13 31672826 31672846 -88611466 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2 826 277 342 150 26 chr13 31672846 31672921 -88611391 + L2a LINE L2 3348 3422 -4 2 826 518 312 69 47 chr13 31672927 31673203 -88611109 + L3 LINE CR1 3573 3854 -635 2 826 374 270 101 43 chr13 31673818 31674027 -88610285 + Lx7 LINE L1 7206 7426 -270 2 826 236 312 16 23 chr13 31674097 31674225 -88610087 - L1MB4 LINE L1 -5 6175 6049 2 826 986 290 65 0 chr13 31674594 31674915 -88609397 + L1MA8 LINE L1 5561 5902 -389 2 826 183 80 0 0 chr13 31675089 31675114 -88609198 + (A)n Simple_repeat Simple_repeat 1 25 0 2 826 334 101 138 12 chr13 31675287 31675367 -88608945 + L1MB2 LINE L1 6082 6171 0 2 826 892 284 144 49 chr13 31675456 31675802 -88608510 + MTEb LTR MaLR 1 379 0 2 826 971 284 23 11 chr13 31675802 31676062 -88608250 + MTEb-int LTR MaLR 1 263 -1317 2 826 749 280 65 23 chr13 31676277 31676540 -88607772 + MER2 DNA MER2_type 71 344 -1 2 826 712 80 18 9 chr13 31676554 31676667 -88607645 + (CATATA)n Simple_repeat Simple_repeat 2 115 0 2 826 369 0 0 0 chr13 31677016 31677057 -88607255 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 826 1098 230 191 56 chr13 31677338 31677862 -88606450 - Lx7 LINE L1 0 7696 7102 2 826 622 128 23 31 chr13 31678362 31678491 -88605821 + BC1_Mm scRNA scRNA 1 128 -24 2 826 248 296 0 0 chr13 31678591 31678706 -88605606 + (TCTA)n Simple_repeat Simple_repeat 4 118 0 2 826 602 288 13 27 chr13 31678769 31678919 -88605393 + RSINE1 SINE B4 18 165 0 2 826 228 100 0 0 chr13 31678955 31678995 -88605317 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 826 434 238 38 0 chr13 31679023 31679128 -88605184 + PB1D10 SINE Alu 3 111 -6 2 826 256 291 62 107 chr13 31679128 31679200 -88605112 + B4A SINE B4 88 256 -36 2 826 594 293 171 3 chr13 31679310 31679632 -88604680 + L1MB7 LINE L1 405 780 -6124 2 826 245 252 181 9 chr13 31680101 31680217 -88604095 + L1MB7 LINE L1 2985 3120 -4214 2 826 591 249 154 0 chr13 31680246 31680415 -88603897 + B3 SINE B2 3 197 -19 2 826 775 181 0 51 chr13 31680688 31680845 -88603467 + B2_Mm2 SINE B2 23 171 -24 2 826 1782 274 61 60 chr13 31680855 31681624 -88602688 + L1MB7 LINE L1 6242 7011 -33 2 826 931 162 0 20 chr13 31681787 31681938 -88602374 + B1_Mur2 SINE Alu 1 148 -1 2 826 3483 314 78 103 chr13 31682760 31684938 -88599374 - Charlie1 DNA MER1_type -52 2729 663 2 826 586 288 91 0 chr13 31684938 31685136 -88599176 - B3 SINE B2 0 216 1 2 826 3483 314 78 103 chr13 31685136 31685540 -88598772 - Charlie1 DNA MER1_type -2119 662 210 2 826 1258 132 5 0 chr13 31685544 31685757 -88598555 + L1_Mur2 LINE L1 5183 5396 -481 2 826 2761 31 2 213 chr13 31685758 31686252 -88598060 + RLTR10 LTR ERVK 1 390 0 2 826 4201 48 7 12 chr13 31686262 31687143 -88597169 + RLTR10-int LTR ERVK 41 998 -989 2 826 360 266 39 15 chr13 31687207 31687337 -88596975 + RLTR10-int LTR ERVK 1462 1594 -5987 2 826 8922 19 0 7 chr13 31687420 31688420 -88595892 + RLTR10-int LTR ERVK 992 1984 -3 2 826 2761 31 2 213 chr13 31688422 31688916 -88595396 + RLTR10 LTR ERVK 1 390 0 2 826 2438 23 136 0 chr13 31688916 31689217 -88595095 - IAPEz-int LTR ERVK -6132 349 8 2 826 3047 18 0 0 chr13 31689217 31689554 -88594758 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 826 7497 150 81 7 chr13 31689554 31691058 -88593254 + Lx5 LINE L1 5392 7037 -13 2 826 382 348 213 0 chr13 31691085 31691249 -88593063 - Charlie1 DNA MER1_type -2581 200 2 2 826 649 262 173 8 chr13 31692253 31692507 -88591805 - MLT1B LTR MaLR -93 297 2 2 826 243 79 0 0 chr13 31694290 31694328 -88589984 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 826 23 68 0 0 chr13 31695091 31695135 -88589177 + AT_rich Low_complexity Low_complexity 1 44 0 2 826 263 258 16 0 chr13 31695342 31695404 -88588908 + CT-rich Low_complexity Low_complexity 1 63 0 2 826 1065 102 0 0 chr13 31696346 31696503 -88587809 + (GGAA)n Simple_repeat Simple_repeat 4 160 0 2 826 718 232 35 0 chr13 31696633 31696775 -88587537 - RSINE1 SINE B4 -15 150 4 2 826 402 21 0 0 chr13 31697069 31697116 -88587196 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 826 289 329 61 39 chr13 31697205 31697436 -88586876 + L1M5 LINE L1 3927 4162 -1984 2 826 375 272 5 11 chr13 31697647 31697743 -88586569 + PB1D10 SINE Alu 2 101 -48 2 826 22 0 0 0 chr13 31698525 31698547 -88585765 + AT_rich Low_complexity Low_complexity 1 22 0 2 826 611 198 45 0 chr13 31698892 31699003 -88585309 + B3A SINE B2 2 117 -81 2 826 359 255 43 0 chr13 31699711 31699805 -88584507 + MLT1N2 LTR MaLR 79 176 -386 2 826 1275 147 9 22 chr13 31700061 31700284 -88584028 - URR1A DNA MER1_type -2 224 5 2 826 367 208 368 23 chr13 31700472 31700605 -88583707 + B3 SINE B2 37 215 -1 2 826 2482 143 99 5 chr13 31700615 31701057 -88583255 - Lx4B LINE L1 -294 6764 6281 2 826 25 75 0 0 chr13 31701114 31701167 -88583145 + AT_rich Low_complexity Low_complexity 1 53 0 2 826 599 269 67 0 chr13 31701426 31701560 -88582752 - B1_Mur1 SINE Alu -5 144 2 2 826 281 26 26 0 chr13 31702444 31702482 -88581830 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 826 531 288 176 0 chr13 31702857 31703090 -88581222 + MER2 DNA MER2_type 9 282 -63 2 826 352 324 43 0 chr13 31703093 31703232 -88581080 - L1MA6 LINE L1 -22 6278 6134 2 826 621 156 81 16 chr13 31703240 31703364 -88580948 + B1_Mur4 SINE Alu 9 140 -10 2 826 1121 71 0 6 chr13 31703367 31703524 -88580788 + (GAAA)n Simple_repeat Simple_repeat 3 158 0 2 826 504 196 0 0 chr13 31703524 31703574 -88580738 + polypurine Low_complexity Low_complexity 1 50 0 2 826 1208 91 6 0 chr13 31703574 31703750 -88580562 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 2 826 504 196 0 0 chr13 31703750 31703806 -88580506 + polypurine Low_complexity Low_complexity 51 106 0 2 826 677 269 50 5 chr13 31703815 31704017 -88580295 - L1MA6 LINE L1 -142 6158 5948 2 826 393 310 6 45 chr13 31704037 31704213 -88580099 - L1MA6 LINE L1 -521 5779 5611 2 826 621 0 0 0 chr13 31704228 31704297 -88580015 + (TTTTG)n Simple_repeat Simple_repeat 3 71 0 2 826 924 86 31 8 chr13 31704299 31704428 -88579884 - B1_Mus1 SINE Alu -12 136 5 2 826 423 295 13 20 chr13 31704507 31704659 -88579653 - L1MA6 LINE L1 -895 5248 5098 2 826 414 0 0 0 chr13 31705881 31705927 -88578385 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 2 826 292 190 0 49 chr13 31705935 31705996 -88578316 - RLTR25A LTR ERVK -524 579 522 2 826 723 71 10 0 chr13 31705942 31706040 -88578272 - B1_Mus1 SINE Alu -48 100 2 3 826 227 133 0 22 chr13 31706482 31706528 -88577784 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 3 826 362 121 0 15 chr13 31708914 31708981 -88575331 + (CATA)n Simple_repeat Simple_repeat 1 66 0 3 826 405 0 0 0 chr13 31708982 31709027 -88575285 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 826 905 90 0 8 chr13 31709624 31709758 -88574554 + (TTTCC)n Simple_repeat Simple_repeat 1 133 0 3 826 214 182 23 0 chr13 31712666 31712710 -88571602 + GA-rich Low_complexity Low_complexity 3 47 0 3 826 258 219 0 0 chr13 31714120 31714184 -88570128 + T-rich Low_complexity Low_complexity 1 64 0 3 826 195 129 0 0 chr13 31715699 31715730 -88568582 + (T)n Simple_repeat Simple_repeat 1 31 0 3 826 441 0 0 0 chr13 31716911 31716960 -88567352 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 826 219 36 0 0 chr13 31717497 31717525 -88566787 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 3 826 180 0 0 0 chr13 31717751 31717771 -88566541 + (CCG)n Simple_repeat Simple_repeat 2 21 0 3 826 28 91 0 0 chr13 31717959 31718036 -88566276 + GC_rich Low_complexity Low_complexity 1 77 0 3 827 360 0 0 0 chr13 31719709 31719749 -88564563 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 827 369 0 0 0 chr13 31720143 31720184 -88564128 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 827 201 175 25 0 chr13 31722537 31722577 -88561735 + CT-rich Low_complexity Low_complexity 1 41 0 3 827 333 0 0 0 chr13 31722859 31722896 -88561416 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 827 23 0 0 0 chr13 31723543 31723566 -88560746 + AT_rich Low_complexity Low_complexity 1 23 0 3 827 378 0 0 0 chr13 31723806 31723848 -88560464 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 827 389 302 148 0 chr13 31725896 31726058 -88558254 - MER5A DNA MER1_type 0 189 4 3 827 369 0 0 0 chr13 31726149 31726190 -88558122 + (TTA)n Simple_repeat Simple_repeat 2 42 0 3 827 2396 109 106 8 chr13 31726194 31726573 -88557739 - Lx4A LINE L1 -8 7050 6635 3 827 271 237 21 0 chr13 31727096 31727189 -88557123 + GA-rich Low_complexity Low_complexity 4 98 0 3 827 728 167 6 0 chr13 31727280 31727448 -88556864 + G-rich Low_complexity Low_complexity 4 172 0 3 827 332 267 132 9 chr13 31727838 31727944 -88556368 + L1MCa LINE L1 1845 1963 -4545 3 827 369 245 0 0 chr13 31727944 31728046 -88556266 + (TATATG)n Simple_repeat Simple_repeat 3 104 0 3 827 1158 122 0 0 chr13 31728046 31728226 -88556086 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 827 392 247 0 0 chr13 31729546 31729619 -88554693 - B3A SINE B2 -117 81 9 3 827 483 321 6 0 chr13 31729839 31730004 -88554308 + (CA)n Simple_repeat Simple_repeat 2 167 0 3 827 258 355 13 0 chr13 31730023 31730178 -88554134 + (CATA)n Simple_repeat Simple_repeat 1 157 0 3 827 236 330 0 0 chr13 31730263 31730366 -88553946 + (CA)n Simple_repeat Simple_repeat 1 103 0 3 827 496 329 6 24 chr13 31730564 31730732 -88553580 - MLT1B LTR MaLR -157 233 69 3 827 783 247 19 0 chr13 31730900 31731062 -88553250 + B3A SINE B2 1 165 -33 3 827 345 93 0 0 chr13 31731067 31731121 -88553191 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 827 538 243 162 0 chr13 31731353 31731501 -88552811 - MLT2B3 LTR ERVL -380 174 3 3 827 1741 201 163 15 chr13 31732242 31732702 -88551610 - RLTR12B LTR ERVK 0 528 1 3 827 2139 166 57 12 chr13 31732974 31733377 -88550935 + MTC LTR MaLR 1 421 0 3 827 459 0 0 0 chr13 31734951 31735002 -88549310 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 827 193 388 29 10 chr13 31735404 31735508 -88548804 + L4 LINE RTE 1266 1371 -658 3 827 457 222 20 10 chr13 31735516 31735616 -88548696 - PB1 SINE Alu 0 127 27 3 827 859 249 43 114 chr13 31736254 31736535 -88547777 - B4A SINE B4 -17 275 15 3 827 324 0 0 0 chr13 31736658 31736694 -88547618 + (TC)n Simple_repeat Simple_repeat 2 37 0 3 827 417 39 0 0 chr13 31736694 31736744 -88547568 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 827 264 324 73 18 chr13 31736788 31736898 -88547414 - Tigger5 DNA MER2_type 0 2406 2291 3 827 310 337 212 10 chr13 31736897 31737095 -88547217 - Tigger5 DNA MER2_type -2167 239 2 3 827 1900 228 118 16 chr13 31737265 31737774 -88546538 - RMER15 LTR ERVL 0 575 15 3 827 729 274 22 78 chr13 31738811 31739041 -88545271 + B4 SINE B4 2 218 -74 3 827 432 0 0 0 chr13 31739057 31739105 -88545207 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 827 805 93 0 0 chr13 31739352 31739460 -88544852 + B1_Mus1 SINE Alu 12 119 -29 3 827 284 320 0 57 chr13 31739387 31739493 -88544819 + RLTR25A LTR ERVK 522 621 -482 3 827 246 305 0 48 chr13 31739466 31739528 -88544784 - RMER21A LTR ERV1 -124 718 660 3 827 695 230 47 47 chr13 31739615 31739807 -88544505 - RMER21A LTR ERV1 -364 583 392 3 827 1370 285 65 57 chr13 31739982 31740458 -88543854 + MER44B DNA MER2_type 10 489 -61 3 827 316 224 212 0 chr13 31741365 31741450 -88542862 - Charlie8 DNA MER1_type -2295 133 31 3 827 402 280 40 10 chr13 31742045 31742179 -88542133 - PB1D10 SINE Alu -11 138 1 3 827 21 0 0 0 chr13 31742375 31742396 -88541916 + GC_rich Low_complexity Low_complexity 1 21 0 3 827 224 354 11 58 chr13 31743404 31743491 -88540821 + ID4_ SINE ID 1 83 0 3 827 222 118 0 0 chr13 31743564 31743598 -88540714 + (GGGGA)n Simple_repeat Simple_repeat 3 36 0 3 827 1903 184 60 50 chr13 31745683 31745819 -88538493 - Lx5 LINE L1 0 7050 6898 3 827 414 0 0 0 chr13 31745819 31745865 -88538447 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 827 1903 187 58 48 chr13 31745865 31746159 -88538153 - Lx5 LINE L1 -153 6897 6630 3 827 287 269 15 0 chr13 31746280 31746347 -88537965 - MER58A DNA MER1_type -104 120 53 3 827 240 308 50 25 chr13 31746410 31746530 -88537782 - LTR82A LTR ERVL -749 123 1 3 827 309 264 46 76 chr13 31746584 31746715 -88537597 + MLT1A1 LTR MaLR 1 127 -281 3 827 675 287 35 48 chr13 31747050 31747277 -88537035 + ID_B1 SINE B4 1 224 0 3 827 371 219 43 87 chr13 31748479 31748594 -88535718 - PB1D7 SINE Alu -9 111 2 3 827 1000 187 11 16 chr13 31748600 31748785 -88535527 + B3 SINE B2 32 215 -1 3 827 233 306 46 23 chr13 31748801 31748888 -88535424 + MIRc SINE MIR 34 122 -146 3 827 1069 114 149 10 chr13 31749315 31749510 -88534802 - URR1A DNA MER1_type 0 226 5 3 827 536 279 161 32 chr13 31750121 31750604 -88533708 + L1MB3 LINE L1 5524 6065 -103 3 827 233 167 0 94 chr13 31753946 31753999 -88530313 - MT2A LTR ERVL 0 533 486 3 827 241 235 0 93 chr13 31753989 31754011 -88530301 + MT2A LTR ERVL 500 521 -46 3 827 477 90 0 0 chr13 31754011 31754078 -88530234 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 827 270 126 0 27 chr13 31754078 31754130 -88530182 + MT2A LTR ERVL 497 567 0 3 827 1876 181 167 16 chr13 31754173 31754599 -88529713 - MT2A LTR ERVL -40 493 4 3 827 1799 149 70 3 chr13 31754604 31754934 -88529378 - MERVL_2A-int LTR ERVL -2 5759 5408 3 827 287 286 10 42 chr13 31755885 31756033 -88528279 + MER57-int LTR ERV1 7155 7263 -274 3 827 43 20 0 0 chr13 31756367 31756417 -88527895 + AT_rich Low_complexity Low_complexity 1 50 0 3 827 350 247 0 0 chr13 31756447 31756524 -88527788 - ID4 SINE ID -2 81 5 3 827 606 160 3 23 chr13 31756546 31756666 -88527646 + MTD LTR MaLR 262 419 0 3 827 258 254 16 0 chr13 31756858 31756921 -88527391 + GA-rich Low_complexity Low_complexity 1 64 0 3 827 235 211 82 27 chr13 31756947 31757020 -88527292 - ORR1C2 LTR MaLR -303 81 5 3 827 254 331 88 19 chr13 31757106 31757203 -88527109 - L1M5 LINE L1 -398 5786 5676 3 827 192 77 0 0 chr13 31757203 31757229 -88527083 + (TTA)n Simple_repeat Simple_repeat 1 26 0 3 827 254 331 88 19 chr13 31757229 31757291 -88527021 - L1M5 LINE L1 -509 5675 5617 3 827 286 229 0 14 chr13 31757413 31757484 -88526828 - L1M5 LINE L1 -758 5426 5357 3 827 333 258 60 90 chr13 31757588 31757754 -88526558 - L1M5 LINE L1 -1314 4832 4672 3 827 291 321 96 37 chr13 31759374 31759510 -88524802 - MLT1J LTR MaLR -358 154 11 3 827 392 294 45 9 chr13 31759730 31759840 -88524472 - MLT1I LTR MaLR -212 199 86 3 827 252 0 0 0 chr13 31760337 31760365 -88523947 + (T)n Simple_repeat Simple_repeat 1 28 0 3 827 388 336 80 50 chr13 31760657 31760895 -88523417 - MLT1J1 LTR MaLR -15 429 185 3 827 270 81 0 0 chr13 31761067 31761104 -88523208 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 827 473 249 81 60 chr13 31761104 31761339 -88522973 - MLT1B LTR MaLR -136 254 15 3 827 233 224 20 0 chr13 31761393 31761442 -88522870 - MLT1J1 LTR MaLR -351 161 112 3 827 1537 242 60 18 chr13 31761650 31762050 -88522262 + MTD LTR MaLR 1 417 -2 3 827 2780 165 65 17 chr13 31762337 31762862 -88521450 + RLTR20A1 LTR ERVK 2 551 0 3 827 198 0 0 0 chr13 31763178 31763200 -88521112 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 827 4393 50 41 7 chr13 31763210 31763752 -88520560 + LTRIS2 LTR ERV1 5 564 0 3 827 351 297 103 52 chr13 31764566 31764740 -88519572 + RMER13A LTR ERVK 33 215 -645 3 827 459 265 22 25 chr13 31764712 31764892 -88519420 + RLTR20C LTR ERVK 205 485 -49 3 827 312 322 0 0 chr13 31765122 31765209 -88519103 + GA-rich Low_complexity Low_complexity 2 88 0 3 827 3209 258 75 43 chr13 31765226 31765889 -88518423 + L1_Mur3 LINE L1 3541 4214 -1666 3 827 324 48 0 0 chr13 31765889 31765931 -88518381 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 827 3209 258 75 43 chr13 31765931 31766512 -88517800 + L1_Mur3 LINE L1 4215 4825 -1055 3 827 236 269 0 0 chr13 31766512 31766564 -88517748 + MTC-int LTR MaLR 1203 1254 -4 3 827 1316 282 36 22 chr13 31766600 31766956 -88517356 + MTD LTR MaLR 42 402 -17 3 827 548 276 11 46 chr13 31767007 31767182 -88517130 - B3 SINE B2 -10 206 38 3 827 787 210 408 22 chr13 31767196 31767561 -88516751 - RMER13B LTR ERVK -4 904 399 3 827 673 216 0 28 chr13 31768198 31768341 -88515971 + B1_Mur3 SINE Alu 5 143 -6 3 827 407 292 14 28 chr13 31769042 31769183 -88515129 - HAL1-2a_MD LINE L1 -541 2483 2345 3 827 460 241 233 0 chr13 31769316 31769432 -88514880 + B1_Mur2 SINE Alu 2 144 -5 3 827 300 111 0 0 chr13 31770331 31770376 -88513936 + (GGA)n Simple_repeat Simple_repeat 2 46 0 3 827 393 247 59 40 chr13 31770535 31770636 -88513676 + PB1D10 SINE Alu 10 112 -5 3 827 236 191 44 0 chr13 31771582 31771650 -88512662 + (TA)n Simple_repeat Simple_repeat 2 72 0 4 827 273 355 12 0 chr13 31772069 31772235 -88512077 - L1M2 LINE L1 -925 5218 5051 4 827 304 275 150 55 chr13 31772330 31772457 -88511855 + ID_B1 SINE B4 81 219 -5 4 827 461 263 72 40 chr13 31772337 31772471 -88511841 + B1F SINE Alu 7 147 0 4 827 232 250 56 28 chr13 31772474 31772581 -88511731 + L1M4 LINE L1 5140 5249 -897 4 827 364 199 113 33 chr13 31772589 31772740 -88511572 + RLTR12B LTR ERVK 172 334 -194 4 827 1147 192 54 15 chr13 31772739 31772998 -88511314 + RLTR12B LTR ERVK 241 509 -19 4 827 554 278 125 7 chr13 31773589 31773741 -88510571 + B3A SINE B2 2 171 -27 4 827 480 35 0 0 chr13 31773745 31773803 -88510509 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 827 229 273 0 18 chr13 31773853 31773909 -88510403 + (ATGGTG)n Simple_repeat Simple_repeat 2 56 0 4 827 662 219 99 28 chr13 31774815 31775026 -88509286 + L1MC1 LINE L1 5910 6135 -198 4 827 242 312 0 94 chr13 31775032 31775138 -88509174 + ORR1E LTR MaLR 31 126 -253 4 827 1355 109 5 0 chr13 31775808 31776001 -88508311 + B2_Mm2 SINE B2 1 194 -1 4 827 851 286 56 24 chr13 31776632 31777005 -88507307 + L1MB3 LINE L1 5464 5848 -335 4 827 363 96 0 0 chr13 31777137 31777189 -88507123 + (ATG)n Simple_repeat Simple_repeat 3 54 0 4 827 296 272 50 137 chr13 31777195 31777472 -88506840 + ORR1E LTR MaLR 102 354 -5 4 827 583 244 170 20 chr13 31777479 31777726 -88506586 + L1MB3 LINE L1 5844 6127 -56 4 827 558 0 0 0 chr13 31777745 31777807 -88506505 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 827 315 0 0 0 chr13 31778107 31778142 -88506170 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 4 827 1016 262 10 48 chr13 31778295 31778588 -88505724 - B4A SINE B4 0 292 11 4 827 283 293 10 20 chr13 31778728 31778829 -88505483 + L1MB1 LINE L1 5928 6027 -141 4 827 305 232 179 0 chr13 31778830 31778942 -88505370 - MLT1B LTR MaLR -78 312 181 4 827 507 159 40 0 chr13 31778942 31779093 -88505219 + (TG)n Simple_repeat Simple_repeat 1 157 0 4 827 216 153 49 35 chr13 31779110 31779252 -88505060 + (TG)n Simple_repeat Simple_repeat 1 144 0 4 827 487 238 47 42 chr13 31779252 31779445 -88504867 - MLT1B LTR MaLR -196 194 1 4 827 566 281 85 13 chr13 31780961 31781185 -88503127 - MER2 DNA MER2_type -104 241 2 4 827 414 241 26 9 chr13 31781582 31781695 -88502617 - MLT1A1 LTR MaLR 0 408 294 4 827 214 313 130 0 chr13 31781979 31782094 -88502218 + L2b LINE L2 3246 3375 0 4 827 2781 12 0 0 chr13 31782117 31782455 -88501857 - ORR1A0 LTR MaLR -8 338 1 4 827 1711 205 32 22 chr13 31782658 31783027 -88501285 + ORR1D1 LTR MaLR 1 373 -1 4 827 612 27 0 0 chr13 31783473 31783547 -88500765 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 4 827 932 203 45 19 chr13 31783896 31784109 -88500203 - B3 SINE B2 -6 210 14 4 827 702 35 0 0 chr13 31784146 31784231 -88500081 + (TC)n Simple_repeat Simple_repeat 2 86 0 4 827 2312 159 63 0 chr13 31784231 31784614 -88499698 - Lx7 LINE L1 -735 6961 6555 4 827 487 191 0 11 chr13 31784686 31784776 -88499536 - B1_Mus1 SINE Alu -58 90 2 4 827 294 200 43 96 chr13 31784692 31784786 -88499526 - MT2B LTR ERVL -361 240 152 4 827 183 261 0 0 chr13 31785087 31785156 -88499156 + (CA)n Simple_repeat Simple_repeat 1 69 0 4 827 258 325 0 24 chr13 31785163 31785286 -88499026 + (CATA)n Simple_repeat Simple_repeat 1 120 0 4 827 367 275 14 4 chr13 31785286 31785573 -88498739 + (CA)n Simple_repeat Simple_repeat 1 290 0 4 827 431 240 174 33 chr13 31785692 31785919 -88498393 + Lx9 LINE L1 3065 3310 -2567 4 827 6586 93 0 0 chr13 31785938 31786811 -88497501 - L1_Mus1 LINE L1 0 5883 5011 4 827 5818 43 3 0 chr13 31786811 31787506 -88496806 + L1_Mus1 LINE L1 5870 6566 -1 4 827 255 204 34 30 chr13 31787693 31787787 -88496525 + Lx9 LINE L1 4614 4733 -1147 4 827 519 286 47 35 chr13 31787881 31788113 -88496199 + L1_Rod LINE L1 4933 5167 -680 4 827 288 293 369 13 chr13 31788146 31788444 -88495868 + RMER5 LTR ERV1 40 443 -91 4 827 1911 321 59 65 chr13 31788825 31789500 -88494812 + Lx9 LINE L1 5587 6209 -1264 4 827 824 87 27 0 chr13 31789500 31789649 -88494663 + (TG)n Simple_repeat Simple_repeat 2 154 0 4 827 2213 275 32 20 chr13 31789649 31790287 -88494025 + Lx9 LINE L1 6210 6996 -648 4 827 546 16 0 0 chr13 31790287 31790350 -88493962 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 827 305 293 135 57 chr13 31790513 31790705 -88493607 + MER2 DNA MER2_type 130 336 -9 4 827 284 62 0 59 chr13 31791211 31791279 -88493033 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 4 827 288 0 0 0 chr13 31791376 31791408 -88492904 + (T)n Simple_repeat Simple_repeat 1 32 0 4 827 774 270 161 41 chr13 31791772 31792378 -88491934 + MTE-int LTR MaLR 723 1577 -3 4 827 1129 249 18 52 chr13 31792401 31792727 -88491585 + MTE2a LTR MaLR 57 371 -8 4 827 361 287 47 34 chr13 31792747 31792895 -88491417 + L1MC4a LINE L1 7724 7873 -9 4 827 739 243 103 22 chr13 31792900 31793085 -88491227 + B3 SINE B2 3 202 -14 4 827 6922 23 0 0 chr13 31793178 31793962 -88490350 + L1Md_A LINE L1 4803 5586 -297 4 827 8730 26 1 0 chr13 31793962 31794957 -88489355 + L1Md_A LINE L1 5587 6582 0 4 827 239 0 0 31 chr13 31795322 31795354 -88488958 + (TTG)n Simple_repeat Simple_repeat 3 33 0 4 827 522 0 0 0 chr13 31795355 31795413 -88488899 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 827 2034 186 43 31 chr13 31795500 31795987 -88488325 - RLTR16 LTR ERVK -12 493 1 4 827 279 0 0 0 chr13 31795989 31796020 -88488292 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 827 653 305 195 25 chr13 31798032 31798601 -88485711 + L2a LINE L2 2674 3344 -82 4 827 297 0 0 0 chr13 31798601 31798634 -88485678 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 4 827 265 301 90 13 chr13 31798634 31798664 -88485648 + L2a LINE L2 3345 3374 -52 4 827 441 0 0 0 chr13 31798666 31798715 -88485597 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 827 220 306 0 0 chr13 31798917 31798966 -88485346 - ID4_ SINE ID 0 83 35 4 827 214 203 167 17 chr13 31800496 31800556 -88483756 + L2a LINE L2 3323 3391 -35 4 827 435 240 30 0 chr13 31800911 31801011 -88483301 + B3A SINE B2 46 148 -50 4 827 467 33 16 0 chr13 31801011 31801072 -88483240 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 827 369 0 0 0 chr13 31801072 31801112 -88483200 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 827 288 130 0 0 chr13 31801112 31801158 -88483154 + (TGAA)n Simple_repeat Simple_repeat 4 49 0 4 827 985 198 0 0 chr13 31801159 31801336 -88482976 + B3 SINE B2 40 216 0 4 827 208 139 0 0 chr13 31801877 31801913 -88482399 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 827 513 0 0 0 chr13 31802987 31803044 -88481268 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 827 651 263 14 8 chr13 31803119 31803287 -88481025 + B3A SINE B2 36 203 -13 4 827 213 200 0 0 chr13 31803287 31803332 -88480980 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 827 24 0 0 0 chr13 31803333 31803357 -88480955 + AT_rich Low_complexity Low_complexity 1 24 0 4 827 285 304 54 0 chr13 31804085 31804197 -88480115 + MER94 DNA AcHobo 14 131 -3 4 827 419 302 0 30 chr13 31804783 31804916 -88479396 + ID_B1 SINE B4 94 222 -2 4 827 405 0 0 0 chr13 31804984 31805029 -88479283 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 827 605 250 82 68 chr13 31805442 31805661 -88478651 - MLT1A0 LTR MaLR -15 350 129 4 827 248 187 11 157 chr13 31805674 31805686 -88478626 - ORR1D2 LTR MaLR 0 421 411 4 827 1953 131 24 52 chr13 31805686 31806106 -88478206 - RMER17C LTR ERVK 0 410 3 4 827 1064 213 123 67 chr13 31806106 31806433 -88477879 - ORR1D2 LTR MaLR -11 410 1 4 827 296 268 164 29 chr13 31806547 31806719 -88477593 + L1MB3 LINE L1 5959 6162 -21 4 827 486 205 30 76 chr13 31807256 31807388 -88476924 + B1F SINE Alu 24 149 0 4 827 564 56 0 0 chr13 31808009 31808081 -88476231 + (GGAA)n Simple_repeat Simple_repeat 2 73 0 4 827 633 27 0 0 chr13 31808083 31808158 -88476154 + (GGGAA)n Simple_repeat Simple_repeat 5 79 0 4 827 375 162 0 0 chr13 31808173 31808253 -88476059 + GA-rich Low_complexity Low_complexity 3 82 0 4 827 450 0 0 0 chr13 31808472 31808522 -88475790 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 827 520 289 79 23 chr13 31809252 31809468 -88474844 - MER2 DNA MER2_type -1 344 117 4 827 1488 249 70 30 chr13 31809511 31809912 -88474400 + MTD LTR MaLR 3 419 0 4 827 1969 276 71 75 chr13 31809929 31811003 -88473309 + MTD-int LTR MaLR 17 1086 -12 4 827 1224 216 35 38 chr13 31811013 31811351 -88472961 + MTD LTR MaLR 1 327 -69 4 827 3929 146 77 14 chr13 31813102 31813813 -88470499 - RMER6A LTR ERVK 0 756 1 4 827 258 242 0 16 chr13 31813846 31813909 -88470403 + GA-rich Low_complexity Low_complexity 1 62 0 4 827 338 301 168 23 chr13 31813918 31814180 -88470132 + ORR1E LTR MaLR 19 318 -41 4 827 2217 291 60 51 chr13 31814204 31815139 -88469173 + MTE-int LTR MaLR 1 943 -637 4 827 27 29 0 0 chr13 31815750 31815784 -88468528 + AT_rich Low_complexity Low_complexity 1 34 0 4 827 277 276 64 16 chr13 31816450 31816575 -88467737 - MER58B DNA MER1_type -139 202 72 4 827 4641 201 46 7 chr13 31816589 31817461 -88466851 - Lx5 LINE L1 -1 7049 6144 4 827 331 259 0 12 chr13 31817707 31817793 -88466519 - MTEb LTR MaLR -14 365 281 4 827 693 56 9 18 chr13 31818200 31818309 -88466003 + (TG)n Simple_repeat Simple_repeat 2 109 0 4 827 929 188 0 0 chr13 31818552 31818701 -88465611 + B1_Mur4 SINE Alu 1 149 -1 4 827 207 162 0 0 chr13 31818718 31818755 -88465557 + GA-rich Low_complexity Low_complexity 3 39 0 4 827 282 29 0 0 chr13 31818781 31818816 -88465496 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 827 555 16 0 0 chr13 31818816 31818879 -88465433 + (GA)n Simple_repeat Simple_repeat 2 65 0 4 827 246 213 16 0 chr13 31819152 31819213 -88465099 + MER46C DNA MER2_type 276 337 -1 4 827 277 374 27 0 chr13 31819622 31819769 -88464543 + Tigger5 DNA MER2_type 86 236 -2170 4 827 382 285 118 35 chr13 31819874 31820103 -88464209 + L1MC5 LINE L1 7666 7913 -48 4 827 331 300 0 0 chr13 31820111 31820201 -88464111 - L1MA5 LINE L1 -36 6264 6175 4 827 268 186 129 0 chr13 31820206 31820276 -88464036 - L1MA5 LINE L1 -7 6293 6215 5 827 355 320 109 10 chr13 31820357 31820559 -88463753 - L1MA5 LINE L1 -206 6094 5873 4 827 419 305 0 0 chr13 31820769 31820864 -88463448 - PB1D10 SINE Alu -9 108 14 5 827 637 230 43 0 chr13 31821239 31821369 -88462943 + RSINE1 SINE B4 13 148 -17 5 827 378 0 0 0 chr13 31821369 31821411 -88462901 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 827 311 271 29 0 chr13 31822354 31822424 -88461888 - ID4_ SINE ID -10 73 2 5 827 321 269 164 9 chr13 31822441 31822557 -88461755 - B1F1 SINE Alu -9 140 7 5 827 602 38 25 0 chr13 31823179 31823259 -88461053 + (TAGA)n Simple_repeat Simple_repeat 2 83 0 5 827 444 191 0 0 chr13 31824839 31824928 -88459384 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 5 827 347 100 0 0 chr13 31824935 31824985 -88459327 - HAL1-3A_ME LINE L1 -840 2018 1969 5 827 717 137 0 0 chr13 31827135 31827266 -88457046 + (TG)n Simple_repeat Simple_repeat 2 132 0 5 827 614 278 17 28 chr13 31827313 31827494 -88456818 - B4A SINE B4 -113 179 1 5 827 597 28 0 0 chr13 31827615 31827686 -88456626 + (GA)n Simple_repeat Simple_repeat 1 71 0 5 827 4960 62 8 3 chr13 31828871 31829501 -88454811 - L1_Mus2 LINE L1 0 6566 5934 5 827 823 75 0 9 chr13 31829501 31829608 -88454704 - U6 snRNA snRNA 0 107 2 5 827 196 53 53 0 chr13 31830098 31830136 -88454176 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 5 827 3615 26 28 9 chr13 31830151 31830579 -88453733 + RLTR10C LTR ERVK 1 436 0 5 827 873 232 114 19 chr13 31830682 31830946 -88453366 - MTE2a LTR MaLR -2 377 89 5 827 1592 243 123 18 chr13 31831010 31831196 -88453116 - MTD-int LTR MaLR 0 1580 1367 5 827 315 0 0 0 chr13 31831196 31831231 -88453081 + (TAAAA)n Simple_repeat Simple_repeat 5 39 0 5 827 1592 243 123 18 chr13 31831231 31831547 -88452765 - MTD-int LTR MaLR -214 1366 1025 5 827 501 333 64 0 chr13 31831685 31831889 -88452423 - Tigger5 DNA MER2_type -2186 220 4 5 827 334 251 33 108 chr13 31833241 31833455 -88450857 + Charlie2b DNA MER1_type 2203 2400 -382 5 827 1306 232 37 31 chr13 31833578 31833929 -88450383 - MTD-int LTR MaLR -905 353 1 5 827 1600 212 71 10 chr13 31833929 31834324 -88449988 - MTD LTR MaLR 0 419 1 5 827 241 111 0 0 chr13 31834698 31834734 -88449578 - B3 SINE B2 -179 37 2 5 827 5034 93 11 11 chr13 31834967 31835671 -88448641 - L1_Mus4 LINE L1 0 6636 5933 5 827 1507 71 67 0 chr13 31835671 31835881 -88448431 + L1_Mus4 LINE L1 5670 5893 -743 5 827 696 83 2 4 chr13 31835889 31835992 -88448320 + L1Md_F2 LINE L1 5506 5615 -559 5 827 8469 32 1 11 chr13 31835992 31836998 -88447314 + L1Md_F2 LINE L1 5587 6582 0 5 827 249 307 53 0 chr13 31837246 31837321 -88446991 - ID4_ SINE ID -4 79 1 5 827 495 0 0 0 chr13 31837771 31837826 -88446486 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 827 2246 150 72 16 chr13 31838095 31838468 -88445844 + ORR1B1 LTR MaLR 1 394 0 5 827 450 0 0 0 chr13 31838838 31838888 -88445424 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 827 462 49 0 0 chr13 31838888 31838948 -88445364 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 827 2215 224 40 25 chr13 31840744 31841267 -88443045 + MT2A LTR ERVL 1 531 -2 5 827 1003 103 7 0 chr13 31841315 31841451 -88442861 + B1_Mus1 SINE Alu 2 138 -10 5 827 2545 118 8 6 chr13 31841474 31841840 -88442472 + ORR1B2 LTR MaLR 1 367 0 5 827 290 307 13 0 chr13 31842587 31842662 -88441650 + ID4 SINE ID 2 77 -6 5 827 508 286 121 12 chr13 31842858 31843031 -88441281 - MER102b DNA MER1_type -149 192 1 5 827 346 324 59 54 chr13 31843445 31843667 -88440645 - MER44B DNA MER2_type -21 529 307 5 827 299 229 91 45 chr13 31843640 31843750 -88440562 - Tigger7 DNA MER2_type -2080 411 297 5 827 1140 278 34 10 chr13 31843794 31844092 -88440220 + Lx7 LINE L1 6953 7257 -439 5 827 582 15 0 0 chr13 31844165 31844232 -88440080 + (GA)n Simple_repeat Simple_repeat 1 67 0 5 827 1256 104 44 0 chr13 31844278 31844461 -88439851 + B2_Mm2 SINE B2 1 191 -4 5 827 28 48 0 0 chr13 31844479 31844521 -88439791 + AT_rich Low_complexity Low_complexity 1 42 0 5 827 311 276 60 20 chr13 31844587 31844687 -88439625 - RMER10A LTR ERVL -25 417 314 5 827 390 248 70 31 chr13 31845040 31845169 -88439143 - RLTR42-int LTR ERVK -1766 4371 4238 5 827 473 254 87 106 chr13 31845449 31845867 -88438445 - RLTR42-int LTR ERVK -2172 3965 3736 5 827 285 222 35 160 chr13 31845895 31846022 -88438290 - RLTR42-int LTR ERVK -2549 3588 3487 5 827 2390 163 42 5 chr13 31846022 31846428 -88437884 - MTC LTR MaLR 0 421 1 5 827 286 239 49 118 chr13 31846428 31846593 -88437719 - RLTR42-int LTR ERVK -2651 3486 3186 5 827 723 190 87 22 chr13 31846620 31846803 -88437509 + B2_Mm2 SINE B2 1 195 0 5 827 577 235 84 101 chr13 31846942 31847179 -88437133 - RLTR42-int LTR ERVK -3045 3092 2860 5 827 430 259 132 26 chr13 31847231 31847458 -88436854 - RLTR42-int LTR ERVK -1472 7487 7333 5 827 776 304 4 4 chr13 31847458 31847484 -88436828 + L1_Mus4 LINE L1 5656 5682 -1791 5 827 2315 108 0 26 chr13 31847484 31847835 -88436477 - Lx LINE L1 0 6654 6313 5 827 4852 65 8 0 chr13 31847835 31848444 -88435868 + L1_Mus4 LINE L1 5683 6299 -337 5 827 646 273 51 40 chr13 31848444 31848719 -88435593 - RLTR42-int LTR ERVK -3531 2606 2329 5 827 884 195 88 42 chr13 31848693 31848977 -88435335 - RLTR42-int LTR ERVK -3380 2142 1846 5 827 21 0 0 0 chr13 31849290 31849311 -88435001 + AT_rich Low_complexity Low_complexity 1 21 0 5 827 271 258 30 0 chr13 31849319 31849385 -88434927 - RLTR42-int LTR ERVK -3658 1864 1797 5 827 672 206 170 89 chr13 31849430 31849654 -88434658 - RLTR42-int LTR ERVK -3727 1795 1554 5 827 328 161 71 47 chr13 31849654 31849739 -88434573 - RLTR42-int LTR ERVK -3912 1610 1524 5 827 251 157 113 14 chr13 31849736 31849807 -88434505 - RLTR42-int LTR ERVK -5160 977 900 5 828 242 315 0 14 chr13 31850783 31850857 -88433455 + GA-rich Low_complexity Low_complexity 1 73 0 5 828 447 236 36 9 chr13 31851289 31851400 -88432912 + B3 SINE B2 98 211 -5 5 828 447 315 63 0 chr13 31851422 31851565 -88432747 - MER44B DNA MER2_type -356 194 43 5 828 186 258 123 46 chr13 31852519 31852584 -88431728 - MIR3 SINE MIR -137 71 2 5 828 266 221 132 0 chr13 31854091 31854159 -88430153 + ID4 SINE ID 1 77 -6 5 828 234 0 0 0 chr13 31854393 31854419 -88429893 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 828 718 73 0 27 chr13 31855252 31855364 -88428948 + (GAAAA)n Simple_repeat Simple_repeat 2 110 0 5 828 202 261 0 0 chr13 31856992 31857038 -88427274 + G-rich Low_complexity Low_complexity 2 47 0 5 828 196 279 43 29 chr13 31857527 31857597 -88426715 + L3b LINE CR1 19 89 -393 5 828 495 311 101 9 chr13 31858384 31858611 -88425701 + MER2 DNA MER2_type 12 259 -86 5 828 2080 143 3 58 chr13 31858654 31859002 -88425310 - ORR1A4 LTR MaLR 0 329 1 5 828 3288 56 5 0 chr13 31859273 31859667 -88424645 + MTA_Mm LTR MaLR 1 396 0 5 828 423 0 0 0 chr13 31859802 31859849 -88424463 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 828 1168 306 69 17 chr13 31859857 31860219 -88424093 + ORR1D1-int LTR MaLR 216 596 -984 5 828 574 246 0 0 chr13 31860222 31860336 -88423976 + PB1D9 SINE Alu 7 120 0 5 828 607 212 61 0 chr13 31860328 31860460 -88423852 + ORR1D1-int LTR MaLR 579 718 -862 5 828 234 0 0 0 chr13 31860489 31860515 -88423797 + (A)n Simple_repeat Simple_repeat 1 26 0 5 828 1842 280 39 21 chr13 31860606 31861404 -88422908 + Lx6 LINE L1 6455 7434 -26 5 828 917 274 196 18 chr13 31861413 31861767 -88422545 + ORR1D1-int LTR MaLR 801 1206 -303 5 828 698 214 28 0 chr13 31862930 31863075 -88421237 + B1_Mur2 SINE Alu 1 149 0 5 828 932 186 82 5 chr13 31863120 31863315 -88420997 + B3 SINE B2 7 216 0 5 828 1498 175 133 41 chr13 31863587 31863932 -88420380 - ORR1C1 LTR MaLR -1 377 1 5 828 211 237 14 49 chr13 31863979 31864121 -88420191 + (CAA)n Simple_repeat Simple_repeat 1 137 0 5 828 318 50 0 0 chr13 31864175 31864215 -88420097 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 828 971 109 7 26 chr13 31864342 31864493 -88419819 + B1_Mus1 SINE Alu 1 148 0 5 828 379 278 76 109 chr13 31864637 31864912 -88419400 + L1MC LINE L1 5384 5649 -2233 5 828 1616 198 50 19 chr13 31864946 31865307 -88419005 + ORR1D1 LTR MaLR 3 374 0 5 828 869 159 7 0 chr13 31865397 31865542 -88418770 + URR1A DNA MER1_type 81 226 0 5 828 1209 110 0 0 chr13 31866010 31866230 -88418082 + (CTA)n Simple_repeat Simple_repeat 1 220 0 5 828 883 190 0 0 chr13 31866239 31866381 -88417931 - B1_Mur4 SINE Alu -6 144 3 5 828 342 0 0 0 chr13 31868006 31868044 -88416268 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 828 681 13 0 0 chr13 31868115 31868193 -88416119 + (GA)n Simple_repeat Simple_repeat 1 78 0 5 828 770 215 73 5 chr13 31868858 31869050 -88415262 + B3 SINE B2 2 206 -10 5 828 31 0 0 0 chr13 31869176 31869207 -88415105 + AT_rich Low_complexity Low_complexity 1 31 0 5 828 185 375 22 43 chr13 31869320 31869412 -88414900 + L2a LINE L2 3316 3405 -21 5 828 799 288 39 0 chr13 31869656 31869889 -88414423 + RMER1B Other Other 91 332 -734 5 828 522 0 0 0 chr13 31869908 31869966 -88414346 + (GGAA)n Simple_repeat Simple_repeat 3 60 0 5 828 543 283 0 65 chr13 31870284 31870439 -88413873 - B4A SINE B4 -142 150 6 5 828 474 223 0 0 chr13 31870452 31870573 -88413739 + (TG)n Simple_repeat Simple_repeat 1 121 0 5 828 298 344 0 0 chr13 31870574 31870667 -88413645 - PB1D10 SINE Alu -13 104 12 5 828 472 242 99 25 chr13 31870808 31870969 -88413343 + Lx8 LINE L1 7228 7400 -73 5 828 261 287 23 0 chr13 31870941 31871028 -88413284 + RMER1C Other Other 1240 1328 -14 5 828 182 128 0 25 chr13 31871714 31871754 -88412558 + CT-rich Low_complexity Low_complexity 2 40 0 5 828 487 294 40 58 chr13 31873151 31873509 -88410803 - MER82 DNA MER2_type -385 268 26 5 828 244 347 129 16 chr13 31873510 31873703 -88410609 - Tigger7 DNA MER2_type -1 2490 2276 5 828 285 294 0 84 chr13 31873702 31873821 -88410491 - Tigger7 DNA MER2_type -2375 116 8 5 828 894 204 113 0 chr13 31874551 31874737 -88409575 + MTD LTR MaLR 1 207 -212 5 828 822 133 0 0 chr13 31874741 31874861 -88409451 + B1_Mur2 SINE Alu 30 149 0 5 828 793 98 0 22 chr13 31874861 31874997 -88409315 + (GAAA)n Simple_repeat Simple_repeat 2 134 0 5 828 830 160 131 34 chr13 31875000 31875175 -88409137 + B2_Mm2 SINE B2 2 193 -2 5 828 594 211 44 0 chr13 31875162 31875276 -88409036 + MTD LTR MaLR 195 313 -106 5 828 956 207 14 33 chr13 31875283 31875493 -88408819 - B3 SINE B2 -10 206 1 5 828 27 0 0 0 chr13 31875499 31875526 -88408786 + AT_rich Low_complexity Low_complexity 1 27 0 5 828 768 157 0 0 chr13 31875549 31875670 -88408642 - B1_Mus1 SINE Alu 0 148 28 5 828 239 328 129 35 chr13 31875691 31875893 -88408419 + Tigger7 DNA MER2_type 2265 2485 -6 5 828 284 341 96 23 chr13 31875952 31875970 -88408342 - YREP_Mm Unknown Unknown -1482 330 283 5 828 598 246 0 0 chr13 31875970 31876080 -88408232 + ID_B1 SINE B4 91 200 -24 5 828 284 341 96 23 chr13 31876080 31876129 -88408183 - YREP_Mm Unknown Unknown -1482 282 141 5 828 1182 144 119 0 chr13 31876132 31876334 -88407978 + URR1A DNA MER1_type 1 226 0 5 828 279 0 0 0 chr13 31876757 31876788 -88407524 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 828 225 0 0 0 chr13 31877521 31877546 -88406766 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 828 934 208 18 62 chr13 31877594 31877820 -88406492 + B3 SINE B2 1 216 0 6 828 2420 85 35 0 chr13 31879032 31879348 -88404964 + ORR1A2 LTR MaLR 1 327 0 6 828 8799 127 168 25 chr13 31879348 31879740 -88404572 + ORR1A2-int LTR MaLR 8 376 -1587 6 828 1298 73 19 108 chr13 31879740 31879954 -88404358 - B2_Mm2 SINE B2 0 195 1 6 828 8799 127 168 25 chr13 31879954 31880758 -88403554 + ORR1A2-int LTR MaLR 377 1415 -548 6 828 243 0 0 0 chr13 31880758 31880785 -88403527 + (CAG)n Simple_repeat Simple_repeat 2 28 0 6 828 8799 127 168 25 chr13 31880785 31881298 -88403014 + ORR1A2-int LTR MaLR 1416 1962 -1 6 828 1819 128 94 0 chr13 31881298 31881595 -88402717 + ORR1A2 LTR MaLR 1 325 -1 6 828 1673 206 97 10 chr13 31881661 31882044 -88402268 - MTD LTR MaLR 0 419 4 6 828 393 22 0 0 chr13 31882416 31882462 -88401850 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 6 828 6877 58 21 0 chr13 31882712 31883568 -88400744 - L1_Mus1 LINE L1 -1 6566 5693 6 828 5439 71 8 3 chr13 31883568 31884276 -88400036 + L1_Mus1 LINE L1 4992 5703 -180 6 828 270 0 0 0 chr13 31885151 31885181 -88399131 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 828 2124 56 0 0 chr13 31886418 31886670 -88397642 - L1Md_F2 LINE L1 -190 6392 6141 6 828 1541 37 0 0 chr13 31886670 31886858 -88397454 + L1Md_A LINE L1 6394 6581 -1 6 828 370 227 51 10 chr13 31887944 31888042 -88396270 + RSINE1 SINE B4 3 104 -61 6 828 294 73 0 0 chr13 31888850 31888891 -88395421 + (T)n Simple_repeat Simple_repeat 1 41 0 6 828 22 0 0 0 chr13 31889105 31889127 -88395185 + AT_rich Low_complexity Low_complexity 1 22 0 6 828 207 114 0 0 chr13 31889127 31889162 -88395150 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 828 239 235 41 7 chr13 31891265 31891341 -88392971 + PB1D10 SINE Alu 16 97 -52 6 828 199 345 0 0 chr13 31891813 31891871 -88392441 + MIR SINE MIR 94 151 -111 6 828 360 0 0 0 chr13 31892224 31892264 -88392048 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 828 225 0 0 0 chr13 31892264 31892288 -88392024 + (GA)n Simple_repeat Simple_repeat 2 26 0 6 828 918 0 0 0 chr13 31894244 31894346 -88389966 + (TTC)n Simple_repeat Simple_repeat 1 102 0 6 828 246 32 0 0 chr13 31894770 31894801 -88389511 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 828 459 0 0 0 chr13 31896873 31896924 -88387388 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 828 31 58 0 0 chr13 31898274 31898326 -88385986 + GC_rich Low_complexity Low_complexity 1 52 0 6 828 21 71 0 0 chr13 31898569 31898611 -88385701 + GC_rich Low_complexity Low_complexity 1 42 0 6 828 249 172 0 0 chr13 31898690 31898754 -88385558 + T-rich Low_complexity Low_complexity 1 64 0 6 828 238 244 11 58 chr13 31898872 31899046 -88385266 + (CGCGG)n Simple_repeat Simple_repeat 4 169 0 6 828 24 0 0 0 chr13 31899160 31899184 -88385128 + GC_rich Low_complexity Low_complexity 1 24 0 6 828 26 50 0 0 chr13 31899661 31899701 -88384611 + GC_rich Low_complexity Low_complexity 1 40 0 6 828 264 130 0 0 chr13 31900198 31900244 -88384068 + (CGG)n Simple_repeat Simple_repeat 2 47 0 6 828 30 0 0 0 chr13 31903176 31903206 -88381106 + GC_rich Low_complexity Low_complexity 1 30 0 6 828 21 36 0 0 chr13 31903420 31903448 -88380864 + GC_rich Low_complexity Low_complexity 1 28 0 6 828 21 0 0 0 chr13 31906962 31906983 -88377329 + AT_rich Low_complexity Low_complexity 1 21 0 6 828 1250 83 0 11 chr13 31912254 31912436 -88371876 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 828 458 215 7 11 chr13 31914898 31915008 -88369304 + B1_Mur4 SINE Alu 9 120 -29 6 828 1084 94 24 0 chr13 31915025 31915195 -88369117 + (GAAA)n Simple_repeat Simple_repeat 3 176 0 6 828 419 351 107 67 chr13 31917719 31918018 -88366294 + MER2 DNA MER2_type 7 317 -28 6 828 224 316 0 37 chr13 31919861 31919943 -88364369 - MIR SINE MIR -99 109 31 6 828 226 320 49 49 chr13 31920333 31920415 -88363897 - ID4_ SINE ID 0 83 2 6 828 247 357 17 105 chr13 31924232 31924263 -88360049 + B4A SINE B4 71 224 -65 6 828 542 294 22 14 chr13 31924263 31924401 -88359911 + B1F SINE Alu 9 147 -2 6 828 591 53 0 0 chr13 31924696 31924771 -88359541 + (TC)n Simple_repeat Simple_repeat 2 76 0 6 828 577 224 37 7 chr13 31927028 31927163 -88357149 + B1F2 SINE Alu 9 147 -2 6 828 533 188 430 76 chr13 31927185 31927398 -88356914 + B4A SINE B4 3 292 0 6 828 23 92 0 0 chr13 31928091 31928156 -88356156 + AT_rich Low_complexity Low_complexity 1 65 0 6 828 25 51 0 0 chr13 31928251 31928290 -88356022 + AT_rich Low_complexity Low_complexity 1 39 0 6 828 2180 104 42 0 chr13 31928351 31928658 -88355654 + ORR1A2 LTR MaLR 1 320 -7 6 828 761 232 0 14 chr13 31928658 31928798 -88355514 - B1_Mur1 SINE Alu -11 138 1 6 828 762 297 109 48 chr13 31928985 31929137 -88355175 + L1_Rod LINE L1 4814 4967 -880 6 828 775 209 7 26 chr13 31929137 31929289 -88355023 + B1_Mur1 SINE Alu 1 149 0 6 828 762 297 109 48 chr13 31929289 31929844 -88354468 + L1_Rod LINE L1 4968 5564 -283 6 828 269 68 23 0 chr13 31930201 31930245 -88354067 + (ATATG)n Simple_repeat Simple_repeat 4 48 0 6 828 745 235 98 5 chr13 31930449 31930633 -88353679 + B3 SINE B2 16 216 0 6 828 226 333 115 49 chr13 31932175 31932358 -88351954 + L2b LINE L2 3177 3371 -4 6 828 268 274 104 52 chr13 31935659 31935794 -88348518 + MIR3 SINE MIR 62 203 -65 6 828 768 245 140 46 chr13 31936608 31936792 -88347520 + L1MB3 LINE L1 4459 4685 -1461 6 828 6129 129 30 33 chr13 31936792 31937783 -88346529 + Lx4B LINE L1 6055 7042 -16 6 828 306 50 0 0 chr13 31937783 31937823 -88346489 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 6 828 771 282 132 30 chr13 31937823 31938523 -88345789 + L1MB3 LINE L1 4686 5493 -687 6 828 338 317 54 32 chr13 31938550 31938736 -88345576 + L1MB3 LINE L1 5481 5670 -513 6 828 732 91 0 0 chr13 31938745 31938844 -88345468 - B2_Mm2 SINE B2 -96 99 1 6 828 608 288 96 45 chr13 31938878 31939231 -88345081 + L1MB3 LINE L1 5677 6047 -136 6 828 554 289 91 87 chr13 31939326 31939534 -88344778 - B3A SINE B2 -5 211 3 6 828 801 283 16 11 chr13 31939660 31939849 -88344463 - B3 SINE B2 -25 191 2 6 828 708 111 0 0 chr13 31939856 31939964 -88344348 + (TA)n Simple_repeat Simple_repeat 2 109 0 6 828 312 27 0 0 chr13 31940959 31940996 -88343316 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 828 360 0 0 0 chr13 31941281 31941321 -88342991 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 828 304 311 27 0 chr13 31942524 31942598 -88341714 + ID4_ SINE ID 2 77 -6 6 828 1081 104 0 20 chr13 31942745 31942883 -88341429 + B1_Mus1 SINE Alu 1 138 -10 6 828 213 39 0 0 chr13 31942883 31942909 -88341403 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 828 207 323 128 45 chr13 31943044 31943177 -88341135 + L3 LINE CR1 4260 4403 -86 6 828 261 0 0 0 chr13 31943797 31943826 -88340486 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6 828 1359 97 5 0 chr13 31944951 31945137 -88339175 - B2_Mm1t SINE B2 -6 187 1 6 828 416 223 72 32 chr13 31945867 31945992 -88338320 - MIRb SINE MIR -52 216 87 6 828 285 268 56 10 chr13 31946272 31946395 -88337917 + MLT1A LTR MaLR 2 132 -233 6 828 267 320 10 0 chr13 31946533 31946633 -88337679 + MLT1A LTR MaLR 306 406 -2 6 828 692 54 11 0 chr13 31947618 31947711 -88336601 + (TTTTC)n Simple_repeat Simple_repeat 3 96 0 6 828 288 70 0 0 chr13 31947718 31947761 -88336551 + (TTCA)n Simple_repeat Simple_repeat 2 44 0 6 828 430 174 257 0 chr13 31947988 31948097 -88336215 + B1_Mm SINE Alu 1 137 -10 6 828 234 0 0 0 chr13 31948099 31948125 -88336187 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 828 27 0 0 0 chr13 31949319 31949346 -88334966 + AT_rich Low_complexity Low_complexity 1 27 0 6 828 482 238 98 8 chr13 31949366 31949489 -88334823 - RSINE1 SINE B4 -28 137 4 6 828 261 163 0 0 chr13 31950025 31950074 -88334238 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 6 828 590 289 164 10 chr13 31950691 31951002 -88333310 + ORR1E LTR MaLR 1 359 0 6 828 23 54 0 0 chr13 31952096 31952133 -88332179 + AT_rich Low_complexity Low_complexity 1 37 0 6 828 244 355 0 0 chr13 31952385 31952461 -88331851 - ID4_ SINE ID 0 83 8 6 828 663 283 35 0 chr13 31952561 31952759 -88331553 + B4A SINE B4 28 232 -60 6 828 352 274 28 19 chr13 31952759 31952867 -88331445 + Lx8 LINE L1 6888 6996 -477 6 828 266 324 0 0 chr13 31952897 31952971 -88331341 + Lx8 LINE L1 7165 7238 -235 6 828 623 186 81 0 chr13 31953082 31953206 -88331106 + B1_Mur4 SINE Alu 9 142 -8 6 828 286 181 164 14 chr13 31953465 31953538 -88330774 + PB1D10 SINE Alu 33 116 -1 6 828 630 65 0 0 chr13 31953865 31953957 -88330355 + (CA)n Simple_repeat Simple_repeat 2 93 0 6 828 256 200 0 32 chr13 31954423 31954485 -88329827 - PB1D10 SINE Alu -3 114 55 6 828 350 250 26 0 chr13 31954678 31954754 -88329558 - ID SINE ID -141 83 6 6 828 233 317 0 0 chr13 31954756 31954816 -88329496 + CT-rich Low_complexity Low_complexity 2 61 0 6 828 910 240 48 22 chr13 31954892 31955122 -88329190 - B4 SINE B4 -10 282 47 6 828 420 67 0 0 chr13 31957306 31957366 -88326946 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 828 463 296 34 20 chr13 31958376 31958524 -88325788 + RSINE1 SINE B4 3 152 -13 6 828 908 257 128 11 chr13 31958593 31958951 -88325361 - L1MC2 LINE L1 -77 6685 6286 6 828 260 236 284 31 chr13 31958985 31959147 -88325165 + L1MD LINE L1 3842 4044 -2102 6 828 288 0 0 0 chr13 31959162 31959194 -88325118 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 6 828 449 233 0 19 chr13 31959194 31959299 -88325013 - PB1D10 SINE Alu -13 104 2 6 828 620 278 117 25 chr13 31959314 31959631 -88324681 - L1MC2 LINE L1 -529 6233 5888 6 828 2374 268 109 92 chr13 31959660 31960686 -88323626 - L1MC2 LINE L1 -1018 5546 4426 6 828 523 252 34 0 chr13 31960686 31960805 -88323507 - RSINE1 SINE B4 -10 155 33 6 828 2374 268 109 92 chr13 31960805 31961341 -88322971 - L1MC2 LINE L1 -1018 4425 3838 6 828 822 268 158 39 chr13 31961352 31962408 -88321904 - L1MC2 LINE L1 -3158 3406 2980 6 828 497 250 17 0 chr13 31963027 31963147 -88321165 + RSINE1 SINE B4 3 124 -41 6 828 183 186 0 0 chr13 31964238 31964281 -88320031 + A-rich Low_complexity Low_complexity 5 47 0 6 828 318 50 0 0 chr13 31966104 31966144 -88318168 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 828 502 180 57 90 chr13 31966154 31966276 -88318036 - RSINE1 SINE B4 -45 120 3 6 828 821 51 246 0 chr13 31967098 31967216 -88317096 - B1_Mus2 SINE Alu 0 147 1 6 828 370 271 84 54 chr13 31967545 31967806 -88316506 + L1M5 LINE L1 5505 5773 -406 7 828 22 0 0 0 chr13 31968424 31968446 -88315866 + AT_rich Low_complexity Low_complexity 1 22 0 7 828 763 166 0 121 chr13 31969628 31969793 -88314519 + B1_Mur2 SINE Alu 5 149 0 7 828 816 171 216 0 chr13 31971817 31971998 -88312314 - URR1B DNA MER1_type 0 225 6 7 828 6438 30 3 0 chr13 31973497 31974233 -88310079 - L1Md_F2 LINE L1 -8 6574 5837 7 828 274 278 105 47 chr13 31974241 31974498 -88309814 - L1MEc LINE L1 -4914 1486 1215 7 828 968 299 138 40 chr13 31974646 31974727 -88309585 - L1MEc LINE L1 -5473 927 839 7 828 631 228 27 7 chr13 31974727 31974873 -88309439 - B1F2 SINE Alu 0 149 1 7 828 968 299 138 40 chr13 31974873 31975590 -88308722 - L1MEc LINE L1 -5562 838 52 7 828 3624 48 5 2 chr13 31976273 31976708 -88307604 - RLTR10C LTR ERVK 0 436 1 7 828 4012 128 70 22 chr13 31978197 31978915 -88305397 - RMER6A LTR ERVK -4 752 1 7 828 466 71 360 10 chr13 31978976 31979076 -88305236 - B2_Mm2 SINE B2 -14 181 47 7 828 1258 108 11 0 chr13 31979161 31979337 -88304975 - B2_Mm1t SINE B2 -14 179 2 7 828 213 121 0 0 chr13 31979347 31979380 -88304932 + (T)n Simple_repeat Simple_repeat 1 33 0 7 828 184 270 139 23 chr13 31979521 31979650 -88304662 - MIRc SINE MIR -2 266 123 7 828 23 0 0 0 chr13 31979882 31979905 -88304407 + AT_rich Low_complexity Low_complexity 1 23 0 7 828 29 28 0 0 chr13 31981265 31981301 -88303011 + AT_rich Low_complexity Low_complexity 1 36 0 7 828 3801 106 38 2 chr13 31981301 31981413 -88302899 - Lx LINE L1 -6 6648 6518 7 828 198 71 0 0 chr13 31981413 31981441 -88302871 + (CCCA)n Simple_repeat Simple_repeat 4 31 0 7 103 3801 106 38 2 chr13 31981441 31981879 -88302433 - Lx LINE L1 -137 6517 6079 7 829 719 285 0 51 chr13 31982029 31982225 -88302087 + B4A SINE B4 16 201 -91 7 829 429 76 0 0 chr13 31982239 31982305 -88302007 + (TC)n Simple_repeat Simple_repeat 1 66 0 7 829 372 247 0 0 chr13 31982545 31982633 -88301679 + B3A SINE B2 1 88 -110 7 829 1636 239 50 110 chr13 31982633 31983216 -88301096 - RMER19C LTR ERVK 0 611 64 7 829 251 278 122 0 chr13 31983692 31983782 -88300530 - PB1D7 SINE Alu 0 120 20 7 829 262 218 36 0 chr13 31983728 31983783 -88300529 - ID_B1 SINE B4 -70 154 98 7 829 1600 37 5 0 chr13 31986895 31987084 -88297228 - B2_Mm1a SINE B2 -2 191 2 7 829 515 90 13 0 chr13 31987226 31987304 -88297008 + (GGGA)n Simple_repeat Simple_repeat 2 80 0 7 829 408 55 0 64 chr13 31987360 31987438 -88296874 - L1Md_F2 LINE L1 -6 6578 6506 7 829 4987 49 0 0 chr13 31987438 31988029 -88296283 - L1Md_F2 LINE L1 -381 6201 5611 7 829 387 0 0 0 chr13 31988201 31988244 -88296068 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 829 537 16 0 0 chr13 31988244 31988305 -88296007 + (GA)n Simple_repeat Simple_repeat 2 63 0 7 829 830 86 23 0 chr13 31988605 31988733 -88295579 - RLTR15 LTR ERVK 0 359 229 7 829 245 213 21 0 chr13 31989024 31989071 -88295241 + B1_Mus1 SINE Alu 2 49 -99 7 829 210 212 22 187 chr13 31989025 31989164 -88295148 + ID_B1 SINE B4 84 199 -25 7 829 375 242 110 10 chr13 31989110 31989210 -88295102 + B1_Mur2 SINE Alu 40 149 0 7 829 1170 56 7 0 chr13 31989828 31989972 -88294340 - B1_Mus1 SINE Alu -2 146 2 7 829 229 256 12 93 chr13 31991750 31991836 -88292476 - ID4 SINE ID -3 80 2 7 829 205 186 0 0 chr13 31991984 31992027 -88292285 + T-rich Low_complexity Low_complexity 1 43 0 7 829 185 0 40 0 chr13 31992029 31992054 -88292258 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 7 829 338 211 0 0 chr13 31992102 31992159 -88292153 - RSINE1 SINE B4 -108 57 1 7 829 181 299 213 0 chr13 31992582 31992709 -88291603 + MIRb SINE MIR 6 159 -109 7 829 1041 186 69 25 chr13 31993086 31993290 -88291022 + B3 SINE B2 1 213 -3 7 829 243 103 0 0 chr13 31993325 31993364 -88290948 + (GA)n Simple_repeat Simple_repeat 1 39 0 7 829 1070 103 0 27 chr13 31997720 31997870 -88286442 + B1_Mus2 SINE Alu 2 147 0 7 829 257 261 231 7 chr13 31998964 31999107 -88285205 + MLT1D LTR MaLR 327 501 -4 7 829 612 0 0 0 chr13 31999837 31999905 -88284407 + (TC)n Simple_repeat Simple_repeat 2 69 0 7 829 198 0 0 0 chr13 31999905 31999926 -88284386 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 829 238 218 0 35 chr13 31999943 32000000 -88284312 - B1_Mur4 SINE Alu 0 150 96 7 829 568 183 0 0 chr13 32000000 32000093 -88284219 - B1_Mur2 SINE Alu -55 94 2 1 829 238 255 16 124 chr13 32000093 32000180 -88284132 - MT2B2 LTR ERVL -326 258 185 2 829 721 303 6 17 chr13 32000767 32000948 -88283364 + B3 SINE B2 6 184 -32 3 829 788 199 165 0 chr13 32001460 32001636 -88282676 + B3 SINE B2 1 205 -11 4 829 906 135 0 14 chr13 32001744 32001887 -88282425 + B1_Mus1 SINE Alu 7 147 -1 5 829 2261 66 10 3 chr13 32001988 32002293 -88282019 - L1_Mus3 LINE L1 0 6638 6332 6 829 276 265 133 0 chr13 32002843 32002941 -88281371 + MTEa LTR MaLR 269 379 0 7 829 306 0 0 0 chr13 32004731 32004765 -88279547 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 829 441 0 0 0 chr13 32005032 32005081 -88279231 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 829 351 311 59 53 chr13 32005295 32005482 -88278830 - MIR SINE MIR -67 195 8 1 829 414 327 55 73 chr13 32005504 32005722 -88278590 + B3 SINE B2 1 214 -2 1 829 180 0 0 0 chr13 32005805 32005825 -88278487 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1 829 221 286 18 0 chr13 32005830 32005886 -88278426 - ID4 SINE ID -13 70 14 1 829 236 226 29 88 chr13 32006529 32006597 -88277715 - ID4_ SINE ID -18 65 2 1 829 647 272 12 18 chr13 32008307 32008472 -88275840 - RSINE1 SINE B4 0 165 2 1 829 218 345 104 35 chr13 32008584 32008665 -88275647 - L2c LINE L2 -73 3314 3231 1 829 1203 201 5 0 chr13 32008665 32008889 -88275423 + URR1B DNA MER1_type 1 225 0 1 829 218 345 104 35 chr13 32008889 32009008 -88275304 - L2c LINE L2 -157 3230 3101 1 829 261 57 0 0 chr13 32011321 32011356 -88272956 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 829 542 280 42 0 chr13 32011881 32012024 -88272288 - RSINE1 SINE B4 -13 152 4 1 829 231 353 35 0 chr13 32012753 32012838 -88271474 + RMER15 LTR ERVL 374 461 -114 2 829 441 50 0 0 chr13 32012858 32012918 -88271394 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 829 313 244 11 58 chr13 32013116 32013203 -88271109 + ID4 SINE ID 1 83 0 2 829 306 311 166 12 chr13 32013703 32013872 -88270440 + HAL1 LINE L1 473 667 -1840 2 829 408 297 44 152 chr13 32013890 32014259 -88270053 + HAL1 LINE L1 729 1048 -1459 2 829 1319 107 16 0 chr13 32014259 32014446 -88269866 + B2_Mm2 SINE B2 2 191 -4 2 829 408 307 93 105 chr13 32014446 32014980 -88269332 + HAL1 LINE L1 1049 1586 -921 2 829 328 329 154 19 chr13 32015196 32015559 -88268753 + HAL1 LINE L1 1940 2351 -156 2 829 183 42 0 0 chr13 32015765 32015789 -88268523 + (CAA)n Simple_repeat Simple_repeat 2 25 0 2 829 270 0 0 0 chr13 32016961 32016991 -88267321 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 829 201 258 30 61 chr13 32018099 32018165 -88266147 - L2b LINE L2 -12 3363 3300 2 829 217 289 0 62 chr13 32018405 32018501 -88265811 + G-rich Low_complexity Low_complexity 1 90 0 2 829 203 0 37 0 chr13 32019433 32019460 -88264852 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 2 829 711 319 46 81 chr13 32019694 32020066 -88264246 + ORR1E LTR MaLR 1 359 0 3 829 1148 75 7 0 chr13 32020126 32020273 -88264039 - B1_Mus1 SINE Alu 0 148 1 3 829 2957 27 5 16 chr13 32020620 32020990 -88263322 - L1Md_F3 LINE L1 0 6584 6219 3 829 232 276 17 0 chr13 32021653 32021769 -88262543 + (TG)n Simple_repeat Simple_repeat 1 118 0 3 829 572 200 6 18 chr13 32021789 32021957 -88262355 + (TG)n Simple_repeat Simple_repeat 1 166 0 3 829 210 310 35 0 chr13 32021957 32022015 -88262297 - ID SINE ID -144 80 21 3 829 450 0 0 0 chr13 32022802 32022852 -88261460 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 829 539 299 208 29 chr13 32022852 32023227 -88261085 - MER44B DNA MER2_type -113 437 2 3 829 384 306 71 9 chr13 32023777 32023889 -88260423 - RSINE1 SINE B4 -41 124 6 3 829 871 233 33 0 chr13 32024986 32025166 -88259146 + B3 SINE B2 31 216 0 3 829 406 226 8 38 chr13 32025745 32025878 -88258434 - L1ME1 LINE L1 -258 5921 5793 3 829 423 307 204 14 chr13 32025904 32026271 -88258041 - L1MD LINE L1 -2272 5723 5287 4 829 369 0 0 0 chr13 32026384 32026425 -88257887 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 829 235 245 0 0 chr13 32026826 32026875 -88257437 + B3A SINE B2 2 50 -148 4 829 475 98 325 0 chr13 32026868 32027006 -88257306 - RMER4B LTR ERVK -402 183 1 4 829 512 294 156 0 chr13 32027214 32027374 -88256938 + ID_B1 SINE B4 40 224 0 4 829 270 106 0 0 chr13 32028258 32028305 -88256007 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 4 829 221 250 18 18 chr13 32028552 32028609 -88255703 + ID_B1 SINE B4 83 139 -85 4 829 584 196 0 0 chr13 32028640 32028742 -88255570 + B1_Mur2 SINE Alu 41 142 -7 4 829 227 299 31 10 chr13 32028842 32028940 -88255372 + L1MB4 LINE L1 5570 5669 -505 4 829 5901 81 19 5 chr13 32028991 32029810 -88254502 + Lx3_Mus LINE L1 6171 7001 -8 4 829 1963 106 9 25 chr13 32029830 32030150 -88254162 + L1_Mus3 LINE L1 6321 6635 -3 5 829 262 215 29 3 chr13 32030151 32030253 -88254059 + L1MB4 LINE L1 5709 5812 -485 4 829 259 324 37 47 chr13 32030253 32030360 -88253952 - PB1D10 SINE Alu 0 117 12 5 829 659 255 123 7 chr13 32030389 32030665 -88253647 + L1MB4 LINE L1 5813 6120 -60 4 829 21 0 0 0 chr13 32031014 32031035 -88253277 + AT_rich Low_complexity Low_complexity 1 21 0 5 829 736 150 14 36 chr13 32031035 32031173 -88253139 + B1_Mur4 SINE Alu 1 135 -15 5 829 3615 207 24 6 chr13 32031190 32031996 -88252316 + RMER1B Other Other 178 1062 -4 5 829 183 42 0 0 chr13 32033193 32033217 -88251095 + (TATG)n Simple_repeat Simple_repeat 4 27 0 5 829 459 301 51 11 chr13 32033243 32033418 -88250894 + B3A SINE B2 1 182 -16 5 829 506 280 15 33 chr13 32033444 32033609 -88250703 + RMER20B LTR ERVK 1 161 -355 5 829 261 0 0 0 chr13 32034290 32034319 -88249993 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 5 829 272 225 0 0 chr13 32035207 32035278 -88249034 + (CA)n Simple_repeat Simple_repeat 1 71 0 5 829 252 0 0 0 chr13 32036257 32036285 -88248027 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 6 829 264 30 0 0 chr13 32036287 32036320 -88247992 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 6 829 799 183 30 0 chr13 32037301 32037432 -88246880 + B1_Mus1 SINE Alu 5 139 -9 6 829 189 0 0 0 chr13 32037433 32037454 -88246858 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 6 829 243 0 0 0 chr13 32037578 32037605 -88246707 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 829 324 319 28 21 chr13 32037736 32037880 -88246432 - B1_Mus1 SINE Alu -2 146 2 6 829 2760 174 137 43 chr13 32038097 32038624 -88245688 + Lx6 LINE L1 5084 5601 -279 6 829 1502 146 162 19 chr13 32038624 32038945 -88245367 + ORR1B2 LTR MaLR 1 367 0 6 829 2760 174 137 43 chr13 32038945 32039046 -88245266 + Lx6 LINE L1 5602 5781 -99 6 829 1782 97 11 4 chr13 32039046 32039315 -88244997 + L1_Mus3 LINE L1 6362 6632 -6 6 829 3768 211 99 19 chr13 32039315 32040293 -88244019 + Lx6 LINE L1 5782 6839 -621 6 829 342 0 0 0 chr13 32040293 32040331 -88243981 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 829 2478 198 78 0 chr13 32040340 32040856 -88243456 + Lx6 LINE L1 6901 7456 -4 6 829 186 43 0 0 chr13 32041976 32041999 -88242313 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 829 372 368 100 36 chr13 32042073 32042403 -88241909 - MLT1H LTR MaLR -197 352 2 7 829 314 234 234 0 chr13 32042476 32042587 -88241725 - B1F SINE Alu -3 146 10 7 829 376 307 58 32 chr13 32043810 32043965 -88240347 - MER5A DNA MER1_type 0 189 31 7 829 323 303 243 0 chr13 32043996 32044181 -88240131 + MIR SINE MIR 32 261 -1 7 829 575 277 7 7 chr13 32044321 32044470 -88239842 - MIR3 SINE MIR -7 201 53 7 829 25 0 0 0 chr13 32046246 32046271 -88238041 + AT_rich Low_complexity Low_complexity 1 25 0 7 829 207 156 0 0 chr13 32048328 32048360 -88235952 + GA-rich Low_complexity Low_complexity 2 33 0 7 829 823 284 54 29 chr13 32048974 32049250 -88235062 + B4A SINE B4 1 283 -9 7 829 396 0 0 0 chr13 32049807 32049851 -88234461 + (TC)n Simple_repeat Simple_repeat 2 45 0 7 829 21 0 0 0 chr13 32049896 32049917 -88234395 + AT_rich Low_complexity Low_complexity 1 21 0 8 829 246 32 0 0 chr13 32050172 32050203 -88234109 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 8 829 225 252 170 45 chr13 32050628 32050740 -88233572 - MIRc SINE MIR -125 143 18 8 829 24 0 0 0 chr13 32053269 32053293 -88231019 + AT_rich Low_complexity Low_complexity 1 24 0 8 829 2123 228 58 5 chr13 32053302 32053858 -88230454 - Lx9 LINE L1 -23 7621 7037 8 829 369 0 0 0 chr13 32054399 32054440 -88229872 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 829 606 306 94 0 chr13 32054444 32054604 -88229708 - B3A SINE B2 -23 175 1 8 829 747 145 207 72 chr13 32056544 32056737 -88227575 - URR1A DNA MER1_type -7 219 1 8 829 294 306 194 26 chr13 32056858 32057049 -88227263 + MIR SINE MIR 38 260 -2 8 829 253 73 0 68 chr13 32059857 32059916 -88224396 + (CAAA)n Simple_repeat Simple_repeat 1 55 0 8 829 676 291 19 46 chr13 32060136 32060352 -88223960 - B3 SINE B2 -6 210 1 9 829 185 86 57 0 chr13 32063606 32063641 -88220671 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 9 829 734 259 48 19 chr13 32064790 32064999 -88219313 - B3 SINE B2 0 216 2 9 829 205 278 19 0 chr13 32065199 32065253 -88219059 + MIRm SINE MIR 98 152 -124 9 829 214 115 19 19 chr13 32065914 32065967 -88218345 + A-rich Low_complexity Low_complexity 1 53 0 9 829 789 190 14 14 chr13 32066181 32066325 -88217987 + B1_Mus2 SINE Alu 3 146 -1 9 829 211 71 48 0 chr13 32066336 32066378 -88217934 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 9 829 198 0 0 0 chr13 32066951 32066973 -88217339 + (T)n Simple_repeat Simple_repeat 1 22 0 9 829 811 224 8 8 chr13 32068321 32068500 -88215812 + B3 SINE B2 37 215 -1 9 829 606 200 15 74 chr13 32068679 32068814 -88215498 + B1_Mur4 SINE Alu 23 149 -1 9 829 180 0 0 0 chr13 32068819 32068839 -88215473 + (A)n Simple_repeat Simple_repeat 1 20 0 1 829 269 165 0 56 chr13 32068851 32068941 -88215371 + A-rich Low_complexity Low_complexity 5 89 0 1 829 1788 266 174 53 chr13 32069991 32070640 -88213672 + RCHARR1 DNA MER1_type 3 728 -246 1 829 603 187 39 97 chr13 32070640 32070794 -88213518 - B1_Mus2 SINE Alu 0 147 3 1 829 1788 246 80 72 chr13 32070794 32071035 -88213277 + RCHARR1 DNA MER1_type 729 974 0 1 829 560 245 178 36 chr13 32071140 32071415 -88212897 - MER33 DNA MER1_type -2 322 9 1 829 444 215 25 0 chr13 32071464 32071543 -88212769 - B3A SINE B2 -87 111 31 1 829 342 292 149 9 chr13 32071568 32071675 -88212637 - MLT1J2 LTR MaLR -136 312 191 1 829 238 241 141 24 chr13 32071776 32071861 -88212451 + MTD LTR MaLR 6 100 -319 1 829 975 250 82 15 chr13 32071884 32072152 -88212160 + MTD LTR MaLR 82 367 -52 1 829 24 32 0 0 chr13 32072769 32072800 -88211512 + AT_rich Low_complexity Low_complexity 1 31 0 1 829 246 342 27 0 chr13 32074768 32074841 -88209471 - ID4_ SINE ID -7 76 2 1 829 594 358 54 43 chr13 32074849 32075217 -88209095 - MLT1A LTR MaLR -2 372 1 1 829 262 263 0 0 chr13 32075219 32075276 -88209036 + MLT1D LTR MaLR 446 502 -3 1 829 455 273 33 8 chr13 32075666 32075788 -88208524 - ID_B1 SINE B4 -16 208 84 1 829 1754 5 0 0 chr13 32075861 32076053 -88208259 - B2_Mm1t SINE B2 0 193 2 1 829 261 0 0 0 chr13 32076695 32076724 -88207588 + (A)n Simple_repeat Simple_repeat 1 29 0 1 829 356 236 68 60 chr13 32076921 32077038 -88207274 + PB1D9 SINE Alu 1 118 -2 1 829 419 315 59 0 chr13 32078240 32078392 -88205920 - MIR SINE MIR -88 180 18 1 829 408 20 0 0 chr13 32078826 32078875 -88205437 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 829 21 0 0 0 chr13 32079963 32079984 -88204328 + AT_rich Low_complexity Low_complexity 1 21 0 1 829 441 0 0 0 chr13 32079984 32080033 -88204279 + (TATG)n Simple_repeat Simple_repeat 2 50 0 1 829 716 272 7 0 chr13 32080034 32080170 -88204142 - RSINE1 SINE B4 -14 151 15 1 829 185 0 40 0 chr13 32080172 32080197 -88204115 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 829 947 171 95 27 chr13 32080224 32080446 -88203866 - ORR1D1 LTR MaLR -4 370 134 1 829 233 321 35 26 chr13 32080470 32080585 -88203727 - Lx7 LINE L1 -22 7674 7559 1 829 3254 270 38 7 chr13 32080586 32081562 -88202750 - Lx7 LINE L1 -276 7420 6415 1 829 655 220 28 0 chr13 32081562 32081703 -88202609 - ORR1D1 LTR MaLR -229 145 1 1 829 388 296 11 80 chr13 32081759 32081935 -88202377 - RSINE1 SINE B4 0 165 2 1 829 214 291 24 60 chr13 32082365 32082449 -88201863 + MIRb SINE MIR 119 199 -69 1 829 23 0 0 0 chr13 32083781 32083804 -88200508 + AT_rich Low_complexity Low_complexity 1 23 0 1 829 26 30 0 0 chr13 32086406 32086439 -88197873 + AT_rich Low_complexity Low_complexity 1 33 0 1 829 378 0 0 0 chr13 32086462 32086504 -88197808 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 829 273 316 13 0 chr13 32086515 32086591 -88197721 - RSINE1 SINE B4 -45 120 44 1 829 189 0 0 0 chr13 32087103 32087124 -88197188 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 829 715 311 8 12 chr13 32087215 32087466 -88196846 - Lx9 LINE L1 -323 7321 7072 1 829 24 32 0 0 chr13 32087678 32087709 -88196603 + AT_rich Low_complexity Low_complexity 1 31 0 1 829 231 271 111 9 chr13 32089454 32089562 -88194750 - PB1D7 SINE Alu 0 120 2 1 829 383 329 137 44 chr13 32089593 32090003 -88194309 + L1M5 LINE L1 4863 5310 -836 1 829 351 0 0 0 chr13 32090089 32090128 -88194184 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 829 801 31 0 0 chr13 32092540 32092636 -88191676 + (GGGGA)n Simple_repeat Simple_repeat 2 97 0 1 829 358 58 26 111 chr13 32092638 32092755 -88191557 + GA-rich Low_complexity Low_complexity 3 109 0 1 829 186 174 0 0 chr13 32094713 32094759 -88189553 + A-rich Low_complexity Low_complexity 5 50 0 1 829 212 233 0 0 chr13 32095631 32095674 -88188638 + GA-rich Low_complexity Low_complexity 4 46 0 1 829 579 157 0 0 chr13 32095792 32095900 -88188412 + (TCCA)n Simple_repeat Simple_repeat 3 110 0 1 829 615 304 53 43 chr13 32096208 32096510 -88187802 - Lx8 LINE L1 0 7473 7169 1 829 378 0 0 0 chr13 32096838 32096880 -88187432 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 829 253 47 23 23 chr13 32097007 32097051 -88187261 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 829 325 356 111 22 chr13 32098434 32098569 -88185743 + MIRb SINE MIR 38 184 -84 1 829 27 49 0 0 chr13 32099432 32099473 -88184839 + AT_rich Low_complexity Low_complexity 1 41 0 1 829 25 31 0 0 chr13 32099565 32099597 -88184715 + AT_rich Low_complexity Low_complexity 1 32 0 1 829 324 0 0 0 chr13 32100003 32100039 -88184273 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 829 352 282 41 41 chr13 32101624 32101746 -88182566 - B1F SINE Alu -27 122 1 1 829 446 269 28 0 chr13 32102733 32102841 -88181471 - PB1D7 SINE Alu -9 111 1 1 829 758 228 25 54 chr13 32103062 32103266 -88181046 - B3A SINE B2 0 198 1 1 829 4095 161 15 7 chr13 32104046 32104733 -88179579 - RLTR17 LTR ERVK 0 692 1 1 829 418 327 71 26 chr13 32106191 32106458 -88177854 - HAL1 LINE L1 -1252 1255 977 1 829 1037 79 8 10 chr13 32106807 32106961 -88177351 + B1_Mm SINE Alu 3 147 0 1 829 207 88 0 0 chr13 32106961 32106995 -88177317 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 1 829 1013 295 13 83 chr13 32107876 32108190 -88176122 - B4 SINE B4 0 292 1 1 829 28 61 0 0 chr13 32108321 32108370 -88175942 + AT_rich Low_complexity Low_complexity 1 49 0 1 829 28 71 0 0 chr13 32108597 32108653 -88175659 + AT_rich Low_complexity Low_complexity 1 56 0 1 829 182 266 60 45 chr13 32110894 32110961 -88173351 + L3 LINE CR1 4330 4397 -92 1 829 180 0 0 0 chr13 32111065 32111085 -88173227 + (T)n Simple_repeat Simple_repeat 1 20 0 1 829 212 273 0 18 chr13 32111446 32111502 -88172810 + CT-rich Low_complexity Low_complexity 3 57 0 1 829 22 70 0 0 chr13 32111969 32112012 -88172300 + AT_rich Low_complexity Low_complexity 1 43 0 1 829 404 220 102 78 chr13 32112033 32112054 -88172258 + MT2B LTR ERVL 133 263 -338 1 829 487 252 56 0 chr13 32112054 32112161 -88172151 + B1F2 SINE Alu 1 113 -36 1 829 345 47 0 0 chr13 32112180 32112223 -88172089 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 830 2516 69 63 6 chr13 32113472 32113822 -88170490 - L1Md_F2 LINE L1 0 6582 6213 1 830 268 336 35 17 chr13 32113854 32113969 -88170343 + MIRb SINE MIR 31 147 -121 1 830 317 133 0 32 chr13 32114049 32114111 -88170201 + (TATG)n Simple_repeat Simple_repeat 2 61 0 1 830 474 200 58 125 chr13 32114133 32114253 -88170059 - B1_Mur1 SINE Alu -2 147 36 1 830 764 214 8 8 chr13 32114641 32114773 -88169539 + B1F SINE Alu 8 139 -10 1 830 23 68 0 0 chr13 32116051 32116095 -88168217 + AT_rich Low_complexity Low_complexity 1 44 0 1 830 1800 209 62 3 chr13 32119567 32119955 -88164357 + MTD LTR MaLR 1 411 -8 1 830 192 40 0 0 chr13 32120611 32120636 -88163676 + (T)n Simple_repeat Simple_repeat 1 25 0 1 830 255 173 0 0 chr13 32121643 32121695 -88162617 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 830 785 194 7 20 chr13 32122630 32122777 -88161535 + B1_Mus2 SINE Alu 2 146 -1 1 830 538 251 179 6 chr13 32123300 32123468 -88160844 - B3A SINE B2 -1 197 1 1 830 1205 61 0 0 chr13 32124377 32124524 -88159788 + B1_Mus1 SINE Alu 2 148 0 1 830 212 0 0 35 chr13 32126926 32126955 -88157357 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1 830 266 296 274 17 chr13 32127550 32127725 -88156587 - ID_B1 SINE B4 0 224 5 1 830 861 254 25 0 chr13 32127872 32128073 -88156239 + B3 SINE B2 2 207 -9 1 830 317 125 0 18 chr13 32129234 32129291 -88155021 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 830 346 279 18 71 chr13 32132632 32132744 -88151568 - PB1D7 SINE Alu -3 117 12 1 830 322 320 19 10 chr13 32133024 32133128 -88151184 - ID4_ SINE ID -47 105 1 1 830 5003 61 2 5 chr13 32133186 32133825 -88150487 - L1_Mus1 LINE L1 -1 6566 5930 1 830 225 211 0 0 chr13 32135457 32135509 -88148803 + GA-rich Low_complexity Low_complexity 2 53 0 1 830 422 230 11 0 chr13 32135791 32135878 -88148434 + B4A SINE B4 2 89 -203 1 830 253 340 100 20 chr13 32135878 32135941 -88148371 + B3A SINE B2 2 163 -35 1 830 23 0 0 0 chr13 32136215 32136238 -88148074 + AT_rich Low_complexity Low_complexity 1 23 0 1 830 189 0 0 0 chr13 32136356 32136377 -88147935 + (CAGA)n Simple_repeat Simple_repeat 1 21 0 1 830 22 0 0 0 chr13 32136908 32136930 -88147382 + AT_rich Low_complexity Low_complexity 1 22 0 1 830 333 0 0 0 chr13 32137322 32137359 -88146953 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 830 923 181 0 0 chr13 32137469 32137618 -88146694 - B1_Mur4 SINE Alu 0 150 2 1 830 718 194 28 0 chr13 32138536 32138680 -88145632 + B1_Mur4 SINE Alu 1 148 -2 1 830 218 207 0 17 chr13 32139760 32139819 -88144493 + GA-rich Low_complexity Low_complexity 2 59 0 1 830 387 0 0 0 chr13 32140456 32140499 -88143813 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 830 641 264 36 81 chr13 32141363 32141586 -88142726 - B3 SINE B2 0 216 4 1 830 2398 152 87 13 chr13 32142470 32142942 -88141370 - RMER1A Other Other -4 1026 520 1 830 194 332 166 47 chr13 32143378 32143656 -88140656 - L4 LINE RTE -209 1820 1510 1 830 1062 192 72 235 chr13 32144266 32144708 -88139604 - ORR1D2 LTR MaLR 0 370 1 1 830 21 0 0 0 chr13 32145835 32145856 -88138456 + AT_rich Low_complexity Low_complexity 1 21 0 1 830 219 36 0 0 chr13 32145889 32145917 -88138395 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 830 1005 59 0 56 chr13 32145917 32146061 -88138251 - B1_Mus2 SINE Alu -8 139 4 2 830 282 204 11 22 chr13 32146407 32146497 -88137815 + CT-rich Low_complexity Low_complexity 4 92 0 2 830 360 359 0 10 chr13 32148933 32149037 -88135275 + PB1D7 SINE Alu 6 108 -12 2 830 216 0 0 0 chr13 32149517 32149541 -88134771 + (CAA)n Simple_repeat Simple_repeat 3 26 0 2 830 504 279 21 198 chr13 32150064 32150301 -88134011 - B3A SINE B2 0 216 1 2 830 1116 72 0 0 chr13 32150334 32150473 -88133839 + B1_Mus2 SINE Alu 1 139 -8 2 830 381 187 0 0 chr13 32150493 32150568 -88133744 + GA-rich Low_complexity Low_complexity 2 76 0 2 830 297 0 0 0 chr13 32150788 32150821 -88133491 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 830 422 114 14 0 chr13 32153255 32153325 -88130987 + (GAAAA)n Simple_repeat Simple_repeat 4 74 0 2 830 180 125 0 0 chr13 32153325 32153357 -88130955 + (CGAA)n Simple_repeat Simple_repeat 2 33 0 2 830 211 292 14 14 chr13 32153680 32153753 -88130559 + GA-rich Low_complexity Low_complexity 3 75 0 2 830 357 24 0 0 chr13 32153959 32154001 -88130311 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 830 309 333 0 0 chr13 32155960 32156041 -88128271 - ID4 SINE ID -1 82 2 2 830 47 61 0 0 chr13 32156422 32156504 -88127808 + AT_rich Low_complexity Low_complexity 1 82 0 2 830 558 226 160 6 chr13 32156592 32156748 -88127564 - B3A SINE B2 -16 182 3 2 830 21 0 0 0 chr13 32159063 32159084 -88125228 + AT_rich Low_complexity Low_complexity 1 21 0 2 830 22 35 0 0 chr13 32159616 32159645 -88124667 + AT_rich Low_complexity Low_complexity 1 29 0 2 830 7596 50 3 17 chr13 32159840 32161236 -88123076 - L1Md_F2 LINE L1 0 6582 5206 2 830 198 0 0 0 chr13 32161812 32161834 -88122478 + (CAAA)n Simple_repeat Simple_repeat 4 25 0 2 830 776 298 49 20 chr13 32162484 32162874 -88121438 - L1MB7 LINE L1 0 6184 5784 2 830 2562 104 39 5 chr13 32162880 32163267 -88121045 + MTB_Mm LTR MaLR 1 400 -7 2 830 276 316 6 38 chr13 32163272 32163430 -88120882 - L1MB7 LINE L1 -393 5791 5639 2 830 254 360 29 0 chr13 32163724 32163860 -88120452 - MER5A DNA MER1_type -47 142 3 2 830 410 282 89 42 chr13 32164013 32164272 -88120040 - L1MB7 LINE L1 -912 5234 4964 2 830 218 207 17 0 chr13 32164466 32164524 -88119788 + CT-rich Low_complexity Low_complexity 4 62 0 2 830 463 293 50 28 chr13 32164871 32165050 -88119262 + MER5A DNA MER1_type 4 186 -3 2 830 562 172 143 32 chr13 32166953 32167079 -88117233 + B1_Mur2 SINE Alu 3 142 -7 2 830 195 184 0 0 chr13 32167203 32167241 -88117071 + CT-rich Low_complexity Low_complexity 2 39 0 2 830 253 259 165 0 chr13 32167261 32167346 -88116966 - PB1D10 SINE Alu -9 108 10 2 830 385 312 40 40 chr13 32168112 32168262 -88116050 - MER20 DNA MER1_type -63 156 7 2 830 492 349 68 29 chr13 32168756 32169063 -88115249 + ORR1D2 LTR MaLR 3 321 -49 2 830 255 125 0 0 chr13 32170485 32170525 -88113787 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2 830 373 250 11 11 chr13 32171016 32171105 -88113207 + B4A SINE B4 2 90 -202 2 830 1533 161 4 7 chr13 32171643 32171912 -88112400 + Lx2B LINE L1 6714 6981 -19 2 830 21 0 0 0 chr13 32172319 32172340 -88111972 + AT_rich Low_complexity Low_complexity 1 21 0 2 830 252 0 0 0 chr13 32174159 32174187 -88110125 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 830 504 0 0 0 chr13 32174187 32174242 -88110070 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 830 375 302 169 50 chr13 32174576 32174855 -88109457 + LTR48 LTR ERV1 475 786 -1 2 830 203 152 22 0 chr13 32175081 32175127 -88109185 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 830 733 316 5 17 chr13 32175883 32176094 -88108218 + B3A SINE B2 2 202 -14 2 830 237 108 0 0 chr13 32176098 32176135 -88108177 + (CATA)n Simple_repeat Simple_repeat 4 40 0 2 830 762 291 36 26 chr13 32176735 32176929 -88107383 - B3A SINE B2 -1 197 2 2 830 238 319 0 53 chr13 32177831 32177907 -88106405 + ID4_ SINE ID 3 74 -9 2 830 282 270 0 26 chr13 32179216 32179292 -88105020 + ID4 SINE ID 5 78 -5 2 830 381 254 149 22 chr13 32179611 32179792 -88104520 - B3 SINE B2 -11 205 2 2 830 23 78 0 0 chr13 32179881 32179932 -88104380 + AT_rich Low_complexity Low_complexity 1 51 0 2 830 441 296 47 52 chr13 32179950 32180119 -88104193 + B3A SINE B2 51 214 -2 2 830 679 296 47 16 chr13 32180747 32180939 -88103373 - B3A SINE B2 0 198 1 2 830 362 301 92 54 chr13 32181005 32181135 -88103177 - B3A SINE B2 -21 177 43 2 830 187 256 171 0 chr13 32182356 32182438 -88101874 + MIRb SINE MIR 164 259 -9 2 830 313 227 13 13 chr13 32182533 32182609 -88101703 - BC1_Mm scRNA scRNA -76 76 1 2 830 788 231 61 5 chr13 32183801 32183997 -88100315 + B3 SINE B2 4 210 -6 2 830 4567 100 34 3 chr13 32184607 32185259 -88099053 + Lx LINE L1 5975 6646 -8 2 830 503 128 12 0 chr13 32186446 32186532 -88097780 + (TC)n Simple_repeat Simple_repeat 1 87 0 2 830 205 270 27 13 chr13 32187165 32187240 -88097072 + GA-rich Low_complexity Low_complexity 5 80 0 2 830 204 333 0 11 chr13 32187980 32188068 -88096244 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 2 830 332 261 53 32 chr13 32188105 32188200 -88096112 - B4A SINE B4 -181 111 15 2 830 270 0 0 0 chr13 32188584 32188614 -88095698 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 830 265 178 19 50 chr13 32188645 32188805 -88095507 + (TA)n Simple_repeat Simple_repeat 2 156 0 2 830 205 349 58 0 chr13 32189813 32189899 -88094413 + MIRb SINE MIR 125 215 -53 2 830 377 281 9 19 chr13 32193165 32193270 -88091042 + PB1D10 SINE Alu 5 108 -9 2 830 1103 81 14 0 chr13 32193270 32193417 -88090895 + B1_Mur4 SINE Alu 1 150 0 2 830 25 51 0 0 chr13 32193449 32193488 -88090824 + AT_rich Low_complexity Low_complexity 1 39 0 2 830 240 307 27 0 chr13 32193511 32193586 -88090726 + GA-rich Low_complexity Low_complexity 1 77 0 2 830 290 268 80 23 chr13 32194085 32194173 -88090139 + PB1D10 SINE Alu 16 108 -9 2 830 672 307 161 12 chr13 32194636 32195140 -88089172 - L1MB8 LINE L1 -223 5955 5377 2 830 1000 295 56 17 chr13 32196112 32196471 -88087841 + RCHARR1 DNA MER1_type 126 498 -476 2 830 429 156 31 0 chr13 32196542 32196638 -88087674 + GA-rich Low_complexity Low_complexity 2 100 0 2 830 257 211 125 39 chr13 32196678 32196806 -88087506 + Lx8 LINE L1 7335 7473 0 2 830 972 253 92 62 chr13 32196833 32197152 -88087160 + RCHARR1 DNA MER1_type 482 802 -172 2 830 1789 176 119 3 chr13 32197152 32197505 -88086807 + ORR1B1 LTR MaLR 1 394 0 2 830 972 253 92 62 chr13 32197505 32197589 -88086723 + RCHARR1 DNA MER1_type 803 897 -77 2 830 1230 109 38 16 chr13 32198095 32198281 -88086031 + B2_Mm2 SINE B2 2 191 -4 2 830 261 0 0 0 chr13 32198816 32198845 -88085467 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2 830 26 30 0 0 chr13 32199862 32199895 -88084417 + AT_rich Low_complexity Low_complexity 1 33 0 2 830 1085 184 44 128 chr13 32199946 32200265 -88084047 - Lx2A1 LINE L1 -4 7004 6706 2 830 260 268 56 0 chr13 32201100 32201171 -88083141 - MER20 DNA MER1_type -1 218 144 2 830 219 331 121 29 chr13 32201442 32201616 -88082696 - L2 LINE L2 -1035 2384 2195 2 830 293 282 84 0 chr13 32201770 32201841 -88082471 + ID4_ SINE ID 1 77 -6 2 830 3393 66 30 22 chr13 32202305 32202768 -88081544 + L1Md_F2 LINE L1 6115 6581 -1 2 830 241 226 0 0 chr13 32203121 32203189 -88081123 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 830 7589 32 1 0 chr13 32204959 32205856 -88078456 + L1Md_A LINE L1 5685 6582 0 2 830 554 299 20 41 chr13 32206273 32206468 -88077844 + ORR1E LTR MaLR 1 191 -168 2 830 343 175 49 24 chr13 32206520 32206602 -88077710 + ORR1E LTR MaLR 296 379 0 2 830 249 268 55 27 chr13 32207185 32207258 -88077054 - ID SINE ID -142 82 8 2 830 375 249 121 55 chr13 32207361 32207534 -88076778 - MIRb SINE MIR -41 227 50 2 830 4955 216 57 2 chr13 32207915 32209093 -88075219 + Lx9 LINE L1 6328 7569 -75 2 830 235 312 26 13 chr13 32209167 32209245 -88075067 + ID4_ SINE ID 2 80 -3 2 830 201 74 0 0 chr13 32209811 32209838 -88074474 + (GAAAA)n Simple_repeat Simple_repeat 5 31 0 2 830 21 0 0 0 chr13 32210607 32210628 -88073684 + AT_rich Low_complexity Low_complexity 1 21 0 2 830 805 223 7 0 chr13 32211201 32211349 -88072963 - B1_Mur1 SINE Alu 0 149 1 2 830 1671 203 72 8 chr13 32211384 32211747 -88072565 - RMER1B Other Other -27 1039 654 2 830 374 331 161 29 chr13 32211797 32211971 -88072341 - MER20 DNA MER1_type -5 214 18 2 830 234 0 0 0 chr13 32212017 32212043 -88072269 + (A)n Simple_repeat Simple_repeat 1 26 0 2 830 332 238 12 70 chr13 32213272 32213358 -88070954 - ID4 SINE ID -2 81 1 2 830 22 35 0 0 chr13 32214145 32214174 -88070138 + AT_rich Low_complexity Low_complexity 1 29 0 2 830 275 292 42 73 chr13 32214230 32214326 -88069986 + MT2B2 LTR ERVL 152 244 -340 2 830 423 284 39 0 chr13 32214249 32214351 -88069961 + B1F1 SINE Alu 10 115 -34 2 830 24 32 0 0 chr13 32214532 32214563 -88069749 + AT_rich Low_complexity Low_complexity 1 31 0 2 830 22 56 0 0 chr13 32214817 32214853 -88069459 + AT_rich Low_complexity Low_complexity 1 36 0 2 830 189 0 0 0 chr13 32215137 32215158 -88069154 + (TA)n Simple_repeat Simple_repeat 1 21 0 2 830 371 225 34 68 chr13 32215158 32215306 -88069006 - L1MCa LINE L1 -4549 1959 1817 2 830 351 0 0 0 chr13 32216470 32216509 -88067803 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 830 243 0 0 0 chr13 32216509 32216535 -88067777 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 830 201 210 0 0 chr13 32216618 32216680 -88067632 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 830 283 357 71 0 chr13 32216697 32216795 -88067517 - RSINE1 SINE B4 -2 163 59 3 830 822 116 14 7 chr13 32217440 32217588 -88066724 + (GA)n Simple_repeat Simple_repeat 2 150 0 3 830 1878 102 22 4 chr13 32218032 32218309 -88066003 + Lx3C LINE L1 6686 6967 -9 3 830 22 56 0 0 chr13 32218314 32218350 -88065962 + AT_rich Low_complexity Low_complexity 1 36 0 3 830 285 29 0 0 chr13 32219238 32219272 -88065040 + (TC)n Simple_repeat Simple_repeat 1 34 0 3 830 495 45 0 0 chr13 32219272 32219337 -88064975 + (CA)n Simple_repeat Simple_repeat 1 66 0 3 830 1016 253 88 24 chr13 32220569 32220926 -88063386 - MTC LTR MaLR -2 394 13 3 830 207 298 162 26 chr13 32221055 32221172 -88063140 + L4 LINE RTE 276 408 -1621 3 830 333 0 0 0 chr13 32221377 32221414 -88062898 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 830 600 303 121 47 chr13 32221430 32221686 -88062626 - B4A SINE B4 -10 282 8 3 830 434 250 90 15 chr13 32221698 32221832 -88062480 - B1_Mur1 SINE Alu -3 146 3 3 830 774 269 18 22 chr13 32221901 32222178 -88062134 - L1MB7 LINE L1 -36 6148 5873 3 830 428 307 85 36 chr13 32222179 32222487 -88061825 - L1MB7 LINE L1 -517 5667 5352 3 830 372 216 61 26 chr13 32222512 32222626 -88061686 - Lx2B LINE L1 -14 6986 6869 3 830 360 239 107 0 chr13 32222997 32223138 -88061174 - L1MB7 LINE L1 -1125 5021 4868 3 830 21 0 0 0 chr13 32223666 32223687 -88060625 + AT_rich Low_complexity Low_complexity 1 21 0 3 830 691 323 32 14 chr13 32223786 32224006 -88060306 + MER58A DNA MER1_type 1 224 0 3 830 909 181 131 0 chr13 32224983 32225182 -88059130 - URR1A DNA MER1_type 0 226 2 3 830 854 256 65 19 chr13 32226025 32226288 -88058024 + B4A SINE B4 6 280 -12 3 830 416 350 0 0 chr13 32227962 32228065 -88056247 + PB1D10 SINE Alu 2 104 -13 3 830 1316 181 20 52 chr13 32228609 32228953 -88055359 + RMER10A LTR ERVL 110 442 0 3 830 474 65 0 0 chr13 32229749 32229811 -88054501 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 830 257 317 36 24 chr13 32229842 32229926 -88054386 - B4 SINE B4 -114 178 94 3 830 380 198 123 0 chr13 32231652 32231733 -88052579 - B1_Mur2 SINE Alu -50 99 9 3 830 723 98 0 0 chr13 32232570 32232693 -88051619 + (GA)n Simple_repeat Simple_repeat 2 124 0 3 830 269 381 149 6 chr13 32234198 32234359 -88049953 - MIR SINE MIR -21 247 57 3 830 225 0 0 0 chr13 32235286 32235311 -88049001 + (A)n Simple_repeat Simple_repeat 1 25 0 3 830 21 0 0 0 chr13 32235916 32235937 -88048375 + AT_rich Low_complexity Low_complexity 1 21 0 3 830 698 280 6 13 chr13 32236448 32236607 -88047705 + B3A SINE B2 3 160 -38 3 830 258 242 32 16 chr13 32236666 32236729 -88047583 + B3A SINE B2 2 65 -133 3 830 204 143 0 0 chr13 32236746 32236788 -88047524 + (A)n Simple_repeat Simple_repeat 1 42 0 3 830 781 277 73 0 chr13 32237460 32237666 -88046646 + ID_B1 SINE B4 4 224 0 3 830 421 235 215 20 chr13 32238229 32238429 -88045883 - L1MB8 LINE L1 -124 6054 5816 3 830 363 125 0 0 chr13 32238430 32238486 -88045826 + RLTR23 LTR ERV1 2 57 -373 3 830 1385 134 0 36 chr13 32238488 32238712 -88045600 + RLTR23 LTR ERV1 215 430 0 3 830 278 357 63 11 chr13 32238811 32239071 -88045241 - L1MB8 LINE L1 -472 5706 5435 3 830 189 0 0 0 chr13 32239400 32239421 -88044891 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 830 1657 207 99 3 chr13 32240194 32240576 -88043736 + MTD LTR MaLR 1 419 0 3 830 229 288 25 0 chr13 32240799 32240879 -88043433 + ID4 SINE ID 2 83 0 3 830 4080 40 32 2 chr13 32241273 32241776 -88042536 + L1Md_F3 LINE L1 6066 6583 -1 3 830 524 355 38 57 chr13 32241990 32242307 -88042005 - MamRep434 DNA TcMar -112 314 4 3 830 259 179 0 160 chr13 32243488 32243588 -88040724 - Lx7 LINE L1 -320 7376 7293 3 103 965 177 117 65 chr13 32243567 32243857 -88040455 + Lx7 LINE L1 7389 7693 -3 3 831 348 83 0 0 chr13 32243872 32243920 -88040392 + (GGA)n Simple_repeat Simple_repeat 2 49 0 3 831 338 196 0 11 chr13 32245120 32245213 -88039099 + (TA)n Simple_repeat Simple_repeat 1 92 0 3 831 233 57 29 0 chr13 32245214 32245249 -88039063 + (CCTA)n Simple_repeat Simple_repeat 2 37 0 3 831 23 0 0 0 chr13 32245767 32245790 -88038522 + AT_rich Low_complexity Low_complexity 1 23 0 3 831 608 136 9 26 chr13 32245927 32246040 -88038272 - B1_Mus1 SINE Alu 0 148 38 3 831 745 259 45 11 chr13 32246140 32246316 -88037996 - B3A SINE B2 -14 184 3 3 831 588 308 114 9 chr13 32246316 32246523 -88037789 - B4 SINE B4 -62 230 2 3 831 369 289 11 11 chr13 32246777 32246868 -88037444 + B4A SINE B4 1 91 -201 3 831 261 180 0 0 chr13 32247005 32247055 -88037257 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 831 1015 64 0 28 chr13 32247055 32247185 -88037127 + B1_Mm SINE Alu 8 137 -10 3 831 183 42 0 0 chr13 32247185 32247209 -88037103 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 831 1015 64 0 28 chr13 32247209 32247222 -88037090 + B1_Mm SINE Alu 138 147 0 3 831 319 73 0 35 chr13 32247222 32247279 -88037033 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 3 831 2283 70 4 189 chr13 32247518 32247993 -88036319 - L1_Mur1 LINE L1 -967 4919 4533 3 831 400 290 208 21 chr13 32248005 32248576 -88035736 + L1MC LINE L1 2295 2972 -3174 3 831 925 249 15 0 chr13 32248580 32248777 -88035535 + B3 SINE B2 1 200 -16 3 831 2256 88 29 35 chr13 32248836 32249179 -88035133 + L1Md_F2 LINE L1 6240 6580 -2 3 831 35 0 0 0 chr13 32249237 32249272 -88035040 + AT_rich Low_complexity Low_complexity 1 35 0 3 831 189 107 0 0 chr13 32250518 32250546 -88033766 + (TGGA)n Simple_repeat Simple_repeat 4 31 0 3 831 26 30 0 0 chr13 32250776 32250809 -88033503 + AT_rich Low_complexity Low_complexity 1 33 0 3 831 201 94 0 0 chr13 32250823 32250855 -88033457 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 831 449 333 77 0 chr13 32250956 32251124 -88033188 + B3A SINE B2 2 182 -16 3 831 1078 110 0 0 chr13 32251629 32251775 -88032537 + B1_Mus2 SINE Alu 2 147 0 3 831 205 178 0 0 chr13 32251775 32251820 -88032492 + A-rich Low_complexity Low_complexity 1 45 0 3 831 3873 147 58 16 chr13 32251902 32252020 -88032292 - RMER1A Other Other 0 1030 880 3 831 198 0 0 0 chr13 32252020 32252042 -88032270 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 831 3873 147 58 16 chr13 32252042 32252601 -88031711 - RMER1A Other Other -151 879 325 3 831 191 284 123 0 chr13 32253028 32253109 -88031203 - L4 LINE RTE -248 1781 1691 3 831 750 199 7 40 chr13 32254224 32254376 -88029936 - B1_Mur3 SINE Alu -2 147 1 3 831 911 242 24 9 chr13 32254632 32254845 -88029467 - B3 SINE B2 0 216 1 3 831 1115 307 33 40 chr13 32254874 32255295 -88029017 + Lx9 LINE L1 7000 7417 -227 3 831 1225 126 97 0 chr13 32255772 32255978 -88028334 + URR1A DNA MER1_type 1 226 0 3 831 1970 264 69 53 chr13 32255983 32256664 -88027648 + Lx8 LINE L1 6322 7013 -460 3 831 379 335 75 15 chr13 32256692 32256892 -88027420 + Lx8 LINE L1 7165 7376 -97 3 831 28 48 0 0 chr13 32257354 32257396 -88026916 + AT_rich Low_complexity Low_complexity 1 42 0 3 831 34 42 0 0 chr13 32258018 32258066 -88026246 + AT_rich Low_complexity Low_complexity 1 48 0 3 831 414 248 58 0 chr13 32258222 32258354 -88025958 + B1_Mus1 SINE Alu 1 148 -1 3 831 253 329 0 0 chr13 32259453 32259532 -88024780 + RSINE1 SINE B4 43 121 -44 3 831 346 250 25 0 chr13 32262833 32262913 -88021399 - MER102a DNA MER1_type -3 327 246 3 831 273 233 130 22 chr13 32262925 32263017 -88021295 - MER5A1 DNA MER1_type -14 152 51 3 831 650 61 5 204 chr13 32265335 32265521 -88018791 + RMER17B LTR ERVK 312 460 -498 3 831 188 400 0 23 chr13 32266286 32266373 -88017939 - MER5A DNA MER1_type -2 187 103 3 831 226 115 19 19 chr13 32266399 32266452 -88017860 + T-rich Low_complexity Low_complexity 4 56 0 3 831 570 241 14 42 chr13 32266702 32266845 -88017467 + B1F SINE Alu 3 141 -8 3 831 1580 240 89 11 chr13 32266948 32267306 -88017006 + MTD LTR MaLR 1 386 -33 3 831 9589 63 25 64 chr13 32267340 32268904 -88015408 + Lx3_Mus LINE L1 5522 7001 -8 3 831 198 0 0 0 chr13 32269716 32269738 -88014574 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 3 831 405 0 0 0 chr13 32270963 32271008 -88013304 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 831 22 0 0 0 chr13 32272236 32272258 -88012054 + AT_rich Low_complexity Low_complexity 1 22 0 3 831 295 259 94 0 chr13 32272573 32272676 -88011636 + MLT1A1 LTR MaLR 1 112 -262 3 831 317 316 87 56 chr13 32272863 32273024 -88011288 + MLT1A1 LTR MaLR 239 404 -4 3 831 2686 180 54 36 chr13 32273084 32273965 -88010347 + RMER6A LTR ERVK 30 756 0 3 831 21 0 0 0 chr13 32273973 32273994 -88010318 + AT_rich Low_complexity Low_complexity 1 21 0 3 831 301 273 0 13 chr13 32274016 32274094 -88010218 + MER34 LTR ERV1 393 469 -73 3 831 222 192 0 0 chr13 32274322 32274374 -88009938 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 831 600 306 125 29 chr13 32275538 32275881 -88008431 - Lx8 LINE L1 -827 6646 6271 3 831 1688 293 123 21 chr13 32275878 32276628 -88007684 + Lx8 LINE L1 6645 7470 -3 3 831 8891 60 8 9 chr13 32276618 32277181 -88007131 + L1Md_F2 LINE L1 4731 5293 -590 3 831 7331 38 3 0 chr13 32277181 32278066 -88006246 + L1Md_F2 LINE L1 5693 6580 -2 3 831 6346 54 0 12 chr13 32278066 32278358 -88005954 + L1Md_F2 LINE L1 5294 5585 -298 3 831 7922 53 1 16 chr13 32278359 32279368 -88004944 + L1Md_F2 LINE L1 5587 6580 -2 3 831 207 0 0 0 chr13 32279381 32279404 -88004908 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 831 1567 127 17 17 chr13 32279405 32279693 -88004619 - Lx2A1 LINE L1 -15 6993 6706 3 831 759 238 25 0 chr13 32279729 32279889 -88004423 + B3 SINE B2 7 170 -46 3 831 303 304 130 9 chr13 32279870 32280081 -88004231 - MER2 DNA MER2_type -100 245 2 3 831 349 258 110 26 chr13 32282097 32282288 -88002024 - Charlie4 DNA MER1_type -18 1943 1737 3 831 330 26 0 0 chr13 32283214 32283253 -88001059 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 831 1056 81 0 0 chr13 32283254 32283390 -88000922 - B1_Mus1 SINE Alu -12 136 1 3 831 2479 106 98 18 chr13 32283695 32284135 -88000177 - IAPLTR2_Mm LTR ERVK 0 475 1 3 831 21 71 0 0 chr13 32284443 32284485 -87999827 + AT_rich Low_complexity Low_complexity 1 42 0 4 831 1014 180 52 20 chr13 32284552 32284781 -87999531 + ORR1C2 LTR MaLR 2 227 -140 4 831 996 184 32 0 chr13 32284831 32285021 -87999291 + ORR1C2 LTR MaLR 175 370 -14 4 831 2924 41 0 62 chr13 32286396 32286785 -87997527 + RLTR10B2 LTR ERVK 1 365 0 4 831 21 0 0 0 chr13 32288421 32288442 -87995870 + AT_rich Low_complexity Low_complexity 1 21 0 4 831 29 0 0 0 chr13 32288649 32288678 -87995634 + AT_rich Low_complexity Low_complexity 1 29 0 4 831 249 139 0 0 chr13 32290006 32290049 -87994263 + (CACG)n Simple_repeat Simple_repeat 1 43 0 4 831 921 117 129 6 chr13 32291400 32291563 -87992749 + B2_Mm2 SINE B2 3 185 -10 4 831 277 173 19 19 chr13 32292333 32292386 -87991926 + ID_B1 SINE B4 172 224 0 4 831 21 57 0 0 chr13 32292398 32292433 -87991879 + AT_rich Low_complexity Low_complexity 1 35 0 4 831 423 98 0 0 chr13 32292532 32292593 -87991719 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 4 831 233 105 0 26 chr13 32293778 32293817 -87990495 - PB1D10 SINE Alu 0 117 80 4 831 378 0 0 0 chr13 32294104 32294146 -87990166 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 831 1441 90 5 0 chr13 32295434 32295634 -87988678 + L1_Mus2 LINE L1 6365 6565 -1 4 831 204 149 0 0 chr13 32295637 32295684 -87988628 + (A)n Simple_repeat Simple_repeat 1 47 0 4 831 315 0 0 0 chr13 32295898 32295933 -87988379 + (GGGGA)n Simple_repeat Simple_repeat 2 36 0 4 831 264 284 15 0 chr13 32297066 32297133 -87987179 + Kanga1 DNA Tc2 329 396 -1349 4 831 218 375 12 0 chr13 32297147 32297227 -87987085 + ID SINE ID 2 82 -142 4 831 368 332 127 18 chr13 32297744 32297950 -87986362 + L1M5 LINE L1 5210 5436 -737 4 831 23 0 0 0 chr13 32298121 32298144 -87986168 + AT_rich Low_complexity Low_complexity 1 23 0 4 831 423 0 0 0 chr13 32298675 32298722 -87985590 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 831 299 25 25 0 chr13 32298722 32298761 -87985551 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 831 221 345 0 142 chr13 32299558 32299727 -87984585 + MIR3 SINE MIR 14 158 -50 4 831 25 75 0 0 chr13 32299918 32299971 -87984341 + AT_rich Low_complexity Low_complexity 1 53 0 4 831 23 0 0 0 chr13 32300386 32300409 -87983903 + AT_rich Low_complexity Low_complexity 1 23 0 4 831 210 309 132 0 chr13 32300545 32300613 -87983699 + ID2 SINE ID 2 78 -5 4 831 197 361 43 61 chr13 32301643 32301758 -87982554 - MIRm SINE MIR -64 212 100 4 831 984 30 38 0 chr13 32303291 32303422 -87980890 + L1Md_A LINE L1 6445 6580 -2 4 831 25 75 0 0 chr13 32303996 32304049 -87980263 + AT_rich Low_complexity Low_complexity 1 53 0 4 831 28 48 0 0 chr13 32304507 32304549 -87979763 + AT_rich Low_complexity Low_complexity 1 42 0 4 831 21 0 0 0 chr13 32305417 32305438 -87978874 + AT_rich Low_complexity Low_complexity 1 21 0 4 831 252 0 132 0 chr13 32306410 32306478 -87977834 + (TA)n Simple_repeat Simple_repeat 2 78 0 4 831 800 47 9 0 chr13 32307279 32307385 -87976927 + B1_Mus2 SINE Alu 41 147 0 4 831 209 57 0 28 chr13 32307387 32307423 -87976889 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 831 22 0 0 0 chr13 32307686 32307708 -87976604 + AT_rich Low_complexity Low_complexity 1 22 0 4 831 225 0 0 0 chr13 32307908 32307933 -87976379 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 4 831 397 325 40 0 chr13 32313000 32313126 -87971186 + MER5A DNA MER1_type 2 132 -57 4 831 1659 78 20 12 chr13 32313260 32313506 -87970806 - L1Md_F2 LINE L1 0 6582 6335 4 831 385 290 43 43 chr13 32314660 32314822 -87969490 + RSINE1 SINE B4 4 165 0 4 831 240 35 0 0 chr13 32315724 32315753 -87968559 + (TAG)n Simple_repeat Simple_repeat 1 29 0 4 831 796 276 61 0 chr13 32315788 32315969 -87968343 - B3 SINE B2 -8 208 17 4 831 304 0 87 0 chr13 32316818 32316864 -87967448 + L1Md_T LINE L1 6531 6580 -2 4 831 27 29 0 0 chr13 32317803 32317837 -87966475 + AT_rich Low_complexity Low_complexity 1 34 0 4 831 22 56 0 0 chr13 32317947 32317983 -87966329 + AT_rich Low_complexity Low_complexity 1 36 0 4 831 195 316 114 21 chr13 32318272 32318441 -87965871 + MIRc SINE MIR 47 234 -34 4 831 22 35 0 0 chr13 32318550 32318579 -87965733 + AT_rich Low_complexity Low_complexity 1 29 0 4 831 33 25 0 0 chr13 32318659 32318699 -87965613 + AT_rich Low_complexity Low_complexity 1 40 0 4 831 22 56 0 0 chr13 32319183 32319219 -87965093 + AT_rich Low_complexity Low_complexity 1 36 0 4 831 279 71 0 0 chr13 32322161 32322203 -87962109 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 4 831 234 324 27 91 chr13 32322569 32322683 -87961629 - MIRb SINE MIR -28 240 136 4 831 225 0 0 0 chr13 32322683 32322708 -87961604 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 831 234 335 28 156 chr13 32322708 32322798 -87961514 - MIRb SINE MIR -132 136 62 4 831 274 222 0 18 chr13 32323051 32323106 -87961206 + B1F1 SINE Alu 1 54 -95 4 831 224 203 82 33 chr13 32323054 32323115 -87961197 + ID_B1 SINE B4 85 148 -76 4 831 695 299 103 4 chr13 32323201 32323433 -87960879 + MER2 DNA MER2_type 91 345 0 4 831 368 315 90 14 chr13 32323956 32324101 -87960211 + RSINE1 SINE B4 4 159 -6 4 831 241 329 66 66 chr13 32326469 32326560 -87957752 + MIRb SINE MIR 5 95 -181 4 831 1016 41 0 171 chr13 32326882 32327058 -87957254 - B1_Mm SINE Alu 0 147 2 4 831 195 375 28 0 chr13 32328937 32329009 -87955303 - MIR SINE MIR -90 118 45 4 831 308 279 78 35 chr13 32329897 32330038 -87954274 - RMER30 DNA MER1_type -55 147 1 4 831 344 237 20 51 chr13 32330129 32330227 -87954085 + B1F SINE Alu 53 147 -2 4 831 3977 38 0 0 chr13 32330490 32330961 -87953351 + L1Md_F2 LINE L1 6098 6568 -14 4 831 285 0 67 0 chr13 32330962 32331007 -87953305 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 831 325 324 26 0 chr13 32331007 32331122 -87953190 - MIR3 SINE MIR -32 176 65 4 831 255 31 0 0 chr13 32331128 32331160 -87953152 + (TAG)n Simple_repeat Simple_repeat 3 34 0 4 831 227 289 0 0 chr13 32331164 32331216 -87953096 + L1MD2 LINE L1 433 484 -6063 4 831 1013 82 48 0 chr13 32331286 32331433 -87952879 + L1Md_F2 LINE L1 6410 6563 -19 4 831 971 250 132 42 chr13 32332207 32332541 -87951771 + Lx9 LINE L1 7124 7496 -148 4 831 333 47 0 0 chr13 32332541 32332584 -87951728 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 831 971 250 132 42 chr13 32332584 32332725 -87951587 + Lx9 LINE L1 7497 7642 -2 4 831 25 51 0 0 chr13 32333102 32333141 -87951171 + AT_rich Low_complexity Low_complexity 1 39 0 4 831 181 311 89 32 chr13 32333687 32333810 -87950502 - MIR SINE MIR -44 218 89 4 831 637 257 65 18 chr13 32333818 32333988 -87950324 + MTD LTR MaLR 1 178 -241 4 831 24 53 0 0 chr13 32334900 32334938 -87949374 + AT_rich Low_complexity Low_complexity 1 38 0 4 831 2614 82 32 34 chr13 32335589 32335968 -87948344 + Lx3A LINE L1 6597 6974 -7 4 831 189 0 0 0 chr13 32335999 32336020 -87948292 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 831 40 49 0 0 chr13 32336548 32336609 -87947703 + AT_rich Low_complexity Low_complexity 1 61 0 4 831 566 306 54 0 chr13 32336749 32336896 -87947416 + RSINE1 SINE B4 3 157 -8 4 831 14795 58 2 1 chr13 32337176 32339057 -87945255 - L1Md_F2 LINE L1 -326 5557 3674 4 831 7552 51 8 35 chr13 32339070 32340081 -87944231 + L1Md_F2 LINE L1 5587 6570 -12 4 831 302 45 0 22 chr13 32340160 32340205 -87944107 + (GTTTG)n Simple_repeat Simple_repeat 1 44 0 4 831 309 159 79 0 chr13 32340211 32340274 -87944038 - Charlie5 DNA MER1_type -437 2187 2120 4 831 790 270 16 11 chr13 32340276 32340463 -87943849 + B3 SINE B2 1 188 -28 4 831 1061 292 108 98 chr13 32340445 32341694 -87942618 - Charlie5 DNA MER1_type -502 2122 862 4 831 6115 68 8 3 chr13 32341698 32342791 -87941521 - L1_Mus2 LINE L1 -442 6124 5029 4 831 24 77 0 0 chr13 32342913 32342965 -87941347 + AT_rich Low_complexity Low_complexity 1 52 0 4 831 328 326 26 77 chr13 32343007 32343163 -87941149 - RSINE1 SINE B4 -15 150 3 4 831 25 31 0 0 chr13 32343242 32343274 -87941038 + AT_rich Low_complexity Low_complexity 1 32 0 4 831 1734 198 77 18 chr13 32343927 32344431 -87939881 + RMER4B LTR ERVK 17 585 0 4 831 225 0 0 0 chr13 32345452 32345477 -87938835 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 831 216 308 11 32 chr13 32345486 32345580 -87938732 + C-rich Low_complexity Low_complexity 5 96 0 4 831 214 125 24 24 chr13 32345826 32345867 -87938445 + GA-rich Low_complexity Low_complexity 4 44 0 4 831 1313 257 86 47 chr13 32345908 32346337 -87937975 + MLT1C LTR MaLR 20 465 -2 4 831 449 338 44 67 chr13 32347938 32348383 -87935929 - MER74B LTR ERVL -73 549 67 4 831 225 0 0 0 chr13 32349281 32349306 -87935006 + (T)n Simple_repeat Simple_repeat 1 25 0 4 831 1026 82 0 26 chr13 32349804 32349955 -87934357 + B1_Mus1 SINE Alu 2 148 0 4 831 252 59 0 0 chr13 32351024 32351058 -87933254 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 831 713 245 45 50 chr13 32353783 32353981 -87930331 + B3A SINE B2 1 197 -1 4 831 339 25 0 0 chr13 32354497 32354537 -87929775 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 831 25 75 0 0 chr13 32354579 32354632 -87929680 + AT_rich Low_complexity Low_complexity 1 53 0 4 831 878 165 41 31 chr13 32355268 32355462 -87928850 + B3A SINE B2 3 198 0 4 831 299 312 50 50 chr13 32356113 32356214 -87928098 - PB1D10 SINE Alu -11 106 6 4 831 1113 190 18 5 chr13 32357514 32357736 -87926576 - URR1B DNA MER1_type 0 225 1 4 831 575 44 0 42 chr13 32358015 32358110 -87926202 + (TCCC)n Simple_repeat Simple_repeat 1 91 0 4 831 363 23 0 0 chr13 32359810 32359854 -87924458 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 831 22 0 0 0 chr13 32360631 32360653 -87923659 + AT_rich Low_complexity Low_complexity 1 22 0 5 831 231 36 0 0 chr13 32361031 32361059 -87923253 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 5 831 317 316 20 10 chr13 32361812 32361911 -87922401 + Charlie22a DNA MER1_type 1 100 -391 5 831 332 295 54 0 chr13 32362033 32362145 -87922167 + Charlie22a DNA MER1_type 315 432 -59 5 831 1658 112 16 0 chr13 32363655 32363913 -87920399 + L1_Mus3 LINE L1 6370 6631 -7 5 831 22 70 0 0 chr13 32364049 32364092 -87920220 + AT_rich Low_complexity Low_complexity 1 43 0 5 831 2938 23 2 152 chr13 32364217 32364676 -87919636 + RLTR10 LTR ERVK 1 390 0 5 831 744 235 29 12 chr13 32364865 32365037 -87919275 + B3A SINE B2 6 180 -18 5 831 3197 166 93 33 chr13 32365949 32366468 -87917844 + RMER1B Other Other 372 921 -145 5 831 264 30 0 0 chr13 32366468 32366501 -87917811 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 5 831 3197 166 93 33 chr13 32366501 32366623 -87917689 + RMER1B Other Other 922 1052 -14 5 831 599 270 22 44 chr13 32367670 32367852 -87916460 + B3A SINE B2 8 185 -13 5 831 24 53 0 0 chr13 32368089 32368127 -87916185 + AT_rich Low_complexity Low_complexity 1 38 0 5 831 30 59 0 0 chr13 32368313 32368364 -87915948 + AT_rich Low_complexity Low_complexity 1 51 0 5 831 306 324 58 70 chr13 32368875 32368897 -87915415 + B4 SINE B4 69 220 -70 5 831 643 212 38 0 chr13 32368897 32369029 -87915283 + B1_Mur2 SINE Alu 7 143 -6 5 831 207 0 0 0 chr13 32369031 32369054 -87915258 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 831 21 0 0 0 chr13 32369145 32369166 -87915146 + AT_rich Low_complexity Low_complexity 1 21 0 5 831 225 288 15 15 chr13 32369885 32369952 -87914360 + (CACG)n Simple_repeat Simple_repeat 3 69 0 5 831 8723 59 12 0 chr13 32370104 32371210 -87913102 + L1Md_F2 LINE L1 4467 5585 -298 5 831 8070 40 14 1 chr13 32371211 32372194 -87912118 + L1Md_F2 LINE L1 5587 6582 0 5 831 5487 97 9 15 chr13 32372191 32372986 -87911326 + L1Md_F2 LINE L1 5785 6574 -8 5 831 22 35 0 0 chr13 32373432 32373461 -87910851 + AT_rich Low_complexity Low_complexity 1 29 0 5 831 1529 251 23 44 chr13 32373582 32373969 -87910343 - MTE2b LTR MaLR 0 379 1 5 831 1099 68 0 7 chr13 32374540 32374674 -87909638 + B1_Mus2 SINE Alu 1 134 -13 5 831 180 0 0 0 chr13 32374674 32374694 -87909618 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 5 831 1099 68 0 7 chr13 32374694 32374707 -87909605 + B1_Mus2 SINE Alu 135 146 -1 5 831 221 180 20 0 chr13 32374707 32374757 -87909555 + GA-rich Low_complexity Low_complexity 1 51 0 5 832 259 358 18 0 chr13 32374845 32374954 -87909358 + GA-rich Low_complexity Low_complexity 2 112 0 5 832 667 206 208 40 chr13 32375064 32375290 -87909022 + B4A SINE B4 29 292 0 5 832 1396 129 38 0 chr13 32375578 32375787 -87908525 + URR1B DNA MER1_type 9 225 0 5 832 24 0 0 0 chr13 32376336 32376360 -87907952 + AT_rich Low_complexity Low_complexity 1 24 0 5 832 26 82 0 0 chr13 32376425 32376486 -87907826 + AT_rich Low_complexity Low_complexity 1 61 0 5 832 1097 82 0 13 chr13 32376497 32376646 -87907666 + B1_Mm SINE Alu 1 147 0 5 832 203 162 0 0 chr13 32376646 32376683 -87907629 + A-rich Low_complexity Low_complexity 6 42 0 5 832 294 29 0 0 chr13 32377174 32377209 -87907103 + (T)n Simple_repeat Simple_repeat 1 35 0 5 832 1142 55 7 0 chr13 32377209 32377355 -87906957 - B1_Mm SINE Alu 0 147 1 5 832 1744 86 98 29 chr13 32377472 32377749 -87906563 + L1Md_F2 LINE L1 6287 6582 0 5 832 381 275 0 32 chr13 32377836 32377930 -87906382 + MTE2b-int LTR MaLR 240 330 -1250 5 832 28 71 0 0 chr13 32378094 32378150 -87906162 + AT_rich Low_complexity Low_complexity 1 56 0 5 832 281 154 0 0 chr13 32378158 32378210 -87906102 + Lx9 LINE L1 7592 7643 -1 5 832 3111 275 145 35 chr13 32378219 32379351 -87904961 + MTE2b-int LTR MaLR 313 1569 -11 5 832 398 291 120 0 chr13 32379369 32379486 -87904826 + MTE2b LTR MaLR 5 135 -244 5 832 544 297 131 15 chr13 32379512 32379772 -87904540 + B4A SINE B4 1 290 -2 5 832 25 22 0 43 chr13 32380283 32380311 -87904001 + AT_rich Low_complexity Low_complexity 1 27 0 5 832 1055 103 7 0 chr13 32380311 32380457 -87903855 - B1_Mus1 SINE Alu -1 147 1 5 832 25 22 0 43 chr13 32380457 32380475 -87903837 + AT_rich Low_complexity Low_complexity 1 18 0 5 832 184 231 13 13 chr13 32380683 32380762 -87903550 + (TA)n Simple_repeat Simple_repeat 1 79 0 5 832 1809 168 15 102 chr13 32381851 32382030 -87902282 - ORR1D1 LTR MaLR 0 374 207 5 832 468 35 0 0 chr13 32382030 32382088 -87902224 + (TTTTG)n Simple_repeat Simple_repeat 2 59 0 5 832 1021 88 15 0 chr13 32382089 32382225 -87902087 - B1_Mus1 SINE Alu -10 138 1 5 832 1076 146 46 10 chr13 32382233 32382427 -87901885 - Lx2 LINE L1 0 6997 6797 5 832 1809 168 15 102 chr13 32382427 32382586 -87901726 - ORR1D1 LTR MaLR -168 206 60 5 832 2789 118 46 7 chr13 32382586 32383022 -87901290 - RLTR11B LTR ERVK 0 453 1 5 832 1809 168 15 102 chr13 32383022 32383081 -87901231 - ORR1D1 LTR MaLR -315 59 1 5 832 413 203 66 92 chr13 32383531 32383683 -87900629 + B1_Mus1 SINE Alu 1 148 0 5 832 378 311 58 119 chr13 32383986 32384296 -87900016 - B4 SINE B4 0 292 2 5 832 504 163 34 13 chr13 32385799 32385948 -87898364 + GA-rich Low_complexity Low_complexity 4 155 0 5 832 210 174 0 0 chr13 32385963 32386009 -87898303 + GA-rich Low_complexity Low_complexity 3 48 0 5 832 272 351 70 0 chr13 32386499 32386613 -87897699 + MER20B DNA MER1_type 34 155 -628 5 832 1080 208 10 0 chr13 32386808 32387010 -87897302 + B3 SINE B2 3 206 -10 5 832 472 193 0 0 chr13 32387234 32387317 -87896995 + BC1_Mm scRNA scRNA 1 83 -69 5 832 198 0 0 0 chr13 32388523 32388545 -87895767 + (A)n Simple_repeat Simple_repeat 1 22 0 5 832 412 200 0 48 chr13 32389072 32389156 -87895156 + ID4_ SINE ID 2 81 -2 5 832 429 311 0 10 chr13 32389944 32390048 -87894264 + PB1 SINE Alu 5 107 -20 5 832 261 0 0 0 chr13 32390056 32390085 -87894227 + (TCTCCC)n Simple_repeat Simple_repeat 3 31 0 5 832 606 14 0 0 chr13 32391470 32391541 -87892771 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 832 288 0 0 0 chr13 32391541 32391572 -87892740 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 832 270 0 0 0 chr13 32391572 32391601 -87892711 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 832 448 283 25 42 chr13 32391609 32391727 -87892585 - RSINE1 SINE B4 -49 116 1 5 832 984 246 5 5 chr13 32392303 32392503 -87891809 + B3 SINE B2 1 200 -16 5 832 3339 78 65 2 chr13 32393985 32394432 -87889880 + IAPLTR2_Mm LTR ERVK 1 475 0 5 832 1269 66 10 98 chr13 32394433 32394636 -87889676 + IAPEz-int LTR ERVK 9 193 -6288 5 832 232 327 0 0 chr13 32394636 32394691 -87889621 + RLTR27 LTR ERVK 221 275 -34 5 832 3488 87 24 42 chr13 32394691 32395342 -87888970 + IAPEz-int LTR ERVK 168 662 -5819 5 832 992 50 0 0 chr13 32395342 32395461 -87888851 + IAPEz-int LTR ERVK 1359 1477 -5004 5 832 1917 86 4 0 chr13 32395462 32395707 -87888605 + IAPEz-int LTR ERVK 2252 2497 -5183 5 832 14687 54 9 3 chr13 32395725 32397516 -87886796 + IAPEz-int LTR ERVK 4678 6479 -2 5 832 3363 74 65 2 chr13 32397518 32397965 -87886347 + IAPLTR2_Mm LTR ERVK 1 475 0 5 832 210 156 0 0 chr13 32399773 32399818 -87884494 + GA-rich Low_complexity Low_complexity 2 46 0 5 832 257 220 55 90 chr13 32400520 32400665 -87883647 - L1M5 LINE L1 -2629 3517 3378 5 832 251 235 111 56 chr13 32401103 32401175 -87883137 - ID4 SINE ID 0 83 8 5 832 383 319 117 12 chr13 32401185 32401356 -87882956 - MER5A DNA MER1_type 0 189 1 5 832 505 250 7 46 chr13 32401540 32401691 -87882621 + ID_B1 SINE B4 78 222 -2 5 832 864 126 7 22 chr13 32401558 32401696 -87882616 + B1_Mur4 SINE Alu 15 150 0 5 832 267 215 0 0 chr13 32401738 32401803 -87882509 + GA-rich Low_complexity Low_complexity 4 68 0 5 832 257 378 69 11 chr13 32401973 32402147 -87882165 - MLT1J LTR MaLR -229 283 100 5 832 2267 139 34 70 chr13 32402260 32402375 -87881937 + MTC LTR MaLR 21 120 -301 5 832 1167 57 43 0 chr13 32402375 32402516 -87881796 - B1_Mm SINE Alu 0 147 1 5 832 2267 139 34 70 chr13 32402516 32402816 -87881496 + MTC LTR MaLR 121 421 0 5 832 260 288 0 0 chr13 32402923 32402982 -87881330 + L2a LINE L2 3368 3426 0 5 832 555 293 80 46 chr13 32403209 32403384 -87880928 + B3A SINE B2 2 182 -16 5 832 25 31 0 0 chr13 32403393 32403425 -87880887 + AT_rich Low_complexity Low_complexity 1 32 0 5 832 237 311 13 26 chr13 32404945 32405021 -87879291 + RSINE1 SINE B4 88 162 -3 5 832 255 31 0 0 chr13 32405170 32405202 -87879110 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 832 1289 48 0 0 chr13 32405233 32405380 -87878932 + B1_Mus2 SINE Alu 1 147 0 5 832 285 234 31 15 chr13 32406190 32406255 -87878057 + ORR1E LTR MaLR 1 66 -293 5 832 39 22 0 0 chr13 32406325 32406371 -87877941 + AT_rich Low_complexity Low_complexity 1 46 0 5 832 242 192 154 0 chr13 32407289 32407341 -87876971 + tRNA-Ala-GCA tRNA tRNA 1 60 -15 5 832 279 79 0 0 chr13 32407948 32407986 -87876326 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 5 832 426 222 0 22 chr13 32408291 32408383 -87875929 + MLT2D LTR ERVL 5 94 -320 5 832 381 278 128 64 chr13 32408399 32408603 -87875709 + MLT2D LTR ERVL 174 390 -7 5 832 202 229 21 0 chr13 32408774 32408822 -87875490 + GA-rich Low_complexity Low_complexity 2 50 0 5 832 3042 52 0 0 chr13 32409758 32410104 -87874208 + ORR1A1 LTR MaLR 1 346 0 5 832 745 334 78 28 chr13 32411122 32411442 -87872870 - MER2 DNA MER2_type -4 341 6 5 832 6934 54 74 19 chr13 32411662 32412658 -87871654 + L1_Mus2 LINE L1 5519 6566 0 5 832 23 0 0 0 chr13 32412683 32412706 -87871606 + AT_rich Low_complexity Low_complexity 1 23 0 5 832 323 23 23 0 chr13 32413510 32413554 -87870758 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 832 262 281 6 17 chr13 32413938 32414010 -87870302 - PB1D10 SINE Alu -73 74 2 5 832 380 154 62 0 chr13 32414057 32414122 -87870190 + B3A SINE B2 9 77 -121 5 832 756 266 42 5 chr13 32414656 32414845 -87869467 + B3A SINE B2 3 198 0 5 832 367 246 9 42 chr13 32417486 32417599 -87866713 + L1MB7 LINE L1 5742 5851 -333 5 832 227 294 82 75 chr13 32417634 32417781 -87866531 + MTE2a LTR MaLR 39 186 -179 5 832 243 233 51 51 chr13 32417855 32417947 -87866365 + MTE2a LTR MaLR 290 389 -19 5 832 270 245 20 69 chr13 32418032 32418133 -87866179 + L1MB7 LINE L1 6018 6113 -61 5 832 412 303 142 27 chr13 32418343 32418526 -87865786 - MER58A DNA MER1_type -18 206 3 5 832 233 298 31 31 chr13 32418612 32418709 -87865603 - L2c LINE L2 -9 3378 3282 5 832 477 290 94 28 chr13 32418868 32419049 -87865263 + LTR40a LTR ERVL 39 231 -288 5 832 1687 199 122 0 chr13 32419053 32419414 -87864898 - MTD LTR MaLR -14 405 1 6 832 241 179 0 130 chr13 32419487 32419564 -87864748 + PB1 SINE Alu 57 123 -4 6 832 518 282 64 68 chr13 32419576 32419822 -87864490 + LTR40a LTR ERVL 227 519 0 5 832 666 279 0 7 chr13 32420033 32420174 -87864138 + RSINE1 SINE B4 3 142 -23 6 832 4833 58 3 2 chr13 32420564 32421130 -87863182 + L1_Mus3 LINE L1 6070 6636 -2 6 832 222 37 0 0 chr13 32421371 32421398 -87862914 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 832 610 271 268 23 chr13 32421719 32422028 -87862284 + MTD LTR MaLR 3 387 -32 6 832 198 0 0 0 chr13 32422038 32422060 -87862252 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 832 281 75 0 79 chr13 32423171 32423239 -87861073 - B1_Mur4 SINE Alu 0 150 88 6 832 283 235 105 12 chr13 32423351 32423437 -87860875 + PB1 SINE Alu 22 115 -12 6 832 599 291 0 48 chr13 32423467 32423655 -87860657 - B3A SINE B2 -18 180 2 6 832 271 284 8 101 chr13 32423725 32423854 -87860458 + PB1D10 SINE Alu 1 117 0 6 832 204 385 83 0 chr13 32424007 32424116 -87860196 + L2b LINE L2 3249 3366 -9 6 832 229 72 44 67 chr13 32424132 32424177 -87860135 + B1_Mur4 SINE Alu 106 149 -1 6 832 686 264 54 71 chr13 32425467 32425691 -87858621 + ID_B1 SINE B4 1 220 -4 6 832 287 242 0 0 chr13 32425905 32425967 -87858345 + MIR SINE MIR 200 261 -1 6 832 183 241 119 17 chr13 32426022 32426081 -87858231 + L2c LINE L2 3323 3387 0 6 832 1203 252 113 18 chr13 32426819 32427218 -87857094 + BGLII_A LTR ERVK 1 437 -8 6 832 613 196 9 18 chr13 32427227 32427341 -87856971 + B1F SINE Alu 32 144 -5 6 832 589 232 6 31 chr13 32427794 32427927 -87856385 + ORR1C1 LTR MaLR 1 139 -190 6 832 447 107 0 0 chr13 32427927 32428002 -87856310 + (TCTCTG)n Simple_repeat Simple_repeat 4 78 0 6 832 382 240 95 9 chr13 32428002 32428071 -87856241 + ORR1C1 LTR MaLR 140 218 -111 6 832 1208 199 163 21 chr13 32428071 32428359 -87855953 - MTD LTR MaLR -79 340 12 6 832 186 133 0 0 chr13 32431257 32431287 -87853025 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 832 693 275 78 29 chr13 32431907 32432188 -87852124 - MLT1B LTR MaLR -38 352 58 6 832 393 267 129 0 chr13 32432164 32432265 -87852047 + RSINE1 SINE B4 5 118 -47 6 832 216 0 0 0 chr13 32432383 32432407 -87851905 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 6 832 900 277 18 18 chr13 32432415 32432639 -87851673 - ID_B1 SINE B4 0 224 1 6 832 554 257 80 20 chr13 32433171 32433322 -87850990 - RSINE1 SINE B4 -2 163 4 6 832 555 299 29 7 chr13 32433327 32433465 -87850847 + MTEa LTR MaLR 1 141 -238 6 832 372 314 52 36 chr13 32433465 32433519 -87850793 + MT2A LTR ERVL 1 195 -338 6 832 481 282 137 44 chr13 32433520 32433702 -87850610 + MT2A LTR ERVL 332 530 -3 6 832 1000 259 4 75 chr13 32433702 32433979 -87850333 + MER2 DNA MER2_type 80 336 -9 6 832 472 228 230 14 chr13 32434011 32434220 -87850092 - L1MD2 LINE L1 -281 6078 5825 6 832 574 278 106 43 chr13 32434398 32434586 -87849726 + RMER15 LTR ERVL 362 561 -14 6 832 595 268 116 12 chr13 32434589 32434831 -87849481 - L1MD2 LINE L1 -522 5837 5571 6 832 539 245 42 66 chr13 32435120 32435286 -87849026 + MT2A LTR ERVL 303 464 -69 6 832 2963 154 11 192 chr13 32435437 32436272 -87848040 - RMER6C LTR ERVK 0 690 7 6 832 1048 31 16 0 chr13 32436551 32436679 -87847633 + B1_Mus1 SINE Alu 19 148 0 6 832 446 297 8 8 chr13 32436885 32437004 -87847308 - PB1 SINE Alu -2 125 7 6 832 28 29 0 0 chr13 32439209 32439244 -87845068 + AT_rich Low_complexity Low_complexity 1 35 0 6 832 462 234 21 11 chr13 32439290 32439385 -87844927 + RLTR42-int LTR ERVK 1700 1795 -3727 6 832 637 112 16 72 chr13 32440479 32440529 -87843783 - Lx2B LINE L1 0 7000 6956 6 832 3122 65 16 55 chr13 32440529 32440967 -87843345 - BGLII LTR ERVK 0 421 1 6 832 637 112 16 72 chr13 32440967 32441041 -87843271 - Lx2B LINE L1 -45 6955 6883 6 832 579 118 12 0 chr13 32441041 32441126 -87843186 - Lx2B LINE L1 -204 6793 6708 6 832 540 231 152 30 chr13 32441243 32441479 -87842833 + RLTR10A LTR ERVK 147 411 0 6 832 353 297 133 38 chr13 32441695 32441905 -87842407 + RMER15 LTR ERVL 324 553 -22 6 832 2028 114 3 69 chr13 32442314 32442663 -87841649 + IAPLTR1a_Mm LTR ERVK 1 326 -11 6 832 59385 10 2 7 chr13 32442664 32449176 -87835136 + IAPEz-int LTR ERVK 1 6481 0 6 832 1889 117 3 69 chr13 32449176 32449525 -87834787 + IAPLTR1a_Mm LTR ERVK 1 326 -11 6 832 519 45 0 0 chr13 32450164 32450230 -87834082 + (TC)n Simple_repeat Simple_repeat 1 66 0 6 832 7342 68 83 0 chr13 32450882 32451867 -87832445 - Lx LINE L1 0 6654 5588 6 832 21 89 0 0 chr13 32452110 32452166 -87832146 + AT_rich Low_complexity Low_complexity 1 56 0 6 832 23 0 0 0 chr13 32452178 32452201 -87832111 + AT_rich Low_complexity Low_complexity 1 23 0 6 832 2306 99 121 3 chr13 32453152 32453525 -87830787 - Lx LINE L1 0 6654 6238 6 832 428 303 88 28 chr13 32453826 32454043 -87830269 + MIRb SINE MIR 20 249 -19 6 832 575 295 99 21 chr13 32454310 32454479 -87829833 + MLT1C LTR MaLR 24 207 -260 6 832 477 122 0 0 chr13 32454479 32454553 -87829759 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 832 575 295 99 21 chr13 32454553 32454715 -87829597 + MLT1C LTR MaLR 208 380 -87 6 832 316 294 28 56 chr13 32455250 32455358 -87828954 + MLT1G LTR MaLR 191 295 -296 6 832 899 73 0 8 chr13 32455474 32455599 -87828713 + Lx LINE L1 6297 6420 -234 6 832 1025 135 0 20 chr13 32455687 32455838 -87828474 + B1_Mur4 SINE Alu 2 149 -1 6 832 6051 106 69 5 chr13 32456029 32457011 -87827301 + ORR1A2-int LTR MaLR 919 1963 0 6 832 1712 79 35 83 chr13 32457011 32457301 -87827011 + ORR1A2 LTR MaLR 1 276 -51 6 832 531 0 0 0 chr13 32457309 32457368 -87826944 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 832 324 286 56 19 chr13 32457881 32457988 -87826324 + ID_B1 SINE B4 23 133 -91 6 832 304 200 11 45 chr13 32458061 32458150 -87826162 + A-rich Low_complexity Low_complexity 2 87 0 6 832 1283 167 81 50 chr13 32458709 32459066 -87825246 + RLTR20B2 LTR ERVK 1 465 -95 6 832 366 23 0 0 chr13 32459066 32459109 -87825203 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 832 1283 167 107 62 chr13 32459109 32459157 -87825155 + RLTR20B2 LTR ERVK 466 513 -47 6 832 251 370 95 38 chr13 32459293 32459504 -87824808 - LTR78 LTR ERV1 -912 392 170 6 832 288 0 0 0 chr13 32459645 32459677 -87824635 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 832 358 323 30 37 chr13 32459684 32459819 -87824493 - RSINE1 SINE B4 -28 137 4 6 832 467 297 12 0 chr13 32460628 32460793 -87823519 - BLACKJACK DNA AcHobo -462 2482 2316 6 832 224 374 24 0 chr13 32461406 32461489 -87822823 - PB1D10 SINE Alu -19 98 14 6 832 371 324 75 75 chr13 32461674 32461901 -87822411 + MER2 DNA MER2_type 118 344 -1 6 832 333 310 36 61 chr13 32462408 32462573 -87821739 + MER5B DNA MER1_type 17 177 -1 6 832 397 290 46 89 chr13 32463401 32463528 -87820784 + L1ME2z LINE L1 5944 6056 -388 6 832 323 275 0 0 chr13 32463528 32463608 -87820704 - ID4 SINE ID -2 81 2 6 832 397 290 46 89 chr13 32463608 32463806 -87820506 + L1ME2z LINE L1 6057 6255 -189 6 832 286 309 31 0 chr13 32463848 32463945 -87820367 + B4A SINE B4 6 105 -187 6 832 319 270 22 0 chr13 32463946 32464035 -87820277 + (CA)n Simple_repeat Simple_repeat 2 92 0 6 832 761 0 11 0 chr13 32464036 32464125 -87820187 + (GA)n Simple_repeat Simple_repeat 1 90 0 6 832 564 238 0 30 chr13 32464738 32464872 -87819440 - RSINE1 SINE B4 -34 131 2 6 832 350 333 48 39 chr13 32465286 32465492 -87818820 - L1MA5A LINE L1 -428 5869 5662 6 832 507 215 14 71 chr13 32465493 32465633 -87818679 + B3A SINE B2 1 132 -66 6 832 378 42 0 0 chr13 32465669 32465717 -87818595 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 832 303 228 76 0 chr13 32465738 32465817 -87818495 - L1MA5A LINE L1 -633 5679 5595 6 832 8153 144 42 52 chr13 32465827 32467077 -87817235 - Lx5 LINE L1 -4 7046 5794 6 832 1519 72 0 0 chr13 32467077 32467271 -87817041 - B2_Mm2 SINE B2 0 195 2 6 832 8153 131 7 70 chr13 32467271 32467719 -87816593 - Lx5 LINE L1 -1257 5793 5355 6 832 364 266 36 54 chr13 32468010 32468177 -87816135 + RNLTR23 LTR ERVK 479 642 0 6 832 517 61 0 155 chr13 32468178 32468225 -87816087 - Lx5 LINE L1 -514 5363 5330 6 832 1209 28 14 0 chr13 32468225 32468370 -87815942 + B1_Mm SINE Alu 1 147 0 6 832 517 61 0 155 chr13 32468370 32468419 -87815893 - Lx5 LINE L1 -548 5329 5282 6 832 1919 146 9 0 chr13 32468414 32468742 -87815570 + L1_Mur2 LINE L1 2751 3081 -2796 6 832 330 289 66 10 chr13 32468792 32468985 -87815327 - L1MA5A LINE L1 -754 5546 5352 6 832 921 79 0 0 chr13 32468992 32469119 -87815193 + (TTTC)n Simple_repeat Simple_repeat 3 129 0 6 832 478 192 46 37 chr13 32469120 32469228 -87815084 - B1_Mur2 SINE Alu -1 148 40 6 832 868 236 60 36 chr13 32469249 32469530 -87814782 - L1MA5A LINE L1 -1331 4809 4522 6 832 750 297 123 22 chr13 32469567 32470111 -87814201 - L1MA5A LINE L1 -1806 4334 3736 6 832 657 117 0 19 chr13 32471033 32471138 -87813174 + B3 SINE B2 6 108 -108 6 832 230 217 0 0 chr13 32471542 32471588 -87812724 + PB1 SINE Alu 79 124 -3 6 832 337 235 12 0 chr13 32471830 32471911 -87812401 + B2_Mm2 SINE B2 1 82 -113 6 832 2033 152 57 24 chr13 32471955 32472325 -87811987 + RLTR14 LTR ERV1 1 382 0 6 832 214 174 0 0 chr13 32472630 32472676 -87811636 + (TAA)n Simple_repeat Simple_repeat 3 48 0 6 832 275 236 0 138 chr13 32473041 32473164 -87811148 + MT2B LTR ERVL 152 257 -344 6 832 801 196 0 0 chr13 32473065 32473208 -87811104 + B1_Mur2 SINE Alu 6 148 -1 6 832 327 254 77 26 chr13 32473959 32474076 -87810236 + MER31-int LTR ERV1 3621 3743 -1613 6 832 292 212 76 0 chr13 32474193 32474259 -87810053 - B1F SINE Alu -55 94 24 6 832 269 213 33 0 chr13 32474273 32474334 -87809978 + MER31-int LTR ERV1 4166 4228 -708 6 832 864 278 35 35 chr13 32474921 32475234 -87809078 + MER31-int LTR ERV1 4223 4535 -401 6 832 203 260 0 0 chr13 32475964 32476014 -87808298 + L2b LINE L2 3308 3357 -18 6 832 263 67 44 0 chr13 32476125 32476170 -87808142 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 6 832 369 0 0 0 chr13 32476250 32476291 -87808021 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 832 1175 34 7 0 chr13 32476805 32476951 -87807361 + B1_Mm SINE Alu 1 147 0 6 832 313 323 0 24 chr13 32477127 32477193 -87807119 + T-rich Low_complexity Low_complexity 62 127 0 6 832 1161 42 0 40 chr13 32477193 32477343 -87806969 - B1_Mus1 SINE Alu 0 148 5 6 832 313 323 0 24 chr13 32477343 32477403 -87806909 + T-rich Low_complexity Low_complexity 4 61 0 6 832 212 100 0 48 chr13 32477522 32477564 -87806748 + (TGGGGG)n Simple_repeat Simple_repeat 3 42 0 6 832 1679 137 73 79 chr13 32478507 32478863 -87805449 - ORR1B1 LTR MaLR 0 394 41 7 832 591 298 172 45 chr13 32479120 32479498 -87804814 + MLT1D LTR MaLR 53 484 -21 7 832 3398 35 5 0 chr13 32479498 32479892 -87804420 + MTA_Mm LTR MaLR 1 396 0 7 832 591 298 172 45 chr13 32479892 32479913 -87804399 + MLT1D LTR MaLR 485 503 -2 7 832 7964 82 21 3 chr13 32479933 32481593 -87802719 - L1_Mus3 LINE L1 0 6638 4944 7 832 228 158 70 0 chr13 32481594 32481651 -87802661 + MLT1D LTR MaLR 443 503 -2 7 832 647 296 50 43 chr13 32481817 32482117 -87802195 - MLT2B3 LTR ERVL -8 546 245 7 832 1067 258 24 69 chr13 32482140 32482287 -87802025 + MTE2b LTR MaLR 62 206 -173 7 832 297 100 0 0 chr13 32482287 32482337 -87801975 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 7 832 1067 258 24 69 chr13 32482337 32482522 -87801790 + MTE2b LTR MaLR 207 379 0 7 832 695 279 33 58 chr13 32482522 32482763 -87801549 - MLT1A LTR MaLR -16 358 124 7 832 283 252 134 38 chr13 32482935 32483092 -87801220 - L1MC LINE L1 -2184 5698 5527 7 832 1933 262 53 37 chr13 32483154 32483801 -87800511 - L1MB1 LINE L1 0 6168 5512 7 832 349 306 109 11 chr13 32483825 32483962 -87800350 - B4A SINE B4 -77 147 2 7 832 547 233 311 10 chr13 32483962 32484361 -87799951 - L1MB1 LINE L1 -745 5395 4877 7 832 1131 219 204 0 chr13 32485231 32485555 -87798757 + ORR1B1 LTR MaLR 5 394 0 7 832 333 272 18 20 chr13 32485772 32485881 -87798431 + PB1 SINE Alu 29 219 -92 7 832 538 288 47 106 chr13 32485960 32486070 -87798242 + L1ME2 LINE L1 5555 5654 -510 7 832 378 200 24 24 chr13 32486070 32486152 -87798160 + ID4 SINE ID 2 83 0 7 832 538 288 47 106 chr13 32486152 32486484 -87797828 + L1ME2 LINE L1 5655 5971 -193 7 832 975 129 0 0 chr13 32486514 32486692 -87797620 + (TA)n Simple_repeat Simple_repeat 2 179 0 7 832 911 101 14 0 chr13 32486696 32486834 -87797478 - B2_Mm2 SINE B2 -54 141 2 7 832 405 0 0 0 chr13 32486847 32486892 -87797420 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 832 975 212 176 121 chr13 32487314 32487786 -87796526 + MT2A LTR ERVL 2 499 -34 7 832 396 0 0 0 chr13 32487809 32487853 -87796459 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 832 261 0 0 0 chr13 32487853 32487881 -87796431 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 832 271 140 0 57 chr13 32487891 32487944 -87796368 + MT2A LTR ERVL 535 584 0 7 832 771 181 263 0 chr13 32488070 32488241 -87796071 - B3 SINE B2 0 216 1 7 832 1288 163 85 109 chr13 32488245 32488575 -87795737 + RLTRETN_Mm LTR ERVK 1 322 0 7 832 1168 75 0 0 chr13 32488620 32488767 -87795545 - B1_Mm SINE Alu 0 147 1 7 832 21 0 0 0 chr13 32488926 32488947 -87795365 + AT_rich Low_complexity Low_complexity 1 21 0 7 832 243 376 43 0 chr13 32489562 32489703 -87794609 + RMER15 LTR ERVL 406 552 -23 7 832 470 104 0 25 chr13 32489716 32489795 -87794517 - RMER19C LTR ERVK 0 611 535 7 832 711 167 32 24 chr13 32489808 32490017 -87794295 - RMER19C LTR ERVK -339 272 1 7 832 3539 30 0 0 chr13 32490856 32491252 -87793060 - MTA_Mm LTR MaLR 0 396 1 7 832 429 20 0 0 chr13 32491604 32491654 -87792658 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 832 1289 93 16 11 chr13 32491750 32491935 -87792377 - B2_Mm2 SINE B2 -8 187 2 7 832 296 267 22 0 chr13 32492388 32492478 -87791834 - L1MB4 LINE L1 -4 6176 6085 7 832 690 278 85 4 chr13 32492491 32492751 -87791561 - L1M3 LINE L1 -1594 4546 4266 7 832 3512 33 0 0 chr13 32492789 32493185 -87791127 + MTA_Mm LTR MaLR 1 396 0 7 832 743 162 7 0 chr13 32493204 32493346 -87790966 + (TG)n Simple_repeat Simple_repeat 2 144 0 7 832 624 250 6 101 chr13 32493355 32493533 -87790779 - RSINE1 SINE B4 0 165 5 7 832 379 272 41 62 chr13 32494004 32494019 -87790293 - HERVL74-int LTR ERVL -3114 2571 2558 7 832 2181 121 16 0 chr13 32494019 32494341 -87789971 + ORR1A2 LTR MaLR 1 327 0 7 832 379 272 41 62 chr13 32494341 32494470 -87789842 - HERVL74-int LTR ERVL -3128 2557 2430 7 832 2925 187 39 23 chr13 32494630 32495195 -87789117 + Lx5 LINE L1 6474 7047 -3 7 832 1340 196 16 83 chr13 32495202 32495514 -87788798 + ORR1C2 LTR MaLR 94 384 0 7 832 393 22 0 0 chr13 32495584 32495630 -87788682 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 832 360 0 0 0 chr13 32495630 32495669 -87788643 + (GA)n Simple_repeat Simple_repeat 1 40 0 7 832 324 235 71 0 chr13 32496209 32496294 -87788018 + MER89-int LTR ERV1 1162 1252 -5549 7 832 369 309 62 22 chr13 32496360 32496539 -87787773 + MER89-int LTR ERV1 1234 1419 -5382 7 832 2326 142 8 10 chr13 32496540 32496932 -87787380 - MTC LTR MaLR 0 421 31 7 832 237 196 0 0 chr13 32497436 32497487 -87786825 + (CACG)n Simple_repeat Simple_repeat 1 51 0 7 832 376 354 27 34 chr13 32497772 32497921 -87786391 - B1F SINE Alu 0 149 2 7 832 387 0 0 0 chr13 32497922 32497965 -87786347 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 832 559 282 14 6 chr13 32497988 32498193 -87786119 - L1MA4 LINE L1 -349 5951 5737 7 832 1710 282 63 46 chr13 32498559 32499399 -87784913 + Lx7 LINE L1 6866 7696 0 7 832 269 233 17 0 chr13 32500129 32500189 -87784123 - ID4 SINE ID -20 63 3 1 832 333 261 43 0 chr13 32500305 32500397 -87783915 - B1F1 SINE Alu -7 142 47 2 832 804 135 49 21 chr13 32500756 32500900 -87783412 + B1_Mus1 SINE Alu 1 148 0 3 832 29 28 0 0 chr13 32501082 32501118 -87783194 + AT_rich Low_complexity Low_complexity 1 36 0 4 832 419 217 81 19 chr13 32501136 32501296 -87783016 - L1MA6 LINE L1 -1 6299 6130 5 832 257 250 39 26 chr13 32501388 32501466 -87782846 - L1MA6 LINE L1 -342 5958 5880 5 832 787 263 72 23 chr13 32501466 32501680 -87782632 - B4A SINE B4 0 292 80 6 832 311 208 0 0 chr13 32501744 32501797 -87782515 + tRNA-Ala-GCY_ tRNA tRNA 15 67 -8 7 832 246 304 14 14 chr13 32501745 32501815 -87782497 + ID_B1 SINE B4 23 92 -132 8 832 521 306 0 20 chr13 32501911 32502058 -87782254 - RSINE1 SINE B4 -16 149 6 9 832 241 214 0 0 chr13 32502154 32502196 -87782116 + LSU-rRNA_Hsa rRNA rRNA 4974 5015 -20 1 832 460 193 8 8 chr13 32502209 32502329 -87781983 + (TG)n Simple_repeat Simple_repeat 2 121 0 1 832 301 186 28 14 chr13 32502770 32502841 -87781471 + MER58D DNA MER1_type 310 381 -5 1 832 204 132 26 0 chr13 32503150 32503188 -87781124 + (GGGTG)n Simple_repeat Simple_repeat 3 41 0 1 832 468 0 0 0 chr13 32504089 32504141 -87780171 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 832 2305 247 85 38 chr13 32504143 32504218 -87780094 - Lx9 LINE L1 -174 7470 7400 1 832 2501 123 34 13 chr13 32504218 32504604 -87779708 - ORR1B1 LTR MaLR 0 394 1 1 832 2305 247 85 38 chr13 32504604 32505209 -87779103 - Lx9 LINE L1 -245 7399 6758 1 832 2146 88 6 59 chr13 32505227 32505564 -87778748 - ORR1A2 LTR MaLR -8 319 1 1 832 537 240 87 76 chr13 32505569 32505754 -87778558 - Lx9 LINE L1 -901 6743 6557 1 833 286 292 125 0 chr13 32506083 32506179 -87778133 - PB1 SINE Alu -9 118 11 1 833 794 306 122 42 chr13 32507002 32507528 -87776784 - L1MB3 LINE L1 -110 6073 5506 1 833 227 231 39 0 chr13 32507559 32507611 -87776701 + (CGTG)n Simple_repeat Simple_repeat 2 55 0 2 833 1240 225 231 88 chr13 32507680 32507725 -87776587 - MT2A LTR ERVL 0 533 489 2 833 279 0 0 0 chr13 32507725 32507756 -87776556 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 2 833 1240 225 231 88 chr13 32507756 32508174 -87776138 - MT2A LTR ERVL -45 488 4 2 833 337 276 44 15 chr13 32508189 32508325 -87775987 - L1M4 LINE L1 -696 5482 5343 2 833 657 261 22 11 chr13 32509226 32509408 -87774904 + MLT1B LTR MaLR 67 250 -140 2 833 353 344 133 11 chr13 32510179 32510458 -87773854 - MLT1A0 LTR MaLR -32 333 21 2 833 2372 90 39 25 chr13 32511884 32512248 -87772064 - Lx LINE L1 -6 6648 6280 2 833 1318 90 23 0 chr13 32512279 32512456 -87771856 + B2_Mm2 SINE B2 2 182 -13 2 833 247 94 0 9 chr13 32512476 32512524 -87771788 + B2_Mm2 SINE B2 64 109 -107 2 833 719 222 156 0 chr13 32512700 32512880 -87771432 + B3 SINE B2 1 208 -8 2 833 308 231 38 90 chr13 32513177 32513310 -87771002 - L1MC5 LINE L1 -49 7912 7787 3 833 349 301 132 42 chr13 32513350 32513550 -87770762 + B4A SINE B4 3 221 -71 3 833 605 223 0 0 chr13 32513550 32513671 -87770641 + B3 SINE B2 1 121 -95 3 833 495 0 0 0 chr13 32513699 32513754 -87770558 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 833 304 312 160 18 chr13 32513875 32514094 -87770218 + L1MC LINE L1 5497 5746 -2136 3 833 231 261 29 0 chr13 32514191 32514260 -87770052 + L1MA6 LINE L1 6206 6276 -24 3 833 431 293 32 0 chr13 32514370 32514493 -87769819 + MER20 DNA MER1_type 28 154 -65 3 833 265 329 0 0 chr13 32514781 32514857 -87769455 + ID4 SINE ID 8 83 0 3 833 892 169 16 9 chr13 32515098 32515535 -87768777 + GA-rich Low_complexity Low_complexity 1 440 0 3 833 864 159 6 11 chr13 32515550 32515728 -87768584 + GA-rich Low_complexity Low_complexity 2 178 0 3 833 515 247 133 25 chr13 32515831 32515989 -87768323 - B3 SINE B2 0 216 42 3 833 372 169 39 0 chr13 32516011 32516088 -87768224 - PB1D10 SINE Alu -8 109 30 4 833 483 73 0 0 chr13 32516227 32516295 -87768017 + (TA)n Simple_repeat Simple_repeat 1 68 0 4 833 491 170 36 0 chr13 32516300 32516412 -87767900 + Lx9 LINE L1 7527 7642 -2 4 833 979 39 0 0 chr13 32516673 32516800 -87767512 - B1_Mus1 SINE Alu -21 127 1 4 833 251 360 0 75 chr13 32516953 32517073 -87767239 - L2b LINE L2 -4 3371 3261 4 833 1115 252 50 50 chr13 32517177 32517515 -87766797 + MTEa LTR MaLR 1 338 -41 4 833 241 253 102 155 chr13 32519295 32519482 -87764830 - ORR1C2 LTR MaLR -113 271 95 4 833 369 0 0 0 chr13 32519842 32519883 -87764429 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 833 437 50 17 0 chr13 32520058 32520118 -87764194 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 833 333 0 0 0 chr13 32520870 32520907 -87763405 + (CAA)n Simple_repeat Simple_repeat 1 37 0 4 833 264 288 0 0 chr13 32520922 32520995 -87763317 - MIR SINE MIR -11 251 179 5 833 482 30 0 29 chr13 32521153 32521222 -87763090 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 5 833 383 292 0 0 chr13 32521239 32521345 -87762967 - PB1 SINE Alu 0 127 22 5 833 397 225 49 98 chr13 32521471 32521490 -87762822 - ORR1E LTR MaLR 0 379 361 5 833 189 0 0 0 chr13 32521490 32521511 -87762801 + (TTG)n Simple_repeat Simple_repeat 1 21 0 5 833 565 271 77 72 chr13 32521511 32521835 -87762477 - ORR1E LTR MaLR -19 360 3 5 833 2765 120 5 2 chr13 32521860 32522253 -87762059 - ORR1B1 LTR MaLR 0 394 1 5 833 1959 216 44 5 chr13 32522891 32523320 -87760992 + MT2A LTR ERVL 10 455 -78 5 833 1053 128 152 5 chr13 32523321 32523518 -87760794 + URR1A DNA MER1_type 1 226 0 5 833 306 115 161 37 chr13 32523518 32523590 -87760722 + MT2A LTR ERVL 452 533 0 5 833 200 211 0 27 chr13 32524093 32524205 -87760107 + GA-rich Low_complexity Low_complexity 1 109 0 5 833 222 260 24 0 chr13 32524216 32524343 -87759969 + (GGATG)n Simple_repeat Simple_repeat 1 130 0 5 833 334 255 138 0 chr13 32524402 32524496 -87759816 - B1F1 SINE Alu -42 107 1 6 833 1884 187 9 91 chr13 32524509 32524950 -87759362 - MTD LTR MaLR -14 405 1 6 833 323 341 39 8 chr13 32525048 32525178 -87759134 + RSINE1 SINE B4 11 144 -21 6 833 984 272 188 0 chr13 32525657 32526062 -87758250 + L1MA6 LINE L1 5771 6251 -49 6 833 2739 48 3 0 chr13 32526083 32526419 -87757893 - L1Md_F2 LINE L1 -2 6580 6244 6 833 366 23 0 0 chr13 32526474 32526517 -87757795 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 833 462 18 0 0 chr13 32526517 32526571 -87757741 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 833 248 332 34 52 chr13 32526962 32527128 -87757184 + L2b LINE L2 3197 3387 0 6 833 198 118 0 0 chr13 32527274 32527308 -87757004 + (CAGG)n Simple_repeat Simple_repeat 2 35 0 6 833 540 0 0 0 chr13 32527966 32528026 -87756286 + (TTTTC)n Simple_repeat Simple_repeat 1 60 0 6 833 750 154 0 0 chr13 32528030 32528160 -87756152 + C-rich Low_complexity Low_complexity 2 131 0 7 833 237 108 0 0 chr13 32529673 32529710 -87754602 + (TCTCCC)n Simple_repeat Simple_repeat 1 37 0 7 833 254 204 0 0 chr13 32529737 32529786 -87754526 - ID2 SINE ID -32 51 3 7 833 23 33 0 0 chr13 32529790 32529820 -87754492 + AT_rich Low_complexity Low_complexity 1 30 0 7 833 576 266 83 22 chr13 32529833 32530014 -87754298 - B3A SINE B2 -3 192 1 7 833 306 0 0 0 chr13 32530325 32530359 -87753953 + (TAGA)n Simple_repeat Simple_repeat 3 36 0 7 833 416 185 0 21 chr13 32530632 32530726 -87753586 + CT-rich Low_complexity Low_complexity 1 92 0 7 833 540 273 49 25 chr13 32530753 32530956 -87753356 - MER82 DNA MER2_type -275 378 171 7 833 595 327 30 11 chr13 32531014 32531293 -87753019 + MER2 DNA MER2_type 14 312 -33 7 833 260 226 140 70 chr13 32531828 32531928 -87752384 - MER57C2 LTR ERV1 -278 156 50 7 833 24 0 0 0 chr13 32532702 32532726 -87751586 + AT_rich Low_complexity Low_complexity 1 24 0 8 833 288 0 0 0 chr13 32533029 32533061 -87751251 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 833 26 0 0 0 chr13 32534321 32534347 -87749965 + AT_rich Low_complexity Low_complexity 1 26 0 8 833 369 299 164 32 chr13 32534432 32534775 -87749537 + MLT1D LTR MaLR 39 413 -54 8 833 586 324 29 73 chr13 32534846 32535162 -87749150 - ORR1E LTR MaLR -52 307 6 8 833 243 88 0 0 chr13 32535195 32535229 -87749083 + (TA)n Simple_repeat Simple_repeat 1 34 0 8 833 263 153 81 12 chr13 32535236 32535322 -87748990 + (TCTA)n Simple_repeat Simple_repeat 2 93 0 8 833 663 203 109 0 chr13 32535409 32535537 -87748775 + B1_Mur1 SINE Alu 2 143 -6 8 833 21 36 0 0 chr13 32535652 32535680 -87748632 + AT_rich Low_complexity Low_complexity 1 28 0 8 833 1429 232 95 18 chr13 32537265 32537652 -87746660 + MTD LTR MaLR 1 404 -15 8 833 23 68 0 0 chr13 32537702 32537746 -87746566 + AT_rich Low_complexity Low_complexity 1 44 0 9 833 3276 218 54 48 chr13 32538899 32539831 -87744481 + RCHARR1 DNA MER1_type 4 940 -34 9 833 261 267 0 0 chr13 32540383 32540443 -87743869 + ID4 SINE ID 12 71 -12 9 833 693 204 0 0 chr13 32541464 32541611 -87742701 + (TA)n Simple_repeat Simple_repeat 1 147 0 9 833 201 347 49 16 chr13 32542684 32542807 -87741505 - L2a LINE L2 -1 3425 3299 9 833 551 298 0 7 chr13 32542925 32543067 -87741245 + ORR1E LTR MaLR 1 141 -218 9 833 332 176 0 63 chr13 32543135 32543214 -87741098 + ORR1E LTR MaLR 265 338 -41 9 833 243 0 0 0 chr13 32543515 32543542 -87740770 + (T)n Simple_repeat Simple_repeat 1 27 0 9 833 23 0 0 0 chr13 32544023 32544046 -87740266 + AT_rich Low_complexity Low_complexity 1 23 0 9 833 832 230 40 10 chr13 32544192 32544394 -87739918 - B3 SINE B2 0 216 9 9 833 609 296 63 9 chr13 32544544 32544766 -87739546 - MLT1F LTR MaLR -312 236 3 9 833 30 45 0 0 chr13 32545079 32545123 -87739189 + AT_rich Low_complexity Low_complexity 1 44 0 1 833 777 174 0 0 chr13 32545197 32545329 -87738983 - B1_Mur3 SINE Alu -5 144 13 1 833 231 308 13 0 chr13 32545366 32545444 -87738868 + (TG)n Simple_repeat Simple_repeat 1 79 0 1 833 428 302 152 31 chr13 32545448 32545704 -87738608 - B4A SINE B4 -4 288 2 1 833 363 213 8 38 chr13 32547452 32547584 -87736728 + (CATATA)n Simple_repeat Simple_repeat 6 133 0 1 833 268 302 139 14 chr13 32548181 32548389 -87735923 - L1M5 LINE L1 -762 5384 5151 1 833 223 279 0 0 chr13 32548677 32548738 -87735574 - B1_Mus2 SINE Alu -8 139 79 1 833 920 225 111 30 chr13 32549113 32549383 -87734929 + B4A SINE B4 1 292 0 1 833 601 241 165 99 chr13 32549403 32549808 -87734504 - MER57C2 LTR ERV1 -2 432 1 1 833 337 308 0 0 chr13 32551180 32551258 -87733054 + MER44D DNA MER2_type 1 78 -627 1 833 312 307 0 33 chr13 32551333 32551424 -87732888 - RSINE1 SINE B4 -68 97 10 1 833 682 307 18 0 chr13 32551428 32551594 -87732718 - B4A SINE B4 -59 233 65 1 833 1107 77 14 0 chr13 32551622 32551765 -87732547 - B1_Mus1 SINE Alu 0 148 4 1 833 305 267 13 0 chr13 32551767 32551842 -87732470 - B4A SINE B4 -216 76 1 1 833 849 232 62 10 chr13 32551867 32552059 -87732253 + MTE2b LTR MaLR 178 379 0 1 833 3711 197 60 0 chr13 32553820 32553938 -87730374 - RMER1A Other Other 0 1030 907 1 833 189 0 0 0 chr13 32553938 32553959 -87730353 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 833 3711 238 36 22 chr13 32553959 32555091 -87729221 - RMER1A Other Other -124 906 45 1 833 25 0 0 0 chr13 32555092 32555117 -87729195 + AT_rich Low_complexity Low_complexity 1 25 0 1 833 828 223 113 5 chr13 32555784 32555978 -87728334 + B3 SINE B2 2 216 0 1 833 286 240 68 29 chr13 32556723 32556826 -87727486 - MLT1A1 LTR MaLR -2 406 300 1 833 558 0 0 0 chr13 32557559 32557621 -87726691 + (GA)n Simple_repeat Simple_repeat 2 63 0 1 833 378 0 0 0 chr13 32558241 32558283 -87726029 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 833 294 274 87 24 chr13 32558866 32558993 -87725319 - MLT1A1 LTR MaLR -6 402 268 1 833 490 302 58 95 chr13 32559335 32559767 -87724545 - Charlie1a DNA MER1_type -1 1454 1039 1 833 1547 282 86 24 chr13 32559864 32560365 -87723947 + Lx8 LINE L1 6237 6768 -705 1 833 331 264 44 26 chr13 32560421 32560534 -87723778 - PB1D7 SINE Alu 0 120 6 1 833 340 303 125 4 chr13 32560538 32560770 -87723542 - Charlie1a DNA MER1_type -481 974 715 1 833 462 278 16 8 chr13 32560809 32560936 -87723376 + B1F SINE Alu 16 143 -6 1 833 361 282 33 49 chr13 32560983 32561166 -87723146 - Charlie1a DNA MER1_type -760 695 516 1 833 291 54 0 0 chr13 32561619 32561656 -87722656 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 833 680 304 23 70 chr13 32561685 32561790 -87722522 - B4A SINE B4 -1 291 200 1 833 4876 66 0 3 chr13 32561790 32562402 -87721910 - L1Md_F2 LINE L1 0 6582 5973 1 833 680 304 23 70 chr13 32562402 32562597 -87721715 - B4A SINE B4 -93 199 6 1 833 2100 170 44 17 chr13 32562879 32563287 -87721025 + MTC LTR MaLR 1 419 -2 1 833 266 331 27 34 chr13 32564827 32564974 -87719338 - L2a LINE L2 -80 3346 3201 1 833 258 290 0 48 chr13 32565332 32565437 -87718875 + GA-rich Low_complexity Low_complexity 5 104 0 1 833 258 136 0 0 chr13 32567255 32567299 -87717013 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 833 215 224 0 0 chr13 32567680 32567738 -87716574 + A-rich Low_complexity Low_complexity 1 58 0 1 833 218 147 29 29 chr13 32568396 32568466 -87715846 + GA-rich Low_complexity Low_complexity 1 70 0 1 833 227 250 0 0 chr13 32568685 32568737 -87715575 + CT-rich Low_complexity Low_complexity 4 55 0 1 833 303 85 0 0 chr13 32568752 32568799 -87715513 + (CCTCG)n Simple_repeat Simple_repeat 3 49 0 1 833 543 128 0 0 chr13 32568804 32568890 -87715422 + (TTTCC)n Simple_repeat Simple_repeat 5 90 0 1 833 855 63 16 8 chr13 32569565 32569693 -87714619 + (GAGAA)n Simple_repeat Simple_repeat 2 130 0 1 833 229 241 0 0 chr13 32569763 32569817 -87714495 - MLT1K LTR MaLR -16 392 339 1 833 807 269 133 12 chr13 32569817 32570073 -87714239 + B4A SINE B4 2 288 -4 1 833 210 261 15 30 chr13 32570076 32570143 -87714169 + (CATA)n Simple_repeat Simple_repeat 4 69 0 1 833 269 338 101 37 chr13 32570584 32570802 -87713510 - MLT1K LTR MaLR -319 276 45 1 833 340 194 28 0 chr13 32571644 32571752 -87712560 + (CAGA)n Simple_repeat Simple_repeat 4 114 0 1 833 224 244 0 0 chr13 32572386 32572431 -87711881 + CT-rich Low_complexity Low_complexity 2 46 0 1 833 25 0 0 0 chr13 32574125 32574150 -87710162 + AT_rich Low_complexity Low_complexity 1 25 0 1 833 215 226 0 19 chr13 32575371 32575425 -87708887 + CT-rich Low_complexity Low_complexity 2 54 0 1 833 913 331 42 36 chr13 32576344 32576839 -87707473 + L1MD2 LINE L1 562 1059 -5488 1 833 1630 221 42 75 chr13 32577071 32577593 -87706719 - RLTR16 LTR ERVK 0 505 1 1 833 425 254 60 0 chr13 32577600 32577734 -87706578 - MER63D DNA AcHobo -906 155 14 1 833 245 342 8 24 chr13 32579154 32579277 -87705035 + Tigger5 DNA MER2_type 3 123 -2283 1 833 316 322 141 69 chr13 32581936 32582256 -87702056 + MER110 LTR ERV1 80 422 -69 1 833 359 41 0 20 chr13 32582512 32582562 -87701750 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 1 833 995 298 101 64 chr13 32582817 32583430 -87700882 - L1MA7 LINE L1 -156 6135 5500 1 833 697 291 41 77 chr13 32583768 32584133 -87700179 - ORR1E LTR MaLR -1 358 7 1 833 552 218 31 25 chr13 32584407 32584567 -87699745 + MER53 DNA hAT 32 192 -1 1 833 22 0 0 0 chr13 32587132 32587154 -87697158 + AT_rich Low_complexity Low_complexity 1 22 0 1 833 207 228 17 17 chr13 32587580 32587638 -87696674 + CT-rich Low_complexity Low_complexity 3 60 0 1 833 332 145 0 28 chr13 32589035 32589106 -87695206 - L1MB7 LINE L1 -1 6183 6115 1 833 437 288 154 14 chr13 32589128 32589500 -87694812 - L1MB4 LINE L1 -8 6172 5741 1 833 934 285 47 39 chr13 32589556 32589917 -87694395 - L1MB4 LINE L1 -553 5621 5258 1 833 459 0 0 0 chr13 32590724 32590775 -87693537 + (TTCC)n Simple_repeat Simple_repeat 1 51 0 1 833 1000 139 0 16 chr13 32590776 32590959 -87693353 + CT-rich Low_complexity Low_complexity 1 180 0 1 833 301 0 44 22 chr13 32591309 32591354 -87692958 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 1 833 1041 256 86 3 chr13 32592262 32592575 -87691737 - L1MC1 LINE L1 0 6333 5995 1 833 226 205 0 0 chr13 32593380 32593419 -87690893 + polypurine Low_complexity Low_complexity 1 39 0 1 833 231 219 30 30 chr13 32594472 32594538 -87689774 + CT-rich Low_complexity Low_complexity 3 68 0 1 833 306 182 18 0 chr13 32594540 32594595 -87689717 - tRNA-Ala-GCA tRNA tRNA -14 61 6 1 833 244 304 79 7 chr13 32594739 32594878 -87689434 + L1MA5 LINE L1 6117 6265 -35 1 833 255 61 0 0 chr13 32594964 32594997 -87689315 + (TTTCC)n Simple_repeat Simple_repeat 3 35 0 1 833 254 100 0 39 chr13 32594994 32595046 -87689266 + (TTTTTG)n Simple_repeat Simple_repeat 4 53 0 1 833 1016 66 0 0 chr13 32595047 32595183 -87689129 - B1_Mus1 SINE Alu 0 148 13 1 833 636 185 146 0 chr13 32595186 32595316 -87688996 - B1_Mur4 SINE Alu -1 149 1 1 833 351 0 0 0 chr13 32595323 32595362 -87688950 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 833 309 26 0 0 chr13 32595362 32595399 -87688913 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 833 213 119 0 0 chr13 32595612 32595654 -87688658 + (T)n Simple_repeat Simple_repeat 1 42 0 1 833 316 242 164 45 chr13 32595670 32595804 -87688508 + MER117 DNA MER1_type 47 196 -1 1 833 928 322 85 18 chr13 32597580 32597981 -87686331 + Tigger7 DNA MER2_type 5 432 -2059 1 833 254 259 0 0 chr13 32597990 32598048 -87686264 + Tigger7 DNA MER2_type 2433 2490 -1 1 833 1271 104 11 16 chr13 32598458 32598643 -87685669 - B2_Mm1t SINE B2 -8 185 2 1 833 377 294 74 94 chr13 32598807 32599104 -87685208 - B4A SINE B4 -1 291 1 1 833 21 0 0 0 chr13 32599458 32599479 -87684833 + AT_rich Low_complexity Low_complexity 1 21 0 1 833 462 314 188 15 chr13 32599614 32600078 -87684234 - MER74A LTR ERVL 0 558 16 1 833 495 0 0 0 chr13 32600998 32601053 -87683259 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 833 231 316 0 0 chr13 32602889 32602965 -87681347 + ID4 SINE ID 2 77 -6 1 833 378 0 0 0 chr13 32602990 32603032 -87681280 + (TCCA)n Simple_repeat Simple_repeat 1 42 0 1 833 231 114 0 0 chr13 32603037 32603072 -87681240 + (CCTA)n Simple_repeat Simple_repeat 1 35 0 1 833 28 0 0 0 chr13 32604556 32604584 -87679728 + AT_rich Low_complexity Low_complexity 1 28 0 1 833 234 0 0 0 chr13 32604779 32604805 -87679507 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1 833 1073 296 20 10 chr13 32605593 32605985 -87678327 + MLT1C LTR MaLR 72 467 0 1 833 430 269 28 0 chr13 32608475 32608583 -87675729 + PB1D10 SINE Alu 7 117 0 1 833 505 193 185 0 chr13 32608669 32608788 -87675524 + B1F2 SINE Alu 2 142 -7 1 833 428 117 13 0 chr13 32608980 32609057 -87675255 + (TG)n Simple_repeat Simple_repeat 2 79 0 1 833 426 20 0 0 chr13 32609122 32609173 -87675139 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 833 242 301 36 0 chr13 32609441 32609524 -87674788 - L1ME3A LINE L1 -13 6160 6075 1 833 666 203 14 27 chr13 32611519 32611666 -87672646 + B3 SINE B2 72 216 0 1 833 432 0 0 0 chr13 32613023 32613071 -87671241 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 833 417 322 16 62 chr13 32613072 32613201 -87671111 - RSINE1 SINE B4 -41 124 2 1 833 771 366 59 12 chr13 32613288 32613800 -87670512 + Lx8 LINE L1 6932 7467 -6 1 833 560 171 119 24 chr13 32614532 32614658 -87669654 - B1F2 SINE Alu 0 149 12 1 833 379 238 55 37 chr13 32615989 32616098 -87668214 - RMER1C Other Other -726 616 506 1 833 2159 221 96 42 chr13 32616102 32616655 -87667657 + RMER1C Other Other 760 1342 0 1 833 494 276 40 40 chr13 32616952 32617201 -87667111 - Arthur1 DNA Tip100 -252 3695 3447 1 833 1141 70 28 0 chr13 32617683 32617826 -87666486 + B1_Mm SINE Alu 1 147 0 2 833 196 53 53 0 chr13 32617827 32617865 -87666447 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 2 833 1020 114 11 6 chr13 32617911 32618088 -87666224 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2 833 216 152 0 43 chr13 32618096 32618165 -87666147 + CT-rich Low_complexity Low_complexity 2 67 0 2 833 1221 82 0 0 chr13 32618165 32618312 -87666000 - B1_Mm SINE Alu 0 147 1 2 833 586 281 90 13 chr13 32618681 32618836 -87665476 + B3A SINE B2 1 167 -31 2 833 284 350 20 0 chr13 32619126 32619226 -87665086 - Arthur1 DNA Tip100 -3499 448 347 1 833 231 292 42 0 chr13 32619305 32619377 -87664935 - Arthur1 DNA Tip100 -3776 171 97 1 833 558 228 126 40 chr13 32619719 32619966 -87664346 + Charlie2b DNA MER1_type 1776 2043 -739 2 833 2168 13 0 0 chr13 32620163 32620397 -87663915 + L1Md_A LINE L1 6349 6582 0 2 833 318 26 0 0 chr13 32620469 32620508 -87663804 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 833 4499 27 0 0 chr13 32620550 32621038 -87663274 - L1Md_F3 LINE L1 -14 6570 6083 2 833 543 242 70 0 chr13 32621038 32621166 -87663146 - B1F2 SINE Alu -10 139 3 2 833 345 261 16 65 chr13 32621197 32621320 -87662992 - L1MA4A LINE L1 -377 5926 5810 2 833 24 0 0 0 chr13 32621345 32621369 -87662943 + AT_rich Low_complexity Low_complexity 1 24 0 2 833 293 280 138 33 chr13 32621506 32621687 -87662625 + LTR37A LTR ERV1 50 249 -177 2 833 233 234 91 61 chr13 32621894 32622026 -87662286 + LTR37A LTR ERV1 282 417 -9 2 833 830 247 69 0 chr13 32622030 32622177 -87662135 + B3A SINE B2 5 152 -46 2 833 432 0 0 0 chr13 32622177 32622225 -87662087 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 833 830 247 69 0 chr13 32622225 32622251 -87662061 + B3A SINE B2 153 189 -9 2 833 277 18 33 66 chr13 32622373 32622434 -87661878 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 2 833 210 286 16 0 chr13 32623248 32623311 -87661001 + (CATA)n Simple_repeat Simple_repeat 3 66 0 2 833 437 333 43 0 chr13 32623601 32623742 -87660570 - MER63A DNA AcHobo -27 183 37 2 833 406 288 64 17 chr13 32624609 32624782 -87659530 - MER44B DNA MER2_type -3 547 367 2 833 455 261 17 0 chr13 32624785 32624900 -87659412 - MER44B DNA MER2_type -434 116 1 2 833 1226 242 90 13 chr13 32625512 32625813 -87658499 + ORR1D2 LTR MaLR 45 368 -2 2 833 760 320 45 20 chr13 32625816 32626170 -87658142 - MLT1A0 LTR MaLR 0 365 3 2 833 1865 159 129 60 chr13 32626865 32627015 -87657297 - RMER16 LTR ERVK 0 533 396 2 833 3314 30 3 3 chr13 32627015 32627380 -87656932 - RLTR10B2 LTR ERVK 0 365 1 2 833 1865 159 129 60 chr13 32627380 32627663 -87656649 - RMER16 LTR ERVK -138 395 70 2 833 427 328 47 38 chr13 32627680 32627997 -87656315 + LTR85b LTR Gypsy? 452 771 -13 2 833 423 0 0 0 chr13 32628641 32628688 -87655624 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 833 252 0 0 0 chr13 32628688 32628715 -87655597 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 833 486 49 0 0 chr13 32628984 32629045 -87655267 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 833 834 258 10 30 chr13 32629114 32629314 -87654998 - B3 SINE B2 -20 196 1 2 833 565 332 18 31 chr13 32629355 32629582 -87654730 + Tigger5 DNA MER2_type 2137 2360 -46 2 833 778 76 34 8 chr13 32629606 32629725 -87654587 - MTB_Mm LTR MaLR -1 406 285 2 833 3033 162 21 44 chr13 32629724 32630298 -87654014 + RMER4B LTR ERVK 25 585 0 2 833 660 177 13 54 chr13 32630379 32630528 -87653784 - Lx2A LINE L1 0 7008 6866 2 833 289 275 95 68 chr13 32631936 32632084 -87652228 - L1MB3 LINE L1 -18 6165 6014 2 833 3574 29 60 17 chr13 32632838 32633256 -87651056 + RLTR10C LTR ERVK 1 436 0 2 833 279 79 0 0 chr13 32634215 32634253 -87650059 + (GGAGAA)n Simple_repeat Simple_repeat 6 43 0 2 833 315 0 0 0 chr13 32634422 32634457 -87649855 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 833 417 218 0 37 chr13 32634472 32634553 -87649759 - B4A SINE B4 -213 79 2 2 833 581 27 13 0 chr13 32634576 32634651 -87649661 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 2 833 411 297 122 7 chr13 32634694 32634833 -87649479 - RSINE1 SINE B4 -9 156 2 2 833 237 329 40 0 chr13 32635077 32635153 -87649159 - MIRc SINE MIR -85 183 105 2 833 1027 192 73 34 chr13 32635287 32635492 -87648820 + B3 SINE B2 3 215 -1 2 833 265 341 7 7 chr13 32635978 32636114 -87648198 + CT-rich Low_complexity Low_complexity 3 138 0 2 833 203 325 8 17 chr13 32636185 32636304 -87648008 + CT-rich Low_complexity Low_complexity 4 121 0 2 833 304 339 61 125 chr13 32636573 32636886 -87647426 - ORR1E LTR MaLR -66 293 1 2 834 204 131 56 28 chr13 32637627 32637698 -87646614 + (TTATA)n Simple_repeat Simple_repeat 5 77 0 2 834 423 0 0 0 chr13 32638650 32638697 -87645615 + (CTCA)n Simple_repeat Simple_repeat 3 49 0 2 834 182 231 0 25 chr13 32641705 32641745 -87642567 - MIR SINE MIR -148 114 76 2 834 790 118 0 52 chr13 32642509 32642643 -87641669 + B1_Mur4 SINE Alu 23 149 -1 2 834 227 125 42 0 chr13 32642645 32642693 -87641619 + (CAAA)n Simple_repeat Simple_repeat 3 52 0 2 834 617 309 20 59 chr13 32642705 32642908 -87641404 + B3A SINE B2 2 196 -2 2 834 751 261 67 116 chr13 32643085 32643431 -87640881 + ORR1E LTR MaLR 10 338 -21 2 834 812 222 115 31 chr13 32643713 32643904 -87640408 - B3 SINE B2 -7 209 3 2 834 822 286 156 26 chr13 32644115 32644646 -87639666 - L1ME2z LINE L1 -14 6430 5831 2 834 252 0 0 0 chr13 32644737 32644765 -87639547 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 834 658 203 62 15 chr13 32644788 32644918 -87639394 + B1_Mur1 SINE Alu 13 148 -1 2 834 195 114 0 0 chr13 32644921 32644956 -87639356 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 834 1225 68 7 0 chr13 32646429 32646575 -87637737 - B1_Mm SINE Alu 0 147 1 2 834 278 264 157 32 chr13 32646759 32646941 -87637371 + MIR SINE MIR 40 244 -18 2 834 445 268 104 111 chr13 32648106 32648404 -87635908 - MER44A DNA MER2_type -35 304 9 2 834 448 254 34 8 chr13 32648509 32648628 -87635684 + MIRc SINE MIR 32 153 -115 2 834 21 0 0 0 chr13 32649478 32649499 -87634813 + AT_rich Low_complexity Low_complexity 1 21 0 2 834 287 231 141 32 chr13 32649884 32649993 -87634319 - B1F SINE Alu -101 210 20 2 834 596 261 74 15 chr13 32650167 32650369 -87633943 - MER58B DNA MER1_type -15 326 113 2 834 234 91 0 0 chr13 32650888 32650921 -87633391 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 834 588 14 0 0 chr13 32650921 32650989 -87633323 + (GA)n Simple_repeat Simple_repeat 1 69 0 2 834 313 195 11 44 chr13 32651956 32652047 -87632265 - L1MC LINE L1 -2445 5437 5350 2 834 263 234 96 123 chr13 32652896 32653042 -87631270 - ORR1E LTR MaLR -33 346 205 2 834 1700 219 42 87 chr13 32653043 32653532 -87630780 + RLTR1B LTR ERV1 1 512 0 2 834 376 321 30 42 chr13 32653541 32653707 -87630605 - ORR1E LTR MaLR -185 174 11 2 834 698 258 93 0 chr13 32655801 32655995 -87628317 - B3 SINE B2 0 216 5 2 834 488 297 25 0 chr13 32656222 32656340 -87627972 - B4A SINE B4 -105 187 67 2 834 939 239 172 11 chr13 32656345 32656684 -87627628 - MTD LTR MaLR -1 420 1 2 834 1892 216 65 22 chr13 32656963 32657365 -87626947 - MTD LTR MaLR 0 419 1 2 834 242 224 195 23 chr13 32657742 32657829 -87626483 + MTEa LTR MaLR 278 379 0 2 834 196 102 20 20 chr13 32657848 32657898 -87626414 + (CAAAA)n Simple_repeat Simple_repeat 4 53 0 2 834 487 284 146 35 chr13 32657898 32658325 -87625987 - L1MC LINE L1 -394 5768 5288 2 834 346 172 0 17 chr13 32661923 32661974 -87622338 + MTEb LTR MaLR 2 52 -327 2 834 806 265 6 24 chr13 32661974 32662140 -87622172 + RSINE1 SINE B4 3 165 0 2 834 1009 277 61 38 chr13 32662207 32662500 -87621812 + MTEb LTR MaLR 68 367 -12 2 834 434 278 119 61 chr13 32662656 32662983 -87621329 + ORR1E LTR MaLR 10 379 0 2 834 448 191 21 42 chr13 32663164 32663306 -87621006 - RMER17B LTR ERVK -499 459 321 2 834 2690 150 12 5 chr13 32663316 32663738 -87620574 - Lx LINE L1 -16 6638 6214 2 834 238 169 0 106 chr13 32663995 32664042 -87620270 - MLT2B1 LTR ERVL -4 563 522 2 834 1337 235 128 3 chr13 32664042 32664371 -87619941 - ORR1D2 LTR MaLR 0 370 1 2 834 238 169 0 106 chr13 32664371 32664389 -87619923 - MLT2B1 LTR ERVL -46 521 505 2 834 272 234 78 0 chr13 32664453 32664517 -87619795 - MLT2B1 LTR ERVL -76 491 423 2 834 312 401 62 11 chr13 32664826 32665005 -87619307 + LTR16B1 LTR ERVL 1 188 -292 2 834 289 271 44 52 chr13 32665232 32665368 -87618944 + CYRA11_Mm Unknown Y-chromosome 146 280 -337 2 834 695 165 287 23 chr13 32665262 32665436 -87618876 - URR1A DNA MER1_type -5 221 2 2 834 19668 108 219 21 chr13 32665466 32670653 -87613659 + L1_Mus1 LINE L1 261 6636 0 2 834 260 361 12 0 chr13 32670682 32670765 -87613547 + MIR SINE MIR 60 143 -119 2 834 989 248 88 32 chr13 32670805 32671249 -87613063 - L1M3 LINE L1 -739 5429 4958 2 834 388 274 175 15 chr13 32671252 32671452 -87612860 + L1MA9 LINE L1 6081 6312 0 2 834 259 305 87 87 chr13 32671469 32671677 -87612635 - LTR50 LTR ERVL -56 739 532 2 834 819 313 78 49 chr13 32671682 32672068 -87612244 - MLT1C LTR MaLR -32 435 39 2 834 333 276 187 20 chr13 32672253 32672456 -87611856 - LTR50 LTR ERVL -510 285 49 2 834 3320 298 58 43 chr13 32672479 32674267 -87610045 + L1_Mur3 LINE L1 1673 3479 -2401 2 834 435 19 0 0 chr13 32674267 32674319 -87609993 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 834 3320 298 58 43 chr13 32674319 32674534 -87609778 + L1_Mur3 LINE L1 3480 3706 -2174 2 834 417 320 32 83 chr13 32674547 32674765 -87609547 + MTD LTR MaLR 6 212 -207 2 834 1129 109 0 0 chr13 32674956 32675103 -87609209 - B1_Mus1 SINE Alu 0 148 2 2 834 7438 41 2 7 chr13 32676019 32676886 -87607426 + L1Md_F2 LINE L1 5720 6582 0 2 834 1144 217 55 49 chr13 32677207 32677511 -87606801 - L1MB8 LINE L1 -34 6144 5829 2 834 229 237 68 0 chr13 32677535 32677594 -87606718 + MIR SINE MIR 144 206 -56 2 834 1345 170 24 10 chr13 32677917 32678208 -87606104 - BGLII LTR ERVK 0 421 127 2 834 628 186 60 31 chr13 32678215 32678513 -87605799 - RMER3D-int LTR ERVK -2005 837 366 3 834 874 80 0 32 chr13 32678518 32678673 -87605639 - RMER17B LTR ERVK -495 463 314 3 834 622 213 74 37 chr13 32678739 32678929 -87605383 - RMER3D-int LTR ERVK -1994 848 652 3 834 503 117 0 0 chr13 32678944 32679032 -87605280 - RMER3D-int LTR ERVK -2278 564 489 3 834 3249 198 60 46 chr13 32679453 32680346 -87603966 + RMER3D-int LTR ERVK 1891 2796 -46 3 834 4229 62 20 10 chr13 32680349 32680856 -87603456 + RLTR1B LTR ERV1 1 512 0 3 834 706 48 0 0 chr13 32680856 32680940 -87603372 + RLTR1B-int LTR ERV1 1 84 -3215 3 834 3108 67 7 81 chr13 32680985 32681440 -87602872 + BGLII LTR ERVK 1 421 0 3 834 21 0 0 0 chr13 32681451 32681472 -87602840 + AT_rich Low_complexity Low_complexity 1 21 0 3 834 204 40 0 0 chr13 32681705 32681730 -87602582 + (TC)n Simple_repeat Simple_repeat 1 25 0 3 834 217 0 0 57 chr13 32681730 32681764 -87602548 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 834 7377 37 0 0 chr13 32682295 32683157 -87601155 - L1Md_T LINE L1 0 6582 5721 3 834 21 57 0 0 chr13 32683205 32683240 -87601072 + AT_rich Low_complexity Low_complexity 1 35 0 3 834 606 145 70 39 chr13 32683687 32683816 -87600496 - B1_Mus2 SINE Alu -5 142 10 3 834 320 344 178 20 chr13 32684023 32684513 -87599799 + L2a LINE L2 1636 2202 -1217 3 834 598 277 160 55 chr13 32684633 32684958 -87599354 + ORR1E LTR MaLR 1 359 0 3 834 255 278 174 50 chr13 32685047 32685289 -87599023 + L2a LINE L2 2493 2764 -655 3 834 381 300 20 41 chr13 32686004 32686150 -87598162 + L2a LINE L2 3284 3426 0 3 834 357 209 0 173 chr13 32686218 32686322 -87597990 - Tigger5 DNA MER2_type 0 2406 2321 3 834 808 279 34 72 chr13 32686322 32686615 -87597697 + B4A SINE B4 1 282 -10 3 834 441 0 0 0 chr13 32686623 32686672 -87597640 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 834 260 267 130 75 chr13 32687001 32687147 -87597165 + MIRb SINE MIR 77 230 -38 3 834 2252 47 0 0 chr13 32687756 32688013 -87596299 + L1Md_T LINE L1 6326 6582 0 3 834 8227 136 63 10 chr13 32688481 32690034 -87594278 - Lx2 LINE L1 0 6997 5372 3 834 2963 151 14 8 chr13 32690021 32690541 -87593771 + Lx2 LINE L1 4825 5347 -530 3 834 312 27 0 0 chr13 32691137 32691174 -87593138 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 834 405 342 6 26 chr13 32691175 32691331 -87592981 + MLT1B LTR MaLR 208 360 -30 3 834 309 299 13 0 chr13 32694290 32694367 -87589945 - ID4_ SINE ID -4 79 2 3 834 369 0 0 0 chr13 32694826 32694867 -87589445 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 834 185 0 40 0 chr13 32694867 32694892 -87589420 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 834 182 286 247 0 chr13 32695158 32695235 -87589077 + L2b LINE L2 3259 3354 -21 3 834 236 313 158 50 chr13 32695306 32695565 -87588747 + LTR90A LTR LTR 4 290 -686 3 834 204 227 45 0 chr13 32695706 32695772 -87588540 + (CATA)n Simple_repeat Simple_repeat 4 72 0 3 834 405 0 0 0 chr13 32695813 32695858 -87588454 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 834 291 284 64 64 chr13 32696437 32696531 -87587781 + MER5A1 DNA MER1_type 1 94 -72 3 834 602 145 113 0 chr13 32696883 32697014 -87587298 + ORR1C1 LTR MaLR 188 331 -63 3 834 2111 140 28 142 chr13 32697306 32697730 -87586582 - ORR1C1 LTR MaLR 0 378 3 3 834 30 45 0 0 chr13 32698336 32698380 -87585932 + AT_rich Low_complexity Low_complexity 1 44 0 3 834 383 325 23 31 chr13 32699183 32699313 -87584999 + RSINE1 SINE B4 1 129 -36 3 834 35 0 0 0 chr13 32699335 32699370 -87584942 + AT_rich Low_complexity Low_complexity 1 35 0 3 834 302 80 20 0 chr13 32700091 32700141 -87584171 + (TAGA)n Simple_repeat Simple_repeat 1 51 0 3 834 396 40 0 0 chr13 32700593 32700643 -87583669 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 834 284 45 0 43 chr13 32700646 32700693 -87583619 + (CAGAGA)n Simple_repeat Simple_repeat 4 48 0 3 834 985 259 99 19 chr13 32701495 32701817 -87582495 + ORR1D2 LTR MaLR 2 349 -21 3 834 198 71 0 0 chr13 32701819 32701847 -87582465 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 834 318 148 0 0 chr13 32702069 32702123 -87582189 + (TAA)n Simple_repeat Simple_repeat 2 55 0 3 834 361 304 39 0 chr13 32704759 32704861 -87579451 + MER58A DNA MER1_type 2 107 -117 3 834 189 0 0 0 chr13 32705394 32705415 -87578897 + (GTTTG)n Simple_repeat Simple_repeat 3 23 0 3 834 274 336 45 0 chr13 32706613 32706723 -87577589 + MER117 DNA MER1_type 7 121 -76 3 834 735 293 43 27 chr13 32708393 32708658 -87575654 - ORR1E LTR MaLR -112 258 2 3 834 275 337 27 82 chr13 32708826 32708930 -87575382 - L2b LINE L2 0 3375 3278 3 834 3353 41 26 3 chr13 32708930 32709321 -87574991 - MTB LTR MaLR 0 400 1 3 834 181 292 153 0 chr13 32709768 32709840 -87574472 + L2c LINE L2 3287 3369 -18 3 834 225 0 0 0 chr13 32710162 32710187 -87574125 + (A)n Simple_repeat Simple_repeat 1 25 0 3 834 465 283 29 29 chr13 32710279 32710446 -87573866 - L1MC3 LINE L1 -1788 5997 5830 3 834 601 271 41 46 chr13 32710446 32710643 -87573669 - B3A SINE B2 -1 197 2 3 834 465 283 29 29 chr13 32710643 32710679 -87573633 - L1MC3 LINE L1 -1956 5829 5795 3 834 598 281 100 22 chr13 32710687 32710883 -87573429 + MTD LTR MaLR 2 210 -197 3 834 184 30 61 0 chr13 32710986 32711019 -87573293 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3 834 1702 42 0 0 chr13 32711141 32711333 -87572979 - B2_Mm1a SINE B2 0 193 2 3 834 398 289 90 35 chr13 32711438 32711639 -87572673 + RMER15 LTR ERVL 351 562 -13 3 834 259 349 68 8 chr13 32711638 32711771 -87572541 - MLT1D LTR MaLR -362 143 3 3 834 1178 288 90 26 chr13 32711773 32712341 -87571971 - L1MDa LINE L1 -1564 4973 4370 3 834 834 201 129 6 chr13 32712342 32712512 -87571800 + B3 SINE B2 2 192 -24 3 834 1161 201 62 12 chr13 32712642 32712884 -87571428 - Lx5 LINE L1 -131 6919 6666 3 834 333 106 0 0 chr13 32712883 32712930 -87571382 + Lx5 LINE L1 5863 5909 -1141 3 834 986 177 6 0 chr13 32712922 32713086 -87571226 - Lx5 LINE L1 -655 6395 6231 3 834 1133 166 0 6 chr13 32713092 32713274 -87571038 + Lx5 LINE L1 6408 6588 -462 3 834 246 254 43 106 chr13 32713274 32713415 -87570897 - RMER19C LTR ERVK -93 518 387 3 834 738 109 0 0 chr13 32713461 32713571 -87570741 + (TCC)n Simple_repeat Simple_repeat 1 110 0 3 834 401 241 131 0 chr13 32713585 32713722 -87570590 - RMER4B LTR ERVK -430 155 1 3 834 321 328 31 82 chr13 32713774 32713970 -87570342 - L1MDa LINE L1 -2337 4200 4015 3 834 1470 289 104 80 chr13 32714083 32714458 -87569854 - L1MDa LINE L1 -2515 4022 3663 3 834 1088 92 97 6 chr13 32714458 32714633 -87569679 - L1_Mus1 LINE L1 -1 6566 6376 3 834 1470 289 104 80 chr13 32714633 32715471 -87568841 - L1MDa LINE L1 -2875 3662 2780 3 834 4744 209 126 27 chr13 32715536 32716084 -87568228 - Lx9 LINE L1 -6 7638 6996 3 834 2322 118 27 3 chr13 32716084 32716417 -87567895 - Lx2 LINE L1 -3 6994 6654 3 834 4744 209 126 27 chr13 32716417 32716982 -87567330 - Lx9 LINE L1 -649 6995 6416 3 834 2419 234 33 24 chr13 32716980 32717650 -87566662 + L1_Rod LINE L1 4245 4920 -927 3 834 432 264 107 0 chr13 32717666 32717806 -87566506 - Lx8 LINE L1 -450 7023 6869 3 834 295 216 116 9 chr13 32718081 32718193 -87566119 - L1MDa LINE L1 -5151 1482 1359 3 834 3356 185 51 5 chr13 32718196 32718789 -87565523 + Lx5 LINE L1 6359 6978 -72 3 834 489 276 49 20 chr13 32718786 32718989 -87565323 - L1MDa LINE L1 -5427 1206 998 3 834 448 312 118 29 chr13 32719077 32719315 -87564997 - L1MDa LINE L1 -6077 556 298 3 834 738 245 52 75 chr13 32719838 32720186 -87564126 + RLTR15 LTR ERVK 1 340 -19 3 834 302 0 26 0 chr13 32721632 32721670 -87562642 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 834 496 268 7 7 chr13 32721806 32721945 -87562367 - MER57A-int LTR ERV1 -252 5935 5797 3 834 7591 83 23 22 chr13 32723727 32723829 -87560483 - Lx LINE L1 -14 6640 6520 3 834 222 37 0 0 chr13 32723829 32723856 -87560456 + (CCCA)n Simple_repeat Simple_repeat 3 29 0 3 834 7591 83 23 22 chr13 32723856 32724088 -87560224 - Lx LINE L1 -135 6519 6308 3 834 3125 65 5 5 chr13 32724088 32724488 -87559824 + MTB LTR MaLR 1 400 0 3 834 7591 95 25 16 chr13 32724488 32725455 -87558857 - Lx LINE L1 -347 6307 5322 3 834 564 15 0 0 chr13 32725473 32725538 -87558774 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 834 312 27 0 0 chr13 32725539 32725576 -87558736 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 834 387 0 0 0 chr13 32725576 32725618 -87558694 + (GA)n Simple_repeat Simple_repeat 2 44 0 3 834 240 35 0 0 chr13 32726557 32726586 -87557726 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 834 216 0 0 0 chr13 32726613 32726637 -87557675 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 3 834 614 254 0 53 chr13 32726727 32726877 -87557435 + B4 SINE B4 147 288 -4 3 834 365 355 112 20 chr13 32726894 32727294 -87557018 + HERV16-int LTR ERVL 2079 2515 -2481 3 834 465 162 0 0 chr13 32727754 32727865 -87556447 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 3 834 376 306 60 78 chr13 32728262 32728391 -87555921 - MLT1C LTR MaLR -203 264 135 3 834 1670 169 84 34 chr13 32728391 32728747 -87555565 + ORR1D1 LTR MaLR 1 374 0 3 834 376 306 60 78 chr13 32728747 32728855 -87555457 - MLT1C LTR MaLR -333 134 32 3 834 966 119 196 21 chr13 32728855 32729044 -87555268 + URR1A DNA MER1_type 5 226 0 3 834 376 306 60 78 chr13 32729044 32729074 -87555238 - MLT1C LTR MaLR -436 31 2 3 834 3086 26 12 78 chr13 32729394 32729807 -87554505 - RLTR10 LTR ERVK -4 386 1 3 834 16684 34 8 4 chr13 32729809 32731746 -87552566 - RLTR10-int LTR ERVK -3 1984 40 3 834 3120 26 2 112 chr13 32731757 32732193 -87552119 - RLTR10 LTR ERVK -2 388 1 3 834 239 300 212 30 chr13 32733516 32733681 -87550631 - MER20 DNA MER1_type -21 198 4 3 834 249 262 17 108 chr13 32734143 32734263 -87550049 - MTE2b LTR MaLR -5 374 266 3 834 560 260 58 13 chr13 32734275 32734431 -87549881 - MTE2b LTR MaLR -216 163 1 3 834 372 303 132 5 chr13 32734484 32734673 -87549639 + MLT1A1 LTR MaLR 1 213 -195 3 834 286 236 100 36 chr13 32734689 32734727 -87549585 + MLT1A1 LTR MaLR 291 329 -79 3 834 405 0 0 0 chr13 32734727 32734772 -87549540 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 834 286 236 100 36 chr13 32734772 32734843 -87549469 + MLT1A1 LTR MaLR 330 407 -1 3 834 279 0 0 0 chr13 32735722 32735753 -87548559 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 834 209 207 11 0 chr13 32736188 32736275 -87548037 + CT-rich Low_complexity Low_complexity 2 89 0 3 834 198 103 0 0 chr13 32736276 32736305 -87548007 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 834 7163 53 3 0 chr13 32736351 32737205 -87547107 - L1_Mus1 LINE L1 0 6567 5711 3 834 276 153 0 106 chr13 32738016 32738082 -87546230 + B1_Mur4 SINE Alu 2 60 -90 3 834 224 0 0 157 chr13 32738083 32738191 -87546121 + (CAGAG)n Simple_repeat Simple_repeat 5 95 0 3 834 679 122 0 27 chr13 32738194 32738304 -87546008 + B1_Mur3 SINE Alu 42 148 -1 3 834 210 150 0 0 chr13 32738304 32738344 -87545968 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 3 834 370 331 88 54 chr13 32740008 32740302 -87544010 - ORR1E LTR MaLR -11 348 45 4 834 215 61 30 0 chr13 32740463 32740496 -87543816 + (TCCCC)n Simple_repeat Simple_repeat 4 37 0 4 834 326 222 89 49 chr13 32740504 32740627 -87543685 - MER57C2 LTR ERV1 -55 379 252 4 834 281 242 62 21 chr13 32740714 32740811 -87543501 - MER57-int LTR ERV1 -286 7251 7151 4 834 241 374 182 24 chr13 32742773 32742943 -87541369 - Tigger5 DNA MER2_type -2207 199 3 4 834 414 0 0 0 chr13 32743229 32743275 -87541037 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 834 180 0 0 0 chr13 32743278 32743298 -87541014 + (CAG)n Simple_repeat Simple_repeat 1 20 0 4 834 321 349 89 30 chr13 32744060 32744296 -87540016 + L1MC LINE L1 5414 5663 -2219 4 834 671 254 68 38 chr13 32744304 32744541 -87539771 - L1MC3 LINE L1 -572 7213 6970 4 834 599 102 10 39 chr13 32744694 32744796 -87539516 - ORR1A3 LTR MaLR -2 327 228 4 834 3257 195 91 19 chr13 32744802 32745087 -87539225 + RMER17B LTR ERVK 91 413 -545 4 834 504 0 0 0 chr13 32745087 32745143 -87539169 + (TC)n Simple_repeat Simple_repeat 2 57 0 4 834 3257 195 91 19 chr13 32745143 32745663 -87538649 + RMER17B LTR ERVK 414 953 -5 4 834 282 289 60 17 chr13 32745954 32746070 -87538242 - Tigger7 DNA MER2_type -2 2489 2369 4 834 494 319 18 0 chr13 32746073 32746242 -87538070 - Tigger7 DNA MER2_type -2091 400 229 4 834 4067 40 0 0 chr13 32746289 32746761 -87537551 - L1Md_F2 LINE L1 -92 6490 6019 4 834 512 285 13 34 chr13 32747079 32747228 -87537084 + RSINE1 SINE B4 2 147 -18 4 834 312 70 0 0 chr13 32747240 32747283 -87537029 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 834 327 85 0 0 chr13 32747498 32747545 -87536767 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 834 242 300 74 53 chr13 32747606 32747701 -87536611 - MTEb LTR MaLR -23 356 260 4 834 1193 266 36 41 chr13 32747903 32748295 -87536017 + RCHARR1 DNA MER1_type 1 390 -584 4 834 597 15 0 0 chr13 32748298 32748366 -87535946 - L1Md_T LINE L1 -566 6016 5949 4 834 4773 42 2 0 chr13 32748366 32748933 -87535379 + L1Md_T LINE L1 6014 6581 -1 4 834 222 367 0 0 chr13 32749177 32749267 -87535045 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 834 712 306 27 37 chr13 32749267 32749562 -87534750 - B4 SINE B4 0 292 1 4 834 189 0 0 0 chr13 32749780 32749801 -87534511 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 834 1472 177 67 3 chr13 32749801 32750146 -87534166 + RCHARR1 DNA MER1_type 459 825 -149 4 834 414 0 0 0 chr13 32750152 32750198 -87534114 + (TTA)n Simple_repeat Simple_repeat 2 47 0 4 834 311 162 50 0 chr13 32750338 32750418 -87533894 + RCHARR1 DNA MER1_type 824 907 -67 4 834 233 267 40 13 chr13 32750563 32750639 -87533673 - ID2 SINE ID -4 79 2 4 834 22 35 0 0 chr13 32750743 32750772 -87533540 + AT_rich Low_complexity Low_complexity 1 29 0 4 834 1460 238 36 19 chr13 32750784 32750980 -87533332 - ORR1D1 LTR MaLR -3 371 177 4 834 579 29 0 0 chr13 32750980 32751049 -87533263 + (GA)n Simple_repeat Simple_repeat 2 70 0 4 834 1460 238 36 19 chr13 32751049 32751217 -87533095 - ORR1D1 LTR MaLR -198 176 1 4 834 475 268 26 9 chr13 32751320 32751433 -87532879 + RSINE1 SINE B4 13 127 -38 4 834 423 56 0 0 chr13 32751451 32751505 -87532807 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 834 363 112 25 12 chr13 32751742 32751823 -87532489 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 834 233 285 44 53 chr13 32752334 32752503 -87531809 - MIR3 SINE MIR -23 185 18 4 834 469 272 118 16 chr13 32752991 32753178 -87531134 - MER2 DNA MER2_type -53 292 87 4 834 428 35 17 0 chr13 32753483 32753541 -87530771 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 4 834 216 0 0 0 chr13 32753838 32753862 -87530450 + (A)n Simple_repeat Simple_repeat 1 24 0 4 834 183 325 13 13 chr13 32754048 32754126 -87530186 + MIR SINE MIR 12 89 -173 4 834 988 222 195 66 chr13 32754447 32754572 -87529740 + ORR1E LTR MaLR 1 175 -184 4 834 518 0 16 0 chr13 32754572 32754634 -87529678 + (TC)n Simple_repeat Simple_repeat 2 64 0 4 834 988 222 195 66 chr13 32754634 32754826 -87529486 + ORR1E LTR MaLR 176 358 -1 4 834 674 280 70 20 chr13 32754904 32755206 -87529106 + L1MC2 LINE L1 5857 6173 -171 4 834 888 67 0 0 chr13 32755733 32755853 -87528459 + (GA)n Simple_repeat Simple_repeat 2 121 0 4 834 489 17 0 0 chr13 32756672 32756730 -87527582 + (TG)n Simple_repeat Simple_repeat 2 59 0 4 834 306 316 110 28 chr13 32757138 32757356 -87526956 + MLT1E2 LTR MaLR 4 239 -385 4 834 407 304 43 33 chr13 32757401 32757612 -87526700 + B4 SINE B4 3 215 -77 4 834 244 111 37 0 chr13 32757698 32757752 -87526560 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 834 363 23 0 0 chr13 32757752 32757796 -87526516 + (GA)n Simple_repeat Simple_repeat 2 45 0 4 834 472 289 16 55 chr13 32757844 32758027 -87526285 + ORR1E LTR MaLR 2 177 -182 4 834 378 364 30 61 chr13 32758156 32758387 -87525925 + MLT1E2 LTR MaLR 323 546 -81 4 834 555 334 74 3 chr13 32758483 32758792 -87525520 + MER2 DNA MER2_type 3 333 -12 4 834 261 264 108 21 chr13 32759098 32759191 -87525121 + MER96B DNA hAT 1 101 -316 4 834 396 264 86 25 chr13 32759494 32759755 -87524557 - L1MC2 LINE L1 -1675 6110 5832 4 834 235 250 18 0 chr13 32761549 32761605 -87522707 - ID4 SINE ID -24 59 3 4 834 189 0 0 0 chr13 32762276 32762297 -87522015 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 834 396 0 0 0 chr13 32762714 32762758 -87521554 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 4 834 6839 228 59 25 chr13 32764083 32765650 -87518662 - Lx6 LINE L1 0 7460 5840 4 834 270 169 119 0 chr13 32765702 32765761 -87518551 - tRNA-Ala-GCY_ tRNA tRNA -8 67 2 4 834 2557 286 88 17 chr13 32765970 32766920 -87517392 + Lx8 LINE L1 6454 7471 -2 4 834 23 54 0 0 chr13 32766920 32766957 -87517355 + AT_rich Low_complexity Low_complexity 1 37 0 4 834 293 230 0 39 chr13 32766991 32767068 -87517244 + B1F SINE Alu 76 149 0 4 834 321 197 83 14 chr13 32767072 32767144 -87517168 + ID4_ SINE ID 4 80 -3 4 834 1043 269 46 28 chr13 32767224 32767507 -87516805 - B4A SINE B4 -4 288 1 4 835 567 19 112 0 chr13 32768441 32768548 -87515764 + (TCTCTG)n Simple_repeat Simple_repeat 2 120 0 4 835 535 239 50 6 chr13 32768635 32768795 -87515517 + MER20 DNA MER1_type 1 167 -52 4 835 247 318 0 0 chr13 32769530 32769593 -87514719 + polypyrimidine Low_complexity Low_complexity 1 63 0 4 835 31 0 0 0 chr13 32770560 32770591 -87513721 + AT_rich Low_complexity Low_complexity 1 31 0 4 835 396 284 33 33 chr13 32770599 32770719 -87513593 - ID_B1 SINE B4 -12 212 93 4 835 893 168 0 6 chr13 32771268 32771448 -87512864 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 4 835 242 234 15 15 chr13 32771450 32771515 -87512797 - PB1D10 SINE Alu -32 85 21 4 835 256 390 43 0 chr13 32771630 32771771 -87512541 + MIRb SINE MIR 23 169 -99 4 835 22 0 0 0 chr13 32773106 32773128 -87511184 + AT_rich Low_complexity Low_complexity 1 22 0 4 835 281 240 40 0 chr13 32773984 32774059 -87510253 + ID_B1 SINE B4 144 221 -3 4 835 737 261 144 0 chr13 32774187 32774375 -87509937 - B3 SINE B2 -1 215 1 4 835 1669 85 4 52 chr13 32774687 32774959 -87509353 - Lx LINE L1 0 6654 6396 4 835 523 322 136 4 chr13 32775025 32775335 -87508977 - L1MB2 LINE L1 -193 5978 5622 4 835 4412 39 12 0 chr13 32776713 32777229 -87507083 - L1Md_F2 LINE L1 -14 6568 6047 4 835 1465 153 74 53 chr13 32777468 32777597 -87506715 + ORR1B1 LTR MaLR 41 158 -236 4 835 324 0 0 0 chr13 32777597 32777633 -87506679 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 835 1583 153 74 53 chr13 32777633 32777842 -87506470 + ORR1B1 LTR MaLR 159 386 -8 4 835 444 37 0 0 chr13 32777874 32777928 -87506384 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 835 263 318 50 56 chr13 32779487 32779647 -87504665 + L1ME1 LINE L1 5925 6083 -96 4 835 323 244 72 55 chr13 32780645 32780756 -87503556 + B3 SINE B2 51 153 -40 4 835 1042 218 21 0 chr13 32781157 32781345 -87502967 + B3A SINE B2 1 192 -6 4 835 928 247 47 29 chr13 32782333 32782608 -87501704 + RLTR41 LTR ERV1 166 445 -1 4 835 219 103 0 0 chr13 32782716 32782755 -87501557 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 4 835 477 80 0 0 chr13 32782783 32782858 -87501454 + (CAGAGA)n Simple_repeat Simple_repeat 3 77 0 4 835 202 188 0 0 chr13 32782988 32783020 -87501292 + (CTG)n Simple_repeat Simple_repeat 2 33 0 4 835 278 299 78 54 chr13 32783267 32783433 -87500879 + MIRb SINE MIR 80 249 -19 4 835 407 324 56 42 chr13 32783754 32784038 -87500274 + L1M5 LINE L1 2980 3267 -2879 4 835 1068 278 60 33 chr13 32784138 32784502 -87499810 + MTE2b LTR MaLR 2 375 -4 4 835 416 341 126 36 chr13 32784522 32785024 -87499288 + L1M4 LINE L1 273 819 -5723 4 835 28 29 0 0 chr13 32785056 32785091 -87499221 + AT_rich Low_complexity Low_complexity 1 35 0 4 835 534 314 113 60 chr13 32787283 32787618 -87496694 + MLT1F-int LTR MaLR 18 370 -1119 4 835 642 135 0 0 chr13 32787954 32788058 -87496254 + (GGA)n Simple_repeat Simple_repeat 2 105 0 4 835 641 321 71 35 chr13 32788351 32788958 -87495354 + L1_Rod LINE L1 1363 2034 -3813 4 835 291 114 0 0 chr13 32788993 32789037 -87495275 + (GGAA)n Simple_repeat Simple_repeat 2 45 0 4 835 511 331 209 37 chr13 32789038 32789365 -87494947 + MLT1F-int LTR MaLR 498 929 -560 4 835 1787 55 23 0 chr13 32789365 32789582 -87494730 + L1Md_F2 LINE L1 6348 6569 -13 4 835 331 370 45 64 chr13 32789582 32789603 -87494709 + MLT1F-int LTR MaLR 881 902 -469 4 835 189 0 0 0 chr13 32790484 32790505 -87493807 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 4 835 451 297 20 13 chr13 32790657 32790807 -87493505 + LTR82B Low_complexity ERVL 217 367 -463 4 835 335 218 4 52 chr13 32790838 32790921 -87493391 - PB1 SINE Alu -44 83 6 4 835 349 297 29 112 chr13 32790939 32791144 -87493168 + LTR82B Low_complexity ERVL 362 549 -281 4 835 258 278 0 0 chr13 32793232 32793286 -87491026 + tRNA-Ala-GCY_ tRNA tRNA 13 66 -9 4 835 638 187 7 0 chr13 32793289 32793439 -87490873 + GA-rich Low_complexity Low_complexity 3 153 0 4 835 576 125 0 0 chr13 32795047 32795143 -87489169 + (GGA)n Simple_repeat Simple_repeat 2 97 0 4 835 1263 83 0 0 chr13 32795143 32795347 -87488965 + (GAA)n Simple_repeat Simple_repeat 1 204 0 4 835 710 267 7 14 chr13 32795888 32796036 -87488276 + B1_Mur1 SINE Alu 3 149 0 5 835 747 22 0 0 chr13 32796444 32796533 -87487779 + (GA)n Simple_repeat Simple_repeat 1 89 0 5 835 742 295 85 29 chr13 32797440 32797747 -87486565 - MER2 DNA MER2_type -20 325 2 5 835 519 17 0 0 chr13 32798123 32798183 -87486129 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 835 305 329 0 0 chr13 32798193 32798275 -87486037 - ID4_ SINE ID 0 83 2 5 835 254 329 13 0 chr13 32798292 32798368 -87485944 - B1_Mur1 SINE Alu -8 141 65 5 835 25 0 0 0 chr13 32798385 32798410 -87485902 + AT_rich Low_complexity Low_complexity 1 25 0 5 835 630 0 0 0 chr13 32799499 32799569 -87484743 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 835 390 219 11 48 chr13 32799798 32800023 -87484289 + (GTGTG)n Simple_repeat Simple_repeat 1 216 0 5 835 203 262 47 0 chr13 32799999 32800148 -87484164 + (ATGTG)n Simple_repeat Simple_repeat 3 158 0 5 835 252 273 79 11 chr13 32802582 32802671 -87481641 + MER46C DNA MER2_type 244 338 0 5 835 423 0 0 0 chr13 32805075 32805122 -87479190 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 5 835 1306 62 0 0 chr13 32805122 32805282 -87479030 - B2_Mm1t SINE B2 -33 160 1 5 835 335 279 150 44 chr13 32806467 32806492 -87477820 - CYRA11_Mm Unknown Y-chromosome -207 410 367 5 835 813 139 200 0 chr13 32806492 32806657 -87477655 + URR1B DNA MER1_type 1 198 -27 5 835 290 156 0 72 chr13 32806657 32806726 -87477586 + URR1B DNA MER1_type 162 225 0 5 835 656 184 18 0 chr13 32806795 32806904 -87477408 + B1_Mur4 SINE Alu 2 112 -38 5 835 292 246 38 53 chr13 32812023 32812117 -87472195 + AluG_3 SINE Alu 147 221 -90 5 835 489 34 0 0 chr13 32812122 32812181 -87472131 + (GA)n Simple_repeat Simple_repeat 2 60 0 5 835 951 35 0 0 chr13 32812568 32812683 -87471629 + (TG)n Simple_repeat Simple_repeat 1 115 0 5 835 222 212 0 88 chr13 32813143 32813200 -87471112 - ID4_ SINE ID -17 66 15 5 835 424 276 276 0 chr13 32813343 32813542 -87470770 + Tigger7 DNA MER2_type 2228 2481 -10 5 835 763 10 21 0 chr13 32814908 32815004 -87469308 + (TC)n Simple_repeat Simple_repeat 1 98 0 5 835 323 325 75 118 chr13 32815764 32816019 -87468293 - ORR1E LTR MaLR -49 310 67 5 835 261 320 40 0 chr13 32817048 32817123 -87467189 + ID4 SINE ID 1 78 -5 5 835 195 42 0 0 chr13 32817685 32817709 -87466603 + (TTTTTG)n Simple_repeat Simple_repeat 6 29 0 5 835 545 202 52 17 chr13 32817709 32817825 -87466487 - PB1D9 SINE Alu 0 120 1 5 835 420 195 22 33 chr13 32818088 32818178 -87466134 + B4A SINE B4 3 91 -201 5 835 231 287 26 106 chr13 32818237 32818308 -87466004 + B3 SINE B2 113 185 -31 5 835 274 80 20 20 chr13 32818308 32818359 -87465953 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 835 231 287 26 106 chr13 32818359 32818400 -87465912 + B3 SINE B2 186 216 0 5 835 606 145 40 0 chr13 32818401 32818553 -87465759 + (TAGA)n Simple_repeat Simple_repeat 3 160 0 5 835 220 229 0 24 chr13 32819909 32819994 -87464318 + GA-rich Low_complexity Low_complexity 3 85 0 5 835 289 309 78 32 chr13 32821072 32821226 -87463086 - MER20 DNA MER1_type -8 211 51 5 835 227 306 16 0 chr13 32822368 32822430 -87461882 + (TGG)n Simple_repeat Simple_repeat 2 64 0 5 835 230 194 15 0 chr13 32822437 32822504 -87461808 + (ATG)n Simple_repeat Simple_repeat 2 69 0 5 835 411 167 20 30 chr13 32824178 32824277 -87460035 - Lx4B LINE L1 -5 7053 6956 5 835 9020 29 1 0 chr13 32824670 32825650 -87458662 + L1Md_F2 LINE L1 5602 6582 0 5 835 615 290 6 19 chr13 32825961 32826119 -87458193 - RSINE1 SINE B4 -6 159 4 5 835 641 83 0 20 chr13 32826701 32826799 -87457513 + (TCCC)n Simple_repeat Simple_repeat 3 98 0 5 835 561 30 0 0 chr13 32826801 32826868 -87457444 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 5 835 218 317 0 0 chr13 32826868 32826909 -87457403 - ID SINE ID -151 73 33 5 835 961 238 44 0 chr13 32827257 32827463 -87456849 - B3 SINE B2 -1 215 1 5 835 3909 166 172 49 chr13 32827501 32828304 -87456008 + RMER19B LTR ERVK 1 902 0 5 835 180 0 0 0 chr13 32828387 32828407 -87455905 + (A)n Simple_repeat Simple_repeat 1 20 0 5 835 687 44 0 0 chr13 32829772 32829863 -87454449 + (TAAA)n Simple_repeat Simple_repeat 4 94 0 5 835 281 261 29 0 chr13 32829914 32829983 -87454329 + MER5A1 DNA MER1_type 1 71 -95 5 835 198 103 0 0 chr13 32830057 32830086 -87454226 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 5 835 367 173 161 0 chr13 32830105 32830186 -87454126 + MER5A1 DNA MER1_type 67 160 -6 5 835 839 310 96 17 chr13 32830645 32830947 -87453365 - MER2 DNA MER2_type -12 333 8 5 835 265 311 27 54 chr13 32831536 32831648 -87452664 + PB1 SINE Alu 1 109 -18 5 835 305 286 29 135 chr13 32832350 32832389 -87451923 + MT2B LTR ERVL 127 147 -454 5 835 829 181 0 57 chr13 32832389 32832547 -87451765 + B1_Mur4 SINE Alu 2 150 0 5 835 262 303 118 52 chr13 32832628 32832901 -87451411 - ORR1D1 LTR MaLR -48 322 24 5 835 515 298 52 19 chr13 32834557 32834678 -87449634 + RSINE1 SINE B4 3 124 -41 5 835 279 0 0 0 chr13 32834678 32834709 -87449603 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 835 333 0 0 0 chr13 32834709 32834745 -87449567 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 835 515 298 52 19 chr13 32834745 32834776 -87449536 + RSINE1 SINE B4 125 160 -5 5 835 318 225 0 0 chr13 32834781 32834892 -87449420 + (CA)n Simple_repeat Simple_repeat 2 112 0 5 835 742 245 146 8 chr13 32835868 32836115 -87448197 - B4A SINE B4 -10 282 2 5 835 722 238 212 13 chr13 32836525 32836751 -87447561 + B4A SINE B4 4 274 -18 5 835 522 0 0 0 chr13 32836756 32836814 -87447498 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 835 328 227 61 10 chr13 32838054 32838153 -87446159 + B1_Mur2 SINE Alu 1 148 -1 5 835 461 348 59 22 chr13 32838176 32838311 -87446001 + RSINE1 SINE B4 2 141 -24 5 835 25 31 0 0 chr13 32838330 32838362 -87445950 + AT_rich Low_complexity Low_complexity 1 32 0 5 835 308 309 83 0 chr13 32838363 32838447 -87445865 + B4 SINE B4 82 172 -120 5 835 188 163 0 23 chr13 32838484 32838528 -87445784 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 835 3583 36 17 0 chr13 32838606 32839017 -87445295 + L1Md_F3 LINE L1 6167 6584 0 5 835 353 293 80 16 chr13 32839238 32839363 -87444949 + ORR1E LTR MaLR 1 133 -226 5 835 3304 72 14 0 chr13 32839394 32839808 -87444504 - L1_Mus3 LINE L1 -10 6628 6209 5 835 24 0 0 0 chr13 32840180 32840204 -87444108 + AT_rich Low_complexity Low_complexity 1 24 0 5 835 433 285 85 45 chr13 32840710 32840956 -87443356 + L1MB3 LINE L1 5414 5669 -502 5 835 1980 164 86 5 chr13 32840967 32841341 -87442971 - MTD LTR MaLR -15 404 1 5 835 875 259 72 72 chr13 32841368 32841810 -87442502 + L1MB3 LINE L1 5702 6143 -40 5 835 590 222 0 0 chr13 32841812 32841911 -87442401 + PB1D7 SINE Alu 5 103 -17 5 835 276 326 44 11 chr13 32841968 32842058 -87442254 + MIRc SINE MIR 41 133 -135 5 835 218 246 44 44 chr13 32843219 32843287 -87441025 - MIRc SINE MIR -198 70 3 5 835 22 35 0 0 chr13 32843889 32843918 -87440394 + AT_rich Low_complexity Low_complexity 1 29 0 5 835 222 341 12 12 chr13 32844961 32845045 -87439267 - BC1_Mm scRNA scRNA -68 84 1 5 835 211 266 31 0 chr13 32845457 32845521 -87438791 + GA-rich Low_complexity Low_complexity 4 69 0 5 835 331 353 76 27 chr13 32845688 32845912 -87438400 + HAL1 LINE L1 1553 1787 -720 5 835 243 361 64 14 chr13 32845978 32846197 -87438115 + HAL1 LINE L1 1898 2127 -380 5 835 624 67 0 0 chr13 32846284 32846374 -87437938 + (TG)n Simple_repeat Simple_repeat 1 90 0 5 835 32 67 0 0 chr13 32846630 32846690 -87437622 + AT_rich Low_complexity Low_complexity 1 60 0 5 835 934 274 14 5 chr13 32846802 32847011 -87437301 - B3 SINE B2 -5 211 1 5 835 435 240 19 37 chr13 32850070 32850178 -87434134 + U6 snRNA snRNA 1 106 -1 5 835 227 257 128 37 chr13 32850184 32850293 -87434019 + Lx8 LINE L1 7353 7471 -2 5 835 296 280 52 26 chr13 32850618 32850695 -87433617 + ID4 SINE ID 3 81 -2 5 835 431 203 0 0 chr13 32854031 32854095 -87430217 - PB1D9 SINE Alu -54 66 3 5 835 194 62 31 0 chr13 32856919 32856951 -87427361 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 835 247 357 82 18 chr13 32858045 32858216 -87426096 - MIRb SINE MIR -34 234 53 5 835 202 325 107 33 chr13 32859551 32859672 -87424640 - MIRb SINE MIR -87 181 52 5 835 336 259 12 0 chr13 32860029 32860110 -87424202 + ID2 SINE ID 2 83 0 5 835 332 241 72 0 chr13 32860398 32860481 -87423831 + L1MC2 LINE L1 6059 6147 -197 5 835 291 291 13 0 chr13 32860539 32860618 -87423694 + L1MC2 LINE L1 6239 6318 -15 5 835 214 321 109 74 chr13 32860725 32860823 -87423489 + MIRb SINE MIR 86 195 -73 5 835 279 0 0 0 chr13 32860823 32860854 -87423458 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 835 366 23 0 0 chr13 32860854 32860896 -87423416 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 835 214 321 109 74 chr13 32860896 32860971 -87423341 + MIRb SINE MIR 196 265 -3 5 835 351 0 0 0 chr13 32862429 32862468 -87421844 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 835 585 272 141 96 chr13 32863141 32863495 -87420817 - MTE2a LTR MaLR -9 370 1 5 835 358 220 151 21 chr13 32863883 32863976 -87420336 - PB1D9 SINE Alu -9 111 7 5 835 297 229 40 116 chr13 32863913 32864031 -87420281 - MT2B LTR ERVL -358 226 116 5 835 294 316 63 19 chr13 32864543 32864701 -87419611 + LTR16E2 LTR ERVL 396 560 -8 5 835 790 255 130 22 chr13 32865193 32865470 -87418842 - MER2 DNA MER2_type -13 332 26 5 835 234 258 91 0 chr13 32866805 32866871 -87417441 + ID2 SINE ID 2 73 -10 5 835 919 219 143 17 chr13 32866944 32867181 -87417131 - B4 SINE B4 -21 271 5 5 835 812 241 32 155 chr13 32868975 32869226 -87415086 - ID_B1 SINE B4 -3 221 2 5 835 716 241 14 0 chr13 32871378 32871523 -87412789 + ID_B1 SINE B4 73 219 -5 6 835 513 321 42 24 chr13 32871996 32872162 -87412150 - B3A SINE B2 -47 169 1 6 835 306 252 89 48 chr13 32872261 32872407 -87411905 - RSINE1 SINE B4 -9 156 5 6 835 280 233 0 16 chr13 32873151 32873212 -87411100 - ID4_ SINE ID -19 64 5 6 835 312 48 0 0 chr13 32873829 32873871 -87410441 + (TTTTTA)n Simple_repeat Simple_repeat 2 43 0 6 835 504 48 0 0 chr13 32874402 32874465 -87409847 + (TTTTTG)n Simple_repeat Simple_repeat 3 65 0 6 835 270 260 14 14 chr13 32874753 32874827 -87409485 - ID4_ SINE ID -8 75 2 6 835 369 0 0 0 chr13 32876569 32876610 -87407702 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 835 271 294 108 31 chr13 32877054 32877184 -87407128 - L2 LINE L2 -790 2629 2490 6 835 329 252 268 22 chr13 32877757 32877895 -87406417 + Lx8 LINE L1 6959 7130 -343 6 835 341 234 71 9 chr13 32877972 32878084 -87406228 + Lx8 LINE L1 7355 7473 0 6 835 617 274 161 39 chr13 32878368 32879141 -87405171 + L1MB7 LINE L1 5096 5964 -220 6 835 251 303 0 22 chr13 32879174 32879265 -87405047 + L1MB7 LINE L1 6056 6144 -34 6 835 238 246 56 42 chr13 32879761 32879833 -87404479 + ID4_ SINE ID 3 75 -8 6 835 234 286 16 16 chr13 32880244 32880308 -87404004 + ID4 SINE ID 26 89 -63 6 835 676 23 12 0 chr13 32880371 32880457 -87403855 - L1Md_T LINE L1 0 6582 6496 6 835 494 323 35 52 chr13 32880584 32880953 -87403359 - L1MC4 LINE L1 -371 7671 7309 6 835 207 0 0 0 chr13 32881174 32881197 -87403115 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 6 835 308 237 168 11 chr13 32881328 32881528 -87402784 - L1MC4 LINE L1 -1197 6845 6603 6 835 729 153 43 85 chr13 32882411 32882575 -87401737 - B2_Mm2 SINE B2 -21 174 18 6 835 976 166 14 0 chr13 32882915 32883060 -87401252 - B1_Mur2 SINE Alu -2 147 1 6 835 276 266 75 55 chr13 32883373 32883519 -87400793 + MIRb SINE MIR 113 262 0 6 835 244 292 69 42 chr13 32883834 32884123 -87400189 - L1ME3B LINE L1 -231 6009 5713 6 835 22 0 0 0 chr13 32884374 32884396 -87399916 + AT_rich Low_complexity Low_complexity 1 22 0 6 835 27 0 0 0 chr13 32884451 32884478 -87399834 + AT_rich Low_complexity Low_complexity 1 27 0 6 835 313 197 28 0 chr13 32885270 32885341 -87398971 - L1MD LINE L1 -870 5489 5417 6 835 207 0 0 0 chr13 32885475 32885498 -87398814 + (ATTG)n Simple_repeat Simple_repeat 2 24 0 6 835 390 303 0 10 chr13 32885498 32885587 -87398725 - PB1D7 SINE Alu -27 93 5 6 835 244 259 69 0 chr13 32885940 32885998 -87398314 - LTR88b LTR Gypsy? -126 711 650 6 835 213 121 0 0 chr13 32886370 32886403 -87397909 + (T)n Simple_repeat Simple_repeat 1 33 0 6 835 5118 52 17 0 chr13 32887766 32888368 -87395944 - L1Md_F2 LINE L1 -3 6579 5968 6 835 354 271 52 81 chr13 32888573 32888746 -87395566 - ORR1E LTR MaLR -168 191 24 6 835 2573 134 87 30 chr13 32889519 32890017 -87394295 + RMER2 LTR ERV1 1 530 -37 6 835 279 0 0 0 chr13 32890017 32890048 -87394264 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 835 1591 22 6 0 chr13 32890048 32890227 -87394085 - B2_Mm1t SINE B2 -12 181 2 6 835 32 0 0 0 chr13 32890234 32890266 -87394046 + AT_rich Low_complexity Low_complexity 1 32 0 6 835 744 71 0 0 chr13 32890782 32890881 -87393431 + (GGA)n Simple_repeat Simple_repeat 3 101 0 6 835 426 121 0 0 chr13 32891077 32891143 -87393169 + (T)n Simple_repeat Simple_repeat 1 66 0 6 835 286 283 26 9 chr13 32891738 32891852 -87392460 + RLTR12B LTR ERVK 42 157 -371 6 835 1147 70 0 0 chr13 32891852 32892010 -87392302 + B2_Mm2 SINE B2 1 158 -37 6 835 561 88 0 0 chr13 32892010 32892090 -87392222 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 835 829 272 41 44 chr13 32892102 32892440 -87391872 + RLTR12B LTR ERVK 150 486 -42 6 835 570 222 228 0 chr13 32892823 32892990 -87391322 - B3 SINE B2 -11 205 1 6 835 610 217 17 0 chr13 32893115 32893235 -87391077 - B1_Mur1 SINE Alu -25 124 3 6 835 213 269 0 0 chr13 32894576 32894654 -87389658 + GA-rich Low_complexity Low_complexity 1 78 0 6 835 894 187 26 110 chr13 32896380 32896608 -87387704 + B3 SINE B2 2 210 -6 6 836 404 308 54 14 chr13 32900053 32900201 -87384111 - MER2 DNA MER2_type -1 344 191 6 836 471 221 44 9 chr13 32900284 32900398 -87383914 - MER2 DNA MER2_type -141 204 87 6 836 1093 70 27 14 chr13 32900528 32900674 -87383638 + B1_Mus1 SINE Alu 1 148 0 6 836 324 0 0 0 chr13 32901772 32901808 -87382504 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 836 234 0 0 0 chr13 32901808 32901833 -87382479 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 836 1700 26 0 0 chr13 32902072 32902264 -87382048 + B2_Mm1t SINE B2 2 193 0 6 836 321 26 0 0 chr13 32902311 32902349 -87381963 + (A)n Simple_repeat Simple_repeat 1 38 0 6 836 449 231 77 111 chr13 32902440 32902575 -87381737 - RCHARR1 DNA MER1_type -1 973 850 6 836 991 149 0 0 chr13 32902575 32902723 -87381589 - B1_Mus1 SINE Alu 0 148 1 6 836 449 231 77 111 chr13 32902723 32902821 -87381491 - RCHARR1 DNA MER1_type -125 849 748 6 836 302 162 61 24 chr13 32902818 32902900 -87381412 - RCHARR1 DNA MER1_type -505 469 385 6 836 821 213 18 0 chr13 32902905 32902985 -87381327 + ID SINE ID 1 83 -141 6 836 282 286 111 10 chr13 32902985 32903084 -87381228 + B1F2 SINE Alu 1 109 -40 6 836 543 207 88 7 chr13 32903494 32903630 -87380682 - B1_Mur2 SINE Alu 0 149 3 6 836 618 273 55 14 chr13 32903680 32903825 -87380487 - RSINE1 SINE B4 -13 152 2 6 836 512 279 63 31 chr13 32904007 32904166 -87380146 - RSINE1 SINE B4 0 165 2 6 836 42 36 0 0 chr13 32904222 32904278 -87380034 + AT_rich Low_complexity Low_complexity 1 56 0 6 836 562 285 58 11 chr13 32904294 32904468 -87379844 - B3A SINE B2 -15 183 2 6 836 223 28 27 27 chr13 32904481 32904518 -87379794 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 836 374 351 40 13 chr13 32904520 32904670 -87379642 - RSINE1 SINE B4 -10 155 2 6 836 392 0 0 20 chr13 32905085 32905134 -87379178 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 836 1751 163 99 3 chr13 32906225 32906588 -87377724 + MTD LTR MaLR 14 411 -8 6 836 21 0 0 0 chr13 32906977 32906998 -87377314 + AT_rich Low_complexity Low_complexity 1 21 0 6 836 698 122 0 0 chr13 32909777 32909884 -87374428 + B2_Mm2 SINE B2 1 107 -88 6 836 305 236 40 20 chr13 32913266 32913389 -87370923 - PB1D10 SINE Alu 0 149 22 6 836 333 265 40 20 chr13 32914652 32914752 -87369560 - B1F1 SINE Alu -47 102 1 6 836 1172 69 0 0 chr13 32914889 32915034 -87369278 - B1_Mus2 SINE Alu -2 145 1 6 836 323 202 226 9 chr13 32915465 32915580 -87368732 - HAL1 LINE L1 -881 1626 1487 6 836 372 22 0 0 chr13 32916711 32916756 -87367556 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 6 836 327 232 131 6 chr13 32916776 32916882 -87367430 - B1_Mus2 SINE Alu -3 114 2 6 836 204 143 0 0 chr13 32917365 32917407 -87366905 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 6 836 259 280 53 0 chr13 32917832 32917907 -87366405 + B4 SINE B4 2 80 -212 6 836 570 224 141 42 chr13 32917922 32918149 -87366163 - ORR1D2 LTR MaLR -10 360 122 6 836 469 192 134 16 chr13 32918249 32918376 -87365936 - ORR1D2 LTR MaLR -224 146 3 6 836 858 266 48 82 chr13 32919409 32919898 -87364414 - RLTR11A2 LTR ERVK -35 493 1 6 836 212 158 0 26 chr13 32920346 32920385 -87363927 - B1F1 SINE Alu -99 50 13 6 836 732 294 226 13 chr13 32921365 32921754 -87362558 - MER70A LTR ERVL 0 472 1 6 836 421 327 102 22 chr13 32922659 32922884 -87361428 + B4A SINE B4 1 243 -49 6 836 368 111 16 0 chr13 32922897 32922960 -87361352 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 836 208 321 36 9 chr13 32924867 32924977 -87359335 + MIR SINE MIR 84 196 -66 6 836 270 0 0 0 chr13 32925561 32925591 -87358721 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 836 657 298 138 16 chr13 32925823 32926069 -87358243 + B4 SINE B4 5 280 -12 6 836 249 343 18 71 chr13 32926205 32926318 -87357994 + PB1D10 SINE Alu 3 109 -8 6 836 410 161 60 31 chr13 32926925 32927413 -87356899 + (CTCA)n Simple_repeat Simple_repeat 1 502 0 6 836 209 289 0 0 chr13 32928691 32928743 -87355569 + GA-rich Low_complexity Low_complexity 4 55 0 6 836 238 191 24 0 chr13 32928766 32928808 -87355504 + B3A SINE B2 2 44 -154 6 836 245 176 29 0 chr13 32928808 32928876 -87355436 + (TCTCTG)n Simple_repeat Simple_repeat 2 71 0 6 836 530 316 96 13 chr13 32928877 32929034 -87355278 - B3 SINE B2 -43 173 4 6 836 439 255 161 25 chr13 32929040 32929201 -87355111 + B3 SINE B2 33 215 -1 6 836 225 0 0 0 chr13 32929294 32929319 -87354993 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 836 340 332 87 36 chr13 32929704 32929923 -87354389 - MER2 DNA MER2_type -91 254 25 6 836 1393 181 86 86 chr13 32930236 32930610 -87353702 - ORR1D1 LTR MaLR 0 374 1 6 836 570 285 118 0 chr13 32930699 32930885 -87353427 + B4A SINE B4 3 210 -82 6 836 25 51 0 0 chr13 32931135 32931174 -87353138 + AT_rich Low_complexity Low_complexity 1 39 0 6 836 260 285 122 20 chr13 32931185 32931382 -87352930 - L1MEe LINE L1 -3630 2516 2300 6 836 510 311 40 56 chr13 32931809 32932133 -87352179 - ORR1E LTR MaLR -3 356 38 6 836 339 274 65 24 chr13 32932203 32932371 -87351941 - L1MEe LINE L1 -3958 2208 2034 6 836 227 71 0 0 chr13 32932441 32932469 -87351843 - L1MEe LINE L1 -4352 1890 1863 6 836 283 250 13 0 chr13 32932727 32932803 -87351509 - L1MEe LINE L1 -4435 1807 1731 6 836 670 278 12 53 chr13 32933378 32933625 -87350687 - B4A SINE B4 -53 239 3 6 836 478 155 123 28 chr13 32933709 32933815 -87350497 - B1_Mur4 SINE Alu -8 142 27 6 836 235 0 57 0 chr13 32935527 32935562 -87348750 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 836 381 216 32 13 chr13 32935629 32935784 -87348528 + (TCCA)n Simple_repeat Simple_repeat 4 161 0 6 836 360 0 0 0 chr13 32936078 32936118 -87348194 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 6 836 237 256 165 35 chr13 32936138 32936223 -87348089 + PB1D10 SINE Alu 8 103 -14 6 836 228 35 0 0 chr13 32936232 32936261 -87348051 + (CGAGT)n Simple_repeat Simple_repeat 2 30 0 6 836 441 0 0 0 chr13 32936266 32936315 -87347997 + (AATAG)n Simple_repeat Simple_repeat 1 49 0 7 836 254 268 196 0 chr13 32936321 32936418 -87347894 + MIR SINE MIR 147 262 0 7 836 272 172 17 0 chr13 32936947 32937005 -87347307 + (TAA)n Simple_repeat Simple_repeat 2 60 0 7 836 336 148 163 58 chr13 32938875 32938961 -87345351 - PB1D10 SINE Alu -1 116 22 7 836 23 0 0 0 chr13 32939379 32939402 -87344910 + AT_rich Low_complexity Low_complexity 1 23 0 7 836 614 171 0 8 chr13 32939569 32939693 -87344619 + CT-rich Low_complexity Low_complexity 4 126 0 7 836 576 170 0 26 chr13 32939710 32939825 -87344487 - B1_Mur4 SINE Alu -6 144 33 7 836 606 251 116 58 chr13 32940046 32940321 -87343991 - B4A SINE B4 0 292 2 7 836 423 0 0 0 chr13 32943240 32943287 -87341025 + (TTA)n Simple_repeat Simple_repeat 2 48 0 7 836 716 383 65 11 chr13 32944356 32944821 -87339491 - MLT-int LTR MaLR -183 1552 1063 7 836 497 291 94 14 chr13 32944979 32945254 -87339058 - MLT-int LTR MaLR -897 838 542 7 836 421 149 0 13 chr13 32945286 32945361 -87338951 + RLTR28 LTR ERVL 437 510 -14 7 836 517 227 15 23 chr13 32945382 32945513 -87338799 - L1MA4 LINE L1 -395 5905 5776 7 836 3510 181 35 89 chr13 32945529 32946484 -87337828 + L1_Mur3 LINE L1 2669 3571 -2309 7 836 2273 214 17 21 chr13 32946527 32947046 -87337266 - RLTR20A2 LTR ERVK -15 563 47 7 836 1198 163 0 9 chr13 32947058 32947269 -87337043 + L1_Mur3 LINE L1 4040 4248 -1632 7 836 370 361 77 52 chr13 32947482 32947809 -87336503 - MER2 DNA MER2_type -1 344 10 7 836 1075 216 135 25 chr13 32948111 32948438 -87335874 - ORR1D1 LTR MaLR -11 363 1 7 836 587 255 107 48 chr13 32948527 32948799 -87335513 + B4A SINE B4 3 290 -2 7 836 315 0 0 0 chr13 32948820 32948855 -87335457 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 836 289 289 66 8 chr13 32948881 32949003 -87335309 - L1M5 LINE L1 -1620 4526 4398 7 836 265 338 81 0 chr13 32949764 32949924 -87334388 - LTR89 LTR ERVL? -27 852 680 7 836 35 0 0 0 chr13 32950274 32950309 -87334003 + AT_rich Low_complexity Low_complexity 1 35 0 7 836 639 162 21 0 chr13 32950368 32950510 -87333802 + (TCCA)n Simple_repeat Simple_repeat 4 148 0 7 836 368 253 31 31 chr13 32950833 32950931 -87333381 + PB1D10 SINE Alu 6 103 -14 7 836 246 160 0 0 chr13 32950937 32950987 -87333325 + (AGTAG)n Simple_repeat Simple_repeat 5 54 0 7 836 197 333 149 0 chr13 32950995 32951082 -87333230 + MIR SINE MIR 136 235 -27 7 836 212 241 0 0 chr13 32952067 32952125 -87332187 + ID4 SINE ID 16 73 -10 7 836 213 286 128 39 chr13 32953498 32953600 -87330712 - PB1D10 SINE Alu -1 116 6 7 836 246 62 0 0 chr13 32955695 32955727 -87328585 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 7 836 611 271 126 54 chr13 32956144 32956405 -87327907 + B4A SINE B4 1 280 -12 7 836 240 111 0 0 chr13 32956874 32956910 -87327402 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 836 1660 263 52 18 chr13 32956922 32957476 -87326836 - MER70-int LTR ERVL -1918 3105 2533 7 836 673 256 50 25 chr13 32957595 32957795 -87326517 - MER70-int LTR ERVL -2647 2376 2172 7 836 226 211 115 0 chr13 32957880 32957932 -87326380 - MLT1A1 LTR MaLR -73 335 278 7 836 495 322 0 13 chr13 32957952 32958106 -87326206 + RSINE1 SINE B4 2 153 -12 7 836 300 387 20 60 chr13 32958512 32958663 -87325649 - MLT-int LTR MaLR -444 1291 1147 7 836 352 304 153 9 chr13 32959079 32959308 -87325004 - MLT-int LTR MaLR -932 803 542 7 836 654 49 0 0 chr13 32959310 32959392 -87324920 + (TCCC)n Simple_repeat Simple_repeat 1 82 0 7 836 272 300 29 48 chr13 32959442 32959547 -87324765 - B1F1 SINE Alu -46 103 1 7 836 588 319 102 52 chr13 32959547 32959925 -87324387 - MLT-int LTR MaLR -1197 538 142 7 836 409 262 134 16 chr13 32960066 32960260 -87324052 - MLT1A1 LTR MaLR -36 372 156 7 836 883 158 85 45 chr13 32960260 32960459 -87323853 - MTD LTR MaLR 0 419 213 7 836 1621 205 216 45 chr13 32960463 32961000 -87323312 - Lx7 LINE L1 -6 7690 7062 7 836 211 213 0 0 chr13 32961361 32961408 -87322904 - B1_Mus2 SINE Alu -34 113 67 7 836 3692 148 77 37 chr13 32961580 32962283 -87322029 - Lx4B LINE L1 -8 7050 6320 7 836 2246 172 93 4 chr13 32962344 32962816 -87321496 + RLTR28 LTR ERVL 1 514 -10 7 836 422 250 15 38 chr13 32962829 32962962 -87321350 - L1MA4 LINE L1 -395 5905 5776 7 836 6391 186 87 14 chr13 32962979 32964202 -87320110 + L1_Mur3 LINE L1 2670 3997 -1883 7 836 2620 195 18 114 chr13 32964202 32964878 -87319434 - RMER19C LTR ERVK 0 611 1 7 836 6391 186 87 14 chr13 32964878 32965125 -87319187 + L1_Mur3 LINE L1 3998 4246 -1634 7 836 328 327 87 29 chr13 32965405 32965613 -87318699 - MER2 DNA MER2_type -40 305 86 7 836 1456 186 97 34 chr13 32965977 32966170 -87318142 - ORR1D1 LTR MaLR -1 373 165 7 836 642 37 0 0 chr13 32966170 32966251 -87318061 + (GA)n Simple_repeat Simple_repeat 2 82 0 7 836 1456 186 97 34 chr13 32966251 32966408 -87317904 - ORR1D1 LTR MaLR -210 164 1 7 836 2023 132 110 45 chr13 32966511 32966957 -87317355 + MURVY-LTR LTR ERV1 45 519 0 7 836 5207 162 29 1 chr13 32966957 32967852 -87316460 - Lx3C LINE L1 -62 6914 5995 7 836 270 255 135 26 chr13 32967971 32968164 -87316148 - L1MEe LINE L1 -3632 2514 2301 7 836 587 300 54 95 chr13 32968587 32968955 -87315357 - ORR1E LTR MaLR -1 358 6 7 836 334 267 90 28 chr13 32969004 32969181 -87315131 - L1MEe LINE L1 -3945 2221 2034 7 836 227 71 0 0 chr13 32969256 32969284 -87315028 - L1MEe LINE L1 -4352 1890 1863 7 836 275 0 0 28 chr13 32969373 32969409 -87314903 + (TTA)n Simple_repeat Simple_repeat 2 36 0 7 836 322 261 49 25 chr13 32969553 32969675 -87314637 - L1MEe LINE L1 -4425 1817 1693 7 836 733 280 16 45 chr13 32970247 32970490 -87313822 - B4A SINE B4 -55 237 2 7 836 906 88 0 0 chr13 32970551 32970698 -87313614 + (TG)n Simple_repeat Simple_repeat 2 148 0 7 836 585 193 17 9 chr13 32970698 32970813 -87313499 - B1_Mur4 SINE Alu -9 141 26 7 836 431 78 0 15 chr13 32971705 32971770 -87312542 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 836 223 167 30 0 chr13 32971785 32971851 -87312461 + (TA)n Simple_repeat Simple_repeat 1 68 0 7 836 734 208 0 11 chr13 32973145 32973320 -87310992 + CT-rich Low_complexity Low_complexity 3 175 0 7 836 185 159 23 0 chr13 32974354 32974398 -87309914 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 7 836 226 329 12 12 chr13 32974719 32974805 -87309507 + ID_B1 SINE B4 87 172 -52 7 836 231 170 0 0 chr13 32974821 32974868 -87309444 + (AGTAG)n Simple_repeat Simple_repeat 5 51 0 7 836 320 289 114 0 chr13 32974881 32974995 -87309317 + MIR SINE MIR 136 262 0 7 836 273 57 0 0 chr13 32975521 32975556 -87308756 + (TAA)n Simple_repeat Simple_repeat 2 36 0 7 836 1343 87 16 0 chr13 32977153 32977336 -87306976 - B2_Mm2 SINE B2 -8 187 2 7 836 364 165 167 52 chr13 32977641 32977737 -87306575 - PB1D10 SINE Alu -1 116 10 7 836 1349 175 129 11 chr13 32978229 32978507 -87305805 + Lx4A LINE L1 6743 7053 -5 7 836 261 0 0 0 chr13 32978507 32978536 -87305776 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 7 836 702 35 0 0 chr13 32978621 32978706 -87305606 + (TTCCC)n Simple_repeat Simple_repeat 1 85 0 7 836 225 276 106 38 chr13 32978736 32978868 -87305444 - MT2B2 LTR ERVL -245 339 199 7 836 631 144 0 48 chr13 32978754 32978878 -87305434 - B1_Mur4 SINE Alu 0 150 33 7 836 306 0 0 0 chr13 32979051 32979085 -87305227 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 836 396 0 0 0 chr13 32979085 32979128 -87305184 + (GA)n Simple_repeat Simple_repeat 1 44 0 7 836 605 284 84 22 chr13 32979162 32979436 -87304876 - B4A SINE B4 0 292 2 7 836 7984 111 3 3 chr13 32979449 32980602 -87303710 + Lx2 LINE L1 5844 6997 0 7 836 3723 23 121 0 chr13 32981081 32981521 -87302791 + MT2_Mm LTR ERVL 1 493 0 7 836 48845 17 0 0 chr13 32981521 32986892 -87297420 + MERVL-int LTR ERVL 1 5371 -114 7 836 344 125 26 53 chr13 32986892 32986968 -87297344 + ORR1A3-int LTR MaLR 567 640 -1323 7 836 321 0 0 0 chr13 32986968 32987006 -87297306 + MERVL-int LTR ERVL 5448 5485 0 7 836 3598 17 54 0 chr13 32987006 32987467 -87296845 + MT2_Mm LTR ERVL 1 486 -7 7 836 23 0 0 0 chr13 32987605 32987628 -87296684 + AT_rich Low_complexity Low_complexity 1 23 0 7 836 356 0 23 0 chr13 32990351 32990395 -87293917 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 836 578 272 130 58 chr13 32990808 32991069 -87293243 + B4A SINE B4 1 280 -12 7 836 291 28 0 0 chr13 32991503 32991539 -87292773 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 836 423 0 0 0 chr13 32991974 32992021 -87292291 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 836 189 74 0 0 chr13 32992350 32992377 -87291935 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 836 270 0 0 0 chr13 32992458 32992488 -87291824 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 836 360 0 0 0 chr13 32992488 32992527 -87291785 + (TA)n Simple_repeat Simple_repeat 2 41 0 7 836 569 257 94 11 chr13 32992643 32992824 -87291488 - MER70-int LTR ERVL -2647 2376 2181 7 836 305 270 90 0 chr13 32992833 32992944 -87291368 - MLT1A1 LTR MaLR -10 398 278 7 836 583 323 0 35 chr13 32992964 32993134 -87291178 + RSINE1 SINE B4 2 165 0 7 836 6974 74 35 0 chr13 32993500 32994445 -87289867 + L1_Mus4 LINE L1 5674 6636 0 7 836 325 408 31 26 chr13 32994490 32994719 -87289593 - MLT-int LTR MaLR -444 1291 1062 7 836 448 356 66 84 chr13 32995018 32995518 -87288794 - MLT-int LTR MaLR -203 1532 1042 7 836 585 105 0 0 chr13 32995926 32996012 -87288300 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 7 836 243 0 0 0 chr13 32996055 32996082 -87288230 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7 836 261 123 167 15 chr13 32996082 32996148 -87288164 - B1_Mur4 SINE Alu -10 140 65 7 836 1285 170 353 0 chr13 32996347 32996724 -87287588 + RLTR28 LTR ERVL 1 510 -14 7 836 438 191 46 49 chr13 32996730 32996862 -87287450 - L1MA4 LINE L1 -396 5904 5771 7 836 613 282 20 7 chr13 32996987 32997137 -87287175 - RSINE1 SINE B4 -9 156 5 7 836 1789 176 26 132 chr13 32997139 32997368 -87286944 - RLTR21 LTR ERVK -2 1570 1392 7 836 1980 134 65 0 chr13 32997368 32997675 -87286637 + ORR1A2 LTR MaLR 1 327 0 7 836 1789 176 26 132 chr13 32997675 32997769 -87286543 - RLTR21 LTR ERVK -181 1391 1301 7 836 180 0 0 0 chr13 32997769 32997789 -87286523 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 836 1789 197 41 123 chr13 32997789 32998148 -87286164 - RLTR21 LTR ERVK -254 1318 1057 7 836 357 24 0 0 chr13 32998148 32998190 -87286122 + (CATA)n Simple_repeat Simple_repeat 3 44 0 8 836 909 224 60 110 chr13 32998190 32998376 -87285936 - RLTR21 LTR ERVK -516 1056 895 7 836 762 330 37 35 chr13 32998885 32999261 -87285051 + RLTR17 LTR ERVK 116 492 -200 8 836 282 232 44 44 chr13 32999910 33000000 -87284312 + L1_Mur3 LINE L1 802 891 -6821 8 836 2178 200 52 6 chr13 33000000 33000793 -87283519 + L1_Mur3 LINE L1 908 1741 -4139 1 836 12944 167 51 43 chr13 33000791 33003138 -87281174 + L1_Mur3 LINE L1 2251 4624 -1256 1 836 396 0 0 0 chr13 33003138 33003182 -87281130 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 836 12944 167 51 43 chr13 33003182 33003204 -87281108 + L1_Mur3 LINE L1 4625 4657 -1223 1 836 435 38 0 0 chr13 33003204 33003257 -87281055 + (TAA)n Simple_repeat Simple_repeat 2 54 0 3 836 12944 167 51 43 chr13 33003257 33003312 -87281000 + L1_Mur3 LINE L1 4658 4723 -1157 1 836 315 0 0 0 chr13 33003312 33003347 -87280965 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 836 12944 167 51 43 chr13 33003347 33003781 -87280531 + L1_Mur3 LINE L1 4724 5132 -748 1 836 1106 75 0 14 chr13 33003927 33004062 -87280250 + B1_Mus1 SINE Alu 1 135 -13 5 836 258 32 0 0 chr13 33004062 33004093 -87280219 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 6 836 1106 75 0 14 chr13 33004093 33004105 -87280207 + B1_Mus1 SINE Alu 136 146 -2 5 836 1005 333 39 28 chr13 33004447 33004911 -87279401 - MTE-int LTR MaLR -42 1538 1070 7 836 255 61 0 0 chr13 33005330 33005363 -87278949 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 836 530 308 107 44 chr13 33005375 33005647 -87278665 - B4A SINE B4 -2 290 2 9 836 8314 93 16 7 chr13 33005824 33007058 -87277254 + MusHAL1 LINE L1 829 2073 -639 1 836 3157 179 2 10 chr13 33007055 33007635 -87276677 - L1_Mm LINE L1 -437 5446 4872 1 836 8953 153 40 7 chr13 33007630 33009685 -87274627 + Lx2B LINE L1 4852 6996 -4 1 836 9594 93 73 34 chr13 33009686 33011944 -87272368 + L1VL4 LINE L1 202 2548 -1011 1 836 6322 117 32 1 chr13 33011942 33012858 -87271454 + Lx2 LINE L1 5703 6646 -351 1 836 1300 147 5 9 chr13 33012858 33013078 -87271234 + Lx2 LINE L1 6778 6996 -1 1 836 1839 200 46 28 chr13 33013281 33013781 -87270531 + RLTR11A LTR ERVK 17 525 -3 1 836 662 330 12 29 chr13 33013788 33014028 -87270284 - B4A SINE B4 -56 236 1 1 836 216 158 0 0 chr13 33014448 33014486 -87269826 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 836 553 278 91 20 chr13 33014486 33014684 -87269628 - B4 SINE B4 -80 212 1 1 836 704 310 24 69 chr13 33017620 33018039 -87266273 + L1MA8 LINE L1 5486 5885 -406 1 836 291 250 0 0 chr13 33019697 33019797 -87264515 + (TTG)n Simple_repeat Simple_repeat 2 101 0 2 836 7247 157 71 4 chr13 33021227 33023364 -87260948 - Lx3C LINE L1 -5 6971 4668 2 836 3689 140 16 34 chr13 33023363 33024049 -87260263 - Lx3C LINE L1 -2121 3765 3092 2 836 5329 171 20 2 chr13 33024044 33025394 -87258918 - Lx3C LINE L1 -3648 2238 866 2 836 927 279 122 6 chr13 33027102 33027685 -87256627 - RMER1B Other Other -779 563 65 2 836 279 0 0 0 chr13 33027817 33027848 -87256464 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 836 24 0 0 0 chr13 33028462 33028486 -87255826 + AT_rich Low_complexity Low_complexity 1 24 0 2 836 351 301 46 98 chr13 33028843 33029205 -87255107 - RLTR17 LTR ERVK -251 441 59 2 836 3781 187 72 23 chr13 33029218 33030136 -87254176 - MYSERV16_I-int LTR ERVK -2 2324 1362 2 837 17215 32 50 12 chr13 33032733 33034820 -87249492 - IAPEz-int LTR ERVK -4308 2173 8 2 837 3281 8 3 5 chr13 33034820 33035188 -87249124 - IAPLTR1_Mm LTR ERVK 0 367 1 2 837 249 272 151 8 chr13 33035216 33035342 -87248970 - L1MB7 LINE L1 -192 5992 5849 2 837 558 301 112 26 chr13 33037391 33037785 -87246527 - L1MB7 LINE L1 -445 5739 5315 2 837 201 231 0 37 chr13 33037789 33037828 -87246484 + (CAT)n Simple_repeat Simple_repeat 3 40 0 2 837 348 24 0 0 chr13 33037828 33037869 -87246443 + (TCC)n Simple_repeat Simple_repeat 2 42 0 3 837 201 231 0 37 chr13 33037869 33037883 -87246429 + (CAT)n Simple_repeat Simple_repeat 2 15 0 3 837 5938 57 19 1 chr13 33037892 33038759 -87245553 - L1_Mus1 LINE L1 -107 6531 5588 3 837 3266 16 0 3 chr13 33039435 33039803 -87244509 - IAPLTR1_Mm LTR ERVK 0 367 1 3 837 56792 22 14 1 chr13 33039803 33046169 -87238143 - IAPEz-int LTR ERVK 0 6481 35 3 837 3266 16 0 3 chr13 33046179 33046547 -87237765 - IAPLTR1_Mm LTR ERVK 0 367 1 3 837 591 259 52 0 chr13 33046761 33046896 -87237416 - ETnERV2-int LTR ERVK -204 7202 7061 3 837 569 319 86 25 chr13 33047366 33047700 -87236612 + RLTR26 LTR ERVK 2 376 -266 3 837 322 292 21 0 chr13 33047900 33048006 -87236306 + B1_Mur2 SINE Alu 30 146 -3 3 837 21 36 0 0 chr13 33048860 33048888 -87235424 + AT_rich Low_complexity Low_complexity 1 28 0 3 837 35 0 0 0 chr13 33049301 33049336 -87234976 + AT_rich Low_complexity Low_complexity 1 35 0 3 837 694 199 64 55 chr13 33050189 33050393 -87233919 + RLTR19 LTR ERVK 92 299 -416 4 837 416 279 12 0 chr13 33050400 33050486 -87233826 + ETnERV2-int LTR ERVK 7116 7202 -204 4 837 605 204 95 38 chr13 33050875 33051033 -87233279 + RLTR19 LTR ERVK 256 422 -74 4 837 573 157 14 0 chr13 33051044 33051156 -87233156 - MTC LTR MaLR -136 285 154 4 837 477 90 0 0 chr13 33051189 33051256 -87233056 + (CAAAG)n Simple_repeat Simple_repeat 2 68 0 4 837 261 197 0 0 chr13 33051260 33051331 -87232981 + (CAA)n Simple_repeat Simple_repeat 2 72 0 4 837 3322 191 92 3 chr13 33051712 33051794 -87232518 - Lx3C LINE L1 -6 6994 6896 4 837 768 22 0 0 chr13 33051794 33051884 -87232428 + (TCC)n Simple_repeat Simple_repeat 3 92 0 4 837 3322 185 69 4 chr13 33051884 33052819 -87231493 - Lx3C LINE L1 -87 6913 5798 4 837 248 221 0 13 chr13 33053752 33053830 -87230482 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 837 665 273 104 9 chr13 33054000 33054211 -87230101 + Lx5 LINE L1 6819 7049 -1 4 837 211 268 0 18 chr13 33054645 33054702 -87229610 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 837 405 235 14 150 chr13 33055002 33055142 -87229170 + ID_B1 SINE B4 94 214 -10 5 837 288 111 0 0 chr13 33055241 33055295 -87229017 + (A)n Simple_repeat Simple_repeat 1 54 0 5 837 659 314 103 16 chr13 33055382 33055702 -87228610 - MER31A LTR ERV1 -62 423 76 5 837 230 245 0 0 chr13 33055749 33055798 -87228514 + B1F SINE Alu 96 144 -5 5 837 273 312 0 0 chr13 33056979 33057043 -87227269 + polypurine Low_complexity Low_complexity 3 66 0 5 837 389 277 31 12 chr13 33058513 33058674 -87225638 + MER2 DNA MER2_type 100 263 -82 5 837 381 306 14 29 chr13 33058723 33058861 -87225451 - B4A SINE B4 0 292 157 5 837 393 298 101 6 chr13 33060880 33061049 -87223263 - RMER20B LTR ERVK -263 364 180 5 837 393 261 43 0 chr13 33061518 33061656 -87222656 - MLT1B LTR MaLR -158 232 89 5 837 1386 187 99 6 chr13 33062248 33062561 -87221751 - MTC LTR MaLR -18 403 75 5 837 1434 177 62 125 chr13 33062565 33062977 -87221335 - ORR1B1 LTR MaLR -8 386 1 6 837 248 310 44 44 chr13 33063543 33063678 -87220634 - MER3 DNA MER1_type 0 209 75 6 837 228 320 0 0 chr13 33064458 33064536 -87219776 - ID4 SINE ID -3 80 3 6 837 1135 281 80 5 chr13 33064720 33064739 -87219573 - RCHARR1 DNA MER1_type -505 469 451 6 837 330 26 0 0 chr13 33064739 33064778 -87219534 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 837 1135 281 80 5 chr13 33064778 33065194 -87219118 - RCHARR1 DNA MER1_type -524 450 3 6 837 574 247 12 110 chr13 33065201 33065365 -87218947 + B1F2 SINE Alu 2 149 0 6 837 228 67 0 0 chr13 33065864 33065894 -87218418 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 837 764 316 13 72 chr13 33065897 33066201 -87218111 - B4 SINE B4 -5 287 2 6 837 537 303 89 6 chr13 33066221 33066400 -87217912 - B3A SINE B2 -1 197 4 6 837 771 193 25 6 chr13 33067943 33068105 -87216207 - URR1A DNA MER1_type -16 210 46 6 837 1729 179 67 48 chr13 33068356 33068727 -87215585 + ORR1C1 LTR MaLR 1 378 0 7 837 276 303 71 0 chr13 33069156 33069255 -87215057 - ORR1E LTR MaLR -249 110 5 7 837 449 296 0 25 chr13 33070313 33070431 -87213881 + ID_B1 SINE B4 91 205 -19 7 837 342 283 8 40 chr13 33070941 33071066 -87213246 - ID_B1 SINE B4 0 224 104 7 837 234 0 0 0 chr13 33071516 33071542 -87212770 + (TC)n Simple_repeat Simple_repeat 2 27 0 7 837 292 352 35 14 chr13 33071889 33072033 -87212279 + ORR1E LTR MaLR 4 150 -209 7 837 342 0 0 0 chr13 33072055 33072093 -87212219 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 837 654 315 165 19 chr13 33072613 33073153 -87211159 + MER67B LTR ERV1 43 661 0 7 837 333 230 0 0 chr13 33073311 33073385 -87210927 + RLTR33 LTR ERVK 175 248 -430 7 837 590 263 35 120 chr13 33073393 33073652 -87210660 + RLTR33 LTR ERVK 357 593 -85 7 837 607 299 90 17 chr13 33074003 33074302 -87210010 + L1MC1 LINE L1 5783 6103 -230 7 837 990 264 137 10 chr13 33074333 33074647 -87209665 - MTE2b LTR MaLR -4 375 22 8 837 240 276 152 62 chr13 33074973 33075216 -87209096 + RLTR11B LTR ERVK 78 342 -111 8 837 1514 48 21 5 chr13 33076433 33076620 -87207692 - B2_Mm1t SINE B2 -2 191 2 8 837 545 105 0 10 chr13 33076678 33076774 -87207538 + (GA)n Simple_repeat Simple_repeat 2 96 0 8 837 555 56 0 0 chr13 33077784 33077855 -87206457 + (TTCC)n Simple_repeat Simple_repeat 1 71 0 8 837 3157 229 45 45 chr13 33077856 33079008 -87205304 + MYSERV6-int LTR ERVK 7813 8782 -177 8 837 3116 85 0 0 chr13 33079062 33079462 -87204850 + MTB LTR MaLR 1 400 0 8 837 708 213 24 66 chr13 33079582 33079793 -87204519 + MYSERV-int LTR ERVK 6349 6550 0 8 837 1038 274 80 57 chr13 33079793 33080287 -87204025 + RLTR11A2 LTR ERVK 1 496 -32 8 837 214 306 0 0 chr13 33080544 33080616 -87203696 + (TG)n Simple_repeat Simple_repeat 1 72 0 8 837 241 225 11 11 chr13 33080823 33080913 -87203399 + (CATATA)n Simple_repeat Simple_repeat 4 93 0 8 837 1044 0 0 0 chr13 33081122 33081238 -87203074 + (TTTCC)n Simple_repeat Simple_repeat 4 119 0 9 837 441 0 0 0 chr13 33081266 33081315 -87202997 + (TC)n Simple_repeat Simple_repeat 2 50 0 9 837 238 279 35 0 chr13 33081656 33081742 -87202570 + Lx7 LINE L1 5665 5753 -1943 9 837 480 271 44 22 chr13 33081786 33081922 -87202390 - ORR1D1-int LTR MaLR -265 1105 967 9 837 2540 261 67 13 chr13 33081892 33082680 -87201632 - ORR1D1-int LTR MaLR -538 832 2 9 837 1140 248 14 89 chr13 33082723 33083082 -87201230 - ORR1D1 LTR MaLR -40 334 3 9 837 244 241 233 33 chr13 33083390 33083510 -87200802 + L1M4 LINE L1 5480 5623 -555 9 837 2154 179 32 0 chr13 33083514 33083916 -87200396 + MTC LTR MaLR 2 416 -5 9 837 364 301 41 7 chr13 33083923 33084070 -87200242 + L1M4 LINE L1 5623 5774 -410 9 837 216 0 0 0 chr13 33084082 33084106 -87200206 + (A)n Simple_repeat Simple_repeat 1 24 0 9 837 1395 111 75 58 chr13 33084666 33084944 -87199368 + Lx LINE L1 6368 6650 -4 9 837 327 25 0 0 chr13 33084991 33085031 -87199281 + (GAAAA)n Simple_repeat Simple_repeat 3 42 0 9 837 198 0 0 0 chr13 33085055 33085077 -87199235 + (GA)n Simple_repeat Simple_repeat 1 22 0 9 837 432 0 0 0 chr13 33085077 33085125 -87199187 + (GGAA)n Simple_repeat Simple_repeat 2 49 0 1 837 432 240 82 57 chr13 33085172 33085331 -87198981 + MTD LTR MaLR 248 410 -9 1 837 4621 132 72 21 chr13 33085555 33085698 -87198614 - RMER17B LTR ERVK 0 958 819 1 837 4026 121 127 14 chr13 33085698 33086425 -87197887 + RMER17D2 LTR ERVK 1 809 0 1 837 4621 132 72 21 chr13 33086425 33087192 -87197120 - RMER17B LTR ERVK -140 818 1 1 837 268 327 38 19 chr13 33087649 33087755 -87196557 - PB1 SINE Alu -19 108 1 1 837 571 268 130 14 chr13 33088257 33088465 -87195847 + B4A SINE B4 6 237 -55 1 837 235 186 68 0 chr13 33089396 33089455 -87194857 - L1M5 LINE L1 -488 5685 5623 1 837 381 266 28 0 chr13 33089587 33089696 -87194616 + MLT1B LTR MaLR 5 116 -274 1 837 1761 109 0 35 chr13 33089799 33090083 -87194229 - RLTR12A LTR ERVK -291 277 4 1 837 34 24 0 0 chr13 33090573 33090614 -87193698 + AT_rich Low_complexity Low_complexity 1 41 0 1 837 426 331 14 0 chr13 33091911 33092050 -87192262 - B1_Mur2 SINE Alu 0 149 9 1 837 2068 164 119 27 chr13 33092051 33092565 -87191747 + RLTR31_Mm LTR ERVK 1 561 0 1 837 1099 86 121 0 chr13 33093459 33093633 -87190679 + B2_Mm2 SINE B2 1 195 0 1 837 183 100 0 0 chr13 33093661 33093691 -87190621 + (ATG)n Simple_repeat Simple_repeat 1 30 0 1 837 634 278 104 42 chr13 33093698 33094100 -87190212 + L1MB7 LINE L1 5318 5744 -440 1 837 216 0 0 0 chr13 33096004 33096028 -87188284 + (T)n Simple_repeat Simple_repeat 1 24 0 1 837 234 254 64 102 chr13 33096095 33096254 -87188058 + L1MB7 LINE L1 5855 6005 -173 1 837 245 297 103 3 chr13 33098815 33098928 -87185384 + PB1 SINE Alu 10 126 -21 1 837 192 163 0 0 chr13 33099287 33099330 -87184982 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 837 360 0 0 0 chr13 33099582 33099622 -87184690 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 837 229 308 159 0 chr13 33099697 33099804 -87184508 - B4 SINE B4 -163 129 6 1 837 243 318 91 0 chr13 33100123 33100211 -87184101 + PB1D7 SINE Alu 7 102 -18 1 837 1208 69 17 0 chr13 33100339 33100513 -87183799 - B2_Mm2 SINE B2 -2 193 17 1 837 411 316 146 51 chr13 33101781 33102151 -87182161 - MT2A LTR ERVL 0 533 129 1 837 37 52 0 0 chr13 33103234 33103292 -87181020 + AT_rich Low_complexity Low_complexity 1 58 0 1 837 3625 110 0 6 chr13 33103994 33104505 -87179807 - Lx LINE L1 0 6654 6147 1 837 289 320 61 81 chr13 33104644 33105004 -87179308 - MTEa LTR MaLR 0 379 19 1 837 1193 224 122 29 chr13 33105093 33105117 -87179195 + MTD LTR MaLR 1 22 -397 1 837 375 60 0 0 chr13 33105117 33105167 -87179145 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 837 1193 224 122 29 chr13 33105167 33105519 -87178793 + MTD LTR MaLR 23 412 -7 1 837 317 234 41 33 chr13 33106525 33106653 -87177659 - MTEa LTR MaLR -8 371 231 1 837 424 288 50 60 chr13 33108009 33108227 -87176085 + B3 SINE B2 1 216 0 1 837 424 259 28 2 chr13 33108369 33108501 -87175811 - L1MB5 LINE L1 -125 6053 5920 1 837 470 361 7 13 chr13 33108492 33108795 -87175517 - L1M4 LINE L1 -932 5214 4914 1 837 633 226 0 0 chr13 33108980 33109104 -87175208 + RSINE1 SINE B4 11 134 -31 1 837 1820 197 105 3 chr13 33109495 33109877 -87174435 + MTC LTR MaLR 1 421 0 1 837 239 304 14 0 chr13 33110010 33110079 -87174233 - MTD LTR MaLR -213 206 137 1 837 351 0 0 0 chr13 33110244 33110283 -87174029 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 837 432 0 0 0 chr13 33110968 33111016 -87173296 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 837 225 0 0 0 chr13 33111016 33111040 -87173272 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 837 3368 168 183 60 chr13 33111374 33112250 -87172062 - RLTR13C1 LTR ERVK 0 983 1 1 837 266 250 12 48 chr13 33112560 33112644 -87171668 - MLT1A0 LTR MaLR -26 339 259 1 837 822 229 0 2 chr13 33112627 33112846 -87171466 + ORR1A3-int LTR MaLR 384 605 -1187 1 837 544 175 0 10 chr13 33112800 33112898 -87171414 + MT2B LTR ERVL 157 253 -348 1 837 253 287 117 0 chr13 33112815 33112909 -87171403 + B1F SINE Alu 8 112 -37 1 837 370 221 0 0 chr13 33112955 33113023 -87171289 + B1_Mur4 SINE Alu 24 91 -59 1 837 315 0 0 0 chr13 33113036 33113071 -87171241 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 837 387 127 0 0 chr13 33113071 33113133 -87171179 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 837 1108 207 25 13 chr13 33113145 33113573 -87170739 - RLTR12A LTR ERVK -4 564 98 1 837 2520 44 224 0 chr13 33113573 33113785 -87170527 + MT2C_Mm LTR ERVL 1 212 -263 1 837 663 84 0 0 chr13 33113785 33113880 -87170432 + (TC)n Simple_repeat Simple_repeat 1 95 0 1 837 2520 44 224 0 chr13 33113880 33114055 -87170257 + MT2C_Mm LTR ERVL 213 474 -1 1 837 285 258 31 10 chr13 33114248 33114346 -87169966 - B1_Mur2 SINE Alu -1 148 49 1 837 456 340 65 8 chr13 33114606 33114852 -87169460 - RLTR26 LTR ERVK -306 336 77 1 837 258 81 0 0 chr13 33115890 33115927 -87168385 + (GGA)n Simple_repeat Simple_repeat 2 38 0 1 837 223 250 0 0 chr13 33115932 33115976 -87168336 + (ATG)n Simple_repeat Simple_repeat 3 46 0 1 837 635 277 122 40 chr13 33115986 33116381 -87167931 + L1M4 LINE L1 5318 5744 -440 1 837 226 235 9 97 chr13 33116393 33116506 -87167806 - RNLTR23 LTR ERVK 0 642 540 1 837 925 135 0 26 chr13 33118940 33119092 -87165220 + B1_Mus1 SINE Alu 1 148 0 1 837 198 0 0 0 chr13 33119099 33119121 -87165191 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 837 3257 204 65 32 chr13 33121753 33122004 -87162308 + MYSERV16_I-int LTR ERVK 1362 1634 -692 1 837 2198 136 69 11 chr13 33122004 33122169 -87162143 - RLTR9D LTR ERVK 0 403 237 1 837 225 0 0 0 chr13 33122169 33122194 -87162118 + (C)n Simple_repeat Simple_repeat 1 25 0 1 837 2198 136 69 11 chr13 33122194 33122407 -87161905 - RLTR9D LTR ERVK -167 236 4 1 837 3257 204 65 32 chr13 33122407 33123022 -87161290 + MYSERV16_I-int LTR ERVK 1635 2256 -70 1 837 187 167 0 48 chr13 33123044 33123107 -87161205 + T-rich Low_complexity Low_complexity 1 60 0 1 837 328 377 26 52 chr13 33123170 33123475 -87160837 + RLTR17 LTR ERVK 126 422 -270 1 837 211 320 40 12 chr13 33123773 33123875 -87160437 + B1F1 SINE Alu 10 114 -3 1 837 255 103 0 0 chr13 33124499 33124538 -87159774 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 837 376 241 35 0 chr13 33125040 33125127 -87159185 + B1F1 SINE Alu 14 103 -46 1 837 472 349 96 51 chr13 33126567 33127077 -87157235 - MT2A LTR ERVL 0 533 1 1 837 26 30 0 0 chr13 33127877 33127910 -87156402 + AT_rich Low_complexity Low_complexity 1 33 0 1 837 273 57 0 0 chr13 33129237 33129272 -87155040 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 837 958 265 132 3 chr13 33129278 33129604 -87154708 + MTD LTR MaLR 22 389 -30 1 837 315 227 45 11 chr13 33130608 33130697 -87153615 - MTEb LTR MaLR -1 378 287 1 837 261 269 39 0 chr13 33132114 33132192 -87152120 + B3A SINE B2 34 114 -84 1 837 183 42 0 0 chr13 33132209 33132233 -87152079 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1 837 320 250 52 52 chr13 33132471 33132517 -87151795 - L1MB5 LINE L1 -120 6054 6011 1 837 4606 206 9 21 chr13 33132517 33133436 -87150876 + RMER13B LTR ERVK 1 908 0 1 837 320 250 52 52 chr13 33133436 33133524 -87150788 - L1MB5 LINE L1 -164 6010 5920 1 837 284 321 0 18 chr13 33133664 33133775 -87150537 - L1MB5 LINE L1 -1093 5053 4945 1 837 1550 263 70 96 chr13 33133892 33134883 -87149429 - RMER17B LTR ERVK -4 904 2 1 837 590 291 7 7 chr13 33134981 33135130 -87149182 + RSINE1 SINE B4 11 159 -6 1 837 3581 193 98 18 chr13 33135332 33136127 -87148185 - RMER13A LTR ERVK -1 859 1 1 837 1814 182 89 10 chr13 33136308 33136691 -87147621 + MTC LTR MaLR 9 421 0 1 837 284 315 14 99 chr13 33137271 33137412 -87146900 - MTD LTR MaLR -280 139 11 1 837 1426 288 92 64 chr13 33138145 33139270 -87145042 + L1_Mur3 LINE L1 2635 3791 -2089 1 837 1279 245 112 0 chr13 33139274 33139649 -87144663 + MTD LTR MaLR 1 417 -2 1 837 373 261 78 68 chr13 33139649 33139954 -87144358 + L1_Mur3 LINE L1 3788 4106 -1741 1 837 1056 72 14 7 chr13 33139954 33140094 -87144218 + B1_Mus1 SINE Alu 1 141 -7 1 837 265 24 48 0 chr13 33140096 33140138 -87144174 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 837 342 300 90 58 chr13 33140138 33140191 -87144121 + L1_Mur3 LINE L1 4107 4155 -1692 1 837 4978 118 78 7 chr13 33140205 33141069 -87143243 - RMER17B LTR ERVK 0 958 34 1 837 2096 140 83 56 chr13 33141102 33141510 -87142802 - RMER17A-int LTR ERVK -52 1676 1258 1 837 428 187 69 61 chr13 33141510 33141641 -87142671 + RLTR31_Mm LTR ERVK 414 545 -16 1 837 203 136 0 43 chr13 33142631 33142659 -87141653 + (CAA)n Simple_repeat Simple_repeat 2 29 0 1 837 240 35 0 0 chr13 33142659 33142688 -87141624 + (CCA)n Simple_repeat Simple_repeat 3 31 0 1 837 203 136 0 43 chr13 33142688 33142705 -87141607 + (CAA)n Simple_repeat Simple_repeat 3 18 0 1 837 279 0 0 0 chr13 33143389 33143420 -87140892 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 837 1098 115 0 0 chr13 33143452 33143626 -87140686 + (GA)n Simple_repeat Simple_repeat 1 174 0 1 837 883 153 18 24 chr13 33144263 33144430 -87139882 - Lx3A LINE L1 -9 6972 6807 1 837 2583 163 57 67 chr13 33144430 33145341 -87138971 + RLTR13D1 LTR ERVK 1 855 0 1 837 3100 113 5 0 chr13 33145341 33145775 -87138537 - Lx3A LINE L1 -169 6812 6377 1 837 622 280 102 71 chr13 33145981 33146278 -87138034 - L1MA9 LINE L1 -403 5909 5609 1 837 1558 273 117 27 chr13 33146278 33146798 -87137514 + RMER2 LTR ERV1 1 567 0 1 837 622 280 102 71 chr13 33146798 33146911 -87137401 - L1MA9 LINE L1 -704 5608 5486 1 837 1903 118 28 19 chr13 33146921 33147240 -87137072 + RLTRETN_Mm LTR ERVK 1 322 0 1 837 11538 11 1 0 chr13 33147240 33148502 -87135810 + ETnERV2-int LTR ERVK 1 1263 -2051 1 837 1296 7 0 0 chr13 33148502 33148652 -87135660 + L1Md_A LINE L1 6433 6582 0 1 837 216 130 0 0 chr13 33148691 33148737 -87135575 + (A)n Simple_repeat Simple_repeat 1 46 0 1 837 3694 29 0 14 chr13 33148737 33149164 -87135148 + ETnERV2-int LTR ERVK 1247 1667 -1647 1 837 18764 160 36 25 chr13 33149384 33154308 -87130004 + ETnERV2-int LTR ERVK 1790 7203 -203 1 837 1925 102 31 22 chr13 33154308 33154627 -87129685 + RLTRETN_Mm LTR ERVK 1 322 0 1 837 593 283 76 28 chr13 33156252 33156530 -87127782 + ORR1E LTR MaLR 1 287 -83 1 837 303 298 0 0 chr13 33156530 33156614 -87127698 + URR1B DNA MER1_type 1 84 -141 1 837 216 0 0 0 chr13 33156908 33156932 -87127380 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 837 288 309 55 50 chr13 33157694 33157912 -87126400 + Charlie6 DNA MER1_type 1285 1503 -1997 2 837 364 250 25 0 chr13 33158725 33158805 -87125507 + B4A SINE B4 195 276 -16 2 837 1121 22 7 0 chr13 33158811 33158947 -87125365 + (TC)n Simple_repeat Simple_repeat 1 137 0 2 837 951 335 72 19 chr13 33159366 33159795 -87124517 + MTE-int LTR MaLR 1070 1521 -59 2 837 272 192 26 52 chr13 33160079 33160156 -87124156 + MTEa LTR MaLR 281 355 -24 2 837 576 200 8 0 chr13 33160298 33160418 -87123894 - Lx7 LINE L1 -610 7086 6966 2 837 4563 178 60 7 chr13 33160419 33161102 -87123210 - L1_Mur3 LINE L1 -532 5348 4625 2 837 201 121 0 0 chr13 33161102 33161135 -87123177 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 104 4563 238 76 8 chr13 33161135 33161938 -87122374 - L1_Mur3 LINE L1 -1245 4641 3759 2 838 3049 60 42 0 chr13 33162112 33162496 -87121816 - MTB LTR MaLR 0 400 1 2 838 239 221 0 93 chr13 33162756 33162831 -87121481 + L1M2 LINE L1 5443 5510 -790 2 838 306 118 39 19 chr13 33163209 33163261 -87121051 + L1MA5 LINE L1 6201 6253 -47 2 838 236 260 95 142 chr13 33163742 33163953 -87120359 + L1MC3 LINE L1 7194 7394 -391 2 838 254 231 89 13 chr13 33164734 33164813 -87119499 - MLT1A1 LTR MaLR -279 129 45 2 838 353 239 0 27 chr13 33165503 33165576 -87118736 - MER57-int LTR ERV1 -303 7234 7164 2 838 1034 228 0 136 chr13 33166435 33166765 -87117547 + RLTR21 LTR ERVK 1288 1572 0 2 838 577 229 0 8 chr13 33166765 33166888 -87117424 + RSINE1 SINE B4 5 126 -39 2 838 2612 165 60 2 chr13 33167093 33167579 -87116733 - RLTR28 LTR ERVL -10 514 1 2 838 249 175 159 0 chr13 33167786 33167849 -87116463 + B1_Mur3 SINE Alu 68 140 -9 2 838 252 329 0 0 chr13 33168133 33168212 -87116100 + Tigger7 DNA MER2_type 18 96 -2395 2 838 1430 222 25 68 chr13 33168214 33168581 -87115731 + Lx7 LINE L1 7062 7412 -284 2 838 562 98 0 26 chr13 33168594 33168709 -87115603 + (TCTCTG)n Simple_repeat Simple_repeat 3 114 0 2 838 234 0 0 0 chr13 33168753 33168779 -87115533 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 838 366 23 0 0 chr13 33168779 33168821 -87115491 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 838 839 179 99 56 chr13 33168900 33169119 -87115193 + MTD LTR MaLR 175 419 0 2 838 316 262 112 24 chr13 33169119 33169244 -87115068 + MLT1A1 LTR MaLR 156 291 -117 2 838 689 330 136 9 chr13 33169376 33169795 -87114517 + MLT-int LTR MaLR 50 521 -1214 2 838 261 288 36 43 chr13 33169765 33169800 -87114512 + RMER17A2 LTR ERVK 249 280 -626 2 838 259 306 92 53 chr13 33169800 33169931 -87114381 + B1F1 SINE Alu 1 136 -13 2 838 261 288 36 43 chr13 33169931 33170033 -87114279 + RMER17A2 LTR ERVK 281 385 -521 2 838 583 347 206 34 chr13 33170163 33170655 -87113657 + MLT-int LTR MaLR 560 1188 -547 2 838 261 0 0 0 chr13 33170655 33170684 -87113628 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 838 583 347 206 34 chr13 33170684 33171019 -87113293 + MLT-int LTR MaLR 1189 1530 -205 2 838 21 0 0 0 chr13 33171125 33171146 -87113166 + AT_rich Low_complexity Low_complexity 1 21 0 2 838 249 395 43 9 chr13 33171327 33171442 -87112870 + MLT-int LTR MaLR 1058 1176 -559 2 838 642 294 6 47 chr13 33171939 33172110 -87112202 - RSINE1 SINE B4 0 165 2 2 838 453 228 40 8 chr13 33172130 33172254 -87112058 + MLT1A1 LTR MaLR 278 405 -3 2 838 696 275 25 20 chr13 33172254 33172451 -87111861 + MER70-int LTR ERVL 2179 2376 -2647 2 838 468 262 70 92 chr13 33172501 33172728 -87111584 - RMER12 LTR ERVK 0 1322 1101 2 838 7700 109 165 1 chr13 33172937 33174248 -87110064 - RLTR22_Mur LTR ERVK -323 1525 1 2 838 1495 258 97 29 chr13 33174299 33174857 -87109455 + MER70-int LTR ERVL 2510 3105 -1918 2 838 487 332 47 4 chr13 33174872 33175150 -87109162 + MER70-int LTR ERVL 3139 3428 -1595 2 838 381 310 82 66 chr13 33175213 33175517 -87108795 - RMER10A LTR ERVL -133 309 1 2 838 453 81 0 0 chr13 33175531 33175593 -87108719 + (TCC)n Simple_repeat Simple_repeat 2 63 0 2 838 288 0 0 0 chr13 33175593 33175625 -87108687 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 838 464 309 83 24 chr13 33177692 33177791 -87106521 + RMER17C LTR ERVK 1 102 -308 2 838 959 9 17 0 chr13 33177791 33177906 -87106406 + (TCTCCC)n Simple_repeat Simple_repeat 1 117 0 2 838 464 309 83 24 chr13 33177906 33178095 -87106217 + RMER17C LTR ERVK 103 305 -105 2 838 324 0 0 0 chr13 33179502 33179538 -87104774 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2 838 699 281 77 22 chr13 33179619 33179841 -87104471 + B4A SINE B4 3 236 -56 2 838 708 164 0 0 chr13 33179936 33180113 -87104199 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 838 892 152 1 15 chr13 33180137 33180812 -87103500 + (CA)n Simple_repeat Simple_repeat 1 665 0 2 838 869 104 3 59 chr13 33180824 33181196 -87103116 + (CA)n Simple_repeat Simple_repeat 1 351 0 2 838 272 177 191 60 chr13 33181910 33181994 -87102318 + PB1D10 SINE Alu 22 116 -1 2 838 726 117 0 0 chr13 33182892 33183003 -87101309 + (TA)n Simple_repeat Simple_repeat 2 112 0 2 838 183 80 0 0 chr13 33183888 33183913 -87100399 + (CAT)n Simple_repeat Simple_repeat 3 27 0 2 838 340 296 104 0 chr13 33184441 33184556 -87099756 - MIR SINE MIR 0 262 136 2 838 237 180 0 0 chr13 33184566 33184616 -87099696 + (CTACT)n Simple_repeat Simple_repeat 2 51 0 2 838 289 222 37 0 chr13 33185032 33185167 -87099145 + (TGGA)n Simple_repeat Simple_repeat 3 142 0 2 838 277 346 87 12 chr13 33186581 33186742 -87097570 + LTR89 LTR ERVL? 680 852 -27 2 838 22 0 0 0 chr13 33187983 33188005 -87096307 + AT_rich Low_complexity Low_complexity 1 22 0 2 838 452 174 257 0 chr13 33188449 33188558 -87095754 + B1_Mur4 SINE Alu 3 139 -11 2 838 723 282 12 57 chr13 33188649 33188897 -87095415 + B4A SINE B4 5 241 -51 2 838 1320 48 0 0 chr13 33189395 33189542 -87094770 - B1_Mm SINE Alu 0 147 1 2 838 284 61 286 0 chr13 33189674 33189723 -87094589 - RMER21B LTR ERV1 -94 748 686 2 838 546 268 46 23 chr13 33189724 33189854 -87094458 + ETnERV2-int LTR ERVK 7070 7202 -204 2 838 2875 188 145 19 chr13 33190239 33190853 -87093459 - RMER21B LTR ERV1 -151 691 1 2 838 331 154 57 34 chr13 33190961 33191136 -87093176 + (TGAG)n Simple_repeat Simple_repeat 2 180 0 2 838 247 390 10 0 chr13 33192239 33192339 -87091973 - ID_B1 SINE B4 -49 175 75 2 838 684 303 70 44 chr13 33192528 33192801 -87091511 - B4 SINE B4 -12 280 1 2 838 1487 225 88 3 chr13 33193370 33193700 -87090612 + MTD LTR MaLR 48 405 -14 2 838 1314 189 12 20 chr13 33193703 33194033 -87090279 + RMER21B LTR ERV1 576 837 -5 2 838 1592 240 55 99 chr13 33194231 33194726 -87089586 + RLTR18B LTR ERVK 40 512 0 2 838 404 112 0 59 chr13 33194918 33195003 -87089309 - Lx2A LINE L1 -5 7003 6924 2 838 7249 129 10 20 chr13 33195005 33195644 -87088668 - Lx2A LINE L1 -32 6976 6347 2 838 1043 99 0 0 chr13 33195644 33195775 -87088537 + B1_Mus1 SINE Alu 2 132 -16 2 838 297 0 0 0 chr13 33195776 33195809 -87088503 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2 838 7249 129 10 20 chr13 33195809 33196298 -87088014 - Lx2A LINE L1 -662 6346 5858 2 838 334 344 10 0 chr13 33197203 33197299 -87087013 - PB1D10 SINE Alu -20 97 1 2 838 3569 43 0 10 chr13 33197981 33198381 -87085931 + MTA_Mm LTR MaLR 1 396 0 2 838 273 227 90 15 chr13 33198384 33198451 -87085861 - B1F2 SINE Alu -66 83 12 2 838 6724 64 5 8 chr13 33198636 33199501 -87084811 - L1Md_F2 LINE L1 -12 6570 5709 2 838 4614 88 2 0 chr13 33199498 33200112 -87084200 + L1_Mm LINE L1 4883 5497 -386 2 838 4247 210 56 24 chr13 33201200 33202128 -87082184 - RMER17B LTR ERVK 0 958 1 2 838 548 29 14 0 chr13 33203629 33203699 -87080613 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 838 422 278 18 9 chr13 33203747 33203856 -87080456 - B3 SINE B2 -5 211 102 2 838 423 0 0 0 chr13 33204389 33204436 -87079876 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 838 180 0 0 0 chr13 33206058 33206078 -87078234 + (T)n Simple_repeat Simple_repeat 1 20 0 2 838 7231 156 22 6 chr13 33206133 33207389 -87076923 - L1_Mur2 LINE L1 -323 5554 4279 2 838 7250 149 36 10 chr13 33207391 33208278 -87076034 - Lx2 LINE L1 0 6997 6102 2 838 3403 63 2 0 chr13 33208278 33208677 -87075635 + MTB LTR MaLR 1 400 0 2 838 7250 149 36 10 chr13 33208677 33208989 -87075323 - Lx2 LINE L1 -896 6101 5767 2 838 1894 86 0 45 chr13 33208986 33209254 -87075058 + L1Md_F2 LINE L1 6327 6582 0 2 838 14086 174 85 51 chr13 33209255 33215010 -87069302 - Lx2 LINE L1 -104 5782 567 2 838 1037 145 57 24 chr13 33215006 33215218 -87069094 - L1_Mur2 LINE L1 -1582 4295 4077 2 838 390 223 42 11 chr13 33215233 33215328 -87068984 - Lx6 LINE L1 -567 6893 6796 2 838 24 67 0 0 chr13 33215454 33215499 -87068813 + AT_rich Low_complexity Low_complexity 1 45 0 2 838 242 358 39 55 chr13 33215657 33215784 -87068528 + MER87 LTR ERV1 2 126 -415 2 838 556 299 21 16 chr13 33216057 33216247 -87068065 - L1M4 LINE L1 -447 5737 5547 2 838 7908 121 56 5 chr13 33216357 33218754 -87065558 - L1VL2 LINE L1 -2593 3293 475 2 838 23334 112 17 11 chr13 33219188 33225154 -87059158 - L1_Mus1 LINE L1 0 6567 585 2 838 2905 111 33 9 chr13 33227878 33228304 -87056008 - Lx3_Mus LINE L1 -4 7005 6570 2 838 275 297 59 0 chr13 33228324 33228425 -87055887 - B3 SINE B2 -8 208 102 2 838 283 371 51 5 chr13 33228532 33228746 -87055566 - L1MB7 LINE L1 -47 6137 5914 2 838 258 156 0 0 chr13 33228753 33228798 -87055514 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 838 212 154 0 0 chr13 33229224 33229263 -87055049 + T-rich Low_complexity Low_complexity 2 40 0 2 838 756 169 98 53 chr13 33230163 33230277 -87054035 + L1_Mur2 LINE L1 2613 2734 -3143 2 838 366 23 0 0 chr13 33230277 33230320 -87053992 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 2 838 756 169 98 53 chr13 33230320 33230430 -87053882 + L1_Mur2 LINE L1 2735 2846 -3031 2 838 3103 202 20 55 chr13 33230425 33231295 -87053017 + L1_Mur2 LINE L1 474 1382 -4495 2 838 4418 215 45 35 chr13 33231908 33233258 -87051054 - MMVL30-int LTR ERV1 -2386 5392 2879 2 838 4086 163 58 54 chr13 33233253 33234245 -87050067 - MMVL30-int LTR ERV1 -1468 2230 1501 2 838 539 216 89 0 chr13 33234818 33234957 -87049355 - L1MD LINE L1 -747 5399 5240 2 838 467 226 113 0 chr13 33234975 33235090 -87049222 + ID_B1 SINE B4 93 220 -4 2 838 228 287 11 11 chr13 33236372 33236467 -87047845 + T-rich Low_complexity Low_complexity 3 97 0 2 838 299 130 0 172 chr13 33236838 33236931 -87047381 - MMVL30-int LTR ERV1 -2871 827 751 3 838 297 0 0 0 chr13 33237228 33237261 -87047051 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 3 838 1563 173 21 29 chr13 33237814 33238038 -87046274 + L1_Mur2 LINE L1 1379 1609 -4268 3 838 5460 119 48 19 chr13 33238038 33238900 -87045412 + RMER17D LTR ERVK 1 887 -2 3 838 1563 173 21 29 chr13 33238900 33239015 -87045297 + L1_Mur2 LINE L1 1610 1715 -4162 3 838 13143 108 22 1 chr13 33239001 33241061 -87043251 + L1_Mus2 LINE L1 3875 5986 -580 3 838 619 125 1 14 chr13 33241055 33241164 -87043148 + L1_Mm LINE L1 5371 5499 -663 3 838 184 197 62 47 chr13 33243334 33243398 -87040914 - MIRb SINE MIR -15 253 189 3 838 1419 204 146 37 chr13 33244014 33244390 -87039922 - MTD LTR MaLR 0 419 3 3 838 364 239 70 19 chr13 33244608 33244802 -87039510 + ORR1E LTR MaLR 164 405 -14 3 838 1297 41 0 0 chr13 33245806 33245953 -87038359 + B1_Mus2 SINE Alu 1 147 0 3 838 279 0 0 0 chr13 33245953 33245984 -87038328 + (A)n Simple_repeat Simple_repeat 1 31 0 3 838 383 299 87 92 chr13 33246712 33247193 -87037119 + MT2A LTR ERVL 1 554 0 3 838 306 287 84 11 chr13 33248531 33248626 -87035686 - PB1D7 SINE Alu -18 102 1 3 838 180 279 0 0 chr13 33251000 33251043 -87033269 + L2c LINE L2 3266 3308 -79 3 838 271 338 25 0 chr13 33252191 33252271 -87032041 - B3 SINE B2 -25 191 110 3 838 11193 41 2 2 chr13 33253049 33255106 -87029206 - L1Md_F3 LINE L1 0 6584 4528 3 838 807 169 62 0 chr13 33255113 33255273 -87029039 + L1Md_A LINE L1 382 551 -6173 3 838 22 0 0 0 chr13 33256208 33256230 -87028082 + AT_rich Low_complexity Low_complexity 1 22 0 3 838 199 0 31 31 chr13 33256269 33256301 -87028011 + (CAT)n Simple_repeat Simple_repeat 2 33 0 3 838 6343 109 11 0 chr13 33256990 33257915 -87026397 - L1_Mm LINE L1 -1111 4772 3838 3 838 5780 89 6 1 chr13 33257917 33258646 -87025666 + L1_Mus3 LINE L1 5907 6638 0 3 838 337 352 28 22 chr13 33258733 33258873 -87025439 - PB1D7 SINE Alu 0 149 17 3 838 50 18 0 0 chr13 33259459 33259516 -87024796 + AT_rich Low_complexity Low_complexity 1 57 0 3 838 423 0 0 0 chr13 33259863 33259910 -87024402 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 838 532 257 0 56 chr13 33260040 33260184 -87024128 - B1_Mur1 SINE Alu -3 146 11 3 838 254 225 14 27 chr13 33260682 33260755 -87023557 + GA-rich Low_complexity Low_complexity 2 73 0 3 838 4941 47 40 7 chr13 33260814 33261410 -87022902 + L1Md_F2 LINE L1 5955 6570 -12 3 838 701 286 35 31 chr13 33261526 33261844 -87022468 - RLTR15 LTR ERVK -39 320 2 3 838 1520 199 101 66 chr13 33262383 33262748 -87021564 - ORR1C1 LTR MaLR 0 378 1 3 838 472 314 63 11 chr13 33262759 33262933 -87021379 + MTE2a LTR MaLR 1 183 -196 3 838 622 270 60 78 chr13 33262958 33263068 -87021244 + MTE2a LTR MaLR 167 264 -115 3 838 1683 201 52 22 chr13 33263068 33263430 -87020882 - ORR1D1 LTR MaLR 0 374 2 3 838 622 270 60 78 chr13 33263430 33263536 -87020776 + MTE2a LTR MaLR 265 379 0 3 838 12766 88 22 5 chr13 33263609 33265934 -87018378 + L1Md_F LINE L1 552 2919 -2964 3 838 2450 103 3 12 chr13 33265934 33266278 -87018034 + L1Md_F2 LINE L1 6238 6578 -4 3 838 728 287 9 67 chr13 33266603 33266749 -87017563 + B3 SINE B2 1 141 -75 3 838 4919 94 13 58 chr13 33266749 33267536 -87016776 + RMER17A LTR ERVK 1 751 0 3 838 728 287 9 67 chr13 33267536 33267613 -87016699 + B3 SINE B2 142 211 -5 3 838 604 319 72 42 chr13 33268476 33268741 -87015571 + RLTR12B LTR ERVK 48 320 -208 3 838 4683 161 50 34 chr13 33268830 33269048 -87015264 - RMER17A2 LTR ERVK 0 906 698 3 838 3254 34 0 8 chr13 33269048 33269405 -87014907 - IAPEY2_LTR LTR ERVK -3 354 1 3 838 4683 161 50 34 chr13 33269405 33270077 -87014235 - RMER17A2 LTR ERVK -209 697 1 3 838 252 216 88 33 chr13 33270114 33270205 -87014107 + RLTR11A LTR ERVK 383 478 -50 3 838 1808 45 27 0 chr13 33270214 33270435 -87013877 + L1Md_F2 LINE L1 6356 6582 0 3 838 633 96 0 0 chr13 33270803 33270897 -87013415 + (CA)n Simple_repeat Simple_repeat 1 94 0 3 838 809 267 218 3 chr13 33272406 33272699 -87011613 + MTE2a LTR MaLR 4 359 -20 3 838 496 295 44 15 chr13 33272721 33272924 -87011388 - L1MC1 LINE L1 -233 6100 5892 3 838 678 99 10 0 chr13 33273041 33273134 -87011178 + MTB LTR MaLR 1 94 -306 3 838 1400 196 109 17 chr13 33273134 33273481 -87010831 - RMER17B LTR ERVK 0 958 580 3 838 527 266 35 17 chr13 33273531 33273703 -87010609 - L1MC1 LINE L1 -236 6097 5923 3 838 270 0 0 0 chr13 33273706 33273736 -87010576 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 3 838 2692 132 4 67 chr13 33273736 33274270 -87010042 - RMER17A2 LTR ERVK -406 500 1 3 838 1821 119 68 0 chr13 33274270 33274563 -87009749 + MTB LTR MaLR 88 400 0 3 838 21 0 0 0 chr13 33274717 33274738 -87009574 + AT_rich Low_complexity Low_complexity 1 21 0 3 838 659 278 282 63 chr13 33274861 33275240 -87009072 - RLTR33 LTR ERVK -36 642 181 3 838 6616 94 12 9 chr13 33275346 33276224 -87008088 + L1_Mus4 LINE L1 5750 6630 -6 3 838 980 135 0 17 chr13 33276248 33276429 -87007883 + GA-rich Low_complexity Low_complexity 1 178 0 3 838 296 304 122 37 chr13 33276498 33276662 -87007650 - MER67A LTR ERV1 0 543 366 3 838 687 303 92 3 chr13 33276830 33277125 -87007187 + MLT1B LTR MaLR 70 390 0 3 838 486 276 32 0 chr13 33279488 33279611 -87004701 - B1_Mur2 SINE Alu -9 140 14 3 838 2188 182 10 0 chr13 33279980 33280392 -87003920 - Lx2 LINE L1 -284 6713 6298 3 838 3874 135 41 9 chr13 33280395 33281139 -87003173 + Lx2 LINE L1 5515 6281 -716 3 838 461 278 91 45 chr13 33281395 33281704 -87002608 + L1M4 LINE L1 5310 5632 -552 3 838 444 240 25 53 chr13 33282247 33282398 -87001914 - RLTR43A LTR ERVK 0 364 224 3 838 317 253 0 13 chr13 33284176 33284252 -87000060 + B3 SINE B2 131 205 -11 3 838 393 309 137 29 chr13 33286851 33287075 -86997237 + RLTR19 LTR ERVK 313 715 0 3 838 237 371 37 19 chr13 33287967 33288074 -86996238 + B1F1 SINE Alu 9 117 -32 3 838 267 341 0 11 chr13 33289402 33289491 -86994821 - MTEa LTR MaLR -286 93 6 3 838 432 0 0 0 chr13 33289757 33289805 -86994507 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 838 349 129 14 14 chr13 33290128 33290199 -86994113 + GA-rich Low_complexity Low_complexity 2 72 0 3 838 774 122 0 0 chr13 33290354 33290493 -86993819 + L1_Mus4 LINE L1 6497 6635 -1 3 838 964 291 149 11 chr13 33291919 33292287 -86992025 + MTD LTR MaLR 1 419 0 3 839 3221 183 92 66 chr13 33292896 33293779 -86990533 + RMER17A2 LTR ERVK 1 906 0 3 839 1397 107 29 17 chr13 33295001 33295239 -86989073 + Lx2 LINE L1 5729 5969 -1028 3 839 332 274 48 19 chr13 33296369 33296473 -86987839 + B3 SINE B2 102 208 -8 3 839 24 0 0 0 chr13 33296476 33296500 -86987812 + AT_rich Low_complexity Low_complexity 1 24 0 3 839 2719 179 32 19 chr13 33297074 33297610 -86986702 + RLTR13D1 LTR ERVK 1 543 -359 3 839 2857 67 13 3 chr13 33297583 33297959 -86986353 + RLTR13D1 LTR ERVK 227 606 -200 3 839 1343 291 43 14 chr13 33297953 33298399 -86985913 + RLTR20A2 LTR ERVK 104 562 -16 3 839 5253 177 32 2 chr13 33298978 33300040 -86984272 + Lx3A LINE L1 4 1097 -5887 3 839 1362 35 0 0 chr13 33300055 33300226 -86984086 + L1_Mm LINE L1 4406 4576 -1307 3 839 3871 57 4 0 chr13 33300225 33300731 -86983581 + L1Md_F2 LINE L1 5845 6352 -230 3 839 8060 129 22 16 chr13 33300728 33302343 -86981969 + Lx3A LINE L1 5346 6974 -7 3 839 468 0 0 0 chr13 33302344 33302396 -86981916 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 839 625 255 12 55 chr13 33302749 33303006 -86981306 + RMER3D-int LTR ERVK 1134 1379 -1463 3 839 3044 204 56 33 chr13 33302992 33303773 -86980539 + MYSERV16_I-int LTR ERVK 136 934 -1392 3 839 4887 152 63 1 chr13 33303772 33304812 -86979500 + MYSERV16_I-int LTR ERVK 1199 2303 -23 3 839 318 26 0 0 chr13 33304842 33304881 -86979431 + (TTG)n Simple_repeat Simple_repeat 1 39 0 3 839 180 0 0 0 chr13 33304881 33304901 -86979411 + (TGG)n Simple_repeat Simple_repeat 3 22 0 3 839 353 221 71 48 chr13 33304939 33305070 -86979242 + RLTR20A2 LTR ERVK 1 123 -455 3 839 1741 148 3 3 chr13 33305070 33305362 -86978950 - Lx LINE L1 -265 6389 6098 3 839 1383 142 4 25 chr13 33305365 33305610 -86978702 + Lx LINE L1 6402 6641 -13 3 839 3164 101 122 0 chr13 33305604 33306081 -86978231 + L1_Mus3 LINE L1 6099 6633 -5 3 839 254 313 37 0 chr13 33306270 33306404 -86977908 - L1M5 LINE L1 -510 5669 5531 3 839 23 0 0 0 chr13 33306588 33306611 -86977701 + AT_rich Low_complexity Low_complexity 1 23 0 3 839 21 57 0 0 chr13 33306751 33306786 -86977526 + AT_rich Low_complexity Low_complexity 1 35 0 3 839 29 78 0 0 chr13 33307053 33307117 -86977195 + AT_rich Low_complexity Low_complexity 1 64 0 3 839 956 280 135 62 chr13 33307121 33307559 -86976753 + RLTR20A2 LTR ERVK 93 562 -16 3 839 1101 196 78 8 chr13 33307576 33307833 -86976479 - Lx2B LINE L1 -328 6672 6398 3 839 361 189 28 9 chr13 33307845 33307952 -86976360 + Lx2A1 LINE L1 6896 7004 -4 3 839 568 351 19 0 chr13 33308034 33308245 -86976067 - B3 SINE B2 0 216 2 3 839 4440 120 3 8 chr13 33310842 33311506 -86972806 + L1_Mus4 LINE L1 5961 6621 -15 3 839 29992 79 7 3 chr13 33311506 33316674 -86967638 + L1Md_F2 LINE L1 399 5586 -297 3 839 7512 69 8 16 chr13 33316674 33317678 -86966634 + L1Md_F2 LINE L1 5587 6582 0 3 839 1035 128 0 4 chr13 33317699 33317917 -86966395 + (GAAA)n Simple_repeat Simple_repeat 1 217 0 3 839 630 244 45 0 chr13 33318300 33318476 -86965836 + MLT1B LTR MaLR 68 251 -139 3 839 4983 58 0 1 chr13 33319542 33320266 -86964046 - L1Md_F2 LINE L1 -348 6234 5512 3 839 972 41 0 0 chr13 33320261 33320384 -86963928 + L1Md_F2 LINE L1 6229 6351 -231 3 839 306 340 14 0 chr13 33321201 33321342 -86962970 + L1M3 LINE L1 5318 5460 -720 3 839 396 0 0 0 chr13 33321360 33321404 -86962908 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 839 555 29 0 0 chr13 33321404 33321472 -86962840 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 839 450 0 0 0 chr13 33321797 33321847 -86962465 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 839 37322 33 2 6 chr13 33322285 33328483 -86955829 - L1Md_T LINE L1 0 6582 416 4 839 244 33 0 0 chr13 33328502 33328532 -86955780 + L1Md_F3 LINE L1 5557 5586 -297 4 839 8078 44 1 0 chr13 33328532 33329515 -86954797 + L1Md_F3 LINE L1 5587 6570 -14 4 839 457 135 62 0 chr13 33330226 33330322 -86953990 - MusHAL1 LINE L1 -1964 748 647 4 839 320 305 86 97 chr13 33330927 33331217 -86953095 - ORR1E LTR MaLR 0 359 73 4 839 27 0 0 0 chr13 33331749 33331776 -86952536 + AT_rich Low_complexity Low_complexity 1 27 0 4 839 5628 51 0 0 chr13 33331780 33332469 -86951843 - L1Md_F2 LINE L1 -16 6566 5878 4 839 15563 61 3 1 chr13 33332469 33335066 -86949246 + L1Md_F2 LINE L1 3750 6351 -231 4 839 3438 138 2 0 chr13 33335065 33335647 -86948665 + L1_Mm LINE L1 4633 5215 -668 4 839 27 0 0 0 chr13 33335714 33335741 -86948571 + AT_rich Low_complexity Low_complexity 1 27 0 4 839 2489 222 86 124 chr13 33335764 33336311 -86948001 - ETnERV2-int LTR ERVK -4660 2746 2175 4 839 229 253 57 57 chr13 33336311 33336399 -86947913 - Charlie20a DNA Charlie -510 297 210 4 839 2489 222 86 124 chr13 33336399 33336838 -86947474 - ETnERV2-int LTR ERVK -4660 2174 1714 4 839 1195 202 101 33 chr13 33336840 33337360 -86946952 - ETnERV2-int LTR ERVK -5469 668 255 4 839 382 103 26 0 chr13 33337605 33337683 -86946629 + (TTTTA)n Simple_repeat Simple_repeat 1 80 0 4 839 454 242 42 48 chr13 33338010 33338175 -86946137 - RLTR43A LTR ERVK 0 364 201 4 839 4347 129 23 68 chr13 33339975 33340816 -86943496 - RLTR13B4 LTR ERVK 0 803 1 4 839 388 296 0 10 chr13 33340818 33340917 -86943395 + B3 SINE B2 111 208 -8 4 839 367 264 112 41 chr13 33342747 33342917 -86941395 - L1M4b LINE L1 -5391 1943 1762 4 839 1583 26 5 5 chr13 33342919 33343110 -86941202 - B2_Mm1a SINE B2 -2 191 1 4 839 441 349 128 8 chr13 33343858 33344092 -86940220 + RLTR19 LTR ERVK 281 715 0 4 839 304 308 11 21 chr13 33344263 33344356 -86939956 + PB1D10 SINE Alu 2 93 -24 4 839 311 318 11 22 chr13 33344986 33345076 -86939236 + PB1D10 SINE Alu 9 97 -20 4 839 21 0 0 0 chr13 33346159 33346180 -86938132 + AT_rich Low_complexity Low_complexity 1 21 0 4 839 257 338 0 14 chr13 33346401 33346473 -86937839 - MTEa LTR MaLR -286 93 23 4 839 225 0 0 0 chr13 33346755 33346780 -86937532 + (TC)n Simple_repeat Simple_repeat 1 25 0 4 839 537 44 0 0 chr13 33346780 33346847 -86937465 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 839 399 41 0 0 chr13 33347174 33347223 -86937089 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 839 764 129 8 0 chr13 33347390 33347522 -86936790 + L1_Mus4 LINE L1 6497 6629 -7 4 839 241 325 0 13 chr13 33348527 33348605 -86935707 - MTEb LTR MaLR -24 355 279 4 839 235 304 120 82 chr13 33348670 33348878 -86935434 - MTEb LTR MaLR -137 222 7 4 839 892 283 108 8 chr13 33348951 33349332 -86934980 + MTD LTR MaLR 1 419 0 4 839 3233 176 109 88 chr13 33349939 33350825 -86933487 + RMER17A2 LTR ERVK 1 905 -1 4 839 383 332 86 20 chr13 33352877 33353074 -86931238 + B3 SINE B2 7 216 0 4 839 2382 118 16 0 chr13 33353090 33353512 -86930800 + Lx2 LINE L1 5536 5969 -1028 4 839 341 277 19 38 chr13 33354963 33355068 -86929244 + B3 SINE B2 103 205 -11 4 839 24 0 0 0 chr13 33355076 33355100 -86929212 + AT_rich Low_complexity Low_complexity 1 24 0 4 839 2350 227 47 37 chr13 33357246 33357714 -86926598 + RLTR20B3 LTR ERVK 1 484 -93 4 839 556 67 22 0 chr13 33357714 33357804 -86926508 + (TG)n Simple_repeat Simple_repeat 1 92 0 4 839 2350 227 47 37 chr13 33357804 33357906 -86926406 + RLTR20B3 LTR ERVK 485 577 0 4 839 261 326 35 0 chr13 33357995 33358081 -86926231 + MTD LTR MaLR 260 348 -71 4 839 8976 101 4 8 chr13 33358898 33361036 -86923276 - L1_Mus1 LINE L1 0 6567 4440 4 839 345 269 44 7 chr13 33361107 33361242 -86923070 + L1Md_F LINE L1 664 803 -5813 4 839 2169 199 17 0 chr13 33361250 33361723 -86922589 + L1Md_F LINE L1 725 1205 -5411 4 839 437 208 0 10 chr13 33361730 33361832 -86922480 + L1Md_F LINE L1 1008 1108 -5411 4 839 23224 128 4 8 chr13 33361845 33362436 -86921876 + L1Md_F LINE L1 1112 1703 -4180 4 839 1191 42 14 0 chr13 33362436 33362580 -86921732 + B1_Mm SINE Alu 2 147 0 4 839 23224 130 7 12 chr13 33362580 33362608 -86921704 + L1Md_F LINE L1 1704 1704 -4179 4 839 351 0 0 0 chr13 33362608 33362647 -86921665 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 839 23224 130 7 12 chr13 33362647 33363827 -86920485 + L1Md_F LINE L1 1704 2879 -3004 4 839 471 35 0 0 chr13 33363827 33363884 -86920428 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 839 23224 130 7 12 chr13 33363884 33366201 -86918111 + L1Md_F LINE L1 2880 5206 -677 4 839 324 330 11 16 chr13 33366810 33366998 -86917314 + L1MB5 LINE L1 4917 5103 -1043 4 839 321 315 63 0 chr13 33367098 33367225 -86917087 + L1MB5 LINE L1 5918 6052 -122 4 839 182 83 0 53 chr13 33367271 33367309 -86917003 + (TTA)n Simple_repeat Simple_repeat 3 38 0 4 839 1898 178 16 1 chr13 33367393 33367856 -86916456 + L1VL4 LINE L1 443 942 -5393 4 839 329 143 58 105 chr13 33367856 33367942 -86916370 + RLTR25B LTR ERVK 428 509 -519 4 839 612 60 60 0 chr13 33367884 33367968 -86916344 + B1_Mus2 SINE Alu 47 135 -12 4 839 858 20 0 0 chr13 33367969 33368069 -86916243 + (GAA)n Simple_repeat Simple_repeat 2 101 0 4 839 10518 149 67 14 chr13 33368080 33370519 -86913793 + L1_Mur1 LINE L1 1276 3829 -2057 4 839 234 0 0 0 chr13 33370519 33370545 -86913767 + (TA)n Simple_repeat Simple_repeat 2 27 0 4 839 10233 176 78 12 chr13 33370545 33370611 -86913701 + L1_Mur1 LINE L1 3830 3946 -1940 4 839 5296 62 0 0 chr13 33372571 33373231 -86911081 + L1Md_F2 LINE L1 5920 6579 -3 4 839 456 297 34 0 chr13 33373757 33373875 -86910437 - B1_Mur2 SINE Alu -14 135 14 4 839 320 296 194 28 chr13 33374837 33374996 -86909316 + L1M3 LINE L1 5318 5510 -668 4 839 426 39 0 0 chr13 33374996 33375048 -86909264 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 839 258 296 194 28 chr13 33375048 33375249 -86909063 + L1M3 LINE L1 5511 5737 -441 4 839 471 18 0 0 chr13 33375455 33375511 -86908801 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 839 461 158 69 0 chr13 33376652 33376753 -86907559 - MusHAL1 LINE L1 -1964 748 641 4 839 3933 76 1 1 chr13 33377832 33378376 -86905936 - RLTR45-int LTR ERVK -414 6830 6331 4 839 640 120 55 16 chr13 33378604 33378731 -86905581 - RLTR45-int LTR ERVK -6211 1033 902 4 839 1571 52 43 0 chr13 33378837 33379047 -86905265 - RLTR45-int LTR ERVK -6334 910 692 4 839 1079 35 0 40 chr13 33379403 33379553 -86904759 - RLTR45-int LTR ERVK -6552 692 549 4 839 3777 92 25 19 chr13 33380331 33380899 -86903413 - RLTR45-int LTR ERVK -6673 571 1 4 839 2721 94 130 12 chr13 33380899 33381330 -86902982 - RLTR45 LTR ERVK 0 482 1 4 839 2643 270 45 21 chr13 33381336 33382237 -86902075 - MERVL_2A-int LTR ERVL -2498 3263 2341 4 839 1692 219 35 94 chr13 33382237 33382727 -86901585 - RMER4A LTR ERVK 0 466 6 4 839 6428 259 50 17 chr13 33382744 33384951 -86899361 - MERVL_2A-int LTR ERVL -3250 2235 36 4 839 915 219 31 111 chr13 33384987 33385337 -86898975 + RLTRETN_Mm LTR ERVK 1 322 0 4 839 8670 189 76 87 chr13 33385339 33388514 -86895798 + MMETn-int LTR ERVK 3 3141 -1703 4 839 1386 193 5 5 chr13 33388538 33388762 -86895550 + ETnERV2-int LTR ERVK 6987 7210 -196 4 839 483 247 268 10 chr13 33388764 33389063 -86895249 + RLTR13D6 LTR ERVK 162 537 -365 4 839 322 127 52 78 chr13 33389063 33389140 -86895172 + ETnERV2-int LTR ERVK 7329 7403 -3 4 839 312 259 6 201 chr13 33389142 33389321 -86894991 + RLTRETN_Mm LTR ERVK 1 144 -178 4 839 10857 159 15 10 chr13 33389351 33391848 -86892464 + L1VL4 LINE L1 401 2905 -654 4 839 38786 35 2 7 chr13 33391849 33397990 -86886322 + L1Md_A LINE L1 423 6526 -56 4 839 582 222 46 9 chr13 33397990 33398168 -86886144 - RMER16-int LTR ERVK -3573 1833 1672 4 839 2751 190 6 26 chr13 33398190 33398760 -86885552 - RMER16-int LTR ERVK -2567 2839 2303 4 839 7144 143 14 50 chr13 33398760 33400511 -86883801 - L1Md_F LINE L1 -3505 2378 708 4 839 375 284 17 8 chr13 33400511 33400628 -86883684 - L1Md_F LINE L1 -5824 792 675 4 839 22137 121 5 1 chr13 33400793 33404985 -86879327 + L1_Mus1 LINE L1 2359 6567 0 4 839 4306 212 19 56 chr13 33405121 33406194 -86878118 - ETnERV2-int LTR ERVK -4660 2746 1714 4 839 1887 188 147 54 chr13 33406198 33406715 -86877597 - ETnERV2-int LTR ERVK -4587 819 255 4 839 37573 43 0 2 chr13 33406832 33412910 -86871402 - L1Md_T LINE L1 0 6585 424 4 839 235 108 0 26 chr13 33412910 33412948 -86871364 - L1Md_T LINE L1 -6413 109 73 4 839 432 75 62 0 chr13 33413083 33413163 -86871149 + (TTTTA)n Simple_repeat Simple_repeat 1 85 0 4 839 262 289 11 11 chr13 33413212 33413303 -86871009 - ETnERV2-int LTR ERVK -7948 269 179 4 839 412 256 43 49 chr13 33413491 33413655 -86870657 - RLTR43A LTR ERVK 0 364 202 4 839 1132 109 19 7 chr13 33414720 33414918 -86869394 - RLTR13B1 LTR ERVK -106 917 696 4 839 2294 122 17 3 chr13 33414904 33415265 -86869047 - RLTR13B1 LTR ERVK -524 369 4 4 839 383 296 0 10 chr13 33415272 33415371 -86868941 + B3 SINE B2 111 208 -8 4 839 863 93 7 0 chr13 33417213 33417353 -86866959 + (TC)n Simple_repeat Simple_repeat 2 142 0 4 839 410 356 69 13 chr13 33418085 33418333 -86865979 + RLTR19 LTR ERVK 229 506 0 4 839 444 254 97 78 chr13 33418456 33418610 -86865702 + B4 SINE B4 67 223 -69 4 839 914 87 8 0 chr13 33418486 33418612 -86865700 + B1_Mm SINE Alu 21 147 0 4 839 272 310 0 14 chr13 33420786 33420858 -86863454 - MTEa LTR MaLR -286 93 23 4 839 408 20 0 0 chr13 33421147 33421196 -86863116 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 839 1273 51 11 0 chr13 33421516 33421694 -86862618 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 839 688 136 8 8 chr13 33421862 33421995 -86862317 + L1_Mus4 LINE L1 6497 6629 -7 4 839 244 325 0 13 chr13 33422996 33423074 -86861238 - ORR1E LTR MaLR -24 355 279 4 839 250 337 96 62 chr13 33423139 33423348 -86860964 - ORR1E LTR MaLR -137 222 7 4 840 899 291 120 5 chr13 33423421 33423797 -86860515 + MTD LTR MaLR 1 419 0 4 840 3000 207 90 56 chr13 33424406 33425282 -86859030 + RMER17A2 LTR ERVK 1 906 0 4 840 468 0 0 0 chr13 33425431 33425483 -86858829 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 840 270 0 0 0 chr13 33426081 33426111 -86858201 + (T)n Simple_repeat Simple_repeat 1 30 0 4 840 226 228 0 71 chr13 33426373 33426458 -86857854 - Tigger7 DNA MER2_type -1675 816 738 4 840 410 335 58 0 chr13 33427405 33427578 -86856734 + B3 SINE B2 23 205 -11 4 840 23 0 0 0 chr13 33427582 33427605 -86856707 + AT_rich Low_complexity Low_complexity 1 23 0 4 840 2535 115 16 0 chr13 33427614 33428036 -86856276 + Lx2 LINE L1 5536 5969 -1028 4 840 356 276 9 45 chr13 33429488 33429598 -86854714 + B3 SINE B2 103 208 -8 4 840 24 0 0 0 chr13 33429601 33429625 -86854687 + AT_rich Low_complexity Low_complexity 1 24 0 4 840 2391 218 45 45 chr13 33431770 33432244 -86852068 + RLTR20B3 LTR ERVK 1 484 -93 4 840 803 53 9 0 chr13 33432244 33432357 -86851955 + (TG)n Simple_repeat Simple_repeat 1 114 0 4 840 2391 218 45 45 chr13 33432357 33432459 -86851853 + RLTR20B3 LTR ERVK 485 577 0 4 840 249 337 35 0 chr13 33432548 33432634 -86851678 + MTD LTR MaLR 260 348 -71 4 840 9535 100 4 3 chr13 33433451 33435383 -86848929 - L1_Mus1 LINE L1 0 6567 4631 4 840 210 37 0 0 chr13 33435383 33435410 -86848902 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 4 840 9535 116 6 3 chr13 33435410 33435600 -86848712 - L1_Mus1 LINE L1 -1253 4630 4440 4 840 387 269 44 7 chr13 33435671 33435806 -86848506 + L1Md_F LINE L1 664 803 -5813 4 840 2332 199 17 0 chr13 33435814 33436287 -86848025 + L1Md_F LINE L1 725 1205 -5411 4 840 235 88 0 0 chr13 33436258 33436292 -86848020 + L1Md_F LINE L1 1014 1047 -5472 5 840 530 188 0 0 chr13 33436294 33436395 -86847917 + L1Md_F LINE L1 1008 1108 -5411 5 840 23327 132 30 3 chr13 33436392 33436999 -86847313 + L1Md_F LINE L1 1092 1703 -4180 4 840 1165 49 14 0 chr13 33436999 33437143 -86847169 + B1_Mm SINE Alu 2 147 0 5 840 23327 131 33 4 chr13 33437143 33438224 -86846088 + L1Md_F LINE L1 1704 2871 -3012 4 840 663 48 0 0 chr13 33438224 33438307 -86846005 + (GA)n Simple_repeat Simple_repeat 2 84 0 5 840 23327 131 33 4 chr13 33438307 33440617 -86843695 + L1Md_F LINE L1 2872 5206 -677 4 840 327 340 11 16 chr13 33441227 33441415 -86842897 + L1MB5 LINE L1 4917 5103 -1043 5 840 225 309 64 0 chr13 33441532 33441642 -86842670 + L1MB5 LINE L1 5936 6052 -122 5 840 182 83 0 53 chr13 33441688 33441726 -86842586 + (TTA)n Simple_repeat Simple_repeat 3 38 0 5 840 2002 178 16 1 chr13 33441810 33442273 -86842039 + L1VL4 LINE L1 443 942 -5393 5 840 326 143 58 105 chr13 33442273 33442359 -86841953 + RLTR25B LTR ERVK 428 509 -519 5 840 622 80 57 0 chr13 33442301 33442389 -86841923 + B1_Mus2 SINE Alu 47 139 -8 5 840 870 10 0 0 chr13 33442390 33442489 -86841823 + (GAA)n Simple_repeat Simple_repeat 3 101 0 5 840 10739 147 72 14 chr13 33442500 33444800 -86839512 + L1_Mur1 LINE L1 1276 3693 -2193 5 840 1894 40 0 0 chr13 33444800 33445026 -86839286 + L1Md_T LINE L1 6356 6581 -1 5 840 9558 172 84 14 chr13 33445026 33445165 -86839147 + L1_Mur1 LINE L1 3694 3829 -2057 5 840 213 39 0 0 chr13 33445165 33445191 -86839121 + (TA)n Simple_repeat Simple_repeat 2 27 0 5 840 9558 172 84 14 chr13 33445191 33445257 -86839055 + L1_Mur1 LINE L1 3830 3946 -1940 5 840 5355 49 0 0 chr13 33447201 33447850 -86836462 + L1Md_F2 LINE L1 5920 6568 -14 5 840 423 305 34 0 chr13 33448389 33448507 -86835805 - B1_Mur2 SINE Alu -14 135 14 5 840 320 296 194 28 chr13 33449470 33449629 -86834683 + L1M3 LINE L1 5318 5510 -668 5 840 462 36 0 0 chr13 33449629 33449685 -86834627 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 840 258 296 194 28 chr13 33449685 33449886 -86834426 + L1M3 LINE L1 5511 5737 -441 5 840 501 17 0 0 chr13 33450092 33450150 -86834162 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 840 461 158 69 0 chr13 33451291 33451392 -86832920 - MusHAL1 LINE L1 -1964 748 641 5 840 3933 76 1 1 chr13 33452471 33453015 -86831297 - RLTR45-int LTR ERVK -414 6830 6331 5 840 640 120 55 16 chr13 33453243 33453370 -86830942 - RLTR45-int LTR ERVK -6211 1033 902 5 840 1571 52 43 0 chr13 33453476 33453686 -86830626 - RLTR45-int LTR ERVK -6334 910 692 5 840 1079 35 0 40 chr13 33454042 33454192 -86830120 - RLTR45-int LTR ERVK -6552 692 549 5 840 180 0 0 0 chr13 33454361 33454381 -86829931 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 840 3777 92 25 19 chr13 33454968 33455536 -86828776 - RLTR45-int LTR ERVK -6673 571 1 5 840 2732 96 130 9 chr13 33455536 33455966 -86828346 - RLTR45 LTR ERVK 0 482 1 5 840 2636 270 45 21 chr13 33455972 33456873 -86827439 - MERVL_2A-int LTR ERVL -2498 3263 2341 5 840 1692 219 35 94 chr13 33456873 33457363 -86826949 - RMER4A LTR ERVK 0 466 6 5 840 6428 259 50 17 chr13 33457380 33459587 -86824725 - MERVL_2A-int LTR ERVL -3250 2235 36 5 840 928 215 31 111 chr13 33459623 33459973 -86824339 + RLTRETN_Mm LTR ERVK 1 322 0 5 840 8623 184 80 90 chr13 33459975 33460481 -86823831 + MMETn-int LTR ERVK 3 476 -4368 5 840 225 0 0 0 chr13 33460481 33460506 -86823806 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5 840 8623 184 80 90 chr13 33460506 33463169 -86821143 + MMETn-int LTR ERVK 477 3140 -1704 5 840 1322 196 0 4 chr13 33463193 33463418 -86820894 + ETnERV2-int LTR ERVK 6987 7210 -196 5 840 482 243 268 10 chr13 33463420 33463719 -86820593 + RLTR13D6 LTR ERVK 162 537 -365 5 840 298 127 52 78 chr13 33463719 33463796 -86820516 + ETnERV2-int LTR ERVK 7329 7403 -3 5 840 336 216 28 228 chr13 33463798 33463978 -86820334 + RLTRETN_Mm LTR ERVK 1 144 -178 5 840 2904 169 16 15 chr13 33464008 33465053 -86819259 + L1VL4 LINE L1 756 1798 -4088 5 840 33812 35 1 0 chr13 33465054 33471295 -86813017 + L1Md_T LINE L1 1 5589 -297 5 840 9003 7 0 0 chr13 33471295 33472291 -86812021 + L1Md_T LINE L1 5590 6585 0 5 840 8052 151 11 6 chr13 33472300 33473854 -86810458 + MusHAL1 LINE L1 584 2145 -567 5 840 22756 89 11 4 chr13 33473849 33477259 -86807053 + L1Md_F2 LINE L1 2326 5761 -122 5 840 2260 82 21 6 chr13 33477259 33477589 -86806723 + L1Md_F2 LINE L1 6247 6581 -1 5 840 5682 85 6 4 chr13 33477578 33478360 -86805952 + L1Md_F2 LINE L1 5780 6563 -19 5 840 843 184 46 6 chr13 33478889 33479064 -86805248 - ETnERV2-int LTR ERVK -1430 3976 3795 5 840 2436 222 33 41 chr13 33479131 33479725 -86804587 - ETnERV2-int LTR ERVK -1625 5781 5188 5 840 1048 90 7 0 chr13 33479725 33479869 -86804443 - B1_Mus2 SINE Alu -1 146 2 5 840 2436 222 33 41 chr13 33479869 33479936 -86804376 - ETnERV2-int LTR ERVK -2219 5187 5125 5 840 245 184 0 0 chr13 33479936 33479974 -86804338 + RLTR13D3 LTR ERVK 1 38 -1076 5 840 2119 256 33 19 chr13 33479996 33480701 -86803611 - ETnERV2-int LTR ERVK -2872 4534 4086 5 840 2624 183 11 28 chr13 33480723 33481269 -86803043 - RMER16-int LTR ERVK -2567 2839 2303 5 840 6838 127 12 54 chr13 33481290 33483001 -86801311 - L1Md_F LINE L1 -3505 2378 757 5 840 404 260 16 8 chr13 33483039 33483167 -86801145 - L1Md_F LINE L1 -5813 803 675 5 840 21213 121 4 0 chr13 33483332 33487244 -86797068 + L1_Mus1 LINE L1 2359 6282 -285 5 840 269 125 18 0 chr13 33487246 33487302 -86797010 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 840 435 338 64 12 chr13 33488043 33488277 -86796035 + RLTR19 LTR ERVK 321 715 0 5 840 417 259 99 80 chr13 33488400 33488551 -86795761 + B4 SINE B4 67 220 -72 5 840 880 102 0 30 chr13 33488429 33488561 -86795751 + B1_Mm SINE Alu 20 147 0 5 840 215 352 110 0 chr13 33488588 33488679 -86795633 + PB1 SINE Alu 2 102 -25 5 840 306 296 41 13 chr13 33489317 33489414 -86794898 + B1F1 SINE Alu 15 116 -1 5 840 289 296 0 14 chr13 33490732 33490804 -86793508 - MTEa LTR MaLR -286 93 23 5 840 618 14 0 0 chr13 33491089 33491160 -86793152 + (CA)n Simple_repeat Simple_repeat 2 72 0 5 840 951 78 0 0 chr13 33491480 33491609 -86792703 + (GAAA)n Simple_repeat Simple_repeat 1 129 0 5 840 678 143 8 8 chr13 33491764 33491898 -86792414 + L1_Mus4 LINE L1 6497 6630 -6 5 840 244 339 101 62 chr13 33493046 33493254 -86791058 - ORR1E LTR MaLR -137 222 7 5 840 899 289 120 5 chr13 33493327 33493703 -86790609 + MTD LTR MaLR 1 419 0 5 840 3045 206 90 56 chr13 33494312 33495188 -86789124 + RMER17A2 LTR ERVK 1 906 0 5 840 533 42 0 14 chr13 33495342 33495415 -86788897 + (TA)n Simple_repeat Simple_repeat 1 72 0 5 840 242 215 0 71 chr13 33496288 33496373 -86787939 - Tigger7 DNA MER2_type -1675 816 738 5 840 394 337 53 6 chr13 33497320 33497490 -86786822 + B3 SINE B2 23 200 -16 5 840 2447 109 16 0 chr13 33497526 33497948 -86786364 + Lx2 LINE L1 5536 5969 -1028 5 840 347 267 19 38 chr13 33499400 33499505 -86784807 + B3 SINE B2 103 205 -11 5 840 24 0 0 0 chr13 33499513 33499537 -86784775 + AT_rich Low_complexity Low_complexity 1 24 0 5 840 2365 223 45 45 chr13 33501684 33502158 -86782154 + RLTR20B3 LTR ERVK 1 484 -93 1 840 842 43 9 0 chr13 33502158 33502273 -86782039 + (TG)n Simple_repeat Simple_repeat 1 116 0 2 840 2365 223 45 45 chr13 33502273 33502375 -86781937 + RLTR20B3 LTR ERVK 485 577 0 1 840 259 326 35 0 chr13 33502464 33502550 -86781762 + MTD LTR MaLR 260 348 -71 3 840 8976 104 5 2 chr13 33503367 33505297 -86779015 - L1_Mus1 LINE L1 0 6567 4631 4 840 210 37 0 0 chr13 33505297 33505324 -86778988 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 5 840 8976 118 6 3 chr13 33505324 33505514 -86778798 - L1_Mus1 LINE L1 -1253 4630 4440 4 840 325 276 44 7 chr13 33505585 33505720 -86778592 + L1Md_F LINE L1 664 803 -5813 6 840 2180 197 17 0 chr13 33505728 33506201 -86778111 + L1Md_F LINE L1 725 1205 -5411 6 840 500 188 0 0 chr13 33506208 33506309 -86778003 + L1Md_F LINE L1 1008 1108 -5411 7 840 20042 130 23 3 chr13 33506322 33506912 -86777400 + L1Md_F LINE L1 1112 1703 -4180 6 840 1160 56 14 0 chr13 33506912 33507056 -86777256 + B1_Mm SINE Alu 2 147 0 8 840 20042 134 39 5 chr13 33507056 33508119 -86776193 + L1Md_F LINE L1 1704 2871 -3012 6 840 981 49 0 0 chr13 33508119 33508242 -86776070 + (GA)n Simple_repeat Simple_repeat 2 124 0 9 840 20042 134 39 5 chr13 33508242 33510300 -86774012 + L1Md_F LINE L1 2872 4945 -938 6 840 36345 30 0 0 chr13 33510302 33516519 -86767793 - L1Md_T LINE L1 0 6585 271 1 840 1913 115 0 0 chr13 33516519 33516805 -86767507 + L1Md_F LINE L1 4922 5207 -676 6 840 329 330 11 16 chr13 33517413 33517601 -86766711 + L1MB5 LINE L1 4917 5103 -1043 1 840 323 315 63 0 chr13 33517701 33517828 -86766484 + L1MB5 LINE L1 5918 6052 -122 1 840 182 83 0 53 chr13 33517874 33517912 -86766400 + (TTA)n Simple_repeat Simple_repeat 3 38 0 1 840 1867 182 12 1 chr13 33517996 33518475 -86765837 + L1VL4 LINE L1 443 942 -5393 1 840 293 169 58 105 chr13 33518475 33518561 -86765751 + RLTR25B LTR ERVK 428 509 -519 1 840 585 102 57 0 chr13 33518503 33518591 -86765721 + B1_Mus2 SINE Alu 47 139 -8 1 840 951 9 0 0 chr13 33518592 33518700 -86765612 + (GAA)n Simple_repeat Simple_repeat 3 110 0 1 840 10566 149 68 14 chr13 33518711 33521148 -86763164 + L1_Mur1 LINE L1 1276 3828 -2058 1 840 597 28 0 0 chr13 33521148 33521219 -86763093 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 840 315 0 0 0 chr13 33521219 33521253 -86763059 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 840 10292 174 79 13 chr13 33521253 33521321 -86762991 + L1_Mur1 LINE L1 3829 3946 -1940 1 840 5165 58 0 9 chr13 33523263 33523918 -86760394 + L1Md_F2 LINE L1 5920 6568 -14 2 840 447 297 34 0 chr13 33524457 33524575 -86759737 - B1_Mur2 SINE Alu -14 135 14 2 840 320 296 194 28 chr13 33525538 33525697 -86758615 + L1M3 LINE L1 5318 5510 -668 2 840 429 20 0 0 chr13 33525697 33525747 -86758565 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 840 258 296 194 28 chr13 33525747 33525948 -86758364 + L1M3 LINE L1 5511 5737 -441 2 840 357 24 0 0 chr13 33526154 33526196 -86758116 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 840 470 148 69 0 chr13 33527336 33527437 -86756875 - MusHAL1 LINE L1 -1964 748 641 2 840 1250 208 22 17 chr13 33528649 33529006 -86755306 + L1_Mur2 LINE L1 1625 1983 -3894 2 840 758 180 6 6 chr13 33529036 33529225 -86755087 + L1_Mur2 LINE L1 3142 3314 -2826 2 840 372 174 62 37 chr13 33529306 33529314 -86754998 + (TA)n Simple_repeat Simple_repeat 2 9 0 2 840 570 15 0 0 chr13 33529314 33529381 -86754931 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2 840 372 174 62 37 chr13 33529381 33529533 -86754779 + (TA)n Simple_repeat Simple_repeat 1 157 0 2 840 2960 24 0 0 chr13 33529534 33529871 -86754441 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 840 52830 22 17 7 chr13 33529871 33536280 -86748032 + IAPEz-int LTR ERVK 8 6481 0 3 840 2960 24 0 0 chr13 33536280 33536617 -86747695 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 840 190 271 21 0 chr13 33536617 33536713 -86747599 + (TA)n Simple_repeat Simple_repeat 2 99 0 3 840 2886 113 25 39 chr13 33536713 33537202 -86747110 - RLTR45 LTR ERVK 0 482 1 3 840 7146 71 1 1 chr13 33537204 33538162 -86746150 - RLTR45-int LTR ERVK -468 7749 6331 3 840 634 158 39 0 chr13 33538389 33538516 -86745796 - RLTR45-int LTR ERVK -6211 1033 902 3 840 1571 52 43 0 chr13 33538623 33538833 -86745479 - RLTR45-int LTR ERVK -6334 910 692 3 840 1079 35 0 40 chr13 33539189 33539339 -86744973 - RLTR45-int LTR ERVK -6552 692 549 3 840 180 0 0 0 chr13 33539508 33539528 -86744784 + (TG)n Simple_repeat Simple_repeat 1 20 0 3 840 3764 93 25 19 chr13 33540116 33540684 -86743628 - RLTR45-int LTR ERVK -6673 571 1 3 840 2608 95 142 16 chr13 33540684 33541112 -86743200 - RLTR45 LTR ERVK 0 482 1 3 840 2524 276 45 21 chr13 33541118 33542019 -86742293 - MERVL_2A-int LTR ERVL -2498 3263 2341 3 840 1683 219 35 96 chr13 33542019 33542510 -86741802 - RMER4A LTR ERVK 0 466 6 3 840 6333 259 50 19 chr13 33542527 33544739 -86739573 - MERVL_2A-int LTR ERVL -3250 2235 36 3 840 841 225 31 111 chr13 33544775 33545125 -86739187 + RLTRETN_Mm LTR ERVK 1 322 0 3 840 8673 184 79 89 chr13 33545127 33545633 -86738679 + MMETn-int LTR ERVK 3 476 -4368 3 840 183 42 0 0 chr13 33545633 33545657 -86738655 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 840 8673 184 79 89 chr13 33545657 33548321 -86735991 + MMETn-int LTR ERVK 477 3140 -1704 3 840 269 207 0 17 chr13 33548290 33548349 -86735963 + ETnERV2-int LTR ERVK 6127 6184 -1222 3 840 1333 193 5 5 chr13 33548345 33548569 -86735743 + ETnERV2-int LTR ERVK 6987 7210 -196 3 840 456 242 203 5 chr13 33548571 33548783 -86735529 + RLTR13D6 LTR ERVK 162 415 -487 4 840 501 227 61 12 chr13 33548783 33548948 -86735364 + MMETn-int LTR ERVK 4672 4844 0 3 840 334 212 40 208 chr13 33548948 33549121 -86735191 + RLTRETN_Mm LTR ERVK 1 144 -178 3 840 10968 156 13 9 chr13 33549151 33551737 -86732575 + L1VL4 LINE L1 401 2992 -567 4 1 22638 92 10 3 chr13 33551732 33555144 -86729168 + L1Md_F2 LINE L1 2326 5761 -122 4 841 2410 65 3 6 chr13 33555144 33555468 -86728844 + L1Md_F2 LINE L1 6247 6569 -13 4 841 5814 76 8 3 chr13 33555463 33556240 -86728072 + L1Md_F2 LINE L1 5783 6563 -19 4 841 860 184 46 6 chr13 33556769 33556944 -86727368 - ETnERV2-int LTR ERVK -1430 3976 3795 4 841 2411 225 33 41 chr13 33557010 33557604 -86726708 - ETnERV2-int LTR ERVK -1625 5781 5188 4 841 1024 104 7 0 chr13 33557604 33557748 -86726564 - B1_Mus2 SINE Alu -1 146 2 4 841 2411 225 33 41 chr13 33557748 33557815 -86726497 - ETnERV2-int LTR ERVK -2219 5187 5125 4 841 245 184 0 0 chr13 33557815 33557853 -86726459 + RLTR13D3 LTR ERVK 1 38 -1076 4 841 2126 256 33 18 chr13 33557875 33558580 -86725732 - ETnERV2-int LTR ERVK -2872 4534 4086 4 841 2610 190 9 26 chr13 33558602 33559148 -86725164 - RMER16-int LTR ERVK -2567 2839 2303 4 841 6749 130 12 57 chr13 33559169 33560919 -86723393 - L1Md_F LINE L1 -3505 2378 725 4 841 404 260 16 8 chr13 33560926 33561054 -86723258 - L1Md_F LINE L1 -5813 803 675 4 841 20684 128 5 0 chr13 33561219 33564622 -86719690 + L1_Mm LINE L1 2359 5777 -106 5 841 33897 44 3 3 chr13 33564621 33569841 -86714471 + L1Md_T LINE L1 271 5589 -297 5 841 8473 34 0 0 chr13 33569841 33570837 -86713475 + L1Md_T LINE L1 5590 6585 0 5 841 5788 101 0 0 chr13 33570841 33571644 -86712668 + L1_Mus1 LINE L1 5765 6567 0 5 841 25 51 0 0 chr13 33571713 33571752 -86712560 + AT_rich Low_complexity Low_complexity 1 39 0 5 841 4110 208 19 55 chr13 33571780 33572852 -86711460 - ETnERV2-int LTR ERVK -4660 2746 1714 4 841 1778 178 147 54 chr13 33572856 33573373 -86710939 - ETnERV2-int LTR ERVK -4587 819 255 4 841 201 183 0 0 chr13 33573602 33573662 -86710650 + T-rich Low_complexity Low_complexity 1 60 0 5 841 473 242 42 48 chr13 33573991 33574156 -86710156 - RLTR43A LTR ERVK 0 364 201 5 841 3754 155 114 7 chr13 33575241 33575989 -86708323 - RLTR13B3 LTR ERVK -97 832 5 5 841 418 276 0 10 chr13 33575997 33576096 -86708216 + B3 SINE B2 111 208 -8 5 841 542 154 8 0 chr13 33577932 33578062 -86706250 + CT-rich Low_complexity Low_complexity 2 132 0 5 841 435 338 64 12 chr13 33578803 33579037 -86705275 + RLTR19 LTR ERVK 321 715 0 5 841 377 273 99 80 chr13 33579160 33579311 -86705001 + B4 SINE B4 67 220 -72 6 841 841 117 0 30 chr13 33579189 33579321 -86704991 + B1_Mm SINE Alu 20 147 0 6 841 224 341 110 0 chr13 33579348 33579439 -86704873 + PB1 SINE Alu 2 102 -25 6 841 306 296 41 13 chr13 33580077 33580174 -86704138 + B1F1 SINE Alu 15 116 -1 6 841 289 296 0 14 chr13 33581492 33581564 -86702748 - MTEa LTR MaLR -286 93 23 6 841 456 19 0 0 chr13 33581854 33581907 -86702405 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 841 1176 81 0 0 chr13 33582227 33582388 -86701924 + (GAAA)n Simple_repeat Simple_repeat 1 161 0 6 841 678 143 8 8 chr13 33582543 33582677 -86701635 + L1_Mus4 LINE L1 6497 6630 -6 6 841 226 344 101 62 chr13 33583825 33584033 -86700279 - ORR1E LTR MaLR -137 222 7 6 841 1163 278 120 5 chr13 33584106 33584482 -86699830 + MTD LTR MaLR 1 419 0 6 841 3057 180 140 106 chr13 33585090 33585966 -86698346 + RMER17A2 LTR ERVK 1 906 0 7 841 261 202 0 71 chr13 33587003 33587088 -86697224 - Tigger7 DNA MER2_type -1675 816 738 7 841 22 0 0 0 chr13 33587842 33587864 -86696448 + AT_rich Low_complexity Low_complexity 1 22 0 7 841 380 347 58 0 chr13 33588038 33588211 -86696101 + B3 SINE B2 23 205 -11 7 841 2390 115 16 0 chr13 33588253 33588663 -86695649 + Lx2 LINE L1 5548 5969 -1028 7 841 323 292 9 45 chr13 33589803 33589914 -86694398 + B3 SINE B2 102 208 -8 7 841 24 0 0 0 chr13 33589917 33589941 -86694371 + AT_rich Low_complexity Low_complexity 1 24 0 7 841 264 111 0 0 chr13 33590603 33590639 -86693673 - U2 snRNA snRNA -152 36 1 7 841 9987 79 20 3 chr13 33591377 33593482 -86690830 - L1Md_F2 LINE L1 -12 6570 4427 7 841 31717 107 16 10 chr13 33593481 33599767 -86684545 - L1Md_F2 LINE L1 -12 6570 244 7 841 942 167 0 24 chr13 33599767 33599933 -86684379 - L1Md_F2 LINE L1 -6260 378 217 7 841 233 361 58 40 chr13 33601186 33601218 -86683094 - MT2A LTR ERVL -298 235 7 8 841 325 304 124 47 chr13 33601218 33601411 -86682901 - MTEa LTR MaLR -165 214 7 8 841 1196 235 26 43 chr13 33602450 33602752 -86681560 + RMER12 LTR ERVK 1 297 -1025 8 841 286 290 77 38 chr13 33602780 33602963 -86681349 + RMER12 LTR ERVK 607 796 -1052 8 841 432 271 34 130 chr13 33602967 33603134 -86681178 + RMER12 LTR ERVK 1153 1304 -544 8 841 531 31 0 0 chr13 33603134 33603199 -86681113 + (CA)n Simple_repeat Simple_repeat 2 66 0 8 841 813 238 53 111 chr13 33603199 33603542 -86680770 + RMER12 LTR ERVK 937 1367 -481 8 841 482 264 128 53 chr13 33603560 33603748 -86680564 + RMER12 LTR ERVK 1121 1322 0 8 841 263 274 176 68 chr13 33604455 33604631 -86679681 - ORR1E LTR MaLR 0 359 165 8 841 7186 88 11 4 chr13 33607994 33609092 -86675220 - L1_Mus3 LINE L1 -2 6636 5531 8 841 225 0 0 0 chr13 33610673 33610698 -86673614 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 841 1606 32 0 0 chr13 33610732 33610917 -86673395 - B2_Mm1t SINE B2 -8 185 1 8 841 216 60 19 57 chr13 33613141 33613194 -86671118 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 8 841 790 64 18 9 chr13 33613194 33613305 -86671007 - B1_Mus1 SINE Alu 0 148 37 9 841 366 283 0 21 chr13 33613240 33613334 -86670978 - MT2B LTR ERVL -344 257 166 9 841 255 346 50 0 chr13 33614249 33614350 -86669962 - ORR1E LTR MaLR -235 124 19 9 841 1230 257 98 19 chr13 33614458 33614827 -86669485 + MTD LTR MaLR 22 419 0 9 841 6691 96 21 52 chr13 33615475 33616485 -86667827 - RLTR13A3 LTR ERVK 0 978 1 9 841 1250 117 10 21 chr13 33616812 33617004 -86667308 - B2_Mm2 SINE B2 -3 192 3 9 841 947 187 144 4 chr13 33618399 33618635 -86665677 + Lx9 LINE L1 7375 7643 -1 9 841 21 36 0 0 chr13 33618637 33618665 -86665647 + AT_rich Low_complexity Low_complexity 1 28 0 9 841 389 289 0 22 chr13 33619621 33619713 -86664599 + B3A SINE B2 1 90 -108 9 841 1056 205 97 86 chr13 33619713 33619991 -86664321 + ORR1C1 LTR MaLR 1 281 -97 9 841 2251 204 21 23 chr13 33619988 33620459 -86663853 - RLTR11A LTR ERVK -49 479 10 1 841 396 300 9 48 chr13 33620497 33620631 -86663681 + B3A SINE B2 85 212 -4 9 841 203 203 17 0 chr13 33620896 33620955 -86663357 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 841 471 278 41 19 chr13 33621040 33621196 -86663116 + B3A SINE B2 19 181 -14 1 841 3071 44 11 3 chr13 33621200 33621563 -86662749 - L1Md_F2 LINE L1 0 6582 6217 1 841 2010 41 16 36 chr13 33621577 33621852 -86662460 - L1Md_F3 LINE L1 0 6584 6338 1 841 317 75 0 0 chr13 33621852 33621892 -86662420 + L1Md_F3 LINE L1 6303 6342 -240 1 841 450 0 0 0 chr13 33622354 33622404 -86661908 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 841 378 262 63 57 chr13 33622435 33622593 -86661719 - RLTR14 LTR ERV1 0 382 224 1 841 281 232 283 0 chr13 33622833 33622932 -86661380 + RLTR22_Mus LTR ERVK 128 254 -1554 1 841 23 0 0 0 chr13 33623461 33623484 -86660828 + AT_rich Low_complexity Low_complexity 1 23 0 1 841 29 28 0 0 chr13 33625328 33625364 -86658948 + AT_rich Low_complexity Low_complexity 1 36 0 1 841 38800 44 1 3 chr13 33625878 33632188 -86652124 - L1Md_T LINE L1 -1 6584 192 1 841 269 319 29 135 chr13 33632372 33632579 -86651733 - ORR1E LTR MaLR 0 359 175 1 841 1160 251 121 14 chr13 33632836 33633199 -86651113 + MTD LTR MaLR 18 419 0 1 841 207 0 0 0 chr13 33633853 33633876 -86650436 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 841 590 0 14 0 chr13 33633876 33633945 -86650367 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 841 1278 97 6 0 chr13 33635303 33635478 -86648834 - Lx3_Mus LINE L1 -435 6574 6399 1 841 3275 102 16 16 chr13 33635488 33635936 -86648376 + Lx3_Mus LINE L1 6562 7009 0 1 841 7452 67 2 0 chr13 33635987 33636931 -86647381 + L1Md_F2 LINE L1 4640 5585 -298 1 841 8843 36 3 1 chr13 33636932 33637923 -86646389 + L1Md_F2 LINE L1 5587 6579 -3 1 841 1443 241 109 5 chr13 33638466 33638841 -86645471 + MTD LTR MaLR 6 419 0 1 841 8174 51 2 1 chr13 33638996 33640235 -86644077 - L1Md_F2 LINE L1 -12 6570 5332 1 841 11377 81 1 1 chr13 33640230 33642378 -86641934 + L1_Mm LINE L1 2017 5413 -470 1 841 579 271 62 7 chr13 33643678 33643823 -86640489 + RSINE1 SINE B4 11 163 -2 1 841 463 336 44 18 chr13 33644215 33644442 -86639870 + RMER5 LTR ERV1 302 534 0 1 841 1262 179 12 4 chr13 33645108 33645361 -86638951 + L1_Mur2 LINE L1 5121 5375 -502 1 841 4960 117 30 1 chr13 33645361 33646062 -86638250 + L1_Mus4 LINE L1 5915 6635 -1 1 841 514 338 86 53 chr13 33646464 33646861 -86637451 + MuRRS-int LTR ERV1 1059 1707 -6071 1 841 322 358 43 56 chr13 33647195 33647663 -86636649 + MuRRS-int LTR ERV1 1774 2235 -2455 1 841 787 328 50 31 chr13 33647865 33648491 -86635821 + MuRRS-int LTR ERV1 2548 3098 -1592 1 841 3123 190 63 14 chr13 33648862 33649576 -86634736 - RLTR22_Mur LTR ERVK -1099 749 1 1 841 523 270 112 11 chr13 33650228 33650415 -86633897 - RLTR16 LTR ERVK -299 206 1 1 841 1566 207 10 7 chr13 33650416 33650722 -86633590 + ORR1A4 LTR MaLR 23 329 0 1 841 338 342 9 0 chr13 33650794 33650908 -86633404 + MuRRS-int LTR ERV1 4160 4274 -3282 1 841 468 262 0 12 chr13 33650909 33651018 -86633294 + B3A SINE B2 5 110 -85 1 841 302 223 178 86 chr13 33651987 33652139 -86632173 - MMVL30-int LTR ERV1 0 7778 7613 1 841 3973 258 57 39 chr13 33652125 33653977 -86630335 - MMVL30-int LTR ERV1 -2386 5392 2875 1 841 5370 104 52 9 chr13 33653982 33654490 -86629822 - RMER17D LTR ERVK -2 887 345 1 841 6774 99 16 3 chr13 33654490 33654659 -86629653 - RLTR13D6 LTR ERVK 0 902 734 1 841 306 0 0 0 chr13 33654659 33654693 -86629619 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1 841 6774 99 16 3 chr13 33654693 33655414 -86628898 - RLTR13D6 LTR ERVK -169 733 2 1 841 5370 104 52 9 chr13 33655414 33655756 -86628556 - RMER17D LTR ERVK -545 344 2 1 841 8116 108 32 22 chr13 33655756 33657007 -86627305 - RMER17A-int LTR ERVK 0 1728 465 1 841 449 186 14 92 chr13 33657076 33657218 -86627094 - RMER17A-int LTR ERVK -1433 295 165 1 841 378 0 0 0 chr13 33657248 33657290 -86627022 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 841 942 168 6 18 chr13 33657292 33657462 -86626850 - RMER17A-int LTR ERVK -1558 170 3 1 841 5077 106 12 66 chr13 33657467 33658377 -86625935 - RMER17D LTR ERVK -2 887 27 1 841 1480 169 17 132 chr13 33658378 33658735 -86625577 - MMVL30-int LTR ERV1 -1620 2078 1779 1 841 743 162 0 81 chr13 33658735 33658896 -86625416 - MMVL30-int LTR ERV1 -2035 1663 1516 1 841 284 140 0 0 chr13 33658988 33659045 -86625267 - MMVL30-int LTR ERV1 -2187 1511 1455 1 841 257 206 16 16 chr13 33659194 33659258 -86625054 - MMVL30-int LTR ERV1 -2245 1054 991 1 841 266 174 22 0 chr13 33659453 33659499 -86624813 - MMVL30-int LTR ERV1 -2303 1395 1349 1 841 275 223 60 0 chr13 33659549 33659620 -86624692 - MMVL30-int LTR ERV1 -6316 1462 1406 1 841 767 209 25 85 chr13 33659818 33660017 -86624295 - MMVL30-int LTR ERV1 -2354 1344 1158 1 841 242 254 70 35 chr13 33661084 33661198 -86623114 - MURVY-LTR LTR ERV1 -53 466 349 1 841 696 136 85 0 chr13 33662295 33662413 -86621899 - B1_Mur4 SINE Alu -12 138 11 1 841 1757 212 81 49 chr13 33662757 33663189 -86621123 + RLTR41 LTR ERV1 1 446 0 1 841 659 243 7 21 chr13 33663817 33663960 -86620352 - B1_Mus1 SINE Alu -7 141 1 1 841 882 163 4 17 chr13 33664508 33664745 -86619567 + GA-rich Low_complexity Low_complexity 1 233 0 1 841 2834 169 33 25 chr13 33664768 33665769 -86618543 - RMER17A2 LTR ERVK 0 906 1 1 841 359 269 35 78 chr13 33665800 33665941 -86618371 - RLTR8 LTR ERVK 0 375 241 1 841 1319 336 96 55 chr13 33666941 33668629 -86615683 - SRV_MM-int LTR ERVK -4374 3843 1695 1 841 1020 95 73 0 chr13 33670108 33670245 -86614067 + B1_Mm SINE Alu 1 147 0 1 841 33883 84 5 7 chr13 33670542 33675925 -86608387 + L1Md_F3 LINE L1 233 5586 -297 1 841 8852 34 4 2 chr13 33675926 33676920 -86607392 + L1Md_F3 LINE L1 5588 6583 -1 1 841 225 0 0 0 chr13 33677665 33677690 -86606622 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1 841 456 190 39 20 chr13 33678455 33678557 -86605755 - ORR1D2 LTR MaLR -4 366 263 1 841 330 221 0 0 chr13 33678695 33678790 -86605522 + (CA)n Simple_repeat Simple_repeat 2 96 0 1 841 275 198 126 26 chr13 33678790 33678923 -86605389 - RMER12 LTR ERVK -466 856 746 1 841 1829 156 18 43 chr13 33678916 33679448 -86604864 - ORR1A2 LTR MaLR -49 345 1 1 841 39745 65 40 9 chr13 33679448 33684113 -86600199 - MERVL-int LTR ERVL -209 5276 489 1 841 4563 21 0 0 chr13 33684113 33684595 -86599717 + LTRIS_Mm LTR ERV1 1 482 0 1 841 39745 65 40 9 chr13 33684595 33685045 -86599267 - MERVL-int LTR ERVL -4997 488 1 1 105 4097 65 0 0 chr13 33685045 33685520 -86598792 - MT2C_Mm LTR ERVL 0 475 1 1 842 3592 207 76 59 chr13 33685520 33686404 -86597908 + RMER13B LTR ERVK 6 904 -4 1 842 1309 252 20 28 chr13 33686407 33686807 -86597505 - ORR1A2-int LTR MaLR -977 815 419 1 842 1144 221 29 53 chr13 33686812 33686893 -86597419 - RLTR21 LTR ERVK -511 1061 982 1 842 402 21 0 0 chr13 33686893 33686940 -86597372 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1 842 1182 95 0 0 chr13 33686941 33687088 -86597224 - B1_Mus1 SINE Alu 0 148 2 1 842 1144 221 29 53 chr13 33687088 33687344 -86596968 - RLTR21 LTR ERVK -591 981 730 1 842 2500 217 94 94 chr13 33688822 33689564 -86594748 - RLTR21 LTR ERVK -830 742 1 1 842 241 295 22 33 chr13 33689647 33689738 -86594574 - RLTR14 LTR ERV1 -11 371 282 1 842 3550 197 19 50 chr13 33689746 33690601 -86593711 - RMER13B LTR ERVK 0 908 1 1 842 258 300 0 0 chr13 33690620 33690670 -86593642 - ID4_ SINE ID -30 53 4 1 842 1368 85 45 0 chr13 33690914 33691090 -86593222 - B2_Mm2 SINE B2 -10 185 2 1 842 324 0 0 0 chr13 33692384 33692420 -86591892 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 842 270 0 0 0 chr13 33692420 33692450 -86591862 + (CCA)n Simple_repeat Simple_repeat 3 32 0 1 842 261 286 52 0 chr13 33693093 33693170 -86591142 + MER72B LTR ERV1 418 498 -270 1 842 435 318 114 102 chr13 33694015 33694418 -86589894 - MLT1A1 LTR MaLR 0 408 1 1 842 3793 161 39 3 chr13 33694743 33695439 -86588873 + Lx3C LINE L1 3744 4464 -1422 1 842 33040 78 1 0 chr13 33695436 33700710 -86583602 + L1Md_F2 LINE L1 307 5586 -297 1 842 8392 52 5 23 chr13 33700710 33701736 -86582576 + L1Md_F2 LINE L1 5587 6582 0 1 842 26718 105 6 10 chr13 33701736 33706391 -86577921 - L1Md_A LINE L1 -1007 4876 238 1 842 7470 126 7 77 chr13 33706399 33706782 -86577530 + Lx3C LINE L1 4644 5028 -858 1 842 998 88 80 7 chr13 33706782 33706919 -86577393 + B1_Mm SINE Alu 1 147 0 1 842 7470 126 7 77 chr13 33706919 33706952 -86577360 + Lx3C LINE L1 5029 5029 -857 1 842 1076 104 0 4 chr13 33706952 33707203 -86577109 + (GAA)n Simple_repeat Simple_repeat 1 249 0 1 842 7470 166 36 36 chr13 33707203 33709088 -86575224 + Lx3C LINE L1 5029 6971 -29 1 842 299 25 0 24 chr13 33709088 33709129 -86575183 + (TAA)n Simple_repeat Simple_repeat 2 41 0 1 842 180 0 0 0 chr13 33709132 33709152 -86575160 + (GGAGAA)n Simple_repeat Simple_repeat 3 22 0 1 842 280 122 0 0 chr13 33709153 33709194 -86575118 + (GAA)n Simple_repeat Simple_repeat 3 43 0 1 842 792 153 0 0 chr13 33709194 33709331 -86574981 + GA-rich Low_complexity Low_complexity 3 139 0 1 842 1616 279 33 14 chr13 33709613 33710101 -86574211 - RLTR11A2 LTR ERVK -24 503 7 1 842 272 229 8 135 chr13 33710112 33710238 -86574074 - MYSERV-int LTR ERVK 0 6550 6441 1 842 259 281 0 17 chr13 33710268 33710326 -86573986 - B1_Mur3 SINE Alu -50 99 43 1 842 1443 254 72 30 chr13 33710977 33711452 -86572860 - RLTR11A2 LTR ERVK -28 499 5 1 842 406 219 14 0 chr13 33711950 33712023 -86572289 - ID4_ SINE ID -6 77 4 1 842 230 310 62 117 chr13 33712035 33712163 -86572149 - PB1 SINE Alu -2 125 5 1 842 252 362 11 11 chr13 33714081 33714171 -86570141 + ID_B1 SINE B4 2 91 -133 1 842 502 272 30 163 chr13 33714171 33714373 -86569939 + MTD LTR MaLR 4 186 -233 1 842 991 252 95 13 chr13 33715387 33715704 -86568608 - Lx9 LINE L1 -28 7616 7274 1 842 24 0 0 0 chr13 33715704 33715728 -86568584 + AT_rich Low_complexity Low_complexity 1 24 0 1 842 378 293 12 0 chr13 33715777 33715859 -86568453 - RSINE1 SINE B4 -35 130 48 1 842 240 227 0 0 chr13 33715873 33715917 -86568395 - ORR1D1 LTR MaLR -315 59 16 1 842 537 264 61 24 chr13 33716021 33716224 -86568088 + ORR1C1 LTR MaLR 19 228 -166 1 842 35451 48 5 3 chr13 33716229 33721327 -86562985 + L1Md_T LINE L1 380 5584 -302 1 842 8898 37 1 0 chr13 33721333 33722327 -86561985 + L1Md_T LINE L1 5591 6585 0 1 842 560 117 11 0 chr13 33722327 33722414 -86561898 - RMER19C LTR ERVK -522 89 2 1 842 357 24 0 0 chr13 33722717 33722759 -86561553 + (T)n Simple_repeat Simple_repeat 1 42 0 1 842 1137 82 0 40 chr13 33722759 33722911 -86561401 - B1_Mus2 SINE Alu 0 147 2 1 842 812 219 173 77 chr13 33723026 33723362 -86560950 - RLTR9A LTR ERVK 0 368 1 1 842 647 327 46 36 chr13 33724681 33725093 -86559219 + RLTR4_MM-int LTR ERV1 2638 3053 -4548 1 842 3165 81 8 2 chr13 33725093 33725491 -86558821 - MTB LTR MaLR 0 400 1 1 842 6666 138 23 35 chr13 33725491 33726600 -86557712 - MTB-int LTR MaLR 0 1098 3 1 842 3216 70 5 20 chr13 33726602 33727008 -86557304 - MTB LTR MaLR 0 400 1 1 842 366 129 0 0 chr13 33727302 33727364 -86556948 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 842 1252 214 92 3 chr13 33727469 33727774 -86556538 + Lx9 LINE L1 7311 7642 -2 1 842 1666 152 11 7 chr13 33729232 33729517 -86554795 - L1_Mur2 LINE L1 -3086 2791 2506 1 842 1153 163 14 101 chr13 33729486 33729773 -86554539 - L1_Mur2 LINE L1 -3990 1887 1626 1 842 414 0 0 0 chr13 33730406 33730452 -86553860 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 842 687 46 0 0 chr13 33730452 33730538 -86553774 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 842 2299 74 0 0 chr13 33730629 33730914 -86553398 - L1_Mm LINE L1 -234 5649 5365 1 842 562 238 55 8 chr13 33731300 33731427 -86552885 - ETnERV2-int LTR ERVK -204 7202 7070 1 842 3624 65 2 0 chr13 33731428 33731886 -86552426 - L1_Mm LINE L1 -511 5372 4914 1 842 7820 56 0 1 chr13 33731886 33732801 -86551511 + L1Md_F2 LINE L1 5666 6579 -3 2 842 357 43 0 0 chr13 33732963 33733010 -86551302 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 842 445 269 90 23 chr13 33733016 33733149 -86551163 - B1_Mur3 SINE Alu -7 142 1 2 842 360 192 0 14 chr13 33733264 33733338 -86550974 - B1_Mur1 SINE Alu -2 147 75 2 842 329 289 41 136 chr13 33734075 33734200 -86550112 - MLT1B LTR MaLR -1 389 279 2 842 342 0 0 0 chr13 33734200 33734238 -86550074 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 2 842 329 271 291 83 chr13 33734238 33734458 -86549854 - MLT1B LTR MaLR -112 278 10 2 842 268 325 146 53 chr13 33734451 33734773 -86549539 - MLT1B-int LTR MaLR -289 1120 769 2 842 4665 152 44 7 chr13 33736028 33736977 -86547335 + Lx LINE L1 5043 6040 -614 2 842 2506 175 88 22 chr13 33736977 33737475 -86546837 - RMER16 LTR ERVK -2 531 1 2 842 3898 142 71 13 chr13 33737475 33737727 -86546585 + Lx LINE L1 6041 6297 -357 2 842 1227 159 0 0 chr13 33737734 33737935 -86546377 + Lx2 LINE L1 6797 6997 0 2 842 408 337 48 12 chr13 33738697 33738862 -86545450 - MTD LTR MaLR -213 206 36 2 842 284 267 111 48 chr13 33740880 33740923 -86543389 + ID_B1 SINE B4 91 197 -27 2 842 298 222 27 27 chr13 33740923 33740997 -86543315 + B1F SINE Alu 67 140 -9 2 842 380 240 13 0 chr13 33741006 33741081 -86543231 + ID4_ SINE ID 2 77 -6 2 842 350 336 34 54 chr13 33741118 33741266 -86543046 + RSINE1 SINE B4 21 165 0 2 842 509 205 8 18 chr13 33741473 33741592 -86542720 - PB1D9 SINE Alu -1 119 4 2 842 275 312 20 40 chr13 33741509 33741609 -86542703 - B4A SINE B4 -123 169 72 2 842 1471 281 59 30 chr13 33742001 33742496 -86541816 + RLTR11A2 LTR ERVK 1 509 -18 2 842 3621 133 19 0 chr13 33743177 33743827 -86540485 - Lx4A LINE L1 -1098 5960 5292 2 842 4121 206 14 8 chr13 33743829 33744607 -86539705 + Lx4A LINE L1 6274 7056 -2 2 842 21 36 0 0 chr13 33744607 33744635 -86539677 + AT_rich Low_complexity Low_complexity 1 28 0 2 842 226 254 0 137 chr13 33744648 33744721 -86539591 + 4.5SRNA scRNA scRNA 24 86 -8 2 842 485 220 10 10 chr13 33744671 33744772 -86539540 + B1_Mur3 SINE Alu 43 143 -6 2 842 1508 280 60 54 chr13 33744982 33745867 -86538445 + MYSERV6-int LTR ERVK 5 768 -1558 2 842 304 312 49 49 chr13 33745868 33746030 -86538282 + RMER4A LTR ERVK 261 422 -44 2 842 1221 212 91 112 chr13 33746036 33746599 -86537713 + MYSERV6-int LTR ERVK 7813 8291 -668 2 842 301 226 51 143 chr13 33746618 33746633 -86537679 + L1_Mus3 LINE L1 6376 6388 -179 2 842 1160 149 23 0 chr13 33746633 33746808 -86537504 + B2_Mm1t SINE B2 2 180 -13 2 842 655 168 22 58 chr13 33746808 33746972 -86537340 + L1_Mus3 LINE L1 6389 6605 -33 2 842 211 28 27 27 chr13 33746972 33747009 -86537303 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 2 842 655 151 14 35 chr13 33747009 33747024 -86537288 + L1_Mus3 LINE L1 6606 6618 -20 2 842 345 47 0 0 chr13 33747024 33747067 -86537245 + (GAA)n Simple_repeat Simple_repeat 3 45 0 2 842 1620 40 0 3 chr13 33747067 33747371 -86536941 + (GGAGAA)n Simple_repeat Simple_repeat 1 302 0 2 842 1551 230 93 28 chr13 33747377 33747903 -86536409 + MYSERV6-int LTR ERVK 8328 8783 -176 2 842 452 244 52 97 chr13 33747885 33748134 -86536178 + MYSERV6-int LTR ERVK 6312 6541 -9 2 842 784 278 119 26 chr13 33748155 33748465 -86535847 + RLTR11A2 LTR ERVK 19 357 -170 2 842 308 262 56 9 chr13 33748489 33748597 -86535715 + RLTR11A2 LTR ERVK 401 513 -14 2 842 290 318 18 27 chr13 33749171 33749281 -86535031 + MLT1A1 LTR MaLR 300 408 0 2 842 3036 47 3 0 chr13 33750411 33750755 -86533557 - IAPLTR4 LTR ERVK 0 345 1 2 842 259 313 0 0 chr13 33751317 33751384 -86532928 + ID4_ SINE ID 4 70 -13 2 842 315 0 0 0 chr13 33751528 33751563 -86532749 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 842 336 83 0 0 chr13 33754117 33754165 -86530147 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 2 842 797 157 57 0 chr13 33754175 33754315 -86529997 - B1_Mur3 SINE Alu 0 149 2 2 842 566 321 133 65 chr13 33754685 33755038 -86529274 + MTE2a LTR MaLR 3 379 0 2 842 891 28 0 0 chr13 33755149 33755255 -86529057 + (GGAA)n Simple_repeat Simple_repeat 2 107 0 2 842 378 0 0 0 chr13 33755600 33755642 -86528670 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 842 501 97 0 0 chr13 33755650 33755722 -86528590 - B1_Mur1 SINE Alu -1 148 77 2 842 510 17 0 0 chr13 33755754 33755813 -86528499 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 842 274 255 44 70 chr13 33756543 33756622 -86527690 - MLT1B LTR MaLR -12 378 303 2 842 430 255 11 106 chr13 33756622 33756802 -86527510 - RNLTR23 LTR ERVK 0 642 480 2 842 470 323 44 26 chr13 33757034 33757260 -86527052 - MLT1B LTR MaLR -151 239 10 2 842 343 341 103 39 chr13 33757253 33757583 -86526729 - MLT1B-int LTR MaLR -289 1120 770 2 842 231 333 24 24 chr13 33759612 33759695 -86524617 - ID2 SINE ID 0 83 1 2 842 229 276 25 38 chr13 33759810 33759889 -86524423 - B4A SINE B4 -205 87 10 2 842 701 227 43 0 chr13 33759907 33760048 -86524264 - B1_Mm SINE Alu 0 147 1 2 842 426 192 13 0 chr13 33760270 33760348 -86523964 - B1_Mur4 SINE Alu -5 145 67 2 842 1624 216 69 19 chr13 33760520 33760884 -86523428 - ORR1C2 LTR MaLR -2 382 1 2 842 403 107 58 23 chr13 33762019 33762105 -86522207 + MusHAL1 LINE L1 355 443 -2269 2 842 1431 123 9 0 chr13 33762103 33762323 -86521989 + L1_Mm LINE L1 2161 2382 -3501 2 842 293 203 31 0 chr13 33762767 33762831 -86521481 - ID4_ SINE ID -16 67 2 2 842 345 304 65 56 chr13 33764108 33764324 -86519988 + RLTR14 LTR ERV1 165 382 0 2 842 2172 228 54 73 chr13 33764391 33764979 -86519333 + RLTR21 LTR ERVK 1 577 -995 2 842 16139 156 23 9 chr13 33765028 33769181 -86515131 - Lx2A1 LINE L1 -6 7002 2786 2 842 38475 47 2 3 chr13 33769224 33775625 -86508687 - L1Md_T LINE L1 0 6585 92 2 842 911 207 0 0 chr13 33775624 33775803 -86508509 - MusHAL1 LINE L1 -1111 1601 1423 2 842 11134 67 7 7 chr13 33775814 33777948 -86506364 - L1Md_F2 LINE L1 -2 6580 4449 2 842 2519 151 38 56 chr13 33777927 33778459 -86505853 - MusHAL1 LINE L1 -1282 1430 909 2 842 3558 112 18 4 chr13 33778459 33778968 -86505344 + L1_Mus4 LINE L1 6117 6632 -4 2 842 440 372 90 12 chr13 33779059 33779391 -86504921 - MLT1H-int LTR MaLR -289 1120 763 2 842 213 65 0 0 chr13 33781125 33781156 -86503156 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 2 842 358 256 181 71 chr13 33781379 33781589 -86502723 - RLTR21 LTR ERVK 0 1572 1340 2 842 20862 157 46 6 chr13 33781589 33786423 -86497889 - L1_Mus3 LINE L1 -8 6630 1593 2 842 5189 147 57 7 chr13 33786423 33787330 -86496982 + RMER17B LTR ERVK 1 953 -5 2 842 3363 119 16 10 chr13 33787335 33787815 -86496497 - L1VL4 LINE L1 -2316 1243 768 2 842 485 32 16 0 chr13 33787815 33787878 -86496434 + (TTTC)n Simple_repeat Simple_repeat 1 64 0 2 842 513 0 0 0 chr13 33787884 33787941 -86496371 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 2 842 1231 58 0 0 chr13 33787941 33788079 -86496233 - B1_Mus1 SINE Alu -10 138 1 2 842 3363 169 32 54 chr13 33788079 33788527 -86495785 - L1VL4 LINE L1 -5535 767 319 2 842 1034 302 84 54 chr13 33788536 33789093 -86495219 - RLTR22_Mur LTR ERVK -1274 574 1 2 842 2373 116 17 0 chr13 33789262 33789623 -86494689 - L1_Mm LINE L1 -2167 3716 3350 2 842 4147 104 0 3 chr13 33789625 33790232 -86494080 + MusHAL1 LINE L1 1561 2165 -547 2 842 686 264 14 0 chr13 33790364 33790504 -86493808 - B1_Mur2 SINE Alu -7 142 1 2 842 1272 53 9 21 chr13 33790900 33791077 -86493235 - ORR1A0 LTR MaLR 0 379 192 2 842 3082 137 123 2 chr13 33791077 33791596 -86492716 + ETnERV2-int LTR ERVK 3690 4271 -3135 2 842 502 196 10 35 chr13 33791600 33791729 -86492583 + MMETn-int LTR ERVK 2356 2463 -2381 2 842 790 110 35 49 chr13 33791737 33791880 -86492432 + MMERVK10C-int LTR ERVK 4530 4670 -2911 2 842 3325 21 70 0 chr13 33792505 33792889 -86491423 + IAPLTR2a LTR ERVK 1 411 0 2 842 23211 66 9 26 chr13 33792966 33795978 -86488334 + MMERVK10C-int LTR ERVK 4623 7581 0 2 842 2354 74 164 3 chr13 33795978 33796290 -86488022 + RLTR10B2 LTR ERVK 1 362 -3 2 842 292 302 71 121 chr13 33796312 33796692 -86487620 - RLTR40 LTR ERVK -334 483 123 2 842 477 223 19 10 chr13 33798384 33798488 -86485824 + B1_Mur4 SINE Alu 44 148 -2 2 842 1537 287 61 63 chr13 33798705 33799572 -86484740 + MYSERV16_I-int LTR ERVK 2 866 -1460 2 842 264 327 55 19 chr13 33799572 33799757 -86484555 + RMER4B LTR ERVK 250 525 -60 2 842 1430 217 98 39 chr13 33799808 33800314 -86483998 + MYSERV16_I-int LTR ERVK 5387 5883 -667 2 842 258 143 24 0 chr13 33800334 33800376 -86483936 + L1_Mur1 LINE L1 5497 5539 -347 2 842 456 51 0 0 chr13 33800381 33800440 -86483872 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 2 842 793 19 38 0 chr13 33800440 33800545 -86483767 + (GGGAA)n Simple_repeat Simple_repeat 3 111 0 2 842 471 63 0 0 chr13 33800545 33800608 -86483704 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 842 1599 252 43 18 chr13 33800611 33801055 -86483257 + MYSERV6-int LTR ERVK 8328 8782 -177 2 842 2604 101 6 0 chr13 33801095 33801451 -86482861 - Lx3_Mus LINE L1 -448 6561 6204 2 842 3390 93 9 0 chr13 33801452 33801893 -86482419 + Lx3_Mus LINE L1 6565 7009 0 2 842 509 244 6 86 chr13 33802018 33802193 -86482119 + MYSERV16_I-int LTR ERVK 6389 6549 -1 2 842 725 271 76 51 chr13 33802204 33802525 -86481787 + RLTR11A2 LTR ERVK 14 357 -170 2 842 257 343 18 9 chr13 33803374 33803483 -86480829 + MLT1A1 LTR MaLR 299 408 0 2 842 2989 58 3 0 chr13 33804663 33805008 -86479304 - ORR1A1 LTR MaLR 0 346 1 2 842 248 359 0 0 chr13 33805502 33805566 -86478746 + tRNA-Ala-GCA tRNA tRNA 1 64 -11 2 842 204 111 0 0 chr13 33805719 33805755 -86478557 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 842 234 105 0 0 chr13 33805810 33805848 -86478464 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 842 219 139 0 0 chr13 33806756 33806792 -86477520 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 842 210 37 0 0 chr13 33807059 33807086 -86477226 + (TTTCC)n Simple_repeat Simple_repeat 3 29 0 2 842 366 91 0 0 chr13 33808377 33808432 -86475880 + (TTGG)n Simple_repeat Simple_repeat 1 55 0 2 842 748 221 7 33 chr13 33808438 33808588 -86475724 - B1_Mus2 SINE Alu 0 147 2 2 842 246 284 40 0 chr13 33808978 33809052 -86475260 + MTE2a LTR MaLR 2 78 -301 2 842 526 236 100 19 chr13 33809140 33809334 -86474978 + MTE2a LTR MaLR 111 379 0 2 842 264 254 0 0 chr13 33809394 33809512 -86474800 + GA-rich Low_complexity Low_complexity 2 119 0 2 842 528 77 0 0 chr13 33809831 33809909 -86474403 + (TG)n Simple_repeat Simple_repeat 1 78 0 2 842 490 99 0 14 chr13 33809919 33809991 -86474321 - B1_Mur1 SINE Alu -2 147 77 2 842 276 250 51 26 chr13 33810520 33810598 -86473714 - MLT1G3-int LTR MaLR -553 856 777 2 842 227 311 211 40 chr13 33810688 33810939 -86473373 - MLT1G3 LTR MaLR -193 402 109 2 842 617 262 50 0 chr13 33812638 33812779 -86471533 - B1_Mur2 SINE Alu 0 149 2 2 842 420 231 22 0 chr13 33812994 33813085 -86471227 - B1_Mus2 SINE Alu 0 147 55 2 842 1100 248 84 25 chr13 33813249 33813571 -86470741 - ORR1C2 LTR MaLR -20 364 24 3 105 26612 26 11 0 chr13 33814297 33818068 -86466244 - L1Md_A LINE L1 0 6582 2766 3 843 1258 129 13 4 chr13 33818064 33818289 -86466023 - L1Md_A LINE L1 -6058 666 440 3 843 5627 57 30 3 chr13 33818289 33819027 -86465285 - RLTR13D6 LTR ERVK -144 758 1 3 843 952 147 6 0 chr13 33819028 33819198 -86465114 + Lx2A1 LINE L1 6832 7002 -6 3 843 1747 243 112 63 chr13 33819270 33819430 -86464882 - RLTR21 LTR ERVK -1007 565 412 3 843 315 0 0 0 chr13 33819430 33819465 -86464847 + (CAA)n Simple_repeat Simple_repeat 2 36 0 3 843 1747 243 112 63 chr13 33819465 33819840 -86464472 - RLTR21 LTR ERVK -1161 411 5 3 843 381 329 25 31 chr13 33819925 33820085 -86464227 - RLTR14 LTR ERV1 0 382 224 3 843 293 203 31 0 chr13 33821435 33821499 -86462813 + ID4_ SINE ID 2 67 -16 3 843 7902 58 8 14 chr13 33821726 33822725 -86461587 - L1Md_F2 LINE L1 -2 6580 5588 3 843 1433 75 5 0 chr13 33822743 33822929 -86461383 + L1_Mm LINE L1 5073 5259 -624 3 843 19358 94 1 32 chr13 33822931 33826569 -86457743 - L1Md_F LINE L1 -2085 3798 278 3 843 984 270 77 81 chr13 33827405 33827861 -86456451 - RMER13A LTR ERVK -406 454 1 3 843 1126 117 44 0 chr13 33828090 33828270 -86456042 + B2_Mm2 SINE B2 7 194 -1 3 843 19228 90 1 6 chr13 33828308 33831896 -86452416 + L1Md_F LINE L1 273 3798 -2085 3 843 1433 75 5 0 chr13 33831898 33832084 -86452228 - L1_Mm LINE L1 -624 5259 5073 3 843 8201 58 9 14 chr13 33832102 33833098 -86451214 + L1Md_F2 LINE L1 5588 6578 -4 3 843 271 203 31 0 chr13 33833327 33833391 -86450921 - ID4_ SINE ID -16 67 2 3 843 406 323 25 31 chr13 33834741 33834901 -86449411 + RLTR14 LTR ERV1 224 382 0 3 843 1746 246 111 64 chr13 33834986 33835359 -86448953 + RLTR21 LTR ERVK 7 410 -1162 3 843 288 0 0 0 chr13 33835359 33835391 -86448921 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 843 1746 246 111 64 chr13 33835391 33835551 -86448761 + RLTR21 LTR ERVK 411 564 -1008 3 843 887 144 6 0 chr13 33835624 33835791 -86448521 - Lx2A1 LINE L1 -9 6999 6832 3 843 5679 56 30 1 chr13 33835792 33836529 -86447783 + RLTR13D6 LTR ERVK 1 758 -144 3 843 1182 129 13 4 chr13 33836529 33836754 -86447558 + L1Md_A LINE L1 440 666 -6058 3 843 22795 21 0 0 chr13 33836750 33839542 -86444770 + L1_Mm LINE L1 2766 5558 -325 3 843 273 294 45 106 chr13 33839542 33839570 -86444742 + RLTR13D6 LTR ERVK 791 815 -143 3 843 8428 33 1 0 chr13 33839570 33840565 -86443747 + L1Md_T LINE L1 5587 6582 0 3 843 718 206 27 27 chr13 33840565 33840715 -86443597 + RLTR13C2 LTR ERVK 659 808 0 3 843 7408 137 18 15 chr13 33840715 33842067 -86442245 - Lx2A1 LINE L1 -172 6836 5486 3 843 7824 172 257 3 chr13 33842060 33844563 -86439749 - Lx2A1 LINE L1 -1721 4165 987 3 843 687 215 15 0 chr13 33844563 33844693 -86439619 + ETnERV2-int LTR ERVK 7071 7202 -204 3 843 315 274 43 31 chr13 33845240 33845402 -86438910 + RMER16-int LTR ERVK 169 332 -6912 3 843 5883 68 1 0 chr13 33845416 33846219 -86438093 - L1_Mm LINE L1 -508 5375 4572 3 843 504 260 46 23 chr13 33846219 33846349 -86437963 + ETnERV2-int LTR ERVK 7070 7202 -204 3 843 1272 218 107 31 chr13 33847238 33847685 -86436627 + RMER16-int LTR ERVK 241 623 -4783 3 843 434 178 93 0 chr13 33847731 33847849 -86436463 + RLTR45-int LTR ERVK 1721 1849 -5557 3 843 297 267 0 55 chr13 33847860 33847951 -86436361 + RLTR45-int LTR ERVK 2454 2539 -4867 3 843 4740 191 60 89 chr13 33847979 33849807 -86434505 + RLTR45-int LTR ERVK 3583 5907 -1337 3 843 852 280 15 7 chr13 33849796 33850151 -86434161 + RLTR45-int LTR ERVK 7506 7828 -389 3 843 3638 190 29 10 chr13 33850181 33850876 -86433436 + ETnERV2-int LTR ERVK 6495 7202 -204 3 843 6652 43 14 1 chr13 33851270 33852154 -86432158 - L1_Mm LINE L1 -1305 4578 3684 3 843 1211 64 0 0 chr13 33852148 33852305 -86432007 + L1Md_F2 LINE L1 5430 5586 -297 3 843 7923 57 1 2 chr13 33852306 33853296 -86431016 + L1Md_F2 LINE L1 5588 6576 -6 3 843 585 210 5 107 chr13 33853963 33854187 -86430125 - MMETn-int LTR ERVK -2288 2556 2356 3 843 591 121 11 0 chr13 33854191 33854282 -86430030 - ETnERV2-int LTR ERVK -3135 4271 4180 3 843 198 0 0 0 chr13 33854311 33854333 -86429979 + (A)n Simple_repeat Simple_repeat 1 22 0 3 843 7151 77 15 6 chr13 33856148 33857884 -86426428 + L1_Mus1 LINE L1 4809 6566 -1 3 843 599 71 12 0 chr13 33857900 33857985 -86426327 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 3 843 363 296 0 10 chr13 33857985 33858084 -86426228 + B1F2 SINE Alu 41 138 -11 3 843 310 302 23 0 chr13 33858279 33858365 -86425947 + B1F2 SINE Alu 5 92 -57 3 843 24 53 0 0 chr13 33858607 33858645 -86425667 + AT_rich Low_complexity Low_complexity 1 38 0 3 843 432 0 0 0 chr13 33859464 33859512 -86424800 + (TTG)n Simple_repeat Simple_repeat 2 49 0 3 843 22 0 0 0 chr13 33860968 33860990 -86423322 + AT_rich Low_complexity Low_complexity 1 22 0 3 843 405 0 0 0 chr13 33861635 33861680 -86422632 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 843 293 333 28 19 chr13 33861684 33861791 -86422521 - MTEa LTR MaLR -9 370 263 3 843 27279 70 4 1 chr13 33861884 33866390 -86417922 - L1Md_F2 LINE L1 0 6582 2062 3 843 3200 45 25 0 chr13 33866390 33866791 -86417521 - IAPLTR2a LTR ERVK 0 411 1 3 843 6072 64 11 6 chr13 33866793 33867616 -86416696 - IAPEz-int LTR ERVK -2 6479 5653 3 843 2600 58 0 3 chr13 33867611 33867954 -86416358 - IAPEz-int LTR ERVK -4781 1700 1359 3 843 3414 79 17 20 chr13 33867954 33868783 -86415529 - IAPEz-int LTR ERVK -5819 662 9 3 843 3176 48 25 0 chr13 33868785 33869185 -86415127 - IAPLTR2a LTR ERVK -1 410 1 3 843 3658 80 0 2 chr13 33869185 33869749 -86414563 - L1Md_F2 LINE L1 -3816 2067 1505 3 843 35142 30 1 7 chr13 33869751 33874920 -86409392 + L1Md_T LINE L1 459 5586 -297 3 843 8300 42 0 0 chr13 33874920 33875916 -86408396 + L1Md_T LINE L1 5587 6582 0 3 843 4130 156 8 20 chr13 33875960 33877051 -86407261 - L1Md_F2 LINE L1 -4359 1524 450 3 843 4595 217 26 23 chr13 33877069 33878796 -86405516 - Lx5 LINE L1 -322 6728 4986 3 843 1805 201 115 27 chr13 33878814 33879183 -86405129 - Lx5 LINE L1 -1532 4345 3959 3 843 420 20 0 0 chr13 33879183 33879232 -86405080 + (TTA)n Simple_repeat Simple_repeat 3 51 0 3 843 1805 201 115 27 chr13 33879232 33879419 -86404893 - Lx5 LINE L1 -1919 3958 3742 3 843 1968 142 36 6 chr13 33879405 33879767 -86404545 + Lx5 LINE L1 3360 3732 -2145 3 843 2442 289 44 24 chr13 33879779 33880733 -86403579 - Lx6 LINE L1 -722 6738 5766 3 843 257 0 30 0 chr13 33880785 33880818 -86403494 + (TGAG)n Simple_repeat Simple_repeat 2 35 0 3 843 1027 271 7 10 chr13 33881898 33882192 -86402120 - Lx6 LINE L1 -198 5682 5390 3 843 652 282 132 68 chr13 33882190 33882707 -86401605 - Lx7 LINE L1 -20 7676 7127 3 843 11497 33 1 0 chr13 33882711 33884825 -86399487 - L1Md_T LINE L1 0 6582 4468 3 843 3168 286 36 30 chr13 33884813 33886155 -86398157 - Lx7 LINE L1 -549 7147 5805 3 843 1486 277 109 46 chr13 33886541 33888106 -86396206 - Lx5 LINE L1 -3919 1961 293 3 843 282 351 27 0 chr13 33888646 33888794 -86395518 - Lx8 LINE L1 -610 6863 6712 3 843 31847 69 2 4 chr13 33889036 33894361 -86389951 + L1Md_T LINE L1 273 5586 -297 3 843 8021 54 1 0 chr13 33894362 33895356 -86388956 + L1Md_T LINE L1 5588 6582 0 3 843 11505 28 0 0 chr13 33895357 33896775 -86387537 + L1Md_T LINE L1 4169 5586 -297 3 843 8030 54 1 0 chr13 33896775 33897770 -86386542 + L1Md_T LINE L1 5587 6582 0 3 843 10801 55 0 1 chr13 33897771 33899191 -86385121 + L1Md_F2 LINE L1 4169 5586 -297 3 843 7934 55 3 2 chr13 33899191 33900183 -86384129 + L1Md_F2 LINE L1 5587 6579 -3 3 843 459 0 0 0 chr13 33900212 33900263 -86384049 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 3 843 4621 227 46 19 chr13 33900317 33901459 -86382853 - Lx5 LINE L1 -81 6969 5797 3 843 333 0 0 0 chr13 33901704 33901741 -86382571 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 843 716 214 8 0 chr13 33904780 33904911 -86379401 + ETnERV2-int LTR ERVK 7071 7202 -204 3 843 245 252 48 39 chr13 33905189 33905292 -86379020 + RNLTR23 LTR ERVK 539 642 0 3 843 5566 172 16 3 chr13 33905507 33906599 -86377713 + L1_Mur2 LINE L1 4772 5877 0 3 843 1057 155 42 31 chr13 33906601 33906861 -86377451 - Lx2B LINE L1 -845 6155 5893 3 843 6311 113 15 1 chr13 33906861 33908025 -86376287 - Lx3A LINE L1 -381 6600 5416 3 843 438 65 0 0 chr13 33910486 33910548 -86373764 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 843 366 80 0 0 chr13 33910548 33910597 -86373715 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 843 386 330 65 5 chr13 33910796 33911012 -86373300 - RLTR42-int LTR ERVK -4657 865 637 3 843 2154 142 15 4 chr13 33911171 33911520 -86372792 + ORR1A2 LTR MaLR 5 378 0 3 843 4675 177 91 7 chr13 33911520 33912536 -86371776 + ORR1A2-int LTR MaLR 1 1102 -861 3 843 3884 90 5 36 chr13 33912536 33913114 -86371198 + RMER2 LTR ERV1 1 560 -7 3 843 477 301 56 8 chr13 33915643 33915894 -86368418 + MuLV-int LTR ERV1 4030 4292 -3314 3 843 823 315 62 12 chr13 33916323 33916758 -86367554 + MuLV-int LTR ERV1 4848 5239 -2367 3 843 4212 130 19 16 chr13 33917139 33917159 -86367153 + ORR1A3-int LTR MaLR 1083 1097 -866 3 843 3212 115 82 26 chr13 33917159 33917695 -86366617 + RMER2 LTR ERV1 2 567 0 3 843 4212 130 19 16 chr13 33917695 33918361 -86365951 + ORR1A3-int LTR MaLR 1098 1771 -192 3 843 4749 180 48 2 chr13 33918361 33919287 -86365025 + Lx3C LINE L1 5060 6086 -890 3 843 3237 48 2 2 chr13 33919287 33919683 -86364629 - MTA_Mm LTR MaLR 0 396 1 3 843 4749 228 98 2 chr13 33919683 33920538 -86363774 + Lx3C LINE L1 6087 6973 -3 3 843 2867 144 3 105 chr13 33920546 33921191 -86363121 + L1_Mur2 LINE L1 4515 5093 -784 3 843 189 0 0 0 chr13 33921475 33921496 -86362816 + (T)n Simple_repeat Simple_repeat 1 21 0 3 843 1146 35 35 0 chr13 33921496 33921638 -86362674 - B1_Mus2 SINE Alu 0 147 1 3 843 558 212 8 33 chr13 33921917 33922039 -86362273 - ORR1D2 LTR MaLR -6 364 246 3 843 351 0 0 0 chr13 33922150 33922189 -86362123 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 843 414 0 0 0 chr13 33922189 33922234 -86362078 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 843 3955 198 82 86 chr13 33922249 33923310 -86361002 - RLTR21 LTR ERVK -515 1057 1 3 843 320 280 97 88 chr13 33923377 33923604 -86360708 - RLTR14 LTR ERV1 0 382 154 3 843 276 325 142 0 chr13 33925538 33925658 -86358654 + L2 LINE L2 2289 2425 -994 3 843 587 283 22 22 chr13 33927170 33927354 -86356958 + RLTR19 LTR ERVK 316 499 0 3 843 1220 224 131 69 chr13 33928456 33928615 -86355697 + ORR1C2 LTR MaLR 3 171 -213 3 843 549 0 0 0 chr13 33928615 33928676 -86355636 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 843 1220 224 131 69 chr13 33928676 33928876 -86355436 + ORR1C2 LTR MaLR 172 383 -1 3 843 599 237 56 35 chr13 33929126 33929270 -86355042 + B1_Mur2 SINE Alu 3 149 0 3 843 186 43 0 0 chr13 33929467 33929490 -86354822 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 843 243 318 0 67 chr13 33929510 33929611 -86354701 + ID4_ SINE ID 2 96 -56 3 843 405 0 0 0 chr13 33931293 33931338 -86352974 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 843 340 333 80 19 chr13 33931362 33931524 -86352788 + MLT1B-int LTR MaLR 949 1120 -289 3 843 433 274 78 22 chr13 33931512 33931691 -86352621 + MLT1B LTR MaLR 5 193 -197 3 843 1637 259 62 33 chr13 33931696 33932183 -86352129 - RMER19C LTR ERVK 0 611 111 3 843 260 347 77 32 chr13 33932230 33932385 -86351927 + MLT1B LTR MaLR 219 380 -10 3 843 359 204 46 12 chr13 33933137 33933243 -86351069 + B1F2 SINE Alu 32 148 -1 3 843 419 304 35 43 chr13 33933403 33933544 -86350768 + B4A SINE B4 2 141 -151 3 843 945 136 0 0 chr13 33935701 33935855 -86348457 + (GGAA)n Simple_repeat Simple_repeat 4 157 0 3 843 441 0 0 0 chr13 33935855 33935904 -86348408 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 843 393 127 0 0 chr13 33936057 33936136 -86348176 + (TCTCTG)n Simple_repeat Simple_repeat 6 84 0 4 843 310 208 7 27 chr13 33936133 33936281 -86348031 + (TG)n Simple_repeat Simple_repeat 2 146 0 4 843 2031 82 10 10 chr13 33937015 33937311 -86347001 - L1_Mus3 LINE L1 -1 6637 6342 4 843 4688 53 3 5 chr13 33937427 33938012 -86346300 - L1_Mus2 LINE L1 0 6566 5983 4 843 2321 111 3 8 chr13 33938020 33938382 -86345930 + L1_Mm LINE L1 4845 5204 -679 4 843 180 111 0 0 chr13 33939887 33939914 -86344398 + (T)n Simple_repeat Simple_repeat 1 27 0 4 843 23819 63 140 5 chr13 33939943 33945390 -86338922 - L1Md_F2 LINE L1 -2 6583 250 4 843 564 15 0 0 chr13 33945854 33945919 -86338393 + (GAAA)n Simple_repeat Simple_repeat 2 66 0 4 843 270 280 27 36 chr13 33946243 33946354 -86337958 - MLT1A1 LTR MaLR 0 408 299 4 843 219 139 0 0 chr13 33946572 33946608 -86337704 + (T)n Simple_repeat Simple_repeat 1 36 0 4 843 5534 2 0 0 chr13 33946995 33947594 -86336718 + L1Md_A LINE L1 5984 6582 0 4 844 1432 266 40 26 chr13 33947876 33948382 -86335930 - RLTR11A2 LTR ERVK -14 513 1 4 844 436 306 7 7 chr13 33948802 33948937 -86335375 + B1_Mur1 SINE Alu 14 148 -1 4 844 216 0 0 0 chr13 33949130 33949154 -86335158 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 844 1026 141 0 0 chr13 33949154 33949323 -86334989 + (GAAA)n Simple_repeat Simple_repeat 1 170 0 4 844 233 331 93 39 chr13 33949324 33949453 -86334859 - RSINE1 SINE B4 -27 138 3 4 844 223 320 0 0 chr13 33949535 33949613 -86334699 - B1F SINE Alu -5 144 67 4 844 4086 89 12 2 chr13 33949806 33950366 -86333946 + L1_Mus4 LINE L1 6068 6633 -3 4 844 446 0 19 0 chr13 33950394 33950448 -86333864 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 4 844 219 295 38 25 chr13 33952393 33952473 -86331839 + ID SINE ID 5 85 -139 4 844 381 274 58 23 chr13 33952485 33952657 -86331655 + MTD LTR MaLR 10 187 -232 4 844 23 0 0 0 chr13 33953872 33953895 -86330417 + AT_rich Low_complexity Low_complexity 1 23 0 4 844 3113 11 43 0 chr13 33953902 33954254 -86330058 + IAPLTR1_Mm LTR ERVK 1 367 0 4 844 57146 20 15 1 chr13 33954254 33960636 -86323676 + IAPEz-int LTR ERVK 8 6481 0 4 844 3113 11 43 0 chr13 33960636 33960988 -86323324 + IAPLTR1_Mm LTR ERVK 1 367 0 4 844 959 198 47 5 chr13 33962311 33962524 -86321788 + URR1B DNA MER1_type 2 223 -2 4 844 1679 282 58 77 chr13 33962715 33963678 -86320634 - Lx8 LINE L1 -1396 6077 5124 4 844 4065 238 77 95 chr13 33963702 33965520 -86318792 - Lx8 LINE L1 -1515 4365 2581 4 844 1849 132 6 62 chr13 33965734 33966074 -86318238 - ORR1A4 LTR MaLR -8 321 1 4 844 3546 155 31 112 chr13 33966074 33966943 -86317369 - ORR1A4-int LTR MaLR 0 1963 1165 4 844 2232 83 23 188 chr13 33966943 33967373 -86316939 - RLTR10D LTR ERVK 0 359 1 4 844 6315 100 0 35 chr13 33967373 33968275 -86316037 - IAP-d-int LTR ERVK 0 6542 5673 4 844 2135 199 0 5 chr13 33968262 33968640 -86315672 - IAP-d-int LTR ERVK -1160 5382 5007 4 844 1110 200 280 32 chr13 33968640 33969043 -86315269 - IAP-d-int LTR ERVK -6039 503 1 4 844 2186 70 38 191 chr13 33969043 33969467 -86314845 - RLTR10D LTR ERVK 0 359 1 4 844 2048 161 29 7 chr13 33969467 33969910 -86314402 - ORR1A4-int LTR MaLR -793 1170 718 4 844 853 161 74 84 chr13 33969869 33970059 -86314253 - MT2B LTR ERVL -314 287 100 4 844 3368 181 62 3 chr13 33969937 33970698 -86313614 - ORR1A4-int LTR MaLR -1157 806 1 4 844 1828 138 3 53 chr13 33970702 33971040 -86313272 - ORR1A4 LTR MaLR -8 321 1 4 844 2303 102 0 23 chr13 33972878 33973228 -86311084 + L1_Mus4 LINE L1 6290 6631 -5 4 844 259 331 93 43 chr13 33973463 33973741 -86310571 + L2 LINE L2 2388 2679 -740 4 844 3904 192 38 29 chr13 33974847 33974939 -86309373 + L1Md_F2 LINE L1 432 546 -6178 4 844 198 0 0 0 chr13 33974939 33974961 -86309351 + (CAATC)n Simple_repeat Simple_repeat 4 25 0 4 844 19561 180 16 77 chr13 33974961 33977497 -86306815 + L1Md_F2 LINE L1 547 2693 -3184 4 844 4173 41 0 0 chr13 33977497 33977986 -86306326 + L1Md_T LINE L1 6088 6576 -6 4 844 22358 68 0 4 chr13 33977986 33980937 -86303375 + L1Md_F2 LINE L1 2694 5586 -297 4 844 7801 71 4 0 chr13 33980937 33981929 -86302383 + L1Md_F2 LINE L1 5587 6582 0 4 844 5881 16 0 0 chr13 33982339 33983009 -86301303 - L1_Mm LINE L1 -1799 4084 3415 4 844 7036 9 0 0 chr13 33983004 33983781 -86300531 + L1Md_T LINE L1 4810 5586 -297 4 844 8265 51 0 0 chr13 33983781 33984777 -86299535 + L1Md_T LINE L1 5587 6582 0 4 844 1666 183 76 20 chr13 33985853 33986210 -86298102 + ORR1C2 LTR MaLR 5 381 -3 4 844 405 139 0 25 chr13 33986370 33986451 -86297861 + B1_Mur4 SINE Alu 65 143 -7 4 844 645 240 20 0 chr13 33986654 33986800 -86297512 + B1_Mur2 SINE Alu 1 149 0 4 844 222 143 0 23 chr13 33986939 33986982 -86297330 + (CAAA)n Simple_repeat Simple_repeat 4 45 0 4 844 7071 65 6 0 chr13 33987462 33988343 -86295969 + L1_Mus2 LINE L1 5681 6566 0 4 844 282 290 141 21 chr13 33989654 33989848 -86294464 + MLT1B LTR MaLR 46 307 -288 4 844 241 357 131 20 chr13 33990030 33990336 -86293976 + MLT1B-int LTR MaLR 769 1108 -301 4 844 510 277 166 24 chr13 33990336 33990673 -86293639 + MLT1B LTR MaLR 5 389 -1 4 844 4187 173 90 11 chr13 33991632 33992473 -86291839 - RMER13B LTR ERVK 0 908 1 4 844 285 226 160 11 chr13 33992528 33992622 -86291690 + B1_Mur3 SINE Alu 42 149 0 4 844 264 349 78 51 chr13 33992686 33992888 -86291424 + B4 SINE B4 73 279 -13 4 844 288 53 0 0 chr13 33992916 33992954 -86291358 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 844 255 288 0 0 chr13 33993486 33993559 -86290753 - HAL1 LINE L1 -957 1550 1478 4 844 216 0 0 0 chr13 33993730 33993754 -86290558 + (T)n Simple_repeat Simple_repeat 1 24 0 4 844 489 260 385 39 chr13 33993878 33994106 -86290206 - MTE2a LTR MaLR -1 378 71 4 844 225 0 0 0 chr13 33994106 33994131 -86290181 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 844 405 273 19 101 chr13 33994131 33994198 -86290114 - MTE2a LTR MaLR -309 70 10 4 844 278 298 0 80 chr13 33994572 33994685 -86289627 + MT2B LTR ERVL 154 257 -344 4 844 598 232 8 0 chr13 33994590 33994715 -86289597 + B1_Mus2 SINE Alu 8 133 -14 4 844 245 276 11 33 chr13 33994829 33994919 -86289393 - MER2 DNA MER2_type -131 214 127 4 844 547 250 9 0 chr13 33994957 33995073 -86289239 - PB1D10 SINE Alu 0 117 1 4 844 354 45 0 0 chr13 33995452 33995496 -86288816 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 844 728 99 0 26 chr13 33995783 33995897 -86288415 + B1_Mm SINE Alu 21 131 -16 4 844 222 37 0 0 chr13 33996577 33996604 -86287708 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 4 844 301 183 124 14 chr13 33997885 33997992 -86286320 - MLT1A LTR MaLR -251 123 1 4 844 308 319 61 20 chr13 33998939 33998956 -86285356 + B4A SINE B4 72 162 -130 4 844 488 259 0 1 chr13 33998956 33999077 -86285235 + B1_Mur1 SINE Alu 4 122 -27 4 844 527 29 0 14 chr13 33999202 33999272 -86285040 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 844 443 182 13 0 chr13 33999402 33999479 -86284833 - ID4_ SINE ID -4 79 2 4 844 286 279 130 8 chr13 33999494 33999617 -86284695 - B1F SINE Alu -8 141 4 4 844 424 298 58 130 chr13 34001573 34001781 -86282531 + MTD LTR MaLR 4 200 -219 1 844 343 321 89 79 chr13 34002642 34003159 -86281153 + RLTR40 LTR ERVK 50 571 -246 2 844 1343 196 16 10 chr13 34003267 34003571 -86280741 - RLTR11A2 LTR ERVK -9 518 213 3 844 287 222 0 0 chr13 34003704 34003758 -86280554 - B3 SINE B2 -13 203 150 4 844 317 261 488 0 chr13 34003810 34003939 -86280373 - B3 SINE B2 -10 206 15 5 844 1389 71 38 6 chr13 34004669 34004852 -86279460 - B2_Mm2 SINE B2 -6 189 1 6 844 1266 261 37 65 chr13 34005045 34005536 -86278776 - L1_Mur3 LINE L1 -267 5613 5137 7 844 4948 232 67 35 chr13 34005573 34006613 -86277699 - L1_Mur3 LINE L1 -1530 4350 3291 7 844 2831 65 64 5 chr13 34006613 34006987 -86277325 + MTA_Mm LTR MaLR 1 396 0 8 844 4948 232 67 35 chr13 34006987 34007058 -86277254 - L1_Mur3 LINE L1 -2590 3290 3218 7 844 504 0 0 0 chr13 34007058 34007114 -86277198 + (TC)n Simple_repeat Simple_repeat 2 57 0 9 844 4948 232 67 35 chr13 34007114 34007718 -86276594 - L1_Mur3 LINE L1 -2663 3217 2580 7 844 235 310 0 0 chr13 34007741 34007799 -86276513 - B1F2 SINE Alu -87 62 5 1 844 550 282 122 60 chr13 34008186 34008363 -86275949 - RMER12 LTR ERVK -2 1570 1376 1 844 1162 76 0 0 chr13 34008363 34008507 -86275805 + B1_Mus1 SINE Alu 3 146 -2 1 844 5187 131 39 19 chr13 34008507 34009455 -86274857 - RMER12 LTR ERVK -197 1375 1 1 844 216 224 35 0 chr13 34010425 34010483 -86273829 + ID4_ SINE ID 2 61 -22 1 844 874 246 9 28 chr13 34010873 34011086 -86273226 - B3 SINE B2 -5 211 3 1 844 777 219 14 0 chr13 34011217 34011363 -86272949 - B1_Mur1 SINE Alu 0 149 2 1 844 271 369 56 6 chr13 34011809 34011989 -86272323 + L2 LINE L2 2467 2655 -764 1 844 1798 212 194 34 chr13 34012959 34012989 -86271323 + RMER13A LTR ERVK 1 29 -831 1 844 3939 147 32 25 chr13 34012989 34013674 -86270638 + RLTR17 LTR ERVK 3 692 0 1 844 1798 212 194 34 chr13 34013674 34014225 -86270087 + RMER13A LTR ERVK 30 675 -185 1 844 1127 224 68 21 chr13 34014977 34015311 -86269001 + ORR1C2 LTR MaLR 1 384 0 1 844 300 230 81 0 chr13 34015719 34015793 -86268519 + B1_Mur1 SINE Alu 70 149 0 2 844 975 273 84 30 chr13 34015884 34016311 -86268001 + RCHARR1 DNA MER1_type 4 453 -521 2 844 409 218 50 98 chr13 34016335 34016473 -86267839 + B3A SINE B2 54 198 -18 2 844 451 218 149 6 chr13 34016537 34016712 -86267600 + RCHARR1 DNA MER1_type 768 967 -7 2 844 662 194 23 0 chr13 34016737 34016866 -86267446 + B1_Mur2 SINE Alu 18 149 0 2 844 263 256 0 68 chr13 34017068 34017156 -86267156 + ID4_ SINE ID 2 83 0 2 844 22 56 0 0 chr13 34017376 34017412 -86266900 + AT_rich Low_complexity Low_complexity 1 36 0 2 844 814 264 63 126 chr13 34018180 34018688 -86265624 + RLTR12B LTR ERVK 47 522 -6 2 844 1015 252 34 44 chr13 34018827 34019079 -86265233 - B4A SINE B4 0 292 35 2 844 3434 33 2 5 chr13 34019079 34019476 -86264836 + MTA_Mm LTR MaLR 1 396 0 2 844 1015 252 34 44 chr13 34019476 34019518 -86264794 - B4A SINE B4 -258 34 1 2 844 684 241 80 40 chr13 34019696 34019895 -86264417 - B3 SINE B2 -8 208 2 2 844 598 302 56 5 chr13 34020065 34020278 -86264034 + ID_B1 SINE B4 1 224 0 3 844 227 208 0 0 chr13 34020278 34020326 -86263986 + A-rich Low_complexity Low_complexity 1 48 0 3 844 180 0 0 0 chr13 34020443 34020463 -86263849 + (T)n Simple_repeat Simple_repeat 1 20 0 3 844 714 154 122 0 chr13 34020478 34020601 -86263711 - B1_Mus2 SINE Alu -9 138 1 3 844 23 33 0 0 chr13 34021149 34021179 -86263133 + AT_rich Low_complexity Low_complexity 1 30 0 3 844 251 286 14 0 chr13 34021493 34021563 -86262749 + ID4 SINE ID 4 74 -9 3 844 242 295 90 39 chr13 34022316 34022471 -86261841 + MLT1H LTR MaLR 75 237 -312 3 844 269 238 59 12 chr13 34022694 34022779 -86261533 + MLT1H-int LTR MaLR 767 855 -554 3 844 545 304 92 34 chr13 34024371 34024633 -86259679 + B4A SINE B4 2 278 -14 3 844 500 305 132 37 chr13 34025009 34025526 -86258786 - HAL1 LINE L1 -745 1762 1197 3 844 377 237 538 0 chr13 34025548 34025729 -86258583 - MTE2b LTR MaLR -39 340 63 3 844 484 354 42 4 chr13 34026172 34026436 -86257876 - MER2 DNA MER2_type 0 345 72 4 844 353 271 12 0 chr13 34026398 34026483 -86257829 - PB1D10 SINE Alu -26 91 6 4 844 243 0 0 0 chr13 34027207 34027234 -86257078 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 844 215 217 0 48 chr13 34027713 34027776 -86256536 + C-rich Low_complexity Low_complexity 4 63 0 4 844 412 230 53 73 chr13 34028468 34028618 -86255694 + RLTR9B LTR ERVK 291 437 0 4 844 2168 154 170 40 chr13 34029225 34029724 -86254588 + RMER16-int LTR ERVK 256 819 -4587 4 844 2451 199 17 7 chr13 34029729 34030194 -86254118 + RMER16-int LTR ERVK 1089 1558 -3848 4 844 5000 240 35 23 chr13 34030205 34032129 -86252183 + ETnERV2-int LTR ERVK 3042 5794 -1612 4 844 1171 146 5 11 chr13 34032174 34032361 -86251951 + RMER16-int LTR ERVK 3791 3976 -1430 4 844 1102 283 16 16 chr13 34032569 34032957 -86251355 + RLTR6-int LTR ERV1 7277 7664 -114 4 844 425 277 114 47 chr13 34033396 34033727 -86250585 + RLTR9A2 LTR ERVK 12 383 0 4 844 507 17 0 0 chr13 34034567 34034627 -86249685 + (GA)n Simple_repeat Simple_repeat 2 61 0 4 844 5734 110 21 1 chr13 34034627 34035466 -86248846 - L1_Mus3 LINE L1 -2 6636 5781 5 844 15523 46 11 1 chr13 34035467 34038104 -86246208 - L1Md_F2 LINE L1 -11 6571 3910 5 844 2157 105 0 13 chr13 34038105 34038413 -86245899 - L1_Mm LINE L1 -87 5796 5493 5 844 579 281 0 0 chr13 34038588 34038727 -86245585 - B3A SINE B2 -57 141 3 5 844 322 249 23 0 chr13 34038788 34038884 -86245428 + MER72B LTR ERV1 415 502 -266 5 844 258 32 0 0 chr13 34039365 34039396 -86244916 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 844 410 53 0 17 chr13 34039396 34039454 -86244858 + (GA)n Simple_repeat Simple_repeat 1 57 0 5 844 303 195 103 0 chr13 34039480 34039567 -86244745 + RMER12 LTR ERVK 1145 1240 -82 5 844 633 213 45 26 chr13 34039583 34039737 -86244575 + RMER12 LTR ERVK 1166 1322 0 5 844 264 30 0 0 chr13 34039772 34039805 -86244507 + (TTG)n Simple_repeat Simple_repeat 2 34 0 5 844 250 235 3 60 chr13 34039806 34039898 -86244414 - MLT1A0 LTR MaLR -49 359 257 6 844 786 171 26 64 chr13 34040050 34040206 -86244106 + B1_Mur4 SINE Alu 1 150 0 6 844 352 194 100 20 chr13 34040283 34040383 -86243929 - MLT1A0 LTR MaLR -257 108 1 6 844 609 261 22 0 chr13 34041087 34041225 -86243087 + B1_Mur2 SINE Alu 1 141 -8 6 844 1289 214 247 11 chr13 34041229 34041678 -86242634 - RMER19B LTR ERVK -39 863 309 6 844 459 0 0 0 chr13 34041725 34041776 -86242536 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 6 844 192 77 0 0 chr13 34041780 34041806 -86242506 + (GGA)n Simple_repeat Simple_repeat 2 27 0 6 844 199 133 44 0 chr13 34041844 34041889 -86242423 + GA-rich Low_complexity Low_complexity 1 47 0 6 844 207 0 0 0 chr13 34042295 34042318 -86241994 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 6 844 299 182 14 108 chr13 34042318 34042392 -86241920 - ID4_ SINE ID -8 75 9 6 844 357 116 0 0 chr13 34042458 34042527 -86241785 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 6 844 378 197 14 0 chr13 34042531 34042602 -86241710 - ID4_ SINE ID -10 73 2 7 844 320 268 14 21 chr13 34042611 34042740 -86241572 - B1F SINE Alu -2 147 3 7 844 331 286 208 6 chr13 34044361 34044544 -86239768 + ID_B1 SINE B4 2 221 -3 7 844 1031 122 38 32 chr13 34045266 34045452 -86238860 + B2_Mm2 SINE B2 1 187 -8 7 844 880 227 82 43 chr13 34046996 34047203 -86237109 + B3 SINE B2 2 216 0 7 844 1619 273 12 33 chr13 34047205 34047724 -86236588 + Charlie12 DNA MER1_type 1888 2395 -478 7 844 366 189 132 11 chr13 34047723 34047814 -86236498 - B1_Mus1 SINE Alu -46 102 1 7 844 337 248 33 33 chr13 34047814 34047934 -86236378 + Charlie12 DNA MER1_type 2386 2505 -368 7 844 2330 77 6 9 chr13 34047995 34048310 -86236002 + L1_Mus3 LINE L1 6318 6631 -7 7 844 550 234 24 0 chr13 34048411 34048535 -86235777 - B1_Mus2 SINE Alu 0 147 21 7 844 665 115 10 0 chr13 34048539 34048643 -86235669 + B1_Mur3 SINE Alu 18 122 -27 7 844 595 245 58 26 chr13 34048654 34048843 -86235469 + Charlie12 DNA MER1_type 2679 2873 0 7 844 282 339 158 42 chr13 34050079 34050392 -86233920 - MLT2B3 LTR ERVL -9 545 5 8 844 430 287 18 9 chr13 34050392 34050501 -86233811 - MTEa LTR MaLR -265 114 5 8 844 904 218 63 15 chr13 34050504 34050709 -86233603 + B3 SINE B2 2 216 0 8 844 835 252 38 53 chr13 34050846 34051110 -86233202 + B4A SINE B4 32 291 -1 8 844 490 273 63 5 chr13 34051836 34052032 -86232280 + ORR1E LTR MaLR 1 230 -129 8 844 712 260 11 6 chr13 34052230 34052412 -86231900 + B3A SINE B2 1 183 -15 8 844 765 276 131 30 chr13 34052499 34052676 -86231636 + L1MB4 LINE L1 5587 5777 -403 8 844 414 0 0 0 chr13 34052676 34052722 -86231590 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 844 765 276 131 30 chr13 34052722 34052894 -86231418 + L1MB4 LINE L1 5778 5979 -201 8 844 804 278 48 100 chr13 34052894 34053294 -86231018 + MTE2a LTR MaLR 1 379 0 8 844 765 276 131 30 chr13 34053294 34053339 -86230973 + L1MB4 LINE L1 5980 6021 -159 8 844 318 290 65 52 chr13 34053470 34053699 -86230613 - ORR1E LTR MaLR -122 237 6 8 844 339 252 30 0 chr13 34053712 34053811 -86230501 + L1MB4 LINE L1 6028 6129 -51 8 844 5192 94 29 14 chr13 34053987 34054744 -86229568 + Lx LINE L1 5887 6654 0 9 844 3048 53 0 8 chr13 34055544 34055927 -86228385 - L1Md_F2 LINE L1 -2 6580 6201 9 844 333 294 116 6 chr13 34056079 34056243 -86228069 - L1MD1 LINE L1 -250 5992 5811 9 844 180 0 0 0 chr13 34056243 34056263 -86228049 + (T)n Simple_repeat Simple_repeat 1 20 0 9 844 203 213 16 16 chr13 34058341 34058403 -86225909 + T-rich Low_complexity Low_complexity 2 63 0 9 844 1873 208 11 8 chr13 34058427 34058791 -86225521 - ORR1D2 LTR MaLR 0 370 6 9 844 2298 93 9 6 chr13 34058855 34059181 -86225131 + ORR1A2 LTR MaLR 1 327 0 9 844 1256 143 76 5 chr13 34059381 34059592 -86224720 + URR1A DNA MER1_type 1 226 0 9 844 387 0 0 0 chr13 34059833 34059876 -86224436 + (A)n Simple_repeat Simple_repeat 1 43 0 9 844 985 114 12 12 chr13 34060541 34060709 -86223603 + (TATATG)n Simple_repeat Simple_repeat 2 169 0 9 844 201 213 0 0 chr13 34060709 34060756 -86223556 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 844 1110 117 14 105 chr13 34061270 34061480 -86222832 + B2_Mm2 SINE B2 5 195 0 1 844 671 95 9 0 chr13 34061498 34061603 -86222709 + (GAAA)n Simple_repeat Simple_repeat 2 107 0 1 844 631 276 112 9 chr13 34061723 34061946 -86222366 + B4A SINE B4 21 266 -26 1 844 2382 195 101 42 chr13 34061929 34062772 -86221540 - RLTR13D6 LTR ERVK -33 869 1 1 844 777 202 149 27 chr13 34062991 34063179 -86221133 - B3 SINE B2 -5 211 1 1 844 485 299 35 41 chr13 34063194 34063365 -86220947 - B4A SINE B4 -80 212 43 1 844 2644 144 10 7 chr13 34064718 34065136 -86219176 + MTC LTR MaLR 3 421 0 1 844 1793 187 54 50 chr13 34065136 34065466 -86218846 + MTC-int LTR MaLR 1 335 -923 1 844 2022 160 79 0 chr13 34065466 34065822 -86218490 - ORR1C2 LTR MaLR 0 384 1 1 844 1793 187 54 50 chr13 34065822 34065935 -86218377 + MTC-int LTR MaLR 336 446 -812 1 844 617 101 20 0 chr13 34066409 34066508 -86217804 - Lx3C LINE L1 -2 6974 6874 1 844 21065 88 8 4 chr13 34066510 34070121 -86214191 - L1_Mus1 LINE L1 0 6567 2941 1 844 1821 130 3 44 chr13 34070140 34070437 -86213875 - Lx3C LINE L1 -111 6865 6581 1 844 2852 103 8 77 chr13 34070432 34070668 -86213644 - L1_Mur1 LINE L1 -890 4996 4798 1 844 1118 86 0 0 chr13 34070668 34070807 -86213505 - B1_Mus1 SINE Alu -9 139 1 1 844 2852 103 8 77 chr13 34070807 34071064 -86213248 - L1_Mur1 LINE L1 -1089 4797 4537 1 844 180 0 0 0 chr13 34071540 34071560 -86212752 + (T)n Simple_repeat Simple_repeat 1 20 0 1 844 3039 37 0 0 chr13 34072180 34072533 -86211779 - L1_Mus2 LINE L1 -1 6565 6213 1 844 2313 171 26 14 chr13 34072701 34073117 -86211195 - MTC LTR MaLR 0 421 1 1 844 576 277 35 18 chr13 34075132 34075301 -86209011 + ID_B1 SINE B4 23 194 -30 1 844 456 19 0 0 chr13 34075385 34075438 -86208874 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 844 647 307 5 36 chr13 34075452 34075648 -86208664 - B4A SINE B4 -12 280 91 1 844 2929 57 41 10 chr13 34075662 34076052 -86208260 - L1Md_F2 LINE L1 0 6582 6181 1 844 212 171 0 0 chr13 34076059 34076094 -86208218 - B3 SINE B2 -181 35 1 1 844 314 0 49 0 chr13 34076232 34076273 -86208039 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 844 1153 56 0 7 chr13 34076273 34076411 -86207901 - B1_Mm SINE Alu -4 143 6 1 844 357 24 0 0 chr13 34078265 34078307 -86206005 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 844 310 298 92 43 chr13 34078311 34078551 -86205761 - MIR SINE MIR -19 243 2 1 845 233 346 81 6 chr13 34078863 34079023 -86205289 + MLT1K LTR MaLR 421 592 -3 1 845 252 229 23 46 chr13 34079649 34079736 -86204576 + MTE2a LTR MaLR 290 374 -5 1 845 291 211 66 0 chr13 34079844 34079920 -86204392 - MIR SINE MIR -98 164 84 1 845 315 96 77 0 chr13 34080062 34080114 -86204198 - ORR1B2 LTR MaLR 0 367 312 1 845 590 179 44 35 chr13 34080113 34080273 -86204039 - B3 SINE B2 -1 194 28 1 845 5762 91 24 12 chr13 34080296 34081118 -86203194 - Lx2A1 LINE L1 -1 7007 6176 1 845 1531 174 24 63 chr13 34081167 34081498 -86202814 - ORR1B2 LTR MaLR -49 318 1 1 845 380 272 23 23 chr13 34081846 34081974 -86202338 + B1F SINE Alu 22 149 0 1 845 230 264 136 0 chr13 34082460 34082570 -86201742 + L1MEe LINE L1 905 1029 -5090 1 845 704 272 81 35 chr13 34082570 34082829 -86201483 + B4A SINE B4 4 274 -18 1 845 308 266 75 53 chr13 34083099 34083325 -86200987 + L1MEe LINE L1 1553 1783 -4366 1 845 519 285 50 21 chr13 34083530 34083670 -86200642 + ID_B1 SINE B4 80 223 -1 1 845 226 318 0 0 chr13 34083672 34083735 -86200577 + GA-rich Low_complexity Low_complexity 4 66 0 1 845 1735 91 113 0 chr13 34083748 34084022 -86200290 + ORR1A3 LTR MaLR 14 318 -8 1 845 1043 225 134 30 chr13 34084712 34085047 -86199265 - ORR1D2 LTR MaLR 0 370 1 1 845 523 145 48 0 chr13 34085943 34086067 -86198245 + GA-rich Low_complexity Low_complexity 2 131 0 1 845 438 289 182 30 chr13 34086341 34086544 -86197768 + B4A SINE B4 48 281 -11 1 845 552 226 219 9 chr13 34086657 34086867 -86197445 + L1M2 LINE L1 4792 5045 -1098 1 845 578 277 58 0 chr13 34086889 34087044 -86197268 + B3A SINE B2 2 165 -33 1 845 998 261 42 19 chr13 34088685 34088950 -86195362 + MTEb LTR MaLR 56 326 -53 1 845 1542 266 78 12 chr13 34089822 34090248 -86194064 + Lx6 LINE L1 6969 7422 -38 1 845 247 278 100 47 chr13 34090250 34090420 -86193892 - L1M5 LINE L1 -2414 3732 3554 1 845 718 170 81 6 chr13 34090437 34090597 -86193715 + ORR1B2 LTR MaLR 6 177 -190 1 845 409 160 9 9 chr13 34090597 34090704 -86193608 + CT-rich Low_complexity Low_complexity 2 108 0 1 845 691 193 170 6 chr13 34090706 34090888 -86193424 + ORR1B2 LTR MaLR 156 367 0 1 845 518 315 107 29 chr13 34091002 34091283 -86193029 + L1MD2 LINE L1 531 833 -5714 1 845 1215 35 7 0 chr13 34091293 34091438 -86192874 + B1_Mus2 SINE Alu 1 146 -1 1 845 28 29 0 0 chr13 34091443 34091478 -86192834 + AT_rich Low_complexity Low_complexity 1 35 0 1 845 290 332 71 10 chr13 34091538 34091736 -86192576 + L1MD2 LINE L1 965 1174 -5466 1 845 481 293 150 43 chr13 34092316 34092616 -86191696 - L1MC1 LINE L1 -304 6029 5698 1 845 893 193 127 0 chr13 34092633 34092814 -86191498 + B3 SINE B2 7 210 -6 1 845 681 266 53 11 chr13 34092835 34093025 -86191287 + B3A SINE B2 1 198 0 1 845 293 332 142 30 chr13 34093068 34093301 -86191011 + B4 SINE B4 13 271 -21 1 845 252 0 0 0 chr13 34093318 34093346 -86190966 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 845 180 0 0 0 chr13 34093369 34093389 -86190923 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1 845 267 265 209 10 chr13 34093487 34093736 -86190576 - L1MC1 LINE L1 -779 5554 5262 1 845 195 42 0 0 chr13 34095895 34095919 -86188393 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1 845 713 214 0 21 chr13 34095920 34096063 -86188249 - B1_Mur3 SINE Alu -7 142 3 1 845 363 167 0 0 chr13 34096617 34096677 -86187635 - B1F1 SINE Alu -2 147 88 1 845 304 208 53 40 chr13 34096677 34096692 -86187620 - ID_B1 SINE B4 -2 222 147 1 845 274 267 0 0 chr13 34097031 34097091 -86187221 + ID4_ SINE ID 24 83 0 1 845 866 210 102 0 chr13 34097447 34097633 -86186679 - B3 SINE B2 -4 212 8 1 845 459 179 107 33 chr13 34097680 34097801 -86186511 - B1_Mur2 SINE Alu -15 134 5 1 845 314 300 18 0 chr13 34098081 34098191 -86186121 + PB1D10 SINE Alu 1 112 -5 1 845 186 43 0 0 chr13 34098471 34098494 -86185818 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 1 845 229 255 150 33 chr13 34099156 34099276 -86185036 - MIRb SINE MIR -58 210 79 1 845 529 274 37 0 chr13 34101250 34101385 -86182927 - B1F1 SINE Alu -8 141 2 1 845 225 0 0 0 chr13 34101396 34101421 -86182891 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1 845 229 276 26 13 chr13 34102675 34102752 -86181560 + (CTTG)n Simple_repeat Simple_repeat 3 80 0 1 845 321 157 13 79 chr13 34102757 34102833 -86181479 - B1_Mur2 SINE Alu 0 149 79 1 845 281 288 118 0 chr13 34103883 34103979 -86180333 - PB1 SINE Alu -38 89 2 1 845 213 121 0 0 chr13 34104581 34104614 -86179698 + (TAA)n Simple_repeat Simple_repeat 1 33 0 1 845 269 237 61 0 chr13 34104752 34104866 -86179446 - Lx9 LINE L1 -21 7623 7503 1 845 213 39 0 0 chr13 34106554 34106580 -86177732 + (CAAAAA)n Simple_repeat Simple_repeat 1 26 0 1 845 329 280 27 0 chr13 34106667 34106742 -86177570 + RSINE1 SINE B4 74 150 -15 1 845 609 259 43 36 chr13 34107278 34107418 -86176894 + RSINE1 SINE B4 3 143 -22 1 845 293 217 0 12 chr13 34107429 34107513 -86176799 + CT-rich Low_complexity Low_complexity 3 85 0 1 845 24 0 0 0 chr13 34107576 34107600 -86176712 + AT_rich Low_complexity Low_complexity 1 24 0 1 845 318 50 0 0 chr13 34107849 34107889 -86176423 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 845 1342 241 84 39 chr13 34109089 34109448 -86174864 - MTEa LTR MaLR -4 375 1 1 845 1152 35 35 7 chr13 34109630 34109773 -86174539 - B1_Mus2 SINE Alu 0 147 1 1 845 876 265 94 36 chr13 34109792 34110204 -86174108 - L1MB3 LINE L1 -28 6155 5725 1 845 452 232 32 0 chr13 34110468 34110563 -86173749 - B1_Mur2 SINE Alu -51 98 1 1 845 353 256 112 49 chr13 34110662 34110867 -86173445 - L1MDa LINE L1 -4191 2442 2225 1 845 555 352 89 62 chr13 34111087 34111538 -86172774 - MER21B LTR ERV1 -264 599 137 1 845 1771 140 91 15 chr13 34111711 34112052 -86172260 - ORR1D1 LTR MaLR 0 374 8 1 845 769 316 63 35 chr13 34112053 34112479 -86171833 - L1MDa LINE L1 -6181 452 15 1 845 198 0 0 0 chr13 34112479 34112501 -86171811 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 1 845 930 259 95 4 chr13 34112934 34113198 -86171114 + B4 SINE B4 1 288 -4 1 845 422 204 10 0 chr13 34113542 34113645 -86170667 + GA-rich Low_complexity Low_complexity 2 105 0 1 845 270 235 162 0 chr13 34113724 34113792 -86170520 + ID4 SINE ID 5 83 0 1 845 234 219 0 0 chr13 34114091 34114155 -86170157 + CT-rich Low_complexity Low_complexity 4 67 0 1 845 481 295 61 40 chr13 34114345 34114642 -86169670 + L1M5 LINE L1 2349 2651 -3495 1 845 896 262 82 112 chr13 34114675 34115066 -86169246 - MTE2a LTR MaLR 0 379 1 1 845 253 291 70 0 chr13 34115159 34115245 -86169067 + B3 SINE B2 1 92 -124 1 845 361 265 50 50 chr13 34115368 34115507 -86168805 + L1M5 LINE L1 5298 5436 -737 1 845 27 73 0 0 chr13 34116378 34116433 -86167879 + AT_rich Low_complexity Low_complexity 1 55 0 1 845 690 244 158 26 chr13 34116534 34116614 -86167698 - L1MB4 LINE L1 -4 6176 6075 1 845 3159 46 18 3 chr13 34116614 34117004 -86167308 + MTA_Mm LTR MaLR 1 396 0 1 845 690 279 203 32 chr13 34117004 34117641 -86166671 - L1MB4 LINE L1 -106 6074 5302 1 845 292 301 17 42 chr13 34117644 34117762 -86166550 - PB1D10 SINE Alu -2 115 1 1 845 390 306 29 59 chr13 34117762 34117846 -86166466 - ID SINE ID -144 80 2 1 845 1232 250 141 32 chr13 34117848 34117892 -86166420 - L1MB4 LINE L1 -814 5332 5289 1 845 192 97 0 0 chr13 34117892 34117923 -86166389 + (TTG)n Simple_repeat Simple_repeat 1 31 0 2 845 1232 250 141 32 chr13 34117923 34118447 -86165865 - L1MB4 LINE L1 -858 5288 4702 1 845 280 64 0 41 chr13 34119064 34119113 -86165199 + (TATG)n Simple_repeat Simple_repeat 4 50 0 2 845 227 227 91 0 chr13 34119180 34119246 -86165066 - B3A SINE B2 -125 73 2 2 845 288 145 60 84 chr13 34120775 34120858 -86163454 + ID4 SINE ID 2 82 -1 2 845 192 340 10 41 chr13 34120986 34121084 -86163228 - L2c LINE L2 -2 3385 3291 2 845 548 224 64 92 chr13 34121493 34121744 -86162568 - L1M2 LINE L1 -575 5725 5482 2 845 331 215 92 0 chr13 34122073 34122138 -86162174 + ID4_ SINE ID 2 72 -11 2 845 848 187 137 16 chr13 34122293 34122483 -86161829 - B3 SINE B2 -3 213 1 2 845 449 234 37 0 chr13 34122770 34122877 -86161435 + PB1D10 SINE Alu 2 112 -5 2 845 267 325 105 8 chr13 34122939 34123063 -86161249 - MER58A DNA MER1_type -88 136 1 2 845 234 0 0 0 chr13 34123393 34123419 -86160893 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 845 578 189 70 26 chr13 34123438 34123552 -86160760 - B1_Mur2 SINE Alu -29 120 2 2 845 432 237 107 77 chr13 34125752 34125921 -86158391 - MER20 DNA MER1_type -17 202 29 2 845 822 131 53 8 chr13 34125952 34126083 -86158229 - B1_Mur4 SINE Alu -13 137 1 2 845 183 80 0 0 chr13 34126969 34126994 -86157318 + (CATATA)n Simple_repeat Simple_repeat 3 27 0 2 845 780 121 280 7 chr13 34127419 34127569 -86156743 - B2_Mm2 SINE B2 -4 191 1 2 845 183 80 0 0 chr13 34127732 34127757 -86156555 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2 845 247 128 0 0 chr13 34127787 34127826 -86156486 - RSINE1 SINE B4 -36 129 91 2 845 286 207 0 0 chr13 34127985 34128043 -86156269 + PB1D10 SINE Alu 23 80 -37 2 845 258 285 66 98 chr13 34128656 34128839 -86155473 + ORR1D2 LTR MaLR 63 239 -131 2 845 342 221 168 0 chr13 34129090 34129185 -86155127 + ID_B1 SINE B4 85 195 -29 2 845 261 0 0 0 chr13 34130053 34130082 -86154230 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 845 210 37 0 0 chr13 34130415 34130442 -86153870 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 845 260 290 41 41 chr13 34131176 34131273 -86153039 + MIRb SINE MIR 25 121 -147 2 845 21 0 0 0 chr13 34131321 34131342 -86152970 + AT_rich Low_complexity Low_complexity 1 21 0 2 845 2286 122 97 22 chr13 34131372 34131783 -86152529 - RMER10A LTR ERVL 0 442 1 2 845 2244 149 57 17 chr13 34131960 34132362 -86151950 - MTC LTR MaLR -3 418 1 2 845 21 0 0 0 chr13 34133637 34133658 -86150654 + AT_rich Low_complexity Low_complexity 1 21 0 2 845 240 143 0 0 chr13 34134189 34134231 -86150081 + (TTG)n Simple_repeat Simple_repeat 1 42 0 2 845 180 111 0 0 chr13 34134965 34134992 -86149320 + (T)n Simple_repeat Simple_repeat 1 27 0 2 845 654 197 68 0 chr13 34134994 34135126 -86149186 - B1_Mus2 SINE Alu 0 147 7 2 845 1155 100 346 81 chr13 34135130 34135390 -86148922 - ORR1A4 LTR MaLR 0 329 1 2 845 387 283 19 19 chr13 34135417 34135525 -86148787 - PB1D10 SINE Alu -9 108 1 2 845 868 236 122 18 chr13 34135797 34136026 -86148286 - MTD LTR MaLR -148 271 19 2 845 230 270 0 129 chr13 34136710 34136795 -86147517 - MER81 DNA AcHobo -3 111 38 2 845 244 283 0 0 chr13 34136912 34136965 -86147347 - B1F1 SINE Alu -94 55 3 2 845 372 22 0 0 chr13 34137966 34138011 -86146301 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 845 359 350 0 0 chr13 34139068 34139171 -86145141 - PB1D10 SINE Alu -9 108 6 2 845 2491 146 34 12 chr13 34139665 34140075 -86144237 - MTC LTR MaLR 0 421 3 2 845 316 242 0 21 chr13 34140299 34140392 -86143920 - PB1D9 SINE Alu -8 112 22 2 845 308 261 152 0 chr13 34140465 34140557 -86143755 + MER44D DNA MER2_type 11 116 -589 2 845 755 258 62 9 chr13 34140745 34140956 -86143356 - B4 SINE B4 -69 223 2 2 845 270 0 0 0 chr13 34141848 34141878 -86142434 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 845 424 278 87 0 chr13 34142634 34142749 -86141563 + PB1 SINE Alu 1 125 -2 2 845 555 90 0 0 chr13 34142752 34142830 -86141482 + (TGGA)n Simple_repeat Simple_repeat 4 81 0 2 845 293 252 86 19 chr13 34143423 34143528 -86140784 + MER58D DNA MER1_type 273 384 -2 2 845 523 222 237 14 chr13 34144087 34144370 -86139942 - L1MD LINE L1 -2822 3324 2979 2 845 1875 238 21 52 chr13 34144394 34144635 -86139677 - MT2A LTR ERVL -69 464 240 2 845 1867 224 22 7 chr13 34144635 34145048 -86139264 - MTD LTR MaLR 0 419 1 2 845 1875 238 21 52 chr13 34145048 34145285 -86139027 - MT2A LTR ERVL -294 239 1 2 845 431 314 51 35 chr13 34145288 34145542 -86138770 - L1MD LINE L1 -3172 2974 2717 2 845 336 83 0 0 chr13 34146567 34146615 -86137697 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 845 337 305 171 8 chr13 34146661 34146790 -86137522 - B4A SINE B4 0 292 143 2 845 462 287 0 0 chr13 34146829 34146944 -86137368 - PB1 SINE Alu -7 120 6 2 845 905 290 96 53 chr13 34147156 34147648 -86136664 + MER44B DNA MER2_type 5 517 -33 2 845 1894 146 62 12 chr13 34147742 34148089 -86136223 - ORR1D1 LTR MaLR -4 375 1 2 845 284 314 130 14 chr13 34148403 34148610 -86135702 - MIR SINE MIR -10 252 22 2 845 801 172 25 14 chr13 34148898 34149075 -86135237 - B3 SINE B2 -10 185 1 2 845 22 0 0 0 chr13 34149081 34149103 -86135209 + AT_rich Low_complexity Low_complexity 1 22 0 2 845 183 42 0 0 chr13 34149431 34149455 -86134857 + (CACCC)n Simple_repeat Simple_repeat 3 26 0 2 845 847 134 68 25 chr13 34149792 34149953 -86134359 - B3 SINE B2 -48 168 1 2 845 530 289 80 9 chr13 34150911 34151124 -86133188 + MER2 DNA MER2_type 96 323 -22 2 845 2814 177 58 53 chr13 34151130 34151698 -86132614 - RMER15 LTR ERVL 0 575 5 2 845 229 243 88 29 chr13 34152087 34152230 -86132082 - L2a LINE L2 -208 3167 3027 2 845 273 277 58 16 chr13 34153263 34153384 -86130928 - ORR1E LTR MaLR -210 149 24 2 845 536 208 38 0 chr13 34154217 34154323 -86129989 + B1_Mur1 SINE Alu 1 110 -39 2 845 390 317 67 0 chr13 34154323 34154337 -86129975 + B4 SINE B4 86 213 -79 2 845 525 16 0 0 chr13 34155434 34155496 -86128816 + (TTTTG)n Simple_repeat Simple_repeat 2 63 0 2 845 1025 96 0 29 chr13 34155496 34155636 -86128676 - B1_Mus2 SINE Alu -9 138 3 2 845 21 0 0 0 chr13 34156821 34156842 -86127470 + AT_rich Low_complexity Low_complexity 1 21 0 2 845 1135 70 6 0 chr13 34156924 34157082 -86127230 + RMER4B LTR ERVK 17 175 -410 2 845 1007 80 0 0 chr13 34157078 34157216 -86127096 + B1_Mus1 SINE Alu 11 148 0 2 845 1082 137 179 6 chr13 34157241 34157584 -86126728 + RMER4B LTR ERVK 171 572 -13 2 845 4684 70 13 3 chr13 34158578 34159198 -86125114 + L1_Mus3 LINE L1 6005 6630 -8 2 845 234 0 0 0 chr13 34159198 34159224 -86125088 + (GA)n Simple_repeat Simple_repeat 2 27 0 2 845 671 256 5 76 chr13 34159634 34159845 -86124467 + Tigger5 DNA MER2_type 2142 2337 -69 2 845 932 151 7 7 chr13 34159885 34160032 -86124280 - B1_Mus1 SINE Alu 0 148 2 2 845 631 281 17 11 chr13 34161041 34161221 -86123091 - MLT2B4 LTR ERVL -371 185 5 2 845 650 282 60 83 chr13 34161671 34162069 -86122243 - RLTR12B LTR ERVK -25 503 115 2 845 226 312 54 0 chr13 34162274 34162367 -86121945 - MIRb SINE MIR -39 229 132 2 845 284 311 16 16 chr13 34163605 34163729 -86120583 + (TCCA)n Simple_repeat Simple_repeat 1 124 0 2 845 1236 71 6 0 chr13 34164156 34164325 -86119987 - B2_Mm1a SINE B2 -22 171 2 2 845 345 62 0 0 chr13 34165060 34165108 -86119204 + (CCCCCT)n Simple_repeat Simple_repeat 4 51 0 2 845 191 114 29 0 chr13 34172789 34172824 -86111488 + (TATATG)n Simple_repeat Simple_repeat 6 41 0 2 845 21 26 0 26 chr13 34172829 34172849 -86111463 + AT_rich Low_complexity Low_complexity 1 20 0 2 845 408 296 57 38 chr13 34172849 34173007 -86111305 + RSINE1 SINE B4 3 163 -2 2 845 21 26 0 26 chr13 34173007 34173025 -86111287 + AT_rich Low_complexity Low_complexity 1 18 0 2 845 1356 108 0 10 chr13 34173190 34173386 -86110926 + B2_Mm2 SINE B2 1 194 -1 2 845 449 321 30 41 chr13 34173726 34173895 -86110417 + MER2 DNA MER2_type 121 287 -58 2 845 383 358 21 38 chr13 34174254 34174440 -86109872 + ORR1E LTR MaLR 1 183 -176 2 845 1397 156 9 0 chr13 34174671 34174895 -86109417 + URR1A DNA MER1_type 1 226 0 2 845 2084 68 28 130 chr13 34174962 34175042 -86109270 + ORR1A2 LTR MaLR 1 82 -245 2 845 3625 52 0 0 chr13 34175042 34175484 -86108828 + L1Md_F2 LINE L1 6137 6578 -4 2 845 2084 68 28 130 chr13 34175484 34175758 -86108554 + ORR1A2 LTR MaLR 83 319 -8 2 845 762 264 194 11 chr13 34176846 34177129 -86107183 + MER2 DNA MER2_type 2 336 -9 2 845 22 0 0 0 chr13 34177196 34177218 -86107094 + AT_rich Low_complexity Low_complexity 1 22 0 2 845 442 345 152 28 chr13 34177459 34177847 -86106465 + MLT1E1 LTR MaLR 218 653 -1 2 845 946 275 52 4 chr13 34177899 34178151 -86106161 - MER2 DNA MER2_type -74 271 8 2 845 280 206 167 0 chr13 34179613 34179739 -86104573 + L1MA6 LINE L1 6094 6240 -60 2 845 661 155 0 0 chr13 34181844 34181947 -86102365 + ORR1D2 LTR MaLR 264 366 -4 2 845 1573 261 52 36 chr13 34181967 34182408 -86101904 + ORR1D2-int LTR MaLR 582 1029 -341 2 845 4645 119 31 7 chr13 34182408 34183087 -86101225 + RMER19A LTR ERVK 43 737 0 2 845 735 218 103 6 chr13 34183087 34183261 -86101051 + ORR1D2-int LTR MaLR 1180 1370 0 2 845 1428 208 65 62 chr13 34183261 34183395 -86100917 + ORR1D2 LTR MaLR 1 141 -229 2 845 1236 167 13 67 chr13 34183395 34183633 -86100679 - URR1B DNA MER1_type 0 225 1 2 845 1428 208 65 62 chr13 34183633 34183867 -86100445 + ORR1D2 LTR MaLR 142 370 0 2 845 2759 184 35 27 chr13 34183887 34184405 -86099907 + RMER5 LTR ERV1 2 523 -11 2 845 1286 27 0 0 chr13 34185201 34185348 -86098964 - B1_Mm SINE Alu 0 147 1 3 845 540 296 7 20 chr13 34185391 34185539 -86098773 + RSINE1 SINE B4 3 148 -17 3 845 378 0 0 0 chr13 34185549 34185591 -86098721 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 3 845 717 289 66 15 chr13 34185608 34185805 -86098507 + B3 SINE B2 2 208 -8 3 845 551 226 107 53 chr13 34185837 34186024 -86098288 + B3A SINE B2 2 198 0 3 845 226 313 0 155 chr13 34186146 34186301 -86098011 + MT2B2 LTR ERVL 126 256 -328 3 845 508 284 6 69 chr13 34186188 34186199 -86098113 + ID_B1 SINE B4 76 158 -66 3 845 739 261 0 0 chr13 34186199 34186341 -86097971 + B1F SINE Alu 2 143 -6 3 845 573 292 110 62 chr13 34186349 34186641 -86097671 + HAL1 LINE L1 1030 1335 -1172 3 845 864 166 0 0 chr13 34187688 34187851 -86096461 + GA-rich Low_complexity Low_complexity 1 163 0 3 845 186 71 0 0 chr13 34187956 34187984 -86096328 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 3 845 501 17 0 0 chr13 34189420 34189478 -86094834 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 845 1239 165 238 6 chr13 34189691 34190002 -86094310 + ORR1C2 LTR MaLR 2 384 0 3 845 1835 169 137 31 chr13 34190057 34190359 -86093953 - RMER16 LTR ERVK 0 533 200 3 845 2137 76 4 0 chr13 34190359 34190636 -86093676 - L1_Mus1 LINE L1 0 6567 6290 3 845 1835 176 136 27 chr13 34190636 34190774 -86093538 - RMER16 LTR ERVK -334 199 1 3 845 337 178 0 38 chr13 34191017 34191122 -86093190 + GA-rich Low_complexity Low_complexity 3 103 0 3 845 200 91 68 0 chr13 34191153 34191197 -86093115 + T-rich Low_complexity Low_complexity 5 51 0 3 845 512 283 10 100 chr13 34191464 34191664 -86092648 + B3A SINE B2 1 182 -16 3 845 21 82 0 0 chr13 34191678 34191727 -86092585 + AT_rich Low_complexity Low_complexity 1 49 0 3 845 1038 99 0 27 chr13 34191731 34191877 -86092435 + B1_Mm SINE Alu 1 142 -5 3 845 255 61 0 0 chr13 34191880 34191913 -86092399 + (A)n Simple_repeat Simple_repeat 1 33 0 3 845 341 237 53 21 chr13 34192064 34192159 -86092153 + RLTR42-int LTR ERVK 1687 1784 -3738 3 845 261 0 0 0 chr13 34193005 34193034 -86091278 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 3 845 378 0 0 0 chr13 34193076 34193118 -86091194 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 845 287 294 27 18 chr13 34193335 34193446 -86090866 + L1MC4 LINE L1 7781 7892 -150 3 845 356 73 0 35 chr13 34193460 34193517 -86090795 + (CACG)n Simple_repeat Simple_repeat 1 55 0 3 845 534 250 58 19 chr13 34194046 34194201 -86090111 - RSINE1 SINE B4 -2 163 3 3 845 328 284 20 72 chr13 34194421 34194573 -86089739 - RLTR11A2 LTR ERVK -26 427 284 3 845 21 0 0 0 chr13 34194586 34194607 -86089705 + AT_rich Low_complexity Low_complexity 1 21 0 3 845 813 301 42 4 chr13 34194607 34194847 -86089465 - RMER5 LTR ERV1 -28 506 258 3 845 362 248 99 33 chr13 34195950 34196071 -86088241 - RLTR11A2 LTR ERVK -398 129 1 3 845 509 274 43 43 chr13 34196419 34196583 -86087729 - RSINE1 SINE B4 0 165 2 3 845 461 269 9 9 chr13 34196621 34196737 -86087575 - PB1D10 SINE Alu -1 116 1 3 845 21 0 0 0 chr13 34196740 34196761 -86087551 + AT_rich Low_complexity Low_complexity 1 21 0 3 845 723 208 23 0 chr13 34196792 34196922 -86087390 - RSINE1 SINE B4 -31 134 2 3 845 426 298 123 20 chr13 34197204 34197399 -86086913 - ID_B1 SINE B4 -9 215 1 3 845 753 289 98 74 chr13 34198127 34198464 -86085848 + MLT2B3 LTR ERVL 1 345 -209 3 845 507 288 37 37 chr13 34198580 34198771 -86085541 - L1MA6 LINE L1 -287 6013 5823 3 845 225 384 20 31 chr13 34198892 34199088 -86085224 + L1MEf LINE L1 92 285 -6115 3 845 727 269 90 57 chr13 34199397 34199696 -86084616 - MER44A DNA MER2_type -11 328 20 3 845 366 264 122 87 chr13 34199829 34199899 -86084413 + L1MEf LINE L1 1929 1988 -4212 3 845 1214 48 7 0 chr13 34199899 34200045 -86084267 + B1_Mus1 SINE Alu 2 148 0 3 845 366 264 122 87 chr13 34200045 34200141 -86084171 + L1MEf LINE L1 1989 2104 -4096 3 845 439 250 118 6 chr13 34200141 34200302 -86084010 + B3A SINE B2 4 182 -16 3 845 366 264 122 87 chr13 34200302 34200387 -86083925 + L1MEf LINE L1 2105 2189 -4011 3 845 275 301 108 38 chr13 34200486 34200855 -86083457 + L1MEf LINE L1 1100 1494 -4921 3 845 231 363 70 0 chr13 34200938 34201109 -86083203 + L1MEf LINE L1 1662 1844 -4571 3 845 663 136 0 0 chr13 34201171 34201281 -86083031 + (CA)n Simple_repeat Simple_repeat 1 110 0 3 845 189 0 0 0 chr13 34201335 34201356 -86082956 + (CCA)n Simple_repeat Simple_repeat 1 21 0 3 845 557 248 14 7 chr13 34201921 34202063 -86082249 + MLT1A0 LTR MaLR 12 154 -211 3 845 226 265 107 10 chr13 34202059 34202162 -86082150 - MER46C DNA MER2_type -10 328 216 3 845 226 258 97 0 chr13 34202551 34202613 -86081699 + B3A SINE B2 12 79 -119 3 845 318 26 0 0 chr13 34202660 34202699 -86081613 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 845 276 324 18 18 chr13 34204066 34204176 -86080136 + MER5A1 DNA MER1_type 53 162 -4 3 845 366 297 0 43 chr13 34204596 34204712 -86079600 - MIR SINE MIR -88 174 64 3 845 228 302 16 0 chr13 34204788 34204851 -86079461 + MTEa LTR MaLR 1 64 -295 3 845 322 277 53 18 chr13 34204907 34205021 -86079291 + MTEa LTR MaLR 19 136 -243 3 845 268 342 36 54 chr13 34205055 34205222 -86079090 + MT2A LTR ERVL 194 357 -176 3 845 2685 153 60 13 chr13 34205222 34205743 -86078569 - RLTR28 LTR ERVL 0 524 1 3 845 1108 256 98 35 chr13 34206295 34206671 -86077641 + MTD LTR MaLR 5 404 -15 3 845 841 257 67 64 chr13 34206672 34207000 -86077312 + MTE2a LTR MaLR 51 379 0 3 845 926 261 62 13 chr13 34207002 34207227 -86077085 + B4A SINE B4 39 274 -18 3 845 276 30 0 0 chr13 34209123 34209156 -86075156 + (TTAA)n Simple_repeat Simple_repeat 2 34 0 3 845 557 143 0 146 chr13 34209161 34209284 -86075028 - PB1D9 SINE Alu -14 106 2 3 845 468 227 57 0 chr13 34209487 34209575 -86074737 + RSINE1 SINE B4 4 96 -69 3 845 253 193 21 83 chr13 34209498 34209594 -86074718 + BC1_Mm scRNA scRNA 14 103 -49 3 846 295 261 0 0 chr13 34209821 34209890 -86074422 + ID4_ SINE ID 2 70 -13 3 846 309 186 98 42 chr13 34209938 34210041 -86074271 - PB1D10 SINE Alu -1 119 13 3 846 252 0 0 0 chr13 34210311 34210339 -86073973 + (CAGA)n Simple_repeat Simple_repeat 4 31 0 3 846 277 283 28 28 chr13 34210479 34210588 -86073724 + L1MEg LINE L1 137 245 -6155 3 846 975 179 94 10 chr13 34210750 34210942 -86073370 + B3 SINE B2 2 209 -7 3 846 328 266 100 53 chr13 34210990 34211270 -86073042 + L1MEg LINE L1 1532 1856 -4559 3 846 1121 83 0 0 chr13 34211718 34211862 -86072450 + B1_Mus2 SINE Alu 2 145 -2 3 846 625 232 68 49 chr13 34211917 34212080 -86072232 + B4A SINE B4 1 166 -126 3 846 314 344 0 0 chr13 34212092 34212182 -86072130 + B4A SINE B4 201 290 -2 3 846 374 253 10 59 chr13 34212423 34212524 -86071788 + PB1D10 SINE Alu 14 109 -8 3 846 861 234 50 20 chr13 34212737 34212938 -86071374 - B3 SINE B2 -8 208 2 3 846 410 200 183 43 chr13 34213708 34213823 -86070489 + RMER30 DNA MER1_type 25 155 -47 3 846 200 161 0 0 chr13 34214203 34214234 -86070078 + L2c LINE L2 3340 3370 -17 3 846 188 229 0 0 chr13 34214204 34214239 -86070073 + MIR SINE MIR 222 256 -6 3 846 306 365 95 58 chr13 34214292 34214670 -86069642 - MLT1A1 LTR MaLR -12 396 5 3 846 225 0 0 0 chr13 34215100 34215125 -86069187 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 3 846 1520 292 62 37 chr13 34215519 34216000 -86068312 - MER21B LTR ERV1 -44 819 327 3 846 424 284 52 0 chr13 34216000 34216116 -86068196 - RMER15 LTR ERVL 0 575 454 3 846 314 74 0 18 chr13 34217302 34217357 -86066955 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 846 453 19 0 0 chr13 34218147 34218201 -86066111 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 846 373 238 0 36 chr13 34218565 34218648 -86065664 + ID4 SINE ID 2 81 -2 3 846 531 0 0 0 chr13 34221439 34221498 -86062814 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 846 293 167 171 26 chr13 34223974 34224086 -86060226 - MIR SINE MIR -85 191 58 3 846 276 30 0 0 chr13 34224605 34224638 -86059674 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 846 450 0 0 0 chr13 34224638 34224687 -86059625 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 846 321 123 0 0 chr13 34226047 34226112 -86058200 + (T)n Simple_repeat Simple_repeat 1 65 0 3 846 216 0 0 0 chr13 34226633 34226657 -86057655 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 3 846 1126 89 0 0 chr13 34226663 34226809 -86057503 - B1_Mus1 SINE Alu 0 148 3 3 846 590 182 36 0 chr13 34226918 34227028 -86057284 + RLTR11B LTR ERVK 1 114 -339 3 846 338 164 0 0 chr13 34227029 34227084 -86057228 - B2_Mm2 SINE B2 -43 152 98 3 846 2567 145 79 27 chr13 34227106 34227509 -86056803 + RLTR11A2 LTR ERVK 22 453 -74 3 846 189 0 0 0 chr13 34227509 34227530 -86056782 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 846 2567 145 79 27 chr13 34227530 34227607 -86056705 + RLTR11A2 LTR ERVK 454 526 -1 3 846 996 279 66 21 chr13 34227649 34228026 -86056286 + L1MB2 LINE L1 5655 6048 -123 3 846 475 314 17 34 chr13 34228060 34228235 -86056077 - MER2 DNA MER2_type -23 322 151 3 846 248 350 87 77 chr13 34230908 34231103 -86053209 + MLT1A LTR MaLR 1 197 -177 3 846 2748 52 14 123 chr13 34231173 34231611 -86052701 - RLTR10 LTR ERVK 0 390 1 3 846 8797 24 0 12 chr13 34231613 34232620 -86051692 - RLTR10-int LTR ERVK -3 1984 990 3 846 8055 32 2 70 chr13 34232699 34233759 -86050553 - RLTR10-int LTR ERVK -999 988 1 3 846 2832 47 7 148 chr13 34233759 34234213 -86050099 - RLTR10 LTR ERVK 0 390 1 3 846 234 316 10 40 chr13 34234218 34234317 -86049995 + MLT1A LTR MaLR 307 402 -6 3 846 197 340 146 9 chr13 34234451 34234561 -86049751 - L2a LINE L2 -4 3422 3298 3 846 210 37 0 0 chr13 34234832 34234859 -86049453 + (CCCCAA)n Simple_repeat Simple_repeat 3 29 0 3 846 545 261 0 0 chr13 34235066 34235181 -86049131 + PB1D10 SINE Alu 1 115 -2 3 846 242 91 0 0 chr13 34235594 34235627 -86048685 - MTD LTR MaLR -385 34 2 3 846 594 216 147 18 chr13 34235627 34235780 -86048532 - MTD LTR MaLR -45 374 200 3 846 440 205 72 16 chr13 34235796 34235924 -86048388 - B3 SINE B2 0 216 2 3 846 969 191 87 5 chr13 34235924 34236118 -86048194 - MTD LTR MaLR -209 210 1 3 846 261 0 0 0 chr13 34236197 34236226 -86048086 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 846 890 174 0 26 chr13 34236576 34236729 -86047583 - B1_Mur1 SINE Alu 0 149 1 4 846 180 0 0 0 chr13 34236967 34236987 -86047325 + (A)n Simple_repeat Simple_repeat 1 20 0 4 846 755 76 236 25 chr13 34237172 34237333 -86046979 - B2_Mm2 SINE B2 0 195 1 4 846 2134 87 23 3 chr13 34237346 34237646 -86046666 - L1_Mus3 LINE L1 0 6638 6333 4 846 465 246 102 22 chr13 34237837 34237974 -86046338 - MLT1A1 LTR MaLR 0 408 261 4 846 538 303 28 14 chr13 34238207 34238351 -86045961 + RSINE1 SINE B4 18 163 -2 4 846 234 0 0 0 chr13 34238370 34238396 -86045916 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 846 898 167 0 20 chr13 34239135 34239288 -86045024 - B1_Mur4 SINE Alu 0 150 1 4 846 643 260 91 10 chr13 34239306 34239504 -86044808 - B3 SINE B2 0 216 3 4 846 467 214 2 7 chr13 34239786 34239899 -86044413 - L1MB3 LINE L1 -393 5919 5811 4 846 245 303 15 0 chr13 34240670 34240736 -86043576 + L2b LINE L2 3304 3370 -5 4 846 385 271 77 21 chr13 34241469 34241612 -86042700 - RMER15 LTR ERVL -17 558 408 4 846 260 302 7 85 chr13 34241686 34241827 -86042485 - Lx8 LINE L1 -312 7161 7032 4 846 474 18 0 0 chr13 34242906 34242961 -86041351 + (TATG)n Simple_repeat Simple_repeat 2 56 0 4 846 1020 83 0 40 chr13 34242961 34243104 -86041208 - B1_Mm SINE Alu -8 139 3 4 846 306 0 0 0 chr13 34243165 34243199 -86041113 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 846 447 285 57 8 chr13 34243204 34243328 -86040984 - B1F1 SINE Alu -19 130 1 4 846 327 324 33 76 chr13 34243328 34243512 -86040800 + Tigger5 DNA MER2_type 93 268 -2138 4 846 314 323 10 10 chr13 34243666 34243763 -86040549 + MTEa LTR MaLR 283 379 0 4 846 369 0 0 0 chr13 34243847 34243888 -86040424 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 846 389 255 18 9 chr13 34244253 34244364 -86039948 + PB1D10 SINE Alu 6 117 0 4 846 620 242 0 16 chr13 34244381 34244503 -86039809 + B1_Mur3 SINE Alu 6 125 -24 4 846 402 39 0 0 chr13 34244507 34244559 -86039753 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 846 313 95 0 0 chr13 34244559 34244601 -86039711 + HAL1-3A_ME LINE L1 1976 2017 -841 4 846 210 150 0 0 chr13 34245103 34245143 -86039169 + (C)n Simple_repeat Simple_repeat 1 40 0 4 846 1071 61 8 0 chr13 34245145 34245276 -86039036 - B1_Mus1 SINE Alu -16 132 1 4 846 235 336 46 33 chr13 34245336 34245487 -86038825 - L2 LINE L2 -1720 1699 1547 4 846 245 186 119 0 chr13 34245670 34245729 -86038583 - ID4_ SINE ID -17 66 1 4 846 193 291 41 98 chr13 34246066 34246188 -86038124 - L3 LINE CR1 -580 3909 3795 4 846 719 60 20 0 chr13 34246786 34246886 -86037426 + (TTTC)n Simple_repeat Simple_repeat 4 105 0 4 846 223 310 171 34 chr13 34247011 34247128 -86037184 - MIR3 SINE MIR -30 178 46 4 846 492 254 213 14 chr13 34247879 34248134 -86036178 - MTD LTR MaLR 0 419 64 4 846 908 165 95 48 chr13 34248136 34248346 -86035966 + ORR1B2 LTR MaLR 1 220 -147 4 846 769 238 70 30 chr13 34248355 34248585 -86035727 + RLTR16 LTR ERVK 257 495 -10 4 846 685 272 93 37 chr13 34249210 34249424 -86034888 - B4A SINE B4 -63 229 4 4 846 374 308 85 0 chr13 34249729 34249876 -86034436 + MER47B DNA MER2_type 4 162 -256 4 846 1388 162 184 0 chr13 34249989 34250298 -86034014 - ORR1D1 LTR MaLR -5 369 4 4 846 406 227 41 91 chr13 34250458 34250579 -86033733 - PB1D9 SINE Alu -5 115 1 4 846 568 219 74 25 chr13 34250605 34250727 -86033585 - B1F SINE Alu 0 149 22 4 846 905 241 56 0 chr13 34250782 34250977 -86033335 - B3 SINE B2 -6 210 5 4 846 696 284 93 15 chr13 34250982 34251325 -86032987 - L1MD LINE L1 -820 5326 4957 4 846 389 309 6 45 chr13 34251327 34251483 -86032829 + L1ME1 LINE L1 5404 5553 -620 4 846 243 150 0 0 chr13 34251495 34251555 -86032757 + (GGGAGA)n Simple_repeat Simple_repeat 3 62 0 4 846 233 198 112 56 chr13 34251555 34251593 -86032719 + RLTR25B LTR ERVK 397 474 -554 4 846 271 106 0 130 chr13 34251593 34251647 -86032665 + 4.5SRNA scRNA scRNA 40 86 -8 4 846 656 83 0 50 chr13 34251599 34251700 -86032612 + B1_Mus2 SINE Alu 42 137 -10 4 846 233 198 112 56 chr13 34251647 34251662 -86032650 + RLTR25B LTR ERVK 475 509 -519 4 846 587 281 87 47 chr13 34251736 34251886 -86032426 + L1ME1 LINE L1 5559 5714 -465 4 846 2647 97 91 34 chr13 34251886 34252293 -86032019 + RLTR23 LTR ERV1 1 430 0 4 846 587 281 87 47 chr13 34252293 34252545 -86031767 + L1ME1 LINE L1 5715 5977 -202 4 846 24 32 0 0 chr13 34252639 34252670 -86031642 + AT_rich Low_complexity Low_complexity 1 31 0 4 846 857 104 15 0 chr13 34252684 34252818 -86031494 + (TTTC)n Simple_repeat Simple_repeat 3 138 0 4 846 1123 59 0 0 chr13 34252820 34252955 -86031357 - B1_Mus1 SINE Alu -12 136 2 4 846 1838 229 48 11 chr13 34253385 34253862 -86030450 + RLTR11A2 LTR ERVK 19 513 -14 4 846 231 307 83 23 chr13 34254374 34254525 -86029787 - MIRb SINE MIR -107 155 2 4 846 327 309 0 0 chr13 34255724 34255802 -86028510 - BC1_Mm scRNA scRNA -73 79 2 4 846 251 307 53 0 chr13 34255797 34255872 -86028440 - MLT1C LTR MaLR -277 190 112 4 846 193 139 0 122 chr13 34255966 34256015 -86028297 + L2 LINE L2 2806 2848 -571 4 846 351 167 0 48 chr13 34257127 34257190 -86027122 - ID4_ SINE ID 0 83 24 4 846 1226 54 0 0 chr13 34257511 34257658 -86026654 - B1_Mus2 SINE Alu 0 147 1 4 846 3195 14 0 39 chr13 34258642 34259024 -86025288 - IAPLTR1_Mm LTR ERVK 0 367 1 4 846 56566 23 14 13 chr13 34259024 34265491 -86018821 - IAPEz-int LTR ERVK 0 6481 8 4 846 3195 14 0 39 chr13 34265491 34265873 -86018439 - IAPLTR1_Mm LTR ERVK 0 367 1 4 846 256 328 9 9 chr13 34266344 34266458 -86017854 - L1MC4 LINE L1 -112 7930 7817 4 846 382 310 148 11 chr13 34266634 34266823 -86017489 - B3 SINE B2 -1 215 1 4 846 319 273 13 0 chr13 34266828 34266905 -86017407 - 4.5SRNA scRNA scRNA -8 86 9 4 846 293 301 10 70 chr13 34267188 34267288 -86017024 + B1F2 SINE Alu 1 94 -55 4 846 830 171 200 16 chr13 34267493 34267683 -86016629 - URR1B DNA MER1_type 0 225 1 4 846 255 330 0 69 chr13 34268058 34268159 -86016153 - B1F2 SINE Alu -55 94 1 4 846 267 103 0 0 chr13 34268204 34268243 -86016069 + (A)n Simple_repeat Simple_repeat 1 39 0 4 846 827 190 7 0 chr13 34268247 34268389 -86015923 + B1_Mus2 SINE Alu 3 145 -2 4 846 1129 95 0 0 chr13 34268610 34268757 -86015555 - B1_Mus1 SINE Alu 0 148 2 4 846 258 291 65 82 chr13 34269262 34269494 -86014818 - Charlie7 DNA MER1_type -3 2609 2382 4 846 203 263 70 0 chr13 34270446 34270503 -86013809 + MIRb SINE MIR 117 177 -91 4 846 298 297 95 87 chr13 34275345 34275631 -86008681 + MLT1A1 LTR MaLR 59 364 -44 4 846 300 304 221 41 chr13 34276122 34276496 -86007816 + L1ME1 LINE L1 4818 5258 -888 4 846 762 233 263 9 chr13 34276545 34276977 -86007335 + L1ME1 LINE L1 5478 6027 -152 4 846 236 315 131 73 chr13 34277569 34277706 -86006606 + MLT1E LTR MaLR 31 175 -385 4 846 299 311 326 14 chr13 34277685 34277900 -86006412 + MLT1E LTR MaLR 300 581 -72 4 846 210 304 13 104 chr13 34279030 34279107 -86005205 + B4 SINE B4 75 144 -148 4 846 347 198 111 0 chr13 34279057 34279138 -86005174 + B1F1 SINE Alu 9 98 -51 4 846 22 0 0 0 chr13 34279909 34279931 -86004381 + AT_rich Low_complexity Low_complexity 1 22 0 4 846 475 259 183 11 chr13 34279936 34280127 -86004185 - MER2 DNA MER2_type -27 318 95 4 846 319 264 0 89 chr13 34280141 34280220 -86004092 - tRNA-Ala-GCY_ tRNA tRNA -1 74 3 4 846 1223 148 114 0 chr13 34280917 34281119 -86003193 - URR1A DNA MER1_type -1 225 1 4 846 2689 152 2 2 chr13 34281222 34281630 -86002682 + MTC LTR MaLR 1 408 -13 4 846 476 235 191 0 chr13 34283444 34283559 -86000753 - ID_B1 SINE B4 -86 138 2 4 846 311 190 52 50 chr13 34283564 34283654 -86000658 - PB1D10 SINE Alu -5 112 18 4 846 468 330 62 90 chr13 34286678 34287034 -85997278 + ORR1E LTR MaLR 3 348 -11 4 846 210 71 0 0 chr13 34288305 34288333 -85995979 + (TTCC)n Simple_repeat Simple_repeat 2 29 0 4 846 393 22 0 0 chr13 34290267 34290313 -85993999 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 846 226 204 222 0 chr13 34290355 34290409 -85993903 + tRNA-Ala-GCY_ tRNA tRNA 2 67 -8 4 846 628 297 81 22 chr13 34290778 34291098 -85993214 + L1MD3 LINE L1 7657 7995 0 4 846 180 0 0 0 chr13 34291229 34291249 -85993063 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 846 318 222 0 0 chr13 34291886 34291949 -85992363 + MER44D DNA MER2_type 53 115 -590 4 846 609 256 34 34 chr13 34291940 34292118 -85992194 + MER44D DNA MER2_type 501 678 -27 4 846 210 37 0 0 chr13 34292220 34292247 -85992065 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 846 414 57 0 0 chr13 34293559 34293612 -85990700 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 846 353 315 33 47 chr13 34294091 34294241 -85990071 + MIR SINE MIR 37 184 -78 4 846 224 246 18 0 chr13 34295980 34296037 -85988275 + GA-rich Low_complexity Low_complexity 5 62 0 4 846 205 281 90 39 chr13 34296251 34296382 -85987930 - MIR SINE MIR -99 177 49 4 846 564 228 88 7 chr13 34296652 34296789 -85987523 + B1F SINE Alu 1 148 -1 4 846 612 214 56 49 chr13 34297442 34297604 -85986708 + RSINE1 SINE B4 3 165 0 4 846 499 280 50 30 chr13 34297675 34297874 -85986438 - B3 SINE B2 -12 204 2 4 846 374 228 11 0 chr13 34298082 34298192 -85986120 - B1F SINE Alu -5 115 5 4 846 577 247 116 23 chr13 34299506 34299837 -85984475 - L1MA4 LINE L1 -362 5938 5501 4 846 1088 189 41 59 chr13 34300469 34300688 -85983624 + B3 SINE B2 1 215 -1 4 846 208 261 40 68 chr13 34300850 34300924 -85983388 + MIRm SINE MIR 91 162 -114 5 846 432 331 28 7 chr13 34301484 34301627 -85982685 + B1F SINE Alu 4 149 0 5 846 239 275 14 28 chr13 34301633 34301704 -85982608 + ID4_ SINE ID 1 70 -13 5 846 458 226 185 33 chr13 34302939 34303090 -85981222 - B2_Mm2 SINE B2 -7 188 15 5 846 612 0 0 0 chr13 34303105 34303173 -85981139 + (TTTTC)n Simple_repeat Simple_repeat 2 69 0 5 846 714 210 14 7 chr13 34303216 34303360 -85980952 - B1_Mur3 SINE Alu 0 149 5 5 846 191 306 69 30 chr13 34303946 34304047 -85980265 + MIR SINE MIR 110 214 -48 5 846 517 228 129 0 chr13 34304075 34304176 -85980136 + PB1 SINE Alu 7 120 -7 5 846 189 0 0 0 chr13 34304178 34304199 -85980113 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 5 846 655 322 63 60 chr13 34305393 34305677 -85978635 - B4A SINE B4 -7 285 1 5 846 1153 301 101 40 chr13 34307210 34307736 -85976576 + MER74A LTR ERVL 1 558 0 5 846 640 170 9 0 chr13 34308076 34308182 -85976130 + MTC LTR MaLR 1 107 -314 5 846 1185 156 27 0 chr13 34308180 34308366 -85975946 + MTC LTR MaLR 229 419 -2 5 846 4045 182 66 28 chr13 34308371 34309321 -85974991 + MTC-int LTR MaLR 2 1088 -170 5 846 342 289 52 7 chr13 34309309 34309445 -85974867 - B2_Mm2 SINE B2 -7 188 47 5 846 1215 90 18 6 chr13 34309505 34309673 -85974639 - B2_Mm1t SINE B2 -22 171 2 5 846 487 128 221 35 chr13 34309673 34309742 -85974570 + MTC-int LTR MaLR 1087 1154 -104 5 846 1380 96 5 0 chr13 34309742 34309930 -85974382 - B2_Mm1a SINE B2 -1 192 4 5 846 487 128 221 35 chr13 34309930 34310005 -85974307 + MTC-int LTR MaLR 1155 1257 -1 5 846 2315 132 110 0 chr13 34310005 34310377 -85973935 + MTC LTR MaLR 1 413 -8 5 846 277 302 149 113 chr13 34310975 34311363 -85972949 - MLT1A1 LTR MaLR -4 404 3 5 846 306 307 19 29 chr13 34311370 34311474 -85972838 + ORR1D2 LTR MaLR 8 110 -260 5 846 32 75 0 0 chr13 34312056 34312123 -85972189 + AT_rich Low_complexity Low_complexity 1 67 0 5 846 256 315 162 22 chr13 34312151 34312336 -85971976 - MIRb SINE MIR -28 234 24 5 846 239 280 12 47 chr13 34312355 34312441 -85971871 - MIRb SINE MIR -73 195 113 5 846 237 33 0 0 chr13 34312492 34312522 -85971790 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 5 846 351 265 68 14 chr13 34312720 34312843 -85971469 - MTEa LTR MaLR 0 379 255 5 846 207 0 0 0 chr13 34312880 34312903 -85971409 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 846 231 270 38 63 chr13 34312945 34313024 -85971288 - Cheshire DNA MER1_type -2170 250 174 5 846 1215 69 0 0 chr13 34313302 34313549 -85970763 + (CA)n Simple_repeat Simple_repeat 1 247 0 5 846 234 56 71 36 chr13 34313565 34313621 -85970691 + (CAGAGA)n Simple_repeat Simple_repeat 2 59 0 5 846 216 0 0 0 chr13 34314106 34314130 -85970182 + (CTG)n Simple_repeat Simple_repeat 1 24 0 5 846 347 109 36 0 chr13 34314642 34314697 -85969615 + HAL1-3A_ME LINE L1 1962 2018 -840 5 846 223 255 0 0 chr13 34314697 34314744 -85969568 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 846 1376 144 23 14 chr13 34315801 34316019 -85968293 - URR1B DNA MER1_type -2 223 4 5 846 343 340 68 20 chr13 34316055 34316202 -85968110 - RSINE1 SINE B4 -5 160 7 5 846 293 347 20 0 chr13 34316263 34316361 -85967951 + Tigger7 DNA MER2_type 181 280 -2211 5 846 261 0 0 0 chr13 34316371 34316400 -85967912 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 846 293 310 88 40 chr13 34316400 34316576 -85967736 + Tigger7 DNA MER2_type 105 316 -2175 5 846 666 333 70 10 chr13 34316585 34316885 -85967427 + Tigger7 DNA MER2_type 156 473 -2018 5 846 247 236 125 0 chr13 34317976 34318048 -85966264 + ID4 SINE ID 1 81 -2 5 846 706 255 194 46 chr13 34318215 34318478 -85965834 + MTEa LTR MaLR 78 379 0 5 846 503 201 0 58 chr13 34318745 34318935 -85965377 + G-rich Low_complexity Low_complexity 2 180 0 5 846 327 49 0 0 chr13 34319218 34319259 -85965053 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 846 236 228 11 112 chr13 34319869 34319958 -85964354 - ID4 SINE ID -1 82 3 5 846 672 13 0 0 chr13 34320615 34320692 -85963620 + (GGGAGA)n Simple_repeat Simple_repeat 3 79 0 5 846 262 43 64 0 chr13 34320692 34320739 -85963573 + (CAGAGA)n Simple_repeat Simple_repeat 6 55 0 5 846 855 129 13 45 chr13 34321084 34321238 -85963074 - URR1A DNA MER1_type 0 226 78 5 846 235 284 122 47 chr13 34321895 34322002 -85962310 - MIR SINE MIR -58 210 96 5 846 199 326 87 0 chr13 34322081 34322173 -85962139 + L2a LINE L2 3302 3401 -25 5 846 576 29 0 0 chr13 34322181 34322251 -85962061 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 846 261 200 100 62 chr13 34322253 34322333 -85961979 - B2_Mm2 SINE B2 -14 181 99 5 846 25 31 0 0 chr13 34322372 34322404 -85961908 + AT_rich Low_complexity Low_complexity 1 32 0 5 846 971 126 55 25 chr13 34322406 34322569 -85961743 - B2_Mm2 SINE B2 -26 169 2 5 846 21 0 0 0 chr13 34322648 34322669 -85961643 + AT_rich Low_complexity Low_complexity 1 21 0 5 846 978 237 33 19 chr13 34322669 34322880 -85961432 - B3 SINE B2 0 216 3 5 846 327 148 0 36 chr13 34322905 34322961 -85961351 - PB1D10 SINE Alu -8 109 56 5 846 837 239 196 4 chr13 34322947 34323228 -85961084 - MTD LTR MaLR -32 387 53 5 846 189 0 0 0 chr13 34324098 34324119 -85960193 + (TTA)n Simple_repeat Simple_repeat 1 21 0 5 846 405 254 173 0 chr13 34324213 34324323 -85959989 - RSINE1 SINE B4 -16 149 21 5 846 555 311 10 35 chr13 34324487 34324690 -85959622 + B3A SINE B2 1 198 0 5 846 357 284 78 69 chr13 34324715 34324817 -85959495 + B3 SINE B2 37 139 -77 5 846 415 265 129 42 chr13 34325302 34325542 -85958770 + L2 LINE L2 2788 3048 -371 5 846 212 314 0 0 chr13 34325885 34325936 -85958376 - MER5A DNA MER1_type -95 94 44 5 846 183 250 23 0 chr13 34326501 34326545 -85957767 - MIR3 SINE MIR -54 154 110 5 846 256 273 38 25 chr13 34327316 34327395 -85956917 + MIR SINE MIR 46 125 -83 5 846 367 282 0 2 chr13 34328415 34328513 -85955799 - ID4 SINE ID -51 101 5 5 846 487 243 90 0 chr13 34328532 34328643 -85955669 - ID_B1 SINE B4 -16 208 88 5 846 246 179 0 0 chr13 34328647 34328703 -85955609 + CT-rich Low_complexity Low_complexity 3 58 0 5 846 524 266 64 0 chr13 34328793 34328902 -85955410 + RSINE1 SINE B4 50 165 0 5 846 1219 110 27 16 chr13 34328989 34329174 -85955138 - B2_Mm2 SINE B2 -7 188 2 5 846 347 297 20 10 chr13 34329711 34329813 -85954499 + B4A SINE B4 184 286 -6 5 846 306 0 0 0 chr13 34329876 34329910 -85954402 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 846 231 274 121 15 chr13 34330032 34330141 -85954171 + MIRc SINE MIR 2 114 -154 5 846 2948 133 0 7 chr13 34331960 34332384 -85951928 + MTC LTR MaLR 1 421 0 5 846 428 292 137 40 chr13 34332744 34332803 -85951509 + B3A SINE B2 5 80 -118 5 846 180 0 0 0 chr13 34332803 34332823 -85951489 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 846 428 292 137 40 chr13 34332823 34332938 -85951374 + B3A SINE B2 81 196 -2 5 846 348 229 133 0 chr13 34334598 34334703 -85949609 - MER3 DNA MER1_type 0 209 91 5 846 242 269 147 21 chr13 34334917 34335012 -85949300 - MLT1A1 LTR MaLR -11 397 291 5 846 1276 239 24 10 chr13 34335370 34335658 -85948654 - B4A SINE B4 0 292 1 5 846 459 0 0 0 chr13 34338608 34338659 -85945653 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 846 227 321 43 52 chr13 34340094 34340209 -85944103 + MER58B DNA MER1_type 138 251 -90 5 847 672 200 176 0 chr13 34341835 34342005 -85942307 - URR1B DNA MER1_type -25 200 1 5 847 270 0 0 0 chr13 34342169 34342199 -85942113 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 847 423 87 0 0 chr13 34342901 34342970 -85941342 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 847 815 158 0 57 chr13 34342972 34343113 -85941199 - B1_Mus1 SINE Alu -14 134 2 5 847 210 128 0 0 chr13 34343219 34343258 -85941054 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 5 847 917 94 7 7 chr13 34344784 34344923 -85939389 - B2_Mm2 SINE B2 -56 139 1 5 847 394 258 0 0 chr13 34345408 34345497 -85938815 + B1F SINE Alu 6 94 -55 5 847 658 233 69 57 chr13 34346132 34346291 -85938021 + RSINE1 SINE B4 5 165 0 5 847 1137 301 44 44 chr13 34348294 34348882 -85935430 + L1MB1 LINE L1 5567 6154 -14 5 847 395 302 0 41 chr13 34349430 34349551 -85934761 - RSINE1 SINE B4 -2 163 48 5 847 414 57 0 0 chr13 34350994 34351047 -85933265 + (TTG)n Simple_repeat Simple_repeat 2 54 0 5 847 228 233 0 0 chr13 34351586 34351629 -85932683 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 847 477 0 0 0 chr13 34351630 34351683 -85932629 + (TCTG)n Simple_repeat Simple_repeat 4 56 0 5 847 285 311 22 0 chr13 34352207 34352297 -85932015 - MIR SINE MIR -63 145 54 5 847 24 32 0 0 chr13 34353679 34353710 -85930602 + AT_rich Low_complexity Low_complexity 1 31 0 5 847 741 179 48 4 chr13 34354061 34354249 -85930063 + B3 SINE B2 1 198 0 5 847 830 172 10 97 chr13 34354279 34354485 -85929827 + B2_Mm2 SINE B2 6 193 -2 5 847 8122 67 20 1 chr13 34354599 34356319 -85927993 - L1_Mus1 LINE L1 0 6567 4806 5 847 288 0 0 0 chr13 34356449 34356481 -85927831 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 847 297 222 28 0 chr13 34356483 34356555 -85927757 - ID SINE ID -149 75 2 5 847 444 237 0 49 chr13 34356558 34356660 -85927652 - PB1D10 SINE Alu 0 117 21 5 847 557 332 70 11 chr13 34357742 34358013 -85926299 - MER58B DNA MER1_type -1 340 54 5 847 1200 291 94 18 chr13 34358957 34359457 -85924855 + MER68 LTR ERVL 26 563 0 5 847 521 140 50 0 chr13 34360544 34360644 -85923668 - ORR1D2 LTR MaLR 0 370 266 5 847 254 219 229 12 chr13 34360637 34360720 -85923592 - ORR1D2 LTR MaLR -269 101 1 5 847 393 22 0 0 chr13 34361566 34361612 -85922700 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 847 22 0 0 0 chr13 34364454 34364476 -85919836 + AT_rich Low_complexity Low_complexity 1 22 0 6 847 203 171 26 26 chr13 34364533 34364611 -85919701 + GA-rich Low_complexity Low_complexity 2 79 0 6 847 409 313 100 25 chr13 34365293 34365493 -85918819 - MLT1I LTR MaLR 0 411 197 6 847 468 305 103 21 chr13 34367126 34367320 -85916992 + MER58A DNA MER1_type 12 221 -3 6 847 309 304 72 124 chr13 34367837 34368123 -85916189 + ORR1E LTR MaLR 43 309 -75 6 847 609 198 135 0 chr13 34368123 34368249 -85916063 - B1_Mur2 SINE Alu -6 143 1 6 847 277 215 31 18 chr13 34368249 34368318 -85915994 + ORR1E LTR MaLR 290 369 -15 6 847 576 248 162 29 chr13 34368918 34369122 -85915190 - 7SK RNA RNA -95 236 6 6 847 501 257 62 0 chr13 34369117 34369230 -85915082 - ID_B1 SINE B4 -21 203 84 6 847 589 251 82 0 chr13 34369529 34369712 -85914600 + L1MB3 LINE L1 5614 5811 -360 6 847 523 129 200 46 chr13 34369804 34369906 -85914406 + B1_Mur4 SINE Alu 1 124 -26 6 847 258 32 0 0 chr13 34369906 34369937 -85914375 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 847 523 129 200 46 chr13 34369937 34369964 -85914348 + B1_Mur4 SINE Alu 125 150 0 6 847 262 0 53 0 chr13 34369975 34370013 -85914299 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 6 847 226 317 70 7 chr13 34370013 34370156 -85914156 + L1MB3 LINE L1 5958 6109 -74 6 847 604 219 64 28 chr13 34371482 34371623 -85912689 + B1_Mur1 SINE Alu 3 148 -1 6 847 369 0 0 0 chr13 34372382 34372423 -85911889 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 6 847 254 340 78 7 chr13 34374282 34374424 -85909888 - MER3 DNA MER1_type -53 156 5 6 847 2131 17 0 0 chr13 34374457 34374693 -85909619 + L1Md_T LINE L1 5351 5586 -297 6 847 8152 57 0 0 chr13 34374693 34375717 -85908595 + L1Md_T LINE L1 5587 6582 0 6 847 266 294 29 29 chr13 34375800 34375905 -85908407 + MLT1A1 LTR MaLR 1 105 -303 6 847 236 247 101 101 chr13 34376894 34376993 -85907319 + B2_Mm2 SINE B2 2 100 -95 6 847 375 78 0 0 chr13 34377015 34377066 -85907246 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 847 259 243 13 103 chr13 34377549 34377627 -85906685 - PB1D10 SINE Alu -35 82 12 6 847 230 116 0 23 chr13 34377815 34377859 -85906453 + (CAAAAA)n Simple_repeat Simple_repeat 4 46 0 6 847 188 283 172 16 chr13 34378619 34378741 -85905571 + MIR SINE MIR 10 150 -112 6 847 316 287 46 0 chr13 34380741 34380849 -85903463 + PB1D7 SINE Alu 1 113 -7 6 847 357 116 0 0 chr13 34380856 34380925 -85903387 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 847 254 342 0 50 chr13 34380950 34381013 -85903299 + ID4 SINE ID 1 62 -21 6 847 189 0 0 0 chr13 34381013 34381034 -85903278 + (CACCC)n Simple_repeat Simple_repeat 1 21 0 6 847 254 342 0 50 chr13 34381034 34381050 -85903262 + ID4 SINE ID 63 76 -7 6 847 378 0 0 0 chr13 34381050 34381092 -85903220 + (TAAAA)n Simple_repeat Simple_repeat 3 44 0 6 847 315 0 0 0 chr13 34381299 34381334 -85902978 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 847 351 0 0 0 chr13 34381375 34381414 -85902898 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 847 180 0 0 0 chr13 34382138 34382158 -85902154 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 847 402 74 0 0 chr13 34383858 34383912 -85900400 + (TCCTG)n Simple_repeat Simple_repeat 4 57 0 6 847 447 271 155 0 chr13 34385073 34385202 -85899110 - B1F SINE Alu 0 149 1 6 847 378 0 0 0 chr13 34385353 34385395 -85898917 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 847 494 309 116 11 chr13 34385409 34385599 -85898713 - B4A SINE B4 0 292 83 6 847 434 271 57 83 chr13 34385610 34385632 -85898680 - B3 SINE B2 -27 189 167 6 847 414 0 0 0 chr13 34385632 34385678 -85898634 + (TC)n Simple_repeat Simple_repeat 2 47 0 6 847 363 23 0 0 chr13 34385678 34385721 -85898591 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 847 447 248 72 58 chr13 34385721 34385890 -85898422 - B3A SINE B2 -50 166 2 6 847 212 306 0 0 chr13 34385890 34385936 -85898376 - B4A SINE B4 -208 84 39 6 847 332 157 131 12 chr13 34386992 34387076 -85897236 + Lx9 LINE L1 7398 7491 -153 6 847 434 0 0 0 chr13 34387195 34387248 -85897064 + L1Md_F3 LINE L1 6518 6570 -14 6 847 280 329 0 0 chr13 34387290 34387369 -85896943 + ID4_ SINE ID 2 80 -3 6 847 207 0 0 0 chr13 34387370 34387393 -85896919 + (CAAG)n Simple_repeat Simple_repeat 1 23 0 6 847 404 304 8 34 chr13 34387512 34387631 -85896681 - PB1 SINE Alu 0 127 12 6 847 983 124 0 33 chr13 34388271 34388421 -85895891 - B1_Mus1 SINE Alu 0 148 4 6 847 207 0 0 0 chr13 34389248 34389271 -85895041 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 847 745 287 5 10 chr13 34389280 34389477 -85894835 - B3A SINE B2 0 198 3 6 847 639 281 9 112 chr13 34389674 34389898 -85894414 + MER58A DNA MER1_type 9 209 -15 6 847 322 291 120 54 chr13 34392005 34392172 -85892140 + L1MB8 LINE L1 5950 6127 -51 6 847 261 0 0 0 chr13 34392182 34392211 -85892101 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 847 248 190 19 90 chr13 34392279 34392435 -85891877 + (TATAA)n Simple_repeat Simple_repeat 1 145 0 6 847 301 202 6 70 chr13 34392527 34392617 -85891695 - B1F1 SINE Alu -14 135 52 6 847 202 261 4 98 chr13 34392843 34392926 -85891386 + MIR SINE MIR 38 120 -156 6 847 830 259 136 3 chr13 34393213 34393462 -85890850 + MLT1D LTR MaLR 244 504 -1 6 847 928 313 32 14 chr13 34393907 34393996 -85890316 - B4A SINE B4 -5 287 199 6 847 2643 151 12 0 chr13 34393996 34394408 -85889904 - MTC LTR MaLR 0 421 5 6 847 928 313 32 14 chr13 34394408 34394600 -85889712 - B4A SINE B4 -94 198 1 6 847 474 33 0 0 chr13 34395602 34395662 -85888650 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 847 378 0 0 0 chr13 34395721 34395763 -85888549 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 847 286 346 85 16 chr13 34395958 34396146 -85888166 + MIRb SINE MIR 66 266 -2 6 847 360 127 0 0 chr13 34396203 34396258 -85888054 - B3A SINE B2 -142 56 2 6 847 325 226 168 9 chr13 34396580 34396687 -85887625 - PB1 SINE Alu -3 124 1 6 847 484 278 109 82 chr13 34397792 34398059 -85886253 + B4 SINE B4 1 274 -18 6 847 282 227 0 0 chr13 34398137 34398212 -85886100 + GA-rich Low_complexity Low_complexity 2 76 0 6 847 303 28 0 0 chr13 34398260 34398296 -85886016 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 847 213 39 0 0 chr13 34400507 34400533 -85883779 + (A)n Simple_repeat Simple_repeat 1 26 0 6 847 27 0 0 0 chr13 34400721 34400748 -85883564 + AT_rich Low_complexity Low_complexity 1 27 0 6 847 833 251 31 0 chr13 34402114 34402309 -85882003 + B3 SINE B2 1 201 -15 6 847 262 155 69 0 chr13 34402310 34402368 -85881944 + B3 SINE B2 153 214 -2 6 847 402 121 0 0 chr13 34402655 34402721 -85881591 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 847 297 271 43 0 chr13 34403172 34403242 -85881070 + RSINE1 SINE B4 39 111 -54 6 847 333 0 0 0 chr13 34403268 34403305 -85881007 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 847 306 0 0 0 chr13 34403428 34403462 -85880850 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 847 270 0 0 0 chr13 34403462 34403491 -85880821 + (GA)n Simple_repeat Simple_repeat 1 30 0 6 847 755 271 90 0 chr13 34403551 34403739 -85880573 + ID_B1 SINE B4 1 205 -19 6 847 245 131 32 32 chr13 34403774 34403837 -85880475 + T-rich Low_complexity Low_complexity 2 64 0 6 847 1170 89 0 0 chr13 34403840 34403986 -85880326 - B1_Mus1 SINE Alu 0 148 3 6 847 347 305 34 45 chr13 34404021 34404158 -85880154 + PB1 SINE Alu 11 133 -16 6 847 517 227 18 0 chr13 34404159 34404269 -85880043 + PB1D9 SINE Alu 1 112 -8 6 847 997 225 5 5 chr13 34404280 34404490 -85879822 + B3 SINE B2 1 210 -6 6 847 188 67 0 32 chr13 34405587 34405618 -85878694 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 6 847 321 200 66 13 chr13 34406843 34406919 -85877393 + ID4_ SINE ID 1 80 -3 6 847 304 307 94 26 chr13 34407119 34407236 -85877076 + L2c LINE L2 3160 3284 -103 6 847 337 353 45 59 chr13 34407238 34407440 -85876872 + MER58A DNA MER1_type 1 199 -25 6 847 1279 206 82 40 chr13 34407437 34407567 -85876745 + MTEb LTR MaLR 36 165 -214 6 847 396 0 0 0 chr13 34407567 34407611 -85876701 + (TAA)n Simple_repeat Simple_repeat 2 45 0 6 847 1279 206 82 40 chr13 34407611 34407809 -85876503 + MTEb LTR MaLR 166 377 -2 6 847 242 284 126 0 chr13 34407818 34407913 -85876399 - PB1D10 SINE Alu -1 116 10 6 847 22 0 0 0 chr13 34408077 34408099 -85876213 + AT_rich Low_complexity Low_complexity 1 22 0 6 847 1315 86 37 5 chr13 34409545 34409733 -85874579 - B2_Mm2 SINE B2 -1 194 1 6 847 243 319 126 56 chr13 34410067 34410210 -85874102 + RSINE1 SINE B4 12 164 -1 6 847 195 220 0 0 chr13 34410265 34410315 -85873997 + (TAG)n Simple_repeat Simple_repeat 1 50 0 6 847 270 0 0 0 chr13 34410491 34410521 -85873791 + (CAG)n Simple_repeat Simple_repeat 1 30 0 6 847 513 47 0 0 chr13 34410521 34410585 -85873727 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 847 294 281 0 0 chr13 34412698 34412755 -85871557 + tRNA-Ala-GCY_ tRNA tRNA 11 67 -8 6 847 742 204 51 0 chr13 34412821 34412958 -85871354 + B1_Mur1 SINE Alu 6 149 0 6 847 446 204 164 87 chr13 34413441 34413624 -85870688 + B3A SINE B2 2 198 0 6 847 201 39 0 0 chr13 34414030 34414056 -85870256 + (TTATA)n Simple_repeat Simple_repeat 5 30 0 6 847 2976 274 79 29 chr13 34415984 34417032 -85867280 + Lx8 LINE L1 6045 7222 -251 6 847 426 247 30 20 chr13 34417044 34417143 -85867169 + RMER15 LTR ERVL 371 470 -105 6 847 324 211 0 0 chr13 34417395 34417471 -85866841 + (TG)n Simple_repeat Simple_repeat 2 77 0 6 847 631 265 62 46 chr13 34417522 34417716 -85866596 - Tigger7 DNA MER2_type -24 2467 2271 6 847 684 297 91 0 chr13 34417726 34417958 -85866354 + MER2 DNA MER2_type 85 337 -8 6 847 241 318 59 89 chr13 34419633 34419778 -85864534 + RMER4B LTR ERVK 7 150 -435 6 847 225 0 0 0 chr13 34419778 34419803 -85864509 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 847 241 318 59 89 chr13 34419803 34419826 -85864486 + RMER4B LTR ERVK 151 170 -415 6 847 1084 211 47 49 chr13 34419905 34420249 -85864063 - RLTR15 LTR ERVK -16 343 1 7 847 1582 189 81 42 chr13 34420731 34421090 -85863222 + Lx9 LINE L1 6920 7292 -352 7 847 345 47 0 0 chr13 34421096 34421139 -85863173 + (CATA)n Simple_repeat Simple_repeat 2 44 0 7 847 234 234 78 0 chr13 34421305 34421369 -85862943 + ID4 SINE ID 1 69 -14 7 847 316 192 108 133 chr13 34421724 34421844 -85862468 - MER20 DNA MER1_type -75 144 28 7 847 551 292 59 51 chr13 34422679 34422721 -85861591 + MLT1B LTR MaLR 129 170 -220 7 847 244 272 12 12 chr13 34422721 34422803 -85861509 + ID4_ SINE ID 1 82 -1 7 847 551 292 59 51 chr13 34422803 34423016 -85861296 + MLT1B LTR MaLR 171 386 -4 7 847 726 301 85 24 chr13 34423959 34424419 -85859893 + L1MB3 LINE L1 5695 6182 -1 7 847 234 0 0 0 chr13 34425108 34425134 -85859178 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 847 423 0 0 0 chr13 34425207 34425254 -85859058 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 847 245 284 124 35 chr13 34425294 34425407 -85858905 + MER45A DNA Tip100 52 174 -4 7 847 203 377 21 21 chr13 34427136 34427277 -85857035 - L2c LINE L2 -249 3138 2998 7 847 554 302 12 19 chr13 34428800 34428962 -85855350 - MER63A DNA AcHobo -21 189 29 7 847 198 0 0 0 chr13 34429033 34429055 -85855257 + (T)n Simple_repeat Simple_repeat 1 22 0 7 847 772 222 104 29 chr13 34429511 34429752 -85854560 + RLTR11A2 LTR ERVK 1 259 -268 7 847 608 279 22 31 chr13 34429732 34429954 -85854358 + BGLII_B LTR ERVK 192 411 -30 7 847 252 0 0 0 chr13 34430071 34430099 -85854213 + (CAGGG)n Simple_repeat Simple_repeat 1 28 0 7 847 272 329 23 29 chr13 34430485 34430660 -85853652 + L1MC LINE L1 5693 5866 -2016 7 847 678 224 22 7 chr13 34430794 34430929 -85853383 - B1_Mur1 SINE Alu -1 148 12 7 847 874 216 7 0 chr13 34431123 34431276 -85853036 + B3A SINE B2 3 156 -42 7 847 378 0 0 0 chr13 34431276 34431318 -85852994 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 847 180 0 0 0 chr13 34431318 34431337 -85852975 + (GA)n Simple_repeat Simple_repeat 1 20 0 7 847 748 243 40 23 chr13 34431337 34431355 -85852957 + B3 SINE B2 156 177 -39 7 847 30 0 0 0 chr13 34431873 34431903 -85852409 + AT_rich Low_complexity Low_complexity 1 30 0 7 847 862 120 7 36 chr13 34432365 34432503 -85851809 + B1_Mus2 SINE Alu 1 134 -13 7 847 192 40 0 0 chr13 34432506 34432531 -85851781 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 847 180 0 0 0 chr13 34432532 34432552 -85851760 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 7 847 903 174 0 13 chr13 34432962 34433113 -85851199 + B1_Mur3 SINE Alu 1 149 0 7 847 676 174 0 20 chr13 34433175 34433322 -85850990 + GA-rich Low_complexity Low_complexity 4 147 0 7 847 459 0 0 0 chr13 34434811 34434862 -85849450 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 847 21 82 0 0 chr13 34436537 34436586 -85847726 + GC_rich Low_complexity Low_complexity 1 49 0 7 847 25 0 0 0 chr13 34436875 34436900 -85847412 + GC_rich Low_complexity Low_complexity 1 25 0 7 847 21 0 0 0 chr13 34437007 34437028 -85847284 + GC_rich Low_complexity Low_complexity 1 21 0 7 847 266 206 0 14 chr13 34438578 34438647 -85845665 + CT-rich Low_complexity Low_complexity 3 70 0 7 847 21 0 0 0 chr13 34439819 34439840 -85844472 + GC_rich Low_complexity Low_complexity 1 21 0 7 847 223 347 114 13 chr13 34439921 34440070 -85844242 + L2a LINE L2 3263 3426 0 7 847 789 81 0 0 chr13 34441589 34441712 -85842600 + (GA)n Simple_repeat Simple_repeat 1 123 0 7 847 304 248 65 67 chr13 34442228 34442334 -85841978 - PB1D10 SINE Alu -1 119 6 7 847 290 219 0 99 chr13 34442382 34442463 -85841849 + RLTR25A LTR ERVK 500 572 -531 7 847 505 132 0 0 chr13 34442418 34442494 -85841818 + B1_Mus2 SINE Alu 54 129 -18 7 847 293 279 38 0 chr13 34442587 34442666 -85841646 - ID4_ SINE ID 0 83 2 7 847 1012 217 38 10 chr13 34443020 34443229 -85841083 - B3 SINE B2 -1 215 1 7 847 24 32 0 0 chr13 34443237 34443268 -85841044 + AT_rich Low_complexity Low_complexity 1 31 0 7 847 774 280 61 41 chr13 34443296 34443658 -85840654 + L1MC3 LINE L1 6677 7045 -740 7 847 720 286 48 11 chr13 34443652 34443924 -85840388 + L1MA4 LINE L1 5644 5925 -375 7 847 414 0 0 0 chr13 34443944 34443990 -85840322 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 847 366 293 65 30 chr13 34444235 34444404 -85839908 + L1MC3 LINE L1 7031 7205 -580 7 847 188 111 0 27 chr13 34444569 34444606 -85839706 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 7 847 372 329 27 27 chr13 34444612 34444636 -85839676 - B1F1 SINE Alu -1 148 7 7 847 472 305 0 0 chr13 34444636 34444754 -85839558 - ID_B1 SINE B4 -19 205 88 7 847 323 326 57 14 chr13 34445313 34445453 -85838859 + ORR1E LTR MaLR 1 146 -213 7 847 397 227 214 58 chr13 34445749 34445905 -85838407 + B3 SINE B2 9 195 -21 7 847 222 91 0 0 chr13 34445905 34445938 -85838374 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 7 847 397 189 120 50 chr13 34445938 34445959 -85838353 + B3 SINE B2 196 212 -4 7 847 578 347 67 27 chr13 34446015 34446492 -85837820 - L1ME2 LINE L1 -44 6120 5625 7 847 221 343 14 0 chr13 34446575 34446645 -85837667 + ID4 SINE ID 3 73 -10 7 847 1741 204 51 8 chr13 34446726 34447081 -85837231 + ORR1D2 LTR MaLR 1 370 0 7 847 961 47 0 0 chr13 34447081 34447209 -85837103 + B1_Mus2 SINE Alu 20 147 0 7 847 486 0 0 0 chr13 34447209 34447263 -85837049 + (A)n Simple_repeat Simple_repeat 1 54 0 7 847 540 0 0 0 chr13 34448372 34448432 -85835880 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 7 847 246 105 0 0 chr13 34448767 34448805 -85835507 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 847 453 19 0 0 chr13 34448959 34449013 -85835299 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 847 246 315 70 43 chr13 34449143 34449307 -85835005 + MIR SINE MIR 2 162 -100 7 847 326 301 31 61 chr13 34449431 34449594 -85834718 + RMER15 LTR ERVL 1 158 -417 7 847 567 279 22 27 chr13 34449615 34449799 -85834513 + RMER15 LTR ERVL 296 478 -97 7 847 510 17 0 0 chr13 34450253 34450312 -85834000 + (TA)n Simple_repeat Simple_repeat 1 59 0 7 847 745 249 18 12 chr13 34450358 34450521 -85833791 + RSINE1 SINE B4 2 165 0 7 847 21 57 0 0 chr13 34450526 34450561 -85833751 + AT_rich Low_complexity Low_complexity 1 35 0 7 847 27 0 0 0 chr13 34450583 34450610 -85833702 + AT_rich Low_complexity Low_complexity 1 27 0 7 847 252 214 212 12 chr13 34451223 34451308 -85833004 - PB1D10 SINE Alu 0 117 16 7 847 657 272 37 56 chr13 34451385 34451599 -85832713 + B3 SINE B2 6 215 -1 7 847 262 333 0 0 chr13 34451681 34451762 -85832550 + (CATATA)n Simple_repeat Simple_repeat 5 85 0 7 847 541 125 250 0 chr13 34451821 34451925 -85832387 - B1_Mur2 SINE Alu -10 139 10 7 847 347 283 48 48 chr13 34451997 34452142 -85832170 - B1F1 SINE Alu -1 148 4 7 847 252 59 0 0 chr13 34452223 34452257 -85832055 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 847 247 274 169 19 chr13 34452304 34452464 -85831848 - L1MA6 LINE L1 -104 6196 6013 7 847 258 0 47 23 chr13 34453288 34453331 -85830981 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 847 238 309 37 0 chr13 34453601 34453682 -85830630 + ORR1E LTR MaLR 1 84 -275 7 847 1163 61 7 0 chr13 34454067 34454214 -85830098 - B1_Mus1 SINE Alu 0 148 1 7 847 284 250 35 12 chr13 34454659 34454744 -85829568 - PB1D7 SINE Alu -1 119 33 7 847 1819 87 4 19 chr13 34456549 34456807 -85827505 + L1_Mus1 LINE L1 6314 6567 0 7 847 513 0 0 0 chr13 34456826 34456883 -85827429 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 847 509 307 113 32 chr13 34457473 34457783 -85826529 + RMER5 LTR ERV1 112 446 -88 7 847 1644 195 24 43 chr13 34458313 34458688 -85825624 + ORR1D1 LTR MaLR 7 374 0 7 847 386 36 36 0 chr13 34459891 34459946 -85824366 + (TCTCTG)n Simple_repeat Simple_repeat 2 58 0 7 847 2980 103 2 0 chr13 34460445 34460844 -85823468 + MTB LTR MaLR 1 400 0 7 847 540 234 60 144 chr13 34461044 34461259 -85823053 - MTEa LTR MaLR 0 379 183 7 847 295 240 83 0 chr13 34461337 34461433 -85822879 + B2_Mm2 SINE B2 87 190 -5 7 847 316 286 0 0 chr13 34461430 34461514 -85822798 - MTEa LTR MaLR -282 97 14 7 847 285 288 84 21 chr13 34462380 34462522 -85821790 - MER21B LTR ERV1 -615 248 98 7 847 240 35 0 0 chr13 34462886 34462915 -85821397 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 847 225 316 19 58 chr13 34462966 34463070 -85821242 + MLT1A1 LTR MaLR 39 138 -227 7 847 242 179 210 37 chr13 34463231 34463312 -85821000 + MLT1A1 LTR MaLR 298 392 -16 7 847 1134 203 22 0 chr13 34463652 34463884 -85820428 + MTD LTR MaLR 171 407 -12 7 847 183 333 65 28 chr13 34464352 34464460 -85819852 + L2c LINE L2 3242 3353 -34 7 847 306 0 0 0 chr13 34464507 34464541 -85819771 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 847 287 331 63 84 chr13 34465399 34465683 -85818629 - ORR1E LTR MaLR -6 353 76 7 847 400 245 0 47 chr13 34465738 34465845 -85818467 + PB1 SINE Alu 21 122 -5 7 847 363 236 0 0 chr13 34465851 34465923 -85818389 + ID4 SINE ID 1 72 -11 7 847 801 58 0 0 chr13 34467680 34467783 -85816529 + (TCC)n Simple_repeat Simple_repeat 1 103 0 7 847 201 200 123 41 chr13 34468859 34468932 -85815380 + MER5B DNA MER1_type 31 109 -69 7 847 438 274 177 62 chr13 34469284 34469510 -85814802 + MLT1C LTR MaLR 1 252 -215 7 847 1376 298 23 59 chr13 34469817 34470526 -85813786 - Lx8 LINE L1 -965 6508 5828 7 847 185 0 40 0 chr13 34470647 34470672 -85813640 + (TGGGGG)n Simple_repeat Simple_repeat 4 29 0 7 847 225 268 35 35 chr13 34470704 34470789 -85813523 + MLT1C LTR MaLR 308 392 -16 7 847 374 264 0 0 chr13 34470815 34470902 -85813410 + MLT1C LTR MaLR 365 451 -16 7 847 298 248 57 74 chr13 34471517 34471639 -85812673 - MER90a LTR ERV1 -20 594 475 7 105 1900 125 130 6 chr13 34471674 34471997 -85812315 - Lx3_Mus LINE L1 0 7009 6647 7 848 289 361 62 20 chr13 34472009 34472204 -85812108 - MER90a LTR ERV1 -200 375 173 7 848 755 190 0 7 chr13 34472557 34472695 -85811617 - B1_Mur4 SINE Alu -1 149 13 8 848 261 254 0 136 chr13 34472592 34472724 -85811588 - MT2B LTR ERVL -337 264 151 8 848 244 125 0 0 chr13 34472977 34473017 -85811295 + MLT1A1 LTR MaLR 300 339 -69 8 848 221 248 211 0 chr13 34473036 34473145 -85811167 + MER5A DNA MER1_type 34 165 -24 8 848 27 49 0 0 chr13 34473904 34473945 -85810367 + AT_rich Low_complexity Low_complexity 1 41 0 8 848 378 0 0 0 chr13 34474613 34474655 -85809657 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 848 314 216 67 13 chr13 34474692 34474767 -85809545 - MER74A LTR ERVL -207 351 273 8 848 253 322 22 0 chr13 34475075 34475165 -85809147 - MER74A LTR ERVL -335 223 132 8 848 2351 148 58 5 chr13 34475836 34476236 -85808076 + MTC LTR MaLR 1 421 0 8 848 220 97 0 0 chr13 34476458 34476489 -85807823 + PB1D9 SINE Alu 77 107 -13 8 848 324 354 155 7 chr13 34476505 34476653 -85807659 + B3A SINE B2 13 182 -16 8 848 758 225 0 0 chr13 34476750 34476892 -85807420 + B1_Mus2 SINE Alu 5 146 -1 8 848 677 202 39 0 chr13 34476913 34477042 -85807270 + B1_Mus2 SINE Alu 1 134 -13 8 848 243 257 29 0 chr13 34478898 34478968 -85805344 + ID4_ SINE ID 8 79 -4 8 848 21 36 0 0 chr13 34479109 34479137 -85805175 + AT_rich Low_complexity Low_complexity 1 28 0 8 848 821 270 16 5 chr13 34479222 34479412 -85804900 - B3A SINE B2 -3 195 4 8 848 270 115 0 0 chr13 34479620 34479672 -85804640 + (T)n Simple_repeat Simple_repeat 1 52 0 8 848 240 239 0 78 chr13 34480848 34480925 -85803387 + HAL1 LINE L1 1877 1947 -560 8 848 354 282 91 29 chr13 34481042 34481292 -85803020 - MTEb LTR MaLR 0 379 97 8 848 519 200 127 8 chr13 34481689 34481815 -85802497 + B3A SINE B2 1 141 -57 8 848 426 20 0 0 chr13 34481828 34481879 -85802433 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 848 23 33 0 0 chr13 34481900 34481930 -85802382 + AT_rich Low_complexity Low_complexity 1 30 0 8 848 418 332 99 19 chr13 34482669 34482881 -85801431 - MLT1I LTR MaLR -124 287 59 8 848 282 56 0 0 chr13 34483653 34483689 -85800623 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 8 848 423 83 0 0 chr13 34483689 34483749 -85800563 + (TCCA)n Simple_repeat Simple_repeat 4 63 0 8 848 220 234 0 83 chr13 34483947 34484031 -85800281 + GA-rich Low_complexity Low_complexity 3 79 0 8 848 225 325 86 31 chr13 34484333 34484495 -85799817 - MIRb SINE MIR -75 193 23 8 848 24 32 0 0 chr13 34485538 34485569 -85798743 + AT_rich Low_complexity Low_complexity 1 31 0 8 848 731 292 133 28 chr13 34486517 34486982 -85797330 - L1MC LINE L1 -2081 5801 5288 8 848 272 309 63 146 chr13 34487169 34487408 -85796904 - LTR33 LTR ERVL -3 512 294 8 848 885 74 0 0 chr13 34487915 34488050 -85796262 + (TG)n Simple_repeat Simple_repeat 2 136 0 8 848 272 304 16 8 chr13 34488694 34488820 -85795492 + L1MC4 LINE L1 7690 7816 -226 8 848 401 307 198 56 chr13 34488965 34489054 -85795258 + B4A SINE B4 5 101 -191 8 848 447 19 0 0 chr13 34489054 34489106 -85795206 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 848 401 307 198 56 chr13 34489106 34489268 -85795044 + B4A SINE B4 102 292 0 8 848 310 269 0 13 chr13 34489324 34489403 -85794909 + B4A SINE B4 215 292 0 8 848 224 170 19 0 chr13 34490641 34490694 -85793618 + GA-rich Low_complexity Low_complexity 1 54 0 8 848 351 0 0 0 chr13 34490704 34490743 -85793569 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 848 315 0 0 0 chr13 34490743 34490777 -85793535 + (GA)n Simple_repeat Simple_repeat 2 36 0 8 848 502 256 168 32 chr13 34490978 34491228 -85793084 - RMER5 LTR ERV1 0 534 251 8 848 207 0 0 0 chr13 34492058 34492081 -85792231 + (A)n Simple_repeat Simple_repeat 1 23 0 8 848 250 146 21 0 chr13 34492087 34492135 -85792177 + MLT1A1 LTR MaLR 360 408 0 8 848 1246 288 48 7 chr13 34492647 34493060 -85791252 + RCHARR1 DNA MER1_type 42 471 -503 8 848 744 314 5 5 chr13 34493074 34493282 -85791030 - ID_B1 SINE B4 -11 213 6 8 848 627 306 18 6 chr13 34493344 34493515 -85790797 + B3A SINE B2 1 173 -25 8 848 234 0 0 0 chr13 34493515 34493541 -85790771 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 8 848 1453 226 94 5 chr13 34493551 34493956 -85790356 + RCHARR1 DNA MER1_type 532 972 -2 8 848 278 77 0 0 chr13 34493957 34493996 -85790316 - U2 snRNA snRNA -149 39 1 8 848 198 274 55 0 chr13 34494974 34495047 -85789265 + MIR SINE MIR 140 216 -46 8 848 22 88 0 0 chr13 34495393 34495450 -85788862 + AT_rich Low_complexity Low_complexity 1 57 0 8 848 24 91 0 0 chr13 34495595 34495661 -85788651 + AT_rich Low_complexity Low_complexity 1 66 0 8 848 301 280 146 7 chr13 34498421 34498572 -85785740 - RMER15 LTR ERVL 0 575 404 8 848 364 348 43 19 chr13 34498584 34498745 -85785567 - Lx8 LINE L1 -248 7225 7061 8 848 1287 277 66 52 chr13 34499276 34499855 -85784457 - L1MA4 LINE L1 -362 5938 5352 8 848 230 296 14 0 chr13 34501306 34501377 -85782935 - HAL1b LINE L1 -485 1524 1453 1 848 444 199 25 5 chr13 34501542 34501653 -85782659 - ORR1E LTR MaLR -23 396 253 2 848 1124 154 90 0 chr13 34501709 34501910 -85782402 - URR1A DNA MER1_type -1 225 7 3 848 531 327 76 33 chr13 34501953 34502192 -85782120 - MLT2B2 LTR ERVL -132 388 149 4 848 252 0 0 0 chr13 34502192 34502220 -85782092 + (TGGGGG)n Simple_repeat Simple_repeat 1 28 0 5 848 531 313 74 9 chr13 34502220 34502356 -85781956 - MLT2B2 LTR ERVL -366 149 1 4 848 335 316 65 29 chr13 34502365 34502540 -85781772 + MIR SINE MIR 7 191 -77 6 848 2118 209 37 37 chr13 34503430 34503922 -85780390 - RMER1C Other Other -7 1335 844 7 848 318 320 10 39 chr13 34503990 34504094 -85780218 - RMER1C Other Other -1217 125 25 8 848 719 324 23 12 chr13 34505202 34505461 -85778851 + Tigger7 DNA MER2_type 2 263 -2228 9 848 550 268 125 30 chr13 34505501 34505797 -85778515 + Tigger7 DNA MER2_type 2158 2481 -10 9 848 534 292 49 29 chr13 34506288 34506531 -85777781 + MER2 DNA MER2_type 87 334 -11 1 848 342 0 0 0 chr13 34506955 34506993 -85777319 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 848 524 281 56 39 chr13 34507123 34507301 -85777011 + B3A SINE B2 4 184 -14 1 848 962 126 141 40 chr13 34507483 34507681 -85776631 - URR1B DNA MER1_type -3 222 5 1 848 312 27 0 0 chr13 34508022 34508059 -85776253 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 1 848 919 248 9 37 chr13 34509284 34509502 -85774810 + B3 SINE B2 5 216 0 1 848 249 108 0 0 chr13 34509503 34509540 -85774772 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 848 430 284 70 26 chr13 34510043 34510273 -85774039 + L1MA6 LINE L1 5991 6248 -52 1 848 641 269 79 20 chr13 34510288 34510542 -85773770 - ORR1E LTR MaLR -5 354 86 1 848 234 0 0 0 chr13 34510548 34510574 -85773738 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 848 242 317 37 0 chr13 34510770 34510852 -85773460 + B1_Mur3 SINE Alu 2 86 -63 2 848 674 272 78 34 chr13 34510852 34511276 -85773036 + MLT2B4 LTR ERVL 50 552 -4 2 848 253 111 0 53 chr13 34511407 34511431 -85772881 + (CCA)n Simple_repeat Simple_repeat 3 26 0 2 848 288 0 0 0 chr13 34511431 34511463 -85772849 + (CAG)n Simple_repeat Simple_repeat 1 32 0 2 848 253 111 0 53 chr13 34511463 34511479 -85772833 + (CCA)n Simple_repeat Simple_repeat 3 17 0 2 848 993 106 0 0 chr13 34511479 34511659 -85772653 + (CAG)n Simple_repeat Simple_repeat 1 180 0 2 848 253 111 0 53 chr13 34511659 34511674 -85772638 + (CCA)n Simple_repeat Simple_repeat 3 17 0 2 848 825 131 0 0 chr13 34511674 34511850 -85772462 + (CAG)n Simple_repeat Simple_repeat 1 176 0 2 848 1162 191 65 201 chr13 34514195 34514356 -85769956 - ORR1D1 LTR MaLR -1 373 190 2 848 902 122 0 6 chr13 34514356 34514537 -85769775 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 848 1162 191 65 201 chr13 34514537 34514807 -85769505 - ORR1D1 LTR MaLR -185 189 1 2 848 188 287 153 27 chr13 34515397 34515508 -85768804 + MIRc SINE MIR 2 126 -142 3 848 351 0 0 0 chr13 34516848 34516887 -85767425 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 848 507 60 0 0 chr13 34517922 34517989 -85766323 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 848 786 89 15 0 chr13 34518406 34518542 -85765770 - B1_Mus1 SINE Alu 0 149 7 3 848 373 236 102 83 chr13 34518408 34518565 -85765747 - B4 SINE B4 -69 223 64 3 848 243 0 0 0 chr13 34518609 34518636 -85765676 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 848 333 0 0 0 chr13 34518636 34518672 -85765640 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 848 519 273 43 0 chr13 34519626 34519765 -85764547 + B1F SINE Alu 5 149 0 3 848 422 18 18 0 chr13 34519906 34519961 -85764351 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 848 305 242 11 32 chr13 34521335 34521429 -85762883 - MTE2a LTR MaLR -10 369 278 3 848 428 18 36 0 chr13 34521758 34521814 -85762498 + (TCTCCC)n Simple_repeat Simple_repeat 1 58 0 4 848 394 335 25 25 chr13 34521825 34521987 -85762325 - RSINE1 SINE B4 -1 164 3 4 848 360 0 0 0 chr13 34523670 34523710 -85760602 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 848 204 132 28 56 chr13 34523713 34523785 -85760527 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 848 1421 223 75 110 chr13 34523788 34524098 -85760214 - MT2A LTR ERVL -73 460 134 4 848 2377 98 56 13 chr13 34524098 34524472 -85759840 + L1_Mus3 LINE L1 6246 6635 -3 4 848 1421 223 75 110 chr13 34524472 34524625 -85759687 - MT2A LTR ERVL -400 133 13 4 848 282 276 13 26 chr13 34524728 34524806 -85759506 - MIR SINE MIR -166 96 20 4 848 180 111 0 0 chr13 34526282 34526309 -85758003 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 4 848 330 258 106 41 chr13 34526389 34526559 -85757753 - L1MEf LINE L1 -4905 1295 1115 4 848 1121 75 0 45 chr13 34526744 34526898 -85757414 + B1_Mus1 SINE Alu 2 148 0 4 848 230 300 25 0 chr13 34526914 34526994 -85757318 - L1MEf LINE L1 -4767 1433 1352 5 848 192 40 0 0 chr13 34528473 34528498 -85755814 + (G)n Simple_repeat Simple_repeat 1 25 0 5 848 819 294 84 42 chr13 34528606 34529036 -85755276 + Lx8 LINE L1 6970 7417 -56 5 848 288 222 0 0 chr13 34529942 34530014 -85754298 + GA-rich Low_complexity Low_complexity 2 73 0 5 848 2380 58 19 3 chr13 34530095 34530406 -85753906 - L1_Mus3 LINE L1 0 6638 6323 5 848 207 0 0 0 chr13 34530552 34530575 -85753737 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 848 690 75 0 0 chr13 34530771 34530864 -85753448 + (TTCC)n Simple_repeat Simple_repeat 3 95 0 5 848 544 332 37 22 chr13 34531116 34531384 -85752928 + B4A SINE B4 9 280 -12 5 848 288 0 0 0 chr13 34531401 34531433 -85752879 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 848 805 240 148 54 chr13 34531645 34531976 -85752336 + MTE2b LTR MaLR 5 366 -13 5 848 423 0 0 0 chr13 34532370 34532417 -85751895 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 848 188 0 74 0 chr13 34533855 34533882 -85750430 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 6 848 279 0 0 0 chr13 34533919 34533950 -85750362 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 848 290 26 26 0 chr13 34533950 34533988 -85750324 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 848 21 0 0 0 chr13 34534470 34534491 -85749821 + AT_rich Low_complexity Low_complexity 1 21 0 6 848 429 70 0 0 chr13 34534731 34534788 -85749524 + (CAT)n Simple_repeat Simple_repeat 2 58 0 6 848 250 191 16 0 chr13 34534926 34534989 -85749323 + T-rich Low_complexity Low_complexity 1 64 0 6 848 326 288 8 63 chr13 34535385 34535511 -85748801 + ID_B1 SINE B4 70 188 -36 6 848 1157 106 0 11 chr13 34536026 34536207 -85748105 + (GGA)n Simple_repeat Simple_repeat 1 179 0 6 848 1024 150 161 0 chr13 34536502 34536695 -85747617 - URR1B DNA MER1_type -1 224 1 6 848 809 221 79 20 chr13 34537279 34537482 -85746830 + B3 SINE B2 2 216 0 7 848 222 37 0 0 chr13 34537483 34537510 -85746802 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 7 848 234 286 0 0 chr13 34537734 34537790 -85746522 - ID SINE ID -136 88 33 7 848 583 301 53 62 chr13 34537813 34538057 -85746255 - B4 SINE B4 -44 248 7 7 848 319 222 12 12 chr13 34538225 34538307 -85746005 - PB1D10 SINE Alu -18 99 18 7 848 211 247 0 0 chr13 34538987 34539044 -85745268 - MIR SINE MIR -7 261 201 7 848 380 296 111 0 chr13 34539204 34539366 -85744946 + L1MA5 LINE L1 5985 6164 -136 7 848 3290 99 2 28 chr13 34539551 34540049 -85744263 - L1_Mus3 LINE L1 -1 6637 6153 7 848 446 116 14 0 chr13 34540049 34540118 -85744194 + L1_Mus3 LINE L1 6070 6139 -497 7 848 32167 102 13 4 chr13 34540281 34546437 -85737875 - L1_Mus1 LINE L1 0 6567 348 7 848 327 297 315 16 chr13 34546991 34547165 -85737147 - MLT1F2 LTR MaLR -19 541 316 7 848 644 212 282 30 chr13 34547192 34547441 -85736871 + MTEa LTR MaLR 3 311 -68 8 848 414 0 0 0 chr13 34547441 34547487 -85736825 + (TTCC)n Simple_repeat Simple_repeat 1 46 0 8 848 644 212 282 30 chr13 34547487 34547538 -85736774 + MTEa LTR MaLR 312 379 0 8 848 2053 130 95 3 chr13 34547556 34547926 -85736386 + MTC LTR MaLR 18 421 0 8 848 293 256 13 13 chr13 34548070 34548149 -85736163 + MLT1A1 LTR MaLR 316 394 -14 8 848 505 274 131 4 chr13 34548963 34549223 -85735089 - L1MA6 LINE L1 -26 6274 5982 8 848 722 254 128 25 chr13 34549219 34549546 -85734766 - L1MA6 LINE L1 -636 5664 5304 8 848 27 0 0 0 chr13 34549632 34549659 -85734653 + AT_rich Low_complexity Low_complexity 1 27 0 8 848 340 276 11 11 chr13 34549956 34550044 -85734268 - MER2 DNA MER2_type -3 342 255 8 848 256 331 192 7 chr13 34550147 34550293 -85734019 + B4A SINE B4 92 264 -28 8 848 186 43 0 0 chr13 34550310 34550333 -85733979 + (CA)n Simple_repeat Simple_repeat 1 23 0 8 848 450 229 15 22 chr13 34550364 34550498 -85733814 - MER2 DNA MER2_type -84 261 129 8 848 5080 98 6 15 chr13 34550749 34551471 -85732841 - Lx LINE L1 -6 6648 5934 8 848 7500 151 18 2 chr13 34551471 34552704 -85731608 + Lx LINE L1 4631 5883 0 8 848 246 370 8 8 chr13 34553182 34553310 -85731002 + MIR SINE MIR 118 245 -17 9 848 696 64 0 0 chr13 34553401 34553495 -85730817 + (GAAA)n Simple_repeat Simple_repeat 3 96 0 9 848 618 14 0 0 chr13 34555510 34555581 -85728731 + (GA)n Simple_repeat Simple_repeat 1 71 0 9 848 271 125 41 20 chr13 34555750 34555799 -85728513 - L1MA5 LINE L1 -107 6193 6144 9 848 557 254 8 0 chr13 34555799 34555929 -85728383 + RSINE1 SINE B4 6 136 -29 9 848 633 167 0 0 chr13 34556001 34556151 -85728161 + CT-rich Low_complexity Low_complexity 1 150 0 9 848 315 235 129 32 chr13 34556202 34556463 -85727849 - L1MA8 LINE L1 -146 6154 5876 9 848 288 70 0 0 chr13 34557036 34557079 -85727233 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 9 848 720 155 0 0 chr13 34557230 34557372 -85726940 + (TG)n Simple_repeat Simple_repeat 2 143 0 9 848 498 17 0 0 chr13 34557690 34557749 -85726563 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 848 292 279 13 0 chr13 34557782 34557861 -85726451 - ID4_ SINE ID -1 82 3 1 848 507 73 0 0 chr13 34558864 34558932 -85725380 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 848 459 0 0 0 chr13 34558932 34558982 -85725330 + (GA)n Simple_repeat Simple_repeat 1 51 0 1 848 1184 56 0 0 chr13 34559346 34559488 -85724824 + B1_Mus1 SINE Alu 4 145 -3 1 848 369 62 0 0 chr13 34559488 34559536 -85724776 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 1 848 505 315 89 50 chr13 34559538 34559819 -85724493 + B4A SINE B4 1 292 0 1 848 235 308 11 0 chr13 34560086 34560177 -85724135 - L1MA5A LINE L1 0 6300 6209 1 848 419 253 73 12 chr13 34560243 34560495 -85723817 - RMER15 LTR ERVL -5 570 275 1 848 288 272 68 26 chr13 34560525 34560642 -85723670 - RMER15 LTR ERVL -446 129 8 1 848 21 57 0 0 chr13 34561378 34561413 -85722899 + AT_rich Low_complexity Low_complexity 1 35 0 1 848 959 297 68 98 chr13 34561909 34562516 -85721796 - L1MA5A LINE L1 -335 5962 5362 1 848 261 0 0 0 chr13 34562516 34562545 -85721767 + (GTTTG)n Simple_repeat Simple_repeat 1 29 0 1 848 744 185 14 22 chr13 34562547 34562685 -85721627 - B1_Mur4 SINE Alu -12 138 2 1 848 959 297 68 98 chr13 34562685 34562750 -85721562 - L1MA5A LINE L1 -936 5361 5307 1 848 39051 8 1 7 chr13 34562753 34567953 -85716359 + L1Md_A LINE L1 422 5586 -297 1 848 9101 9 0 0 chr13 34567953 34568949 -85715363 + L1Md_A LINE L1 5587 6582 0 1 848 622 251 122 22 chr13 34568954 34569295 -85715017 - L1MA5A LINE L1 -831 5315 4923 1 848 625 214 50 80 chr13 34571550 34571789 -85712523 - RMER17C LTR ERVK -29 381 150 1 848 926 264 16 28 chr13 34572655 34572904 -85711408 + B4A SINE B4 4 249 -43 1 848 329 176 58 19 chr13 34572968 34573072 -85711240 + (CA)n Simple_repeat Simple_repeat 1 108 0 1 848 281 129 77 8 chr13 34573095 34573212 -85711100 + (CA)n Simple_repeat Simple_repeat 1 125 0 1 848 405 262 0 0 chr13 34573996 34574122 -85710190 + (CA)n Simple_repeat Simple_repeat 2 127 0 1 848 1172 214 52 18 chr13 34574131 34574417 -85709895 - MTD LTR MaLR -14 405 110 1 848 515 244 8 0 chr13 34574475 34574594 -85709718 - MTD LTR MaLR -299 120 1 1 848 265 288 38 0 chr13 34574680 34574760 -85709552 + Tigger7 DNA MER2_type 2399 2481 -10 1 848 2221 127 10 125 chr13 34574945 34575360 -85708952 + ORR1B2 LTR MaLR 1 367 0 1 848 892 101 14 0 chr13 34575496 34575635 -85708677 + RLTR13D5 LTR ERVK 1 141 -882 1 848 3184 25 0 2 chr13 34575633 34576036 -85708276 - ORR1A1-int LTR MaLR -53 1739 1338 1 848 6016 75 21 2 chr13 34576041 34576902 -85707410 + RLTR13D5 LTR ERVK 147 1023 0 1 848 638 58 11 0 chr13 34577157 34577244 -85707068 + (TC)n Simple_repeat Simple_repeat 1 88 0 1 848 268 341 66 0 chr13 34577450 34577541 -85706771 + RSINE1 SINE B4 61 157 -8 1 848 405 0 0 0 chr13 34578385 34578430 -85705882 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 1 848 1039 118 13 0 chr13 34578430 34578583 -85705729 - B2_Mm2 SINE B2 -38 157 3 1 848 243 272 30 67 chr13 34579131 34579265 -85705047 - MLT1A0 LTR MaLR -7 383 255 1 848 334 252 7 158 chr13 34579297 34579347 -85704965 - MLT1A0 LTR MaLR -231 134 92 1 848 1384 165 9 0 chr13 34579347 34579571 -85704741 - URR1A DNA MER1_type 0 226 1 1 848 334 252 7 158 chr13 34579571 34579666 -85704646 - MLT1A0 LTR MaLR -274 91 11 1 848 219 317 0 0 chr13 34579797 34579857 -85704455 + PB1D10 SINE Alu 9 68 -49 1 848 822 236 113 35 chr13 34580203 34580566 -85703746 - MTD LTR MaLR -24 395 5 1 848 2340 302 55 43 chr13 34581088 34582071 -85702241 - Lx8 LINE L1 -7 7466 6472 1 848 603 27 0 0 chr13 34582072 34582145 -85702167 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 848 205 222 19 0 chr13 34582146 34582200 -85702112 + CT-rich Low_complexity Low_complexity 2 56 0 1 848 310 344 0 30 chr13 34582201 34582300 -85702012 - B1F SINE Alu -52 97 2 1 848 183 287 142 39 chr13 34582940 34583067 -85701245 - L2a LINE L2 -275 3151 3012 1 848 234 0 0 0 chr13 34583102 34583128 -85701184 + (T)n Simple_repeat Simple_repeat 1 26 0 1 848 251 379 0 31 chr13 34583132 34583260 -85701052 + Tigger5 DNA MER2_type 62 185 -2221 1 848 246 62 0 0 chr13 34583397 34583429 -85700883 + (A)n Simple_repeat Simple_repeat 1 32 0 1 848 477 170 21 0 chr13 34583567 34583654 -85700658 + ORR1D1 LTR MaLR 3 91 -283 1 848 600 166 70 70 chr13 34583654 34583810 -85700502 - URR1B DNA MER1_type 0 225 70 1 848 1089 213 46 27 chr13 34583822 34584083 -85700229 + ORR1D1 LTR MaLR 75 340 -34 1 848 274 319 41 7 chr13 34584167 34584312 -85700000 - L1MC4 LINE L1 -421 7621 7472 1 848 230 163 0 23 chr13 34584323 34584367 -85699945 + B1F SINE Alu 105 147 -2 1 848 325 307 79 39 chr13 34584580 34584834 -85699478 + L1MC5 LINE L1 6962 7225 -736 1 848 269 267 58 0 chr13 34585286 34585372 -85698940 - L1MEg LINE L1 -4715 1369 1279 1 848 241 333 0 0 chr13 34585479 34585545 -85698767 + CT-rich Low_complexity Low_complexity 2 67 0 1 848 248 273 14 10 chr13 34585545 34585637 -85698675 - ID4_ SINE ID -54 98 9 1 848 785 254 18 6 chr13 34585948 34586114 -85698198 - B3A SINE B2 -30 168 1 1 848 888 319 88 18 chr13 34586753 34587140 -85697172 - MTE-int LTR MaLR -195 1385 972 1 848 483 384 45 29 chr13 34587158 34587472 -85696840 - MTE-int LTR MaLR -685 895 577 1 848 1103 349 32 13 chr13 34587524 34587992 -85696320 - MTE-int LTR MaLR -1102 478 2 1 848 1423 134 9 13 chr13 34588012 34588238 -85696074 + URR1B DNA MER1_type 1 225 0 1 848 300 304 9 89 chr13 34588362 34588474 -85695838 - MTEa LTR MaLR -274 105 3 1 848 235 316 22 22 chr13 34588798 34588976 -85695336 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 848 23 33 0 0 chr13 34589222 34589252 -85695060 + AT_rich Low_complexity Low_complexity 1 30 0 1 848 323 324 29 0 chr13 34589797 34589936 -85694376 + Helitron2Na_Mam RC Helitron? 174 316 -8 1 848 194 62 0 30 chr13 34590773 34590806 -85693506 + (TTTTTA)n Simple_repeat Simple_repeat 5 36 0 1 848 1304 255 40 19 chr13 34590849 34591173 -85693139 - Lx8 LINE L1 -146 7327 6997 1 848 403 263 6 12 chr13 34592177 34592350 -85691962 + (TGG)n Simple_repeat Simple_repeat 1 172 0 1 848 229 295 63 0 chr13 34592896 34592991 -85691321 - ORR1E LTR MaLR -3 356 256 1 848 1913 224 23 82 chr13 34593051 34593611 -85690701 + MT2A LTR ERVL 1 527 -6 1 848 1051 297 46 40 chr13 34594056 34594403 -85689909 + MTEa LTR MaLR 28 376 -3 1 848 553 157 43 9 chr13 34596690 34596806 -85687506 + RMER4B LTR ERVK 1 120 -465 1 848 233 130 36 18 chr13 34596836 34596891 -85687421 + RMER4B LTR ERVK 530 585 0 1 848 812 282 69 37 chr13 34596996 34597372 -85686940 - MLT1B LTR MaLR 0 390 3 1 848 569 164 13 18 chr13 34597769 34597893 -85686419 - MTE2b LTR MaLR -19 400 262 1 848 937 236 122 15 chr13 34597958 34598229 -85686083 - MTE2b LTR MaLR -79 300 1 1 848 358 236 0 0 chr13 34598234 34598306 -85686006 - B4A SINE B4 -217 75 4 1 848 230 164 18 0 chr13 34598356 34598411 -85685901 + C-rich Low_complexity Low_complexity 3 58 0 1 848 267 216 20 137 chr13 34598533 34598635 -85685677 + ORR1E LTR MaLR 1 90 -269 1 848 419 326 95 43 chr13 34600135 34600164 -85684148 - B4 SINE B4 -2 290 262 1 848 216 0 0 0 chr13 34600164 34600188 -85684124 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 848 419 326 95 43 chr13 34600188 34600389 -85683923 - B4 SINE B4 -31 261 47 1 848 2011 129 57 143 chr13 34600389 34600497 -85683815 + RLTR23 LTR ERV1 1 100 -330 1 848 221 0 0 33 chr13 34600497 34600527 -85683785 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 848 252 0 0 0 chr13 34600529 34600557 -85683755 + (CCA)n Simple_repeat Simple_repeat 1 28 0 1 848 2011 129 57 143 chr13 34600557 34600915 -85683397 + RLTR23 LTR ERV1 101 430 0 1 848 419 326 95 43 chr13 34600915 34600936 -85683376 - B4 SINE B4 -246 46 29 1 848 1087 139 115 34 chr13 34600945 34601154 -85683158 + URR1A DNA MER1_type 1 226 0 1 848 435 309 77 68 chr13 34601530 34601856 -85682456 - ORR1E LTR MaLR -28 331 3 1 848 3880 65 13 0 chr13 34601948 34602543 -85681769 - L1_Mus2 LINE L1 -496 6070 5470 1 13 3750 75 2 6 chr13 34602543 34603027 -85681285 + L1_Mus2 LINE L1 6085 6566 0 1 849 563 267 7 0 chr13 34604210 34604345 -85679967 + MER5A1 DNA MER1_type 29 164 -2 1 849 569 270 21 132 chr13 34605394 34605637 -85678675 - B3 SINE B2 0 216 1 1 849 968 196 0 49 chr13 34605666 34605870 -85678442 - URR1A DNA MER1_type -32 194 1 1 849 493 262 75 0 chr13 34606119 34606279 -85678033 - MER58A DNA MER1_type 0 224 53 1 849 38791 30 0 0 chr13 34606416 34612819 -85671493 - L1Md_T LINE L1 0 6585 86 1 849 659 290 144 4 chr13 34613367 34613623 -85670689 - MER2 DNA MER2_type -53 292 1 1 849 222 150 0 0 chr13 34614314 34614354 -85669958 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1 849 1907 154 44 50 chr13 34614474 34614833 -85669479 + RLTR11A LTR ERVK 1 405 -123 1 849 2821 94 15 15 chr13 34614833 34615233 -85669079 + MTB LTR MaLR 1 400 0 1 849 1907 164 23 60 chr13 34615233 34615355 -85668957 + RLTR11A LTR ERVK 406 528 0 1 849 1455 80 37 0 chr13 34615379 34615566 -85668746 + B2_Mm2 SINE B2 2 195 0 1 849 864 158 0 0 chr13 34616135 34616287 -85668025 + C-rich Low_complexity Low_complexity 4 155 0 1 849 860 163 0 12 chr13 34616284 34616452 -85667860 + CT-rich Low_complexity Low_complexity 2 167 0 1 849 1230 49 0 6 chr13 34616470 34616633 -85667679 - L1Md_F2 LINE L1 0 6582 6421 1 849 324 333 0 0 chr13 34616653 34616737 -85667575 - PB1D10 SINE Alu -32 85 2 1 849 518 319 19 10 chr13 34618080 34618286 -85666026 + MER74A LTR ERVL 11 218 -340 1 849 1112 219 206 20 chr13 34618289 34618463 -85665849 + MTD LTR MaLR 11 190 -229 1 849 498 17 0 0 chr13 34618463 34618522 -85665790 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 849 1112 219 206 20 chr13 34618522 34618692 -85665620 + MTD LTR MaLR 191 419 0 1 849 412 344 15 25 chr13 34619569 34619769 -85664543 - MER2 DNA MER2_type 0 345 148 1 849 616 245 19 32 chr13 34619956 34620112 -85664200 + B3A SINE B2 1 154 -44 1 849 180 0 0 0 chr13 34620122 34620142 -85664170 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 849 496 242 57 118 chr13 34620311 34620522 -85663790 - B3A SINE B2 0 198 1 1 849 892 151 7 14 chr13 34622668 34622816 -85661496 - B1_Mm SINE Alu 0 147 1 1 849 291 276 24 24 chr13 34623142 34623268 -85661044 + L1MB4 LINE L1 6042 6167 -13 1 849 477 167 28 44 chr13 34623643 34623825 -85660487 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 1 849 486 275 149 28 chr13 34623863 34624185 -85660127 + L1M5 LINE L1 4917 5277 -869 1 849 1152 64 0 6 chr13 34624198 34624356 -85659956 + B2_Mm2 SINE B2 1 157 -38 1 849 405 0 0 0 chr13 34624356 34624401 -85659911 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 1 849 25 0 0 0 chr13 34624938 34624963 -85659349 + AT_rich Low_complexity Low_complexity 1 25 0 2 849 959 225 14 5 chr13 34624963 34625173 -85659139 - B3 SINE B2 0 216 5 2 849 372 238 24 16 chr13 34625369 34625493 -85658819 + L1ME3A LINE L1 6038 6162 -11 2 849 938 245 97 24 chr13 34625604 34625851 -85658461 - B4 SINE B4 -18 274 10 2 849 370 149 8 197 chr13 34625871 34625988 -85658324 - B3A SINE B2 0 198 92 2 849 849 284 88 88 chr13 34626309 34626965 -85657347 + L1MA9 LINE L1 5373 6028 -284 2 849 295 298 19 19 chr13 34626969 34627075 -85657237 + RSINE1 SINE B4 2 107 -58 2 849 393 22 0 0 chr13 34627250 34627296 -85657016 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 849 432 0 0 0 chr13 34627296 34627343 -85656969 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 849 642 26 0 0 chr13 34628218 34628294 -85656018 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 849 450 0 0 0 chr13 34628430 34628480 -85655832 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 849 825 274 38 15 chr13 34628534 34628849 -85655463 - L1_Mur3 LINE L1 -50 5830 5499 2 849 1073 288 44 46 chr13 34629226 34629768 -85654544 - L1_Mur3 LINE L1 -396 5484 4944 2 849 307 297 129 34 chr13 34629776 34629985 -85654327 - MER45B DNA Tip100 -420 620 392 2 849 694 329 94 0 chr13 34630016 34630323 -85653989 - MER45B DNA Tip100 -688 352 17 2 849 516 165 0 0 chr13 34630609 34630694 -85653618 - 4.5SRNA scRNA scRNA -9 85 1 2 849 966 127 28 0 chr13 34630848 34630990 -85653322 + B1_Mus1 SINE Alu 1 146 -2 2 849 549 309 108 33 chr13 34631388 34631629 -85652683 + B4A SINE B4 9 267 -25 2 849 368 118 15 0 chr13 34631664 34631732 -85652580 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 849 484 302 71 82 chr13 34631835 34632286 -85652026 - LTR37B LTR ERV1 -22 446 1 2 849 409 256 0 0 chr13 34632381 34632463 -85651849 - ID4_ SINE ID 0 83 2 2 849 235 253 0 12 chr13 34632472 34632552 -85651760 - L1MA6 LINE L1 0 6300 6222 2 849 747 230 115 70 chr13 34632599 34632815 -85651497 + B4 SINE B4 39 274 -18 2 849 342 0 0 0 chr13 34632815 34632853 -85651459 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 849 747 230 115 70 chr13 34632853 34632879 -85651433 + B4 SINE B4 275 292 0 2 849 451 70 14 14 chr13 34632988 34633061 -85651251 + (CA)n Simple_repeat Simple_repeat 1 73 0 2 849 265 227 188 18 chr13 34633061 34633173 -85651139 - L1MA6 LINE L1 -355 5945 5815 2 849 347 233 56 0 chr13 34633178 34633268 -85651044 - B1F SINE Alu -2 147 53 2 849 3946 86 28 70 chr13 34633514 34634227 -85650085 + RMER17A LTR ERVK 69 751 0 2 849 365 297 55 117 chr13 34634355 34634398 -85649914 - B4 SINE B4 -16 276 234 2 849 888 117 0 0 chr13 34634398 34634552 -85649760 + (TC)n Simple_repeat Simple_repeat 2 155 0 2 849 375 23 0 0 chr13 34634552 34634595 -85649717 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 849 413 291 35 88 chr13 34634595 34634840 -85649472 - B4A SINE B4 -59 233 5 2 849 732 209 183 0 chr13 34634847 34635038 -85649274 - B4A SINE B4 -66 226 1 2 849 537 16 0 0 chr13 34635166 34635228 -85649084 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 849 956 47 0 0 chr13 34635239 34635366 -85648946 - B1_Mm SINE Alu 0 147 21 2 849 816 131 0 0 chr13 34636341 34636471 -85647841 - B1_Mur4 SINE Alu -20 130 1 2 849 228 87 106 21 chr13 34636440 34636487 -85647825 - MT2B2 LTR ERVL -297 287 237 2 849 251 316 61 0 chr13 34636476 34636590 -85647722 - PB1 SINE Alu -2 125 5 2 849 3093 67 27 2 chr13 34636842 34637245 -85647067 - L1_Mus1 LINE L1 0 6567 6155 2 849 372 239 11 0 chr13 34637532 34637620 -85646692 + L1MB2 LINE L1 6053 6141 -30 2 849 389 285 54 103 chr13 34638634 34638818 -85645494 + MTEb LTR MaLR 205 379 0 2 849 471 208 0 28 chr13 34638831 34638940 -85645372 + MTD LTR MaLR 314 419 0 2 849 404 313 0 114 chr13 34639084 34639233 -85645079 + MTD LTR MaLR 42 169 -250 2 849 584 266 59 45 chr13 34639233 34639455 -85644857 + RLTR15 LTR ERVK 1 216 -143 2 849 315 71 0 0 chr13 34639455 34639497 -85644815 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 849 315 0 0 0 chr13 34639497 34639531 -85644781 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 849 584 266 59 45 chr13 34639531 34639594 -85644718 + RLTR15 LTR ERVK 217 290 -69 2 849 887 189 139 7 chr13 34639642 34639880 -85644432 + MTD LTR MaLR 137 405 -14 2 849 2306 292 103 15 chr13 34639925 34640770 -85643542 + MTE-int LTR MaLR 610 1528 -52 2 849 555 292 12 24 chr13 34640783 34640948 -85643364 + ORR1E LTR MaLR 11 173 -186 2 849 247 314 0 14 chr13 34641268 34641339 -85642973 - ID4_ SINE ID -8 75 6 2 849 1776 208 58 3 chr13 34641540 34641921 -85642391 - MTD LTR MaLR 0 419 18 2 849 252 0 0 0 chr13 34642265 34642293 -85642019 + (A)n Simple_repeat Simple_repeat 1 28 0 2 849 687 261 38 5 chr13 34642833 34643018 -85641294 + RCHARR1 DNA MER1_type 28 218 -756 2 849 6088 32 3 7 chr13 34643267 34643986 -85640326 - L1Md_F2 LINE L1 0 6582 5867 2 849 267 306 51 0 chr13 34644754 34644852 -85639460 - MLT1L LTR MaLR -363 247 145 2 849 2485 93 16 0 chr13 34645724 34646046 -85638266 + ORR1A2 LTR MaLR 1 327 0 2 849 770 214 139 110 chr13 34646595 34646941 -85637371 + ORR1E LTR MaLR 2 357 -2 2 849 702 310 23 94 chr13 34646976 34647318 -85636994 - ORR1E LTR MaLR -41 318 1 2 849 186 143 0 0 chr13 34647426 34647461 -85636851 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2 849 276 280 37 59 chr13 34648160 34648307 -85636005 - MIRb SINE MIR -117 145 10 2 849 1702 162 33 100 chr13 34649793 34650184 -85634128 + ORR1C1 LTR MaLR 2 366 -12 2 849 366 301 64 86 chr13 34650620 34650660 -85633652 + B4 SINE B4 1 41 -251 2 849 1309 214 107 26 chr13 34650660 34651006 -85633306 - ORR1D1 LTR MaLR 0 374 1 2 849 366 301 64 86 chr13 34651006 34651198 -85633114 + B4 SINE B4 42 228 -64 2 849 240 226 192 80 chr13 34651259 34651384 -85632928 + RLTR24 LTR ERV1 391 529 0 2 849 396 0 0 0 chr13 34651418 34651462 -85632850 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 849 701 232 51 56 chr13 34651500 34651696 -85632616 - RMER19B LTR ERVK -348 554 360 2 849 2271 208 152 67 chr13 34651894 34652714 -85631598 + RMER19B LTR ERVK 1 890 -12 2 849 257 209 57 25 chr13 34652789 34652946 -85631366 + (TA)n Simple_repeat Simple_repeat 2 163 0 2 849 617 204 53 0 chr13 34652998 34653130 -85631182 - B1_Mus1 SINE Alu 0 148 10 2 849 1437 219 53 12 chr13 34653462 34653804 -85630508 + Lx8 LINE L1 6895 7250 -223 2 849 409 209 163 95 chr13 34654280 34654349 -85629963 + Lx8 LINE L1 7264 7355 -118 2 849 186 43 0 0 chr13 34654349 34654372 -85629940 + (GA)n Simple_repeat Simple_repeat 2 24 0 2 849 409 209 163 95 chr13 34654372 34654492 -85629820 + Lx8 LINE L1 7356 7466 -7 2 849 301 296 92 0 chr13 34654773 34654871 -85629441 - PB1D10 SINE Alu -10 107 1 2 849 423 0 0 0 chr13 34655730 34655777 -85628535 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 849 470 284 110 50 chr13 34657350 34657750 -85626562 + L1MD LINE L1 3929 4352 -1794 2 849 3597 15 0 0 chr13 34658005 34658406 -85625906 + L1Md_A LINE L1 6181 6581 -1 2 849 195 42 0 0 chr13 34658409 34658433 -85625879 + (A)n Simple_repeat Simple_repeat 1 24 0 2 849 511 323 39 0 chr13 34658759 34658914 -85625398 + Tigger7 DNA MER2_type 163 323 -2168 2 849 1217 226 94 41 chr13 34658917 34659262 -85625050 - MTE2a LTR MaLR 0 379 49 2 849 236 290 92 171 chr13 34660045 34660449 -85623863 - MLT1A1 LTR MaLR -34 374 3 2 849 286 311 53 26 chr13 34660555 34660707 -85623605 + LTR33A_ LTR ERVL 371 526 -5 2 849 455 310 23 0 chr13 34660747 34660876 -85623436 - MER2B DNA MER2_type -7 329 198 2 849 501 236 108 103 chr13 34661561 34661755 -85622557 + B3A SINE B2 1 195 -3 2 849 354 300 9 9 chr13 34661773 34661884 -85622428 - L1MA7 LINE L1 -11 6280 6170 2 849 382 279 0 0 chr13 34662048 34662127 -85622185 + ID4_ SINE ID 4 82 -1 2 849 496 275 47 51 chr13 34662481 34662696 -85621616 - L1MB7 LINE L1 -47 6137 5924 2 849 264 317 0 0 chr13 34663335 34663424 -85620888 - L1M4 LINE L1 -2006 4140 4052 2 849 195 296 0 0 chr13 34663431 34663475 -85620837 - L2 LINE L2 -711 2708 2665 2 849 870 246 127 37 chr13 34663608 34663962 -85620350 + RMER15 LTR ERVL 190 575 0 2 849 239 311 118 12 chr13 34663963 34664132 -85620180 - L2 LINE L2 -752 2667 2481 2 849 264 30 0 0 chr13 34664334 34664367 -85619945 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 849 267 231 0 0 chr13 34665011 34665076 -85619236 + B3 SINE B2 152 216 0 2 849 423 16 31 15 chr13 34665207 34665272 -85619040 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 849 319 280 104 0 chr13 34665651 34665776 -85618536 - L1MD3 LINE L1 -125 7870 7733 2 849 515 263 100 58 chr13 34665875 34666065 -85618247 + B3A SINE B2 1 198 0 2 849 242 237 0 13 chr13 34666133 34666210 -85618102 + T-rich Low_complexity Low_complexity 5 80 0 2 849 582 82 0 0 chr13 34666206 34666291 -85618021 + (TC)n Simple_repeat Simple_repeat 1 85 0 2 849 291 311 22 22 chr13 34666393 34666485 -85617827 - B3 SINE B2 -23 193 102 2 849 234 0 0 0 chr13 34666891 34666917 -85617395 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 849 594 0 0 0 chr13 34667010 34667076 -85617236 + (TCCC)n Simple_repeat Simple_repeat 3 68 0 2 849 541 286 140 38 chr13 34667314 34667579 -85616733 - MLT1F2 LTR MaLR -2 558 267 2 849 402 269 0 53 chr13 34668837 34668951 -85615361 + PB1D10 SINE Alu 10 117 0 2 849 3675 155 48 14 chr13 34669081 34669743 -85614569 + Lx7 LINE L1 3582 4266 -1614 2 849 2417 164 84 53 chr13 34670201 34670422 -85613890 + Lx7 LINE L1 4262 4513 -1367 2 849 1147 78 0 0 chr13 34670422 34670563 -85613749 + B1_Mm SINE Alu 1 141 -6 2 849 2417 164 84 53 chr13 34670563 34670889 -85613423 + Lx7 LINE L1 4514 4826 -1054 2 849 32395 108 19 18 chr13 34670884 34677241 -85607071 - L1_Mus1 LINE L1 -1 6581 184 2 849 5068 165 77 31 chr13 34677253 34677471 -85606841 + Lx7 LINE L1 4822 5051 -829 2 849 3565 36 0 2 chr13 34677471 34677891 -85606421 - L1Md_F3 LINE L1 -1 6583 6165 2 849 5068 178 72 26 chr13 34677891 34679047 -85605265 + Lx7 LINE L1 5052 6248 -1448 2 849 2426 95 3 0 chr13 34679047 34679373 -85604939 + ORR1A2 LTR MaLR 1 327 0 3 849 4483 206 60 16 chr13 34679373 34679654 -85604658 + Lx7 LINE L1 6249 6553 -1143 2 849 267 31 0 0 chr13 34679655 34679687 -85604625 + (T)n Simple_repeat Simple_repeat 1 32 0 3 849 2198 102 112 12 chr13 34679687 34680156 -85604156 - RLTR1B LTR ERV1 -72 552 1 3 849 13067 64 60 22 chr13 34680156 34682954 -85601358 - RLTR1B-int LTR ERV1 0 3299 1 3 849 1188 45 6 0 chr13 34682954 34683111 -85601201 - RLTR1B LTR ERV1 0 512 355 3 849 5071 211 42 28 chr13 34683111 34683935 -85600377 + Lx7 LINE L1 6544 7378 -318 2 849 324 0 0 0 chr13 34683935 34683971 -85600341 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 849 5071 211 42 28 chr13 34683971 34684277 -85600035 + Lx7 LINE L1 7379 7688 -8 2 849 6016 57 20 8 chr13 34684271 34685032 -85599280 - L1Md_F2 LINE L1 -26 6556 5787 3 849 227 304 12 37 chr13 34685901 34685983 -85598329 + MIRb SINE MIR 50 129 -139 3 849 840 156 285 201 chr13 34686434 34686788 -85597524 + ORR1C2 LTR MaLR 1 384 0 3 849 23 0 0 0 chr13 34687217 34687240 -85597072 + AT_rich Low_complexity Low_complexity 1 23 0 3 849 2070 212 98 10 chr13 34687709 34688199 -85596113 - MT2A LTR ERVL 0 533 1 3 849 727 298 138 93 chr13 34689237 34689340 -85594972 + L1MC4a LINE L1 6510 6643 -1239 3 849 672 103 0 0 chr13 34689340 34689447 -85594865 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 3 849 727 298 138 93 chr13 34689447 34690344 -85593968 + L1MC4a LINE L1 6644 7554 -328 3 849 657 250 19 6 chr13 34690344 34690505 -85593807 + RSINE1 SINE B4 3 165 0 3 849 447 19 0 0 chr13 34690872 34690924 -85593388 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 849 615 14 0 0 chr13 34690924 34690995 -85593317 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 849 468 51 0 0 chr13 34691275 34691334 -85592978 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 3 849 357 75 0 0 chr13 34691513 34691566 -85592746 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 849 3798 99 42 9 chr13 34692268 34692817 -85591495 + RMER2 LTR ERV1 1 567 0 3 849 435 369 73 17 chr13 34692817 34693104 -85591208 + MER21B LTR ERV1 50 352 -511 3 849 500 369 30 26 chr13 34693578 34693848 -85590464 + MER21B LTR ERV1 468 738 -125 3 849 252 316 354 40 chr13 34693932 34694242 -85590070 - RMER5 LTR ERV1 -76 458 52 3 849 756 214 103 146 chr13 34694490 34694840 -85589472 + RLTR18 LTR ERVK 5 339 -277 3 849 1425 208 31 19 chr13 34694855 34695178 -85589134 + RLTR18B LTR ERVK 186 512 0 3 849 250 338 52 8 chr13 34695414 34695548 -85588764 - MIR SINE MIR -66 196 57 3 849 300 200 0 0 chr13 34696803 34696868 -85587444 + (CA)n Simple_repeat Simple_repeat 1 65 0 3 849 749 115 0 16 chr13 34697600 34697724 -85586588 + (GGGAGA)n Simple_repeat Simple_repeat 3 124 0 3 849 221 344 0 0 chr13 34698315 34698411 -85585901 + (TATATG)n Simple_repeat Simple_repeat 1 96 0 3 849 337 290 129 0 chr13 34698412 34698536 -85585776 - Tigger5 DNA MER2_type -2215 191 52 3 849 180 0 0 0 chr13 34699147 34699167 -85585145 + (T)n Simple_repeat Simple_repeat 1 20 0 3 849 499 273 8 15 chr13 34700480 34700610 -85583702 - ID_B1 SINE B4 0 224 96 3 849 791 316 29 40 chr13 34700649 34700923 -85583389 + B4A SINE B4 8 278 -14 3 849 592 232 6 6 chr13 34700997 34701175 -85583137 + GA-rich Low_complexity Low_complexity 2 179 0 3 849 325 294 0 0 chr13 34701383 34701468 -85582844 + MTEa LTR MaLR 3 87 -272 3 849 408 149 62 41 chr13 34701511 34701636 -85582676 + MTEa LTR MaLR 193 336 -43 3 849 1386 101 0 5 chr13 34702301 34702491 -85581821 - B2_Mm2 SINE B2 -6 189 1 3 849 207 202 0 0 chr13 34702566 34702655 -85581657 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 3 849 917 190 32 11 chr13 34702680 34702866 -85581446 - Lx9 LINE L1 -697 6947 6758 3 849 1370 195 54 46 chr13 34702865 34703214 -85581098 + Lx9 LINE L1 7291 7642 -2 3 849 29398 22 0 0 chr13 34704982 34708358 -85575954 + L1Md_A LINE L1 2211 5586 -297 3 849 8987 14 0 0 chr13 34708358 34709354 -85574958 + L1Md_A LINE L1 5587 6582 0 3 849 8324 48 0 0 chr13 34709382 34710378 -85573934 + L1Md_T LINE L1 5587 6582 0 3 849 704 252 74 9 chr13 34711300 34711572 -85572740 + MLT1A1 LTR MaLR 72 407 -1 3 849 292 186 71 0 chr13 34711650 34711720 -85572592 + L2 LINE L2 2837 2911 -508 3 849 1157 62 0 0 chr13 34712455 34712600 -85571712 + B1_Mm SINE Alu 3 147 0 3 849 26 0 0 0 chr13 34712609 34712635 -85571677 + AT_rich Low_complexity Low_complexity 1 26 0 3 849 705 188 60 72 chr13 34712777 34712943 -85571369 + RSINE1 SINE B4 2 165 0 3 849 521 350 0 0 chr13 34713429 34713572 -85570740 - RSINE1 SINE B4 -17 148 6 3 849 502 278 0 17 chr13 34714641 34714758 -85569554 + PB1D10 SINE Alu 2 116 -1 3 849 432 147 40 0 chr13 34714758 34714833 -85569479 + ID4 SINE ID 2 79 -4 3 849 383 242 69 46 chr13 34715109 34715239 -85569073 + MER74A LTR ERVL 43 175 -447 3 849 552 291 71 5 chr13 34715242 34715453 -85568859 + MER74A LTR ERVL 154 378 -180 3 849 1759 250 100 70 chr13 34715693 34716395 -85567917 + RMER19B LTR ERVK 1 723 -179 3 849 2655 109 66 101 chr13 34716390 34716953 -85567359 - RLTR18 LTR ERVK -73 543 1 3 849 4202 70 5 14 chr13 34717102 34717664 -85566648 - L1Md_F2 LINE L1 -9 6573 6017 3 849 218 292 15 0 chr13 34718316 34718381 -85565931 + PB1D10 SINE Alu 20 85 -32 3 849 436 345 38 43 chr13 34718465 34718650 -85565662 - ID_B1 SINE B4 -10 214 31 3 849 392 194 25 100 chr13 34719119 34719239 -85565073 - PB1D9 SINE Alu -1 119 9 3 849 22 35 0 0 chr13 34719725 34719754 -85564558 + AT_rich Low_complexity Low_complexity 1 29 0 3 849 1024 162 124 53 chr13 34721939 34722148 -85562164 + URR1A DNA MER1_type 3 226 0 3 849 1605 289 86 4 chr13 34722413 34722923 -85561389 + Lx8 LINE L1 6826 7377 -96 3 849 21 0 0 0 chr13 34722959 34722980 -85561332 + AT_rich Low_complexity Low_complexity 1 21 0 3 849 567 315 56 11 chr13 34723679 34723950 -85560362 - MER2 DNA MER2_type -40 305 1 3 849 1344 248 69 6 chr13 34725888 34726221 -85558091 + ORR1E LTR MaLR 5 358 -1 3 849 277 206 59 0 chr13 34726751 34726819 -85557493 - ID2 SINE ID -10 73 2 3 849 240 327 99 28 chr13 34726872 34727155 -85557157 - L1MC4a LINE L1 -27 7968 7666 3 849 343 276 24 84 chr13 34727374 34727540 -85556772 - L1MC4a LINE L1 -583 7299 7144 3 849 493 221 16 141 chr13 34728625 34728746 -85555566 + B1F SINE Alu 12 117 0 3 849 23 0 0 0 chr13 34728746 34728769 -85555543 + AT_rich Low_complexity Low_complexity 1 23 0 3 849 940 225 9 36 chr13 34729039 34729260 -85555052 + B3 SINE B2 1 215 -1 3 849 1141 317 141 28 chr13 34731106 34731672 -85552640 - MER44C DNA MER2_type -21 712 83 3 849 1356 70 43 0 chr13 34732693 34732879 -85551433 - B2_Mm2 SINE B2 0 195 2 3 849 228 214 0 0 chr13 34732987 34733043 -85551269 + CT-rich Low_complexity Low_complexity 4 59 0 3 106 1378 227 132 9 chr13 34734034 34734359 -85549953 + ORR1D2 LTR MaLR 1 365 -5 3 850 452 204 216 26 chr13 34735302 34735418 -85548894 + B1_Mur1 SINE Alu 5 142 -7 3 850 268 250 17 0 chr13 34736857 34736871 -85547441 + B4A SINE B4 71 85 -207 3 850 311 188 0 0 chr13 34736871 34736919 -85547393 + B1F1 SINE Alu 1 48 -101 3 850 180 176 0 0 chr13 34738033 34738067 -85546245 + GA-rich Low_complexity Low_complexity 3 36 0 3 850 299 273 26 0 chr13 34738669 34738746 -85545566 + ID4_ SINE ID 1 79 -4 3 850 192 77 0 0 chr13 34739596 34739622 -85544690 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 3 850 198 0 0 0 chr13 34741343 34741365 -85542947 + (A)n Simple_repeat Simple_repeat 1 22 0 3 850 22 80 0 0 chr13 34744304 34744354 -85539958 + GC_rich Low_complexity Low_complexity 1 50 0 3 850 298 298 31 21 chr13 34745968 34746064 -85538248 + B1F2 SINE Alu 12 108 -41 3 850 324 0 0 0 chr13 34746064 34746100 -85538212 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 850 446 238 19 19 chr13 34746128 34746231 -85538081 - PB1D10 SINE Alu -3 114 12 3 850 1417 274 99 28 chr13 34746698 34747205 -85537107 + Lx8 LINE L1 6572 7114 -359 3 850 225 0 0 0 chr13 34747279 34747304 -85537008 + (A)n Simple_repeat Simple_repeat 1 25 0 3 850 201 320 0 0 chr13 34747744 34747819 -85536493 + T-rich Low_complexity Low_complexity 1 75 0 3 850 283 279 25 12 chr13 34749468 34749548 -85534764 - MTEa LTR MaLR -4 375 295 3 850 259 283 83 28 chr13 34749628 34749737 -85534575 - MTEa LTR MaLR -242 117 3 3 850 555 280 8 8 chr13 34750102 34750235 -85534077 + B1_Mur1 SINE Alu 2 134 -15 3 850 1033 194 242 31 chr13 34750470 34750803 -85533509 + MTD LTR MaLR 3 405 -14 3 850 532 255 182 0 chr13 34750815 34751007 -85533305 - MER2 DNA MER2_type -49 296 70 3 850 304 353 16 40 chr13 34751124 34751248 -85533064 + PB1 SINE Alu 1 121 -6 3 850 214 349 0 0 chr13 34751269 34751335 -85532977 + ID4_ SINE ID 7 72 -11 3 850 265 269 24 60 chr13 34752674 34752757 -85531555 - L4 LINE RTE -1290 739 660 3 850 1408 235 72 23 chr13 34754098 34754446 -85529866 - ORR1D2 LTR MaLR 0 370 6 3 850 226 262 40 151 chr13 34755333 34755459 -85528853 + LTR85c LTR Gypsy? 388 499 -324 3 850 1054 252 132 21 chr13 34755419 34755785 -85528527 - MER44B DNA MER2_type -36 514 157 3 850 2279 138 11 14 chr13 34756129 34756491 -85527821 + ORR1B1 LTR MaLR 5 356 -23 3 850 489 319 54 48 chr13 34756568 34756980 -85527332 - RLTR12B LTR ERVK -65 294 9 3 850 394 255 0 27 chr13 34757339 34757488 -85526824 + (TATG)n Simple_repeat Simple_repeat 2 146 0 3 850 322 242 0 0 chr13 34758360 34758422 -85525890 - ID4_ SINE ID -17 66 5 3 850 262 186 14 22 chr13 34758427 34758491 -85525821 - PB1 SINE Alu -3 124 52 3 850 285 29 0 0 chr13 34758562 34758596 -85525716 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 850 240 21 40 60 chr13 34759378 34759428 -85524884 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 3 850 2409 144 16 48 chr13 34760032 34760469 -85523843 - RLTR1D LTR ERV1 -16 589 167 3 850 1261 189 120 14 chr13 34760504 34760856 -85523456 - MTD LTR MaLR -3 416 1 3 850 23 33 0 0 chr13 34761356 34761386 -85522926 + AT_rich Low_complexity Low_complexity 1 30 0 4 850 387 56 0 0 chr13 34762885 34762939 -85521373 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 850 279 205 62 37 chr13 34764179 34764260 -85520052 + MLT1A1 LTR MaLR 314 396 -12 4 850 289 288 0 0 chr13 34764926 34764992 -85519320 + ID4 SINE ID 2 67 -16 4 850 257 237 11 126 chr13 34765556 34765643 -85518669 + BC1_Mm scRNA scRNA 34 110 -42 4 850 981 76 0 8 chr13 34765781 34765914 -85518398 + URR1B DNA MER1_type 94 225 0 4 850 213 39 0 0 chr13 34765925 34765951 -85518361 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 850 884 148 0 7 chr13 34765954 34766090 -85518222 - B1_Mur3 SINE Alu -13 136 2 4 850 247 307 17 17 chr13 34766508 34766624 -85517688 + (TG)n Simple_repeat Simple_repeat 2 117 0 4 850 266 271 22 56 chr13 34766573 34766753 -85517559 + (TATG)n Simple_repeat Simple_repeat 4 177 0 4 850 972 280 170 32 chr13 34769896 34769907 -85514405 - L1MB3 LINE L1 -219 5964 5955 4 850 225 0 0 0 chr13 34769907 34769932 -85514380 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 850 972 280 170 32 chr13 34769932 34770025 -85514287 - L1MB3 LINE L1 -229 5954 5856 4 850 1213 260 16 32 chr13 34770025 34770399 -85513913 - ORR1D2 LTR MaLR -1 369 2 4 850 972 280 170 32 chr13 34770399 34770519 -85513793 - L1MB3 LINE L1 -328 5855 5686 4 850 1111 91 0 0 chr13 34770519 34770662 -85513650 + B1_Mus1 SINE Alu 1 143 -5 4 850 257 51 0 25 chr13 34770662 34770702 -85513610 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 850 972 280 170 32 chr13 34770702 34770969 -85513343 - L1MB3 LINE L1 -498 5685 5403 4 850 264 300 0 0 chr13 34771028 34771088 -85513224 - tRNA-Ala-GCY_ tRNA tRNA -13 62 3 4 850 468 283 45 100 chr13 34771975 34772254 -85512058 + MTEa LTR MaLR 73 371 -8 4 850 402 186 147 11 chr13 34772209 34772399 -85511913 + RMER17A LTR ERVK 201 416 -335 4 850 2301 176 31 9 chr13 34772778 34773197 -85511115 + RLTR20B3 LTR ERVK 1 428 -149 4 850 252 0 0 0 chr13 34773209 34773237 -85511075 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 850 450 0 0 0 chr13 34773237 34773286 -85511026 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 850 344 246 14 0 chr13 34773286 34773355 -85510957 + RLTR20B3 LTR ERVK 488 557 -20 4 850 541 295 118 11 chr13 34773466 34773644 -85510668 - B4A SINE B4 -95 197 1 4 850 255 250 105 32 chr13 34774227 34774322 -85509990 - MIR SINE MIR -91 171 70 4 850 786 276 54 57 chr13 34775103 34775434 -85508878 + RMER15 LTR ERVL 246 575 0 4 850 189 0 0 0 chr13 34775874 34775895 -85508417 + (A)n Simple_repeat Simple_repeat 1 21 0 4 850 225 269 29 15 chr13 34776008 34776076 -85508236 - ID4_ SINE ID -13 70 2 4 850 2189 244 102 92 chr13 34776148 34776997 -85507315 - RMER13A LTR ERVK -2 858 1 4 850 2309 158 57 16 chr13 34777582 34778006 -85506306 + Lx4A LINE L1 6617 7057 -1 4 850 186 370 97 7 chr13 34778142 34778297 -85506015 + MER5B DNA MER1_type 7 175 -3 4 850 291 217 0 16 chr13 34778511 34778572 -85505740 + MTEa LTR MaLR 1 60 -319 4 850 365 260 52 10 chr13 34778571 34778668 -85505644 + PB1D7 SINE Alu 8 108 -12 4 850 440 243 0 26 chr13 34779036 34779150 -85505162 + ID_B1 SINE B4 113 223 -1 4 850 503 165 0 19 chr13 34779223 34779328 -85504984 + (CATATA)n Simple_repeat Simple_repeat 6 108 0 4 850 194 0 0 37 chr13 34779582 34779609 -85504703 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 850 326 258 10 10 chr13 34780948 34781046 -85503266 + PB1D10 SINE Alu 11 108 -9 4 850 316 289 0 0 chr13 34782103 34782180 -85502132 + ID4 SINE ID 14 90 -62 4 850 993 113 0 0 chr13 34782574 34782724 -85501588 + (GGGAA)n Simple_repeat Simple_repeat 3 152 0 4 850 201 196 0 0 chr13 34783329 34783375 -85500937 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 4 850 181 392 0 0 chr13 34784082 34784156 -85500156 + MIRb SINE MIR 26 99 -169 4 850 309 229 144 10 chr13 34784158 34784217 -85500095 + PB1D10 SINE Alu 2 63 -54 4 850 264 77 0 0 chr13 34784217 34784256 -85500056 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 850 309 229 144 10 chr13 34784256 34784293 -85500019 + PB1D10 SINE Alu 64 111 -6 4 850 213 39 0 0 chr13 34784295 34784321 -85499991 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 850 244 348 56 0 chr13 34785108 34785197 -85499115 - MER117 DNA MER1_type -33 164 71 4 850 367 338 58 22 chr13 34785722 34785946 -85498366 + MLT1L LTR MaLR 368 599 -11 4 850 522 316 134 53 chr13 34786038 34786409 -85497903 + MLT1N2 LTR MaLR 137 533 -29 4 850 570 254 255 30 chr13 34786409 34786742 -85497570 - MLT1A1 LTR MaLR 0 408 1 4 850 522 316 134 53 chr13 34786742 34786764 -85497548 + MLT1N2 LTR MaLR 534 561 -1 4 850 631 266 0 0 chr13 34787695 34787823 -85496489 + B3A SINE B2 1 128 -70 4 850 276 91 0 0 chr13 34787854 34787898 -85496414 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 850 28 48 0 0 chr13 34787904 34787946 -85496366 + AT_rich Low_complexity Low_complexity 1 42 0 4 850 245 331 71 0 chr13 34788181 34788308 -85496004 - MER63B DNA AcHobo 0 436 301 4 850 351 258 46 46 chr13 34788472 34788602 -85495710 + BC1_Mm scRNA scRNA 2 131 -21 4 850 213 294 11 45 chr13 34789243 34789332 -85494980 - L2b LINE L2 -1 3374 3289 4 850 3101 93 0 12 chr13 34790100 34790512 -85493800 + MTB_Mm LTR MaLR 1 407 0 4 850 1430 72 17 0 chr13 34790826 34791007 -85493305 + B2_Mm2 SINE B2 2 185 -10 4 850 913 325 75 8 chr13 34792249 34792373 -85491939 - L1MA4 LINE L1 -1567 5906 5772 4 850 315 0 0 0 chr13 34792373 34792408 -85491904 + (TAA)n Simple_repeat Simple_repeat 2 36 0 4 850 913 323 66 3 chr13 34792408 34792745 -85491567 - L1MA4 LINE L1 -494 5806 5421 4 850 573 165 126 10 chr13 34792991 34793155 -85491157 - MTD LTR MaLR -14 405 221 4 850 209 57 0 28 chr13 34793513 34793549 -85490763 + (TTGTG)n Simple_repeat Simple_repeat 3 37 0 4 850 669 188 141 0 chr13 34793549 34793677 -85490635 - B1_Mur2 SINE Alu 0 149 4 4 850 883 182 58 11 chr13 34793731 34793920 -85490392 - B3 SINE B2 -18 198 1 4 850 243 0 0 0 chr13 34793989 34794016 -85490296 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 4 850 255 215 106 11 chr13 34794248 34794342 -85489970 - L1_Mur3 LINE L1 -423 5457 5355 4 850 1723 186 89 26 chr13 34794359 34794747 -85489565 - MTD LTR MaLR -14 405 6 4 850 391 299 123 60 chr13 34794775 34795174 -85489138 - L1MA4 LINE L1 -779 5364 4941 4 850 303 93 0 0 chr13 34795219 34795262 -85489050 + (ATTG)n Simple_repeat Simple_repeat 3 45 0 4 850 428 0 19 0 chr13 34795613 34795665 -85488647 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 4 850 244 277 95 12 chr13 34795881 34795965 -85488347 + L1ME3 LINE L1 6031 6121 -41 4 850 432 241 16 72 chr13 34796393 34796518 -85487794 - RSINE1 SINE B4 -22 143 26 4 850 227 299 49 41 chr13 34796747 34796869 -85487443 - MER34A1 LTR ERV1 -71 516 394 4 850 252 163 0 39 chr13 34797015 34797066 -85487246 - MER57A-int LTR ERV1 -5034 1153 1105 4 850 25 83 0 0 chr13 34797104 34797164 -85487148 + AT_rich Low_complexity Low_complexity 1 60 0 4 850 2655 125 150 29 chr13 34797855 34798447 -85485865 - RMER6A LTR ERVK -91 665 2 4 850 270 0 0 0 chr13 34798875 34798905 -85485407 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 850 239 280 0 0 chr13 34799030 34799080 -85485232 + polypurine Low_complexity Low_complexity 1 50 0 4 850 234 301 17 83 chr13 34799944 34800125 -85484187 + MLT1A0 LTR MaLR 1 169 -196 4 850 375 229 10 10 chr13 34801218 34801315 -85482997 + PB1D10 SINE Alu 20 116 -1 4 850 490 316 32 0 chr13 34801996 34802154 -85482158 + MER2 DNA MER2_type 183 345 0 4 850 1835 211 68 47 chr13 34802189 34802705 -85481607 - RLTR11A2 LTR ERVK 0 527 1 4 850 200 286 138 35 chr13 34802899 34803015 -85481297 - MIRc SINE MIR -122 146 19 4 850 607 286 28 6 chr13 34803193 34803369 -85480943 + B3A SINE B2 1 180 -18 4 850 865 143 16 19 chr13 34803799 34804106 -85480206 + (TATG)n Simple_repeat Simple_repeat 1 306 0 4 850 371 272 15 113 chr13 34804107 34804161 -85480151 - MTEb LTR MaLR 0 379 326 4 850 495 0 0 0 chr13 34804161 34804216 -85480096 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 4 850 371 272 15 113 chr13 34804216 34804364 -85479948 - MTEb LTR MaLR -54 325 198 4 850 228 35 0 0 chr13 34804378 34804407 -85479905 + (TC)n Simple_repeat Simple_repeat 1 29 0 4 850 441 265 0 8 chr13 34804778 34804896 -85479416 - PB1D10 SINE Alu 0 117 1 4 850 329 234 0 13 chr13 34805779 34805857 -85478455 + MLT1H2 LTR MaLR 369 445 -44 4 850 464 335 27 0 chr13 34806379 34806567 -85477745 + RMER15 LTR ERVL 379 571 -4 4 850 622 314 48 30 chr13 34806900 34807169 -85477143 + RMER15-int LTR ERVL 356 629 -4370 4 850 753 270 77 57 chr13 34807328 34807681 -85476631 + RMER15-int LTR ERVL 1272 1631 -3368 4 850 890 313 18 50 chr13 34808201 34808483 -85475829 + RMER15-int LTR ERVL 1941 2213 -2786 4 850 567 296 71 54 chr13 34808502 34808741 -85475571 + RMER15-int LTR ERVL 2306 2548 -2451 4 850 1129 96 0 0 chr13 34808772 34808918 -85475394 + B1_Mus1 SINE Alu 3 148 0 4 850 714 159 0 0 chr13 34808918 34809044 -85475268 + GA-rich Low_complexity Low_complexity 2 127 0 4 850 942 320 120 64 chr13 34809044 34810019 -85474293 + Lx8 LINE L1 6192 7221 -252 4 850 570 304 12 0 chr13 34810025 34810186 -85474126 + RMER15 LTR ERVL 376 538 -37 4 850 186 43 0 0 chr13 34810791 34810814 -85473498 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 850 270 0 0 0 chr13 34811251 34811281 -85473031 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 850 385 292 165 41 chr13 34811626 34811869 -85472443 + MLT1H-int LTR MaLR 641 913 -496 4 850 254 261 41 55 chr13 34812755 34812828 -85471484 + B1F2 SINE Alu 10 81 -68 4 850 1252 19 13 0 chr13 34812833 34812988 -85471324 + (GA)n Simple_repeat Simple_repeat 2 158 0 4 850 186 338 15 0 chr13 34813438 34813506 -85470806 - MER5B DNA MER1_type -8 170 102 4 850 344 22 22 0 chr13 34815003 34815048 -85469264 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 850 207 0 0 0 chr13 34817103 34817126 -85467186 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 4 850 391 261 36 9 chr13 34817476 34817588 -85466724 + PB1D10 SINE Alu 1 115 -2 4 850 913 218 35 5 chr13 34818767 34818970 -85465342 + B3 SINE B2 3 211 -5 4 850 601 275 64 0 chr13 34819020 34819191 -85465121 + B3A SINE B2 1 182 -16 4 850 345 289 41 16 chr13 34819252 34819375 -85464937 - ORR1E LTR MaLR -224 135 10 5 850 402 283 241 6 chr13 34820066 34820240 -85464072 - ID_B1 SINE B4 -6 218 4 5 850 539 273 8 0 chr13 34820533 34820654 -85463658 + ID_B1 SINE B4 82 203 -21 5 850 360 273 116 20 chr13 34820731 34820877 -85463435 + RMER30 DNA MER1_type 2 161 -41 5 850 512 338 118 2 chr13 34820920 34821318 -85462994 - L1MA4 LINE L1 -105 6195 5752 5 850 622 337 19 8 chr13 34821348 34821611 -85462701 - L1MB3 LINE L1 -67 6116 5851 5 850 436 352 22 0 chr13 34821883 34822062 -85462250 - RMER15 LTR ERVL -46 529 347 5 850 2143 281 61 63 chr13 34822307 34822599 -85461713 - RMER15-int LTR ERVL -7 4992 4705 5 850 386 20 0 19 chr13 34822599 34822651 -85461661 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 850 2143 281 61 63 chr13 34822651 34823198 -85461114 - RMER15-int LTR ERVL -295 4704 4157 5 850 1169 95 6 0 chr13 34823201 34823370 -85460942 - B2_Mm2 SINE B2 -25 170 1 5 850 1786 299 101 83 chr13 34823468 34824604 -85459708 - RMER15-int LTR ERVL -1501 3498 2342 5 850 463 291 50 0 chr13 34824653 34824794 -85459518 - RMER15-int LTR ERVL -3640 1359 1212 5 850 289 300 144 0 chr13 34825428 34825518 -85458794 - RMER15-int LTR ERVL -4669 330 228 5 850 225 263 0 0 chr13 34825929 34825986 -85458326 + 4.5SRNA scRNA scRNA 32 88 -6 5 850 427 130 0 49 chr13 34825936 34826017 -85458295 + PB1D10 SINE Alu 41 117 0 5 850 917 249 110 48 chr13 34827048 34827403 -85456909 - MTEa LTR MaLR -2 377 1 5 850 774 137 20 0 chr13 34827571 34827717 -85456595 + CT-rich Low_complexity Low_complexity 2 150 0 5 850 289 269 28 37 chr13 34828235 34828343 -85455969 - Arthur1B DNA Tip100 -279 946 840 5 850 359 225 14 0 chr13 34829230 34829301 -85455011 + ID4_ SINE ID 12 83 0 5 850 329 235 23 34 chr13 34829301 34829318 -85454994 + ID_B1 SINE B4 12 98 -126 5 850 429 306 67 88 chr13 34830816 34831146 -85453166 + MTEa LTR MaLR 28 350 -29 5 850 354 273 138 97 chr13 34831412 34831732 -85452580 - ORR1E LTR MaLR -9 350 18 5 850 180 176 0 0 chr13 34832370 34832404 -85451908 + GA-rich Low_complexity Low_complexity 1 34 0 5 850 1048 124 22 28 chr13 34832454 34832636 -85451676 + B2_Mm2 SINE B2 1 181 -14 5 850 457 265 164 20 chr13 34832711 34832961 -85451351 + L1MC LINE L1 5003 5288 -858 5 850 282 227 13 13 chr13 34832976 34833052 -85451260 - Tigger7 DNA MER2_type -2360 131 56 5 850 1076 52 0 7 chr13 34833087 34833222 -85451090 - B1_Mus1 SINE Alu -13 135 2 5 850 855 197 101 0 chr13 34833248 34833436 -85450876 - B3 SINE B2 -9 207 1 5 850 255 157 0 0 chr13 34834012 34834063 -85450249 + CT-rich Low_complexity Low_complexity 3 53 0 5 850 202 382 98 20 chr13 34836561 34836807 -85447505 - L2 LINE L2 -1967 1452 1188 5 850 294 209 0 15 chr13 34840504 34840572 -85443740 + MER5A1 DNA MER1_type 68 134 -32 5 850 885 132 0 0 chr13 34840787 34840931 -85443381 + (TA)n Simple_repeat Simple_repeat 2 145 0 5 850 536 238 105 4 chr13 34841000 34841228 -85443084 - L1MA5 LINE L1 -328 5972 5722 5 850 4455 14 0 12 chr13 34841231 34841730 -85442582 - MT2_Mm LTR ERVL 0 493 1 5 850 321 0 0 0 chr13 34841730 34841768 -85442544 - MERVL-int LTR ERVL 0 5485 5448 5 850 374 123 13 40 chr13 34841768 34841844 -85442468 - ORR1A3-int LTR MaLR -1323 640 567 5 850 48997 16 0 0 chr13 34841844 34847215 -85437097 - MERVL-int LTR ERVL -114 5371 1 5 850 4455 14 0 12 chr13 34847215 34847714 -85436598 - MT2_Mm LTR ERVL 0 493 1 5 850 809 272 45 117 chr13 34847714 34848161 -85436151 - L1MA5 LINE L1 -568 5723 5296 5 850 234 0 0 0 chr13 34848161 34848187 -85436125 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 5 850 802 273 104 28 chr13 34848187 34848528 -85435784 - L1MA5 LINE L1 -848 5295 4937 5 850 369 278 0 9 chr13 34849272 34849381 -85434931 + PB1D10 SINE Alu 5 112 -5 5 850 223 281 47 0 chr13 34849409 34849473 -85434839 + ID4_ SINE ID 5 71 -12 5 850 234 0 0 0 chr13 34850826 34850852 -85433460 + (TCC)n Simple_repeat Simple_repeat 2 27 0 5 850 615 27 0 0 chr13 34850853 34850926 -85433386 + (TC)n Simple_repeat Simple_repeat 2 74 0 5 850 666 182 0 0 chr13 34851042 34851499 -85432813 + (CA)n Simple_repeat Simple_repeat 1 457 0 5 850 284 132 29 0 chr13 34851504 34851572 -85432740 + (CAGAGA)n Simple_repeat Simple_repeat 3 72 0 5 850 300 91 0 0 chr13 34851617 34851661 -85432651 + (T)n Simple_repeat Simple_repeat 1 44 0 5 850 1251 41 0 0 chr13 34851664 34851811 -85432501 - B1_Mus1 SINE Alu 0 148 2 5 850 477 50 0 0 chr13 34853383 34853443 -85430869 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 850 3540 25 0 0 chr13 34853445 34853841 -85430471 - MTA_Mm LTR MaLR 0 396 1 5 850 206 271 0 0 chr13 34853845 34853893 -85430419 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 850 605 294 142 18 chr13 34853997 34854278 -85430034 + MLT1F LTR MaLR 119 434 -114 5 850 928 281 30 66 chr13 34854285 34854535 -85429777 - L1MB8 LINE L1 -37 7001 6760 5 850 180 0 0 0 chr13 34854535 34854555 -85429757 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 850 928 281 30 66 chr13 34854555 34854697 -85429615 - L1MB8 LINE L1 -279 6759 6623 5 850 1017 226 149 73 chr13 34854726 34854997 -85429315 + ORR1D2 LTR MaLR 2 291 -79 5 850 2345 173 35 5 chr13 34854997 34855403 -85428909 + MTC LTR MaLR 4 421 0 5 850 1017 226 149 73 chr13 34855403 34855474 -85428838 + ORR1D2 LTR MaLR 292 370 0 5 850 698 261 134 26 chr13 34855477 34855866 -85428446 - L1MB8 LINE L1 -435 6609 6179 5 850 3019 184 107 43 chr13 34855925 34856646 -85427666 + Lx9 LINE L1 6177 6943 -701 5 850 331 274 116 33 chr13 34856846 34857088 -85427224 - L1MB8 LINE L1 -5141 2193 1932 5 850 674 256 12 18 chr13 34857190 34857353 -85426959 - RSINE1 SINE B4 0 165 4 5 850 760 246 25 20 chr13 34857525 34857728 -85426584 - B3 SINE B2 0 216 13 5 850 540 0 0 0 chr13 34857782 34857842 -85426470 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 850 578 272 52 0 chr13 34857857 34857993 -85426319 - B1_Mur1 SINE Alu 0 149 7 5 850 532 211 53 30 chr13 34858085 34858217 -85426095 - RSINE1 SINE B4 -29 136 2 5 850 241 319 18 0 chr13 34858226 34858339 -85425973 - L1MB8 LINE L1 -4971 1933 1819 5 850 503 313 64 19 chr13 34858431 34858695 -85425617 - L1MB8 LINE L1 -5743 1591 1316 5 850 180 0 0 0 chr13 34858808 34858828 -85425484 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 850 279 0 0 0 chr13 34858828 34858859 -85425453 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 5 850 1160 36 0 28 chr13 34858860 34859004 -85425308 - B1_Mm SINE Alu -6 141 2 5 850 270 222 14 14 chr13 34859018 34859091 -85425221 - L1MB8 LINE L1 -6273 1061 989 5 850 1395 166 6 98 chr13 34859311 34859646 -85424666 - ORR1A4 LTR MaLR -15 314 11 5 850 225 65 0 0 chr13 34860207 34860238 -85424074 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 850 204 67 0 0 chr13 34860533 34860563 -85423749 + (A)n Simple_repeat Simple_repeat 1 30 0 5 850 597 177 28 0 chr13 34861261 34861402 -85422910 + CT-rich Low_complexity Low_complexity 4 148 0 5 850 382 220 5 14 chr13 34861407 34861506 -85422806 - B1_Mus2 SINE Alu -36 113 14 5 850 180 0 0 0 chr13 34861640 34861660 -85422652 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 5 850 2761 68 3 3 chr13 34861671 34862027 -85422285 - L1_Mus2 LINE L1 0 6566 6211 5 850 346 256 139 18 chr13 34862098 34862228 -85422084 + ID_B1 SINE B4 78 222 -2 5 850 421 204 112 15 chr13 34864315 34864449 -85419863 - Tigger7 DNA MER2_type -109 2382 2236 5 850 599 317 66 0 chr13 34864621 34864804 -85419508 - Tigger7 DNA MER2_type -2286 205 11 5 850 420 20 0 0 chr13 34864947 34864996 -85419316 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 851 458 181 183 33 chr13 34867498 34867618 -85416694 + B1_Mur4 SINE Alu 13 150 0 5 851 298 298 138 67 chr13 34867691 34868010 -85416302 + ORR1D2 LTR MaLR 22 342 -28 5 851 5536 156 88 51 chr13 34868754 34870024 -85414288 - RMER12 LTR ERVK 0 1322 6 5 851 473 246 30 8 chr13 34870181 34870312 -85414000 - B1F SINE Alu -2 147 14 5 851 327 337 70 35 chr13 34870339 34870511 -85413801 - MER20 DNA MER1_type -40 179 2 5 851 315 340 95 27 chr13 34870532 34870828 -85413484 + MLT1F LTR MaLR 194 509 -39 5 851 904 289 78 25 chr13 34871018 34871337 -85412975 + MER2 DNA MER2_type 9 344 -1 5 851 290 159 14 0 chr13 34872268 34872337 -85411975 + CT-rich Low_complexity Low_complexity 1 70 0 5 851 712 224 24 12 chr13 34874039 34874206 -85410106 + MTEb LTR MaLR 9 177 -202 5 851 323 331 20 47 chr13 34874212 34874361 -85409951 + RSINE1 SINE B4 4 148 -17 5 851 236 234 0 0 chr13 34874398 34874408 -85409904 + (CA)n Simple_repeat Simple_repeat 1 10 0 5 851 204 40 0 0 chr13 34874408 34874433 -85409879 + (TC)n Simple_repeat Simple_repeat 1 25 0 5 851 236 234 0 0 chr13 34874433 34874469 -85409843 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 851 707 214 31 25 chr13 34874520 34874706 -85409606 + MTEb LTR MaLR 164 371 -8 5 851 1122 97 0 0 chr13 34874706 34874851 -85409461 + B1_Mm SINE Alu 1 145 -2 5 851 315 0 0 0 chr13 34874851 34874886 -85409426 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5 851 297 246 65 16 chr13 34876045 34876169 -85408143 - L1ME4a LINE L1 -254 5870 5741 5 851 462 306 66 63 chr13 34876506 34876862 -85407450 + ORR1E LTR MaLR 11 374 0 5 851 492 172 0 0 chr13 34877215 34877331 -85406981 + (TA)n Simple_repeat Simple_repeat 1 116 0 5 851 2035 115 57 34 chr13 34877364 34877714 -85406598 - RLTR15 LTR ERVK 0 359 2 5 851 570 206 177 55 chr13 34878276 34878440 -85405872 + B3A SINE B2 1 184 -14 5 851 26 50 0 0 chr13 34878445 34878485 -85405827 + AT_rich Low_complexity Low_complexity 1 40 0 5 851 476 268 106 20 chr13 34878755 34878953 -85405359 + MER2 DNA MER2_type 39 253 -92 5 851 373 246 50 42 chr13 34878956 34879075 -85405237 + PB1D7 SINE Alu 1 120 0 5 851 250 231 0 0 chr13 34880542 34880594 -85403718 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 851 522 0 0 0 chr13 34880594 34880652 -85403660 + (GA)n Simple_repeat Simple_repeat 2 59 0 5 851 180 0 0 0 chr13 34881323 34881343 -85402969 + (T)n Simple_repeat Simple_repeat 1 20 0 5 851 1483 247 24 13 chr13 34881530 34881904 -85402408 + MTE2b LTR MaLR 1 378 -1 5 851 1159 247 77 9 chr13 34881946 34882273 -85402039 + MTE2b-int LTR MaLR 26 374 -1206 5 851 556 316 78 25 chr13 34882258 34882501 -85401811 + MTE2b-int LTR MaLR 485 740 -840 5 851 515 307 61 0 chr13 34882481 34882644 -85401668 + MTE2b-int LTR MaLR 1164 1336 -244 5 851 1380 68 11 6 chr13 34882645 34882823 -85401489 - B2_Mm2 SINE B2 -15 180 2 5 851 320 164 0 0 chr13 34882900 34882955 -85401357 + MTE2b LTR MaLR 323 377 -2 5 851 396 150 0 0 chr13 34883008 34883088 -85401224 + (TG)n Simple_repeat Simple_repeat 2 81 0 5 851 1409 45 79 0 chr13 34883224 34883383 -85400929 + B2_Mm1t SINE B2 2 160 -33 5 851 207 0 0 0 chr13 34883383 34883406 -85400906 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 851 1409 45 79 0 chr13 34883406 34883423 -85400889 + B2_Mm1t SINE B2 161 190 -3 5 851 194 292 79 0 chr13 34883862 34883951 -85400361 + L2b LINE L2 3038 3133 -293 5 851 311 352 88 25 chr13 34884239 34884513 -85399799 - MER44A DNA MER2_type -40 299 9 6 851 357 321 0 36 chr13 34884662 34884772 -85399540 + L2b LINE L2 3235 3340 -35 5 851 216 0 0 0 chr13 34885876 34885900 -85398412 + (T)n Simple_repeat Simple_repeat 1 24 0 6 851 182 125 0 48 chr13 34887537 34887579 -85396733 + MIR SINE MIR 216 255 -7 6 851 245 29 29 0 chr13 34887765 34887799 -85396513 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 851 470 240 50 81 chr13 34888195 34888417 -85395895 + MLT1B LTR MaLR 41 255 -135 6 851 503 257 259 13 chr13 34888405 34888629 -85395683 + RLTR11A2 LTR ERVK 249 527 0 6 851 316 354 21 7 chr13 34888648 34888793 -85395519 + MLT1B LTR MaLR 243 389 -1 6 851 973 312 51 23 chr13 34888881 34889275 -85395037 + MLT1A1 LTR MaLR 3 407 -1 6 851 650 301 62 0 chr13 34889836 34890012 -85394300 + B4A SINE B4 106 292 0 6 851 585 0 0 0 chr13 34890015 34890080 -85394232 + (TC)n Simple_repeat Simple_repeat 1 65 0 6 851 702 249 10 36 chr13 34890178 34890370 -85393942 + B4A SINE B4 3 189 -103 6 851 397 259 93 0 chr13 34890378 34890486 -85393826 + RSINE1 SINE B4 2 119 -46 6 851 387 0 0 0 chr13 34890501 34890544 -85393768 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 851 1025 252 64 19 chr13 34891172 34891484 -85392828 - Lx7 LINE L1 -1781 5915 5590 6 851 2085 160 23 21 chr13 34891494 34891883 -85392429 - MTB_Mm LTR MaLR -17 390 1 6 851 920 277 22 12 chr13 34891883 34892205 -85392107 - L1M2 LINE L1 -1396 4747 4423 6 851 279 79 0 0 chr13 34892504 34892542 -85391770 + (TTA)n Simple_repeat Simple_repeat 3 40 0 6 851 1097 128 0 6 chr13 34893936 34894117 -85390195 + (GAA)n Simple_repeat Simple_repeat 1 180 0 6 851 387 316 80 22 chr13 34894123 34894424 -85389888 + MLT1A0 LTR MaLR 7 358 -7 6 851 23 68 0 0 chr13 34894542 34894586 -85389726 + AT_rich Low_complexity Low_complexity 1 44 0 6 851 673 269 92 80 chr13 34895146 34895382 -85388930 + Lx8 LINE L1 5998 6246 -1227 6 851 2771 139 33 44 chr13 34895382 34895833 -85388479 + RLTR41 LTR ERV1 1 446 0 6 851 673 262 98 79 chr13 34895833 34895873 -85388439 + Lx8 LINE L1 6247 6284 -1189 6 851 1014 157 0 0 chr13 34895873 34896051 -85388261 + CT-rich Low_complexity Low_complexity 3 180 0 6 851 673 262 98 79 chr13 34896051 34896180 -85388132 + Lx8 LINE L1 6285 6397 -1076 6 851 263 123 3 3 chr13 34896192 34896241 -85388071 - ORR1A4 LTR MaLR -8 338 280 6 851 942 252 49 8 chr13 34896241 34896485 -85387827 - B4A SINE B4 -32 260 7 6 851 446 246 48 16 chr13 34896675 34896799 -85387513 - B1_Mur1 SINE Alu 0 149 22 6 851 237 269 147 9 chr13 34897045 34897154 -85387158 + L1MC5 LINE L1 7711 7834 -127 6 851 236 54 54 0 chr13 34897429 34897466 -85386846 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 851 30 0 0 0 chr13 34897694 34897724 -85386588 + AT_rich Low_complexity Low_complexity 1 30 0 6 851 519 315 71 17 chr13 34897866 34898163 -85386149 - MER44A DNA MER2_type -12 327 15 6 851 217 0 61 0 chr13 34899111 34899144 -85385168 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6 851 610 291 50 70 chr13 34899837 34900096 -85384216 + MER2 DNA MER2_type 90 343 -2 6 851 401 268 79 0 chr13 34900265 34900392 -85383920 + MLT1A0 LTR MaLR 1 137 -228 6 851 1510 248 139 78 chr13 34900393 34900645 -85383667 + RMER19A LTR ERVK 3 249 -488 6 851 3277 31 3 0 chr13 34900645 34901028 -85383284 - L1Md_T LINE L1 0 6582 6199 6 851 1510 248 139 78 chr13 34901028 34901467 -85382845 + RMER19A LTR ERVK 250 736 -1 6 851 2222 139 16 5 chr13 34901507 34901882 -85382430 + ORR1B1 LTR MaLR 16 394 0 6 851 224 283 19 0 chr13 34901882 34901935 -85382377 - ID4_ SINE ID -26 57 4 6 851 377 301 20 14 chr13 34901952 34902100 -85382212 + MLT1A0 LTR MaLR 217 365 0 6 851 198 0 0 0 chr13 34902416 34902438 -85381874 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 6 851 490 217 19 9 chr13 34902438 34902545 -85381767 - PB1D9 SINE Alu -12 108 1 6 851 272 284 0 0 chr13 34902494 34902561 -85381751 - B4 SINE B4 -156 136 70 6 851 979 213 163 47 chr13 34903033 34903334 -85380978 + ORR1D2 LTR MaLR 35 370 0 6 851 432 293 156 14 chr13 34904048 34904336 -85379976 - RMER5 LTR ERV1 -5 529 201 6 851 2937 167 153 36 chr13 34904344 34905147 -85379165 + RLTR13D3 LTR ERVK 1 1114 0 6 851 325 272 59 47 chr13 34905151 34905284 -85379028 - RMER5 LTR ERV1 -346 188 54 6 851 2494 89 69 16 chr13 34905284 34905708 -85378604 - RMER16 LTR ERVK 0 533 1 6 851 564 106 0 0 chr13 34905730 34905815 -85378497 + (TC)n Simple_repeat Simple_repeat 2 86 0 6 851 315 0 0 0 chr13 34905817 34905852 -85378460 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 851 189 0 0 0 chr13 34907457 34907478 -85376834 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 851 330 87 0 0 chr13 34907478 34907523 -85376789 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 851 266 296 11 0 chr13 34907807 34907895 -85376417 + RMER15 LTR ERVL 429 517 -58 6 851 477 262 0 0 chr13 34909396 34909499 -85374813 - B1F SINE Alu -7 142 40 6 851 701 19 40 81 chr13 34911015 34911189 -85373123 + (CAAA)n Simple_repeat Simple_repeat 2 168 0 6 851 775 295 92 25 chr13 34911194 34911521 -85372791 - HERVL74-int LTR ERVL -3043 2642 2294 6 851 393 252 56 9 chr13 34911596 34911704 -85372608 - ID_B1 SINE B4 -26 198 86 6 851 1711 231 19 19 chr13 34911738 34912109 -85372203 + MTD LTR MaLR 7 377 -42 6 851 2071 266 82 38 chr13 34912157 34912957 -85371355 - HERVL74-int LTR ERVL -3442 2243 1408 6 851 323 298 64 0 chr13 34913008 34913102 -85371210 - HERVL74-int LTR ERVL -4356 1329 1230 6 851 280 261 0 54 chr13 34913629 34913722 -85370590 + CT-rich Low_complexity Low_complexity 6 93 0 6 851 603 294 23 68 chr13 34914477 34914743 -85369569 - Lx9 LINE L1 -390 7254 7001 6 851 545 97 0 0 chr13 34914743 34914815 -85369497 + MERVL_2A-int LTR ERVL 3158 3229 -2532 6 851 6025 151 83 4 chr13 34914815 34916026 -85368286 - ORR1A3-int LTR MaLR -657 1306 1 6 851 1113 83 6 0 chr13 34916026 34916182 -85368130 - ORR1A3 LTR MaLR 0 326 170 6 851 278 186 70 14 chr13 34916265 34916336 -85367976 + Lx9 LINE L1 6750 6824 -820 6 851 979 315 15 0 chr13 34916701 34916971 -85367341 - B4A SINE B4 -17 275 2 6 851 277 242 150 17 chr13 34917026 34917225 -85367087 - L1MC1 LINE L1 -1630 6155 5916 6 851 844 209 79 19 chr13 34917227 34917442 -85366870 + MTD LTR MaLR 192 419 0 6 851 2746 133 43 125 chr13 34917444 34918020 -85366292 + RLTR24 LTR ERV1 1 529 0 6 851 1606 123 52 16 chr13 34918080 34918385 -85365927 - ORR1A4 LTR MaLR -13 316 1 6 851 273 253 43 21 chr13 34918642 34918735 -85365577 - RSINE1 SINE B4 -68 97 3 6 851 414 71 46 23 chr13 34918899 34918986 -85365326 + (CAGAGA)n Simple_repeat Simple_repeat 2 90 0 6 851 212 358 0 0 chr13 34919297 34919378 -85364934 - AluG_3 SINE Alu -94 217 137 6 851 462 277 41 40 chr13 34919673 34919915 -85364397 + B4A SINE B4 1 285 -7 6 851 469 81 120 54 chr13 34920879 34920971 -85363341 - RMER10B LTR ERVL 0 398 301 6 851 1501 194 22 28 chr13 34921070 34921273 -85363039 + RMER10B LTR ERVL 1 204 -194 6 851 682 75 19 0 chr13 34921273 34921379 -85362933 + (TCC)n Simple_repeat Simple_repeat 2 109 0 6 851 1501 194 22 28 chr13 34921379 34921499 -85362813 + RMER10B LTR ERVL 205 321 -77 6 851 222 62 0 0 chr13 34921886 34921918 -85362394 + (A)n Simple_repeat Simple_repeat 1 32 0 6 851 13218 153 61 8 chr13 34921957 34924285 -85360027 - RLTR42-int LTR ERVK -319 5203 2753 6 851 3499 143 66 139 chr13 34924284 34924684 -85359628 - RLTR42-int LTR ERVK -3599 1923 1540 6 851 1134 82 0 0 chr13 34924684 34924831 -85359481 - B1_Mus1 SINE Alu 0 148 2 6 851 3499 143 66 139 chr13 34924831 34925334 -85358978 - RLTR42-int LTR ERVK -3983 1539 1086 6 851 423 0 0 0 chr13 34925334 34925381 -85358931 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 851 441 274 34 8 chr13 34925384 34925502 -85358810 - B3A SINE B2 -70 128 8 6 851 1717 262 126 70 chr13 34925758 34926417 -85357895 - L1MCb LINE L1 -874 5687 4964 6 851 1174 62 0 7 chr13 34926417 34926564 -85357748 - B1_Mus2 SINE Alu 0 147 2 6 851 1717 262 126 70 chr13 34926564 34926639 -85357673 - L1MCb LINE L1 -1598 4963 4910 6 851 1355 92 5 5 chr13 34926639 34926824 -85357488 - B2_Mm2 SINE B2 -9 186 2 6 851 1717 262 126 70 chr13 34926824 34926860 -85357452 - L1MCb LINE L1 -1652 4909 4867 6 851 5897 55 3 3 chr13 34926860 34927592 -85356720 - L1Md_F2 LINE L1 -1 6581 5850 6 851 1717 262 126 70 chr13 34927592 34927795 -85356517 - L1MCb LINE L1 -1695 4866 4658 6 851 840 269 4 9 chr13 34927795 34928020 -85356292 - L1M3 LINE L1 -2345 3795 3572 6 851 1377 294 151 55 chr13 34928048 34928295 -85356017 - L1MCb LINE L1 -1921 4637 4376 6 851 1002 231 14 0 chr13 34928295 34928507 -85355805 - B3 SINE B2 0 216 2 6 851 1377 294 151 55 chr13 34928507 34929058 -85355254 - L1MCb LINE L1 -2183 4375 3762 6 851 406 297 78 15 chr13 34929076 34929281 -85355031 - L1MCb LINE L1 -2858 3703 3486 6 851 228 308 129 41 chr13 34929365 34929574 -85354738 - L1MCb LINE L1 -3058 3500 3273 6 851 387 0 0 0 chr13 34929574 34929617 -85354695 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 851 228 308 129 41 chr13 34929617 34929678 -85354634 - L1MCb LINE L1 -3286 3272 3207 6 851 312 287 20 10 chr13 34929839 34929875 -85354437 - ORR1E LTR MaLR -225 134 99 6 851 420 20 0 0 chr13 34929875 34929924 -85354388 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 851 312 287 20 10 chr13 34929924 34929989 -85354323 - ORR1E LTR MaLR -261 98 32 6 851 211 26 50 50 chr13 34929992 34930032 -85354280 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 6 851 260 311 82 11 chr13 34930075 34930257 -85354055 - L1MCb LINE L1 -4137 2429 2235 6 851 30 69 0 0 chr13 34930302 34930360 -85353952 + AT_rich Low_complexity Low_complexity 1 58 0 6 851 258 254 16 0 chr13 34930711 34930774 -85353538 + RSINE1 SINE B4 2 65 -100 6 851 320 58 0 71 chr13 34930806 34930862 -85353450 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 851 314 246 103 21 chr13 34931061 34931206 -85353106 - Charlie1 DNA MER1_type -1754 1027 871 6 851 834 190 0 26 chr13 34931333 34931347 -85352965 - B1_Mur4 SINE Alu -2 148 138 6 851 270 0 0 0 chr13 34931347 34931377 -85352935 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 6 851 834 190 0 26 chr13 34931377 34931513 -85352799 - B1_Mur4 SINE Alu -13 137 2 6 851 272 311 73 48 chr13 34931590 34932068 -85352244 - L1MCb LINE L1 -4954 1797 1310 6 851 776 232 87 69 chr13 34932068 34932447 -85351865 - MER57D LTR ERV1 0 411 9 6 851 1002 291 79 35 chr13 34933404 34934001 -85350311 - L1MCb LINE L1 -4865 1180 581 6 851 939 266 73 112 chr13 34936022 34936176 -85348136 + MER34A LTR ERV1 3 159 -412 6 851 490 337 77 18 chr13 34936176 34936448 -85347864 + B4A SINE B4 3 290 -2 6 851 939 266 73 112 chr13 34936448 34936464 -85347848 + MER34A LTR ERV1 160 170 -401 6 851 230 95 24 0 chr13 34936464 34936506 -85347806 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 851 939 266 73 112 chr13 34936506 34936533 -85347779 + MER34A LTR ERV1 171 179 -392 6 851 300 53 0 0 chr13 34936533 34936571 -85347741 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 6 851 939 266 73 112 chr13 34936571 34936963 -85347349 + MER34A LTR ERV1 180 571 0 6 851 789 252 72 44 chr13 34938066 34938315 -85345997 - MTE2b LTR MaLR -106 273 18 6 851 531 82 0 0 chr13 34938319 34938392 -85345920 + (CA)n Simple_repeat Simple_repeat 2 74 0 6 851 2573 163 38 24 chr13 34938526 34939022 -85345290 + RMER20A LTR ERVK 1 503 -13 6 851 591 304 70 43 chr13 34939109 34939436 -85344876 + MER82 DNA MER2_type 200 535 -118 6 851 317 276 255 5 chr13 34939437 34939641 -85344671 - LTR69 LTR ERVL -22 566 312 7 851 881 246 96 51 chr13 34939737 34940093 -85344219 + RMER13A LTR ERVK 95 466 -394 7 851 423 258 280 0 chr13 34940400 34940550 -85343762 - LTR69 LTR ERVL -318 270 79 7 851 723 265 18 6 chr13 34940627 34940790 -85343522 + B3 SINE B2 36 200 -16 7 851 458 216 8 0 chr13 34940794 34940919 -85343393 + GA-rich Low_complexity Low_complexity 2 127 0 7 851 294 200 0 84 chr13 34941022 34941093 -85343219 - ID_B1 SINE B4 -54 170 106 7 851 258 86 0 0 chr13 34941256 34941291 -85343021 + B1_Mus2 SINE Alu 101 135 -12 7 851 284 297 62 18 chr13 34942934 34943047 -85341265 - MLT2B3 LTR ERVL -429 125 8 7 851 372 303 112 24 chr13 34943094 34943263 -85341049 + MLT1A0 LTR MaLR 166 349 -16 7 851 244 264 92 0 chr13 34943704 34943791 -85340521 - L1MA6 LINE L1 -17 6283 6189 7 851 1976 139 138 28 chr13 34943795 34943988 -85340324 + RMER10B LTR ERVL 5 201 -197 7 851 883 75 19 12 chr13 34943988 34944149 -85340163 + (TC)n Simple_repeat Simple_repeat 2 163 0 7 851 1976 139 138 28 chr13 34944149 34944310 -85340002 + RMER10B LTR ERVL 202 398 0 7 851 468 331 0 0 chr13 34944501 34944622 -85339690 + ID_B1 SINE B4 78 198 -26 7 851 906 151 14 7 chr13 34944649 34944789 -85339523 + B1_Mur1 SINE Alu 9 149 0 7 851 414 305 30 61 chr13 34944656 34944820 -85339492 + B4A SINE B4 103 261 -31 7 851 690 255 7 7 chr13 34945288 34945434 -85338878 - B1_Mur1 SINE Alu 0 149 4 7 851 343 267 50 33 chr13 34945863 34945983 -85338329 + RLTR23 LTR ERV1 304 425 -5 7 851 388 311 39 11 chr13 34946683 34946865 -85337447 + MMERGLN-int LTR ERV1 599 785 -6816 7 851 559 338 80 46 chr13 34947150 34947760 -85336552 + MMERGLN-int LTR ERV1 1059 1782 -5819 7 851 399 289 96 74 chr13 34947870 34948247 -85336065 + MMERGLN-int LTR ERV1 1999 2383 -5173 7 851 211 60 78 20 chr13 34948265 34948316 -85335996 + (CATAT)n Simple_repeat Simple_repeat 2 55 0 7 851 1209 54 0 26 chr13 34948414 34948566 -85335746 + B1_Mus1 SINE Alu 1 148 0 7 851 1344 312 48 57 chr13 34948669 34949744 -85334568 + MMERGLN-int LTR ERV1 1931 3453 -4103 7 851 827 274 24 32 chr13 34949753 34950016 -85334296 - ORR1E LTR MaLR -121 257 9 7 851 254 214 0 0 chr13 34950633 34950689 -85333623 - Lx5 LINE L1 -7 7043 6988 7 851 251 233 9 151 chr13 34950715 34950730 -85333582 + MT2B LTR ERVL 156 245 -355 7 851 470 200 33 0 chr13 34950730 34950820 -85333492 + PB1D9 SINE Alu 2 94 -26 7 851 459 0 0 0 chr13 34950856 34950907 -85333405 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 7 851 468 129 3 1 chr13 34951663 34951739 -85332573 - B1_Mus1 SINE Alu -45 82 6 7 851 660 99 0 0 chr13 34951747 34951838 -85332474 + B1_Mus2 SINE Alu 54 144 -3 7 851 621 275 22 7 chr13 34951966 34952105 -85332207 - RSINE1 SINE B4 -22 143 3 7 851 232 304 58 0 chr13 34952360 34952429 -85331883 - L2a LINE L2 -12 3414 3342 7 851 695 221 25 85 chr13 34952497 34952839 -85331473 + RMER17C LTR ERVK 2 397 -13 7 851 391 113 28 0 chr13 34952839 34952910 -85331402 + (TC)n Simple_repeat Simple_repeat 2 74 0 7 851 216 86 0 0 chr13 34953104 34953139 -85331173 + (G)n Simple_repeat Simple_repeat 1 35 0 7 851 2419 83 227 10 chr13 34953139 34953549 -85330763 + RLTR44C LTR ERVK 2 500 -2 7 851 295 247 13 13 chr13 34953981 34954059 -85330253 - MLT2B3 LTR ERVL -472 82 5 7 851 464 246 146 31 chr13 34954072 34954202 -85330110 - B1F SINE Alu 0 149 5 7 851 319 269 140 15 chr13 34954288 34954424 -85329888 + L1M5 LINE L1 5219 5371 -775 7 851 1223 81 0 0 chr13 34954562 34954710 -85329602 - B1_Mus1 SINE Alu 0 148 1 7 851 21 57 0 0 chr13 34955002 34955037 -85329275 + AT_rich Low_complexity Low_complexity 1 35 0 7 851 728 77 0 9 chr13 34955093 34955198 -85329114 + (GAAA)n Simple_repeat Simple_repeat 2 105 0 7 851 715 205 0 25 chr13 34955777 34955897 -85328415 + PB1D9 SINE Alu 4 120 0 7 851 1009 257 14 0 chr13 34956721 34956931 -85327381 + B3 SINE B2 1 213 -3 7 851 201 167 0 0 chr13 34956965 34957001 -85327311 + (TTATA)n Simple_repeat Simple_repeat 2 37 0 7 851 223 71 48 0 chr13 34957064 34957106 -85327206 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 7 851 1188 55 13 40 chr13 34957106 34957258 -85327054 - B1_Mus1 SINE Alu 0 148 1 7 851 240 35 0 0 chr13 34957549 34957578 -85326734 + (TC)n Simple_repeat Simple_repeat 2 30 0 7 851 2072 139 118 14 chr13 34959136 34959287 -85325025 + ORR1B1 LTR MaLR 1 157 -237 7 851 180 111 0 0 chr13 34959287 34959314 -85324998 + (TATG)n Simple_repeat Simple_repeat 1 27 0 7 851 2072 139 118 14 chr13 34959314 34959519 -85324793 + ORR1B1 LTR MaLR 158 393 -1 7 851 7742 66 12 9 chr13 34959544 34960581 -85323731 - L1_Mus1 LINE L1 0 6567 5528 7 851 1170 286 85 3 chr13 34960581 34960911 -85323401 - MTE2b LTR MaLR -6 373 17 7 851 489 34 0 0 chr13 34960923 34960982 -85323330 + (CA)n Simple_repeat Simple_repeat 1 59 0 7 851 228 170 20 60 chr13 34961520 34961570 -85322742 - MLT2B1 LTR ERVL 0 567 520 7 851 265 140 35 0 chr13 34961573 34961630 -85322682 + (TA)n Simple_repeat Simple_repeat 1 59 0 7 851 940 275 130 45 chr13 34961664 34961719 -85322593 - MT2A LTR ERVL -74 459 401 7 851 4045 121 17 22 chr13 34961719 34962309 -85322003 + Lx2B LINE L1 6406 6992 -8 7 851 845 107 8 0 chr13 34962309 34962440 -85321872 + (GAAA)n Simple_repeat Simple_repeat 2 133 0 7 851 940 275 130 45 chr13 34962440 34962806 -85321506 - MT2A LTR ERVL -133 400 2 7 851 559 269 69 30 chr13 34962979 34963182 -85321130 + RMER15 LTR ERVL 325 535 -40 7 851 598 281 26 7 chr13 34963900 34964054 -85320258 - ID_B1 SINE B4 -7 217 61 7 851 29 0 0 0 chr13 34964347 34964376 -85319936 + AT_rich Low_complexity Low_complexity 1 29 0 7 851 1210 82 0 13 chr13 34964376 34964525 -85319787 - B1_Mus1 SINE Alu 0 148 2 7 851 2110 72 59 10 chr13 34964527 34964834 -85319478 - ORR1A2 LTR MaLR -5 322 1 7 851 1208 48 7 14 chr13 34965124 34965271 -85319041 - B1_Mus1 SINE Alu -1 147 2 7 851 225 0 0 0 chr13 34966459 34966484 -85317828 + (A)n Simple_repeat Simple_repeat 1 25 0 7 851 190 0 32 32 chr13 34966693 34966724 -85317588 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 7 851 1264 28 14 0 chr13 34966724 34966868 -85317444 - B1_Mus1 SINE Alu -1 147 2 7 851 487 311 113 5 chr13 34969303 34969516 -85314796 - MIR SINE MIR -26 236 1 7 851 259 266 0 86 chr13 34969602 34969672 -85314640 - ID4 SINE ID -17 66 3 7 851 440 219 74 28 chr13 34970154 34970262 -85314050 + PB1D9 SINE Alu 1 113 -7 7 851 3213 62 18 3 chr13 34970273 34970663 -85313649 - MTA_Mm LTR MaLR 0 396 1 7 851 3684 103 38 109 chr13 34970664 34971381 -85312931 - MTA_Mm-int LTR MaLR -1 1097 432 7 851 401 67 0 62 chr13 34971360 34971424 -85312888 + MTB LTR MaLR 341 400 0 7 851 235 243 157 0 chr13 34971464 34971534 -85312778 + B1_Mus1 SINE Alu 17 97 -51 7 851 306 333 29 0 chr13 34971550 34971652 -85312660 + PB1D10 SINE Alu 1 105 -12 7 851 203 286 87 26 chr13 34972601 34972716 -85311596 - MIR SINE MIR -53 209 88 7 851 186 255 0 19 chr13 34972936 34972988 -85311324 - MIR SINE MIR -100 162 112 7 851 1161 90 0 0 chr13 34974012 34974157 -85310155 - B1_Mm SINE Alu -1 146 2 7 851 1297 140 72 83 chr13 34974159 34974461 -85309851 - ORR1B1 LTR MaLR -41 353 1 7 851 823 57 32 0 chr13 34976328 34976452 -85307860 + (TCTA)n Simple_repeat Simple_repeat 4 131 0 7 851 1153 82 0 0 chr13 34976468 34976615 -85307697 - B1_Mus1 SINE Alu 0 148 2 7 851 366 279 67 9 chr13 34976921 34977026 -85307286 - PB1D9 SINE Alu -8 112 2 7 851 235 247 56 90 chr13 34976953 34977042 -85307270 - MT2B LTR ERVL -366 235 150 7 851 1196 62 0 7 chr13 34978039 34978185 -85306127 - B1_Mm SINE Alu 0 147 3 7 851 936 123 307 6 chr13 34978901 34979064 -85305248 - B3 SINE B2 -3 213 2 7 851 517 254 200 21 chr13 34979141 34979286 -85305026 + B3A SINE B2 2 172 -26 7 851 229 189 35 85 chr13 34979335 34979406 -85304906 - B1F1 SINE Alu -42 75 3 7 851 2276 188 5 29 chr13 34979438 34979855 -85304457 - MTB_Mm LTR MaLR 0 407 1 7 851 325 321 154 21 chr13 34981823 34981966 -85302346 - RSINE1 SINE B4 -1 164 3 7 851 782 270 57 83 chr13 34982712 34982942 -85301370 - B4 SINE B4 0 292 69 7 851 591 165 207 0 chr13 34983554 34983675 -85300637 - B1_Mus2 SINE Alu -1 146 1 7 851 239 348 82 46 chr13 34984760 34984956 -85299356 - ORR1E LTR MaLR -5 354 152 7 851 246 232 49 82 chr13 34988402 34988463 -85295849 - PB1D7 SINE Alu -41 79 21 7 851 211 104 20 20 chr13 34988465 34988514 -85295798 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 7 851 442 244 176 96 chr13 34988855 34988906 -85295406 - B3 SINE B2 0 216 151 7 851 468 0 0 0 chr13 34988906 34988958 -85295354 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 851 442 244 176 96 chr13 34988958 34989105 -85295207 - B3 SINE B2 -66 150 2 7 851 1265 62 0 0 chr13 34989321 34989466 -85294846 - B1_Mus2 SINE Alu 0 147 3 7 851 719 176 29 37 chr13 34989910 34990046 -85294266 + B1_Mur1 SINE Alu 2 136 -13 7 851 229 68 22 22 chr13 34991491 34991536 -85292776 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 7 852 313 256 22 22 chr13 34996248 34996340 -85287972 + PB1D10 SINE Alu 1 92 -25 7 852 893 240 82 0 chr13 34999360 34999556 -85284756 - ID_B1 SINE B4 -5 219 8 7 852 276 174 174 0 chr13 35001200 35001269 -85283043 - RSINE1 SINE B4 -38 127 47 1 852 395 224 199 48 chr13 35001482 35001688 -85282624 + RMER21B LTR ERV1 331 567 -275 2 852 733 264 33 47 chr13 35003405 35003620 -85280692 + B3 SINE B2 1 212 -4 3 852 21 0 0 0 chr13 35003765 35003786 -85280526 + AT_rich Low_complexity Low_complexity 1 21 0 4 852 225 296 98 28 chr13 35004421 35004619 -85279693 + MIR SINE MIR 23 230 -32 5 852 1578 27 5 16 chr13 35004886 35005073 -85279239 + B2_Mm1t SINE B2 1 185 -8 6 852 292 261 140 11 chr13 35005087 35005180 -85279132 + PB1D9 SINE Alu 6 110 -10 7 852 378 231 0 0 chr13 35005190 35005281 -85279031 + (TG)n Simple_repeat Simple_repeat 2 92 0 8 852 257 338 12 0 chr13 35005902 35005982 -85278330 - ID2 SINE ID 0 83 3 9 852 342 274 32 57 chr13 35005997 35006121 -85278191 - PB1 SINE Alu -2 125 5 1 852 231 36 0 0 chr13 35006936 35006964 -85277348 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 852 351 235 75 42 chr13 35006998 35007118 -85277194 + B2_Mm2 SINE B2 2 125 -70 1 852 222 37 0 0 chr13 35007145 35007172 -85277140 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 1 852 209 109 22 0 chr13 35007925 35007971 -85276341 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1 852 345 109 0 0 chr13 35008650 35008705 -85275607 + (TCG)n Simple_repeat Simple_repeat 2 56 0 1 852 26 0 0 0 chr13 35008822 35008848 -85275464 + GC_rich Low_complexity Low_complexity 1 26 0 1 852 252 0 0 0 chr13 35009359 35009387 -85274925 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 852 657 206 35 0 chr13 35009515 35009656 -85274656 - B1_Mm SINE Alu 0 147 2 1 852 688 246 69 35 chr13 35009896 35010069 -85274243 - B3A SINE B2 -15 180 2 1 852 803 190 194 6 chr13 35010462 35010642 -85273670 + B3 SINE B2 1 214 -2 2 852 733 217 35 0 chr13 35010942 35011085 -85273227 + B1_Mur2 SINE Alu 2 149 0 2 852 431 204 19 0 chr13 35011752 35011855 -85272457 + GA-rich Low_complexity Low_complexity 1 105 0 2 852 279 0 0 0 chr13 35012076 35012107 -85272205 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 852 883 233 19 92 chr13 35012216 35012248 -85272064 - L1M2 LINE L1 -493 5807 5780 2 852 486 226 16 50 chr13 35012248 35012369 -85271943 - PB1D9 SINE Alu 0 120 4 2 852 883 233 19 92 chr13 35012369 35012695 -85271617 - L1M2 LINE L1 -521 5779 5475 2 852 754 195 12 193 chr13 35012706 35012960 -85271352 - B3 SINE B2 -8 208 1 2 852 492 255 0 34 chr13 35013125 35013249 -85271063 + B1_Mur1 SINE Alu 4 121 -28 2 852 225 0 0 0 chr13 35013270 35013295 -85271017 + (CATA)n Simple_repeat Simple_repeat 4 28 0 2 852 5521 131 81 81 chr13 35014331 35015269 -85269043 + RMER12 LTR ERVK 14 950 -372 2 852 309 26 0 0 chr13 35015269 35015307 -85269005 + (CACCC)n Simple_repeat Simple_repeat 4 41 0 3 852 5521 131 81 81 chr13 35015307 35015570 -85268742 + RMER12 LTR ERVK 951 1215 -107 2 852 257 211 165 11 chr13 35017392 35017483 -85266829 - Lx8 LINE L1 -6 7467 7363 3 852 673 265 88 24 chr13 35017979 35018230 -85266082 - MLT1A0 LTR MaLR -43 322 56 3 852 827 229 51 42 chr13 35018278 35018492 -85265820 - B3 SINE B2 0 216 1 3 852 309 51 0 0 chr13 35018707 35018746 -85265566 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 852 222 196 36 0 chr13 35018750 35018806 -85265506 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 852 215 81 54 0 chr13 35019336 35019373 -85264939 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 852 351 306 78 34 chr13 35019699 35019878 -85264434 - ORR1E LTR MaLR -167 192 6 3 852 468 0 0 0 chr13 35019955 35020007 -85264305 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 852 620 233 80 17 chr13 35020277 35020291 -85264021 - B2_Mm1t SINE B2 -3 190 177 3 852 189 0 0 0 chr13 35020291 35020312 -85264000 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4 852 746 169 17 10 chr13 35020312 35020472 -85263840 - B2_Mm2 SINE B2 -17 176 5 3 852 312 272 81 70 chr13 35020508 35020694 -85263618 - ORR1E LTR MaLR -169 190 3 4 852 304 344 93 0 chr13 35021204 35021355 -85262957 + B4A SINE B4 21 185 -107 4 852 451 112 22 0 chr13 35022069 35022158 -85262154 + (TC)n Simple_repeat Simple_repeat 2 92 0 4 852 1217 314 39 21 chr13 35023238 35023670 -85260642 - MER70B LTR ERVL -138 440 1 4 852 195 42 0 0 chr13 35023945 35023969 -85260343 + (TAA)n Simple_repeat Simple_repeat 2 25 0 4 852 879 219 0 0 chr13 35025390 35025541 -85258771 + Lx9 LINE L1 7170 7320 -324 4 852 22 35 0 0 chr13 35025786 35025815 -85258497 + AT_rich Low_complexity Low_complexity 1 29 0 4 852 779 226 92 21 chr13 35025894 35026134 -85258178 - Lx9 LINE L1 -5 7639 7383 4 852 256 301 19 28 chr13 35026158 35026264 -85258048 - MLT1A1 LTR MaLR 0 408 304 4 852 944 246 107 8 chr13 35026433 35026695 -85257617 - B4A SINE B4 -2 290 3 5 852 2409 191 133 33 chr13 35027380 35027870 -85256442 + RMER19A LTR ERVK 1 570 -167 5 852 2374 84 3 58 chr13 35027870 35028212 -85256100 + ORR1A2 LTR MaLR 1 323 -4 5 852 2409 191 133 33 chr13 35028212 35028391 -85255921 + RMER19A LTR ERVK 571 737 0 5 852 594 316 61 52 chr13 35028581 35028911 -85255401 + MLT2C1 LTR ERVL 1 333 -64 5 852 624 282 119 0 chr13 35029097 35029324 -85254988 + L1MA4A LINE L1 5652 5905 -398 5 852 1317 221 96 52 chr13 35029337 35029723 -85254589 - MTD LTR MaLR -15 404 2 5 852 733 231 0 0 chr13 35029845 35029979 -85254333 + B1_Mur2 SINE Alu 2 135 -14 5 852 266 0 29 0 chr13 35029979 35030013 -85254299 + (TAAAA)n Simple_repeat Simple_repeat 5 39 0 5 852 733 231 0 0 chr13 35030013 35030025 -85254287 + B1_Mur2 SINE Alu 136 147 -2 5 852 4846 41 0 0 chr13 35030071 35030638 -85253674 + L1Md_T LINE L1 6016 6582 0 5 852 1574 177 19 28 chr13 35030675 35030711 -85253601 - ORR1B1 LTR MaLR 0 394 364 5 852 3024 75 20 17 chr13 35030711 35031117 -85253195 - MTB_Mm LTR MaLR 0 407 1 6 852 1574 177 19 28 chr13 35031117 35031399 -85252913 - ORR1B1 LTR MaLR -31 363 79 5 852 633 209 187 28 chr13 35031733 35031915 -85252397 + B3 SINE B2 1 211 -5 6 852 304 256 103 0 chr13 35033601 35033679 -85250633 + B3 SINE B2 39 124 -92 6 852 395 215 0 93 chr13 35034068 35034186 -85250126 - L1M3 LINE L1 -449 5719 5613 6 852 490 276 129 39 chr13 35034189 35034498 -85249814 - L1MD LINE L1 -1933 4213 3877 6 852 706 304 98 10 chr13 35034516 35034905 -85249407 - L1MB3 LINE L1 -3 6180 5758 6 852 227 259 162 77 chr13 35034928 35035045 -85249267 - B4A SINE B4 -164 128 2 6 852 513 237 70 0 chr13 35035085 35035199 -85249113 - B3 SINE B2 -93 123 2 6 852 1420 83 0 20 chr13 35035468 35035504 -85248808 - B2_Mm1t SINE B2 0 193 161 6 852 423 0 0 0 chr13 35035504 35035551 -85248761 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 6 852 1420 83 0 20 chr13 35035551 35035710 -85248602 - B2_Mm1t SINE B2 -33 160 2 6 852 341 125 80 0 chr13 35035819 35035907 -85248405 + Lx9 LINE L1 7543 7637 -7 7 852 446 201 54 67 chr13 35036295 35036519 -85247793 - Lx9 LINE L1 -6 7638 7418 7 852 1991 213 56 12 chr13 35036526 35036953 -85247359 - Lx9 LINE L1 -127 7517 7072 7 852 1210 207 172 51 chr13 35036950 35037165 -85247147 - Lx9 LINE L1 -1701 5943 5668 7 852 1522 212 89 31 chr13 35037165 35037515 -85246797 + ORR1D1 LTR MaLR 5 374 0 7 852 1210 185 173 46 chr13 35037515 35037676 -85246636 - Lx9 LINE L1 -180 5667 5501 7 852 1747 232 86 58 chr13 35037682 35037954 -85246358 - Lx9 LINE L1 -756 5091 4818 7 852 1683 26 0 0 chr13 35037954 35038146 -85246166 - B2_Mm1a SINE B2 0 193 2 7 852 1747 246 85 71 chr13 35038146 35038633 -85245679 - Lx9 LINE L1 -1260 4883 4407 7 852 573 295 0 0 chr13 35039031 35039170 -85245142 - B1_Mur1 SINE Alu -8 141 3 7 852 633 197 174 0 chr13 35039195 35039373 -85244939 - B3 SINE B2 -6 210 2 7 852 850 237 27 0 chr13 35040888 35041074 -85243238 - B3 SINE B2 0 216 26 7 852 218 95 0 23 chr13 35041246 35041289 -85243023 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 7 852 277 338 68 58 chr13 35041631 35042046 -85242266 - L1M5 LINE L1 -448 5714 5296 7 852 374 318 0 36 chr13 35042147 35042258 -85242054 - PB1D7 SINE Alu -8 112 6 8 852 212 309 21 106 chr13 35042177 35042271 -85242041 - B4A SINE B4 -125 167 82 8 852 417 97 0 0 chr13 35042442 35042514 -85241798 + (TC)n Simple_repeat Simple_repeat 1 72 0 8 852 524 275 50 38 chr13 35042517 35042676 -85241636 - RSINE1 SINE B4 0 165 5 8 852 519 216 0 38 chr13 35042983 35043089 -85241223 - PB1D7 SINE Alu -5 115 14 8 852 24 0 0 0 chr13 35043102 35043126 -85241186 + AT_rich Low_complexity Low_complexity 1 24 0 8 852 315 0 0 0 chr13 35043242 35043277 -85241035 + (TA)n Simple_repeat Simple_repeat 2 36 0 8 852 227 303 87 47 chr13 35043524 35043673 -85240639 + MIRb SINE MIR 94 248 -20 8 852 250 280 0 0 chr13 35044264 35044339 -85239973 - L1MA9 LINE L1 -176 6136 6062 8 852 632 84 0 21 chr13 35044412 35044509 -85239803 + (TCCC)n Simple_repeat Simple_repeat 3 97 0 8 852 222 302 0 0 chr13 35044515 35044568 -85239744 - ID2 SINE ID -11 72 20 9 852 301 173 19 0 chr13 35044712 35044764 -85239548 - MTC LTR MaLR -368 53 1 9 852 334 335 91 5 chr13 35045624 35045810 -85238502 + B4A SINE B4 91 292 0 9 852 210 282 0 25 chr13 35045812 35045892 -85238420 + (CATATA)n Simple_repeat Simple_repeat 1 78 0 9 852 4650 89 8 3 chr13 35046621 35047253 -85237059 - L1_Mus3 LINE L1 0 6638 6004 9 852 648 277 65 5 chr13 35047275 35047460 -85236852 - ID_B1 SINE B4 -3 221 26 9 852 290 317 0 38 chr13 35047539 35047644 -85236668 - Tigger7 DNA MER2_type 0 2491 2391 9 852 532 327 80 43 chr13 35047656 35047982 -85236330 + MER2 DNA MER2_type 8 345 0 9 852 2180 117 3 58 chr13 35049024 35049370 -85234942 + ORR1A2 LTR MaLR 1 327 0 9 852 2468 174 67 59 chr13 35050225 35051127 -85233185 + RLTR13D1 LTR ERVK 1 855 0 9 852 311 298 0 12 chr13 35051296 35051381 -85232931 + CT-rich Low_complexity Low_complexity 3 86 0 1 852 352 211 43 22 chr13 35052066 35052158 -85232154 + B1F SINE Alu 5 98 -51 1 852 28 29 0 0 chr13 35052753 35052788 -85231524 + AT_rich Low_complexity Low_complexity 1 35 0 1 852 480 241 29 21 chr13 35052789 35052929 -85231383 - B1_Mur3 SINE Alu -8 141 1 1 852 293 288 155 30 chr13 35053142 35053310 -85231002 - MER77 LTR ERVL -6 601 413 1 852 272 27 0 26 chr13 35054146 35054184 -85230128 + (TATG)n Simple_repeat Simple_repeat 2 38 0 1 852 240 102 0 58 chr13 35054238 35054290 -85230022 + L1Md_F2 LINE L1 6529 6577 -5 1 852 243 0 0 0 chr13 35054313 35054340 -85229972 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 852 2119 65 40 0 chr13 35054361 35054639 -85229673 + L1Md_F2 LINE L1 6294 6582 0 1 852 323 225 42 14 chr13 35054651 35054723 -85229589 - B3 SINE B2 -141 75 2 1 852 404 228 16 0 chr13 35057021 35057144 -85227168 + CT-rich Low_complexity Low_complexity 3 127 0 1 852 283 283 86 45 chr13 35057194 35057416 -85226896 - RLTR15 LTR ERVK -18 341 111 1 852 625 174 6 100 chr13 35057434 35057594 -85226718 - RMER19C LTR ERVK 0 611 467 1 852 670 169 73 7 chr13 35057897 35058034 -85226278 - RMER19B LTR ERVK -238 664 519 1 852 234 0 0 0 chr13 35058071 35058097 -85226215 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 852 457 289 36 15 chr13 35058355 35058492 -85225820 + B1F SINE Alu 1 140 -9 1 852 586 278 23 0 chr13 35058812 35058985 -85225327 - MER2 DNA MER2_type -22 323 147 1 852 195 69 0 0 chr13 35059034 35059063 -85225249 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1 852 698 227 0 8 chr13 35059092 35059225 -85225087 - B1_Mur3 SINE Alu -17 132 1 1 852 654 216 75 0 chr13 35059240 35059439 -85224873 - Lx9 LINE L1 -2 7642 7429 1 852 888 299 34 37 chr13 35059489 35059788 -85224524 - L1M2 LINE L1 -1441 4702 4412 1 852 1187 288 52 20 chr13 35059788 35060189 -85224123 + MTD LTR MaLR 5 418 -1 1 852 888 299 34 37 chr13 35060189 35060326 -85223986 - L1M2 LINE L1 -1732 4411 4267 1 852 378 286 44 33 chr13 35060333 35060514 -85223798 - L1_Rod LINE L1 -2468 3379 3197 1 852 312 164 29 29 chr13 35061393 35061462 -85222850 - PB1D10 SINE Alu -26 91 23 1 852 501 293 74 45 chr13 35061488 35061906 -85222406 - L1MEf LINE L1 -4902 1298 869 1 852 369 62 0 0 chr13 35062426 35062474 -85221838 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 1 852 930 111 52 0 chr13 35062474 35062609 -85221703 + B1_Mus1 SINE Alu 1 142 -6 1 852 24 0 0 0 chr13 35062618 35062642 -85221670 + AT_rich Low_complexity Low_complexity 1 24 0 1 852 181 260 0 20 chr13 35062873 35062924 -85221388 - L2a LINE L2 -2 3424 3375 1 852 943 275 41 19 chr13 35064581 35064718 -85219594 + MER2 DNA MER2_type 19 165 -180 1 852 300 53 0 0 chr13 35064718 35064756 -85219556 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 852 943 275 41 19 chr13 35064756 35064937 -85219375 + MER2 DNA MER2_type 166 344 -1 1 852 21 57 0 0 chr13 35065343 35065378 -85218934 + AT_rich Low_complexity Low_complexity 1 35 0 1 852 1679 167 252 7 chr13 35065543 35065971 -85218341 - MT2A LTR ERVL 0 533 1 1 852 195 129 0 0 chr13 35065984 35066015 -85218297 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1 852 642 173 0 0 chr13 35066015 35066177 -85218135 + (TCTCTG)n Simple_repeat Simple_repeat 6 167 0 1 852 700 303 148 12 chr13 35066298 35066642 -85217670 - L1MEf LINE L1 -5425 775 385 1 852 465 230 193 0 chr13 35066664 35066799 -85217513 - B3 SINE B2 0 216 56 1 852 3487 110 71 15 chr13 35066838 35067375 -85216937 + RMER2 LTR ERV1 1 567 0 1 852 246 32 0 0 chr13 35067383 35067414 -85216898 + (TC)n Simple_repeat Simple_repeat 1 31 0 1 852 1193 69 0 0 chr13 35067423 35067568 -85216744 - B1_Mus2 SINE Alu 0 147 3 1 852 694 219 112 6 chr13 35067833 35068012 -85216300 - B3A SINE B2 0 198 1 1 852 1542 200 59 80 chr13 35068977 35069352 -85214960 + ORR1B2 LTR MaLR 1 367 0 1 852 189 0 0 0 chr13 35071379 35071400 -85212912 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 852 182 191 21 0 chr13 35071400 35071447 -85212865 + (CATATA)n Simple_repeat Simple_repeat 4 51 0 1 852 255 262 83 0 chr13 35072306 35072390 -85211922 - B1F1 SINE Alu -56 93 3 1 852 294 324 6 29 chr13 35073071 35073246 -85211066 - L1M5 LINE L1 -725 5439 5269 1 852 923 148 0 20 chr13 35073333 35073485 -85210827 + B1_Mur4 SINE Alu 2 150 0 1 852 437 165 119 40 chr13 35073500 35073601 -85210711 - PB1D10 SINE Alu -8 109 1 1 852 337 306 15 53 chr13 35073632 35073763 -85210549 - ID_B1 SINE B4 -11 213 88 1 852 324 252 57 66 chr13 35073810 35073916 -85210396 - RSINE1 SINE B4 0 165 61 1 852 1936 222 2 55 chr13 35073916 35074350 -85209962 + MTC LTR MaLR 3 413 -8 1 852 379 209 2 2 chr13 35074739 35074813 -85209499 - PB1D7 SINE Alu -48 79 6 1 852 272 250 13 53 chr13 35074758 35074834 -85209478 - ID_B1 SINE B4 -83 141 69 1 852 21 57 0 0 chr13 35074946 35074981 -85209331 + AT_rich Low_complexity Low_complexity 1 35 0 1 852 704 190 50 21 chr13 35075027 35075167 -85209145 + B1_Mm SINE Alu 2 145 -2 1 852 930 175 0 0 chr13 35075167 35075344 -85208968 + (TA)n Simple_repeat Simple_repeat 2 178 0 1 852 396 0 0 0 chr13 35075344 35075388 -85208924 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 852 271 264 168 0 chr13 35076319 35076444 -85207868 - L1MA9 LINE L1 -202 6110 5965 1 852 443 264 8 32 chr13 35076639 35076764 -85207548 + B1_Mur1 SINE Alu 7 128 -21 1 852 1088 226 107 39 chr13 35077210 35077372 -85206940 - MTD LTR MaLR -2 377 179 1 852 705 24 0 0 chr13 35077372 35077455 -85206857 + (TTTTC)n Simple_repeat Simple_repeat 2 84 0 1 852 1074 73 7 0 chr13 35077455 35077591 -85206721 - B1_Mus2 SINE Alu -10 137 1 1 852 1088 203 23 31 chr13 35077591 35077782 -85206530 - MTD LTR MaLR -209 210 23 1 852 378 42 0 0 chr13 35077782 35077830 -85206482 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 852 340 329 125 5 chr13 35078606 35078814 -85205498 + B4A SINE B4 1 233 -59 1 852 1687 202 48 21 chr13 35078815 35079189 -85205123 + MTC LTR MaLR 1 384 -37 1 852 760 243 16 11 chr13 35080411 35080598 -85203714 - B3 SINE B2 -28 188 1 1 852 352 211 43 22 chr13 35082373 35082465 -85201847 + B1F SINE Alu 5 98 -51 1 852 344 325 132 23 chr13 35083391 35083649 -85200663 - MER77 LTR ERVL -10 597 312 1 852 756 244 13 31 chr13 35083852 35084076 -85200236 - MTD LTR MaLR -8 411 192 1 852 409 248 18 9 chr13 35084091 35084201 -85200111 - MTD LTR MaLR -299 122 12 1 852 708 60 0 20 chr13 35085203 35085296 -85199016 + B1_Mm SINE Alu 46 138 -9 1 852 207 0 0 0 chr13 35085296 35085319 -85198993 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 852 537 326 11 11 chr13 35086834 35087023 -85197289 + B3 SINE B2 2 190 -26 1 852 266 310 26 8 chr13 35088377 35088494 -85195818 - PB1D7 SINE Alu -1 119 1 1 852 405 0 0 0 chr13 35088497 35088542 -85195770 + (TTA)n Simple_repeat Simple_repeat 1 45 0 1 852 231 269 0 0 chr13 35088580 35088632 -85195680 - B1F2 SINE Alu -74 75 24 1 852 405 141 0 0 chr13 35089857 35089928 -85194384 - RMER6C LTR ERVK -14 676 606 1 852 965 95 0 0 chr13 35089935 35090082 -85194230 - B1_Mus2 SINE Alu 0 147 1 1 852 2310 161 168 15 chr13 35090082 35090321 -85193991 - RMER6C LTR ERVK -72 618 363 1 852 552 68 0 0 chr13 35090321 35090394 -85193918 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 852 2310 161 168 15 chr13 35090394 35090690 -85193622 - RMER6C LTR ERVK -328 362 1 1 852 456 228 20 0 chr13 35090690 35090788 -85193524 - ID_B1 SINE B4 -18 206 107 1 852 198 0 0 0 chr13 35090876 35090898 -85193414 + (ATTG)n Simple_repeat Simple_repeat 3 24 0 1 852 12181 75 7 28 chr13 35090898 35093352 -85190960 - L1_Mus2 LINE L1 -13 6553 4165 1 852 319 252 58 39 chr13 35093353 35093456 -85190856 - PB1D10 SINE Alu 0 117 13 1 852 216 266 31 0 chr13 35093463 35093527 -85190785 + CT-rich Low_complexity Low_complexity 2 67 0 1 852 883 247 102 32 chr13 35095043 35095386 -85188926 + ORR1D1 LTR MaLR 1 367 -7 1 852 1394 271 131 22 chr13 35095403 35096000 -85188312 - L1M2 LINE L1 -1742 4401 3740 1 852 1619 159 21 129 chr13 35096048 35096444 -85187868 - ORR1B1 LTR MaLR 0 394 1 1 852 278 244 36 12 chr13 35096445 35096528 -85187784 - L1M2 LINE L1 -2673 3467 3383 1 852 3617 40 11 2 chr13 35096528 35097004 -85187308 - RLTR1B LTR ERV1 0 512 33 1 852 1876 111 257 44 chr13 35097004 35097456 -85186856 - RLTR6_Mm LTR ERV1 -70 584 37 1 852 268 194 209 0 chr13 35097496 35097563 -85186749 - RLTR6_Mm LTR ERV1 -573 81 1 1 852 63075 32 14 0 chr13 35097563 35105141 -85179171 - RLTR6-int LTR ERV1 0 7778 3 1 852 1917 110 254 44 chr13 35105141 35105598 -85178714 - RLTR6_Mm LTR ERV1 -65 589 37 1 852 248 209 209 0 chr13 35105638 35105705 -85178607 - RLTR6_Mm LTR ERV1 -573 81 1 1 852 274 28 0 0 chr13 35105705 35105741 -85178571 - RLTR1B LTR ERV1 -476 36 1 1 852 180 97 0 0 chr13 35105849 35105880 -85178432 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 852 333 188 47 12 chr13 35105893 35105979 -85178333 - L1_Rod LINE L1 -2566 3281 3178 1 852 245 265 58 14 chr13 35106865 35106934 -85177378 - B1F SINE Alu -55 94 23 1 852 258 320 77 40 chr13 35106944 35107373 -85176939 - L1MEf LINE L1 -4888 1312 868 1 852 488 275 17 0 chr13 35109105 35109225 -85175087 + ID_B1 SINE B4 97 218 -6 1 852 388 250 90 24 chr13 35109748 35109929 -85174383 - L1MEf LINE L1 -4627 2006 1786 1 852 1510 193 86 3 chr13 35111112 35111439 -85172873 - ORR1C2 LTR MaLR -30 354 1 1 852 3407 35 5 0 chr13 35111768 35112162 -85172150 - MTA_Mm LTR MaLR 0 396 1 1 852 1173 56 0 0 chr13 35112700 35112842 -85171470 + B1_Mus2 SINE Alu 1 142 -5 1 852 192 77 0 0 chr13 35112847 35112873 -85171439 + (A)n Simple_repeat Simple_repeat 1 26 0 1 852 492 132 0 0 chr13 35112878 35112969 -85171343 + L1Md_F2 LINE L1 6491 6581 -1 2 852 2313 140 64 5 chr13 35113074 35113497 -85170815 + RLTR11A LTR ERVK 79 526 -2 2 852 4706 113 42 9 chr13 35113498 35114364 -85169948 - RMER12B LTR ERVK -310 1094 1 2 852 221 163 0 0 chr13 35114431 35114474 -85169838 + A-rich Low_complexity Low_complexity 3 45 0 2 852 511 267 60 0 chr13 35115465 35115615 -85168697 + MER2 DNA MER2_type 11 169 -176 2 852 403 194 10 10 chr13 35115660 35115759 -85168553 + (TA)n Simple_repeat Simple_repeat 1 99 0 2 852 404 51 0 17 chr13 35115777 35115837 -85168475 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 852 911 282 86 51 chr13 35115917 35116391 -85167921 - RLTR40 LTR ERVK -49 768 279 2 852 246 32 0 0 chr13 35116391 35116422 -85167890 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 852 911 282 86 51 chr13 35116422 35116537 -85167775 - RLTR40 LTR ERVK -539 278 159 2 852 8687 29 0 1 chr13 35116537 35117712 -85166600 - L1Md_F2 LINE L1 -3 6579 5406 2 852 4937 73 0 0 chr13 35117708 35118361 -85165951 + L1_Mm LINE L1 3059 3711 -2172 2 852 482 206 68 34 chr13 35118361 35118507 -85165805 - RLTR40 LTR ERVK -646 171 21 2 852 294 337 99 61 chr13 35119264 35119476 -85164836 + Lx8 LINE L1 6097 6316 -1157 2 852 188 268 54 40 chr13 35119514 35119588 -85164724 + L2b LINE L2 3282 3356 -19 2 852 353 276 50 45 chr13 35120016 35120236 -85164076 - Lx7 LINE L1 -15 7681 7461 2 852 1764 275 30 35 chr13 35120210 35120579 -85163733 - Lx7 LINE L1 -365 7331 6971 2 852 1078 135 129 5 chr13 35120579 35120780 -85163532 + URR1A DNA MER1_type 1 226 0 2 852 1764 275 30 35 chr13 35120780 35120946 -85163366 - Lx7 LINE L1 -726 6970 6799 2 852 627 281 123 48 chr13 35120921 35121359 -85162953 - Lx7 LINE L1 -6390 1338 868 2 852 630 281 82 67 chr13 35121616 35121959 -85162353 - MLT2D LTR ERVL -49 348 1 2 852 425 95 0 0 chr13 35122289 35122352 -85161960 + ORR1A4 LTR MaLR 1 63 -266 2 852 990 291 61 40 chr13 35122820 35123293 -85161019 + RMER5 LTR ERV1 45 527 -7 2 852 189 151 0 54 chr13 35124974 35125030 -85159282 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 852 292 331 93 43 chr13 35125044 35125205 -85159107 - B4A SINE B4 0 292 124 2 852 519 17 0 0 chr13 35125877 35125937 -85158375 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 852 231 226 0 19 chr13 35125937 35125991 -85158321 - B4A SINE B4 -225 67 15 2 852 203 322 0 22 chr13 35126383 35126475 -85157837 + CT-rich Low_complexity Low_complexity 4 93 0 2 852 1340 136 27 59 chr13 35126500 35126837 -85157475 + RMER17C LTR ERVK 85 410 0 2 853 615 120 41 0 chr13 35129516 35129650 -85154662 - B1_Mus2 SINE Alu 0 149 1 2 853 4642 182 40 62 chr13 35129675 35130005 -85154307 - RMER12 LTR ERVK -208 1114 789 2 853 356 73 0 35 chr13 35130005 35130062 -85154250 + (TGGA)n Simple_repeat Simple_repeat 1 55 0 2 853 4642 182 40 62 chr13 35130062 35130082 -85154230 - RMER12 LTR ERVK -534 788 779 2 853 1459 56 7 0 chr13 35130082 35130384 -85153928 + (CACAG)n Simple_repeat Simple_repeat 1 303 0 2 853 4642 182 40 62 chr13 35130384 35130439 -85153873 - RMER12 LTR ERVK -544 778 737 2 853 1311 18 26 1 chr13 35130439 35130612 -85153700 + (CACAG)n Simple_repeat Simple_repeat 1 182 -504 2 853 1311 18 26 1 chr13 35130617 35130790 -85153522 + (CACAG)n Simple_repeat Simple_repeat 183 364 -322 2 853 1311 18 26 1 chr13 35130799 35130975 -85153337 + (CACAG)n Simple_repeat Simple_repeat 365 549 -137 2 853 1311 18 26 1 chr13 35130985 35131109 -85153203 + (CACAG)n Simple_repeat Simple_repeat 550 686 0 2 853 4642 182 40 62 chr13 35131109 35131741 -85152571 - RMER12 LTR ERVK -591 731 67 2 853 423 0 0 0 chr13 35131741 35131788 -85152524 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 2 853 4642 182 40 62 chr13 35131788 35131857 -85152455 - RMER12 LTR ERVK -1256 66 2 2 853 853 229 9 6 chr13 35132643 35132962 -85151350 + CT-rich Low_complexity Low_complexity 1 319 0 2 853 627 140 9 0 chr13 35132962 35133069 -85151243 + (TTTC)n Simple_repeat Simple_repeat 2 109 0 2 853 240 250 105 53 chr13 35133081 35133157 -85151155 + ID4 SINE ID 1 80 -3 2 853 258 32 0 0 chr13 35133208 35133239 -85151073 + (CAA)n Simple_repeat Simple_repeat 2 32 0 2 853 367 281 0 0 chr13 35133291 35133373 -85150939 - ID4 SINE ID 0 83 2 2 853 646 298 47 27 chr13 35133459 35133818 -85150494 - MER74A LTR ERVL -105 453 4 2 853 662 296 79 34 chr13 35133829 35134340 -85149972 - L1ME2 LINE L1 -30 6304 5612 2 853 778 295 29 18 chr13 35134341 35134592 -85149720 - MER2 DNA MER2_type -1 344 88 2 853 3185 79 0 2 chr13 35134592 35135000 -85149312 - MTB_Mm LTR MaLR 0 407 1 2 853 778 295 29 18 chr13 35135000 35135021 -85149291 - MER2 DNA MER2_type -258 87 69 2 853 342 138 0 0 chr13 35135031 35135089 -85149223 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 853 1485 169 31 31 chr13 35135321 35135615 -85148697 - L1_Rod LINE L1 -168 5679 5386 2 853 419 320 84 82 chr13 35135623 35135990 -85148322 - RLTR9A LTR ERVK 0 368 1 2 853 387 196 80 53 chr13 35135990 35136141 -85148171 - L1_Rod LINE L1 -475 5372 5218 2 853 13591 23 0 0 chr13 35136120 35138355 -85145957 - L1Md_T LINE L1 0 6582 4347 2 853 4505 12 2 0 chr13 35138355 35138847 -85145465 + MT2_Mm LTR ERVL 1 493 0 2 853 41417 16 14 0 chr13 35138847 35144134 -85140178 + MERVL-int LTR ERVL 1 5360 -125 2 853 362 167 46 35 chr13 35144134 35144221 -85140091 + ORR1A3-int LTR MaLR 553 640 -1323 2 853 25330 49 0 3 chr13 35144226 35144259 -85140053 - L1Md_Gf LINE L1 -1506 4380 4356 2 853 4341 16 10 6 chr13 35144259 35144750 -85139562 + MT2_Mm LTR ERVL 1 493 0 2 853 25330 52 0 6 chr13 35144750 35148865 -85135447 - L1Md_Gf LINE L1 -1531 4355 162 2 853 515 192 69 0 chr13 35148870 35149000 -85135312 - L1_Rod LINE L1 -606 5241 5103 2 853 942 244 55 22 chr13 35148977 35149249 -85135063 - L1_Rod LINE L1 -6578 1030 750 2 853 694 283 44 73 chr13 35149528 35149896 -85134416 + MLT1C LTR MaLR 13 340 -50 2 853 797 319 585 36 chr13 35149942 35150059 -85134253 + Tigger7 DNA MER2_type 9 189 -2302 2 853 1691 148 163 93 chr13 35150059 35150476 -85133836 + RLTR41 LTR ERV1 1 446 0 2 853 797 295 42 18 chr13 35150476 35150750 -85133562 + Tigger7 DNA MER2_type 190 471 -2020 2 853 641 290 118 25 chr13 35151637 35151952 -85132360 - ORR1E LTR MaLR -5 354 11 2 853 603 247 29 35 chr13 35154294 35154466 -85129846 - B3 SINE B2 -34 182 12 2 853 983 252 139 39 chr13 35155451 35155860 -85128452 - MER31A LTR ERV1 -35 450 1 2 853 441 0 0 0 chr13 35155872 35155921 -85128391 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 853 403 192 0 0 chr13 35157050 35157128 -85127184 + B1_Mur1 SINE Alu 65 142 -7 2 853 357 24 0 0 chr13 35157128 35157170 -85127142 + (CAGG)n Simple_repeat Simple_repeat 1 42 0 2 853 230 307 117 56 chr13 35158622 35158784 -85125528 - MER5B DNA MER1_type -5 173 2 2 853 252 229 0 0 chr13 35158831 35158892 -85125420 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 853 1149 70 6 0 chr13 35159567 35159725 -85124587 + B2_Mm1a SINE B2 2 160 -33 2 853 468 0 0 0 chr13 35159725 35159777 -85124535 + (TAAA)n Simple_repeat Simple_repeat 3 54 0 2 853 456 356 26 3 chr13 35159850 35160053 -85124259 + LTR31 LTR ERV1 147 501 -267 2 853 252 301 78 57 chr13 35160096 35160237 -85124075 + Lx8 LINE L1 7037 7180 -293 2 853 231 323 55 42 chr13 35160286 35160451 -85123861 + RMER15 LTR ERVL 363 529 -46 2 853 2100 231 64 17 chr13 35160929 35161448 -85122864 - Lx7 LINE L1 -335 7361 6819 2 853 3745 82 6 28 chr13 35161547 35162089 -85122223 - L1_Mus3 LINE L1 -1 6637 6108 2 853 1109 194 52 29 chr13 35162098 35162399 -85121913 + ORR1D2 LTR MaLR 1 347 -12 2 853 373 347 29 11 chr13 35162527 35162702 -85121610 + MER5B DNA MER1_type 1 178 0 2 853 220 196 65 0 chr13 35162866 35162912 -85121400 + polypyrimidine Low_complexity Low_complexity 3 51 0 2 853 1536 118 95 54 chr13 35163443 35163565 -85120747 - Lx LINE L1 -3 6651 6535 2 853 216 0 0 0 chr13 35163565 35163589 -85120723 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 2 853 1536 118 95 54 chr13 35163589 35163761 -85120551 - Lx LINE L1 -120 6534 6347 2 853 378 0 0 0 chr13 35163761 35163803 -85120509 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 853 288 318 54 23 chr13 35163845 35163974 -85120338 + RSINE1 SINE B4 4 136 -29 2 853 399 89 0 0 chr13 35164005 35164061 -85120251 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 853 198 0 0 0 chr13 35164120 35164142 -85120170 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2 853 1198 49 0 0 chr13 35164145 35164287 -85120025 - B1_Mus1 SINE Alu -6 142 1 2 853 456 208 104 43 chr13 35164287 35164498 -85119814 + LTR37B LTR ERV1 228 451 -17 2 853 183 42 0 0 chr13 35164646 35164670 -85119642 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2 853 477 0 0 0 chr13 35164713 35164766 -85119546 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 853 593 210 50 21 chr13 35165662 35165803 -85118509 - Lx8 LINE L1 -704 6769 6625 2 853 1788 296 43 44 chr13 35165832 35166621 -85117691 + L1_Mur3 LINE L1 5077 5864 -16 2 853 909 178 34 11 chr13 35166868 35167044 -85117268 - B2_Mm2 SINE B2 -14 181 2 2 853 14106 87 16 14 chr13 35167812 35170595 -85113717 - L1VL2 LINE L1 -626 2989 200 2 853 778 291 57 83 chr13 35170690 35170990 -85113322 - B4 SINE B4 0 292 1 2 853 316 271 35 12 chr13 35172668 35172754 -85111558 - ORR1E LTR MaLR -271 88 1 2 853 781 288 157 22 chr13 35172760 35173313 -85110999 - L1M5 LINE L1 -2378 3768 3141 2 853 254 311 122 0 chr13 35173544 35173634 -85110678 + LTR16B1 LTR ERVL 141 241 -239 2 853 236 279 31 62 chr13 35173717 35173782 -85110530 + ID4 SINE ID 2 64 -19 2 853 207 0 0 0 chr13 35173782 35173805 -85110507 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 853 432 0 0 0 chr13 35173805 35173852 -85110460 + (GA)n Simple_repeat Simple_repeat 2 49 0 2 853 811 237 112 53 chr13 35174706 35174964 -85109348 - L1M3 LINE L1 -1736 4404 4143 2 853 2314 110 3 0 chr13 35174964 35175272 -85109040 + RLTR27 LTR ERVK 1 309 0 2 853 811 237 112 53 chr13 35175272 35175387 -85108925 - L1M3 LINE L1 -1998 4142 4009 2 853 252 0 0 0 chr13 35175871 35175899 -85108413 + (A)n Simple_repeat Simple_repeat 1 28 0 2 853 429 136 0 0 chr13 35176199 35176265 -85108047 + URR1B DNA MER1_type 160 225 0 2 853 258 191 62 16 chr13 35176208 35176272 -85108040 - CYRA11_Mm Unknown Y-chromosome -386 231 165 2 853 582 313 86 4 chr13 35176478 35176722 -85107590 - MT2A LTR ERVL 0 533 270 2 853 645 105 0 0 chr13 35176828 35176923 -85107389 + (TCCC)n Simple_repeat Simple_repeat 4 98 0 2 853 858 194 156 0 chr13 35177374 35177560 -85106752 - B3 SINE B2 -1 215 1 2 853 207 88 0 0 chr13 35177815 35177849 -85106463 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 2 853 541 302 74 4 chr13 35178470 35178713 -85105599 + MER33 DNA MER1_type 42 301 -23 2 853 306 202 82 5 chr13 35180033 35180129 -85104183 - ORR1D1 LTR MaLR 0 394 284 3 853 1361 228 33 55 chr13 35180136 35180466 -85103846 - ORR1D1 LTR MaLR -41 333 11 3 853 251 371 69 0 chr13 35180573 35180689 -85103623 - MER20 DNA MER1_type 0 219 96 3 853 2867 65 8 0 chr13 35181005 35181373 -85102939 + L1_Mus4 LINE L1 5815 6185 -451 3 853 8684 138 1 37 chr13 35181375 35182347 -85101965 - L1_Mm LINE L1 -61 5822 4863 3 853 1331 84 56 6 chr13 35182347 35182527 -85101785 + B2_Mm2 SINE B2 1 189 -6 3 853 8684 138 1 37 chr13 35182527 35182986 -85101326 - L1_Mm LINE L1 -1021 4862 4443 3 853 234 281 65 33 chr13 35182986 35183078 -85101234 - RLTR5_Mm LTR ERV1 -139 489 395 3 853 414 221 139 0 chr13 35183411 35183533 -85100779 - L1MA10 LINE L1 -11 6323 6185 3 853 2840 266 52 16 chr13 35184206 35184959 -85099353 - Lx8 LINE L1 -465 7008 6229 3 853 3468 241 100 64 chr13 35184962 35186068 -85098244 + MTD-int LTR MaLR 113 1258 0 3 853 1523 239 28 20 chr13 35186068 35186423 -85097889 + MTD LTR MaLR 1 358 -61 3 853 189 147 0 0 chr13 35186426 35186460 -85097852 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 853 3075 273 108 26 chr13 35186503 35187910 -85096402 - L1_Mur3 LINE L1 -133 5747 4226 3 853 375 23 0 0 chr13 35188614 35188658 -85095654 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 853 708 137 0 0 chr13 35188658 35188797 -85095515 + (GA)n Simple_repeat Simple_repeat 1 139 0 3 853 22 0 0 0 chr13 35189196 35189218 -85095094 + AT_rich Low_complexity Low_complexity 1 22 0 3 853 1117 189 54 10 chr13 35189459 35189662 -85094650 + B3 SINE B2 1 212 -4 3 853 332 273 55 0 chr13 35190526 35190636 -85093676 + MER2 DNA MER2_type 90 205 -140 3 853 2702 166 28 14 chr13 35190637 35191143 -85093169 + RLTR11A2 LTR ERVK 1 513 -14 3 853 1165 189 9 19 chr13 35191753 35191969 -85092343 + B3 SINE B2 3 216 0 3 853 251 333 0 0 chr13 35192273 35192339 -85091973 + polypyrimidine Low_complexity Low_complexity 2 67 0 3 853 21 0 0 0 chr13 35192419 35192440 -85091872 + AT_rich Low_complexity Low_complexity 1 21 0 3 853 390 159 0 0 chr13 35192518 35192587 -85091725 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 853 234 169 0 0 chr13 35192609 35192674 -85091638 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 3 853 342 0 0 0 chr13 35192676 35192714 -85091598 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 853 210 296 86 54 chr13 35192785 35192878 -85091434 + PB1D10 SINE Alu 2 97 -20 3 853 238 325 24 24 chr13 35192906 35192988 -85091324 + ID4_ SINE ID 2 83 0 3 853 2163 217 17 7 chr13 35193368 35193781 -85090531 + MTD LTR MaLR 1 417 -2 3 853 1217 238 90 70 chr13 35193952 35194440 -85089872 - RMER4B LTR ERVK -38 573 17 3 853 3488 165 38 25 chr13 35194456 35195108 -85089204 - MurERV4-int LTR ERVK -3 5257 4597 3 853 2578 77 40 0 chr13 35195105 35195458 -85088854 - MurERV4-int LTR ERVK -1977 3283 2917 3 853 4120 146 15 35 chr13 35195453 35195661 -85088651 - MurERV4-int LTR ERVK -654 4606 4414 3 853 5808 82 14 8 chr13 35195661 35196395 -85087917 - Lx3_Mus LINE L1 0 7009 6272 3 853 4120 146 15 35 chr13 35196395 35196908 -85087404 - MurERV4-int LTR ERVK -847 4413 3899 3 853 13458 85 48 12 chr13 35196909 35199729 -85084583 + L1VL2 LINE L1 76 2988 -627 3 853 1877 131 3 3 chr13 35199812 35200095 -85084217 - MurERV4-int LTR ERVK -1457 3803 3521 3 853 405 121 36 0 chr13 35200095 35200178 -85084134 + CT-rich Low_complexity Low_complexity 6 91 0 3 853 11498 165 34 19 chr13 35200178 35200617 -85083695 - MurERV4-int LTR ERVK -1730 3530 3070 3 853 3188 44 8 3 chr13 35200617 35200985 -85083327 - L1Md_F2 LINE L1 -12 6570 6201 3 853 11498 165 34 19 chr13 35200985 35202592 -85081720 - MurERV4-int LTR ERVK -2191 3069 1454 3 853 610 209 398 4 chr13 35202593 35202830 -85081482 - MurERV4-int LTR ERVK -4754 506 177 3 853 898 163 6 11 chr13 35202857 35203037 -85081275 + GA-rich Low_complexity Low_complexity 1 179 0 3 853 1143 196 58 65 chr13 35203239 35203718 -85080594 - RMER4B LTR ERVK 0 466 1 3 853 2060 93 24 63 chr13 35203887 35204219 -85080093 - ORR1A2 LTR MaLR -8 319 1 3 853 282 359 6 76 chr13 35204549 35204706 -85079606 - MLT1J LTR MaLR -247 265 120 3 853 325 280 68 47 chr13 35204833 35205024 -85079288 - L2 LINE L2 -905 2514 2320 3 853 200 276 116 84 chr13 35205024 35205119 -85079193 - L2 LINE L2 -1896 1523 1426 3 853 553 250 62 6 chr13 35205474 35205635 -85078677 - MER2 DNA MER2_type -40 305 136 3 853 618 216 28 35 chr13 35205627 35205771 -85078541 - B1F SINE Alu 0 149 7 3 853 362 323 33 76 chr13 35206586 35206974 -85077338 + MLT2B4 LTR ERVL 58 567 0 3 853 961 266 56 48 chr13 35207218 35207603 -85076709 - MTE2a LTR MaLR 0 419 20 3 853 4515 54 6 9 chr13 35207603 35208146 -85076166 + L1Md_F2 LINE L1 6042 6582 0 3 853 278 365 44 0 chr13 35208165 35208302 -85076010 - Charlie2b DNA MER1_type -12 2770 2628 3 853 288 287 78 42 chr13 35208778 35208920 -85075392 - RLTR20B3 LTR ERVK -326 251 105 3 853 239 323 22 30 chr13 35209400 35209534 -85074778 - Charlie2b DNA MER1_type -306 2476 2344 3 853 496 309 91 70 chr13 35209803 35210127 -85074185 + LTR73 LTR ERV1 33 383 -189 3 853 1359 98 16 11 chr13 35210127 35210313 -85073999 - B2_Mm2 SINE B2 -7 188 2 3 853 496 309 91 70 chr13 35210313 35210371 -85073941 + LTR73 LTR ERV1 384 423 -149 3 853 273 246 188 0 chr13 35211066 35211135 -85073177 - MER45C DNA Tip100 -740 213 132 3 853 335 238 0 0 chr13 35211445 35211508 -85072804 + ID4 SINE ID 5 67 -16 3 853 237 290 55 29 chr13 35211944 35212081 -85072231 + MIRb SINE MIR 118 262 0 3 853 420 323 90 31 chr13 35212102 35212328 -85071984 - MLT1D LTR MaLR -7 460 165 3 853 453 247 92 86 chr13 35212833 35213000 -85071312 - MLT1D LTR MaLR -279 188 19 3 853 1236 236 36 121 chr13 35213034 35213448 -85070864 - MTE2a LTR MaLR 0 379 1 3 853 571 355 61 19 chr13 35215304 35215617 -85068695 + LTR31 LTR ERV1 143 468 -151 3 853 387 154 0 0 chr13 35215631 35215701 -85068611 - B4 SINE B4 -208 84 15 3 853 272 313 148 39 chr13 35216384 35216587 -85067725 + MLT1J2 LTR MaLR 176 400 -48 3 853 440 274 9 9 chr13 35216900 35217014 -85067298 - PB1D10 SINE Alu 0 117 4 3 853 271 299 13 13 chr13 35217069 35217147 -85067165 + MLT1A1 LTR MaLR 50 127 -281 3 853 330 220 9 99 chr13 35217295 35217406 -85066906 + MLT1A1 LTR MaLR 305 405 -3 3 853 1256 208 80 178 chr13 35217857 35218081 -85066231 - MTD LTR MaLR -2 417 196 3 853 6143 181 29 35 chr13 35218081 35219170 -85065142 - Lx5 LINE L1 0 7050 5969 3 853 1256 208 80 178 chr13 35219170 35219202 -85065110 - MTD LTR MaLR -224 195 192 3 853 243 0 0 0 chr13 35219202 35219229 -85065083 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 853 1256 208 80 178 chr13 35219229 35219433 -85064879 - MTD LTR MaLR -228 191 1 3 853 607 295 106 114 chr13 35219560 35220043 -85064269 + MLT2B3 LTR ERVL 1 488 -66 3 853 672 13 0 0 chr13 35220043 35220120 -85064192 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 3 853 607 295 106 114 chr13 35220120 35220195 -85064117 + MLT2B3 LTR ERVL 489 553 -1 3 853 688 297 42 11 chr13 35220360 35220637 -85063675 - L1MB7 LINE L1 -20 6164 5878 3 853 442 309 62 88 chr13 35220644 35220721 -85063591 - ID_B1 SINE B4 -2 222 2 3 853 924 213 0 0 chr13 35220721 35220871 -85063441 - B3 SINE B2 -65 151 2 3 853 916 224 154 17 chr13 35221186 35221426 -85062886 - ORR1E LTR MaLR -5 354 82 3 853 240 282 212 55 chr13 35221948 35222241 -85062071 - RLTR11A2 LTR ERVK -79 448 110 3 853 736 221 28 0 chr13 35222271 35222416 -85061896 + B1_Mur3 SINE Alu 1 149 0 3 853 299 287 22 22 chr13 35222418 35222507 -85061805 + GA-rich Low_complexity Low_complexity 2 90 0 3 853 678 52 43 8 chr13 35222513 35222630 -85061682 + (GA)n Simple_repeat Simple_repeat 2 122 0 3 853 225 0 0 0 chr13 35223611 35223636 -85060676 + (CCA)n Simple_repeat Simple_repeat 3 27 0 3 853 38939 42 2 9 chr13 35224668 35230878 -85053434 - L1Md_F2 LINE L1 -13 6569 411 3 853 1606 266 129 96 chr13 35231100 35231736 -85052576 + L1_Mur3 LINE L1 3552 4242 -1901 3 853 794 181 34 28 chr13 35231736 35231912 -85052400 + B2_Mm2 SINE B2 9 185 -10 3 853 1606 266 129 96 chr13 35231912 35232586 -85051726 + L1_Mur3 LINE L1 4243 4977 -1166 3 853 697 204 73 0 chr13 35232586 35232723 -85051589 + B1_Mur3 SINE Alu 3 149 0 3 853 1546 284 57 71 chr13 35232723 35232822 -85051490 + L1_Mur3 LINE L1 4978 5066 -1077 3 853 31691 111 11 25 chr13 35232896 35239227 -85045085 + L1_Mus1 LINE L1 294 6567 0 3 853 733 298 56 23 chr13 35239311 35239737 -85044575 + Lx8 LINE L1 5049 5521 -359 3 853 1755 210 102 23 chr13 35239737 35240206 -85044106 - RMER19C LTR ERVK 0 611 138 3 853 750 239 182 14 chr13 35240241 35240521 -85043791 + Lx8 LINE L1 5505 5831 -16 3 853 2920 94 169 0 chr13 35240594 35241085 -85043227 + MT2B2 LTR ERVL 11 584 0 3 853 889 129 32 19 chr13 35241189 35241347 -85042965 - RMER19C LTR ERVK 0 611 452 3 853 450 324 106 0 chr13 35241351 35241530 -85042782 + Lx8 LINE L1 6281 6478 -995 3 853 294 195 135 22 chr13 35241587 35241676 -85042636 + MTD LTR MaLR 22 120 -299 3 853 1612 193 7 23 chr13 35241698 35242000 -85042312 - Lx5 LINE L1 0 7050 6754 3 853 186 47 22 65 chr13 35242001 35242047 -85042265 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 3 853 922 50 0 0 chr13 35242063 35242184 -85042128 - B1_Mus2 SINE Alu -1 146 26 3 853 5251 155 46 2 chr13 35242184 35243051 -85041261 - Lx5 LINE L1 -294 6756 5852 3 853 1536 195 31 3 chr13 35243122 35243621 -85040691 - L1_Mur3 LINE L1 -4415 1462 877 3 853 1266 216 38 17 chr13 35243869 35244161 -85040151 + MTD LTR MaLR 108 405 -14 3 853 1201 298 5 69 chr13 35244169 35244562 -85039750 + Lx8 LINE L1 6493 6860 -613 3 853 296 239 0 15 chr13 35245240 35245308 -85039004 - ID SINE ID -153 71 5 3 853 2222 142 32 68 chr13 35245773 35246182 -85038130 + ORR1B1 LTR MaLR 1 394 0 3 853 532 196 0 10 chr13 35247116 35247214 -85037098 - ID_B1 SINE B4 -15 209 113 3 853 187 302 45 60 chr13 35247837 35247904 -85036408 - L2b LINE L2 -319 3056 2991 3 853 292 303 184 0 chr13 35248090 35248242 -85036070 + MLT1G3 LTR MaLR 23 202 -393 3 853 280 175 11 81 chr13 35248567 35248654 -85035658 + MLT1G3 LTR MaLR 321 401 -7 3 853 451 333 143 49 chr13 35248671 35249000 -85035312 + MLT1G3 LTR MaLR 176 542 -53 3 853 5436 16 0 0 chr13 35249000 35249606 -85034706 - L1Md_A LINE L1 0 6582 5977 3 853 527 100 35 38 chr13 35249606 35249728 -85034584 + L1Md_A LINE L1 5911 6032 -534 3 853 1410 221 59 76 chr13 35249815 35250485 -85033827 + RMER19C LTR ERVK 1 604 -7 3 853 180 250 45 0 chr13 35251251 35251295 -85033017 - L2b LINE L2 -93 3282 3237 3 853 232 281 0 50 chr13 35252025 35252085 -85032227 - MLT1A1 LTR MaLR -279 129 73 3 853 367 212 133 17 chr13 35253610 35253730 -85030582 - RMER15 LTR ERVL -86 489 356 3 853 779 296 49 91 chr13 35254250 35254536 -85029776 + B4A SINE B4 1 274 -18 3 853 450 0 0 0 chr13 35254584 35254634 -85029678 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 853 279 246 28 40 chr13 35254715 35254800 -85029512 - MLT1B LTR MaLR -64 403 254 3 853 334 306 36 0 chr13 35254830 35254941 -85029371 - MLT1C LTR MaLR -130 337 223 3 853 495 298 63 46 chr13 35254997 35255343 -85028969 - MLT1A LTR MaLR -21 353 1 4 853 270 274 21 0 chr13 35255908 35256003 -85028309 + (TA)n Simple_repeat Simple_repeat 2 98 0 4 853 269 306 26 71 chr13 35256072 35256227 -85028085 + MER2B DNA MER2_type 172 319 -17 4 853 1451 219 77 34 chr13 35256333 35256683 -85027629 - ORR1D2 LTR MaLR -1 369 5 4 853 189 0 0 0 chr13 35257953 35257974 -85026338 + (T)n Simple_repeat Simple_repeat 1 21 0 4 854 303 333 61 50 chr13 35258428 35258608 -85025704 + MER5A DNA MER1_type 1 182 -7 4 854 823 280 128 13 chr13 35259687 35259991 -85024321 - MER44B DNA MER2_type -203 347 9 4 854 872 292 3 61 chr13 35260114 35260293 -85024019 + B4A SINE B4 5 176 -116 4 854 1214 165 61 0 chr13 35260293 35260505 -85023807 - URR1A DNA MER1_type -1 225 1 4 854 872 292 3 61 chr13 35260505 35260620 -85023692 + B4A SINE B4 177 282 -10 4 854 259 275 14 0 chr13 35260640 35260709 -85023603 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 854 194 33 0 62 chr13 35262347 35262379 -85021933 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 4 854 1530 183 125 11 chr13 35262387 35262740 -85021572 + MTD LTR MaLR 27 419 0 4 854 495 187 0 0 chr13 35262985 35263092 -85021220 + (TG)n Simple_repeat Simple_repeat 1 107 0 4 854 491 209 187 0 chr13 35263155 35263294 -85021018 - B4A SINE B4 -117 175 11 4 854 298 309 77 88 chr13 35263524 35263886 -85020426 - ORR1E LTR MaLR 0 359 2 4 854 658 208 19 39 chr13 35265999 35266154 -85018158 + B3 SINE B2 65 216 0 4 854 245 200 83 28 chr13 35266269 35266341 -85017971 + RLTR24 LTR ERV1 1 76 -453 4 854 7779 43 3 8 chr13 35266341 35267512 -85016800 - L1Md_F2 LINE L1 -40 6542 5379 4 854 2575 135 23 76 chr13 35267512 35268040 -85016272 + RLTR24 LTR ERV1 30 529 0 4 854 399 229 0 40 chr13 35268194 35268294 -85016018 + RSINE1 SINE B4 3 98 -67 4 854 337 337 34 29 chr13 35269364 35269569 -85014743 + L2a LINE L2 2935 3140 -286 4 854 336 234 43 0 chr13 35269680 35269774 -85014538 - MER97c DNA MER1_type? -486 604 507 4 854 827 262 9 18 chr13 35269796 35270014 -85014298 - B3 SINE B2 0 216 1 4 854 952 284 81 42 chr13 35271009 35271343 -85012969 + MTE2a LTR MaLR 3 349 -30 4 854 245 385 9 0 chr13 35271610 35271719 -85012593 + MIR SINE MIR 28 137 -125 4 854 459 279 113 77 chr13 35271796 35272122 -85012190 - MLT1A0 LTR MaLR -7 358 21 4 854 247 328 0 56 chr13 35273029 35273155 -85011157 + MER99 DNA hAT? 365 483 -348 4 854 323 300 50 0 chr13 35273574 35273674 -85010638 + PB1D10 SINE Alu 3 107 -13 4 854 3001 268 45 29 chr13 35273700 35274488 -85009824 + Lx8 LINE L1 6533 7337 -136 4 854 1070 220 5 9 chr13 35274488 35274704 -85009608 - B3 SINE B2 -1 215 1 4 854 3001 268 45 29 chr13 35274704 35274833 -85009479 + Lx8 LINE L1 7338 7464 -9 4 854 630 282 162 14 chr13 35274835 35275249 -85009063 - L1MD LINE L1 -1287 4859 4385 4 854 228 141 200 53 chr13 35275587 35275662 -85008650 - Lx8 LINE L1 -1 7472 7387 4 854 204 67 0 0 chr13 35275698 35275728 -85008584 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 854 821 259 10 5 chr13 35275733 35275927 -85008385 - B3 SINE B2 -15 201 7 4 854 717 223 19 27 chr13 35276241 35276438 -85007874 - ORR1C2 LTR MaLR -194 200 1 4 854 227 184 41 0 chr13 35276585 35276634 -85007678 - RMER15 LTR ERVL -524 51 1 4 854 1825 161 169 16 chr13 35278379 35278752 -85005560 - RLTR23 LTR ERV1 0 430 1 4 854 453 116 0 0 chr13 35278997 35279066 -85005246 + (GGGA)n Simple_repeat Simple_repeat 2 70 0 4 854 269 295 70 18 chr13 35279151 35279265 -85005047 - ORR1E LTR MaLR -239 120 1 4 854 217 240 0 0 chr13 35279463 35279513 -85004799 + (CAA)n Simple_repeat Simple_repeat 3 52 0 4 854 393 182 231 27 chr13 35279676 35279823 -85004489 + RMER20B LTR ERVK 132 308 -319 4 854 228 67 0 0 chr13 35279891 35279921 -85004391 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 854 311 250 30 50 chr13 35282093 35282194 -85002118 + PB1D10 SINE Alu 10 108 -9 4 854 373 202 37 37 chr13 35282203 35282285 -85002027 + ID4 SINE ID 2 83 0 4 854 518 229 9 0 chr13 35282603 35282712 -85001600 - PB1D10 SINE Alu -7 110 1 4 854 807 250 118 19 chr13 35285024 35285420 -84998892 + L1MA4 LINE L1 5606 6029 -271 4 854 189 0 0 0 chr13 35285443 35285464 -84998848 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 854 513 0 0 0 chr13 35285774 35285831 -84998481 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 854 1672 133 72 0 chr13 35285835 35286128 -84998184 - IAPEY3_LTR LTR ERVK -5 327 14 4 854 450 0 0 0 chr13 35286132 35286182 -84998130 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 854 2197 278 92 14 chr13 35286191 35287005 -84997307 + Lx9 LINE L1 6738 7615 -29 4 854 755 21 0 11 chr13 35287347 35287441 -84996871 + (TTCTCC)n Simple_repeat Simple_repeat 4 96 0 4 854 254 271 36 27 chr13 35287509 35287619 -84996693 - MER106B DNA MER1_type -15 1044 934 4 854 276 350 10 0 chr13 35287841 35287938 -84996374 + ID_B1 SINE B4 118 215 -9 4 854 232 322 118 32 chr13 35287968 35288172 -84996140 + L1MC LINE L1 4401 4615 -1531 4 854 501 32 0 0 chr13 35288172 35288235 -84996077 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 4 854 232 322 118 32 chr13 35288235 35288370 -84995942 + L1MC LINE L1 4616 4768 -1378 4 854 227 358 0 8 chr13 35288468 35288589 -84995723 + L1M5 LINE L1 4900 5019 -1127 4 854 573 298 88 35 chr13 35288706 35289106 -84995206 - L1MEc LINE L1 -5611 789 369 4 854 222 98 59 0 chr13 35289168 35289219 -84995093 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 854 269 348 68 0 chr13 35289224 35289385 -84994927 - L1MEc LINE L1 -6108 292 121 4 854 279 0 0 0 chr13 35289736 35289767 -84994545 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 854 288 0 0 0 chr13 35289983 35290015 -84994297 + (TGGA)n Simple_repeat Simple_repeat 2 33 0 4 854 314 351 98 12 chr13 35290296 35290469 -84993843 + L1MEd LINE L1 507 694 -5425 4 854 1052 192 34 5 chr13 35290665 35290874 -84993438 + B3 SINE B2 1 215 -1 4 854 413 240 24 152 chr13 35291040 35291078 -84993234 - B2_Mm2 SINE B2 -9 186 149 4 854 252 0 0 0 chr13 35291078 35291106 -84993206 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 854 635 236 6 77 chr13 35291106 35291278 -84993034 - B3A SINE B2 -38 160 3 4 854 641 176 15 0 chr13 35291361 35291492 -84992820 + GA-rich Low_complexity Low_complexity 3 135 0 4 854 285 51 0 0 chr13 35291548 35291587 -84992725 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 4 854 21 0 0 0 chr13 35291631 35291652 -84992660 + AT_rich Low_complexity Low_complexity 1 21 0 4 854 349 345 44 22 chr13 35291659 35291840 -84992472 + L1M5 LINE L1 5259 5443 -731 4 854 429 292 36 14 chr13 35291904 35292098 -84992214 + L1M5 LINE L1 5559 5768 -416 4 854 244 306 8 51 chr13 35292187 35292304 -84992008 + GA-rich Low_complexity Low_complexity 6 117 0 4 854 524 269 194 25 chr13 35294198 35294518 -84989794 - MLT1F LTR MaLR -26 522 149 4 854 523 208 0 122 chr13 35295012 35295160 -84989152 + B3 SINE B2 63 192 -24 4 854 495 0 0 0 chr13 35296220 35296275 -84988037 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 854 1568 210 53 25 chr13 35296606 35297001 -84987311 - MTD LTR MaLR -13 406 1 4 854 1414 231 37 40 chr13 35297263 35297638 -84986674 - MTEa LTR MaLR -3 376 3 4 854 495 0 0 0 chr13 35297696 35297751 -84986561 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 854 325 224 48 67 chr13 35299190 35299295 -84985017 + LTR16B1 LTR ERVL 5 107 -373 4 854 1095 278 23 23 chr13 35299653 35300043 -84984269 - L1MB3 LINE L1 -9 6174 5785 4 854 1184 215 57 25 chr13 35300079 35300394 -84983918 + MTEb LTR MaLR 3 327 -52 4 854 671 265 12 0 chr13 35300433 35300599 -84983713 - L1MB3 LINE L1 -405 5766 5599 4 854 396 340 39 0 chr13 35301953 35302106 -84982206 + LTR16A LTR ERVL 27 185 -266 4 854 310 195 0 24 chr13 35302132 35302216 -84982096 + GA-rich Low_complexity Low_complexity 3 84 0 4 854 872 236 71 202 chr13 35303744 35304179 -84980133 - MTE2b LTR MaLR 0 379 2 4 854 244 310 35 12 chr13 35305505 35305590 -84978722 - PB1 SINE Alu -40 87 1 4 854 769 289 99 0 chr13 35305630 35305914 -84978398 + MER2 DNA MER2_type 14 325 -20 4 854 537 16 0 0 chr13 35305931 35305993 -84978319 + (TC)n Simple_repeat Simple_repeat 2 63 0 4 854 594 200 0 0 chr13 35306487 35306715 -84977597 + (TG)n Simple_repeat Simple_repeat 1 228 0 4 854 1307 123 13 48 chr13 35307542 35307772 -84976540 + ORR1A2 LTR MaLR 1 222 -105 4 854 305 62 0 20 chr13 35307959 35308008 -84976304 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 4 854 404 307 68 0 chr13 35308389 35308552 -84975760 + MER20 DNA MER1_type 15 188 -31 4 854 273 57 0 0 chr13 35308811 35308846 -84975466 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 854 318 287 89 0 chr13 35309035 35309136 -84975176 + PB1D10 SINE Alu 1 110 -7 4 854 227 310 70 0 chr13 35309563 35309634 -84974678 + ORR1E LTR MaLR 10 85 -274 4 854 598 335 88 0 chr13 35310008 35310259 -84974053 - MLT2B1 LTR ERVL -27 493 221 4 854 350 306 0 0 chr13 35310289 35310374 -84973938 + ID_B1 SINE B4 108 192 -32 4 854 244 230 0 33 chr13 35310426 35310516 -84973796 + GA-rich Low_complexity Low_complexity 2 88 0 4 854 315 304 128 0 chr13 35310555 35310680 -84973632 + B1F2 SINE Alu 1 141 -8 4 854 365 317 62 14 chr13 35310956 35311100 -84973212 + RMER15 LTR ERVL 422 572 -3 4 854 577 243 0 0 chr13 35311139 35311279 -84973033 - MLT2B1 LTR ERVL -373 142 3 4 854 21 0 0 0 chr13 35311562 35311583 -84972729 + AT_rich Low_complexity Low_complexity 1 21 0 4 854 865 227 42 28 chr13 35311914 35312124 -84972188 + MTE2b LTR MaLR 7 219 -160 4 854 1132 41 0 0 chr13 35312124 35312270 -84972042 - MTB LTR MaLR 0 400 255 4 854 1183 264 212 15 chr13 35312318 35312775 -84971537 + RLTR1 LTR ERV1 78 624 0 4 854 1504 120 62 4 chr13 35312775 35313018 -84971294 - MTB LTR MaLR -142 258 1 4 854 508 209 17 17 chr13 35313022 35313139 -84971173 + MTE2b LTR MaLR 219 335 -44 4 854 200 288 15 46 chr13 35313438 35313569 -84970743 + GA-rich Low_complexity Low_complexity 2 128 0 5 854 1450 200 74 39 chr13 35314018 35314424 -84969888 - RCHARR1 DNA MER1_type -155 819 400 5 854 624 293 76 9 chr13 35314436 35314646 -84969666 - RCHARR1 DNA MER1_type -741 233 10 5 854 285 81 32 16 chr13 35314938 35315001 -84969311 + (CAAAAA)n Simple_repeat Simple_repeat 2 65 0 5 854 351 299 62 0 chr13 35315007 35315104 -84969208 + B3A SINE B2 42 144 -54 5 854 324 0 0 0 chr13 35315107 35315143 -84969169 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 854 276 231 141 11 chr13 35315348 35315440 -84968872 + MTEb LTR MaLR 226 329 -50 5 854 496 226 45 45 chr13 35315451 35315585 -84968727 - RSINE1 SINE B4 -30 135 2 5 854 564 42 0 0 chr13 35316669 35316740 -84967572 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 854 1304 145 18 9 chr13 35317739 35317962 -84966350 + URR1A DNA MER1_type 1 225 -1 5 854 275 363 51 0 chr13 35317995 35318152 -84966160 - MER5A DNA MER1_type -22 167 3 5 854 1320 272 54 38 chr13 35318261 35318685 -84965627 + Tigger7 DNA MER2_type 5 435 -2056 5 854 328 329 113 23 chr13 35319213 35319390 -84964922 + MT2A LTR ERVL 341 533 0 5 854 2007 119 6 9 chr13 35319499 35319814 -84964498 + ORR1A2 LTR MaLR 1 314 -13 5 854 198 0 0 0 chr13 35319857 35319879 -84964433 + (TC)n Simple_repeat Simple_repeat 1 22 0 5 854 246 32 0 0 chr13 35319881 35319912 -84964400 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 854 806 139 12 0 chr13 35319912 35320085 -84964227 + (CAGAGA)n Simple_repeat Simple_repeat 3 177 0 5 854 765 78 35 18 chr13 35320440 35320609 -84963703 + (TAGA)n Simple_repeat Simple_repeat 3 174 0 5 854 440 283 108 82 chr13 35320672 35320683 -84963629 - MLT2B2 LTR ERVL -38 517 507 5 854 327 19 19 37 chr13 35320683 35320737 -84963575 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 5 854 994 295 110 39 chr13 35320737 35321197 -84963115 - MLT2B2 LTR ERVL -49 506 4 5 854 512 307 7 0 chr13 35321853 35321993 -84962319 - MER63A DNA AcHobo -60 150 10 5 854 425 317 57 134 chr13 35322376 35322747 -84961565 - ORR1E LTR MaLR -3 356 15 5 854 491 255 67 85 chr13 35322747 35323109 -84961203 + ORR1E LTR MaLR 1 377 -2 5 854 1682 175 6 7 chr13 35323141 35323453 -84960859 + L1_Mm LINE L1 5129 5408 -475 5 854 454 263 115 17 chr13 35324077 35324251 -84960061 + MIRb SINE MIR 55 245 -23 5 854 1016 300 47 22 chr13 35324389 35324750 -84959562 + ORR1D2 LTR MaLR 1 370 0 5 854 207 0 0 0 chr13 35324826 35324849 -84959463 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 5 854 571 289 70 63 chr13 35326437 35326672 -84957640 - MTEb LTR MaLR 0 379 150 5 854 3350 46 2 2 chr13 35326672 35327068 -84957244 + MTA_Mm LTR MaLR 1 396 0 5 854 571 286 321 17 chr13 35327068 35327174 -84957138 - MTEb LTR MaLR -230 149 5 5 854 217 267 47 0 chr13 35327345 35327431 -84956881 - MIR SINE MIR -62 200 111 5 854 197 339 0 0 chr13 35328483 35328545 -84955767 + MIRb SINE MIR 116 177 -91 5 854 454 281 8 16 chr13 35330021 35330144 -84954168 + ID_B1 SINE B4 102 223 -1 5 854 270 81 0 0 chr13 35330153 35330190 -84954122 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 5 854 391 295 82 73 chr13 35331606 35331928 -84952384 - MTEb LTR MaLR -32 347 1 5 854 230 314 14 0 chr13 35333938 35334008 -84950304 + MER91B DNA Tip100 1 71 -119 5 854 2056 156 5 76 chr13 35334287 35334682 -84949630 - ORR1B2 LTR MaLR 0 367 1 5 854 745 272 35 30 chr13 35335207 35335570 -84948742 + RMER15 LTR ERVL 1 485 -90 5 854 693 200 13 76 chr13 35335725 35335882 -84948430 + B1_Mur1 SINE Alu 2 148 -1 5 854 180 77 0 0 chr13 35335883 35335909 -84948403 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 5 854 310 310 43 10 chr13 35337929 35338126 -84946186 - L1ME2 LINE L1 -28 6151 5953 5 854 539 288 36 25 chr13 35338226 35338422 -84945890 + B3A SINE B2 1 198 0 5 854 291 140 0 0 chr13 35338516 35338566 -84945746 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 854 333 182 0 0 chr13 35338691 35338790 -84945522 + (CA)n Simple_repeat Simple_repeat 2 100 0 5 854 211 389 35 0 chr13 35339013 35339157 -84945155 + L2c LINE L2 3228 3376 -11 5 854 1491 161 50 53 chr13 35339253 35339613 -84944699 + ORR1B2 LTR MaLR 1 359 -8 5 854 600 282 38 33 chr13 35339875 35340088 -84944224 + B4A SINE B4 1 214 -78 5 854 428 354 0 0 chr13 35340088 35340235 -84944077 + (CA)n Simple_repeat Simple_repeat 2 148 0 5 854 1873 188 79 0 chr13 35342137 35342493 -84941819 + ORR1C2 LTR MaLR 1 384 0 5 854 4949 218 62 35 chr13 35342493 35343672 -84940640 + ORR1C2-int LTR MaLR 1 1221 -149 5 854 3047 38 11 0 chr13 35343672 35344042 -84940270 + L1Md_F2 LINE L1 6209 6582 0 5 854 4949 218 62 35 chr13 35344042 35344196 -84940116 + ORR1C2-int LTR MaLR 1222 1370 0 5 854 1527 186 189 0 chr13 35344196 35344519 -84939793 + ORR1C2 LTR MaLR 1 384 0 5 854 402 176 32 40 chr13 35344586 35344693 -84939619 - PB1D10 SINE Alu -21 128 11 5 854 1638 240 56 58 chr13 35344693 35345413 -84938899 - RMER19C LTR ERVK 0 737 18 5 854 736 203 20 0 chr13 35346163 35346311 -84938001 + ORR1C2-int LTR MaLR 331 481 -1028 5 854 221 204 0 0 chr13 35346893 35346937 -84937375 - ID SINE ID -158 66 23 5 854 22 0 0 0 chr13 35347059 35347081 -84937231 + AT_rich Low_complexity Low_complexity 1 22 0 5 854 1449 261 17 59 chr13 35347116 35347588 -84936724 - RMER5 LTR ERV1 -15 519 68 5 854 421 219 191 0 chr13 35347948 35348053 -84936259 + RSINE1 SINE B4 4 128 -37 5 854 423 0 0 0 chr13 35348067 35348114 -84936198 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 854 274 319 118 25 chr13 35348396 35348557 -84935755 - MLT1A LTR MaLR -11 363 188 5 854 223 0 79 26 chr13 35348676 35348714 -84935598 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 5 854 239 277 56 56 chr13 35348714 35348821 -84935491 + RMER15 LTR ERVL 452 558 -17 5 854 472 293 42 62 chr13 35348833 35349026 -84935286 + L1ME3A LINE L1 5890 6078 -95 5 854 364 242 0 32 chr13 35349044 35349198 -84935114 + GA-rich Low_complexity Low_complexity 3 151 0 5 854 378 242 21 42 chr13 35349218 35349313 -84934999 - B1F SINE Alu -51 98 6 5 854 447 19 0 0 chr13 35349989 35350041 -84934271 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 854 366 254 0 0 chr13 35350146 35350256 -84934056 + (CATATA)n Simple_repeat Simple_repeat 5 114 0 5 854 1506 222 58 28 chr13 35352523 35352885 -84931427 - ORR1D1 LTR MaLR 0 374 2 5 854 2579 230 79 18 chr13 35352900 35353561 -84930751 - ORR1D1-int LTR MaLR -31 1339 639 5 854 306 73 0 0 chr13 35353561 35353602 -84930710 + (TTAA)n Simple_repeat Simple_repeat 2 42 0 5 854 368 245 0 62 chr13 35353602 35353715 -84930597 - Lx4B LINE L1 -14 7044 6939 5 854 291 114 0 0 chr13 35353715 35353759 -84930553 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 854 3776 208 36 7 chr13 35353759 35354527 -84929785 - Lx5 LINE L1 -382 6668 5878 5 854 322 224 134 87 chr13 35354527 35354654 -84929658 - ORR1D1-int LTR MaLR -1223 147 15 5 854 1755 198 30 27 chr13 35354668 35355041 -84929271 - ORR1D1 LTR MaLR 0 374 1 5 854 214 186 23 0 chr13 35355834 35355877 -84928435 - L2c LINE L2 -3 3384 3341 5 854 804 292 204 12 chr13 35356542 35356875 -84927437 + MTC LTR MaLR 13 409 -12 5 854 324 310 0 50 chr13 35357527 35357646 -84926666 - PB1D10 SINE Alu 0 117 5 5 854 289 289 0 62 chr13 35357653 35357749 -84926563 - BC1_Mm scRNA scRNA -61 91 2 5 854 189 229 42 0 chr13 35357884 35357932 -84926380 - MIR SINE MIR -95 167 118 5 854 1049 112 7 0 chr13 35358905 35359057 -84925255 - L1_Mur2 LINE L1 -1291 4586 4434 5 854 246 202 88 22 chr13 35359054 35359145 -84925167 + Lx5 LINE L1 6954 7050 0 5 854 186 71 0 0 chr13 35359362 35359390 -84924922 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 854 731 222 130 16 chr13 35361908 35362138 -84922174 - ORR1C2 LTR MaLR 0 384 127 5 854 34343 67 3 11 chr13 35362138 35367286 -84917026 + L1Md_F3 LINE L1 489 5586 -297 5 854 8515 36 0 8 chr13 35367286 35368292 -84916020 + L1Md_F3 LINE L1 5587 6584 0 5 854 780 138 48 75 chr13 35368301 35368314 -84915998 - ORR1C2 LTR MaLR -197 187 176 5 854 3325 53 2 0 chr13 35368314 35368709 -84915603 + MTA_Mm LTR MaLR 1 396 0 5 854 8663 47 23 15 chr13 35368709 35369798 -84914514 + MTA_Mm-int LTR MaLR 1 1098 0 5 854 3379 43 2 0 chr13 35369798 35370193 -84914119 + MTA_Mm LTR MaLR 1 396 0 5 854 780 138 48 75 chr13 35370193 35370365 -84913947 - ORR1C2 LTR MaLR -209 175 7 5 854 663 263 19 0 chr13 35370408 35370564 -84913748 + RSINE1 SINE B4 3 161 -4 5 854 372 281 20 27 chr13 35370637 35370787 -84913525 - L1ME3A LINE L1 -5 6168 6020 5 854 328 217 0 0 chr13 35370822 35370882 -84913430 - B3 SINE B2 -155 61 2 5 854 444 222 11 0 chr13 35370884 35370974 -84913338 - 4.5SRNA scRNA scRNA -3 91 1 5 854 353 260 0 37 chr13 35370974 35371110 -84913202 + Lx7 LINE L1 7566 7696 0 5 854 234 202 19 136 chr13 35371655 35371758 -84912554 + MER57D LTR ERV1 314 404 -7 5 854 2471 132 35 53 chr13 35371826 35372529 -84911783 + RMER17D LTR ERVK 1 737 -14 5 854 1175 174 38 0 chr13 35372548 35372760 -84911552 + URR1B DNA MER1_type 6 225 0 5 854 1052 102 6 0 chr13 35373601 35373758 -84910554 - B2_Mm1t SINE B2 -24 169 12 5 854 736 97 210 0 chr13 35373758 35373882 -84910430 + L1Md_F2 LINE L1 6421 6570 -12 5 854 447 344 12 6 chr13 35374302 35374463 -84909849 + B4 SINE B4 10 171 -121 5 854 463 96 12 12 chr13 35374545 35374629 -84909683 + (CA)n Simple_repeat Simple_repeat 1 84 0 5 854 1849 194 105 0 chr13 35374840 35375221 -84909091 + MTC LTR MaLR 1 421 0 5 854 658 300 6 12 chr13 35375338 35375500 -84908812 + RSINE1 SINE B4 3 163 -2 5 854 516 367 34 34 chr13 35375962 35376377 -84907935 + ERVL-int LTR ERVL 3438 3852 -1905 5 854 894 252 259 0 chr13 35376574 35376875 -84907437 - MTE2a LTR MaLR 0 379 1 5 854 649 321 31 59 chr13 35377113 35377335 -84906977 - B4A SINE B4 -68 224 9 5 854 988 287 51 24 chr13 35377399 35377735 -84906577 - ORR1E LTR MaLR -12 347 3 5 854 296 202 81 35 chr13 35378977 35379064 -84905248 + RMER21B LTR ERV1 407 497 -345 5 854 250 371 0 10 chr13 35379260 35379358 -84904954 + B4A SINE B4 186 282 -10 5 854 277 268 23 11 chr13 35379376 35379463 -84904849 + (CA)n Simple_repeat Simple_repeat 1 88 0 5 854 186 71 0 0 chr13 35379477 35379505 -84904807 + (GA)n Simple_repeat Simple_repeat 1 28 0 6 854 272 310 119 25 chr13 35379795 35379954 -84904358 - ORR1E LTR MaLR -162 197 24 6 854 188 329 49 0 chr13 35380347 35380429 -84903883 - L2a LINE L2 -3 3423 3338 6 854 244 273 122 13 chr13 35381156 35381312 -84903000 + MLT1D LTR MaLR 180 352 -153 6 854 472 292 166 12 chr13 35381735 35381994 -84902318 - L1MA4A LINE L1 -379 5924 5546 6 854 758 266 39 4 chr13 35382015 35382249 -84902063 - L1_Mur3 LINE L1 -1314 4566 4325 6 854 3350 161 29 33 chr13 35382249 35382879 -84901433 - RMER19B LTR ERVK 0 902 276 6 854 1054 274 131 8 chr13 35382883 35383296 -84901016 - RMER1A Other Other -613 417 1 6 854 1565 218 72 9 chr13 35383373 35383693 -84900619 - RMER1B Other Other -680 386 47 6 854 3991 162 170 10 chr13 35383790 35384673 -84899639 + RLTR25B LTR ERVK 3 1026 -2 6 854 2355 64 0 0 chr13 35385166 35385510 -84898802 - L1Md_A LINE L1 0 6582 6287 6 854 6983 19 0 0 chr13 35385510 35386310 -84898002 + L1_Mm LINE L1 3527 4326 -1557 6 854 573 55 0 0 chr13 35386310 35386383 -84897929 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 6 854 220 349 0 44 chr13 35386428 35386563 -84897749 + CT-rich Low_complexity Low_complexity 2 130 0 6 854 1246 285 160 4 chr13 35386851 35387326 -84896986 + Lx8 LINE L1 6363 6911 -562 6 854 232 321 93 93 chr13 35387326 35387477 -84896835 + B4A SINE B4 2 152 -140 6 854 324 70 0 0 chr13 35387591 35387634 -84896678 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 854 528 16 0 0 chr13 35387634 35387694 -84896618 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 854 1002 260 118 50 chr13 35387786 35388150 -84896162 + Lx8 LINE L1 6897 7285 -188 6 854 297 0 0 0 chr13 35388193 35388226 -84896086 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 854 315 0 0 0 chr13 35388226 35388260 -84896052 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 854 28 71 0 0 chr13 35388382 35388438 -84895874 + AT_rich Low_complexity Low_complexity 1 56 0 6 854 1387 280 55 14 chr13 35388440 35389127 -84895185 + L1MA5 LINE L1 3554 4325 -1818 6 106 2334 260 38 19 chr13 35389129 35389796 -84894516 + Lx8 LINE L1 6594 7272 -201 6 855 215 254 15 0 chr13 35389799 35389866 -84894446 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 855 1162 277 115 42 chr13 35390029 35391501 -84892811 + L1MA5 LINE L1 4316 5904 -396 6 855 212 0 36 0 chr13 35391501 35391529 -84892783 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 855 272 258 121 7 chr13 35391795 35391949 -84892363 + L1MEe LINE L1 2382 2539 -3607 6 855 694 269 7 0 chr13 35392408 35392553 -84891759 + B3 SINE B2 2 147 -69 6 855 423 0 0 0 chr13 35392555 35392602 -84891710 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 855 1115 237 56 46 chr13 35392683 35392988 -84891324 + RLTR18 LTR ERVK 1 308 -308 6 855 1072 228 129 76 chr13 35392959 35393315 -84890997 + RLTR18 LTR ERVK 138 512 0 6 855 611 208 147 13 chr13 35393322 35393478 -84890834 + ORR1E LTR MaLR 1 177 -182 6 855 414 0 0 0 chr13 35393642 35393688 -84890624 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 855 845 313 55 19 chr13 35393916 35394536 -84889776 + L1MEe LINE L1 3321 3962 -2184 6 855 485 204 34 50 chr13 35394542 35394661 -84889651 - MTC LTR MaLR 0 421 305 6 855 1537 163 147 3 chr13 35394665 35394891 -84889421 - ORR1B2 LTR MaLR -8 359 111 6 855 342 0 0 0 chr13 35394891 35394929 -84889383 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 855 1537 163 147 3 chr13 35394929 35395015 -84889297 - ORR1B2 LTR MaLR -257 110 2 6 855 1517 185 105 4 chr13 35395015 35395292 -84889020 - MTC LTR MaLR -116 305 1 6 855 2512 195 78 53 chr13 35395292 35395369 -84888943 - MTC-int LTR MaLR 0 1258 1181 6 855 459 35 0 0 chr13 35395369 35395426 -84888886 + (CA)n Simple_repeat Simple_repeat 1 57 0 6 855 2512 204 70 69 chr13 35395426 35396189 -84888123 - MTC-int LTR MaLR -78 1180 300 6 855 399 85 0 0 chr13 35396190 35396249 -84888063 - L1_Mm LINE L1 -570 5313 5255 6 855 4017 96 83 13 chr13 35396249 35396874 -84887438 + L1Md_F2 LINE L1 5914 6582 0 6 855 596 256 126 11 chr13 35396880 35397062 -84887250 + MTD LTR MaLR 196 398 -21 6 855 847 34 0 0 chr13 35397119 35397236 -84887076 + L1Md_F2 LINE L1 6464 6580 -2 6 855 34 55 0 0 chr13 35397236 35397291 -84887021 + AT_rich Low_complexity Low_complexity 1 55 0 6 855 780 244 148 9 chr13 35397450 35397802 -84886510 + L1MCa LINE L1 2096 2496 -3888 6 855 4134 241 64 20 chr13 35398043 35398202 -84886110 + Lx9 LINE L1 6241 6424 -1220 6 855 457 30 0 29 chr13 35398202 35398271 -84886041 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 6 855 4134 241 64 20 chr13 35398271 35399296 -84885016 + Lx9 LINE L1 6425 7476 -168 6 855 342 98 0 0 chr13 35399309 35399360 -84884952 + (CCA)n Simple_repeat Simple_repeat 1 51 0 6 855 941 251 10 15 chr13 35399416 35399622 -84884690 + B3 SINE B2 10 214 -2 6 855 1632 279 92 97 chr13 35399664 35401215 -84883097 + L1MCa LINE L1 2619 4078 -2304 6 855 648 38 0 0 chr13 35401215 35401294 -84883018 + (TTAG)n Simple_repeat Simple_repeat 3 81 0 6 855 652 174 165 0 chr13 35401296 35401417 -84882895 - B1_Mus1 SINE Alu -6 142 2 6 855 1632 279 92 97 chr13 35401417 35402439 -84881873 + L1MCa LINE L1 4079 5181 -1201 6 855 2718 33 6 3 chr13 35403816 35404153 -84880159 - ORR1A0 LTR MaLR -8 338 1 6 855 14085 47 16 1 chr13 35404153 35405918 -84878394 - ORR1A0-int LTR MaLR 0 1792 1 6 855 3000 32 0 0 chr13 35405918 35406264 -84878048 - ORR1A0 LTR MaLR 0 346 1 6 855 294 294 43 21 chr13 35407593 35407687 -84876625 + MER5A DNA MER1_type 65 160 -29 6 855 494 283 76 0 chr13 35408141 35408286 -84876026 + MER74B LTR ERVL 75 230 -392 6 855 638 299 114 16 chr13 35408391 35408707 -84875605 + MER74A LTR ERVL 164 510 -48 6 855 471 295 95 61 chr13 35408915 35409146 -84875166 + MLT1J LTR MaLR 40 278 -234 6 855 452 264 38 0 chr13 35409472 35409578 -84874734 + PB1D10 SINE Alu 7 116 -1 6 855 374 250 26 0 chr13 35409694 35409770 -84874542 - PB1D10 SINE Alu -7 110 33 6 855 230 337 43 33 chr13 35409713 35409805 -84874507 - ID_B1 SINE B4 -53 171 79 6 855 369 0 0 0 chr13 35409817 35409858 -84874454 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 855 568 344 53 77 chr13 35410109 35410600 -84873712 + MLT1J-int LTR MaLR 346 824 -563 6 855 403 280 153 6 chr13 35410683 35410859 -84873453 + MER21B LTR ERV1 47 248 -615 6 855 652 330 55 52 chr13 35410995 35411340 -84872972 + MT2A LTR ERVL 1 346 -187 6 855 680 200 15 9 chr13 35411375 35411523 -84872789 + B1_Mur2 SINE Alu 1 149 0 6 855 9171 209 73 29 chr13 35412123 35413884 -84870428 + L1_Rod LINE L1 443 2273 -3574 6 855 1009 172 121 5 chr13 35413884 35414083 -84870229 + URR1A DNA MER1_type 5 226 0 6 855 9171 193 77 39 chr13 35414083 35415239 -84869073 + L1_Rod LINE L1 2274 3429 -2418 6 855 210 71 0 0 chr13 35415239 35415267 -84869045 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 855 9171 193 77 39 chr13 35415267 35415737 -84868575 + L1_Rod LINE L1 3430 3975 -1872 6 855 972 209 62 29 chr13 35415733 35416009 -84868303 + Lx5 LINE L1 6766 7050 0 6 855 3288 190 81 72 chr13 35416014 35416247 -84868065 + L1_Rod LINE L1 3944 4180 -1667 6 855 2621 39 2 209 chr13 35416247 35416734 -84867578 + RLTR10 LTR ERVK 1 386 -4 6 855 3288 190 81 72 chr13 35416734 35417626 -84866686 + L1_Rod LINE L1 4181 5079 -768 6 855 486 246 88 46 chr13 35417629 35417666 -84866646 + ID SINE ID 46 82 -142 6 855 735 165 16 0 chr13 35417666 35417787 -84866525 + B1_Mus1 SINE Alu 2 124 -24 6 855 272 286 0 0 chr13 35417788 35417865 -84866447 + GA-rich Low_complexity Low_complexity 1 77 0 6 855 497 189 205 8 chr13 35417865 35418060 -84866252 + L1_Rod LINE L1 5117 5407 -893 6 855 411 313 60 35 chr13 35418194 35418479 -84865833 + Charlie7 DNA MER1_type 396 687 -1925 6 855 348 308 52 104 chr13 35418566 35418758 -84865554 - MLT1J LTR MaLR -103 409 228 6 855 387 0 0 0 chr13 35419397 35419440 -84864872 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 855 418 349 121 46 chr13 35419447 35419819 -84864493 - MamGypLTR1c LTR Gypsy -21 782 383 6 855 2812 100 87 14 chr13 35419923 35420361 -84863951 - Lx2 LINE L1 0 6997 6528 6 855 660 298 29 46 chr13 35421443 35421544 -84862768 + L1MA5A LINE L1 3255 3355 -2788 6 855 1827 166 91 23 chr13 35421544 35421896 -84862416 + RLTR30 LTR ERV1 4 379 0 6 855 660 298 29 46 chr13 35421896 35422142 -84862170 + L1MA5A LINE L1 3356 3596 -2547 6 855 3203 130 36 126 chr13 35422333 35422446 -84861866 - MT2B LTR ERVL 0 601 518 6 855 3694 83 17 8 chr13 35422446 35422977 -84861335 - L1_Mus1 LINE L1 -1 6566 6031 6 855 3203 130 36 126 chr13 35422977 35423523 -84860789 - MT2B LTR ERVL -84 517 1 6 855 245 212 291 12 chr13 35423603 35423689 -84860623 + MTEa LTR MaLR 256 365 -14 6 855 535 274 141 130 chr13 35423714 35424211 -84860101 + L1MA5A LINE L1 3609 4143 -2000 6 855 404 69 0 49 chr13 35424211 35424272 -84860040 - B1_Mm SINE Alu 0 147 90 6 855 535 274 141 130 chr13 35424272 35424674 -84859638 + L1MA5A LINE L1 4144 4578 -1565 6 855 875 241 33 36 chr13 35424824 35425189 -84859123 + L1MA5A LINE L1 4592 4955 -1188 6 855 417 297 82 45 chr13 35425186 35425652 -84858660 + L1MA5A LINE L1 5815 6297 0 6 855 1162 224 0 0 chr13 35425804 35426014 -84858298 + B3 SINE B2 2 211 -5 6 855 420 280 43 113 chr13 35426406 35426591 -84857721 - MIRb SINE MIR -59 209 38 6 855 574 192 0 9 chr13 35426706 35426811 -84857501 + MER5B DNA MER1_type 74 177 -1 6 855 604 249 140 81 chr13 35427155 35427513 -84856799 + MTE2b LTR MaLR 1 379 0 6 855 216 167 19 111 chr13 35427603 35427657 -84856655 + ID2 SINE ID 25 73 -10 6 855 258 32 0 0 chr13 35427658 35427689 -84856623 + (TAA)n Simple_repeat Simple_repeat 3 33 0 6 855 237 288 75 23 chr13 35428450 35428624 -84855688 + L1MEg LINE L1 1289 1471 -4613 6 855 818 293 26 17 chr13 35428855 35429088 -84855224 + B4 SINE B4 5 239 -53 6 855 432 0 0 0 chr13 35429103 35429151 -84855161 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 855 464 308 62 39 chr13 35429151 35429509 -84854803 + L1M2 LINE L1 2145 2510 -3633 6 855 1084 258 91 22 chr13 35429651 35430111 -84854201 + L1_Mur3 LINE L1 3768 4259 -1621 6 855 786 158 121 6 chr13 35430117 35430283 -84854029 + ORR1D1 LTR MaLR 190 374 0 6 855 597 276 111 22 chr13 35430284 35430654 -84853658 + L1M2 LINE L1 4295 4697 -1446 6 855 400 321 0 19 chr13 35430723 35430831 -84853481 - B4 SINE B4 -181 111 6 6 855 370 289 124 55 chr13 35430894 35431095 -84853217 - RMER15 LTR ERVL -14 561 347 6 855 1033 110 219 6 chr13 35431149 35431332 -84852980 + URR1A DNA MER1_type 5 226 0 6 855 23 0 0 0 chr13 35431925 35431948 -84852364 + AT_rich Low_complexity Low_complexity 1 23 0 6 855 558 283 98 60 chr13 35432936 35433273 -84851039 + MLT1A0 LTR MaLR 7 388 -2 6 855 703 157 0 56 chr13 35433416 35433558 -84850754 - Lx7 LINE L1 0 7696 7563 6 855 1100 61 0 39 chr13 35434089 35434242 -84850070 + B1_Mus2 SINE Alu 1 147 0 6 855 226 225 0 0 chr13 35434242 35434282 -84850030 + polypurine Low_complexity Low_complexity 3 42 0 6 855 222 91 0 0 chr13 35434519 35434552 -84849760 + (TCC)n Simple_repeat Simple_repeat 2 34 0 6 855 218 281 157 12 chr13 35434553 35434636 -84849676 - PB1D10 SINE Alu 0 117 23 6 855 669 288 89 40 chr13 35434685 35435033 -84849279 - MLT1A0 LTR MaLR 0 365 1 7 855 184 258 118 29 chr13 35435485 35435553 -84848759 - L2b LINE L2 -298 3077 3004 7 855 1123 148 5 31 chr13 35435667 35435862 -84848450 - URR1A DNA MER1_type -2 224 35 7 855 275 317 122 10 chr13 35436391 35436532 -84847780 + Charlie2a DNA MER1_type 33 181 -2680 7 855 496 329 41 8 chr13 35436738 35436980 -84847332 + Charlie2a DNA MER1_type 750 999 -1862 7 855 243 300 43 0 chr13 35437921 35437991 -84846321 + ID4_ SINE ID 7 79 -4 7 855 1786 137 54 90 chr13 35438757 35439181 -84845131 + RMER17C LTR ERVK 1 409 -1 7 855 246 312 75 0 chr13 35439848 35439928 -84844384 + PB1 SINE Alu 31 116 -11 7 855 369 0 0 0 chr13 35440173 35440214 -84844098 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 855 270 176 0 0 chr13 35440734 35440785 -84843527 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 855 2849 73 32 15 chr13 35441756 35442160 -84842152 - RLTR10A LTR ERVK 0 411 1 7 855 7681 75 7 4 chr13 35442793 35444279 -84840033 - L1Md_F2 LINE L1 0 6582 5092 7 855 27967 59 110 3 chr13 35444275 35448209 -84836103 - L1Md_F3 LINE L1 -2 6582 2072 7 855 315 0 0 0 chr13 35448209 35448244 -84836068 + (TTG)n Simple_repeat Simple_repeat 2 36 0 7 855 27967 69 148 3 chr13 35448244 35448337 -84835975 - L1Md_F3 LINE L1 -3812 2071 1979 7 855 230 56 28 0 chr13 35448337 35448373 -84835939 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 7 855 27967 104 83 28 chr13 35448373 35449759 -84834553 - L1Md_F3 LINE L1 -3905 1978 394 7 855 567 246 25 0 chr13 35449782 35449900 -84834412 + RSINE1 SINE B4 3 123 -42 7 855 243 0 0 0 chr13 35449919 35449946 -84834366 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 855 372 260 210 12 chr13 35451053 35451232 -84833080 + MLT1C LTR MaLR 278 470 -35 7 855 458 255 64 45 chr13 35452198 35452276 -84832036 + MLT1B LTR MaLR 15 97 -293 7 855 1441 295 61 8 chr13 35452276 35452318 -84831994 - MT2A LTR ERVL 0 533 491 7 855 561 30 0 0 chr13 35452318 35452385 -84831927 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 7 855 1441 295 61 8 chr13 35452385 35452848 -84831464 - MT2A LTR ERVL -43 490 2 7 855 458 255 64 45 chr13 35452848 35452925 -84831387 + MLT1B LTR MaLR 98 173 -217 7 855 258 0 71 0 chr13 35453298 35453340 -84830972 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 7 855 567 0 0 0 chr13 35453497 35453560 -84830752 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 855 993 110 0 0 chr13 35453563 35453709 -84830603 + ORR1B1 LTR MaLR 198 343 -51 7 855 729 0 0 0 chr13 35453732 35453813 -84830499 + (GAA)n Simple_repeat Simple_repeat 2 82 0 7 855 870 33 208 0 chr13 35453813 35453933 -84830379 + B1_Mm SINE Alu 3 147 0 7 855 23 0 0 0 chr13 35453933 35453956 -84830356 + AT_rich Low_complexity Low_complexity 1 23 0 7 855 1019 120 0 33 chr13 35453991 35454172 -84830140 + (TA)n Simple_repeat Simple_repeat 1 175 0 7 855 299 234 36 92 chr13 35454520 35454669 -84829643 - MLT1A0 LTR MaLR -231 143 3 7 855 290 346 38 8 chr13 35455792 35455923 -84828389 + ID_B1 SINE B4 87 221 -3 7 855 232 309 0 29 chr13 35455933 35456003 -84828309 + ID4_ SINE ID 2 69 -14 7 855 192 40 0 0 chr13 35456003 35456028 -84828284 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 7 855 24 32 0 0 chr13 35456160 35456191 -84828121 + AT_rich Low_complexity Low_complexity 1 31 0 7 855 474 18 0 0 chr13 35456458 35456513 -84827799 + (GTTTG)n Simple_repeat Simple_repeat 5 59 0 7 855 364 277 89 32 chr13 35457121 35457244 -84827068 - MER5A1 DNA MER1_type -21 145 16 7 855 291 316 10 30 chr13 35457848 35457949 -84826363 - MER20 DNA MER1_type 0 219 121 7 855 396 40 0 0 chr13 35457955 35458005 -84826307 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 855 263 26 51 0 chr13 35458005 35458044 -84826268 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 7 855 801 210 484 21 chr13 35458150 35458433 -84825879 + MTD LTR MaLR 5 405 -14 7 855 970 265 101 40 chr13 35458438 35458843 -84825469 - RMER5 LTR ERV1 -73 461 32 7 855 321 153 47 0 chr13 35459199 35459284 -84825028 + CT-rich Low_complexity Low_complexity 3 91 0 7 855 252 312 57 21 chr13 35460400 35460541 -84823771 + L1M5 LINE L1 5701 5846 -278 7 855 272 331 95 16 chr13 35460773 35460899 -84823413 + MTE2a LTR MaLR 1 136 -243 7 855 410 349 8 0 chr13 35460975 35461107 -84823205 + MT2A LTR ERVL 304 436 -97 7 855 218 32 32 0 chr13 35461197 35461228 -84823084 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 855 246 324 67 33 chr13 35461288 35461438 -84822874 + MLT1E LTR MaLR 14 168 -485 7 855 24556 118 36 9 chr13 35461482 35463363 -84820949 - Lx LINE L1 -7 6647 4738 7 855 612 40 0 0 chr13 35463363 35463438 -84820874 + (TTTTG)n Simple_repeat Simple_repeat 2 76 0 7 855 24556 150 48 15 chr13 35463438 35465001 -84819311 - Lx LINE L1 -1146 4737 3066 7 855 645 38 0 0 chr13 35465001 35465081 -84819231 + (TTC)n Simple_repeat Simple_repeat 3 82 0 7 855 24556 150 48 15 chr13 35465081 35465149 -84819163 - Lx LINE L1 -2818 3065 2995 7 855 210 37 0 0 chr13 35465149 35465176 -84819136 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 855 24556 150 48 15 chr13 35465176 35466864 -84817448 - Lx LINE L1 -2889 2994 1267 7 855 186 43 0 0 chr13 35466864 35466887 -84817425 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 855 1148 52 0 0 chr13 35466887 35467023 -84817289 - B1_Mus1 SINE Alu -11 137 2 7 855 24556 147 35 52 chr13 35467023 35467541 -84816771 - Lx LINE L1 -5384 1273 755 7 855 415 337 59 6 chr13 35467584 35467754 -84816558 - B3A SINE B2 -16 182 4 7 855 484 315 65 18 chr13 35467851 35468068 -84816244 + MLT1E1 LTR MaLR 428 654 0 7 855 1113 302 89 11 chr13 35468441 35468935 -84815377 + Tigger7 DNA MER2_type 13 550 0 7 855 474 255 87 56 chr13 35469369 35469564 -84814748 + MLT1A LTR MaLR 1 201 -173 7 855 1710 231 9 57 chr13 35469984 35470406 -84813906 + MTD LTR MaLR 4 405 -14 7 855 1531 194 216 32 chr13 35472201 35472669 -84811643 - RMER15 LTR ERVL 0 575 22 7 855 362 320 117 14 chr13 35472811 35473033 -84811279 - MLT1A LTR MaLR -102 272 28 7 855 276 30 0 0 chr13 35473095 35473128 -84811184 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 855 24 0 0 0 chr13 35473428 35473452 -84810860 + AT_rich Low_complexity Low_complexity 1 24 0 7 855 378 0 0 0 chr13 35473541 35473583 -84810729 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 855 434 305 57 20 chr13 35473590 35473838 -84810474 + MER65D LTR ERV1 194 450 -23 7 855 279 268 11 11 chr13 35475041 35475128 -84809184 - MTEb LTR MaLR -14 365 279 7 855 266 219 36 24 chr13 35475198 35475282 -84809030 + GA-rich Low_complexity Low_complexity 1 85 0 7 855 267 294 205 6 chr13 35475791 35475952 -84808360 - MLT1A LTR MaLR -8 366 174 7 855 413 286 63 0 chr13 35476318 35476444 -84807868 - L1MA9 LINE L1 -390 5922 5789 7 855 484 294 34 29 chr13 35476977 35477184 -84807128 - L1MA9 LINE L1 -840 5300 5093 7 855 398 275 112 25 chr13 35477375 35477543 -84806769 - MLT1A LTR MaLR -208 182 4 7 855 459 0 0 0 chr13 35477762 35477813 -84806499 + (TC)n Simple_repeat Simple_repeat 2 52 0 7 855 894 58 8 0 chr13 35480060 35480180 -84804132 + B2_Mm1t SINE B2 2 122 -71 7 855 408 20 0 0 chr13 35480184 35480233 -84804079 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 7 855 234 0 0 0 chr13 35480323 35480349 -84803963 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 855 885 210 56 38 chr13 35480349 35480616 -84803696 - Lx9 LINE L1 -170 7474 7203 7 855 295 196 18 0 chr13 35480831 35480887 -84803425 - MLT2D LTR ERVL -48 511 455 7 855 325 269 218 18 chr13 35480900 35481070 -84803242 - MLT2D LTR ERVL -176 238 35 7 855 520 320 121 77 chr13 35482308 35482735 -84801577 - MLT1E2 LTR MaLR -38 589 82 7 855 296 24 24 0 chr13 35482735 35482776 -84801536 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 855 489 320 121 77 chr13 35482776 35482845 -84801467 - MLT1E2 LTR MaLR -479 81 7 7 855 679 265 111 87 chr13 35483573 35484075 -84800237 + RLTR18B LTR ERVK 9 616 0 7 855 241 250 125 45 chr13 35485291 35485379 -84798933 - MLT1A0 LTR MaLR -270 95 1 7 855 781 239 128 28 chr13 35485380 35485667 -84798645 - MLT1B LTR MaLR -17 373 58 7 855 542 269 101 54 chr13 35485667 35485965 -84798347 - Tigger7 DNA MER2_type 0 2491 2180 7 855 505 296 359 34 chr13 35485974 35486322 -84797990 - Tigger7 DNA MER2_type -1913 578 118 7 855 592 283 79 85 chr13 35486302 35486642 -84797670 + MTEb LTR MaLR 42 379 0 7 855 590 262 17 11 chr13 35486764 35486938 -84797374 - MER53 DNA hAT -15 178 4 7 855 292 280 149 64 chr13 35488632 35488773 -84795539 + RSINE1 SINE B4 13 165 0 7 855 234 150 0 0 chr13 35488792 35488832 -84795480 + (CACG)n Simple_repeat Simple_repeat 4 43 0 7 855 216 0 0 0 chr13 35489015 35489039 -84795273 + (T)n Simple_repeat Simple_repeat 1 24 0 7 855 292 244 183 44 chr13 35489039 35489219 -84795093 - MLT1J LTR MaLR -2 510 306 7 855 585 161 13 7 chr13 35489653 35489803 -84794509 + (TA)n Simple_repeat Simple_repeat 2 152 0 7 855 1764 161 131 18 chr13 35490545 35490874 -84793438 - ORR1B2 LTR MaLR -1 366 1 7 855 443 250 62 0 chr13 35491200 35491296 -84793016 + PB1D10 SINE Alu 1 102 -15 7 855 305 26 0 0 chr13 35491516 35491555 -84792757 + B2_Mm2 SINE B2 3 41 -154 7 855 2127 62 30 49 chr13 35491556 35491648 -84792664 - L1_Mur1 LINE L1 -1119 4767 4684 7 855 481 92 11 0 chr13 35491648 35491735 -84792577 - L1Md_F3 LINE L1 -14 6570 6483 7 855 2127 62 30 49 chr13 35491735 35491946 -84792366 - Lx3A LINE L1 -1203 4683 4470 7 855 7916 88 14 7 chr13 35491943 35492479 -84791833 + Lx3A LINE L1 4771 5309 -577 7 855 3364 48 0 2 chr13 35492479 35492876 -84791436 - MTA_Mm LTR MaLR 0 396 1 7 855 7995 108 48 23 chr13 35492876 35494504 -84789808 + Lx3A LINE L1 5310 6973 -8 7 855 30 0 0 0 chr13 35494507 35494537 -84789775 + AT_rich Low_complexity Low_complexity 1 30 0 7 855 916 69 26 46 chr13 35494539 35494668 -84789644 + B2_Mm2 SINE B2 27 154 -41 7 855 329 0 0 24 chr13 35494668 35494710 -84789602 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 7 855 916 69 26 46 chr13 35494710 35494732 -84789580 + B2_Mm2 SINE B2 155 175 -20 7 855 1019 162 154 23 chr13 35494841 35495107 -84789205 + ORR1D1 LTR MaLR 74 374 0 7 855 1772 192 63 16 chr13 35495692 35496057 -84788255 + ORR1C2 LTR MaLR 1 382 -2 7 855 422 305 39 92 chr13 35496687 35496947 -84787365 + L1MA10 LINE L1 6028 6273 -61 7 855 493 289 90 43 chr13 35496997 35497297 -84787015 + L1MB8 LINE L1 5859 6172 -6 7 855 387 41 0 0 chr13 35497840 35497889 -84786423 + (TTA)n Simple_repeat Simple_repeat 1 49 0 7 855 8269 40 2 3 chr13 35498580 35500000 -84784312 - L1Md_F2 LINE L1 0 6582 5247 7 855 31774 62 2 10 chr13 35500000 35504639 -84779673 - L1Md_A LINE L1 -637 5246 651 1 855 28 48 0 0 chr13 35504964 35505006 -84779306 + AT_rich Low_complexity Low_complexity 1 42 0 2 855 1106 280 63 4 chr13 35505006 35505344 -84778968 - MTEa LTR MaLR -20 359 1 3 855 888 261 5 27 chr13 35506679 35506900 -84777412 - B3 SINE B2 0 216 1 4 855 258 32 0 0 chr13 35507149 35507180 -84777132 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 855 959 263 118 10 chr13 35507187 35507696 -84776616 - L1MA9 LINE L1 -147 6165 5593 6 855 1384 208 99 39 chr13 35507690 35508105 -84776207 - L1MB3 LINE L1 -2 6181 5742 7 855 1414 265 35 20 chr13 35508856 35509203 -84775109 + ORR1E LTR MaLR 8 359 0 8 855 226 327 125 0 chr13 35510346 35510450 -84773862 + MER5A1 DNA MER1_type 1 117 -49 9 855 724 299 13 9 chr13 35510745 35510971 -84773341 + L1MA6 LINE L1 6063 6289 -11 1 855 251 253 26 26 chr13 35511131 35511208 -84773104 + CT-rich Low_complexity Low_complexity 2 78 0 1 855 612 298 47 6 chr13 35511380 35511549 -84772763 + MER20 DNA MER1_type 44 219 0 1 855 558 359 41 15 chr13 35511680 35511946 -84772366 + MLT1A LTR MaLR 100 372 -2 1 855 784 289 84 12 chr13 35512042 35512375 -84771937 + L1MB8 LINE L1 5821 6177 -1 1 855 279 306 99 27 chr13 35512424 35512646 -84771666 + L2 LINE L2 1812 2049 -1370 1 855 1596 290 88 52 chr13 35513143 35513269 -84771043 - L1_Mur3 LINE L1 -13 5867 5740 1 855 1906 121 3 31 chr13 35513269 35513558 -84770754 - Lx2 LINE L1 0 6997 6717 1 855 1596 290 88 52 chr13 35513558 35514383 -84769929 - L1_Mur3 LINE L1 -111 5769 4870 1 855 453 143 148 87 chr13 35515747 35515862 -84768450 - B1_Mur1 SINE Alu 0 149 28 1 855 221 328 127 12 chr13 35515900 35516073 -84768239 + L2 LINE L2 2887 3079 -340 1 855 345 344 22 0 chr13 35516168 35516258 -84768054 - B4A SINE B4 -78 214 123 1 855 571 289 25 6 chr13 35516477 35516637 -84767675 + RSINE1 SINE B4 3 165 0 2 855 30 0 0 0 chr13 35516762 35516792 -84767520 + AT_rich Low_complexity Low_complexity 1 30 0 2 855 4416 179 19 66 chr13 35516844 35517781 -84766531 - Lx7 LINE L1 0 7696 6804 2 855 212 300 111 0 chr13 35518378 35518468 -84765844 - L2b LINE L2 -6 3369 3270 2 855 670 252 28 7 chr13 35518497 35518641 -84765671 + RSINE1 SINE B4 5 151 -14 2 855 351 78 0 0 chr13 35518738 35518789 -84765523 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 855 1220 249 25 36 chr13 35518916 35519335 -84764977 + L1MA5 LINE L1 5881 6294 -6 2 855 28 0 0 0 chr13 35519335 35519363 -84764949 + AT_rich Low_complexity Low_complexity 1 28 0 2 855 227 329 60 27 chr13 35519457 35519607 -84764705 + MIR SINE MIR 70 224 -38 2 855 189 0 0 0 chr13 35520375 35520396 -84763916 + (CAT)n Simple_repeat Simple_repeat 1 21 0 2 106 320 283 113 0 chr13 35520457 35520563 -84763749 - LTR31 LTR ERV1 -42 577 460 3 856 1058 292 25 25 chr13 35520565 35520938 -84763374 + ORR1E LTR MaLR 1 368 -2 3 856 535 335 50 28 chr13 35521015 35521233 -84763079 - LTR31 LTR ERV1 -252 367 145 3 856 1026 204 321 106 chr13 35521783 35522254 -84762058 + RMER15 LTR ERVL 1 572 -3 3 856 279 0 0 0 chr13 35522564 35522595 -84761717 + (A)n Simple_repeat Simple_repeat 1 31 0 3 856 209 344 93 8 chr13 35524147 35524276 -84760036 - MIR SINE MIR -6 256 117 3 856 441 166 0 22 chr13 35524370 35524435 -84759877 + polypurine Low_complexity Low_complexity 2 64 0 3 856 270 0 0 0 chr13 35524435 35524465 -84759847 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 856 441 166 0 22 chr13 35524465 35524535 -84759777 + polypurine Low_complexity Low_complexity 65 133 0 3 856 648 278 114 5 chr13 35525039 35525249 -84759063 + B4A SINE B4 7 239 -53 3 856 436 307 53 27 chr13 35525249 35525467 -84758845 + Lx8 LINE L1 7085 7305 -391 3 856 241 159 113 28 chr13 35525498 35525569 -84758743 + Lx8 LINE L1 7396 7472 -1 4 856 25 0 0 0 chr13 35525594 35525619 -84758693 + AT_rich Low_complexity Low_complexity 1 25 0 4 856 202 56 27 27 chr13 35525659 35525696 -84758616 + (CCCCCA)n Simple_repeat Simple_repeat 4 40 0 4 856 410 253 81 86 chr13 35526501 35526687 -84757625 - ORR1E LTR MaLR -11 348 164 4 856 292 304 167 12 chr13 35526756 35527002 -84757310 + L1ME1 LINE L1 5896 6179 0 4 856 561 329 141 19 chr13 35527070 35527495 -84756817 + MER97b DNA MER1_type? 381 857 -196 4 856 526 278 7 25 chr13 35527869 35528024 -84756288 + L1MC4a LINE L1 5472 5621 -619 4 856 314 299 19 0 chr13 35528117 35528224 -84756088 + L1M4 LINE L1 652 760 -5782 4 856 753 207 74 0 chr13 35528379 35528514 -84755798 + B1_Mur2 SINE Alu 5 149 0 4 856 254 50 25 0 chr13 35528564 35528604 -84755708 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 856 308 247 67 114 chr13 35528621 35528831 -84755481 + L1M4 LINE L1 3717 3916 -2728 4 856 761 294 66 36 chr13 35529132 35529547 -84754765 + L1MC4a LINE L1 6127 6550 -1445 4 856 262 351 125 0 chr13 35529582 35529750 -84754562 + L1MC4a LINE L1 6653 6841 -1041 4 856 469 254 90 83 chr13 35529889 35530008 -84754304 + L1MC4a LINE L1 7057 7189 -693 4 856 654 211 126 39 chr13 35530008 35530190 -84754122 + B3A SINE B2 1 198 0 5 856 469 254 90 83 chr13 35530190 35530336 -84753976 + L1MC4a LINE L1 7190 7324 -558 4 856 375 343 27 20 chr13 35530361 35530549 -84753763 + L2a LINE L2 3191 3426 0 5 856 334 397 39 16 chr13 35530690 35530872 -84753440 - MER91A DNA Tip100 0 196 11 5 856 1119 85 21 0 chr13 35530957 35531098 -84753214 + B1_Mus1 SINE Alu 4 147 -1 5 856 1615 179 28 34 chr13 35531237 35531561 -84752751 - MTB_Mm LTR MaLR 0 407 86 5 856 387 300 33 0 chr13 35531824 35531944 -84752368 - MTEa LTR MaLR -6 373 250 5 856 22680 125 129 9 chr13 35531951 35537001 -84747311 - L1_Mus3 LINE L1 0 6638 986 5 856 6949 40 5 26 chr13 35537001 35537821 -84746491 + RLTR13B4 LTR ERVK 1 803 0 5 856 3352 194 29 113 chr13 35537821 35538301 -84746011 - L1_Mus3 LINE L1 -5672 985 509 5 856 561 176 0 29 chr13 35538305 35538410 -84745902 - MTB_Mm LTR MaLR -319 102 1 5 856 189 344 10 20 chr13 35538883 35538981 -84745331 - L4 LINE RTE -1205 824 728 5 856 1545 290 52 24 chr13 35539248 35539961 -84744351 + L1MB2 LINE L1 5303 6035 -136 5 856 454 246 23 8 chr13 35540199 35540330 -84743982 + L1MB3 LINE L1 6044 6176 -7 6 856 583 232 181 12 chr13 35540446 35540612 -84743700 + B3A SINE B2 1 194 -4 6 856 1081 64 14 0 chr13 35540654 35540794 -84743518 + B1_Mus2 SINE Alu 6 147 0 6 856 312 148 0 0 chr13 35540794 35540855 -84743457 + (A)n Simple_repeat Simple_repeat 1 61 0 6 856 216 327 0 0 chr13 35541305 35541357 -84742955 + B1F SINE Alu 10 61 -88 6 856 1092 111 0 0 chr13 35541404 35541575 -84742737 + (GGAA)n Simple_repeat Simple_repeat 2 172 0 6 856 886 126 71 36 chr13 35541616 35541756 -84742556 + B1_Mur4 SINE Alu 1 145 -5 6 856 578 297 0 0 chr13 35542649 35542767 -84741545 + PB1D7 SINE Alu 2 119 -1 6 856 863 244 28 0 chr13 35542798 35542974 -84741338 + B3A SINE B2 2 182 -16 6 856 2378 151 33 120 chr13 35542975 35543493 -84740819 - RMER19B LTR ERVK -427 475 3 6 856 297 0 0 0 chr13 35543517 35543550 -84740762 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 856 2120 225 57 19 chr13 35543621 35544082 -84740230 + RLTR20B3 LTR ERVK 1 469 -108 7 856 279 0 0 0 chr13 35544082 35544113 -84740199 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 856 2120 275 61 19 chr13 35544113 35544199 -84740113 + RLTR20B3 LTR ERVK 470 578 0 7 856 1269 165 32 5 chr13 35544234 35544453 -84739859 + URR1B DNA MER1_type 1 225 0 7 856 1107 151 27 0 chr13 35546802 35546987 -84737325 - URR1A DNA MER1_type 0 226 37 7 856 186 240 0 0 chr13 35547650 35547700 -84736612 + GA-rich Low_complexity Low_complexity 3 52 0 7 856 342 279 61 23 chr13 35547829 35547961 -84736351 + L1MA8 LINE L1 6151 6287 -4 7 856 507 278 61 0 chr13 35547992 35548107 -84736205 + RSINE1 SINE B4 3 124 -41 7 856 366 23 0 0 chr13 35548111 35548154 -84736158 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 856 531 31 0 0 chr13 35548325 35548390 -84735922 + (TAG)n Simple_repeat Simple_repeat 1 65 0 7 856 315 0 0 0 chr13 35549929 35549964 -84734348 + (TA)n Simple_repeat Simple_repeat 1 35 0 8 856 742 297 109 19 chr13 35550149 35550471 -84733841 - ORR1E LTR MaLR -6 353 3 8 856 2754 235 34 55 chr13 35550691 35551394 -84732918 + Lx8 LINE L1 6267 6954 -519 8 856 207 202 0 37 chr13 35551855 35551937 -84732375 + GA-rich Low_complexity Low_complexity 2 80 0 8 856 189 0 0 0 chr13 35553771 35553792 -84730520 + (TC)n Simple_repeat Simple_repeat 1 21 0 8 856 245 333 9 61 chr13 35554456 35554550 -84729762 + B1F1 SINE Alu 14 104 -16 8 856 319 197 167 0 chr13 35554600 35554666 -84729646 + ID4 SINE ID 3 79 -4 8 856 314 327 62 18 chr13 35554694 35554806 -84729506 + PB1D9 SINE Alu 4 120 0 8 856 349 250 0 0 chr13 35556891 35556971 -84727341 + PB1D10 SINE Alu 33 112 -5 8 856 617 256 74 26 chr13 35557230 35557419 -84726893 - B3A SINE B2 0 198 1 8 856 300 380 83 3 chr13 35557777 35558065 -84726247 - L1M5 LINE L1 -3632 2514 2204 9 856 261 0 0 0 chr13 35558099 35558128 -84726184 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 856 235 316 63 38 chr13 35558133 35558212 -84726100 - RSINE1 SINE B4 -14 151 71 9 856 333 342 91 73 chr13 35558185 35558408 -84725904 - B4 SINE B4 -59 233 2 9 856 1028 112 51 1 chr13 35558624 35558816 -84725496 - ORR1A2 LTR MaLR 0 394 153 9 856 243 0 0 0 chr13 35559317 35559344 -84724968 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 856 205 143 48 0 chr13 35559581 35559623 -84724689 + (CAGAGA)n Simple_repeat Simple_repeat 2 45 0 9 856 191 316 19 87 chr13 35560516 35560620 -84723692 + L2b LINE L2 3055 3151 -224 9 856 343 282 87 62 chr13 35561069 35561311 -84723001 + L1M5 LINE L1 5255 5502 -622 9 856 369 0 0 0 chr13 35561731 35561772 -84722540 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 856 516 32 0 0 chr13 35561842 35561904 -84722408 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 856 226 222 0 0 chr13 35561926 35561980 -84722332 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 856 413 255 73 13 chr13 35561981 35562132 -84722180 - L1MC4 LINE L1 -956 7086 6927 1 856 592 319 145 27 chr13 35562707 35563155 -84721157 + L1MC4 LINE L1 6566 7086 -956 1 856 215 162 0 0 chr13 35563169 35563206 -84721106 + B4A SINE B4 1 37 -255 1 856 852 261 43 69 chr13 35563229 35563253 -84721059 + B4A SINE B4 22 37 -255 1 856 1314 232 72 14 chr13 35563253 35563599 -84720713 - ORR1D2 LTR MaLR -4 366 1 1 856 852 261 43 69 chr13 35563599 35563850 -84720462 + B4A SINE B4 38 290 -2 1 856 348 313 20 0 chr13 35564059 35564158 -84720154 + PB1 SINE Alu 25 125 -2 1 856 340 274 61 6 chr13 35564221 35564373 -84719939 + MER2 DNA MER2_type 139 303 -42 1 856 637 271 7 0 chr13 35564390 35564534 -84719778 - B4A SINE B4 -108 184 40 1 856 917 29 42 28 chr13 35564755 35564898 -84719414 + (TTCCC)n Simple_repeat Simple_repeat 2 146 0 1 856 518 55 0 27 chr13 35564919 35564994 -84719318 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 1 856 212 365 0 16 chr13 35565021 35565085 -84719227 - ID4 SINE ID -1 82 20 1 856 289 218 91 11 chr13 35565109 35565197 -84719115 + L1MC4 LINE L1 7427 7521 -361 1 856 2773 213 72 7 chr13 35565555 35566264 -84718048 - RCHARR1 DNA MER1_type -17 957 203 1 856 528 321 49 0 chr13 35566378 35566540 -84717772 - RCHARR1 DNA MER1_type -799 175 6 1 856 444 84 36 0 chr13 35567882 35567965 -84716347 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 1 856 527 245 76 44 chr13 35567965 35568123 -84716189 - MER2 DNA MER2_type -159 186 24 1 856 4085 86 2 4 chr13 35568428 35568974 -84715338 + L1_Mus4 LINE L1 6089 6633 -3 1 856 1492 244 67 0 chr13 35569003 35569364 -84714948 - MTD LTR MaLR -34 385 1 1 856 937 270 31 13 chr13 35569746 35569971 -84714341 - MTEa LTR MaLR -149 230 2 1 856 493 241 110 0 chr13 35570584 35570729 -84713583 - MLT2D LTR ERVL -43 371 211 1 856 392 274 87 20 chr13 35570728 35570877 -84713435 + B3A SINE B2 24 182 -16 1 856 247 365 27 0 chr13 35572308 35572382 -84711930 + ID4_ SINE ID 5 80 -3 1 856 756 236 128 9 chr13 35572378 35572605 -84711707 + MER2 DNA MER2_type 76 329 -16 1 856 437 240 47 19 chr13 35573240 35573346 -84710966 + RSINE1 SINE B4 3 111 -54 1 856 1966 115 131 57 chr13 35574773 35575215 -84709097 + IAPLTR2_Mm LTR ERVK 1 475 0 1 856 200 250 0 0 chr13 35575400 35575444 -84708868 + MIRb SINE MIR 191 234 -34 1 856 5933 98 37 18 chr13 35575596 35576498 -84707814 - Lx3_Mus LINE L1 -1 7008 6090 1 856 234 214 14 41 chr13 35577521 35577594 -84706718 - MTEb LTR MaLR -31 348 278 1 856 251 287 122 47 chr13 35578134 35578306 -84706006 + MIRb SINE MIR 63 247 -21 1 856 265 261 25 64 chr13 35578352 35578441 -84705871 + MIR SINE MIR 143 228 -40 1 856 284 319 70 7 chr13 35578659 35578801 -84705511 - MER58A DNA MER1_type 0 224 74 1 856 4002 78 2 8 chr13 35580140 35580672 -84703640 + L1Md_F2 LINE L1 6054 6582 0 1 856 280 288 0 0 chr13 35580840 35580906 -84703406 - PB1D10 SINE Alu -51 66 1 1 856 3401 281 78 48 chr13 35581207 35582372 -84701940 - Lx8 LINE L1 -2 7471 6272 1 856 881 239 140 23 chr13 35582407 35582699 -84701613 - L1MB3 LINE L1 -77 6106 5785 1 856 372 43 0 0 chr13 35582699 35582745 -84701567 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 856 881 239 140 23 chr13 35582745 35582795 -84701517 - L1MB3 LINE L1 -399 5784 5725 1 856 419 348 42 31 chr13 35582805 35583066 -84701246 + Lx8 LINE L1 7048 7311 -162 1 856 479 247 68 2 chr13 35583149 35583233 -84701079 - L1MB3 LINE L1 -443 5737 5648 1 856 315 0 0 0 chr13 35583233 35583268 -84701044 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 856 479 249 66 8 chr13 35583268 35583347 -84700965 - L1MB3 LINE L1 -533 5647 5573 1 856 187 270 144 11 chr13 35583476 35583566 -84700746 - MIR3 SINE MIR -25 183 82 1 856 550 207 11 0 chr13 35583756 35583930 -84700382 + (CA)n Simple_repeat Simple_repeat 1 176 0 1 856 339 219 0 0 chr13 35583946 35584083 -84700229 + (CA)n Simple_repeat Simple_repeat 1 137 0 1 856 5753 46 7 12 chr13 35584367 35585179 -84699133 + RLTR13C2 LTR ERVK 1 983 0 1 856 523 265 116 33 chr13 35585571 35585813 -84698499 + Lx8 LINE L1 7211 7472 -1 1 856 1568 261 32 22 chr13 35585821 35586229 -84698083 - Lx8 LINE L1 -847 6626 6215 1 856 200 276 202 25 chr13 35586349 35586468 -84697844 - MER5B DNA MER1_type -20 158 19 1 856 2684 67 9 9 chr13 35586673 35587018 -84697294 - IAPLTR4 LTR ERVK 0 345 1 1 856 6433 195 7 7 chr13 35587018 35588173 -84696139 - IAPLTR3-int LTR ERVK -20 6801 5747 1 856 491 265 6 47 chr13 35588329 35588499 -84695813 - IAPLTR3-int LTR ERVK -914 5628 5466 1 856 1964 200 21 19 chr13 35588668 35589229 -84695083 - MMERVK10C-int LTR ERVK -1076 5745 5182 1 856 347 293 109 6 chr13 35589266 35589441 -84694871 - MLT1C LTR MaLR -273 194 2 1 856 259 284 48 24 chr13 35589896 35589979 -84694333 + MER81 DNA AcHobo 11 95 -19 1 856 362 290 78 36 chr13 35590575 35590768 -84693544 - Charlie4a DNA MER1_type 0 508 308 1 856 207 0 0 0 chr13 35591222 35591245 -84693067 + (TTTA)n Simple_repeat Simple_repeat 4 26 0 1 856 545 232 145 7 chr13 35591246 35591398 -84692914 - B3 SINE B2 -11 205 33 1 856 407 282 104 6 chr13 35591558 35591740 -84692572 + MLT1C LTR MaLR 1 200 -267 1 856 294 279 23 11 chr13 35591825 35591912 -84692400 + MLT1C LTR MaLR 380 467 0 1 856 771 246 7 19 chr13 35592310 35592515 -84691797 + B3 SINE B2 2 197 -1 1 856 282 235 70 12 chr13 35593183 35593269 -84691043 + MER63D DNA AcHobo 13 103 -958 1 856 344 22 22 0 chr13 35594599 35594644 -84689668 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 856 668 201 35 43 chr13 35595968 35596177 -84688135 + L1MB3 LINE L1 5860 6061 -239 1 856 645 228 0 0 chr13 35596281 35596404 -84687908 + RSINE1 SINE B4 3 125 -40 1 856 495 278 158 22 chr13 35596656 35596840 -84687472 + B3A SINE B2 1 209 -7 1 856 234 222 19 0 chr13 35598075 35598129 -84686183 + L1M5 LINE L1 5825 5879 -565 1 856 252 0 0 0 chr13 35599185 35599213 -84685099 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 856 1937 90 15 66 chr13 35599849 35600182 -84684130 - ORR1A4 LTR MaLR -11 318 3 1 856 428 296 160 11 chr13 35600316 35600579 -84683733 + LTR33A LTR ERVL 211 512 -8 1 856 477 110 0 0 chr13 35600886 35600968 -84683344 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 856 849 264 57 80 chr13 35601987 35602222 -84682090 - MLT1C LTR MaLR -28 362 151 1 856 3572 20 0 0 chr13 35602222 35602618 -84681694 + MTA_Mm LTR MaLR 1 396 0 1 856 849 244 58 29 chr13 35602618 35602763 -84681549 - MLT1C LTR MaLR -310 157 15 1 856 597 349 58 49 chr13 35602774 35603100 -84681212 - MLT1C-int LTR MaLR -8 1363 1034 1 856 3453 28 5 0 chr13 35603100 35603494 -84680818 - MTA_Mm LTR MaLR 0 396 1 1 856 597 349 58 49 chr13 35603494 35603511 -84680801 - MLT1C-int LTR MaLR -338 1033 1017 1 856 481 284 0 8 chr13 35603535 35603652 -84680660 - PB1D10 SINE Alu -1 116 1 1 856 228 336 157 17 chr13 35603871 35604216 -84680096 + L4 LINE RTE 275 667 -1362 1 856 354 253 12 0 chr13 35604217 35604300 -84680012 + L1MA9 LINE L1 5834 5917 -395 1 856 435 264 0 9 chr13 35604427 35604538 -84679774 - Tigger1 DNA MER2_type -5 2413 2304 1 856 431 301 44 0 chr13 35604547 35604683 -84679629 + B1_Mm SINE Alu 6 147 0 1 856 528 158 0 0 chr13 35604684 35604779 -84679533 + (TA)n Simple_repeat Simple_repeat 2 96 0 1 856 3760 228 57 49 chr13 35604860 35605646 -84678666 - Tigger1 DNA MER2_type -147 2271 1466 1 856 1160 190 15 5 chr13 35605646 35605852 -84678460 - B3 SINE B2 -6 210 3 1 856 3760 228 57 49 chr13 35605852 35606234 -84678078 - Tigger1 DNA MER2_type -953 1465 1093 1 856 578 212 0 0 chr13 35606611 35606729 -84677583 - Tigger1 DNA MER2_type -1323 1095 978 1 856 232 319 42 0 chr13 35606820 35606892 -84677420 + MTE2a LTR MaLR 75 149 -230 1 856 290 91 0 29 chr13 35606970 35607038 -84677274 + MT2A LTR ERVL 466 531 -2 1 856 1251 287 94 65 chr13 35607038 35607746 -84676566 - Tigger1 DNA MER2_type -1463 955 227 1 856 21 0 0 0 chr13 35607895 35607916 -84676396 + AT_rich Low_complexity Low_complexity 1 21 0 1 856 341 275 23 81 chr13 35607995 35608169 -84676143 + RSINE1 SINE B4 2 165 0 1 856 277 301 96 11 chr13 35608195 35608289 -84676023 + ID_B1 SINE B4 100 201 -23 1 856 24 32 0 0 chr13 35608301 35608332 -84675980 + AT_rich Low_complexity Low_complexity 1 31 0 1 856 432 288 17 35 chr13 35609372 35609487 -84674825 + B3A SINE B2 50 162 -36 1 856 420 20 0 0 chr13 35609489 35609538 -84674774 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 856 472 248 191 12 chr13 35610091 35610332 -84673980 + L1MB2 LINE L1 5769 6052 -119 1 856 1103 276 66 66 chr13 35610617 35611232 -84673080 - Lx7 LINE L1 -289 6011 5339 1 856 510 152 143 0 chr13 35611233 35611338 -84672974 + MTC LTR MaLR 1 120 -301 1 856 1037 172 172 0 chr13 35611368 35611595 -84672717 - RMER1B Other Other -17 1049 784 1 856 1685 176 23 3 chr13 35611604 35611907 -84672405 + MTC LTR MaLR 106 415 -6 1 856 207 0 0 0 chr13 35611907 35611930 -84672382 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 856 1468 261 103 24 chr13 35611934 35612519 -84671793 - L1M2 LINE L1 -746 5397 4767 1 856 752 276 19 43 chr13 35613509 35613766 -84670546 + MLT1A0 LTR MaLR 34 284 -81 1 856 231 336 8 48 chr13 35613798 35613923 -84670389 + ID_B1 SINE B4 103 222 -2 1 856 256 300 14 41 chr13 35613932 35614005 -84670307 + ID4 SINE ID 2 72 -11 1 856 261 0 0 0 chr13 35614005 35614034 -84670278 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 856 450 0 0 0 chr13 35614034 35614083 -84670229 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 856 343 213 0 74 chr13 35614087 35614168 -84670144 + MLT1A0 LTR MaLR 300 374 0 1 856 324 0 0 0 chr13 35615582 35615618 -84668694 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1 856 5193 189 45 12 chr13 35615911 35616787 -84667525 + RMER1A Other Other 1 892 -138 1 856 348 24 0 0 chr13 35616787 35616828 -84667484 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 856 5193 189 45 12 chr13 35616828 35616947 -84667365 + RMER1A Other Other 893 1029 -1 1 856 621 238 26 33 chr13 35617299 35617451 -84666861 + RSINE1 SINE B4 3 153 -12 1 856 180 217 0 0 chr13 35617451 35617497 -84666815 + GA-rich Low_complexity Low_complexity 1 46 0 1 856 260 270 39 20 chr13 35618249 35618351 -84665961 - L1MA10 LINE L1 -13 6321 6218 1 856 503 213 280 63 chr13 35618424 35618695 -84665617 - MTEa LTR MaLR -49 330 1 1 856 441 303 52 6 chr13 35618695 35618883 -84665429 - L1ME3 LINE L1 -180 5999 5805 1 856 419 257 9 9 chr13 35618904 35619014 -84665298 - B3A SINE B2 -88 110 1 1 856 216 0 0 0 chr13 35619193 35619217 -84665095 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 856 586 222 93 72 chr13 35619290 35619484 -84664828 + B3A SINE B2 1 198 0 2 856 276 283 50 0 chr13 35620384 35620483 -84663829 - MamRep434 DNA TcMar -244 182 79 2 856 1518 249 46 0 chr13 35620708 35621057 -84663255 + ORR1D2 LTR MaLR 1 365 -5 2 856 942 199 0 0 chr13 35621311 35621487 -84662825 - ORR1D1 LTR MaLR -2 372 197 2 856 243 0 0 0 chr13 35621488 35621515 -84662797 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 856 1770 169 88 40 chr13 35621515 35621866 -84662446 - Lx5 LINE L1 -3 7047 6680 2 856 753 241 42 28 chr13 35621867 35622080 -84662232 - ORR1D1 LTR MaLR -154 220 5 2 856 426 325 74 33 chr13 35622561 35622952 -84661360 + L1M5 LINE L1 4749 5155 -991 2 856 269 352 39 39 chr13 35623147 35623277 -84661035 + ID_B1 SINE B4 88 217 -7 2 856 1014 254 41 4 chr13 35623416 35623661 -84660651 + RMER1A Other Other 135 388 -642 2 856 4118 173 36 17 chr13 35623669 35624300 -84660012 + RMER1A Other Other 264 915 -115 2 856 360 0 0 0 chr13 35624300 35624340 -84659972 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 856 4118 173 36 17 chr13 35624340 35624459 -84659853 + RMER1A Other Other 916 1028 -2 2 856 208 296 14 14 chr13 35624571 35624643 -84659669 - L2a LINE L2 -14 3412 3341 2 856 2453 279 58 125 chr13 35624859 35625740 -84658572 + Lx8 LINE L1 4402 5301 -2395 2 856 408 287 33 5 chr13 35625740 35625911 -84658401 + B3A SINE B2 1 183 -12 2 856 2453 279 58 125 chr13 35625911 35626764 -84657548 + Lx8 LINE L1 5302 6175 -1521 2 856 243 61 0 0 chr13 35626764 35626797 -84657515 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 856 2866 282 39 72 chr13 35626797 35627867 -84656445 + Lx8 LINE L1 6176 7330 -143 2 856 26 50 0 0 chr13 35627947 35627987 -84656325 + AT_rich Low_complexity Low_complexity 1 40 0 2 856 418 227 0 11 chr13 35627995 35628084 -84656228 + PB1D10 SINE Alu 28 115 -2 2 856 566 241 225 25 chr13 35628301 35628501 -84655811 + Lx6 LINE L1 7195 7434 -26 2 856 660 306 84 77 chr13 35628620 35629180 -84655132 - MER63C DNA AcHobo -6 924 361 2 856 306 164 14 56 chr13 35629253 35629324 -84654988 + MER58C DNA MER1_type 142 209 -6 2 856 487 289 69 5 chr13 35629434 35629636 -84654676 - MER63C DNA AcHobo -688 242 28 2 856 226 245 92 158 chr13 35631094 35631278 -84653034 - MLT1B LTR MaLR -12 583 412 2 856 1146 158 113 0 chr13 35631830 35632033 -84652279 + URR1A DNA MER1_type 1 226 0 2 856 303 197 0 43 chr13 35632539 35632608 -84651704 + ID_B1 SINE B4 157 222 -2 2 856 468 0 0 0 chr13 35632633 35632685 -84651627 + (TAG)n Simple_repeat Simple_repeat 3 54 0 2 856 186 344 24 39 chr13 35632773 35632900 -84651412 + MIRb SINE MIR 135 259 -9 2 856 464 305 71 0 chr13 35633385 35633526 -84650786 + RSINE1 SINE B4 11 161 -4 2 856 423 0 0 0 chr13 35633528 35633575 -84650737 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 856 916 325 48 23 chr13 35633690 35634168 -84650144 - MLT1F1 LTR MaLR -39 530 41 2 856 598 296 92 0 chr13 35634307 35634503 -84649809 - MLT1B LTR MaLR -8 382 169 2 856 749 204 0 11 chr13 35634549 35634727 -84649585 + CT-rich Low_complexity Low_complexity 1 176 0 2 856 408 262 158 47 chr13 35634998 35635339 -84648973 + Lx9 LINE L1 5769 6147 -1497 2 856 729 178 0 30 chr13 35635372 35635505 -84648807 + B3 SINE B2 2 130 -86 2 856 30 0 0 0 chr13 35635517 35635547 -84648765 + AT_rich Low_complexity Low_complexity 1 30 0 2 856 3427 30 5 0 chr13 35635568 35635962 -84648350 + MTA_Mm LTR MaLR 1 396 0 2 856 1095 308 43 97 chr13 35635976 35636608 -84647704 + Lx9 LINE L1 6248 6845 -799 2 856 477 260 73 0 chr13 35636654 35636777 -84647535 - B1_Mur1 SINE Alu -17 132 1 2 856 21 0 0 0 chr13 35636963 35636984 -84647328 + AT_rich Low_complexity Low_complexity 1 21 0 2 856 361 301 67 40 chr13 35637044 35637269 -84647043 - L1M5 LINE L1 -658 5582 5352 2 856 575 124 37 41 chr13 35637379 35637648 -84646664 + (TG)n Simple_repeat Simple_repeat 1 267 0 2 856 539 101 49 30 chr13 35637704 35637868 -84646444 + (TG)n Simple_repeat Simple_repeat 1 167 0 2 856 380 248 0 52 chr13 35639060 35639175 -84645137 - MER20 DNA MER1_type -65 154 46 2 856 267 103 0 0 chr13 35639973 35640012 -84644300 + (TTTC)n Simple_repeat Simple_repeat 1 39 0 2 856 694 223 153 15 chr13 35640017 35640213 -84644099 - ID_B1 SINE B4 -1 223 1 2 856 636 190 0 0 chr13 35640868 35640968 -84643344 + Lx8 LINE L1 6575 6674 -799 2 856 1687 314 100 16 chr13 35640968 35641646 -84642666 + Lx8 LINE L1 6532 7256 -217 2 856 1771 184 52 25 chr13 35641646 35642014 -84642298 + ORR1C1 LTR MaLR 1 378 0 2 856 1687 314 100 16 chr13 35642014 35642202 -84642110 + Lx8 LINE L1 7257 7471 -2 2 856 276 215 30 15 chr13 35642273 35642335 -84641977 + B4A SINE B4 163 225 -67 2 856 548 222 0 73 chr13 35642335 35642471 -84641841 + RSINE1 SINE B4 2 127 -38 2 856 775 105 15 0 chr13 35642482 35642615 -84641697 + (TAGA)n Simple_repeat Simple_repeat 4 138 0 2 856 461 313 27 0 chr13 35642734 35642884 -84641428 + Lx8 LINE L1 6777 6930 -543 2 856 2670 283 94 24 chr13 35642874 35643808 -84640504 - Lx8 LINE L1 -394 7079 6080 2 856 279 322 46 20 chr13 35644061 35644213 -84640099 - Lx9 LINE L1 -1649 5995 5840 2 856 5479 267 107 27 chr13 35644211 35645040 -84639272 - Lx8 LINE L1 -127 5753 4864 2 856 2294 73 159 23 chr13 35645040 35645391 -84638921 + MTB LTR MaLR 1 399 -1 2 856 5479 267 107 27 chr13 35645391 35646945 -84637367 - Lx8 LINE L1 -1017 4863 3178 2 856 7032 79 71 5 chr13 35646939 35648023 -84636289 - L1_Mus3 LINE L1 -1 6637 5471 2 856 30 0 0 0 chr13 35648058 35648088 -84636224 + AT_rich Low_complexity Low_complexity 1 30 0 2 856 6181 176 53 18 chr13 35648115 35648744 -84635568 - Lx4B LINE L1 -4 6996 6326 2 856 3021 57 20 15 chr13 35648744 35649139 -84635173 - MTB LTR MaLR -3 397 1 2 856 6181 170 45 19 chr13 35649139 35650578 -84633734 - Lx4B LINE L1 -733 6325 5095 2 856 345 294 154 33 chr13 35650618 35650949 -84633363 - L1M4 LINE L1 -1821 4325 3955 2 856 255 286 14 14 chr13 35650975 35651046 -84633266 - PB1D10 SINE Alu -40 77 7 2 856 790 131 52 7 chr13 35651085 35651239 -84633073 - Lx2A1 LINE L1 -3 7005 6845 2 13 15118 93 27 19 chr13 35651280 35654275 -84630037 - L1_Mus3 LINE L1 0 6638 3597 2 857 518 45 45 0 chr13 35654275 35654342 -84629970 + MusHAL1 LINE L1 2302 2371 -341 2 857 294 283 213 39 chr13 35654355 35654371 -84629941 - L1M4 LINE L1 -2259 3887 3872 2 857 2733 54 3 36 chr13 35654371 35654734 -84629578 - L1Md_F2 LINE L1 0 6582 6232 2 857 294 283 213 39 chr13 35654734 35655286 -84629026 - L1M4 LINE L1 -2275 3871 3222 2 857 4561 8 0 0 chr13 35655336 35655829 -84628483 + MT2_Mm LTR ERVL 1 493 0 2 857 308 255 53 0 chr13 35655958 35656052 -84628260 + PB1D7 SINE Alu 12 110 -10 2 857 315 0 0 0 chr13 35656531 35656566 -84627746 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 2 857 701 199 40 54 chr13 35656567 35656716 -84627596 - B1_Mus2 SINE Alu 0 147 1 2 857 2953 128 30 23 chr13 35656977 35657449 -84626863 - MT2C_Mm LTR ERVL 0 475 1 2 857 232 296 48 0 chr13 35657474 35657544 -84626768 - MIRc SINE MIR -153 115 43 2 857 196 196 129 2 chr13 35657673 35657725 -84626587 + MIRb SINE MIR 40 99 -169 2 857 2754 181 31 21 chr13 35657867 35657949 -84626363 + Lx7 LINE L1 6583 6668 -1028 2 857 2025 160 31 8 chr13 35657949 35658308 -84626004 + ORR1B2 LTR MaLR 1 367 0 2 857 2754 181 31 21 chr13 35658308 35658744 -84625568 + Lx7 LINE L1 6669 7106 -590 2 857 1846 89 21 0 chr13 35658744 35659024 -84625288 + ORR1A4 LTR MaLR 2 287 -42 2 857 36198 35 1 0 chr13 35659024 35664847 -84619465 + L1Md_T LINE L1 1 5589 -297 2 857 9155 6 0 0 chr13 35664847 35665843 -84618469 + L1Md_T LINE L1 5590 6585 0 2 857 409 71 0 0 chr13 35665851 35665907 -84618405 + ORR1A4 LTR MaLR 274 329 0 2 857 1726 194 151 67 chr13 35665907 35666442 -84617870 + Lx7 LINE L1 7101 7680 -16 2 857 33317 75 2 5 chr13 35666450 35671546 -84612766 + L1Md_F2 LINE L1 411 5589 -297 2 857 8144 51 2 1 chr13 35671546 35672541 -84611771 + L1Md_F2 LINE L1 5590 6585 0 2 857 250 226 57 0 chr13 35672784 35672859 -84611453 + B1F SINE Alu 33 146 -3 2 857 695 132 0 9 chr13 35674044 35674159 -84610153 - MTB_Mm LTR MaLR -2 405 292 2 857 263 265 15 0 chr13 35674477 35674545 -84609767 - MTB_Mm LTR MaLR -106 273 205 2 857 760 229 50 45 chr13 35674567 35674768 -84609544 - B4A SINE B4 -88 204 3 2 857 1028 229 68 81 chr13 35675202 35675610 -84608702 - ORR1D1 LTR MaLR 0 394 1 2 857 186 43 0 0 chr13 35675953 35675976 -84608336 + (T)n Simple_repeat Simple_repeat 1 23 0 2 857 279 0 0 0 chr13 35676448 35676479 -84607833 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 857 189 0 0 0 chr13 35676577 35676598 -84607714 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 857 758 249 64 5 chr13 35676771 35676973 -84607339 + B3 SINE B2 1 214 -2 2 857 378 0 0 0 chr13 35676988 35677030 -84607282 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 2 857 246 264 72 53 chr13 35677567 35677719 -84606593 + L1M5 LINE L1 2213 2367 -3779 2 857 280 227 15 29 chr13 35677922 35677990 -84606322 + ID4 SINE ID 1 67 -16 2 857 3428 47 2 0 chr13 35678004 35678409 -84605903 + MTB_Mm LTR MaLR 2 407 0 2 857 1102 70 35 0 chr13 35678531 35678674 -84605638 + B1_Mus1 SINE Alu 1 148 0 2 857 1527 280 124 35 chr13 35678687 35679491 -84604821 + L1MA6 LINE L1 5297 6172 -128 2 857 2318 307 77 73 chr13 35679491 35681305 -84603007 + L1_Mur3 LINE L1 4029 5794 -86 2 857 590 259 31 12 chr13 35681306 35681431 -84602881 + RSINE1 SINE B4 3 128 -37 2 857 378 0 0 0 chr13 35681431 35681473 -84602839 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 857 360 0 0 0 chr13 35681473 35681512 -84602800 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 857 590 259 31 12 chr13 35681512 35681545 -84602767 + RSINE1 SINE B4 129 164 -1 2 857 32964 97 18 8 chr13 35681585 35687320 -84596992 + L1_Mus1 LINE L1 380 6172 -395 2 857 524 101 0 0 chr13 35687306 35687385 -84596927 + L1_Mus1 LINE L1 6460 6538 -29 2 857 217 167 48 0 chr13 35687399 35687441 -84596871 + B3A SINE B2 1 44 -154 2 857 23 54 0 0 chr13 35687523 35687560 -84596752 + AT_rich Low_complexity Low_complexity 1 37 0 2 857 880 258 144 25 chr13 35687987 35688349 -84595963 - MTD LTR MaLR -14 405 1 2 857 456 264 182 23 chr13 35688408 35688540 -84595772 + RSINE1 SINE B4 13 165 0 2 857 23 54 0 0 chr13 35688540 35688577 -84595735 + AT_rich Low_complexity Low_complexity 1 37 0 2 857 253 290 87 30 chr13 35688593 35688798 -84595514 + L1M5 LINE L1 2874 3088 -3058 2 857 1067 97 7 0 chr13 35688798 35688943 -84595369 + B1_Mm SINE Alu 2 147 0 2 857 253 290 87 30 chr13 35688943 35688968 -84595344 + L1M5 LINE L1 3089 3117 -3029 2 857 5109 161 25 64 chr13 35689659 35690598 -84593714 - RMER19B LTR ERVK 0 902 1 2 857 7998 45 1 2 chr13 35694020 35694977 -84589335 - L1Md_F2 LINE L1 -13 6569 5614 2 857 726 257 62 34 chr13 35695132 35695309 -84589003 + B3A SINE B2 1 182 -16 2 857 315 282 61 47 chr13 35695923 35696086 -84588226 + MLT1J2 LTR MaLR 3 167 -281 2 857 558 0 0 0 chr13 35696149 35696211 -84588101 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 857 445 236 405 5 chr13 35696563 35696763 -84587549 + B4 SINE B4 1 280 -12 3 857 291 71 0 0 chr13 35696767 35696809 -84587503 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 857 252 0 0 0 chr13 35696809 35696837 -84587475 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 857 676 283 52 13 chr13 35698281 35698510 -84585802 + RMER15 LTR ERVL 336 573 -2 3 857 3370 38 5 0 chr13 35698990 35699384 -84584928 - MTA_Mm LTR MaLR 0 396 1 3 857 210 391 16 8 chr13 35699812 35699941 -84584371 + MIR3 SINE MIR 1 130 -78 3 857 245 89 22 0 chr13 35700460 35700505 -84583807 + (TTTAA)n Simple_repeat Simple_repeat 4 49 0 3 857 234 310 0 0 chr13 35700801 35700859 -84583453 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 857 233 326 31 0 chr13 35701531 35701629 -84582683 + MIRb SINE MIR 89 189 -79 3 857 376 254 71 8 chr13 35701823 35701950 -84582362 + RSINE1 SINE B4 29 163 -2 3 857 292 234 61 41 chr13 35702116 35702174 -84582138 - MIRm SINE MIR -123 153 93 3 857 1919 202 45 7 chr13 35702174 35702578 -84581734 + MTD LTR MaLR 1 419 0 3 857 292 234 61 41 chr13 35702578 35702617 -84581695 - MIRm SINE MIR -184 92 54 3 857 1815 202 18 44 chr13 35703444 35703828 -84580484 - ORR1D1 LTR MaLR 0 374 1 3 857 228 329 133 40 chr13 35704879 35705104 -84579208 - LTR16B2 LTR ERVL -2 460 215 3 857 307 342 42 0 chr13 35705123 35705243 -84579069 - LTR16B2 LTR ERVL -320 142 18 3 857 1338 169 21 254 chr13 35705614 35706098 -84578214 + ORR1D1 LTR MaLR 1 371 -3 3 857 1614 264 74 29 chr13 35706320 35706836 -84577476 + MER44B DNA MER2_type 11 549 -1 3 857 294 98 0 0 chr13 35707990 35708041 -84576271 + (ACTG)n Simple_repeat Simple_repeat 3 53 0 3 857 294 391 25 20 chr13 35708053 35708249 -84576063 - MLT1F1 LTR MaLR -371 198 2 3 857 469 316 33 84 chr13 35709443 35709657 -84574655 + MER20 DNA MER1_type 4 206 -13 3 857 1321 247 85 11 chr13 35709945 35710297 -84574015 + MTEa LTR MaLR 1 378 -1 3 857 380 275 18 18 chr13 35711044 35711155 -84573157 - PB1D10 SINE Alu -1 116 6 3 857 519 60 0 0 chr13 35712068 35712135 -84572177 + (TGG)n Simple_repeat Simple_repeat 1 67 0 3 857 216 377 33 13 chr13 35712536 35712689 -84571623 - L2a LINE L2 -39 3387 3232 3 857 458 268 16 0 chr13 35713205 35713328 -84570984 + ID_B1 SINE B4 99 223 -1 3 857 234 368 8 26 chr13 35713481 35713598 -84570714 - MLT1I LTR MaLR -236 175 61 3 857 10569 132 30 89 chr13 35713837 35714254 -84570058 - L1_Mur2 LINE L1 -872 5005 4576 3 857 1180 13 40 0 chr13 35714254 35714403 -84569909 + B2_Mm1a SINE B2 4 158 -35 3 857 261 0 0 0 chr13 35714403 35714432 -84569880 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 3 857 916 56 159 0 chr13 35714438 35714564 -84569748 + B1_Mm SINE Alu 1 146 -1 3 857 10569 132 30 89 chr13 35714564 35715654 -84568658 - L1_Mur2 LINE L1 -1302 4575 3479 3 857 210 37 0 0 chr13 35715654 35715681 -84568631 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 857 385 19 0 36 chr13 35715681 35715736 -84568576 + (TTGG)n Simple_repeat Simple_repeat 2 55 0 3 857 216 0 0 0 chr13 35715738 35715762 -84568550 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 3 857 10569 132 30 89 chr13 35715762 35716002 -84568310 - L1_Mur2 LINE L1 -2399 3478 3237 3 857 810 31 0 0 chr13 35716002 35716099 -84568213 + (TC)n Simple_repeat Simple_repeat 2 98 0 3 857 10569 132 30 89 chr13 35716099 35716299 -84568013 - L1_Mur2 LINE L1 -2641 3236 3024 3 857 789 209 89 5 chr13 35716319 35716521 -84567791 + MTE2b LTR MaLR 108 326 -53 3 857 204 278 286 5 chr13 35716666 35716883 -84567429 - L2 LINE L2 -1007 2412 2135 3 857 314 320 120 77 chr13 35717884 35718158 -84566154 + B4A SINE B4 1 286 -6 3 857 2061 242 53 2 chr13 35718539 35718994 -84565318 + Lx5 LINE L1 6570 7047 -3 3 857 238 290 29 0 chr13 35719239 35719308 -84565004 + MTE2b LTR MaLR 287 357 -2 3 857 291 250 74 8 chr13 35719768 35719889 -84564423 + L1M LINE L1 5254 5382 -742 3 857 1596 152 15 4 chr13 35720700 35721019 -84563293 - ORR1A4 LTR MaLR -2 392 46 3 857 389 176 0 62 chr13 35721008 35721105 -84563207 - ORR1A4 LTR MaLR -235 91 1 3 857 3604 221 50 48 chr13 35721115 35721957 -84562355 + Lx6 LINE L1 285 1146 -6582 3 857 724 171 70 14 chr13 35721957 35722099 -84562213 + B1_Mur4 SINE Alu 1 150 0 3 857 3604 173 23 22 chr13 35722099 35722213 -84562099 + Lx6 LINE L1 1129 1232 -6496 3 857 36824 45 3 1 chr13 35722212 35727592 -84556720 + L1Md_F2 LINE L1 233 5585 -298 3 857 8547 51 1 1 chr13 35727593 35728583 -84555729 + L1Md_F2 LINE L1 5587 6576 -6 3 857 21216 151 71 59 chr13 35728622 35731646 -84552666 + Lx6 LINE L1 1236 4271 -1609 3 857 258 32 0 0 chr13 35731646 35731677 -84552635 + (TTA)n Simple_repeat Simple_repeat 2 32 0 3 857 602 100 21 53 chr13 35731681 35731776 -84552536 - B1_Mur4 SINE Alu 0 150 59 3 857 21216 151 71 59 chr13 35731776 35732659 -84551653 + Lx6 LINE L1 4276 5259 -621 3 857 288 0 0 0 chr13 35732659 35732691 -84551621 + (GA)n Simple_repeat Simple_repeat 1 32 0 3 857 21216 153 68 55 chr13 35732691 35733325 -84550987 + Lx6 LINE L1 5260 5933 -1527 3 857 261 277 109 46 chr13 35733712 35733886 -84550426 + L2 LINE L2 2739 2923 -496 3 857 1360 120 130 0 chr13 35734226 35734426 -84549886 - URR1A DNA MER1_type 0 226 1 3 857 354 23 0 0 chr13 35734677 35734720 -84549592 + (TGAG)n Simple_repeat Simple_repeat 4 46 0 3 857 221 53 0 50 chr13 35734727 35734767 -84549545 + (CAGA)n Simple_repeat Simple_repeat 1 38 0 3 857 343 298 49 66 chr13 35734769 35734891 -84549421 + PB1D7 SINE Alu 1 120 0 3 857 1062 150 0 6 chr13 35734974 35735142 -84549170 + ORR1B2 LTR MaLR 201 367 0 3 857 1355 210 99 26 chr13 35735556 35735899 -84548413 - ORR1D1 LTR MaLR -2 372 5 3 857 6198 178 86 12 chr13 35735903 35736269 -84548043 - ORR1D1-int LTR MaLR 0 1370 998 3 857 378 0 0 0 chr13 35736269 35736311 -84548001 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 857 6198 178 86 12 chr13 35736311 35736992 -84547320 - ORR1D1-int LTR MaLR -373 997 247 3 857 7078 91 38 6 chr13 35736992 35737949 -84546363 - Lx3_Mus LINE L1 -1 7008 6022 3 857 6198 178 86 12 chr13 35737949 35738171 -84546141 - ORR1D1-int LTR MaLR -1124 246 8 3 857 1663 185 110 29 chr13 35738174 35738519 -84545793 - ORR1D1 LTR MaLR 0 374 2 3 857 189 74 0 0 chr13 35738573 35738600 -84545712 + (TTG)n Simple_repeat Simple_repeat 2 28 0 3 857 1206 75 7 0 chr13 35738703 35738850 -84545462 + B1_Mus1 SINE Alu 1 148 0 3 857 333 0 0 0 chr13 35738853 35738890 -84545422 + (A)n Simple_repeat Simple_repeat 1 37 0 3 857 968 287 89 54 chr13 35739214 35739564 -84544748 + MTEb LTR MaLR 14 375 -4 3 857 730 262 42 106 chr13 35739580 35739892 -84544420 + B4A SINE B4 1 292 0 3 857 576 226 115 33 chr13 35740176 35740359 -84543953 + MER2 DNA MER2_type 8 205 -140 3 857 715 240 0 0 chr13 35740899 35741028 -84543284 + B1_Mur1 SINE Alu 2 130 -19 3 857 323 212 0 12 chr13 35741032 35741118 -84543194 + GA-rich Low_complexity Low_complexity 6 90 0 3 857 2573 246 61 34 chr13 35742005 35742778 -84541534 + L1MA9 LINE L1 5374 6167 -145 3 857 684 292 55 19 chr13 35742769 35743125 -84541187 + L1M5 LINE L1 3592 3972 -2174 3 857 355 287 19 65 chr13 35743237 35743345 -84540967 + PB1D7 SINE Alu 18 120 0 3 857 372 240 25 51 chr13 35743458 35743537 -84540775 + ID4_ SINE ID 6 82 -1 3 857 321 302 25 42 chr13 35743538 35743742 -84540570 + L1M5 LINE L1 4492 4692 -1454 3 857 210 257 141 14 chr13 35743910 35743981 -84540331 + B4A SINE B4 73 152 -140 3 857 448 242 11 0 chr13 35743936 35744027 -84540285 + PB1 SINE Alu 24 115 -12 3 857 2728 89 11 0 chr13 35744096 35744446 -84539866 + L1_Mus4 LINE L1 6275 6628 -8 3 857 339 322 118 0 chr13 35744756 35744908 -84539404 + L1M5 LINE L1 5418 5587 -653 3 857 402 333 8 0 chr13 35745511 35745643 -84538669 + L1M5 LINE L1 5588 5720 -520 3 857 442 312 35 0 chr13 35745660 35745804 -84538508 + RSINE1 SINE B4 3 151 -14 3 857 265 242 73 10 chr13 35745880 35745976 -84538336 + L1M5 LINE L1 5726 5827 -413 3 857 778 308 89 18 chr13 35746087 35746414 -84537898 + Lx9 LINE L1 7112 7461 -183 3 857 487 157 9 9 chr13 35746451 35746560 -84537752 + GA-rich Low_complexity Low_complexity 2 110 0 3 857 255 198 32 42 chr13 35746965 35747060 -84537252 + (TTATA)n Simple_repeat Simple_repeat 2 95 0 3 857 268 313 0 46 chr13 35747060 35747147 -84537165 + ID4_ SINE ID 1 83 0 3 857 375 274 49 41 chr13 35747237 35747400 -84536912 + B4A SINE B4 112 290 -2 3 857 732 232 67 67 chr13 35747481 35747675 -84536637 + B3A SINE B2 5 198 0 3 857 882 245 52 65 chr13 35748322 35748553 -84535759 + B4 SINE B4 52 279 -13 3 857 486 0 0 0 chr13 35748553 35748607 -84535705 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 857 182 37 37 0 chr13 35748643 35748670 -84535642 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 3 857 1204 254 72 17 chr13 35749024 35749316 -84534996 + MTD LTR MaLR 98 405 -14 3 857 212 292 0 0 chr13 35749329 35749377 -84534935 + ID4 SINE ID 28 75 -8 3 857 398 309 117 15 chr13 35749566 35749832 -84534480 + L1MA6 LINE L1 6008 6300 0 3 857 300 27 0 0 chr13 35750123 35750160 -84534152 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 857 373 264 88 35 chr13 35750418 35750532 -84533780 - PB1D7 SINE Alu 0 120 1 3 857 806 356 49 9 chr13 35750606 35750935 -84533377 + MER2 DNA MER2_type 4 345 0 3 857 551 15 15 0 chr13 35751280 35751348 -84532964 + (TG)n Simple_repeat Simple_repeat 1 69 0 3 857 413 269 42 8 chr13 35751348 35751468 -84532844 - RSINE1 SINE B4 -31 134 11 3 857 428 0 0 19 chr13 35752087 35752140 -84532172 + (TTCTC)n Simple_repeat Simple_repeat 1 52 0 3 857 1024 101 6 22 chr13 35752141 35752323 -84531989 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 3 857 536 305 152 5 chr13 35752323 35752514 -84531798 - B4A SINE B4 -72 220 2 3 857 271 299 30 0 chr13 35752535 35752602 -84531710 + ID4 SINE ID 2 70 -13 3 857 554 264 0 67 chr13 35752957 35753107 -84531205 + B1_Mur1 SINE Alu 2 141 -8 3 857 995 220 35 10 chr13 35753127 35753329 -84530983 + B3 SINE B2 1 207 -9 3 857 248 403 21 7 chr13 35753652 35753792 -84530520 + L2 LINE L2 2389 2530 -889 3 857 227 147 160 93 chr13 35753865 35753940 -84530372 - Lx8 LINE L1 -10 7463 7384 3 857 1055 63 155 0 chr13 35754003 35754145 -84530167 + U1 snRNA snRNA 1 164 -1 3 857 370 329 29 0 chr13 35754157 35754294 -84530018 - Lx9 LINE L1 -182 7462 7322 3 857 459 226 11 0 chr13 35754958 35755051 -84529261 + RSINE1 SINE B4 4 97 -68 3 857 509 214 68 43 chr13 35755116 35755233 -84529079 + B4A SINE B4 3 122 -170 3 857 387 0 0 0 chr13 35755238 35755281 -84529031 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 857 1041 210 30 5 chr13 35755392 35755593 -84528719 - B3 SINE B2 -10 206 1 4 857 932 129 40 7 chr13 35755643 35755791 -84528521 - B2_Mm2 SINE B2 -41 154 2 4 857 371 169 144 11 chr13 35756283 35756373 -84527939 - B1_Mur4 SINE Alu -8 142 41 4 857 894 252 63 0 chr13 35756799 35757005 -84527307 + ID_B1 SINE B4 3 221 -3 4 857 629 314 17 44 chr13 35757017 35757177 -84527135 + B3A SINE B2 1 157 -59 4 857 223 28 56 0 chr13 35757177 35757213 -84527099 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 857 587 314 17 44 chr13 35757213 35757232 -84527080 + B3 SINE B2 158 175 -41 4 857 233 290 73 44 chr13 35757472 35757609 -84526703 - MIR3 SINE MIR -25 183 43 4 857 388 285 22 82 chr13 35757609 35757743 -84526569 + RSINE1 SINE B4 1 126 -39 4 857 202 293 147 0 chr13 35758693 35758768 -84525544 + MIR SINE MIR 61 146 -62 4 857 368 288 128 21 chr13 35759820 35760024 -84524288 + MIRb SINE MIR 15 246 -22 4 857 218 304 49 25 chr13 35761159 35761240 -84523072 + L2c LINE L2 3254 3336 -51 4 857 727 249 135 46 chr13 35763114 35763466 -84520846 - MTD LTR MaLR -16 403 1 4 857 234 0 0 0 chr13 35763581 35763607 -84520705 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 857 245 273 122 22 chr13 35763662 35763752 -84520560 - B1F2 SINE Alu -39 110 12 4 857 416 294 33 33 chr13 35763699 35763850 -84520462 - B4A SINE B4 -141 151 1 4 857 211 269 75 0 chr13 35763886 35763953 -84520359 - B4 SINE B4 -201 91 20 4 857 370 273 57 14 chr13 35763972 35764113 -84520199 - B1F1 SINE Alu -2 147 1 4 857 224 143 0 51 chr13 35764229 35764288 -84520024 + T-rich Low_complexity Low_complexity 1 56 0 4 857 234 0 0 0 chr13 35764289 35764315 -84519997 + (T)n Simple_repeat Simple_repeat 1 26 0 4 857 658 167 125 0 chr13 35764343 35764463 -84519849 - B1_Mur4 SINE Alu -9 141 7 4 857 1153 279 51 27 chr13 35764753 35765085 -84519227 - MTE2b LTR MaLR -2 377 38 4 857 251 205 35 103 chr13 35765071 35765100 -84519212 - B1F1 SINE Alu -63 86 6 4 857 260 193 17 17 chr13 35765100 35765158 -84519154 - ID_B1 SINE B4 -80 144 87 4 857 261 259 164 11 chr13 35765261 35765314 -84518998 + ID_B1 SINE B4 29 159 -133 4 857 330 218 63 13 chr13 35765314 35765393 -84518919 + PB1D9 SINE Alu 13 95 -25 4 857 261 259 164 11 chr13 35765393 35765408 -84518904 + ID_B1 SINE B4 160 201 -91 4 857 380 320 26 13 chr13 35766476 35766628 -84517684 - LTR33 LTR ERVL -6 509 356 4 857 257 247 62 115 chr13 35767040 35767136 -84517176 + MTE2a LTR MaLR 279 369 -10 4 857 238 284 125 13 chr13 35767516 35767624 -84516688 + MIRm SINE MIR 83 199 -63 4 857 1286 159 52 24 chr13 35767682 35767895 -84516417 - URR1A DNA MER1_type -3 223 5 4 857 225 179 29 15 chr13 35768705 35768773 -84515539 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 857 2094 134 5 85 chr13 35768783 35769158 -84515154 - ORR1B1 LTR MaLR -10 384 40 4 857 326 162 29 0 chr13 35769240 35769308 -84515004 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 4 857 810 267 126 15 chr13 35769630 35769900 -84514412 - RMER15 LTR ERVL 0 575 276 4 857 3236 28 2 116 chr13 35771757 35772195 -84512117 - RLTR10 LTR ERVK -2 388 1 4 857 2822 152 21 17 chr13 35772269 35772739 -84511573 - RMER13A LTR ERVK -388 472 1 4 857 951 235 51 6 chr13 35772756 35772954 -84511358 - B3 SINE B2 -3 213 6 4 857 700 282 22 45 chr13 35773680 35773903 -84510409 + ID_B1 SINE B4 5 222 -2 4 857 385 341 7 0 chr13 35774537 35774672 -84509640 - L3 LINE CR1 -554 3935 3800 4 857 281 333 98 39 chr13 35776876 35777029 -84507283 - MER47B DNA MER2_type -168 250 89 4 857 367 236 91 57 chr13 35777143 35777318 -84506994 - Charlie4a DNA MER1_type -20 488 308 4 857 26 30 0 0 chr13 35777362 35777395 -84506917 + AT_rich Low_complexity Low_complexity 1 33 0 4 857 208 267 0 0 chr13 35777453 35777498 -84506814 + (TATATG)n Simple_repeat Simple_repeat 3 47 0 4 857 533 238 198 16 chr13 35777558 35777750 -84506562 - L1MB1 LINE L1 -5 6163 5937 4 857 693 267 38 57 chr13 35777803 35778093 -84506219 - Charlie4 DNA MER1_type -187 321 17 4 857 435 16 47 0 chr13 35778569 35778633 -84505679 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 857 222 159 0 43 chr13 35778639 35778685 -84505627 - B1F SINE Alu -27 122 79 4 857 262 303 62 27 chr13 35778783 35778895 -84505417 + PB1D10 SINE Alu 2 117 0 4 857 1148 75 0 0 chr13 35778959 35779118 -84505194 + B2_Mm1a SINE B2 1 159 -34 4 857 243 0 0 0 chr13 35779119 35779146 -84505166 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 4 857 4362 54 0 7 chr13 35779218 35779759 -84504553 + L1Md_F3 LINE L1 5050 5586 -297 4 857 8698 22 1 0 chr13 35779759 35780742 -84503570 + L1Md_F3 LINE L1 5587 6570 -14 4 857 330 199 261 0 chr13 35781121 35781255 -84503057 + B3 SINE B2 47 215 -1 4 857 285 250 0 0 chr13 35781469 35781529 -84502783 + MER20 DNA MER1_type 1 60 -159 4 857 224 271 0 0 chr13 35781638 35781686 -84502626 + ID4 SINE ID 2 49 -34 4 857 475 219 78 0 chr13 35781670 35781832 -84502480 + MTD LTR MaLR 18 209 -212 4 857 729 133 0 45 chr13 35781832 35781966 -84502346 + B1_Mur4 SINE Alu 1 128 -22 4 857 324 0 0 0 chr13 35782026 35782062 -84502250 + (A)n Simple_repeat Simple_repeat 1 36 0 4 857 340 219 188 70 chr13 35782160 35782288 -84502024 - B1_Mur2 SINE Alu -2 147 5 4 857 468 301 0 0 chr13 35782326 35782429 -84501883 - RSINE1 SINE B4 -17 148 46 4 107 318 329 134 46 chr13 35782507 35782835 -84501477 - MLT1J LTR MaLR -1 511 155 4 858 756 230 176 20 chr13 35782918 35783162 -84501150 + B4A SINE B4 11 292 0 4 858 559 272 140 22 chr13 35783199 35783421 -84500891 - MER2 DNA MER2_type -94 251 4 4 858 1143 81 0 0 chr13 35783557 35783705 -84500607 + B1_Mus1 SINE Alu 1 148 0 4 858 3333 60 0 2 chr13 35783819 35784233 -84500079 + L1_Mus1 LINE L1 6155 6567 0 4 858 977 140 0 14 chr13 35784500 35784645 -84499667 - B1_Mus1 SINE Alu -1 147 5 4 858 9168 74 6 1 chr13 35784818 35786032 -84498280 + L1Md_F2 LINE L1 2726 3945 -1938 4 858 5671 60 0 0 chr13 35786027 35786724 -84497588 + L1Md_F2 LINE L1 4890 5586 -297 4 858 8031 59 3 6 chr13 35786724 35787721 -84496591 + L1Md_F2 LINE L1 5587 6580 -2 4 858 402 252 84 49 chr13 35787764 35787906 -84496406 + B1_Mus2 SINE Alu 1 147 0 4 858 605 174 0 65 chr13 35787918 35788041 -84496271 + B3 SINE B2 5 119 -97 4 858 278 300 75 0 chr13 35788047 35788127 -84496185 - MIR SINE MIR -79 129 44 4 858 386 308 191 32 chr13 35789033 35789159 -84495153 + ID_B1 SINE B4 5 154 -70 4 858 1149 95 0 0 chr13 35789159 35789307 -84495005 + B1_Mus1 SINE Alu 1 148 0 4 858 386 308 191 32 chr13 35789307 35789368 -84494944 + ID_B1 SINE B4 155 222 -2 4 858 542 335 12 23 chr13 35789387 35789558 -84494754 - ID_B1 SINE B4 -55 169 1 4 858 195 114 0 0 chr13 35789624 35789659 -84494653 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 858 459 181 19 41 chr13 35789662 35789779 -84494533 - PB1D9 SINE Alu 0 120 10 4 858 1066 202 10 10 chr13 35790606 35790811 -84493501 - B3 SINE B2 -10 206 2 4 858 264 231 15 15 chr13 35791127 35791193 -84493119 + B3A SINE B2 68 133 -65 4 858 544 272 2 0 chr13 35791175 35791311 -84493001 + B1_Mur1 SINE Alu 7 144 -5 4 858 445 132 18 36 chr13 35791313 35791367 -84492945 + polypurine Low_complexity Low_complexity 2 56 0 4 858 1008 156 0 0 chr13 35791367 35791547 -84492765 + GA-rich Low_complexity Low_complexity 1 180 0 4 858 445 132 18 36 chr13 35791547 35791583 -84492729 + polypurine Low_complexity Low_complexity 57 91 0 4 858 1122 56 0 43 chr13 35791583 35791769 -84492543 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 4 858 445 132 18 36 chr13 35791769 35791787 -84492525 + polypurine Low_complexity Low_complexity 92 109 0 4 858 286 264 28 0 chr13 35792262 35792368 -84491944 + (CAGA)n Simple_repeat Simple_repeat 2 110 0 4 858 465 50 0 0 chr13 35792471 35792531 -84491781 + (TGGA)n Simple_repeat Simple_repeat 3 62 0 4 858 1030 216 15 0 chr13 35793232 35793431 -84490881 + B3 SINE B2 2 203 -13 4 858 369 0 0 0 chr13 35793444 35793485 -84490827 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 858 724 157 7 15 chr13 35793508 35793644 -84490668 + B1_Mm SINE Alu 12 146 -1 4 858 304 257 182 7 chr13 35793727 35793864 -84490448 + MER5A1 DNA MER1_type 3 163 -3 4 858 243 0 0 0 chr13 35794240 35794267 -84490045 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 858 304 268 79 31 chr13 35795646 35795773 -84488539 - ORR1E LTR MaLR -224 135 3 4 858 328 362 58 58 chr13 35795844 35796087 -84488225 + L4 LINE RTE 1300 1542 -487 4 858 1342 231 121 3 chr13 35796626 35796965 -84487347 - MTEa LTR MaLR 0 379 1 4 858 364 302 10 40 chr13 35796965 35797065 -84487247 + PB1D10 SINE Alu 12 108 -9 4 858 280 262 6 6 chr13 35797065 35797234 -84487078 + (TA)n Simple_repeat Simple_repeat 2 170 0 4 858 270 290 53 61 chr13 35797320 35797452 -84486860 + B1F1 SINE Alu 1 131 -18 4 858 771 62 9 0 chr13 35797476 35797589 -84486723 + L1_Mus2 LINE L1 6453 6566 0 4 858 837 20 0 0 chr13 35797854 35797953 -84486359 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 4 858 705 98 24 16 chr13 35798082 35798207 -84486105 + (TATATG)n Simple_repeat Simple_repeat 1 126 0 4 858 1627 222 26 37 chr13 35798644 35798849 -84485463 - MTD LTR MaLR -14 405 205 4 858 6781 43 1 5 chr13 35798849 35799671 -84484641 - L1Md_F2 LINE L1 0 6582 5764 4 858 1627 222 26 37 chr13 35799671 35799844 -84484468 - MTD LTR MaLR -215 204 31 4 858 371 199 46 32 chr13 35799916 35800050 -84484262 - L1MA4A LINE L1 -390 5901 5773 4 858 391 293 147 62 chr13 35800069 35800294 -84484018 - B4 SINE B4 -10 282 45 5 858 847 301 22 63 chr13 35800303 35800650 -84483662 - L1MA4A LINE L1 -471 5820 5459 4 858 541 242 48 0 chr13 35800658 35800782 -84483530 - B1_Mur1 SINE Alu -5 144 15 5 858 261 204 0 0 chr13 35800806 35800855 -84483457 - L1_Mur2 LINE L1 -462 5415 5367 5 858 641 274 16 22 chr13 35800907 35801090 -84483222 - B3A SINE B2 -16 182 1 5 858 289 207 17 45 chr13 35801090 35801199 -84483113 - L1MA4A LINE L1 -731 5393 5285 4 858 203 89 67 0 chr13 35801238 35801283 -84483029 + A-rich Low_complexity Low_complexity 6 53 0 5 858 465 300 47 137 chr13 35801290 35801393 -84482919 - L1MA4A LINE L1 -932 5211 5117 4 858 1085 53 0 0 chr13 35801393 35801524 -84482788 + B1_Mus2 SINE Alu 2 132 -15 5 858 465 300 47 137 chr13 35801524 35801779 -84482533 - L1MA4A LINE L1 -1027 5116 4885 4 858 522 202 0 37 chr13 35801790 35801900 -84482412 - B1_Mur3 SINE Alu -6 143 20 5 858 2071 292 76 59 chr13 35801900 35802508 -84481804 - L1MA4A LINE L1 -1287 4856 4226 4 858 943 214 0 112 chr13 35802508 35802740 -84481572 - B3 SINE B2 -10 206 1 5 858 2071 292 76 59 chr13 35802740 35803324 -84480988 - L1MA4A LINE L1 -1918 4225 3643 4 858 1491 204 26 66 chr13 35803461 35803839 -84480473 - ORR1D2 LTR MaLR -2 368 6 5 858 744 279 60 6 chr13 35803840 35804157 -84480155 - L1_Mur3 LINE L1 -2500 3380 3047 5 858 1034 114 24 0 chr13 35804192 35804358 -84479954 - B2_Mm1t SINE B2 -23 170 1 5 858 754 265 86 90 chr13 35804420 35804876 -84479436 - L1_Mur3 LINE L1 -3110 2770 2317 5 858 261 0 0 0 chr13 35804905 35804934 -84479378 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 858 1167 44 0 0 chr13 35804934 35805069 -84479243 - B1_Mus1 SINE Alu -9 139 5 5 858 327 171 0 0 chr13 35805308 35805384 -84478928 + T-rich Low_complexity Low_complexity 1 76 0 5 858 243 0 0 0 chr13 35805767 35805794 -84478518 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 858 549 248 30 8 chr13 35805815 35805949 -84478363 + B1_Mur1 SINE Alu 12 148 -1 5 858 582 252 12 42 chr13 35805975 35806141 -84478171 + RSINE1 SINE B4 5 165 0 5 858 483 323 6 12 chr13 35806156 35806319 -84477993 + RSINE1 SINE B4 1 162 -3 5 858 331 295 45 0 chr13 35806352 35806464 -84477848 + PB1D10 SINE Alu 1 117 0 5 858 862 135 35 0 chr13 35806565 35806706 -84477606 + B1_Mur4 SINE Alu 5 150 0 5 858 396 0 0 0 chr13 35807662 35807706 -84476606 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 858 477 273 30 24 chr13 35807779 35807944 -84476368 - B4A SINE B4 -124 168 3 5 858 398 169 0 24 chr13 35808016 35808101 -84476211 + CT-rich Low_complexity Low_complexity 2 84 0 5 858 271 284 23 0 chr13 35808119 35808207 -84476105 - ID_B1 SINE B4 -14 210 121 5 858 506 282 0 0 chr13 35808618 35808728 -84475584 + PB1D10 SINE Alu 1 110 -7 5 858 800 42 244 0 chr13 35809312 35809431 -84474881 + B1_Mus1 SINE Alu 1 148 0 5 858 212 0 0 35 chr13 35809438 35809467 -84474845 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 5 858 1332 238 61 22 chr13 35809519 35809880 -84474432 + MTE2b LTR MaLR 3 377 -2 5 858 24 53 0 0 chr13 35809950 35809988 -84474324 + AT_rich Low_complexity Low_complexity 1 38 0 5 858 409 275 14 71 chr13 35809989 35810130 -84474182 + ID_B1 SINE B4 1 133 -91 5 858 1521 82 127 114 chr13 35812315 35812630 -84471682 - ORR1A2 LTR MaLR -8 319 1 5 858 492 286 0 16 chr13 35813340 35813461 -84470851 + RSINE1 SINE B4 3 121 -44 5 858 312 27 0 0 chr13 35813468 35813505 -84470807 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 858 378 0 0 0 chr13 35813549 35813591 -84470721 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 858 311 259 200 7 chr13 35813612 35813752 -84470560 + L1MEg LINE L1 1357 1523 -4561 5 858 1197 227 134 35 chr13 35813866 35814208 -84470104 - MTE2a LTR MaLR -3 376 1 5 858 382 312 15 88 chr13 35814209 35814346 -84469966 + RSINE1 SINE B4 39 165 0 5 858 26 0 0 0 chr13 35814351 35814377 -84469935 + AT_rich Low_complexity Low_complexity 1 26 0 5 858 1281 88 47 0 chr13 35814471 35814642 -84469670 + B2_Mm1t SINE B2 1 179 -14 5 858 302 146 0 18 chr13 35814727 35814783 -84469529 + B2_Mm2 SINE B2 47 101 -94 5 858 252 0 0 0 chr13 35814807 35814835 -84469477 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 5 858 2245 116 79 0 chr13 35815163 35815541 -84468771 + MTC LTR MaLR 1 408 -13 5 858 371 240 79 10 chr13 35815802 35815903 -84468409 - B1_Mur3 SINE Alu -1 148 41 5 858 378 0 0 0 chr13 35815970 35816012 -84468300 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 858 551 270 14 28 chr13 35816012 35816153 -84468159 - RSINE1 SINE B4 -26 139 1 5 858 1215 61 0 0 chr13 35816302 35816450 -84467862 - B1_Mus1 SINE Alu 0 148 1 5 858 2666 146 166 6 chr13 35816508 35817033 -84467279 + RMER19C LTR ERVK 3 611 0 5 858 237 139 0 0 chr13 35817065 35817108 -84467204 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 5 858 291 28 0 0 chr13 35817134 35817170 -84467142 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 858 544 279 130 0 chr13 35817251 35817412 -84466900 + B3 SINE B2 21 202 -14 5 858 1038 213 45 0 chr13 35817554 35817756 -84466556 + B3 SINE B2 1 211 -5 5 858 79 50 0 0 chr13 35817763 35817884 -84466428 + AT_rich Low_complexity Low_complexity 1 121 0 5 858 590 217 69 42 chr13 35818406 35818550 -84465762 - B1_Mur1 SINE Alu 0 149 2 5 858 363 324 63 7 chr13 35819023 35819269 -84465043 - L1MA8 LINE L1 -271 6029 5771 5 858 333 0 0 0 chr13 35819286 35819323 -84464989 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 858 419 222 20 10 chr13 35819341 35819441 -84464871 - B3A SINE B2 -53 145 45 5 858 376 295 0 0 chr13 35819439 35819534 -84464778 - PB1D7 SINE Alu -24 96 2 5 858 6745 171 59 18 chr13 35819603 35821720 -84462592 - Lx5 LINE L1 0 7050 4826 5 858 7351 152 41 13 chr13 35821712 35822303 -84462009 - Lx5 LINE L1 -3233 2644 2046 5 858 261 0 0 0 chr13 35822303 35822332 -84461980 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 858 7351 162 95 19 chr13 35822332 35823457 -84460855 - Lx5 LINE L1 -3832 2045 888 5 858 225 83 0 0 chr13 35823971 35824007 -84460305 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 5 858 372 270 61 45 chr13 35824007 35824139 -84460173 - B1_Mur1 SINE Alu -13 136 3 5 858 219 355 116 0 chr13 35824140 35824261 -84460051 - B4 SINE B4 -68 224 90 5 858 553 309 17 8 chr13 35824295 35824487 -84459825 + B3A SINE B2 15 205 -11 5 858 1460 252 235 32 chr13 35824750 35825521 -84458791 + L1MC3 LINE L1 6690 7616 -169 5 858 260 310 10 0 chr13 35825604 35825704 -84458608 + L1MC3 LINE L1 7615 7715 -70 5 858 289 265 9 105 chr13 35825716 35825830 -84458482 + MT2B LTR ERVL 154 256 -345 5 858 687 211 1 0 chr13 35825728 35825876 -84458436 + B1_Mur4 SINE Alu 1 150 0 5 858 333 0 0 0 chr13 35826123 35826160 -84458152 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 858 516 289 42 7 chr13 35826176 35826319 -84457993 - RSINE1 SINE B4 -13 152 5 5 858 374 57 19 0 chr13 35826634 35826687 -84457625 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 858 708 226 14 171 chr13 35827152 35827445 -84456867 + B4A SINE B4 1 247 -45 5 858 504 0 0 0 chr13 35827500 35827556 -84456756 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 858 204 125 0 0 chr13 35827614 35827646 -84456666 + (A)n Simple_repeat Simple_repeat 1 32 0 5 858 745 188 0 0 chr13 35827650 35827783 -84456529 - B1_Mur1 SINE Alu -10 139 7 5 858 662 196 0 0 chr13 35827960 35828072 -84456240 + PB1D9 SINE Alu 1 112 -8 5 858 450 0 0 0 chr13 35828090 35828140 -84456172 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 858 211 255 0 0 chr13 35828153 35828200 -84456112 - MER5A DNA MER1_type 0 189 143 5 858 282 316 0 13 chr13 35828216 35828318 -84455994 - ID4_ SINE ID -42 110 12 5 858 255 164 13 141 chr13 35828329 35828407 -84455905 - MER5A DNA MER1_type -113 76 9 5 858 1253 81 40 23 chr13 35828423 35828600 -84455712 + B2_Mm2 SINE B2 2 181 -14 5 858 324 0 0 0 chr13 35828830 35828866 -84455446 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 858 485 140 27 81 chr13 35829277 35829463 -84454849 + GA-rich Low_complexity Low_complexity 3 178 0 5 858 225 119 0 0 chr13 35829564 35829606 -84454706 + (A)n Simple_repeat Simple_repeat 1 42 0 5 858 21 0 0 0 chr13 35832698 35832719 -84451593 + GC_rich Low_complexity Low_complexity 1 21 0 5 858 26 74 0 0 chr13 35833421 35833475 -84450837 + GC_rich Low_complexity Low_complexity 1 54 0 5 858 25 65 0 0 chr13 35833684 35833730 -84450582 + GC_rich Low_complexity Low_complexity 1 46 0 5 858 30 0 0 0 chr13 35833767 35833797 -84450515 + GC_rich Low_complexity Low_complexity 1 30 0 5 858 23 86 0 0 chr13 35833846 35833904 -84450408 + GC_rich Low_complexity Low_complexity 1 58 0 5 858 432 208 148 0 chr13 35835622 35835699 -84448613 + B1_Mus1 SINE Alu 33 119 -29 5 858 249 57 0 0 chr13 35835699 35835734 -84448578 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 858 432 208 148 0 chr13 35835734 35835757 -84448555 + B1_Mus1 SINE Alu 120 147 -1 5 858 242 305 48 12 chr13 35835760 35835774 -84448538 + ID_B1 SINE B4 73 157 -66 5 858 256 205 33 15 chr13 35835774 35835842 -84448470 + PB1D10 SINE Alu 6 76 -41 5 858 297 0 0 0 chr13 35835856 35835889 -84448423 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 5 858 358 291 8 52 chr13 35835889 35836023 -84448289 + RSINE1 SINE B4 3 130 -35 5 858 1184 81 0 0 chr13 35836270 35836418 -84447894 + B1_Mus1 SINE Alu 1 148 0 5 858 748 196 237 0 chr13 35837217 35837390 -84446922 + B3 SINE B2 1 214 -2 5 858 891 288 122 58 chr13 35837452 35838206 -84446106 - L1MA6 LINE L1 -29 6262 5440 5 858 250 323 148 8 chr13 35838206 35838334 -84445978 - RSINE1 SINE B4 -19 146 1 5 858 2616 245 166 59 chr13 35838334 35839194 -84445118 - L1MA6 LINE L1 -852 5439 4462 5 858 372 94 0 0 chr13 35839194 35839247 -84445065 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 858 2616 244 168 58 chr13 35839247 35839977 -84444335 - L1MA6 LINE L1 -1682 4461 3674 5 858 439 259 102 14 chr13 35839977 35840192 -84444120 - L1MA6 LINE L1 -2591 3552 3319 5 858 1606 170 15 11 chr13 35840300 35840573 -84443739 + MTC LTR MaLR 148 421 0 5 858 3234 180 99 24 chr13 35840573 35841319 -84442993 - Lx9 LINE L1 -274 7370 6569 5 858 300 127 36 0 chr13 35841319 35841374 -84442938 + MTD LTR MaLR 359 415 -4 5 858 466 274 166 67 chr13 35841567 35841631 -84442681 - Lx8 LINE L1 -93 7380 7304 6 858 328 40 0 39 chr13 35841631 35841683 -84442629 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 858 466 274 166 67 chr13 35841683 35842009 -84442303 - Lx8 LINE L1 -170 7303 6951 6 858 425 325 95 73 chr13 35842044 35842109 -84442203 - L1MEg LINE L1 -4639 1445 1382 6 858 1096 79 14 0 chr13 35842109 35842248 -84442064 - B1_Mus1 SINE Alu -7 141 1 6 858 425 325 95 73 chr13 35842248 35842594 -84441718 - L1MEg LINE L1 -4703 1381 1025 6 858 253 221 48 72 chr13 35842597 35842680 -84441632 - PB1D10 SINE Alu -6 111 31 6 858 1583 221 182 34 chr13 35842910 35843720 -84440592 + RCHARR1 DNA MER1_type 45 974 0 6 858 636 324 103 14 chr13 35843881 35844172 -84440140 - MTE2b LTR MaLR -60 319 3 6 858 23 0 0 0 chr13 35844369 35844392 -84439920 + GC_rich Low_complexity Low_complexity 1 23 0 6 858 327 49 0 0 chr13 35844789 35844830 -84439482 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 858 688 207 160 11 chr13 35845095 35845276 -84439036 + B3 SINE B2 1 208 -8 6 858 295 315 19 82 chr13 35846478 35846637 -84437675 + ORR1E LTR MaLR 1 149 -210 6 858 180 0 0 0 chr13 35846655 35846675 -84437637 + (CCCCCA)n Simple_repeat Simple_repeat 2 21 0 6 858 525 32 0 0 chr13 35847120 35847183 -84437129 + (TG)n Simple_repeat Simple_repeat 1 63 0 6 858 283 164 48 32 chr13 35847628 35847691 -84436621 - Tigger7 DNA MER2_type -99 2392 2329 6 858 463 276 73 0 chr13 35847823 35847946 -84436366 - Tigger7 DNA MER2_type -2160 331 200 6 858 192 111 0 0 chr13 35848227 35848263 -84436049 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 6 858 840 158 28 21 chr13 35848265 35848407 -84435905 - B1_Mur4 SINE Alu -5 145 3 6 858 295 224 69 0 chr13 35848463 35848521 -84435791 - RSINE1 SINE B4 -17 148 87 6 858 409 260 0 50 chr13 35848543 35848644 -84435668 - RSINE1 SINE B4 -69 96 1 6 858 782 164 111 7 chr13 35849424 35849577 -84434735 + URR1A DNA MER1_type 58 226 0 6 858 234 241 165 0 chr13 35849801 35849880 -84434432 + PB1D10 SINE Alu 21 112 -5 6 858 260 272 122 46 chr13 35850384 35850401 -84433911 + CYRA11_Mm Unknown Y-chromosome 180 206 -411 6 858 569 235 240 6 chr13 35850401 35850572 -84433740 - URR1A DNA MER1_type -2 224 14 6 858 493 268 70 0 chr13 35850911 35851068 -84433244 - Lx7 LINE L1 -384 7312 7145 6 858 352 258 99 39 chr13 35851077 35851211 -84433101 - ID_B1 SINE B4 -96 196 54 6 858 240 319 11 11 chr13 35851447 35851542 -84432770 - PB1D10 SINE Alu 0 117 23 6 858 396 212 12 8 chr13 35851513 35851618 -84432694 - PB1D9 SINE Alu 0 149 44 6 858 624 247 144 0 chr13 35851936 35852082 -84432230 - B3A SINE B2 -31 167 1 6 858 497 300 69 35 chr13 35852121 35852266 -84432046 - RSINE1 SINE B4 0 165 16 6 858 270 309 102 31 chr13 35852779 35852906 -84431406 - B4A SINE B4 0 292 157 6 858 498 256 84 15 chr13 35853163 35853294 -84431018 + B3A SINE B2 2 141 -57 6 858 252 0 0 0 chr13 35853320 35853348 -84430964 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 858 385 322 18 73 chr13 35853349 35853513 -84430799 - B3A SINE B2 -2 214 60 6 858 268 291 61 95 chr13 35854055 35854203 -84430109 - MT2B LTR ERVL -268 333 191 6 858 445 204 38 28 chr13 35854116 35854222 -84430090 - B1_Mur1 SINE Alu -30 119 13 6 858 628 237 0 30 chr13 35854284 35854419 -84429893 - B1_Mur2 SINE Alu -6 143 13 6 858 642 120 20 20 chr13 35854449 35854551 -84429761 + PB1D9 SINE Alu 18 119 -1 6 858 291 250 24 100 chr13 35854584 35854711 -84429601 + B1_Mur3 SINE Alu 1 121 -26 6 858 184 314 162 82 chr13 35854733 35855431 -84428881 - L2 LINE L2 -503 2916 2163 6 858 303 28 0 0 chr13 35855641 35855677 -84428635 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 858 234 0 0 0 chr13 35855677 35855702 -84428610 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 858 301 263 122 43 chr13 35855892 35856031 -84428281 - L1M2 LINE L1 -2185 3958 3809 6 858 927 274 80 83 chr13 35856126 35856159 -84428153 + MTEa LTR MaLR 1 34 -345 6 858 3594 18 0 0 chr13 35856159 35856555 -84427757 + MTA_Mm LTR MaLR 1 396 0 6 858 927 274 80 83 chr13 35856555 35856871 -84427441 + MTEa LTR MaLR 35 349 -30 6 858 198 0 0 0 chr13 35857057 35857079 -84427233 + (TC)n Simple_repeat Simple_repeat 2 23 0 6 858 432 0 0 0 chr13 35857079 35857126 -84427186 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 858 355 283 52 17 chr13 35857202 35857317 -84426995 + PB1 SINE Alu 7 125 -2 6 858 605 247 107 22 chr13 35857555 35857733 -84426579 - B3 SINE B2 -23 193 1 6 858 277 236 291 0 chr13 35858579 35858689 -84425623 - ID_B1 SINE B4 0 224 83 6 858 984 275 115 14 chr13 35858847 35859290 -84425022 - L1MB5 LINE L1 -10 6164 5677 6 858 271 296 67 36 chr13 35859459 35859624 -84424688 - RLTR12A LTR ERVK -42 486 317 6 858 449 290 77 43 chr13 35859640 35859874 -84424438 - RLTR12A LTR ERVK -323 245 4 6 858 417 325 175 58 chr13 35860275 35860462 -84423850 - L1MEf LINE L1 -3556 2763 2524 6 858 835 143 21 28 chr13 35860462 35860606 -84423706 + B1_Mur3 SINE Alu 5 147 -2 6 858 417 325 175 58 chr13 35860606 35860817 -84423495 - L1MEf LINE L1 -3796 2523 2318 6 858 471 263 113 76 chr13 35860830 35861015 -84423297 - B3A SINE B2 -3 195 4 6 858 309 299 190 50 chr13 35861121 35861582 -84422730 - L1MEf LINE L1 -4065 2335 1803 6 858 203 197 32 32 chr13 35862027 35862090 -84422222 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 6 858 498 265 95 73 chr13 35862166 35862398 -84421914 + B4 SINE B4 3 239 -53 6 858 322 288 80 74 chr13 35862385 35862561 -84421751 + B4 SINE B4 95 271 -21 6 858 1167 148 6 6 chr13 35863274 35863457 -84420855 + URR1B DNA MER1_type 1 183 -42 6 858 295 138 52 21 chr13 35864767 35864863 -84419449 + CT-rich Low_complexity Low_complexity 3 101 0 6 858 570 137 132 90 chr13 35864867 35865011 -84419301 - B1_Mur4 SINE Alu 0 150 1 6 858 537 44 0 0 chr13 35865026 35865094 -84419218 + (TCCC)n Simple_repeat Simple_repeat 2 69 0 6 858 1290 93 17 0 chr13 35865101 35865273 -84419039 - B2_Mm2 SINE B2 -19 176 2 6 858 825 191 6 58 chr13 35865289 35865445 -84418867 - B1_Mur1 SINE Alu -1 148 1 6 858 417 20 0 0 chr13 35866116 35866166 -84418146 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 858 227 265 41 0 chr13 35866691 35866740 -84417572 + PB1D10 SINE Alu 46 96 -21 6 858 1047 195 28 9 chr13 35866773 35866990 -84417322 + URR1B DNA MER1_type 1 221 -4 6 858 249 227 118 29 chr13 35867183 35867319 -84416993 + L1MC4 LINE L1 7514 7661 -381 6 858 431 275 117 45 chr13 35867443 35867476 -84416836 - B3A SINE B2 -5 193 165 6 858 276 30 0 0 chr13 35867476 35867509 -84416803 + (TATG)n Simple_repeat Simple_repeat 2 34 0 6 858 431 275 117 45 chr13 35867509 35867654 -84416658 - B3A SINE B2 -34 164 2 6 858 405 0 0 0 chr13 35867757 35867802 -84416510 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 858 225 293 112 22 chr13 35867934 35868112 -84416200 - L1MC4a LINE L1 -1422 6573 6380 6 858 321 298 201 27 chr13 35868348 35868641 -84415671 - L1MC4a LINE L1 -1528 6354 6011 6 858 261 0 0 0 chr13 35868886 35868915 -84415397 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 858 237 350 58 0 chr13 35868925 35869028 -84415284 - L1MC4a LINE L1 -2215 5667 5559 6 858 376 290 19 0 chr13 35869358 35869465 -84414847 - ID_B1 SINE B4 -13 211 103 6 858 1011 308 48 20 chr13 35869911 35870266 -84414046 - MLT1A0 LTR MaLR 0 365 1 6 858 890 258 271 60 chr13 35870640 35870771 -84413541 - MTEb LTR MaLR -34 345 183 6 858 788 221 58 0 chr13 35870771 35870943 -84413369 - B3A SINE B2 -16 182 1 6 858 890 203 53 19 chr13 35870943 35871122 -84413190 - MTEb LTR MaLR -197 182 2 6 858 250 294 25 107 chr13 35871670 35871792 -84412520 + MER5A1 DNA MER1_type 38 149 -17 6 858 232 120 40 0 chr13 35872392 35872442 -84411870 + CT-rich Low_complexity Low_complexity 1 52 0 6 858 314 342 100 39 chr13 35872618 35872925 -84411387 - L1M5 LINE L1 -1352 4794 4459 6 858 972 212 9 33 chr13 35873670 35873885 -84410427 - B3 SINE B2 -5 211 2 6 858 996 153 6 23 chr13 35873924 35874098 -84410214 - URR1B DNA MER1_type 0 225 55 6 858 366 293 65 42 chr13 35873925 35874142 -84410170 + CYRA11_Mm Unknown Y-chromosome 172 393 -224 6 858 186 227 0 0 chr13 35874293 35874337 -84409975 + (CATG)n Simple_repeat Simple_repeat 1 44 0 6 858 488 126 60 1 chr13 35876359 35876452 -84407860 - ORR1E LTR MaLR 0 370 267 6 858 826 230 52 8 chr13 35876456 35876713 -84407599 - ORR1D1 LTR MaLR 0 359 72 6 858 204 158 0 0 chr13 35876713 35876751 -84407561 + (CATA)n Simple_repeat Simple_repeat 3 40 0 6 858 418 295 53 15 chr13 35876755 35876886 -84407426 - ORR1D2 LTR MaLR -233 137 2 6 858 353 247 66 5 chr13 35877303 35877424 -84406888 - B3A SINE B2 -51 144 12 6 858 234 231 0 0 chr13 35877886 35877925 -84406387 - B1F2 SINE Alu -109 40 2 6 858 306 0 0 0 chr13 35878148 35878182 -84406130 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 858 441 83 36 0 chr13 35878182 35878266 -84406046 + (GA)n Simple_repeat Simple_repeat 2 88 0 6 858 269 292 101 75 chr13 35878471 35878630 -84405682 - MTEa LTR MaLR -188 191 29 6 858 251 275 183 0 chr13 35878956 35879076 -84405236 + Tigger5 DNA MER2_type 2195 2336 -70 6 858 779 283 81 60 chr13 35879580 35880103 -84404209 - BLACKJACK DNA AcHobo -436 2508 1904 6 858 372 94 0 0 chr13 35880103 35880156 -84404156 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 858 397 306 111 106 chr13 35880156 35880393 -84403919 - BLACKJACK DNA AcHobo -1041 1903 1675 6 858 21 0 0 0 chr13 35880740 35880761 -84403551 + AT_rich Low_complexity Low_complexity 1 21 0 6 858 542 120 265 0 chr13 35881146 35881263 -84403049 + B1_Mus1 SINE Alu 1 148 0 6 858 453 263 147 26 chr13 35881312 35881503 -84402809 - BLACKJACK DNA AcHobo -2050 894 681 6 858 478 294 80 16 chr13 35881686 35881873 -84402439 - BLACKJACK DNA AcHobo -2745 199 1 6 858 495 276 6 95 chr13 35882246 35882258 -84402054 - B3 SINE B2 -59 157 147 6 858 204 97 0 0 chr13 35882258 35882289 -84402023 + (CGTG)n Simple_repeat Simple_repeat 1 31 0 6 858 575 252 14 41 chr13 35882289 35882444 -84401868 - B3A SINE B2 -70 146 5 6 858 578 244 149 5 chr13 35884585 35884779 -84399533 - MTEa LTR MaLR -157 222 1 6 858 183 258 174 92 chr13 35885103 35885201 -84399111 - L2a LINE L2 -8 3418 3313 6 858 234 242 145 0 chr13 35885640 35885702 -84398610 + B4 SINE B4 2 72 -220 6 858 28 0 0 0 chr13 35885741 35885769 -84398543 + AT_rich Low_complexity Low_complexity 1 28 0 7 858 1219 223 153 28 chr13 35887346 35887673 -84396639 + MTD LTR MaLR 4 371 -48 7 858 423 0 0 0 chr13 35887769 35887816 -84396496 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 858 279 0 0 0 chr13 35887816 35887846 -84396466 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 858 255 294 92 0 chr13 35889991 35890100 -84394212 - L1MB3 LINE L1 -46 6137 6019 7 858 372 306 73 9 chr13 35890488 35890597 -84393715 + ID_B1 SINE B4 82 197 -27 7 858 465 330 91 9 chr13 35891462 35891694 -84392618 + MIR SINE MIR 7 257 -5 7 858 226 24 98 0 chr13 35893550 35893591 -84390721 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 7 858 1157 278 74 41 chr13 35894207 35894571 -84389741 - MTE2a LTR MaLR -2 377 2 7 858 225 295 0 16 chr13 35894769 35894831 -84389481 + C-rich Low_complexity Low_complexity 1 61 0 7 858 409 295 9 0 chr13 35894832 35894937 -84389375 - PB1D9 SINE Alu -13 107 2 7 858 290 324 0 13 chr13 35895729 35895804 -84388508 - Tigger5 DNA MER2_type 0 2406 2333 7 858 185 73 0 89 chr13 35896417 35896462 -84387850 + T-rich Low_complexity Low_complexity 2 42 0 7 858 1007 86 0 7 chr13 35896483 35896624 -84387688 - B1_Mus2 SINE Alu 0 147 8 7 858 366 270 111 74 chr13 35896973 35897337 -84386975 - MTE2b LTR MaLR -8 371 1 7 858 283 308 91 21 chr13 35899408 35899594 -84384718 - ORR1D2 LTR MaLR 0 370 172 7 858 391 306 73 16 chr13 35900121 35900339 -84383973 - L1M4b LINE L1 -990 6016 5773 7 858 350 367 17 81 chr13 35902932 35903104 -84381208 + B4A SINE B4 5 165 -127 7 858 306 302 115 71 chr13 35903116 35903369 -84380943 - L1M4b LINE L1 -6219 1115 852 7 858 295 220 65 121 chr13 35903937 35904061 -84380251 - Tigger5 DNA MER2_type 0 2406 2290 7 858 303 314 187 11 chr13 35904056 35904243 -84380069 - Tigger5 DNA MER2_type -2164 242 23 7 858 29 60 0 0 chr13 35905616 35905666 -84378646 + AT_rich Low_complexity Low_complexity 1 50 0 7 858 265 269 38 25 chr13 35907383 35907463 -84376849 - PB1D10 SINE Alu -8 109 29 7 858 238 250 0 0 chr13 35907654 35907706 -84376606 + (TGG)n Simple_repeat Simple_repeat 2 53 0 7 858 440 321 196 8 chr13 35909976 35910221 -84374091 + Cheshire DNA MER1_type 1 291 -2129 7 858 545 258 15 15 chr13 35912027 35912157 -84372155 + B1F1 SINE Alu 1 130 -19 7 858 577 238 25 0 chr13 35912219 35912341 -84371971 + B3A SINE B2 4 128 -70 7 858 375 78 0 0 chr13 35912351 35912402 -84371910 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 858 282 274 27 0 chr13 35912412 35912485 -84371827 + B4A SINE B4 50 124 -168 7 858 352 228 89 89 chr13 35912543 35912644 -84371668 + B4A SINE B4 2 102 -190 7 858 363 96 0 0 chr13 35912856 35912908 -84371404 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 859 341 272 144 0 chr13 35913784 35913909 -84370403 - MER34A LTR ERV1 -108 463 321 7 859 835 226 17 11 chr13 35914396 35914571 -84369741 - B3 SINE B2 -26 190 15 7 859 239 289 84 0 chr13 35914685 35914768 -84369544 - L1MC4 LINE L1 -33 8009 7920 7 859 216 0 0 0 chr13 35917807 35917831 -84366481 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 859 276 149 0 0 chr13 35918140 35918187 -84366125 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 859 234 0 0 0 chr13 35918297 35918323 -84365989 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 859 300 27 0 0 chr13 35919202 35919239 -84365073 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 859 487 242 152 37 chr13 35919377 35919549 -84364763 - B3A SINE B2 -19 197 1 7 859 511 270 38 67 chr13 35920539 35920749 -84363563 - CYRA11_Mm Unknown Y-chromosome -240 377 174 7 859 1087 152 17 17 chr13 35920571 35920752 -84363560 + URR1A DNA MER1_type 46 226 0 7 859 479 145 0 0 chr13 35921582 35921651 -84362661 - RLTR33 LTR ERVK 0 678 610 7 859 2599 92 173 5 chr13 35921646 35922063 -84362249 - RLTR33 LTR ERVK -191 487 1 7 859 387 0 0 0 chr13 35922707 35922750 -84361562 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 859 237 327 30 0 chr13 35924185 35924286 -84360026 + PB1D10 SINE Alu 1 104 -13 7 859 1181 258 306 27 chr13 35924355 35925022 -84359290 - MMAR1 DNA Mariner -428 858 6 7 859 590 273 96 50 chr13 35925132 35925717 -84358595 - L1M4c LINE L1 -2356 4026 3415 7 859 292 136 155 0 chr13 35925761 35925843 -84358469 + PB1D9 SINE Alu 7 120 0 7 859 371 291 233 34 chr13 35925849 35926205 -84358107 - L1M4c LINE L1 -3300 3082 2656 7 859 272 296 118 12 chr13 35926355 35926516 -84357796 - B4 SINE B4 -114 178 1 7 859 265 145 32 0 chr13 35926930 35926992 -84357320 + CT-rich Low_complexity Low_complexity 2 65 0 7 859 226 300 33 61 chr13 35927299 35927480 -84356832 - L1M4c LINE L1 -4165 2219 2044 7 859 449 325 105 42 chr13 35927507 35928182 -84356130 - L1M4c LINE L1 -4481 1903 1186 7 859 193 128 21 21 chr13 35928302 35928350 -84355962 + T-rich Low_complexity Low_complexity 5 52 0 7 859 1061 63 42 0 chr13 35928350 35928492 -84355820 - B1_Mus1 SINE Alu 0 148 1 7 859 1102 82 0 64 chr13 35928619 35928776 -84355536 - B1_Mus1 SINE Alu 0 148 2 7 859 1984 154 77 3 chr13 35928886 35929238 -84355074 - ORR1C1 LTR MaLR 0 378 1 7 859 264 244 191 34 chr13 35929283 35929372 -84354940 - PB1D7 SINE Alu 0 120 18 7 859 243 0 0 0 chr13 35929630 35929657 -84354655 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7 859 180 0 0 0 chr13 35929739 35929759 -84354553 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 7 859 616 331 118 51 chr13 35930074 35930548 -84353764 - Lx8 LINE L1 -395 7078 6573 7 859 547 239 14 91 chr13 35931820 35931963 -84352349 + RSINE1 SINE B4 34 165 0 7 859 303 159 172 16 chr13 35932616 35932680 -84351632 - ID4 SINE ID -8 75 2 7 859 1952 168 23 39 chr13 35934342 35934726 -84349586 - ORR1C1 LTR MaLR 0 378 1 7 859 602 274 83 87 chr13 35936599 35936887 -84347425 - B4A SINE B4 -5 287 1 7 859 21 0 0 0 chr13 35936905 35936926 -84347386 + AT_rich Low_complexity Low_complexity 1 21 0 7 859 315 0 0 0 chr13 35937811 35937846 -84346466 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 859 429 299 118 30 chr13 35939332 35939501 -84344811 + B3A SINE B2 3 186 -12 7 859 826 220 23 94 chr13 35939841 35940129 -84344183 - ORR1C2 LTR MaLR -36 358 1 7 859 1617 179 162 14 chr13 35941635 35941998 -84342314 - MTD LTR MaLR -2 417 1 7 859 1456 59 5 16 chr13 35942590 35942780 -84341532 - B2_Mm2 SINE B2 -7 188 1 7 859 386 226 164 19 chr13 35943113 35943217 -84341095 - PB1D9 SINE Alu 0 120 2 7 859 340 214 80 13 chr13 35944339 35944441 -84339871 - MTC LTR MaLR 0 421 312 7 859 905 288 86 62 chr13 35945136 35945647 -84338665 + RLTR12B LTR ERVK 3 505 -22 7 859 297 0 0 0 chr13 35945881 35945914 -84338398 + (TTGG)n Simple_repeat Simple_repeat 4 36 0 7 859 529 223 10 0 chr13 35945914 35946017 -84338295 - PB1D9 SINE Alu -15 105 2 7 859 275 350 134 0 chr13 35947144 35947241 -84337071 - PB1D9 SINE Alu -10 110 1 7 859 275 316 0 84 chr13 35947166 35947249 -84337063 - B4 SINE B4 -137 155 80 7 859 649 259 45 22 chr13 35947315 35947493 -84336819 - B3A SINE B2 -16 182 1 7 859 312 275 29 0 chr13 35947674 35947743 -84336569 + ID4 SINE ID 13 83 0 7 859 403 228 115 29 chr13 35947882 35947986 -84336326 + PB1D9 SINE Alu 1 113 -7 7 859 25 0 0 0 chr13 35950565 35950590 -84333722 + AT_rich Low_complexity Low_complexity 1 25 0 7 859 252 262 32 97 chr13 35950660 35950687 -84333625 - L1MA8 LINE L1 -132 6159 6141 7 859 522 185 35 44 chr13 35950687 35950800 -84333512 - PB1D10 SINE Alu -5 112 1 7 859 252 262 32 97 chr13 35950800 35950865 -84333447 - L1MA8 LINE L1 -151 6140 6073 7 859 750 217 145 0 chr13 35951626 35951792 -84332520 - RMER30 DNA MER1_type -1 201 12 7 859 186 43 0 0 chr13 35952350 35952373 -84331939 + (TCCC)n Simple_repeat Simple_repeat 1 23 0 7 859 306 0 0 0 chr13 35956224 35956258 -84328054 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 859 335 327 171 9 chr13 35956426 35956642 -84327670 + L1MC4a LINE L1 7615 7865 -17 7 859 948 273 161 12 chr13 35957797 35958120 -84326192 - MTEb LTR MaLR -5 374 4 7 859 2970 278 179 29 chr13 35958125 35959468 -84324844 - MTEb-int LTR MaLR -2 1578 5 7 859 959 226 212 22 chr13 35959480 35959796 -84324516 - MTEb LTR MaLR -2 377 2 7 859 291 85 0 0 chr13 35960201 35960248 -84324064 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 7 859 246 32 0 0 chr13 35961383 35961414 -84322898 + (TTG)n Simple_repeat Simple_repeat 1 31 0 7 859 805 57 211 0 chr13 35961884 35962007 -84322305 + B1_Mur4 SINE Alu 2 150 0 7 859 25 0 0 0 chr13 35965432 35965457 -84318855 + AT_rich Low_complexity Low_complexity 1 25 0 7 859 216 0 0 0 chr13 35965999 35966023 -84318289 + (T)n Simple_repeat Simple_repeat 1 24 0 7 859 1300 57 0 0 chr13 35966948 35967107 -84317205 + B2_Mm2 SINE B2 2 160 -35 7 859 907 194 210 9 chr13 35967454 35967867 -84316445 - RMER20B LTR ERVK -63 564 1 7 859 315 298 21 0 chr13 35968587 35968681 -84315631 - PB1D10 SINE Alu -16 101 6 7 859 375 41 0 0 chr13 35968833 35968882 -84315430 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 859 471 214 59 17 chr13 35968946 35969065 -84315247 + B1F SINE Alu 21 144 -5 7 859 306 0 0 0 chr13 35969166 35969200 -84315112 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 7 859 241 267 16 48 chr13 35969257 35969320 -84314992 + BC1_Mm scRNA scRNA 24 84 -68 7 859 300 284 92 33 chr13 35969734 35969854 -84314458 + L1M5 LINE L1 5216 5342 -804 7 859 262 178 58 17 chr13 35970061 35970181 -84314131 + GA-rich Low_complexity Low_complexity 2 126 0 7 859 306 292 195 0 chr13 35970654 35970808 -84313504 + HAL1-3A_ME LINE L1 2256 2439 -419 7 859 327 224 8 25 chr13 35970811 35970930 -84313382 + GA-rich Low_complexity Low_complexity 2 118 0 7 859 860 115 15 8 chr13 35971250 35971381 -84312931 + B2_Mm2 SINE B2 60 191 -4 7 859 970 246 107 14 chr13 35971396 35971685 -84312627 + Lx8 LINE L1 6874 7189 -284 7 859 1109 115 71 11 chr13 35971705 35971889 -84312423 + B2_Mm2 SINE B2 1 195 0 8 859 857 255 125 43 chr13 35972189 35972534 -84311778 + MTEb LTR MaLR 5 377 -2 8 859 184 255 0 21 chr13 35972660 35972708 -84311604 - L2b LINE L2 -237 3138 3092 8 859 183 191 0 45 chr13 35973087 35973153 -84311159 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 859 238 247 34 73 chr13 35973153 35973233 -84311079 + (CACAC)n Simple_repeat Simple_repeat 3 80 0 8 859 603 62 0 0 chr13 35973233 35973313 -84310999 + (TA)n Simple_repeat Simple_repeat 1 80 0 8 859 354 219 50 28 chr13 35973313 35973480 -84310832 + (CA)n Simple_repeat Simple_repeat 1 170 0 8 859 209 164 55 0 chr13 35973503 35973576 -84310736 + (CA)n Simple_repeat Simple_repeat 1 77 0 8 859 382 136 57 45 chr13 35973618 35973795 -84310517 + (CA)n Simple_repeat Simple_repeat 2 180 0 8 859 500 319 94 26 chr13 35973822 35974089 -84310223 - MLT1B LTR MaLR -98 292 8 8 859 334 238 151 7 chr13 35974833 35974985 -84309327 + L1MB3 LINE L1 5915 6088 -95 8 859 316 237 13 0 chr13 35975077 35975153 -84309159 - ID4 SINE ID -4 79 3 8 859 1617 27 21 0 chr13 35975256 35975444 -84308868 - B2_Mm1t SINE B2 -1 192 1 8 859 669 190 95 0 chr13 35975469 35975585 -84308727 + B1_Mur2 SINE Alu 17 143 -6 8 859 324 0 0 0 chr13 35975585 35975621 -84308691 + (CAAT)n Simple_repeat Simple_repeat 1 36 0 8 859 1266 41 0 0 chr13 35975626 35975773 -84308539 + B1_Mm SINE Alu 1 147 0 8 859 189 107 0 0 chr13 35975775 35975803 -84308509 + (A)n Simple_repeat Simple_repeat 1 28 0 8 859 1194 47 0 0 chr13 35975803 35975952 -84308360 + (GGAGA)n Simple_repeat Simple_repeat 2 150 0 8 859 735 22 0 0 chr13 35976050 35976139 -84308173 + (TC)n Simple_repeat Simple_repeat 2 90 0 8 859 261 0 0 0 chr13 35976139 35976167 -84308145 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 859 273 29 0 0 chr13 35977114 35977148 -84307164 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 859 1091 67 0 7 chr13 35977436 35977464 -84306848 + (GAA)n Simple_repeat Simple_repeat 2 29 0 8 859 1167 84 0 17 chr13 35977464 35977645 -84306667 + (GGA)n Simple_repeat Simple_repeat 3 180 0 8 859 1091 67 0 7 chr13 35977645 35977766 -84306546 + (GAA)n Simple_repeat Simple_repeat 3 123 0 8 859 341 284 33 49 chr13 35977973 35978095 -84306217 - B1_Mus1 SINE Alu 0 148 29 8 859 480 306 0 0 chr13 35977989 35978123 -84306189 - ID_B1 SINE B4 -10 214 81 8 859 928 94 16 0 chr13 35978570 35978698 -84305614 + B1_Mm SINE Alu 18 147 0 8 859 706 284 113 14 chr13 35978713 35979059 -84305253 + L1MB4 LINE L1 4818 5197 -943 8 859 416 230 0 106 chr13 35979968 35980109 -84304203 + L1MB4 LINE L1 5305 5430 -738 8 859 1175 218 155 23 chr13 35980429 35980739 -84303573 - ORR1E LTR MaLR -8 351 1 8 859 682 299 89 26 chr13 35980833 35981180 -84303132 + L1MB4 LINE L1 5810 6178 -2 8 859 2466 130 16 6 chr13 35981302 35981665 -84302647 - ORR1B2 LTR MaLR 0 367 1 8 859 1281 268 86 33 chr13 35982006 35982067 -84302245 - MTD LTR MaLR 0 419 364 8 859 1894 180 73 3 chr13 35982067 35982255 -84302057 - ORR1C2 LTR MaLR -2 382 195 8 859 677 47 38 0 chr13 35982255 35982361 -84301951 + (GA)n Simple_repeat Simple_repeat 2 111 0 8 859 1894 180 73 3 chr13 35982361 35982529 -84301783 - ORR1C2 LTR MaLR -190 194 2 8 859 1281 268 86 33 chr13 35982529 35982861 -84301451 - MTD LTR MaLR -56 363 5 8 859 959 246 10 0 chr13 35982984 35983191 -84301121 + ID_B1 SINE B4 1 209 -15 8 859 518 360 86 63 chr13 35983295 35983772 -84300540 + MLT1H2 LTR MaLR 1 488 -1 8 859 661 215 25 8 chr13 35983856 35983978 -84300334 - B1_Mur1 SINE Alu 0 149 26 8 859 1144 121 29 6 chr13 35983994 35984169 -84300143 - B2_Mm2 SINE B2 -15 180 2 8 859 187 380 52 17 chr13 35984269 35984384 -84299928 + MIRb SINE MIR 135 253 -15 8 859 264 231 15 0 chr13 35986709 35986774 -84297538 + ID4 SINE ID 1 66 -17 8 859 369 95 0 0 chr13 35987234 35987297 -84297015 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 859 459 0 0 0 chr13 35987297 35987347 -84296965 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 859 635 228 327 29 chr13 35987658 35987970 -84296342 + MTC-int LTR MaLR 796 1200 -58 8 859 984 241 82 99 chr13 35987976 35988261 -84296051 + MTD LTR MaLR 6 294 -113 8 859 446 271 144 0 chr13 35989109 35989227 -84295085 - RSINE1 SINE B4 -29 136 2 8 859 268 276 75 19 chr13 35989254 35989361 -84294951 + BC1_Mm scRNA scRNA 2 114 -38 8 859 425 152 9 28 chr13 35989361 35989469 -84294843 + GA-rich Low_complexity Low_complexity 2 107 0 8 859 455 200 178 19 chr13 35989491 35989598 -84294714 - B1F1 SINE Alu -25 124 1 8 859 1211 62 0 0 chr13 35989669 35989815 -84294497 + B1_Mus1 SINE Alu 1 146 -2 8 859 191 61 30 0 chr13 35989816 35989849 -84294463 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 8 859 608 239 98 35 chr13 35990078 35990251 -84294061 + B3A SINE B2 9 192 -6 8 859 276 204 175 41 chr13 35990964 35991061 -84293251 - PB1D10 SINE Alu -3 114 5 8 859 625 317 43 33 chr13 35991417 35991719 -84292593 + LTR40a LTR ERVL 82 338 -124 8 859 1033 247 95 63 chr13 35991707 35992023 -84292289 + MLT2B3 LTR ERVL 9 334 -220 8 859 260 214 189 75 chr13 35992033 35992139 -84292173 + LTR40a LTR ERVL 331 448 -14 8 859 1393 60 16 11 chr13 35992185 35992369 -84291943 + B2_Mm2 SINE B2 2 186 -9 8 859 517 262 24 8 chr13 35994113 35994236 -84290076 - B1F SINE Alu -21 128 4 8 859 719 253 63 21 chr13 35994365 35994555 -84289757 - B3A SINE B2 0 198 1 8 859 496 239 0 64 chr13 35994596 35994721 -84289591 + PB1D10 SINE Alu 1 117 0 8 859 878 162 15 0 chr13 35994844 35994980 -84289332 + B1_Mus2 SINE Alu 10 147 0 8 859 1226 27 0 14 chr13 35995115 35995263 -84289049 + B1_Mm SINE Alu 2 147 0 8 859 1047 196 43 19 chr13 35995275 35995483 -84288829 - B3 SINE B2 -1 215 3 8 859 1526 86 184 88 chr13 35996571 35996865 -84287447 + ORR1A3 LTR MaLR 1 322 -4 8 859 402 21 0 0 chr13 35996866 35996913 -84287399 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 859 665 162 103 0 chr13 35996931 35997048 -84287264 - B1_Mur3 SINE Alu -11 138 10 8 859 750 79 10 0 chr13 35998385 35998486 -84285826 + B2_Mm1t SINE B2 1 102 -91 8 859 219 69 0 0 chr13 35998490 35998519 -84285793 + (GAAA)n Simple_repeat Simple_repeat 3 31 0 8 859 26 0 0 0 chr13 35998837 35998863 -84285449 + AT_rich Low_complexity Low_complexity 1 26 0 8 859 1171 86 0 0 chr13 35998931 35999082 -84285230 - B2_Mm2 SINE B2 -44 151 1 8 859 872 159 7 14 chr13 35999327 35999467 -84284845 - B1_Mur1 SINE Alu -2 147 9 8 859 435 283 36 95 chr13 35999467 35999495 -84284817 - B4 SINE B4 -69 223 66 8 859 202 279 0 0 chr13 36000152 36000195 -84284117 + polypurine Low_complexity Low_complexity 4 46 0 1 859 578 309 90 52 chr13 36000602 36001235 -84283077 + L1M2 LINE L1 1859 2585 -3997 2 859 833 286 9 0 chr13 36001245 36001458 -84282854 + ID_B1 SINE B4 4 218 -6 3 859 281 222 81 58 chr13 36001491 36001577 -84282735 + MT2B LTR ERVL 169 256 -345 4 859 608 133 19 28 chr13 36001509 36001617 -84282695 + B1_Mur3 SINE Alu 37 143 -6 5 859 353 61 38 66 chr13 36001909 36002015 -84282297 + A-rich Low_complexity Low_complexity 3 105 0 6 859 410 209 124 0 chr13 36002064 36002169 -84282143 + ORR1E-int LTR MaLR 1253 1370 0 7 859 574 131 74 9 chr13 36002169 36002277 -84282035 + ORR1E LTR MaLR 4 118 -241 7 859 1157 68 0 0 chr13 36002280 36002426 -84281886 - B1_Mm SINE Alu 0 147 2 8 859 434 302 38 73 chr13 36002491 36002752 -84281560 + L1M2 LINE L1 5715 5966 -879 2 859 1135 71 0 0 chr13 36002754 36002894 -84281418 + B1_Mus1 SINE Alu 3 142 -6 9 859 552 143 27 0 chr13 36002895 36003007 -84281305 + GA-rich Low_complexity Low_complexity 1 115 0 1 859 829 263 75 109 chr13 36003007 36003446 -84280866 + L1M2 LINE L1 5961 6384 -609 2 859 668 331 43 62 chr13 36003460 36003898 -84280414 + RLTR23 LTR ERV1 1 430 0 1 859 252 0 0 0 chr13 36003960 36003988 -84280324 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1 859 1125 90 0 0 chr13 36003988 36004133 -84280179 - B1_Mus2 SINE Alu -1 146 2 1 859 1693 229 13 60 chr13 36004134 36004366 -84279946 - RMER19C LTR ERVK -5 606 386 1 859 4909 50 2 3 chr13 36004366 36004954 -84279358 - LTRIS_Mus LTR ERV1 0 587 1 1 859 1693 229 13 60 chr13 36004954 36005191 -84279121 - RMER19C LTR ERVK -226 385 159 1 859 2492 153 59 64 chr13 36005191 36005750 -84278562 + RLTR20B1 LTR ERVK 1 556 -7 1 859 275 232 13 104 chr13 36005749 36005826 -84278486 - RMER19B LTR ERVK -524 378 309 1 859 363 164 30 0 chr13 36005847 36005914 -84278398 + L1MA4 LINE L1 5712 5780 -511 1 859 376 232 17 35 chr13 36005927 36006043 -84278269 + B1F SINE Alu 35 148 -1 1 859 369 271 150 5 chr13 36006050 36006280 -84278032 + L1MA4 LINE L1 5769 5998 -1475 1 859 696 231 8 0 chr13 36006560 36006690 -84277622 + B1F SINE Alu 9 139 -10 2 859 21 36 0 0 chr13 36006703 36006731 -84277581 + AT_rich Low_complexity Low_complexity 1 28 0 2 859 243 323 50 20 chr13 36007410 36007511 -84276801 + MLT1C LTR MaLR 356 459 -8 2 859 281 326 108 68 chr13 36007510 36007658 -84276654 + RSINE1 SINE B4 12 165 0 2 859 1483 40 23 0 chr13 36008966 36009143 -84275169 - B2_Mm2 SINE B2 -14 181 1 2 859 248 222 79 0 chr13 36009919 36009982 -84274330 - MamGypLTR1c LTR Gypsy -37 766 699 2 859 947 257 12 89 chr13 36010169 36010494 -84273818 - MT2A LTR ERVL -100 433 134 2 859 1445 72 0 39 chr13 36010891 36011094 -84273218 + B2_Mm2 SINE B2 1 195 0 2 859 2066 77 30 20 chr13 36011110 36011414 -84272898 + IAPLTR2b LTR ERVK 1 307 -20 2 859 5624 61 14 16 chr13 36011448 36012183 -84272129 - L1Md_F2 LINE L1 0 6582 5850 2 859 250 200 0 0 chr13 36012273 36012318 -84271994 - MLT1H LTR MaLR 0 549 505 3 859 454 262 46 13 chr13 36013268 36013419 -84270893 + MER5B DNA MER1_type 7 162 -16 3 859 640 223 259 0 chr13 36013738 36014033 -84270279 + MTEb LTR MaLR 9 379 0 3 859 357 24 0 0 chr13 36014211 36014253 -84270059 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 859 510 223 35 77 chr13 36014253 36014413 -84269899 - RSINE1 SINE B4 -8 157 3 3 859 1659 186 88 42 chr13 36014463 36014896 -84269416 - RMER6B LTR ERVK -6 455 3 3 859 438 36 0 0 chr13 36014994 36015050 -84269262 + (TTTTG)n Simple_repeat Simple_repeat 5 60 0 3 859 1121 59 0 0 chr13 36015050 36015185 -84269127 - B1_Mm SINE Alu -12 135 1 3 859 2299 241 80 11 chr13 36015428 36016145 -84268167 + L1_Mur3 LINE L1 3529 4294 -1586 3 859 1155 325 83 48 chr13 36016769 36017717 -84266595 + RLTR6-int LTR ERV1 1553 2498 -5280 3 859 666 329 37 30 chr13 36017760 36018223 -84266089 + RLTR6-int LTR ERV1 3878 4436 -3170 3 859 655 133 0 81 chr13 36018631 36018754 -84265558 + RLTR41 LTR ERV1 333 445 -1 4 859 225 65 0 0 chr13 36018928 36018959 -84265353 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 859 1807 219 114 9 chr13 36020238 36020675 -84263637 + Lx8 LINE L1 6595 7077 -396 4 859 360 0 0 0 chr13 36020686 36020726 -84263586 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 859 399 110 48 12 chr13 36020732 36020815 -84263497 + (CATATA)n Simple_repeat Simple_repeat 4 89 0 4 859 202 216 0 0 chr13 36020849 36020886 -84263426 + (CATA)n Simple_repeat Simple_repeat 3 39 0 4 859 21 36 0 0 chr13 36021261 36021289 -84263023 + AT_rich Low_complexity Low_complexity 1 28 0 4 859 616 179 10 96 chr13 36021319 36021514 -84262798 + RLTR25B LTR ERVK 757 1028 0 4 859 1118 246 31 31 chr13 36021770 36022060 -84262252 - B4 SINE B4 0 292 3 4 859 376 231 248 0 chr13 36022215 36022332 -84261980 - B1F2 SINE Alu -2 147 2 4 859 237 143 24 0 chr13 36022521 36022563 -84261749 + MTB LTR MaLR 358 400 0 5 859 1392 238 52 14 chr13 36022806 36023159 -84261153 - MTD LTR MaLR -44 335 10 5 859 1954 112 44 26 chr13 36023264 36023604 -84260708 + ORR1B1 LTR MaLR 41 386 -8 5 859 1419 271 48 31 chr13 36023643 36023809 -84260503 - L1MA8 LINE L1 -283 6008 5765 5 859 3159 56 5 8 chr13 36023809 36024206 -84260106 - MTA_Mm LTR MaLR 0 396 1 5 859 1419 246 33 35 chr13 36024206 36024569 -84259743 - L1MA8 LINE L1 -458 5833 5421 5 859 539 279 104 53 chr13 36024629 36024947 -84259365 - L1MCb LINE L1 -5034 1717 1384 5 859 938 70 0 0 chr13 36024964 36025092 -84259220 - B1_Mus1 SINE Alu 0 148 21 5 859 1084 168 34 15 chr13 36025092 36025297 -84259015 - B3 SINE B2 -5 211 3 5 859 391 225 191 60 chr13 36025299 36025550 -84258762 - L1MCb LINE L1 -5323 1428 1145 5 859 315 261 0 0 chr13 36025592 36025661 -84258651 - ID_B1 SINE B4 -62 162 94 5 859 267 227 50 62 chr13 36025593 36025673 -84258639 - B1F SINE Alu -66 83 5 5 859 357 236 11 0 chr13 36025675 36025764 -84258548 - L1MCb LINE L1 -5586 1165 1076 5 859 658 268 25 5 chr13 36025804 36026003 -84258309 - L1MCb LINE L1 -5134 911 709 5 859 1193 229 41 50 chr13 36026013 36026358 -84257954 - MT2B LTR ERVL 0 601 99 6 859 1933 146 129 139 chr13 36026362 36027215 -84257097 + RMER6C LTR ERVK 1 720 0 6 859 426 195 34 7 chr13 36027281 36027410 -84256902 - MT2B LTR ERVL -394 139 3 6 859 2439 199 21 53 chr13 36027410 36027990 -84256322 - RLTR31_Mm LTR ERVK 0 561 1 6 859 365 208 21 0 chr13 36027996 36028092 -84256220 - Tigger5 DNA MER2_type -137 2269 2172 6 859 250 274 145 69 chr13 36028101 36028246 -84256066 - Tigger5 DNA MER2_type -2163 243 90 6 859 325 256 49 49 chr13 36028247 36028329 -84255983 - RSINE1 SINE B4 -81 84 3 6 859 610 172 69 0 chr13 36028351 36028467 -84255845 + RSINE1 SINE B4 7 130 -35 6 859 429 20 0 0 chr13 36028501 36028551 -84255761 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 859 630 39 0 0 chr13 36028551 36028627 -84255685 + (GA)n Simple_repeat Simple_repeat 2 78 0 6 859 195 42 0 0 chr13 36028627 36028650 -84255662 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 6 859 22 0 0 0 chr13 36030238 36030260 -84254052 + AT_rich Low_complexity Low_complexity 1 22 0 6 859 739 208 196 0 chr13 36030264 36030437 -84253875 + B3 SINE B2 2 208 -8 7 859 650 191 8 18 chr13 36030493 36030641 -84253671 + B1_Mur1 SINE Alu 5 148 -1 7 859 303 140 0 0 chr13 36031243 36031293 -84253019 + (AGGGGG)n Simple_repeat Simple_repeat 1 50 0 7 859 327 256 113 0 chr13 36031388 36031521 -84252791 + B1_Mus1 SINE Alu 1 148 0 7 859 315 328 48 24 chr13 36031521 36031646 -84252666 + RSINE1 SINE B4 1 128 -37 7 859 273 164 99 0 chr13 36031710 36031779 -84252533 + B4 SINE B4 1 77 -215 7 859 264 258 75 11 chr13 36032761 36032855 -84251457 + ORR1E LTR MaLR 11 110 -249 7 859 2450 169 135 36 chr13 36033190 36033804 -84250508 - RMER13B LTR ERVK 0 908 234 7 859 3189 48 5 8 chr13 36033869 36034266 -84250046 - MTA_Mm LTR MaLR 0 396 1 7 859 340 172 0 30 chr13 36034271 36034337 -84249975 - RMER13B LTR ERVK -843 65 2 7 859 695 287 98 76 chr13 36034341 36034669 -84249643 - ORR1D2 LTR MaLR -35 335 1 7 859 378 315 18 0 chr13 36035651 36035668 -84248644 + ID SINE ID 68 86 -138 8 859 233 321 142 0 chr13 36035668 36035774 -84248538 + PB1 SINE Alu 4 124 -3 8 859 905 149 93 26 chr13 36035798 36035991 -84248321 - MTC LTR MaLR 0 421 216 8 859 2540 205 21 54 chr13 36035991 36036600 -84247712 + RLTR21 LTR ERVK 1 589 -983 8 859 512 150 0 0 chr13 36036595 36036675 -84247637 + RMER12B LTR ERVK 1280 1359 -45 8 859 1087 172 56 19 chr13 36036707 36036920 -84247392 - MTC LTR MaLR -200 221 1 8 859 222 217 101 0 chr13 36037066 36037135 -84247177 + ID SINE ID 1 76 -148 8 859 381 200 112 65 chr13 36038057 36038164 -84246148 + B1_Mur1 SINE Alu 3 114 -35 8 859 419 71 104 0 chr13 36038301 36038455 -84245857 + (TGGA)n Simple_repeat Simple_repeat 3 172 0 8 859 432 307 59 0 chr13 36038678 36038880 -84245432 + MER74A LTR ERVL 215 428 -130 8 859 536 306 65 20 chr13 36038933 36039133 -84245179 - B3 SINE B2 -6 210 2 8 859 327 179 60 0 chr13 36039167 36039234 -84245078 + PB1D7 SINE Alu 40 110 -10 9 859 550 182 111 0 chr13 36039979 36040105 -84244207 - B1_Mus1 SINE Alu 0 148 9 9 859 460 264 94 6 chr13 36041056 36041216 -84243096 + MLT1A0 LTR MaLR 76 249 -116 9 859 695 295 149 29 chr13 36041667 36042177 -84242135 - Charlie1a DNA MER1_type -488 967 397 9 859 3531 127 6 69 chr13 36042593 36043229 -84241083 + MT2B LTR ERVL 1 596 -5 9 859 3743 117 41 31 chr13 36043253 36043896 -84240416 + RLTR33 LTR ERVK 48 678 0 9 859 222 37 0 0 chr13 36044065 36044092 -84240220 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 9 859 700 189 87 0 chr13 36044092 36044219 -84240093 - B1_Mur3 SINE Alu -10 139 2 9 859 372 299 81 13 chr13 36044243 36044392 -84239920 + MTEa LTR MaLR 1 159 -220 9 859 2222 158 32 5 chr13 36044388 36044788 -84239524 - MTD LTR MaLR -8 411 1 9 107 651 279 62 27 chr13 36044788 36045013 -84239299 + MTEa LTR MaLR 147 379 0 9 860 268 200 171 0 chr13 36045213 36045283 -84239029 + ID4 SINE ID 1 82 -1 1 860 441 0 0 0 chr13 36045627 36045676 -84238636 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 1 860 226 264 0 0 chr13 36045678 36045731 -84238581 - PB1D10 SINE Alu -12 105 53 1 860 264 219 125 0 chr13 36046031 36046095 -84238217 - L1MC1 LINE L1 -37 6307 6236 1 860 386 285 53 29 chr13 36046257 36046427 -84237885 - L1MC1 LINE L1 -345 5988 5815 1 860 2155 127 29 0 chr13 36046449 36046765 -84237547 - ORR1A2 LTR MaLR 0 327 3 1 860 236 246 0 18 chr13 36046802 36046917 -84237395 + CT-rich Low_complexity Low_complexity 1 112 0 1 860 619 291 62 89 chr13 36047030 36047453 -84236859 + MTE2a LTR MaLR 3 391 -28 1 860 1047 251 56 16 chr13 36047816 36047990 -84236322 - MTD LTR MaLR -14 405 235 1 860 3846 121 128 13 chr13 36047990 36048668 -84235644 - RMER6A LTR ERVK 0 756 1 1 860 1047 250 54 16 chr13 36048668 36048819 -84235493 - MTD LTR MaLR -185 234 82 1 860 303 28 0 0 chr13 36048826 36048862 -84235450 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1 860 473 261 114 65 chr13 36048880 36049126 -84235186 - MLT1F LTR MaLR -4 544 287 1 860 296 272 0 0 chr13 36049570 36049662 -84234650 - L1MA4 LINE L1 -423 5877 5786 1 860 565 152 57 9 chr13 36049663 36049949 -84234363 + (TG)n Simple_repeat Simple_repeat 1 299 0 1 860 2626 53 9 0 chr13 36049949 36050271 -84234041 - ORR1A2 LTR MaLR 0 327 3 1 860 526 129 46 23 chr13 36050271 36050422 -84233890 + (TG)n Simple_repeat Simple_repeat 2 158 0 1 860 1647 156 19 150 chr13 36050562 36050983 -84233329 + ORR1B2 LTR MaLR 2 367 0 1 860 243 0 0 0 chr13 36052022 36052049 -84232263 + (AGGGGG)n Simple_repeat Simple_repeat 3 29 0 1 860 216 287 48 73 chr13 36052122 36052246 -84232066 + L2a LINE L2 3265 3385 -41 1 860 210 71 0 0 chr13 36052321 36052349 -84231963 + (GGA)n Simple_repeat Simple_repeat 3 30 0 1 860 213 264 0 0 chr13 36052665 36052737 -84231575 + (ATGGTG)n Simple_repeat Simple_repeat 1 72 0 1 860 2043 144 15 20 chr13 36052772 36053162 -84231150 + RLTR22_Mur LTR ERVK 1 388 -1460 1 860 207 0 0 0 chr13 36053235 36053258 -84231054 + (T)n Simple_repeat Simple_repeat 1 23 0 1 860 2323 152 16 98 chr13 36053259 36053895 -84230417 + RLTR22_Mur LTR ERVK 405 988 -860 1 860 21 0 0 0 chr13 36053895 36053916 -84230396 + AT_rich Low_complexity Low_complexity 1 21 0 1 860 563 168 109 0 chr13 36053979 36054098 -84230214 + B1_Mur2 SINE Alu 18 149 0 1 860 279 202 19 66 chr13 36054098 36054160 -84230152 + A-rich Low_complexity Low_complexity 5 62 0 1 860 600 191 9 9 chr13 36054160 36054271 -84230041 + PB1D9 SINE Alu 3 113 -7 1 860 279 202 19 66 chr13 36054271 36054314 -84229998 + A-rich Low_complexity Low_complexity 63 105 0 1 860 624 271 24 6 chr13 36054387 36054554 -84229758 - B3 SINE B2 -6 210 41 1 860 317 250 0 0 chr13 36054701 36054765 -84229547 - B4A SINE B4 -2 290 227 1 860 357 24 0 0 chr13 36054787 36054829 -84229483 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 1 860 1146 62 0 0 chr13 36054829 36054975 -84229337 - B1_Mus2 SINE Alu 0 147 2 1 860 718 201 14 7 chr13 36054985 36055130 -84229182 - B1_Mur1 SINE Alu 0 149 4 1 860 544 299 78 19 chr13 36055134 36055339 -84228973 - B4A SINE B4 -62 230 14 1 860 216 0 0 0 chr13 36055417 36055441 -84228871 + (T)n Simple_repeat Simple_repeat 1 24 0 1 860 986 281 65 24 chr13 36055457 36055796 -84228516 - MER34-int LTR ERV1 -767 7440 7088 1 860 192 130 36 36 chr13 36056021 36056077 -84228235 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 860 368 242 0 11 chr13 36056239 36056331 -84227981 - Tigger5 DNA MER2_type 0 2406 2316 1 860 383 229 36 62 chr13 36056401 36056471 -84227841 - Tigger5 DNA MER2_type -2291 115 44 1 860 225 83 0 0 chr13 36056471 36056507 -84227805 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 860 383 229 36 62 chr13 36056507 36056548 -84227764 - Tigger5 DNA MER2_type -2363 43 7 1 860 333 338 238 34 chr13 36056972 36057379 -84226933 + LTR31 LTR ERV1 115 604 -15 1 860 250 167 10 72 chr13 36057465 36057547 -84226765 + (TTATA)n Simple_repeat Simple_repeat 5 82 0 1 860 225 0 0 0 chr13 36057547 36057572 -84226740 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 860 250 167 10 72 chr13 36057572 36057586 -84226726 + (TTATA)n Simple_repeat Simple_repeat 2 14 0 1 860 2172 121 16 0 chr13 36057625 36057947 -84226365 - ORR1A2 LTR MaLR 0 327 1 1 860 440 296 113 75 chr13 36058051 36058369 -84225943 + MER21B LTR ERV1 406 735 -128 1 860 853 131 71 14 chr13 36058495 36058635 -84225677 + B1_Mur4 SINE Alu 2 149 -1 1 860 219 252 162 19 chr13 36059258 36059363 -84224949 + MER5A DNA MER1_type 2 121 -68 1 860 7404 38 3 2 chr13 36062700 36063581 -84220731 - L1Md_F3 LINE L1 0 6584 5703 1 860 10423 65 2 4 chr13 36063576 36064935 -84219377 - L1_Mm LINE L1 -2169 3714 2358 1 860 542 214 0 0 chr13 36064950 36065048 -84219264 - PB1D9 SINE Alu -9 111 14 1 860 473 150 7 50 chr13 36065058 36065198 -84219114 + (TCCA)n Simple_repeat Simple_repeat 1 134 0 1 860 619 129 73 88 chr13 36065199 36065335 -84218977 - B1_Mus2 SINE Alu -13 134 1 1 860 3652 72 17 4 chr13 36065348 36065824 -84218488 - L1_Mus1 LINE L1 0 6567 6086 1 860 928 104 303 6 chr13 36066924 36067089 -84217223 - B3 SINE B2 -1 215 2 1 860 22 0 0 0 chr13 36067090 36067112 -84217200 + AT_rich Low_complexity Low_complexity 1 22 0 1 860 354 340 184 7 chr13 36067583 36067876 -84216436 - MER2 DNA MER2_type 0 345 1 1 860 2131 168 150 21 chr13 36068242 36068308 -84216004 - RLTR11A LTR ERVK 0 528 460 1 860 324 0 0 0 chr13 36068308 36068344 -84215968 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 860 2131 168 150 21 chr13 36068344 36068656 -84215656 - RLTR11A LTR ERVK -69 459 113 1 860 258 32 0 0 chr13 36068656 36068687 -84215625 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 860 2131 168 150 21 chr13 36068687 36068775 -84215537 - RLTR11A LTR ERVK -416 112 1 1 860 2286 141 44 8 chr13 36069435 36069800 -84214512 + ORR1C1 LTR MaLR 1 378 0 1 860 467 271 69 8 chr13 36069912 36070042 -84214270 - B1F1 SINE Alu -11 138 1 1 860 580 305 85 37 chr13 36070055 36070327 -84213985 - B4A SINE B4 -7 285 1 1 860 27 29 0 0 chr13 36070672 36070706 -84213606 + AT_rich Low_complexity Low_complexity 1 34 0 1 860 703 226 23 99 chr13 36070714 36070935 -84213377 - B3 SINE B2 -10 206 3 1 860 387 261 69 27 chr13 36071814 36071930 -84212382 - PB1D10 SINE Alu -25 124 7 1 860 499 237 105 0 chr13 36072669 36072783 -84211529 - B1_Mur3 SINE Alu -16 133 8 1 860 374 276 123 51 chr13 36073398 36073593 -84210719 + RLTR42-int LTR ERVK 1156 1364 -4158 1 860 545 165 10 58 chr13 36074206 36074309 -84210003 - B1_Mur2 SINE Alu 0 149 52 1 860 732 94 231 0 chr13 36075768 36075885 -84208427 - B1_Mus1 SINE Alu -2 146 3 1 860 1057 206 65 109 chr13 36075894 36076215 -84208097 - MTE2a LTR MaLR -67 312 6 1 860 1791 15 0 0 chr13 36076303 36076509 -84207803 - L1Md_T LINE L1 0 6582 6377 1 860 306 0 0 0 chr13 36076530 36076564 -84207748 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 860 646 248 110 7 chr13 36076566 36076720 -84207592 - B3A SINE B2 -28 170 1 1 860 263 311 42 0 chr13 36076838 36076957 -84207355 - L1M5 LINE L1 -440 5684 5561 1 860 629 220 42 21 chr13 36077260 36077404 -84206908 - B1_Mur4 SINE Alu -2 148 2 1 860 1152 95 0 0 chr13 36077764 36077912 -84206400 + B1_Mus1 SINE Alu 1 148 0 1 860 219 69 0 0 chr13 36077912 36077941 -84206371 + (A)n Simple_repeat Simple_repeat 1 29 0 1 860 217 284 0 82 chr13 36079803 36079876 -84204436 - L2a LINE L2 -19 3407 3341 1 860 588 300 24 59 chr13 36080053 36080223 -84204089 + RSINE1 SINE B4 2 165 0 1 860 271 275 53 35 chr13 36080295 36080408 -84203904 + PB1D9 SINE Alu 5 119 -1 1 860 458 285 23 15 chr13 36080464 36080596 -84203716 - B1F SINE Alu -16 133 1 1 860 214 317 99 0 chr13 36081553 36081654 -84202658 + BC1_Mm scRNA scRNA 1 111 -41 1 860 186 43 0 0 chr13 36082070 36082093 -84202219 + (T)n Simple_repeat Simple_repeat 1 23 0 1 860 180 77 0 0 chr13 36082468 36082494 -84201818 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1 860 327 25 0 0 chr13 36083716 36083756 -84200556 + (CCAA)n Simple_repeat Simple_repeat 2 41 0 1 860 333 0 0 0 chr13 36085175 36085212 -84199100 + (GA)n Simple_repeat Simple_repeat 2 38 0 1 860 180 135 26 26 chr13 36085231 36085269 -84199043 + L3 LINE CR1 1263 1300 -3189 1 860 4561 116 50 10 chr13 36086348 36087052 -84197260 + RMER19A LTR ERVK 3 734 -3 1 860 1489 163 194 52 chr13 36089048 36089372 -84194940 + ORR1C1 LTR MaLR 1 370 -8 1 860 608 133 20 0 chr13 36090136 36090234 -84194078 - PB1D9 SINE Alu 0 120 21 1 860 853 244 98 0 chr13 36090677 36090870 -84193442 + B3 SINE B2 1 212 -4 1 860 879 102 0 0 chr13 36090939 36091057 -84193255 + B2_Mm2 SINE B2 1 118 -77 1 860 785 204 1 14 chr13 36091056 36091224 -84193088 - ORR1C2 LTR MaLR -4 380 207 1 860 937 177 0 7 chr13 36091252 36091400 -84192912 + B1_Mus2 SINE Alu 1 147 0 1 860 243 79 0 0 chr13 36091418 36091456 -84192856 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 1 860 182 174 22 0 chr13 36091982 36092028 -84192284 + (CACCAT)n Simple_repeat Simple_repeat 5 51 0 1 860 1825 143 137 6 chr13 36092031 36092368 -84191944 + ORR1C2 LTR MaLR 1 381 -3 1 860 1191 251 154 18 chr13 36092830 36093272 -84191040 + RMER5 LTR ERV1 33 534 0 1 860 360 292 124 0 chr13 36093337 36093450 -84190862 + B1F SINE Alu 2 128 -21 1 860 955 248 145 0 chr13 36093522 36093832 -84190480 + ORR1E LTR MaLR 5 359 0 1 860 377 317 74 32 chr13 36094394 36094583 -84189729 + ORR1E LTR MaLR 1 197 -162 1 860 478 318 13 73 chr13 36095725 36096027 -84188285 + L1MB8 LINE L1 5647 5930 -248 1 860 430 254 350 14 chr13 36096266 36096474 -84187838 + MER33 DNA MER1_type 37 314 -10 2 860 8105 7 8 0 chr13 36097603 36098528 -84185784 - L1Md_A LINE L1 -2438 3445 2514 2 860 19129 7 0 0 chr13 36098527 36100648 -84183664 + L1Md_A LINE L1 3466 5586 -297 2 860 9109 8 0 0 chr13 36100648 36101644 -84182668 + L1Md_A LINE L1 5587 6582 0 2 860 238 278 14 0 chr13 36101820 36101892 -84182420 + ID4_ SINE ID 3 75 -8 2 860 207 355 40 0 chr13 36101990 36102066 -84182246 - MER5B DNA MER1_type -54 124 46 2 860 374 270 44 155 chr13 36102094 36102480 -84181832 + RMER17C LTR ERVK 1 343 -67 2 860 283 125 268 0 chr13 36102514 36102570 -84181742 - L1MB8 LINE L1 -196 5982 5912 2 860 516 281 82 0 chr13 36102632 36102803 -84181509 - L1MB8 LINE L1 -422 5752 5568 2 860 1092 105 64 12 chr13 36103023 36103196 -84181116 - B2_Mm2 SINE B2 -11 184 3 2 860 332 329 137 19 chr13 36103286 36103497 -84180815 + L1MC5 LINE L1 7652 7887 -74 2 860 1285 81 23 6 chr13 36103552 36103727 -84180585 + B2_Mm2 SINE B2 2 179 -16 2 860 180 0 0 0 chr13 36103727 36103747 -84180565 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 860 348 172 215 0 chr13 36104082 36104175 -84180137 + ORR1E LTR MaLR 4 116 -243 2 860 293 259 103 0 chr13 36104234 36104350 -84179962 - L1MB3 LINE L1 -296 5887 5760 2 860 2154 67 32 0 chr13 36104473 36104758 -84179554 + ORR1A2 LTR MaLR 1 294 -33 2 860 241 273 26 13 chr13 36105203 36105281 -84179031 - L1MB7 LINE L1 -67 6111 6033 2 860 259 306 105 0 chr13 36105649 36105773 -84178539 - L1MB7 LINE L1 -198 5986 5850 2 860 776 315 84 17 chr13 36106380 36106420 -84177892 - L1M2 LINE L1 -508 5804 5769 2 860 995 194 164 46 chr13 36106420 36106749 -84177563 - ORR1D2 LTR MaLR 0 370 3 2 860 841 303 51 8 chr13 36106749 36107125 -84177187 - L1MA5 LINE L1 -544 5768 5360 2 860 1075 255 166 35 chr13 36107118 36107577 -84176735 + L1MA5 LINE L1 5782 6300 0 2 860 183 228 115 42 chr13 36108799 36108895 -84175417 + MIR3 SINE MIR 14 116 -92 2 860 254 238 60 48 chr13 36109344 36109428 -84174884 - BC1_Mm scRNA scRNA -66 86 2 2 860 568 336 7 0 chr13 36109458 36109598 -84174714 - RSINE1 SINE B4 0 165 25 2 860 554 305 40 11 chr13 36109987 36110163 -84174149 + MLT1G3 LTR MaLR 205 385 -210 2 860 222 37 0 0 chr13 36112215 36112242 -84172070 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 860 270 317 28 98 chr13 36112277 36112531 -84171781 - MIRc SINE MIR -6 262 16 2 860 27 29 0 0 chr13 36112754 36112788 -84171524 + AT_rich Low_complexity Low_complexity 1 34 0 2 860 245 184 82 0 chr13 36113842 36113891 -84170421 + L1MA5 LINE L1 6232 6284 -16 2 860 265 293 157 8 chr13 36114165 36114299 -84170013 + RMER15 LTR ERVL 422 575 0 2 860 2248 109 28 18 chr13 36115796 36116122 -84168190 + ORR1A4 LTR MaLR 1 329 0 2 860 2056 121 15 57 chr13 36116874 36117206 -84167106 + ORR1A3 LTR MaLR 1 318 -8 2 860 596 239 61 30 chr13 36117233 36117397 -84166915 + RMER5 LTR ERV1 361 529 -5 2 860 314 270 51 59 chr13 36117470 36117563 -84166749 + B3 SINE B2 100 191 -25 2 860 342 0 0 0 chr13 36117563 36117601 -84166711 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 860 314 270 51 59 chr13 36117601 36117625 -84166687 + B3 SINE B2 192 215 -1 2 860 288 0 0 0 chr13 36118675 36118707 -84165605 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 2 860 1167 107 6 0 chr13 36118707 36118866 -84165446 - B2_Mm1t SINE B2 -33 160 1 2 860 313 278 72 0 chr13 36119599 36119696 -84164616 + MIR SINE MIR 61 164 -98 2 860 233 326 115 8 chr13 36120123 36120253 -84164059 + MIRc SINE MIR 2 145 -123 2 860 969 201 175 98 chr13 36120299 36120585 -84163727 + ORR1B2 LTR MaLR 1 346 -21 2 860 361 311 117 73 chr13 36120926 36121200 -84163112 - ORR1E LTR MaLR -7 352 67 2 860 236 288 0 21 chr13 36122209 36122291 -84162021 + MIRm SINE MIR 90 168 -100 2 860 261 0 0 0 chr13 36122731 36122760 -84161552 + (T)n Simple_repeat Simple_repeat 1 29 0 2 860 566 151 0 0 chr13 36124662 36124748 -84159564 + ORR1D1 LTR MaLR 289 374 0 2 860 342 0 0 0 chr13 36125254 36125292 -84159020 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 860 192 125 0 0 chr13 36125406 36125438 -84158874 + (TATG)n Simple_repeat Simple_repeat 1 32 0 2 860 202 246 45 15 chr13 36125439 36125505 -84158807 + (CATATA)n Simple_repeat Simple_repeat 6 73 0 2 860 2276 82 52 0 chr13 36126286 36126591 -84157721 + L1_Mus3 LINE L1 6300 6620 -18 2 860 279 0 0 0 chr13 36126591 36126622 -84157690 + (CAA)n Simple_repeat Simple_repeat 2 32 0 2 860 743 264 29 0 chr13 36126904 36127078 -84157234 - B3A SINE B2 -18 180 2 2 860 548 212 231 17 chr13 36127549 36127722 -84156590 + B3 SINE B2 1 210 -6 2 860 418 256 156 32 chr13 36127774 36127960 -84156352 + MER2 DNA MER2_type 85 293 -52 2 860 572 194 61 0 chr13 36129549 36129647 -84154665 + PB1D9 SINE Alu 3 106 -14 2 860 387 0 0 0 chr13 36129649 36129692 -84154620 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 2 860 327 306 206 34 chr13 36129770 36130240 -84154072 - L1M5 LINE L1 -792 5354 4804 2 860 829 272 62 54 chr13 36130559 36130819 -84153493 - B4 SINE B4 -4 288 27 2 860 931 136 7 0 chr13 36130831 36130971 -84153341 - B1_Mur3 SINE Alu 0 149 9 2 860 21 0 0 0 chr13 36131328 36131349 -84152963 + AT_rich Low_complexity Low_complexity 1 21 0 2 860 202 150 25 0 chr13 36131485 36131525 -84152787 + A-rich Low_complexity Low_complexity 6 46 0 2 860 400 322 94 17 chr13 36132002 36132182 -84152130 - B3A SINE B2 -4 194 1 2 860 10772 151 15 59 chr13 36132678 36133422 -84150890 + L1_Mur3 LINE L1 3449 4199 -1681 2 860 183 80 0 0 chr13 36133422 36133447 -84150865 + (TA)n Simple_repeat Simple_repeat 2 26 0 2 860 10772 151 15 59 chr13 36133447 36134502 -84149810 + L1_Mur3 LINE L1 4200 5187 -693 2 860 324 0 0 0 chr13 36134502 36134538 -84149774 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 2 860 10772 151 15 59 chr13 36134538 36134656 -84149656 + L1_Mur3 LINE L1 5188 5278 -602 2 860 701 92 7 90 chr13 36134656 36134800 -84149512 + Lx3C LINE L1 6844 6975 -1 2 860 10772 151 15 59 chr13 36134800 36134984 -84149328 + L1_Mur3 LINE L1 5279 5456 -424 2 860 307 232 12 47 chr13 36135698 36135784 -84148528 + L1MC4 LINE L1 7818 7900 -142 2 860 2202 161 34 6 chr13 36136018 36136374 -84147938 + ORR1B2 LTR MaLR 2 367 0 2 860 889 170 13 33 chr13 36136600 36136752 -84147560 - B1_Mur3 SINE Alu 0 149 1 2 860 1018 283 50 36 chr13 36137022 36137398 -84146914 + MLT2B4 LTR ERVL 3 349 -65 2 860 272 100 0 74 chr13 36137430 36137484 -84146828 + MMETn-int LTR ERVK 4795 4844 0 2 860 1031 208 41 99 chr13 36137484 36137826 -84146486 + RLTRETN_Mm LTR ERVK 1 322 0 2 860 1277 28 14 0 chr13 36138152 36138297 -84146015 + B1_Mus1 SINE Alu 2 148 0 2 860 231 173 0 0 chr13 36138622 36138674 -84145638 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 860 641 259 31 77 chr13 36138720 36138942 -84145370 - B3 SINE B2 -4 212 1 2 860 23 54 0 0 chr13 36138969 36139006 -84145306 + AT_rich Low_complexity Low_complexity 1 37 0 2 860 559 219 16 39 chr13 36140722 36140850 -84143462 - B1_Mur4 SINE Alu -2 148 24 2 860 24 0 0 0 chr13 36140850 36140874 -84143438 + AT_rich Low_complexity Low_complexity 1 24 0 2 860 469 192 35 27 chr13 36143635 36143764 -84140548 - B1F SINE Alu 0 149 30 2 860 430 275 60 53 chr13 36143644 36143794 -84140518 - ID_B1 SINE B4 0 224 74 2 860 213 333 0 28 chr13 36144200 36144271 -84140041 - B1_Mus1 SINE Alu -51 97 29 2 860 436 326 161 18 chr13 36144485 36144759 -84139553 + MLT1H1 LTR MaLR 3 321 -270 2 860 957 172 176 5 chr13 36145057 36145250 -84139062 - URR1A DNA MER1_type 0 226 1 2 860 260 215 96 48 chr13 36146090 36146173 -84138139 - MARNA DNA Mariner -196 390 304 2 860 947 284 0 0 chr13 36146941 36147149 -84137163 - B3 SINE B2 -7 209 2 2 860 27 0 0 0 chr13 36147433 36147460 -84136852 + AT_rich Low_complexity Low_complexity 1 27 0 2 860 1119 85 0 41 chr13 36147526 36147673 -84136639 + B1_Mus2 SINE Alu 1 141 -6 2 860 198 0 0 0 chr13 36147674 36147696 -84136616 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 2 860 417 295 105 16 chr13 36147897 36148021 -84136291 - ID_B1 SINE B4 -1 223 89 2 860 310 363 69 49 chr13 36148026 36148376 -84135936 + ORR1E LTR MaLR 3 359 0 2 860 603 294 21 0 chr13 36150142 36150285 -84134027 - RSINE1 SINE B4 -19 146 1 2 860 996 308 63 27 chr13 36150336 36150857 -84133455 - L1MB3 LINE L1 -29 6154 5615 2 860 608 333 0 0 chr13 36150923 36151064 -84133248 - B1_Mur2 SINE Alu -8 141 1 2 860 316 310 31 94 chr13 36150959 36151087 -84133225 - MT2B LTR ERVL -343 258 139 2 860 351 299 68 36 chr13 36154206 36154428 -84129884 + L1MA7 LINE L1 6061 6289 -2 2 860 236 299 45 0 chr13 36154552 36154619 -84129693 - ID4_ SINE ID -6 77 8 2 860 12516 55 30 0 chr13 36154871 36155280 -84129032 + L1_Mm LINE L1 3965 4373 -1510 2 860 5188 55 30 8 chr13 36155280 36155920 -84128392 + L1Md_F2 LINE L1 5929 6582 0 2 860 12516 55 30 0 chr13 36155920 36157086 -84127226 + L1_Mm LINE L1 4374 5585 -298 2 860 8867 36 2 3 chr13 36157086 36158082 -84126230 + L1Md_F2 LINE L1 5588 6582 0 2 860 21 36 0 0 chr13 36158147 36158175 -84126137 + AT_rich Low_complexity Low_complexity 1 28 0 2 860 1845 166 81 29 chr13 36158860 36159270 -84125042 - Lx7 LINE L1 0 7696 7266 2 860 6213 44 1 6 chr13 36159362 36160075 -84124237 - L1Md_F2 LINE L1 -12 6570 5861 2 860 186 128 0 0 chr13 36160617 36160656 -84123656 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 2 860 31 0 0 0 chr13 36160751 36160782 -84123530 + AT_rich Low_complexity Low_complexity 1 31 0 2 860 4941 57 9 0 chr13 36160814 36161397 -84122915 + L1_Mus1 LINE L1 5980 6567 0 2 860 344 128 75 25 chr13 36161411 36161491 -84122821 - Lx3_Mus LINE L1 -11 6998 6915 2 860 371 146 0 0 chr13 36161491 36161546 -84122766 + Lx3_Mus LINE L1 6750 6804 -205 2 860 22 0 0 0 chr13 36162027 36162049 -84122263 + AT_rich Low_complexity Low_complexity 1 22 0 2 860 972 70 0 0 chr13 36162266 36162395 -84121917 + B1_Mus1 SINE Alu 20 148 0 2 860 426 305 81 19 chr13 36163429 36163796 -84120516 + L1MC4 LINE L1 7292 7778 -217 3 860 5595 49 32 3 chr13 36165226 36165816 -84118496 + L1Md_F2 LINE L1 5894 6481 -101 3 860 188 0 74 0 chr13 36165816 36165843 -84118469 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 3 860 5595 49 32 3 chr13 36165843 36165910 -84118402 + L1Md_F2 LINE L1 6482 6568 -14 3 860 530 261 182 44 chr13 36165913 36166254 -84118058 + L1MB8 LINE L1 5504 5891 -287 3 860 198 0 0 0 chr13 36166281 36166303 -84118009 + (CTCTG)n Simple_repeat Simple_repeat 2 23 0 3 860 1164 227 138 6 chr13 36166326 36166659 -84117653 + MTD LTR MaLR 13 389 -30 3 860 1474 78 5 0 chr13 36166907 36167112 -84117200 - Lx3_Mus LINE L1 0 7009 6804 3 860 423 288 8 8 chr13 36167552 36167685 -84116627 + MT2B LTR ERVL 467 599 -2 3 860 274 359 57 6 chr13 36168862 36169019 -84115293 - MER5B DNA MER1_type -3 175 11 3 860 217 186 23 0 chr13 36170497 36170540 -84113772 + (CAA)n Simple_repeat Simple_repeat 2 45 0 3 860 237 187 132 13 chr13 36170879 36170955 -84113357 - MTEb LTR MaLR -14 365 281 3 860 792 78 23 15 chr13 36171552 36171682 -84112630 + (TTTCC)n Simple_repeat Simple_repeat 5 135 0 3 860 189 171 0 0 chr13 36171682 36171717 -84112595 + CT-rich Low_complexity Low_complexity 1 35 0 3 860 224 302 16 0 chr13 36171736 36171799 -84112513 - ID SINE ID -159 65 2 3 860 379 198 71 30 chr13 36171921 36172020 -84112292 + PB1D10 SINE Alu 14 116 -1 3 860 575 279 61 24 chr13 36172122 36172335 -84111977 + MER2 DNA MER2_type 120 340 -5 3 860 305 231 13 0 chr13 36174969 36175047 -84109265 + ID4 SINE ID 2 80 -3 3 861 1438 39 79 0 chr13 36175993 36176152 -84108160 + B2_Mm1t SINE B2 2 160 -33 3 861 207 0 0 0 chr13 36176152 36176175 -84108137 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 3 861 1438 39 79 0 chr13 36176175 36176193 -84108119 + B2_Mm1t SINE B2 161 191 -2 3 861 853 227 24 29 chr13 36177230 36177439 -84106873 - B3 SINE B2 0 216 9 3 861 700 263 109 18 chr13 36178367 36178650 -84105662 - L1MB2 LINE L1 -2 6169 5861 3 861 226 268 119 40 chr13 36178665 36178766 -84105546 - L1M4 LINE L1 -358 5816 5708 3 861 302 237 229 31 chr13 36180444 36180540 -84103772 + PB1D10 SINE Alu 2 116 -1 3 861 1043 98 28 0 chr13 36180999 36181142 -84103170 - B1_Mus2 SINE Alu 0 147 1 3 861 244 294 155 17 chr13 36182055 36182233 -84102079 - MIR SINE MIR -21 241 46 3 861 245 346 12 24 chr13 36183156 36183239 -84101073 - ID4 SINE ID 0 83 2 3 861 246 326 112 27 chr13 36183445 36183669 -84100643 + Tigger10 DNA Tigger 773 1015 -828 3 861 22 35 0 0 chr13 36184846 36184875 -84099437 + AT_rich Low_complexity Low_complexity 1 29 0 3 861 415 252 19 0 chr13 36185281 36185384 -84098928 - PB1D10 SINE Alu 0 117 13 3 861 189 107 0 0 chr13 36185412 36185440 -84098872 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 3 861 610 155 42 25 chr13 36185446 36185565 -84098747 - B1_Mus2 SINE Alu -8 139 19 3 861 468 0 0 0 chr13 36185566 36185618 -84098694 + (CCA)n Simple_repeat Simple_repeat 2 53 0 3 861 180 0 0 0 chr13 36185850 36185870 -84098442 + (T)n Simple_repeat Simple_repeat 1 20 0 3 861 329 304 82 63 chr13 36186117 36186275 -84098037 + RSINE1 SINE B4 5 165 0 3 861 444 322 58 88 chr13 36187055 36187113 -84097199 + MTE2a LTR MaLR 2 55 -364 3 861 6527 48 4 0 chr13 36187113 36187900 -84096412 - L1Md_F2 LINE L1 -1 6581 5792 3 861 703 286 36 62 chr13 36187900 36188171 -84096141 + MTE2a LTR MaLR 51 321 -98 3 861 212 77 0 25 chr13 36190006 36190046 -84094266 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 3 861 24 0 0 0 chr13 36190931 36190955 -84093357 + AT_rich Low_complexity Low_complexity 1 24 0 3 861 1317 79 23 0 chr13 36191488 36191665 -84092647 + B2_Mm2 SINE B2 1 181 -14 3 861 292 73 55 0 chr13 36191742 36191797 -84092515 + B2_Mm2 SINE B2 137 194 -1 3 861 21 36 0 0 chr13 36192406 36192434 -84091878 + AT_rich Low_complexity Low_complexity 1 28 0 3 861 1158 61 0 7 chr13 36192725 36192873 -84091439 + B1_Mus2 SINE Alu 1 147 0 3 861 231 254 0 0 chr13 36193087 36193150 -84091162 + PB1D10 SINE Alu 53 115 -2 3 861 615 246 73 34 chr13 36193462 36193660 -84090652 + ID_B1 SINE B4 9 216 -8 3 861 3667 66 4 15 chr13 36193660 36194138 -84090174 + L1_Mus1 LINE L1 6094 6566 -1 3 861 534 70 0 0 chr13 36194149 36194220 -84090092 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 861 664 264 98 14 chr13 36194835 36195039 -84089273 + B4A SINE B4 9 230 -62 3 861 436 314 14 7 chr13 36195039 36195177 -84089135 + B4A SINE B4 2 140 -152 3 861 333 0 0 0 chr13 36198230 36198267 -84086045 + (T)n Simple_repeat Simple_repeat 1 37 0 3 861 1012 79 50 0 chr13 36198267 36198406 -84085906 - B1_Mus2 SINE Alu 0 147 2 3 861 252 348 0 0 chr13 36198669 36198758 -84085554 + MER2B DNA MER2_type 242 330 -6 3 861 302 167 0 0 chr13 36199453 36199501 -84084811 - tRNA-Ala-GCY_ tRNA tRNA -26 49 2 3 861 248 226 19 0 chr13 36199454 36199507 -84084805 - ID4 SINE ID -29 54 1 3 861 894 256 40 31 chr13 36199857 36200054 -84084258 + B4A SINE B4 2 203 -89 3 861 818 91 0 8 chr13 36200054 36200176 -84084136 + (GGAGA)n Simple_repeat Simple_repeat 1 121 0 3 861 894 256 40 31 chr13 36200176 36200204 -84084108 + B4A SINE B4 204 229 -63 3 861 731 161 0 42 chr13 36200199 36200342 -84083970 + B1_Mur1 SINE Alu 11 147 -2 3 861 1931 191 55 17 chr13 36200750 36201154 -84083158 - MTD LTR MaLR 0 419 1 3 861 822 57 0 0 chr13 36202195 36202301 -84082011 + B1_Mm SINE Alu 31 136 -11 3 861 591 15 0 0 chr13 36202301 36202369 -84081943 + (GA)n Simple_repeat Simple_repeat 1 68 0 3 861 252 0 0 0 chr13 36203226 36203254 -84081058 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 3 861 666 261 24 66 chr13 36203284 36203497 -84080815 - ID_B1 SINE B4 -19 205 2 3 861 208 108 0 51 chr13 36204699 36204738 -84079574 + (CAGA)n Simple_repeat Simple_repeat 4 40 0 3 861 896 269 33 14 chr13 36204844 36205119 -84079193 - B4A SINE B4 -10 282 3 3 861 1926 157 78 6 chr13 36206098 36206258 -84078054 + ORR1C2 LTR MaLR 1 187 -197 3 861 396 0 0 0 chr13 36206258 36206302 -84078010 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 861 1926 157 78 6 chr13 36206302 36206499 -84077813 + ORR1C2 LTR MaLR 188 383 -1 3 861 207 0 0 0 chr13 36208006 36208029 -84076283 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 861 429 193 27 9 chr13 36208032 36208142 -84076170 - PB1D9 SINE Alu 0 120 9 3 861 216 0 0 0 chr13 36209140 36209164 -84075148 + (A)n Simple_repeat Simple_repeat 1 24 0 3 861 249 183 0 0 chr13 36209983 36210043 -84074269 + T-rich Low_complexity Low_complexity 1 60 0 3 861 342 231 127 3 chr13 36210047 36210145 -84074167 - PB1D7 SINE Alu -7 113 8 3 861 27 29 0 0 chr13 36210748 36210782 -84073530 + AT_rich Low_complexity Low_complexity 1 34 0 3 861 340 230 0 0 chr13 36211683 36211757 -84072555 - B1_Mus2 SINE Alu -35 112 39 3 861 277 260 0 0 chr13 36212298 36212371 -84071941 + CT-rich Low_complexity Low_complexity 1 73 0 3 861 714 136 10 32 chr13 36212371 36212521 -84071791 - B1_Mus2 SINE Alu 0 148 1 3 861 471 276 17 0 chr13 36212570 36212686 -84071626 - RSINE1 SINE B4 -19 146 29 3 861 321 26 0 0 chr13 36212687 36212725 -84071587 + (T)n Simple_repeat Simple_repeat 1 38 0 3 861 249 159 0 0 chr13 36212925 36212969 -84071343 + G-rich Low_complexity Low_complexity 6 49 0 3 861 284 175 0 16 chr13 36212988 36213052 -84071260 + G-rich Low_complexity Low_complexity 2 64 0 3 861 225 94 0 0 chr13 36213054 36213086 -84071226 + (T)n Simple_repeat Simple_repeat 1 32 0 3 861 1170 62 0 0 chr13 36213086 36213232 -84071080 - B1_Mus2 SINE Alu 0 147 2 3 861 757 119 16 41 chr13 36213352 36213363 -84070949 - PB1D9 SINE Alu 0 120 113 3 861 189 0 0 0 chr13 36213363 36213384 -84070928 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 3 861 757 119 16 41 chr13 36213384 36213495 -84070817 - PB1D9 SINE Alu -8 112 1 3 861 1276 170 32 12 chr13 36214676 36214926 -84069386 - MTC LTR MaLR -8 413 159 3 861 348 255 0 151 chr13 36216321 36216393 -84067919 - MTC LTR MaLR -218 141 91 3 861 1382 87 10 10 chr13 36216393 36216601 -84067711 - L1_Mus3 LINE L1 -2 6636 6429 3 861 348 255 0 151 chr13 36216601 36216694 -84067618 - MTC LTR MaLR -269 90 1 3 861 196 269 250 22 chr13 36217533 36217651 -84066661 + L2b LINE L2 3257 3386 -1 3 861 814 86 99 14 chr13 36217761 36217902 -84066410 + B2_Mm2 SINE B2 38 190 -5 3 861 236 303 13 0 chr13 36218638 36218714 -84065598 - LTR84b LTR ERVL -683 78 2 3 861 198 0 0 0 chr13 36218955 36218977 -84065335 + (T)n Simple_repeat Simple_repeat 1 22 0 3 861 539 174 8 17 chr13 36219340 36219457 -84064855 + B1_Mur4 SINE Alu 35 150 0 3 861 848 270 118 3 chr13 36220632 36220962 -84063350 - MTE2b LTR MaLR -7 372 5 3 861 246 368 64 29 chr13 36223273 36223413 -84060899 - MIRc SINE MIR -121 147 3 3 861 1151 197 236 3 chr13 36224258 36224381 -84059931 + ORR1C2 LTR MaLR 3 169 -215 3 861 1359 50 0 0 chr13 36224381 36224561 -84059751 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 861 1151 197 236 3 chr13 36224561 36224747 -84059565 + ORR1C2 LTR MaLR 170 383 -1 3 861 21 57 0 0 chr13 36224749 36224784 -84059528 + AT_rich Low_complexity Low_complexity 1 35 0 3 861 278 401 53 8 chr13 36225443 36225576 -84058736 + B1F2 SINE Alu 2 140 -9 3 861 223 164 52 52 chr13 36225610 36225668 -84058644 + ID4_ SINE ID 1 58 -25 3 861 378 359 22 26 chr13 36225723 36225952 -84058360 + Tigger5 DNA MER2_type 13 240 -2166 3 861 856 257 86 79 chr13 36226004 36226295 -84058017 - MTEa LTR MaLR -2 377 85 3 861 865 147 108 0 chr13 36227291 36227448 -84056864 + URR1B DNA MER1_type 46 219 -6 3 861 319 158 105 0 chr13 36228250 36228307 -84056005 - MLT2B4 LTR ERVL -95 461 399 3 861 397 304 113 22 chr13 36229331 36229516 -84054796 + MER3 DNA MER1_type 7 208 -1 3 861 331 273 77 54 chr13 36230239 36230460 -84053852 - L1MB4 LINE L1 -1 6179 5954 4 861 195 129 0 0 chr13 36231869 36231900 -84052412 + (T)n Simple_repeat Simple_repeat 1 31 0 4 861 342 280 24 16 chr13 36231905 36232032 -84052280 - L1MC LINE L1 -2181 5701 5574 4 861 1214 274 150 22 chr13 36232710 36233575 -84050737 - Lx7 LINE L1 -1611 6085 5083 4 861 209 211 0 17 chr13 36233678 36233736 -84050576 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 861 357 24 0 0 chr13 36233750 36233792 -84050520 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 861 537 260 31 43 chr13 36234327 36234488 -84049824 - RSINE1 SINE B4 -4 161 3 4 861 214 340 29 39 chr13 36234879 36234983 -84049329 - L2c LINE L2 -13 3374 3272 4 861 207 366 127 12 chr13 36235261 36235427 -84048885 - L2c LINE L2 -567 2852 2668 4 861 2603 252 90 35 chr13 36235820 36236741 -84047571 + RCHARR1 DNA MER1_type 3 974 0 4 861 31 0 0 0 chr13 36237057 36237088 -84047224 + AT_rich Low_complexity Low_complexity 1 31 0 4 861 315 0 0 0 chr13 36237513 36237548 -84046764 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 861 1841 211 223 6 chr13 36237805 36238307 -84046005 + RMER19C LTR ERVK 1 611 0 4 861 352 263 16 63 chr13 36238707 36238833 -84045479 - Lx6 LINE L1 -1379 6081 5962 4 861 1326 299 94 7 chr13 36239700 36240303 -84044009 - L1MB3 LINE L1 -12 6171 5516 4 861 21 36 0 0 chr13 36240644 36240672 -84043640 + AT_rich Low_complexity Low_complexity 1 28 0 4 861 1370 216 209 71 chr13 36241739 36242202 -84042110 - MT2A LTR ERVL -6 527 1 4 861 314 238 262 0 chr13 36242590 36242674 -84041638 + PB1D10 SINE Alu 5 110 -7 4 861 443 328 60 15 chr13 36242904 36243105 -84041207 - MER2 DNA MER2_type -43 302 93 4 861 28 0 0 0 chr13 36243682 36243710 -84040602 + AT_rich Low_complexity Low_complexity 1 28 0 4 861 254 315 14 0 chr13 36243829 36243902 -84040410 + C-rich Low_complexity Low_complexity 1 74 0 4 861 432 302 78 0 chr13 36243904 36244033 -84040279 - B1F1 SINE Alu -6 143 5 4 861 194 171 57 0 chr13 36245416 36245451 -84038861 - MIRc SINE MIR -144 124 88 4 861 269 26 26 0 chr13 36245744 36245782 -84038530 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 861 21 0 0 0 chr13 36246384 36246405 -84037907 + AT_rich Low_complexity Low_complexity 1 21 0 4 861 697 252 28 6 chr13 36246566 36246747 -84037565 + B3 SINE B2 1 195 0 4 861 561 287 128 0 chr13 36246747 36246942 -84037370 + MTD LTR MaLR 199 418 -1 4 861 214 194 0 0 chr13 36247080 36247116 -84037196 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 861 421 383 7 0 chr13 36247303 36247452 -84036860 + RSINE1 SINE B4 3 152 -13 4 861 1031 178 43 5 chr13 36248081 36248282 -84036030 + ORR1D1 LTR MaLR 3 192 -182 4 861 374 321 62 31 chr13 36250256 36250417 -84033895 + ORR1E LTR MaLR 1 166 -193 4 861 1063 218 14 36 chr13 36250968 36251187 -84033125 - B3 SINE B2 0 216 3 4 861 273 270 114 38 chr13 36251204 36251362 -84032950 - Lx8 LINE L1 -5 7468 7299 4 861 351 0 0 0 chr13 36251362 36251401 -84032911 + (TCCA)n Simple_repeat Simple_repeat 3 41 0 4 861 587 212 82 22 chr13 36251401 36251536 -84032776 - B1_Mur3 SINE Alu -5 144 2 4 861 621 0 0 0 chr13 36251543 36251612 -84032700 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 4 861 293 317 38 9 chr13 36251874 36251979 -84032333 - MER5B DNA MER1_type -48 130 23 4 861 614 285 62 27 chr13 36252924 36253180 -84031132 - MLT1A0 LTR MaLR -53 312 48 4 861 1099 219 14 18 chr13 36257059 36257282 -84027030 - ID_B1 SINE B4 0 224 3 4 861 766 282 106 7 chr13 36257380 36257662 -84026650 + Lx9 LINE L1 7055 7364 -280 4 861 1766 172 146 8 chr13 36257665 36258035 -84026277 - MTC LTR MaLR 0 421 1 4 861 279 328 76 29 chr13 36258037 36258131 -84026181 + Lx8 LINE L1 7252 7341 -132 4 861 477 0 0 0 chr13 36258131 36258184 -84026128 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 861 279 328 76 29 chr13 36258184 36258299 -84026013 + Lx8 LINE L1 7342 7470 -3 4 861 300 27 0 0 chr13 36259200 36259237 -84025075 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 861 337 328 117 44 chr13 36259430 36259567 -84024745 - RSINE1 SINE B4 0 165 19 4 861 1280 54 0 0 chr13 36259921 36260068 -84024244 + B1_Mus1 SINE Alu 1 147 -1 4 861 22 0 0 0 chr13 36260723 36260745 -84023567 + GC_rich Low_complexity Low_complexity 1 22 0 4 861 531 0 0 0 chr13 36261525 36261584 -84022728 + (CAAAC)n Simple_repeat Simple_repeat 2 60 0 4 861 5318 50 5 31 chr13 36262006 36262660 -84021652 - L1Md_F2 LINE L1 -13 6569 5933 4 861 585 234 8 61 chr13 36262852 36262984 -84021328 - B1_Mur1 SINE Alu -23 126 2 4 861 312 27 0 0 chr13 36263481 36263518 -84020794 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 861 387 0 0 0 chr13 36263518 36263560 -84020752 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 861 4926 122 46 11 chr13 36264515 36265297 -84019015 - RMER17D2 LTR ERVK 0 809 1 4 861 23 0 0 0 chr13 36265519 36265542 -84018770 + AT_rich Low_complexity Low_complexity 1 23 0 4 861 355 310 54 20 chr13 36265847 36265995 -84018317 - MTEa LTR MaLR 0 379 227 4 861 432 330 66 18 chr13 36266446 36266674 -84017638 - MLT1E3 LTR MaLR -8 616 378 4 861 354 305 166 12 chr13 36266715 36266884 -84017428 + ID_B1 SINE B4 2 196 -28 4 861 478 279 43 29 chr13 36268101 36268241 -84016071 - ID_B1 SINE B4 0 224 83 4 861 638 232 84 14 chr13 36268552 36268757 -84015555 + L1_Mur3 LINE L1 4054 4258 -1622 4 861 326 159 14 0 chr13 36268759 36268828 -84015484 + CT-rich Low_complexity Low_complexity 2 71 0 4 861 767 281 58 16 chr13 36268859 36269101 -84015211 - Lx8 LINE L1 -238 7235 6984 4 861 1520 305 35 4 chr13 36269306 36269406 -84014906 - Lx8 LINE L1 -514 6959 6850 4 861 225 0 0 0 chr13 36269406 36269431 -84014881 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 861 1520 305 35 4 chr13 36269431 36269840 -84014472 - Lx8 LINE L1 -624 6849 6434 4 861 448 178 58 3 chr13 36269834 36269945 -84014367 - L1_Mur3 LINE L1 -2541 3599 3473 4 861 613 205 54 54 chr13 36269945 36270074 -84014238 + B1_Mus1 SINE Alu 7 135 -13 4 861 570 29 0 0 chr13 36270075 36270143 -84014169 + (GA)n Simple_repeat Simple_repeat 1 68 0 4 861 2852 247 87 20 chr13 36270158 36271149 -84013163 - L1_Mur3 LINE L1 -2448 3432 2376 4 861 408 311 0 19 chr13 36271988 36272093 -84012219 - PB1D7 SINE Alu -17 103 1 4 861 261 176 39 0 chr13 36272697 36272748 -84011564 + MLT1A1 LTR MaLR 356 408 0 4 861 411 232 22 34 chr13 36273512 36273601 -84010711 + PB1D10 SINE Alu 10 97 -20 4 861 186 71 0 0 chr13 36274079 36274107 -84010205 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 4 861 1269 62 0 0 chr13 36274109 36274255 -84010057 - B1_Mm SINE Alu 0 147 2 4 861 306 275 119 29 chr13 36274267 36274477 -84009835 - L1ME2z LINE L1 -189 6255 6027 4 861 197 128 0 21 chr13 36274488 36274536 -84009776 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 4 861 23 33 0 0 chr13 36276020 36276050 -84008262 + AT_rich Low_complexity Low_complexity 1 30 0 4 861 35194 26 2 8 chr13 36276169 36281334 -84002978 + L1Md_T LINE L1 457 5586 -297 4 861 8376 34 1 4 chr13 36281334 36282331 -84001981 + L1Md_T LINE L1 5587 6580 -2 4 861 739 288 168 38 chr13 36282526 36282949 -84001363 - MER82 DNA MER2_type -101 552 75 4 861 195 42 0 0 chr13 36283522 36283546 -84000766 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 861 279 284 44 0 chr13 36283695 36283788 -84000524 - PB1D10 SINE Alu -14 103 7 4 861 207 0 0 0 chr13 36284700 36284723 -83999589 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 861 198 0 0 0 chr13 36284742 36284764 -83999548 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 861 2004 122 188 2 chr13 36285989 36286084 -83998228 - RMER4A LTR ERVK 0 466 368 4 861 516 45 0 0 chr13 36286084 36286151 -83998161 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 861 2004 122 188 2 chr13 36286151 36286448 -83997864 - RMER4A LTR ERVK -99 367 3 4 861 838 221 53 0 chr13 36287129 36287319 -83996993 - B3 SINE B2 -16 200 1 4 861 243 0 0 0 chr13 36287321 36287348 -83996964 + (T)n Simple_repeat Simple_repeat 1 27 0 4 861 1297 193 243 3 chr13 36287561 36287899 -83996413 - MTD LTR MaLR 0 419 1 4 861 21 0 0 0 chr13 36287940 36287961 -83996351 + AT_rich Low_complexity Low_complexity 1 21 0 4 861 303 154 0 0 chr13 36288449 36288514 -83995798 + CT-rich Low_complexity Low_complexity 1 65 0 4 861 510 105 12 0 chr13 36289247 36289333 -83994979 + Lx LINE L1 6553 6639 -15 4 861 483 318 36 16 chr13 36290876 36291068 -83993244 + B3A SINE B2 2 197 -1 4 861 339 258 20 70 chr13 36291260 36291360 -83992952 - PB1D7 SINE Alu -8 112 18 4 861 1129 30 0 0 chr13 36291569 36291700 -83992612 + B1_Mus1 SINE Alu 2 132 -16 4 861 259 321 37 0 chr13 36291702 36291783 -83992529 + ID_B1 SINE B4 128 211 -13 4 861 388 0 0 37 chr13 36291783 36291837 -83992475 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 4 861 1184 68 0 0 chr13 36291853 36292000 -83992312 + B1_Mus2 SINE Alu 1 147 0 4 861 2038 173 35 3 chr13 36292225 36292596 -83991716 - ORR1C2 LTR MaLR 0 384 2 4 861 265 202 67 56 chr13 36292782 36292871 -83991441 - PB1D10 SINE Alu 0 117 28 4 861 570 242 42 0 chr13 36293008 36293128 -83991184 - B3A SINE B2 -73 125 1 4 861 473 324 29 0 chr13 36293198 36293337 -83990975 - RSINE1 SINE B4 -21 144 2 4 861 364 256 35 0 chr13 36294913 36294999 -83989313 - B4 SINE B4 -6 286 198 4 861 561 299 28 132 chr13 36294980 36295269 -83989043 - B4A SINE B4 -33 259 1 4 861 1333 37 0 0 chr13 36295270 36295432 -83988880 + L1Md_T LINE L1 6419 6580 -2 4 861 203 133 0 0 chr13 36295591 36295621 -83988691 + (G)n Simple_repeat Simple_repeat 1 30 0 4 861 224 104 0 40 chr13 36295776 36295826 -83988486 + (TTAA)n Simple_repeat Simple_repeat 1 48 0 4 861 717 230 7 7 chr13 36295828 36295968 -83988344 - B1_Mur1 SINE Alu -9 140 1 5 861 378 0 0 0 chr13 36297507 36297549 -83986763 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 861 253 273 50 50 chr13 36297686 36297745 -83986567 + B4A SINE B4 34 132 -92 5 861 270 236 18 0 chr13 36297745 36297800 -83986512 + B1F2 SINE Alu 3 58 -91 5 861 380 246 6 0 chr13 36297828 36298003 -83986309 + GA-rich Low_complexity Low_complexity 2 177 0 5 861 624 86 0 127 chr13 36297962 36298375 -83985937 + (CAGAGA)n Simple_repeat Simple_repeat 1 360 0 5 861 304 256 90 0 chr13 36298399 36298477 -83985835 + PB1 SINE Alu 41 125 -2 5 861 185 317 17 0 chr13 36299490 36299550 -83984762 - MIR SINE MIR -112 96 36 5 861 409 252 47 0 chr13 36299898 36300005 -83984307 + PB1D9 SINE Alu 2 113 -7 5 861 3729 241 80 8 chr13 36300928 36301850 -83982462 + RMER1A Other Other 41 1029 -1 5 861 358 245 10 170 chr13 36302755 36302989 -83981323 + L1M5 LINE L1 3844 4047 -2099 5 861 614 299 23 6 chr13 36303148 36303323 -83980989 + B3A SINE B2 3 180 -18 5 861 388 336 35 39 chr13 36303368 36303597 -83980715 + L1M5 LINE L1 4163 4390 -1756 5 861 216 0 0 0 chr13 36306037 36306061 -83978251 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 862 1148 272 32 44 chr13 36308035 36308446 -83975866 + Lx6 LINE L1 6995 7400 -60 5 862 546 309 36 6 chr13 36308450 36308616 -83975696 - LTR41 LTR ERVL -595 173 3 5 862 392 323 131 28 chr13 36308860 36309150 -83975162 - Charlie20a DNA Charlie -155 652 333 5 862 489 209 136 23 chr13 36309288 36309464 -83974848 - Lx7 LINE L1 -16 7680 7485 5 862 227 261 107 0 chr13 36309710 36309793 -83974519 + MIRc SINE MIR 90 186 -90 5 862 352 205 48 16 chr13 36312942 36313066 -83971246 - L1MC3 LINE L1 -16 7769 7642 5 862 226 354 18 0 chr13 36313407 36313520 -83970792 - PB1 SINE Alu -8 119 5 5 862 38 22 0 0 chr13 36315070 36315115 -83969197 + AT_rich Low_complexity Low_complexity 1 45 0 5 862 338 293 16 10 chr13 36315253 36315353 -83968959 - PB1D10 SINE Alu -21 128 31 5 862 248 330 89 40 chr13 36316249 36316350 -83967962 - B1_Mur4 SINE Alu -34 116 11 5 862 529 309 93 7 chr13 36316272 36316422 -83967890 - B4 SINE B4 -120 172 10 5 862 603 273 69 81 chr13 36316591 36316973 -83967339 - RLTR26 LTR ERVK -225 417 1 5 862 219 36 0 0 chr13 36316989 36317017 -83967295 + (TAA)n Simple_repeat Simple_repeat 1 28 0 5 862 261 223 231 30 chr13 36317218 36317352 -83966960 + MIRb SINE MIR 49 209 -59 5 862 231 114 0 0 chr13 36317671 36317706 -83966606 + (TCC)n Simple_repeat Simple_repeat 2 36 0 5 862 204 40 0 0 chr13 36319057 36319082 -83965230 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 862 1417 273 70 38 chr13 36319301 36319990 -83964322 + L1_Rod LINE L1 5137 5847 0 5 862 464 302 56 20 chr13 36320520 36320716 -83963596 - B3 SINE B2 -13 203 1 5 862 318 67 0 0 chr13 36321257 36321302 -83963010 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 862 808 208 19 0 chr13 36321305 36321464 -83962848 - B3 SINE B2 -54 162 1 5 862 272 274 109 36 chr13 36321618 36321728 -83962584 + PB1D7 SINE Alu 2 119 -1 5 862 240 35 0 0 chr13 36321792 36321821 -83962491 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 862 245 255 0 0 chr13 36322028 36322079 -83962233 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 862 586 272 77 16 chr13 36322672 36322974 -83961338 + L1MC2 LINE L1 5823 6137 -196 5 862 191 61 30 0 chr13 36323094 36323127 -83961185 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 862 940 146 216 0 chr13 36323432 36323617 -83960695 - URR1A DNA MER1_type -1 225 1 5 862 234 0 0 0 chr13 36325425 36325451 -83958861 + (T)n Simple_repeat Simple_repeat 1 26 0 5 862 212 283 19 0 chr13 36325912 36325965 -83958347 + L2a LINE L2 3340 3393 -33 5 862 225 94 0 0 chr13 36326873 36326905 -83957407 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 5 862 382 297 61 30 chr13 36327082 36327214 -83957098 + RSINE1 SINE B4 13 148 -17 5 862 650 245 14 0 chr13 36327613 36327752 -83956560 - B1_Mur1 SINE Alu -7 142 2 5 862 288 262 98 24 chr13 36328158 36328240 -83956072 + PB1D10 SINE Alu 18 105 -12 5 862 279 140 0 0 chr13 36328249 36328299 -83956013 + (TCCC)n Simple_repeat Simple_repeat 3 52 0 5 862 1030 292 57 25 chr13 36329765 36330081 -83954231 - ORR1E LTR MaLR -6 353 28 5 862 1031 158 114 38 chr13 36330081 36330291 -83954021 - URR1A DNA MER1_type 0 226 1 5 862 572 285 124 24 chr13 36330594 36330964 -83953348 - L1MEc LINE L1 -5207 1193 787 5 862 382 306 78 63 chr13 36330990 36331450 -83952862 - L1MEc LINE L1 -5685 715 249 5 862 310 326 69 8 chr13 36331530 36331660 -83952652 + MER2 DNA MER2_type 3 140 -205 5 862 244 335 22 125 chr13 36332214 36332398 -83951914 + MIRb SINE MIR 90 254 -14 5 862 21 0 0 0 chr13 36334208 36334229 -83950083 + AT_rich Low_complexity Low_complexity 1 21 0 5 862 213 94 0 0 chr13 36334437 36334469 -83949843 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 5 862 594 307 13 0 chr13 36334473 36334623 -83949689 - RSINE1 SINE B4 -11 154 3 5 862 1659 141 28 106 chr13 36336626 36336983 -83947329 - ORR1A4 LTR MaLR 0 329 1 5 862 21 36 0 0 chr13 36337158 36337186 -83947126 + AT_rich Low_complexity Low_complexity 1 28 0 5 862 1013 89 6 6 chr13 36337729 36337887 -83946425 + B2_Mm2 SINE B2 1 158 -37 5 862 498 292 76 18 chr13 36339054 36339225 -83945087 + ID_B1 SINE B4 35 215 -9 5 862 25 0 0 0 chr13 36339635 36339660 -83944652 + AT_rich Low_complexity Low_complexity 1 25 0 5 862 1217 48 0 0 chr13 36339662 36339809 -83944503 - B1_Mus2 SINE Alu 0 147 1 5 862 1692 16 0 0 chr13 36340065 36340252 -83944060 + L1Md_A LINE L1 5400 5586 -297 5 862 8603 30 2 0 chr13 36340252 36341246 -83943066 + L1Md_A LINE L1 5587 6582 0 5 862 1647 176 193 5 chr13 36342380 36342768 -83941544 + MT2A LTR ERVL 1 461 -72 5 862 465 66 0 0 chr13 36342768 36342829 -83941483 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 862 371 311 72 81 chr13 36342829 36342863 -83941449 + MT2A LTR ERVL 544 590 -11 5 862 309 267 120 15 chr13 36343538 36343671 -83940641 + ORR1E LTR MaLR 3 149 -210 5 862 318 238 80 87 chr13 36343873 36344149 -83940163 - L1ME1 LINE L1 -109 6070 5797 5 862 11774 73 8 43 chr13 36344171 36346009 -83938303 - RLTR22_Mus LTR ERVK -36 1772 1 5 862 237 342 38 12 chr13 36347160 36347320 -83936992 - L1MEf LINE L1 -4611 1589 1426 5 862 186 71 0 0 chr13 36347321 36347349 -83936963 + (T)n Simple_repeat Simple_repeat 1 28 0 5 862 23 0 0 0 chr13 36347605 36347628 -83936684 + AT_rich Low_complexity Low_complexity 1 23 0 5 862 765 253 5 41 chr13 36347628 36347822 -83936490 - B3 SINE B2 -20 196 10 5 862 339 165 23 12 chr13 36347844 36347930 -83936382 + CT-rich Low_complexity Low_complexity 3 89 0 5 862 275 275 116 37 chr13 36348350 36348565 -83935747 - L1ME1 LINE L1 -657 5583 5352 5 862 260 137 0 19 chr13 36348719 36348771 -83935541 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 862 212 0 36 0 chr13 36349806 36349834 -83934478 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 5 862 2176 97 15 59 chr13 36351549 36351890 -83932422 - ORR1A3 LTR MaLR 0 326 1 5 862 24 0 0 0 chr13 36352368 36352392 -83931920 + AT_rich Low_complexity Low_complexity 1 24 0 5 862 806 158 50 0 chr13 36352408 36352547 -83931765 + B1_Mus1 SINE Alu 2 147 -1 5 862 544 233 23 0 chr13 36352571 36352704 -83931608 - B3 SINE B2 -7 209 74 5 862 1072 188 77 111 chr13 36352699 36353160 -83931152 + RMER12 LTR ERVK 444 1259 -145 5 862 204 40 0 0 chr13 36353161 36353186 -83931126 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 5 862 348 64 0 0 chr13 36353197 36353244 -83931068 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 862 324 250 0 0 chr13 36355114 36355186 -83929126 - ID_B1 SINE B4 -1 223 152 5 862 226 286 88 0 chr13 36355121 36355212 -83929100 - B1F1 SINE Alu -8 141 43 5 862 196 350 72 0 chr13 36355420 36355517 -83928795 + L2b LINE L2 3272 3375 0 5 862 411 21 0 0 chr13 36356567 36356615 -83927697 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 862 1090 183 5 10 chr13 36361118 36361322 -83922990 - URR1B DNA MER1_type -15 210 8 5 862 257 326 10 0 chr13 36361728 36361826 -83922486 - HAL1 LINE L1 -593 1914 1816 5 862 186 103 0 0 chr13 36362340 36362369 -83921943 + (TCTG)n Simple_repeat Simple_repeat 1 29 0 5 862 1167 48 0 0 chr13 36362373 36362519 -83921793 + (TCTCCC)n Simple_repeat Simple_repeat 3 148 0 5 862 189 74 0 0 chr13 36362519 36362546 -83921766 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 862 572 239 148 33 chr13 36362838 36362999 -83921313 + B3 SINE B2 4 186 -30 5 862 537 80 0 0 chr13 36362999 36363074 -83921238 + (CATA)n Simple_repeat Simple_repeat 4 78 0 5 862 572 239 148 33 chr13 36363074 36363094 -83921218 + B3 SINE B2 187 206 -10 5 862 758 311 112 20 chr13 36363113 36363941 -83920371 - L1MB8 LINE L1 -55 6123 5222 5 862 290 299 27 128 chr13 36364090 36364347 -83919965 - L1MB8 LINE L1 -1380 4766 4536 5 862 24 32 0 0 chr13 36366998 36367029 -83917283 + AT_rich Low_complexity Low_complexity 1 31 0 5 862 261 83 0 0 chr13 36367067 36367103 -83917209 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 862 753 248 50 18 chr13 36367111 36367329 -83916983 + B4 SINE B4 3 227 -65 5 862 509 253 151 31 chr13 36367330 36367522 -83916790 + B3 SINE B2 2 216 0 5 862 266 258 42 21 chr13 36367794 36367889 -83916423 - PB1 SINE Alu -11 116 20 5 862 662 0 13 0 chr13 36369297 36369375 -83914937 + (TCCC)n Simple_repeat Simple_repeat 2 80 0 5 862 459 101 0 0 chr13 36369394 36369473 -83914839 + (TC)n Simple_repeat Simple_repeat 2 80 0 5 862 2915 149 85 31 chr13 36369499 36370108 -83914204 + RLTR26 LTR ERVK 1 642 0 5 862 260 290 0 0 chr13 36370124 36370186 -83914126 + MurSatRep1 Unknown Unknown 221 282 -1855 6 862 235 387 57 0 chr13 36370315 36370421 -83913891 - RSINE1 SINE B4 0 165 54 6 862 185 333 35 26 chr13 36370591 36370705 -83913607 + MIR SINE MIR 102 216 -46 6 862 206 229 0 0 chr13 36370734 36370782 -83913530 + (CAT)n Simple_repeat Simple_repeat 2 49 0 6 862 744 258 33 9 chr13 36372887 36373098 -83911214 - B3 SINE B2 0 216 1 6 862 231 36 0 0 chr13 36373107 36373135 -83911177 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 6 862 291 246 200 17 chr13 36373135 36373247 -83911065 - B1_Mur1 SINE Alu -13 136 2 6 862 220 40 0 138 chr13 36377735 36377793 -83906519 + (TTAAG)n Simple_repeat Simple_repeat 4 53 0 6 862 247 301 39 10 chr13 36377822 36377926 -83906386 + MLT1L LTR MaLR 213 319 -291 6 862 307 321 0 13 chr13 36378858 36378937 -83905375 + PB1D10 SINE Alu 11 88 -29 6 862 298 282 0 0 chr13 36378999 36379077 -83905235 + ID4_ SINE ID 5 82 -1 6 862 21 0 0 0 chr13 36381136 36381157 -83903155 + AT_rich Low_complexity Low_complexity 1 21 0 6 862 360 306 108 17 chr13 36382242 36382418 -83901894 + MTD LTR MaLR 42 233 -186 6 862 335 243 102 9 chr13 36382429 36382537 -83901775 + MTD LTR MaLR 275 392 -27 6 862 572 284 19 0 chr13 36382609 36382771 -83901541 + Tigger7 DNA MER2_type 2327 2491 0 6 862 7680 29 0 1 chr13 36382829 36383714 -83900598 + L1Md_T LINE L1 5699 6582 0 6 862 1010 319 55 18 chr13 36383826 36384263 -83900049 + L3 LINE CR1 3356 3808 -681 6 862 309 29 0 0 chr13 36384772 36384807 -83899505 - L1Md_F2 LINE L1 -415 6167 6133 6 862 3157 70 0 16 chr13 36384807 36385230 -83899082 + L1Md_F2 LINE L1 6167 6582 0 6 862 315 0 0 0 chr13 36385258 36385293 -83899019 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 862 309 26 0 0 chr13 36385293 36385330 -83898982 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 862 375 130 0 0 chr13 36387513 36387590 -83896722 + (TCTG)n Simple_repeat Simple_repeat 4 80 0 6 862 333 194 232 10 chr13 36387598 36387697 -83896615 - B3A SINE B2 -70 128 8 6 862 349 311 73 6 chr13 36387787 36387965 -83896347 - MER3 DNA MER1_type 0 209 20 6 862 255 293 73 29 chr13 36387999 36388136 -83896176 + MIRb SINE MIR 58 200 -68 6 862 315 0 0 0 chr13 36388826 36388861 -83895451 + (TAA)n Simple_repeat Simple_repeat 3 37 0 6 862 1134 249 99 12 chr13 36388908 36389241 -83895071 + MTD LTR MaLR 46 407 -12 6 862 495 0 0 0 chr13 36391145 36391200 -83893112 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 862 294 29 0 0 chr13 36391200 36391234 -83893078 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 862 487 125 6 0 chr13 36391420 36391513 -83892799 + L1_Mm LINE L1 2068 2165 -3721 6 862 345 322 58 37 chr13 36391927 36392117 -83892195 - L1ME2 LINE L1 -298 5866 5673 6 862 6095 35 0 3 chr13 36392791 36393471 -83890841 + L1Md_T LINE L1 5905 6582 0 6 862 191 333 41 66 chr13 36394200 36394322 -83889990 - L2c LINE L2 -203 3184 3066 6 862 230 268 18 0 chr13 36394976 36395032 -83889280 + Tigger7 DNA MER2_type 89 145 -2346 6 862 551 276 88 5 chr13 36395037 36395230 -83889082 + Tigger7 DNA MER2_type 2280 2488 -3 6 862 200 388 30 6 chr13 36395508 36395674 -83888638 + MIR SINE MIR 76 245 -17 6 862 186 43 0 0 chr13 36396773 36396796 -83887516 + (TCCC)n Simple_repeat Simple_repeat 4 26 0 6 862 474 280 80 0 chr13 36397721 36397846 -83886466 + B1F SINE Alu 5 139 -10 6 862 210 37 0 0 chr13 36397846 36397873 -83886439 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 862 226 336 35 35 chr13 36398287 36398401 -83885911 - MLT1B LTR MaLR -109 281 168 6 862 22 35 0 0 chr13 36401906 36401935 -83882377 + AT_rich Low_complexity Low_complexity 1 29 0 6 862 234 62 0 0 chr13 36403568 36403600 -83880712 + (TGAG)n Simple_repeat Simple_repeat 1 32 0 6 862 934 181 11 47 chr13 36404802 36404993 -83879319 + B2_Mm2 SINE B2 3 186 -9 6 862 678 287 5 41 chr13 36405130 36405326 -83878986 - B3A SINE B2 -8 190 2 6 862 233 333 37 19 chr13 36405557 36405664 -83878648 - B4A SINE B4 0 292 184 6 862 814 238 84 5 chr13 36408343 36408533 -83875779 + B3 SINE B2 5 209 -7 6 862 272 276 101 101 chr13 36409831 36409960 -83874352 - MLT1J1 LTR MaLR 0 444 316 6 862 550 307 120 24 chr13 36411982 36412232 -83872080 - MTEb LTR MaLR 0 379 106 6 862 1390 212 20 3 chr13 36412230 36412523 -83871789 + ORR1D1-int LTR MaLR 1072 1369 -1 6 862 814 167 173 19 chr13 36412528 36412742 -83871570 + ORR1D1 LTR MaLR 4 250 -124 6 862 243 103 0 0 chr13 36412765 36412804 -83871508 + ORR1D1 LTR MaLR 334 372 -2 6 862 495 69 0 0 chr13 36413441 36413513 -83870799 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 862 379 256 0 35 chr13 36413521 36413606 -83870706 - RSINE1 SINE B4 -43 122 41 6 862 453 229 122 8 chr13 36413653 36413776 -83870536 + B1F SINE Alu 5 141 -8 6 862 21 57 0 0 chr13 36414286 36414321 -83869991 + AT_rich Low_complexity Low_complexity 1 35 0 6 862 2611 84 83 18 chr13 36415326 36415712 -83868600 + RLTR10A LTR ERVK 1 411 0 6 862 264 186 33 33 chr13 36415792 36415853 -83868459 - MLT1I LTR MaLR -5 406 346 6 862 243 0 0 0 chr13 36417081 36417108 -83867204 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 6 862 436 291 96 48 chr13 36417758 36417997 -83866315 - L1MD1 LINE L1 -369 5990 5742 6 862 4480 120 48 11 chr13 36419432 36420099 -83864213 - Lx2 LINE L1 0 6997 6306 6 862 409 280 0 78 chr13 36420530 36420646 -83863666 + PB1D7 SINE Alu 6 112 -8 6 862 832 256 55 36 chr13 36420651 36420870 -83863442 + ID_B1 SINE B4 2 224 0 6 862 185 268 55 27 chr13 36421663 36421736 -83862576 + MIRb SINE MIR 23 97 -171 6 862 401 277 17 26 chr13 36422093 36422208 -83862104 + MIRb SINE MIR 85 198 -70 6 862 229 336 16 66 chr13 36422426 36422547 -83861765 + MLT1H LTR MaLR 104 218 -331 6 862 287 305 65 19 chr13 36422792 36422946 -83861366 + L1MC4 LINE L1 7424 7584 -458 6 862 1293 21 0 0 chr13 36422985 36423125 -83861187 - B1_Mm SINE Alu -7 140 1 6 862 243 217 0 0 chr13 36424088 36424148 -83860164 + CT-rich Low_complexity Low_complexity 3 62 0 6 862 3431 45 8 2 chr13 36424628 36425026 -83859286 + MTB LTR MaLR 1 400 0 6 862 318 339 47 47 chr13 36426860 36426987 -83857325 + ID_B1 SINE B4 81 207 -17 6 862 252 0 0 0 chr13 36427000 36427028 -83857284 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 6 862 29 47 0 0 chr13 36427713 36427756 -83856556 + AT_rich Low_complexity Low_complexity 1 43 0 6 862 319 307 179 35 chr13 36427823 36428146 -83856166 - L1MB5 LINE L1 -122 6052 5686 6 862 456 217 156 0 chr13 36428342 36428490 -83855822 - L1M4 LINE L1 -2583 5459 5291 6 862 1949 271 76 14 chr13 36428777 36429465 -83854847 - L1M4 LINE L1 -1730 4416 3687 6 862 550 296 52 29 chr13 36429669 36429843 -83854469 - B3A SINE B2 -16 182 5 6 862 217 189 57 0 chr13 36430013 36430066 -83854246 + T-rich Low_complexity Low_complexity 2 57 0 6 862 273 351 92 60 chr13 36430617 36430932 -83853380 - L4 LINE RTE 0 2029 1705 6 862 351 0 0 0 chr13 36431236 36431275 -83853037 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 862 504 222 0 0 chr13 36431319 36431409 -83852903 - B3A SINE B2 -108 90 1 6 862 256 265 107 12 chr13 36431474 36431558 -83852754 - MLT1E3 LTR MaLR -171 453 362 6 862 1679 230 29 105 chr13 36432050 36432432 -83851880 - Lx7 LINE L1 0 7696 7343 6 862 666 0 0 0 chr13 36432432 36432506 -83851806 + (GAA)n Simple_repeat Simple_repeat 3 76 0 6 862 1679 230 29 105 chr13 36432506 36432711 -83851601 - Lx7 LINE L1 -354 7342 7154 6 862 1000 254 40 0 chr13 36432921 36433145 -83851167 + B4A SINE B4 1 233 -59 6 862 433 350 14 0 chr13 36433162 36433305 -83851007 + B3 SINE B2 41 185 -31 6 862 284 241 24 60 chr13 36433310 36433394 -83850918 + B3 SINE B2 136 216 0 6 862 270 210 0 147 chr13 36433404 36433499 -83850813 + B4A SINE B4 212 292 0 6 862 982 297 33 16 chr13 36434082 36434387 -83849925 + MTE2b LTR MaLR 11 320 -59 6 862 1941 319 52 12 chr13 36434660 36435430 -83848882 - Lx8 LINE L1 -374 7099 6299 6 862 524 307 5 64 chr13 36435460 36435648 -83848664 - Lx8 LINE L1 -1123 6350 6174 6 862 1071 244 115 27 chr13 36435676 36435971 -83848341 + MTD LTR MaLR 11 331 -88 6 862 263 354 0 12 chr13 36436005 36436088 -83848224 - MLT1D-int LTR MaLR -1406 83 2 6 862 294 313 81 118 chr13 36436283 36436387 -83847925 - MLT1D LTR MaLR -288 217 108 6 862 440 256 108 31 chr13 36436387 36436516 -83847796 - B1_Mur1 SINE Alu -9 140 2 6 862 294 313 81 118 chr13 36436516 36436632 -83847680 - MLT1D LTR MaLR -398 107 5 6 862 243 0 0 0 chr13 36437408 36437435 -83846877 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 862 273 192 0 0 chr13 36437957 36438009 -83846303 - MER5A1 DNA MER1_type -1 165 114 6 863 315 0 0 0 chr13 36438723 36438758 -83845554 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 863 380 226 24 0 chr13 36438796 36438880 -83845432 - RSINE1 SINE B4 -38 127 42 6 863 1969 248 93 24 chr13 36439808 36440479 -83843833 - Lx9 LINE L1 -171 7473 6723 6 863 978 252 29 0 chr13 36440739 36440945 -83843367 - B3 SINE B2 0 216 5 6 863 237 33 0 0 chr13 36441506 36441536 -83842776 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 863 256 388 0 0 chr13 36441615 36441713 -83842599 - RMER15 LTR ERVL -107 468 371 6 863 758 288 49 121 chr13 36444388 36445139 -83839173 - L1M5 LINE L1 -2116 4030 3334 6 863 264 21 61 20 chr13 36445199 36445248 -83839064 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 6 863 1208 69 0 0 chr13 36445248 36445392 -83838920 - B1_Mus2 SINE Alu -3 144 1 6 863 3997 72 0 38 chr13 36445594 36446099 -83838213 + L1_Mus1 LINE L1 6080 6565 -2 6 863 9957 20 0 0 chr13 36446143 36447280 -83837032 - L1_Mm LINE L1 -805 5078 3942 6 863 3842 66 0 0 chr13 36447280 36447736 -83836576 + L1Md_T LINE L1 6127 6582 0 6 863 23 0 0 0 chr13 36448619 36448642 -83835670 + AT_rich Low_complexity Low_complexity 1 23 0 6 863 556 303 94 26 chr13 36448806 36449145 -83835167 - L1MB3 LINE L1 -52 6131 5757 6 863 242 271 14 14 chr13 36450270 36450341 -83833971 - L2b LINE L2 -2 3373 3303 7 863 342 0 0 0 chr13 36451624 36451662 -83832650 + (T)n Simple_repeat Simple_repeat 1 38 0 7 863 234 176 0 0 chr13 36452121 36452172 -83832140 + GA-rich Low_complexity Low_complexity 1 51 0 7 863 233 259 140 18 chr13 36452390 36452504 -83831808 - LTR78 LTR ERV1 -819 485 358 7 863 21 0 0 0 chr13 36452882 36452903 -83831409 + AT_rich Low_complexity Low_complexity 1 21 0 7 863 270 56 0 0 chr13 36452978 36453014 -83831298 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 863 216 0 0 0 chr13 36453014 36453037 -83831275 + (CG)n Simple_repeat Simple_repeat 2 25 0 7 863 223 186 23 0 chr13 36454138 36454181 -83830131 + (CTG)n Simple_repeat Simple_repeat 2 45 0 7 863 496 267 34 2 chr13 36454755 36454877 -83829435 + B1_Mur1 SINE Alu 3 139 -10 7 863 726 12 0 0 chr13 36454878 36454961 -83829351 + (TAGA)n Simple_repeat Simple_repeat 3 85 0 7 863 450 0 0 0 chr13 36455047 36455097 -83829215 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 863 499 256 167 0 chr13 36455190 36455370 -83828942 - B3 SINE B2 -1 215 6 7 863 426 39 0 0 chr13 36455845 36455897 -83828415 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 863 266 288 34 48 chr13 36455986 36456132 -83828180 + MIR SINE MIR 118 261 -1 7 863 625 232 58 7 chr13 36457627 36457766 -83826546 + B3A SINE B2 1 146 -52 7 863 297 226 80 54 chr13 36457741 36457767 -83826545 + B3A SINE B2 68 93 -105 7 863 254 29 0 28 chr13 36457767 36457803 -83826509 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 863 297 226 80 54 chr13 36457803 36457888 -83826424 + B3A SINE B2 94 182 -16 7 863 400 62 0 30 chr13 36457913 36457979 -83826333 + (CATA)n Simple_repeat Simple_repeat 4 67 0 7 863 226 331 162 19 chr13 36458475 36458635 -83825677 - MIRm SINE MIR -24 252 70 7 863 210 258 9 99 chr13 36459330 36459462 -83824850 + MIRm SINE MIR 26 148 -128 7 863 617 239 7 35 chr13 36459621 36459764 -83824548 - B1_Mur2 SINE Alu -7 142 4 7 863 262 274 72 9 chr13 36459825 36459970 -83824342 - MIRc SINE MIR -79 189 33 7 863 1275 74 0 0 chr13 36460394 36460639 -83823673 + (TG)n Simple_repeat Simple_repeat 1 245 0 7 863 512 270 101 18 chr13 36461297 36461758 -83822554 - L1M3 LINE L1 -519 5778 5231 7 863 216 213 21 0 chr13 36461915 36461962 -83822350 + (TTCA)n Simple_repeat Simple_repeat 3 50 0 7 863 228 250 136 8 chr13 36462041 36462166 -83822146 - L1M3 LINE L1 -911 5229 5089 7 863 363 304 22 0 chr13 36462166 36462301 -83822011 + (CATA)n Simple_repeat Simple_repeat 4 141 0 7 863 1822 282 102 20 chr13 36462319 36463003 -83821309 - L1M3 LINE L1 -1092 5048 4294 7 863 1351 223 145 3 chr13 36463003 36463327 -83820985 + ORR1D2 LTR MaLR 1 370 0 7 863 1822 282 102 20 chr13 36463327 36463586 -83820726 - L1M3 LINE L1 -1847 4293 4028 7 863 220 153 0 63 chr13 36463800 36463828 -83820484 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 863 781 209 0 92 chr13 36463828 36463876 -83820436 - B1_Mur3 SINE Alu 0 149 111 7 863 219 69 0 0 chr13 36463876 36463905 -83820407 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 863 781 209 0 92 chr13 36463905 36464019 -83820293 - B1_Mur3 SINE Alu -39 110 2 7 863 220 153 0 63 chr13 36464019 36464053 -83820259 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 7 863 323 256 158 0 chr13 36464092 36464174 -83820138 - B3 SINE B2 -86 130 36 7 863 399 41 0 0 chr13 36464250 36464299 -83820013 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 863 816 306 29 0 chr13 36464406 36464615 -83819697 - B3 SINE B2 0 216 2 7 863 6814 43 2 0 chr13 36464641 36465623 -83818689 - L1Md_F2 LINE L1 -539 6043 5061 7 863 4992 56 0 7 chr13 36465623 36466214 -83818098 + L1Md_F2 LINE L1 5990 6576 -6 7 863 1002 89 81 7 chr13 36466228 36466364 -83817948 + B1_Mus2 SINE Alu 2 147 0 7 863 213 65 0 0 chr13 36466364 36466395 -83817917 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 863 28 29 0 0 chr13 36466546 36466581 -83817731 + AT_rich Low_complexity Low_complexity 1 35 0 7 863 522 240 367 0 chr13 36466592 36466742 -83817570 - B3 SINE B2 -11 205 1 7 863 1297 72 0 0 chr13 36467092 36467259 -83817053 - MTB LTR MaLR -52 348 182 7 863 8134 113 32 18 chr13 36467267 36468668 -83815644 - L1Md_F2 LINE L1 0 6582 5167 7 863 2321 153 29 3 chr13 36468668 36469049 -83815263 + Lx2 LINE L1 6606 6996 -1 7 863 6754 253 109 62 chr13 36469049 36469140 -83815172 - L1Md_F2 LINE L1 -717 5166 5048 7 863 234 0 0 0 chr13 36469140 36469166 -83815146 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 863 6754 253 109 62 chr13 36469166 36470926 -83813386 - L1Md_F2 LINE L1 -836 5047 3164 7 863 1463 85 0 0 chr13 36470926 36471102 -83813210 - B2_Mm2 SINE B2 -19 176 1 7 863 6754 253 109 62 chr13 36471102 36471294 -83813018 - L1Md_F2 LINE L1 -2720 3163 3009 7 863 656 225 39 8 chr13 36471294 36471424 -83812888 - B1_Mur2 SINE Alu -15 134 1 7 863 6754 253 109 62 chr13 36471424 36472322 -83811990 - L1Md_F2 LINE L1 -2875 3008 2065 7 863 2117 193 79 34 chr13 36472353 36472857 -83811455 + MT2A LTR ERVL 1 527 -6 7 863 626 322 62 17 chr13 36472909 36473329 -83810983 - L1_Rod LINE L1 -3849 1998 1560 7 863 311 323 21 10 chr13 36473315 36473509 -83810803 - L1_Rod LINE L1 -4403 1444 1249 7 863 4643 63 40 9 chr13 36473565 36474142 -83810170 - L1Md_F2 LINE L1 -2 6580 5986 7 863 370 322 33 0 chr13 36477107 36477197 -83807115 + B1F1 SINE Alu 6 98 -51 7 863 313 133 250 0 chr13 36477280 36477340 -83806972 - ID4 SINE ID -6 77 3 7 863 734 299 14 19 chr13 36477343 36477558 -83806754 + Tigger5 DNA MER2_type 94 307 -2099 7 863 336 217 207 9 chr13 36477560 36477676 -83806636 + Tigger5 DNA MER2_type 2186 2324 -82 7 863 362 310 103 14 chr13 36478389 36478602 -83805710 + MIR SINE MIR 12 243 -19 7 863 3329 58 18 0 chr13 36479315 36479708 -83804604 - MTB LTR MaLR 0 400 1 7 863 461 319 0 0 chr13 36480852 36480965 -83803347 + PB1D10 SINE Alu 5 117 0 7 863 1113 55 153 32 chr13 36481915 36482104 -83802208 + L1_Mus3 LINE L1 6427 6638 0 7 863 273 179 12 23 chr13 36482229 36482315 -83801997 + GA-rich Low_complexity Low_complexity 3 87 0 7 863 262 339 34 8 chr13 36483611 36483730 -83800582 + Tigger5 DNA MER2_type 2285 2406 0 7 863 284 350 67 82 chr13 36486348 36486753 -83797559 - MLT1A1 LTR MaLR -9 399 1 7 863 205 179 0 0 chr13 36486781 36486820 -83797492 + T-rich Low_complexity Low_complexity 2 40 0 7 863 319 222 37 12 chr13 36487025 36487107 -83797205 - L1MB7 LINE L1 -68 6116 6033 7 863 418 291 7 29 chr13 36488221 36488359 -83795953 + MLT1A0 LTR MaLR 6 140 -225 7 863 403 276 124 67 chr13 36488368 36488578 -83795734 + B4A SINE B4 16 237 -55 7 863 402 184 78 60 chr13 36488551 36488667 -83795645 + B1_Mus2 SINE Alu 29 146 -1 7 863 242 266 112 12 chr13 36488810 36488890 -83795422 + MLT1A0 LTR MaLR 287 374 0 7 863 208 318 94 65 chr13 36488984 36489122 -83795190 + MIR SINE MIR 92 233 -29 7 863 2002 188 34 80 chr13 36489549 36489723 -83794589 + RLTR28B LTR ERVL 3 171 -310 7 863 375 98 0 0 chr13 36489723 36489784 -83794528 + (TCTA)n Simple_repeat Simple_repeat 4 64 0 7 863 2002 188 34 80 chr13 36489784 36489972 -83794340 + RLTR28B LTR ERVL 172 337 -144 7 863 3369 31 34 3 chr13 36489972 36490356 -83793956 - MTA_Mm LTR MaLR 0 396 1 7 863 2002 188 34 80 chr13 36490356 36490494 -83793818 + RLTR28B LTR ERVL 338 481 0 7 863 1106 109 0 7 chr13 36490752 36490900 -83793412 + B1_Mus1 SINE Alu 2 148 0 7 863 970 282 48 41 chr13 36491153 36491467 -83792845 - MTE2b LTR MaLR -11 368 53 7 863 556 301 31 41 chr13 36491594 36491788 -83792524 - MLT1C LTR MaLR -144 323 132 7 863 277 166 27 27 chr13 36491776 36491851 -83792461 + MT2A LTR ERVL 480 554 0 7 863 274 281 24 12 chr13 36491853 36491936 -83792376 - B4A SINE B4 -202 90 7 7 863 565 270 218 25 chr13 36492157 36492494 -83791818 - MTD LTR MaLR -17 402 1 7 863 330 340 86 34 chr13 36493636 36493938 -83790374 + L1MEg LINE L1 1135 1471 -4729 7 863 370 283 136 87 chr13 36494093 36494403 -83789909 + ORR1E LTR MaLR 29 353 -6 7 863 223 184 0 155 chr13 36494822 36494880 -83789432 + ID4 SINE ID 11 59 -24 7 863 272 130 58 0 chr13 36494890 36494959 -83789353 + C-rich Low_complexity Low_complexity 1 73 0 7 863 207 100 0 0 chr13 36494959 36494989 -83789323 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 863 972 269 283 20 chr13 36495192 36495747 -83788565 + Lx8 LINE L1 6763 7463 -10 7 863 586 300 5 48 chr13 36495948 36496137 -83788175 - B3A SINE B2 0 198 18 7 863 282 143 0 0 chr13 36496338 36496387 -83787925 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 863 30 27 0 0 chr13 36496608 36496645 -83787667 + AT_rich Low_complexity Low_complexity 1 37 0 7 863 414 0 0 0 chr13 36497720 36497766 -83786546 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 863 420 280 163 41 chr13 36497777 36497932 -83786380 - B4A SINE B4 -14 278 92 7 863 318 26 0 0 chr13 36497932 36497971 -83786341 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 863 420 280 163 41 chr13 36497971 36498061 -83786251 - B4A SINE B4 -201 91 4 7 863 393 219 86 52 chr13 36498174 36498345 -83785967 - L1M5 LINE L1 -2107 4039 3859 7 863 4473 34 4 2 chr13 36498432 36498932 -83785380 - L1Md_T LINE L1 0 6582 6082 7 863 4348 19 0 0 chr13 36498932 36499463 -83784849 + L1Md_A LINE L1 5553 6083 -499 7 863 921 236 100 41 chr13 36500078 36500419 -83783893 - MTE2b LTR MaLR 0 379 19 1 863 371 306 41 0 chr13 36502645 36502766 -83781546 + B1F SINE Alu 6 131 -18 2 863 312 286 0 0 chr13 36502796 36502859 -83781453 + ID4_ SINE ID 19 81 -2 3 863 299 343 39 0 chr13 36502927 36503029 -83781283 + PB1D7 SINE Alu 15 120 0 4 863 226 200 0 0 chr13 36503859 36503909 -83780403 - L1M7 LINE L1 -4967 1251 1202 5 863 264 217 130 0 chr13 36504416 36504485 -83779827 - ID4_ SINE ID 0 83 6 6 863 377 261 43 50 chr13 36504498 36504639 -83779673 - ID_B1 SINE B4 -3 221 82 7 863 421 317 53 70 chr13 36507373 36507777 -83776535 + MLT1A0 LTR MaLR 1 406 -2 8 863 213 229 24 24 chr13 36508213 36508298 -83776014 + GA-rich Low_complexity Low_complexity 4 88 0 9 863 1043 204 253 7 chr13 36509226 36509555 -83774757 - MTD LTR MaLR 0 419 6 1 863 268 233 21 72 chr13 36509560 36509657 -83774655 - MLT1A0 LTR MaLR -273 92 1 1 863 348 24 0 0 chr13 36510069 36510110 -83774202 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 863 563 262 39 39 chr13 36511056 36511211 -83773101 + RSINE1 SINE B4 3 157 -8 1 863 200 184 0 0 chr13 36511216 36511254 -83773058 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 863 993 187 44 34 chr13 36511298 36511503 -83772809 + B3 SINE B2 4 210 -6 1 863 235 310 81 40 chr13 36513819 36513967 -83770345 + MIRb SINE MIR 30 183 -85 1 863 228 330 34 0 chr13 36513971 36514059 -83770253 + PB1D10 SINE Alu 21 111 -6 1 863 246 62 0 0 chr13 36515040 36515072 -83769240 + (GCTTG)n Simple_repeat Simple_repeat 2 33 0 1 863 274 313 62 0 chr13 36515072 36515175 -83769137 - B1F1 SINE Alu -11 106 1 1 863 6213 199 106 33 chr13 36515224 36515528 -83768784 - Lx7 LINE L1 -4 7692 7354 2 863 495 0 0 0 chr13 36515528 36515583 -83768729 + (GA)n Simple_repeat Simple_repeat 2 56 0 2 863 6213 199 106 33 chr13 36515583 36516746 -83767566 - Lx7 LINE L1 -343 7353 6120 2 863 267 299 84 0 chr13 36516839 36516946 -83767366 - PB1D10 SINE Alu -1 116 1 2 863 236 329 110 55 chr13 36517049 36517213 -83767099 - B3A SINE B2 -25 173 1 2 863 3995 112 16 28 chr13 36518010 36518646 -83765666 + RLTR5_Mm LTR ERV1 1 628 0 2 863 21 36 0 0 chr13 36518663 36518691 -83765621 + AT_rich Low_complexity Low_complexity 1 28 0 2 863 342 0 0 0 chr13 36519244 36519282 -83765030 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 863 486 288 123 0 chr13 36520102 36520248 -83764064 + B3A SINE B2 5 168 -30 2 863 207 0 0 0 chr13 36520253 36520276 -83764036 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 863 218 312 0 0 chr13 36520923 36520971 -83763341 + B1F2 SINE Alu 13 60 -89 2 863 282 305 193 14 chr13 36521161 36521457 -83762855 + Lx9 LINE L1 7295 7643 -1 3 863 234 0 0 0 chr13 36521586 36521612 -83762700 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 3 863 557 94 12 0 chr13 36521614 36521699 -83762613 + (TC)n Simple_repeat Simple_repeat 1 86 0 3 863 219 304 0 0 chr13 36522469 36522525 -83761787 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 863 180 0 0 0 chr13 36522905 36522925 -83761387 + (A)n Simple_repeat Simple_repeat 1 20 0 3 863 299 284 94 39 chr13 36523650 36523778 -83760534 - RSINE1 SINE B4 0 165 31 3 863 328 344 76 14 chr13 36524579 36524784 -83759528 - MIRc SINE MIR -44 224 4 3 863 758 269 150 19 chr13 36524983 36525297 -83759015 + ORR1E LTR MaLR 1 355 -4 3 863 23 0 0 0 chr13 36528005 36528028 -83756284 + AT_rich Low_complexity Low_complexity 1 23 0 3 863 5591 184 105 14 chr13 36529425 36530643 -83753669 - Lx9 LINE L1 -65 7579 6251 3 863 345 125 0 0 chr13 36530643 36530699 -83753613 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 863 237 264 147 28 chr13 36531168 36531277 -83753035 + MIR SINE MIR 40 161 -101 4 863 207 0 0 0 chr13 36532011 36532034 -83752278 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 863 1057 45 0 36 chr13 36532271 36532411 -83751901 - B1_Mus2 SINE Alu -11 136 2 4 863 646 198 108 51 chr13 36534297 36534473 -83749839 + B2_Mm2 SINE B2 2 187 -8 4 863 195 129 0 0 chr13 36534726 36534757 -83749555 + (GA)n Simple_repeat Simple_repeat 2 32 0 4 863 450 0 0 0 chr13 36536315 36536365 -83747947 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 863 225 0 0 0 chr13 36536365 36536389 -83747923 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 863 290 287 11 66 chr13 36537139 36537322 -83746990 + C-rich Low_complexity Low_complexity 4 176 0 4 863 271 333 0 31 chr13 36537363 36537419 -83746893 + C-rich Low_complexity Low_complexity 71 126 0 4 863 360 0 0 0 chr13 36537419 36537459 -83746853 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 4 863 271 333 0 31 chr13 36537459 36537532 -83746780 + C-rich Low_complexity Low_complexity 2 70 0 5 863 377 282 5 43 chr13 36537561 36537746 -83746566 + CT-rich Low_complexity Low_complexity 3 180 0 5 863 671 108 8 0 chr13 36539322 36539442 -83744870 + (TTCC)n Simple_repeat Simple_repeat 2 122 0 5 863 214 333 0 0 chr13 36542097 36542163 -83742149 + L4 LINE RTE 1957 2022 -7 5 863 2161 211 50 25 chr13 36542529 36542966 -83741346 + Lx6 LINE L1 7012 7459 -1 5 863 1023 200 69 10 chr13 36543213 36543415 -83740897 - B3 SINE B2 -2 214 1 5 863 881 176 6 0 chr13 36544899 36545064 -83739248 + URR1A DNA MER1_type 61 226 0 5 863 366 91 0 0 chr13 36545199 36545254 -83739058 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 863 231 329 0 47 chr13 36547227 36547313 -83736999 + ID4_ SINE ID 2 83 0 5 863 354 80 0 0 chr13 36547500 36547550 -83736762 + (TAGA)n Simple_repeat Simple_repeat 2 51 0 5 863 785 234 33 42 chr13 36547948 36548162 -83736150 + B3 SINE B2 4 215 -1 6 863 23 54 0 0 chr13 36549569 36549606 -83734706 + AT_rich Low_complexity Low_complexity 1 37 0 6 863 1695 199 105 8 chr13 36549959 36550339 -83733973 + MTC LTR MaLR 1 417 -4 6 863 963 166 69 29 chr13 36552598 36552983 -83731329 + RMER6B LTR ERVK 1 451 -10 6 863 3270 153 52 65 chr13 36553431 36554051 -83730261 + RMER1B Other Other 446 1057 -9 6 863 407 252 29 29 chr13 36554146 36554285 -83730027 + ID_B1 SINE B4 80 218 -6 6 863 465 66 0 0 chr13 36556657 36556718 -83727594 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 863 192 184 0 0 chr13 36556957 36557006 -83727306 + T-rich Low_complexity Low_complexity 1 49 0 6 863 1150 68 0 13 chr13 36557007 36557156 -83727156 - B1_Mus1 SINE Alu -1 147 1 6 863 679 305 50 17 chr13 36558745 36558985 -83725327 + MER2 DNA MER2_type 93 340 -5 6 863 227 288 0 48 chr13 36559061 36559123 -83725189 + L1MC LINE L1 5561 5619 -2263 7 863 503 257 0 17 chr13 36559137 36559252 -83725060 - PB1D10 SINE Alu -1 116 4 7 863 517 245 34 54 chr13 36560061 36560208 -83724104 + RSINE1 SINE B4 2 145 -20 7 863 657 38 0 0 chr13 36561172 36561252 -83723060 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 7 863 195 42 0 0 chr13 36562784 36562808 -83721504 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 7 863 901 282 99 55 chr13 36563972 36564358 -83719954 + MTE2a LTR MaLR 1 379 0 7 863 265 325 23 38 chr13 36564358 36564472 -83719840 + Charlie25 DNA MER1_type 515 626 -1898 7 863 265 250 60 36 chr13 36564859 36564942 -83719370 + Charlie25 DNA MER1_type 949 1033 -1491 7 863 5735 69 24 1 chr13 36565451 36566194 -83718118 - L1_Mus3 LINE L1 -5 6633 5874 7 863 230 321 120 10 chr13 36566587 36566779 -83717533 + Charlie25 DNA MER1_type 1813 2025 -499 7 863 218 291 11 55 chr13 36567553 36567644 -83716668 - MIRb SINE MIR -91 177 91 7 863 416 306 28 0 chr13 36567980 36568088 -83716224 + PB1D10 SINE Alu 1 111 -6 7 863 208 222 0 22 chr13 36569000 36569046 -83715266 + L2c LINE L2 3291 3335 -52 8 864 194 57 0 54 chr13 36570527 36570564 -83713748 + (TGGGGG)n Simple_repeat Simple_repeat 1 35 0 8 864 229 235 119 36 chr13 36572089 36572182 -83712130 - MIRb SINE MIR -107 155 57 8 864 559 254 34 59 chr13 36572299 36572537 -83711775 - L1MB8 LINE L1 -55 6123 5892 8 864 21 0 0 0 chr13 36572581 36572602 -83711710 + AT_rich Low_complexity Low_complexity 1 21 0 8 864 340 307 125 5 chr13 36572731 36572947 -83711365 - L1MB8 LINE L1 -362 5822 5581 8 864 467 285 102 0 chr13 36573159 36573296 -83711016 - RSINE1 SINE B4 -12 153 3 8 864 271 157 56 56 chr13 36573323 36573377 -83710935 - PB1D10 SINE Alu -54 95 42 8 864 604 208 83 0 chr13 36573383 36573503 -83710809 - B1_Mur2 SINE Alu -19 130 1 8 864 976 288 95 44 chr13 36573650 36573777 -83710535 - Lx9 LINE L1 -6 7638 7501 8 864 594 0 0 0 chr13 36573777 36573843 -83710469 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 8 864 976 288 95 44 chr13 36573843 36574241 -83710071 - Lx9 LINE L1 -144 7500 7086 8 864 329 290 86 39 chr13 36574310 36574590 -83709722 - L1MC5 LINE L1 -385 7576 7284 9 864 284 325 86 43 chr13 36574688 36574897 -83709415 - MLT2B3 LTR ERVL -15 539 322 9 864 1467 244 40 3 chr13 36574898 36575248 -83709064 + ORR1D2 LTR MaLR 6 368 -2 9 864 1046 280 72 6 chr13 36575439 36575784 -83708528 - MTE2b LTR MaLR -2 377 10 9 864 288 170 0 0 chr13 36577479 36577532 -83706780 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 864 198 103 0 0 chr13 36577985 36578014 -83706298 + (T)n Simple_repeat Simple_repeat 1 29 0 9 864 226 194 119 0 chr13 36578067 36578134 -83706178 - B1F SINE Alu -51 98 24 9 864 872 286 68 11 chr13 36579586 36579865 -83704447 + MLT2C1 LTR ERVL 14 308 -89 9 864 346 312 101 0 chr13 36580030 36580139 -83704173 - B1F SINE Alu -29 120 1 9 864 657 319 110 38 chr13 36580151 36580623 -83703689 - Charlie1a DNA MER1_type -318 1137 632 9 864 254 265 50 20 chr13 36580786 36580886 -83703426 - Charlie1a DNA MER1_type -1084 371 269 9 864 231 309 85 9 chr13 36581322 36581463 -83702849 - L2a LINE L2 -340 3086 2932 1 864 195 42 0 0 chr13 36582372 36582396 -83701916 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1 864 371 284 64 47 chr13 36582833 36583172 -83701140 - MTEa LTR MaLR 0 379 3 1 864 219 281 0 0 chr13 36584293 36584350 -83699962 + MIRc SINE MIR 91 147 -121 1 864 357 291 19 81 chr13 36586488 36586649 -83697663 - MER20 DNA MER1_type -68 151 1 1 864 2149 123 28 9 chr13 36587231 36587550 -83696762 - ORR1A4 LTR MaLR -4 325 1 1 864 236 329 14 0 chr13 36587671 36587744 -83696568 + ID4_ SINE ID 9 82 -1 1 864 2774 120 128 2 chr13 36588360 36588853 -83695459 + RMER4B LTR ERVK 26 580 -5 1 864 286 312 120 22 chr13 36589558 36589754 -83694558 - MIR SINE MIR -27 235 28 1 864 333 47 0 0 chr13 36590571 36590614 -83693698 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 864 1310 216 103 3 chr13 36591206 36591508 -83692804 - MTD LTR MaLR 0 419 88 1 864 403 261 23 0 chr13 36591515 36591603 -83692709 + RSINE1 SINE B4 43 132 -33 1 864 378 0 0 0 chr13 36591604 36591646 -83692666 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 864 1015 150 171 0 chr13 36591808 36592001 -83692311 + URR1A DNA MER1_type 1 226 0 1 864 426 149 9 53 chr13 36592175 36592288 -83692024 - L1Md_F2 LINE L1 0 6582 6475 1 864 853 266 26 0 chr13 36593587 36593816 -83690496 - MTEa LTR MaLR -144 235 1 1 864 250 296 64 18 chr13 36594319 36594429 -83689883 - PB1D10 SINE Alu -1 116 2 1 864 1128 296 3 14 chr13 36594468 36594756 -83689556 - B4A SINE B4 -1 291 7 1 864 260 282 199 18 chr13 36595407 36595573 -83688739 - MLT1F LTR MaLR -329 219 24 1 864 877 219 31 44 chr13 36596552 36596777 -83687535 + URR1A DNA MER1_type 1 222 -4 1 864 253 0 0 51 chr13 36596987 36597026 -83687286 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 864 237 309 114 0 chr13 36597778 36597901 -83686411 - L1MD2 LINE L1 -393 5966 5830 1 864 301 268 106 44 chr13 36599673 36599833 -83684479 - Tigger7 DNA MER2_type -45 2446 2277 1 864 244 242 15 0 chr13 36599834 36599900 -83684412 - Tigger7 DNA MER2_type -2375 116 50 1 864 349 20 40 0 chr13 36601043 36601093 -83683219 + (TC)n Simple_repeat Simple_repeat 1 52 0 1 864 369 0 0 0 chr13 36601093 36601134 -83683178 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 864 245 301 43 0 chr13 36601579 36601672 -83682640 - MIRb SINE MIR -131 137 41 1 864 354 262 36 51 chr13 36602164 36602301 -83682011 + ID_B1 SINE B4 55 189 -35 1 864 746 69 0 0 chr13 36602738 36602840 -83681472 - B1_Mm SINE Alu 0 147 46 1 864 276 171 97 28 chr13 36602781 36602853 -83681459 - RLTR25B LTR ERVK -519 509 433 1 864 240 224 0 95 chr13 36602796 36602870 -83681442 - 4.5SRNA scRNA scRNA -8 86 20 1 864 253 333 71 12 chr13 36603940 36604110 -83680202 - L2a LINE L2 -222 3204 3025 1 864 339 25 0 0 chr13 36604412 36604452 -83679860 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 864 366 269 92 8 chr13 36604472 36604592 -83679720 - RSINE1 SINE B4 -35 130 1 1 864 727 234 37 25 chr13 36604731 36604893 -83679419 - B4 SINE B4 -128 164 1 1 864 353 283 35 26 chr13 36604987 36605103 -83679209 - MLT1F LTR MaLR -410 138 22 1 864 186 150 25 0 chr13 36605160 36605200 -83679112 - MIRc SINE MIR -144 124 84 1 864 22 35 0 0 chr13 36605393 36605422 -83678890 + AT_rich Low_complexity Low_complexity 1 29 0 1 864 234 243 0 0 chr13 36605501 36605571 -83678741 + Lx5 LINE L1 6966 7035 -15 1 864 403 274 65 0 chr13 36605588 36605712 -83678600 - Lx6 LINE L1 -134 7326 7195 1 864 190 210 77 46 chr13 36606332 36606397 -83677915 - MIR SINE MIR -83 125 59 1 864 720 261 25 5 chr13 36607738 36607938 -83676374 + L1MA4 LINE L1 5724 5927 -373 1 864 216 0 0 0 chr13 36607973 36607997 -83676315 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 864 461 104 13 0 chr13 36608845 36608922 -83675390 + (TTGG)n Simple_repeat Simple_repeat 2 79 0 1 864 253 274 19 0 chr13 36612773 36612879 -83671433 + CT-rich Low_complexity Low_complexity 2 109 0 1 864 230 215 210 25 chr13 36612886 36612967 -83671345 - PB1D10 SINE Alu -7 110 15 1 864 324 48 0 0 chr13 36613152 36613194 -83671118 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 864 214 255 54 18 chr13 36613219 36613275 -83671037 - B1F SINE Alu -51 98 41 1 864 2300 85 9 6 chr13 36613705 36614023 -83670289 - ORR1A2 LTR MaLR -8 319 1 1 864 6736 57 9 1 chr13 36615024 36615868 -83668444 - L1_Mus4 LINE L1 -3 6633 5783 1 864 800 107 40 13 chr13 36615875 36616026 -83668286 - RMER17B LTR ERVK -495 463 309 1 864 4774 131 42 0 chr13 36616026 36616761 -83667551 - L1_Mm LINE L1 -88 5795 5030 1 864 474 315 60 74 chr13 36617346 36617688 -83666624 + L2c LINE L2 3023 3345 -30 1 864 255 191 0 0 chr13 36618659 36618706 -83665606 - MTEb LTR MaLR -106 273 227 1 864 804 270 49 46 chr13 36619614 36619963 -83664349 - L1MB3 LINE L1 -3 6180 5831 1 864 288 337 81 70 chr13 36620811 36621181 -83663131 + ORR1D1 LTR MaLR 1 374 0 1 864 251 323 125 0 chr13 36621438 36621534 -83662778 - MIR3 SINE MIR -9 199 92 1 864 499 277 47 89 chr13 36621933 36622147 -83662165 + MER44B DNA MER2_type 192 396 -154 1 864 3762 179 49 39 chr13 36622147 36622947 -83661365 - RMER1A Other Other -10 1020 267 1 864 597 290 115 33 chr13 36622945 36623240 -83661072 - RMER1A Other Other -451 615 116 1 864 347 259 42 78 chr13 36623251 36623393 -83660919 + MER44B DNA MER2_type 392 528 -22 1 864 202 292 119 42 chr13 36623498 36623616 -83660696 - MIRm SINE MIR -130 146 20 1 864 1506 279 98 7 chr13 36624339 36624953 -83659359 - L1MA6 LINE L1 -11 6289 5620 1 864 345 148 0 16 chr13 36626659 36626721 -83657591 - L1MB5 LINE L1 -8 6166 6106 1 864 546 16 0 0 chr13 36626920 36626983 -83657329 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 864 244 266 31 0 chr13 36627017 36627081 -83657231 - ID4_ SINE ID -16 67 2 1 864 403 272 21 49 chr13 36627090 36627233 -83657079 - ID_B1 SINE B4 -2 222 84 1 864 288 354 55 8 chr13 36627265 36627393 -83656919 - L1M3 LINE L1 -510 5673 5540 1 864 1507 163 63 60 chr13 36628066 36628398 -83655914 + Lx4B LINE L1 6723 7055 -3 1 864 981 104 146 12 chr13 36628721 36628886 -83655426 - ORR1B2 LTR MaLR -180 187 1 1 864 397 298 28 14 chr13 36629682 36629825 -83654487 + Tigger1 DNA MER2_type 1 145 -2273 1 864 604 282 27 122 chr13 36629800 36630022 -83654290 + Tigger1 DNA MER2_type 2189 2389 -29 1 864 532 292 80 41 chr13 36630590 36630911 -83653401 + MLT1C LTR MaLR 61 434 -33 1 864 183 187 26 39 chr13 36631838 36631916 -83652396 + CT-rich Low_complexity Low_complexity 4 80 0 1 864 207 37 68 85 chr13 36631938 36631997 -83652315 + CT-rich Low_complexity Low_complexity 2 59 0 1 864 428 0 19 0 chr13 36632852 36632904 -83651408 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 864 180 0 0 0 chr13 36633762 36633782 -83650530 + (CCCCCA)n Simple_repeat Simple_repeat 1 20 0 1 864 3593 18 2 0 chr13 36633987 36634382 -83649930 + MTA_Mm LTR MaLR 1 396 0 1 864 238 356 64 14 chr13 36634630 36634849 -83649463 - Charlie19a DNA Charlie -156 230 1 1 864 201 338 73 24 chr13 36634940 36635022 -83649290 + MIR3 SINE MIR 95 180 -28 1 864 557 160 421 7 chr13 36635069 36635214 -83649098 + B3 SINE B2 1 205 -11 1 864 762 302 78 58 chr13 36635319 36635663 -83648649 - ORR1E LTR MaLR 0 359 9 1 864 852 311 81 0 chr13 36635722 36636044 -83648268 + L1MB5 LINE L1 5700 6047 -127 1 864 1656 184 101 9 chr13 36636533 36636879 -83647433 - ORR1C1 LTR MaLR 0 378 1 1 864 405 344 30 37 chr13 36637136 36637378 -83646934 - L1MC4 LINE L1 -52 7990 7752 1 864 1589 179 122 20 chr13 36637378 36637581 -83646731 - ORR1C1 LTR MaLR 0 378 168 1 864 621 0 0 0 chr13 36637581 36637650 -83646662 + (GA)n Simple_repeat Simple_repeat 2 70 0 1 864 1589 179 122 20 chr13 36637650 36637789 -83646523 - ORR1C1 LTR MaLR -211 167 2 1 864 405 344 30 37 chr13 36637789 36637842 -83646470 - L1MC4 LINE L1 -291 7751 7698 1 864 508 12 0 58 chr13 36638338 36638424 -83645888 + (TGG)n Simple_repeat Simple_repeat 2 82 0 1 864 719 164 26 40 chr13 36638424 36638569 -83645743 - B1_Mur4 SINE Alu -6 144 2 1 864 746 278 113 59 chr13 36638884 36639221 -83645091 - ORR1E LTR MaLR 0 359 5 1 864 520 276 223 7 chr13 36639205 36639479 -83644833 - MLT1B LTR MaLR -49 341 9 1 864 266 317 57 9 chr13 36639746 36639851 -83644461 - B4A SINE B4 -100 192 83 1 864 335 336 45 18 chr13 36639941 36640053 -83644259 + B4A SINE B4 81 195 -97 1 864 493 302 0 0 chr13 36639953 36640059 -83644253 + B1F SINE Alu 7 112 -37 1 864 251 305 221 0 chr13 36640083 36640178 -83644134 + PB1D10 SINE Alu 1 116 -1 1 864 992 322 20 31 chr13 36640262 36640720 -83643592 - L1MA7 LINE L1 -17 6274 5822 1 864 374 239 34 0 chr13 36640735 36640823 -83643489 - HAL1-3A_ME LINE L1 -788 2070 1980 1 864 678 69 0 0 chr13 36640823 36640924 -83643388 + (TC)n Simple_repeat Simple_repeat 1 101 0 1 864 597 248 22 108 chr13 36641147 36641378 -83642934 + MTEb LTR MaLR 81 291 -88 1 864 257 264 34 22 chr13 36641393 36641482 -83642830 + MTEb LTR MaLR 264 353 -26 1 864 251 154 25 37 chr13 36641925 36642006 -83642306 + GA-rich Low_complexity Low_complexity 1 80 0 1 864 293 83 0 40 chr13 36642163 36642213 -83642099 + (CATA)n Simple_repeat Simple_repeat 1 48 0 1 864 401 53 0 18 chr13 36642456 36642513 -83641799 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 864 198 0 0 0 chr13 36642545 36642567 -83641745 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 864 495 0 0 0 chr13 36642898 36642953 -83641359 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 864 209 273 240 0 chr13 36644720 36644870 -83639442 + L3 LINE CR1 2189 2374 -2115 1 864 247 267 41 16 chr13 36644903 36645025 -83639287 + Lx9 LINE L1 7506 7630 -14 2 864 21 0 0 0 chr13 36645041 36645062 -83639250 + AT_rich Low_complexity Low_complexity 1 21 0 2 864 451 269 65 76 chr13 36645317 36645362 -83638950 + ID_B1 SINE B4 42 221 0 2 864 806 190 0 0 chr13 36645362 36645499 -83638813 + B1_Mur3 SINE Alu 13 149 0 2 864 345 103 29 14 chr13 36645504 36645573 -83638739 + (GGGA)n Simple_repeat Simple_repeat 2 71 0 2 864 461 328 111 45 chr13 36645832 36646212 -83638100 + MLT1A1 LTR MaLR 1 405 -3 2 864 249 163 0 0 chr13 36647704 36647753 -83636559 + GA-rich Low_complexity Low_complexity 1 49 0 2 864 516 299 6 25 chr13 36647765 36647926 -83636386 + RSINE1 SINE B4 3 160 -5 2 864 22 0 0 0 chr13 36647968 36647990 -83636322 + AT_rich Low_complexity Low_complexity 1 22 0 2 864 378 272 19 10 chr13 36648117 36648221 -83636091 - MTEb LTR MaLR 0 379 275 2 864 2436 157 19 29 chr13 36648857 36649277 -83635035 - MTC LTR MaLR -1 420 5 2 864 572 233 8 98 chr13 36649812 36649945 -83634367 + MTEa LTR MaLR 1 121 -258 2 864 252 0 0 0 chr13 36650097 36650125 -83634187 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 864 217 186 0 28 chr13 36650347 36650419 -83633893 + CT-rich Low_complexity Low_complexity 2 71 0 2 864 1155 258 62 8 chr13 36651087 36651345 -83632967 + MTEa LTR MaLR 108 379 0 2 864 1264 229 91 6 chr13 36651351 36651778 -83632534 - L1MC1 LINE L1 -157 6176 5696 2 864 803 180 14 21 chr13 36652186 36652328 -83631984 + B1_Mur3 SINE Alu 2 142 -7 2 864 228 67 0 0 chr13 36652331 36652361 -83631951 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 2 864 290 278 28 0 chr13 36652538 36652646 -83631666 - L1MB3 LINE L1 -219 5964 5854 2 864 198 0 0 0 chr13 36652670 36652692 -83631620 + (TC)n Simple_repeat Simple_repeat 2 23 0 2 864 598 233 100 92 chr13 36652700 36652826 -83631486 + L1MA8 LINE L1 5644 5791 -509 2 864 444 37 0 0 chr13 36652826 36652880 -83631432 + (CCA)n Simple_repeat Simple_repeat 3 56 0 2 864 598 233 100 92 chr13 36652880 36653013 -83631299 + L1MA8 LINE L1 5792 5905 -395 2 864 947 9 0 0 chr13 36653012 36653118 -83631194 - L1_Mus3 LINE L1 -768 5870 5765 2 864 5560 72 24 13 chr13 36653118 36653876 -83630436 + L1_Mus3 LINE L1 5873 6638 0 2 864 822 265 78 24 chr13 36653923 36654256 -83630056 + L1MA8 LINE L1 5940 6290 -1 2 864 1430 142 4 22 chr13 36655482 36655712 -83628600 - URR1A DNA MER1_type 0 226 1 2 864 1550 213 75 33 chr13 36655749 36656108 -83628204 + MTE2a LTR MaLR 1 374 -5 2 864 21 0 0 0 chr13 36656885 36656906 -83627406 + AT_rich Low_complexity Low_complexity 1 21 0 2 864 642 89 0 0 chr13 36657093 36657183 -83627129 + (GGGAGA)n Simple_repeat Simple_repeat 6 95 0 2 864 491 282 25 17 chr13 36657404 36657523 -83626789 + B1F SINE Alu 1 120 -29 2 864 221 302 0 0 chr13 36657496 36657559 -83626753 + B1_Mur1 SINE Alu 65 127 -22 2 864 1293 83 0 0 chr13 36657576 36657793 -83626519 + (TAGA)n Simple_repeat Simple_repeat 1 217 0 2 864 584 292 63 91 chr13 36657917 36658248 -83626064 - L1MA6 LINE L1 -141 6159 5838 2 864 493 236 17 60 chr13 36658642 36658759 -83625553 + B1F SINE Alu 36 147 -2 2 864 1466 243 50 0 chr13 36658808 36659127 -83625185 - MTD LTR MaLR 0 419 85 2 864 1627 191 59 43 chr13 36659127 36659500 -83624812 + ORR1C2 LTR MaLR 1 379 -5 2 864 1294 119 0 5 chr13 36659660 36659846 -83624466 - B2_Mm2 SINE B2 -9 186 2 2 864 4612 132 90 67 chr13 36659846 36660713 -83623599 - RMER19B LTR ERVK -15 887 1 2 864 278 310 50 41 chr13 36660719 36660840 -83623472 - B3A SINE B2 0 198 77 2 864 443 325 68 29 chr13 36660912 36661219 -83623093 - L1ME3A LINE L1 -113 6060 5742 2 864 347 311 96 11 chr13 36661338 36661608 -83622704 - L1ME3A LINE L1 -600 5573 5281 2 864 3212 148 12 6 chr13 36661740 36662249 -83622063 - RMER20A LTR ERVK 0 516 5 2 864 795 75 0 0 chr13 36662941 36663048 -83621264 + (TATG)n Simple_repeat Simple_repeat 1 107 0 2 864 496 310 23 0 chr13 36663061 36663190 -83621122 - RSINE1 SINE B4 -18 147 16 2 864 3001 116 70 8 chr13 36664131 36664618 -83619694 + RLTR11A2 LTR ERVK 1 517 -10 2 864 775 229 160 11 chr13 36664632 36664889 -83619423 + MTEa LTR MaLR 85 379 0 2 864 233 244 0 0 chr13 36664936 36664981 -83619331 - MLT1L LTR MaLR -3 607 563 2 864 216 0 0 0 chr13 36665249 36665273 -83619039 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 864 288 0 0 0 chr13 36665273 36665304 -83619008 + (GA)n Simple_repeat Simple_repeat 1 32 0 2 864 726 306 100 46 chr13 36665363 36665692 -83618620 + ORR1E LTR MaLR 8 354 -5 2 864 235 331 34 118 chr13 36665826 36666004 -83618308 + LTR16A1 LTR ERVL 264 426 -30 2 864 223 304 0 0 chr13 36667909 36667965 -83616347 - ID4 SINE ID -11 72 17 2 864 211 319 78 26 chr13 36668196 36668312 -83616000 + L2b LINE L2 3245 3366 -9 2 864 486 0 0 0 chr13 36668619 36668673 -83615639 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 864 355 283 57 14 chr13 36668957 36669097 -83615215 - MIR3 SINE MIR -29 179 34 2 864 349 218 89 16 chr13 36670960 36671061 -83613251 + PB1D7 SINE Alu 1 105 -15 2 864 327 25 0 0 chr13 36671120 36671160 -83613152 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 864 281 135 0 19 chr13 36671474 36671527 -83612785 + (GGGTG)n Simple_repeat Simple_repeat 5 56 0 2 864 304 279 69 15 chr13 36671556 36671687 -83612625 + MLT1B LTR MaLR 241 378 -12 2 864 426 69 0 0 chr13 36671851 36671909 -83612403 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 864 233 326 20 61 chr13 36672303 36672401 -83611911 + RMER15 LTR ERVL 351 444 -131 2 864 282 206 0 0 chr13 36672461 36672524 -83611788 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 864 580 239 113 6 chr13 36672712 36672889 -83611423 - L1MA4 LINE L1 -439 5861 5666 2 864 312 27 0 0 chr13 36673366 36673403 -83610909 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 864 535 340 0 0 chr13 36673403 36673547 -83610765 - RSINE1 SINE B4 -20 145 2 2 864 597 249 24 63 chr13 36673977 36674183 -83610129 - B3A SINE B2 0 198 1 2 864 189 0 0 0 chr13 36675452 36675473 -83608839 + (CCCCG)n Simple_repeat Simple_repeat 4 24 0 2 864 673 324 56 30 chr13 36676345 36676772 -83607540 - L1MB3 LINE L1 -3 6180 5743 2 864 800 48 0 9 chr13 36676772 36676878 -83607434 + (TTCTC)n Simple_repeat Simple_repeat 3 107 0 2 864 487 233 38 92 chr13 36676901 36677114 -83607198 - L1MB3 LINE L1 -510 5673 5473 2 864 351 0 0 0 chr13 36677152 36677191 -83607121 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 864 489 196 0 30 chr13 36677197 36677297 -83607015 - MTEa LTR MaLR -64 315 219 2 864 207 296 0 0 chr13 36677297 36677351 -83606961 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 2 864 834 285 31 9 chr13 36677439 36677662 -83606650 - B4 SINE B4 -61 231 4 2 864 534 218 53 30 chr13 36677709 36677878 -83606434 - L1MB3 LINE L1 -733 5461 5289 2 864 1348 105 16 0 chr13 36678047 36678238 -83606074 - B2_Mm2 SINE B2 0 195 2 2 864 1159 245 83 11 chr13 36678398 36678749 -83605563 + MTD LTR MaLR 19 419 0 2 864 1305 256 65 93 chr13 36678765 36679217 -83605095 + L1MA9 LINE L1 4522 4978 -1162 2 864 857 200 112 31 chr13 36679217 36679413 -83604899 - B3 SINE B2 -2 214 3 2 864 1305 256 65 93 chr13 36679413 36679542 -83604770 + L1MA9 LINE L1 4979 5087 -1053 2 864 302 348 119 20 chr13 36679630 36679882 -83604430 - B4A SINE B4 -10 282 6 2 864 762 267 98 40 chr13 36679889 36680625 -83603687 + L1MA9 LINE L1 5077 5890 -410 2 864 573 280 111 14 chr13 36680638 36680917 -83603395 + L1MA9 LINE L1 6002 6307 -5 2 864 573 269 115 11 chr13 36681235 36681679 -83602633 - MER67A LTR ERV1 -4 539 6 2 864 320 324 105 7 chr13 36681690 36681833 -83602479 + MLT1D LTR MaLR 283 439 -66 2 864 872 299 69 11 chr13 36682661 36683088 -83601224 + L1MB8 LINE L1 5700 6177 -1 2 864 1057 129 44 10 chr13 36683127 36683330 -83600982 + ORR1C2 LTR MaLR 1 210 -174 2 864 520 278 0 0 chr13 36683329 36683443 -83600869 - MTEb LTR MaLR -239 140 27 2 864 900 259 41 16 chr13 36683443 36683686 -83600626 + B4A SINE B4 1 249 -43 2 864 376 305 93 50 chr13 36684006 36684265 -83600047 - L3 LINE CR1 -824 3665 3396 2 864 469 282 82 22 chr13 36684807 36685039 -83599273 + L1M2 LINE L1 5539 5784 -516 2 864 647 176 0 56 chr13 36685106 36685232 -83599080 + B3A SINE B2 1 119 -79 2 864 692 269 56 56 chr13 36685312 36685667 -83598645 + L1MB1 LINE L1 5813 6167 -1 2 864 586 224 68 20 chr13 36685854 36686000 -83598312 - Lx8 LINE L1 -333 7140 6988 2 864 279 161 0 0 chr13 36686000 36686056 -83598256 + CT-rich Low_complexity Low_complexity 2 57 0 2 864 1610 239 22 22 chr13 36686056 36686415 -83597897 - Lx8 LINE L1 -440 7033 6675 2 864 1534 211 25 9 chr13 36686910 36687226 -83597086 - Lx8 LINE L1 -869 6604 6284 2 864 234 128 0 0 chr13 36687239 36687278 -83597034 + (TTG)n Simple_repeat Simple_repeat 2 40 0 2 864 241 241 24 24 chr13 36688542 36688627 -83595685 - MLT1A1 LTR MaLR -23 385 301 2 864 293 221 127 62 chr13 36689845 36689989 -83594323 - MLT1B LTR MaLR -3 502 238 2 864 1072 261 71 16 chr13 36690068 36690379 -83593933 - MTE2b LTR MaLR 0 379 52 2 864 243 321 84 14 chr13 36690456 36690598 -83593714 - MLT1B LTR MaLR -232 158 7 2 864 1267 97 43 0 chr13 36691020 36691205 -83593107 - B2_Mm1a SINE B2 0 193 1 2 864 781 279 70 44 chr13 36691258 36691573 -83592739 - Tigger7 DNA MER2_type -37 2454 2132 2 864 627 318 128 4 chr13 36691574 36691839 -83592473 - Tigger7 DNA MER2_type -2185 306 9 2 864 4810 68 0 0 chr13 36692052 36692636 -83591676 + MT2B2 LTR ERVL 1 584 0 2 864 263 317 124 62 chr13 36693078 36693320 -83590992 - ERVL-B4-int LTR ERVL -3563 2151 1895 2 864 234 246 0 15 chr13 36694439 36694505 -83589807 - B1F SINE Alu -1 148 84 2 864 233 333 11 22 chr13 36694618 36694710 -83589602 + MTE2a LTR MaLR 275 365 -14 2 864 263 202 31 82 chr13 36694722 36694819 -83589493 - L2 LINE L2 -482 2937 2846 2 864 295 296 106 6 chr13 36694946 36695106 -83589206 + L2a LINE L2 2948 3123 -303 2 864 612 0 0 0 chr13 36695162 36695230 -83589082 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 864 378 42 0 0 chr13 36695764 36695812 -83588500 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 864 253 202 37 25 chr13 36696095 36696176 -83588136 - L2a LINE L2 -79 3347 3266 3 864 873 261 93 22 chr13 36696199 36696477 -83587835 + MLT2B1 LTR ERVL 7 304 -216 3 864 1175 219 122 44 chr13 36696528 36696871 -83587441 - ORR1D2 LTR MaLR 0 370 1 3 864 450 0 0 0 chr13 36696893 36696943 -83587369 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 864 311 216 35 121 chr13 36698591 36698707 -83585605 + PB1 SINE Alu 11 116 -11 3 864 245 277 31 0 chr13 36699687 36699752 -83584560 - L1M5 LINE L1 -501 5623 5557 3 13 777 333 108 18 chr13 36699885 36700337 -83583975 - MLT1G LTR MaLR -80 511 19 3 865 1686 251 110 49 chr13 36700367 36701104 -83583208 - L1MC1 LINE L1 -38 6295 5514 3 865 519 45 0 0 chr13 36701114 36701180 -83583132 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 865 1940 26 0 0 chr13 36701861 36702087 -83582225 + L1Md_F2 LINE L1 6345 6570 -12 3 865 185 100 0 48 chr13 36702225 36702267 -83582045 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 3 865 581 14 27 0 chr13 36702333 36702406 -83581906 + (GAAA)n Simple_repeat Simple_repeat 3 77 0 3 865 388 296 32 0 chr13 36703982 36704107 -83580205 + MER58A DNA MER1_type 6 134 -90 3 865 432 204 10 58 chr13 36705572 36705676 -83578636 + PB1D10 SINE Alu 16 114 -3 3 865 950 279 5 0 chr13 36705792 36706000 -83578312 + B3 SINE B2 1 209 -7 3 865 351 0 0 0 chr13 36706122 36706161 -83578151 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 865 351 0 0 0 chr13 36706161 36706199 -83578113 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 865 494 298 35 30 chr13 36706199 36706396 -83577916 + MER2 DNA MER2_type 116 313 -32 3 865 264 276 129 8 chr13 36706489 36706613 -83577699 - MLT1F1 LTR MaLR 0 569 431 3 865 469 284 170 9 chr13 36706855 36707079 -83577233 + MER2 DNA MER2_type 86 345 0 3 865 451 242 78 94 chr13 36707509 36707828 -83576484 - L1MA5 LINE L1 0 6300 5987 3 865 1895 168 63 3 chr13 36708056 36708420 -83575892 + ORR1B1 LTR MaLR 1 386 -8 3 865 233 240 0 0 chr13 36709405 36709455 -83574857 - MTEa LTR MaLR -3 376 327 3 865 2659 282 52 27 chr13 36709495 36710274 -83574038 - RMER1C Other Other -218 1124 339 3 865 685 154 27 34 chr13 36710289 36710437 -83573875 + RMER1C Other Other 1195 1341 -1 3 865 344 281 50 50 chr13 36710465 36710481 -83573831 - MTEa LTR MaLR -42 317 303 3 865 560 264 25 61 chr13 36710481 36710679 -83573633 - B3A SINE B2 -7 191 1 3 865 1238 239 45 26 chr13 36710679 36710992 -83573320 - MTEa LTR MaLR -59 320 2 3 865 433 324 0 57 chr13 36710993 36711109 -83573203 + MER2B DNA MER2_type 175 287 -49 3 865 1993 127 97 32 chr13 36711109 36711450 -83572862 - ORR1B2 LTR MaLR 0 367 5 3 865 433 324 0 57 chr13 36711450 36711490 -83572822 + MER2B DNA MER2_type 288 322 -14 3 865 221 331 48 53 chr13 36712111 36712184 -83572128 + MIRc SINE MIR 46 120 -148 3 865 637 193 95 15 chr13 36712184 36712321 -83571991 - B1_Mur3 SINE Alu -1 148 1 3 865 221 331 48 53 chr13 36712321 36712435 -83571877 + MIRc SINE MIR 118 231 -37 3 865 389 95 0 16 chr13 36712551 36712615 -83571697 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 865 2400 207 12 117 chr13 36712639 36713295 -83571017 - LTRIS_Mus LTR ERV1 0 587 1 3 865 417 140 43 0 chr13 36713295 36713388 -83570924 + (TATG)n Simple_repeat Simple_repeat 1 97 0 3 865 207 245 0 0 chr13 36713395 36713448 -83570864 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 865 808 219 98 9 chr13 36713669 36713798 -83570514 + L1MA6 LINE L1 5655 5799 -501 3 865 534 16 0 0 chr13 36713798 36713861 -83570451 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 865 808 226 89 6 chr13 36713861 36714000 -83570312 + L1MA6 LINE L1 5769 5927 -373 3 865 272 173 0 0 chr13 36714063 36714115 -83570197 + L1MA6 LINE L1 6226 6277 -23 3 865 549 217 0 0 chr13 36714339 36714468 -83569844 + CT-rich Low_complexity Low_complexity 6 134 0 3 865 563 355 51 74 chr13 36714980 36715372 -83568940 - MLT1D LTR MaLR -15 490 108 3 865 363 262 12 0 chr13 36715396 36715476 -83568836 - PB1D7 SINE Alu -29 91 11 3 865 1178 161 167 120 chr13 36715493 36715925 -83568387 + RMER6B LTR ERVK 1 452 -9 3 865 288 20 40 20 chr13 36715925 36715975 -83568337 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 3 865 361 261 0 132 chr13 36715975 36716081 -83568231 - B1_Mur2 SINE Alu -47 102 11 3 865 295 48 0 0 chr13 36716249 36716291 -83568021 + B1_Mur4 SINE Alu 103 144 -6 3 865 693 0 0 0 chr13 36716293 36716370 -83567942 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 865 1179 218 75 44 chr13 36716622 36717013 -83567299 + L1_Rod LINE L1 3126 3522 -2621 3 865 299 45 0 43 chr13 36717314 36717360 -83566952 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 3 865 2479 127 33 12 chr13 36717463 36717862 -83566450 + MTB_Mm LTR MaLR 1 407 0 3 865 1298 228 40 76 chr13 36718022 36718402 -83565910 - RMER19C LTR ERVK -244 367 2 3 865 524 275 102 45 chr13 36718421 36718972 -83565340 - L1MEc LINE L1 -4596 1819 1224 3 865 316 183 12 24 chr13 36718972 36719056 -83565256 + CT-rich Low_complexity Low_complexity 5 87 0 3 865 434 306 94 18 chr13 36719873 36720096 -83564216 - LTR50 LTR ERVL -162 633 394 3 865 261 0 0 0 chr13 36720143 36720172 -83564140 + (A)n Simple_repeat Simple_repeat 1 29 0 3 865 432 0 0 0 chr13 36720556 36720604 -83563708 + (TTA)n Simple_repeat Simple_repeat 2 49 0 3 865 1242 34 7 0 chr13 36720616 36720763 -83563549 - B1_Mus1 SINE Alu 0 148 1 3 865 424 282 28 0 chr13 36720915 36721057 -83563255 + L1MA6 LINE L1 6133 6278 -22 3 865 256 236 33 117 chr13 36721206 36721292 -83563020 + L1M4 LINE L1 5031 5117 -1029 3 865 264 122 0 0 chr13 36721292 36721333 -83562979 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 865 256 236 33 117 chr13 36721333 36721366 -83562946 + L1M4 LINE L1 5118 5140 -1006 3 865 1050 282 46 29 chr13 36721358 36721770 -83562542 + L1MB3 LINE L1 5757 6175 -8 3 865 262 308 58 54 chr13 36721827 36721879 -83562433 + L1M4 LINE L1 5163 5209 -937 3 865 1324 115 81 9 chr13 36721879 36722090 -83562222 + URR1A DNA MER1_type 1 226 0 3 865 262 308 58 54 chr13 36722090 36722151 -83562161 + L1M4 LINE L1 5210 5274 -872 3 865 732 234 123 71 chr13 36722151 36722491 -83561821 - ORR1E LTR MaLR -1 358 1 3 865 808 286 27 11 chr13 36722491 36722802 -83561510 + L1M4 LINE L1 5275 5595 -583 3 865 842 143 0 99 chr13 36723443 36723614 -83560698 - ORR1B2 LTR MaLR -213 154 1 3 865 22 0 0 0 chr13 36723643 36723665 -83560647 + AT_rich Low_complexity Low_complexity 1 22 0 3 865 1124 191 19 26 chr13 36723985 36724301 -83560011 - Lx5 LINE L1 -210 6840 6487 3 865 935 194 5 30 chr13 36724303 36724492 -83559820 + Lx5 LINE L1 6849 7032 -18 3 865 279 0 0 0 chr13 36724492 36724523 -83559789 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 3 865 294 336 62 35 chr13 36724530 36724675 -83559637 + B3A SINE B2 34 182 -16 3 865 246 136 0 0 chr13 36724682 36724726 -83559586 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 865 369 0 0 0 chr13 36725219 36725260 -83559052 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 3 865 3376 175 122 8 chr13 36725350 36726053 -83558259 + RMER13B LTR ERVK 1 783 -125 3 865 293 211 26 29 chr13 36726210 36726308 -83558004 + MTEb LTR MaLR 279 379 0 3 865 181 294 74 32 chr13 36726426 36726521 -83557791 - MIRb SINE MIR -92 176 78 3 865 375 41 0 0 chr13 36727103 36727152 -83557160 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 865 646 284 117 4 chr13 36727206 36727453 -83556859 - B4A SINE B4 -16 276 2 3 865 198 208 0 0 chr13 36728114 36728167 -83556145 + (CCA)n Simple_repeat Simple_repeat 1 53 0 3 865 257 300 12 0 chr13 36728181 36728261 -83556051 + (CCA)n Simple_repeat Simple_repeat 2 82 0 3 865 316 299 52 40 chr13 36728270 36728444 -83555868 + HAL1-2a_MD LINE L1 2348 2523 -501 3 865 1098 294 64 73 chr13 36729134 36729669 -83554643 + L1MD1 LINE L1 5674 6203 -39 3 865 6157 210 108 31 chr13 36729668 36729813 -83554499 + Lx7 LINE L1 5603 5736 -1960 3 865 1149 58 0 0 chr13 36729813 36729951 -83554361 + B1_Mus2 SINE Alu 1 138 -9 3 865 819 0 0 0 chr13 36729951 36730042 -83554270 + (GAAA)n Simple_repeat Simple_repeat 2 92 0 3 865 6157 210 108 31 chr13 36730042 36730112 -83554200 + Lx7 LINE L1 5737 5805 -1891 3 865 1490 101 8 67 chr13 36730112 36730366 -83553946 - Lx2 LINE L1 -1 6996 6758 3 865 6157 210 108 31 chr13 36730366 36730641 -83553671 + Lx7 LINE L1 5806 6101 -1595 3 865 707 0 12 0 chr13 36730641 36730724 -83553588 + (GA)n Simple_repeat Simple_repeat 1 84 0 3 865 6157 210 108 31 chr13 36730724 36731735 -83552577 + Lx7 LINE L1 6102 7220 -476 3 865 1430 70 16 11 chr13 36731735 36731922 -83552390 + B2_Mm2 SINE B2 1 188 -7 3 865 7411 62 15 0 chr13 36731922 36732840 -83551472 - L1_Mus1 LINE L1 -1 6566 5635 3 865 1610 196 48 150 chr13 36732832 36733371 -83550941 + Lx7 LINE L1 7213 7696 0 3 865 639 90 0 0 chr13 36733412 36733512 -83550800 + (CAAAC)n Simple_repeat Simple_repeat 2 101 0 3 865 207 217 9 36 chr13 36733910 36733937 -83550375 + polypyrimidine Low_complexity Low_complexity 80 107 0 3 865 1172 62 7 0 chr13 36733937 36734083 -83550229 - B1_Mus1 SINE Alu -1 147 1 3 865 207 217 9 36 chr13 36734083 36734165 -83550147 + CT-rich Low_complexity Low_complexity 2 79 0 3 865 644 233 20 0 chr13 36734165 36734311 -83550001 - B1_Mur2 SINE Alu 0 149 1 3 865 327 314 43 104 chr13 36734664 36735087 -83549225 + RMER10A LTR ERVL 18 414 -28 3 865 406 325 24 0 chr13 36736535 36736661 -83547651 - B1F SINE Alu -20 129 1 3 865 969 57 0 0 chr13 36736782 36736906 -83547406 + (TCTCCC)n Simple_repeat Simple_repeat 4 127 0 3 865 216 0 0 0 chr13 36736906 36736929 -83547383 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 865 549 0 0 0 chr13 36738048 36738109 -83546203 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 865 613 319 121 39 chr13 36738335 36738749 -83545563 - MLT1D LTR MaLR -8 497 50 3 865 389 330 120 31 chr13 36738891 36739116 -83545196 - MT2A LTR ERVL -100 433 189 3 865 206 32 0 31 chr13 36739721 36739753 -83544559 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 3 865 451 171 16 8 chr13 36741081 36741205 -83543107 + CT-rich Low_complexity Low_complexity 4 128 0 3 865 562 288 51 42 chr13 36741341 36741555 -83542757 - B3 SINE B2 0 216 1 3 865 646 281 90 64 chr13 36741560 36742150 -83542162 - L1MA4 LINE L1 -2 6298 5694 3 865 1137 290 50 15 chr13 36742420 36742823 -83541489 + Kanga1b DNA Tc2 129 545 -234 3 865 2477 194 47 16 chr13 36742836 36743561 -83540751 + L1_Mur3 LINE L1 421 1236 -6492 3 865 522 187 73 18 chr13 36743554 36743663 -83540649 + L1_Mur3 LINE L1 5517 5631 -249 3 865 2277 182 54 0 chr13 36743668 36744059 -83540253 - Lx7 LINE L1 -951 6745 6334 4 865 3232 219 27 28 chr13 36744059 36744646 -83539666 + Lx7 LINE L1 6776 7357 -339 4 865 459 0 0 0 chr13 36744646 36744697 -83539615 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 4 865 3232 170 53 14 chr13 36744697 36744979 -83539333 + Lx7 LINE L1 7358 7696 0 4 865 242 249 90 90 chr13 36745010 36745222 -83539090 + Kanga1b DNA Tc2 565 776 -3 3 865 339 303 0 0 chr13 36745448 36745537 -83538775 + BC1_Mm scRNA scRNA 2 90 -62 4 865 305 300 0 12 chr13 36745965 36746046 -83538266 + ID SINE ID 3 82 -142 4 865 301 254 0 0 chr13 36746062 36746129 -83538183 + ID_B1 SINE B4 138 204 -20 4 865 280 121 19 75 chr13 36746131 36746238 -83538074 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 4 865 1820 213 106 53 chr13 36746795 36747454 -83536858 + RMER1B Other Other 15 584 -482 4 865 2657 238 263 10 chr13 36747457 36748272 -83536040 + RMER1A Other Other 1 1021 -9 4 865 286 352 0 116 chr13 36749026 36749190 -83535122 + MER2B DNA MER2_type 165 309 -27 4 865 729 92 38 8 chr13 36749430 36749561 -83534751 + (TCTCCC)n Simple_repeat Simple_repeat 4 138 0 4 865 1864 151 47 39 chr13 36750193 36750312 -83534000 + ORR1B2 LTR MaLR 1 118 -249 4 865 4969 4 0 0 chr13 36750312 36750852 -83533460 - L1Md_A LINE L1 0 6582 6043 4 865 1864 151 47 39 chr13 36750852 36751096 -83533216 + ORR1B2 LTR MaLR 119 367 0 4 865 1208 239 122 17 chr13 36751293 36751655 -83532657 - MTD LTR MaLR -14 405 6 4 865 2211 192 67 134 chr13 36752075 36752730 -83531582 - RMER19C LTR ERVK 0 611 1 4 865 912 102 22 22 chr13 36754129 36754309 -83530003 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 4 865 306 253 25 12 chr13 36754310 36754390 -83529922 + CT-rich Low_complexity Low_complexity 5 85 0 4 865 36320 44 1 3 chr13 36755542 36760805 -83523507 + L1Md_T LINE L1 246 5589 -297 4 865 8604 34 0 0 chr13 36760805 36761801 -83522511 + L1Md_T LINE L1 5590 6585 0 4 865 712 201 293 0 chr13 36762468 36762642 -83521670 + URR1A DNA MER1_type 1 225 -1 4 865 351 207 37 0 chr13 36762662 36762744 -83521568 + ORR1E LTR MaLR 53 137 -222 4 865 189 0 0 0 chr13 36762744 36762765 -83521547 + (TTG)n Simple_repeat Simple_repeat 2 22 0 4 865 557 229 56 28 chr13 36763066 36763210 -83521102 - B1F SINE Alu -1 148 1 4 865 1212 221 161 3 chr13 36763294 36763616 -83520696 - ORR1D1 LTR MaLR -1 373 1 4 865 224 30 0 29 chr13 36764245 36764279 -83520033 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 4 865 1255 48 0 0 chr13 36764287 36764434 -83519878 - B1_Mm SINE Alu 0 147 1 4 865 1158 260 30 67 chr13 36765065 36765436 -83518876 + ORR1E LTR MaLR 1 357 -2 4 865 613 242 25 44 chr13 36765444 36765647 -83518665 + ORR1E-int LTR MaLR 5 203 -1055 4 865 268 239 185 28 chr13 36765650 36765861 -83518451 + Lx9 LINE L1 7400 7643 -1 4 865 1587 307 31 50 chr13 36765922 36766155 -83518157 + L1_Mur3 LINE L1 4380 4586 -1557 4 865 249 33 0 0 chr13 36766155 36766185 -83518127 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 4 865 1699 304 37 25 chr13 36766185 36766913 -83517399 + L1_Mur3 LINE L1 4580 5323 -820 4 865 3158 168 37 16 chr13 36766911 36767457 -83516855 - Lx5 LINE L1 -351 6699 6143 4 865 2795 244 156 57 chr13 36767456 36768198 -83516114 + Lx8 LINE L1 5587 7050 0 4 865 261 0 0 0 chr13 36768198 36768227 -83516085 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 865 2795 302 140 24 chr13 36768227 36769480 -83514832 + Lx8 LINE L1 5760 7150 -323 4 865 4840 179 14 13 chr13 36769488 36770353 -83513959 + Lx5 LINE L1 6176 7041 -9 4 865 384 22 0 0 chr13 36770354 36770399 -83513913 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 4 865 261 279 25 0 chr13 36770495 36770574 -83513738 + Lx8 LINE L1 7391 7471 -2 4 865 488 318 119 5 chr13 36770816 36771009 -83513303 + ID_B1 SINE B4 7 221 -3 4 865 447 264 112 28 chr13 36771464 36771678 -83512634 + MIR SINE MIR 31 262 0 4 865 272 324 0 13 chr13 36771948 36772023 -83512289 + Lx8 LINE L1 6229 6302 -1171 4 865 764 225 25 26 chr13 36772359 36772563 -83511749 + B3A SINE B2 1 203 -13 4 865 242 286 95 7 chr13 36772783 36772931 -83511381 + Charlie21a DNA MER1_type 367 527 -686 4 865 733 297 78 31 chr13 36773037 36773458 -83510854 - Helitron3Na_Mam RC Helitron -42 444 4 4 865 256 286 11 35 chr13 36774533 36774620 -83509692 + MLT1A1 LTR MaLR 43 127 -281 4 865 525 308 143 0 chr13 36775195 36775468 -83508844 + MER2 DNA MER2_type 29 340 -5 4 865 252 0 0 0 chr13 36776103 36776131 -83508181 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 865 1824 177 104 38 chr13 36776320 36776713 -83507599 + MTC LTR MaLR 1 419 -2 4 865 259 274 0 0 chr13 36776766 36776828 -83507484 - MIR SINE MIR -73 189 128 4 865 248 250 0 0 chr13 36777144 36777200 -83507112 + (CATATA)n Simple_repeat Simple_repeat 2 57 0 4 865 33368 72 3 2 chr13 36779150 36784339 -83499973 + L1Md_F2 LINE L1 392 5585 -298 4 865 8477 39 1 0 chr13 36784340 36785335 -83498977 + L1Md_F2 LINE L1 5587 6582 0 4 865 254 279 419 0 chr13 36786449 36786597 -83497715 + MIRc SINE MIR 59 262 0 4 865 1678 123 36 67 chr13 36786767 36787098 -83497214 - ORR1A4 LTR MaLR -8 321 1 4 865 219 146 0 0 chr13 36788782 36788823 -83495489 + (A)n Simple_repeat Simple_repeat 1 41 0 4 865 381 301 84 19 chr13 36789013 36789249 -83495063 + L1MC5 LINE L1 6996 7244 -798 4 865 7974 63 2 1 chr13 36790015 36791185 -83493127 - L1_Mus2 LINE L1 -2 6564 5394 4 865 419 299 28 0 chr13 36791405 36791512 -83492800 + PB1D9 SINE Alu 1 110 -10 4 865 559 302 0 42 chr13 36791554 36791720 -83492592 + RSINE1 SINE B4 3 161 -4 4 865 1083 303 119 34 chr13 36791742 36792593 -83491719 + L1M3 LINE L1 3131 4160 -1980 4 865 492 18 0 0 chr13 36792594 36792651 -83491661 + (GA)n Simple_repeat Simple_repeat 2 58 0 4 865 1694 112 62 0 chr13 36792728 36792987 -83491325 - Lx2A1 LINE L1 -10 6998 6724 4 865 253 146 0 0 chr13 36793004 36793045 -83491267 + L1M3 LINE L1 4199 4239 -1901 4 865 432 0 0 0 chr13 36793049 36793097 -83491215 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 865 237 200 171 24 chr13 36793223 36793305 -83491007 + B4A SINE B4 124 217 -75 4 865 867 282 175 28 chr13 36793426 36794065 -83490247 + L1M3 LINE L1 4262 4994 -1146 4 865 3865 169 25 38 chr13 36794069 36794778 -83489534 - RMER1B Other Other -3 1063 364 4 865 358 304 93 65 chr13 36795257 36795581 -83488731 - MLT1E3 LTR MaLR -138 489 149 4 865 679 126 235 0 chr13 36797230 36797349 -83486963 + B1_Mur3 SINE Alu 2 148 -1 4 865 1082 29 81 0 chr13 36797374 36797510 -83486802 + B1_Mm SINE Alu 1 147 0 4 865 372 94 0 0 chr13 36797510 36797563 -83486749 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 4 865 719 75 16 16 chr13 36797610 36797732 -83486580 + (TCC)n Simple_repeat Simple_repeat 3 124 0 4 865 951 243 5 5 chr13 36797754 36797965 -83486347 - B3 SINE B2 -5 211 1 4 865 4599 63 28 7 chr13 36798419 36799024 -83485288 - L1Md_F2 LINE L1 0 6582 5965 4 865 287 234 25 25 chr13 36799661 36799740 -83484572 + ID4_ SINE ID 4 82 -1 4 865 766 171 13 46 chr13 36800673 36800826 -83483486 - B1_Mur2 SINE Alu -1 148 1 4 865 366 23 0 0 chr13 36800829 36800872 -83483440 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 4 865 325 271 48 56 chr13 36800875 36801000 -83483312 - MER2 DNA MER2_type -221 124 1 4 865 243 0 0 0 chr13 36802024 36802051 -83482261 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 4 865 4400 59 0 2 chr13 36802064 36802608 -83481704 - L1Md_F2 LINE L1 0 6582 6040 4 865 374 250 73 9 chr13 36802641 36802750 -83481562 - MER2B DNA MER2_type -1 335 220 4 865 695 239 165 0 chr13 36802823 36802999 -83481313 + ID_B1 SINE B4 6 210 -14 4 865 270 287 73 21 chr13 36802916 36803012 -83481300 + B1F SINE Alu 46 146 -3 4 865 186 43 0 0 chr13 36803187 36803210 -83481102 + (T)n Simple_repeat Simple_repeat 1 23 0 4 865 265 250 101 59 chr13 36803456 36803575 -83480737 - MTEa LTR MaLR -1 378 255 4 865 257 275 12 0 chr13 36803664 36803744 -83480568 - MTEa LTR MaLR -278 81 1 4 865 839 329 41 60 chr13 36804543 36804912 -83479400 + Tigger7 DNA MER2_type 6 367 -2124 4 865 1330 235 73 25 chr13 36804955 36805309 -83479003 - MTE2b LTR MaLR -8 371 1 4 865 372 266 6 128 chr13 36805309 36805422 -83478890 + Tigger7 DNA MER2_type 2386 2478 -13 4 865 588 14 0 0 chr13 36805995 36806064 -83478248 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 865 2723 177 44 78 chr13 36806431 36807063 -83477249 + RMER19C LTR ERVK 1 611 0 4 865 1406 227 79 3 chr13 36807309 36807675 -83476637 + L1_Mur3 LINE L1 4022 4415 -1465 4 865 180 342 139 0 chr13 36808162 36808241 -83476071 + MIR SINE MIR 2 91 -171 4 865 330 316 95 6 chr13 36808619 36808803 -83475509 + LTR33A LTR ERVL 36 245 -286 4 865 1095 303 50 50 chr13 36809170 36809611 -83474701 - MLT1F LTR MaLR -4 544 104 4 865 501 84 0 0 chr13 36810019 36810090 -83474222 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 865 287 335 156 18 chr13 36810958 36811183 -83473129 + ORR1E LTR MaLR 6 261 -98 4 865 371 289 107 71 chr13 36813019 36813299 -83471013 - MLT1D LTR MaLR -173 332 43 4 865 287 303 141 6 chr13 36813503 36813659 -83470653 + MIR SINE MIR 86 262 0 4 865 312 83 0 0 chr13 36814270 36814318 -83469994 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 865 23 33 0 0 chr13 36817550 36817580 -83466732 + AT_rich Low_complexity Low_complexity 1 30 0 4 865 216 0 0 0 chr13 36818140 36818164 -83466148 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 4 865 183 205 0 0 chr13 36818305 36818344 -83465968 + A-rich Low_complexity Low_complexity 1 39 0 4 865 308 329 6 52 chr13 36819180 36819353 -83464959 + C-rich Low_complexity Low_complexity 1 165 0 4 865 360 0 0 0 chr13 36819786 36819826 -83464486 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 865 675 0 0 0 chr13 36819870 36819945 -83464367 + (TC)n Simple_repeat Simple_repeat 2 76 0 4 865 22 0 0 0 chr13 36820714 36820736 -83463576 + AT_rich Low_complexity Low_complexity 1 22 0 4 865 287 25 25 0 chr13 36821020 36821060 -83463252 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 4 865 208 265 43 14 chr13 36821835 36821904 -83462408 + G-rich Low_complexity Low_complexity 1 71 0 4 865 234 0 0 0 chr13 36822653 36822679 -83461633 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 4 865 528 45 0 0 chr13 36822714 36822781 -83461531 + (TTA)n Simple_repeat Simple_repeat 2 68 0 4 865 405 0 0 0 chr13 36822903 36822948 -83461364 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 865 251 164 16 0 chr13 36826290 36826351 -83457961 + GA-rich Low_complexity Low_complexity 2 63 0 5 865 24 0 0 0 chr13 36826461 36826485 -83457827 + AT_rich Low_complexity Low_complexity 1 24 0 5 865 22 35 0 0 chr13 36830353 36830382 -83453930 + AT_rich Low_complexity Low_complexity 1 29 0 5 865 247 287 48 38 chr13 36830506 36830611 -83453701 + MLT1A LTR MaLR 65 170 -204 5 865 370 174 16 40 chr13 36830614 36830740 -83453572 + (CA)n Simple_repeat Simple_repeat 2 124 0 5 865 369 0 0 0 chr13 36830742 36830783 -83453529 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 108 1727 216 141 61 chr13 36830784 36831421 -83452891 - RMER6C LTR ERVK -2 688 1 5 866 328 293 49 49 chr13 36831578 36831700 -83452612 - B1F SINE Alu -1 148 27 5 866 6271 85 6 5 chr13 36831731 36832583 -83451729 + L1_Mus3 LINE L1 5786 6638 0 5 866 229 113 167 19 chr13 36832838 36832892 -83451420 + Lx5 LINE L1 6980 7041 -9 5 866 1334 281 28 8 chr13 36833005 36833393 -83450919 + Lx8 LINE L1 6865 7260 -213 5 866 410 199 0 14 chr13 36834014 36834152 -83450160 + (TCTG)n Simple_repeat Simple_repeat 4 139 0 5 866 371 311 38 69 chr13 36834177 36834308 -83450004 - RSINE1 SINE B4 -36 129 3 5 866 1219 303 93 23 chr13 36834667 36835099 -83449213 - MER21B LTR ERV1 -45 818 357 5 866 282 229 125 27 chr13 36835400 36835512 -83448800 - L1M2 LINE L1 -723 5460 5338 5 866 8533 43 1 0 chr13 36835548 36836969 -83447343 - L1Md_F2 LINE L1 0 6582 5159 5 866 324 0 0 0 chr13 36836975 36837011 -83447301 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 866 588 299 0 0 chr13 36837033 36837160 -83447152 - B3 SINE B2 -89 127 1 5 866 241 119 6 11 chr13 36837164 36837212 -83447100 - L1M2 LINE L1 -949 5363 5317 5 866 1106 203 24 5 chr13 36837251 36837459 -83446853 - B3 SINE B2 0 216 5 5 866 544 263 184 11 chr13 36837461 36837738 -83446574 - L1M2 LINE L1 -814 5329 5005 5 866 276 30 0 0 chr13 36837912 36837945 -83446367 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 866 241 337 0 0 chr13 36838032 36838118 -83446194 - L1MC3 LINE L1 -549 7236 7151 5 866 1344 276 113 32 chr13 36838298 36838953 -83445359 - L1MC3 LINE L1 -991 6794 6087 5 866 258 247 161 81 chr13 36839117 36839377 -83444935 - MER33 DNA MER1_type -40 284 4 5 866 251 212 30 15 chr13 36839608 36839675 -83444637 + RMER10A LTR ERVL 29 96 -346 5 866 2251 128 10 63 chr13 36840053 36840452 -83443860 - ORR1B1 LTR MaLR 0 394 17 5 866 692 131 185 0 chr13 36840601 36840731 -83443581 + RLTR42-int LTR ERVK 1116 1269 -4253 5 866 875 270 62 16 chr13 36840745 36841143 -83443169 + RMER1C Other Other 168 868 -474 5 866 600 139 167 0 chr13 36841248 36841356 -83442956 + B1_Mus1 SINE Alu 10 135 -13 5 866 285 29 0 0 chr13 36841356 36841390 -83442922 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 5 866 225 0 0 0 chr13 36842877 36842902 -83441410 + (TC)n Simple_repeat Simple_repeat 1 25 0 5 866 239 260 12 61 chr13 36843745 36843827 -83440485 + MIR3 SINE MIR 125 202 -6 5 866 185 321 0 116 chr13 36844010 36844105 -83440207 + MIR3 SINE MIR 122 205 -3 5 866 454 307 31 44 chr13 36844197 36844357 -83439955 + RSINE1 SINE B4 2 159 -6 5 866 340 310 80 49 chr13 36844684 36844847 -83439465 - MLT1D LTR MaLR -21 484 317 5 866 207 0 0 0 chr13 36844851 36844874 -83439438 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 866 1282 274 50 35 chr13 36844875 36845215 -83439097 - ORR1D2 LTR MaLR -25 345 1 5 866 433 221 19 25 chr13 36845317 36845479 -83438833 + CT-rich Low_complexity Low_complexity 4 164 0 5 866 180 376 16 33 chr13 36845624 36845745 -83438567 - L2c LINE L2 -229 3158 3040 5 866 180 304 143 29 chr13 36845790 36845895 -83438417 - L2c LINE L2 -464 2955 2839 5 866 522 330 27 85 chr13 36846256 36846587 -83437725 + RLTR25B LTR ERVK 1 312 -716 5 866 265 320 63 32 chr13 36847412 36847455 -83436857 + RLTR25B LTR ERVK 866 913 -115 5 866 351 0 0 0 chr13 36847455 36847494 -83436818 + (GA)n Simple_repeat Simple_repeat 1 39 0 5 866 265 320 63 32 chr13 36847494 36847608 -83436704 + RLTR25B LTR ERVK 914 1028 0 5 866 360 0 0 0 chr13 36847820 36847860 -83436452 + (TC)n Simple_repeat Simple_repeat 2 41 0 5 866 304 230 0 29 chr13 36847874 36847977 -83436335 + GA-rich Low_complexity Low_complexity 1 100 0 5 866 379 309 0 21 chr13 36847982 36848078 -83436234 - ID_B1 SINE B4 -47 177 84 5 866 524 271 123 26 chr13 36849157 36849312 -83435000 + B3A SINE B2 1 170 -28 5 866 313 340 103 95 chr13 36849630 36850020 -83434292 - MLT1A1 LTR MaLR -12 396 4 5 866 2638 251 82 35 chr13 36851342 36852193 -83432119 + Lx8 LINE L1 6580 7470 -3 5 866 402 310 57 57 chr13 36852223 36852346 -83431966 + B1_Mur1 SINE Alu 10 132 -17 5 866 206 174 0 21 chr13 36852377 36852424 -83431888 + GA-rich Low_complexity Low_complexity 2 47 0 5 866 550 258 32 8 chr13 36853360 36853485 -83430827 - B1_Mur2 SINE Alu -12 137 10 5 866 229 377 0 23 chr13 36853627 36853760 -83430552 + (CACCAT)n Simple_repeat Simple_repeat 2 131 0 5 866 521 278 17 29 chr13 36853769 36853943 -83430369 + HAL1-2a_MD LINE L1 2345 2516 -508 5 866 255 170 0 0 chr13 36854333 36854380 -83429932 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 866 358 317 112 18 chr13 36854488 36854658 -83429654 + MER20 DNA MER1_type 34 219 0 5 866 1948 72 243 0 chr13 36855005 36855268 -83429044 + ORR1A2 LTR MaLR 1 327 0 5 866 199 192 173 0 chr13 36856597 36856649 -83427663 + MIR SINE MIR 72 132 -130 5 866 429 20 0 0 chr13 36857122 36857172 -83427140 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 866 445 206 61 20 chr13 36857173 36857272 -83427040 - PB1D7 SINE Alu 0 120 18 5 866 326 273 80 0 chr13 36857197 36857285 -83427027 - ID_B1 SINE B4 -48 176 82 5 866 477 0 0 0 chr13 36857412 36857465 -83426847 + (TAA)n Simple_repeat Simple_repeat 2 54 0 5 866 807 282 144 25 chr13 36858236 36858556 -83425756 + ORR1E LTR MaLR 1 358 -1 5 866 2669 86 3 0 chr13 36861058 36861384 -83422928 - ORR1A2 LTR MaLR 0 327 1 5 866 23 0 0 0 chr13 36861492 36861515 -83422797 + AT_rich Low_complexity Low_complexity 1 23 0 5 866 32 26 0 0 chr13 36861650 36861689 -83422623 + AT_rich Low_complexity Low_complexity 1 39 0 5 866 577 243 57 67 chr13 36861699 36861893 -83422419 - B3A SINE B2 -6 192 1 5 866 630 194 229 0 chr13 36861910 36862085 -83422227 - Lx9 LINE L1 -8 7636 7422 5 866 6295 63 1 0 chr13 36862563 36863329 -83420983 + L1_Mus2 LINE L1 5818 6566 0 5 866 530 261 26 0 chr13 36863836 36863951 -83420361 - B1F SINE Alu -8 141 24 5 866 226 362 21 31 chr13 36863868 36863965 -83420347 - MT2B LTR ERVL -338 263 168 5 866 276 373 6 12 chr13 36864162 36864325 -83419987 - L1M5 LINE L1 -1196 4950 4789 5 866 310 238 9 65 chr13 36864946 36865054 -83419258 - L1MC5 LINE L1 -229 7732 7631 5 866 554 178 27 17 chr13 36865103 36865217 -83419095 + B1_Mur4 SINE Alu 2 109 -205 5 866 447 300 50 0 chr13 36865217 36865337 -83418975 - Lx8 LINE L1 -189 7284 7159 5 866 312 312 27 47 chr13 36865339 36865487 -83418825 - L1M2 LINE L1 -2639 4206 4062 5 866 871 180 0 0 chr13 36865520 36865659 -83418653 - B1_Mur3 SINE Alu 0 149 11 5 866 249 258 16 32 chr13 36865560 36865684 -83418628 - ORR1B1-int LTR MaLR -755 754 633 5 866 489 329 54 97 chr13 36865700 36865965 -83418347 - L1M2 LINE L1 -2824 4021 3754 5 866 1536 22 0 0 chr13 36865965 36866145 -83418167 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 5 866 520 320 83 45 chr13 36866145 36866527 -83417785 - L1M2 LINE L1 -3092 3753 3405 5 866 216 0 0 0 chr13 36866527 36866551 -83417761 + (ATG)n Simple_repeat Simple_repeat 2 25 0 5 866 520 318 90 32 chr13 36866551 36866812 -83417500 - L1M2 LINE L1 -3438 3404 3134 5 866 936 222 6 0 chr13 36866830 36866997 -83417315 - MTC LTR MaLR -57 364 197 5 866 27 29 0 0 chr13 36867012 36867046 -83417266 + AT_rich Low_complexity Low_complexity 1 34 0 5 866 906 263 70 4 chr13 36867051 36867295 -83417017 - Lx6 LINE L1 -40 7420 7161 5 866 3512 64 2 2 chr13 36867349 36867773 -83416539 - L1_Mus2 LINE L1 0 6566 6143 5 866 442 300 67 97 chr13 36867786 36868502 -83415810 - L1_Mur3 LINE L1 -3509 2371 1703 5 866 261 119 0 0 chr13 36868502 36868544 -83415768 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 866 442 290 128 71 chr13 36868544 36869025 -83415287 - L1M2 LINE L1 -2212 2404 1843 5 866 210 118 0 0 chr13 36869608 36869642 -83414670 + (T)n Simple_repeat Simple_repeat 1 34 0 5 866 266 271 0 0 chr13 36870140 36870199 -83414113 + CT-rich Low_complexity Low_complexity 1 59 0 5 866 383 232 39 29 chr13 36870236 36870338 -83413974 + B1F SINE Alu 13 115 -34 5 866 362 281 63 40 chr13 36870338 36870362 -83413950 + ID_B1 SINE B4 94 222 -2 5 866 366 257 0 0 chr13 36870547 36870722 -83413590 + (CA)n Simple_repeat Simple_repeat 2 176 0 5 866 288 53 0 0 chr13 36872737 36872775 -83411537 + (ATTG)n Simple_repeat Simple_repeat 2 39 0 5 866 194 150 25 0 chr13 36873050 36873090 -83411222 + GA-rich Low_complexity Low_complexity 3 43 0 5 866 2291 88 6 3 chr13 36873094 36873412 -83410900 - ORR1A2 LTR MaLR -8 319 1 5 866 238 281 27 80 chr13 36873997 36874109 -83410203 + MER5A DNA MER1_type 1 106 -83 5 866 31884 69 3 7 chr13 36874819 36879744 -83404568 - L1Md_F2 LINE L1 -1 6581 1674 5 866 5027 81 0 1 chr13 36879736 36880406 -83403906 + L1_Mm LINE L1 3549 4217 -1666 5 866 3556 125 53 0 chr13 36880420 36880963 -83403349 - L1Md_F2 LINE L1 -5679 937 366 5 866 996 194 10 15 chr13 36882728 36882927 -83401385 + B3 SINE B2 9 206 -10 5 866 669 210 34 34 chr13 36883115 36883263 -83401049 + B1F SINE Alu 1 148 -1 5 866 240 352 16 47 chr13 36883835 36883963 -83400349 - RMER4B LTR ERVK -456 129 6 5 866 1093 301 53 52 chr13 36884077 36884582 -83399730 - Lx8 LINE L1 -552 5328 4823 5 866 1837 268 32 32 chr13 36884572 36885371 -83398941 + Lx8 LINE L1 5321 6155 -1541 5 866 1489 298 62 7 chr13 36885560 36885999 -83398313 + Lx8 LINE L1 6191 6653 -820 5 866 11404 14 0 0 chr13 36886043 36888039 -83396273 - L1Md_T LINE L1 -1 6581 4586 5 866 2147 17 0 0 chr13 36888033 36888273 -83396039 + L1Md_T LINE L1 5347 5586 -297 5 866 9546 7 0 0 chr13 36888273 36889269 -83395043 + L1Md_T LINE L1 5587 6582 0 5 866 1157 265 121 12 chr13 36889270 36889690 -83394622 + Lx8 LINE L1 7000 7465 -8 5 866 269 235 34 45 chr13 36890125 36890214 -83394098 - L1MEg LINE L1 -4520 1488 1401 6 866 452 365 19 9 chr13 36890329 36890545 -83393767 - L1MEg LINE L1 -4840 1244 1027 6 866 440 184 214 0 chr13 36890548 36890646 -83393666 - PB1D9 SINE Alu -1 119 1 6 866 265 313 69 58 chr13 36891008 36891029 -83393283 - B4A SINE B4 -47 245 139 6 866 564 312 0 0 chr13 36891029 36891170 -83393142 - B1F1 SINE Alu -8 141 1 6 866 262 333 17 26 chr13 36891170 36891255 -83393057 + RMER12 LTR ERVK 779 862 -460 6 866 265 313 69 58 chr13 36891170 36891181 -83393131 - B4A SINE B4 -47 138 71 6 866 23 0 0 0 chr13 36892184 36892207 -83392105 + AT_rich Low_complexity Low_complexity 1 23 0 6 866 414 181 20 20 chr13 36893028 36893180 -83391132 + (TG)n Simple_repeat Simple_repeat 1 152 0 6 866 195 69 0 0 chr13 36893176 36893205 -83391107 + (TTG)n Simple_repeat Simple_repeat 1 29 0 6 866 30 83 0 0 chr13 36894552 36894624 -83389688 + AT_rich Low_complexity Low_complexity 1 72 0 6 866 1153 264 30 7 chr13 36894691 36894996 -83389316 - MTEb LTR MaLR -7 372 61 6 866 582 311 53 12 chr13 36895256 36895425 -83388887 + B3A SINE B2 1 176 -22 6 866 278 219 0 0 chr13 36895419 36895471 -83388841 - ID_B1 SINE B4 -92 132 85 6 866 661 271 47 9 chr13 36895689 36895901 -83388411 - Lx7 LINE L1 -341 7355 7136 6 866 2241 93 15 58 chr13 36895925 36896267 -83388045 - ORR1A2 LTR MaLR 0 327 1 6 866 1108 106 21 38 chr13 36896374 36896560 -83387752 - B2_Mm2 SINE B2 -10 185 3 6 866 759 246 41 16 chr13 36897167 36897361 -83386951 + B3 SINE B2 1 199 -17 6 866 1101 269 31 9 chr13 36897362 36897689 -83386623 + Lx7 LINE L1 7016 7349 -347 6 866 183 156 0 0 chr13 36897694 36897726 -83386586 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6 866 377 281 121 58 chr13 36897865 36898088 -83386224 + L1MEd LINE L1 87 323 -5796 6 866 294 293 278 12 chr13 36898192 36898424 -83385888 + Lx8 LINE L1 7174 7467 -6 6 866 776 192 11 22 chr13 36898428 36898609 -83385703 + Lx7 LINE L1 7511 7689 -7 6 866 231 235 0 0 chr13 36899497 36899548 -83384764 + T-rich Low_complexity Low_complexity 1 51 0 6 866 1107 198 71 8 chr13 36899910 36900165 -83384147 + RMER1B Other Other 781 1051 -15 6 866 1407 237 40 32 chr13 36900400 36900599 -83383713 - ORR1D1 LTR MaLR 0 374 177 6 866 660 13 0 0 chr13 36900599 36900676 -83383636 + (GA)n Simple_repeat Simple_repeat 2 78 0 6 866 1407 237 40 32 chr13 36900676 36900847 -83383465 - ORR1D1 LTR MaLR -198 176 1 6 866 315 348 52 0 chr13 36900847 36901002 -83383310 + L1M5 LINE L1 2986 3148 -2998 6 866 317 313 86 29 chr13 36901164 36901513 -83382799 + L1M5 LINE L1 3376 3744 -2402 6 866 405 244 0 0 chr13 36901667 36901745 -83382567 + ID4 SINE ID 1 78 -5 6 866 4176 142 25 29 chr13 36902260 36903015 -83381297 + RMER6A LTR ERVK 1 752 -4 6 866 376 367 21 7 chr13 36903197 36903337 -83380975 - B1F2 SINE Alu -5 144 3 6 866 228 351 64 69 chr13 36903749 36903951 -83380361 - MIR SINE MIR -39 223 23 6 866 449 279 177 4 chr13 36904448 36904629 -83379683 + L1MA4A LINE L1 5550 5786 -403 6 866 216 67 0 0 chr13 36904629 36904659 -83379653 + (CAA)n Simple_repeat Simple_repeat 3 32 0 6 866 449 279 150 0 chr13 36904659 36904801 -83379511 + L1MA4A LINE L1 5778 5935 -368 6 866 2456 61 0 3 chr13 36904801 36905113 -83379199 + L1_Mus1 LINE L1 6247 6557 -10 6 866 189 0 0 0 chr13 36905113 36905134 -83379178 + (TAA)n Simple_repeat Simple_repeat 1 21 0 6 866 254 272 12 12 chr13 36905220 36905302 -83379010 + L1MA4A LINE L1 6207 6288 -12 6 866 377 276 207 6 chr13 36905987 36906151 -83378161 + MER44D DNA MER2_type 2 198 -507 6 866 457 244 118 12 chr13 36906191 36906361 -83377951 + MER44D DNA MER2_type 483 670 -35 6 866 257 320 30 74 chr13 36907351 36907486 -83376826 - MLT1A1 LTR MaLR -26 382 254 6 866 1573 234 85 3 chr13 36907801 36908178 -83376134 - MTD LTR MaLR -2 417 10 6 866 563 361 62 37 chr13 36909023 36909299 -83375013 - MLT2B3 LTR ERVL -112 605 334 6 866 585 311 113 16 chr13 36909445 36909693 -83374619 + MLT1A LTR MaLR 90 361 -13 6 866 969 267 85 7 chr13 36910683 36911069 -83373243 - Lx8 LINE L1 -1681 5792 5409 6 866 212 192 156 52 chr13 36911212 36911289 -83373023 - MER5A DNA MER1_type -97 92 8 6 866 234 238 0 0 chr13 36912466 36912508 -83371804 + MLT2C2 LTR ERVL 18 59 -405 6 866 364 214 121 22 chr13 36912527 36912618 -83371694 + MTE2b LTR MaLR 1 100 -279 6 866 1409 236 40 23 chr13 36912835 36913186 -83371126 + ORR1E LTR MaLR 1 357 -2 6 866 248 111 22 0 chr13 36913333 36913378 -83370934 + (GGA)n Simple_repeat Simple_repeat 2 47 0 6 866 183 129 0 0 chr13 36913490 36913521 -83370791 + (GGAGA)n Simple_repeat Simple_repeat 4 34 0 6 866 486 289 113 21 chr13 36913896 36914090 -83370222 + MLT1D LTR MaLR 266 477 -28 6 866 366 296 71 0 chr13 36914094 36914192 -83370120 - PB1D7 SINE Alu -1 119 15 6 866 230 240 62 55 chr13 36914433 36914561 -83369751 - Lx7 LINE L1 -1 7695 7567 6 866 207 0 0 0 chr13 36914569 36914592 -83369720 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 866 302 0 26 0 chr13 36914674 36914712 -83369600 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 866 698 181 18 53 chr13 36914714 36914883 -83369429 - Lx7 LINE L1 -314 7382 7220 6 866 252 0 0 0 chr13 36914886 36914914 -83369398 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 866 259 301 0 0 chr13 36915475 36915548 -83368764 - ID4_ SINE ID -5 78 6 6 866 513 319 120 56 chr13 36915550 36915766 -83368546 - MER54A LTR ERVL -37 864 635 6 866 290 309 25 0 chr13 36915761 36915842 -83368470 - MER54A LTR ERVL -748 153 71 6 866 219 36 0 0 chr13 36917097 36917125 -83367187 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 866 195 69 0 0 chr13 36917128 36917157 -83367155 + (CAGAGA)n Simple_repeat Simple_repeat 4 32 0 6 866 2785 264 35 18 chr13 36917203 36917893 -83366419 - Lx8 LINE L1 -144 7329 6625 6 866 807 281 87 100 chr13 36917893 36918513 -83365799 - RLTR18 LTR ERVK -4 612 1 6 866 2785 264 35 18 chr13 36918513 36918590 -83365722 - Lx8 LINE L1 -849 6624 6549 6 866 362 321 101 32 chr13 36918575 36918913 -83365399 + Lx8 LINE L1 7030 7390 -83 6 866 1093 305 53 28 chr13 36918957 36919463 -83364849 - Lx8 LINE L1 -934 6539 6021 6 866 889 254 55 13 chr13 36919757 36920107 -83364205 - Lx8 LINE L1 -1832 5864 5508 6 866 2240 84 132 11 chr13 36920235 36920583 -83363729 + RLTR10 LTR ERVK 1 390 0 6 866 2210 176 17 10 chr13 36920614 36921032 -83363280 - MTC LTR MaLR 0 421 1 6 866 250 256 132 0 chr13 36921037 36921158 -83363154 + L1MA8 LINE L1 6148 6284 -7 6 866 240 184 0 0 chr13 36921305 36921354 -83362958 + CT-rich Low_complexity Low_complexity 4 52 0 6 866 368 305 133 36 chr13 36921423 36921912 -83362400 + L2a LINE L2 2739 3273 -153 6 866 854 296 67 40 chr13 36921922 36922249 -83362063 - MER2 DNA MER2_type -1 344 9 6 866 329 258 11 11 chr13 36922599 36922693 -83361619 + MurSatRep1 Unknown Unknown 654 747 -1390 6 866 31895 93 25 11 chr13 36923187 36929446 -83354866 - L1Md_F2 LINE L1 0 6582 238 6 866 4268 156 77 95 chr13 36930862 36931357 -83352955 - RMER19B LTR ERVK 0 902 407 6 866 3236 99 41 4 chr13 36931357 36931823 -83352489 - Lx2B LINE L1 -2 6998 6516 6 866 4268 156 77 95 chr13 36931823 36932245 -83352067 - RMER19B LTR ERVK -496 406 1 6 866 342 212 52 29 chr13 36932489 36932625 -83351687 + L1MA4 LINE L1 5786 5924 -376 6 866 379 346 115 21 chr13 36932741 36932933 -83351379 - Arthur1 DNA Tip100 -3551 396 187 6 866 216 158 0 0 chr13 36933842 36933880 -83350432 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 6 866 1154 89 47 6 chr13 36933882 36934051 -83350261 - B2_Mm2 SINE B2 -18 177 2 6 866 318 285 111 88 chr13 36934144 36934365 -83349947 - B4 SINE B4 -19 273 87 6 866 276 53 0 0 chr13 36934365 36934403 -83349909 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 866 25342 25 0 0 chr13 36935084 36938863 -83345449 - L1Md_T LINE L1 -1 6581 2803 6 866 37177 49 1 22 chr13 36938865 36945543 -83338769 - L1Md_T LINE L1 0 6582 98 6 866 468 260 73 0 chr13 36945742 36945865 -83338447 + RSINE1 SINE B4 17 148 -17 6 866 1005 122 0 0 chr13 36945883 36946039 -83338273 + (TA)n Simple_repeat Simple_repeat 2 157 0 6 866 3040 78 5 10 chr13 36946974 36947376 -83336936 - MTB LTR MaLR 0 400 1 6 866 342 326 35 14 chr13 36948259 36948402 -83335910 - B1F1 SINE Alu -1 148 3 6 866 22 0 0 0 chr13 36948657 36948679 -83335633 + AT_rich Low_complexity Low_complexity 1 22 0 6 866 242 351 0 0 chr13 36948684 36948758 -83335554 + MLT1F2 LTR MaLR 21 94 -466 6 866 1543 200 158 26 chr13 36949311 36949774 -83334538 + RMER19C LTR ERVK 88 611 0 6 866 719 352 34 44 chr13 36949774 36950159 -83334153 + MLT1F2 LTR MaLR 169 549 -11 6 866 341 351 32 29 chr13 36950186 36950497 -83333815 - L1ME3A LINE L1 -105 6068 5757 6 866 232 274 83 10 chr13 36950500 36950596 -83333716 - L1ME3A LINE L1 -524 5649 5547 6 866 640 312 75 16 chr13 36951558 36951812 -83332500 + B4 SINE B4 5 273 -19 6 866 234 0 0 0 chr13 36951845 36951871 -83332441 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 866 513 0 0 0 chr13 36951871 36951927 -83332385 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 866 243 0 0 0 chr13 36951927 36951953 -83332359 + (CTCA)n Simple_repeat Simple_repeat 3 29 0 6 866 1363 202 143 3 chr13 36952996 36953318 -83330994 + ORR1B2 LTR MaLR 1 367 0 6 866 438 125 0 14 chr13 36953433 36953506 -83330806 - ORR1C1 LTR MaLR 0 384 313 6 866 1951 132 42 0 chr13 36953506 36953793 -83330519 + Lx2 LINE L1 6325 6623 -374 6 866 478 270 55 6 chr13 36953793 36953813 -83330499 - ORR1C1 LTR MaLR -37 337 318 6 866 1628 85 0 18 chr13 36953813 36954040 -83330272 + Lx2 LINE L1 6775 6997 0 6 866 517 224 85 7 chr13 36954040 36954183 -83330129 - ORR1C1 LTR MaLR -57 317 166 6 866 369 109 0 0 chr13 36954197 36954252 -83330060 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 866 561 215 101 35 chr13 36954252 36954421 -83329891 - ORR1C1 LTR MaLR -198 180 1 6 866 1026 123 0 0 chr13 36955503 36955665 -83328647 + (TTC)n Simple_repeat Simple_repeat 1 162 0 6 866 1330 111 5 0 chr13 36955665 36955882 -83328430 - Lx2A1 LINE L1 -11 6997 6780 6 866 180 0 0 0 chr13 36956618 36956638 -83327674 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 6 866 1081 37 18 18 chr13 36957228 36957393 -83326919 + (TCTA)n Simple_repeat Simple_repeat 4 168 0 6 866 1666 218 53 47 chr13 36957725 36958192 -83326120 + RMER19C LTR ERVK 142 611 0 6 866 285 182 0 0 chr13 36959333 36959388 -83324924 + CT-rich Low_complexity Low_complexity 3 57 0 6 866 451 315 87 36 chr13 36961750 36961824 -83322488 + B4A SINE B4 2 86 -206 6 866 387 0 0 0 chr13 36961824 36961867 -83322445 + (CATA)n Simple_repeat Simple_repeat 2 44 0 7 866 451 315 87 36 chr13 36961867 36962069 -83322243 + B4A SINE B4 87 292 0 6 866 312 27 0 0 chr13 36962074 36962111 -83322201 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 867 206 254 15 45 chr13 36962826 36962892 -83321420 + MIR SINE MIR 128 191 -71 7 867 199 54 54 0 chr13 36963521 36963558 -83320754 + (TC)n Simple_repeat Simple_repeat 2 40 0 7 867 604 189 89 22 chr13 36963559 36963694 -83320618 - B1_Mur4 SINE Alu -6 144 1 7 867 472 245 9 9 chr13 36964511 36964622 -83319690 + MTEb LTR MaLR 258 368 -11 7 867 617 324 51 48 chr13 36966448 36966779 -83317533 + MLT1A LTR MaLR 4 335 -39 7 867 747 104 29 13 chr13 36967258 36967579 -83316733 + (TCTA)n Simple_repeat Simple_repeat 1 326 0 7 867 235 264 0 0 chr13 36968333 36968386 -83315926 + L3 LINE CR1 3984 4036 -453 7 867 186 43 0 0 chr13 36969001 36969024 -83315288 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 867 740 188 22 15 chr13 36969028 36969163 -83315149 - B1_Mur4 SINE Alu -13 137 2 7 867 654 143 0 0 chr13 36969321 36969440 -83314872 + (TCTA)n Simple_repeat Simple_repeat 3 121 0 7 867 636 93 0 0 chr13 36969469 36969566 -83314746 + (TAGA)n Simple_repeat Simple_repeat 4 100 0 7 867 297 0 0 0 chr13 36970512 36970545 -83313767 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 867 1481 250 103 24 chr13 36970660 36971127 -83313185 - L1MA4A LINE L1 -371 5932 5429 7 867 531 336 123 38 chr13 36971353 36971774 -83312538 - Lx8 LINE L1 -187 7286 6830 7 867 724 279 120 42 chr13 36971779 36972063 -83312249 + Lx8 LINE L1 6497 6802 -671 7 867 563 307 62 0 chr13 36973611 36973803 -83310509 - MER20 DNA MER1_type -3 216 13 7 867 4479 29 0 4 chr13 36974108 36974622 -83309690 + L1Md_F2 LINE L1 6059 6570 -12 7 867 410 283 84 21 chr13 36974740 36974931 -83309381 + Lx8 LINE L1 7262 7464 -9 7 867 269 26 0 26 chr13 36975322 36975361 -83308951 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 7 867 233 207 0 44 chr13 36976070 36976161 -83308151 + CT-rich Low_complexity Low_complexity 4 90 0 7 867 755 50 10 0 chr13 36976259 36976359 -83307953 + (GAGAA)n Simple_repeat Simple_repeat 4 104 0 7 867 1572 230 45 6 chr13 36976429 36976783 -83307529 + ORR1D2 LTR MaLR 3 370 0 7 867 23 33 0 0 chr13 36976785 36976815 -83307497 + AT_rich Low_complexity Low_complexity 1 30 0 7 867 264 91 0 0 chr13 36976943 36976987 -83307325 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 867 412 128 26 0 chr13 36977004 36977082 -83307230 + GA-rich Low_complexity Low_complexity 3 82 0 7 867 321 186 0 0 chr13 36977645 36977704 -83306608 - MIR SINE MIR -123 139 81 7 867 209 190 58 29 chr13 36979278 36979381 -83304931 + (TA)n Simple_repeat Simple_repeat 2 107 0 7 867 444 19 0 0 chr13 36981743 36981796 -83302516 + (TCC)n Simple_repeat Simple_repeat 2 54 0 7 867 352 345 20 25 chr13 36983399 36983595 -83300717 + MIR SINE MIR 32 226 -36 7 867 449 333 9 40 chr13 36984081 36984306 -83300006 + L1ME3 LINE L1 5941 6158 -4 7 867 264 245 160 60 chr13 36986428 36986528 -83297784 - MTEa LTR MaLR -58 321 212 7 867 292 306 45 0 chr13 36986888 36986999 -83297313 + L2 LINE L2 2688 2803 -616 7 867 408 266 73 0 chr13 36987028 36987137 -83297175 - RSINE1 SINE B4 -14 151 35 7 867 967 258 144 12 chr13 36987898 36988231 -83296081 - MTD LTR MaLR 0 419 43 7 867 235 362 122 7 chr13 36988278 36988417 -83295895 - MIRb SINE MIR -88 180 26 7 867 387 0 0 0 chr13 36988475 36988518 -83295794 + (T)n Simple_repeat Simple_repeat 1 43 0 7 867 474 347 77 16 chr13 36989276 36989522 -83294790 + B4A SINE B4 9 269 -23 7 867 457 274 38 0 chr13 36991064 36991170 -83293142 + PB1D10 SINE Alu 1 110 -7 7 867 540 45 0 0 chr13 36991248 36991315 -83292997 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 867 467 107 13 0 chr13 36993997 36994072 -83290240 + (GGGA)n Simple_repeat Simple_repeat 2 77 0 7 867 3127 45 0 0 chr13 36996290 36996665 -83287647 - L1_Mus1 LINE L1 0 6567 6193 7 867 1704 72 9 0 chr13 36996665 36996888 -83287424 + L1_Mus1 LINE L1 5959 6183 -384 7 867 770 76 235 0 chr13 36997358 36997477 -83286835 - B1_Mus2 SINE Alu 0 147 1 7 867 842 313 50 16 chr13 36997968 36998345 -83285967 + L1MA5 LINE L1 5696 6085 -215 7 867 2193 42 0 1 chr13 36998379 36998642 -83285670 + L1_Mm LINE L1 5329 5589 -297 7 867 8189 48 4 2 chr13 36998642 36999636 -83284676 + L1Md_F2 LINE L1 5587 6582 0 7 867 1778 126 0 25 chr13 36999636 36999656 -83284656 + L1_Mm LINE L1 5590 5605 -281 7 867 189 74 0 0 chr13 36999752 36999779 -83284533 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 867 327 256 11 11 chr13 36999902 36999993 -83284319 + B4 SINE B4 1 91 -201 7 867 804 121 0 0 chr13 37000056 37000197 -83284115 + (CA)n Simple_repeat Simple_repeat 1 141 0 1 867 1322 62 6 0 chr13 37000297 37000474 -83283838 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 2 867 257 217 43 0 chr13 37000808 37000877 -83283435 + MLT1J LTR MaLR 386 457 -55 3 867 439 264 21 28 chr13 37001206 37001350 -83282962 + MIRb SINE MIR 115 257 -11 4 867 22 0 0 0 chr13 37001352 37001374 -83282938 + AT_rich Low_complexity Low_complexity 1 22 0 5 867 23 0 0 0 chr13 37001544 37001567 -83282745 + AT_rich Low_complexity Low_complexity 1 23 0 6 867 257 0 0 29 chr13 37003268 37003302 -83281010 + (TATAG)n Simple_repeat Simple_repeat 3 35 0 7 867 1097 122 125 15 chr13 37003303 37003503 -83280809 + URR1A DNA MER1_type 3 224 -2 8 867 474 274 24 0 chr13 37003570 37003694 -83280618 - RSINE1 SINE B4 -37 128 2 9 867 349 240 154 16 chr13 37003703 37003826 -83280486 - B1F1 SINE Alu -7 142 3 1 867 437 191 9 0 chr13 37004490 37004600 -83279712 + (TATG)n Simple_repeat Simple_repeat 2 112 0 1 867 255 31 0 0 chr13 37004675 37004707 -83279605 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 867 406 129 12 12 chr13 37005457 37005543 -83278769 + (TG)n Simple_repeat Simple_repeat 2 87 0 1 867 225 131 49 0 chr13 37005608 37005669 -83278643 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 867 276 53 0 0 chr13 37005668 37005706 -83278606 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 867 210 37 0 0 chr13 37005739 37005766 -83278546 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 867 550 74 15 4 chr13 37005863 37005958 -83278354 + B1_Mus2 SINE Alu 55 149 0 1 867 317 71 42 14 chr13 37005958 37006029 -83278283 + (CAAAAA)n Simple_repeat Simple_repeat 6 78 0 1 867 225 375 0 9 chr13 37007132 37007245 -83277067 - Tigger5 DNA MER2_type 0 2406 2295 1 867 801 288 34 8 chr13 37007248 37007483 -83276829 - Tigger5 DNA MER2_type -2164 242 2 1 867 241 370 7 58 chr13 37007826 37007981 -83276331 + MIR SINE MIR 44 190 -72 2 867 214 158 0 0 chr13 37008283 37008321 -83275991 + (TGG)n Simple_repeat Simple_repeat 1 38 0 2 867 198 0 0 0 chr13 37009145 37009167 -83275145 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 2 867 705 251 256 20 chr13 37009167 37009468 -83274844 + MTD LTR MaLR 47 418 -1 2 867 456 19 0 0 chr13 37010784 37010837 -83273475 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 867 213 268 28 0 chr13 37011610 37011681 -83272631 + MIR SINE MIR 172 244 -18 2 867 1039 129 109 86 chr13 37012473 37012693 -83271619 + URR1B DNA MER1_type 1 225 0 2 867 484 279 115 19 chr13 37012695 37012852 -83271460 - ID_B1 SINE B4 -52 172 1 2 867 506 17 0 0 chr13 37012969 37013027 -83271285 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 867 848 186 0 6 chr13 37013027 37013205 -83271107 + GA-rich Low_complexity Low_complexity 3 179 0 2 867 235 75 24 24 chr13 37013205 37013246 -83271066 + (GGAGA)n Simple_repeat Simple_repeat 1 41 0 3 867 22 0 0 0 chr13 37014511 37014533 -83269779 + AT_rich Low_complexity Low_complexity 1 22 0 3 867 2805 52 17 79 chr13 37014738 37015154 -83269158 + RLTR10 LTR ERVK 1 390 0 3 867 17467 26 1 2 chr13 37015199 37017176 -83267136 + RLTR10-int LTR ERVK 11 1984 -3 3 867 2805 52 17 79 chr13 37017178 37017594 -83266718 + RLTR10 LTR ERVK 1 390 0 3 867 25 0 0 0 chr13 37017646 37017671 -83266641 + AT_rich Low_complexity Low_complexity 1 25 0 3 867 1038 126 0 0 chr13 37017671 37017814 -83266498 - B1_Mus1 SINE Alu -5 143 1 3 867 682 187 136 92 chr13 37017816 37017865 -83266447 - B3 SINE B2 0 216 163 3 867 414 0 0 0 chr13 37017865 37017911 -83266401 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 867 682 187 136 92 chr13 37017911 37018067 -83266245 - B3 SINE B2 -54 162 3 3 867 293 303 21 43 chr13 37018083 37018221 -83266091 - B3A SINE B2 -10 206 64 3 867 821 254 9 13 chr13 37018469 37018696 -83265616 - L1MA4 LINE L1 -381 5919 5694 3 867 301 292 101 0 chr13 37018787 37018876 -83265436 - Tigger7 DNA MER2_type -8 2483 2386 3 867 2452 131 34 3 chr13 37018879 37019261 -83265051 - ORR1B1 LTR MaLR 0 394 1 4 867 262 313 20 0 chr13 37019333 37019432 -83264880 - Tigger7 DNA MER2_type -2307 184 84 3 867 266 310 59 90 chr13 37019429 37019602 -83264710 + B3A SINE B2 24 208 -8 4 867 429 261 27 0 chr13 37019664 37019775 -83264537 - Tigger7 DNA MER2_type -2374 117 4 3 867 258 286 14 0 chr13 37019860 37019930 -83264382 - ID4 SINE ID -11 72 2 4 867 360 250 10 29 chr13 37019943 37020046 -83264266 + L1_Rod LINE L1 5735 5835 -12 4 867 236 226 36 54 chr13 37020502 37020614 -83263698 + (CATAT)n Simple_repeat Simple_repeat 1 110 0 4 867 314 45 0 22 chr13 37020632 37020677 -83263635 + (CATAT)n Simple_repeat Simple_repeat 4 47 0 4 867 1924 132 196 11 chr13 37020789 37021141 -83263171 + MTC LTR MaLR 5 421 0 4 867 406 298 42 21 chr13 37021266 37021410 -83262902 + RMER15 LTR ERVL 299 445 -130 4 867 210 37 0 0 chr13 37021465 37021492 -83262820 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 867 269 369 25 0 chr13 37021690 37021812 -83262500 + MLT1E1 LTR MaLR 521 645 -9 4 867 309 26 0 0 chr13 37021981 37022019 -83262293 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 867 511 231 74 0 chr13 37022042 37022150 -83262162 - RSINE1 SINE B4 -47 118 3 5 867 1404 85 16 0 chr13 37023269 37023457 -83260855 + B2_Mm2 SINE B2 1 191 -4 5 867 22 35 0 0 chr13 37024456 37024485 -83259827 + AT_rich Low_complexity Low_complexity 1 29 0 5 867 1710 16 0 20 chr13 37024489 37024686 -83259626 + B2_Mm1a SINE B2 1 193 0 5 867 1877 223 137 31 chr13 37024690 37025297 -83259015 - Lx9 LINE L1 -21 7623 6953 5 867 547 180 21 28 chr13 37026224 37026367 -83257945 + CT-rich Low_complexity Low_complexity 5 146 0 5 867 879 122 0 0 chr13 37026627 37026799 -83257513 + (TC)n Simple_repeat Simple_repeat 1 172 0 5 867 279 0 0 0 chr13 37026799 37026829 -83257483 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 867 3220 280 59 62 chr13 37026829 37028031 -83256281 + Lx8 LINE L1 6205 7403 -70 5 867 835 254 47 0 chr13 37028382 37028575 -83255737 + B3 SINE B2 2 203 -13 5 867 348 229 0 0 chr13 37028575 37028658 -83255654 + (CA)n Simple_repeat Simple_repeat 1 83 0 6 867 409 342 77 37 chr13 37028706 37029055 -83255257 + L1MB7 LINE L1 84 446 -6096 6 867 487 312 16 16 chr13 37029127 37029371 -83254941 + L1MB7 LINE L1 5478 5721 -923 6 867 216 130 0 0 chr13 37029382 37029428 -83254884 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 6 867 1128 301 117 46 chr13 37029430 37030282 -83254030 + L1MB7 LINE L1 5753 6665 -17 6 867 186 320 145 9 chr13 37030312 37030494 -83253818 + MIR SINE MIR 45 243 -25 6 867 469 155 10 10 chr13 37031567 37031660 -83252652 + (TA)n Simple_repeat Simple_repeat 1 93 0 6 867 378 0 0 0 chr13 37031660 37031702 -83252610 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 867 469 155 10 10 chr13 37031702 37031712 -83252600 + (TA)n Simple_repeat Simple_repeat 1 10 0 6 867 624 27 0 0 chr13 37031900 37031974 -83252338 + (GA)n Simple_repeat Simple_repeat 1 74 0 6 867 437 141 10 0 chr13 37033342 37033441 -83250871 + CT-rich Low_complexity Low_complexity 1 100 0 6 867 396 0 0 0 chr13 37033441 37033485 -83250827 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 867 301 268 95 0 chr13 37033830 37033959 -83250353 - MIRc SINE MIR -96 166 27 7 867 333 0 0 0 chr13 37034286 37034323 -83249989 + (TC)n Simple_repeat Simple_repeat 2 38 0 7 867 468 0 0 0 chr13 37034323 37034374 -83249938 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 867 218 206 123 31 chr13 37035268 37035333 -83248979 + MIRc SINE MIR 72 142 -126 7 867 441 281 0 10 chr13 37039024 37039121 -83245191 + B4A SINE B4 3 98 -194 7 867 302 215 92 0 chr13 37039381 37039446 -83244866 - ID4_ SINE ID -12 71 1 7 867 238 304 25 12 chr13 37039784 37039864 -83244448 + MER5A1 DNA MER1_type 7 87 -79 7 867 798 136 29 6 chr13 37040532 37040702 -83243610 + GA-rich Low_complexity Low_complexity 3 176 0 7 867 347 96 0 37 chr13 37040704 37040719 -83243593 + (GGAA)n Simple_repeat Simple_repeat 2 15 0 7 867 1328 67 0 6 chr13 37040719 37040900 -83243412 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 867 347 96 0 37 chr13 37040900 37040938 -83243374 + (GGAA)n Simple_repeat Simple_repeat 4 41 0 8 867 594 0 0 0 chr13 37040938 37041004 -83243308 + (GAA)n Simple_repeat Simple_repeat 1 66 0 8 867 646 218 199 11 chr13 37041782 37041958 -83242354 + B3 SINE B2 1 209 -7 8 867 515 296 136 33 chr13 37042578 37043190 -83241122 + HAL1b LINE L1 562 1236 -773 8 867 324 263 141 26 chr13 37043286 37043555 -83240757 + HAL1b LINE L1 1460 1759 -250 8 867 262 271 0 45 chr13 37043590 37043679 -83240633 + L1M3 LINE L1 4759 4843 -1300 8 867 278 179 36 0 chr13 37043787 37043843 -83240469 + L1M3 LINE L1 5189 5246 -894 8 867 564 299 96 0 chr13 37043931 37044192 -83240120 + L1M3 LINE L1 5520 5805 -486 8 867 1270 186 14 0 chr13 37044707 37044928 -83239384 - URR1B DNA MER1_type -1 224 1 8 867 329 262 47 16 chr13 37045040 37045168 -83239144 + RMER15 LTR ERVL 289 420 -155 8 867 216 0 0 0 chr13 37046027 37046051 -83238261 + (T)n Simple_repeat Simple_repeat 1 24 0 8 867 2315 153 55 40 chr13 37046706 37047128 -83237184 + Lx4A LINE L1 6629 7056 -2 8 867 250 342 132 34 chr13 37047201 37047579 -83236733 + L1M5 LINE L1 4660 5074 -1072 8 867 531 0 0 0 chr13 37047854 37047913 -83236399 + (TC)n Simple_repeat Simple_repeat 1 59 0 9 867 393 22 0 0 chr13 37047913 37047958 -83236354 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 867 368 315 19 22 chr13 37048017 37048248 -83236064 + L1M5 LINE L1 5255 5489 -691 8 867 738 265 16 5 chr13 37048330 37048520 -83235792 + RMER15-int LTR ERVL 4439 4630 -369 9 867 1650 230 62 78 chr13 37048521 37049072 -83235240 + Lx7 LINE L1 7155 7696 0 9 867 1458 329 62 29 chr13 37049079 37049802 -83234510 + Lx8 LINE L1 6709 7455 -18 9 867 307 273 49 0 chr13 37049860 37049955 -83234357 + L1M5 LINE L1 5679 5778 -401 8 867 243 0 0 0 chr13 37050314 37050341 -83233971 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 867 285 29 0 0 chr13 37050341 37050374 -83233938 + (GA)n Simple_repeat Simple_repeat 1 34 0 9 867 845 98 7 53 chr13 37050624 37050775 -83233537 - URR1A DNA MER1_type -5 221 78 9 867 230 302 0 0 chr13 37050875 37050938 -83233374 + GA-rich Low_complexity Low_complexity 3 65 0 9 867 189 211 38 19 chr13 37051489 37051542 -83232770 + MIRc SINE MIR 74 127 -141 9 867 402 21 0 0 chr13 37052805 37052852 -83231460 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 1 867 277 346 53 0 chr13 37053772 37053920 -83230392 + L2b LINE L2 3192 3325 -62 1 867 227 394 14 0 chr13 37053948 37054090 -83230222 + (CTA)n Simple_repeat Simple_repeat 3 146 0 1 867 403 274 22 54 chr13 37054037 37054222 -83230090 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 1 867 341 358 17 0 chr13 37054153 37054329 -83229983 + (CAT)n Simple_repeat Simple_repeat 1 179 0 1 867 504 296 6 28 chr13 37054294 37054524 -83229788 + (CACCAT)n Simple_repeat Simple_repeat 1 224 0 1 867 216 362 0 0 chr13 37054779 37054859 -83229453 + MIR SINE MIR 56 135 -73 1 867 1991 149 29 6 chr13 37055803 37056148 -83228164 + ORR1B1 LTR MaLR 42 394 0 1 867 211 250 61 30 chr13 37056358 37056424 -83227888 - MIRc SINE MIR -85 183 116 1 867 358 300 30 23 chr13 37056438 37056571 -83227741 + MER20 DNA MER1_type 18 151 -68 1 867 197 313 35 35 chr13 37057520 37057606 -83226706 + MIRc SINE MIR 173 258 -10 1 867 186 312 0 0 chr13 37058899 37058947 -83225365 + MIR SINE MIR 36 83 -125 1 867 545 282 13 47 chr13 37059124 37059273 -83225039 - B3A SINE B2 0 198 55 1 867 702 223 44 19 chr13 37059476 37059636 -83224676 + RSINE1 SINE B4 2 165 0 1 867 1598 43 16 0 chr13 37060312 37060496 -83223816 + B2_Mm2 SINE B2 4 190 -5 1 867 785 183 28 39 chr13 37060580 37060762 -83223550 + Lx7 LINE L1 7513 7692 -4 1 867 266 250 48 29 chr13 37061948 37062051 -83222261 + MLT1A1 LTR MaLR 304 408 0 1 867 1495 65 0 0 chr13 37062807 37062992 -83221320 + L1_Mus2 LINE L1 6381 6565 -1 1 867 530 283 27 7 chr13 37063243 37063389 -83220923 - RSINE1 SINE B4 -15 150 2 1 867 225 0 0 0 chr13 37063470 37063495 -83220817 + (A)n Simple_repeat Simple_repeat 1 25 0 1 867 276 170 0 0 chr13 37064780 37064827 -83219485 + MER5B DNA MER1_type 2 48 -130 1 867 252 371 44 61 chr13 37064898 37065079 -83219233 + ORR1E LTR MaLR 23 200 -159 1 867 246 289 25 126 chr13 37065255 37065374 -83218938 + MER5B DNA MER1_type 60 166 -12 1 867 180 0 0 0 chr13 37065686 37065706 -83218606 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 867 1631 71 13 9 chr13 37066365 37066592 -83217720 + L1_Mus3 LINE L1 6405 6632 -6 1 867 1083 228 81 144 chr13 37066948 37067075 -83217237 + ORR1C2 LTR MaLR 1 140 -244 1 867 543 31 0 0 chr13 37067075 37067140 -83217172 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 867 405 39 0 0 chr13 37067140 37067190 -83217122 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 867 1083 228 81 144 chr13 37067190 37067471 -83216841 + ORR1C2 LTR MaLR 141 383 -1 1 867 328 261 35 64 chr13 37069440 37069634 -83214678 + L1MC LINE L1 5340 5532 -592 1 867 405 0 0 0 chr13 37069693 37069738 -83214574 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 867 384 71 0 0 chr13 37069738 37069794 -83214518 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 867 554 221 110 0 chr13 37069808 37069935 -83214377 - B3A SINE B2 -57 141 1 1 867 351 150 0 32 chr13 37070181 37070243 -83214069 + B1_Mus1 SINE Alu 1 60 -88 1 867 1004 184 0 7 chr13 37070245 37070545 -83213767 + (CAGAGA)n Simple_repeat Simple_repeat 1 297 0 1 867 306 79 14 91 chr13 37070545 37070795 -83213517 + GA-rich Low_complexity Low_complexity 1 230 0 1 867 695 109 0 19 chr13 37070821 37070924 -83213388 + B1_Mus2 SINE Alu 42 142 -5 1 867 459 299 49 16 chr13 37071226 37071469 -83212843 - B4A SINE B4 -5 287 6 1 867 42 48 0 0 chr13 37071553 37071616 -83212696 + AT_rich Low_complexity Low_complexity 1 63 0 1 867 414 250 45 18 chr13 37071660 37071770 -83212542 - PB1D10 SINE Alu 0 117 5 1 867 335 271 11 34 chr13 37072049 37072137 -83212175 + PB1D10 SINE Alu 24 109 -8 1 867 312 288 26 5 chr13 37072200 37072329 -83211983 - MIRb SINE MIR -95 167 34 1 867 27 29 0 0 chr13 37072631 37072665 -83211647 + AT_rich Low_complexity Low_complexity 1 34 0 1 867 207 0 0 0 chr13 37072751 37072774 -83211538 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 867 1450 163 119 7 chr13 37074584 37074886 -83209426 - MTD LTR MaLR -4 415 80 1 867 206 387 28 0 chr13 37074950 37075056 -83209256 + MIR SINE MIR 37 145 -63 1 867 205 337 10 48 chr13 37075156 37075259 -83209053 + CT-rich Low_complexity Low_complexity 4 102 0 1 867 209 282 0 78 chr13 37075160 37075237 -83209075 + polypyrimidine Low_complexity Low_complexity 2 72 0 1 867 262 243 83 108 chr13 37075259 37075379 -83208933 - PB1D7 SINE Alu -2 118 2 1 867 1498 254 87 15 chr13 37075683 37076074 -83208238 + Lx6 LINE L1 7042 7460 0 1 867 437 123 0 36 chr13 37076074 37076130 -83208182 + polypurine Low_complexity Low_complexity 1 55 0 1 867 1114 64 17 11 chr13 37076130 37076305 -83208007 + (GGAA)n Simple_repeat Simple_repeat 3 178 0 1 867 437 123 0 36 chr13 37076305 37076332 -83207980 + polypurine Low_complexity Low_complexity 56 81 0 1 867 208 283 0 19 chr13 37077403 37077457 -83206855 - MIRm SINE MIR -13 263 211 1 867 181 390 0 12 chr13 37077457 37077486 -83206826 - L2a LINE L2 -15 3411 3330 1 867 1098 82 0 0 chr13 37078822 37078981 -83205331 + (CTATA)n Simple_repeat Simple_repeat 1 159 0 1 867 312 262 59 151 chr13 37079669 37079907 -83204405 + MamGypLTR2b LTR Gypsy 693 908 -14 1 867 767 263 194 40 chr13 37080259 37080584 -83203728 + MTEa LTR MaLR 2 376 -3 1 867 236 268 47 47 chr13 37081448 37081534 -83202778 - MLT1A1 LTR MaLR -322 86 1 1 867 26 30 0 0 chr13 37081635 37081668 -83202644 + AT_rich Low_complexity Low_complexity 1 33 0 1 867 303 309 103 39 chr13 37081896 37082051 -83202261 + MIRb SINE MIR 52 216 -52 1 867 279 365 26 0 chr13 37082108 37082119 -83202193 - B1F SINE Alu -3 146 136 1 867 243 61 0 0 chr13 37082119 37082152 -83202160 + (TTG)n Simple_repeat Simple_repeat 1 33 0 1 867 279 364 36 36 chr13 37082152 37082277 -83202035 - B1F SINE Alu -13 136 10 1 867 1593 301 57 40 chr13 37083411 37084006 -83200306 + Lx8 LINE L1 6549 7153 -320 1 867 368 20 20 0 chr13 37084415 37084464 -83199848 + (CAAAAA)n Simple_repeat Simple_repeat 3 52 0 1 867 289 269 15 0 chr13 37086296 37086363 -83197949 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 1 867 220 364 23 0 chr13 37086363 37086383 -83197929 + ID_B1 SINE B4 7 95 -129 1 867 791 259 15 51 chr13 37086389 37086584 -83197728 + B4 SINE B4 47 234 -58 1 867 1660 113 5 5 chr13 37088002 37088225 -83196087 + URR1B DNA MER1_type 3 225 0 1 867 6637 140 6 3 chr13 37088687 37089749 -83194563 - L1_Mm LINE L1 -651 5652 4558 1 867 7578 91 11 30 chr13 37089759 37090830 -83193482 + L1_Mus3 LINE L1 5588 6638 0 1 867 278 0 0 51 chr13 37091781 37091820 -83192492 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 867 202 282 250 33 chr13 37092252 37092432 -83191880 - L2 LINE L2 -443 2976 2758 1 868 486 279 15 163 chr13 37093614 37094020 -83190292 + L1_Rod LINE L1 53 398 -6774 1 868 571 155 21 0 chr13 37094020 37094117 -83190195 - URR1A DNA MER1_type -87 139 41 1 868 829 224 0 6 chr13 37094117 37094279 -83190033 + L1_Rod LINE L1 431 591 -6581 1 868 3604 202 84 35 chr13 37094277 37094905 -83189407 + Lx9 LINE L1 6721 7365 -279 1 868 1698 212 60 11 chr13 37094905 37095254 -83189058 - ORR1B2 LTR MaLR -1 366 1 1 868 3604 202 84 35 chr13 37095254 37095376 -83188936 + Lx9 LINE L1 7366 7478 -166 1 868 474 18 0 0 chr13 37095376 37095431 -83188881 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 868 3604 202 84 35 chr13 37095431 37095509 -83188803 + Lx9 LINE L1 7479 7590 -54 1 868 1700 225 85 13 chr13 37096193 37096580 -83187732 + MTD LTR MaLR 1 415 -4 1 868 313 297 235 24 chr13 37096899 37097154 -83187158 + L1MC4 LINE L1 6759 7067 -975 1 868 228 217 32 48 chr13 37097280 37097343 -83186969 + LTR16A LTR ERVL 1 62 -389 1 868 332 346 130 74 chr13 37097461 37097692 -83186620 + LTR16A LTR ERVL 208 451 0 1 868 307 335 94 94 chr13 37097710 37097997 -83186315 + MLT1A1 LTR MaLR 54 340 -68 1 868 388 310 83 105 chr13 37098042 37098223 -83186089 + L1MC4 LINE L1 7423 7602 -440 1 868 1903 189 16 50 chr13 37098223 37098602 -83185710 - ORR1D2 LTR MaLR 0 370 5 1 868 388 310 83 105 chr13 37098602 37098828 -83185484 + L1MC4 LINE L1 7603 7821 -221 1 868 1111 288 43 38 chr13 37100241 37100587 -83183725 - MLT1A0 LTR MaLR -16 349 2 1 868 1109 164 112 19 chr13 37101139 37101344 -83182968 + URR1A DNA MER1_type 2 225 -1 1 868 1397 136 56 14 chr13 37103786 37104002 -83180310 - URR1B DNA MER1_type 0 225 1 1 868 837 296 103 21 chr13 37104093 37104607 -83179705 + L1MA6 LINE L1 5744 6299 -1 1 868 287 321 12 0 chr13 37104858 37104939 -83179373 + ID4_ SINE ID 2 83 0 1 868 225 0 0 0 chr13 37106131 37106156 -83178156 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 868 360 0 0 0 chr13 37106156 37106195 -83178117 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 868 263 234 0 0 chr13 37106198 37106262 -83178050 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 868 630 200 0 16 chr13 37106514 37106636 -83177676 - MTC LTR MaLR -8 413 294 1 868 556 254 45 25 chr13 37106636 37106834 -83177478 - L1M2 LINE L1 -770 5521 5320 1 868 310 179 36 0 chr13 37107388 37107444 -83176868 - PB1D7 SINE Alu -19 101 44 1 868 735 22 0 0 chr13 37109746 37109835 -83174477 - L1Md_T LINE L1 0 6582 6494 1 868 7637 27 0 0 chr13 37109835 37111000 -83173312 + L1Md_T LINE L1 5307 6471 -111 1 868 437 312 39 58 chr13 37112062 37112292 -83172020 + ORR1E LTR MaLR 1 223 -147 1 868 246 74 36 18 chr13 37112537 37112592 -83171720 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 1 868 618 320 107 35 chr13 37112874 37113205 -83171107 + L1MA4 LINE L1 5443 5799 -501 1 868 414 0 0 0 chr13 37113205 37113251 -83171061 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 868 618 320 107 35 chr13 37113251 37113454 -83170858 + L1MA4 LINE L1 5800 6014 -286 1 868 653 0 13 0 chr13 37113696 37113773 -83170539 + (GA)n Simple_repeat Simple_repeat 1 78 0 1 868 198 0 0 0 chr13 37114001 37114023 -83170289 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 1 868 329 17 0 65 chr13 37114027 37114089 -83170223 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 1 868 1120 81 0 0 chr13 37114089 37114237 -83170075 - B1_Mus1 SINE Alu 0 148 1 2 868 891 112 0 0 chr13 37114344 37114478 -83169834 + (GGGA)n Simple_repeat Simple_repeat 4 137 0 2 868 186 43 0 0 chr13 37114646 37114669 -83169643 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 868 443 253 72 57 chr13 37114785 37114978 -83169334 - B3A SINE B2 -1 197 2 2 868 413 302 8 8 chr13 37115033 37115150 -83169162 - RSINE1 SINE B4 -47 118 2 2 868 268 308 99 12 chr13 37115804 37115975 -83168337 + LTR16A LTR ERVL 208 393 -58 2 868 930 65 0 98 chr13 37116211 37116364 -83167948 + L1_Mus1 LINE L1 6430 6567 0 2 868 417 244 228 0 chr13 37119525 37119652 -83164660 + B4A SINE B4 130 285 -7 2 868 357 82 0 0 chr13 37119660 37119709 -83164603 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 868 3299 138 198 63 chr13 37120135 37120686 -83163626 + RLTR25A LTR ERVK 1 625 -478 2 868 1019 64 49 21 chr13 37120686 37120701 -83163611 - B1_Mus2 SINE Alu 0 147 135 2 868 270 0 0 0 chr13 37120701 37120731 -83163581 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2 868 1019 64 49 21 chr13 37120731 37120858 -83163454 - B1_Mus2 SINE Alu -13 134 1 2 868 3299 137 179 42 chr13 37120858 37121215 -83163097 + RLTR25A LTR ERVK 626 1102 -1 2 868 1051 256 124 14 chr13 37122037 37122390 -83161922 - MTD LTR MaLR -14 405 18 2 868 638 283 15 20 chr13 37123542 37123737 -83160575 + B3A SINE B2 5 198 0 2 868 261 116 14 28 chr13 37123775 37123846 -83160466 + T-rich Low_complexity Low_complexity 2 71 0 2 868 455 301 30 0 chr13 37123847 37123980 -83160332 + MIR SINE MIR 6 142 -120 2 868 399 100 0 0 chr13 37124780 37124850 -83159462 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 868 351 0 0 0 chr13 37124850 37124888 -83159424 + (CCTA)n Simple_repeat Simple_repeat 2 40 0 2 868 594 190 17 22 chr13 37125676 37125854 -83158458 + GA-rich Low_complexity Low_complexity 4 180 0 2 868 318 220 10 20 chr13 37125878 37125980 -83158332 + GA-rich Low_complexity Low_complexity 1 101 0 2 868 21 36 0 0 chr13 37126760 37126788 -83157524 + AT_rich Low_complexity Low_complexity 1 28 0 2 868 434 338 52 24 chr13 37127729 37127941 -83156371 - B4A SINE B4 -73 219 2 2 868 211 368 77 0 chr13 37128090 37128207 -83156105 - PB1 SINE Alu 0 127 2 2 868 3050 18 0 0 chr13 37128591 37128928 -83155384 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 868 57051 22 10 7 chr13 37128928 37135380 -83148932 + IAPEz-int LTR ERVK 8 6481 0 2 868 3050 18 0 0 chr13 37135380 37135717 -83148595 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 868 245 294 0 29 chr13 37136128 37136198 -83148114 + B4A SINE B4 1 68 -224 2 868 525 280 21 7 chr13 37136212 37136356 -83147956 + B4A SINE B4 127 272 -20 2 868 432 0 0 0 chr13 37136359 37136407 -83147905 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 868 279 233 87 22 chr13 37136641 37136733 -83147579 - PB1D10 SINE Alu -8 109 12 2 868 648 0 0 0 chr13 37141600 37141672 -83142640 + (CCCCAG)n Simple_repeat Simple_repeat 3 74 0 2 868 389 214 9 97 chr13 37142388 37142502 -83141810 - MLT1A1 LTR MaLR 0 408 305 2 868 268 267 32 64 chr13 37142760 37142879 -83141433 - MLT1A1 LTR MaLR -231 134 23 2 868 456 246 15 8 chr13 37144447 37144578 -83139734 - LTR33A LTR ERVL -11 509 378 2 868 906 207 37 18 chr13 37145957 37146174 -83138138 - MTB_Mm LTR MaLR -5 416 196 2 868 522 114 0 0 chr13 37146175 37146254 -83138058 + (TTTC)n Simple_repeat Simple_repeat 3 81 0 2 868 198 0 0 0 chr13 37146286 37146308 -83138004 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2 868 674 113 51 102 chr13 37146312 37146469 -83137843 - Lx LINE L1 -25 6629 6481 2 868 1058 133 0 48 chr13 37146469 37146658 -83137654 - MTB_Mm LTR MaLR -227 180 1 2 868 798 94 7 21 chr13 37147145 37147286 -83137026 + (TTTC)n Simple_repeat Simple_repeat 3 141 0 2 868 345 269 11 0 chr13 37147432 37147528 -83136784 + PB1D10 SINE Alu 1 102 -18 2 868 540 0 0 0 chr13 37147898 37147958 -83136354 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 868 303 254 40 80 chr13 37149775 37149925 -83134387 + MLT1H2 LTR MaLR 346 489 0 2 868 250 272 107 0 chr13 37149925 37150028 -83134284 - L2c LINE L2 -3 3384 3271 2 868 477 0 0 0 chr13 37150154 37150207 -83134105 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 868 814 80 4 79 chr13 37150891 37151132 -83133180 + (TCTA)n Simple_repeat Simple_repeat 1 223 0 2 868 258 296 45 0 chr13 37151333 37151421 -83132891 + Lx8 LINE L1 7261 7352 -121 2 868 486 275 142 0 chr13 37151579 37151797 -83132515 - MER2 DNA MER2_type -94 251 3 2 868 216 254 0 35 chr13 37151910 37151967 -83132345 + GA-rich Low_complexity Low_complexity 6 60 0 2 868 342 344 37 84 chr13 37152214 37152512 -83131800 + ORR1E LTR MaLR 76 359 0 2 868 270 56 0 0 chr13 37153646 37153682 -83130630 + (GGA)n Simple_repeat Simple_repeat 1 36 0 2 868 497 280 141 77 chr13 37154898 37155289 -83129023 - MER89 LTR ERV1 -7 552 137 2 868 1998 274 69 27 chr13 37155324 37155815 -83128497 + RCHARR1 DNA MER1_type 1 514 -460 2 868 261 0 0 0 chr13 37155815 37155844 -83128468 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 868 1998 282 313 14 chr13 37155844 37156177 -83128135 + RCHARR1 DNA MER1_type 515 944 -30 2 868 682 338 79 61 chr13 37156261 37156705 -83127607 - MER44B DNA MER2_type 0 550 99 2 868 210 37 0 0 chr13 37156714 37156741 -83127571 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 2 868 320 314 58 36 chr13 37157809 37157948 -83126364 + MLT1J LTR MaLR 36 177 -335 2 868 313 355 0 0 chr13 37158793 37158903 -83125409 + GA-rich Low_complexity Low_complexity 3 112 0 2 868 2678 44 0 3 chr13 37161405 37161726 -83122586 + L1Md_F3 LINE L1 6251 6570 -14 2 868 911 261 71 58 chr13 37161802 37162197 -83122115 - MTE2a LTR MaLR 0 419 8 2 868 428 140 11 0 chr13 37162942 37163035 -83121277 + (CA)n Simple_repeat Simple_repeat 2 95 0 2 868 220 74 35 53 chr13 37164045 37164102 -83120210 + (TTA)n Simple_repeat Simple_repeat 2 57 0 2 868 3641 102 24 26 chr13 37164291 37164832 -83119480 + Lx3B LINE L1 6432 6971 -2 2 868 221 310 12 12 chr13 37164835 37164920 -83119392 + GA-rich Low_complexity Low_complexity 2 86 0 2 868 540 311 11 16 chr13 37165320 37165506 -83118806 - L1MEb LINE L1 -5626 444 260 2 868 931 60 0 8 chr13 37165704 37165838 -83118474 - L1Md_F2 LINE L1 0 6582 6450 2 868 6578 58 6 1 chr13 37166684 37167502 -83116810 + L1_Mus3 LINE L1 5793 6614 -24 2 868 5300 181 128 52 chr13 37168099 37169257 -83115055 + RLTR21 LTR ERVK 1 1180 -392 2 868 414 57 0 0 chr13 37169257 37169310 -83115002 + (TATG)n Simple_repeat Simple_repeat 4 56 0 2 868 5300 190 108 100 chr13 37169310 37169550 -83114762 + RLTR21 LTR ERVK 1181 1433 -139 2 868 377 372 27 56 chr13 37170473 37170679 -83113633 + B3A SINE B2 6 203 -13 2 868 23 33 0 0 chr13 37170691 37170721 -83113591 + AT_rich Low_complexity Low_complexity 1 30 0 2 868 235 329 14 0 chr13 37170879 37170949 -83113363 + ID4_ SINE ID 7 77 -6 2 868 182 37 0 36 chr13 37171021 37171049 -83113263 + (TAA)n Simple_repeat Simple_repeat 3 29 0 2 868 238 257 26 39 chr13 37174418 37174572 -83109740 + (CATA)n Simple_repeat Simple_repeat 4 155 0 2 868 660 270 7 45 chr13 37175192 37175347 -83108965 + RSINE1 SINE B4 4 152 -13 2 868 324 0 0 0 chr13 37175357 37175393 -83108919 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 868 259 208 45 32 chr13 37175394 37175548 -83108764 + (TATAA)n Simple_repeat Simple_repeat 4 159 0 2 868 253 179 54 0 chr13 37175759 37175815 -83108497 - MLT1A1 LTR MaLR -339 69 11 2 868 318 26 0 0 chr13 37175815 37175854 -83108458 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2 868 429 70 0 0 chr13 37176709 37176766 -83107546 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 868 1014 196 71 5 chr13 37176971 37177181 -83107131 - Lx7 LINE L1 -280 7416 7193 2 868 1337 33 7 0 chr13 37177329 37177482 -83106830 + L1_Mus1 LINE L1 6414 6567 0 2 868 320 271 142 8 chr13 37177548 37177808 -83106504 - L1MA9 LINE L1 0 6312 6018 2 868 898 272 167 0 chr13 37177808 37178095 -83106217 + MTE2b LTR MaLR 1 335 -44 2 868 920 301 86 60 chr13 37178140 37178802 -83105510 - L1MA4A LINE L1 -278 6022 5349 2 868 579 206 27 60 chr13 37178889 37179039 -83105273 + RMER15 LTR ERVL 27 171 -404 2 868 598 242 138 55 chr13 37179046 37179300 -83105012 + RMER15 LTR ERVL 277 551 -24 2 868 424 313 14 0 chr13 37179304 37179451 -83104861 - L1_Mur3 LINE L1 -2078 3802 3654 2 868 673 246 79 59 chr13 37179475 37179678 -83104634 + B3 SINE B2 10 216 0 2 868 1002 300 48 44 chr13 37179687 37180352 -83103960 - L1MA4A LINE L1 -2464 3679 3015 2 868 1610 207 44 6 chr13 37180358 37180679 -83103633 + MT2A LTR ERVL 1 333 -200 2 868 222 37 0 0 chr13 37182355 37182382 -83101930 + (T)n Simple_repeat Simple_repeat 1 27 0 2 868 228 270 66 22 chr13 37182615 37182706 -83101606 + ORR1D2 LTR MaLR 276 370 0 2 868 2409 215 32 20 chr13 37182790 37183346 -83100966 - Lx2B LINE L1 -42 6958 6396 2 868 704 193 0 9 chr13 37183496 37183611 -83100701 + B1_Mur2 SINE Alu 9 122 -27 2 868 237 65 0 0 chr13 37183627 37183658 -83100654 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 2 868 3422 118 66 2 chr13 37187668 37188196 -83096116 + Lx2 LINE L1 6079 6640 -357 2 868 1300 147 46 0 chr13 37188196 37188414 -83095898 + Lx2 LINE L1 6770 6997 0 2 868 696 107 0 0 chr13 37188793 37188896 -83095416 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 2 868 228 67 0 0 chr13 37188896 37188926 -83095386 + (GGGAGA)n Simple_repeat Simple_repeat 1 30 0 2 868 261 260 27 14 chr13 37189319 37189393 -83094919 + CT-rich Low_complexity Low_complexity 2 76 0 2 868 927 218 0 0 chr13 37190562 37190724 -83093588 + URR1B DNA MER1_type 1 162 -63 2 868 1956 212 20 34 chr13 37190724 37191163 -83093149 - RMER19C LTR ERVK 0 611 179 2 868 449 159 0 0 chr13 37191232 37191301 -83093011 + URR1B DNA MER1_type 157 225 0 2 868 423 0 0 0 chr13 37191787 37191834 -83092478 + (TTTTA)n Simple_repeat Simple_repeat 1 47 0 2 868 267 275 116 0 chr13 37191834 37191903 -83092409 - PB1D7 SINE Alu -12 108 32 2 868 284 234 38 38 chr13 37192205 37192285 -83092027 - PB1 SINE Alu -2 125 46 2 868 337 228 24 37 chr13 37192931 37193013 -83091299 - ID4 SINE ID -1 82 2 2 868 229 291 75 37 chr13 37193305 37193412 -83090900 - MIR SINE MIR -132 130 20 2 868 356 270 72 26 chr13 37195103 37195255 -83089057 - MIR SINE MIR -5 257 99 2 868 288 0 0 0 chr13 37195462 37195494 -83088818 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3 868 324 0 0 0 chr13 37196377 37196413 -83087899 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 868 235 122 20 20 chr13 37196414 37196464 -83087848 + GA-rich Low_complexity Low_complexity 1 50 0 3 868 207 0 0 0 chr13 37196703 37196726 -83087586 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 868 254 160 60 0 chr13 37196953 37197003 -83087309 - RLTR4_MM-int LTR ERV1 -4930 2671 2619 3 868 729 255 16 31 chr13 37197304 37197559 -83086753 - L1MC3 LINE L1 -1 7784 7534 3 868 541 320 95 50 chr13 37197571 37197930 -83086382 - MTEa LTR MaLR -4 375 1 3 868 650 284 27 54 chr13 37197936 37198196 -83086116 - L1MC3 LINE L1 -261 7524 7272 3 868 218 302 130 19 chr13 37198634 37198742 -83085570 - MIRb SINE MIR -17 251 132 3 868 332 329 40 10 chr13 37199200 37199414 -83084898 + L1M5 LINE L1 5255 5480 -760 3 868 287 164 16 0 chr13 37201214 37201275 -83083037 + (TTG)n Simple_repeat Simple_repeat 2 63 0 3 868 362 284 55 39 chr13 37201283 37201411 -83082901 - RSINE1 SINE B4 -33 132 3 3 868 287 292 154 13 chr13 37202072 37202221 -83082091 + L2 LINE L2 2671 2840 -579 3 868 390 363 88 31 chr13 37202238 37202643 -83081669 - L2a LINE L2 -272 3154 2716 3 868 681 215 56 30 chr13 37203998 37204195 -83080117 - MER20 DNA MER1_type -8 211 10 3 868 2218 208 104 21 chr13 37204425 37205031 -83079281 + RMER13A LTR ERVK 12 676 -232 3 868 437 282 14 27 chr13 37205054 37205200 -83079112 + L1MB3 LINE L1 6038 6181 -2 3 868 829 294 88 11 chr13 37206861 37207133 -83077179 + ORR1D2 LTR MaLR 78 370 0 3 868 301 312 27 27 chr13 37208360 37208508 -83075804 + CT-rich Low_complexity Low_complexity 1 148 0 3 868 696 294 133 16 chr13 37208844 37209152 -83075160 + MLT1B LTR MaLR 36 379 -11 3 868 362 278 0 0 chr13 37209656 37209728 -83074584 - B1F SINE Alu -71 78 7 3 868 315 214 70 23 chr13 37209928 37210014 -83074298 - L1MA7 LINE L1 -69 6222 6133 3 868 857 312 58 23 chr13 37210543 37210891 -83073421 - MLT1B LTR MaLR -8 382 23 3 868 382 327 57 0 chr13 37211406 37211565 -83072747 - MER3 DNA MER1_type -22 187 20 3 868 22 0 0 0 chr13 37212089 37212111 -83072201 + AT_rich Low_complexity Low_complexity 1 22 0 3 868 4507 52 24 13 chr13 37212956 37213503 -83070809 + L1Md_F2 LINE L1 6030 6582 0 3 868 743 321 48 7 chr13 37213803 37214108 -83070204 - L1M3 LINE L1 -846 5300 4983 3 868 348 83 0 0 chr13 37214108 37214156 -83070156 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 868 743 308 50 6 chr13 37214156 37214218 -83070094 - L1M3 LINE L1 -1158 4982 4914 3 868 387 311 38 24 chr13 37214220 37214431 -83069881 + L1MB4 LINE L1 5534 5747 -421 3 868 1023 90 0 0 chr13 37214437 37214581 -83069731 + (GAAA)n Simple_repeat Simple_repeat 2 145 0 3 868 514 282 88 19 chr13 37214623 37214782 -83069530 + B4 SINE B4 54 223 -69 3 868 243 0 0 0 chr13 37214782 37214809 -83069503 + (A)n Simple_repeat Simple_repeat 1 27 0 3 868 326 229 57 0 chr13 37214809 37214879 -83069433 + B4 SINE B4 215 288 -4 3 868 565 156 11 0 chr13 37214913 37215003 -83069309 + B1_Mus2 SINE Alu 17 107 -40 3 868 270 0 0 0 chr13 37215003 37215033 -83069279 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 3 868 298 219 212 103 chr13 37215066 37215357 -83068955 + L1MB4 LINE L1 5768 6096 -93 3 868 9194 190 59 29 chr13 37215994 37217414 -83066898 - Lx6 LINE L1 -897 6563 5084 3 868 447 19 0 0 chr13 37217414 37217466 -83066846 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 868 9194 148 69 30 chr13 37217466 37217905 -83066407 - Lx6 LINE L1 -797 5083 4631 3 868 198 0 0 0 chr13 37217905 37217927 -83066385 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 3 868 9194 148 69 30 chr13 37217927 37218502 -83065810 - Lx6 LINE L1 -1250 4630 4050 3 868 677 186 0 58 chr13 37218489 37218626 -83065686 + Lx6 LINE L1 6674 6802 -658 3 868 1068 173 4 154 chr13 37218626 37218886 -83065426 + RMER19B LTR ERVK 1 221 -681 3 868 2709 179 75 10 chr13 37218898 37219416 -83064896 + RMER19B LTR ERVK 339 890 -12 3 868 3635 224 9 11 chr13 37219422 37220081 -83064231 + Lx6 LINE L1 6793 7450 -10 3 868 25 31 0 0 chr13 37220083 37220115 -83064197 + AT_rich Low_complexity Low_complexity 1 32 0 3 868 1405 262 44 20 chr13 37220670 37220953 -83063359 - MTD LTR MaLR -20 399 115 3 868 276 30 0 0 chr13 37220953 37220986 -83063326 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 868 1405 262 44 20 chr13 37220986 37221092 -83063220 - MTD LTR MaLR -305 114 2 3 868 215 245 20 0 chr13 37221234 37221283 -83063029 + GA-rich Low_complexity Low_complexity 5 54 0 3 868 296 111 0 18 chr13 37221302 37221357 -83062955 + (GAA)n Simple_repeat Simple_repeat 2 55 0 3 868 1518 136 0 21 chr13 37221434 37221674 -83062638 - Lx2 LINE L1 -1 6996 6762 3 868 214 250 0 35 chr13 37223057 37223115 -83061197 + L2 LINE L2 1944 1999 -1420 3 868 445 322 16 0 chr13 37223160 37223281 -83061031 + B4A SINE B4 3 125 -167 3 868 1216 143 108 5 chr13 37223300 37223504 -83060808 + URR1B DNA MER1_type 1 225 0 3 868 223 313 63 63 chr13 37224026 37224217 -83060095 + L2 LINE L2 1848 2038 -1381 3 108 328 320 131 45 chr13 37224440 37224708 -83059604 + LTR16C LTR ERVL 175 465 -24 3 869 662 330 114 55 chr13 37224735 37225155 -83059157 + MLT1H LTR MaLR 10 454 -95 3 869 1255 380 70 31 chr13 37226075 37227258 -83057054 + ERVL-int LTR ERVL 1905 3133 -2624 3 869 281 295 100 25 chr13 37228237 37228397 -83055915 + MERVL-int LTR ERVL 4727 4898 -587 3 869 258 355 14 21 chr13 37228443 37228584 -83055728 + MERVL-int LTR ERVL 4864 5003 -664 3 869 208 355 44 11 chr13 37230041 37230132 -83054180 + MIRb SINE MIR 117 210 -58 3 869 251 255 107 10 chr13 37230144 37230247 -83054065 + L1M5 LINE L1 3306 3418 -2728 3 869 232 375 0 0 chr13 37230248 37230312 -83054000 + ID4_ SINE ID 15 78 -5 3 869 433 32 16 16 chr13 37232140 37232204 -83052108 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 869 27 0 0 0 chr13 37232435 37232462 -83051850 + AT_rich Low_complexity Low_complexity 1 27 0 3 869 817 250 96 15 chr13 37232465 37232664 -83051648 + B3 SINE B2 1 215 -1 3 869 357 361 41 24 chr13 37232897 37233067 -83051245 - RMER15 LTR ERVL -55 520 348 3 869 463 332 85 15 chr13 37233338 37233426 -83050886 - RMER5 LTR ERV1 -70 464 375 3 869 1070 23 0 8 chr13 37233426 37233560 -83050752 + (GAA)n Simple_repeat Simple_repeat 3 135 0 3 869 463 332 85 15 chr13 37233560 37233670 -83050642 - RMER5 LTR ERV1 -160 374 253 3 869 830 250 20 5 chr13 37233976 37234177 -83050135 + B3 SINE B2 3 206 -10 3 869 1055 165 197 0 chr13 37234796 37234984 -83049328 + URR1B DNA MER1_type 1 225 0 3 869 213 94 0 0 chr13 37235392 37235424 -83048888 + (CTTG)n Simple_repeat Simple_repeat 4 35 0 3 869 272 243 60 157 chr13 37235529 37235695 -83048617 - B4A SINE B4 -141 151 2 3 869 432 0 0 0 chr13 37236349 37236397 -83047915 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 869 264 111 0 0 chr13 37236910 37236955 -83047357 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 869 661 223 7 37 chr13 37237274 37237409 -83046903 - RSINE1 SINE B4 -33 132 2 3 869 1794 202 62 57 chr13 37237643 37238178 -83046134 - RLTR31A_Mm LTR ERVK 0 561 1 3 869 234 111 0 0 chr13 37238186 37238222 -83046090 + B4A SINE B4 109 144 -148 3 869 988 161 51 56 chr13 37238586 37238742 -83045570 + URR1B DNA MER1_type 1 163 -62 3 869 3846 34 13 114 chr13 37238742 37239270 -83045042 + IAPLTR2_Mm LTR ERVK 1 475 0 3 869 988 161 51 56 chr13 37239270 37239310 -83045002 + URR1B DNA MER1_type 164 196 -29 3 869 1207 62 0 7 chr13 37239310 37239455 -83044857 + B1_Mm SINE Alu 3 146 -1 3 869 350 167 0 15 chr13 37240534 37240601 -83043711 + PB1D10 SINE Alu 52 117 0 3 869 534 207 5 27 chr13 37240805 37240989 -83043323 + CT-rich Low_complexity Low_complexity 1 180 0 3 869 932 266 95 40 chr13 37241042 37241391 -83042921 + Tigger6a DNA MER2_type 6 373 -710 3 869 615 269 7 0 chr13 37241392 37241533 -83042779 + ID_B1 SINE B4 81 222 -2 3 869 265 419 25 8 chr13 37241567 37241685 -83042627 + B1F SINE Alu 15 134 -15 3 869 1133 303 79 39 chr13 37241723 37242368 -83041944 + Tigger6a DNA MER2_type 350 1020 -63 3 869 28 29 0 0 chr13 37242611 37242646 -83041666 + AT_rich Low_complexity Low_complexity 1 35 0 3 869 21 0 0 0 chr13 37242751 37242772 -83041540 + AT_rich Low_complexity Low_complexity 1 21 0 3 869 656 271 144 24 chr13 37242833 37243124 -83041188 + MER2 DNA MER2_type 20 345 0 3 869 822 236 48 24 chr13 37244673 37244881 -83039431 + B3 SINE B2 2 214 -2 3 869 584 231 62 20 chr13 37244980 37245126 -83039186 - B3A SINE B2 -46 152 1 3 869 252 167 14 57 chr13 37245158 37245228 -83039084 - MLT1A LTR MaLR -249 125 59 3 869 351 267 64 40 chr13 37245325 37245450 -83038862 + Charlie4z DNA MER1_type 24 151 -16 3 869 322 317 124 32 chr13 37245826 37246012 -83038300 - ORR1E LTR MaLR -105 254 52 3 869 327 372 95 14 chr13 37247099 37247309 -83037003 - LTR16B LTR ERVL -90 373 147 3 869 786 317 43 63 chr13 37248485 37248832 -83035480 - MTE2a LTR MaLR 0 379 40 3 869 545 235 0 85 chr13 37248853 37248969 -83035343 + PB1D9 SINE Alu 1 109 -11 3 869 342 0 0 0 chr13 37248969 37249007 -83035305 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 869 545 235 0 85 chr13 37249007 37249020 -83035292 + PB1D9 SINE Alu 110 119 -1 3 869 648 244 106 37 chr13 37249798 37250015 -83034297 - MTEa LTR MaLR -37 342 111 3 869 432 0 0 0 chr13 37250516 37250564 -83033748 + (GA)n Simple_repeat Simple_repeat 2 49 0 3 869 459 0 0 0 chr13 37251402 37251453 -83032859 + (TTTTA)n Simple_repeat Simple_repeat 1 51 0 3 869 797 290 77 29 chr13 37251892 37252269 -83032043 - L1MC3 LINE L1 -55 7730 7336 3 869 601 270 155 33 chr13 37252537 37252904 -83031408 - L1MC3 LINE L1 -835 6950 6539 3 869 328 212 185 8 chr13 37253119 37253238 -83031074 - L1MC LINE L1 -766 5380 5241 3 869 23 54 0 0 chr13 37253251 37253288 -83031024 + AT_rich Low_complexity Low_complexity 1 37 0 3 869 668 269 59 8 chr13 37253335 37253571 -83030741 - L1MC LINE L1 -923 5223 4976 3 869 1387 268 35 29 chr13 37253564 37254083 -83030229 - L1MC LINE L1 -1397 4749 4228 3 869 1000 111 94 50 chr13 37254125 37254306 -83030006 - B2_Mm2 SINE B2 -5 190 2 3 869 240 299 0 0 chr13 37254322 37254389 -83029923 - L1MD LINE L1 -1917 4229 4163 3 869 303 239 99 0 chr13 37254426 37254497 -83029815 - ID4_ SINE ID 0 83 6 3 869 247 291 16 113 chr13 37254509 37254633 -83029679 - PB1D10 SINE Alu -2 115 4 3 869 1323 277 143 16 chr13 37254634 37255265 -83029047 - L1MC LINE L1 -1984 4162 3452 3 869 225 94 0 0 chr13 37255308 37255340 -83028972 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 4 869 207 0 0 0 chr13 37256526 37256549 -83027763 + (TGGG)n Simple_repeat Simple_repeat 2 24 0 4 869 334 0 43 0 chr13 37256552 37256598 -83027714 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 4 869 412 336 62 42 chr13 37256692 37257353 -83026959 + L1M5 LINE L1 4040 4713 -1433 4 869 420 283 10 0 chr13 37257567 37257666 -83026646 + PB1D10 SINE Alu 3 102 -15 4 869 954 144 0 16 chr13 37258514 37258697 -83025615 + CT-rich Low_complexity Low_complexity 1 180 0 4 869 488 229 0 35 chr13 37258815 37258928 -83025384 + L1MB4 LINE L1 5455 5563 -608 4 869 39308 10 1 2 chr13 37258930 37265312 -83019000 + L1Md_A LINE L1 1 5586 -297 4 869 9619 3 0 0 chr13 37265312 37266308 -83018004 + L1Md_A LINE L1 5587 6582 0 4 869 509 325 37 8 chr13 37266310 37266411 -83017901 + L1MB4 LINE L1 5552 5652 -531 4 869 291 28 0 0 chr13 37266411 37266447 -83017865 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 869 509 299 62 9 chr13 37266447 37266603 -83017709 + L1MB4 LINE L1 5653 5816 -340 4 869 717 287 26 76 chr13 37266614 37266703 -83017609 + B4A SINE B4 8 88 -204 4 869 1193 77 0 0 chr13 37266703 37266846 -83017466 + B1_Mus1 SINE Alu 1 143 -5 4 869 717 287 26 76 chr13 37266846 37267020 -83017292 + B4A SINE B4 89 258 -34 4 869 336 244 125 8 chr13 37267026 37267146 -83017166 + L1MA4 LINE L1 5798 5931 -369 4 869 346 279 83 61 chr13 37267399 37267628 -83016684 + L1MB7 LINE L1 5808 6041 -143 4 869 232 325 26 0 chr13 37267692 37267806 -83016506 + L1MB4 LINE L1 6049 6165 -15 4 869 468 0 0 0 chr13 37267806 37267858 -83016454 + (CATA)n Simple_repeat Simple_repeat 3 54 0 4 869 378 343 56 0 chr13 37268341 37268484 -83015828 + MLT1H1 LTR MaLR 1 151 -404 4 869 241 273 0 0 chr13 37268834 37268889 -83015423 - Tigger7 DNA MER2_type -12 2479 2425 4 869 593 325 72 24 chr13 37268930 37269179 -83015133 - Tigger7 DNA MER2_type -2228 263 3 4 869 1299 249 96 0 chr13 37270302 37270741 -83013571 - MTE-int LTR MaLR 0 1580 1063 4 869 632 203 51 0 chr13 37270780 37270918 -83013394 - MTE-int LTR MaLR -809 771 627 4 869 1384 262 102 8 chr13 37270935 37271297 -83013015 - MTE-int LTR MaLR -1184 396 1 4 869 1573 59 5 0 chr13 37271349 37271536 -83012776 + B2_Mm1a SINE B2 1 188 -5 4 869 21 36 0 0 chr13 37271552 37271580 -83012732 + AT_rich Low_complexity Low_complexity 1 28 0 4 869 1082 231 52 137 chr13 37271580 37271961 -83012351 - MTEb LTR MaLR -30 349 1 4 869 1117 132 28 11 chr13 37272283 37272459 -83011853 + B2_Mm2 SINE B2 4 182 -13 4 869 388 109 13 18 chr13 37272489 37272554 -83011758 + B2_Mm2 SINE B2 46 115 -83 4 869 297 0 0 0 chr13 37272570 37272603 -83011709 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 4 869 251 268 0 18 chr13 37273969 37274026 -83010286 - tRNA-Ala-GCY_ tRNA tRNA -19 56 1 4 869 803 319 110 33 chr13 37274542 37275031 -83009281 + L1M4 LINE L1 806 1332 -5414 4 869 1169 302 98 14 chr13 37275701 37276588 -83007724 + L1M4 LINE L1 1628 2574 -4008 4 869 876 292 19 0 chr13 37276605 37276862 -83007450 - L1_Mur3 LINE L1 -3071 2809 2548 4 869 4475 283 100 43 chr13 37276860 37279166 -83005146 + L1M4 LINE L1 4036 6472 -110 4 869 1813 294 114 51 chr13 37279493 37280699 -83003613 + L1MB8 LINE L1 3868 5149 -997 4 869 5782 51 0 0 chr13 37280700 37281367 -83002945 + L1Md_F2 LINE L1 5916 6582 0 4 869 585 274 147 67 chr13 37281453 37281738 -83002574 - ORR1E LTR MaLR -51 308 1 4 869 531 310 62 38 chr13 37281740 37282109 -83002203 + L1MB8 LINE L1 5264 5641 -543 4 869 420 317 73 61 chr13 37282114 37282359 -83001953 + MLT1D LTR MaLR 1 248 -257 4 869 1151 99 0 0 chr13 37282367 37282509 -83001803 + B1_Mus2 SINE Alu 4 145 -2 4 869 477 0 0 0 chr13 37282509 37282562 -83001750 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 869 487 288 74 41 chr13 37282691 37282934 -83001378 + L1MB8 LINE L1 5646 5896 -282 4 869 4671 55 48 3 chr13 37282966 37283531 -83000781 - L1Md_F2 LINE L1 -2 6580 5991 4 869 261 276 165 41 chr13 37283642 37283763 -83000549 + MLT1A1 LTR MaLR 45 180 -228 4 869 227 195 0 0 chr13 37283883 37283924 -83000388 + (TATG)n Simple_repeat Simple_repeat 4 44 0 4 869 425 151 122 93 chr13 37284546 37284685 -82999627 - Lx4A LINE L1 0 7058 6916 4 869 732 200 0 0 chr13 37284700 37284865 -82999447 + (CA)n Simple_repeat Simple_repeat 2 166 0 4 869 228 184 0 0 chr13 37285323 37285372 -82998940 + CT-rich Low_complexity Low_complexity 2 50 0 4 869 340 259 17 8 chr13 37285387 37285504 -82998808 + CT-rich Low_complexity Low_complexity 1 118 0 4 869 404 261 200 42 chr13 37285826 37285993 -82998319 - RMER15 LTR ERVL 0 575 386 4 869 2929 160 30 36 chr13 37285993 37286493 -82997819 + RLTR19 LTR ERVK 1 497 -2 4 869 404 261 200 42 chr13 37286493 37286585 -82997727 - RMER15 LTR ERVL -190 385 275 4 869 309 322 124 55 chr13 37286867 37287084 -82997228 - HAL1-3A_ME LINE L1 -652 2206 1975 4 869 212 185 19 0 chr13 37287286 37287340 -82996972 + CT-rich Low_complexity Low_complexity 5 59 0 4 869 576 302 0 0 chr13 37287368 37287487 -82996825 - RSINE1 SINE B4 -45 120 2 4 869 1242 82 0 0 chr13 37287597 37287743 -82996569 + B1_Mus2 SINE Alu 2 147 0 4 869 668 257 117 48 chr13 37287748 37287936 -82996376 - B3 SINE B2 -14 202 2 4 869 329 379 0 0 chr13 37289629 37289724 -82994588 + ID_B1 SINE B4 113 207 -17 4 869 259 325 0 25 chr13 37289800 37289879 -82994433 + polypurine Low_complexity Low_complexity 3 79 0 4 869 477 0 0 0 chr13 37290363 37290416 -82993896 + (TC)n Simple_repeat Simple_repeat 1 53 0 4 869 1185 170 45 22 chr13 37290430 37290653 -82993659 - MTB_Mm LTR MaLR -179 228 1 4 869 202 227 0 0 chr13 37290659 37290703 -82993609 + A-rich Low_complexity Low_complexity 3 46 0 4 869 539 207 72 0 chr13 37291856 37291967 -82992345 - RSINE1 SINE B4 0 165 47 4 869 266 195 35 0 chr13 37292830 37292914 -82991398 + L1MA8 LINE L1 5999 6087 -204 4 869 23 0 0 0 chr13 37293001 37293024 -82991288 + AT_rich Low_complexity Low_complexity 1 23 0 4 869 399 253 0 0 chr13 37293107 37293194 -82991118 + MTEb LTR MaLR 288 374 -5 4 869 1227 266 27 14 chr13 37294534 37294827 -82989485 + ORR1D2 LTR MaLR 1 297 -73 4 869 4134 248 78 84 chr13 37294831 37295191 -82989121 + ORR1D2-int LTR MaLR 1 336 -1034 4 869 941 254 29 0 chr13 37295191 37295400 -82988912 - B3 SINE B2 0 216 2 4 869 4134 248 78 84 chr13 37295400 37296417 -82987895 + ORR1D2-int LTR MaLR 337 1370 0 4 869 1576 240 42 8 chr13 37296422 37296775 -82987537 + ORR1D2 LTR MaLR 6 370 0 4 869 363 274 76 23 chr13 37297624 37297755 -82986557 + MLT1H2 LTR MaLR 352 489 0 4 869 2167 112 31 19 chr13 37298229 37298548 -82985764 - ORR1A3 LTR MaLR 0 326 4 4 869 957 306 44 26 chr13 37298848 37299120 -82985192 + B4A SINE B4 8 284 -8 4 869 2235 80 46 61 chr13 37299692 37300038 -82984274 - Lx LINE L1 -13 6641 6301 4 869 2681 92 54 0 chr13 37300039 37300408 -82983904 + Lx LINE L1 5900 6288 -366 4 869 330 306 65 59 chr13 37300759 37300929 -82983383 - MIRb SINE MIR -76 192 22 4 869 384 77 0 0 chr13 37301505 37301557 -82982755 + (TA)n Simple_repeat Simple_repeat 2 53 0 4 869 22 35 0 0 chr13 37301586 37301615 -82982697 + AT_rich Low_complexity Low_complexity 1 29 0 4 869 674 211 6 0 chr13 37301638 37301813 -82982499 + (TA)n Simple_repeat Simple_repeat 2 177 0 4 869 357 254 0 0 chr13 37301940 37302011 -82982301 + B3A SINE B2 5 75 -123 4 869 7315 91 23 21 chr13 37302025 37303177 -82981135 - L1_Mus3 LINE L1 -4 6634 5481 4 869 8093 130 51 3 chr13 37303168 37304759 -82979553 - L1_Mus3 LINE L1 -911 4969 3108 4 869 380 244 53 43 chr13 37304759 37304853 -82979459 + B3A SINE B2 54 148 -50 4 869 357 82 0 0 chr13 37304853 37304902 -82979410 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 869 296 290 21 21 chr13 37304957 37305052 -82979260 - Tigger7 DNA MER2_type -1452 1039 945 4 869 980 310 42 32 chr13 37305029 37305342 -82978970 - Tigger7 DNA MER2_type -2160 331 16 4 869 313 296 208 19 chr13 37305363 37305552 -82978760 - MIRc SINE MIR -31 237 17 4 869 432 211 48 24 chr13 37305637 37305763 -82978549 + Lx9 LINE L1 7500 7628 -16 4 869 386 277 114 44 chr13 37305871 37306143 -82978169 + L1ME4a LINE L1 5789 6079 -45 4 869 602 296 59 17 chr13 37306178 37306415 -82977897 + MER2 DNA MER2_type 1 247 -98 4 869 343 221 225 44 chr13 37306558 37306674 -82977638 + MIR3 SINE MIR 37 171 -105 4 869 494 343 28 47 chr13 37309753 37309967 -82974345 - RMER15 LTR ERVL -14 561 352 4 869 682 278 98 16 chr13 37310826 37311082 -82973230 + Lx9 LINE L1 7179 7455 -189 4 869 486 33 0 0 chr13 37311082 37311142 -82973170 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 869 26 0 0 0 chr13 37311237 37311263 -82973049 + AT_rich Low_complexity Low_complexity 1 26 0 4 869 1040 261 20 37 chr13 37311299 37311593 -82972719 + B4A SINE B4 4 292 0 4 869 345 287 0 69 chr13 37312813 37312914 -82971398 + PB1D10 SINE Alu 17 110 -7 4 869 205 250 10 20 chr13 37313414 37313512 -82970800 + GA-rich Low_complexity Low_complexity 3 99 0 4 869 6013 37 1 0 chr13 37313564 37314236 -82970076 + L1Md_T LINE L1 5910 6582 0 4 869 7693 71 27 1 chr13 37314236 37315549 -82968763 + Lx3_Mus LINE L1 4865 6209 -800 4 869 3137 194 40 20 chr13 37315607 37316240 -82968072 + Lx5 LINE L1 6406 7050 0 4 869 335 358 32 32 chr13 37316296 37316420 -82967892 + B1F SINE Alu 1 124 -25 4 869 1432 295 78 59 chr13 37316420 37317134 -82967178 - Lx8 LINE L1 -720 6753 6026 4 869 2306 83 3 3 chr13 37317247 37317561 -82966751 - ORR1A2 LTR MaLR -13 314 1 4 869 2118 245 54 22 chr13 37317563 37318158 -82966154 - Lx8 LINE L1 -1773 5923 5313 4 869 842 274 9 0 chr13 37318173 37318399 -82965913 + Lx8 LINE L1 6741 6968 -505 4 869 364 311 118 40 chr13 37318434 37318782 -82965530 + L1ME3 LINE L1 5679 6053 -109 4 869 596 287 43 70 chr13 37319496 37319683 -82964629 + B3A SINE B2 1 182 -16 4 869 405 0 0 0 chr13 37319690 37319735 -82964577 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 869 378 289 117 42 chr13 37320267 37320531 -82963781 + L1MA6 LINE L1 5891 6174 -126 4 869 308 261 33 22 chr13 37320534 37320624 -82963688 + B4A SINE B4 157 247 -45 4 869 437 97 14 0 chr13 37320634 37320706 -82963606 + (CA)n Simple_repeat Simple_repeat 1 73 0 4 869 207 0 0 0 chr13 37320751 37320774 -82963538 + (A)n Simple_repeat Simple_repeat 1 23 0 4 869 506 313 22 7 chr13 37322193 37322328 -82961984 + ID_B1 SINE B4 88 224 0 4 869 941 269 148 85 chr13 37324058 37324492 -82959820 + MT2B LTR ERVL 2 543 -58 4 869 284 44 44 0 chr13 37324492 37324537 -82959775 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 4 869 941 289 45 49 chr13 37324537 37324562 -82959750 + MT2B LTR ERVL 544 562 -39 4 869 251 217 48 0 chr13 37324562 37324645 -82959667 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 4 869 255 143 0 0 chr13 37324650 37324692 -82959620 + MT2B LTR ERVL 543 584 0 4 869 309 327 10 0 chr13 37325893 37325997 -82958315 + MLT1D LTR MaLR 401 505 0 4 869 3686 18 4 132 chr13 37326596 37327096 -82957216 + RLTR10C LTR ERVK 1 436 0 4 869 1878 208 178 36 chr13 37327325 37328104 -82956208 - RMER6C LTR ERVK 0 720 1 5 869 279 253 25 0 chr13 37328533 37328612 -82955700 + CT-rich Low_complexity Low_complexity 2 82 0 5 869 243 0 0 0 chr13 37329257 37329284 -82955028 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 869 185 354 70 10 chr13 37330928 37331028 -82953284 + MIRm SINE MIR 167 272 -4 5 869 391 303 59 110 chr13 37332224 37332580 -82951732 + ORR1E LTR MaLR 9 346 -13 5 869 357 24 0 0 chr13 37333638 37333680 -82950632 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 869 398 322 110 53 chr13 37333702 37333983 -82950329 - B4 SINE B4 -20 272 2 5 869 227 268 18 0 chr13 37335650 37335706 -82948606 + CT-rich Low_complexity Low_complexity 4 60 0 5 869 282 180 0 0 chr13 37335735 37335796 -82948516 + CT-rich Low_complexity Low_complexity 3 63 0 5 869 541 216 89 9 chr13 37335799 37335911 -82948401 - B1_Mur1 SINE Alu -5 144 24 5 869 325 312 82 45 chr13 37335911 37335931 -82948381 - ID_B1 SINE B4 -3 219 83 5 869 504 95 0 0 chr13 37336162 37336246 -82948066 + (TC)n Simple_repeat Simple_repeat 1 84 0 5 869 1228 68 7 0 chr13 37336372 37336518 -82947794 - B1_Mm SINE Alu 0 147 1 5 869 655 174 141 0 chr13 37337239 37337360 -82946952 + B1_Mur4 SINE Alu 2 139 -11 5 869 269 0 56 0 chr13 37337360 37337396 -82946916 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 5 869 300 333 135 25 chr13 37337452 37337689 -82946623 + HAL1 LINE L1 813 1075 -1432 5 869 552 313 193 3 chr13 37338355 37338640 -82945672 - MER2 DNA MER2_type -6 339 1 5 869 372 293 30 0 chr13 37338835 37338934 -82945378 + PB1D10 SINE Alu 13 114 -3 5 869 212 285 171 42 chr13 37339320 37339536 -82944776 - L2 LINE L2 -827 2592 2349 5 869 356 355 0 16 chr13 37339796 37339922 -82944390 - MLT1I LTR MaLR -2 409 286 5 869 288 350 63 19 chr13 37340079 37340227 -82944085 - MLT1I LTR MaLR -291 157 1 5 869 227 244 0 0 chr13 37342585 37342630 -82941682 - RMER30 DNA MER1_type -151 51 7 5 869 3560 262 79 23 chr13 37342905 37343891 -82940421 + Lx8 LINE L1 6261 7301 -172 5 869 372 238 0 0 chr13 37344249 37344354 -82939958 + (CATATA)n Simple_repeat Simple_repeat 4 108 0 5 869 616 271 48 7 chr13 37344753 37344898 -82939414 - RSINE1 SINE B4 -11 154 4 5 869 2236 164 44 0 chr13 37345918 37346092 -82938220 + ORR1C2 LTR MaLR 2 189 -195 5 869 351 0 0 0 chr13 37346092 37346131 -82938181 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 869 2236 164 44 0 chr13 37346131 37346323 -82937989 + ORR1C2 LTR MaLR 190 383 -1 5 869 402 271 113 7 chr13 37346468 37346609 -82937703 + L1_Mur3 LINE L1 65 220 -7508 5 869 401 188 102 20 chr13 37346614 37346712 -82937600 + L1_Mur3 LINE L1 381 486 -7242 5 869 1592 172 22 13 chr13 37347064 37347381 -82936931 + L1_Mur3 LINE L1 490 809 -6919 5 869 2059 152 77 50 chr13 37347382 37347666 -82936646 - MTC LTR MaLR -8 413 106 5 869 911 157 7 0 chr13 37347666 37347806 -82936506 + B1_Mus1 SINE Alu 1 141 -7 5 869 2059 152 77 50 chr13 37347806 37347923 -82936389 - MTC LTR MaLR -316 105 1 5 869 2503 139 61 9 chr13 37347934 37348376 -82935936 + L1_Mur3 LINE L1 818 1282 -6446 5 869 373 233 74 46 chr13 37348376 37348484 -82935828 + MT2B LTR ERVL 147 257 -344 5 869 422 198 8 75 chr13 37348413 37348520 -82935792 + ID_B1 SINE B4 113 215 -9 5 869 342 0 0 0 chr13 37348520 37348558 -82935754 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 869 422 198 8 75 chr13 37348558 37348570 -82935742 + ID_B1 SINE B4 216 224 0 5 869 1630 150 45 28 chr13 37348571 37348681 -82935631 + L1_Mur3 LINE L1 1317 1422 -4458 5 869 1504 57 28 0 chr13 37348681 37348857 -82935455 + B2_Mm2 SINE B2 1 181 -14 5 869 1630 150 45 28 chr13 37348857 37349103 -82935209 + L1_Mur3 LINE L1 1423 1679 -4201 5 869 2061 207 59 22 chr13 37349103 37349509 -82934803 - MTC LTR MaLR 0 421 1 5 869 7310 100 35 15 chr13 37349509 37350669 -82933643 + Lx LINE L1 5472 6654 0 5 869 10613 156 65 125 chr13 37350678 37351066 -82933246 + Lx7 LINE L1 1669 2061 -3819 5 869 414 53 0 0 chr13 37351066 37351123 -82933189 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 869 10613 156 65 125 chr13 37351123 37352121 -82932191 + Lx7 LINE L1 2062 2981 -2899 5 869 8613 40 3 1 chr13 37352121 37353104 -82931208 + L1Md_F3 LINE L1 5588 6572 -12 5 869 10613 156 65 125 chr13 37353104 37353975 -82930337 + Lx7 LINE L1 2982 3756 -2124 5 869 2946 69 3 0 chr13 37353975 37354337 -82929975 + L1Md_F2 LINE L1 6220 6582 0 5 869 10613 156 65 125 chr13 37354337 37354869 -82929443 + Lx7 LINE L1 3757 4295 -1585 5 108 36364 47 0 3 chr13 37354862 37360318 -82923994 + L1Md_T LINE L1 56 5589 -297 5 870 8956 33 1 0 chr13 37360318 37361313 -82922999 + L1Md_T LINE L1 5590 6585 0 5 870 228 35 0 0 chr13 37361329 37361358 -82922954 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 870 7942 182 32 24 chr13 37361358 37363316 -82920996 + Lx7 LINE L1 4287 6260 -1436 5 870 303 234 0 0 chr13 37363316 37363380 -82920932 - MLT1A LTR MaLR -39 335 272 5 870 427 299 76 7 chr13 37363374 37363519 -82920793 - MLT-int LTR MaLR -235 1500 1346 5 870 582 237 11 33 chr13 37363621 37363785 -82920527 + B3 SINE B2 32 185 -10 5 870 2619 95 6 6 chr13 37363976 37364303 -82920009 + ORR1A2 LTR MaLR 1 327 0 5 870 501 127 0 0 chr13 37364417 37364496 -82919816 + (T)n Simple_repeat Simple_repeat 1 79 0 5 870 375 302 121 10 chr13 37364600 37364815 -82919497 - MLT-int LTR MaLR -902 469 241 5 870 1084 258 28 137 chr13 37365685 37366108 -82918204 - MTE2a LTR MaLR -2 377 1 5 870 856 119 406 4 chr13 37366538 37366767 -82917545 - ORR1A4 LTR MaLR -8 321 1 5 870 5245 129 26 11 chr13 37366767 37367856 -82916456 - ORR1A4-int LTR MaLR 0 1963 329 5 870 601 162 0 126 chr13 37367815 37367942 -82916370 - MT2B LTR ERVL -314 287 177 5 870 300 252 100 10 chr13 37367859 37367959 -82916353 - ID_B1 SINE B4 -40 184 76 5 870 254 333 0 0 chr13 37367968 37368049 -82916263 - L1MEc LINE L1 -3515 2804 2724 5 870 345 294 56 35 chr13 37368086 37368525 -82915787 - L1MEc LINE L1 -3661 2658 2197 5 870 347 306 8 59 chr13 37368605 37368723 -82915589 - LTR40a LTR ERVL -405 114 3 5 870 881 246 81 11 chr13 37368730 37369054 -82915258 - HERVL40-int LTR ERVL -6 5524 5259 5 870 257 370 100 12 chr13 37369881 37370130 -82914182 - HERVL40-int LTR ERVL -897 4633 4363 5 870 728 244 19 0 chr13 37370200 37370356 -82913956 - MTEb LTR MaLR -220 159 1 5 870 986 242 14 5 chr13 37371014 37371222 -82913090 + B3 SINE B2 3 212 -4 5 870 956 244 33 14 chr13 37371251 37371463 -82912849 - B3 SINE B2 0 216 1 5 870 297 0 0 0 chr13 37371959 37371992 -82912320 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 870 270 0 0 0 chr13 37372287 37372317 -82911995 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 870 363 329 0 0 chr13 37372959 37373099 -82911213 + (CTGGGG)n Simple_repeat Simple_repeat 1 140 0 5 870 765 0 0 0 chr13 37373331 37373416 -82910896 + (TTC)n Simple_repeat Simple_repeat 3 87 0 5 870 218 194 0 0 chr13 37373416 37373452 -82910860 + (CAT)n Simple_repeat Simple_repeat 1 36 0 5 870 1399 146 129 13 chr13 37373466 37373759 -82910553 - Lx3B LINE L1 -23 6950 6597 5 870 237 304 196 0 chr13 37374356 37374458 -82909854 - ORR1E LTR MaLR 0 379 258 5 870 489 297 15 56 chr13 37374508 37374704 -82909608 - ORR1E LTR MaLR -171 188 1 5 870 486 224 13 13 chr13 37376009 37376167 -82908145 + CT-rich Low_complexity Low_complexity 6 163 0 5 870 23 0 0 0 chr13 37376189 37376212 -82908100 + AT_rich Low_complexity Low_complexity 1 23 0 5 870 576 42 0 0 chr13 37377462 37377533 -82906779 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 870 489 284 19 81 chr13 37378404 37378565 -82905747 + RSINE1 SINE B4 15 165 0 5 870 2542 92 6 12 chr13 37378603 37378932 -82905380 + ORR1A2 LTR MaLR 1 327 0 5 870 825 270 68 7 chr13 37378985 37379294 -82905018 + L1MB2 LINE L1 5785 6112 -59 5 870 188 184 20 0 chr13 37379577 37379626 -82904686 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 870 235 135 0 0 chr13 37380319 37380356 -82903956 + MTA_Mm LTR MaLR 44 80 -316 5 870 316 55 69 0 chr13 37380335 37380390 -82903922 - MTA_Mm LTR MaLR -353 68 1 5 870 2188 229 58 26 chr13 37380704 37381277 -82903035 + Lx7 LINE L1 6761 7351 -345 5 870 315 85 0 0 chr13 37381278 37381325 -82902987 + (ATTG)n Simple_repeat Simple_repeat 1 47 0 5 870 470 70 14 0 chr13 37381352 37381423 -82902889 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 870 685 213 7 7 chr13 37382147 37382289 -82902023 + B3 SINE B2 70 211 -5 5 870 464 326 46 17 chr13 37383668 37383843 -82900469 + B3A SINE B2 1 180 -18 5 870 2718 270 34 55 chr13 37383851 37384753 -82899559 + Lx8 LINE L1 6140 7022 -451 5 870 717 265 76 5 chr13 37384781 37385005 -82899307 + Lx8 LINE L1 7132 7371 -102 5 870 3090 291 50 24 chr13 37385002 37385516 -82898796 - Lx8 LINE L1 -330 7143 6636 5 870 2386 89 40 6 chr13 37385516 37385842 -82898470 + L1_Mus4 LINE L1 6297 6633 -3 5 870 3090 291 50 24 chr13 37385842 37386197 -82898115 - Lx8 LINE L1 -838 6635 6261 5 870 288 0 0 0 chr13 37386197 37386229 -82898083 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 870 3090 291 50 24 chr13 37386229 37386365 -82897947 - Lx8 LINE L1 -1213 6260 6112 5 870 234 296 30 20 chr13 37386953 37387053 -82897259 + L1M5 LINE L1 5447 5547 -647 5 870 1244 129 115 34 chr13 37387965 37388174 -82896138 + URR1A DNA MER1_type 1 226 0 5 870 602 252 36 68 chr13 37388654 37388875 -82895437 + B3 SINE B2 1 214 -2 5 870 304 303 55 0 chr13 37388884 37388993 -82895319 - MLT1F2 LTR MaLR 0 560 446 5 870 244 229 0 0 chr13 37389372 37389433 -82894879 + A-rich Low_complexity Low_complexity 1 61 0 5 870 180 0 0 0 chr13 37390924 37390944 -82893368 + (GCTG)n Simple_repeat Simple_repeat 1 20 0 5 870 248 294 27 27 chr13 37392067 37392179 -82892133 + L3 LINE CR1 3961 4072 -417 5 870 379 296 97 21 chr13 37392621 37392766 -82891546 + RSINE1 SINE B4 2 157 -8 5 870 574 294 11 17 chr13 37393559 37393739 -82890573 + B4A SINE B4 1 179 -113 5 870 716 196 0 51 chr13 37393783 37393939 -82890373 - B1_Mur3 SINE Alu 0 149 2 5 870 411 247 18 96 chr13 37395618 37395784 -82888528 - RSINE1 SINE B4 0 165 13 5 870 288 0 0 0 chr13 37397425 37397457 -82886855 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 5 870 208 140 60 0 chr13 37397911 37397961 -82886351 + (GTTTG)n Simple_repeat Simple_repeat 2 54 0 5 870 205 300 0 16 chr13 37398236 37398297 -82886015 + CT-rich Low_complexity Low_complexity 3 62 0 5 870 342 0 0 0 chr13 37398328 37398366 -82885946 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 870 341 296 10 10 chr13 37399318 37399417 -82884895 - PB1D7 SINE Alu 0 120 22 5 870 236 179 0 51 chr13 37399956 37400015 -82884297 - L1MC1 LINE L1 -10 6323 6268 5 870 1208 289 61 41 chr13 37400109 37400664 -82883648 - L1MC2 LINE L1 -213 6131 5566 5 870 369 352 45 0 chr13 37401130 37401306 -82883006 - L1MEg LINE L1 -5673 411 228 5 870 354 23 0 0 chr13 37401894 37401937 -82882375 + (A)n Simple_repeat Simple_repeat 1 43 0 5 870 22 0 0 0 chr13 37402201 37402223 -82882089 + GC_rich Low_complexity Low_complexity 1 22 0 6 870 207 0 0 0 chr13 37402739 37402762 -82881550 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 870 221 188 0 20 chr13 37402884 37402933 -82881379 + C-rich Low_complexity Low_complexity 1 48 0 6 870 205 27 81 0 chr13 37405564 37405601 -82878711 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 6 870 212 290 14 0 chr13 37405761 37405830 -82878482 + (TA)n Simple_repeat Simple_repeat 1 70 0 6 870 250 286 31 52 chr13 37406089 37406185 -82878127 + PB1D10 SINE Alu 17 110 -7 6 870 1186 174 5 0 chr13 37406654 37406867 -82877445 + B3 SINE B2 3 216 0 6 870 532 301 39 55 chr13 37407196 37407505 -82876807 + HAL1 LINE L1 2048 2351 -156 6 870 489 257 0 0 chr13 37407913 37408022 -82876290 - PB1D10 SINE Alu -6 111 3 6 870 611 288 77 56 chr13 37408756 37409095 -82875217 + ORR1E LTR MaLR 9 354 -5 6 870 245 309 113 44 chr13 37409188 37409347 -82874965 - MLT1A1 LTR MaLR -238 170 1 6 870 1525 135 5 0 chr13 37409475 37409697 -82874615 + URR1B DNA MER1_type 1 223 -2 6 870 570 240 110 0 chr13 37411667 37411813 -82872499 + RSINE1 SINE B4 4 165 0 6 870 4417 69 2 2 chr13 37412572 37413140 -82871172 + L1_Mus4 LINE L1 6069 6636 0 6 870 284 150 176 69 chr13 37414462 37414570 -82869742 - Lx8 LINE L1 0 7473 7363 6 870 204 40 0 0 chr13 37414570 37414595 -82869717 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 870 230 283 65 0 chr13 37414599 37414691 -82869621 - Lx8 LINE L1 -157 7316 7219 6 870 289 290 100 44 chr13 37415232 37415443 -82868869 - L1MD2 LINE L1 -80 6279 6058 6 870 225 0 0 0 chr13 37415443 37415468 -82868844 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 870 289 290 100 44 chr13 37415468 37415527 -82868785 - L1MD2 LINE L1 -302 6057 5994 6 870 484 287 220 12 chr13 37415982 37416574 -82867738 - L1MD2 LINE L1 -805 5341 4627 6 870 30 27 0 0 chr13 37416770 37416807 -82867505 + AT_rich Low_complexity Low_complexity 1 37 0 6 870 3776 73 8 21 chr13 37416935 37417465 -82866847 - L1_Mus3 LINE L1 0 6638 6116 6 870 2582 95 0 50 chr13 37419691 37420069 -82864243 + RLTR10D LTR ERVK 1 359 0 6 870 552 300 0 0 chr13 37420169 37420309 -82864003 + ID_B1 SINE B4 81 220 -4 6 870 345 275 133 17 chr13 37421050 37421231 -82863081 + Arthur1 DNA Tip100 509 710 -3237 6 870 390 42 0 0 chr13 37421249 37421297 -82863015 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 6 870 440 312 36 119 chr13 37421298 37421880 -82862432 + Arthur1 DNA Tip100 2863 3396 -551 6 870 1018 135 0 11 chr13 37422036 37422216 -82862096 + (GGA)n Simple_repeat Simple_repeat 3 180 0 6 870 347 0 0 23 chr13 37422216 37422260 -82862052 + (GAA)n Simple_repeat Simple_repeat 3 45 0 6 870 470 70 0 14 chr13 37423427 37423499 -82860813 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 870 1180 297 130 44 chr13 37423992 37424608 -82859704 - MER21B LTR ERV1 -192 671 3 6 870 1138 281 30 17 chr13 37425590 37425952 -82858360 + MTEa LTR MaLR 1 367 -12 6 870 1081 103 11 31 chr13 37426009 37426635 -82857677 + (TAGA)n Simple_repeat Simple_repeat 1 613 0 6 870 338 286 47 9 chr13 37427058 37427164 -82857148 - L1MB4 LINE L1 -134 6046 5937 6 870 1832 191 50 12 chr13 37427164 37427567 -82856745 + MTD LTR MaLR 1 418 -1 6 870 752 275 131 98 chr13 37427575 37428156 -82856156 - L1MB4 LINE L1 -260 5920 5321 6 870 1036 262 47 23 chr13 37429335 37429679 -82854633 - ORR1E LTR MaLR -5 354 3 6 870 269 252 62 68 chr13 37430374 37430536 -82853776 + L1M5 LINE L1 5313 5473 -651 6 870 1118 236 88 10 chr13 37431303 37431598 -82852714 + MTD LTR MaLR 6 323 -96 6 870 1703 194 102 29 chr13 37431598 37431980 -82852332 - Lx9 LINE L1 -826 6818 6409 6 870 511 280 3 3 chr13 37432829 37432951 -82851361 + B1F SINE Alu 1 123 -24 6 870 243 0 0 0 chr13 37432951 37432978 -82851334 + (CAAA)n Simple_repeat Simple_repeat 4 30 0 6 870 356 256 16 140 chr13 37432978 37433138 -82851174 + RSINE1 SINE B4 3 141 -24 6 870 194 33 67 0 chr13 37433138 37433168 -82851144 + (CATG)n Simple_repeat Simple_repeat 4 35 0 6 870 356 256 16 140 chr13 37433168 37433193 -82851119 + RSINE1 SINE B4 142 165 0 6 870 204 143 24 0 chr13 37434534 37434576 -82849736 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 870 346 265 0 12 chr13 37434693 37434777 -82849535 - PB1D10 SINE Alu -2 115 33 6 870 2131 166 29 11 chr13 37435247 37435624 -82848688 - ORR1C2 LTR MaLR 0 384 1 6 870 540 262 53 7 chr13 37436435 37436585 -82847727 + RSINE1 SINE B4 3 159 -6 6 870 24 0 0 0 chr13 37436607 37436631 -82847681 + AT_rich Low_complexity Low_complexity 1 24 0 6 870 234 0 0 0 chr13 37439941 37439967 -82844345 + (A)n Simple_repeat Simple_repeat 1 26 0 6 870 596 265 7 26 chr13 37440026 37440177 -82844135 + ID_B1 SINE B4 77 224 0 6 870 309 183 0 0 chr13 37440314 37440374 -82843938 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 6 870 278 294 23 105 chr13 37440600 37440733 -82843579 + RSINE1 SINE B4 43 164 -1 6 870 328 321 36 4 chr13 37440819 37441051 -82843261 + MLT1B LTR MaLR 60 378 -12 6 870 1251 245 14 3 chr13 37441246 37441529 -82842783 + B4 SINE B4 1 286 -6 6 870 22 0 0 0 chr13 37441559 37441581 -82842731 + AT_rich Low_complexity Low_complexity 1 22 0 6 870 300 212 0 0 chr13 37441583 37441649 -82842663 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 870 1082 143 152 10 chr13 37442121 37442319 -82841993 - URR1A DNA MER1_type 0 226 1 6 870 259 283 163 0 chr13 37442901 37442993 -82841319 + MER58B DNA MER1_type 1 107 -234 6 870 802 278 8 30 chr13 37443286 37443520 -82840792 - RMER15 LTR ERVL -68 507 279 6 870 294 232 32 89 chr13 37443518 37443641 -82840671 - RMER15 LTR ERVL -416 159 44 6 870 583 307 6 0 chr13 37443815 37443991 -82840321 + MER58B DNA MER1_type 133 309 -32 6 870 227 267 53 13 chr13 37447046 37447122 -82837190 - PB1D7 SINE Alu -28 92 14 6 870 1162 297 73 39 chr13 37448864 37449355 -82834957 - MER44B DNA MER2_type -25 525 18 6 870 2525 84 95 0 chr13 37449764 37450121 -82834191 - Lx LINE L1 -547 6107 5717 6 870 1707 204 62 50 chr13 37450211 37450736 -82833576 - BGLII_B LTR ERVK -7 434 19 6 870 351 304 65 29 chr13 37451240 37451379 -82832933 + Tigger5 DNA MER2_type 99 242 -2164 6 870 896 234 24 24 chr13 37451452 37451662 -82832650 - Lx8 LINE L1 -693 6780 6571 6 870 426 295 0 9 chr13 37452262 37452368 -82831944 - Lx8 LINE L1 -785 6688 6584 6 870 476 324 73 23 chr13 37452403 37452621 -82831691 - MLT1A0 LTR MaLR -98 267 39 6 870 233 333 80 40 chr13 37453227 37453352 -82830960 + L1MEd LINE L1 509 638 -5498 6 870 1351 90 5 26 chr13 37453686 37453880 -82830432 + B2_Mm2 SINE B2 2 191 -4 6 870 729 63 0 0 chr13 37454200 37454295 -82830017 + (TG)n Simple_repeat Simple_repeat 2 96 0 6 870 300 364 25 0 chr13 37454532 37454653 -82829659 + L1MEd LINE L1 4031 4154 -1992 6 870 1252 34 7 0 chr13 37454706 37454853 -82829459 + B1_Mus1 SINE Alu 1 148 0 6 870 441 0 0 0 chr13 37455122 37455171 -82829141 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 870 239 304 29 10 chr13 37455178 37455281 -82829031 - B1F2 SINE Alu -5 144 40 6 870 405 283 0 0 chr13 37456939 37457045 -82827267 + L1MEd LINE L1 5560 5665 -514 6 870 307 331 57 0 chr13 37457163 37457287 -82827025 + Lx8 LINE L1 7031 7161 -312 6 870 324 308 23 40 chr13 37457454 37457630 -82826682 + RMER15 LTR ERVL 357 529 -46 6 870 1203 232 45 59 chr13 37457649 37458095 -82826217 + MT2B LTR ERVL 1 538 -63 6 870 405 0 0 0 chr13 37458095 37458140 -82826172 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 870 1217 285 88 7 chr13 37459104 37459545 -82824767 - Tigger7 DNA MER2_type -2014 477 1 6 870 246 261 186 43 chr13 37460871 37461011 -82823301 + RMER30 DNA MER1_type 5 164 -38 6 870 322 276 75 88 chr13 37461470 37461617 -82822695 - MTE2a LTR MaLR -65 314 170 6 870 2216 182 7 19 chr13 37461704 37462130 -82822182 - MTC LTR MaLR 0 421 1 6 870 295 241 138 0 chr13 37462153 37462240 -82822072 - MTE2a LTR MaLR -280 99 1 6 870 435 19 0 0 chr13 37462258 37462310 -82822002 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 870 206 323 21 10 chr13 37462481 37462578 -82821734 + CT-rich Low_complexity Low_complexity 2 99 0 6 870 187 316 41 31 chr13 37464474 37464572 -82819740 + MIRb SINE MIR 55 153 -115 6 870 280 244 13 0 chr13 37464682 37464760 -82819552 - URR1B DNA MER1_type -37 188 110 6 870 410 274 91 169 chr13 37465577 37465806 -82818506 + MER2 DNA MER2_type 1 214 -131 6 870 629 216 141 36 chr13 37465806 37465998 -82818314 + B3 SINE B2 5 216 0 6 870 410 274 91 169 chr13 37465998 37466141 -82818171 + MER2 DNA MER2_type 215 344 -1 6 870 207 0 0 0 chr13 37466302 37466325 -82817987 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 870 308 269 10 0 chr13 37467160 37467264 -82817048 + GA-rich Low_complexity Low_complexity 3 107 0 6 870 954 128 0 22 chr13 37467244 37467347 -82816965 + (GGAA)n Simple_repeat Simple_repeat 1 101 0 6 870 1049 136 6 0 chr13 37467347 37467524 -82816788 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 6 870 954 128 0 22 chr13 37467524 37467604 -82816708 + (GGAA)n Simple_repeat Simple_repeat 2 80 0 6 870 925 172 4 4 chr13 37467628 37467856 -82816456 + GA-rich Low_complexity Low_complexity 1 228 0 6 870 2476 71 12 58 chr13 37469706 37470049 -82814263 + ORR1A2 LTR MaLR 1 327 0 6 870 350 359 93 0 chr13 37470387 37470677 -82813635 - MER2 DNA MER2_type -28 317 1 6 870 485 239 4 4 chr13 37470711 37470985 -82813327 + (CA)n Simple_repeat Simple_repeat 1 274 0 6 870 284 371 52 24 chr13 37471013 37471223 -82813089 - MIR SINE MIR -32 230 15 6 870 471 18 0 0 chr13 37471378 37471434 -82812878 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 870 284 320 30 96 chr13 37471490 37471625 -82812687 - B4A SINE B4 -117 175 50 6 870 1522 173 188 3 chr13 37471626 37471934 -82812378 - ORR1B2 LTR MaLR -2 365 1 6 870 3049 149 46 7 chr13 37471935 37472482 -82811830 - ORR1B2-int LTR MaLR 0 1509 942 6 870 1951 271 107 46 chr13 37472554 37472959 -82811353 - Lx9 LINE L1 -4 7640 7171 6 870 1410 45 79 0 chr13 37472959 37472977 -82811335 - B2_Mm1t SINE B2 0 193 176 6 870 186 43 0 0 chr13 37472977 37473000 -82811312 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 6 870 1410 45 79 0 chr13 37473000 37473159 -82811153 - B2_Mm1t SINE B2 -18 175 3 6 870 1951 271 107 46 chr13 37473159 37473605 -82810707 - Lx9 LINE L1 -474 7170 6738 6 870 1821 264 97 29 chr13 37473890 37474661 -82809651 - Lx9 LINE L1 -1660 5984 5177 6 870 264 141 138 23 chr13 37474660 37474747 -82809565 - Lx6 LINE L1 -1 7459 7363 7 870 450 53 0 0 chr13 37474765 37474822 -82809490 + (CCCCCT)n Simple_repeat Simple_repeat 6 62 0 7 870 278 333 86 24 chr13 37474848 37475103 -82809209 - RLTR15 LTR ERVK -17 342 72 7 870 1278 242 75 3 chr13 37475163 37475494 -82808818 - Lx7 LINE L1 -217 7479 7125 7 870 6365 210 88 21 chr13 37475492 37477350 -82806962 - Lx7 LINE L1 -677 7019 5028 7 870 1463 74 5 0 chr13 37477350 37477540 -82806772 - B2_Mm1a SINE B2 -1 192 2 7 870 6233 260 52 28 chr13 37477540 37477723 -82806589 - Lx7 LINE L1 -853 5027 4853 7 870 1708 26 0 0 chr13 37477723 37477916 -82806396 + B2_Mm1a SINE B2 1 193 0 7 870 6233 260 52 28 chr13 37477916 37479036 -82805276 - Lx7 LINE L1 -1028 4852 3700 7 870 317 223 33 8 chr13 37479585 37479683 -82804629 - L1M2 LINE L1 -484 5816 5723 7 870 456 19 0 0 chr13 37480072 37480125 -82804187 + (TG)n Simple_repeat Simple_repeat 1 53 0 7 870 237 65 0 0 chr13 37480127 37480158 -82804154 + (GA)n Simple_repeat Simple_repeat 2 32 0 7 870 653 249 51 28 chr13 37481293 37481471 -82802841 + Tigger1 DNA MER2_type 1 182 -2236 7 870 409 261 18 0 chr13 37481444 37481555 -82802757 + Tigger1 DNA MER2_type 2209 2321 -97 7 870 326 306 34 34 chr13 37481994 37482143 -82802169 + MER33 DNA MER1_type 5 153 -171 7 870 266 273 0 0 chr13 37482218 37482317 -82801995 - ID4 SINE ID -41 111 13 7 870 1670 171 45 6 chr13 37482540 37482852 -82801460 - ORR1A4 LTR MaLR -5 324 1 7 870 227 234 20 62 chr13 37483097 37483243 -82801069 + (TATAA)n Simple_repeat Simple_repeat 5 144 0 7 870 264 209 41 41 chr13 37483211 37483356 -82800956 + (TTATA)n Simple_repeat Simple_repeat 2 146 0 7 870 188 306 0 0 chr13 37483390 37483439 -82800873 + MER5B DNA MER1_type 69 117 -61 7 870 2758 24 0 29 chr13 37483870 37484212 -82800100 - L1Md_F2 LINE L1 0 6582 6251 7 870 600 333 136 34 chr13 37484280 37484693 -82799619 + MER21B LTR ERV1 351 805 -58 7 870 342 0 0 0 chr13 37486244 37486282 -82798030 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 7 870 817 272 9 5 chr13 37486286 37486500 -82797812 - ID_B1 SINE B4 -9 215 1 7 871 1770 153 18 79 chr13 37487924 37488310 -82796002 - ORR1B1 LTR MaLR 0 394 1 7 871 444 248 18 0 chr13 37488310 37488418 -82795894 - RMER15 LTR ERVL -72 503 394 7 871 205 231 0 0 chr13 37488438 37488477 -82795835 - MER5A DNA MER1_type -149 40 2 7 871 410 155 28 0 chr13 37488521 37488592 -82795720 + MIRc SINE MIR 82 154 -114 7 871 371 269 66 20 chr13 37490093 37490245 -82794067 + MER33 DNA MER1_type 154 312 -12 7 871 519 281 133 42 chr13 37490666 37491083 -82793229 - MLT1D LTR MaLR 0 505 6 7 871 180 0 0 0 chr13 37491116 37491136 -82793176 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 7 871 787 260 11 0 chr13 37491873 37491949 -82792363 + ID SINE ID 4 81 -143 7 871 366 264 0 68 chr13 37491949 37492067 -82792245 + PB1D10 SINE Alu 1 110 -7 7 871 459 125 0 0 chr13 37492091 37492163 -82792149 + (TC)n Simple_repeat Simple_repeat 2 73 0 7 871 2191 197 19 12 chr13 37492365 37492781 -82791531 + MTD LTR MaLR 1 419 0 7 871 278 208 104 78 chr13 37492818 37492933 -82791379 - MLT1A1 LTR MaLR -21 387 270 7 871 23 33 0 0 chr13 37492994 37493024 -82791288 + AT_rich Low_complexity Low_complexity 1 30 0 7 871 1041 97 0 7 chr13 37493024 37493169 -82791143 - B1_Mus1 SINE Alu -1 147 4 7 871 257 300 25 0 chr13 37493800 37493880 -82790432 + B3 SINE B2 131 212 -4 7 871 360 0 0 0 chr13 37494009 37494049 -82790263 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 871 540 200 29 6 chr13 37494059 37494230 -82790082 + GA-rich Low_complexity Low_complexity 1 175 0 7 871 1566 11 0 0 chr13 37494230 37494410 -82789902 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 7 871 286 132 114 29 chr13 37494738 37494808 -82789504 - L1P5 LINE L1 -569 5587 5512 7 871 419 247 68 101 chr13 37494878 37495126 -82789186 + L1MA7 LINE L1 5788 6027 -264 7 871 830 294 129 12 chr13 37495140 37495474 -82788838 - MTEa LTR MaLR -6 373 1 7 871 362 322 16 0 chr13 37495477 37495598 -82788714 + L1MA7 LINE L1 6026 6148 -164 7 871 24 0 0 0 chr13 37495893 37495917 -82788395 + AT_rich Low_complexity Low_complexity 1 24 0 7 871 26386 69 13 2 chr13 37495917 37500000 -82784312 - L1Md_F2 LINE L1 -1 6581 2449 7 871 9336 63 3 2 chr13 37500000 37500476 -82783836 - L1Md_F LINE L1 -3435 2448 1975 1 871 183 42 0 0 chr13 37500476 37500500 -82783812 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 871 9336 64 3 2 chr13 37500500 37501297 -82783015 - L1Md_F LINE L1 -3909 1974 1174 1 871 3084 113 5 0 chr13 37501292 37501725 -82782587 - L1Md_F LINE L1 -5702 914 480 1 871 1842 121 4 8 chr13 37501725 37501991 -82782321 - L1VL1 LINE L1 -6156 266 2 3 871 273 272 12 12 chr13 37502206 37502288 -82782024 + ID4 SINE ID 2 83 0 4 871 493 270 232 56 chr13 37502491 37502797 -82781515 - RLTR9A LTR ERVK -8 360 1 5 871 226 206 119 93 chr13 37503346 37503464 -82780848 + MER89 LTR ERV1 73 193 -366 6 871 2316 197 59 36 chr13 37504201 37504632 -82779680 + RLTR20C LTR ERVK 1 432 -102 7 871 618 26 0 0 chr13 37504632 37504708 -82779604 + (TG)n Simple_repeat Simple_repeat 2 77 0 8 871 2316 197 59 36 chr13 37504708 37504798 -82779514 + RLTR20C LTR ERVK 433 533 -1 7 871 487 291 79 54 chr13 37505103 37505303 -82779009 + B3A SINE B2 7 206 -10 9 871 666 109 0 0 chr13 37505531 37505650 -82778662 + (TTG)n Simple_repeat Simple_repeat 2 120 0 1 871 651 229 33 40 chr13 37505729 37505879 -82778433 + ID_B1 SINE B4 76 224 0 1 871 185 0 40 0 chr13 37505943 37505968 -82778344 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 871 597 233 85 8 chr13 37505973 37506103 -82778209 - B1_Mur4 SINE Alu -5 145 6 1 871 185 214 107 0 chr13 37506111 37506167 -82778145 - L2 LINE L2 -536 2883 2822 1 871 1187 81 0 0 chr13 37506193 37506341 -82777971 + B1_Mus1 SINE Alu 1 148 0 1 871 2195 93 9 67 chr13 37506358 37506703 -82777609 - ORR1A3 LTR MaLR 0 326 2 1 871 275 208 39 0 chr13 37507482 37507559 -82776753 + GA-rich Low_complexity Low_complexity 6 85 0 1 871 946 259 68 39 chr13 37507934 37508215 -82776097 + B4 SINE B4 2 290 -2 1 871 457 257 9 0 chr13 37509260 37509373 -82774939 - Tigger5 DNA MER2_type -1 2405 2292 1 871 403 332 133 0 chr13 37509373 37509584 -82774728 - Tigger5 DNA MER2_type -2164 242 4 1 871 21 36 0 0 chr13 37510127 37510155 -82774157 + AT_rich Low_complexity Low_complexity 1 28 0 2 871 272 341 104 15 chr13 37510199 37510333 -82773979 - MER2 DNA MER2_type -192 153 8 2 871 539 53 0 13 chr13 37510815 37510891 -82773421 + (TAAAA)n Simple_repeat Simple_repeat 2 76 0 2 871 1042 117 6 6 chr13 37511678 37511858 -82772454 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 871 696 196 3 17 chr13 37511881 37512243 -82772069 + (TG)n Simple_repeat Simple_repeat 1 356 0 2 871 347 137 14 0 chr13 37512269 37512342 -82771970 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 871 1290 286 98 34 chr13 37512766 37512858 -82771454 + Lx9 LINE L1 6989 7073 -571 2 871 1537 171 59 125 chr13 37512858 37513331 -82770981 + RMER10A LTR ERVL 1 442 0 2 871 1290 286 98 34 chr13 37513331 37513802 -82770510 + Lx9 LINE L1 7074 7588 -56 2 871 1443 83 0 10 chr13 37514187 37514382 -82769930 - B2_Mm2 SINE B2 -2 193 1 2 871 475 246 45 0 chr13 37514779 37514889 -82769423 - MTD LTR MaLR -3 416 302 2 871 867 209 111 35 chr13 37514913 37515111 -82769201 - MTD LTR MaLR -206 213 1 2 871 268 146 0 0 chr13 37515111 37515152 -82769160 - MTD-int LTR MaLR 0 1258 1218 2 871 373 321 133 14 chr13 37516179 37516392 -82767920 + ORR1E LTR MaLR 32 259 -111 2 871 208 216 0 0 chr13 37517283 37517320 -82766992 + polypurine Low_complexity Low_complexity 3 39 0 2 871 354 274 68 0 chr13 37517692 37517809 -82766503 + L1MB4 LINE L1 6045 6169 -11 3 871 2749 99 2 40 chr13 37517809 37518239 -82766073 - Lx2 LINE L1 -1 6996 6583 3 871 3336 48 8 0 chr13 37519207 37519604 -82764708 + MTB LTR MaLR 1 400 0 3 871 1240 95 20 45 chr13 37520009 37520207 -82764105 + B2_Mm2 SINE B2 1 193 -2 3 871 409 136 0 0 chr13 37520209 37520268 -82764044 + B2_Mm2 SINE B2 33 91 -104 3 871 281 184 0 0 chr13 37520367 37520416 -82763896 + RSINE1 SINE B4 4 52 -113 3 871 399 89 0 0 chr13 37520429 37520485 -82763827 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 871 441 0 0 0 chr13 37521060 37521109 -82763203 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 871 425 275 79 37 chr13 37521154 37521382 -82762930 - L1MD2 LINE L1 -5146 1401 1159 3 871 230 352 0 0 chr13 37521634 37521725 -82762587 - L1MD2 LINE L1 -5667 880 790 3 871 640 318 128 29 chr13 37521918 37522365 -82761947 - L1MD2 LINE L1 -5990 557 67 3 871 192 321 0 35 chr13 37522390 37522448 -82761864 + L2c LINE L2 2784 2839 -580 3 871 211 346 60 0 chr13 37522721 37522854 -82761458 + L2c LINE L2 3217 3357 -30 3 871 396 268 142 0 chr13 37523410 37523600 -82760712 + L1MA6 LINE L1 6080 6296 -4 4 871 292 321 19 91 chr13 37523623 37523751 -82760561 - MER33 DNA MER1_type -105 219 97 4 871 1000 228 24 5 chr13 37523751 37523958 -82760354 + B3 SINE B2 5 215 -1 4 871 292 321 19 91 chr13 37523958 37523983 -82760329 - MER33 DNA MER1_type -228 96 77 4 871 1331 58 40 6 chr13 37523990 37524163 -82760149 + B2_Mm2 SINE B2 2 180 -15 4 871 261 0 0 0 chr13 37524163 37524192 -82760120 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 871 276 149 0 0 chr13 37524222 37524269 -82760043 + (CATATA)n Simple_repeat Simple_repeat 6 52 0 4 871 564 65 0 0 chr13 37524269 37524346 -82759966 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 871 542 146 175 0 chr13 37524347 37524450 -82759862 - B1_Mur3 SINE Alu -8 141 21 4 871 236 290 39 70 chr13 37524460 37524616 -82759696 + YREP_Mm Unknown Unknown 151 301 -1511 4 871 580 267 7 7 chr13 37524486 37524633 -82759679 - ID_B1 SINE B4 0 224 78 4 871 333 326 0 31 chr13 37524626 37524724 -82759588 - MER33 DNA MER1_type -227 97 3 4 871 196 343 104 39 chr13 37524783 37524965 -82759347 - MIRb SINE MIR -11 257 64 5 871 203 146 0 24 chr13 37525297 37525339 -82758973 + CT-rich Low_complexity Low_complexity 3 43 0 5 871 394 143 24 0 chr13 37525367 37525378 -82758934 + polypyrimidine Low_complexity Low_complexity 77 87 0 5 871 1361 17 23 0 chr13 37525378 37525554 -82758758 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 871 394 143 24 0 chr13 37525554 37525626 -82758686 + CT-rich Low_complexity Low_complexity 3 76 0 5 871 970 298 142 20 chr13 37527067 37527747 -82756565 - L1MC4a LINE L1 -7 7875 7116 5 871 216 281 123 0 chr13 37527789 37527846 -82756466 - ID2 SINE ID -13 70 7 5 871 330 26 0 0 chr13 37528075 37528114 -82756198 + (GA)n Simple_repeat Simple_repeat 1 39 0 5 871 654 13 0 0 chr13 37529443 37529518 -82754794 + (TTC)n Simple_repeat Simple_repeat 3 77 0 5 871 234 0 0 0 chr13 37529554 37529580 -82754732 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 871 189 0 0 0 chr13 37530165 37530186 -82754126 + (CATA)n Simple_repeat Simple_repeat 4 24 0 6 871 339 266 26 34 chr13 37530335 37530452 -82753860 + PB1D10 SINE Alu 1 116 -1 6 871 1005 109 14 0 chr13 37530458 37530596 -82753716 + B1_Mur3 SINE Alu 10 149 0 6 871 299 362 27 47 chr13 37531085 37531233 -82753079 + RSINE1 SINE B4 7 151 -14 6 871 362 309 82 29 chr13 37531267 37531437 -82752875 - Kanga1 DNA Tc2 -172 1573 1395 6 871 197 302 77 77 chr13 37532040 37532144 -82752168 + MIRb SINE MIR 107 210 -58 6 871 767 168 0 32 chr13 37533888 37534073 -82750239 + CT-rich Low_complexity Low_complexity 1 179 0 6 871 318 239 49 74 chr13 37534232 37534354 -82749958 + ID_B1 SINE B4 106 224 0 6 871 537 242 16 24 chr13 37534888 37535011 -82749301 - B1F SINE Alu -12 137 16 6 871 370 267 133 46 chr13 37535160 37535333 -82748979 + MLT1B LTR MaLR 11 198 -192 6 871 974 282 156 6 chr13 37535421 37535760 -82748552 + Tigger6a DNA MER2_type 140 529 -554 7 871 599 268 141 5 chr13 37535787 37535971 -82748341 + Tigger6a DNA MER2_type 624 832 -251 7 871 286 276 40 0 chr13 37536520 37536596 -82747716 + PB1D10 SINE Alu 18 96 -21 7 871 365 355 0 8 chr13 37537029 37537151 -82747161 + Tigger6a DNA MER2_type 963 1083 0 7 871 2470 78 3 50 chr13 37537157 37537496 -82746816 - ORR1A2 LTR MaLR 0 327 5 7 871 308 258 32 21 chr13 37538177 37538272 -82746040 + GA-rich Low_complexity Low_complexity 3 98 0 7 871 320 321 80 6 chr13 37539250 37539413 -82744899 - MLT1C LTR MaLR -277 190 16 7 871 329 384 65 29 chr13 37539507 37539786 -82744526 + HERV16-int LTR ERVL 1973 2261 -2735 7 871 556 171 194 8 chr13 37540222 37540346 -82743966 + B1_Mur3 SINE Alu 3 149 0 7 871 519 234 0 68 chr13 37540495 37540628 -82743684 + FordPrefect DNA Tip100 1431 1554 -129 7 871 930 301 55 38 chr13 37540728 37541120 -82743192 + RMER15 LTR ERVL 70 561 -14 7 871 469 202 146 8 chr13 37542073 37542203 -82742109 + B1_Mur1 SINE Alu 1 148 -1 7 871 944 154 6 0 chr13 37542203 37542378 -82741934 + GA-rich Low_complexity Low_complexity 2 177 0 8 871 1106 195 37 101 chr13 37542395 37542781 -82741531 + RMER16 LTR ERVK 4 533 0 8 871 234 0 0 0 chr13 37543156 37543182 -82741130 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 8 871 212 59 0 29 chr13 37545666 37545701 -82738611 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 8 871 694 265 128 37 chr13 37545736 37546034 -82738278 - ORR1E LTR MaLR -2 357 33 8 871 916 318 136 32 chr13 37546083 37546554 -82737758 - MLT1F2 LTR MaLR -23 537 18 8 871 301 280 93 68 chr13 37546690 37546851 -82737461 + MER5B DNA MER1_type 7 171 -7 8 871 277 216 11 11 chr13 37546988 37547077 -82737235 + G-rich Low_complexity Low_complexity 5 93 0 8 871 1545 17 0 0 chr13 37547080 37547260 -82737052 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 8 871 328 283 33 0 chr13 37547409 37547501 -82736811 + B1F SINE Alu 13 107 -42 8 871 495 212 64 71 chr13 37547556 37547715 -82736597 + L1MC1 LINE L1 5882 6039 -145 9 871 194 105 26 0 chr13 37547736 37547774 -82736538 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 871 729 277 89 40 chr13 37547795 37548043 -82736269 - B4A SINE B4 -18 274 15 9 871 703 236 89 22 chr13 37548076 37548301 -82736011 + L1MC1 LINE L1 6094 6333 0 9 871 296 290 149 34 chr13 37548433 37548608 -82735704 - MIR3 SINE MIR -5 203 9 9 871 211 289 77 26 chr13 37548757 37548835 -82735477 + RSINE1 SINE B4 19 100 -65 9 871 226 263 66 0 chr13 37548960 37549036 -82735276 - ORR1A1-int LTR MaLR -1615 177 97 9 871 21 36 0 0 chr13 37549987 37550015 -82734297 + AT_rich Low_complexity Low_complexity 1 28 0 9 871 347 286 68 0 chr13 37550096 37550229 -82734083 + B1_Mur1 SINE Alu 2 143 -6 9 871 212 149 0 41 chr13 37550364 37550413 -82733899 + A-rich Low_complexity Low_complexity 5 51 0 9 871 498 75 0 0 chr13 37553121 37553188 -82731124 + (TTCC)n Simple_repeat Simple_repeat 3 69 0 9 871 259 317 125 29 chr13 37553405 37553509 -82730803 + PB1D10 SINE Alu 1 114 -3 1 871 235 167 0 23 chr13 37553600 37553643 -82730669 + RMER5 LTR ERV1 33 74 -460 1 871 924 225 17 0 chr13 37553647 37553825 -82730487 + B3 SINE B2 1 181 -35 1 871 312 317 48 41 chr13 37554675 37554873 -82729439 + ORR1E LTR MaLR 77 269 -101 1 871 706 302 96 19 chr13 37555008 37555152 -82729160 - L1MA5 LINE L1 -368 5932 5791 1 871 535 27 14 14 chr13 37555152 37555226 -82729086 + (TA)n Simple_repeat Simple_repeat 2 75 0 1 871 706 302 96 19 chr13 37555226 37555445 -82728867 - L1MA5 LINE L1 -510 5790 5542 1 871 183 348 104 26 chr13 37556446 37556561 -82727751 + L3 LINE CR1 3126 3249 -1240 1 871 23 0 0 0 chr13 37556891 37556914 -82727398 + AT_rich Low_complexity Low_complexity 1 23 0 1 871 344 309 94 14 chr13 37556955 37557093 -82727219 + MLT1A1 LTR MaLR 2 150 -258 1 871 198 0 0 0 chr13 37557195 37557217 -82727095 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 871 368 299 99 26 chr13 37557513 37557720 -82726592 - MER92C LTR ERV1 -173 381 115 1 871 485 273 233 22 chr13 37557720 37558042 -82726270 - MLT1B LTR MaLR 0 390 1 1 871 268 331 24 121 chr13 37558042 37558117 -82726195 - MER92C LTR ERV1 -421 133 62 1 871 708 123 81 8 chr13 37559545 37559668 -82724644 + RLTR11A2 LTR ERVK 312 443 -84 1 871 270 0 0 0 chr13 37560686 37560716 -82723596 + (A)n Simple_repeat Simple_repeat 1 30 0 1 871 306 0 0 0 chr13 37561279 37561313 -82722999 + (TC)n Simple_repeat Simple_repeat 1 34 0 1 871 441 54 0 0 chr13 37561313 37561368 -82722944 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 871 957 85 28 11 chr13 37561400 37561549 -82722763 + MTB_Mm LTR MaLR 170 407 0 1 871 273 75 0 0 chr13 37562991 37563031 -82721281 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 871 1136 79 0 0 chr13 37563031 37563170 -82721142 - B1_Mus1 SINE Alu -9 139 1 1 871 246 267 39 26 chr13 37563509 37563586 -82720726 - ORR1D2 LTR MaLR -13 357 280 1 871 486 0 0 0 chr13 37563713 37563767 -82720545 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 871 641 323 50 5 chr13 37564653 37564855 -82719457 - MER20 DNA MER1_type -4 215 5 1 871 345 285 93 96 chr13 37564866 37565157 -82719155 + MER33 DNA MER1_type 14 303 -21 1 871 1096 7 0 15 chr13 37565659 37565767 -82718545 + (TTC)n Simple_repeat Simple_repeat 2 107 0 1 871 1217 90 0 6 chr13 37565767 37565945 -82718367 + (TCC)n Simple_repeat Simple_repeat 2 178 0 1 871 1096 7 0 15 chr13 37565945 37565973 -82718339 + (TTC)n Simple_repeat Simple_repeat 1 28 0 1 871 330 281 168 37 chr13 37566085 37566192 -82718120 + B1F2 SINE Alu 1 121 -28 1 871 444 236 11 43 chr13 37566102 37566195 -82718117 + ID_B1 SINE B4 113 202 -22 1 871 1147 61 0 45 chr13 37566212 37566226 -82718086 - B1_Mus1 SINE Alu 0 148 140 1 871 225 0 0 0 chr13 37566226 37566251 -82718061 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 1 871 1147 61 0 45 chr13 37566251 37566390 -82717922 - B1_Mus1 SINE Alu -9 139 2 1 871 707 172 22 36 chr13 37566426 37566565 -82717747 + B1F2 SINE Alu 13 149 0 1 871 422 133 11 0 chr13 37566565 37566655 -82717657 + (GA)n Simple_repeat Simple_repeat 2 92 0 1 871 473 236 0 0 chr13 37566682 37566771 -82717541 + B1F SINE Alu 3 91 -58 1 871 345 75 0 0 chr13 37567042 37567095 -82717217 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 871 390 134 0 0 chr13 37567628 37567695 -82716617 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 871 26 0 0 0 chr13 37568498 37568524 -82715788 + AT_rich Low_complexity Low_complexity 1 26 0 1 871 215 283 0 0 chr13 37568779 37568825 -82715487 + ID4 SINE ID 27 72 -11 1 871 468 0 0 0 chr13 37568829 37568881 -82715431 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 871 252 0 0 0 chr13 37568881 37568908 -82715404 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 871 313 271 0 0 chr13 37569084 37569143 -82715169 + RSINE1 SINE B4 12 70 -95 1 871 368 229 94 51 chr13 37569157 37569295 -82715017 + L1MB3 LINE L1 5926 6069 -114 1 871 261 0 0 0 chr13 37569300 37569329 -82714983 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 1 871 180 294 97 56 chr13 37569442 37569514 -82714798 + L4 LINE RTE 333 407 -1622 1 871 524 301 55 12 chr13 37570839 37571004 -82713308 + B3A SINE B2 1 172 -26 1 871 26 30 0 0 chr13 37571052 37571085 -82713227 + AT_rich Low_complexity Low_complexity 1 33 0 1 871 243 325 11 11 chr13 37571096 37571183 -82713129 + BC1_Mm scRNA scRNA 3 89 -63 1 871 402 340 92 79 chr13 37571432 37571748 -82712564 - ORR1E LTR MaLR -5 354 35 1 871 852 117 73 0 chr13 37571796 37571933 -82712379 - B1_Mus1 SINE Alu 0 148 2 1 871 23 0 0 0 chr13 37572346 37572369 -82711943 + AT_rich Low_complexity Low_complexity 1 23 0 1 871 221 139 23 0 chr13 37572985 37573028 -82711284 + GA-rich Low_complexity Low_complexity 3 46 0 1 871 258 81 0 0 chr13 37573042 37573079 -82711233 + (GGA)n Simple_repeat Simple_repeat 3 39 0 1 871 540 193 0 118 chr13 37573134 37573269 -82711043 - PB1D9 SINE Alu 0 120 2 1 871 1116 53 0 0 chr13 37574307 37574459 -82709853 + (GA)n Simple_repeat Simple_repeat 2 153 0 1 871 699 12 0 0 chr13 37574779 37574859 -82709453 + (TC)n Simple_repeat Simple_repeat 1 80 0 1 871 1359 154 163 30 chr13 37575443 37575460 -82708852 - RMER17C LTR ERVK 0 410 387 1 871 198 0 0 0 chr13 37575460 37575482 -82708830 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1 871 1359 154 163 30 chr13 37575482 37575826 -82708486 - RMER17C LTR ERVK -24 386 1 1 871 2029 132 28 28 chr13 37575826 37576153 -82708159 - RMER17C-int LTR ERVK 0 3238 2912 1 871 294 136 0 0 chr13 37576178 37576222 -82708090 + RMER17C LTR ERVK 296 339 -71 1 871 465 19 0 0 chr13 37576228 37576282 -82708030 + (TC)n Simple_repeat Simple_repeat 2 55 0 1 871 1205 35 0 40 chr13 37576282 37576433 -82707879 - B1_Mus2 SINE Alu -2 145 1 1 871 1179 128 0 16 chr13 37577757 37577782 -82706530 - B2_Mm2 SINE B2 -14 181 159 1 871 216 86 0 0 chr13 37577782 37577817 -82706495 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 1 871 1179 128 0 16 chr13 37577817 37577974 -82706338 - B2_Mm2 SINE B2 -37 158 2 1 871 328 350 28 35 chr13 37578010 37578155 -82706157 + MIRb SINE MIR 110 253 -15 1 871 621 269 20 34 chr13 37578158 37578294 -82706018 + B4A SINE B4 90 223 -69 1 871 668 262 23 22 chr13 37578294 37578497 -82705815 + B3A SINE B2 3 185 -10 1 871 249 250 39 77 chr13 37578637 37578741 -82705571 + B4A SINE B4 193 292 0 1 871 300 299 69 38 chr13 37579297 37579457 -82704855 - L3 LINE CR1 -791 3698 3534 1 871 755 184 190 0 chr13 37579705 37579884 -82704428 + B3 SINE B2 4 216 0 1 871 205 120 80 0 chr13 37579889 37579939 -82704373 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 871 265 315 87 0 chr13 37580521 37580613 -82703699 + MLT1A LTR MaLR 74 173 -201 1 871 382 306 24 40 chr13 37580616 37580742 -82703570 + B1F SINE Alu 5 128 -21 1 871 409 326 18 9 chr13 37580742 37580759 -82703553 + ID_B1 SINE B4 86 242 -50 1 871 1220 72 0 0 chr13 37580849 37581002 -82703310 + B2_Mm2 SINE B2 1 153 -42 1 871 420 55 0 0 chr13 37581002 37581057 -82703255 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 1 871 552 262 25 57 chr13 37581354 37581512 -82702800 - MTD LTR MaLR -82 337 185 1 871 492 68 0 0 chr13 37581572 37581645 -82702667 + (TCTCTG)n Simple_repeat Simple_repeat 6 78 0 1 871 180 77 0 0 chr13 37581645 37581671 -82702641 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 871 21 0 0 0 chr13 37581709 37581730 -82702582 + AT_rich Low_complexity Low_complexity 1 21 0 1 871 425 305 104 111 chr13 37581795 37582083 -82702229 - B4A SINE B4 -4 288 3 1 871 406 316 26 45 chr13 37582163 37582319 -82701993 + MLT1L LTR MaLR 102 254 -356 1 871 298 289 44 0 chr13 37582391 37582481 -82701831 + B1_Mur4 SINE Alu 48 141 -9 1 871 423 0 0 0 chr13 37582817 37582864 -82701448 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 871 201 74 0 0 chr13 37583118 37583145 -82701167 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 871 477 0 0 0 chr13 37583175 37583228 -82701084 + (TAAA)n Simple_repeat Simple_repeat 3 55 0 1 871 260 321 66 51 chr13 37583672 37583869 -82700443 + L2 LINE L2 2629 2828 -591 1 871 202 351 69 52 chr13 37585442 37585616 -82698696 - MIRb SINE MIR -8 260 84 1 871 200 214 29 0 chr13 37585975 37586045 -82698267 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 1 871 457 158 46 12 chr13 37586056 37586229 -82698083 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 1 871 270 0 0 0 chr13 37586560 37586590 -82697722 + (TTAG)n Simple_repeat Simple_repeat 2 31 0 1 871 595 227 83 0 chr13 37586603 37586735 -82697577 - B1_Mur2 SINE Alu -5 144 2 1 871 677 233 0 8 chr13 37586944 37587078 -82697234 - B1_Mur1 SINE Alu -13 136 4 1 871 345 268 56 7 chr13 37587370 37587513 -82696799 + MLT1F1 LTR MaLR 339 488 -81 1 871 761 103 8 0 chr13 37587787 37587904 -82696408 + (TC)n Simple_repeat Simple_repeat 2 119 0 1 871 1212 39 42 0 chr13 37588341 37588756 -82695556 + (TCTA)n Simple_repeat Simple_repeat 1 432 0 1 871 261 297 76 13 chr13 37588784 37588941 -82695371 - L1MA5 LINE L1 0 6300 6134 1 871 333 304 45 0 chr13 37588973 37589085 -82695227 - B1F2 SINE Alu -32 117 1 1 871 324 120 0 0 chr13 37589256 37589306 -82695006 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 871 444 260 0 20 chr13 37589315 37589413 -82694899 - RSINE1 SINE B4 -37 128 33 1 871 652 232 24 16 chr13 37589541 37589668 -82694644 - B1F SINE Alu -3 146 19 1 871 278 264 21 103 chr13 37589585 37589682 -82694630 - MT2B LTR ERVL -344 257 169 1 871 236 167 0 77 chr13 37591169 37591221 -82693091 - MER63D DNA AcHobo -688 373 326 1 871 270 231 0 19 chr13 37591230 37591283 -82693029 + ID4 SINE ID 10 61 -22 2 871 1299 73 67 6 chr13 37591302 37591481 -82692831 + B2_Mm2 SINE B2 1 190 -5 2 871 758 182 0 6 chr13 37591506 37591666 -82692646 + GA-rich Low_complexity Low_complexity 1 159 0 2 871 241 139 0 0 chr13 37591666 37591702 -82692610 + (GGGA)n Simple_repeat Simple_repeat 3 38 0 2 871 962 151 0 16 chr13 37591703 37591885 -82692427 + GA-rich Low_complexity Low_complexity 1 179 0 2 871 1236 51 0 0 chr13 37591917 37592073 -82692239 + (GAAA)n Simple_repeat Simple_repeat 3 158 0 2 871 180 0 0 0 chr13 37592195 37592215 -82692097 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 2 871 213 39 0 0 chr13 37592523 37592549 -82691763 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 2 871 268 143 0 0 chr13 37594700 37594742 -82689570 - RSINE1 SINE B4 -64 101 60 2 871 441 0 0 0 chr13 37594931 37594980 -82689332 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 871 770 298 112 13 chr13 37594980 37595293 -82689019 + MER2 DNA MER2_type 2 345 0 2 871 723 281 158 37 chr13 37595739 37596061 -82688251 - Lx8 LINE L1 0 7473 7113 2 871 372 133 0 0 chr13 37596626 37596686 -82687626 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 871 681 251 137 16 chr13 37596769 37596838 -82687474 + B4A SINE B4 1 213 -79 2 871 218 290 48 109 chr13 37596838 37596959 -82687353 + B1_Mm SINE Alu 7 120 -27 2 871 261 0 0 0 chr13 37596959 37596988 -82687324 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 2 871 887 102 55 0 chr13 37596988 37597116 -82687196 - B1_Mus1 SINE Alu -12 136 2 2 871 218 290 48 109 chr13 37597116 37597140 -82687172 + B1_Mm SINE Alu 121 143 -4 2 871 186 208 0 0 chr13 37597167 37597220 -82687092 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 871 226 321 62 0 chr13 37597225 37597306 -82687006 - B4 SINE B4 -205 87 2 2 871 188 111 0 27 chr13 37597428 37597465 -82686847 + (TA)n Simple_repeat Simple_repeat 1 36 0 2 871 387 0 0 0 chr13 37597913 37597956 -82686356 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 871 552 147 25 84 chr13 37598399 37598421 -82685891 - B1F SINE Alu -37 112 94 2 871 231 36 0 0 chr13 37598421 37598449 -82685863 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 2 871 576 156 0 0 chr13 37598449 37598545 -82685767 - PB1D10 SINE Alu -21 96 1 2 871 216 0 0 0 chr13 37599595 37599619 -82684693 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 871 42 0 0 0 chr13 37599807 37599849 -82684463 + AT_rich Low_complexity Low_complexity 1 42 0 2 871 1085 223 19 5 chr13 37599850 37600062 -82684250 - B3 SINE B2 -1 215 1 2 871 215 103 26 0 chr13 37602092 37602131 -82682181 + (GGAA)n Simple_repeat Simple_repeat 4 43 0 2 871 253 284 40 0 chr13 37602628 37602702 -82681610 + MER21B LTR ERV1 28 104 -759 2 871 289 20 120 0 chr13 37602716 37602766 -82681546 + (TTTTG)n Simple_repeat Simple_repeat 3 58 0 2 871 472 343 146 42 chr13 37602863 37603219 -82681093 + MER21B LTR ERV1 270 662 -201 2 871 315 0 0 0 chr13 37603234 37603269 -82681043 + (TTTTA)n Simple_repeat Simple_repeat 2 36 0 2 871 451 324 20 66 chr13 37603275 37603427 -82680885 - B1F SINE Alu -3 146 2 2 871 466 172 46 0 chr13 37603442 37603529 -82680783 + MER21B LTR ERV1 664 754 -109 2 871 420 256 164 30 chr13 37603715 37603916 -82680396 + MER33 DNA MER1_type 8 235 -89 2 871 716 228 44 57 chr13 37603946 37604158 -82680154 - B3A SINE B2 -7 188 1 2 871 231 36 0 0 chr13 37604283 37604311 -82680001 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 2 871 213 94 0 0 chr13 37604340 37604372 -82679940 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 871 606 232 144 11 chr13 37604398 37604585 -82679727 - ID_B1 SINE B4 -11 213 2 2 871 342 278 28 0 chr13 37604587 37604695 -82679617 - L1MB3 LINE L1 -178 6005 5895 2 871 262 88 0 0 chr13 37605147 37605181 -82679131 + (GGGGA)n Simple_repeat Simple_repeat 3 36 0 2 871 649 94 50 45 chr13 37605181 37605360 -82678952 + GA-rich Low_complexity Low_complexity 1 180 0 2 871 969 85 5 49 chr13 37605378 37605563 -82678749 + (GGGGA)n Simple_repeat Simple_repeat 4 180 0 2 871 333 0 0 0 chr13 37605650 37605687 -82678625 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 871 465 275 73 81 chr13 37606851 37607238 -82677074 - MER57C2 LTR ERV1 0 434 1 2 871 312 329 100 0 chr13 37607868 37608008 -82676304 - HAL1-3A_ME LINE L1 -420 2438 2285 2 871 700 219 15 63 chr13 37608049 37608254 -82676058 - B3A SINE B2 0 198 4 2 871 547 160 9 65 chr13 37608292 37608399 -82675913 - B1F SINE Alu -1 148 48 2 871 248 0 0 30 chr13 37608664 37608697 -82675615 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 871 213 39 0 0 chr13 37608767 37608793 -82675519 + (CCCCCA)n Simple_repeat Simple_repeat 1 26 0 2 871 234 248 90 18 chr13 37609697 37609808 -82674504 + L1M5 LINE L1 5786 5904 -220 2 871 696 293 101 43 chr13 37610004 37610261 -82674051 + B4A SINE B4 8 279 -13 2 871 45 19 0 0 chr13 37610299 37610351 -82673961 + AT_rich Low_complexity Low_complexity 1 52 0 2 871 210 71 0 0 chr13 37610804 37610832 -82673480 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 871 448 290 236 25 chr13 37611051 37611327 -82672985 - MLT1A1 LTR MaLR 0 408 75 2 871 349 203 0 0 chr13 37611356 37611415 -82672897 + RSINE1 SINE B4 72 130 -35 2 871 324 64 0 0 chr13 37611475 37611522 -82672790 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 2 871 1334 44 0 0 chr13 37611522 37611681 -82672631 - B2_Mm1t SINE B2 -33 160 2 2 871 843 10 0 0 chr13 37612493 37612589 -82671723 + (TTC)n Simple_repeat Simple_repeat 1 96 0 2 871 7991 54 4 7 chr13 37612590 37614031 -82670281 - L1Md_F2 LINE L1 -19 6563 5129 2 871 5185 53 0 6 chr13 37614032 37614673 -82669639 + L1Md_F2 LINE L1 4482 5118 -765 2 871 507 73 0 0 chr13 37614748 37614816 -82669496 + (TA)n Simple_repeat Simple_repeat 1 68 0 2 871 252 0 0 0 chr13 37614816 37614843 -82669469 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 871 701 208 10 52 chr13 37614843 37614996 -82669316 - B2_Mm2 SINE B2 -57 159 2 2 871 198 341 142 26 chr13 37615082 37615272 -82669040 - L2 LINE L2 -1733 1686 1475 2 871 489 342 43 5 chr13 37615313 37615501 -82668811 - MER58B DNA MER1_type -144 197 3 2 871 1124 127 17 6 chr13 37615943 37616117 -82668195 - B2_Mm2 SINE B2 -18 177 2 2 871 279 54 0 0 chr13 37616223 37616260 -82668052 + (TAA)n Simple_repeat Simple_repeat 3 39 0 2 871 207 167 0 0 chr13 37617158 37617194 -82667118 + MIRb SINE MIR 217 252 -16 2 108 296 336 0 33 chr13 37617613 37617733 -82666579 + PB1D10 SINE Alu 1 116 -1 2 872 448 315 59 88 chr13 37618677 37619165 -82665147 + L1MB3 LINE L1 5703 6176 -4 2 872 267 224 0 0 chr13 37620156 37620232 -82664080 + C-rich Low_complexity Low_complexity 1 76 0 2 872 2125 171 57 8 chr13 37620332 37620733 -82663579 + MTC LTR MaLR 1 421 0 2 872 400 267 31 114 chr13 37621273 37621501 -82662811 + L2a LINE L2 3218 3426 0 2 872 363 154 0 0 chr13 37621550 37621615 -82662697 + GA-rich Low_complexity Low_complexity 3 67 0 2 872 228 287 101 34 chr13 37622094 37622213 -82662099 - L1MC4a LINE L1 -540 7342 7216 2 872 873 276 5 9 chr13 37623011 37623227 -82661085 - B3 SINE B2 0 216 2 2 872 297 0 0 0 chr13 37623465 37623498 -82660814 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 872 27 0 0 0 chr13 37623879 37623906 -82660406 + AT_rich Low_complexity Low_complexity 1 27 0 2 872 26 0 0 0 chr13 37624761 37624787 -82659525 + AT_rich Low_complexity Low_complexity 1 26 0 2 872 2019 140 21 54 chr13 37624834 37625257 -82659055 + RMER17C LTR ERVK 2 410 0 2 872 218 301 36 0 chr13 37626143 37626226 -82658086 + (CTATT)n Simple_repeat Simple_repeat 4 89 0 2 872 382 289 42 42 chr13 37626574 37626693 -82657619 + RSINE1 SINE B4 3 121 -44 2 872 423 0 0 0 chr13 37626693 37626740 -82657572 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 872 384 22 0 0 chr13 37626740 37626784 -82657528 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 872 284 311 0 7 chr13 37626843 37626940 -82657372 + ID4_ SINE ID 8 101 -51 2 872 1289 116 6 0 chr13 37627135 37627316 -82656996 - ORR1B2 LTR MaLR 0 367 186 2 872 489 110 0 0 chr13 37627849 37627922 -82656390 + (TTGG)n Simple_repeat Simple_repeat 2 74 0 2 872 323 316 0 20 chr13 37627922 37627933 -82656379 - PB1D10 SINE Alu -19 98 5 2 872 350 294 0 0 chr13 37627933 37628018 -82656294 - ID_B1 SINE B4 -54 170 86 2 872 1365 84 20 20 chr13 37628807 37629002 -82655310 + B2_Mm2 SINE B2 1 195 0 2 872 382 250 11 21 chr13 37629160 37629254 -82655058 - MTEb LTR MaLR -7 372 280 2 872 458 321 96 5 chr13 37629474 37629671 -82654641 - MER31B LTR ERV1 -9 457 243 2 872 645 69 0 0 chr13 37631227 37631314 -82652998 + (CA)n Simple_repeat Simple_repeat 1 87 0 2 872 1181 195 0 36 chr13 37631538 37631761 -82652551 + B3 SINE B2 2 216 0 2 872 236 318 45 0 chr13 37631798 37631864 -82652448 + ID4_ SINE ID 7 75 -8 2 872 183 42 0 0 chr13 37631864 37631888 -82652424 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2 872 799 216 7 7 chr13 37631913 37632062 -82652250 + B1_Mur1 SINE Alu 1 149 0 2 872 645 233 156 15 chr13 37632338 37632543 -82651769 + B4A SINE B4 1 234 -58 2 872 992 214 10 19 chr13 37632531 37632736 -82651576 + B3 SINE B2 7 209 -7 2 872 357 24 0 0 chr13 37632736 37632778 -82651534 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 872 528 16 0 0 chr13 37633318 37633379 -82650933 + (GGA)n Simple_repeat Simple_repeat 2 62 0 2 872 456 143 0 0 chr13 37633474 37633572 -82650740 + (GA)n Simple_repeat Simple_repeat 1 98 0 2 872 276 295 0 0 chr13 37634646 37634707 -82649605 + MLT1J LTR MaLR 250 310 -202 3 872 999 260 84 139 chr13 37636062 37636572 -82647740 + MER44B DNA MER2_type 4 485 -65 3 872 1029 279 66 54 chr13 37636575 37636909 -82647403 - ORR1E LTR MaLR -4 355 18 3 872 273 294 29 0 chr13 37636921 37636989 -82647323 + MER44B DNA MER2_type 480 549 -1 3 872 482 0 0 17 chr13 37637669 37637728 -82646584 + (TTTC)n Simple_repeat Simple_repeat 2 59 0 3 872 385 58 0 0 chr13 37637730 37637782 -82646530 - B2_Mm1a SINE B2 -15 178 127 3 872 637 83 17 6 chr13 37637798 37637893 -82646419 - B2_Mm2 SINE B2 -49 167 66 3 872 432 233 11 0 chr13 37637900 37637990 -82646322 - MTD LTR MaLR -328 91 1 3 872 277 259 58 23 chr13 37638007 37638094 -82646218 - MTEb LTR MaLR -2 377 288 3 872 216 0 0 0 chr13 37638640 37638664 -82645648 + (A)n Simple_repeat Simple_repeat 1 24 0 3 872 321 329 7 42 chr13 37639052 37639195 -82645117 + G-rich Low_complexity Low_complexity 2 139 0 3 872 229 267 22 0 chr13 37639796 37639886 -82644426 + (TCCTG)n Simple_repeat Simple_repeat 5 96 0 3 872 2241 150 34 27 chr13 37639925 37640363 -82643949 + RMER10A LTR ERVL 1 441 -1 3 872 183 156 0 0 chr13 37640363 37640395 -82643917 + T-rich Low_complexity Low_complexity 1 32 0 3 872 180 222 0 0 chr13 37640878 37640914 -82643398 - MIRc SINE MIR -222 46 11 3 872 843 222 73 41 chr13 37641152 37641353 -82642959 + B3A SINE B2 8 196 -2 3 872 278 287 14 50 chr13 37641638 37641784 -82642528 - ORR1E LTR MaLR -238 136 1 3 872 610 317 102 3 chr13 37641873 37642186 -82642126 - MER2 DNA MER2_type -1 344 1 3 872 208 211 0 0 chr13 37642265 37642303 -82642009 + CT-rich Low_complexity Low_complexity 1 38 0 3 872 438 20 0 0 chr13 37642436 37642487 -82641825 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 872 210 254 104 0 chr13 37643958 37644025 -82640287 - B1F1 SINE Alu -33 116 43 3 872 242 183 161 58 chr13 37644203 37644290 -82640022 - MER46C DNA MER2_type 0 338 243 3 872 310 261 86 11 chr13 37644328 37644421 -82639891 - MER46C DNA MER2_type -151 187 88 3 872 330 170 0 0 chr13 37645926 37646020 -82638292 + (TATATG)n Simple_repeat Simple_repeat 5 98 0 3 872 234 232 67 57 chr13 37646243 37646348 -82637964 + RMER12 LTR ERVK 17 122 -1200 3 872 263 209 76 65 chr13 37646638 37646730 -82637582 + L1MD1 LINE L1 5915 6007 -235 3 872 233 189 0 36 chr13 37646902 37646957 -82637355 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 3 872 360 0 0 0 chr13 37646965 37647005 -82637307 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 872 342 314 73 14 chr13 37647013 37647184 -82637128 + ORR1E LTR MaLR 14 202 -163 3 872 305 307 66 0 chr13 37647532 37647669 -82636643 + L1MD2 LINE L1 6204 6349 -10 3 872 296 308 111 0 chr13 37648208 37648325 -82635987 + B1F SINE Alu 20 149 0 3 872 577 358 56 30 chr13 37648377 37648402 -82635910 - MER2 DNA MER2_type 0 345 323 3 872 1324 140 18 22 chr13 37648402 37648629 -82635683 + URR1A DNA MER1_type 1 226 0 3 872 577 358 56 30 chr13 37648629 37648905 -82635407 - MER2 DNA MER2_type -23 322 36 3 872 277 237 34 34 chr13 37649463 37649581 -82634731 + (CA)n Simple_repeat Simple_repeat 2 119 0 3 872 336 64 0 0 chr13 37649616 37649663 -82634649 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 872 258 306 103 15 chr13 37649837 37649973 -82634339 + MIRm SINE MIR 37 184 -92 3 872 382 269 50 116 chr13 37650241 37650439 -82633873 + ORR1E LTR MaLR 7 191 -168 3 872 235 167 0 69 chr13 37652591 37652649 -82631663 + C-rich Low_complexity Low_complexity 3 56 0 3 872 381 22 0 0 chr13 37654875 37654921 -82629391 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 872 891 131 0 0 chr13 37655423 37655583 -82628729 + (TCTA)n Simple_repeat Simple_repeat 4 163 0 3 872 476 235 10 0 chr13 37655802 37655904 -82628408 + PB1D10 SINE Alu 5 107 -10 3 872 878 221 80 20 chr13 37656257 37656456 -82627856 + B3 SINE B2 1 211 -5 3 872 371 253 0 0 chr13 37656548 37656631 -82627681 + ID4_ SINE ID 1 83 0 3 872 288 337 75 10 chr13 37656738 37656939 -82627373 + MIR SINE MIR 46 259 -3 3 872 215 371 9 0 chr13 37656987 37657092 -82627220 - L2 LINE L2 -664 2755 2650 3 872 537 276 159 0 chr13 37657241 37657411 -82626901 - MIR SINE MIR 0 262 66 3 872 278 341 22 15 chr13 37657442 37657579 -82626733 - B1F SINE Alu -11 138 1 3 872 180 0 0 0 chr13 37657730 37657750 -82626562 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 872 1598 219 83 11 chr13 37658207 37658589 -82625723 - MTD LTR MaLR -12 407 10 3 872 279 286 0 14 chr13 37659000 37659071 -82625241 - MER2 DNA MER2_type -80 265 196 3 872 715 326 74 47 chr13 37659217 37659516 -82624796 - MER2 DNA MER2_type -28 317 11 3 872 1352 210 42 11 chr13 37659516 37659800 -82624512 + RMER10A LTR ERVL 1 293 -149 3 872 774 154 59 0 chr13 37660148 37660284 -82624028 + RMER10A LTR ERVL 298 441 -1 3 872 533 233 44 43 chr13 37661355 37661507 -82622805 - B1F SINE Alu 0 149 1 3 872 494 303 6 6 chr13 37661795 37661971 -82622341 + L1MA6 LINE L1 6102 6277 -23 3 872 1014 167 46 100 chr13 37662451 37662690 -82621622 - URR1A DNA MER1_type 0 226 1 3 872 626 0 14 0 chr13 37663002 37663076 -82621236 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 872 438 121 37 3 chr13 37664225 37664302 -82620010 + MTD LTR MaLR 336 421 0 3 872 458 231 14 12 chr13 37664312 37664427 -82619885 - ORR1E LTR MaLR -240 119 3 3 872 189 221 205 13 chr13 37665735 37665813 -82618499 - L4 LINE RTE -686 1343 1251 3 872 608 274 102 19 chr13 37666185 37666449 -82617863 - RMER15 LTR ERVL -16 559 274 3 872 3095 65 20 22 chr13 37666991 37667399 -82616913 - MTB_Mm LTR MaLR 0 407 1 3 872 5867 118 65 86 chr13 37667400 37668520 -82615792 - MTB_Mm-int LTR MaLR -1 1097 1 3 872 3048 66 0 75 chr13 37668520 37668578 -82615734 - MTB_Mm LTR MaLR 0 407 361 3 872 1226 61 0 0 chr13 37668578 37668725 -82615587 + B1_Mus2 SINE Alu 1 147 0 3 872 975 99 0 0 chr13 37668733 37668874 -82615438 + (GAA)n Simple_repeat Simple_repeat 2 142 0 3 872 3048 66 0 75 chr13 37668874 37669246 -82615066 - MTB_Mm LTR MaLR -47 360 1 3 872 363 60 0 0 chr13 37669372 37669422 -82614890 + (TCTCTG)n Simple_repeat Simple_repeat 3 52 0 3 872 234 136 0 0 chr13 37669422 37669466 -82614846 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 872 401 147 14 42 chr13 37669837 37669908 -82614404 - URR1B DNA MER1_type 0 225 157 3 872 249 210 145 24 chr13 37670251 37670334 -82613978 + MER5A DNA MER1_type 36 128 -61 3 872 307 273 13 0 chr13 37670836 37670913 -82613399 + B4A SINE B4 1 78 -214 3 872 284 178 0 0 chr13 37670912 37670957 -82613355 + B4A SINE B4 186 230 -62 3 872 576 240 20 33 chr13 37670957 37671108 -82613204 + B1_Mur2 SINE Alu 1 149 0 3 872 550 262 147 42 chr13 37671119 37671378 -82612934 + B4A SINE B4 4 289 -3 3 872 396 0 0 0 chr13 37672261 37672305 -82612007 + (TTA)n Simple_repeat Simple_repeat 2 45 0 3 872 1250 41 0 0 chr13 37672305 37672451 -82611861 - B1_Mm SINE Alu -1 146 1 3 872 263 228 0 32 chr13 37672472 37672567 -82611745 + T-rich Low_complexity Low_complexity 2 93 0 3 872 236 194 56 0 chr13 37673203 37673275 -82611037 + (GGATG)n Simple_repeat Simple_repeat 3 78 0 3 872 378 266 90 18 chr13 37673678 37673789 -82610523 + PB1D10 SINE Alu 2 120 0 3 872 333 292 78 26 chr13 37674036 37674152 -82610160 + ORR1C2 LTR MaLR 189 310 -74 3 872 427 295 146 83 chr13 37675152 37675681 -82608631 - L1MC3 LINE L1 -97 7688 7127 3 872 362 57 19 0 chr13 37675692 37675745 -82608567 + (TATG)n Simple_repeat Simple_repeat 2 55 0 3 872 279 261 158 32 chr13 37675745 37675840 -82608472 - PB1D10 SINE Alu -10 107 1 3 872 406 339 17 6 chr13 37675888 37676063 -82608249 - L1MC1 LINE L1 -52 6281 6105 3 872 215 138 35 0 chr13 37676650 37676708 -82607604 + (CAGA)n Simple_repeat Simple_repeat 2 61 0 3 872 396 371 78 13 chr13 37677016 37677169 -82607143 + MER115 DNA Tip100 111 273 -420 3 872 1501 108 9 13 chr13 37677202 37677428 -82606884 + URR1B DNA MER1_type 1 225 0 3 872 698 229 6 0 chr13 37678688 37678867 -82605445 + GA-rich Low_complexity Low_complexity 1 180 0 3 872 490 226 11 22 chr13 37678884 37679065 -82605247 + GA-rich Low_complexity Low_complexity 2 180 0 3 872 546 185 4 36 chr13 37680091 37680342 -82603970 + CT-rich Low_complexity Low_complexity 1 242 0 3 872 323 276 46 52 chr13 37680445 37680598 -82603714 + MLT1K LTR MaLR 438 589 -6 3 872 627 289 47 16 chr13 37681117 37681310 -82603002 + MER58A DNA MER1_type 14 212 -12 3 872 248 350 30 10 chr13 37681528 37681629 -82602683 - L2a LINE L2 -18 3408 3306 3 872 1228 21 0 14 chr13 37682009 37682152 -82602160 - B1_Mus2 SINE Alu -2 145 5 3 872 282 29 0 0 chr13 37682252 37682287 -82602025 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 872 307 216 203 0 chr13 37682510 37682584 -82601728 + PB1D10 SINE Alu 19 107 -10 3 872 35 71 0 0 chr13 37683213 37683283 -82601029 + AT_rich Low_complexity Low_complexity 1 70 0 3 872 242 347 118 0 chr13 37684365 37684509 -82599803 - MER5A DNA MER1_type -22 167 7 3 872 306 309 96 0 chr13 37685109 37685203 -82599109 + PB1D10 SINE Alu 6 108 -9 3 872 216 0 0 0 chr13 37685211 37685235 -82599077 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 872 545 312 8 0 chr13 37685236 37685364 -82598948 + ID_B1 SINE B4 83 211 -13 3 872 295 314 136 13 chr13 37685412 37685567 -82598745 + MLT1A0 LTR MaLR 145 318 -47 3 872 297 209 0 0 chr13 37685784 37685851 -82598461 + CT-rich Low_complexity Low_complexity 1 67 0 3 872 902 347 61 0 chr13 37686106 37686469 -82597843 + Lx8 LINE L1 6562 6946 -527 3 872 372 43 0 0 chr13 37686473 37686519 -82597793 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 872 569 365 19 22 chr13 37686526 37686795 -82597517 + Lx8 LINE L1 7050 7317 -156 3 872 21 0 0 0 chr13 37686916 37686937 -82597375 + AT_rich Low_complexity Low_complexity 1 21 0 3 872 323 277 44 63 chr13 37687897 37687999 -82596313 + B1F SINE Alu 1 107 -42 3 872 342 0 0 0 chr13 37687999 37688037 -82596275 + (TAAAA)n Simple_repeat Simple_repeat 5 42 0 3 872 323 270 50 83 chr13 37688037 37688083 -82596229 + B1F SINE Alu 108 147 -2 3 872 727 276 103 12 chr13 37688351 37688593 -82595719 - MER2 DNA MER2_type -81 264 1 3 872 765 175 26 57 chr13 37688593 37688773 -82595539 - MER33 DNA MER1_type -27 297 124 4 872 261 0 0 0 chr13 37688794 37688823 -82595489 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 872 225 94 0 0 chr13 37688823 37688855 -82595457 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 872 687 256 11 28 chr13 37688873 37689054 -82595258 - B3A SINE B2 -16 182 5 4 872 790 59 52 23 chr13 37690659 37690833 -82593479 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 872 631 72 77 6 chr13 37690856 37691024 -82593288 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 872 760 133 17 31 chr13 37691043 37691338 -82592974 + (CA)n Simple_repeat Simple_repeat 1 290 0 4 872 767 230 90 5 chr13 37691382 37691570 -82592742 + B3 SINE B2 4 207 -9 4 872 315 366 92 12 chr13 37691762 37691925 -82592387 - LTR16B2 LTR ERVL -277 185 10 4 872 232 320 132 8 chr13 37691976 37692105 -82592207 - MLT1B LTR MaLR -35 355 211 4 872 1433 190 155 43 chr13 37692159 37692467 -82591845 + MTD LTR MaLR 1 351 -68 4 872 235 0 0 54 chr13 37692467 37692504 -82591808 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 872 1433 190 155 43 chr13 37692504 37692569 -82591743 + MTD LTR MaLR 352 416 -3 4 872 525 194 103 1 chr13 37692623 37692736 -82591576 + B3 SINE B2 2 117 -78 4 872 472 231 66 41 chr13 37692944 37693066 -82591246 + RMER20B LTR ERVK 1 125 -502 4 872 189 0 0 0 chr13 37693418 37693439 -82590873 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 4 872 244 380 62 25 chr13 37694057 37694219 -82590093 - MLT1A1 LTR MaLR -1 511 344 4 872 305 262 0 24 chr13 37694267 37694349 -82589963 - MLT1A1 LTR MaLR -38 370 291 4 872 1006 220 24 14 chr13 37694578 37694790 -82589522 + B3 SINE B2 3 216 0 4 872 268 305 36 51 chr13 37694851 37694989 -82589323 + B3 SINE B2 81 216 0 4 872 271 279 106 82 chr13 37695865 37695963 -82588349 - ID4 SINE ID -51 101 2 4 872 998 220 142 51 chr13 37696734 37697220 -82587092 + MT2A LTR ERVL 3 522 -11 4 872 447 68 0 0 chr13 37697571 37697630 -82586682 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 872 1066 299 50 44 chr13 37697731 37698070 -82586242 + MTE2a LTR MaLR 39 379 0 4 872 522 343 12 45 chr13 37698178 37698422 -82585890 - MLT1J LTR MaLR -4 508 273 4 872 774 86 0 0 chr13 37698447 37698563 -82585749 + (TC)n Simple_repeat Simple_repeat 1 116 0 4 872 952 283 14 9 chr13 37698622 37698843 -82585469 + ID_B1 SINE B4 3 224 0 4 872 1196 96 6 0 chr13 37698869 37699046 -82585266 + (GGAGA)n Simple_repeat Simple_repeat 3 180 0 4 872 230 318 30 0 chr13 37699051 37699117 -82585195 + MLT1H1 LTR MaLR 24 91 -464 4 872 321 203 43 0 chr13 37699316 37699385 -82584927 - PB1D9 SINE Alu -7 113 42 4 872 358 310 38 15 chr13 37700108 37700239 -82584073 - Lx6 LINE L1 -50 7410 7277 4 872 302 240 233 92 chr13 37700244 37700261 -82584051 + ID_B1 SINE B4 78 151 -141 4 872 608 126 197 25 chr13 37700261 37700383 -82583929 + B1_Mus1 SINE Alu 6 148 0 4 872 302 240 233 92 chr13 37700383 37700402 -82583910 + ID_B1 SINE B4 152 248 -44 4 872 861 256 70 33 chr13 37700413 37700684 -82583628 - Lx6 LINE L1 -192 7268 6988 4 872 697 330 74 18 chr13 37700724 37701116 -82583196 + Charlie2b DNA MER1_type 2369 2782 0 4 872 833 203 16 169 chr13 37701470 37701725 -82582587 - B3 SINE B2 0 216 1 4 872 348 240 155 10 chr13 37702035 37702132 -82582180 + PB1D10 SINE Alu 1 111 -6 4 872 898 223 122 31 chr13 37702141 37702396 -82581916 + B4A SINE B4 2 279 -13 4 872 552 309 94 97 chr13 37702396 37702726 -82581586 - ORR1E LTR MaLR -21 338 10 4 872 833 265 77 55 chr13 37702889 37703216 -82581096 + ORR1E LTR MaLR 22 355 -4 4 872 396 0 0 0 chr13 37703263 37703307 -82581005 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 872 248 343 49 49 chr13 37703314 37703498 -82580814 - L1MC LINE L1 -2002 5880 5697 4 872 289 336 54 8 chr13 37704555 37704684 -82579628 + ORR1E LTR MaLR 1 135 -224 4 872 368 230 69 0 chr13 37704745 37704816 -82579496 - PB1D10 SINE Alu 0 117 41 4 872 1115 266 28 96 chr13 37704816 37705248 -82579064 + MTE2a LTR MaLR 3 405 -14 4 872 248 255 0 0 chr13 37705264 37705311 -82579001 - B1F1 SINE Alu -100 49 3 4 872 215 260 39 0 chr13 37705450 37705527 -82578785 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 872 1470 163 118 176 chr13 37705900 37706067 -82578245 + MTC LTR MaLR 12 117 -304 4 872 1186 111 72 0 chr13 37706067 37706248 -82578064 - B2_Mm2 SINE B2 0 195 2 4 872 1470 163 118 176 chr13 37706248 37706512 -82577800 + MTC LTR MaLR 118 418 -3 4 872 390 291 60 0 chr13 37706590 37706707 -82577605 - MIR SINE MIR -136 126 3 4 872 597 250 75 59 chr13 37706731 37706918 -82577394 - B3A SINE B2 -4 194 5 4 872 342 0 0 0 chr13 37707045 37707083 -82577229 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 872 2046 156 87 11 chr13 37707236 37707427 -82576885 - ORR1C2 LTR MaLR 0 384 186 4 872 357 43 0 0 chr13 37707427 37707474 -82576838 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 872 2046 156 87 11 chr13 37707474 37707639 -82576673 - ORR1C2 LTR MaLR -199 185 1 4 872 697 306 93 11 chr13 37707644 37707912 -82576400 - MLT1J LTR MaLR -186 326 37 4 872 252 0 0 0 chr13 37708783 37708811 -82575501 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 872 453 291 50 19 chr13 37709142 37709303 -82575009 + Ricksha_c DNA MuDR 550 715 -1333 4 872 21 0 0 0 chr13 37710059 37710080 -82574232 + AT_rich Low_complexity Low_complexity 1 21 0 4 872 567 269 13 52 chr13 37710201 37710354 -82573958 + RSINE1 SINE B4 11 157 -8 4 872 398 260 10 30 chr13 37710415 37710513 -82573799 + B4 SINE B4 1 96 -196 4 872 745 223 19 8 chr13 37710513 37710725 -82573587 + B3A SINE B2 1 216 0 4 872 663 233 20 0 chr13 37710872 37711018 -82573294 + B1_Mur1 SINE Alu 1 149 0 4 872 189 94 0 0 chr13 37711030 37711062 -82573250 + (CAAAAA)n Simple_repeat Simple_repeat 5 36 0 4 872 584 162 27 0 chr13 37711222 37711370 -82572942 + (CA)n Simple_repeat Simple_repeat 1 152 0 4 872 228 186 70 0 chr13 37711379 37711422 -82572890 - PB1D7 SINE Alu -5 115 70 4 872 918 109 0 0 chr13 37711424 37711561 -82572751 + (TCC)n Simple_repeat Simple_repeat 1 137 0 4 872 495 0 0 0 chr13 37711619 37711674 -82572638 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 4 872 261 180 0 0 chr13 37712404 37712454 -82571858 + CT-rich Low_complexity Low_complexity 1 50 0 4 872 1277 27 0 0 chr13 37712976 37713123 -82571189 + B1_Mm SINE Alu 1 147 0 4 872 310 231 14 0 chr13 37713941 37714084 -82570228 + (CA)n Simple_repeat Simple_repeat 2 146 0 4 872 180 233 0 0 chr13 37714169 37714242 -82570070 + (CA)n Simple_repeat Simple_repeat 1 73 0 4 872 192 40 0 0 chr13 37714242 37714267 -82570045 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 872 730 283 5 20 chr13 37714739 37714934 -82569378 + B3A SINE B2 3 194 -4 4 872 333 0 0 0 chr13 37715022 37715059 -82569253 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 872 21 0 0 0 chr13 37715112 37715133 -82569179 + AT_rich Low_complexity Low_complexity 1 21 0 4 872 581 170 130 0 chr13 37715171 37715271 -82569041 - B3 SINE B2 -103 113 1 4 872 264 269 138 9 chr13 37715419 37715535 -82568777 - MTEa LTR MaLR 0 379 249 4 872 587 252 55 14 chr13 37715831 37715976 -82568336 + ID_B1 SINE B4 59 209 -15 4 872 188 213 0 16 chr13 37716003 37716065 -82568247 + GA-rich Low_complexity Low_complexity 1 61 0 4 872 306 259 35 0 chr13 37716128 37716213 -82568099 + L1M3 LINE L1 5516 5603 -565 4 872 863 265 24 14 chr13 37716217 37716424 -82567888 + B3 SINE B2 8 216 0 4 872 299 231 8 76 chr13 37716426 37716484 -82567828 + L1M3 LINE L1 5596 5655 -516 4 872 1448 145 155 61 chr13 37716484 37716859 -82567453 - RMER17C LTR ERVK 0 410 1 4 872 299 224 0 82 chr13 37716859 37716893 -82567419 + L1M3 LINE L1 5655 5684 -496 4 872 2421 198 40 88 chr13 37718679 37719283 -82565029 - RMER15 LTR ERVL 0 575 1 4 872 188 229 142 71 chr13 37721223 37721336 -82562976 + MIR3 SINE MIR 14 134 -74 4 872 196 284 91 39 chr13 37721604 37721681 -82562631 + MER5A DNA MER1_type 9 89 -100 4 872 329 328 68 34 chr13 37721756 37721933 -82562379 - MER5A DNA MER1_type -4 185 3 4 872 398 209 171 26 chr13 37722344 37722496 -82561816 + RMER20B LTR ERVK 132 305 -322 4 872 495 48 0 0 chr13 37722568 37722630 -82561682 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 872 388 224 18 112 chr13 37722743 37722859 -82561453 - PB1 SINE Alu -37 112 8 4 872 433 277 200 19 chr13 37723195 37723291 -82561021 + LTR40a LTR ERVL 5 128 -391 4 872 1315 148 9 30 chr13 37723291 37723521 -82560791 + URR1A DNA MER1_type 1 225 -1 4 872 433 305 113 88 chr13 37723521 37723858 -82560454 + LTR40a LTR ERVL 129 457 -5 4 872 4078 130 59 32 chr13 37723973 37724702 -82559610 + RMER6A LTR ERVK 2 750 -6 4 872 218 262 217 54 chr13 37724781 37724910 -82559402 + L3 LINE CR1 4168 4317 -172 4 872 1326 62 83 17 chr13 37725500 37725681 -82558631 - B2_Mm2 SINE B2 -2 193 1 4 872 327 289 149 31 chr13 37725751 37725912 -82558400 - MLT1A1 LTR MaLR -4 404 225 4 872 307 295 73 128 chr13 37725891 37725944 -82558368 - MTEb LTR MaLR -7 372 324 4 872 2463 113 0 0 chr13 37725944 37726271 -82558041 + ORR1A2 LTR MaLR 1 327 0 4 872 307 301 71 122 chr13 37726271 37726419 -82557893 - MTEb LTR MaLR -56 323 158 4 872 181 355 16 103 chr13 37726468 37726653 -82557659 + MIR3 SINE MIR 2 170 -38 4 872 216 0 0 0 chr13 37726665 37726689 -82557623 + (A)n Simple_repeat Simple_repeat 1 24 0 4 872 807 158 29 0 chr13 37726690 37726829 -82557483 + B1F2 SINE Alu 2 144 -5 4 872 675 143 5 15 chr13 37726870 37727077 -82557235 + (CA)n Simple_repeat Simple_repeat 1 204 0 4 872 306 115 0 55 chr13 37727081 37727136 -82557176 + HAL1-3A_ME LINE L1 1977 2028 -830 4 872 1065 96 0 0 chr13 37727136 37727314 -82556998 + (CA)n Simple_repeat Simple_repeat 2 179 0 4 872 1068 96 0 0 chr13 37727338 37727515 -82556797 + (CA)n Simple_repeat Simple_repeat 2 178 0 4 872 781 193 7 0 chr13 37727676 37727816 -82556496 - B1_Mur4 SINE Alu -9 141 1 4 872 1017 213 5 10 chr13 37727957 37728156 -82556156 - B3 SINE B2 0 216 19 4 872 1041 231 117 15 chr13 37728226 37728551 -82555761 - Lx8 LINE L1 -140 7333 6976 5 872 459 35 0 0 chr13 37728594 37728651 -82555661 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 872 294 291 120 86 chr13 37728679 37728946 -82555366 - B4 SINE B4 -16 276 1 5 872 360 280 0 0 chr13 37729545 37729556 -82554756 + ID_B1 SINE B4 80 172 -52 5 872 392 219 0 0 chr13 37729556 37729638 -82554674 + PB1D10 SINE Alu 10 91 -26 5 872 1067 89 0 18 chr13 37730428 37730647 -82553665 + (TG)n Simple_repeat Simple_repeat 1 214 0 5 872 902 236 61 15 chr13 37731125 37731323 -82552989 - B3 SINE B2 -5 211 5 5 872 215 319 0 53 chr13 37731391 37731467 -82552845 - MIRm SINE MIR 0 276 205 5 872 615 273 14 114 chr13 37731629 37731840 -82552472 + B3A SINE B2 6 195 0 5 872 272 264 83 0 chr13 37732387 37732459 -82551853 + L2c LINE L2 3273 3350 -37 5 872 1106 117 0 6 chr13 37732765 37732945 -82551367 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 5 872 658 217 7 35 chr13 37732945 37733088 -82551224 - B1_Mur3 SINE Alu -8 141 3 5 872 2375 154 60 5 chr13 37733132 37733529 -82550783 - MTC LTR MaLR 0 421 3 5 872 942 78 78 0 chr13 37733539 37733667 -82550645 + B1_Mus1 SINE Alu 3 140 -8 5 872 204 67 0 0 chr13 37733667 37733697 -82550615 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 5 872 362 304 17 0 chr13 37733725 37733840 -82550472 - MER45B DNA Tip100 -215 825 709 5 872 630 253 106 58 chr13 37733928 37733944 -82550368 - B3 SINE B2 0 216 204 5 872 348 127 0 0 chr13 37733944 37733999 -82550313 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 872 662 250 58 18 chr13 37733999 37734171 -82550141 - B3A SINE B2 -13 203 19 5 872 474 268 112 19 chr13 37734211 37734371 -82549941 - MER45B DNA Tip100 -469 571 397 5 872 402 305 66 33 chr13 37734371 37734607 -82549705 - MTE2b LTR MaLR 0 379 141 5 872 322 306 42 48 chr13 37734596 37734785 -82549527 - LTR16E2 LTR ERVL -286 282 95 5 872 191 319 42 0 chr13 37734887 37734959 -82549353 - MER5A DNA MER1_type -65 124 50 5 872 329 374 37 47 chr13 37734991 37735182 -82549130 + ORR1E LTR MaLR 3 191 -168 5 872 433 70 0 53 chr13 37735182 37735258 -82549054 + (TC)n Simple_repeat Simple_repeat 1 72 0 5 872 259 270 19 20 chr13 37735402 37735504 -82548808 + ORR1E LTR MaLR 278 378 -1 5 872 1055 127 62 34 chr13 37735570 37735749 -82548563 + B2_Mm2 SINE B2 2 185 -10 5 872 24 77 0 0 chr13 37735775 37735827 -82548485 + AT_rich Low_complexity Low_complexity 1 52 0 5 872 228 67 0 0 chr13 37736349 37736379 -82547933 + (A)n Simple_repeat Simple_repeat 1 30 0 5 872 194 0 0 37 chr13 37737104 37737131 -82547181 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 5 872 263 294 36 121 chr13 37737548 37737714 -82546598 - ORR1E LTR MaLR -12 358 207 5 872 573 9 18 62 chr13 37737829 37737942 -82546370 + (TCTCC)n Simple_repeat Simple_repeat 1 108 0 5 872 583 194 87 24 chr13 37738012 37738139 -82546173 + B1_Mur4 SINE Alu 13 147 -3 5 872 1040 278 16 8 chr13 37738153 37738396 -82545916 - ORR1E LTR MaLR -105 254 10 5 872 586 233 152 11 chr13 37738397 37738575 -82545737 - MTE-int LTR MaLR -50 1530 1328 5 872 193 254 31 31 chr13 37738693 37738758 -82545554 - MIRc SINE MIR -119 149 85 5 872 1572 255 35 49 chr13 37738782 37739107 -82545205 - MTD LTR MaLR 0 419 100 5 872 1418 157 107 149 chr13 37739107 37739489 -82544823 - ORR1B2 LTR MaLR 0 367 2 5 872 1572 255 35 49 chr13 37739489 37739588 -82544724 - MTD LTR MaLR -320 99 3 5 872 408 40 0 0 chr13 37739711 37739761 -82544551 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 872 538 291 134 50 chr13 37740249 37740592 -82543720 - MLT1A LTR MaLR -2 372 1 5 872 284 248 171 62 chr13 37741863 37742009 -82542303 + Tigger7 DNA MER2_type 2326 2487 -4 5 872 835 230 20 51 chr13 37742275 37742472 -82541840 - B3 SINE B2 -25 191 1 5 872 353 259 68 8 chr13 37742583 37742700 -82541612 - ORR1E LTR MaLR -212 147 24 5 872 432 0 0 0 chr13 37743332 37743380 -82540932 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 872 823 272 15 5 chr13 37744002 37744205 -82540107 - B3 SINE B2 -10 206 2 5 872 787 269 123 19 chr13 37744402 37744671 -82539641 + MLT1A0 LTR MaLR 12 308 -57 5 872 518 228 0 0 chr13 37744695 37744796 -82539516 + RSINE1 SINE B4 9 109 -56 5 872 333 0 0 0 chr13 37744810 37744847 -82539465 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 872 459 0 0 0 chr13 37744847 37744897 -82539415 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 872 348 140 65 30 chr13 37745532 37745701 -82538611 + (CAGAGA)n Simple_repeat Simple_repeat 3 177 0 5 872 543 246 0 0 chr13 37745703 37745841 -82538471 + GA-rich Low_complexity Low_complexity 2 139 0 5 872 881 193 0 7 chr13 37746812 37746958 -82537354 + B1_Mur1 SINE Alu 4 148 -1 5 872 298 214 0 22 chr13 37746979 37747070 -82537242 + GA-rich Low_complexity Low_complexity 1 89 0 5 872 1284 89 0 0 chr13 37747070 37747250 -82537062 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 872 618 268 49 14 chr13 37747550 37747694 -82536618 - B1_Mur2 SINE Alu 0 149 1 5 872 1037 58 0 61 chr13 37747719 37747867 -82536445 - B1_Mm SINE Alu -8 139 1 5 872 1170 170 44 0 chr13 37748089 37748295 -82536017 + B3 SINE B2 1 215 -1 5 873 806 303 10 0 chr13 37748816 37749024 -82535288 - MER58B DNA MER1_type -69 272 63 5 873 981 112 23 6 chr13 37749550 37749721 -82534591 + (TTTC)n Simple_repeat Simple_repeat 3 176 0 5 873 570 222 0 0 chr13 37750144 37750424 -82533888 + (TG)n Simple_repeat Simple_repeat 1 280 0 5 873 882 127 14 36 chr13 37751563 37751702 -82532610 + B1_Mur4 SINE Alu 2 137 -13 5 873 189 0 0 0 chr13 37751707 37751728 -82532584 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 873 1117 98 0 8 chr13 37751731 37751972 -82532340 + (GGA)n Simple_repeat Simple_repeat 1 238 0 5 873 198 91 0 0 chr13 37752987 37753020 -82531292 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 873 512 270 71 57 chr13 37753240 37753523 -82530789 + B4A SINE B4 3 289 -3 5 873 951 309 64 16 chr13 37753857 37754232 -82530080 + Lx8 LINE L1 6939 7331 -142 5 873 357 249 147 106 chr13 37754288 37754486 -82529826 + B4 SINE B4 18 223 -69 5 873 537 225 26 43 chr13 37754371 37754487 -82529825 + B1_Mur4 SINE Alu 36 149 -1 5 873 410 331 6 25 chr13 37754495 37754653 -82529659 + B4A SINE B4 126 280 -12 5 873 203 294 11 23 chr13 37754655 37754742 -82529570 + (CATA)n Simple_repeat Simple_repeat 3 88 0 5 873 204 111 0 0 chr13 37755248 37755284 -82529028 + (TGAG)n Simple_repeat Simple_repeat 2 37 0 5 873 356 273 91 0 chr13 37755285 37755384 -82528928 - PB1D10 SINE Alu -9 108 1 5 873 289 77 12 60 chr13 37755409 37755492 -82528820 + (TTTTG)n Simple_repeat Simple_repeat 1 79 0 5 873 1219 48 7 0 chr13 37755492 37755639 -82528673 - B1_Mus1 SINE Alu 0 148 1 5 873 534 16 0 0 chr13 37755998 37756061 -82528251 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 873 215 174 43 0 chr13 37756072 37756118 -82528194 + (ATTG)n Simple_repeat Simple_repeat 3 50 0 5 873 1177 159 187 20 chr13 37756120 37756371 -82527941 + MTD LTR MaLR 119 411 -8 5 873 188 34 0 33 chr13 37756558 37756588 -82527724 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 873 201 293 0 0 chr13 37756815 37756873 -82527439 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 873 560 244 0 40 chr13 37757769 37757893 -82526419 + RSINE1 SINE B4 4 122 -43 5 873 342 0 0 0 chr13 37757916 37757954 -82526358 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 873 201 256 38 13 chr13 37759087 37759142 -82525170 + CT-rich Low_complexity Low_complexity 30 86 0 5 873 965 116 17 6 chr13 37759142 37759316 -82524996 + (TCTCC)n Simple_repeat Simple_repeat 1 176 0 5 873 201 256 38 13 chr13 37759316 37759339 -82524973 + polypyrimidine Low_complexity Low_complexity 6 29 0 5 873 23 0 0 0 chr13 37759642 37759665 -82524647 + AT_rich Low_complexity Low_complexity 1 23 0 5 873 311 274 35 70 chr13 37759665 37759779 -82524533 - L1MA6 LINE L1 0 6300 6191 5 873 306 240 208 0 chr13 37759848 37759973 -82524339 - L1MA6 LINE L1 -128 6172 6022 5 873 752 176 40 40 chr13 37760066 37760214 -82524098 - B1_Mur1 SINE Alu 0 149 2 5 873 338 217 407 14 chr13 37760318 37760458 -82523854 - Lx8 LINE L1 -115 7358 7164 5 873 516 316 6 37 chr13 37760459 37760623 -82523689 - B3A SINE B2 -38 160 2 5 873 238 341 67 44 chr13 37760662 37760797 -82523515 - MLT1A0 LTR MaLR -227 138 1 5 873 289 258 92 10 chr13 37761322 37761420 -82522892 - ORR1E LTR MaLR -253 106 1 5 873 822 239 32 60 chr13 37761848 37762066 -82522246 + B3A SINE B2 5 216 0 5 873 243 305 165 57 chr13 37762432 37762644 -82521668 - MLT1I LTR MaLR -8 403 169 5 873 346 286 10 10 chr13 37762734 37762833 -82521479 + ID_B1 SINE B4 126 224 0 5 873 233 237 36 95 chr13 37762834 37762858 -82521454 + B4 SINE B4 1 19 -273 5 873 892 187 433 4 chr13 37762858 37762999 -82521313 + ORR1C2 LTR MaLR 1 170 -214 5 873 520 65 21 21 chr13 37762999 37763093 -82521219 + (TCTCTG)n Simple_repeat Simple_repeat 4 97 0 5 873 892 187 433 4 chr13 37763093 37763219 -82521093 + ORR1C2 LTR MaLR 171 383 -1 5 873 336 285 52 72 chr13 37763219 37763363 -82520949 + RSINE1 SINE B4 20 165 0 5 873 307 209 30 60 chr13 37763373 37763541 -82520771 + (TATAA)n Simple_repeat Simple_repeat 2 164 0 5 873 46 92 0 0 chr13 37763548 37763678 -82520634 + AT_rich Low_complexity Low_complexity 1 130 0 5 873 379 325 81 23 chr13 37763694 37763867 -82520445 - HAL1-2a_MD LINE L1 -507 2517 2335 5 873 607 218 37 8 chr13 37764175 37764309 -82520003 + ID_B1 SINE B4 84 221 -3 5 873 1747 201 52 37 chr13 37764433 37764811 -82519501 - MTD LTR MaLR -6 413 21 5 873 189 0 0 0 chr13 37764811 37764832 -82519480 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 5 873 1747 201 52 37 chr13 37764832 37764860 -82519452 - MTD LTR MaLR -399 20 1 5 873 335 312 64 45 chr13 37764986 37765251 -82519061 + Lx8 LINE L1 7095 7364 -109 5 873 770 113 0 8 chr13 37765605 37765730 -82518582 + (TG)n Simple_repeat Simple_repeat 2 125 0 6 873 1164 57 0 0 chr13 37765827 37765968 -82518344 + B1_Mus2 SINE Alu 2 142 -5 6 873 393 22 0 0 chr13 37765969 37766015 -82518297 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 6 873 243 0 0 0 chr13 37766982 37767009 -82517303 + (CCCTG)n Simple_repeat Simple_repeat 3 29 0 6 873 465 19 0 0 chr13 37767626 37767680 -82516632 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 873 858 301 53 44 chr13 37767854 37768195 -82516117 + MER2 DNA MER2_type 1 344 -1 6 873 353 342 22 27 chr13 37769657 37769827 -82514485 - MIRb SINE MIR -66 202 26 6 873 240 341 0 68 chr13 37771009 37771141 -82513171 - MER2 DNA MER2_type -1 344 222 6 873 257 214 178 14 chr13 37771418 37771521 -82512791 - MIR SINE MIR -22 246 118 6 873 260 326 70 58 chr13 37771608 37771764 -82512548 - MER5B DNA MER1_type -9 169 12 6 873 664 236 52 41 chr13 37772463 37772635 -82511677 + ID_B1 SINE B4 37 210 -14 6 873 205 190 0 23 chr13 37772635 37772678 -82511634 + GA-rich Low_complexity Low_complexity 4 45 0 6 873 210 57 0 79 chr13 37773398 37773436 -82510876 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 873 414 241 91 41 chr13 37773535 37773656 -82510656 + B1_Mur1 SINE Alu 23 149 0 6 873 356 105 39 13 chr13 37773702 37773779 -82510533 + CT-rich Low_complexity Low_complexity 4 82 0 6 873 351 0 0 0 chr13 37773779 37773818 -82510494 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 873 1216 62 0 0 chr13 37774007 37774153 -82510159 - B1_Mus2 SINE Alu -1 146 1 6 873 384 138 0 60 chr13 37774391 37774491 -82509821 + GA-rich Low_complexity Low_complexity 5 98 0 6 873 842 227 0 7 chr13 37774803 37774958 -82509354 + B3 SINE B2 25 178 -38 6 873 1912 171 249 59 chr13 37775465 37775921 -82508391 + MT2B LTR ERVL 1 558 -43 6 873 360 64 0 0 chr13 37775921 37775968 -82508344 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 873 1912 171 249 59 chr13 37775968 37776016 -82508296 + MT2B LTR ERVL 559 601 0 6 873 357 312 0 20 chr13 37776061 37776159 -82508153 - PB1D10 SINE Alu -21 96 1 6 873 252 412 10 0 chr13 37776443 37776545 -82507767 + LTR33 LTR ERVL 73 175 -340 6 873 22 35 0 0 chr13 37777334 37777363 -82506949 + AT_rich Low_complexity Low_complexity 1 29 0 6 873 400 296 0 0 chr13 37777717 37777798 -82506514 + PB1 SINE Alu 45 125 -2 6 873 220 238 48 223 chr13 37778351 37778454 -82505858 + ID_B1 SINE B4 78 162 -62 6 873 243 252 270 0 chr13 37778372 37778483 -82505829 + B1F SINE Alu 9 149 0 6 873 336 236 32 145 chr13 37778522 37778562 -82505750 + MT2B LTR ERVL 131 156 -445 6 873 537 239 8 3 chr13 37778562 37778682 -82505630 + B1_Mur2 SINE Alu 2 124 -25 6 873 549 259 21 35 chr13 37778861 37779005 -82505307 + RSINE1 SINE B4 24 165 0 6 873 201 244 0 0 chr13 37779006 37779051 -82505261 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 873 311 372 89 24 chr13 37779067 37779235 -82505077 + L1M5 LINE L1 4299 4477 -1669 6 873 1463 63 0 25 chr13 37779235 37779431 -82504881 + B2_Mm2 SINE B2 2 192 -3 6 873 218 214 0 0 chr13 37779767 37779809 -82504503 + ID4_ SINE ID 41 82 -1 6 873 192 77 0 0 chr13 37779984 37780010 -82504302 + (A)n Simple_repeat Simple_repeat 1 26 0 6 873 393 256 0 0 chr13 37780295 37780373 -82503939 + ID4_ SINE ID 5 82 -1 6 873 1350 64 47 0 chr13 37780520 37780691 -82503621 + B2_Mm2 SINE B2 2 180 -15 6 873 222 37 0 0 chr13 37780691 37780718 -82503594 + (GAAA)n Simple_repeat Simple_repeat 4 30 0 6 873 654 259 48 13 chr13 37780762 37780957 -82503355 - B3A SINE B2 -12 204 1 6 873 324 0 0 0 chr13 37781069 37781105 -82503207 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 873 369 250 29 39 chr13 37781143 37781247 -82503065 - Tigger7 DNA MER2_type -315 2176 2074 6 873 403 240 115 0 chr13 37781400 37781496 -82502816 - B4A SINE B4 -4 288 182 6 873 246 95 0 0 chr13 37781637 37781679 -82502633 + (A)n Simple_repeat Simple_repeat 1 42 0 6 873 522 0 0 0 chr13 37781847 37781905 -82502407 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 873 385 180 200 11 chr13 37781905 37781989 -82502323 - B1_Mur2 SINE Alu -7 142 42 6 873 468 251 0 2 chr13 37781993 37782559 -82501753 + CT-rich Low_complexity Low_complexity 1 564 0 6 873 626 170 0 0 chr13 37782764 37782864 -82501448 - B3 SINE B2 -110 106 7 6 873 1041 273 119 25 chr13 37784474 37784921 -82499391 + L1MB3 LINE L1 5661 6149 -34 6 873 234 0 0 0 chr13 37784934 37784960 -82499352 + (A)n Simple_repeat Simple_repeat 1 26 0 6 873 390 129 0 0 chr13 37784997 37785059 -82499253 + (CGTG)n Simple_repeat Simple_repeat 1 62 0 6 873 411 325 8 8 chr13 37785065 37785186 -82499126 - B3 SINE B2 -48 168 48 6 873 207 0 0 0 chr13 37785603 37785626 -82498686 + (A)n Simple_repeat Simple_repeat 1 23 0 6 873 752 297 93 47 chr13 37785878 37786199 -82498113 - MER2 DNA MER2_type -3 342 7 6 873 1197 54 7 0 chr13 37786205 37786352 -82497960 + B1_Mus1 SINE Alu 1 148 0 6 873 382 295 0 0 chr13 37786740 37786835 -82497477 - PB1D10 SINE Alu -5 112 18 6 873 281 309 25 0 chr13 37787037 37787118 -82497194 - ID4_ SINE ID 0 83 1 6 873 2619 133 34 29 chr13 37787353 37787770 -82496542 + MTC LTR MaLR 1 419 -2 6 873 1200 56 0 0 chr13 37788534 37788678 -82495634 + B1_Mm SINE Alu 2 145 -2 6 873 282 56 0 0 chr13 37788679 37788715 -82495597 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 873 313 107 375 19 chr13 37788803 37788907 -82495405 - B2_Mm2 SINE B2 -7 188 48 6 873 1264 92 17 0 chr13 37788967 37789140 -82495172 - B2_Mm1t SINE B2 -14 179 4 6 873 252 0 0 0 chr13 37789607 37789635 -82494677 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 873 204 97 0 0 chr13 37789829 37789860 -82494452 + (T)n Simple_repeat Simple_repeat 1 31 0 6 873 784 270 70 12 chr13 37790313 37790557 -82493755 + MER2 DNA MER2_type 4 261 -84 6 873 402 205 108 0 chr13 37790567 37790650 -82493662 - B1_Mur3 SINE Alu -2 147 56 6 873 543 240 0 0 chr13 37790643 37790739 -82493573 + PB1D7 SINE Alu 19 114 -6 6 873 257 305 7 132 chr13 37790739 37790791 -82493521 + B4A SINE B4 104 232 -60 6 873 3321 45 8 0 chr13 37792223 37792620 -82491692 + MTB LTR MaLR 1 400 0 6 873 563 309 18 24 chr13 37793440 37793609 -82490703 + MER5A DNA MER1_type 22 189 0 6 873 768 149 21 6 chr13 37795171 37795502 -82488810 + (CA)n Simple_repeat Simple_repeat 1 336 0 6 873 185 65 0 31 chr13 37795527 37795559 -82488753 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 873 378 143 0 0 chr13 37795700 37795763 -82488549 + (GGGAA)n Simple_repeat Simple_repeat 4 66 0 6 873 318 340 75 71 chr13 37796824 37797106 -82487206 + ORR1E LTR MaLR 77 359 0 6 873 333 336 122 86 chr13 37797975 37798466 -82485846 + L1MC5 LINE L1 7307 7815 -146 6 873 526 250 0 0 chr13 37798470 37798578 -82485734 + ID_B1 SINE B4 117 224 0 6 873 738 224 68 37 chr13 37798643 37798833 -82485479 + B3 SINE B2 5 200 -16 6 873 270 0 0 0 chr13 37799066 37799096 -82485216 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 873 271 232 36 12 chr13 37799200 37799283 -82485029 + GA-rich Low_complexity Low_complexity 4 88 0 6 873 330 67 0 0 chr13 37799301 37799346 -82484966 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 873 286 188 0 0 chr13 37801089 37801137 -82483175 + L1M LINE L1 5355 5402 -2480 6 873 289 220 61 71 chr13 37801139 37801237 -82483075 + MT2B LTR ERVL 168 264 -337 6 873 462 141 89 56 chr13 37801171 37801261 -82483051 + B1_Mur2 SINE Alu 45 137 -12 6 873 257 0 30 0 chr13 37802717 37802750 -82481562 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 873 710 113 0 0 chr13 37802753 37802850 -82481462 - B1_Mm SINE Alu -7 140 44 6 873 265 195 73 61 chr13 37802789 37802871 -82481441 - RLTR25B LTR ERVK -519 509 427 6 873 249 57 0 0 chr13 37803346 37803381 -82480931 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 6 873 630 151 185 0 chr13 37803392 37803414 -82480898 - B1_Mur1 SINE Alu 0 149 128 6 873 216 0 0 0 chr13 37803414 37803438 -82480874 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 873 679 134 12 0 chr13 37803438 37803536 -82480776 - B1_Mus1 SINE Alu -22 127 8 6 873 220 357 59 25 chr13 37803605 37803723 -82480589 + L2b LINE L2 3240 3361 -14 6 873 267 31 0 0 chr13 37804206 37804238 -82480074 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 873 292 234 21 59 chr13 37804290 37804476 -82479836 + (CCA)n Simple_repeat Simple_repeat 2 180 0 6 873 312 27 0 0 chr13 37804488 37804525 -82479787 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 873 570 238 16 0 chr13 37804562 37804688 -82479624 + MER5A DNA MER1_type 54 181 -8 6 873 23 33 0 0 chr13 37805561 37805591 -82478721 + AT_rich Low_complexity Low_complexity 1 30 0 6 873 490 159 91 0 chr13 37805602 37805690 -82478622 - B1_Mur1 SINE Alu -33 116 21 6 873 226 225 0 0 chr13 37805697 37805737 -82478575 + B3A SINE B2 2 41 -157 6 873 1221 72 48 6 chr13 37805737 37805905 -82478407 + B2_Mm2 SINE B2 2 176 -19 6 873 181 104 0 77 chr13 37809166 37809218 -82475094 + C-rich Low_complexity Low_complexity 2 49 0 6 873 575 328 19 29 chr13 37809255 37809465 -82474847 + MER20 DNA MER1_type 4 211 -8 6 873 1272 276 62 11 chr13 37809775 37810131 -82474181 + MTD LTR MaLR 32 405 -14 6 873 2499 262 124 114 chr13 37810159 37810285 -82474027 + MTD-int LTR MaLR 1 126 -1132 6 873 1947 144 116 6 chr13 37810285 37810613 -82473699 + ORR1B2 LTR MaLR 3 366 -1 6 873 2499 262 124 114 chr13 37810613 37811727 -82472585 + MTD-int LTR MaLR 127 1254 -4 6 873 810 134 0 8 chr13 37811781 37811901 -82472411 + B1_Mur4 SINE Alu 31 149 -1 7 873 740 263 164 12 chr13 37811922 37812172 -82472140 + MTD LTR MaLR 37 324 -95 7 873 267 31 0 0 chr13 37812251 37812283 -82472029 + (CAA)n Simple_repeat Simple_repeat 2 33 0 7 873 700 195 102 0 chr13 37812284 37812412 -82471900 + B1_Mur2 SINE Alu 1 141 -8 7 873 271 321 43 68 chr13 37812439 37812556 -82471756 + PB1D10 SINE Alu 2 115 -2 7 873 974 130 14 0 chr13 37812625 37812771 -82471541 + B1_Mus1 SINE Alu 1 148 0 7 873 1098 216 255 58 chr13 37812793 37813244 -82471068 + RMER4B LTR ERVK 35 574 -11 7 873 186 71 0 0 chr13 37813245 37813273 -82471039 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 7 873 428 196 9 121 chr13 37813275 37813391 -82470921 + PB1D9 SINE Alu 18 120 0 7 873 337 242 111 0 chr13 37813903 37814002 -82470310 + MLT1N2 LTR MaLR 75 184 -378 7 873 417 356 61 40 chr13 37814203 37814431 -82469881 + ORR1E LTR MaLR 1 233 -126 7 873 1810 178 64 40 chr13 37814432 37814490 -82469822 + ORR1A2 LTR MaLR 1 58 -326 7 873 2985 40 64 5 chr13 37814490 37814864 -82469448 + MTA_Mm LTR MaLR 1 396 0 7 873 1810 178 64 40 chr13 37814864 37815180 -82469132 + ORR1A2 LTR MaLR 59 384 0 7 873 1781 103 54 29 chr13 37815212 37815491 -82468821 + MT2B2 LTR ERVL 1 286 -298 7 873 8202 112 3 42 chr13 37815451 37815774 -82468538 + ORR1A2-int LTR MaLR 718 1032 -931 7 873 1141 56 14 7 chr13 37815774 37815919 -82468393 + B1_Mm SINE Alu 2 147 0 7 873 8202 112 3 42 chr13 37815919 37816892 -82467420 + ORR1A2-int LTR MaLR 1033 1963 0 7 873 2515 78 3 0 chr13 37816892 37817213 -82467099 + ORR1A2 LTR MaLR 1 322 -5 7 873 870 38 0 0 chr13 37817284 37817390 -82466922 + (TCTCCC)n Simple_repeat Simple_repeat 3 108 0 7 873 247 193 0 0 chr13 37817390 37817447 -82466865 + (TCTCTG)n Simple_repeat Simple_repeat 6 62 0 7 873 254 354 10 0 chr13 37817444 37817543 -82466769 + (CATATA)n Simple_repeat Simple_repeat 3 102 0 7 873 2752 58 3 9 chr13 37817560 37817908 -82466404 - ORR1A1 LTR MaLR 0 346 1 7 873 438 304 98 52 chr13 37817914 37818108 -82466204 - B4A SINE B4 -36 256 54 7 873 3166 51 3 0 chr13 37818109 37818499 -82465813 + MTB_Mm LTR MaLR 1 391 -16 7 873 261 266 24 37 chr13 37818482 37818564 -82465748 - ID2 SINE ID -1 82 2 7 873 604 231 29 88 chr13 37819047 37819251 -82465061 + B3A SINE B2 1 192 -6 7 873 21 0 0 0 chr13 37819299 37819320 -82464992 + AT_rich Low_complexity Low_complexity 1 21 0 7 873 1217 68 0 0 chr13 37819325 37819472 -82464840 + B1_Mm SINE Alu 1 147 0 7 873 647 229 46 0 chr13 37819950 37820081 -82464231 + B3A SINE B2 2 138 -60 7 873 477 247 18 181 chr13 37820081 37820177 -82464135 + B4A SINE B4 2 191 -101 7 873 239 233 100 0 chr13 37820257 37820317 -82463995 + ID4_ SINE ID 8 73 -10 7 873 311 330 73 9 chr13 37821282 37821392 -82462920 + MLT1I LTR MaLR 98 214 -197 7 873 352 244 77 11 chr13 37821612 37821703 -82462609 - B1F2 SINE Alu -46 103 7 7 873 223 324 0 14 chr13 37821742 37821814 -82462498 - MIRb SINE MIR -80 188 118 7 873 486 228 0 0 chr13 37821833 37821925 -82462387 + PB1D10 SINE Alu 3 94 -23 7 873 1410 79 0 0 chr13 37822308 37822486 -82461826 + B2_Mm2 SINE B2 2 179 -16 7 873 743 67 19 0 chr13 37822486 37822591 -82461721 + (GAAA)n Simple_repeat Simple_repeat 4 110 0 7 873 558 239 21 48 chr13 37823073 37823218 -82461094 + RSINE1 SINE B4 9 149 -16 7 873 201 74 0 0 chr13 37823254 37823281 -82461031 + (CA)n Simple_repeat Simple_repeat 1 27 0 7 873 640 295 133 25 chr13 37823281 37823633 -82460679 + MLT1A1 LTR MaLR 17 408 0 7 873 744 193 0 0 chr13 37823665 37823779 -82460533 + B1_Mur1 SINE Alu 1 114 -35 7 873 289 229 50 125 chr13 37824455 37824575 -82459737 - MIRc SINE MIR -145 123 13 7 873 552 320 72 67 chr13 37824575 37824906 -82459406 + MER58B DNA MER1_type 1 333 -8 7 873 1095 88 0 7 chr13 37824970 37825118 -82459194 + B1_Mus1 SINE Alu 2 148 0 7 873 570 231 59 15 chr13 37825627 37825763 -82458549 + B1_Mur3 SINE Alu 1 142 -7 7 873 257 267 163 0 chr13 37825930 37826013 -82458299 - MLT1C LTR MaLR -26 441 345 7 873 1017 265 43 20 chr13 37826013 37826313 -82457999 - MER57D LTR ERV1 -2 409 103 7 873 705 153 0 62 chr13 37826369 37826515 -82457797 + B1_Mus2 SINE Alu 11 147 0 7 873 190 233 117 85 chr13 37827873 37827967 -82456345 + MIRc SINE MIR 6 102 -166 7 873 440 271 43 43 chr13 37828122 37828134 -82456178 + B1F SINE Alu 9 85 -64 7 873 563 204 25 58 chr13 37828134 37828254 -82456058 + ID_B1 SINE B4 102 217 -7 7 873 1153 22 58 0 chr13 37828490 37828628 -82455684 + B1_Mm SINE Alu 2 147 0 7 873 1002 137 56 0 chr13 37828644 37828805 -82455507 + B2_Mm1t SINE B2 11 180 -13 7 873 296 169 0 36 chr13 37828821 37828888 -82455424 + B2_Mm2 SINE B2 47 109 -107 7 873 689 246 81 11 chr13 37829084 37829269 -82455043 + B3 SINE B2 2 199 -17 7 873 279 114 0 0 chr13 37829289 37829333 -82454979 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 873 25 31 0 0 chr13 37829336 37829368 -82454944 + AT_rich Low_complexity Low_complexity 1 32 0 7 873 905 188 97 46 chr13 37829857 37830052 -82454260 - B3 SINE B2 -10 206 2 7 873 399 68 0 0 chr13 37830084 37830143 -82454169 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 873 601 232 25 4 chr13 37830143 37830280 -82454032 - B3 SINE B2 -59 136 1 7 873 428 228 93 16 chr13 37830633 37830762 -82453550 + L1MB4 LINE L1 5734 5872 -308 7 873 2064 128 19 3 chr13 37830781 37831094 -82453218 - ORR1A3 LTR MaLR -8 318 1 7 873 704 243 21 0 chr13 37831162 37831302 -82453010 + RSINE1 SINE B4 3 145 -20 7 873 198 71 0 0 chr13 37831309 37831337 -82452975 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 873 1132 28 7 47 chr13 37831452 37831600 -82452712 + B1_Mm SINE Alu 3 144 -3 7 873 423 0 0 0 chr13 37831616 37831663 -82452649 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 873 234 191 0 0 chr13 37831716 37831758 -82452554 + PB1D9 SINE Alu 5 46 -74 7 873 315 0 0 0 chr13 37831898 37831933 -82452379 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 873 1506 217 55 59 chr13 37831940 37832361 -82451951 - MTD LTR MaLR 0 419 1 7 873 322 196 11 11 chr13 37832362 37832455 -82451857 + (TATG)n Simple_repeat Simple_repeat 1 93 0 7 873 225 286 115 24 chr13 37832459 37832624 -82451688 - L1M3 LINE L1 -289 5894 5715 7 873 628 233 70 0 chr13 37833267 37833396 -82450916 + B1_Mur1 SINE Alu 5 142 -7 7 873 496 150 254 9 chr13 37833498 37833612 -82450700 + B1_Mur2 SINE Alu 2 143 -6 7 873 370 287 7 68 chr13 37834542 37834688 -82449624 - ID_B1 SINE B4 0 224 88 7 873 779 309 32 52 chr13 37834708 37835018 -82449294 + MER2 DNA MER2_type 3 306 -39 7 873 1208 55 0 0 chr13 37835314 37835459 -82448853 + B1_Mus1 SINE Alu 4 148 0 7 873 1264 91 0 11 chr13 37835521 37835710 -82448602 - B2_Mm2 SINE B2 0 195 9 7 873 252 0 0 0 chr13 37835740 37835768 -82448544 + (A)n Simple_repeat Simple_repeat 1 28 0 7 873 416 104 15 0 chr13 37835840 37835907 -82448405 + (CA)n Simple_repeat Simple_repeat 2 69 0 7 873 656 301 24 10 chr13 37835910 37836118 -82448194 + B4A SINE B4 6 216 -76 7 873 1213 99 47 0 chr13 37836118 37836289 -82448023 + B2_Mm2 SINE B2 3 181 -14 7 873 349 135 67 46 chr13 37836306 37836420 -82447892 + B2_Mm2 SINE B2 47 192 -1 7 873 549 55 0 0 chr13 37836420 37836493 -82447819 + (GGAA)n Simple_repeat Simple_repeat 1 73 0 7 873 773 98 0 206 chr13 37836503 37836683 -82447629 + B1_Mus1 SINE Alu 6 148 0 7 873 189 0 0 0 chr13 37836690 37836711 -82447601 + (TA)n Simple_repeat Simple_repeat 1 21 0 7 873 207 0 0 0 chr13 37836711 37836734 -82447578 + (GA)n Simple_repeat Simple_repeat 1 23 0 7 873 663 48 0 0 chr13 37836734 37836817 -82447495 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 7 873 689 71 10 0 chr13 37836984 37837083 -82447229 - B1_Mur3 SINE Alu -7 142 43 7 873 655 184 13 60 chr13 37837377 37837527 -82446785 + B1_Mur1 SINE Alu 2 144 -5 7 873 409 252 9 18 chr13 37837744 37837853 -82446459 - PB1D10 SINE Alu 0 117 10 7 873 220 372 10 0 chr13 37837766 37837868 -82446444 - ID_B1 SINE B4 -48 176 74 7 873 688 272 15 71 chr13 37838302 37838571 -82445741 - MER2 DNA MER2_type -1 344 91 7 873 785 233 18 122 chr13 37838783 37839062 -82445250 + B4 SINE B4 41 290 -2 7 873 201 213 0 0 chr13 37839097 37839144 -82445168 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 873 240 86 0 0 chr13 37841271 37841306 -82443006 + (CCCCCG)n Simple_repeat Simple_repeat 2 36 0 7 873 613 257 14 14 chr13 37842339 37842481 -82441831 + RSINE1 SINE B4 2 143 -22 7 873 547 183 178 23 chr13 37842538 37842667 -82441645 - B1_Mur4 SINE Alu -1 149 1 7 873 310 204 38 5 chr13 37842947 37843044 -82441268 - B1_Mur1 SINE Alu -12 137 3 7 873 225 146 0 0 chr13 37843341 37843389 -82440923 + (TCTG)n Simple_repeat Simple_repeat 3 50 0 7 873 309 26 0 0 chr13 37843430 37843468 -82440844 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 873 214 129 16 16 chr13 37844668 37844731 -82439581 + (TTTG)n Simple_repeat Simple_repeat 1 63 0 7 873 777 136 53 0 chr13 37844737 37844869 -82439443 - B1_Mus1 SINE Alu 0 148 10 7 873 320 238 0 45 chr13 37844932 37845020 -82439292 + PB1D10 SINE Alu 34 117 0 7 873 576 13 0 13 chr13 37845084 37845163 -82439149 + L1Md_F2 LINE L1 6505 6582 0 8 873 2057 166 36 3 chr13 37846432 37846794 -82437518 - ORR1D1 LTR MaLR 0 374 1 8 873 192 77 0 0 chr13 37846797 37846823 -82437489 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 8 873 324 35 0 66 chr13 37846833 37846894 -82437418 + (TTTTTG)n Simple_repeat Simple_repeat 3 59 0 8 873 869 151 7 0 chr13 37846895 37847041 -82437271 - B1_Mus2 SINE Alu 0 147 1 8 873 322 239 0 0 chr13 37847097 37847164 -82437148 + MLT1F1 LTR MaLR 14 80 -489 8 873 1198 62 0 0 chr13 37847185 37847330 -82436982 + B1_Mm SINE Alu 1 145 -2 8 873 361 299 0 0 chr13 37847417 37847494 -82436818 + ID4_ SINE ID 3 79 -4 8 873 1694 174 154 42 chr13 37847562 37847939 -82436373 + MTC LTR MaLR 1 419 -2 8 873 1296 99 15 20 chr13 37847965 37848160 -82436152 + B2_Mm2 SINE B2 2 195 0 8 873 609 269 223 27 chr13 37848170 37848430 -82435882 + MLT1F1 LTR MaLR 233 564 -5 8 873 355 373 65 0 chr13 37848570 37848739 -82435573 + ORR1E LTR MaLR 1 180 -179 8 873 271 269 61 61 chr13 37848788 37848903 -82435409 + ORR1E LTR MaLR 256 370 -9 8 873 805 171 21 0 chr13 37848995 37849135 -82435177 + B1_Mur4 SINE Alu 2 144 -6 8 873 354 252 58 10 chr13 37849440 37849544 -82434768 + B1F SINE Alu 1 109 -40 8 873 287 264 64 0 chr13 37849764 37849849 -82434463 - B1F SINE Alu -7 113 15 8 873 1696 206 51 38 chr13 37850090 37850572 -82433740 - RMER4B LTR ERVK -24 587 17 8 873 745 237 15 40 chr13 37850675 37850877 -82433435 + B3A SINE B2 2 198 0 8 873 207 0 0 0 chr13 37851867 37851890 -82432422 + (A)n Simple_repeat Simple_repeat 1 23 0 8 873 261 0 0 0 chr13 37852706 37852735 -82431577 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 873 675 180 57 14 chr13 37854063 37854204 -82430108 + B1_Mus1 SINE Alu 1 147 -1 8 873 728 194 35 0 chr13 37854226 37854370 -82429942 + B1_Mur2 SINE Alu 1 149 0 8 873 478 229 131 0 chr13 37854396 37854518 -82429794 + B1_Mur1 SINE Alu 12 149 0 8 873 843 123 0 40 chr13 37854539 37854691 -82429621 + B1_Mus2 SINE Alu 1 146 -1 8 873 282 116 0 0 chr13 37855608 37855651 -82428661 + (TGG)n Simple_repeat Simple_repeat 2 44 0 8 873 231 317 50 99 chr13 37856052 37856213 -82428099 + MIRb SINE MIR 36 188 -80 8 873 362 266 84 23 chr13 37856696 37856827 -82427485 - MER2B DNA MER2_type -22 314 176 8 873 22 0 0 0 chr13 37856844 37856866 -82427446 + AT_rich Low_complexity Low_complexity 1 22 0 8 873 1158 191 19 0 chr13 37856908 37857118 -82427194 - B3 SINE B2 -2 214 1 8 873 391 319 51 120 chr13 37857256 37857424 -82426888 + ORR1E LTR MaLR 1 159 -200 8 873 1171 233 76 91 chr13 37857424 37857807 -82426505 - MTEa LTR MaLR -1 378 2 8 873 391 319 51 120 chr13 37857807 37858012 -82426300 + ORR1E LTR MaLR 160 348 -11 8 873 204 158 0 0 chr13 37858081 37858119 -82426193 + GA-rich Low_complexity Low_complexity 1 38 0 8 873 494 211 107 50 chr13 37858272 37858412 -82425900 - B1_Mur3 SINE Alu -1 148 1 8 873 217 255 25 210 chr13 37858448 37858463 -82425849 + PB1D9 SINE Alu 9 105 -15 8 873 579 183 10 0 chr13 37858463 37858566 -82425746 + ID_B1 SINE B4 105 208 -16 8 873 576 240 8 8 chr13 37858566 37858696 -82425616 + MTEa LTR MaLR 1 130 -249 8 873 977 123 12 30 chr13 37858979 37859146 -82425166 - MurERV4_19-int LTR ERVK -557 5223 5060 8 873 487 198 0 0 chr13 37859146 37859237 -82425075 + 4.5SRNA scRNA scRNA 1 91 -3 8 873 1171 55 7 7 chr13 37859240 37859387 -82424925 + B1_Mm SINE Alu 1 147 0 8 873 2157 105 0 41 chr13 37859390 37859729 -82424583 - MurERV4_19-int LTR ERVK -727 5053 4729 8 873 1295 69 0 0 chr13 37859729 37859889 -82424423 + L1Md_F2 LINE L1 5427 5586 -297 8 873 8051 50 8 9 chr13 37859889 37860885 -82423427 + L1Md_F2 LINE L1 5587 6581 -1 8 873 1661 102 0 0 chr13 37860906 37861132 -82423180 - MurERV4_19-int LTR ERVK -1037 4743 4518 8 873 902 252 8 16 chr13 37861132 37861382 -82422930 + MTEa LTR MaLR 129 376 -3 8 873 1912 156 79 20 chr13 37861625 37862017 -82422295 - MTC LTR MaLR -6 415 1 8 873 228 67 0 0 chr13 37862022 37862052 -82422260 + (A)n Simple_repeat Simple_repeat 1 30 0 8 873 373 320 10 0 chr13 37862136 37862239 -82422073 + PB1 SINE Alu 21 124 -3 8 873 23 33 0 0 chr13 37862239 37862269 -82422043 + AT_rich Low_complexity Low_complexity 1 30 0 8 873 235 241 0 0 chr13 37862782 37862840 -82421472 + (TA)n Simple_repeat Simple_repeat 2 59 0 8 873 189 0 0 0 chr13 37862895 37862916 -82421396 + (T)n Simple_repeat Simple_repeat 1 21 0 8 873 1134 62 14 0 chr13 37862918 37863062 -82421250 - B1_Mus1 SINE Alu -1 147 2 8 873 426 330 17 0 chr13 37863094 37863212 -82421100 + B1_Mur2 SINE Alu 3 122 -27 8 873 240 264 117 39 chr13 37863257 37863411 -82420901 - L1MC5 LINE L1 -179 7782 7617 8 873 317 346 0 37 chr13 37863535 37863643 -82420669 - B4A SINE B4 0 292 189 8 873 494 161 47 37 chr13 37863726 37863837 -82420475 - PB1D9 SINE Alu -1 148 15 8 873 215 147 0 0 chr13 37863851 37863885 -82420427 - B4A SINE B4 -251 41 8 8 873 539 286 21 21 chr13 37863905 37864048 -82420264 - B1F SINE Alu -6 143 1 8 873 1251 107 37 0 chr13 37864154 37864341 -82419971 - B2_Mm2 SINE B2 0 195 2 8 873 845 135 12 75 chr13 37864344 37864504 -82419808 - B1_Mur4 SINE Alu 0 150 1 8 873 469 259 67 51 chr13 37864577 37864748 -82419564 - B3 SINE B2 0 216 48 8 873 185 300 108 36 chr13 37864917 37865000 -82419312 + MIR3 SINE MIR 13 101 -107 8 873 1029 98 14 0 chr13 37865097 37865240 -82419072 - B1_Mur4 SINE Alu -1 149 5 8 873 391 195 0 0 chr13 37865377 37865464 -82418848 + MER2 DNA MER2_type 92 178 -167 8 873 243 326 63 7 chr13 37865536 37865678 -82418634 + ID_B1 SINE B4 52 201 -23 8 873 564 213 0 0 chr13 37865827 37865935 -82418377 + B1_Mus2 SINE Alu 8 115 -32 8 873 360 0 0 0 chr13 37865935 37865975 -82418337 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 873 192 152 0 0 chr13 37865989 37866022 -82418290 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 8 873 22 0 0 0 chr13 37866320 37866342 -82417970 + AT_rich Low_complexity Low_complexity 1 22 0 8 873 333 230 0 13 chr13 37866493 37866568 -82417744 - ID4 SINE ID -8 75 2 8 873 234 269 39 0 chr13 37866600 37866652 -82417660 - AluF_3 SINE Alu -102 209 156 8 873 493 15 30 0 chr13 37866691 37866757 -82417555 + (TC)n Simple_repeat Simple_repeat 1 68 0 8 873 332 239 123 44 chr13 37866899 37867013 -82417299 + RSINE1 SINE B4 2 124 -41 8 873 423 0 0 0 chr13 37867020 37867067 -82417245 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 873 706 205 147 61 chr13 37867266 37867463 -82416849 - B3 SINE B2 -1 215 2 8 873 831 178 7 20 chr13 37867561 37867710 -82416602 + B1_Mur3 SINE Alu 3 149 0 8 873 207 0 0 0 chr13 37867710 37867733 -82416579 + (A)n Simple_repeat Simple_repeat 1 23 0 8 873 1269 21 0 0 chr13 37867798 37867943 -82416369 + B1_Mm SINE Alu 2 146 -1 8 873 222 342 25 12 chr13 37868011 37868091 -82416221 - BC1_Mm scRNA scRNA -66 86 6 8 873 237 211 0 0 chr13 37868438 37868495 -82415817 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 873 302 358 0 0 chr13 37868513 37868633 -82415679 + (CA)n Simple_repeat Simple_repeat 1 120 0 8 873 222 284 13 13 chr13 37871541 37871616 -82412696 + GA-rich Low_complexity Low_complexity 3 77 0 8 873 418 348 22 72 chr13 37872138 37872153 -82412159 - ID_B1 SINE B4 -11 213 185 8 873 455 291 17 25 chr13 37872153 37872273 -82412039 - B1F2 SINE Alu -30 119 1 8 873 418 348 22 72 chr13 37872273 37872361 -82411951 - ID_B1 SINE B4 -11 184 2 8 873 973 242 0 14 chr13 37872475 37872689 -82411623 - B3 SINE B2 -5 211 1 8 873 420 302 0 0 chr13 37873066 37873162 -82411150 - RSINE1 SINE B4 -68 97 2 8 873 526 196 49 0 chr13 37873215 37873317 -82410995 + B1_Mus2 SINE Alu 1 107 -40 8 873 621 145 15 15 chr13 37873317 37873450 -82410862 + GA-rich Low_complexity Low_complexity 2 134 0 8 873 386 326 25 101 chr13 37873511 37873709 -82410603 + ID_B1 SINE B4 9 191 -33 8 873 557 243 18 0 chr13 37873613 37873724 -82410588 + B1_Mur1 SINE Alu 12 124 -25 8 873 546 203 7 13 chr13 37873868 37874018 -82410294 + (TA)n Simple_repeat Simple_repeat 1 149 0 8 873 324 0 0 0 chr13 37874774 37874810 -82409502 + (TC)n Simple_repeat Simple_repeat 2 37 0 8 873 357 24 0 0 chr13 37874810 37874851 -82409461 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 873 410 231 49 16 chr13 37874851 37874974 -82409338 + Tigger1 DNA MER2_type 2260 2386 -32 8 873 895 236 15 30 chr13 37875187 37875388 -82408924 + B3A SINE B2 1 198 0 8 873 607 218 211 6 chr13 37876806 37876972 -82407340 - B3A SINE B2 -15 201 2 8 873 1149 97 0 0 chr13 37877469 37877634 -82406678 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 8 873 378 310 19 84 chr13 37877895 37878050 -82406262 - ID_B1 SINE B4 -69 155 11 8 873 308 289 0 37 chr13 37878107 37878215 -82406097 + (TATATG)n Simple_repeat Simple_repeat 3 106 0 8 873 198 0 0 0 chr13 37879068 37879090 -82405222 + (T)n Simple_repeat Simple_repeat 1 22 0 8 873 694 34 0 0 chr13 37879225 37879313 -82404999 + BC1_Mm scRNA scRNA 2 89 -63 8 873 247 206 79 0 chr13 37879514 37879577 -82404735 + Charlie7a DNA MER1_type 41 108 -164 8 109 756 303 81 67 chr13 37879610 37880302 -82404010 - L1MB4 LINE L1 -2 6178 5477 8 874 344 283 0 103 chr13 37880321 37880447 -82403865 + PB1D9 SINE Alu 2 114 -6 8 874 420 55 0 0 chr13 37880528 37880583 -82403729 + (GTTTG)n Simple_repeat Simple_repeat 2 56 0 8 874 336 270 0 13 chr13 37880587 37880662 -82403650 - ID4_ SINE ID -8 75 2 8 874 401 36 18 0 chr13 37880717 37880772 -82403540 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 874 294 29 0 0 chr13 37881073 37881108 -82403204 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 8 874 489 239 0 0 chr13 37881123 37881232 -82403080 - ID_B1 SINE B4 -18 206 98 9 874 582 183 32 32 chr13 37881397 37881521 -82402791 + B1F1 SINE Alu 26 149 0 9 874 453 255 92 165 chr13 37881646 37881961 -82402351 + B4A SINE B4 1 292 0 9 874 443 214 128 43 chr13 37882559 37882676 -82401636 + B1_Mur1 SINE Alu 11 137 -12 9 874 302 272 0 24 chr13 37882792 37882875 -82401437 + ID4_ SINE ID 2 82 -1 9 874 1026 150 45 10 chr13 37883366 37883568 -82400744 - URR1B DNA MER1_type 0 225 17 9 874 1146 81 0 0 chr13 37883734 37883882 -82400430 - B1_Mus1 SINE Alu 0 148 1 9 874 210 268 0 0 chr13 37883925 37883981 -82400331 + (TA)n Simple_repeat Simple_repeat 2 57 0 9 874 308 184 12 24 chr13 37884648 37884730 -82399582 + L1MB4 LINE L1 5805 5884 -296 9 874 994 149 0 0 chr13 37885616 37885764 -82398548 - B1_Mur4 SINE Alu 0 150 3 9 874 253 211 80 53 chr13 37885790 37885865 -82398447 - ID4_ SINE ID -1 82 6 9 874 521 253 48 83 chr13 37886268 37886436 -82397876 + RSINE1 SINE B4 4 165 0 9 874 834 241 82 0 chr13 37886479 37886674 -82397638 + B3 SINE B2 1 211 -5 9 874 231 146 0 0 chr13 37886765 37886806 -82397506 + (ATGGTG)n Simple_repeat Simple_repeat 4 44 0 9 874 511 223 99 0 chr13 37886819 37886940 -82397372 - B1F SINE Alu -6 143 11 9 874 23 33 0 0 chr13 37887086 37887116 -82397196 + AT_rich Low_complexity Low_complexity 1 30 0 9 874 264 326 20 92 chr13 37887177 37887329 -82396983 + MIRb SINE MIR 34 174 -94 9 874 361 253 84 0 chr13 37887506 37887601 -82396711 + PB1D7 SINE Alu 1 103 -17 9 874 441 182 0 0 chr13 37887779 37887856 -82396456 + B3 SINE B2 1 77 -139 9 874 674 208 33 8 chr13 37888488 37888624 -82395688 - B1_Mur1 SINE Alu -183 131 1 9 874 764 229 198 28 chr13 37888769 37889088 -82395224 + Charlie1b DNA MER1_type 147 519 -4 9 874 283 253 25 51 chr13 37889157 37889236 -82395076 + ID4 SINE ID 4 80 -3 9 874 211 240 0 20 chr13 37889409 37889460 -82394852 - L2a LINE L2 -68 3358 3309 9 874 237 286 0 0 chr13 37889661 37889717 -82394595 + ID4_ SINE ID 18 73 -10 9 874 573 280 8 0 chr13 37890224 37890349 -82393963 - B1F SINE Alu -1 148 23 9 874 207 0 0 0 chr13 37890462 37890485 -82393827 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 874 426 231 28 46 chr13 37891099 37891208 -82393104 + B1F SINE Alu 36 142 -7 9 874 223 224 41 0 chr13 37891228 37891277 -82393035 + ID4 SINE ID 2 52 -31 9 874 335 286 112 8 chr13 37892090 37892224 -82392088 + MIRb SINE MIR 75 222 -46 9 874 272 326 43 0 chr13 37892346 37892438 -82391874 + PB1D10 SINE Alu 1 96 -21 9 874 1240 47 0 0 chr13 37892559 37892707 -82391605 + B1_Mus1 SINE Alu 1 148 0 9 874 429 20 0 0 chr13 37892748 37892798 -82391514 + (GA)n Simple_repeat Simple_repeat 2 51 0 9 874 471 35 0 0 chr13 37892798 37892855 -82391457 + (GGAA)n Simple_repeat Simple_repeat 4 60 0 9 874 340 243 25 75 chr13 37893364 37893484 -82390828 - BC1_Mm scRNA scRNA -37 115 2 9 874 869 241 111 39 chr13 37895084 37895416 -82388896 - L1MB3 LINE L1 -1 6182 5827 9 874 266 274 14 14 chr13 37895470 37895544 -82388768 - ID2 SINE ID -6 77 4 9 874 1151 200 5 19 chr13 37895579 37895793 -82388519 + B3 SINE B2 6 216 0 9 874 306 196 18 0 chr13 37895797 37895853 -82388459 + PB1D9 SINE Alu 10 66 -54 9 874 706 244 22 2 chr13 37895897 37896089 -82388223 - L1MB3 LINE L1 -515 5776 5568 9 874 490 286 31 98 chr13 37896275 37896438 -82387874 - RSINE1 SINE B4 -9 156 5 9 874 426 298 114 0 chr13 37896602 37896716 -82387596 - RSINE1 SINE B4 -37 128 2 9 874 323 346 40 55 chr13 37896966 37897038 -82387274 - B3A SINE B2 -1 197 2 9 874 467 323 24 0 chr13 37897038 37897165 -82387147 - RSINE1 SINE B4 -33 132 3 9 874 1456 70 37 0 chr13 37897177 37897364 -82386948 - B2_Mm2 SINE B2 0 195 2 9 874 207 0 0 0 chr13 37897374 37897397 -82386915 + (A)n Simple_repeat Simple_repeat 1 23 0 9 874 210 243 0 0 chr13 37897397 37897434 -82386878 - B1_Mur1 SINE Alu -13 136 100 9 874 255 125 0 0 chr13 37897594 37897634 -82386678 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 9 874 1469 51 0 6 chr13 37897634 37897810 -82386502 - B2_Mm2 SINE B2 -19 176 2 9 874 279 0 0 0 chr13 37897905 37897936 -82386376 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 9 874 629 216 9 0 chr13 37897961 37898077 -82386235 - B1_Mur4 SINE Alu -7 143 27 9 874 333 0 0 0 chr13 37898157 37898194 -82386118 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 874 2342 48 3 0 chr13 37898260 37898550 -82385762 - L1Md_F2 LINE L1 -1 6581 6291 9 874 241 283 0 0 chr13 37898598 37898651 -82385661 + MIRb SINE MIR 46 98 -170 9 874 382 350 53 30 chr13 37898722 37899022 -82385290 - L1M5 LINE L1 -1886 4260 3954 9 874 303 324 79 29 chr13 37899120 37899260 -82385052 - HAL1-3A_ME LINE L1 -427 2431 2285 9 874 696 209 29 22 chr13 37899260 37899397 -82384915 - B1_Mur2 SINE Alu -1 148 11 9 874 963 61 122 0 chr13 37899581 37899712 -82384600 + B1_Mus2 SINE Alu 1 147 0 9 874 207 0 0 0 chr13 37899713 37899736 -82384576 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 9 874 597 275 0 96 chr13 37899873 37900050 -82384262 - RSINE1 SINE B4 0 165 6 9 874 431 265 25 41 chr13 37900190 37900312 -82384000 - B1F SINE Alu -1 148 29 9 874 346 326 190 42 chr13 37900499 37900736 -82383576 - L1M5 LINE L1 -576 5548 5277 9 874 419 240 10 0 chr13 37900755 37900851 -82383461 + B1_Mur1 SINE Alu 37 133 -16 9 874 243 0 0 0 chr13 37900951 37900978 -82383334 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 874 535 243 119 49 chr13 37901367 37901510 -82382802 + RSINE1 SINE B4 13 165 0 9 874 694 275 12 24 chr13 37901656 37901820 -82382492 + B3A SINE B2 1 162 -36 9 874 297 0 0 0 chr13 37901829 37901862 -82382450 + (TC)n Simple_repeat Simple_repeat 2 34 0 9 874 198 0 0 0 chr13 37901863 37901885 -82382427 + (CA)n Simple_repeat Simple_repeat 2 23 0 9 874 473 248 10 10 chr13 37902027 37902129 -82382183 - PB1D9 SINE Alu -1 119 18 9 874 270 0 0 0 chr13 37902129 37902159 -82382153 + (ACCTG)n Simple_repeat Simple_repeat 5 34 0 9 874 626 290 56 19 chr13 37902380 37902594 -82381718 + ID_B1 SINE B4 2 223 -1 9 874 286 370 0 11 chr13 37902625 37902718 -82381594 - MIRb SINE MIR -10 258 167 9 874 1592 47 16 0 chr13 37902882 37903074 -82381238 + B2_Mm2 SINE B2 1 195 0 9 874 857 174 0 27 chr13 37903208 37903356 -82380956 - B1_Mur4 SINE Alu -6 144 1 9 874 293 197 115 0 chr13 37903399 37903460 -82380852 - PB1D9 SINE Alu -50 70 3 9 874 629 265 5 67 chr13 37903574 37903768 -82380544 + B3A SINE B2 1 182 -16 9 874 315 48 71 0 chr13 37903782 37903824 -82380488 + HAL1-2a_MD LINE L1 2353 2397 -627 9 874 351 265 86 67 chr13 37903836 37903941 -82380371 + ID_B1 SINE B4 105 211 -13 9 874 396 0 0 0 chr13 37904007 37904051 -82380261 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 874 314 266 6 37 chr13 37904377 37904469 -82379843 - MLT1B LTR MaLR -13 454 296 9 874 1002 223 24 9 chr13 37904469 37904682 -82379630 + B3 SINE B2 1 216 0 9 874 641 272 82 100 chr13 37904682 37904873 -82379439 - MLT1B LTR MaLR -100 367 170 9 874 266 246 15 0 chr13 37904873 37904938 -82379374 - ID4_ SINE ID -16 67 2 9 874 641 235 69 109 chr13 37904938 37905099 -82379213 - MLT1B LTR MaLR -284 183 2 9 874 273 364 63 9 chr13 37905138 37905249 -82379063 + B1F SINE Alu 3 119 -30 9 874 248 260 39 64 chr13 37905352 37905430 -82378882 - ID4 SINE ID -1 82 7 9 874 317 261 39 0 chr13 37905442 37905533 -82378779 - ID2 SINE ID -55 97 3 9 874 181 164 0 43 chr13 37905585 37905655 -82378657 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 9 874 553 289 76 13 chr13 37905874 37906032 -82378280 + ID_B1 SINE B4 2 169 -55 9 874 376 260 120 0 chr13 37905959 37906059 -82378253 + PB1D10 SINE Alu 5 116 -1 9 874 371 247 22 11 chr13 37906578 37906668 -82377644 + BC1_Mm scRNA scRNA 7 97 -55 9 874 609 269 49 6 chr13 37906975 37907158 -82377154 + Tigger15a DNA TcMar 192 382 -333 9 874 513 0 0 0 chr13 37907656 37907713 -82376599 + (TCC)n Simple_repeat Simple_repeat 3 59 0 9 874 225 176 0 89 chr13 37907713 37907760 -82376552 - ID_B1 SINE B4 -7 217 174 9 874 560 208 20 0 chr13 37907760 37907814 -82376498 - PB1D9 SINE Alu -7 113 11 9 874 312 259 0 34 chr13 37908330 37908418 -82375894 - MLT1B LTR MaLR -66 324 240 9 874 335 157 0 14 chr13 37908461 37908532 -82375780 + CT-rich Low_complexity Low_complexity 1 70 0 9 874 590 264 23 0 chr13 37908532 37908661 -82375651 - ID_B1 SINE B4 -9 215 84 9 874 285 281 110 40 chr13 37908663 37908777 -82375535 - MLT1A1 LTR MaLR -35 373 210 9 874 286 253 53 75 chr13 37908828 37908922 -82375390 - B1F2 SINE Alu -36 113 22 9 874 400 203 24 24 chr13 37908843 37908991 -82375321 - ID_B1 SINE B4 -41 183 1 9 874 388 255 10 10 chr13 37909042 37909141 -82375171 + PB1D10 SINE Alu 1 99 -18 9 874 207 0 0 0 chr13 37909150 37909173 -82375139 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 9 874 432 242 93 57 chr13 37909181 37909321 -82374991 - MLT1A LTR MaLR -227 147 3 9 874 290 227 112 11 chr13 37909435 37909524 -82374788 - MLT1B LTR MaLR -287 103 6 9 874 740 251 53 15 chr13 37909713 37909899 -82374413 - B3 SINE B2 -5 211 27 1 874 281 26 26 0 chr13 37909917 37909955 -82374357 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 874 760 114 179 0 chr13 37909955 37910078 -82374234 - B1_Mus1 SINE Alu -3 145 1 1 874 230 62 62 0 chr13 37910078 37910110 -82374202 - B3 SINE B2 -174 42 9 1 874 819 201 47 0 chr13 37910722 37910871 -82373441 + B3 SINE B2 1 156 -60 1 874 910 107 7 7 chr13 37910945 37911096 -82373216 + (TCCC)n Simple_repeat Simple_repeat 3 153 0 1 874 398 53 18 0 chr13 37911098 37911155 -82373157 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 874 564 310 45 10 chr13 37911352 37911551 -82372761 - MER20 DNA MER1_type -12 207 2 1 874 938 116 7 21 chr13 37911586 37911727 -82372585 + B1_Mus1 SINE Alu 10 148 0 1 874 252 242 84 77 chr13 37911600 37911743 -82372569 - YREP_Mm Unknown Unknown -1518 294 151 1 874 819 194 21 0 chr13 37911969 37912113 -82372199 - B1_Mur2 SINE Alu -2 147 1 1 874 322 351 88 15 chr13 37912293 37912498 -82371814 + MIR SINE MIR 28 247 -15 1 874 264 259 79 53 chr13 37913114 37913228 -82371084 - PB1D10 SINE Alu 0 117 1 1 874 212 322 28 92 chr13 37913454 37913704 -82370608 + L2c LINE L2 2923 3156 -231 1 874 474 18 0 0 chr13 37914080 37914135 -82370177 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 874 818 211 10 70 chr13 37914159 37914358 -82369954 - B3A SINE B2 -10 188 2 1 874 283 297 80 9 chr13 37914378 37914490 -82369822 - PB1D9 SINE Alu 0 120 1 1 874 527 269 165 17 chr13 37914646 37914945 -82369367 - L1M4 LINE L1 -435 5739 5398 1 874 241 230 104 30 chr13 37915083 37915170 -82369142 - B1F SINE Alu 0 149 5 1 874 240 35 0 0 chr13 37915173 37915202 -82369110 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 1 874 1102 60 0 0 chr13 37915262 37915395 -82368917 + B1_Mus1 SINE Alu 2 134 -14 1 874 304 324 29 10 chr13 37915523 37915626 -82368686 + B1F2 SINE Alu 2 106 -43 1 874 347 256 23 114 chr13 37915831 37915963 -82368349 + MT2B LTR ERVL 138 257 -344 1 874 1003 114 7 0 chr13 37915868 37916008 -82368304 + B1_Mur2 SINE Alu 9 149 0 1 874 270 136 0 0 chr13 37916010 37916054 -82368258 + (A)n Simple_repeat Simple_repeat 1 44 0 1 874 351 75 75 0 chr13 37916129 37916182 -82368130 + ID_B1 SINE B4 137 193 -31 1 874 21 36 0 0 chr13 37917645 37917673 -82366639 + GC_rich Low_complexity Low_complexity 1 28 0 1 874 23 33 0 0 chr13 37917963 37917993 -82366319 + GC_rich Low_complexity Low_complexity 1 30 0 1 874 210 71 0 0 chr13 37918470 37918498 -82365814 + (TCC)n Simple_repeat Simple_repeat 1 28 0 1 874 21 0 0 0 chr13 37919216 37919237 -82365075 + GC_rich Low_complexity Low_complexity 1 21 0 1 874 243 0 0 0 chr13 37921223 37921250 -82363062 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 874 206 222 0 0 chr13 37922915 37922951 -82361361 + polypurine Low_complexity Low_complexity 3 38 0 1 874 325 341 48 38 chr13 37924494 37924680 -82359632 - Tigger11a DNA MER2_type -64 671 484 1 874 1679 21 5 0 chr13 37926747 37926937 -82357375 + B2_Mm1a SINE B2 2 192 -1 1 874 1101 68 0 0 chr13 37926949 37927081 -82357231 + B1_Mus2 SINE Alu 3 134 -13 1 874 782 92 17 0 chr13 37927082 37927202 -82357110 + (GAAA)n Simple_repeat Simple_repeat 1 122 0 1 874 586 229 21 13 chr13 37927269 37927433 -82356879 + ID_B1 SINE B4 18 224 0 1 874 348 24 0 0 chr13 37927455 37927496 -82356816 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 874 466 241 69 35 chr13 37927569 37927685 -82356627 + ID_B1 SINE B4 85 204 -20 1 874 240 111 0 0 chr13 37927701 37927737 -82356575 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 1 874 1069 70 0 20 chr13 37927737 37927883 -82356429 - B1_Mus2 SINE Alu 0 147 5 1 874 260 306 153 0 chr13 37927918 37928003 -82356309 + PB1D10 SINE Alu 4 101 -16 1 874 217 158 52 17 chr13 37928133 37928191 -82356121 - B1_Mus2 SINE Alu 0 149 90 1 874 792 169 33 22 chr13 37928201 37928382 -82355930 - B3 SINE B2 -7 188 5 1 874 250 312 0 25 chr13 37928558 37928637 -82355675 - ID4_ SINE ID -4 79 3 1 874 268 286 116 74 chr13 37928690 37928818 -82355494 - PB1D10 SINE Alu 0 148 4 1 874 342 182 5 50 chr13 37928835 37928927 -82355385 + B1_Mus1 SINE Alu 35 125 -24 1 874 193 234 20 41 chr13 37929195 37929244 -82355068 - L2a LINE L2 -264 3162 3115 1 874 26 30 0 0 chr13 37929738 37929771 -82354541 + AT_rich Low_complexity Low_complexity 1 33 0 1 874 677 224 32 19 chr13 37929980 37930135 -82354177 - RSINE1 SINE B4 -6 159 3 1 874 762 144 15 36 chr13 37930994 37931131 -82353181 - B1_Mur4 SINE Alu -14 136 3 1 874 304 240 133 80 chr13 37931365 37931478 -82352834 + ID_B1 SINE B4 102 220 -4 1 874 24 32 0 0 chr13 37931508 37931539 -82352773 + AT_rich Low_complexity Low_complexity 1 31 0 1 874 282 248 159 19 chr13 37932004 37932111 -82352201 + MT2B LTR ERVL 119 240 -361 1 874 426 219 168 0 chr13 37932046 37932165 -82352147 + B1_Mur1 SINE Alu 6 144 -5 1 874 237 296 113 0 chr13 37932284 37932355 -82351957 - ID2 SINE ID -3 80 2 1 874 393 198 176 10 chr13 37932579 37932681 -82351631 - PB1D9 SINE Alu 0 120 2 1 874 213 286 107 0 chr13 37933142 37933226 -82351086 + RSINE1 SINE B4 8 100 -65 1 874 461 287 29 22 chr13 37933954 37934093 -82350219 - MIR SINE MIR -16 246 107 1 874 306 67 0 0 chr13 37934814 37934859 -82349453 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1 874 450 182 63 133 chr13 37934928 37935086 -82349226 - B1_Mm SINE Alu 0 147 1 1 874 312 217 58 0 chr13 37935296 37935365 -82348947 - B1F SINE Alu -66 83 11 1 874 358 328 51 8 chr13 37936211 37936328 -82347984 - B1F SINE Alu -27 122 1 1 874 259 97 0 65 chr13 37936474 37936522 -82347790 + T-rich Low_complexity Low_complexity 30 73 0 1 874 1231 34 7 0 chr13 37936522 37936668 -82347644 - B1_Mm SINE Alu 0 147 1 1 874 259 97 0 65 chr13 37936668 37936696 -82347616 + T-rich Low_complexity Low_complexity 3 29 0 1 874 22 0 0 0 chr13 37937421 37937443 -82346869 + AT_rich Low_complexity Low_complexity 1 22 0 1 874 331 221 29 14 chr13 37938141 37938210 -82346102 - L1MEg LINE L1 -4134 1950 1881 1 874 278 309 0 0 chr13 37938217 37938285 -82346027 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 1 874 325 258 163 9 chr13 37939945 37940069 -82344243 - MIRc SINE MIR -121 147 5 1 874 279 0 0 0 chr13 37940075 37940106 -82344206 + (T)n Simple_repeat Simple_repeat 1 31 0 1 874 1668 42 0 0 chr13 37940106 37940299 -82344013 - B2_Mm1t SINE B2 0 193 1 1 874 234 62 0 0 chr13 37940546 37940578 -82343734 + (T)n Simple_repeat Simple_repeat 1 32 0 1 874 1356 64 0 46 chr13 37941408 37941605 -82342707 + B2_Mm2 SINE B2 1 188 -7 1 874 758 131 13 70 chr13 37941706 37941862 -82342450 + B1_Mur3 SINE Alu 3 149 0 1 874 722 227 135 0 chr13 37941940 37942125 -82342187 - B3 SINE B2 -6 210 1 1 874 254 136 0 22 chr13 37942265 37942310 -82342002 - ID4_ SINE ID -36 47 4 1 874 1259 96 37 5 chr13 37942533 37942721 -82341591 + B2_Mm2 SINE B2 2 195 0 1 874 255 31 0 0 chr13 37942746 37942778 -82341534 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 1 874 246 174 0 0 chr13 37943259 37943305 -82341007 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 874 248 220 57 21 chr13 37943384 37943463 -82340849 + B1_Mur1 SINE Alu 18 127 -22 1 874 315 0 0 0 chr13 37945256 37945291 -82339021 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 874 1003 91 11 33 chr13 37945631 37945813 -82338499 + (TCCCC)n Simple_repeat Simple_repeat 3 180 0 1 874 207 100 0 0 chr13 37946432 37946462 -82337850 + (T)n Simple_repeat Simple_repeat 1 30 0 1 874 210 174 21 21 chr13 37950975 37951022 -82333290 - MER5B DNA MER1_type -69 109 63 1 874 291 28 0 0 chr13 37951146 37951182 -82333130 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 874 288 0 0 0 chr13 37951266 37951298 -82333014 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 874 311 286 121 10 chr13 37951329 37951428 -82332884 - RSINE1 SINE B4 -53 112 3 1 874 252 0 0 0 chr13 37952157 37952185 -82332127 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1 874 400 254 81 8 chr13 37952466 37952589 -82331723 + L1MA8 LINE L1 6133 6264 -27 1 874 223 212 60 15 chr13 37952608 37952675 -82331637 - ID2 SINE ID -11 72 3 1 874 26 30 0 0 chr13 37952699 37952732 -82331580 + AT_rich Low_complexity Low_complexity 1 33 0 1 874 219 69 0 0 chr13 37953157 37953186 -82331126 + (GTTTG)n Simple_repeat Simple_repeat 1 29 0 1 874 340 184 176 39 chr13 37953190 37953292 -82331020 - PB1D9 SINE Alu 0 120 5 1 874 228 111 0 0 chr13 37953329 37953365 -82330947 + (TCTG)n Simple_repeat Simple_repeat 1 36 0 1 874 223 59 59 0 chr13 37953365 37953399 -82330913 - PB1D7 SINE Alu -12 108 73 1 874 277 125 18 18 chr13 37954276 37954333 -82329979 + CT-rich Low_complexity Low_complexity 3 59 0 1 874 297 0 0 0 chr13 37954624 37954657 -82329655 + (GGGA)n Simple_repeat Simple_repeat 1 33 0 1 874 567 0 0 0 chr13 37955824 37955887 -82328425 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 1 874 326 194 0 27 chr13 37956005 37956079 -82328233 + PB1D9 SINE Alu 48 119 -1 1 874 751 204 51 0 chr13 37956093 37956250 -82328062 + B3 SINE B2 5 169 -47 1 874 510 141 76 0 chr13 37956597 37956689 -82327623 + B1_Mm SINE Alu 18 116 -31 1 874 352 131 14 14 chr13 37956805 37956875 -82327437 + CT-rich Low_complexity Low_complexity 4 73 0 1 874 1122 84 42 6 chr13 37956879 37957047 -82327265 - B2_Mm2 SINE B2 -20 175 2 1 874 580 194 197 17 chr13 37957115 37957293 -82327019 - B3 SINE B2 -6 210 1 1 874 28 0 0 0 chr13 37957308 37957336 -82326976 + AT_rich Low_complexity Low_complexity 1 28 0 1 874 661 249 85 40 chr13 37957447 37957623 -82326689 - B3A SINE B2 -6 192 9 1 874 275 278 0 85 chr13 37957647 37957753 -82326559 - PB1D10 SINE Alu 0 117 21 1 874 300 265 44 0 chr13 37959810 37959878 -82324434 + ID2 SINE ID 2 72 -11 1 874 298 255 120 20 chr13 37959904 37960004 -82324308 - PB1 SINE Alu -13 114 5 1 874 212 175 25 0 chr13 37960012 37960052 -82324260 + CT-rich Low_complexity Low_complexity 5 45 0 1 874 620 188 0 0 chr13 37960062 37960174 -82324138 - PB1D9 SINE Alu 0 120 9 1 874 307 244 11 58 chr13 37960098 37960185 -82324127 - B4A SINE B4 -123 169 87 1 874 268 281 88 0 chr13 37960736 37960850 -82323462 - MER2B DNA MER2_type -127 209 86 1 874 185 83 0 27 chr13 37961230 37961267 -82323045 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1 874 207 0 0 0 chr13 37961275 37961298 -82323014 + (GTTTG)n Simple_repeat Simple_repeat 3 25 0 1 874 215 278 0 18 chr13 37961732 37961787 -82322525 + MER5A DNA MER1_type 1 54 -135 1 874 181 331 115 23 chr13 37962134 37962264 -82322048 - MIRb SINE MIR -73 195 54 1 874 923 216 22 16 chr13 37963022 37963206 -82321106 + B3 SINE B2 2 186 -30 1 874 23 54 0 0 chr13 37963277 37963314 -82320998 + AT_rich Low_complexity Low_complexity 1 37 0 1 874 633 110 0 0 chr13 37963777 37963877 -82320435 + (TA)n Simple_repeat Simple_repeat 1 100 0 1 874 515 204 29 0 chr13 37964035 37964138 -82320174 + PB1D9 SINE Alu 2 107 -13 1 874 203 0 0 36 chr13 37964612 37964640 -82319672 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1 874 269 283 42 50 chr13 37964649 37964768 -82319544 - ID_B1 SINE B4 -2 222 105 1 874 311 277 53 18 chr13 37964791 37964905 -82319407 - ID_B1 SINE B4 -8 216 99 1 874 541 252 0 35 chr13 37965960 37966075 -82318237 + PB1D9 SINE Alu 2 112 -8 1 874 554 167 0 9 chr13 37966078 37966187 -82318125 + (TA)n Simple_repeat Simple_repeat 2 109 0 1 874 596 152 59 81 chr13 37966283 37966419 -82317893 - B1_Mur1 SINE Alu -11 138 6 1 874 256 284 40 0 chr13 37967302 37967376 -82316936 - B1F SINE Alu -27 122 46 1 874 24 53 0 0 chr13 37967407 37967445 -82316867 + AT_rich Low_complexity Low_complexity 1 38 0 1 874 831 241 48 33 chr13 37967518 37967728 -82316584 - B3 SINE B2 -3 213 1 1 874 520 248 35 17 chr13 37967733 37967848 -82316464 - RSINE1 SINE B4 -48 117 1 1 874 262 266 12 25 chr13 37967952 37968033 -82316279 - ID4_ SINE ID -3 80 1 1 874 26 0 0 0 chr13 37968782 37968808 -82315504 + AT_rich Low_complexity Low_complexity 1 26 0 1 874 282 29 0 0 chr13 37969133 37969168 -82315144 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 1 874 225 0 0 0 chr13 37969719 37969744 -82314568 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 874 180 0 0 0 chr13 37970019 37970039 -82314273 + (CATAG)n Simple_repeat Simple_repeat 2 21 0 1 874 1189 21 28 0 chr13 37970130 37970271 -82314041 + B1_Mus2 SINE Alu 3 147 0 1 874 418 283 9 19 chr13 37970314 37970422 -82313890 + PB1D10 SINE Alu 6 112 -5 1 874 707 242 0 37 chr13 37970569 37970732 -82313580 + RSINE1 SINE B4 7 163 -2 1 874 28 0 0 0 chr13 37973230 37973258 -82311054 + AT_rich Low_complexity Low_complexity 1 28 0 1 874 264 221 67 0 chr13 37973373 37973439 -82310873 + RSINE1 SINE B4 3 72 -220 1 874 376 155 178 17 chr13 37973502 37973620 -82310692 + MTD LTR MaLR 212 348 -71 1 874 223 259 0 0 chr13 37974845 37974899 -82309413 - ID4_ SINE ID -2 81 28 1 874 300 327 94 25 chr13 37975695 37975855 -82308457 + Tigger5 DNA MER2_type 67 237 -2169 1 874 699 249 60 15 chr13 37976063 37976263 -82308049 - B3 SINE B2 -6 210 2 1 874 283 299 11 11 chr13 37978824 37978912 -82305400 - BC1_Mm scRNA scRNA -64 88 1 1 874 235 264 19 0 chr13 37978996 37979049 -82305263 - ID4 SINE ID -16 67 14 1 874 278 258 31 6 chr13 37980333 37980413 -82303899 - ID4 SINE ID -56 96 17 1 874 397 263 61 0 chr13 37981352 37981466 -82302846 - RSINE1 SINE B4 -28 137 17 1 874 221 147 0 0 chr13 37982564 37982598 -82301714 + B1_Mus2 SINE Alu 2 35 -112 1 874 258 32 0 0 chr13 37982607 37982638 -82301674 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 874 223 130 0 42 chr13 37982866 37982914 -82301398 + PB1D10 SINE Alu 71 116 -1 1 874 590 232 7 21 chr13 37982965 37983110 -82301202 + B1_Mur2 SINE Alu 7 149 0 1 874 271 255 58 58 chr13 37984239 37984343 -82299969 - PB1D10 SINE Alu 0 117 14 1 874 372 298 0 19 chr13 37984848 37984954 -82299358 + B4A SINE B4 2 105 -187 1 874 180 0 0 0 chr13 37984971 37984991 -82299321 + (CACCC)n Simple_repeat Simple_repeat 1 20 0 1 874 658 174 65 7 chr13 37985314 37985453 -82298859 + B1F SINE Alu 1 147 -2 1 874 203 0 0 36 chr13 37985465 37985493 -82298819 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1 874 186 43 0 0 chr13 37986954 37986977 -82297335 + (TC)n Simple_repeat Simple_repeat 1 23 0 1 874 297 220 108 21 chr13 37988078 37988171 -82296141 - PB1 SINE Alu -4 123 23 1 874 198 0 0 0 chr13 37988408 37988430 -82295882 + (T)n Simple_repeat Simple_repeat 1 22 0 1 874 313 308 56 0 chr13 37989837 37989944 -82294368 + B1F SINE Alu 11 123 -26 1 874 189 0 0 0 chr13 37991743 37991764 -82292548 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 874 216 222 0 53 chr13 37992469 37992526 -82291786 + MIRb SINE MIR 215 268 0 1 874 25 0 0 0 chr13 37992616 37992641 -82291671 + AT_rich Low_complexity Low_complexity 1 25 0 1 874 574 298 100 53 chr13 37992861 37993284 -82291028 - L1M4 LINE L1 -1843 4303 3866 1 874 198 0 0 0 chr13 37993537 37993559 -82290753 + (GTTTG)n Simple_repeat Simple_repeat 2 23 0 1 874 539 213 45 69 chr13 37993798 37994000 -82290312 - B3A SINE B2 0 198 2 1 874 433 177 156 0 chr13 37994248 37994344 -82289968 - B1_Mur2 SINE Alu -36 113 3 1 874 361 202 69 69 chr13 37994344 37994373 -82289939 - MT2B LTR ERVL -434 167 139 1 874 467 229 33 0 chr13 37994379 37994501 -82289811 - L1M4 LINE L1 -3205 2941 2816 1 874 264 59 0 0 chr13 37995149 37995183 -82289129 + (T)n Simple_repeat Simple_repeat 1 34 0 1 874 1030 64 0 0 chr13 37995758 37995898 -82288414 - B1_Mus2 SINE Alu -2 145 6 1 874 252 0 0 0 chr13 37995979 37996007 -82288305 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 874 1028 230 29 47 chr13 37996041 37996319 -82287993 - B4A SINE B4 -19 273 1 1 874 304 268 20 20 chr13 37997645 37997744 -82286568 - PB1 SINE Alu -3 124 26 1 874 266 226 40 73 chr13 37997925 37998049 -82286263 + PB1D7 SINE Alu 1 120 0 1 874 212 241 18 53 chr13 38000565 38000622 -82283690 - MER91B DNA Tip100 -34 156 102 1 874 328 188 163 12 chr13 38001514 38001600 -82282712 - PB1D10 SINE Alu 0 117 19 2 874 217 342 26 43 chr13 38004202 38004318 -82279994 + L3 LINE CR1 4118 4231 -258 3 874 373 237 21 31 chr13 38005844 38005940 -82278372 + B1_Mur1 SINE Alu 55 149 0 4 874 405 267 102 15 chr13 38006575 38006712 -82277600 + B1F1 SINE Alu 1 149 0 5 874 214 324 27 0 chr13 38006729 38006803 -82277509 + ID4 SINE ID 6 81 -2 6 874 221 224 57 43 chr13 38006831 38006901 -82277411 + BC1_Mm scRNA scRNA 6 76 -76 7 874 207 218 0 0 chr13 38008145 38008200 -82276112 + (TGGA)n Simple_repeat Simple_repeat 1 55 0 8 874 673 222 88 7 chr13 38009740 38009876 -82274436 - B1_Mur2 SINE Alu -1 148 2 9 875 225 247 186 12 chr13 38013249 38013335 -82270977 + MIRm SINE MIR 66 166 -110 1 875 207 0 0 0 chr13 38013414 38013437 -82270875 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 875 456 252 62 62 chr13 38014072 38014216 -82270096 - B1_Mur2 SINE Alu -1 148 5 1 875 379 275 140 23 chr13 38014244 38014415 -82269897 - B3A SINE B2 -6 192 2 1 875 397 274 5 28 chr13 38014438 38014576 -82269736 - PB1D7 SINE Alu -3 146 1 1 875 321 317 39 54 chr13 38015105 38015235 -82269077 - ID_B1 SINE B4 -21 203 76 1 875 263 302 16 0 chr13 38015584 38015647 -82268665 - tRNA-Ala-GCA tRNA tRNA -11 64 1 1 875 180 0 0 0 chr13 38017197 38017217 -82267095 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1 875 928 123 258 16 chr13 38017258 38017440 -82266872 - URR1A DNA MER1_type 0 226 1 1 875 798 76 246 0 chr13 38017510 38017628 -82266684 + B1_Mm SINE Alu 1 147 0 1 875 375 305 11 0 chr13 38017638 38017733 -82266579 + B1_Mur3 SINE Alu 27 122 -27 2 875 180 0 0 0 chr13 38019473 38019493 -82264819 + (TGG)n Simple_repeat Simple_repeat 1 20 0 2 875 411 38 0 0 chr13 38019494 38019547 -82264765 + (GGA)n Simple_repeat Simple_repeat 3 55 0 2 875 626 213 50 22 chr13 38019714 38019853 -82264459 + B1_Mus2 SINE Alu 3 145 -2 2 875 226 311 73 16 chr13 38020070 38020194 -82264118 - ORR1A4 LTR MaLR -29 300 170 2 875 435 264 113 34 chr13 38020490 38020647 -82263665 - B3A SINE B2 -17 181 1 2 875 223 191 0 0 chr13 38020923 38020965 -82263347 - PB1D10 SINE Alu -45 72 31 2 875 518 259 135 6 chr13 38021096 38021259 -82263053 + RMER30 DNA MER1_type 2 185 -17 2 875 466 223 40 97 chr13 38025562 38025686 -82258626 + RSINE1 SINE B4 48 164 -1 2 875 450 0 0 0 chr13 38025686 38025736 -82258576 + (GA)n Simple_repeat Simple_repeat 2 51 0 2 875 905 201 44 6 chr13 38026543 38026723 -82257589 - B3A SINE B2 -10 188 2 3 875 218 205 0 0 chr13 38027124 38027163 -82257149 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 875 366 309 14 54 chr13 38027486 38027633 -82256679 + B3A SINE B2 57 197 -1 3 875 1178 30 166 30 chr13 38027932 38028101 -82256211 + B2_Mm2 SINE B2 1 192 -3 3 875 855 151 131 17 chr13 38028374 38028549 -82255763 + RLTR17 LTR ERVK 1 195 -497 3 875 2573 189 116 39 chr13 38028562 38028664 -82255648 - RMER3D-int LTR ERVK -1 2841 2713 3 875 1404 62 6 0 chr13 38028664 38028840 -82255472 + B2_Mm2 SINE B2 3 179 -16 3 875 2573 189 116 39 chr13 38028840 38029566 -82254746 - RMER3D-int LTR ERVK -130 2712 1950 3 875 309 189 102 47 chr13 38029646 38029774 -82254538 - RMER3D-int LTR ERVK -1692 1150 1016 3 875 3581 192 63 62 chr13 38029780 38031047 -82253265 - RMER3D-int LTR ERVK -978 1864 378 3 875 1161 233 85 74 chr13 38031060 38031532 -82252780 - RMER3D-int LTR ERVK -2365 477 1 3 875 569 213 101 37 chr13 38031550 38031814 -82252498 - RMER3D-int LTR ERVK -2365 477 273 3 875 317 367 6 23 chr13 38032396 38032569 -82251743 + CT-rich Low_complexity Low_complexity 2 171 0 3 875 183 129 0 0 chr13 38032962 38032993 -82251319 + (C)n Simple_repeat Simple_repeat 1 31 0 4 875 268 259 142 67 chr13 38035483 38035603 -82248709 - ID_B1 SINE B4 -4 220 92 4 875 640 184 73 57 chr13 38036032 38036204 -82248108 - B2_Mm2 SINE B2 -5 211 25 4 875 835 241 79 90 chr13 38036791 38036868 -82247444 + B4A SINE B4 14 88 -204 4 875 213 39 0 0 chr13 38036868 38036894 -82247418 + (GGAA)n Simple_repeat Simple_repeat 4 29 0 4 875 835 241 79 90 chr13 38036894 38037029 -82247283 + B4A SINE B4 89 215 -77 4 875 231 36 0 0 chr13 38037029 38037057 -82247255 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 4 875 835 241 79 90 chr13 38037057 38037121 -82247191 + B4A SINE B4 216 287 -5 4 875 540 100 0 0 chr13 38037743 38037823 -82246489 + (TTCC)n Simple_repeat Simple_repeat 4 83 0 4 875 328 303 90 0 chr13 38037845 38037934 -82246378 - PB1D7 SINE Alu -22 98 2 4 875 198 91 0 0 chr13 38041774 38041807 -82242505 + (TTA)n Simple_repeat Simple_repeat 1 33 0 4 875 360 119 0 0 chr13 38042869 38042928 -82241384 + (TTA)n Simple_repeat Simple_repeat 2 60 0 4 875 218 32 32 0 chr13 38043334 38043365 -82240947 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 875 486 295 40 108 chr13 38044015 38044261 -82240051 + B4A SINE B4 1 229 -63 5 875 371 252 48 48 chr13 38044261 38044365 -82239947 + RSINE1 SINE B4 2 105 -60 5 875 1420 160 137 4 chr13 38045169 38045439 -82238873 - MTD LTR MaLR -5 414 109 5 875 1297 96 32 11 chr13 38045440 38045614 -82238698 + B2_Mm1t SINE B2 1 179 -14 5 875 1216 48 7 0 chr13 38045614 38045760 -82238552 + B1_Mus1 SINE Alu 2 148 0 5 875 1297 96 32 11 chr13 38045760 38045774 -82238538 + B2_Mm1t SINE B2 180 193 0 5 875 391 78 27 20 chr13 38045864 38045976 -82238336 + B2_Mm2 SINE B2 47 195 0 5 875 456 104 0 0 chr13 38046046 38046113 -82238199 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 5 875 493 181 3 0 chr13 38046541 38046632 -82237680 - B1_Mus2 SINE Alu -53 95 3 5 875 449 171 98 0 chr13 38046905 38046987 -82237325 + B1_Mur3 SINE Alu 8 97 -52 5 875 180 77 0 0 chr13 38046996 38047022 -82237290 + (G)n Simple_repeat Simple_repeat 1 26 0 6 875 1222 269 137 11 chr13 38047208 38047580 -82236732 - MTD LTR MaLR 0 419 1 6 875 282 351 94 33 chr13 38047664 38047844 -82236468 - ORR1E LTR MaLR -168 191 1 6 875 658 123 226 0 chr13 38048134 38048240 -82236072 - B1_Mus1 SINE Alu -17 131 2 6 875 279 243 329 0 chr13 38048248 38048413 -82235899 - L1MB4 LINE L1 -47 6133 5915 6 875 1316 195 131 44 chr13 38048607 38048950 -82235362 + MTEa LTR MaLR 7 379 0 6 875 180 0 0 0 chr13 38049101 38049121 -82235191 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 875 1294 164 10 0 chr13 38049839 38050047 -82234265 + B3 SINE B2 1 210 -6 6 875 192 77 0 0 chr13 38050080 38050106 -82234206 + (AGGGGG)n Simple_repeat Simple_repeat 4 29 0 6 875 475 252 0 36 chr13 38050130 38050241 -82234071 + PB1D10 SINE Alu 1 107 -10 6 875 1163 62 7 0 chr13 38050241 38050385 -82233927 + B1_Mus2 SINE Alu 1 146 -1 7 875 232 369 58 53 chr13 38050505 38050694 -82233618 - ORR1E LTR MaLR -144 215 26 7 875 799 200 136 38 chr13 38050847 38051144 -82233168 - ORR1D2 LTR MaLR 0 370 11 7 875 633 213 0 38 chr13 38051664 38051796 -82232516 + B1_Mur2 SINE Alu 23 149 0 7 875 796 75 9 0 chr13 38052259 38052366 -82231946 + B2_Mm1t SINE B2 1 108 -85 7 875 279 0 0 0 chr13 38052429 38052460 -82231852 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 7 875 852 210 10 102 chr13 38052736 38052932 -82231380 + B3 SINE B2 23 200 -16 7 875 3097 70 22 12 chr13 38052946 38053353 -82230959 + RLTR10A LTR ERVK 1 411 0 7 875 244 238 0 0 chr13 38053440 38053482 -82230830 - RSINE1 SINE B4 -29 136 95 7 875 367 289 94 65 chr13 38053526 38053630 -82230682 - MER2 DNA MER2_type -164 181 69 7 875 1217 68 0 0 chr13 38053630 38053777 -82230535 - B1_Mus1 SINE Alu -1 147 1 8 875 367 289 94 65 chr13 38053777 38053842 -82230470 - MER2 DNA MER2_type -277 68 7 7 875 528 238 70 58 chr13 38054304 38054460 -82229852 - MT2A LTR ERVL -360 173 16 8 875 252 317 12 12 chr13 38055508 38055591 -82228721 + GA-rich Low_complexity Low_complexity 2 84 0 8 875 432 0 0 0 chr13 38056852 38056900 -82227412 + (TC)n Simple_repeat Simple_repeat 1 48 0 8 875 262 200 0 0 chr13 38056902 38056947 -82227365 - B1_Mus2 SINE Alu -102 45 1 8 875 201 241 0 0 chr13 38058475 38058529 -82225783 + (CAATT)n Simple_repeat Simple_repeat 4 57 0 8 875 552 30 0 0 chr13 38058557 38058623 -82225689 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 875 449 217 0 0 chr13 38060081 38060164 -82224148 + B4A SINE B4 1 83 -209 8 875 1272 74 63 0 chr13 38060569 38060744 -82223568 - B2_Mm1t SINE B2 -6 187 2 8 875 508 189 217 16 chr13 38061518 38061647 -82222665 - RSINE1 SINE B4 -8 157 3 8 875 217 354 0 0 chr13 38062615 38062694 -82221618 - ID4 SINE ID -2 81 3 9 875 414 0 0 0 chr13 38063699 38063745 -82220567 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 875 300 239 0 0 chr13 38063873 38063940 -82220372 - ID4 SINE ID -15 68 2 9 875 466 207 53 18 chr13 38063940 38064051 -82220261 - B1F SINE Alu -9 140 26 9 875 489 198 89 0 chr13 38064197 38064298 -82220014 - PB1D9 SINE Alu -8 112 3 9 875 982 128 7 0 chr13 38065624 38065765 -82218547 - B1_Mur4 SINE Alu 0 150 9 9 875 446 303 80 75 chr13 38065627 38065827 -82218485 - B4 SINE B4 -69 223 23 9 875 468 187 77 0 chr13 38066632 38066723 -82217589 - B3A SINE B2 -100 98 1 9 875 410 261 162 40 chr13 38066850 38066998 -82217314 - B4 SINE B4 -125 167 2 9 875 21 0 0 0 chr13 38067003 38067024 -82217288 + AT_rich Low_complexity Low_complexity 1 21 0 9 875 1348 93 44 0 chr13 38067035 38067218 -82217094 - B2_Mm2 SINE B2 -2 193 3 1 875 439 221 75 28 chr13 38067261 38067368 -82216944 - B1_Mur1 SINE Alu -16 133 22 1 875 379 288 36 0 chr13 38067741 38067852 -82216460 - PB1D10 SINE Alu -1 116 2 1 875 204 40 0 0 chr13 38067975 38068000 -82216312 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 875 243 0 0 0 chr13 38068229 38068256 -82216056 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 875 198 0 0 0 chr13 38071392 38071414 -82212898 + (A)n Simple_repeat Simple_repeat 1 22 0 1 875 227 79 26 0 chr13 38071746 38071784 -82212528 + (CCCA)n Simple_repeat Simple_repeat 3 41 0 1 875 286 208 83 83 chr13 38071985 38072069 -82212243 + ID_B1 SINE B4 79 162 -62 1 875 230 247 51 13 chr13 38072356 38072434 -82211878 + B4 SINE B4 86 166 -126 1 875 294 227 45 0 chr13 38072600 38072666 -82211646 + PB1 SINE Alu 46 114 -13 1 875 290 299 49 30 chr13 38073687 38073793 -82210519 - B1F1 SINE Alu -22 98 2 1 875 729 258 93 19 chr13 38073852 38074121 -82210191 - B4 SINE B4 -1 291 3 1 875 950 169 65 16 chr13 38074522 38074708 -82209604 - B3 SINE B2 -21 195 1 1 875 769 182 35 0 chr13 38075418 38075561 -82208751 - B1_Mus1 SINE Alu 0 148 1 1 875 514 277 18 54 chr13 38075709 38075877 -82208435 + RSINE1 SINE B4 3 164 -1 1 875 418 206 135 53 chr13 38076150 38076165 -82208147 + B1F SINE Alu 6 144 0 1 875 478 223 71 9 chr13 38076165 38076278 -82208034 + ID_B1 SINE B4 105 224 0 1 875 736 178 37 0 chr13 38076413 38076548 -82207764 + B1_Mur1 SINE Alu 1 140 -9 1 875 449 220 98 33 chr13 38076562 38076684 -82207628 + B1F1 SINE Alu 13 142 -7 1 875 222 235 59 0 chr13 38076688 38076739 -82207573 + ID SINE ID 2 55 -169 1 875 917 104 54 20 chr13 38078398 38078545 -82205767 + B2_Mm2 SINE B2 37 188 -7 1 875 424 261 164 45 chr13 38080176 38080377 -82203935 + MIRb SINE MIR 29 253 -15 1 875 402 261 15 0 chr13 38080726 38080816 -82203496 + PB1D10 SINE Alu 1 100 -47 1 875 276 100 0 0 chr13 38080826 38080866 -82203446 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 875 215 233 23 0 chr13 38081002 38081045 -82203267 - B4 SINE B4 -201 91 48 1 875 364 225 0 0 chr13 38081105 38081176 -82203136 + RSINE1 SINE B4 2 72 -93 1 875 1015 216 15 5 chr13 38082659 38082859 -82201453 - B3 SINE B2 -11 205 4 1 875 734 62 257 9 chr13 38083040 38083153 -82201159 + B1_Mus1 SINE Alu 1 141 -7 1 875 345 47 0 0 chr13 38083153 38083196 -82201116 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 875 253 241 17 0 chr13 38083410 38083468 -82200844 + B3A SINE B2 5 63 -135 1 875 1216 61 0 0 chr13 38083689 38083836 -82200476 - B1_Mus2 SINE Alu 0 147 1 1 875 30 0 0 0 chr13 38083981 38084011 -82200301 + AT_rich Low_complexity Low_complexity 1 30 0 1 875 191 61 30 0 chr13 38084196 38084229 -82200083 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 1 875 438 215 0 0 chr13 38084239 38084318 -82199994 + RSINE1 SINE B4 1 79 -86 1 875 28 0 0 0 chr13 38084378 38084406 -82199906 + AT_rich Low_complexity Low_complexity 1 28 0 1 875 544 223 44 33 chr13 38084864 38085045 -82199267 + ID_B1 SINE B4 32 214 -10 1 875 23 0 0 0 chr13 38086329 38086352 -82197960 + AT_rich Low_complexity Low_complexity 1 23 0 1 875 592 243 7 7 chr13 38086352 38086493 -82197819 + B1F SINE Alu 1 141 -8 1 875 248 321 12 58 chr13 38086589 38086675 -82197637 - RSINE1 SINE B4 -36 129 48 1 875 1575 188 83 17 chr13 38086856 38087207 -82197105 - ORR1D1 LTR MaLR 0 374 1 1 875 1514 132 73 22 chr13 38087559 38087672 -82196640 + MYSERV16_I-int LTR ERVK 1994 2105 -221 1 875 2914 80 25 10 chr13 38087672 38088066 -82196246 + MTB LTR MaLR 1 400 0 1 875 1514 132 73 22 chr13 38088066 38088269 -82196043 + MYSERV16_I-int LTR ERVK 2106 2326 0 1 875 2444 178 128 11 chr13 38088270 38088655 -82195657 + RLTR20C LTR ERVK 3 434 -100 1 875 468 0 0 0 chr13 38088655 38088707 -82195605 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 875 2444 178 128 11 chr13 38088707 38088797 -82195515 + RLTR20C LTR ERVK 435 534 0 1 875 1676 170 84 37 chr13 38088838 38089193 -82195119 + ORR1C2 LTR MaLR 1 372 -12 1 875 239 214 0 0 chr13 38089591 38089633 -82194679 + B3 SINE B2 36 77 -139 1 875 372 298 26 9 chr13 38089780 38089895 -82194417 - PB1D10 SINE Alu 0 117 1 1 875 277 303 52 15 chr13 38090224 38090358 -82193954 + L2 LINE L2 1542 1680 -1739 1 875 1086 179 60 63 chr13 38090607 38090941 -82193371 + RLTR15 LTR ERVK 10 342 -17 1 875 210 37 0 0 chr13 38091015 38091042 -82193270 + (CTA)n Simple_repeat Simple_repeat 2 28 0 1 875 402 57 0 0 chr13 38091244 38091297 -82193015 + (GGA)n Simple_repeat Simple_repeat 2 54 0 1 875 751 271 68 128 chr13 38091396 38091534 -82192778 - ORR1C2 LTR MaLR 0 374 213 1 875 2285 104 0 58 chr13 38091534 38091881 -82192431 - ORR1A2 LTR MaLR 0 327 1 1 875 889 164 24 123 chr13 38091881 38092140 -82192172 - ORR1C2 LTR MaLR -162 212 1 1 875 199 309 36 0 chr13 38092432 38092487 -82191825 - MIRc SINE MIR -200 68 12 1 875 372 303 73 0 chr13 38092547 38092656 -82191656 + PB1D10 SINE Alu 1 117 0 1 875 468 0 0 0 chr13 38092839 38092891 -82191421 + (TCTA)n Simple_repeat Simple_repeat 4 55 0 1 875 789 171 0 67 chr13 38093603 38093753 -82190559 - B1F SINE Alu -3 146 7 1 875 1026 133 49 16 chr13 38094445 38094628 -82189684 - B2_Mm2 SINE B2 -6 189 1 1 875 732 203 7 7 chr13 38094682 38094821 -82189491 - B1_Mur3 SINE Alu -10 139 1 1 875 275 26 0 49 chr13 38094844 38094885 -82189427 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 1 875 1901 157 112 11 chr13 38095416 38095765 -82188547 - ORR1B1 LTR MaLR -10 384 1 1 875 1136 50 28 0 chr13 38097300 38097441 -82186871 - B1_Mus1 SINE Alu -1 147 3 1 875 931 307 14 28 chr13 38097566 38097854 -82186458 + B4 SINE B4 9 292 0 1 875 270 0 0 0 chr13 38097874 38097904 -82186408 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 875 693 230 81 64 chr13 38098403 38098575 -82185737 + B3A SINE B2 22 196 -2 1 875 31 0 0 0 chr13 38098921 38098952 -82185360 + AT_rich Low_complexity Low_complexity 1 31 0 1 875 234 288 75 0 chr13 38099396 38099476 -82184836 + PB1D10 SINE Alu 12 97 -20 1 875 299 91 0 35 chr13 38100064 38100121 -82184191 + (CAGAGA)n Simple_repeat Simple_repeat 4 58 0 1 875 305 283 44 39 chr13 38100349 38100529 -82183783 + L1MEg LINE L1 1306 1486 -4598 1 875 332 306 26 43 chr13 38100592 38100859 -82183453 + L1M2 LINE L1 2758 3022 -3823 1 875 489 180 39 20 chr13 38100904 38101006 -82183306 + RSINE1 SINE B4 2 105 -60 1 875 252 0 0 0 chr13 38101014 38101042 -82183270 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 875 683 188 19 89 chr13 38101574 38101732 -82182580 - B1_Mus2 SINE Alu 0 147 1 1 875 21 0 0 0 chr13 38102756 38102777 -82181535 + AT_rich Low_complexity Low_complexity 1 21 0 1 875 567 0 0 0 chr13 38103005 38103068 -82181244 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 875 1209 55 0 0 chr13 38103456 38103602 -82180710 + B1_Mm SINE Alu 2 147 0 1 875 185 94 31 0 chr13 38103602 38103634 -82180678 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 1 875 359 240 94 19 chr13 38103765 38103871 -82180441 + PB1D10 SINE Alu 4 117 0 1 875 186 43 0 0 chr13 38104218 38104241 -82180071 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 1 875 725 217 38 19 chr13 38104817 38104977 -82179335 + RSINE1 SINE B4 3 165 0 1 875 21 57 0 0 chr13 38104983 38105018 -82179294 + AT_rich Low_complexity Low_complexity 1 35 0 1 875 1144 102 72 0 chr13 38105152 38105318 -82178994 + B2_Mm1t SINE B2 2 179 -14 1 875 284 75 567 0 chr13 38105346 38105437 -82178875 + B2_Mm2 SINE B2 47 188 -7 1 875 219 324 28 0 chr13 38105549 38105620 -82178692 - BC1_Mm scRNA scRNA -56 96 24 1 875 264 59 0 0 chr13 38105631 38105665 -82178647 + (ATG)n Simple_repeat Simple_repeat 2 35 0 1 875 432 310 23 0 chr13 38105665 38105794 -82178518 - B1F SINE Alu -9 140 9 1 875 304 333 62 11 chr13 38106093 38106272 -82178040 + L1MA5 LINE L1 5838 6025 -275 1 875 319 303 144 18 chr13 38106668 38106779 -82177533 + PB1D10 SINE Alu 3 127 0 1 875 798 235 1 43 chr13 38106780 38106981 -82177331 + B3A SINE B2 2 193 -23 1 875 258 263 0 26 chr13 38106991 38107069 -82177243 + ID SINE ID 8 83 -141 1 875 910 250 45 5 chr13 38107180 38107381 -82176931 - B3 SINE B2 -5 211 3 1 875 820 209 85 11 chr13 38107744 38107926 -82176386 + B3 SINE B2 2 197 -19 1 875 519 17 0 0 chr13 38107926 38107986 -82176326 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 875 581 226 12 18 chr13 38108019 38108164 -82176148 + PB1D9 SINE Alu 2 147 0 1 875 333 310 200 15 chr13 38108606 38108806 -82175506 + MER68 LTR ERVL 174 410 -153 1 875 1993 26 4 0 chr13 38110042 38110272 -82174040 + L1_Mus1 LINE L1 6278 6508 -59 1 875 243 267 139 0 chr13 38110358 38110444 -82173868 - MIRb SINE MIR -115 153 56 1 875 680 189 160 43 chr13 38110470 38110658 -82173654 - B3 SINE B2 -6 210 1 1 875 510 228 107 61 chr13 38111279 38111541 -82172771 - Charlie1b DNA MER1_type 0 523 250 1 875 2271 116 30 61 chr13 38111672 38112068 -82172244 + ORR1C2 LTR MaLR 1 384 0 1 875 336 226 129 12 chr13 38112240 38112325 -82171987 - PB1D10 SINE Alu -7 110 16 1 875 483 235 8 25 chr13 38112454 38112576 -82171736 + PB1D9 SINE Alu 1 120 0 2 875 1255 87 66 0 chr13 38112576 38112759 -82171553 + B2_Mm2 SINE B2 1 195 0 2 875 558 296 0 0 chr13 38112846 38112978 -82171334 - RSINE1 SINE B4 -32 133 2 2 875 405 293 26 0 chr13 38113033 38113149 -82171163 + PB1D7 SINE Alu 2 120 0 2 875 1180 68 0 0 chr13 38113569 38113715 -82170597 + B1_Mm SINE Alu 2 147 0 2 875 216 97 0 0 chr13 38113715 38113746 -82170566 + (A)n Simple_repeat Simple_repeat 1 31 0 2 875 671 196 68 40 chr13 38117844 38118036 -82166276 + B3 SINE B2 17 214 -2 2 875 443 312 19 13 chr13 38118121 38118280 -82166032 + B4A SINE B4 133 292 0 2 875 392 301 162 0 chr13 38118491 38118627 -82165685 - MER119 DNA MER1_type -252 331 174 2 875 798 229 113 45 chr13 38118806 38119071 -82165241 + B4 SINE B4 9 291 -1 2 875 279 339 43 9 chr13 38119344 38119460 -82164852 - L1M5 LINE L1 -583 5657 5538 2 875 450 273 27 0 chr13 38119505 38119615 -82164697 + MTE2a LTR MaLR 41 153 -226 2 875 472 96 118 9 chr13 38119626 38119732 -82164580 - ORR1B2 LTR MaLR -258 109 4 2 875 299 320 68 86 chr13 38120529 38120809 -82163503 - B4 SINE B4 -17 275 1 2 875 942 265 5 9 chr13 38121426 38121643 -82162669 - B3 SINE B2 0 216 1 2 875 631 161 9 0 chr13 38121649 38121761 -82162551 - PB1D9 SINE Alu -5 115 3 2 875 615 27 0 0 chr13 38121779 38121852 -82162460 + (TG)n Simple_repeat Simple_repeat 1 73 0 2 875 485 212 87 27 chr13 38121877 38122027 -82162285 - B3A SINE B2 -38 160 2 2 875 23 33 0 0 chr13 38122109 38122139 -82162173 + AT_rich Low_complexity Low_complexity 1 30 0 2 875 694 272 20 56 chr13 38122342 38122537 -82161775 + B3A SINE B2 1 188 -10 2 875 434 238 50 0 chr13 38122556 38122657 -82161655 - PB1D10 SINE Alu -10 107 2 2 875 277 339 35 9 chr13 38122879 38122992 -82161320 - RSINE1 SINE B4 -17 148 33 2 875 1472 58 16 11 chr13 38123012 38123203 -82161109 - B2_Mm2 SINE B2 -2 193 2 2 875 1201 77 88 0 chr13 38123340 38123510 -82160802 - B2_Mm2 SINE B2 -9 186 2 2 875 1359 91 16 0 chr13 38123892 38124078 -82160234 + B2_Mm1t SINE B2 1 189 -4 2 875 903 232 17 0 chr13 38124596 38124777 -82159535 + B3 SINE B2 1 184 -32 2 875 440 206 14 34 chr13 38125047 38125158 -82159154 - PB1D7 SINE Alu -1 119 8 2 875 1178 80 0 0 chr13 38125378 38125540 -82158772 - B2_Mm2 SINE B2 -32 163 2 2 875 923 225 186 23 chr13 38125808 38126162 -82158150 - MTD LTR MaLR -6 413 2 2 875 341 285 16 63 chr13 38126405 38126596 -82157716 - B3A SINE B2 -16 182 1 2 875 606 191 40 0 chr13 38126685 38126837 -82157475 - RCHARR1 DNA MER1_type -65 909 752 2 875 615 189 45 19 chr13 38126834 38126990 -82157322 - RCHARR1 DNA MER1_type -505 469 310 2 875 351 222 69 95 chr13 38127257 38127446 -82156866 + RLTR23 LTR ERV1 247 430 0 2 875 243 284 56 11 chr13 38127448 38127537 -82156775 - RCHARR1 DNA MER1_type -663 311 219 2 875 223 253 97 78 chr13 38128027 38128130 -82156182 - B3 SINE B2 -54 162 58 2 875 183 186 0 0 chr13 38128173 38128216 -82156096 + T-rich Low_complexity Low_complexity 1 43 0 2 875 704 92 160 0 chr13 38128220 38128339 -82155973 - B1_Mur4 SINE Alu -12 138 1 2 875 343 240 208 0 chr13 38128366 38128491 -82155821 + RSINE1 SINE B4 3 153 -12 2 875 230 250 50 0 chr13 38130578 38130638 -82153674 + MER20 DNA MER1_type 53 115 -104 2 875 504 224 34 20 chr13 38130898 38131044 -82153268 + B1_Mur2 SINE Alu 2 149 0 2 875 284 207 73 0 chr13 38131084 38131166 -82153146 + BC1_Mm scRNA scRNA 1 88 -64 2 875 225 292 50 138 chr13 38131166 38131180 -82153132 + ID SINE ID 1 76 -148 2 875 246 264 19 0 chr13 38131180 38131233 -82153079 + B1_Mus2 SINE Alu 2 55 -92 2 875 282 239 121 43 chr13 38131276 38131416 -82152896 + Charlie8 DNA MER1_type 27 177 -2251 2 875 265 162 12 75 chr13 38132179 38132259 -82152053 - B4A SINE B4 -2 290 216 2 875 265 274 39 93 chr13 38132249 38132378 -82151934 - B3 SINE B2 0 216 95 2 875 673 282 30 10 chr13 38132453 38132650 -82151662 - B4A SINE B4 -90 202 2 2 875 300 260 0 94 chr13 38132894 38132979 -82151333 + ID4 SINE ID 1 77 -6 2 875 327 240 40 30 chr13 38133020 38133119 -82151193 + B1F2 SINE Alu 1 100 -49 2 875 271 261 92 0 chr13 38133343 38133408 -82150904 - ID4 SINE ID -5 78 8 2 875 1080 197 10 0 chr13 38133434 38133637 -82150675 + B3 SINE B2 1 205 -11 2 875 577 222 102 8 chr13 38133790 38133917 -82150395 - B1_Mur4 SINE Alu -11 139 1 2 875 1229 91 17 11 chr13 38134106 38134284 -82150028 + B2_Mm2 SINE B2 1 179 -16 2 875 711 184 49 7 chr13 38134503 38134645 -82149667 - B3 SINE B2 -67 149 2 2 875 288 211 132 0 chr13 38136616 38136692 -82147620 + RSINE1 SINE B4 60 145 -20 2 875 1132 89 0 0 chr13 38136858 38137004 -82147308 + B1_Mus2 SINE Alu 2 147 0 2 875 21 0 0 0 chr13 38137004 38137025 -82147287 + AT_rich Low_complexity Low_complexity 1 21 0 2 875 1405 67 62 0 chr13 38137592 38137771 -82146541 - B2_Mm2 SINE B2 -1 194 5 2 875 297 224 83 138 chr13 38137903 38137919 -82146393 - MT2B LTR ERVL -314 287 211 2 875 539 203 17 8 chr13 38137919 38138038 -82146274 - B1_Mur1 SINE Alu -27 122 3 2 875 835 216 208 66 chr13 38138311 38138496 -82145816 + MTD LTR MaLR 12 210 -209 2 875 1320 102 38 0 chr13 38138496 38138682 -82145630 + B2_Mm2 SINE B2 2 194 -1 2 875 835 216 208 66 chr13 38138682 38138843 -82145469 + MTD LTR MaLR 211 407 -12 2 875 340 261 82 30 chr13 38138878 38139012 -82145300 - RSINE1 SINE B4 -15 150 10 2 875 189 0 0 0 chr13 38139083 38139104 -82145208 + (T)n Simple_repeat Simple_repeat 1 21 0 2 875 709 193 56 14 chr13 38139317 38139459 -82144853 + B1_Mur1 SINE Alu 1 148 -1 2 875 695 156 49 0 chr13 38139462 38139584 -82144728 + B1_Mur3 SINE Alu 1 128 -21 2 875 618 129 58 62 chr13 38139849 38139986 -82144326 - B1_Mus1 SINE Alu 0 148 17 2 875 562 240 239 39 chr13 38140021 38140331 -82143981 - ORR1E LTR MaLR -7 372 1 2 875 1028 99 14 0 chr13 38141293 38141434 -82142878 + B1_Mur4 SINE Alu 1 143 -7 2 876 183 184 0 0 chr13 38142252 38142290 -82142022 + T-rich Low_complexity Low_complexity 1 38 0 2 876 1063 44 81 0 chr13 38142290 38142426 -82141886 - B1_Mm SINE Alu 0 147 1 2 876 314 325 35 0 chr13 38143191 38143305 -82141007 + PB1D7 SINE Alu 1 118 -2 2 876 343 102 190 24 chr13 38143323 38143433 -82140879 - B2_Mm2 SINE B2 0 193 50 2 876 1148 141 6 22 chr13 38143462 38143643 -82140669 - B2_Mm1t SINE B2 -14 179 2 2 876 636 223 6 144 chr13 38143647 38143765 -82140547 - B1_Mur3 SINE Alu 0 149 39 2 876 1219 48 7 0 chr13 38143765 38143911 -82140401 - B1_Mus2 SINE Alu 0 147 1 2 876 636 223 6 144 chr13 38143911 38143965 -82140347 - B1_Mur3 SINE Alu -111 38 1 2 876 436 189 32 43 chr13 38143965 38144059 -82140253 - 4.5SRNA scRNA scRNA -1 93 1 2 876 1257 127 102 0 chr13 38144299 38144504 -82139808 + URR1A DNA MER1_type 1 226 0 2 876 242 259 219 12 chr13 38145136 38145300 -82139012 - L1MB3 LINE L1 -74 6109 5912 2 876 316 239 159 103 chr13 38145312 38145457 -82138855 - B3A SINE B2 -10 188 36 2 876 342 83 336 9 chr13 38145827 38145934 -82138378 - B2_Mm2 SINE B2 -7 188 47 2 876 1289 103 11 0 chr13 38146018 38146193 -82138119 - B2_Mm1t SINE B2 -14 179 3 2 876 521 275 86 29 chr13 38146211 38146421 -82137891 - ID_B1 SINE B4 0 224 3 2 876 249 309 55 0 chr13 38146443 38146553 -82137759 - PB1D10 SINE Alu 0 117 2 2 876 1379 176 87 44 chr13 38146634 38146978 -82137334 - ORR1B2 LTR MaLR -8 359 1 2 876 659 254 75 37 chr13 38147086 38147274 -82137038 - B3A SINE B2 -2 196 2 2 876 1135 45 0 0 chr13 38147544 38147676 -82136636 + B1_Mm SINE Alu 1 132 -15 2 876 273 312 184 0 chr13 38148173 38148282 -82136030 - B1F SINE Alu -20 129 1 2 876 29 0 0 0 chr13 38148584 38148613 -82135699 + AT_rich Low_complexity Low_complexity 1 29 0 2 876 591 236 55 79 chr13 38149390 38149592 -82134720 - B3A SINE B2 -1 197 1 2 876 307 283 63 44 chr13 38149753 38149912 -82134400 - RSINE1 SINE B4 0 165 4 2 876 390 259 107 41 chr13 38149944 38150113 -82134199 - B3A SINE B2 -18 180 1 2 876 234 266 78 52 chr13 38150153 38150268 -82134044 - MER58D DNA MER1_type -191 195 78 2 876 212 200 42 14 chr13 38150437 38150478 -82133834 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 876 201 74 0 0 chr13 38150478 38150505 -82133807 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 876 212 200 42 14 chr13 38150505 38150534 -82133778 + (TA)n Simple_repeat Simple_repeat 2 32 0 2 876 441 246 42 42 chr13 38150670 38150789 -82133523 - RSINE1 SINE B4 -2 163 45 2 876 390 203 0 0 chr13 38151030 38151104 -82133208 + B3A SINE B2 2 75 -123 2 876 270 292 0 0 chr13 38151112 38151177 -82133135 + PB1D10 SINE Alu 47 111 -6 2 876 265 196 0 51 chr13 38151124 38151183 -82133129 + ID_B1 SINE B4 169 224 0 2 876 663 81 0 0 chr13 38151321 38151420 -82132892 + (CTA)n Simple_repeat Simple_repeat 3 101 0 2 876 271 178 0 0 chr13 38151565 38151610 -82132702 - RMER30 DNA MER1_type -151 51 7 2 876 269 264 31 52 chr13 38152311 38152407 -82131905 + PB1 SINE Alu 22 115 -12 3 876 24 0 0 0 chr13 38152925 38152949 -82131363 + AT_rich Low_complexity Low_complexity 1 24 0 3 876 315 270 151 0 chr13 38153688 38153847 -82130465 - L2 LINE L2 -572 2847 2665 3 876 227 299 135 43 chr13 38154401 38154529 -82129783 + ORR1E LTR MaLR 2 137 -222 3 876 645 73 28 0 chr13 38154529 38154638 -82129674 + (TG)n Simple_repeat Simple_repeat 2 113 0 3 876 227 299 135 43 chr13 38154638 38154694 -82129618 + ORR1E LTR MaLR 138 203 -156 3 876 800 157 36 0 chr13 38155012 38155152 -82129160 + B1_Mur1 SINE Alu 3 147 -2 3 876 233 145 236 57 chr13 38155299 38155427 -82128885 + L2a LINE L2 3237 3410 -16 3 876 338 273 0 102 chr13 38155853 38155951 -82128361 - ID_B1 SINE B4 -21 203 116 3 876 216 0 0 0 chr13 38156141 38156165 -82128147 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 3 876 246 319 63 49 chr13 38156185 38156327 -82127985 - RMER4A LTR ERVK -304 162 19 3 876 214 305 85 0 chr13 38156400 38156482 -82127830 - ID_B1 SINE B4 -134 90 2 3 876 575 132 56 9 chr13 38156606 38156713 -82127599 - Lx LINE L1 -5 6649 6538 3 876 260 245 20 0 chr13 38157158 38157220 -82127092 + PB1D9 SINE Alu 1 64 -63 3 876 385 214 33 33 chr13 38157512 38157604 -82126708 + RSINE1 SINE B4 43 134 -31 3 876 1178 164 106 30 chr13 38157745 38158009 -82126303 - Lx4B LINE L1 0 7058 6775 3 876 657 192 68 0 chr13 38158013 38158159 -82126153 + B3 SINE B2 58 213 -3 3 876 400 258 36 36 chr13 38158510 38158647 -82125665 + B4A SINE B4 1 137 -155 3 876 1266 189 55 38 chr13 38158648 38158939 -82125373 + MTD LTR MaLR 4 299 -120 3 876 1714 211 89 30 chr13 38158990 38159498 -82124814 + MTD-int LTR MaLR 719 1256 -2 3 876 1592 199 70 13 chr13 38159500 38159888 -82124424 + MTD LTR MaLR 1 410 -9 3 876 462 271 34 20 chr13 38159897 38160044 -82124268 + B4A SINE B4 133 281 -11 3 876 2466 129 181 0 chr13 38160116 38160598 -82123714 - RMER4B LTR ERVK 0 585 17 3 876 311 312 96 42 chr13 38160924 38161091 -82123221 - B4A SINE B4 -108 184 9 3 876 355 365 0 0 chr13 38161120 38161224 -82123088 - PB1 SINE Alu -11 116 13 3 876 593 221 24 0 chr13 38161286 38161413 -82122899 + B1_Mur2 SINE Alu 13 142 -7 3 876 1126 89 118 12 chr13 38161497 38161667 -82122645 - B2_Mm2 SINE B2 -7 188 1 3 876 2068 186 23 8 chr13 38162084 38162475 -82121837 + MTC LTR MaLR 17 413 -8 3 876 463 172 80 10 chr13 38162700 38162800 -82121512 - PB1D10 SINE Alu -9 108 2 3 876 275 0 0 28 chr13 38163272 38163308 -82121004 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 876 697 118 158 0 chr13 38163502 38163629 -82120683 - B1_Mur4 SINE Alu 0 150 4 3 876 692 289 56 8 chr13 38163663 38163914 -82120398 - MER2 DNA MER2_type -2 343 81 3 876 366 214 0 23 chr13 38164043 38164129 -82120183 - MER2B DNA MER2_type -187 149 66 3 876 481 191 11 0 chr13 38164135 38164224 -82120088 - RSINE1 SINE B4 -74 91 2 3 876 628 217 179 22 chr13 38164664 38164843 -82119469 + B3 SINE B2 5 211 -5 3 876 394 202 13 0 chr13 38164862 38164941 -82119371 + RSINE1 SINE B4 12 91 -74 3 876 21 36 0 0 chr13 38164982 38165010 -82119302 + AT_rich Low_complexity Low_complexity 1 28 0 3 876 1147 72 18 0 chr13 38165022 38165188 -82119124 + B2_Mm2 SINE B2 21 189 -6 3 876 1233 21 0 14 chr13 38165438 38165586 -82118726 + B1_Mus2 SINE Alu 2 147 0 3 876 249 33 0 0 chr13 38165586 38165616 -82118696 + (A)n Simple_repeat Simple_repeat 1 30 0 3 876 309 333 21 35 chr13 38166567 38166710 -82117602 + B1F1 SINE Alu 6 146 -3 3 876 213 224 0 0 chr13 38166719 38166768 -82117544 + ID4_ SINE ID 3 51 -32 3 876 322 275 56 10 chr13 38167423 38167531 -82116781 - PB1D7 SINE Alu -34 115 1 3 876 846 153 0 46 chr13 38167603 38167754 -82116558 - ID_B1 SINE B4 0 224 81 3 876 342 117 321 18 chr13 38167840 38167952 -82116360 - B2_Mm2 SINE B2 -3 192 47 3 876 990 70 8 0 chr13 38168018 38168146 -82116166 - B2_Mm1t SINE B2 -14 179 51 3 876 227 152 22 0 chr13 38168148 38168194 -82116118 + CT-rich Low_complexity Low_complexity 2 48 0 3 876 32 0 0 0 chr13 38168242 38168274 -82116038 + AT_rich Low_complexity Low_complexity 1 32 0 3 876 971 229 29 0 chr13 38168274 38168484 -82115828 - B3 SINE B2 0 216 1 3 876 288 0 0 0 chr13 38169599 38169631 -82114681 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 3 876 328 200 57 0 chr13 38169739 38169809 -82114503 + ID4_ SINE ID 1 74 -9 3 876 26 30 0 0 chr13 38170245 38170278 -82114034 + AT_rich Low_complexity Low_complexity 1 33 0 3 876 369 0 0 0 chr13 38170465 38170506 -82113806 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 876 282 242 21 75 chr13 38171265 38171363 -82112949 + ID4 SINE ID 1 102 -50 3 876 964 106 99 65 chr13 38171403 38171690 -82112622 + RMER10B LTR ERVL 19 398 0 3 876 215 250 0 16 chr13 38171693 38171754 -82112558 + GA-rich Low_complexity Low_complexity 4 63 0 3 876 358 247 40 20 chr13 38171777 38171876 -82112436 + B1F1 SINE Alu 15 115 -34 3 876 185 231 37 37 chr13 38172671 38172725 -82111587 - MIRm SINE MIR 0 276 223 3 876 546 212 25 58 chr13 38173585 38173747 -82110565 + PB1D7 SINE Alu 1 150 0 3 876 683 246 28 0 chr13 38173773 38173915 -82110397 + B1_Mur1 SINE Alu 4 149 0 3 876 198 103 0 0 chr13 38173916 38173945 -82110367 + (A)n Simple_repeat Simple_repeat 1 29 0 3 876 367 352 0 22 chr13 38174171 38174297 -82110015 + (TG)n Simple_repeat Simple_repeat 1 123 0 3 876 801 124 0 0 chr13 38174297 38174426 -82109886 + (TA)n Simple_repeat Simple_repeat 2 130 0 3 876 367 352 0 22 chr13 38174426 38174482 -82109830 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 876 279 273 115 15 chr13 38175278 38175408 -82108904 - B1F1 SINE Alu -6 143 1 3 876 474 258 153 22 chr13 38175498 38175720 -82108592 + L1MB7 LINE L1 5905 6155 -29 3 876 1347 79 17 6 chr13 38175734 38175912 -82108400 - B2_Mm2 SINE B2 -14 181 2 3 876 522 0 0 0 chr13 38176358 38176416 -82107896 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 876 287 270 32 43 chr13 38176416 38176509 -82107803 - MER67B LTR ERV1 -387 274 183 3 876 1312 82 16 5 chr13 38176766 38176936 -82107376 + B2_Mm1a SINE B2 6 178 -15 3 876 1296 14 0 7 chr13 38176936 38177084 -82107228 + B1_Mus2 SINE Alu 1 147 0 3 876 1312 82 16 5 chr13 38177084 38177098 -82107214 + B2_Mm1a SINE B2 179 192 -1 3 876 183 80 0 0 chr13 38177236 38177261 -82107051 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 876 813 223 79 17 chr13 38177296 38177474 -82106838 + ID_B1 SINE B4 3 191 -33 3 876 295 284 44 35 chr13 38177588 38177701 -82106611 + ID_B1 SINE B4 22 135 -89 3 876 332 260 19 11 chr13 38177814 38177944 -82106368 + L1MB4 LINE L1 6032 6177 -3 3 876 1123 200 5 14 chr13 38177968 38178186 -82106126 - B3 SINE B2 0 216 1 3 876 279 0 0 0 chr13 38178196 38178227 -82106085 + (A)n Simple_repeat Simple_repeat 1 31 0 3 876 267 82 197 40 chr13 38178227 38178303 -82106009 + L1MB3 LINE L1 5814 5901 -282 3 876 369 233 0 55 chr13 38178392 38178483 -82105829 + PB1D10 SINE Alu 32 117 0 3 876 224 218 0 18 chr13 38178484 38178540 -82105772 + GA-rich Low_complexity Low_complexity 4 58 0 3 876 371 195 23 0 chr13 38178994 38179081 -82105231 + GA-rich Low_complexity Low_complexity 3 91 0 3 876 296 179 35 82 chr13 38179637 38179722 -82104590 + L1MA7 LINE L1 6070 6150 -141 3 876 265 256 0 37 chr13 38179764 38179845 -82104467 + GA-rich Low_complexity Low_complexity 3 80 0 3 876 1939 207 39 10 chr13 38179852 38180242 -82104070 - MTD LTR MaLR -8 411 11 3 876 846 168 7 0 chr13 38180451 38180588 -82103724 + B1_Mus2 SINE Alu 10 147 0 3 876 522 103 0 0 chr13 38180620 38180698 -82103614 + (CA)n Simple_repeat Simple_repeat 2 79 0 3 876 21 36 0 0 chr13 38180740 38180768 -82103544 + AT_rich Low_complexity Low_complexity 1 28 0 3 876 896 226 15 35 chr13 38180770 38180972 -82103340 - B3A SINE B2 0 198 1 3 876 544 239 28 0 chr13 38181648 38181757 -82102555 - B1F SINE Alu -36 113 2 3 876 22 0 0 0 chr13 38182082 38182104 -82102208 + AT_rich Low_complexity Low_complexity 1 22 0 3 876 544 209 130 0 chr13 38182595 38182710 -82101602 - B1F1 SINE Alu -5 144 15 3 876 225 94 0 0 chr13 38183144 38183176 -82101136 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 876 615 62 0 0 chr13 38183906 38183986 -82100326 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 876 730 258 210 17 chr13 38184508 38184741 -82099571 + B4A SINE B4 15 292 0 3 876 232 270 21 53 chr13 38184873 38184894 -82099418 - MLT1A0 LTR MaLR -215 150 130 3 876 996 183 176 68 chr13 38184894 38185264 -82099048 + RMER17C LTR ERVK 1 410 0 3 876 232 270 21 53 chr13 38185264 38185336 -82098976 - MLT1A0 LTR MaLR -236 129 60 3 876 198 0 0 0 chr13 38185345 38185367 -82098945 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 876 760 130 120 15 chr13 38185381 38185514 -82098798 - B1_Mus1 SINE Alu 0 148 2 3 876 446 248 63 88 chr13 38185514 38185545 -82098767 - B4A SINE B4 -200 92 66 3 876 312 305 74 47 chr13 38185590 38185738 -82098574 + B4A SINE B4 1 152 -140 3 876 390 74 0 0 chr13 38185828 38185882 -82098430 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 876 30 27 0 0 chr13 38186335 38186372 -82097940 + AT_rich Low_complexity Low_complexity 1 37 0 3 876 659 233 42 69 chr13 38186445 38186634 -82097678 - RLTR23 LTR ERV1 0 430 247 3 876 349 268 173 0 chr13 38186894 38187021 -82097291 - B3A SINE B2 -48 150 2 3 876 894 180 0 0 chr13 38187325 38187464 -82096848 - B1_Mur1 SINE Alu -7 142 4 4 876 610 244 8 8 chr13 38187744 38187868 -82096444 - B1F1 SINE Alu -15 134 11 4 876 249 284 24 36 chr13 38188531 38188615 -82095697 + B4A SINE B4 70 152 -140 4 876 364 304 19 10 chr13 38188549 38188652 -82095660 + PB1D7 SINE Alu 5 108 -12 4 876 495 0 0 0 chr13 38188652 38188707 -82095605 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 4 876 324 302 68 34 chr13 38189022 38189228 -82095084 - L1M4 LINE L1 -1333 4813 4601 4 876 771 147 42 49 chr13 38189233 38189376 -82094936 + B1_Mus2 SINE Alu 6 147 0 4 876 452 288 230 18 chr13 38189403 38189629 -82094683 + B4A SINE B4 3 276 -16 4 876 936 202 0 121 chr13 38189731 38189962 -82094350 + MTD LTR MaLR 39 241 -178 4 876 551 136 0 0 chr13 38189962 38190043 -82094269 + MTC LTR MaLR 1 81 -340 4 876 386 176 0 0 chr13 38190044 38190112 -82094200 + B3 SINE B2 3 70 -146 4 876 483 130 0 0 chr13 38190114 38190191 -82094121 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 876 311 217 43 0 chr13 38190200 38190269 -82094043 + B3 SINE B2 137 208 -8 4 876 180 0 0 0 chr13 38190270 38190290 -82094022 + (GA)n Simple_repeat Simple_repeat 1 20 0 4 876 1904 140 16 13 chr13 38190291 38190595 -82093717 + MTC LTR MaLR 80 384 -37 4 876 867 296 65 26 chr13 38190835 38191175 -82093137 + ORR1E LTR MaLR 5 357 -2 4 876 725 203 97 43 chr13 38191302 38191487 -82092825 - B2_Mm2 SINE B2 0 195 1 4 876 297 0 0 0 chr13 38191507 38191540 -82092772 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 876 475 301 0 58 chr13 38191544 38191664 -82092648 - B3A SINE B2 -38 160 48 4 876 1291 79 0 59 chr13 38192041 38192071 -82092241 - B2_Mm2 SINE B2 -5 190 167 4 876 270 81 0 0 chr13 38192071 38192108 -82092204 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 876 441 0 0 0 chr13 38192108 38192156 -82092156 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 876 3324 48 2 2 chr13 38192157 38192553 -82091759 - MTA_Mm LTR MaLR 0 396 1 4 876 1291 79 0 59 chr13 38192553 38192721 -82091591 - B2_Mm2 SINE B2 -29 166 2 4 876 341 231 39 0 chr13 38192764 38192842 -82091470 - ID4_ SINE ID -1 82 2 4 876 582 330 30 21 chr13 38192842 38193169 -82091143 - L1M4 LINE L1 -1777 4369 4039 4 876 569 273 13 111 chr13 38193219 38193454 -82090858 - B3 SINE B2 0 216 5 4 876 268 300 18 99 chr13 38193476 38193587 -82090725 - PB1 SINE Alu -25 102 1 4 876 594 268 22 7 chr13 38193610 38193749 -82090563 - ID_B1 SINE B4 -1 223 83 4 876 233 316 0 0 chr13 38193913 38193970 -82090342 - RMER15 LTR ERVL -108 467 411 4 876 556 230 43 43 chr13 38193985 38194126 -82090186 - Lx8 LINE L1 -947 6526 6386 4 876 1772 169 82 35 chr13 38194136 38194479 -82089833 - ORR1B2 LTR MaLR -8 359 1 4 876 813 255 49 0 chr13 38194481 38194665 -82089647 - Lx8 LINE L1 -1093 6380 6188 4 876 357 228 181 21 chr13 38194894 38195044 -82089268 + MLT1H LTR MaLR 405 573 -6 4 876 382 225 11 38 chr13 38195071 38195256 -82089056 + C-rich Low_complexity Low_complexity 1 180 0 4 876 208 273 11 11 chr13 38195256 38195345 -82088967 + CT-rich Low_complexity Low_complexity 3 91 0 4 876 311 45 0 22 chr13 38196207 38196253 -82088059 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 876 467 137 0 52 chr13 38196254 38196331 -82087981 - B1_Mur2 SINE Alu -15 134 62 4 876 1269 215 90 17 chr13 38196330 38196619 -82087693 - ORR1D1 LTR MaLR -49 325 16 4 876 255 360 0 0 chr13 38196623 38196709 -82087603 + (CATATA)n Simple_repeat Simple_repeat 1 86 0 4 876 224 305 0 0 chr13 38197679 38197738 -82086574 - RSINE1 SINE B4 -28 137 79 4 876 411 287 15 82 chr13 38197758 38197958 -82086354 - RSINE1 SINE B4 -113 179 2 4 876 881 200 132 18 chr13 38197943 38197964 -82086348 - B4A SINE B4 -47 245 225 4 876 195 69 0 0 chr13 38197964 38197993 -82086319 + (TTA)n Simple_repeat Simple_repeat 2 30 0 4 876 881 200 132 18 chr13 38197993 38198190 -82086122 - B4A SINE B4 -68 224 4 4 876 186 167 0 0 chr13 38198757 38198793 -82085519 + (CACGT)n Simple_repeat Simple_repeat 4 39 0 4 876 298 143 39 103 chr13 38198998 38199076 -82085236 - B1_Mus1 SINE Alu -72 76 4 4 876 660 277 142 60 chr13 38199087 38199601 -82084711 - L1M4 LINE L1 -830 5316 4761 4 876 745 286 14 33 chr13 38199614 38199827 -82084485 - B3 SINE B2 -4 212 4 4 876 191 61 30 0 chr13 38199896 38199929 -82084383 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 876 743 203 31 19 chr13 38200245 38200406 -82083906 - RSINE1 SINE B4 0 165 3 4 876 265 289 12 73 chr13 38201419 38201501 -82082811 - ID2 SINE ID -5 78 2 4 876 3078 14 0 82 chr13 38201511 38201911 -82082401 + IAPLTR1_Mm LTR ERVK 1 367 0 4 876 8654 58 75 74 chr13 38201911 38203216 -82081096 + IAPEz-int LTR ERVK 8 1313 -5168 4 876 29510 19 1 2 chr13 38203215 38206490 -82077822 + IAPEz-int LTR ERVK 3210 6481 0 4 876 3078 14 0 82 chr13 38206490 38206890 -82077422 + IAPLTR1_Mm LTR ERVK 1 367 0 4 876 964 224 66 15 chr13 38207014 38207273 -82077039 + MLT1B LTR MaLR 1 272 -118 4 876 245 289 0 135 chr13 38207443 38207539 -82076773 - ID4_ SINE ID 0 83 1 4 876 429 325 388 19 chr13 38207707 38207916 -82076396 - B4A SINE B4 0 292 7 4 876 307 317 39 70 chr13 38208364 38208493 -82075819 - B4A SINE B4 -120 172 48 4 876 813 295 21 1 chr13 38208738 38208959 -82075353 - ID_B1 SINE B4 -44 248 6 4 876 296 226 51 51 chr13 38209164 38209262 -82075050 + MER2 DNA MER2_type 100 197 -148 4 876 896 257 132 52 chr13 38209391 38209777 -82074535 + MTD-int LTR MaLR 835 1251 -7 4 876 1545 212 137 13 chr13 38209778 38210150 -82074162 + MTD LTR MaLR 2 419 0 4 876 212 250 0 0 chr13 38210268 38210312 -82074000 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 876 224 287 106 0 chr13 38210866 38210960 -82073352 - L2 LINE L2 -828 2591 2488 4 876 233 250 14 42 chr13 38211177 38211248 -82073064 - MTE2a LTR MaLR -31 348 280 4 876 956 162 202 0 chr13 38212029 38212202 -82072110 - B3 SINE B2 -6 210 3 4 876 259 350 0 72 chr13 38212240 38212351 -82071961 + Tigger5 DNA MER2_type 1 103 -2303 4 876 300 321 55 9 chr13 38212455 38212565 -82071747 + Tigger5 DNA MER2_type 2292 2406 0 4 876 349 235 255 0 chr13 38212649 38212751 -82071561 - B1F1 SINE Alu -21 128 1 4 876 728 226 30 6 chr13 38213575 38213709 -82070603 + B3A SINE B2 2 136 -62 4 876 474 18 0 0 chr13 38213709 38213764 -82070548 + (CAGG)n Simple_repeat Simple_repeat 3 57 0 4 876 728 249 44 15 chr13 38213764 38213833 -82070479 + B3A SINE B2 135 211 -5 4 876 1468 69 16 0 chr13 38213868 38214057 -82070255 + B2_Mm1a SINE B2 1 192 -1 4 876 22 0 0 0 chr13 38214119 38214141 -82070171 + AT_rich Low_complexity Low_complexity 1 22 0 4 876 391 327 64 19 chr13 38214575 38214731 -82069581 - RSINE1 SINE B4 0 165 3 4 876 721 222 145 5 chr13 38215129 38215315 -82068997 - ID_B1 SINE B4 0 224 13 4 876 264 59 0 0 chr13 38215717 38215751 -82068561 + (GGA)n Simple_repeat Simple_repeat 1 34 0 4 876 658 276 12 56 chr13 38216235 38216484 -82067828 + L1MB3 LINE L1 5435 5672 -499 4 876 387 0 0 0 chr13 38216484 38216527 -82067785 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 876 450 0 0 0 chr13 38216527 38216577 -82067735 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 876 460 184 19 10 chr13 38216580 38216684 -82067628 - L1MB3 LINE L1 -291 5892 5788 4 876 378 0 0 0 chr13 38216696 38216738 -82067574 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 876 218 319 28 28 chr13 38216741 38216812 -82067500 - RSINE1 SINE B4 -3 162 92 4 876 396 315 41 83 chr13 38216813 38217031 -82067281 - B4A SINE B4 -81 211 3 4 876 1828 243 45 25 chr13 38217034 38217545 -82066767 + L1MB3 LINE L1 5663 6183 0 4 876 367 261 11 0 chr13 38217985 38218077 -82066235 - BC1_Mm scRNA scRNA -58 94 2 4 876 184 216 0 51 chr13 38218411 38218450 -82065862 - L3 LINE CR1 -1433 3056 3020 4 876 350 288 183 11 chr13 38218550 38218736 -82065576 + MER20 DNA MER1_type 1 218 -1 4 876 633 172 8 33 chr13 38218986 38219106 -82065206 - PB1D7 SINE Alu -1 119 3 4 876 335 246 215 25 chr13 38219206 38219327 -82064985 + B1F SINE Alu 6 149 0 4 876 275 345 97 0 chr13 38219726 38219839 -82064473 + MIRc SINE MIR 83 206 -62 4 876 334 225 200 29 chr13 38220483 38220588 -82063724 + PB1 SINE Alu 3 125 -2 4 876 252 231 0 0 chr13 38220630 38220682 -82063630 + ID4_ SINE ID 14 65 -18 4 876 289 226 0 87 chr13 38220856 38220948 -82063364 - MTEa LTR MaLR -53 326 243 4 876 226 262 0 0 chr13 38220973 38221015 -82063297 - MTEa LTR MaLR -126 253 212 4 876 933 130 253 6 chr13 38221214 38221384 -82062928 + B3 SINE B2 3 214 -2 4 876 26 0 0 0 chr13 38221386 38221412 -82062900 + AT_rich Low_complexity Low_complexity 1 26 0 4 876 345 260 100 40 chr13 38221462 38221562 -82062750 - PB1D10 SINE Alu -7 110 5 4 876 1152 75 0 0 chr13 38221841 38221988 -82062324 + B1_Mm SINE Alu 1 147 0 4 876 680 244 15 8 chr13 38222009 38222141 -82062171 + RSINE1 SINE B4 3 135 -30 4 876 353 367 20 7 chr13 38222255 38222403 -82061909 + MER5B DNA MER1_type 26 175 -3 4 876 278 312 26 43 chr13 38222497 38222614 -82061698 + MER5B DNA MER1_type 61 175 -3 4 876 335 330 21 0 chr13 38223120 38223217 -82061095 + B4 SINE B4 1 99 -193 4 876 450 0 0 0 chr13 38223929 38223979 -82060333 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 876 1052 268 7 80 chr13 38223979 38224267 -82060045 - B4 SINE B4 -23 269 3 4 876 310 356 118 45 chr13 38224744 38225032 -82059280 - ORR1E LTR MaLR 0 359 51 4 876 266 227 65 43 chr13 38225581 38225673 -82058639 - L1ME3A LINE L1 -112 6061 5968 4 876 311 113 0 19 chr13 38226541 38226595 -82057717 + (TCC)n Simple_repeat Simple_repeat 1 53 0 4 876 294 296 28 0 chr13 38226595 38226666 -82057646 - PB1D10 SINE Alu -2 115 43 4 876 322 69 0 33 chr13 38226686 38226746 -82057566 + (CAAAA)n Simple_repeat Simple_repeat 1 58 0 4 876 211 202 125 0 chr13 38226794 38226855 -82057457 + B1_Mur1 SINE Alu 48 149 0 4 876 206 234 21 0 chr13 38226923 38226970 -82057342 + CT-rich Low_complexity Low_complexity 1 48 0 4 876 261 308 26 0 chr13 38226971 38227049 -82057263 - ID4_ SINE ID -2 81 2 4 876 311 312 0 0 chr13 38227350 38227427 -82056885 - ID4 SINE ID -6 77 1 5 876 728 182 182 0 chr13 38227450 38227631 -82056681 + B3 SINE B2 3 216 0 5 876 243 0 0 0 chr13 38227792 38227819 -82056493 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 876 770 220 0 26 chr13 38227989 38228143 -82056169 - B3 SINE B2 -40 176 27 5 876 606 93 0 0 chr13 38228221 38228307 -82056005 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 5 876 222 37 0 0 chr13 38228315 38228342 -82055970 + (TGG)n Simple_repeat Simple_repeat 1 27 0 5 876 371 98 16 0 chr13 38228342 38228403 -82055909 + (TATG)n Simple_repeat Simple_repeat 1 62 0 5 876 545 279 31 117 chr13 38228423 38228740 -82055572 - B4A SINE B4 -2 290 1 5 876 263 250 54 81 chr13 38229056 38229130 -82055182 - tRNA-Ala-GCA tRNA tRNA -3 72 1 5 876 458 170 22 33 chr13 38229428 38229610 -82054702 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 876 773 248 6 43 chr13 38229637 38229801 -82054511 - RSINE1 SINE B4 -2 163 6 5 876 288 154 0 0 chr13 38230889 38230941 -82053371 + (TTCA)n Simple_repeat Simple_repeat 3 54 0 5 876 540 0 0 0 chr13 38231754 38231814 -82052498 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 876 483 204 0 11 chr13 38232140 38232229 -82052083 - MTC LTR MaLR -333 88 1 5 876 852 219 22 38 chr13 38232282 38232467 -82051845 - RLTR25B LTR ERVK -846 182 1 5 876 243 241 161 36 chr13 38232474 38232586 -82051726 - ORR1E LTR MaLR -212 147 22 5 876 1930 197 117 51 chr13 38232842 38233328 -82050984 - RLTR20D LTR ERVK 0 568 51 5 876 1818 197 113 3 chr13 38233759 38234131 -82050181 - MTD LTR MaLR -2 417 5 5 876 382 210 25 0 chr13 38234608 38234689 -82049623 + ID4 SINE ID 1 83 0 5 876 410 0 20 0 chr13 38234689 38234739 -82049573 + (CAAAAA)n Simple_repeat Simple_repeat 2 52 0 5 876 774 0 0 0 chr13 38234826 38234912 -82049400 + (TTC)n Simple_repeat Simple_repeat 2 87 0 5 876 699 137 164 31 chr13 38234912 38235029 -82049283 - B1_Mur4 SINE Alu -11 139 5 5 876 260 364 27 27 chr13 38235040 38235300 -82049012 + HAL1 LINE L1 1504 1763 -744 5 876 1125 259 87 3 chr13 38235607 38235932 -82048380 + L1MB3 LINE L1 5684 6038 -145 5 876 237 222 17 100 chr13 38236096 38236156 -82048156 + RSINE1 SINE B4 111 165 0 5 876 282 194 0 0 chr13 38236156 38236228 -82048084 + (CA)n Simple_repeat Simple_repeat 1 72 0 5 876 2577 43 9 9 chr13 38236332 38236659 -82047653 + L1_Mus3 LINE L1 6310 6636 -2 5 876 396 326 136 70 chr13 38238419 38238676 -82045636 + B4 SINE B4 1 274 -18 5 876 324 0 0 0 chr13 38238681 38238717 -82045595 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 876 459 0 0 0 chr13 38238717 38238767 -82045545 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 876 250 344 0 0 chr13 38238793 38238854 -82045458 - MER2 DNA MER2_type -23 322 262 5 876 537 16 0 0 chr13 38239896 38239958 -82044354 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 876 239 239 0 0 chr13 38240503 38240549 -82043763 + B1_Mus1 SINE Alu 1 46 -102 5 876 609 88 57 38 chr13 38240595 38240701 -82043611 + B1_Mus2 SINE Alu 40 147 0 5 876 275 189 0 36 chr13 38242667 38242722 -82041590 - PB1D10 SINE Alu 0 117 65 5 876 249 98 0 0 chr13 38243554 38243595 -82040717 + (CGG)n Simple_repeat Simple_repeat 3 43 0 5 876 373 262 0 0 chr13 38245298 38245378 -82038934 - ID4 SINE ID -2 81 2 5 876 21 0 0 0 chr13 38245663 38245684 -82038628 + GC_rich Low_complexity Low_complexity 1 21 0 5 876 259 85 0 41 chr13 38246837 38246886 -82037426 + (TAA)n Simple_repeat Simple_repeat 2 48 0 5 876 258 138 0 0 chr13 38248060 38248118 -82036194 + (A)n Simple_repeat Simple_repeat 1 58 0 5 876 201 202 43 0 chr13 38248129 38248185 -82036127 - MIRc SINE MIR -163 105 44 5 876 738 157 43 50 chr13 38249940 38250081 -82034231 - B1_Mur3 SINE Alu -1 148 9 5 876 461 282 40 137 chr13 38249944 38250170 -82034142 - B4 SINE B4 -69 223 20 5 876 195 100 0 0 chr13 38250514 38250544 -82033768 + (T)n Simple_repeat Simple_repeat 1 30 0 5 876 216 0 0 0 chr13 38250713 38250737 -82033575 + (T)n Simple_repeat Simple_repeat 1 24 0 5 876 273 57 0 0 chr13 38251077 38251112 -82033200 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 5 876 189 0 0 0 chr13 38251149 38251170 -82033142 + (GCTG)n Simple_repeat Simple_repeat 1 21 0 5 876 564 275 73 6 chr13 38251609 38251683 -82032629 + ID SINE ID 2 87 -137 5 876 212 322 65 48 chr13 38251683 38251807 -82032505 + B1_Mm SINE Alu 1 126 -21 5 876 303 49 0 0 chr13 38251829 38251870 -82032442 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 5 876 450 312 103 23 chr13 38251911 38252110 -82032202 + L1MC4 LINE L1 950 1168 -5047 5 876 1146 50 0 48 chr13 38252110 38252299 -82032013 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 876 450 312 103 23 chr13 38252299 38252361 -82031951 + L1MC4 LINE L1 1169 1231 -4984 5 876 489 155 28 33 chr13 38253139 38253319 -82030993 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 876 525 175 29 6 chr13 38253333 38253505 -82030807 + (TG)n Simple_repeat Simple_repeat 2 177 0 5 876 516 170 38 0 chr13 38253519 38253678 -82030634 + (TG)n Simple_repeat Simple_repeat 2 166 0 5 876 344 171 27 9 chr13 38253694 38253806 -82030506 + (TG)n Simple_repeat Simple_repeat 1 114 0 5 876 556 242 25 0 chr13 38254196 38254316 -82029996 + B1F SINE Alu 27 149 0 5 876 183 162 0 0 chr13 38254327 38254364 -82029948 + A-rich Low_complexity Low_complexity 1 37 0 5 876 316 293 37 0 chr13 38254427 38254509 -82029803 - PB1 SINE Alu -3 124 40 5 876 577 259 62 66 chr13 38255171 38255382 -82028930 + B3A SINE B2 2 211 -5 5 876 715 269 12 29 chr13 38255505 38255677 -82028635 - B3A SINE B2 -29 169 1 5 876 531 0 0 0 chr13 38256018 38256077 -82028235 + (GGGA)n Simple_repeat Simple_repeat 2 60 0 5 876 284 253 89 51 chr13 38256183 38256262 -82028050 + 4.5SRNA scRNA scRNA 4 85 -9 5 876 538 125 177 0 chr13 38256210 38256306 -82028006 + B1_Mur4 SINE Alu 38 150 0 5 876 410 259 113 12 chr13 38256309 38256477 -82027835 + L1MC4 LINE L1 7734 7918 -124 5 876 268 214 38 42 chr13 38256884 38256969 -82027343 - ORR1D2 LTR MaLR -2 406 284 5 876 891 143 0 64 chr13 38257197 38257354 -82026958 - B1_Mur3 SINE Alu -1 148 2 5 876 859 213 69 10 chr13 38257380 38257584 -82026728 - B3 SINE B2 0 216 1 5 876 396 0 0 0 chr13 38257798 38257842 -82026470 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 5 876 334 291 25 68 chr13 38257888 38258006 -82026306 + ID_B1 SINE B4 63 175 -49 5 876 434 275 0 42 chr13 38257920 38258015 -82026297 + PB1D10 SINE Alu 13 103 -14 5 876 267 203 0 0 chr13 38258049 38258108 -82026204 + GA-rich Low_complexity Low_complexity 4 62 0 5 876 1170 78 0 0 chr13 38258398 38258578 -82025734 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 876 205 200 22 0 chr13 38258583 38258628 -82025684 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 5 876 293 68 23 0 chr13 38258906 38258950 -82025362 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 876 591 250 72 7 chr13 38258958 38259111 -82025201 - RSINE1 SINE B4 -2 163 1 5 876 534 222 0 53 chr13 38259121 38259235 -82025077 - PB1D10 SINE Alu 0 117 10 5 876 344 374 0 9 chr13 38259766 38259874 -82024438 + PB1D10 SINE Alu 3 109 -8 5 876 245 293 35 0 chr13 38259921 38259979 -82024333 + ID SINE ID 23 82 -142 5 876 195 351 26 13 chr13 38260342 38260420 -82023892 - MIR3 SINE MIR -41 167 89 5 876 29 0 0 0 chr13 38260851 38260880 -82023432 + AT_rich Low_complexity Low_complexity 1 29 0 5 876 329 307 20 0 chr13 38261319 38261420 -82022892 - PB1 SINE Alu -3 124 22 5 876 686 222 82 43 chr13 38261526 38261552 -82022760 - B3 SINE B2 0 216 193 5 876 198 0 0 0 chr13 38261552 38261574 -82022738 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 876 686 222 82 43 chr13 38261574 38261754 -82022558 - B3 SINE B2 -24 192 3 5 876 465 267 9 0 chr13 38261781 38261886 -82022426 - PB1D10 SINE Alu -7 110 5 5 876 252 0 0 0 chr13 38261898 38261926 -82022386 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 876 648 0 0 0 chr13 38262414 38262486 -82021826 + (TTTTG)n Simple_repeat Simple_repeat 2 73 0 5 876 290 286 0 0 chr13 38263392 38263469 -82020843 + ID4 SINE ID 2 78 -5 5 876 1141 61 20 7 chr13 38263596 38263744 -82020568 + B1_Mur4 SINE Alu 1 150 0 5 876 495 0 0 0 chr13 38264194 38264249 -82020063 + (TTC)n Simple_repeat Simple_repeat 3 57 0 5 876 1198 85 6 6 chr13 38264249 38264427 -82019885 + (TCC)n Simple_repeat Simple_repeat 3 180 0 5 876 493 221 11 0 chr13 38264427 38264522 -82019790 - PB1 SINE Alu -2 125 30 5 876 183 236 12 143 chr13 38265670 38265754 -82018558 - L3 LINE CR1 -3482 1007 935 5 876 534 219 99 33 chr13 38266427 38266578 -82017734 - RSINE1 SINE B4 0 165 5 5 876 246 282 39 0 chr13 38266611 38266689 -82017623 + ID4 SINE ID 3 83 0 5 876 459 0 0 0 chr13 38267114 38267165 -82017147 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 876 1150 185 24 5 chr13 38267230 38267442 -82016870 - B3 SINE B2 0 216 1 5 876 249 296 97 44 chr13 38267450 38267563 -82016749 - PB1 SINE Alu 0 127 9 5 876 738 277 52 21 chr13 38268530 38268722 -82015590 - MER58A DNA MER1_type -15 209 12 5 876 309 26 0 0 chr13 38269192 38269230 -82015082 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 876 596 252 82 0 chr13 38269236 38269371 -82014941 - RSINE1 SINE B4 -19 146 1 5 876 304 314 45 68 chr13 38269424 38269557 -82014755 + MIR3 SINE MIR 50 179 -29 5 876 258 309 80 18 chr13 38271749 38271861 -82012451 + PB1D7 SINE Alu 2 120 0 5 876 288 174 35 11 chr13 38271912 38271999 -82012313 + GA-rich Low_complexity Low_complexity 2 90 0 6 876 460 268 69 48 chr13 38272197 38272342 -82011970 + B1F2 SINE Alu 1 148 -1 6 876 231 286 0 0 chr13 38272404 38272467 -82011845 - ID4_ SINE ID -19 64 2 6 877 229 26 53 0 chr13 38273202 38273240 -82011072 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 6 877 1213 55 0 0 chr13 38273243 38273389 -82010923 - B1_Mm SINE Alu 0 147 2 6 877 192 77 0 0 chr13 38273558 38273584 -82010728 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 6 877 311 290 0 31 chr13 38275277 38275373 -82008939 - MLT1A1 LTR MaLR -3 405 313 6 877 235 300 47 65 chr13 38275547 38275654 -82008658 - MLT1A1 LTR MaLR -286 122 18 6 877 180 0 0 0 chr13 38276217 38276237 -82008075 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 877 366 23 0 0 chr13 38276237 38276279 -82008033 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 877 789 233 31 0 chr13 38276352 38276511 -82007801 - B3A SINE B2 -33 165 2 6 877 568 269 107 15 chr13 38276555 38276816 -82007496 + L1MA9 LINE L1 5875 6159 -153 6 877 375 321 55 18 chr13 38277673 38277838 -82006474 - L1MC3 LINE L1 -16 7769 7599 6 877 404 252 105 8 chr13 38277839 38277963 -82006349 - ID_B1 SINE B4 -3 221 86 6 877 299 234 17 0 chr13 38278154 38278229 -82006083 + B1F SINE Alu 1 77 -71 6 877 259 273 45 0 chr13 38278229 38278295 -82006017 - ID2 SINE ID -13 70 2 6 877 298 270 22 0 chr13 38278751 38278840 -82005472 - L1MB7 LINE L1 -202 5972 5882 6 877 21 0 0 0 chr13 38279013 38279034 -82005278 + AT_rich Low_complexity Low_complexity 1 21 0 6 877 387 283 0 39 chr13 38279039 38279142 -82005170 - PB1D10 SINE Alu -15 102 4 6 877 316 317 0 19 chr13 38279244 38279347 -82004965 - ID_B1 SINE B4 -11 213 113 6 877 387 278 136 1 chr13 38279361 38279562 -82004750 - L1MB7 LINE L1 -358 5826 5601 6 877 295 179 138 106 chr13 38279978 38280072 -82004240 + PB1D10 SINE Alu 14 110 -7 6 877 236 268 0 18 chr13 38280515 38280572 -82003740 + RSINE1 SINE B4 4 59 -106 6 877 730 169 253 11 chr13 38280773 38280947 -82003365 - B3 SINE B2 0 216 1 6 877 512 206 21 0 chr13 38281181 38281278 -82003034 + B1F1 SINE Alu 44 142 -7 6 877 214 232 41 55 chr13 38281307 38281380 -82002932 + ID4 SINE ID 2 73 -10 6 877 1291 81 43 11 chr13 38281982 38282170 -82002142 - B2_Mm2 SINE B2 0 195 2 6 877 300 197 155 0 chr13 38282832 38282903 -82001409 - B1F2 SINE Alu -61 88 7 6 877 435 38 0 0 chr13 38283080 38283133 -82001179 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 877 237 273 0 0 chr13 38285825 38285880 -81998432 + tRNA-Ala-GCY_ tRNA tRNA 14 68 -7 6 877 241 311 125 10 chr13 38291016 38291120 -81993192 - ORR1E LTR MaLR -221 138 23 6 877 306 0 0 0 chr13 38291427 38291461 -81992851 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 877 245 128 0 21 chr13 38291632 38291680 -81992632 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 6 877 1173 68 19 0 chr13 38291686 38291848 -81992464 - L1Md_F2 LINE L1 0 6582 6418 6 877 265 220 17 0 chr13 38291926 38291985 -81992327 - MLT1B LTR MaLR -77 313 254 6 877 867 123 0 23 chr13 38292149 38292282 -81992030 - B1_Mur4 SINE Alu -19 131 2 6 877 459 0 0 0 chr13 38292361 38292412 -81991900 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 877 551 263 81 69 chr13 38292421 38292682 -81991630 - L1MA5A LINE L1 -365 5932 5669 6 877 252 245 152 29 chr13 38292819 38292924 -81991388 - MLT1B LTR MaLR -272 118 1 6 877 540 241 7 34 chr13 38293274 38293420 -81990892 + RSINE1 SINE B4 3 144 -21 6 877 633 250 130 0 chr13 38293505 38293689 -81990623 - MTD LTR MaLR -211 208 1 6 877 231 61 0 0 chr13 38293721 38293754 -81990558 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 877 675 0 0 0 chr13 38294579 38294654 -81989658 + (TTC)n Simple_repeat Simple_repeat 1 75 0 6 877 366 213 27 0 chr13 38295096 38295171 -81989141 + MTE2b LTR MaLR 1 77 -302 6 877 230 146 104 0 chr13 38295468 38295516 -81988796 + B3 SINE B2 145 197 -19 6 877 216 0 0 0 chr13 38295760 38295784 -81988528 + (TC)n Simple_repeat Simple_repeat 1 24 0 6 877 669 50 19 48 chr13 38295799 38295904 -81988408 - B1_Mm SINE Alu -15 132 31 6 877 1655 42 0 0 chr13 38295933 38296123 -81988189 - B2_Mm1t SINE B2 -2 191 2 6 877 1083 92 0 60 chr13 38296125 38296309 -81988003 - B2_Mm2 SINE B2 0 195 23 6 877 1002 136 43 38 chr13 38298254 38298438 -81985874 + B2_Mm2 SINE B2 3 187 -8 6 877 1558 52 0 20 chr13 38298444 38298641 -81985671 + B2_Mm1a SINE B2 1 193 0 6 877 325 311 165 55 chr13 38298644 38298899 -81985413 - B4 SINE B4 -8 284 2 6 877 222 37 0 0 chr13 38298906 38298933 -81985379 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 877 271 335 70 80 chr13 38299283 38299484 -81984828 - MIR SINE MIR -7 255 57 6 877 1000 284 34 91 chr13 38299839 38300223 -81984089 + MTE2a LTR MaLR 16 377 -2 6 877 1257 245 62 7 chr13 38300224 38300512 -81983800 - MTE2a LTR MaLR -75 304 1 6 877 292 254 16 73 chr13 38300615 38300738 -81983574 - RSINE1 SINE B4 -35 130 15 6 877 438 226 0 45 chr13 38300948 38301059 -81983253 + PB1D10 SINE Alu 12 117 0 6 877 342 282 117 25 chr13 38301065 38301185 -81983127 + B4A SINE B4 5 135 -157 6 877 330 154 0 0 chr13 38301299 38301377 -81982935 + GA-rich Low_complexity Low_complexity 1 78 0 6 877 188 67 0 32 chr13 38301612 38301643 -81982669 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 6 877 402 196 102 10 chr13 38302356 38302454 -81981858 + B1_Mur2 SINE Alu 40 146 -3 6 877 591 257 20 27 chr13 38303941 38304089 -81980223 - RSINE1 SINE B4 -15 150 4 6 877 216 0 0 0 chr13 38304264 38304288 -81980024 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6 877 979 98 0 101 chr13 38305745 38305904 -81978408 - B1_Mus1 SINE Alu -4 144 2 6 877 298 243 81 34 chr13 38306168 38306317 -81977995 + L1MB3 LINE L1 6028 6183 0 6 877 261 0 0 0 chr13 38307457 38307486 -81976826 + (A)n Simple_repeat Simple_repeat 1 29 0 6 877 392 296 0 50 chr13 38307879 38308000 -81976312 + PB1 SINE Alu 13 127 0 6 877 1136 136 40 6 chr13 38308750 38308927 -81975385 - B2_Mm2 SINE B2 -11 184 2 6 877 638 272 11 37 chr13 38308970 38309157 -81975155 + B3A SINE B2 4 185 -13 6 877 581 229 8 0 chr13 38309667 38309785 -81974527 - B1_Mur2 SINE Alu -26 123 5 6 877 262 245 0 105 chr13 38309685 38309799 -81974513 - MT2B LTR ERVL -343 258 157 6 877 300 263 73 10 chr13 38309865 38309961 -81974351 - B3 SINE B2 0 216 115 6 877 676 163 106 0 chr13 38310959 38311082 -81973230 - B1_Mur2 SINE Alu -13 136 1 6 877 719 256 14 67 chr13 38312073 38312282 -81972030 - B3A SINE B2 0 198 1 6 877 1318 87 11 32 chr13 38312321 38312511 -81971801 - B2_Mm2 SINE B2 -8 187 2 6 877 329 312 0 0 chr13 38313459 38313539 -81970773 - ID4_ SINE ID 0 83 4 6 877 5003 171 27 39 chr13 38313559 38314510 -81969802 - Lx5 LINE L1 -3 7047 6108 6 877 316 259 99 43 chr13 38314521 38314662 -81969650 - ID_B1 SINE B4 0 224 76 6 877 3397 33 5 0 chr13 38315373 38315767 -81968545 - MTA_Mm LTR MaLR 0 396 1 6 877 821 195 0 7 chr13 38315908 38316058 -81968254 - B1_Mur2 SINE Alu 0 149 1 6 877 1218 41 7 0 chr13 38316173 38316318 -81967994 + B1_Mus2 SINE Alu 1 146 -1 6 877 564 229 109 5 chr13 38316338 38316522 -81967790 - B3 SINE B2 -12 204 2 6 877 4116 197 267 15 chr13 38316939 38317471 -81966841 - Lx9 LINE L1 -29 7615 6950 6 877 1257 98 27 5 chr13 38317471 38317655 -81966657 - B2_Mm2 SINE B2 -6 189 2 6 877 4116 178 82 19 chr13 38317655 38318400 -81965912 - Lx9 LINE L1 -695 6949 6157 6 877 586 281 20 0 chr13 38318495 38318641 -81965671 + B1_Mur1 SINE Alu 1 149 0 6 877 281 256 66 94 chr13 38320140 38320321 -81963991 + B4 SINE B4 117 292 0 6 877 2275 42 18 0 chr13 38321275 38321763 -81962549 - RLTR10C LTR ERVK -8 428 1 6 877 21 0 0 0 chr13 38321894 38321915 -81962397 + AT_rich Low_complexity Low_complexity 1 21 0 6 877 304 273 40 10 chr13 38322990 38323090 -81961222 + MLT1A1 LTR MaLR 306 408 0 6 877 277 312 54 47 chr13 38323308 38323456 -81960856 + ORR1E LTR MaLR 1 149 -210 6 877 707 201 27 7 chr13 38323682 38323832 -81960480 + B3 SINE B2 3 155 -61 6 877 787 153 0 0 chr13 38323830 38323954 -81960358 - B1_Mur2 SINE Alu -24 125 2 6 877 608 255 14 7 chr13 38323970 38324108 -81960204 - B1F1 SINE Alu -10 139 1 6 877 325 319 8 8 chr13 38324302 38324419 -81959893 - Lx8 LINE L1 -134 7339 7223 6 877 1076 77 14 5 chr13 38325027 38325237 -81959075 + (TG)n Simple_repeat Simple_repeat 1 211 0 6 877 1089 121 97 6 chr13 38326515 38326690 -81957622 - B2_Mm2 SINE B2 -4 191 1 6 877 1067 251 92 3 chr13 38326712 38327004 -81957308 + MTD LTR MaLR 46 363 -56 6 877 2296 131 36 38 chr13 38327749 38327780 -81956532 - RMER10A LTR ERVL 0 442 417 6 877 2426 72 25 0 chr13 38327780 38328098 -81956214 + ORR1A2 LTR MaLR 1 326 -1 6 877 2296 131 36 38 chr13 38328098 38328509 -81955803 - RMER10A LTR ERVL -26 416 1 6 877 667 289 24 9 chr13 38328539 38328676 -81955636 - L1MA5A LINE L1 -365 5932 5747 6 877 252 0 0 0 chr13 38328676 38328704 -81955608 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 877 760 281 81 48 chr13 38328704 38329240 -81955072 - L1MA5A LINE L1 -134 5746 5181 6 877 523 244 122 6 chr13 38329240 38329421 -81954891 - RMER30 DNA MER1_type 0 202 1 6 877 251 321 104 80 chr13 38329421 38329437 -81954875 - L1MA5A LINE L1 -706 5180 5162 6 877 233 172 62 15 chr13 38329467 38329532 -81954780 - B3 SINE B2 -9 207 140 7 877 256 365 33 16 chr13 38330310 38330494 -81953818 - MER52-int LTR ERV1 -5278 1813 1627 7 877 830 137 0 54 chr13 38330520 38330667 -81953645 - B1_Mus2 SINE Alu 0 147 9 7 877 629 254 76 12 chr13 38330720 38330891 -81953421 - B3A SINE B2 -16 182 1 7 877 790 64 144 0 chr13 38332084 38332209 -81952103 + B1_Mus1 SINE Alu 6 148 0 7 877 282 171 42 14 chr13 38332217 38332288 -81952024 + Lx9 LINE L1 7351 7423 -221 7 877 411 174 82 0 chr13 38332287 38332385 -81951927 + Lx9 LINE L1 7536 7641 -3 7 877 22 35 0 0 chr13 38332385 38332414 -81951898 + AT_rich Low_complexity Low_complexity 1 29 0 7 877 1332 62 23 6 chr13 38332440 38332617 -81951695 - B2_Mm2 SINE B2 -14 181 2 7 877 903 75 8 0 chr13 38332617 38332750 -81951562 - RLTR11B LTR ERVK -319 134 1 7 877 532 196 62 39 chr13 38333105 38333320 -81950992 + ORR1B1 LTR MaLR 1 225 -102 7 877 216 0 0 0 chr13 38333361 38333385 -81950927 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 877 362 161 10 31 chr13 38333387 38333483 -81950829 + (TA)n Simple_repeat Simple_repeat 2 95 0 7 877 2291 61 3 26 chr13 38333483 38333787 -81950525 + ORR1A2 LTR MaLR 31 327 0 7 877 183 297 68 0 chr13 38334137 38334211 -81950101 + L2 LINE L2 1859 1937 -1482 7 877 450 0 0 0 chr13 38334214 38334264 -81950048 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 877 360 244 103 7 chr13 38335325 38335461 -81948851 + B1F2 SINE Alu 1 149 0 7 877 321 258 128 64 chr13 38336221 38336293 -81948019 - MLT1A1 LTR MaLR 0 408 335 7 877 1141 84 0 0 chr13 38336293 38336435 -81947877 + B1_Mus1 SINE Alu 2 143 -5 7 877 904 125 12 0 chr13 38336435 38336595 -81947717 + (TA)n Simple_repeat Simple_repeat 2 163 0 7 877 321 258 128 64 chr13 38336595 38336662 -81947650 - MLT1A1 LTR MaLR -74 334 260 7 877 432 0 0 0 chr13 38336835 38336883 -81947429 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 877 354 80 0 0 chr13 38336883 38336933 -81947379 + (TTG)n Simple_repeat Simple_repeat 1 50 0 7 877 3219 134 39 97 chr13 38337155 38337793 -81946519 + MT2B LTR ERVL 1 601 0 7 877 319 255 48 67 chr13 38337881 38337986 -81946326 - MLT1A1 LTR MaLR -279 129 27 7 877 244 125 167 0 chr13 38338012 38338060 -81946252 - MLT1A1 LTR MaLR -352 56 1 7 877 238 289 0 0 chr13 38338272 38338324 -81945988 - PB1D10 SINE Alu -47 70 19 7 877 714 24 0 0 chr13 38338729 38338813 -81945499 + (GA)n Simple_repeat Simple_repeat 2 85 0 7 877 982 284 7 54 chr13 38338835 38339129 -81945183 - MLT2D LTR ERVL -93 321 42 7 877 879 206 0 0 chr13 38339197 38339338 -81944974 + B1_Mur1 SINE Alu 1 141 -8 7 877 276 263 7 13 chr13 38339699 38339853 -81944459 + GA-rich Low_complexity Low_complexity 2 154 0 7 877 789 238 147 20 chr13 38340139 38340336 -81943976 - MER58A DNA MER1_type 0 224 3 7 877 353 70 18 0 chr13 38341290 38341347 -81942965 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 877 571 217 71 14 chr13 38341367 38341507 -81942805 + B1_Mur2 SINE Alu 1 148 -1 7 877 269 151 19 0 chr13 38341507 38341560 -81942752 + A-rich Low_complexity Low_complexity 1 54 0 7 877 1106 60 0 0 chr13 38341905 38342038 -81942274 - B1_Mus1 SINE Alu -11 137 5 7 877 2899 217 80 84 chr13 38342511 38343353 -81940959 + Lx8 LINE L1 6310 7147 -326 7 877 306 239 234 21 chr13 38343350 38343382 -81940930 + Lx8 LINE L1 7300 7331 -142 7 877 504 0 0 0 chr13 38343382 38343438 -81940874 + (GA)n Simple_repeat Simple_repeat 2 57 0 7 877 306 239 234 21 chr13 38343438 38343546 -81940766 + Lx8 LINE L1 7332 7469 -4 7 877 849 141 52 0 chr13 38344470 38344605 -81939707 + B1_Mus1 SINE Alu 5 146 -2 7 877 357 24 0 0 chr13 38344649 38344691 -81939621 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 7 877 271 296 70 0 chr13 38345053 38345124 -81939188 - MLT1C LTR MaLR -284 183 108 7 877 285 151 0 0 chr13 38345399 38345452 -81938860 + (TGGG)n Simple_repeat Simple_repeat 3 55 0 7 877 353 160 0 5 chr13 38346243 38346308 -81938004 - B2_Mm2 SINE B2 -107 109 47 7 877 962 100 114 42 chr13 38346340 38346507 -81937805 - B2_Mm1t SINE B2 -14 179 1 7 877 440 252 177 79 chr13 38346518 38346717 -81937595 - B4A SINE B4 -74 218 4 7 877 301 301 68 0 chr13 38346841 38346944 -81937368 - LTR78 LTR ERV1 -496 808 699 7 877 797 168 7 0 chr13 38346944 38347099 -81937213 + CT-rich Low_complexity Low_complexity 1 156 0 7 877 292 191 162 0 chr13 38347131 38347199 -81937113 - PB1D9 SINE Alu -8 112 34 7 877 329 360 130 58 chr13 38347241 38347671 -81936641 - LTR78 LTR ERV1 -633 671 211 7 877 806 196 107 7 chr13 38347756 38347941 -81936371 + MLT1A0 LTR MaLR 10 219 -189 7 877 291 211 0 0 chr13 38347913 38347970 -81936342 + MLT2B2 LTR ERVL 46 102 -413 7 877 246 62 0 0 chr13 38347973 38348005 -81936307 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 877 239 167 0 15 chr13 38348007 38348074 -81936238 + GA-rich Low_complexity Low_complexity 2 67 0 7 877 255 390 53 34 chr13 38348194 38348457 -81935855 - B4 SINE B4 0 292 25 7 877 249 366 26 46 chr13 38348452 38348604 -81935708 + MER74B LTR ERVL 72 220 -402 7 877 564 15 0 0 chr13 38348944 38349009 -81935303 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 7 877 614 289 149 0 chr13 38349193 38349394 -81934918 - Tigger7 DNA MER2_type -138 2353 2123 7 877 675 273 17 0 chr13 38349411 38349587 -81934725 + MER44B DNA MER2_type 123 301 -249 7 877 264 312 10 61 chr13 38349546 38349645 -81934667 - Tigger7 DNA MER2_type -2330 161 68 7 877 2320 165 48 2 chr13 38349667 38350062 -81934250 - MTC LTR MaLR -8 413 1 7 877 319 375 98 10 chr13 38350206 38350400 -81933912 - MER115 DNA Tip100 -337 356 146 7 877 462 18 0 0 chr13 38350867 38350922 -81933390 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 877 708 217 33 47 chr13 38350922 38351072 -81933240 - B3A SINE B2 -50 148 1 7 877 519 286 68 43 chr13 38351380 38351541 -81932771 + ID_B1 SINE B4 60 224 0 7 877 558 0 0 0 chr13 38352224 38352286 -81932026 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 7 877 365 207 18 41 chr13 38353992 38354109 -81930203 + PB1D10 SINE Alu 2 119 -8 7 877 27 49 0 0 chr13 38354172 38354213 -81930099 + AT_rich Low_complexity Low_complexity 1 41 0 7 877 473 47 16 0 chr13 38354256 38354320 -81929992 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 877 335 263 26 0 chr13 38354424 38354500 -81929812 + RSINE1 SINE B4 82 159 -6 7 877 648 267 60 12 chr13 38354515 38354682 -81929630 - B4A SINE B4 -112 180 6 7 877 195 100 0 0 chr13 38354696 38354726 -81929586 + (TTG)n Simple_repeat Simple_repeat 3 32 0 7 877 432 0 0 0 chr13 38355162 38355210 -81929102 + (TC)n Simple_repeat Simple_repeat 2 49 0 7 877 458 278 0 0 chr13 38355219 38355309 -81929003 - RSINE1 SINE B4 -61 104 15 7 877 294 95 0 0 chr13 38355324 38355366 -81928946 + (TCC)n Simple_repeat Simple_repeat 2 43 0 7 877 467 239 80 0 chr13 38355372 38355460 -81928852 - PB1D10 SINE Alu -21 96 2 7 877 247 331 178 0 chr13 38355575 38355738 -81928574 - MLT1G1 LTR MaLR -5 564 373 7 877 495 322 115 17 chr13 38355759 38356068 -81928244 - MLT1G1 LTR MaLR -296 295 1 7 877 4241 162 34 7 chr13 38356271 38356998 -81927314 - Lx5 LINE L1 0 7050 6304 7 877 837 273 132 70 chr13 38357053 38357065 -81927247 + B4A SINE B4 1 12 -280 7 877 2418 88 25 0 chr13 38357065 38357384 -81926928 + ORR1A2 LTR MaLR 1 327 0 7 877 837 273 132 70 chr13 38357384 38357643 -81926669 + B4A SINE B4 13 289 -3 7 877 1512 210 68 70 chr13 38357645 38357966 -81926346 - ORR1D2 LTR MaLR -2 368 41 7 877 2758 180 31 74 chr13 38357966 38358601 -81925711 + RMER19C LTR ERVK 1 608 -3 7 877 1512 210 68 70 chr13 38358601 38358648 -81925664 - ORR1D2 LTR MaLR -330 40 1 7 877 222 280 0 0 chr13 38358650 38358700 -81925612 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 877 1263 94 0 0 chr13 38358957 38359137 -81925175 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 7 877 389 269 40 66 chr13 38359370 38359451 -81924861 + B1F SINE Alu 1 85 -64 7 877 1665 145 128 0 chr13 38359451 38359741 -81924571 + ORR1A4 LTR MaLR 1 327 -2 7 877 389 269 40 66 chr13 38359741 38359810 -81924502 + B1F SINE Alu 86 147 -2 7 877 247 333 0 24 chr13 38359830 38359913 -81924399 + ID4_ SINE ID 2 82 -1 7 877 942 224 66 37 chr13 38359998 38360271 -81924041 + RLTR20D LTR ERVK 3 283 -285 7 877 450 258 70 39 chr13 38360262 38360323 -81923989 + RLTR20D LTR ERVK 423 482 -96 7 877 468 35 0 0 chr13 38360323 38360381 -81923931 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 877 450 258 70 39 chr13 38360381 38360448 -81923864 + RLTR20D LTR ERVK 483 555 -23 7 877 543 268 52 87 chr13 38360475 38360704 -81923608 + ID_B1 SINE B4 1 221 -3 7 877 1068 82 0 102 chr13 38360719 38360895 -81923417 + B2_Mm2 SINE B2 2 159 -36 7 877 459 0 0 0 chr13 38360895 38360946 -81923366 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 7 877 1077 291 87 20 chr13 38361025 38361464 -81922848 + L1MB1 LINE L1 5604 6071 -97 7 877 493 250 56 14 chr13 38361517 38361659 -81922653 + B1F1 SINE Alu 1 148 -1 7 877 230 0 62 42 chr13 38361789 38361837 -81922475 - B2_Mm2 SINE B2 -1 194 146 7 877 1394 91 5 0 chr13 38361837 38362024 -81922288 - B2_Mm1a SINE B2 -5 188 1 7 877 241 26 26 26 chr13 38362507 38362546 -81921766 + (TTATA)n Simple_repeat Simple_repeat 1 39 0 7 877 228 86 0 0 chr13 38362858 38362893 -81921419 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 877 452 182 108 69 chr13 38362982 38363112 -81921200 + B1F1 SINE Alu 12 146 -3 7 877 876 299 82 0 chr13 38363119 38363363 -81920949 + B4A SINE B4 1 264 -28 7 877 567 107 0 0 chr13 38363374 38363458 -81920854 + (TA)n Simple_repeat Simple_repeat 2 85 0 7 877 331 320 0 0 chr13 38363475 38363553 -81920759 + B4A SINE B4 215 292 0 7 877 374 96 0 0 chr13 38363562 38363614 -81920698 + HAL1-3A_ME LINE L1 1974 2025 -833 7 877 260 291 39 10 chr13 38363624 38363728 -81920584 + BC1_Mm scRNA scRNA 9 115 -37 7 877 746 143 8 0 chr13 38363728 38363861 -81920451 + GA-rich Low_complexity Low_complexity 1 134 0 7 877 957 233 105 102 chr13 38363902 38364246 -81920066 - MTE2a LTR MaLR -14 365 21 7 877 747 289 90 61 chr13 38364592 38364971 -81919341 - MLT1B LTR MaLR 0 390 1 7 877 373 321 0 0 chr13 38365216 38365325 -81918987 - PB1D10 SINE Alu -8 109 1 8 877 1546 98 108 28 chr13 38365552 38365803 -81918509 - L1Md_F2 LINE L1 -2 6580 6310 8 877 332 149 4 42 chr13 38365803 38365866 -81918446 + B1_Mus2 SINE Alu 78 139 -10 8 877 441 0 0 0 chr13 38365866 38365915 -81918397 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 8 877 332 113 0 36 chr13 38365915 38365926 -81918386 + B1_Mus2 SINE Alu 138 147 0 8 877 1357 88 0 44 chr13 38365941 38366144 -81918168 + B2_Mm2 SINE B2 2 195 0 8 877 1454 211 24 94 chr13 38366156 38366569 -81917743 + ORR1C2 LTR MaLR 1 384 0 8 877 1107 231 57 77 chr13 38366818 38367184 -81917128 + ORR1E LTR MaLR 1 359 0 8 877 1697 278 55 94 chr13 38367192 38367555 -81916757 + MTE-int LTR MaLR 1008 1384 -196 8 877 2905 129 31 43 chr13 38367555 38368071 -81916241 + Lx4A LINE L1 6540 7049 -9 8 877 1697 278 55 94 chr13 38368071 38368249 -81916063 + MTE-int LTR MaLR 1385 1527 -53 8 877 446 330 8 0 chr13 38368249 38368367 -81915945 + ORR1E LTR MaLR 1 119 -240 8 877 238 303 101 47 chr13 38368993 38369142 -81915170 - Charlie16a DNA MER1_type -117 225 69 8 877 340 208 7 37 chr13 38369921 38370056 -81914256 + CT-rich Low_complexity Low_complexity 1 131 0 8 877 198 103 0 0 chr13 38370269 38370298 -81914014 + (GGGAGA)n Simple_repeat Simple_repeat 2 30 0 8 877 272 220 0 0 chr13 38370534 38370584 -81913728 + ID_B1 SINE B4 84 133 -91 8 877 272 227 167 0 chr13 38370584 38370600 -81913712 + PB1D7 SINE Alu 3 79 -41 8 877 525 252 84 0 chr13 38370664 38370795 -81913517 - B1_Mus1 SINE Alu -6 142 1 8 877 821 110 38 45 chr13 38371682 38371815 -81912497 - B2_Mm2 SINE B2 -63 132 1 8 877 414 0 0 0 chr13 38371831 38371877 -81912435 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 877 964 157 0 13 chr13 38371877 38372032 -81912280 - B2_Mm2 SINE B2 -42 153 1 8 877 788 281 106 8 chr13 38372246 38372483 -81911829 - B4 SINE B4 -1 291 32 8 877 207 100 0 0 chr13 38373626 38373656 -81910656 + (T)n Simple_repeat Simple_repeat 1 30 0 8 877 328 211 65 13 chr13 38374454 38374531 -81909781 - MLT1A1 LTR MaLR 0 408 328 8 877 324 284 49 0 chr13 38375656 38375737 -81908575 - PB1 SINE Alu -42 85 1 8 877 227 390 47 47 chr13 38375904 38376095 -81908217 + LTR78 LTR ERV1 98 288 -1016 8 877 1912 176 23 29 chr13 38376095 38376446 -81907866 - RMER19C LTR ERVK 0 611 263 8 877 1145 169 28 134 chr13 38377235 38377357 -81906955 + URR1A DNA MER1_type 1 122 -104 8 877 408 70 0 0 chr13 38377357 38377414 -81906898 + L1_Mus2 LINE L1 6510 6566 0 8 877 1145 169 28 134 chr13 38377414 38377544 -81906768 + URR1A DNA MER1_type 123 226 0 8 877 230 106 0 21 chr13 38377911 38377959 -81906353 + (TGAA)n Simple_repeat Simple_repeat 4 50 0 8 877 640 290 67 93 chr13 38378017 38378300 -81906012 - ORR1E LTR MaLR -5 354 79 8 877 2205 107 89 40 chr13 38378300 38378672 -81905640 + ORR1B1 LTR MaLR 1 390 -4 8 877 1069 123 8 8 chr13 38378672 38378865 -81905447 + ORR1B1 LTR MaLR 149 390 -4 8 877 381 271 157 41 chr13 38378950 38379192 -81905120 - B4A SINE B4 -18 274 5 8 877 343 242 141 45 chr13 38379229 38379385 -81904927 - MER20 DNA MER1_type -23 196 26 8 877 455 273 106 53 chr13 38379489 38379640 -81904672 - RSINE1 SINE B4 0 165 7 8 877 243 0 0 0 chr13 38379703 38379730 -81904582 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 8 877 712 267 229 0 chr13 38379935 38380201 -81904111 - MLT1B LTR MaLR -63 327 1 8 877 252 0 0 0 chr13 38380959 38380987 -81903325 + (A)n Simple_repeat Simple_repeat 1 28 0 8 877 485 56 42 0 chr13 38381302 38381373 -81902939 + (TTTTC)n Simple_repeat Simple_repeat 2 75 0 8 877 189 261 117 42 chr13 38381997 38382117 -81902195 - MIRb SINE MIR -33 235 107 8 877 627 14 0 0 chr13 38382883 38382955 -81901357 + (GA)n Simple_repeat Simple_repeat 1 72 0 8 877 541 135 11 11 chr13 38383131 38383221 -81901091 + B1_Mur4 SINE Alu 59 148 -2 8 877 185 43 41 61 chr13 38383221 38383270 -81901042 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 8 877 180 0 0 0 chr13 38383278 38383298 -81901014 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 8 877 442 181 10 41 chr13 38383353 38383451 -81900861 - B1_Mur4 SINE Alu -55 95 1 8 877 265 303 0 108 chr13 38383451 38383478 -81900834 - B4 SINE B4 -211 81 67 8 877 563 317 106 24 chr13 38383479 38383809 -81900503 + MLT2F LTR ERVL 189 545 -118 8 877 383 124 22 0 chr13 38384860 38384949 -81899363 + (TCTG)n Simple_repeat Simple_repeat 2 92 0 8 877 236 316 79 0 chr13 38384950 38385026 -81899286 - ID4_ SINE ID 0 83 2 8 877 461 241 114 51 chr13 38385111 38385286 -81899026 - MLT1J2 LTR MaLR -261 187 2 8 877 418 295 53 23 chr13 38385561 38385693 -81898619 - Tigger5 DNA MER2_type -2265 141 6 8 877 603 228 73 7 chr13 38385832 38385969 -81898343 - B1_Mus2 SINE Alu -1 146 1 8 877 315 303 97 54 chr13 38386156 38386435 -81897877 - L1MA6 LINE L1 -14 6286 5996 8 877 536 234 46 40 chr13 38386771 38386922 -81897390 + MLT2D LTR ERVL 1 152 -262 8 877 640 246 37 0 chr13 38386983 38387117 -81897195 - B1F SINE Alu -7 142 4 8 877 231 152 0 42 chr13 38387119 38387167 -81897145 + MLT2F LTR ERVL 507 552 -2 8 877 522 0 0 0 chr13 38387184 38387242 -81897070 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 8 877 1231 229 76 57 chr13 38387358 38387765 -81896547 + MTD LTR MaLR 5 419 0 8 877 544 268 8 0 chr13 38388748 38388875 -81895437 + B1F2 SINE Alu 1 128 -21 8 877 717 90 72 0 chr13 38388878 38389044 -81895268 + (CAGA)n Simple_repeat Simple_repeat 2 179 0 8 877 423 0 0 0 chr13 38389538 38389585 -81894727 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 877 1656 155 156 50 chr13 38392349 38392688 -81891624 - ORR1C2 LTR MaLR -4 380 6 8 877 1101 232 21 0 chr13 38392769 38393002 -81891310 - Lx7 LINE L1 -689 7007 6770 8 877 239 284 114 0 chr13 38393150 38393238 -81891074 + MIRb SINE MIR 46 143 -125 8 877 1434 157 5 5 chr13 38393404 38393628 -81890684 + URR1B DNA MER1_type 1 224 -1 8 877 1090 277 31 22 chr13 38393960 38394281 -81890031 + ORR1E LTR MaLR 31 354 -5 8 877 205 152 0 0 chr13 38394296 38394329 -81889983 + C-rich Low_complexity Low_complexity 3 35 0 8 877 1116 132 189 5 chr13 38394700 38394890 -81889422 - URR1B DNA MER1_type 0 225 1 8 877 953 188 83 50 chr13 38395437 38395655 -81888657 + URR1B DNA MER1_type 1 225 0 8 877 328 181 0 18 chr13 38395688 38395754 -81888558 - PB1D10 SINE Alu 0 150 63 8 877 225 333 0 44 chr13 38395805 38395896 -81888416 - RSINE1 SINE B4 -1 164 78 8 877 504 266 70 21 chr13 38396277 38396419 -81887893 + B1F SINE Alu 1 149 0 8 877 391 333 93 7 chr13 38396456 38396607 -81887705 + RSINE1 SINE B4 2 165 0 8 877 504 302 99 22 chr13 38397282 38397709 -81886603 + L1MD3 LINE L1 5597 6062 -117 8 877 263 250 0 30 chr13 38397710 38397776 -81886536 - PB1D10 SINE Alu -2 115 52 8 877 339 44 0 0 chr13 38397859 38397904 -81886408 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 877 752 267 0 24 chr13 38397927 38398092 -81886220 - RSINE1 SINE B4 -3 162 2 8 877 955 250 81 19 chr13 38398311 38398572 -81885740 + RMER1B Other Other 73 349 -717 8 877 3083 197 21 167 chr13 38398584 38399480 -81884832 + RMER1B Other Other 163 927 -139 8 877 270 0 0 0 chr13 38399482 38399512 -81884800 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 8 877 1155 76 0 26 chr13 38399512 38399701 -81884611 + L1_Mus4 LINE L1 6453 6636 0 8 877 1704 177 117 14 chr13 38399846 38400196 -81884116 + ORR1B1 LTR MaLR 1 386 -8 8 877 1573 173 177 10 chr13 38400255 38400310 -81884002 - MTD LTR MaLR -17 402 311 8 877 267 31 0 0 chr13 38400310 38400342 -81883970 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 877 1573 172 187 12 chr13 38400342 38400635 -81883677 - MTD LTR MaLR -67 352 3 8 877 189 0 0 0 chr13 38400873 38400894 -81883418 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 8 877 5507 19 0 0 chr13 38400915 38401532 -81882780 + L1Md_A LINE L1 5966 6582 0 8 877 447 130 30 0 chr13 38401869 38401969 -81882343 + (CA)n Simple_repeat Simple_repeat 2 104 0 8 877 201 59 0 81 chr13 38402646 38402683 -81881629 - MIR3 SINE MIR -7 201 168 8 877 412 346 11 6 chr13 38403474 38403651 -81880661 + CT-rich Low_complexity Low_complexity 1 178 0 8 877 762 11 0 0 chr13 38403777 38403864 -81880448 + (TG)n Simple_repeat Simple_repeat 2 88 0 8 878 761 58 16 70 chr13 38405202 38405387 -81878925 + (TTCTCC)n Simple_repeat Simple_repeat 4 178 0 8 878 1671 292 146 29 chr13 38405451 38405554 -81878758 - Lx8 LINE L1 0 7473 7330 8 878 294 29 0 0 chr13 38405554 38405589 -81878723 + (CAA)n Simple_repeat Simple_repeat 2 36 0 8 878 1671 292 146 29 chr13 38405589 38406212 -81878100 - Lx8 LINE L1 -144 7329 6662 8 878 339 329 7 41 chr13 38407063 38407209 -81877103 + ORSL DNA Tip100 26 166 -109 8 878 350 149 135 0 chr13 38407210 38407284 -81877028 - HAL1-3A_ME LINE L1 -846 2012 1929 8 878 613 281 82 19 chr13 38407302 38407502 -81876810 + MER2 DNA MER2_type 9 221 -124 8 878 371 316 64 45 chr13 38407502 38407791 -81876521 + B4A SINE B4 1 278 -14 8 878 342 0 0 0 chr13 38407807 38407845 -81876467 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 878 1958 170 52 3 chr13 38407939 38408305 -81876007 + ORR1C2 LTR MaLR 1 384 0 8 878 526 317 25 0 chr13 38408773 38408934 -81875378 - RSINE1 SINE B4 0 165 1 8 878 486 0 0 0 chr13 38409041 38409095 -81875217 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 878 675 87 0 0 chr13 38409200 38409304 -81875008 + (TCTA)n Simple_repeat Simple_repeat 3 106 0 8 878 657 259 6 18 chr13 38409305 38409470 -81874842 - RSINE1 SINE B4 0 165 3 9 878 306 0 0 0 chr13 38410164 38410198 -81874114 + (TTATG)n Simple_repeat Simple_repeat 2 35 0 9 878 207 0 0 0 chr13 38410647 38410670 -81873642 + (TA)n Simple_repeat Simple_repeat 2 24 0 9 878 225 0 0 0 chr13 38410670 38410694 -81873618 + (TG)n Simple_repeat Simple_repeat 2 26 0 9 878 23 33 0 0 chr13 38410895 38410925 -81873387 + AT_rich Low_complexity Low_complexity 1 30 0 9 878 897 251 15 5 chr13 38410961 38411161 -81873151 + B3 SINE B2 8 209 -7 9 878 330 281 31 15 chr13 38411300 38411430 -81872882 + L1MA4A LINE L1 5814 5945 -358 9 878 951 203 77 10 chr13 38413098 38413292 -81871020 - B3 SINE B2 -2 214 8 9 878 233 216 0 136 chr13 38413294 38413353 -81870959 + ID_B1 SINE B4 135 185 -39 9 878 668 125 53 18 chr13 38413380 38413551 -81870761 + GA-rich Low_complexity Low_complexity 1 177 0 9 878 1385 55 55 6 chr13 38413834 38414017 -81870295 - B2_Mm2 SINE B2 -2 193 2 9 878 306 269 62 71 chr13 38414048 38414270 -81870042 + MTEa LTR MaLR 158 379 0 9 878 535 200 0 9 chr13 38414506 38414517 -81869795 - PB1D9 SINE Alu 0 120 110 9 878 669 25 0 0 chr13 38414517 38414596 -81869716 + (TC)n Simple_repeat Simple_repeat 2 80 0 9 878 570 176 0 10 chr13 38414596 38414706 -81869606 - B1_Mur4 SINE Alu -11 109 1 9 878 267 285 49 84 chr13 38414706 38414744 -81869568 - MT2B LTR ERVL -450 151 119 9 878 784 170 119 0 chr13 38414769 38414928 -81869384 - B3A SINE B2 -20 178 1 9 878 399 310 82 4 chr13 38414935 38415077 -81869235 - MIRm SINE MIR -22 186 50 9 878 187 167 83 0 chr13 38415447 38415483 -81868829 + L2b LINE L2 3329 3367 -8 9 878 762 191 13 58 chr13 38415607 38415763 -81868549 - B1F SINE Alu 0 149 1 9 878 359 309 46 36 chr13 38415763 38415958 -81868354 + L1ME3A LINE L1 5912 6108 -65 9 878 501 151 0 0 chr13 38415966 38416052 -81868260 + (CATATA)n Simple_repeat Simple_repeat 1 86 0 9 878 621 204 0 0 chr13 38416053 38416161 -81868151 + B1_Mur4 SINE Alu 5 112 -38 9 878 369 0 0 0 chr13 38416162 38416203 -81868109 + (GA)n Simple_repeat Simple_repeat 1 41 0 9 878 22 35 0 0 chr13 38416258 38416287 -81868025 + AT_rich Low_complexity Low_complexity 1 29 0 9 878 346 331 23 15 chr13 38416393 38416525 -81867787 - MamRep564 Unknown Unknown -132 225 93 9 878 405 0 0 0 chr13 38416947 38416992 -81867320 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 9 878 290 152 0 0 chr13 38417096 38417142 -81867170 - B3 SINE B2 -86 130 85 9 878 1601 22 22 0 chr13 38417600 38417783 -81866529 - B2_Mm1t SINE B2 -6 187 1 9 878 22 35 0 0 chr13 38418170 38418199 -81866113 + AT_rich Low_complexity Low_complexity 1 29 0 9 878 1078 288 99 0 chr13 38418227 38418540 -81865772 - MER2 DNA MER2_type 0 345 2 9 878 1048 271 90 6 chr13 38419128 38419456 -81864856 + MLT1A0 LTR MaLR 14 390 0 9 878 243 0 0 0 chr13 38419551 38419578 -81864734 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 878 456 19 0 0 chr13 38419578 38419630 -81864682 + (GA)n Simple_repeat Simple_repeat 2 54 0 9 878 213 39 0 0 chr13 38419633 38419659 -81864653 + (TGG)n Simple_repeat Simple_repeat 1 26 0 9 878 240 200 0 0 chr13 38419708 38419758 -81864554 + (CAA)n Simple_repeat Simple_repeat 2 51 0 9 878 370 291 146 41 chr13 38421079 38421375 -81862937 - MLT1F2 LTR MaLR -11 558 205 9 878 561 290 43 49 chr13 38421622 38421807 -81862505 - Tigger7 DNA MER2_type -2306 185 2 9 878 360 0 0 0 chr13 38421869 38421909 -81862403 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 878 438 302 0 72 chr13 38421915 38422040 -81862272 - RSINE1 SINE B4 -31 134 19 9 878 260 344 0 0 chr13 38422061 38422125 -81862187 - PB1D10 SINE Alu -42 75 12 9 878 185 371 59 25 chr13 38422205 38422324 -81861988 + L2c LINE L2 2417 2539 -880 9 878 235 294 86 86 chr13 38422483 38422658 -81861654 + L2c LINE L2 2917 3091 -296 9 878 879 168 0 20 chr13 38422670 38422822 -81861490 + B1_Mur4 SINE Alu 2 150 0 9 878 180 0 0 0 chr13 38422845 38422865 -81861447 + (T)n Simple_repeat Simple_repeat 1 20 0 9 878 389 200 13 26 chr13 38424115 38424192 -81860120 - L2b LINE L2 0 3375 3300 9 878 1544 178 58 77 chr13 38424910 38424984 -81859328 - ORR1D1 LTR MaLR 0 374 317 9 878 841 177 0 33 chr13 38424984 38425136 -81859176 - B1_Mur4 SINE Alu -2 148 2 9 878 1544 178 58 77 chr13 38425136 38425438 -81858874 - ORR1D1 LTR MaLR -58 316 5 9 878 302 260 70 39 chr13 38425915 38426043 -81858269 - L1MDa LINE L1 -4501 2132 2001 9 878 444 37 0 0 chr13 38426043 38426097 -81858215 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 9 878 1101 133 18 0 chr13 38426097 38426262 -81858050 - B2_Mm1t SINE B2 -10 183 16 9 878 769 273 123 92 chr13 38426309 38426439 -81857873 + L1MC1 LINE L1 5644 5771 -562 9 878 1398 143 4 26 chr13 38426439 38426668 -81857644 - URR1B DNA MER1_type -1 224 1 9 878 769 273 123 92 chr13 38426668 38426884 -81857428 + L1MC1 LINE L1 5772 5970 -363 9 878 1687 95 198 0 chr13 38426884 38427157 -81857155 + ORR1A4 LTR MaLR 1 327 -2 9 878 769 273 123 92 chr13 38427157 38427459 -81856853 + L1MC1 LINE L1 5971 6313 -20 9 878 233 314 55 0 chr13 38427735 38427859 -81856453 + L1MDa LINE L1 1422 1564 -5069 9 878 793 271 46 38 chr13 38427914 38428152 -81856160 - ID_B1 SINE B4 -47 245 1 9 878 258 271 153 20 chr13 38428164 38428262 -81856050 - ID_B1 SINE B4 -33 191 81 9 878 634 267 104 15 chr13 38428264 38428523 -81855789 + L1MDa LINE L1 1608 1889 -4744 9 878 754 286 84 33 chr13 38428559 38428834 -81855478 + MTD LTR MaLR 6 294 -125 9 878 1627 116 0 0 chr13 38428834 38429059 -81855253 - MERVL_2A-int LTR ERVL -3421 2064 1840 9 878 4179 135 11 3 chr13 38429055 38429670 -81854642 - MERVL_2A-int LTR ERVL -3893 1868 1249 9 878 318 262 73 103 chr13 38429678 38429745 -81854567 - L1MC3 LINE L1 -102 7683 7628 9 878 1143 114 62 0 chr13 38429745 38429921 -81854391 - B2_Mm2 SINE B2 -8 187 1 9 878 318 262 73 103 chr13 38429921 38429989 -81854323 - L1MC3 LINE L1 -158 7627 7552 9 878 543 183 0 0 chr13 38429989 38430169 -81854143 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 878 278 235 0 7 chr13 38430173 38430323 -81853989 + (TCTCTG)n Simple_repeat Simple_repeat 6 154 0 9 878 513 157 0 33 chr13 38430358 38430542 -81853770 + (TCTCTG)n Simple_repeat Simple_repeat 1 178 0 9 878 280 236 181 25 chr13 38430604 38430703 -81853609 - PB1D10 SINE Alu -2 118 1 9 878 280 73 0 68 chr13 38430783 38430827 -81853485 + MamRep1879 DNA hAT? 65 105 -111 9 878 189 373 91 30 chr13 38431004 38431236 -81853076 + L2 LINE L2 2623 2868 -551 9 878 26 0 0 0 chr13 38431427 38431453 -81852859 + AT_rich Low_complexity Low_complexity 1 26 0 9 878 335 393 49 16 chr13 38431572 38431908 -81852404 + L2a LINE L2 2823 3166 -260 9 878 518 329 72 49 chr13 38431989 38432254 -81852058 - MLT1E2 LTR MaLR -15 612 342 9 878 283 285 36 102 chr13 38432303 38432440 -81851872 - MLT1E2 LTR MaLR -283 222 95 9 878 208 345 83 0 chr13 38432570 38432654 -81851658 + L2a LINE L2 3283 3373 -2 9 878 443 248 18 37 chr13 38432728 38432837 -81851475 - PB1D10 SINE Alu 0 117 11 9 878 540 187 14 8 chr13 38433957 38434071 -81850241 - B1_Mur3 SINE Alu -4 145 1 9 878 1534 35 0 0 chr13 38435429 38435603 -81848709 - B2_Mm1a SINE B2 -18 175 2 9 878 21 57 0 0 chr13 38437766 38437801 -81846511 + GC_rich Low_complexity Low_complexity 1 35 0 9 878 22 0 0 0 chr13 38437897 38437919 -81846393 + GC_rich Low_complexity Low_complexity 1 22 0 9 878 270 0 0 0 chr13 38438119 38438149 -81846163 + (CAG)n Simple_repeat Simple_repeat 1 30 0 9 878 211 235 43 96 chr13 38439226 38439320 -81844992 + MIR SINE MIR 65 153 -55 9 878 270 310 47 94 chr13 38440027 38440198 -81844114 + MER5B DNA MER1_type 9 171 -7 9 878 224 130 56 0 chr13 38440230 38440284 -81844028 + A-rich Low_complexity Low_complexity 2 58 0 9 878 256 287 65 65 chr13 38440308 38440446 -81843866 + MER5B DNA MER1_type 22 159 -19 9 878 387 0 0 0 chr13 38440497 38440540 -81843772 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 878 378 204 26 0 chr13 38440694 38440807 -81843505 + CT-rich Low_complexity Low_complexity 2 117 0 9 878 765 128 17 34 chr13 38440819 38440997 -81843315 + CT-rich Low_complexity Low_complexity 2 176 0 9 878 351 343 18 18 chr13 38441052 38441162 -81843150 - PB1D10 SINE Alu -7 110 1 9 878 201 39 0 0 chr13 38442052 38442078 -81842234 + (T)n Simple_repeat Simple_repeat 1 26 0 9 878 198 0 0 0 chr13 38442959 38442981 -81841331 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 9 878 268 246 29 0 chr13 38443445 38443514 -81840798 - ID4_ SINE ID -12 71 1 9 878 294 29 0 0 chr13 38444538 38444573 -81839739 + (TG)n Simple_repeat Simple_repeat 1 35 0 9 878 237 299 82 0 chr13 38444599 38444696 -81839616 - PB1D9 SINE Alu -10 110 6 9 878 25 31 0 0 chr13 38444696 38444728 -81839584 + AT_rich Low_complexity Low_complexity 1 32 0 9 878 189 0 0 0 chr13 38445605 38445626 -81838686 + (T)n Simple_repeat Simple_repeat 1 21 0 9 878 267 103 0 0 chr13 38446369 38446408 -81837904 + (GA)n Simple_repeat Simple_repeat 2 40 0 9 878 610 258 142 20 chr13 38446425 38446678 -81837634 - L1MC1 LINE L1 -20 6313 6030 9 878 264 120 0 0 chr13 38447231 38447281 -81837031 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 9 878 627 234 7 0 chr13 38447955 38448092 -81836220 - ID_B1 SINE B4 -1 223 86 9 878 1088 132 104 11 chr13 38448941 38449211 -81835101 - ORR1B2 LTR MaLR -8 359 5 9 878 228 198 145 24 chr13 38449263 38449322 -81834990 - ORR1E LTR MaLR 0 379 314 9 878 231 36 0 0 chr13 38449322 38449350 -81834962 + (TG)n Simple_repeat Simple_repeat 2 29 0 9 878 228 198 145 24 chr13 38449350 38449373 -81834939 - ORR1E LTR MaLR -66 313 287 9 878 255 258 92 10 chr13 38449764 38449862 -81834450 - MLT1A1 LTR MaLR 0 408 303 9 878 294 286 72 78 chr13 38449940 38450107 -81834205 - ORR1E LTR MaLR -174 185 20 9 878 343 119 30 0 chr13 38450157 38450224 -81834088 + (TG)n Simple_repeat Simple_repeat 2 70 0 9 878 397 277 36 0 chr13 38450354 38450466 -81833846 - B4A SINE B4 -176 116 1 9 878 405 0 0 0 chr13 38451447 38451492 -81832820 + (TG)n Simple_repeat Simple_repeat 1 45 0 9 878 234 0 0 0 chr13 38451492 38451517 -81832795 + (GA)n Simple_repeat Simple_repeat 1 26 0 9 878 307 226 37 19 chr13 38451574 38451684 -81832628 - ID2 SINE ID -41 111 5 9 878 21 0 0 0 chr13 38451806 38451827 -81832485 + AT_rich Low_complexity Low_complexity 1 21 0 9 878 318 330 34 43 chr13 38452099 38452216 -81832096 - B4A SINE B4 -61 231 116 1 878 180 0 0 0 chr13 38452288 38452308 -81832004 + (T)n Simple_repeat Simple_repeat 1 20 0 1 878 541 229 0 0 chr13 38452320 38452425 -81831887 - PB1D10 SINE Alu -12 105 1 1 878 207 0 0 0 chr13 38453035 38453058 -81831254 + (T)n Simple_repeat Simple_repeat 1 23 0 1 878 277 282 93 28 chr13 38453058 38453240 -81831072 - MER5C DNA MER1_type -75 238 45 1 878 395 182 0 13 chr13 38454102 38454180 -81830132 - ID4 SINE ID 0 83 7 1 878 1055 58 58 0 chr13 38454364 38454501 -81829811 - B1_Mm SINE Alu -1 146 2 1 878 369 62 0 0 chr13 38454598 38454646 -81829666 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 878 293 280 0 0 chr13 38455602 38455677 -81828635 - tRNA-Ala-GCY_ tRNA tRNA 0 75 1 1 878 431 268 136 52 chr13 38456664 38456936 -81827376 - L1ME2z LINE L1 -135 6309 6015 1 878 951 146 47 0 chr13 38457218 38457389 -81826923 + URR1B DNA MER1_type 14 192 -33 1 878 381 296 260 48 chr13 38457430 38457765 -81826547 + MER47B DNA MER2_type 1 406 -12 1 878 283 306 33 139 chr13 38459265 38459568 -81824744 - ORR1E LTR MaLR -12 347 77 1 878 474 317 138 36 chr13 38459986 38460261 -81824051 + MLT1E2 LTR MaLR 316 618 -9 1 878 231 36 0 0 chr13 38461060 38461088 -81823224 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 878 432 299 0 0 chr13 38461377 38461484 -81822828 + PB1D10 SINE Alu 1 107 -10 1 878 213 268 36 0 chr13 38462723 38462779 -81821533 + ID4 SINE ID 12 69 -14 1 878 468 0 0 0 chr13 38462818 38462870 -81821442 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 878 9215 45 4 1 chr13 38463089 38464882 -81819430 - L1Md_F2 LINE L1 0 6582 4784 1 878 446 204 9 0 chr13 38464998 38465106 -81819206 + (CATATA)n Simple_repeat Simple_repeat 4 112 0 1 878 312 200 157 0 chr13 38465138 38465208 -81819104 + Lx8 LINE L1 7080 7160 -313 1 878 773 301 57 46 chr13 38465379 38465730 -81818582 + MTEa LTR MaLR 19 373 -6 1 878 33 25 0 0 chr13 38466128 38466168 -81818144 + AT_rich Low_complexity Low_complexity 1 40 0 1 878 442 207 33 22 chr13 38466335 38466442 -81817870 - B1_Mur3 SINE Alu -3 124 1 1 878 284 256 7 133 chr13 38466442 38466487 -81817825 - MT2B2 LTR ERVL -431 153 126 1 878 280 212 122 78 chr13 38466658 38466863 -81817449 - Lx9 LINE L1 -15 7629 7416 1 878 1976 142 144 36 chr13 38467066 38467482 -81816830 + RMER6B LTR ERVK 1 461 0 1 878 2483 237 63 24 chr13 38469252 38469970 -81814342 + RCHARR1 DNA MER1_type 3 748 -226 1 878 582 204 45 0 chr13 38470078 38470235 -81814077 + RCHARR1 DNA MER1_type 728 891 -83 1 878 232 272 117 50 chr13 38470282 38470402 -81813910 - MLT1A0 LTR MaLR -237 128 1 1 878 674 245 12 25 chr13 38470518 38470681 -81813631 - RSINE1 SINE B4 0 165 5 1 878 2356 98 3 58 chr13 38470950 38471295 -81813017 - ORR1A3 LTR MaLR 0 326 1 1 878 604 306 93 35 chr13 38471896 38472153 -81812159 - MLT1C LTR MaLR -190 277 6 1 878 645 200 46 8 chr13 38473094 38473225 -81811087 + B1F2 SINE Alu 9 144 -5 1 878 243 0 0 0 chr13 38473317 38473344 -81810968 + (T)n Simple_repeat Simple_repeat 1 27 0 1 878 1202 68 0 0 chr13 38473344 38473491 -81810821 - B1_Mus2 SINE Alu 0 147 1 1 878 566 255 21 0 chr13 38473532 38473677 -81810635 - B1F1 SINE Alu -1 148 1 1 878 183 308 103 0 chr13 38473832 38473939 -81810373 + MIRm SINE MIR 36 153 -123 1 878 788 269 85 15 chr13 38473995 38474267 -81810045 + B4A SINE B4 2 292 0 1 878 357 24 0 0 chr13 38474361 38474403 -81809909 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 878 5665 34 0 0 chr13 38474665 38475321 -81808991 - L1Md_F2 LINE L1 -12 6570 5915 1 878 401 36 18 0 chr13 38477194 38477249 -81807063 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 878 349 245 0 113 chr13 38477321 38477445 -81806867 + MT2B LTR ERVL 155 264 -337 1 878 871 158 14 0 chr13 38477334 38477480 -81806832 + B1_Mur4 SINE Alu 3 150 0 1 878 231 61 0 0 chr13 38478901 38478934 -81805378 + (A)n Simple_repeat Simple_repeat 1 33 0 1 878 180 176 0 0 chr13 38479324 38479358 -81804954 + (ATG)n Simple_repeat Simple_repeat 1 34 0 1 878 239 286 12 49 chr13 38479367 38479448 -81804864 - ID4 SINE ID -5 78 1 1 878 725 294 57 107 chr13 38479844 38480092 -81804220 - MLT1D LTR MaLR -14 491 254 1 878 269 329 0 0 chr13 38480092 38480174 -81804138 + ID4_ SINE ID 2 83 0 1 878 725 294 57 107 chr13 38480174 38480421 -81803891 - MLT1D LTR MaLR -252 253 21 1 878 1067 171 17 39 chr13 38480547 38480778 -81803534 - URR1A DNA MER1_type 0 226 1 1 878 455 328 52 0 chr13 38481052 38481186 -81803126 + ID_B1 SINE B4 84 224 0 1 878 448 252 27 0 chr13 38481387 38481497 -81802815 - MLT1A1 LTR MaLR -290 118 1 1 878 226 286 65 28 chr13 38481693 38481801 -81802511 - MER5A DNA MER1_type -6 183 72 1 878 868 278 146 71 chr13 38481941 38482561 -81801751 - L1MCa LINE L1 -5573 935 306 1 878 279 0 0 0 chr13 38482561 38482592 -81801720 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 878 868 278 146 71 chr13 38482592 38482777 -81801535 - L1MCa LINE L1 -6203 305 69 1 878 3222 26 42 3 chr13 38483342 38483723 -81800589 - MTA_Mm LTR MaLR 0 396 1 1 878 182 238 0 0 chr13 38483989 38484031 -81800281 + MER5B DNA MER1_type 2 43 -135 1 878 4187 36 12 0 chr13 38484101 38484595 -81799717 + L1_Mus1 LINE L1 6066 6565 -2 1 878 369 0 0 0 chr13 38484606 38484647 -81799665 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 878 206 270 130 33 chr13 38486151 38486243 -81798069 + MER5B DNA MER1_type 28 128 -50 1 878 219 36 0 0 chr13 38487022 38487050 -81797262 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 1 878 2373 131 14 67 chr13 38487206 38487622 -81796690 + ORR1B1 LTR MaLR 1 394 0 1 878 586 221 14 32 chr13 38488184 38488464 -81795848 + CT-rich Low_complexity Low_complexity 1 274 0 1 878 404 281 19 19 chr13 38488503 38488608 -81795704 - PB1D10 SINE Alu -12 105 1 1 878 585 248 42 114 chr13 38488618 38488882 -81795430 - MamRep605 Unknown Unknown -601 275 31 1 878 490 254 87 93 chr13 38489641 38489937 -81794375 + ORR1E LTR MaLR 15 304 -66 1 878 330 26 0 0 chr13 38489948 38489987 -81794325 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 878 279 224 0 0 chr13 38490205 38490263 -81794049 + ORR1E LTR MaLR 321 378 -1 1 878 274 213 0 0 chr13 38491037 38491084 -81793228 + URR1B DNA MER1_type 1 47 -178 1 878 391 181 14 14 chr13 38491631 38491704 -81792608 - ID4 SINE ID -3 80 8 1 878 252 200 0 0 chr13 38491883 38491943 -81792369 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 878 243 103 0 0 chr13 38491986 38492025 -81792287 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 878 532 141 80 10 chr13 38492033 38492133 -81792179 - B1_Mus1 SINE Alu -7 141 35 1 878 558 111 56 25 chr13 38492980 38493467 -81790845 + (TG)n Simple_repeat Simple_repeat 1 502 0 1 878 202 193 0 50 chr13 38493945 38494005 -81790307 + CT-rich Low_complexity Low_complexity 3 59 0 1 878 697 273 91 16 chr13 38494091 38494419 -81789893 - L1MA4A LINE L1 -129 6027 5677 1 878 1169 49 7 0 chr13 38495456 38495600 -81788712 - B1_Mus1 SINE Alu 0 148 4 1 878 1132 82 0 0 chr13 38495925 38496071 -81788241 + B1_Mus2 SINE Alu 2 147 0 1 878 279 104 0 0 chr13 38496072 38496120 -81788192 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 1 878 364 164 0 15 chr13 38496457 38496525 -81787787 + ID4 SINE ID 5 71 -12 1 878 429 255 10 0 chr13 38496636 38496738 -81787574 + PB1D10 SINE Alu 15 117 0 1 878 353 75 0 19 chr13 38497515 38497569 -81786743 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 878 760 260 105 20 chr13 38497569 38497816 -81786496 - B4A SINE B4 -23 269 2 1 878 2318 165 15 2 chr13 38498105 38498513 -81785799 + MTC LTR MaLR 1 413 -8 1 878 225 0 0 0 chr13 38499352 38499377 -81784935 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 878 270 238 16 0 chr13 38499736 38499799 -81784513 - MER46C DNA MER2_type -10 328 265 1 878 216 163 0 0 chr13 38501468 38501511 -81782801 + T-rich Low_complexity Low_complexity 1 43 0 1 878 21 0 0 0 chr13 38502088 38502109 -81782203 + GC_rich Low_complexity Low_complexity 1 21 0 2 878 294 29 0 0 chr13 38502849 38502884 -81781428 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 878 296 313 17 25 chr13 38503010 38503128 -81781184 - PB1D10 SINE Alu 0 117 1 4 878 413 292 0 28 chr13 38503168 38503277 -81781035 + PB1D10 SINE Alu 7 112 -5 5 878 234 0 0 0 chr13 38503295 38503321 -81780991 + (T)n Simple_repeat Simple_repeat 1 26 0 6 878 351 44 0 0 chr13 38504025 38504070 -81780242 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 878 307 244 40 67 chr13 38504791 38504940 -81779372 - L1MA9 LINE L1 -106 6206 6055 8 878 815 70 9 0 chr13 38507538 38507653 -81776659 + (TTC)n Simple_repeat Simple_repeat 2 117 0 9 878 24 0 0 0 chr13 38507959 38507983 -81776329 + AT_rich Low_complexity Low_complexity 1 24 0 1 878 481 172 8 8 chr13 38509053 38509176 -81775136 + GA-rich Low_complexity Low_complexity 2 124 0 1 878 279 79 0 0 chr13 38509183 38509221 -81775091 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 1 878 198 350 51 10 chr13 38512303 38512401 -81771911 + MIR3 SINE MIR 96 197 -11 1 878 260 278 42 92 chr13 38512482 38512498 -81771814 + MT2B LTR ERVL 145 154 -447 1 878 639 202 0 0 chr13 38512498 38512612 -81771700 + B1_Mur3 SINE Alu 2 115 -34 1 878 1032 170 33 42 chr13 38513945 38514160 -81770152 - URR1B DNA MER1_type -11 214 2 1 878 1191 62 0 0 chr13 38514714 38514858 -81769454 - B1_Mus2 SINE Alu -2 145 2 1 878 1489 125 9 4 chr13 38516719 38516944 -81767368 - URR1A DNA MER1_type 0 226 1 1 878 21 0 0 0 chr13 38517504 38517525 -81766787 + AT_rich Low_complexity Low_complexity 1 21 0 1 878 227 276 48 48 chr13 38517868 38517971 -81766341 + Kanga1 DNA Tc2 1643 1745 0 2 878 1874 198 23 49 chr13 38518210 38518640 -81765672 - MTD LTR MaLR 0 419 1 2 878 430 313 46 80 chr13 38518749 38519075 -81765237 - ORR1E LTR MaLR -44 315 1 2 878 435 211 0 0 chr13 38519368 38519534 -81764778 + (TG)n Simple_repeat Simple_repeat 2 167 0 2 878 351 0 0 0 chr13 38519598 38519637 -81764675 + (TC)n Simple_repeat Simple_repeat 2 40 0 2 878 276 77 0 0 chr13 38519637 38519675 -81764637 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 878 441 0 0 0 chr13 38519770 38519819 -81764493 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 878 817 142 64 13 chr13 38519819 38519976 -81764336 + B2_Mm2 SINE B2 3 167 -28 2 878 2772 140 56 8 chr13 38520010 38520528 -81763784 + RMER4B LTR ERVK 43 585 0 2 878 221 28 0 77 chr13 38520547 38520586 -81763726 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 2 878 564 256 8 0 chr13 38522781 38522910 -81761402 + RSINE1 SINE B4 3 132 -33 3 878 21 0 0 0 chr13 38522945 38522966 -81761346 + AT_rich Low_complexity Low_complexity 1 21 0 3 878 3899 282 71 26 chr13 38522999 38523045 -81761267 + Lx8 LINE L1 6122 6174 -1299 3 878 252 0 0 0 chr13 38523045 38523073 -81761239 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 878 3899 282 71 26 chr13 38523073 38524314 -81759998 + Lx8 LINE L1 6175 7468 -5 3 878 324 337 29 46 chr13 38524451 38524625 -81759687 + MER5A DNA MER1_type 1 171 -18 3 878 234 0 0 0 chr13 38524767 38524793 -81759519 + (T)n Simple_repeat Simple_repeat 1 26 0 3 878 297 277 9 90 chr13 38526492 38526603 -81757709 - PB1D10 SINE Alu -15 102 1 3 878 638 209 108 24 chr13 38528462 38528629 -81755683 - B4 SINE B4 -69 223 43 3 878 875 187 18 113 chr13 38528632 38528744 -81755568 - B3 SINE B2 0 216 116 3 878 1385 66 66 0 chr13 38528744 38528904 -81755408 + B2_Mm2 SINE B2 3 162 -33 3 878 180 0 0 0 chr13 38528904 38528924 -81755388 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 878 1385 66 66 0 chr13 38528924 38528944 -81755368 + B2_Mm2 SINE B2 163 193 -2 3 878 875 187 18 113 chr13 38528944 38529060 -81755252 - B3 SINE B2 -101 115 10 3 878 231 230 128 96 chr13 38528949 38529074 -81755238 - ID_B1 SINE B4 -95 129 1 4 878 256 237 0 17 chr13 38529537 38529597 -81754715 - Tigger5 DNA MER2_type 0 2406 2348 4 878 230 333 53 8 chr13 38529685 38529818 -81754494 - Tigger5 DNA MER2_type -2235 171 33 4 878 365 273 40 10 chr13 38530073 38530173 -81754139 - MLT1E2 LTR MaLR -221 406 304 4 878 248 357 62 69 chr13 38530230 38530504 -81753808 - ORR1E LTR MaLR -11 348 77 4 878 273 289 89 19 chr13 38530597 38530760 -81753552 - MLT1E2 LTR MaLR -384 269 92 4 878 679 199 55 0 chr13 38530928 38531074 -81753238 + L1_Rod LINE L1 477 630 -6542 4 878 402 21 0 0 chr13 38531917 38531964 -81752348 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 878 369 0 0 0 chr13 38533454 38533495 -81750817 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 878 386 171 13 26 chr13 38533515 38533593 -81750719 - B4 SINE B4 -64 228 152 4 878 194 83 56 0 chr13 38533630 38533666 -81750646 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 4 878 405 0 0 0 chr13 38533798 38533843 -81750469 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 878 214 260 65 0 chr13 38534080 38534157 -81750155 - MIR3 SINE MIR -3 205 124 5 878 322 269 0 25 chr13 38534550 38534630 -81749682 - PB1D7 SINE Alu -1 119 42 5 878 36 53 0 0 chr13 38534720 38534777 -81749535 + AT_rich Low_complexity Low_complexity 1 57 0 5 878 219 228 12 25 chr13 38534791 38534872 -81749440 + (TAA)n Simple_repeat Simple_repeat 3 82 0 5 879 304 225 78 11 chr13 38535200 38535290 -81749022 + PB1D10 SINE Alu 14 109 -8 5 879 288 209 0 0 chr13 38536353 38536439 -81747873 + GA-rich Low_complexity Low_complexity 1 86 0 5 879 255 132 72 0 chr13 38536484 38536567 -81747745 + (CAGAGA)n Simple_repeat Simple_repeat 2 90 0 5 879 399 56 0 0 chr13 38536582 38536636 -81747676 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 879 210 37 0 0 chr13 38536878 38536905 -81747407 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 5 879 282 311 0 47 chr13 38537346 38537361 -81746951 - YREP_Mm Unknown Unknown -1509 303 235 6 879 602 183 0 0 chr13 38537361 38537465 -81746847 + ID_B1 SINE B4 109 212 -12 6 879 210 242 224 40 chr13 38537362 38537487 -81746825 + FAM SINE Alu 164 311 0 6 879 247 267 80 0 chr13 38537618 38537693 -81746619 - ID4_ SINE ID -1 82 2 6 879 258 312 100 9 chr13 38538301 38538411 -81745901 - PB1D7 SINE Alu 0 120 1 6 879 683 281 11 0 chr13 38539805 38539983 -81744329 - B3A SINE B2 -18 180 1 6 879 589 130 16 47 chr13 38542027 38542156 -81742156 - RMER17C LTR ERVK 0 410 286 6 879 239 206 12 131 chr13 38542378 38542462 -81741850 - ID4 SINE ID -8 75 2 6 879 180 0 0 0 chr13 38542856 38542876 -81741436 + (A)n Simple_repeat Simple_repeat 1 20 0 6 879 35 0 0 0 chr13 38544713 38544748 -81739564 + AT_rich Low_complexity Low_complexity 1 35 0 6 879 210 105 0 0 chr13 38544860 38544898 -81739414 + (T)n Simple_repeat Simple_repeat 1 38 0 7 879 389 250 58 14 chr13 38545769 38545907 -81738405 + L1MB5 LINE L1 6031 6174 0 7 879 638 259 96 34 chr13 38546746 38547063 -81737249 + ORR1E LTR MaLR 11 370 0 7 879 681 259 15 31 chr13 38547253 38547448 -81736864 - B3A SINE B2 -6 192 1 7 879 522 201 146 6 chr13 38547633 38547796 -81736516 + B3 SINE B2 1 182 -16 7 879 371 291 96 28 chr13 38547922 38548099 -81736213 + MLT1A0 LTR MaLR 144 332 -33 7 879 1200 67 82 33 chr13 38549117 38549301 -81735011 + B2_Mm2 SINE B2 2 194 -1 7 879 27 81 0 0 chr13 38550361 38550423 -81733889 + AT_rich Low_complexity Low_complexity 1 62 0 7 879 586 253 154 22 chr13 38550480 38550662 -81733650 + ID_B1 SINE B4 14 219 -5 7 879 304 22 44 0 chr13 38550764 38550809 -81733503 + (TC)n Simple_repeat Simple_repeat 1 47 0 7 879 238 208 0 0 chr13 38551207 38551260 -81733052 + A-rich Low_complexity Low_complexity 1 53 0 8 879 197 98 24 0 chr13 38551343 38551384 -81732928 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 879 29 28 0 0 chr13 38551789 38551825 -81732487 + AT_rich Low_complexity Low_complexity 1 36 0 8 879 235 131 0 21 chr13 38552067 38552114 -81732198 - L1MB4 LINE L1 -1 6179 6134 8 879 806 231 71 5 chr13 38552127 38552323 -81731989 - B3 SINE B2 0 216 8 8 879 948 283 160 26 chr13 38552354 38552960 -81731352 - L1MB3 LINE L1 -53 6130 5448 8 879 900 256 20 73 chr13 38554162 38554465 -81729847 - ORR1E LTR MaLR -46 313 27 8 879 195 42 0 0 chr13 38554732 38554756 -81729556 + (AGGGGG)n Simple_repeat Simple_repeat 6 29 0 8 879 484 244 84 0 chr13 38555210 38555341 -81728971 + ID_B1 SINE B4 82 223 -1 8 879 727 251 5 40 chr13 38555368 38555567 -81728745 + B3A SINE B2 6 197 -1 8 879 258 32 0 0 chr13 38555585 38555616 -81728696 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 879 643 197 0 0 chr13 38555616 38555733 -81728579 - B1_Mus1 SINE Alu -7 141 25 9 879 195 69 0 0 chr13 38555747 38555776 -81728536 + (A)n Simple_repeat Simple_repeat 1 29 0 9 879 269 264 42 0 chr13 38556636 38556708 -81727604 + B3 SINE B2 31 105 -111 9 879 596 208 28 0 chr13 38556837 38556943 -81727369 + B3 SINE B2 108 216 0 9 879 338 321 21 98 chr13 38557364 38557509 -81726803 + B3A SINE B2 80 211 -5 9 879 440 287 9 0 chr13 38557514 38557629 -81726683 + PB1D7 SINE Alu 5 120 0 9 879 605 247 31 18 chr13 38558089 38558265 -81726047 - L1MA9 LINE L1 -150 6029 5846 9 879 3593 124 63 9 chr13 38558257 38559013 -81725299 - Lx2B LINE L1 -804 6196 5407 9 879 254 239 47 141 chr13 38559148 38559382 -81724930 + RLTR21 LTR ERVK 1169 1380 -192 9 879 269 358 142 24 chr13 38559908 38560147 -81724165 - Lx8 LINE L1 -34 7439 7175 9 879 252 0 0 0 chr13 38560147 38560175 -81724137 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 879 975 276 147 16 chr13 38560175 38560530 -81723782 - Lx8 LINE L1 -299 7174 6773 9 879 2422 92 20 6 chr13 38560547 38560897 -81723415 - Lx2 LINE L1 -1 6996 6642 1 879 359 320 8 0 chr13 38560934 38561056 -81723256 - Lx8 LINE L1 -1022 6451 6329 9 879 23 0 0 0 chr13 38561138 38561161 -81723151 + AT_rich Low_complexity Low_complexity 1 23 0 1 879 342 0 0 0 chr13 38561430 38561468 -81722844 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 879 458 209 33 0 chr13 38562566 38562657 -81721655 - PB1D10 SINE Alu 0 117 24 1 879 1184 211 90 67 chr13 38563458 38563890 -81720422 - RMER10A LTR ERVL 0 442 1 1 879 406 279 34 54 chr13 38565349 38565497 -81718815 + RSINE1 SINE B4 3 147 -18 1 879 286 240 80 0 chr13 38565608 38565683 -81718629 + ID SINE ID 8 88 -136 1 879 2143 151 32 11 chr13 38565766 38566142 -81718170 - ORR1C2 LTR MaLR 0 384 1 1 879 444 302 133 65 chr13 38566907 38567201 -81717111 - ORR1E LTR MaLR -5 354 41 1 879 330 361 137 14 chr13 38567277 38567561 -81716751 - Kanga11a DNA Tc2 -407 563 245 1 879 189 147 0 0 chr13 38567595 38567629 -81716683 + (G)n Simple_repeat Simple_repeat 1 34 0 1 879 330 26 0 0 chr13 38567702 38567741 -81716571 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 879 252 0 0 0 chr13 38567741 38567768 -81716544 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 879 414 327 70 42 chr13 38567769 38567983 -81716329 - B4A SINE B4 -71 221 2 1 879 275 49 24 0 chr13 38568022 38568063 -81716249 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 879 338 219 58 58 chr13 38568085 38568240 -81716072 - L1MEg LINE L1 -1811 4335 4181 1 879 393 149 0 0 chr13 38568246 38568313 -81715999 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 879 588 268 142 60 chr13 38568313 38568687 -81715625 - L1MEg LINE L1 -1950 4196 3777 1 879 635 295 78 28 chr13 38568700 38569125 -81715187 - L1MEg LINE L1 -5376 866 421 1 879 216 158 0 0 chr13 38569374 38569412 -81714900 + (TCG)n Simple_repeat Simple_repeat 2 39 0 1 879 540 0 0 0 chr13 38570599 38570659 -81713653 + (TTC)n Simple_repeat Simple_repeat 1 60 0 1 879 314 291 110 39 chr13 38570878 38571032 -81713280 - HAL1-3A_ME LINE L1 -718 2140 1976 1 879 23 0 0 0 chr13 38571676 38571699 -81712613 + AT_rich Low_complexity Low_complexity 1 23 0 1 879 281 47 23 0 chr13 38571731 38571774 -81712538 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 879 245 200 133 0 chr13 38572159 38572219 -81712093 - ID4_ SINE ID 0 83 16 1 879 707 274 147 22 chr13 38572425 38572739 -81711573 - MLT1A1 LTR MaLR -2 406 54 1 879 242 296 90 60 chr13 38573136 38573269 -81711043 + MER65D LTR ERV1 186 322 -151 1 879 216 0 0 0 chr13 38573395 38573419 -81710893 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 879 288 0 0 0 chr13 38573419 38573450 -81710862 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 879 230 291 144 10 chr13 38573545 38573649 -81710663 + MTEb LTR MaLR 3 120 -239 1 879 214 292 15 0 chr13 38573672 38573737 -81710575 + CT-rich Low_complexity Low_complexity 3 68 0 1 879 307 302 10 10 chr13 38573815 38573912 -81710400 + MTEb LTR MaLR 267 363 -16 1 879 2366 176 5 10 chr13 38574165 38574579 -81709733 - MTC LTR MaLR -8 413 2 1 879 212 286 0 0 chr13 38574757 38574799 -81709513 - ID_B1 SINE B4 -100 124 83 1 879 232 148 43 65 chr13 38575715 38575785 -81708527 + MIRc SINE MIR 96 171 -105 1 879 180 0 0 0 chr13 38576014 38576034 -81708278 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 879 992 86 14 0 chr13 38576037 38576177 -81708135 - B1_Mus1 SINE Alu -5 143 2 1 879 291 221 84 42 chr13 38577148 38577219 -81707093 + ID4 SINE ID 1 74 -9 1 879 451 240 50 0 chr13 38578131 38578231 -81706081 - B3 SINE B2 -65 151 47 1 879 227 231 62 0 chr13 38578550 38578615 -81705697 - MLT1K LTR MaLR -63 532 464 1 879 309 322 67 40 chr13 38578724 38578873 -81705439 - MLT1K LTR MaLR -277 318 166 1 879 195 42 0 0 chr13 38579708 38579732 -81704580 + (A)n Simple_repeat Simple_repeat 1 24 0 1 879 597 269 103 30 chr13 38580443 38580646 -81703666 + ID_B1 SINE B4 3 220 -4 1 879 1011 112 0 17 chr13 38582763 38582936 -81701376 + (GGAA)n Simple_repeat Simple_repeat 3 172 0 1 879 360 0 0 0 chr13 38583708 38583748 -81700564 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 1 879 288 220 0 33 chr13 38583748 38583809 -81700503 - RSINE1 SINE B4 -106 59 1 1 879 320 244 53 43 chr13 38585157 38585251 -81699061 - MLT1A1 LTR MaLR -3 405 311 1 879 490 286 121 97 chr13 38585587 38585835 -81698477 - MER21B LTR ERV1 -590 273 20 1 879 733 232 0 66 chr13 38585849 38586001 -81698311 - B1F1 SINE Alu -6 143 2 1 879 690 315 107 62 chr13 38586361 38587175 -81697137 - L1MEd LINE L1 -4683 1532 929 1 879 288 0 0 0 chr13 38587671 38587703 -81696609 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 879 450 0 0 0 chr13 38587703 38587752 -81696560 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 879 267 311 96 26 chr13 38589738 38589954 -81694358 + Tigger5 DNA MER2_type 27 236 -2170 1 879 2267 85 18 59 chr13 38590003 38590342 -81693970 - ORR1A2 LTR MaLR -2 325 1 1 879 776 254 31 31 chr13 38593624 38593819 -81690493 + B4A SINE B4 8 202 -90 1 879 221 288 58 88 chr13 38593708 38593845 -81690467 + B1F1 SINE Alu 7 139 -10 1 879 4723 120 171 0 chr13 38594183 38595001 -81689311 + RMER17B LTR ERVK 1 958 0 1 879 401 234 33 0 chr13 38595874 38595983 -81688329 - PB1D7 SINE Alu -27 122 11 1 879 202 239 97 121 chr13 38596170 38596294 -81688018 - MIRb SINE MIR -129 139 16 1 879 1180 68 0 0 chr13 38599573 38599721 -81684591 + B1_Mus1 SINE Alu 1 148 0 1 879 264 59 0 0 chr13 38599721 38599755 -81684557 + (A)n Simple_repeat Simple_repeat 1 34 0 1 879 280 233 110 0 chr13 38600403 38600476 -81683836 - ID SINE ID -142 82 2 1 879 466 270 87 0 chr13 38600490 38600605 -81683707 - PB1 SINE Alu -2 125 1 1 879 29 28 0 0 chr13 38600656 38600692 -81683620 + AT_rich Low_complexity Low_complexity 1 36 0 1 879 322 242 40 20 chr13 38602289 38602390 -81681922 + L1MC5 LINE L1 6963 7065 -896 1 879 4034 73 7 20 chr13 38602759 38603306 -81681006 + L1Md_F2 LINE L1 6038 6577 -5 1 879 301 221 130 37 chr13 38603577 38603685 -81680627 + L1M2 LINE L1 3168 3285 -2858 1 879 668 234 69 12 chr13 38605689 38605862 -81678450 - Tigger7 DNA MER2_type -38 2453 2271 1 879 513 240 169 0 chr13 38606839 38606993 -81677319 + B3A SINE B2 3 182 -16 1 879 306 0 0 0 chr13 38607020 38607054 -81677258 + (CATA)n Simple_repeat Simple_repeat 2 35 0 1 879 1016 214 197 10 chr13 38607312 38607627 -81676685 - MTD LTR MaLR 0 421 48 1 879 2369 93 12 58 chr13 38609827 38610170 -81674142 + ORR1A2 LTR MaLR 1 327 0 1 879 412 170 82 82 chr13 38610293 38610415 -81673897 + PB1D10 SINE Alu 7 128 -19 1 879 290 313 70 0 chr13 38611840 38611955 -81672357 - MLT1A0 LTR MaLR -65 300 178 1 879 282 316 0 0 chr13 38612216 38612295 -81672017 + ID4_ SINE ID 5 83 0 1 879 245 315 219 0 chr13 38612390 38612609 -81671703 - Tigger5 DNA MER2_type -2 2404 2138 1 879 337 275 99 0 chr13 38612742 38612873 -81671439 + B1F1 SINE Alu 1 144 -5 1 879 384 22 0 0 chr13 38612931 38612976 -81671336 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 879 259 211 39 0 chr13 38614086 38614138 -81670174 - B1F SINE Alu -10 139 86 1 879 219 338 25 0 chr13 38615681 38615761 -81668551 + L2c LINE L2 3087 3168 -219 1 879 770 230 121 10 chr13 38615970 38616168 -81668144 - ID_B1 SINE B4 0 224 5 1 879 234 270 135 111 chr13 38616555 38616763 -81667549 - Kanga2_a DNA Tc2 -521 367 155 1 879 568 253 78 56 chr13 38616828 38617008 -81667304 + B3A SINE B2 9 192 -6 1 879 225 308 50 25 chr13 38617362 38617442 -81666870 - MamRep137 DNA TcMar? -238 206 125 1 879 2230 102 56 14 chr13 38617485 38617841 -81666471 - Lx LINE L1 0 6654 6284 1 879 375 229 12 12 chr13 38618424 38618508 -81665804 + PB1D10 SINE Alu 24 107 -10 1 879 776 142 21 0 chr13 38621905 38622046 -81662266 + URR1A DNA MER1_type 82 225 -1 1 879 528 16 0 0 chr13 38622921 38622982 -81661330 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 879 198 0 0 0 chr13 38623847 38623869 -81660443 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 879 216 256 51 13 chr13 38624547 38624626 -81659686 - MER5B DNA MER1_type -2 176 95 1 879 285 100 0 0 chr13 38624803 38624853 -81659459 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 879 243 0 0 0 chr13 38624853 38624880 -81659432 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 879 362 281 78 17 chr13 38624888 38625004 -81659308 - RSINE1 SINE B4 -16 149 27 1 879 548 330 133 20 chr13 38625457 38626004 -81658308 - L2 LINE L2 -661 2758 2150 1 879 281 270 128 74 chr13 38626263 38626411 -81657901 + MER57C2 LTR ERV1 247 402 -32 1 879 297 0 0 0 chr13 38626422 38626455 -81657857 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 879 552 30 0 0 chr13 38626455 38626520 -81657792 + (GA)n Simple_repeat Simple_repeat 2 67 0 1 879 441 271 0 0 chr13 38626524 38626631 -81657681 + ID_B1 SINE B4 118 224 0 1 879 209 205 149 64 chr13 38626786 38626880 -81657432 - L2 LINE L2 -1353 2066 1965 1 879 491 299 58 29 chr13 38627118 38627359 -81656953 - L2 LINE L2 -1831 1588 1341 1 879 714 291 15 154 chr13 38627992 38628329 -81655983 + B4A SINE B4 3 292 0 1 879 447 311 0 0 chr13 38628485 38628607 -81655705 + ID_B1 SINE B4 86 207 -17 1 879 288 148 0 0 chr13 38628608 38628669 -81655643 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 879 616 245 14 0 chr13 38629217 38629356 -81654956 - MER70A LTR ERVL -15 457 317 1 879 603 239 79 32 chr13 38630126 38630316 -81653996 - B4A SINE B4 -91 201 3 1 879 256 261 0 0 chr13 38630320 38630385 -81653927 - MER5A1 DNA MER1_type -6 160 96 2 879 378 0 0 0 chr13 38630402 38630444 -81653868 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 879 209 196 18 18 chr13 38630857 38630914 -81653398 - MER5A1 DNA MER1_type -101 65 9 2 879 249 275 176 0 chr13 38631012 38631103 -81653209 - L1M6 LINE L1 -4739 1757 1651 2 879 497 146 24 0 chr13 38631362 38631444 -81652868 - B1_Mur4 SINE Alu -6 144 61 2 879 774 226 32 0 chr13 38631445 38631631 -81652681 - B3 SINE B2 -24 192 1 2 879 268 291 171 0 chr13 38631649 38631766 -81652546 + RSINE1 SINE B4 1 137 -28 2 879 522 257 106 7 chr13 38631865 38632006 -81652306 + RSINE1 SINE B4 11 165 0 2 879 24 0 0 0 chr13 38632012 38632036 -81652276 + AT_rich Low_complexity Low_complexity 1 24 0 2 879 356 145 60 15 chr13 38632101 38632234 -81652078 + (TG)n Simple_repeat Simple_repeat 1 139 0 2 879 221 151 37 19 chr13 38632241 38632295 -81652017 + (ATGTG)n Simple_repeat Simple_repeat 1 55 0 2 879 608 106 52 23 chr13 38632295 38632469 -81651843 + (TG)n Simple_repeat Simple_repeat 1 179 0 2 879 1452 238 54 25 chr13 38633095 38633487 -81650825 - MTD LTR MaLR -16 403 1 2 879 695 274 10 29 chr13 38633707 38633914 -81650398 - MLT1A0 LTR MaLR 0 365 163 2 879 341 191 100 11 chr13 38633910 38634000 -81650312 - ORR1C2 LTR MaLR -122 262 165 2 879 677 244 48 32 chr13 38634637 38634823 -81649489 + B3A SINE B2 5 193 -5 2 879 2113 147 25 51 chr13 38635350 38635744 -81648568 - ORR1C2 LTR MaLR 0 384 1 2 879 252 79 0 0 chr13 38635745 38635783 -81648529 - ORR1C2-int LTR MaLR -1 1508 1471 2 879 544 307 16 38 chr13 38635783 38635969 -81648343 + B4A SINE B4 30 211 -81 2 879 205 369 0 0 chr13 38635984 38636049 -81648263 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 879 464 248 53 9 chr13 38636129 38636243 -81648069 - B1F1 SINE Alu -22 127 9 2 879 1402 227 77 14 chr13 38636309 38636662 -81647650 - MTE2b LTR MaLR -4 375 1 2 879 511 298 51 119 chr13 38637595 38637965 -81646347 + MLT1B LTR MaLR 38 382 -8 2 879 245 262 16 0 chr13 38638096 38638157 -81646155 + CT-rich Low_complexity Low_complexity 3 64 0 2 879 242 323 29 68 chr13 38638159 38638262 -81646050 - PB1D7 SINE Alu -21 99 1 2 879 451 232 17 43 chr13 38638262 38638345 -81645967 - ID SINE ID -143 81 2 2 879 1002 263 92 9 chr13 38638649 38638975 -81645337 - ORR1E LTR MaLR 0 359 7 2 879 378 0 0 0 chr13 38638980 38639022 -81645290 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 879 189 0 0 0 chr13 38640559 38640580 -81643732 + (A)n Simple_repeat Simple_repeat 1 21 0 2 879 6336 145 28 23 chr13 38641637 38643506 -81640806 + Lx7 LINE L1 541 2415 -3465 2 879 21 36 0 0 chr13 38643622 38643650 -81640662 + AT_rich Low_complexity Low_complexity 1 28 0 2 879 3990 172 41 0 chr13 38643684 38643731 -81640581 + Lx7 LINE L1 5144 5192 -688 2 879 229 0 83 0 chr13 38643731 38643767 -81640545 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 879 5608 193 38 3 chr13 38643767 38645286 -81639026 + Lx7 LINE L1 5193 6756 -940 2 879 369 191 53 53 chr13 38645264 38645358 -81638954 + Lx7 LINE L1 7024 7117 -579 2 879 231 114 0 0 chr13 38645418 38645453 -81638859 + (CACCAT)n Simple_repeat Simple_repeat 1 35 0 2 879 244 238 112 0 chr13 38645513 38645593 -81638719 + L1MA9 LINE L1 5764 5852 -460 2 879 447 242 172 35 chr13 38645625 38645852 -81638460 + L1MA9 LINE L1 5936 6193 -119 2 879 420 111 0 0 chr13 38645992 38646055 -81638257 + (CGTG)n Simple_repeat Simple_repeat 1 63 0 2 879 22 0 0 0 chr13 38647636 38647658 -81636654 + AT_rich Low_complexity Low_complexity 1 22 0 2 879 285 51 0 0 chr13 38647910 38647949 -81636363 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 879 347 267 0 0 chr13 38647978 38648053 -81636259 - RSINE1 SINE B4 -69 96 22 2 879 639 185 0 16 chr13 38648323 38648449 -81635863 + ORR1D2 LTR MaLR 1 124 -246 2 879 2067 137 3 9 chr13 38648613 38648992 -81635320 - ORR1B1 LTR MaLR 0 394 1 2 879 274 257 0 14 chr13 38649251 38649322 -81634990 + L1M4 LINE L1 91 160 -6382 2 879 314 70 56 0 chr13 38649338 38649409 -81634903 + (TTAA)n Simple_repeat Simple_repeat 4 78 0 2 879 216 0 0 0 chr13 38649455 38649479 -81634833 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 879 972 289 120 25 chr13 38649583 38649914 -81634398 + L1M4 LINE L1 309 670 -5872 2 879 252 0 0 0 chr13 38649914 38649942 -81634370 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 879 972 289 120 25 chr13 38649942 38650200 -81634112 + L1M4 LINE L1 671 954 -5588 2 879 288 0 0 0 chr13 38650238 38650270 -81634042 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 879 1394 77 5 11 chr13 38650373 38650557 -81633755 - B2_Mm1a SINE B2 -9 184 2 2 879 516 32 0 0 chr13 38650613 38650675 -81633637 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 879 545 116 223 0 chr13 38650685 38650797 -81633515 - B2_Mm2 SINE B2 -55 140 4 2 879 508 309 150 8 chr13 38650973 38651367 -81632945 + L1M4 LINE L1 2611 3060 -3584 2 879 297 346 0 0 chr13 38651385 38651463 -81632849 - ID4 SINE ID -4 79 2 2 879 893 256 112 29 chr13 38651463 38651882 -81632430 + L1M4 LINE L1 3048 3501 -3143 2 879 778 275 29 10 chr13 38651942 38652151 -81632161 + ID_B1 SINE B4 3 215 -9 2 879 195 125 0 0 chr13 38652167 38652207 -81632105 + (CAAAAA)n Simple_repeat Simple_repeat 1 40 0 2 879 26 30 0 0 chr13 38652285 38652318 -81631994 + AT_rich Low_complexity Low_complexity 1 33 0 2 879 258 333 132 25 chr13 38652896 38653466 -81630846 + L1M4 LINE L1 4066 4696 -1948 2 879 243 0 0 0 chr13 38653569 38653596 -81630716 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 879 782 234 126 5 chr13 38653725 38653923 -81630389 + ID_B1 SINE B4 1 222 -2 2 879 278 298 118 42 chr13 38654128 38654247 -81630065 + MER77 LTR ERVL 231 358 -249 2 879 306 260 0 0 chr13 38654708 38654808 -81629504 + (TG)n Simple_repeat Simple_repeat 1 100 0 2 879 273 57 0 0 chr13 38654912 38654947 -81629365 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 879 441 0 0 0 chr13 38654947 38654995 -81629317 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 879 871 244 82 4 chr13 38655480 38655735 -81628577 - B4A SINE B4 -6 286 12 2 879 236 175 254 0 chr13 38656184 38656247 -81628065 - PB1D10 SINE Alu -16 101 23 2 879 359 206 41 0 chr13 38656789 38656862 -81627450 + BC1_Mm scRNA scRNA 1 76 -76 2 879 217 302 56 44 chr13 38656862 38656879 -81627433 + B4A SINE B4 1 91 -201 2 879 277 264 52 37 chr13 38656881 38657015 -81627297 + L1MB3 LINE L1 6017 6152 -31 2 879 289 138 0 44 chr13 38658005 38658073 -81626239 + G-rich Low_complexity Low_complexity 1 65 0 2 879 459 254 8 60 chr13 38658520 38658654 -81625658 - ID_B1 SINE B4 -2 222 96 2 879 270 270 108 0 chr13 38659084 38659158 -81625154 - ID4_ SINE ID -1 82 1 2 879 315 111 0 0 chr13 38659215 38659260 -81625052 - HAL1-3A_ME LINE L1 -838 2020 1976 2 879 432 55 0 0 chr13 38659265 38659320 -81624992 + (CCTG)n Simple_repeat Simple_repeat 4 58 0 2 879 602 181 200 0 chr13 38659490 38659650 -81624662 - B3 SINE B2 -14 202 11 2 879 499 277 13 60 chr13 38660174 38660324 -81623988 + MT2A LTR ERVL 317 459 -74 2 879 592 201 174 14 chr13 38660412 38660619 -81623693 + L1MA9 LINE L1 5992 6231 -81 2 879 308 211 406 0 chr13 38660898 38661031 -81623281 + RMER15 LTR ERVL 375 561 -14 2 879 344 307 16 58 chr13 38661070 38661191 -81623121 + PB1D10 SINE Alu 2 117 0 2 879 315 0 0 0 chr13 38661993 38662028 -81622284 + (CTG)n Simple_repeat Simple_repeat 1 35 0 2 879 2855 104 9 47 chr13 38662086 38662532 -81621780 + Lx LINE L1 6210 6638 -16 2 879 189 74 0 0 chr13 38662532 38662559 -81621753 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2 879 932 230 25 0 chr13 38663094 38663294 -81621018 - B3 SINE B2 -10 206 2 2 879 470 114 13 0 chr13 38663477 38663556 -81620756 + (CA)n Simple_repeat Simple_repeat 1 80 0 2 879 351 203 0 0 chr13 38664018 38664092 -81620220 + (TA)n Simple_repeat Simple_repeat 2 75 0 2 879 857 70 86 0 chr13 38664416 38664544 -81619768 + B2_Mm1a SINE B2 41 179 -14 2 879 282 136 348 18 chr13 38664629 38664741 -81619571 + B2_Mm2 SINE B2 47 195 0 2 880 601 279 119 46 chr13 38666784 38667002 -81617310 + Tigger5 DNA MER2_type 1 234 -2172 2 880 300 200 17 0 chr13 38667006 38667066 -81617246 + Tigger5 DNA MER2_type 2293 2353 -53 2 880 387 0 0 0 chr13 38667076 38667119 -81617193 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 880 259 143 0 0 chr13 38667640 38667682 -81616630 - Lx LINE L1 -144 6510 6469 2 880 333 0 0 0 chr13 38667845 38667882 -81616430 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 2 880 353 245 78 39 chr13 38668048 38668150 -81616162 - MER2 DNA MER2_type -17 328 223 2 880 1247 93 0 27 chr13 38668136 38668160 -81616152 - B2_Mm1a SINE B2 -9 184 162 2 880 386 0 41 0 chr13 38668160 38668209 -81616103 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 2 880 1247 93 0 27 chr13 38668209 38668372 -81615940 - B2_Mm1a SINE B2 -32 161 3 2 880 494 285 91 5 chr13 38668379 38668566 -81615746 - MER2 DNA MER2_type -115 230 28 2 880 641 280 50 25 chr13 38668909 38669070 -81615242 + RSINE1 SINE B4 1 165 0 2 880 747 179 0 0 chr13 38669070 38669302 -81615010 + (CATA)n Simple_repeat Simple_repeat 1 232 0 2 880 361 54 36 0 chr13 38670386 38670442 -81613870 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 880 228 266 130 71 chr13 38670461 38670615 -81613697 - ORR1E LTR MaLR -196 163 1 2 880 399 303 0 20 chr13 38670757 38670858 -81613454 + ID_B1 SINE B4 84 182 -42 2 880 390 225 132 26 chr13 38670858 38670870 -81613442 + B1F1 SINE Alu 3 127 -22 2 880 415 239 43 0 chr13 38670899 38671006 -81613306 - Lx8 LINE L1 -449 7024 6892 2 880 1069 263 62 28 chr13 38671012 38671368 -81612944 + Lx8 LINE L1 7041 7408 -65 2 880 672 48 0 0 chr13 38671436 38671520 -81612792 + (TCCC)n Simple_repeat Simple_repeat 2 85 0 2 880 594 228 7 14 chr13 38671520 38671658 -81612654 - B1_Mur1 SINE Alu -12 137 1 2 880 22 70 0 0 chr13 38673332 38673375 -81610937 + AT_rich Low_complexity Low_complexity 1 43 0 2 880 361 314 49 8 chr13 38673395 38673517 -81610795 + B1F1 SINE Alu 1 127 -22 2 880 242 211 0 40 chr13 38673517 38673591 -81610721 + GA-rich Low_complexity Low_complexity 1 71 0 2 880 392 298 97 0 chr13 38673600 38673714 -81610598 + ID_B1 SINE B4 82 206 -18 2 880 453 116 0 0 chr13 38673718 38673787 -81610525 + (TAAA)n Simple_repeat Simple_repeat 1 69 0 2 880 248 234 20 2 chr13 38673830 38673899 -81610413 - MIR SINE MIR -127 149 79 3 880 1221 41 0 14 chr13 38675117 38675265 -81609047 + B1_Mus2 SINE Alu 1 146 -1 3 880 807 11 0 0 chr13 38675265 38675357 -81608955 + (GA)n Simple_repeat Simple_repeat 2 93 0 3 880 469 246 68 68 chr13 38675430 38675578 -81608734 + B1F SINE Alu 1 148 -1 3 880 256 315 139 0 chr13 38675653 38675761 -81608551 - MER3 DNA MER1_type -79 130 8 3 880 234 314 9 73 chr13 38676042 38676152 -81608160 - RMER4A LTR ERVK -355 111 9 3 880 648 254 28 22 chr13 38676358 38676539 -81607773 - B4 SINE B4 -5 287 106 3 880 555 56 0 0 chr13 38677046 38677117 -81607195 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 880 2971 256 117 24 chr13 38677902 38678233 -81606079 - Lx8 LINE L1 -136 7337 6945 3 880 351 0 0 0 chr13 38678233 38678272 -81606040 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 880 405 0 0 0 chr13 38678272 38678316 -81605996 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 880 2971 256 117 24 chr13 38678316 38678901 -81605411 - Lx8 LINE L1 -529 6944 6336 3 880 478 220 60 0 chr13 38679306 38679406 -81604906 - PB1D10 SINE Alu 0 117 12 3 880 248 96 39 0 chr13 38679445 38679497 -81604815 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 3 880 331 239 205 0 chr13 38679500 38679617 -81604695 - B1F SINE Alu 0 149 9 3 880 4327 140 100 31 chr13 38680036 38680264 -81604048 - RMER13A LTR ERVK -7 853 555 3 880 194 0 39 0 chr13 38680264 38680290 -81604022 + (TGGGGG)n Simple_repeat Simple_repeat 1 27 0 3 880 4327 140 100 31 chr13 38680290 38680859 -81603453 - RMER13A LTR ERVK -306 554 1 3 880 453 138 0 0 chr13 38680966 38681046 -81603266 + (GGA)n Simple_repeat Simple_repeat 3 82 0 3 880 180 0 0 0 chr13 38681395 38681415 -81602897 + (A)n Simple_repeat Simple_repeat 1 20 0 3 880 260 300 0 0 chr13 38682600 38682670 -81601642 - ID4 SINE ID -9 74 5 3 880 305 290 90 36 chr13 38682674 38682785 -81601527 - PB1D10 SINE Alu 0 117 1 3 880 243 0 0 0 chr13 38682924 38682951 -81601361 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 880 980 229 24 19 chr13 38682951 38683156 -81601156 + ID_B1 SINE B4 12 217 -7 3 880 186 43 0 0 chr13 38683160 38683183 -81601129 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 3 880 1444 149 19 9 chr13 38683681 38683967 -81600345 + ORR1A2 LTR MaLR 58 338 -8 3 880 257 206 382 0 chr13 38684247 38684315 -81599997 + B1_Mus1 SINE Alu 10 103 -45 3 880 986 280 86 42 chr13 38684318 38684679 -81599633 - MTE2b LTR MaLR 0 379 3 3 880 532 265 31 75 chr13 38685971 38686184 -81598128 - MIR SINE MIR -46 216 20 3 880 227 379 0 0 chr13 38686634 38686737 -81597575 + (TCCA)n Simple_repeat Simple_repeat 2 104 0 3 880 221 268 149 11 chr13 38686770 38686857 -81597455 - L2a LINE L2 -50 3376 3278 3 880 1887 132 146 9 chr13 38687731 38688067 -81596245 - RLTR14 LTR ERV1 0 382 1 3 880 288 0 0 0 chr13 38688158 38688190 -81596122 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 880 333 0 0 0 chr13 38688190 38688226 -81596086 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 880 586 303 15 0 chr13 38689157 38689289 -81595023 + ID_B1 SINE B4 82 215 -9 3 880 1277 194 121 59 chr13 38689294 38689682 -81594630 + Lx9 LINE L1 7233 7644 0 3 880 948 138 16 21 chr13 38689858 38690041 -81594271 + B3 SINE B2 2 181 -14 3 880 1106 72 0 0 chr13 38690187 38690325 -81593987 + B1_Mus1 SINE Alu 2 139 -9 3 880 296 262 68 15 chr13 38690331 38690412 -81593900 + ID4_ SINE ID 4 91 -61 3 880 731 239 6 12 chr13 38690775 38690936 -81593376 - RSINE1 SINE B4 -4 161 2 3 880 408 265 41 0 chr13 38691119 38691217 -81593095 + MTE2a LTR MaLR 278 379 0 3 880 618 278 91 14 chr13 38691270 38691478 -81592834 + ID_B1 SINE B4 1 224 0 3 880 217 95 0 45 chr13 38691486 38691530 -81592782 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 3 880 396 272 107 13 chr13 38691761 38691910 -81592402 - RSINE1 SINE B4 0 165 3 3 880 475 176 33 56 chr13 38693157 38693247 -81591065 + RSINE1 SINE B4 54 141 -24 3 880 309 262 0 24 chr13 38693266 38693348 -81590964 + L1M4c LINE L1 2327 2406 -3978 3 880 1009 232 171 4 chr13 38696444 38696725 -81587587 + Lx9 LINE L1 6460 6787 -857 3 880 1565 243 203 16 chr13 38696731 38697313 -81586999 + Lx9 LINE L1 6946 7636 -8 3 880 614 13 13 0 chr13 38697704 38697779 -81586533 + (GA)n Simple_repeat Simple_repeat 2 77 0 3 880 231 36 0 0 chr13 38698087 38698115 -81586197 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 3 880 320 316 154 27 chr13 38698383 38698604 -81585708 + MIRb SINE MIR 19 267 -1 3 880 195 42 0 0 chr13 38698824 38698848 -81585464 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 880 234 260 40 30 chr13 38698850 38698949 -81585363 - B3A SINE B2 -72 126 27 3 880 604 242 20 67 chr13 38698962 38699215 -81585097 - B3A SINE B2 0 216 1 3 880 609 301 27 0 chr13 38699863 38700049 -81584263 + L1MB3 LINE L1 5594 5784 -399 3 880 335 306 28 118 chr13 38700213 38700296 -81584016 + ID SINE ID 10 76 -148 3 880 226 314 16 146 chr13 38700296 38700419 -81583893 + B1F1 SINE Alu 1 107 -42 3 880 371 234 81 0 chr13 38700430 38700541 -81583771 + L1MB3 LINE L1 5918 6037 -146 3 880 213 185 30 15 chr13 38701950 38702016 -81582296 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 880 338 311 9 9 chr13 38702408 38702515 -81581797 + ID_B1 SINE B4 117 223 -1 3 880 562 302 32 51 chr13 38703773 38703989 -81580323 + B4A SINE B4 71 282 -10 3 880 315 0 0 0 chr13 38704011 38704046 -81580266 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 880 1118 182 54 0 chr13 38704179 38704382 -81579930 - B3 SINE B2 -2 214 1 3 880 228 322 57 45 chr13 38705415 38705608 -81578704 + L2a LINE L2 2931 3116 -259 3 880 198 267 25 51 chr13 38705709 38705788 -81578524 + L2a LINE L2 3252 3328 -47 3 880 341 262 23 23 chr13 38705819 38705905 -81578407 + B1F SINE Alu 56 141 -8 3 880 253 241 29 147 chr13 38706309 38706479 -81577833 - L3 LINE CR1 -1649 2840 2691 3 880 2949 205 63 3 chr13 38706563 38707195 -81577117 - Lx9 LINE L1 -22 7622 6953 3 880 243 0 0 0 chr13 38707373 38707400 -81576912 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 880 583 198 19 0 chr13 38707418 38707524 -81576788 - RSINE1 SINE B4 -41 124 17 3 880 378 237 10 31 chr13 38707750 38707846 -81576466 - ID_B1 SINE B4 -16 208 115 3 880 216 274 68 0 chr13 38707783 38707856 -81576456 - PB1D7 SINE Alu -23 97 20 3 880 807 282 79 20 chr13 38709250 38709503 -81574809 + B4 SINE B4 15 282 -10 3 880 477 84 0 0 chr13 38709513 38709584 -81574728 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 880 23 54 0 0 chr13 38710691 38710728 -81573584 + AT_rich Low_complexity Low_complexity 1 37 0 3 880 460 227 0 0 chr13 38711901 38711989 -81572323 - PB1D10 SINE Alu -23 94 7 3 880 432 0 0 0 chr13 38712289 38712337 -81571975 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 880 807 261 10 21 chr13 38712438 38712630 -81571682 + B3A SINE B2 4 193 -5 3 880 213 39 0 0 chr13 38712707 38712733 -81571579 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 3 880 1339 80 6 6 chr13 38712735 38712911 -81571401 - B2_Mm2 SINE B2 -18 177 2 3 880 413 224 74 9 chr13 38712932 38713040 -81571272 - Tigger5 DNA MER2_type 0 2406 2292 3 880 767 279 0 6 chr13 38713264 38713444 -81570868 - B3A SINE B2 -18 180 2 3 880 207 0 0 0 chr13 38713787 38713810 -81570502 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 3 880 261 68 21 83 chr13 38713983 38714031 -81570281 + B1_Mm SINE Alu 102 146 -1 3 880 826 154 73 0 chr13 38714065 38714201 -81570111 + B1_Mus2 SINE Alu 1 146 -1 3 880 180 0 0 0 chr13 38714220 38714240 -81570072 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 880 588 234 11 4 chr13 38714261 38714395 -81569917 - RSINE1 SINE B4 -29 136 2 3 880 261 307 0 0 chr13 38714576 38714651 -81569661 - L1M7 LINE L1 -4777 1441 1367 3 880 814 172 15 15 chr13 38715007 38715143 -81569169 + B1_Mus1 SINE Alu 3 138 -10 3 880 243 0 0 0 chr13 38715143 38715170 -81569142 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 880 251 191 0 16 chr13 38715983 38716047 -81568265 + CT-rich Low_complexity Low_complexity 2 64 0 3 880 689 279 0 7 chr13 38716053 38716201 -81568111 - ID_B1 SINE B4 0 224 78 3 880 362 269 287 0 chr13 38716221 38716388 -81567924 - ID_B1 SINE B4 -8 216 2 3 880 326 295 25 35 chr13 38716960 38717079 -81567233 - PB1D10 SINE Alu 0 117 2 3 880 249 280 153 46 chr13 38717572 38717703 -81566609 + MLT1J LTR MaLR 364 508 -4 3 880 820 252 47 24 chr13 38718331 38718542 -81565770 - B3 SINE B2 0 216 1 3 880 250 290 138 11 chr13 38718775 38718869 -81565443 - RSINE1 SINE B4 -57 108 3 3 880 542 169 184 8 chr13 38718905 38719030 -81565282 + B1_Mur3 SINE Alu 3 149 0 3 880 224 263 35 0 chr13 38719032 38719089 -81565223 + GA-rich Low_complexity Low_complexity 2 60 0 3 880 557 311 24 5 chr13 38719152 38719359 -81564953 + B3 SINE B2 1 211 -5 3 880 358 274 49 0 chr13 38719392 38719494 -81564818 + U6 snRNA snRNA 1 107 0 3 880 239 292 41 10 chr13 38719976 38720073 -81564239 - B1_Mus1 SINE Alu -24 124 25 3 880 231 244 169 40 chr13 38720169 38720293 -81564019 - MIR SINE MIR -115 147 8 3 880 233 240 18 135 chr13 38721179 38721271 -81563041 + MTEa-int LTR MaLR 1823 1901 -62 3 880 543 211 64 0 chr13 38721271 38721380 -81562932 + B1_Mur2 SINE Alu 2 117 -32 3 880 402 313 85 21 chr13 38721608 38721911 -81562401 + MTEa LTR MaLR 47 379 0 3 880 360 94 0 0 chr13 38723782 38723835 -81560477 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 880 237 284 13 26 chr13 38725251 38725327 -81558985 + ID4 SINE ID 1 75 -8 4 880 558 43 0 0 chr13 38725457 38725526 -81558786 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 880 379 248 234 20 chr13 38725564 38725934 -81558378 + L1MB3 LINE L1 5260 5714 -469 4 880 301 207 134 0 chr13 38725990 38726072 -81558240 + L1MB3 LINE L1 5999 6091 -92 4 880 221 276 143 14 chr13 38727213 38727344 -81556968 - MIRc SINE MIR -28 240 100 4 880 395 281 79 58 chr13 38729012 38729334 -81554978 + MLT1H LTR MaLR 59 353 -226 4 880 346 39 39 0 chr13 38729428 38729480 -81554832 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 880 576 0 0 0 chr13 38729480 38729543 -81554769 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 880 775 189 0 10 chr13 38729732 38729888 -81554424 + B3 SINE B2 1 145 -50 4 880 234 346 86 7 chr13 38730258 38730402 -81553910 - MIR SINE MIR -8 254 104 4 880 192 333 87 35 chr13 38730569 38730684 -81553628 - L2b LINE L2 -11 3364 3244 4 880 546 16 0 0 chr13 38731033 38731096 -81553216 + (TA)n Simple_repeat Simple_repeat 1 63 0 4 880 446 292 19 0 chr13 38731954 38732060 -81552252 + ORR1E LTR MaLR 26 133 -226 4 880 435 161 0 12 chr13 38732078 38732160 -81552152 + ORR1E LTR MaLR 306 386 -8 4 880 300 290 44 37 chr13 38732228 38732364 -81551948 + ORR1E LTR MaLR 24 160 -199 4 880 326 242 0 0 chr13 38732557 38732619 -81551693 + Tigger7 DNA MER2_type 2420 2481 -10 4 880 203 138 0 0 chr13 38733865 38733894 -81550418 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 4 880 309 304 19 19 chr13 38734280 38734384 -81549928 + MER44B DNA MER2_type 2 105 -445 4 880 414 285 320 33 chr13 38735502 38735778 -81548534 + MER44B DNA MER2_type 190 544 -6 4 880 397 206 14 0 chr13 38737033 38737106 -81547206 - ID4_ SINE ID -8 75 2 4 880 1323 83 27 22 chr13 38739556 38739741 -81544571 - B2_Mm2 SINE B2 -8 187 2 4 880 983 24 8 0 chr13 38740036 38740161 -81544151 + B1_Mus1 SINE Alu 22 147 -1 4 880 735 12 0 0 chr13 38740431 38740515 -81543797 + (TG)n Simple_repeat Simple_repeat 2 85 0 4 880 685 190 73 0 chr13 38741998 38742135 -81542177 + B1_Mus1 SINE Alu 1 147 -1 4 880 544 248 0 0 chr13 38743577 38743686 -81540626 - B1F1 SINE Alu -40 109 1 4 880 369 0 0 0 chr13 38743859 38743900 -81540412 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 880 1361 60 49 0 chr13 38744914 38745097 -81539215 - B2_Mm2 SINE B2 -2 193 2 4 880 530 56 14 0 chr13 38745464 38745536 -81538776 + RMER6D LTR ERVK 1 73 -647 4 880 1352 168 105 40 chr13 38745575 38746015 -81538297 + RMER6A LTR ERVK 282 671 -85 4 880 738 191 79 0 chr13 38746039 38746191 -81538121 + RMER6D LTR ERVK 557 720 0 4 880 216 231 0 58 chr13 38747086 38747155 -81537157 + PB1D7 SINE Alu 1 65 -55 4 880 822 249 67 8 chr13 38747325 38747580 -81536732 + B4A SINE B4 3 272 -20 4 880 462 65 0 0 chr13 38747594 38747656 -81536656 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 880 228 200 11 23 chr13 38747713 38747800 -81536512 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 880 398 137 0 2 chr13 38748942 38749009 -81535303 + B1_Mur2 SINE Alu 75 142 -7 4 880 551 172 0 0 chr13 38749064 38749157 -81535155 + B3 SINE B2 9 101 -115 4 880 180 0 0 0 chr13 38749312 38749332 -81534980 + (TGG)n Simple_repeat Simple_repeat 1 20 0 4 880 284 260 0 0 chr13 38749334 38749411 -81534901 - PB1D7 SINE Alu -12 108 32 4 880 180 0 0 0 chr13 38750168 38750188 -81534124 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 4 880 1170 75 7 0 chr13 38751128 38751275 -81533037 - B1_Mus1 SINE Alu 0 148 1 4 880 1100 43 0 42 chr13 38751514 38751658 -81532654 + B1_Mus2 SINE Alu 1 138 -9 4 880 1628 197 31 14 chr13 38751683 38752033 -81532279 + ORR1B2 LTR MaLR 12 367 0 4 880 3887 221 50 25 chr13 38752101 38752162 -81532150 + ORR1B2-int LTR MaLR 1 61 -1309 4 880 1781 115 55 22 chr13 38752162 38752474 -81531838 + RLTRETN_Mm LTR ERVK 1 322 0 4 880 3887 221 50 25 chr13 38752474 38752711 -81531601 + ORR1B2-int LTR MaLR 62 295 -1075 4 880 225 83 0 0 chr13 38752711 38752747 -81531565 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 880 3887 223 50 25 chr13 38752747 38753477 -81530835 + ORR1B2-int LTR MaLR 296 1726 -237 4 880 2182 114 49 0 chr13 38753477 38753827 -81530485 + ORR1B2 LTR MaLR 1 367 0 4 880 1278 237 41 13 chr13 38753827 38754141 -81530171 + ORR1C2-int LTR MaLR 1048 1370 0 4 880 382 168 108 10 chr13 38754141 38754243 -81530069 + ORR1C2 LTR MaLR 1 112 -272 4 880 308 183 0 0 chr13 38754238 38754298 -81530014 - ORR1A4 LTR MaLR -5 324 265 4 880 2309 68 180 2 chr13 38754314 38754725 -81529587 - RLTR47_MM LTR ERV1 -48 484 1 4 880 1255 162 81 4 chr13 38754725 38754973 -81529339 - ORR1B1 LTR MaLR -52 342 76 4 880 317 71 57 0 chr13 38754973 38755043 -81529269 + (TTTTTG)n Simple_repeat Simple_repeat 4 77 0 4 880 1191 48 14 0 chr13 38755045 38755191 -81529121 - B1_Mus1 SINE Alu 0 148 1 4 880 543 156 0 0 chr13 38755191 38755281 -81529031 - ORR1B1 LTR MaLR -304 90 1 4 880 1017 154 61 157 chr13 38755281 38755543 -81528769 + ORR1C2 LTR MaLR 104 340 -44 4 880 293 263 29 78 chr13 38755559 38755662 -81528650 + RSINE1 SINE B4 67 164 -1 4 880 301 295 70 39 chr13 38755701 38755930 -81528382 + L1M5 LINE L1 3744 3979 -2167 4 880 488 277 38 23 chr13 38755933 38756066 -81528246 + RSINE1 SINE B4 12 146 -19 4 880 260 296 14 0 chr13 38756611 38756682 -81527630 - ID4 SINE ID -10 73 2 4 880 502 301 15 15 chr13 38756733 38756868 -81527444 - RSINE1 SINE B4 -6 159 25 4 880 2916 73 55 12 chr13 38756889 38757293 -81527019 + BGLII LTR ERVK 1 421 0 4 880 426 196 0 0 chr13 38757316 38757413 -81526899 + (TG)n Simple_repeat Simple_repeat 2 98 0 4 880 645 221 83 14 chr13 38757416 38757606 -81526706 - B3A SINE B2 -15 201 3 4 880 345 291 101 22 chr13 38757824 38758003 -81526309 + B4A SINE B4 2 194 -98 4 880 22 56 0 0 chr13 38758217 38758253 -81526059 + AT_rich Low_complexity Low_complexity 1 36 0 4 880 356 236 59 103 chr13 38759021 38759038 -81525274 - B2_Mm2 SINE B2 0 195 183 4 880 4301 55 23 0 chr13 38759038 38759564 -81524748 - L1_Mus1 LINE L1 0 6567 6030 4 880 518 218 148 47 chr13 38759564 38759749 -81524563 - B3A SINE B2 0 198 2 4 880 419 298 23 40 chr13 38760097 38760272 -81524040 + L1MC4 LINE L1 6702 6873 -1169 4 880 633 312 65 89 chr13 38760384 38760813 -81523499 + MT2A LTR ERVL 1 419 -114 4 880 187 193 24 0 chr13 38760841 38760924 -81523388 + (TA)n Simple_repeat Simple_repeat 2 86 0 4 880 1147 75 0 0 chr13 38760933 38761080 -81523232 - B1_Mus1 SINE Alu 0 148 2 4 880 347 60 0 20 chr13 38761100 38761151 -81523161 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 4 880 281 89 22 0 chr13 38761152 38761197 -81523115 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 880 614 256 44 25 chr13 38761203 38761363 -81522949 - RSINE1 SINE B4 0 165 3 4 880 1266 104 16 0 chr13 38761494 38761676 -81522636 - B2_Mm1t SINE B2 -8 185 1 4 880 1910 233 92 38 chr13 38761706 38761971 -81522341 - Lx7 LINE L1 0 7696 7319 4 880 252 86 0 0 chr13 38761971 38762006 -81522306 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 880 1910 220 36 51 chr13 38762006 38762434 -81521878 - Lx7 LINE L1 -378 7318 6878 4 880 2148 164 5 19 chr13 38762652 38763024 -81521288 + ORR1B2 LTR MaLR 1 367 0 4 880 2032 165 200 6 chr13 38763108 38763597 -81520715 + RLTR31A_Mm LTR ERVK 1 584 0 4 880 339 25 0 0 chr13 38763652 38763692 -81520620 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 880 186 290 0 0 chr13 38764642 38764704 -81519608 - L2a LINE L2 -22 3404 3343 4 880 336 318 11 0 chr13 38764965 38765053 -81519259 - PB1D10 SINE Alu -19 98 10 4 880 675 83 25 0 chr13 38765055 38765176 -81519136 + (TCTA)n Simple_repeat Simple_repeat 2 125 0 4 880 1229 48 0 0 chr13 38765194 38765341 -81518971 - B1_Mm SINE Alu 0 147 1 4 880 614 168 32 8 chr13 38765341 38765467 -81518845 - RMER16 LTR ERVK -404 129 1 4 880 231 319 12 60 chr13 38765991 38766158 -81518154 + CT-rich Low_complexity Low_complexity 3 161 0 4 880 1516 45 0 11 chr13 38766580 38766760 -81517552 + B2_Mm1a SINE B2 2 179 -14 4 880 228 67 0 0 chr13 38767048 38767078 -81517234 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 4 880 612 129 108 108 chr13 38767080 38767228 -81517084 - B1_Mur4 SINE Alu -1 149 2 4 880 205 205 35 93 chr13 38767236 38767322 -81516990 - MIR SINE MIR -107 155 75 4 880 305 311 19 28 chr13 38767355 38767461 -81516851 + RSINE1 SINE B4 1 105 -60 4 880 454 31 31 0 chr13 38768690 38768754 -81515558 + (CATA)n Simple_repeat Simple_repeat 3 68 0 4 880 21 0 0 0 chr13 38768811 38768832 -81515480 + AT_rich Low_complexity Low_complexity 1 21 0 4 880 1166 69 81 6 chr13 38769884 38770058 -81514254 - B2_Mm1a SINE B2 -6 187 1 4 880 180 0 0 0 chr13 38770060 38770080 -81514232 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 880 1058 108 6 0 chr13 38770083 38770240 -81514072 - B2_Mm1a SINE B2 -35 158 1 4 880 6639 138 22 8 chr13 38770988 38772035 -81512277 + Lx LINE L1 5465 6518 -136 4 880 243 0 0 0 chr13 38772035 38772062 -81512250 + (TGGG)n Simple_repeat Simple_repeat 3 29 0 4 880 6639 139 29 11 chr13 38772062 38772185 -81512127 + Lx LINE L1 6519 6653 -1 4 880 929 141 228 0 chr13 38772490 38772674 -81511638 - URR1A DNA MER1_type 0 226 1 4 880 359 356 47 28 chr13 38774415 38774629 -81509683 - MLT1F-int LTR MaLR -102 1387 1170 4 880 1049 294 73 14 chr13 38775031 38775099 -81509213 - MTEa LTR MaLR -2 377 313 4 880 423 0 0 0 chr13 38775099 38775146 -81509166 + (GGGA)n Simple_repeat Simple_repeat 1 47 0 4 880 1049 294 73 14 chr13 38775146 38775432 -81508880 - MTEa LTR MaLR -67 312 2 4 880 645 226 0 31 chr13 38775709 38775837 -81508475 + RSINE1 SINE B4 3 126 -39 4 880 459 103 22 22 chr13 38775841 38775930 -81508382 + (TCCCC)n Simple_repeat Simple_repeat 1 89 0 4 880 541 192 132 0 chr13 38775933 38776084 -81508228 + ORR1D1 LTR MaLR 157 327 -47 4 880 386 245 179 54 chr13 38776083 38776251 -81508061 + B4A SINE B4 45 233 -59 4 880 1288 148 0 17 chr13 38776421 38776638 -81507674 + L1_Mur1 LINE L1 4969 5183 -703 4 880 2881 95 28 5 chr13 38776638 38777070 -81507242 + L1_Mus4 LINE L1 6194 6635 -1 5 880 1288 148 0 17 chr13 38777070 38777086 -81507226 + L1_Mur1 LINE L1 5184 5198 -688 4 880 686 128 8 0 chr13 38777103 38777220 -81507092 + (TCCC)n Simple_repeat Simple_repeat 1 118 0 5 880 868 155 13 33 chr13 38777221 38777374 -81506938 - B1_Mur4 SINE Alu 0 150 1 5 880 1079 220 33 5 chr13 38777416 38777626 -81506686 - B3 SINE B2 0 216 1 5 880 770 319 69 2 chr13 38777894 38778300 -81506012 - L1ME1 LINE L1 -1 6178 5746 5 880 715 264 130 27 chr13 38778469 38778761 -81505551 - MER2 DNA MER2_type -1 344 23 5 880 1200 247 101 16 chr13 38779230 38779525 -81504787 - MTD LTR MaLR 0 419 93 5 880 1109 198 238 35 chr13 38779525 38779686 -81504626 + ORR1C2 LTR MaLR 1 215 -169 5 880 378 0 0 0 chr13 38779686 38779728 -81504584 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 880 1109 198 238 35 chr13 38779728 38779885 -81504427 + ORR1C2 LTR MaLR 216 383 -1 5 880 1200 247 101 16 chr13 38779885 38779975 -81504337 - MTD LTR MaLR -327 92 2 5 880 789 240 40 11 chr13 38780191 38780368 -81503944 + B3A SINE B2 1 182 -16 5 880 468 0 0 0 chr13 38780379 38780431 -81503881 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 880 431 264 54 8 chr13 38781116 38781246 -81503066 - ID_B1 SINE B4 -7 217 82 5 880 315 286 44 0 chr13 38781509 38781600 -81502712 - Arthur1C DNA Tip100 -16 347 253 5 880 22 0 0 0 chr13 38782123 38782145 -81502167 + AT_rich Low_complexity Low_complexity 1 22 0 5 880 891 263 107 27 chr13 38782911 38783239 -81501073 - MLT1B LTR MaLR -16 374 21 5 880 369 222 99 33 chr13 38783449 38783570 -81500742 + MTEb LTR MaLR 249 377 -2 5 880 1033 121 79 0 chr13 38784073 38784238 -81500074 + B2_Mm1t SINE B2 2 179 -14 5 880 328 127 0 35 chr13 38784271 38784328 -81499984 + B2_Mm2 SINE B2 47 101 -94 5 880 23 54 0 0 chr13 38784354 38784391 -81499921 + AT_rich Low_complexity Low_complexity 1 37 0 5 880 549 109 21 11 chr13 38784478 38784571 -81499741 - B1_Mus2 SINE Alu -1 146 53 5 880 809 263 87 73 chr13 38784724 38785011 -81499301 - B4A SINE B4 0 292 2 5 880 396 103 0 0 chr13 38785050 38785108 -81499204 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 880 297 333 170 31 chr13 38785625 38786112 -81498200 + Kanga1b DNA Tc2 195 749 -30 5 880 219 191 27 68 chr13 38788349 38788422 -81495890 - MIRc SINE MIR -114 154 85 5 880 252 0 0 0 chr13 38788897 38788925 -81495387 + (T)n Simple_repeat Simple_repeat 1 28 0 5 880 195 170 0 0 chr13 38789702 38789749 -81494563 + CT-rich Low_complexity Low_complexity 2 48 0 5 880 809 261 75 46 chr13 38789773 38790054 -81494258 - B4A SINE B4 -3 289 1 5 880 333 320 29 0 chr13 38790076 38790179 -81494133 - PB1D10 SINE Alu -11 106 1 5 880 255 306 35 65 chr13 38790333 38790532 -81493780 - MamGypLTR2c LTR Gypsy -41 1027 835 5 880 5025 162 45 16 chr13 38790644 38791523 -81492789 + RMER13B LTR ERVK 1 905 -3 5 880 230 217 60 0 chr13 38792220 38792303 -81492009 + (TA)n Simple_repeat Simple_repeat 2 89 0 5 880 1138 319 91 63 chr13 38792317 38792902 -81491410 - Tigger7 DNA MER2_type -102 603 3 5 880 265 311 29 10 chr13 38793150 38793254 -81491058 - PB1D10 SINE Alu -7 110 5 5 880 518 319 24 6 chr13 38793164 38793331 -81490981 - ID_B1 SINE B4 -49 175 6 5 880 195 42 0 0 chr13 38793554 38793578 -81490734 + (GGA)n Simple_repeat Simple_repeat 3 26 0 5 880 295 333 89 84 chr13 38793578 38793791 -81490521 - MTEa LTR MaLR -163 216 3 5 880 317 184 25 62 chr13 38794032 38794113 -81490199 - RCHARR1 DNA MER1_type -6 968 891 5 880 1528 249 43 31 chr13 38795957 38796371 -81487941 + MTD LTR MaLR 1 419 0 5 880 301 279 45 9 chr13 38796384 38796496 -81487816 + B1F1 SINE Alu 33 148 -1 5 880 812 132 6 100 chr13 38796868 38797028 -81487284 - B1_Mur3 SINE Alu -3 146 2 5 881 356 185 17 69 chr13 38797608 38797724 -81486588 + RMER15 LTR ERVL 426 535 -40 5 881 347 267 0 28 chr13 38799074 38799182 -81485130 + MLT1A1 LTR MaLR 303 407 -1 5 881 405 188 0 0 chr13 38799946 38800026 -81484286 + CT-rich Low_complexity Low_complexity 1 80 0 5 881 1163 88 6 0 chr13 38800028 38800198 -81484114 + (TTTC)n Simple_repeat Simple_repeat 4 174 0 5 881 240 35 0 0 chr13 38800859 38800888 -81483424 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 881 702 247 58 0 chr13 38800892 38801066 -81483246 - B3 SINE B2 -31 185 2 5 881 534 286 31 69 chr13 38801422 38801586 -81482726 - B3A SINE B2 -16 182 26 5 881 4446 20 0 0 chr13 38801586 38802079 -81482233 + MT2_Mm LTR ERVL 1 493 0 5 881 522 286 32 69 chr13 38802079 38802104 -81482208 - B3 SINE B2 -191 25 2 5 881 1461 204 88 28 chr13 38802304 38802657 -81481655 - ORR1D1 LTR MaLR 0 374 1 5 881 909 306 85 30 chr13 38803023 38803457 -81480855 + MLT1C LTR MaLR 1 458 -9 5 881 252 0 0 0 chr13 38803706 38803734 -81480578 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 881 818 290 113 44 chr13 38803794 38804227 -81480085 + RMER13A LTR ERVK 3 465 -395 5 881 264 311 77 11 chr13 38804244 38804335 -81479977 + RMER13A LTR ERVK 585 681 -227 5 881 321 235 0 1 chr13 38804470 38804548 -81479764 - B3 SINE B2 -111 84 8 5 881 381 245 93 19 chr13 38804560 38804668 -81479644 - PB1D10 SINE Alu 0 117 2 5 881 533 294 123 31 chr13 38804869 38805048 -81479264 - B4 SINE B4 -4 288 96 5 881 363 44 0 0 chr13 38805048 38805093 -81479219 + (TTA)n Simple_repeat Simple_repeat 1 45 0 5 881 533 294 123 31 chr13 38805093 38805173 -81479139 - B4 SINE B4 -197 95 5 5 881 213 39 0 0 chr13 38805959 38805985 -81478327 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 881 1910 104 47 0 chr13 38806087 38806385 -81477927 + ORR1A2 LTR MaLR 1 312 -15 5 881 888 60 0 0 chr13 38806380 38806497 -81477815 - B1_Mm SINE Alu -30 117 1 5 881 247 196 0 0 chr13 38806467 38806513 -81477799 - MT2B2 LTR ERVL -297 287 242 5 881 241 260 50 50 chr13 38806530 38806631 -81477681 - L1MD2 LINE L1 -241 6118 6018 5 881 731 322 98 51 chr13 38807032 38807658 -81476654 - L1MB3 LINE L1 -44 6139 5476 5 881 483 271 0 30 chr13 38807689 38807822 -81476490 + RSINE1 SINE B4 2 130 -35 5 881 234 91 0 0 chr13 38807828 38807861 -81476451 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 5 881 339 280 25 0 chr13 38807863 38807981 -81476331 - L1M4c LINE L1 -712 5702 5582 5 881 379 301 133 3 chr13 38808080 38808447 -81475865 - L1M4c LINE L1 -2648 3734 3320 5 881 7714 54 0 0 chr13 38808466 38809619 -81474693 - L1Md_F2 LINE L1 -509 6073 4921 5 881 3598 84 0 0 chr13 38809619 38810081 -81474231 + L1_Mus1 LINE L1 6106 6567 0 5 881 291 320 52 17 chr13 38810176 38810348 -81473964 - L1M2 LINE L1 -3192 2951 2774 5 881 445 266 9 0 chr13 38810356 38810469 -81473843 - ID_B1 SINE B4 -1 223 110 5 881 289 316 120 0 chr13 38810357 38810490 -81473822 - B1F SINE Alu 0 149 1 5 881 394 259 125 16 chr13 38810517 38810709 -81473603 - L1M4c LINE L1 -3405 2977 2765 5 881 646 280 34 24 chr13 38810832 38811125 -81473187 - L1M4c LINE L1 -4013 2371 2076 5 881 619 296 140 50 chr13 38811306 38812150 -81472162 - L1M4c LINE L1 -4623 1761 842 5 881 811 316 39 39 chr13 38812860 38813324 -81470988 - L1MA4 LINE L1 -6 6294 5831 5 881 23 0 0 0 chr13 38813428 38813451 -81470861 + AT_rich Low_complexity Low_complexity 1 23 0 5 881 589 284 5 69 chr13 38813836 38814040 -81470272 - B3A SINE B2 -6 192 2 5 881 257 182 0 0 chr13 38815574 38815618 -81468694 - B1F2 SINE Alu -104 45 2 5 881 204 344 93 8 chr13 38815627 38815756 -81468556 - MIRb SINE MIR -110 158 19 5 881 3452 27 10 0 chr13 38816476 38816882 -81467430 - L1Md_F2 LINE L1 -2 6580 6171 5 881 191 304 0 0 chr13 38817329 38817375 -81466937 - MIR SINE MIR -14 248 203 5 881 198 103 0 0 chr13 38817923 38817952 -81466360 + (CCA)n Simple_repeat Simple_repeat 3 31 0 5 881 222 171 0 0 chr13 38817946 38817987 -81466325 + (TTA)n Simple_repeat Simple_repeat 1 41 0 5 881 231 258 43 43 chr13 38817987 38818056 -81466256 - ID4 SINE ID -14 69 1 5 881 248 197 16 16 chr13 38818469 38818531 -81465781 - MLT1C LTR MaLR -2 503 442 5 881 281 303 45 84 chr13 38818626 38818781 -81465531 - MLT1C LTR MaLR -52 415 267 5 881 180 0 0 0 chr13 38819690 38819710 -81464602 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 881 252 0 0 0 chr13 38819710 38819737 -81464575 + (TC)n Simple_repeat Simple_repeat 2 29 0 5 881 587 275 135 48 chr13 38822366 38822721 -81461591 + LTR80B LTR ERVL 93 478 -106 5 881 312 327 31 76 chr13 38822919 38823210 -81461102 - L2a LINE L2 -17 3409 3132 5 881 772 239 168 47 chr13 38823471 38823510 -81460802 - Lx8 LINE L1 -1 7472 7443 5 881 874 202 61 51 chr13 38823510 38823724 -81460588 - B3 SINE B2 0 216 1 5 881 772 239 168 47 chr13 38823724 38823982 -81460330 - Lx8 LINE L1 -31 7442 7139 5 881 486 0 0 0 chr13 38824288 38824342 -81459970 + (TTTTA)n Simple_repeat Simple_repeat 4 57 0 5 881 606 182 132 0 chr13 38824342 38824463 -81459849 - B1_Mur4 SINE Alu -12 138 2 5 881 886 274 50 50 chr13 38824494 38824729 -81459583 - B4A SINE B4 -14 278 43 5 881 4111 178 51 33 chr13 38824729 38825574 -81458738 - RMER13A LTR ERVK 0 860 1 5 881 886 274 50 50 chr13 38825574 38825615 -81458697 - B4A SINE B4 -250 42 2 5 881 205 254 15 45 chr13 38825986 38826052 -81458260 - MER5B DNA MER1_type -61 117 54 5 881 399 296 55 22 chr13 38826139 38826322 -81457990 - MER53 DNA hAT -3 190 2 5 881 200 140 80 0 chr13 38826493 38826543 -81457769 + (CAAT)n Simple_repeat Simple_repeat 4 57 0 5 881 381 339 122 14 chr13 38827171 38827392 -81456920 - ORR1E LTR MaLR -113 246 2 5 881 289 335 83 24 chr13 38827531 38827699 -81456613 - MIRc SINE MIR -65 203 26 5 881 266 0 0 29 chr13 38827919 38827954 -81456358 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 881 330 290 10 10 chr13 38827958 38828059 -81456253 - PB1D10 SINE Alu 0 117 17 5 881 279 0 0 0 chr13 38828735 38828766 -81455546 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 881 1175 112 0 6 chr13 38828857 38829037 -81455275 + B2_Mm2 SINE B2 3 181 -14 5 881 189 337 31 104 chr13 38829058 38829250 -81455062 - L2b LINE L2 -85 3290 3113 6 881 234 0 0 0 chr13 38830151 38830177 -81454135 + (T)n Simple_repeat Simple_repeat 1 26 0 6 881 348 200 0 0 chr13 38831103 38831178 -81453134 + CT-rich Low_complexity Low_complexity 3 77 0 6 881 749 224 14 0 chr13 38831179 38831326 -81452986 - B1_Mur1 SINE Alu 0 149 1 6 881 415 161 0 65 chr13 38833458 38833551 -81450761 + B4 SINE B4 1 87 -205 6 881 558 307 6 0 chr13 38833679 38833845 -81450467 + B4A SINE B4 126 292 0 6 881 349 293 0 10 chr13 38834071 38834171 -81450141 - PB1D7 SINE Alu 0 120 22 6 881 418 228 12 23 chr13 38834695 38834866 -81449446 + CT-rich Low_complexity Low_complexity 2 170 0 6 881 341 117 17 0 chr13 38834878 38834938 -81449374 + (CAT)n Simple_repeat Simple_repeat 3 63 0 6 881 262 295 0 0 chr13 38834954 38835015 -81449297 - PB1D10 SINE Alu -42 75 15 6 881 3319 167 63 94 chr13 38835177 38835513 -81448799 + RLTR40 LTR ERVK 1 376 -441 6 881 1666 161 100 7 chr13 38835513 38835814 -81448498 + ORR1A4 LTR MaLR 1 329 0 6 881 3319 167 63 94 chr13 38835814 38836302 -81448010 + RLTR40 LTR ERVK 377 799 -18 6 881 708 286 75 12 chr13 38836319 38836560 -81447752 - MTE2b LTR MaLR -92 287 32 6 881 426 341 117 30 chr13 38836623 38836853 -81447459 + B4A SINE B4 41 290 -2 6 881 207 222 22 0 chr13 38836875 38836920 -81447392 + (CATA)n Simple_repeat Simple_repeat 2 47 0 6 881 237 313 71 0 chr13 38837757 38837856 -81446456 - PB1D10 SINE Alu -11 106 1 6 881 348 214 254 18 chr13 38837858 38837972 -81446340 - MLT1A0 LTR MaLR -63 302 162 6 881 355 282 61 0 chr13 38838667 38838798 -81445514 - RMER15 LTR ERVL -15 560 422 6 881 231 250 57 49 chr13 38839169 38839291 -81445021 + ORR1E LTR MaLR 116 238 -121 6 881 228 238 0 16 chr13 38839354 38839418 -81444894 + ORR1E LTR MaLR 294 356 -23 6 881 742 221 62 33 chr13 38839879 38840148 -81444164 - L1MB3 LINE L1 -109 6069 5795 6 881 1057 222 74 19 chr13 38840398 38840669 -81443643 - B4A SINE B4 0 292 7 6 881 2195 157 40 5 chr13 38843629 38844000 -81440312 - ORR1C2 LTR MaLR 0 384 1 6 881 1469 64 21 0 chr13 38844489 38844677 -81439635 + B2_Mm2 SINE B2 3 194 -1 6 881 335 340 105 38 chr13 38844964 38845279 -81439033 - MLT2B1 LTR ERVL -78 442 107 6 881 1431 185 128 41 chr13 38846004 38846348 -81437964 - ORR1D1 LTR MaLR 0 374 1 6 881 223 146 36 0 chr13 38846380 38846435 -81437877 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 881 335 293 0 72 chr13 38846487 38846588 -81437724 - B4A SINE B4 -4 288 194 6 881 1334 178 0 4 chr13 38846588 38846814 -81437498 + URR1B DNA MER1_type 1 225 0 6 881 335 293 0 72 chr13 38846814 38846837 -81437475 - B4A SINE B4 -99 193 173 6 881 293 301 14 0 chr13 38846909 38846982 -81437330 - PB1 SINE Alu -7 120 47 6 881 297 151 0 0 chr13 38847475 38847528 -81436784 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 881 351 0 0 0 chr13 38848989 38849028 -81435284 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 881 309 151 0 0 chr13 38849653 38849706 -81434606 + GA-rich Low_complexity Low_complexity 2 54 0 6 881 411 282 15 30 chr13 38850025 38850160 -81434152 + RSINE1 SINE B4 23 155 -10 6 881 1451 155 77 24 chr13 38850536 38850834 -81433478 + ORR1A4 LTR MaLR 3 316 -13 6 881 487 247 169 27 chr13 38850829 38851012 -81433300 - MER57C2 LTR ERV1 -217 217 9 6 881 1125 119 45 6 chr13 38851629 38851806 -81432506 - B2_Mm2 SINE B2 -10 185 2 6 881 378 0 0 0 chr13 38852067 38852109 -81432203 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 881 348 64 0 0 chr13 38852632 38852679 -81431633 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 6 881 856 246 23 32 chr13 38853720 38853852 -81430460 - ID_B1 SINE B4 -8 216 90 6 881 2303 100 25 3 chr13 38853852 38854172 -81430140 + ORR1A2 LTR MaLR 1 327 0 6 881 856 246 23 32 chr13 38854172 38854257 -81430055 - ID SINE ID -135 89 1 6 881 402 70 28 14 chr13 38854805 38854877 -81429435 + (CA)n Simple_repeat Simple_repeat 2 74 0 6 881 512 30 0 15 chr13 38855177 38855244 -81429068 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 881 485 302 25 12 chr13 38856635 38856796 -81427516 - RSINE1 SINE B4 0 165 3 6 881 180 0 0 0 chr13 38856867 38856887 -81427425 + (TC)n Simple_repeat Simple_repeat 1 20 0 6 881 28 29 0 0 chr13 38858369 38858404 -81425908 + AT_rich Low_complexity Low_complexity 1 35 0 6 881 3716 99 73 21 chr13 38858406 38858982 -81425330 + Lx4A LINE L1 6450 7055 -3 6 881 22 0 0 0 chr13 38858996 38859018 -81425294 + AT_rich Low_complexity Low_complexity 1 22 0 6 881 2528 65 7 2 chr13 38859154 38859482 -81424830 + L1_Mm LINE L1 5290 5615 -688 6 881 8266 46 2 0 chr13 38859482 38860464 -81423848 + L1Md_F2 LINE L1 5587 6570 -12 6 881 5296 122 64 17 chr13 38860954 38861732 -81422580 + Lx2B LINE L1 6062 6865 -135 6 881 204 40 0 0 chr13 38861732 38861757 -81422555 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 6 881 5296 122 64 17 chr13 38861757 38861838 -81422474 + Lx2B LINE L1 6866 6960 -40 6 881 1065 306 84 19 chr13 38861982 38862408 -81421904 + MLT1C LTR MaLR 7 460 -7 6 881 447 277 87 41 chr13 38862441 38862637 -81421675 + MTD LTR MaLR 1 205 -214 6 881 211 172 186 17 chr13 38862849 38862908 -81421404 + MIR3 SINE MIR 117 185 -23 6 881 204 40 0 0 chr13 38863024 38863049 -81421263 + (A)n Simple_repeat Simple_repeat 1 25 0 6 881 180 111 0 0 chr13 38863744 38863771 -81420541 + (TATATG)n Simple_repeat Simple_repeat 5 31 0 6 881 878 128 25 20 chr13 38863827 38864275 -81420037 + (TCTA)n Simple_repeat Simple_repeat 1 449 0 6 881 296 334 49 9 chr13 38865967 38866133 -81418179 - MIRb SINE MIR -80 188 11 6 881 571 223 0 42 chr13 38866370 38866642 -81417670 + (CATATA)n Simple_repeat Simple_repeat 1 260 0 6 881 184 59 59 0 chr13 38866991 38867025 -81417287 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 881 22 0 0 0 chr13 38867587 38867609 -81416703 + AT_rich Low_complexity Low_complexity 1 22 0 6 881 903 115 0 0 chr13 38867848 38867987 -81416325 + (CCA)n Simple_repeat Simple_repeat 1 139 0 6 881 324 292 44 0 chr13 38868004 38868117 -81416195 + MER5A DNA MER1_type 64 181 -8 6 881 931 161 159 72 chr13 38868181 38868389 -81415923 + URR1A DNA MER1_type 1 226 0 6 881 365 67 0 32 chr13 38869020 38869082 -81415230 + (TTG)n Simple_repeat Simple_repeat 1 60 0 6 881 1126 37 0 0 chr13 38869082 38869216 -81415096 - B1_Mus2 SINE Alu -13 134 1 6 881 558 180 6 11 chr13 38870687 38870867 -81413445 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 881 480 35 0 0 chr13 38871349 38871407 -81412905 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 881 382 338 21 0 chr13 38873333 38873475 -81410837 + MIR3 SINE MIR 36 180 -28 6 881 594 0 0 0 chr13 38874414 38874480 -81409832 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 881 4106 61 6 0 chr13 38875617 38876123 -81408189 - L1_Mus1 LINE L1 -244 6323 5815 6 881 1788 46 0 0 chr13 38876123 38876339 -81407973 + L1_Mus1 LINE L1 6351 6566 -1 6 881 22 0 0 0 chr13 38877059 38877081 -81407231 + AT_rich Low_complexity Low_complexity 1 22 0 6 881 1019 59 0 0 chr13 38877081 38877217 -81407095 - B1_Mm SINE Alu 0 147 12 6 881 462 276 28 56 chr13 38877223 38877403 -81406909 - ID_B1 SINE B4 -49 175 1 6 881 381 22 0 0 chr13 38877515 38877561 -81406751 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 881 616 297 25 102 chr13 38877567 38877629 -81406683 - B4A SINE B4 0 292 236 6 881 1182 79 0 0 chr13 38877629 38877896 -81406416 + (TCC)n Simple_repeat Simple_repeat 1 269 -184 6 881 1182 79 0 0 chr13 38877902 38878082 -81406230 + (TCC)n Simple_repeat Simple_repeat 270 453 0 6 881 616 297 25 102 chr13 38878082 38878324 -81405988 - B4A SINE B4 -63 229 2 6 881 827 127 30 17 chr13 38879464 38879702 -81404610 + GA-rich Low_complexity Low_complexity 1 241 0 6 881 21 57 0 0 chr13 38880348 38880383 -81403929 + AT_rich Low_complexity Low_complexity 1 35 0 6 881 217 75 24 24 chr13 38880889 38880930 -81403382 + (CGGGGG)n Simple_repeat Simple_repeat 3 43 0 6 881 345 24 0 0 chr13 38881169 38881211 -81403101 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 881 288 130 43 0 chr13 38881215 38881284 -81403028 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 881 252 260 86 104 chr13 38882233 38882396 -81401916 + L1MEf LINE L1 364 523 -5613 6 881 447 359 25 44 chr13 38882441 38882715 -81401597 + L1MEf LINE L1 651 919 -5323 6 881 742 281 158 42 chr13 38882976 38883945 -81400367 + L1MEf LINE L1 1332 2414 -3732 6 881 396 299 57 74 chr13 38883990 38884394 -81399918 + L1MEf LINE L1 2537 2933 -3213 6 881 465 266 0 16 chr13 38884448 38884573 -81399739 + ID_B1 SINE B4 78 196 -28 6 881 308 139 13 0 chr13 38884598 38884677 -81399635 + (TA)n Simple_repeat Simple_repeat 2 81 0 6 881 21 36 0 0 chr13 38886019 38886047 -81398265 + AT_rich Low_complexity Low_complexity 1 28 0 6 881 818 285 8 0 chr13 38886068 38886314 -81397998 + Lx9 LINE L1 7256 7503 -141 6 881 276 53 0 0 chr13 38886685 38886723 -81397589 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 6 881 705 230 0 0 chr13 38887488 38887666 -81396646 + (TA)n Simple_repeat Simple_repeat 1 178 0 6 881 250 118 0 0 chr13 38887666 38887700 -81396612 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 881 23 0 0 0 chr13 38888986 38889009 -81395303 + AT_rich Low_complexity Low_complexity 1 23 0 6 881 374 205 0 3 chr13 38889073 38889153 -81395159 - B3A SINE B2 -80 118 39 6 881 675 178 0 0 chr13 38890045 38890219 -81394093 + GA-rich Low_complexity Low_complexity 1 174 0 6 881 408 20 0 0 chr13 38891264 38891313 -81392999 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 881 216 0 0 0 chr13 38891396 38891420 -81392892 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 881 658 162 68 23 chr13 38891422 38891555 -81392757 - B1_Mur4 SINE Alu -10 140 2 6 881 423 231 61 61 chr13 38891627 38891825 -81392487 - L1MA6 LINE L1 0 6300 6103 6 881 342 306 40 76 chr13 38892032 38892382 -81391930 - MTEa LTR MaLR -16 363 6 6 881 3228 59 7 0 chr13 38892725 38893132 -81391180 - L1Md_F2 LINE L1 -1 6581 6172 6 881 313 283 106 10 chr13 38893231 38893438 -81390874 - L1MDb LINE L1 -5289 1120 894 6 881 279 0 0 0 chr13 38894289 38894320 -81389992 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 881 205 335 97 29 chr13 38894674 38894849 -81389463 + L3 LINE CR1 4009 4195 -294 7 881 203 250 15 0 chr13 38895138 38895206 -81389106 + GA-rich Low_complexity Low_complexity 1 69 0 7 881 356 88 0 17 chr13 38895247 38895305 -81389007 + (GGGAA)n Simple_repeat Simple_repeat 2 58 0 7 881 332 239 114 0 chr13 38895650 38895738 -81388574 - ID_B1 SINE B4 -13 211 114 7 881 270 0 0 0 chr13 38896254 38896284 -81388028 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 7 881 329 40 40 0 chr13 38896681 38896731 -81387581 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 7 881 218 217 32 48 chr13 38896999 38897062 -81387250 + PB1D9 SINE Alu 56 117 -3 7 881 377 39 20 0 chr13 38897084 38897135 -81387177 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 881 350 250 78 29 chr13 38898465 38898568 -81385744 - MLT1H1 LTR MaLR -58 497 390 7 881 392 0 0 20 chr13 38899205 38899254 -81385058 + (TTA)n Simple_repeat Simple_repeat 1 48 0 7 881 230 244 12 0 chr13 38899755 38899837 -81384475 + CT-rich Low_complexity Low_complexity 2 84 0 7 881 235 362 66 24 chr13 38900430 38900597 -81383715 - ORR1E LTR MaLR -182 177 4 7 881 1133 196 19 14 chr13 38901370 38901577 -81382735 + B3 SINE B2 1 208 -8 7 881 1382 193 40 24 chr13 38902893 38903244 -81381068 - ORR1B1 LTR MaLR -8 359 1 7 881 234 254 28 0 chr13 38903244 38903313 -81380999 + Tigger7 DNA MER2_type 48 118 -2373 7 881 300 292 0 45 chr13 38903417 38903528 -81380784 + Lx8 LINE L1 7366 7471 -2 7 881 246 170 19 0 chr13 38903925 38903978 -81380334 + CT-rich Low_complexity Low_complexity 2 55 0 7 881 717 45 0 0 chr13 38903986 38904075 -81380237 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 7 881 629 148 0 7 chr13 38904076 38904219 -81380093 + CT-rich Low_complexity Low_complexity 2 143 0 7 881 234 0 0 0 chr13 38905862 38905888 -81378424 + (T)n Simple_repeat Simple_repeat 1 26 0 7 881 25 0 0 0 chr13 38906736 38906761 -81377551 + AT_rich Low_complexity Low_complexity 1 25 0 7 881 207 139 0 0 chr13 38907175 38907211 -81377101 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 7 881 212 227 0 0 chr13 38908547 38908591 -81375721 + C-rich Low_complexity Low_complexity 1 44 0 7 881 23 0 0 0 chr13 38908732 38908755 -81375557 + AT_rich Low_complexity Low_complexity 1 23 0 7 881 627 81 0 0 chr13 38908782 38908868 -81375444 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 7 881 273 29 0 0 chr13 38909017 38909051 -81375261 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 7 881 477 248 43 0 chr13 38909395 38909512 -81374800 - B4A SINE B4 -27 265 144 7 881 626 304 26 69 chr13 38910245 38910549 -81373763 - B4A SINE B4 0 292 2 7 881 646 264 85 18 chr13 38910570 38910852 -81373460 - L1MB1 LINE L1 -11 6157 5857 7 881 426 286 124 61 chr13 38910851 38911294 -81373018 + L1MB1 LINE L1 5416 5886 -282 7 881 229 315 68 15 chr13 38911669 38911801 -81372511 - L3 LINE CR1 -1106 3383 3245 7 881 663 249 199 3 chr13 38911803 38912089 -81372223 - L1MB3 LINE L1 -3 6180 5839 7 881 1712 208 18 42 chr13 38912187 38912568 -81371744 + MT2A LTR ERVL 1 372 -161 7 881 226 260 180 0 chr13 38912557 38912657 -81371655 + MLT2B3 LTR ERVL 435 552 -2 7 881 1502 309 103 37 chr13 38913618 38914112 -81370200 - L1MA6 LINE L1 -20 6280 5783 7 881 890 44 14 14 chr13 38914112 38914250 -81370062 + (TCTA)n Simple_repeat Simple_repeat 3 140 0 7 881 1502 309 103 37 chr13 38914250 38914651 -81369661 - L1MA6 LINE L1 -518 5782 5327 7 881 342 299 53 67 chr13 38914947 38915155 -81369157 + RMER15 LTR ERVL 347 551 -24 7 881 545 0 0 15 chr13 38915235 38915301 -81369011 + (GAGAA)n Simple_repeat Simple_repeat 5 69 0 7 881 338 208 38 0 chr13 38915318 38915424 -81368888 + Lx6 LINE L1 7345 7454 -6 7 881 976 221 9 27 chr13 38915851 38916070 -81368242 + B3 SINE B2 2 216 0 7 881 357 283 17 42 chr13 38917114 38917232 -81367080 - PB1D10 SINE Alu 0 117 3 7 881 2550 68 3 9 chr13 38917363 38917692 -81366620 - ORR1A2 LTR MaLR 0 327 1 7 881 780 312 99 71 chr13 38918016 38918201 -81366111 - L1MC2 LINE L1 -211 6133 5977 7 881 872 217 61 47 chr13 38918201 38918414 -81365898 - B3 SINE B2 0 216 1 7 881 780 312 99 71 chr13 38918414 38919075 -81365237 - L1MC2 LINE L1 -368 5976 5263 7 881 260 269 9 27 chr13 38919155 38919266 -81365046 - L1MC2 LINE L1 -1046 5100 4992 7 881 182 128 0 25 chr13 38919279 38919319 -81364993 + (TA)n Simple_repeat Simple_repeat 2 40 0 7 881 863 217 6 11 chr13 38919331 38919508 -81364804 - B3A SINE B2 -19 179 4 7 881 307 268 160 63 chr13 38919521 38919852 -81364460 - L1MC2 LINE L1 -1153 4993 4631 7 881 488 306 118 71 chr13 38920479 38920775 -81363537 - MTEb LTR MaLR -13 366 57 7 881 912 351 82 47 chr13 38920817 38921362 -81362950 - MTE-int LTR MaLR -500 1080 523 7 881 414 0 0 0 chr13 38921362 38921408 -81362904 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 881 963 273 29 18 chr13 38921411 38921691 -81362621 - B4 SINE B4 -8 284 2 7 881 912 351 82 47 chr13 38921691 38921870 -81362442 - MTE-int LTR MaLR -1058 522 331 7 881 765 181 0 21 chr13 38921895 38922036 -81362276 + B1_Mur4 SINE Alu 6 143 -7 7 881 270 95 0 0 chr13 38922039 38922081 -81362231 + (CAAAC)n Simple_repeat Simple_repeat 2 43 0 7 881 1139 77 0 0 chr13 38922105 38922248 -81362064 + B1_Mus1 SINE Alu 1 143 -5 7 881 281 26 26 0 chr13 38922262 38922300 -81362012 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 881 437 278 250 22 chr13 38922316 38922588 -81361724 - MTE-int LTR MaLR -1245 335 2 7 881 268 231 76 29 chr13 38922609 38922719 -81361593 - MTEa LTR MaLR -38 341 224 7 881 901 233 131 115 chr13 38923275 38923648 -81360664 - MTE2a LTR MaLR 0 379 1 7 881 239 161 52 35 chr13 38923844 38923902 -81360410 + T-rich Low_complexity Low_complexity 4 62 0 7 881 344 340 68 0 chr13 38924233 38924424 -81359888 - L1M5 LINE L1 -404 5775 5572 7 881 21 36 0 0 chr13 38924768 38924796 -81359516 + AT_rich Low_complexity Low_complexity 1 28 0 7 881 2328 107 3 15 chr13 38926980 38927313 -81356999 - ORR1A4 LTR MaLR 0 329 1 7 881 22 0 0 0 chr13 38927613 38927635 -81356677 + AT_rich Low_complexity Low_complexity 1 22 0 7 882 365 0 0 22 chr13 38928616 38928662 -81355650 + (CAAAA)n Simple_repeat Simple_repeat 4 48 0 7 882 1031 53 35 17 chr13 38929226 38929399 -81354913 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 7 882 806 329 55 18 chr13 38930504 38930940 -81353372 - Charlie6 DNA MER1_type -687 2813 2362 7 882 561 301 106 24 chr13 38931042 38931224 -81353088 - Charlie6 DNA MER1_type -1321 2179 1987 7 882 540 221 122 0 chr13 38931224 38931355 -81352957 + B1_Mur1 SINE Alu 1 147 -2 7 882 561 301 106 24 chr13 38931355 38931465 -81352847 - Charlie6 DNA MER1_type -1514 1986 1865 7 882 300 235 0 14 chr13 38931832 38931901 -81352411 - B4A SINE B4 -2 290 223 7 882 549 207 51 8 chr13 38932441 38932558 -81351754 - B3 SINE B2 -60 156 35 7 882 214 245 0 0 chr13 38932675 38932724 -81351588 - B4 SINE B4 -233 59 11 7 882 238 360 93 0 chr13 38933019 38933158 -81351154 + LTR16B2 LTR ERVL 9 160 -302 7 882 1162 279 55 55 chr13 38933431 38933687 -81350625 + L1MD1 LINE L1 5512 5774 -468 7 882 278 26 0 25 chr13 38933687 38933727 -81350585 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 882 1162 279 55 55 chr13 38933727 38934051 -81350261 + L1MD1 LINE L1 5775 6092 -150 7 882 462 18 0 0 chr13 38934215 38934270 -81350042 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 882 396 247 20 40 chr13 38934710 38934811 -81349501 - RSINE1 SINE B4 0 165 67 7 882 273 259 82 0 chr13 38935621 38935706 -81348606 + RMER10A LTR ERVL 322 413 -29 7 882 847 262 59 0 chr13 38936542 38936763 -81347549 + B4A SINE B4 1 234 -58 7 882 796 270 87 7 chr13 38936863 38937139 -81347173 - MLT1A0 LTR MaLR -7 358 61 7 882 270 0 0 0 chr13 38937141 38937171 -81347141 + (T)n Simple_repeat Simple_repeat 1 30 0 7 882 576 310 92 42 chr13 38939144 38939498 -81344814 - Zaphod DNA Tip100 -87 3944 3563 7 882 1151 153 119 0 chr13 38939498 38939700 -81344612 + URR1A DNA MER1_type 1 226 0 7 882 576 310 92 42 chr13 38939700 38939803 -81344509 - Zaphod DNA Tip100 -469 3562 3464 7 882 1880 104 4 14 chr13 38940104 38940429 -81343883 - ORR1A2 LTR MaLR -8 338 17 7 882 501 125 0 0 chr13 38940416 38940504 -81343808 - ORR1A2 LTR MaLR -239 88 1 7 882 362 269 25 25 chr13 38940792 38940914 -81343398 - Zaphod DNA Tip100 -1342 2689 2568 7 882 3366 222 92 41 chr13 38941866 38942712 -81341600 - RMER1B Other Other -24 1042 154 7 882 953 296 50 64 chr13 38942728 38943085 -81341227 - RMER1B Other Other -703 363 12 7 882 241 333 49 7 chr13 38943360 38943502 -81340810 - MER5A DNA MER1_type -25 164 17 7 882 455 328 110 4 chr13 38943675 38943938 -81340374 - MER2 DNA MER2_type -9 336 46 7 882 474 18 0 0 chr13 38944099 38944154 -81340158 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 882 546 143 0 0 chr13 38944154 38944245 -81340067 + (TA)n Simple_repeat Simple_repeat 2 92 0 7 882 1000 74 11 49 chr13 38945170 38945354 -81338958 + (TCCC)n Simple_repeat Simple_repeat 3 179 0 7 882 357 219 17 8 chr13 38945355 38945475 -81338837 + CT-rich Low_complexity Low_complexity 4 124 0 7 882 426 276 0 0 chr13 38945488 38945593 -81338719 - PB1D9 SINE Alu -15 105 1 7 882 884 36 9 0 chr13 38945602 38945714 -81338598 + (TTC)n Simple_repeat Simple_repeat 2 114 0 7 882 1134 38 0 0 chr13 38945715 38945847 -81338465 - B1_Mm SINE Alu -15 132 1 7 882 25 0 0 0 chr13 38945911 38945936 -81338376 + AT_rich Low_complexity Low_complexity 1 25 0 7 882 381 263 40 0 chr13 38947456 38947555 -81336757 - PB1D9 SINE Alu -14 106 4 7 882 202 202 47 23 chr13 38947670 38947756 -81336556 + (TA)n Simple_repeat Simple_repeat 2 89 0 7 882 225 0 0 0 chr13 38947898 38947923 -81336389 + (A)n Simple_repeat Simple_repeat 1 25 0 7 882 936 306 46 22 chr13 38948141 38948512 -81335800 + RCHARR1 DNA MER1_type 11 390 -584 7 882 833 265 4 39 chr13 38948517 38948772 -81335540 + RCHARR1 DNA MER1_type 729 974 0 7 882 3058 78 5 10 chr13 38949263 38949665 -81334647 + MTB LTR MaLR 1 400 0 7 882 7341 77 35 40 chr13 38949665 38950768 -81333544 + MTB-int LTR MaLR 1 1098 0 7 882 1968 207 22 14 chr13 38950846 38951262 -81333050 - MTD LTR MaLR 0 419 1 7 882 1953 139 12 193 chr13 38951280 38951761 -81332551 - ORR1B1 LTR MaLR 0 394 1 7 882 931 233 5 25 chr13 38952076 38952320 -81331992 - ORR1C2 LTR MaLR 0 384 149 7 882 1891 118 14 114 chr13 38952347 38952722 -81331590 - RMER4A LTR ERVK -80 386 50 8 882 1282 34 0 0 chr13 38952722 38952869 -81331443 + B1_Mm SINE Alu 1 147 0 8 882 1891 118 14 114 chr13 38952869 38952922 -81331390 - RMER4A LTR ERVK -417 49 1 8 882 456 273 42 28 chr13 38954347 38954490 -81329822 + MER44D DNA MER2_type 20 164 -541 8 882 278 286 62 0 chr13 38954544 38954656 -81329656 + MER44D DNA MER2_type 527 645 -60 8 882 473 0 18 0 chr13 38955480 38955537 -81328775 + (TC)n Simple_repeat Simple_repeat 1 58 0 8 882 422 180 136 29 chr13 38955630 38955733 -81328579 - B3 SINE B2 -101 115 2 8 882 218 354 102 5 chr13 38955991 38956187 -81328125 + L2 LINE L2 2234 2448 -971 8 882 570 167 0 58 chr13 38957143 38957334 -81326978 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 882 1962 288 92 14 chr13 38958566 38959263 -81325049 + Lx8 LINE L1 6722 7472 -1 8 882 2159 294 99 63 chr13 38959692 38960543 -81323769 - Lx8 LINE L1 -725 6748 5877 8 882 945 121 0 0 chr13 38960543 38960717 -81323595 + (GGAGA)n Simple_repeat Simple_repeat 3 176 0 8 882 2159 286 46 9 chr13 38960717 38961130 -81323182 - Lx8 LINE L1 -1597 5876 5437 8 882 3717 240 74 33 chr13 38961172 38962359 -81321953 - Lx8 LINE L1 -736 5144 3909 8 882 293 319 50 0 chr13 38962763 38962882 -81321430 + MIR SINE MIR 12 136 -126 8 882 5645 79 51 4 chr13 38963549 38964336 -81319976 - Lx3_Mus LINE L1 0 7009 6186 8 882 4703 53 10 6 chr13 38964337 38965177 -81319135 + Lx3_Mus LINE L1 5349 6183 -826 8 882 383 296 0 0 chr13 38966349 38966528 -81317784 + (TG)n Simple_repeat Simple_repeat 1 179 0 8 882 225 262 16 0 chr13 38967368 38967429 -81316883 + MIRc SINE MIR 66 127 -141 8 882 592 194 0 0 chr13 38967610 38967708 -81316604 - PB1D9 SINE Alu -21 99 2 8 882 331 241 226 16 chr13 38967970 38968156 -81316156 + RMER15 LTR ERVL 351 575 0 8 882 402 280 12 74 chr13 38968376 38968538 -81315774 - RSINE1 SINE B4 0 165 14 8 882 7993 74 37 22 chr13 38968906 38970035 -81314277 + Lx3_Mus LINE L1 5863 7008 -1 8 882 861 184 0 0 chr13 38970045 38970213 -81314099 + GA-rich Low_complexity Low_complexity 2 169 0 8 882 645 80 0 0 chr13 38970213 38970301 -81314011 + (GGAA)n Simple_repeat Simple_repeat 4 91 0 8 882 249 40 39 39 chr13 38971593 38971645 -81312667 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 8 882 3038 105 32 0 chr13 38972028 38972467 -81311845 + Lx3B LINE L1 6521 6973 0 8 882 1646 303 91 33 chr13 38972915 38973617 -81310695 - Lx8 LINE L1 -232 7241 6499 8 882 418 327 126 9 chr13 38974009 38974231 -81310081 - MER2 DNA MER2_type -8 337 90 8 882 471 48 0 0 chr13 38974334 38974396 -81309916 + (TTTTG)n Simple_repeat Simple_repeat 2 63 0 8 882 609 261 92 64 chr13 38974437 38974719 -81309593 - B4A SINE B4 0 292 3 8 882 266 261 48 40 chr13 38975425 38975549 -81308763 - L1M3 LINE L1 -1444 4696 4572 8 882 234 91 0 0 chr13 38975561 38975594 -81308718 + (T)n Simple_repeat Simple_repeat 1 33 0 8 882 514 280 133 21 chr13 38975596 38975881 -81308431 - ORR1E LTR MaLR -42 317 1 8 882 39064 41 0 3 chr13 38976106 38982464 -81301848 - L1Md_T LINE L1 -1 6584 148 8 882 286 353 131 39 chr13 38982522 38982805 -81301507 - Lx8 LINE L1 -8 7465 7157 8 882 426 330 89 40 chr13 38983009 38983458 -81300854 - L1MB8 LINE L1 -41 6137 5667 8 882 374 333 83 5 chr13 38983451 38983656 -81300656 - L1MA6 LINE L1 -10 6290 6070 8 882 276 235 89 15 chr13 38983680 38983800 -81300512 - L1M5 LINE L1 -707 5652 5522 8 882 276 276 35 0 chr13 38985612 38985699 -81298613 - MER2 DNA MER2_type -98 247 158 8 882 291 157 0 0 chr13 38985884 38985935 -81298377 + CT-rich Low_complexity Low_complexity 4 54 0 8 882 433 223 32 0 chr13 38985948 38986042 -81298270 - PB1D10 SINE Alu 0 117 21 8 882 393 22 0 0 chr13 38986138 38986184 -81298128 + (TC)n Simple_repeat Simple_repeat 2 47 0 8 882 378 0 0 0 chr13 38986184 38986225 -81298087 + (TG)n Simple_repeat Simple_repeat 1 42 0 8 882 495 0 0 0 chr13 38988847 38988902 -81295410 + (GA)n Simple_repeat Simple_repeat 2 56 0 8 882 543 31 0 0 chr13 38989288 38989353 -81294959 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 882 263 281 12 12 chr13 38989485 38989568 -81294744 + (CCA)n Simple_repeat Simple_repeat 3 85 0 8 882 751 232 84 11 chr13 38990257 38990436 -81293876 - 7SK RNA RNA -91 240 49 8 882 783 198 23 86 chr13 38990968 38991189 -81293123 + MTC-int LTR MaLR 522 728 -530 8 882 401 208 38 47 chr13 38991409 38991515 -81292797 - B1_Mur1 SINE Alu 0 149 45 8 882 1340 261 76 38 chr13 38991796 38992215 -81292097 - Lx8 LINE L1 -220 7253 6819 8 882 468 0 0 0 chr13 38992391 38992443 -81291869 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 882 747 159 94 0 chr13 38992444 38992582 -81291730 - B2_Mm2 SINE B2 -43 152 2 8 882 243 307 22 11 chr13 38992916 38993005 -81291307 - PB1D10 SINE Alu -27 90 1 8 882 727 220 0 7 chr13 38993063 38993205 -81291107 - B1_Mur1 SINE Alu -1 148 8 8 882 317 282 14 0 chr13 38993413 38993484 -81290828 - Lx7 LINE L1 -1041 6655 6584 8 882 240 86 0 0 chr13 38993484 38993519 -81290793 + (CAGGC)n Simple_repeat Simple_repeat 3 37 0 8 882 453 116 0 0 chr13 38993537 38993606 -81290706 + (T)n Simple_repeat Simple_repeat 1 69 0 8 882 1209 74 0 0 chr13 38993606 38993754 -81290558 - B1_Mus1 SINE Alu 0 148 1 8 882 1104 295 112 15 chr13 38993765 38994246 -81290066 + Lx8 LINE L1 6946 7473 0 8 882 504 281 52 42 chr13 38994427 38994620 -81289692 + MTD LTR MaLR 6 200 -219 8 882 377 270 83 39 chr13 38994850 38995031 -81289281 + MLT1B LTR MaLR 7 195 -195 8 882 252 276 0 0 chr13 38995049 38995176 -81289136 + (CA)n Simple_repeat Simple_repeat 1 127 0 8 882 186 143 0 0 chr13 38995270 38995305 -81289007 + (TA)n Simple_repeat Simple_repeat 1 35 0 8 882 465 285 0 16 chr13 38995310 38995492 -81288820 + (CA)n Simple_repeat Simple_repeat 2 180 0 8 882 559 302 0 6 chr13 38995534 38995776 -81288536 + (CA)n Simple_repeat Simple_repeat 1 240 0 8 882 375 315 73 6 chr13 38995782 38995961 -81288351 + MLT1B LTR MaLR 181 371 -19 8 882 2428 44 0 3 chr13 38996453 38996747 -81287565 - L1_Mus1 LINE L1 0 6567 6275 8 882 1659 231 16 11 chr13 38996747 38997114 -81287198 - Lx6 LINE L1 -24 7436 7068 8 882 534 262 0 51 chr13 38997262 38997399 -81286913 + RSINE1 SINE B4 3 132 -33 8 882 216 277 90 48 chr13 38997524 38997547 -81286765 + B4A SINE B4 71 160 -132 8 882 610 184 104 0 chr13 38997547 38997672 -81286640 + B1_Mur1 SINE Alu 6 143 -6 8 882 216 277 90 48 chr13 38997672 38997691 -81286621 + B4A SINE B4 161 244 -48 8 882 357 145 0 0 chr13 38997693 38997755 -81286557 + (GGA)n Simple_repeat Simple_repeat 1 62 0 8 882 311 313 17 0 chr13 38997763 38997878 -81286434 + L1MA8 LINE L1 6175 6291 0 8 882 291 85 0 0 chr13 39000108 39000155 -81284157 + (CAAAC)n Simple_repeat Simple_repeat 2 48 0 1 882 880 271 122 21 chr13 39000282 39000617 -81283695 + ORR1D2 LTR MaLR 2 370 0 2 882 379 302 35 0 chr13 39000850 39000966 -81283346 + PB1D7 SINE Alu 1 120 0 3 882 694 323 34 41 chr13 39001292 39001583 -81282729 + B4A SINE B4 4 292 0 4 882 422 49 16 0 chr13 39001610 39001671 -81282641 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 882 1143 150 33 9 chr13 39001840 39002055 -81282257 - URR1B DNA MER1_type 0 225 6 6 882 317 306 45 0 chr13 39002309 39002443 -81281869 - MLT1B LTR MaLR -3 387 248 7 882 906 173 162 35 chr13 39002743 39002941 -81281371 - URR1A DNA MER1_type -1 225 3 8 882 1148 234 52 134 chr13 39004121 39004525 -81279787 - MTEb LTR MaLR -6 373 3 9 882 951 275 62 122 chr13 39004529 39004734 -81279578 - MTEb-int LTR MaLR -2 1578 1356 9 882 263 38 36 36 chr13 39004734 39004789 -81279523 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 1 882 951 275 62 122 chr13 39004789 39004886 -81279426 - MTEb-int LTR MaLR -225 1355 1266 9 882 1092 109 0 0 chr13 39004886 39005033 -81279279 + B1_Mus1 SINE Alu 2 148 0 1 882 951 275 62 122 chr13 39005033 39005197 -81279115 - MTEb-int LTR MaLR -315 1265 1139 9 882 895 258 147 73 chr13 39005182 39005550 -81278762 - MTEb-int LTR MaLR -680 900 506 9 882 329 280 125 23 chr13 39005636 39005764 -81278548 - MTEb-int LTR MaLR -1254 326 186 9 882 297 0 0 0 chr13 39005783 39005816 -81278496 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 882 542 254 0 0 chr13 39005821 39005939 -81278373 - B1_Mur4 SINE Alu -15 135 18 1 882 1393 243 62 14 chr13 39005959 39006314 -81277998 - MTEb LTR MaLR -7 372 1 1 882 241 305 157 22 chr13 39006914 39007048 -81277264 - MER5A DNA MER1_type 0 189 38 1 882 298 298 114 75 chr13 39007127 39007714 -81276598 + L1M3 LINE L1 4323 4969 -1177 1 882 1037 78 0 38 chr13 39007946 39008132 -81276180 + (GA)n Simple_repeat Simple_repeat 2 180 0 1 882 539 94 56 28 chr13 39008133 39008275 -81276037 + GA-rich Low_complexity Low_complexity 1 146 0 1 882 798 204 5 86 chr13 39008285 39008483 -81275829 - ORR1D1 LTR MaLR -192 182 1 1 882 231 207 71 24 chr13 39008483 39008567 -81275745 + Lx9 LINE L1 7489 7576 -68 2 882 3406 68 0 0 chr13 39011446 39011875 -81272437 - L1Md_F2 LINE L1 -756 5127 4699 2 882 2754 52 0 0 chr13 39011870 39012197 -81272115 + L1Md_F2 LINE L1 5260 5586 -297 2 882 7489 64 5 55 chr13 39012197 39013233 -81271079 + L1Md_F2 LINE L1 5587 6570 -12 2 882 587 335 126 51 chr13 39013233 39013759 -81270553 - MTE-int LTR MaLR -119 1461 897 2 882 555 16 0 0 chr13 39013762 39013826 -81270486 + (TA)n Simple_repeat Simple_repeat 2 65 0 2 882 280 107 12 62 chr13 39013896 39013976 -81270336 + CT-rich Low_complexity Low_complexity 1 76 0 2 882 325 299 195 52 chr13 39014252 39015243 -81269069 - L1M5 LINE L1 -1817 4329 3197 2 882 432 179 40 23 chr13 39016144 39016321 -81267991 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 882 631 280 32 5 chr13 39016321 39016511 -81267801 - B3A SINE B2 -3 195 1 2 882 747 244 119 73 chr13 39017347 39017701 -81266611 - ORR1D2 LTR MaLR 0 370 1 2 882 1629 213 29 39 chr13 39018400 39018432 -81265880 - MTD LTR MaLR -13 406 379 2 882 2442 75 16 6 chr13 39018432 39018752 -81265560 + ORR1A2 LTR MaLR 5 327 0 3 882 1629 213 29 39 chr13 39018752 39019129 -81265183 - MTD LTR MaLR -41 378 1 2 882 564 62 0 0 chr13 39019906 39019987 -81264325 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 3 882 254 333 37 0 chr13 39021009 39021090 -81263222 + MER5A1 DNA MER1_type 17 100 -66 3 882 233 302 0 0 chr13 39021134 39021197 -81263115 + PB1 SINE Alu 2 64 -63 3 882 372 316 143 26 chr13 39021799 39022072 -81262240 - MLT1A0 LTR MaLR -60 305 1 3 882 441 0 0 0 chr13 39023086 39023135 -81261177 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 882 299 251 313 0 chr13 39023301 39023464 -81260848 + MLT1A LTR MaLR 97 310 -64 3 882 549 0 0 0 chr13 39023476 39023537 -81260775 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 882 993 84 23 0 chr13 39023540 39023671 -81260641 - B1_Mus1 SINE Alu -14 134 1 3 882 23 33 0 0 chr13 39024018 39024048 -81260264 + AT_rich Low_complexity Low_complexity 1 30 0 3 882 996 268 114 14 chr13 39024943 39025302 -81259010 - MTD LTR MaLR -12 407 13 4 882 610 280 107 29 chr13 39025310 39025582 -81258730 + Lx8 LINE L1 7164 7456 -17 4 882 22 35 0 0 chr13 39025913 39025942 -81258370 + AT_rich Low_complexity Low_complexity 1 29 0 4 882 3681 162 79 6 chr13 39026902 39027589 -81256723 + RMER19A LTR ERVK 1 737 0 4 882 324 231 26 0 chr13 39028816 39028894 -81255418 + ID4_ SINE ID 2 81 -2 4 882 263 147 29 0 chr13 39030566 39030634 -81253678 + (TCTG)n Simple_repeat Simple_repeat 2 71 0 4 882 249 109 0 0 chr13 39030636 39030682 -81253630 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 882 252 302 231 8 chr13 39030770 39030887 -81253425 + B3A SINE B2 3 145 -53 4 882 468 0 0 0 chr13 39030901 39030953 -81253359 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 882 22 0 0 0 chr13 39030976 39030998 -81253314 + AT_rich Low_complexity Low_complexity 1 22 0 4 882 247 296 96 0 chr13 39030998 39031113 -81253199 + L1M5 LINE L1 4484 4609 -1537 5 882 1153 152 76 0 chr13 39032704 39032914 -81251398 - URR1A DNA MER1_type 0 226 1 5 882 279 0 0 0 chr13 39033078 39033109 -81251203 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 882 342 206 0 0 chr13 39033475 39033548 -81250764 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 882 676 263 79 8 chr13 39037387 39037615 -81246697 - ID_B1 SINE B4 -47 245 2 5 882 351 0 0 0 chr13 39037888 39037927 -81246385 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 882 1148 33 0 19 chr13 39039437 39039591 -81244721 + (CA)n Simple_repeat Simple_repeat 2 152 0 5 882 872 65 8 0 chr13 39041118 39041242 -81243070 + (GA)n Simple_repeat Simple_repeat 1 125 0 5 882 291 282 8 17 chr13 39041775 39041894 -81242418 + L1_Mur3 LINE L1 1550 1667 -4213 5 882 542 322 91 19 chr13 39041932 39042349 -81241963 + L1M2 LINE L1 2282 2693 -3895 5 882 427 313 100 17 chr13 39042511 39042872 -81241440 + L1M2 LINE L1 2957 3347 -3498 5 882 325 229 72 0 chr13 39042879 39042962 -81241350 + L1_Mur1 LINE L1 3777 3865 -2021 6 882 208 245 0 0 chr13 39042964 39043013 -81241299 - MIR SINE MIR -91 171 123 6 882 243 0 0 0 chr13 39043155 39043182 -81241130 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 882 457 260 23 45 chr13 39043187 39043364 -81240948 + L1M2 LINE L1 4564 4736 -2106 5 882 264 226 0 0 chr13 39043386 39043439 -81240873 + RSINE1 SINE B4 3 55 -110 6 882 785 262 181 32 chr13 39043442 39044090 -81240222 + L1M2 LINE L1 4880 5623 -1222 5 882 1621 138 19 4 chr13 39044090 39044359 -81239953 + RMER13B LTR ERVK 29 301 -607 6 882 762 279 59 110 chr13 39044445 39045037 -81239275 + L1M2 LINE L1 5771 6359 -643 5 882 225 148 18 18 chr13 39046302 39046357 -81237955 + A-rich Low_complexity Low_complexity 4 58 0 6 882 858 275 18 0 chr13 39046574 39046792 -81237520 - ID_B1 SINE B4 -1 223 2 6 882 375 73 0 0 chr13 39046943 39046998 -81237314 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 882 442 307 39 33 chr13 39047006 39047188 -81237124 + B3A SINE B2 8 190 -8 6 882 281 309 0 12 chr13 39048240 39048322 -81235990 - B1F SINE Alu -59 90 10 6 882 338 298 67 9 chr13 39050477 39050582 -81233730 + B3A SINE B2 6 116 -82 7 882 264 77 0 0 chr13 39050625 39050664 -81233648 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 882 234 0 0 0 chr13 39050720 39050746 -81233566 + (G)n Simple_repeat Simple_repeat 1 26 0 7 882 246 212 60 15 chr13 39050750 39050817 -81233495 + B1F SINE Alu 79 148 -1 7 882 267 326 98 14 chr13 39051124 39051267 -81233045 - RSINE1 SINE B4 -9 156 2 7 882 180 0 0 0 chr13 39051288 39051308 -81233004 + (T)n Simple_repeat Simple_repeat 1 20 0 7 882 270 238 12 24 chr13 39051825 39051907 -81232405 + GA-rich Low_complexity Low_complexity 3 83 0 7 882 215 319 0 11 chr13 39052271 39052366 -81231946 + C-rich Low_complexity Low_complexity 87 180 0 7 882 381 213 22 33 chr13 39057241 39057421 -81226891 + (TATATG)n Simple_repeat Simple_repeat 1 178 0 7 110 4704 188 35 130 chr13 39058470 39059630 -81224682 - RMER1B Other Other -9 1057 8 7 883 1907 144 43 170 chr13 39059684 39060177 -81224135 - RLTR23 LTR ERV1 0 430 1 8 883 393 75 0 0 chr13 39060297 39060350 -81223962 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 883 5379 46 15 0 chr13 39061201 39061854 -81222458 - L1_Mus1 LINE L1 0 6567 5905 8 883 402 302 31 19 chr13 39061950 39062112 -81222200 - L1MC2 LINE L1 -123 6221 6058 8 883 245 170 0 0 chr13 39062626 39062673 -81221639 + RMER15 LTR ERVL 13 59 -516 8 883 2349 192 10 95 chr13 39062773 39063350 -81220962 + RMER15 LTR ERVL 35 562 -13 8 883 1124 164 59 36 chr13 39063366 39063587 -81220725 - URR1A DNA MER1_type 0 226 1 8 883 313 402 23 9 chr13 39063671 39063892 -81220420 - L3 LINE CR1 -118 4371 4148 8 883 494 70 14 0 chr13 39064032 39064103 -81220209 + (TC)n Simple_repeat Simple_repeat 2 73 0 8 883 269 250 16 0 chr13 39064280 39064344 -81219968 + ID SINE ID 2 66 -158 8 883 327 104 0 0 chr13 39065678 39065726 -81218586 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 883 413 272 87 13 chr13 39065745 39065894 -81218418 - Lx7 LINE L1 -348 7348 7189 9 883 360 0 0 0 chr13 39065931 39065971 -81218341 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 9 883 1897 226 52 31 chr13 39065979 39066400 -81217912 - Lx6 LINE L1 -169 7291 6862 9 883 3887 215 54 29 chr13 39066410 39066467 -81217845 + Lx6 LINE L1 5961 6037 -1423 9 883 180 0 0 0 chr13 39066467 39066487 -81217825 + (TGGA)n Simple_repeat Simple_repeat 1 20 0 9 883 3887 215 54 29 chr13 39066487 39067006 -81217306 + Lx6 LINE L1 6038 6554 -906 9 883 2345 133 45 5 chr13 39067006 39067385 -81216927 - ORR1B1 LTR MaLR 0 394 1 9 883 3887 215 54 29 chr13 39067385 39067698 -81216614 + Lx6 LINE L1 6555 6872 -588 9 883 184 171 0 0 chr13 39067982 39068017 -81216295 + L2c LINE L2 3326 3360 -27 9 883 553 304 6 6 chr13 39071398 39071557 -81212755 + RSINE1 SINE B4 3 161 -4 9 883 1313 225 89 35 chr13 39072457 39072604 -81211708 + RMER6B LTR ERVK 1 154 -307 9 883 441 0 0 0 chr13 39072604 39072653 -81211659 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 883 1313 225 89 35 chr13 39072653 39072933 -81211379 + RMER6B LTR ERVK 155 450 -11 9 883 501 109 0 68 chr13 39073175 39073293 -81211019 - Lx2A LINE L1 0 7008 6899 1 883 342 0 0 0 chr13 39073317 39073355 -81210957 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 883 967 83 0 0 chr13 39073355 39073488 -81210824 - B1_Mus1 SINE Alu -9 139 7 1 883 368 303 54 27 chr13 39074123 39074272 -81210040 - B3A SINE B2 -45 153 1 1 883 182 62 31 0 chr13 39074356 39074388 -81209924 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1 883 581 308 0 6 chr13 39074618 39074778 -81209534 + B3A SINE B2 2 160 -38 1 883 707 249 26 73 chr13 39075238 39075429 -81208883 + B3A SINE B2 1 182 -16 1 883 514 87 39 10 chr13 39075432 39075536 -81208776 + (CA)n Simple_repeat Simple_repeat 1 107 0 1 883 335 321 87 5 chr13 39075554 39075773 -81208539 + L1MEf LINE L1 1064 1300 -4900 1 883 26 30 0 0 chr13 39076016 39076049 -81208263 + AT_rich Low_complexity Low_complexity 1 33 0 1 883 249 283 19 57 chr13 39076341 39076446 -81207866 - PB1D10 SINE Alu -16 101 1 1 883 272 196 35 38 chr13 39076376 39076468 -81207844 - ID_B1 SINE B4 -72 152 70 1 883 463 169 24 0 chr13 39077961 39078044 -81206268 + B3A SINE B2 3 87 -111 1 883 328 167 2 101 chr13 39078058 39078157 -81206155 + L1MB7 LINE L1 5763 5854 -320 1 883 1302 202 121 30 chr13 39078179 39078518 -81205794 + MTD LTR MaLR 5 381 -38 1 883 2482 164 14 9 chr13 39078518 39078937 -81205375 + MTC LTR MaLR 1 421 0 1 883 1302 202 121 30 chr13 39078937 39078969 -81205343 + MTD LTR MaLR 382 410 -9 1 883 452 324 29 14 chr13 39079019 39079229 -81205083 + L1MB7 LINE L1 5903 6115 -69 1 883 719 213 0 0 chr13 39079388 39079515 -81204797 + B1_Mus2 SINE Alu 1 127 -20 1 883 403 170 20 0 chr13 39079765 39079865 -81204447 + (TA)n Simple_repeat Simple_repeat 1 102 0 1 883 282 29 0 0 chr13 39080321 39080356 -81203956 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 883 2393 44 0 20 chr13 39080391 39080695 -81203617 + L1Md_F3 LINE L1 6240 6537 -47 1 883 416 261 0 0 chr13 39080903 39080991 -81203321 - ORR1E LTR MaLR -139 220 133 1 883 208 216 0 20 chr13 39082255 39082354 -81201958 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 883 456 314 6 44 chr13 39082355 39082515 -81201797 - RSINE1 SINE B4 0 165 12 1 883 275 0 29 0 chr13 39085190 39085225 -81199087 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 883 2075 186 55 5 chr13 39085320 39085719 -81198593 - MTC LTR MaLR 0 421 3 1 883 182 33 67 0 chr13 39086048 39086078 -81198234 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1 883 2426 182 93 8 chr13 39086470 39086986 -81197326 - RMER15 LTR ERVL 0 575 16 1 883 25 0 0 0 chr13 39086987 39087012 -81197300 + AT_rich Low_complexity Low_complexity 1 25 0 1 883 544 226 116 0 chr13 39087712 39087876 -81196436 + B3A SINE B2 2 184 -14 1 883 459 0 0 0 chr13 39088182 39088233 -81196079 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 883 1216 281 57 24 chr13 39088299 39088752 -81195560 + Lx8 LINE L1 6840 7307 -166 1 883 466 262 182 13 chr13 39088760 39088996 -81195316 + Lx8 LINE L1 7196 7471 -2 1 883 338 298 114 16 chr13 39089320 39089511 -81194801 - L1MA6 LINE L1 -95 6205 5980 1 883 678 13 0 0 chr13 39090068 39090147 -81194165 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 883 450 0 0 0 chr13 39091103 39091153 -81193159 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 883 2673 96 84 0 chr13 39091409 39091815 -81192497 - Lx3_Mus LINE L1 -2 7007 6568 1 883 441 0 0 0 chr13 39091963 39092012 -81192300 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 883 527 298 32 121 chr13 39092353 39092666 -81191646 + B4A SINE B4 8 292 0 1 883 204 161 16 31 chr13 39092798 39092862 -81191450 + CT-rich Low_complexity Low_complexity 3 65 0 1 883 264 134 0 69 chr13 39092874 39092946 -81191366 + CT-rich Low_complexity Low_complexity 4 70 0 1 883 653 247 51 22 chr13 39093832 39094010 -81190302 + B3 SINE B2 34 216 0 1 883 797 277 56 110 chr13 39094591 39094964 -81189348 - MTE2a LTR MaLR 0 379 27 1 883 313 269 41 58 chr13 39096296 39096569 -81187743 + L1M5 LINE L1 3599 3866 -2280 1 883 417 274 77 50 chr13 39097089 39097404 -81186908 + L1M5 LINE L1 4317 4648 -1498 1 883 247 324 27 11 chr13 39097971 39098158 -81186154 + L1M5 LINE L1 5254 5443 -735 1 883 310 230 13 13 chr13 39098190 39098265 -81186047 + ID4 SINE ID 6 80 -3 1 883 282 355 0 36 chr13 39098850 39098961 -81185351 + L1MA10 LINE L1 6174 6280 -54 1 883 519 60 0 0 chr13 39099464 39099531 -81184781 + (T)n Simple_repeat Simple_repeat 1 67 0 1 883 3014 66 15 10 chr13 39099608 39100006 -81184306 - MTB LTR MaLR 0 400 1 1 883 1404 74 21 10 chr13 39100387 39100579 -81183733 - B2_Mm2 SINE B2 0 195 2 1 883 4158 25 2 18 chr13 39101787 39102282 -81182030 - L1Md_F2 LINE L1 0 6582 6096 1 883 278 270 125 16 chr13 39103269 39103397 -81180915 + B1F SINE Alu 1 142 -7 1 883 263 303 112 64 chr13 39103723 39104019 -81180293 - LTR41B LTR ERVL -448 310 1 1 883 270 280 80 0 chr13 39104463 39104502 -81179810 - BC1_Mm scRNA scRNA -41 111 65 1 883 4040 70 4 28 chr13 39104502 39105046 -81179266 + L1Md_F2 LINE L1 6046 6576 -6 1 883 324 211 0 0 chr13 39105046 39105103 -81179209 - tRNA-Ala-GCG tRNA tRNA -18 57 1 1 883 723 198 147 5 chr13 39106060 39106258 -81178054 + URR1A DNA MER1_type 1 226 0 1 883 455 313 20 20 chr13 39106748 39106898 -81177414 + RSINE1 SINE B4 3 152 -13 1 883 285 75 0 0 chr13 39106953 39106993 -81177319 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 883 1196 106 0 19 chr13 39108184 39108443 -81175869 + (CA)n Simple_repeat Simple_repeat 1 254 0 1 883 216 135 0 0 chr13 39109051 39109088 -81175224 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1 883 239 87 21 42 chr13 39109952 39110000 -81174312 - PB1D10 SINE Alu 0 117 71 1 883 367 289 33 56 chr13 39110582 39110829 -81173483 - MTEa LTR MaLR 0 379 146 1 883 3113 48 19 5 chr13 39111377 39111752 -81172560 + L1Md_F2 LINE L1 6197 6576 -6 1 883 180 231 0 0 chr13 39111806 39111858 -81172454 + A-rich Low_complexity Low_complexity 1 52 0 1 883 225 94 0 0 chr13 39111988 39112020 -81172292 + (TCG)n Simple_repeat Simple_repeat 2 33 0 1 883 303 296 9 18 chr13 39112044 39112154 -81172158 + Ricksha_c DNA MuDR 356 464 -1584 1 883 276 367 37 31 chr13 39113276 39113625 -81170687 - L1ME2 LINE L1 -7 6157 5807 1 883 228 286 32 0 chr13 39113659 39113722 -81170590 - B4 SINE B4 -221 71 7 1 883 524 346 0 11 chr13 39113776 39113957 -81170355 - B3A SINE B2 -18 180 2 1 883 297 0 0 0 chr13 39113973 39114006 -81170306 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 883 334 304 98 0 chr13 39114006 39114108 -81170204 - PB1 SINE Alu -9 118 7 1 883 186 209 0 0 chr13 39114431 39114474 -81169838 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 883 603 0 0 0 chr13 39114475 39114542 -81169770 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 1 883 908 141 23 0 chr13 39114547 39114675 -81169637 - B1_Mur4 SINE Alu -19 131 1 1 883 450 36 0 0 chr13 39114828 39114884 -81169428 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 883 1383 0 16 33 chr13 39115169 39115352 -81168960 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 1 883 331 326 8 30 chr13 39115918 39116051 -81168261 + L1MCc LINE L1 1093 1222 -5201 1 883 1415 266 71 3 chr13 39116548 39116898 -81167414 + MTD LTR MaLR 46 419 0 1 883 315 0 0 0 chr13 39116907 39116942 -81167370 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 883 204 97 0 0 chr13 39117092 39117123 -81167189 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 883 324 0 0 0 chr13 39117141 39117177 -81167135 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 883 224 79 53 0 chr13 39117260 39117298 -81167014 + (TTCTCC)n Simple_repeat Simple_repeat 3 42 0 1 883 283 333 0 12 chr13 39117449 39117531 -81166781 + PB1D10 SINE Alu 26 106 -11 1 883 1324 318 121 53 chr13 39117633 39118288 -81166024 - MER21B LTR ERV1 -90 773 75 1 883 280 287 86 59 chr13 39119195 39119347 -81164965 - MTEb LTR MaLR -15 364 209 1 883 248 177 150 12 chr13 39120222 39120302 -81164010 + Lx8 LINE L1 7383 7473 0 1 883 23 0 0 0 chr13 39120960 39120983 -81163329 + AT_rich Low_complexity Low_complexity 1 23 0 1 883 1003 267 66 90 chr13 39121751 39122117 -81162195 + ORR1E LTR MaLR 1 357 -2 1 883 2200 98 18 15 chr13 39122295 39122635 -81161677 - RLTR9A LTR ERVK -27 341 1 1 883 186 227 21 64 chr13 39123353 39123400 -81160912 - MIRm SINE MIR -196 80 36 1 883 23 54 0 0 chr13 39124032 39124069 -81160243 + AT_rich Low_complexity Low_complexity 1 37 0 1 883 829 348 63 3 chr13 39124577 39124671 -81159641 - Lx8 LINE L1 -31 7442 7339 1 883 216 0 0 0 chr13 39124671 39124695 -81159617 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 883 829 348 63 3 chr13 39124695 39124980 -81159332 - Lx8 LINE L1 -135 7338 7041 1 883 198 100 19 57 chr13 39125329 39125382 -81158930 + T-rich Low_complexity Low_complexity 4 54 0 1 883 285 29 0 0 chr13 39125464 39125498 -81158814 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 883 1103 82 0 58 chr13 39126554 39126710 -81157602 - B1_Mus2 SINE Alu 0 147 1 1 883 321 117 0 0 chr13 39127064 39127124 -81157188 + (TCTG)n Simple_repeat Simple_repeat 3 62 0 1 883 3901 170 63 15 chr13 39127343 39127709 -81156603 - RMER6D LTR ERVK 0 720 357 1 883 396 0 0 0 chr13 39127709 39127753 -81156559 + (CCA)n Simple_repeat Simple_repeat 1 44 0 1 883 3901 170 63 15 chr13 39127753 39128071 -81156241 - RMER6D LTR ERVK -364 356 3 1 883 255 61 0 0 chr13 39128200 39128233 -81156079 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 1 883 274 242 0 29 chr13 39128650 39128701 -81155611 - URR1B DNA MER1_type 0 225 175 1 883 3272 26 2 120 chr13 39128701 39129143 -81155169 + RLTR10 LTR ERVK 1 390 0 1 883 274 242 0 29 chr13 39129143 39129159 -81155153 - URR1B DNA MER1_type -51 174 160 1 883 16595 31 9 2 chr13 39129159 39131083 -81153229 + RLTR10-int LTR ERVK 47 1984 -3 2 883 3088 28 2 183 chr13 39131085 39131561 -81152751 + RLTR10 LTR ERVK 1 390 0 2 883 474 88 0 48 chr13 39131561 39131645 -81152667 - URR1B DNA MER1_type -45 180 101 1 883 262 220 62 52 chr13 39131645 39131657 -81152655 + CYRA11_Mm Unknown Y-chromosome 220 316 -301 2 883 329 290 125 89 chr13 39131705 39132065 -81152247 - MLT1A LTR MaLR 0 374 2 2 883 245 289 36 63 chr13 39132326 39132437 -81151875 - L1M5 LINE L1 -465 5659 5552 2 883 423 38 0 0 chr13 39132721 39132774 -81151538 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 883 234 0 0 0 chr13 39133306 39133332 -81150980 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2 883 234 62 0 0 chr13 39133377 39133409 -81150903 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 883 816 295 69 62 chr13 39133444 39133733 -81150579 + B4 SINE B4 2 292 0 2 883 1584 169 199 6 chr13 39133772 39133955 -81150357 + ORR1C2 LTR MaLR 1 214 -170 2 883 210 91 0 0 chr13 39133955 39133988 -81150324 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 2 883 1584 169 199 6 chr13 39133988 39134126 -81150186 + ORR1C2 LTR MaLR 215 384 0 2 883 5126 232 60 33 chr13 39134136 39135461 -81148851 + ORR1C2-int LTR MaLR 10 1370 0 2 883 1870 210 8 45 chr13 39135461 39135678 -81148634 + ORR1C2 LTR MaLR 1 212 -172 2 883 203 61 0 29 chr13 39135678 39135712 -81148600 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 2 883 1870 210 8 45 chr13 39135712 39135893 -81148419 + ORR1C2 LTR MaLR 213 384 0 2 883 261 0 0 0 chr13 39135914 39135943 -81148369 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 883 1151 219 40 22 chr13 39136121 39136396 -81147916 - Lx9 LINE L1 -8 7636 7357 2 883 1656 220 30 25 chr13 39136374 39136738 -81147574 + Lx9 LINE L1 6373 6738 -906 2 883 4896 178 63 23 chr13 39137841 39138713 -81145599 - RMER13B LTR ERVK 0 908 2 2 883 250 349 73 0 chr13 39140051 39140160 -81144152 - PB1D10 SINE Alu 0 117 1 2 883 569 262 7 37 chr13 39140290 39140425 -81143887 + B1F2 SINE Alu 11 141 -8 2 883 220 376 104 8 chr13 39140435 39140569 -81143743 - MIRb SINE MIR -1 267 121 2 883 786 70 0 0 chr13 39140787 39140901 -81143411 + (GA)n Simple_repeat Simple_repeat 1 114 0 2 883 836 311 33 4 chr13 39141511 39141753 -81142559 - B4A SINE B4 -43 249 1 2 883 42198 5 0 1 chr13 39141800 39148566 -81135746 - L1Md_A LINE L1 0 6582 1 2 883 189 0 0 0 chr13 39148579 39148600 -81135712 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 2 883 407 179 16 8 chr13 39148740 39148837 -81135475 - PB1D9 SINE Alu 0 149 49 2 883 216 0 228 0 chr13 39151236 39151315 -81132997 + (CAAGG)n Simple_repeat Simple_repeat 2 98 0 2 883 248 53 26 0 chr13 39152375 39152413 -81131899 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 883 22 0 0 0 chr13 39152907 39152929 -81131383 + AT_rich Low_complexity Low_complexity 1 22 0 2 883 461 287 161 45 chr13 39153143 39153479 -81130833 - MLT1J1-int LTR MaLR -381 1006 632 2 883 350 366 62 0 chr13 39153651 39153845 -81130467 - MLT1J1-int LTR MaLR -1010 377 172 2 883 252 284 15 0 chr13 39154011 39154078 -81130234 - MLT1J1 LTR MaLR -32 412 345 2 883 1139 294 136 25 chr13 39154107 39154733 -81129579 - MER44C DNA MER2_type -137 596 8 2 883 299 182 130 0 chr13 39157031 39157108 -81127204 + Lx7 LINE L1 7592 7678 -18 2 883 998 158 189 5 chr13 39157199 39157390 -81126922 + URR1A DNA MER1_type 1 226 0 2 883 766 268 123 107 chr13 39159573 39160004 -81124308 - RMER1A Other Other -501 529 92 2 883 728 291 82 46 chr13 39161766 39162047 -81122265 - B4A SINE B4 0 292 2 2 883 1990 185 8 22 chr13 39162613 39162983 -81121329 + ORR1B2 LTR MaLR 1 365 -2 2 883 3979 172 95 33 chr13 39163545 39164299 -81120013 + Lx9 LINE L1 6710 7508 -136 2 883 357 24 0 0 chr13 39164299 39164341 -81119971 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 883 3979 172 95 33 chr13 39164341 39164463 -81119849 + Lx9 LINE L1 7509 7639 -5 2 883 831 252 139 31 chr13 39164630 39164954 -81119358 - ORR1E LTR MaLR 0 359 1 2 883 323 33 32 48 chr13 39165290 39165353 -81118959 + (CAAAA)n Simple_repeat Simple_repeat 4 65 0 2 883 1268 210 47 20 chr13 39166096 39166392 -81117920 - MER121 Unknown Unknown -100 312 9 2 883 180 0 0 0 chr13 39167237 39167257 -81117055 + (A)n Simple_repeat Simple_repeat 1 20 0 2 883 582 15 0 0 chr13 39167257 39167324 -81116988 + (GGGAA)n Simple_repeat Simple_repeat 4 70 0 2 883 335 303 37 56 chr13 39167342 39167490 -81116822 - ORR1E LTR MaLR -231 143 1 2 883 431 101 13 0 chr13 39167542 39167621 -81116691 + (TG)n Simple_repeat Simple_repeat 2 81 0 2 883 655 233 17 0 chr13 39167621 39167741 -81116571 - RSINE1 SINE B4 -41 124 3 2 883 298 328 77 57 chr13 39168888 39169134 -81115178 + L2c LINE L2 3137 3387 0 2 883 571 257 133 6 chr13 39170323 39170478 -81113834 + B3 SINE B2 1 164 -52 2 883 567 0 0 0 chr13 39170478 39170541 -81113771 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 883 571 257 133 6 chr13 39170541 39170565 -81113747 + B3 SINE B2 165 203 -13 2 883 39 22 0 0 chr13 39171941 39171987 -81112325 + AT_rich Low_complexity Low_complexity 1 46 0 2 883 1428 298 85 20 chr13 39172012 39172601 -81111711 - Lx8 LINE L1 -163 7310 6684 2 883 34 79 0 0 chr13 39172610 39172686 -81111626 + AT_rich Low_complexity Low_complexity 1 76 0 2 883 1274 280 59 42 chr13 39172712 39173186 -81111126 - Lx8 LINE L1 -795 6678 6197 2 883 696 101 47 12 chr13 39173216 39173386 -81110926 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 2 883 553 36 36 0 chr13 39173429 39173512 -81110800 + (TCTA)n Simple_repeat Simple_repeat 4 89 0 2 883 234 380 87 87 chr13 39174117 39174544 -81109768 - MLT1K LTR MaLR -165 430 4 2 883 1026 247 127 10 chr13 39174974 39175273 -81109039 - MTEa LTR MaLR -45 334 1 2 883 353 333 60 13 chr13 39175558 39175707 -81108605 + MIR3 SINE MIR 49 204 -4 2 883 510 214 0 74 chr13 39176969 39177090 -81107222 + PB1D9 SINE Alu 3 114 -6 2 883 27 29 0 0 chr13 39177285 39177319 -81106993 + AT_rich Low_complexity Low_complexity 1 34 0 2 883 701 183 0 17 chr13 39177325 39177442 -81106870 + B1_Mus1 SINE Alu 24 138 -10 2 883 522 0 0 0 chr13 39177442 39177500 -81106812 + (CAA)n Simple_repeat Simple_repeat 2 59 0 2 883 189 0 0 0 chr13 39178586 39178607 -81105705 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 883 553 244 72 16 chr13 39178607 39178732 -81105580 - B3A SINE B2 -50 148 17 2 883 1689 180 32 95 chr13 39179379 39179791 -81104521 + ORR1B1 LTR MaLR 1 386 -8 2 883 258 336 17 17 chr13 39180829 39180944 -81103368 - PB1D10 SINE Alu 0 117 3 2 883 279 0 0 0 chr13 39182788 39182819 -81101493 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 883 363 160 0 0 chr13 39182819 39182913 -81101399 + GA-rich Low_complexity Low_complexity 1 94 0 2 883 759 144 0 0 chr13 39182918 39183085 -81101227 + (GA)n Simple_repeat Simple_repeat 2 168 0 2 883 449 254 94 8 chr13 39183615 39183742 -81100570 + B1F SINE Alu 2 139 -10 2 883 982 108 6 17 chr13 39184313 39184491 -81099821 + (TCTCCC)n Simple_repeat Simple_repeat 3 178 0 2 883 404 299 18 34 chr13 39184847 39185041 -81099271 + L1MA5 LINE L1 5808 6008 -292 2 883 230 308 68 34 chr13 39185839 39185987 -81098325 + Kanga11a DNA Tc2 769 921 -49 2 883 217 289 0 0 chr13 39186256 39186308 -81098004 + CT-rich Low_complexity Low_complexity 3 54 0 2 883 243 159 45 0 chr13 39186402 39186446 -81097866 - L3b LINE CR1 -116 366 321 2 883 378 247 0 0 chr13 39186955 39187036 -81097276 - ID4 SINE ID -2 81 1 2 883 26 50 0 0 chr13 39187414 39187454 -81096858 + AT_rich Low_complexity Low_complexity 1 40 0 2 883 271 268 124 16 chr13 39187957 39188086 -81096226 - Tigger7 DNA MER2_type -77 2414 2272 2 883 691 327 28 16 chr13 39188103 39188358 -81095954 - Tigger7 DNA MER2_type -2226 265 8 2 883 515 95 0 21 chr13 39188366 39188463 -81095849 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 2 883 257 155 28 0 chr13 39189256 39189327 -81094985 + (TCTCTG)n Simple_repeat Simple_repeat 6 78 0 2 883 1158 122 0 0 chr13 39190340 39190520 -81093792 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2 884 197 347 141 13 chr13 39192263 39192412 -81091900 - MIRb SINE MIR -59 209 42 2 884 266 357 0 0 chr13 39192457 39192555 -81091757 + Lx7 LINE L1 7215 7312 -384 2 884 26 0 0 0 chr13 39192680 39192706 -81091606 + AT_rich Low_complexity Low_complexity 1 26 0 2 884 573 15 0 0 chr13 39192968 39193034 -81091278 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 884 522 300 165 43 chr13 39193114 39193368 -81090944 - B4A SINE B4 0 292 8 2 884 347 343 27 35 chr13 39195099 39195250 -81089062 + MLT1G1 LTR MaLR 276 425 -170 2 884 312 227 0 11 chr13 39195417 39195506 -81088806 + (TCTCTG)n Simple_repeat Simple_repeat 3 90 0 2 884 249 325 81 63 chr13 39195509 39195732 -81088580 + MTEb LTR MaLR 148 375 -4 2 884 428 251 174 37 chr13 39197693 39197883 -81086429 - B3 SINE B2 0 216 1 2 884 26 0 0 0 chr13 39197990 39198016 -81086296 + AT_rich Low_complexity Low_complexity 1 26 0 2 884 725 372 25 20 chr13 39198046 39198402 -81085910 - MLT1A0 LTR MaLR -7 358 1 2 884 621 146 30 13 chr13 39198404 39198541 -81085771 + Lx3B LINE L1 6780 6936 -73 2 884 240 235 97 35 chr13 39198982 39199076 -81085236 - MIRc SINE MIR -109 167 64 2 884 259 323 48 0 chr13 39199339 39199463 -81084849 - Arthur1B DNA Tip100 -8 1217 1088 2 884 447 320 190 12 chr13 39199552 39199799 -81084513 + ORR1E LTR MaLR 44 334 -25 2 884 412 300 51 45 chr13 39201588 39201745 -81082567 - MER3 DNA MER1_type 0 209 52 2 884 4007 55 0 17 chr13 39201926 39202444 -81081868 - L1Md_F2 LINE L1 0 6582 6074 2 884 325 177 241 26 chr13 39202890 39203006 -81081306 + MTD LTR MaLR 3 143 -276 2 884 978 78 0 7 chr13 39204311 39204452 -81079860 + L1Md_F2 LINE L1 5462 5586 -297 2 884 8146 42 2 3 chr13 39204452 39205437 -81078875 + L1Md_F2 LINE L1 5587 6570 -12 2 884 378 257 36 54 chr13 39206129 39206240 -81078072 + PB1D10 SINE Alu 9 117 0 2 884 203 179 26 0 chr13 39206262 39206301 -81078011 + GA-rich Low_complexity Low_complexity 6 45 0 2 884 426 20 0 0 chr13 39206406 39206457 -81077855 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 2 884 22 88 0 0 chr13 39207329 39207386 -81076926 + AT_rich Low_complexity Low_complexity 1 57 0 2 884 476 343 78 32 chr13 39207603 39207886 -81076426 - MTEa LTR MaLR -13 366 71 2 884 228 291 106 50 chr13 39207983 39208124 -81076188 + LTR75 LTR ERVL 190 338 -224 3 884 530 259 35 43 chr13 39208675 39208816 -81075496 + RSINE1 SINE B4 5 144 -21 3 884 25 0 0 0 chr13 39208905 39208930 -81075382 + AT_rich Low_complexity Low_complexity 1 25 0 3 884 390 91 0 0 chr13 39209215 39209270 -81075042 + (ATG)n Simple_repeat Simple_repeat 2 56 0 3 884 560 309 71 0 chr13 39210439 39210607 -81073705 - MER58B DNA MER1_type -3 338 159 3 884 862 170 160 12 chr13 39211302 39211546 -81072766 - Lx9 LINE L1 -7 7637 7358 3 884 189 107 0 0 chr13 39212214 39212242 -81072070 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 3 884 1502 221 6 29 chr13 39212243 39212592 -81071720 - Lx5 LINE L1 0 7050 6710 3 884 489 283 77 84 chr13 39212695 39212992 -81071320 - MLT1B LTR MaLR -13 377 83 3 884 378 0 0 0 chr13 39213566 39213608 -81070704 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 884 492 68 0 0 chr13 39213608 39213681 -81070631 + (CAGAGA)n Simple_repeat Simple_repeat 2 74 0 3 884 262 351 60 105 chr13 39215444 39215797 -81068515 - L2b LINE L2 -10 3377 3041 3 884 333 303 102 63 chr13 39215866 39216087 -81068225 + MLT1A LTR MaLR 12 230 -135 3 884 289 218 59 144 chr13 39216370 39216488 -81067824 + MLT1A LTR MaLR 254 361 -13 3 884 1680 307 85 12 chr13 39216583 39217423 -81066889 + Lx9 LINE L1 6538 7438 -206 3 884 27 0 0 0 chr13 39217547 39217574 -81066738 + AT_rich Low_complexity Low_complexity 1 27 0 3 884 1140 88 70 6 chr13 39217936 39218108 -81066204 - L1_Mus1 LINE L1 0 6567 6385 3 884 317 252 213 25 chr13 39218188 39218310 -81066002 + B1F SINE Alu 1 145 -4 3 884 556 333 25 36 chr13 39218371 39218535 -81065777 + B3A SINE B2 5 169 -29 3 884 198 71 0 0 chr13 39218535 39218563 -81065749 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 884 556 333 25 36 chr13 39218563 39218594 -81065718 + B3A SINE B2 170 198 0 3 884 335 60 0 20 chr13 39218618 39218669 -81065643 + (TAAAA)n Simple_repeat Simple_repeat 1 50 0 3 884 4673 108 34 37 chr13 39218893 39219659 -81064653 + Lx3B LINE L1 6206 6969 -4 3 884 6111 154 60 1 chr13 39219997 39221048 -81063264 + Lx2B LINE L1 5881 6993 -7 3 884 37021 32 5 7 chr13 39222043 39228009 -81056303 - L1Md_F2 LINE L1 0 6582 642 3 884 712 219 47 47 chr13 39228810 39229064 -81055248 - L1MA8 LINE L1 -14 6277 6024 3 884 735 211 0 0 chr13 39229483 39229611 -81054701 - B1_Mus1 SINE Alu -6 142 15 3 884 245 295 29 116 chr13 39229512 39229650 -81054662 - MT2B LTR ERVL -337 264 139 3 884 593 90 0 11 chr13 39230207 39230297 -81054015 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 3 884 396 235 12 0 chr13 39230378 39230459 -81053853 - ID SINE ID -142 82 1 3 884 497 288 59 31 chr13 39231234 39231524 -81052788 - L1MA8 LINE L1 -80 6211 5914 3 884 495 0 0 0 chr13 39231669 39231724 -81052588 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 884 300 364 83 49 chr13 39232753 39233102 -81051210 + MLT1A0 LTR MaLR 3 363 -2 3 884 1196 68 0 0 chr13 39233283 39233430 -81050882 + B1_Mm SINE Alu 1 147 0 3 884 1161 293 12 43 chr13 39233495 39233820 -81050492 + MTE2a LTR MaLR 58 372 -7 3 884 441 0 0 0 chr13 39233857 39233906 -81050406 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 884 233 260 154 51 chr13 39237365 39237511 -81046801 - MIRb SINE MIR -89 187 27 3 884 2916 207 80 28 chr13 39239253 39240017 -81044295 + Lx9 LINE L1 6839 7642 -2 3 884 6278 69 87 28 chr13 39240024 39240277 -81044035 - L1_Mus3 LINE L1 -4 6634 6380 3 884 258 32 0 0 chr13 39240277 39240308 -81044004 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 884 6278 94 46 15 chr13 39240308 39241709 -81042603 - L1_Mus3 LINE L1 -259 6379 4923 3 884 663 172 0 18 chr13 39242228 39242394 -81041918 + (TG)n Simple_repeat Simple_repeat 2 164 0 3 884 681 312 32 96 chr13 39242416 39242434 -81041878 - B4A SINE B4 -1 291 274 3 884 1349 45 0 11 chr13 39242434 39242612 -81041700 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 3 884 681 312 32 96 chr13 39242612 39242873 -81041439 - B4A SINE B4 -19 273 30 3 884 256 234 47 0 chr13 39243028 39243092 -81041220 - tRNA-Ala-GCY_ tRNA tRNA -7 68 2 3 884 749 11 11 0 chr13 39243327 39243417 -81040895 + (CAGG)n Simple_repeat Simple_repeat 2 92 0 3 884 792 240 115 0 chr13 39244308 39244508 -81039804 - URR1A DNA MER1_type -2 224 2 3 884 862 141 13 0 chr13 39246398 39246554 -81037758 + GA-rich Low_complexity Low_complexity 3 160 0 3 884 857 298 65 5 chr13 39246585 39247076 -81037236 + L1MA6 LINE L1 5675 6197 -103 3 884 508 118 10 10 chr13 39247166 39247269 -81037043 + Lx LINE L1 6550 6652 -2 3 884 364 326 43 0 chr13 39247301 39247393 -81036919 + B1F SINE Alu 1 96 -53 3 884 246 385 37 28 chr13 39247393 39247407 -81036905 + ID_B1 SINE B4 82 188 -36 3 884 465 268 30 65 chr13 39247439 39247666 -81036646 + MLT1A LTR MaLR 178 385 -5 3 884 344 22 0 22 chr13 39247716 39247762 -81036550 + (TTCC)n Simple_repeat Simple_repeat 1 45 0 3 884 3633 150 28 23 chr13 39247769 39248419 -81035893 - Lx LINE L1 -18 6636 5984 3 884 312 83 0 0 chr13 39248427 39248475 -81035837 + MusHAL1 LINE L1 147 194 -2518 3 884 745 285 0 68 chr13 39249273 39249450 -81034862 + B3A SINE B2 1 169 -29 3 884 351 96 0 0 chr13 39249450 39249502 -81034810 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 884 745 285 0 68 chr13 39249502 39249531 -81034781 + B3A SINE B2 170 193 -5 3 884 196 250 0 0 chr13 39250287 39250323 -81033989 + MIR SINE MIR 42 77 -131 3 884 405 0 0 0 chr13 39251211 39251256 -81033056 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 884 265 317 84 76 chr13 39252339 39252564 -81031748 - L2 LINE L2 -925 2494 2268 3 884 206 314 0 0 chr13 39253766 39253817 -81030495 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 884 425 309 123 24 chr13 39253972 39254224 -81030088 - LTR16B1 LTR ERVL -167 313 37 3 884 189 330 142 0 chr13 39254440 39254546 -81029766 - L2b LINE L2 -50 3325 3205 3 884 384 335 213 0 chr13 39254710 39254949 -81029363 + MER2 DNA MER2_type 8 297 -48 3 884 1434 80 0 0 chr13 39255188 39255516 -81028796 + (CA)n Simple_repeat Simple_repeat 1 328 0 3 884 1373 97 32 9 chr13 39255865 39256083 -81028229 - Lx2 LINE L1 0 6997 6775 3 884 2718 82 20 3 chr13 39256080 39256470 -81027842 - Lx2 LINE L1 -351 6646 6250 3 884 440 364 65 33 chr13 39256788 39257095 -81027217 - LTR53 LTR ERVL -14 505 189 3 884 469 277 14 21 chr13 39259053 39259197 -81025115 + Lx7 LINE L1 7130 7272 -424 3 884 204 242 30 0 chr13 39259218 39259284 -81025028 + T-rich Low_complexity Low_complexity 4 71 0 3 884 228 195 56 33 chr13 39259292 39259382 -81024930 + Lx8 LINE L1 7353 7444 -29 3 884 377 340 14 0 chr13 39259436 39259577 -81024735 + RSINE1 SINE B4 5 147 -18 3 884 282 56 0 0 chr13 39259603 39259639 -81024673 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 884 441 0 0 0 chr13 39259639 39259687 -81024625 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 884 622 300 58 102 chr13 39259913 39260277 -81024035 - ORR1E LTR MaLR -6 353 6 3 884 315 177 0 0 chr13 39260895 39260957 -81023355 + T-rich Low_complexity Low_complexity 1 62 0 3 884 436 338 110 20 chr13 39261888 39262133 -81022179 + MLT1H LTR MaLR 24 290 -259 3 884 254 267 171 0 chr13 39262210 39262258 -81022054 - Tigger7 DNA MER2_type -63 2428 2373 3 884 387 0 0 0 chr13 39262258 39262301 -81022011 + (CATA)n Simple_repeat Simple_repeat 4 46 0 3 884 254 267 171 0 chr13 39262301 39262398 -81021914 - Tigger7 DNA MER2_type -119 2372 2259 3 884 1730 36 39 39 chr13 39262687 39262920 -81021392 - L1Md_F2 LINE L1 -12 6570 6338 3 884 539 112 0 11 chr13 39264779 39264869 -81019443 + (TCC)n Simple_repeat Simple_repeat 3 91 0 3 884 270 0 0 0 chr13 39266437 39266467 -81017845 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 884 1639 205 69 32 chr13 39266472 39266876 -81017436 + MTC LTR MaLR 1 419 -2 3 884 1044 288 82 48 chr13 39266928 39267282 -81017030 + ORR1D2 LTR MaLR 1 366 -4 3 884 409 319 38 40 chr13 39268233 39268444 -81015868 - MTE2a LTR MaLR -7 372 144 3 884 244 341 134 38 chr13 39268446 39268684 -81015628 - L2 LINE L2 -1761 1658 1398 3 884 622 105 19 0 chr13 39270783 39270888 -81013424 + (TC)n Simple_repeat Simple_repeat 1 107 0 3 884 272 176 20 0 chr13 39273129 39273180 -81011132 + MER5A DNA MER1_type 46 97 -92 3 884 1617 164 92 26 chr13 39273188 39273494 -81010818 + MTC LTR MaLR 10 335 -86 3 884 303 93 0 0 chr13 39275161 39275204 -81009108 + (CCAA)n Simple_repeat Simple_repeat 3 45 0 3 884 574 225 22 0 chr13 39277227 39277365 -81006947 + B1F SINE Alu 1 141 -8 3 884 21 0 0 0 chr13 39277576 39277597 -81006715 + AT_rich Low_complexity Low_complexity 1 21 0 3 884 928 188 0 34 chr13 39277859 39278088 -81006224 - L1Md_A LINE L1 0 6582 6381 3 884 396 335 102 67 chr13 39278155 39278588 -81005724 - MLT2B4 LTR ERVL -24 543 18 3 884 220 196 0 80 chr13 39279194 39279244 -81005068 + L2a LINE L2 3329 3374 -52 3 884 1088 293 21 37 chr13 39279384 39279763 -81004549 + MTEa LTR MaLR 5 377 -2 3 884 21 0 0 0 chr13 39280001 39280022 -81004290 + AT_rich Low_complexity Low_complexity 1 21 0 3 884 495 327 19 0 chr13 39280514 39280670 -81003642 + B4A SINE B4 15 173 -119 3 884 249 312 78 0 chr13 39281097 39281174 -81003138 + ID4 SINE ID 1 83 0 3 884 202 322 57 73 chr13 39281494 39281618 -81002694 + MIR3 SINE MIR 40 161 -47 3 884 687 94 52 17 chr13 39281802 39281976 -81002336 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 884 263 371 18 30 chr13 39282499 39282663 -81001649 + MIRb SINE MIR 60 221 -47 3 884 204 200 50 10 chr13 39283013 39283114 -81001198 + (TG)n Simple_repeat Simple_repeat 2 106 0 3 884 357 208 47 6 chr13 39283156 39283325 -81000987 + (TG)n Simple_repeat Simple_repeat 2 177 0 3 884 202 160 45 45 chr13 39283363 39283520 -81000792 + (TG)n Simple_repeat Simple_repeat 2 158 0 3 884 449 135 31 23 chr13 39283566 39283695 -81000617 + (TG)n Simple_repeat Simple_repeat 1 130 0 3 884 297 364 23 8 chr13 39283999 39284129 -81000183 - Tigger5 DNA MER2_type -2243 163 32 4 884 480 35 0 0 chr13 39284195 39284253 -81000059 + (TAG)n Simple_repeat Simple_repeat 2 59 0 4 884 235 96 0 37 chr13 39284802 39284856 -80999456 + (CAAAAA)n Simple_repeat Simple_repeat 2 53 0 4 884 280 225 78 21 chr13 39285577 39285718 -80998594 + Lx9 LINE L1 7478 7626 -18 4 884 35 0 0 0 chr13 39285735 39285770 -80998542 + AT_rich Low_complexity Low_complexity 1 35 0 4 884 282 335 53 17 chr13 39286143 39286321 -80997991 + MIR SINE MIR 34 222 -46 4 884 325 274 118 0 chr13 39286348 39286450 -80997862 + MER5A DNA MER1_type 13 126 -63 4 884 192 40 0 0 chr13 39286662 39286687 -80997625 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 884 213 367 0 60 chr13 39286839 39286955 -80997357 - MIRc SINE MIR -142 126 18 4 884 564 122 23 4 chr13 39287204 39287301 -80997011 - RMER19A LTR ERVK 0 737 661 4 884 1440 147 169 22 chr13 39287296 39287574 -80996738 + RMER19A LTR ERVK 251 569 -168 4 884 1605 273 65 53 chr13 39287572 39288175 -80996137 - MTD-int LTR MaLR -51 1207 598 4 884 464 254 40 24 chr13 39288188 39288313 -80995999 - MTD-int LTR MaLR -1243 127 1 4 884 1495 247 58 5 chr13 39288313 39288711 -80995601 - MTD LTR MaLR 0 419 1 4 884 278 306 80 18 chr13 39290923 39291036 -80993276 - PB1D7 SINE Alu 0 120 1 4 884 711 62 0 0 chr13 39291269 39291366 -80992946 + (CCA)n Simple_repeat Simple_repeat 1 97 0 4 884 693 242 14 82 chr13 39292207 39292375 -80991937 + B3A SINE B2 1 161 -37 4 884 1902 182 45 5 chr13 39292375 39292751 -80991561 + ORR1B1 LTR MaLR 1 391 -3 4 884 693 242 14 82 chr13 39292751 39292789 -80991523 + B3A SINE B2 162 193 -5 4 884 265 174 21 11 chr13 39295202 39295295 -80989017 + (CAGAGA)n Simple_repeat Simple_repeat 3 96 0 4 884 229 163 61 0 chr13 39295783 39295832 -80988480 - Charlie4 DNA MER1_type -1464 497 446 4 884 531 305 107 0 chr13 39295999 39296130 -80988182 + RSINE1 SINE B4 1 145 -20 4 884 2002 182 13 8 chr13 39296136 39296508 -80987804 + ORR1C1 LTR MaLR 2 375 -3 4 884 21 0 0 0 chr13 39297019 39297040 -80987272 + AT_rich Low_complexity Low_complexity 1 21 0 4 884 795 175 0 0 chr13 39297927 39298198 -80986114 + (TG)n Simple_repeat Simple_repeat 1 271 0 4 884 210 105 0 0 chr13 39300266 39300304 -80984008 + (T)n Simple_repeat Simple_repeat 1 38 0 4 884 342 0 0 0 chr13 39300481 39300519 -80983793 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 884 630 306 32 45 chr13 39300737 39300983 -80983329 + MLT1A0 LTR MaLR 74 316 -49 4 884 209 133 67 0 chr13 39302219 39302279 -80982033 + (TTATA)n Simple_repeat Simple_repeat 2 65 0 4 884 203 246 47 16 chr13 39302360 39302488 -80981824 + (TATAA)n Simple_repeat Simple_repeat 2 133 0 4 884 585 0 0 0 chr13 39303414 39303479 -80980833 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 884 433 268 174 37 chr13 39303984 39304282 -80980030 + L1M4 LINE L1 3537 3875 -2265 4 884 1582 175 71 184 chr13 39304450 39305038 -80979274 - RLTR28 LTR ERVL -2 522 1 4 884 638 322 70 8 chr13 39305220 39305400 -80978912 + B3A SINE B2 6 186 -30 4 884 27 49 0 0 chr13 39305462 39305503 -80978809 + AT_rich Low_complexity Low_complexity 1 41 0 4 884 315 242 30 0 chr13 39305507 39305573 -80978739 - ID4_ SINE ID -13 70 3 4 884 576 232 75 3 chr13 39305590 39305918 -80978394 + L1M4 LINE L1 5094 5447 -731 4 884 592 100 140 0 chr13 39305923 39306023 -80978289 - Lx LINE L1 -350 6304 6191 4 884 2208 104 38 23 chr13 39306023 39306369 -80977943 + Lx LINE L1 6296 6646 -8 4 884 321 314 120 13 chr13 39306435 39306593 -80977719 + L1M4 LINE L1 5440 5614 -564 4 884 541 351 104 31 chr13 39306775 39307101 -80977211 - MT2A LTR ERVL -183 350 1 4 884 284 271 126 22 chr13 39307102 39307325 -80976987 + L1M4 LINE L1 5613 5858 -326 4 884 375 200 48 48 chr13 39307416 39307500 -80976812 - B1F SINE Alu -51 98 15 4 884 644 320 83 118 chr13 39307517 39308272 -80976040 - Tigger6a DNA MER2_type -340 743 15 4 884 495 0 0 0 chr13 39308272 39308327 -80975985 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 884 673 324 44 55 chr13 39308652 39308926 -80975386 + B4A SINE B4 1 271 -21 4 884 363 78 0 0 chr13 39309822 39309873 -80974439 + (GGA)n Simple_repeat Simple_repeat 1 51 0 4 884 389 241 62 0 chr13 39310014 39310126 -80974186 - RMER15 LTR ERVL -2 573 455 4 884 269 339 60 79 chr13 39310511 39310750 -80973562 + ORR1D2 LTR MaLR 8 243 -141 4 884 711 328 43 32 chr13 39311535 39311812 -80972500 - B4A SINE B4 -12 280 1 4 884 1357 294 9 19 chr13 39314254 39314683 -80969629 + Lx8 LINE L1 6261 6685 -788 4 884 1615 270 53 13 chr13 39314693 39315091 -80969221 + MTD LTR MaLR 6 419 0 4 884 1329 312 43 62 chr13 39315096 39315707 -80968605 + Lx8 LINE L1 6687 7285 -188 4 884 434 323 25 0 chr13 39316600 39316758 -80967554 + RSINE1 SINE B4 4 165 0 4 884 312 70 0 0 chr13 39317269 39317312 -80967000 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 884 267 287 68 84 chr13 39318484 39318537 -80965775 - B2_Mm2 SINE B2 0 195 143 4 884 399 89 0 0 chr13 39318537 39318593 -80965719 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 884 444 284 74 8 chr13 39318593 39318729 -80965583 - B3A SINE B2 -46 152 9 4 884 246 310 69 0 chr13 39319172 39319317 -80964995 - L1MC5 LINE L1 -48 7913 7759 4 884 328 216 164 53 chr13 39319401 39319572 -80964740 - L1MC5 LINE L1 -297 7664 7475 4 884 299 326 10 0 chr13 39319965 39320063 -80964249 + Tigger5 DNA MER2_type 2301 2399 -7 4 884 366 313 68 0 chr13 39320250 39320397 -80963915 + MER97c DNA MER1_type? 173 329 -761 4 884 218 197 30 15 chr13 39320651 39320666 -80963646 + (TA)n Simple_repeat Simple_repeat 2 16 0 4 884 201 74 0 0 chr13 39320666 39320693 -80963619 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 884 218 197 30 15 chr13 39320693 39320744 -80963568 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 884 1078 82 0 0 chr13 39320744 39320879 -80963433 + B1_Mus2 SINE Alu 1 135 -12 4 884 342 0 0 0 chr13 39320879 39320917 -80963395 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 4 884 432 0 0 0 chr13 39320929 39320977 -80963335 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 885 180 0 0 0 chr13 39321695 39321715 -80962597 + (CAG)n Simple_repeat Simple_repeat 1 20 0 4 885 252 351 26 35 chr13 39322018 39322133 -80962179 - MIR3 SINE MIR -16 192 79 4 885 21 36 0 0 chr13 39322650 39322678 -80961634 + AT_rich Low_complexity Low_complexity 1 28 0 4 885 1031 341 80 13 chr13 39323008 39323644 -80960668 + Lx8 LINE L1 6719 7397 -76 4 885 201 355 54 18 chr13 39324289 39324401 -80959911 - MIR SINE MIR -130 132 17 4 885 230 261 97 24 chr13 39325723 39325806 -80958506 - MIRm SINE MIR -65 203 110 4 885 215 114 0 22 chr13 39325913 39325958 -80958354 + (TATAA)n Simple_repeat Simple_repeat 4 47 0 4 885 401 54 18 0 chr13 39326135 39326191 -80958121 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 885 1814 194 13 39 chr13 39326460 39326846 -80957466 - ORR1C1 LTR MaLR 0 378 3 4 885 3696 60 6 17 chr13 39327266 39327741 -80956571 + L1_Mus1 LINE L1 6097 6566 -1 4 885 234 314 17 110 chr13 39327932 39328050 -80956262 + MT2B LTR ERVL 130 236 -365 4 885 350 300 0 0 chr13 39327983 39328063 -80956249 + PB1D10 SINE Alu 12 91 -26 4 885 223 312 48 36 chr13 39328108 39328191 -80956121 + PB1D10 SINE Alu 33 116 -1 4 885 235 105 35 0 chr13 39328196 39328253 -80956059 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 4 885 267 316 159 41 chr13 39328706 39328901 -80955411 + ORR1E LTR MaLR 32 249 -110 4 885 860 309 59 30 chr13 39331690 39332163 -80952149 - Lx8 LINE L1 -194 7279 6793 4 885 2734 294 56 47 chr13 39332203 39334123 -80950189 - L1_Mur3 LINE L1 -464 5416 3480 4 885 642 231 40 59 chr13 39334140 39334160 -80950152 - B1_Mur3 SINE Alu 0 149 138 4 885 632 13 13 0 chr13 39334160 39334237 -80950075 + (TTCTC)n Simple_repeat Simple_repeat 4 81 0 4 885 642 231 40 59 chr13 39334237 39334368 -80949944 - B1_Mur3 SINE Alu -12 137 1 4 885 552 292 258 92 chr13 39334411 39334791 -80949521 - MT2A LTR ERVL -87 446 4 4 885 513 294 64 55 chr13 39334794 39335247 -80949065 - ERVL-B4-int LTR ERVL 0 5714 5258 4 885 1348 226 17 123 chr13 39335262 39335676 -80948636 + MTE2a LTR MaLR 10 379 0 4 885 201 74 0 0 chr13 39336733 39336760 -80947552 + (TTCA)n Simple_repeat Simple_repeat 2 28 0 4 885 1121 90 0 0 chr13 39338207 39338352 -80945960 + B1_Mus1 SINE Alu 3 147 -1 4 885 368 16 30 45 chr13 39338354 39338421 -80945891 + (CAAAA)n Simple_repeat Simple_repeat 2 67 0 4 885 182 289 0 0 chr13 39338599 39338644 -80945668 + MIRb SINE MIR 179 223 -45 4 885 1044 329 42 114 chr13 39339358 39340610 -80943702 + Lx8 LINE L1 6197 7360 -113 4 885 297 0 0 0 chr13 39340610 39340643 -80943669 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 885 369 0 0 0 chr13 39340643 39340683 -80943629 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 885 1044 329 42 114 chr13 39340683 39340776 -80943536 + Lx8 LINE L1 7361 7444 -29 4 885 360 0 0 0 chr13 39341977 39342017 -80942295 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 885 23 54 0 0 chr13 39342461 39342498 -80941814 + AT_rich Low_complexity Low_complexity 1 37 0 4 885 908 274 191 11 chr13 39343559 39343910 -80940402 - MTD LTR MaLR 0 419 6 4 885 1800 226 46 5 chr13 39344096 39344466 -80939846 + MTD LTR MaLR 21 405 -14 4 885 679 289 110 68 chr13 39344479 39344982 -80939330 + MTD-int LTR MaLR 1 637 -621 4 885 404 285 105 58 chr13 39344953 39345143 -80939169 + MTD-int LTR MaLR 777 975 -283 4 885 212 0 36 0 chr13 39346434 39346462 -80937850 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 885 2762 141 14 10 chr13 39347483 39347978 -80936334 + L1_Mur2 LINE L1 5090 5586 -291 4 885 756 298 108 8 chr13 39348020 39348270 -80936042 - B4A SINE B4 -16 276 2 4 885 21 82 0 0 chr13 39349680 39349729 -80934583 + AT_rich Low_complexity Low_complexity 1 49 0 4 885 442 80 13 26 chr13 39349751 39349828 -80934484 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 4 885 2182 191 109 4 chr13 39350240 39350709 -80933603 + RLTR11A2 LTR ERVK 1 518 -9 4 885 198 0 0 0 chr13 39351137 39351159 -80933153 + (GA)n Simple_repeat Simple_repeat 2 23 0 4 885 960 269 87 15 chr13 39351816 39352205 -80932107 - MTD LTR MaLR 0 419 3 4 885 221 348 146 0 chr13 39352235 39352324 -80931988 + PB1D7 SINE Alu 1 102 -18 4 885 740 288 91 25 chr13 39352966 39353364 -80930948 + L1MC2 LINE L1 3253 3674 -2472 4 885 432 0 0 0 chr13 39353364 39353412 -80930900 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 5 885 740 288 91 25 chr13 39353412 39353605 -80930707 + L1MC2 LINE L1 3675 3882 -2264 4 885 565 251 17 110 chr13 39353693 39354038 -80930274 + L1MC2 LINE L1 4040 4352 -1794 4 885 392 219 42 61 chr13 39354105 39354270 -80930042 + L1MC LINE L1 3571 3732 -2414 5 885 256 299 52 21 chr13 39354307 39354498 -80929814 + L1MC2 LINE L1 4828 5024 -1122 4 885 1671 264 63 12 chr13 39354842 39355443 -80928869 + L1MC2 LINE L1 5269 5900 -444 4 885 268 306 187 16 chr13 39355468 39355714 -80928598 + L1MC2 LINE L1 6043 6330 -3 4 885 4111 153 23 27 chr13 39355967 39356720 -80927592 - RMER6A LTR ERVK -4 752 3 5 885 23 0 0 0 chr13 39356775 39356798 -80927514 + AT_rich Low_complexity Low_complexity 1 23 0 5 885 255 325 12 64 chr13 39356802 39356973 -80927339 - RSINE1 SINE B4 0 165 4 5 885 22 0 0 0 chr13 39356991 39357013 -80927299 + AT_rich Low_complexity Low_complexity 1 22 0 5 885 225 0 0 0 chr13 39357309 39357334 -80926978 + (CAGA)n Simple_repeat Simple_repeat 3 27 0 5 885 411 21 0 0 chr13 39357449 39357497 -80926815 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 885 228 185 0 0 chr13 39363075 39363129 -80921183 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 885 495 0 0 0 chr13 39363129 39363184 -80921128 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 885 447 125 45 0 chr13 39365129 39365217 -80919095 + Lx2 LINE L1 6902 6993 -4 5 885 472 301 26 0 chr13 39366538 39366694 -80917618 - MER2 DNA MER2_type -57 288 129 5 885 587 251 23 120 chr13 39366745 39366962 -80917350 - B3A SINE B2 -2 196 1 5 885 2262 152 101 32 chr13 39367360 39367883 -80916429 + RLTR31_Mm LTR ERVK 3 561 0 5 885 264 242 0 0 chr13 39368248 39368310 -80916002 + T-rich Low_complexity Low_complexity 1 62 0 5 885 1168 86 6 6 chr13 39370521 39370697 -80913615 + (TCC)n Simple_repeat Simple_repeat 3 178 0 5 885 252 0 0 0 chr13 39370697 39370725 -80913587 + (TTC)n Simple_repeat Simple_repeat 2 29 0 5 885 270 333 14 0 chr13 39370734 39370806 -80913506 - ID SINE ID -150 74 2 5 885 313 200 107 48 chr13 39370888 39370972 -80913340 - PB1D10 SINE Alu -6 111 23 5 885 515 255 42 14 chr13 39372912 39373055 -80911257 - B1F SINE Alu 0 149 3 5 885 845 276 92 40 chr13 39373324 39373649 -80910663 + MT2A LTR ERVL 182 523 -10 5 885 800 304 29 12 chr13 39373995 39374238 -80910074 - Tigger5 DNA MER2_type 0 2406 2160 5 885 23 54 0 0 chr13 39374586 39374623 -80909689 + AT_rich Low_complexity Low_complexity 1 37 0 5 885 306 207 13 51 chr13 39374746 39374904 -80909408 + (TTA)n Simple_repeat Simple_repeat 1 152 0 5 885 306 0 0 0 chr13 39374996 39375030 -80909282 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 885 412 304 9 38 chr13 39375042 39375148 -80909164 - RSINE1 SINE B4 -19 146 44 5 885 698 67 9 0 chr13 39375276 39375381 -80908931 + (TG)n Simple_repeat Simple_repeat 1 106 0 5 885 339 330 31 86 chr13 39375470 39375692 -80908620 - B3A SINE B2 -5 211 2 5 885 438 20 0 0 chr13 39377797 39377848 -80906464 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 885 191 333 24 36 chr13 39377993 39378077 -80906235 + MIRb SINE MIR 133 215 -53 5 885 238 279 25 19 chr13 39378081 39378251 -80906061 + (ATGGTG)n Simple_repeat Simple_repeat 1 171 0 5 885 235 279 15 0 chr13 39378269 39378337 -80905975 - ORR1E LTR MaLR -20 339 271 5 885 296 362 73 41 chr13 39378391 39378636 -80905676 - ORR1E LTR MaLR -105 254 2 5 885 345 47 0 0 chr13 39379935 39379978 -80904334 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 885 283 274 48 0 chr13 39381387 39381471 -80902841 + MamRep564 Unknown Unknown 117 204 -153 5 885 1106 254 85 95 chr13 39381471 39381920 -80902392 - L1MC1 LINE L1 -12 6321 5868 5 885 1161 75 0 7 chr13 39381920 39382068 -80902244 + B1_Mus2 SINE Alu 1 147 0 5 885 1106 254 85 95 chr13 39382068 39382333 -80901979 - L1MC1 LINE L1 -466 5867 5614 5 885 567 0 0 0 chr13 39382334 39382397 -80901915 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 885 432 0 0 0 chr13 39382397 39382445 -80901867 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 885 575 211 50 78 chr13 39382955 39383135 -80901177 - B2_Mm2 SINE B2 -18 177 3 5 885 204 211 0 0 chr13 39383308 39383346 -80900966 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 885 563 222 90 0 chr13 39384067 39384211 -80900101 - RLTR16 LTR ERVK 0 505 349 5 885 900 257 17 30 chr13 39384203 39384436 -80899876 - RLTR20D LTR ERVK -288 280 51 5 885 1103 217 47 17 chr13 39385804 39386038 -80898274 - MTC LTR MaLR -75 346 106 5 885 625 263 58 14 chr13 39386041 39386249 -80898063 + Lx6 LINE L1 7244 7460 0 5 885 516 72 0 0 chr13 39386260 39386329 -80897983 + (GGAGA)n Simple_repeat Simple_repeat 5 73 0 5 885 618 197 8 0 chr13 39386329 39386446 -80897866 - MTC LTR MaLR -301 120 3 5 885 294 333 133 22 chr13 39386446 39386619 -80897693 + B4A SINE B4 94 286 -6 5 885 209 301 72 0 chr13 39386754 39386837 -80897475 - L2a LINE L2 -27 3399 3311 5 885 204 40 0 0 chr13 39387516 39387541 -80896771 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 5 885 408 40 0 0 chr13 39388202 39388252 -80896060 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 885 305 284 148 59 chr13 39389669 39389804 -80894508 - Tigger7 DNA MER2_type -37 2454 2308 5 885 432 0 0 0 chr13 39390137 39390185 -80894127 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 885 294 244 0 0 chr13 39390185 39390267 -80894045 + (TG)n Simple_repeat Simple_repeat 2 83 0 5 885 223 357 0 0 chr13 39391152 39391236 -80893076 + MIRb SINE MIR 179 262 -6 5 885 328 278 43 0 chr13 39392735 39392850 -80891462 - MER121 Unknown Unknown -161 251 132 5 885 6187 30 4 0 chr13 39393116 39393956 -80890356 + L1Md_F2 LINE L1 5458 6300 -282 5 885 458 62 0 0 chr13 39393956 39394020 -80890292 + L1Md_F2 LINE L1 6516 6579 -3 5 885 226 192 57 19 chr13 39394079 39394132 -80890180 - MTC LTR MaLR -12 409 355 5 885 383 240 48 40 chr13 39394131 39394257 -80890055 - MTC LTR MaLR -275 146 20 5 885 741 23 0 0 chr13 39394343 39394430 -80889882 + (TG)n Simple_repeat Simple_repeat 2 88 0 5 885 525 311 18 47 chr13 39394521 39394539 -80889773 - RSINE1 SINE B4 0 165 148 5 885 198 0 0 0 chr13 39394539 39394561 -80889751 + (TTG)n Simple_repeat Simple_repeat 2 23 0 5 885 525 311 18 47 chr13 39394561 39394711 -80889601 - RSINE1 SINE B4 -18 147 2 5 885 719 333 37 5 chr13 39394717 39394934 -80889378 - B4A SINE B4 -68 224 1 5 885 242 0 0 57 chr13 39395232 39395267 -80889045 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 885 840 104 0 0 chr13 39395447 39395572 -80888740 + (TC)n Simple_repeat Simple_repeat 2 126 0 5 885 4765 83 16 0 chr13 39395732 39396343 -80887969 + L1_Mus3 LINE L1 6010 6630 -8 5 885 1250 75 0 0 chr13 39396350 39396497 -80887815 + B1_Mm SINE Alu 1 147 0 5 885 28 0 0 0 chr13 39396499 39396527 -80887785 + AT_rich Low_complexity Low_complexity 1 28 0 5 885 282 29 0 0 chr13 39396527 39396562 -80887750 + (CATA)n Simple_repeat Simple_repeat 2 36 0 5 885 864 166 0 0 chr13 39396830 39396993 -80887319 + GA-rich Low_complexity Low_complexity 4 166 0 5 885 687 256 55 41 chr13 39397094 39397314 -80886998 - RMER15 LTR ERVL -293 282 60 5 885 309 237 0 0 chr13 39397388 39397447 -80886865 - RMER15 LTR ERVL -515 60 2 5 885 377 95 0 16 chr13 39400041 39400105 -80884207 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 885 570 251 86 35 chr13 39400184 39400382 -80883930 - B3 SINE B2 -1 215 8 5 885 579 29 0 0 chr13 39402195 39402264 -80882048 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 885 697 149 0 40 chr13 39402546 39402672 -80881640 - URR1B DNA MER1_type -1 224 104 5 885 999 25 0 0 chr13 39402715 39402833 -80881479 + (TTCCC)n Simple_repeat Simple_repeat 4 121 0 5 885 330 311 0 47 chr13 39402846 39402974 -80881338 + CT-rich Low_complexity Low_complexity 3 124 0 5 885 472 268 49 35 chr13 39403241 39403384 -80880928 - MER5A DNA MER1_type 0 189 45 5 885 450 257 70 86 chr13 39403416 39403603 -80880709 + MLT1B LTR MaLR 92 275 -115 5 885 603 40 0 0 chr13 39404206 39404280 -80880032 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 885 244 348 62 0 chr13 39404776 39404937 -80879375 + L1MC1 LINE L1 6020 6190 -143 5 885 181 279 120 51 chr13 39405152 39405269 -80879043 + L2a LINE L2 3046 3170 -256 5 885 2657 86 3 0 chr13 39405764 39406088 -80878224 + ORR1A2 LTR MaLR 1 325 -2 5 885 474 218 24 24 chr13 39406779 39406906 -80877406 + RMER30 DNA MER1_type 7 133 -69 5 885 365 193 97 35 chr13 39406808 39406921 -80877391 - Charlie12 DNA MER1_type -2700 173 54 5 885 227 377 44 33 chr13 39407331 39407512 -80876800 - ORR1E LTR MaLR -159 200 18 5 885 590 269 234 71 chr13 39407663 39407915 -80876397 + MTD LTR MaLR 1 293 -107 5 885 769 325 34 11 chr13 39408670 39409028 -80875284 - L1_Mur3 LINE L1 -1078 4802 4437 5 885 1073 97 6 0 chr13 39409389 39409554 -80874758 + (GAAA)n Simple_repeat Simple_repeat 2 167 0 5 885 728 332 111 23 chr13 39409665 39410223 -80874089 + Lx7 LINE L1 6707 7313 -383 5 885 230 383 25 16 chr13 39410642 39410764 -80873548 + MLT1A1 LTR MaLR 37 159 -396 5 885 319 267 11 11 chr13 39411081 39411172 -80873140 + MLT1A1 LTR MaLR 305 395 -13 5 885 243 235 20 0 chr13 39411339 39411390 -80872922 + MLT1H1 LTR MaLR 327 378 -177 5 885 315 0 0 0 chr13 39411613 39411648 -80872664 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 885 1187 81 40 0 chr13 39411690 39411863 -80872449 - L1_Mus3 LINE L1 -3 6635 6456 5 885 2468 86 38 0 chr13 39412244 39412559 -80871753 + ORR1A2 LTR MaLR 1 327 0 5 885 451 250 30 60 chr13 39413827 39413993 -80870319 - MER2 DNA MER2_type -94 251 91 5 885 240 86 0 0 chr13 39414486 39414521 -80869791 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 5 885 21 36 0 0 chr13 39415567 39415595 -80868717 + AT_rich Low_complexity Low_complexity 1 28 0 5 885 486 0 0 0 chr13 39415752 39415806 -80868506 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 885 180 0 0 0 chr13 39416071 39416091 -80868221 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 885 270 0 0 0 chr13 39416091 39416120 -80868192 + (CG)n Simple_repeat Simple_repeat 1 30 0 5 885 441 54 0 0 chr13 39416120 39416175 -80868137 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 885 720 48 10 0 chr13 39417001 39417104 -80867208 + L1Md_F2 LINE L1 6479 6582 0 5 885 224 249 132 12 chr13 39417193 39417277 -80867035 + PB1D10 SINE Alu 13 105 -12 6 885 356 343 63 14 chr13 39417567 39417854 -80866458 - Charlie4a DNA MER1_type -192 316 16 6 885 210 143 0 0 chr13 39418930 39418965 -80865347 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 885 27 29 0 0 chr13 39419045 39419079 -80865233 + AT_rich Low_complexity Low_complexity 1 34 0 6 885 735 12 0 0 chr13 39419213 39419297 -80865015 + (CA)n Simple_repeat Simple_repeat 2 85 0 6 885 474 256 57 57 chr13 39419421 39419545 -80864767 + ID_B1 SINE B4 81 204 -20 6 885 413 304 91 56 chr13 39419422 39419565 -80864747 + B1_Mur3 SINE Alu 1 148 -1 6 885 439 312 16 8 chr13 39419688 39419817 -80864495 + B1F1 SINE Alu 1 130 -19 6 885 258 32 0 0 chr13 39419834 39419865 -80864447 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 6 885 509 249 18 6 chr13 39420351 39420486 -80863826 + B1F SINE Alu 16 148 -1 6 885 407 254 27 0 chr13 39420516 39420626 -80863686 - L1MA6 LINE L1 -94 6206 6094 6 885 1176 257 78 67 chr13 39420654 39421025 -80863287 - MTE2b LTR MaLR -4 375 1 6 885 5523 70 1 3 chr13 39422823 39423494 -80860818 - L1Md_F2 LINE L1 -2 6580 5911 6 885 4433 69 2 0 chr13 39423494 39424078 -80860234 + L1Md_F2 LINE L1 5340 5931 -651 6 885 597 14 0 0 chr13 39424455 39424525 -80859787 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 885 360 0 0 0 chr13 39424525 39424564 -80859748 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 885 217 196 0 38 chr13 39424576 39424629 -80859683 + (CAGAGA)n Simple_repeat Simple_repeat 2 52 0 6 885 193 325 141 8 chr13 39424818 39424939 -80859373 + MIRb SINE MIR 22 158 -110 6 885 183 271 109 95 chr13 39425024 39425171 -80859141 - MIRb SINE MIR -68 200 52 6 885 501 17 0 0 chr13 39425622 39425680 -80858632 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 885 407 68 17 0 chr13 39427106 39427165 -80857147 + (TG)n Simple_repeat Simple_repeat 1 60 0 6 885 212 191 21 0 chr13 39427249 39427296 -80857016 + (TCTG)n Simple_repeat Simple_repeat 1 48 0 6 885 527 0 16 0 chr13 39427297 39427360 -80856952 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 6 885 225 300 100 0 chr13 39427367 39427467 -80856845 - PB1D10 SINE Alu -7 110 1 6 885 735 244 6 24 chr13 39427467 39427556 -80856756 - B4A SINE B4 -206 86 1 6 885 671 0 13 0 chr13 39427618 39427697 -80856615 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 6 885 213 250 31 0 chr13 39427697 39427761 -80856551 + (TGGA)n Simple_repeat Simple_repeat 3 68 0 6 885 243 346 0 0 chr13 39429250 39429328 -80854984 - ID_B1 SINE B4 -56 168 91 6 885 664 287 71 58 chr13 39429641 39429952 -80854360 - MTE2a LTR MaLR 0 379 65 6 885 772 133 58 22 chr13 39429979 39430117 -80854195 + URR1B DNA MER1_type 40 182 -43 6 885 1149 220 5 9 chr13 39430338 39430549 -80853763 + B3 SINE B2 1 210 -6 6 885 296 198 22 65 chr13 39433149 39433241 -80851071 + MLT1A1 LTR MaLR 321 408 0 6 885 616 302 55 9 chr13 39433308 39433525 -80850787 - ORR1E LTR MaLR -127 232 6 6 885 1278 85 0 0 chr13 39433815 39433992 -80850320 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 6 885 366 275 60 15 chr13 39434159 39434292 -80850020 + MER2 DNA MER2_type 91 229 -116 6 885 1426 77 5 15 chr13 39435373 39435571 -80848741 + L1_Mus2 LINE L1 6370 6565 -1 6 885 380 303 132 25 chr13 39436239 39436398 -80847914 - ORR1E LTR MaLR -169 190 15 6 885 228 279 30 69 chr13 39436752 39436883 -80847429 + Zaphod DNA Tip100 2588 2713 -1318 6 885 263 296 92 73 chr13 39437711 39437875 -80846437 - ORR1E LTR MaLR -3 376 210 6 885 324 264 21 84 chr13 39437870 39437965 -80846347 - ORR1E LTR MaLR -263 96 8 6 885 510 67 0 0 chr13 39437975 39438050 -80846262 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 885 367 267 0 33 chr13 39438075 39438195 -80846117 - L1MA5 LINE L1 -76 6224 6109 6 885 229 264 0 0 chr13 39438271 39438324 -80845988 + L2b LINE L2 3323 3375 0 6 885 436 314 93 122 chr13 39438407 39438817 -80845495 - RMER10A LTR ERVL -27 415 18 6 885 628 250 20 45 chr13 39438936 39439091 -80845221 + ID_B1 SINE B4 78 225 -67 6 885 579 286 80 40 chr13 39439154 39439301 -80845011 + B3A SINE B2 1 159 -39 6 885 264 59 0 0 chr13 39439301 39439335 -80844977 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 885 579 286 80 40 chr13 39439335 39439362 -80844950 + B3A SINE B2 160 182 -16 6 885 228 181 192 42 chr13 39439362 39439529 -80844783 + Lx9 LINE L1 7424 7615 -29 6 885 1810 174 37 3 chr13 39440573 39440872 -80843440 + RLTR27 LTR ERVK 1 309 0 6 885 184 250 10 10 chr13 39440941 39441038 -80843274 + (TG)n Simple_repeat Simple_repeat 1 97 0 6 885 640 305 31 110 chr13 39441038 39441355 -80842957 - B4A SINE B4 0 292 1 6 885 324 0 0 0 chr13 39441937 39441973 -80842339 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 885 385 306 144 0 chr13 39442068 39442228 -80842084 + MER2 DNA MER2_type 99 281 -64 6 885 450 0 0 0 chr13 39442278 39442328 -80841984 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 885 203 216 19 56 chr13 39443244 39443298 -80841014 + polypyrimidine Low_complexity Low_complexity 2 53 0 6 885 284 177 0 20 chr13 39443302 39443400 -80840912 + (TCTG)n Simple_repeat Simple_repeat 2 97 0 6 885 320 148 16 0 chr13 39444039 39444100 -80840212 + CT-rich Low_complexity Low_complexity 4 65 0 6 885 1511 239 49 47 chr13 39444271 39444807 -80839505 + MTD LTR MaLR 26 398 -21 6 885 198 312 0 15 chr13 39444953 39445018 -80839294 + MIRc SINE MIR 83 146 -122 6 885 261 143 0 0 chr13 39445086 39445128 -80839184 - RLTR14 LTR ERV1 0 382 341 6 885 216 0 0 0 chr13 39445181 39445205 -80839107 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 6 885 486 0 0 0 chr13 39447364 39447418 -80836894 + (A)n Simple_repeat Simple_repeat 1 54 0 6 885 1222 309 75 25 chr13 39447999 39448520 -80835792 + Lx5 LINE L1 6485 7031 -19 6 885 333 212 0 0 chr13 39448538 39448559 -80835753 + polypurine Low_complexity Low_complexity 4 24 0 6 885 1002 171 0 0 chr13 39448559 39448800 -80835512 + GA-rich Low_complexity Low_complexity 1 241 0 6 885 1104 132 0 0 chr13 39448802 39449165 -80835147 + (GGAA)n Simple_repeat Simple_repeat 1 363 0 6 885 309 327 130 17 chr13 39449186 39449301 -80835011 + RSINE1 SINE B4 26 153 -12 6 885 234 91 0 0 chr13 39449414 39449447 -80834865 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 885 207 0 0 0 chr13 39449619 39449642 -80834670 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 885 339 24 0 23 chr13 39449682 39449725 -80834587 - HAL1-3A_ME LINE L1 -841 2017 1976 6 885 229 65 0 0 chr13 39449730 39449761 -80834551 - B1_Mm SINE Alu -8 139 109 6 885 351 0 0 0 chr13 39449776 39449815 -80834497 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 885 1091 57 0 67 chr13 39449815 39449965 -80834347 - B1_Mus1 SINE Alu -8 140 1 6 885 936 150 40 28 chr13 39450003 39450197 -80834115 + B2_Mm2 SINE B2 2 208 -8 6 885 423 294 29 10 chr13 39450248 39450351 -80833961 + PB1D7 SINE Alu 8 112 -8 6 885 344 295 0 0 chr13 39450360 39450438 -80833874 + ID4 SINE ID 5 82 -1 6 885 182 214 0 23 chr13 39450518 39450561 -80833751 + L4 LINE RTE 1232 1273 -756 6 886 269 188 29 0 chr13 39452772 39452841 -80831471 + CT-rich Low_complexity Low_complexity 2 72 0 6 886 288 0 0 0 chr13 39452846 39452878 -80831434 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 886 486 49 0 0 chr13 39453094 39453155 -80831157 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 886 654 249 5 66 chr13 39454009 39454220 -80830092 + B3A SINE B2 1 198 0 6 886 201 143 0 0 chr13 39454334 39454369 -80829943 + (C)n Simple_repeat Simple_repeat 1 35 0 6 886 369 0 0 0 chr13 39455253 39455294 -80829018 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 886 798 289 0 40 chr13 39455625 39455827 -80828485 - B3A SINE B2 -4 194 1 6 886 611 291 109 19 chr13 39456298 39456564 -80827748 + B4A SINE B4 3 292 0 6 886 242 208 0 94 chr13 39456611 39456728 -80827584 + RLTR40 LTR ERVK 572 677 -140 6 886 399 239 0 0 chr13 39456729 39456982 -80827330 + (CA)n Simple_repeat Simple_repeat 1 253 0 6 886 198 217 0 0 chr13 39456997 39457066 -80827246 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 886 794 172 0 11 chr13 39457078 39457260 -80827052 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 886 206 128 26 0 chr13 39458068 39458107 -80826205 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 886 1125 86 20 61 chr13 39458148 39458303 -80826009 + B2_Mm1t SINE B2 2 159 -34 6 886 333 0 0 0 chr13 39458303 39458340 -80825972 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 6 886 1125 86 20 61 chr13 39458340 39458382 -80825930 + B2_Mm1t SINE B2 160 191 -2 6 886 1389 61 0 0 chr13 39459113 39459293 -80825019 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 6 886 767 40 10 0 chr13 39459293 39459392 -80824920 + (TCC)n Simple_repeat Simple_repeat 3 102 0 6 886 233 202 25 12 chr13 39460389 39460469 -80823843 + L1MA5 LINE L1 6210 6290 -10 6 886 288 232 0 89 chr13 39461498 39461588 -80822724 + ID4 SINE ID 1 82 -1 6 886 300 224 26 26 chr13 39461591 39461669 -80822643 + L1MEg LINE L1 606 683 -5401 6 886 267 54 0 0 chr13 39463071 39463108 -80821204 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 6 886 189 0 0 0 chr13 39463502 39463523 -80820789 + (A)n Simple_repeat Simple_repeat 1 21 0 6 886 22 35 0 0 chr13 39465043 39465072 -80819240 + AT_rich Low_complexity Low_complexity 1 29 0 6 886 674 250 22 0 chr13 39465366 39465502 -80818810 + ID_B1 SINE B4 84 222 -2 6 886 230 274 0 27 chr13 39465514 39465589 -80818723 + A-rich Low_complexity Low_complexity 2 74 0 6 886 1661 212 41 11 chr13 39465701 39466064 -80818248 - ORR1D1 LTR MaLR 0 374 1 6 886 2955 75 36 0 chr13 39466877 39467263 -80817049 - MTB LTR MaLR 0 400 1 6 886 504 206 90 22 chr13 39467369 39467503 -80816809 - MTD LTR MaLR 0 419 277 7 886 719 220 7 26 chr13 39467509 39467663 -80816649 - MTD LTR MaLR -259 160 10 7 886 237 132 0 0 chr13 39469715 39469753 -80814559 + (GAAAA)n Simple_repeat Simple_repeat 2 39 0 7 886 293 268 34 126 chr13 39469954 39470093 -80814219 - L1MDb LINE L1 -3543 2994 2867 7 886 3432 24 56 0 chr13 39470093 39470504 -80813808 - L1Md_F3 LINE L1 -16 6568 6135 7 886 293 268 34 126 chr13 39470504 39470633 -80813679 - L1MDb LINE L1 -3671 2866 2751 7 886 279 302 39 24 chr13 39470683 39470890 -80813422 - L1MDb LINE L1 -3825 2712 2503 7 886 244 325 40 95 chr13 39471521 39471647 -80812665 - B1F SINE Alu -13 136 18 7 886 309 354 20 34 chr13 39471672 39471821 -80812491 - L1MDb LINE L1 -4946 1687 1541 7 886 4098 69 12 32 chr13 39471847 39472415 -80811897 - L1Md_F2 LINE L1 -12 6570 6014 7 886 349 273 95 28 chr13 39472608 39472819 -80811493 - L1MDb LINE L1 -5216 1324 1100 7 886 3022 83 0 8 chr13 39472868 39473267 -80811045 - MTA_Mm LTR MaLR 0 396 1 7 886 560 228 170 0 chr13 39475001 39475225 -80809087 + Lx9 LINE L1 7380 7641 -3 7 886 503 335 70 61 chr13 39475469 39475834 -80808478 + MTE2a LTR MaLR 35 377 -42 7 886 1050 271 23 27 chr13 39475850 39476149 -80808163 - MTEb LTR MaLR -81 298 1 7 886 378 42 0 0 chr13 39476792 39476840 -80807472 + (ATG)n Simple_repeat Simple_repeat 2 49 0 7 886 383 364 40 23 chr13 39476988 39477165 -80807147 - MER2 DNA MER2_type -5 340 161 7 886 350 229 0 67 chr13 39477756 39477831 -80806481 + ID4 SINE ID 10 79 -4 7 886 238 360 90 36 chr13 39478755 39478922 -80805390 + ORR1E LTR MaLR 22 197 -162 7 886 508 324 11 0 chr13 39479167 39479346 -80804966 - Lx8 LINE L1 -1065 6408 6228 7 886 331 289 0 19 chr13 39480024 39480130 -80804182 + CT-rich Low_complexity Low_complexity 1 104 0 7 886 345 220 17 29 chr13 39480267 39480440 -80803872 + (TATATG)n Simple_repeat Simple_repeat 6 176 0 7 886 1885 186 24 60 chr13 39481665 39482122 -80802190 - RMER19B LTR ERVK 0 902 308 7 886 1319 88 5 35 chr13 39483153 39483352 -80800960 + B2_Mm2 SINE B2 1 193 -2 7 886 894 147 0 0 chr13 39483930 39484087 -80800225 + (TTCC)n Simple_repeat Simple_repeat 4 160 0 7 886 413 36 18 0 chr13 39484508 39484563 -80799749 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 7 886 356 323 26 26 chr13 39485457 39485683 -80798629 - Lx9 LINE L1 -215 7429 7204 7 886 510 189 0 0 chr13 39485777 39485957 -80798355 + CT-rich Low_complexity Low_complexity 1 180 0 7 886 261 208 0 0 chr13 39485971 39486048 -80798264 + CT-rich Low_complexity Low_complexity 2 78 0 7 886 639 234 15 4 chr13 39486063 39486195 -80798117 - B1_Mur2 SINE Alu -20 128 1 7 886 590 213 25 0 chr13 39486200 39486322 -80797990 + B1_Mur1 SINE Alu 24 148 -1 7 886 207 0 0 0 chr13 39486327 39486350 -80797962 + (A)n Simple_repeat Simple_repeat 1 23 0 7 886 342 223 72 41 chr13 39486381 39486544 -80797768 + B3 SINE B2 51 216 0 7 886 330 331 20 54 chr13 39486573 39486720 -80797592 + B2_Mm1a SINE B2 5 146 -47 7 886 28 0 0 0 chr13 39487071 39487099 -80797213 + AT_rich Low_complexity Low_complexity 1 28 0 7 886 1258 115 4 81 chr13 39487118 39487364 -80796948 - L1_Mus3 LINE L1 -1 6637 6411 7 886 2646 71 3 3 chr13 39487736 39488089 -80796223 + MTA_Mm LTR MaLR 1 353 -43 7 886 1323 83 0 0 chr13 39488091 39488454 -80795858 + (TTC)n Simple_repeat Simple_repeat 1 363 0 7 886 531 144 0 0 chr13 39488454 39488579 -80795733 + (CTG)n Simple_repeat Simple_repeat 1 125 0 7 886 1137 75 0 0 chr13 39488579 39488753 -80795559 + (TTC)n Simple_repeat Simple_repeat 2 175 0 7 886 1084 99 0 0 chr13 39488760 39488901 -80795411 - B1_Mus2 SINE Alu -6 141 1 7 886 465 35 0 0 chr13 39488901 39488958 -80795354 + MTA_Mm LTR MaLR 344 400 0 7 886 4151 97 18 18 chr13 39489337 39489989 -80794323 - Lx3B LINE L1 -386 6587 5936 7 886 483 18 0 0 chr13 39491568 39491624 -80792688 + (TTG)n Simple_repeat Simple_repeat 2 57 0 7 886 284 305 48 48 chr13 39491732 39491856 -80792456 + B1F SINE Alu 13 136 -13 7 886 295 191 60 0 chr13 39491862 39491946 -80792366 + (CCTAG)n Simple_repeat Simple_repeat 2 90 0 7 886 238 222 22 28 chr13 39491947 39492018 -80792294 + PB1 SINE Alu 77 146 -3 7 886 525 237 8 92 chr13 39492565 39492695 -80791617 - RSINE1 SINE B4 0 165 47 7 886 224 329 66 0 chr13 39492655 39492731 -80791581 - B3 SINE B2 -131 85 5 7 886 324 0 0 0 chr13 39492791 39492827 -80791485 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 886 1008 302 35 18 chr13 39492846 39493132 -80791180 - B4A SINE B4 -1 291 1 7 886 311 316 83 10 chr13 39493158 39493254 -80791058 - PB1D10 SINE Alu -5 115 13 7 886 632 300 24 14 chr13 39493346 39493559 -80790753 + B3 SINE B2 1 215 -1 7 886 268 378 50 50 chr13 39493668 39493695 -80790617 + B4 SINE B4 66 219 -68 7 886 384 312 118 16 chr13 39493695 39493822 -80790490 + B1F SINE Alu 3 142 -7 7 886 280 319 100 19 chr13 39494004 39494164 -80790148 + L3b LINE CR1 42 214 -268 7 886 522 83 0 0 chr13 39494532 39494604 -80789708 + (TA)n Simple_repeat Simple_repeat 2 73 0 7 886 323 354 112 20 chr13 39494608 39494902 -80789410 - L1ME4a LINE L1 -226 5898 5578 7 886 434 151 19 19 chr13 39496458 39496566 -80787746 + (TA)n Simple_repeat Simple_repeat 2 109 0 7 886 870 234 20 50 chr13 39497080 39497282 -80787030 + B3A SINE B2 2 197 -1 7 886 2793 116 29 6 chr13 39497457 39497924 -80786388 - RLTR25A LTR ERVK -542 561 1 7 886 201 74 0 0 chr13 39499570 39499597 -80784715 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 886 462 274 19 10 chr13 39499600 39499703 -80784609 - RSINE1 SINE B4 -59 106 3 7 886 1095 79 153 29 chr13 39500321 39500491 -80783821 - B2_Mm2 SINE B2 -2 193 3 1 886 1071 107 6 11 chr13 39501359 39501539 -80782773 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2 886 306 331 122 43 chr13 39505305 39505545 -80778767 + MER34A LTR ERV1 1 261 -310 3 886 778 217 174 0 chr13 39505545 39505729 -80778583 + B3 SINE B2 1 216 0 4 886 306 331 122 43 chr13 39505729 39505766 -80778546 + MER34A LTR ERV1 262 300 -271 3 886 330 26 0 0 chr13 39505775 39505814 -80778498 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 886 366 280 40 51 chr13 39506554 39506731 -80777581 - MamRep434 DNA TcMar -83 343 169 6 886 510 233 34 9 chr13 39507141 39507301 -80777011 - MTE2b LTR MaLR -3 376 145 7 886 228 98 0 73 chr13 39507331 39507386 -80776926 + T-rich Low_complexity Low_complexity 2 52 0 8 886 842 180 162 15 chr13 39507535 39507732 -80776580 - URR1A DNA MER1_type 0 226 1 9 886 379 316 162 48 chr13 39507912 39508852 -80775460 + L1M5 LINE L1 2464 3510 -2636 1 886 524 258 47 0 chr13 39509288 39509416 -80774896 + B4A SINE B4 136 269 -23 1 886 213 39 0 0 chr13 39509852 39509878 -80774434 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 886 184 0 0 88 chr13 39509950 39509984 -80774328 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 886 258 250 60 0 chr13 39510680 39510773 -80773539 + L1MA6 LINE L1 6152 6247 -53 1 886 333 224 176 39 chr13 39510933 39511035 -80773277 + PB1D10 SINE Alu 1 116 -1 1 886 679 259 60 61 chr13 39511577 39511870 -80772442 + RLTR12B LTR ERVK 42 314 -254 1 886 3133 94 2 31 chr13 39512141 39512560 -80771752 - MTB_Mm LTR MaLR 0 407 1 1 886 432 0 0 0 chr13 39512875 39512923 -80771389 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 886 3283 154 61 37 chr13 39513620 39514090 -80770222 + RMER17C-int LTR ERVK 2413 2873 -365 1 886 237 83 0 0 chr13 39514090 39514126 -80770186 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 886 3283 154 61 37 chr13 39514126 39514297 -80770015 + RMER17C-int LTR ERVK 2874 3069 -169 1 886 357 228 332 0 chr13 39514313 39514559 -80769753 - L1MC2 LINE L1 -193 6140 5814 2 886 363 228 0 0 chr13 39514561 39514653 -80769659 + CT-rich Low_complexity Low_complexity 5 96 0 2 886 277 128 0 0 chr13 39515745 39515784 -80768528 - PB1 SINE Alu -29 98 60 2 886 4512 46 29 0 chr13 39517213 39517736 -80766576 + L1Md_F2 LINE L1 6045 6582 0 2 886 794 223 122 0 chr13 39517941 39518129 -80766183 - B3 SINE B2 -5 211 1 2 886 1260 41 0 7 chr13 39518577 39518724 -80765588 - B1_Mm SINE Alu 0 147 2 2 886 206 172 33 33 chr13 39518897 39518957 -80765355 + T-rich Low_complexity Low_complexity 1 60 0 2 886 357 136 0 0 chr13 39519437 39519503 -80764809 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 886 261 252 33 75 chr13 39519750 39519870 -80764442 - L1MCb LINE L1 -4921 1502 1388 2 886 334 338 119 35 chr13 39520093 39520528 -80763784 - L1MCb LINE L1 -5446 976 505 2 886 360 0 0 0 chr13 39520539 39520579 -80763733 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 886 261 0 0 0 chr13 39522170 39522199 -80762113 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 886 235 241 144 31 chr13 39522390 39522486 -80761826 - ID4_ SINE ID -42 110 5 3 886 366 23 0 0 chr13 39522774 39522817 -80761495 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 886 229 186 23 0 chr13 39522827 39522870 -80761442 - tRNA-Ala-GCA tRNA tRNA -31 44 1 3 886 346 285 68 62 chr13 39524190 39524336 -80759976 - RSINE1 SINE B4 0 165 19 3 886 843 84 17 0 chr13 39524458 39524577 -80759735 + Lx2 LINE L1 6523 6643 -354 3 886 1223 117 87 14 chr13 39524577 39524785 -80759527 + Lx2 LINE L1 6775 6997 0 3 886 234 0 0 0 chr13 39524813 39524839 -80759473 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 3 886 929 121 23 0 chr13 39524839 39525013 -80759299 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 3 886 4527 82 3 2 chr13 39526482 39527053 -80757259 + Lx3_Mus LINE L1 6438 7009 0 3 886 614 207 0 6 chr13 39527128 39527303 -80757009 + (TA)n Simple_repeat Simple_repeat 2 175 0 4 886 324 70 0 0 chr13 39527366 39527409 -80756903 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 4 886 798 85 0 0 chr13 39527410 39527516 -80756796 - B1_Mm SINE Alu 0 147 42 4 886 304 239 85 21 chr13 39527453 39527547 -80756765 - RLTR25B LTR ERVK -519 509 410 4 886 1528 225 107 13 chr13 39527742 39528125 -80756187 - MTD LTR MaLR 0 419 1 4 886 231 211 19 0 chr13 39528218 39528270 -80756042 - L1M2 LINE L1 -416 5884 5832 4 886 186 43 0 0 chr13 39528275 39528298 -80756014 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 4 886 182 150 0 24 chr13 39528309 39528350 -80755962 + CT-rich Low_complexity Low_complexity 2 41 0 4 886 280 148 31 14 chr13 39528350 39528433 -80755879 - L1M2 LINE L1 -473 5827 5743 4 886 328 295 86 91 chr13 39528433 39528784 -80755528 - L1MEf LINE L1 -4735 2302 1954 4 886 342 341 14 98 chr13 39529056 39529199 -80755113 - B1F SINE Alu -18 131 1 4 886 300 295 0 19 chr13 39530162 39530221 -80754091 + polypurine Low_complexity Low_complexity 3 61 0 5 886 1207 68 0 40 chr13 39530221 39530373 -80753939 + B1_Mm SINE Alu 1 146 -1 5 886 300 295 0 19 chr13 39530373 39530420 -80753892 + polypurine Low_complexity Low_complexity 62 107 0 5 886 1097 118 6 0 chr13 39530429 39530607 -80753705 + (GAA)n Simple_repeat Simple_repeat 1 179 0 5 886 297 0 0 0 chr13 39530607 39530640 -80753672 + (GGA)n Simple_repeat Simple_repeat 1 33 0 5 886 1006 121 6 11 chr13 39530641 39530817 -80753495 + (GAA)n Simple_repeat Simple_repeat 2 176 0 5 886 228 331 65 0 chr13 39530875 39530999 -80753313 - L1MEf LINE L1 -5957 466 335 4 886 655 107 10 10 chr13 39531710 39531814 -80752498 - URR1B DNA MER1_type 0 225 122 5 886 1367 209 115 43 chr13 39531875 39532259 -80752053 + MTD LTR MaLR 2 405 -14 5 886 214 357 0 0 chr13 39533553 39533623 -80750689 + CT-rich Low_complexity Low_complexity 5 74 0 5 886 240 276 132 0 chr13 39533659 39533754 -80750558 - PB1D10 SINE Alu -1 116 10 5 886 608 287 89 22 chr13 39533831 39534102 -80750210 - B4A SINE B4 -3 289 1 6 886 590 327 98 19 chr13 39534456 39534721 -80749591 + B4A SINE B4 1 286 -6 6 886 633 231 0 17 chr13 39534805 39534924 -80749388 - PB1D9 SINE Alu -2 118 2 6 886 528 127 0 0 chr13 39535124 39535234 -80749078 + (TC)n Simple_repeat Simple_repeat 2 111 0 6 886 323 154 0 15 chr13 39535241 39535307 -80749005 + (TA)n Simple_repeat Simple_repeat 2 66 0 6 886 904 310 45 36 chr13 39536347 39536655 -80747657 + MLT2B2 LTR ERVL 1 311 -204 6 886 373 277 85 0 chr13 39537190 39537284 -80747028 - PB1D10 SINE Alu -9 108 7 6 886 227 0 0 83 chr13 39537300 39537336 -80746976 + (A)n Simple_repeat Simple_repeat 1 33 0 6 886 350 267 87 22 chr13 39537439 39537531 -80746781 + PB1D10 SINE Alu 3 100 -17 6 886 252 0 0 0 chr13 39537533 39537561 -80746751 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 886 275 381 15 53 chr13 39539366 39539499 -80744813 - MER20 DNA MER1_type -5 214 87 7 886 523 287 14 34 chr13 39539685 39539833 -80744479 - B1F SINE Alu -3 146 2 7 886 1191 68 0 0 chr13 39540326 39540474 -80743838 + B2_Mm2 SINE B2 2 149 -46 7 886 315 0 0 0 chr13 39540479 39540514 -80743798 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 7 886 653 175 7 0 chr13 39540875 39541012 -80743300 + (TCCA)n Simple_repeat Simple_repeat 3 140 0 7 886 192 77 0 0 chr13 39541346 39541372 -80742940 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 886 880 249 43 10 chr13 39541796 39542003 -80742309 - B3 SINE B2 0 216 3 7 886 481 271 95 50 chr13 39543061 39543240 -80741072 + B3A SINE B2 12 198 0 7 886 240 312 61 20 chr13 39543892 39543990 -80740322 + PB1D10 SINE Alu 9 110 -7 7 886 326 263 72 21 chr13 39544187 39544284 -80740028 - PB1D10 SINE Alu -15 102 1 7 886 191 146 171 0 chr13 39544355 39544396 -80739916 - L2 LINE L2 -585 2834 2787 8 886 389 346 23 0 chr13 39544501 39544634 -80739678 + RSINE1 SINE B4 1 136 -29 8 886 207 0 0 0 chr13 39544651 39544674 -80739638 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 886 1742 116 12 4 chr13 39545129 39545388 -80738924 + Lx2 LINE L1 6737 6997 0 8 886 183 80 0 0 chr13 39545651 39545676 -80738636 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 886 297 0 0 0 chr13 39545815 39545848 -80738464 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 886 200 312 0 0 chr13 39545848 39545896 -80738416 + (CG)n Simple_repeat Simple_repeat 1 48 0 8 886 297 0 0 0 chr13 39546156 39546189 -80738123 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 8 886 479 290 128 62 chr13 39546315 39546620 -80737692 - MER2B DNA MER2_type -10 326 2 8 886 243 0 0 0 chr13 39547990 39548017 -80736295 + (TC)n Simple_repeat Simple_repeat 1 27 0 8 886 1021 270 95 39 chr13 39549114 39549473 -80734839 + MTE2b LTR MaLR 1 379 0 9 886 182 37 0 36 chr13 39549926 39549954 -80734358 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 9 886 534 31 0 0 chr13 39551643 39551707 -80732605 + (CA)n Simple_repeat Simple_repeat 2 65 0 9 886 258 251 229 33 chr13 39551811 39552025 -80732287 - MLT1K LTR MaLR -72 523 268 9 886 510 114 0 0 chr13 39552307 39552386 -80731926 + (CA)n Simple_repeat Simple_repeat 2 80 0 9 886 530 309 115 11 chr13 39553551 39553734 -80730578 - Lx8 LINE L1 -144 7329 7128 9 886 233 146 0 20 chr13 39553851 39553900 -80730412 + A-rich Low_complexity Low_complexity 4 51 0 9 886 609 40 0 0 chr13 39553901 39553977 -80730335 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 9 886 445 336 7 27 chr13 39554371 39554521 -80729791 - B3A SINE B2 0 198 52 9 886 396 0 0 0 chr13 39554726 39554770 -80729542 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 886 207 161 0 0 chr13 39554986 39555017 -80729295 - L3 LINE CR1 -3547 942 912 1 886 22 0 0 0 chr13 39555017 39555039 -80729273 + AT_rich Low_complexity Low_complexity 1 22 0 1 886 189 0 0 0 chr13 39555392 39555413 -80728899 + (T)n Simple_repeat Simple_repeat 1 21 0 1 886 1069 240 55 164 chr13 39556233 39556636 -80727676 + ORR1E LTR MaLR 1 359 0 1 886 1077 89 0 0 chr13 39556906 39557041 -80727271 + B1_Mus1 SINE Alu 1 135 -13 1 886 270 0 0 0 chr13 39557041 39557071 -80727241 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 1 886 531 309 29 0 chr13 39557122 39557261 -80727051 - B1F SINE Alu -5 144 2 1 886 441 0 0 0 chr13 39557458 39557507 -80726805 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 886 2637 279 99 99 chr13 39558354 39560265 -80724047 - Lx9 LINE L1 -1 7643 5733 1 886 579 51 0 0 chr13 39560433 39560512 -80723800 + (TC)n Simple_repeat Simple_repeat 2 80 0 1 886 1425 85 0 6 chr13 39560512 39560690 -80723622 - B2_Mm2 SINE B2 -17 178 2 1 886 684 272 6 36 chr13 39562190 39562358 -80721954 + RSINE1 SINE B4 3 165 0 1 886 238 132 19 19 chr13 39562397 39562451 -80721861 + (TAA)n Simple_repeat Simple_repeat 1 54 0 1 886 234 128 0 0 chr13 39562705 39562744 -80721568 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 886 423 298 107 8 chr13 39562757 39562879 -80721433 - RSINE1 SINE B4 -21 144 11 1 886 830 260 92 35 chr13 39563671 39563898 -80720414 + B4A SINE B4 30 269 -23 1 886 324 0 0 0 chr13 39563898 39563934 -80720378 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 886 222 246 0 0 chr13 39567335 39567396 -80716916 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 886 1371 50 0 0 chr13 39567452 39567632 -80716680 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 886 194 77 0 71 chr13 39568439 39568481 -80715831 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 886 7420 62 27 21 chr13 39568509 39569916 -80714396 - L1_Mus2 LINE L1 0 6566 5152 1 886 442 185 25 0 chr13 39569913 39569994 -80714318 + L1_Mm LINE L1 5085 5167 -716 1 886 190 0 67 0 chr13 39570208 39570238 -80714074 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 886 1068 102 0 0 chr13 39570241 39570378 -80713934 - B1_Mus2 SINE Alu -10 137 1 1 886 476 276 91 80 chr13 39570683 39570947 -80713365 + RLTR18 LTR ERVK 346 612 -4 1 886 507 113 0 40 chr13 39572760 39572861 -80711451 + CT-rich Low_complexity Low_complexity 4 100 0 1 886 279 71 0 0 chr13 39572862 39572904 -80711408 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 886 2434 89 49 31 chr13 39573369 39573487 -80710825 - Lx LINE L1 -7 6647 6536 1 886 261 0 0 0 chr13 39573487 39573516 -80710796 + (CCCA)n Simple_repeat Simple_repeat 1 29 0 1 886 2434 89 49 31 chr13 39573516 39573746 -80710566 - Lx LINE L1 -119 6535 6295 1 886 200 310 0 17 chr13 39573862 39573921 -80710391 + GA-rich Low_complexity Low_complexity 3 60 0 1 886 309 250 111 28 chr13 39574247 39574428 -80709884 - L1MEc LINE L1 -4033 2367 2172 1 886 301 299 56 48 chr13 39574569 39574785 -80709527 - L1MEc LINE L1 -4491 1909 1691 1 886 1195 88 0 7 chr13 39574785 39574934 -80709378 - B1_Mus1 SINE Alu 0 148 1 1 886 301 299 56 48 chr13 39574934 39574966 -80709346 - L1MEc LINE L1 -4710 1690 1659 1 886 1076 57 0 21 chr13 39574970 39575113 -80709199 + L1Md_F3 LINE L1 6444 6583 -1 1 886 1567 258 15 5 chr13 39575123 39575513 -80708799 - Lx6 LINE L1 -19 7441 7048 1 886 6462 204 43 24 chr13 39575511 39577333 -80706979 - Lx6 LINE L1 -930 6530 4643 1 886 4103 145 46 25 chr13 39577333 39578011 -80706301 + RLTR17 LTR ERVK 1 692 0 1 886 6462 191 19 21 chr13 39578011 39578041 -80706271 - Lx6 LINE L1 -1238 4642 4619 1 886 2487 211 165 120 chr13 39578047 39578887 -80705425 - Lx6 LINE L1 -1692 4185 2884 1 886 768 185 40 71 chr13 39578887 39579085 -80705227 - B2_Mm2 SINE B2 -2 193 2 1 886 2487 162 16 243 chr13 39579085 39579777 -80704535 - Lx6 LINE L1 -2997 2883 2407 1 886 921 196 0 0 chr13 39579778 39579916 -80704396 + B1_Mur4 SINE Alu 2 139 -11 1 886 231 140 0 0 chr13 39580106 39580156 -80704156 + (T)n Simple_repeat Simple_repeat 1 50 0 1 886 408 330 26 0 chr13 39580571 39580686 -80703626 - B4A SINE B4 -161 131 14 1 886 401 306 188 44 chr13 39580906 39581289 -80703023 - RMER5 LTR ERV1 -47 487 50 1 886 374 344 16 39 chr13 39582820 39582947 -80701365 - ID_B1 SINE B4 -21 203 80 1 886 327 65 0 0 chr13 39582968 39583014 -80701298 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 886 282 321 37 0 chr13 39583030 39583111 -80701201 - RSINE1 SINE B4 -79 86 3 1 887 302 288 119 25 chr13 39584242 39584402 -80699910 - MLT1A LTR MaLR -35 339 165 1 887 378 0 0 0 chr13 39586799 39586841 -80697471 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 887 254 312 77 39 chr13 39586896 39587026 -80697286 - MLT1A LTR MaLR -331 136 2 1 887 439 261 24 56 chr13 39587390 39587516 -80696796 + ID_B1 SINE B4 72 193 -31 1 887 254 311 26 62 chr13 39587418 39587531 -80696781 + B1_Mur4 SINE Alu 18 126 -24 1 887 1979 216 29 12 chr13 39587604 39587711 -80696601 + MTD LTR MaLR 3 115 -304 1 887 306 0 0 0 chr13 39587711 39587745 -80696567 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 1 887 1979 216 29 12 chr13 39587745 39588045 -80696267 + MTD LTR MaLR 116 416 -3 1 887 232 200 0 16 chr13 39588220 39588281 -80696031 + T-rich Low_complexity Low_complexity 1 60 0 1 887 930 307 82 20 chr13 39588384 39588776 -80695536 - Lx9 LINE L1 -147 7497 7082 1 887 559 246 20 34 chr13 39588780 39588927 -80695385 - B1_Mur1 SINE Alu -3 146 2 1 887 407 262 26 53 chr13 39589049 39589162 -80695150 + B1F2 SINE Alu 1 110 -39 1 887 667 337 12 0 chr13 39589176 39589342 -80694970 + B3A SINE B2 1 168 -30 1 887 3475 112 48 14 chr13 39589478 39589993 -80694319 - RMER16 LTR ERVK 0 533 1 1 887 315 0 0 0 chr13 39590025 39590060 -80694252 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 887 366 23 0 0 chr13 39590060 39590102 -80694210 + (TATG)n Simple_repeat Simple_repeat 4 46 0 1 887 2035 145 60 0 chr13 39591511 39591842 -80692470 + Lx3B LINE L1 6620 6970 -3 1 887 186 43 0 0 chr13 39591849 39591872 -80692440 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 887 266 118 0 38 chr13 39592019 39592072 -80692240 + (TATATG)n Simple_repeat Simple_repeat 6 56 0 1 887 319 325 62 38 chr13 39592501 39592712 -80691600 - L1MDa LINE L1 -5350 1283 1068 1 887 278 267 69 0 chr13 39592714 39592815 -80691497 - L1MDa LINE L1 -6444 189 82 1 887 1262 239 69 21 chr13 39592812 39593201 -80691111 - Lx9 LINE L1 -7 7637 7230 1 887 447 145 0 0 chr13 39594972 39595055 -80689257 + (GA)n Simple_repeat Simple_repeat 1 83 0 1 887 698 300 67 57 chr13 39595981 39596279 -80688033 - MT2A LTR ERVL -160 373 73 1 887 799 98 0 0 chr13 39596279 39596391 -80687921 + B2_Mm2 SINE B2 3 114 -81 1 887 396 0 0 0 chr13 39596501 39596545 -80687767 + (TCTG)n Simple_repeat Simple_repeat 4 47 0 1 887 915 242 79 126 chr13 39596886 39597377 -80686935 + RLTR12B LTR ERVK 41 508 -20 1 887 3759 8 5 0 chr13 39598352 39598746 -80685566 - MTA_Mm LTR MaLR 0 396 1 1 887 389 20 0 0 chr13 39598746 39598796 -80685516 - MTA_Mm-int LTR MaLR 0 1098 1049 1 887 2968 45 0 3 chr13 39598796 39599134 -80685178 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 887 22112 33 40 14 chr13 39599134 39601810 -80682502 + IAPEz-int LTR ERVK 8 2751 -3730 1 887 29420 15 1 2 chr13 39601802 39605043 -80679269 + IAPEz-int LTR ERVK 3244 6481 0 1 887 2514 71 6 30 chr13 39605043 39605376 -80678936 + IAPLTR1a_Mm LTR ERVK 1 325 -2 1 887 8680 24 2 0 chr13 39605381 39606433 -80677879 - MTA_Mm-int LTR MaLR -44 1054 1 1 887 3759 8 5 0 chr13 39606433 39606827 -80677485 - MTA_Mm LTR MaLR 0 396 1 1 887 609 304 42 46 chr13 39607010 39607293 -80677019 + B4A SINE B4 1 282 -10 1 887 941 123 14 21 chr13 39607443 39607579 -80676733 + B1_Mur4 SINE Alu 2 137 -13 1 887 213 39 0 0 chr13 39607579 39607605 -80676707 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1 887 23 0 0 0 chr13 39609456 39609479 -80674833 + AT_rich Low_complexity Low_complexity 1 23 0 1 887 1722 141 104 7 chr13 39609637 39609944 -80674368 - MTC LTR MaLR -2 419 83 1 887 426 79 0 0 chr13 39609951 39610014 -80674298 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 887 284 311 0 0 chr13 39610021 39610124 -80674188 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 887 546 302 0 0 chr13 39610141 39610320 -80673992 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 887 1174 75 0 20 chr13 39610630 39610780 -80673532 + B1_Mm SINE Alu 1 147 0 1 887 198 0 0 0 chr13 39610783 39610805 -80673507 + (A)n Simple_repeat Simple_repeat 1 22 0 1 887 3290 75 22 14 chr13 39611268 39611777 -80672535 + L1_Mus4 LINE L1 6124 6636 0 1 887 244 254 0 0 chr13 39613637 39613692 -80670620 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 887 23 33 0 0 chr13 39613749 39613779 -80670533 + AT_rich Low_complexity Low_complexity 1 30 0 1 887 570 355 71 28 chr13 39613820 39614142 -80670170 - MER2 DNA MER2_type 0 345 10 1 887 432 0 0 0 chr13 39614240 39614288 -80670024 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 887 202 29 0 54 chr13 39616556 39616593 -80667719 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 887 28 61 0 0 chr13 39617142 39617191 -80667121 + AT_rich Low_complexity Low_complexity 1 49 0 1 887 224 250 19 0 chr13 39617900 39617952 -80666360 + (TATG)n Simple_repeat Simple_repeat 3 55 0 1 887 22 0 0 0 chr13 39618019 39618041 -80666271 + AT_rich Low_complexity Low_complexity 1 22 0 1 887 269 275 0 48 chr13 39618050 39618134 -80666178 + ID4 SINE ID 3 82 -1 1 887 588 274 17 106 chr13 39618385 39618622 -80665690 + B3 SINE B2 1 216 0 1 887 207 0 0 0 chr13 39618630 39618653 -80665659 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 887 456 283 134 36 chr13 39618790 39618984 -80665328 - B3A SINE B2 -3 213 1 1 887 180 0 0 0 chr13 39620273 39620293 -80664019 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 887 981 88 0 0 chr13 39620293 39620429 -80663883 + (GGGAGA)n Simple_repeat Simple_repeat 3 139 0 1 887 839 10 10 0 chr13 39620936 39621036 -80663276 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 1 887 746 104 0 0 chr13 39621139 39621245 -80663067 + L1_Mus3 LINE L1 6129 6234 -404 1 887 3717 79 6 2 chr13 39621245 39621740 -80662572 + L1_Mus3 LINE L1 6136 6632 -6 1 887 22 0 0 0 chr13 39621755 39621777 -80662535 + AT_rich Low_complexity Low_complexity 1 22 0 1 887 2299 184 35 20 chr13 39622205 39622660 -80661652 - Lx4B LINE L1 -2 7056 6595 1 887 567 272 46 56 chr13 39623052 39623247 -80661065 - RMER30 DNA MER1_type -1 201 9 1 887 24 0 0 0 chr13 39625327 39625351 -80658961 + AT_rich Low_complexity Low_complexity 1 24 0 1 887 24 0 0 0 chr13 39625759 39625783 -80658529 + AT_rich Low_complexity Low_complexity 1 24 0 1 887 251 297 62 8 chr13 39625784 39625913 -80658399 + L1M5 LINE L1 2305 2440 -3706 2 887 441 0 0 0 chr13 39626120 39626169 -80658143 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 887 215 274 30 75 chr13 39626611 39626678 -80657634 + ID SINE ID 2 65 -159 2 887 945 134 0 0 chr13 39626678 39626850 -80657462 + (TC)n Simple_repeat Simple_repeat 1 172 0 2 887 1113 146 16 5 chr13 39626949 39627135 -80657177 + B2_Mm2 SINE B2 3 190 -5 2 887 312 336 71 21 chr13 39627372 39627512 -80656800 + L1M5 LINE L1 4806 4952 -1194 2 887 289 364 53 53 chr13 39627836 39628042 -80656270 + B4 SINE B4 10 215 -77 2 887 402 79 0 0 chr13 39628661 39628724 -80655588 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 887 516 279 23 64 chr13 39629108 39629280 -80655032 - RSINE1 SINE B4 0 165 1 2 887 261 312 25 0 chr13 39632390 39632470 -80651842 - BC1_Mm scRNA scRNA -51 101 20 2 887 1046 274 116 14 chr13 39632610 39632954 -80651358 - MTEa LTR MaLR 0 379 1 2 887 1077 177 5 25 chr13 39634210 39634413 -80649899 + URR1A DNA MER1_type 28 226 0 2 887 697 88 26 9 chr13 39635426 39635447 -80648865 + (TTTTC)n Simple_repeat Simple_repeat 1 21 0 2 887 1109 123 0 6 chr13 39635447 39635627 -80648685 + (TTTCC)n Simple_repeat Simple_repeat 2 180 0 2 887 697 88 26 9 chr13 39635627 39635719 -80648593 + (TTTTC)n Simple_repeat Simple_repeat 1 95 0 2 887 503 118 12 0 chr13 39635713 39635798 -80648514 + (TCC)n Simple_repeat Simple_repeat 3 88 0 2 887 21 0 0 0 chr13 39636377 39636398 -80647914 + AT_rich Low_complexity Low_complexity 1 21 0 2 887 36374 16 4 7 chr13 39636403 39642004 -80642308 + L1Md_A LINE L1 7 5586 -297 2 887 8718 21 0 0 chr13 39642004 39642999 -80641313 + L1Md_A LINE L1 5587 6581 -1 2 887 261 0 0 0 chr13 39644522 39644551 -80639761 + (GA)n Simple_repeat Simple_repeat 1 29 0 2 887 292 256 31 39 chr13 39645399 39645512 -80638800 + (TAGA)n Simple_repeat Simple_repeat 4 117 0 2 887 465 104 0 0 chr13 39645512 39645589 -80638723 + (CATA)n Simple_repeat Simple_repeat 1 77 0 2 887 292 256 31 39 chr13 39645589 39645605 -80638707 + (TAGA)n Simple_repeat Simple_repeat 2 16 0 2 887 549 0 0 0 chr13 39645658 39645719 -80638593 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 2 887 564 62 0 0 chr13 39646545 39646626 -80637686 + (CA)n Simple_repeat Simple_repeat 2 82 0 2 887 349 298 70 0 chr13 39646802 39646916 -80637396 - MER82 DNA MER2_type -411 242 121 2 887 5074 68 31 16 chr13 39648855 39649554 -80634758 - L1Md_F2 LINE L1 -9 6573 5864 2 887 205 171 0 0 chr13 39649853 39649888 -80634424 + (AGATG)n Simple_repeat Simple_repeat 2 36 0 2 887 703 331 77 54 chr13 39649992 39650305 -80634007 + MLT1A0 LTR MaLR 10 329 -36 2 887 1030 270 35 83 chr13 39651722 39652097 -80632215 - ORR1E LTR MaLR -2 357 1 2 887 275 339 68 47 chr13 39652686 39652921 -80631391 + Tigger5 DNA MER2_type 1 240 -2166 2 887 933 281 92 12 chr13 39653486 39653832 -80630480 + MTE2a LTR MaLR 3 376 -3 2 887 249 293 61 0 chr13 39653862 39653944 -80630368 + 4.5SRNA scRNA scRNA 5 91 -3 2 887 680 253 41 51 chr13 39653944 39654094 -80630218 + B3A SINE B2 2 154 -44 2 887 189 0 0 0 chr13 39654094 39654115 -80630197 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 887 680 253 41 51 chr13 39654115 39654160 -80630152 + B3A SINE B2 155 195 -3 2 887 195 42 0 0 chr13 39656542 39656566 -80627746 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 887 372 338 64 90 chr13 39656878 39657223 -80627089 - ORR1E LTR MaLR 0 359 24 2 887 240 0 0 0 chr13 39657877 39657906 -80626406 - L1_Mus2 LINE L1 -233 6333 6305 2 887 405 136 62 0 chr13 39657899 39657980 -80626332 + L1_Mus3 LINE L1 6208 6293 -345 2 887 2159 296 61 21 chr13 39657980 39658820 -80625492 - ERVL-B4-int LTR ERVL -986 4728 3856 2 887 1299 315 37 23 chr13 39658805 39659406 -80624906 - ERVL-B4-int LTR ERVL -1832 3929 3321 2 887 2826 101 25 2 chr13 39659969 39660367 -80623945 + MTB_Mm LTR MaLR 1 407 0 2 887 264 122 0 0 chr13 39663613 39663654 -80620658 + (GAAAA)n Simple_repeat Simple_repeat 2 42 0 2 887 357 93 0 0 chr13 39664583 39664637 -80619675 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 887 224 339 143 77 chr13 39664668 39664927 -80619385 - B4 SINE B4 -16 276 1 2 887 245 89 22 0 chr13 39665052 39665097 -80619215 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 887 297 0 0 0 chr13 39665098 39665131 -80619181 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 887 429 308 122 24 chr13 39665395 39665641 -80618671 - MLT1D LTR MaLR -214 291 22 2 887 975 137 0 0 chr13 39665725 39665886 -80618426 + (TA)n Simple_repeat Simple_repeat 1 161 0 2 887 701 272 138 56 chr13 39665886 39666205 -80618107 + ORR1E LTR MaLR 2 346 -13 2 887 269 310 70 115 chr13 39666263 39666507 -80617805 + MLT2B1 LTR ERVL 1 233 -287 2 887 1090 289 45 13 chr13 39666356 39666668 -80617644 + MTE2b LTR MaLR 58 379 0 2 887 339 354 71 24 chr13 39666995 39667374 -80616938 + MLT2C1 LTR ERVL 1 397 0 2 887 277 286 34 105 chr13 39667401 39667639 -80616673 - L1MC4 LINE L1 -604 7438 7218 2 887 303 281 23 74 chr13 39667969 39668184 -80616128 - L1MC4 LINE L1 -1017 7025 6822 2 887 552 282 140 6 chr13 39668307 39668471 -80615841 - B3 SINE B2 -29 187 2 2 887 1083 177 105 20 chr13 39668538 39668832 -80615480 - Lx9 LINE L1 -6 7638 7320 2 887 303 316 85 5 chr13 39669117 39669305 -80615007 - L1M5 LINE L1 -625 5819 5617 2 887 389 279 29 9 chr13 39669551 39669656 -80614656 + PB1D10 SINE Alu 11 117 0 2 887 224 122 24 0 chr13 39669662 39669703 -80614609 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 2 887 471 312 49 78 chr13 39669707 39670115 -80614197 + L1MEc LINE L1 1270 1735 -4680 2 887 267 31 0 0 chr13 39670618 39670650 -80613662 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 887 323 172 40 17 chr13 39672528 39672645 -80611667 + L1M4c LINE L1 1269 1422 -5147 2 887 21 57 0 0 chr13 39672850 39672885 -80611427 + AT_rich Low_complexity Low_complexity 1 35 0 2 887 463 337 78 57 chr13 39673508 39673791 -80610521 - B4A SINE B4 -2 290 2 2 887 261 140 0 0 chr13 39673910 39673967 -80610345 + (A)n Simple_repeat Simple_repeat 1 57 0 2 887 381 329 90 61 chr13 39675071 39675411 -80608901 + L1ME2 LINE L1 5589 5946 -296 2 887 769 371 64 35 chr13 39676857 39677338 -80606974 + MER74A LTR ERVL 10 504 -54 2 887 724 332 73 69 chr13 39677512 39677988 -80606324 - MLT2B3 LTR ERVL -76 478 1 2 887 1187 55 0 0 chr13 39678783 39678929 -80605383 - B1_Mus2 SINE Alu -1 146 1 2 887 415 326 45 53 chr13 39679484 39679730 -80604582 + RMER15 LTR ERVL 296 539 -36 2 887 1211 192 160 14 chr13 39679739 39679824 -80604488 - RLTR20A2 LTR ERVK -12 566 447 2 887 459 0 0 0 chr13 39679824 39679875 -80604437 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 887 1211 220 130 17 chr13 39679875 39680170 -80604142 - RLTR20A2 LTR ERVK -99 479 48 2 887 384 388 25 10 chr13 39680646 39680844 -80603468 - LTR16E2 LTR ERVL -8 560 360 2 887 412 341 71 86 chr13 39682383 39682874 -80601438 + MER21B LTR ERV1 180 663 -200 2 887 248 352 57 0 chr13 39683455 39683560 -80600752 - ORR1E LTR MaLR -224 135 25 2 887 472 387 52 62 chr13 39683564 39683889 -80600423 - MLT1A0 LTR MaLR -41 324 3 2 887 459 0 0 0 chr13 39684446 39684497 -80599815 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 887 287 337 65 86 chr13 39684790 39685069 -80599243 + MLT1F-int LTR MaLR 1133 1405 -84 2 887 2728 62 9 0 chr13 39685800 39686139 -80598173 + ORR1A1 LTR MaLR 5 346 0 2 887 395 105 0 0 chr13 39686139 39686196 -80598116 + ORR1A1-int LTR MaLR 1 57 -1452 2 887 8045 26 2 3 chr13 39686216 39687300 -80597012 - L1Md_T LINE L1 0 6582 5502 2 887 27417 22 0 9 chr13 39687300 39691276 -80593036 - L1Md_T LINE L1 -1305 4578 646 2 887 12583 74 6 12 chr13 39691276 39693045 -80591267 + ORR1A1-int LTR MaLR 35 1792 0 2 887 2835 58 0 0 chr13 39693045 39693391 -80590921 + ORR1A1 LTR MaLR 1 346 0 2 887 1210 185 49 32 chr13 39693415 39693700 -80590612 - L1_Mur2 LINE L1 -735 5142 4853 2 887 1105 227 96 41 chr13 39693884 39694228 -80590084 - ORR1D2 LTR MaLR -3 367 5 2 887 194 211 35 0 chr13 39694781 39694838 -80589474 + T-rich Low_complexity Low_complexity 5 63 0 2 887 833 157 7 0 chr13 39694835 39694988 -80589324 + CT-rich Low_complexity Low_complexity 1 154 0 2 887 387 306 0 65 chr13 39694988 39695142 -80589170 - B1_Mur2 SINE Alu -5 144 1 2 887 254 257 43 0 chr13 39696477 39696547 -80587765 + ID4 SINE ID 2 74 -9 2 887 24 0 0 0 chr13 39697290 39697314 -80586998 + AT_rich Low_complexity Low_complexity 1 24 0 2 887 363 309 66 7 chr13 39697323 39697460 -80586852 + RSINE1 SINE B4 2 146 -19 2 887 432 0 0 0 chr13 39697474 39697522 -80586790 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 887 366 23 0 0 chr13 39697522 39697564 -80586748 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 887 532 0 29 0 chr13 39698055 39698123 -80586189 + (TG)n Simple_repeat Simple_repeat 1 70 0 2 887 259 371 0 0 chr13 39698125 39698214 -80586098 - RMER15 LTR ERVL -116 459 371 2 887 398 254 0 95 chr13 39698475 39698601 -80585711 - PB1D10 SINE Alu -3 114 1 2 887 24 0 0 0 chr13 39699735 39699759 -80584553 + AT_rich Low_complexity Low_complexity 1 24 0 2 887 199 79 26 26 chr13 39699813 39699852 -80584460 + (TTAGGG)n Simple_repeat Simple_repeat 2 40 0 2 887 187 167 0 106 chr13 39699889 39699936 -80584376 - MIR3 SINE MIR -53 155 114 2 887 526 324 44 34 chr13 39700278 39700746 -80583566 + L1M5 LINE L1 2611 3099 -3047 2 887 478 43 14 14 chr13 39701496 39701566 -80582746 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 887 342 359 36 68 chr13 39701578 39701799 -80582513 + Tigger9a DNA Tigger 260 473 -259 2 887 459 289 73 13 chr13 39701836 39701987 -80582325 + Tigger9a DNA Tigger 572 731 -1 2 887 189 366 16 31 chr13 39702102 39702229 -80582083 + L3 LINE CR1 3601 3725 -764 2 887 809 47 9 0 chr13 39703018 39703124 -80581188 + (TTCC)n Simple_repeat Simple_repeat 3 109 0 2 887 196 404 29 0 chr13 39703924 39704028 -80580284 - MER5A DNA MER1_type -69 120 14 2 887 513 47 0 0 chr13 39704416 39704480 -80579832 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 887 221 178 0 62 chr13 39704847 39704895 -80579417 + A-rich Low_complexity Low_complexity 4 48 0 2 887 314 247 12 24 chr13 39706768 39706851 -80577461 - ID4_ SINE ID -1 82 1 3 887 287 318 23 12 chr13 39708055 39708141 -80576171 - MER2 DNA MER2_type -3 342 256 3 887 1197 55 0 7 chr13 39708150 39708298 -80576014 + B1_Mus2 SINE Alu 1 147 0 3 887 628 298 33 11 chr13 39708313 39708496 -80575816 + B3A SINE B2 7 193 -5 3 887 201 74 0 0 chr13 39708513 39708540 -80575772 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 887 423 0 0 0 chr13 39708594 39708641 -80575671 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 887 394 264 66 20 chr13 39708658 39708809 -80575503 - MER2 DNA MER2_type -139 206 49 3 887 459 113 0 0 chr13 39709106 39709177 -80575135 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 887 248 362 0 17 chr13 39709180 39709298 -80575014 + GA-rich Low_complexity Low_complexity 2 117 0 3 887 1106 76 0 7 chr13 39710006 39710140 -80574172 + B1_Mus1 SINE Alu 4 137 -11 3 887 423 0 0 0 chr13 39710140 39710187 -80574125 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 887 1106 76 0 7 chr13 39710187 39710198 -80574114 + B1_Mus1 SINE Alu 138 148 0 3 887 444 289 92 31 chr13 39710420 39710713 -80573599 + L1M4 LINE L1 3124 3434 -2712 3 887 241 358 79 25 chr13 39710795 39711274 -80573038 + L1M4 LINE L1 3502 4006 -2140 3 887 201 39 0 0 chr13 39711339 39711365 -80572947 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 3 887 246 255 62 54 chr13 39711443 39711555 -80572757 + L1M4 LINE L1 4129 4241 -1899 3 887 1096 309 68 21 chr13 39711966 39712777 -80571535 + L1M4 LINE L1 4500 5348 -798 3 887 259 260 29 20 chr13 39713109 39713211 -80571101 + L1M4 LINE L1 5760 5862 -322 3 887 192 40 0 0 chr13 39713754 39713779 -80570533 + (A)n Simple_repeat Simple_repeat 1 25 0 3 887 436 277 30 15 chr13 39714052 39714184 -80570128 - B3A SINE B2 -64 134 1 3 888 276 337 52 40 chr13 39715205 39715347 -80568965 + ERVL-B4-int LTR ERVL 4315 4465 -1249 3 888 3554 51 9 2 chr13 39715347 39715780 -80568532 - RLTR10C LTR ERVK 0 436 1 3 888 276 337 52 40 chr13 39715780 39715810 -80568502 + ERVL-B4-int LTR ERVL 4466 4489 -1225 3 888 1164 40 39 15 chr13 39715900 39716319 -80567993 + (TCTA)n Simple_repeat Simple_repeat 1 429 0 3 888 249 82 66 0 chr13 39717269 39717330 -80566982 + (TTTG)n Simple_repeat Simple_repeat 4 68 0 3 888 325 309 45 32 chr13 39717530 39717687 -80566625 + L1M5 LINE L1 3071 3229 -2917 3 888 342 0 0 0 chr13 39717856 39717894 -80566418 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 888 915 199 73 0 chr13 39718294 39718485 -80565827 + B3 SINE B2 12 216 0 3 888 256 210 0 147 chr13 39720441 39720536 -80563776 + MIR SINE MIR 182 262 0 3 888 289 282 41 91 chr13 39721462 39721583 -80562729 - L2 LINE L2 -951 2468 2354 3 888 526 304 111 36 chr13 39722228 39722562 -80561750 - MER31A LTR ERV1 -66 419 61 3 888 287 308 41 50 chr13 39723048 39723147 -80561165 - PB1D10 SINE Alu -11 138 31 3 888 201 74 0 0 chr13 39724351 39724378 -80559934 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 3 888 180 0 0 0 chr13 39724974 39724994 -80559318 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 888 806 294 33 12 chr13 39725072 39725308 -80559004 + B4A SINE B4 4 244 -48 3 888 480 35 0 0 chr13 39725308 39725366 -80558946 + (TC)n Simple_repeat Simple_repeat 1 58 0 3 888 22 0 0 0 chr13 39725458 39725480 -80558832 + AT_rich Low_complexity Low_complexity 1 22 0 3 888 251 28 28 0 chr13 39726318 39726354 -80557958 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 3 888 198 321 65 36 chr13 39727078 39727217 -80557095 - MIRc SINE MIR -52 216 74 3 888 1045 308 101 20 chr13 39727369 39727923 -80556389 + Lx8 LINE L1 6655 7253 -220 3 888 1603 37 5 0 chr13 39728317 39728507 -80555805 + B2_Mm1t SINE B2 1 191 -2 3 888 660 267 67 31 chr13 39729668 39729861 -80554451 - RMER30 DNA MER1_type -2 200 1 3 888 1939 137 69 6 chr13 39730017 39730363 -80553949 + RLTR9A LTR ERVK 1 368 0 3 888 333 0 0 0 chr13 39731351 39731388 -80552924 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 888 392 351 54 0 chr13 39731389 39731557 -80552755 - B3A SINE B2 -19 179 3 3 888 231 258 100 70 chr13 39731661 39731761 -80552551 + LTR75_1 LTR ERV1 216 318 -228 3 888 268 263 88 42 chr13 39732224 39732516 -80551796 - L1MA4A LINE L1 -5 6295 5968 3 888 196 358 58 39 chr13 39732789 39732943 -80551369 + MIR SINE MIR 2 158 -104 3 888 276 333 10 41 chr13 39733183 39733280 -80551032 + RSINE1 SINE B4 3 96 -69 3 888 198 0 0 0 chr13 39734678 39734700 -80549612 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 3 888 21 0 0 0 chr13 39735797 39735818 -80548494 + AT_rich Low_complexity Low_complexity 1 21 0 3 888 294 29 0 0 chr13 39736087 39736122 -80548190 + (TTA)n Simple_repeat Simple_repeat 2 36 0 3 888 217 163 0 20 chr13 39736409 39736459 -80547853 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 3 888 471 260 124 16 chr13 39736464 39736593 -80547719 - RSINE1 SINE B4 -21 144 2 3 888 363 73 0 0 chr13 39736719 39736774 -80547538 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 888 384 339 16 16 chr13 39736806 39736935 -80547377 - B4A SINE B4 -15 277 149 3 888 23 33 0 0 chr13 39740426 39740456 -80543856 + AT_rich Low_complexity Low_complexity 1 30 0 3 888 22 35 0 0 chr13 39740903 39740932 -80543380 + AT_rich Low_complexity Low_complexity 1 29 0 3 888 246 105 0 0 chr13 39742132 39742170 -80542142 + (CAGAA)n Simple_repeat Simple_repeat 4 41 0 3 888 934 287 32 28 chr13 39742975 39743244 -80541068 + B4A SINE B4 1 271 -21 3 888 339 25 0 0 chr13 39743244 39743284 -80541028 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 888 934 287 32 28 chr13 39743284 39743297 -80541015 + B4A SINE B4 272 284 -8 3 888 381 93 0 0 chr13 39743317 39743371 -80540941 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 888 249 33 0 0 chr13 39743372 39743402 -80540910 + (GA)n Simple_repeat Simple_repeat 1 30 0 3 888 533 15 15 0 chr13 39743532 39743598 -80540714 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 888 715 181 38 0 chr13 39743644 39743777 -80540535 + B1_Mur2 SINE Alu 12 149 0 3 888 387 0 0 0 chr13 39743827 39743870 -80540442 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 888 531 263 115 80 chr13 39744502 39744866 -80539446 + MTEa LTR MaLR 1 377 -2 3 888 291 114 0 0 chr13 39745109 39745153 -80539159 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 888 402 287 36 33 chr13 39745170 39745384 -80538928 - B4A SINE B4 -29 263 2 3 888 682 232 98 16 chr13 39746052 39746245 -80538067 - Lx6 LINE L1 -12 7448 7240 3 888 1228 266 56 9 chr13 39749108 39749449 -80534863 + MTEb LTR MaLR 1 357 -22 3 888 888 172 21 0 chr13 39749807 39749952 -80534360 + B1_Mur4 SINE Alu 1 148 -2 3 888 359 293 188 54 chr13 39750017 39750500 -80533812 + L1MA8 LINE L1 4630 5177 -966 3 888 340 134 101 29 chr13 39750585 39750606 -80533706 - HAL1-3A_ME LINE L1 -810 2048 2027 3 888 453 19 0 0 chr13 39750606 39750660 -80533652 + (TCTCTG)n Simple_repeat Simple_repeat 6 59 0 3 888 340 134 101 29 chr13 39750660 39750707 -80533605 - HAL1-3A_ME LINE L1 -832 2026 1975 3 888 214 197 0 73 chr13 39750711 39750793 -80533519 + T-rich Low_complexity Low_complexity 2 77 0 3 888 291 261 56 11 chr13 39750796 39750885 -80533427 - PB1D9 SINE Alu -1 119 27 3 888 351 0 0 0 chr13 39750885 39750924 -80533388 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 888 962 321 42 17 chr13 39751020 39751381 -80532931 - MTE2b LTR MaLR -7 372 3 3 888 632 264 83 44 chr13 39751382 39751767 -80532545 + L1MA8 LINE L1 5444 5843 -448 3 888 255 31 0 0 chr13 39751909 39751941 -80532371 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 888 216 0 0 0 chr13 39751962 39751986 -80532326 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 888 907 241 116 8 chr13 39751994 39752262 -80532050 - ORR1D1 LTR MaLR -73 301 5 3 888 271 290 32 53 chr13 39752351 39752508 -80531804 + L1MA8 LINE L1 5990 6149 -163 3 888 370 333 8 0 chr13 39752515 39752647 -80531665 + (CA)n Simple_repeat Simple_repeat 2 134 0 3 888 313 262 78 26 chr13 39752647 39752800 -80531512 + L1MA8 LINE L1 6152 6312 0 3 888 408 111 0 0 chr13 39753388 39753460 -80530852 + (CA)n Simple_repeat Simple_repeat 2 73 0 3 888 417 86 0 0 chr13 39753473 39753531 -80530781 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 888 306 0 0 0 chr13 39753531 39753565 -80530747 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 888 461 296 8 0 chr13 39754090 39754215 -80530097 + ID_B1 SINE B4 97 222 -2 3 888 281 285 47 136 chr13 39754623 39754639 -80529673 - ORR1E LTR MaLR -167 192 181 3 888 3303 35 5 2 chr13 39754639 39755034 -80529278 - MTA_Mm LTR MaLR 0 396 1 3 888 281 285 47 136 chr13 39755034 39755208 -80529104 - ORR1E LTR MaLR -179 180 19 3 888 231 114 0 0 chr13 39756462 39756497 -80527815 + (CTAA)n Simple_repeat Simple_repeat 1 35 0 3 888 342 0 0 0 chr13 39756497 39756535 -80527777 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 888 443 305 21 28 chr13 39756551 39756696 -80527616 - RSINE1 SINE B4 -21 144 1 3 888 1343 79 11 0 chr13 39756855 39757032 -80527280 - B2_Mm1t SINE B2 -14 179 1 3 888 461 271 14 142 chr13 39757058 39757269 -80527043 - B3A SINE B2 -10 188 5 3 888 240 86 0 0 chr13 39757302 39757337 -80526975 + (A)n Simple_repeat Simple_repeat 1 35 0 3 888 285 322 0 0 chr13 39757387 39757446 -80526866 + PB1D7 SINE Alu 54 112 -8 3 888 209 140 0 23 chr13 39758570 39758614 -80525698 + (CATA)n Simple_repeat Simple_repeat 4 46 0 3 888 26 50 0 0 chr13 39758947 39758987 -80525325 + AT_rich Low_complexity Low_complexity 1 40 0 3 888 622 362 0 0 chr13 39760226 39760403 -80523909 - B3 SINE B2 -38 178 2 3 888 285 75 0 0 chr13 39761825 39761865 -80522447 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 888 558 272 134 13 chr13 39762142 39762373 -80521939 - MER121 Unknown Unknown -107 305 47 3 888 1278 113 5 15 chr13 39762959 39763156 -80521156 + B2_Mm2 SINE B2 1 195 0 3 888 271 313 30 20 chr13 39763707 39763808 -80520504 - MLT1A LTR MaLR -1 389 288 3 888 446 301 12 44 chr13 39763840 39764000 -80520312 - MLT1A LTR MaLR -219 155 1 3 888 599 301 48 52 chr13 39764011 39764263 -80520049 - MLT1A-int LTR MaLR -12 1723 1473 3 888 472 306 111 24 chr13 39764284 39764360 -80519952 - ERVL-B4-int LTR ERVL -5141 573 496 3 888 393 75 0 0 chr13 39764360 39764413 -80519899 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 3 888 472 306 111 24 chr13 39764413 39764624 -80519688 - ERVL-B4-int LTR ERVL -5219 495 261 3 888 385 287 69 112 chr13 39764914 39765157 -80519155 - MLT2B4 LTR ERVL 0 554 324 3 888 430 284 35 0 chr13 39765179 39765320 -80518992 - MLT2B4 LTR ERVL -403 153 8 3 888 234 0 0 0 chr13 39765487 39765513 -80518799 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 4 888 716 220 0 0 chr13 39765587 39765719 -80518593 - B1_Mur1 SINE Alu -7 142 11 4 888 768 139 26 7 chr13 39766563 39766715 -80517597 + CT-rich Low_complexity Low_complexity 3 157 0 4 888 189 0 0 0 chr13 39767258 39767279 -80517033 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4 888 294 325 37 25 chr13 39767947 39768108 -80516204 - MIR SINE MIR -75 187 25 4 888 399 286 37 60 chr13 39768336 39768470 -80515842 + B3A SINE B2 64 194 -4 4 888 2415 128 83 11 chr13 39770316 39770759 -80513553 + IAPLTR2_Mm LTR ERVK 1 475 0 4 888 1051 73 9 151 chr13 39770759 39770976 -80513336 + IAPEz-int LTR ERVK 9 194 -6287 4 888 234 315 0 0 chr13 39770976 39771030 -80513282 + RLTR27 LTR ERVK 222 275 -34 4 888 3662 59 2 18 chr13 39771030 39771533 -80512779 + IAPEz-int LTR ERVK 168 662 -5819 4 888 2026 79 0 0 chr13 39771533 39771811 -80512501 + IAPEz-int LTR ERVK 1359 1636 -4845 4 888 5691 45 4 19 chr13 39771810 39772565 -80511747 + IAPEz-int LTR ERVK 5736 6479 -2 4 888 2399 130 83 11 chr13 39772567 39773010 -80511302 + IAPLTR2_Mm LTR ERVK 1 475 0 4 888 684 221 62 46 chr13 39773090 39773285 -80511027 - B3A SINE B2 0 198 1 4 888 565 293 89 0 chr13 39774655 39774812 -80509500 - B3A SINE B2 -23 175 5 4 888 888 250 147 11 chr13 39775933 39776151 -80508161 + Lx9 LINE L1 7206 7426 -218 4 888 234 0 0 0 chr13 39776151 39776177 -80508135 + (TC)n Simple_repeat Simple_repeat 2 27 0 4 888 888 250 147 11 chr13 39776177 39776338 -80507974 + Lx9 LINE L1 7427 7637 -7 4 888 23 0 0 0 chr13 39776564 39776587 -80507725 + AT_rich Low_complexity Low_complexity 1 23 0 4 888 396 297 183 4 chr13 39777770 39778000 -80506312 - Lx8 LINE L1 -699 6774 6504 4 888 473 360 82 13 chr13 39778010 39778325 -80505987 + Lx8 LINE L1 6827 7163 -310 4 888 261 0 0 0 chr13 39778341 39778370 -80505942 + (A)n Simple_repeat Simple_repeat 1 29 0 4 888 8272 24 2 1 chr13 39778617 39779635 -80504677 + L1Md_T LINE L1 4568 5586 -297 4 888 8992 5 0 4 chr13 39779635 39780668 -80503644 + L1Md_T LINE L1 5587 6582 0 4 888 504 106 0 0 chr13 39780912 39780997 -80503315 + (TC)n Simple_repeat Simple_repeat 1 85 0 4 888 251 279 26 114 chr13 39781082 39781215 -80503097 - B1F2 SINE Alu -29 120 1 4 888 1176 88 0 0 chr13 39781278 39781449 -80502863 + (GAAA)n Simple_repeat Simple_repeat 2 172 0 4 888 308 292 134 101 chr13 39781597 39782019 -80502293 + MLT2B1 LTR ERVL 1 560 -7 4 888 432 0 0 0 chr13 39782224 39782272 -80502040 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 888 324 352 36 36 chr13 39782522 39782656 -80501656 + RSINE1 SINE B4 1 136 -29 4 888 279 0 0 0 chr13 39782656 39782687 -80501625 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 888 306 0 0 0 chr13 39782687 39782720 -80501592 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 888 324 352 36 36 chr13 39782720 39782749 -80501563 + RSINE1 SINE B4 137 164 -1 4 888 229 177 12 12 chr13 39782759 39782839 -80501473 + (CA)n Simple_repeat Simple_repeat 2 81 0 4 888 654 47 0 0 chr13 39782880 39782966 -80501346 + (CTA)n Simple_repeat Simple_repeat 3 88 0 4 888 341 261 50 0 chr13 39784225 39784322 -80499990 - PB1D10 SINE Alu -1 116 17 4 888 1135 29 14 0 chr13 39784640 39784780 -80499532 - B1_Mm SINE Alu 0 147 6 4 888 276 253 101 28 chr13 39784678 39784834 -80499478 - ORR1B1-int LTR MaLR -755 754 586 4 888 514 333 108 38 chr13 39784834 39785046 -80499266 + B4A SINE B4 2 228 -64 4 888 690 13 0 0 chr13 39785046 39785125 -80499187 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 888 251 239 14 29 chr13 39786111 39786180 -80498132 + (CATATA)n Simple_repeat Simple_repeat 1 68 0 4 888 3976 113 23 5 chr13 39786188 39787042 -80497270 + Lx4A LINE L1 5398 6273 -785 4 888 254 364 166 17 chr13 39787214 39787378 -80496934 - B4A SINE B4 -18 274 74 4 888 569 14 14 0 chr13 39787378 39787448 -80496864 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 888 254 364 166 17 chr13 39787448 39787518 -80496794 - B4A SINE B4 -219 73 7 4 888 285 333 103 25 chr13 39787678 39787921 -80496391 + MLT2B3 LTR ERVL 289 550 -4 4 888 315 0 0 0 chr13 39788427 39788462 -80495850 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 888 390 298 96 42 chr13 39788490 39788896 -80495416 - L1ME2z LINE L1 -552 5892 5465 4 888 33 80 0 0 chr13 39789152 39789227 -80495085 + AT_rich Low_complexity Low_complexity 1 75 0 4 888 323 267 8 49 chr13 39790122 39790244 -80494068 + CYRA11_Mm Unknown Y-chromosome 202 318 -299 4 888 732 154 262 0 chr13 39790135 39790284 -80494028 - URR1A DNA MER1_type -37 189 2 4 888 316 328 48 24 chr13 39791177 39791302 -80493010 + RSINE1 SINE B4 3 130 -35 4 888 213 39 0 0 chr13 39791317 39791343 -80492969 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 4 888 726 261 39 5 chr13 39791370 39791574 -80492738 - RCHARR1 DNA MER1_type -325 649 439 4 888 584 276 82 10 chr13 39791687 39791881 -80492431 + B3 SINE B2 2 209 -7 4 888 25 0 0 0 chr13 39793760 39793785 -80490527 + AT_rich Low_complexity Low_complexity 1 25 0 4 888 342 265 0 0 chr13 39793826 39793894 -80490418 - PB1D7 SINE Alu -10 110 43 4 888 22 35 0 0 chr13 39793907 39793936 -80490376 + AT_rich Low_complexity Low_complexity 1 29 0 4 888 180 111 0 0 chr13 39795218 39795245 -80489067 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 4 888 185 116 93 0 chr13 39795657 39795700 -80488612 - L3 LINE CR1 -4411 78 32 4 888 459 247 37 23 chr13 39796254 39796401 -80487911 - MLT1H2 LTR MaLR -2 577 358 4 888 6335 122 40 6 chr13 39797985 39799161 -80485151 - Lx LINE L1 0 6654 5446 4 888 210 71 0 0 chr13 39799361 39799389 -80484923 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 888 447 19 0 0 chr13 39800134 39800186 -80484126 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 888 944 241 67 4 chr13 39800238 39800505 -80483807 + RCHARR1 DNA MER1_type 682 965 -9 4 888 471 134 0 0 chr13 39800710 39800792 -80483520 + (A)n Simple_repeat Simple_repeat 1 82 0 4 888 812 128 6 19 chr13 39800850 39801009 -80483303 + CT-rich Low_complexity Low_complexity 2 158 0 4 888 472 318 41 29 chr13 39801249 39801563 -80482749 - L1MB8 LINE L1 -240 5938 5621 4 888 32514 40 0 6 chr13 39802060 39806936 -80477376 + L1Md_Gf LINE L1 543 5323 -563 4 13 23610 8 0 1 chr13 39842936 39846829 -80437483 - L1Md_A LINE L1 -2015 3868 1 4 889 441 0 0 0 chr13 39847736 39847785 -80436527 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 889 4303 71 17 0 chr13 39849605 39850181 -80434131 - MusHAL1 LINE L1 -1102 1610 1025 4 889 7415 75 12 9 chr13 39850181 39851173 -80433139 + L1_Mus3 LINE L1 5587 6581 -57 4 889 738 46 0 0 chr13 39851168 39851255 -80433057 + L1_Mm LINE L1 5532 5618 -265 4 889 772 267 13 106 chr13 39851702 39851816 -80432496 - ID_B1 SINE B4 -7 217 122 4 889 948 154 152 44 chr13 39851816 39852020 -80432292 - URR1A DNA MER1_type 0 226 1 4 889 772 267 13 106 chr13 39852020 39852140 -80432172 - ID_B1 SINE B4 -103 121 5 4 889 198 0 0 0 chr13 39853640 39853662 -80430650 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 4 889 185 0 0 39 chr13 39854655 39854681 -80429631 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 889 192 77 0 0 chr13 39854732 39854758 -80429554 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 889 747 105 0 0 chr13 39854944 39855077 -80429235 + (CA)n Simple_repeat Simple_repeat 2 134 0 4 889 306 148 0 0 chr13 39855081 39855135 -80429177 + (ATG)n Simple_repeat Simple_repeat 3 56 0 4 889 635 223 106 117 chr13 39856428 39856616 -80427696 - B3A SINE B2 -9 186 1 4 889 981 221 50 218 chr13 39856915 39857373 -80426939 + ORR1C2 LTR MaLR 1 381 -3 4 889 4655 38 2 8 chr13 39857475 39858003 -80426309 + L1Md_F2 LINE L1 6058 6582 0 4 889 269 261 107 14 chr13 39859346 39859486 -80424826 - L1M4b LINE L1 -3670 3664 3512 4 889 807 185 133 47 chr13 39859952 39860207 -80424105 + MTC-int LTR MaLR 982 1258 0 4 889 1678 201 43 32 chr13 39860207 39860582 -80423730 + MTC LTR MaLR 1 379 -42 4 889 593 319 137 7 chr13 39860635 39861058 -80423254 - L1M4b LINE L1 -5598 1736 1259 4 889 401 241 93 71 chr13 39861826 39861854 -80422458 - B2_Mm2 SINE B2 -7 188 149 4 889 261 0 0 0 chr13 39861854 39861883 -80422429 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 889 360 0 0 0 chr13 39861883 39861922 -80422390 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 889 572 241 93 71 chr13 39861922 39862075 -80422237 - B3A SINE B2 -44 154 2 4 889 614 284 77 0 chr13 39862461 39862644 -80421668 - MTD LTR MaLR 0 419 223 4 889 400 293 112 8 chr13 39862660 39862794 -80421518 - MTD LTR MaLR -242 177 30 4 889 268 88 35 0 chr13 39862798 39862855 -80421457 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 4 889 1212 69 0 0 chr13 39862858 39863003 -80421309 - B1_Mm SINE Alu -1 146 2 4 889 717 12 0 0 chr13 39863184 39863266 -80421046 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 4 889 1682 171 125 32 chr13 39863345 39863532 -80420780 + RMER17C LTR ERVK 1 185 -225 4 889 751 78 8 8 chr13 39863532 39863649 -80420663 + (TTCTC)n Simple_repeat Simple_repeat 5 121 0 4 889 1682 171 125 32 chr13 39863649 39863836 -80420476 + RMER17C LTR ERVK 186 410 0 4 889 546 16 0 0 chr13 39865492 39865555 -80418757 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 4 889 2771 266 119 42 chr13 39865559 39866482 -80417830 - Lx9 LINE L1 -173 7471 6450 4 889 3427 79 0 12 chr13 39866482 39866893 -80417419 - MTB_Mm LTR MaLR -1 406 1 4 889 2771 266 119 42 chr13 39866893 39867110 -80417202 - Lx9 LINE L1 -1195 6449 6243 4 889 24 53 0 0 chr13 39867110 39867148 -80417164 + AT_rich Low_complexity Low_complexity 1 38 0 4 889 719 226 20 25 chr13 39867292 39867496 -80416816 + Lx9 LINE L1 5772 5974 -1670 4 889 186 43 0 0 chr13 39868401 39868424 -80415888 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 889 22 35 0 0 chr13 39873553 39873582 -80410730 + AT_rich Low_complexity Low_complexity 1 29 0 4 889 309 286 199 13 chr13 39873741 39873897 -80410415 - MER5A DNA MER1_type -3 186 2 4 889 242 73 24 0 chr13 39874091 39874132 -80410180 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 889 210 191 0 0 chr13 39875408 39875455 -80408857 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 889 21 0 0 0 chr13 39875566 39875587 -80408725 + AT_rich Low_complexity Low_complexity 1 21 0 4 889 234 91 0 0 chr13 39875613 39875646 -80408666 + (CAAT)n Simple_repeat Simple_repeat 3 35 0 4 889 1211 121 28 17 chr13 39876072 39876248 -80408064 + B2_Mm2 SINE B2 2 179 -16 4 889 809 71 9 0 chr13 39876251 39876364 -80407948 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 5 889 651 222 67 0 chr13 39876478 39876613 -80407699 + B1_Mur2 SINE Alu 6 149 0 5 889 432 0 0 0 chr13 39877080 39877128 -80407184 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 889 252 244 0 60 chr13 39877259 39877342 -80406970 - MLT1A0 LTR MaLR -4 361 284 5 889 1481 80 0 5 chr13 39879716 39879905 -80404407 - B2_Mm2 SINE B2 -7 188 1 5 889 438 139 0 0 chr13 39879974 39880046 -80404266 + (TTTC)n Simple_repeat Simple_repeat 2 73 0 5 889 1088 52 0 0 chr13 39880047 39880182 -80404130 - B1_Mm SINE Alu 0 147 13 5 889 731 303 111 51 chr13 39880556 39881042 -80403270 - MER74A LTR ERVL 0 622 12 5 889 241 236 9 9 chr13 39881739 39881846 -80402466 + (TA)n Simple_repeat Simple_repeat 1 107 0 5 889 276 326 89 28 chr13 39882191 39882361 -80401951 + LTR16E2 LTR ERVL 333 508 -30 5 889 346 306 30 20 chr13 39882700 39882900 -80401412 - L1M5 LINE L1 -3106 3040 2839 5 889 483 317 127 69 chr13 39882932 39883264 -80401048 - ORR1E LTR MaLR -8 351 1 5 889 294 270 0 0 chr13 39883406 39883480 -80400832 - L1M5 LINE L1 -3331 2815 2742 5 889 242 213 53 0 chr13 39883742 39883817 -80400495 - L1M3 LINE L1 -3683 2457 2379 5 889 3628 30 2 0 chr13 39885007 39885402 -80398910 - MTA_Mm LTR MaLR 0 396 1 5 889 2052 223 42 8 chr13 39885881 39886283 -80398029 - MTC LTR MaLR -1 420 5 5 889 344 311 43 98 chr13 39887379 39887543 -80396769 + B4 SINE B4 70 224 -68 5 889 642 273 7 7 chr13 39887403 39887547 -80396765 + B1F2 SINE Alu 6 149 0 5 889 596 80 0 11 chr13 39887547 39887635 -80396677 + (GGAA)n Simple_repeat Simple_repeat 2 88 0 5 889 3022 136 50 31 chr13 39888064 39888728 -80395584 + L1_Mur2 LINE L1 589 1331 -5755 5 889 189 0 0 0 chr13 39889169 39889190 -80395122 + (GA)n Simple_repeat Simple_repeat 2 22 0 5 889 308 183 41 27 chr13 39890017 39890090 -80394222 - RMER4B LTR ERVK -30 555 482 5 889 1459 174 16 23 chr13 39890088 39890393 -80393919 - RMER4B LTR ERVK -282 303 1 5 889 717 311 76 12 chr13 39890412 39890858 -80393454 + L1_Mur2 LINE L1 1357 1907 -3973 5 889 466 342 77 62 chr13 39890895 39891169 -80393143 + B4A SINE B4 15 292 0 5 889 23 0 0 0 chr13 39892408 39892431 -80391881 + AT_rich Low_complexity Low_complexity 1 23 0 5 889 306 345 23 92 chr13 39893178 39893309 -80391003 + RSINE1 SINE B4 44 165 0 5 889 652 209 14 41 chr13 39893559 39893578 -80390734 + B1_Mus1 SINE Alu 8 22 -126 5 889 3195 63 2 0 chr13 39893578 39893977 -80390335 - MTB LTR MaLR 0 400 1 5 889 652 209 14 41 chr13 39893977 39894102 -80390210 + B1_Mus1 SINE Alu 23 148 0 5 889 392 186 126 98 chr13 39894177 39894320 -80389992 - B1_Mur1 SINE Alu 0 149 3 5 889 309 353 41 102 chr13 39894458 39894821 -80389491 + MER34 LTR ERV1 1 341 -201 5 889 253 64 20 41 chr13 39895222 39895271 -80389041 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 5 889 772 131 145 8 chr13 39895278 39895409 -80388903 - B1_Mur4 SINE Alu -1 149 1 5 889 389 302 45 23 chr13 39895550 39895582 -80388730 + CYRA11_Mm Unknown Y-chromosome 137 172 -445 5 889 921 131 7 0 chr13 39895582 39895727 -80388585 - URR1A DNA MER1_type 0 226 81 5 889 1538 61 0 0 chr13 39896075 39896273 -80388039 + L1_Mus1 LINE L1 6370 6567 0 5 889 1223 258 40 45 chr13 39896365 39896743 -80387569 - MTEa LTR MaLR -3 376 1 5 889 1133 89 0 14 chr13 39897097 39897245 -80387067 + B1_Mus1 SINE Alu 2 147 -1 5 889 574 345 20 5 chr13 39898212 39898239 -80386073 - B3A SINE B2 0 198 171 5 889 288 0 0 0 chr13 39898239 39898271 -80386041 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 889 574 345 20 5 chr13 39898271 39898438 -80385874 - B3A SINE B2 -28 170 2 5 889 475 271 75 8 chr13 39900021 39900155 -80384157 + RSINE1 SINE B4 11 153 -12 5 889 315 0 0 0 chr13 39900158 39900193 -80384119 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 889 2062 247 86 13 chr13 39900333 39900964 -80383348 + RCHARR1 DNA MER1_type 231 907 -67 5 889 233 218 214 22 chr13 39901554 39901643 -80382669 - MER70B LTR ERVL -369 209 104 5 889 677 246 0 0 chr13 39903707 39903837 -80380475 + B3 SINE B2 1 130 -86 5 889 4111 46 4 0 chr13 39904029 39904529 -80379783 + L1Md_F2 LINE L1 6081 6582 0 5 889 21 0 0 0 chr13 39905321 39905342 -80378970 + AT_rich Low_complexity Low_complexity 1 21 0 5 889 450 0 0 0 chr13 39905458 39905508 -80378804 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 889 558 274 16 22 chr13 39906421 39906604 -80377708 - B3A SINE B2 -16 182 1 5 889 421 324 9 0 chr13 39906676 39906781 -80377531 - B3A SINE B2 -85 113 8 5 889 357 306 124 57 chr13 39906826 39907124 -80377188 - L1MC LINE L1 -1987 4159 3842 5 889 1182 200 4 9 chr13 39907495 39907722 -80376590 + URR1A DNA MER1_type 1 226 0 5 889 228 329 136 0 chr13 39909125 39909280 -80375032 + MER2 DNA MER2_type 13 188 -157 5 889 1509 236 57 16 chr13 39909775 39910141 -80374171 - MTD LTR MaLR -14 405 25 5 889 204 280 0 0 chr13 39910271 39910321 -80373991 + GA-rich Low_complexity Low_complexity 4 53 0 5 889 969 113 0 0 chr13 39913141 39913291 -80371021 + (TG)n Simple_repeat Simple_repeat 1 150 0 5 889 247 284 0 26 chr13 39913429 39913505 -80370807 - L1MC5 LINE L1 -1142 6819 6746 5 889 24 0 0 0 chr13 39913804 39913828 -80370484 + AT_rich Low_complexity Low_complexity 1 24 0 5 889 384 316 26 0 chr13 39914164 39914278 -80370034 - B1F SINE Alu -23 126 10 5 889 1904 298 113 38 chr13 39914286 39915108 -80369204 - MER54A LTR ERVL -12 889 6 5 889 294 194 0 0 chr13 39915805 39915867 -80368445 + T-rich Low_complexity Low_complexity 1 62 0 5 889 304 301 8 0 chr13 39916227 39916350 -80367962 + L1M2 LINE L1 4620 4743 -1400 5 889 597 193 207 24 chr13 39916392 39916672 -80367640 + ORR1D1 LTR MaLR 11 370 -4 5 889 666 305 37 28 chr13 39916750 39917074 -80367238 + Lx8 LINE L1 7092 7418 -55 5 889 792 169 42 7 chr13 39920828 39920971 -80363341 + B1_Mur3 SINE Alu 2 149 0 5 889 189 139 0 0 chr13 39920985 39921028 -80363284 + (A)n Simple_repeat Simple_repeat 1 43 0 5 889 342 298 58 0 chr13 39921036 39921157 -80363155 - B1F SINE Alu -21 128 1 5 889 230 238 63 0 chr13 39921113 39921176 -80363136 - B4 SINE B4 -162 130 64 5 889 448 317 24 0 chr13 39921480 39921603 -80362709 - RSINE1 SINE B4 -19 146 21 5 889 509 237 29 29 chr13 39921748 39921887 -80362425 - B1F SINE Alu 0 149 11 5 889 393 22 0 0 chr13 39921909 39921955 -80362357 + (T)n Simple_repeat Simple_repeat 1 46 0 5 889 291 362 102 0 chr13 39925655 39925782 -80358530 - ID_B1 SINE B4 -9 215 76 5 889 439 283 65 100 chr13 39925919 39926119 -80358193 + MER20 DNA MER1_type 27 219 0 5 889 261 299 339 32 chr13 39927035 39927201 -80357111 - B4 SINE B4 -6 286 53 5 889 330 26 0 0 chr13 39927201 39927240 -80357072 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 889 261 299 339 32 chr13 39927240 39927291 -80357021 - B4 SINE B4 -240 52 2 5 889 383 0 21 0 chr13 39927845 39927892 -80356420 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 889 464 290 77 35 chr13 39927911 39928054 -80356258 - B3 SINE B2 -67 149 1 5 889 541 29 0 0 chr13 39928542 39928611 -80355701 + B1_Mur4 SINE Alu 78 146 -4 5 889 390 21 0 0 chr13 39928613 39928660 -80355652 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 889 306 108 37 47 chr13 39929848 39929955 -80354357 + T-rich Low_complexity Low_complexity 4 109 0 5 889 558 262 93 40 chr13 39932198 39932349 -80351963 - RSINE1 SINE B4 -4 161 3 5 889 1160 37 0 0 chr13 39932549 39932684 -80351628 + B1_Mus1 SINE Alu 2 136 -12 5 889 371 21 21 0 chr13 39932685 39932733 -80351579 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 5 889 468 0 0 0 chr13 39932748 39932800 -80351512 + (TA)n Simple_repeat Simple_repeat 1 52 0 5 889 478 368 52 8 chr13 39933253 39933502 -80350810 - L1MC4 LINE L1 -556 7486 7227 5 889 661 322 45 35 chr13 39933757 39934075 -80350237 + MLT1A1 LTR MaLR 44 403 -5 5 889 2094 161 39 84 chr13 39934386 39934827 -80349485 - MTC LTR MaLR 0 421 1 5 889 261 68 16 63 chr13 39936355 39936418 -80347894 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 5 889 1166 68 0 0 chr13 39936419 39936567 -80347745 - B1_Mus1 SINE Alu 0 148 1 5 889 1171 322 34 70 chr13 39936601 39937346 -80346966 + Lx8 LINE L1 6575 7292 -181 5 889 962 121 6 0 chr13 39937382 39937539 -80346773 + (GA)n Simple_repeat Simple_repeat 1 158 0 5 889 302 315 147 20 chr13 39937774 39938066 -80346246 + L1MA6 LINE L1 5929 6257 -43 5 889 362 287 43 9 chr13 39938204 39938320 -80345992 + RSINE1 SINE B4 2 121 -44 5 889 31 76 0 0 chr13 39938708 39938774 -80345538 + AT_rich Low_complexity Low_complexity 1 66 0 5 889 276 346 29 14 chr13 39939176 39939314 -80344998 + ERVL-E-int LTR ERVL 4208 4347 -1320 5 889 440 217 11 28 chr13 39939838 39940018 -80344294 + CT-rich Low_complexity Low_complexity 2 178 0 5 889 678 305 49 56 chr13 39940726 39941011 -80343301 + B4 SINE B4 2 284 -8 5 889 257 266 0 0 chr13 39941019 39941083 -80343229 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 889 26 0 0 0 chr13 39941086 39941112 -80343200 + AT_rich Low_complexity Low_complexity 1 26 0 5 889 348 24 0 0 chr13 39941323 39941364 -80342948 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 5 889 1276 62 0 0 chr13 39941364 39941525 -80342787 - B2_Mm2 SINE B2 -34 161 1 5 889 1301 197 14 11 chr13 39943267 39943544 -80340768 + Lx5 LINE L1 6761 7038 -12 5 889 514 306 12 19 chr13 39943740 39943900 -80340412 + RSINE1 SINE B4 3 161 -4 5 889 279 0 0 0 chr13 39943949 39943980 -80340332 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 889 1237 41 0 0 chr13 39944122 39944267 -80340045 - B1_Mus2 SINE Alu -2 145 1 6 889 1668 85 37 0 chr13 39944283 39944529 -80339783 - Lx3_Mus LINE L1 0 7009 6755 6 889 679 344 104 31 chr13 39944649 39944976 -80339336 - Tigger7 DNA MER2_type -2135 356 6 6 889 207 0 0 0 chr13 39945138 39945161 -80339151 + (GA)n Simple_repeat Simple_repeat 1 23 0 6 889 3258 43 0 0 chr13 39945185 39945578 -80338734 - L1Md_T LINE L1 0 6582 6190 6 889 491 316 7 0 chr13 39946088 39946224 -80338088 - B1F2 SINE Alu 0 149 13 6 889 687 278 22 27 chr13 39946298 39946483 -80337829 - B3 SINE B2 -3 213 30 6 889 261 0 0 0 chr13 39946791 39946820 -80337492 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 889 289 276 87 15 chr13 39946821 39946926 -80337386 - B3 SINE B2 -36 180 67 6 889 284 127 18 0 chr13 39946926 39946981 -80337331 + (TTGGGG)n Simple_repeat Simple_repeat 6 61 0 6 889 284 313 36 30 chr13 39947006 39947173 -80337139 - MIRc SINE MIR -42 226 52 6 889 21 0 0 0 chr13 39947728 39947749 -80336563 + AT_rich Low_complexity Low_complexity 1 21 0 6 889 22 0 0 0 chr13 39948653 39948675 -80335637 + AT_rich Low_complexity Low_complexity 1 22 0 6 889 489 325 0 0 chr13 39948805 39948925 -80335387 + B1F2 SINE Alu 3 122 -27 6 889 879 105 19 0 chr13 39948942 39949151 -80335161 + (TAGA)n Simple_repeat Simple_repeat 1 212 0 6 889 1297 103 11 5 chr13 39949167 39949353 -80334959 + B2_Mm2 SINE B2 4 190 -5 6 889 182 62 31 0 chr13 39949355 39949387 -80334925 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 6 889 242 315 77 77 chr13 39950764 39950881 -80333431 + MER45R DNA Tip100 315 431 -1150 6 889 907 197 103 10 chr13 39951909 39952104 -80332208 + B3 SINE B2 4 216 0 6 889 1392 146 74 4 chr13 39952863 39953132 -80331180 - Lx2A1 LINE L1 -1 7007 6720 6 889 278 210 59 10 chr13 39953179 39953280 -80331032 + Lx3C LINE L1 6869 6974 -2 6 889 236 170 19 19 chr13 39953770 39953824 -80330488 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 889 282 56 0 0 chr13 39954174 39954210 -80330102 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 6 889 573 250 12 48 chr13 39954228 39954396 -80329916 - U1 snRNA snRNA -3 162 1 6 889 237 65 0 0 chr13 39955089 39955120 -80329192 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 889 189 258 0 0 chr13 39955673 39955739 -80328573 + GA-rich Low_complexity Low_complexity 5 70 0 6 889 984 108 124 18 chr13 39955808 39955977 -80328335 - B2_Mm2 SINE B2 -5 190 4 6 889 559 292 59 59 chr13 39956052 39956576 -80327736 - L1MB4 LINE L1 -341 5839 5316 6 889 235 270 27 13 chr13 39957155 39957230 -80327082 + MIRc SINE MIR 193 268 0 6 889 3690 168 76 103 chr13 39959284 39960195 -80324117 - RMER19B LTR ERVK -16 886 1 6 889 285 281 74 8 chr13 39960222 39960344 -80323968 - Lx8 LINE L1 -96 7377 7248 6 889 1089 305 20 61 chr13 39962635 39962981 -80321331 - MTE2a LTR MaLR 0 379 48 6 889 351 0 0 0 chr13 39963794 39963833 -80320479 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 889 729 247 86 21 chr13 39963999 39964185 -80320127 + B3 SINE B2 15 212 -4 6 889 26 0 0 0 chr13 39964232 39964258 -80320054 + AT_rich Low_complexity Low_complexity 1 26 0 6 889 1538 95 0 9 chr13 39964280 39964503 -80319809 - L1_Mus2 LINE L1 0 6566 6346 6 889 656 283 19 82 chr13 39964669 39964708 -80319604 - B3A SINE B2 -3 195 165 6 889 234 91 0 0 chr13 39964708 39964741 -80319571 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 889 656 283 19 82 chr13 39964741 39964909 -80319403 - B3A SINE B2 -34 164 1 6 889 46 45 0 0 chr13 39964911 39964978 -80319334 + AT_rich Low_complexity Low_complexity 1 67 0 6 889 702 0 0 0 chr13 39965168 39965246 -80319066 + (TTCC)n Simple_repeat Simple_repeat 4 81 0 6 889 599 297 23 20 chr13 39965478 39965648 -80318664 + MTE2a LTR MaLR 217 399 -20 6 889 769 271 49 10 chr13 39966114 39966319 -80317993 - ID_B1 SINE B4 -9 215 3 6 889 1403 192 55 50 chr13 39967667 39968157 -80316155 + RLTR31A_Mm LTR ERVK 6 557 0 6 889 425 266 134 61 chr13 39968206 39968370 -80315942 + B3 SINE B2 4 179 -37 6 889 471 128 0 0 chr13 39968752 39968838 -80315474 + (TG)n Simple_repeat Simple_repeat 1 86 0 6 889 219 100 67 0 chr13 39968841 39968901 -80315411 + (CAGAGA)n Simple_repeat Simple_repeat 3 66 0 6 889 514 335 33 55 chr13 39968943 39969215 -80315097 - B4A SINE B4 0 292 27 6 889 2473 249 36 87 chr13 39969241 39970068 -80314244 - Lx6 LINE L1 -9 7451 6667 6 889 23 0 0 0 chr13 39971585 39971608 -80312704 + AT_rich Low_complexity Low_complexity 1 23 0 6 889 305 105 22 65 chr13 39971869 39971961 -80312351 + (TCTCTG)n Simple_repeat Simple_repeat 3 90 0 6 889 25 0 0 0 chr13 39971961 39971986 -80312326 + AT_rich Low_complexity Low_complexity 1 25 0 6 889 288 70 0 0 chr13 39973117 39973160 -80311152 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 6 889 22 0 0 0 chr13 39973757 39973779 -80310533 + AT_rich Low_complexity Low_complexity 1 22 0 6 889 546 119 0 0 chr13 39974112 39974196 -80310116 + (TCTA)n Simple_repeat Simple_repeat 1 84 0 6 889 291 85 0 0 chr13 39975424 39975471 -80308841 + (CAA)n Simple_repeat Simple_repeat 1 47 0 6 889 241 0 0 93 chr13 39976398 39976441 -80307871 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 6 889 338 0 24 0 chr13 39976466 39976508 -80307804 + (TTG)n Simple_repeat Simple_repeat 3 45 0 6 890 268 256 63 13 chr13 39977004 39977083 -80307229 - PB1 SINE Alu -44 83 1 6 890 59 53 0 0 chr13 39977154 39977248 -80307064 + AT_rich Low_complexity Low_complexity 1 94 0 6 890 606 267 7 7 chr13 39977908 39978055 -80306257 - B1_Mur3 SINE Alu 0 149 3 6 890 355 239 44 9 chr13 39978169 39978283 -80306029 + Lx9 LINE L1 7519 7636 -8 6 890 24 53 0 0 chr13 39978415 39978453 -80305859 + AT_rich Low_complexity Low_complexity 1 38 0 6 890 559 252 62 43 chr13 39978465 39978722 -80305590 + L1MB5 LINE L1 4499 4760 -1386 6 890 756 116 25 29 chr13 39978742 39979198 -80305114 + (TG)n Simple_repeat Simple_repeat 1 453 0 6 890 528 266 109 49 chr13 39979226 39979530 -80304782 + L1MB5 LINE L1 4804 5125 -1021 6 890 530 300 198 25 chr13 39979786 39980257 -80304055 + L1MB5 LINE L1 5332 5883 -301 6 890 459 123 0 0 chr13 39980854 39980935 -80303377 + (TG)n Simple_repeat Simple_repeat 2 82 0 6 890 3083 57 25 15 chr13 39981856 39982252 -80302060 - MTB LTR MaLR 0 400 1 6 890 324 64 0 0 chr13 39983173 39983220 -80301092 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 6 890 939 35 0 0 chr13 39983677 39983791 -80300521 - B1_Mus1 SINE Alu -4 144 31 6 890 222 37 0 0 chr13 39984236 39984263 -80300049 + (TC)n Simple_repeat Simple_repeat 2 28 0 6 890 501 47 0 0 chr13 39984776 39984840 -80299472 + (GGA)n Simple_repeat Simple_repeat 2 65 0 6 890 204 122 0 0 chr13 39984846 39984887 -80299425 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 890 639 282 128 35 chr13 39985519 39986096 -80298216 - L1M2 LINE L1 -1333 4810 4180 6 890 247 270 67 13 chr13 39986374 39986449 -80297863 - PB1D10 SINE Alu -16 104 26 6 890 266 383 70 0 chr13 39987223 39987338 -80296974 - PB1 SINE Alu -2 125 3 6 890 1181 247 84 29 chr13 39988105 39988485 -80295827 - Lx6 LINE L1 -4 7456 7056 6 890 322 38 0 37 chr13 39988486 39988540 -80295772 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 6 890 60 59 0 0 chr13 39988658 39988760 -80295552 + AT_rich Low_complexity Low_complexity 1 102 0 6 890 22 0 0 0 chr13 39988971 39988993 -80295319 + AT_rich Low_complexity Low_complexity 1 22 0 6 890 978 226 39 0 chr13 39989032 39989240 -80295072 - B3 SINE B2 0 216 1 6 890 1813 129 38 55 chr13 39990697 39991114 -80293198 + RMER17C LTR ERVK 1 410 0 6 890 23 0 0 0 chr13 39991354 39991377 -80292935 + AT_rich Low_complexity Low_complexity 1 23 0 6 890 237 226 38 0 chr13 39991476 39991529 -80292783 - Lx8 LINE L1 -786 6687 6633 6 890 623 199 71 26 chr13 39991664 39991819 -80292493 + Lx6 LINE L1 6956 7117 -343 6 890 335 236 19 0 chr13 39991842 39991948 -80292364 - Lx6 LINE L1 -170 7290 7183 6 890 532 185 82 25 chr13 39992316 39992438 -80291874 + B1_Mur3 SINE Alu 17 145 -4 6 890 422 341 78 0 chr13 39995461 39995666 -80288646 - Tigger7 DNA MER2_type -7 2484 2264 6 890 333 100 0 0 chr13 39996906 39996956 -80287356 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 6 890 297 0 0 0 chr13 39997582 39997615 -80286697 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 890 260 324 72 0 chr13 39997718 39997829 -80286483 - Tigger5 DNA MER2_type -2174 232 114 6 890 437 298 65 40 chr13 39997847 39998141 -80286171 + ORR1E LTR MaLR 56 378 -1 6 890 294 29 0 0 chr13 39998147 39998182 -80286130 + (CAA)n Simple_repeat Simple_repeat 3 37 0 6 890 253 385 10 0 chr13 39998184 39998288 -80286024 - Tigger5 DNA MER2_type -2301 105 1 6 890 262 297 143 23 chr13 40000342 40000607 -80283705 + L1MA4 LINE L1 5790 6086 -214 1 890 338 0 24 0 chr13 40000954 40000996 -80283316 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 890 255 339 12 103 chr13 40001877 40002120 -80282192 - Lx8 LINE L1 -11 7462 7242 3 890 394 309 27 9 chr13 40002140 40002251 -80282061 + RSINE1 SINE B4 2 114 -51 4 890 414 0 0 0 chr13 40002267 40002313 -80281999 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 890 330 337 18 12 chr13 40002458 40002623 -80281689 - Lx8 LINE L1 -349 7124 6959 3 890 338 255 18 45 chr13 40002870 40002981 -80281331 + PB1D9 SINE Alu 6 113 -7 6 890 221 211 17 34 chr13 40004221 40004280 -80280032 + GA-rich Low_complexity Low_complexity 1 58 0 7 890 432 0 0 0 chr13 40004372 40004420 -80279892 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 890 181 348 33 11 chr13 40004753 40004843 -80279469 + L2 LINE L2 2303 2394 -1025 9 890 285 281 0 0 chr13 40005217 40005281 -80279031 - ID4_ SINE ID -6 77 14 1 890 369 261 121 43 chr13 40005300 40005440 -80278872 - ID_B1 SINE B4 -2 222 72 1 890 978 320 35 73 chr13 40006394 40007041 -80277271 + Lx8 LINE L1 6792 7414 -59 1 890 288 349 66 57 chr13 40007092 40007442 -80276870 - MER20B DNA MER1_type -141 642 290 1 890 515 302 55 14 chr13 40007470 40007688 -80276624 + Lx8 LINE L1 7161 7387 -86 1 890 803 230 89 105 chr13 40008172 40008429 -80275883 + B4 SINE B4 40 292 0 1 890 513 0 0 0 chr13 40008482 40008539 -80275773 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 890 653 319 69 28 chr13 40008623 40009208 -80275104 - L1MA5 LINE L1 -291 6009 5403 1 890 279 0 0 0 chr13 40010083 40010114 -80274198 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 890 234 0 0 0 chr13 40010114 40010139 -80274173 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 890 22 0 0 0 chr13 40010139 40010161 -80274151 + AT_rich Low_complexity Low_complexity 1 22 0 2 890 730 235 38 29 chr13 40012439 40012649 -80271663 - B3 SINE B2 -4 212 1 2 890 563 292 35 61 chr13 40012663 40012860 -80271452 - B3A SINE B2 -6 192 1 2 890 222 136 0 0 chr13 40013065 40013109 -80271203 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 890 290 360 107 22 chr13 40013776 40014037 -80270275 - MLT1A LTR MaLR -18 356 63 2 890 387 345 18 0 chr13 40014294 40014407 -80269905 - MER5A DNA MER1_type -39 150 36 2 890 924 294 74 43 chr13 40014924 40015325 -80268987 + MTE2a LTR MaLR 8 405 -14 2 890 310 305 24 24 chr13 40015486 40015570 -80268742 - BC1_Mm scRNA scRNA -68 84 1 2 890 7314 62 1 4 chr13 40016356 40017323 -80266989 - L1Md_F2 LINE L1 -12 6570 5607 2 890 22 0 0 0 chr13 40017330 40017352 -80266960 + AT_rich Low_complexity Low_complexity 1 22 0 2 890 265 324 115 30 chr13 40018900 40019170 -80265142 - MER33 DNA MER1_type 0 324 32 3 890 342 0 0 0 chr13 40019306 40019344 -80264968 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 890 198 0 0 0 chr13 40019607 40019629 -80264683 + (TC)n Simple_repeat Simple_repeat 2 23 0 3 890 188 257 83 28 chr13 40019636 40019708 -80264604 + MIR SINE MIR 177 252 -10 3 890 296 302 102 35 chr13 40019772 40019880 -80264432 - B3A SINE B2 -24 174 71 3 890 228 35 0 0 chr13 40020523 40020552 -80263760 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 890 862 150 36 0 chr13 40023034 40023174 -80261138 - B1_Mur4 SINE Alu 0 150 6 3 890 354 328 86 41 chr13 40023257 40023454 -80260858 - Tigger5 DNA MER2_type -2200 206 1 3 890 222 37 0 0 chr13 40025303 40025330 -80258982 + (ATTG)n Simple_repeat Simple_repeat 4 30 0 3 890 315 0 0 0 chr13 40025486 40025521 -80258791 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 890 1110 56 0 0 chr13 40025521 40025662 -80258650 + (GGGAGA)n Simple_repeat Simple_repeat 3 144 0 4 890 272 83 21 0 chr13 40025683 40025731 -80258581 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 890 3847 82 22 18 chr13 40025833 40026376 -80257936 + L1_Mus1 LINE L1 6023 6567 0 4 890 1877 204 48 36 chr13 40026578 40026994 -80257318 - RLTR41 LTR ERV1 0 446 26 4 890 255 103 0 0 chr13 40026994 40027033 -80257279 + (T)n Simple_repeat Simple_repeat 1 39 0 4 890 310 425 4 4 chr13 40027033 40027260 -80257052 - RMER15 LTR ERVL -109 466 240 4 890 420 289 57 23 chr13 40028783 40028960 -80255352 - MER2 DNA MER2_type -162 183 1 4 890 350 214 29 0 chr13 40029194 40029264 -80255048 + RSINE1 SINE B4 4 75 -90 4 890 830 267 19 0 chr13 40029534 40029744 -80254568 - B3 SINE B2 -1 215 2 4 890 262 291 102 8 chr13 40030205 40030333 -80253979 - MIR SINE MIR -43 219 80 4 890 436 122 24 0 chr13 40030513 40030595 -80253717 + (GAA)n Simple_repeat Simple_repeat 2 85 0 5 890 328 262 152 15 chr13 40030738 40030870 -80253442 - Lx7 LINE L1 -388 7308 7159 5 890 378 107 0 0 chr13 40031273 40031329 -80252983 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 890 319 299 87 19 chr13 40031390 40031598 -80252714 + Lx8 LINE L1 7252 7473 0 5 890 716 313 44 38 chr13 40032198 40032699 -80251613 - L1_Mur3 LINE L1 -1695 4185 3682 5 890 5328 155 84 52 chr13 40033289 40034356 -80249956 + RLTR25A LTR ERVK 1 1101 -2 5 890 244 415 57 6 chr13 40034359 40034536 -80249776 - MLT2F LTR ERVL -418 245 60 5 890 33639 35 1 0 chr13 40034952 40040622 -80243690 + L1Md_T LINE L1 1 5589 -297 5 890 8886 9 0 4 chr13 40040622 40041622 -80242690 + L1Md_T LINE L1 5590 6585 0 5 890 243 0 0 0 chr13 40041625 40041652 -80242660 + (A)n Simple_repeat Simple_repeat 1 27 0 5 890 384 22 0 0 chr13 40041704 40041749 -80242563 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 890 28 48 0 0 chr13 40042060 40042102 -80242210 + AT_rich Low_complexity Low_complexity 1 42 0 6 890 283 239 0 53 chr13 40043124 40043199 -80241113 + (CATATA)n Simple_repeat Simple_repeat 1 71 0 6 890 315 309 117 43 chr13 40043851 40044081 -80240231 + L1M5 LINE L1 4940 5186 -960 6 890 313 216 135 11 chr13 40044196 40044285 -80240027 - B1_Mur2 SINE Alu -9 140 41 6 890 1183 54 0 20 chr13 40044308 40044319 -80239993 - B1_Mus2 SINE Alu 0 147 139 6 890 243 0 0 0 chr13 40044319 40044346 -80239966 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 890 1183 54 0 20 chr13 40044346 40044484 -80239828 - B1_Mus2 SINE Alu -9 138 1 6 890 3869 77 0 17 chr13 40044531 40045088 -80239224 + L1Md_F2 LINE L1 6057 6582 0 6 890 227 300 36 48 chr13 40045143 40045227 -80239085 + B1F2 SINE Alu 1 83 -66 6 890 661 282 148 0 chr13 40046373 40046575 -80237737 - MIR SINE MIR 0 262 31 6 890 299 225 118 59 chr13 40046657 40046888 -80237424 - L1MA6 LINE L1 -6 6297 6039 6 890 437 299 155 8 chr13 40047653 40047845 -80236467 - B3A SINE B2 0 216 6 7 890 780 192 4 0 chr13 40048909 40049158 -80235154 + (TG)n Simple_repeat Simple_repeat 1 250 0 7 890 320 314 23 0 chr13 40049573 40049659 -80234653 - B4A SINE B4 -204 88 1 7 890 273 75 0 0 chr13 40049688 40049728 -80234584 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 890 213 331 49 42 chr13 40053053 40053195 -80231117 + MIR SINE MIR 116 258 -4 7 890 189 0 0 0 chr13 40053552 40053573 -80230739 + (CCA)n Simple_repeat Simple_repeat 3 23 0 7 890 205 109 0 42 chr13 40054665 40054683 -80229629 + (TTA)n Simple_repeat Simple_repeat 3 19 0 7 890 207 0 0 0 chr13 40054683 40054706 -80229606 + (TAG)n Simple_repeat Simple_repeat 1 23 0 7 890 205 109 0 42 chr13 40054706 40054735 -80229577 + (TTA)n Simple_repeat Simple_repeat 2 29 0 7 890 221 197 0 50 chr13 40055094 40055174 -80229138 + A-rich Low_complexity Low_complexity 3 78 0 7 890 770 0 11 0 chr13 40055801 40055891 -80228421 + (TG)n Simple_repeat Simple_repeat 2 92 0 8 890 22 70 0 0 chr13 40055947 40055990 -80228322 + AT_rich Low_complexity Low_complexity 1 43 0 8 890 3871 63 14 6 chr13 40057236 40057743 -80226569 + L1Md_F2 LINE L1 6071 6581 -1 8 890 6271 127 72 11 chr13 40058478 40059527 -80224785 + RLTR13D3 LTR ERVK 1 1114 0 8 890 3199 40 45 0 chr13 40059758 40060137 -80224175 - MTA_Mm LTR MaLR 0 396 1 8 890 1352 193 41 119 chr13 40060137 40060531 -80223781 - ORR1D1 LTR MaLR -8 366 4 8 890 375 81 0 16 chr13 40061002 40061065 -80223247 - L1Md_F2 LINE L1 -23 6559 6498 8 890 1398 248 46 45 chr13 40061468 40061622 -80222690 + MTD LTR MaLR 1 205 -214 8 890 1104 92 0 0 chr13 40061622 40061763 -80222549 + B1_Mm SINE Alu 1 141 -6 8 890 465 19 0 0 chr13 40061765 40061819 -80222493 + (GAAAA)n Simple_repeat Simple_repeat 4 57 0 8 890 288 0 0 0 chr13 40061819 40061850 -80222462 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 9 890 1398 233 19 29 chr13 40061850 40062059 -80222253 + MTD LTR MaLR 161 414 -5 8 890 259 312 39 0 chr13 40062365 40062442 -80221870 - BC1_Mm scRNA scRNA -63 89 10 9 890 22 0 0 0 chr13 40062493 40062515 -80221797 + AT_rich Low_complexity Low_complexity 1 22 0 9 890 273 230 21 65 chr13 40062515 40062608 -80221704 - Lx8 LINE L1 -5 7468 7380 9 890 332 311 37 37 chr13 40062618 40062725 -80221587 - PB1 SINE Alu -3 124 18 9 890 285 109 0 0 chr13 40063465 40063511 -80220801 + (CA)n Simple_repeat Simple_repeat 1 46 0 9 890 498 17 0 0 chr13 40064848 40064907 -80219405 + (CA)n Simple_repeat Simple_repeat 2 60 0 9 890 1457 202 44 101 chr13 40065269 40065676 -80218636 - ORR1C2 LTR MaLR 0 384 1 9 890 228 191 0 0 chr13 40065853 40065895 -80218417 - MLT1A1 LTR MaLR -20 388 347 9 890 184 342 38 0 chr13 40066819 40066898 -80217414 - MIR3 SINE MIR -34 174 93 9 890 220 186 0 44 chr13 40068770 40068815 -80215497 + A-rich Low_complexity Low_complexity 4 46 0 1 890 252 346 26 0 chr13 40069040 40069118 -80215194 - ID2 SINE ID -2 81 2 1 890 428 276 32 8 chr13 40069144 40069268 -80215044 - B1F SINE Alu -20 129 3 1 890 305 318 52 44 chr13 40069334 40069469 -80214843 + Charlie4a DNA MER1_type 356 491 -17 1 890 1105 139 115 29 chr13 40070142 40070350 -80213962 + URR1A DNA MER1_type 1 226 0 1 890 277 200 53 13 chr13 40070416 40070492 -80213820 + GA-rich Low_complexity Low_complexity 2 80 0 1 890 23 33 0 0 chr13 40070828 40070858 -80213454 + AT_rich Low_complexity Low_complexity 1 30 0 1 890 396 0 0 0 chr13 40071284 40071328 -80212984 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 890 447 343 12 18 chr13 40072286 40072455 -80211857 + B4 SINE B4 1 168 -124 1 890 214 260 0 20 chr13 40072565 40072616 -80211696 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 890 927 51 0 0 chr13 40072706 40072823 -80211489 + B1_Mus1 SINE Alu 2 118 -30 1 890 340 19 38 19 chr13 40072823 40072876 -80211436 + (CAAAA)n Simple_repeat Simple_repeat 5 58 0 1 890 875 107 64 0 chr13 40072876 40072898 -80211414 + B1_Mur4 SINE Alu 121 149 -1 1 890 462 88 0 0 chr13 40073067 40073135 -80211177 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 890 187 229 39 59 chr13 40073866 40073917 -80210395 + MER5A DNA MER1_type 23 72 -117 1 890 602 288 58 0 chr13 40075707 40075912 -80208400 - Lx8 LINE L1 -201 7272 7056 1 890 248 387 170 18 chr13 40076666 40076689 -80207623 - ID_B1 SINE B4 -24 200 155 1 890 284 329 13 0 chr13 40076689 40076765 -80207547 - PB1D10 SINE Alu -19 98 22 1 890 248 387 170 18 chr13 40076765 40076837 -80207475 - ID_B1 SINE B4 -24 154 4 1 890 316 325 0 65 chr13 40076950 40077042 -80207270 + 5S rRNA rRNA 3 88 -33 1 890 444 37 0 0 chr13 40077133 40077187 -80207125 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 890 430 269 52 9 chr13 40077482 40077598 -80206714 - B1F SINE Alu -5 144 24 1 890 224 261 0 0 chr13 40077561 40077607 -80206705 - B4A SINE B4 -147 145 100 1 890 432 316 45 68 chr13 40079353 40079574 -80204738 + ORR1E LTR MaLR 10 225 -134 1 890 230 286 90 54 chr13 40079895 40080006 -80204306 + B1F SINE Alu 3 117 -32 1 890 267 379 62 46 chr13 40081016 40081276 -80203036 - B4A SINE B4 -1 291 28 1 890 207 0 0 0 chr13 40081346 40081369 -80202943 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1 890 697 221 0 0 chr13 40081447 40081569 -80202743 - Lx5 LINE L1 -755 6295 6174 1 890 368 302 22 1 chr13 40081900 40082001 -80202311 + B1F SINE Alu 1 102 -18 1 890 231 282 81 23 chr13 40083227 40083314 -80200998 - L2 LINE L2 -1337 2082 1991 1 890 192 208 0 0 chr13 40083337 40083353 -80200959 + A-rich Low_complexity Low_complexity 1 16 0 1 890 441 345 80 4 chr13 40083353 40083615 -80200697 + B4A SINE B4 5 286 -6 1 890 192 208 0 0 chr13 40083615 40083651 -80200661 + A-rich Low_complexity Low_complexity 17 52 0 1 890 224 204 23 0 chr13 40083758 40083802 -80200510 - MIR SINE MIR -113 95 51 1 890 21 0 0 0 chr13 40084259 40084280 -80200032 + GC_rich Low_complexity Low_complexity 1 21 0 1 890 201 154 0 0 chr13 40085708 40085747 -80198565 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 1 890 395 119 15 0 chr13 40086066 40086133 -80198179 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 890 225 0 0 0 chr13 40086259 40086284 -80198028 + (TA)n Simple_repeat Simple_repeat 1 25 0 1 890 1141 63 0 0 chr13 40086354 40086497 -80197815 + B1_Mus1 SINE Alu 2 144 -4 1 890 864 77 0 0 chr13 40086508 40086625 -80197687 + (GAGAA)n Simple_repeat Simple_repeat 4 120 0 1 890 4487 41 2 0 chr13 40086891 40087714 -80196598 + L1Md_F2 LINE L1 5329 6153 -429 1 890 465 71 0 0 chr13 40087853 40087923 -80196389 + (GA)n Simple_repeat Simple_repeat 1 70 0 1 890 362 259 77 8 chr13 40090188 40090305 -80194007 + B1F1 SINE Alu 2 126 -22 1 890 1184 259 81 64 chr13 40090497 40090905 -80193407 - MTD LTR MaLR -1 418 4 1 890 1656 231 16 25 chr13 40090909 40091277 -80193035 + RMER15 LTR ERVL 211 575 0 1 890 538 321 40 16 chr13 40091382 40091632 -80192680 + Lx7 LINE L1 5615 5870 -1826 1 890 345 140 0 0 chr13 40091690 40091747 -80192565 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 890 376 277 109 41 chr13 40092538 40092685 -80191627 + MLT1I LTR MaLR 225 381 -30 1 890 324 347 69 14 chr13 40092708 40092924 -80191388 - L2 LINE L2 -850 2569 2342 1 890 256 246 13 40 chr13 40092934 40093010 -80191302 - MLT1A1 LTR MaLR 0 408 335 1 890 535 379 83 28 chr13 40093185 40093617 -80190695 - L2 LINE L2 -1892 1527 1072 1 890 392 144 55 24 chr13 40093745 40094210 -80190102 + (TCTA)n Simple_repeat Simple_repeat 1 479 0 1 890 257 322 39 47 chr13 40097450 40097583 -80186729 - L2a LINE L2 -71 3355 3174 1 890 207 0 0 0 chr13 40098386 40098409 -80185903 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 890 547 289 120 7 chr13 40099777 40099927 -80184385 + B3A SINE B2 2 168 -30 1 890 405 86 0 0 chr13 40099930 40099988 -80184324 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 890 573 15 0 0 chr13 40100829 40100895 -80183417 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 1 890 860 166 0 76 chr13 40100911 40101068 -80183244 - B1_Mus1 SINE Alu -2 146 2 1 890 393 328 8 25 chr13 40101175 40101294 -80183018 + B4A SINE B4 100 216 -76 1 890 266 0 0 29 chr13 40101945 40101980 -80182332 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 890 211 209 47 0 chr13 40106565 40106608 -80177704 - MIRc SINE MIR -104 164 120 1 890 966 26 0 0 chr13 40107141 40107258 -80177054 + (CTGGGG)n Simple_repeat Simple_repeat 1 117 0 1 890 372 178 0 0 chr13 40107857 40107930 -80176382 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 891 714 186 4 37 chr13 40108218 40108464 -80175848 + GA-rich Low_complexity Low_complexity 1 237 0 1 891 348 338 32 7 chr13 40109090 40109245 -80175067 - MIRc SINE MIR -41 227 69 1 891 24 0 0 0 chr13 40110591 40110615 -80173697 + AT_rich Low_complexity Low_complexity 1 24 0 1 891 25 0 0 0 chr13 40111501 40111526 -80172786 + AT_rich Low_complexity Low_complexity 1 25 0 1 891 198 71 0 0 chr13 40111638 40111666 -80172646 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 891 258 267 76 84 chr13 40112284 40112509 -80171803 + L1MA6 LINE L1 5761 5983 -317 1 891 401 66 16 0 chr13 40112681 40112742 -80171570 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 891 213 39 0 0 chr13 40113180 40113206 -80171106 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1 891 222 118 0 0 chr13 40114343 40114377 -80169935 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 891 22 0 0 0 chr13 40114586 40114608 -80169704 + AT_rich Low_complexity Low_complexity 1 22 0 1 891 467 101 13 0 chr13 40114624 40114703 -80169609 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 891 225 265 143 12 chr13 40114736 40114820 -80169492 - MIR SINE MIR -101 161 67 1 891 579 29 0 0 chr13 40115349 40115418 -80168894 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 891 432 196 2 26 chr13 40118420 40118540 -80165772 - MLT1A1 LTR MaLR -16 392 269 1 891 324 206 43 62 chr13 40120477 40120581 -80163731 + PB1 SINE Alu 33 120 0 1 891 212 261 178 25 chr13 40120682 40120839 -80163473 + L2a LINE L2 2988 3168 -258 1 891 334 200 161 23 chr13 40121524 40121560 -80162752 - B3 SINE B2 0 216 183 1 891 792 122 0 0 chr13 40121560 40121683 -80162629 + (TATG)n Simple_repeat Simple_repeat 4 126 0 1 891 334 200 161 23 chr13 40121683 40121733 -80162579 - B3 SINE B2 -34 182 119 1 891 227 112 24 90 chr13 40121733 40121900 -80162412 + (TA)n Simple_repeat Simple_repeat 2 157 0 1 891 1227 275 112 30 chr13 40122259 40123027 -80161285 - L1M2 LINE L1 -1134 5009 4179 1 891 223 28 56 0 chr13 40123348 40123384 -80160928 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 1 891 279 281 37 31 chr13 40123518 40123709 -80160603 + L1MEf LINE L1 846 1037 -5163 1 891 430 227 230 67 chr13 40124539 40124704 -80159608 - B3A SINE B2 -3 195 4 1 891 795 264 16 21 chr13 40125197 40125387 -80158925 + B3 SINE B2 1 189 -27 1 891 225 0 0 0 chr13 40125960 40125985 -80158327 + (ATTG)n Simple_repeat Simple_repeat 3 27 0 1 891 273 146 0 0 chr13 40127683 40127731 -80156581 + (A)n Simple_repeat Simple_repeat 1 48 0 1 891 338 262 114 8 chr13 40128975 40129098 -80155214 + B1F1 SINE Alu 6 141 -8 1 891 180 111 0 0 chr13 40129168 40129195 -80155117 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 1 891 2086 89 53 9 chr13 40129354 40129673 -80154639 - L1Md_F2 LINE L1 -3 6579 6247 1 891 507 288 19 95 chr13 40130706 40130917 -80153395 + B3A SINE B2 2 196 -2 1 891 410 336 0 25 chr13 40131764 40131886 -80152426 + PB1D7 SINE Alu 1 119 -1 1 891 24 85 0 0 chr13 40132119 40132178 -80152134 + AT_rich Low_complexity Low_complexity 1 59 0 1 891 243 0 0 0 chr13 40133320 40133347 -80150965 + (A)n Simple_repeat Simple_repeat 1 27 0 1 891 501 291 16 70 chr13 40133821 40134065 -80150247 - Lx8 LINE L1 0 7473 7243 1 891 461 335 147 13 chr13 40135119 40135494 -80148818 - L1MEf LINE L1 -5229 971 547 1 891 453 224 20 7 chr13 40135731 40135800 -80148512 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 1 891 3291 48 5 0 chr13 40135800 40136194 -80148118 + MTA_Mm LTR MaLR 1 396 0 1 891 453 224 20 7 chr13 40136194 40136277 -80148035 + (CATATA)n Simple_repeat Simple_repeat 6 91 0 1 891 965 362 77 38 chr13 40136406 40137044 -80147268 - MLT1E1A LTR MaLR -6 674 12 1 891 306 249 130 2 chr13 40137068 40137227 -80147085 - L1MB8 LINE L1 -289 5890 5714 2 891 387 380 80 29 chr13 40137666 40137978 -80146334 + ORR1E LTR MaLR 30 357 -2 2 891 306 123 0 0 chr13 40139703 40139760 -80144552 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 891 566 246 0 71 chr13 40139760 40139887 -80144425 - RSINE1 SINE B4 -46 119 2 2 891 2467 71 65 0 chr13 40139922 40140247 -80144065 + ORR1A1 LTR MaLR 1 346 0 2 891 13644 63 7 2 chr13 40140247 40142030 -80142282 + ORR1A1-int LTR MaLR 1 1792 0 2 891 2511 62 65 0 chr13 40142030 40142355 -80141957 + ORR1A1 LTR MaLR 1 346 0 2 891 301 200 124 21 chr13 40142733 40142830 -80141482 + L1MCa LINE L1 1112 1218 -5290 2 891 397 285 42 0 chr13 40143720 40143826 -80140486 + PB1D10 SINE Alu 1 112 -5 2 891 278 182 15 0 chr13 40143834 40143900 -80140412 + GA-rich Low_complexity Low_complexity 2 68 0 2 891 38945 10 0 6 chr13 40145184 40151418 -80132894 - L1Md_A LINE L1 -2 6580 388 2 891 333 241 197 8 chr13 40151721 40151838 -80132474 - B4A SINE B4 -61 231 93 2 891 1761 176 140 5 chr13 40152851 40153222 -80131090 + MTC LTR MaLR 1 421 0 2 891 527 295 28 28 chr13 40153424 40153567 -80130745 - ID_B1 SINE B4 0 224 82 2 891 646 236 28 0 chr13 40154166 40154310 -80130002 + B1_Mur3 SINE Alu 1 148 -1 2 891 377 221 44 44 chr13 40155155 40155292 -80129020 + L1MB8 LINE L1 6040 6176 -2 2 891 41 58 0 0 chr13 40155292 40155361 -80128951 + AT_rich Low_complexity Low_complexity 1 69 0 2 891 420 20 0 0 chr13 40155577 40155626 -80128686 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 891 321 253 215 31 chr13 40155780 40155943 -80128369 - B2_Mm2 SINE B2 -2 193 1 2 891 606 263 90 35 chr13 40155944 40156145 -80128167 - B4A SINE B4 -78 214 3 2 891 7268 31 1 8 chr13 40157805 40158732 -80125580 - L1Md_F3 LINE L1 -1 6583 5663 2 891 212 345 27 0 chr13 40158840 40158950 -80125362 + MIR SINE MIR 104 216 -46 2 891 354 45 0 0 chr13 40159328 40159372 -80124940 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 2 891 622 283 81 32 chr13 40159726 40159974 -80124338 - MER121 Unknown Unknown -86 326 67 2 891 22 0 0 0 chr13 40160838 40160860 -80123452 + AT_rich Low_complexity Low_complexity 1 22 0 2 891 474 338 70 0 chr13 40160860 40161058 -80123254 - B3A SINE B2 -2 214 3 2 891 306 276 96 47 chr13 40161064 40161404 -80122908 + L1MA4 LINE L1 5497 5918 -382 2 891 432 126 0 0 chr13 40161455 40161542 -80122770 + (GA)n Simple_repeat Simple_repeat 2 88 0 2 891 709 237 0 21 chr13 40163923 40164065 -80120247 + RSINE1 SINE B4 7 145 -20 2 891 252 0 0 0 chr13 40164080 40164108 -80120204 + (TGAA)n Simple_repeat Simple_repeat 3 30 0 2 891 290 286 74 103 chr13 40164431 40164634 -80119678 - B3A SINE B2 0 198 2 2 891 26 30 0 0 chr13 40164637 40164670 -80119642 + AT_rich Low_complexity Low_complexity 1 33 0 2 891 675 277 0 25 chr13 40164684 40164843 -80119469 - RSINE1 SINE B4 0 165 11 2 891 1162 75 0 0 chr13 40165207 40165353 -80118959 - B1_Mm SINE Alu 0 147 2 2 891 1152 35 14 7 chr13 40165844 40165989 -80118323 + B1_Mus1 SINE Alu 3 148 0 2 891 919 228 222 10 chr13 40166128 40166421 -80117891 + ORR1E LTR MaLR 5 359 0 2 891 22 0 0 0 chr13 40168705 40168727 -80115585 + AT_rich Low_complexity Low_complexity 1 22 0 2 891 1000 289 42 21 chr13 40169044 40169472 -80114840 + Lx9 LINE L1 7067 7503 -141 2 891 805 186 7 20 chr13 40169887 40170035 -80114277 + B1_Mur1 SINE Alu 3 148 -1 2 891 297 0 0 0 chr13 40170101 40170134 -80114178 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2 891 208 170 57 0 chr13 40171087 40171140 -80113172 + T-rich Low_complexity Low_complexity 3 58 0 2 891 711 124 0 0 chr13 40171550 40171663 -80112649 + (TTCC)n Simple_repeat Simple_repeat 4 116 0 2 891 770 299 53 20 chr13 40172826 40173311 -80111001 - L1M3 LINE L1 -395 5767 5260 2 891 434 252 86 39 chr13 40175225 40175353 -80108959 - B1F SINE Alu -1 148 15 2 891 370 287 40 93 chr13 40175353 40175375 -80108937 - ID_B1 SINE B4 -3 221 80 2 891 1064 172 45 31 chr13 40175618 40175840 -80108472 + URR1B DNA MER1_type 1 225 0 2 891 22 35 0 0 chr13 40176138 40176167 -80108145 + AT_rich Low_complexity Low_complexity 1 29 0 2 891 198 0 0 0 chr13 40176860 40176882 -80107430 + (A)n Simple_repeat Simple_repeat 1 22 0 2 891 434 287 29 14 chr13 40176921 40177059 -80107253 - B1F1 SINE Alu -9 140 1 2 891 790 238 54 5 chr13 40179945 40180092 -80104220 + B3A SINE B2 1 153 -45 2 891 1146 113 0 0 chr13 40180092 40180407 -80103905 + (CA)n Simple_repeat Simple_repeat 1 315 0 2 891 790 238 54 5 chr13 40180407 40180440 -80103872 + B3A SINE B2 154 190 -8 2 891 405 0 0 0 chr13 40180907 40180952 -80103360 + (TAAAA)n Simple_repeat Simple_repeat 2 46 0 2 891 425 307 103 5 chr13 40181271 40181484 -80102828 - L1MB1 LINE L1 -30 6159 5926 2 891 259 147 29 0 chr13 40181674 40181741 -80102571 - L1MB1 LINE L1 -470 5698 5627 2 891 1788 104 123 22 chr13 40181879 40182203 -80102109 + RLTR44E LTR ERVK 96 452 0 2 891 302 287 89 35 chr13 40182239 40182441 -80101871 + L1MD LINE L1 4889 5101 -1045 2 891 327 169 0 0 chr13 40182602 40182673 -80101639 + (CA)n Simple_repeat Simple_repeat 1 71 0 2 891 189 234 0 0 chr13 40183032 40183096 -80101216 + CT-rich Low_complexity Low_complexity 2 65 0 2 891 224 284 104 52 chr13 40184610 40184744 -80099568 + ID_B1 SINE B4 83 223 -1 2 891 285 281 30 50 chr13 40184760 40184861 -80099451 + BC1_Mm scRNA scRNA 11 109 -43 2 891 336 329 102 30 chr13 40185053 40185288 -80099024 - ORR1E LTR MaLR -86 273 22 2 891 344 344 14 90 chr13 40185600 40185811 -80098501 - MIRc SINE MIR -64 204 10 2 891 359 171 13 0 chr13 40186014 40186090 -80098222 + (TA)n Simple_repeat Simple_repeat 1 77 0 2 891 252 0 0 0 chr13 40186898 40186926 -80097386 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 891 6219 65 7 18 chr13 40186943 40187822 -80096490 - L1_Mus2 LINE L1 0 6566 5698 2 891 22 35 0 0 chr13 40187893 40187922 -80096390 + AT_rich Low_complexity Low_complexity 1 29 0 2 891 337 296 0 0 chr13 40188300 40188371 -80095941 + ID4 SINE ID 11 81 -2 2 891 205 348 77 51 chr13 40189080 40189226 -80095086 + MIRc SINE MIR 16 167 -95 2 891 623 13 13 0 chr13 40190443 40190519 -80093793 + (TAGA)n Simple_repeat Simple_repeat 4 80 0 2 891 683 115 8 0 chr13 40191470 40191600 -80092712 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 2 891 706 289 70 36 chr13 40192892 40193314 -80090998 + L1MB3 LINE L1 5544 5982 -189 2 891 207 0 0 0 chr13 40193314 40193337 -80090975 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 891 670 309 89 26 chr13 40193337 40193452 -80090860 + L1MB3 LINE L1 5983 6115 -56 2 891 503 329 18 12 chr13 40193576 40193739 -80090573 + RSINE1 SINE B4 2 165 0 2 891 227 178 0 0 chr13 40193740 40193785 -80090527 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 891 678 167 0 0 chr13 40194233 40194365 -80089947 + (CA)n Simple_repeat Simple_repeat 1 132 0 2 891 249 108 0 0 chr13 40195713 40195750 -80088562 + (CAT)n Simple_repeat Simple_repeat 3 39 0 2 891 422 326 64 81 chr13 40196053 40196350 -80087962 - B4 SINE B4 0 292 1 2 891 22 0 0 0 chr13 40196357 40196379 -80087933 + AT_rich Low_complexity Low_complexity 1 22 0 2 891 663 316 101 41 chr13 40196806 40197272 -80087040 + MLT1D LTR MaLR 2 495 -10 2 891 261 0 0 0 chr13 40197641 40197670 -80086642 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 891 478 329 7 35 chr13 40197673 40197815 -80086497 - RSINE1 SINE B4 -25 140 3 2 891 501 343 67 14 chr13 40197820 40198030 -80086282 - B4A SINE B4 -67 225 5 2 891 1476 295 28 16 chr13 40198062 40198561 -80085751 - Lx9 LINE L1 -659 6985 6481 2 891 512 305 100 19 chr13 40198586 40198907 -80085405 + Lx9 LINE L1 7167 7513 -131 2 891 877 284 63 13 chr13 40198890 40199208 -80085104 + Lx8 LINE L1 6172 6505 -968 2 891 551 272 102 7 chr13 40202015 40202152 -80082160 - RSINE1 SINE B4 -10 155 6 2 891 222 118 0 0 chr13 40202672 40202706 -80081606 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 891 316 233 96 0 chr13 40203516 40203589 -80080723 + ID2 SINE ID 2 81 -2 2 891 731 307 66 36 chr13 40204552 40204840 -80079472 + MER44B DNA MER2_type 2 294 -411 2 891 375 23 0 0 chr13 40206974 40207018 -80077294 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 891 504 0 0 0 chr13 40207018 40207073 -80077239 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 891 664 272 63 0 chr13 40207088 40207246 -80077066 - B3A SINE B2 -30 168 1 2 891 541 305 8 0 chr13 40207282 40207382 -80076930 + ID_B1 SINE B4 86 186 -38 2 891 542 267 83 92 chr13 40207382 40207696 -80076616 + B4 SINE B4 3 279 -13 2 891 381 381 90 0 chr13 40208912 40209180 -80075132 + MER2 DNA MER2_type 32 323 -22 2 891 279 0 0 0 chr13 40209185 40209216 -80075096 + (A)n Simple_repeat Simple_repeat 1 31 0 2 891 626 308 8 11 chr13 40209258 40209524 -80074788 + Lx9 LINE L1 7220 7484 -160 2 891 226 131 43 21 chr13 40209887 40209934 -80074378 + T-rich Low_complexity Low_complexity 3 50 0 2 891 23 54 0 0 chr13 40210361 40210398 -80073914 + AT_rich Low_complexity Low_complexity 1 37 0 2 891 1139 214 4 4 chr13 40211011 40211236 -80073076 + URR1B DNA MER1_type 1 225 0 2 891 5781 94 59 5 chr13 40211611 40211715 -80072597 - Lx2 LINE L1 0 6997 6887 2 891 183 80 0 0 chr13 40211715 40211740 -80072572 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 2 891 5781 94 59 5 chr13 40211740 40212482 -80071830 - Lx2 LINE L1 -111 6886 6107 2 891 1178 82 0 0 chr13 40212649 40212796 -80071516 + B1_Mus1 SINE Alu 1 147 -1 2 891 558 392 33 112 chr13 40213954 40214047 -80070265 - MER45C DNA Tip100 -5 948 860 3 891 334 0 0 0 chr13 40214047 40214092 -80070220 + L1_Mus2 LINE L1 6522 6566 0 3 891 558 392 33 112 chr13 40214092 40214363 -80069949 - MER45C DNA Tip100 -94 859 613 3 891 232 284 20 59 chr13 40214367 40214468 -80069844 - MLT1A1 LTR MaLR -1 407 311 3 891 248 267 47 56 chr13 40215115 40215222 -80069090 + MLT1A1 LTR MaLR 302 407 -1 3 891 234 0 0 0 chr13 40215851 40215877 -80068435 + (A)n Simple_repeat Simple_repeat 1 26 0 3 891 237 211 183 52 chr13 40217758 40217873 -80066439 + Charlie2b DNA MER1_type 2091 2220 -562 3 891 484 269 117 14 chr13 40217920 40218144 -80066168 - MIR SINE MIR -28 240 1 3 891 321 295 219 11 chr13 40218801 40218979 -80065333 - Lx8 LINE L1 -6 7467 7253 3 891 492 297 70 6 chr13 40218996 40219152 -80065160 - Lx8 LINE L1 -261 7212 7047 3 891 482 233 107 0 chr13 40219234 40219337 -80064975 - B3 SINE B2 -5 211 98 3 891 751 269 0 0 chr13 40219341 40219486 -80064826 - B3 SINE B2 -71 145 1 3 891 228 278 167 36 chr13 40220992 40221158 -80063154 + MIRm SINE MIR 20 204 -72 3 891 682 221 7 0 chr13 40221645 40221785 -80062527 + B1_Mur2 SINE Alu 2 142 -7 3 891 327 49 0 0 chr13 40221786 40221827 -80062485 + (CTAA)n Simple_repeat Simple_repeat 4 44 0 3 891 430 324 0 0 chr13 40221993 40222095 -80062217 + ID_B1 SINE B4 116 217 -7 3 891 450 0 0 0 chr13 40222735 40222785 -80061527 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 891 271 336 25 0 chr13 40224402 40224521 -80059791 - Lx9 LINE L1 -1739 5905 5784 3 891 2542 147 29 2 chr13 40224912 40225322 -80058990 + MTC LTR MaLR 1 421 0 3 891 221 83 28 0 chr13 40227025 40227061 -80057251 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 891 256 358 58 0 chr13 40227518 40227638 -80056674 + RSINE1 SINE B4 39 165 0 3 891 315 177 0 0 chr13 40228635 40228697 -80055615 + (TTG)n Simple_repeat Simple_repeat 2 63 0 3 891 511 304 72 76 chr13 40228727 40229109 -80055203 + MLT1E1A LTR MaLR 241 621 -59 3 891 315 275 0 14 chr13 40229386 40229456 -80054856 - tRNA-Ala-GCA tRNA tRNA -6 69 1 3 891 260 360 0 67 chr13 40229934 40230068 -80054244 - PB1 SINE Alu -2 125 1 3 891 373 261 11 11 chr13 40230346 40230439 -80053873 + PB1D10 SINE Alu 24 116 -1 3 891 266 310 14 14 chr13 40230446 40230518 -80053794 + B3A SINE B2 1 72 -126 3 891 342 358 11 38 chr13 40231583 40231766 -80052546 + MIR3 SINE MIR 24 201 -7 3 891 1199 314 99 47 chr13 40232217 40232852 -80051460 - MER44D DNA MER2_type -9 696 29 3 891 242 413 59 18 chr13 40234558 40234728 -80049584 - L2b LINE L2 -218 3157 2981 3 891 241 295 11 33 chr13 40234767 40234858 -80049454 - ORR1D2 LTR MaLR -2 368 280 3 891 362 290 129 27 chr13 40235840 40236118 -80048194 + MTEb LTR MaLR 65 367 -12 3 891 2174 336 52 54 chr13 40236123 40237152 -80047160 + MTEb-int LTR MaLR 1 1026 -554 3 891 21 0 0 0 chr13 40238074 40238095 -80046217 + AT_rich Low_complexity Low_complexity 1 21 0 3 891 242 311 74 68 chr13 40238877 40239039 -80045273 + Charlie15a DNA MER1_type 54 216 -8 3 892 773 188 118 59 chr13 40239650 40239854 -80044458 + B3 SINE B2 1 216 0 3 892 23 54 0 0 chr13 40240547 40240584 -80043728 + AT_rich Low_complexity Low_complexity 1 37 0 3 892 747 268 35 50 chr13 40240733 40240933 -80043379 - B3A SINE B2 0 198 2 3 892 189 0 0 0 chr13 40241475 40241496 -80042816 + (T)n Simple_repeat Simple_repeat 1 21 0 3 892 411 113 0 0 chr13 40241652 40241714 -80042598 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 892 5698 113 75 3 chr13 40241826 40242720 -80041592 - RMER17B LTR ERVK 0 958 1 3 892 303 319 0 0 chr13 40243021 40243093 -80041219 + PB1D10 SINE Alu 41 112 -5 3 892 296 240 39 8 chr13 40243193 40243323 -80040989 + GA-rich Low_complexity Low_complexity 3 136 0 3 892 190 108 61 15 chr13 40244144 40244210 -80040102 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 3 892 366 23 0 0 chr13 40244445 40244488 -80039824 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 892 225 305 58 47 chr13 40244847 40244933 -80039379 - B1F SINE Alu -51 98 12 3 892 394 379 6 12 chr13 40245053 40245216 -80039096 + B4A SINE B4 126 287 -5 3 892 396 0 0 0 chr13 40245221 40245265 -80039047 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 892 32 0 0 0 chr13 40245416 40245448 -80038864 + AT_rich Low_complexity Low_complexity 1 32 0 3 892 455 0 18 0 chr13 40245772 40245827 -80038485 + (TTA)n Simple_repeat Simple_repeat 2 57 0 3 892 263 255 38 0 chr13 40246646 40246752 -80037560 - L1ME3 LINE L1 -14 6148 6039 3 892 201 74 0 0 chr13 40247208 40247235 -80037077 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 892 304 226 36 0 chr13 40247364 40247448 -80036864 - Lx7 LINE L1 0 7696 7610 3 892 1388 219 150 67 chr13 40247477 40247532 -80036780 - Lx7 LINE L1 -202 7494 7417 3 892 456 72 0 0 chr13 40247532 40247601 -80036711 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 3 892 333 0 0 0 chr13 40247603 40247640 -80036672 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 892 1388 219 150 67 chr13 40247640 40248115 -80036197 - Lx7 LINE L1 -280 7416 6917 3 892 475 381 78 18 chr13 40248857 40249293 -80035019 - L1MEf LINE L1 -5178 1022 561 3 892 917 249 5 15 chr13 40252266 40252446 -80031866 + B3A SINE B2 1 180 -18 3 892 333 0 0 0 chr13 40252446 40252483 -80031829 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 892 917 249 5 15 chr13 40252483 40252502 -80031810 + B3A SINE B2 181 198 0 3 892 328 318 37 15 chr13 40253451 40253585 -80030727 + L1MD LINE L1 2778 2914 -3232 3 892 315 279 110 35 chr13 40253935 40254080 -80030232 + L1MDa LINE L1 1892 2047 -4586 3 892 1017 291 109 28 chr13 40254486 40255726 -80028586 + L1MDa LINE L1 2341 3687 -2850 3 892 333 300 0 0 chr13 40255860 40255950 -80028362 - B1_Mur2 SINE Alu -1 148 59 3 892 435 314 75 91 chr13 40256052 40256413 -80027899 - ORR1E LTR MaLR -1 358 4 3 892 415 329 40 40 chr13 40256413 40256666 -80027646 + L1MDa LINE L1 3979 4231 -2306 3 892 339 85 0 0 chr13 40256893 40256940 -80027372 + (TTA)n Simple_repeat Simple_repeat 1 47 0 3 892 1076 74 6 6 chr13 40256941 40257105 -80027207 - L1_Mus4 LINE L1 -19 6617 6454 3 892 427 297 87 75 chr13 40257123 40257389 -80026923 + B4A SINE B4 24 292 0 3 892 532 318 6 92 chr13 40257561 40257765 -80026547 + B3A SINE B2 1 189 -27 3 892 412 299 7 0 chr13 40257828 40257975 -80026337 + L1MDa LINE L1 4719 4866 -1671 3 892 14098 50 0 0 chr13 40258016 40259856 -80024456 - L1_Mm LINE L1 -649 5234 3395 3 892 1507 44 0 5 chr13 40259850 40260057 -80024255 + L1_Mm LINE L1 3178 3383 -2500 3 892 1266 60 0 0 chr13 40260051 40260219 -80024093 - L1_Mm LINE L1 -649 5234 5067 3 892 3194 33 0 0 chr13 40260225 40260616 -80023696 + L1_Mm LINE L1 5235 5625 -258 3 892 3267 23 18 5 chr13 40260616 40261005 -80023307 + L1Md_F3 LINE L1 6177 6570 -14 3 892 282 314 68 25 chr13 40261034 40261269 -80023043 + L1MDa LINE L1 5086 5330 -1207 3 892 260 224 63 38 chr13 40261337 40261416 -80022896 + L1MDa LINE L1 5455 5535 -1002 3 892 237 132 0 0 chr13 40261607 40261645 -80022667 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 3 892 473 128 39 0 chr13 40262277 40262379 -80021933 + (TA)n Simple_repeat Simple_repeat 1 106 0 3 892 322 102 0 39 chr13 40263106 40263157 -80021155 + HAL1-3A_ME LINE L1 1975 2023 -835 3 892 23 0 0 0 chr13 40264183 40264206 -80020106 + AT_rich Low_complexity Low_complexity 1 23 0 3 892 479 263 38 27 chr13 40264338 40264523 -80019789 + ID_B1 SINE B4 11 224 0 3 892 181 369 12 23 chr13 40264894 40264980 -80019332 - L2b LINE L2 0 3375 3291 3 892 1822 204 66 13 chr13 40265214 40265591 -80018721 - MTB_Mm LTR MaLR -8 399 3 3 892 435 314 20 68 chr13 40265603 40265750 -80018562 - ID_B1 SINE B4 -1 223 84 3 892 341 388 41 6 chr13 40266187 40266358 -80017954 - Tigger5 DNA MER2_type -2183 223 47 3 892 971 89 20 0 chr13 40266477 40266623 -80017689 + (GGGAGA)n Simple_repeat Simple_repeat 2 150 0 3 892 732 320 73 42 chr13 40270310 40270571 -80013741 + B4A SINE B4 24 292 0 3 892 339 261 21 21 chr13 40270585 40270679 -80013633 + (CATA)n Simple_repeat Simple_repeat 4 97 0 3 892 351 250 154 0 chr13 40270691 40270795 -80013517 + HAL1-3A_ME LINE L1 1974 2093 -765 3 892 232 91 0 43 chr13 40271928 40271974 -80012338 + (GGGTG)n Simple_repeat Simple_repeat 3 46 0 3 892 261 0 0 0 chr13 40272660 40272689 -80011623 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 892 254 29 0 28 chr13 40272735 40272771 -80011541 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 3 892 282 125 0 0 chr13 40272817 40272865 -80011447 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 892 602 233 81 164 chr13 40272872 40273170 -80011142 - B4A SINE B4 -18 274 2 3 892 671 306 37 58 chr13 40273769 40274012 -80010300 + B4A SINE B4 16 253 -39 3 892 240 254 0 0 chr13 40274041 40274108 -80010204 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 892 662 139 29 0 chr13 40274703 40274840 -80009472 + (TAGA)n Simple_repeat Simple_repeat 1 141 0 3 892 294 282 35 97 chr13 40275647 40275778 -80008534 + PB1D7 SINE Alu 16 140 -9 3 892 500 265 148 112 chr13 40276357 40276714 -80007598 + MLT1A LTR MaLR 1 370 -4 3 892 32 0 0 0 chr13 40277099 40277131 -80007181 + AT_rich Low_complexity Low_complexity 1 32 0 3 892 234 91 0 0 chr13 40278314 40278347 -80005965 + (TTAA)n Simple_repeat Simple_repeat 3 35 0 3 892 862 184 144 6 chr13 40278351 40278531 -80005781 - B3 SINE B2 -11 205 1 3 892 365 212 8 126 chr13 40279207 40279326 -80004986 + MTE2a LTR MaLR 5 109 -270 3 892 1136 249 187 38 chr13 40279531 40279874 -80004438 - MTD LTR MaLR -6 413 20 3 892 197 309 106 69 chr13 40281705 40281865 -80002447 - MIRb SINE MIR -52 216 51 3 892 329 94 4 4 chr13 40283770 40283824 -80000488 - MTD LTR MaLR -342 54 1 3 892 2530 142 23 0 chr13 40284115 40284524 -79999788 - MTC LTR MaLR -12 409 1 3 892 278 189 37 98 chr13 40285368 40285450 -79998862 + MLT2B2 LTR ERVL 178 254 -463 3 892 279 309 81 9 chr13 40285475 40285586 -79998726 + MLT2B2 LTR ERVL 434 552 -10 3 892 280 302 84 9 chr13 40286017 40286124 -79998188 + MLT2B2 LTR ERVL 438 552 -10 3 892 360 316 150 13 chr13 40286229 40286463 -79997849 + ORR1E LTR MaLR 14 279 -80 3 892 480 215 0 0 chr13 40286747 40286854 -79997458 + A-rich Low_complexity Low_complexity 1 107 0 3 892 1356 261 50 139 chr13 40288393 40289241 -79995071 + RMER19A LTR ERVK 1 737 0 3 892 305 300 42 83 chr13 40289241 40289361 -79994951 - MLT1F2 LTR MaLR -56 624 391 4 892 281 322 50 63 chr13 40289438 40289597 -79994715 - MLT1F2 LTR MaLR -362 198 42 4 892 410 290 0 20 chr13 40289638 40289740 -79994572 - PB1D9 SINE Alu -20 100 1 4 892 737 286 30 0 chr13 40289762 40289965 -79994347 - B3 SINE B2 -7 209 1 4 892 334 345 51 10 chr13 40290523 40290719 -79993593 - MLT1B LTR MaLR -22 368 165 4 892 217 368 0 0 chr13 40290722 40290790 -79993522 + polypyrimidine Low_complexity Low_complexity 2 69 0 4 892 1941 40 28 0 chr13 40291237 40291485 -79992827 + L1Md_F2 LINE L1 5940 6194 -388 4 892 491 127 0 14 chr13 40291595 40291667 -79992645 + B2_Mm1t SINE B2 38 108 -85 4 892 380 383 99 54 chr13 40291743 40292168 -79992144 - MLT1H1 LTR MaLR -111 444 1 4 892 550 201 65 29 chr13 40292428 40292566 -79991746 - B3A SINE B2 -53 145 3 4 892 509 368 73 40 chr13 40292685 40293013 -79991299 + MLT1A LTR MaLR 36 374 0 4 892 324 0 0 0 chr13 40294089 40294125 -79990187 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 892 490 290 63 84 chr13 40296835 40297119 -79987193 + MLT1B LTR MaLR 3 295 -172 4 892 207 0 0 0 chr13 40297145 40297168 -79987144 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 4 892 327 49 0 0 chr13 40297237 40297278 -79987034 + (CATTT)n Simple_repeat Simple_repeat 5 45 0 4 892 593 289 28 32 chr13 40298652 40298870 -79985442 + ID_B1 SINE B4 3 219 -5 4 892 25 31 0 0 chr13 40298870 40298902 -79985410 + AT_rich Low_complexity Low_complexity 1 32 0 4 892 510 17 0 0 chr13 40299177 40299236 -79985076 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 892 250 279 89 124 chr13 40299677 40299992 -79984320 - ORR1A4 LTR MaLR -18 311 8 4 892 45 0 0 0 chr13 40300373 40300418 -79983894 + AT_rich Low_complexity Low_complexity 1 45 0 4 892 219 36 0 0 chr13 40300756 40300784 -79983528 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 4 892 797 51 29 43 chr13 40301559 40301766 -79982546 + (TAGA)n Simple_repeat Simple_repeat 1 203 0 4 892 297 0 0 0 chr13 40304249 40304282 -79980030 + (GAAA)n Simple_repeat Simple_repeat 3 35 0 4 892 626 0 0 13 chr13 40304282 40304356 -79979956 + (GGGA)n Simple_repeat Simple_repeat 4 77 0 4 892 666 278 19 81 chr13 40304732 40304943 -79979369 - B3A SINE B2 0 198 1 4 892 398 266 160 80 chr13 40304943 40304979 -79979333 - MER2 DNA MER2_type -116 229 197 4 892 1186 193 0 22 chr13 40304979 40305207 -79979105 - URR1B DNA MER1_type -2 223 1 4 892 398 266 160 80 chr13 40305207 40305366 -79978946 - MER2 DNA MER2_type -149 196 18 4 892 1022 126 0 6 chr13 40306153 40306321 -79977991 + (GGAA)n Simple_repeat Simple_repeat 4 170 0 4 892 4083 135 10 19 chr13 40306399 40307085 -79977227 + Lx2B LINE L1 6320 6999 -1 4 892 1355 205 142 3 chr13 40307206 40307509 -79976803 + ORR1B2 LTR MaLR 15 359 -8 4 892 540 338 34 34 chr13 40307598 40307831 -79976481 - MER2 DNA MER2_type -17 328 96 4 892 256 298 0 0 chr13 40307905 40307962 -79976350 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 892 984 176 133 20 chr13 40307996 40308199 -79976113 + URR1A DNA MER1_type 1 226 0 4 892 245 369 6 0 chr13 40308630 40308790 -79975522 - L1M5 LINE L1 -340 5784 5624 4 892 465 365 24 14 chr13 40309004 40309215 -79975097 - MER20 DNA MER1_type -6 213 1 4 892 265 298 73 51 chr13 40309277 40309454 -79974858 - MIRb SINE MIR -57 211 31 4 892 311 44 22 0 chr13 40309738 40309783 -79974529 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 892 36 23 0 0 chr13 40310420 40310463 -79973849 + AT_rich Low_complexity Low_complexity 1 43 0 4 892 377 358 7 7 chr13 40310577 40310726 -79973586 - MLT1F-int LTR MaLR -333 1156 1008 4 892 634 318 201 39 chr13 40310949 40311545 -79972767 - MLT1F-int LTR MaLR -609 880 188 4 892 203 189 19 0 chr13 40312026 40312079 -79972233 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 892 26 0 0 0 chr13 40312148 40312174 -79972138 + AT_rich Low_complexity Low_complexity 1 26 0 4 892 21 0 0 0 chr13 40312205 40312226 -79972086 + AT_rich Low_complexity Low_complexity 1 21 0 4 892 24 0 0 0 chr13 40312486 40312510 -79971802 + AT_rich Low_complexity Low_complexity 1 24 0 4 892 2966 196 26 0 chr13 40312521 40313128 -79971184 - Lx9 LINE L1 -1 7643 7021 4 892 3966 209 20 7 chr13 40313166 40314263 -79970049 + Lx6 LINE L1 5404 6513 -947 4 892 3055 172 0 5 chr13 40314263 40314830 -79969482 - L1_Mm LINE L1 -683 5200 4637 4 892 2741 139 0 19 chr13 40314831 40314909 -79969403 + L1_Mm LINE L1 5212 5287 -596 4 892 238 26 25 25 chr13 40314909 40314949 -79969363 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 4 892 3616 65 0 0 chr13 40314950 40315397 -79968915 + L1_Mus1 LINE L1 6121 6567 0 4 892 2741 139 0 19 chr13 40315397 40315778 -79968534 + L1_Mm LINE L1 5288 5664 -219 4 892 192 40 0 0 chr13 40317822 40317847 -79966465 + (CAA)n Simple_repeat Simple_repeat 3 27 0 4 892 23 68 0 0 chr13 40317906 40317950 -79966362 + AT_rich Low_complexity Low_complexity 1 44 0 4 892 4918 66 3 42 chr13 40317988 40318673 -79965639 - L1_Mus3 LINE L1 -5 6633 5976 4 892 251 182 0 0 chr13 40318964 40319008 -79965304 + GA-rich Low_complexity Low_complexity 2 45 0 4 892 547 214 13 0 chr13 40319008 40319031 -79965281 + polypurine Low_complexity Low_complexity 2 25 0 4 892 306 0 0 0 chr13 40319031 40319065 -79965247 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 4 892 547 214 13 0 chr13 40319065 40319195 -79965117 + GA-rich Low_complexity Low_complexity 26 156 0 4 892 248 252 73 27 chr13 40319249 40319359 -79964953 + L1M2 LINE L1 2129 2243 -3897 4 892 504 218 23 53 chr13 40319391 40319522 -79964790 + B1_Mur1 SINE Alu 6 132 -17 4 892 549 286 63 36 chr13 40319612 40319903 -79964409 + Lx8 LINE L1 6070 6366 -1107 4 892 2243 288 90 22 chr13 40320388 40321362 -79962950 + Lx8 LINE L1 6372 7412 -61 4 892 470 170 11 0 chr13 40321419 40321513 -79962799 + GA-rich Low_complexity Low_complexity 4 98 0 4 892 857 324 69 52 chr13 40321538 40322120 -79962192 + L1M2 LINE L1 2331 2914 -3229 4 892 438 20 0 0 chr13 40322120 40322171 -79962141 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 892 857 324 69 52 chr13 40322171 40322937 -79961375 + L1M2 LINE L1 2915 3675 -2468 4 892 293 0 0 26 chr13 40322937 40322975 -79961337 + (CAA)n Simple_repeat Simple_repeat 3 39 0 4 892 857 324 69 52 chr13 40322975 40323131 -79961181 + L1M2 LINE L1 3676 3861 -2282 4 892 1421 12 6 0 chr13 40323197 40323364 -79960948 + (TTC)n Simple_repeat Simple_repeat 2 169 0 4 892 350 279 99 50 chr13 40323479 40323660 -79960652 + L1M2 LINE L1 4020 4209 -1934 4 892 311 306 25 81 chr13 40323693 40323853 -79960459 + B3A SINE B2 1 151 -47 4 892 575 259 65 88 chr13 40323890 40324412 -79959900 + L1M2 LINE L1 4193 4714 -1429 4 892 240 343 50 0 chr13 40324437 40324536 -79959776 - MER57D LTR ERV1 -163 248 145 4 892 693 271 81 78 chr13 40325008 40325375 -79958937 + MTE2a LTR MaLR 2 352 -67 4 892 423 56 0 0 chr13 40326083 40326137 -79958175 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 892 1160 111 0 6 chr13 40326141 40326322 -79957990 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 892 405 0 0 0 chr13 40327090 40327135 -79957177 + (TTTTG)n Simple_repeat Simple_repeat 5 49 0 4 892 224 152 0 78 chr13 40327342 40327406 -79956906 + A-rich Low_complexity Low_complexity 3 61 0 4 892 265 161 125 0 chr13 40327412 40327468 -79956844 - Lx8 LINE L1 -489 6984 6922 4 892 1542 275 14 68 chr13 40327713 40328308 -79956004 + RMER1B Other Other 7 534 -532 4 892 1976 128 34 28 chr13 40328341 40328694 -79955618 + RMER1A Other Other 661 1015 -15 4 892 216 0 0 0 chr13 40328694 40328718 -79955594 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 892 410 330 5 57 chr13 40328774 40328967 -79955345 + Lx8 LINE L1 7076 7258 -215 4 892 258 32 0 0 chr13 40329140 40329171 -79955141 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 892 552 254 25 0 chr13 40329184 40329302 -79955010 + RSINE1 SINE B4 9 129 -36 4 892 297 0 0 0 chr13 40329349 40329382 -79954930 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 892 965 95 24 0 chr13 40329445 40329614 -79954698 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 4 892 275 298 93 77 chr13 40330013 40330195 -79954117 - ORR1E LTR MaLR -174 185 1 4 892 762 248 1 30 chr13 40330281 40330441 -79953871 + RSINE1 SINE B4 3 155 -10 4 892 1311 47 0 0 chr13 40330441 40330612 -79953700 + (GGGAGA)n Simple_repeat Simple_repeat 3 173 0 4 892 876 285 35 15 chr13 40330648 40330908 -79953404 - MTE-int LTR MaLR -119 1461 1197 4 892 259 268 28 0 chr13 40330877 40330948 -79953364 - MTE-int LTR MaLR -515 1065 993 4 892 1509 173 0 0 chr13 40331046 40331300 -79953012 - MTC LTR MaLR 0 421 168 4 892 459 52 0 0 chr13 40331414 40331472 -79952840 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 892 291 349 84 51 chr13 40332136 40332314 -79951998 - MLT1A1 LTR MaLR -21 387 204 4 892 730 283 25 98 chr13 40332363 40332649 -79951663 + B4A SINE B4 28 292 0 4 892 195 146 0 0 chr13 40333432 40333473 -79950839 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 4 892 228 67 0 0 chr13 40333765 40333795 -79950517 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 4 892 209 331 86 8 chr13 40334289 40334417 -79949895 + MIRb SINE MIR 113 250 -18 4 892 472 328 69 0 chr13 40334665 40334796 -79949516 - RSINE1 SINE B4 -22 143 4 4 892 297 128 0 0 chr13 40334798 40334845 -79949467 + (CATATA)n Simple_repeat Simple_repeat 1 47 0 4 892 22 35 0 0 chr13 40335210 40335239 -79949073 + AT_rich Low_complexity Low_complexity 1 29 0 4 892 443 290 81 0 chr13 40335467 40335591 -79948721 - ID_B1 SINE B4 -4 220 87 4 892 975 282 47 69 chr13 40335609 40336157 -79948155 - L1MC1 LINE L1 -19 6314 5779 4 892 232 195 34 28 chr13 40336728 40336907 -79947405 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 892 341 264 75 14 chr13 40337138 40337325 -79946987 - L1MA6 LINE L1 -30 6270 6069 4 892 188 130 76 0 chr13 40337535 40337627 -79946685 + (TA)n Simple_repeat Simple_repeat 1 99 0 4 892 252 59 0 0 chr13 40337667 40337701 -79946611 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 892 686 338 0 101 chr13 40337726 40338042 -79946270 - B4A SINE B4 -2 290 7 4 892 220 331 106 29 chr13 40338238 40338435 -79945877 + MIR SINE MIR 57 268 0 4 892 207 0 0 0 chr13 40339822 40339845 -79944467 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 892 257 350 41 14 chr13 40340532 40340677 -79943635 + L1M3b LINE L1 236 384 -5897 5 892 307 254 92 31 chr13 40340689 40340819 -79943493 + L1M3b LINE L1 3781 3918 -2432 5 892 2436 176 34 25 chr13 40340813 40341290 -79943022 - Lx LINE L1 -21 6633 6153 5 892 4475 101 16 1 chr13 40341275 40342027 -79942285 + Lx LINE L1 5419 6186 -468 5 892 344 330 106 9 chr13 40342034 40342373 -79941939 + L1M2 LINE L1 4671 5042 -1101 5 892 2365 162 29 0 chr13 40342370 40342898 -79941414 - Lx5 LINE L1 -1058 5992 5431 5 892 538 285 87 22 chr13 40342893 40343076 -79941236 + Lx5 LINE L1 6855 7049 -1 5 892 669 303 45 42 chr13 40343060 40343439 -79940873 + L1MA7 LINE L1 4979 5358 -785 5 892 189 214 0 0 chr13 40343464 40343506 -79940806 + (CATA)n Simple_repeat Simple_repeat 4 45 0 5 892 316 264 81 15 chr13 40343506 40343676 -79940636 + L1MA7 LINE L1 5333 5509 -794 5 892 648 38 0 0 chr13 40343707 40343786 -79940526 + (GA)n Simple_repeat Simple_repeat 2 80 0 5 892 549 305 61 29 chr13 40343786 40344032 -79940280 + L1MA7 LINE L1 5598 5851 -440 5 892 295 271 63 72 chr13 40344215 40344438 -79939874 + L1MA7 LINE L1 6068 6288 -3 5 892 849 317 78 94 chr13 40344570 40345031 -79939281 + MLT2B2 LTR ERVL 1 455 -60 5 892 228 111 0 0 chr13 40345031 40345067 -79939245 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 892 849 317 78 94 chr13 40345067 40345117 -79939195 + MLT2B2 LTR ERVL 456 504 -11 5 892 346 339 0 0 chr13 40345366 40345478 -79938834 + MIR SINE MIR 41 152 -110 5 892 2233 193 44 36 chr13 40345924 40346770 -79937542 + L1_Mur2 LINE L1 868 2249 -3628 5 892 384 22 0 0 chr13 40346811 40346856 -79937456 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 892 217 360 64 14 chr13 40347700 40347841 -79936471 - MIRb SINE MIR -115 153 6 5 892 371 244 164 9 chr13 40347916 40348032 -79936280 - ID_B1 SINE B4 -4 220 87 5 892 874 180 17 17 chr13 40348510 40348685 -79935627 - URR1A DNA MER1_type 0 226 52 5 892 633 302 137 34 chr13 40348810 40349043 -79935269 + B4A SINE B4 14 270 -22 5 892 350 61 45 15 chr13 40349056 40349123 -79935189 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 892 654 327 92 42 chr13 40349150 40349321 -79934991 - MLT1C LTR MaLR -26 441 268 5 892 1708 194 89 34 chr13 40349321 40349679 -79934633 - ORR1C1 LTR MaLR 0 378 1 5 892 654 307 86 147 chr13 40349679 40349889 -79934423 - MLT1C LTR MaLR -200 267 6 5 892 564 15 0 0 chr13 40351612 40351677 -79932635 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 5 892 199 190 17 17 chr13 40351702 40351761 -79932551 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 892 491 272 140 82 chr13 40353245 40353601 -79930711 + MLT2C2 LTR ERVL 1 377 -87 5 892 384 59 0 0 chr13 40353679 40353730 -79930582 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 892 1119 276 39 21 chr13 40354098 40354431 -79929881 + MTEa LTR MaLR 39 377 -2 5 892 297 266 0 0 chr13 40355530 40355609 -79928703 + L1MA4 LINE L1 5844 5922 -378 5 892 10208 43 1 4 chr13 40355655 40357602 -79926710 - L1Md_F2 LINE L1 0 6582 4640 5 892 1660 230 68 10 chr13 40357611 40357994 -79926318 - MTD LTR MaLR -14 405 1 5 892 741 210 0 0 chr13 40358018 40358273 -79926039 + (CA)n Simple_repeat Simple_repeat 1 255 0 5 892 815 272 80 12 chr13 40359492 40359741 -79924571 + B4A SINE B4 5 270 -22 5 892 360 164 0 0 chr13 40359841 40359908 -79924404 + GA-rich Low_complexity Low_complexity 2 68 0 5 892 897 74 0 0 chr13 40360964 40361086 -79923226 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 5 892 1098 135 0 0 chr13 40361086 40361264 -79923048 + (GGGAA)n Simple_repeat Simple_repeat 3 180 0 5 892 229 102 60 20 chr13 40361264 40361314 -79922998 + GA-rich Low_complexity Low_complexity 3 54 0 5 892 418 335 107 17 chr13 40361318 40361552 -79922760 + MER2 DNA MER2_type 74 328 -17 5 892 199 72 23 23 chr13 40362047 40362090 -79922222 + (CAAAAA)n Simple_repeat Simple_repeat 2 44 0 5 892 2114 172 92 3 chr13 40364038 40364417 -79919895 - MTC LTR MaLR -8 413 1 5 892 1079 158 38 5 chr13 40366668 40366853 -79917459 + B2_Mm2 SINE B2 5 195 0 5 892 396 332 104 12 chr13 40366861 40367111 -79917201 + B4A SINE B4 2 274 -18 5 892 23 0 0 0 chr13 40367686 40367709 -79916603 + AT_rich Low_complexity Low_complexity 1 23 0 5 892 342 0 0 0 chr13 40367860 40367898 -79916414 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 892 668 208 8 8 chr13 40368278 40368399 -79915913 + B3 SINE B2 3 123 -93 5 892 251 289 114 114 chr13 40368725 40368901 -79915411 - LTR88c LTR Genie? -563 299 124 5 892 225 339 0 0 chr13 40369253 40369315 -79914997 + tRNA-Ala-GCY_ tRNA tRNA 1 62 -13 5 892 327 392 0 0 chr13 40369491 40369598 -79914714 - RSINE1 SINE B4 -56 109 3 5 892 339 123 106 15 chr13 40369780 40369846 -79914466 + HAL1-3A_ME LINE L1 1947 2018 -840 5 893 925 240 38 19 chr13 40370458 40370670 -79913642 - B3 SINE B2 0 216 1 5 893 1881 181 24 123 chr13 40372214 40372406 -79911906 - ORR1D1 LTR MaLR 0 374 231 5 893 1061 123 6 0 chr13 40372406 40372585 -79911727 + (CAGG)n Simple_repeat Simple_repeat 1 180 0 5 893 1881 181 24 123 chr13 40372585 40372807 -79911505 - ORR1D1 LTR MaLR -144 230 1 5 893 395 312 38 80 chr13 40373908 40374223 -79910089 + RMER15 LTR ERVL 3 391 -184 5 893 378 0 0 0 chr13 40374333 40374375 -79909937 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 893 384 304 54 60 chr13 40376668 40376836 -79907476 + B4 SINE B4 2 168 -124 5 893 979 132 11 0 chr13 40376942 40377116 -79907196 + (TC)n Simple_repeat Simple_repeat 1 176 0 5 893 297 0 0 0 chr13 40377116 40377148 -79907164 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 893 180 70 70 0 chr13 40378005 40378048 -79906264 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 5 893 273 287 20 130 chr13 40378134 40378234 -79906078 + B1F1 SINE Alu 1 89 -60 5 893 221 281 70 0 chr13 40378244 40378301 -79906011 + B4A SINE B4 80 140 -152 5 893 404 341 24 0 chr13 40378257 40378383 -79905929 + B1F SINE Alu 12 140 -9 5 893 564 15 0 0 chr13 40378597 40378662 -79905650 + (TC)n Simple_repeat Simple_repeat 1 65 0 5 893 366 74 0 0 chr13 40378662 40378715 -79905597 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 893 608 301 0 24 chr13 40378923 40379090 -79905222 + RSINE1 SINE B4 3 165 0 5 893 407 19 0 19 chr13 40379093 40379146 -79905166 + (TAA)n Simple_repeat Simple_repeat 2 53 0 5 893 738 160 0 0 chr13 40384942 40385073 -79899239 + (TATATG)n Simple_repeat Simple_repeat 5 135 0 5 893 288 279 35 11 chr13 40386707 40386794 -79897518 + L2a LINE L2 3337 3425 -1 5 893 572 0 0 0 chr13 40387237 40387302 -79897010 + L1Md_F2 LINE L1 5913 5977 -605 5 893 498 305 34 6 chr13 40387327 40387502 -79896810 + HAL1-2a_MD LINE L1 2326 2505 -519 5 893 315 299 65 0 chr13 40387770 40387847 -79896465 + ID4_ SINE ID 2 83 0 5 893 479 112 12 0 chr13 40387866 40387946 -79896366 + (GGGA)n Simple_repeat Simple_repeat 4 84 0 5 893 482 331 15 22 chr13 40387983 40388119 -79896193 + RSINE1 SINE B4 13 147 -18 5 893 387 0 0 0 chr13 40388126 40388169 -79896143 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 893 481 278 56 44 chr13 40388231 40388483 -79895829 + L1M4 LINE L1 887 1141 -5401 5 893 251 291 63 0 chr13 40389051 40389130 -79895182 - MLT1E3 LTR MaLR -454 170 87 5 893 207 88 0 0 chr13 40389219 40389253 -79895059 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 5 893 653 228 14 14 chr13 40389347 40389494 -79894818 + B1_Mur2 SINE Alu 3 149 0 5 893 576 328 86 57 chr13 40389602 40389916 -79894396 - ORR1E LTR MaLR -29 330 8 5 893 341 290 65 8 chr13 40390135 40390370 -79893942 + L1MD3 LINE L1 5833 6088 -91 5 893 479 17 17 0 chr13 40390552 40390612 -79893700 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 5 893 1211 165 201 99 chr13 40390710 40391053 -79893259 + ORR1C1 LTR MaLR 1 378 0 5 893 25 83 0 0 chr13 40391291 40391351 -79892961 + AT_rich Low_complexity Low_complexity 1 60 0 5 893 1005 121 0 0 chr13 40391380 40391554 -79892758 + (TG)n Simple_repeat Simple_repeat 1 174 0 5 893 361 315 44 37 chr13 40391658 40391793 -79892519 - B4A SINE B4 -153 139 4 5 893 478 323 175 25 chr13 40391866 40392152 -79892160 + MLT1C LTR MaLR 54 382 -85 5 893 1329 297 46 13 chr13 40392208 40392668 -79891644 + Lx7 LINE L1 6826 7300 -396 5 893 387 0 0 0 chr13 40392732 40392775 -79891537 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 893 492 72 0 0 chr13 40393207 40393276 -79891036 + (TA)n Simple_repeat Simple_repeat 1 69 0 5 893 243 0 0 0 chr13 40393276 40393303 -79891009 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 893 433 263 0 0 chr13 40393307 40393406 -79890906 - PB1D10 SINE Alu -18 99 1 5 893 699 99 0 0 chr13 40393675 40393776 -79890536 + (GAAA)n Simple_repeat Simple_repeat 2 102 0 5 893 1046 123 6 0 chr13 40393779 40393950 -79890362 + (GGAA)n Simple_repeat Simple_repeat 2 173 0 5 893 828 134 0 0 chr13 40394221 40394355 -79889957 + (GA)n Simple_repeat Simple_repeat 2 135 0 5 893 324 0 0 0 chr13 40394789 40394825 -79889487 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 893 312 343 49 1 chr13 40396439 40396557 -79887755 + B4A SINE B4 6 127 -97 5 893 2294 112 6 12 chr13 40396623 40396950 -79887362 + ORR1A2 LTR MaLR 1 325 -2 5 893 233 311 42 0 chr13 40397406 40397525 -79886787 + RMER12 LTR ERVK 745 868 -454 5 893 622 301 28 32 chr13 40397562 40397716 -79886596 - B4A SINE B4 -8 284 129 5 893 194 0 0 37 chr13 40397716 40397743 -79886569 + (CACCC)n Simple_repeat Simple_repeat 1 26 0 5 893 622 301 28 32 chr13 40397743 40397873 -79886439 - B4A SINE B4 -164 128 2 5 893 572 289 65 52 chr13 40398115 40398345 -79885967 - MER21B LTR ERV1 -69 794 562 5 893 357 353 69 6 chr13 40399333 40399507 -79884805 + MER5A DNA MER1_type 2 186 -3 5 893 231 338 158 0 chr13 40399583 40399722 -79884590 + MER5B DNA MER1_type 10 170 -8 5 893 254 271 105 12 chr13 40400161 40400247 -79884065 + MLT1A1 LTR MaLR 1 94 -314 5 893 281 226 0 97 chr13 40400420 40400463 -79883849 + MLT1A1 LTR MaLR 316 352 -56 5 893 1574 153 135 0 chr13 40400463 40400751 -79883561 + ORR1A2 LTR MaLR 1 327 0 6 893 281 226 0 97 chr13 40400751 40400810 -79883502 + MLT1A1 LTR MaLR 353 408 0 5 893 295 356 0 78 chr13 40402113 40402241 -79882071 + PB1D7 SINE Alu 3 120 0 6 893 1595 299 46 25 chr13 40402530 40403179 -79881133 + Lx8 LINE L1 6301 6963 -510 6 893 498 314 0 17 chr13 40403435 40403555 -79880757 + B4A SINE B4 121 238 -54 6 893 943 265 253 45 chr13 40403555 40404025 -79880287 - RLTR20C LTR ERVK 0 568 1 6 893 2202 157 102 2 chr13 40404078 40404558 -79879754 - MYSERV16_I-int LTR ERVK -23 2303 1776 6 893 618 246 0 17 chr13 40404620 40404736 -79879576 - B4A SINE B4 -54 238 125 6 893 186 103 0 0 chr13 40404737 40404766 -79879546 + (C)n Simple_repeat Simple_repeat 1 29 0 6 893 3876 165 59 27 chr13 40404793 40406458 -79877854 - MYSERV16_I-int LTR ERVK -555 1771 5 6 893 292 79 63 0 chr13 40406458 40406521 -79877791 + (TATAA)n Simple_repeat Simple_repeat 4 70 0 6 893 378 0 0 0 chr13 40407121 40407163 -79877149 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 893 225 243 135 119 chr13 40407241 40407295 -79877017 - RLTR20D LTR ERVK -38 496 430 6 893 342 0 0 0 chr13 40407295 40407333 -79876979 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 893 775 264 90 60 chr13 40407333 40407662 -79876650 - RLTR20D LTR ERVK -102 476 1 6 893 773 206 0 7 chr13 40407775 40407912 -79876400 + B1_Mus2 SINE Alu 6 141 -6 6 893 372 77 0 0 chr13 40407913 40407965 -79876347 + (GAAA)n Simple_repeat Simple_repeat 3 54 0 6 893 1202 90 0 11 chr13 40407965 40408144 -79876168 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 6 893 323 332 37 11 chr13 40408180 40408390 -79875922 + L1MEf LINE L1 1408 1657 -4543 6 893 999 85 0 0 chr13 40408678 40408819 -79875493 - L1Md_F2 LINE L1 -13 6569 6429 6 893 249 159 0 0 chr13 40408950 40408994 -79875318 + (CAT)n Simple_repeat Simple_repeat 3 46 0 6 893 343 246 40 3 chr13 40409465 40409625 -79874687 + L1_Mur3 LINE L1 4512 4679 -1198 6 893 270 319 56 46 chr13 40409661 40409967 -79874345 + L1M3 LINE L1 4894 5202 -938 6 893 324 236 49 98 chr13 40410070 40410192 -79874120 - RCHARR1 DNA MER1_type -2 972 857 6 893 313 229 127 40 chr13 40410211 40410361 -79873951 - RCHARR1 DNA MER1_type -80 894 732 6 893 1162 55 14 0 chr13 40410365 40410510 -79873802 + B1_Mus2 SINE Alu 1 147 0 6 893 229 222 0 0 chr13 40412193 40412238 -79872074 + (ATG)n Simple_repeat Simple_repeat 3 47 0 6 893 568 252 50 37 chr13 40412590 40412751 -79871561 + MTD LTR MaLR 257 419 0 6 893 799 290 83 21 chr13 40412751 40413230 -79871082 + L1M3 LINE L1 4280 4788 -1352 6 893 358 277 28 28 chr13 40413350 40413562 -79870750 + L1M3 LINE L1 5157 5368 -772 6 893 368 243 0 19 chr13 40413589 40413694 -79870618 + L1_Rod LINE L1 5501 5603 -244 6 893 1211 215 61 40 chr13 40413967 40414296 -79870016 - Lx7 LINE L1 -207 7489 7154 6 893 435 241 7 42 chr13 40414287 40414430 -79869882 + Lx7 LINE L1 7557 7694 -2 6 893 446 120 0 13 chr13 40414720 40414796 -79869516 + (CCCCCT)n Simple_repeat Simple_repeat 6 80 0 6 893 318 50 0 0 chr13 40414953 40414993 -79869319 + (TAA)n Simple_repeat Simple_repeat 3 42 0 6 893 225 0 0 0 chr13 40415240 40415265 -79869047 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 893 245 302 70 94 chr13 40416250 40416451 -79867861 + LTR84b LTR ERVL 157 352 -409 6 893 225 294 118 11 chr13 40416843 40416936 -79867376 - MIRb SINE MIR -113 155 53 6 893 189 0 0 0 chr13 40416967 40416988 -79867324 + (TGGGGG)n Simple_repeat Simple_repeat 6 26 0 6 893 323 245 108 0 chr13 40417254 40417356 -79866956 + PB1D10 SINE Alu 3 115 -2 6 893 531 0 0 0 chr13 40417521 40417580 -79866732 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 893 966 315 72 19 chr13 40417582 40418222 -79866090 - L1MA5 LINE L1 -31 6269 5596 6 893 331 193 0 24 chr13 40419519 40419604 -79864708 + GA-rich Low_complexity Low_complexity 6 88 0 6 893 5468 125 37 11 chr13 40419608 40420577 -79863735 + Lx4B LINE L1 2063 3056 -2821 6 893 5137 152 2 23 chr13 40420579 40420961 -79863351 + Lx4B LINE L1 4909 5281 -596 6 893 4769 70 0 3 chr13 40420961 40421575 -79862737 + L1Md_F2 LINE L1 5956 6567 -15 6 893 5195 182 79 24 chr13 40421575 40423229 -79861083 + Lx4B LINE L1 5282 7054 -4 6 893 473 228 0 0 chr13 40424878 40424970 -79859342 + RMER19C LTR ERVK 520 611 0 6 893 365 305 120 7 chr13 40425240 40425382 -79858930 - MER45A DNA Tip100 -1 177 20 6 893 423 0 0 0 chr13 40425422 40425469 -79858843 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 893 333 0 0 0 chr13 40425522 40425559 -79858753 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 893 324 312 49 59 chr13 40425599 40425803 -79858509 - L1ME3B LINE L1 -386 5854 5653 6 893 32 43 0 0 chr13 40426190 40426236 -79858076 + AT_rich Low_complexity Low_complexity 1 46 0 6 893 243 0 0 0 chr13 40428046 40428073 -79856239 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 893 958 273 80 15 chr13 40428846 40429110 -79855202 + MTD LTR MaLR 1 281 -138 6 893 32 75 0 0 chr13 40429120 40429187 -79855125 + AT_rich Low_complexity Low_complexity 1 67 0 6 893 490 277 62 77 chr13 40429847 40429946 -79854366 + L1_Mur2 LINE L1 4264 4363 -1517 6 893 450 0 0 0 chr13 40429946 40429996 -79854316 + (TAAAA)n Simple_repeat Simple_repeat 3 52 0 6 893 509 258 28 77 chr13 40429996 40430286 -79854026 + L1_Mur2 LINE L1 4364 4646 -1231 6 893 7092 92 19 3 chr13 40430384 40432096 -79852216 - L1VL2 LINE L1 -1585 2030 292 6 893 547 260 103 44 chr13 40432099 40432349 -79851963 + MTD LTR MaLR 61 415 -4 6 893 1842 205 40 21 chr13 40432588 40432967 -79851345 - ORR1B1 LTR MaLR -8 386 1 6 893 536 204 203 5 chr13 40433361 40433437 -79850875 + Lx9 LINE L1 7405 7481 -163 6 893 297 0 0 0 chr13 40433437 40433470 -79850842 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 893 536 204 203 5 chr13 40433470 40433585 -79850727 + Lx9 LINE L1 7482 7633 -11 6 893 186 43 0 0 chr13 40434258 40434281 -79850031 + (T)n Simple_repeat Simple_repeat 1 23 0 6 893 3167 70 0 0 chr13 40434318 40434730 -79849582 - L1Md_T LINE L1 0 6582 6171 6 893 434 120 71 12 chr13 40434774 40434858 -79849454 + ORR1D2 LTR MaLR 282 370 0 6 893 365 349 125 6 chr13 40434863 40435039 -79849273 + L1M5 LINE L1 5376 5572 -607 6 893 800 300 38 105 chr13 40435077 40435449 -79848863 - ORR1E LTR MaLR -6 353 7 6 893 309 51 0 0 chr13 40435449 40435488 -79848824 + (T)n Simple_repeat Simple_repeat 1 39 0 6 893 782 59 0 0 chr13 40435488 40435590 -79848722 - B1_Mus2 SINE Alu 0 147 46 6 893 355 222 49 115 chr13 40435493 40435615 -79848697 - B4 SINE B4 -71 221 108 6 893 237 221 33 154 chr13 40435538 40435629 -79848683 - RLTR25B LTR ERVK -531 497 418 6 893 299 265 15 0 chr13 40436010 40436078 -79848234 + ID4 SINE ID 5 73 -10 6 893 324 0 0 0 chr13 40436087 40436123 -79848189 + (A)n Simple_repeat Simple_repeat 1 36 0 6 893 360 64 0 0 chr13 40436831 40436878 -79847434 + (TAA)n Simple_repeat Simple_repeat 2 48 0 6 893 393 224 8 16 chr13 40437376 40437503 -79846809 + (TA)n Simple_repeat Simple_repeat 2 127 0 6 893 451 234 66 28 chr13 40437508 40437599 -79846713 + Lx9 LINE L1 7419 7517 -127 6 893 408 40 0 0 chr13 40437599 40437649 -79846663 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 893 451 234 66 28 chr13 40437649 40437768 -79846544 + Lx9 LINE L1 7518 7636 -8 6 893 851 291 136 9 chr13 40438208 40438641 -79845671 + MLT1E LTR MaLR 157 644 -9 6 893 627 278 59 22 chr13 40439047 40439259 -79845053 - MER20 DNA MER1_type -571 212 6 6 893 747 295 56 45 chr13 40439514 40439780 -79844532 + B4A SINE B4 24 292 0 6 893 567 43 0 0 chr13 40439885 40439955 -79844357 + (TAAAA)n Simple_repeat Simple_repeat 3 72 0 6 893 2384 98 6 0 chr13 40439970 40440295 -79844017 - ORR1A2 LTR MaLR 0 327 1 6 893 254 255 71 18 chr13 40440549 40440605 -79843707 + tRNA-Ala-GCY_ tRNA tRNA 17 75 0 6 893 3139 253 93 34 chr13 40441301 40441604 -79842708 + Lx6 LINE L1 6448 6741 -719 6 893 207 0 0 0 chr13 40441604 40441627 -79842685 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 893 3139 253 93 34 chr13 40441627 40442277 -79842035 + Lx6 LINE L1 6742 7458 -2 6 893 252 111 0 0 chr13 40442320 40442365 -79841947 + (A)n Simple_repeat Simple_repeat 1 45 0 6 893 378 0 0 0 chr13 40442704 40442746 -79841566 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 893 363 44 0 0 chr13 40443410 40443455 -79840857 + (A)n Simple_repeat Simple_repeat 1 45 0 6 893 583 241 11 50 chr13 40444552 40444731 -79839581 + B3A SINE B2 27 198 0 6 893 24 32 0 0 chr13 40444731 40444762 -79839550 + AT_rich Low_complexity Low_complexity 1 31 0 6 893 324 250 91 41 chr13 40444778 40444899 -79839413 + RSINE1 SINE B4 10 136 -29 6 893 318 294 29 10 chr13 40446167 40446270 -79838042 + MER5A DNA MER1_type 3 107 -82 6 893 243 0 0 0 chr13 40446270 40446297 -79838015 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 893 627 14 0 0 chr13 40446765 40446837 -79837475 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 6 893 335 320 89 25 chr13 40447033 40447235 -79837077 + MIR SINE MIR 1 215 -47 6 893 1265 164 27 9 chr13 40447555 40447776 -79836536 + URR1B DNA MER1_type 1 225 0 6 893 268 269 25 13 chr13 40447813 40447892 -79836420 + ID4_ SINE ID 4 83 0 6 893 750 188 0 0 chr13 40448121 40448249 -79836063 + B1_Mus1 SINE Alu 1 128 -20 6 893 238 208 21 0 chr13 40448260 40448308 -79836004 + GA-rich Low_complexity Low_complexity 2 50 0 6 893 465 324 15 0 chr13 40448319 40448455 -79835857 + RSINE1 SINE B4 16 153 -12 6 893 21 0 0 0 chr13 40448455 40448476 -79835836 + AT_rich Low_complexity Low_complexity 1 21 0 6 893 1737 44 4 0 chr13 40449196 40449422 -79834890 + MTB LTR MaLR 174 400 0 6 893 243 0 0 0 chr13 40449544 40449571 -79834741 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 893 867 231 15 0 chr13 40449587 40449790 -79834522 + B3 SINE B2 1 206 -10 6 893 446 322 22 60 chr13 40450570 40450755 -79833557 + MIRb SINE MIR 50 227 -35 6 893 432 0 0 0 chr13 40451178 40451226 -79833086 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 893 599 317 9 69 chr13 40451319 40451536 -79832776 - B4 SINE B4 -18 274 71 6 893 1023 272 78 38 chr13 40451545 40451916 -79832396 - MTD LTR MaLR -15 404 19 6 893 2036 279 42 50 chr13 40452606 40453454 -79830858 + Lx8 LINE L1 6058 6938 -706 7 893 366 23 0 0 chr13 40453586 40453629 -79830683 + (TGAG)n Simple_repeat Simple_repeat 4 46 0 7 893 518 217 120 6 chr13 40453810 40453977 -79830335 + L1MA8 LINE L1 6013 6198 -93 7 893 270 250 14 14 chr13 40454045 40454118 -79830194 - MTEb LTR MaLR -20 359 287 7 893 830 230 28 0 chr13 40455210 40455388 -79828924 + B3 SINE B2 20 202 -14 7 893 2021 251 90 105 chr13 40455430 40456404 -79827908 - RMER17B LTR ERVK -3 857 1 7 893 240 86 0 0 chr13 40456490 40456525 -79827787 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 893 1584 195 15 3 chr13 40456696 40457025 -79827287 + RLTR30 LTR ERV1 46 378 -1 7 893 206 218 0 35 chr13 40457389 40457446 -79826866 + A-rich Low_complexity Low_complexity 2 56 0 7 893 7957 75 19 1 chr13 40457514 40458602 -79825710 - L1_Mus3 LINE L1 0 6638 5532 7 893 311 96 19 0 chr13 40459612 40459664 -79824648 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 893 266 125 0 20 chr13 40459702 40459751 -79824561 + (TA)n Simple_repeat Simple_repeat 2 49 0 7 893 266 233 41 0 chr13 40459928 40460001 -79824311 + (TG)n Simple_repeat Simple_repeat 1 76 0 7 893 458 204 0 9 chr13 40460054 40460168 -79824144 + (TA)n Simple_repeat Simple_repeat 2 114 0 7 893 232 222 0 0 chr13 40460987 40461032 -79823280 - RMER30 DNA MER1_type -151 51 7 7 893 639 0 0 0 chr13 40462561 40462632 -79821680 + (TC)n Simple_repeat Simple_repeat 1 71 0 7 893 450 0 0 0 chr13 40462878 40462928 -79821384 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 893 204 182 0 0 chr13 40464319 40464363 -79819949 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 893 925 309 14 10 chr13 40464368 40464656 -79819656 - B4A SINE B4 -2 290 2 7 893 527 209 78 21 chr13 40464975 40465117 -79819195 + MTD LTR MaLR 1 150 -269 7 893 912 263 116 31 chr13 40465377 40465695 -79818617 + MTE2b LTR MaLR 29 373 -6 7 893 5147 149 72 6 chr13 40466853 40467699 -79816613 - RMER19B LTR ERVK 0 902 1 7 893 999 287 135 44 chr13 40467737 40468519 -79815793 - Lx9 LINE L1 -1736 5908 5051 7 893 1154 68 0 0 chr13 40468736 40468882 -79815430 + B1_Mus2 SINE Alu 2 147 0 7 893 203 146 0 18 chr13 40468882 40468938 -79815374 + A-rich Low_complexity Low_complexity 5 59 0 7 893 356 244 98 8 chr13 40468960 40469092 -79815220 + MER63D DNA AcHobo 97 240 -821 7 893 254 261 0 44 chr13 40469135 40469203 -79815109 + ID4_ SINE ID 8 72 -11 7 893 212 86 0 28 chr13 40469237 40469273 -79815039 + (GGAGA)n Simple_repeat Simple_repeat 4 38 0 7 893 237 65 0 0 chr13 40469656 40469687 -79814625 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 7 893 310 115 58 0 chr13 40471215 40471267 -79813045 - RMER10B LTR ERVL -1 397 343 7 893 576 29 0 0 chr13 40471286 40471356 -79812956 + (GA)n Simple_repeat Simple_repeat 2 71 0 7 893 1527 291 61 33 chr13 40471407 40472082 -79812230 - Charlie5 DNA MER1_type -393 2231 1538 7 893 624 300 96 52 chr13 40472183 40472454 -79811858 - Lx8 LINE L1 -237 7236 6954 7 893 370 236 0 27 chr13 40472495 40472569 -79811743 + ID4 SINE ID 2 73 -10 7 893 396 0 0 0 chr13 40472580 40472624 -79811688 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 893 253 225 24 24 chr13 40472627 40472709 -79811603 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 7 893 593 314 73 15 chr13 40472752 40473082 -79811230 - Charlie5 DNA MER1_type -1719 905 557 7 893 228 295 126 0 chr13 40473267 40473362 -79810950 - Charlie5 DNA MER1_type -2238 386 280 7 893 330 194 0 0 chr13 40475005 40475072 -79809240 + (TATATG)n Simple_repeat Simple_repeat 6 72 0 7 893 4916 192 68 2 chr13 40475074 40476007 -79808305 + Lx9 LINE L1 6301 7294 -350 7 893 813 49 0 0 chr13 40476007 40476109 -79808203 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 7 893 503 168 75 8 chr13 40476152 40476272 -79808040 + Lx9 LINE L1 7516 7643 -1 7 893 180 111 0 0 chr13 40477728 40477755 -79806557 + (T)n Simple_repeat Simple_repeat 1 27 0 7 893 1182 68 0 0 chr13 40477952 40478099 -79806213 - B1_Mus2 SINE Alu 0 147 1 7 893 324 0 0 0 chr13 40478677 40478713 -79805599 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 7 893 28 0 0 0 chr13 40479593 40479621 -79804691 + AT_rich Low_complexity Low_complexity 1 28 0 7 893 336 48 0 0 chr13 40480829 40480871 -79803441 + (CTTG)n Simple_repeat Simple_repeat 2 43 0 7 893 476 223 19 14 chr13 40481390 40481613 -79802699 + CT-rich Low_complexity Low_complexity 1 224 0 7 893 240 265 25 17 chr13 40481584 40481703 -79802609 + C-rich Low_complexity Low_complexity 5 124 0 7 893 245 280 13 26 chr13 40481707 40481784 -79802528 + CT-rich Low_complexity Low_complexity 3 78 0 7 893 206 128 26 0 chr13 40481795 40481834 -79802478 + CT-rich Low_complexity Low_complexity 2 41 0 7 893 342 0 0 0 chr13 40482207 40482245 -79802067 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 7 893 294 125 0 0 chr13 40483986 40484034 -79800278 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 893 782 296 39 53 chr13 40484047 40484332 -79799980 - B4A SINE B4 -11 281 1 7 893 437 0 19 0 chr13 40484888 40484941 -79799371 + (TTTTG)n Simple_repeat Simple_repeat 4 57 0 7 893 275 258 124 0 chr13 40484943 40485032 -79799280 - PB1D10 SINE Alu -13 104 5 7 893 397 233 12 0 chr13 40485506 40485592 -79798720 - PB1D10 SINE Alu -8 109 23 7 893 487 232 14 101 chr13 40485729 40485868 -79798444 + B4A SINE B4 166 292 0 7 893 207 204 0 0 chr13 40485868 40485917 -79798395 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 893 234 310 163 100 chr13 40486839 40487090 -79797222 + B4 SINE B4 24 290 -2 7 893 198 0 0 0 chr13 40487116 40487138 -79797174 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 893 513 0 0 0 chr13 40487138 40487194 -79797118 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 893 421 277 0 8 chr13 40487345 40487465 -79796847 + PB1D9 SINE Alu 1 119 -1 7 893 26 30 0 0 chr13 40487479 40487512 -79796800 + AT_rich Low_complexity Low_complexity 1 33 0 7 893 217 286 11 67 chr13 40487645 40487735 -79796577 - MIR SINE MIR -63 199 115 7 893 306 305 10 10 chr13 40487899 40487995 -79796317 + MIRb SINE MIR 71 166 -102 7 893 236 316 91 35 chr13 40488691 40488888 -79795424 - MLT1A1 LTR MaLR -157 251 44 7 893 25 0 0 0 chr13 40489572 40489597 -79794715 + AT_rich Low_complexity Low_complexity 1 25 0 7 893 333 279 7 17 chr13 40490072 40490222 -79794090 - L1MD3 LINE L1 -12 7983 7734 7 893 878 302 10 48 chr13 40490222 40490511 -79793801 + B4 SINE B4 3 280 -12 7 893 309 346 94 13 chr13 40490798 40491032 -79793280 - L1MD3 LINE L1 -419 7576 7324 7 893 204 40 0 0 chr13 40491061 40491086 -79793226 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 893 654 13 0 0 chr13 40492169 40492244 -79792068 + (TG)n Simple_repeat Simple_repeat 2 76 0 7 893 274 147 26 26 chr13 40492297 40492374 -79791938 + (CAGAGA)n Simple_repeat Simple_repeat 4 80 0 7 893 1343 145 18 18 chr13 40492518 40492743 -79791569 - URR1B DNA MER1_type 0 225 1 7 893 218 140 0 39 chr13 40492968 40492998 -79791314 + polypyrimidine Low_complexity Low_complexity 25 52 0 7 893 1308 79 0 0 chr13 40492998 40493176 -79791136 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 7 893 218 140 0 39 chr13 40493176 40493197 -79791115 + polypyrimidine Low_complexity Low_complexity 4 24 0 7 893 900 192 0 32 chr13 40493197 40493551 -79790761 + CT-rich Low_complexity Low_complexity 1 342 0 7 893 206 209 32 32 chr13 40493600 40493694 -79790618 + CT-rich Low_complexity Low_complexity 1 94 0 7 893 258 345 96 17 chr13 40494204 40494319 -79789993 + PB1 SINE Alu 2 125 -2 7 893 3684 148 31 19 chr13 40494319 40495080 -79789232 - Lx5 LINE L1 -798 6252 5469 7 893 4418 171 29 20 chr13 40495080 40495518 -79788794 + Lx5 LINE L1 6258 6714 -336 7 893 1740 131 40 98 chr13 40495518 40495865 -79788447 + ORR1A2 LTR MaLR 1 327 0 7 893 4418 171 29 20 chr13 40495865 40496212 -79788100 + Lx5 LINE L1 6715 7050 0 7 893 322 282 0 33 chr13 40496474 40496595 -79787717 + RMER15 LTR ERVL 305 421 -154 7 893 352 314 65 17 chr13 40496719 40496949 -79787363 - L1MB3 LINE L1 -107 6076 5836 7 893 237 241 0 0 chr13 40497078 40497132 -79787180 + ID4 SINE ID 20 73 -10 7 893 306 0 0 0 chr13 40497132 40497166 -79787146 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 893 693 171 0 0 chr13 40497235 40497381 -79786931 + (CA)n Simple_repeat Simple_repeat 2 147 0 7 893 285 29 0 0 chr13 40497840 40497874 -79786438 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 893 414 296 123 40 chr13 40498637 40498929 -79785383 + ORR1E LTR MaLR 43 379 0 7 893 186 133 0 0 chr13 40499372 40499402 -79784910 + (A)n Simple_repeat Simple_repeat 1 30 0 7 893 429 71 0 0 chr13 40499931 40500000 -79784312 - L1_Mus2 LINE L1 -1 6581 6510 7 893 1924 73 8 19 chr13 40500000 40500265 -79784047 - L1_Mus1 LINE L1 -57 6510 6249 1 893 1096 41 0 14 chr13 40500268 40500415 -79783897 - L1Md_F2 LINE L1 -12 6570 6426 2 893 395 202 10 0 chr13 40500896 40501000 -79783312 + (CA)n Simple_repeat Simple_repeat 1 105 0 3 893 232 296 10 0 chr13 40501062 40501160 -79783152 + (CA)n Simple_repeat Simple_repeat 1 99 0 3 111 387 148 0 0 chr13 40501164 40501252 -79783060 + (TC)n Simple_repeat Simple_repeat 1 88 0 4 894 967 241 0 5 chr13 40501900 40502096 -79782216 - B3 SINE B2 -17 199 5 5 894 385 238 0 12 chr13 40502687 40502768 -79781544 + ID4 SINE ID 2 81 -2 6 894 1683 281 164 50 chr13 40503327 40504653 -79779659 + L1MB3 LINE L1 40 1516 -4868 7 894 1289 297 132 17 chr13 40505057 40505888 -79778424 + L1MB3 LINE L1 4267 5193 -1183 7 894 650 247 79 44 chr13 40505942 40506219 -79778093 - MTD LTR MaLR -14 386 108 8 894 4225 69 5 4 chr13 40506220 40506771 -79777541 + L1Md_F2 LINE L1 6031 6582 0 9 894 351 234 413 30 chr13 40506796 40507101 -79777211 + L1MB3 LINE L1 5718 6139 -280 7 894 485 234 0 18 chr13 40507320 40507433 -79776879 - MTD LTR MaLR -299 120 10 1 894 432 281 101 51 chr13 40507436 40508017 -79776295 + L1MB3 LINE L1 4963 5569 -611 1 894 264 337 82 39 chr13 40508047 40508254 -79776058 + B4A SINE B4 3 218 -74 1 894 794 299 68 22 chr13 40508333 40508777 -79775535 + L1MB3 LINE L1 5711 6174 -9 1 894 386 302 29 76 chr13 40509309 40509481 -79774831 + B4A SINE B4 3 166 -126 1 894 337 186 0 40 chr13 40509646 40509747 -79774565 + (CAT)n Simple_repeat Simple_repeat 1 97 0 1 894 29 60 0 0 chr13 40509979 40510029 -79774283 + AT_rich Low_complexity Low_complexity 1 50 0 1 894 279 268 10 58 chr13 40511088 40511191 -79773121 - MLT1A1 LTR MaLR 0 408 311 1 894 228 281 31 0 chr13 40511729 40511793 -79772519 + MLT1F1 LTR MaLR 36 101 -468 1 894 738 282 60 30 chr13 40513554 40513821 -79770491 + B4 SINE B4 3 277 -15 1 894 1001 58 0 0 chr13 40514267 40514404 -79769908 - B1_Mus1 SINE Alu 0 148 12 1 894 259 225 0 59 chr13 40515433 40515518 -79768794 + A-rich Low_complexity Low_complexity 1 80 0 2 894 515 240 16 31 chr13 40515688 40515817 -79768495 - RSINE1 SINE B4 -36 129 3 2 894 2361 53 0 3 chr13 40516276 40516561 -79767751 + L1Md_F2 LINE L1 5303 5586 -297 2 894 7748 72 7 2 chr13 40516562 40517540 -79766772 + L1Md_F2 LINE L1 5588 6570 -12 2 894 746 180 85 18 chr13 40517606 40517770 -79766542 + B3 SINE B2 42 216 0 2 894 471 210 16 39 chr13 40518152 40518281 -79766031 - Lx7 LINE L1 0 7696 7571 2 894 204 125 0 0 chr13 40518290 40518322 -79765990 + (TAG)n Simple_repeat Simple_repeat 1 32 0 2 894 770 290 45 31 chr13 40518807 40519095 -79765217 + B4A SINE B4 1 292 0 2 894 1883 149 3 63 chr13 40519159 40519509 -79764803 - ORR1A4 LTR MaLR 0 329 1 2 894 249 33 0 0 chr13 40519724 40519754 -79764558 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 894 23 0 0 0 chr13 40520068 40520091 -79764221 + AT_rich Low_complexity Low_complexity 1 23 0 2 894 238 286 36 0 chr13 40520110 40520166 -79764146 - tRNA-Ala-GCA tRNA tRNA -10 65 8 3 894 1138 241 51 48 chr13 40520245 40520598 -79763714 - ORR1E LTR MaLR -1 358 5 3 894 324 0 0 0 chr13 40520674 40520710 -79763602 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 894 629 243 152 0 chr13 40521067 40521244 -79763068 - B3 SINE B2 -10 206 3 3 894 1045 178 67 5 chr13 40521393 40521602 -79762710 - URR1B DNA MER1_type -2 223 2 3 894 280 257 174 28 chr13 40522280 40522424 -79761888 + LTR48 LTR ERV1 3 167 -620 3 894 711 0 0 0 chr13 40523372 40523451 -79760861 + (TC)n Simple_repeat Simple_repeat 1 79 0 3 894 777 255 52 37 chr13 40523631 40523851 -79760461 + B4A SINE B4 4 227 -65 3 894 207 0 0 0 chr13 40523851 40523874 -79760438 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 3 894 777 255 52 37 chr13 40523874 40523922 -79760390 + B4A SINE B4 228 276 -16 3 894 205 306 14 50 chr13 40523939 40524080 -79760232 + (CATATA)n Simple_repeat Simple_repeat 5 140 0 3 894 403 283 41 57 chr13 40524235 40524550 -79759762 + MER31-int LTR ERV1 292 601 -4335 4 894 195 42 0 0 chr13 40525100 40525124 -79759188 + (GGAGA)n Simple_repeat Simple_repeat 3 26 0 4 894 199 234 26 0 chr13 40525695 40525772 -79758540 + GA-rich Low_complexity Low_complexity 1 79 0 4 894 186 204 20 20 chr13 40525775 40525825 -79758487 - MIRc SINE MIR -134 134 85 4 894 1319 230 174 28 chr13 40526411 40526841 -79757471 + MTD-int LTR MaLR 766 1258 0 4 894 1694 215 60 5 chr13 40526841 40527238 -79757074 + MTD LTR MaLR 1 419 0 4 894 273 243 136 136 chr13 40528211 40528237 -79756075 - B2_Mm2 SINE B2 -17 178 158 4 894 282 95 0 0 chr13 40528237 40528279 -79756033 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 894 477 243 136 136 chr13 40528279 40528428 -79755884 - B3A SINE B2 -38 157 3 4 894 22 0 0 0 chr13 40529296 40529318 -79754994 + AT_rich Low_complexity Low_complexity 1 22 0 4 894 23 33 0 0 chr13 40529743 40529773 -79754539 + AT_rich Low_complexity Low_complexity 1 30 0 4 894 1246 168 22 54 chr13 40529774 40530051 -79754261 + MTC LTR MaLR 154 421 0 4 894 739 134 8 51 chr13 40530147 40530307 -79754005 - RMER1B Other Other -14 1052 916 5 894 915 267 32 76 chr13 40530388 40530729 -79753583 - RMER1B Other Other -738 328 3 5 894 623 261 1 12 chr13 40530735 40530918 -79753394 - MTE2b LTR MaLR -203 176 2 5 894 849 20 0 0 chr13 40531189 40531288 -79753024 + (TCTCC)n Simple_repeat Simple_repeat 4 102 0 5 894 405 0 0 0 chr13 40531870 40531915 -79752397 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 5 894 800 315 29 11 chr13 40532243 40532522 -79751790 + B4 SINE B4 8 291 -1 5 894 438 20 0 0 chr13 40533323 40533374 -79750938 + (CCA)n Simple_repeat Simple_repeat 2 52 0 5 894 302 312 78 36 chr13 40533637 40533803 -79750509 - MLT1A0 LTR MaLR -23 342 170 5 894 459 0 0 0 chr13 40534654 40534705 -79749607 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 894 40 0 0 0 chr13 40535333 40535373 -79748939 + AT_rich Low_complexity Low_complexity 1 40 0 5 894 878 131 18 6 chr13 40535383 40535552 -79748760 + GA-rich Low_complexity Low_complexity 2 172 0 6 894 954 107 12 6 chr13 40535584 40535744 -79748568 + (GAA)n Simple_repeat Simple_repeat 3 163 0 6 894 294 137 0 0 chr13 40535755 40535775 -79748537 + (GAA)n Simple_repeat Simple_repeat 1 20 0 6 894 1473 39 0 0 chr13 40535775 40535955 -79748357 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 894 294 137 0 0 chr13 40535955 40535985 -79748327 + (GAA)n Simple_repeat Simple_repeat 3 32 0 6 894 489 58 0 0 chr13 40536976 40537045 -79747267 + (TTTTG)n Simple_repeat Simple_repeat 1 69 0 6 894 252 0 0 0 chr13 40537315 40537343 -79746969 + (A)n Simple_repeat Simple_repeat 1 28 0 6 894 1568 249 75 25 chr13 40537376 40537866 -79746446 + RLTR20B1 LTR ERVK 49 563 0 6 894 281 367 0 39 chr13 40537898 40538000 -79746312 + PB1D10 SINE Alu 10 107 -10 6 894 464 277 2 8 chr13 40538248 40538366 -79745946 + PB1D7 SINE Alu 3 114 -34 6 894 846 290 41 14 chr13 40538487 40538777 -79745535 - MLT1A0 LTR MaLR -67 298 1 6 894 496 379 143 30 chr13 40538783 40539286 -79745026 - MLT1A0-int LTR MaLR -6 1729 1170 6 894 1219 301 88 49 chr13 40539558 40540229 -79744083 - MLT1A0-int LTR MaLR -960 775 79 6 894 322 258 99 23 chr13 40540336 40540467 -79743845 - MLT1A0 LTR MaLR -83 282 142 7 894 494 249 0 12 chr13 40540505 40540668 -79743644 + (TATG)n Simple_repeat Simple_repeat 3 163 0 7 894 241 195 0 0 chr13 40540674 40540715 -79743597 + (TA)n Simple_repeat Simple_repeat 2 42 0 7 894 483 280 34 0 chr13 40540727 40540845 -79743467 - RSINE1 SINE B4 0 165 44 7 894 578 237 19 25 chr13 40540868 40541028 -79743284 - MLT1A0 LTR MaLR -206 159 1 7 894 307 254 0 0 chr13 40541409 40541476 -79742836 - ID4_ SINE ID -5 78 12 7 894 21 36 0 0 chr13 40541952 40541980 -79742332 + AT_rich Low_complexity Low_complexity 1 28 0 7 894 234 189 19 0 chr13 40542172 40542225 -79742087 + Lx8 LINE L1 7416 7469 -4 7 894 288 0 0 0 chr13 40542400 40542432 -79741880 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 894 963 269 5 0 chr13 40542432 40542644 -79741668 + ID_B1 SINE B4 11 223 -1 7 894 216 282 11 45 chr13 40543237 40543326 -79740986 + G-rich Low_complexity Low_complexity 5 90 0 7 894 732 285 43 0 chr13 40543613 40543820 -79740492 + B3 SINE B2 1 216 0 8 894 361 327 56 99 chr13 40543858 40544231 -79740081 + ORR1E LTR MaLR 3 359 0 8 894 919 241 30 69 chr13 40545424 40545727 -79738585 + B4A SINE B4 2 292 0 8 894 202 121 76 0 chr13 40545727 40545793 -79738519 + (CA)n Simple_repeat Simple_repeat 1 71 0 8 894 279 54 0 0 chr13 40545789 40545826 -79738486 + (CCA)n Simple_repeat Simple_repeat 3 39 0 8 894 453 132 41 8 chr13 40545857 40545979 -79738333 + (CA)n Simple_repeat Simple_repeat 2 127 0 8 894 285 98 0 0 chr13 40546335 40546376 -79737936 + (TCCCC)n Simple_repeat Simple_repeat 1 41 0 8 894 319 181 73 46 chr13 40546376 40546474 -79737838 - MIR3 SINE MIR -93 183 82 8 894 241 250 125 0 chr13 40546958 40547022 -79737290 + ID4 SINE ID 10 81 -2 8 894 503 287 15 60 chr13 40547474 40547674 -79736638 + B4 SINE B4 2 192 -100 8 894 182 233 17 0 chr13 40547674 40547734 -79736578 + (CA)n Simple_repeat Simple_repeat 1 61 0 9 894 371 214 68 26 chr13 40547802 40547927 -79736385 - MIR SINE MIR -51 217 86 9 894 288 0 0 0 chr13 40549224 40549256 -79735056 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 894 23 0 0 0 chr13 40549510 40549533 -79734779 + AT_rich Low_complexity Low_complexity 1 23 0 9 894 23 0 0 0 chr13 40549907 40549930 -79734382 + AT_rich Low_complexity Low_complexity 1 23 0 9 894 946 257 5 0 chr13 40549934 40550140 -79734172 - B3 SINE B2 -5 211 5 9 894 180 152 0 0 chr13 40550277 40550310 -79734002 + (TAGG)n Simple_repeat Simple_repeat 4 36 0 9 894 22 35 0 0 chr13 40550356 40550385 -79733927 + AT_rich Low_complexity Low_complexity 1 29 0 9 894 2897 86 2 49 chr13 40551532 40551959 -79732353 - MTB_Mm LTR MaLR 0 407 1 9 894 4190 145 131 12 chr13 40551959 40552846 -79731466 - MTB_Mm-int LTR MaLR 0 1258 267 9 894 583 297 0 7 chr13 40554336 40554485 -79729827 + ID_B1 SINE B4 76 223 -1 9 894 328 197 0 53 chr13 40554749 40554824 -79729488 - ID_B1 SINE B4 -5 219 149 1 894 709 256 217 21 chr13 40554828 40555114 -79729198 + ORR1E LTR MaLR 15 354 -20 1 894 1396 208 93 19 chr13 40555669 40556046 -79728266 - MTD LTR MaLR -14 405 1 1 894 782 331 7 25 chr13 40556297 40556573 -79727739 + B4A SINE B4 2 272 -20 1 894 357 208 0 0 chr13 40557524 40557601 -79726711 + A-rich Low_complexity Low_complexity 1 77 0 1 894 345 159 0 0 chr13 40557762 40557825 -79726487 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 894 684 80 0 0 chr13 40558929 40559029 -79725283 + (GA)n Simple_repeat Simple_repeat 1 100 0 1 894 222 287 81 0 chr13 40559246 40559268 -79725044 - ID_B1 SINE B4 -128 96 3 1 894 282 245 0 0 chr13 40559268 40559333 -79724979 - ID4_ SINE ID -16 67 3 1 894 267 203 31 15 chr13 40559369 40559434 -79724878 + B1F SINE Alu 25 90 -59 1 894 239 267 17 0 chr13 40559477 40559537 -79724775 + ID SINE ID 1 61 -163 1 894 645 185 8 8 chr13 40560106 40560226 -79724086 + B1_Mur4 SINE Alu 2 121 -29 1 894 25 0 0 0 chr13 40560509 40560534 -79723778 + AT_rich Low_complexity Low_complexity 1 25 0 1 894 180 0 0 0 chr13 40560666 40560686 -79723626 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 894 1016 242 5 27 chr13 40560709 40560930 -79723382 - B3 SINE B2 0 216 1 1 894 461 231 156 7 chr13 40561105 40561240 -79723072 + RSINE1 SINE B4 3 157 -8 1 894 1439 144 101 49 chr13 40561462 40561768 -79722544 + Lx LINE L1 6333 6654 0 1 894 261 0 0 0 chr13 40561814 40561843 -79722469 + (GGA)n Simple_repeat Simple_repeat 3 31 0 1 894 508 285 0 0 chr13 40562341 40562471 -79721841 + Lx6 LINE L1 6234 6363 -687 1 894 1657 272 85 17 chr13 40562474 40563037 -79721275 + Lx6 LINE L1 6483 7460 0 1 894 332 120 49 20 chr13 40563833 40563935 -79720377 + (TA)n Simple_repeat Simple_repeat 1 105 0 1 894 846 163 11 11 chr13 40563943 40564123 -79720189 + CT-rich Low_complexity Low_complexity 1 180 0 1 894 828 142 43 0 chr13 40564136 40564277 -79720035 - B1_Mus1 SINE Alu 0 148 2 1 894 244 195 204 11 chr13 40564452 40564540 -79719772 - B1F SINE Alu -9 140 36 1 894 835 266 19 0 chr13 40565091 40565298 -79719014 + B4A SINE B4 1 211 -81 1 894 366 80 0 0 chr13 40565478 40565528 -79718784 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 894 366 301 6 140 chr13 40565762 40565940 -79718372 + MIR SINE MIR 42 195 -67 1 894 285 254 30 0 chr13 40566750 40566817 -79717495 + ID4_ SINE ID 12 80 -3 1 894 402 21 0 0 chr13 40567236 40567283 -79717029 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 894 690 281 10 35 chr13 40567667 40567870 -79716442 - B3A SINE B2 0 198 1 1 894 802 261 48 36 chr13 40568484 40568734 -79715578 + ORR1E LTR MaLR 3 255 -104 1 894 1060 252 116 48 chr13 40568745 40569082 -79715230 + ORR1D2 LTR MaLR 1 360 -10 1 894 271 236 43 53 chr13 40569087 40569181 -79715131 + ORR1E LTR MaLR 283 375 -4 1 894 219 114 0 0 chr13 40569219 40569254 -79715058 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 894 636 298 95 11 chr13 40569335 40569620 -79714692 + MER2 DNA MER2_type 9 317 -28 1 894 371 331 58 0 chr13 40570122 40570276 -79714036 + RSINE1 SINE B4 1 163 -2 1 894 1303 102 0 36 chr13 40570502 40570696 -79713616 + B2_Mm2 SINE B2 1 187 -8 1 894 261 190 17 17 chr13 40571067 40571126 -79713186 + MLT1A1 LTR MaLR 25 83 -325 1 894 572 97 0 11 chr13 40571253 40571347 -79712965 + (CA)n Simple_repeat Simple_repeat 2 94 0 1 894 396 0 0 0 chr13 40571554 40571598 -79712714 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 894 2265 144 44 0 chr13 40572022 40572384 -79711928 + ORR1C1 LTR MaLR 1 378 0 1 894 495 0 0 0 chr13 40572385 40572440 -79711872 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 894 1054 256 131 98 chr13 40573542 40573592 -79710720 + L1MA7 LINE L1 5606 5655 -636 1 894 1095 172 79 23 chr13 40573592 40573806 -79710506 + URR1A DNA MER1_type 1 226 0 1 894 1054 256 131 98 chr13 40573806 40574417 -79709895 + L1MA7 LINE L1 5656 6289 -2 1 894 304 235 94 0 chr13 40574420 40574505 -79709807 + PB1D10 SINE Alu 1 93 -24 1 894 483 192 32 24 chr13 40574432 40574555 -79709757 + ID_B1 SINE B4 101 224 0 1 894 320 0 25 0 chr13 40574813 40574853 -79709459 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 894 306 0 0 0 chr13 40575042 40575076 -79709236 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 894 25 31 0 0 chr13 40575965 40575997 -79708315 + AT_rich Low_complexity Low_complexity 1 32 0 1 894 606 28 0 0 chr13 40576909 40576981 -79707331 + (TAGA)n Simple_repeat Simple_repeat 3 74 0 1 894 519 17 0 0 chr13 40577057 40577117 -79707195 + (TAGA)n Simple_repeat Simple_repeat 3 62 0 1 894 1026 24 0 0 chr13 40577513 40577638 -79706674 + (TG)n Simple_repeat Simple_repeat 2 126 0 1 894 329 154 46 0 chr13 40577699 40577764 -79706548 - B3A SINE B2 -130 68 1 1 894 451 358 7 13 chr13 40577816 40577969 -79706343 + RSINE1 SINE B4 4 155 -10 1 894 210 191 0 0 chr13 40577990 40578032 -79706280 + (TGG)n Simple_repeat Simple_repeat 3 44 0 1 894 1318 207 23 50 chr13 40578135 40578435 -79705877 + B4A SINE B4 1 292 0 1 894 342 250 0 0 chr13 40578435 40578539 -79705773 + (CA)n Simple_repeat Simple_repeat 1 104 0 1 894 2012 88 6 99 chr13 40579388 40579740 -79704572 + ORR1A2 LTR MaLR 1 319 -8 1 894 208 274 0 0 chr13 40580554 40580605 -79703707 - MIRb SINE MIR -8 260 210 1 894 263 268 0 14 chr13 40581139 40581211 -79703101 + L1M7 LINE L1 217 287 -5931 1 894 315 266 67 58 chr13 40581254 40581345 -79702967 + RSINE1 SINE B4 43 126 -39 1 894 189 0 0 0 chr13 40581345 40581366 -79702946 + (TA)n Simple_repeat Simple_repeat 1 21 0 1 894 315 266 67 58 chr13 40581366 40581394 -79702918 + RSINE1 SINE B4 127 162 -3 1 894 576 323 133 56 chr13 40581442 40581924 -79702388 - MLT1F2 LTR MaLR -1 559 41 1 894 741 223 6 48 chr13 40582976 40583141 -79701171 + RSINE1 SINE B4 8 165 0 1 894 288 154 0 0 chr13 40583141 40583193 -79701119 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 894 180 0 0 0 chr13 40583687 40583707 -79700605 + (A)n Simple_repeat Simple_repeat 1 20 0 1 894 287 264 53 75 chr13 40584502 40584675 -79699637 - B3A SINE B2 -1 197 13 1 894 2443 92 3 0 chr13 40584817 40585143 -79699169 + ORR1A2 LTR MaLR 1 327 0 1 894 369 0 0 0 chr13 40587644 40587685 -79696627 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 894 259 264 0 33 chr13 40588569 40588659 -79695653 + CT-rich Low_complexity Low_complexity 5 91 0 1 894 1211 55 0 0 chr13 40588934 40589080 -79695232 + B1_Mus2 SINE Alu 2 147 0 1 894 402 218 3 28 chr13 40589590 40589702 -79694610 - B1F SINE Alu -7 142 1 1 894 348 246 45 18 chr13 40589703 40589815 -79694497 + L1MD LINE L1 5703 5817 -2178 1 894 275 236 0 0 chr13 40589837 40589892 -79694420 + ID SINE ID 5 59 -165 1 894 300 284 311 0 chr13 40589951 40590178 -79694134 + RMER15 LTR ERVL 276 572 -3 1 894 302 257 29 10 chr13 40590229 40590331 -79693981 + L1MC1 LINE L1 6108 6211 -122 1 894 444 200 92 83 chr13 40590704 40590813 -79693499 + Lx8 LINE L1 7037 7146 -327 1 894 383 288 39 50 chr13 40591314 40591493 -79692819 + B2_Mm2 SINE B2 1 177 -18 1 894 1637 283 106 37 chr13 40594034 40594688 -79689624 - Lx8 LINE L1 -251 7222 6524 1 894 265 326 11 0 chr13 40594653 40594748 -79689564 + Lx8 LINE L1 7237 7332 -141 1 894 1358 209 120 20 chr13 40595080 40595240 -79689072 + ORR1C2 LTR MaLR 1 171 -213 1 894 576 0 0 0 chr13 40595240 40595304 -79689008 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 894 1358 209 120 20 chr13 40595304 40595485 -79688827 + ORR1C2 LTR MaLR 172 374 -10 1 894 510 17 0 0 chr13 40595508 40595567 -79688745 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 894 273 57 0 0 chr13 40595567 40595601 -79688711 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 894 613 281 46 88 chr13 40595621 40595833 -79688479 - B4A SINE B4 0 292 81 1 894 1011 215 9 18 chr13 40595833 40596051 -79688261 - B3 SINE B2 0 216 1 1 894 613 281 46 88 chr13 40596051 40596143 -79688169 - B4A SINE B4 -212 80 1 1 894 206 154 26 0 chr13 40596335 40596374 -79687938 + (TTG)n Simple_repeat Simple_repeat 3 42 0 1 894 206 0 0 65 chr13 40596547 40596578 -79687734 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 894 229 273 85 65 chr13 40596636 40596789 -79687523 + L1M6 LINE L1 1609 1764 -4732 1 894 921 188 7 0 chr13 40597522 40597671 -79686641 + B1_Mur4 SINE Alu 1 150 0 1 894 327 258 26 0 chr13 40597671 40597817 -79686495 + GA-rich Low_complexity Low_complexity 3 152 0 1 894 1201 75 6 6 chr13 40597817 40597992 -79686320 + (GGGGA)n Simple_repeat Simple_repeat 2 176 0 1 894 255 61 0 0 chr13 40598105 40598138 -79686174 + (GGGGA)n Simple_repeat Simple_repeat 3 35 0 1 894 226 374 20 13 chr13 40598643 40598792 -79685520 - MIR SINE MIR -70 192 43 1 894 180 136 14 70 chr13 40601574 40601645 -79682667 + T-rich Low_complexity Low_complexity 3 69 0 1 894 491 261 8 8 chr13 40601648 40601768 -79682544 - ID_B1 SINE B4 -7 217 98 1 894 21 36 0 0 chr13 40601950 40601978 -79682334 + AT_rich Low_complexity Low_complexity 1 28 0 1 894 1537 192 86 17 chr13 40601992 40602342 -79681970 - ORR1D1 LTR MaLR 0 374 1 1 894 267 79 0 0 chr13 40602358 40602396 -79681916 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 894 470 160 21 0 chr13 40602456 40602564 -79681748 + B1F2 SINE Alu 13 128 -21 1 894 225 0 0 0 chr13 40602651 40602676 -79681636 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 894 544 294 12 18 chr13 40602676 40602842 -79681470 + ID_B1 SINE B4 51 215 -9 1 894 240 289 0 13 chr13 40602879 40602956 -79681356 - MTEb LTR MaLR -24 355 280 1 894 285 242 0 55 chr13 40603116 40603243 -79681069 + (CATA)n Simple_repeat Simple_repeat 1 120 0 1 894 238 360 67 21 chr13 40603629 40603867 -79680445 - L3 LINE CR1 -51 4438 4190 2 894 257 228 119 25 chr13 40604379 40604487 -79679825 - PB1D10 SINE Alu 0 117 6 2 894 199 399 45 8 chr13 40604492 40604626 -79679686 - MIRb SINE MIR -109 159 21 2 894 2165 201 59 21 chr13 40605580 40606058 -79678254 + Lx7 LINE L1 6008 6503 -1193 2 894 657 199 15 8 chr13 40606073 40606205 -79678107 + Lx7 LINE L1 7209 7341 -355 2 894 316 208 82 10 chr13 40606233 40606330 -79677982 - L1M5 LINE L1 -2962 3184 3081 2 894 1429 148 76 70 chr13 40606334 40606345 -79677967 + Lx7 LINE L1 7354 7360 -336 2 894 578 51 13 0 chr13 40606345 40606423 -79677889 + (TC)n Simple_repeat Simple_repeat 2 80 0 2 894 1429 148 76 70 chr13 40606423 40606752 -79677560 + Lx7 LINE L1 7361 7696 0 2 894 563 62 0 12 chr13 40607105 40607186 -79677126 + (CA)n Simple_repeat Simple_repeat 1 80 0 2 894 23 33 0 0 chr13 40607186 40607216 -79677096 + AT_rich Low_complexity Low_complexity 1 30 0 2 894 1516 257 13 5 chr13 40608213 40608589 -79675723 - MTEb LTR MaLR 0 379 1 2 894 575 298 75 57 chr13 40608683 40608964 -79675348 - B4A SINE B4 -6 286 1 2 894 532 305 165 22 chr13 40608967 40609282 -79675030 - MTEa LTR MaLR -19 360 1 2 894 321 179 6 0 chr13 40609289 40609355 -79674957 + PB1D10 SINE Alu 42 110 -39 2 894 251 320 20 0 chr13 40609355 40609389 -79674923 + ID_B1 SINE B4 123 224 0 2 894 259 357 20 0 chr13 40609436 40609534 -79674778 + ID_B1 SINE B4 82 181 -43 2 894 581 271 0 26 chr13 40609783 40609938 -79674374 + B3A SINE B2 2 152 -46 2 894 270 116 0 0 chr13 40609939 40609982 -79674330 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 894 261 0 0 0 chr13 40609982 40610010 -79674302 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 894 481 138 11 11 chr13 40610703 40610798 -79673514 + GA-rich Low_complexity Low_complexity 2 96 0 2 894 269 330 147 6 chr13 40610859 40611036 -79673276 - L2b LINE L2 -213 3162 2961 2 894 576 42 0 0 chr13 40612701 40612772 -79671540 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 894 233 190 37 25 chr13 40612779 40612860 -79671452 + (TA)n Simple_repeat Simple_repeat 2 83 0 2 894 391 356 38 66 chr13 40612938 40613227 -79671085 + B4 SINE B4 1 281 -11 2 894 816 193 28 0 chr13 40614968 40615113 -79669199 - B1_Mur4 SINE Alu 0 150 2 2 894 360 0 0 0 chr13 40615992 40616032 -79668280 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 894 266 244 163 0 chr13 40616181 40616267 -79668045 + PB1D7 SINE Alu 19 118 -2 2 894 24 0 0 0 chr13 40616323 40616347 -79667965 + AT_rich Low_complexity Low_complexity 1 24 0 2 894 283 306 0 30 chr13 40616508 40616609 -79667703 - ID_B1 SINE B4 -43 181 84 2 894 331 246 0 0 chr13 40617134 40617199 -79667113 + ID2 SINE ID 2 66 -17 2 894 207 0 0 0 chr13 40617295 40617318 -79666994 + (A)n Simple_repeat Simple_repeat 1 23 0 2 894 1789 179 64 3 chr13 40618695 40619037 -79665275 + ORR1B2 LTR MaLR 5 367 0 2 894 207 182 0 0 chr13 40619161 40619194 -79665118 + polypyrimidine Low_complexity Low_complexity 5 37 0 2 894 491 237 18 0 chr13 40619385 40619499 -79664813 - B3A SINE B2 -82 116 1 2 894 207 0 0 0 chr13 40619694 40619717 -79664595 + (CAAA)n Simple_repeat Simple_repeat 4 26 0 2 894 308 301 25 42 chr13 40620399 40620517 -79663795 - PB1D7 SINE Alu -2 118 3 2 894 752 132 8 0 chr13 40621291 40621420 -79662892 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 2 894 308 49 0 0 chr13 40621525 40621566 -79662746 - RLTR31B_Mm LTR ERVK -516 41 1 2 894 6484 71 35 5 chr13 40621667 40623117 -79661195 + L1VL2 LINE L1 325 1826 -1789 2 894 299 263 0 0 chr13 40623261 40623337 -79660975 - PB1D10 SINE Alu -2 115 40 2 894 210 154 0 0 chr13 40624197 40624236 -79660076 + T-rich Low_complexity Low_complexity 1 39 0 2 894 279 296 81 10 chr13 40624880 40624979 -79659333 + MTEb LTR MaLR 258 363 -16 2 894 252 330 23 0 chr13 40625180 40625268 -79659044 - RCHARR1 DNA MER1_type -697 277 188 2 894 242 311 0 0 chr13 40625595 40625656 -79658656 + ID4_ SINE ID 4 64 -19 2 894 305 62 0 58 chr13 40625668 40625737 -79658575 + (GGGA)n Simple_repeat Simple_repeat 4 68 0 2 894 345 263 8 34 chr13 40625755 40625873 -79658439 + GA-rich Low_complexity Low_complexity 3 117 0 2 894 281 225 57 17 chr13 40626302 40626396 -79657916 + ORR1D2 LTR MaLR 268 363 -7 2 894 3453 28 5 0 chr13 40627377 40627771 -79656541 - MTA_Mm LTR MaLR 0 396 1 2 894 558 227 6 17 chr13 40627800 40627975 -79656337 + C-rich Low_complexity Low_complexity 1 173 0 2 894 319 253 10 52 chr13 40628047 40628143 -79656169 + B3A SINE B2 1 92 -106 2 894 735 270 25 29 chr13 40628127 40628414 -79655898 - ORR1D-int LTR MaLR -1267 313 23 2 894 21 36 0 0 chr13 40628558 40628586 -79655726 + AT_rich Low_complexity Low_complexity 1 28 0 2 894 301 315 118 51 chr13 40629379 40629633 -79654679 + B4 SINE B4 2 272 -20 2 894 1002 113 0 0 chr13 40629723 40629874 -79654438 + (GGAA)n Simple_repeat Simple_repeat 1 151 0 2 894 549 312 68 0 chr13 40629998 40630203 -79654109 - MLT1B LTR MaLR 0 390 172 2 894 306 287 41 8 chr13 40630616 40630739 -79653573 + MER103 DNA DNA 19 145 -21 2 894 1222 259 19 39 chr13 40630907 40631269 -79653043 + MLT1A0 LTR MaLR 1 355 -10 2 894 1445 267 7 16 chr13 40631517 40631899 -79652413 - MTE2b LTR MaLR 0 370 1 2 895 496 250 12 106 chr13 40632852 40633013 -79651299 + RSINE1 SINE B4 3 148 -17 2 895 547 14 0 27 chr13 40633024 40633098 -79651214 + (CA)n Simple_repeat Simple_repeat 1 72 0 2 895 4534 108 109 8 chr13 40633784 40634519 -79649793 + RMER17D2 LTR ERVK 1 809 0 2 895 357 250 129 0 chr13 40634736 40634852 -79649460 - Ricksha_c DNA MuDR -1142 906 776 2 895 1195 247 51 53 chr13 40634994 40635055 -79649257 - MTE2b-int LTR MaLR -1015 355 295 2 895 2249 143 11 24 chr13 40635055 40635427 -79648885 + ORR1B2 LTR MaLR 1 367 0 2 895 1195 247 51 53 chr13 40635427 40635720 -79648592 - MTE2b-int LTR MaLR -1076 294 2 2 895 381 220 70 84 chr13 40635721 40635938 -79648374 - MTE2b LTR MaLR -19 360 62 2 895 634 159 8 8 chr13 40635973 40636100 -79648212 + CT-rich Low_complexity Low_complexity 2 128 0 2 895 551 301 39 94 chr13 40636117 40636425 -79647887 - B4A SINE B4 0 292 2 2 895 810 286 107 16 chr13 40636988 40637368 -79646944 - MTC LTR MaLR -14 407 1 2 895 438 356 91 30 chr13 40637957 40638072 -79646240 - MER70B LTR ERVL -156 422 307 2 895 192 40 0 0 chr13 40638072 40638097 -79646215 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 895 2887 86 40 0 chr13 40638098 40638503 -79645809 + BGLII LTR ERVK 1 421 0 2 895 438 356 91 30 chr13 40638503 40638683 -79645629 - MER70B LTR ERVL -272 306 107 2 895 180 135 0 0 chr13 40639683 40639720 -79644592 + (T)n Simple_repeat Simple_repeat 1 37 0 2 895 29 60 0 0 chr13 40640307 40640357 -79643955 + AT_rich Low_complexity Low_complexity 1 50 0 2 895 832 236 39 184 chr13 40640602 40641038 -79643274 - MTE2a LTR MaLR -4 375 3 2 895 230 73 0 24 chr13 40641543 40641585 -79642727 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 2 895 21 36 0 0 chr13 40641904 40641932 -79642380 + AT_rich Low_complexity Low_complexity 1 28 0 2 895 386 237 128 26 chr13 40641943 40642060 -79642252 + B1_Mus2 SINE Alu 2 130 -17 2 895 280 297 30 36 chr13 40642088 40642187 -79642125 + PB1D10 SINE Alu 3 103 -17 2 895 803 297 0 5 chr13 40643030 40643223 -79641089 - B4 SINE B4 -98 194 3 2 895 600 53 0 0 chr13 40643356 40643432 -79640880 + (GGAA)n Simple_repeat Simple_repeat 3 78 0 2 895 1158 71 6 12 chr13 40643437 40643609 -79640703 + (GAAA)n Simple_repeat Simple_repeat 4 174 0 2 895 1097 124 0 11 chr13 40643612 40643963 -79640349 + (GGAA)n Simple_repeat Simple_repeat 1 346 0 2 895 635 65 0 21 chr13 40644253 40644347 -79639965 + (TCTCC)n Simple_repeat Simple_repeat 2 93 0 2 895 569 348 85 28 chr13 40644382 40644557 -79639755 + MLT2B2 LTR ERVL 2 178 -337 2 895 391 33 16 0 chr13 40644557 40644618 -79639694 - L1_Mus4 LINE L1 -3 6633 6572 2 895 569 348 85 28 chr13 40644618 40644876 -79639436 + MLT2B2 LTR ERVL 179 460 -55 2 895 1621 222 21 131 chr13 40645001 40645520 -79638792 - RMER19C LTR ERVK -8 603 142 2 895 856 255 31 18 chr13 40645529 40645770 -79638542 + MTD LTR MaLR 3 226 -174 2 895 2121 249 75 11 chr13 40645770 40646302 -79638010 + Lx6 LINE L1 6891 7456 -4 2 895 839 232 65 23 chr13 40646305 40646521 -79637791 + MTD LTR MaLR 195 419 0 2 895 626 264 6 6 chr13 40646859 40647015 -79637297 - ID_B1 SINE B4 0 224 69 2 895 364 308 32 32 chr13 40647206 40647233 -79637079 - B1F1 SINE Alu -19 130 103 2 895 369 0 0 0 chr13 40647233 40647274 -79637038 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 895 333 118 0 0 chr13 40647276 40647327 -79636985 + (CATA)n Simple_repeat Simple_repeat 4 54 0 2 895 375 312 0 0 chr13 40647327 40647420 -79636892 - PB1D10 SINE Alu -18 99 7 2 895 222 308 0 44 chr13 40647366 40647434 -79636878 - B4A SINE B4 -147 145 81 2 895 295 234 16 0 chr13 40647464 40647511 -79636801 - B1F1 SINE Alu -11 138 91 2 895 1612 204 59 16 chr13 40647511 40647899 -79636413 + MTD LTR MaLR 1 405 -14 2 895 275 216 20 111 chr13 40647911 40648010 -79636302 - B1_Mur3 SINE Alu -58 91 2 2 895 180 0 0 0 chr13 40648035 40648055 -79636257 + (A)n Simple_repeat Simple_repeat 1 20 0 2 895 230 412 6 12 chr13 40648279 40648441 -79635871 - MIRb SINE MIR -102 166 6 2 895 316 214 112 37 chr13 40648461 40648568 -79635744 - MIR SINE MIR -44 218 104 2 895 1038 175 29 84 chr13 40648915 40649156 -79635156 + MTD LTR MaLR 145 373 -46 2 895 225 0 0 0 chr13 40649156 40649181 -79635131 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 895 1038 175 29 84 chr13 40649181 40649213 -79635099 + MTD LTR MaLR 374 403 -16 2 895 411 21 0 0 chr13 40649424 40649472 -79634840 + (TTTC)n Simple_repeat Simple_repeat 4 51 0 2 895 340 236 96 53 chr13 40650318 40650412 -79633900 + PB1D10 SINE Alu 3 100 -17 2 895 400 270 240 23 chr13 40650437 40650608 -79633704 + B4 SINE B4 11 218 -74 3 895 739 323 30 15 chr13 40650637 40650904 -79633408 + ORR1D2 LTR MaLR 1 271 -99 3 895 216 0 0 0 chr13 40651454 40651478 -79632834 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 895 1500 205 53 9 chr13 40651721 40652041 -79632271 - MTC LTR MaLR -6 415 82 3 895 719 228 54 0 chr13 40652037 40652204 -79632108 - MTEb LTR MaLR -191 188 13 3 895 353 247 44 56 chr13 40652335 40652425 -79631887 + PB1D10 SINE Alu 6 94 -23 3 895 384 273 37 18 chr13 40652755 40652919 -79631393 - MIR SINE MIR -3 259 93 3 895 449 238 0 9 chr13 40653666 40653772 -79630540 + ID_B1 SINE B4 119 223 -1 3 895 545 294 12 30 chr13 40653774 40653939 -79630373 + RSINE1 SINE B4 4 165 0 3 895 237 159 0 0 chr13 40653943 40653987 -79630325 + (CATG)n Simple_repeat Simple_repeat 1 44 0 3 895 234 91 0 0 chr13 40653994 40654027 -79630285 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 3 895 267 31 0 0 chr13 40654509 40654541 -79629771 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3 895 489 239 28 28 chr13 40654557 40654699 -79629613 - RSINE1 SINE B4 -21 144 3 3 895 361 298 83 115 chr13 40655016 40655391 -79628921 - ORR1E LTR MaLR -11 363 1 3 895 255 31 0 0 chr13 40657678 40657710 -79626602 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 895 252 59 0 0 chr13 40658206 40658240 -79626072 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 3 895 1413 34 0 0 chr13 40658418 40658597 -79625715 + (TTGG)n Simple_repeat Simple_repeat 1 179 0 3 895 396 0 0 0 chr13 40658676 40658720 -79625592 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 895 308 181 0 12 chr13 40658733 40658817 -79625495 + CT-rich Low_complexity Low_complexity 1 83 0 3 895 363 23 0 0 chr13 40659174 40659218 -79625094 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 895 285 274 0 110 chr13 40660031 40660056 -79624256 + MT2B LTR ERVL 145 257 -344 3 895 482 245 0 0 chr13 40660056 40660158 -79624154 + B1_Mur2 SINE Alu 3 104 -45 3 895 441 0 0 0 chr13 40660158 40660207 -79624105 + (GAAA)n Simple_repeat Simple_repeat 1 49 0 3 895 456 19 0 0 chr13 40660207 40660259 -79624053 + (GGGA)n Simple_repeat Simple_repeat 2 54 0 3 895 399 205 1 3 chr13 40660447 40660526 -79623786 + B4A SINE B4 2 80 -85 3 895 192 182 0 0 chr13 40660532 40660576 -79623736 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 895 486 284 108 15 chr13 40661972 40662176 -79622136 - MER2 DNA MER2_type -122 223 1 3 895 269 346 28 37 chr13 40664333 40664431 -79619881 + B1F1 SINE Alu 7 104 -45 3 895 203 0 0 36 chr13 40664431 40664459 -79619853 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 3 895 459 286 175 0 chr13 40664560 40664777 -79619535 + MER2 DNA MER2_type 90 344 -1 3 895 301 355 35 12 chr13 40665061 40665232 -79619080 + LTR31 LTR ERV1 157 331 -288 3 895 180 0 0 0 chr13 40665238 40665258 -79619054 + (A)n Simple_repeat Simple_repeat 1 20 0 3 895 2250 265 105 44 chr13 40665280 40666637 -79617675 + Lx9 LINE L1 4949 6427 -1046 3 895 2016 225 75 24 chr13 40666644 40667181 -79617131 + Lx9 LINE L1 7073 7636 -8 3 895 257 260 108 58 chr13 40667305 40667583 -79616729 + L1M5 LINE L1 2737 3028 -3118 3 895 300 195 84 12 chr13 40667682 40667765 -79616547 + L1M5 LINE L1 3145 3233 -2913 3 895 282 214 113 14 chr13 40667770 40667841 -79616471 + B3A SINE B2 2 79 -119 3 895 228 318 106 0 chr13 40667841 40667853 -79616459 + RSINE1 SINE B4 3 94 -71 3 895 1120 241 116 96 chr13 40667853 40668216 -79616096 - ORR1D2 LTR MaLR 0 370 1 3 895 2073 244 60 31 chr13 40668222 40668255 -79616057 - ORR1D2-int LTR MaLR -7 1363 1331 3 895 315 0 0 0 chr13 40668255 40668290 -79616022 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 895 2073 244 60 31 chr13 40668290 40668835 -79615477 - ORR1D2-int LTR MaLR -40 1330 768 3 895 962 264 14 68 chr13 40668842 40669182 -79615130 - ORR1D2-int LTR MaLR -779 591 270 3 895 3437 76 44 10 chr13 40669182 40669661 -79614651 + L1Md_F2 LINE L1 6088 6582 0 3 895 962 264 14 68 chr13 40669661 40669673 -79614639 - ORR1D2-int LTR MaLR -1101 269 258 3 895 507 252 19 0 chr13 40669913 40670020 -79614292 - RSINE1 SINE B4 -55 110 2 3 895 248 70 0 23 chr13 40670215 40670259 -79614053 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 895 666 161 202 0 chr13 40671599 40671723 -79612589 + B1_Mur3 SINE Alu 1 149 0 3 895 517 310 6 55 chr13 40673684 40673848 -79610464 - RSINE1 SINE B4 -4 161 6 3 895 264 262 0 15 chr13 40673859 40673925 -79610387 + CT-rich Low_complexity Low_complexity 2 66 0 3 895 369 323 21 63 chr13 40673925 40674067 -79610245 - B1F SINE Alu -13 136 1 3 895 581 293 13 13 chr13 40674559 40674718 -79609594 - RSINE1 SINE B4 -6 159 1 3 895 669 294 0 35 chr13 40675514 40675683 -79608629 - RSINE1 SINE B4 0 165 3 3 895 370 182 26 13 chr13 40675729 40675807 -79608505 + ID4_ SINE ID 3 81 -2 3 895 456 286 87 45 chr13 40676429 40676671 -79607641 + MER2 DNA MER2_type 1 252 -93 3 895 800 300 36 36 chr13 40677783 40678118 -79606194 - MLT1A0 LTR MaLR -8 357 23 3 895 264 30 0 0 chr13 40678681 40678714 -79605598 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 895 925 134 0 7 chr13 40678740 40678883 -79605429 - B1_Mus1 SINE Alu -1 147 6 3 895 406 214 0 145 chr13 40678775 40678906 -79605406 - MT2B LTR ERVL -337 264 153 3 895 357 102 0 0 chr13 40679751 40679810 -79604502 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 895 510 263 120 19 chr13 40680510 40680719 -79603593 + L3b LINE CR1 11 240 -242 3 895 279 247 25 0 chr13 40681034 40681115 -79603197 - MIR SINE MIR -133 129 47 3 895 451 294 23 64 chr13 40682613 40682784 -79601528 + RSINE1 SINE B4 2 165 0 3 895 693 150 20 0 chr13 40682784 40682931 -79601381 + (CA)n Simple_repeat Simple_repeat 1 150 0 3 895 36175 35 0 0 chr13 40683016 40688473 -79595839 + L1Md_T LINE L1 36 5589 -297 3 895 9123 8 0 0 chr13 40688473 40689469 -79594843 + L1Md_T LINE L1 5590 6585 0 3 895 629 312 53 19 chr13 40689657 40689866 -79594446 + ID_B1 SINE B4 5 220 -4 3 895 285 301 144 61 chr13 40691040 40691485 -79592827 + L2a LINE L2 2921 3402 -24 3 895 807 40 0 0 chr13 40692438 40692537 -79591775 + (CCCTG)n Simple_repeat Simple_repeat 5 103 0 3 895 212 310 0 94 chr13 40692540 40692560 -79591752 - B4A SINE B4 -119 173 87 3 895 235 229 53 79 chr13 40692560 40692636 -79591676 - B1F SINE Alu -74 75 2 3 895 552 314 55 37 chr13 40692997 40693215 -79591097 - B4 SINE B4 -5 287 66 3 895 246 326 23 0 chr13 40693238 40693324 -79590988 - B4 SINE B4 -203 89 2 3 895 360 246 8 60 chr13 40693556 40693690 -79590622 + GA-rich Low_complexity Low_complexity 5 131 0 3 895 793 251 31 36 chr13 40693715 40693909 -79590403 - B3A SINE B2 -4 194 2 3 895 328 328 76 22 chr13 40694167 40694351 -79589961 + MER58A DNA MER1_type 30 223 -1 3 895 602 213 13 90 chr13 40694618 40694773 -79589539 + B1F2 SINE Alu 6 148 -1 3 895 386 274 23 31 chr13 40695081 40695209 -79589103 - MLT1A1 LTR MaLR -14 394 268 3 895 288 265 15 0 chr13 40695576 40695644 -79588668 + ID4_ SINE ID 2 70 -13 3 895 26 0 0 0 chr13 40695798 40695824 -79588488 + AT_rich Low_complexity Low_complexity 1 26 0 3 895 428 246 82 0 chr13 40696289 40696411 -79587901 - B1F SINE Alu -1 148 17 3 895 418 244 75 45 chr13 40696419 40696552 -79587760 - ID_B1 SINE B4 -1 223 87 3 895 420 266 0 34 chr13 40696615 40696732 -79587580 + PB1D10 SINE Alu 3 115 -2 3 895 316 167 30 15 chr13 40696840 40696907 -79587405 + L1MCa LINE L1 75 142 -6366 3 895 248 222 211 0 chr13 40697852 40697942 -79586370 - MER104 DNA Tc2 -69 112 4 3 895 1281 57 17 39 chr13 40698428 40698609 -79585703 + B2_Mm2 SINE B2 1 177 -18 3 895 22 35 0 0 chr13 40698609 40698638 -79585674 + AT_rich Low_complexity Low_complexity 1 29 0 3 895 303 333 54 68 chr13 40698717 40698965 -79585347 + B4 SINE B4 68 274 -18 3 895 212 284 0 43 chr13 40699056 40699126 -79585186 + GA-rich Low_complexity Low_complexity 3 69 0 3 895 298 250 0 15 chr13 40700298 40700363 -79583949 - RSINE1 SINE B4 -100 65 2 3 895 471 280 29 51 chr13 40700363 40700501 -79583811 - B4A SINE B4 -62 230 97 3 895 222 37 0 0 chr13 40700738 40700765 -79583547 + (A)n Simple_repeat Simple_repeat 1 27 0 3 895 213 39 0 0 chr13 40702323 40702349 -79581963 + (GA)n Simple_repeat Simple_repeat 1 26 0 3 895 225 247 28 40 chr13 40703331 40703508 -79580804 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 3 895 602 283 7 0 chr13 40703522 40703660 -79580652 + B1F SINE Alu 1 139 -10 3 895 333 0 0 0 chr13 40704969 40705006 -79579306 + (TGGA)n Simple_repeat Simple_repeat 3 39 0 3 895 2000 136 15 60 chr13 40705007 40705343 -79578969 + ORR1A3 LTR MaLR 2 322 -4 3 895 396 59 0 0 chr13 40705345 40705396 -79578916 + (TGGA)n Simple_repeat Simple_repeat 3 53 0 3 895 351 65 0 0 chr13 40705437 40705483 -79578829 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 895 343 322 51 26 chr13 40706231 40706387 -79577925 - Lx7 LINE L1 -591 7105 6946 3 895 23 33 0 0 chr13 40706452 40706482 -79577830 + AT_rich Low_complexity Low_complexity 1 30 0 3 895 372 71 0 0 chr13 40707495 40707551 -79576761 + (TCTCTG)n Simple_repeat Simple_repeat 3 58 0 3 895 279 0 0 0 chr13 40707551 40707581 -79576731 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 895 2515 257 17 82 chr13 40707749 40708784 -79575528 + L1ME3 LINE L1 3359 4326 -1820 3 895 397 307 70 29 chr13 40708856 40709027 -79575285 - MLT1C LTR MaLR -4 463 286 3 895 440 261 17 0 chr13 40709029 40709148 -79575164 - L1MD LINE L1 -1972 4174 4054 3 895 273 310 99 52 chr13 40709156 40709408 -79574904 - MLT1C LTR MaLR -193 274 11 3 895 319 325 77 19 chr13 40709434 40709641 -79574671 + L1ME3 LINE L1 4649 4867 -1279 3 895 1078 227 96 78 chr13 40709645 40709798 -79574514 + ORR1E LTR MaLR 1 163 -196 3 895 681 36 0 0 chr13 40709798 40709882 -79574430 + (TC)n Simple_repeat Simple_repeat 1 84 0 3 895 1078 227 96 78 chr13 40709882 40710072 -79574240 + ORR1E LTR MaLR 164 350 -9 3 895 430 307 22 0 chr13 40710301 40710438 -79573874 + B1F1 SINE Alu 2 141 -8 4 895 2227 215 62 28 chr13 40710485 40711179 -79573133 + L1ME3 LINE L1 5216 5923 -239 3 895 513 0 0 0 chr13 40711197 40711254 -79573058 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 895 859 281 33 66 chr13 40711254 40711555 -79572757 + B4A SINE B4 2 292 0 4 895 327 260 38 19 chr13 40711718 40711824 -79572488 + L1ME3 LINE L1 6030 6137 -105 3 895 558 241 73 0 chr13 40711932 40712069 -79572243 + B3A SINE B2 1 147 -51 4 895 480 126 0 0 chr13 40713347 40713434 -79570878 + (CGTG)n Simple_repeat Simple_repeat 1 87 0 4 895 532 248 0 8 chr13 40713434 40713552 -79570760 - B3A SINE B2 -48 150 34 4 895 526 29 0 0 chr13 40713556 40713625 -79570687 + B1_Mus2 SINE Alu 3 71 -76 4 895 388 217 12 0 chr13 40713625 40713639 -79570673 + B4 SINE B4 88 171 -121 4 895 313 276 42 63 chr13 40714248 40714391 -79569921 + MLT1B LTR MaLR 3 142 -248 4 895 2597 136 75 18 chr13 40714507 40714542 -79569770 + RMER4A LTR ERVK 1 35 -431 4 895 189 0 0 0 chr13 40714542 40714563 -79569749 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 895 2597 136 75 18 chr13 40714563 40714968 -79569344 + RMER4A LTR ERVK 36 465 -1 4 895 811 181 0 0 chr13 40715393 40715537 -79568775 + B1_Mur4 SINE Alu 2 145 -5 4 895 287 326 31 87 chr13 40715403 40715564 -79568748 + B4A SINE B4 96 247 -45 4 895 2546 236 81 21 chr13 40715683 40716450 -79567862 + RCHARR1 DNA MER1_type 97 908 -66 4 895 192 152 0 0 chr13 40716450 40716483 -79567829 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 4 895 343 253 12 0 chr13 40716687 40716770 -79567542 - PB1D10 SINE Alu -7 110 27 4 895 712 182 12 6 chr13 40717262 40717428 -79566884 + GA-rich Low_complexity Low_complexity 2 168 0 4 895 363 278 78 0 chr13 40718549 40718664 -79565648 - B1F1 SINE Alu 0 149 26 4 895 724 243 80 62 chr13 40718686 40718962 -79565350 + B4A SINE B4 1 281 -11 4 895 852 198 38 81 chr13 40719091 40719327 -79564985 + URR1A DNA MER1_type 1 226 0 4 895 180 0 0 0 chr13 40719359 40719379 -79564933 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 895 1437 63 10 21 chr13 40721176 40721369 -79562943 + B2_Mm1t SINE B2 1 191 -2 4 895 39384 5 0 0 chr13 40721430 40727009 -79557303 + L1Md_A LINE L1 8 5586 -297 4 895 9187 4 0 0 chr13 40727009 40728005 -79556307 + L1Md_A LINE L1 5587 6582 0 4 895 201 74 0 0 chr13 40728018 40728045 -79556267 + (A)n Simple_repeat Simple_repeat 1 27 0 4 895 319 210 47 47 chr13 40728849 40728934 -79555378 - B3A SINE B2 -105 93 9 4 895 212 301 10 36 chr13 40729079 40729218 -79555094 + GA-rich Low_complexity Low_complexity 1 135 0 4 895 3199 256 65 34 chr13 40729239 40730201 -79554111 + Lx8 LINE L1 6423 7414 -59 4 895 328 202 121 40 chr13 40730229 40730353 -79553959 + Lx8 LINE L1 7338 7471 -2 4 895 680 188 15 124 chr13 40730606 40730674 -79553638 + RMER1B Other Other 888 949 -117 4 895 747 100 0 0 chr13 40730674 40730784 -79553528 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 4 895 680 188 15 124 chr13 40730784 40730855 -79553457 + RMER1B Other Other 950 1015 -51 4 895 1188 62 0 0 chr13 40730855 40731001 -79553311 + B1_Mus1 SINE Alu 2 147 -1 4 895 680 188 15 124 chr13 40731001 40731061 -79553251 + RMER1B Other Other 1016 1066 0 4 895 860 257 9 18 chr13 40731965 40732183 -79552129 - B3 SINE B2 0 216 1 4 895 180 0 0 0 chr13 40732261 40732281 -79552031 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 895 1308 96 0 16 chr13 40732397 40732587 -79551725 + B2_Mm2 SINE B2 1 187 -8 4 895 198 0 0 0 chr13 40733248 40733270 -79551042 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 4 895 254 213 16 32 chr13 40734484 40734547 -79549765 - ID4_ SINE ID -8 75 14 4 895 492 269 156 12 chr13 40735795 40735968 -79548344 - B3A SINE B2 0 198 1 4 895 358 237 181 22 chr13 40736102 40736240 -79548072 - B4 SINE B4 -69 223 64 4 895 563 316 8 60 chr13 40736743 40736995 -79547317 + MER2 DNA MER2_type 107 345 0 4 895 525 274 55 84 chr13 40737293 40737604 -79546708 + L1MB2 LINE L1 5820 6121 -50 4 895 279 0 0 0 chr13 40739083 40739114 -79545198 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 895 212 0 0 35 chr13 40739116 40739145 -79545167 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 4 895 603 0 0 0 chr13 40739474 40739541 -79544771 + (TGGA)n Simple_repeat Simple_repeat 1 67 0 4 895 198 296 121 10 chr13 40739946 40740045 -79544267 + MIR3 SINE MIR 93 202 -6 4 895 606 189 0 0 chr13 40740128 40740308 -79544004 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 895 567 282 45 9 chr13 40740311 40740487 -79543825 - B3A SINE B2 -14 202 24 4 895 473 0 0 17 chr13 40740510 40740568 -79543744 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 4 895 198 103 0 0 chr13 40741070 40741099 -79543213 + (T)n Simple_repeat Simple_repeat 1 29 0 4 895 1042 114 11 11 chr13 40742485 40742663 -79541649 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 4 895 279 0 0 0 chr13 40742665 40742696 -79541616 + (GGAA)n Simple_repeat Simple_repeat 1 31 0 4 895 375 23 0 0 chr13 40742766 40742810 -79541502 + (TTTG)n Simple_repeat Simple_repeat 3 46 0 4 895 288 0 0 0 chr13 40743822 40743854 -79540458 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 895 204 125 0 0 chr13 40744255 40744287 -79540025 + (TTG)n Simple_repeat Simple_repeat 2 33 0 4 895 261 0 0 0 chr13 40745851 40745880 -79538432 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 895 23 0 0 0 chr13 40746221 40746244 -79538068 + AT_rich Low_complexity Low_complexity 1 23 0 4 895 250 293 0 51 chr13 40747473 40747552 -79536760 + MER2 DNA MER2_type 1 75 -270 4 895 226 200 0 0 chr13 40747613 40747653 -79536659 - ID4 SINE ID -43 40 1 4 895 558 296 147 5 chr13 40747672 40747876 -79536436 + MER2 DNA MER2_type 113 345 0 4 895 264 30 0 0 chr13 40748883 40748916 -79535396 + (A)n Simple_repeat Simple_repeat 1 33 0 4 895 194 222 0 18 chr13 40749219 40749274 -79535038 + GA-rich Low_complexity Low_complexity 2 55 0 4 895 889 154 9 28 chr13 40749285 40749704 -79534608 + GA-rich Low_complexity Low_complexity 1 411 0 4 895 237 169 305 0 chr13 40750439 40750498 -79533814 + ID SINE ID 2 78 -146 4 895 480 106 97 0 chr13 40750511 40750605 -79533707 - B1_Mur4 SINE Alu -41 107 1 4 895 561 237 25 44 chr13 40750607 40750766 -79533546 - URR1B DNA MER1_type -69 156 1 4 895 278 133 32 43 chr13 40750803 40750897 -79533415 + CT-rich Low_complexity Low_complexity 1 93 0 4 895 346 200 0 0 chr13 40751167 40751232 -79533080 - Lx5 LINE L1 -170 6880 6816 4 895 347 198 39 10 chr13 40751228 40751321 -79532991 + Lx5 LINE L1 6945 7041 -9 4 895 456 19 0 0 chr13 40751321 40751374 -79532938 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 4 895 204 40 0 0 chr13 40752230 40752255 -79532057 + (T)n Simple_repeat Simple_repeat 1 25 0 4 895 401 284 68 86 chr13 40753124 40753243 -79531069 + L1MA5 LINE L1 5980 6103 -197 4 895 1448 138 4 9 chr13 40753243 40753469 -79530843 + URR1B DNA MER1_type 1 225 0 4 895 401 284 68 86 chr13 40753469 40753509 -79530803 + L1MA5 LINE L1 6104 6131 -169 4 895 376 260 0 0 chr13 40753509 40753586 -79530726 + ID4 SINE ID 1 77 -6 4 895 401 284 68 86 chr13 40753586 40753703 -79530609 + L1MA5 LINE L1 6132 6252 -48 4 895 537 269 43 24 chr13 40753764 40753928 -79530384 - B4A SINE B4 0 292 126 4 895 743 207 212 0 chr13 40755383 40755605 -79528707 - MER2 DNA MER2_type -76 269 1 4 895 421 205 127 106 chr13 40756003 40756079 -79528233 + B1F SINE Alu 4 73 -76 4 895 1397 95 0 16 chr13 40756079 40756271 -79528041 + B2_Mm2 SINE B2 1 189 -6 4 895 421 205 127 106 chr13 40756271 40756323 -79527989 + B1F SINE Alu 74 138 -11 4 895 861 62 0 0 chr13 40756323 40756435 -79527877 + (GGAAA)n Simple_repeat Simple_repeat 3 114 0 4 895 421 205 127 106 chr13 40756435 40756447 -79527865 + B1F SINE Alu 139 148 -1 4 895 213 167 24 0 chr13 40756538 40756580 -79527732 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 895 315 0 0 0 chr13 40756606 40756641 -79527671 + (TTA)n Simple_repeat Simple_repeat 2 36 0 4 895 258 32 0 0 chr13 40757369 40757400 -79526912 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 895 289 257 57 0 chr13 40757780 40757850 -79526462 + ID4_ SINE ID 2 75 -8 4 895 953 183 49 34 chr13 40757947 40758151 -79526161 - B3 SINE B2 -5 211 5 4 895 824 245 33 42 chr13 40758171 40758384 -79525928 + B3 SINE B2 2 212 -4 4 895 722 211 0 0 chr13 40758402 40758530 -79525782 + B1_Mur3 SINE Alu 21 148 -1 4 895 22 35 0 0 chr13 40758548 40758577 -79525735 + AT_rich Low_complexity Low_complexity 1 29 0 4 895 294 317 96 33 chr13 40759476 40759593 -79524719 + B1_Mur1 SINE Alu 2 121 -26 4 895 529 285 0 27 chr13 40759661 40759809 -79524503 + RSINE1 SINE B4 2 145 -20 4 895 186 43 0 0 chr13 40759836 40759859 -79524453 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 895 324 232 29 0 chr13 40760216 40760285 -79524027 + ID_B1 SINE B4 151 221 -3 4 895 1142 82 0 0 chr13 40760293 40760439 -79523873 + B1_Mus1 SINE Alu 3 148 0 4 895 28 29 0 0 chr13 40760441 40760476 -79523836 + AT_rich Low_complexity Low_complexity 1 35 0 4 895 491 265 78 6 chr13 40760632 40760799 -79523513 + MLT1B LTR MaLR 1 179 -211 4 895 421 290 0 20 chr13 40760803 40760905 -79523407 + PB1D7 SINE Alu 7 106 -14 4 895 366 232 18 18 chr13 40760920 40761034 -79523278 + MLT1B LTR MaLR 160 273 -117 4 895 198 0 0 0 chr13 40761146 40761168 -79523144 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 895 314 342 97 71 chr13 40761180 40762040 -79522272 + L2 LINE L2 2151 3032 -387 4 895 25 0 0 0 chr13 40762122 40762147 -79522165 + AT_rich Low_complexity Low_complexity 1 25 0 4 895 794 211 76 0 chr13 40762302 40762473 -79521839 - RMER1C Other Other -8 1334 1151 4 895 384 239 63 18 chr13 40762633 40762744 -79521568 + B1F1 SINE Alu 32 147 -2 4 895 193 232 14 14 chr13 40762769 40762839 -79521473 + GA-rich Low_complexity Low_complexity 4 73 0 4 896 226 318 36 36 chr13 40763673 40763784 -79520528 - MLT1A0 LTR MaLR -37 328 218 4 896 616 203 73 0 chr13 40764004 40764127 -79520185 + B1_Mur3 SINE Alu 3 134 -15 4 896 852 261 14 5 chr13 40764341 40764557 -79519755 - ID_B1 SINE B4 -6 218 1 4 896 490 254 29 36 chr13 40764701 40764840 -79519472 + ID_B1 SINE B4 82 219 -5 4 896 777 284 16 0 chr13 40764889 40765083 -79519229 + B3 SINE B2 19 215 -1 5 896 23 0 0 0 chr13 40765152 40765175 -79519137 + AT_rich Low_complexity Low_complexity 1 23 0 5 896 328 248 0 57 chr13 40765327 40765451 -79518861 + (CCCTG)n Simple_repeat Simple_repeat 3 119 0 5 896 271 256 12 71 chr13 40765511 40765595 -79518717 + ID4 SINE ID 1 79 -4 5 896 338 284 91 60 chr13 40765712 40765783 -79518529 + L1MA9 LINE L1 5820 5887 -404 5 896 1355 7 22 14 chr13 40765783 40766058 -79518254 + (CAGAGA)n Simple_repeat Simple_repeat 1 277 0 5 896 338 282 94 56 chr13 40766058 40766195 -79518117 + L1MA9 LINE L1 5888 6032 -280 5 896 380 276 0 0 chr13 40766223 40766310 -79518002 + PB1D7 SINE Alu 24 110 -10 5 896 335 283 186 16 chr13 40766339 40766533 -79517779 + L1MA9 LINE L1 6052 6278 -34 5 896 221 186 136 0 chr13 40766535 40766594 -79517718 + PB1 SINE Alu 29 95 -32 5 896 556 219 31 2 chr13 40766689 40766817 -79517495 + B1_Mur1 SINE Alu 1 129 -20 5 896 251 333 0 0 chr13 40767032 40767113 -79517199 - ID4_ SINE ID -1 82 2 5 896 452 158 12 0 chr13 40767146 40767228 -79517084 - ID_B1 SINE B4 -56 168 86 5 896 25 0 0 0 chr13 40767239 40767264 -79517048 + AT_rich Low_complexity Low_complexity 1 25 0 5 896 391 318 0 9 chr13 40767464 40767575 -79516737 + PB1D10 SINE Alu 3 112 -5 5 896 476 339 93 29 chr13 40767722 40768032 -79516280 - MLT1A0 LTR MaLR -2 363 34 5 896 281 89 22 0 chr13 40768498 40768543 -79515769 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 896 188 240 0 57 chr13 40769495 40769548 -79514764 - MIR SINE MIR -100 162 113 5 896 391 117 51 33 chr13 40770774 40770873 -79513439 + PB1D10 SINE Alu 17 115 -2 5 896 685 246 81 6 chr13 40770878 40771050 -79513262 + B3 SINE B2 2 186 -30 5 896 469 299 26 39 chr13 40771374 40771527 -79512785 - RSINE1 SINE B4 0 165 15 5 896 297 0 0 0 chr13 40771527 40771560 -79512752 + (A)n Simple_repeat Simple_repeat 1 33 0 5 896 208 330 22 22 chr13 40772428 40772518 -79511794 - MIRc SINE MIR -56 212 123 5 896 470 330 52 59 chr13 40772593 40772880 -79511432 + B4 SINE B4 2 286 -6 5 896 284 0 28 0 chr13 40772922 40772958 -79511354 + (TAGA)n Simple_repeat Simple_repeat 3 39 0 5 896 406 294 112 16 chr13 40773074 40773316 -79510996 + Charlie5 DNA MER1_type 2355 2619 -5 5 896 311 265 61 0 chr13 40773813 40773911 -79510401 - MLT1I LTR MaLR -2 409 306 5 896 509 288 77 0 chr13 40774229 40774399 -79509913 + B3A SINE B2 16 198 0 5 896 245 208 14 0 chr13 40775120 40775192 -79509120 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 896 2838 54 16 0 chr13 40775193 40775579 -79508733 - MTB LTR MaLR -8 392 1 5 896 474 340 7 0 chr13 40775579 40775720 -79508592 - B3A SINE B2 -21 177 36 5 896 576 147 21 0 chr13 40775729 40775824 -79508488 + B1_Mur2 SINE Alu 44 140 -9 5 896 1182 115 11 16 chr13 40776433 40776618 -79507694 + B2_Mm1a SINE B2 1 184 -9 5 896 755 262 135 20 chr13 40777399 40777644 -79506668 - B4A SINE B4 -17 275 3 5 896 1106 108 0 0 chr13 40777660 40777808 -79506504 + B1_Mus1 SINE Alu 1 148 0 5 896 253 321 161 35 chr13 40777892 40778066 -79506246 - MLT1I LTR MaLR -389 235 40 5 896 425 280 14 43 chr13 40777947 40778085 -79506227 - MLT2C1 LTR ERVL -263 134 1 5 896 268 293 40 0 chr13 40778144 40778219 -79506093 + ID4_ SINE ID 1 78 -5 5 896 398 296 37 7 chr13 40778329 40778465 -79505847 + B1F SINE Alu 3 142 -7 5 896 275 239 126 31 chr13 40778651 40778776 -79505536 + ID_B1 SINE B4 5 141 -151 5 896 252 282 141 0 chr13 40780071 40780142 -79504170 + PB1D10 SINE Alu 1 81 -36 5 896 207 0 0 0 chr13 40780143 40780166 -79504146 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5 896 453 270 31 68 chr13 40780241 40780253 -79504059 - ID_B1 SINE B4 -18 206 172 5 896 695 184 18 0 chr13 40780253 40780367 -79503945 - B1_Mur4 SINE Alu -34 116 1 5 896 453 270 31 68 chr13 40780367 40780404 -79503908 - ID_B1 SINE B4 -18 171 50 5 896 286 329 65 90 chr13 40780369 40780646 -79503666 + ORR1E LTR MaLR 87 356 -3 5 896 3162 66 5 2 chr13 40780869 40781264 -79503048 + MTA_Mm LTR MaLR 1 396 0 5 896 579 191 0 0 chr13 40781446 40781603 -79502709 + (TG)n Simple_repeat Simple_repeat 2 158 0 5 896 228 135 0 0 chr13 40781695 40781732 -79502580 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 896 302 230 81 0 chr13 40781782 40781856 -79502456 - ID4_ SINE ID -3 80 1 5 896 478 245 0 19 chr13 40782088 40782192 -79502120 - PB1D10 SINE Alu -1 116 15 5 896 262 167 66 16 chr13 40783383 40783444 -79500868 - ID4 SINE ID -19 64 1 5 896 873 269 20 5 chr13 40784167 40784365 -79499947 + ORR1D2 LTR MaLR 8 208 -162 5 896 244 194 62 46 chr13 40784375 40784440 -79499872 + 4.5SRNA scRNA scRNA 23 88 -6 5 896 612 205 0 0 chr13 40784383 40784495 -79499817 + B1_Mur4 SINE Alu 38 149 -1 5 896 763 196 39 56 chr13 40784504 40784682 -79499630 + ORR1D2 LTR MaLR 195 369 -1 5 896 660 289 0 0 chr13 40784785 40784920 -79499392 + RSINE1 SINE B4 6 140 -25 5 896 204 97 0 0 chr13 40784931 40784962 -79499350 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 5 896 2545 148 0 17 chr13 40785517 40785928 -79498384 - MTB_Mm LTR MaLR 0 407 4 5 896 2174 155 104 0 chr13 40786154 40786528 -79497784 - MTC LTR MaLR -6 415 3 5 896 269 73 0 0 chr13 40786533 40786574 -79497738 + Lx6 LINE L1 7415 7455 -5 5 896 315 122 0 0 chr13 40786693 40786742 -79497570 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 896 226 282 136 34 chr13 40787249 40787337 -79496975 + B4A SINE B4 76 172 -120 5 896 385 200 0 0 chr13 40787273 40787338 -79496974 + B1F SINE Alu 20 84 -65 5 896 333 0 0 0 chr13 40787344 40787381 -79496931 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 896 224 214 0 0 chr13 40787467 40787509 -79496803 + (TCCA)n Simple_repeat Simple_repeat 1 42 0 5 896 253 242 57 57 chr13 40787637 40787707 -79496605 + ID4 SINE ID 14 83 0 5 896 535 226 0 0 chr13 40787776 40787869 -79496443 - B1_Mur1 SINE Alu -15 134 42 5 896 334 312 0 0 chr13 40787871 40787967 -79496345 + C-rich Low_complexity Low_complexity 4 99 0 5 896 273 268 36 0 chr13 40787967 40788023 -79496289 - PB1D9 SINE Alu -61 59 2 5 896 197 330 30 69 chr13 40788040 40788141 -79496171 - L2b LINE L2 -50 3325 3229 5 896 230 280 26 13 chr13 40788385 40788461 -79495851 + ID4 SINE ID 2 78 -5 5 896 283 287 49 57 chr13 40788487 40788609 -79495703 + MT2B LTR ERVL 144 264 -337 5 896 748 142 9 0 chr13 40788531 40788644 -79495668 + B1_Mus2 SINE Alu 34 147 0 5 896 264 122 0 0 chr13 40788649 40788690 -79495622 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 896 732 270 74 5 chr13 40789344 40789534 -79494778 + B3 SINE B2 14 216 0 5 896 679 205 4 4 chr13 40789557 40789808 -79494504 + CT-rich Low_complexity Low_complexity 1 251 0 5 896 257 366 0 0 chr13 40791092 40791163 -79493149 - tRNA-Ala-GCY_ tRNA tRNA -4 71 1 5 896 1053 89 18 0 chr13 40791176 40791344 -79492968 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 5 896 889 171 0 14 chr13 40791375 40791517 -79492795 - B1_Mm SINE Alu -1 146 7 5 896 355 179 49 49 chr13 40791559 40791641 -79492671 - B1_Mur4 SINE Alu -64 86 5 5 896 21 0 0 0 chr13 40791664 40791685 -79492627 + AT_rich Low_complexity Low_complexity 1 21 0 5 896 776 251 75 0 chr13 40791685 40791708 -79492604 - B3 SINE B2 -11 205 183 5 896 197 83 28 0 chr13 40791708 40791744 -79492568 + (TATG)n Simple_repeat Simple_repeat 2 38 0 5 896 776 251 75 0 chr13 40791744 40791907 -79492405 - B3 SINE B2 -34 182 6 5 896 627 196 0 0 chr13 40791988 40792100 -79492212 - B3 SINE B2 -104 112 1 5 896 562 312 6 12 chr13 40792331 40792493 -79491819 - MER106B DNA MER1_type -897 162 2 5 896 315 0 0 0 chr13 40792591 40792626 -79491686 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 896 1281 48 0 13 chr13 40793935 40794398 -79489914 + (TG)n Simple_repeat Simple_repeat 1 456 0 5 896 615 273 21 7 chr13 40794414 40794558 -79489754 + B1_Mur1 SINE Alu 3 148 -1 5 896 342 0 0 0 chr13 40794590 40794628 -79489684 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 5 896 911 106 7 0 chr13 40794628 40794769 -79489543 + (GGGGA)n Simple_repeat Simple_repeat 5 147 0 5 896 511 160 53 11 chr13 40794836 40794931 -79489381 + B1_Mur1 SINE Alu 50 148 -1 5 896 186 133 0 0 chr13 40794931 40794961 -79489351 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 5 896 448 263 59 15 chr13 40795053 40795188 -79489124 + B1F2 SINE Alu 1 141 -8 5 896 477 0 0 0 chr13 40795694 40795747 -79488565 + (TGG)n Simple_repeat Simple_repeat 1 53 0 5 896 212 204 23 0 chr13 40797001 40797045 -79487267 + GA-rich Low_complexity Low_complexity 2 46 0 5 896 537 16 0 0 chr13 40797555 40797617 -79486695 + (TTTCC)n Simple_repeat Simple_repeat 2 63 0 5 896 547 303 73 34 chr13 40797628 40797833 -79486479 - ID_B1 SINE B4 0 224 12 5 896 321 100 0 0 chr13 40799704 40799754 -79484558 + (TCCCC)n Simple_repeat Simple_repeat 5 54 0 5 896 309 51 0 0 chr13 40801508 40801547 -79482765 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 896 22 0 0 0 chr13 40803560 40803582 -79480730 + AT_rich Low_complexity Low_complexity 1 22 0 5 896 247 296 117 33 chr13 40804031 40804338 -79479974 + RMER17D LTR ERVK 192 524 -365 5 896 207 175 0 0 chr13 40804661 40804729 -79479583 + C-rich Low_complexity Low_complexity 1 68 0 5 896 468 0 0 0 chr13 40805972 40806024 -79478288 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 896 240 35 0 0 chr13 40808241 40808270 -79476042 + (T)n Simple_repeat Simple_repeat 1 29 0 5 896 213 39 0 0 chr13 40809952 40809978 -79474334 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 896 27 29 0 0 chr13 40810675 40810709 -79473603 + AT_rich Low_complexity Low_complexity 1 34 0 6 896 267 140 0 0 chr13 40811208 40811258 -79473054 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 896 555 0 13 26 chr13 40811258 40811335 -79472977 + (GAGAA)n Simple_repeat Simple_repeat 5 80 0 6 896 25 0 0 0 chr13 40811543 40811568 -79472744 + AT_rich Low_complexity Low_complexity 1 25 0 6 896 224 180 32 16 chr13 40812414 40812476 -79471836 + G-rich Low_complexity Low_complexity 4 66 0 6 896 383 0 21 0 chr13 40813324 40813371 -79470941 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 896 698 310 20 0 chr13 40813371 40813568 -79470744 + B4A SINE B4 50 250 -42 6 896 450 0 0 0 chr13 40813651 40813701 -79470611 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 896 315 0 0 0 chr13 40814014 40814049 -79470263 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 896 297 0 0 0 chr13 40814049 40814081 -79470231 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 896 201 74 0 0 chr13 40814931 40814958 -79469354 + (CCCCCA)n Simple_repeat Simple_repeat 2 28 0 6 896 186 43 0 0 chr13 40816438 40816461 -79467851 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 6 896 288 0 0 0 chr13 40816980 40817012 -79467300 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 896 180 0 0 0 chr13 40817935 40817955 -79466357 + (C)n Simple_repeat Simple_repeat 1 20 0 6 896 318 87 0 0 chr13 40818398 40818444 -79465868 + (CGGGG)n Simple_repeat Simple_repeat 5 50 0 6 896 25 31 0 0 chr13 40820101 40820133 -79464179 + AT_rich Low_complexity Low_complexity 1 32 0 6 896 234 0 0 0 chr13 40820843 40820869 -79463443 + (T)n Simple_repeat Simple_repeat 1 26 0 6 896 258 32 0 0 chr13 40821041 40821072 -79463240 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 896 558 0 0 0 chr13 40821221 40821283 -79463029 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 896 276 53 0 0 chr13 40821283 40821320 -79462992 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 896 240 35 0 0 chr13 40822283 40822312 -79462000 + (A)n Simple_repeat Simple_repeat 1 29 0 6 896 260 70 23 0 chr13 40822430 40822473 -79461839 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 896 273 268 8 104 chr13 40822502 40822627 -79461685 + Arthur1B DNA Tip100 810 922 -303 6 896 370 0 40 0 chr13 40822806 40822856 -79461456 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 896 181 286 70 18 chr13 40823069 40823126 -79461186 - L2b LINE L2 -14 3361 3302 6 896 213 94 0 0 chr13 40824313 40824345 -79459967 + (A)n Simple_repeat Simple_repeat 1 32 0 6 896 215 151 0 54 chr13 40825469 40825525 -79458787 + A-rich Low_complexity Low_complexity 2 54 0 6 896 405 138 0 0 chr13 40825799 40825879 -79458433 + (A)n Simple_repeat Simple_repeat 1 80 0 6 896 270 136 0 0 chr13 40825879 40825923 -79458389 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 896 21 0 0 0 chr13 40826218 40826239 -79458073 + GC_rich Low_complexity Low_complexity 1 21 0 6 896 279 187 21 21 chr13 40826399 40826492 -79457820 + GA-rich Low_complexity Low_complexity 3 95 0 6 896 375 113 0 0 chr13 40827915 40827986 -79456326 + (CAGA)n Simple_repeat Simple_repeat 2 72 0 6 896 216 0 0 0 chr13 40828722 40828746 -79455566 + (T)n Simple_repeat Simple_repeat 1 24 0 6 896 459 161 17 8 chr13 40829186 40829305 -79455007 + GA-rich Low_complexity Low_complexity 2 121 0 6 896 183 156 0 0 chr13 40830696 40830728 -79453584 + CT-rich Low_complexity Low_complexity 1 32 0 6 896 315 0 0 0 chr13 40832934 40832969 -79451343 + (GA)n Simple_repeat Simple_repeat 2 36 0 6 896 252 0 0 0 chr13 40833611 40833639 -79450673 + (T)n Simple_repeat Simple_repeat 1 28 0 6 896 1045 52 8 0 chr13 40835797 40835931 -79448381 + B1_Mus1 SINE Alu 2 136 -12 6 896 809 47 9 0 chr13 40835931 40836037 -79448275 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 6 896 208 121 0 0 chr13 40836273 40836306 -79448006 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 6 896 310 250 69 0 chr13 40839136 40839208 -79445104 + ID4 SINE ID 7 83 0 6 896 403 245 39 10 chr13 40839439 40839542 -79444770 - B3A SINE B2 -84 114 9 6 896 319 217 29 0 chr13 40840771 40840840 -79443472 - PB1D9 SINE Alu 0 120 50 6 896 435 38 0 0 chr13 40840840 40840893 -79443419 + (TATG)n Simple_repeat Simple_repeat 2 54 0 6 896 794 158 36 0 chr13 40840893 40841032 -79443280 - B1_Mus1 SINE Alu -1 147 4 6 896 282 95 0 0 chr13 40841034 40841076 -79443236 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 6 896 723 215 7 26 chr13 40841098 40841251 -79443061 - B1_Mur4 SINE Alu 0 150 1 6 896 1454 79 0 11 chr13 40841463 40841654 -79442658 + B2_Mm2 SINE B2 2 190 -5 6 896 21 36 0 0 chr13 40842433 40842461 -79441851 + AT_rich Low_complexity Low_complexity 1 28 0 6 896 288 0 0 0 chr13 40843068 40843100 -79441212 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 896 402 21 0 0 chr13 40843106 40843153 -79441159 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 896 883 100 8 0 chr13 40843311 40843441 -79440871 + B1_Mus2 SINE Alu 17 147 0 6 896 224 91 23 0 chr13 40843443 40843487 -79440825 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 6 896 819 178 24 102 chr13 40843487 40843693 -79440619 + B3 SINE B2 27 216 0 6 896 465 331 48 7 chr13 40844234 40844380 -79439932 - RSINE1 SINE B4 -12 153 2 6 896 357 261 0 0 chr13 40845386 40845478 -79438834 + RSINE1 SINE B4 3 94 -71 6 896 758 29 18 37 chr13 40845468 40845577 -79438735 + B1_Mm SINE Alu 41 147 0 6 896 319 297 70 8 chr13 40845651 40845780 -79438532 - RSINE1 SINE B4 -27 138 2 6 896 597 258 38 19 chr13 40845869 40846027 -79438285 + B3A SINE B2 8 168 -30 6 896 2274 84 45 0 chr13 40846164 40846473 -79437839 + ORR1A2 LTR MaLR 5 327 0 6 896 629 300 4 118 chr13 40846522 40846760 -79437552 - ID_B1 SINE B4 -12 212 2 6 896 355 223 114 19 chr13 40846856 40846961 -79437351 - PB1D10 SINE Alu 0 117 3 6 896 450 53 0 0 chr13 40847147 40847204 -79437108 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 896 3392 112 78 62 chr13 40847219 40847814 -79436498 - RMER17B LTR ERVK 0 958 328 6 896 1230 120 38 0 chr13 40847814 40847997 -79436315 + B2_Mm1a SINE B2 1 190 -3 6 896 3392 112 78 62 chr13 40847997 40848022 -79436290 - RMER17B LTR ERVK -631 327 308 6 896 1460 60 22 6 chr13 40848022 40848205 -79436107 + B2_Mm2 SINE B2 1 186 -9 6 896 3392 112 78 62 chr13 40848205 40848217 -79436095 - RMER17B LTR ERVK -651 307 307 6 896 1240 106 67 0 chr13 40848217 40848375 -79435937 + B2_Mm1t SINE B2 3 160 -33 6 896 414 0 0 0 chr13 40848375 40848421 -79435891 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 6 896 1240 106 67 0 chr13 40848421 40848441 -79435871 + B2_Mm1t SINE B2 161 191 -2 6 896 3392 112 78 62 chr13 40848441 40848470 -79435842 - RMER17B LTR ERVK -651 307 284 6 896 271 22 87 0 chr13 40848476 40848522 -79435790 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 6 896 766 65 0 0 chr13 40848536 40848644 -79435668 - B1_Mus1 SINE Alu -4 144 37 6 896 1687 86 8 7 chr13 40848644 40848906 -79435406 - RMER17B LTR ERVK -709 249 3 6 896 545 267 26 52 chr13 40849009 40849163 -79435149 + B4A SINE B4 143 292 0 6 896 400 63 0 0 chr13 40849386 40849449 -79434863 - B2_Mm1a SINE B2 -4 189 127 6 896 979 110 0 0 chr13 40849477 40849622 -79434690 - B2_Mm2 SINE B2 -47 148 4 6 896 184 361 68 0 chr13 40850254 40850387 -79433925 + MIR3 SINE MIR 38 179 -29 6 896 800 136 82 97 chr13 40850794 40850990 -79433322 - B2_Mm2 SINE B2 -2 193 1 6 896 698 144 96 29 chr13 40851125 40851261 -79433051 + B1_Mus2 SINE Alu 3 147 0 6 896 240 35 0 0 chr13 40851401 40851430 -79432882 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 6 896 207 0 0 0 chr13 40851432 40851455 -79432857 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 896 1101 79 0 0 chr13 40851455 40851594 -79432718 - B1_Mus1 SINE Alu -9 139 1 6 896 324 267 133 65 chr13 40851964 40852288 -79432024 + ORR1D2 LTR MaLR 19 364 -6 6 896 248 370 20 14 chr13 40852710 40852858 -79431454 - MLT1B LTR MaLR -32 358 210 6 896 309 337 10 10 chr13 40852902 40853001 -79431311 - PB1D10 SINE Alu -18 99 1 6 896 192 152 0 0 chr13 40853075 40853108 -79431204 + CT-rich Low_complexity Low_complexity 2 34 0 6 896 434 82 71 0 chr13 40853909 40854007 -79430305 + GA-rich Low_complexity Low_complexity 2 106 0 6 896 316 261 40 67 chr13 40854116 40854283 -79430029 + Lx9 LINE L1 5524 5729 -571 6 896 2435 72 25 3 chr13 40854283 40854603 -79429709 - ORR1A2 LTR MaLR 0 327 1 6 896 316 259 9 87 chr13 40854603 40854659 -79429653 + Lx9 LINE L1 5697 5754 -546 6 896 561 288 18 18 chr13 40854725 40854888 -79429424 - RSINE1 SINE B4 0 165 3 6 896 213 226 0 0 chr13 40855843 40855896 -79428416 + GA-rich Low_complexity Low_complexity 4 56 0 6 896 414 85 0 0 chr13 40856012 40856071 -79428241 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 896 246 192 0 0 chr13 40856072 40856124 -79428188 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 896 1083 152 48 21 chr13 40856157 40856345 -79427967 - B2_Mm2 SINE B2 -1 194 2 6 896 517 91 0 0 chr13 40856347 40856424 -79427888 - B1_Mur4 SINE Alu -1 149 73 6 896 910 284 60 46 chr13 40856466 40856660 -79427652 + L1_Rod LINE L1 2801 2998 -2849 6 896 210 71 0 0 chr13 40856660 40856688 -79427624 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 6 896 910 284 60 46 chr13 40856688 40856772 -79427540 + L1_Rod LINE L1 2999 3074 -2773 6 896 880 143 29 0 chr13 40856772 40856912 -79427400 + B1_Mus2 SINE Alu 4 147 0 6 896 1514 58 0 0 chr13 40856921 40857110 -79427202 + B2_Mm1a SINE B2 2 190 -3 6 896 910 284 60 46 chr13 40857110 40857492 -79426820 + L1_Rod LINE L1 3081 3481 -2366 6 896 960 280 158 16 chr13 40857509 40857689 -79426623 + L1_Mur3 LINE L1 4153 4335 -1545 6 896 1259 108 0 67 chr13 40857689 40857898 -79426414 + B2_Mm2 SINE B2 1 195 0 7 896 960 280 158 16 chr13 40857898 40858203 -79426109 + L1_Mur3 LINE L1 4336 4707 -1173 6 896 814 260 35 0 chr13 40858218 40858418 -79425894 + B3 SINE B2 8 214 -2 7 896 830 284 46 9 chr13 40858432 40858734 -79425578 + L1M2 LINE L1 4767 5081 -1065 7 896 1087 256 189 20 chr13 40858731 40859169 -79425143 + Lx8 LINE L1 6815 7326 -147 7 896 513 47 0 0 chr13 40859344 40859408 -79424904 + (TC)n Simple_repeat Simple_repeat 1 64 0 7 896 300 367 58 0 chr13 40859467 40859587 -79424725 - MLT1J LTR MaLR -145 367 241 7 896 242 374 0 11 chr13 40859751 40859774 -79424538 - ID_B1 SINE B4 -31 193 103 7 896 285 294 0 14 chr13 40859774 40859843 -79424469 - PB1D10 SINE Alu -28 89 22 7 896 2184 164 18 62 chr13 40860171 40860695 -79423617 - RLTR31A_Mm LTR ERVK 0 561 3 7 896 1165 225 85 14 chr13 40860700 40860993 -79423319 + MTEa LTR MaLR 64 377 -2 7 896 1362 62 0 0 chr13 40861314 40861491 -79422821 + (GGAGA)n Simple_repeat Simple_repeat 2 178 0 7 896 805 215 0 0 chr13 40861636 40861780 -79422532 + B1_Mur4 SINE Alu 1 144 -6 7 896 335 109 0 18 chr13 40861800 40861856 -79422456 + RLTR15 LTR ERVK 1 55 -304 7 896 1666 261 33 39 chr13 40861861 40862371 -79421941 + MYSERV16_I-int LTR ERVK 390 896 -1430 7 896 252 274 157 45 chr13 40862371 40862505 -79421807 + RMER4A LTR ERVK 287 435 -31 7 896 1450 33 43 16 chr13 40862534 40862696 -79421616 + B2_Mm1a SINE B2 2 160 -33 7 896 207 0 0 0 chr13 40862696 40862719 -79421593 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 7 896 1450 33 43 16 chr13 40862719 40862742 -79421570 + B2_Mm1a SINE B2 161 191 -2 7 896 303 29 0 0 chr13 40862742 40862776 -79421536 - L1_Mus2 LINE L1 -571 5995 5962 7 896 944 18 9 0 chr13 40862777 40862891 -79421421 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 7 896 1003 189 12 113 chr13 40862891 40863032 -79421280 + MYSERV16_I-int LTR ERVK 1056 1177 -1149 7 896 1140 58 0 0 chr13 40863032 40863171 -79421141 - B1_Mus1 SINE Alu -8 140 2 7 896 1003 189 12 113 chr13 40863171 40863375 -79420937 + MYSERV16_I-int LTR ERVK 1178 1366 -960 7 896 267 104 0 0 chr13 40863376 40863424 -79420888 + (T)n Simple_repeat Simple_repeat 1 48 0 7 896 964 47 0 0 chr13 40863424 40863552 -79420760 - B1_Mus2 SINE Alu 0 147 20 7 896 3471 217 51 17 chr13 40863633 40864478 -79419834 + MYSERV-int LTR ERVK 5675 6548 -2 7 896 1912 137 21 79 chr13 40864479 40864860 -79419452 + RLTR15 LTR ERVK 1 359 0 7 896 1204 88 76 0 chr13 40864881 40865052 -79419260 - B2_Mm2 SINE B2 -10 185 2 7 896 326 281 0 0 chr13 40865097 40865179 -79419133 + ID4 SINE ID 1 82 -1 7 896 180 77 0 0 chr13 40865708 40865734 -79418578 + (CAGAGA)n Simple_repeat Simple_repeat 6 31 0 7 896 683 157 0 0 chr13 40865895 40866003 -79418309 + PB1D9 SINE Alu 3 110 -10 7 896 339 210 37 12 chr13 40866443 40866525 -79417787 + L1MA9 LINE L1 6197 6280 -32 7 896 1101 180 20 5 chr13 40866650 40866845 -79417467 - Lx8 LINE L1 -480 6993 6796 7 896 326 194 60 0 chr13 40867049 40867116 -79417196 + ID4_ SINE ID 1 71 -12 7 896 370 279 105 37 chr13 40867293 40867513 -79416799 - B4A SINE B4 -20 272 46 7 896 389 108 0 209 chr13 40867501 40867545 -79416767 + ORR1B1 LTR MaLR 312 349 -45 7 896 3121 52 0 0 chr13 40867545 40867930 -79416382 + L1Md_F2 LINE L1 6198 6582 0 7 896 389 108 0 209 chr13 40867930 40867990 -79416322 + ORR1B1 LTR MaLR 350 394 0 7 896 547 227 9 0 chr13 40867990 40868098 -79416214 + RSINE1 SINE B4 22 130 -35 7 896 217 233 0 0 chr13 40868133 40868176 -79416136 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 896 406 331 61 11 chr13 40868304 40868484 -79415828 - MLT1A0 LTR MaLR -3 362 174 7 896 2040 138 3 44 chr13 40868866 40869206 -79415106 + ORR1A3 LTR MaLR 1 326 0 7 896 3637 192 89 18 chr13 40869206 40870140 -79414172 + ORR1A3-int LTR MaLR 1 1000 -963 7 896 429 247 154 21 chr13 40870193 40870433 -79413879 + RLTR10A LTR ERVK 140 411 0 7 896 5321 122 36 50 chr13 40870433 40871418 -79412894 + ORR1A3-int LTR MaLR 993 1963 0 7 896 957 178 81 50 chr13 40871418 40871786 -79412526 + ORR1A3 LTR MaLR 1 379 0 7 896 1155 68 7 0 chr13 40872088 40872234 -79412078 + B1_Mus2 SINE Alu 1 147 0 7 896 4505 12 2 0 chr13 40872262 40872754 -79411558 + MT2_Mm LTR ERVL 1 493 0 7 896 774 242 107 42 chr13 40872775 40873038 -79411274 - B4 SINE B4 0 292 13 7 896 211 264 0 36 chr13 40872996 40873051 -79411261 - ID4 SINE ID -29 54 2 7 896 373 309 36 7 chr13 40873064 40873204 -79411108 - B1F SINE Alu -5 144 1 7 896 1847 246 29 105 chr13 40874597 40875216 -79409096 + Lx8 LINE L1 6902 7473 0 7 896 1044 137 0 0 chr13 40875393 40875561 -79408751 + URR1A DNA MER1_type 58 225 -1 7 896 232 271 131 0 chr13 40876343 40876450 -79407862 + L1M3 LINE L1 4357 4477 -1663 7 896 311 102 20 0 chr13 40876578 40876627 -79407685 - MT2B LTR ERVL 0 584 535 7 896 468 169 38 8 chr13 40876638 40876769 -79407543 + (TA)n Simple_repeat Simple_repeat 2 136 0 7 896 204 143 62 31 chr13 40876788 40876853 -79407459 + (TA)n Simple_repeat Simple_repeat 1 67 0 7 896 1186 204 61 61 chr13 40876854 40877249 -79407063 - MT2B LTR ERVL -47 554 3 7 896 310 194 27 14 chr13 40877339 40877412 -79406900 + B4A SINE B4 128 201 -91 7 896 925 299 40 51 chr13 40877414 40877497 -79406815 - ORR1D2 LTR MaLR 0 370 289 7 896 1963 112 17 75 chr13 40877497 40877846 -79406466 - ORR1A4 LTR MaLR 0 329 1 7 896 925 299 40 51 chr13 40877846 40878136 -79406176 - ORR1D2 LTR MaLR -82 288 1 7 896 441 116 0 0 chr13 40878208 40878277 -79406035 + (CA)n Simple_repeat Simple_repeat 1 69 0 7 896 1767 228 45 179 chr13 40878286 40878991 -79405321 - RMER19C LTR ERVK 0 611 1 7 896 531 274 64 5 chr13 40879081 40879268 -79405044 + L1MB2 LINE L1 5962 6159 -12 7 896 209 223 10 31 chr13 40879958 40880055 -79404257 + CT-rich Low_complexity Low_complexity 1 95 0 7 896 392 266 7 105 chr13 40880377 40880520 -79403792 + RMER30 DNA MER1_type 30 158 -44 7 896 489 144 0 0 chr13 40880783 40880873 -79403439 + (TC)n Simple_repeat Simple_repeat 2 91 0 7 896 306 241 84 0 chr13 40880876 40880959 -79403353 - B3 SINE B2 -1 215 126 7 896 955 149 57 92 chr13 40880964 40881193 -79403119 - URR1B DNA MER1_type -3 222 2 7 896 503 171 114 0 chr13 40881193 40881297 -79403015 - B3 SINE B2 -99 117 2 7 896 246 218 0 0 chr13 40881712 40881767 -79402545 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 896 485 330 29 36 chr13 40882249 40882529 -79401783 + B4A SINE B4 3 280 -12 7 896 192 125 0 0 chr13 40882554 40882586 -79401726 + (CATA)n Simple_repeat Simple_repeat 4 35 0 7 896 281 324 57 0 chr13 40882752 40882857 -79401455 + PB1D7 SINE Alu 1 111 -9 7 896 307 191 154 22 chr13 40883239 40883330 -79400982 + B1_Mur2 SINE Alu 45 147 -2 7 896 744 268 98 82 chr13 40883757 40884036 -79400276 + ORR1E LTR MaLR 4 328 -51 7 896 2395 98 3 12 chr13 40884036 40884368 -79399944 + ORR1A4 LTR MaLR 1 329 0 7 896 231 61 0 0 chr13 40884375 40884408 -79399904 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 7 896 1247 28 7 0 chr13 40884417 40884562 -79399750 - B1_Mm SINE Alu -1 146 1 7 896 414 240 64 162 chr13 40884562 40884619 -79399693 + ORR1E LTR MaLR 335 379 0 7 896 574 250 44 0 chr13 40885093 40885229 -79399083 + ID_B1 SINE B4 80 221 -3 7 896 870 135 148 13 chr13 40885492 40885701 -79398611 - MTD LTR MaLR -14 405 172 7 896 225 289 73 88 chr13 40885844 40886024 -79398288 + RMER17C LTR ERVK 118 289 -121 7 896 216 0 0 0 chr13 40886024 40886048 -79398264 + (GCATG)n Simple_repeat Simple_repeat 2 25 0 7 896 225 289 73 88 chr13 40886048 40886140 -79398172 + RMER17C LTR ERVK 290 385 -25 7 896 492 209 209 0 chr13 40886127 40886261 -79398051 - MTD LTR MaLR -234 185 24 7 896 365 317 0 29 chr13 40886269 40886373 -79397939 + RSINE1 SINE B4 42 142 -23 7 896 434 309 7 7 chr13 40886659 40886796 -79397516 + B1F1 SINE Alu 3 139 -10 7 896 574 315 24 79 chr13 40886914 40887166 -79397146 - B4A SINE B4 0 292 55 7 896 297 312 104 0 chr13 40887516 40887612 -79396700 - B1F SINE Alu -20 129 24 7 896 1592 158 46 1 chr13 40887776 40888115 -79396197 + ORR1B1 LTR MaLR 2 386 -8 7 896 1376 165 106 24 chr13 40888119 40888449 -79395863 + ORR1B1-int LTR MaLR 1 357 -901 7 896 720 75 9 0 chr13 40888447 40888554 -79395758 - ORR1B1 LTR MaLR -286 108 1 7 896 577 168 9 0 chr13 40888555 40888668 -79395644 - MTB_Mm LTR MaLR -288 119 6 7 896 592 117 175 0 chr13 40888673 40888810 -79395502 - MTB_Mm-int LTR MaLR 0 1258 1098 7 896 22 0 0 0 chr13 40889195 40889217 -79395095 + AT_rich Low_complexity Low_complexity 1 22 0 7 896 421 137 0 27 chr13 40889226 40889301 -79395011 - B1_Mur1 SINE Alu 0 149 77 7 896 253 242 30 15 chr13 40889322 40889389 -79394923 - PB1D10 SINE Alu -1 116 49 7 896 1167 253 142 23 chr13 40889489 40889955 -79394357 - RMER4B LTR ERVK -11 574 17 7 896 540 92 0 13 chr13 40889963 40890040 -79394272 - MurERV4-int LTR ERVK 0 5260 5185 7 896 2408 234 37 4 chr13 40890102 40890613 -79393699 - MurERV4-int LTR ERVK -3525 1735 1208 7 896 2086 130 274 2 chr13 40890614 40891115 -79393197 - RMER6C LTR ERVK -52 638 2 7 896 502 259 59 18 chr13 40891175 40891344 -79392968 - L1MA9 LINE L1 -7 6305 6130 7 896 1655 156 0 11 chr13 40892039 40892318 -79391994 - MYSERV6-int LTR ERVK -5409 3550 3275 7 896 1951 84 3 66 chr13 40892318 40892623 -79391689 + ORR1A2 LTR MaLR 1 286 -41 7 896 909 86 152 6 chr13 40892620 40892784 -79391528 + B2_Mm1t SINE B2 6 193 0 7 896 4877 32 0 5 chr13 40892790 40893362 -79390950 + L1Md_F2 LINE L1 6014 6582 0 7 896 186 133 0 0 chr13 40893369 40893399 -79390913 + (A)n Simple_repeat Simple_repeat 1 30 0 7 896 416 73 0 0 chr13 40893400 40893455 -79390857 + ORR1A2 LTR MaLR 272 326 0 7 13 11635 221 30 35 chr13 40893455 40895176 -79389136 - MYSERV6-int LTR ERVK -5680 3279 1612 7 897 278 47 0 44 chr13 40895176 40895221 -79389091 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 897 11635 221 30 35 chr13 40895221 40896260 -79388052 - MYSERV6-int LTR ERVK -7348 1611 532 7 897 6938 126 21 2 chr13 40896260 40897324 -79386988 + L1_Mur2 LINE L1 3978 5061 -816 7 897 589 297 130 14 chr13 40898119 40898338 -79385974 - RLTR12B LTR ERVK -16 512 290 7 897 789 67 0 0 chr13 40898338 40898442 -79385870 + (TC)n Simple_repeat Simple_repeat 2 105 0 7 897 589 297 130 14 chr13 40898442 40898577 -79385735 - RLTR12B LTR ERVK -239 289 118 7 897 252 0 0 0 chr13 40899354 40899382 -79384930 + (T)n Simple_repeat Simple_repeat 1 28 0 7 897 1072 64 43 0 chr13 40899382 40899523 -79384789 - B1_Mus1 SINE Alu 0 148 2 7 897 2063 159 27 11 chr13 40899629 40899998 -79384314 + ORR1C1 LTR MaLR 3 377 -1 7 897 3644 217 50 39 chr13 40899998 40900954 -79383358 + ORR1C1-int LTR MaLR 14 980 -390 7 897 1696 31 0 0 chr13 40901116 40901308 -79383004 - B2_Mm1a SINE B2 0 193 2 7 897 525 345 18 5 chr13 40901340 40901584 -79382728 + MLT2B4 LTR ERVL 13 269 -246 7 897 310 294 71 8 chr13 40901575 40901702 -79382610 + MLT2B4 LTR ERVL 380 514 -42 7 897 664 299 95 4 chr13 40901730 40901992 -79382320 - MER2 DNA MER2_type -59 286 1 8 897 506 321 73 64 chr13 40902001 40902424 -79381888 + ERVL-B4-int LTR ERVL 14 440 -5317 8 897 529 356 35 4 chr13 40902435 40902666 -79381646 + ERVL-B4-int LTR ERVL 469 706 -5008 8 897 208 181 35 24 chr13 40903015 40903100 -79381212 + CT-rich Low_complexity Low_complexity 2 87 0 8 897 239 207 35 0 chr13 40903491 40903549 -79380763 + (CGTG)n Simple_repeat Simple_repeat 2 61 0 8 897 1269 76 114 67 chr13 40903648 40903778 -79380534 + RLTR47_MM LTR ERV1 1 143 -389 8 897 1063 61 0 64 chr13 40903778 40903935 -79380377 + B1_Mus2 SINE Alu 1 147 0 8 897 1269 76 114 67 chr13 40903935 40904059 -79380253 + RLTR47_MM LTR ERV1 144 267 -265 8 897 4576 146 47 69 chr13 40904061 40904781 -79379531 + L1Md_F2 LINE L1 213 980 -5744 8 897 1129 75 0 0 chr13 40904781 40904927 -79379385 + B1_Mm SINE Alu 2 147 0 8 897 32636 64 4 66 chr13 40904927 40909312 -79375000 + L1Md_F2 LINE L1 957 5205 -678 8 897 929 107 101 0 chr13 40909312 40909461 -79374851 + B2_Mm1t SINE B2 2 165 -28 8 897 32636 64 4 66 chr13 40909461 40909558 -79374754 + L1Md_F2 LINE L1 5206 5299 -584 8 897 234 82 137 39 chr13 40909558 40909609 -79374703 + B2_Mm2 SINE B2 132 187 -8 8 897 32636 64 4 66 chr13 40909609 40909903 -79374409 + L1Md_F2 LINE L1 5300 5586 -297 8 897 7600 71 8 5 chr13 40909903 40910894 -79373418 + L1Md_F2 LINE L1 5587 6580 -2 8 897 1194 100 104 100 chr13 40910911 40911021 -79373291 + RLTR47_MM LTR ERV1 253 354 -178 8 897 216 0 0 0 chr13 40911028 40911052 -79373260 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 897 1074 89 0 14 chr13 40911052 40911192 -79373120 - B1_Mus1 SINE Alu -9 139 1 8 897 1194 100 104 100 chr13 40911192 40911360 -79372952 + RLTR47_MM LTR ERV1 355 532 0 8 897 903 26 8 0 chr13 40911852 40911969 -79372343 - B1_Mus2 SINE Alu -1 146 29 8 897 2625 180 69 7 chr13 40912884 40913449 -79370863 - RLTR25B LTR ERVK -405 623 24 8 897 600 14 0 0 chr13 40913779 40913848 -79370464 + (TC)n Simple_repeat Simple_repeat 2 70 0 8 897 251 207 69 0 chr13 40913858 40913916 -79370396 - RLTR6-int LTR ERV1 -291 7487 7426 8 897 4035 231 91 65 chr13 40913943 40914347 -79369965 - RLTR19-int LTR ERVK -308 5829 5447 8 897 1176 82 0 0 chr13 40914347 40914494 -79369818 + B1_Mm SINE Alu 1 147 0 8 897 4035 231 91 65 chr13 40914494 40915517 -79368795 - RLTR19-int LTR ERVK -691 5446 4365 8 897 299 339 25 8 chr13 40915414 40915575 -79368737 - MuLV-int LTR ERV1 -2033 5523 5400 8 897 572 331 94 7 chr13 40915698 40916115 -79368197 - MuLV-int LTR ERV1 -2299 5307 4768 8 897 632 317 29 12 chr13 40916481 40916724 -79367588 - MuLV-int LTR ERV1 -3156 4450 4204 8 897 306 299 75 75 chr13 40916800 40917039 -79367273 - MuLV-int LTR ERV1 -3504 3948 3710 8 897 978 96 7 0 chr13 40917061 40917207 -79367105 + B1_Mus1 SINE Alu 2 148 0 8 897 229 89 22 22 chr13 40917207 40917253 -79367059 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 8 897 1186 319 103 60 chr13 40917259 40918737 -79365575 - MuLV-int LTR ERV1 -3813 3793 2071 8 897 563 251 144 5 chr13 40918843 40919051 -79365261 - RLTR19-int LTR ERVK -5895 242 6 8 897 849 256 174 57 chr13 40919051 40919415 -79364897 - RLTR19 LTR ERVK -9 490 77 8 897 288 0 0 0 chr13 40919415 40919447 -79364865 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 897 849 256 174 57 chr13 40919447 40919501 -79364811 - RLTR19 LTR ERVK -423 76 23 8 897 2272 108 6 9 chr13 40919802 40920128 -79364184 + ORR1A2 LTR MaLR 1 325 -2 8 897 411 291 24 60 chr13 40920132 40920300 -79364012 + RLTR42-int LTR ERVK 1236 1397 -4125 8 897 948 173 0 0 chr13 40920510 40920689 -79363623 + GA-rich Low_complexity Low_complexity 2 180 0 8 897 596 225 92 8 chr13 40920747 40920920 -79363392 + B3 SINE B2 30 213 -3 8 897 722 147 6 66 chr13 40921083 40921224 -79363088 + B2_Mm2 SINE B2 15 147 -48 8 897 423 0 0 0 chr13 40921224 40921271 -79363041 + (CATA)n Simple_repeat Simple_repeat 1 47 0 8 897 722 147 6 66 chr13 40921271 40921296 -79363016 + B2_Mm2 SINE B2 148 170 -25 8 897 381 239 82 33 chr13 40921771 40922010 -79362302 - RMER20A LTR ERVK -432 428 176 8 897 826 242 81 14 chr13 40922774 40922984 -79361328 + ID_B1 SINE B4 1 224 0 8 897 559 289 62 52 chr13 40923182 40923470 -79360842 + B4A SINE B4 2 292 0 8 897 306 220 0 0 chr13 40923535 40923594 -79360718 - ID_B1 SINE B4 -23 201 143 8 897 225 0 0 0 chr13 40923605 40923630 -79360682 + (A)n Simple_repeat Simple_repeat 1 25 0 8 897 2349 108 25 81 chr13 40924104 40924549 -79359763 + RLTR23 LTR ERV1 11 430 0 8 897 4329 39 2 10 chr13 40924626 40925142 -79359170 + RLTR1B LTR ERV1 1 512 0 8 897 460 254 23 8 chr13 40925175 40925306 -79359006 + ID_B1 SINE B4 66 198 -26 8 897 297 197 15 0 chr13 40925309 40925375 -79358937 + L1M3 LINE L1 5594 5660 -520 8 897 210 162 0 0 chr13 40925505 40925542 -79358770 + T-rich Low_complexity Low_complexity 1 37 0 8 897 38333 18 2 7 chr13 40926933 40932112 -79352200 + L1Md_T LINE L1 440 5586 -297 8 897 8586 32 0 1 chr13 40932112 40933109 -79351203 + L1Md_T LINE L1 5587 6582 0 8 897 462 254 23 0 chr13 40933235 40933365 -79350947 + ID_B1 SINE B4 66 198 -26 8 897 245 119 24 0 chr13 40933368 40933410 -79350902 + L1M4 LINE L1 5594 5636 -538 8 897 2024 54 4 7 chr13 40933426 40933704 -79350608 - RLTR1B LTR ERV1 -80 432 156 8 897 682 97 0 0 chr13 40934141 40934244 -79350068 - MT2C_Mm LTR ERVL -82 393 291 8 897 1526 152 156 69 chr13 40934616 40934669 -79349643 - ORR1C1 LTR MaLR -1 377 335 8 897 1156 62 7 0 chr13 40934669 40934814 -79349498 - B1_Mus1 SINE Alu -1 147 2 8 897 1526 152 156 69 chr13 40934814 40934956 -79349356 - ORR1C1 LTR MaLR -44 334 164 8 897 315 49 0 0 chr13 40934956 40934997 -79349315 + (CAGA)n Simple_repeat Simple_repeat 1 41 0 8 897 1526 152 156 69 chr13 40934997 40935147 -79349165 - ORR1C1 LTR MaLR -215 163 1 8 897 1435 94 5 0 chr13 40935864 40936056 -79348256 - B2_Mm1a SINE B2 0 193 1 8 897 466 263 14 55 chr13 40936195 40936340 -79347972 - B1_Mur1 SINE Alu -5 144 6 8 897 700 286 37 18 chr13 40936374 40936591 -79347721 + ID_B1 SINE B4 1 221 -3 8 897 243 0 0 0 chr13 40937544 40937571 -79346741 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 897 279 282 13 0 chr13 40937584 40937662 -79346650 - ID2 SINE ID -2 81 3 8 897 207 0 0 0 chr13 40937843 40937866 -79346446 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 8 897 452 206 82 0 chr13 40937881 40937978 -79346334 - B1_Mur3 SINE Alu -1 148 44 8 897 265 123 79 95 chr13 40937923 40937986 -79346326 - MT2B LTR ERVL -343 258 197 8 897 187 190 17 17 chr13 40937986 40938045 -79346267 + CT-rich Low_complexity Low_complexity 3 61 0 8 897 435 119 0 0 chr13 40938045 40938112 -79346200 + (TTCA)n Simple_repeat Simple_repeat 3 69 0 8 897 916 59 176 0 chr13 40938114 40938250 -79346062 - B2_Mm2 SINE B2 -34 161 2 8 897 246 208 0 0 chr13 40938255 40938308 -79346004 + CT-rich Low_complexity Low_complexity 3 55 0 8 897 534 131 159 0 chr13 40938538 40938645 -79345667 - RLTR19 LTR ERVK 0 499 376 8 897 1116 75 0 20 chr13 40938645 40938784 -79345528 + B1_Mus1 SINE Alu 2 140 -8 8 897 456 51 0 0 chr13 40938784 40938843 -79345469 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 897 802 146 35 7 chr13 40939171 40939201 -79345111 - MTD LTR MaLR 0 419 390 8 897 1869 178 29 29 chr13 40939201 40939583 -79344729 - RLTR14 LTR ERV1 0 382 1 8 897 802 246 109 28 chr13 40939583 40939919 -79344393 - MTD LTR MaLR -30 389 2 8 897 234 327 110 18 chr13 40940231 40940340 -79343972 + PB1 SINE Alu 2 120 -7 8 897 439 290 38 0 chr13 40940358 40940489 -79343823 + B1F SINE Alu 13 148 -1 8 897 615 197 39 23 chr13 40940510 40940640 -79343672 + B1_Mus1 SINE Alu 6 137 -11 8 897 228 258 30 0 chr13 40940642 40940708 -79343604 + GA-rich Low_complexity Low_complexity 1 68 0 8 897 481 254 48 21 chr13 40940966 40941155 -79343157 + MYSERV-int LTR ERVK 5370 5563 -987 8 897 315 0 0 0 chr13 40941155 40941190 -79343122 + (TTAG)n Simple_repeat Simple_repeat 4 38 0 8 897 382 123 173 0 chr13 40941767 40941876 -79342436 - B2_Mm2 SINE B2 -2 193 46 8 897 1016 100 106 0 chr13 40941888 40942048 -79342264 - B2_Mm1t SINE B2 -14 179 3 8 897 207 232 0 0 chr13 40942957 40943013 -79341299 + (TG)n Simple_repeat Simple_repeat 2 57 0 8 897 429 95 0 0 chr13 40943034 40943097 -79341215 + (TA)n Simple_repeat Simple_repeat 1 63 0 8 897 447 194 0 0 chr13 40943223 40943326 -79340986 + (TCTA)n Simple_repeat Simple_repeat 4 106 0 8 897 351 0 0 0 chr13 40943915 40943954 -79340358 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 897 442 186 117 10 chr13 40943955 40944058 -79340254 - B1_Mus2 SINE Alu -12 135 22 8 897 3008 86 7 5 chr13 40944076 40944496 -79339816 + BGLII LTR ERVK 1 421 0 8 897 680 173 58 109 chr13 40944526 40944682 -79339630 + B1_Mur3 SINE Alu 2 149 0 8 897 208 178 22 0 chr13 40944697 40944742 -79339570 + GA-rich Low_complexity Low_complexity 2 47 0 8 897 400 311 117 49 chr13 40944742 40945006 -79339306 - L1M5 LINE L1 -482 5642 5361 8 897 220 104 69 38 chr13 40945114 40945249 -79339063 + (CA)n Simple_repeat Simple_repeat 1 139 0 8 897 324 308 45 70 chr13 40945254 40945338 -79338974 + HAL1-3A_ME LINE L1 1975 2057 -801 8 897 1445 93 0 5 chr13 40945338 40945532 -79338780 + B2_Mm2 SINE B2 1 193 -2 8 897 324 308 45 70 chr13 40945532 40945604 -79338708 + HAL1-3A_ME LINE L1 2058 2127 -731 8 897 1655 36 0 0 chr13 40945696 40945888 -79338424 + B2_Mm1a SINE B2 2 193 0 8 897 225 0 0 0 chr13 40946075 40946100 -79338212 + (T)n Simple_repeat Simple_repeat 1 25 0 8 897 954 239 0 19 chr13 40946202 40946407 -79337905 + B3 SINE B2 2 202 -14 8 897 1451 199 112 44 chr13 40946775 40947185 -79337127 + RMER10A LTR ERVL 3 440 -2 8 897 496 77 0 25 chr13 40947185 40947265 -79337047 + (TTTC)n Simple_repeat Simple_repeat 1 78 0 8 897 663 191 113 7 chr13 40948324 40948466 -79335846 + RSINE1 SINE B4 2 158 -7 8 897 630 122 0 0 chr13 40948614 40948712 -79335600 + (TTTC)n Simple_repeat Simple_repeat 4 101 0 8 897 279 254 22 49 chr13 40948712 40948820 -79335492 - PB1D9 SINE Alu 0 120 14 8 897 1350 260 68 18 chr13 40949189 40949588 -79334724 + MTD LTR MaLR 1 419 0 8 897 183 42 0 0 chr13 40950399 40950423 -79333889 + (T)n Simple_repeat Simple_repeat 1 24 0 8 897 21 0 0 0 chr13 40950824 40950845 -79333467 + AT_rich Low_complexity Low_complexity 1 21 0 8 897 827 249 55 15 chr13 40951025 40951225 -79333087 + B3 SINE B2 9 216 0 8 897 537 268 65 72 chr13 40951275 40951428 -79332884 - RSINE1 SINE B4 -2 163 12 8 897 1233 54 0 0 chr13 40951570 40951717 -79332595 - B1_Mus2 SINE Alu 0 147 1 8 897 2058 164 55 84 chr13 40951721 40952195 -79332117 - RMER6B LTR ERVK 0 461 2 8 897 180 0 0 0 chr13 40952597 40952617 -79331695 + (CCCCCG)n Simple_repeat Simple_repeat 5 24 0 8 897 450 285 76 7 chr13 40953013 40953158 -79331154 - RSINE1 SINE B4 -10 155 1 9 897 254 290 43 0 chr13 40953183 40953252 -79331060 - ID4 SINE ID 0 83 12 9 897 243 0 0 0 chr13 40953739 40953766 -79330546 + (TG)n Simple_repeat Simple_repeat 2 28 0 9 897 904 97 8 0 chr13 40954315 40954439 -79329873 - B2_Mm1t SINE B2 -67 126 2 9 897 844 138 30 8 chr13 40954442 40954573 -79329739 - B1_Mur4 SINE Alu -1 149 16 9 897 405 208 18 114 chr13 40954477 40954591 -79329721 - MT2B LTR ERVL -337 264 162 9 897 254 281 42 63 chr13 40956690 40956785 -79327527 - PB1D10 SINE Alu -2 115 23 9 897 671 217 0 40 chr13 40956874 40957023 -79327289 - B1_Mus2 SINE Alu 0 147 5 9 897 1449 54 5 5 chr13 40957064 40957249 -79327063 + B2_Mm2 SINE B2 2 186 -9 9 897 604 287 132 40 chr13 40957306 40957775 -79326537 - L1MA7 LINE L1 -5 6286 5775 9 897 477 285 15 51 chr13 40958007 40958144 -79326168 + B1_Mur1 SINE Alu 2 133 -16 9 897 679 246 56 41 chr13 40958176 40958371 -79325941 + B3A SINE B2 1 198 0 9 897 349 283 81 0 chr13 40958483 40958582 -79325730 + ID_B1 SINE B4 89 195 -29 9 897 307 256 77 70 chr13 40958741 40958822 -79325490 - L1MDa LINE L1 -4119 2514 2438 9 897 938 162 14 0 chr13 40958822 40958970 -79325342 - B1_Mur4 SINE Alu 0 150 1 9 897 307 256 77 70 chr13 40958970 40959031 -79325281 - L1MDa LINE L1 -4196 2437 2371 9 897 305 219 49 110 chr13 40959135 40959217 -79325095 + MT2B LTR ERVL 164 240 -361 9 897 807 179 0 0 chr13 40959150 40959273 -79325039 + B1_Mur1 SINE Alu 19 141 -8 9 897 233 301 125 10 chr13 40959442 40959546 -79324766 + LTR48 LTR ERV1 42 157 -630 9 897 333 313 0 20 chr13 40959776 40959877 -79324435 - MLT1A1 LTR MaLR -279 129 31 9 897 185 83 0 27 chr13 40960444 40960481 -79323831 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 9 897 727 201 27 14 chr13 40960488 40960634 -79323678 - B1_Mur1 SINE Alu 0 149 2 9 897 26 30 0 0 chr13 40961102 40961135 -79323177 + AT_rich Low_complexity Low_complexity 1 33 0 9 897 707 236 57 57 chr13 40961154 40961347 -79322965 + B3A SINE B2 1 193 -5 9 897 352 199 22 31 chr13 40961444 40961546 -79322766 + B4 SINE B4 10 105 -187 9 897 2104 181 90 40 chr13 40961555 40962023 -79322289 - RMER16 LTR ERVK 0 533 1 9 897 373 280 10 29 chr13 40962043 40962146 -79322166 + B4 SINE B4 150 250 -42 9 897 189 121 0 0 chr13 40962330 40962363 -79321949 + (TTAA)n Simple_repeat Simple_repeat 1 33 0 9 897 789 161 73 0 chr13 40962363 40962500 -79321812 - B1_Mur3 SINE Alu -2 147 1 9 897 182 91 0 29 chr13 40962527 40962547 -79321765 + (TTTC)n Simple_repeat Simple_repeat 3 22 0 9 897 1242 35 0 0 chr13 40962547 40962689 -79321623 - B1_Mus1 SINE Alu -6 142 1 9 897 182 91 0 29 chr13 40962689 40962702 -79321610 + (TTTC)n Simple_repeat Simple_repeat 2 14 0 9 897 1366 82 16 5 chr13 40962769 40962954 -79321358 + B2_Mm2 SINE B2 1 187 -8 9 897 446 70 0 0 chr13 40962963 40963020 -79321292 + (GGA)n Simple_repeat Simple_repeat 3 59 0 9 897 779 186 6 0 chr13 40963021 40963182 -79321130 + GA-rich Low_complexity Low_complexity 4 165 0 9 897 385 242 3 13 chr13 40963196 40963284 -79321028 + RSINE1 SINE B4 4 90 -202 9 897 22 56 0 0 chr13 40963294 40963330 -79320982 + AT_rich Low_complexity Low_complexity 1 36 0 9 897 267 103 0 0 chr13 40963487 40963526 -79320786 + (CCA)n Simple_repeat Simple_repeat 3 41 0 9 897 285 273 15 0 chr13 40963528 40963594 -79320718 - ID4 SINE ID -5 78 12 9 897 291 310 45 37 chr13 40963604 40963738 -79320574 + MIRb SINE MIR 58 192 -76 9 897 407 19 0 19 chr13 40963852 40963905 -79320407 + (TTTTG)n Simple_repeat Simple_repeat 4 55 0 9 897 798 172 7 7 chr13 40963905 40964041 -79320271 - B1_Mur3 SINE Alu -11 138 3 9 897 219 69 0 0 chr13 40964447 40964476 -79319836 + (CCCCG)n Simple_repeat Simple_repeat 1 29 0 9 897 523 330 40 10 chr13 40964838 40965040 -79319272 + MER2 DNA MER2_type 138 345 0 9 897 234 212 0 0 chr13 40965080 40965131 -79319181 + T-rich Low_complexity Low_complexity 16 66 0 9 897 1018 53 113 0 chr13 40965131 40965264 -79319048 - B1_Mus1 SINE Alu 0 148 1 9 897 234 212 0 0 chr13 40965264 40965278 -79319034 + T-rich Low_complexity Low_complexity 2 15 0 9 897 270 21 42 21 chr13 40965325 40965373 -79318939 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 9 897 267 93 0 0 chr13 40965807 40965850 -79318462 + (TTA)n Simple_repeat Simple_repeat 1 43 0 9 897 487 224 0 20 chr13 40966021 40966121 -79318191 + B1F1 SINE Alu 51 148 -1 9 897 300 321 47 29 chr13 40966170 40966340 -79317972 - L1MB7 LINE L1 -194 5990 5818 9 897 404 308 34 28 chr13 40966405 40966582 -79317730 - L1MB7 LINE L1 -409 5775 5598 9 897 831 118 88 7 chr13 40966701 40966837 -79317475 + B1_Mur4 SINE Alu 3 149 -1 9 897 262 289 91 13 chr13 40966891 40966968 -79317344 + B1F2 SINE Alu 2 84 -65 9 897 398 132 13 0 chr13 40966988 40967064 -79317248 + (GGGA)n Simple_repeat Simple_repeat 1 77 0 9 897 613 291 0 0 chr13 40967430 40967442 -79316870 - ID_B1 SINE B4 0 224 213 9 897 1260 56 0 27 chr13 40967442 40967627 -79316685 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 9 897 613 291 0 0 chr13 40967627 40967755 -79316557 - ID_B1 SINE B4 -12 212 85 9 897 457 200 52 32 chr13 40967954 40968076 -79316236 + B1_Mus2 SINE Alu 2 129 -20 9 897 677 245 14 7 chr13 40968350 40968494 -79315818 + B3A SINE B2 2 146 -52 9 897 216 111 0 0 chr13 40968496 40968532 -79315780 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 897 254 253 41 112 chr13 40968895 40968993 -79315319 + MTE2a LTR MaLR 236 326 -53 9 897 498 214 152 40 chr13 40969041 40969192 -79315120 - B3 SINE B2 -10 206 39 9 897 1846 182 63 11 chr13 40969193 40969543 -79314769 + ORR1D1 LTR MaLR 1 368 -6 9 897 250 146 0 0 chr13 40969550 40969591 -79314721 - B3A SINE B2 -157 41 1 9 897 240 246 0 17 chr13 40969591 40969645 -79314667 + MTE2a LTR MaLR 324 376 -3 9 897 181 279 0 0 chr13 40969647 40969690 -79314622 - MIRb SINE MIR -99 169 127 9 897 381 22 0 0 chr13 40969934 40969980 -79314332 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 897 198 0 0 0 chr13 40969980 40970001 -79314311 + (GA)n Simple_repeat Simple_repeat 1 22 0 9 897 668 297 98 47 chr13 40970168 40970468 -79313844 - RLTR12B LTR ERVK -14 514 191 9 897 1306 124 0 20 chr13 40970468 40970665 -79313647 - B2_Mm2 SINE B2 -2 193 1 9 897 668 297 98 47 chr13 40970665 40970813 -79313499 - RLTR12B LTR ERVK -338 190 43 9 897 734 305 88 39 chr13 40970927 40971487 -79312825 - L1MC4 LINE L1 -541 7501 6915 9 897 300 53 0 0 chr13 40971585 40971623 -79312689 + (TG)n Simple_repeat Simple_repeat 1 38 0 9 897 1111 75 14 7 chr13 40972493 40972640 -79311672 + B1_Mur4 SINE Alu 1 148 -2 9 897 409 144 11 11 chr13 40972655 40972746 -79311566 + (TG)n Simple_repeat Simple_repeat 2 92 0 9 897 2577 125 15 24 chr13 40973926 40974337 -79309975 + MTB_Mm LTR MaLR 1 407 0 9 897 387 290 36 66 chr13 40975269 40975435 -79308877 + MER20 DNA MER1_type 54 214 -5 9 897 2863 155 111 21 chr13 40975720 40976234 -79308078 - RLTR20D LTR ERVK 0 568 9 9 897 495 299 26 26 chr13 40976274 40976425 -79307887 - B4A SINE B4 -4 288 138 9 897 216 350 0 24 chr13 40976463 40976545 -79307767 - ID2 SINE ID -3 80 1 9 897 281 232 14 28 chr13 40976560 40976631 -79307681 - ID_B1 SINE B4 -64 160 91 9 897 727 232 0 14 chr13 40977050 40977190 -79307122 + ID_B1 SINE B4 86 223 -1 9 897 1024 244 38 11 chr13 40977179 40977444 -79306868 + MER2 DNA MER2_type 72 343 -2 9 897 187 268 36 0 chr13 40977523 40977579 -79306733 - MIRc SINE MIR -14 254 197 9 897 311 265 116 33 chr13 40977990 40978111 -79306201 + B1F SINE Alu 5 135 -14 9 897 641 140 29 0 chr13 40978578 40978714 -79305598 + CT-rich Low_complexity Low_complexity 2 141 0 9 897 289 326 21 0 chr13 40978921 40978933 -79305379 + ID SINE ID 70 83 -141 9 897 416 268 17 26 chr13 40978933 40979048 -79305264 + PB1D10 SINE Alu 3 116 -1 9 897 263 68 68 0 chr13 40979230 40979289 -79305023 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 9 897 288 0 0 0 chr13 40979413 40979445 -79304867 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 897 247 25 0 48 chr13 40979671 40979713 -79304599 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 9 897 282 197 169 0 chr13 40979877 40979948 -79304364 - ID2 SINE ID 0 83 1 9 897 311 130 0 53 chr13 40980011 40980068 -79304244 - ID_B1 SINE B4 -2 222 169 9 897 470 184 5 15 chr13 40980017 40980113 -79304199 - PB1D10 SINE Alu -8 109 17 9 897 222 37 0 0 chr13 40980207 40980234 -79304078 + (TC)n Simple_repeat Simple_repeat 1 27 0 9 897 264 208 25 90 chr13 40980246 40980325 -79303987 - ID4_ SINE ID -20 63 2 9 897 180 0 0 0 chr13 40981762 40981782 -79302530 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 9 897 1000 321 14 74 chr13 40983693 40983830 -79300482 + MER2 DNA MER2_type 5 120 -225 9 897 1685 22 0 0 chr13 40983830 40984015 -79300297 - B2_Mm1t SINE B2 -7 186 2 9 897 1000 321 14 74 chr13 40984015 40984240 -79300072 + MER2 DNA MER2_type 121 345 0 9 897 189 0 0 0 chr13 40984571 40984592 -79299720 + (CCCCCA)n Simple_repeat Simple_repeat 3 23 0 9 897 455 278 34 11 chr13 40984841 40985016 -79299296 + (CA)n Simple_repeat Simple_repeat 2 180 0 9 897 236 271 127 63 chr13 40985079 40985159 -79299153 - RMER12 LTR ERVK -466 856 769 9 897 772 220 77 39 chr13 40985159 40985367 -79298945 + B3 SINE B2 1 216 0 9 897 1185 62 0 0 chr13 40985388 40985534 -79298778 + B1_Mus2 SINE Alu 2 147 0 9 897 385 307 44 0 chr13 40985905 40986019 -79298293 - RSINE1 SINE B4 -46 119 1 9 897 792 59 0 0 chr13 40986550 40986652 -79297660 + (TTC)n Simple_repeat Simple_repeat 2 103 0 9 897 303 262 76 19 chr13 40986671 40986776 -79297536 + PB1D10 SINE Alu 2 112 -5 1 897 1072 91 0 7 chr13 40986981 40987125 -79297187 + B2_Mm2 SINE B2 1 143 -52 1 897 250 279 44 0 chr13 40988239 40988307 -79296005 + ID2 SINE ID 3 73 -10 1 897 555 172 3 52 chr13 40988359 40988501 -79295811 + B1_Mur4 SINE Alu 18 150 0 1 897 237 254 36 0 chr13 40988589 40988644 -79295668 + ID2 SINE ID 2 58 -25 1 897 397 343 0 48 chr13 40988653 40988840 -79295472 + GA-rich Low_complexity Low_complexity 1 178 0 1 897 189 0 0 0 chr13 40989657 40989678 -79294634 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 897 227 234 0 0 chr13 40989867 40989914 -79294398 - MLT1K LTR MaLR -13 582 536 1 897 260 300 18 35 chr13 40990031 40990145 -79294167 - MER81 DNA AcHobo 0 114 3 1 897 334 229 53 0 chr13 40990594 40990729 -79293583 - B2_Mm1a SINE B2 -2 193 47 1 897 1177 103 23 0 chr13 40990795 40990969 -79293343 - B2_Mm1t SINE B2 -14 179 2 1 897 25 31 0 0 chr13 40990970 40991002 -79293310 + AT_rich Low_complexity Low_complexity 1 32 0 1 897 3566 264 79 23 chr13 40991002 40992160 -79292152 - Lx8 LINE L1 -3 7470 6249 1 897 189 0 0 0 chr13 40992313 40992334 -79291978 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 897 289 188 101 0 chr13 40992394 40992463 -79291849 + Lx8 LINE L1 6176 6251 -1222 1 897 222 37 0 0 chr13 40992522 40992549 -79291763 + (T)n Simple_repeat Simple_repeat 1 27 0 1 897 1265 34 0 0 chr13 40992549 40992695 -79291617 - B1_Mm SINE Alu 0 147 2 1 897 264 160 20 0 chr13 40992855 40992905 -79291407 + ID4 SINE ID 20 70 -13 1 897 330 45 0 0 chr13 40992910 40992954 -79291358 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 897 371 161 0 0 chr13 40993829 40993891 -79290421 + RMER13A LTR ERVK 9 70 -790 1 897 1183 188 5 14 chr13 40993884 40994095 -79290217 - RMER13A LTR ERVK -605 255 47 1 897 243 0 0 0 chr13 40994434 40994461 -79289851 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 897 1032 104 7 0 chr13 40994462 40994597 -79289715 - B1_Mus1 SINE Alu -12 136 1 1 897 508 237 117 15 chr13 40994640 40994777 -79289535 - RSINE1 SINE B4 -7 158 8 1 897 246 326 60 30 chr13 40995377 40995510 -79288802 - RMER15 LTR ERVL -16 559 423 1 897 310 290 100 0 chr13 40995763 40995863 -79288449 - PB1D7 SINE Alu -6 114 5 1 897 325 260 97 89 chr13 40995775 40995922 -79288390 - ID_B1 SINE B4 -49 175 26 1 897 394 325 19 48 chr13 40996030 40996240 -79288072 - MamRep137 DNA TcMar? -216 228 25 1 897 1088 155 32 55 chr13 40996474 40996692 -79287620 + B3 SINE B2 4 216 0 1 897 427 279 9 9 chr13 40997979 40998084 -79286228 + ORR1D2 LTR MaLR 266 370 0 1 897 1958 165 73 26 chr13 40998303 40998727 -79285585 - RodERV21-int LTR ERV1 -4083 908 465 1 897 3642 25 119 14 chr13 40998748 40999194 -79285118 - MT2_Mm LTR ERVL 0 493 1 1 897 666 271 21 26 chr13 40999195 40999388 -79284924 - RodERV21-int LTR ERV1 -4692 299 108 1 897 245 263 0 17 chr13 40999827 40999885 -79284427 - RSINE1 SINE B4 -26 139 83 1 897 251 241 114 53 chr13 41000341 41000455 -79283857 - B4 SINE B4 -120 172 52 1 897 393 270 8 51 chr13 41001933 41002050 -79282262 + MER81 DNA AcHobo 2 113 -1 2 897 532 241 208 17 chr13 41002116 41002289 -79282023 + ID_B1 SINE B4 6 211 -13 3 897 304 274 109 17 chr13 41002537 41002656 -79281656 + L1MCa LINE L1 2191 2320 -4188 4 897 349 261 84 63 chr13 41003607 41003644 -79280668 + B1F1 SINE Alu 1 144 -3 5 897 380 242 0 48 chr13 41003644 41003748 -79280564 + ID_B1 SINE B4 121 219 -5 6 897 829 215 79 21 chr13 41003913 41004103 -79280209 - B3 SINE B2 -14 202 2 7 897 215 98 46 62 chr13 41004112 41004154 -79280158 + T-rich Low_complexity Low_complexity 32 69 0 8 897 261 0 0 0 chr13 41004154 41004183 -79280129 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 897 215 98 46 62 chr13 41004183 41004205 -79280107 + T-rich Low_complexity Low_complexity 7 31 0 1 897 1017 99 35 0 chr13 41004205 41004347 -79279965 - B1_Mus2 SINE Alu 0 147 1 1 897 223 360 132 0 chr13 41004528 41004642 -79279670 - MIRc SINE MIR -45 223 95 1 897 240 35 0 0 chr13 41004915 41004944 -79279368 + (TTCC)n Simple_repeat Simple_repeat 1 29 0 1 897 1262 126 15 20 chr13 41004944 41005139 -79279173 - B2_Mm2 SINE B2 -1 194 1 1 897 894 111 8 0 chr13 41005197 41005323 -79278989 - B1_Mus2 SINE Alu 0 147 21 1 897 521 245 14 20 chr13 41005323 41005343 -79278969 - ID_B1 SINE B4 0 224 80 1 897 1131 79 0 0 chr13 41005385 41005524 -79278788 + B1_Mus1 SINE Alu 1 139 -9 1 897 984 239 25 0 chr13 41005542 41005743 -79278569 - B3 SINE B2 -9 207 2 1 897 399 318 101 45 chr13 41005743 41005990 -79278322 + MER58B DNA MER1_type 76 336 -5 1 897 1351 78 16 22 chr13 41006091 41006275 -79278037 - B2_Mm2 SINE B2 -12 183 1 2 897 298 167 137 14 chr13 41006322 41006395 -79277917 + ID4 SINE ID 2 83 0 2 897 243 0 0 0 chr13 41006492 41006519 -79277793 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 897 1049 59 0 14 chr13 41006519 41006647 -79277665 - B1_Mm SINE Alu -9 138 11 2 897 512 245 64 89 chr13 41006647 41006676 -79277636 - B4 SINE B4 -75 217 65 2 897 217 132 0 50 chr13 41006682 41006722 -79277590 + ID2 SINE ID 7 44 -39 2 897 625 264 0 7 chr13 41006713 41006854 -79277458 + ID_B1 SINE B4 84 223 -1 2 897 414 0 0 0 chr13 41007826 41007872 -79276440 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 2 897 1149 75 0 7 chr13 41007872 41008020 -79276292 - B1_Mus1 SINE Alu -1 147 1 2 897 247 253 116 42 chr13 41008050 41008145 -79276167 + MT2B2 LTR ERVL 140 241 -343 2 897 410 242 19 69 chr13 41008063 41008189 -79276123 + B1F SINE Alu 6 123 -26 3 897 240 143 0 0 chr13 41008497 41008539 -79275773 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 897 21 0 0 0 chr13 41008578 41008599 -79275713 + AT_rich Low_complexity Low_complexity 1 21 0 3 897 351 0 0 0 chr13 41008679 41008718 -79275594 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 897 41 0 0 0 chr13 41009986 41010027 -79274285 + AT_rich Low_complexity Low_complexity 1 41 0 3 897 1216 56 0 0 chr13 41010027 41010171 -79274141 + B1_Mm SINE Alu 2 145 -2 3 897 1345 91 6 0 chr13 41010216 41010391 -79273921 - B2_Mm1a SINE B2 -16 177 2 3 897 444 19 0 0 chr13 41010459 41010512 -79273800 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 897 200 176 0 0 chr13 41010553 41010587 -79273725 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 897 648 257 0 0 chr13 41010587 41010735 -79273577 - B1_Mur3 SINE Alu -1 148 1 3 897 347 282 8 60 chr13 41010738 41010855 -79273457 - PB1D10 SINE Alu -2 115 5 3 897 1264 103 32 5 chr13 41010951 41011137 -79273175 + B2_Mm2 SINE B2 1 191 -4 4 897 841 122 7 37 chr13 41011288 41011424 -79272888 + B1_Mus2 SINE Alu 16 147 0 4 897 224 343 18 45 chr13 41011573 41011683 -79272629 - MIRc SINE MIR -65 203 97 4 897 390 298 40 8 chr13 41014243 41014368 -79269944 - RSINE1 SINE B4 -35 130 2 4 897 1190 50 0 0 chr13 41014960 41015099 -79269213 - B1_Mm SINE Alu -8 139 1 4 897 495 73 0 0 chr13 41016379 41016447 -79267865 + (TG)n Simple_repeat Simple_repeat 2 69 0 4 897 630 130 0 0 chr13 41016506 41016614 -79267698 + (TG)n Simple_repeat Simple_repeat 2 109 0 4 897 323 132 76 11 chr13 41017333 41017425 -79266887 + CT-rich Low_complexity Low_complexity 1 98 0 4 897 407 248 135 28 chr13 41017474 41017615 -79266697 - ID_B1 SINE B4 -60 164 9 4 897 227 79 0 26 chr13 41017796 41017835 -79266477 + (GGGTG)n Simple_repeat Simple_repeat 4 41 0 4 897 211 139 0 27 chr13 41017951 41017988 -79266324 - L2a LINE L2 -38 3388 3353 4 897 225 0 0 0 chr13 41018119 41018144 -79266168 + (T)n Simple_repeat Simple_repeat 1 25 0 5 897 216 0 0 0 chr13 41018168 41018192 -79266120 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 897 626 224 195 0 chr13 41018227 41018401 -79265911 + B3 SINE B2 2 209 -7 5 897 1785 142 23 91 chr13 41018456 41018896 -79265416 + RMER17C LTR ERVK 1 410 0 5 897 21 0 0 0 chr13 41019080 41019101 -79265211 + AT_rich Low_complexity Low_complexity 1 21 0 5 897 270 297 55 103 chr13 41020496 41020661 -79263651 + Charlie12 DNA MER1_type 1663 1819 -1054 5 897 883 48 186 0 chr13 41020961 41021085 -79263227 + B1_Mm SINE Alu 1 147 0 5 897 353 248 47 19 chr13 41021379 41021486 -79262826 + PB1D10 SINE Alu 1 110 -7 5 897 866 53 18 2 chr13 41021602 41021724 -79262588 + B1_Mus1 SINE Alu 13 135 -13 5 897 207 204 0 0 chr13 41022131 41022175 -79262137 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 897 1378 77 16 16 chr13 41022370 41022555 -79261757 - B2_Mm2 SINE B2 -9 186 2 6 897 21 57 0 0 chr13 41022862 41022897 -79261415 + AT_rich Low_complexity Low_complexity 1 35 0 6 897 598 315 34 0 chr13 41022965 41023111 -79261201 + RSINE1 SINE B4 3 153 -12 6 897 401 198 9 0 chr13 41023116 41023222 -79261090 + CT-rich Low_complexity Low_complexity 2 108 0 6 897 324 0 0 0 chr13 41023223 41023259 -79261053 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 897 187 304 72 0 chr13 41023366 41023435 -79260877 + MIRm SINE MIR 16 89 -187 6 897 385 241 61 26 chr13 41023972 41024087 -79260225 + RSINE1 SINE B4 46 164 -1 6 897 447 295 42 21 chr13 41024665 41024798 -79259514 - MTE2b LTR MaLR -70 309 172 6 897 180 0 0 0 chr13 41024798 41024818 -79259494 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 6 897 2200 218 98 11 chr13 41024826 41025387 -79258925 - Lx9 LINE L1 -8 7636 7027 6 112 1334 159 4 79 chr13 41025388 41025668 -79258644 - ORR1A4 LTR MaLR -70 259 1 7 898 225 0 0 0 chr13 41025687 41025712 -79258600 + (TTG)n Simple_repeat Simple_repeat 2 26 0 7 898 2574 184 140 12 chr13 41025726 41026297 -79258015 - Lx9 LINE L1 -630 7014 6371 6 898 976 276 42 44 chr13 41026342 41026800 -79257512 - Lx9 LINE L1 -1398 6246 5790 6 898 2716 51 9 152 chr13 41026999 41027459 -79256853 + MT2C_Mm LTR ERVL 1 394 -81 7 898 444 37 0 0 chr13 41027544 41027598 -79256714 + (GGA)n Simple_repeat Simple_repeat 2 55 0 7 898 308 324 28 9 chr13 41028070 41028176 -79256136 + MIRb SINE MIR 8 115 -153 7 898 210 275 169 36 chr13 41028207 41028290 -79256022 + PB1 SINE Alu 1 94 -33 7 898 256 283 0 0 chr13 41028556 41028609 -79255703 + polypyrimidine Low_complexity Low_complexity 3 55 0 7 898 223 293 0 35 chr13 41028912 41028997 -79255315 + (TATG)n Simple_repeat Simple_repeat 1 82 0 7 898 875 239 71 90 chr13 41029078 41029218 -79255094 - Lx8 LINE L1 0 7473 7335 7 898 1660 200 76 20 chr13 41029218 41029611 -79254701 - MTD LTR MaLR -2 417 3 7 898 875 239 71 90 chr13 41029611 41029837 -79254475 - Lx8 LINE L1 -139 7334 7114 7 898 418 366 25 82 chr13 41029854 41030098 -79254214 - B4A SINE B4 -62 230 1 8 898 291 217 0 14 chr13 41030234 41030304 -79254008 + ID4_ SINE ID 2 70 -13 8 898 3447 77 11 0 chr13 41030897 41031339 -79252973 - LTRIS5 LTR ERV1 0 447 1 8 898 1173 68 7 0 chr13 41031503 41031649 -79252663 - B1_Mus1 SINE Alu -1 147 1 8 898 729 102 114 30 chr13 41031709 41031841 -79252471 - B1_Mus1 SINE Alu -1 147 5 8 898 246 95 0 0 chr13 41031944 41031986 -79252326 + (T)n Simple_repeat Simple_repeat 1 42 0 8 898 1862 134 64 42 chr13 41032687 41033045 -79251267 - RLTR14 LTR ERV1 -16 366 1 8 898 591 261 71 94 chr13 41033095 41033319 -79250993 - ID_B1 SINE B4 -3 221 3 8 898 653 226 77 6 chr13 41033502 41033658 -79250654 - B3 SINE B2 -1 215 49 8 898 853 192 139 0 chr13 41034264 41034451 -79249861 + B3 SINE B2 1 213 -3 8 898 648 177 35 0 chr13 41034903 41035016 -79249296 + B1_Mur3 SINE Alu 1 117 -32 9 898 1168 69 0 0 chr13 41035164 41035309 -79249003 + B1_Mus2 SINE Alu 1 145 -2 9 898 450 0 0 0 chr13 41035378 41035428 -79248884 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 898 272 311 0 32 chr13 41035941 41036034 -79248278 + MLT1A0 LTR MaLR 32 121 -244 9 898 11111 134 51 49 chr13 41036510 41037846 -79246466 - Lx7 LINE L1 -1722 5974 4642 9 898 252 0 0 0 chr13 41037846 41037874 -79246438 + (TG)n Simple_repeat Simple_repeat 2 29 0 9 898 11111 130 52 43 chr13 41037874 41038214 -79246098 - Lx7 LINE L1 -1239 4641 4298 9 898 962 16 186 0 chr13 41038214 41038338 -79245974 - B1_Mus2 SINE Alu 0 147 1 9 898 11111 130 52 43 chr13 41038338 41038814 -79245498 - Lx7 LINE L1 -1583 4297 3810 9 898 180 0 0 0 chr13 41039088 41039108 -79245204 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 9 898 397 306 16 31 chr13 41039237 41039365 -79244947 + B1F1 SINE Alu 12 137 -12 9 898 549 309 37 11 chr13 41039412 41039602 -79244710 + B4 SINE B4 96 290 -2 9 898 1465 179 177 29 chr13 41039628 41040013 -79244299 - RMER10A LTR ERVL 0 442 1 1 898 195 129 0 0 chr13 41040612 41040643 -79243669 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 1 898 420 193 96 0 chr13 41040704 41040787 -79243525 + B4 SINE B4 202 292 0 1 898 281 250 45 0 chr13 41040789 41040877 -79243435 + (CA)n Simple_repeat Simple_repeat 1 92 0 1 898 256 122 0 0 chr13 41041735 41041784 -79242528 - B3 SINE B2 0 216 168 1 898 267 79 0 60 chr13 41041884 41041951 -79242361 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 1 898 317 319 104 0 chr13 41041971 41042106 -79242206 + MER20 DNA MER1_type 18 166 -53 1 898 529 238 39 55 chr13 41042125 41042355 -79241957 + MTE2b LTR MaLR 74 372 -7 1 898 228 67 0 0 chr13 41042467 41042497 -79241815 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 1 898 695 105 0 19 chr13 41042515 41042622 -79241690 - B1_Mus2 SINE Alu 0 147 43 1 898 1221 54 0 0 chr13 41042709 41042856 -79241456 + B1_Mus2 SINE Alu 1 147 0 1 898 359 118 0 117 chr13 41043472 41043541 -79240771 + B1_Mus2 SINE Alu 76 138 -9 1 898 189 107 0 0 chr13 41043541 41043569 -79240743 + (CGAAA)n Simple_repeat Simple_repeat 3 30 0 1 898 360 255 9 121 chr13 41043606 41043722 -79240590 + MER2B DNA MER2_type 234 336 0 1 898 23 0 0 0 chr13 41043883 41043906 -79240406 + AT_rich Low_complexity Low_complexity 1 23 0 1 898 375 41 0 0 chr13 41044139 41044188 -79240124 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 898 602 226 109 76 chr13 41044713 41044924 -79239388 - ID_B1 SINE B4 -5 219 2 1 898 519 60 0 0 chr13 41045052 41045119 -79239193 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 898 587 235 109 19 chr13 41045227 41045383 -79238929 + B3 SINE B2 47 216 0 1 898 361 312 15 39 chr13 41045582 41045712 -79238600 - MER5A1 DNA MER1_type -38 128 2 1 898 216 0 0 0 chr13 41046618 41046642 -79237670 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 898 353 245 37 64 chr13 41048733 41048842 -79235470 + MER20 DNA MER1_type 1 106 -113 1 898 21 0 0 0 chr13 41049155 41049176 -79235136 + AT_rich Low_complexity Low_complexity 1 21 0 1 898 1131 56 19 0 chr13 41049252 41049412 -79234900 + (GA)n Simple_repeat Simple_repeat 2 164 0 1 898 594 316 9 67 chr13 41049697 41049921 -79234391 - ID_B1 SINE B4 -11 213 3 1 898 699 271 49 45 chr13 41050037 41050261 -79234051 - MLT1B LTR MaLR -18 372 148 1 898 803 182 0 26 chr13 41050262 41050414 -79233898 + B1_Mur2 SINE Alu 1 148 -1 1 898 283 333 10 10 chr13 41051547 41051650 -79232662 - L2a LINE L2 -10 3416 3314 1 898 201 280 39 39 chr13 41051862 41051966 -79232346 + (TATATG)n Simple_repeat Simple_repeat 3 106 0 1 898 4251 66 35 5 chr13 41052026 41052593 -79231719 - MT2B2 LTR ERVL 0 584 1 1 898 274 273 151 9 chr13 41053017 41053130 -79231182 + PB1D10 SINE Alu 3 129 -20 1 898 433 316 28 41 chr13 41053961 41054106 -79230206 - B1F1 SINE Alu -6 143 1 1 898 426 39 0 0 chr13 41054911 41054963 -79229349 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 1 898 220 250 31 15 chr13 41055556 41055621 -79228691 + B4A SINE B4 15 80 -212 1 898 291 332 146 4 chr13 41056528 41056767 -79227545 + L1MC4 LINE L1 6818 7090 -952 1 898 447 234 170 15 chr13 41056881 41057016 -79227296 - MER58A DNA MER1_type 0 224 73 1 898 389 305 156 4 chr13 41057561 41057798 -79226514 + L1MC4 LINE L1 6818 7090 -952 1 898 447 262 111 0 chr13 41057912 41058038 -79226274 - MER58A DNA MER1_type 0 224 85 1 898 389 305 156 4 chr13 41058592 41058829 -79225483 + L1MC4 LINE L1 6818 7090 -952 1 898 447 262 111 0 chr13 41058943 41059069 -79225243 - MER58A DNA MER1_type 0 224 85 1 898 389 305 156 4 chr13 41059623 41059860 -79224452 + L1MC4 LINE L1 6818 7090 -952 1 898 447 262 111 0 chr13 41059974 41060100 -79224212 - MER58A DNA MER1_type 0 224 85 1 898 235 143 71 0 chr13 41060654 41060696 -79223616 + L1MC4 LINE L1 6818 6862 -1180 1 898 272 241 0 0 chr13 41060912 41060966 -79223346 + B4A SINE B4 11 64 -228 1 898 1089 75 0 0 chr13 41061482 41061616 -79222696 - B1_Mus2 SINE Alu -13 134 1 1 898 271 296 0 101 chr13 41061616 41061651 -79222661 - RSINE1 SINE B4 -93 72 43 1 898 2950 75 23 3 chr13 41061651 41062038 -79222274 - MTA_Mm LTR MaLR 0 396 2 1 898 271 296 0 101 chr13 41062038 41062081 -79222231 - RSINE1 SINE B4 -123 42 2 1 898 1844 143 11 113 chr13 41062159 41062514 -79221798 + ORR1A4 LTR MaLR 3 321 -8 1 898 194 0 0 37 chr13 41062855 41062882 -79221430 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 898 1702 153 97 10 chr13 41062905 41063215 -79221097 - ORR1B2 LTR MaLR -8 359 23 1 898 793 158 6 70 chr13 41063215 41063372 -79220940 - B1_Mur4 SINE Alu -3 147 1 1 898 204 88 59 0 chr13 41063373 41063407 -79220905 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1 898 564 254 0 0 chr13 41063419 41063533 -79220779 - PB1D9 SINE Alu -6 114 1 1 898 262 385 60 78 chr13 41063533 41063801 -79220511 - LTR41 LTR ERVL -100 668 406 1 898 326 292 113 32 chr13 41064120 41064244 -79220068 - LTR41 LTR ERVL -591 177 44 1 898 528 289 165 41 chr13 41064606 41064873 -79219439 + RMER15 LTR ERVL 275 574 -1 1 898 1241 75 0 0 chr13 41065449 41065608 -79218704 + RLTR24 LTR ERV1 1 159 -370 1 898 1138 22 0 0 chr13 41065606 41065742 -79218570 - ORR1A1 LTR MaLR -165 181 46 1 898 284 213 16 16 chr13 41065753 41065815 -79218497 + B1_Mur4 SINE Alu 82 143 -7 1 898 352 266 0 37 chr13 41065843 41065925 -79218387 + PB1D7 SINE Alu 42 120 0 1 898 183 278 41 122 chr13 41066843 41066966 -79217346 - L2b LINE L2 -232 3143 3031 1 898 542 283 100 10 chr13 41066978 41067236 -79217076 + L1MA4A LINE L1 5658 5936 -1708 1 898 841 241 29 259 chr13 41067400 41067558 -79216754 - MTD LTR MaLR 0 419 256 1 898 992 61 0 29 chr13 41067558 41067694 -79216618 - B1_Mus2 SINE Alu -13 134 3 1 898 841 241 29 259 chr13 41067694 41067921 -79216391 - MTD LTR MaLR 0 255 19 1 898 504 312 28 0 chr13 41067962 41068106 -79216206 + RSINE1 SINE B4 3 150 -15 1 898 34 0 0 0 chr13 41068115 41068149 -79216163 + AT_rich Low_complexity Low_complexity 1 34 0 1 898 651 263 13 19 chr13 41068311 41068466 -79215846 - RSINE1 SINE B4 -1 164 11 1 898 483 150 103 86 chr13 41068558 41068675 -79215637 + PB1D9 SINE Alu 1 119 -1 1 898 217 278 28 0 chr13 41068686 41068758 -79215554 + L2 LINE L2 2408 2481 -938 1 898 1236 103 0 22 chr13 41069207 41069386 -79214926 + B2_Mm2 SINE B2 2 176 -19 1 898 585 297 101 0 chr13 41069717 41069936 -79214376 + B4A SINE B4 5 245 -47 1 898 1291 88 11 21 chr13 41070087 41070273 -79214039 - B2_Mm1t SINE B2 -8 185 2 1 898 1034 204 14 23 chr13 41070280 41070496 -79213816 - B3 SINE B2 -2 214 1 1 898 197 33 0 32 chr13 41071571 41071602 -79212710 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 898 242 338 12 48 chr13 41072204 41072288 -79212024 - ID4_ SINE ID 0 83 3 1 898 660 116 44 78 chr13 41072374 41072542 -79211770 + RMER17A2 LTR ERVK 1 157 -485 1 898 1143 72 0 0 chr13 41072712 41072850 -79211462 + B1_Mus2 SINE Alu 1 138 -9 1 898 182 62 31 0 chr13 41072850 41072882 -79211430 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 898 207 260 149 14 chr13 41073511 41073585 -79210727 + MER5A DNA MER1_type 38 121 -68 1 898 234 0 0 0 chr13 41073712 41073738 -79210574 + (T)n Simple_repeat Simple_repeat 1 26 0 1 898 1223 61 0 0 chr13 41073738 41073885 -79210427 - B1_Mus2 SINE Alu 0 147 1 1 898 403 283 34 34 chr13 41073920 41074037 -79210275 + PB1 SINE Alu 5 121 -6 1 898 269 305 26 16 chr13 41074059 41074161 -79210151 + ID4_ SINE ID 2 103 -49 1 898 498 291 47 13 chr13 41074184 41074334 -79209978 + MER2 DNA MER2_type 16 170 -175 1 898 297 274 55 0 chr13 41074370 41074443 -79209869 + PB1D7 SINE Alu 32 108 -12 1 898 925 274 127 29 chr13 41074684 41075000 -79209312 - ORR1E LTR MaLR -11 348 2 1 898 497 261 18 0 chr13 41075118 41075229 -79209083 - RSINE1 SINE B4 -51 114 2 1 898 321 200 25 51 chr13 41075250 41075329 -79208983 - ID4_ SINE ID -4 79 3 1 898 222 232 0 44 chr13 41076350 41076395 -79207917 - B1F2 SINE Alu -106 43 1 1 898 366 222 102 8 chr13 41076402 41076529 -79207783 - L1MB3 LINE L1 -9 6174 6036 1 898 1249 48 0 0 chr13 41076603 41076749 -79207563 - B1_Mm SINE Alu 0 147 2 1 898 473 174 109 43 chr13 41077406 41077544 -79206768 + B1F SINE Alu 3 149 0 1 898 448 250 0 0 chr13 41077603 41077691 -79206621 + PB1D10 SINE Alu 29 116 -1 1 898 236 282 92 78 chr13 41077717 41077859 -79206453 - ID_B1 SINE B4 -79 145 2 1 898 355 230 160 73 chr13 41077902 41077987 -79206325 - Kanga1 DNA Tc2 -1336 409 332 1 898 856 51 8 8 chr13 41077987 41078106 -79206206 + (TTTTC)n Simple_repeat Simple_repeat 2 120 0 1 898 355 230 160 73 chr13 41078106 41078170 -79206142 - Kanga1 DNA Tc2 -1414 331 248 1 898 288 345 54 9 chr13 41078227 41078338 -79205974 + MER20 DNA MER1_type 10 125 -94 1 898 974 227 39 25 chr13 41078693 41078896 -79205416 - B3 SINE B2 -7 209 4 1 898 304 254 28 14 chr13 41079444 41079516 -79204796 + ID4_ SINE ID 2 74 -9 1 898 505 314 57 116 chr13 41080494 41080901 -79203411 + MLT1B LTR MaLR 7 389 -1 1 898 533 246 63 35 chr13 41081008 41081151 -79203161 + B1_Mur1 SINE Alu 3 149 0 1 898 200 59 0 29 chr13 41081153 41081188 -79203124 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 898 387 229 92 37 chr13 41081849 41081958 -79202354 - PB1D10 SINE Alu -2 115 1 2 898 249 31 0 0 chr13 41082013 41082022 -79202290 + (T)n Simple_repeat Simple_repeat 1 9 0 2 898 1150 81 0 7 chr13 41082022 41082171 -79202141 - B1_Mus1 SINE Alu 0 148 1 2 898 249 31 0 0 chr13 41082171 41082193 -79202119 + (T)n Simple_repeat Simple_repeat 1 22 0 2 898 952 191 106 0 chr13 41082232 41082421 -79201891 - B3 SINE B2 -7 209 1 2 898 942 284 0 5 chr13 41082422 41082631 -79201681 - B4A SINE B4 -59 233 26 2 898 682 150 12 30 chr13 41082886 41083051 -79201261 + CT-rich Low_complexity Low_complexity 1 162 0 2 898 995 133 31 161 chr13 41083051 41083198 -79201114 - B2_Mm2 SINE B2 0 195 52 2 898 2880 74 18 2 chr13 41083198 41083615 -79200697 + L1_Mus2 LINE L1 6162 6566 0 2 898 995 133 31 161 chr13 41083615 41083688 -79200624 - B2_Mm2 SINE B2 -144 51 1 2 898 857 221 7 18 chr13 41083908 41084086 -79200226 + B3 SINE B2 46 216 0 2 898 842 134 21 21 chr13 41084106 41084251 -79200061 + B1_Mus2 SINE Alu 1 145 -2 2 898 24 0 0 0 chr13 41084623 41084647 -79199665 + AT_rich Low_complexity Low_complexity 1 24 0 2 898 1125 108 0 0 chr13 41084708 41084856 -79199456 + B1_Mus1 SINE Alu 1 148 0 2 898 198 0 0 0 chr13 41084856 41084878 -79199434 + (GAAAA)n Simple_repeat Simple_repeat 2 23 0 2 898 225 0 0 0 chr13 41084899 41084924 -79199388 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 898 380 226 19 19 chr13 41085096 41085200 -79199112 - PB1D10 SINE Alu -10 107 4 2 898 752 108 47 71 chr13 41085377 41085546 -79198766 - Lx9 LINE L1 0 7644 7480 2 898 1311 170 50 83 chr13 41085572 41085874 -79198438 + Lx9 LINE L1 6532 6823 -821 2 898 333 192 27 0 chr13 41085907 41085980 -79198332 - PB1D9 SINE Alu -9 111 37 2 898 910 118 23 6 chr13 41086154 41086325 -79197987 + (GGA)n Simple_repeat Simple_repeat 2 175 0 2 898 329 212 35 0 chr13 41086315 41086428 -79197884 + GA-rich Low_complexity Low_complexity 2 118 0 2 898 1493 40 17 0 chr13 41087348 41087523 -79196789 - B2_Mm2 SINE B2 -16 179 2 2 898 232 253 100 12 chr13 41087642 41087722 -79196590 - PB1D7 SINE Alu -1 119 33 2 898 30 0 0 0 chr13 41087745 41087775 -79196537 + AT_rich Low_complexity Low_complexity 1 30 0 2 898 534 246 120 65 chr13 41087859 41087996 -79196316 - B3 SINE B2 -5 211 66 2 898 2966 68 39 3 chr13 41087996 41088382 -79195930 - MTB LTR MaLR 0 400 1 2 898 534 246 120 65 chr13 41088382 41088444 -79195868 - B3 SINE B2 -151 65 1 2 898 305 309 85 51 chr13 41088444 41088619 -79195693 + MER31A LTR ERV1 305 485 0 2 898 22 0 0 0 chr13 41088784 41088806 -79195506 + AT_rich Low_complexity Low_complexity 1 22 0 2 898 222 194 0 0 chr13 41088807 41088843 -79195469 + polypurine Low_complexity Low_complexity 1 36 0 2 898 759 191 194 43 chr13 41088843 41089029 -79195283 + B3 SINE B2 2 215 -1 2 898 1123 76 0 20 chr13 41089038 41089186 -79195126 + B1_Mus2 SINE Alu 1 145 -2 2 898 1056 129 0 0 chr13 41089208 41089378 -79194934 + (GAA)n Simple_repeat Simple_repeat 2 171 0 2 898 388 204 113 93 chr13 41089529 41089680 -79194632 + MT2B LTR ERVL 104 257 -344 2 898 911 87 0 0 chr13 41089598 41089725 -79194587 + B1_Mus1 SINE Alu 22 148 0 2 898 540 0 0 0 chr13 41090105 41090165 -79194147 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 898 190 206 0 0 chr13 41090183 41090217 -79194095 + L2a LINE L2 3393 3426 0 2 898 752 166 57 7 chr13 41090757 41090897 -79193415 - B1_Mus1 SINE Alu 0 148 2 2 898 195 69 0 0 chr13 41091132 41091161 -79193151 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 898 1282 27 0 0 chr13 41091161 41091307 -79193005 - B1_Mus2 SINE Alu 0 147 2 2 898 459 0 0 0 chr13 41091865 41091916 -79192396 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 898 353 277 72 0 chr13 41091932 41092015 -79192297 - PB1D10 SINE Alu -10 107 19 2 898 1230 54 0 0 chr13 41092286 41092433 -79191879 + B1_Mus1 SINE Alu 2 148 0 2 898 737 278 101 80 chr13 41092737 41093599 -79190713 - L1MA6 LINE L1 -411 5880 5020 2 898 1212 49 0 0 chr13 41093599 41093741 -79190571 + B1_Mus1 SINE Alu 2 143 -5 2 898 721 273 96 104 chr13 41093741 41093871 -79190441 - L1MA6 LINE L1 -861 5019 4926 2 898 1597 37 21 0 chr13 41093871 41094059 -79190253 - B2_Mm1t SINE B2 0 193 2 2 898 721 275 93 108 chr13 41094059 41094371 -79189941 - L1MA6 LINE L1 -955 4925 4612 2 898 395 205 9 38 chr13 41094476 41094580 -79189732 - L1MA6 LINE L1 -1536 4607 4473 2 898 1170 49 14 7 chr13 41094683 41094828 -79189484 + B1_Mm SINE Alu 2 147 0 2 898 227 203 47 78 chr13 41095272 41095336 -79188976 - RLTR3_Mm LTR ERVK -1135 193 132 2 898 1259 104 0 27 chr13 41095507 41095694 -79188618 - B2_Mm2 SINE B2 -12 183 2 2 898 844 83 0 8 chr13 41096088 41096199 -79188113 + B1_Mus2 SINE Alu 25 135 -12 2 898 207 0 0 0 chr13 41096199 41096222 -79188090 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 2 898 233 196 71 0 chr13 41096903 41096959 -79187353 + ID_B1 SINE B4 81 140 -84 2 898 290 217 121 0 chr13 41096913 41096992 -79187320 + PB1D10 SINE Alu 14 101 -16 2 898 367 283 100 27 chr13 41097088 41097385 -79186927 + L1MA6 LINE L1 5957 6292 -5 2 898 265 105 0 0 chr13 41097530 41097568 -79186744 + B3 SINE B2 2 39 -177 2 898 901 174 196 6 chr13 41097568 41097747 -79186565 + B3 SINE B2 2 214 -2 2 898 534 182 55 0 chr13 41098033 41098143 -79186169 + PB1D9 SINE Alu 5 120 0 2 898 283 308 40 40 chr13 41098066 41098191 -79186121 + RLTR25B LTR ERVK 442 566 -462 2 898 755 176 0 13 chr13 41098230 41098385 -79185927 + CT-rich Low_complexity Low_complexity 1 153 0 2 898 1035 127 0 60 chr13 41098385 41098552 -79185760 - B2_Mm2 SINE B2 -34 161 5 2 898 211 331 80 49 chr13 41098578 41098750 -79185562 - MIRb SINE MIR -72 196 19 2 898 438 161 94 120 chr13 41098846 41098988 -79185324 + B1F SINE Alu 2 138 -11 2 898 200 273 0 18 chr13 41098990 41099046 -79185266 + G-rich Low_complexity Low_complexity 4 58 0 2 898 1338 105 5 0 chr13 41099153 41099343 -79184969 - B2_Mm1t SINE B2 -1 192 2 2 898 382 221 169 6 chr13 41100275 41100393 -79183919 - ORR1C1 LTR MaLR 0 394 237 2 898 848 319 42 82 chr13 41100407 41101017 -79183295 - RLTR18B LTR ERVK -1 615 60 2 898 564 231 219 27 chr13 41101044 41101231 -79183081 - ORR1C1 LTR MaLR -155 223 1 2 898 1893 122 112 6 chr13 41101344 41101658 -79182654 - ORR1B2 LTR MaLR 0 367 21 2 898 237 320 13 51 chr13 41102414 41102493 -79181819 - MER58B DNA MER1_type -18 323 248 2 898 630 176 130 0 chr13 41102971 41103102 -79181210 - B1_Mus1 SINE Alu 0 148 1 2 898 590 173 158 0 chr13 41103848 41103975 -79180337 + B1_Mur1 SINE Alu 3 149 0 2 898 851 224 72 10 chr13 41104376 41104570 -79179742 - B3 SINE B2 -1 215 10 2 898 1088 41 0 130 chr13 41106972 41107141 -79177171 + B1_Mus2 SINE Alu 1 147 0 2 898 2676 35 69 51 chr13 41108785 41108841 -79175471 - MTB LTR MaLR 0 400 341 2 898 3333 36 13 3 chr13 41108841 41109233 -79175079 + MTA_Mm LTR MaLR 1 396 0 2 898 2676 35 69 51 chr13 41109233 41109569 -79174743 - MTB LTR MaLR -60 340 1 2 898 495 189 111 0 chr13 41109616 41109706 -79174606 + B1_Mus1 SINE Alu 9 108 -40 2 898 434 294 0 104 chr13 41109838 41110020 -79174292 + RSINE1 SINE B4 3 165 0 2 898 234 297 15 59 chr13 41110109 41110177 -79174135 + ID_B1 SINE B4 82 146 -78 2 898 235 300 57 48 chr13 41110119 41110224 -79174088 + PB1D10 SINE Alu 12 117 0 2 898 400 214 33 33 chr13 41110524 41110616 -79173696 + PB1 SINE Alu 11 102 -25 2 898 291 245 103 9 chr13 41111133 41111240 -79173072 + RMER15 LTR ERVL 367 483 -92 2 898 225 336 55 0 chr13 41112630 41112740 -79171572 + MIRc SINE MIR 3 118 -150 2 898 319 310 16 81 chr13 41112828 41112951 -79171361 - RSINE1 SINE B4 -6 159 45 2 898 306 0 0 0 chr13 41114666 41114700 -79169612 + (CAGA)n Simple_repeat Simple_repeat 4 37 0 2 898 3038 67 28 0 chr13 41114861 41115250 -79169062 - MTB LTR MaLR 0 400 1 2 898 195 255 43 0 chr13 41115551 41115598 -79168714 + L2 LINE L2 3021 3069 -350 2 898 483 132 0 0 chr13 41116904 41116972 -79167340 - B2_Mm2 SINE B2 -126 69 2 2 898 209 98 0 24 chr13 41117314 41117356 -79166956 + (TGGGGG)n Simple_repeat Simple_repeat 1 41 0 2 898 496 274 40 16 chr13 41118011 41118137 -79166175 + ID_B1 SINE B4 95 223 -1 2 898 484 204 65 0 chr13 41118410 41118518 -79165794 - PB1D10 SINE Alu 0 117 3 2 898 21 0 0 0 chr13 41118781 41118802 -79165510 + AT_rich Low_complexity Low_complexity 1 21 0 2 898 385 341 0 0 chr13 41118866 41118989 -79165323 - PB1 SINE Alu -4 123 1 2 898 288 262 26 15 chr13 41119063 41119096 -79165216 - ID4 SINE ID -38 114 47 2 898 293 246 16 0 chr13 41119096 41119157 -79165155 - ID SINE ID -139 85 24 2 898 288 262 26 15 chr13 41119157 41119177 -79165135 - ID4 SINE ID -38 46 1 2 898 242 278 42 0 chr13 41119301 41119373 -79164939 - ID4_ SINE ID -7 76 2 2 898 267 256 110 0 chr13 41119386 41119468 -79164844 - B1F SINE Alu -9 140 50 2 898 227 245 0 0 chr13 41119552 41119605 -79164707 + L1MC2 LINE L1 5887 5939 -405 2 898 363 236 0 0 chr13 41119636 41119708 -79164604 + ID4 SINE ID 1 72 -11 2 898 232 234 0 21 chr13 41119709 41119757 -79164555 + polypurine Low_complexity Low_complexity 4 50 0 2 898 306 270 104 34 chr13 41119894 41120097 -79164215 + Lx7 LINE L1 5610 5862 -776 2 898 29 28 0 0 chr13 41120787 41120823 -79163489 + AT_rich Low_complexity Low_complexity 1 36 0 2 898 531 227 61 0 chr13 41122075 41122207 -79162105 - B1F SINE Alu 0 149 10 3 898 611 254 36 0 chr13 41122545 41122683 -79161629 - B1_Mur1 SINE Alu -6 143 1 3 898 237 83 0 0 chr13 41122723 41122759 -79161553 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 3 898 862 232 63 10 chr13 41122919 41123124 -79161188 - B3 SINE B2 0 216 1 3 898 321 215 38 12 chr13 41124057 41124137 -79160175 + RMER15 LTR ERVL 293 374 -201 3 898 582 15 0 0 chr13 41124530 41124597 -79159715 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 3 898 221 347 14 0 chr13 41125669 41125741 -79158571 - MIRb SINE MIR -142 126 54 3 898 258 32 0 0 chr13 41125774 41125805 -79158507 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 898 799 221 32 7 chr13 41126933 41127088 -79157224 - ID_B1 SINE B4 -34 190 32 3 898 1072 60 0 0 chr13 41128326 41128460 -79155852 + B1_Mus1 SINE Alu 6 139 -9 3 898 333 0 0 0 chr13 41128460 41128497 -79155815 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 898 453 243 280 27 chr13 41128497 41128640 -79155672 + RMER5 LTR ERV1 145 320 -214 3 898 330 87 0 0 chr13 41128640 41128686 -79155626 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 898 453 296 85 38 chr13 41128686 41128876 -79155436 + RMER5 LTR ERV1 321 523 -11 3 898 287 333 76 0 chr13 41129579 41129723 -79154589 - Charlie2a DNA MER1_type -806 2055 1901 3 898 504 48 0 0 chr13 41130323 41130386 -79153926 + (CATA)n Simple_repeat Simple_repeat 4 66 0 3 898 333 0 0 0 chr13 41130386 41130422 -79153890 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 898 203 264 19 0 chr13 41130451 41130504 -79153808 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 898 489 215 93 0 chr13 41130680 41130804 -79153508 + B1_Mur4 SINE Alu 14 149 -1 3 898 25 31 0 0 chr13 41130826 41130858 -79153454 + AT_rich Low_complexity Low_complexity 1 32 0 3 898 252 0 0 0 chr13 41130995 41131023 -79153289 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 898 191 61 30 0 chr13 41131111 41131144 -79153168 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 898 253 198 36 24 chr13 41131158 41131241 -79153071 + (TG)n Simple_repeat Simple_repeat 1 84 0 3 898 364 145 37 22 chr13 41131255 41131389 -79152923 + (TG)n Simple_repeat Simple_repeat 1 136 0 3 898 2770 160 68 146 chr13 41131405 41132216 -79152096 - Lx9 LINE L1 -48 7596 6849 3 898 212 304 137 43 chr13 41132444 41132561 -79151751 - L2b LINE L2 -6 3369 3242 3 898 306 0 0 0 chr13 41132645 41132679 -79151633 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 898 457 277 119 14 chr13 41132682 41132825 -79151487 + RSINE1 SINE B4 2 159 -6 3 898 700 203 40 34 chr13 41133606 41133754 -79150558 + B1_Mur3 SINE Alu 1 149 0 3 898 277 284 32 128 chr13 41135885 41135901 -79148411 - PB1D10 SINE Alu -2 115 3 3 898 375 255 25 102 chr13 41135901 41136010 -79148302 - ID_B1 SINE B4 -38 186 85 3 898 249 83 0 0 chr13 41136010 41136046 -79148266 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 898 269 290 53 61 chr13 41136101 41136215 -79148097 - PB1D10 SINE Alu 0 117 5 3 898 467 228 31 39 chr13 41137065 41137193 -79147119 + PB1 SINE Alu 1 127 0 3 898 219 333 29 0 chr13 41137882 41137951 -79146361 + ID4 SINE ID 1 71 -12 3 898 216 0 0 0 chr13 41137966 41137990 -79146322 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 3 898 564 272 81 169 chr13 41137994 41138290 -79146022 - MTE2a LTR MaLR -108 271 2 3 898 292 310 111 8 chr13 41138712 41138829 -79145483 + RSINE1 SINE B4 3 131 -34 3 898 349 375 53 12 chr13 41140531 41140720 -79143592 - L2a LINE L2 0 3426 3185 3 898 366 236 219 33 chr13 41140797 41141007 -79143305 + Lx9 LINE L1 7391 7639 -5 3 898 221 270 107 13 chr13 41142139 41142214 -79142098 - RSINE1 SINE B4 -82 83 2 3 898 864 145 72 0 chr13 41142522 41142660 -79141652 - B1_Mur4 SINE Alu 0 150 3 3 898 764 256 22 6 chr13 41143176 41143357 -79140955 + B3 SINE B2 3 186 -30 3 898 1222 54 0 0 chr13 41143803 41143950 -79140362 - B1_Mus1 SINE Alu 0 148 2 3 898 333 0 0 0 chr13 41145418 41145455 -79138857 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 898 499 239 0 35 chr13 41145456 41145569 -79138743 - B1_Mur4 SINE Alu -7 143 35 3 898 265 301 159 32 chr13 41145590 41145779 -79138533 - BLACKJACK DNA AcHobo -2016 928 716 3 898 648 156 24 32 chr13 41145814 41145940 -79138372 + B1_Mus1 SINE Alu 12 136 -12 3 898 183 162 0 0 chr13 41145944 41145981 -79138331 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 3 898 349 271 50 8 chr13 41146093 41146212 -79138100 - L1ME3A LINE L1 -28 6145 6022 3 898 356 262 18 61 chr13 41146462 41146576 -79137736 + L2a LINE L2 3314 3422 -4 3 898 261 0 0 0 chr13 41148125 41148154 -79136158 + (A)n Simple_repeat Simple_repeat 1 29 0 3 898 630 202 0 9 chr13 41149063 41149178 -79135134 - PB1D10 SINE Alu -2 115 2 3 898 24 0 0 0 chr13 41149369 41149393 -79134919 + AT_rich Low_complexity Low_complexity 1 24 0 3 898 482 288 46 16 chr13 41149412 41149606 -79134706 - L1MA6 LINE L1 -48 6252 6053 3 898 523 305 8 8 chr13 41149689 41149821 -79134491 - ID_B1 SINE B4 -11 213 82 3 898 264 268 71 118 chr13 41149839 41149934 -79134378 - MER33 DNA MER1_type -195 129 40 3 898 1475 65 11 0 chr13 41149934 41150120 -79134192 + B2_Mm1t SINE B2 1 188 -5 3 898 264 268 71 118 chr13 41150120 41150151 -79134161 - MER33 DNA MER1_type -285 39 9 3 898 461 312 150 5 chr13 41150352 41150545 -79133767 - B4A SINE B4 -2 290 70 3 898 1158 143 113 5 chr13 41151704 41151908 -79132404 + URR1A DNA MER1_type 1 226 0 3 898 194 333 0 8 chr13 41152532 41152656 -79131656 + CT-rich Low_complexity Low_complexity 1 123 0 3 898 259 303 30 69 chr13 41152816 41152978 -79131334 + MT2B LTR ERVL 116 275 -309 3 898 765 97 26 17 chr13 41152882 41152998 -79131314 + B1_Mur2 SINE Alu 31 147 -2 3 898 237 139 0 0 chr13 41153005 41153048 -79131264 + (CAGAC)n Simple_repeat Simple_repeat 5 47 0 3 898 1385 228 54 27 chr13 41153086 41153455 -79130857 + MTEb LTR MaLR 1 379 0 3 112 38848 8 3 7 chr13 41153684 41158934 -79125378 + L1Md_A LINE L1 363 5586 -297 3 899 8921 17 0 0 chr13 41158934 41159979 -79124333 + L1Md_A LINE L1 5587 6582 0 3 899 522 314 38 19 chr13 41160349 41160508 -79123804 + RSINE1 SINE B4 2 163 -2 3 899 515 40 0 0 chr13 41160812 41160886 -79123426 - L1_Mus3 LINE L1 0 6638 6565 3 899 5316 65 16 11 chr13 41160887 41161587 -79122725 + L1_Mus3 LINE L1 5873 6575 -63 3 899 1149 162 64 37 chr13 41161818 41162036 -79122276 + URR1B DNA MER1_type 2 225 0 3 899 456 19 0 0 chr13 41162243 41162296 -79122016 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 899 446 245 0 39 chr13 41162297 41162399 -79121913 - PB1D10 SINE Alu -15 102 5 3 899 791 212 56 6 chr13 41162312 41162473 -79121839 - ID_B1 SINE B4 -52 172 4 3 899 370 319 17 8 chr13 41163407 41163524 -79120788 + MLT1F LTR MaLR 194 311 -237 3 899 467 285 138 52 chr13 41163551 41163840 -79120472 + MLT1B LTR MaLR 26 339 -51 3 899 267 281 146 0 chr13 41163838 41163934 -79120378 + ID_B1 SINE B4 79 188 -36 3 899 417 86 0 0 chr13 41163939 41163997 -79120315 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 3 899 367 202 79 56 chr13 41164060 41164149 -79120163 + MLT1B LTR MaLR 1 91 -376 3 899 403 268 21 0 chr13 41164186 41164283 -79120029 - PB1D10 SINE Alu -2 115 17 3 899 653 244 127 85 chr13 41164289 41164388 -79119924 + MLT1B LTR MaLR 82 178 -212 3 899 432 0 0 0 chr13 41164388 41164436 -79119876 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 899 653 244 127 85 chr13 41164436 41164450 -79119862 + MLT1B LTR MaLR 179 185 -205 3 899 567 0 0 0 chr13 41164450 41164513 -79119799 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 3 899 653 244 127 85 chr13 41164513 41164658 -79119654 + MLT1B LTR MaLR 186 352 -38 3 899 603 301 51 64 chr13 41164684 41164851 -79119461 + MLT1B LTR MaLR 316 484 -64 3 899 1585 52 5 0 chr13 41164851 41165042 -79119270 + B2_Mm1t SINE B2 1 192 -1 3 899 603 301 51 64 chr13 41165042 41165108 -79119204 + MLT1B LTR MaLR 485 546 -2 3 899 26 30 0 0 chr13 41166177 41166210 -79118102 + AT_rich Low_complexity Low_complexity 1 33 0 3 899 513 269 96 20 chr13 41167313 41167510 -79116802 + ID_B1 SINE B4 1 212 -12 3 899 297 0 0 0 chr13 41167510 41167543 -79116769 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 3 899 590 242 56 50 chr13 41167708 41167869 -79116443 + RSINE1 SINE B4 4 165 0 3 899 442 207 0 0 chr13 41167878 41167960 -79116352 - ID4_ SINE ID 0 83 2 3 899 206 154 26 0 chr13 41168017 41168056 -79116256 + A-rich Low_complexity Low_complexity 2 41 0 3 899 29 0 0 0 chr13 41169011 41169040 -79115272 + AT_rich Low_complexity Low_complexity 1 29 0 3 899 312 48 0 0 chr13 41169785 41169827 -79114485 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 899 586 177 307 12 chr13 41171433 41171599 -79112713 + B3 SINE B2 1 215 -1 3 899 596 243 169 40 chr13 41171654 41171903 -79112409 + B4A SINE B4 1 281 -11 3 899 888 283 74 21 chr13 41172777 41172966 -79111346 - B4 SINE B4 -5 287 84 3 899 296 48 24 0 chr13 41172966 41173008 -79111304 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 899 888 283 74 21 chr13 41173008 41173060 -79111252 - B4 SINE B4 -209 83 34 3 899 194 62 0 30 chr13 41173642 41173675 -79110637 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 3 899 240 291 93 37 chr13 41173780 41173887 -79110425 - B1F SINE Alu -35 114 2 3 899 24 67 0 0 chr13 41175191 41175236 -79109076 + AT_rich Low_complexity Low_complexity 1 45 0 3 899 689 160 135 17 chr13 41175928 41176106 -79108206 - Lx9 LINE L1 -1 7643 7445 3 899 765 129 22 15 chr13 41176101 41176235 -79108077 - Lx9 LINE L1 -538 7106 6972 3 899 285 164 33 0 chr13 41176235 41176302 -79108010 - B1F1 SINE Alu -38 111 39 3 899 375 239 60 0 chr13 41176805 41176903 -79107409 + B1F SINE Alu 2 107 -42 3 899 587 301 0 7 chr13 41176898 41177042 -79107270 + ID_B1 SINE B4 81 223 -1 3 899 240 35 0 0 chr13 41177090 41177119 -79107193 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 899 749 250 49 60 chr13 41177454 41177739 -79106573 + B4A SINE B4 3 284 -8 3 899 216 0 0 0 chr13 41177749 41177773 -79106539 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 899 240 35 0 0 chr13 41177773 41177801 -79106511 + (TC)n Simple_repeat Simple_repeat 1 29 0 4 899 321 249 0 0 chr13 41177804 41177981 -79106331 + (CA)n Simple_repeat Simple_repeat 1 177 0 4 899 440 200 7 0 chr13 41178027 41178177 -79106135 + (CA)n Simple_repeat Simple_repeat 2 152 0 4 899 231 228 91 97 chr13 41178183 41178348 -79105964 + RLTR40 LTR ERVK 571 734 -83 4 899 627 202 30 15 chr13 41179179 41179310 -79105002 + B1F SINE Alu 1 133 -16 4 899 870 62 0 0 chr13 41179478 41179591 -79104721 + (GAAA)n Simple_repeat Simple_repeat 4 116 0 4 899 320 270 56 0 chr13 41179900 41179989 -79104323 - ID_B1 SINE B4 -2 222 129 4 899 212 140 0 39 chr13 41180163 41180215 -79104097 + (CAGAGA)n Simple_repeat Simple_repeat 5 54 0 4 899 206 231 0 0 chr13 41180304 41180343 -79103969 + (CGTG)n Simple_repeat Simple_repeat 1 39 0 4 899 234 0 0 0 chr13 41180344 41180370 -79103942 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 899 243 125 0 0 chr13 41180736 41180776 -79103536 + (TCCC)n Simple_repeat Simple_repeat 4 43 0 4 899 232 173 37 0 chr13 41180766 41180847 -79103465 + CT-rich Low_complexity Low_complexity 2 85 0 4 899 754 214 7 0 chr13 41181033 41181173 -79103139 - B1F SINE Alu -8 141 1 4 899 4111 198 60 20 chr13 41181184 41182050 -79102262 - Lx6 LINE L1 0 7460 6560 4 899 4576 154 46 6 chr13 41182047 41182856 -79101456 - L1_Mur3 LINE L1 -401 5479 4639 4 899 204 40 0 0 chr13 41182860 41182885 -79101427 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 899 4255 149 56 34 chr13 41182891 41184164 -79100148 - L1_Mur3 LINE L1 -3827 2053 769 4 899 264 30 0 0 chr13 41184164 41184197 -79100115 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 899 4255 159 50 10 chr13 41184197 41184420 -79099892 - L1_Mur3 LINE L1 -6960 768 540 4 899 2580 253 154 21 chr13 41184757 41185702 -79098610 - Lx9 LINE L1 -13 7631 6561 4 899 291 200 0 0 chr13 41185770 41185815 -79098497 - ID4 SINE ID 0 83 39 4 899 300 261 21 141 chr13 41185850 41185915 -79098397 - L1MA5 LINE L1 -12 6288 6232 4 899 277 257 49 10 chr13 41185915 41186017 -79098295 - PB1D10 SINE Alu -7 110 5 4 899 300 261 21 141 chr13 41186017 41186143 -79098169 - L1MA5 LINE L1 -69 6231 6120 4 899 282 223 232 20 chr13 41186149 41186300 -79098012 - L1MC3 LINE L1 -10 7775 7593 4 899 320 248 183 35 chr13 41186342 41186484 -79097828 - RSINE1 SINE B4 0 165 3 4 899 386 268 77 43 chr13 41186540 41186657 -79097655 - RSINE1 SINE B4 -11 154 34 4 899 246 238 178 2 chr13 41188051 41188191 -79096121 + L1MB1 LINE L1 5772 5930 -238 4 899 1004 89 0 37 chr13 41188233 41188420 -79095892 + (GGA)n Simple_repeat Simple_repeat 1 180 0 4 899 231 241 120 43 chr13 41189928 41190045 -79094267 - L1M5 LINE L1 -712 5732 5607 4 899 188 34 0 33 chr13 41190282 41190312 -79094000 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 899 1172 48 0 14 chr13 41190312 41190451 -79093861 - B1_Mm SINE Alu -8 139 2 4 899 318 26 0 0 chr13 41190588 41190627 -79093685 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 899 1099 308 84 28 chr13 41190631 41191322 -79092990 - L1MA5 LINE L1 -26 6274 5545 4 899 262 222 55 7 chr13 41191322 41191467 -79092845 + (TA)n Simple_repeat Simple_repeat 2 153 0 4 899 344 290 71 99 chr13 41191467 41191789 -79092523 - L1M2 LINE L1 -678 5619 5307 4 899 335 243 0 41 chr13 41192216 41192289 -79092023 - ID4 SINE ID -12 71 2 4 899 454 238 219 0 chr13 41193063 41193214 -79091098 + ORR1D2 LTR MaLR 186 369 -1 4 899 604 217 74 18 chr13 41193365 41193545 -79090767 - B3 SINE B2 -5 190 1 4 899 406 252 101 51 chr13 41193547 41193685 -79090627 - B1_Mm SINE Alu -1 146 2 4 899 417 286 94 8 chr13 41193686 41193813 -79090499 - MLT1A0 LTR MaLR -2 363 226 4 899 301 331 43 43 chr13 41193956 41194142 -79090170 + L2a LINE L2 3209 3394 -32 4 899 281 300 32 40 chr13 41194209 41194334 -79089978 + B1F SINE Alu 24 147 -2 4 899 295 248 102 65 chr13 41194321 41194337 -79089975 + MT2B LTR ERVL 152 171 -430 4 899 620 188 144 8 chr13 41194337 41194455 -79089857 + B1_Mur1 SINE Alu 2 135 -14 4 899 198 187 53 0 chr13 41194466 41194541 -79089771 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 4 899 651 67 0 0 chr13 41194547 41194636 -79089676 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 4 899 223 349 119 15 chr13 41194651 41194848 -79089464 - MIRc SINE MIR -26 242 32 4 899 353 205 17 0 chr13 41195061 41195134 -79089178 + MLT2C1 LTR ERVL 425 502 -61 4 899 1982 134 29 93 chr13 41195377 41195754 -79088558 - ORR1B1 LTR MaLR 0 394 42 4 899 313 315 18 18 chr13 41195789 41195902 -79088410 - Tigger5 DNA MER2_type -2274 132 20 4 899 22 0 0 0 chr13 41196815 41196837 -79087475 + AT_rich Low_complexity Low_complexity 1 22 0 4 899 234 136 0 43 chr13 41197055 41197098 -79087214 - PB1D7 SINE Alu -60 60 20 4 899 1272 256 131 25 chr13 41197098 41197542 -79086770 - RMER5 LTR ERV1 0 534 44 4 899 270 0 0 0 chr13 41198018 41198048 -79086264 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 899 606 257 7 13 chr13 41200231 41200381 -79083931 + B1F SINE Alu 1 149 0 4 899 415 326 29 7 chr13 41200496 41200632 -79083680 + B1F1 SINE Alu 11 149 0 4 899 328 288 33 64 chr13 41201447 41201639 -79082673 - MIRb SINE MIR -47 215 27 4 899 1046 116 0 7 chr13 41202232 41202379 -79081933 - B1_Mur4 SINE Alu -2 148 3 4 899 524 273 41 48 chr13 41202383 41202529 -79081783 - ID_B1 SINE B4 0 224 80 4 899 408 97 0 0 chr13 41203099 41203161 -79081151 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 899 222 143 0 0 chr13 41203310 41203359 -79080953 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 899 288 0 0 0 chr13 41203409 41203441 -79080871 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 899 330 91 0 0 chr13 41203441 41203496 -79080816 + (GA)n Simple_repeat Simple_repeat 1 55 0 4 899 441 320 32 25 chr13 41203579 41203736 -79080576 + RSINE1 SINE B4 8 165 0 4 899 22 0 0 0 chr13 41203736 41203758 -79080554 + AT_rich Low_complexity Low_complexity 1 22 0 4 899 476 115 40 32 chr13 41204214 41204468 -79079844 + (CA)n Simple_repeat Simple_repeat 1 256 0 4 899 228 258 0 6 chr13 41204802 41204866 -79079446 - PB1 SINE Alu 0 127 57 4 899 510 31 0 0 chr13 41204870 41204934 -79079378 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 899 375 23 0 0 chr13 41205109 41205153 -79079159 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 899 397 308 12 6 chr13 41205404 41205564 -79078748 + GA-rich Low_complexity Low_complexity 2 162 0 4 899 288 203 27 7 chr13 41205566 41205715 -79078597 + (CAGA)n Simple_repeat Simple_repeat 1 152 0 4 899 207 0 0 0 chr13 41205730 41205753 -79078559 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 899 339 25 0 0 chr13 41205753 41205792 -79078520 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 899 858 149 11 11 chr13 41206433 41206610 -79077702 + CT-rich Low_complexity Low_complexity 1 177 0 4 899 201 121 0 0 chr13 41206992 41207025 -79077287 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 899 23 0 0 0 chr13 41207681 41207704 -79076608 + AT_rich Low_complexity Low_complexity 1 23 0 4 899 234 0 0 0 chr13 41207971 41207997 -79076315 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 899 252 269 55 18 chr13 41208113 41208223 -79076089 + PB1D10 SINE Alu 1 114 -3 4 899 65 43 0 0 chr13 41208460 41208553 -79075759 + AT_rich Low_complexity Low_complexity 1 93 0 4 899 363 44 0 0 chr13 41208943 41208988 -79075324 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 899 216 0 0 0 chr13 41209018 41209042 -79075270 + (T)n Simple_repeat Simple_repeat 1 24 0 4 899 292 182 202 11 chr13 41209056 41209145 -79075167 + PB1D10 SINE Alu 11 116 -1 4 899 243 0 0 0 chr13 41210358 41210385 -79073927 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 899 817 27 216 0 chr13 41210386 41210497 -79073815 - B1_Mus1 SINE Alu -12 136 2 4 899 472 206 98 45 chr13 41210545 41210677 -79073635 - ID_B1 SINE B4 0 224 86 4 899 328 149 182 11 chr13 41211062 41211150 -79073162 + B1_Mus1 SINE Alu 3 105 -43 4 899 1221 147 142 8 chr13 41211225 41211478 -79072834 + RMER1C Other Other 1056 1342 0 4 899 232 327 68 32 chr13 41211941 41212096 -79072216 - L2b LINE L2 -52 3374 3167 4 899 3141 25 0 0 chr13 41212827 41213185 -79071127 - L1Md_T LINE L1 0 6582 6225 4 899 350 220 0 35 chr13 41213193 41213278 -79071034 - ID4 SINE ID 0 83 2 4 899 840 156 14 0 chr13 41213870 41214011 -79070301 + B1_Mus2 SINE Alu 5 147 0 4 899 342 0 0 0 chr13 41214078 41214116 -79070196 + (CAA)n Simple_repeat Simple_repeat 2 39 0 4 899 329 275 12 36 chr13 41214176 41214259 -79070053 - BC1_Mm scRNA scRNA -70 82 2 4 899 343 234 78 0 chr13 41214362 41214439 -79069873 - ID_B1 SINE B4 -12 212 130 4 899 288 311 0 88 chr13 41214580 41214710 -79069602 - PB1D7 SINE Alu -1 119 2 4 899 331 185 22 0 chr13 41215403 41215495 -79068817 + (TG)n Simple_repeat Simple_repeat 2 95 0 4 899 243 146 0 0 chr13 41215492 41215547 -79068765 + (TCTCTG)n Simple_repeat Simple_repeat 2 56 0 4 899 701 133 0 43 chr13 41215554 41215628 -79068684 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 899 222 37 0 0 chr13 41215628 41215655 -79068657 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 4 899 701 133 0 43 chr13 41215655 41215768 -79068544 + (TG)n Simple_repeat Simple_repeat 1 109 0 4 899 240 210 83 36 chr13 41215799 41215831 -79068481 - RSINE1 SINE B4 -1 164 132 4 899 297 0 0 0 chr13 41215831 41215864 -79068448 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 899 240 210 83 36 chr13 41215864 41215915 -79068397 - RSINE1 SINE B4 -34 131 78 4 899 363 43 0 21 chr13 41215915 41215963 -79068349 - HAL1-3A_ME LINE L1 -836 2022 1976 4 899 265 149 30 0 chr13 41216010 41216077 -79068235 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 899 213 65 0 0 chr13 41216077 41216108 -79068204 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 899 535 275 38 4 chr13 41216111 41216255 -79068057 - RSINE1 SINE B4 -148 144 2 5 899 403 326 7 14 chr13 41216295 41216438 -79067874 + ID_B1 SINE B4 82 223 -1 5 899 247 186 0 44 chr13 41216555 41216600 -79067712 + ID4 SINE ID 2 44 -39 5 899 990 181 185 37 chr13 41216859 41217071 -79067241 - MTEa LTR MaLR -69 310 60 5 899 477 0 0 0 chr13 41217071 41217124 -79067188 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 899 990 181 185 37 chr13 41217124 41217181 -79067131 - MTEa LTR MaLR -320 59 1 5 899 192 135 0 0 chr13 41217745 41217782 -79066530 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 899 248 240 0 74 chr13 41217782 41217795 -79066517 - ZP3AR Satellite Satellite -116 96 47 5 899 257 171 0 0 chr13 41217795 41217836 -79066476 - ID4 SINE ID -38 45 5 5 899 306 0 0 0 chr13 41217838 41217872 -79066440 + (TTCTC)n Simple_repeat Simple_repeat 1 34 0 5 899 498 108 0 0 chr13 41217874 41217948 -79066364 + (CCCCCT)n Simple_repeat Simple_repeat 4 77 0 5 899 789 90 0 0 chr13 41217948 41218059 -79066253 + (TTTCC)n Simple_repeat Simple_repeat 2 112 0 5 899 309 226 80 62 chr13 41218322 41218435 -79065877 - PB1D10 SINE Alu -1 116 2 5 899 243 0 0 0 chr13 41219004 41219031 -79065281 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 5 899 2432 74 12 3 chr13 41219634 41219958 -79064354 + ORR1A2 LTR MaLR 1 327 0 5 899 271 309 0 67 chr13 41220321 41220425 -79063887 + MLT1A1 LTR MaLR 312 408 0 5 899 297 316 93 45 chr13 41220840 41221006 -79063306 - MTEb LTR MaLR 0 379 206 5 899 240 325 0 0 chr13 41221426 41221506 -79062806 - Charlie23a DNA MER1_type -231 108 29 5 899 686 289 107 38 chr13 41221532 41221877 -79062435 - MLT1A LTR MaLR -5 369 1 5 899 216 0 0 0 chr13 41222779 41222803 -79061509 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 899 477 0 0 0 chr13 41223019 41223072 -79061240 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 899 222 37 0 0 chr13 41223072 41223098 -79061214 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 899 928 132 0 7 chr13 41223113 41223266 -79061046 - B2_Mm2 SINE B2 -41 154 3 5 899 229 313 21 63 chr13 41223450 41223593 -79060719 + LTR33A LTR ERVL 361 497 -23 5 899 361 125 0 0 chr13 41223752 41223808 -79060504 - 4.5SRNA scRNA scRNA -37 57 2 5 899 967 67 0 29 chr13 41224903 41225041 -79059271 - B1_Mus1 SINE Alu 0 148 15 5 899 327 49 0 0 chr13 41225428 41225469 -79058843 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 5 899 1982 191 106 88 chr13 41226022 41226442 -79057870 - L1_Rod LINE L1 -3944 1903 1472 5 899 1328 159 276 30 chr13 41226442 41226811 -79057501 - RMER6B LTR ERVK 0 461 2 5 899 1982 197 90 64 chr13 41226811 41227426 -79056886 - L1_Rod LINE L1 -4376 1471 828 5 899 910 247 87 4 chr13 41227439 41227691 -79056621 - L1_Rod LINE L1 -6848 760 488 5 899 289 281 0 11 chr13 41227917 41228007 -79056305 - B4 SINE B4 -197 95 7 5 899 257 189 196 0 chr13 41228513 41228601 -79055711 + PB1D7 SINE Alu 13 120 0 5 899 291 157 0 0 chr13 41228601 41228652 -79055660 + A-rich Low_complexity Low_complexity 1 51 0 5 899 901 133 22 0 chr13 41228813 41228948 -79055364 + B1_Mus1 SINE Alu 2 139 -9 5 899 279 0 0 0 chr13 41228948 41228979 -79055333 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 899 511 250 27 0 chr13 41228989 41229101 -79055211 + B3 SINE B2 15 129 -87 5 899 25 31 0 0 chr13 41229135 41229167 -79055145 + AT_rich Low_complexity Low_complexity 1 32 0 5 899 765 265 40 5 chr13 41229808 41230009 -79054303 + ID_B1 SINE B4 1 208 -16 5 899 221 305 0 68 chr13 41230145 41230233 -79054079 - BC1_Mm scRNA scRNA -69 83 2 5 899 495 0 0 0 chr13 41230705 41230760 -79053552 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 899 270 125 0 0 chr13 41230760 41230807 -79053505 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 899 480 263 25 0 chr13 41230828 41230946 -79053366 - B3A SINE B2 -77 121 1 5 899 1489 195 50 179 chr13 41231799 41232279 -79052033 - MTC LTR MaLR -2 419 2 5 899 1210 68 0 0 chr13 41232279 41232426 -79051886 + B1_Mus1 SINE Alu 2 148 0 5 899 210 227 0 0 chr13 41232457 41232501 -79051811 + G-rich Low_complexity Low_complexity 1 44 0 5 899 189 0 0 0 chr13 41232501 41232522 -79051790 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 5 899 312 154 0 0 chr13 41233427 41233479 -79050833 + B4A SINE B4 83 134 -158 5 899 293 250 0 0 chr13 41233438 41233502 -79050810 + B1_Mus1 SINE Alu 10 73 -75 5 899 697 220 173 11 chr13 41233516 41233695 -79050617 - B3 SINE B2 -2 214 7 5 899 279 0 0 0 chr13 41234189 41234220 -79050092 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 899 232 286 97 97 chr13 41234225 41234318 -79049994 - B4 SINE B4 -9 283 191 5 899 3138 31 39 10 chr13 41234380 41234765 -79049547 - MTA_Mm LTR MaLR 0 396 1 5 899 227 306 0 0 chr13 41235770 41235832 -79048480 + B4 SINE B4 12 73 -219 5 899 348 303 96 61 chr13 41235878 41236075 -79048237 + B4 SINE B4 87 290 -2 5 899 603 275 26 26 chr13 41236105 41236258 -79048054 + RSINE1 SINE B4 13 165 0 5 899 742 220 31 14 chr13 41237459 41237670 -79046642 - B3A SINE B2 -3 213 1 5 899 321 236 0 14 chr13 41237681 41237754 -79046558 - tRNA-Glu-GAG_ tRNA tRNA -3 72 1 5 899 221 0 35 0 chr13 41238123 41238152 -79046160 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 899 1004 72 0 0 chr13 41238277 41238415 -79045897 + B1_Mus2 SINE Alu 10 147 0 5 899 216 0 0 0 chr13 41238415 41238439 -79045873 + (A)n Simple_repeat Simple_repeat 1 24 0 5 899 942 78 0 0 chr13 41238968 41239096 -79045216 + (TCTA)n Simple_repeat Simple_repeat 3 130 0 5 899 258 32 0 0 chr13 41239096 41239126 -79045186 + (CCCA)n Simple_repeat Simple_repeat 2 32 0 5 899 209 217 22 0 chr13 41239129 41239175 -79045137 + CT-rich Low_complexity Low_complexity 2 48 0 5 899 791 144 68 0 chr13 41239203 41239335 -79044977 - B1_Mm SINE Alu -6 141 1 5 899 318 206 0 0 chr13 41240320 41240388 -79043924 + T-rich Low_complexity Low_complexity 3 70 0 5 899 367 169 48 30 chr13 41240401 41240566 -79043746 + CT-rich Low_complexity Low_complexity 1 168 0 5 899 2484 143 52 2 chr13 41240674 41241074 -79043238 - RLTR9B2 LTR ERVK 0 420 1 5 899 3249 137 11 14 chr13 41242059 41242614 -79041698 + RLTR1D LTR ERV1 37 589 -16 5 899 2207 158 35 8 chr13 41242976 41243378 -79040934 - MTC LTR MaLR -8 413 1 5 899 244 316 74 25 chr13 41243506 41243668 -79040644 + L1MA6 LINE L1 6131 6300 0 5 899 267 123 48 24 chr13 41244077 41244160 -79040152 + CT-rich Low_complexity Low_complexity 3 87 0 5 899 509 328 55 0 chr13 41244557 41244758 -79039554 + L1M5 LINE L1 5574 5785 -379 5 899 186 43 0 0 chr13 41244824 41244847 -79039465 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 899 298 256 8 55 chr13 41244853 41244981 -79039331 - RMER12 LTR ERVK -477 845 724 5 899 388 202 132 78 chr13 41245178 41245307 -79039005 - L1M3 LINE L1 -507 5664 5529 5 899 240 35 0 0 chr13 41245771 41245800 -79038512 + (AGGGGG)n Simple_repeat Simple_repeat 3 31 0 5 899 554 183 25 25 chr13 41246684 41246802 -79037510 + PB1D7 SINE Alu 3 120 0 5 899 26 0 0 0 chr13 41247859 41247885 -79036427 + AT_rich Low_complexity Low_complexity 1 26 0 5 899 289 298 66 8 chr13 41248341 41248409 -79035903 + B4 SINE B4 24 152 -140 5 899 385 56 0 0 chr13 41248409 41248463 -79035849 + B1_Mus2 SINE Alu 14 67 -80 5 899 539 29 14 0 chr13 41249272 41249341 -79034971 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 899 441 330 129 18 chr13 41249650 41249875 -79034437 - MER2 DNA MER2_type -4 341 92 5 899 195 275 139 16 chr13 41250330 41250452 -79033860 - MER5A DNA MER1_type -13 176 40 5 899 1191 121 15 26 chr13 41250551 41250746 -79033566 - B2_Mm2 SINE B2 -1 194 2 5 899 330 67 0 0 chr13 41251101 41251146 -79033166 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 899 468 298 79 7 chr13 41251169 41251321 -79032991 - RSINE1 SINE B4 0 165 3 5 899 408 262 76 27 chr13 41251624 41251808 -79032504 + L1M3 LINE L1 3478 3670 -2470 5 899 1729 227 31 39 chr13 41251877 41252302 -79032010 + MTD LTR MaLR 1 405 -14 5 899 492 270 204 45 chr13 41252302 41252659 -79031653 + L1M3 LINE L1 3741 4154 -1986 5 899 339 202 23 22 chr13 41253743 41253867 -79030445 + L1MA9 LINE L1 2868 3004 -3142 5 899 600 234 120 16 chr13 41253870 41254061 -79030251 + B3 SINE B2 2 212 -4 5 899 1282 194 63 21 chr13 41254150 41254435 -79029877 - RMER1C Other Other -1 1341 1045 5 899 562 147 147 0 chr13 41254479 41254588 -79029724 - B3 SINE B2 -86 130 6 5 899 292 140 20 0 chr13 41254610 41254660 -79029652 - RMER1C Other Other -293 1049 999 5 899 21 36 0 0 chr13 41254709 41254737 -79029575 + AT_rich Low_complexity Low_complexity 1 28 0 5 899 603 261 151 41 chr13 41254808 41255219 -79029093 + L1MA9 LINE L1 3179 3634 -2509 5 899 336 175 0 0 chr13 41255225 41255288 -79029024 - B4A SINE B4 -12 280 218 5 899 245 333 0 61 chr13 41255494 41255593 -79028719 - B4 SINE B4 -188 104 12 5 899 340 248 136 31 chr13 41255620 41255782 -79028530 + L1MA9 LINE L1 3642 3820 -2323 5 899 890 296 103 40 chr13 41255942 41256512 -79027800 + L1MA5 LINE L1 5432 6037 -263 5 899 709 307 137 27 chr13 41256574 41257194 -79027118 + L1MA9 LINE L1 4314 5001 -1142 5 899 270 244 39 0 chr13 41257212 41257290 -79027022 + L1MA9 LINE L1 5703 5783 -514 5 899 589 246 42 0 chr13 41257290 41257432 -79026880 + B3 SINE B2 1 148 -68 5 899 406 168 130 32 chr13 41257473 41257596 -79026716 + Lx4B LINE L1 6907 7041 -17 5 899 520 204 0 0 chr13 41257726 41257824 -79026488 - B3 SINE B2 0 216 119 5 899 434 264 118 23 chr13 41257853 41258074 -79026238 + L1MA9 LINE L1 5817 6058 -254 5 899 21 71 0 0 chr13 41258739 41258781 -79025531 + AT_rich Low_complexity Low_complexity 1 42 0 5 899 1081 251 42 50 chr13 41258846 41259381 -79024931 - L1_Rod LINE L1 -4388 1459 926 5 899 776 300 119 21 chr13 41259940 41260369 -79023943 - L1M2 LINE L1 -514 5783 5313 6 899 10732 70 20 36 chr13 41260439 41260952 -79023360 - MusHAL1 LINE L1 -626 2086 1588 6 899 1248 48 0 0 chr13 41260952 41261099 -79023213 + B1_Mus2 SINE Alu 1 147 0 6 899 10732 70 20 36 chr13 41261099 41262158 -79022154 - MusHAL1 LINE L1 -1125 1587 538 6 899 4978 91 12 13 chr13 41262150 41262827 -79021485 - L1VL2 LINE L1 -5499 836 161 6 899 355 372 38 28 chr13 41262824 41263219 -79021093 - L1M2 LINE L1 -813 5330 4932 6 899 253 253 65 102 chr13 41263254 41263470 -79020842 + L1M2 LINE L1 4564 4771 -1372 6 899 5542 56 34 9 chr13 41263468 41264223 -79020089 - MusHAL1 LINE L1 -1401 1311 538 6 899 4978 91 12 13 chr13 41264215 41264892 -79019420 - L1VL2 LINE L1 -5499 836 161 6 899 355 372 38 28 chr13 41264889 41265284 -79019028 - L1M2 LINE L1 -813 5330 4932 6 899 312 248 72 92 chr13 41265319 41265568 -79018744 + L1M2 LINE L1 4564 4807 -1336 6 899 514 317 91 42 chr13 41265937 41266420 -79017892 + Lx8 LINE L1 6879 7516 -128 6 899 582 221 0 0 chr13 41266426 41266639 -79017673 + (TG)n Simple_repeat Simple_repeat 1 213 0 6 899 471 294 33 40 chr13 41267579 41267731 -79016581 - RSINE1 SINE B4 -10 155 5 6 899 279 0 0 0 chr13 41267948 41267979 -79016333 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 6 899 351 266 38 30 chr13 41268153 41268285 -79016027 + L1MA7 LINE L1 5898 6030 -261 6 899 681 209 7 21 chr13 41269883 41270025 -79014287 - B1_Mur3 SINE Alu -9 140 1 6 899 375 307 114 21 chr13 41270082 41270222 -79014090 - RSINE1 SINE B4 -11 154 2 6 899 307 301 93 53 chr13 41270416 41270567 -79013745 - Charlie1 DNA MER1_type -2619 162 6 6 899 2842 147 133 8 chr13 41270701 41271221 -79013091 + RMER4B LTR ERVK 1 585 0 6 899 342 277 35 58 chr13 41271297 41271682 -79012630 - RLTR15 LTR ERVK 0 359 33 6 899 417 276 95 0 chr13 41272527 41272643 -79011669 + RSINE1 SINE B4 39 165 0 6 899 683 184 26 12 chr13 41272650 41272992 -79011320 + (CATA)n Simple_repeat Simple_repeat 1 347 0 6 899 935 189 73 5 chr13 41273034 41273225 -79011087 + B3 SINE B2 5 208 -8 6 899 374 297 24 66 chr13 41275311 41275402 -79008910 - ORR1E LTR MaLR -194 165 82 6 899 1124 190 42 0 chr13 41275402 41275618 -79008694 - URR1B DNA MER1_type 0 225 1 6 899 374 297 24 66 chr13 41275618 41275692 -79008620 - ORR1E LTR MaLR -278 81 7 6 899 428 293 17 0 chr13 41276610 41276726 -79007586 + ORR1E LTR MaLR 4 121 -238 6 899 298 294 11 3 chr13 41277029 41277131 -79007181 - B1F SINE Alu -47 103 2 6 899 211 258 30 0 chr13 41277518 41277584 -79006728 + (TATAG)n Simple_repeat Simple_repeat 2 69 0 6 899 211 135 16 148 chr13 41279938 41279999 -79004313 - PB1 SINE Alu -9 118 66 6 899 234 283 19 0 chr13 41279971 41280024 -79004288 - B1F1 SINE Alu -95 54 1 6 899 180 111 0 0 chr13 41280608 41280635 -79003677 + (CCG)n Simple_repeat Simple_repeat 2 28 0 6 899 411 257 86 0 chr13 41281274 41281379 -79002933 - ID_B1 SINE B4 -2 222 109 6 899 347 408 36 9 chr13 41283889 41284109 -79000203 + Tigger5 DNA MER2_type 12 237 -2169 6 899 290 340 28 37 chr13 41284116 41284223 -79000089 + Tigger5 DNA MER2_type 2301 2406 0 6 899 225 274 65 0 chr13 41284360 41284422 -78999890 - tRNA-Ala-GCY_ tRNA tRNA -7 68 3 6 899 224 216 0 3 chr13 41284817 41284866 -78999446 - PB1D9 SINE Alu -95 53 6 6 899 240 270 97 29 chr13 41286219 41286322 -78997990 - L1MC5 LINE L1 -1086 6875 6766 6 900 211 353 85 35 chr13 41287786 41287927 -78996385 - MIR3 SINE MIR -43 165 18 6 900 450 53 0 0 chr13 41288426 41288483 -78995829 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 900 261 0 0 0 chr13 41288856 41288885 -78995427 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 900 756 216 0 7 chr13 41288886 41289021 -78995291 + B1_Mur4 SINE Alu 17 150 0 6 900 451 269 131 6 chr13 41290360 41290543 -78993769 - Tigger7 DNA MER2_type -1946 545 340 6 900 497 247 176 34 chr13 41290589 41290765 -78993547 - Tigger7 DNA MER2_type -2280 211 11 6 900 245 310 0 94 chr13 41290969 41291065 -78993247 + MT2B LTR ERVL 152 238 -363 6 900 460 231 21 63 chr13 41290984 41291116 -78993196 + PB1D9 SINE Alu 5 132 -16 6 900 754 251 28 24 chr13 41291124 41291336 -78992976 + B3 SINE B2 2 214 -2 6 900 213 65 0 0 chr13 41291337 41291368 -78992944 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 6 900 432 82 0 0 chr13 41294520 41294581 -78989731 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 900 325 293 59 12 chr13 41294585 41294754 -78989558 + L1MEe LINE L1 1680 1868 -4471 6 900 369 241 11 11 chr13 41297007 41297095 -78987217 + PB1D10 SINE Alu 30 117 0 6 900 28 71 0 0 chr13 41297750 41297806 -78986506 + AT_rich Low_complexity Low_complexity 1 56 0 6 900 412 236 204 21 chr13 41297848 41298034 -78986278 + Lx8 LINE L1 5345 5564 -283 6 900 227 276 77 8 chr13 41298177 41298294 -78986018 + Lx8 LINE L1 5782 5906 -1567 6 900 651 26 0 0 chr13 41300830 41300907 -78983405 + (TTCTC)n Simple_repeat Simple_repeat 4 80 0 6 900 204 158 0 0 chr13 41303898 41303936 -78980376 + (TTA)n Simple_repeat Simple_repeat 2 39 0 6 900 380 276 72 36 chr13 41303964 41304103 -78980209 - RSINE1 SINE B4 -19 146 3 6 900 254 250 28 56 chr13 41304204 41304276 -78980036 - BC1_Mm scRNA scRNA -81 71 2 6 900 878 261 14 41 chr13 41304847 41305067 -78979245 + B4 SINE B4 79 292 0 6 900 337 211 105 9 chr13 41309137 41309242 -78975070 + PB1D7 SINE Alu 2 116 -4 6 900 219 78 59 0 chr13 41309802 41309853 -78974459 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 900 220 365 0 0 chr13 41310327 41310390 -78973922 + MIR SINE MIR 83 145 -63 6 900 1014 262 18 39 chr13 41310570 41310852 -78973460 - B4A SINE B4 -14 278 3 6 900 234 0 0 0 chr13 41312323 41312349 -78971963 + (A)n Simple_repeat Simple_repeat 1 26 0 6 900 532 297 88 101 chr13 41312681 41312792 -78971520 + MER33 DNA MER1_type 6 104 -220 6 900 375 250 104 15 chr13 41312792 41312926 -78971386 - B1F SINE Alu -1 148 3 6 900 532 297 88 101 chr13 41312926 41313132 -78971180 + MER33 DNA MER1_type 105 319 -5 6 900 320 223 113 28 chr13 41313190 41313296 -78971016 - B1F1 SINE Alu -8 141 27 6 900 367 240 92 46 chr13 41313888 41313987 -78970325 + PB1D7 SINE Alu 7 113 -7 6 900 486 0 0 0 chr13 41313987 41314041 -78970271 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 6 900 333 0 0 0 chr13 41314681 41314718 -78969594 + (GA)n Simple_repeat Simple_repeat 2 38 0 6 900 279 0 0 0 chr13 41315052 41315083 -78969229 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 900 536 144 0 0 chr13 41315379 41315469 -78968843 - PB1D7 SINE Alu -3 117 28 6 900 242 240 23 46 chr13 41315773 41315904 -78968408 + (CCCCG)n Simple_repeat Simple_repeat 4 131 0 6 900 34 96 0 0 chr13 41315936 41316040 -78968272 + GC_rich Low_complexity Low_complexity 1 104 0 6 900 560 252 7 41 chr13 41316220 41316365 -78967947 + ID_B1 SINE B4 84 223 -1 6 900 599 264 406 30 chr13 41316947 41317177 -78967135 + MTEa LTR MaLR 1 317 -62 6 900 916 239 294 12 chr13 41317178 41317504 -78966808 - MTD LTR MaLR -1 418 1 6 900 952 274 21 8 chr13 41317618 41317861 -78966451 + Lx8 LINE L1 6357 6602 -871 6 900 1491 142 233 7 chr13 41317861 41318162 -78966150 + ORR1B1 LTR MaLR 13 382 -12 6 900 908 228 0 52 chr13 41318171 41318384 -78965928 + Lx8 LINE L1 6606 6807 -666 6 900 1002 261 158 27 chr13 41318395 41318730 -78965582 - MTD LTR MaLR 0 419 41 6 900 1542 301 55 37 chr13 41318753 41319377 -78964935 + Lx8 LINE L1 6839 7473 0 6 900 630 319 18 44 chr13 41320170 41320396 -78963916 + B4A SINE B4 66 285 -7 6 900 369 0 0 0 chr13 41320399 41320440 -78963872 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 900 215 277 46 0 chr13 41320852 41320917 -78963395 + B4A SINE B4 78 145 -147 6 900 376 258 93 0 chr13 41320865 41320962 -78963350 + PB1D9 SINE Alu 7 112 -8 6 900 338 282 79 70 chr13 41321033 41321262 -78963050 - L1MC5 LINE L1 -101 7860 7630 6 900 491 286 127 116 chr13 41321308 41321798 -78962514 - L1MC5 LINE L1 -417 7544 7050 6 900 221 250 0 20 chr13 41321933 41321982 -78962330 + PB1 SINE Alu 73 120 -7 6 900 212 0 0 35 chr13 41322721 41322750 -78961562 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 6 900 1813 107 162 3 chr13 41322825 41323133 -78961179 + RLTR9A LTR ERVK 10 366 -2 6 900 457 324 29 0 chr13 41323934 41324070 -78960242 - B1F SINE Alu -5 144 5 6 900 335 314 59 8 chr13 41324267 41324386 -78959926 - L1MC5 LINE L1 -1135 6650 6526 6 900 384 283 105 56 chr13 41324433 41324699 -78959613 + B4 SINE B4 3 281 -11 6 900 232 263 0 26 chr13 41324849 41324927 -78959385 - L1MEc LINE L1 -4289 2111 2036 6 900 360 286 26 18 chr13 41325046 41325160 -78959152 + PB1D10 SINE Alu 1 115 -2 6 900 430 363 45 41 chr13 41325189 41325456 -78958856 - L1MEc LINE L1 -4354 2046 1779 6 900 188 0 74 0 chr13 41325546 41325573 -78958739 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 900 1182 37 0 0 chr13 41325573 41325708 -78958604 - B1_Mm SINE Alu -11 136 2 6 900 287 274 114 114 chr13 41325755 41325982 -78958330 + MLT1H1 LTR MaLR 89 315 -264 6 900 389 333 0 29 chr13 41325993 41326129 -78958183 + MLT1H1 LTR MaLR 334 465 -90 6 900 765 268 65 47 chr13 41326261 41326476 -78957836 + MTEa LTR MaLR 1 219 -160 6 900 400 352 74 0 chr13 41327230 41327392 -78956920 - ORR1E LTR MaLR -185 174 1 6 900 336 289 0 0 chr13 41327555 41327638 -78956674 + B4 SINE B4 1 83 -209 6 900 316 289 107 54 chr13 41327645 41327850 -78956462 + RLTR12B LTR ERVK 275 490 -38 6 900 544 312 96 11 chr13 41327877 41328055 -78956257 + B4 SINE B4 95 287 -5 6 900 259 261 21 11 chr13 41328389 41328482 -78955830 + CT-rich Low_complexity Low_complexity 1 94 0 6 900 947 292 73 38 chr13 41328681 41329023 -78955289 - MTEb LTR MaLR -25 354 1 6 900 227 316 20 40 chr13 41329041 41329130 -78955182 + MLT1B LTR MaLR 137 223 -151 6 900 531 314 14 7 chr13 41329130 41329268 -78955044 + RSINE1 SINE B4 3 141 -24 6 900 363 44 0 0 chr13 41329275 41329320 -78954992 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 900 218 176 20 0 chr13 41329320 41329371 -78954941 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 6 900 1080 95 7 0 chr13 41329428 41329575 -78954737 - B1_Mus1 SINE Alu 0 148 1 7 900 254 333 57 32 chr13 41329610 41329734 -78954578 + MLT1B LTR MaLR 247 373 -17 6 900 308 272 62 0 chr13 41329969 41330050 -78954262 - L1MEg LINE L1 -4132 1952 1867 7 900 921 199 10 106 chr13 41330491 41330699 -78953613 - B3A SINE B2 -10 188 1 7 900 257 250 0 0 chr13 41330738 41330794 -78953518 - ID4_ SINE ID -1 82 27 7 900 228 278 11 32 chr13 41330894 41330987 -78953325 - L1MC5 LINE L1 -384 7577 7487 7 900 278 286 11 35 chr13 41331150 41331237 -78953075 - BC1_Mm scRNA scRNA -67 85 1 7 900 280 308 92 30 chr13 41331240 41331404 -78952908 - MIRb SINE MIR -69 199 26 7 900 893 189 117 61 chr13 41332567 41332781 -78951531 - URR1A DNA MER1_type 0 226 1 7 900 2203 211 112 48 chr13 41333030 41333718 -78950594 - RMER1B Other Other -2 1064 115 7 900 805 255 63 10 chr13 41333858 41334064 -78950248 + ID_B1 SINE B4 8 224 0 7 900 252 0 0 0 chr13 41334167 41334195 -78950117 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 900 214 143 35 35 chr13 41335060 41335118 -78949194 + GA-rich Low_complexity Low_complexity 3 60 0 7 900 573 284 27 123 chr13 41335418 41335719 -78948593 + ORR1E LTR MaLR 79 350 -9 7 900 315 330 8 0 chr13 41336528 41336646 -78947666 + PB1D7 SINE Alu 1 119 -1 7 900 430 279 56 6 chr13 41336699 41336861 -78947451 - Charlie7 DNA MER1_type -513 2099 1930 7 900 530 278 30 0 chr13 41336935 41337068 -78947244 - B1_Mur1 SINE Alu -11 138 2 7 900 378 0 0 0 chr13 41337139 41337181 -78947131 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 900 947 191 55 0 chr13 41337346 41337545 -78946767 + URR1A DNA MER1_type 17 226 0 7 900 445 197 28 0 chr13 41337614 41337871 -78946441 + (TAGA)n Simple_repeat Simple_repeat 1 264 0 7 900 591 112 0 0 chr13 41337912 41338001 -78946311 + (GGAA)n Simple_repeat Simple_repeat 1 89 0 7 900 283 191 48 120 chr13 41338020 41338145 -78946167 - MTEa LTR MaLR -24 355 240 7 900 28 48 0 0 chr13 41338478 41338520 -78945792 + AT_rich Low_complexity Low_complexity 1 42 0 7 900 1761 125 3 71 chr13 41338659 41338996 -78945316 - ORR1A4 LTR MaLR 0 329 16 7 900 845 43 17 17 chr13 41338996 41339115 -78945197 + B1_Mus2 SINE Alu 29 147 0 7 900 304 164 63 76 chr13 41339597 41339676 -78944636 + PB1D10 SINE Alu 32 109 -8 7 900 225 0 0 0 chr13 41339677 41339702 -78944610 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 900 1119 96 0 7 chr13 41340466 41340613 -78943699 - B1_Mus1 SINE Alu 0 148 3 7 900 258 331 0 38 chr13 41341061 41341193 -78943119 - L1MA6 LINE L1 -262 6038 5912 7 900 320 357 73 37 chr13 41341200 41341418 -78942894 - RMER15 LTR ERVL -7 568 343 7 900 24 0 0 0 chr13 41341840 41341864 -78942448 + AT_rich Low_complexity Low_complexity 1 24 0 7 900 360 175 225 0 chr13 41341922 41342002 -78942310 - B3A SINE B2 -63 135 38 7 900 1492 247 109 52 chr13 41342057 41342655 -78941657 - L1MA8 LINE L1 -150 6141 5510 7 900 200 296 0 0 chr13 41342658 41342702 -78941610 + polypyrimidine Low_complexity Low_complexity 2 45 0 7 900 222 283 136 39 chr13 41342708 41342736 -78941576 - B1_Mur1 SINE Alu -5 144 118 7 900 3231 53 5 5 chr13 41342736 41343132 -78941180 - MTA_Mm LTR MaLR 0 396 1 7 900 310 278 0 62 chr13 41343132 41343195 -78941117 - ID_B1 SINE B4 -29 195 134 7 900 222 283 136 39 chr13 41343195 41343206 -78941106 - B1_Mur1 SINE Alu -32 117 32 7 900 241 374 52 0 chr13 41343640 41343755 -78940557 + L2a LINE L2 3044 3164 -262 7 900 1050 97 132 6 chr13 41343861 41344027 -78940285 - B2_Mm1t SINE B2 -6 187 1 7 900 324 0 0 0 chr13 41346131 41346167 -78938145 + (A)n Simple_repeat Simple_repeat 1 36 0 7 900 667 211 0 8 chr13 41346699 41346823 -78937489 - B1_Mur1 SINE Alu -7 142 20 7 900 1060 61 0 0 chr13 41346832 41346963 -78937349 + B1_Mus1 SINE Alu 2 132 -16 7 900 238 254 295 27 chr13 41347075 41347225 -78937087 - ID_B1 SINE B4 -1 223 34 7 900 307 204 254 18 chr13 41347773 41347883 -78936429 - MLT1B LTR MaLR -139 251 116 7 900 1155 55 0 20 chr13 41348091 41348239 -78936073 - B1_Mus2 SINE Alu 0 147 3 7 900 758 188 0 15 chr13 41348699 41348834 -78935478 - B1_Mur4 SINE Alu -13 137 5 7 900 439 286 131 51 chr13 41349216 41349529 -78934783 - HAL1 LINE L1 -720 1787 1450 7 900 234 0 0 0 chr13 41349734 41349760 -78934552 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7 900 849 103 7 14 chr13 41349904 41350042 -78934270 + B1_Mus1 SINE Alu 10 146 -2 7 900 26 0 0 0 chr13 41350760 41350786 -78933526 + AT_rich Low_complexity Low_complexity 1 26 0 7 900 249 57 0 0 chr13 41351189 41351224 -78933088 + (TGG)n Simple_repeat Simple_repeat 2 36 0 7 900 196 325 57 49 chr13 41351654 41351777 -78932535 + L2a LINE L2 3278 3401 -25 7 900 487 257 0 0 chr13 41352238 41352347 -78931965 - PB1D9 SINE Alu -10 110 2 7 900 1264 80 26 36 chr13 41352597 41352791 -78931521 + B2_Mm2 SINE B2 2 193 -2 7 900 350 301 0 10 chr13 41353104 41353208 -78931104 + MER21B LTR ERV1 129 231 -632 7 900 190 308 76 11 chr13 41353253 41353345 -78930967 + L2 LINE L2 2445 2542 -877 7 900 1500 81 22 5 chr13 41353773 41353996 -78930316 - ORR1A2 LTR MaLR -8 319 93 7 900 20549 21 0 0 chr13 41354004 41357027 -78927285 - L1Md_T LINE L1 0 6582 3560 7 900 661 161 91 24 chr13 41357027 41357192 -78927120 - ORR1A2 LTR MaLR -150 177 2 7 900 487 250 0 9 chr13 41357419 41357528 -78926784 - B1_Mur1 SINE Alu -33 116 9 7 900 1127 199 64 27 chr13 41357929 41358259 -78926053 - RLTR15 LTR ERVK -17 342 1 7 900 449 202 21 11 chr13 41358287 41358382 -78925930 + PB1D7 SINE Alu 12 107 -13 7 900 31 26 0 0 chr13 41358382 41358420 -78925892 + AT_rich Low_complexity Low_complexity 1 38 0 7 900 1210 48 0 0 chr13 41358420 41358566 -78925746 - B1_Mus2 SINE Alu 0 147 2 7 900 302 229 0 0 chr13 41358745 41358815 -78925497 + CT-rich Low_complexity Low_complexity 1 70 0 7 900 1890 162 113 11 chr13 41360138 41360518 -78923794 - MTD LTR MaLR 0 419 1 7 900 187 274 0 0 chr13 41360689 41360740 -78923572 - MER5B DNA MER1_type -3 175 125 7 900 634 159 126 22 chr13 41360746 41360881 -78923431 + B1_Mur2 SINE Alu 1 149 0 7 900 1607 53 0 0 chr13 41361824 41362012 -78922300 - B2_Mm1a SINE B2 -4 189 2 7 900 344 198 99 45 chr13 41362052 41362163 -78922149 - PB1D10 SINE Alu 0 117 1 7 900 558 248 43 7 chr13 41362198 41362336 -78921976 + B1F SINE Alu 1 143 -6 7 900 480 77 0 0 chr13 41362351 41362416 -78921896 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 900 296 256 0 37 chr13 41363890 41363971 -78920341 - B3 SINE B2 -68 148 71 7 900 273 255 250 18 chr13 41364091 41364262 -78920050 + L1MB7 LINE L1 4627 4847 -1299 7 900 1294 106 11 5 chr13 41364262 41364452 -78919860 - B2_Mm2 SINE B2 -3 192 2 7 900 355 259 259 36 chr13 41364452 41364765 -78919547 + L1MB7 LINE L1 4848 5220 -926 7 900 374 254 127 86 chr13 41364828 41365095 -78919217 + L1MB7 LINE L1 5289 5566 -608 7 900 688 221 21 0 chr13 41365431 41365571 -78918741 - B1_Mur1 SINE Alu -5 144 2 7 900 887 260 14 5 chr13 41365629 41365849 -78918463 - ID_B1 SINE B4 0 224 3 7 900 373 275 113 0 chr13 41365860 41366002 -78918310 + L1MB7 LINE L1 6027 6184 0 7 900 592 167 34 61 chr13 41366670 41366739 -78917573 + URR1B DNA MER1_type 83 154 -71 7 900 2829 50 43 93 chr13 41366739 41366975 -78917337 - MTB LTR MaLR 0 400 197 7 900 1215 27 0 20 chr13 41366975 41367125 -78917187 - B1_Mm SINE Alu 0 147 1 7 900 2829 50 43 93 chr13 41367125 41367309 -78917003 - MTB LTR MaLR -204 196 1 7 900 592 167 34 61 chr13 41367309 41367386 -78916926 + URR1B DNA MER1_type 155 225 0 7 900 284 162 37 86 chr13 41367616 41367697 -78916615 - PB1D10 SINE Alu -37 112 36 7 900 189 107 0 0 chr13 41368389 41368417 -78915895 + (TTTC)n Simple_repeat Simple_repeat 2 29 0 7 900 2018 272 40 11 chr13 41368530 41369098 -78915214 + Kanga1 DNA Tc2 93 677 -1068 7 900 345 295 225 6 chr13 41369094 41369418 -78914894 + Kanga1 DNA Tc2 1346 1740 -5 7 900 23 54 0 0 chr13 41370169 41370206 -78914106 + AT_rich Low_complexity Low_complexity 1 37 0 7 900 260 273 0 0 chr13 41370977 41371032 -78913280 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 900 21 0 0 0 chr13 41372068 41372089 -78912223 + AT_rich Low_complexity Low_complexity 1 21 0 7 900 399 192 154 31 chr13 41372725 41372917 -78911395 + RLTR11B LTR ERVK 1 207 -234 7 900 4336 123 43 8 chr13 41373306 41374074 -78910238 + RMER17D LTR ERVK 92 886 -3 7 900 1077 161 82 68 chr13 41374713 41375067 -78909245 - RMER17C LTR ERVK 0 410 52 7 900 880 67 8 0 chr13 41375067 41375187 -78909125 + B1_Mm SINE Alu 27 147 0 7 900 264 59 0 0 chr13 41375187 41375221 -78909091 + (A)n Simple_repeat Simple_repeat 1 34 0 7 900 345 140 0 0 chr13 41375642 41375699 -78908613 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 7 900 2001 211 113 36 chr13 41375901 41376456 -78907856 - RMER20B LTR ERVK -20 607 10 7 900 663 13 0 0 chr13 41376565 41376641 -78907671 + (TTCC)n Simple_repeat Simple_repeat 4 79 0 7 900 247 274 55 0 chr13 41376900 41376973 -78907339 + B4A SINE B4 1 77 -215 7 900 373 249 4 6 chr13 41377057 41377160 -78907152 + B4A SINE B4 110 212 -80 7 900 639 0 0 0 chr13 41377160 41377231 -78907081 + (GA)n Simple_repeat Simple_repeat 1 71 0 7 900 222 37 0 0 chr13 41377232 41377259 -78907053 + (GAAAA)n Simple_repeat Simple_repeat 5 31 0 7 900 416 104 15 0 chr13 41377383 41377450 -78906862 + (TA)n Simple_repeat Simple_repeat 2 69 0 7 900 387 0 0 0 chr13 41377465 41377508 -78906804 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 900 237 83 0 0 chr13 41378548 41378584 -78905728 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 7 900 858 27 0 9 chr13 41378584 41378696 -78905616 - B1_Mus1 SINE Alu -13 135 25 7 900 355 255 0 78 chr13 41378598 41378713 -78905599 - MT2B LTR ERVL -325 276 171 8 900 264 200 0 0 chr13 41379886 41379941 -78904371 + GA-rich Low_complexity Low_complexity 3 57 0 8 900 479 319 6 12 chr13 41380065 41380227 -78904085 + RSINE1 SINE B4 5 165 0 8 900 200 40 0 0 chr13 41380227 41380252 -78904060 + (CAGA)n Simple_repeat Simple_repeat 3 27 0 8 900 387 89 0 0 chr13 41380252 41380308 -78904004 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 900 3676 160 110 17 chr13 41380600 41381764 -78902548 + Lx9 LINE L1 6299 7570 -74 8 900 860 100 80 7 chr13 41382344 41382495 -78901817 + L1_Mus3 LINE L1 6475 6636 -2 8 900 297 0 0 0 chr13 41382905 41382938 -78901374 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 900 896 41 8 0 chr13 41383384 41383505 -78900807 - B1_Mus2 SINE Alu -1 146 25 8 900 619 214 68 8 chr13 41383547 41383702 -78900610 - ID_B1 SINE B4 -47 245 80 8 900 255 258 97 83 chr13 41383595 41383739 -78900573 - MT2B2 LTR ERVL -316 268 123 8 900 690 277 0 77 chr13 41384195 41384344 -78899968 + B4 SINE B4 102 250 -42 8 900 3102 122 51 20 chr13 41384344 41384852 -78899460 + RLTR11A LTR ERVK 1 524 -4 8 900 690 277 0 77 chr13 41384852 41384894 -78899418 + B4 SINE B4 251 278 -14 8 900 1209 83 0 0 chr13 41384894 41385074 -78899238 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 900 690 277 0 77 chr13 41385074 41385088 -78899224 + B4 SINE B4 279 292 0 8 900 532 311 118 28 chr13 41385316 41385749 -78898563 + L1M4 LINE L1 4647 5118 -1028 8 900 378 294 10 0 chr13 41385756 41385858 -78898454 - MTE2b LTR MaLR -7 372 270 8 900 493 180 4 13 chr13 41385861 41385971 -78898341 - MTC LTR MaLR -2 419 260 8 900 868 122 0 34 chr13 41385979 41386157 -78898155 + T-rich Low_complexity Low_complexity 4 175 0 8 900 516 257 0 0 chr13 41386199 41386300 -78898012 - PB1D7 SINE Alu -15 105 5 8 900 259 291 29 0 chr13 41386306 41386409 -78897903 + L1MB7 LINE L1 6077 6182 -2 8 900 261 241 146 12 chr13 41386665 41386828 -78897484 + L1MEg LINE L1 925 1088 -5031 8 900 495 0 0 0 chr13 41387658 41387713 -78896599 + (TC)n Simple_repeat Simple_repeat 2 56 0 8 900 358 311 59 22 chr13 41388231 41388366 -78895946 - RSINE1 SINE B4 -18 147 8 8 900 794 260 57 51 chr13 41389629 41389945 -78894367 - RMER5 LTR ERV1 -56 478 161 8 900 419 313 13 7 chr13 41389979 41390130 -78894182 - L1MA4 LINE L1 -349 5951 5800 8 900 326 330 10 10 chr13 41390174 41390275 -78894037 - PB1D10 SINE Alu -16 101 1 8 900 252 176 250 0 chr13 41390280 41390348 -78893964 - L1MA4 LINE L1 -497 5794 5710 8 900 570 280 47 91 chr13 41390584 41390902 -78893410 + L1MA9 LINE L1 6004 6307 -5 8 900 913 289 89 72 chr13 41390928 41391707 -78892605 + RMER13A LTR ERVK 22 813 -95 8 900 357 183 31 31 chr13 41391707 41391803 -78892509 + L1MA9 LINE L1 6212 6307 -5 8 900 198 0 0 0 chr13 41391808 41391830 -78892482 + (A)n Simple_repeat Simple_repeat 1 22 0 8 900 335 307 59 8 chr13 41392228 41392390 -78891922 - B4 SINE B4 -11 281 79 8 900 182 276 150 33 chr13 41392478 41392598 -78891714 + L4 LINE RTE 1398 1531 -498 8 900 324 301 133 9 chr13 41393488 41393706 -78890606 + L1MA7 LINE L1 5988 6232 -59 8 900 27 29 0 0 chr13 41393857 41393891 -78890421 + AT_rich Low_complexity Low_complexity 1 34 0 8 900 248 349 0 0 chr13 41394084 41394167 -78890145 + ID4_ SINE ID 1 83 0 8 900 226 355 64 26 chr13 41394384 41394618 -78889694 - L1MC4 LINE L1 -232 7810 7568 8 900 1067 168 119 0 chr13 41395103 41395305 -78889007 - URR1A DNA MER1_type 0 226 1 8 900 262 246 0 14 chr13 41395996 41396066 -78888246 + ID4_ SINE ID 12 80 -3 8 900 369 0 0 0 chr13 41396494 41396535 -78887777 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 900 333 339 91 0 chr13 41397563 41397684 -78886628 + B3A SINE B2 65 196 -2 8 900 405 0 0 0 chr13 41397733 41397778 -78886534 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 900 268 24 24 24 chr13 41397919 41397961 -78886351 + (TA)n Simple_repeat Simple_repeat 2 43 0 8 900 582 15 0 0 chr13 41397961 41398027 -78886285 + (TG)n Simple_repeat Simple_repeat 2 68 0 8 900 378 222 0 0 chr13 41399322 41399412 -78884900 + (TA)n Simple_repeat Simple_repeat 1 90 0 8 900 225 272 181 45 chr13 41399495 41399672 -78884640 - RMER21B LTR ERV1 -275 567 367 8 900 430 133 170 9 chr13 41399985 41400091 -78884221 - Lx9 LINE L1 0 7644 7522 8 900 338 149 173 8 chr13 41400176 41400283 -78884029 - L1M5 LINE L1 -2177 5818 5712 8 900 526 286 9 0 chr13 41400368 41400480 -78883832 - RSINE1 SINE B4 -51 114 2 8 900 22 0 0 0 chr13 41400490 41400512 -78883800 + AT_rich Low_complexity Low_complexity 1 22 0 8 900 888 67 0 0 chr13 41400512 41400632 -78883680 + (GAGAA)n Simple_repeat Simple_repeat 4 123 0 8 900 189 0 0 0 chr13 41400632 41400653 -78883659 + (CAAAG)n Simple_repeat Simple_repeat 1 21 0 8 900 980 206 5 19 chr13 41400653 41400866 -78883446 + B3 SINE B2 6 215 -1 8 900 381 314 7 8 chr13 41400994 41401184 -78883128 - L1M5 LINE L1 -3535 2611 2423 8 900 890 215 31 22 chr13 41401435 41401659 -78882653 - RMER1C Other Other -65 1277 1052 8 900 1671 214 41 23 chr13 41402079 41402110 -78882202 - MTD LTR MaLR 0 419 394 8 900 360 0 0 0 chr13 41402110 41402150 -78882162 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 900 1671 214 41 23 chr13 41402150 41402505 -78881807 - MTD LTR MaLR -26 393 26 8 900 250 341 86 4 chr13 41402611 41402844 -78881468 - L1M5 LINE L1 -715 5729 5478 8 900 521 290 12 41 chr13 41403072 41403241 -78881071 - RSINE1 SINE B4 0 165 2 8 900 727 112 0 16 chr13 41403241 41403368 -78880944 + (CCAA)n Simple_repeat Simple_repeat 2 126 0 8 900 324 210 16 0 chr13 41403568 41403630 -78880682 - Lx8 LINE L1 -360 7113 7051 8 900 1080 218 0 31 chr13 41403684 41403907 -78880405 - B3 SINE B2 0 216 1 8 900 472 280 95 101 chr13 41404236 41404582 -78879730 + ORR1E LTR MaLR 1 344 -15 8 900 851 79 157 7 chr13 41404587 41404727 -78879585 - B2_Mm2 SINE B2 -31 164 4 8 900 504 232 85 31 chr13 41404979 41405108 -78879204 + B1_Mur1 SINE Alu 1 136 -13 8 900 180 0 0 0 chr13 41405125 41405145 -78879167 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 8 900 21 0 0 0 chr13 41406267 41406288 -78878024 + AT_rich Low_complexity Low_complexity 1 21 0 8 900 23 0 0 0 chr13 41407915 41407938 -78876374 + AT_rich Low_complexity Low_complexity 1 23 0 8 900 429 338 43 0 chr13 41408150 41408289 -78876023 - RSINE1 SINE B4 -18 147 3 8 900 356 346 9 0 chr13 41409116 41409223 -78875089 + PB1D10 SINE Alu 1 108 -9 8 900 258 160 0 0 chr13 41410628 41410678 -78873634 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 900 255 237 0 33 chr13 41413059 41413120 -78871192 + CT-rich Low_complexity Low_complexity 3 61 0 8 900 203 309 0 41 chr13 41414011 41414109 -78870203 + GA-rich Low_complexity Low_complexity 2 95 0 8 900 1244 41 0 0 chr13 41414277 41414424 -78869888 - B1_Mm SINE Alu 0 147 1 8 900 616 278 75 0 chr13 41414425 41414550 -78869762 + B3 SINE B2 31 155 -61 8 900 354 45 0 0 chr13 41414550 41414594 -78869718 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 900 616 278 75 0 chr13 41414594 41414641 -78869671 + B3 SINE B2 156 215 -1 8 900 297 0 0 0 chr13 41414693 41414726 -78869586 + (T)n Simple_repeat Simple_repeat 1 33 0 8 900 513 0 0 0 chr13 41415484 41415541 -78868771 + (TCCC)n Simple_repeat Simple_repeat 3 59 0 8 900 694 280 64 40 chr13 41415576 41415825 -78868487 - B4A SINE B4 -19 273 19 8 900 186 43 0 0 chr13 41417451 41417474 -78866838 + (T)n Simple_repeat Simple_repeat 1 23 0 8 900 270 272 12 0 chr13 41417850 41417931 -78866381 + (TG)n Simple_repeat Simple_repeat 1 82 0 8 900 426 198 31 6 chr13 41417946 41418109 -78866203 + (TG)n Simple_repeat Simple_repeat 1 167 0 8 900 21 0 0 0 chr13 41418155 41418176 -78866136 + AT_rich Low_complexity Low_complexity 1 21 0 8 900 548 216 18 18 chr13 41418226 41418339 -78865973 + PB1D10 SINE Alu 3 115 -2 8 900 585 289 48 0 chr13 41418546 41418712 -78865600 - B3 SINE B2 -40 176 3 8 112 1067 83 12 12 chr13 41418715 41418886 -78865426 + (TTC)n Simple_repeat Simple_repeat 3 173 0 8 901 215 125 0 0 chr13 41418921 41418953 -78865359 - B2_Mm2 SINE B2 -94 101 70 8 901 1298 90 11 0 chr13 41418960 41419137 -78865175 - B2_Mm1t SINE B2 -14 179 1 8 901 562 291 16 0 chr13 41419139 41419266 -78865046 - B4A SINE B4 -64 228 100 8 901 243 152 0 0 chr13 41419268 41419314 -78864998 + (CATA)n Simple_repeat Simple_repeat 4 49 0 8 901 359 279 12 0 chr13 41419314 41419400 -78864912 - B4A SINE B4 -195 97 11 8 901 567 333 49 42 chr13 41419705 41419993 -78864319 + MER2 DNA MER2_type 1 290 -55 8 901 912 249 125 21 chr13 41421825 41422162 -78862150 + L1MA5 LINE L1 5927 6298 -2 8 901 198 103 0 0 chr13 41422203 41422232 -78862080 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 901 419 242 8 39 chr13 41422389 41422518 -78861794 + BC1_Mm scRNA scRNA 2 126 -26 8 901 670 262 20 20 chr13 41422715 41422867 -78861445 + RSINE1 SINE B4 3 154 -11 8 901 432 0 0 0 chr13 41422868 41422916 -78861396 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 901 387 0 0 0 chr13 41422916 41422958 -78861354 + (GA)n Simple_repeat Simple_repeat 2 44 0 8 901 230 329 0 0 chr13 41426031 41426101 -78858211 - RMER30 DNA MER1_type 0 202 133 8 901 230 288 30 0 chr13 41427836 41427902 -78856410 - PB1D10 SINE Alu -49 68 1 8 901 337 345 124 0 chr13 41427902 41427962 -78856350 - ID SINE ID -143 81 8 8 901 513 236 32 8 chr13 41428391 41428515 -78855797 + RSINE1 SINE B4 1 127 -38 8 901 288 0 0 0 chr13 41428529 41428561 -78855751 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 901 27 87 0 0 chr13 41428564 41428633 -78855679 + AT_rich Low_complexity Low_complexity 1 69 0 9 901 252 98 137 0 chr13 41428634 41428685 -78855627 + Lx5 LINE L1 6991 7048 -2 9 901 769 303 120 41 chr13 41428778 41429243 -78855069 - ORSL-2b DNA Tip100 -5 503 2 9 901 451 223 113 23 chr13 41429448 41429581 -78854731 + ID_B1 SINE B4 80 224 0 9 901 1117 130 50 11 chr13 41430642 41430821 -78853491 - B2_Mm2 SINE B2 -9 186 1 9 901 224 215 30 30 chr13 41430925 41431093 -78853219 + GA-rich Low_complexity Low_complexity 2 169 0 9 901 830 184 157 0 chr13 41432153 41432338 -78851974 + B3 SINE B2 2 215 -1 9 901 351 0 0 0 chr13 41432673 41432712 -78851600 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 901 538 218 0 18 chr13 41433662 41433774 -78850538 + PB1D10 SINE Alu 6 115 -2 9 901 23 68 0 0 chr13 41435894 41435938 -78848374 + AT_rich Low_complexity Low_complexity 1 44 0 9 901 288 0 0 0 chr13 41436178 41436210 -78848102 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 901 364 237 118 0 chr13 41436210 41436303 -78848009 - PB1 SINE Alu -22 105 2 9 901 1179 205 0 14 chr13 41437995 41438213 -78846099 + B3 SINE B2 2 216 0 9 901 187 366 73 60 chr13 41438726 41438844 -78845468 - MIR3 SINE MIR -23 185 70 9 901 248 0 31 0 chr13 41438844 41438876 -78845436 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 9 901 187 366 73 60 chr13 41438876 41438908 -78845404 - MIR3 SINE MIR -139 69 33 9 901 552 266 6 61 chr13 41440258 41440422 -78843890 - RSINE1 SINE B4 0 165 11 9 901 231 114 0 0 chr13 41441451 41441486 -78842826 + (CACG)n Simple_repeat Simple_repeat 1 35 0 9 901 405 316 26 13 chr13 41442709 41442860 -78841452 + RSINE1 SINE B4 2 154 -11 9 901 1211 237 27 31 chr13 41443983 41444275 -78840037 + B4 SINE B4 1 291 -1 9 901 305 111 0 0 chr13 41445807 41445852 -78838460 - HAL1-3A_ME LINE L1 -839 2019 1975 9 901 503 170 0 10 chr13 41445852 41445953 -78838359 + (TA)n Simple_repeat Simple_repeat 1 100 0 9 901 337 314 87 6 chr13 41447291 41447464 -78836848 - B4A SINE B4 -6 286 100 9 901 762 288 17 50 chr13 41448366 41448666 -78835646 - B4A SINE B4 0 292 3 9 901 273 89 0 0 chr13 41448840 41448885 -78835427 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 9 901 405 0 0 0 chr13 41448889 41448934 -78835378 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 9 901 319 310 84 0 chr13 41449482 41449637 -78834675 - MIRb SINE MIR -8 260 93 9 901 625 178 0 17 chr13 41451358 41451478 -78832834 - PB1D9 SINE Alu -2 118 1 9 901 218 156 0 22 chr13 41451800 41451846 -78832466 + A-rich Low_complexity Low_complexity 2 46 0 9 901 269 109 22 0 chr13 41452568 41452614 -78831698 + (ATG)n Simple_repeat Simple_repeat 2 48 0 9 901 36 0 0 0 chr13 41453385 41453421 -78830891 + AT_rich Low_complexity Low_complexity 1 36 0 9 901 240 35 0 0 chr13 41455249 41455278 -78829034 + (A)n Simple_repeat Simple_repeat 1 29 0 9 901 261 0 0 0 chr13 41455621 41455650 -78828662 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 9 901 317 312 55 30 chr13 41457598 41457763 -78826549 + MER58B DNA MER1_type 26 194 -147 9 901 743 189 3 3 chr13 41458683 41458988 -78825324 + (CA)n Simple_repeat Simple_repeat 1 305 0 9 901 27 0 0 0 chr13 41460484 41460511 -78823801 + AT_rich Low_complexity Low_complexity 1 27 0 9 901 4733 44 0 0 chr13 41460523 41461087 -78823225 - L1Md_F2 LINE L1 -12 6570 6007 9 901 548 275 56 81 chr13 41461230 41461428 -78822884 - B3A SINE B2 -5 193 1 9 901 347 105 18 0 chr13 41461454 41461511 -78822801 + (TCTCCC)n Simple_repeat Simple_repeat 3 60 0 9 901 1008 92 0 66 chr13 41461513 41461665 -78822647 - B1_Mus1 SINE Alu -5 143 2 9 901 394 222 10 29 chr13 41461667 41461769 -78822543 - B4A SINE B4 -79 213 114 9 901 1270 39 9 0 chr13 41462252 41462480 -78821832 + (CACAG)n Simple_repeat Simple_repeat 1 229 0 9 901 901 258 58 70 chr13 41463030 41463372 -78820940 - MER2 DNA MER2_type -6 339 2 9 901 940 271 22 60 chr13 41464477 41464795 -78819517 + MLT2D LTR ERVL 6 311 -103 9 901 194 119 0 45 chr13 41464835 41464879 -78819433 + (TCTCTG)n Simple_repeat Simple_repeat 5 46 0 9 901 925 158 6 0 chr13 41464934 41465099 -78819213 + URR1A DNA MER1_type 60 225 -1 9 901 239 350 38 28 chr13 41465605 41465711 -78818601 + MLT1K LTR MaLR 162 268 -327 9 901 1966 177 86 3 chr13 41465940 41466325 -78817987 + MTD LTR MaLR 3 419 0 9 901 327 253 40 0 chr13 41467736 41467811 -78816501 - ID4_ SINE ID -3 80 3 9 901 381 123 0 0 chr13 41467831 41467896 -78816416 + (CA)n Simple_repeat Simple_repeat 2 66 0 9 901 205 227 45 0 chr13 41467936 41468046 -78816266 + (TA)n Simple_repeat Simple_repeat 1 115 0 9 901 378 0 0 0 chr13 41468893 41468935 -78815377 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 901 391 301 109 0 chr13 41469327 41469520 -78814792 - L1MB7 LINE L1 -16 6168 5955 9 901 180 0 0 0 chr13 41471886 41471906 -78812406 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 9 901 527 197 17 8 chr13 41472908 41473026 -78811286 - RSINE1 SINE B4 -35 130 12 9 901 303 93 0 0 chr13 41473909 41473952 -78810360 + (TCCCC)n Simple_repeat Simple_repeat 5 47 0 9 901 484 60 0 46 chr13 41474564 41474651 -78809661 + (TCTCTG)n Simple_repeat Simple_repeat 2 84 0 9 901 228 35 0 0 chr13 41474654 41474683 -78809629 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 901 389 267 0 0 chr13 41475916 41476002 -78808310 - B4 SINE B4 -62 230 145 9 901 350 228 10 0 chr13 41476002 41476103 -78808209 + (TA)n Simple_repeat Simple_repeat 2 103 0 9 901 471 275 33 0 chr13 41476103 41476223 -78808089 - B4 SINE B4 -167 125 2 9 901 210 256 0 0 chr13 41477021 41477064 -78807248 + T-rich Low_complexity Low_complexity 1 43 0 9 901 243 0 0 0 chr13 41477972 41477999 -78806313 + (CA)n Simple_repeat Simple_repeat 2 28 0 9 901 195 129 0 0 chr13 41478017 41478048 -78806264 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 901 423 0 0 0 chr13 41478325 41478372 -78805940 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 901 222 381 51 6 chr13 41478578 41478755 -78805557 + MIRb SINE MIR 27 211 -57 9 901 270 136 0 0 chr13 41478947 41478991 -78805321 + (GGA)n Simple_repeat Simple_repeat 3 46 0 9 901 339 276 0 15 chr13 41479115 41479328 -78804984 + (TG)n Simple_repeat Simple_repeat 1 209 0 9 901 302 288 117 34 chr13 41479596 41479797 -78804515 - MIRb SINE MIR -16 252 43 9 901 585 172 33 49 chr13 41479801 41479923 -78804389 - PB1D9 SINE Alu 0 120 1 9 901 198 103 0 0 chr13 41480871 41480900 -78803412 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 9 901 246 105 0 0 chr13 41481188 41481226 -78803086 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 901 21 0 0 0 chr13 41481754 41481775 -78802537 + AT_rich Low_complexity Low_complexity 1 21 0 9 901 189 0 0 0 chr13 41482412 41482433 -78801879 + (CAAG)n Simple_repeat Simple_repeat 4 24 0 9 901 396 0 0 0 chr13 41482606 41482650 -78801662 + (TC)n Simple_repeat Simple_repeat 1 44 0 9 901 6987 75 44 19 chr13 41482901 41484423 -78799889 - L1_Mus2 LINE L1 0 6566 4979 9 901 2942 66 0 0 chr13 41484422 41484802 -78799510 - L1_Mus2 LINE L1 -1517 4366 3987 9 901 243 305 71 63 chr13 41485424 41485550 -78798762 - MIR SINE MIR -90 172 46 9 901 288 0 0 0 chr13 41485742 41485774 -78798538 + (T)n Simple_repeat Simple_repeat 1 32 0 9 901 284 339 35 26 chr13 41485936 41486051 -78798261 + Tigger5 DNA MER2_type 2 117 -2289 9 901 292 268 130 26 chr13 41486129 41486244 -78798068 + B1_Mur4 SINE Alu 24 150 0 9 901 1669 164 75 88 chr13 41486472 41486640 -78797672 + ORR1D1 LTR MaLR 1 179 -195 9 901 213 65 0 0 chr13 41486640 41486671 -78797641 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 9 901 1669 164 75 88 chr13 41486671 41486832 -78797480 + ORR1D1 LTR MaLR 180 340 -34 9 901 1668 36 0 0 chr13 41486832 41487025 -78797287 - B2_Mm1a SINE B2 0 193 1 9 901 1669 164 75 88 chr13 41487025 41487069 -78797243 + ORR1D1 LTR MaLR 341 369 -5 9 901 480 310 0 7 chr13 41487086 41487232 -78797080 + B1F SINE Alu 4 148 -1 9 901 210 289 108 63 chr13 41487267 41487378 -78796934 + PB1D7 SINE Alu 5 120 0 9 901 357 291 9 18 chr13 41488365 41488477 -78795835 - B1F SINE Alu -4 145 35 9 901 11116 157 141 90 chr13 41489445 41489751 -78794561 + Lx4B LINE L1 3001 3304 -2582 9 901 260 0 57 0 chr13 41489751 41489786 -78794526 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 9 901 11392 140 84 52 chr13 41489786 41490007 -78794305 + Lx4B LINE L1 3305 3592 -2294 9 901 1170 102 0 11 chr13 41490007 41490185 -78794127 - B2_Mm2 SINE B2 -19 176 1 9 901 11392 140 84 52 chr13 41490185 41490973 -78793339 + Lx4B LINE L1 3593 4626 -1260 9 901 234 0 0 0 chr13 41490973 41490999 -78793313 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 9 901 11392 128 28 15 chr13 41490999 41492506 -78791806 + Lx4B LINE L1 4620 6145 -913 9 901 1486 135 77 0 chr13 41492531 41492791 -78791521 - ORR1B1 LTR MaLR -114 280 1 9 901 1628 198 62 22 chr13 41493176 41493532 -78790780 - ORR1D1 LTR MaLR -2 372 3 9 901 416 19 19 0 chr13 41493635 41493688 -78790624 + (TCTCCC)n Simple_repeat Simple_repeat 3 56 0 9 901 21 0 0 0 chr13 41493793 41493814 -78790498 + AT_rich Low_complexity Low_complexity 1 21 0 9 901 3679 58 0 0 chr13 41493814 41494264 -78790048 - L1_Mus1 LINE L1 -1 6566 6117 9 901 3546 55 2 0 chr13 41494264 41494700 -78789612 + L1_Mus1 LINE L1 5680 6116 -451 9 901 703 283 120 13 chr13 41495194 41495427 -78788885 + B4A SINE B4 32 289 -3 9 901 270 95 0 0 chr13 41495444 41495486 -78788826 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 901 244 275 98 24 chr13 41498778 41498860 -78785452 - ID_B1 SINE B4 0 224 137 9 901 452 48 16 0 chr13 41498924 41498987 -78785325 + (CA)n Simple_repeat Simple_repeat 2 65 0 9 901 370 227 0 0 chr13 41499007 41499073 -78785239 + B1_Mur1 SINE Alu 77 142 -7 9 901 1414 47 78 0 chr13 41499807 41500000 -78784312 - L1Md_F3 LINE L1 -1 6583 6376 9 901 2342 63 0 0 chr13 41500000 41500286 -78784026 - L1Md_F3 LINE L1 -209 6375 6090 1 901 1453 268 107 54 chr13 41500892 41501669 -78782643 + L1MA8 LINE L1 5445 6262 -29 2 901 2756 47 0 17 chr13 41502450 41502796 -78781516 - L1Md_F2 LINE L1 0 6582 6243 3 901 180 0 0 0 chr13 41504612 41504632 -78779680 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 901 211 283 252 17 chr13 41504691 41504709 -78779603 - B4 SINE B4 -52 240 99 5 901 411 289 0 0 chr13 41504709 41504806 -78779506 - PB1D10 SINE Alu -7 110 14 6 901 326 273 64 1 chr13 41505037 41505142 -78779170 - MIR SINE MIR -54 154 44 7 901 345 341 65 6 chr13 41505358 41505526 -78778786 + MER5B DNA MER1_type 1 178 0 8 901 365 282 24 0 chr13 41505886 41505971 -78778341 - PB1D10 SINE Alu -7 110 24 9 901 181 255 0 0 chr13 41507181 41507228 -78777084 - L2a LINE L2 -16 3410 3364 1 901 199 236 137 60 chr13 41507283 41507400 -78776912 - MIR3 SINE MIR -78 130 5 1 901 504 0 0 0 chr13 41507492 41507548 -78776764 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 901 352 140 0 0 chr13 41507562 41507619 -78776693 - B1_Mus1 SINE Alu -87 61 5 1 901 343 333 145 19 chr13 41507631 41507845 -78776467 + L1ME2 LINE L1 4447 4687 -1459 1 901 240 246 190 24 chr13 41507950 41508172 -78776140 + L1MC LINE L1 4787 5048 -1095 1 901 421 296 164 35 chr13 41508184 41508440 -78775872 + L1MD LINE L1 5076 5364 -782 1 901 918 297 32 39 chr13 41508456 41508740 -78775572 + B4A SINE B4 6 287 -5 1 901 988 257 134 50 chr13 41508772 41509248 -78775064 + L1ME2 LINE L1 5374 5889 -275 1 901 4564 52 27 27 chr13 41509289 41509876 -78774436 + LTRIS_Mus LTR ERV1 1 587 0 1 901 222 37 0 0 chr13 41509905 41509932 -78774380 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 901 306 0 0 0 chr13 41509933 41509967 -78774345 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 901 250 270 35 35 chr13 41510340 41510455 -78773857 - Lx8 LINE L1 -4 7469 7355 2 901 441 0 0 0 chr13 41510461 41510510 -78773802 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 901 714 276 98 36 chr13 41510568 41511028 -78773284 - L1MA5 LINE L1 -6 6294 5826 2 901 352 281 0 37 chr13 41512178 41512285 -78772027 - PB1D10 SINE Alu -14 103 1 2 901 234 0 0 0 chr13 41512834 41512860 -78771452 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2 901 464 259 26 18 chr13 41512885 41512999 -78771313 - PB1D7 SINE Alu -5 115 1 2 901 23 0 0 0 chr13 41513061 41513084 -78771228 + AT_rich Low_complexity Low_complexity 1 23 0 2 901 328 182 15 15 chr13 41513259 41513326 -78770986 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 901 566 191 11 38 chr13 41513329 41513514 -78770798 + (CATA)n Simple_repeat Simple_repeat 1 180 0 2 901 701 170 18 6 chr13 41513485 41513651 -78770661 + (CA)n Simple_repeat Simple_repeat 2 169 0 3 901 471 261 107 8 chr13 41513700 41513831 -78770481 + RSINE1 SINE B4 3 146 -19 3 901 273 217 0 32 chr13 41514829 41514891 -78769421 + MLT1I LTR MaLR 349 408 -3 3 901 598 194 14 155 chr13 41515343 41515371 -78768941 - B2_Mm2 SINE B2 -7 188 165 3 901 405 0 0 0 chr13 41515371 41515416 -78768896 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 901 279 0 0 0 chr13 41515416 41515446 -78768866 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 901 797 267 11 6 chr13 41515446 41515623 -78768689 - B3 SINE B2 -28 188 11 3 901 273 314 47 39 chr13 41516489 41516618 -78767694 + MER5A DNA MER1_type 34 163 -26 3 901 270 0 0 0 chr13 41517132 41517162 -78767150 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 901 867 183 161 0 chr13 41517185 41517371 -78766941 - RLTR42-int LTR ERVK -4183 1339 1124 3 901 227 220 83 176 chr13 41518158 41518351 -78765961 - RMER10A LTR ERVL -16 426 252 4 901 946 55 49 0 chr13 41518374 41518537 -78765775 + (TAGA)n Simple_repeat Simple_repeat 2 172 0 4 901 228 224 0 39 chr13 41519213 41519264 -78765048 - MER63B DNA AcHobo -4 432 384 4 901 186 295 121 35 chr13 41519895 41520011 -78764301 - MIRc SINE MIR -137 131 6 4 901 224 135 71 18 chr13 41520153 41520266 -78764046 + (TG)n Simple_repeat Simple_repeat 1 119 0 4 901 463 137 46 29 chr13 41520285 41520458 -78763854 + (TG)n Simple_repeat Simple_repeat 2 177 0 4 901 267 144 45 9 chr13 41520479 41520591 -78763721 + (TG)n Simple_repeat Simple_repeat 1 116 0 4 901 304 254 0 0 chr13 41520595 41520666 -78763646 - ID4_ SINE ID -11 72 2 4 901 313 250 146 0 chr13 41520666 41520762 -78763550 - B1F1 SINE Alu 0 149 40 4 901 347 0 23 0 chr13 41520878 41520921 -78763391 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 901 270 163 20 0 chr13 41521585 41521634 -78762678 - L2c LINE L2 -58 3329 3280 4 901 27 0 0 0 chr13 41522030 41522057 -78762255 + AT_rich Low_complexity Low_complexity 1 27 0 4 901 186 128 0 0 chr13 41522151 41522190 -78762122 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 901 243 103 0 0 chr13 41522793 41522832 -78761480 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 901 257 167 19 0 chr13 41523794 41523848 -78760464 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 901 318 309 124 93 chr13 41524755 41525133 -78759179 + MLT1A1 LTR MaLR 7 396 -12 5 901 270 277 35 24 chr13 41525195 41525280 -78759032 + L1_Rod LINE L1 5438 5523 -324 5 901 1440 178 48 7 chr13 41525280 41525552 -78758760 - MTD LTR MaLR -12 407 125 5 901 426 39 0 0 chr13 41525716 41525768 -78758544 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 901 917 110 11 34 chr13 41525763 41525941 -78758371 + GA-rich Low_complexity Low_complexity 2 175 0 5 901 26 0 0 0 chr13 41526600 41526626 -78757686 + AT_rich Low_complexity Low_complexity 1 26 0 5 901 24 0 0 0 chr13 41527235 41527259 -78757053 + AT_rich Low_complexity Low_complexity 1 24 0 5 901 347 211 0 27 chr13 41527410 41527483 -78756829 + Tigger7 DNA MER2_type 45 115 -2376 6 901 546 312 51 25 chr13 41527508 41527577 -78756735 + Tigger7 DNA MER2_type 2313 2381 -110 6 901 528 16 0 0 chr13 41527577 41527638 -78756674 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 901 546 312 51 25 chr13 41527638 41527726 -78756586 + Tigger7 DNA MER2_type 2382 2472 -19 6 901 871 228 14 92 chr13 41528711 41528994 -78755318 + ORR1C1 LTR MaLR 93 374 -4 6 901 297 286 0 0 chr13 41529668 41529745 -78754567 + ID4 SINE ID 4 80 -3 6 901 1055 184 6 6 chr13 41529983 41530163 -78754149 + B3 SINE B2 25 204 -12 6 901 239 0 32 0 chr13 41530163 41530194 -78754118 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 901 330 191 32 43 chr13 41530758 41530851 -78753461 + MER53 DNA hAT 2 93 -100 6 901 1079 103 0 0 chr13 41530869 41531015 -78753297 + B1_Mus2 SINE Alu 2 147 0 6 901 1128 73 0 0 chr13 41531307 41531458 -78752854 + (TTCTCC)n Simple_repeat Simple_repeat 3 153 0 6 901 395 198 128 0 chr13 41531458 41531544 -78752768 - PB1D7 SINE Alu -8 112 16 6 901 828 232 88 0 chr13 41533487 41533681 -78750631 + B3 SINE B2 1 211 -5 7 901 244 306 32 74 chr13 41533684 41533789 -78750523 + MIR SINE MIR 44 152 -116 7 901 1176 49 14 0 chr13 41533789 41533933 -78750379 + B1_Mus2 SINE Alu 2 147 0 7 901 244 293 20 95 chr13 41533933 41534000 -78750312 + MIR SINE MIR 151 205 -57 7 901 360 0 0 0 chr13 41534106 41534146 -78750166 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 901 928 133 78 54 chr13 41534146 41534313 -78749999 + ORR1C2 LTR MaLR 6 176 -208 7 901 284 180 247 48 chr13 41534319 41534465 -78749847 + RLTR15 LTR ERVK 73 247 -112 7 901 312 91 0 0 chr13 41534468 41534512 -78749800 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 901 380 215 46 8 chr13 41534514 41534644 -78749668 + ORR1C2 LTR MaLR 174 342 -42 7 901 1278 250 51 19 chr13 41534850 41535164 -78749148 - MTD LTR MaLR -2 417 94 7 901 699 211 174 51 chr13 41535168 41535462 -78748850 - RLTR15 LTR ERVK -29 330 1 7 901 291 222 111 0 chr13 41535462 41535526 -78748786 - MTD LTR MaLR -329 92 21 7 901 234 0 0 0 chr13 41535527 41535553 -78748759 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 7 901 406 241 276 0 chr13 41536761 41536877 -78747435 + B3 SINE B2 1 148 -68 8 901 532 81 23 0 chr13 41537033 41537120 -78747192 + (CA)n Simple_repeat Simple_repeat 1 89 0 8 901 750 320 123 87 chr13 41537151 41537568 -78746744 + MER45B DNA Tip100 113 570 -470 8 901 459 0 0 0 chr13 41537568 41537619 -78746693 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 901 750 320 123 87 chr13 41537619 41537972 -78746340 + MER45B DNA Tip100 571 910 -130 8 901 522 256 0 41 chr13 41538416 41538538 -78745774 + PB1 SINE Alu 3 119 -8 8 901 289 268 13 53 chr13 41538555 41538630 -78745682 + ID4 SINE ID 2 73 -10 8 901 605 139 23 23 chr13 41538651 41538828 -78745484 + (CAGA)n Simple_repeat Simple_repeat 2 178 0 8 901 234 0 0 0 chr13 41538828 41538854 -78745458 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 901 1630 179 152 0 chr13 41539357 41539686 -78744626 + RLTR30 LTR ERV1 1 379 0 8 901 359 356 19 51 chr13 41539852 41540068 -78744244 - MIRb SINE MIR -34 234 26 8 901 241 342 74 8 chr13 41541085 41541206 -78743106 - MER94 DNA AcHobo -1 133 5 9 901 494 350 20 0 chr13 41543878 41544078 -78740234 + MER3 DNA MER1_type 3 206 -3 9 901 460 157 45 0 chr13 41544389 41544478 -78739834 - MTEa LTR MaLR -23 356 264 9 901 747 287 22 6 chr13 41544503 41544685 -78739627 - MTEa LTR MaLR -194 185 1 9 901 627 142 0 0 chr13 41546851 41546932 -78737380 + (TC)n Simple_repeat Simple_repeat 1 81 0 9 901 351 0 0 0 chr13 41546932 41546971 -78737341 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 901 627 142 0 0 chr13 41546971 41547016 -78737296 + (TC)n Simple_repeat Simple_repeat 2 46 0 9 901 224 137 115 19 chr13 41547016 41547068 -78737244 - B1F SINE Alu -14 135 79 9 901 676 266 84 38 chr13 41547557 41547718 -78736594 + MER2 DNA MER2_type 3 171 -174 9 901 3283 46 10 3 chr13 41547718 41548109 -78736203 - MTA_Mm LTR MaLR 0 396 3 9 901 676 266 84 38 chr13 41548109 41548209 -78736103 + MER2 DNA MER2_type 172 276 -69 9 901 473 322 0 32 chr13 41548459 41548613 -78735699 + ID_B1 SINE B4 74 222 -2 9 901 192 331 86 7 chr13 41549643 41549783 -78734529 + L2a LINE L2 2937 3087 -339 1 902 396 319 159 0 chr13 41549966 41550104 -78734208 + RSINE1 SINE B4 1 160 -5 1 902 1735 249 69 12 chr13 41550343 41550765 -78733547 + Lx8 LINE L1 6272 6717 -756 1 902 326 23 23 0 chr13 41550771 41550814 -78733498 + (CATA)n Simple_repeat Simple_repeat 2 45 0 1 902 207 0 0 0 chr13 41550977 41551000 -78733312 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 902 384 255 148 43 chr13 41551000 41551115 -78733197 - B1F1 SINE Alu -10 139 13 1 902 192 77 0 0 chr13 41551130 41551156 -78733156 + (T)n Simple_repeat Simple_repeat 1 26 0 1 902 257 186 67 17 chr13 41551196 41551256 -78733056 - B1F SINE Alu -86 63 1 1 902 244 319 132 0 chr13 41551257 41551348 -78732964 + L2a LINE L2 3305 3407 -19 1 902 791 259 125 19 chr13 41552461 41552725 -78731587 + B4 SINE B4 1 292 0 1 902 342 0 0 0 chr13 41552741 41552779 -78731533 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 902 315 0 0 0 chr13 41553446 41553481 -78730831 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 902 1305 79 11 11 chr13 41553535 41553714 -78730598 + RMER19A LTR ERVK 1 179 -558 1 902 210 240 64 39 chr13 41553766 41553844 -78730468 + L2b LINE L2 2933 3012 -363 1 902 231 288 106 53 chr13 41555682 41555911 -78728401 - L2b LINE L2 -19 3407 3129 1 902 377 236 9 9 chr13 41555922 41556029 -78728283 - L1MA9 LINE L1 -4 6308 6202 1 902 503 319 152 28 chr13 41556141 41556464 -78727848 + MLT1C LTR MaLR 35 397 -70 1 902 233 227 87 43 chr13 41557746 41557838 -78726474 - PB1D10 SINE Alu -11 106 11 1 902 748 310 66 49 chr13 41558435 41558903 -78725409 - Lx9 LINE L1 -151 7493 7018 1 902 2467 56 75 0 chr13 41559022 41559344 -78724968 - ORR1A1 LTR MaLR 0 346 1 1 902 2519 50 31 3 chr13 41559543 41559861 -78724451 + ORR1A2 LTR MaLR 1 327 0 1 902 619 231 27 27 chr13 41559969 41560116 -78724196 + RSINE1 SINE B4 9 155 -10 1 902 708 12 0 0 chr13 41560118 41560199 -78724113 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 1 902 228 328 16 0 chr13 41561450 41561511 -78722801 + ID4_ SINE ID 3 64 -19 1 902 459 221 80 0 chr13 41561513 41561626 -78722686 - L1MA6 LINE L1 -23 6277 6156 1 902 341 322 17 34 chr13 41562802 41562921 -78721391 - PB1D10 SINE Alu 0 117 1 1 902 383 340 88 81 chr13 41563203 41563475 -78720837 + B4 SINE B4 2 275 -17 1 902 1122 66 0 0 chr13 41564291 41564443 -78719869 + (TG)n Simple_repeat Simple_repeat 1 152 0 1 902 1332 88 11 6 chr13 41564596 41564779 -78719533 + B2_Mm1t SINE B2 2 185 -8 1 902 1001 58 7 0 chr13 41565792 41565929 -78718383 + (TC)n Simple_repeat Simple_repeat 2 139 0 1 902 303 177 0 0 chr13 41565929 41565991 -78718321 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 902 435 332 62 58 chr13 41566146 41566405 -78717907 + MLT1A0 LTR MaLR 26 285 -80 1 902 1512 171 170 3 chr13 41566687 41567016 -78717296 - ORR1C2 LTR MaLR 0 384 1 1 902 894 219 127 88 chr13 41567527 41567896 -78716416 + MT2A LTR ERVL 1 461 -72 1 902 297 0 0 0 chr13 41567896 41567929 -78716383 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 902 529 208 65 54 chr13 41567929 41568008 -78716304 + MT2A LTR ERVL 462 532 -1 1 902 1055 222 192 20 chr13 41568332 41568686 -78715626 + MTD LTR MaLR 5 419 0 1 902 1162 294 126 4 chr13 41569090 41569565 -78714747 + MER68 LTR ERVL 13 545 -18 1 902 33 66 0 0 chr13 41571168 41571229 -78713083 + AT_rich Low_complexity Low_complexity 1 61 0 1 902 436 263 82 8 chr13 41571249 41571383 -78712929 - B1F SINE Alu 0 149 6 1 902 573 325 0 19 chr13 41572710 41572870 -78711442 + RSINE1 SINE B4 3 159 -6 1 902 292 105 53 0 chr13 41573248 41573305 -78711007 + C-rich Low_complexity Low_complexity 2 61 0 1 902 504 279 49 0 chr13 41573337 41573459 -78710853 - B1F2 SINE Alu -21 128 1 1 902 301 361 57 91 chr13 41573459 41573556 -78710756 - B4 SINE B4 -200 92 3 1 902 1469 212 74 30 chr13 41574090 41574261 -78710051 + ORR1C2 LTR MaLR 2 187 -197 1 902 279 0 0 0 chr13 41574261 41574292 -78710020 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 902 1469 212 74 30 chr13 41574292 41574485 -78709827 + ORR1C2 LTR MaLR 188 382 -2 1 902 791 249 44 0 chr13 41574786 41574991 -78709321 + B3 SINE B2 3 216 0 1 902 21 0 0 0 chr13 41575662 41575683 -78708629 + GC_rich Low_complexity Low_complexity 1 21 0 1 902 1502 214 110 21 chr13 41576070 41576443 -78707869 - MTD LTR MaLR 0 419 14 1 902 851 296 103 19 chr13 41576569 41577026 -78707286 - L1MC1 LINE L1 -1 6343 5845 1 902 658 286 75 56 chr13 41577631 41577950 -78706362 + MTEb LTR MaLR 54 378 -1 1 902 390 42 0 0 chr13 41578401 41578449 -78705863 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 902 216 0 0 0 chr13 41578569 41578593 -78705719 + (GA)n Simple_repeat Simple_repeat 1 24 0 1 902 239 293 49 0 chr13 41578997 41579079 -78705233 + L2a LINE L2 3320 3405 -21 1 902 608 313 31 5 chr13 41579192 41579388 -78704924 + Tigger5 DNA MER2_type 2 202 -2204 1 902 282 138 0 0 chr13 41579945 41580003 -78704309 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 902 1303 131 60 14 chr13 41580944 41581160 -78703152 - URR1A DNA MER1_type 0 226 1 1 902 355 165 0 23 chr13 41582802 41582889 -78701423 + CT-rich Low_complexity Low_complexity 2 86 0 1 902 240 274 76 61 chr13 41583768 41583900 -78700412 - RMER15 LTR ERVL -93 482 349 1 902 901 241 108 35 chr13 41584605 41584863 -78699449 + B4A SINE B4 8 284 -8 1 902 321 89 0 0 chr13 41584880 41584925 -78699387 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 902 202 146 24 0 chr13 41585123 41585164 -78699148 + T-rich Low_complexity Low_complexity 4 45 0 1 902 251 299 0 0 chr13 41586014 41586091 -78698221 + MLT1A LTR MaLR 82 158 -216 1 902 22 0 0 0 chr13 41586838 41586860 -78697452 + AT_rich Low_complexity Low_complexity 1 22 0 1 902 2025 141 56 23 chr13 41588158 41588551 -78695761 - RMER17C LTR ERVK -4 406 1 1 902 301 358 99 8 chr13 41589124 41589366 -78694946 + MLT1A0 LTR MaLR 12 275 -90 1 902 860 265 148 8 chr13 41590746 41591130 -78693182 + L1MA8 LINE L1 5619 6056 -235 1 902 251 311 75 0 chr13 41591138 41591244 -78693068 + L1MA8 LINE L1 6165 6278 -13 1 902 808 292 135 60 chr13 41591690 41592156 -78692156 - MLT1D LTR MaLR -4 501 1 1 902 1180 55 7 0 chr13 41592579 41592725 -78691587 + B1_Mus2 SINE Alu 1 147 0 1 902 195 42 0 0 chr13 41592725 41592749 -78691563 + (A)n Simple_repeat Simple_repeat 1 24 0 1 902 494 254 6 51 chr13 41592760 41592938 -78691374 + L1M2 LINE L1 2346 2515 -3628 1 902 251 246 0 0 chr13 41592928 41592985 -78691327 + Lx8 LINE L1 7413 7469 -4 1 902 389 294 48 48 chr13 41592957 41593146 -78691166 + L1M2 LINE L1 2448 2636 -3507 1 902 651 26 0 0 chr13 41593990 41594067 -78690245 + (GA)n Simple_repeat Simple_repeat 1 77 0 1 902 307 187 12 96 chr13 41594107 41594190 -78690122 - ID4 SINE ID -6 77 2 1 902 23 33 0 0 chr13 41594754 41594784 -78689528 + AT_rich Low_complexity Low_complexity 1 30 0 1 902 437 340 0 77 chr13 41594784 41594953 -78689359 - RSINE1 SINE B4 -2 163 8 1 902 306 125 0 0 chr13 41595843 41595891 -78688421 + (TCC)n Simple_repeat Simple_repeat 2 49 0 1 902 1283 267 99 11 chr13 41597048 41597503 -78686809 + Lx9 LINE L1 7110 7604 -40 1 902 456 257 0 34 chr13 41597529 41597646 -78686666 + PB1D7 SINE Alu 6 118 -2 1 902 285 328 175 32 chr13 41597906 41598186 -78686126 - L2 LINE L2 -1681 1738 1419 1 902 252 122 0 0 chr13 41599745 41599786 -78684526 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 1 902 1692 244 208 11 chr13 41599788 41600347 -78683965 - Lx8 LINE L1 -351 7122 6454 1 902 613 276 58 37 chr13 41601963 41602151 -78682161 + B3A SINE B2 3 194 -4 1 902 441 258 30 59 chr13 41602900 41603069 -78681243 + RSINE1 SINE B4 2 165 0 1 902 207 0 0 0 chr13 41603091 41603114 -78681198 + (CG)n Simple_repeat Simple_repeat 2 24 0 1 902 279 0 0 0 chr13 41603114 41603144 -78681168 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 902 462 36 0 0 chr13 41603144 41603200 -78681112 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 902 2419 80 12 0 chr13 41603312 41603637 -78680675 - Lx LINE L1 -3 6651 6323 1 902 257 94 38 0 chr13 41604197 41604250 -78680062 + (TTTTTG)n Simple_repeat Simple_repeat 1 55 0 1 902 711 269 130 21 chr13 41604414 41604599 -78679713 - L1MA4 LINE L1 -297 6003 5797 1 902 597 49 0 0 chr13 41604599 41604680 -78679632 + (TCTCTG)n Simple_repeat Simple_repeat 2 82 0 1 902 243 0 0 0 chr13 41604681 41604708 -78679604 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 902 711 288 103 22 chr13 41604708 41604914 -78679398 - L1MA4 LINE L1 -504 5796 5539 1 902 504 117 0 0 chr13 41604948 41605025 -78679287 + (TC)n Simple_repeat Simple_repeat 2 78 0 1 902 240 246 180 0 chr13 41605036 41605097 -78679215 - ID4_ SINE ID -11 72 1 1 902 286 267 59 30 chr13 41605106 41605241 -78679071 - B1F1 SINE Alu -8 141 3 1 902 227 250 0 0 chr13 41606214 41606266 -78678046 + G-rich Low_complexity Low_complexity 1 52 0 1 902 263 26 51 0 chr13 41607502 41607541 -78676771 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 902 378 322 33 33 chr13 41607771 41607922 -78676390 - RSINE1 SINE B4 -13 152 2 1 902 482 274 12 50 chr13 41608167 41608328 -78675984 - RSINE1 SINE B4 0 165 11 1 902 443 284 95 17 chr13 41608747 41608926 -78675386 - L1M4 LINE L1 -2451 3695 3503 1 902 770 292 104 15 chr13 41609332 41609669 -78674643 + L1M3e LINE L1 16 382 -6648 1 902 480 18 0 0 chr13 41611607 41611664 -78672648 + (TTTA)n Simple_repeat Simple_repeat 4 60 0 1 902 1415 90 5 0 chr13 41613197 41613385 -78670927 + B2_Mm1a SINE B2 4 192 -1 2 902 211 176 0 0 chr13 41613452 41613486 -78670826 + (TGG)n Simple_repeat Simple_repeat 2 35 0 2 902 1035 254 102 72 chr13 41613760 41614121 -78670191 + MTE2b LTR MaLR 6 377 -2 2 902 456 302 89 59 chr13 41614444 41614715 -78669597 - LTR48B LTR ERV1 0 644 366 2 902 300 53 0 0 chr13 41614967 41615005 -78669307 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 902 1466 175 19 15 chr13 41616469 41616730 -78667582 + Lx7 LINE L1 6637 6898 -798 2 902 611 311 47 34 chr13 41616765 41616998 -78667314 + MLT1A LTR MaLR 132 367 -7 2 902 4608 40 0 2 chr13 41617078 41617622 -78666690 - L1Md_F3 LINE L1 -1 6583 6041 2 902 1167 37 0 0 chr13 41617692 41617827 -78666485 - B1_Mm SINE Alu -12 135 1 2 902 623 139 8 0 chr13 41617973 41618102 -78666210 + (TG)n Simple_repeat Simple_repeat 1 130 0 2 902 908 254 9 23 chr13 41618166 41618384 -78665928 + B3 SINE B2 2 216 0 2 902 523 280 135 27 chr13 41618763 41619048 -78665264 + MLT1C LTR MaLR 106 427 -40 2 902 525 145 14 28 chr13 41620159 41620301 -78664011 + (CAGAGA)n Simple_repeat Simple_repeat 5 144 0 2 902 1121 36 65 0 chr13 41620407 41620545 -78663767 + B1_Mus1 SINE Alu 2 148 0 2 902 420 200 0 0 chr13 41620546 41620661 -78663651 + A-rich Low_complexity Low_complexity 1 115 0 2 902 693 0 0 0 chr13 41622493 41622570 -78661742 + (TTTTC)n Simple_repeat Simple_repeat 1 77 0 2 902 906 169 0 0 chr13 41622570 41622736 -78661576 + CT-rich Low_complexity Low_complexity 3 168 0 2 902 434 65 0 16 chr13 41623151 41623214 -78661098 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 2 902 608 149 37 0 chr13 41623254 41623361 -78660951 - B1_Mur2 SINE Alu -38 111 1 2 902 221 218 152 13 chr13 41623646 41623725 -78660587 - PB1D7 SINE Alu 0 120 31 2 902 489 17 0 0 chr13 41623776 41623834 -78660478 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 902 306 0 0 0 chr13 41623835 41623869 -78660443 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 902 1238 255 70 39 chr13 41623873 41624232 -78660080 - MTEa LTR MaLR -9 370 1 2 902 393 314 42 89 chr13 41624382 41624595 -78659717 - B4A SINE B4 -56 236 34 2 902 495 322 104 51 chr13 41625119 41625671 -78658641 - MLT1G3 LTR MaLR 0 595 3 2 902 613 317 128 10 chr13 41625978 41626290 -78658022 + MER54A LTR ERVL 3 351 -550 2 902 550 313 104 60 chr13 41626608 41626955 -78657357 + MER54A LTR ERVL 348 709 -192 2 902 1225 243 65 87 chr13 41626959 41627328 -78656984 - MTEa LTR MaLR -15 364 4 2 902 367 328 48 0 chr13 41627332 41627457 -78656855 + MER54A LTR ERVL 690 820 -81 2 902 690 243 21 14 chr13 41627694 41627836 -78656476 + B1_Mur1 SINE Alu 1 143 -6 2 902 454 308 83 41 chr13 41628843 41629114 -78655198 - L1MD LINE L1 -1423 4723 4443 2 902 1997 170 27 19 chr13 41629114 41629485 -78654827 - ORR1D1 LTR MaLR 0 374 1 2 902 454 308 83 41 chr13 41629485 41629697 -78654615 - L1MD LINE L1 -1704 4442 4220 2 902 255 274 174 21 chr13 41630312 41630502 -78653810 + Charlie5 DNA MER1_type 2371 2589 -35 2 902 3582 36 0 0 chr13 41630673 41631087 -78653225 + L1Md_F3 LINE L1 5173 5586 -297 2 902 8385 35 11 0 chr13 41631088 41632074 -78652238 + L1Md_F3 LINE L1 5588 6584 0 2 902 1442 75 27 0 chr13 41632656 41632843 -78651469 + B2_Mm2 SINE B2 1 192 -3 2 902 478 340 19 54 chr13 41633110 41633315 -78650997 - B3A SINE B2 0 198 1 2 902 277 314 20 0 chr13 41634378 41634480 -78649832 + LTR16C LTR ERVL 274 377 -112 2 902 1000 289 98 21 chr13 41634623 41634858 -78649454 - Lx8 LINE L1 0 7473 7212 2 902 594 0 0 0 chr13 41634858 41634924 -78649388 + (TC)n Simple_repeat Simple_repeat 1 66 0 2 902 1000 289 98 21 chr13 41634924 41635076 -78649236 - Lx8 LINE L1 -262 7211 7056 2 902 340 353 10 0 chr13 41635718 41635820 -78648492 + PB1D10 SINE Alu 2 104 -13 2 902 860 160 21 0 chr13 41636099 41636243 -78648069 + B1_Mus1 SINE Alu 2 148 0 2 902 1285 246 124 14 chr13 41638077 41638514 -78645798 - L1MB2 LINE L1 -1 6170 5686 2 902 191 36 0 35 chr13 41638554 41638583 -78645729 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2 902 553 106 0 23 chr13 41639112 41639199 -78645113 + RMER19C LTR ERVK 527 611 0 2 902 528 173 85 23 chr13 41639307 41639437 -78644875 - MTEb LTR MaLR -240 139 2 2 902 7621 102 11 18 chr13 41639440 41639924 -78644388 + Lx LINE L1 5498 5963 -691 2 902 433 44 29 0 chr13 41639924 41639992 -78644320 + (TAAA)n Simple_repeat Simple_repeat 2 71 0 2 902 7621 90 12 19 chr13 41639992 41640671 -78643641 + Lx LINE L1 5964 6653 -1 2 902 192 40 0 0 chr13 41640872 41640897 -78643415 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2 902 683 273 125 32 chr13 41641939 41642219 -78642093 - ORR1E LTR MaLR -35 324 19 2 902 647 288 38 8 chr13 41642455 41642693 -78641619 - MER2 DNA MER2_type -7 338 94 2 902 1319 77 0 32 chr13 41643068 41643255 -78641057 - B2_Mm2 SINE B2 -14 181 1 2 902 186 208 0 0 chr13 41643463 41643511 -78640801 + CT-rich Low_complexity Low_complexity 1 48 0 2 902 277 288 62 0 chr13 41644109 41644189 -78640123 - MER5A1 DNA MER1_type -56 110 26 2 902 441 283 0 0 chr13 41644182 41644295 -78640017 + ID_B1 SINE B4 112 224 0 2 902 213 140 17 34 chr13 41644295 41644354 -78639958 + GA-rich Low_complexity Low_complexity 4 61 0 2 902 233 350 10 0 chr13 41645719 41645816 -78638496 + MLT2B3 LTR ERVL 31 128 -426 2 902 311 299 18 36 chr13 41645758 41645869 -78638443 + MTEa LTR MaLR 61 169 -210 2 902 291 339 76 45 chr13 41646081 41646279 -78638033 + MLT2B3 LTR ERVL 304 507 -47 2 902 495 33 0 0 chr13 41646293 41646354 -78637958 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 902 517 266 110 0 chr13 41647111 41647265 -78637047 + B3A SINE B2 1 171 -27 2 902 323 213 68 23 chr13 41647562 41647673 -78636639 + PB1D10 SINE Alu 4 111 -6 2 902 266 175 12 0 chr13 41647676 41647756 -78636556 + GA-rich Low_complexity Low_complexity 2 82 0 2 902 366 159 11 22 chr13 41648136 41648226 -78636086 + CT-rich Low_complexity Low_complexity 2 90 0 2 902 213 211 0 0 chr13 41648355 41648412 -78635900 + A-rich Low_complexity Low_complexity 4 60 0 2 902 961 279 62 31 chr13 41649037 41649359 -78634953 - MTEa LTR MaLR -36 343 12 2 902 195 42 0 0 chr13 41650157 41650181 -78634131 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 902 637 236 7 28 chr13 41650670 41650814 -78633498 - B1F SINE Alu -7 142 2 2 902 234 0 0 0 chr13 41651462 41651488 -78632824 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 902 838 142 0 0 chr13 41651488 41651622 -78632690 - B1_Mur4 SINE Alu -11 139 6 2 902 247 354 112 38 chr13 41652122 41652568 -78631744 - L2 LINE L2 -356 3063 2585 2 902 192 77 0 0 chr13 41652881 41652907 -78631405 + (A)n Simple_repeat Simple_repeat 1 26 0 2 902 334 259 179 7 chr13 41653320 41653460 -78630852 - B4A SINE B4 -1 291 128 2 902 391 102 0 17 chr13 41653663 41653723 -78630589 + URR1B DNA MER1_type 48 106 -119 2 902 550 153 126 8 chr13 41653772 41653891 -78630421 + URR1B DNA MER1_type 93 225 0 2 902 374 346 61 47 chr13 41656211 41656572 -78627740 - MLT1G3 LTR MaLR -227 368 3 2 902 303 71 0 0 chr13 41656733 41656775 -78627537 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 902 3673 24 2 0 chr13 41656999 41657420 -78626892 - L1Md_T LINE L1 -1 6581 6160 2 902 230 319 21 21 chr13 41657880 41657973 -78626339 + MLT1C LTR MaLR 38 130 -337 2 902 288 0 0 0 chr13 41658206 41658238 -78626074 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 902 360 257 0 0 chr13 41658240 41658310 -78626002 - ID4_ SINE ID -9 74 5 2 902 21 0 0 0 chr13 41658310 41658331 -78625981 + AT_rich Low_complexity Low_complexity 1 21 0 2 902 1976 244 100 27 chr13 41658332 41658933 -78625379 - Lx8 LINE L1 0 7473 6829 2 902 380 156 18 18 chr13 41658991 41659102 -78625210 + GA-rich Low_complexity Low_complexity 2 112 0 2 902 507 73 0 0 chr13 41659180 41659248 -78625064 + (GA)n Simple_repeat Simple_repeat 1 68 0 2 902 651 259 28 0 chr13 41661267 41661410 -78622902 + RSINE1 SINE B4 2 148 -17 2 902 493 275 7 37 chr13 41662017 41662153 -78622159 + RSINE1 SINE B4 3 134 -31 2 902 369 43 0 0 chr13 41662182 41662229 -78622083 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 902 412 302 43 0 chr13 41662702 41662818 -78621494 + B1F SINE Alu 18 138 -11 2 902 356 0 0 22 chr13 41662818 41662863 -78621449 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 2 902 3457 149 45 2 chr13 41663059 41663617 -78620695 + RMER4B LTR ERVK 4 585 0 2 902 428 0 0 19 chr13 41664732 41664785 -78619527 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 902 546 276 108 45 chr13 41664800 41665069 -78619243 - B4A SINE B4 -6 286 1 2 902 628 103 41 24 chr13 41665960 41666129 -78618183 + (CA)n Simple_repeat Simple_repeat 1 172 0 2 902 293 214 0 43 chr13 41666322 41666439 -78617873 + GA-rich Low_complexity Low_complexity 2 113 0 2 902 800 122 0 48 chr13 41666450 41666639 -78617673 + GA-rich Low_complexity Low_complexity 1 180 0 2 902 320 296 136 44 chr13 41667970 41668242 -78616070 - MLT1G1 LTR MaLR -275 304 8 2 902 512 306 105 3 chr13 41669435 41669720 -78614592 - L1MD LINE L1 -1794 4352 4039 2 902 219 139 0 0 chr13 41669725 41669761 -78614551 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 2 902 1275 325 80 57 chr13 41669762 41669808 -78614504 - L1M5 LINE L1 -2258 3888 3849 2 902 895 228 113 5 chr13 41669808 41669993 -78614319 - B3 SINE B2 -11 205 1 2 902 1275 325 80 57 chr13 41669993 41670352 -78613960 - L1M5 LINE L1 -2298 3848 3467 2 902 1365 167 18 0 chr13 41670352 41670573 -78613739 - URR1B DNA MER1_type 0 225 1 2 902 1275 325 80 57 chr13 41670573 41670651 -78613661 - L1M5 LINE L1 -2680 3466 3410 2 902 189 0 0 0 chr13 41670651 41670672 -78613640 + (CTAA)n Simple_repeat Simple_repeat 3 23 0 2 902 1275 325 80 57 chr13 41670672 41670691 -78613621 - L1M5 LINE L1 -2737 3409 3395 2 902 797 290 28 0 chr13 41670691 41670905 -78613407 - ID_B1 SINE B4 -4 220 1 2 902 1275 325 80 57 chr13 41670905 41671714 -78612598 - L1M5 LINE L1 -2752 3394 2545 2 902 4114 161 31 51 chr13 41671745 41672640 -78611672 + RLTR25B LTR ERVK 33 1028 0 2 902 1630 224 44 6 chr13 41672650 41673014 -78611298 + MTD LTR MaLR 42 419 0 2 902 468 237 127 6 chr13 41673014 41673171 -78611141 - L1MC LINE L1 -3591 2555 2380 3 902 191 81 54 0 chr13 41673761 41673798 -78610514 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 902 1057 27 7 14 chr13 41673814 41673962 -78610350 - MusHAL1 LINE L1 0 2712 2566 3 902 12791 69 25 15 chr13 41673955 41675740 -78608572 + MusHAL1 LINE L1 790 2592 -120 3 902 406 307 63 128 chr13 41675991 41676342 -78607970 + RLTR12B LTR ERVK 1 328 -200 3 902 470 243 56 9 chr13 41676578 41676686 -78607626 - B4A SINE B4 -179 113 1 3 902 324 0 0 0 chr13 41677049 41677085 -78607227 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 902 21 0 0 0 chr13 41677137 41677158 -78607154 + AT_rich Low_complexity Low_complexity 1 21 0 3 902 477 0 0 0 chr13 41677244 41677297 -78607015 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 902 207 0 0 0 chr13 41677297 41677319 -78606993 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 902 1113 190 71 0 chr13 41677683 41677894 -78606418 - URR1A DNA MER1_type 0 226 1 3 902 27 0 0 0 chr13 41678641 41678668 -78605644 + AT_rich Low_complexity Low_complexity 1 27 0 3 902 449 326 85 96 chr13 41678784 41679311 -78605001 + L1MEb LINE L1 10 547 -5523 3 902 894 250 31 27 chr13 41679311 41679533 -78604779 + ID_B1 SINE B4 2 224 0 3 902 449 326 85 96 chr13 41679533 41679852 -78604460 + L1MEb LINE L1 548 847 -5223 3 902 234 0 0 0 chr13 41680074 41680100 -78604212 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 902 709 155 61 15 chr13 41680105 41680236 -78604076 + B1_Mur4 SINE Alu 5 141 -9 3 902 453 267 43 54 chr13 41680579 41680765 -78603547 + RLTR23 LTR ERV1 247 430 0 3 903 570 15 0 0 chr13 41680987 41681054 -78603258 + (GA)n Simple_repeat Simple_repeat 2 68 0 3 903 1859 137 13 14 chr13 41681369 41681705 -78602607 + ORR1C1 LTR MaLR 8 376 -2 3 903 233 119 24 0 chr13 41681706 41681748 -78602564 + (AGGGGG)n Simple_repeat Simple_repeat 6 48 0 3 903 22 0 0 0 chr13 41681887 41681909 -78602403 + AT_rich Low_complexity Low_complexity 1 22 0 3 903 6493 126 53 17 chr13 41682861 41684012 -78600300 - Lx LINE L1 0 6654 5462 3 903 7884 66 22 12 chr13 41684000 41685671 -78598641 - L1VL2 LINE L1 -1618 1997 316 3 903 3977 59 2 14 chr13 41685805 41686289 -78598023 + L1_Mus1 LINE L1 6090 6567 0 3 903 214 98 0 68 chr13 41686779 41686823 -78597489 + A-rich Low_complexity Low_complexity 2 42 0 3 903 509 211 36 82 chr13 41687060 41687207 -78597105 + B1F SINE Alu 9 149 0 3 903 21 36 0 0 chr13 41687213 41687241 -78597071 + AT_rich Low_complexity Low_complexity 1 28 0 3 903 40 37 0 0 chr13 41687264 41687318 -78596994 + AT_rich Low_complexity Low_complexity 1 54 0 3 903 5198 37 0 13 chr13 41687702 41688338 -78595974 - L1Md_F2 LINE L1 0 6582 5994 3 903 385 256 14 116 chr13 41688483 41688629 -78595683 - B1F1 SINE Alu -9 140 10 3 903 435 225 0 128 chr13 41688721 41688823 -78595489 + B3A SINE B2 2 90 -108 3 903 369 0 0 0 chr13 41688848 41688889 -78595423 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 903 469 335 69 67 chr13 41689410 41689771 -78594541 + L1M5 LINE L1 3687 4048 -2098 3 903 276 141 0 219 chr13 41689914 41689996 -78594316 - RMER15 LTR ERVL 0 575 512 3 903 2796 157 49 23 chr13 41690004 41690531 -78593781 - RMER15 LTR ERVL -29 546 6 3 903 242 262 71 0 chr13 41690538 41690622 -78593690 + L1MC LINE L1 4268 4357 -1789 3 903 1165 81 0 20 chr13 41690707 41690842 -78593470 + B1_Mus1 SINE Alu 1 135 -13 3 903 383 0 0 21 chr13 41690842 41690890 -78593422 + (CAAAA)n Simple_repeat Simple_repeat 1 47 0 3 903 1165 81 0 20 chr13 41690890 41690905 -78593407 + B1_Mus1 SINE Alu 136 148 0 3 903 285 215 63 0 chr13 41690957 41691036 -78593276 + L1M5 LINE L1 4457 4540 -1606 3 903 180 111 0 0 chr13 41692387 41692414 -78591898 + (TCC)n Simple_repeat Simple_repeat 3 29 0 3 903 689 196 35 28 chr13 41692853 41692995 -78591317 - B2_Mm2 SINE B2 -29 166 24 3 903 321 263 48 48 chr13 41692993 41693097 -78591215 - RMER15 LTR ERVL -68 507 404 3 903 514 331 106 22 chr13 41693786 41694098 -78590214 + MLT1C LTR MaLR 8 345 -122 3 903 969 144 7 7 chr13 41695240 41695387 -78588925 + B1_Mus1 SINE Alu 1 147 -1 3 903 285 255 21 11 chr13 41695883 41695978 -78588334 + (TA)n Simple_repeat Simple_repeat 1 96 0 3 903 481 132 198 0 chr13 41695978 41696069 -78588243 + RMER4B LTR ERVK 468 576 -9 3 903 396 0 0 0 chr13 41696071 41696115 -78588197 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 903 1642 270 59 64 chr13 41696176 41696754 -78587558 - MTE-int LTR MaLR -358 1222 648 3 903 1875 234 26 39 chr13 41696826 41697333 -78586979 - MTE-int LTR MaLR -1080 500 1 3 903 487 259 94 110 chr13 41697365 41697556 -78586756 - B3A SINE B2 -5 188 1 3 903 414 267 101 24 chr13 41697762 41697931 -78586381 - MLT1A0 LTR MaLR -64 301 120 3 903 221 0 35 0 chr13 41698443 41698472 -78585840 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 903 420 20 0 0 chr13 41699881 41699930 -78584382 + (GAA)n Simple_repeat Simple_repeat 3 51 0 3 903 216 0 0 0 chr13 41699930 41699954 -78584358 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 903 22 0 0 0 chr13 41701108 41701130 -78583182 + GC_rich Low_complexity Low_complexity 1 22 0 3 903 24 53 0 0 chr13 41701207 41701245 -78583067 + GC_rich Low_complexity Low_complexity 1 38 0 3 903 22 35 0 0 chr13 41701413 41701442 -78582870 + GC_rich Low_complexity Low_complexity 1 29 0 3 903 26 64 0 0 chr13 41701534 41701581 -78582731 + GC_rich Low_complexity Low_complexity 1 47 0 3 903 271 338 83 36 chr13 41703190 41703392 -78580920 + L2c LINE L2 3146 3378 -9 3 903 212 244 0 0 chr13 41704288 41704329 -78579983 + polypyrimidine Low_complexity Low_complexity 4 44 0 3 903 990 278 156 44 chr13 41704331 41704787 -78579525 - MER44B DNA MER2_type -40 510 4 3 903 349 288 62 31 chr13 41705624 41705753 -78578559 - Tigger5 DNA MER2_type 0 2406 2274 3 903 201 361 94 6 chr13 41707351 41707510 -78576802 - MIR SINE MIR -10 252 80 3 903 1286 170 10 10 chr13 41709191 41709399 -78574913 - B3 SINE B2 -6 210 3 3 903 604 190 88 32 chr13 41709498 41709623 -78574689 + B1_Mur1 SINE Alu 18 149 0 3 903 213 39 0 0 chr13 41709624 41709650 -78574662 + (TAA)n Simple_repeat Simple_repeat 1 26 0 3 903 829 186 256 0 chr13 41709718 41709890 -78574422 - B3 SINE B2 0 216 1 3 903 405 236 122 43 chr13 41710352 41710516 -78573796 - L1MCc LINE L1 -5232 1191 1015 3 903 201 121 0 0 chr13 41711683 41711716 -78572596 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 903 229 281 56 11 chr13 41711769 41711859 -78572453 + Lx8 LINE L1 7368 7461 -12 3 903 238 208 0 20 chr13 41712058 41712107 -78572205 + MER5B DNA MER1_type 20 67 -111 3 903 1300 168 9 35 chr13 41712196 41712424 -78571888 - URR1B DNA MER1_type -2 223 2 3 903 1540 205 52 86 chr13 41712448 41712854 -78571458 - RMER10B LTR ERVL -2 396 5 3 903 227 313 29 29 chr13 41712863 41712965 -78571347 - MER58B DNA MER1_type -18 323 222 3 903 198 233 0 0 chr13 41713453 41713513 -78570799 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 903 588 314 56 33 chr13 41713534 41713804 -78570508 - B4A SINE B4 -15 277 2 3 903 906 150 13 26 chr13 41713830 41713981 -78570331 - B1_Mur4 SINE Alu -1 149 1 3 903 551 74 0 12 chr13 41715776 41715858 -78568454 + (TCCC)n Simple_repeat Simple_repeat 4 84 0 3 903 380 230 11 33 chr13 41717196 41717286 -78567026 - L1MD1 LINE L1 -7 6235 6148 3 903 324 0 0 0 chr13 41717438 41717474 -78566838 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 903 459 0 0 0 chr13 41717474 41717524 -78566788 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 903 616 185 62 0 chr13 41717828 41717958 -78566354 - MER21B LTR ERV1 -107 756 619 3 903 700 285 62 22 chr13 41719249 41719522 -78564790 - L1MB2 LINE L1 -242 5929 5646 3 903 1383 269 20 34 chr13 41719534 41719888 -78564424 - ORR1E LTR MaLR -10 349 1 3 903 3705 270 100 37 chr13 41719888 41720471 -78563841 - MTE-int LTR MaLR -53 1527 935 3 903 2040 182 100 82 chr13 41720471 41720993 -78563319 + MT2A LTR ERVL 1 531 -2 3 903 3705 270 100 37 chr13 41720993 41721565 -78562747 - MTE-int LTR MaLR -646 934 298 3 903 585 280 99 16 chr13 41721580 41721903 -78562409 - Lx9 LINE L1 -27 7617 7268 3 903 752 178 234 6 chr13 41721934 41722109 -78562203 - B3 SINE B2 -1 215 1 3 903 432 245 30 10 chr13 41722258 41722373 -78561939 - L1MB2 LINE L1 -536 5643 5526 3 903 547 249 40 34 chr13 41724409 41724584 -78559728 - B3 SINE B2 -2 214 39 3 903 207 237 16 33 chr13 41724873 41724934 -78559378 + GA-rich Low_complexity Low_complexity 2 61 0 3 903 1010 230 0 9 chr13 41725439 41725654 -78558658 - B3 SINE B2 -3 213 1 3 903 410 282 153 0 chr13 41725905 41726107 -78558205 + B4A SINE B4 1 233 -59 3 903 243 103 0 0 chr13 41726205 41726244 -78558068 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 903 700 205 0 43 chr13 41726244 41726382 -78557930 - B1_Mus2 SINE Alu -10 137 6 3 903 315 240 9 57 chr13 41726443 41726549 -78557763 - L1M5 LINE L1 -708 5486 5386 3 903 1232 120 66 0 chr13 41726875 41727058 -78557254 + B2_Mm2 SINE B2 1 195 0 3 903 180 71 0 0 chr13 41727102 41727121 -78557191 + (TA)n Simple_repeat Simple_repeat 1 19 0 3 903 237 65 0 0 chr13 41727121 41727152 -78557160 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 903 180 71 0 0 chr13 41727152 41727160 -78557152 + (TA)n Simple_repeat Simple_repeat 1 8 0 3 903 1709 154 52 110 chr13 41727219 41727619 -78556693 - ORR1B1 LTR MaLR -17 377 1 3 903 329 252 164 7 chr13 41727636 41727776 -78556536 - MER58A DNA MER1_type -18 206 45 3 903 873 241 44 10 chr13 41728827 41729032 -78555280 - B3 SINE B2 -3 213 2 3 903 330 67 0 0 chr13 41729073 41729118 -78555194 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 903 189 107 0 0 chr13 41729184 41729212 -78555100 + (TCTCC)n Simple_repeat Simple_repeat 5 32 0 3 903 226 269 0 0 chr13 41729213 41729265 -78555047 + CT-rich Low_complexity Low_complexity 4 55 0 4 903 21 57 0 0 chr13 41730710 41730745 -78553567 + AT_rich Low_complexity Low_complexity 1 35 0 4 903 261 0 0 0 chr13 41731296 41731325 -78552987 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 903 202 152 17 17 chr13 41732279 41732339 -78551973 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 903 225 0 0 0 chr13 41732741 41732766 -78551546 + (T)n Simple_repeat Simple_repeat 1 25 0 4 903 189 289 123 8 chr13 41733149 41733271 -78551041 + MIRc SINE MIR 26 161 -107 4 903 556 256 26 0 chr13 41734919 41735036 -78549276 - PB1D7 SINE Alu 0 120 1 4 903 313 236 90 0 chr13 41737176 41737265 -78547047 + B4A SINE B4 131 227 -65 4 903 400 253 12 0 chr13 41737272 41737355 -78546957 + RSINE1 SINE B4 9 92 -73 4 903 1237 22 0 0 chr13 41737685 41737824 -78546488 + B1_Mm SINE Alu 1 139 -8 4 903 201 39 0 0 chr13 41740116 41740142 -78544170 + (TG)n Simple_repeat Simple_repeat 2 27 0 4 903 361 290 112 49 chr13 41743379 41743714 -78540598 - MLT1A1 LTR MaLR 0 408 16 4 903 987 189 74 5 chr13 41743977 41744179 -78540133 + B3 SINE B2 1 216 0 4 903 366 80 0 0 chr13 41744247 41744297 -78540015 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 903 597 301 24 59 chr13 41744527 41744816 -78539496 + RMER5 LTR ERV1 54 332 -202 4 903 475 278 72 112 chr13 41745659 41745979 -78538333 + ORR1E LTR MaLR 48 354 -5 4 903 424 259 134 55 chr13 41746048 41746301 -78538011 + B4 SINE B4 1 273 -19 4 903 679 258 60 88 chr13 41746379 41746710 -78537602 + RMER5 LTR ERV1 34 355 -179 4 903 210 71 0 0 chr13 41746713 41746741 -78537571 + (CTTTG)n Simple_repeat Simple_repeat 2 29 0 4 903 377 202 1 129 chr13 41746797 41746931 -78537381 - B4 SINE B4 -170 122 6 4 903 239 282 23 23 chr13 41746939 41747026 -78537286 + L1MC4 LINE L1 7743 7829 -213 4 903 384 119 0 0 chr13 41747045 41747104 -78537208 + (CATA)n Simple_repeat Simple_repeat 2 60 0 4 903 1246 301 97 23 chr13 41747180 41747590 -78536722 - L1MA8 LINE L1 -33 6258 5806 4 903 1182 102 0 0 chr13 41747590 41747766 -78536546 + (TTC)n Simple_repeat Simple_repeat 1 176 0 4 903 1246 301 97 23 chr13 41747766 41748046 -78536266 - L1MA8 LINE L1 -486 5805 5517 4 903 224 288 14 14 chr13 41748106 41748180 -78536132 + CT-rich Low_complexity Low_complexity 5 78 0 4 903 636 59 0 0 chr13 41748223 41748308 -78536004 + ORR1A3 LTR MaLR 241 325 -1 4 903 528 93 0 0 chr13 41748438 41748513 -78535799 + (TC)n Simple_repeat Simple_repeat 1 75 0 4 903 764 251 0 67 chr13 41748521 41748730 -78535582 - Lx9 LINE L1 -462 7182 6988 4 903 649 238 104 54 chr13 41748742 41748982 -78535330 + MER31B LTR ERV1 205 456 -10 4 903 318 300 0 22 chr13 41749124 41749216 -78535096 + GA-rich Low_complexity Low_complexity 3 92 0 4 903 3743 86 128 0 chr13 41749476 41750009 -78534303 - MT2B LTR ERVL 0 601 1 4 903 279 296 68 81 chr13 41750042 41750277 -78534035 + ORR1E LTR MaLR 1 232 -127 4 903 716 162 83 15 chr13 41750735 41750867 -78533445 + B1_Mur4 SINE Alu 1 141 -9 4 903 249 358 0 21 chr13 41751387 41751484 -78532828 + CT-rich Low_complexity Low_complexity 4 98 0 4 903 1898 98 4 4 chr13 41752248 41752526 -78531786 + ORR1A2 LTR MaLR 6 283 -44 4 903 590 304 143 74 chr13 41752567 41753082 -78531230 + MT2A LTR ERVL 20 581 -20 4 903 260 97 105 19 chr13 41753082 41753187 -78531125 + (TCTA)n Simple_repeat Simple_repeat 4 117 0 4 903 900 65 53 12 chr13 41753201 41753372 -78530940 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 4 903 426 85 0 0 chr13 41754739 41754798 -78529514 + (TTCTC)n Simple_repeat Simple_repeat 2 60 0 4 903 245 51 0 25 chr13 41755265 41755305 -78529007 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 4 903 274 233 55 4 chr13 41756779 41756865 -78527447 - MTEb LTR MaLR -209 170 76 4 903 21 0 0 0 chr13 41757336 41757357 -78526955 + AT_rich Low_complexity Low_complexity 1 21 0 4 903 297 0 0 0 chr13 41758130 41758163 -78526149 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 903 529 162 19 38 chr13 41758396 41758719 -78525593 + (TG)n Simple_repeat Simple_repeat 1 316 0 4 903 836 215 45 10 chr13 41758882 41758900 -78525412 + URR1B DNA MER1_type 17 34 -191 4 903 189 94 0 0 chr13 41758900 41758932 -78525380 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 903 836 215 45 10 chr13 41758932 41759115 -78525197 + URR1B DNA MER1_type 35 225 0 4 903 1580 215 52 16 chr13 41759168 41759556 -78524756 - MTD LTR MaLR 0 419 18 4 903 210 71 0 0 chr13 41759558 41759586 -78524726 + (CAT)n Simple_repeat Simple_repeat 2 29 0 4 903 428 333 239 19 chr13 41759775 41760185 -78524127 + MER45B DNA Tip100 1 500 -540 4 903 567 66 0 0 chr13 41760204 41760280 -78524032 + (GA)n Simple_repeat Simple_repeat 2 77 0 4 903 432 226 22 14 chr13 41760280 41760419 -78523893 + MER45B DNA Tip100 751 890 -150 4 903 368 250 9 0 chr13 41760627 41760739 -78523573 + (TATG)n Simple_repeat Simple_repeat 4 116 0 4 903 328 336 173 30 chr13 41760859 41761160 -78523152 - LTR16C LTR ERVL -8 481 138 4 903 258 180 0 0 chr13 41761981 41762042 -78522270 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 903 445 251 0 0 chr13 41762154 41762269 -78522043 - LTR40b LTR ERVL -15 450 336 4 903 438 69 0 0 chr13 41762668 41762726 -78521586 + (TAA)n Simple_repeat Simple_repeat 3 60 0 4 903 405 0 0 0 chr13 41762774 41762819 -78521493 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 903 227 253 109 11 chr13 41763383 41763475 -78520837 + MLT1B LTR MaLR 1 101 -289 4 903 423 0 0 0 chr13 41763550 41763597 -78520715 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 903 333 0 0 0 chr13 41763597 41763633 -78520679 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 903 383 222 39 93 chr13 41763633 41763770 -78520542 - B3A SINE B2 -41 157 26 4 903 1248 238 75 29 chr13 41764542 41764888 -78519424 + ORR1D2 LTR MaLR 9 370 0 4 903 924 183 87 20 chr13 41764983 41765178 -78519134 + B3 SINE B2 9 216 0 4 903 753 256 50 15 chr13 41765199 41765397 -78518915 - B3 SINE B2 -1 215 11 4 903 181 386 50 0 chr13 41765479 41765580 -78518732 + MIR SINE MIR 35 140 -68 4 903 234 359 12 66 chr13 41766601 41766931 -78517381 + MTEb LTR MaLR 55 379 0 4 903 1148 111 0 6 chr13 41767281 41767462 -78516850 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 4 903 432 0 0 0 chr13 41767462 41767510 -78516802 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 4 903 725 284 19 29 chr13 41767570 41767780 -78516532 - ID_B1 SINE B4 -16 208 1 4 903 877 84 0 71 chr13 41767810 41767964 -78516348 + Lx LINE L1 6507 6649 -5 4 903 509 254 0 17 chr13 41768645 41768765 -78515547 + B1_Mur1 SINE Alu 32 149 0 4 903 572 284 215 6 chr13 41769284 41769360 -78514952 - MLT1D LTR MaLR -79 426 349 4 903 1101 141 136 0 chr13 41769360 41769559 -78514753 + URR1A DNA MER1_type 1 226 0 4 903 572 284 215 6 chr13 41769559 41769812 -78514500 - MLT1D LTR MaLR -157 348 29 4 903 274 74 0 36 chr13 41771207 41771263 -78513049 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 4 903 510 266 51 46 chr13 41772662 41772859 -78511453 - MER2 DNA MER2_type -5 340 143 4 903 278 239 13 66 chr13 41772903 41772979 -78511333 - ID4 SINE ID 0 83 12 4 903 234 0 0 0 chr13 41773814 41773840 -78510472 + (T)n Simple_repeat Simple_repeat 1 26 0 4 903 237 309 32 11 chr13 41773855 41773950 -78510362 + LTR45C LTR ERV1 405 501 -38 4 903 662 308 60 89 chr13 41773973 41774544 -78509768 + MLT2B3 LTR ERVL 1 554 0 4 903 750 326 69 22 chr13 41775065 41775429 -78508883 - MLT1B LTR MaLR -4 386 6 4 903 417 39 0 0 chr13 41775479 41775530 -78508782 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 903 733 61 38 15 chr13 41775558 41775691 -78508621 + (TCTA)n Simple_repeat Simple_repeat 3 138 0 4 903 7806 228 32 29 chr13 41777403 41777736 -78506576 - Lx7 LINE L1 0 7696 7371 4 903 315 65 0 0 chr13 41777736 41777782 -78506530 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 903 252 0 0 0 chr13 41777782 41777809 -78506503 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 903 7806 228 32 29 chr13 41777809 41779288 -78505024 - Lx7 LINE L1 -326 7370 5879 4 903 234 0 0 0 chr13 41779309 41779335 -78504977 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 903 418 277 36 0 chr13 41779342 41779454 -78504858 + B3 SINE B2 1 116 -100 4 903 391 323 32 8 chr13 41780602 41780727 -78503585 - RSINE1 SINE B4 -29 136 9 4 903 619 280 60 91 chr13 41781312 41781418 -78502894 + MER2 DNA MER2_type 33 146 -199 4 903 1346 80 26 26 chr13 41781418 41781610 -78502702 - B2_Mm2 SINE B2 -3 192 1 4 903 619 280 60 91 chr13 41781610 41781821 -78502491 + MER2 DNA MER2_type 147 340 -5 4 903 185 271 0 0 chr13 41782055 41782103 -78502209 - MIRb SINE MIR -10 258 211 4 903 226 213 75 62 chr13 41782330 41782410 -78501902 + B1F SINE Alu 18 98 -51 4 903 192 77 0 0 chr13 41782450 41782476 -78501836 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 4 903 546 195 8 31 chr13 41782913 41783040 -78501272 + RSINE1 SINE B4 5 128 -37 4 903 180 0 0 0 chr13 41783721 41783741 -78500571 + (TA)n Simple_repeat Simple_repeat 1 20 0 4 903 189 0 0 0 chr13 41783741 41783761 -78500551 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 903 2138 55 6 61 chr13 41783783 41784113 -78500199 + ORR1A2 LTR MaLR 1 312 -15 4 903 686 187 58 22 chr13 41784154 41784291 -78500021 - B1_Mur4 SINE Alu -8 142 1 4 903 369 0 0 0 chr13 41785612 41785653 -78498659 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 903 454 187 196 0 chr13 41785667 41785774 -78498538 - B3A SINE B2 -59 139 12 4 903 213 200 0 0 chr13 41785823 41785863 -78498449 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 903 285 75 0 0 chr13 41785888 41785928 -78498384 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 903 219 36 0 0 chr13 41786253 41786281 -78498031 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 4 903 2686 58 6 0 chr13 41787036 41787361 -78496951 + ORR1A2 LTR MaLR 1 327 0 5 903 991 273 41 46 chr13 41787448 41787863 -78496449 - BGLII_B LTR ERVK -28 413 1 5 903 1294 241 171 57 chr13 41788862 41789354 -78494958 + Lx8 LINE L1 6922 7469 -4 5 903 604 244 62 2 chr13 41790609 41790784 -78493528 + B3 SINE B2 1 186 -12 5 903 292 299 52 0 chr13 41791526 41791623 -78492689 + RMER5 LTR ERV1 12 113 -421 5 903 416 19 19 0 chr13 41791802 41791855 -78492457 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 903 301 167 0 0 chr13 41791856 41791910 -78492402 - B4A SINE B4 -238 54 1 5 903 782 230 35 15 chr13 41791910 41792111 -78492201 + RMER5 LTR ERV1 330 534 0 5 903 373 242 108 0 chr13 41792400 41792520 -78491792 - MIR3 SINE MIR -5 203 71 5 903 958 306 13 48 chr13 41794372 41794746 -78489566 - MT2A LTR ERVL -71 462 102 5 903 1598 183 102 144 chr13 41795208 41795321 -78488991 - MT2A LTR ERVL 0 533 466 5 903 778 153 43 21 chr13 41795321 41795461 -78488851 - B1_Mus1 SINE Alu -5 143 1 5 903 1598 183 102 144 chr13 41795461 41795903 -78488409 - MT2A LTR ERVL -68 465 1 5 903 413 267 6 85 chr13 41795956 41796132 -78488180 + MLT1A LTR MaLR 1 162 -212 5 903 311 279 9 71 chr13 41796212 41796324 -78487988 + MLT1A LTR MaLR 304 408 0 5 903 1143 299 88 16 chr13 41797559 41798106 -78486206 - L1MB8 LINE L1 -191 5987 5402 5 903 288 229 0 0 chr13 41798209 41798279 -78486033 - L1MB8 LINE L1 -886 5260 5191 5 903 386 140 0 0 chr13 41798288 41798345 -78485967 - B1F SINE Alu -7 142 86 5 903 359 185 11 0 chr13 41798462 41798554 -78485758 + (TG)n Simple_repeat Simple_repeat 1 93 0 5 903 200 149 21 0 chr13 41798915 41798962 -78485350 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 903 880 90 115 0 chr13 41799637 41799759 -78484553 + B1_Mus1 SINE Alu 2 137 -11 5 903 269 26 0 26 chr13 41799759 41799798 -78484514 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 903 277 275 136 8 chr13 41800146 41800278 -78484034 - L2a LINE L2 0 3426 3278 5 903 435 19 0 0 chr13 41801364 41801416 -78482896 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 903 1472 100 13 13 chr13 41801822 41802054 -78482258 - ORR1A3 LTR MaLR -8 318 87 5 903 789 95 0 0 chr13 41802054 41802170 -78482142 + (CA)n Simple_repeat Simple_repeat 1 116 0 5 903 441 0 0 0 chr13 41802559 41802608 -78481704 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 903 4969 147 9 16 chr13 41803602 41804417 -78479895 + Lx LINE L1 5846 6654 0 5 903 203 271 0 0 chr13 41804459 41804518 -78479794 + A-rich Low_complexity Low_complexity 1 59 0 5 903 243 0 0 0 chr13 41806022 41806049 -78478263 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 903 1106 210 46 114 chr13 41806679 41807072 -78477240 + MTE2a LTR MaLR 14 379 0 5 903 310 298 38 19 chr13 41807625 41807731 -78476581 + PB1D10 SINE Alu 4 111 -6 5 903 21 0 0 0 chr13 41807824 41807845 -78476467 + AT_rich Low_complexity Low_complexity 1 21 0 5 903 508 300 121 39 chr13 41807971 41808384 -78475928 - L1ME2 LINE L1 -7 6157 5711 5 903 453 66 0 0 chr13 41808425 41808486 -78475826 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 903 777 289 96 39 chr13 41808833 41809294 -78475018 + Lx8 LINE L1 5858 6400 -1296 5 903 723 108 50 14 chr13 41809295 41809436 -78474876 + B1_Mus2 SINE Alu 2 147 0 5 903 1183 15 15 0 chr13 41810413 41810549 -78473763 + B1_Mm SINE Alu 1 138 -9 5 903 470 139 23 0 chr13 41810571 41810657 -78473655 + ORR1C1 LTR MaLR 13 100 -278 5 903 1419 182 145 25 chr13 41810673 41811075 -78473237 + RMER16 LTR ERVK 1 531 -2 5 903 924 173 76 0 chr13 41811075 41811260 -78473052 + ORR1C1 LTR MaLR 176 374 -4 5 903 3368 243 51 92 chr13 41811265 41811903 -78472409 + ORR1C1-int LTR MaLR 1 659 -711 5 112 687 171 56 28 chr13 41811903 41812047 -78472265 + B1_Mur3 SINE Alu 2 149 0 5 904 3368 243 51 92 chr13 41812047 41812651 -78471661 + ORR1C1-int LTR MaLR 660 1190 -180 5 904 932 178 200 0 chr13 41812879 41813059 -78471253 - B3 SINE B2 0 216 1 5 904 663 289 79 116 chr13 41813082 41813462 -78470850 - MTEa LTR MaLR 0 379 14 5 904 366 281 97 69 chr13 41813738 41814080 -78470232 + ORR1C1 LTR MaLR 1 378 -1 5 904 189 0 0 0 chr13 41814609 41814630 -78469682 + (A)n Simple_repeat Simple_repeat 1 21 0 5 904 849 286 21 35 chr13 41815230 41815516 -78468796 + B4A SINE B4 1 282 -10 5 904 188 103 0 49 chr13 41815544 41815585 -78468727 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 5 904 180 306 0 16 chr13 41817356 41817419 -78466893 + MIR SINE MIR 97 158 -104 5 904 479 319 133 68 chr13 41817655 41817736 -78466576 + L1MEc LINE L1 37 134 -6266 5 904 361 0 0 39 chr13 41817736 41817787 -78466525 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 5 904 479 319 133 68 chr13 41817787 41818004 -78466308 + L1MEc LINE L1 135 365 -6035 5 904 237 33 0 0 chr13 41818004 41818034 -78466278 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 904 479 319 133 68 chr13 41818034 41818929 -78465383 + L1MEc LINE L1 366 1308 -5092 5 904 677 229 86 0 chr13 41819453 41819628 -78464684 - B3 SINE B2 -26 190 1 5 904 204 40 0 0 chr13 41820284 41820309 -78464003 + (CAA)n Simple_repeat Simple_repeat 2 26 0 5 904 482 270 158 53 chr13 41820442 41820688 -78463624 + B4A SINE B4 2 273 -19 5 904 494 257 68 120 chr13 41820898 41821424 -78462888 - Charlie2a DNA MER1_type -1176 1685 1187 5 904 741 170 0 0 chr13 41821425 41821590 -78462722 + (TG)n Simple_repeat Simple_repeat 2 166 0 5 904 1152 56 28 0 chr13 41821785 41821928 -78462384 - B1_Mus1 SINE Alu 0 148 2 5 904 4110 150 39 13 chr13 41822043 41822737 -78461575 - Lx5 LINE L1 0 7050 6339 5 904 23 86 0 0 chr13 41823579 41823637 -78460675 + AT_rich Low_complexity Low_complexity 1 58 0 5 904 205 357 4 11 chr13 41824057 41824187 -78460125 - MIRm SINE MIR -54 208 81 5 904 30 0 0 0 chr13 41824419 41824449 -78459863 + AT_rich Low_complexity Low_complexity 1 30 0 5 904 260 241 58 0 chr13 41825517 41825604 -78458708 - ORR1A0 LTR MaLR -208 138 47 5 904 456 186 41 33 chr13 41825597 41825719 -78458593 - ORR1B2 LTR MaLR -244 123 1 5 904 490 301 81 50 chr13 41825719 41826026 -78458286 + Cheshire DNA MER1_type 169 485 -1935 5 904 21 36 0 0 chr13 41826230 41826258 -78458054 + AT_rich Low_complexity Low_complexity 1 28 0 5 904 255 61 0 0 chr13 41826268 41826301 -78458011 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 904 195 42 0 0 chr13 41826338 41826362 -78457950 + (CAAG)n Simple_repeat Simple_repeat 1 24 0 5 904 1778 259 50 63 chr13 41826376 41827014 -78457298 + Cheshire DNA MER1_type 762 1391 -1029 5 904 732 302 72 40 chr13 41827870 41828325 -78455987 + Cheshire DNA MER1_type 1949 2418 -2 5 904 1164 231 139 21 chr13 41829040 41829371 -78454941 + ORR1D2 LTR MaLR 1 370 0 5 904 863 280 17 48 chr13 41830100 41830365 -78453947 + B4 SINE B4 13 274 -18 5 904 1008 126 0 0 chr13 41830365 41830539 -78453773 + (CA)n Simple_repeat Simple_repeat 2 175 0 5 904 863 280 17 48 chr13 41830539 41830562 -78453750 + B4 SINE B4 275 292 0 5 904 966 144 0 0 chr13 41830578 41830758 -78453554 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 904 21 0 0 0 chr13 41830842 41830863 -78453449 + AT_rich Low_complexity Low_complexity 1 21 0 5 904 398 352 74 33 chr13 41830870 41831114 -78453198 - LTR50 LTR ERVL -154 641 388 5 904 477 50 0 0 chr13 41832560 41832620 -78451692 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 904 385 318 23 30 chr13 41832676 41832809 -78451503 + MER2 DNA MER2_type 170 301 -44 5 904 1275 95 20 59 chr13 41834049 41834251 -78450061 + B2_Mm2 SINE B2 2 195 0 5 904 1218 260 45 32 chr13 41834582 41834956 -78449356 + MTE2b LTR MaLR 1 379 0 5 904 432 288 29 7 chr13 41835382 41835522 -78448790 - B3A SINE B2 -48 150 8 5 904 215 278 0 0 chr13 41835676 41835730 -78448582 - PB1D10 SINE Alu -5 112 59 5 904 362 277 151 48 chr13 41836049 41836235 -78448077 + L1M5 LINE L1 5622 5826 -414 5 904 3319 57 2 14 chr13 41836483 41836909 -78447403 + BGLII LTR ERVK 1 421 0 5 904 310 327 58 7 chr13 41836924 41837078 -78447234 - L1M5 LINE L1 -1726 4420 4259 5 904 570 124 0 0 chr13 41837079 41837168 -78447144 + (CA)n Simple_repeat Simple_repeat 2 90 0 5 904 708 318 70 34 chr13 41838025 41838399 -78445913 + MTD LTR MaLR 1 379 0 5 904 8632 27 0 1 chr13 41838444 41839474 -78444838 - L1Md_T LINE L1 -2 6580 5553 5 904 294 356 43 59 chr13 41839976 41840230 -78444082 - MLT1F LTR MaLR -292 256 7 5 904 821 312 76 29 chr13 41840273 41840656 -78443656 - MTD LTR MaLR -14 405 5 5 904 200 200 0 20 chr13 41840664 41840715 -78443597 + GA-rich Low_complexity Low_complexity 2 51 0 5 904 951 311 70 17 chr13 41840883 41841299 -78443013 + L1MC LINE L1 5372 5809 -2073 5 904 21 0 0 0 chr13 41841492 41841513 -78442799 + AT_rich Low_complexity Low_complexity 1 21 0 5 904 315 0 0 0 chr13 41842577 41842612 -78441700 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 904 386 248 95 47 chr13 41844541 41844689 -78439623 - MLT2D LTR ERVL 0 560 406 5 904 183 279 154 55 chr13 41845002 41845093 -78439219 + MER5B DNA MER1_type 8 107 -71 5 904 1054 128 12 0 chr13 41845368 41845532 -78438780 + B2_Mm1t SINE B2 14 179 -14 5 904 312 97 308 34 chr13 41845561 41845678 -78438634 + B2_Mm2 SINE B2 47 195 0 5 904 311 349 57 28 chr13 41846871 41847048 -78437264 + MLT1C LTR MaLR 286 467 0 5 904 544 301 155 14 chr13 41847527 41847823 -78436489 + MER44A DNA MER2_type 1 338 -1 5 904 938 217 205 101 chr13 41849463 41849960 -78434352 - RMER2 LTR ERV1 -18 549 1 5 904 390 202 83 0 chr13 41850515 41850556 -78433756 - RMER2 LTR ERV1 0 567 525 5 904 200 35 35 0 chr13 41850556 41850585 -78433727 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 904 390 202 83 0 chr13 41850585 41850652 -78433660 - RMER2 LTR ERV1 -43 524 451 5 904 396 0 0 0 chr13 41850660 41850704 -78433608 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 904 332 117 49 16 chr13 41851030 41851091 -78433221 - RMER2 LTR ERV1 -502 65 3 5 904 447 101 0 0 chr13 41851201 41851280 -78433032 + (TG)n Simple_repeat Simple_repeat 2 80 0 5 904 759 274 38 62 chr13 41851281 41851573 -78432739 - B4A SINE B4 -6 286 2 5 904 815 0 11 0 chr13 41851579 41851674 -78432638 + (TTC)n Simple_repeat Simple_repeat 1 96 0 5 904 1216 114 17 22 chr13 41851674 41851853 -78432459 - B2_Mm2 SINE B2 -17 178 1 5 904 315 242 34 145 chr13 41851979 41852056 -78432256 + RMER15 LTR ERVL 1 65 -510 6 904 1275 91 26 11 chr13 41852056 41852245 -78432067 + B2_Mm2 SINE B2 2 193 -2 6 904 315 242 34 145 chr13 41852245 41852346 -78431966 + RMER15 LTR ERVL 66 159 -416 6 904 639 287 44 19 chr13 41852344 41852550 -78431762 + RMER15 LTR ERVL 275 485 -90 6 904 207 0 0 0 chr13 41852876 41852899 -78431413 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 904 451 212 115 0 chr13 41852905 41853018 -78431294 - B1_Mur1 SINE Alu -9 140 15 6 904 288 0 0 0 chr13 41853260 41853292 -78431020 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 904 260 49 0 47 chr13 41853292 41853334 -78430978 + (CAGAGA)n Simple_repeat Simple_repeat 3 43 0 6 904 837 245 70 35 chr13 41853502 41853789 -78430523 - ORR1E LTR MaLR -16 343 47 6 904 261 130 36 18 chr13 41854058 41854113 -78430199 - ORR1E LTR MaLR -303 56 1 6 904 25 0 0 0 chr13 41854805 41854830 -78429482 + AT_rich Low_complexity Low_complexity 1 25 0 6 904 306 0 0 0 chr13 41855561 41855595 -78428717 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 904 334 258 101 0 chr13 41855597 41855686 -78428626 + MER63B DNA AcHobo 338 435 -1 6 904 572 228 0 35 chr13 41856906 41857047 -78427265 + B3A SINE B2 8 143 -55 6 904 360 0 0 0 chr13 41857112 41857152 -78427160 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 904 205 138 0 0 chr13 41857281 41857310 -78427002 + (G)n Simple_repeat Simple_repeat 1 29 0 6 904 694 260 206 17 chr13 41857755 41858099 -78426213 - MTC LTR MaLR -8 411 3 6 904 1170 68 0 0 chr13 41858244 41858392 -78425920 + B1_Mus1 SINE Alu 1 148 0 6 904 336 271 49 11 chr13 41858521 41858664 -78425648 + L1MA4 LINE L1 5759 5930 -370 6 904 216 175 0 0 chr13 41858703 41858743 -78425569 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 904 582 62 10 30 chr13 41859483 41859582 -78424730 - L1Md_F2 LINE L1 -3 6579 6483 6 904 444 259 8 17 chr13 41859607 41859725 -78424587 - PB1D10 SINE Alu 0 117 1 6 904 1230 280 80 63 chr13 41860916 41861547 -78422765 + L1_Mus4 LINE L1 5137 5807 -829 6 904 870 265 41 85 chr13 41861917 41862329 -78421983 + RMER5 LTR ERV1 141 534 0 6 904 514 269 114 48 chr13 41864171 41864674 -78419638 + L1MB3 LINE L1 5141 5676 -507 6 904 515 240 208 16 chr13 41864751 41865062 -78419250 + L1MB3 LINE L1 5811 6181 -2 6 904 1458 175 77 72 chr13 41865078 41865454 -78418858 + MTD LTR MaLR 1 378 -41 6 904 358 220 128 45 chr13 41865478 41865611 -78418701 - RLTR11A2 LTR ERVK -26 427 284 6 904 775 234 25 62 chr13 41865736 41866036 -78418276 - RLTR11A2 LTR ERVK -168 273 1 6 904 941 128 0 6 chr13 41866785 41866966 -78417346 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 904 336 64 0 0 chr13 41866989 41867036 -78417276 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 904 583 174 169 33 chr13 41867427 41867598 -78416714 - B3 SINE B2 -13 180 1 6 904 360 299 0 10 chr13 41868308 41868406 -78415906 + MTE2a LTR MaLR 2 98 -281 6 904 1547 156 92 3 chr13 41868406 41868721 -78415591 - ORR1B2 LTR MaLR 0 367 25 6 904 616 313 0 11 chr13 41868761 41868942 -78415370 + MTE2a LTR MaLR 63 241 -138 6 904 1319 100 21 0 chr13 41870448 41870638 -78413674 - B2_Mm2 SINE B2 0 195 2 6 904 348 256 13 0 chr13 41871498 41871576 -78412736 + ID4_ SINE ID 2 80 -3 6 904 2225 155 34 3 chr13 41871590 41871946 -78412366 + ORR1B2 LTR MaLR 1 367 0 6 904 403 312 0 79 chr13 41871947 41872086 -78412226 + ID_B1 SINE B4 94 221 -3 6 904 243 0 0 0 chr13 41872398 41872425 -78411887 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 6 904 378 234 0 0 chr13 41872561 41872668 -78411644 + (TG)n Simple_repeat Simple_repeat 2 108 0 6 904 187 314 37 37 chr13 41873056 41873165 -78411147 + L2 LINE L2 2755 2863 -556 6 904 320 202 24 0 chr13 41873257 41873341 -78410971 + (CACG)n Simple_repeat Simple_repeat 2 87 0 6 904 286 183 70 96 chr13 41876472 41876587 -78407725 + BGLII_B LTR ERVK 103 214 -227 6 904 23 86 0 0 chr13 41876803 41876861 -78407451 + AT_rich Low_complexity Low_complexity 1 58 0 6 904 911 249 85 4 chr13 41877355 41877625 -78406687 + MTEa LTR MaLR 85 376 -3 6 904 1113 58 6 13 chr13 41878100 41878257 -78406055 + B2_Mm2 SINE B2 21 176 -19 6 904 189 0 0 0 chr13 41878275 41878296 -78406016 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 6 904 1270 213 55 52 chr13 41879299 41879497 -78404815 + ORR1E LTR MaLR 6 195 -164 6 904 606 39 0 0 chr13 41879497 41879574 -78404738 + (TC)n Simple_repeat Simple_repeat 1 77 0 6 904 1270 213 55 52 chr13 41879574 41879722 -78404590 + ORR1E LTR MaLR 196 352 -7 6 904 204 40 0 0 chr13 41880680 41880705 -78403607 + (TCCCC)n Simple_repeat Simple_repeat 5 29 0 6 904 2634 73 0 0 chr13 41880876 41881203 -78403109 + ORR1A2 LTR MaLR 1 327 0 6 904 2751 49 7 148 chr13 41882743 41883197 -78401115 - RLTR10 LTR ERVK 0 390 1 6 904 1029 89 67 67 chr13 41884793 41884986 -78399326 + B2_Mm2 SINE B2 3 195 0 6 904 7517 51 4 3 chr13 41885157 41886079 -78398233 + L1Md_F2 LINE L1 5660 6582 0 6 904 254 297 21 42 chr13 41886176 41886189 -78398123 + B4A SINE B4 77 87 -205 6 904 615 201 12 22 chr13 41886189 41886332 -78397980 + PB1D9 SINE Alu 3 139 -11 6 904 579 303 0 0 chr13 41886944 41887086 -78397226 - B1F SINE Alu -7 142 1 6 904 1105 288 71 43 chr13 41887304 41888026 -78396286 + L1_Rod LINE L1 1952 2715 -3132 6 904 351 160 103 39 chr13 41888195 41888273 -78396039 - PB1D7 SINE Alu -2 118 36 6 904 333 290 80 0 chr13 41889551 41889651 -78394661 + RSINE1 SINE B4 56 163 -2 6 904 222 62 0 0 chr13 41889652 41889684 -78394628 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 6 904 293 360 12 0 chr13 41889700 41889781 -78394531 - MER2 DNA MER2_type -6 339 258 6 904 846 186 12 0 chr13 41889781 41889948 -78394364 - URR1A DNA MER1_type 0 226 58 6 904 270 56 0 0 chr13 41890011 41890047 -78394265 + (TCTG)n Simple_repeat Simple_repeat 2 37 0 6 904 512 291 66 0 chr13 41890048 41890199 -78394113 - RSINE1 SINE B4 -2 163 3 6 904 547 276 93 23 chr13 41890199 41890414 -78393898 - MER2 DNA MER2_type -85 260 31 6 904 21 71 0 0 chr13 41890720 41890762 -78393550 + AT_rich Low_complexity Low_complexity 1 42 0 6 904 359 279 28 73 chr13 41890935 41891113 -78393199 + B4A SINE B4 6 175 -117 6 904 530 250 160 68 chr13 41891899 41892105 -78392207 - B4A SINE B4 -67 225 1 6 904 1133 82 0 0 chr13 41892275 41892422 -78391890 + B1_Mus2 SINE Alu 1 147 0 6 904 1191 276 40 3 chr13 41892459 41892783 -78391529 + ORR1E LTR MaLR 24 359 0 6 904 8042 63 8 1 chr13 41893678 41894908 -78389404 - L1_Mus1 LINE L1 0 6654 5334 6 904 244 64 43 0 chr13 41894941 41894988 -78389324 + (TTTTTG)n Simple_repeat Simple_repeat 3 51 0 6 904 1295 212 200 70 chr13 41895163 41895664 -78388648 + RMER2 LTR ERV1 2 567 0 6 904 582 281 106 78 chr13 41895792 41896189 -78388123 - MLT1A1 LTR MaLR 0 408 1 6 904 400 271 75 30 chr13 41898134 41898267 -78386045 + MLT1A1 LTR MaLR 268 406 -2 6 904 322 315 13 83 chr13 41898432 41898588 -78385724 + B4A SINE B4 3 147 -145 6 904 276 53 0 0 chr13 41898760 41898798 -78385514 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 904 258 171 0 56 chr13 41898798 41898959 -78385353 + GA-rich Low_complexity Low_complexity 1 152 0 6 904 297 0 0 0 chr13 41898997 41899030 -78385282 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 904 330 26 0 0 chr13 41899030 41899068 -78385244 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 904 554 93 0 11 chr13 41901254 41901341 -78382971 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 6 904 1182 75 0 0 chr13 41901342 41901489 -78382823 - B1_Mus2 SINE Alu 0 147 1 6 904 886 35 0 0 chr13 41901500 41901614 -78382698 + B1_Mm SINE Alu 28 141 -6 6 904 189 0 0 0 chr13 41901617 41901638 -78382674 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 6 904 279 0 0 0 chr13 41902321 41902352 -78381960 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 904 1242 34 0 0 chr13 41903745 41903891 -78380421 + B1_Mm SINE Alu 2 147 0 6 904 237 65 0 0 chr13 41903891 41903922 -78380390 + (A)n Simple_repeat Simple_repeat 1 31 0 6 904 198 0 0 0 chr13 41904380 41904402 -78379910 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 904 616 286 149 50 chr13 41904630 41904891 -78379421 - B4A SINE B4 0 292 6 6 904 21 0 0 0 chr13 41904899 41904920 -78379392 + AT_rich Low_complexity Low_complexity 1 21 0 6 904 339 203 0 0 chr13 41904931 41905005 -78379307 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 904 980 298 17 38 chr13 41905018 41905084 -78379228 - B4A SINE B4 -4 288 230 6 904 2397 161 41 17 chr13 41905084 41905495 -78378817 - MTC LTR MaLR 0 421 1 6 904 980 298 17 38 chr13 41905495 41905721 -78378591 - B4A SINE B4 -63 229 2 6 904 945 234 67 42 chr13 41906903 41907188 -78377124 + B4A SINE B4 1 292 0 6 904 729 224 0 0 chr13 41907197 41907454 -78376858 + (CA)n Simple_repeat Simple_repeat 1 257 0 6 904 747 204 2 0 chr13 41907478 41908009 -78376303 + (CA)n Simple_repeat Simple_repeat 1 532 0 6 904 180 0 0 0 chr13 41908873 41908893 -78375419 + (T)n Simple_repeat Simple_repeat 1 20 0 6 904 1246 41 0 0 chr13 41909059 41909206 -78375106 + B1_Mm SINE Alu 1 147 0 6 904 843 239 33 23 chr13 41909220 41909434 -78374878 - B3 SINE B2 0 216 1 6 904 185 200 0 39 chr13 41910005 41910057 -78374255 + (TATATG)n Simple_repeat Simple_repeat 2 51 0 6 904 195 162 0 0 chr13 41910529 41910566 -78373746 + (TTG)n Simple_repeat Simple_repeat 1 37 0 6 904 1101 83 0 14 chr13 41910566 41910713 -78373599 - B1_Mm SINE Alu -2 145 1 6 904 267 103 0 0 chr13 41910952 41910991 -78373321 + (A)n Simple_repeat Simple_repeat 1 39 0 6 904 1123 119 22 33 chr13 41910998 41911180 -78373132 + B2_Mm2 SINE B2 2 181 -14 6 904 282 136 618 11 chr13 41911212 41911301 -78373011 + B2_Mm2 SINE B2 47 189 -6 6 904 327 281 61 88 chr13 41912061 41912209 -78372103 + B4 SINE B4 19 162 -130 6 904 258 32 0 0 chr13 41912290 41912321 -78371991 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 904 393 22 0 0 chr13 41912322 41912368 -78371944 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 904 2788 41 105 49 chr13 41913497 41913886 -78370426 + IAPLTR2a LTR ERVK 1 411 0 7 904 290 291 45 0 chr13 41913909 41914019 -78370293 - MIR SINE MIR -69 193 79 7 904 612 304 57 46 chr13 41914230 41914513 -78369799 - B4A SINE B4 -4 288 3 7 904 405 58 0 0 chr13 41915134 41915186 -78369126 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 904 399 21 0 0 chr13 41915811 41915859 -78368453 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 904 24 0 0 0 chr13 41916371 41916395 -78367917 + AT_rich Low_complexity Low_complexity 1 24 0 7 904 746 147 196 0 chr13 41916742 41916807 -78367505 + RMER1B Other Other 861 936 -130 7 904 339 25 0 0 chr13 41916807 41916847 -78367465 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 904 746 147 196 0 chr13 41916847 41916944 -78367368 + RMER1B Other Other 937 1053 -13 7 904 424 339 13 50 chr13 41916970 41917209 -78367103 + Lx9 LINE L1 7197 7426 -218 7 904 249 180 0 0 chr13 41917836 41917886 -78366426 + GA-rich Low_complexity Low_complexity 6 55 0 7 904 281 320 25 37 chr13 41918186 41918348 -78365964 - MIRb SINE MIR -90 178 19 7 904 621 231 76 13 chr13 41920268 41920426 -78363886 + B3A SINE B2 9 176 -22 7 904 22 35 0 0 chr13 41920594 41920623 -78363689 + AT_rich Low_complexity Low_complexity 1 29 0 7 904 473 244 23 64 chr13 41921606 41921777 -78362535 + RSINE1 SINE B4 2 165 0 7 904 582 65 33 0 chr13 41921801 41921893 -78362419 + (TA)n Simple_repeat Simple_repeat 2 96 0 7 904 656 241 33 84 chr13 41922461 41922674 -78361638 + B3 SINE B2 15 216 0 7 904 242 179 44 15 chr13 41922748 41922816 -78361496 + (TTTA)n Simple_repeat Simple_repeat 1 70 0 7 904 773 168 42 0 chr13 41922816 41922959 -78361353 - B1_Mur4 SINE Alu 0 150 2 7 904 574 309 45 55 chr13 41924808 41925116 -78359196 - MLT1A0 LTR MaLR -48 317 13 7 904 183 259 0 36 chr13 41925801 41925857 -78358455 + MIR SINE MIR 198 251 -11 7 904 435 274 0 0 chr13 41925901 41926007 -78358305 + B1_Mur1 SINE Alu 44 149 0 7 904 1182 291 79 73 chr13 41926017 41926160 -78358152 + L1MA8 LINE L1 5330 5471 -820 7 904 420 20 0 0 chr13 41926160 41926209 -78358103 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 904 1182 291 79 73 chr13 41926209 41926555 -78357757 + L1MA8 LINE L1 5472 5814 -477 7 904 1096 50 0 35 chr13 41926555 41926700 -78357612 - B1_Mus2 SINE Alu -6 141 2 7 904 1182 291 79 73 chr13 41926700 41927006 -78357306 + L1MA8 LINE L1 5815 6131 -160 7 904 585 274 136 9 chr13 41927006 41927234 -78357078 + Lx8 LINE L1 6983 7239 -234 7 904 456 218 120 13 chr13 41927446 41927604 -78356708 + L1MA8 LINE L1 6115 6289 -2 7 904 391 315 16 18 chr13 41927690 41927883 -78356429 - L2c LINE L2 -20 3355 3194 7 904 4472 67 24 19 chr13 41928217 41928798 -78355514 - MT2B2 LTR ERVL 0 584 1 7 904 296 304 2 6 chr13 41929344 41929426 -78354886 - PB1D10 SINE Alu -47 80 1 7 904 341 319 82 26 chr13 41929427 41929804 -78354508 - L1MDa LINE L1 -4024 2609 2212 7 904 2163 257 78 19 chr13 41930050 41930688 -78353624 - Lx8 LINE L1 -613 6860 6185 7 904 3535 52 77 0 chr13 41931010 41931451 -78352861 - MT2C_Mm LTR ERVL 0 475 1 7 904 207 139 0 0 chr13 41931487 41931523 -78352789 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 904 281 267 0 128 chr13 41931523 41931609 -78352703 - RSINE1 SINE B4 0 165 91 7 904 553 301 131 52 chr13 41931633 41932384 -78351928 - L1MDa LINE L1 -4740 1893 1084 7 904 540 354 25 15 chr13 41932482 41932680 -78351632 - B4A SINE B4 -22 270 71 7 904 215 384 51 34 chr13 41933657 41933835 -78350477 + MIRb SINE MIR 18 198 -70 7 904 1276 154 0 22 chr13 41933938 41934163 -78350149 - URR1B DNA MER1_type 0 225 6 7 904 634 227 229 30 chr13 41935250 41935556 -78348756 + MLT1A0 LTR MaLR 2 365 0 7 904 26 64 0 0 chr13 41935559 41935606 -78348706 + AT_rich Low_complexity Low_complexity 1 47 0 7 904 45 0 0 0 chr13 41935831 41935876 -78348436 + AT_rich Low_complexity Low_complexity 1 45 0 7 904 473 167 51 20 chr13 41935943 41936041 -78348271 - B1_Mur4 SINE Alu -48 102 2 7 904 330 26 0 0 chr13 41936379 41936418 -78347894 + (TC)n Simple_repeat Simple_repeat 2 40 0 7 904 270 336 43 7 chr13 41937110 41937251 -78347061 + MER3 DNA MER1_type 1 146 -63 7 904 1133 202 9 76 chr13 41938205 41938670 -78345642 + RLTR20D LTR ERVK 1 549 -2 7 904 207 0 0 0 chr13 41939209 41939232 -78345080 + (TC)n Simple_repeat Simple_repeat 2 24 0 7 904 31 76 0 0 chr13 41940354 41940420 -78343892 + AT_rich Low_complexity Low_complexity 1 66 0 7 904 1228 41 0 0 chr13 41940840 41940986 -78343326 - B1_Mm SINE Alu 0 147 2 7 905 509 236 59 9 chr13 41943968 41944186 -78340126 + L1MB5 LINE L1 5456 5687 -487 7 905 995 204 10 5 chr13 41944195 41944397 -78339915 + B3 SINE B2 9 211 -5 7 905 475 323 71 31 chr13 41944509 41944835 -78339477 + L1MB5 LINE L1 5819 6157 -17 7 905 508 290 7 14 chr13 41945025 41945165 -78339147 - B1_Mur1 SINE Alu -1 148 10 7 905 295 289 40 81 chr13 41945056 41945180 -78339132 - ID_B1 SINE B4 -27 197 79 7 905 804 161 0 0 chr13 41945224 41945367 -78338945 + CT-rich Low_complexity Low_complexity 4 146 0 7 905 313 343 0 18 chr13 41947399 41947509 -78336803 - Tigger7 DNA MER2_type -7 2484 2377 7 905 215 226 0 36 chr13 41947564 41947619 -78336693 + B1F SINE Alu 76 128 -21 7 905 594 276 129 30 chr13 41947641 41947873 -78336439 - Tigger7 DNA MER2_type -2103 388 134 7 905 307 247 34 0 chr13 41947989 41948078 -78336234 + B1F SINE Alu 24 115 -34 7 905 360 0 0 0 chr13 41948078 41948118 -78336194 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 905 387 60 0 0 chr13 41948120 41948170 -78336142 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 905 427 269 41 28 chr13 41948614 41948759 -78335553 + RSINE1 SINE B4 3 149 -16 7 905 213 39 0 0 chr13 41948769 41948795 -78335517 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 905 306 87 0 0 chr13 41949347 41949393 -78334919 + (CAAAC)n Simple_repeat Simple_repeat 5 50 0 7 905 469 115 289 9 chr13 41949539 41949653 -78334659 - B2_Mm2 SINE B2 -5 190 45 7 905 1267 107 11 0 chr13 41949681 41949858 -78334454 - B2_Mm1t SINE B2 -14 179 1 7 905 369 0 0 0 chr13 41952157 41952198 -78332114 + (TGG)n Simple_repeat Simple_repeat 1 41 0 7 905 227 306 10 39 chr13 41952945 41953047 -78331265 + MTEa LTR MaLR 281 379 0 7 905 568 337 83 56 chr13 41953235 41953898 -78330414 + Lx8 LINE L1 6785 7465 -8 7 905 1497 222 53 48 chr13 41954176 41954574 -78329738 - MTD LTR MaLR -17 402 3 7 905 706 244 0 0 chr13 41954578 41954713 -78329599 + RSINE1 SINE B4 20 154 -11 7 905 3102 108 199 14 chr13 41954809 41955316 -78328996 - MT2B LTR ERVL 0 601 1 7 905 570 313 90 35 chr13 41955330 41955585 -78328727 - MTE2a LTR MaLR -72 307 39 7 905 324 0 0 0 chr13 41955642 41955678 -78328634 + (TTA)n Simple_repeat Simple_repeat 2 37 0 7 905 198 103 0 0 chr13 41956281 41956310 -78328002 + (A)n Simple_repeat Simple_repeat 1 29 0 7 905 270 0 0 0 chr13 41956599 41956629 -78327683 + (A)n Simple_repeat Simple_repeat 1 30 0 7 905 667 229 109 21 chr13 41958601 41958793 -78325519 - B3 SINE B2 -6 210 2 7 905 204 67 0 0 chr13 41962088 41962118 -78322194 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 7 905 2525 71 9 0 chr13 41962225 41962547 -78321765 - ORR1A2 LTR MaLR -2 325 1 7 905 403 295 33 13 chr13 41962663 41962814 -78321498 + L1MA4 LINE L1 5843 5996 -304 7 905 450 0 0 0 chr13 41963205 41963255 -78321057 + (TG)n Simple_repeat Simple_repeat 2 51 0 7 905 345 217 0 42 chr13 41963421 41963493 -78320819 + PB1D10 SINE Alu 40 108 -9 7 905 331 323 102 62 chr13 41963836 41964159 -78320153 + LTR16B2 LTR ERVL 127 462 0 7 905 411 92 0 0 chr13 41964350 41964415 -78319897 + (CA)n Simple_repeat Simple_repeat 2 66 0 7 905 307 143 48 0 chr13 41964514 41964577 -78319735 + B1_Mur1 SINE Alu 58 123 -26 7 905 852 276 103 12 chr13 41964831 41965172 -78319140 - MLT1B LTR MaLR -14 376 5 7 905 27 0 0 0 chr13 41965485 41965512 -78318800 + AT_rich Low_complexity Low_complexity 1 27 0 7 905 459 48 0 0 chr13 41966508 41966570 -78317742 + (TTCA)n Simple_repeat Simple_repeat 3 64 0 7 905 291 294 130 0 chr13 41966695 41966787 -78317525 - PB1D10 SINE Alu -10 107 4 7 905 192 97 0 0 chr13 41966818 41966849 -78317463 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 905 516 16 0 0 chr13 41966957 41967018 -78317294 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 905 23 0 0 0 chr13 41968703 41968726 -78315586 + AT_rich Low_complexity Low_complexity 1 23 0 7 905 3173 66 5 0 chr13 41968920 41969314 -78314998 + MTA_Mm LTR MaLR 1 396 0 7 905 531 280 101 0 chr13 41969322 41969529 -78314783 - L1MA7 LINE L1 -374 5917 5690 7 905 855 222 88 22 chr13 41969538 41969810 -78314502 + L1MA6 LINE L1 6011 6300 0 7 905 1205 261 41 7 chr13 41970413 41970683 -78313629 + B4A SINE B4 12 290 -2 7 905 729 174 12 6 chr13 41970743 41970905 -78313407 + GA-rich Low_complexity Low_complexity 2 164 0 7 905 1119 79 0 0 chr13 41971035 41971174 -78313138 + B1_Mus2 SINE Alu 1 139 -8 7 905 1716 206 14 6 chr13 41971184 41971546 -78312766 - ORR1D1 LTR MaLR 0 374 10 7 905 11895 85 0 3 chr13 41971547 41973853 -78310459 - L1_Mus1 LINE L1 0 6567 4267 7 905 6545 29 23 4 chr13 41974128 41974899 -78309413 - L1Md_F2 LINE L1 -6 6576 5791 7 905 228 232 203 0 chr13 41975218 41975287 -78309025 - ID4_ SINE ID 0 83 1 7 905 513 0 0 0 chr13 41976326 41976383 -78307929 + (TC)n Simple_repeat Simple_repeat 2 58 0 7 905 261 0 0 0 chr13 41976383 41976411 -78307901 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 905 360 0 0 0 chr13 41977730 41977770 -78306542 + (GA)n Simple_repeat Simple_repeat 1 40 0 8 905 219 334 41 55 chr13 41979088 41979234 -78305078 - MIR3 SINE MIR -112 156 6 8 905 206 316 50 12 chr13 41979462 41979542 -78304770 + L2a LINE L2 3342 3424 -2 8 905 189 0 0 0 chr13 41980202 41980223 -78304089 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 905 258 192 0 0 chr13 41981835 41981887 -78302425 + A-rich Low_complexity Low_complexity 1 52 0 8 905 625 180 17 11 chr13 41981885 41982059 -78302253 + GA-rich Low_complexity Low_complexity 3 177 0 8 905 961 108 23 6 chr13 41982069 41982246 -78302066 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 8 905 3378 38 3 0 chr13 41983274 41983665 -78300647 + MTA_Mm LTR MaLR 1 392 -4 8 905 2633 51 39 0 chr13 41983665 41984001 -78300311 + L1Md_F3 LINE L1 6236 6584 0 8 905 250 184 0 58 chr13 41984067 41984119 -78300193 + L1MA6 LINE L1 5890 5938 -362 8 905 602 311 74 26 chr13 41984140 41984411 -78299901 + B4A SINE B4 9 292 0 8 905 201 60 19 74 chr13 41984771 41984825 -78299487 + (TATAA)n Simple_repeat Simple_repeat 5 55 0 8 905 652 301 16 21 chr13 41987673 41987863 -78296449 - B3A SINE B2 -9 189 1 8 905 12121 23 0 0 chr13 41988296 41990366 -78293946 - L1Md_T LINE L1 0 6582 4513 8 905 202 27 51 51 chr13 41990378 41990417 -78293895 + (TTTAA)n Simple_repeat Simple_repeat 2 40 0 8 905 1943 116 62 3 chr13 41990425 41990729 -78293583 - Lx3A LINE L1 -5 6976 6655 8 905 514 270 0 0 chr13 41990729 41990835 -78293477 + B3 SINE B2 25 130 -86 8 905 291 356 0 50 chr13 41990976 41991115 -78293197 + ID_B1 SINE B4 70 201 -23 8 905 349 361 0 29 chr13 41990993 41991130 -78293182 + B1F1 SINE Alu 6 138 -11 8 905 408 300 160 42 chr13 41991220 41991526 -78292786 + MER2 DNA MER2_type 3 344 -1 8 905 341 284 154 7 chr13 41992475 41992624 -78291688 + MER20 DNA MER1_type 1 171 -48 8 905 324 64 0 0 chr13 41992654 41992701 -78291611 + (CAAA)n Simple_repeat Simple_repeat 3 49 0 8 905 2142 165 31 0 chr13 41993719 41994101 -78290211 + ORR1B1 LTR MaLR 1 394 0 8 905 276 363 14 29 chr13 41994318 41994528 -78289784 + L1M6 LINE L1 1620 1826 -4670 8 905 251 104 21 0 chr13 41994551 41994599 -78289713 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 8 905 447 284 57 0 chr13 41994601 41994742 -78289570 - B1F SINE Alu 0 149 1 8 905 293 300 0 32 chr13 41995847 41995940 -78288372 + MTEa LTR MaLR 248 337 -42 8 905 287 272 70 42 chr13 41996180 41996322 -78287990 - L1MA6 LINE L1 -46 6254 6109 8 905 375 349 111 55 chr13 41996753 41997017 -78287295 + L1MC4a LINE L1 5314 5600 -2282 8 905 494 250 0 0 chr13 41997017 41997121 -78287191 + U6 snRNA snRNA 2 105 -2 8 905 375 349 111 55 chr13 41997121 41997386 -78286926 + L1MC4a LINE L1 5601 5873 -2009 8 905 870 278 56 90 chr13 41997574 41997913 -78286399 + L1MB4 LINE L1 5625 5932 -248 8 905 679 277 182 61 chr13 41997913 41998386 -78285926 - MT2A LTR ERVL 0 533 4 8 905 870 278 56 90 chr13 41998386 41998513 -78285799 + L1MB4 LINE L1 5933 6074 -106 8 905 252 303 0 0 chr13 41998515 41998581 -78285731 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 905 207 0 0 0 chr13 41998602 41998625 -78285687 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 905 496 245 0 26 chr13 41999211 41999324 -78284988 - PB1D10 SINE Alu -2 115 6 8 905 222 318 0 0 chr13 41999269 41999335 -78284977 - B4A SINE B4 -147 145 80 8 905 245 297 191 21 chr13 41999462 41999651 -78284661 - L3 LINE CR1 -107 4382 4162 8 905 339 304 82 67 chr13 42000000 42000134 -78284178 - B1F1 SINE Alu -13 136 1 1 905 202 185 0 44 chr13 42000910 42000978 -78283334 + CT-rich Low_complexity Low_complexity 3 67 0 2 905 345 305 19 28 chr13 42000992 42001100 -78283212 - PB1D7 SINE Alu -11 109 3 3 905 247 253 109 11 chr13 42001347 42001439 -78282873 - L1MB2 LINE L1 -4 6167 6067 4 905 1798 299 53 26 chr13 42001439 42002071 -78282241 - L1MB2 LINE L1 -62 6109 5457 5 905 1857 197 79 14 chr13 42002071 42002271 -78282041 - ORR1C1 LTR MaLR 0 378 166 6 905 1314 20 0 0 chr13 42002271 42002424 -78281888 + (GGGAGA)n Simple_repeat Simple_repeat 2 154 0 7 905 1857 197 79 14 chr13 42002424 42002578 -78281734 - ORR1C1 LTR MaLR -213 165 2 6 905 1798 299 53 26 chr13 42002578 42002712 -78281600 - L1MB2 LINE L1 -715 5456 5322 5 905 289 232 0 0 chr13 42002732 42002788 -78281524 - ID4 SINE ID 0 83 28 8 905 336 331 36 7 chr13 42002829 42002966 -78281346 - B1F SINE Alu -8 141 1 9 905 546 137 0 0 chr13 42003235 42003330 -78280982 + (CA)n Simple_repeat Simple_repeat 2 96 0 1 905 1916 220 101 44 chr13 42003873 42004376 -78279936 - MT2A LTR ERVL 0 533 2 1 905 763 292 77 79 chr13 42004591 42004970 -78279342 - MER82 DNA MER2_type -7 646 269 1 905 506 226 8 34 chr13 42004966 42005085 -78279227 - MTEb LTR MaLR -4 375 260 1 905 517 377 108 21 chr13 42005188 42005660 -78278652 - Zaphod DNA Tip100 -3392 639 127 1 905 182 280 103 81 chr13 42006014 42006150 -78278162 + L4 LINE RTE 165 303 -1726 1 905 291 324 66 9 chr13 42006188 42006294 -78278018 - PB1D7 SINE Alu -8 112 1 1 905 222 37 0 0 chr13 42009457 42009484 -78274828 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 905 5843 60 17 1 chr13 42009900 42010617 -78273695 - L1_Mus3 LINE L1 0 6638 5911 1 905 322 322 46 77 chr13 42010823 42011143 -78273169 - L1M2 LINE L1 -3476 2667 2325 1 905 3635 57 47 9 chr13 42011143 42011607 -78272705 - RLTR45 LTR ERVK 0 482 1 2 905 267 313 52 85 chr13 42011607 42011647 -78272665 - L1M2 LINE L1 -3556 2324 2292 1 905 252 0 0 0 chr13 42011785 42011813 -78272499 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 905 228 316 165 9 chr13 42011893 42012008 -78272304 - B4 SINE B4 -35 257 125 2 905 554 233 46 8 chr13 42012028 42012158 -78272154 + MTD LTR MaLR 10 144 -275 2 905 234 298 58 23 chr13 42012475 42012561 -78271751 - PB1D9 SINE Alu -10 110 22 2 905 2213 108 3 0 chr13 42012542 42012867 -78271445 - RLTR8 LTR ERVK -39 326 1 2 905 330 224 116 31 chr13 42012867 42012903 -78271409 - MER2 DNA MER2_type -100 245 205 2 905 1257 172 22 9 chr13 42012903 42013126 -78271186 + URR1A DNA MER1_type 1 226 0 2 905 330 224 116 31 chr13 42013126 42013207 -78271105 - MER2 DNA MER2_type -141 204 118 2 905 391 235 29 48 chr13 42013211 42013314 -78270998 + PB1D9 SINE Alu 19 119 -1 2 905 261 0 0 0 chr13 42013857 42013886 -78270426 + (A)n Simple_repeat Simple_repeat 1 29 0 2 905 210 71 0 0 chr13 42014628 42014656 -78269656 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 905 3153 146 46 37 chr13 42014738 42015278 -78269034 + RMER1A Other Other 459 1003 -27 3 905 5780 36 1 18 chr13 42015596 42016270 -78268042 + L1Md_F2 LINE L1 5920 6582 0 3 905 243 0 0 0 chr13 42016522 42016549 -78267763 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 905 600 14 0 0 chr13 42017432 42017501 -78266811 + (TTCTC)n Simple_repeat Simple_repeat 2 70 0 3 905 299 136 17 0 chr13 42017503 42017562 -78266750 + CT-rich Low_complexity Low_complexity 2 61 0 3 905 2657 86 59 3 chr13 42019124 42019464 -78264848 - RLTR10D LTR ERVK 0 359 1 3 905 756 282 6 6 chr13 42019503 42019681 -78264631 + B4 SINE B4 1 178 -114 3 905 231 225 141 33 chr13 42019600 42019692 -78264620 + B1_Mur2 SINE Alu 9 110 -39 3 905 653 291 138 32 chr13 42019778 42020460 -78263852 + L1M2 LINE L1 2337 3090 -3053 3 905 3159 284 83 59 chr13 42020473 42020926 -78263386 + L1M2 LINE L1 3386 3827 -2316 3 905 2916 39 33 6 chr13 42020926 42021263 -78263049 - ORR1A1 LTR MaLR 0 346 1 4 905 14051 66 17 22 chr13 42021263 42023063 -78261249 - ORR1A1-int LTR MaLR 0 1792 1 4 905 2851 57 30 3 chr13 42023063 42023400 -78260912 - ORR1A1 LTR MaLR 0 346 1 4 905 3159 282 79 58 chr13 42023400 42024973 -78259339 + L1M2 LINE L1 3828 5470 -830 3 905 557 218 0 0 chr13 42024986 42025087 -78259225 + PB1D10 SINE Alu 15 115 -2 4 905 262 273 182 34 chr13 42025087 42025130 -78259182 + B4A SINE B4 100 265 -27 4 905 307 293 120 16 chr13 42025133 42025317 -78258995 + L1MD LINE L1 2553 2755 -3391 4 905 299 351 91 30 chr13 42025340 42025537 -78258775 + LTR53 LTR ERVL 26 234 -285 4 905 371 305 0 9 chr13 42025614 42025720 -78258592 - PB1D10 SINE Alu -12 105 1 4 905 1012 207 70 5 chr13 42025977 42026176 -78258136 + URR1A DNA MER1_type 1 212 -14 4 905 3588 30 16 130 chr13 42026187 42026679 -78257633 - RLTR10C LTR ERVK 0 436 1 4 905 180 107 34 51 chr13 42027350 42027409 -78256903 + (TTATA)n Simple_repeat Simple_repeat 2 59 0 4 905 327 162 40 81 chr13 42027409 42027620 -78256692 + (TATAA)n Simple_repeat Simple_repeat 1 202 0 4 905 823 269 128 16 chr13 42028365 42028622 -78255690 - B4A SINE B4 -2 290 5 5 905 453 270 9 18 chr13 42029247 42029360 -78254952 - PB1D10 SINE Alu -5 112 1 5 905 786 241 49 29 chr13 42029690 42029895 -78254417 + B3 SINE B2 2 210 -6 5 905 22 35 0 0 chr13 42030796 42030825 -78253487 + AT_rich Low_complexity Low_complexity 1 29 0 5 905 1592 178 34 10 chr13 42030939 42031234 -78253078 + ORR1B1 LTR MaLR 93 394 0 5 905 406 321 150 7 chr13 42031235 42031508 -78252804 - L1MB8 LINE L1 -203 6835 6524 5 905 457 279 46 101 chr13 42031569 42031731 -78252581 - L1MB8 LINE L1 -3642 3692 3538 5 905 1011 168 148 0 chr13 42031731 42031927 -78252385 + URR1A DNA MER1_type 1 225 -1 5 905 457 279 46 101 chr13 42031927 42031984 -78252328 - L1MB8 LINE L1 -3797 3537 3482 5 905 387 0 0 0 chr13 42031984 42032027 -78252285 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 5 905 457 279 46 101 chr13 42032027 42032113 -78252199 - L1MB8 LINE L1 -3853 3481 3403 5 905 284 337 71 77 chr13 42032144 42032482 -78251830 - L1MB8 LINE L1 -5790 1544 1209 5 905 530 300 103 33 chr13 42032515 42032531 -78251781 + L1_Mur3 LINE L1 5321 5339 -541 5 905 372 77 0 0 chr13 42032531 42032583 -78251729 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 905 530 300 103 33 chr13 42032583 42032897 -78251415 + L1_Mur3 LINE L1 5340 5674 -206 5 905 21 0 0 0 chr13 42033211 42033232 -78251080 + AT_rich Low_complexity Low_complexity 1 21 0 6 905 461 256 91 0 chr13 42033257 42033378 -78250934 + B1F1 SINE Alu 9 140 -9 6 905 337 307 30 12 chr13 42034136 42034304 -78250008 + L1ME2z LINE L1 5870 6040 -404 6 905 435 238 30 7 chr13 42036478 42036618 -78247694 - L1_Mur3 LINE L1 -356 5818 5683 6 905 23 0 0 0 chr13 42036702 42036725 -78247587 + AT_rich Low_complexity Low_complexity 1 23 0 6 905 197 156 0 0 chr13 42037031 42037063 -78247249 + L4 LINE RTE 1798 1829 -200 6 905 29 0 0 0 chr13 42037312 42037341 -78246971 + AT_rich Low_complexity Low_complexity 1 29 0 6 905 207 188 0 0 chr13 42038265 42038313 -78245999 + (CATATA)n Simple_repeat Simple_repeat 6 53 0 6 905 292 296 0 53 chr13 42038318 42038393 -78245919 - ID4 SINE ID -11 72 2 6 905 257 0 30 0 chr13 42038563 42038596 -78245716 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 905 252 0 0 0 chr13 42038596 42038623 -78245689 + (GA)n Simple_repeat Simple_repeat 1 28 0 7 905 276 284 0 56 chr13 42039018 42039089 -78245223 + ID4 SINE ID 6 72 -11 7 905 237 163 0 0 chr13 42039097 42039146 -78245166 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 905 234 91 0 0 chr13 42041558 42041591 -78242721 + (T)n Simple_repeat Simple_repeat 1 33 0 7 905 239 171 0 0 chr13 42041719 42041760 -78242552 - Lx8 LINE L1 -334 7139 7099 7 905 365 260 83 66 chr13 42041762 42041943 -78242369 + Lx8 LINE L1 7148 7331 -142 7 905 248 211 17 17 chr13 42041960 42042018 -78242294 + Lx8 LINE L1 7409 7466 -7 7 905 574 272 0 74 chr13 42042048 42042223 -78242089 + B4 SINE B4 125 286 -6 7 905 367 100 29 0 chr13 42042263 42042333 -78241979 + (GGGA)n Simple_repeat Simple_repeat 3 74 0 7 905 183 100 0 0 chr13 42042901 42042931 -78241381 + (CAGAGA)n Simple_repeat Simple_repeat 6 35 0 7 905 198 0 0 0 chr13 42043041 42043063 -78241249 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 7 905 546 326 0 0 chr13 42043175 42043304 -78241008 + B1F1 SINE Alu 2 130 -19 7 905 310 312 49 35 chr13 42043328 42043471 -78240841 + MER2 DNA MER2_type 201 345 0 8 905 444 93 0 0 chr13 42043508 42043583 -78240729 + (TC)n Simple_repeat Simple_repeat 1 75 0 8 905 228 122 0 0 chr13 42043583 42043624 -78240688 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 905 238 26 0 49 chr13 42043950 42043991 -78240321 + (TTTTTA)n Simple_repeat Simple_repeat 4 42 0 8 905 1115 72 0 48 chr13 42044096 42044242 -78240070 + B1_Mus1 SINE Alu 1 139 -9 8 905 261 0 0 0 chr13 42044242 42044271 -78240041 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 8 905 339 328 16 8 chr13 42044423 42044546 -78239766 + GA-rich Low_complexity Low_complexity 2 125 0 8 905 209 180 20 0 chr13 42044568 42044618 -78239694 + G-rich Low_complexity Low_complexity 1 51 0 8 905 400 192 0 49 chr13 42044972 42045054 -78239258 - PB1D10 SINE Alu 0 117 40 8 905 451 283 27 14 chr13 42045164 42045311 -78239001 + B1F SINE Alu 1 149 0 8 905 204 200 0 0 chr13 42045459 42045499 -78238813 + C-rich Low_complexity Low_complexity 1 40 0 9 905 576 0 0 0 chr13 42045610 42045674 -78238638 + (CCCCCT)n Simple_repeat Simple_repeat 5 68 0 9 905 423 56 0 0 chr13 42047063 42047117 -78237195 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 9 905 360 324 9 0 chr13 42047263 42047371 -78236941 + PB1D7 SINE Alu 5 113 -7 9 905 200 35 35 0 chr13 42047394 42047423 -78236889 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 9 905 3035 273 123 28 chr13 42048395 42049530 -78234782 - Lx8 LINE L1 -2 7471 6229 9 905 559 217 13 0 chr13 42050426 42050583 -78233729 + (CA)n Simple_repeat Simple_repeat 2 160 0 9 905 2317 143 21 92 chr13 42050885 42051309 -78233003 - ORR1B1 LTR MaLR 0 394 1 9 905 371 264 0 11 chr13 42051490 42051578 -78232734 - MTEb LTR MaLR -41 338 252 9 905 1073 279 45 19 chr13 42051581 42051895 -78232417 - Lx8 LINE L1 -941 6532 6211 9 905 243 0 0 0 chr13 42051966 42051993 -78232319 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 1 905 814 208 25 19 chr13 42052008 42052170 -78232142 - RSINE1 SINE B4 0 165 3 1 905 1726 286 95 31 chr13 42052257 42052938 -78231374 + Lx8 LINE L1 6731 7455 -18 1 905 258 265 18 0 chr13 42052950 42053116 -78231196 + (CA)n Simple_repeat Simple_repeat 2 170 0 1 905 545 217 6 0 chr13 42053127 42053302 -78231010 + (CA)n Simple_repeat Simple_repeat 2 177 0 1 905 969 121 23 41 chr13 42053756 42053928 -78230384 + ORR1B2 LTR MaLR 1 169 -198 1 905 196 93 0 65 chr13 42053928 42053974 -78230338 + CT-rich Low_complexity Low_complexity 1 43 0 1 905 535 89 316 43 chr13 42053975 42054092 -78230220 - B2_Mm2 SINE B2 0 195 47 1 905 1105 111 79 6 chr13 42054153 42054317 -78229995 - B2_Mm1t SINE B2 -14 179 4 1 905 261 0 0 0 chr13 42054317 42054346 -78229966 + (CCCCG)n Simple_repeat Simple_repeat 1 29 0 1 905 1253 165 14 14 chr13 42054347 42054556 -78229756 + ORR1B2 LTR MaLR 159 367 0 1 905 1238 65 0 0 chr13 42054636 42054791 -78229521 - L1_Mus1 LINE L1 0 6567 6413 1 905 15930 89 3 2 chr13 42054794 42056948 -78227364 - L1_Mm LINE L1 0 5883 3729 1 905 778 70 18 0 chr13 42057087 42057201 -78227111 + (CATATA)n Simple_repeat Simple_repeat 2 117 0 1 905 1153 216 9 9 chr13 42057250 42057465 -78226847 - B3 SINE B2 -1 215 1 1 905 376 255 167 64 chr13 42058142 42058406 -78225906 - B4A SINE B4 -1 291 1 1 905 555 305 91 75 chr13 42058960 42059424 -78224888 + Charlie1b DNA MER1_type 37 507 -16 1 905 1215 92 50 39 chr13 42060159 42060340 -78223972 + B2_Mm1t SINE B2 1 183 -10 1 905 234 0 0 0 chr13 42060340 42060366 -78223946 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1 905 352 281 0 0 chr13 42061103 42061192 -78223120 + PB1D10 SINE Alu 27 115 -2 1 905 6186 70 87 1 chr13 42061336 42062746 -78221566 - L1VL2 LINE L1 -1789 1826 293 1 905 595 113 9 19 chr13 42062759 42062867 -78221445 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 1 905 520 50 12 12 chr13 42063994 42064075 -78220237 + (TTTG)n Simple_repeat Simple_repeat 4 84 0 1 905 226 322 90 79 chr13 42064690 42064879 -78219433 - MER34 LTR ERV1 0 542 352 1 905 541 203 115 43 chr13 42065729 42065868 -78218444 - B1_Mur4 SINE Alu 0 150 2 1 905 413 147 182 189 chr13 42066307 42066354 -78217958 - B1_Mus2 SINE Alu -1 146 113 1 905 1136 68 0 52 chr13 42066354 42066501 -78217811 + B1_Mm SINE Alu 2 141 -6 1 905 207 0 0 0 chr13 42066501 42066524 -78217788 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 905 413 147 182 189 chr13 42066530 42066625 -78217687 - B1_Mus2 SINE Alu -35 112 5 1 905 189 94 0 0 chr13 42067022 42067054 -78217258 + (T)n Simple_repeat Simple_repeat 1 32 0 1 905 280 131 374 9 chr13 42067170 42067277 -78217035 - B2_Mm2 SINE B2 -3 192 47 1 905 1326 118 11 0 chr13 42067308 42067486 -78216826 - B2_Mm1t SINE B2 -13 180 1 1 905 1278 119 118 15 chr13 42067820 42068024 -78216288 - URR1A DNA MER1_type 0 226 2 1 905 230 140 86 48 chr13 42068545 42068650 -78215662 + (TATAA)n Simple_repeat Simple_repeat 1 109 0 1 905 3449 179 64 15 chr13 42068652 42069340 -78214972 - RMER1B Other Other -11 1055 16 1 905 394 240 41 20 chr13 42070688 42070786 -78213526 - MLT1C LTR MaLR -366 101 2 1 905 316 299 98 59 chr13 42071792 42071945 -78212367 + RMER15 LTR ERVL 407 565 -10 1 905 301 262 76 76 chr13 42072245 42072377 -78211935 - MLT1A1 LTR MaLR -2 406 275 1 905 408 329 45 68 chr13 42072807 42073160 -78211152 - ORR1E LTR MaLR -14 365 1 1 905 303 100 28 14 chr13 42073435 42073506 -78210806 + (CCCCG)n Simple_repeat Simple_repeat 3 74 0 1 113 251 302 116 6 chr13 42074078 42074251 -78210061 - L1M2 LINE L1 -786 5357 5166 1 906 225 186 139 0 chr13 42074714 42074757 -78209555 - ID4_ SINE ID -17 66 18 1 906 627 270 18 12 chr13 42075107 42075290 -78209022 + MLT2B4 LTR ERVL 1 184 -370 1 906 3604 41 0 130 chr13 42075293 42075794 -78208518 + RLTR10C LTR ERVK 1 436 0 1 906 28625 13 1 0 chr13 42075794 42078949 -78205363 + MMERVK10C-int LTR ERVK 1 3159 -4422 1 906 1308 31 6 0 chr13 42078949 42079108 -78205204 + B2_Mm1a SINE B2 1 160 -33 1 906 342 0 0 0 chr13 42079108 42079146 -78205166 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 1 906 39884 18 0 12 chr13 42079146 42083637 -78200675 + MMERVK10C-int LTR ERVK 3147 7581 0 1 906 3604 41 0 130 chr13 42083637 42084138 -78200174 + RLTR10C LTR ERVK 1 436 0 1 906 309 324 154 7 chr13 42084160 42084309 -78200003 + MLT2B4 LTR ERVL 211 381 -175 1 906 346 263 63 0 chr13 42084711 42084806 -78199506 + RSINE1 SINE B4 32 132 -33 1 906 381 353 239 7 chr13 42085551 42085835 -78198477 + MER47B DNA MER2_type 69 418 0 1 906 219 156 15 45 chr13 42085884 42085951 -78198361 + GA-rich Low_complexity Low_complexity 2 66 0 1 906 368 286 88 9 chr13 42085956 42086069 -78198243 - B3A SINE B2 -16 182 61 1 906 767 284 121 21 chr13 42086079 42086360 -78197952 - MTD LTR MaLR -14 405 97 1 906 277 146 0 0 chr13 42086366 42086407 -78197905 - B2_Mm2 SINE B2 -153 42 2 1 906 437 314 5 26 chr13 42086605 42086795 -78197517 + L1MA8 LINE L1 5783 5968 -323 1 906 714 276 44 48 chr13 42086795 42087001 -78197311 + B3A SINE B2 1 205 -11 1 906 503 313 63 134 chr13 42087393 42087692 -78196620 + B4A SINE B4 1 278 -14 1 906 180 245 61 0 chr13 42088083 42088132 -78196180 - MIRm SINE MIR 0 276 225 1 906 887 285 82 59 chr13 42088303 42088728 -78195584 + Lx8 LINE L1 7035 7469 -4 1 906 343 315 27 20 chr13 42089228 42089374 -78194938 + MLT1A1 LTR MaLR 262 408 0 1 906 480 18 0 0 chr13 42089884 42089941 -78194371 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 906 645 270 22 0 chr13 42090045 42090182 -78194130 + B1F1 SINE Alu 1 140 -9 1 906 426 20 0 0 chr13 42090619 42090670 -78193642 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1 906 316 275 14 0 chr13 42090897 42090966 -78193346 + ID4 SINE ID 4 73 -10 1 906 34 42 0 0 chr13 42091438 42091486 -78192826 + AT_rich Low_complexity Low_complexity 1 48 0 1 906 385 302 41 16 chr13 42092027 42092148 -78192164 - B1F SINE Alu -17 132 9 1 906 1050 339 93 42 chr13 42092203 42093021 -78191291 - Lx8 LINE L1 -9 7464 6605 1 906 1141 285 67 40 chr13 42093089 42093465 -78190847 - MTD LTR MaLR -16 403 18 1 906 239 291 0 35 chr13 42093614 42093671 -78190641 - MER81 DNA AcHobo -36 78 24 1 906 261 79 95 0 chr13 42093796 42093859 -78190453 + (CAGAGA)n Simple_repeat Simple_repeat 5 73 0 1 906 258 32 0 0 chr13 42094122 42094153 -78190159 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 1 906 213 81 0 51 chr13 42094657 42094696 -78189616 + (TTTG)n Simple_repeat Simple_repeat 1 37 0 1 906 225 108 0 0 chr13 42094697 42094734 -78189578 + (T)n Simple_repeat Simple_repeat 1 37 0 1 906 27 0 0 0 chr13 42094783 42094810 -78189502 + AT_rich Low_complexity Low_complexity 1 27 0 1 906 407 167 11 0 chr13 42095065 42095155 -78189157 + CT-rich Low_complexity Low_complexity 2 92 0 1 906 815 190 0 27 chr13 42095171 42095317 -78188995 - B1_Mur2 SINE Alu 0 149 8 1 906 726 96 0 0 chr13 42095717 42095821 -78188491 + (TTTCC)n Simple_repeat Simple_repeat 2 105 0 1 906 222 37 0 0 chr13 42095821 42095848 -78188464 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 1 906 363 250 17 126 chr13 42096612 42096731 -78187581 + PB1D7 SINE Alu 9 114 -6 1 906 329 232 0 10 chr13 42096749 42096845 -78187467 + GA-rich Low_complexity Low_complexity 2 96 0 1 906 29 0 0 0 chr13 42097183 42097212 -78187100 + AT_rich Low_complexity Low_complexity 1 29 0 1 906 184 337 55 22 chr13 42097251 42097342 -78186970 + MIR3 SINE MIR 90 183 -25 1 906 515 327 178 26 chr13 42097650 42098404 -78185908 + L1MC4a LINE L1 6683 7550 -332 1 906 224 308 0 3 chr13 42098410 42098478 -78185834 + ID2 SINE ID 2 68 -15 1 906 292 258 63 63 chr13 42098523 42098697 -78185615 + L1MC4a LINE L1 7607 7780 -102 1 906 181 298 0 0 chr13 42098854 42098901 -78185411 - L2a LINE L2 -2 3424 3378 1 906 1058 135 0 6 chr13 42098997 42099176 -78185136 + (GAA)n Simple_repeat Simple_repeat 2 179 0 1 906 488 128 0 23 chr13 42099177 42099207 -78185105 + polypurine Low_complexity Low_complexity 1 29 0 1 906 1340 56 6 0 chr13 42099207 42099385 -78184927 + (GAA)n Simple_repeat Simple_repeat 1 179 0 1 906 488 128 0 23 chr13 42099385 42099442 -78184870 + polypurine Low_complexity Low_complexity 30 86 0 1 906 2138 150 53 3 chr13 42100028 42100388 -78183924 + ORR1C1 LTR MaLR 1 378 0 1 906 1031 302 105 32 chr13 42100567 42100947 -78183365 + Lx8 LINE L1 6930 7337 -136 1 906 212 59 29 0 chr13 42101001 42101035 -78183277 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 906 1455 281 114 59 chr13 42101364 42101989 -78182323 + Lx7 LINE L1 6042 6700 -996 1 906 377 312 24 36 chr13 42102052 42102199 -78182113 + Lx8 LINE L1 7195 7341 -132 1 906 1088 124 0 6 chr13 42102199 42102378 -78181934 + (GGA)n Simple_repeat Simple_repeat 3 180 0 1 906 377 312 24 36 chr13 42102378 42102396 -78181916 + Lx8 LINE L1 7342 7358 -115 1 906 548 53 13 0 chr13 42102396 42102472 -78181840 + (GAA)n Simple_repeat Simple_repeat 3 79 0 1 906 228 67 0 0 chr13 42102470 42102500 -78181812 + (CAG)n Simple_repeat Simple_repeat 2 31 0 1 906 715 254 10 81 chr13 42102813 42103010 -78181302 - B3A SINE B2 -14 184 2 1 906 634 278 19 19 chr13 42103594 42103748 -78180564 + B3A SINE B2 1 154 -44 1 906 330 67 0 0 chr13 42103847 42103892 -78180420 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 906 198 367 85 37 chr13 42104644 42104726 -78179586 + L2b LINE L2 3272 3357 -18 1 906 290 299 15 30 chr13 42105193 42105305 -78179007 - PB1D10 SINE Alu -35 114 1 1 906 2821 157 2 5 chr13 42105577 42105999 -78178313 - MTC LTR MaLR 0 421 1 1 906 295 234 196 0 chr13 42106073 42106180 -78178132 + MLT1E1 LTR MaLR 13 140 -514 1 906 765 213 7 21 chr13 42106262 42106406 -78177906 + B1_Mur4 SINE Alu 1 142 -8 1 906 1595 148 59 108 chr13 42107747 42108088 -78176224 + ORR1A4 LTR MaLR 1 324 -5 2 906 513 194 26 44 chr13 42108866 42108979 -78175333 + PB1D10 SINE Alu 7 117 0 2 906 1359 83 33 11 chr13 42108989 42109171 -78175141 + B2_Mm2 SINE B2 2 187 -8 2 906 472 241 47 29 chr13 42109257 42109428 -78174884 - L1MB2 LINE L1 -116 6055 5882 2 906 181 365 135 0 chr13 42109624 42109720 -78174592 - MIR SINE MIR -152 110 2 2 906 207 0 0 0 chr13 42110491 42110514 -78173798 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 2 906 859 258 114 57 chr13 42112418 42112751 -78171561 - MTEa LTR MaLR -2 377 26 2 906 210 71 0 0 chr13 42112946 42112974 -78171338 + (T)n Simple_repeat Simple_repeat 1 28 0 2 906 4271 36 0 2 chr13 42112988 42113483 -78170829 - L1Md_F2 LINE L1 -11 6571 6078 2 906 354 91 0 0 chr13 42113801 42113856 -78170456 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 906 283 324 55 16 chr13 42115162 42115318 -78168994 - MTEa LTR MaLR -9 370 197 2 906 385 188 59 50 chr13 42115753 42115854 -78168458 + B1F SINE Alu 32 133 -16 2 906 297 0 0 0 chr13 42115854 42115887 -78168425 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 2 906 407 19 19 0 chr13 42115918 42115970 -78168342 + (TAAA)n Simple_repeat Simple_repeat 1 53 0 2 906 235 306 0 45 chr13 42116422 42116511 -78167801 + (TATG)n Simple_repeat Simple_repeat 2 86 0 2 906 458 257 0 6 chr13 42116533 42116709 -78167603 + (TG)n Simple_repeat Simple_repeat 1 175 0 2 906 435 245 29 19 chr13 42116782 42116886 -78167426 - RSINE1 SINE B4 -59 106 2 2 906 498 17 0 0 chr13 42117130 42117189 -78167123 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 906 649 160 98 8 chr13 42117189 42117321 -78166991 - URR1A DNA MER1_type -2 224 81 2 906 862 195 22 89 chr13 42117925 42118150 -78166162 - B3 SINE B2 -5 211 2 2 906 32 0 0 0 chr13 42118165 42118197 -78166115 + AT_rich Low_complexity Low_complexity 1 32 0 2 906 259 315 14 0 chr13 42118840 42118913 -78165399 + ID4_ SINE ID 4 77 -6 2 906 519 202 17 23 chr13 42118924 42119101 -78165211 + GA-rich Low_complexity Low_complexity 3 178 0 2 906 1000 130 0 22 chr13 42119103 42119175 -78165137 + polypurine Low_complexity Low_complexity 2 73 0 2 906 1296 84 0 0 chr13 42119175 42119354 -78164958 + (GAA)n Simple_repeat Simple_repeat 1 179 0 2 906 1000 130 0 22 chr13 42119354 42119403 -78164909 + polypurine Low_complexity Low_complexity 74 121 0 2 906 1212 106 0 0 chr13 42119403 42119582 -78164730 + (GAA)n Simple_repeat Simple_repeat 1 179 0 2 906 1000 130 0 22 chr13 42119582 42119640 -78164672 + polypurine Low_complexity Low_complexity 122 178 0 2 906 1431 65 0 0 chr13 42119640 42119962 -78164350 + (GAA)n Simple_repeat Simple_repeat 1 322 0 2 906 315 0 0 0 chr13 42119962 42119997 -78164315 + (CAG)n Simple_repeat Simple_repeat 1 35 0 2 906 402 339 112 8 chr13 42120331 42120833 -78163479 + Arthur1 DNA Tip100 3080 3633 -314 2 906 980 77 8 0 chr13 42120840 42120970 -78163342 + B1_Mus1 SINE Alu 1 131 -17 2 906 3213 88 2 6 chr13 42121592 42122060 -78162252 - MT2C_Mm LTR ERVL -4 471 6 2 906 271 246 0 0 chr13 42122288 42122345 -78161967 + GA-rich Low_complexity Low_complexity 4 60 0 2 906 276 298 88 24 chr13 42122513 42122742 -78161570 - L1M3 LINE L1 -2286 3854 3610 2 906 25 0 0 0 chr13 42123086 42123111 -78161201 + AT_rich Low_complexity Low_complexity 1 25 0 2 906 521 283 32 13 chr13 42123134 42123288 -78161024 - RSINE1 SINE B4 -3 162 6 2 906 969 291 107 92 chr13 42123439 42123687 -78160625 - L1MA6 LINE L1 -20 6280 6016 2 906 1187 231 107 74 chr13 42123687 42124052 -78160260 + MTE2b LTR MaLR 3 379 0 2 906 969 291 107 92 chr13 42124052 42124312 -78160000 - L1MA6 LINE L1 -285 6015 5773 2 906 246 32 0 0 chr13 42124312 42124343 -78159969 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 906 969 291 107 92 chr13 42124343 42124593 -78159719 - L1MA6 LINE L1 -528 5772 5511 2 906 644 301 77 0 chr13 42124627 42124810 -78159502 + B4A SINE B4 88 284 -8 2 906 566 333 82 48 chr13 42124923 42125083 -78159229 - Charlie2b DNA MER1_type -210 2572 2414 2 906 180 0 0 0 chr13 42125083 42125103 -78159209 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2 906 566 333 82 48 chr13 42125103 42125488 -78158824 - Charlie2b DNA MER1_type -369 2413 2008 2 906 1297 138 5 0 chr13 42125685 42125874 -78158438 - B2_Mm1t SINE B2 -3 190 1 2 906 400 192 28 92 chr13 42126769 42126878 -78157434 + B1_Mus1 SINE Alu 39 140 -8 2 906 225 196 137 0 chr13 42126923 42126974 -78157338 + Tigger5 DNA MER2_type 1 58 -2348 2 906 357 309 9 9 chr13 42127452 42127563 -78156749 - PB1D10 SINE Alu -1 116 6 2 906 230 388 10 0 chr13 42127478 42127576 -78156736 - ID_B1 SINE B4 -52 172 74 2 906 202 263 0 38 chr13 42127612 42127691 -78156621 + T-rich Low_complexity Low_complexity 1 76 0 2 906 249 244 86 58 chr13 42127956 42128095 -78156217 - L1M5 LINE L1 -2628 3518 3376 2 906 2440 158 21 19 chr13 42128425 42128844 -78155468 + MTC LTR MaLR 1 420 -1 2 906 198 91 0 0 chr13 42130278 42130311 -78154001 + (T)n Simple_repeat Simple_repeat 1 33 0 2 906 186 103 0 0 chr13 42131171 42131200 -78153112 + (TGGGGG)n Simple_repeat Simple_repeat 3 31 0 2 906 369 0 0 0 chr13 42132935 42132976 -78151336 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 906 254 159 23 0 chr13 42132984 42133028 -78151284 + HAL1 LINE L1 655 699 -1808 2 906 3592 65 119 0 chr13 42133409 42133887 -78150425 + L1_Mus1 LINE L1 6033 6567 0 2 906 552 68 0 0 chr13 42133892 42133965 -78150347 + (GAA)n Simple_repeat Simple_repeat 2 74 0 2 906 729 303 76 31 chr13 42134214 42134571 -78149741 + HAL1 LINE L1 1391 1763 -744 2 906 281 305 0 31 chr13 42134666 42134764 -78149548 + ID_B1 SINE B4 80 174 -50 2 906 376 262 0 28 chr13 42134679 42134785 -78149527 + PB1D10 SINE Alu 11 113 -4 2 906 872 130 14 0 chr13 42135305 42135451 -78148861 + URR1A DNA MER1_type 79 226 0 2 906 946 311 11 4 chr13 42135760 42136034 -78148278 + B4A SINE B4 1 276 -16 2 906 426 20 0 0 chr13 42136084 42136135 -78148177 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 906 240 278 71 20 chr13 42136163 42136262 -78148050 - L1MC2 LINE L1 -139 6205 6102 2 906 261 83 0 0 chr13 42136413 42136449 -78147863 + (CAG)n Simple_repeat Simple_repeat 1 36 0 2 906 311 277 36 0 chr13 42137695 42137778 -78146534 + B3A SINE B2 1 86 -112 2 906 414 0 0 0 chr13 42137801 42137847 -78146465 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 906 372 215 37 25 chr13 42138296 42138377 -78145935 - ID4 SINE ID -1 82 1 2 906 729 181 68 0 chr13 42140123 42140256 -78144056 - B1_Mur4 SINE Alu -8 142 1 2 906 188 247 107 27 chr13 42140744 42140819 -78143493 - L2c LINE L2 0 3387 3307 2 906 665 178 0 85 chr13 42140884 42141025 -78143287 - B1_Mur4 SINE Alu -14 136 8 2 906 532 211 153 8 chr13 42141315 42141439 -78142873 + B1_Mur3 SINE Alu 6 147 -2 2 906 442 170 112 11 chr13 42141596 42141685 -78142627 + PB1D9 SINE Alu 23 120 0 2 906 517 242 6 31 chr13 42141987 42142149 -78142163 - ORR1E LTR MaLR -201 158 1 2 906 408 375 6 0 chr13 42142214 42142382 -78141930 + MLT1B LTR MaLR 197 365 -25 2 906 288 0 0 0 chr13 42144703 42144735 -78139577 + (T)n Simple_repeat Simple_repeat 1 32 0 2 906 189 0 0 0 chr13 42146982 42147003 -78137309 + (TCC)n Simple_repeat Simple_repeat 1 21 0 2 906 23 0 0 0 chr13 42147102 42147125 -78137187 + GC_rich Low_complexity Low_complexity 1 23 0 2 906 205 29 0 56 chr13 42147182 42147218 -78137094 + (CCCCG)n Simple_repeat Simple_repeat 5 38 0 2 906 198 0 0 0 chr13 42147267 42147289 -78137023 + (CGGG)n Simple_repeat Simple_repeat 3 24 0 2 906 28 48 0 0 chr13 42147321 42147363 -78136949 + GC_rich Low_complexity Low_complexity 1 42 0 2 906 220 253 0 13 chr13 42147583 42147659 -78136653 + G-rich Low_complexity Low_complexity 5 79 0 2 906 201 39 0 0 chr13 42148169 42148195 -78136117 + (TCC)n Simple_repeat Simple_repeat 2 27 0 2 906 313 280 105 52 chr13 42149018 42149267 -78135045 - MIR SINE MIR -6 256 1 2 906 221 28 83 0 chr13 42149376 42149412 -78134900 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 906 615 225 112 92 chr13 42149811 42150007 -78134305 + RMER30 DNA MER1_type 2 201 -1 2 906 451 274 9 0 chr13 42150046 42150159 -78134153 - MLT1I LTR MaLR -6 405 292 2 906 270 333 74 49 chr13 42151756 42152040 -78132272 + B4 SINE B4 2 292 0 2 906 2184 241 97 67 chr13 42152298 42152442 -78131870 - RCHARR1 DNA MER1_type -1 973 846 2 906 723 249 40 0 chr13 42152442 42152619 -78131693 - B3A SINE B2 -14 184 1 2 906 2184 241 97 67 chr13 42152619 42153278 -78131034 - RCHARR1 DNA MER1_type -129 845 118 2 906 2215 164 76 63 chr13 42153278 42153832 -78130480 - RLTR31_Mm LTR ERVK 0 561 1 2 906 2184 241 97 67 chr13 42153832 42153928 -78130384 - RCHARR1 DNA MER1_type -857 117 46 2 906 217 212 49 12 chr13 42154325 42154406 -78129906 + (TTTA)n Simple_repeat Simple_repeat 2 85 0 2 906 186 118 0 0 chr13 42154605 42154639 -78129673 + (TGGGGG)n Simple_repeat Simple_repeat 2 35 0 2 906 324 260 61 30 chr13 42155512 42155611 -78128701 + PB1 SINE Alu 23 124 -3 2 906 290 260 39 20 chr13 42155817 42155919 -78128393 - BC1_Mm scRNA scRNA -47 105 2 2 906 408 111 0 0 chr13 42156517 42156580 -78127732 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 906 252 0 0 0 chr13 42157075 42157103 -78127209 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 906 186 43 0 0 chr13 42158070 42158093 -78126219 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 2 906 2031 194 96 100 chr13 42159074 42159676 -78124636 - Lx7 LINE L1 -276 7420 6821 2 906 21 0 0 0 chr13 42160567 42160588 -78123724 + AT_rich Low_complexity Low_complexity 1 21 0 2 906 204 40 0 0 chr13 42161347 42161372 -78122940 + (TTG)n Simple_repeat Simple_repeat 1 25 0 2 906 611 254 8 0 chr13 42161372 42161506 -78122806 - B1F2 SINE Alu -13 136 2 3 906 331 243 144 22 chr13 42162352 42162491 -78121821 - MIR SINE MIR -29 233 78 3 906 248 282 146 43 chr13 42164823 42165008 -78119304 - L1ME1 LINE L1 -178 6001 5798 3 906 216 0 0 0 chr13 42165008 42165032 -78119280 + (T)n Simple_repeat Simple_repeat 1 24 0 3 906 368 327 0 0 chr13 42166126 42166227 -78118085 - RSINE1 SINE B4 -45 120 20 3 906 242 316 121 50 chr13 42166522 42166662 -78117650 - MER2 DNA MER2_type -59 286 137 3 906 334 277 31 75 chr13 42168137 42168301 -78116011 - L1M4b LINE L1 -730 2988 2835 3 906 372 176 0 0 chr13 42168302 42168404 -78115908 + (TG)n Simple_repeat Simple_repeat 1 102 0 3 906 422 237 173 0 chr13 42168436 42168575 -78115737 - RSINE1 SINE B4 0 165 3 3 906 206 62 31 0 chr13 42170423 42170455 -78113857 + (TATG)n Simple_repeat Simple_repeat 1 33 0 3 906 570 212 0 50 chr13 42170536 42170655 -78113657 - PB1D9 SINE Alu -7 113 1 3 906 1417 62 6 0 chr13 42171344 42171521 -78112791 + B2_Mm1t SINE B2 2 179 -14 3 906 562 250 32 49 chr13 42171655 42171840 -78112472 - B3A SINE B2 -1 197 16 3 906 516 226 21 70 chr13 42172134 42172277 -78112035 - ORR1D2-int LTR MaLR -1216 154 16 3 906 288 241 45 11 chr13 42172258 42172346 -78111966 - ORR1D2-int LTR MaLR -1166 92 2 3 906 1448 240 33 22 chr13 42172351 42172713 -78111599 - ORR1D2 LTR MaLR -4 366 1 3 906 537 176 0 0 chr13 42172915 42173023 -78111289 + (CA)n Simple_repeat Simple_repeat 1 108 0 3 906 392 276 92 7 chr13 42173881 42174023 -78110289 + Charlie4a DNA MER1_type 308 461 -47 3 906 207 0 0 0 chr13 42174921 42174944 -78109368 + (T)n Simple_repeat Simple_repeat 1 23 0 3 906 650 208 131 42 chr13 42175133 42175324 -78108988 - B3 SINE B2 0 216 9 3 906 510 228 95 17 chr13 42175753 42175817 -78108495 - RLTR20A2 LTR ERVK -28 540 466 3 906 441 0 0 0 chr13 42175817 42175866 -78108446 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 906 510 215 68 14 chr13 42175866 42175974 -78108338 - RLTR20A2 LTR ERVK -98 480 412 3 906 503 185 179 16 chr13 42175974 42176126 -78108186 - RLTR20A2 LTR ERVK -387 164 1 3 906 257 251 66 92 chr13 42176673 42176901 -78107411 + L1ME3 LINE L1 5730 5951 -211 3 906 255 31 0 0 chr13 42177170 42177202 -78107110 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 906 837 243 102 50 chr13 42177860 42178163 -78106149 - Lx8 LINE L1 -73 7400 7082 3 906 316 272 12 24 chr13 42178348 42178431 -78105881 - ID4_ SINE ID -1 82 1 3 906 280 284 109 29 chr13 42178581 42178719 -78105593 - MER106B DNA MER1_type -910 149 1 3 906 207 0 0 0 chr13 42178890 42178913 -78105399 + (T)n Simple_repeat Simple_repeat 1 23 0 3 906 1405 82 0 49 chr13 42178919 42179124 -78105188 - B2_Mm2 SINE B2 0 195 1 3 906 223 213 21 0 chr13 42179663 42179710 -78104602 + (TATG)n Simple_repeat Simple_repeat 1 48 0 3 906 441 279 62 25 chr13 42182328 42182490 -78101822 - B4 SINE B4 -123 169 2 3 906 183 129 0 0 chr13 42182595 42182626 -78101686 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 3 906 317 309 108 42 chr13 42182661 42182921 -78101391 - B4 SINE B4 -14 278 2 3 906 180 0 0 0 chr13 42185416 42185436 -78098876 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 906 362 252 137 11 chr13 42187075 42187207 -78097105 + PB1D10 SINE Alu 1 148 -1 3 906 284 244 11 0 chr13 42187360 42187450 -78096862 + (TG)n Simple_repeat Simple_repeat 2 92 0 3 906 37 23 0 0 chr13 42188428 42188472 -78095840 + AT_rich Low_complexity Low_complexity 1 44 0 3 906 259 202 19 33 chr13 42188616 42188686 -78095626 - B1F SINE Alu -9 140 48 3 906 594 39 0 0 chr13 42188807 42188884 -78095428 + (TC)n Simple_repeat Simple_repeat 2 78 0 3 906 1045 52 97 0 chr13 42189641 42189775 -78094537 - B1_Mm SINE Alu 0 147 1 3 906 216 244 0 111 chr13 42190053 42190251 -78094061 + (CTGTG)n Simple_repeat Simple_repeat 3 178 0 3 906 362 197 0 110 chr13 42190682 42190882 -78093430 + (CTGTG)n Simple_repeat Simple_repeat 1 178 0 3 906 655 270 41 6 chr13 42191061 42191254 -78093058 - B3A SINE B2 -5 211 15 3 906 228 261 0 0 chr13 42192495 42192587 -78091725 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 906 23 0 0 0 chr13 42192828 42192851 -78091461 + AT_rich Low_complexity Low_complexity 1 23 0 3 906 543 284 102 21 chr13 42193337 42193573 -78090739 + B4A SINE B4 4 288 -4 3 906 411 78 0 0 chr13 42193577 42193641 -78090671 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 906 271 316 13 0 chr13 42193697 42193773 -78090539 - PB1D10 SINE Alu -15 102 26 3 906 501 127 0 0 chr13 42193861 42193940 -78090372 + (TCTG)n Simple_repeat Simple_repeat 2 80 0 3 906 1273 178 9 5 chr13 42193958 42194172 -78090140 + B3 SINE B2 2 216 0 3 906 419 63 16 0 chr13 42194740 42194803 -78089509 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 906 385 268 108 16 chr13 42194917 42195103 -78089209 + L1MC1 LINE L1 5853 6055 -278 3 906 348 235 103 73 chr13 42195158 42195323 -78088989 + L1MC1 LINE L1 6149 6318 -15 3 906 26 74 0 0 chr13 42195691 42195745 -78088567 + AT_rich Low_complexity Low_complexity 1 54 0 3 906 221 312 204 0 chr13 42196730 42196823 -78087489 - L2c LINE L2 -7 3380 3269 3 906 232 246 75 30 chr13 42197489 42197556 -78086756 + L2a LINE L2 3357 3426 0 3 906 399 239 139 36 chr13 42199334 42199431 -78084881 - B3A SINE B2 -16 182 71 3 906 447 19 0 0 chr13 42199431 42199483 -78084829 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 906 399 239 139 36 chr13 42199483 42199550 -78084762 - B3A SINE B2 -128 70 1 3 906 23 54 0 0 chr13 42200276 42200313 -78083999 + AT_rich Low_complexity Low_complexity 1 37 0 3 906 4942 106 109 16 chr13 42200313 42201083 -78083229 - Lx4A LINE L1 0 7058 6217 3 906 4445 90 35 5 chr13 42201086 42201971 -78082341 + Lx4A LINE L1 5251 6159 -899 3 906 477 0 0 0 chr13 42201971 42202024 -78082288 + (TGG)n Simple_repeat Simple_repeat 3 55 0 3 906 4144 92 42 14 chr13 42202024 42202086 -78082226 + Lx4A LINE L1 6160 6222 -836 3 906 255 331 81 24 chr13 42202282 42202406 -78081906 - MIRb SINE MIR -17 251 121 3 906 1385 72 5 16 chr13 42202656 42202841 -78081471 - B2_Mm1t SINE B2 -9 184 2 3 906 607 293 26 57 chr13 42203011 42203203 -78081109 - MER20 DNA MER1_type -31 188 3 3 907 234 0 0 0 chr13 42205528 42205554 -78078758 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 907 873 276 130 32 chr13 42206151 42206496 -78077816 + MTEa LTR MaLR 1 379 0 3 907 528 265 70 15 chr13 42207169 42207368 -78076944 - Tigger7 DNA MER2_type -6 2485 2276 3 907 230 263 200 0 chr13 42207366 42207461 -78076851 - Tigger7 DNA MER2_type -2373 118 5 3 907 293 276 11 65 chr13 42208174 42208267 -78076045 + B4 SINE B4 50 137 -155 3 907 627 48 0 0 chr13 42208396 42208479 -78075833 + (CA)n Simple_repeat Simple_repeat 2 84 0 3 907 513 47 0 0 chr13 42209665 42209729 -78074583 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 907 702 151 0 19 chr13 42209840 42209948 -78074364 - Lx5 LINE L1 -192 6858 6753 3 907 724 241 19 25 chr13 42209949 42210111 -78074201 + Lx5 LINE L1 6872 7032 -18 3 907 306 0 0 0 chr13 42210111 42210145 -78074167 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 3 907 670 179 0 12 chr13 42210557 42210727 -78073585 + CT-rich Low_complexity Low_complexity 3 170 0 3 907 241 267 242 62 chr13 42210881 42211009 -78073303 - MER5B DNA MER1_type -6 172 22 3 907 223 143 0 0 chr13 42211315 42211350 -78072962 + PB1D7 SINE Alu 72 106 -14 3 907 567 0 0 0 chr13 42211350 42211413 -78072899 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 3 907 195 42 0 0 chr13 42212673 42212697 -78071615 + (TTAA)n Simple_repeat Simple_repeat 2 25 0 3 907 406 264 20 59 chr13 42212714 42212867 -78071445 + L1_Rod LINE L1 5416 5626 -665 3 907 622 282 24 6 chr13 42214419 42214583 -78069729 - MTEa LTR MaLR -200 179 13 3 907 354 240 80 55 chr13 42215742 42215905 -78068407 - L1MA6 LINE L1 0 6300 6134 3 907 260 83 21 0 chr13 42215993 42216041 -78068271 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 3 907 546 91 0 0 chr13 42216042 42216119 -78068193 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 907 954 26 0 0 chr13 42216119 42216236 -78068076 + (TG)n Simple_repeat Simple_repeat 1 117 0 3 907 293 177 258 0 chr13 42216991 42217053 -78067259 - ID4_ SINE ID -4 79 2 3 907 396 0 0 0 chr13 42217212 42217256 -78067056 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 3 907 308 192 98 41 chr13 42217272 42217374 -78066938 - B2_Mm2 SINE B2 -82 116 4 3 907 427 257 226 34 chr13 42218089 42218266 -78066046 + ID_B1 SINE B4 1 211 -13 3 907 26163 63 7 5 chr13 42219370 42225666 -78058646 - L1Md_F2 LINE L1 -1 6584 193 3 907 794 117 24 12 chr13 42225767 42225932 -78058380 + CT-rich Low_complexity Low_complexity 3 169 0 3 907 803 185 208 0 chr13 42227305 42227483 -78056829 + B3 SINE B2 2 216 0 3 907 357 24 0 0 chr13 42228420 42228462 -78055850 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 907 537 241 12 65 chr13 42229041 42229210 -78055102 + RSINE1 SINE B4 6 165 0 3 907 180 0 0 0 chr13 42229325 42229345 -78054967 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 3 907 426 114 200 16 chr13 42229348 42229473 -78054839 - RMER17B LTR ERVK -499 459 312 3 907 581 271 91 61 chr13 42229666 42229996 -78054316 - L1MA5A LINE L1 -279 6018 5679 3 907 22 0 0 0 chr13 42230234 42230256 -78054056 + AT_rich Low_complexity Low_complexity 1 22 0 3 907 254 320 26 0 chr13 42230446 42230524 -78053788 - ID4_ SINE ID -3 80 1 3 907 213 299 7 140 chr13 42230816 42230952 -78053360 + RSINE1 SINE B4 4 121 -44 3 907 6407 81 11 3 chr13 42232152 42233675 -78050637 + L1VL2 LINE L1 292 1826 -1789 3 907 266 276 0 0 chr13 42233819 42233895 -78050417 - PB1D10 SINE Alu -2 115 40 3 907 936 220 55 5 chr13 42236145 42236346 -78047966 - B3 SINE B2 -3 213 3 3 907 1356 58 40 11 chr13 42237004 42237179 -78047133 + B2_Mm2 SINE B2 2 181 -14 3 907 341 22 0 0 chr13 42237214 42237259 -78047053 + B2_Mm1t SINE B2 127 171 -22 3 907 374 51 0 0 chr13 42237298 42237357 -78046955 + B2_Mm1t SINE B2 127 185 -8 4 907 21 36 0 0 chr13 42239356 42239384 -78044928 + AT_rich Low_complexity Low_complexity 1 28 0 4 907 800 152 14 14 chr13 42239384 42239524 -78044788 - B1_Mur1 SINE Alu 0 149 10 4 907 579 15 0 0 chr13 42240306 42240374 -78043938 + (CTTTG)n Simple_repeat Simple_repeat 2 69 0 4 907 237 271 84 26 chr13 42241340 42241495 -78042817 - L1MEg LINE L1 -5467 617 454 4 907 22 0 0 0 chr13 42241930 42241952 -78042360 + AT_rich Low_complexity Low_complexity 1 22 0 4 907 433 274 31 7 chr13 42243105 42243285 -78041027 - L1M5 LINE L1 -3195 2945 2760 4 907 23 0 0 0 chr13 42243363 42243386 -78040926 + AT_rich Low_complexity Low_complexity 1 23 0 4 907 241 277 31 0 chr13 42243392 42243457 -78040855 - tRNA-Ala-GCY_ tRNA tRNA -7 68 2 4 907 338 289 103 56 chr13 42244175 42244388 -78039924 - MLT1D LTR MaLR -404 223 1 4 907 481 287 61 113 chr13 42244618 42244830 -78039482 - B4A SINE B4 0 292 92 4 907 189 0 0 0 chr13 42244832 42244853 -78039459 + (TCCCC)n Simple_repeat Simple_repeat 5 25 0 4 907 200 216 0 0 chr13 42244857 42244894 -78039418 + CT-rich Low_complexity Low_complexity 4 40 0 4 907 267 103 0 0 chr13 42246922 42246961 -78037351 + (CATA)n Simple_repeat Simple_repeat 2 40 0 4 907 862 285 20 40 chr13 42246990 42247286 -78037026 + B4A SINE B4 3 292 0 4 907 278 327 12 24 chr13 42247311 42247506 -78036806 + (CA)n Simple_repeat Simple_repeat 1 192 0 4 907 238 296 12 58 chr13 42248004 42248090 -78036222 + B4A SINE B4 82 163 -129 4 907 427 220 30 0 chr13 42248015 42248115 -78036197 + PB1D10 SINE Alu 8 110 -7 4 907 31 26 0 0 chr13 42260224 42260262 -78024050 + AT_rich Low_complexity Low_complexity 1 38 0 4 907 270 0 0 0 chr13 42261425 42261455 -78022857 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 4 907 228 194 32 16 chr13 42263774 42263837 -78020475 + ID4_ SINE ID 2 65 -18 4 907 1224 35 14 0 chr13 42264784 42264928 -78019384 - B1_Mus1 SINE Alu 0 148 3 4 907 324 175 0 0 chr13 42265462 42265525 -78018787 + CT-rich Low_complexity Low_complexity 3 65 0 4 907 502 152 84 19 chr13 42265595 42265702 -78018610 - B1_Mus1 SINE Alu 0 148 35 4 907 696 0 0 0 chr13 42265741 42265824 -78018488 - L1Md_T LINE L1 0 6582 6500 4 907 284 48 24 0 chr13 42265940 42265982 -78018330 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 907 251 287 125 51 chr13 42265984 42266160 -78018152 - B4A SINE B4 -16 276 88 4 907 1935 178 53 10 chr13 42266161 42266558 -78017754 - MTD LTR MaLR 0 419 6 4 907 661 251 68 0 chr13 42267139 42267302 -78017010 + B3A SINE B2 1 174 -24 4 907 242 296 44 36 chr13 42267472 42267609 -78016703 + L2 LINE L2 2912 3049 -370 4 907 250 336 60 8 chr13 42268149 42268266 -78016046 + PB1 SINE Alu 5 127 0 4 907 417 248 105 0 chr13 42268392 42268497 -78015815 + B4A SINE B4 4 119 -173 4 907 564 116 0 0 chr13 42268583 42268669 -78015643 + (CATA)n Simple_repeat Simple_repeat 1 86 0 4 907 426 243 117 2 chr13 42269169 42269323 -78014989 - B3A SINE B2 -13 203 28 4 907 3399 28 8 0 chr13 42271098 42271491 -78012821 - MTA_Mm LTR MaLR 0 396 1 4 907 227 184 20 0 chr13 42271601 42271650 -78012662 - Cheshire DNA MER1_type -2 2418 2369 4 907 585 212 187 16 chr13 42271945 42272127 -78012185 + B3 SINE B2 2 214 -2 4 907 212 23 43 65 chr13 42272152 42272198 -78012114 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 4 907 351 281 252 30 chr13 42273607 42274124 -78010188 - L1MD3 LINE L1 -19 7976 7236 4 907 412 236 9 62 chr13 42274379 42274492 -78009820 - L1MD3 LINE L1 -1176 6819 6713 4 907 21 0 0 0 chr13 42275270 42275291 -78009021 + AT_rich Low_complexity Low_complexity 1 21 0 4 907 620 293 38 25 chr13 42275663 42275901 -78008411 + B4A SINE B4 9 249 -43 4 907 207 184 0 0 chr13 42276862 42276900 -78007412 + (ATG)n Simple_repeat Simple_repeat 3 40 0 4 907 330 26 0 0 chr13 42281933 42281972 -78002340 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 907 1565 68 0 0 chr13 42281972 42282163 -78002149 - B2_Mm1a SINE B2 -1 192 2 4 907 843 154 196 5 chr13 42282860 42283049 -78001263 + URR1B DNA MER1_type 1 225 0 4 907 639 0 0 0 chr13 42283529 42283600 -78000712 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 4 907 1480 39 66 0 chr13 42285447 42285628 -77998684 + B2_Mm2 SINE B2 3 195 0 4 907 771 262 70 60 chr13 42285728 42285934 -77998378 + B4A SINE B4 1 215 -77 4 907 1155 63 7 0 chr13 42285934 42286077 -77998235 + B1_Mus2 SINE Alu 2 145 -2 4 907 228 35 0 0 chr13 42286077 42286106 -77998206 + (GA)n Simple_repeat Simple_repeat 2 30 0 4 907 771 262 70 60 chr13 42286106 42286182 -77998130 + B4A SINE B4 216 286 -6 4 907 270 0 0 0 chr13 42287195 42287225 -77997087 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 907 186 71 0 0 chr13 42288059 42288087 -77996225 + (TTAAA)n Simple_repeat Simple_repeat 3 30 0 4 907 735 62 0 0 chr13 42289301 42289398 -77994914 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 907 936 219 113 84 chr13 42289472 42289827 -77994485 - ORR1D2 LTR MaLR -5 365 1 4 907 1083 247 42 11 chr13 42290038 42290324 -77993988 - MTD LTR MaLR -124 295 1 4 907 1211 48 0 7 chr13 42290614 42290761 -77993551 + B1_Mus2 SINE Alu 1 146 -1 4 907 543 31 0 0 chr13 42290761 42290826 -77993486 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 907 1220 76 12 0 chr13 42291496 42291668 -77992644 + (TTCTCC)n Simple_repeat Simple_repeat 5 178 0 4 907 427 143 33 0 chr13 42291670 42291761 -77992551 + CT-rich Low_complexity Low_complexity 3 96 0 4 907 23 54 0 0 chr13 42291991 42292028 -77992284 + AT_rich Low_complexity Low_complexity 1 37 0 4 907 364 236 70 16 chr13 42292390 42292519 -77991793 - MLT1A1 LTR MaLR -2 406 271 4 907 704 153 14 35 chr13 42293163 42293305 -77991007 - B2_Mm2 SINE B2 -21 174 36 4 907 261 0 0 0 chr13 42294004 42294033 -77990279 + (TC)n Simple_repeat Simple_repeat 1 29 0 4 907 2044 95 65 30 chr13 42294771 42295165 -77989147 - RMER17A2 LTR ERVK -453 453 1 4 907 211 191 0 31 chr13 42295178 42295227 -77989085 + CT-rich Low_complexity Low_complexity 17 65 0 4 907 2614 170 23 149 chr13 42295227 42295926 -77988386 + RMER19C LTR ERVK 1 611 0 4 907 211 191 0 31 chr13 42295926 42295941 -77988371 + polypyrimidine Low_complexity Low_complexity 3 16 0 4 907 1256 34 0 0 chr13 42296101 42296248 -77988064 + B1_Mus2 SINE Alu 1 147 0 4 907 441 246 327 56 chr13 42297246 42297475 -77986837 + B4A SINE B4 2 292 0 4 907 982 186 199 148 chr13 42298636 42299110 -77985202 + MT2A LTR ERVL 2 596 -5 4 907 25 51 0 0 chr13 42299206 42299245 -77985067 + AT_rich Low_complexity Low_complexity 1 39 0 4 907 266 191 16 16 chr13 42299338 42299402 -77984910 - MTE2b LTR MaLR 0 379 316 4 907 1157 81 0 6 chr13 42299405 42299567 -77984745 - B2_Mm2 SINE B2 -34 161 1 4 907 228 277 108 0 chr13 42299567 42299630 -77984682 - MTD LTR MaLR -53 368 299 4 907 826 127 7 27 chr13 42299635 42299781 -77984531 - B1_Mur3 SINE Alu 0 149 7 4 907 544 285 34 23 chr13 42299788 42299964 -77984348 - MTD LTR MaLR -125 294 117 4 907 1593 226 86 0 chr13 42299966 42300338 -77983974 - MTD LTR MaLR -1 418 15 4 907 234 0 0 0 chr13 42301036 42301062 -77983250 + (TATG)n Simple_repeat Simple_repeat 2 27 0 4 907 315 0 0 0 chr13 42301062 42301097 -77983215 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 907 489 299 22 0 chr13 42301100 42301234 -77983078 - B1F SINE Alu -7 142 6 4 907 612 0 0 0 chr13 42301424 42301492 -77982820 + (CAAAC)n Simple_repeat Simple_repeat 2 69 0 4 907 247 335 74 25 chr13 42302109 42302271 -77982041 - Lx8 LINE L1 -393 7080 6911 4 907 1544 211 35 14 chr13 42302302 42302668 -77981644 - MTD LTR MaLR -45 374 1 4 907 246 327 63 67 chr13 42302671 42302894 -77981418 - Lx8 LINE L1 -567 6906 6685 4 907 700 306 59 21 chr13 42302922 42303159 -77981153 - Lx8 LINE L1 -896 6577 6332 4 907 182 185 0 53 chr13 42303303 42303360 -77980952 + GA-rich Low_complexity Low_complexity 5 58 0 4 907 425 224 91 53 chr13 42303695 42303827 -77980485 + ID_B1 SINE B4 80 216 -8 4 907 293 234 139 59 chr13 42305815 42306043 -77978269 + MER33 DNA MER1_type 52 296 -28 4 907 348 94 0 0 chr13 42306147 42306200 -77978112 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 907 216 184 0 0 chr13 42306203 42306252 -77978060 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 4 907 387 0 0 0 chr13 42306461 42306504 -77977808 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 907 294 254 0 0 chr13 42306697 42306768 -77977544 + ID_B1 SINE B4 84 154 -70 4 907 257 300 0 24 chr13 42306768 42306779 -77977533 + PB1D10 SINE Alu 3 82 -35 4 907 233 191 0 0 chr13 42306779 42306821 -77977491 - ORR1C2 LTR MaLR 0 384 343 4 907 207 0 0 0 chr13 42306906 42306929 -77977383 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 907 1849 159 79 12 chr13 42306983 42307326 -77976986 - ORR1B2 LTR MaLR 0 367 2 4 907 327 302 95 0 chr13 42307489 42307615 -77976697 - ID_B1 SINE B4 -7 217 80 4 907 324 294 39 8 chr13 42307635 42307762 -77976550 - B1F2 SINE Alu -1 148 18 4 907 978 97 0 0 chr13 42307905 42308049 -77976263 + (TTTC)n Simple_repeat Simple_repeat 2 145 0 4 907 189 0 0 0 chr13 42308058 42308079 -77976233 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4 907 876 104 0 0 chr13 42308079 42308204 -77976108 - B1_Mus1 SINE Alu -12 136 12 4 907 2651 97 32 32 chr13 42308204 42308610 -77975702 - Lx LINE L1 -19 6635 6230 4 907 2042 139 48 11 chr13 42310162 42310518 -77973794 - ORR1C1 LTR MaLR 0 378 10 4 907 297 128 0 0 chr13 42310518 42310565 -77973747 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 907 224 362 0 60 chr13 42310590 42310690 -77973622 - B3A SINE B2 -103 95 2 5 907 255 31 0 0 chr13 42310852 42310884 -77973428 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 907 823 224 34 150 chr13 42311193 42311519 -77972793 - B4A SINE B4 -2 290 3 5 907 309 51 0 0 chr13 42311726 42311765 -77972547 + (T)n Simple_repeat Simple_repeat 1 39 0 5 907 668 217 7 7 chr13 42312017 42312161 -77972151 - ID_B1 SINE B4 -2 222 79 5 907 544 289 92 10 chr13 42312285 42312491 -77971821 - MTD LTR MaLR 0 419 197 5 907 760 217 101 45 chr13 42312510 42312708 -77971604 - B3 SINE B2 -1 215 7 5 907 622 258 49 29 chr13 42312702 42312906 -77971406 - MTD LTR MaLR -194 225 18 5 907 21 0 0 0 chr13 42312938 42312959 -77971353 + AT_rich Low_complexity Low_complexity 1 21 0 5 907 629 343 43 26 chr13 42312973 42313389 -77970923 - Lx8 LINE L1 0 7473 7051 5 907 283 286 92 12 chr13 42313433 42313539 -77970773 - PB1D7 SINE Alu -7 113 1 5 907 1726 153 106 34 chr13 42313681 42314039 -77970273 + ORR1B1 LTR MaLR 3 386 -8 5 907 317 304 71 33 chr13 42316081 42316292 -77968020 + MLT1C LTR MaLR 4 222 -245 5 907 298 330 9 0 chr13 42316367 42316479 -77967833 + MLT1C LTR MaLR 275 387 -3 5 907 288 309 67 62 chr13 42317388 42317612 -77966700 - ORR1E LTR MaLR -20 339 115 5 907 216 178 0 0 chr13 42318098 42318143 -77966169 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 907 1017 271 32 25 chr13 42318154 42318438 -77965874 - B4 SINE B4 -2 290 5 5 907 513 246 220 89 chr13 42318578 42318883 -77965429 - ORR1E LTR MaLR -9 350 6 5 907 929 271 51 29 chr13 42319773 42320123 -77964189 + MLT1B LTR MaLR 29 386 -4 5 907 265 364 58 73 chr13 42320225 42320607 -77963705 + L2a LINE L2 3051 3426 0 5 907 342 0 0 0 chr13 42320776 42320814 -77963498 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 907 273 109 0 0 chr13 42321748 42321794 -77962518 + (TCCC)n Simple_repeat Simple_repeat 2 47 0 5 907 253 254 14 14 chr13 42321956 42322028 -77962284 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 5 907 324 0 0 0 chr13 42322097 42322133 -77962179 + (GGA)n Simple_repeat Simple_repeat 2 37 0 5 907 238 345 100 0 chr13 42322393 42322593 -77961719 - MER102a DNA MER1_type -61 269 50 5 907 285 29 0 0 chr13 42323121 42323155 -77961157 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 907 380 331 43 6 chr13 42323758 42323919 -77960393 - MER2 DNA MER2_type -128 217 51 5 907 699 233 15 0 chr13 42325113 42325246 -77959066 + B1_Mur1 SINE Alu 2 136 -13 5 907 240 86 0 0 chr13 42325246 42325281 -77959031 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 907 191 169 31 0 chr13 42325286 42325351 -77958961 + (CAGA)n Simple_repeat Simple_repeat 2 68 0 5 907 22 35 0 0 chr13 42325501 42325530 -77958782 + AT_rich Low_complexity Low_complexity 1 29 0 5 907 554 255 160 21 chr13 42326919 42327107 -77957205 - B3 SINE B2 0 216 3 5 907 414 241 0 51 chr13 42327252 42327370 -77956942 - PB1D10 SINE Alu -5 112 1 5 907 720 195 0 0 chr13 42327428 42327587 -77956725 + (CA)n Simple_repeat Simple_repeat 2 160 0 5 907 453 219 0 0 chr13 42327598 42327712 -77956600 + (CA)n Simple_repeat Simple_repeat 2 115 0 5 907 249 260 0 0 chr13 42327725 42327802 -77956510 + (CA)n Simple_repeat Simple_repeat 1 77 0 5 907 428 51 17 0 chr13 42328492 42328551 -77955761 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 907 356 108 0 44 chr13 42328551 42328608 -77955704 + polypyrimidine Low_complexity Low_complexity 2 56 0 5 907 192 71 0 0 chr13 42328607 42328622 -77955690 + (TA)n Simple_repeat Simple_repeat 2 16 0 5 907 225 0 0 0 chr13 42328622 42328647 -77955665 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 907 192 71 0 0 chr13 42328647 42328659 -77955653 + (TA)n Simple_repeat Simple_repeat 2 13 0 5 907 254 95 0 23 chr13 42328957 42329000 -77955312 + (GGA)n Simple_repeat Simple_repeat 2 43 0 5 907 858 154 14 7 chr13 42329978 42330122 -77954190 + B1_Mur4 SINE Alu 5 149 -1 5 907 357 24 0 0 chr13 42330140 42330182 -77954130 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 5 907 369 62 0 0 chr13 42330906 42330954 -77953358 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 907 368 242 52 15 chr13 42331193 42331327 -77952985 - L1MA7 LINE L1 -121 6170 6032 5 907 231 234 74 83 chr13 42331316 42331437 -77952875 + L1MA7 LINE L1 6114 6233 -58 5 907 429 97 0 0 chr13 42332011 42332083 -77952229 + (TC)n Simple_repeat Simple_repeat 1 72 0 5 907 1398 99 16 0 chr13 42332083 42332275 -77952037 - B2_Mm2 SINE B2 0 195 1 5 907 329 289 104 32 chr13 42332695 42332820 -77951492 + Tigger5 DNA MER2_type 37 170 -2236 5 907 946 252 11 174 chr13 42333411 42333853 -77950459 - MTD LTR MaLR -14 405 36 5 907 462 114 0 0 chr13 42334359 42334429 -77949883 + (CACG)n Simple_repeat Simple_repeat 2 71 0 5 907 198 0 0 0 chr13 42334429 42334450 -77949862 + (TC)n Simple_repeat Simple_repeat 2 23 0 5 907 252 0 0 0 chr13 42334964 42334992 -77949320 + (CAA)n Simple_repeat Simple_repeat 2 29 0 5 907 754 315 175 31 chr13 42335145 42335332 -77948980 + MER82 DNA MER2_type 41 251 -402 5 907 2219 101 3 71 chr13 42335332 42335683 -77948629 - ORR1A4 LTR MaLR 0 329 3 5 907 754 315 175 31 chr13 42335683 42336010 -77948302 + MER82 DNA MER2_type 252 629 -24 5 908 21 0 0 0 chr13 42337964 42337985 -77946327 + AT_rich Low_complexity Low_complexity 1 21 0 5 908 506 275 23 8 chr13 42338592 42338724 -77945588 - B1F SINE Alu -14 135 2 5 908 251 71 24 0 chr13 42338776 42338818 -77945494 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 5 908 449 273 110 61 chr13 42338960 42339094 -77945218 - MER2 DNA MER2_type -2 343 204 5 908 720 242 54 21 chr13 42339094 42339280 -77945032 - B3A SINE B2 -6 192 1 5 908 449 273 110 61 chr13 42339280 42339391 -77944921 - MER2 DNA MER2_type -142 203 86 5 908 393 22 0 0 chr13 42339407 42339453 -77944859 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 908 205 248 182 29 chr13 42340544 42340681 -77943631 - MIRb SINE MIR -73 195 38 5 908 559 263 77 90 chr13 42341815 42342049 -77942263 - B4A SINE B4 -8 284 54 5 908 180 0 0 0 chr13 42342290 42342310 -77942002 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 908 398 329 97 38 chr13 42342632 42342924 -77941388 - MTC LTR MaLR -97 282 18 5 908 25 51 0 0 chr13 42342932 42342971 -77941341 + AT_rich Low_complexity Low_complexity 1 39 0 5 908 539 271 16 144 chr13 42343393 42343649 -77940663 + MTE2a LTR MaLR 1 250 -169 5 908 270 0 0 0 chr13 42343766 42343796 -77940516 + (TTCTC)n Simple_repeat Simple_repeat 1 30 0 5 908 1410 56 0 0 chr13 42343796 42343976 -77940336 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 5 908 689 129 9 0 chr13 42343980 42344096 -77940216 + (TTCTC)n Simple_repeat Simple_repeat 2 118 0 5 908 309 26 0 0 chr13 42344459 42344497 -77939815 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 908 7371 207 76 21 chr13 42344499 42346352 -77937960 - Lx6 LINE L1 -32 7428 5459 5 908 560 139 138 116 chr13 42346711 42346781 -77937531 + B1_Mur4 SINE Alu 1 55 -95 5 908 1005 158 0 0 chr13 42346781 42346958 -77937354 + (CAGAGA)n Simple_repeat Simple_repeat 1 177 0 5 908 560 139 138 116 chr13 42346958 42347025 -77937287 + B1_Mur4 SINE Alu 56 141 -9 5 908 488 339 111 30 chr13 42347276 42347610 -77936702 + MLT1J LTR MaLR 1 361 -151 5 908 459 0 0 0 chr13 42347614 42347665 -77936647 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 908 609 14 0 0 chr13 42348502 42348572 -77935740 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 908 384 77 0 0 chr13 42350010 42350062 -77934250 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 908 234 0 0 0 chr13 42350062 42350087 -77934225 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 908 333 346 58 7 chr13 42350087 42350224 -77934088 - RSINE1 SINE B4 -6 159 16 5 908 788 201 0 7 chr13 42350265 42350410 -77933902 - B1_Mur1 SINE Alu 0 149 6 5 908 329 190 0 102 chr13 42350331 42350419 -77933893 - MT2B2 LTR ERVL -345 239 161 5 908 1539 172 99 45 chr13 42350774 42351127 -77933185 + ORR1D1 LTR MaLR 3 374 0 5 908 317 271 150 75 chr13 42351837 42352064 -77932248 - Charlie1a DNA MER1_type -590 865 622 5 908 495 212 242 13 chr13 42352545 42352698 -77931614 - B3A SINE B2 -10 188 1 5 908 691 281 0 7 chr13 42352716 42352863 -77931449 + RSINE1 SINE B4 20 165 0 5 908 402 21 0 0 chr13 42353227 42353274 -77931038 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 908 227 284 0 0 chr13 42353343 42353417 -77930895 + L1MA6 LINE L1 6220 6293 -7 5 908 361 271 26 65 chr13 42354452 42354606 -77929706 + RSINE1 SINE B4 3 150 -15 5 908 228 351 98 13 chr13 42355659 42355812 -77928500 - MER5A1 DNA MER1_type 0 166 1 5 908 251 363 11 0 chr13 42356811 42356902 -77927410 - PB1D10 SINE Alu -21 96 5 5 908 984 136 0 0 chr13 42357028 42357190 -77927122 + (TCCC)n Simple_repeat Simple_repeat 4 165 0 5 908 582 231 15 23 chr13 42357203 42357336 -77926976 - B1_Mur1 SINE Alu -16 133 2 5 908 243 125 0 0 chr13 42357358 42357398 -77926914 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 908 219 69 0 0 chr13 42357424 42357453 -77926859 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 908 246 207 0 17 chr13 42357475 42357534 -77926778 - B3A SINE B2 -136 62 5 5 908 216 0 0 0 chr13 42357885 42357909 -77926403 + (A)n Simple_repeat Simple_repeat 1 24 0 5 908 26 64 0 0 chr13 42358256 42358303 -77926009 + AT_rich Low_complexity Low_complexity 1 47 0 5 908 207 0 0 0 chr13 42358370 42358393 -77925919 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 908 1431 117 4 59 chr13 42358604 42358841 -77925471 + URR1B DNA MER1_type 1 224 -1 5 908 418 271 59 15 chr13 42359142 42359277 -77925035 - MLT1A1 LTR MaLR 0 408 268 5 908 232 284 97 10 chr13 42359360 42359463 -77924849 - MLT1A1 LTR MaLR -296 112 1 5 908 613 180 0 0 chr13 42360677 42360788 -77923524 + B3 SINE B2 1 111 -105 5 908 29 0 0 0 chr13 42360801 42360830 -77923482 + AT_rich Low_complexity Low_complexity 1 29 0 5 908 672 67 0 0 chr13 42362241 42362331 -77921981 + (TG)n Simple_repeat Simple_repeat 1 90 0 6 908 21 82 0 0 chr13 42362542 42362591 -77921721 + AT_rich Low_complexity Low_complexity 1 49 0 6 908 230 301 32 0 chr13 42362594 42362687 -77921625 + (TA)n Simple_repeat Simple_repeat 2 97 0 6 908 821 168 7 0 chr13 42362997 42363134 -77921178 - B1_Mus1 SINE Alu -9 139 2 6 908 308 209 30 37 chr13 42363258 42363392 -77920920 - Lx6 LINE L1 0 7460 7328 6 908 3957 209 62 83 chr13 42363400 42363682 -77920630 - Lx7 LINE L1 -47 7649 7378 6 908 207 0 0 0 chr13 42363682 42363705 -77920607 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 908 3957 209 62 83 chr13 42363705 42364496 -77919816 - Lx7 LINE L1 -319 7377 6598 6 908 1815 237 76 10 chr13 42364489 42364773 -77919539 - Lx6 LINE L1 -980 6480 6171 6 908 342 0 0 0 chr13 42364773 42364811 -77919501 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 908 1815 237 76 10 chr13 42364811 42364935 -77919377 - Lx6 LINE L1 -1290 6170 6046 6 908 280 257 0 0 chr13 42365987 42366057 -77918255 + (TG)n Simple_repeat Simple_repeat 1 70 0 6 908 938 219 128 34 chr13 42366057 42366322 -77917990 - B4 SINE B4 0 292 3 6 908 201 147 0 0 chr13 42367315 42367349 -77916963 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 6 908 620 59 0 12 chr13 42367349 42367435 -77916877 + (TCCC)n Simple_repeat Simple_repeat 4 88 0 6 908 1515 284 17 12 chr13 42367497 42367900 -77916412 - Lx6 LINE L1 -79 7381 6977 6 908 549 0 0 0 chr13 42368789 42368850 -77915462 + (GTTTG)n Simple_repeat Simple_repeat 2 62 0 6 908 2459 278 58 110 chr13 42370100 42371145 -77913167 + Lx8 LINE L1 6198 7188 -285 6 908 23 0 0 0 chr13 42371707 42371730 -77912582 + AT_rich Low_complexity Low_complexity 1 23 0 6 908 229 273 165 8 chr13 42372276 42372409 -77911903 - HAL1 LINE L1 -298 2209 2056 6 908 509 320 16 39 chr13 42372867 42373049 -77911263 + Tigger5 DNA MER2_type 8 185 -2221 6 908 482 322 94 0 chr13 42373091 42373293 -77911019 + Tigger5 DNA MER2_type 2170 2390 -16 6 908 199 351 30 22 chr13 42373722 42373856 -77910456 - L2 LINE L2 -2865 554 420 6 908 531 0 0 0 chr13 42376066 42376125 -77908187 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 908 306 0 0 0 chr13 42376125 42376158 -77908154 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 908 640 349 25 18 chr13 42376871 42377157 -77907155 + B4A SINE B4 5 292 0 6 908 406 292 83 0 chr13 42377245 42377413 -77906899 + MLT1B LTR MaLR 1 182 -208 6 908 725 274 32 40 chr13 42377441 42377692 -77906620 + B4A SINE B4 44 292 0 6 908 429 342 90 11 chr13 42377765 42377954 -77906358 + MLT1B LTR MaLR 180 383 -7 6 908 279 0 0 0 chr13 42378972 42379003 -77905309 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 908 1091 74 0 0 chr13 42379006 42379141 -77905171 - B1_Mus2 SINE Alu -12 135 1 6 908 733 301 5 0 chr13 42379264 42379467 -77904845 + B3 SINE B2 3 206 -10 6 908 605 314 0 6 chr13 42379962 42380119 -77904193 - B3 SINE B2 -51 165 10 6 908 1683 204 50 13 chr13 42380412 42380810 -77903502 - MTC LTR MaLR -8 413 1 6 908 540 81 0 0 chr13 42382700 42382774 -77901538 + (TAAA)n Simple_repeat Simple_repeat 3 76 0 6 908 187 300 17 0 chr13 42383177 42383237 -77901075 - L2 LINE L2 -831 2588 2528 6 908 236 75 0 0 chr13 42383318 42383358 -77900954 + 4.5SRNA scRNA scRNA 4 43 -51 6 908 192 40 0 0 chr13 42384803 42384828 -77899484 + (TTG)n Simple_repeat Simple_repeat 3 27 0 6 908 26 0 0 0 chr13 42384838 42384864 -77899448 + AT_rich Low_complexity Low_complexity 1 26 0 6 908 711 250 12 0 chr13 42385496 42385660 -77898652 + ID_B1 SINE B4 46 211 -13 6 908 493 261 135 26 chr13 42385960 42386172 -77898140 - B3A SINE B2 0 216 1 6 908 534 279 0 8 chr13 42386264 42386387 -77897925 + ID_B1 SINE B4 92 213 -11 6 908 23 0 0 0 chr13 42386387 42386410 -77897902 + AT_rich Low_complexity Low_complexity 1 23 0 6 908 228 283 0 54 chr13 42386596 42386652 -77897660 - ID4 SINE ID -1 82 30 6 908 237 65 0 0 chr13 42387430 42387461 -77896851 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 908 681 76 0 0 chr13 42387836 42387928 -77896384 + (TTCC)n Simple_repeat Simple_repeat 3 94 0 6 908 280 302 65 19 chr13 42388216 42388324 -77895988 + B4A SINE B4 162 274 -18 6 908 389 20 20 0 chr13 42389293 42389343 -77894969 + (TTTTA)n Simple_repeat Simple_repeat 5 55 0 6 908 276 30 0 0 chr13 42389363 42389396 -77894916 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 908 204 67 0 0 chr13 42389610 42389640 -77894672 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 6 908 995 102 1 6 chr13 42389913 42390067 -77894245 - B1_Mus1 SINE Alu 0 148 1 6 908 274 306 0 14 chr13 42390372 42390445 -77893867 + polypyrimidine Low_complexity Low_complexity 3 74 0 6 908 462 36 0 0 chr13 42390485 42390541 -77893771 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 6 908 406 292 26 0 chr13 42390543 42390656 -77893656 - PB1D10 SINE Alu -1 116 1 6 908 425 273 10 0 chr13 42390558 42390657 -77893655 - ID_B1 SINE B4 -44 180 81 6 908 25 0 0 0 chr13 42391100 42391125 -77893187 + AT_rich Low_complexity Low_complexity 1 25 0 6 908 330 254 33 58 chr13 42391176 42391297 -77893015 + B1F SINE Alu 32 149 0 6 908 737 227 0 7 chr13 42391435 42391577 -77892735 - B1_Mur1 SINE Alu -7 142 2 6 908 412 268 7 92 chr13 42391592 42391744 -77892568 + ID_B1 SINE B4 83 221 -3 6 908 362 85 0 17 chr13 42392303 42392363 -77891949 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 908 673 287 24 34 chr13 42392973 42393265 -77891047 + B4A SINE B4 2 290 -2 6 908 323 78 0 19 chr13 42393267 42393319 -77890993 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 908 279 0 0 0 chr13 42395364 42395395 -77888917 + (CTG)n Simple_repeat Simple_repeat 1 31 0 6 908 408 40 0 0 chr13 42396215 42396265 -77888047 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 908 189 94 0 0 chr13 42397118 42397150 -77887162 + (A)n Simple_repeat Simple_repeat 1 32 0 6 908 193 109 21 21 chr13 42397390 42397437 -77886875 + CT-rich Low_complexity Low_complexity 2 48 0 6 908 504 0 0 0 chr13 42398609 42398665 -77885647 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 908 270 0 0 0 chr13 42398665 42398694 -77885618 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 908 369 0 0 0 chr13 42401628 42401669 -77882643 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 908 22 0 0 0 chr13 42403259 42403281 -77881031 + AT_rich Low_complexity Low_complexity 1 22 0 6 908 291 28 0 0 chr13 42404076 42404112 -77880200 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 908 219 69 0 0 chr13 42404484 42404513 -77879799 + (TGGGGG)n Simple_repeat Simple_repeat 4 32 0 6 908 426 20 0 0 chr13 42404620 42404671 -77879641 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 908 990 70 27 34 chr13 42404873 42405020 -77879292 - B1_Mus1 SINE Alu -1 147 2 6 908 219 36 0 0 chr13 42405614 42405642 -77878670 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 6 908 351 65 0 0 chr13 42407371 42407417 -77876895 + (TATG)n Simple_repeat Simple_repeat 1 46 0 6 908 834 156 0 0 chr13 42410544 42410679 -77873633 + B1_Mus2 SINE Alu 10 144 -3 6 908 926 116 7 0 chr13 42410699 42410846 -77873466 + (GA)n Simple_repeat Simple_repeat 1 148 0 6 908 568 48 0 35 chr13 42410848 42410934 -77873378 + (GGAA)n Simple_repeat Simple_repeat 1 83 0 6 908 423 0 0 0 chr13 42411815 42411862 -77872450 + (CTA)n Simple_repeat Simple_repeat 1 47 0 6 908 360 0 0 0 chr13 42412457 42412497 -77871815 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 908 387 307 33 82 chr13 42412673 42412988 -77871324 - MER31-int LTR ERV1 -1227 4129 3554 6 908 533 221 48 32 chr13 42413561 42413687 -77870625 + B3A SINE B2 17 144 -54 6 908 488 298 8 0 chr13 42413705 42413836 -77870476 + Tigger7 DNA MER2_type 472 603 -1888 6 908 447 252 32 24 chr13 42414182 42414308 -77870004 + RSINE1 SINE B4 6 132 -33 6 908 345 316 58 50 chr13 42414475 42414715 -77869597 + MLT1A0 LTR MaLR 38 279 -86 6 908 278 311 77 42 chr13 42415616 42415784 -77868528 + MIRb SINE MIR 14 191 -77 6 908 186 374 0 0 chr13 42415920 42416011 -77868301 - MER5A DNA MER1_type -6 183 93 6 908 207 0 0 0 chr13 42416139 42416162 -77868150 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 908 708 290 180 9 chr13 42416842 42417169 -77867143 + Tigger7 DNA MER2_type 1 383 -2108 6 908 361 298 8 39 chr13 42417192 42417321 -77866991 + Tigger7 DNA MER2_type 491 615 -1876 6 908 670 135 191 0 chr13 42417706 42417832 -77866480 + B1_Mur4 SINE Alu 1 150 0 6 908 252 0 0 0 chr13 42418025 42418053 -77866259 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 908 27 29 0 0 chr13 42418060 42418094 -77866218 + AT_rich Low_complexity Low_complexity 1 34 0 6 908 25 75 0 0 chr13 42419177 42419230 -77865082 + AT_rich Low_complexity Low_complexity 1 53 0 6 908 310 190 54 34 chr13 42419270 42419417 -77864895 + (TA)n Simple_repeat Simple_repeat 1 150 0 6 908 280 215 73 31 chr13 42419492 42419588 -77864724 + MTEa LTR MaLR 272 371 -8 6 908 540 303 27 27 chr13 42419681 42419827 -77864485 + RSINE1 SINE B4 2 147 -18 6 908 189 107 0 0 chr13 42419828 42419856 -77864456 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 908 598 272 47 98 chr13 42419932 42420339 -77863973 - L1M4 LINE L1 -787 5657 5272 6 908 21 0 0 0 chr13 42420734 42420755 -77863557 + AT_rich Low_complexity Low_complexity 1 21 0 6 908 269 264 83 53 chr13 42420774 42420906 -77863406 - L1M4 LINE L1 -1085 5061 4926 6 908 270 381 67 7 chr13 42421030 42421165 -77863147 + MER20 DNA MER1_type 1 143 -76 6 908 485 211 39 39 chr13 42421660 42421788 -77862524 + B3 SINE B2 2 129 -87 6 908 435 78 13 25 chr13 42421798 42421877 -77862435 + (CA)n Simple_repeat Simple_repeat 1 78 0 6 908 26 0 0 0 chr13 42421923 42421949 -77862363 + AT_rich Low_complexity Low_complexity 1 26 0 6 908 1630 279 26 53 chr13 42423223 42423802 -77860510 - Lx8 LINE L1 0 7473 6911 6 908 5067 11 0 4 chr13 42424985 42425548 -77858764 + L1Md_T LINE L1 6022 6582 0 7 908 183 42 0 0 chr13 42426449 42426473 -77857839 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 7 908 344 40 0 20 chr13 42426734 42426785 -77857527 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 908 829 284 41 14 chr13 42426792 42427010 -77857302 - B4A SINE B4 -23 269 46 7 908 410 267 30 0 chr13 42427151 42427252 -77857060 - PB1D10 SINE Alu -13 104 1 7 908 541 226 38 25 chr13 42427303 42427489 -77856823 - ORR1D2 LTR MaLR -8 362 164 7 908 3091 62 21 3 chr13 42427749 42428138 -77856174 + MTA_Mm LTR MaLR 1 396 0 7 908 336 135 13 26 chr13 42428568 42428644 -77855668 + GA-rich Low_complexity Low_complexity 2 76 0 7 908 275 336 41 0 chr13 42429575 42429697 -77854615 + L2a LINE L2 3269 3395 -31 7 908 202 140 35 17 chr13 42430016 42430074 -77854238 + (TCTG)n Simple_repeat Simple_repeat 4 62 0 7 908 254 234 188 51 chr13 42431962 42432079 -77852233 + L2a LINE L2 3255 3426 0 7 908 219 324 0 0 chr13 42432634 42432702 -77851610 + ID4_ SINE ID 1 68 -15 7 908 525 16 0 0 chr13 42432712 42432774 -77851538 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 908 31 0 0 0 chr13 42432900 42432931 -77851381 + AT_rich Low_complexity Low_complexity 1 31 0 7 908 378 0 0 0 chr13 42433965 42434007 -77850305 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 908 309 26 0 0 chr13 42434723 42434761 -77849551 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 908 402 21 0 0 chr13 42434761 42434808 -77849504 + (TGG)n Simple_repeat Simple_repeat 3 49 0 7 908 579 200 170 72 chr13 42435700 42435894 -77848418 - B3 SINE B2 0 216 4 7 908 3337 152 31 31 chr13 42436454 42437036 -77847276 - RMER4B LTR ERVK 0 585 4 7 908 192 77 0 0 chr13 42437521 42437547 -77846765 + (A)n Simple_repeat Simple_repeat 1 26 0 7 908 1216 28 22 11 chr13 42438126 42438304 -77846008 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 908 1180 231 106 6 chr13 42438575 42438906 -77845406 + ORR1D2 LTR MaLR 7 370 0 7 908 372 282 207 20 chr13 42438943 42439189 -77845123 + B4A SINE B4 1 292 0 7 908 261 290 41 61 chr13 42439264 42439411 -77844901 - L1MA5 LINE L1 0 6300 6157 7 908 564 293 96 16 chr13 42440431 42440681 -77843631 + B4 SINE B4 6 275 -17 7 908 1372 169 165 3 chr13 42440828 42441125 -77843187 - MTD LTR MaLR -8 411 67 7 908 255 324 17 75 chr13 42441125 42441245 -77843067 - PB1D10 SINE Alu 0 117 5 7 908 244 86 0 0 chr13 42442497 42442532 -77841780 + B3A SINE B2 5 39 -159 7 908 189 154 0 0 chr13 42442828 42442867 -77841445 + (CAGA)n Simple_repeat Simple_repeat 4 42 0 7 908 230 228 128 45 chr13 42442897 42443030 -77841282 - Lx8 LINE L1 0 7473 7330 7 908 8563 37 6 0 chr13 42443021 42444742 -77839570 - L1Md_F2 LINE L1 -12 6570 4840 7 908 1046 234 90 11 chr13 42444751 42445028 -77839284 - Lx8 LINE L1 -134 7339 7041 7 908 968 130 0 6 chr13 42445379 42445541 -77838771 + (TTTC)n Simple_repeat Simple_repeat 4 164 0 7 908 1146 84 0 0 chr13 42445543 42445685 -77838627 - B1_Mus1 SINE Alu -6 142 1 7 908 180 348 29 0 chr13 42447168 42447237 -77837075 + MIRm SINE MIR 204 274 -2 7 908 1176 55 0 7 chr13 42448111 42448259 -77836053 + B1_Mus2 SINE Alu 1 147 0 7 908 318 173 0 0 chr13 42448262 42448337 -77835975 + A-rich Low_complexity Low_complexity 1 75 0 7 908 236 189 39 39 chr13 42448430 42448507 -77835805 - MER2 DNA MER2_type -187 158 82 7 908 346 255 0 30 chr13 42448533 42448634 -77835678 - MTEa LTR MaLR -8 371 274 7 908 237 318 93 23 chr13 42448680 42448809 -77835503 - MTEa LTR MaLR -121 238 101 7 908 1576 141 259 13 chr13 42448857 42449058 -77835254 + RMER10B LTR ERVL 1 280 -118 7 908 948 57 32 6 chr13 42449058 42449216 -77835096 + (TC)n Simple_repeat Simple_repeat 2 163 0 7 908 1576 141 259 13 chr13 42449216 42449330 -77834982 + RMER10B LTR ERVL 281 394 -4 7 908 1394 157 9 0 chr13 42449389 42449612 -77834700 + URR1B DNA MER1_type 1 225 0 7 908 459 287 85 20 chr13 42449938 42450137 -77834175 - MER2 DNA MER2_type -27 318 107 7 908 986 262 96 9 chr13 42450174 42450498 -77833814 - ORR1E LTR MaLR 0 359 8 7 908 243 0 0 0 chr13 42450668 42450695 -77833617 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 908 546 259 25 19 chr13 42451597 42451739 -77832573 + RSINE1 SINE B4 4 146 -19 7 908 429 36 0 0 chr13 42451739 42451794 -77832518 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 7 908 546 259 25 19 chr13 42451794 42451812 -77832500 + RSINE1 SINE B4 147 164 -1 7 908 1175 294 80 29 chr13 42452457 42452969 -77831343 + Lx8 LINE L1 6936 7473 0 7 908 650 266 96 0 chr13 42453610 42453798 -77830514 - B3 SINE B2 -6 210 5 7 908 274 241 85 75 chr13 42453831 42453925 -77830387 + B4A SINE B4 3 97 -195 7 908 180 0 0 0 chr13 42454771 42454791 -77829521 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 7 908 710 256 103 0 chr13 42454826 42455021 -77829291 - B3 SINE B2 0 216 2 7 908 404 37 19 0 chr13 42455153 42455207 -77829105 + (TATG)n Simple_repeat Simple_repeat 4 58 0 7 908 774 205 52 40 chr13 42455239 42455412 -77828900 + MTD LTR MaLR 2 176 -243 7 908 654 49 0 0 chr13 42455414 42455496 -77828816 + (TA)n Simple_repeat Simple_repeat 2 83 0 7 908 623 268 177 94 chr13 42455907 42456127 -77828185 - MTEa LTR MaLR 0 379 184 7 908 1260 68 73 6 chr13 42456127 42456304 -77828008 + B2_Mm2 SINE B2 1 189 -6 7 908 623 268 177 94 chr13 42456304 42456433 -77827879 - MTEa LTR MaLR -196 183 1 7 908 196 359 73 51 chr13 42458407 42458721 -77825591 - L2a LINE L2 -12 3414 3094 7 908 589 182 87 13 chr13 42458901 42458916 -77825396 + RMER4B LTR ERVK 17 33 -552 7 908 248 0 0 30 chr13 42458916 42458949 -77825363 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 7 908 589 182 87 13 chr13 42458949 42459083 -77825229 + RMER4B LTR ERVK 34 176 -409 7 908 407 158 43 17 chr13 42459163 42459279 -77825033 + GA-rich Low_complexity Low_complexity 3 121 0 7 908 1221 78 0 0 chr13 42459298 42459464 -77824848 + (GGAGAA)n Simple_repeat Simple_repeat 3 168 0 7 908 289 264 21 127 chr13 42459474 42459679 -77824633 + RMER4B LTR ERVK 358 578 -7 7 908 346 292 8 32 chr13 42459760 42459884 -77824428 + MT2A LTR ERVL 251 371 -162 7 908 314 308 58 17 chr13 42460002 42460174 -77824138 - L2a LINE L2 -418 3001 2823 7 908 248 319 21 42 chr13 42460496 42460591 -77823721 - MTEa LTR MaLR -281 98 6 7 908 1382 286 73 58 chr13 42460871 42461636 -77822676 - Lx7 LINE L1 -1330 6366 5590 7 908 1140 275 78 22 chr13 42461638 42461999 -77822313 + Lx8 LINE L1 6354 6734 -739 7 908 507 344 26 52 chr13 42461990 42462137 -77822175 + Lx8 LINE L1 7118 7263 -210 7 908 1934 193 33 8 chr13 42462137 42462502 -77821810 + ORR1D1 LTR MaLR 1 374 0 7 908 507 344 26 52 chr13 42462502 42462621 -77821691 + Lx8 LINE L1 7264 7377 -96 7 908 333 291 30 52 chr13 42462868 42463002 -77821310 + RSINE1 SINE B4 2 132 -33 7 908 22 56 0 0 chr13 42463007 42463043 -77821269 + AT_rich Low_complexity Low_complexity 1 36 0 7 908 396 0 0 0 chr13 42463869 42463913 -77820399 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 908 860 304 28 7 chr13 42464051 42464336 -77819976 - MLT1B LTR MaLR -92 298 8 7 908 707 291 71 81 chr13 42464410 42464446 -77819866 + MTEb LTR MaLR 3 55 -324 7 908 378 0 0 0 chr13 42464446 42464488 -77819824 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 908 707 291 71 81 chr13 42464488 42464832 -77819480 + MTEb LTR MaLR 56 378 -1 7 908 441 0 0 0 chr13 42465795 42465844 -77818468 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 7 908 237 207 52 0 chr13 42465844 42465891 -77818421 - B1F SINE Alu -10 139 90 7 908 239 276 79 0 chr13 42465932 42466008 -77818304 - ID SINE ID -141 83 2 7 908 187 114 0 43 chr13 42466498 42466544 -77817768 + A-rich Low_complexity Low_complexity 2 45 0 7 909 213 355 135 40 chr13 42467702 42468028 -77816284 - L2 LINE L2 -1196 2223 1867 7 909 1884 158 51 17 chr13 42468336 42468748 -77815564 - RLTR31A_Mm LTR ERVK -158 426 1 7 909 212 336 104 50 chr13 42468870 42469092 -77815220 - L2 LINE L2 -1913 1506 1273 7 909 318 226 0 70 chr13 42470582 42470696 -77813616 - Lx2 LINE L1 -9 6988 6883 7 909 273 264 111 0 chr13 42470743 42470815 -77813497 + ID SINE ID 2 81 -143 7 909 327 94 0 36 chr13 42470831 42470886 -77813426 + ORR1C2 LTR MaLR 6 58 -326 7 909 418 223 29 0 chr13 42470876 42470979 -77813333 + ORR1C2 LTR MaLR 279 384 0 7 909 281 262 0 0 chr13 42470979 42471040 -77813272 + ID_B1 SINE B4 89 149 -75 7 909 315 0 0 0 chr13 42471066 42471101 -77813211 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 7 909 325 281 0 0 chr13 42471106 42471227 -77813085 + CT-rich Low_complexity Low_complexity 2 122 0 7 909 228 100 0 0 chr13 42471227 42471267 -77813045 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 7 909 526 264 84 21 chr13 42471478 42471668 -77812644 + B4A SINE B4 1 202 -90 7 909 516 122 0 0 chr13 42472016 42472098 -77812214 + (CAA)n Simple_repeat Simple_repeat 2 83 0 7 909 3520 151 12 3 chr13 42472294 42472867 -77811445 - Lx3_Mus LINE L1 0 7009 6432 7 909 471 18 0 0 chr13 42472994 42473050 -77811262 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 909 335 301 0 12 chr13 42473830 42473914 -77810398 + B4A SINE B4 88 170 -122 7 909 1107 134 0 0 chr13 42474594 42474773 -77809539 + (GA)n Simple_repeat Simple_repeat 2 180 0 7 909 498 139 13 0 chr13 42474773 42474852 -77809460 + GA-rich Low_complexity Low_complexity 3 82 0 7 909 901 112 5 38 chr13 42474852 42475037 -77809275 + A-rich Low_complexity Low_complexity 1 179 0 7 909 520 282 28 73 chr13 42475403 42475621 -77808691 - ID_B1 SINE B4 -9 215 8 7 909 685 313 72 50 chr13 42475847 42476408 -77807904 - L1M2 LINE L1 -1096 5044 4473 7 909 584 239 89 12 chr13 42476445 42476614 -77807698 - B3A SINE B2 -16 182 1 7 909 189 147 0 0 chr13 42476642 42476676 -77807636 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 7 909 413 204 41 0 chr13 42476719 42476817 -77807495 - RSINE1 SINE B4 -63 102 1 7 909 26 30 0 0 chr13 42476821 42476854 -77807458 + AT_rich Low_complexity Low_complexity 1 33 0 7 909 183 222 74 0 chr13 42476960 42477014 -77807298 - MIRm SINE MIR -108 154 97 7 909 342 0 0 0 chr13 42477854 42477892 -77806420 + (GA)n Simple_repeat Simple_repeat 1 38 0 8 909 377 339 115 17 chr13 42478355 42478643 -77805669 - L1M5 LINE L1 -1099 5047 4732 8 909 8483 27 7 0 chr13 42478875 42480044 -77804268 - L1Md_A LINE L1 -1 6581 5401 8 909 1051 272 27 89 chr13 42480057 42480461 -77803851 - MTEa LTR MaLR 0 379 1 8 909 434 335 78 23 chr13 42480549 42480806 -77803506 + L1MEg LINE L1 197 467 -5985 8 909 478 301 38 25 chr13 42481513 42481673 -77802639 + RSINE1 SINE B4 3 164 -1 8 909 553 231 12 0 chr13 42481717 42481890 -77802422 + (CATATA)n Simple_repeat Simple_repeat 3 177 0 8 909 616 260 35 10 chr13 42482016 42482218 -77802094 + L1MEg LINE L1 2920 3126 -4424 8 909 1272 129 119 0 chr13 42482312 42482514 -77801798 - URR1A DNA MER1_type 0 226 1 8 909 456 302 134 0 chr13 42483272 42483451 -77800861 + B4A SINE B4 74 276 -16 8 909 185 65 0 31 chr13 42483489 42483521 -77800791 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 909 203 250 19 0 chr13 42483534 42483586 -77800726 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 909 597 265 18 0 chr13 42483617 42483783 -77800529 + L1MB1 LINE L1 5600 5768 -421 8 909 567 164 0 0 chr13 42483804 42483956 -77800356 + GA-rich Low_complexity Low_complexity 1 152 0 8 909 713 275 64 12 chr13 42484012 42484262 -77800050 + L1MB1 LINE L1 5881 6143 -25 8 909 549 244 133 0 chr13 42484259 42484440 -77799872 + L1MA6 LINE L1 5794 6010 -293 8 909 344 362 31 13 chr13 42484461 42484685 -77799627 + L1MA6 LINE L1 6064 6291 0 8 909 324 0 0 0 chr13 42484889 42484925 -77799387 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 909 1326 68 0 0 chr13 42485658 42485864 -77798448 + (TC)n Simple_repeat Simple_repeat 1 206 0 8 909 269 323 63 25 chr13 42486105 42486264 -77798048 - MER65D LTR ERV1 -47 426 262 8 909 474 279 13 0 chr13 42486956 42487110 -77797202 + L1M1 LINE L1 5617 5772 -531 8 909 423 0 0 0 chr13 42487161 42487208 -77797104 + (A)n Simple_repeat Simple_repeat 1 47 0 8 909 257 150 0 0 chr13 42487210 42487250 -77797062 + L1M1 LINE L1 5850 5889 -411 8 909 756 250 80 5 chr13 42487316 42487529 -77796783 + Lx8 LINE L1 7216 7444 -29 8 909 297 218 119 198 chr13 42487317 42487569 -77796743 + RMER1C Other Other 1107 1338 -4 8 909 513 0 0 0 chr13 42488004 42488061 -77796251 + (TA)n Simple_repeat Simple_repeat 1 57 0 8 909 457 279 0 58 chr13 42489311 42489448 -77794864 + ID_B1 SINE B4 89 217 -7 8 909 877 270 14 0 chr13 42489464 42489675 -77794637 + B3 SINE B2 1 214 -2 8 909 245 240 91 30 chr13 42491244 42491343 -77792969 + B3 SINE B2 111 215 -1 8 909 429 109 0 0 chr13 42492165 42492229 -77792083 + (CA)n Simple_repeat Simple_repeat 1 64 0 8 909 886 18 18 0 chr13 42493128 42493240 -77791072 + (CA)n Simple_repeat Simple_repeat 1 114 0 8 909 284 127 18 0 chr13 42496219 42496274 -77788038 + (CA)n Simple_repeat Simple_repeat 2 57 0 8 909 307 343 0 76 chr13 42496644 42496789 -77787523 - B4 SINE B4 0 292 159 8 909 1381 173 140 0 chr13 42497763 42498078 -77786234 + ORR1B1 LTR MaLR 1 359 -8 8 909 495 309 7 26 chr13 42498101 42498254 -77786058 - ORR1E LTR MaLR -171 188 39 8 909 201 345 66 26 chr13 42498330 42498482 -77785830 + MIRb SINE MIR 110 267 -1 8 909 345 274 250 57 chr13 42499208 42499452 -77784860 + B4A SINE B4 1 291 -1 8 909 372 123 0 0 chr13 42499487 42499560 -77784752 + (GA)n Simple_repeat Simple_repeat 2 74 0 8 909 191 236 91 0 chr13 42499660 42499715 -77784597 - MIRc SINE MIR -175 93 34 8 909 23 0 0 0 chr13 42500086 42500109 -77784203 + AT_rich Low_complexity Low_complexity 1 23 0 1 909 282 260 30 59 chr13 42500128 42500263 -77784049 + L1ME4a LINE L1 5760 5890 -234 2 909 6531 136 4 7 chr13 42500329 42501385 -77782927 + Lx LINE L1 5595 6647 -7 3 909 771 216 0 7 chr13 42501489 42501629 -77782683 - B1_Mur2 SINE Alu -5 144 6 4 909 26 0 0 0 chr13 42501632 42501658 -77782654 + AT_rich Low_complexity Low_complexity 1 26 0 5 909 511 272 10 100 chr13 42501662 42501862 -77782450 - B3A SINE B2 -16 182 1 6 909 297 324 105 12 chr13 42502295 42502467 -77781845 - Lx9 LINE L1 -1718 5926 5739 7 909 321 136 0 0 chr13 42502478 42502544 -77781768 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 8 909 222 37 0 0 chr13 42502932 42502959 -77781353 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 909 277 326 43 43 chr13 42503951 42504089 -77780223 - MTEa LTR MaLR -15 364 227 1 909 443 316 64 7 chr13 42504111 42504251 -77780061 - MTEa LTR MaLR -224 155 8 1 909 369 95 0 0 chr13 42504654 42504717 -77779595 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 909 501 293 65 32 chr13 42504722 42504877 -77779435 - B3A SINE B2 -35 160 1 1 909 415 326 44 123 chr13 42506573 42506940 -77777372 + ORR1E LTR MaLR 20 357 -2 1 909 428 310 0 41 chr13 42507138 42507259 -77777053 + PB1D10 SINE Alu 1 116 -1 1 909 246 132 0 0 chr13 42507260 42507313 -77776999 + (A)n Simple_repeat Simple_repeat 1 53 0 1 909 1085 183 13 90 chr13 42507365 42507665 -77776647 - Lx7 LINE L1 -1 7695 7419 1 909 344 121 17 0 chr13 42507692 42507705 -77776607 + HAL1-3A_ME LINE L1 1960 1972 -886 1 909 564 65 0 0 chr13 42507705 42507782 -77776530 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 909 344 121 17 0 chr13 42507782 42507826 -77776486 + HAL1-3A_ME LINE L1 1973 2017 -841 1 909 832 287 0 10 chr13 42508552 42508756 -77775556 - B3 SINE B2 -10 206 5 1 909 219 379 113 14 chr13 42509304 42509446 -77774866 + ID_B1 SINE B4 2 157 -67 2 909 348 328 0 46 chr13 42509447 42509578 -77774734 + B4A SINE B4 127 251 -41 2 909 812 292 73 40 chr13 42510572 42510847 -77773465 - B4 SINE B4 -8 284 1 2 909 790 215 122 48 chr13 42512052 42512138 -77772174 + MTEa LTR MaLR 113 194 -185 2 909 603 0 0 0 chr13 42512138 42512205 -77772107 + (TC)n Simple_repeat Simple_repeat 2 68 0 2 909 790 215 122 48 chr13 42512205 42512348 -77771964 + MTEa LTR MaLR 195 358 -21 2 909 2152 78 54 0 chr13 42512632 42512927 -77771385 + ORR1A2 LTR MaLR 17 327 0 2 909 242 116 23 0 chr13 42513010 42513053 -77771259 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 909 201 323 15 30 chr13 42513142 42513209 -77771103 + MER5A DNA MER1_type 124 189 0 2 909 448 274 22 54 chr13 42513533 42513604 -77770708 - Lx8 LINE L1 -132 7341 7277 2 909 2776 34 0 0 chr13 42513604 42513926 -77770386 + RLTRETN_Mm LTR ERVK 1 322 0 2 909 448 274 22 54 chr13 42513926 42514039 -77770273 - Lx8 LINE L1 -197 7276 7163 2 909 334 293 6 57 chr13 42514015 42514174 -77770138 + Lx8 LINE L1 7014 7164 -309 2 909 400 241 90 70 chr13 42514261 42514417 -77769895 + B3A SINE B2 40 198 0 3 909 1814 263 111 46 chr13 42515289 42515690 -77768622 - Lx8 LINE L1 -245 7228 6812 3 909 1635 187 157 77 chr13 42515690 42516111 -77768201 + MT2A LTR ERVL 3 461 -72 3 909 531 0 0 0 chr13 42516111 42516170 -77768142 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 3 909 1635 187 157 77 chr13 42516170 42516240 -77768072 + MT2A LTR ERVL 462 532 -1 3 909 1814 263 111 46 chr13 42516240 42516532 -77767780 - Lx8 LINE L1 -662 6811 6490 3 909 207 0 0 0 chr13 42516546 42516569 -77767743 + (TTTTG)n Simple_repeat Simple_repeat 5 27 0 3 909 354 338 97 0 chr13 42516944 42517089 -77767223 - RMER15 LTR ERVL -14 561 403 3 909 363 60 0 0 chr13 42517131 42517181 -77767131 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 909 366 61 0 0 chr13 42518324 42518373 -77765939 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 909 690 214 218 5 chr13 42518373 42518566 -77765746 - MTE2b LTR MaLR -143 236 3 3 909 239 314 29 0 chr13 42518723 42518825 -77765487 + L1MA9 LINE L1 6203 6307 -5 3 909 1202 68 0 0 chr13 42519310 42519457 -77764855 - B1_Mus2 SINE Alu 0 147 1 4 909 186 277 294 14 chr13 42519545 42519688 -77764624 + MIR SINE MIR 11 193 -69 4 909 370 347 128 72 chr13 42519723 42520058 -77764254 - MLT1F2 LTR MaLR -42 518 165 4 909 244 254 18 0 chr13 42520098 42520153 -77764159 - MLT1F2 LTR MaLR -499 70 15 4 909 364 240 72 0 chr13 42520590 42520692 -77763620 + RSINE1 SINE B4 84 281 -11 4 909 494 306 16 0 chr13 42520951 42521072 -77763240 + B3A SINE B2 20 142 -56 4 909 363 23 0 0 chr13 42521093 42521137 -77763175 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 909 3377 77 9 2 chr13 42521281 42521740 -77762572 + L1_Mus3 LINE L1 6174 6635 -3 4 909 320 306 31 31 chr13 42522030 42522158 -77762154 - MIRb SINE MIR -14 254 127 4 909 253 326 40 20 chr13 42522184 42522284 -77762028 + MER5B DNA MER1_type 11 112 -66 4 909 288 170 0 0 chr13 42522742 42522795 -77761517 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 4 909 527 349 32 87 chr13 42522816 42523161 -77761151 - ORR1E LTR MaLR -6 353 28 5 909 1656 46 5 5 chr13 42523165 42523385 -77760927 - L1_Mus2 LINE L1 -136 6430 6211 5 909 844 82 0 0 chr13 42523386 42523508 -77760804 + L1_Mus2 LINE L1 6444 6565 -1 5 909 522 293 11 33 chr13 42524159 42524339 -77759973 + MER5B DNA MER1_type 1 176 -2 5 909 282 294 106 50 chr13 42525084 42525245 -77759067 + MER121 Unknown Unknown 109 278 -134 5 909 219 263 0 0 chr13 42527135 42527192 -77757120 + A-rich Low_complexity Low_complexity 1 57 0 5 909 206 239 43 0 chr13 42528233 42528279 -77756033 - MIRc SINE MIR -118 150 103 5 909 24 0 0 0 chr13 42528599 42528623 -77755689 + AT_rich Low_complexity Low_complexity 1 24 0 5 909 522 0 0 0 chr13 42529034 42529092 -77755220 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 909 269 365 158 23 chr13 42530149 42530586 -77753726 + L2 LINE L2 2503 2998 -421 5 909 329 378 40 48 chr13 42530730 42530980 -77753332 - ORR1E LTR MaLR -111 248 1 5 909 190 304 0 0 chr13 42530981 42531037 -77753275 + L2 LINE L2 2994 3049 -370 5 909 383 344 94 11 chr13 42531739 42531930 -77752382 + MIR SINE MIR 29 235 -27 6 909 531 0 0 0 chr13 42532119 42532178 -77752134 + (CCCTAA)n Simple_repeat Simple_repeat 6 64 0 6 909 1789 228 38 20 chr13 42532190 42532565 -77751747 - MTD LTR MaLR -14 405 21 6 909 210 37 0 0 chr13 42532565 42532592 -77751720 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 909 1789 228 38 20 chr13 42532592 42532614 -77751698 - MTD LTR MaLR -399 20 1 6 909 25 31 0 0 chr13 42533232 42533264 -77751048 + AT_rich Low_complexity Low_complexity 1 32 0 6 909 1025 263 57 15 chr13 42534332 42534673 -77749639 + MTD LTR MaLR 1 409 -12 6 909 602 61 40 0 chr13 42534815 42534914 -77749398 - L1Md_F2 LINE L1 0 6582 6480 6 909 1485 6 6 0 chr13 42534914 42535091 -77749221 + L1Md_F2 LINE L1 5635 5812 -770 6 909 397 315 27 40 chr13 42535224 42535373 -77748939 - RSINE1 SINE B4 -17 148 2 6 909 759 218 0 0 chr13 42535413 42535555 -77748757 - B1_Mus1 SINE Alu -6 142 1 6 909 517 312 83 83 chr13 42535597 42536103 -77748209 - L1MEg LINE L1 -4520 1564 1059 7 909 406 344 100 67 chr13 42536387 42536807 -77747505 - LTR40a LTR ERVL -10 509 76 7 909 255 93 0 0 chr13 42537297 42537340 -77746972 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 909 288 148 0 0 chr13 42537340 42537401 -77746911 + (GA)n Simple_repeat Simple_repeat 2 62 0 7 909 396 0 0 0 chr13 42538917 42538961 -77745351 + (TATG)n Simple_repeat Simple_repeat 2 45 0 7 909 450 316 102 35 chr13 42539026 42539252 -77745060 - MLT1B LTR MaLR -32 358 118 7 909 545 333 14 5 chr13 42539989 42540200 -77744112 + Lx8 LINE L1 6969 7181 -292 7 909 204 340 78 20 chr13 42540637 42540739 -77743573 + MIR3 SINE MIR 89 196 -12 7 909 422 309 64 107 chr13 42542655 42543047 -77741265 + MLT1B LTR MaLR 11 385 -5 7 909 403 164 0 0 chr13 42543210 42543271 -77741041 - PB1D10 SINE Alu -29 88 28 7 909 186 103 0 0 chr13 42544593 42544622 -77739690 + (TC)n Simple_repeat Simple_repeat 2 30 0 8 909 354 23 0 0 chr13 42544625 42544668 -77739644 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 8 909 477 0 0 0 chr13 42544673 42544726 -77739586 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 909 463 231 30 9 chr13 42544729 42544848 -77739464 + PB1D7 SINE Alu 9 120 0 8 909 450 259 0 18 chr13 42544924 42545034 -77739278 - PB1D10 SINE Alu -9 108 1 8 909 302 372 108 24 chr13 42545449 42545661 -77738651 + Tigger5 DNA MER2_type 13 242 -2164 8 909 22 0 0 0 chr13 42546648 42546670 -77737642 + AT_rich Low_complexity Low_complexity 1 22 0 8 909 21 36 0 0 chr13 42547709 42547737 -77736575 + AT_rich Low_complexity Low_complexity 1 28 0 8 909 181 294 43 14 chr13 42547764 42547833 -77736479 - MIRc SINE MIR -147 121 51 8 909 477 50 0 0 chr13 42548410 42548470 -77735842 + (GA)n Simple_repeat Simple_repeat 1 60 0 8 909 227 350 27 24 chr13 42549513 42549611 -77734701 + MIRc SINE MIR 17 119 -149 9 909 184 287 46 138 chr13 42549631 42549740 -77734572 - L2a LINE L2 -8 3418 3320 9 909 304 329 148 18 chr13 42549887 42550104 -77734208 + MLT1D LTR MaLR 3 247 -258 9 909 279 276 11 33 chr13 42550291 42550381 -77733931 + MLT1D LTR MaLR 380 467 0 9 909 295 304 33 0 chr13 42550976 42551068 -77733244 - L2a LINE L2 -42 3384 3290 9 909 727 337 5 20 chr13 42551208 42551411 -77732901 - B4 SINE B4 -76 216 17 9 909 207 302 62 48 chr13 42551480 42551626 -77732686 - L2a LINE L2 -309 3066 2919 9 909 419 349 146 47 chr13 42552147 42552571 -77731741 - MLT1C LTR MaLR 0 467 2 9 909 269 292 257 0 chr13 42552573 42552717 -77731595 - L2a LINE L2 -1098 2321 2141 9 909 554 63 13 0 chr13 42552880 42552959 -77731353 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 9 909 641 314 109 11 chr13 42554027 42554301 -77730011 + MLT1A0 LTR MaLR 65 365 0 9 909 438 20 0 0 chr13 42554438 42554489 -77729823 + (TC)n Simple_repeat Simple_repeat 1 51 0 9 909 444 135 0 0 chr13 42555108 42555182 -77729130 + (TCTCCC)n Simple_repeat Simple_repeat 6 79 0 9 909 360 0 0 0 chr13 42555193 42555233 -77729079 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 909 209 224 29 15 chr13 42558018 42558086 -77726226 + GA-rich Low_complexity Low_complexity 4 72 0 1 909 204 40 0 0 chr13 42558130 42558155 -77726157 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1 909 941 235 18 48 chr13 42558901 42559129 -77725183 - ID_B1 SINE B4 -3 221 1 1 909 206 95 24 0 chr13 42559431 42559473 -77724839 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 909 820 183 0 34 chr13 42559538 42559685 -77724627 - B1_Mus1 SINE Alu -6 142 1 1 909 24 0 0 0 chr13 42559917 42559941 -77724371 + AT_rich Low_complexity Low_complexity 1 24 0 1 909 783 0 0 0 chr13 42559948 42560035 -77724277 + (GAA)n Simple_repeat Simple_repeat 1 87 0 1 909 624 282 130 0 chr13 42560172 42560487 -77723825 + L1MA4A LINE L1 4511 4866 -1277 1 909 769 308 18 15 chr13 42560488 42560815 -77723497 + L1MA4A LINE L1 5024 5351 -792 1 909 468 189 0 18 chr13 42560823 42560936 -77723376 - Lx9 LINE L1 -3 7641 7531 1 909 3108 36 11 37 chr13 42560993 42561368 -77722944 + RLTR10B2 LTR ERVK 1 365 0 1 909 1098 99 7 0 chr13 42561372 42561513 -77722799 - B1_Mus1 SINE Alu -2 146 5 1 909 1117 317 49 11 chr13 42561552 42562126 -77722186 + L1MA4A LINE L1 5335 5930 -373 1 909 675 62 0 0 chr13 42562641 42562738 -77721574 + (TC)n Simple_repeat Simple_repeat 2 98 0 1 909 194 91 0 29 chr13 42562738 42562771 -77721541 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 909 21 36 0 0 chr13 42562791 42562819 -77721493 + AT_rich Low_complexity Low_complexity 1 28 0 1 909 504 284 56 31 chr13 42562853 42563013 -77721299 + RSINE1 SINE B4 2 165 0 1 909 462 296 189 35 chr13 42563740 42563999 -77720313 + MLT1A0 LTR MaLR 67 365 0 1 909 358 359 88 32 chr13 42564000 42564340 -77719972 + L2a LINE L2 1828 2186 -1233 1 909 811 339 52 20 chr13 42564378 42564784 -77719528 + MTD LTR MaLR 1 419 0 1 909 518 303 27 27 chr13 42564980 42565126 -77719186 - ID_B1 SINE B4 -3 221 76 1 909 346 322 188 20 chr13 42565161 42565703 -77718609 + L2a LINE L2 2500 3142 -284 1 909 460 287 52 0 chr13 42566733 42566907 -77717405 - L1M2 LINE L1 -591 5706 5524 1 909 264 319 58 47 chr13 42566968 42567159 -77717153 - L1_Mur3 LINE L1 -681 5199 5007 1 909 544 175 16 8 chr13 42567391 42567512 -77716800 + CT-rich Low_complexity Low_complexity 2 123 0 1 909 399 41 0 0 chr13 42567512 42567561 -77716751 + (TCCC)n Simple_repeat Simple_repeat 4 52 0 1 909 204 234 0 0 chr13 42567615 42567662 -77716650 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 909 890 96 0 0 chr13 42568607 42568732 -77715580 + B2_Mm2 SINE B2 1 125 -70 1 909 558 0 0 0 chr13 42568759 42568821 -77715491 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 909 1081 79 84 12 chr13 42568903 42569070 -77715242 + L1Md_F3 LINE L1 6406 6584 0 1 909 383 306 126 121 chr13 42569100 42569251 -77715061 + MTD LTR MaLR 8 205 -214 1 909 2036 176 34 94 chr13 42569251 42569697 -77714615 + MTD LTR MaLR 1 419 0 1 909 383 284 92 121 chr13 42569697 42569916 -77714396 + MTD LTR MaLR 206 419 0 1 909 194 62 31 0 chr13 42570082 42570114 -77714198 + (GA)n Simple_repeat Simple_repeat 1 33 0 1 909 1233 248 39 45 chr13 42571705 42572064 -77712248 + MTEa LTR MaLR 16 372 -7 1 909 1270 226 131 13 chr13 42572702 42573075 -77711237 - MTD LTR MaLR 0 419 3 1 909 384 275 43 75 chr13 42574371 42574532 -77709780 + LTR88a LTR Gypsy 642 797 -19 1 909 303 279 0 48 chr13 42574704 42574787 -77709525 + RSINE1 SINE B4 83 161 -4 1 909 462 351 104 8 chr13 42574987 42575237 -77709075 - LTR40b LTR ERVL -186 276 3 1 909 1045 306 56 19 chr13 42575260 42575580 -77708732 + MTEa LTR MaLR 3 334 -45 1 909 233 364 0 0 chr13 42575813 42575890 -77708422 - PB1D10 SINE Alu -7 110 34 1 909 691 203 0 33 chr13 42576260 42576505 -77707807 + (TG)n Simple_repeat Simple_repeat 1 236 0 1 909 497 264 28 7 chr13 42576616 42576757 -77707555 - MTD LTR MaLR 0 419 276 1 909 613 347 31 31 chr13 42576807 42577063 -77707249 - MTD LTR MaLR -146 273 18 1 909 220 351 40 62 chr13 42577501 42577677 -77706635 + MIR SINE MIR 60 231 -31 1 909 266 226 0 0 chr13 42578884 42578946 -77705366 + MLT1B LTR MaLR 192 253 -137 1 909 2235 104 6 0 chr13 42579363 42579680 -77704632 - ORR1A2 LTR MaLR -8 319 1 1 909 609 14 0 0 chr13 42579864 42579934 -77704378 + (GA)n Simple_repeat Simple_repeat 1 70 0 1 909 405 0 0 0 chr13 42581667 42581712 -77702600 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 909 6772 85 2 2 chr13 42581891 42582797 -77701515 + L1_Mus3 LINE L1 5731 6636 -2 1 909 329 280 144 0 chr13 42583015 42583140 -77701172 - ID_B1 SINE B4 -1 223 81 1 909 3185 148 45 13 chr13 42583803 42584352 -77699960 - RLTR12A LTR ERVK 0 568 2 1 909 760 246 16 63 chr13 42586821 42587012 -77697300 + B3A SINE B2 1 182 -16 1 909 321 89 0 0 chr13 42587021 42587066 -77697246 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 909 506 16 0 16 chr13 42587065 42587129 -77697183 + (TA)n Simple_repeat Simple_repeat 1 63 0 1 909 254 297 14 0 chr13 42587962 42588036 -77696276 + PB1D10 SINE Alu 25 99 -18 1 909 265 296 10 0 chr13 42588658 42588724 -77695588 + PB1D10 SINE Alu 3 57 -60 1 909 1877 171 167 22 chr13 42590877 42591325 -77692987 + Lx2B LINE L1 6480 6992 -8 1 909 398 281 81 148 chr13 42591440 42591825 -77692487 + ORR1E LTR MaLR 1 359 0 1 909 695 92 9 0 chr13 42592402 42592511 -77691801 + (CA)n Simple_repeat Simple_repeat 2 111 0 1 909 1112 109 0 20 chr13 42592570 42592720 -77691592 + B1_Mus1 SINE Alu 2 148 0 1 909 1562 91 0 0 chr13 42594337 42594740 -77689572 + L1_Mus1 LINE L1 6368 6567 0 1 909 220 222 0 18 chr13 42594880 42594935 -77689377 + (TATG)n Simple_repeat Simple_repeat 1 54 0 1 909 282 108 46 0 chr13 42594939 42595004 -77689308 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 909 482 291 207 4 chr13 42595004 42595246 -77689066 - B4A SINE B4 0 292 2 1 909 256 343 55 9 chr13 42595657 42595766 -77688546 + MamRep605 Unknown Unknown 482 595 -281 1 909 180 0 0 0 chr13 42596638 42596658 -77687654 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1 909 650 261 0 0 chr13 42596731 42596865 -77687447 - ID_B1 SINE B4 -9 215 82 1 909 239 242 38 68 chr13 42596992 42597125 -77687187 - Charlie2b DNA MER1_type -243 2539 2411 1 909 2082 310 144 8 chr13 42597141 42598080 -77686232 - Lx8 LINE L1 -28 7445 6380 1 909 1106 113 6 0 chr13 42598082 42598241 -77686071 - ORR1A4 LTR MaLR -169 160 1 1 910 513 191 7 34 chr13 42598476 42598622 -77685690 + (CATATA)n Simple_repeat Simple_repeat 3 144 0 1 910 316 53 0 0 chr13 42598624 42598662 -77685650 - HAL1-3A_ME LINE L1 -846 2012 1975 1 910 2108 271 17 21 chr13 42598663 42599194 -77685118 - Lx5 LINE L1 -25 7025 6497 1 910 1589 217 12 41 chr13 42599191 42599749 -77684563 - Lx5 LINE L1 -784 6274 5747 1 910 657 0 0 0 chr13 42599749 42599822 -77684490 + (TTCTC)n Simple_repeat Simple_repeat 2 74 0 1 910 302 329 7 13 chr13 42599822 42599847 -77684465 - L1MB1 LINE L1 -411 5778 5754 1 910 240 158 0 0 chr13 42599853 42599910 -77684402 + T-rich Low_complexity Low_complexity 1 57 0 1 910 1212 89 7 0 chr13 42599911 42600057 -77684255 - B1_Mus2 SINE Alu 0 147 1 1 910 627 260 87 75 chr13 42600418 42600923 -77683389 + L1MA5 LINE L1 5636 6149 -1547 1 910 361 246 147 31 chr13 42600960 42601176 -77683136 + Lx3C LINE L1 5537 5838 -1138 1 910 2573 184 54 35 chr13 42601187 42601705 -77682607 + RLTR11A LTR ERVK 1 528 0 1 910 4466 128 25 16 chr13 42602071 42602738 -77681574 - Lx LINE L1 0 6654 5982 1 910 1120 285 97 45 chr13 42603039 42604473 -77679839 + L1MB3 LINE L1 4763 6291 0 1 910 377 268 80 30 chr13 42604526 42604626 -77679686 + B3A SINE B2 1 105 -93 1 910 239 191 16 0 chr13 42604656 42604719 -77679593 + GA-rich Low_complexity Low_complexity 2 65 0 1 910 625 319 52 26 chr13 42605247 42605465 -77678847 + B4A SINE B4 50 274 -18 1 910 216 0 0 0 chr13 42605465 42605489 -77678823 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 910 625 319 52 26 chr13 42605489 42605502 -77678810 + B4A SINE B4 275 287 -5 1 910 1906 304 33 40 chr13 42605637 42606268 -77678044 - Lx8 LINE L1 -578 6895 6269 1 910 361 0 0 39 chr13 42606296 42606347 -77677965 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 910 216 0 0 0 chr13 42606658 42606682 -77677630 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 910 378 179 10 21 chr13 42606959 42607056 -77677256 + GA-rich Low_complexity Low_complexity 2 97 0 1 910 242 115 19 0 chr13 42608019 42608071 -77676241 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 910 431 323 75 0 chr13 42608089 42608222 -77676090 - RSINE1 SINE B4 -2 163 21 1 910 436 185 50 161 chr13 42608469 42608606 -77675706 - Lx7 LINE L1 0 7696 7577 1 910 561 42 0 0 chr13 42608606 42608678 -77675634 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 910 436 185 50 161 chr13 42608678 42608701 -77675611 - Lx7 LINE L1 -120 7576 7554 1 910 327 127 0 0 chr13 42609138 42609201 -77675111 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 1 910 680 130 35 12 chr13 42609226 42609397 -77674915 + (TAGA)n Simple_repeat Simple_repeat 4 178 0 1 910 980 174 38 27 chr13 42609517 42609700 -77674612 - B2_Mm2 SINE B2 -9 186 2 1 910 973 238 26 158 chr13 42609702 42610157 -77674155 - RLTR11B LTR ERVK -58 395 1 1 910 388 281 16 8 chr13 42610157 42610279 -77674033 + (TAGA)n Simple_repeat Simple_repeat 3 125 0 1 910 310 262 122 0 chr13 42610383 42610490 -77673822 + L1M2 LINE L1 5401 5520 -780 1 910 321 151 111 44 chr13 42610504 42610594 -77673718 + L1M2 LINE L1 5576 5671 -620 1 910 225 271 57 34 chr13 42610702 42610790 -77673522 + Lx8 LINE L1 5812 5901 -1572 1 910 320 346 12 48 chr13 42611233 42611400 -77672912 - MER45C DNA Tip100 -785 168 8 1 910 752 260 0 0 chr13 42611540 42611690 -77672622 + B3A SINE B2 1 150 -48 1 910 552 30 0 0 chr13 42611693 42611759 -77672553 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 910 219 273 26 13 chr13 42611981 42612059 -77672253 + MER5B DNA MER1_type 89 167 -11 2 910 848 313 92 49 chr13 42612287 42613313 -77670999 - L1ME2z LINE L1 -277 6167 5094 2 910 311 154 26 26 chr13 42613343 42613456 -77670856 + (TCTCTG)n Simple_repeat Simple_repeat 2 114 0 2 910 327 349 9 9 chr13 42614691 42614798 -77669514 - MER5A DNA MER1_type -64 125 19 2 910 238 329 82 76 chr13 42616448 42616632 -77667680 - ORR1E LTR MaLR -98 261 77 2 910 225 246 0 34 chr13 42616766 42616825 -77667487 + (CACCC)n Simple_repeat Simple_repeat 3 59 0 2 910 397 291 12 24 chr13 42616832 42617001 -77667311 + (CATCC)n Simple_repeat Simple_repeat 1 167 0 2 910 238 296 27 34 chr13 42616945 42617092 -77667220 + (CACTC)n Simple_repeat Simple_repeat 3 148 0 2 910 2814 84 39 13 chr13 42617161 42617547 -77666765 + MTA_Mm LTR MaLR 1 396 0 2 910 1113 79 0 0 chr13 42617553 42617692 -77666620 - B1_Mus1 SINE Alu -9 139 1 2 910 181 98 49 0 chr13 42617909 42617950 -77666362 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 2 910 227 217 141 0 chr13 42617980 42618072 -77666240 + Tigger7 DNA MER2_type 2245 2349 -142 2 910 1592 176 22 180 chr13 42618072 42618528 -77665784 + ORR1C2 LTR MaLR 1 384 0 2 910 495 238 59 37 chr13 42618529 42618664 -77665648 + ORR1C2-int LTR MaLR 2 139 -1231 2 910 919 131 0 27 chr13 42618632 42618781 -77665531 + B1_Mur4 SINE Alu 6 150 0 2 910 411 21 0 0 chr13 42618828 42618876 -77665436 + (GA)n Simple_repeat Simple_repeat 2 49 0 2 910 2074 224 40 23 chr13 42618876 42619405 -77664907 + ORR1C2-int LTR MaLR 94 631 -878 2 910 249 307 0 26 chr13 42619734 42619811 -77664501 + ID4_ SINE ID 2 76 -7 2 910 513 0 0 0 chr13 42620039 42620096 -77664216 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 910 507 325 0 38 chr13 42620818 42620975 -77663337 + B4A SINE B4 120 270 -22 2 910 411 56 0 0 chr13 42620983 42621037 -77663275 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 910 297 0 0 0 chr13 42621037 42621069 -77663243 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 910 219 196 54 0 chr13 42621658 42621714 -77662598 + CT-rich Low_complexity Low_complexity 1 59 0 2 910 21 0 0 0 chr13 42621907 42621928 -77662384 + AT_rich Low_complexity Low_complexity 1 21 0 2 910 207 0 0 0 chr13 42622333 42622356 -77661956 + (A)n Simple_repeat Simple_repeat 1 23 0 2 910 2247 138 21 0 chr13 42624043 42624421 -77659891 + ORR1B1 LTR MaLR 1 386 -8 2 910 664 312 146 16 chr13 42624430 42625016 -77659296 + L1MA4 LINE L1 5090 5748 -132 2 910 225 0 0 0 chr13 42625016 42625041 -77659271 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 910 924 9 0 0 chr13 42625041 42625145 -77659167 + (GA)n Simple_repeat Simple_repeat 2 106 0 2 910 664 296 32 23 chr13 42625145 42625274 -77659038 + L1MA4 LINE L1 5749 5930 -370 2 910 678 25 0 0 chr13 42625343 42625423 -77658889 + (GGAA)n Simple_repeat Simple_repeat 1 80 0 2 910 228 337 98 39 chr13 42625864 42625966 -77658346 + MER58A DNA MER1_type 3 110 -114 2 910 529 220 121 0 chr13 42626280 42626412 -77657900 + B1_Mur1 SINE Alu 2 149 0 2 910 192 97 0 0 chr13 42626761 42626792 -77657520 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 910 424 268 12 50 chr13 42629102 42629263 -77655049 - RLTR11B LTR ERVK -26 427 273 2 910 794 255 0 115 chr13 42629300 42629623 -77654689 - RLTR11B LTR ERVK -167 286 1 2 910 325 344 31 0 chr13 42629851 42629979 -77654333 - B4A SINE B4 -77 215 84 2 910 2702 117 22 31 chr13 42630716 42631173 -77653139 - Lx2 LINE L1 0 6997 6545 2 910 312 297 84 23 chr13 42631442 42631573 -77652739 - MIRb SINE MIR -82 186 48 2 910 230 283 0 11 chr13 42632655 42632748 -77651564 + (CA)n Simple_repeat Simple_repeat 2 93 0 2 910 398 253 32 0 chr13 42634003 42634093 -77650219 + B4 SINE B4 4 96 -196 2 910 340 281 96 107 chr13 42634093 42634280 -77650032 + B3A SINE B2 1 185 -13 2 910 486 0 0 0 chr13 42634300 42634354 -77649958 + (GA)n Simple_repeat Simple_repeat 1 54 0 2 910 446 301 128 9 chr13 42635196 42635407 -77648905 - Tigger5 DNA MER2_type -2169 237 2 2 910 585 296 11 16 chr13 42635638 42635820 -77648492 + Lx7 LINE L1 7095 7275 -421 2 910 324 0 0 0 chr13 42635820 42635856 -77648456 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 910 590 259 23 17 chr13 42635872 42636049 -77648263 - B3A SINE B2 -16 182 5 2 910 196 171 0 89 chr13 42636053 42636098 -77648214 - MER5A DNA MER1_type -114 75 35 2 910 1525 162 59 49 chr13 42636343 42636667 -77647645 - ORR1A4 LTR MaLR -2 327 1 2 910 324 0 0 0 chr13 42637119 42637155 -77647157 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 910 336 325 24 81 chr13 42637630 42637841 -77646471 - MER20 DNA MER1_type -1 218 20 2 910 367 135 45 0 chr13 42638402 42638491 -77645821 + (TCTCTG)n Simple_repeat Simple_repeat 1 93 0 2 910 209 246 52 17 chr13 42638685 42638743 -77645569 - MIRc SINE MIR -60 208 149 2 910 948 291 143 19 chr13 42638822 42639291 -77645021 - L1MB2 LINE L1 -55 6116 5590 2 910 429 292 58 0 chr13 42639309 42639429 -77644883 - RSINE1 SINE B4 -37 128 2 2 910 205 49 0 89 chr13 42639913 42639958 -77644354 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 2 910 267 31 0 0 chr13 42640629 42640661 -77643651 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 910 921 265 14 0 chr13 42640758 42640969 -77643343 + B3 SINE B2 3 216 0 2 910 1166 62 7 0 chr13 42640994 42641138 -77643174 + B1_Mus1 SINE Alu 2 146 -2 2 910 189 0 0 0 chr13 42641322 42641343 -77642969 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 910 22 0 0 0 chr13 42641511 42641533 -77642779 + AT_rich Low_complexity Low_complexity 1 22 0 2 910 775 236 11 11 chr13 42641878 42642062 -77642250 - B3 SINE B2 -32 184 1 2 910 382 251 83 33 chr13 42642274 42642436 -77641876 - MER58B DNA MER1_type -41 174 4 2 910 305 316 134 72 chr13 42642506 42642813 -77641499 + HAL1 LINE L1 1731 2056 -451 2 910 24 53 0 0 chr13 42644277 42644315 -77639997 + AT_rich Low_complexity Low_complexity 1 38 0 2 910 324 320 31 25 chr13 42645177 42645337 -77638975 - MER103 DNA DNA -1 165 5 2 910 200 100 25 0 chr13 42645415 42645455 -77638857 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 910 3208 78 26 0 chr13 42646710 42647136 -77637176 + L1_Mus3 LINE L1 6202 6638 0 2 910 864 200 0 0 chr13 42647144 42647324 -77636988 + GA-rich Low_complexity Low_complexity 1 180 0 2 910 252 0 0 0 chr13 42647326 42647354 -77636958 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 2 910 683 247 136 49 chr13 42647495 42647840 -77636472 + Charlie1 DNA MER1_type 2391 2765 -16 2 910 1863 192 40 12 chr13 42647973 42648378 -77635934 + MTC LTR MaLR 1 416 -5 2 910 181 241 138 92 chr13 42648686 42648773 -77635539 - L2b LINE L2 0 3375 3285 2 910 234 150 0 0 chr13 42648909 42648949 -77635363 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 910 22 0 0 0 chr13 42648957 42648979 -77635333 + AT_rich Low_complexity Low_complexity 1 22 0 2 910 360 0 0 0 chr13 42649782 42649822 -77634490 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 910 540 0 0 0 chr13 42649822 42649882 -77634430 + (GA)n Simple_repeat Simple_repeat 1 60 0 2 910 244 262 0 23 chr13 42650813 42650899 -77633413 + (TA)n Simple_repeat Simple_repeat 2 85 0 2 910 23 0 0 0 chr13 42651378 42651401 -77632911 + AT_rich Low_complexity Low_complexity 1 23 0 2 910 312 279 144 0 chr13 42651436 42651540 -77632772 + PB1 SINE Alu 7 125 -2 2 910 243 235 20 0 chr13 42651560 42651611 -77632701 + BC1_Mm scRNA scRNA 17 68 -84 2 910 252 0 0 0 chr13 42651618 42651646 -77632666 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 910 212 239 0 53 chr13 42652452 42652527 -77631785 + CT-rich Low_complexity Low_complexity 1 71 0 2 910 216 238 0 0 chr13 42652732 42652795 -77631517 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 910 375 206 88 53 chr13 42653469 42653582 -77630730 + PB1 SINE Alu 4 120 -7 2 910 1288 294 14 0 chr13 42655981 42656348 -77627964 - MTE2b LTR MaLR -7 372 1 2 910 258 32 0 0 chr13 42656414 42656445 -77627867 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 910 681 299 108 38 chr13 42656531 42656847 -77627465 - MTEa LTR MaLR -39 340 3 2 910 198 0 0 0 chr13 42657780 42657802 -77626510 + (A)n Simple_repeat Simple_repeat 1 22 0 2 910 248 173 161 23 chr13 42658442 42658529 -77625783 + B1F1 SINE Alu 2 107 -10 2 910 195 42 0 0 chr13 42659665 42659689 -77624623 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 910 203 300 14 0 chr13 42659703 42659773 -77624539 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 910 438 274 151 45 chr13 42659791 42660059 -77624253 - B4A SINE B4 -3 289 2 2 910 845 108 14 0 chr13 42660284 42660423 -77623889 + (TCCC)n Simple_repeat Simple_repeat 2 142 0 2 910 186 179 0 0 chr13 42660431 42660487 -77623825 + (TCTG)n Simple_repeat Simple_repeat 2 57 0 2 910 204 125 0 0 chr13 42660589 42660621 -77623691 + (A)n Simple_repeat Simple_repeat 1 32 0 2 910 339 25 0 0 chr13 42663387 42663427 -77620885 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 910 631 250 54 11 chr13 42663427 42663613 -77620699 + B3 SINE B2 17 210 -6 2 910 450 0 0 0 chr13 42663637 42663687 -77620625 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 910 604 322 156 20 chr13 42663750 42663901 -77620411 + Lx9 LINE L1 7062 7218 -426 2 910 315 0 0 0 chr13 42663901 42663936 -77620376 + (TTTTG)n Simple_repeat Simple_repeat 4 38 0 2 910 1128 76 0 0 chr13 42663936 42664080 -77620232 - B1_Mus1 SINE Alu -4 144 1 2 910 604 322 156 20 chr13 42664080 42664421 -77619891 + Lx9 LINE L1 7219 7621 -23 2 910 221 294 0 0 chr13 42664565 42664650 -77619662 + A-rich Low_complexity Low_complexity 1 85 0 2 910 445 266 208 14 chr13 42666327 42666620 -77617692 + L1M5 LINE L1 3352 3701 -2445 2 910 213 121 0 0 chr13 42667289 42667322 -77616990 + (CGA)n Simple_repeat Simple_repeat 2 34 0 2 910 323 342 96 40 chr13 42667716 42667966 -77616346 + L1M5 LINE L1 4606 4869 -1277 2 910 228 234 10 21 chr13 42668017 42668113 -77616199 + (TA)n Simple_repeat Simple_repeat 2 96 0 3 910 474 18 0 0 chr13 42668479 42668534 -77615778 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 910 405 156 0 0 chr13 42669995 42670091 -77614221 + CT-rich Low_complexity Low_complexity 2 97 0 3 910 417 20 0 0 chr13 42670091 42670141 -77614171 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 910 915 272 104 14 chr13 42670614 42670961 -77613351 - Lx8 LINE L1 -281 7192 6815 3 910 259 259 89 11 chr13 42671107 42671197 -77613115 - RSINE1 SINE B4 -1 164 68 3 910 1210 56 0 27 chr13 42671885 42672070 -77612242 + (TCC)n Simple_repeat Simple_repeat 1 180 0 3 910 1125 50 0 0 chr13 42672563 42672704 -77611608 + B2_Mm2 SINE B2 2 142 -53 3 910 414 258 2 38 chr13 42673572 42673694 -77610618 - B1F1 SINE Alu -1 148 3 3 910 201 246 0 0 chr13 42674515 42674580 -77609732 + (CA)n Simple_repeat Simple_repeat 1 65 0 3 910 220 324 106 34 chr13 42674912 42675177 -77609135 + L2 LINE L2 2609 2892 -527 3 910 207 250 0 0 chr13 42676173 42676217 -77608095 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 910 565 224 0 22 chr13 42676218 42676401 -77607911 + (TATATG)n Simple_repeat Simple_repeat 1 179 0 3 910 487 238 6 12 chr13 42676412 42676574 -77607738 + (TATG)n Simple_repeat Simple_repeat 2 162 0 3 910 686 243 80 34 chr13 42676593 42676768 -77607544 - B4A SINE B4 -2 290 108 3 910 249 218 36 0 chr13 42676782 42676837 -77607475 - ORR1A2 LTR MaLR -270 57 1 3 910 8236 142 177 19 chr13 42676837 42678533 -77605779 - ORR1A2-int LTR MaLR 0 1963 1 3 910 2254 114 3 92 chr13 42678533 42678890 -77605422 - ORR1A2 LTR MaLR 0 327 3 3 910 516 45 0 0 chr13 42679230 42679297 -77605015 + (GA)n Simple_repeat Simple_repeat 2 68 0 3 910 446 303 159 59 chr13 42679606 42679978 -77604334 - L2 LINE L2 -508 2911 2503 3 910 320 340 120 3 chr13 42680239 42680357 -77603955 + B1F SINE Alu 1 129 -20 3 910 404 250 85 19 chr13 42680706 42680812 -77603500 - PB1D7 SINE Alu -4 116 4 3 910 609 40 0 0 chr13 42681461 42681537 -77602775 + (TG)n Simple_repeat Simple_repeat 2 77 0 3 910 209 310 144 17 chr13 42681599 42681717 -77602595 + MIR3 SINE MIR 4 136 -72 3 910 333 100 0 0 chr13 42682098 42682148 -77602164 + (CAT)n Simple_repeat Simple_repeat 2 51 0 3 910 352 285 186 7 chr13 42682180 42682376 -77601936 + MIRb SINE MIR 14 236 -32 3 910 889 195 135 16 chr13 42683041 42683234 -77601078 + B3 SINE B2 1 216 0 3 910 562 299 7 20 chr13 42683274 42683421 -77600891 + B1F SINE Alu 3 147 -2 3 910 399 141 0 0 chr13 42683924 42684002 -77600310 + (CA)n Simple_repeat Simple_repeat 2 79 0 3 910 889 254 25 5 chr13 42684608 42684810 -77599502 - B3 SINE B2 -10 206 1 3 910 324 48 0 0 chr13 42686179 42686221 -77598091 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 3 910 303 302 44 69 chr13 42686221 42686381 -77597931 + HAL1-3A_ME LINE L1 2284 2439 -419 3 910 363 325 77 6 chr13 42687022 42687192 -77597120 - MER2 DNA MER2_type -8 337 156 3 910 614 156 0 91 chr13 42687198 42687396 -77596916 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 910 274 338 0 13 chr13 42689871 42689946 -77594366 + ID4_ SINE ID 9 82 -1 3 910 433 255 79 14 chr13 42690092 42690325 -77593987 + L1ME2 LINE L1 5318 5576 -2419 3 910 548 309 89 29 chr13 42690855 42691226 -77593086 + L1ME2 LINE L1 5643 6049 -113 3 910 331 260 58 39 chr13 42691289 42691437 -77592875 + L1MEa LINE L1 89 234 -5860 3 910 908 93 8 8 chr13 42691594 42691724 -77592588 + B2_Mm1t SINE B2 1 130 -63 3 910 1034 93 53 7 chr13 42691721 42691873 -77592439 + B2_Mm1t SINE B2 21 179 -14 3 910 339 146 0 18 chr13 42691924 42691980 -77592332 + B2_Mm2 SINE B2 47 101 -94 3 910 866 113 14 7 chr13 42692052 42692195 -77592117 + URR1A DNA MER1_type 83 226 0 3 910 320 322 76 36 chr13 42692459 42692736 -77591576 + L1MEa LINE L1 706 993 -5207 3 910 809 47 9 0 chr13 42693061 42693167 -77591145 + (TC)n Simple_repeat Simple_repeat 2 108 0 3 910 229 333 9 43 chr13 42694868 42694984 -77589328 + GA-rich Low_complexity Low_complexity 4 115 0 3 910 345 145 0 0 chr13 42695528 42695590 -77588722 + (CAGGG)n Simple_repeat Simple_repeat 3 64 0 3 910 304 216 0 0 chr13 42695631 42695682 -77588630 + B3 SINE B2 3 53 -163 3 910 3257 243 103 97 chr13 42695682 42696978 -77587334 + Lx5 LINE L1 5731 7035 -15 3 910 670 304 36 40 chr13 42697641 42697964 -77586348 - MLT1F2 LTR MaLR -47 577 263 3 910 391 284 11 0 chr13 42698352 42698440 -77585872 + 5S rRNA rRNA 2 90 -31 3 910 24 32 0 0 chr13 42698582 42698613 -77585699 + AT_rich Low_complexity Low_complexity 1 31 0 3 910 243 0 0 0 chr13 42699368 42699395 -77584917 + (TTTC)n Simple_repeat Simple_repeat 1 27 0 3 910 979 142 0 11 chr13 42699396 42699574 -77584738 + CT-rich Low_complexity Low_complexity 2 177 0 3 910 719 100 0 9 chr13 42699575 42699686 -77584626 + (TCC)n Simple_repeat Simple_repeat 3 112 0 3 910 403 296 167 26 chr13 42700083 42700446 -77583866 + L1MB8 LINE L1 5655 6058 -120 3 910 1737 318 60 64 chr13 42700565 42701136 -77583176 + Lx8 LINE L1 6017 6555 -918 3 910 294 29 0 0 chr13 42701136 42701171 -77583141 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 910 1737 318 60 64 chr13 42701171 42701542 -77582770 + Lx8 LINE L1 6556 6956 -517 3 910 891 156 0 0 chr13 42701542 42701702 -77582610 + (CA)n Simple_repeat Simple_repeat 1 160 0 3 910 1361 260 65 32 chr13 42701707 42702168 -77582144 + Lx8 LINE L1 6970 7445 -28 3 910 271 286 20 0 chr13 42702221 42702319 -77581993 + L1MB8 LINE L1 6071 6170 -8 3 910 486 285 151 44 chr13 42703580 42703796 -77580516 - RMER10A LTR ERVL -16 426 189 3 910 4686 58 33 3 chr13 42703796 42704368 -77579944 + L1_Mus3 LINE L1 6043 6631 -7 3 910 486 285 151 44 chr13 42704368 42704536 -77579776 - RMER10A LTR ERVL -254 188 1 3 910 249 162 29 14 chr13 42704839 42704908 -77579404 + (TATATG)n Simple_repeat Simple_repeat 6 75 0 3 910 199 366 50 0 chr13 42705705 42705806 -77578506 + MIR SINE MIR 69 174 -88 3 910 324 0 0 0 chr13 42706048 42706084 -77578228 + (TTC)n Simple_repeat Simple_repeat 1 36 0 3 910 555 16 0 0 chr13 42706084 42706148 -77578164 + (TTA)n Simple_repeat Simple_repeat 3 66 0 3 910 214 365 31 10 chr13 42706182 42706279 -77578033 - RSINE1 SINE B4 -65 100 2 3 910 825 244 50 5 chr13 42707024 42707222 -77577090 + B3 SINE B2 1 207 -9 3 910 492 256 124 0 chr13 42707260 42707381 -77576931 + RSINE1 SINE B4 4 139 -26 3 910 806 278 30 1 chr13 42707440 42707722 -77576590 + L1MA4 LINE L1 5632 5927 -373 3 910 1252 269 160 39 chr13 42707979 42708791 -77575521 + L1MA9 LINE L1 4450 5359 -784 3 910 437 274 71 43 chr13 42708791 42708932 -77575380 + ID_B1 SINE B4 80 224 0 3 910 638 299 95 47 chr13 42708955 42709184 -77575128 + B4 SINE B4 28 275 -17 3 910 399 73 0 0 chr13 42709184 42709239 -77575073 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 910 638 299 95 47 chr13 42709239 42709262 -77575050 + B4 SINE B4 276 292 0 3 910 1415 283 85 38 chr13 42709377 42710211 -77574101 + L1MA9 LINE L1 5373 6245 -67 3 910 3009 192 97 18 chr13 42710199 42710882 -77573430 + Lx9 LINE L1 6907 7643 -1 3 910 191 250 125 0 chr13 42712250 42712298 -77572014 + MIRm SINE MIR 82 135 -141 3 910 411 269 191 30 chr13 42713734 42713933 -77570379 - HAL1-3A_ME LINE L1 -654 2204 1974 3 910 265 311 60 15 chr13 42716056 42716190 -77568122 - MER53 DNA hAT -29 164 25 3 910 21 57 0 0 chr13 42716217 42716252 -77568060 + AT_rich Low_complexity Low_complexity 1 35 0 3 910 1103 99 21 0 chr13 42717346 42717488 -77566824 + B1_Mus1 SINE Alu 4 148 0 3 910 257 307 57 0 chr13 42718023 42718111 -77566201 + MTEa LTR MaLR 1 93 -286 3 910 294 68 0 43 chr13 42719795 42719841 -77564471 + B1_Mm SINE Alu 98 141 -6 3 910 288 0 0 0 chr13 42719842 42719874 -77564438 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 910 480 159 0 0 chr13 42720330 42720411 -77563901 + (TA)n Simple_repeat Simple_repeat 2 82 0 3 910 333 0 0 0 chr13 42720411 42720448 -77563864 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 910 480 159 0 0 chr13 42720448 42720454 -77563858 + (TA)n Simple_repeat Simple_repeat 2 7 0 3 910 3391 294 126 29 chr13 42720533 42722034 -77562278 + Lx8 LINE L1 5825 7471 -2 3 910 588 330 70 35 chr13 42722682 42723549 -77560763 - L1M5 LINE L1 -488 5676 4777 3 910 241 308 12 25 chr13 42723965 42724045 -77560267 + MIRm SINE MIR 73 151 -125 3 910 780 153 6 12 chr13 42724286 42724301 -77560011 + polypurine Low_complexity Low_complexity 1 15 0 3 910 1188 75 0 0 chr13 42724301 42724447 -77559865 + B1_Mus2 SINE Alu 2 147 0 3 910 780 153 6 12 chr13 42724447 42724596 -77559716 + GA-rich Low_complexity Low_complexity 16 163 0 3 910 200 329 62 49 chr13 42724775 42724919 -77559393 + L3 LINE CR1 4343 4488 -1 3 910 392 319 42 52 chr13 42725943 42726185 -77558127 + B4 SINE B4 2 276 -16 3 910 402 21 0 0 chr13 42727510 42727557 -77556755 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 910 236 294 14 14 chr13 42727561 42727630 -77556682 - ID SINE ID -153 71 3 3 910 303 28 0 0 chr13 42728200 42728236 -77556076 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 910 3000 182 67 14 chr13 42728249 42728474 -77555838 - Lx6 LINE L1 -4 7456 7231 3 910 2062 97 95 20 chr13 42728474 42728780 -77555532 + ORR1A4 LTR MaLR 1 329 0 3 910 3000 182 67 14 chr13 42728780 42729138 -77555174 - Lx6 LINE L1 -230 7230 6842 3 113 1013 260 112 0 chr13 42729321 42729579 -77554733 + ORR1D2 LTR MaLR 1 287 -83 3 911 402 143 0 0 chr13 42729589 42729652 -77554660 + ORR1C1 LTR MaLR 8 70 -308 3 911 413 211 63 0 chr13 42729652 42729797 -77554515 + ORR1C1 LTR MaLR 264 405 -14 3 911 703 268 26 21 chr13 42730019 42730213 -77554099 - B3 SINE B2 -1 197 3 3 911 242 299 0 15 chr13 42730959 42731027 -77553285 + L1M5 LINE L1 5463 5529 -595 3 911 479 303 15 0 chr13 42732237 42732369 -77551943 - ID_B1 SINE B4 -7 217 84 3 911 253 297 11 21 chr13 42732372 42732465 -77551847 - L1MEg LINE L1 -4960 1124 1033 3 911 435 250 21 0 chr13 42732465 42732561 -77551751 - B4A SINE B4 -192 100 3 3 911 433 354 49 0 chr13 42732941 42733085 -77551227 + B3A SINE B2 1 151 -47 4 911 270 0 0 0 chr13 42733085 42733115 -77551197 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 911 447 19 0 0 chr13 42733115 42733166 -77551146 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 911 302 379 67 42 chr13 42733368 42733729 -77550583 + HAL1b LINE L1 1191 1560 -449 4 911 603 196 7 13 chr13 42733732 42733887 -77550425 + CT-rich Low_complexity Low_complexity 3 156 0 4 911 789 230 44 33 chr13 42734573 42734753 -77549559 + B3A SINE B2 1 182 -16 4 911 3666 98 18 16 chr13 42734780 42735211 -77549101 + Lx LINE L1 6145 6578 -76 4 911 2103 110 12 51 chr13 42735211 42735546 -77548766 - RLTRETN_Mm LTR ERVK 0 322 1 4 911 3666 98 18 16 chr13 42735546 42735621 -77548691 + Lx LINE L1 6579 6652 -2 4 911 998 277 13 9 chr13 42736652 42736885 -77547427 - MTE2b LTR MaLR -145 234 1 4 911 1059 98 11 17 chr13 42737016 42737193 -77547119 + (TTCTCC)n Simple_repeat Simple_repeat 5 180 0 4 911 270 0 0 0 chr13 42737331 42737361 -77546951 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 911 540 306 8 0 chr13 42737959 42738093 -77546219 + ID_B1 SINE B4 90 224 0 4 911 1857 149 67 72 chr13 42738308 42738684 -77545628 + ORR1C1 LTR MaLR 4 377 -1 4 911 31 58 0 0 chr13 42738810 42738862 -77545450 + AT_rich Low_complexity Low_complexity 1 52 0 4 911 694 255 43 9 chr13 42739196 42739372 -77544940 - B3A SINE B2 -18 177 2 4 911 307 238 65 19 chr13 42739918 42740025 -77544287 + RMER15 LTR ERVL 422 533 -42 4 911 458 235 20 20 chr13 42740189 42740289 -77544023 - B3 SINE B2 -100 116 17 4 911 2134 175 84 8 chr13 42740981 42741372 -77542940 - MTC LTR MaLR 0 421 1 4 911 561 185 92 9 chr13 42741715 42741824 -77542488 + RSINE1 SINE B4 2 119 -46 4 911 250 298 0 0 chr13 42741873 42741930 -77542382 - B4A SINE B4 0 292 236 4 911 392 333 12 47 chr13 42741927 42742097 -77542215 + B4A SINE B4 129 292 0 4 911 4529 137 68 10 chr13 42742311 42743013 -77541299 - Lx2 LINE L1 0 6997 6255 4 911 420 284 0 9 chr13 42743559 42743669 -77540643 + PB1 SINE Alu 11 119 -8 4 911 698 282 126 9 chr13 42744311 42744644 -77539668 + L1MA7 LINE L1 5652 6023 -268 4 911 293 312 0 12 chr13 42744702 42744783 -77539529 + ID4_ SINE ID 2 81 -2 4 911 312 313 61 0 chr13 42744796 42744911 -77539401 + L1MA7 LINE L1 6167 6288 -3 4 911 250 203 27 80 chr13 42745490 42745565 -77538747 + ID4_ SINE ID 4 74 -9 4 911 316 25 50 0 chr13 42746133 42746173 -77538139 + HAL1-3A_ME LINE L1 1969 2010 -848 4 911 388 342 26 63 chr13 42747849 42748175 -77536137 + L1MC4a LINE L1 7434 7731 -151 4 911 339 44 0 0 chr13 42749315 42749360 -77534952 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 911 497 209 122 15 chr13 42749365 42749496 -77534816 - B3A SINE B2 -38 160 16 4 911 562 256 17 0 chr13 42749519 42749636 -77534676 - PB1D9 SINE Alu -1 119 1 4 911 826 199 0 7 chr13 42751550 42751692 -77532620 + B1_Mus2 SINE Alu 7 147 0 4 911 595 284 128 0 chr13 42751701 42751842 -77532470 + B3A SINE B2 1 159 -39 4 911 21 57 0 0 chr13 42751845 42751880 -77532432 + AT_rich Low_complexity Low_complexity 1 35 0 4 911 435 322 70 19 chr13 42752544 42752759 -77531553 + RLTR42-int LTR ERVK 1175 1400 -4122 4 911 329 337 0 10 chr13 42753107 42753209 -77531103 + B4A SINE B4 43 143 -149 4 911 441 0 0 0 chr13 42754314 42754363 -77529949 + (A)n Simple_repeat Simple_repeat 1 49 0 4 911 1170 253 59 15 chr13 42754371 42754644 -77529668 + B4A SINE B4 1 285 -7 4 911 202 245 0 19 chr13 42754650 42754704 -77529608 + (CATA)n Simple_repeat Simple_repeat 4 56 0 4 911 396 0 0 0 chr13 42756125 42756169 -77528143 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 911 317 347 26 20 chr13 42756485 42756638 -77527674 + MER5B DNA MER1_type 25 178 0 4 911 396 235 40 10 chr13 42756796 42756895 -77527417 - MER5A1 DNA MER1_type -48 118 17 4 911 189 320 141 0 chr13 42757206 42757284 -77527028 - MER5A1 DNA MER1_type -61 105 17 4 911 536 274 73 7 chr13 42757370 42757506 -77526806 - B3A SINE B2 -49 149 5 4 911 513 233 10 0 chr13 42757561 42757664 -77526648 + ID_B1 SINE B4 121 224 0 4 911 306 250 0 0 chr13 42758112 42758180 -77526132 + RLTR24 LTR ERV1 8 75 -454 4 911 280 267 112 132 chr13 42758307 42758557 -77525755 + RLTR24 LTR ERV1 285 529 0 4 911 213 39 0 0 chr13 42759189 42759215 -77525097 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 911 404 208 10 0 chr13 42759411 42759507 -77524805 + GA-rich Low_complexity Low_complexity 2 98 0 4 911 225 0 0 0 chr13 42761273 42761298 -77523014 + (A)n Simple_repeat Simple_repeat 1 25 0 4 911 603 232 60 0 chr13 42762250 42762401 -77521911 + RMER15 LTR ERVL 416 575 0 4 911 3498 38 5 2 chr13 42762424 42762819 -77521493 + MTA_Mm LTR MaLR 1 396 0 4 911 439 244 41 134 chr13 42762986 42763180 -77521132 + L1MB3 LINE L1 5593 5768 -403 4 911 333 155 0 0 chr13 42763180 42763238 -77521074 + (TGGA)n Simple_repeat Simple_repeat 2 59 0 4 911 376 263 17 8 chr13 42763238 42763357 -77520955 + L1MB3 LINE L1 5751 5870 -313 4 911 277 321 28 49 chr13 42763491 42763635 -77520677 + L1MB3 LINE L1 5861 6001 -179 4 911 2030 206 124 26 chr13 42763649 42764072 -77520240 + RMER15 LTR ERVL 18 483 -92 4 911 3263 159 18 2 chr13 42764072 42764587 -77519725 - RLTR28 LTR ERVL -1 523 1 4 911 2030 206 124 26 chr13 42764587 42764633 -77519679 + RMER15 LTR ERVL 484 532 -43 4 911 1026 118 0 0 chr13 42764633 42764794 -77519518 + (TC)n Simple_repeat Simple_repeat 2 162 0 4 911 2030 206 124 26 chr13 42764794 42764830 -77519482 + RMER15 LTR ERVL 533 573 -2 4 911 187 302 15 31 chr13 42765003 42765068 -77519244 + MIRc SINE MIR 18 81 -187 4 911 790 199 35 0 chr13 42765160 42765301 -77519011 - B1_Mm SINE Alu -1 146 1 4 911 230 311 179 15 chr13 42765667 42765801 -77518511 - MER5A1 DNA MER1_type -9 157 2 4 911 1495 139 9 9 chr13 42766531 42766756 -77517556 - URR1B DNA MER1_type 0 225 1 4 911 236 216 0 39 chr13 42768512 42768589 -77515723 + CT-rich Low_complexity Low_complexity 3 76 0 4 911 648 254 67 59 chr13 42771039 42771242 -77513070 + B3A SINE B2 1 200 -16 4 911 465 50 0 0 chr13 42771297 42771357 -77512955 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 911 321 259 133 18 chr13 42771794 42771959 -77512353 - Lx8 LINE L1 0 7473 7290 4 911 671 275 119 16 chr13 42772179 42772430 -77511882 - B4A SINE B4 -15 277 1 4 911 963 292 50 6 chr13 42772494 42772811 -77511501 + MER2 DNA MER2_type 9 339 -6 4 911 338 247 27 75 chr13 42773708 42773817 -77510495 + B1F SINE Alu 16 123 -26 4 911 653 238 6 75 chr13 42774021 42774180 -77510132 + B1_Mus1 SINE Alu 1 148 0 4 911 294 148 0 0 chr13 42774357 42774411 -77509901 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 911 461 329 9 83 chr13 42774447 42774675 -77509637 - B4A SINE B4 -75 217 1 4 911 189 197 28 14 chr13 42774853 42774925 -77509387 + CT-rich Low_complexity Low_complexity 2 74 0 4 911 193 300 29 20 chr13 42779371 42779473 -77504839 - L2c LINE L2 -345 3042 2940 4 911 450 0 0 0 chr13 42780295 42780345 -77503967 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 911 185 287 103 52 chr13 42782082 42782218 -77502094 + MER5B DNA MER1_type 26 168 -10 4 911 250 237 17 0 chr13 42782433 42782492 -77501820 - ID4_ SINE ID -23 60 1 4 911 397 317 209 38 chr13 42782677 42782911 -77501401 + B4 SINE B4 1 274 -18 4 911 375 41 0 0 chr13 42782930 42782979 -77501333 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 911 264 30 0 0 chr13 42782979 42783011 -77501301 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 911 183 277 43 0 chr13 42783069 42783116 -77501196 - MIRb SINE MIR -195 73 25 4 911 209 292 46 0 chr13 42784044 42784109 -77500203 + MIRc SINE MIR 69 136 -132 4 911 414 101 0 0 chr13 42784161 42784230 -77500082 + (GA)n Simple_repeat Simple_repeat 2 70 0 4 911 309 26 0 0 chr13 42784290 42784328 -77499984 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 911 198 71 0 0 chr13 42786553 42786581 -77497731 + (A)n Simple_repeat Simple_repeat 1 28 0 4 911 547 295 0 109 chr13 42787501 42787676 -77496636 + B3 SINE B2 29 184 -32 4 911 297 0 0 0 chr13 42787678 42787711 -77496601 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 911 1153 65 0 21 chr13 42788526 42788668 -77495644 + B1_Mus1 SINE Alu 1 139 -9 4 911 468 0 0 0 chr13 42788668 42788720 -77495592 + (GGAA)n Simple_repeat Simple_repeat 2 53 0 4 911 240 35 0 0 chr13 42788720 42788749 -77495563 + (GA)n Simple_repeat Simple_repeat 2 30 0 4 911 1033 119 23 0 chr13 42788749 42788925 -77495387 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 911 501 84 0 0 chr13 42789860 42789931 -77494381 + (CA)n Simple_repeat Simple_repeat 1 71 0 4 911 261 0 0 0 chr13 42790275 42790304 -77494008 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 4 911 21 36 0 0 chr13 42790433 42790461 -77493851 + AT_rich Low_complexity Low_complexity 1 28 0 4 911 486 0 0 0 chr13 42791069 42791123 -77493189 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 911 459 0 0 0 chr13 42791123 42791174 -77493138 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 911 1473 233 106 23 chr13 42791354 42791740 -77492572 - MTD LTR MaLR -1 418 1 4 911 303 279 58 22 chr13 42792228 42792367 -77491945 - MIR SINE MIR -6 256 113 4 911 1433 84 0 6 chr13 42793439 42793619 -77490693 + B2_Mm2 SINE B2 2 180 -15 4 911 236 273 40 144 chr13 42794832 42795110 -77489202 - L1MC4 LINE L1 -751 7291 7043 4 911 2079 303 32 44 chr13 42795725 42796480 -77487832 - Lx8 LINE L1 -408 7065 6320 4 911 795 276 38 36 chr13 42796606 42796971 -77487341 - L1MD LINE L1 -2804 3342 2977 4 911 331 335 55 38 chr13 42796990 42797282 -77487030 - L1M5 LINE L1 -949 5197 4901 4 911 376 316 63 13 chr13 42797345 42797582 -77486730 - L1M5 LINE L1 -1355 4791 4543 4 911 242 282 0 0 chr13 42797592 42797667 -77486645 - L1M5 LINE L1 -1983 4163 4056 4 911 691 253 20 14 chr13 42797896 42798044 -77486268 + RSINE1 SINE B4 4 152 -13 5 911 324 0 0 0 chr13 42798070 42798106 -77486206 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 5 911 300 306 135 21 chr13 42798119 42798356 -77485956 - L1M5 LINE L1 -1775 4371 4108 5 911 306 330 9 9 chr13 42798450 42798557 -77485755 + PB1D10 SINE Alu 10 116 -1 5 911 932 181 86 25 chr13 42799221 42799419 -77484893 - MTD LTR MaLR -14 405 196 5 911 297 0 0 0 chr13 42799419 42799452 -77484860 + (T)n Simple_repeat Simple_repeat 1 33 0 5 911 5961 62 1 1 chr13 42799494 42800201 -77484111 - L1Md_F2 LINE L1 0 6582 5876 5 911 956 222 25 25 chr13 42800202 42800401 -77483911 - MTD LTR MaLR -207 212 14 5 911 426 322 28 14 chr13 42801037 42801182 -77483130 + B1F2 SINE Alu 1 147 -2 5 911 2269 140 6 23 chr13 42801542 42801894 -77482418 - ORR1B2 LTR MaLR -15 352 7 5 911 416 271 52 15 chr13 42802029 42802164 -77482148 + B1F SINE Alu 1 140 -9 5 911 560 53 13 0 chr13 42802184 42802260 -77482052 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 5 911 534 290 102 53 chr13 42802334 42802578 -77481734 + MER2 DNA MER2_type 80 335 -10 5 911 655 290 112 41 chr13 42802756 42803098 -77481214 + MTD LTR MaLR 3 419 0 5 911 334 272 96 9 chr13 42804852 42804967 -77479345 - HAL1-3A_ME LINE L1 -450 2408 2284 5 911 299 282 29 0 chr13 42804967 42805070 -77479242 + CT-rich Low_complexity Low_complexity 3 108 0 5 911 295 218 23 56 chr13 42805795 42805920 -77478392 + GA-rich Low_complexity Low_complexity 1 120 0 5 911 256 249 95 85 chr13 42808663 42808852 -77475460 + RMER17D LTR ERVK 177 367 -522 5 911 329 43 21 0 chr13 42808854 42808901 -77475411 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 911 397 264 156 76 chr13 42808916 42809154 -77475158 - B4A SINE B4 -1 291 35 5 911 423 0 0 0 chr13 42810437 42810484 -77473828 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 911 213 298 42 42 chr13 42810669 42810788 -77473524 - L2a LINE L2 -4 3422 3304 5 911 260 228 107 19 chr13 42811272 42811375 -77472937 - L2a LINE L2 -412 3007 2896 5 911 255 222 74 56 chr13 42811493 42811599 -77472713 + RMER17C LTR ERVK 113 225 -185 5 911 465 19 0 0 chr13 42811599 42811653 -77472659 + (TC)n Simple_repeat Simple_repeat 2 55 0 5 911 255 222 74 56 chr13 42811653 42811708 -77472604 + RMER17C LTR ERVK 226 277 -133 5 911 299 311 106 57 chr13 42812641 42812872 -77471440 + MIR SINE MIR 3 236 -26 5 911 375 161 25 0 chr13 42812945 42813063 -77471249 + (CCA)n Simple_repeat Simple_repeat 2 122 0 5 911 192 77 0 0 chr13 42813299 42813325 -77470987 + (CCA)n Simple_repeat Simple_repeat 1 26 0 5 911 761 303 5 14 chr13 42813420 42813631 -77470681 + ID_B1 SINE B4 15 223 -1 5 911 621 277 117 74 chr13 42813731 42813988 -77470324 + B4 SINE B4 2 269 -23 5 911 820 28 0 18 chr13 42813990 42814099 -77470213 + (GGGAGA)n Simple_repeat Simple_repeat 6 112 0 5 911 214 266 142 35 chr13 42817183 42817296 -77467016 + MIRb SINE MIR 25 149 -119 5 911 228 204 0 0 chr13 42818195 42818239 -77466073 - ID4 SINE ID -38 45 2 5 911 390 297 21 21 chr13 42818254 42818395 -77465917 - B1F1 SINE Alu -8 141 1 5 911 320 348 0 26 chr13 42818972 42819087 -77465225 + MER63A DNA AcHobo 45 156 -54 5 911 269 259 0 12 chr13 42820803 42820885 -77463427 + CT-rich Low_complexity Low_complexity 2 82 0 5 911 184 380 65 11 chr13 42821873 42821966 -77462346 - L2c LINE L2 -197 3190 3093 5 911 233 200 246 0 chr13 42823183 42823248 -77461064 - ID4 SINE ID 0 83 3 5 911 252 0 0 0 chr13 42824334 42824362 -77459950 + (T)n Simple_repeat Simple_repeat 1 28 0 5 911 294 229 0 24 chr13 42824371 42824456 -77459856 + Lx5 LINE L1 6968 7050 0 5 911 414 0 0 0 chr13 42824814 42824860 -77459452 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 911 484 285 84 21 chr13 42824872 42825062 -77459250 - Lx7 LINE L1 -548 7148 6947 5 911 528 233 17 8 chr13 42825432 42825549 -77458763 - Lx8 LINE L1 -524 6949 6832 5 911 322 333 75 50 chr13 42825548 42825562 -77458750 - Lx7 LINE L1 -1515 6181 6170 5 911 354 45 0 0 chr13 42825562 42825606 -77458706 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 911 327 319 92 40 chr13 42825606 42825910 -77458402 - Lx7 LINE L1 -1527 6169 5855 5 911 1123 259 89 55 chr13 42826173 42826577 -77457735 - Lx8 LINE L1 0 7473 7056 5 911 283 286 0 82 chr13 42828240 42828362 -77455950 - Lx9 LINE L1 -149 7495 7384 5 911 366 300 113 14 chr13 42828373 42828515 -77455797 + Lx9 LINE L1 6639 6794 -850 5 911 324 0 0 0 chr13 42830076 42830112 -77454200 + (TTA)n Simple_repeat Simple_repeat 3 38 0 5 911 739 177 18 35 chr13 42830163 42830333 -77453979 + Lx7 LINE L1 7369 7535 -161 5 911 498 339 30 35 chr13 42830363 42830562 -77453750 + B4A SINE B4 14 211 -81 5 911 197 305 9 0 chr13 42830565 42830670 -77453642 + (CA)n Simple_repeat Simple_repeat 2 107 0 5 911 414 0 0 0 chr13 42831791 42831837 -77452475 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 911 291 28 0 0 chr13 42831837 42831872 -77452440 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 911 252 143 20 20 chr13 42832624 42832674 -77451638 - B3 SINE B2 -3 213 164 5 911 241 191 0 0 chr13 42832674 42832721 -77451591 - B3A SINE B2 -151 47 1 5 911 288 170 10 50 chr13 42832739 42832838 -77451474 + (TTATA)n Simple_repeat Simple_repeat 1 95 0 5 911 467 169 16 16 chr13 42834677 42834803 -77449509 + (TATG)n Simple_repeat Simple_repeat 4 129 0 5 911 866 302 13 60 chr13 42834815 42835114 -77449198 - B4A SINE B4 -6 286 2 5 911 2842 249 62 40 chr13 42835151 42836026 -77448286 + RCHARR1 DNA MER1_type 80 973 -1 5 911 275 274 12 23 chr13 42836708 42836794 -77447518 + MLT1A1 LTR MaLR 319 403 -5 5 911 738 271 132 36 chr13 42836918 42837167 -77447145 + B4A SINE B4 1 273 -19 5 911 392 55 0 18 chr13 42837209 42837265 -77447047 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 911 578 131 0 10 chr13 42838548 42838648 -77445664 + (CGGA)n Simple_repeat Simple_repeat 2 100 0 5 911 272 148 0 16 chr13 42839734 42839796 -77444516 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 911 434 233 0 120 chr13 42840616 42840733 -77443579 - B3A SINE B2 -93 105 3 5 911 410 0 20 0 chr13 42841103 42841153 -77443159 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 911 180 0 0 0 chr13 42841153 42841173 -77443139 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 911 679 306 29 31 chr13 42841812 42842138 -77442174 - MER47B DNA MER2_type -24 394 2 5 911 476 257 92 23 chr13 42842177 42842409 -77441903 + MER44A DNA MER2_type 2 254 -85 5 911 313 227 13 0 chr13 42842572 42842643 -77441669 + MER47C DNA MER2_type 20 95 -2 5 911 298 358 122 51 chr13 42843983 42844389 -77439923 + L2 LINE L2 1987 2403 -1016 5 911 399 100 0 0 chr13 42844389 42844459 -77439853 + (ATTG)n Simple_repeat Simple_repeat 2 71 0 5 911 298 358 122 51 chr13 42844459 42844909 -77439403 + L2 LINE L2 2404 2904 -515 5 911 234 0 0 0 chr13 42845079 42845105 -77439207 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 911 1210 144 6 0 chr13 42846172 42846345 -77437967 + B2_Mm1t SINE B2 2 175 -18 5 911 343 251 44 98 chr13 42846693 42846874 -77437438 - ORR1D2 LTR MaLR -167 192 11 5 911 798 11 0 0 chr13 42849107 42849198 -77435114 + (GGGAGA)n Simple_repeat Simple_repeat 5 95 0 5 911 226 342 135 66 chr13 42849286 42849603 -77434709 + L2a LINE L2 2957 3298 -128 5 911 759 42 0 0 chr13 42849603 42849698 -77434614 + (CA)n Simple_repeat Simple_repeat 2 96 0 5 911 226 342 135 66 chr13 42849698 42849803 -77434509 + L2a LINE L2 3299 3408 -18 5 911 196 222 14 14 chr13 42849810 42849883 -77434429 + GA-rich Low_complexity Low_complexity 1 73 0 5 911 423 0 0 0 chr13 42851383 42851430 -77432882 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 911 260 300 78 20 chr13 42851473 42851575 -77432737 - ORR1E LTR MaLR -251 108 1 5 911 339 277 59 10 chr13 42854204 42854306 -77430006 - Kanga1 DNA Tc2 -3 1742 1636 5 911 437 287 65 93 chr13 42855315 42855530 -77428782 - MER20 DNA MER1_type -6 213 5 5 911 805 341 40 31 chr13 42856697 42857051 -77427261 + ORR1E LTR MaLR 1 357 -2 5 911 302 329 47 30 chr13 42857866 42858035 -77426277 + MER5A DNA MER1_type 13 184 -5 5 911 297 0 0 0 chr13 42858226 42858259 -77426053 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 911 484 334 105 56 chr13 42858316 42858658 -77425654 + ORR1E LTR MaLR 1 359 0 5 911 26 30 0 0 chr13 42858693 42858726 -77425586 + AT_rich Low_complexity Low_complexity 1 33 0 5 911 271 245 149 47 chr13 42858848 42858955 -77425357 - Lx8 LINE L1 -61 7412 7295 5 911 1166 248 33 13 chr13 42858953 42859256 -77425056 + Lx8 LINE L1 6939 7247 -226 5 911 730 242 40 50 chr13 42859405 42859605 -77424707 + B3A SINE B2 1 198 0 5 912 1023 200 5 53 chr13 42860766 42860956 -77423356 + B3A SINE B2 2 182 -16 5 912 846 126 0 0 chr13 42861758 42861893 -77422419 + (GGGA)n Simple_repeat Simple_repeat 4 138 0 5 912 213 158 70 0 chr13 42861897 42861954 -77422358 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 5 912 421 322 5 72 chr13 42863080 42863274 -77421038 + B3A SINE B2 2 182 -16 5 912 259 227 0 15 chr13 42863274 42863336 -77420976 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 912 22 35 0 0 chr13 42863336 42863365 -77420947 + AT_rich Low_complexity Low_complexity 1 29 0 5 912 309 311 52 26 chr13 42863717 42863872 -77420440 - MER117 DNA MER1_type -37 160 2 5 912 530 229 49 107 chr13 42863893 42863922 -77420390 + B3A SINE B2 6 34 -164 5 912 1252 157 18 40 chr13 42863922 42864148 -77420164 + URR1B DNA MER1_type 5 225 0 5 912 530 229 49 107 chr13 42864148 42864323 -77419989 + B3A SINE B2 35 198 0 5 912 490 269 43 22 chr13 42864479 42864620 -77419692 + ID_B1 SINE B4 82 220 -4 5 912 224 222 56 0 chr13 42864855 42864909 -77419403 + ID4_ SINE ID 21 77 -6 5 912 477 0 0 0 chr13 42865305 42865358 -77418954 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 5 912 256 202 172 66 chr13 42866320 42866442 -77417870 + MER5A1 DNA MER1_type 32 166 0 5 912 358 266 185 64 chr13 42866896 42867069 -77417243 - Tigger7 DNA MER2_type 0 2491 2298 6 912 245 272 129 11 chr13 42867072 42867165 -77417147 + PB1D10 SINE Alu 6 109 -8 6 912 680 304 55 9 chr13 42867316 42867535 -77416777 - Tigger7 DNA MER2_type -2254 237 9 6 912 288 131 14 116 chr13 42870324 42870393 -77413919 + RMER4A LTR ERVK 3 64 -402 6 912 1235 39 7 7 chr13 42870393 42870547 -77413765 + L1Md_F2 LINE L1 6410 6563 -19 6 912 231 36 0 0 chr13 42870550 42870578 -77413734 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 6 912 335 290 29 20 chr13 42870578 42870680 -77413632 + Lx8 LINE L1 6536 6638 -835 6 912 2316 146 33 51 chr13 42870680 42871129 -77413183 + RMER4A LTR ERVK 26 466 0 6 912 27 29 0 0 chr13 42871276 42871310 -77413002 + AT_rich Low_complexity Low_complexity 1 34 0 6 912 418 280 28 0 chr13 42872035 42872142 -77412170 + ID_B1 SINE B4 81 190 -34 6 912 297 0 0 0 chr13 42872351 42872384 -77411928 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 912 245 128 21 0 chr13 42872384 42872431 -77411881 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 6 912 357 188 0 0 chr13 42872451 42872531 -77411781 + G-rich Low_complexity Low_complexity 1 80 0 6 912 432 0 0 0 chr13 42873418 42873466 -77410846 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 912 851 94 0 8 chr13 42873943 42874071 -77410241 + (TTCC)n Simple_repeat Simple_repeat 2 128 0 6 912 1128 97 0 0 chr13 42874086 42874230 -77410082 - B1_Mus1 SINE Alu 0 148 5 6 912 3633 163 36 34 chr13 42874323 42875327 -77408985 - Lx6 LINE L1 -1222 6238 5218 6 912 22 56 0 0 chr13 42878293 42878329 -77405983 + AT_rich Low_complexity Low_complexity 1 36 0 6 912 900 240 25 15 chr13 42878343 42878542 -77405770 - B3 SINE B2 -15 201 1 6 912 204 40 0 0 chr13 42878994 42879019 -77405293 + (T)n Simple_repeat Simple_repeat 1 25 0 6 912 1145 90 14 0 chr13 42879019 42879164 -77405148 - B1_Mus2 SINE Alu 0 147 1 6 912 612 268 65 16 chr13 42879217 42879403 -77404909 + B4A SINE B4 39 233 -59 6 912 362 268 64 86 chr13 42879416 42879510 -77404802 + Lx8 LINE L1 7246 7351 -122 6 912 1117 93 0 17 chr13 42879510 42879685 -77404627 + (GGAA)n Simple_repeat Simple_repeat 4 175 0 6 912 362 268 64 86 chr13 42879685 42879720 -77404592 + Lx8 LINE L1 7352 7382 -91 6 912 834 66 26 19 chr13 42879720 42879874 -77404438 + (TAGA)n Simple_repeat Simple_repeat 3 157 0 6 912 362 268 64 86 chr13 42879874 42879976 -77404336 + Lx8 LINE L1 7383 7472 -1 6 912 540 45 0 0 chr13 42880034 42880101 -77404211 + (CA)n Simple_repeat Simple_repeat 2 68 0 6 912 261 0 0 0 chr13 42880153 42880182 -77404130 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 6 912 308 200 11 0 chr13 42880579 42880669 -77403643 + (CA)n Simple_repeat Simple_repeat 2 92 0 6 912 569 345 51 8 chr13 42881103 42881357 -77402955 + MER2 DNA MER2_type 4 268 -77 6 912 886 181 202 0 chr13 42881787 42881975 -77402337 - URR1A DNA MER1_type 0 226 1 6 912 244 294 143 74 chr13 42882005 42882222 -77402090 - ORR1E LTR MaLR -122 237 6 6 912 194 0 39 0 chr13 42882981 42883007 -77401305 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 912 414 0 0 0 chr13 42883126 42883172 -77401140 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 912 363 96 0 0 chr13 42884656 42884708 -77399604 + (CGTG)n Simple_repeat Simple_repeat 1 52 0 6 912 824 211 46 12 chr13 42884710 42884883 -77399429 + B3 SINE B2 38 216 0 6 912 2573 59 13 0 chr13 42885682 42885985 -77398327 - L1_Mus1 LINE L1 0 6567 6261 6 912 180 0 0 0 chr13 42885985 42886005 -77398307 + (TTTC)n Simple_repeat Simple_repeat 4 23 0 6 912 2004 148 59 18 chr13 42886005 42886342 -77397970 - Lx4A LINE L1 0 7058 6708 6 912 2302 94 0 0 chr13 42886343 42886652 -77397660 + L1_Mur2 LINE L1 5339 5647 -230 6 912 455 260 0 7 chr13 42889672 42889823 -77394489 + (CA)n Simple_repeat Simple_repeat 2 151 0 6 912 565 288 42 133 chr13 42889874 42890089 -77394223 + B4A SINE B4 13 230 -62 6 912 1140 82 141 0 chr13 42890089 42890259 -77394053 + B2_Mm2 SINE B2 1 194 -1 6 912 565 288 42 133 chr13 42890259 42890351 -77393961 + B4A SINE B4 231 292 0 6 912 381 220 53 32 chr13 42890525 42890619 -77393693 + B1F SINE Alu 18 113 -36 6 912 240 125 0 48 chr13 42890629 42890671 -77393641 + B1F SINE Alu 74 113 -36 6 912 281 119 0 169 chr13 42890681 42890752 -77393560 + B1F SINE Alu 74 132 -17 6 912 292 231 15 30 chr13 42890774 42890841 -77393471 + B1F SINE Alu 74 139 -10 6 912 251 305 116 44 chr13 42891145 42891395 -77392917 + Tigger15a DNA TcMar 349 616 -99 6 912 1341 199 45 87 chr13 42891755 42891882 -77392430 + ORR1C2 LTR MaLR 1 135 -249 6 912 1206 102 0 0 chr13 42891882 42892058 -77392254 + (TCTCCC)n Simple_repeat Simple_repeat 3 178 0 6 912 1341 199 45 87 chr13 42892058 42892331 -77391981 + ORR1C2 LTR MaLR 136 384 0 6 912 417 20 0 0 chr13 42892921 42892971 -77391341 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 912 378 61 0 0 chr13 42893272 42893321 -77390991 + (CCCCG)n Simple_repeat Simple_repeat 2 50 0 6 912 263 271 43 0 chr13 42893925 42893995 -77390317 + PB1D10 SINE Alu 37 109 -8 6 912 946 74 215 0 chr13 42894377 42894526 -77389786 + B2_Mm2 SINE B2 1 181 -14 6 912 515 303 45 70 chr13 42894884 42895083 -77389229 - B4 SINE B4 -98 194 1 6 912 1308 76 0 0 chr13 42895310 42895721 -77388591 + (CA)n Simple_repeat Simple_repeat 1 411 0 6 912 388 257 0 54 chr13 42895893 42896004 -77388308 + Lx7 LINE L1 5673 5777 -1919 6 912 315 0 0 0 chr13 42896221 42896256 -77388056 + (A)n Simple_repeat Simple_repeat 1 35 0 6 912 648 318 77 21 chr13 42897017 42897342 -77386970 - MLT1A LTR MaLR -7 367 25 6 912 379 325 16 0 chr13 42897950 42898076 -77386236 - MER5A DNA MER1_type -36 153 26 6 912 387 258 138 42 chr13 42900574 42900840 -77383472 - MTEb LTR MaLR -4 375 64 6 912 472 246 126 141 chr13 42902446 42902645 -77381667 - MTEb LTR MaLR 0 379 184 6 912 913 269 93 45 chr13 42902655 42902994 -77381318 + MTEa LTR MaLR 16 364 -15 6 912 231 295 54 103 chr13 42903465 42903513 -77380799 - MER121 Unknown Unknown -85 327 279 6 912 240 35 0 0 chr13 42903513 42903542 -77380770 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 6 912 231 295 54 103 chr13 42903542 42903678 -77380634 - MER121 Unknown Unknown -134 278 152 6 912 240 301 37 126 chr13 42904012 42904202 -77380110 - YREP_Mm Unknown Unknown -1458 354 182 6 912 599 275 7 21 chr13 42904068 42904213 -77380099 + B4A SINE B4 90 232 -60 6 912 204 40 0 0 chr13 42904248 42904273 -77380039 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 912 1188 61 0 26 chr13 42905672 42905685 -77378627 - B1_Mus2 SINE Alu 0 147 138 6 912 401 50 0 16 chr13 42905685 42905746 -77378566 + (TTTTG)n Simple_repeat Simple_repeat 2 61 0 6 912 1188 61 0 26 chr13 42905746 42905883 -77378429 - B1_Mus2 SINE Alu -10 137 1 6 912 504 0 0 0 chr13 42906337 42906393 -77377919 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 912 277 320 90 63 chr13 42906835 42906983 -77377329 + L2a LINE L2 3063 3210 -165 6 912 323 297 16 48 chr13 42907607 42907731 -77376581 + MLT1A1 LTR MaLR 286 405 -3 6 912 2588 174 38 70 chr13 42908140 42908714 -77375598 + RLTR20B2 LTR ERVK 1 556 -4 6 912 631 284 61 32 chr13 42910065 42910345 -77373967 - B4A SINE B4 0 292 5 6 912 330 26 0 0 chr13 42910438 42910477 -77373835 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 912 226 125 0 0 chr13 42910489 42910521 -77373791 + B1F SINE Alu 97 128 -21 6 912 390 280 32 0 chr13 42910522 42910615 -77373697 - B4A SINE B4 -196 96 1 6 912 225 154 0 0 chr13 42911255 42911294 -77373018 + (CGA)n Simple_repeat Simple_repeat 2 40 0 6 912 837 229 3 0 chr13 42911293 42911644 -77372668 + CT-rich Low_complexity Low_complexity 1 351 0 6 912 979 228 173 15 chr13 42912021 42912350 -77371962 - ORR1C2 LTR MaLR 0 384 4 6 912 502 251 11 27 chr13 42912579 42912715 -77371597 + MLT1A1 LTR MaLR 277 450 -17 6 912 1170 251 92 21 chr13 42913015 42913353 -77370959 - ORR1D2 LTR MaLR -8 362 1 6 912 8254 47 1 1 chr13 42914034 42915136 -77369176 - L1Md_F2 LINE L1 0 6582 5482 6 912 1003 64 0 0 chr13 42915136 42915261 -77369051 + B1_Mm SINE Alu 23 147 0 6 912 970 134 0 27 chr13 42915282 42915466 -77368846 + GA-rich Low_complexity Low_complexity 2 180 0 6 912 326 292 26 136 chr13 42915922 42916195 -77368117 - L1MA6 LINE L1 -60 6240 5998 6 912 600 275 121 5 chr13 42916353 42916543 -77367769 - B4A SINE B4 -22 270 59 6 912 420 20 0 0 chr13 42916546 42916595 -77367717 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 912 462 227 10 29 chr13 42916762 42916888 -77367424 + Lx7 LINE L1 5648 5772 -396 6 912 290 352 37 0 chr13 42917057 42917165 -77367147 - Tigger7 DNA MER2_type -2373 118 7 6 912 325 271 0 12 chr13 42917398 42917484 -77366828 + PB1D10 SINE Alu 11 95 -22 6 912 310 313 31 74 chr13 42918498 42918519 -77365793 - B4A SINE B4 -47 245 91 6 912 460 261 35 21 chr13 42918519 42918660 -77365652 - B1F SINE Alu -1 148 6 6 912 545 244 8 16 chr13 42918659 42918780 -77365532 - MTEa LTR MaLR -251 128 9 6 912 263 197 47 47 chr13 42919869 42919933 -77364379 - ORR1C1 LTR MaLR -153 225 162 6 912 2188 105 21 12 chr13 42919939 42920267 -77364045 + ORR1B2 LTR MaLR 29 359 -8 6 912 247 196 0 0 chr13 42920788 42920839 -77363473 + (TCTA)n Simple_repeat Simple_repeat 1 51 0 6 912 2255 104 3 58 chr13 42922637 42922985 -77361327 - ORR1A4 LTR MaLR 0 329 1 6 912 426 20 0 0 chr13 42923080 42923131 -77361181 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 912 345 257 0 107 chr13 42923287 42923409 -77360903 - PB1D7 SINE Alu -2 118 10 6 912 338 111 19 0 chr13 42923789 42923843 -77360469 - HAL1-3A_ME LINE L1 -828 2030 1976 6 912 462 263 0 0 chr13 42923847 42924018 -77360294 + (TG)n Simple_repeat Simple_repeat 1 171 0 7 912 325 281 0 17 chr13 42924044 42924225 -77360087 + (TATG)n Simple_repeat Simple_repeat 1 178 0 7 912 561 244 76 48 chr13 42925288 42925487 -77358825 - B3 SINE B2 0 193 6 7 912 405 0 0 0 chr13 42925497 42925542 -77358770 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 912 180 0 0 0 chr13 42925684 42925704 -77358608 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 912 866 155 0 0 chr13 42926464 42926593 -77357719 - B1_Mur3 SINE Alu -5 144 16 7 912 276 30 0 0 chr13 42926594 42926627 -77357685 + (CCA)n Simple_repeat Simple_repeat 2 34 0 7 912 568 299 45 0 chr13 42927075 42927229 -77357083 + RSINE1 SINE B4 1 161 -4 7 912 198 0 0 0 chr13 42927247 42927269 -77357043 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 912 693 199 5 95 chr13 42927889 42927950 -77356362 + ID_B1 SINE B4 43 224 0 7 912 1071 65 0 0 chr13 42927950 42928089 -77356223 + B1_Mus2 SINE Alu 9 147 0 7 912 825 57 210 8 chr13 42928186 42928310 -77356002 - B1_Mur4 SINE Alu 0 150 2 7 912 864 251 9 5 chr13 42928552 42928764 -77355548 + B3 SINE B2 4 216 0 7 912 343 316 29 111 chr13 42928764 42928780 -77355532 + B4 SINE B4 72 150 -142 7 912 736 246 7 0 chr13 42928780 42928922 -77355390 + B1_Mur3 SINE Alu 1 143 -6 7 912 343 316 29 111 chr13 42928922 42928935 -77355377 + B4 SINE B4 151 228 -64 7 912 378 0 0 0 chr13 42928949 42928991 -77355321 + (GA)n Simple_repeat Simple_repeat 1 42 0 7 912 3235 60 8 0 chr13 42929746 42930143 -77354169 - MTB LTR MaLR 0 400 1 7 912 290 267 56 88 chr13 42930763 42930923 -77353389 - ORR1E LTR MaLR -178 181 27 7 912 268 229 11 78 chr13 42933149 42933239 -77351073 + B4A SINE B4 123 206 -86 7 912 518 337 182 23 chr13 42933335 42933851 -77350461 - LTR41B LTR ERVL -134 624 27 7 912 232 318 0 29 chr13 42934279 42934347 -77349965 + ID4_ SINE ID 2 67 -16 7 912 880 269 56 32 chr13 42934398 42934682 -77349630 + B4 SINE B4 2 292 0 7 912 210 215 34 102 chr13 42934964 42935052 -77349260 + L2a LINE L2 3339 3420 -6 7 912 423 56 0 0 chr13 42935772 42935826 -77348486 + (TA)n Simple_repeat Simple_repeat 1 54 0 7 912 330 26 0 0 chr13 42935828 42935867 -77348445 + (TC)n Simple_repeat Simple_repeat 1 39 0 7 912 232 279 16 0 chr13 42936783 42936844 -77347468 + ORR1E LTR MaLR 1 62 -297 7 912 525 264 78 0 chr13 42937884 42938013 -77346299 + ID_B1 SINE B4 86 224 0 7 912 180 403 36 22 chr13 42938682 42938819 -77345493 + MIR3 SINE MIR 30 168 -40 7 912 307 237 12 84 chr13 42939132 42939215 -77345097 + BC1_Mm scRNA scRNA 5 81 -71 7 912 402 190 0 0 chr13 42939256 42939377 -77344935 + (TG)n Simple_repeat Simple_repeat 2 122 0 7 912 216 299 142 68 chr13 42939487 42939663 -77344649 + MIRb SINE MIR 60 248 -20 7 912 184 291 101 93 chr13 42939890 42940019 -77344293 + MIRb SINE MIR 94 223 -45 7 912 207 395 40 0 chr13 42940712 42940788 -77343524 + MER91A DNA Tip100 4 82 -114 7 912 274 337 141 45 chr13 42941028 42941205 -77343107 - MIRb SINE MIR -49 219 26 7 912 892 211 75 14 chr13 42941462 42941674 -77342638 + URR1B DNA MER1_type 1 225 0 7 912 306 0 0 0 chr13 42941939 42941973 -77342339 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 912 441 0 0 0 chr13 42942409 42942458 -77341854 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 912 187 312 0 0 chr13 42942795 42942843 -77341469 + MER5B DNA MER1_type 126 173 -5 7 912 522 0 0 0 chr13 42943769 42943827 -77340485 + (TG)n Simple_repeat Simple_repeat 1 58 0 7 912 614 296 64 43 chr13 42944215 42944448 -77339864 + MER2 DNA MER2_type 102 339 -6 7 912 385 247 12 0 chr13 42944567 42944652 -77339660 + ID SINE ID 1 86 -138 7 912 248 324 7 48 chr13 42944652 42944713 -77339599 + BC1_Mm scRNA scRNA 1 140 -12 7 912 225 231 74 37 chr13 42944775 42944856 -77339456 - PB1D10 SINE Alu -12 105 22 7 912 359 43 72 0 chr13 42944872 42944941 -77339371 + (CAAA)n Simple_repeat Simple_repeat 2 75 0 7 912 307 301 36 50 chr13 42945752 42945892 -77338420 - L1ME1 LINE L1 -102 6077 5940 7 912 224 59 29 0 chr13 42945910 42945944 -77338368 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 7 912 261 288 0 0 chr13 42945949 42946008 -77338304 - ID2 SINE ID -3 80 22 7 912 340 218 115 108 chr13 42946017 42946156 -77338156 - B1F SINE Alu -5 144 5 7 912 195 69 0 0 chr13 42946206 42946235 -77338077 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 912 317 292 40 6 chr13 42946300 42946448 -77337864 - L1ME1 LINE L1 -2173 5822 5660 7 912 1302 151 0 14 chr13 42947116 42947338 -77336974 - URR1B DNA MER1_type 0 225 7 7 912 22 35 0 0 chr13 42948382 42948411 -77335901 + AT_rich Low_complexity Low_complexity 1 29 0 7 912 1916 100 70 55 chr13 42949114 42949312 -77335000 - RMER17C LTR ERVK 0 410 214 7 912 378 0 0 0 chr13 42949312 42949354 -77334958 + (GA)n Simple_repeat Simple_repeat 1 42 0 7 912 1916 100 70 55 chr13 42949354 42949558 -77334754 - RMER17C LTR ERVK -197 213 2 7 912 24 0 0 0 chr13 42950128 42950152 -77334160 + AT_rich Low_complexity Low_complexity 1 24 0 7 912 318 206 43 14 chr13 42950477 42950546 -77333766 + URR1B DNA MER1_type 3 73 -152 7 912 653 101 0 0 chr13 42950541 42950640 -77333672 + B1_Mm SINE Alu 49 147 0 7 912 387 227 27 18 chr13 42950667 42950779 -77333533 + URR1B DNA MER1_type 68 180 -45 7 912 224 186 114 23 chr13 42950924 42951012 -77333300 + L2c LINE L2 3072 3167 -220 7 912 459 48 0 0 chr13 42951013 42951075 -77333237 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 912 230 284 30 50 chr13 42951346 42951446 -77332866 + MER103 DNA DNA 19 116 -50 7 912 234 289 25 34 chr13 42952076 42952194 -77332118 + B3A SINE B2 67 183 -15 7 912 477 281 11 0 chr13 42952194 42952482 -77331830 + (CA)n Simple_repeat Simple_repeat 1 291 0 7 912 219 23 93 0 chr13 42953012 42953055 -77331257 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 7 912 822 83 0 0 chr13 42953122 42953242 -77331070 + (TC)n Simple_repeat Simple_repeat 2 121 0 7 912 1611 26 11 0 chr13 42953722 42953913 -77330399 - B2_Mm1a SINE B2 0 193 1 7 912 1103 69 0 14 chr13 42953957 42954104 -77330208 + B1_Mm SINE Alu 3 147 0 7 912 252 309 0 14 chr13 42954784 42954853 -77329459 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 7 912 497 273 71 26 chr13 42954895 42955121 -77329191 - Lx8 LINE L1 -3 7470 7235 7 912 578 159 8 0 chr13 42955165 42955291 -77329021 + CT-rich Low_complexity Low_complexity 2 128 0 7 912 189 0 0 0 chr13 42955291 42955312 -77329000 + (CA)n Simple_repeat Simple_repeat 1 21 0 7 912 710 246 197 18 chr13 42955313 42955541 -77328771 + Lx8 LINE L1 6967 7235 -238 7 912 289 306 111 40 chr13 42955621 42955747 -77328565 - MLT1G3 LTR MaLR -460 135 1 7 912 227 301 10 41 chr13 42956601 42956698 -77327614 + GA-rich Low_complexity Low_complexity 4 97 0 7 912 252 279 149 11 chr13 42957573 42957684 -77326628 - L1MC1 LINE L1 0 6333 6210 7 912 703 146 191 18 chr13 42957890 42958058 -77326254 + URR1B DNA MER1_type 1 197 -28 7 912 328 296 41 0 chr13 42958678 42958776 -77325536 - PB1D10 SINE Alu -15 102 1 7 912 439 267 176 0 chr13 42959660 42959791 -77324521 - RSINE1 SINE B4 -8 157 4 7 912 512 247 169 57 chr13 42959888 42960167 -77324145 + MER33 DNA MER1_type 5 314 -10 7 912 186 133 0 0 chr13 42961556 42961586 -77322726 + (A)n Simple_repeat Simple_repeat 1 30 0 7 912 255 127 32 0 chr13 42963592 42963655 -77320657 - Lx4A LINE L1 -3 7055 6991 7 912 25 0 0 0 chr13 42963655 42963680 -77320632 + AT_rich Low_complexity Low_complexity 1 25 0 7 912 3497 80 6 11 chr13 42963877 42964345 -77319967 + L1_Mus3 LINE L1 6151 6616 -22 7 912 300 53 0 0 chr13 42964345 42964383 -77319929 + (TAA)n Simple_repeat Simple_repeat 2 39 0 7 912 200 378 29 29 chr13 42965323 42965462 -77318850 + MIR SINE MIR 15 153 -109 7 912 798 283 28 28 chr13 42966812 42967103 -77317209 + B4A SINE B4 2 292 0 7 912 182 59 0 81 chr13 42967151 42967188 -77317124 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 912 258 32 0 0 chr13 42967191 42967222 -77317090 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 912 464 260 44 34 chr13 42967440 42967617 -77316695 - MLT1A0 LTR MaLR -4 386 190 7 912 215 93 0 23 chr13 42967617 42967661 -77316651 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 7 912 402 285 37 99 chr13 42968948 42968978 -77315334 + B4A SINE B4 67 170 -122 7 912 875 148 7 0 chr13 42968978 42969120 -77315192 + B1_Mus1 SINE Alu 6 148 0 7 912 402 285 37 99 chr13 42969120 42969139 -77315173 + B4A SINE B4 171 245 -47 7 912 270 0 0 0 chr13 42969139 42969169 -77315143 + (GGAA)n Simple_repeat Simple_repeat 2 31 0 7 912 976 244 9 30 chr13 42969201 42969433 -77314879 + B4 SINE B4 25 251 -41 7 912 225 333 12 0 chr13 42969433 42969517 -77314795 + (CA)n Simple_repeat Simple_repeat 2 86 0 7 912 189 309 14 14 chr13 42969910 42969979 -77314333 - MIRm SINE MIR -3 273 205 7 912 382 225 223 8 chr13 42970854 42970984 -77313328 + B3 SINE B2 1 158 -58 7 912 594 344 20 20 chr13 42971021 42971217 -77313095 + B4 SINE B4 82 277 -15 7 912 213 121 0 0 chr13 42972237 42972270 -77312042 + (T)n Simple_repeat Simple_repeat 1 33 0 7 912 1068 36 0 0 chr13 42972272 42972411 -77311901 - B1_Mm SINE Alu 0 147 9 7 912 622 206 0 59 chr13 42972411 42972440 -77311872 - ID_B1 SINE B4 0 222 65 7 912 451 219 101 14 chr13 42972529 42972677 -77311635 + MER121 Unknown Unknown 148 308 -104 7 912 721 212 19 6 chr13 42972882 42973039 -77311273 + ID_B1 SINE B4 3 161 -63 8 912 229 270 124 0 chr13 42972968 42973057 -77311255 + B1_Mur4 SINE Alu 10 109 -41 8 912 330 283 156 6 chr13 42973200 42973360 -77310952 - L1MB2 LINE L1 -8 6163 5980 8 912 366 387 82 61 chr13 42974060 42974632 -77309680 - L4 LINE RTE -699 1330 747 8 912 277 300 115 26 chr13 42974681 42974794 -77309518 + RSINE1 SINE B4 3 125 -40 8 912 200 86 0 28 chr13 42974797 42974833 -77309479 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 8 912 678 295 29 33 chr13 42974863 42975105 -77309207 - B4A SINE B4 -45 247 7 8 912 437 280 85 37 chr13 42975280 42975469 -77308843 - MER2 DNA MER2_type -23 322 125 8 912 1101 96 0 0 chr13 42975949 42976095 -77308217 + B1_Mus2 SINE Alu 2 147 0 8 912 619 273 0 0 chr13 42976250 42976371 -77307941 + B3A SINE B2 1 121 -77 8 912 405 152 31 16 chr13 42976419 42976546 -77307766 + (CAGAGA)n Simple_repeat Simple_repeat 2 130 0 8 912 565 300 0 0 chr13 42977025 42977165 -77307147 - RSINE1 SINE B4 -23 142 3 8 912 294 195 51 25 chr13 42977473 42977552 -77306760 - ID4_ SINE ID 0 83 3 8 912 557 221 57 98 chr13 42978334 42978621 -77305691 + L1MB8 LINE L1 5897 6173 -5 8 912 951 229 48 10 chr13 42978720 42978927 -77305385 + B3 SINE B2 1 215 -1 8 912 659 326 85 23 chr13 42979471 42979860 -77304452 - MLT1D LTR MaLR 0 505 93 8 912 271 320 0 62 chr13 42980651 42980781 -77303531 + ID_B1 SINE B4 103 224 0 8 912 275 281 0 0 chr13 42980821 42980885 -77303427 + ID4_ SINE ID 17 80 -3 8 912 2143 91 26 78 chr13 42983441 42983786 -77300526 - ORR1A2 LTR MaLR 0 327 1 8 912 851 251 14 59 chr13 42984009 42984024 -77300288 - B3 SINE B2 -6 210 198 8 912 207 0 0 0 chr13 42984024 42984047 -77300265 + (TG)n Simple_repeat Simple_repeat 1 23 0 8 912 851 251 14 59 chr13 42984047 42984251 -77300061 - B3 SINE B2 -19 197 1 8 912 1196 75 0 0 chr13 42986975 42987122 -77297190 - B1_Mus2 SINE Alu 0 147 1 8 912 187 359 61 30 chr13 42990407 42990571 -77293741 - L2b LINE L2 -3 3372 3204 8 912 225 94 0 0 chr13 42991418 42991450 -77292862 + (A)n Simple_repeat Simple_repeat 1 32 0 8 913 228 228 0 0 chr13 42991868 42991925 -77292387 + CT-rich Low_complexity Low_complexity 4 60 0 8 913 250 329 0 26 chr13 42992011 42992089 -77292223 - ID4 SINE ID -7 76 1 8 913 902 216 9 70 chr13 42993264 42993493 -77290819 + B3 SINE B2 2 216 0 8 913 805 219 56 76 chr13 42995271 42995486 -77288826 + ID_B1 SINE B4 14 220 -4 8 913 248 148 143 36 chr13 42996937 42996993 -77287319 + ID4 SINE ID 3 64 -19 8 913 2283 133 162 15 chr13 42999371 42999760 -77284552 - RLTR41 LTR ERV1 0 446 1 8 913 21 0 0 0 chr13 43000421 43000442 -77283870 + AT_rich Low_complexity Low_complexity 1 21 0 1 913 1369 59 10 56 chr13 43002038 43002235 -77282077 - B2_Mm2 SINE B2 -6 189 2 2 913 362 65 339 0 chr13 43002246 43002308 -77282004 - tRNA-Leu-TTG tRNA tRNA -3 83 1 3 913 340 301 106 30 chr13 43002344 43002543 -77281769 - ORR1E LTR MaLR -127 232 19 4 913 386 240 0 40 chr13 43002830 43002930 -77281382 + PB1D10 SINE Alu 3 98 -19 5 913 216 220 0 17 chr13 43003637 43003697 -77280615 + PB1D10 SINE Alu 18 76 -41 6 913 564 284 21 0 chr13 43004559 43004700 -77279612 + MER44C DNA MER2_type 10 153 -580 7 913 635 185 0 42 chr13 43004743 43005034 -77279278 + (TATG)n Simple_repeat Simple_repeat 1 278 0 8 913 561 323 48 26 chr13 43005043 43005316 -77278996 - B4A SINE B4 -11 281 3 9 913 999 285 11 4 chr13 43005317 43005592 -77278720 + MER44C DNA MER2_type 182 458 -275 7 913 238 244 12 12 chr13 43005799 43005882 -77278430 + (CATA)n Simple_repeat Simple_repeat 4 86 0 1 913 767 169 17 6 chr13 43005868 43006046 -77278266 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 913 239 283 39 24 chr13 43006215 43006333 -77277979 - MLT1D LTR MaLR 0 627 525 1 913 710 238 72 11 chr13 43006504 43006712 -77277600 - B3A SINE B2 -1 215 1 1 913 281 302 58 0 chr13 43006712 43006796 -77277516 - MLT1D LTR MaLR -311 194 106 1 913 314 363 61 64 chr13 43007097 43007456 -77276856 + ORR1E LTR MaLR 2 359 0 1 913 288 294 190 7 chr13 43008081 43008218 -77276094 - MER5A1 DNA MER1_type -4 162 1 1 913 303 357 21 0 chr13 43008960 43009100 -77275212 + MER3 DNA MER1_type 65 207 -2 1 913 6138 12 0 0 chr13 43009493 43010170 -77274142 + L1Md_A LINE L1 5906 6582 0 1 913 189 0 0 0 chr13 43011040 43011061 -77273251 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 913 183 80 0 0 chr13 43011875 43011900 -77272412 + (CCCCG)n Simple_repeat Simple_repeat 2 26 0 1 913 237 83 0 0 chr13 43012506 43012542 -77271770 + (CCCCCA)n Simple_repeat Simple_repeat 1 36 0 2 913 207 100 0 0 chr13 43012706 43012736 -77271576 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 913 925 126 11 0 chr13 43014010 43014185 -77270127 + (TG)n Simple_repeat Simple_repeat 1 177 0 2 913 389 200 12 0 chr13 43014416 43014496 -77269816 - ID4 SINE ID 0 83 3 2 913 297 109 0 0 chr13 43014817 43014863 -77269449 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 913 380 340 53 13 chr13 43014872 43015024 -77269288 - RSINE1 SINE B4 -4 161 4 2 913 1100 171 4 61 chr13 43015388 43015618 -77268694 - URR1B DNA MER1_type -8 217 1 2 913 236 312 39 0 chr13 43016085 43016162 -77268150 + ID4 SINE ID 4 83 0 2 913 500 239 0 58 chr13 43016485 43016605 -77267707 - PB1D7 SINE Alu -2 118 6 2 913 350 220 179 90 chr13 43016605 43016630 -77267682 - ID_B1 SINE B4 -1 223 66 2 913 355 254 53 26 chr13 43016922 43017035 -77267277 + MIRb SINE MIR 153 268 0 3 913 333 239 0 0 chr13 43017348 43017419 -77266893 + ID4 SINE ID 2 72 -11 3 913 279 0 0 0 chr13 43018364 43018395 -77265917 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 913 248 268 81 20 chr13 43018749 43018848 -77265464 - PB1D10 SINE Alu -12 105 1 3 913 270 226 0 88 chr13 43019223 43019291 -77265021 + ID4_ SINE ID 21 82 -1 3 913 996 287 105 63 chr13 43020312 43020713 -77263599 - L1MB8 LINE L1 0 6178 5779 3 913 393 58 0 0 chr13 43020713 43020765 -77263547 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 3 913 996 287 105 63 chr13 43020765 43021048 -77263264 - L1MB8 LINE L1 -400 5778 5467 3 913 333 0 0 0 chr13 43021193 43021230 -77263082 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 913 243 214 0 0 chr13 43022118 43022160 -77262152 - PB1 SINE Alu -73 54 13 3 913 378 0 0 0 chr13 43022185 43022227 -77262085 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 913 243 261 58 0 chr13 43022947 43023016 -77261296 + ID4_ SINE ID 3 75 -8 4 913 22 35 0 0 chr13 43024598 43024627 -77259685 + AT_rich Low_complexity Low_complexity 1 29 0 4 913 243 0 0 0 chr13 43026246 43026273 -77258039 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 913 1504 209 77 11 chr13 43027413 43027776 -77256536 + MTD LTR MaLR 19 405 -14 4 913 308 259 0 45 chr13 43027789 43027878 -77256434 + PB1D10 SINE Alu 12 96 -21 4 913 489 257 44 7 chr13 43028614 43028751 -77255561 - RSINE1 SINE B4 -13 152 11 4 913 444 286 132 26 chr13 43029349 43029539 -77254773 - MER58A DNA MER1_type -11 213 4 4 913 257 335 90 5 chr13 43029573 43029762 -77254550 + MIR SINE MIR 58 262 0 4 913 265 361 23 17 chr13 43030535 43030707 -77253605 - MER20 DNA MER1_type -46 173 1 4 913 351 0 0 0 chr13 43030865 43030904 -77253408 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 913 207 0 0 0 chr13 43031094 43031117 -77253195 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 5 913 605 267 24 82 chr13 43031158 43031366 -77252946 - B3A SINE B2 -2 196 1 5 913 442 241 0 69 chr13 43032514 43032630 -77251682 + PB1D10 SINE Alu 1 108 -9 5 913 210 208 0 40 chr13 43034166 43034216 -77250096 + (TATG)n Simple_repeat Simple_repeat 1 48 0 5 913 244 307 104 9 chr13 43035440 43035555 -77248757 - MIR SINE MIR -105 157 32 5 913 242 301 12 12 chr13 43035530 43035614 -77248698 - L2 LINE L2 -1057 2362 2279 5 913 405 0 0 0 chr13 43035695 43035740 -77248572 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 913 582 318 19 0 chr13 43037781 43037992 -77246320 - MER2 DNA MER2_type -41 304 90 5 913 737 237 134 21 chr13 43038994 43039188 -77245124 - B3 SINE B2 0 216 1 5 913 5016 119 27 30 chr13 43040004 43040815 -77243497 - RMER17D2 LTR ERVK 0 809 1 5 913 1318 28 23 23 chr13 43040826 43041092 -77243220 + (GGGAGA)n Simple_repeat Simple_repeat 1 266 0 6 913 535 274 24 0 chr13 43041116 43041240 -77243072 - RSINE1 SINE B4 -36 129 3 6 913 274 268 0 24 chr13 43042000 43042084 -77242228 - ORR1E LTR MaLR -20 359 278 6 913 606 63 0 0 chr13 43042188 43042267 -77242045 + (GA)n Simple_repeat Simple_repeat 1 79 0 6 913 372 328 44 40 chr13 43042596 43042844 -77241468 - MLT1K LTR MaLR -14 581 333 6 913 535 314 47 0 chr13 43042875 43043047 -77241265 + MER58A DNA MER1_type 45 224 0 6 913 710 334 37 50 chr13 43044636 43045017 -77239295 - Lx8 LINE L1 -1 7472 7097 6 913 336 312 79 28 chr13 43045139 43045317 -77238995 - ORR1E LTR MaLR -162 197 11 6 913 291 161 0 0 chr13 43045339 43045395 -77238917 + (CAT)n Simple_repeat Simple_repeat 3 58 0 6 913 904 252 9 27 chr13 43045750 43045974 -77238338 + Lx8 LINE L1 6946 7165 -308 6 913 210 71 0 0 chr13 43046545 43046573 -77237739 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 6 913 1939 154 43 20 chr13 43046973 43047365 -77236947 - MTD LTR MaLR -18 401 1 7 913 243 310 14 0 chr13 43047520 43047591 -77236721 - ID4 SINE ID -11 72 1 7 913 765 110 0 0 chr13 43049460 43049578 -77234734 + (TC)n Simple_repeat Simple_repeat 1 118 0 7 913 336 286 114 28 chr13 43049814 43049990 -77234322 + Tigger5 DNA MER2_type 1 191 -2215 7 913 301 291 66 58 chr13 43050870 43051153 -77233159 - ORR1D1 LTR MaLR 0 374 77 7 913 447 279 0 0 chr13 43051645 43051749 -77232563 + PB1 SINE Alu 13 116 -11 7 913 386 260 40 24 chr13 43052711 43052837 -77231475 + MIR SINE MIR 33 160 -102 7 913 388 309 108 70 chr13 43052988 43053304 -77231008 - MLT1A LTR MaLR -12 362 35 7 913 501 17 0 0 chr13 43053844 43053902 -77230410 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 913 1062 291 57 6 chr13 43053911 43054243 -77230069 + Lx8 LINE L1 6820 7168 -305 7 913 255 125 0 0 chr13 43054251 43054291 -77230021 + (A)n Simple_repeat Simple_repeat 1 40 0 8 913 908 224 89 22 chr13 43054376 43054645 -77229667 + Lx8 LINE L1 7185 7471 -2 7 913 614 290 53 72 chr13 43055077 43055397 -77228915 - MER31A LTR ERV1 0 485 172 8 913 2093 105 12 18 chr13 43055434 43055724 -77228588 - ORR1A2 LTR MaLR 0 327 39 8 913 2747 43 0 75 chr13 43055724 43056098 -77228214 - ORR1A1 LTR MaLR 0 346 1 8 913 2093 105 12 18 chr13 43056098 43056136 -77228176 - ORR1A2 LTR MaLR -289 38 1 8 913 235 80 19 39 chr13 43057622 43057674 -77226638 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 8 913 519 40 13 0 chr13 43057678 43057753 -77226559 - B1_Mus2 SINE Alu 0 147 72 8 913 879 271 46 39 chr13 43058728 43058985 -77225327 + B4 SINE B4 3 269 -23 8 913 330 67 0 0 chr13 43058985 43059030 -77225282 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 913 879 271 46 39 chr13 43059030 43059056 -77225256 + B4 SINE B4 270 288 -4 8 913 293 296 63 44 chr13 43060755 43060914 -77223398 - MLT1H2 LTR MaLR -7 482 321 8 913 3535 23 2 0 chr13 43060958 43061353 -77222959 + MTA_Mm LTR MaLR 1 396 0 8 913 593 304 0 0 chr13 43061452 43061590 -77222722 + B3A SINE B2 23 160 -38 9 913 423 0 0 0 chr13 43061590 43061637 -77222675 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 913 1825 98 81 0 chr13 43061980 43062277 -77222035 + ORR1A4 LTR MaLR 1 321 -8 9 913 258 260 0 27 chr13 43062301 43062376 -77221936 - ID4_ SINE ID -9 74 2 9 913 440 264 9 9 chr13 43062711 43062822 -77221490 + PB1D10 SINE Alu 2 112 -5 9 913 27 29 0 0 chr13 43063043 43063077 -77221235 + AT_rich Low_complexity Low_complexity 1 34 0 9 913 555 221 0 0 chr13 43063378 43063505 -77220807 + (CATATA)n Simple_repeat Simple_repeat 3 129 0 9 913 571 292 112 0 chr13 43063516 43063694 -77220618 - B3 SINE B2 -18 198 1 9 913 992 219 32 28 chr13 43065005 43065129 -77219183 - ID_B1 SINE B4 -4 220 91 9 913 351 0 0 0 chr13 43065129 43065168 -77219144 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 913 992 219 32 28 chr13 43065168 43065259 -77219053 - ID_B1 SINE B4 -134 90 4 9 913 2405 77 0 102 chr13 43065790 43066048 -77218264 - ORR1A2 LTR MaLR 0 327 92 1 913 1221 48 0 0 chr13 43066048 43066193 -77218119 - B1_Mus2 SINE Alu 0 147 3 1 913 2405 77 0 102 chr13 43066193 43066298 -77218014 - ORR1A2 LTR MaLR -236 91 1 1 913 264 315 52 45 chr13 43066835 43066959 -77217353 - MIR SINE MIR -105 157 40 1 913 749 75 0 0 chr13 43068321 43068427 -77215885 - B1_Mus2 SINE Alu 0 147 42 1 913 244 0 0 158 chr13 43068430 43068550 -77215762 + (CTCTG)n Simple_repeat Simple_repeat 5 105 0 1 913 253 70 0 104 chr13 43068551 43068599 -77215713 - PB1D9 SINE Alu -61 59 17 1 913 612 231 88 0 chr13 43068738 43068885 -77215427 + RSINE1 SINE B4 6 165 0 1 913 276 102 0 0 chr13 43068890 43068939 -77215373 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 913 383 178 100 0 chr13 43069096 43069186 -77215126 - B3A SINE B2 -99 99 1 1 913 252 0 0 0 chr13 43069390 43069418 -77214894 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 913 396 0 0 0 chr13 43069418 43069461 -77214851 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 913 788 283 204 0 chr13 43069957 43070261 -77214051 - MTEb LTR MaLR -8 371 6 1 913 291 265 52 29 chr13 43070980 43071116 -77213196 + L1MC LINE L1 5635 5773 -2109 1 913 251 281 67 42 chr13 43071603 43071722 -77212590 - MIR SINE MIR -74 194 66 1 913 300 27 0 0 chr13 43072513 43072550 -77211762 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 913 585 0 0 0 chr13 43072739 43072804 -77211508 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 913 509 235 61 0 chr13 43073210 43073342 -77210970 + B1_Mur2 SINE Alu 1 140 -9 1 913 309 82 0 0 chr13 43073371 43073420 -77210892 + (GGA)n Simple_repeat Simple_repeat 3 51 0 1 913 261 119 0 0 chr13 43073420 43073462 -77210850 + (TGG)n Simple_repeat Simple_repeat 1 42 0 1 913 262 287 245 38 chr13 43073468 43073684 -77210628 + B4 SINE B4 18 278 -14 1 913 486 317 101 25 chr13 43073726 43074053 -77210259 - MLT1C LTR MaLR -115 352 1 1 913 848 242 29 14 chr13 43074529 43074739 -77209573 - B3 SINE B2 -1 215 3 1 913 454 277 8 16 chr13 43075443 43075564 -77208748 - PB1D7 SINE Alu 0 120 1 1 913 496 216 25 75 chr13 43076334 43076454 -77207858 + PB1D9 SINE Alu 1 114 -6 1 913 673 299 53 24 chr13 43076528 43076737 -77207575 + ID_B1 SINE B4 2 216 -8 1 913 249 33 0 0 chr13 43076945 43076975 -77207337 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 913 917 240 56 49 chr13 43077456 43077741 -77206571 + B4A SINE B4 6 292 0 1 913 580 273 41 0 chr13 43078603 43078775 -77205537 + B4A SINE B4 6 184 -108 1 913 243 0 0 0 chr13 43078776 43078803 -77205509 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 913 396 0 0 0 chr13 43078803 43078846 -77205466 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 913 266 243 0 54 chr13 43079676 43079750 -77204562 + (TCTCTG)n Simple_repeat Simple_repeat 1 70 0 1 913 2597 122 44 5 chr13 43079895 43080300 -77204012 + MTC LTR MaLR 1 421 0 1 913 256 279 69 11 chr13 43080608 43080695 -77203617 - MER115 DNA Tip100 -484 209 118 1 913 386 279 7 65 chr13 43082040 43082178 -77202134 + ID_B1 SINE B4 82 211 -13 1 913 1033 268 13 56 chr13 43082178 43082272 -77202040 + B4A SINE B4 2 84 -208 1 913 432 0 0 0 chr13 43082272 43082320 -77201992 + (TAA)n Simple_repeat Simple_repeat 1 48 0 1 913 1033 268 13 56 chr13 43082320 43082529 -77201783 + B4A SINE B4 85 292 0 1 913 279 0 0 0 chr13 43085349 43085380 -77198932 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 913 392 236 47 39 chr13 43085448 43085576 -77198736 + Charlie1a DNA MER1_type 410 538 -917 1 913 707 223 190 52 chr13 43085603 43085892 -77198420 - MTD LTR MaLR -89 330 2 1 913 1181 288 49 11 chr13 43085973 43086426 -77197886 + Charlie1a DNA MER1_type 596 1065 -390 1 913 546 67 0 0 chr13 43087439 43087514 -77196798 + (TC)n Simple_repeat Simple_repeat 1 75 0 1 913 193 130 36 36 chr13 43087516 43087572 -77196740 + (CAGAGA)n Simple_repeat Simple_repeat 6 61 0 1 913 221 119 24 0 chr13 43088220 43088262 -77196050 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 913 189 94 0 0 chr13 43088301 43088333 -77195979 + (TCTG)n Simple_repeat Simple_repeat 2 33 0 1 913 2448 276 162 55 chr13 43088382 43088770 -77195542 - Lx8 LINE L1 -116 7357 6909 1 913 189 0 0 0 chr13 43088770 43088791 -77195521 + (TA)n Simple_repeat Simple_repeat 2 22 0 1 913 2448 276 162 55 chr13 43088791 43089609 -77194703 - Lx8 LINE L1 -565 6908 6022 1 913 1007 291 82 16 chr13 43089774 43090151 -77194161 + MTD LTR MaLR 18 419 0 1 913 1902 284 54 32 chr13 43090152 43090954 -77193358 - Lx8 LINE L1 -4 5843 5025 1 913 375 160 0 0 chr13 43091096 43091171 -77193141 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 913 723 317 156 35 chr13 43092484 43092931 -77191381 - L1MEc LINE L1 -2155 4164 3640 1 913 696 83 0 0 chr13 43092931 43093027 -77191285 + (TAGA)n Simple_repeat Simple_repeat 4 99 0 1 913 723 317 156 35 chr13 43093027 43093423 -77190889 - L1MEc LINE L1 -2680 3639 3220 1 913 246 200 15 77 chr13 43093474 43093539 -77190773 - tRNA-Ala-GCY_ tRNA tRNA -7 68 8 1 913 277 321 106 9 chr13 43093614 43093840 -77190472 - L1MEc LINE L1 -3223 3096 2849 1 913 351 0 0 0 chr13 43094310 43094349 -77189963 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 913 363 281 106 48 chr13 43094645 43094937 -77189375 - L1MEc LINE L1 -5992 408 100 1 913 342 0 0 0 chr13 43096059 43096097 -77188215 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1 913 1185 41 0 7 chr13 43096097 43096243 -77188069 - B1_Mm SINE Alu -2 145 1 1 913 287 284 137 60 chr13 43096448 43096812 -77187500 - HAL1 LINE L1 -893 1614 1223 1 913 4356 28 0 2 chr13 43097506 43098000 -77186312 - MT2_Mm LTR ERVL 0 493 1 1 913 693 244 49 0 chr13 43099035 43099199 -77185113 + B3A SINE B2 1 172 -26 1 913 849 228 11 43 chr13 43099257 43099445 -77184867 + B3A SINE B2 1 182 -16 1 913 288 331 0 14 chr13 43099445 43099583 -77184729 + (CA)n Simple_repeat Simple_repeat 1 136 0 1 913 291 130 0 0 chr13 43099608 43099662 -77184650 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 913 183 139 0 0 chr13 43099689 43099725 -77184587 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 913 587 181 0 6 chr13 43099752 43099913 -77184399 + (CA)n Simple_repeat Simple_repeat 1 160 0 1 913 555 227 89 45 chr13 43100784 43100941 -77183371 + RSINE1 SINE B4 2 165 0 1 913 705 56 0 0 chr13 43100942 43101032 -77183280 + (GA)n Simple_repeat Simple_repeat 2 91 0 1 913 363 211 94 10 chr13 43101039 43101135 -77183177 + PB1D9 SINE Alu 17 120 0 1 913 917 231 54 0 chr13 43101248 43101451 -77182861 + B3 SINE B2 2 215 -1 1 913 1236 28 7 0 chr13 43101650 43101794 -77182518 + B1_Mus1 SINE Alu 1 145 -3 1 913 243 0 0 0 chr13 43101794 43101821 -77182491 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 913 198 0 0 0 chr13 43102908 43102930 -77181382 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 913 1322 7 0 0 chr13 43102933 43103080 -77181232 - B1_Mm SINE Alu 0 147 1 1 913 417 20 0 0 chr13 43103174 43103224 -77181088 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 913 374 270 22 96 chr13 43103229 43103364 -77180948 - RSINE1 SINE B4 -38 127 3 1 913 1191 61 0 0 chr13 43104765 43104912 -77179400 - B1_Mus2 SINE Alu 0 147 1 1 913 417 186 0 0 chr13 43105300 43105424 -77178888 + (TG)n Simple_repeat Simple_repeat 2 125 0 1 913 747 272 6 24 chr13 43105885 43106051 -77178261 + RSINE1 SINE B4 3 165 0 1 913 393 21 0 0 chr13 43106271 43106296 -77178016 + (A)n Simple_repeat Simple_repeat 1 25 0 1 913 1169 61 0 13 chr13 43106296 43106445 -77177867 + B1_Mus2 SINE Alu 1 147 0 1 913 393 21 0 0 chr13 43106445 43106467 -77177845 + (A)n Simple_repeat Simple_repeat 1 22 0 1 913 2358 99 9 3 chr13 43107895 43108229 -77176083 + L1_Mus3 LINE L1 6252 6587 -51 1 913 236 0 0 0 chr13 43108442 43108479 -77175833 + L1_Mus4 LINE L1 6594 6630 -6 1 913 244 196 0 0 chr13 43109712 43109768 -77174544 - Lx3B LINE L1 -1 6972 6917 1 913 327 104 0 0 chr13 43109948 43109996 -77174316 + (GAAAA)n Simple_repeat Simple_repeat 2 49 0 1 913 425 204 104 31 chr13 43110013 43110109 -77174203 + B1_Mur2 SINE Alu 47 149 0 1 913 330 226 85 11 chr13 43110133 43110227 -77174085 + PB1D9 SINE Alu 11 111 -9 1 913 212 233 0 0 chr13 43110535 43110578 -77173734 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 913 632 205 61 55 chr13 43110579 43110760 -77173552 - B3A SINE B2 -16 182 1 1 913 683 276 28 9 chr13 43110768 43110980 -77173332 - B3 SINE B2 0 216 1 1 913 246 62 0 0 chr13 43111104 43111136 -77173176 + (T)n Simple_repeat Simple_repeat 1 32 0 1 913 339 306 0 83 chr13 43111744 43111865 -77172447 + ORR1E LTR MaLR 1 111 -248 1 913 314 252 180 10 chr13 43111975 43112075 -77172237 + ORR1E LTR MaLR 255 371 -8 1 913 1192 243 18 80 chr13 43112166 43112565 -77171747 - ORR1D1 LTR MaLR 0 374 1 1 913 298 275 24 24 chr13 43113506 43113588 -77170724 - ID SINE ID -142 82 1 1 913 2439 159 9 19 chr13 43114195 43114618 -77169694 - MTC LTR MaLR -2 419 1 1 913 570 67 0 0 chr13 43115623 43115698 -77168614 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 913 216 0 0 0 chr13 43115699 43115723 -77168589 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 913 827 224 1 35 chr13 43115798 43116004 -77168308 - B3A SINE B2 -19 197 1 1 913 377 265 90 15 chr13 43116209 43116343 -77167969 - MER67B LTR ERV1 -212 449 306 1 913 319 236 0 27 chr13 43116840 43116914 -77167398 - ID2 SINE ID -8 75 4 1 913 324 278 196 0 chr13 43117152 43117249 -77167063 - ID_B1 SINE B4 -25 199 84 1 913 380 318 53 35 chr13 43117337 43117451 -77166861 - PB1D10 SINE Alu -1 116 1 1 913 181 154 38 19 chr13 43117507 43117560 -77166752 + CT-rich Low_complexity Low_complexity 2 55 0 1 913 203 147 0 0 chr13 43117948 43117982 -77166330 + (C)n Simple_repeat Simple_repeat 1 34 0 1 913 22 35 0 0 chr13 43118025 43118054 -77166258 + AT_rich Low_complexity Low_complexity 1 29 0 1 913 198 0 0 0 chr13 43118181 43118203 -77166109 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1 913 829 291 129 39 chr13 43118509 43118892 -77165420 + L1MB2 LINE L1 5496 5899 -272 1 913 183 42 0 0 chr13 43118892 43118916 -77165396 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 913 829 291 129 39 chr13 43118916 43119091 -77165221 + L1MB2 LINE L1 5900 6103 -68 1 913 765 288 5 18 chr13 43119118 43119337 -77164975 + B3 SINE B2 1 216 0 2 913 1804 192 64 15 chr13 43120601 43120993 -77163319 + MTD LTR MaLR 9 419 0 2 913 736 259 5 32 chr13 43121502 43121717 -77162595 + B3A SINE B2 7 205 -11 2 913 294 333 96 14 chr13 43122355 43122501 -77161811 + MER2 DNA MER2_type 13 170 -175 2 913 25 0 0 0 chr13 43122531 43122556 -77161756 + AT_rich Low_complexity Low_complexity 1 25 0 2 914 347 214 0 41 chr13 43122723 43122796 -77161516 + L1M5 LINE L1 4496 4565 -1581 2 914 717 63 0 0 chr13 43123227 43123322 -77160990 + (TG)n Simple_repeat Simple_repeat 2 96 0 2 914 271 237 67 9 chr13 43124072 43124174 -77160138 + MLT1B LTR MaLR 315 467 0 2 914 190 316 70 20 chr13 43124403 43124503 -77159809 + MIRb SINE MIR 135 239 -29 2 914 330 250 0 0 chr13 43124694 43124762 -77159550 + tRNA-Ala-GCY_ tRNA tRNA 1 68 -7 2 914 322 293 4 2 chr13 43124762 43124790 -77159522 + ID4 SINE ID 7 103 -49 2 914 198 103 0 0 chr13 43125061 43125090 -77159222 + (GGA)n Simple_repeat Simple_repeat 3 31 0 2 914 389 126 0 59 chr13 43125093 43125152 -77159160 + (ATG)n Simple_repeat Simple_repeat 3 56 0 2 914 450 49 0 0 chr13 43125152 43125213 -77159099 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 2 914 389 126 0 59 chr13 43125213 43125254 -77159058 + (ATG)n Simple_repeat Simple_repeat 1 41 0 2 914 264 268 127 0 chr13 43125560 43125631 -77158681 - B4A SINE B4 -212 80 1 2 914 560 264 12 44 chr13 43125894 43126144 -77158168 + RMER17C LTR ERVK 1 242 -168 2 914 576 222 3 91 chr13 43126117 43126404 -77157908 + RMER17C LTR ERVK 84 345 -65 2 914 1136 82 7 0 chr13 43126405 43126551 -77157761 - B1_Mus1 SINE Alu 0 148 2 2 914 180 0 0 0 chr13 43127545 43127565 -77156747 + (ATG)n Simple_repeat Simple_repeat 2 21 0 2 914 1943 158 80 17 chr13 43128036 43128397 -77155915 - ORR1C2 LTR MaLR 0 384 1 2 914 227 254 113 0 chr13 43129268 43129339 -77154973 - ID4_ SINE ID -1 82 4 2 914 356 250 117 29 chr13 43129339 43129442 -77154870 - PB1D7 SINE Alu -8 112 1 2 914 311 255 93 47 chr13 43129354 43129461 -77154851 - ID_B1 SINE B4 -49 175 64 2 914 22 0 0 0 chr13 43130140 43130162 -77154150 + GC_rich Low_complexity Low_complexity 1 22 0 2 914 368 307 79 44 chr13 43130664 43130892 -77153420 + B4A SINE B4 1 236 -56 2 914 206 234 0 21 chr13 43130921 43130969 -77153343 + CT-rich Low_complexity Low_complexity 3 49 0 2 914 263 179 0 0 chr13 43131405 43131461 -77152851 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 914 234 62 0 0 chr13 43132057 43132089 -77152223 + (TCTCCC)n Simple_repeat Simple_repeat 2 33 0 2 914 2408 140 69 0 chr13 43133734 43134127 -77150185 - MTC LTR MaLR 0 421 2 2 914 372 22 0 0 chr13 43134239 43134284 -77150028 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 914 213 293 0 0 chr13 43135215 43135273 -77149039 + (TATATG)n Simple_repeat Simple_repeat 6 63 0 2 914 355 74 19 0 chr13 43135503 43135557 -77148755 + HAL1-3A_ME LINE L1 1980 2034 -824 2 914 1451 19 0 14 chr13 43135572 43135787 -77148525 + (GGGAGA)n Simple_repeat Simple_repeat 1 211 0 2 914 189 74 0 0 chr13 43136040 43136067 -77148245 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2 914 1254 129 57 5 chr13 43136100 43136311 -77148001 - URR1A DNA MER1_type 0 226 5 2 914 369 246 68 130 chr13 43136878 43137070 -77147242 + B3A SINE B2 1 180 -18 2 914 2410 227 47 24 chr13 43137589 43138143 -77146169 + Lx5 LINE L1 6486 7042 -8 2 914 501 62 0 0 chr13 43138721 43138786 -77145526 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 914 201 239 0 0 chr13 43138837 43138884 -77145428 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 914 297 0 0 0 chr13 43138884 43138917 -77145395 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 914 201 239 0 0 chr13 43138917 43138936 -77145376 + (TA)n Simple_repeat Simple_repeat 1 19 0 2 914 373 305 78 0 chr13 43138938 43139066 -77145246 - ORR1E LTR MaLR -8 371 234 2 914 706 291 5 14 chr13 43140313 43140526 -77143786 + MTEa LTR MaLR 2 212 -167 2 914 643 223 78 63 chr13 43140555 43140761 -77143551 - ORR1E LTR MaLR -150 209 1 2 914 451 312 49 66 chr13 43141902 43142190 -77142122 + B4A SINE B4 2 284 -8 2 914 22 0 0 0 chr13 43142641 43142663 -77141649 + AT_rich Low_complexity Low_complexity 1 22 0 2 914 819 62 21 59 chr13 43142855 43143042 -77141270 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2 914 360 0 0 0 chr13 43143080 43143120 -77141192 + (CATA)n Simple_repeat Simple_repeat 2 41 0 2 914 395 38 19 0 chr13 43143145 43143198 -77141114 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2 914 768 73 16 16 chr13 43143216 43143342 -77140970 + (GAAA)n Simple_repeat Simple_repeat 3 128 0 2 914 216 97 0 0 chr13 43143363 43143394 -77140918 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 2 914 371 285 16 16 chr13 43143398 43143523 -77140789 + GA-rich Low_complexity Low_complexity 5 129 0 2 914 31 0 0 0 chr13 43143737 43143768 -77140544 + AT_rich Low_complexity Low_complexity 1 31 0 2 914 203 278 155 9 chr13 43143988 43144104 -77140208 - MIRb SINE MIR -134 134 2 2 914 649 240 53 174 chr13 43144766 43145145 -77139167 - Lx8 LINE L1 -7 7466 7134 2 914 700 262 57 5 chr13 43145157 43145368 -77138944 + B4 SINE B4 3 224 -68 2 914 1317 275 44 14 chr13 43145369 43145734 -77138578 + Lx5 LINE L1 6633 7008 -42 2 914 464 45 30 0 chr13 43145755 43145821 -77138491 + (CATA)n Simple_repeat Simple_repeat 2 69 0 2 914 21 36 0 0 chr13 43146462 43146490 -77137822 + AT_rich Low_complexity Low_complexity 1 28 0 2 914 487 208 0 10 chr13 43146955 43147052 -77137260 - MTE2a LTR MaLR -202 177 82 2 914 416 222 88 19 chr13 43147049 43147180 -77137132 - MTEb LTR MaLR -221 158 20 2 914 865 237 88 9 chr13 43147562 43147779 -77136533 - 7SK RNA RNA -97 234 1 2 914 423 0 0 0 chr13 43148076 43148123 -77136189 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 914 404 128 13 0 chr13 43148133 43148211 -77136101 + (TGGA)n Simple_repeat Simple_repeat 3 81 0 2 914 841 222 67 21 chr13 43148700 43148893 -77135419 - B3 SINE B2 -14 202 1 2 914 306 0 0 0 chr13 43150476 43150510 -77133802 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 914 736 145 0 76 chr13 43151011 43151144 -77133168 - Lx7 LINE L1 0 7696 7573 2 914 288 0 0 0 chr13 43151144 43151176 -77133136 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 914 736 145 0 76 chr13 43151176 43151199 -77133113 - Lx7 LINE L1 -124 7572 7552 2 914 3373 193 56 35 chr13 43151221 43151899 -77132413 - Lx7 LINE L1 -653 7043 6352 2 914 278 311 0 0 chr13 43152086 43152160 -77132152 + B3A SINE B2 43 116 -82 2 914 686 251 43 32 chr13 43153994 43154179 -77130133 + ID_B1 SINE B4 21 207 -17 2 914 238 358 0 9 chr13 43154696 43154803 -77129509 + CT-rich Low_complexity Low_complexity 2 107 0 2 914 522 176 29 0 chr13 43155645 43155747 -77128565 + PB1D10 SINE Alu 6 110 -7 2 914 3815 151 9 22 chr13 43155970 43156619 -77127693 - Lx2B LINE L1 0 7000 6360 2 914 796 319 79 3 chr13 43157443 43157761 -77126551 + MER2 DNA MER2_type 4 345 0 2 914 539 262 7 20 chr13 43158114 43158262 -77126050 + B1_Mur1 SINE Alu 4 149 0 2 914 928 236 35 0 chr13 43159946 43160145 -77124167 + B3 SINE B2 2 207 -9 2 914 572 256 65 49 chr13 43160246 43160431 -77123881 + MER2 DNA MER2_type 158 345 0 2 914 447 19 0 0 chr13 43160611 43160663 -77123649 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 914 270 374 106 27 chr13 43161016 43161384 -77122928 - MER74B LTR ERVL -82 540 144 2 914 645 14 0 0 chr13 43161557 43161631 -77122681 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 914 2295 102 6 58 chr13 43162160 43162505 -77121807 - ORR1A2 LTR MaLR 0 327 1 2 914 186 367 9 60 chr13 43166407 43166523 -77117789 - MIR SINE MIR -71 137 28 2 914 5328 157 197 15 chr13 43166726 43167843 -77116469 - RMER12 LTR ERVK -2 1320 1 2 914 1095 55 7 58 chr13 43167861 43168007 -77116305 + B1_Mus2 SINE Alu 2 138 -9 2 914 261 0 0 0 chr13 43168007 43168036 -77116276 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 914 209 342 43 65 chr13 43168120 43168348 -77115964 - L2a LINE L2 -23 3403 3131 2 914 278 278 43 191 chr13 43169235 43169466 -77114846 + B3A SINE B2 2 198 0 2 914 1178 101 67 0 chr13 43169628 43169784 -77114528 + B2_Mm1a SINE B2 4 160 -33 2 914 276 53 0 0 chr13 43169784 43169822 -77114490 + (CATA)n Simple_repeat Simple_repeat 1 38 0 2 914 1178 101 67 0 chr13 43169822 43169843 -77114469 + B2_Mm1a SINE B2 161 192 -1 2 914 1222 41 7 0 chr13 43169889 43170035 -77114277 + B1_Mm SINE Alu 1 147 0 2 914 195 69 0 0 chr13 43170039 43170068 -77114244 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 914 467 231 29 65 chr13 43170080 43170219 -77114093 + B3A SINE B2 65 198 0 2 914 279 0 0 0 chr13 43171462 43171493 -77112819 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 914 180 0 0 0 chr13 43171494 43171514 -77112798 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 914 223 282 0 40 chr13 43171740 43171814 -77112498 + C-rich Low_complexity Low_complexity 2 72 0 2 914 276 248 0 0 chr13 43171918 43172019 -77112293 + (CA)n Simple_repeat Simple_repeat 2 102 0 2 914 299 302 10 20 chr13 43172148 43172246 -77112066 - PB1D10 SINE Alu -7 110 14 2 914 234 0 0 0 chr13 43172319 43172345 -77111967 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 914 757 229 73 62 chr13 43173584 43173851 -77110461 + B4 SINE B4 41 286 -6 2 914 192 97 0 0 chr13 43173872 43173903 -77110409 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 914 281 215 31 0 chr13 43174962 43175027 -77109285 + MER5C DNA MER1_type 77 143 -170 3 914 1193 74 0 0 chr13 43175068 43175216 -77109096 - B1_Mus1 SINE Alu 0 148 1 3 914 25 31 0 0 chr13 43175276 43175308 -77109004 + AT_rich Low_complexity Low_complexity 1 32 0 3 914 1107 174 31 0 chr13 43175326 43175522 -77108790 + B3 SINE B2 1 202 -14 3 914 2700 94 42 10 chr13 43175581 43175989 -77108323 - BGLII LTR ERVK 0 421 1 3 914 993 116 0 0 chr13 43176033 43176188 -77108124 + (TC)n Simple_repeat Simple_repeat 2 156 0 3 914 203 291 62 69 chr13 43177354 43177498 -77106814 - L3 LINE CR1 -287 4202 4060 3 914 420 370 19 24 chr13 43177642 43177855 -77106457 + MIR SINE MIR 39 250 -12 3 914 438 20 0 0 chr13 43177951 43178002 -77106310 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 914 210 326 21 52 chr13 43178250 43178347 -77105965 + L2 LINE L2 2475 2568 -851 3 914 415 309 110 39 chr13 43178574 43178896 -77105416 - MLT1B LTR MaLR -7 383 20 3 914 238 289 24 12 chr13 43178925 43179009 -77105303 - L2b LINE L2 -4 3371 3287 3 914 2054 101 35 78 chr13 43179187 43179531 -77104781 + ORR1A4 LTR MaLR 1 329 0 3 914 322 298 64 0 chr13 43179756 43179850 -77104462 + PB1D10 SINE Alu 11 110 -7 3 914 771 259 52 42 chr13 43180120 43180313 -77103999 + ID_B1 SINE B4 24 218 -6 3 914 2360 67 31 13 chr13 43181821 43182138 -77102174 + ORR1A2 LTR MaLR 5 327 0 3 914 834 205 13 0 chr13 43182592 43182748 -77101564 + RSINE1 SINE B4 4 161 -4 3 914 245 302 103 8 chr13 43183314 43183431 -77100881 + L2a LINE L2 3256 3383 -43 3 914 277 362 0 0 chr13 43183609 43183703 -77100609 + ID_B1 SINE B4 82 175 -49 3 914 444 202 53 0 chr13 43183630 43183724 -77100588 + PB1D7 SINE Alu 22 120 0 3 914 1112 240 54 18 chr13 43183729 43184005 -77100307 + B4A SINE B4 1 286 -6 3 914 763 288 83 33 chr13 43184869 43185145 -77099167 + B4 SINE B4 3 292 0 3 914 234 122 0 0 chr13 43185179 43185193 -77099119 + (GAA)n Simple_repeat Simple_repeat 2 15 0 3 914 1069 118 0 11 chr13 43185193 43185373 -77098939 + (GGA)n Simple_repeat Simple_repeat 1 178 0 3 914 234 122 0 0 chr13 43185373 43185399 -77098913 + (GAA)n Simple_repeat Simple_repeat 1 26 0 3 914 329 111 0 0 chr13 43186533 43186578 -77097734 - HAL1-3A_ME LINE L1 -841 2017 1973 3 914 450 143 0 0 chr13 43186590 43186667 -77097645 + (TG)n Simple_repeat Simple_repeat 2 78 0 3 914 301 191 0 113 chr13 43186668 43186739 -77097573 - B1F1 SINE Alu -86 63 1 3 914 257 293 0 0 chr13 43186874 43186932 -77097380 + MER20 DNA MER1_type 105 162 -57 3 914 21 0 0 0 chr13 43187312 43187333 -77096979 + AT_rich Low_complexity Low_complexity 1 21 0 3 914 1358 209 44 130 chr13 43187344 43187751 -77096561 - ORR1D1 LTR MaLR 0 374 3 3 914 379 244 0 0 chr13 43188729 43188807 -77095505 + ID4 SINE ID 5 82 -1 3 914 195 271 0 0 chr13 43188812 43188871 -77095441 + GA-rich Low_complexity Low_complexity 2 60 0 3 914 36 0 0 0 chr13 43188901 43188937 -77095375 + AT_rich Low_complexity Low_complexity 1 36 0 3 914 1504 243 91 28 chr13 43188945 43189373 -77094939 - Lx6 LINE L1 0 7460 7006 3 914 239 127 169 68 chr13 43189896 43189955 -77094357 - L1MB3 LINE L1 -57 6126 6062 3 914 207 167 0 0 chr13 43190312 43190348 -77093964 + GA-rich Low_complexity Low_complexity 1 36 0 3 914 209 291 59 107 chr13 43192624 43192793 -77091519 - MIR SINE MIR -10 252 92 3 914 333 0 0 0 chr13 43192993 43193030 -77091282 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 914 186 276 152 38 chr13 43193073 43193205 -77091107 - L3 LINE CR1 -121 4368 4222 3 914 727 291 117 19 chr13 43194817 43195125 -77089187 + ORR1E LTR MaLR 2 339 -20 3 914 597 246 0 56 chr13 43195517 43195659 -77088653 + ID_B1 SINE B4 76 209 -15 3 914 1086 73 36 0 chr13 43195673 43195896 -77088416 + (TGGA)n Simple_repeat Simple_repeat 1 231 0 3 914 405 0 0 0 chr13 43196267 43196312 -77088000 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 914 580 302 0 74 chr13 43196749 43196924 -77087388 + RSINE1 SINE B4 4 165 0 3 914 287 366 28 69 chr13 43197185 43197329 -77086983 - MLT1B LTR MaLR -1 466 329 3 914 382 263 229 29 chr13 43197391 43197644 -77086668 - MLT1B LTR MaLR -159 308 6 3 914 663 189 0 0 chr13 43197967 43198099 -77086213 + (TA)n Simple_repeat Simple_repeat 2 133 0 3 914 413 294 106 84 chr13 43198149 43198424 -77085888 - ORR1E LTR MaLR -73 286 6 3 914 995 227 25 0 chr13 43199926 43200129 -77084183 + B3 SINE B2 9 216 0 3 914 1680 238 46 27 chr13 43200406 43200801 -77083511 - MTD LTR MaLR 0 419 16 3 914 216 86 0 0 chr13 43200801 43200836 -77083476 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 914 1680 238 46 27 chr13 43200836 43200851 -77083461 - MTD LTR MaLR -404 15 1 3 914 228 324 0 0 chr13 43201023 43201094 -77083218 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 914 195 49 48 24 chr13 43201382 43201424 -77082888 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 914 227 330 58 42 chr13 43201643 43201763 -77082549 - MLT1K LTR MaLR -208 387 266 3 914 210 350 18 32 chr13 43201836 43201951 -77082361 - MIRb SINE MIR -27 241 123 3 914 486 304 39 39 chr13 43202298 43202452 -77081860 + MER5A DNA MER1_type 18 171 -18 3 914 255 321 12 0 chr13 43202567 43202648 -77081664 - PB1D10 SINE Alu -34 83 2 3 914 277 301 0 14 chr13 43202784 43202858 -77081454 + ID4_ SINE ID 1 73 -10 3 914 664 292 29 6 chr13 43203025 43203197 -77081115 + ID_B1 SINE B4 49 224 0 3 914 315 71 0 0 chr13 43203197 43203239 -77081073 + (GGAA)n Simple_repeat Simple_repeat 4 45 0 3 914 956 97 30 0 chr13 43203439 43203573 -77080739 + B2_Mm2 SINE B2 2 139 -56 3 914 409 213 69 38 chr13 43203584 43203702 -77080610 + B3A SINE B2 36 180 -36 3 914 612 144 0 49 chr13 43203941 43204043 -77080269 + B1_Mur2 SINE Alu 52 148 -1 3 914 360 0 0 0 chr13 43205272 43205312 -77079000 + (TAA)n Simple_repeat Simple_repeat 3 42 0 3 914 560 231 84 0 chr13 43205313 43205456 -77078856 + B3A SINE B2 5 159 -39 3 914 405 0 0 0 chr13 43205467 43205512 -77078800 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 914 250 87 0 42 chr13 43205512 43205559 -77078753 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 914 3290 164 31 21 chr13 43205896 43206742 -77077570 - RMER19A LTR ERVK -98 639 7 3 914 629 238 7 20 chr13 43208246 43208392 -77075920 - ID_B1 SINE B4 -3 221 78 3 914 376 306 9 0 chr13 43208520 43208628 -77075684 - PB1D10 SINE Alu -8 109 1 3 914 1808 179 59 64 chr13 43210346 43210735 -77073577 - MTD LTR MaLR -32 387 1 3 914 737 233 7 27 chr13 43210894 43211044 -77073268 + B1_Mur2 SINE Alu 3 149 0 3 914 247 278 105 76 chr13 43211914 43212019 -77072293 + RSINE1 SINE B4 57 164 -1 3 914 228 182 0 0 chr13 43212576 43212620 -77071692 + C-rich Low_complexity Low_complexity 1 44 0 3 914 628 211 61 156 chr13 43212730 43212978 -77071334 - RCHARR1 DNA MER1_type -2 972 748 3 914 837 315 14 32 chr13 43212975 43213257 -77071055 - RCHARR1 DNA MER1_type -505 469 193 3 914 348 325 113 70 chr13 43213560 43213861 -77070451 + MLT1A1 LTR MaLR 23 336 -38 3 914 367 160 92 28 chr13 43214641 43214737 -77069575 + MLT1A1 LTR MaLR 302 459 -8 3 914 242 224 79 45 chr13 43214728 43214817 -77069495 - RLTR22_Mur LTR ERVK -721 1127 1036 3 914 712 185 41 169 chr13 43215241 43215436 -77068876 - MTE2b LTR MaLR -209 170 1 3 914 869 124 6 0 chr13 43215781 43215942 -77068370 + (TG)n Simple_repeat Simple_repeat 1 162 0 3 914 246 32 0 0 chr13 43215942 43215973 -77068339 + (GA)n Simple_repeat Simple_repeat 1 31 0 3 914 353 285 48 24 chr13 43216384 43216510 -77067802 - MER21B LTR ERV1 -320 543 415 3 914 281 299 62 0 chr13 43216575 43216672 -77067640 - MER21B LTR ERV1 -663 200 98 3 914 225 0 0 0 chr13 43219631 43219656 -77064656 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 3 914 732 221 7 7 chr13 43219692 43219838 -77064474 - RSINE1 SINE B4 -17 148 3 3 914 306 151 214 34 chr13 43219892 43219981 -77064331 + PB1D10 SINE Alu 4 108 -9 3 914 342 0 0 0 chr13 43220635 43220673 -77063639 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 914 302 269 116 32 chr13 43220804 43220840 -77063472 - B1_Mur3 SINE Alu 0 149 5 3 914 485 221 52 17 chr13 43220840 43220955 -77063357 - ID_B1 SINE B4 -20 204 86 3 914 224 383 9 9 chr13 43221522 43221638 -77062674 + MIR3 SINE MIR 59 174 -34 3 914 26 30 0 0 chr13 43221829 43221862 -77062450 + AT_rich Low_complexity Low_complexity 1 33 0 3 914 581 206 91 45 chr13 43223918 43224050 -77060262 + B1_Mur1 SINE Alu 12 149 0 3 914 379 291 72 29 chr13 43223928 43224066 -77060246 + B4A SINE B4 103 246 -46 3 914 332 167 0 14 chr13 43224066 43224139 -77060173 + GA-rich Low_complexity Low_complexity 3 74 0 3 914 451 257 78 19 chr13 43224157 43224260 -77060052 + B1F SINE Alu 5 113 -36 3 914 722 109 0 8 chr13 43225080 43225200 -77059112 + (GAAA)n Simple_repeat Simple_repeat 2 120 0 3 914 1367 91 21 0 chr13 43225231 43225417 -77058895 - B2_Mm2 SINE B2 -4 191 2 3 914 424 280 28 70 chr13 43226742 43226884 -77057428 - B1F SINE Alu -13 136 1 3 914 237 276 120 56 chr13 43229409 43229551 -77054761 - B4A SINE B4 -26 266 116 3 914 474 183 16 107 chr13 43229451 43229569 -77054743 - B1F1 SINE Alu -2 125 9 3 914 315 281 72 92 chr13 43229704 43229857 -77054455 + B1_Mur4 SINE Alu 1 150 0 3 914 680 89 10 0 chr13 43230673 43230774 -77053538 + (GAAA)n Simple_repeat Simple_repeat 3 104 0 3 914 246 231 0 0 chr13 43231140 43231192 -77053120 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 914 279 0 0 0 chr13 43231754 43231785 -77052527 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 914 22 35 0 0 chr13 43233864 43233893 -77050419 + AT_rich Low_complexity Low_complexity 1 29 0 4 914 228 275 204 21 chr13 43234301 43234394 -77049918 + MER2 DNA MER2_type 18 127 -218 4 914 307 301 82 89 chr13 43234433 43234457 -77049855 + MER2 DNA MER2_type 212 227 -118 4 914 2466 98 3 0 chr13 43234457 43234783 -77049529 + ORR1A2 LTR MaLR 1 327 0 4 914 307 301 82 89 chr13 43234783 43234893 -77049419 + MER2 DNA MER2_type 228 345 0 4 914 254 328 78 0 chr13 43235112 43235228 -77049084 - MER5A1 DNA MER1_type -29 137 13 4 914 195 271 42 0 chr13 43235731 43235779 -77048533 + MIRm SINE MIR 103 152 -124 4 914 465 256 235 30 chr13 43235847 43236081 -77048231 - B4A SINE B4 -9 283 2 4 914 444 200 159 8 chr13 43236138 43236264 -77048048 - B1F SINE Alu -3 146 2 4 914 782 224 7 20 chr13 43237187 43237337 -77046975 - B1_Mur1 SINE Alu 0 149 2 4 914 336 135 0 0 chr13 43237433 43237507 -77046805 + (T)n Simple_repeat Simple_repeat 1 74 0 4 914 1121 49 0 0 chr13 43237507 43237649 -77046663 - B1_Mus2 SINE Alu 0 147 6 4 914 245 204 0 18 chr13 43237894 43237949 -77046363 + 4.5SRNA scRNA scRNA 33 86 -8 4 914 425 217 33 0 chr13 43237900 43237992 -77046320 + B1F SINE Alu 40 134 -15 4 914 311 258 67 11 chr13 43238013 43238107 -77046205 + ID4 SINE ID 9 103 -49 4 914 547 128 244 17 chr13 43238842 43238961 -77045351 + B1_Mus1 SINE Alu 2 147 -1 4 914 337 226 95 0 chr13 43238963 43239047 -77045265 - B1F SINE Alu -16 133 42 4 914 351 248 205 72 chr13 43239150 43239361 -77044951 - MLT1J LTR MaLR -59 551 238 4 914 393 245 216 55 chr13 43239452 43239651 -77044661 - B4 SINE B4 -59 233 3 4 914 668 244 0 0 chr13 43239992 43240119 -77044193 - ID_B1 SINE B4 -14 210 84 4 914 231 295 19 87 chr13 43240026 43240130 -77044182 - MT2B2 LTR ERVL -333 251 155 4 914 318 106 0 0 chr13 43240772 43240819 -77043493 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 914 213 121 0 0 chr13 43240848 43240881 -77043431 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 914 274 311 54 0 chr13 43240881 43240955 -77043357 - B4 SINE B4 0 292 215 4 914 1004 245 98 59 chr13 43241002 43241480 -77042832 - Lx7 LINE L1 -16 7680 7068 4 914 816 201 121 51 chr13 43241482 43241697 -77042615 - B4 SINE B4 -62 230 1 4 914 282 338 173 5 chr13 43242901 43243103 -77041209 + L1MA5 LINE L1 6012 6247 -53 4 914 306 333 42 17 chr13 43243173 43243292 -77041020 + RSINE1 SINE B4 44 165 0 4 914 257 262 13 0 chr13 43243354 43243429 -77040883 + ID4 SINE ID 30 104 -48 4 914 747 137 0 0 chr13 43243429 43243553 -77040759 + (GGGA)n Simple_repeat Simple_repeat 1 124 0 4 914 367 223 165 0 chr13 43243809 43243912 -77040400 - PB1D7 SINE Alu 0 120 1 4 914 235 274 57 0 chr13 43244441 43244565 -77039747 + (CA)n Simple_repeat Simple_repeat 1 131 0 4 914 218 250 69 0 chr13 43244638 43244782 -77039530 + (CATATA)n Simple_repeat Simple_repeat 1 153 0 4 914 992 264 28 24 chr13 43245571 43245858 -77038454 + B4 SINE B4 4 291 -1 4 914 527 195 80 0 chr13 43246617 43246730 -77037582 + B1F1 SINE Alu 27 148 -1 4 914 444 254 8 41 chr13 43248158 43248281 -77036031 + B1F SINE Alu 2 120 -29 4 914 793 290 72 58 chr13 43249030 43249308 -77035004 - B4A SINE B4 -2 290 9 4 914 930 125 7 0 chr13 43249511 43249655 -77034657 - URR1B DNA MER1_type 0 225 81 4 914 339 295 32 0 chr13 43250584 43250679 -77033633 + PB1D10 SINE Alu 16 113 -4 4 914 683 302 39 50 chr13 43250679 43250946 -77033366 + B4A SINE B4 2 269 -23 4 914 327 49 0 0 chr13 43250946 43250987 -77033325 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 914 683 302 39 50 chr13 43250987 43250998 -77033314 + B4A SINE B4 270 277 -15 4 914 189 139 0 0 chr13 43251350 43251393 -77032919 + (TCTCTG)n Simple_repeat Simple_repeat 6 48 0 4 914 963 259 5 0 chr13 43251418 43251619 -77032693 - B3 SINE B2 -13 203 2 4 914 31 0 0 0 chr13 43251852 43251883 -77032429 + AT_rich Low_complexity Low_complexity 1 31 0 4 914 1383 78 5 35 chr13 43251885 43252085 -77032227 - B2_Mm2 SINE B2 0 195 2 4 914 717 234 84 17 chr13 43252096 43252274 -77032038 - B3A SINE B2 -8 190 1 4 914 356 239 0 14 chr13 43252523 43252595 -77031717 + PB1D10 SINE Alu 42 112 -5 4 914 270 276 35 0 chr13 43252705 43252763 -77031549 + ID4 SINE ID 2 61 -22 4 914 180 281 18 0 chr13 43252875 43252932 -77031380 + MIRc SINE MIR 86 143 -125 4 914 381 292 35 0 chr13 43253117 43253230 -77031082 - PB1D10 SINE Alu 0 117 1 4 914 356 211 0 27 chr13 43253436 43253502 -77030810 + ID_B1 SINE B4 151 215 -9 4 914 378 0 0 0 chr13 43253502 43253544 -77030768 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 915 1195 22 0 0 chr13 43255438 43255577 -77028735 + B2_Mm2 SINE B2 2 140 -55 4 915 198 103 0 0 chr13 43255585 43255614 -77028698 + (TATATG)n Simple_repeat Simple_repeat 2 30 0 4 915 495 87 0 0 chr13 43255614 43255683 -77028629 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 915 262 212 16 6 chr13 43256257 43256322 -77027990 + AluF_3 SINE Alu 156 198 -113 4 915 302 300 22 0 chr13 43256349 43256439 -77027873 + ZP3AR Satellite Satellite 42 133 -79 4 915 291 246 16 0 chr13 43256408 43256469 -77027843 + tRNA-Ala-GCA tRNA tRNA 2 63 -12 4 915 331 262 67 19 chr13 43256693 43256798 -77027514 - PB1D10 SINE Alu -7 110 1 4 915 261 264 56 0 chr13 43257116 43257188 -77027124 + ID4 SINE ID 3 78 -5 4 915 434 275 304 34 chr13 43257216 43257544 -77026768 + L1MC4 LINE L1 6666 7081 -961 4 915 687 239 0 35 chr13 43257680 43257823 -77026489 + B1_Mur1 SINE Alu 11 148 -1 4 915 38 22 0 0 chr13 43257823 43257868 -77026444 + AT_rich Low_complexity Low_complexity 1 45 0 4 915 440 204 34 23 chr13 43257870 43258046 -77026266 + (TA)n Simple_repeat Simple_repeat 1 178 0 4 915 263 279 154 0 chr13 43258085 43258189 -77026123 + L1MC4 LINE L1 7270 7389 -653 4 915 364 375 85 12 chr13 43258309 43258568 -77025744 + L1MC4 LINE L1 7601 7878 -4 4 915 511 338 65 31 chr13 43258615 43259061 -77025251 + L1MC4 LINE L1 7241 7701 -341 4 915 451 235 8 34 chr13 43259275 43259394 -77024918 + PB1D10 SINE Alu 1 116 -1 4 915 607 201 158 36 chr13 43259401 43259566 -77024746 + B3 SINE B2 23 207 -9 4 915 204 222 0 0 chr13 43259586 43259622 -77024690 + polypurine Low_complexity Low_complexity 2 37 0 4 915 227 260 24 61 chr13 43259622 43259704 -77024608 + L1MC4 LINE L1 7911 7989 -53 4 915 188 321 11 69 chr13 43260011 43260098 -77024214 - L2 LINE L2 -500 2919 2838 4 915 1202 117 11 16 chr13 43260123 43260305 -77024007 + B2_Mm2 SINE B2 1 181 -14 4 915 427 145 13 0 chr13 43260357 43260433 -77023879 + Lx3C LINE L1 6896 6972 -4 4 915 297 128 0 0 chr13 43260433 43260480 -77023832 + (TAG)n Simple_repeat Simple_repeat 2 48 0 4 915 253 222 0 0 chr13 43260488 43260533 -77023779 + ZP3AR Satellite Satellite 38 82 -130 4 915 310 301 0 14 chr13 43260496 43260595 -77023717 + ID2 SINE ID 4 98 -54 4 915 504 165 0 0 chr13 43261334 43261449 -77022863 + (TG)n Simple_repeat Simple_repeat 2 116 0 4 915 466 229 68 61 chr13 43261450 43261613 -77022699 - RSINE1 SINE B4 0 165 2 4 915 299 335 61 41 chr13 43261922 43262118 -77022194 + MIRb SINE MIR 35 234 -34 4 915 350 214 14 0 chr13 43264505 43264575 -77019737 + tRNA-Ala-GCY_ tRNA tRNA 5 75 0 4 915 441 261 33 60 chr13 43264805 43264956 -77019356 - B1_Mur2 SINE Alu -1 148 2 4 915 324 0 0 0 chr13 43265049 43265085 -77019227 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 915 323 202 198 23 chr13 43265699 43265785 -77018527 - PB1D9 SINE Alu -8 112 12 4 915 214 45 64 43 chr13 43265886 43265933 -77018379 + T-rich Low_complexity Low_complexity 3 50 0 4 915 919 237 18 41 chr13 43267243 43267463 -77016849 + B3 SINE B2 2 216 0 4 915 445 304 179 20 chr13 43267485 43267737 -77016575 - MER89 LTR ERV1 -23 536 245 4 915 2185 128 122 5 chr13 43268001 43268369 -77015943 + MTC LTR MaLR 1 411 -10 4 915 305 257 8 117 chr13 43269009 43269137 -77015175 + ORR1E LTR MaLR 17 130 -244 4 915 467 245 36 36 chr13 43269303 43269413 -77014899 - PB1D10 SINE Alu -1 116 7 4 915 278 315 31 42 chr13 43269330 43269426 -77014886 - B4A SINE B4 -119 173 79 4 915 418 250 90 7 chr13 43269529 43269674 -77014638 + MER5C DNA MER1_type 56 212 -101 4 915 201 74 0 0 chr13 43269756 43269783 -77014529 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4 915 972 129 7 0 chr13 43269840 43269979 -77014333 + B1_Mus1 SINE Alu 8 147 -1 4 915 283 203 17 0 chr13 43270000 43270059 -77014253 - ID4 SINE ID -22 61 2 4 915 248 299 45 0 chr13 43270134 43270201 -77014111 + B1F1 SINE Alu 32 101 -48 4 915 359 264 29 162 chr13 43270754 43270984 -77013328 + MLT1A LTR MaLR 1 204 -170 4 915 1735 137 99 29 chr13 43271764 43272147 -77012165 - RMER17C LTR ERVK 0 410 1 4 915 1593 169 95 18 chr13 43272331 43272668 -77011644 - ORR1C2 LTR MaLR -5 379 17 4 915 340 208 11 125 chr13 43272703 43272791 -77011521 - ID SINE ID -144 80 3 4 915 634 258 150 69 chr13 43272934 43273180 -77011132 - MTEa LTR MaLR -5 374 109 4 915 1048 228 19 0 chr13 43273319 43273525 -77010787 + B3 SINE B2 1 210 -6 4 915 189 361 89 56 chr13 43273696 43273875 -77010437 - L2 LINE L2 -599 2820 2636 4 915 960 295 16 10 chr13 43273924 43274213 -77010099 - B4A SINE B4 -2 290 6 5 915 705 271 77 84 chr13 43274753 43275027 -77009285 + LTR41 LTR ERVL 494 765 -3 5 915 303 341 77 16 chr13 43275106 43275288 -77009024 - L2 LINE L2 -1172 2247 2055 4 915 1031 57 43 0 chr13 43275320 43275461 -77008851 + B1_Mus1 SINE Alu 2 148 0 5 915 838 196 0 13 chr13 43276078 43276228 -77008084 - B1_Mus1 SINE Alu 0 148 1 5 915 210 71 0 0 chr13 43276259 43276287 -77008025 + (TGG)n Simple_repeat Simple_repeat 3 30 0 5 915 394 150 62 0 chr13 43276337 43276533 -77007779 + L1_Mus2 LINE L1 6482 6566 0 5 915 602 205 47 8 chr13 43276641 43276769 -77007543 - RSINE1 SINE B4 -21 144 12 5 915 1072 244 5 5 chr13 43277154 43277360 -77006952 + ID_B1 SINE B4 2 207 -17 5 915 316 256 94 0 chr13 43278504 43278621 -77005691 - L1MB3 LINE L1 -4 6179 6052 5 915 358 181 68 20 chr13 43278646 43278741 -77005571 - B1_Mm SINE Alu -2 145 31 5 915 660 170 0 0 chr13 43278874 43278980 -77005332 - B2_Mm2 SINE B2 -88 107 2 5 915 1159 197 9 32 chr13 43279060 43279190 -77005122 - B3 SINE B2 -1 215 84 5 915 2192 127 61 14 chr13 43279190 43279551 -77004761 + ORR1C1 LTR MaLR 1 378 0 5 915 1159 197 9 32 chr13 43279551 43279640 -77004672 - B3 SINE B2 -133 83 1 5 915 255 31 0 0 chr13 43279774 43279806 -77004506 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 915 404 281 75 48 chr13 43279882 43280110 -77004202 - L1MA4 LINE L1 -400 5900 5667 5 915 1336 170 51 57 chr13 43280437 43280787 -77003525 + RMER17C LTR ERVK 1 348 -62 5 915 245 211 0 101 chr13 43280806 43280885 -77003427 - L1MA4 LINE L1 -937 5360 5290 5 915 264 114 0 0 chr13 43280888 43280923 -77003389 - B1_Mur4 SINE Alu -115 35 1 5 915 547 302 206 3 chr13 43280924 43281260 -77003052 - L1MA4 LINE L1 -1198 4945 4577 5 915 1341 94 0 6 chr13 43281475 43281656 -77002656 - B2_Mm2 SINE B2 -14 181 2 5 915 1041 201 15 15 chr13 43281732 43281934 -77002378 + B3 SINE B2 5 206 -10 5 915 1321 301 116 28 chr13 43282066 43282981 -77001331 - Lx8 LINE L1 -1547 5926 4904 5 915 2109 146 37 6 chr13 43282986 43283338 -77000974 - ORR1B1 LTR MaLR 0 394 32 5 915 619 212 0 86 chr13 43283455 43283594 -77000718 - RSINE1 SINE B4 0 165 39 5 915 1772 289 64 116 chr13 43283642 43284023 -77000289 - L1M2 LINE L1 -1307 4836 4434 5 915 935 191 90 0 chr13 43284023 43284211 -77000101 + B3 SINE B2 3 207 -9 5 915 1772 289 64 116 chr13 43284211 43284781 -76999531 - L1M2 LINE L1 -1710 4433 3956 5 915 964 205 53 39 chr13 43284781 43284989 -76999323 - B3 SINE B2 -4 212 2 5 915 1772 289 64 116 chr13 43284989 43285368 -76998944 - L1M2 LINE L1 -2188 3955 3574 5 915 1169 49 0 40 chr13 43285469 43285619 -76998693 + B1_Mm SINE Alu 2 145 -2 5 915 323 282 89 0 chr13 43285628 43285752 -76998560 - L1M2 LINE L1 -3211 2932 2798 5 915 440 222 48 9 chr13 43286062 43286226 -76998086 - L1MA4 LINE L1 -3357 2789 2627 5 915 343 314 52 93 chr13 43286230 43286423 -76997889 - L1MA4 LINE L1 -3470 2673 2489 5 915 210 154 0 0 chr13 43287863 43287902 -76996410 + T-rich Low_complexity Low_complexity 3 41 0 5 915 1111 88 0 20 chr13 43287902 43288052 -76996260 - B1_Mus1 SINE Alu 0 148 2 5 915 364 174 23 23 chr13 43288052 43288140 -76996172 + RCHARR1 DNA MER1_type 448 535 -439 5 915 538 260 33 40 chr13 43288227 43288379 -76995933 - RSINE1 SINE B4 -12 153 3 5 915 549 269 27 7 chr13 43288387 43288537 -76995775 + MER2 DNA MER2_type 188 340 -5 5 915 306 195 245 26 chr13 43289237 43289344 -76994968 + B1_Mur2 SINE Alu 27 148 0 5 915 297 311 11 11 chr13 43290193 43290284 -76994028 - ID_B1 SINE B4 -57 167 77 5 915 26 0 0 0 chr13 43291177 43291203 -76993109 + AT_rich Low_complexity Low_complexity 1 26 0 5 915 309 288 0 0 chr13 43292236 43292309 -76992003 + ID4 SINE ID 1 73 -10 5 915 240 267 17 0 chr13 43293169 43293229 -76991083 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 915 198 0 0 0 chr13 43294391 43294413 -76989899 + (TCTG)n Simple_repeat Simple_repeat 3 24 0 5 915 638 174 0 17 chr13 43297796 43297913 -76986399 + B1_Mus2 SINE Alu 33 147 0 5 915 1122 70 42 0 chr13 43298131 43298273 -76986039 - B1_Mus1 SINE Alu 0 148 1 5 915 227 330 66 33 chr13 43300020 43300142 -76984170 - L2c LINE L2 -168 3219 3094 5 915 687 216 28 14 chr13 43300336 43300477 -76983835 + B3A SINE B2 1 143 -55 5 915 727 160 8 40 chr13 43300496 43300620 -76983692 - PB1D9 SINE Alu 0 120 1 5 915 180 0 0 0 chr13 43300906 43300926 -76983386 + (CA)n Simple_repeat Simple_repeat 2 21 0 5 915 547 266 107 6 chr13 43301154 43301313 -76982999 + B3A SINE B2 1 175 -23 5 915 235 167 0 45 chr13 43302559 43302603 -76981709 + MER66C LTR ERV1 455 496 -59 5 915 2466 63 38 3 chr13 43302929 43303245 -76981067 + ORR1A2 LTR MaLR 1 327 0 5 915 330 223 80 88 chr13 43303274 43303387 -76980925 + ORR1E LTR MaLR 79 190 -169 5 915 1214 69 0 0 chr13 43303726 43303870 -76980442 + B1_Mm SINE Alu 1 144 -3 5 915 238 26 25 25 chr13 43303870 43303910 -76980402 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5 915 444 251 72 47 chr13 43304036 43304235 -76980077 + RMER20B LTR ERVK 90 286 -230 5 915 21 0 0 0 chr13 43304324 43304345 -76979967 + GC_rich Low_complexity Low_complexity 1 21 0 5 915 318 207 61 0 chr13 43304476 43304558 -76979754 - MLT1E2 LTR MaLR -184 443 357 5 915 533 266 101 8 chr13 43305354 43305483 -76978829 - RSINE1 SINE B4 -14 151 11 5 915 287 143 0 31 chr13 43306769 43306834 -76977478 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 5 915 584 220 178 43 chr13 43308243 43308428 -76975884 - ID_B1 SINE B4 -12 212 3 5 915 201 74 0 0 chr13 43308976 43309003 -76975309 + (CATG)n Simple_repeat Simple_repeat 3 29 0 5 915 421 308 146 0 chr13 43309003 43309122 -76975190 - RSINE1 SINE B4 -24 141 4 5 915 216 0 0 0 chr13 43309135 43309159 -76975153 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 915 724 206 8 0 chr13 43309179 43309305 -76975007 - B1_Mur3 SINE Alu -21 128 2 5 915 225 387 35 26 chr13 43309849 43309963 -76974349 + MER119 DNA MER1_type 50 164 -419 5 915 469 158 0 0 chr13 43311309 43311385 -76972927 + ID_B1 SINE B4 138 213 -11 5 915 237 303 91 122 chr13 43311516 43311779 -76972533 - ORR1E LTR MaLR -11 348 94 5 915 230 291 0 18 chr13 43311787 43311843 -76972469 + MLT1A1 LTR MaLR 354 408 0 5 915 247 159 15 60 chr13 43312327 43312394 -76971918 + C-rich Low_complexity Low_complexity 3 66 0 5 915 331 289 164 48 chr13 43312802 43312991 -76971321 - MIRb SINE MIR -8 260 50 5 915 503 297 116 41 chr13 43313698 43313965 -76970347 + MLT1D LTR MaLR 28 314 -191 5 915 223 174 0 0 chr13 43314519 43314565 -76969747 + T-rich Low_complexity Low_complexity 1 46 0 5 915 539 240 70 0 chr13 43314647 43314776 -76969536 - B1F SINE Alu -8 141 4 5 915 354 294 21 0 chr13 43314801 43314893 -76969419 - PB1D7 SINE Alu 0 127 27 5 915 189 0 0 0 chr13 43314903 43314924 -76969388 + (T)n Simple_repeat Simple_repeat 1 21 0 5 915 533 229 145 0 chr13 43315055 43315186 -76969126 - RSINE1 SINE B4 -13 152 3 5 915 476 262 21 96 chr13 43315187 43315392 -76968920 - B3A SINE B2 -8 208 9 5 915 974 267 39 4 chr13 43315390 43315623 -76968689 - B4A SINE B4 -51 241 1 5 915 188 298 168 74 chr13 43315736 43315939 -76968373 + MIRc SINE MIR 22 243 -25 5 915 346 293 65 95 chr13 43316029 43316064 -76968248 - B3A SINE B2 0 198 5 5 915 635 253 12 67 chr13 43316064 43316229 -76968083 - RSINE1 SINE B4 -4 161 6 5 915 764 283 33 114 chr13 43316390 43316483 -76967829 - B4 SINE B4 -11 281 214 5 915 423 0 0 0 chr13 43316483 43316530 -76967782 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 5 915 764 283 33 114 chr13 43316530 43316735 -76967577 - B4 SINE B4 -79 213 7 5 915 358 311 53 41 chr13 43316737 43316908 -76967404 + Tigger1 DNA MER2_type 2240 2412 -6 5 915 501 208 0 167 chr13 43317052 43317196 -76967116 - PB1D7 SINE Alu 0 120 1 5 915 1171 62 0 14 chr13 43317267 43317415 -76966897 - B1_Mus1 SINE Alu -1 147 2 5 915 1137 124 0 0 chr13 43317712 43318044 -76966268 + (CA)n Simple_repeat Simple_repeat 1 332 0 5 915 439 288 20 33 chr13 43318222 43318373 -76965939 + B1F1 SINE Alu 1 149 0 5 915 1250 54 0 0 chr13 43318378 43318525 -76965787 + B1_Mus1 SINE Alu 2 148 0 5 915 992 213 87 29 chr13 43318553 43318829 -76965483 + B4A SINE B4 1 292 0 5 915 191 114 29 0 chr13 43318879 43318914 -76965398 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 5 915 288 312 127 21 chr13 43318923 43319224 -76965088 + L1M5 LINE L1 5557 5886 -293 5 915 608 162 231 0 chr13 43319448 43319565 -76964747 + B1_Mur4 SINE Alu 1 144 -6 5 915 279 0 0 0 chr13 43319626 43319657 -76964655 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 915 242 345 17 17 chr13 43319667 43319847 -76964465 + (TATG)n Simple_repeat Simple_repeat 1 180 0 5 915 299 212 20 29 chr13 43319711 43319813 -76964499 + (TG)n Simple_repeat Simple_repeat 1 101 0 5 915 194 208 19 0 chr13 43319851 43319904 -76964408 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 5 915 763 292 54 23 chr13 43320028 43320287 -76964025 - B4A SINE B4 -22 270 4 5 915 404 226 123 7 chr13 43320288 43320426 -76963886 + L1M4 LINE L1 4862 5015 -1131 5 915 825 252 14 8 chr13 43320607 43320798 -76963514 + B3A SINE B2 1 186 -30 5 915 434 292 58 69 chr13 43322041 43322302 -76962010 + L1MB7 LINE L1 4450 4707 -1439 5 915 218 301 115 50 chr13 43322477 43322500 -76961812 - B3A SINE B2 0 198 136 5 915 499 302 13 32 chr13 43322500 43322534 -76961778 - RSINE1 SINE B4 -4 161 127 5 915 528 16 0 0 chr13 43322534 43322595 -76961717 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 915 499 302 13 32 chr13 43322595 43322714 -76961598 - RSINE1 SINE B4 -39 126 11 5 915 814 298 94 30 chr13 43322734 43323003 -76961309 + L1MB7 LINE L1 4856 5123 -1023 5 915 546 16 0 0 chr13 43323003 43323066 -76961246 + (GGAA)n Simple_repeat Simple_repeat 1 63 0 6 915 1296 307 61 37 chr13 43323066 43323987 -76960325 + L1MB7 LINE L1 5124 6082 -102 5 915 838 214 58 0 chr13 43324081 43324254 -76960058 - B3 SINE B2 0 216 34 6 915 284 304 80 6 chr13 43324255 43324417 -76959895 + MER33 DNA MER1_type 58 231 -93 6 915 413 198 68 23 chr13 43324690 43324778 -76959534 - B1F1 SINE Alu -47 102 11 6 915 321 303 34 0 chr13 43324699 43324788 -76959524 - ID_B1 SINE B4 -51 173 82 6 915 248 284 143 25 chr13 43326450 43326569 -76957743 + MLT1J LTR MaLR 23 155 -357 6 915 312 27 0 0 chr13 43329837 43329874 -76954438 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 915 21 0 0 0 chr13 43330912 43330933 -76953379 + GC_rich Low_complexity Low_complexity 1 21 0 6 915 681 189 13 77 chr13 43331242 43331397 -76952915 + B1_Mus2 SINE Alu 3 147 0 6 915 478 259 7 61 chr13 43331522 43331670 -76952642 - Tigger7 DNA MER2_type -9 2482 2343 6 915 594 279 13 39 chr13 43331667 43331820 -76952492 - Tigger7 DNA MER2_type -2274 217 69 6 915 342 0 0 0 chr13 43332345 43332383 -76951929 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 915 240 35 0 0 chr13 43332751 43332780 -76951532 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 915 369 150 17 0 chr13 43333319 43333379 -76950933 - ORR1D2 LTR MaLR -8 362 302 6 915 2098 141 83 23 chr13 43333982 43334366 -76949946 - MTB_Mm LTR MaLR 0 407 1 6 915 258 354 0 58 chr13 43334486 43334606 -76949706 + L2a LINE L2 3033 3145 -281 6 915 189 225 0 0 chr13 43334776 43334816 -76949496 + L2c LINE L2 3337 3376 -11 6 915 621 173 0 0 chr13 43335189 43335293 -76949019 + URR1B DNA MER1_type 122 225 0 6 915 337 314 41 48 chr13 43335495 43335642 -76948670 + L1M5 LINE L1 5625 5770 -354 6 915 280 267 24 79 chr13 43335924 43336050 -76948262 + RMER12 LTR ERVK 737 855 -467 6 915 260 244 7 36 chr13 43336050 43336190 -76948122 + (TATG)n Simple_repeat Simple_repeat 4 139 0 6 915 296 227 21 0 chr13 43336225 43336322 -76947990 + (TATG)n Simple_repeat Simple_repeat 4 102 0 6 915 491 281 38 23 chr13 43336353 43336484 -76947828 - ID_B1 SINE B4 -60 164 32 6 915 491 250 0 27 chr13 43336870 43337055 -76947257 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 915 558 216 128 0 chr13 43337296 43337421 -76946891 + B1_Mur1 SINE Alu 1 141 -8 6 915 213 132 0 0 chr13 43337426 43337464 -76946848 + (GA)n Simple_repeat Simple_repeat 2 39 0 6 915 514 224 69 0 chr13 43338374 43338490 -76945822 + ZP3AR Satellite Satellite 44 167 -45 6 915 300 111 0 0 chr13 43338550 43338595 -76945717 + (CAAA)n Simple_repeat Simple_repeat 3 47 0 6 915 202 333 97 10 chr13 43339108 43339211 -76945101 - MIR SINE MIR -126 136 25 6 915 396 0 0 0 chr13 43340056 43340100 -76944212 + (TC)n Simple_repeat Simple_repeat 2 45 0 6 915 306 0 0 0 chr13 43340100 43340133 -76944179 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 915 657 270 74 15 chr13 43340935 43341138 -76943174 + B3 SINE B2 2 216 0 6 915 1855 221 52 20 chr13 43341564 43341966 -76942346 + MTD LTR MaLR 1 415 -4 6 915 282 163 0 0 chr13 43342042 43342091 -76942221 - ID4_ SINE ID -34 49 1 6 915 1026 225 57 23 chr13 43342730 43342994 -76941318 - B4 SINE B4 -18 274 2 6 915 260 197 60 15 chr13 43343405 43343472 -76940840 - ID4 SINE ID -13 70 1 6 915 483 33 0 0 chr13 43343591 43343652 -76940660 + (TCTCTG)n Simple_repeat Simple_repeat 4 64 0 6 915 892 160 200 16 chr13 43344325 43344515 -76939797 - URR1B DNA MER1_type 0 225 1 6 915 420 300 46 39 chr13 43344574 43344834 -76939478 + Lx9 LINE L1 5787 6048 -1596 6 915 610 248 16 0 chr13 43344948 43345077 -76939235 - B1_Mur1 SINE Alu -17 132 2 6 915 343 299 68 38 chr13 43345095 43345227 -76939085 - B1_Mur1 SINE Alu -13 136 1 6 915 627 242 112 31 chr13 43347244 43347440 -76936872 + ID_B1 SINE B4 2 213 -11 6 915 800 190 0 7 chr13 43347581 43347719 -76936593 - B1_Mus1 SINE Alu -5 143 7 6 915 1528 164 8 23 chr13 43348005 43348301 -76936011 - ORR1D1 LTR MaLR -84 286 1 6 915 246 314 65 56 chr13 43349061 43349169 -76935143 + Charlie5 DNA MER1_type 8 116 -2508 6 915 600 244 133 15 chr13 43349300 43349496 -76934816 - ID_B1 SINE B4 -3 221 3 6 915 278 284 0 0 chr13 43349533 43349607 -76934705 - ID4_ SINE ID -9 74 1 6 915 426 227 23 0 chr13 43349695 43349783 -76934529 + B4 SINE B4 2 91 -201 6 915 213 329 11 66 chr13 43349884 43349975 -76934337 + RSINE1 SINE B4 78 163 -2 6 915 276 215 20 0 chr13 43351130 43351187 -76933125 + ID4 SINE ID 31 88 -64 6 915 285 98 0 0 chr13 43351671 43351712 -76932600 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 915 522 263 44 163 chr13 43351953 43352139 -76932173 + L1MA7 LINE L1 5612 5801 -490 6 915 665 247 0 33 chr13 43352139 43352155 -76932157 - B1_Mur2 SINE Alu -2 147 135 6 915 198 0 0 0 chr13 43352155 43352177 -76932135 + (ATTG)n Simple_repeat Simple_repeat 3 24 0 6 915 665 247 0 33 chr13 43352177 43352311 -76932001 - B1_Mur2 SINE Alu -15 134 2 6 915 522 263 44 163 chr13 43352311 43352340 -76931972 + L1MA7 LINE L1 5802 5823 -468 6 915 702 277 57 17 chr13 43352340 43352516 -76931796 + B3A SINE B2 1 183 -15 6 915 522 263 44 163 chr13 43352516 43352803 -76931509 + L1MA7 LINE L1 5824 6054 -237 6 915 333 118 0 0 chr13 43352854 43352905 -76931407 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 915 728 145 29 10 chr13 43352894 43353110 -76931202 + (TA)n Simple_repeat Simple_repeat 1 220 0 6 915 285 167 0 0 chr13 43353137 43353191 -76931121 + (TATG)n Simple_repeat Simple_repeat 2 55 0 6 915 373 277 21 11 chr13 43354097 43354192 -76930120 + ID_B1 SINE B4 124 219 -5 6 915 335 127 16 0 chr13 43354192 43354255 -76930057 + (GGA)n Simple_repeat Simple_repeat 1 64 0 6 915 739 204 15 15 chr13 43354543 43354677 -76929635 + B1_Mur1 SINE Alu 2 135 -14 6 915 251 192 14 0 chr13 43354684 43354757 -76929555 + (TAAA)n Simple_repeat Simple_repeat 1 74 0 6 915 255 61 0 0 chr13 43355070 43355103 -76929209 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 6 915 1269 109 22 5 chr13 43355107 43355292 -76929020 - B2_Mm2 SINE B2 -6 189 2 6 915 1218 274 10 27 chr13 43355357 43355653 -76928659 - B4 SINE B4 0 292 2 6 915 390 343 58 60 chr13 43355814 43356125 -76928187 - ORR1E LTR MaLR -60 310 23 6 915 232 271 22 56 chr13 43356485 43356575 -76927737 - MLT2B5 LTR ERVL -251 350 264 6 915 357 321 28 9 chr13 43356538 43356645 -76927667 - MLT1C LTR MaLR -70 397 289 6 915 296 287 45 11 chr13 43356650 43356738 -76927574 - BC1_Mm scRNA scRNA -56 96 6 6 915 317 299 49 0 chr13 43357006 43357150 -76927162 - L1MA5 LINE L1 -355 5945 5795 6 915 327 85 0 0 chr13 43357335 43357382 -76926930 + (GGA)n Simple_repeat Simple_repeat 2 48 0 6 915 1031 241 58 18 chr13 43357402 43357626 -76926686 + Tigger7 DNA MER2_type 11 243 -2248 6 915 258 304 16 97 chr13 43358173 43358297 -76926015 - Tigger5 DNA MER2_type -1 2405 2292 6 915 511 323 35 50 chr13 43358326 43358528 -76925784 - Tigger5 DNA MER2_type -2207 199 1 6 915 243 61 0 0 chr13 43358864 43358897 -76925415 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 915 463 229 38 9 chr13 43359014 43359120 -76925192 - ID_B1 SINE B4 -115 109 1 6 915 486 315 213 13 chr13 43359847 43360082 -76924230 - B4A SINE B4 -8 284 3 6 915 225 321 43 78 chr13 43360706 43360821 -76923491 + MIRm SINE MIR 165 275 -1 6 915 355 283 10 39 chr13 43361045 43361148 -76923164 + PB1D10 SINE Alu 3 102 -15 6 915 1020 111 181 16 chr13 43361150 43361343 -76922969 + URR1B DNA MER1_type 1 225 0 6 915 255 125 0 0 chr13 43361367 43361407 -76922905 + (CAG)n Simple_repeat Simple_repeat 2 41 0 6 915 180 0 0 0 chr13 43361473 43361493 -76922819 + (CATG)n Simple_repeat Simple_repeat 1 20 0 6 915 629 303 27 19 chr13 43361736 43362075 -76922237 + L1_Mur3 LINE L1 5394 5776 -524 6 915 907 170 7 7 chr13 43362099 43362247 -76922065 + B1_Mur1 SINE Alu 2 149 0 6 915 1210 55 7 0 chr13 43362287 43362433 -76921879 + B1_Mm SINE Alu 1 147 0 6 915 485 262 0 27 chr13 43362822 43362932 -76921380 + PB1D10 SINE Alu 3 109 -8 6 915 271 274 32 0 chr13 43362949 43363011 -76921301 + ID4_ SINE ID 2 65 -18 6 915 905 119 17 17 chr13 43363068 43363247 -76921065 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 6 915 306 148 0 0 chr13 43363258 43363312 -76921000 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 6 915 342 45 0 0 chr13 43363865 43363909 -76920403 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 915 677 286 56 9 chr13 43364571 43364786 -76919526 - MER21B LTR ERV1 -74 789 565 6 915 252 0 0 0 chr13 43364905 43364933 -76919379 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 6 915 234 343 18 37 chr13 43364948 43365057 -76919255 + PB1D10 SINE Alu 3 109 -8 6 915 1091 294 73 91 chr13 43365096 43365658 -76918654 - MER21B LTR ERV1 -296 567 16 6 915 265 296 113 0 chr13 43365934 43366005 -76918307 + ID4 SINE ID 2 80 -3 6 915 794 141 98 38 chr13 43366020 43366153 -76918159 + B1_Mus2 SINE Alu 1 141 -6 6 915 216 143 0 0 chr13 43366154 43366196 -76918116 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 915 216 67 0 0 chr13 43366283 43366313 -76917999 + (GGGAGA)n Simple_repeat Simple_repeat 4 33 0 6 915 195 42 0 0 chr13 43366314 43366338 -76917974 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 6 915 189 296 35 58 chr13 43368001 43368087 -76916225 - L2a LINE L2 -262 3164 3081 6 915 900 199 375 16 chr13 43368096 43368403 -76915909 - MTD LTR MaLR 0 419 3 6 915 281 247 21 86 chr13 43368455 43368548 -76915764 - LTR48 LTR ERV1 -19 768 682 6 915 238 192 37 37 chr13 43368575 43368629 -76915683 - LTR48 LTR ERV1 -150 494 441 6 915 524 229 130 72 chr13 43369075 43369167 -76915145 + ID_B1 SINE B4 1 109 -115 6 915 306 0 0 0 chr13 43369167 43369201 -76915111 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 915 524 229 130 72 chr13 43369201 43369315 -76914997 + ID_B1 SINE B4 110 219 -5 6 915 216 135 0 0 chr13 43370577 43370614 -76913698 + (CACG)n Simple_repeat Simple_repeat 3 39 0 6 915 407 255 146 57 chr13 43370625 43370837 -76913475 + MLT2D LTR ERVL 1 231 -183 7 915 513 302 80 28 chr13 43370863 43370880 -76913432 - CYRA11_Mm Unknown Y-chromosome -215 402 317 7 915 1169 144 114 0 chr13 43370880 43371081 -76913231 + URR1A DNA MER1_type 3 226 0 7 915 513 302 80 28 chr13 43371081 43371112 -76913200 - CYRA11_Mm Unknown Y-chromosome -215 316 141 7 915 367 284 0 19 chr13 43371319 43371353 -76912959 + (CATG)n Simple_repeat Simple_repeat 2 34 0 7 915 3422 54 0 19 chr13 43371353 43371768 -76912544 + MTB_Mm LTR MaLR 1 407 0 7 915 367 284 0 19 chr13 43371768 43371837 -76912475 + (CATG)n Simple_repeat Simple_repeat 1 69 0 7 915 301 267 13 13 chr13 43371837 43371913 -76912399 - ID4_ SINE ID -6 77 2 7 915 317 301 159 14 chr13 43371983 43372121 -76912191 + MER5A1 DNA MER1_type 1 158 -8 7 915 219 36 0 0 chr13 43372173 43372201 -76912111 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 7 915 243 247 91 0 chr13 43372232 43372309 -76912003 - MER5B DNA MER1_type -92 86 3 7 915 332 311 0 17 chr13 43372623 43372803 -76911509 + (CA)n Simple_repeat Simple_repeat 1 177 0 7 915 2298 86 53 20 chr13 43372911 43373266 -76911046 + IAPLTR1_Mm LTR ERVK 1 367 0 7 915 53656 23 17 6 chr13 43373266 43379666 -76904646 + IAPEz-int LTR ERVK 8 6478 -3 7 915 2298 86 53 20 chr13 43379670 43380025 -76904287 + IAPLTR1_Mm LTR ERVK 1 367 0 7 915 224 286 0 18 chr13 43380810 43380867 -76903445 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 915 459 329 59 53 chr13 43381371 43381708 -76902604 - Lx8 LINE L1 0 7473 7135 7 915 366 252 108 36 chr13 43381747 43381858 -76902454 - ID_B1 SINE B4 0 224 106 7 915 236 269 186 40 chr13 43381858 43381871 -76902441 - B1F2 SINE Alu -1 148 7 7 915 1497 189 142 3 chr13 43382456 43382786 -76901526 - MTD LTR MaLR 0 419 44 7 915 234 91 0 0 chr13 43383192 43383225 -76901087 + (T)n Simple_repeat Simple_repeat 1 33 0 7 915 187 348 11 43 chr13 43383498 43383591 -76900721 + MIR SINE MIR 40 129 -79 7 915 198 91 0 0 chr13 43383860 43383893 -76900419 + (TCC)n Simple_repeat Simple_repeat 3 35 0 7 915 643 214 7 48 chr13 43384275 43384422 -76899890 + B3A SINE B2 57 197 -1 7 916 252 143 0 0 chr13 43385164 43385206 -76899106 + (TCC)n Simple_repeat Simple_repeat 2 43 0 7 916 597 94 0 0 chr13 43385229 43385314 -76898998 + (CA)n Simple_repeat Simple_repeat 1 85 0 7 916 581 202 146 8 chr13 43385648 43385778 -76898534 + B1_Mur4 SINE Alu 3 150 0 7 916 1009 253 89 4 chr13 43385822 43386080 -76898232 + B4 SINE B4 2 281 -11 7 916 247 292 141 33 chr13 43386426 43386518 -76897794 - MLT1A1 LTR MaLR -306 102 1 7 916 396 272 22 7 chr13 43386891 43387028 -76897284 - L1MA5 LINE L1 -50 6250 6112 7 916 292 89 0 0 chr13 43387028 43387073 -76897239 + B1_Mur4 SINE Alu 106 150 0 7 916 201 147 0 0 chr13 43387073 43387107 -76897205 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 7 916 703 253 61 20 chr13 43387311 43387509 -76896803 - B3 SINE B2 -10 206 1 7 916 297 0 0 0 chr13 43387519 43387552 -76896760 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 7 916 224 253 156 26 chr13 43387552 43387579 -76896733 - PB1D9 SINE Alu -12 108 83 7 916 1313 159 9 22 chr13 43387579 43387804 -76896508 + URR1B DNA MER1_type 4 225 0 7 916 224 253 156 26 chr13 43387804 43387853 -76896459 - PB1D9 SINE Alu -38 82 22 7 916 898 206 53 19 chr13 43388036 43388244 -76896068 + B3 SINE B2 2 216 0 7 916 247 333 27 75 chr13 43388691 43388726 -76895586 + RMER12 LTR ERVK 739 771 -551 7 916 258 32 0 0 chr13 43388726 43388757 -76895555 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 916 247 333 27 75 chr13 43388757 43388867 -76895445 + RMER12 LTR ERVK 772 877 -445 7 916 1116 176 24 0 chr13 43388982 43389187 -76895125 + B3 SINE B2 1 210 -6 7 916 974 228 15 15 chr13 43390165 43390365 -76893947 + ID_B1 SINE B4 22 221 -3 7 916 507 238 28 37 chr13 43390402 43390511 -76893801 + PB1D7 SINE Alu 3 110 -10 7 916 191 274 20 0 chr13 43390676 43390727 -76893585 - MIRc SINE MIR -103 165 114 7 916 265 296 175 56 chr13 43390744 43390887 -76893425 + RSINE1 SINE B4 4 163 -2 7 916 554 244 36 29 chr13 43390902 43391041 -76893271 + RSINE1 SINE B4 3 142 -23 7 916 26 30 0 0 chr13 43391041 43391074 -76893238 + AT_rich Low_complexity Low_complexity 1 33 0 7 916 267 271 0 0 chr13 43392149 43392208 -76892104 + MER5A DNA MER1_type 122 180 -9 7 916 557 12 36 12 chr13 43392631 43392714 -76891598 + (GA)n Simple_repeat Simple_repeat 2 86 0 7 916 432 283 96 28 chr13 43393309 43393527 -76890785 + L1MC LINE L1 5576 5808 -2074 7 916 924 339 61 6 chr13 43393637 43393964 -76890348 - MER2 DNA MER2_type 0 345 1 7 916 22 0 0 0 chr13 43393988 43394010 -76890302 + AT_rich Low_complexity Low_complexity 1 22 0 7 916 587 176 59 105 chr13 43394144 43394235 -76890077 + B1_Mus1 SINE Alu 1 94 -54 7 916 1359 80 36 26 chr13 43394235 43394428 -76889884 - B2_Mm2 SINE B2 0 195 1 7 916 587 176 59 105 chr13 43394428 43394488 -76889824 + B1_Mus1 SINE Alu 95 145 -3 7 916 252 0 0 0 chr13 43394901 43394929 -76889383 + (GA)n Simple_repeat Simple_repeat 2 29 0 7 916 494 212 0 39 chr13 43394934 43395037 -76889275 - RSINE1 SINE B4 -61 104 6 7 916 405 0 0 0 chr13 43395315 43395360 -76888952 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 916 207 378 45 28 chr13 43395433 43395610 -76888702 + MIRb SINE MIR 84 263 -5 7 916 241 333 0 0 chr13 43396798 43396879 -76887433 - ID4_ SINE ID -1 82 2 7 916 848 235 73 0 chr13 43396991 43397195 -76887117 + ID_B1 SINE B4 3 221 -3 7 916 313 250 98 7 chr13 43400015 43400156 -76884156 - MIRb SINE MIR -91 177 12 7 916 297 0 0 0 chr13 43400826 43400859 -76883453 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 916 287 235 184 0 chr13 43401120 43401218 -76883094 + MIR SINE MIR 36 151 -111 7 916 606 308 5 67 chr13 43401442 43401651 -76882661 - B3A SINE B2 0 198 3 7 916 234 61 20 39 chr13 43401653 43401704 -76882608 + (TTTG)n Simple_repeat Simple_repeat 1 50 0 7 916 544 244 15 23 chr13 43401709 43401839 -76882473 - ID_B1 SINE B4 0 224 96 7 916 382 319 128 64 chr13 43401994 43402337 -76881975 + L2a LINE L2 2731 3094 -332 7 916 348 24 0 0 chr13 43402337 43402378 -76881934 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 7 916 245 353 67 64 chr13 43402378 43402501 -76881811 + L2a LINE L2 3095 3222 -204 7 916 246 254 32 0 chr13 43402605 43402668 -76881644 + MLT1A LTR MaLR 79 143 -231 7 916 228 244 53 85 chr13 43402770 43402864 -76881448 + MTEb LTR MaLR 278 368 -11 7 916 549 321 0 71 chr13 43403655 43403821 -76880491 + B3A SINE B2 1 155 -43 7 916 501 127 0 0 chr13 43403821 43403900 -76880412 + (CA)n Simple_repeat Simple_repeat 2 80 0 7 916 549 321 0 71 chr13 43403900 43403944 -76880368 + B3A SINE B2 156 196 -2 7 916 285 282 94 51 chr13 43403993 43404131 -76880181 + ORR1E LTR MaLR 1 144 -221 7 916 383 213 13 0 chr13 43404139 43404214 -76880098 + MTB_Mm LTR MaLR 3 78 -329 7 916 307 273 138 57 chr13 43404236 43404446 -76879866 + L1MCa LINE L1 1757 1983 -4525 7 916 296 359 75 28 chr13 43404499 43404605 -76879707 + PB1D7 SINE Alu 2 112 -8 7 916 662 250 96 66 chr13 43405159 43405356 -76878956 + ID_B1 SINE B4 1 203 -21 7 916 469 179 16 0 chr13 43405356 43405479 -76878833 + (CA)n Simple_repeat Simple_repeat 2 126 0 7 916 187 338 84 52 chr13 43405850 43406093 -76878219 + L2b LINE L2 2881 3125 -250 7 916 450 0 0 0 chr13 43406097 43406147 -76878165 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 916 709 269 71 6 chr13 43406163 43406346 -76877966 + ORR1E LTR MaLR 3 197 -162 7 916 468 187 0 0 chr13 43406346 43406469 -76877843 + (CTTG)n Simple_repeat Simple_repeat 1 123 0 7 916 1404 177 67 131 chr13 43407205 43407512 -76876800 + ORR1B2 LTR MaLR 1 298 -69 7 916 225 0 0 0 chr13 43407512 43407537 -76876775 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 7 916 1404 177 67 131 chr13 43407537 43407558 -76876754 + ORR1B2 LTR MaLR 299 312 -55 7 916 785 184 21 7 chr13 43407558 43407700 -76876612 + B1_Mus1 SINE Alu 3 146 -2 7 916 1404 177 67 131 chr13 43407700 43407760 -76876552 + ORR1B2 LTR MaLR 313 365 -2 7 916 251 200 127 0 chr13 43408463 43408518 -76875794 + ORR1E LTR MaLR 204 265 -114 7 916 676 224 0 8 chr13 43408767 43408893 -76875419 - RSINE1 SINE B4 -38 127 3 7 916 267 31 0 0 chr13 43408920 43408952 -76875360 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 916 421 204 102 2 chr13 43409118 43409243 -76875069 - L1MA4 LINE L1 -347 5953 5817 7 916 368 68 0 33 chr13 43409243 43409304 -76875008 + (TGAA)n Simple_repeat Simple_repeat 4 62 0 7 916 564 215 27 75 chr13 43409304 43409450 -76874862 + RSINE1 SINE B4 27 165 0 7 916 392 236 123 39 chr13 43409954 43410108 -76874204 - Tigger7 DNA MER2_type -47 2444 2278 7 916 950 162 0 7 chr13 43410127 43410276 -76874036 + B1_Mur3 SINE Alu 1 148 -1 7 916 407 294 10 0 chr13 43410306 43410408 -76873904 - Tigger7 DNA MER2_type -2379 112 10 7 916 477 163 40 17 chr13 43410707 43410882 -76873430 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 7 916 491 205 84 17 chr13 43410896 43411015 -76873297 - B1_Mur1 SINE Alu -12 137 11 7 916 404 264 0 28 chr13 43411227 43411336 -76872976 + PB1D10 SINE Alu 3 108 -9 7 916 237 163 0 0 chr13 43411344 43411393 -76872919 + GA-rich Low_complexity Low_complexity 2 50 0 7 916 774 245 30 25 chr13 43411425 43411622 -76872690 + B3A SINE B2 1 198 0 7 916 192 227 100 57 chr13 43412485 43412555 -76871757 - L3 LINE CR1 -3453 1036 964 7 916 250 304 14 0 chr13 43412857 43412926 -76871386 - ID4_ SINE ID -11 72 3 7 916 819 346 81 47 chr13 43412959 43413429 -76870883 + L1M5 LINE L1 2725 3221 -2925 7 916 447 322 46 7 chr13 43413429 43413582 -76870730 + RSINE1 SINE B4 2 160 -5 7 916 819 346 81 47 chr13 43413582 43413878 -76870434 + L1M5 LINE L1 3222 3517 -2629 7 916 557 223 9 9 chr13 43413900 43414013 -76870299 - B1_Mus1 SINE Alu -11 137 25 7 916 379 299 36 21 chr13 43413981 43414101 -76870211 + B3 SINE B2 75 197 -19 7 916 1393 71 38 5 chr13 43414101 43414285 -76870027 + B2_Mm2 SINE B2 1 190 -5 7 916 379 299 36 21 chr13 43414285 43414304 -76870008 + B3 SINE B2 198 216 0 7 916 21 57 0 0 chr13 43414737 43414772 -76869540 + AT_rich Low_complexity Low_complexity 1 35 0 8 916 743 255 102 46 chr13 43414852 43415136 -76869176 + MLT1F1 LTR MaLR 4 303 -266 8 916 399 340 292 7 chr13 43415181 43415466 -76868846 - MLT1A LTR MaLR 0 408 42 8 916 307 315 36 36 chr13 43415558 43415670 -76868642 + MLT1E1A LTR MaLR 567 678 -2 8 916 1535 229 109 43 chr13 43415673 43416203 -76868109 - RMER2 LTR ERV1 -2 565 1 8 916 3205 128 155 32 chr13 43416299 43416912 -76867400 + RMER6C LTR ERVK 1 688 -2 8 916 901 150 75 43 chr13 43416913 43417101 -76867211 + B2_Mm2 SINE B2 2 195 0 8 916 374 321 41 101 chr13 43417115 43417401 -76866911 - ORR1E LTR MaLR 0 419 93 8 916 589 133 51 0 chr13 43417652 43417750 -76866562 - ORR1B2 LTR MaLR 0 367 265 8 916 261 287 119 0 chr13 43417984 43418085 -76866227 - PB1D10 SINE Alu 0 117 5 8 916 563 273 21 7 chr13 43418115 43418259 -76866053 - B1F SINE Alu -3 146 1 8 916 1020 217 39 0 chr13 43418286 43418489 -76865823 - ID_B1 SINE B4 0 224 14 8 916 751 263 20 40 chr13 43418618 43418820 -76865492 - B3A SINE B2 0 198 1 8 916 4995 170 80 5 chr13 43418873 43419766 -76864546 - RMER1A Other Other -5 1025 66 8 916 3694 198 109 14 chr13 43419833 43420621 -76863691 + Lx5 LINE L1 6185 7047 -3 8 916 233 246 82 55 chr13 43420660 43420733 -76863579 + PB1D9 SINE Alu 46 120 0 8 916 1203 97 6 18 chr13 43421481 43421643 -76862669 + B2_Mm1t SINE B2 1 161 -32 8 916 306 0 0 0 chr13 43421643 43421677 -76862635 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 8 916 893 259 50 0 chr13 43421967 43422168 -76862144 + B4A SINE B4 2 212 -80 8 916 2432 192 22 24 chr13 43422168 43422669 -76861643 - RLTR16 LTR ERVK 0 505 6 8 916 363 282 12 12 chr13 43422672 43422758 -76861554 + B4A SINE B4 206 291 -1 8 916 222 118 0 0 chr13 43422785 43422819 -76861493 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 916 1866 154 11 34 chr13 43423156 43423505 -76860807 - RLTR15 LTR ERVK -18 341 1 8 916 530 109 11 0 chr13 43423925 43424017 -76860295 + (TG)n Simple_repeat Simple_repeat 2 94 0 8 916 301 177 35 92 chr13 43424083 43424170 -76860142 - B4 SINE B4 -208 84 3 8 916 483 314 30 69 chr13 43424723 43424925 -76859387 - B3A SINE B2 -4 194 1 8 916 770 224 98 35 chr13 43424955 43425158 -76859154 + B3 SINE B2 1 216 0 8 916 590 269 80 0 chr13 43425169 43425344 -76858968 - MER2 DNA MER2_type -83 262 74 8 916 366 298 154 14 chr13 43425451 43425594 -76858718 - MER2B DNA MER2_type -173 163 1 8 916 968 198 9 98 chr13 43425774 43425998 -76858314 + B3 SINE B2 1 204 -12 8 916 213 39 0 0 chr13 43425998 43426024 -76858288 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 916 2551 118 25 76 chr13 43426233 43426682 -76857630 + RLTR23 LTR ERV1 1 426 -4 8 916 228 180 0 0 chr13 43426795 43426840 -76857472 + T-rich Low_complexity Low_complexity 17 61 0 8 916 1103 76 21 0 chr13 43426840 43426985 -76857327 - B1_Mus1 SINE Alu 0 148 1 8 916 228 180 0 0 chr13 43426985 43427000 -76857312 + T-rich Low_complexity Low_complexity 2 16 0 8 916 435 316 51 29 chr13 43427035 43427172 -76857140 + ID_B1 SINE B4 5 144 -80 8 916 335 356 61 38 chr13 43427173 43427436 -76856876 - L1M5 LINE L1 -414 5826 5558 8 916 269 327 64 110 chr13 43427437 43427719 -76856593 - MER121 Unknown Unknown -93 319 51 8 916 237 98 0 0 chr13 43427901 43427942 -76856370 + (G)n Simple_repeat Simple_repeat 1 41 0 8 916 1370 77 16 27 chr13 43428256 43428442 -76855870 - B2_Mm2 SINE B2 -10 185 2 8 916 794 94 163 16 chr13 43428453 43428582 -76855730 - B1_Mur4 SINE Alu 0 150 3 8 916 797 185 7 7 chr13 43428675 43428811 -76855501 + B1_Mur2 SINE Alu 2 137 -12 8 916 609 102 0 0 chr13 43428813 43428921 -76855391 + (TC)n Simple_repeat Simple_repeat 1 108 0 8 916 300 282 60 0 chr13 43428994 43429111 -76855201 + L1ME3B LINE L1 5769 5892 -348 8 916 383 342 7 40 chr13 43429361 43429513 -76854799 + B1F2 SINE Alu 1 147 -2 8 916 666 162 19 0 chr13 43429607 43429712 -76854600 - B3A SINE B2 -90 108 2 8 916 2788 129 11 18 chr13 43430011 43430460 -76853852 - ORR1A2-int LTR MaLR -1517 446 1 8 916 2419 92 6 0 chr13 43430460 43430785 -76853527 - ORR1A2 LTR MaLR 0 327 1 8 916 738 260 5 67 chr13 43430789 43430983 -76853329 + B3A SINE B2 1 182 -16 8 916 1308 39 0 0 chr13 43431009 43431162 -76853150 + B2_Mm2 SINE B2 2 154 -41 8 916 669 193 0 17 chr13 43431155 43431271 -76853041 + B1_Mm SINE Alu 34 147 0 8 916 206 211 0 34 chr13 43431271 43431330 -76852982 + A-rich Low_complexity Low_complexity 2 58 0 8 916 301 279 97 57 chr13 43432542 43432717 -76851595 - MIRb SINE MIR 0 268 87 8 916 324 303 10 10 chr13 43432851 43432951 -76851361 + ID_B1 SINE B4 82 181 -43 8 916 719 258 116 55 chr13 43433019 43433294 -76851018 + B4 SINE B4 1 292 0 8 916 378 313 70 38 chr13 43433440 43433626 -76850686 - LTR33 LTR ERVL -9 506 315 8 916 249 310 62 0 chr13 43433838 43433951 -76850361 - ORR1E LTR MaLR -239 120 1 8 916 237 339 64 0 chr13 43434497 43434606 -76849706 - Tigger5 DNA MER2_type 0 2406 2291 8 916 459 285 46 17 chr13 43434726 43434852 -76849460 + L1MA9 LINE L1 5650 5778 -534 8 916 360 0 0 0 chr13 43434852 43434892 -76849420 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 916 459 285 46 17 chr13 43434892 43434940 -76849372 + L1MA9 LINE L1 5779 5829 -483 8 916 1444 58 37 0 chr13 43434940 43435128 -76849184 + B2_Mm2 SINE B2 1 195 0 8 916 775 178 0 0 chr13 43435198 43435316 -76848996 + B1_Mur2 SINE Alu 2 119 -30 8 916 405 0 0 0 chr13 43435316 43435361 -76848951 + (GA)n Simple_repeat Simple_repeat 2 46 0 8 916 417 228 108 108 chr13 43435430 43435482 -76848830 + L1MA9 LINE L1 6101 6153 -159 8 916 297 0 0 0 chr13 43435482 43435515 -76848797 + (TC)n Simple_repeat Simple_repeat 1 33 0 8 916 288 0 0 0 chr13 43435515 43435546 -76848766 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 916 417 228 108 108 chr13 43435546 43435704 -76848608 + L1MA9 LINE L1 6154 6311 -1 8 916 290 329 26 0 chr13 43436146 43436222 -76848090 + RSINE1 SINE B4 88 165 0 8 916 207 0 0 0 chr13 43436455 43436478 -76847834 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 8 916 2203 122 31 34 chr13 43436540 43436897 -76847415 - ORR1B2 LTR MaLR -8 359 4 8 916 341 215 15 0 chr13 43437253 43437318 -76846994 + B3A SINE B2 104 169 -29 8 916 216 0 0 0 chr13 43437320 43437344 -76846968 + (CA)n Simple_repeat Simple_repeat 2 25 0 8 916 2971 168 13 84 chr13 43437459 43438069 -76846243 - RLTR12A LTR ERVK -1 567 1 8 916 989 156 6 23 chr13 43438550 43438569 -76845743 - B2_Mm1t SINE B2 -19 174 156 8 916 234 0 0 0 chr13 43438569 43438595 -76845717 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 8 916 1131 78 0 13 chr13 43438595 43438752 -76845560 - B2_Mm2 SINE B2 -38 155 1 8 916 194 294 0 0 chr13 43439056 43439107 -76845205 - MER5A DNA MER1_type -27 162 112 8 916 345 310 86 52 chr13 43439653 43439898 -76844414 - MER57C2 LTR ERV1 0 434 155 8 916 236 216 41 0 chr13 43440032 43440129 -76844183 + G-rich Low_complexity Low_complexity 3 103 0 8 916 470 308 123 17 chr13 43440129 43440372 -76843940 + ORR1E LTR MaLR 1 251 -119 8 916 2713 146 7 5 chr13 43440821 43441241 -76843071 + MTC LTR MaLR 1 421 0 8 916 219 365 10 30 chr13 43441296 43441395 -76842917 - MIRb SINE MIR -86 182 86 8 916 238 324 55 64 chr13 43441412 43441521 -76842791 + ID_B1 SINE B4 51 158 -66 8 916 278 253 122 71 chr13 43441448 43441546 -76842766 + PB1D10 SINE Alu 10 112 -5 8 916 366 188 29 0 chr13 43441558 43441627 -76842685 + ID4_ SINE ID 2 72 -11 8 916 180 0 0 0 chr13 43441669 43441689 -76842623 + (TG)n Simple_repeat Simple_repeat 2 21 0 8 916 936 168 15 44 chr13 43442032 43442238 -76842074 + B3 SINE B2 16 215 -1 8 916 2322 79 0 57 chr13 43442469 43442805 -76841507 + L1_Mus2 LINE L1 6250 6566 0 8 916 750 204 0 14 chr13 43443213 43443352 -76840960 - B1_Mus2 SINE Alu -10 137 1 8 916 218 231 188 25 chr13 43443963 43443991 -76840321 - PB1D10 SINE Alu -1 116 24 8 916 236 180 39 39 chr13 43443991 43444043 -76840269 - ID_B1 SINE B4 -68 156 105 8 916 297 116 362 0 chr13 43444014 43444083 -76840229 - B4A SINE B4 -155 137 44 8 916 496 240 0 0 chr13 43444097 43444193 -76840119 + RSINE1 SINE B4 70 165 0 8 916 348 322 37 43 chr13 43444241 43444403 -76839909 - L1M4 LINE L1 -1090 5056 4896 8 916 5303 137 58 16 chr13 43444404 43445270 -76839042 + RMER19B LTR ERVK 1 902 0 8 916 341 214 99 16 chr13 43445306 43445425 -76838887 - L1M4 LINE L1 -1271 4875 4748 8 916 426 214 140 33 chr13 43445643 43445793 -76838519 + MER20 DNA MER1_type 21 186 -33 8 916 253 245 0 0 chr13 43447250 43447299 -76837013 - ORR1E LTR MaLR -4 375 327 8 916 320 116 324 9 chr13 43447296 43447407 -76836905 - B2_Mm2 SINE B2 -3 192 47 8 916 1175 119 11 0 chr13 43447448 43447624 -76836688 - B2_Mm1t SINE B2 -14 179 2 8 916 614 253 97 58 chr13 43447752 43447947 -76836365 - ORR1E LTR MaLR -138 221 18 8 916 2512 86 3 0 chr13 43447947 43448273 -76836039 + ORR1A2 LTR MaLR 1 327 0 8 916 228 67 0 0 chr13 43448545 43448575 -76835737 + (A)n Simple_repeat Simple_repeat 1 30 0 8 916 318 340 12 135 chr13 43448723 43448893 -76835419 + L3b LINE CR1 177 325 -157 8 916 949 137 7 0 chr13 43449277 43449423 -76834889 - B1_Mus1 SINE Alu 0 148 2 8 916 333 0 0 0 chr13 43449493 43449530 -76834782 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 916 349 285 177 0 chr13 43449560 43449690 -76834622 + RSINE1 SINE B4 4 156 -9 8 916 812 284 49 33 chr13 43449723 43450029 -76834283 - RMER5 LTR ERV1 -191 343 33 9 916 200 35 35 0 chr13 43450047 43450076 -76834236 + (CCCCCA)n Simple_repeat Simple_repeat 5 34 0 9 916 1458 190 60 46 chr13 43450574 43450921 -76833391 - ORR1C2 LTR MaLR 0 384 33 9 916 357 24 0 0 chr13 43450935 43450977 -76833335 + (CTG)n Simple_repeat Simple_repeat 1 42 0 9 916 276 125 0 0 chr13 43450980 43451020 -76833292 + ORR1C2 LTR MaLR 345 384 0 9 916 3405 42 0 2 chr13 43451177 43451578 -76832734 - MTB LTR MaLR 0 400 1 9 916 543 305 93 17 chr13 43451580 43451817 -76832495 + RMER20B LTR ERVK 131 385 -242 9 916 405 0 0 0 chr13 43452095 43452140 -76832172 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 916 208 173 19 0 chr13 43452962 43453014 -76831298 + (TTG)n Simple_repeat Simple_repeat 2 54 0 9 916 403 142 11 87 chr13 43453020 43453124 -76831188 - B1_Mur4 SINE Alu -2 148 54 9 916 3428 63 21 17 chr13 43453129 43453149 -76831163 - Lx3_Mus LINE L1 -5 7004 6989 9 916 195 42 0 0 chr13 43453149 43453173 -76831139 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 9 916 3428 63 21 17 chr13 43453173 43453617 -76830695 - Lx3_Mus LINE L1 -21 6988 6538 9 916 442 248 112 8 chr13 43453620 43453700 -76830612 - B1F SINE Alu 0 149 70 9 916 210 71 0 0 chr13 43453700 43453728 -76830584 + (CAT)n Simple_repeat Simple_repeat 2 29 0 9 916 442 248 112 8 chr13 43453728 43453781 -76830531 - B1F SINE Alu -80 69 2 9 916 224 197 85 134 chr13 43453935 43454017 -76830295 + B4 SINE B4 3 80 -212 9 916 834 237 26 31 chr13 43453944 43454136 -76830176 + B3A SINE B2 8 198 0 9 916 435 214 29 39 chr13 43454235 43454337 -76829975 + ID_B1 SINE B4 121 221 -3 9 916 359 117 0 77 chr13 43455026 43455091 -76829221 + HAL1-3A_ME LINE L1 1953 2012 -846 9 916 396 59 0 0 chr13 43455091 43455142 -76829170 + (TA)n Simple_repeat Simple_repeat 2 52 0 9 916 198 118 0 0 chr13 43455164 43455198 -76829114 + (TC)n Simple_repeat Simple_repeat 2 35 0 9 916 277 299 0 0 chr13 43455199 43455266 -76829046 - B4A SINE B4 -4 288 222 9 916 296 223 115 69 chr13 43455268 43455398 -76828914 - B1_Mm SINE Alu -7 140 5 9 916 1308 84 34 0 chr13 43455401 43455580 -76828732 - B2_Mm2 SINE B2 -10 185 1 9 916 438 234 0 0 chr13 43455580 43455674 -76828638 - B4A SINE B4 -197 95 2 9 916 259 321 0 0 chr13 43456165 43456246 -76828066 - ID4 SINE ID 0 83 3 9 916 750 180 131 76 chr13 43456268 43456466 -76827846 + B3 SINE B2 2 210 -6 9 916 885 242 115 9 chr13 43456706 43456923 -76827389 + B4 SINE B4 9 248 -44 9 916 1615 192 125 9 chr13 43457217 43457554 -76826758 - MTD LTR MaLR -15 404 29 9 916 315 0 0 0 chr13 43457993 43458028 -76826284 + (TC)n Simple_repeat Simple_repeat 2 36 0 9 916 837 123 62 55 chr13 43458051 43458197 -76826115 - B1_Mus1 SINE Alu -1 147 1 9 916 466 76 14 21 chr13 43458316 43458429 -76825883 - B2_Mm2 SINE B2 0 195 47 9 916 1288 107 23 0 chr13 43458468 43458645 -76825667 - B2_Mm2 SINE B2 -14 181 1 9 916 1760 255 84 37 chr13 43459035 43459548 -76824764 - RMER19C LTR ERVK 0 611 75 9 916 2103 28 24 0 chr13 43459671 43459924 -76824388 + L1Md_F2 LINE L1 6324 6582 0 9 916 373 200 24 24 chr13 43460065 43460147 -76824165 + ID4_ SINE ID 2 83 0 9 916 222 118 0 0 chr13 43460152 43460186 -76824126 + (AGGGGG)n Simple_repeat Simple_repeat 6 39 0 9 916 1000 29 54 68 chr13 43460215 43460363 -76823949 - B1_Mus2 SINE Alu 0 147 2 9 916 532 281 180 24 chr13 43461632 43461971 -76822341 - L1MA7 LINE L1 -28 6263 5872 9 916 1304 73 51 0 chr13 43461984 43462162 -76822150 - B2_Mm1a SINE B2 -5 188 2 9 916 767 288 87 25 chr13 43462174 43462530 -76821782 - L1MA7 LINE L1 -496 5804 5427 9 916 226 273 45 0 chr13 43462544 43462610 -76821702 - L1MA7 LINE L1 -929 5362 5294 9 916 511 262 53 41 chr13 43462610 43462781 -76821531 + MER90a LTR ERV1 90 262 -352 9 916 600 161 57 71 chr13 43463141 43463281 -76821031 + B1_Mur4 SINE Alu 3 140 -10 9 916 342 0 0 0 chr13 43463282 43463320 -76820992 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 9 916 1447 184 106 31 chr13 43463350 43463551 -76820761 - MTEb LTR MaLR -4 375 181 9 916 1330 95 16 16 chr13 43463551 43463743 -76820569 - B2_Mm2 SINE B2 -2 193 2 9 916 1447 184 106 31 chr13 43463743 43463890 -76820422 - MTEb LTR MaLR -199 180 1 9 916 843 194 0 0 chr13 43463925 43464064 -76820248 - B1_Mus1 SINE Alu -9 139 1 9 916 259 349 66 0 chr13 43464177 43464283 -76820029 - L1ME1 LINE L1 -31 6148 6036 9 916 218 274 0 0 chr13 43464376 43464427 -76819885 + (TATG)n Simple_repeat Simple_repeat 1 51 0 9 916 221 286 94 16 chr13 43464540 43464604 -76819708 - RSINE1 SINE B4 -14 151 83 9 916 231 270 94 16 chr13 43464595 43464659 -76819653 - RSINE1 SINE B4 -14 151 83 9 916 231 270 94 16 chr13 43464650 43464714 -76819598 - RSINE1 SINE B4 -14 151 83 9 916 231 270 94 16 chr13 43464705 43464769 -76819543 - RSINE1 SINE B4 -14 151 83 9 916 235 286 95 0 chr13 43464760 43464823 -76819489 - RSINE1 SINE B4 -14 151 83 9 916 231 270 94 16 chr13 43464814 43464878 -76819434 - RSINE1 SINE B4 -14 151 83 9 916 360 287 124 35 chr13 43464869 43465098 -76819214 - RSINE1 SINE B4 -23 269 13 9 916 636 158 99 30 chr13 43465099 43465230 -76819082 + B1_Mus2 SINE Alu 7 146 -1 9 916 226 175 63 0 chr13 43465450 43465513 -76818799 + T-rich Low_complexity Low_complexity 4 70 0 9 916 330 312 9 35 chr13 43465771 43465884 -76818428 + PB1D10 SINE Alu 8 117 0 9 916 611 227 49 7 chr13 43466686 43466828 -76817484 - RSINE1 SINE B4 -17 148 1 9 916 1031 190 67 0 chr13 43466875 43467070 -76817242 - B3 SINE B2 0 216 9 9 916 635 269 86 41 chr13 43467523 43467767 -76816545 + B4A SINE B4 23 277 -15 9 916 234 0 0 0 chr13 43467811 43467837 -76816475 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 916 659 223 73 149 chr13 43467838 43468139 -76816173 - RMER15 LTR ERVL -48 527 250 9 916 955 211 34 0 chr13 43468384 43468559 -76815753 - B3A SINE B2 -16 182 2 9 916 1609 207 132 8 chr13 43468726 43469096 -76815216 - MTD LTR MaLR -3 416 1 9 916 465 71 0 0 chr13 43469111 43469181 -76815131 + (CA)n Simple_repeat Simple_repeat 2 71 0 9 916 256 286 20 10 chr13 43469181 43469280 -76815032 + (CATATA)n Simple_repeat Simple_repeat 3 102 0 9 916 248 53 26 0 chr13 43470205 43470243 -76814069 + (TGGGGG)n Simple_repeat Simple_repeat 4 42 0 9 916 225 0 0 0 chr13 43470992 43471017 -76813295 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 916 354 138 0 0 chr13 43471017 43471075 -76813237 + (TA)n Simple_repeat Simple_repeat 2 59 0 9 916 390 267 0 82 chr13 43471081 43471338 -76812974 + (TATATG)n Simple_repeat Simple_repeat 1 236 0 9 916 416 249 5 73 chr13 43471283 43471474 -76812838 + (TATG)n Simple_repeat Simple_repeat 3 180 0 9 916 374 288 0 53 chr13 43471402 43471665 -76812647 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 9 916 195 162 0 0 chr13 43471679 43471716 -76812596 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 916 1853 131 201 3 chr13 43473093 43473422 -76810890 - ORR1B1 LTR MaLR 0 394 1 9 916 437 273 57 28 chr13 43473582 43473773 -76810539 - B3A SINE B2 -5 190 3 9 916 536 248 0 0 chr13 43473781 43473886 -76810426 - MTEa LTR MaLR -274 105 1 9 916 1223 159 88 199 chr13 43474465 43474897 -76809415 + ORR1C2 LTR MaLR 1 384 0 9 916 477 0 0 0 chr13 43475928 43475981 -76808331 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 9 916 508 0 16 0 chr13 43475981 43476042 -76808270 + LTRIS_Mus LTR ERV1 444 505 -82 9 916 281 24 49 0 chr13 43476042 43476083 -76808229 + (CAAAA)n Simple_repeat Simple_repeat 4 46 0 9 916 635 221 249 6 chr13 43476111 43476284 -76808028 + B3 SINE B2 2 216 0 9 916 416 250 21 21 chr13 43476418 43476512 -76807800 - PB1 SINE Alu -1 126 33 9 916 1115 190 24 0 chr13 43476760 43476971 -76807341 + B3 SINE B2 1 216 0 9 916 616 299 75 4 chr13 43477087 43477342 -76806970 + B4A SINE B4 1 273 -19 9 916 408 40 0 0 chr13 43477347 43477397 -76806915 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 916 195 42 0 0 chr13 43477470 43477494 -76806818 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 9 916 852 119 5 48 chr13 43477494 43477680 -76806632 + CT-rich Low_complexity Low_complexity 3 180 0 9 916 852 139 0 62 chr13 43477690 43477836 -76806476 - B1_Mus2 SINE Alu -9 138 2 9 916 376 276 77 23 chr13 43477871 43478001 -76806311 + B1F1 SINE Alu 13 149 0 9 916 185 269 0 13 chr13 43478666 43478745 -76805567 + CT-rich Low_complexity Low_complexity 4 81 0 9 916 628 229 68 82 chr13 43478824 43479043 -76805269 - B3 SINE B2 0 216 1 9 916 546 273 6 25 chr13 43479224 43479382 -76804930 - RSINE1 SINE B4 -10 155 1 9 916 495 343 66 14 chr13 43479530 43479743 -76804569 + MER58A DNA MER1_type 1 224 0 9 916 287 146 18 0 chr13 43479757 43479812 -76804500 + (TA)n Simple_repeat Simple_repeat 2 57 0 9 916 247 272 18 135 chr13 43480005 43480175 -76804137 + YREP_Mm Unknown Unknown 175 324 -1488 9 916 484 341 29 6 chr13 43480029 43480203 -76804109 - ID_B1 SINE B4 -6 218 41 9 916 502 127 18 3 chr13 43480580 43480662 -76803650 + B2_Mm2 SINE B2 53 143 -73 9 916 1223 36 0 0 chr13 43481089 43481228 -76803084 - B1_Mus2 SINE Alu -6 141 3 9 916 631 154 131 14 chr13 43481562 43481707 -76802605 + B2_Mm2 SINE B2 34 195 0 9 916 2926 33 0 3 chr13 43482162 43482500 -76801812 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 916 54790 22 29 19 chr13 43482500 43487464 -76796848 + IAPEz-int LTR ERVK 8 5082 -1399 9 916 180 309 0 105 chr13 43487464 43487540 -76796772 - L2 LINE L2 -3257 162 95 9 916 54790 22 29 19 chr13 43487540 43488907 -76795405 + IAPEz-int LTR ERVK 5083 6481 0 9 916 2926 33 0 3 chr13 43488907 43489245 -76795067 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 916 726 233 0 32 chr13 43489493 43489511 -76794801 + B1_Mur4 SINE Alu 1 17 -133 1 916 2450 105 9 14 chr13 43489511 43489859 -76794453 - ORR1A1 LTR MaLR 0 346 1 1 916 810 174 0 29 chr13 43489859 43489995 -76794317 + B1_Mur1 SINE Alu 18 149 0 1 916 209 322 11 11 chr13 43491056 43491144 -76793168 + L4 LINE RTE 1444 1531 -498 1 916 505 271 194 50 chr13 43491167 43491450 -76792862 - MTEb LTR MaLR -5 374 51 1 916 569 233 19 142 chr13 43492149 43492246 -76792066 - B3A SINE B2 -17 181 99 1 916 1102 70 0 14 chr13 43492246 43492381 -76791931 + B1_Mus1 SINE Alu 4 138 -10 1 916 198 0 0 0 chr13 43492381 43492403 -76791909 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 916 569 233 19 142 chr13 43492412 43492519 -76791793 - B3A SINE B2 -100 98 2 1 916 423 257 26 0 chr13 43492642 43492755 -76791557 - PB1D10 SINE Alu -1 116 1 1 916 824 122 14 28 chr13 43492857 43493001 -76791311 - B1_Mur4 SINE Alu 0 150 9 1 916 343 252 40 121 chr13 43492867 43493016 -76791296 - B4A SINE B4 -72 220 84 1 916 269 239 24 135 chr13 43492905 43493031 -76791281 - MT2B LTR ERVL -344 257 146 1 916 189 74 0 0 chr13 43493420 43493447 -76790865 + (TGGGGG)n Simple_repeat Simple_repeat 2 28 0 1 916 225 0 0 0 chr13 43493555 43493580 -76790732 + (A)n Simple_repeat Simple_repeat 1 25 0 1 916 234 91 0 0 chr13 43494528 43494561 -76789751 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 1 916 1247 41 0 0 chr13 43494561 43494707 -76789605 - B1_Mm SINE Alu 0 147 2 1 916 819 116 71 14 chr13 43495237 43495377 -76788935 - B1_Mur3 SINE Alu 0 149 2 1 916 259 289 0 62 chr13 43496513 43496594 -76787718 + ID4_ SINE ID 2 77 -6 1 916 218 197 49 0 chr13 43499237 43499298 -76785014 - PB1D9 SINE Alu 0 120 57 1 916 215 115 403 16 chr13 43499687 43499749 -76784563 - B1_Mus2 SINE Alu -53 94 9 1 916 270 237 39 26 chr13 43500314 43500392 -76783920 - B1_Mus2 SINE Alu -26 121 43 1 916 201 266 94 0 chr13 43502589 43502653 -76781659 + MIRb SINE MIR 30 99 -169 2 916 1163 185 151 24 chr13 43502778 43503110 -76781202 + ORR1D1 LTR MaLR 1 374 0 3 916 1137 79 140 0 chr13 43503217 43503381 -76780931 + B2_Mm2 SINE B2 2 188 -7 4 916 21 0 0 0 chr13 43504192 43504213 -76780099 + AT_rich Low_complexity Low_complexity 1 21 0 5 916 1265 34 0 0 chr13 43504606 43504753 -76779559 + B1_Mus2 SINE Alu 1 147 0 6 916 23 0 0 0 chr13 43504753 43504776 -76779536 + AT_rich Low_complexity Low_complexity 1 23 0 7 916 239 241 83 83 chr13 43505505 43505650 -76778662 + Charlie1b DNA MER1_type 317 461 -62 8 916 419 88 29 0 chr13 43505658 43505726 -76778586 + (TCCC)n Simple_repeat Simple_repeat 4 73 0 9 916 266 229 16 16 chr13 43507476 43507538 -76776774 + ORR1E LTR MaLR 1 62 -297 1 916 239 236 18 18 chr13 43508086 43508142 -76776170 - B1F2 SINE Alu -93 56 1 1 916 677 233 14 7 chr13 43508621 43508768 -76775544 - MIR SINE MIR -110 152 5 1 916 369 250 124 9 chr13 43510048 43510153 -76774159 - PB1D10 SINE Alu 0 117 1 1 916 295 293 39 47 chr13 43510487 43510616 -76773696 + MIRb SINE MIR 23 150 -118 1 916 24 53 0 0 chr13 43511147 43511185 -76773127 + AT_rich Low_complexity Low_complexity 1 38 0 1 916 422 116 14 14 chr13 43511441 43511511 -76772801 - B1_Mus2 SINE Alu -1 146 77 1 916 1104 173 19 33 chr13 43512284 43512499 -76771813 + B3 SINE B2 1 212 -4 1 916 1440 74 16 0 chr13 43514189 43514379 -76769933 + B2_Mm2 SINE B2 1 193 -2 1 916 629 208 7 37 chr13 43515438 43515573 -76768739 - B1_Mur1 SINE Alu 0 149 19 1 114 653 273 57 94 chr13 43515623 43516060 -76768252 + L1MB3 LINE L1 5477 5897 -286 2 917 23 54 0 0 chr13 43516872 43516909 -76767403 + AT_rich Low_complexity Low_complexity 1 37 0 2 917 215 169 118 44 chr13 43517697 43517765 -76766547 + PB1D7 SINE Alu 47 119 -1 2 917 581 121 144 5 chr13 43518769 43518989 -76765323 + Lx LINE L1 6340 6654 0 2 917 501 304 75 7 chr13 43519559 43519705 -76764607 - RSINE1 SINE B4 -4 161 6 2 917 24 0 0 0 chr13 43519724 43519748 -76764564 + AT_rich Low_complexity Low_complexity 1 24 0 2 917 725 123 0 19 chr13 43521111 43521219 -76763093 - U6 snRNA snRNA -1 106 1 2 917 264 302 129 0 chr13 43521468 43521607 -76762705 - MIRb SINE MIR -76 192 36 2 917 306 250 27 14 chr13 43521911 43521932 -76762380 - B4A SINE B4 -135 157 86 2 917 313 200 0 0 chr13 43521932 43521982 -76762330 - PB1D7 SINE Alu -70 50 1 2 917 23 54 0 0 chr13 43522183 43522220 -76762092 + AT_rich Low_complexity Low_complexity 1 37 0 3 917 537 189 136 24 chr13 43522366 43522491 -76761821 + B1_Mur4 SINE Alu 3 141 -9 3 917 939 213 53 19 chr13 43522674 43522880 -76761432 + B3 SINE B2 1 213 -3 3 917 477 257 96 6 chr13 43523711 43523882 -76760430 + B4 SINE B4 4 205 -87 3 917 180 111 0 0 chr13 43523925 43523952 -76760360 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 917 425 186 78 117 chr13 43524007 43524135 -76760177 + ORR1D2 LTR MaLR 240 362 -8 3 917 1220 41 7 0 chr13 43524262 43524408 -76759904 - B1_Mus2 SINE Alu 0 147 1 3 917 272 185 30 15 chr13 43524761 43524827 -76759485 + ID4 SINE ID 4 70 -13 3 917 838 301 12 0 chr13 43524947 43525120 -76759192 - B3A SINE B2 -23 175 1 3 917 235 246 43 14 chr13 43525527 43525597 -76758715 + ID4_ SINE ID 1 72 -11 3 917 220 259 178 17 chr13 43525597 43525645 -76758667 + ID_B1 SINE B4 1 137 -87 4 917 329 270 135 0 chr13 43526189 43526278 -76758034 + ID_B1 SINE B4 93 193 -31 4 917 306 292 26 70 chr13 43526278 43526303 -76758009 + PB1D9 SINE Alu 12 120 0 4 917 434 241 46 0 chr13 43526427 43526514 -76757798 + PB1D7 SINE Alu 22 112 -8 4 917 21 36 0 0 chr13 43527800 43527828 -76756484 + AT_rich Low_complexity Low_complexity 1 28 0 4 917 388 278 42 102 chr13 43528041 43528207 -76756105 - MER58B DNA MER1_type -18 323 165 4 917 204 327 108 10 chr13 43528365 43528467 -76755845 - MIR SINE MIR -148 114 3 4 917 312 91 0 0 chr13 43529006 43529050 -76755262 + (CAAG)n Simple_repeat Simple_repeat 4 47 0 4 917 565 254 59 6 chr13 43529407 43529577 -76754735 + B3A SINE B2 2 180 -18 4 917 428 278 50 43 chr13 43531742 43531881 -76752431 + RSINE1 SINE B4 4 143 -22 4 917 554 301 50 15 chr13 43531971 43532084 -76752228 + L1_Mur3 LINE L1 3083 3196 -2684 5 917 1154 48 14 0 chr13 43532084 43532229 -76752083 + B1_Mus1 SINE Alu 2 148 0 5 917 554 301 50 15 chr13 43532229 43532455 -76751857 + L1_Mur3 LINE L1 3197 3434 -2446 5 917 216 0 0 0 chr13 43532635 43532659 -76751653 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 5 917 373 218 78 17 chr13 43532671 43532853 -76751459 + L1MD LINE L1 3515 3717 -2429 5 917 263 289 13 0 chr13 43532867 43532943 -76751369 - L1M2 LINE L1 -2090 4053 3977 5 917 1613 173 112 17 chr13 43532946 43533293 -76751019 + ORR1C2 LTR MaLR 5 384 0 5 917 1641 273 78 34 chr13 43533322 43533935 -76750377 + L1_Mur3 LINE L1 3708 4360 -1520 5 917 241 26 53 0 chr13 43533935 43533973 -76750339 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 917 1641 273 78 34 chr13 43533973 43534043 -76750269 + L1_Mur3 LINE L1 4361 4421 -1459 5 917 425 342 12 30 chr13 43534043 43534209 -76750103 - RSINE1 SINE B4 0 165 3 5 917 1641 273 78 34 chr13 43534209 43534397 -76749915 + L1_Mur3 LINE L1 4422 4618 -1262 5 917 559 216 242 0 chr13 43534418 43534571 -76749741 + B3 SINE B2 3 192 -24 5 917 1034 287 111 6 chr13 43534595 43534938 -76749374 + MTE2b LTR MaLR 1 379 0 5 917 1016 264 89 59 chr13 43534994 43535050 -76749262 + L1_Mur3 LINE L1 4696 4754 -1126 5 917 246 62 0 0 chr13 43535050 43535082 -76749230 + (CAA)n Simple_repeat Simple_repeat 1 32 0 6 917 1016 264 89 59 chr13 43535082 43535741 -76748571 + L1_Mur3 LINE L1 4755 5432 -448 5 917 584 312 93 15 chr13 43535751 43535956 -76748356 - B4A SINE B4 -59 233 13 6 917 470 254 307 5 chr13 43536024 43536226 -76748086 + MTC LTR MaLR 135 397 -24 6 917 318 278 184 17 chr13 43537223 43537402 -76746910 + L1M5 LINE L1 4152 4360 -1786 6 917 1557 108 14 0 chr13 43537549 43537771 -76746541 - URR1B DNA MER1_type 0 225 1 6 917 919 238 180 44 chr13 43538134 43538473 -76745839 - MTD LTR MaLR 0 419 35 6 917 1026 178 40 40 chr13 43538720 43538942 -76745370 + URR1A DNA MER1_type 5 226 0 6 917 1122 57 0 7 chr13 43539427 43539568 -76744744 + B1_Mm SINE Alu 1 140 -7 6 917 347 317 114 31 chr13 43539794 43540022 -76744290 + L1MEe LINE L1 191 437 -4417 6 917 320 283 122 30 chr13 43540116 43540247 -76744065 + L1MEf LINE L1 1106 1248 -4952 6 917 256 232 0 0 chr13 43540319 43540375 -76743937 + L1M5 LINE L1 5399 5454 -990 6 917 668 224 123 15 chr13 43540729 43540924 -76743388 + B3 SINE B2 1 216 0 7 917 325 263 167 29 chr13 43541014 43541093 -76743219 - Tigger9b DNA MER2_type -193 431 344 7 917 1624 168 122 3 chr13 43541093 43541221 -76743091 + ORR1B2 LTR MaLR 1 153 -214 7 917 423 0 0 0 chr13 43541221 43541268 -76743044 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 7 917 1624 168 122 3 chr13 43541268 43541467 -76742845 + ORR1B2 LTR MaLR 154 366 -1 7 917 325 263 167 29 chr13 43541467 43541591 -76742721 - Tigger9b DNA MER2_type -281 343 200 7 917 218 242 0 46 chr13 43541810 43541875 -76742437 + T-rich Low_complexity Low_complexity 2 63 0 7 917 249 262 96 7 chr13 43542104 43542250 -76742062 + L1M4c LINE L1 1516 1674 -4710 7 917 2799 207 91 4 chr13 43542251 43543145 -76741167 + Lx4B LINE L1 5987 7000 0 7 917 566 248 22 8 chr13 43543181 43543315 -76740997 + RSINE1 SINE B4 1 136 -29 7 917 22 0 0 0 chr13 43543385 43543407 -76740905 + AT_rich Low_complexity Low_complexity 1 22 0 7 917 479 265 181 13 chr13 43543502 43543800 -76740512 + L1M4c LINE L1 4654 5001 -1381 7 917 366 305 0 48 chr13 43543900 43544024 -76740288 - PB1D7 SINE Alu 0 120 3 7 917 268 260 90 0 chr13 43544133 43544233 -76740079 + L1M4c LINE L1 5255 5363 -1019 7 917 243 0 0 0 chr13 43544233 43544260 -76740052 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 917 206 103 51 0 chr13 43544348 43544387 -76739925 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 8 917 1203 68 0 0 chr13 43544396 43544543 -76739769 - B1_Mus1 SINE Alu 0 148 2 8 917 262 159 0 73 chr13 43544830 43544842 -76739470 + A-rich Low_complexity Low_complexity 3 14 0 8 917 949 99 40 40 chr13 43544842 43544990 -76739322 + B1_Mus1 SINE Alu 1 148 0 8 917 262 159 0 73 chr13 43544990 43545045 -76739267 + A-rich Low_complexity Low_complexity 15 65 0 8 917 2267 49 10 13 chr13 43545303 43545612 -76738700 + L1_Mus3 LINE L1 5632 5939 -699 8 917 243 88 0 0 chr13 43545613 43545647 -76738665 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 8 917 625 264 180 16 chr13 43545827 43546016 -76738296 + ORR1D2 LTR MaLR 1 220 -150 8 917 381 205 158 45 chr13 43546052 43546185 -76738127 - B1F2 SINE Alu 0 149 2 8 917 588 235 17 0 chr13 43546229 43546348 -76737964 - RSINE1 SINE B4 -42 123 3 9 917 189 107 0 0 chr13 43546608 43546636 -76737676 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 9 917 430 101 0 0 chr13 43547008 43547077 -76737235 + L1_Mus2 LINE L1 6498 6566 0 9 917 505 146 82 30 chr13 43547274 43547408 -76736904 + RMER17C LTR ERVK 135 275 -135 9 917 342 0 0 0 chr13 43547409 43547447 -76736865 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 9 917 458 281 160 58 chr13 43547512 43547633 -76736679 + Lx8 LINE L1 4531 4660 -1220 9 917 194 0 39 0 chr13 43547633 43547659 -76736653 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 9 917 586 261 227 23 chr13 43547659 43548717 -76735595 + Lx8 LINE L1 4661 5972 -1672 9 917 708 208 27 27 chr13 43548966 43549114 -76735198 - B1_Mur1 SINE Alu 0 149 2 9 917 270 0 0 0 chr13 43549165 43549195 -76735117 + (CATA)n Simple_repeat Simple_repeat 3 32 0 9 917 482 285 53 7 chr13 43549264 43549416 -76734896 + RSINE1 SINE B4 4 162 -3 9 917 453 293 148 5 chr13 43549532 43549755 -76734557 - Lx7 LINE L1 -382 7314 7060 1 917 324 0 0 0 chr13 43549944 43549980 -76734332 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 917 414 135 250 0 chr13 43550092 43550188 -76734124 - PB1D9 SINE Alu 0 120 1 1 917 1512 16 60 6 chr13 43550290 43550473 -76733839 - B2_Mm1a SINE B2 0 193 1 1 917 424 197 60 60 chr13 43550754 43550895 -76733417 - B1F2 SINE Alu -2 147 3 1 917 338 261 69 126 chr13 43550895 43550929 -76733383 - ID_B1 SINE B4 -1 223 59 1 917 981 155 77 0 chr13 43551088 43551269 -76733043 + B2_Mm2 SINE B2 1 195 0 1 917 1039 61 0 0 chr13 43551368 43551500 -76732812 + B1_Mus2 SINE Alu 14 145 -2 1 917 516 244 33 38 chr13 43552711 43552894 -76731418 - B3A SINE B2 -16 182 1 1 917 275 191 16 0 chr13 43552920 43552983 -76731329 + CT-rich Low_complexity Low_complexity 3 66 0 1 917 776 156 63 14 chr13 43553048 43553191 -76731121 + B1_Mur4 SINE Alu 1 150 0 1 917 31 44 0 0 chr13 43553689 43553734 -76730578 + AT_rich Low_complexity Low_complexity 1 45 0 1 917 495 0 0 0 chr13 43554496 43554551 -76729761 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 917 798 268 130 19 chr13 43554611 43555072 -76729240 + L1MD3 LINE L1 5471 5982 -2013 1 917 760 33 113 8 chr13 43556199 43556323 -76727989 + L1Md_F3 LINE L1 6448 6584 0 1 917 1155 62 14 0 chr13 43556335 43556479 -76727833 + B1_Mus2 SINE Alu 2 147 0 1 917 204 125 0 0 chr13 43556479 43556511 -76727801 + (A)n Simple_repeat Simple_repeat 1 32 0 1 917 982 130 14 0 chr13 43557417 43557563 -76726749 + B1_Mur4 SINE Alu 3 150 0 1 917 709 194 165 6 chr13 43557651 43557827 -76726485 - B3 SINE B2 -12 204 1 1 917 1053 44 14 35 chr13 43558164 43558306 -76726006 + B1_Mus1 SINE Alu 1 139 -9 1 917 912 117 0 0 chr13 43558306 43558451 -76725861 + (GAAAA)n Simple_repeat Simple_repeat 2 146 0 1 917 809 80 312 7 chr13 43558521 43558659 -76725653 - B2_Mm2 SINE B2 -14 181 2 1 917 476 268 173 0 chr13 43559526 43559653 -76724659 - RSINE1 SINE B4 -14 151 3 1 917 1929 224 187 32 chr13 43559919 43560607 -76723705 + Lx8 LINE L1 6274 7068 -405 1 917 343 295 11 0 chr13 43560707 43560802 -76723510 + RMER15 LTR ERVL 371 466 -109 1 917 459 0 0 0 chr13 43560803 43560854 -76723458 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 917 208 327 45 0 chr13 43561143 43561253 -76723059 - MIR SINE MIR -38 224 110 1 917 890 152 228 0 chr13 43561793 43561977 -76722335 - URR1A DNA MER1_type 0 226 1 1 917 5421 77 96 11 chr13 43561997 43562791 -76721521 + L1_Mus3 LINE L1 5778 6638 0 1 917 1234 48 0 0 chr13 43562797 43562944 -76721368 + B1_Mm SINE Alu 1 147 0 1 917 336 268 0 0 chr13 43562968 43563039 -76721273 + ID SINE ID 4 74 -150 1 917 322 293 6 17 chr13 43563039 43563094 -76721218 + ID4_ SINE ID 4 128 -24 1 917 269 286 88 0 chr13 43563246 43563337 -76720975 + B1F SINE Alu 46 144 -5 1 917 21 36 0 0 chr13 43563472 43563500 -76720812 + AT_rich Low_complexity Low_complexity 1 28 0 1 917 381 270 10 29 chr13 43563528 43563631 -76720681 - RSINE1 SINE B4 -44 121 21 1 917 460 194 25 92 chr13 43563654 43563773 -76720539 - B1_Mur2 SINE Alu -5 144 34 1 917 1370 81 54 0 chr13 43563865 43564050 -76720262 + B2_Mm2 SINE B2 1 195 0 1 917 207 0 0 0 chr13 43564191 43564214 -76720098 + (CAGC)n Simple_repeat Simple_repeat 1 23 0 1 917 4121 132 53 12 chr13 43564450 43565141 -76719171 + RMER6D LTR ERVK 1 720 0 1 917 271 281 47 35 chr13 43565386 43565471 -76718841 + Tigger9a DNA Tigger 3 88 -644 1 917 289 244 132 50 chr13 43565514 43565635 -76718677 + Tigger9a DNA Tigger 174 304 -428 1 917 443 225 81 95 chr13 43565713 43565934 -76718378 - L1MC3 LINE L1 -1365 6420 6203 1 917 589 273 8 0 chr13 43565934 43566066 -76718246 + ID_B1 SINE B4 78 210 -14 1 917 1060 186 22 39 chr13 43566067 43566200 -76718112 - URR1A DNA MER1_type 0 226 96 1 917 1176 88 0 0 chr13 43566200 43566347 -76717965 + B1_Mus1 SINE Alu 1 147 -1 1 917 1060 186 22 39 chr13 43566347 43566404 -76717908 - URR1A DNA MER1_type -131 95 42 1 917 225 0 0 0 chr13 43566404 43566429 -76717883 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 917 1060 186 22 39 chr13 43566429 43566467 -76717845 - URR1A DNA MER1_type -185 41 3 1 917 290 273 136 0 chr13 43566562 43566672 -76717640 + PB1 SINE Alu 1 125 -2 1 917 1219 274 112 93 chr13 43566748 43567489 -76716823 - L1MC3 LINE L1 -1584 6201 5447 1 917 3863 2 0 0 chr13 43567501 43567922 -76716390 - L1Md_A LINE L1 0 6582 6162 1 917 548 322 80 29 chr13 43567933 43568208 -76716104 + Tigger9a DNA Tigger 444 732 0 1 917 408 325 47 60 chr13 43569644 43570008 -76714304 + ORR1E LTR MaLR 1 359 0 1 917 691 208 27 20 chr13 43570315 43570462 -76713850 + B1_Mur1 SINE Alu 2 149 0 1 917 830 186 75 0 chr13 43570919 43571118 -76713194 + URR1B DNA MER1_type 12 225 0 1 917 307 229 122 19 chr13 43571470 43571577 -76712735 - PB1D9 SINE Alu 0 120 3 1 917 413 273 96 99 chr13 43571626 43571919 -76712393 - B4A SINE B4 0 292 1 1 917 263 282 155 39 chr13 43571998 43572127 -76712185 + RSINE1 SINE B4 14 157 -8 1 917 738 226 18 18 chr13 43572230 43572401 -76711911 + B3A SINE B2 1 171 -27 1 917 968 209 70 0 chr13 43572754 43572955 -76711357 - B3 SINE B2 -1 215 1 1 917 579 231 0 0 chr13 43573277 43573398 -76710914 + RSINE1 SINE B4 26 146 -19 1 917 243 0 0 0 chr13 43573410 43573437 -76710875 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 917 21 82 0 0 chr13 43575973 43576022 -76708290 + GC_rich Low_complexity Low_complexity 1 49 0 1 917 298 98 48 12 chr13 43576034 43576117 -76708195 + (CGG)n Simple_repeat Simple_repeat 2 87 0 1 917 23 78 0 0 chr13 43576157 43576208 -76708104 + GC_rich Low_complexity Low_complexity 1 51 0 1 917 287 96 0 19 chr13 43576233 43576286 -76708026 + (CGG)n Simple_repeat Simple_repeat 1 52 0 1 917 202 283 20 40 chr13 43576414 43576565 -76707747 + (CGGG)n Simple_repeat Simple_repeat 4 151 0 1 917 183 80 0 0 chr13 43576651 43576676 -76707636 + (CGGG)n Simple_repeat Simple_repeat 3 27 0 1 917 24 77 0 0 chr13 43576687 43576739 -76707573 + GC_rich Low_complexity Low_complexity 1 52 0 1 917 1352 101 11 0 chr13 43577966 43578155 -76706157 + B2_Mm2 SINE B2 2 192 -3 1 917 1104 228 42 59 chr13 43578436 43578725 -76705587 + B4 SINE B4 9 292 0 1 917 26 64 0 0 chr13 43579247 43579294 -76705018 + AT_rich Low_complexity Low_complexity 1 47 0 1 917 1068 299 79 34 chr13 43579997 43580089 -76704223 - MLT1F2 LTR MaLR 0 560 454 1 917 1263 228 108 77 chr13 43580089 43580451 -76703861 - ORR1D1 LTR MaLR -1 373 1 1 917 1068 299 79 34 chr13 43580451 43580854 -76703458 - MLT1F2 LTR MaLR -107 453 43 1 917 498 351 16 16 chr13 43580932 43581123 -76703189 - MER58A DNA MER1_type 0 224 34 1 917 228 231 52 103 chr13 43582579 43582695 -76701617 - PB1D7 SINE Alu -1 119 10 1 917 457 231 46 0 chr13 43582831 43582939 -76701373 + PB1D10 SINE Alu 1 113 -4 1 917 239 0 0 31 chr13 43583075 43583107 -76701205 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1 917 1407 53 5 0 chr13 43583631 43583818 -76700494 - ORR1A2 LTR MaLR 0 327 140 1 917 876 125 20 7 chr13 43583959 43584112 -76700200 - ORR1A2 LTR MaLR -191 155 1 1 917 237 330 50 34 chr13 43584119 43584238 -76700074 - Tigger12c DNA MER2_type -523 211 91 1 917 1935 136 3 12 chr13 43584378 43584699 -76699613 - MTC LTR MaLR 0 421 104 1 917 979 144 178 26 chr13 43584711 43585099 -76699213 + RMER6B LTR ERVK 1 447 -14 1 917 203 0 0 36 chr13 43585107 43585135 -76699177 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 917 389 200 0 24 chr13 43585146 43585228 -76699084 - MTC LTR MaLR -338 83 4 1 917 202 206 0 0 chr13 43585305 43585339 -76698973 + polypyrimidine Low_complexity Low_complexity 1 34 0 1 917 393 95 0 0 chr13 43585372 43585435 -76698877 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 917 485 301 25 41 chr13 43585499 43585696 -76698616 - B4A SINE B4 -89 203 10 1 917 1881 189 5 24 chr13 43585950 43586330 -76697982 - ORR1D1 LTR MaLR 0 374 2 1 917 444 19 0 0 chr13 43586578 43586631 -76697681 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 917 665 143 101 0 chr13 43586723 43586842 -76697470 + B1_Mur4 SINE Alu 1 131 -19 1 917 269 322 94 62 chr13 43587260 43587535 -76696777 - LTR16A1 LTR ERVL 0 456 173 1 917 931 251 67 49 chr13 43587925 43588314 -76695998 + MTD LTR MaLR 1 396 -23 1 917 1128 267 114 39 chr13 43589244 43589840 -76694472 + L1MB8 LINE L1 5489 6129 -49 1 917 581 272 77 29 chr13 43589907 43590108 -76694204 + ID_B1 SINE B4 7 219 -5 1 917 850 146 80 0 chr13 43590108 43590245 -76694067 + B1_Mus1 SINE Alu 1 148 0 1 917 37 44 0 14 chr13 43590271 43590311 -76694001 + AT_rich Low_complexity Low_complexity 1 40 0 1 917 935 207 64 0 chr13 43590311 43590514 -76693798 + B3 SINE B2 1 216 0 1 917 37 44 0 14 chr13 43590514 43590542 -76693770 + AT_rich Low_complexity Low_complexity 1 28 0 1 917 795 245 184 64 chr13 43590597 43590924 -76693388 + ORR1D2 LTR MaLR 3 368 -2 1 917 320 0 25 0 chr13 43590935 43590975 -76693337 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1 917 242 258 58 58 chr13 43591434 43591537 -76692775 + ORR1E LTR MaLR 1 103 -256 1 917 381 161 48 24 chr13 43591783 43591866 -76692446 + MLT1A1 LTR MaLR 320 404 -4 1 917 270 0 0 0 chr13 43592440 43592470 -76691842 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 1 917 536 309 0 19 chr13 43593058 43593213 -76691099 + ID_B1 SINE B4 73 224 0 1 917 528 267 110 12 chr13 43593226 43593389 -76690923 + B3A SINE B2 4 182 -16 1 917 446 230 81 8 chr13 43593721 43593827 -76690485 - ID_B1 SINE B4 -88 204 86 1 917 21 0 0 0 chr13 43593942 43593963 -76690349 + AT_rich Low_complexity Low_complexity 1 21 0 2 917 716 185 0 8 chr13 43593973 43594104 -76690208 - B3 SINE B2 -86 130 1 2 917 302 210 11 90 chr13 43594965 43595054 -76689258 + ID4_ SINE ID 2 83 0 2 917 724 252 0 18 chr13 43595221 43595387 -76688925 - RSINE1 SINE B4 0 165 3 2 917 200 163 41 0 chr13 43595564 43595613 -76688699 + (CTTA)n Simple_repeat Simple_repeat 2 52 0 2 917 1222 216 26 61 chr13 43595621 43595931 -76688381 - Lx5 LINE L1 -38 7012 6714 2 917 187 296 0 0 chr13 43595968 43596022 -76688290 + MIR SINE MIR 95 148 -60 2 917 181 321 90 18 chr13 43596151 43596262 -76688050 - MIR SINE MIR -116 146 28 2 917 1073 83 0 0 chr13 43596908 43597041 -76687271 + B1_Mus2 SINE Alu 4 136 -11 2 917 1539 158 87 26 chr13 43597060 43597404 -76686908 + ORR1C1 LTR MaLR 13 377 -1 2 917 282 271 0 0 chr13 43597877 43597947 -76686365 + B4A SINE B4 2 71 -221 2 917 807 102 0 0 chr13 43598114 43598251 -76686061 + (TC)n Simple_repeat Simple_repeat 1 137 0 2 917 399 21 0 0 chr13 43598251 43598298 -76686014 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 917 466 257 18 9 chr13 43598534 43598648 -76685664 + PB1D10 SINE Alu 1 115 -2 2 917 225 305 12 0 chr13 43599667 43599749 -76684563 + ORR1E LTR MaLR 2 84 -275 2 917 408 294 24 67 chr13 43599773 43599937 -76684375 + RSINE1 SINE B4 3 159 -6 2 917 21 57 0 0 chr13 43599984 43600019 -76684293 + AT_rich Low_complexity Low_complexity 1 35 0 2 917 1488 205 42 107 chr13 43600410 43600858 -76683454 + MTD LTR MaLR 1 419 0 2 917 361 129 18 73 chr13 43600918 43601027 -76683285 + (TATG)n Simple_repeat Simple_repeat 4 106 0 2 917 332 136 0 33 chr13 43601028 43601089 -76683223 - HAL1-3A_ME LINE L1 -840 2018 1960 2 917 945 292 45 53 chr13 43601538 43601893 -76682419 + ORR1E LTR MaLR 8 359 0 2 917 522 0 0 0 chr13 43601915 43601973 -76682339 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 917 318 313 67 92 chr13 43601979 43602412 -76681900 - MLT1C LTR MaLR -5 462 41 2 917 429 204 81 27 chr13 43602422 43602533 -76681779 - PB1D10 SINE Alu 0 117 1 2 917 484 260 134 0 chr13 43602676 43602803 -76681509 + B1F SINE Alu 1 144 -5 2 917 183 235 0 0 chr13 43603236 43603287 -76681025 + CT-rich Low_complexity Low_complexity 3 53 0 2 917 210 71 0 0 chr13 43603293 43603321 -76680991 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 2 917 221 259 155 0 chr13 43603321 43603379 -76680933 - ID4_ SINE ID -9 74 8 2 917 243 0 0 0 chr13 43603381 43603408 -76680904 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 917 424 298 0 0 chr13 43603412 43603506 -76680806 - PB1D10 SINE Alu -6 111 18 2 917 1733 131 31 27 chr13 43604715 43605059 -76679253 - ORR1B1 LTR MaLR 0 394 1 2 917 763 261 33 0 chr13 43605064 43605137 -76679175 + ID SINE ID 4 82 -142 2 917 346 284 8 79 chr13 43605137 43605263 -76679049 + PB1D10 SINE Alu 1 117 0 2 917 907 105 0 22 chr13 43605326 43605462 -76678850 + B1_Mur2 SINE Alu 17 149 0 2 917 426 20 0 0 chr13 43605495 43605546 -76678766 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 917 251 333 12 0 chr13 43605546 43605627 -76678685 + MER58B DNA MER1_type 258 339 -2 2 917 540 30 0 0 chr13 43605900 43605966 -76678346 + (GGGGA)n Simple_repeat Simple_repeat 2 67 0 2 917 328 25 0 0 chr13 43606999 43607039 -76677273 - HAL1-3A_ME LINE L1 -844 2014 1975 2 917 423 238 9 45 chr13 43607039 43607149 -76677163 - RSINE1 SINE B4 0 165 60 2 917 424 233 307 0 chr13 43607492 43607707 -76676605 - L1M5 LINE L1 -471 5708 5428 2 917 808 174 72 11 chr13 43607715 43607895 -76676417 - B3 SINE B2 -7 191 1 2 917 337 309 51 17 chr13 43607898 43608076 -76676236 - L1M4 LINE L1 -742 5438 5255 2 917 1027 275 12 28 chr13 43608119 43608440 -76675872 + ORR1E LTR MaLR 1 296 -74 2 917 624 212 0 15 chr13 43608473 43608607 -76675705 - B1_Mur3 SINE Alu -9 140 9 2 917 375 184 13 13 chr13 43608612 43608689 -76675623 + ORR1E LTR MaLR 303 379 0 2 917 391 295 76 86 chr13 43608691 43608804 -76675508 - L1M4 LINE L1 -1001 5145 5037 2 917 570 324 14 5 chr13 43608804 43609015 -76675297 - ID_B1 SINE B4 -11 213 1 2 917 391 297 75 86 chr13 43609015 43609444 -76674868 - L1M4 LINE L1 -1110 5036 4607 2 917 213 309 14 14 chr13 43609928 43609997 -76674315 + ID4_ SINE ID 5 73 -10 2 917 1164 221 115 19 chr13 43610092 43610243 -76674069 - ORR1E LTR MaLR -4 355 184 2 917 627 14 0 0 chr13 43610243 43610315 -76673997 + (GGGA)n Simple_repeat Simple_repeat 3 74 0 2 917 1164 221 115 19 chr13 43610315 43610485 -76673827 - ORR1E LTR MaLR -176 183 4 2 917 277 351 122 0 chr13 43610865 43611013 -76673299 - MER5A1 DNA MER1_type 0 166 1 2 917 278 148 0 18 chr13 43611119 43611174 -76673138 + CT-rich Low_complexity Low_complexity 2 55 0 2 917 286 216 0 81 chr13 43611469 43611580 -76672732 + BC1_Mm scRNA scRNA 8 109 -43 2 917 1109 258 48 42 chr13 43612203 43612559 -76671753 - ORR1E LTR MaLR 0 359 2 2 917 387 288 78 13 chr13 43612875 43613021 -76671291 - L2a LINE L2 0 3426 3226 2 917 1085 269 84 25 chr13 43613094 43613452 -76670860 - MTEa LTR MaLR 0 379 1 2 917 180 330 75 0 chr13 43613779 43613873 -76670439 - L2a LINE L2 -206 3169 3069 2 917 232 280 45 106 chr13 43614087 43614219 -76670093 - B3 SINE B2 -7 209 86 2 917 410 241 174 26 chr13 43614140 43614253 -76670059 - RSINE1 SINE B4 -19 146 17 2 917 876 208 16 98 chr13 43614253 43614498 -76669814 - URR1A DNA MER1_type 0 226 2 2 917 576 274 118 19 chr13 43614520 43614732 -76669580 - B4A SINE B4 -59 233 1 2 917 585 0 0 0 chr13 43615511 43615576 -76668736 + (ATGTG)n Simple_repeat Simple_repeat 1 65 0 2 917 576 103 19 9 chr13 43615623 43615731 -76668581 + (TG)n Simple_repeat Simple_repeat 2 110 0 2 917 943 219 24 55 chr13 43615740 43616030 -76668282 - B4A SINE B4 -10 282 2 2 917 232 348 89 0 chr13 43616361 43616519 -76667793 + L2a LINE L2 1834 2005 -1414 2 917 850 150 30 0 chr13 43616600 43616733 -76667579 - B1_Mus2 SINE Alu -5 142 6 2 917 434 247 88 110 chr13 43616601 43616783 -76667529 - B4 SINE B4 -72 220 43 2 917 236 338 0 13 chr13 43616793 43616868 -76667444 + L2a LINE L2 2175 2248 -1171 2 917 237 132 0 0 chr13 43617015 43617053 -76667259 + (CGTG)n Simple_repeat Simple_repeat 1 38 0 2 917 497 335 140 28 chr13 43617210 43617566 -76666746 + L2a LINE L2 2988 3383 -43 2 917 240 264 102 11 chr13 43617666 43617754 -76666558 - ORR1E LTR MaLR -3 376 281 2 917 256 323 44 59 chr13 43617872 43618007 -76666305 - ORR1E LTR MaLR -164 195 63 2 917 434 105 0 0 chr13 43618272 43618329 -76665983 - ORR1A1 LTR MaLR 0 346 290 2 917 557 39 0 38 chr13 43618331 43618411 -76665901 - L1_Mus2 LINE L1 0 6566 6490 2 917 363 45 0 0 chr13 43618411 43618455 -76665857 + L1_Mus2 LINE L1 6155 6198 -368 2 917 1871 152 3 3 chr13 43618455 43618759 -76665553 - ORR1A1 LTR MaLR -42 304 1 2 917 1216 22 0 0 chr13 43618921 43619058 -76665254 + B1_Mm SINE Alu 2 138 -9 2 917 306 0 0 0 chr13 43619058 43619092 -76665220 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 917 186 311 87 10 chr13 43619196 43619300 -76665012 + MIRc SINE MIR 4 115 -153 2 917 333 0 0 0 chr13 43619314 43619351 -76664961 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 917 207 0 0 0 chr13 43619685 43619708 -76664604 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 917 217 284 46 69 chr13 43619713 43619800 -76664512 - ID_B1 SINE B4 -130 94 10 2 917 246 245 51 60 chr13 43619726 43619809 -76664503 - ID2 SINE ID -67 85 1 2 917 303 28 0 0 chr13 43620780 43620816 -76663496 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 917 372 22 0 0 chr13 43621062 43621107 -76663205 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 917 297 0 0 0 chr13 43621582 43621615 -76662697 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 917 292 196 0 0 chr13 43621857 43621908 -76662404 - ID2 SINE ID -10 73 23 2 917 1061 280 7 17 chr13 43621955 43622246 -76662066 + B4 SINE B4 1 288 -4 2 917 868 121 8 0 chr13 43622293 43622417 -76661895 + B1_Mus2 SINE Alu 14 138 -9 2 917 4456 41 85 0 chr13 43622704 43623245 -76661067 + LTRIS_Mus LTR ERV1 1 587 0 2 917 772 278 24 82 chr13 43623585 43623675 -76660637 + B4A SINE B4 2 94 -198 2 917 1220 48 7 0 chr13 43623675 43623821 -76660491 + B1_Mm SINE Alu 1 147 0 2 917 772 278 24 82 chr13 43623821 43624024 -76660288 + B4A SINE B4 95 278 -14 2 917 406 323 32 46 chr13 43624180 43624389 -76659923 + MLT1H2 LTR MaLR 373 564 -15 2 917 466 265 98 0 chr13 43624528 43624660 -76659652 + MER5A DNA MER1_type 10 154 -35 2 917 680 271 112 0 chr13 43624669 43624857 -76659455 + ID_B1 SINE B4 8 216 -8 2 917 825 145 13 46 chr13 43627632 43627784 -76656528 + B1_Mus1 SINE Alu 1 147 -1 2 917 261 194 15 0 chr13 43627803 43627870 -76656442 + (CAA)n Simple_repeat Simple_repeat 1 68 0 2 917 478 209 171 9 chr13 43628151 43628262 -76656050 + B3 SINE B2 34 162 -54 2 917 859 197 0 7 chr13 43628380 43628528 -76655784 - B1_Mur1 SINE Alu 0 149 3 2 917 180 339 52 35 chr13 43629222 43629338 -76654974 + MIR SINE MIR 48 165 -97 2 917 230 333 59 22 chr13 43629352 43629487 -76654825 + RLTR4_Mm LTR ERV1 199 338 -404 2 917 375 306 89 50 chr13 43629465 43629644 -76654668 + MLT1A0 LTR MaLR 15 200 -165 2 917 763 209 117 30 chr13 43629981 43630178 -76654134 + B3 SINE B2 3 216 0 2 917 302 340 87 76 chr13 43630478 43630650 -76653662 + MLT1A0 LTR MaLR 253 442 -168 2 917 3143 166 34 14 chr13 43630657 43631215 -76653097 - RMER15 LTR ERVL -6 569 1 2 917 288 0 0 0 chr13 43631309 43631341 -76652971 + (T)n Simple_repeat Simple_repeat 1 32 0 2 917 1324 90 0 6 chr13 43631396 43631574 -76652738 + B2_Mm2 SINE B2 4 180 -15 2 917 508 297 12 48 chr13 43631777 43631943 -76652369 + RSINE1 SINE B4 4 163 -2 2 917 1087 253 33 15 chr13 43632315 43632588 -76651724 + B4A SINE B4 1 278 -14 3 917 264 279 113 41 chr13 43633114 43633211 -76651101 - PB1D7 SINE Alu 0 120 17 3 917 249 143 0 160 chr13 43634720 43634795 -76649517 + B4A SINE B4 82 144 -148 3 917 320 182 40 23 chr13 43634750 43634849 -76649463 + B1F SINE Alu 15 116 -1 3 917 201 167 0 27 chr13 43636275 43636312 -76648000 + GA-rich Low_complexity Low_complexity 2 37 0 3 917 367 175 83 4 chr13 43636312 43636410 -76647902 + PB1D10 SINE Alu 31 141 -8 3 917 3523 25 2 0 chr13 43637332 43637727 -76646585 + MTA_Mm LTR MaLR 1 396 0 3 917 9463 30 2 1 chr13 43637727 43638824 -76645488 + MTA_Mm-int LTR MaLR 1 1098 0 3 917 3523 25 2 0 chr13 43638824 43639219 -76645093 + MTA_Mm LTR MaLR 1 396 0 3 917 189 319 72 48 chr13 43640037 43640162 -76644150 + MIRm SINE MIR 35 162 -114 3 917 333 47 0 0 chr13 43640813 43640856 -76643456 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 917 1464 167 186 1 chr13 43641273 43641625 -76642687 + MTD LTR MaLR 1 405 -14 3 917 22 0 0 0 chr13 43641674 43641696 -76642616 + AT_rich Low_complexity Low_complexity 1 22 0 3 917 235 329 0 14 chr13 43642586 43642660 -76641652 - tRNA-Ala-GCA tRNA tRNA 0 75 3 3 917 312 94 0 0 chr13 43643220 43643273 -76641039 + (A)n Simple_repeat Simple_repeat 1 53 0 3 917 473 272 13 58 chr13 43645063 43645219 -76639093 + B1F1 SINE Alu 1 149 0 3 917 412 206 133 60 chr13 43645568 43645718 -76638594 + RSINE1 SINE B4 3 163 -2 3 917 971 185 120 0 chr13 43645741 43645925 -76638387 + B3 SINE B2 1 206 -10 3 918 761 138 116 7 chr13 43647106 43647252 -76637060 + RLTR16 LTR ERVK 232 393 -112 3 918 324 0 0 0 chr13 43647252 43647288 -76637024 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 918 3031 129 9 9 chr13 43647551 43648012 -76636300 - RMER4A LTR ERVK 0 466 6 3 918 672 286 72 25 chr13 43648433 43648670 -76635642 - B4A SINE B4 -1 291 44 3 918 722 276 17 11 chr13 43648687 43648863 -76635449 + B3A SINE B2 22 198 0 3 918 711 259 89 45 chr13 43649168 43649201 -76635111 + ID SINE ID 2 29 -195 3 918 3342 52 2 2 chr13 43649201 43649608 -76634704 + MTB_Mm LTR MaLR 1 407 0 3 918 711 259 89 45 chr13 43649608 43649776 -76634536 + ID_B1 SINE B4 30 212 -12 3 918 1292 246 104 17 chr13 43649819 43650166 -76634146 + MTD LTR MaLR 42 418 -1 3 918 723 280 216 17 chr13 43650785 43651309 -76633003 - L1MB5 LINE L1 -227 5947 5320 3 918 670 196 45 8 chr13 43651324 43651458 -76632854 + B1_Mur2 SINE Alu 1 139 -10 3 918 288 0 0 0 chr13 43651458 43651490 -76632822 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 918 364 253 53 0 chr13 43651491 43651566 -76632746 - B3A SINE B2 -101 97 19 3 918 750 146 48 24 chr13 43651576 43651702 -76632610 - B1_Mur3 SINE Alu -16 133 5 3 918 913 272 15 0 chr13 43652037 43652232 -76632080 + ID_B1 SINE B4 2 199 -25 3 918 1131 159 72 5 chr13 43652398 43652606 -76631706 - URR1A DNA MER1_type -2 224 3 3 918 2243 73 39 60 chr13 43652733 43653067 -76631245 + ORR1A2 LTR MaLR 1 327 0 3 918 323 187 200 0 chr13 43653079 43653154 -76631158 + B3 SINE B2 2 91 -125 3 918 462 320 115 8 chr13 43653170 43653431 -76630881 - B4A SINE B4 -3 289 1 3 918 458 172 69 20 chr13 43654101 43654202 -76630110 + PB1D9 SINE Alu 5 110 -10 3 918 480 191 217 42 chr13 43656064 43656184 -76628128 - B1_Mur2 SINE Alu 0 149 9 3 918 402 74 0 0 chr13 43656434 43656488 -76627824 + (GGGGA)n Simple_repeat Simple_repeat 2 55 0 3 918 1601 213 70 27 chr13 43656511 43656925 -76627387 - RMER10A LTR ERVL -10 432 1 3 918 423 0 0 0 chr13 43656957 43657004 -76627308 + (TCC)n Simple_repeat Simple_repeat 2 48 0 3 918 257 291 12 12 chr13 43657313 43657393 -76626919 - MADE2 DNA Mariner 0 80 1 3 918 470 252 78 0 chr13 43657408 43657523 -76626789 + ID_B1 SINE B4 80 203 -21 3 918 380 307 93 38 chr13 43657670 43657907 -76626405 - L1ME2 LINE L1 -7 6157 5908 3 918 519 303 17 11 chr13 43658073 43658253 -76626059 - L1ME2 LINE L1 -500 5679 5499 3 918 505 199 180 31 chr13 43658363 43658591 -76625721 + L1MEf LINE L1 1855 2116 -4084 3 918 253 305 49 0 chr13 43658600 43658682 -76625630 - MER58C DNA MER1_type -1 214 129 3 918 28 48 0 0 chr13 43658819 43658861 -76625451 + AT_rich Low_complexity Low_complexity 1 42 0 3 918 21 57 0 0 chr13 43659141 43659176 -76625136 + AT_rich Low_complexity Low_complexity 1 35 0 3 918 531 301 94 67 chr13 43659321 43659516 -76624796 - Zaphod DNA Tip100 -3078 953 728 3 918 923 108 31 0 chr13 43659516 43659646 -76624666 + B1_Mus1 SINE Alu 5 138 -10 3 918 531 301 94 67 chr13 43659646 43659973 -76624339 - Zaphod DNA Tip100 -3304 727 417 3 918 180 97 0 0 chr13 43660091 43660122 -76624190 + (CAT)n Simple_repeat Simple_repeat 2 32 0 3 918 659 182 247 0 chr13 43660122 43660292 -76624020 - B3 SINE B2 -1 215 4 3 918 488 213 0 21 chr13 43660293 43660342 -76623970 - MTEa LTR MaLR -277 102 54 3 918 1087 151 124 15 chr13 43660342 43660544 -76623768 + URR1A DNA MER1_type 1 224 -2 3 918 488 213 0 21 chr13 43660544 43660590 -76623722 - MTEa LTR MaLR -326 53 9 3 918 251 356 37 0 chr13 43661466 43661601 -76622711 + RMER12 LTR ERVK 696 835 -487 3 918 396 283 32 61 chr13 43661545 43661735 -76622577 - B4 SINE B4 0 292 117 3 918 183 80 0 0 chr13 43662061 43662086 -76622226 + (GAAA)n Simple_repeat Simple_repeat 1 25 0 3 918 227 220 40 0 chr13 43662239 43662289 -76622023 - B4 SINE B4 -240 52 1 3 918 273 290 109 38 chr13 43662308 43662491 -76621821 - MLT1J1 LTR MaLR -17 593 398 3 918 205 152 0 0 chr13 43662548 43662581 -76621731 + G-rich Low_complexity Low_complexity 1 33 0 3 918 530 179 16 93 chr13 43662583 43662712 -76621600 - B3A SINE B2 -45 153 35 3 918 279 350 10 20 chr13 43662898 43663000 -76621312 - MLT1J1 LTR MaLR -304 140 40 3 918 504 297 3 0 chr13 43663196 43663312 -76621000 - PB1D10 SINE Alu 0 117 1 3 918 525 248 35 0 chr13 43663319 43663464 -76620848 + B1_Mur4 SINE Alu 1 150 0 3 918 314 254 78 54 chr13 43663616 43663745 -76620567 - MTEa LTR MaLR -8 371 240 3 918 540 299 76 14 chr13 43664386 43664596 -76619716 + MLT1F1 LTR MaLR 345 567 -2 3 918 306 280 163 22 chr13 43664692 43664827 -76619485 - HAL1-3A_ME LINE L1 -421 2437 2284 3 918 389 247 21 0 chr13 43664855 43664952 -76619360 - PB1D10 SINE Alu -2 115 17 3 918 511 313 82 17 chr13 43664957 43665309 -76619003 - Zaphod2 DNA Tip100 -2728 796 512 3 918 2180 112 16 0 chr13 43665570 43665884 -76618428 - ORR1A2 LTR MaLR -8 319 1 3 918 2207 169 28 67 chr13 43666009 43666440 -76617872 + MTD LTR MaLR 4 417 -2 3 918 393 232 60 10 chr13 43666486 43666586 -76617726 - PB1D7 SINE Alu -2 118 14 3 918 360 316 10 0 chr13 43666512 43666610 -76617702 - ID_B1 SINE B4 -56 168 70 3 918 482 214 0 0 chr13 43666653 43666737 -76617575 + B3A SINE B2 68 151 -47 3 918 360 0 0 0 chr13 43666743 43666783 -76617529 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 918 410 319 64 38 chr13 43666908 43667143 -76617169 - MER74A LTR ERVL -216 342 102 3 918 262 269 200 43 chr13 43667172 43667312 -76617000 - RSINE1 SINE B4 0 165 4 3 918 315 296 0 57 chr13 43667774 43667896 -76616416 - MER74A LTR ERVL -434 124 10 3 918 725 242 0 0 chr13 43668129 43668278 -76616034 + B1_Mur1 SINE Alu 1 149 0 3 918 183 80 0 0 chr13 43668281 43668306 -76616006 + (GGA)n Simple_repeat Simple_repeat 3 27 0 3 918 409 193 24 0 chr13 43668403 43668486 -76615826 + B4 SINE B4 191 275 -17 3 918 243 281 16 0 chr13 43668519 43668583 -76615729 - ID4_ SINE ID -6 77 13 3 918 459 66 13 26 chr13 43669007 43669085 -76615227 + (TTCTC)n Simple_repeat Simple_repeat 4 80 0 3 918 445 16 32 0 chr13 43669138 43669200 -76615112 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 3 918 1091 95 0 0 chr13 43669200 43669337 -76614975 - B1_Mus1 SINE Alu -10 138 2 3 918 297 109 0 0 chr13 43669684 43669739 -76614573 + (T)n Simple_repeat Simple_repeat 1 55 0 3 918 347 233 34 23 chr13 43670158 43670246 -76614066 - ORR1E LTR MaLR -267 92 4 3 918 476 281 18 30 chr13 43670337 43670502 -76613810 + ORR1E LTR MaLR 1 163 -196 3 918 758 219 53 6 chr13 43670651 43670821 -76613491 - B3 SINE B2 -13 203 26 3 918 283 303 0 0 chr13 43671258 43671334 -76612978 + MIR SINE MIR 94 169 -93 3 918 27 29 0 0 chr13 43671525 43671559 -76612753 + AT_rich Low_complexity Low_complexity 1 34 0 3 918 360 238 54 54 chr13 43671842 43671953 -76612359 - PB1D10 SINE Alu -2 115 5 3 918 21 36 0 0 chr13 43671967 43671995 -76612317 + AT_rich Low_complexity Low_complexity 1 28 0 3 918 186 43 0 0 chr13 43672034 43672057 -76612255 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 918 414 0 0 0 chr13 43672057 43672102 -76612210 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 918 458 278 16 8 chr13 43672121 43672248 -76612064 - RSINE1 SINE B4 -35 130 3 3 918 486 204 0 0 chr13 43672409 43672512 -76611800 + CT-rich Low_complexity Low_complexity 3 105 0 3 918 757 227 100 109 chr13 43672556 43672729 -76611583 - L1M3 LINE L1 -409 5774 5602 3 918 934 249 9 14 chr13 43672729 43672945 -76611367 - B3 SINE B2 -1 215 1 3 918 757 227 100 109 chr13 43672945 43673102 -76611210 - L1M3 LINE L1 -582 5601 5447 3 918 346 306 32 8 chr13 43673176 43673301 -76611011 - B4A SINE B4 -4 288 161 3 918 265 253 27 0 chr13 43673904 43673979 -76610333 - ID_B1 SINE B4 -3 221 145 3 918 413 282 126 78 chr13 43673986 43674048 -76610264 - B4 SINE B4 -4 288 213 3 918 234 62 0 0 chr13 43674048 43674080 -76610232 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 918 540 249 52 77 chr13 43674080 43674129 -76610183 - ID_B1 SINE B4 -80 212 164 3 918 504 0 0 0 chr13 43674129 43674185 -76610127 + (TTTTA)n Simple_repeat Simple_repeat 2 57 0 3 918 1015 199 5 10 chr13 43674185 43674388 -76609924 - B3 SINE B2 -13 203 2 3 918 540 251 55 77 chr13 43674388 43674543 -76609769 - ID_B1 SINE B4 -57 167 8 3 918 639 290 32 14 chr13 43674566 43674786 -76609526 - B4 SINE B4 -64 228 5 4 918 246 284 122 36 chr13 43674790 43674929 -76609383 - ID_B1 SINE B4 -66 158 8 4 918 317 303 22 0 chr13 43675934 43676023 -76608289 + B3A SINE B2 2 92 -106 4 918 704 188 7 0 chr13 43676193 43676331 -76607981 + B1_Mur2 SINE Alu 2 140 -9 4 918 1342 153 88 197 chr13 43676484 43676915 -76607397 + ORR1C2 LTR MaLR 1 384 0 4 918 402 226 175 10 chr13 43677135 43677238 -76607074 + PB1D7 SINE Alu 1 120 0 4 918 278 115 16 0 chr13 43677239 43677300 -76607012 + (CAAAAA)n Simple_repeat Simple_repeat 3 64 0 4 918 1280 77 53 32 chr13 43677305 43677494 -76606818 + B2_Mm2 SINE B2 2 194 -1 4 918 307 217 58 0 chr13 43677607 43677676 -76606636 + B1F1 SINE Alu 6 78 -71 4 918 328 263 8 58 chr13 43678004 43678125 -76606187 - Tigger7 DNA MER2_type -2026 465 351 4 918 254 330 0 9 chr13 43678287 43678397 -76605915 + (TG)n Simple_repeat Simple_repeat 1 109 0 4 918 240 184 0 0 chr13 43678416 43678465 -76605847 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 918 494 326 0 0 chr13 43679538 43679673 -76604639 - ID_B1 SINE B4 0 224 90 4 918 214 296 127 0 chr13 43679673 43679744 -76604568 - MIRb SINE MIR -46 222 143 4 918 183 204 0 0 chr13 43679753 43679802 -76604510 + (CAT)n Simple_repeat Simple_repeat 1 49 0 4 918 532 141 14 14 chr13 43680609 43680753 -76603559 + (TCTCTG)n Simple_repeat Simple_repeat 6 149 0 4 918 324 298 10 0 chr13 43680847 43680951 -76603361 - MLT1B LTR MaLR 0 390 286 4 918 1105 191 5 9 chr13 43680951 43681163 -76603149 + B3 SINE B2 2 212 -4 4 918 267 321 38 0 chr13 43681212 43681318 -76602994 - MLT1B LTR MaLR -91 299 190 4 918 571 313 58 55 chr13 43681343 43681691 -76602621 - ORR1E LTR MaLR -6 353 5 4 918 270 0 0 0 chr13 43681772 43681802 -76602510 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 4 918 287 182 0 35 chr13 43681820 43681877 -76602435 - B2_Mm2 SINE B2 -94 101 47 4 918 1237 87 35 6 chr13 43681924 43682098 -76602214 - B2_Mm1t SINE B2 -14 179 1 4 918 314 235 0 24 chr13 43682098 43682181 -76602131 - MLT1B LTR MaLR -264 126 46 4 918 1396 191 134 21 chr13 43682184 43682520 -76601792 - ORR1D1 LTR MaLR 0 374 1 4 918 926 182 11 14 chr13 43682633 43682943 -76601369 + CT-rich Low_complexity Low_complexity 1 309 0 4 918 256 29 57 0 chr13 43682943 43682978 -76601334 + (TCCC)n Simple_repeat Simple_repeat 1 37 0 4 918 655 168 0 21 chr13 43682978 43683118 -76601194 + CT-rich Low_complexity Low_complexity 3 139 0 4 918 522 46 0 0 chr13 43684207 43684272 -76600040 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 918 306 261 138 36 chr13 43684431 43684598 -76599714 - MTEb LTR MaLR -1 378 195 4 918 1816 92 112 30 chr13 43685309 43685613 -76598699 + L1_Mus3 LINE L1 6310 6638 0 4 918 253 340 10 25 chr13 43685691 43685890 -76598422 - L1MA7 LINE L1 -15 6276 6081 4 918 347 233 22 17 chr13 43686801 43686904 -76597408 + B4A SINE B4 128 227 -65 4 918 612 81 0 0 chr13 43688612 43688699 -76595613 + (TCCC)n Simple_repeat Simple_repeat 3 89 0 4 918 1120 234 22 19 chr13 43688812 43689082 -76595230 + Lx8 LINE L1 6412 6682 -791 4 918 266 75 0 81 chr13 43689093 43689180 -76595132 + A-rich Low_complexity Low_complexity 2 81 0 4 918 509 73 324 9 chr13 43689242 43689353 -76594959 - B2_Mm2 SINE B2 0 195 50 4 918 1379 57 11 28 chr13 43689412 43689593 -76594719 - B2_Mm1t SINE B2 -14 179 2 4 918 377 206 130 9 chr13 43689595 43689703 -76594609 + Lx8 LINE L1 6753 6873 -600 4 918 601 229 8 0 chr13 43689792 43689910 -76594402 + Lx8 LINE L1 7202 7320 -153 4 918 239 213 36 36 chr13 43689941 43690053 -76594259 + (TTATA)n Simple_repeat Simple_repeat 5 116 0 4 918 231 181 68 27 chr13 43690054 43690128 -76594184 + Lx8 LINE L1 7395 7471 -2 4 918 763 145 43 21 chr13 43690323 43690464 -76593848 - B1_Mur1 SINE Alu -1 148 5 4 918 477 206 0 0 chr13 43690509 43690616 -76593696 + (TCCA)n Simple_repeat Simple_repeat 4 110 0 4 918 272 354 0 0 chr13 43690623 43690705 -76593607 - B1F SINE Alu -54 95 14 4 918 21 36 0 0 chr13 43692011 43692039 -76592273 + AT_rich Low_complexity Low_complexity 1 28 0 4 918 926 239 25 10 chr13 43692039 43692238 -76592074 - B3 SINE B2 -14 202 1 4 918 1523 44 6 6 chr13 43692261 43692444 -76591868 - B2_Mm2 SINE B2 -9 186 4 4 918 460 298 98 34 chr13 43692753 43693048 -76591264 + MTEb LTR MaLR 62 375 -4 4 918 761 297 88 0 chr13 43693420 43693669 -76590643 + L1MB8 LINE L1 5484 5754 -424 4 918 638 312 64 23 chr13 43693682 43693902 -76590410 + B4A SINE B4 24 252 -40 4 918 889 282 45 52 chr13 43693950 43694332 -76589980 + L1MB8 LINE L1 5784 6162 -16 4 918 233 332 30 119 chr13 43694395 43694631 -76589681 - MIR SINE MIR -34 228 14 4 918 22 0 0 0 chr13 43694859 43694881 -76589431 + AT_rich Low_complexity Low_complexity 1 22 0 4 918 1001 248 46 82 chr13 43695161 43695464 -76588848 + B4A SINE B4 1 292 0 4 918 636 228 0 0 chr13 43695464 43695635 -76588677 + (CA)n Simple_repeat Simple_repeat 1 171 0 4 918 204 200 0 0 chr13 43695658 43695708 -76588604 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 918 182 37 0 36 chr13 43698197 43698225 -76586087 + (GGGTG)n Simple_repeat Simple_repeat 2 28 0 4 918 308 278 60 77 chr13 43700429 43700612 -76583700 + MLT1A1 LTR MaLR 23 202 -206 4 918 180 0 0 0 chr13 43700625 43700645 -76583667 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 918 414 248 19 9 chr13 43700663 43700769 -76583543 + MLT1A1 LTR MaLR 299 405 -3 4 918 931 304 79 9 chr13 43700875 43701217 -76583095 + MTEa LTR MaLR 1 366 -13 4 918 288 0 0 0 chr13 43701855 43701887 -76582425 + (T)n Simple_repeat Simple_repeat 1 32 0 4 918 370 295 85 128 chr13 43701929 43702295 -76582017 - ORR1E LTR MaLR -2 357 8 4 918 201 163 0 0 chr13 43702967 43703016 -76581296 + CT-rich Low_complexity Low_complexity 2 50 0 4 918 1038 228 28 20 chr13 43703043 43703294 -76581018 - B4A SINE B4 -28 264 12 4 918 1241 41 0 0 chr13 43703357 43703504 -76580808 - B1_Mus2 SINE Alu 0 147 1 4 918 21 0 0 0 chr13 43704226 43704247 -76580065 + AT_rich Low_complexity Low_complexity 1 21 0 4 918 437 280 39 16 chr13 43704313 43704440 -76579872 - RSINE1 SINE B4 -10 155 26 4 918 456 207 118 30 chr13 43705003 43705172 -76579140 - CYRA11_Mm Unknown Y-chromosome -262 355 172 4 918 835 135 14 0 chr13 43705032 43705173 -76579139 + URR1B DNA MER1_type 83 225 0 4 918 478 214 0 37 chr13 43705571 43705678 -76578634 - B1F SINE Alu -21 128 26 4 918 942 96 0 29 chr13 43705687 43705826 -76578486 + B1_Mur4 SINE Alu 2 136 -14 4 918 198 0 0 0 chr13 43705826 43705848 -76578464 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 4 918 550 230 109 31 chr13 43705929 43706185 -76578127 - MER33 DNA MER1_type -41 283 8 4 918 1991 191 72 11 chr13 43706287 43706759 -76577553 - MT2A LTR ERVL -17 516 16 4 918 435 304 58 0 chr13 43706636 43706774 -76577538 - MTE2b LTR MaLR -233 146 1 4 918 789 225 5 45 chr13 43706808 43706856 -76577456 - B3A SINE B2 -6 192 149 4 918 234 0 0 0 chr13 43706856 43706882 -76577430 + (TC)n Simple_repeat Simple_repeat 2 27 0 4 918 252 0 0 0 chr13 43706882 43706909 -76577403 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 918 789 225 5 45 chr13 43706909 43707059 -76577253 - B3A SINE B2 -50 148 2 4 918 1923 227 139 42 chr13 43707282 43708157 -76576155 + RCHARR1 DNA MER1_type 1 960 -14 4 918 1653 47 0 0 chr13 43709118 43709311 -76575001 - B2_Mm1a SINE B2 0 193 1 4 918 38 0 0 0 chr13 43709485 43709523 -76574789 + AT_rich Low_complexity Low_complexity 1 38 0 4 918 423 0 0 0 chr13 43709810 43709857 -76574455 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 918 1045 80 0 0 chr13 43709859 43709997 -76574315 - B1_Mus1 SINE Alu -6 142 5 4 918 21 0 0 0 chr13 43710009 43710030 -76574282 + AT_rich Low_complexity Low_complexity 1 21 0 4 918 261 57 0 0 chr13 43710788 43710823 -76573489 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 918 238 68 44 22 chr13 43711818 43711863 -76572449 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 4 918 186 209 0 0 chr13 43715756 43715799 -76568513 + (CAAT)n Simple_repeat Simple_repeat 2 44 0 4 918 249 312 17 67 chr13 43715807 43715927 -76568385 - MIRb SINE MIR -33 235 122 4 918 208 119 0 45 chr13 43715950 43715994 -76568318 + T-rich Low_complexity Low_complexity 3 44 0 4 918 332 229 6 171 chr13 43716330 43716488 -76567824 + B1F SINE Alu 1 132 -17 4 918 246 95 0 0 chr13 43716544 43716586 -76567726 + (CAAT)n Simple_repeat Simple_repeat 2 43 0 4 918 192 367 0 0 chr13 43717255 43717334 -76566978 - MIRb SINE MIR -9 259 181 4 918 8570 32 1 4 chr13 43717335 43718475 -76565837 - L1Md_F2 LINE L1 0 6582 5447 4 918 965 147 0 6 chr13 43718802 43718973 -76565339 + GA-rich Low_complexity Low_complexity 2 171 0 4 918 1243 142 57 24 chr13 43718979 43719188 -76565124 + B3 SINE B2 1 216 0 4 918 217 276 73 21 chr13 43719536 43719647 -76564665 + MIRb SINE MIR 18 132 -130 4 918 1926 259 49 59 chr13 43719669 43720502 -76563810 + L1_Rod LINE L1 3801 4625 -1222 4 918 7816 76 23 5 chr13 43720600 43722310 -76562002 - L1VL2 LINE L1 -1586 2029 285 4 918 887 268 104 34 chr13 43722328 43722656 -76561656 + MLT1A0 LTR MaLR 1 351 -14 4 918 1323 171 19 0 chr13 43723328 43723539 -76560773 - B3 SINE B2 0 216 2 4 918 391 223 175 26 chr13 43723877 43724066 -76560246 - Charlie5 DNA MER1_type -34 2590 2374 4 918 417 316 6 12 chr13 43724083 43724243 -76560069 - Charlie5 DNA MER1_type -2429 195 37 4 918 273 349 48 55 chr13 43724903 43725215 -76559097 + L2b LINE L2 1813 2122 -1297 4 918 2404 77 48 0 chr13 43725801 43726113 -76558199 + ORR1A2 LTR MaLR 1 327 0 4 918 182 370 37 7 chr13 43726605 43726741 -76557571 + L2b LINE L2 2648 2787 -632 4 918 196 319 0 0 chr13 43726975 43727022 -76557290 + L2b LINE L2 3248 3294 -81 4 918 278 297 0 13 chr13 43727241 43727316 -76556996 - ID4_ SINE ID -2 81 8 4 918 520 255 37 12 chr13 43727449 43727612 -76556700 - B4A SINE B4 -124 168 2 4 918 1101 206 5 5 chr13 43729047 43729262 -76555050 + B3 SINE B2 2 216 0 4 918 241 206 6 30 chr13 43729288 43729362 -76554950 - L1ME3A LINE L1 -202 5971 5899 4 918 414 0 0 0 chr13 43729447 43729493 -76554819 + (TC)n Simple_repeat Simple_repeat 1 46 0 5 918 369 0 0 0 chr13 43729493 43729533 -76554779 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 918 362 271 10 0 chr13 43729533 43729629 -76554683 - PB1D10 SINE Alu -12 105 9 5 918 525 304 162 16 chr13 43729886 43730157 -76554155 - L1MEg LINE L1 -867 5279 4983 5 918 207 0 0 0 chr13 43730157 43730180 -76554132 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 918 525 304 162 16 chr13 43730180 43730469 -76553843 - L1MEg LINE L1 -1164 4982 4637 5 918 531 66 0 0 chr13 43730474 43730550 -76553762 + (CA)n Simple_repeat Simple_repeat 2 77 0 5 918 221 0 0 33 chr13 43731980 43732010 -76552302 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 918 316 266 204 51 chr13 43732073 43732426 -76551886 - L1MEg LINE L1 -3556 2590 2184 5 918 249 260 45 45 chr13 43732909 43733042 -76551270 - L1MEg LINE L1 -4652 1590 1424 5 918 466 302 116 20 chr13 43733105 43733510 -76550802 - L1MEg LINE L1 -4785 1457 1014 5 918 799 321 89 7 chr13 43733761 43733808 -76550504 - L1ME1 LINE L1 -235 6804 6757 5 918 228 86 0 0 chr13 43733808 43733843 -76550469 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 918 799 321 89 7 chr13 43733843 43734209 -76550103 - L1ME1 LINE L1 -283 6756 6358 5 918 462 303 74 57 chr13 43734418 43734701 -76549611 - B4A SINE B4 -3 289 2 5 918 317 254 50 14 chr13 43734720 43734860 -76549452 - L1ME1 LINE L1 -747 6297 6153 5 918 378 115 0 0 chr13 43734863 43734924 -76549388 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 918 593 233 25 0 chr13 43734935 43735055 -76549257 - RSINE1 SINE B4 -38 127 5 5 918 343 323 105 102 chr13 43735058 43735469 -76548843 - L1ME1 LINE L1 -853 6153 5716 5 918 1419 62 6 0 chr13 43735469 43735647 -76548665 + B2_Mm1a SINE B2 1 179 -14 5 918 1403 77 6 0 chr13 43735647 43735830 -76548482 + B2_Mm1a SINE B2 1 184 -9 5 918 343 323 105 102 chr13 43735830 43735890 -76548422 - L1ME1 LINE L1 -1291 5715 5672 5 918 387 0 0 0 chr13 43735890 43735933 -76548379 + (TCCA)n Simple_repeat Simple_repeat 3 45 0 5 918 343 323 105 102 chr13 43735933 43737301 -76547011 - L1ME1 LINE L1 -1335 5671 4307 5 918 376 123 27 0 chr13 43737319 43737392 -76546920 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 918 418 296 196 36 chr13 43737523 43737878 -76546434 - L1ME1 LINE L1 -2975 4031 3633 5 918 464 185 210 0 chr13 43737878 43737997 -76546315 - B1F2 SINE Alu -5 144 1 5 918 418 284 188 34 chr13 43737997 43738712 -76545600 - L1ME1 LINE L1 -3374 3632 2784 5 918 522 287 143 16 chr13 43738764 43739004 -76545308 - L1ME1 LINE L1 -4919 2183 1759 5 918 545 217 32 71 chr13 43739004 43739158 -76545154 - B1_Mur3 SINE Alu 0 149 2 5 918 522 320 85 67 chr13 43739158 43739438 -76544874 - L1ME1 LINE L1 -5576 1758 1453 5 918 991 112 0 27 chr13 43739438 43739585 -76544727 - B1_Mus2 SINE Alu -2 145 3 5 918 522 320 85 67 chr13 43739585 43739699 -76544613 - L1ME1 LINE L1 -5882 1452 1351 5 918 602 300 127 11 chr13 43739699 43740055 -76544257 + Lx8 LINE L1 5731 6153 -1320 5 918 309 231 25 37 chr13 43740132 43740213 -76544099 - ID4_ SINE ID 0 83 4 5 918 376 267 131 21 chr13 43740307 43740344 -76543968 - L1MEg LINE L1 -5253 831 795 5 918 567 43 0 0 chr13 43740344 43740414 -76543898 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 918 376 267 131 21 chr13 43740414 43740567 -76543745 - L1MEg LINE L1 -5290 794 620 5 918 342 226 35 0 chr13 43740588 43740703 -76543609 + CT-rich Low_complexity Low_complexity 2 120 0 5 918 898 99 13 13 chr13 43740713 43740866 -76543446 + (TCCC)n Simple_repeat Simple_repeat 3 155 0 5 918 486 284 9 0 chr13 43740876 43740985 -76543327 - PB1D10 SINE Alu -5 112 3 5 918 304 227 11 33 chr13 43740997 43741088 -76543224 - B1_Mur4 SINE Alu -1 149 61 5 918 262 378 49 15 chr13 43741174 43741378 -76542934 - L1MEg LINE L1 -5636 448 238 5 918 370 143 15 5 chr13 43741599 43741708 -76542604 - B2_Mm2 SINE B2 -5 190 47 5 918 1016 93 0 7 chr13 43741731 43741883 -76542429 - B2_Mm2 SINE B2 -44 151 1 5 918 363 44 0 0 chr13 43741945 43741990 -76542322 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 918 304 220 0 0 chr13 43742010 43742069 -76542243 - ID4_ SINE ID -22 61 3 5 918 415 244 68 48 chr13 43742145 43742377 -76541935 - MER67A LTR ERV1 -309 234 15 5 918 212 380 38 12 chr13 43742503 43742663 -76541649 - MIRb SINE MIR -81 187 24 5 918 283 157 20 0 chr13 43742889 43742940 -76541372 - MIR SINE MIR -66 142 91 5 918 213 344 0 0 chr13 43743308 43743369 -76540943 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 918 808 295 49 21 chr13 43743372 43743656 -76540656 - B4A SINE B4 0 292 1 5 918 324 236 0 41 chr13 43744324 43744421 -76539891 + C-rich Low_complexity Low_complexity 3 95 0 5 918 739 273 37 52 chr13 43744625 43744953 -76539359 - L1MC5 LINE L1 -30 7931 7609 5 918 527 259 96 66 chr13 43745719 43745917 -76538395 - B4A SINE B4 0 292 89 5 918 396 181 0 0 chr13 43745932 43746015 -76538297 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 918 223 306 14 0 chr13 43746017 43746089 -76538223 - B4 SINE B4 -218 74 2 5 918 185 163 20 0 chr13 43746195 43746244 -76538068 + G-rich Low_complexity Low_complexity 2 51 0 5 918 358 19 36 18 chr13 43747090 43747145 -76537167 + (CAGCT)n Simple_repeat Simple_repeat 1 56 0 5 918 216 0 0 0 chr13 43747444 43747468 -76536844 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 5 918 544 243 29 0 chr13 43747563 43747699 -76536613 + RSINE1 SINE B4 5 144 -21 5 918 235 173 19 37 chr13 43747908 43747962 -76536350 + PB1 SINE Alu 72 124 -3 5 918 189 0 0 0 chr13 43748917 43748938 -76535374 + (T)n Simple_repeat Simple_repeat 1 21 0 5 918 316 330 147 23 chr13 43749149 43749267 -76535045 - Lx9 LINE L1 -27 7617 7459 5 918 387 0 0 0 chr13 43749267 43749310 -76535002 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 918 316 330 147 23 chr13 43749310 43749498 -76534814 - Lx9 LINE L1 -186 7458 7274 5 918 939 18 0 0 chr13 43750135 43750244 -76534068 + (TTCTC)n Simple_repeat Simple_repeat 5 113 0 5 918 977 68 83 0 chr13 43750313 43750446 -76533866 + B1_Mus2 SINE Alu 2 145 -2 5 918 1186 52 0 0 chr13 43750449 43750602 -76533710 + B2_Mm1a SINE B2 1 153 -40 5 918 374 39 19 0 chr13 43750602 43750654 -76533658 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 918 381 123 0 0 chr13 43750717 43750782 -76533530 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 918 1758 186 62 8 chr13 43750991 43751189 -76533123 - ORR1D1 LTR MaLR 0 374 177 5 918 582 15 0 0 chr13 43751189 43751256 -76533056 + (GA)n Simple_repeat Simple_repeat 2 68 0 5 918 1758 186 62 8 chr13 43751256 43751410 -76532902 - ORR1D1 LTR MaLR -198 176 4 5 918 383 0 21 0 chr13 43751664 43751711 -76532601 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 918 234 0 0 0 chr13 43751711 43751736 -76532576 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 918 264 292 76 50 chr13 43751743 43751862 -76532450 - B4A SINE B4 -27 265 144 5 918 1803 152 83 19 chr13 43753888 43754251 -76530061 + ORR1B1 LTR MaLR 1 386 -8 5 918 592 168 16 0 chr13 43754508 43754633 -76529679 + (TG)n Simple_repeat Simple_repeat 1 127 0 5 918 379 314 71 63 chr13 43754634 43754886 -76529426 - B4A SINE B4 -1 291 38 5 918 803 194 193 6 chr13 43755064 43755228 -76529084 + B3 SINE B2 2 199 -17 5 918 1191 34 0 52 chr13 43755228 43755383 -76528929 + B1_Mm SINE Alu 1 147 0 5 918 803 194 193 6 chr13 43755383 43755399 -76528913 + B3 SINE B2 200 215 -1 5 918 245 197 16 0 chr13 43755859 43755920 -76528392 + CT-rich Low_complexity Low_complexity 3 64 0 5 918 212 111 0 22 chr13 43755955 43756001 -76528311 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 5 918 4599 153 83 39 chr13 43756075 43756939 -76527373 - RMER19B LTR ERVK 0 902 1 5 918 384 236 0 0 chr13 43758919 43758991 -76525321 - tRNA-Gln-CAA tRNA tRNA -3 72 1 5 918 23 0 0 0 chr13 43759199 43759222 -76525090 + AT_rich Low_complexity Low_complexity 1 23 0 5 918 1709 16 0 15 chr13 43759408 43759604 -76524708 + B2_Mm1t SINE B2 1 193 0 5 918 227 246 35 0 chr13 43759614 43759671 -76524641 + ID4 SINE ID 1 59 -24 5 918 508 189 14 0 chr13 43759674 43759822 -76524490 + (CA)n Simple_repeat Simple_repeat 2 151 0 5 918 290 148 25 0 chr13 43759856 43759937 -76524375 + (TCTG)n Simple_repeat Simple_repeat 2 84 0 5 918 817 165 0 0 chr13 43760532 43760665 -76523647 + B1_Mur2 SINE Alu 1 133 -16 5 918 627 14 0 0 chr13 43762159 43762231 -76522081 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 918 416 230 35 69 chr13 43762497 43762642 -76521670 + B1F SINE Alu 1 140 -9 5 918 261 0 0 0 chr13 43762718 43762747 -76521565 + (T)n Simple_repeat Simple_repeat 1 29 0 5 918 210 158 0 0 chr13 43763086 43763124 -76521188 + T-rich Low_complexity Low_complexity 1 38 0 5 918 188 61 61 0 chr13 43764267 43764300 -76520012 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 5 918 630 224 267 0 chr13 43767378 43767539 -76516773 - B3 SINE B2 -9 207 4 5 918 246 95 0 0 chr13 43768237 43768279 -76516033 + (CAAAC)n Simple_repeat Simple_repeat 3 44 0 5 918 447 19 0 0 chr13 43769026 43769078 -76515234 + (TTA)n Simple_repeat Simple_repeat 3 54 0 5 918 363 78 0 0 chr13 43770561 43770612 -76513700 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 918 741 297 54 12 chr13 43770645 43770887 -76513425 - B4A SINE B4 -25 267 16 5 918 995 213 66 0 chr13 43770945 43771142 -76513170 - B3 SINE B2 -5 211 2 5 918 270 0 0 0 chr13 43771296 43771326 -76512986 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5 918 324 237 117 44 chr13 43771460 43771597 -76512715 - HAL1 LINE L1 -1605 902 756 5 918 202 271 0 0 chr13 43771705 43771753 -76512559 + GA-rich Low_complexity Low_complexity 2 49 0 5 918 1884 147 26 77 chr13 43772049 43772385 -76511927 + ORR1C2 LTR MaLR 1 343 -41 5 918 1121 96 0 0 chr13 43772385 43772531 -76511781 + B1_Mm SINE Alu 2 147 0 5 918 1884 147 26 77 chr13 43772531 43772585 -76511727 + ORR1C2 LTR MaLR 344 371 -13 5 918 229 322 1 35 chr13 43773565 43773663 -76510649 - MIRb SINE MIR 0 262 167 5 918 240 111 0 0 chr13 43773757 43773793 -76510519 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 918 1140 299 148 13 chr13 43774216 43774852 -76509460 - L1MC3 LINE L1 -180 7605 6884 5 918 876 259 83 3 chr13 43774962 43775276 -76509036 - L1MC LINE L1 -2260 3886 3548 5 918 1112 198 95 127 chr13 43775345 43775569 -76508743 - ORR1C2 LTR MaLR -24 360 171 5 918 432 0 0 0 chr13 43775569 43775617 -76508695 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 918 1112 198 95 127 chr13 43775617 43775762 -76508550 - ORR1C2 LTR MaLR -214 170 3 5 918 736 261 25 4 chr13 43775764 43775999 -76508313 + L1M3 LINE L1 4444 4683 -1457 5 918 318 250 18 27 chr13 43776001 43776112 -76508200 - RSINE1 SINE B4 -54 111 2 5 918 182 361 41 16 chr13 43776287 43776408 -76507904 - MIRb SINE MIR -86 182 59 5 114 2134 158 54 19 chr13 43777954 43778253 -76506059 + ORR1B1 LTR MaLR 1 317 -77 5 919 3599 18 2 0 chr13 43778253 43778648 -76505664 + MTA_Mm LTR MaLR 1 396 0 5 919 2134 158 54 19 chr13 43778648 43778721 -76505591 + ORR1B1 LTR MaLR 318 386 -8 5 919 375 268 6 201 chr13 43779023 43779182 -76505130 + RSINE1 SINE B4 4 131 -34 5 919 405 250 11 0 chr13 43779399 43779487 -76504825 + 5S rRNA rRNA 3 91 -30 6 919 350 319 76 83 chr13 43779528 43779685 -76504627 - MLT1I LTR MaLR -247 164 9 6 919 183 242 86 57 chr13 43780346 43780416 -76503896 - MIRb SINE MIR -179 89 18 6 919 1623 113 36 72 chr13 43780609 43780913 -76503399 + ORR1A2 LTR MaLR 33 325 -2 6 919 197 327 39 0 chr13 43780944 43780996 -76503316 + L3 LINE CR1 4410 4463 -26 6 919 485 277 225 58 chr13 43781012 43781244 -76503068 - MLT1C LTR MaLR -44 423 162 6 919 3045 150 25 42 chr13 43781244 43781815 -76502497 - RLTR31_Mm LTR ERVK 0 561 1 6 919 485 286 112 42 chr13 43781815 43781955 -76502357 - MLT1C LTR MaLR -306 161 3 6 919 637 240 73 39 chr13 43782185 43782389 -76501923 - B3 SINE B2 -5 211 1 6 919 442 264 165 55 chr13 43782470 43782634 -76501678 - B3A SINE B2 -16 182 1 6 919 207 100 0 0 chr13 43782823 43782853 -76501459 + (CCCCCA)n Simple_repeat Simple_repeat 4 33 0 6 919 616 225 62 62 chr13 43784027 43784221 -76500091 + B3A SINE B2 1 194 -4 6 919 688 232 0 0 chr13 43784281 43784419 -76499893 - B1_Mur1 SINE Alu 0 149 12 6 919 252 203 55 55 chr13 43784435 43784581 -76499731 + Zaphod DNA Tip100 711 856 -3175 6 919 229 243 65 39 chr13 43784609 43784686 -76499626 + ID4_ SINE ID 5 83 0 6 919 28 71 0 0 chr13 43784778 43784834 -76499478 + AT_rich Low_complexity Low_complexity 1 56 0 6 919 473 284 43 0 chr13 43785027 43785143 -76499169 + RSINE1 SINE B4 45 165 0 6 919 266 100 40 0 chr13 43786050 43786100 -76498212 + (TATG)n Simple_repeat Simple_repeat 2 53 0 6 919 405 0 0 0 chr13 43787591 43787636 -76496676 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 919 2118 167 56 23 chr13 43787657 43788049 -76496263 + MTD LTR MaLR 1 405 -14 6 919 396 303 90 0 chr13 43788135 43788257 -76496055 - B4 SINE B4 -75 217 85 6 919 277 266 5 0 chr13 43788353 43788420 -76495892 - MLT2B2 LTR ERVL -120 436 368 6 919 244 164 30 0 chr13 43788428 43788495 -76495817 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 919 309 278 224 45 chr13 43788514 43788825 -76495487 - MLT2B2 LTR ERVL -179 375 5 6 919 554 176 17 11 chr13 43789818 43789996 -76494316 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 919 279 239 0 43 chr13 43790021 43790091 -76494221 - ID4 SINE ID -16 67 1 6 919 501 62 0 0 chr13 43790182 43790247 -76494065 + (GA)n Simple_repeat Simple_repeat 1 65 0 6 919 780 248 55 15 chr13 43790980 43791181 -76493131 + B3 SINE B2 1 209 -7 6 919 1055 94 0 0 chr13 43791396 43791534 -76492778 - B1_Mm SINE Alu -5 142 5 6 919 197 234 16 0 chr13 43791846 43791910 -76492402 + (CCCTG)n Simple_repeat Simple_repeat 3 67 0 6 919 324 206 22 22 chr13 43791899 43792038 -76492274 + CT-rich Low_complexity Low_complexity 1 139 0 6 919 458 343 51 78 chr13 43792246 43792616 -76491696 - MLT1A0 LTR MaLR 0 365 6 6 919 303 203 0 0 chr13 43792814 43792878 -76491434 + CT-rich Low_complexity Low_complexity 1 64 0 6 919 440 325 101 66 chr13 43793077 43793197 -76491115 - LTR41B LTR ERVL 0 758 640 6 919 782 30 0 10 chr13 43793197 43793299 -76491013 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 6 919 440 325 101 66 chr13 43793299 43793435 -76490877 - LTR41B LTR ERVL -119 639 493 6 919 342 342 144 71 chr13 43793437 43793777 -76490535 + MLT1A1 LTR MaLR 1 408 0 6 919 1029 286 60 71 chr13 43795444 43795809 -76488503 - MLT1A0 LTR MaLR 0 365 5 6 919 2066 136 124 51 chr13 43795809 43796243 -76488069 + RMER4A LTR ERVK 1 466 0 6 919 238 325 60 82 chr13 43796253 43796387 -76487925 - MLT1K LTR MaLR -40 555 425 6 919 1163 159 62 14 chr13 43796584 43796794 -76487518 - URR1B DNA MER1_type -5 220 1 6 919 379 340 118 73 chr13 43796794 43797078 -76487234 - MLT1F2 LTR MaLR -71 489 177 6 919 4118 72 13 9 chr13 43797078 43797686 -76486626 + L1_Mus4 LINE L1 6076 6636 0 6 919 379 340 118 73 chr13 43797686 43797755 -76486557 - MLT1F2 LTR MaLR -384 176 120 6 919 388 246 164 0 chr13 43798441 43798551 -76485761 - B1F SINE Alu -1 148 21 6 919 864 221 64 37 chr13 43798562 43798750 -76485562 + B3 SINE B2 1 193 -23 6 919 270 0 0 0 chr13 43798756 43798786 -76485526 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 6 919 406 262 0 0 chr13 43799449 43799529 -76484783 - PB1D10 SINE Alu -37 80 1 6 919 328 244 0 79 chr13 43799469 43799542 -76484770 - B4A SINE B4 -147 145 79 6 919 306 0 0 0 chr13 43799542 43799576 -76484736 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 919 328 244 0 79 chr13 43799576 43799591 -76484721 - B4A SINE B4 -214 78 64 6 919 342 0 0 0 chr13 43799726 43799764 -76484548 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 919 419 18 0 0 chr13 43800343 43800400 -76483912 + L1Md_T LINE L1 6526 6582 0 6 919 710 173 35 14 chr13 43800430 43800571 -76483741 + B2_Mm2 SINE B2 35 178 -17 6 919 279 0 0 0 chr13 43800575 43800606 -76483706 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 919 207 0 0 0 chr13 43800606 43800628 -76483684 + (GA)n Simple_repeat Simple_repeat 2 24 0 6 919 337 258 100 31 chr13 43801200 43801360 -76482952 - MTEb LTR MaLR -14 365 195 6 919 513 71 0 0 chr13 43802142 43802212 -76482100 + (TCCCC)n Simple_repeat Simple_repeat 4 73 0 6 919 245 203 40 13 chr13 43802215 43802290 -76482022 + CT-rich Low_complexity Low_complexity 1 77 0 6 919 2115 139 121 10 chr13 43802644 43803059 -76481253 - Lx9 LINE L1 -1 7643 7183 6 919 211 304 0 0 chr13 43803430 43803486 -76480826 + C-rich Low_complexity Low_complexity 4 59 0 6 919 181 255 71 18 chr13 43803619 43803675 -76480637 - L3b LINE CR1 -264 218 160 6 919 225 0 0 0 chr13 43803851 43803876 -76480436 + (T)n Simple_repeat Simple_repeat 1 25 0 6 919 468 91 0 0 chr13 43804252 43804318 -76479994 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 6 919 714 291 47 77 chr13 43804412 43804710 -76479602 - B4 SINE B4 -2 290 2 6 919 1183 69 51 17 chr13 43805465 43805642 -76478670 + B2_Mm2 SINE B2 2 184 -11 6 919 210 37 0 0 chr13 43805643 43805670 -76478642 + (TAA)n Simple_repeat Simple_repeat 1 27 0 6 919 464 257 44 9 chr13 43805834 43805948 -76478364 + RSINE1 SINE B4 3 120 -45 6 919 382 310 108 69 chr13 43806574 43806933 -76477379 + MLT1C LTR MaLR 10 390 -77 6 919 387 158 8 38 chr13 43806933 43807065 -76477247 + (CA)n Simple_repeat Simple_repeat 1 128 0 6 919 233 247 65 52 chr13 43807308 43807385 -76476927 - L1MEg1 LINE L1 -5972 263 186 6 919 533 339 68 14 chr13 43807519 43807740 -76476572 + MER2 DNA MER2_type 1 233 -112 6 919 243 0 0 0 chr13 43808023 43808050 -76476262 + (CTG)n Simple_repeat Simple_repeat 3 29 0 6 919 477 0 0 0 chr13 43808050 43808103 -76476209 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 919 267 294 53 21 chr13 43809094 43809188 -76475124 - MTE2a LTR MaLR 0 379 283 6 919 1187 75 0 0 chr13 43809326 43809473 -76474839 - B1_Mus1 SINE Alu 0 148 2 6 919 530 15 15 0 chr13 43809475 43809542 -76474770 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 6 919 200 352 35 99 chr13 43810003 43810378 -76473934 - L2 LINE L2 -428 2991 2641 6 919 455 324 131 24 chr13 43810895 43811186 -76473126 + MLT1J2 LTR MaLR 3 324 -124 6 919 377 241 0 0 chr13 43811597 43811684 -76472628 + PB1D7 SINE Alu 34 120 0 6 919 339 181 0 0 chr13 43811708 43811780 -76472532 + GA-rich Low_complexity Low_complexity 1 72 0 6 919 708 244 173 13 chr13 43812486 43812723 -76471589 - B4A SINE B4 -16 276 2 6 919 279 189 33 22 chr13 43813092 43813171 -76471141 + (TTTG)n Simple_repeat Simple_repeat 3 82 0 6 919 1161 62 0 7 chr13 43813171 43813318 -76470994 - B1_Mus1 SINE Alu 0 148 3 6 919 279 189 33 22 chr13 43813318 43813330 -76470982 + (TTTG)n Simple_repeat Simple_repeat 2 14 0 6 919 230 0 33 0 chr13 43813526 43813556 -76470756 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 919 181 236 101 89 chr13 43813993 43814072 -76470240 + MIRm SINE MIR 96 175 -101 6 919 310 272 69 17 chr13 43814566 43814682 -76469630 + L1MEe LINE L1 703 824 -4030 6 919 375 121 0 0 chr13 43814682 43814740 -76469572 + (GA)n Simple_repeat Simple_repeat 1 58 0 6 919 26 0 0 0 chr13 43815956 43815982 -76468330 + AT_rich Low_complexity Low_complexity 1 26 0 6 919 563 223 46 0 chr13 43816007 43816137 -76468175 - RSINE1 SINE B4 -7 158 23 6 919 251 105 0 50 chr13 43816458 43816498 -76467814 - tRNA-Cys-TGY tRNA tRNA -34 41 4 6 919 267 31 0 0 chr13 43817597 43817629 -76466683 + (CAA)n Simple_repeat Simple_repeat 2 33 0 6 919 548 280 16 8 chr13 43817631 43817757 -76466555 + B1F1 SINE Alu 1 127 -22 6 919 267 316 229 12 chr13 43817763 43817933 -76466379 - LTR31 LTR ERV1 -265 354 148 6 919 2534 243 39 111 chr13 43817953 43818940 -76465372 + RMER17B LTR ERVK 1 915 -43 6 919 468 0 0 0 chr13 43819079 43819131 -76465181 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 919 615 27 0 0 chr13 43819131 43819203 -76465109 + (GA)n Simple_repeat Simple_repeat 1 73 0 6 919 676 255 25 6 chr13 43819226 43819388 -76464924 - B4 SINE B4 -48 244 80 6 919 466 170 0 0 chr13 43819413 43819501 -76464811 - B1_Mur2 SINE Alu -25 124 37 6 919 298 318 0 0 chr13 43819481 43819588 -76464724 - B4 SINE B4 -185 107 1 6 919 203 0 0 36 chr13 43820287 43820315 -76463997 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 6 919 1271 124 91 34 chr13 43820509 43820718 -76463594 + URR1B DNA MER1_type 5 225 0 6 919 405 292 37 44 chr13 43821511 43821537 -76462775 + B3 SINE B2 3 28 -188 6 919 216 0 0 0 chr13 43821537 43821561 -76462751 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6 919 405 291 36 104 chr13 43821561 43821685 -76462627 + B3 SINE B2 29 142 -53 6 919 182 118 0 29 chr13 43821685 43821720 -76462592 + (CATG)n Simple_repeat Simple_repeat 1 34 0 6 919 363 291 36 104 chr13 43821720 43821760 -76462552 + B2_Mm2 SINE B2 143 180 -15 6 919 423 160 0 0 chr13 43822939 43823014 -76461298 + CT-rich Low_complexity Low_complexity 4 78 0 7 919 508 271 17 0 chr13 43823017 43823135 -76461177 - B1F SINE Alu -8 141 22 7 919 248 122 41 0 chr13 43823259 43823308 -76461004 + C-rich Low_complexity Low_complexity 2 52 0 7 919 826 311 87 37 chr13 43823970 43824322 -76459990 - MTEa LTR MaLR -12 367 6 7 919 823 240 83 43 chr13 43824520 43824773 -76459539 - ORR1E LTR MaLR 0 359 97 7 919 1172 322 76 70 chr13 43825186 43826141 -76458171 - MER63C DNA AcHobo -15 915 5 7 919 488 176 11 0 chr13 43826463 43826554 -76457758 + Lx7 LINE L1 7605 7696 0 7 919 679 171 9 0 chr13 43826739 43826850 -76457462 + B1_Mus1 SINE Alu 35 146 -2 7 919 180 125 0 0 chr13 43826851 43826883 -76457429 + (CAAG)n Simple_repeat Simple_repeat 1 32 0 7 919 301 239 0 14 chr13 43827600 43827672 -76456640 + MER5A DNA MER1_type 4 74 -115 7 919 397 337 144 53 chr13 43827757 43828098 -76456214 + L1ME1 LINE L1 5754 6125 -54 7 919 447 35 0 0 chr13 43828114 43828171 -76456141 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 919 1038 240 68 9 chr13 43828275 43828603 -76455709 + ORR1E LTR MaLR 2 379 0 7 919 233 380 22 71 chr13 43828695 43828879 -76455433 + MER45A DNA Tip100 4 178 0 7 919 218 98 0 47 chr13 43829020 43829063 -76455249 + (TCTCTG)n Simple_repeat Simple_repeat 4 44 0 7 919 439 31 15 15 chr13 43829106 43829172 -76455140 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 7 919 896 212 18 35 chr13 43829172 43829343 -76454969 - B3 SINE B2 -47 169 2 7 919 423 0 0 0 chr13 43829357 43829404 -76454908 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 919 292 254 26 26 chr13 43829564 43829681 -76454631 + L1MC4 LINE L1 7795 7911 -131 7 919 199 202 77 132 chr13 43829850 43829941 -76454371 - L2c LINE L2 -300 3087 3002 7 919 211 296 108 27 chr13 43829945 43830056 -76454256 - L2c LINE L2 -560 2859 2740 7 919 287 265 62 20 chr13 43830543 43830669 -76453643 - MLT1A1 LTR MaLR -3 405 260 7 919 1015 252 39 47 chr13 43830730 43830762 -76453550 - B4A SINE B4 -14 278 252 7 919 2038 162 38 16 chr13 43830762 43831131 -76453181 + ORR1C1 LTR MaLR 1 377 -1 7 919 1015 252 39 47 chr13 43831131 43831377 -76452935 - B4A SINE B4 -41 251 2 7 919 376 291 78 39 chr13 43831377 43831528 -76452784 - MLT1A1 LTR MaLR -251 157 1 7 919 881 188 40 15 chr13 43831532 43831775 -76452537 + RMER19B LTR ERVK 1 192 -710 7 919 513 226 73 0 chr13 43832036 43832173 -76452139 + MLT1A0 LTR MaLR 1 147 -218 7 919 288 243 104 35 chr13 43832373 43832488 -76451824 + MLT1A0 LTR MaLR 236 358 -7 7 919 2121 192 8 8 chr13 43832717 43833103 -76451209 - MTD LTR MaLR -14 405 19 7 919 286 23 23 23 chr13 43833103 43833147 -76451165 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 7 919 389 294 32 0 chr13 43833175 43833301 -76451011 + MLT1A0-int LTR MaLR 485 614 -757 7 919 214 271 0 17 chr13 43833537 43833597 -76450715 - B1_Mur4 SINE Alu -1 149 91 7 919 297 0 0 0 chr13 43833963 43833996 -76450316 + (TATG)n Simple_repeat Simple_repeat 2 34 0 7 919 319 258 146 0 chr13 43834008 43834097 -76450215 - B3 SINE B2 -13 203 102 7 919 306 0 0 0 chr13 43834097 43834131 -76450181 + (CAA)n Simple_repeat Simple_repeat 1 34 0 7 919 21 0 0 0 chr13 43834723 43834744 -76449568 + AT_rich Low_complexity Low_complexity 1 21 0 7 919 441 152 0 0 chr13 43834884 43834989 -76449323 + GA-rich Low_complexity Low_complexity 1 105 0 7 919 1198 256 68 17 chr13 43835621 43835932 -76448380 - MTE2b LTR MaLR -36 343 42 7 919 243 262 11 35 chr13 43836025 43836112 -76448200 + (CATATA)n Simple_repeat Simple_repeat 2 86 0 7 919 373 234 3 46 chr13 43836113 43836209 -76448103 - B1F1 SINE Alu -15 135 40 7 919 230 239 14 0 chr13 43836639 43836710 -76447602 + (TA)n Simple_repeat Simple_repeat 1 72 0 7 919 396 302 128 62 chr13 43836739 43837031 -76447281 - MLT1A LTR MaLR -25 349 27 7 919 734 234 101 17 chr13 43838187 43838365 -76445947 - B3A SINE B2 -5 193 1 7 919 1095 30 8 0 chr13 43838408 43838542 -76445770 - B1_Mus1 SINE Alu -1 147 13 7 919 4747 197 258 9 chr13 43838546 43839231 -76445081 - Lx6 LINE L1 -4 7456 6607 7 919 3302 94 101 38 chr13 43839231 43839764 -76444548 + RMER2 LTR ERV1 1 567 0 7 919 14000 215 50 82 chr13 43839764 43841055 -76443257 - Lx6 LINE L1 -854 6606 5204 7 919 408 40 0 0 chr13 43841055 43841105 -76443207 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 919 14000 196 64 157 chr13 43841105 43844784 -76439528 - Lx6 LINE L1 -674 5203 2066 7 919 309 51 0 0 chr13 43844784 43844823 -76439489 + (TGG)n Simple_repeat Simple_repeat 3 41 0 7 919 14000 182 68 135 chr13 43844823 43845785 -76438527 - Lx6 LINE L1 -3812 2065 1127 7 919 463 250 92 25 chr13 43845805 43845924 -76438388 - B3 SINE B2 -30 186 60 7 919 216 143 0 0 chr13 43845924 43845966 -76438346 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 7 919 364 271 0 94 chr13 43846060 43846166 -76438146 + PB1 SINE Alu 5 100 -27 7 919 327 255 110 69 chr13 43846522 43846695 -76437617 + L1MB7 LINE L1 5962 6141 -43 7 919 1454 65 16 5 chr13 43847156 43847341 -76436971 - B2_Mm2 SINE B2 -4 191 5 7 919 236 383 18 30 chr13 43847399 43847566 -76436746 + RSINE1 SINE B4 1 165 0 7 919 26 30 0 0 chr13 43847566 43847599 -76436713 + AT_rich Low_complexity Low_complexity 1 33 0 7 919 222 161 0 0 chr13 43847615 43847646 -76436666 + PB1D7 SINE Alu 3 33 -87 7 919 536 291 152 48 chr13 43847880 43848190 -76436122 - MER57D LTR ERV1 -1 410 69 7 919 849 168 34 20 chr13 43848396 43848542 -76435770 - B1_Mur1 SINE Alu 0 149 2 7 919 295 273 18 92 chr13 43848814 43848923 -76435389 - MER5B DNA MER1_type -73 105 5 7 919 444 180 69 20 chr13 43849461 43849563 -76434749 - B1F2 SINE Alu -3 146 40 7 919 438 20 0 0 chr13 43849945 43849996 -76434316 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 919 210 71 0 0 chr13 43850457 43850485 -76433827 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 919 261 0 0 0 chr13 43850866 43850895 -76433417 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 919 2005 252 79 18 chr13 43850908 43851454 -76432858 - Lx8 LINE L1 -385 7088 6510 7 919 369 312 0 0 chr13 43852782 43853049 -76431263 + (TG)n Simple_repeat Simple_repeat 1 267 0 7 919 834 254 83 32 chr13 43853096 43853373 -76430939 - B4A SINE B4 0 292 2 7 919 225 185 0 53 chr13 43854156 43854213 -76430099 + (GAGTG)n Simple_repeat Simple_repeat 4 57 0 7 919 2102 161 26 18 chr13 43854465 43854856 -76429456 - ORR1B1 LTR MaLR 0 394 1 7 919 714 258 92 34 chr13 43855256 43855535 -76428777 - MLT1A0 LTR MaLR -2 465 68 7 919 1339 136 21 60 chr13 43855785 43856020 -76428292 - URR1A DNA MER1_type 0 226 1 7 919 231 289 12 35 chr13 43856077 43856163 -76428149 - MTEa LTR MaLR -17 362 279 7 919 420 265 0 0 chr13 43857274 43857357 -76426955 + PB1D7 SINE Alu 1 83 -37 7 919 962 121 7 14 chr13 43857365 43857661 -76426651 + (TCTA)n Simple_repeat Simple_repeat 1 293 0 7 919 750 101 0 0 chr13 43857666 43857775 -76426537 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 7 919 462 235 64 118 chr13 43857825 43858028 -76426284 - B3A SINE B2 -6 192 1 7 919 1123 71 0 0 chr13 43858954 43859094 -76425218 - B1_Mus1 SINE Alu -8 140 1 7 919 280 314 57 119 chr13 43859609 43860043 -76424269 - MLT1H LTR MaLR -13 476 29 7 919 362 303 9 9 chr13 43860058 43860096 -76424216 - HAL1-2a_MD LINE L1 -570 2454 2416 7 919 657 301 19 19 chr13 43860096 43860306 -76424006 + ID_B1 SINE B4 2 211 -13 7 919 362 303 9 9 chr13 43860306 43860377 -76423935 - HAL1-2a_MD LINE L1 -609 2415 2345 7 919 581 231 0 58 chr13 43861087 43861243 -76423069 + B1_Mur2 SINE Alu 2 148 -1 7 919 633 197 0 8 chr13 43861394 43861512 -76422800 + PB1D10 SINE Alu 1 117 0 7 919 747 96 48 6 chr13 43861662 43861830 -76422482 + (TG)n Simple_repeat Simple_repeat 2 176 0 7 919 531 216 18 0 chr13 43861887 43862054 -76422258 + (TG)n Simple_repeat Simple_repeat 2 171 0 7 919 354 217 287 94 chr13 43862057 43862301 -76422011 - B4 SINE B4 0 292 2 7 919 335 303 11 27 chr13 43862463 43862690 -76421622 + (CCCCAG)n Simple_repeat Simple_repeat 1 223 0 7 919 369 0 0 0 chr13 43863061 43863102 -76421210 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 919 414 0 0 0 chr13 43863102 43863147 -76421165 + (GA)n Simple_repeat Simple_repeat 1 46 0 7 919 656 206 16 23 chr13 43863637 43863766 -76420546 + B1_Mur1 SINE Alu 5 132 -17 7 919 681 270 136 8 chr13 43864353 43864603 -76419709 - RMER5 LTR ERV1 0 534 253 7 919 23 33 0 0 chr13 43864608 43864638 -76419674 + AT_rich Low_complexity Low_complexity 1 30 0 7 919 899 118 7 0 chr13 43864657 43864801 -76419511 + (TTTC)n Simple_repeat Simple_repeat 3 147 0 7 919 1171 69 0 0 chr13 43864807 43864951 -76419361 - B1_Mus1 SINE Alu -2 146 3 7 919 452 329 51 117 chr13 43864951 43865147 -76419165 - B3 SINE B2 -15 201 19 7 919 792 233 66 31 chr13 43865125 43865351 -76418961 - RMER5 LTR ERV1 -268 266 33 7 919 444 299 73 86 chr13 43865454 43865688 -76418624 + ORR1E LTR MaLR 1 232 -138 7 919 365 311 19 0 chr13 43865972 43866078 -76418234 + PB1D10 SINE Alu 3 110 -7 7 919 474 140 0 0 chr13 43866439 43866539 -76417773 + (CA)n Simple_repeat Simple_repeat 1 100 0 7 919 315 182 0 0 chr13 43866551 43866606 -76417706 + HAL1-3A_ME LINE L1 1975 2029 -829 7 919 256 298 57 9 chr13 43867268 43867373 -76416939 + ORR1E LTR MaLR 265 374 0 7 919 1123 257 7 35 chr13 43867836 43868118 -76416194 + B4 SINE B4 10 283 -9 7 919 919 277 65 14 chr13 43868914 43869192 -76415120 + B4A SINE B4 1 292 0 7 919 465 235 0 16 chr13 43869198 43869380 -76414932 + (CA)n Simple_repeat Simple_repeat 1 179 0 7 919 998 225 94 117 chr13 43870092 43870529 -76413783 + RMER10A LTR ERVL 3 429 -13 7 919 285 307 81 66 chr13 43870557 43870693 -76413619 + Charlie8 DNA MER1_type 191 328 -2100 7 919 249 296 0 47 chr13 43870811 43870896 -76413416 - MLT1A0 LTR MaLR -73 292 212 7 919 711 0 0 0 chr13 43870982 43871061 -76413251 + (TTTC)n Simple_repeat Simple_repeat 1 79 0 7 919 260 235 291 17 chr13 43871081 43871198 -76413114 - B1F SINE Alu 0 149 1 7 919 725 351 102 35 chr13 43871916 43872397 -76411915 + MER77 LTR ERVL 89 601 -6 8 919 341 212 192 70 chr13 43872762 43872934 -76411378 + B3A SINE B2 1 193 -5 8 919 900 143 164 60 chr13 43874104 43874305 -76410007 - URR1B DNA MER1_type -3 222 1 8 919 24 0 0 0 chr13 43874361 43874385 -76409927 + AT_rich Low_complexity Low_complexity 1 24 0 8 919 437 0 0 19 chr13 43874413 43874467 -76409845 + (CAAAA)n Simple_repeat Simple_repeat 2 54 0 8 919 4952 88 9 1 chr13 43874811 43875492 -76408820 - L1_Mus3 LINE L1 -1 6637 5952 8 919 227 295 147 0 chr13 43875656 43875751 -76408561 + L1MEd LINE L1 82 190 -5946 8 919 189 74 0 0 chr13 43876003 43876030 -76408282 + (TAA)n Simple_repeat Simple_repeat 3 29 0 8 919 268 243 69 122 chr13 43876085 43876216 -76408096 - YREP_Mm Unknown Unknown -1479 333 210 8 919 502 221 17 26 chr13 43876117 43876233 -76408079 + ID_B1 SINE B4 93 207 -17 8 919 491 0 17 0 chr13 43876242 43876301 -76408011 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 8 919 209 209 0 23 chr13 43876306 43876350 -76407962 + (TATG)n Simple_repeat Simple_repeat 4 46 0 8 919 383 333 52 36 chr13 43876351 43876544 -76407768 + L1MEd LINE L1 2444 2639 -3507 8 919 304 274 83 38 chr13 43876583 43876716 -76407596 + B4 SINE B4 1 139 -153 8 919 308 347 168 34 chr13 43876944 43877445 -76406867 + L1MEd LINE L1 4356 4923 -1223 8 919 376 335 84 37 chr13 43877643 43877916 -76406396 + L1MEd LINE L1 4993 5278 -868 8 919 218 192 77 0 chr13 43878281 43878333 -76405979 - B2_Mm2 SINE B2 -94 101 46 8 919 1130 112 47 0 chr13 43878389 43878559 -76405753 - B2_Mm1t SINE B2 -14 179 2 8 919 347 317 20 0 chr13 43879005 43879106 -76405206 + Lx8 LINE L1 7229 7331 -142 8 919 280 184 10 39 chr13 43879117 43879219 -76405093 + (TA)n Simple_repeat Simple_repeat 2 100 0 8 919 306 242 92 46 chr13 43879224 43879354 -76404958 + L1MCa LINE L1 1875 2010 -4498 8 919 818 273 171 0 chr13 43879710 43880032 -76404280 - Lx8 LINE L1 -153 7320 6944 8 919 21 0 0 0 chr13 43880486 43880507 -76403805 + GC_rich Low_complexity Low_complexity 1 21 0 8 919 202 56 56 0 chr13 43881761 43881797 -76402515 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 919 360 0 0 0 chr13 43882080 43882120 -76402192 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 919 198 348 43 64 chr13 43882228 43882369 -76401943 - MIR SINE MIR -6 256 119 8 919 198 191 0 0 chr13 43882372 43882414 -76401898 + G-rich Low_complexity Low_complexity 2 43 0 8 919 352 279 137 16 chr13 43882627 43882751 -76401561 + HAL1 LINE L1 880 1018 -1489 8 919 774 109 0 0 chr13 43882953 43883072 -76401240 + (TTTC)n Simple_repeat Simple_repeat 1 119 0 8 919 180 0 0 0 chr13 43883320 43883340 -76400972 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 8 919 401 0 20 0 chr13 43885047 43885096 -76399216 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 919 967 281 20 16 chr13 43885261 43885514 -76398798 + B4A SINE B4 7 260 -32 8 919 489 191 7 0 chr13 43886465 43886609 -76397703 + (CA)n Simple_repeat Simple_repeat 1 145 0 8 919 655 293 86 20 chr13 43887919 43888163 -76396149 - B4A SINE B4 -6 286 27 8 919 280 303 30 10 chr13 43888174 43888274 -76396038 - PB1D10 SINE Alu -15 102 1 8 919 27 0 0 0 chr13 43888657 43888684 -76395628 + AT_rich Low_complexity Low_complexity 1 27 0 8 919 1776 286 114 20 chr13 43889415 43889788 -76394524 + Tigger7 DNA MER2_type 8 392 -2099 8 919 306 0 0 0 chr13 43889788 43889822 -76394490 + (GA)n Simple_repeat Simple_repeat 2 35 0 8 919 1776 286 114 20 chr13 43889822 43889993 -76394319 + Tigger7 DNA MER2_type 393 603 -1888 8 919 184 179 71 0 chr13 43890410 43890466 -76393846 + (CATG)n Simple_repeat Simple_repeat 1 60 0 8 919 650 232 198 28 chr13 43890467 43890715 -76393597 - B4A SINE B4 -1 291 2 8 919 504 214 0 64 chr13 43891386 43891496 -76392816 - RMER30 DNA MER1_type -2 200 98 8 919 351 0 0 0 chr13 43891503 43891542 -76392770 + (TTG)n Simple_repeat Simple_repeat 1 39 0 8 919 481 247 101 184 chr13 43891719 43891997 -76392315 + B4 SINE B4 36 290 -2 8 919 186 43 0 0 chr13 43892407 43892430 -76391882 + (TTG)n Simple_repeat Simple_repeat 2 24 0 8 919 423 0 0 0 chr13 43893471 43893518 -76390794 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 919 237 364 114 21 chr13 43893807 43894043 -76390269 + MIRb SINE MIR 1 258 -4 8 919 744 324 5 29 chr13 43894414 43894624 -76389688 + ID_B1 SINE B4 19 223 -1 8 919 970 163 26 26 chr13 43896404 43896599 -76387713 + B2_Mm2 SINE B2 1 195 0 8 919 234 81 0 0 chr13 43899493 43899530 -76384782 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 8 919 227 115 0 37 chr13 43899548 43899602 -76384710 + (CAGAGA)n Simple_repeat Simple_repeat 3 54 0 8 919 347 0 0 23 chr13 43899827 43899871 -76384441 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 8 919 591 241 171 0 chr13 43900103 43900261 -76384051 + B3 SINE B2 1 185 -31 8 919 573 339 6 17 chr13 43900287 43900467 -76383845 - MTEa LTR MaLR -201 178 1 8 919 263 28 0 27 chr13 43901265 43901302 -76383010 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 8 919 660 227 14 0 chr13 43901308 43901449 -76382863 - RSINE1 SINE B4 -19 146 4 8 919 303 49 0 0 chr13 43901497 43901538 -76382774 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 8 919 263 242 65 0 chr13 43902791 43902853 -76381459 - AmnSINE1 SINE SINE -2 573 508 8 919 232 316 212 11 chr13 43903237 43903416 -76380896 - RMER15 LTR ERVL -17 558 344 8 919 783 309 89 67 chr13 43903676 43904124 -76380188 + MLT1C LTR MaLR 1 458 -9 8 919 281 314 41 33 chr13 43904446 43904568 -76379744 - MLT1C LTR MaLR -103 364 242 8 919 306 313 0 48 chr13 43904618 43904722 -76379590 - B3A SINE B2 -98 100 2 8 919 320 358 22 14 chr13 43905108 43905247 -76379065 + MIRb SINE MIR 22 164 -104 8 919 348 244 0 13 chr13 43906460 43906539 -76377773 - ID4_ SINE ID -4 79 2 8 919 402 300 44 51 chr13 43906547 43906684 -76377628 - ID_B1 SINE B4 -4 220 85 8 919 385 312 142 31 chr13 43906880 43907141 -76377171 + MER65D LTR ERV1 184 473 0 8 919 279 0 0 0 chr13 43907225 43907256 -76377056 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 8 919 5103 96 4 38 chr13 43907610 43908378 -76375934 - L1_Mus3 LINE L1 -1 6637 5896 8 919 294 348 60 23 chr13 43908519 43908743 -76375569 - MIRb SINE MIR -24 252 23 8 920 22 35 0 0 chr13 43909846 43909875 -76374437 + AT_rich Low_complexity Low_complexity 1 29 0 8 920 532 265 61 0 chr13 43909894 43910041 -76374271 - RSINE1 SINE B4 -9 156 1 8 920 270 0 0 0 chr13 43910092 43910122 -76374190 + (CAT)n Simple_repeat Simple_repeat 2 31 0 8 920 332 295 67 44 chr13 43910535 43910670 -76373642 - MLT1A1 LTR MaLR -3 405 268 8 920 314 216 13 39 chr13 43910790 43910867 -76373445 - MTEb LTR MaLR -25 354 280 8 920 228 323 129 0 chr13 43912255 43912348 -76371964 - HAL1 LINE L1 -1856 651 547 8 920 716 245 52 26 chr13 43913205 43913398 -76370914 - B3A SINE B2 0 198 1 8 920 208 214 0 0 chr13 43914663 43914705 -76369607 + C-rich Low_complexity Low_complexity 1 42 0 8 920 1095 69 21 0 chr13 43915155 43915299 -76369013 + B1_Mus1 SINE Alu 2 148 0 8 920 274 23 23 23 chr13 43915301 43915345 -76368967 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 8 920 225 132 0 0 chr13 43915400 43915438 -76368874 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 8 920 467 327 127 31 chr13 43915460 43915981 -76368331 - L1MC LINE L1 -2058 5824 5254 8 920 194 0 39 0 chr13 43916000 43916026 -76368286 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 8 920 2690 130 7 5 chr13 43916928 43917338 -76366974 - MTC LTR MaLR -8 413 3 8 920 223 358 75 59 chr13 43917381 43917436 -76366876 - B4A SINE B4 -17 275 86 8 920 393 287 0 129 chr13 43917436 43917568 -76366744 - B1F SINE Alu -2 115 1 8 920 264 329 70 42 chr13 43918487 43918630 -76365682 + MER20B DNA MER1_type 44 190 -593 8 920 2458 151 12 31 chr13 43918731 43919148 -76365164 + MTC LTR MaLR 13 421 0 8 920 582 256 61 24 chr13 43919164 43919328 -76364984 - B3 SINE B2 -46 170 1 8 920 319 225 67 11 chr13 43919332 43919422 -76364890 - L3 LINE CR1 -3467 1022 928 8 920 414 0 0 0 chr13 43919510 43919556 -76364756 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 920 567 53 0 0 chr13 43919673 43919748 -76364564 + (CA)n Simple_repeat Simple_repeat 1 75 0 8 920 183 80 0 0 chr13 43919977 43920002 -76364310 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 8 920 366 163 83 42 chr13 43920074 43920170 -76364142 - RMER15 LTR ERVL -44 531 432 8 920 270 262 0 15 chr13 43920297 43920363 -76363949 + ORR1D2 LTR MaLR 3 67 -303 8 920 233 267 133 0 chr13 43921537 43921612 -76362700 - MER5C DNA MER1_type -1 312 228 8 920 223 317 112 28 chr13 43921861 43921968 -76362344 - MIRm SINE MIR 0 276 161 8 920 1028 218 180 34 chr13 43922184 43922507 -76361805 - ORR1D1 LTR MaLR -4 370 1 8 920 750 250 35 84 chr13 43922726 43922953 -76361359 + B3A SINE B2 1 216 0 8 920 337 302 80 32 chr13 43923307 43923495 -76360817 + L1MB5 LINE L1 3585 3781 -2365 8 920 1053 280 107 88 chr13 43923769 43924108 -76360204 + L1MB5 LINE L1 4582 4936 -1210 8 920 1355 231 40 48 chr13 43924108 43924481 -76359831 - ORR1D2 LTR MaLR 0 370 1 8 920 1053 280 107 88 chr13 43924481 43924629 -76359683 + L1MB5 LINE L1 4937 5078 -1068 8 920 222 37 0 0 chr13 43924629 43924656 -76359656 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 8 920 1053 280 107 88 chr13 43924656 43924669 -76359643 + L1MB5 LINE L1 5079 5079 -1067 8 920 1433 84 16 0 chr13 43924669 43924859 -76359453 - B2_Mm2 SINE B2 -1 194 2 8 920 1053 284 109 82 chr13 43924859 43925211 -76359101 + L1MB5 LINE L1 5079 5447 -727 8 920 1230 160 0 104 chr13 43925211 43925462 -76358850 + URR1B DNA MER1_type 1 225 0 8 920 506 307 122 52 chr13 43925462 43925770 -76358542 + L1MB5 LINE L1 5448 5796 -378 8 920 302 308 85 101 chr13 43925772 43925817 -76358495 - B2_Mm2 SINE B2 -9 186 147 8 920 270 0 0 0 chr13 43925817 43925847 -76358465 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 920 497 297 94 3 chr13 43925847 43925989 -76358323 - B3A SINE B2 -46 152 2 8 920 299 293 0 95 chr13 43926181 43926328 -76357984 + L1MB5 LINE L1 6042 6174 0 8 920 724 262 122 43 chr13 43926479 43926734 -76357578 + ORSL DNA Tip100 1 275 0 9 920 189 0 0 0 chr13 43927110 43927131 -76357181 + (TC)n Simple_repeat Simple_repeat 2 22 0 9 920 486 234 0 0 chr13 43927549 43927724 -76356588 + (CA)n Simple_repeat Simple_repeat 1 175 0 9 920 543 101 0 0 chr13 43927764 43927843 -76356469 + (TTTC)n Simple_repeat Simple_repeat 4 82 0 9 920 378 0 0 0 chr13 43927845 43927887 -76356425 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 920 295 260 86 38 chr13 43928546 43928666 -76355646 + MIR SINE MIR 26 151 -117 9 920 498 345 85 46 chr13 43928707 43929035 -76355277 - MLT1A LTR MaLR 0 374 34 9 920 783 32 0 0 chr13 43929117 43929211 -76355101 + (TTC)n Simple_repeat Simple_repeat 1 94 0 9 920 667 280 81 99 chr13 43929237 43929762 -76354550 + MLT1E2 LTR MaLR 1 503 -2 9 920 226 268 0 0 chr13 43930344 43930400 -76353912 + MLT1A1 LTR MaLR 337 392 -16 9 920 226 73 49 0 chr13 43931559 43931600 -76352712 + (GA)n Simple_repeat Simple_repeat 1 43 0 9 920 198 0 0 0 chr13 43932603 43932625 -76351687 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 9 920 521 163 39 0 chr13 43932741 43932870 -76351442 + C-rich Low_complexity Low_complexity 5 138 0 9 920 773 225 113 16 chr13 43934007 43934192 -76350120 + B3 SINE B2 8 210 -6 9 920 673 221 0 8 chr13 43934395 43934518 -76349794 - B1_Mur1 SINE Alu -25 124 3 9 920 1001 108 0 22 chr13 43935070 43935250 -76349062 + (GGGA)n Simple_repeat Simple_repeat 3 178 0 9 920 546 43 0 0 chr13 43935251 43935320 -76348992 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 9 920 2045 161 12 165 chr13 43935398 43935895 -76348417 - MTC LTR MaLR 0 421 1 9 920 464 253 287 0 chr13 43936598 43936772 -76347540 - ID_B1 SINE B4 0 224 1 9 920 306 0 0 0 chr13 43936968 43937002 -76347310 + (A)n Simple_repeat Simple_repeat 1 34 0 9 920 438 284 110 0 chr13 43937477 43937604 -76346708 - B1_Mur1 SINE Alu -7 142 2 9 920 379 281 103 100 chr13 43937894 43938175 -76346137 - MLT1A LTR MaLR 0 374 93 9 920 1064 301 50 21 chr13 43938213 43938552 -76345760 - ORR1E LTR MaLR -2 357 9 9 920 384 22 0 0 chr13 43939145 43939190 -76345122 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 920 734 261 34 37 chr13 43939267 43939565 -76344747 + RLTR15 LTR ERVK 45 341 -18 9 920 477 0 0 0 chr13 43939577 43939630 -76344682 + (TG)n Simple_repeat Simple_repeat 1 53 0 9 920 405 309 14 48 chr13 43939630 43939776 -76344536 - RSINE1 SINE B4 -24 141 1 9 920 399 328 76 0 chr13 43940125 43940256 -76344056 + RSINE1 SINE B4 8 148 -17 9 920 306 0 0 0 chr13 43940262 43940296 -76344016 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 920 378 258 0 58 chr13 43940338 43940441 -76343871 + 7SLRNA srpRNA srpRNA 5 101 -213 9 920 225 0 0 0 chr13 43941317 43941342 -76342970 + (CAA)n Simple_repeat Simple_repeat 3 27 0 9 920 236 301 0 27 chr13 43941569 43941644 -76342668 + ID4 SINE ID 1 73 -10 9 920 390 292 56 106 chr13 43941695 43942071 -76342241 - ORR1E LTR MaLR -2 357 1 9 920 233 236 165 15 chr13 43943117 43943199 -76341113 + MIR SINE MIR 117 218 -50 9 920 186 43 0 0 chr13 43943831 43943854 -76340458 + (TCC)n Simple_repeat Simple_repeat 3 25 0 9 920 447 92 0 0 chr13 43944178 43944243 -76340069 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 9 920 702 248 73 15 chr13 43945948 43946153 -76338159 + ID_B1 SINE B4 2 218 -6 9 920 733 163 11 0 chr13 43946172 43946350 -76337962 + GA-rich Low_complexity Low_complexity 1 180 0 9 920 198 103 0 0 chr13 43946350 43946379 -76337933 + (GGA)n Simple_repeat Simple_repeat 3 31 0 9 920 393 200 367 114 chr13 43947402 43947560 -76336752 + B3A SINE B2 1 198 0 9 920 237 65 0 0 chr13 43947575 43947606 -76336706 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 920 213 307 92 50 chr13 43947962 43948082 -76336230 + MIRm SINE MIR 15 139 -137 9 920 251 193 163 102 chr13 43948408 43948506 -76335806 - MLT1J2 LTR MaLR -318 130 27 9 920 296 299 0 33 chr13 43949251 43949341 -76334971 - PB1D9 SINE Alu -31 89 3 9 920 276 313 66 44 chr13 43949414 43949551 -76334761 + L2a LINE L2 3266 3405 -21 9 920 859 309 33 36 chr13 43950254 43950590 -76333722 - ORR1E LTR MaLR 0 359 25 9 920 2307 239 66 55 chr13 43950629 43951339 -76332973 + MTD-int LTR MaLR 541 1258 0 9 920 2054 192 26 21 chr13 43951357 43951746 -76332566 + MTD LTR MaLR 14 404 -15 9 920 394 301 0 50 chr13 43951892 43952011 -76332301 + RSINE1 SINE B4 21 133 -32 9 920 2538 90 60 3 chr13 43952024 43952392 -76331920 + ORR1B1 LTR MaLR 1 389 -5 9 920 650 35 12 0 chr13 43952423 43952508 -76331804 + (TAGA)n Simple_repeat Simple_repeat 3 88 0 9 920 476 302 78 0 chr13 43953075 43953204 -76331108 - ID_B1 SINE B4 -4 220 82 9 920 23 33 0 0 chr13 43953720 43953750 -76330562 + AT_rich Low_complexity Low_complexity 1 30 0 9 920 558 253 0 74 chr13 43953754 43953929 -76330383 - RSINE1 SINE B4 0 165 4 9 920 223 129 0 46 chr13 43953933 43953998 -76330314 + A-rich Low_complexity Low_complexity 2 63 0 9 920 1357 242 118 3 chr13 43954724 43955056 -76329256 + ORR1D2 LTR MaLR 1 370 0 9 920 418 262 18 18 chr13 43955811 43955920 -76328392 - PB1D10 SINE Alu -8 109 1 9 920 1289 148 62 5 chr13 43957190 43957401 -76326911 - URR1B DNA MER1_type 0 225 3 9 920 186 311 0 0 chr13 43957965 43958010 -76326302 - MIR3 SINE MIR -52 156 112 9 920 339 25 0 0 chr13 43958725 43958765 -76325547 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 920 234 0 0 0 chr13 43960810 43960836 -76323476 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 9 920 235 222 0 18 chr13 43961476 43961531 -76322781 + G-rich Low_complexity Low_complexity 5 58 0 9 920 995 234 89 38 chr13 43961803 43962150 -76322162 + MLT1A0 LTR MaLR 1 365 0 9 920 303 383 45 32 chr13 43962372 43962593 -76321719 - MIR SINE MIR -10 252 29 9 920 241 343 28 35 chr13 43962880 43963022 -76321290 - MARNA DNA Mariner -287 299 159 9 920 393 21 0 0 chr13 43963093 43963134 -76321178 + (GA)n Simple_repeat Simple_repeat 1 41 0 9 920 948 94 0 19 chr13 43963134 43963296 -76321016 + (GAA)n Simple_repeat Simple_repeat 3 161 0 9 920 393 21 0 0 chr13 43963296 43963302 -76321010 + (GA)n Simple_repeat Simple_repeat 2 7 0 9 920 433 267 19 9 chr13 43963912 43964018 -76320294 + MER58A DNA MER1_type 35 141 -83 9 920 416 303 129 26 chr13 43964133 43964326 -76319986 + MLT1L LTR MaLR 202 414 -196 9 920 4300 210 96 52 chr13 43964618 43965881 -76318431 - RMER12 LTR ERVK -4 1318 1 9 920 228 316 170 15 chr13 43966410 43966581 -76317731 - MIRb SINE MIR -69 193 1 9 920 212 217 0 32 chr13 43966672 43966734 -76317578 + CT-rich Low_complexity Low_complexity 1 60 0 9 920 371 307 35 9 chr13 43966753 43966868 -76317444 - PB1D7 SINE Alu -2 118 1 9 920 1040 122 219 11 chr13 43967878 43968061 -76316251 + URR1A DNA MER1_type 5 225 -1 9 920 362 247 0 0 chr13 43968182 43968271 -76316041 + U6 snRNA snRNA 12 100 -7 9 920 879 283 99 29 chr13 43968289 43968631 -76315681 + Lx8 LINE L1 7080 7445 -28 9 920 22 0 0 0 chr13 43968643 43968665 -76315647 + AT_rich Low_complexity Low_complexity 1 22 0 9 920 868 188 0 13 chr13 43968703 43968854 -76315458 + B1_Mur4 SINE Alu 1 149 -1 9 920 243 212 20 150 chr13 43970033 43970133 -76314179 - MLT1E1 LTR MaLR -7 647 561 9 920 704 133 12 18 chr13 43971056 43971224 -76313088 + (TATG)n Simple_repeat Simple_repeat 2 168 0 9 920 820 106 8 8 chr13 43971227 43971351 -76312961 - B1_Mus1 SINE Alu -7 141 18 9 920 474 276 65 82 chr13 43971351 43971397 -76312915 - B4 SINE B4 -73 219 53 9 920 1177 58 0 0 chr13 43971672 43971810 -76312502 + B1_Mus2 SINE Alu 3 140 -7 9 920 270 0 0 0 chr13 43971813 43971843 -76312469 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 9 920 293 231 46 0 chr13 43972105 43972170 -76312142 - ORR1E LTR MaLR -5 354 287 9 920 328 313 31 75 chr13 43972255 43972414 -76311898 + MT2B2 LTR ERVL 88 239 -345 9 920 698 206 7 78 chr13 43972335 43972488 -76311824 + B1F SINE Alu 6 147 -2 9 920 2161 159 50 5 chr13 43972490 43972869 -76311443 - MTC LTR MaLR 0 421 26 9 920 525 330 36 36 chr13 43973106 43973329 -76310983 + MIR SINE MIR 6 228 -34 9 920 446 337 5 26 chr13 43973620 43973809 -76310503 + MLT1F1 LTR MaLR 1 185 -384 9 920 387 0 0 0 chr13 43973843 43973886 -76310426 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 920 521 235 29 22 chr13 43973920 43974059 -76310253 - MLT2B1 LTR ERVL -375 145 6 9 920 280 297 38 99 chr13 43974052 43974183 -76310129 + MLT1F1 LTR MaLR 187 309 -239 9 920 324 0 0 0 chr13 43975648 43975684 -76308628 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 920 1060 307 62 28 chr13 43976000 43976685 -76307627 + L1MA5A LINE L1 5328 6040 -260 9 920 491 263 47 79 chr13 43976987 43977003 -76307309 + MER44A DNA MER2_type 7 18 -321 9 920 920 267 73 60 chr13 43977003 43977373 -76306939 + MTEa LTR MaLR 1 375 -4 9 920 491 263 47 79 chr13 43977373 43977546 -76306766 + MER44A DNA MER2_type 19 190 -149 9 920 270 0 0 0 chr13 43978025 43978055 -76306257 + (A)n Simple_repeat Simple_repeat 1 30 0 9 920 2465 64 3 87 chr13 43978057 43978414 -76305898 + ORR1A2 LTR MaLR 1 327 0 9 920 269 312 59 74 chr13 43978427 43978683 -76305629 - MLT1I LTR MaLR -3 408 157 9 920 192 125 0 0 chr13 43979746 43979778 -76304534 + (CAGA)n Simple_repeat Simple_repeat 3 34 0 1 920 358 342 123 43 chr13 43979901 43980405 -76303907 + L2b LINE L2 2752 3322 -104 1 920 502 117 0 18 chr13 43980405 43980518 -76303794 + (CA)n Simple_repeat Simple_repeat 2 112 0 1 920 358 352 87 66 chr13 43980518 43980614 -76303698 + L2b LINE L2 3273 3373 -2 1 920 479 45 15 0 chr13 43981547 43981613 -76302699 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 920 399 119 0 0 chr13 43981610 43981677 -76302635 + (TCC)n Simple_repeat Simple_repeat 1 67 0 1 920 300 111 0 0 chr13 43982690 43982735 -76301577 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 920 220 338 0 40 chr13 43983058 43983132 -76301180 + MIR SINE MIR 87 160 -108 1 920 912 286 57 42 chr13 43983610 43983946 -76300366 - ORR1E LTR MaLR -17 342 2 1 920 261 0 0 0 chr13 43984286 43984315 -76299997 + (CACAA)n Simple_repeat Simple_repeat 4 32 0 1 920 435 213 9 44 chr13 43984345 43984458 -76299854 + Lx7 LINE L1 5916 6024 -1672 1 920 5371 183 66 41 chr13 43984469 43985619 -76298693 + Lx7 LINE L1 6518 7696 0 1 920 376 158 39 26 chr13 43985632 43985710 -76298602 + RLTR25B LTR ERVK 424 502 -526 1 920 815 71 18 0 chr13 43985641 43985754 -76298558 + B1_Mus2 SINE Alu 33 147 0 1 920 543 221 55 68 chr13 43985829 43985975 -76298337 + ID_B1 SINE B4 81 224 0 1 920 720 241 207 39 chr13 43986324 43986623 -76297689 - ORR1E LTR MaLR -3 356 8 1 920 207 130 18 36 chr13 43986805 43986861 -76297451 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 920 258 306 61 37 chr13 43986965 43987128 -76297184 - L1MB2 LINE L1 -61 6110 5944 1 920 288 138 0 0 chr13 43987183 43987248 -76297064 + (T)n Simple_repeat Simple_repeat 1 65 0 1 920 194 150 25 0 chr13 43987954 43987994 -76296318 + C-rich Low_complexity Low_complexity 4 44 0 1 920 276 30 0 0 chr13 43988004 43988037 -76296275 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 920 466 200 0 43 chr13 43988884 43988978 -76295334 - B1_Mur1 SINE Alu -18 131 42 1 920 489 350 62 41 chr13 43990321 43990661 -76293651 - RMER15 LTR ERVL -15 560 214 1 920 234 132 26 0 chr13 43990649 43990687 -76293625 - RMER15 LTR ERVL -524 51 13 1 920 211 345 95 8 chr13 43990874 43991032 -76293280 + MIR SINE MIR 45 218 -44 1 920 212 309 23 23 chr13 43992027 43992113 -76292199 + (TATG)n Simple_repeat Simple_repeat 1 86 0 1 920 513 225 57 96 chr13 43992245 43992402 -76291910 + RSINE1 SINE B4 2 152 -13 1 920 183 80 0 0 chr13 43992440 43992465 -76291847 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 920 210 91 0 0 chr13 43992801 43992834 -76291478 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 920 403 255 0 30 chr13 43993107 43993208 -76291104 + ID_B1 SINE B4 127 224 0 1 920 515 188 9 0 chr13 43993245 43993357 -76290955 + (TA)n Simple_repeat Simple_repeat 1 113 0 1 920 240 223 0 0 chr13 43994882 43994985 -76289327 + T-rich Low_complexity Low_complexity 1 103 0 1 920 3133 74 5 9 chr13 43994989 43995411 -76288901 - L1Md_F2 LINE L1 -2 6580 6161 1 920 375 60 0 0 chr13 43995414 43995464 -76288848 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 920 226 204 0 0 chr13 43996092 43996136 -76288176 - MIRc SINE MIR -116 152 109 1 920 296 333 77 14 chr13 43996160 43996303 -76288009 - MLT1J2 LTR MaLR -34 414 263 1 920 218 302 16 0 chr13 43996705 43996768 -76287544 + C-rich Low_complexity Low_complexity 4 67 0 1 920 215 344 45 30 chr13 43996866 43996998 -76287314 - MIR SINE MIR -120 142 9 1 920 334 324 191 0 chr13 43997284 43997488 -76286824 + L1ME2 LINE L1 5652 5894 -270 1 920 244 333 45 17 chr13 43997599 43997776 -76286536 + L1ME2 LINE L1 5970 6151 -11 1 920 218 340 110 12 chr13 43998046 43998210 -76286102 + MIRb SINE MIR 31 210 -58 1 920 510 17 0 0 chr13 44000023 44000082 -76284230 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 920 875 246 70 37 chr13 44000278 44000548 -76283764 - B4A SINE B4 -10 282 4 2 920 204 154 0 93 chr13 44002173 44002216 -76282096 + MER5A DNA MER1_type 63 101 -88 3 920 289 339 119 88 chr13 44002248 44002870 -76281442 + LTR48B LTR ERV1 3 643 -1 4 920 967 139 197 56 chr13 44005756 44005954 -76278358 + URR1A DNA MER1_type 1 226 0 5 920 411 297 0 8 chr13 44006079 44006198 -76278114 + Lx8 LINE L1 7139 7256 -217 6 920 333 0 0 0 chr13 44006574 44006611 -76277701 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 920 270 0 0 0 chr13 44006611 44006640 -76277672 + (GA)n Simple_repeat Simple_repeat 1 30 0 8 920 560 254 0 0 chr13 44006757 44006875 -76277437 - B3A SINE B2 -79 119 2 9 920 464 321 167 45 chr13 44006877 44007236 -76277076 + L1M5 LINE L1 3285 3687 -2459 1 920 396 0 0 0 chr13 44007262 44007306 -76277006 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 920 515 308 85 37 chr13 44007342 44007492 -76276820 + L1M5 LINE L1 4849 5007 -1139 1 920 1277 230 59 97 chr13 44007492 44007882 -76276430 + MTEa LTR MaLR 1 375 -4 1 920 515 308 85 37 chr13 44007882 44008166 -76276146 + L1M5 LINE L1 5008 5304 -842 1 920 308 292 135 13 chr13 44008179 44008335 -76275977 + L1M5 LINE L1 5338 5512 -652 1 920 2000 125 22 115 chr13 44008350 44008801 -76275511 + RMER17C LTR ERVK 2 410 0 1 920 939 172 182 5 chr13 44009548 44009735 -76274577 - URR1A DNA MER1_type 0 226 7 1 920 646 304 65 33 chr13 44010039 44010314 -76273998 - B4A SINE B4 -6 286 3 1 920 546 215 26 39 chr13 44010418 44010573 -76273739 + Lx4B LINE L1 6887 7039 -19 1 920 1183 55 7 7 chr13 44010679 44010827 -76273485 - B1_Mus1 SINE Alu 0 148 1 1 920 1249 212 98 26 chr13 44010845 44011177 -76273135 + MTD LTR MaLR 13 372 -49 1 920 277 324 122 64 chr13 44011359 44011547 -76272765 - MLT1D LTR MaLR -92 518 320 1 920 333 0 0 0 chr13 44013045 44013082 -76271230 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 920 1008 224 65 58 chr13 44013094 44013355 -76270957 - B4 SINE B4 -27 265 3 2 920 258 334 115 91 chr13 44013479 44013818 -76270494 + ORR1E LTR MaLR 1 347 -12 2 920 562 193 61 71 chr13 44013947 44014159 -76270153 - L1MA6 LINE L1 -1 6299 6090 2 920 477 280 62 56 chr13 44014174 44014352 -76269960 - MLT1D LTR MaLR -321 184 6 1 920 303 298 118 73 chr13 44015176 44015480 -76268832 + ORR1E LTR MaLR 6 342 -17 2 920 231 264 61 78 chr13 44015970 44016085 -76268227 + B1F1 SINE Alu 33 145 -4 2 920 469 246 88 44 chr13 44016157 44016293 -76268019 - ID_B1 SINE B4 -2 222 81 2 920 385 312 179 8 chr13 44017578 44017830 -76266482 - MER31B LTR ERV1 -125 341 47 2 920 860 226 95 64 chr13 44018178 44018461 -76265851 + B4A SINE B4 1 292 0 2 920 306 125 0 0 chr13 44018478 44018526 -76265786 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 920 267 211 0 0 chr13 44019428 44019480 -76264832 - MTEa LTR MaLR -8 371 320 3 920 324 0 0 0 chr13 44019515 44019551 -76264761 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 920 690 234 87 114 chr13 44019993 44020070 -76264242 + B4 SINE B4 2 78 -214 3 920 429 20 0 0 chr13 44020070 44020120 -76264192 + (GAAA)n Simple_repeat Simple_repeat 4 53 0 3 920 690 234 87 114 chr13 44020120 44020341 -76263971 + B4 SINE B4 79 291 -1 3 920 467 297 97 42 chr13 44020994 44021305 -76263007 + MER47B DNA MER2_type 1 418 0 3 920 349 290 48 81 chr13 44022169 44022379 -76261933 - MLT1A LTR MaLR -78 296 94 3 920 462 36 0 0 chr13 44022612 44022668 -76261644 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 920 900 267 103 20 chr13 44022677 44022929 -76261383 - B4A SINE B4 -19 273 1 3 920 206 321 7 48 chr13 44023573 44023720 -76260592 + CT-rich Low_complexity Low_complexity 5 145 0 3 920 599 267 67 75 chr13 44023808 44024063 -76260249 - L1_Rod LINE L1 -24 5823 5571 3 920 2270 162 33 31 chr13 44024139 44024238 -76260074 + MTC LTR MaLR 1 106 -315 4 920 1027 130 222 0 chr13 44024238 44024423 -76259889 - URR1A DNA MER1_type 0 226 1 4 920 2270 162 33 31 chr13 44024423 44024743 -76259569 + MTC LTR MaLR 107 421 0 4 920 708 268 90 87 chr13 44024746 44025090 -76259222 + ORR1E LTR MaLR 11 355 -4 4 920 419 350 73 103 chr13 44025100 44025469 -76258843 + ORR1E LTR MaLR 1 358 -1 4 920 384 267 18 45 chr13 44026769 44026879 -76257433 + PB1D10 SINE Alu 5 111 -6 4 920 318 214 0 0 chr13 44027165 44027254 -76257058 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 920 378 0 0 0 chr13 44027269 44027311 -76257001 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 920 614 216 6 0 chr13 44027311 44027642 -76256670 + (CA)n Simple_repeat Simple_repeat 1 333 0 4 920 378 0 0 0 chr13 44027661 44027703 -76256609 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 920 279 0 0 0 chr13 44027703 44027733 -76256579 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 920 324 0 0 0 chr13 44028624 44028660 -76255652 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 920 348 88 0 0 chr13 44028947 44029004 -76255308 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 920 297 0 0 0 chr13 44029004 44029036 -76255276 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 920 561 282 58 0 chr13 44029036 44029224 -76255088 - B4A SINE B4 -93 199 1 5 920 356 307 0 34 chr13 44030072 44030190 -76254122 - PB1D10 SINE Alu -2 115 2 5 920 675 67 0 0 chr13 44031545 44031634 -76252678 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 5 920 530 274 31 31 chr13 44031634 44031796 -76252516 - RSINE1 SINE B4 -1 164 3 5 920 716 346 35 46 chr13 44031815 44032187 -76252125 - MER21B LTR ERV1 -398 465 98 5 920 269 405 94 5 chr13 44032480 44032681 -76251631 + MLT1H2 LTR MaLR 209 427 -62 5 920 470 229 0 79 chr13 44033008 44033122 -76251190 + B3A SINE B2 3 107 -91 5 920 360 0 0 0 chr13 44033148 44033188 -76251124 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 920 309 285 170 37 chr13 44033485 44033620 -76250692 - MLT1J2 LTR MaLR -202 246 94 6 920 369 0 0 0 chr13 44034521 44034562 -76249750 + (GA)n Simple_repeat Simple_repeat 1 41 0 6 920 776 261 79 79 chr13 44035654 44035945 -76248367 + B4A SINE B4 2 292 0 6 920 2510 131 27 0 chr13 44035955 44036329 -76247983 + MTC LTR MaLR 3 386 -35 6 920 245 285 37 83 chr13 44036757 44036883 -76247429 - B2_Mm2 SINE B2 -81 117 2 6 920 1514 285 44 16 chr13 44037532 44038027 -76246285 - L1MC1 LINE L1 -10 6323 5815 6 920 539 210 17 6 chr13 44038074 44038251 -76246061 + (TG)n Simple_repeat Simple_repeat 1 179 0 6 920 661 274 109 88 chr13 44038251 44038535 -76245777 - B4A SINE B4 0 292 3 6 920 285 275 0 0 chr13 44038535 44038615 -76245697 - L1MC1 LINE L1 -501 5832 5753 6 920 279 309 87 58 chr13 44038814 44038986 -76245326 + MLT2B3 LTR ERVL 378 554 0 6 921 521 223 88 18 chr13 44041669 44041783 -76242529 - B1F SINE Alu 0 149 28 7 921 4377 38 10 0 chr13 44041945 44042452 -76241860 + RLTR1B LTR ERV1 1 512 0 7 921 408 40 0 0 chr13 44042570 44042620 -76241692 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 921 673 12 23 0 chr13 44042620 44042705 -76241607 + (GGGAGA)n Simple_repeat Simple_repeat 4 91 0 7 921 22 35 0 0 chr13 44043270 44043299 -76241013 + AT_rich Low_complexity Low_complexity 1 29 0 7 921 213 372 0 0 chr13 44044462 44044548 -76239764 + (TG)n Simple_repeat Simple_repeat 1 86 0 7 921 1093 103 17 0 chr13 44044570 44044744 -76239568 + (TTCTC)n Simple_repeat Simple_repeat 4 180 0 7 921 243 262 189 98 chr13 44044748 44044949 -76239363 - B4A SINE B4 -73 219 1 7 921 652 323 67 7 chr13 44045069 44045333 -76238979 + MER2 DNA MER2_type 23 313 -32 7 921 618 313 58 86 chr13 44046434 44046794 -76237518 - ORR1E LTR MaLR -7 352 3 7 921 367 293 53 73 chr13 44047677 44047828 -76236484 - Tigger7 DNA MER2_type -3 2488 2341 8 921 264 346 29 9 chr13 44049054 44049159 -76235153 - L2a LINE L2 -4 3422 3316 8 921 772 279 76 188 chr13 44049179 44049652 -76234660 + MER44B DNA MER2_type 21 441 -109 8 921 252 307 34 0 chr13 44049817 44049905 -76234407 + ORR1D2 LTR MaLR 280 370 0 8 921 322 241 76 0 chr13 44050205 44050284 -76234028 + RSINE1 SINE B4 41 125 -40 8 921 304 286 165 70 chr13 44050356 44050670 -76233642 - MLT1A LTR MaLR -21 344 1 8 921 556 254 109 43 chr13 44052127 44052337 -76231975 + ID_B1 SINE B4 1 224 0 8 921 294 264 75 122 chr13 44052867 44053014 -76231298 + MIRb SINE MIR 12 151 -125 8 921 415 322 108 17 chr13 44053121 44053465 -76230847 + L1MB3 LINE L1 5725 6099 -84 8 921 328 290 116 100 chr13 44054714 44055083 -76229229 - MTE2b LTR MaLR 0 379 1 8 921 887 253 44 197 chr13 44055580 44056058 -76228254 - MTD LTR MaLR -14 405 1 9 921 446 373 50 21 chr13 44056094 44056332 -76227980 - MIR SINE MIR -3 259 15 9 921 464 355 46 15 chr13 44056419 44056682 -76227630 - LTR16A LTR ERVL -109 342 72 9 921 753 208 0 0 chr13 44057330 44057503 -76226809 + (TG)n Simple_repeat Simple_repeat 2 174 0 9 921 438 20 0 0 chr13 44057789 44057840 -76226472 + (TG)n Simple_repeat Simple_repeat 1 51 0 9 921 774 113 0 0 chr13 44057841 44057983 -76226329 + (GA)n Simple_repeat Simple_repeat 1 142 0 9 921 710 269 32 21 chr13 44058010 44058196 -76226116 + B3 SINE B2 2 189 -27 9 921 253 311 0 0 chr13 44058872 44058933 -76225379 + ID4 SINE ID 21 81 -2 9 921 275 271 63 39 chr13 44059029 44059156 -76225156 + L1M5 LINE L1 5594 5723 -401 9 921 570 217 0 0 chr13 44059306 44059433 -76224879 + (TG)n Simple_repeat Simple_repeat 1 127 0 9 921 423 0 0 0 chr13 44059433 44059480 -76224832 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 1 921 570 217 0 0 chr13 44059480 44059495 -76224817 + (TG)n Simple_repeat Simple_repeat 2 16 0 1 921 306 227 0 0 chr13 44059513 44059588 -76224724 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 921 286 418 107 40 chr13 44060071 44060425 -76223887 - MER115 DNA Tip100 -189 504 127 1 921 304 237 26 0 chr13 44060447 44060523 -76223789 + ORR1D1 LTR MaLR 1 78 -296 1 921 350 23 0 0 chr13 44060519 44060562 -76223750 + ORR1C2 LTR MaLR 340 382 -2 1 921 468 290 68 119 chr13 44060662 44061014 -76223298 - MLT1B LTR MaLR -4 386 53 1 921 421 248 17 34 chr13 44061673 44061790 -76222522 + PB1D10 SINE Alu 1 115 -2 1 921 226 299 130 0 chr13 44061837 44061991 -76222321 + L1MC4 LINE L1 7055 7228 -814 1 921 425 261 37 79 chr13 44062473 44062529 -76221783 + L1MC4 LINE L1 7836 7891 -151 1 921 564 269 7 0 chr13 44062529 44062670 -76221642 + B1F SINE Alu 1 142 -7 1 921 425 261 37 79 chr13 44062670 44062829 -76221483 + L1MC4 LINE L1 7892 8042 0 1 921 1192 290 49 8 chr13 44063322 44063711 -76220601 - MTD LTR MaLR -14 405 1 1 921 590 234 58 39 chr13 44064751 44064956 -76219356 + RMER15 LTR ERVL 354 562 -13 1 921 315 219 0 68 chr13 44066391 44066479 -76217833 + B1F1 SINE Alu 67 148 -1 1 921 272 326 21 11 chr13 44066584 44066677 -76217635 - PB1D10 SINE Alu -2 115 22 1 921 396 0 0 0 chr13 44067285 44067329 -76216983 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 921 302 311 60 39 chr13 44067551 44067898 -76216414 + MLT1A1 LTR MaLR 21 465 -2 1 921 366 94 50 40 chr13 44068109 44068209 -76216103 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 1 921 1050 101 0 0 chr13 44068545 44068683 -76215629 - B1_Mus1 SINE Alu -10 138 1 1 921 299 252 118 29 chr13 44068691 44068793 -76215519 - PB1D10 SINE Alu -6 111 1 1 921 261 252 20 40 chr13 44070299 44070448 -76213864 + A-rich Low_complexity Low_complexity 2 147 0 1 921 201 154 0 0 chr13 44070667 44070706 -76213606 + A-rich Low_complexity Low_complexity 1 39 0 1 921 225 0 0 0 chr13 44071647 44071672 -76212640 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 1 921 1157 89 6 0 chr13 44071674 44071842 -76212470 + (GGGGA)n Simple_repeat Simple_repeat 4 172 0 1 921 2056 166 48 32 chr13 44073596 44074066 -76210246 - RMER4B LTR ERVK -129 456 14 1 921 1541 201 60 32 chr13 44074706 44075086 -76209226 - MTD LTR MaLR -27 392 19 1 921 3466 94 23 4 chr13 44075474 44075954 -76208358 + L1_Mm LINE L1 5395 5883 0 1 921 328 277 129 25 chr13 44076280 44076443 -76207869 + MLT1C LTR MaLR 5 184 -283 1 921 284 174 87 0 chr13 44076504 44076573 -76207739 + B3 SINE B2 137 211 -5 1 921 21 57 0 0 chr13 44076579 44076614 -76207698 + AT_rich Low_complexity Low_complexity 1 35 0 1 921 429 20 0 0 chr13 44076672 44076722 -76207590 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 921 201 39 0 0 chr13 44076722 44076747 -76207565 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 921 207 0 0 0 chr13 44076867 44076890 -76207422 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 921 559 293 0 0 chr13 44077159 44077282 -76207030 + B3 SINE B2 28 150 -66 1 921 2038 81 30 61 chr13 44077548 44077877 -76206435 - ORR1A2 LTR MaLR -8 319 1 1 921 547 265 52 75 chr13 44078807 44079019 -76205293 + ID_B1 SINE B4 13 219 -5 1 921 291 161 0 0 chr13 44079036 44079092 -76205220 + (CCAA)n Simple_repeat Simple_repeat 2 57 0 1 921 193 320 12 37 chr13 44079684 44079765 -76204547 - MIR SINE MIR -89 119 41 1 921 216 0 0 0 chr13 44080455 44080479 -76203833 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 921 975 152 0 0 chr13 44081326 44081504 -76202808 + (CA)n Simple_repeat Simple_repeat 1 178 0 1 921 451 270 9 0 chr13 44081523 44081638 -76202674 - MLT1A LTR MaLR -4 370 255 1 921 342 129 0 0 chr13 44081696 44081758 -76202554 + (TTGG)n Simple_repeat Simple_repeat 2 63 0 1 921 303 273 52 0 chr13 44081761 44081838 -76202474 - ID4 SINE ID -2 81 1 1 921 249 320 53 33 chr13 44081849 44082001 -76202311 - MLT1A LTR MaLR -219 155 1 1 921 383 297 86 79 chr13 44083656 44084062 -76200250 - MLT1C LTR MaLR -7 460 52 1 921 688 273 0 30 chr13 44084067 44084187 -76200125 + ID_B1 SINE B4 2 119 -105 1 921 3000 96 2 0 chr13 44084187 44084582 -76199730 + MTA_Mm LTR MaLR 1 396 0 1 921 688 273 0 30 chr13 44084582 44084627 -76199685 + ID_B1 SINE B4 120 162 -62 1 921 249 33 0 0 chr13 44084969 44084999 -76199313 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 921 765 275 153 51 chr13 44087561 44087894 -76196418 + MTEb LTR MaLR 1 367 -12 1 921 981 214 45 5 chr13 44087911 44088113 -76196199 + ID_B1 SINE B4 2 211 -13 1 921 684 195 12 6 chr13 44088139 44088309 -76196003 + GA-rich Low_complexity Low_complexity 2 172 0 1 921 446 183 53 0 chr13 44089433 44089564 -76194748 + CT-rich Low_complexity Low_complexity 2 139 0 1 921 423 0 0 0 chr13 44090592 44090639 -76193673 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 921 764 268 295 20 chr13 44090873 44091314 -76192998 + RMER15 LTR ERVL 14 575 0 1 921 426 108 0 0 chr13 44091499 44091573 -76192739 + (TC)n Simple_repeat Simple_repeat 1 74 0 1 921 503 163 39 39 chr13 44091640 44091742 -76192570 + B1_Mus2 SINE Alu 2 103 -44 1 921 229 317 85 67 chr13 44091820 44092043 -76192269 + MER34A1 LTR ERV1 288 514 -73 1 921 783 306 60 25 chr13 44092783 44093064 -76191248 + B4A SINE B4 2 292 0 1 921 213 39 0 0 chr13 44093188 44093214 -76191098 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 921 779 298 60 18 chr13 44094047 44094379 -76189933 + RMER5 LTR ERV1 179 524 -10 1 921 180 0 0 0 chr13 44094392 44094412 -76189900 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 921 351 0 0 0 chr13 44094426 44094465 -76189847 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 921 501 263 68 43 chr13 44094689 44094852 -76189460 + RCHARR1 DNA MER1_type 9 175 -799 1 921 642 174 1 93 chr13 44095092 44095268 -76189044 - ORR1C1 LTR MaLR 0 378 168 1 921 1336 186 11 72 chr13 44095562 44095840 -76188472 - ORR1C1 LTR MaLR -117 261 1 1 921 460 239 17 50 chr13 44096102 44096221 -76188091 + PB1D7 SINE Alu 5 119 -1 1 921 289 173 39 39 chr13 44096319 44096397 -76187915 + MER5A1 DNA MER1_type 1 78 -88 1 921 787 186 0 14 chr13 44096397 44096544 -76187768 + B1_Mus1 SINE Alu 4 148 0 1 921 216 0 0 0 chr13 44096544 44096568 -76187744 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1 921 595 333 64 45 chr13 44096655 44096919 -76187393 - B4 SINE B4 0 292 24 1 921 333 0 0 0 chr13 44097590 44097627 -76186685 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 921 189 0 0 0 chr13 44097649 44097670 -76186642 + (TCCC)n Simple_repeat Simple_repeat 3 23 0 1 921 516 275 40 55 chr13 44098731 44098931 -76185381 + B3A SINE B2 2 198 0 1 921 766 194 0 7 chr13 44099013 44099153 -76185159 + B1_Mur1 SINE Alu 10 148 -1 1 921 455 237 0 0 chr13 44099199 44099292 -76185020 - B4A SINE B4 0 292 200 1 921 239 200 42 14 chr13 44099293 44099364 -76184948 + (TA)n Simple_repeat Simple_repeat 1 73 0 1 921 378 0 0 0 chr13 44099365 44099407 -76184905 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 1 921 582 298 58 6 chr13 44099413 44099585 -76184727 - B4A SINE B4 -102 190 10 1 921 591 273 96 53 chr13 44099697 44099906 -76184406 - ID_B1 SINE B4 -3 221 4 1 921 700 224 18 24 chr13 44099935 44099950 -76184362 - B3 SINE B2 -51 165 149 1 921 243 103 0 0 chr13 44099950 44099989 -76184323 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 1 921 773 176 7 8 chr13 44099989 44100138 -76184174 - B3A SINE B2 -68 148 2 1 921 487 310 78 24 chr13 44100493 44100787 -76183525 - LTR48B LTR ERV1 -11 633 324 1 921 2393 104 0 3 chr13 44101140 44101468 -76182844 + ORR1A2 LTR MaLR 1 327 0 1 921 288 0 0 0 chr13 44101747 44101779 -76182533 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 921 545 264 74 0 chr13 44101784 44101932 -76182380 - B3A SINE B2 -39 159 1 1 921 686 274 142 23 chr13 44103130 44103391 -76180921 + B4A SINE B4 1 292 0 1 921 297 0 0 0 chr13 44103405 44103438 -76180874 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 921 863 267 107 4 chr13 44103994 44104257 -76180055 - B4A SINE B4 -2 290 1 1 921 909 289 97 23 chr13 44105137 44105488 -76178824 + MTEa LTR MaLR 2 378 -1 1 921 240 301 93 22 chr13 44105548 44105687 -76178625 + MLT2C2 LTR ERVL 389 537 -22 1 921 1258 148 204 8 chr13 44105909 44106261 -76178051 - MTC LTR MaLR 0 421 1 1 921 21 0 0 0 chr13 44106643 44106664 -76177648 + AT_rich Low_complexity Low_complexity 1 21 0 1 921 246 330 44 62 chr13 44107727 44107840 -76176472 + MT2B2 LTR ERVL 128 238 -346 1 921 605 259 8 15 chr13 44107749 44107897 -76176415 + ID_B1 SINE B4 76 219 -5 1 921 376 240 0 77 chr13 44108503 44108607 -76175705 + PB1D10 SINE Alu 5 100 -17 1 921 433 247 18 0 chr13 44108691 44108861 -76175451 + G-rich Low_complexity Low_complexity 4 176 0 1 921 948 95 0 0 chr13 44108882 44109019 -76175293 + (GGGAA)n Simple_repeat Simple_repeat 3 139 0 1 921 277 295 0 60 chr13 44109623 44109706 -76174606 - MER34A1 LTR ERV1 -3 584 507 1 921 23 0 0 0 chr13 44109732 44109755 -76174557 + AT_rich Low_complexity Low_complexity 1 23 0 1 921 713 158 79 0 chr13 44109776 44109903 -76174409 - B1_Mus2 SINE Alu -1 146 10 1 921 1156 155 9 14 chr13 44110077 44110299 -76174013 + Lx LINE L1 6434 6654 0 1 921 312 27 0 0 chr13 44110587 44110624 -76173688 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 921 377 197 0 78 chr13 44110644 44110721 -76173591 - ID4 SINE ID -10 73 3 1 921 342 91 0 0 chr13 44111195 44111250 -76173062 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 1 921 189 0 0 0 chr13 44111252 44111273 -76173039 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 921 348 204 31 51 chr13 44111683 44111781 -76172531 - MER34A1 LTR ERV1 -71 516 421 1 921 1263 261 112 16 chr13 44112186 44112634 -76171678 + RMER5 LTR ERV1 33 523 -11 2 921 654 263 105 29 chr13 44112655 44112894 -76171418 - MER2 DNA MER2_type -86 259 3 2 921 264 59 0 0 chr13 44114163 44114197 -76170115 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 921 623 197 6 0 chr13 44114697 44114875 -76169437 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 921 510 61 0 0 chr13 44114899 44114965 -76169347 + (TC)n Simple_repeat Simple_repeat 2 67 0 2 921 300 102 0 0 chr13 44114970 44115019 -76169293 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 921 234 268 115 23 chr13 44115697 44115827 -76168485 - L1MA4 LINE L1 -121 6179 6038 2 921 192 202 21 63 chr13 44116760 44116855 -76167457 + CT-rich Low_complexity Low_complexity 3 93 0 2 921 387 0 0 0 chr13 44116969 44117012 -76167300 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 921 360 0 0 0 chr13 44117022 44117062 -76167250 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 921 189 0 0 0 chr13 44118412 44118433 -76165879 + (T)n Simple_repeat Simple_repeat 1 21 0 2 921 299 267 140 83 chr13 44118735 44118964 -76165348 - LTR48 LTR ERV1 -12 775 534 2 921 1008 313 83 41 chr13 44119016 44119379 -76164933 - MLT1A1 LTR MaLR -12 396 19 2 921 287 263 79 20 chr13 44120227 44120328 -76163984 - MER31B LTR ERV1 -218 248 142 2 921 638 295 19 29 chr13 44120363 44120569 -76163743 + B4A SINE B4 3 206 -86 2 921 224 30 0 29 chr13 44120584 44120618 -76163694 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 921 444 289 156 71 chr13 44120735 44121018 -76163294 - MLT1A LTR MaLR -8 366 60 2 921 315 122 0 0 chr13 44121156 44121205 -76163107 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 921 324 0 0 0 chr13 44121427 44121463 -76162849 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 921 261 0 0 0 chr13 44121463 44121491 -76162821 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 921 1309 215 129 32 chr13 44124682 44125062 -76159250 - MTD LTR MaLR -2 417 1 2 921 206 264 120 40 chr13 44128303 44128378 -76155934 + MIRm SINE MIR 51 131 -145 2 921 1063 225 15 0 chr13 44128517 44128717 -76155595 + ID_B1 SINE B4 2 204 -20 2 921 668 223 6 0 chr13 44128757 44128932 -76155380 + GA-rich Low_complexity Low_complexity 2 177 0 2 921 341 346 89 58 chr13 44128934 44129158 -76155154 - LTR88b LTR Gypsy? -519 318 88 2 921 441 198 0 0 chr13 44129479 44129570 -76154742 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 2 921 400 282 0 0 chr13 44129696 44129774 -76154538 - Tigger7 DNA MER2_type -5 2486 2409 2 921 1748 291 71 32 chr13 44129786 44130346 -76153966 - Tigger7 DNA MER2_type -1897 594 13 2 921 1898 131 65 120 chr13 44130370 44130426 -76153886 - ORR1C1 LTR MaLR 0 378 338 2 921 350 0 44 0 chr13 44130426 44130471 -76153841 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2 921 1105 58 0 41 chr13 44130471 44130616 -76153696 - B1_Mus1 SINE Alu -9 139 1 2 921 1898 131 65 120 chr13 44130616 44130957 -76153355 - ORR1C1 LTR MaLR -41 337 3 2 921 1188 250 30 78 chr13 44131194 44131567 -76152745 + ORR1E LTR MaLR 3 357 -2 2 921 221 217 16 48 chr13 44132285 44132348 -76151964 - PB1D10 SINE Alu -2 115 55 2 921 666 250 58 54 chr13 44132885 44133109 -76151203 + RMER15 LTR ERVL 337 561 -14 2 921 1038 147 120 5 chr13 44135474 44135665 -76148647 + B3 SINE B2 2 214 -2 2 921 184 374 12 0 chr13 44135751 44135834 -76148478 + L2c LINE L2 3235 3318 -69 2 921 24 0 0 0 chr13 44135836 44135860 -76148452 + AT_rich Low_complexity Low_complexity 1 24 0 2 921 712 121 0 34 chr13 44135980 44136126 -76148186 + CT-rich Low_complexity Low_complexity 1 141 0 2 921 525 156 0 0 chr13 44136502 44136598 -76147714 + (TGGA)n Simple_repeat Simple_repeat 4 99 0 2 921 868 304 71 8 chr13 44137038 44137293 -76147019 + B4 SINE B4 1 271 -21 2 921 478 295 43 49 chr13 44137663 44137827 -76146485 - RSINE1 SINE B4 0 165 3 2 921 655 238 50 1 chr13 44138118 44138259 -76146053 + B3 SINE B2 1 146 -70 2 921 315 0 0 0 chr13 44138259 44138294 -76146018 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 921 524 269 42 74 chr13 44138294 44138341 -76145971 + B2_Mm2 SINE B2 132 183 -12 2 921 201 315 51 4 chr13 44138368 44138448 -76145864 - MIR SINE MIR -144 124 40 2 921 244 25 0 70 chr13 44138792 44138835 -76145477 + (GGGAGA)n Simple_repeat Simple_repeat 2 41 0 2 921 237 273 57 0 chr13 44138975 44139063 -76145249 + CT-rich Low_complexity Low_complexity 1 93 0 2 921 216 346 110 12 chr13 44140583 44140604 -76143708 + B4A SINE B4 57 85 -207 2 921 399 255 52 26 chr13 44140604 44140745 -76143567 + PB1D10 SINE Alu 1 135 -12 2 921 420 244 91 50 chr13 44142396 44142517 -76141795 + RSINE1 SINE B4 4 129 -36 2 921 688 303 41 65 chr13 44143891 44144258 -76140054 - ORR1E LTR MaLR -1 358 1 2 921 249 57 0 0 chr13 44144274 44144309 -76140003 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 2 921 1109 181 24 14 chr13 44144310 44144517 -76139795 + ORR1D1 LTR MaLR 164 372 -2 2 921 337 121 14 43 chr13 44144807 44144876 -76139436 + L1M5 LINE L1 2990 3056 -3090 2 921 267 210 65 0 chr13 44144886 44144948 -76139364 - LTR16C LTR ERVL -4 485 420 2 921 1127 268 42 69 chr13 44144960 44145337 -76138975 - MLT1B LTR MaLR -11 379 13 2 921 207 0 0 0 chr13 44145660 44145683 -76138629 + (T)n Simple_repeat Simple_repeat 1 23 0 2 921 1526 283 115 30 chr13 44145921 44146584 -76137728 + Lx8 LINE L1 6735 7453 -20 2 921 223 232 54 0 chr13 44146584 44146640 -76137672 + (TATATG)n Simple_repeat Simple_repeat 4 62 0 2 921 4363 274 77 38 chr13 44146754 44147790 -76136522 + ERVL-B4-int LTR ERVL 1698 2758 -2956 2 921 207 0 0 0 chr13 44147790 44147813 -76136499 + (CACAA)n Simple_repeat Simple_repeat 4 26 0 2 921 4363 274 77 38 chr13 44147813 44148211 -76136101 + ERVL-B4-int LTR ERVL 2759 3189 -2525 2 921 195 129 0 0 chr13 44148211 44148242 -76136070 + (TTGTG)n Simple_repeat Simple_repeat 4 34 0 2 921 2769 266 68 13 chr13 44148346 44149164 -76135148 + ERVL-B4-int LTR ERVL 4506 5368 -346 2 921 212 301 68 14 chr13 44149191 44149265 -76135047 - L3 LINE CR1 -3487 1002 925 2 921 367 328 57 36 chr13 44149529 44149722 -76134590 - MLT1C LTR MaLR -46 421 225 2 921 600 119 0 0 chr13 44149870 44149979 -76134333 + (TC)n Simple_repeat Simple_repeat 1 109 0 2 921 543 220 25 17 chr13 44150708 44150828 -76133484 + B1F SINE Alu 14 134 -15 2 921 410 53 0 17 chr13 44152648 44152706 -76131606 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 921 186 156 0 0 chr13 44153155 44153200 -76131112 + GA-rich Low_complexity Low_complexity 2 46 0 2 921 1502 58 5 10 chr13 44153269 44153461 -76130851 - B2_Mm1a SINE B2 -2 191 1 2 921 404 337 23 46 chr13 44153804 44153978 -76130334 - MLT1C LTR MaLR -18 449 280 2 921 472 275 42 14 chr13 44154172 44154316 -76129996 - RSINE1 SINE B4 -14 151 4 2 921 233 288 0 0 chr13 44154326 44154385 -76129927 - MLT1C LTR MaLR -304 86 28 2 921 23 33 0 0 chr13 44154531 44154561 -76129751 + AT_rich Low_complexity Low_complexity 1 30 0 2 921 334 177 130 37 chr13 44154573 44154673 -76129639 - B2_Mm2 SINE B2 -107 109 2 2 921 878 141 135 0 chr13 44154673 44154829 -76129483 - B2_Mm1t SINE B2 -14 179 3 2 921 947 262 65 36 chr13 44154831 44155140 -76129172 + MTEb LTR MaLR 59 376 -3 2 921 571 289 7 7 chr13 44155169 44155322 -76128990 - MLT2C2 LTR ERVL -298 166 14 2 921 180 0 0 0 chr13 44155415 44155435 -76128877 + (T)n Simple_repeat Simple_repeat 1 20 0 2 921 1099 82 119 6 chr13 44155690 44155849 -76128463 + B2_Mm2 SINE B2 1 177 -18 2 921 876 69 0 0 chr13 44155855 44155971 -76128341 + (GAAA)n Simple_repeat Simple_repeat 1 116 0 2 921 286 299 61 30 chr13 44156149 44156280 -76128032 + MLT1A1 LTR MaLR 268 402 -6 2 921 248 306 62 124 chr13 44156344 44156532 -76127780 + MER34A LTR ERV1 4 180 -391 2 921 433 196 22 0 chr13 44156653 44156745 -76127567 + MER34A1 LTR ERV1 421 514 -73 2 921 468 0 0 0 chr13 44157083 44157135 -76127177 + (A)n Simple_repeat Simple_repeat 1 52 0 2 921 503 226 0 42 chr13 44159126 44159256 -76125056 + B1_Mur1 SINE Alu 1 120 0 2 921 305 266 0 71 chr13 44159260 44159345 -76124967 + L1MEf LINE L1 1990 2068 -4132 2 921 323 98 16 0 chr13 44159962 44160023 -76124289 + (TC)n Simple_repeat Simple_repeat 2 63 0 2 921 378 0 0 0 chr13 44160025 44160067 -76124245 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 921 809 275 69 82 chr13 44162184 44162560 -76121752 - MLT1A LTR MaLR -2 372 2 2 921 233 211 0 19 chr13 44162678 44162731 -76121581 - L1M3 LINE L1 -2010 4130 4079 2 921 389 292 103 63 chr13 44164841 44165192 -76119120 - L1ME3A LINE L1 -3 6170 5806 2 921 611 326 56 30 chr13 44165364 44165630 -76118682 + B4A SINE B4 2 274 -18 2 921 209 139 23 0 chr13 44165651 44165694 -76118618 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 921 362 318 9 45 chr13 44165866 44165978 -76118334 + MER58A DNA MER1_type 3 110 -114 2 921 293 337 118 19 chr13 44166055 44166267 -76118045 - L1ME3A LINE L1 -1098 5048 4816 2 921 247 289 51 126 chr13 44166428 44166721 -76117591 - L1ME3A LINE L1 -1464 4682 4412 2 921 223 312 17 41 chr13 44166995 44167127 -76117185 + MIR SINE MIR 22 145 -63 2 921 594 254 70 30 chr13 44168033 44168232 -76116080 - MLT1A1 LTR MaLR -22 386 180 2 921 537 16 0 0 chr13 44168369 44168431 -76115881 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 921 186 209 0 0 chr13 44169577 44169620 -76114692 + (CAG)n Simple_repeat Simple_repeat 1 43 0 2 921 183 80 0 0 chr13 44169954 44169979 -76114333 + (TTC)n Simple_repeat Simple_repeat 2 26 0 2 921 242 395 43 27 chr13 44170072 44170257 -76114055 + MIR3 SINE MIR 8 195 -13 2 921 914 346 34 25 chr13 44170492 44170933 -76113379 + MER34A LTR ERV1 7 451 -120 2 921 256 175 16 16 chr13 44170937 44171001 -76113311 + GA-rich Low_complexity Low_complexity 4 67 0 2 921 224 100 0 24 chr13 44171128 44171169 -76113143 + (TTTC)n Simple_repeat Simple_repeat 4 43 0 2 922 2286 278 111 12 chr13 44173349 44174081 -76110231 + MER54A LTR ERVL 1 804 -97 3 922 465 270 15 25 chr13 44174084 44174233 -76110079 - MTEa LTR MaLR -7 372 218 3 922 738 286 28 59 chr13 44174404 44174727 -76109585 + MER89 LTR ERV1 3 315 -244 3 922 319 334 76 26 chr13 44175112 44175451 -76108861 + MER110 LTR ERV1 60 451 -40 3 922 441 0 0 0 chr13 44175748 44175797 -76108515 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 922 2214 97 25 3 chr13 44175802 44176123 -76108189 + ORR1A4 LTR MaLR 2 329 0 3 922 234 56 28 0 chr13 44176896 44176932 -76107380 + ORR1D1 LTR MaLR 1 37 -347 3 922 1279 51 22 0 chr13 44176925 44177103 -76107209 + B2_Mm2 SINE B2 14 195 0 3 922 843 167 18 6 chr13 44177109 44177272 -76107040 + ORR1D1 LTR MaLR 17 181 -193 3 922 849 164 61 23 chr13 44177294 44177513 -76106799 + ORR1D1 LTR MaLR 149 374 0 3 922 183 80 0 0 chr13 44177584 44177609 -76106703 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 3 922 22 0 0 0 chr13 44177886 44177908 -76106404 + AT_rich Low_complexity Low_complexity 1 22 0 3 922 225 94 0 0 chr13 44178013 44178045 -76106267 + (T)n Simple_repeat Simple_repeat 1 32 0 3 922 354 98 0 0 chr13 44179102 44179153 -76105159 + (CATA)n Simple_repeat Simple_repeat 2 52 0 3 922 218 333 141 7 chr13 44179405 44179547 -76104765 - MIR SINE MIR -94 168 8 3 922 272 200 14 0 chr13 44179980 44180050 -76104262 + (TG)n Simple_repeat Simple_repeat 1 71 0 3 922 220 269 147 9 chr13 44181688 44181797 -76102515 - MIRb SINE MIR -144 124 1 3 922 679 268 9 51 chr13 44184061 44184277 -76100035 - ID_B1 SINE B4 -17 207 1 3 922 198 0 0 0 chr13 44185340 44185362 -76098950 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 3 922 1221 301 106 47 chr13 44185637 44186356 -76097956 + L1MB4 LINE L1 5392 6152 -28 3 922 824 294 4 16 chr13 44186553 44186802 -76097510 + MER2 DNA MER2_type 100 345 0 3 922 282 116 0 0 chr13 44187443 44187486 -76096826 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 3 922 315 49 0 0 chr13 44187688 44187729 -76096583 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 922 270 0 0 0 chr13 44187741 44187771 -76096541 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 3 922 184 312 88 28 chr13 44187891 44188072 -76096240 + MIR SINE MIR 4 195 -67 3 922 239 203 135 0 chr13 44188593 44188667 -76095645 + MTEb LTR MaLR 294 377 -2 3 922 227 252 187 0 chr13 44188789 44188896 -76095416 - L1M2 LINE L1 -1279 4864 4738 3 922 265 170 0 0 chr13 44189051 44189098 -76095214 - L1MD LINE L1 -1613 4533 4487 3 922 606 323 123 42 chr13 44189543 44190260 -76094052 - L1MEc LINE L1 -2745 3574 2800 3 922 618 292 158 29 chr13 44190409 44190719 -76093593 - ORR1E LTR MaLR -6 353 4 3 922 986 204 27 18 chr13 44190891 44191111 -76093201 - Lx9 LINE L1 -446 7198 6977 3 922 235 273 12 38 chr13 44191174 44191254 -76093058 - L1MEc LINE L1 -5926 474 397 3 922 244 339 128 21 chr13 44191260 44191447 -76092865 - L1MEc LINE L1 -6155 245 39 3 922 216 339 43 17 chr13 44193289 44193406 -76090906 - MIRc SINE MIR -64 204 85 3 922 444 301 18 117 chr13 44193568 44193790 -76090522 + B4A SINE B4 77 276 -16 3 922 183 167 0 0 chr13 44193837 44193879 -76090433 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 922 302 254 15 0 chr13 44193911 44193978 -76090334 + ID4 SINE ID 3 70 -13 3 922 378 0 0 0 chr13 44193981 44194023 -76090289 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 922 288 0 0 0 chr13 44194023 44194054 -76090258 + (GA)n Simple_repeat Simple_repeat 2 33 0 3 922 324 0 0 0 chr13 44195083 44195119 -76089193 + (CAG)n Simple_repeat Simple_repeat 3 38 0 3 922 369 0 0 0 chr13 44195376 44195417 -76088895 + (TAA)n Simple_repeat Simple_repeat 3 43 0 3 922 613 329 112 37 chr13 44196944 44197374 -76086938 + MER88 LTR ERVL 1 462 -2 3 922 358 230 23 11 chr13 44198125 44198213 -76086099 - Lx9 LINE L1 -259 7385 7297 3 922 396 0 0 0 chr13 44198347 44198391 -76085921 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 922 333 0 0 0 chr13 44198391 44198427 -76085885 + (GA)n Simple_repeat Simple_repeat 1 37 0 3 922 421 325 16 24 chr13 44198433 44198556 -76085756 - RSINE1 SINE B4 -13 152 31 3 922 540 294 92 18 chr13 44199432 44199650 -76084662 - MLT1F LTR MaLR -314 234 1 3 922 383 315 14 0 chr13 44199940 44200083 -76084229 - MER2 DNA MER2_type -6 339 195 3 922 289 339 88 39 chr13 44200072 44200253 -76084059 - B3A SINE B2 -3 195 6 3 922 341 279 48 116 chr13 44200156 44200407 -76083905 - MER2 DNA MER2_type -21 324 91 3 922 324 0 0 0 chr13 44202248 44202284 -76082028 + (TC)n Simple_repeat Simple_repeat 1 36 0 3 922 297 0 0 0 chr13 44202284 44202316 -76081996 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 922 348 245 146 26 chr13 44202437 44202508 -76081804 - B4 SINE B4 -117 175 101 3 922 302 98 20 0 chr13 44202508 44202559 -76081753 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 3 922 348 245 146 26 chr13 44202559 44202638 -76081674 - B4 SINE B4 -192 100 7 3 922 26 0 0 0 chr13 44203612 44203638 -76080674 + AT_rich Low_complexity Low_complexity 1 26 0 3 922 486 311 117 0 chr13 44206466 44206672 -76077640 - MLT2B4 LTR ERVL -281 275 46 3 922 375 262 220 34 chr13 44207436 44207782 -76076530 - MLT2B2 LTR ERVL -108 407 11 3 922 370 364 41 37 chr13 44207954 44208199 -76076113 - L1M5 LINE L1 -2870 3276 3031 3 922 455 288 72 46 chr13 44208287 44208524 -76075788 + HAL1 LINE L1 1441 1683 -824 3 922 327 307 42 30 chr13 44208735 44208903 -76075409 + HAL1 LINE L1 2046 2215 -292 3 922 225 0 0 0 chr13 44209008 44209033 -76075279 + (CAAAAA)n Simple_repeat Simple_repeat 5 29 0 3 922 214 196 54 0 chr13 44209207 44209263 -76075049 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 922 256 114 11 64 chr13 44209266 44209360 -76074952 + (TATAA)n Simple_repeat Simple_repeat 5 93 0 3 922 247 85 43 0 chr13 44209540 44209587 -76074725 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 922 2400 222 19 41 chr13 44209646 44210233 -76074079 - Lx9 LINE L1 -313 7331 6758 3 922 1032 148 50 0 chr13 44210517 44210699 -76073613 + RMER19B LTR ERVK 700 890 -12 3 922 225 65 0 0 chr13 44211387 44211418 -76072894 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 3 922 214 195 0 24 chr13 44211818 44211860 -76072452 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 922 634 254 88 36 chr13 44212248 44212522 -76071790 - L1MA5 LINE L1 -5 6295 6008 3 922 188 364 47 0 chr13 44213913 44214042 -76070270 - MIRb SINE MIR -109 159 25 3 922 186 43 0 0 chr13 44214621 44214644 -76069668 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 922 435 237 219 10 chr13 44215262 44215458 -76068854 + MLT1B LTR MaLR 143 379 -11 3 922 432 0 0 0 chr13 44215487 44215535 -76068777 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 922 450 0 0 0 chr13 44215596 44215646 -76068666 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 922 929 217 137 8 chr13 44216243 44216498 -76067814 - B4A SINE B4 0 292 5 3 922 231 259 0 0 chr13 44216833 44216887 -76067425 + G-rich Low_complexity Low_complexity 5 58 0 3 922 1914 284 42 24 chr13 44217587 44218259 -76066053 - Lx9 LINE L1 -212 7432 6749 3 922 483 194 0 0 chr13 44218830 44218938 -76065374 + (CAT)n Simple_repeat Simple_repeat 1 108 0 3 922 226 217 0 21 chr13 44219340 44219387 -76064925 - MLT1A1 LTR MaLR 0 408 363 3 922 255 206 318 0 chr13 44219387 44219494 -76064818 - MLT1A1 LTR MaLR -19 389 249 3 922 258 81 0 0 chr13 44219767 44219804 -76064508 + (GGGA)n Simple_repeat Simple_repeat 1 37 0 3 922 302 270 25 75 chr13 44219982 44220102 -76064210 - PB1D10 SINE Alu -1 116 3 3 922 439 264 56 8 chr13 44220811 44220937 -76063375 - MER20 DNA MER1_type -9 210 79 3 922 300 53 0 0 chr13 44221060 44221098 -76063214 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3 922 231 265 0 0 chr13 44222886 44222935 -76061377 + MIR SINE MIR 112 160 -102 3 922 547 317 72 81 chr13 44222950 44223310 -76061002 - MLT1B LTR MaLR -22 368 12 3 922 342 310 73 55 chr13 44223310 44223474 -76060838 - MIR SINE MIR -76 186 20 3 922 319 264 110 26 chr13 44223756 44223863 -76060449 + PB1D10 SINE Alu 21 144 -5 3 922 441 279 77 44 chr13 44223902 44224109 -76060203 - MIR SINE MIR -40 228 13 3 922 25 31 0 0 chr13 44224725 44224757 -76059555 + AT_rich Low_complexity Low_complexity 1 32 0 3 922 195 125 0 0 chr13 44224966 44225006 -76059306 + (TA)n Simple_repeat Simple_repeat 1 40 0 3 922 419 291 174 42 chr13 44225774 44226039 -76058273 - RMER15 LTR ERVL -15 560 261 3 922 439 275 56 7 chr13 44226206 44226222 -76058090 + RSINE1 SINE B4 3 18 -147 3 922 297 0 0 0 chr13 44226222 44226255 -76058057 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 922 439 275 56 7 chr13 44226255 44226381 -76057931 + RSINE1 SINE B4 19 152 -13 3 922 181 333 0 0 chr13 44226565 44226610 -76057702 - L2b LINE L2 -3 3372 3328 3 922 3051 78 8 0 chr13 44226861 44227258 -76057054 - MTB LTR MaLR 0 400 1 3 922 267 233 109 25 chr13 44227704 44227823 -76056489 + MIRc SINE MIR 16 144 -124 3 922 315 71 0 0 chr13 44227823 44227865 -76056447 + (A)n Simple_repeat Simple_repeat 1 42 0 3 922 278 261 3 113 chr13 44228426 44228552 -76055760 - MIR SINE MIR -123 145 34 3 922 405 86 0 0 chr13 44228641 44228699 -76055613 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 3 922 261 213 12 74 chr13 44229207 44229288 -76055024 + ID4 SINE ID 2 77 -6 3 922 414 134 0 0 chr13 44229303 44229370 -76054942 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 3 922 232 196 18 0 chr13 44229605 44229661 -76054651 + A-rich Low_complexity Low_complexity 2 58 0 3 922 279 179 0 0 chr13 44230019 44230086 -76054226 + GA-rich Low_complexity Low_complexity 2 68 0 3 922 843 269 0 68 chr13 44230111 44230346 -76053966 + ID_B1 SINE B4 1 219 -5 3 922 264 185 27 27 chr13 44230351 44230462 -76053850 + GA-rich Low_complexity Low_complexity 2 112 0 3 922 330 302 58 0 chr13 44230485 44230571 -76053741 - RMER30 DNA MER1_type -1 201 111 3 922 333 0 0 0 chr13 44230571 44230608 -76053704 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 922 274 236 95 27 chr13 44230608 44230682 -76053630 - RMER30 DNA MER1_type -122 80 2 3 922 637 169 15 0 chr13 44233424 44233560 -76050752 + GA-rich Low_complexity Low_complexity 1 138 0 4 922 346 231 92 76 chr13 44235048 44235179 -76049133 + ORR1E LTR MaLR 1 133 -226 4 922 756 276 150 21 chr13 44235740 44236073 -76048239 + MTEb LTR MaLR 2 377 -2 4 922 375 256 46 99 chr13 44237922 44238074 -76046238 + B4A SINE B4 7 150 -142 4 922 474 136 25 0 chr13 44238009 44238090 -76046222 + PB1D9 SINE Alu 38 120 0 4 922 348 43 0 0 chr13 44238092 44238138 -76046174 + (CAAAAA)n Simple_repeat Simple_repeat 3 48 0 4 922 586 314 110 0 chr13 44238148 44238258 -76046054 + B4 SINE B4 81 197 -95 4 922 330 45 0 0 chr13 44238258 44238302 -76046010 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 922 586 314 110 0 chr13 44238302 44238382 -76045930 + B4 SINE B4 198 291 -1 4 922 423 296 205 24 chr13 44238950 44239321 -76044991 + L1MB2 LINE L1 5732 6169 -2 4 922 3063 91 140 28 chr13 44239598 44240105 -76044207 + LTRIS2 LTR ERV1 1 564 0 4 922 303 311 107 67 chr13 44240352 44240576 -76043736 + HERV16-int LTR ERVL 618 850 -4146 4 922 342 0 0 0 chr13 44240720 44240758 -76043554 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 922 779 279 153 1 chr13 44241097 44241358 -76042954 + MTE2b LTR MaLR 1 311 -68 4 922 2208 143 58 6 chr13 44241886 44242245 -76042067 + ORR1C1 LTR MaLR 1 378 0 4 922 298 0 48 0 chr13 44242274 44242316 -76041996 + (TTG)n Simple_repeat Simple_repeat 2 45 0 4 922 1176 68 0 0 chr13 44242686 44242832 -76041480 + B1_Mus1 SINE Alu 3 148 0 4 922 1552 246 40 17 chr13 44243263 44243610 -76040702 + MTEb LTR MaLR 1 355 -24 4 922 180 152 0 0 chr13 44243627 44243660 -76040652 + A-rich Low_complexity Low_complexity 1 33 0 4 922 351 0 0 0 chr13 44244015 44244054 -76040258 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 922 403 294 40 89 chr13 44244424 44244772 -76039540 + RMER15 LTR ERVL 1 445 -130 4 922 261 83 0 0 chr13 44245207 44245243 -76039069 + (TCC)n Simple_repeat Simple_repeat 1 36 0 4 922 362 108 15 0 chr13 44245260 44245325 -76038987 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 922 841 267 0 0 chr13 44245326 44245491 -76038821 - B3 SINE B2 -51 165 1 4 922 623 312 0 12 chr13 44245491 44245652 -76038660 - MTEa LTR MaLR -200 179 21 4 922 409 298 134 23 chr13 44247754 44247926 -76036386 - MIR SINE MIR -9 253 63 4 922 329 145 0 16 chr13 44248150 44248213 -76036099 + GA-rich Low_complexity Low_complexity 2 63 0 4 922 240 285 169 0 chr13 44248307 44248437 -76035875 + MER63A DNA AcHobo 7 158 -52 4 922 369 0 0 0 chr13 44248438 44248479 -76035833 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 922 207 268 53 18 chr13 44248910 44248967 -76035345 + MIRm SINE MIR 118 176 -100 4 922 982 246 68 77 chr13 44249067 44249419 -76034893 - ORR1E LTR MaLR -8 351 3 4 922 195 121 121 0 chr13 44250515 44250548 -76033764 + L2a LINE L2 3384 3420 -6 4 922 436 344 82 12 chr13 44250579 44250823 -76033489 - L1MEd LINE L1 -3016 3130 2870 4 922 789 277 0 6 chr13 44250871 44251038 -76033274 + B3 SINE B2 27 192 -24 4 922 1062 24 8 0 chr13 44251034 44251161 -76033151 + B1_Mm SINE Alu 19 146 -1 4 922 228 196 39 19 chr13 44251349 44251401 -76032911 - ID4_ SINE ID -4 79 27 4 922 930 294 94 53 chr13 44251693 44252165 -76032147 - RMER13A LTR ERVK -101 526 30 4 922 751 274 5 58 chr13 44252211 44252401 -76031911 + B4A SINE B4 106 285 -7 4 922 372 59 0 0 chr13 44252403 44252454 -76031858 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 922 275 229 12 35 chr13 44253141 44253227 -76031085 - L1MEd LINE L1 -4914 1222 1139 4 922 333 266 64 96 chr13 44253324 44253511 -76030801 - L1MEd LINE L1 -5014 1122 942 4 922 465 111 44 0 chr13 44253580 44253670 -76030642 + CT-rich Low_complexity Low_complexity 2 95 0 4 922 490 258 92 15 chr13 44254131 44254246 -76030066 + B1F SINE Alu 9 132 -17 4 922 320 60 0 39 chr13 44254246 44254298 -76030014 + (CAAA)n Simple_repeat Simple_repeat 3 52 0 4 922 490 258 92 15 chr13 44254298 44254312 -76030000 + B1F SINE Alu 133 148 -1 4 922 692 285 69 13 chr13 44254433 44254664 -76029648 - MER44A DNA MER2_type -95 244 1 4 922 263 316 91 56 chr13 44255062 44255260 -76029052 - MER33 DNA MER1_type -44 280 76 4 922 521 277 173 11 chr13 44255246 44255425 -76028887 - B4 SINE B4 -1 291 84 4 922 201 74 0 0 chr13 44255425 44255452 -76028860 + (A)n Simple_repeat Simple_repeat 1 27 0 4 922 396 229 114 8 chr13 44255530 44255653 -76028659 - MER33 DNA MER1_type -188 136 1 4 922 441 328 69 91 chr13 44256096 44256415 -76027897 - ORR1D2 LTR MaLR 0 370 59 4 922 309 340 7 78 chr13 44256463 44256616 -76027696 - MLT1F2 LTR MaLR -311 249 108 4 922 9112 6 0 0 chr13 44257164 44258736 -76025576 - L1Md_A LINE L1 0 6582 5011 4 922 3265 59 3 0 chr13 44259781 44260172 -76024140 + MTA_Mm LTR MaLR 1 392 -4 4 922 812 277 21 11 chr13 44261327 44261513 -76022799 + MER70A LTR ERVL 285 472 0 4 922 424 289 66 60 chr13 44261569 44261735 -76022577 - LTR33 LTR ERVL -295 220 54 4 922 971 278 133 32 chr13 44261813 44262268 -76022044 + L1MA4 LINE L1 5282 5783 -517 4 922 330 26 0 0 chr13 44262268 44262307 -76022005 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 922 971 278 133 32 chr13 44262307 44262353 -76021959 + L1MA4 LINE L1 5784 5833 -467 4 922 306 291 0 0 chr13 44262481 44262560 -76021752 + L1MA4 LINE L1 6221 6299 -1 4 922 315 335 11 58 chr13 44262757 44262931 -76021381 + HAL1 LINE L1 1989 2154 -353 4 922 433 354 21 0 chr13 44262978 44263122 -76021190 + MLT1F2 LTR MaLR 412 558 -2 4 922 557 287 23 23 chr13 44264223 44264398 -76019914 - HAL1-2a_MD LINE L1 -537 2487 2313 4 922 4386 211 94 51 chr13 44264409 44265671 -76018641 - RMER1A Other Other -5 1025 7 4 922 198 71 0 0 chr13 44266385 44266413 -76017899 + (CAA)n Simple_repeat Simple_repeat 2 29 0 4 922 385 257 39 29 chr13 44267358 44267462 -76016850 + PB1D7 SINE Alu 15 119 -1 4 922 318 289 48 0 chr13 44267761 44267865 -76016447 + PB1D10 SINE Alu 1 109 -8 4 922 501 255 0 0 chr13 44267866 44268007 -76016305 + GA-rich Low_complexity Low_complexity 1 141 0 4 922 311 195 24 0 chr13 44267990 44268072 -76016240 + G-rich Low_complexity Low_complexity 5 88 0 4 922 1030 144 98 15 chr13 44268444 44268649 -76015663 + URR1A DNA MER1_type 5 226 0 4 922 381 320 47 23 chr13 44268972 44269100 -76015212 - ORR1E LTR MaLR -228 131 1 4 922 1736 233 88 8 chr13 44269213 44269598 -76014714 - MTD LTR MaLR -3 416 1 4 922 225 178 0 22 chr13 44269650 44269696 -76014616 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 922 238 333 48 54 chr13 44270862 44271030 -76013282 + MIRc SINE MIR 102 268 0 4 922 967 204 19 14 chr13 44271360 44271569 -76012743 + B3 SINE B2 1 210 -6 4 922 294 261 259 8 chr13 44271941 44272072 -76012240 + RSINE1 SINE B4 2 165 0 4 922 420 256 4 19 chr13 44272125 44272396 -76011916 + (CA)n Simple_repeat Simple_repeat 1 266 0 4 922 236 270 29 39 chr13 44272730 44272834 -76011478 - MTEb LTR MaLR 0 379 277 4 922 337 271 20 30 chr13 44274024 44274123 -76010189 + ID_B1 SINE B4 124 221 -3 4 922 1060 328 79 36 chr13 44274264 44274757 -76009555 + MLT1F1 LTR MaLR 48 561 -8 4 922 219 152 0 0 chr13 44274800 44274846 -76009466 + CT-rich Low_complexity Low_complexity 2 47 0 4 922 8993 135 31 13 chr13 44274939 44276470 -76007842 + Lx5 LINE L1 5487 7050 0 4 922 381 207 0 0 chr13 44277259 44277341 -76006971 + (TG)n Simple_repeat Simple_repeat 1 82 0 4 922 391 116 14 28 chr13 44277341 44277364 -76006948 - B4A SINE B4 0 292 271 4 922 351 0 0 0 chr13 44277364 44277403 -76006909 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 922 391 116 14 28 chr13 44277403 44277450 -76006862 - B4A SINE B4 -22 270 223 4 922 215 324 14 27 chr13 44277609 44277682 -76006630 - B4A SINE B4 -216 76 5 4 922 180 0 0 0 chr13 44278580 44278600 -76005712 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 922 270 363 72 72 chr13 44279231 44279715 -76004597 + L2 LINE L2 2095 2578 -841 4 922 237 65 0 0 chr13 44280409 44280440 -76003872 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 922 1500 143 58 80 chr13 44280591 44280785 -76003527 - ORR1C2 LTR MaLR 0 384 181 4 922 213 65 0 0 chr13 44280785 44280816 -76003496 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 922 1500 143 58 80 chr13 44280816 44280933 -76003379 - ORR1C2 LTR MaLR -204 180 81 4 922 1224 61 0 0 chr13 44282246 44282394 -76001918 + B1_Mus1 SINE Alu 1 148 0 4 922 201 39 0 0 chr13 44282394 44282420 -76001892 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 922 21 0 0 0 chr13 44283377 44283398 -76000914 + AT_rich Low_complexity Low_complexity 1 21 0 4 922 2500 92 3 0 chr13 44283429 44283754 -76000558 - ORR1A2 LTR MaLR 0 327 2 4 922 1411 250 72 31 chr13 44283869 44284257 -76000055 - MTD LTR MaLR 0 419 16 4 922 690 154 0 0 chr13 44284264 44284413 -75999899 + GA-rich Low_complexity Low_complexity 2 150 0 4 922 3669 259 41 31 chr13 44284417 44285514 -75998798 - Lx9 LINE L1 -201 7443 6189 4 922 239 104 21 0 chr13 44285514 44285562 -75998750 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 4 922 1797 345 70 31 chr13 44285562 44285796 -75998516 - Lx9 LINE L1 -1285 6188 5930 4 922 517 301 79 30 chr13 44285855 44286057 -75998255 + ID_B1 SINE B4 6 217 -7 4 922 381 22 0 0 chr13 44286066 44286112 -75998200 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 922 180 0 0 0 chr13 44287100 44287120 -75997192 + (A)n Simple_repeat Simple_repeat 1 20 0 4 922 234 337 30 20 chr13 44287404 44287504 -75996808 + MLT1K LTR MaLR 1 101 -494 4 922 582 298 112 34 chr13 44288192 44288397 -75995915 - MLT1F2 LTR MaLR 0 560 340 4 922 339 355 30 18 chr13 44288472 44288641 -75995671 - MLT1F2 LTR MaLR -389 171 1 4 922 411 237 0 0 chr13 44288993 44289069 -75995243 - ID_B1 SINE B4 -1 223 148 4 922 309 367 18 0 chr13 44289322 44289431 -75994881 - Charlie1 DNA MER1_type -2669 112 2 4 922 301 250 22 33 chr13 44289713 44289804 -75994508 + HAL1-2a_MD LINE L1 2387 2476 -548 5 922 281 105 0 50 chr13 44290681 44290741 -75993571 + A-rich Low_complexity Low_complexity 1 57 0 5 922 228 282 82 98 chr13 44291404 44291526 -75992786 - RSINE1 SINE B4 0 165 46 5 922 241 329 14 14 chr13 44291527 44291598 -75992714 - RSINE1 SINE B4 -79 86 16 5 922 252 0 0 0 chr13 44291628 44291656 -75992656 + (CAA)n Simple_repeat Simple_repeat 3 30 0 5 922 295 252 98 11 chr13 44292121 44292222 -75992090 + PB1D10 SINE Alu 30 129 -20 5 922 1058 236 35 52 chr13 44292629 44292973 -75991339 - RLTR15 LTR ERVK -16 343 6 5 922 608 271 204 38 chr13 44292971 44293285 -75991027 + LTR48B LTR ERV1 164 529 -115 5 922 474 265 29 0 chr13 44293878 44294014 -75990298 - B4A SINE B4 -152 140 1 5 922 237 271 0 17 chr13 44294887 44294947 -75989365 + MER5A1 DNA MER1_type 102 160 -6 5 922 288 0 0 0 chr13 44295065 44295097 -75989215 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 922 1046 254 21 38 chr13 44295110 44295397 -75988915 - B4 SINE B4 -10 282 1 5 922 260 170 0 60 chr13 44296413 44296463 -75987849 + MIR3 SINE MIR 146 192 -16 5 922 353 269 25 42 chr13 44296780 44296900 -75987412 + RMER15 LTR ERVL 444 561 -14 5 922 688 231 19 16 chr13 44297206 44297368 -75986944 - ID_B1 SINE B4 -25 267 104 5 922 2573 132 10 5 chr13 44297955 44298351 -75985961 + Lx3B LINE L1 6575 6972 -1 5 922 306 0 0 0 chr13 44298358 44298392 -75985920 + (TAA)n Simple_repeat Simple_repeat 1 34 0 5 922 1112 62 6 76 chr13 44298496 44298654 -75985658 - B1_Mm SINE Alu 0 147 1 5 922 351 265 26 111 chr13 44298655 44298808 -75985504 + MLT1A LTR MaLR 38 177 -197 5 922 337 316 35 0 chr13 44298983 44299097 -75985215 - MLT1D LTR MaLR -383 122 5 5 922 254 332 41 25 chr13 44300976 44301120 -75983192 - MIRc SINE MIR -80 188 40 5 922 375 121 0 0 chr13 44301337 44301395 -75982917 + (CCCCCT)n Simple_repeat Simple_repeat 6 63 0 5 922 260 308 92 25 chr13 44301527 44301647 -75982665 - MIR SINE MIR -85 177 50 5 115 534 91 0 0 chr13 44302279 44302356 -75981956 + (CA)n Simple_repeat Simple_repeat 1 77 0 5 923 225 0 0 0 chr13 44302684 44302709 -75981603 + (GTTTG)n Simple_repeat Simple_repeat 2 26 0 5 923 192 364 62 35 chr13 44303393 44303538 -75980774 + MIR3 SINE MIR 22 170 -38 5 923 210 71 0 0 chr13 44304327 44304355 -75979957 + (GGA)n Simple_repeat Simple_repeat 3 30 0 5 923 270 0 0 0 chr13 44304406 44304436 -75979876 + (T)n Simple_repeat Simple_repeat 1 30 0 5 923 276 312 0 31 chr13 44305216 44305312 -75979000 + MER5A DNA MER1_type 2 94 -95 5 923 630 101 0 0 chr13 44306158 44306267 -75978045 + (ATTTG)n Simple_repeat Simple_repeat 1 109 0 5 923 826 272 44 5 chr13 44306271 44306474 -75977838 - ID_B1 SINE B4 -13 211 1 5 923 195 258 23 81 chr13 44307041 44307137 -75977175 - MIRb SINE MIR -17 251 151 5 923 567 119 8 16 chr13 44308219 44308347 -75975965 + (GA)n Simple_repeat Simple_repeat 2 128 0 5 923 518 268 99 54 chr13 44308769 44309029 -75975283 - MLT1B LTR MaLR -8 382 119 5 923 236 281 356 11 chr13 44309048 44309228 -75975084 - Tigger5 DNA MER2_type -13 2393 2152 5 923 405 226 39 19 chr13 44309271 44309375 -75974937 - MLT1B LTR MaLR -359 108 3 5 923 243 385 0 0 chr13 44309742 44309825 -75974487 - MIRb SINE MIR -8 260 178 5 923 215 263 139 20 chr13 44309872 44309973 -75974339 - MIR SINE MIR -32 230 118 5 923 180 0 0 0 chr13 44310156 44310176 -75974136 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 923 356 244 0 25 chr13 44310317 44310397 -75973915 + ID4 SINE ID 6 83 0 5 923 285 274 18 128 chr13 44310832 44310941 -75973371 + B4A SINE B4 76 172 -120 5 923 234 0 0 0 chr13 44311039 44311065 -75973247 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 923 504 0 0 0 chr13 44311403 44311459 -75972853 + (CAAAA)n Simple_repeat Simple_repeat 2 57 0 5 923 690 201 83 48 chr13 44311752 44311978 -75972334 - MamGypLTR1a LTR Gypsy -483 320 86 5 923 306 222 13 89 chr13 44312609 44312688 -75971624 - ID4 SINE ID -4 79 7 5 923 411 83 0 0 chr13 44312724 44312784 -75971528 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 923 1710 231 97 13 chr13 44312830 44313212 -75971100 - MTD LTR MaLR 0 419 6 5 923 429 281 0 20 chr13 44313212 44313310 -75971002 - PB1D10 SINE Alu -8 109 14 5 923 221 200 0 57 chr13 44313263 44313316 -75970996 - B4A SINE B4 -148 144 95 5 923 190 254 33 33 chr13 44314168 44314229 -75970083 - L2 LINE L2 -1577 1842 1782 5 923 538 246 20 34 chr13 44314625 44314772 -75969540 + B1F2 SINE Alu 1 145 -4 5 923 401 259 0 69 chr13 44314792 44314908 -75969404 - PB1D10 SINE Alu -5 112 5 5 923 494 295 40 13 chr13 44314934 44315085 -75969227 - RMER30 DNA MER1_type -1 201 47 5 923 304 274 167 37 chr13 44316112 44316328 -75967984 + L1MB4 LINE L1 5931 6174 -6 5 923 1322 281 86 22 chr13 44316422 44316876 -75967436 - MT2A LTR ERVL -15 518 36 5 923 483 138 138 0 chr13 44316908 44316995 -75967317 - URR1B DNA MER1_type -4 221 123 5 923 706 303 142 71 chr13 44318379 44318442 -75965870 + MLT2D LTR ERVL 20 90 -324 5 923 3324 54 2 10 chr13 44318442 44318852 -75965460 - MTB_Mm LTR MaLR 0 407 1 5 923 706 303 142 71 chr13 44318852 44319132 -75965180 + MLT2D LTR ERVL 91 388 -26 5 923 367 250 63 111 chr13 44319132 44319321 -75964991 + MLT1A1 LTR MaLR 1 180 -194 5 923 319 269 141 71 chr13 44319518 44319702 -75964610 - ORR1E LTR MaLR -162 197 1 5 923 371 316 101 14 chr13 44319714 44319852 -75964460 + MLT1A1 LTR MaLR 259 408 0 5 923 343 319 66 46 chr13 44320666 44320863 -75963449 + ORR1E LTR MaLR 90 290 -69 5 923 1027 244 54 0 chr13 44321391 44321649 -75962663 + B4A SINE B4 1 272 -20 5 923 22 0 0 0 chr13 44321679 44321701 -75962611 + AT_rich Low_complexity Low_complexity 1 22 0 5 923 222 37 0 0 chr13 44322344 44322371 -75961941 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 5 923 351 0 0 0 chr13 44322378 44322417 -75961895 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 5 923 209 184 0 0 chr13 44323155 44323193 -75961119 + (ATG)n Simple_repeat Simple_repeat 1 38 0 5 923 240 111 0 0 chr13 44323508 44323544 -75960768 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 923 747 184 2 6 chr13 44325344 44325832 -75958480 + (TG)n Simple_repeat Simple_repeat 1 485 0 5 923 243 297 44 126 chr13 44325907 44326042 -75958270 - B1_Mus1 SINE Alu -10 138 15 5 923 653 257 130 24 chr13 44325921 44326128 -75958184 - B4 SINE B4 -62 230 2 5 923 230 263 106 48 chr13 44326536 44326640 -75957672 - ORR1E LTR MaLR -223 136 27 5 923 603 226 36 8 chr13 44327245 44327382 -75956930 + B3A SINE B2 2 137 -56 5 923 21 0 0 0 chr13 44327887 44327908 -75956404 + GC_rich Low_complexity Low_complexity 1 21 0 5 923 1064 120 168 25 chr13 44328572 44328769 -75955543 - URR1B DNA MER1_type 0 225 1 5 923 461 206 0 21 chr13 44329692 44329786 -75954526 + ID_B1 SINE B4 86 177 -47 5 923 797 231 54 27 chr13 44329778 44330026 -75954286 - ORR1E LTR MaLR -127 243 1 5 923 442 291 248 17 chr13 44330173 44330407 -75953905 + B4A SINE B4 1 288 -4 5 923 310 305 53 0 chr13 44330581 44330676 -75953636 + PB1D10 SINE Alu 18 117 0 5 923 180 0 0 0 chr13 44331090 44331110 -75953202 + (TAGTG)n Simple_repeat Simple_repeat 1 20 0 5 923 309 26 0 0 chr13 44331112 44331150 -75953162 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 923 684 204 7 42 chr13 44332030 44332173 -75952139 - B1_Mur1 SINE Alu -11 138 1 5 923 680 279 108 0 chr13 44332199 44332403 -75951909 - MLT1D LTR MaLR 0 505 280 5 923 1190 188 9 9 chr13 44332420 44332645 -75951667 + URR1B DNA MER1_type 1 225 0 5 923 417 333 72 34 chr13 44332658 44332866 -75951446 - MLT1D LTR MaLR -289 216 1 5 923 460 297 90 102 chr13 44332943 44333277 -75951035 - ORR1E LTR MaLR -6 353 24 5 923 414 0 0 0 chr13 44333974 44334020 -75950292 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 923 746 251 21 5 chr13 44334099 44334287 -75950025 + ORR1E LTR MaLR 1 191 -168 5 923 254 135 0 37 chr13 44334287 44334341 -75949971 + CT-rich Low_complexity Low_complexity 2 53 0 5 923 253 212 242 17 chr13 44334378 44334498 -75949814 + ORR1E LTR MaLR 224 370 0 5 923 246 320 0 0 chr13 44335676 44335754 -75948558 + B3 SINE B2 8 85 -131 5 923 634 235 0 102 chr13 44335684 44335850 -75948462 + RSINE1 SINE B4 17 165 0 5 923 576 304 35 16 chr13 44335863 44336104 -75948208 + MER2 DNA MER2_type 53 302 -43 5 923 287 198 94 47 chr13 44336137 44336222 -75948090 - RSINE1 SINE B4 -49 116 28 5 923 24 0 0 0 chr13 44337094 44337118 -75947194 + AT_rich Low_complexity Low_complexity 1 24 0 5 923 577 258 104 31 chr13 44337439 44337631 -75946681 + B3 SINE B2 1 206 -10 5 923 293 264 2 7 chr13 44337884 44337961 -75946351 + L1MA4 LINE L1 5490 5567 -673 5 923 3750 67 154 0 chr13 44338020 44338526 -75945786 - MT2B2 LTR ERVL 0 584 1 5 923 212 143 0 0 chr13 44338887 44338922 -75945390 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 5 923 391 300 38 19 chr13 44338986 44339166 -75945146 + L1MA4 LINE L1 5749 5932 -368 5 923 1951 156 17 40 chr13 44339264 44339684 -75944628 + RMER17C LTR ERVK 1 410 0 5 923 2545 83 3 0 chr13 44339934 44340260 -75944052 - ORR1A2 LTR MaLR 0 327 1 5 923 234 0 0 0 chr13 44340978 44341004 -75943308 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 5 923 321 26 0 0 chr13 44341132 44341170 -75943142 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 923 678 237 11 34 chr13 44341415 44341590 -75942722 + ID_B1 SINE B4 3 173 -51 5 923 333 240 89 71 chr13 44341507 44341619 -75942693 + PB1 SINE Alu 12 125 -2 6 923 326 245 118 35 chr13 44341844 44341988 -75942324 + Tigger8 DNA MER2_type 206 361 -305 6 923 389 262 53 40 chr13 44342181 44342318 -75941994 + B3A SINE B2 42 181 -17 6 923 243 0 0 0 chr13 44342318 44342345 -75941967 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 923 389 262 53 40 chr13 44342345 44342358 -75941954 + B3A SINE B2 182 194 -4 6 923 510 308 82 0 chr13 44342777 44342959 -75941353 + MER20 DNA MER1_type 1 197 -22 6 923 372 300 32 43 chr13 44343153 44343341 -75940971 - MIR SINE MIR 0 262 77 6 923 230 284 39 10 chr13 44344542 44344645 -75939667 - L1ME3A LINE L1 -19 6154 6049 6 923 656 138 9 0 chr13 44344944 44345060 -75939252 + (TG)n Simple_repeat Simple_repeat 2 118 0 6 923 1163 169 0 5 chr13 44345274 44345482 -75938830 - URR1B DNA MER1_type -18 207 1 6 923 257 284 62 0 chr13 44345777 44345858 -75938454 - L1ME3A LINE L1 -266 5907 5822 6 923 581 218 69 29 chr13 44349656 44349831 -75934481 + B3A SINE B2 1 182 -16 6 923 1712 300 69 66 chr13 44349882 44350161 -75934151 + MER54A LTR ERVL 1 321 -580 6 923 377 294 178 23 chr13 44350161 44350335 -75933977 + RMER30 DNA MER1_type 1 201 -1 6 923 1712 300 69 66 chr13 44350335 44350797 -75933515 + MER54A LTR ERVL 322 744 -157 6 923 795 276 50 72 chr13 44350796 44351159 -75933153 + MTEb LTR MaLR 25 379 0 6 923 550 298 74 87 chr13 44351543 44352017 -75932295 - L1MC5 LINE L1 -816 7145 6678 6 923 427 272 112 0 chr13 44352535 44352660 -75931652 + B1F SINE Alu 6 144 -5 6 923 201 138 0 0 chr13 44352660 44352689 -75931623 + (GGGAA)n Simple_repeat Simple_repeat 2 30 0 6 923 21 0 0 0 chr13 44352709 44352730 -75931582 + AT_rich Low_complexity Low_complexity 1 21 0 6 923 180 0 0 0 chr13 44352825 44352845 -75931467 + (A)n Simple_repeat Simple_repeat 1 20 0 6 923 1061 202 107 0 chr13 44352966 44353208 -75931104 - ORR1D2 LTR MaLR -102 268 1 6 923 629 274 145 83 chr13 44354155 44354493 -75929819 - ORR1E LTR MaLR 0 359 1 6 923 344 331 16 0 chr13 44354493 44354620 -75929692 - L1MB8 LINE L1 -35 6143 6015 6 923 204 118 29 0 chr13 44354739 44354773 -75929539 + (TCCA)n Simple_repeat Simple_repeat 3 37 0 6 923 317 323 14 57 chr13 44355532 44355673 -75928639 - MLT1A LTR MaLR -3 405 228 6 923 372 319 42 21 chr13 44355723 44355867 -75928445 - MLT1A LTR MaLR -227 147 1 6 923 202 307 61 30 chr13 44357602 44357733 -75926579 - MIR SINE MIR -34 228 94 6 923 307 324 75 84 chr13 44357805 44358680 -75925632 + L2a LINE L2 2470 3389 -37 6 923 494 298 58 63 chr13 44359362 44359727 -75924585 - BLACKJACK DNA AcHobo -6 2938 2576 6 923 3002 15 0 6 chr13 44359746 44360085 -75924227 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 923 56386 22 17 7 chr13 44360085 44366492 -75917820 + IAPEz-int LTR ERVK 8 6481 0 6 923 3002 15 0 6 chr13 44366492 44366831 -75917481 + IAPLTR1a_Mm LTR ERVK 1 337 0 6 923 290 253 24 0 chr13 44366835 44366918 -75917394 - BLACKJACK DNA AcHobo -394 2550 2466 6 923 225 377 26 0 chr13 44367041 44367155 -75917157 - BLACKJACK DNA AcHobo -517 2427 2311 6 923 522 0 0 0 chr13 44367164 44367222 -75917090 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 923 1763 232 44 32 chr13 44367309 44367835 -75916477 - RMER5 LTR ERV1 0 534 3 6 923 1595 286 130 97 chr13 44367835 44369341 -75914971 - BLACKJACK DNA AcHobo -661 2283 728 6 923 346 306 263 10 chr13 44369387 44369588 -75914724 + B4A SINE B4 41 292 0 6 923 234 296 0 0 chr13 44370719 44370790 -75913522 + MIR SINE MIR 86 156 -106 6 923 330 342 55 55 chr13 44371096 44371421 -75912891 + MLT1C LTR MaLR 139 463 -4 6 923 289 299 85 16 chr13 44371436 44371565 -75912747 + L1MB5 LINE L1 6031 6168 -6 6 923 324 0 0 0 chr13 44371635 44371671 -75912641 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 923 645 181 0 0 chr13 44371738 44371876 -75912436 + (CA)n Simple_repeat Simple_repeat 2 139 0 6 923 233 29 0 29 chr13 44372233 44372268 -75912044 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 6 923 297 0 0 0 chr13 44373265 44373298 -75911014 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 923 399 311 66 31 chr13 44373377 44373573 -75910739 - MIRb SINE MIR -37 231 29 6 923 246 272 0 0 chr13 44374271 44374352 -75909960 + (TG)n Simple_repeat Simple_repeat 2 82 0 6 923 240 289 69 17 chr13 44374823 44374939 -75909373 + L1M5 LINE L1 5672 5793 -331 6 923 207 342 51 26 chr13 44376946 44377063 -75907249 + MIRb SINE MIR 86 205 -63 6 923 966 255 70 48 chr13 44377252 44377623 -75906689 + MTEa LTR MaLR 1 379 0 6 923 271 254 0 0 chr13 44378161 44378220 -75906092 + AmnSINE1 SINE SINE 391 449 -126 6 923 363 200 110 0 chr13 44378716 44378816 -75905496 + B1F SINE Alu 33 143 -6 6 923 243 219 62 0 chr13 44378839 44378903 -75905409 + GA-rich Low_complexity Low_complexity 3 70 0 6 923 488 323 72 58 chr13 44379309 44379601 -75904711 + B4 SINE B4 14 272 -20 6 923 454 215 0 20 chr13 44379609 44379756 -75904556 + (CATATA)n Simple_repeat Simple_repeat 3 146 0 6 923 439 221 47 19 chr13 44379806 44379912 -75904400 + PB1D10 SINE Alu 9 117 0 6 923 26 30 0 0 chr13 44380742 44380775 -75903537 + AT_rich Low_complexity Low_complexity 1 33 0 6 923 1040 216 0 14 chr13 44382213 44382424 -75901888 + B3 SINE B2 3 210 -6 6 923 446 320 13 7 chr13 44382489 44382643 -75901669 - RSINE1 SINE B4 -9 156 2 6 923 429 266 9 9 chr13 44382735 44382849 -75901463 - PB1D10 SINE Alu -2 115 2 6 923 274 224 35 0 chr13 44383062 44383120 -75901192 + ORR1E LTR MaLR 51 110 -249 6 923 330 45 0 0 chr13 44383373 44383417 -75900895 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 923 510 17 0 0 chr13 44383604 44383663 -75900649 + (TTCC)n Simple_repeat Simple_repeat 2 60 0 6 923 252 143 0 0 chr13 44383663 44383705 -75900607 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 923 213 39 0 0 chr13 44384744 44384770 -75899542 + (CCCCCA)n Simple_repeat Simple_repeat 4 29 0 6 923 255 31 0 0 chr13 44385043 44385075 -75899237 + (TTG)n Simple_repeat Simple_repeat 3 34 0 6 923 306 325 53 0 chr13 44385075 44385189 -75899123 - B1_Mur1 SINE Alu -14 135 16 6 923 252 0 0 0 chr13 44385396 44385424 -75898888 + (A)n Simple_repeat Simple_repeat 1 28 0 6 923 636 215 29 22 chr13 44385463 44385601 -75898711 + B1_Mur1 SINE Alu 1 139 -10 6 923 189 107 0 0 chr13 44385601 44385629 -75898683 + (TAA)n Simple_repeat Simple_repeat 2 29 0 6 923 786 191 98 0 chr13 44385688 44385882 -75898430 - B3 SINE B2 -1 215 3 6 923 425 216 0 256 chr13 44386273 44386441 -75897871 + B1F1 SINE Alu 1 125 -2 6 923 246 194 81 0 chr13 44386458 44386520 -75897792 + ID4 SINE ID 4 70 -13 6 923 350 248 18 73 chr13 44386565 44386674 -75897638 - ORR1E LTR MaLR -249 110 8 6 923 280 298 21 0 chr13 44387660 44387754 -75896558 - LTR33A LTR ERVL -128 392 297 6 923 904 298 132 3 chr13 44388041 44388368 -75895944 - Tigger7 DNA MER2_type -2023 468 100 6 923 850 134 42 0 chr13 44388368 44388510 -75895802 + B1_Mur3 SINE Alu 1 148 -1 6 923 228 135 0 0 chr13 44388510 44388547 -75895765 + (GA)n Simple_repeat Simple_repeat 1 37 0 6 923 1085 67 13 0 chr13 44388565 44388715 -75895597 + (GGAGA)n Simple_repeat Simple_repeat 4 155 0 6 923 22 0 0 0 chr13 44388804 44388826 -75895486 + AT_rich Low_complexity Low_complexity 1 22 0 6 923 706 279 15 35 chr13 44389781 44389978 -75894334 + MTEa LTR MaLR 1 193 -186 6 923 766 196 85 29 chr13 44389979 44390265 -75894047 + RLTR20D LTR ERVK 1 347 -221 6 923 333 102 0 0 chr13 44390266 44390325 -75893987 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 923 534 202 11 0 chr13 44390325 44390414 -75893898 + RLTR20D LTR ERVK 479 568 0 6 923 330 285 74 132 chr13 44390429 44390619 -75893693 + MTEa LTR MaLR 181 359 0 6 923 486 223 13 18 chr13 44391790 44392014 -75892298 + GA-rich Low_complexity Low_complexity 1 223 0 6 923 974 54 8 0 chr13 44392014 44392143 -75892169 + (GAA)n Simple_repeat Simple_repeat 1 130 0 6 923 718 268 10 53 chr13 44392392 44392601 -75891711 - B3 SINE B2 -2 214 15 6 923 213 206 0 45 chr13 44392730 44392784 -75891528 + T-rich Low_complexity Low_complexity 14 64 0 6 923 222 37 0 0 chr13 44392784 44392811 -75891501 + (TGGG)n Simple_repeat Simple_repeat 4 30 0 6 923 213 206 0 45 chr13 44392811 44392822 -75891490 + T-rich Low_complexity Low_complexity 3 13 0 6 923 467 301 9 26 chr13 44392908 44393024 -75891288 - ID_B1 SINE B4 -8 216 103 6 923 609 270 42 20 chr13 44392992 44393171 -75891141 - B3A SINE B2 -30 186 1 6 923 1457 149 207 40 chr13 44394265 44394426 -75889886 - ORR1C2 LTR MaLR 0 384 205 6 923 1020 119 0 0 chr13 44394426 44394585 -75889727 + (GA)n Simple_repeat Simple_repeat 1 159 0 6 923 1457 149 207 40 chr13 44394585 44394752 -75889560 - ORR1C2 LTR MaLR -180 204 1 6 923 180 327 54 36 chr13 44394759 44394870 -75889442 - MIRc SINE MIR -113 155 43 6 923 1190 247 78 42 chr13 44395329 44395688 -75888624 + MTEa LTR MaLR 8 379 0 6 923 570 254 69 8 chr13 44396513 44396644 -75887668 - RSINE1 SINE B4 -26 139 1 6 923 724 268 10 10 chr13 44396856 44397044 -75887268 + B3A SINE B2 1 188 -28 6 923 440 271 16 47 chr13 44397872 44398000 -75886312 + B1F1 SINE Alu 26 149 0 6 923 191 357 36 79 chr13 44398328 44398344 -75885968 - L2a LINE L2 -1 3386 3374 6 923 396 0 0 0 chr13 44398344 44398388 -75885924 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 923 255 347 98 1 chr13 44398388 44398511 -75885801 - L2a LINE L2 -27 3399 3253 6 923 1991 82 46 64 chr13 44399250 44399577 -75884735 - ORR1A4 LTR MaLR -8 321 1 6 923 183 80 0 0 chr13 44399611 44399636 -75884676 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 923 570 300 171 51 chr13 44399724 44400152 -75884160 - LTR50 LTR ERVL -315 480 2 6 923 561 30 0 0 chr13 44400294 44400361 -75883951 + (GGA)n Simple_repeat Simple_repeat 3 69 0 6 923 810 213 233 28 chr13 44400624 44400874 -75883438 + ORR1E LTR MaLR 1 321 -58 6 923 222 238 32 0 chr13 44400974 44401037 -75883275 + GA-rich Low_complexity Low_complexity 2 66 0 6 923 396 270 289 31 chr13 44401189 44401351 -75882961 + RMER10A LTR ERVL 73 255 -187 6 923 786 41 0 0 chr13 44401351 44401449 -75882863 + (TCTCC)n Simple_repeat Simple_repeat 5 102 0 6 923 396 270 289 31 chr13 44401449 44401573 -75882739 + RMER10A LTR ERVL 256 433 -9 6 923 600 279 172 40 chr13 44402771 44403021 -75881291 + B4 SINE B4 2 284 -8 7 923 279 113 0 0 chr13 44403203 44403256 -75881056 + (T)n Simple_repeat Simple_repeat 1 53 0 7 923 233 295 71 40 chr13 44403300 44403399 -75880913 + MamGypLTR2b LTR Gypsy 27 128 -794 7 923 495 33 0 0 chr13 44403964 44404025 -75880287 + (TC)n Simple_repeat Simple_repeat 1 61 0 7 923 623 270 22 28 chr13 44404441 44404620 -75879692 + B3A SINE B2 5 182 -16 7 923 1218 84 6 6 chr13 44405903 44406071 -75878241 - RMER19C LTR ERVK 0 611 444 7 923 919 269 67 85 chr13 44406069 44406398 -75877914 + MTEb LTR MaLR 55 377 -2 7 923 1402 248 73 36 chr13 44407094 44407450 -75876862 + MTE2b LTR MaLR 11 379 0 7 923 21 0 0 0 chr13 44408474 44408495 -75875817 + AT_rich Low_complexity Low_complexity 1 21 0 7 923 432 0 0 0 chr13 44408671 44408719 -75875593 + (TAA)n Simple_repeat Simple_repeat 1 48 0 7 923 341 280 43 39 chr13 44408998 44409141 -75875171 + L1MB2 LINE L1 5551 5691 -489 7 923 450 253 96 0 chr13 44409594 44409740 -75874572 + L1MB2 LINE L1 5660 5819 -352 7 923 306 277 29 86 chr13 44409835 44409869 -75874443 + YREP_Mm Unknown Unknown 157 289 -1523 7 923 509 230 37 7 chr13 44409869 44410003 -75874309 - B1F SINE Alu -10 139 2 7 923 443 267 155 30 chr13 44410015 44410312 -75874000 + L1MB2 LINE L1 5827 6160 -11 7 923 397 307 0 0 chr13 44410665 44410766 -75873546 + B1F2 SINE Alu 42 142 -7 7 923 941 130 0 6 chr13 44410769 44410932 -75873380 + (GGGA)n Simple_repeat Simple_repeat 1 162 0 7 923 866 75 11 7 chr13 44411310 44411444 -75872868 - B1_Mm SINE Alu 0 147 17 7 923 1408 199 90 22 chr13 44411519 44411874 -75872438 - MTE2a LTR MaLR 0 379 1 7 923 582 15 0 0 chr13 44413535 44413602 -75870710 + (GTTTG)n Simple_repeat Simple_repeat 5 71 0 7 923 797 236 44 31 chr13 44413960 44414182 -75870130 + B4 SINE B4 29 249 -43 7 923 261 0 0 0 chr13 44414789 44414818 -75869494 + (A)n Simple_repeat Simple_repeat 1 29 0 7 923 238 315 37 115 chr13 44415117 44415386 -75868926 + ORR1E LTR MaLR 110 357 -2 7 923 647 331 58 21 chr13 44415448 44415777 -75868535 - MLT1B LTR MaLR -11 379 7 7 923 1558 109 54 40 chr13 44416040 44416318 -75867994 - Lx LINE L1 -10 6644 6363 7 923 495 281 63 80 chr13 44416992 44417250 -75867062 + MLT1C LTR MaLR 2 249 -141 7 923 708 249 5 87 chr13 44417271 44417478 -75866834 - MTEa LTR MaLR -34 345 156 7 923 366 171 0 0 chr13 44417478 44417548 -75866764 + (CA)n Simple_repeat Simple_repeat 1 70 0 7 923 489 226 0 75 chr13 44417563 44417697 -75866615 - MTEa LTR MaLR -255 124 1 7 923 1200 158 16 0 chr13 44418199 44418389 -75865923 + B3 SINE B2 5 197 -19 7 923 1221 151 5 0 chr13 44418535 44418727 -75865585 + B2_Mm1a SINE B2 1 193 0 7 923 439 216 0 58 chr13 44418807 44418910 -75865402 - B1F SINE Alu -2 147 51 7 923 994 293 150 30 chr13 44418949 44419448 -75864864 + MER89 LTR ERV1 1 559 0 7 923 198 91 0 0 chr13 44419550 44419583 -75864729 + (A)n Simple_repeat Simple_repeat 1 33 0 7 923 1253 258 88 25 chr13 44420043 44420397 -75863915 + MTEb LTR MaLR 1 376 -3 7 923 564 291 149 42 chr13 44420430 44420785 -75863527 - LTR79 LTR ERVL 0 527 135 7 923 312 119 0 0 chr13 44420985 44421044 -75863268 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 923 426 39 0 0 chr13 44421473 44421525 -75862787 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 7 923 628 256 0 0 chr13 44421823 44421940 -75862372 + RSINE1 SINE B4 46 162 -3 7 923 446 171 24 0 chr13 44422322 44422404 -75861908 + B3A SINE B2 1 84 -114 7 923 245 135 19 0 chr13 44422413 44422465 -75861847 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 923 947 97 7 0 chr13 44422584 44422729 -75861583 + (TTGG)n Simple_repeat Simple_repeat 2 147 0 7 923 372 43 0 0 chr13 44423127 44423173 -75861139 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 923 477 0 0 0 chr13 44423173 44423225 -75861087 + (GA)n Simple_repeat Simple_repeat 1 53 0 7 923 27 29 0 0 chr13 44424423 44424457 -75859855 + AT_rich Low_complexity Low_complexity 1 34 0 7 923 707 264 0 0 chr13 44424472 44424616 -75859696 - RSINE1 SINE B4 -18 147 4 7 923 211 336 30 0 chr13 44425506 44425583 -75858729 + MIR SINE MIR 16 95 -181 7 923 266 323 138 49 chr13 44425765 44426113 -75858199 - L2c LINE L2 -6 3381 3003 7 923 443 330 134 27 chr13 44426263 44426664 -75857648 - LTR33 LTR ERVL 0 515 50 7 923 1291 91 11 0 chr13 44426715 44426891 -75857421 + B2_Mm1t SINE B2 2 179 -14 7 923 257 206 0 9 chr13 44427133 44427241 -75857071 + (TG)n Simple_repeat Simple_repeat 1 107 0 7 923 315 0 0 0 chr13 44427308 44427343 -75856969 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 923 605 300 99 12 chr13 44427726 44427979 -75856333 + MLT1C LTR MaLR 193 467 0 7 923 562 324 7 39 chr13 44428777 44428931 -75855381 + RSINE1 SINE B4 4 152 -13 7 923 279 309 30 36 chr13 44429045 44429187 -75855125 + MLT1A1 LTR MaLR 225 405 -3 7 923 253 198 0 20 chr13 44429735 44429833 -75854479 + CT-rich Low_complexity Low_complexity 1 96 0 7 923 621 254 61 107 chr13 44430378 44430753 -75853559 - RLTR15 LTR ERVK 0 359 2 7 923 4261 135 226 21 chr13 44431178 44432028 -75852284 + RLTR25B LTR ERVK 5 1028 0 7 923 832 248 88 55 chr13 44432494 44432767 -75851545 + B4A SINE B4 3 284 -8 7 923 220 167 0 62 chr13 44432780 44432844 -75851468 + (CAGAGA)n Simple_repeat Simple_repeat 6 65 0 7 924 481 292 78 31 chr13 44433795 44434050 -75850262 + L1MD2 LINE L1 5727 5993 -366 7 924 435 317 94 94 chr13 44434081 44434422 -75849890 - ORR1E LTR MaLR 0 359 19 7 924 349 289 13 57 chr13 44434531 44434689 -75849623 + L1MD2 LINE L1 6195 6345 -14 7 924 252 143 0 0 chr13 44435014 44435056 -75849256 + (AGGGGG)n Simple_repeat Simple_repeat 2 43 0 7 924 207 0 0 0 chr13 44435430 44435453 -75848859 + (A)n Simple_repeat Simple_repeat 1 23 0 7 924 619 282 68 89 chr13 44436287 44436567 -75847745 + B4A SINE B4 1 274 -18 7 924 204 270 16 0 chr13 44436658 44436721 -75847591 + (CAGAGA)n Simple_repeat Simple_repeat 1 64 0 7 924 886 151 13 33 chr13 44436930 44437081 -75847231 + B1_Mur1 SINE Alu 2 149 0 7 924 243 0 0 0 chr13 44437415 44437442 -75846870 + (A)n Simple_repeat Simple_repeat 1 27 0 7 924 219 264 27 40 chr13 44437635 44437710 -75846602 + MIRm SINE MIR 2 78 -198 7 924 401 285 39 148 chr13 44437843 44438148 -75846164 + ORR1E LTR MaLR 77 348 -11 7 924 247 255 0 0 chr13 44439149 44439200 -75845112 + MER53 DNA hAT 15 65 -128 7 924 195 42 0 0 chr13 44439214 44439238 -75845074 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 924 695 247 6 38 chr13 44439239 44439399 -75844913 - B3A SINE B2 -37 161 7 7 924 1043 273 73 38 chr13 44439404 44439747 -75844565 - ORR1E LTR MaLR 0 359 5 7 924 284 250 70 40 chr13 44439752 44439852 -75844460 + MER53 DNA hAT 91 193 0 7 924 295 309 140 49 chr13 44441318 44441345 -75842967 + ID_B1 SINE B4 60 154 -70 7 924 332 240 218 10 chr13 44441345 44441446 -75842866 + B1_Mur1 SINE Alu 2 123 -26 7 924 295 309 140 49 chr13 44441446 44441461 -75842851 + ID_B1 SINE B4 155 215 -9 7 924 268 245 208 30 chr13 44441652 44441753 -75842559 - L2b LINE L2 -8 3367 3249 7 924 953 144 0 0 chr13 44441915 44442054 -75842258 + B1_Mur4 SINE Alu 1 139 -11 7 924 1871 287 26 24 chr13 44442077 44442777 -75841535 - L1MA8 LINE L1 -35 6256 5556 7 924 225 330 11 21 chr13 44443201 44443294 -75841018 - MIR SINE MIR -75 133 42 7 924 514 324 166 6 chr13 44443532 44443846 -75840466 + ORR1D2 LTR MaLR 1 364 -6 7 924 439 281 29 66 chr13 44445014 44445146 -75839166 - MLT1C LTR MaLR 0 467 341 7 924 647 310 41 88 chr13 44445146 44445510 -75838802 + ORR1E LTR MaLR 1 347 -12 7 924 361 299 119 83 chr13 44445489 44445766 -75838546 - MLT1C LTR MaLR -66 324 38 7 924 226 333 13 0 chr13 44445849 44445927 -75838385 - ID4_ SINE ID -2 81 3 7 924 3015 41 7 79 chr13 44445944 44446364 -75837948 + RLTR10 LTR ERVK 1 390 0 7 924 17319 26 3 0 chr13 44446374 44448313 -75835999 + RLTR10-int LTR ERVK 41 1984 -3 7 924 2965 39 7 116 chr13 44448315 44448753 -75835559 + RLTR10 LTR ERVK 1 390 0 7 924 312 315 99 8 chr13 44448858 44448989 -75835323 + RSINE1 SINE B4 15 157 -8 7 924 214 179 0 0 chr13 44448998 44449037 -75835275 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 924 215 194 0 0 chr13 44449046 44449082 -75835230 + polypurine Low_complexity Low_complexity 2 37 0 7 924 349 226 124 39 chr13 44450058 44450187 -75834125 + L1MA4 LINE L1 5788 5927 -373 7 924 261 0 0 0 chr13 44450351 44450380 -75833932 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 924 900 139 0 0 chr13 44450498 44450670 -75833642 + (CA)n Simple_repeat Simple_repeat 1 172 0 7 924 882 257 27 130 chr13 44450680 44451118 -75833194 - Lx9 LINE L1 -1141 6503 6111 7 924 916 315 29 92 chr13 44451274 44451620 -75832692 + MER58B DNA MER1_type 18 341 0 7 924 692 80 0 10 chr13 44452150 44452251 -75832061 + (GGA)n Simple_repeat Simple_repeat 1 100 0 7 924 621 289 7 0 chr13 44452537 44452686 -75831626 - RSINE1 SINE B4 -13 152 3 7 924 246 22 64 21 chr13 44452909 44452956 -75831356 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 7 924 689 202 8 8 chr13 44452960 44453090 -75831222 + B1_Mus1 SINE Alu 2 131 -17 7 924 597 64 0 0 chr13 44453095 44453173 -75831139 + (GAAA)n Simple_repeat Simple_repeat 1 78 0 7 924 259 301 82 0 chr13 44453606 44453679 -75830633 + ID4 SINE ID 2 80 -3 7 924 313 302 10 59 chr13 44453860 44453962 -75830350 + PB1D10 SINE Alu 18 114 -3 7 924 294 300 0 0 chr13 44453979 44454049 -75830263 + ID4 SINE ID 3 72 -11 7 924 756 0 0 0 chr13 44454060 44454144 -75830168 + (GGA)n Simple_repeat Simple_repeat 1 84 0 7 924 204 40 0 0 chr13 44454682 44454707 -75829605 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 924 250 310 23 11 chr13 44455028 44455116 -75829196 - MIR3 SINE MIR -9 199 111 8 924 318 50 0 0 chr13 44456200 44456240 -75828072 + (A)n Simple_repeat Simple_repeat 1 40 0 8 924 318 26 0 0 chr13 44456850 44456889 -75827423 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 924 472 182 18 0 chr13 44456902 44457072 -75827240 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 8 924 330 91 0 0 chr13 44457073 44457128 -75827184 + (TG)n Simple_repeat Simple_repeat 2 56 0 8 924 969 273 127 8 chr13 44457130 44457374 -75826938 - B4A SINE B4 -11 281 9 8 924 189 0 0 0 chr13 44457564 44457585 -75826727 + (CA)n Simple_repeat Simple_repeat 2 22 0 8 924 246 128 0 0 chr13 44458442 44458481 -75825831 + (A)n Simple_repeat Simple_repeat 1 39 0 8 924 1316 233 128 23 chr13 44458832 44459223 -75825089 + RMER5 LTR ERV1 103 534 0 8 924 516 279 32 7 chr13 44459223 44459368 -75824944 + MLT1A1 LTR MaLR 243 391 -17 8 924 277 338 15 59 chr13 44459392 44459569 -75824743 + MLT1B LTR MaLR 184 343 -47 8 924 1251 94 0 0 chr13 44459709 44459889 -75824423 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 8 924 768 136 0 0 chr13 44459890 44460015 -75824297 + (TCCC)n Simple_repeat Simple_repeat 4 128 0 8 924 1814 157 21 21 chr13 44460886 44461219 -75823093 - RLTR20B1 LTR ERVK 0 563 231 8 924 22 56 0 0 chr13 44461226 44461262 -75823050 + AT_rich Low_complexity Low_complexity 1 36 0 8 924 1042 234 5 9 chr13 44461554 44461770 -75822542 + ID_B1 SINE B4 1 215 -9 8 924 21 36 0 0 chr13 44462340 44462368 -75821944 + AT_rich Low_complexity Low_complexity 1 28 0 8 924 1971 161 53 17 chr13 44462433 44462792 -75821520 - ORR1D1 LTR MaLR -2 372 1 8 924 262 272 16 12 chr13 44464420 44464513 -75819799 - BC1_Mm scRNA scRNA -56 96 2 8 924 381 266 13 0 chr13 44464631 44464710 -75819602 + ID4_ SINE ID 3 82 -1 8 924 262 115 0 37 chr13 44465550 44465604 -75818708 + C-rich Low_complexity Low_complexity 2 53 0 8 924 270 0 0 0 chr13 44465740 44465770 -75818542 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 924 207 0 0 0 chr13 44467281 44467304 -75817008 + (T)n Simple_repeat Simple_repeat 1 23 0 8 924 1154 56 21 0 chr13 44467304 44467448 -75816864 - B1_Mm SINE Alu 0 147 1 8 924 22 35 0 0 chr13 44467451 44467480 -75816832 + AT_rich Low_complexity Low_complexity 1 29 0 8 924 524 154 10 0 chr13 44467480 44467584 -75816728 + (CA)n Simple_repeat Simple_repeat 2 106 0 8 924 763 254 53 14 chr13 44467671 44467879 -75816433 - B3 SINE B2 0 216 1 8 924 487 328 117 5 chr13 44468262 44468458 -75815854 + ID_B1 SINE B4 1 218 -6 8 924 335 199 6 61 chr13 44468472 44468547 -75815765 + ID4 SINE ID 4 78 -74 8 924 507 17 0 0 chr13 44468547 44468607 -75815705 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 924 248 262 33 123 chr13 44468607 44468653 -75815659 + BC1_Mm scRNA scRNA 79 114 -38 8 924 678 85 0 0 chr13 44468830 44468924 -75815388 + (CA)n Simple_repeat Simple_repeat 2 95 0 8 924 420 239 9 44 chr13 44469151 44469265 -75815047 - PB1D10 SINE Alu -2 115 6 8 924 237 263 66 0 chr13 44470391 44470467 -75813845 - B2_Mm2 SINE B2 -49 146 66 8 924 182 219 24 0 chr13 44470556 44470597 -75813715 - MER5A DNA MER1_type -14 175 134 8 924 781 235 6 18 chr13 44471867 44472036 -75812276 - B3A SINE B2 -31 167 1 8 924 255 61 0 0 chr13 44472257 44472290 -75812022 + (CCCCCA)n Simple_repeat Simple_repeat 3 35 0 8 924 572 271 18 10 chr13 44472533 44472698 -75811614 + ID_B1 SINE B4 2 164 -128 8 924 3105 157 15 67 chr13 44472698 44473313 -75810999 + RMER4B LTR ERVK 3 585 0 8 924 501 278 38 72 chr13 44473313 44473356 -75810956 + B4 SINE B4 165 202 -90 8 924 450 108 65 0 chr13 44473367 44473460 -75810852 + GA-rich Low_complexity Low_complexity 6 104 0 8 924 405 0 0 0 chr13 44473466 44473511 -75810801 + (TA)n Simple_repeat Simple_repeat 2 46 0 8 924 1900 141 8 22 chr13 44475157 44475510 -75808802 - ORR1A4 LTR MaLR 0 367 16 8 924 409 332 93 25 chr13 44475521 44475724 -75808588 - MTEb LTR MaLR -64 315 99 8 924 1062 203 185 10 chr13 44475724 44476032 -75808280 - MTD LTR MaLR 0 419 58 8 924 213 299 103 13 chr13 44476200 44476278 -75808034 - ID_B1 SINE B4 -58 166 82 8 924 498 33 0 0 chr13 44476515 44476575 -75807737 + (TG)n Simple_repeat Simple_repeat 2 61 0 8 924 1096 258 148 6 chr13 44476652 44476976 -75807336 - ORR1D2 LTR MaLR 0 370 1 8 924 299 314 40 32 chr13 44477471 44477596 -75806716 - MIR3 SINE MIR -5 203 78 8 924 306 268 61 0 chr13 44478031 44478113 -75806199 - PB1D7 SINE Alu -32 88 2 8 924 389 305 60 15 chr13 44478301 44478434 -75805878 + B1F1 SINE Alu 6 144 -5 8 924 491 26 0 49 chr13 44478441 44478522 -75805790 + (CA)n Simple_repeat Simple_repeat 2 78 0 8 924 399 21 0 0 chr13 44478576 44478624 -75805688 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 924 597 274 25 44 chr13 44479471 44479631 -75804681 + RSINE1 SINE B4 9 165 0 8 924 297 128 0 0 chr13 44480007 44480054 -75804258 + (GGAA)n Simple_repeat Simple_repeat 4 50 0 8 924 2405 143 57 12 chr13 44480242 44480742 -75803570 + RLTR31A_Mm LTR ERVK 1 560 -1 8 924 304 275 162 0 chr13 44480744 44480824 -75803488 + ID_B1 SINE B4 80 172 -52 8 924 415 205 210 0 chr13 44480754 44480858 -75803454 + PB1D10 SINE Alu 9 132 -15 8 924 1411 64 27 5 chr13 44481240 44481399 -75802913 + B2_Mm1a SINE B2 2 160 -33 8 924 207 0 0 0 chr13 44481399 44481422 -75802890 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 8 924 1411 64 27 5 chr13 44481422 44481450 -75802862 + B2_Mm1a SINE B2 161 193 0 8 924 1290 61 30 0 chr13 44481464 44481628 -75802684 + B2_Mm2 SINE B2 3 171 -24 8 924 701 23 0 11 chr13 44481628 44481716 -75802596 + (GAAA)n Simple_repeat Simple_repeat 2 88 0 8 924 746 248 59 20 chr13 44482730 44482932 -75801380 - ID_B1 SINE B4 -13 211 2 8 924 3818 25 9 0 chr13 44483598 44484030 -75800282 - RLTR10C LTR ERVK 0 436 1 8 924 374 335 87 79 chr13 44484181 44484354 -75799958 + ORR1E LTR MaLR 1 169 -190 8 924 1219 101 0 92 chr13 44484354 44484561 -75799751 + B2_Mm2 SINE B2 1 188 -7 8 924 374 335 87 79 chr13 44484561 44484743 -75799569 + ORR1E LTR MaLR 170 359 0 8 924 455 297 210 45 chr13 44484776 44485090 -75799222 - MLT1A1 LTR MaLR 0 408 43 8 924 287 302 0 75 chr13 44485378 44485402 -75798910 + ID SINE ID 64 80 -144 8 924 343 221 42 42 chr13 44485402 44485473 -75798839 + B1F SINE Alu 3 73 -76 8 924 209 194 0 0 chr13 44485501 44485537 -75798775 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 924 658 279 55 10 chr13 44485729 44485928 -75798384 + ID_B1 SINE B4 2 209 -15 8 924 655 62 10 10 chr13 44485930 44486028 -75798284 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 8 924 516 285 29 14 chr13 44486748 44486887 -75797425 + B3A SINE B2 57 197 -1 8 924 635 292 19 13 chr13 44486923 44487079 -75797233 + RSINE1 SINE B4 9 165 0 8 924 219 103 0 0 chr13 44487080 44487119 -75797193 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 924 556 265 122 24 chr13 44487266 44487471 -75796841 - RMER15 LTR ERVL -14 561 337 8 924 539 257 43 35 chr13 44488178 44488319 -75795993 + RSINE1 SINE B4 1 142 -23 8 924 26 0 0 0 chr13 44488336 44488362 -75795950 + AT_rich Low_complexity Low_complexity 1 26 0 8 924 697 244 26 33 chr13 44488512 44488666 -75795646 + B3A SINE B2 1 161 -34 8 924 234 128 0 0 chr13 44488666 44488705 -75795607 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 924 384 277 64 80 chr13 44488705 44488738 -75795574 + B2_Mm2 SINE B2 162 185 -10 8 924 242 217 14 0 chr13 44489191 44489260 -75795052 + GA-rich Low_complexity Low_complexity 2 71 0 8 924 1554 220 96 29 chr13 44490093 44490468 -75793844 + MTD LTR MaLR 7 406 -13 8 924 1666 145 104 7 chr13 44490644 44490942 -75793370 - IAPEY3_LTR LTR ERVK -5 327 1 8 924 228 284 17 121 chr13 44491539 44491655 -75792657 + MLT1J LTR MaLR 156 259 -253 8 924 1312 93 27 0 chr13 44492249 44492432 -75791880 + B2_Mm1t SINE B2 2 189 -4 8 924 681 217 16 0 chr13 44493012 44493141 -75791171 - ID_B1 SINE B4 -2 222 92 8 924 571 251 161 10 chr13 44493326 44493519 -75790793 + ID_B1 SINE B4 3 224 0 8 924 189 74 0 0 chr13 44494802 44494829 -75789483 + (G)n Simple_repeat Simple_repeat 1 27 0 8 924 1317 335 89 17 chr13 44498254 44498614 -75785698 + MER82 DNA MER2_type 3 371 -282 8 924 224 100 25 0 chr13 44498614 44498654 -75785658 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 924 351 0 0 0 chr13 44498654 44498692 -75785620 + (GA)n Simple_repeat Simple_repeat 2 40 0 8 924 1317 335 89 17 chr13 44498692 44498923 -75785389 + MER82 DNA MER2_type 372 637 -16 8 924 219 340 97 44 chr13 44498993 44499035 -75785277 + PB1D7 SINE Alu 1 120 0 8 924 383 222 14 0 chr13 44499035 44499107 -75785205 + ID_B1 SINE B4 152 224 0 8 924 197 139 23 0 chr13 44499107 44499150 -75785162 + GA-rich Low_complexity Low_complexity 2 45 0 8 924 194 159 0 43 chr13 44499141 44499187 -75785125 + A-rich Low_complexity Low_complexity 5 48 0 8 924 369 0 0 0 chr13 44499277 44499318 -75784994 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 924 514 227 16 32 chr13 44499331 44499454 -75784858 - RSINE1 SINE B4 -42 123 3 8 924 327 316 65 0 chr13 44500143 44500298 -75784014 + MER119 DNA MER1_type 143 307 -276 1 924 564 226 0 0 chr13 44500590 44500808 -75783504 + (TG)n Simple_repeat Simple_repeat 1 218 0 2 924 329 111 0 18 chr13 44500808 44500863 -75783449 - HAL1-3A_ME LINE L1 -840 2018 1965 3 924 461 226 16 28 chr13 44501182 44501364 -75782948 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 924 935 222 146 121 chr13 44502149 44502539 -75781773 + MTD LTR MaLR 5 404 -15 5 924 570 285 189 12 chr13 44502605 44502943 -75781369 - Charlie4a DNA MER1_type -24 484 87 6 924 294 95 0 0 chr13 44504398 44504440 -75779872 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 924 1916 257 22 8 chr13 44505418 44505920 -75778392 + Lx7 LINE L1 6818 7326 -370 8 924 188 163 23 0 chr13 44505998 44506041 -75778271 + GA-rich Low_complexity Low_complexity 1 44 0 9 924 298 279 104 42 chr13 44506817 44507053 -75777259 + RMER15 LTR ERVL 276 552 -23 1 924 213 39 0 0 chr13 44507553 44507579 -75776733 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 924 558 189 0 0 chr13 44508173 44508284 -75776028 + (TG)n Simple_repeat Simple_repeat 1 111 0 1 924 234 91 0 0 chr13 44509120 44509153 -75775159 + (T)n Simple_repeat Simple_repeat 1 33 0 1 924 342 0 0 0 chr13 44509315 44509353 -75774959 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 924 205 205 0 0 chr13 44509457 44509496 -75774816 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 924 550 225 33 0 chr13 44509500 44509620 -75774692 - B1F SINE Alu -5 144 21 1 924 524 301 17 157 chr13 44509620 44509736 -75774576 - ID_B1 SINE B4 -5 219 17 1 924 549 198 23 16 chr13 44509763 44509891 -75774421 - B1F SINE Alu 0 149 21 1 924 322 319 87 45 chr13 44510092 44510381 -75773931 + MLT1J LTR MaLR 212 512 0 1 924 199 255 64 0 chr13 44510550 44510597 -75773715 - L2 LINE L2 -380 3039 2990 2 924 22 0 0 0 chr13 44510668 44510690 -75773622 + AT_rich Low_complexity Low_complexity 1 22 0 2 924 313 305 44 71 chr13 44510695 44510808 -75773504 - PB1D10 SINE Alu -5 112 3 2 924 1165 55 7 0 chr13 44510852 44510998 -75773314 - B1_Mus2 SINE Alu 0 147 1 2 924 378 0 0 0 chr13 44511989 44512031 -75772281 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 924 212 319 0 62 chr13 44512198 44512295 -75772017 + CT-rich Low_complexity Low_complexity 4 94 0 2 924 240 232 18 0 chr13 44512744 44512800 -75771512 + CT-rich Low_complexity Low_complexity 4 60 0 2 924 211 104 20 20 chr13 44512808 44512857 -75771455 + (TC)n Simple_repeat Simple_repeat 1 49 0 2 924 294 82 40 40 chr13 44513561 44513637 -75770675 + T-rich Low_complexity Low_complexity 1 76 0 2 924 247 306 14 0 chr13 44514012 44514084 -75770228 + PB1D10 SINE Alu 16 88 -29 2 924 357 176 0 26 chr13 44514119 44514195 -75770117 - MTEb LTR MaLR -73 306 233 3 924 359 232 0 59 chr13 44516143 44516244 -75768068 + RSINE1 SINE B4 28 122 -43 3 924 423 0 0 0 chr13 44516245 44516292 -75768020 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 924 234 272 56 46 chr13 44516581 44516593 -75767719 + B1F2 SINE Alu 40 148 -1 3 924 440 208 0 0 chr13 44516593 44516689 -75767623 + ID_B1 SINE B4 128 223 -1 3 924 23 33 0 0 chr13 44516689 44516719 -75767593 + AT_rich Low_complexity Low_complexity 1 30 0 3 924 627 14 0 0 chr13 44517181 44517253 -75767059 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 924 438 75 0 0 chr13 44519469 44519536 -75764776 + (TTGG)n Simple_repeat Simple_repeat 1 67 0 3 924 926 48 0 8 chr13 44519536 44519656 -75764656 - B1_Mus1 SINE Alu -7 141 22 3 924 269 311 22 0 chr13 44519666 44519756 -75764556 - MLT2D LTR ERVL -60 500 409 3 924 907 317 45 18 chr13 44519951 44520288 -75764024 + ORR1E LTR MaLR 8 353 -6 4 924 223 328 37 30 chr13 44520727 44520862 -75763450 - MIRb SINE MIR -111 157 22 4 924 313 111 15 31 chr13 44522021 44522086 -75762226 + GA-rich Low_complexity Low_complexity 3 66 0 4 924 288 0 0 0 chr13 44522602 44522634 -75761678 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 4 924 1469 174 82 61 chr13 44522635 44522978 -75761334 - MTD LTR MaLR -23 396 47 4 924 331 152 17 0 chr13 44523019 44523078 -75761234 - MTD LTR MaLR -361 60 1 4 924 246 127 26 66 chr13 44523168 44523244 -75761068 - L1ME2z LINE L1 -136 6308 6236 4 924 576 261 124 78 chr13 44523252 44523599 -75760713 - ORR1E LTR MaLR 0 379 1 4 924 785 224 0 0 chr13 44523986 44524129 -75760183 + B1_Mur2 SINE Alu 1 143 -6 4 924 1671 213 5 40 chr13 44524819 44525196 -75759116 + ORR1B2 LTR MaLR 1 364 -3 4 924 1531 226 31 26 chr13 44525225 44525607 -75758705 + ORR1C2 LTR MaLR 1 384 0 4 924 396 82 0 0 chr13 44526566 44526627 -75757685 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 924 189 0 0 0 chr13 44527142 44527163 -75757149 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 5 924 802 157 28 20 chr13 44527622 44527798 -75756514 + B3 SINE B2 1 190 -5 5 924 430 260 128 16 chr13 44527863 44527988 -75756324 - RSINE1 SINE B4 -8 157 19 5 924 273 322 82 8 chr13 44528826 44528948 -75755364 - MER5A1 DNA MER1_type -4 162 32 5 924 226 335 101 41 chr13 44529701 44529919 -75754393 - L1M5 LINE L1 -403 5791 5561 5 924 737 228 0 0 chr13 44530254 44530399 -75753913 + ID_B1 SINE B4 80 224 0 5 924 713 269 0 6 chr13 44530682 44530843 -75753469 - RSINE1 SINE B4 -4 161 2 5 924 1005 251 122 35 chr13 44531484 44531852 -75752460 - MTD LTR MaLR -14 405 6 5 924 786 229 74 161 chr13 44532065 44532617 -75751695 - Charlie1 DNA MER1_type -1 2780 2277 5 924 634 266 40 0 chr13 44532615 44532788 -75751524 - B3 SINE B2 -5 211 32 6 924 1780 236 18 41 chr13 44532798 44533310 -75751002 - Charlie1 DNA MER1_type -483 2298 1799 5 924 408 308 115 26 chr13 44533488 44533758 -75750554 + MLT1C LTR MaLR 172 465 -2 6 924 305 224 13 13 chr13 44533765 44533842 -75750470 - Charlie1 DNA MER1_type -957 1824 1748 5 924 445 320 7 26 chr13 44533992 44534143 -75750169 - B4 SINE B4 -19 273 126 6 924 453 297 118 68 chr13 44536928 44537353 -75746959 + LTR48B LTR ERV1 38 650 -137 6 924 220 203 136 0 chr13 44538175 44538234 -75746078 + ID4 SINE ID 5 71 -12 6 924 339 25 0 0 chr13 44538234 44538274 -75746038 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 924 207 0 0 0 chr13 44538740 44538763 -75745549 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 924 499 286 61 50 chr13 44538824 44539177 -75745135 - ORR1E LTR MaLR 0 379 2 6 924 573 55 0 0 chr13 44539328 44539401 -75744911 + (CA)n Simple_repeat Simple_repeat 1 73 0 6 924 898 176 204 0 chr13 44539455 44539631 -75744681 + B3 SINE B2 5 216 0 6 924 571 286 17 29 chr13 44539975 44540148 -75744164 + B4A SINE B4 3 173 -119 7 924 906 134 0 34 chr13 44540250 44540489 -75743823 + GA-rich Low_complexity Low_complexity 1 230 0 7 924 3485 40 0 0 chr13 44540663 44541063 -75743249 + MTB LTR MaLR 1 400 0 7 924 255 236 0 15 chr13 44542352 44542491 -75741821 + (TG)n Simple_repeat Simple_repeat 1 136 0 7 924 766 274 60 81 chr13 44542517 44542815 -75741497 - B4A SINE B4 0 292 1 7 924 724 270 0 25 chr13 44543344 44543545 -75740767 + MTE2b LTR MaLR 50 245 -134 7 924 946 218 14 19 chr13 44543798 44544013 -75740299 + MTEa LTR MaLR 166 379 0 7 924 874 298 109 3 chr13 44544329 44544669 -75739643 - MLT1B LTR MaLR -14 376 1 7 924 291 290 88 20 chr13 44545327 44545429 -75738883 - MLT1A1 LTR MaLR -45 363 255 7 924 231 217 13 115 chr13 44545547 44545625 -75738687 - MLT1A1 LTR MaLR -264 101 32 7 924 211 296 89 22 chr13 44546370 44546505 -75737807 + MIR SINE MIR 119 262 0 7 924 253 261 0 0 chr13 44546544 44546609 -75737703 - MIR SINE MIR -2 260 196 8 924 293 316 7 99 chr13 44547467 44547485 -75736827 - ID_B1 SINE B4 0 224 211 8 924 225 65 0 0 chr13 44547485 44547516 -75736796 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 8 924 417 286 24 40 chr13 44547524 44547648 -75736664 - B1F1 SINE Alu -21 128 7 8 924 1508 57 0 63 chr13 44547782 44547989 -75736323 - B2_Mm2 SINE B2 0 195 2 8 924 467 314 65 32 chr13 44548092 44548339 -75735973 - L1MC LINE L1 -2179 5703 5449 8 924 1686 154 136 11 chr13 44549517 44549885 -75734427 - MTC LTR MaLR 0 421 8 8 924 219 69 0 0 chr13 44549966 44549995 -75734317 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 924 426 165 0 0 chr13 44550058 44550137 -75734175 + GA-rich Low_complexity Low_complexity 1 79 0 8 924 189 0 0 0 chr13 44550224 44550245 -75734067 + (TAA)n Simple_repeat Simple_repeat 1 21 0 8 924 361 224 228 14 chr13 44550464 44550609 -75733703 + MTEa LTR MaLR 204 379 0 9 924 1037 249 151 6 chr13 44551660 44551991 -75732321 - MTEa LTR MaLR 0 379 1 9 924 754 218 8 0 chr13 44552651 44552784 -75731528 - B1_Mur2 SINE Alu -13 136 3 9 924 975 231 14 23 chr13 44553141 44553358 -75730954 - B3 SINE B2 0 216 2 9 924 441 284 0 0 chr13 44553368 44553477 -75730835 - ID_B1 SINE B4 -6 218 110 9 924 237 260 6 0 chr13 44553524 44553585 -75730727 + PB1D10 SINE Alu 20 83 -66 9 924 216 0 0 0 chr13 44554908 44554932 -75729380 + (A)n Simple_repeat Simple_repeat 1 24 0 9 924 2029 155 29 3 chr13 44555326 44555676 -75728636 - RLTR15 LTR ERVK 0 359 1 9 924 4628 237 48 35 chr13 44555769 44556064 -75728248 + MYSERV16_I-int LTR ERVK 951 1263 -1063 9 924 215 61 30 0 chr13 44556064 44556097 -75728215 + (TATAA)n Simple_repeat Simple_repeat 1 34 0 9 924 4628 237 48 35 chr13 44556097 44556175 -75728137 + MYSERV16_I-int LTR ERVK 1264 1357 -969 9 924 1167 74 0 0 chr13 44556175 44556323 -75727989 + B1_Mus1 SINE Alu 1 148 0 1 924 4628 237 48 35 chr13 44556323 44557301 -75727011 + MYSERV16_I-int LTR ERVK 1358 2321 -5 9 924 2802 124 0 98 chr13 44557314 44557815 -75726497 + RLTR11B LTR ERVK 2 453 0 9 924 1191 75 0 0 chr13 44558702 44558848 -75725464 - B1_Mm SINE Alu -1 146 1 1 924 456 125 70 0 chr13 44558924 44559052 -75725260 + GA-rich Low_complexity Low_complexity 2 138 0 1 924 778 271 47 34 chr13 44559453 44559686 -75724626 + B4 SINE B4 2 237 -55 1 924 423 98 0 0 chr13 44559728 44559789 -75724523 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 924 256 186 152 0 chr13 44559807 44559866 -75724446 + MER34A1 LTR ERV1 63 130 -441 1 924 353 315 53 53 chr13 44559955 44560163 -75724149 + MER34A1 LTR ERV1 274 481 -106 1 924 844 298 54 22 chr13 44560164 44560442 -75723870 + B4A SINE B4 1 287 -5 1 924 342 67 0 0 chr13 44560449 44560494 -75723818 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 924 286 81 52 39 chr13 44560886 44560963 -75723349 + A-rich Low_complexity Low_complexity 2 79 0 1 924 509 0 16 0 chr13 44561465 44561526 -75722786 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 924 506 214 11 0 chr13 44562184 44562273 -75722039 + B1F1 SINE Alu 5 94 -55 1 924 204 182 0 43 chr13 44562313 44562359 -75721953 + GA-rich Low_complexity Low_complexity 1 44 0 1 924 758 280 91 11 chr13 44563337 44563601 -75720711 + B4A SINE B4 2 286 -6 1 924 315 291 0 64 chr13 44563757 44563867 -75720445 - MER34A1 LTR ERV1 -148 439 337 1 925 600 246 9 0 chr13 44566022 44566132 -75718180 + RSINE1 SINE B4 25 135 -30 1 925 279 0 0 0 chr13 44566132 44566163 -75718149 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 925 543 237 62 41 chr13 44567635 44567780 -75716532 + B1F2 SINE Alu 2 149 0 1 925 396 0 0 0 chr13 44568149 44568193 -75716119 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 925 756 241 6 16 chr13 44568234 44568403 -75715909 + ID_B1 SINE B4 78 244 -48 1 925 215 257 13 67 chr13 44568404 44568479 -75715833 + GA-rich Low_complexity Low_complexity 3 73 0 1 925 463 302 161 59 chr13 44568783 44569261 -75715051 - MER34A LTR ERV1 0 571 45 1 925 264 258 124 0 chr13 44569719 44569808 -75714504 + Charlie22a DNA MER1_type 380 479 -12 1 925 325 223 202 0 chr13 44569989 44570083 -75714229 + B1F SINE Alu 2 114 -35 1 925 712 256 88 65 chr13 44570102 44570365 -75713947 + B4A SINE B4 2 270 -22 1 925 297 75 0 0 chr13 44570716 44570756 -75713556 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 925 446 49 0 16 chr13 44571628 44571690 -75712622 + (TTTC)n Simple_repeat Simple_repeat 4 64 0 1 925 857 212 124 0 chr13 44571690 44571883 -75712429 - ID_B1 SINE B4 0 224 8 1 925 699 46 0 0 chr13 44571887 44571974 -75712338 + (TTCC)n Simple_repeat Simple_repeat 4 90 0 1 925 628 289 53 10 chr13 44572541 44572747 -75711565 + ID_B1 SINE B4 2 216 -8 1 925 2226 171 38 0 chr13 44573490 44573888 -75710424 - MTC LTR MaLR -8 413 1 1 925 230 308 194 43 chr13 44573891 44574030 -75710282 + LTR88a LTR Gypsy 657 816 0 1 925 4343 49 2 0 chr13 44574195 44574706 -75709606 - LTRIS3 LTR ERV1 0 512 1 1 925 521 246 36 29 chr13 44575144 44575282 -75709030 + B1F SINE Alu 3 141 -8 1 925 674 304 56 9 chr13 44576158 44576374 -75707938 + MER2 DNA MER2_type 8 233 -112 1 925 837 134 0 0 chr13 44576524 44576748 -75707564 + (GA)n Simple_repeat Simple_repeat 1 224 0 1 925 334 233 84 37 chr13 44577832 44577939 -75706373 + MER5A1 DNA MER1_type 15 126 -40 1 925 400 292 88 75 chr13 44578118 44578425 -75705887 - ORR1E LTR MaLR -48 311 1 1 925 198 0 0 0 chr13 44578429 44578451 -75705861 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 1 925 392 276 85 16 chr13 44578473 44578536 -75705776 - B1F SINE Alu -1 148 80 1 925 447 19 0 0 chr13 44578536 44578588 -75705724 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 1 925 392 276 85 16 chr13 44578588 44578653 -75705659 - B1F SINE Alu -70 79 12 1 925 546 148 69 62 chr13 44578611 44578741 -75705571 + B1_Mus2 SINE Alu 15 145 -2 1 925 621 0 0 0 chr13 44578741 44578810 -75705502 + (GAA)n Simple_repeat Simple_repeat 2 70 0 1 925 1043 191 167 8 chr13 44578930 44579083 -75705229 + MTC LTR MaLR 1 189 -195 1 925 745 84 17 0 chr13 44579083 44579202 -75705110 + (TC)n Simple_repeat Simple_repeat 2 122 0 1 925 1324 152 59 26 chr13 44579202 44579490 -75704822 + MTC LTR MaLR 190 407 -14 1 925 288 0 0 0 chr13 44579490 44579522 -75704790 + (A)n Simple_repeat Simple_repeat 1 32 0 1 925 494 267 36 15 chr13 44580865 44581002 -75703310 - MER63C DNA AcHobo -154 776 637 1 925 310 320 116 17 chr13 44581118 44581224 -75703088 - MER63C DNA AcHobo -325 605 491 1 925 197 33 33 0 chr13 44581224 44581254 -75703058 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 925 310 320 116 17 chr13 44581254 44581319 -75702993 - MER63C DNA AcHobo -440 490 417 1 925 25 51 0 0 chr13 44581320 44581359 -75702953 + AT_rich Low_complexity Low_complexity 1 39 0 1 925 999 207 35 0 chr13 44581359 44581557 -75702755 - B3 SINE B2 -5 211 7 1 925 324 0 0 0 chr13 44581624 44581660 -75702652 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 925 413 303 66 97 chr13 44581661 44581965 -75702347 - B4A SINE B4 -20 272 2 1 925 429 20 0 0 chr13 44582226 44582276 -75702036 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 925 810 297 74 85 chr13 44582287 44582753 -75701559 - L1MA5 LINE L1 -386 5914 5452 1 925 1209 116 28 0 chr13 44582753 44582770 -75701542 - B2_Mm2 SINE B2 -8 187 169 1 925 360 94 0 0 chr13 44582770 44582823 -75701489 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 925 1209 116 28 0 chr13 44582823 44582986 -75701326 - B2_Mm2 SINE B2 -27 168 3 1 925 810 281 120 28 chr13 44582986 44583208 -75701104 - L1MA5 LINE L1 -849 5451 5208 1 925 634 332 22 36 chr13 44583245 44583467 -75700845 - MER58A DNA MER1_type -1 223 5 1 925 253 260 0 0 chr13 44583471 44583521 -75700791 - MER63C DNA AcHobo -517 413 364 1 925 3320 21 39 0 chr13 44583584 44583965 -75700347 + MTA_Mm LTR MaLR 1 396 0 1 925 9322 32 3 2 chr13 44583965 44585060 -75699252 + MTA_Mm-int LTR MaLR 1 1096 -2 1 925 3320 21 39 0 chr13 44585062 44585443 -75698869 + MTA_Mm LTR MaLR 1 396 0 1 925 342 0 0 0 chr13 44585654 44585692 -75698620 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 925 191 178 22 22 chr13 44585706 44585752 -75698560 + L2 LINE L2 2536 2581 -838 1 925 451 295 0 0 chr13 44585941 44586046 -75698266 - MER63C DNA AcHobo -822 108 4 1 925 219 103 0 0 chr13 44586918 44586957 -75697355 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 1 925 181 200 0 48 chr13 44587646 44587709 -75696603 + CT-rich Low_complexity Low_complexity 4 63 0 1 925 441 54 0 0 chr13 44588192 44588248 -75696064 + (GGA)n Simple_repeat Simple_repeat 2 57 0 1 925 409 244 37 0 chr13 44588295 44588377 -75695935 + B1F SINE Alu 39 123 -26 1 925 361 313 30 0 chr13 44588377 44588394 -75695918 + ID_B1 SINE B4 120 221 -3 1 925 590 235 7 35 chr13 44588410 44588551 -75695761 + B1_Mur2 SINE Alu 11 147 -2 1 925 351 246 106 73 chr13 44588616 44588739 -75695573 + B4 SINE B4 166 292 0 1 925 203 29 0 81 chr13 44588757 44588794 -75695518 + (TGGGGG)n Simple_repeat Simple_repeat 3 36 0 1 925 207 69 0 0 chr13 44588805 44588834 -75695478 + (GGA)n Simple_repeat Simple_repeat 2 30 0 1 925 304 340 75 30 chr13 44589519 44589719 -75694593 + MLT1K LTR MaLR 371 579 -16 1 925 390 147 0 0 chr13 44589764 44589832 -75694480 + (TC)n Simple_repeat Simple_repeat 1 68 0 1 925 626 323 96 36 chr13 44590323 44590625 -75693687 + MLT1A0 LTR MaLR 1 320 -45 1 925 537 234 7 54 chr13 44590792 44590941 -75693371 + RSINE1 SINE B4 3 144 -21 1 925 314 250 130 37 chr13 44591428 44591536 -75692776 + PB1D7 SINE Alu 3 120 0 1 925 220 188 0 0 chr13 44591599 44591647 -75692665 - RSINE1 SINE B4 -115 50 3 1 925 207 292 252 0 chr13 44592215 44592362 -75691950 + MIR SINE MIR 53 236 -26 1 925 431 309 0 0 chr13 44592445 44592555 -75691757 + PB1D10 SINE Alu 1 110 -7 1 925 445 219 292 49 chr13 44593440 44593666 -75690646 + B4 SINE B4 4 284 -8 1 925 213 65 0 0 chr13 44593692 44593723 -75690589 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 925 2794 88 36 3 chr13 44593866 44594253 -75690059 - MTB LTR MaLR 0 400 1 1 925 227 174 14 55 chr13 44594283 44594356 -75689956 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 925 345 285 52 37 chr13 44594959 44595094 -75689218 + MamRep434 DNA TcMar 138 274 -152 1 925 255 61 0 0 chr13 44595400 44595433 -75688879 + (CCCTAA)n Simple_repeat Simple_repeat 1 33 0 1 925 253 241 10 103 chr13 44595443 44595540 -75688772 - BC1_Mm scRNA scRNA -53 99 12 1 925 320 274 36 22 chr13 44595806 44595944 -75688368 + L1MC4 LINE L1 6944 7083 -959 1 925 1129 62 7 20 chr13 44596212 44596361 -75687951 + B1_Mm SINE Alu 1 147 0 1 925 597 94 0 0 chr13 44596361 44596446 -75687866 + (A)n Simple_repeat Simple_repeat 1 85 0 1 925 1251 58 107 17 chr13 44596609 44596786 -75687526 + B2_Mm2 SINE B2 2 194 -1 1 925 248 286 14 0 chr13 44596825 44596895 -75687417 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 925 299 197 197 0 chr13 44597068 44597129 -75687183 - RSINE1 SINE B4 -19 146 74 1 925 627 14 0 0 chr13 44597702 44597774 -75686538 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 925 198 0 0 0 chr13 44597774 44597795 -75686517 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 925 189 0 0 0 chr13 44598256 44598277 -75686035 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 925 180 0 0 0 chr13 44598915 44598935 -75685377 + (TAA)n Simple_repeat Simple_repeat 1 20 0 1 925 577 294 38 73 chr13 44599277 44599593 -75684719 + L1M4 LINE L1 4360 4664 -1476 1 925 777 276 111 88 chr13 44600207 44600512 -75683800 + L1M4 LINE L1 4664 4992 -1154 1 925 998 133 0 26 chr13 44600512 44600666 -75683646 + B1_Mur4 SINE Alu 1 150 0 1 925 777 276 111 88 chr13 44600666 44600908 -75683404 + L1M4 LINE L1 4993 5224 -922 1 925 721 249 34 17 chr13 44601213 44601389 -75682923 - MTE2b LTR MaLR -200 179 1 1 925 301 172 0 45 chr13 44602027 44602094 -75682218 + PB1D7 SINE Alu 1 64 -56 1 925 342 0 0 0 chr13 44602215 44602253 -75682059 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 925 255 125 0 0 chr13 44602253 44602292 -75682020 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 925 378 42 0 0 chr13 44602830 44602878 -75681434 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 1 925 214 240 60 0 chr13 44603456 44603506 -75680806 - L2 LINE L2 -1570 1849 1797 2 925 1279 137 0 44 chr13 44603996 44604202 -75680110 + URR1A DNA MER1_type 30 226 0 2 925 1308 123 52 0 chr13 44604464 44604708 -75679604 + L1Md_F2 LINE L1 6360 6582 0 2 925 180 111 0 0 chr13 44604730 44604757 -75679555 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 2 925 234 293 110 138 chr13 44605643 44605861 -75678451 + ORR1E LTR MaLR 100 311 -48 2 925 392 0 21 0 chr13 44606020 44606068 -75678244 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 925 1619 142 65 101 chr13 44606091 44606427 -75677885 + ORR1B1 LTR MaLR 41 364 -30 2 925 251 310 0 0 chr13 44606485 44606543 -75677769 + polypyrimidine Low_complexity Low_complexity 4 61 0 2 925 417 241 181 44 chr13 44606549 44606753 -75677559 - B4 SINE B4 -60 232 1 2 925 596 234 21 0 chr13 44606948 44607089 -75677223 - B1F SINE Alu -1 148 5 2 925 583 255 0 0 chr13 44607161 44607267 -75677045 + B3A SINE B2 19 124 -74 2 925 327 113 0 0 chr13 44607283 44607336 -75676976 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 925 582 216 72 0 chr13 44607657 44607782 -75676530 + B1F SINE Alu 16 149 0 2 925 248 214 0 28 chr13 44608344 44608416 -75675896 + GA-rich Low_complexity Low_complexity 1 70 0 2 925 201 328 0 0 chr13 44608573 44608631 -75675681 + (CGTG)n Simple_repeat Simple_repeat 1 58 0 2 925 548 226 23 38 chr13 44608640 44608759 -75675553 - ID_B1 SINE B4 -4 220 99 2 925 279 0 0 0 chr13 44608759 44608790 -75675522 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 925 548 226 23 38 chr13 44608790 44608803 -75675509 - ID_B1 SINE B4 -126 98 90 2 925 214 224 147 15 chr13 44608853 44608921 -75675391 - ID4_ SINE ID -5 78 2 2 925 292 279 12 37 chr13 44609544 44609626 -75674686 + MADE2 DNA Mariner 1 80 0 2 925 278 309 57 93 chr13 44609775 44609968 -75674344 + MER20 DNA MER1_type 15 200 -19 2 925 770 269 53 62 chr13 44610269 44610495 -75673817 + ID_B1 SINE B4 1 224 0 2 925 288 0 0 0 chr13 44610692 44610724 -75673588 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 2 925 1115 65 14 0 chr13 44610735 44610874 -75673438 - B1_Mus2 SINE Alu -6 141 1 2 925 747 85 0 0 chr13 44610879 44610973 -75673339 - 4.5SRNA scRNA scRNA 0 94 1 2 925 538 217 30 30 chr13 44610973 44611070 -75673242 - URR1A DNA MER1_type -23 203 107 2 925 1544 129 41 8 chr13 44611070 44611336 -75672976 - RLTR11A LTR ERVK 0 528 254 2 925 1565 111 9 0 chr13 44611344 44611569 -75672743 + RLTR11B LTR ERVK 227 453 0 2 925 749 178 16 0 chr13 44611569 44611678 -75672634 - URR1A DNA MER1_type -115 111 1 2 925 411 21 0 0 chr13 44612640 44612688 -75671624 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 2 925 183 42 0 0 chr13 44612981 44613005 -75671307 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 925 194 57 57 0 chr13 44613045 44613080 -75671232 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 2 925 1258 48 0 0 chr13 44613488 44613635 -75670677 + B1_Mus2 SINE Alu 1 147 0 2 925 195 42 0 0 chr13 44613637 44613661 -75670651 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 2 925 280 302 83 45 chr13 44613908 44614064 -75670248 - MER113 DNA MER1_type -61 460 299 2 925 247 95 47 23 chr13 44614134 44614177 -75670135 + PB1D9 SINE Alu 75 118 -2 2 925 234 191 0 0 chr13 44614187 44614234 -75670078 + GA-rich Low_complexity Low_complexity 3 49 0 2 925 263 383 37 12 chr13 44614255 44614419 -75669893 - MER113 DNA MER1_type -320 201 34 2 925 329 287 63 11 chr13 44614654 44614749 -75669563 + B1F1 SINE Alu 36 135 -14 2 925 461 188 12 12 chr13 44615521 44615607 -75668705 - MER34A1 LTR ERV1 -19 568 483 2 925 333 0 0 0 chr13 44616151 44616188 -75668124 + (CCCCCA)n Simple_repeat Simple_repeat 6 42 0 2 925 230 307 17 34 chr13 44616292 44616410 -75667902 + PB1D10 SINE Alu 2 117 0 2 925 756 155 0 0 chr13 44617450 44617592 -75666720 + (TTGG)n Simple_repeat Simple_repeat 4 145 0 2 925 484 246 0 43 chr13 44617596 44617711 -75666601 - B1F SINE Alu -2 147 38 2 925 180 0 0 0 chr13 44617711 44617731 -75666581 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 925 189 0 0 0 chr13 44618767 44618788 -75665524 + (T)n Simple_repeat Simple_repeat 1 21 0 2 925 497 259 91 41 chr13 44619085 44619282 -75665030 + MER34A LTR ERV1 350 556 -15 2 925 311 311 9 19 chr13 44619480 44619630 -75664682 + CT-rich Low_complexity Low_complexity 1 148 0 2 925 360 170 0 0 chr13 44619684 44619737 -75664575 - RSINE1 SINE B4 -109 56 4 2 925 303 311 93 9 chr13 44619750 44619857 -75664455 - L1MC1 LINE L1 -36 6297 6182 2 925 424 322 32 23 chr13 44619955 44619969 -75664343 - L1MC3 LINE L1 -188 7597 7584 2 925 855 175 155 21 chr13 44619969 44620156 -75664156 - B3 SINE B2 -2 214 3 2 925 424 322 32 23 chr13 44620156 44620357 -75663955 - L1MC3 LINE L1 -202 7583 7380 2 925 623 273 103 76 chr13 44620447 44620776 -75663536 - ORR1E LTR MaLR 0 359 22 2 925 420 276 39 13 chr13 44620779 44620933 -75663379 - L1MC3 LINE L1 -517 7268 7111 2 925 353 287 60 139 chr13 44620939 44621206 -75663106 - L1MC3 LINE L1 -789 6996 6751 2 925 347 291 24 1 chr13 44621402 44621512 -75662800 - B1F1 SINE Alu -1 116 4 2 925 328 231 0 71 chr13 44621709 44621779 -75662533 - ID4 SINE ID -18 65 1 2 925 664 305 142 37 chr13 44621891 44622187 -75662125 - MTEa LTR MaLR -52 327 1 2 925 877 238 42 87 chr13 44622189 44622433 -75661879 - MTEa-int LTR MaLR -2 1578 1351 2 925 230 0 33 0 chr13 44622433 44622463 -75661849 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 925 877 238 42 87 chr13 44622463 44622504 -75661808 - MTEa-int LTR MaLR -230 1350 1306 2 925 388 241 121 0 chr13 44622513 44622596 -75661716 - RSINE1 SINE B4 -70 95 3 2 925 195 281 87 33 chr13 44623002 44623094 -75661218 - MIRc SINE MIR -111 157 61 2 925 200 318 14 43 chr13 44623232 44623301 -75661011 - L2c LINE L2 -37 3350 3284 2 925 1193 61 0 0 chr13 44623303 44623450 -75660862 + B1_Mus2 SINE Alu 1 147 0 2 925 216 0 0 0 chr13 44623497 44623521 -75660791 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 925 561 268 64 19 chr13 44623528 44623684 -75660628 + RSINE1 SINE B4 3 165 0 2 925 990 124 0 27 chr13 44623731 44623914 -75660398 + GA-rich Low_complexity Low_complexity 3 180 0 2 925 378 0 0 0 chr13 44623917 44623959 -75660353 + (GAGAA)n Simple_repeat Simple_repeat 1 42 0 2 925 236 264 103 63 chr13 44624151 44624325 -75659987 + MER90 LTR ERV1 65 245 -330 2 925 267 375 71 19 chr13 44624373 44624528 -75659784 + MER34 LTR ERV1 375 537 -5 2 925 255 277 0 15 chr13 44625292 44625358 -75658954 - BC1_Mm scRNA scRNA -71 81 17 2 925 580 254 93 15 chr13 44625889 44626030 -75658282 + B3A SINE B2 1 151 -47 2 925 185 94 31 0 chr13 44626030 44626062 -75658250 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 925 302 281 73 109 chr13 44626062 44626112 -75658200 + B2_Mm2 SINE B2 139 185 -10 2 925 412 225 11 39 chr13 44626938 44627045 -75657267 + B1F SINE Alu 20 120 0 2 925 788 268 123 23 chr13 44627067 44627327 -75656985 + B4A SINE B4 4 289 -3 2 925 420 253 11 0 chr13 44627329 44627420 -75656892 + ORR1D1 LTR MaLR 1 92 -282 2 925 270 0 0 0 chr13 44627420 44627450 -75656862 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 925 1050 143 11 33 chr13 44627458 44627639 -75656673 + ORR1D1 LTR MaLR 198 374 0 2 925 432 0 0 0 chr13 44627711 44627759 -75656553 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 925 1011 61 0 0 chr13 44627933 44628064 -75656248 + (GGAGA)n Simple_repeat Simple_repeat 5 135 0 2 925 21 71 0 0 chr13 44628706 44628748 -75655564 + AT_rich Low_complexity Low_complexity 1 42 0 2 925 640 259 0 0 chr13 44628748 44628879 -75655433 + B1F SINE Alu 19 149 0 2 925 620 123 122 9 chr13 44628881 44628988 -75655324 + PB1D9 SINE Alu 2 120 0 2 925 215 288 228 81 chr13 44629024 44629098 -75655214 + RSINE1 SINE B4 8 98 -67 2 925 456 19 0 0 chr13 44629098 44629151 -75655161 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 925 215 288 228 81 chr13 44629151 44629212 -75655100 + RSINE1 SINE B4 99 162 -3 2 925 576 77 0 0 chr13 44629215 44629293 -75655019 + (TAGA)n Simple_repeat Simple_repeat 1 78 0 2 925 655 286 25 25 chr13 44629303 44629504 -75654808 - Lx5 LINE L1 0 7050 6850 2 925 696 200 269 12 chr13 44629658 44629825 -75654487 - B3 SINE B2 -6 210 1 2 925 298 330 17 34 chr13 44629979 44630098 -75654214 - ORR1E LTR MaLR -240 119 3 2 925 309 125 0 0 chr13 44631392 44631448 -75652864 + (T)n Simple_repeat Simple_repeat 1 56 0 2 925 1213 54 0 0 chr13 44631449 44631596 -75652716 - B1_Mm SINE Alu 0 147 1 2 925 876 209 6 22 chr13 44631733 44631914 -75652398 + B3A SINE B2 3 180 -18 2 925 264 174 52 113 chr13 44632501 44632598 -75651714 + MLT1A1 LTR MaLR 318 408 0 2 925 211 261 0 0 chr13 44633179 44633225 -75651087 - MER5A DNA MER1_type -85 104 59 2 925 433 231 209 0 chr13 44633413 44633547 -75650765 + MLT1B LTR MaLR 18 179 -211 2 925 299 292 83 0 chr13 44633585 44633681 -75650631 + ID_B1 SINE B4 56 159 -65 2 925 434 337 86 52 chr13 44634237 44634506 -75649806 + ORR1E LTR MaLR 80 357 -2 2 925 324 213 67 0 chr13 44634608 44634683 -75649629 - ORR1E LTR MaLR -279 80 1 2 925 710 257 116 20 chr13 44634877 44635127 -75649185 + L1MA4A LINE L1 5509 5782 -509 2 925 848 177 160 11 chr13 44635130 44635318 -75648994 + B3 SINE B2 1 216 0 2 925 338 294 16 8 chr13 44635422 44635549 -75648763 + L1MA4A LINE L1 5812 5939 -364 2 925 411 145 0 0 chr13 44635562 44635631 -75648681 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 925 272 333 13 13 chr13 44635661 44635740 -75648572 + PB1D10 SINE Alu 1 79 -38 2 925 459 238 39 47 chr13 44636287 44636415 -75647897 - RSINE1 SINE B4 -35 130 4 2 925 667 277 58 0 chr13 44636415 44636569 -75647743 + B4 SINE B4 6 168 -124 2 925 251 169 27 27 chr13 44637413 44637430 -75646882 + T-rich Low_complexity Low_complexity 60 76 0 2 925 1476 64 5 0 chr13 44637430 44637618 -75646694 - B2_Mm1t SINE B2 -3 190 2 2 925 251 169 27 27 chr13 44637618 44637673 -75646639 + T-rich Low_complexity Low_complexity 4 59 0 2 925 1263 35 0 0 chr13 44637674 44637818 -75646494 - B1_Mm SINE Alu 0 147 4 3 925 962 316 18 66 chr13 44637897 44638351 -75645961 + L1M3 LINE L1 5369 5800 -371 3 925 696 256 89 0 chr13 44638383 44638586 -75645726 + ID_B1 SINE B4 1 221 -3 3 925 442 291 67 0 chr13 44639271 44639405 -75644907 + ID_B1 SINE B4 82 224 0 3 925 1040 107 0 0 chr13 44639423 44639563 -75644749 + B1_Mur4 SINE Alu 3 142 -8 3 925 289 266 0 0 chr13 44639620 44639684 -75644628 + tRNA-Ala-GCY_ tRNA tRNA 5 68 -7 3 925 258 125 0 0 chr13 44639686 44639734 -75644578 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 925 319 238 12 24 chr13 44639920 44640002 -75644310 - MER57A-int LTR ERV1 -303 5884 5804 3 925 387 0 0 0 chr13 44640624 44640667 -75643645 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 925 225 0 0 0 chr13 44640964 44640989 -75643323 + (T)n Simple_repeat Simple_repeat 1 25 0 3 925 1217 48 7 0 chr13 44640989 44641135 -75643177 - B1_Mus2 SINE Alu 0 147 1 3 925 538 305 69 30 chr13 44641402 44641635 -75642677 + B4A SINE B4 47 288 -4 3 925 318 182 0 0 chr13 44641641 44641707 -75642605 + (CATA)n Simple_repeat Simple_repeat 1 66 0 3 925 297 0 0 0 chr13 44641916 44641949 -75642363 + (T)n Simple_repeat Simple_repeat 1 33 0 3 925 732 179 7 35 chr13 44641985 44642130 -75642182 + B1_Mus1 SINE Alu 1 141 -7 3 925 217 128 0 41 chr13 44642139 44642188 -75642124 + GA-rich Low_complexity Low_complexity 4 50 0 3 925 1755 177 33 84 chr13 44643649 44644043 -75640269 + ORR1D1 LTR MaLR 1 374 0 3 925 327 310 90 0 chr13 44644141 44644241 -75640071 + B1F SINE Alu 34 142 -7 3 925 725 231 184 48 chr13 44644249 44644499 -75639813 + B4 SINE B4 2 285 -7 3 925 278 281 70 105 chr13 44644539 44644682 -75639630 - MTD LTR MaLR -281 138 1 3 925 210 296 0 0 chr13 44644685 44644739 -75639573 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 925 211 264 19 0 chr13 44644820 44644873 -75639439 + C-rich Low_complexity Low_complexity 5 58 0 3 925 331 268 21 50 chr13 44645042 44645163 -75639149 - MLT1G LTR MaLR -364 231 124 3 925 1154 251 189 19 chr13 44646619 44647095 -75637217 - Lx9 LINE L1 -25 7619 7063 3 925 458 290 9 0 chr13 44647246 44647353 -75636959 + ID_B1 SINE B4 81 188 -36 3 925 416 300 63 118 chr13 44647480 44647862 -75636450 + ORR1D2 LTR MaLR 7 367 -3 3 925 318 115 0 0 chr13 44648022 44648074 -75636238 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 925 392 311 10 10 chr13 44648074 44648178 -75636134 - PB1D10 SINE Alu -12 105 2 3 925 315 0 0 0 chr13 44648263 44648298 -75636014 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 925 227 321 74 19 chr13 44648392 44648500 -75635812 - LTR82A LTR ERVL -96 776 663 3 925 1912 241 36 40 chr13 44648629 44649151 -75635161 - MER34A LTR ERV1 -49 522 3 3 925 338 373 134 14 chr13 44649151 44649365 -75634947 - LTR82A LTR ERVL -411 461 221 3 925 340 291 78 47 chr13 44649548 44649739 -75634573 + L1M2 LINE L1 5561 5757 -543 3 925 316 311 92 33 chr13 44649778 44649931 -75634381 - RSINE1 SINE B4 -2 163 2 3 925 441 0 0 0 chr13 44650054 44650103 -75634209 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 3 925 296 247 64 13 chr13 44650377 44650455 -75633857 - PB1D7 SINE Alu -3 117 36 3 925 270 0 0 0 chr13 44650512 44650542 -75633770 + (A)n Simple_repeat Simple_repeat 1 30 0 3 925 600 226 24 16 chr13 44650679 44650805 -75633507 - B1_Mur4 SINE Alu -1 149 23 3 925 437 260 62 8 chr13 44651055 44651183 -75633129 + B4A SINE B4 158 292 0 3 925 261 139 0 0 chr13 44651204 44651247 -75633065 + (CACG)n Simple_repeat Simple_repeat 3 45 0 3 925 343 286 5 47 chr13 44651338 44651436 -75632876 + PB1D10 SINE Alu 1 97 -52 3 925 471 310 147 15 chr13 44651891 44652243 -75632069 - LTR48 LTR ERV1 -41 746 147 3 925 313 195 12 94 chr13 44653053 44653138 -75631174 + RSINE1 SINE B4 88 165 0 3 925 317 222 95 57 chr13 44653203 44653308 -75631004 + PB1D10 SINE Alu 9 117 0 3 925 583 298 55 58 chr13 44653323 44653615 -75630697 + B4A SINE B4 1 291 -1 3 925 251 356 47 19 chr13 44654060 44654166 -75630146 - MIRb SINE MIR -45 223 115 3 925 26 0 0 0 chr13 44654548 44654574 -75629738 + AT_rich Low_complexity Low_complexity 1 26 0 3 925 245 226 0 45 chr13 44654904 44654936 -75629376 + polypurine Low_complexity Low_complexity 1 30 0 3 925 1697 196 195 26 chr13 44654936 44655392 -75628920 - RMER16 LTR ERVK 0 533 1 3 925 224 257 0 67 chr13 44655392 44655434 -75628878 + polypurine Low_complexity Low_complexity 35 72 0 3 925 329 77 0 37 chr13 44655434 44655488 -75628824 + (GGGA)n Simple_repeat Simple_repeat 2 53 0 3 925 291 285 128 28 chr13 44655667 44655808 -75628504 + MER112 DNA MER1_type 1 155 -106 3 925 682 267 35 40 chr13 44655923 44656122 -75628190 + B3A SINE B2 1 198 0 3 925 367 253 0 0 chr13 44656596 44656671 -75627641 + PB1D10 SINE Alu 43 117 0 3 925 2419 165 55 23 chr13 44656698 44657200 -75627112 - RMER4B LTR ERVK -9 457 1 3 925 1389 41 58 12 chr13 44657321 44657492 -75626820 + B2_Mm2 SINE B2 1 179 -16 3 925 189 0 0 0 chr13 44657495 44657516 -75626796 + (GGAA)n Simple_repeat Simple_repeat 3 23 0 3 925 950 224 41 50 chr13 44657834 44658055 -75626257 + ID_B1 SINE B4 6 224 0 3 925 248 298 52 75 chr13 44658145 44658279 -75626033 - ORR1E LTR MaLR -175 184 54 3 925 207 0 0 0 chr13 44659712 44659735 -75624577 + (T)n Simple_repeat Simple_repeat 1 23 0 3 925 206 317 137 10 chr13 44659898 44660000 -75624312 - L2c LINE L2 -6 3381 3267 3 925 827 142 234 34 chr13 44660577 44660752 -75623560 - B3 SINE B2 -6 210 1 3 925 1383 152 107 77 chr13 44660930 44661321 -75622991 - RMER17C LTR ERVK -7 403 1 3 925 814 312 92 14 chr13 44661329 44661677 -75622635 + MTEa LTR MaLR 1 375 -4 3 925 883 254 65 104 chr13 44661735 44661918 -75622394 - MLT1E3 LTR MaLR -16 608 425 3 925 1245 129 114 0 chr13 44661918 44662120 -75622192 + URR1A DNA MER1_type 1 225 -1 3 925 883 318 35 127 chr13 44662120 44662256 -75622056 - MLT1E3 LTR MaLR -178 446 317 3 925 364 254 25 58 chr13 44662256 44662377 -75621935 + PB1D7 SINE Alu 3 119 -1 3 925 883 318 35 127 chr13 44662377 44662399 -75621913 - MLT1E3 LTR MaLR -308 316 305 3 925 648 216 64 0 chr13 44662399 44662524 -75621788 + B1_Mur2 SINE Alu 1 133 -16 3 925 883 318 35 127 chr13 44662524 44662853 -75621459 - MLT1E3 LTR MaLR -320 304 10 3 925 384 119 0 0 chr13 44663121 44663180 -75621132 + (TC)n Simple_repeat Simple_repeat 1 59 0 3 925 208 420 0 0 chr13 44663299 44663368 -75620944 + MIRb SINE MIR 1 69 -199 3 925 417 259 56 49 chr13 44663501 44663643 -75620669 + ID_B1 SINE B4 63 205 -19 3 925 1114 202 62 129 chr13 44665241 44665644 -75618668 + ORR1C2 LTR MaLR 1 376 -8 3 925 326 240 158 50 chr13 44666119 44666220 -75618092 + ID_B1 SINE B4 113 224 0 3 925 1965 120 8 74 chr13 44666624 44666976 -75617336 + ORR1A4 LTR MaLR 1 329 0 3 925 490 298 16 8 chr13 44667015 44667137 -75617175 + ID_B1 SINE B4 94 216 -8 3 925 225 305 80 51 chr13 44667029 44667167 -75617145 - YREP_Mm Unknown Unknown -1522 290 149 3 925 552 296 74 0 chr13 44667498 44667633 -75616679 - B1F SINE Alu -3 146 2 3 925 27 0 0 0 chr13 44667635 44667662 -75616650 + AT_rich Low_complexity Low_complexity 1 27 0 3 925 283 262 0 15 chr13 44667675 44667741 -75616571 - RSINE1 SINE B4 -28 137 73 3 925 261 139 0 0 chr13 44668216 44668259 -75616053 + (ATG)n Simple_repeat Simple_repeat 1 43 0 3 925 241 257 216 60 chr13 44668300 44668376 -75615936 + ID_B1 SINE B4 81 214 -10 3 925 258 150 0 0 chr13 44668376 44668416 -75615896 + B1F SINE Alu 100 139 -10 3 925 252 253 71 81 chr13 44668401 44668423 -75615889 + ZP3AR Satellite Satellite 16 58 -154 3 925 325 211 0 0 chr13 44668423 44668475 -75615837 + ID4_ SINE ID 2 53 -30 3 925 252 253 71 81 chr13 44668475 44668500 -75615812 + ZP3AR Satellite Satellite 59 113 -99 3 925 539 279 23 8 chr13 44669153 44669283 -75615029 + B1F SINE Alu 13 144 -5 3 925 236 233 0 0 chr13 44669308 44669351 -75614961 + ID4_ SINE ID 15 57 -26 3 925 339 279 194 0 chr13 44669360 44669489 -75614823 + HAL1-3A_ME LINE L1 2284 2437 -421 3 925 421 296 76 46 chr13 44669667 44669764 -75614548 - RSINE1 SINE B4 -29 136 35 3 925 3567 25 0 0 chr13 44669764 44670160 -75614152 - MTA_Mm LTR MaLR 0 396 1 3 925 421 296 76 46 chr13 44670160 44670193 -75614119 - RSINE1 SINE B4 -131 34 2 3 925 23 54 0 0 chr13 44670195 44670232 -75614080 + AT_rich Low_complexity Low_complexity 1 37 0 3 925 184 265 55 101 chr13 44670285 44670394 -75613918 - MIRb SINE MIR -110 158 55 3 925 243 286 0 73 chr13 44670458 44670526 -75613786 + B4A SINE B4 83 145 -147 3 925 304 297 69 0 chr13 44670470 44670571 -75613741 + PB1D9 SINE Alu 5 112 -8 3 925 501 234 37 18 chr13 44670584 44670693 -75613619 + RSINE1 SINE B4 7 117 -48 3 925 312 27 0 0 chr13 44670706 44670743 -75613569 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 925 261 0 0 0 chr13 44670743 44670771 -75613541 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 925 2014 185 83 52 chr13 44670787 44671215 -75613097 + MT2A LTR ERVL 1 442 -91 3 925 2944 131 48 25 chr13 44671215 44671731 -75612581 + RLTR11A LTR ERVK 1 528 0 3 925 2014 185 83 52 chr13 44671731 44671747 -75612565 + MT2A LTR ERVL 443 458 -75 3 925 609 76 0 0 chr13 44671747 44671839 -75612473 + (TG)n Simple_repeat Simple_repeat 1 92 0 3 925 869 143 29 0 chr13 44671892 44672032 -75612280 + B1_Mur4 SINE Alu 7 150 0 3 925 345 293 92 72 chr13 44671895 44672090 -75612222 + B4A SINE B4 94 292 0 3 925 1227 54 0 7 chr13 44672137 44672286 -75612026 + B1_Mus1 SINE Alu 1 148 0 4 925 240 59 0 0 chr13 44672287 44672321 -75611991 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 4 925 1411 151 4 27 chr13 44673183 44673408 -75610904 + URR1A DNA MER1_type 7 226 0 4 925 366 269 99 70 chr13 44674048 44674180 -75610132 + ORR1E LTR MaLR 15 151 -208 4 925 3392 134 42 6 chr13 44674180 44674727 -75609585 - RMER4B LTR ERVK 0 585 19 4 925 451 244 122 22 chr13 44674729 44674909 -75609403 + ORR1E LTR MaLR 128 325 -34 4 925 446 90 0 30 chr13 44674942 44675059 -75609253 - B2_Mm2 SINE B2 -1 194 47 4 925 1108 79 97 6 chr13 44675072 44675237 -75609075 - B2_Mm2 SINE B2 -14 181 2 4 925 453 204 118 149 chr13 44675975 44676136 -75608176 - MTEa LTR MaLR -13 366 211 4 925 180 224 0 39 chr13 44676167 44676218 -75608094 + MIRb SINE MIR 217 265 -3 4 925 432 274 89 30 chr13 44676295 44676464 -75607848 + ID_B1 SINE B4 26 204 -20 4 925 231 217 0 0 chr13 44676489 44676549 -75607763 + GA-rich Low_complexity Low_complexity 1 60 0 4 925 490 125 62 0 chr13 44676819 44676899 -75607413 + B1_Mur2 SINE Alu 39 123 -26 4 925 23 54 0 0 chr13 44677028 44677065 -75607247 + AT_rich Low_complexity Low_complexity 1 37 0 4 925 222 196 54 0 chr13 44677830 44677886 -75606426 + (CGTG)n Simple_repeat Simple_repeat 3 61 0 4 925 213 182 0 0 chr13 44678450 44678505 -75605807 + A-rich Low_complexity Low_complexity 1 55 0 4 925 216 97 0 0 chr13 44679179 44679210 -75605102 + (A)n Simple_repeat Simple_repeat 1 31 0 4 925 629 219 123 6 chr13 44679308 44679478 -75604834 + B3A SINE B2 5 194 -4 4 925 223 115 19 37 chr13 44679956 44680010 -75604302 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 4 925 212 122 0 24 chr13 44680006 44680048 -75604264 + (CCCCCT)n Simple_repeat Simple_repeat 6 46 0 4 925 306 312 82 9 chr13 44680729 44680839 -75603473 + MER20 DNA MER1_type 17 134 -85 4 925 346 181 48 4 chr13 44680912 44680984 -75603328 + B1F2 SINE Alu 14 86 -63 4 925 381 292 133 0 chr13 44681061 44681174 -75603138 + RSINE1 SINE B4 38 165 0 4 925 23 0 0 0 chr13 44681310 44681333 -75602979 + AT_rich Low_complexity Low_complexity 1 23 0 4 925 228 67 0 0 chr13 44681351 44681381 -75602931 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 925 896 173 0 6 chr13 44681398 44681578 -75602734 + GA-rich Low_complexity Low_complexity 2 180 0 4 925 492 277 0 37 chr13 44681589 44681724 -75602588 - RSINE1 SINE B4 -34 131 2 4 925 279 71 0 0 chr13 44681825 44681867 -75602445 + (CAGG)n Simple_repeat Simple_repeat 2 43 0 4 925 192 77 0 0 chr13 44682011 44682037 -75602275 + (ATG)n Simple_repeat Simple_repeat 1 26 0 4 925 429 70 0 0 chr13 44682064 44682121 -75602191 + (TTGG)n Simple_repeat Simple_repeat 3 59 0 4 925 329 224 52 78 chr13 44682121 44682226 -75602086 - PB1D10 SINE Alu -8 109 5 4 925 309 299 103 0 chr13 44682314 44682411 -75601901 - B1F SINE Alu -20 129 23 4 925 702 255 46 61 chr13 44682328 44682524 -75601788 - ID_B1 SINE B4 -31 193 1 4 925 211 262 32 16 chr13 44682558 44682620 -75601692 + PB1D7 SINE Alu 58 120 0 4 925 336 48 0 0 chr13 44682620 44682662 -75601650 + (GGGA)n Simple_repeat Simple_repeat 4 45 0 4 925 473 250 21 0 chr13 44682721 44682732 -75601580 - PB1D10 SINE Alu -11 106 9 4 925 483 212 24 0 chr13 44682732 44682817 -75601495 - ID_B1 SINE B4 -48 176 90 4 925 575 252 44 15 chr13 44682951 44683088 -75601224 - RSINE1 SINE B4 -22 143 3 4 925 341 323 49 25 chr13 44683164 44683326 -75600986 + L1MD LINE L1 3525 3690 -2456 4 925 271 326 133 0 chr13 44684079 44684179 -75600133 + PB1D10 SINE Alu 1 112 -5 4 925 246 62 0 0 chr13 44684179 44684211 -75600101 + (GGA)n Simple_repeat Simple_repeat 3 34 0 4 925 366 241 58 89 chr13 44684216 44684407 -75599905 + L1MD LINE L1 3900 4084 -2062 4 925 275 279 24 48 chr13 44684495 44684578 -75599734 - ID4_ SINE ID -1 82 2 4 925 555 92 0 0 chr13 44684606 44684693 -75599619 + (TG)n Simple_repeat Simple_repeat 1 87 0 4 925 255 193 19 23 chr13 44684697 44684772 -75599540 - BC1_Mm scRNA scRNA -10 73 2 4 925 472 212 252 8 chr13 44684860 44684979 -75599333 + B1F SINE Alu 2 149 0 4 925 285 75 0 0 chr13 44685019 44685059 -75599253 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 925 23 0 0 0 chr13 44685145 44685168 -75599144 + AT_rich Low_complexity Low_complexity 1 23 0 4 925 268 337 54 0 chr13 44685464 44685556 -75598756 + MamRep605 Unknown Unknown 452 548 -328 4 925 558 217 0 17 chr13 44685693 44685810 -75598502 + PB1D10 SINE Alu 2 116 -1 4 925 323 242 0 195 chr13 44685865 44685978 -75598334 - ID_B1 SINE B4 -3 221 131 4 925 500 260 0 0 chr13 44685972 44686072 -75598240 + B1F2 SINE Alu 22 121 -28 4 925 749 133 0 7 chr13 44686073 44686209 -75598103 + (TTC)n Simple_repeat Simple_repeat 1 135 0 4 925 1207 68 0 0 chr13 44686288 44686434 -75597878 + B1_Mus2 SINE Alu 2 147 0 4 925 404 279 39 0 chr13 44686610 44686714 -75597598 + LTR48 LTR ERV1 680 787 0 4 925 369 290 200 8 chr13 44686881 44687006 -75597306 + B1_Mur2 SINE Alu 1 149 0 4 925 387 267 18 126 chr13 44687483 44687650 -75596662 - B1F SINE Alu 0 149 1 4 925 818 227 9 16 chr13 44687670 44687841 -75596471 - B3 SINE B2 -23 170 1 4 925 232 263 137 89 chr13 44687915 44688061 -75596251 + MLT1B LTR MaLR 8 160 -230 4 925 200 333 62 0 chr13 44688534 44688615 -75595697 - MIRm SINE MIR -4 272 187 4 925 590 251 6 8 chr13 44688665 44688850 -75595462 - HAL1-2a_MD LINE L1 -519 2505 2347 4 925 339 181 0 0 chr13 44688850 44688922 -75595390 + (TTG)n Simple_repeat Simple_repeat 1 72 0 4 925 599 243 7 34 chr13 44688932 44689213 -75595099 - HAL1-2a_MD LINE L1 -519 2505 2331 4 925 312 257 0 0 chr13 44689214 44689327 -75594985 + (TTG)n Simple_repeat Simple_repeat 1 113 0 4 925 23 68 0 0 chr13 44689385 44689429 -75594883 + AT_rich Low_complexity Low_complexity 1 44 0 4 925 589 228 8 16 chr13 44689814 44689825 -75594487 - B1_Mur1 SINE Alu -1 148 138 4 925 243 0 0 0 chr13 44689825 44689852 -75594460 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 925 589 239 8 17 chr13 44689852 44689989 -75594323 - B1_Mur1 SINE Alu -12 137 3 4 925 321 256 15 133 chr13 44690311 44690446 -75593866 + B1F SINE Alu 12 130 -19 4 925 26 0 0 0 chr13 44690449 44690475 -75593837 + AT_rich Low_complexity Low_complexity 1 26 0 4 925 378 0 0 0 chr13 44690559 44690601 -75593711 + (GAA)n Simple_repeat Simple_repeat 1 42 0 4 925 1384 189 112 20 chr13 44690681 44691011 -75593301 - MTC LTR MaLR -2 419 5 4 925 327 234 177 15 chr13 44691139 44691269 -75593043 + RSINE1 SINE B4 2 152 -13 4 925 248 167 14 0 chr13 44691269 44691341 -75592971 + CT-rich Low_complexity Low_complexity 2 74 0 4 925 310 238 165 12 chr13 44691428 44691513 -75592799 + B4A SINE B4 107 204 -88 4 925 1236 79 90 0 chr13 44691539 44691717 -75592595 + B2_Mm2 SINE B2 1 194 -1 4 925 374 55 55 0 chr13 44691718 44691773 -75592539 + B1_Mur4 SINE Alu 92 149 -1 4 925 21 0 0 0 chr13 44691773 44691794 -75592518 + AT_rich Low_complexity Low_complexity 1 21 0 4 925 225 329 13 0 chr13 44691824 44691903 -75592409 + (CATA)n Simple_repeat Simple_repeat 4 83 0 4 925 180 300 0 0 chr13 44691929 44692009 -75592303 + (CA)n Simple_repeat Simple_repeat 1 80 0 4 925 315 0 0 0 chr13 44692754 44692789 -75591523 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 925 285 264 22 22 chr13 44692931 44693020 -75591292 - MTEa LTR MaLR 0 379 291 4 925 354 273 53 35 chr13 44693201 44693315 -75590997 + ID_B1 SINE B4 105 220 -4 4 925 261 281 0 103 chr13 44693446 44693553 -75590759 + MT2B LTR ERVL 162 257 -344 4 925 641 214 17 0 chr13 44693460 44693577 -75590735 + B1_Mur1 SINE Alu 12 130 -19 4 925 749 250 58 10 chr13 44693619 44693825 -75590487 + ID_B1 SINE B4 6 221 -3 4 925 425 217 26 23 chr13 44693832 44693964 -75590348 + B4A SINE B4 2 131 -161 4 925 4676 111 181 18 chr13 44693996 44694820 -75589492 + RMER17B LTR ERVK 1 958 0 4 925 360 0 0 0 chr13 44694880 44694920 -75589392 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 925 1116 103 212 0 chr13 44695045 44695248 -75589064 - Lx LINE L1 0 6654 6409 4 925 821 193 191 11 chr13 44695264 44695447 -75588865 + B3 SINE B2 1 216 0 4 926 257 330 46 46 chr13 44696024 44696132 -75588180 + LTR33B LTR ERVL 31 138 -365 4 926 250 316 0 0 chr13 44696319 44696376 -75587936 + tRNA-Ala-GCY_ tRNA tRNA 2 58 -17 4 926 450 252 0 70 chr13 44696427 44696542 -75587770 + PB1D10 SINE Alu 3 109 -8 4 926 361 295 143 64 chr13 44697851 44697932 -75586380 + ID_B1 SINE B4 3 219 -3 4 926 381 276 33 33 chr13 44697932 44698052 -75586260 + B1F SINE Alu 25 144 -5 4 926 403 248 16 49 chr13 44698326 44698449 -75585863 + RSINE1 SINE B4 3 121 -44 4 926 444 19 0 0 chr13 44698450 44698503 -75585809 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 926 244 314 43 0 chr13 44698704 44698774 -75585538 + AluG_3 SINE Alu 149 221 -90 4 926 193 333 61 20 chr13 44699084 44699182 -75585130 + L2a LINE L2 3314 3415 -11 4 926 263 294 0 0 chr13 44699119 44699187 -75585125 + MIR SINE MIR 195 262 0 4 926 286 221 88 0 chr13 44699469 44699537 -75584775 + B4 SINE B4 194 267 -25 4 926 210 182 0 22 chr13 44699565 44699610 -75584702 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 926 358 235 0 0 chr13 44699762 44699830 -75584482 + ID4 SINE ID 3 70 -13 5 926 293 347 32 0 chr13 44699947 44700042 -75584270 + MIR SINE MIR 30 127 -81 5 926 301 276 250 11 chr13 44700659 44700747 -75583565 + PB1D10 SINE Alu 9 117 0 5 926 192 200 0 0 chr13 44700751 44700791 -75583521 + GA-rich Low_complexity Low_complexity 3 42 0 5 926 441 311 15 8 chr13 44700859 44700980 -75583332 - MLT1A0 LTR MaLR -111 254 133 5 926 423 317 127 19 chr13 44700980 44701192 -75583120 - MLT1A LTR MaLR 0 374 140 5 926 411 326 0 143 chr13 44701194 44701362 -75582950 + B1F SINE Alu 1 144 -5 5 926 397 211 150 35 chr13 44701373 44701486 -75582826 - MLT1A LTR MaLR -234 131 6 5 926 261 317 49 0 chr13 44701509 44701591 -75582721 - MLT1A LTR MaLR -288 86 1 5 926 241 206 0 0 chr13 44701607 44701659 -75582653 - MIRc SINE MIR -112 156 102 5 926 769 288 111 50 chr13 44701785 44702165 -75582147 - MLT1C LTR MaLR -53 414 12 5 926 297 338 0 48 chr13 44702340 44702424 -75581888 + ID4 SINE ID 1 80 -3 5 926 265 241 0 0 chr13 44702446 44702500 -75581812 + ID SINE ID 8 61 -163 5 926 320 264 0 0 chr13 44702760 44702832 -75581480 - ID4_ SINE ID -10 73 2 5 926 236 290 16 0 chr13 44702908 44702970 -75581342 + ID2 SINE ID 20 82 -1 5 926 231 250 51 26 chr13 44703193 44703271 -75581041 - ID4 SINE ID -1 82 3 5 926 252 233 0 77 chr13 44703811 44703876 -75580436 + MER46C DNA MER2_type 80 139 -199 5 926 231 184 0 0 chr13 44703960 44703998 -75580314 + MER46C DNA MER2_type 287 324 -14 5 926 342 0 0 0 chr13 44704030 44704068 -75580244 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 926 589 248 23 0 chr13 44704144 44704273 -75580039 - B1F1 SINE Alu -17 132 1 5 926 340 238 119 0 chr13 44704670 44704771 -75579541 + PB1D10 SINE Alu 5 117 0 5 926 572 316 0 0 chr13 44704782 44704940 -75579372 + RSINE1 SINE B4 2 159 -6 5 926 659 13 0 0 chr13 44705293 44705370 -75578942 + B1_Mur4 SINE Alu 61 137 -13 5 926 234 116 0 0 chr13 44705374 44705417 -75578895 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 926 599 103 47 101 chr13 44705891 44706020 -75578292 + B1F SINE Alu 6 127 -22 5 926 255 89 67 0 chr13 44706020 44706065 -75578247 + B1F SINE Alu 73 120 -29 5 926 346 267 31 7 chr13 44706046 44706144 -75578168 + B1F SINE Alu 48 144 -5 5 926 345 349 55 9 chr13 44706212 44706322 -75577990 + ID_B1 SINE B4 87 201 -23 5 926 557 220 0 17 chr13 44706332 44706452 -75577860 - PB1D9 SINE Alu -1 119 2 5 926 331 321 59 79 chr13 44706452 44706478 -75577834 + B1F1 SINE Alu 126 149 0 5 926 1446 49 60 11 chr13 44706939 44707124 -75577188 + B2_Mm2 SINE B2 1 194 -1 5 926 229 325 38 114 chr13 44707238 44707370 -75576942 - ID_B1 SINE B4 -74 150 29 5 926 240 150 250 0 chr13 44707324 44707384 -75576928 - BC1_Mm scRNA scRNA -77 75 1 5 926 446 254 17 34 chr13 44707699 44707817 -75576495 - ID_B1 SINE B4 -2 222 107 5 926 236 167 0 182 chr13 44708009 44708075 -75576237 - PB1D7 SINE Alu 0 120 67 5 926 212 231 169 0 chr13 44708461 44708526 -75575786 + B1F SINE Alu 3 78 -71 5 926 516 106 0 0 chr13 44708755 44708840 -75575472 + (TC)n Simple_repeat Simple_repeat 2 86 0 5 926 778 209 0 13 chr13 44709205 44709355 -75574957 - B1_Mur2 SINE Alu 0 149 2 5 926 629 279 68 29 chr13 44709355 44709562 -75574750 - B4A SINE B4 -63 229 15 5 926 1726 26 0 0 chr13 44710108 44710301 -75574011 - B2_Mm1t SINE B2 0 193 1 5 926 323 194 63 16 chr13 44710411 44710474 -75573838 - HAL1-3A_ME LINE L1 -818 2040 1975 5 926 449 157 35 0 chr13 44710487 44710602 -75573710 + (TG)n Simple_repeat Simple_repeat 2 120 0 5 926 531 267 110 0 chr13 44710607 44710753 -75573559 - RSINE1 SINE B4 -2 163 2 5 926 333 0 0 0 chr13 44710762 44710799 -75573513 + (T)n Simple_repeat Simple_repeat 1 37 0 5 926 1248 54 0 0 chr13 44710799 44710946 -75573366 - B1_Mus1 SINE Alu 0 148 2 5 926 472 252 57 114 chr13 44711733 44712033 -75572279 + MLT1A LTR MaLR 23 310 -55 5 926 232 152 0 0 chr13 44712018 44712061 -75572251 - BC1_Mm scRNA scRNA 0 83 41 5 926 359 220 235 8 chr13 44712083 44712202 -75572110 - B1_Mur3 SINE Alu -2 147 2 5 926 780 261 34 24 chr13 44712333 44712541 -75571771 - B3 SINE B2 -5 211 2 5 926 440 266 27 47 chr13 44712929 44713079 -75571233 - B1F SINE Alu -2 147 1 5 926 1044 54 7 13 chr13 44714337 44714487 -75569825 + (TTTC)n Simple_repeat Simple_repeat 4 152 0 5 926 309 258 8 104 chr13 44714636 44714770 -75569542 - MLT1B LTR MaLR -161 229 109 5 926 234 0 0 0 chr13 44714940 44714966 -75569346 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 926 1351 52 0 17 chr13 44714968 44715145 -75569167 - B2_Mm2 SINE B2 -21 174 1 5 926 379 230 186 90 chr13 44715179 44715303 -75569009 + B3 SINE B2 3 138 -78 5 926 270 0 0 0 chr13 44715303 44715333 -75568979 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 926 230 230 186 90 chr13 44715333 44715375 -75568937 + B2_Mm2 SINE B2 134 184 -11 5 926 762 207 87 43 chr13 44715381 44715535 -75568777 + B3 SINE B2 1 165 -51 5 926 237 98 0 0 chr13 44715535 44715576 -75568736 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 5 926 762 207 87 43 chr13 44715576 44715628 -75568684 + B3 SINE B2 166 215 -1 5 926 191 36 36 0 chr13 44715725 44715753 -75568559 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 926 718 221 21 7 chr13 44715753 44715894 -75568418 - B1_Mur1 SINE Alu 0 149 7 5 926 396 294 94 127 chr13 44716143 44716278 -75568034 - MLT1A0 LTR MaLR -38 327 207 5 926 1703 26 0 0 chr13 44716278 44716470 -75567842 + B2_Mm1a SINE B2 2 193 0 5 926 396 294 94 127 chr13 44716470 44716610 -75567702 - MLT1A0 LTR MaLR -159 206 61 5 926 394 290 75 119 chr13 44716638 44716803 -75567509 + MTE2a LTR MaLR 8 171 -208 5 926 2624 122 47 7 chr13 44716803 44717208 -75567104 - MTC LTR MaLR 0 421 1 5 926 394 290 75 119 chr13 44717208 44717269 -75567043 + MTE2a LTR MaLR 172 224 -155 5 926 1133 55 7 40 chr13 44717329 44717480 -75566832 - B1_Mus2 SINE Alu -1 146 1 5 926 688 262 28 23 chr13 44717592 44717768 -75566544 + MTE2a LTR MaLR 189 365 -14 5 926 242 208 19 0 chr13 44718543 44718596 -75565716 - MIRb SINE MIR -50 218 165 5 926 583 304 7 0 chr13 44718935 44719073 -75565239 + RSINE1 SINE B4 2 140 -25 5 926 444 37 0 0 chr13 44719073 44719127 -75565185 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 926 297 189 19 0 chr13 44719409 44719462 -75564850 + ID4 SINE ID 1 54 -29 5 926 320 111 0 18 chr13 44719495 44719550 -75564762 + (GGA)n Simple_repeat Simple_repeat 3 56 0 5 926 297 246 60 52 chr13 44719550 44719666 -75564646 + PB1D10 SINE Alu 1 117 0 5 926 747 299 68 44 chr13 44719884 44720178 -75564134 + MLT2B3 LTR ERVL 1 301 -253 5 926 397 321 77 34 chr13 44720186 44720483 -75563829 + MLT1I LTR MaLR 7 316 -95 5 926 250 241 0 0 chr13 44720498 44720552 -75563760 + tRNA-Ala-GCY_ tRNA tRNA 15 68 -7 5 926 253 331 59 43 chr13 44720661 44720700 -75563612 - B2_Mm2 SINE B2 0 195 10 5 926 627 271 49 0 chr13 44720700 44720844 -75563468 - RSINE1 SINE B4 -4 161 11 5 926 369 62 0 0 chr13 44720856 44720904 -75563408 + (TTTTC)n Simple_repeat Simple_repeat 3 50 0 5 926 311 158 35 0 chr13 44720967 44721024 -75563288 - HAL1-3A_ME LINE L1 -824 2034 1976 5 926 283 309 68 68 chr13 44721136 44721299 -75563013 - B4 SINE B4 -114 178 16 5 926 246 234 133 15 chr13 44721350 44721429 -75562883 - B1F SINE Alu -18 102 17 5 926 213 326 105 33 chr13 44722423 44722516 -75561796 + ID_B1 SINE B4 2 164 -60 5 926 240 220 34 0 chr13 44722516 44722575 -75561737 + PB1D10 SINE Alu 23 83 -34 5 926 1120 119 85 0 chr13 44722882 44723059 -75561253 + B2_Mm1a SINE B2 2 193 0 5 926 3458 3 0 0 chr13 44723059 44723437 -75560875 + L1Md_T LINE L1 6205 6582 0 5 926 625 273 50 31 chr13 44723685 44723844 -75560468 + RSINE1 SINE B4 3 164 -1 5 926 313 287 132 118 chr13 44723922 44724210 -75560102 + B4 SINE B4 1 292 0 5 926 613 195 25 33 chr13 44724280 44724402 -75559910 + B1_Mur2 SINE Alu 17 137 -12 5 926 387 148 0 0 chr13 44724404 44724492 -75559820 + (TC)n Simple_repeat Simple_repeat 1 88 0 5 926 410 236 141 39 chr13 44724509 44724637 -75559675 - B1F1 SINE Alu -8 141 1 5 926 215 163 23 0 chr13 44724780 44724823 -75559489 + T-rich Low_complexity Low_complexity 2 45 0 5 926 370 189 32 0 chr13 44725240 44725335 -75558977 + CT-rich Low_complexity Low_complexity 3 100 0 5 926 337 206 13 27 chr13 44725380 44725455 -75558857 - B1F1 SINE Alu -64 85 12 5 926 290 223 20 2 chr13 44725822 44725884 -75558428 - ID4 SINE ID -62 90 28 5 926 539 210 152 0 chr13 44725972 44726110 -75558202 - RSINE1 SINE B4 -2 163 5 5 926 402 221 83 46 chr13 44726125 44726234 -75558078 - PB1D10 SINE Alu 0 117 5 5 926 558 54 0 0 chr13 44726398 44726472 -75557840 + (TCC)n Simple_repeat Simple_repeat 1 74 0 5 926 614 290 88 44 chr13 44726511 44726785 -75557527 + MER74A LTR ERVL 32 317 -241 5 926 579 218 333 4 chr13 44726793 44727070 -75557242 - MTEa LTR MaLR -8 371 4 5 926 434 243 193 35 chr13 44727073 44727218 -75557094 + MER74A LTR ERVL 313 480 -78 5 926 709 220 52 0 chr13 44727349 44727522 -75556790 + L1MB2 LINE L1 5828 6009 -162 5 926 476 252 69 0 chr13 44727552 44727683 -75556629 - B1_Mus1 SINE Alu -7 141 2 5 926 246 32 0 0 chr13 44727691 44727722 -75556590 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 926 536 230 10 10 chr13 44727730 44727831 -75556481 - B1_Mur2 SINE Alu -48 101 1 6 926 243 287 35 69 chr13 44727835 44727951 -75556361 + L1MB2 LINE L1 6025 6136 -44 5 926 1140 59 0 0 chr13 44727957 44728092 -75556220 + B1_Mus2 SINE Alu 1 135 -12 6 926 681 13 0 0 chr13 44728092 44728170 -75556142 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 6 926 1430 64 26 11 chr13 44728190 44728380 -75555932 + B2_Mm2 SINE B2 1 193 -2 6 926 535 281 62 0 chr13 44728383 44728511 -75555801 + B1F1 SINE Alu 4 139 -10 6 926 435 19 0 0 chr13 44728810 44728862 -75555450 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 926 1044 194 47 117 chr13 44729168 44729442 -75554870 + ORR1C2 LTR MaLR 44 298 -86 6 926 663 297 66 76 chr13 44729449 44729646 -75554666 + ID_B1 SINE B4 3 197 -27 6 926 378 0 0 0 chr13 44729671 44729713 -75554599 + (CATA)n Simple_repeat Simple_repeat 2 43 0 6 926 205 161 0 0 chr13 44730215 44730246 -75554066 + A-rich Low_complexity Low_complexity 3 33 0 6 926 320 94 19 0 chr13 44730872 44730925 -75553387 + (TCCCC)n Simple_repeat Simple_repeat 1 54 0 6 926 1265 113 11 0 chr13 44731945 44732122 -75552190 + B2_Mm1t SINE B2 1 179 -14 6 926 331 127 0 18 chr13 44732154 44732210 -75552102 + B2_Mm2 SINE B2 47 101 -94 6 926 489 249 132 12 chr13 44732265 44732432 -75551880 + B3 SINE B2 27 213 -3 6 926 295 292 77 52 chr13 44733270 44733425 -75550887 + RSINE1 SINE B4 3 161 -4 6 926 468 35 0 0 chr13 44733428 44733486 -75550826 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 926 376 231 0 88 chr13 44733651 44733765 -75550547 - B3A SINE B2 -94 104 1 6 926 279 320 39 0 chr13 44734199 44734277 -75550035 + PB1D9 SINE Alu 2 82 -38 6 926 488 306 0 22 chr13 44734207 44734344 -75549968 + ID_B1 SINE B4 91 224 0 6 926 185 119 0 23 chr13 44734344 44734387 -75549925 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 6 926 848 234 39 29 chr13 44734582 44734789 -75549523 + B3 SINE B2 2 210 -6 6 926 357 270 42 63 chr13 44735156 44735251 -75549061 + B1_Mur2 SINE Alu 1 93 -56 6 926 907 118 44 0 chr13 44735351 44735487 -75548825 - B2_Mm2 SINE B2 -52 143 2 6 926 246 62 0 0 chr13 44735931 44735963 -75548349 + (CCTG)n Simple_repeat Simple_repeat 4 35 0 6 926 512 255 105 43 chr13 44735983 44736192 -75548120 - ID_B1 SINE B4 -1 223 2 6 926 304 231 31 0 chr13 44736233 44736298 -75548014 - ID4_ SINE ID -12 71 5 6 926 940 47 0 16 chr13 44736361 44736490 -75547822 - L1_Mus1 LINE L1 0 6567 6441 6 926 4249 59 8 2 chr13 44736490 44737018 -75547294 - L1_Mus1 LINE L1 -233 6334 5804 6 926 369 291 62 38 chr13 44737018 44737155 -75547157 - B1F1 SINE Alu -12 137 1 6 926 357 307 0 50 chr13 44737903 44738023 -75546289 + PB1D7 SINE Alu 6 119 -1 6 926 399 227 0 111 chr13 44738053 44738152 -75546160 + RSINE1 SINE B4 78 165 0 6 926 1580 202 46 27 chr13 44738319 44738340 -75545972 + ORR1D1 LTR MaLR 1 21 -353 6 926 288 0 0 0 chr13 44738340 44738372 -75545940 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 926 1580 202 46 27 chr13 44738372 44738716 -75545596 + ORR1D1 LTR MaLR 22 372 -2 6 926 486 0 0 0 chr13 44738800 44738854 -75545458 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 6 926 209 286 178 79 chr13 44739101 44739253 -75545059 - L2b LINE L2 0 3375 3209 6 926 21 71 0 0 chr13 44739319 44739361 -75544951 + AT_rich Low_complexity Low_complexity 1 42 0 6 926 288 52 33 33 chr13 44739466 44739526 -75544786 + (TTG)n Simple_repeat Simple_repeat 1 60 0 6 926 1240 48 0 0 chr13 44739540 44739687 -75544625 + B1_Mus2 SINE Alu 1 147 0 6 926 724 310 50 0 chr13 44739706 44739906 -75544406 - ID_B1 SINE B4 -12 212 3 6 926 388 306 8 61 chr13 44739911 44739929 -75544383 - ID_B1 SINE B4 0 224 213 6 926 215 31 0 30 chr13 44739929 44739962 -75544350 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 6 926 388 306 8 61 chr13 44739962 44740075 -75544237 - ID_B1 SINE B4 -12 212 100 6 926 26 0 0 0 chr13 44740104 44740130 -75544182 + AT_rich Low_complexity Low_complexity 1 26 0 6 926 368 284 18 9 chr13 44740130 44740240 -75544072 + PB1D10 SINE Alu 7 117 0 6 926 483 288 83 8 chr13 44740242 44740375 -75543937 + ID_B1 SINE B4 77 219 -5 6 926 591 253 40 13 chr13 44740409 44740561 -75543751 - RSINE1 SINE B4 -7 158 3 6 926 425 223 0 21 chr13 44740576 44740672 -75543640 - L1MA5 LINE L1 -12 6288 6195 6 926 210 71 0 0 chr13 44740904 44740932 -75543380 + (AGGGGG)n Simple_repeat Simple_repeat 1 28 0 6 926 1263 178 131 65 chr13 44741363 44741616 -75542696 - ORR1B1 LTR MaLR -35 359 74 6 926 983 125 119 0 chr13 44741616 44741776 -75542536 - B2_Mm2 SINE B2 -14 181 3 6 926 1263 178 131 65 chr13 44741776 44741859 -75542453 - ORR1B1 LTR MaLR -321 73 2 6 926 953 224 11 16 chr13 44742164 44742350 -75541962 + ID_B1 SINE B4 6 190 -34 6 926 297 0 0 0 chr13 44742370 44742403 -75541909 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 926 212 54 54 0 chr13 44742421 44742458 -75541854 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 6 926 374 245 113 17 chr13 44742523 44742626 -75541686 + B3A SINE B2 65 173 -22 6 926 373 273 0 22 chr13 44742659 44742749 -75541563 + ID_B1 SINE B4 121 208 -16 6 926 264 248 95 41 chr13 44742694 44742841 -75541471 - RMER17D LTR ERVK -353 536 382 6 926 436 223 52 50 chr13 44742843 44742963 -75541349 + PB1D7 SINE Alu 2 148 -1 6 926 279 79 0 0 chr13 44742963 44743001 -75541311 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 926 22 0 0 0 chr13 44743540 44743562 -75540750 + AT_rich Low_complexity Low_complexity 1 22 0 6 926 290 209 65 0 chr13 44743581 44743660 -75540652 + PB1D10 SINE Alu 10 100 -20 6 926 1111 107 11 0 chr13 44743683 44743861 -75540451 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 6 926 629 164 35 17 chr13 44743865 44744039 -75540273 + GA-rich Low_complexity Low_complexity 1 177 0 6 926 216 0 0 0 chr13 44744122 44744146 -75540166 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 926 224 253 12 74 chr13 44744693 44744774 -75539538 + MIR SINE MIR 55 130 -78 6 926 608 286 24 18 chr13 44744778 44744942 -75539370 + ID_B1 SINE B4 40 204 -20 6 926 612 87 9 28 chr13 44744964 44745071 -75539241 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 6 926 721 213 174 5 chr13 44745084 44745268 -75539044 + B3 SINE B2 2 216 0 6 926 25 51 0 0 chr13 44745272 44745311 -75539001 + AT_rich Low_complexity Low_complexity 1 39 0 6 926 897 97 0 0 chr13 44745801 44746041 -75538271 + (TC)n Simple_repeat Simple_repeat 1 240 0 6 926 200 231 0 37 chr13 44746183 44746237 -75538075 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 926 383 169 0 0 chr13 44746452 44746511 -75537801 + RSINE1 SINE B4 53 111 -54 6 926 500 260 53 65 chr13 44746545 44746708 -75537604 + ID_B1 SINE B4 69 223 -69 6 926 333 0 0 0 chr13 44746981 44747018 -75537294 + (A)n Simple_repeat Simple_repeat 1 37 0 6 926 231 88 0 0 chr13 44747257 44747291 -75537021 + (CAA)n Simple_repeat Simple_repeat 3 36 0 6 926 320 200 149 35 chr13 44747559 44747673 -75536639 - L1MA6 LINE L1 -5 6295 6169 6 926 795 124 8 30 chr13 44747762 44747895 -75536417 + B1_Mus1 SINE Alu 7 136 -12 6 926 198 0 0 0 chr13 44747896 44747918 -75536394 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 926 940 94 8 0 chr13 44747918 44748046 -75536266 + B2_Mm2 SINE B2 2 130 -65 6 926 718 265 101 39 chr13 44748392 44748786 -75535526 + Lx9 LINE L1 5756 6190 -1283 6 926 996 113 0 0 chr13 44748786 44749053 -75535259 + (TAGA)n Simple_repeat Simple_repeat 1 267 0 6 926 424 292 142 64 chr13 44749053 44749157 -75535155 + Lx9 LINE L1 6191 6295 -1178 6 926 616 256 219 13 chr13 44749150 44749451 -75534861 + Lx9 LINE L1 6828 7190 -283 6 926 257 371 11 0 chr13 44749870 44749959 -75534353 + Charlie23a DNA MER1_type 249 338 -1 6 926 207 0 0 0 chr13 44750015 44750038 -75534274 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 926 432 0 0 0 chr13 44750038 44750085 -75534227 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 926 349 210 0 0 chr13 44750086 44750148 -75534164 - RSINE1 SINE B4 -95 70 9 6 926 408 319 72 7 chr13 44750386 44750525 -75533787 + B1F SINE Alu 1 148 -1 6 926 528 286 12 69 chr13 44750532 44750705 -75533607 + RSINE1 SINE B4 3 165 0 6 926 252 0 0 0 chr13 44750757 44750785 -75533527 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 6 926 1040 80 0 7 chr13 44750790 44750929 -75533383 - B1_Mus2 SINE Alu -8 139 2 6 926 1316 104 22 5 chr13 44750977 44751161 -75533151 + B2_Mm2 SINE B2 1 187 -8 6 926 962 234 45 0 chr13 44751196 44751397 -75532915 - B3 SINE B2 -5 211 2 6 926 213 175 0 0 chr13 44751691 44751731 -75532581 + G-rich Low_complexity Low_complexity 2 41 0 6 926 1434 72 5 45 chr13 44751785 44751987 -75532325 - B2_Mm2 SINE B2 0 195 2 6 926 1284 20 7 0 chr13 44752013 44752159 -75532153 - B1_Mm SINE Alu 0 147 1 6 926 21 0 0 0 chr13 44752179 44752200 -75532112 + AT_rich Low_complexity Low_complexity 1 21 0 6 926 460 230 53 53 chr13 44752200 44752245 -75532067 - B1_Mur4 SINE Alu -7 143 106 6 926 207 0 0 0 chr13 44752245 44752268 -75532044 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 6 926 499 194 43 1 chr13 44752268 44752363 -75531949 - PB1D9 SINE Alu -45 105 2 6 926 324 48 0 0 chr13 44752404 44752446 -75531866 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 926 261 270 0 39 chr13 44752452 44752529 -75531783 + RSINE1 SINE B4 50 123 -42 6 926 252 0 0 0 chr13 44752530 44752558 -75531754 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 926 632 169 136 15 chr13 44752635 44752767 -75531545 + B1_Mur2 SINE Alu 2 149 0 6 926 198 71 0 0 chr13 44752806 44752834 -75531478 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 926 265 291 33 55 chr13 44752904 44752995 -75531317 + MIRc SINE MIR 104 192 -76 6 926 351 44 0 0 chr13 44753322 44753367 -75530945 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 926 214 156 21 43 chr13 44753910 44753957 -75530355 + C-rich Low_complexity Low_complexity 5 50 0 7 926 447 363 39 57 chr13 44753959 44754292 -75530020 + ORR1E LTR MaLR 33 359 0 7 926 491 43 0 14 chr13 44754449 44754520 -75529792 + (TC)n Simple_repeat Simple_repeat 1 70 0 7 926 271 319 0 0 chr13 44754523 44754595 -75529717 - ID4 SINE ID -9 74 3 7 926 304 295 105 18 chr13 44754608 44754722 -75529590 - PB1 SINE Alu -2 125 2 7 926 1256 41 0 0 chr13 44756149 44756294 -75528018 - B1_Mus1 SINE Alu -2 146 2 7 926 823 182 201 17 chr13 44756459 44756638 -75527674 + B3 SINE B2 1 212 -4 7 926 1018 144 192 6 chr13 44756856 44757038 -75527274 - B3 SINE B2 0 216 1 7 926 366 262 0 71 chr13 44757038 44757150 -75527162 - PB1D7 SINE Alu -1 119 15 7 926 492 271 35 7 chr13 44757176 44757317 -75526995 - ID_B1 SINE B4 -8 216 72 7 926 1187 135 115 0 chr13 44757321 44757503 -75526809 - URR1B DNA MER1_type -1 224 41 7 926 210 71 0 0 chr13 44757503 44757531 -75526781 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 926 1187 135 115 0 chr13 44757531 44757548 -75526764 - URR1B DNA MER1_type -185 40 3 7 926 643 58 0 0 chr13 44757659 44757745 -75526567 + L1Md_A LINE L1 6497 6582 0 7 926 446 257 88 0 chr13 44757767 44757880 -75526432 + ID_B1 SINE B4 99 221 -3 7 926 500 239 8 33 chr13 44757887 44758008 -75526304 + PB1D9 SINE Alu 3 120 0 7 926 593 293 83 105 chr13 44758138 44758451 -75525861 + ORR1E LTR MaLR 54 359 0 7 926 333 395 0 0 chr13 44759864 44759993 -75524319 + B1F SINE Alu 21 149 0 7 926 441 316 50 31 chr13 44759996 44760156 -75524156 + RSINE1 SINE B4 3 165 0 7 926 485 222 98 49 chr13 44760178 44760301 -75524011 - B1_Mus1 SINE Alu -10 138 10 7 926 24 32 0 0 chr13 44760317 44760348 -75523964 + AT_rich Low_complexity Low_complexity 1 31 0 7 926 359 300 12 0 chr13 44760365 44760445 -75523867 + B1F1 SINE Alu 50 130 -19 7 926 204 196 0 35 chr13 44760576 44760634 -75523678 + (TAAA)n Simple_repeat Simple_repeat 1 56 0 7 926 1200 48 0 7 chr13 44760779 44760926 -75523386 + B1_Mm SINE Alu 1 146 -1 7 926 186 71 0 0 chr13 44760927 44760955 -75523357 + (A)n Simple_repeat Simple_repeat 1 28 0 7 926 208 59 101 14 chr13 44760991 44761060 -75523252 + (TA)n Simple_repeat Simple_repeat 2 76 0 7 926 495 283 7 104 chr13 44761064 44761218 -75523094 - ID_B1 SINE B4 -16 208 70 7 926 217 89 44 0 chr13 44761306 44761351 -75522961 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 926 370 48 63 0 chr13 44761354 44761417 -75522895 + (CAGA)n Simple_repeat Simple_repeat 2 68 0 7 926 300 241 74 49 chr13 44761503 44761625 -75522687 + MamGypLTR1b LTR Gypsy 647 771 -11 7 926 450 248 51 34 chr13 44762064 44762181 -75522131 - PB1 SINE Alu -4 123 5 7 926 1086 202 9 23 chr13 44762471 44762689 -75521623 + B3 SINE B2 2 216 0 7 926 517 289 32 37 chr13 44762783 44762970 -75521342 + ID_B1 SINE B4 1 186 -38 7 926 886 278 10 0 chr13 44763016 44763225 -75521087 + MTD LTR MaLR 1 211 -208 7 926 476 198 52 0 chr13 44763269 44763365 -75520947 + B3 SINE B2 116 216 0 7 926 331 182 0 0 chr13 44763391 44763446 -75520866 + MTD LTR MaLR 193 247 -172 7 926 246 128 0 0 chr13 44763446 44763485 -75520827 + (T)n Simple_repeat Simple_repeat 1 39 0 7 926 986 62 0 153 chr13 44763485 44763655 -75520657 - B1_Mus1 SINE Alu 0 148 5 7 926 774 204 39 84 chr13 44763648 44763851 -75520461 + MTD LTR MaLR 226 419 0 7 926 217 226 68 45 chr13 44763985 44764073 -75520239 - PB1D10 SINE Alu 0 117 28 7 926 1237 35 0 0 chr13 44764405 44764550 -75519762 + B1_Mm SINE Alu 2 146 -1 7 926 249 365 0 46 chr13 44765705 44765814 -75518498 + MER5A1 DNA MER1_type 1 104 -62 7 926 256 191 0 0 chr13 44765914 44765961 -75518351 - MLT2B1 LTR ERVL -1 566 520 7 926 477 281 8 45 chr13 44765980 44766114 -75518198 + RSINE1 SINE B4 2 130 -35 7 926 414 234 125 0 chr13 44766152 44766254 -75518058 + B3 SINE B2 2 117 -81 7 926 346 177 67 38 chr13 44766287 44766379 -75517933 + ID4_ SINE ID 2 99 -53 7 926 1023 128 7 0 chr13 44766379 44766527 -75517785 + B1_Mur4 SINE Alu 2 150 0 7 926 278 208 129 86 chr13 44766527 44766550 -75517762 + BC1_Mm scRNA scRNA 100 122 -30 7 926 307 243 157 61 chr13 44766532 44766712 -75517600 + MT2B LTR ERVL 49 241 -343 7 926 555 306 12 18 chr13 44766628 44766799 -75517513 + ID_B1 SINE B4 81 255 -37 7 926 186 43 0 0 chr13 44767106 44767129 -75517183 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 7 926 1135 69 7 0 chr13 44767129 44767274 -75517038 - B1_Mus1 SINE Alu -2 146 1 7 926 414 0 0 0 chr13 44767284 44767330 -75516982 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 926 1065 50 0 60 chr13 44767331 44767480 -75516832 - B1_Mus2 SINE Alu -6 141 2 7 926 225 0 0 0 chr13 44767490 44767515 -75516797 + (T)n Simple_repeat Simple_repeat 1 25 0 7 926 771 192 0 0 chr13 44767819 44767965 -75516347 + B3 SINE B2 66 211 -5 7 926 440 275 0 8 chr13 44767997 44768118 -75516194 + PB1D9 SINE Alu 1 120 0 7 926 285 98 0 0 chr13 44768122 44768163 -75516149 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 7 926 333 0 0 0 chr13 44768173 44768210 -75516102 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 926 396 0 0 0 chr13 44768210 44768253 -75516059 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 926 390 259 12 12 chr13 44768641 44768727 -75515585 + Charlie24 DNA MER1_type 2350 2435 -15 7 926 576 223 29 7 chr13 44769334 44769474 -75514838 - B1F SINE Alu -4 145 3 7 926 630 236 27 13 chr13 44769537 44769687 -75514625 + RSINE1 SINE B4 14 165 0 7 926 575 291 98 26 chr13 44769744 44769938 -75514374 + MTEa LTR MaLR 13 220 -159 7 926 230 234 0 9 chr13 44769938 44770046 -75514266 + CT-rich Low_complexity Low_complexity 1 107 0 7 926 313 317 66 40 chr13 44770051 44770202 -75514110 + MTEa LTR MaLR 201 355 -24 7 926 801 160 0 0 chr13 44770207 44770351 -75513961 + GA-rich Low_complexity Low_complexity 1 144 0 7 926 274 315 73 56 chr13 44770355 44770587 -75513725 + B4A SINE B4 1 236 -56 7 926 532 215 24 47 chr13 44770622 44770749 -75513563 - RSINE1 SINE B4 -41 124 1 7 926 798 247 4 68 chr13 44770751 44770986 -75513326 - ID_B1 SINE B4 -4 220 1 7 926 965 96 226 19 chr13 44771259 44771418 -75512894 + B2_Mm2 SINE B2 2 193 -2 7 926 513 264 30 30 chr13 44772154 44772287 -75512025 - B1_Mur2 SINE Alu -16 133 1 7 926 292 321 0 35 chr13 44772567 44772654 -75511658 - B1F SINE Alu -63 86 3 7 926 1011 75 19 52 chr13 44772723 44772877 -75511435 - B2_Mm2 SINE B2 -14 181 33 7 926 267 79 0 0 chr13 44772939 44772977 -75511335 + (GA)n Simple_repeat Simple_repeat 2 39 0 7 926 270 0 0 0 chr13 44772979 44773009 -75511303 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 926 567 270 106 6 chr13 44773190 44773369 -75510943 - B3A SINE B2 0 198 2 7 926 436 200 0 0 chr13 44773429 44773504 -75510808 - B1_Mur2 SINE Alu -12 137 63 7 926 1130 195 59 45 chr13 44773509 44773861 -75510451 + RMER16 LTR ERVK 1 533 0 7 926 473 279 90 36 chr13 44773861 44774009 -75510303 - B4A SINE B4 -135 157 1 7 926 632 204 81 69 chr13 44774126 44774300 -75510012 - B3 SINE B2 -37 179 4 7 926 1202 68 0 0 chr13 44774313 44774460 -75509852 - B1_Mus1 SINE Alu 0 148 2 7 926 27 29 0 0 chr13 44774476 44774510 -75509802 + AT_rich Low_complexity Low_complexity 1 34 0 7 926 2710 102 64 34 chr13 44774519 44774987 -75509325 - RLTR45 LTR ERVK 0 482 1 7 926 217 290 0 0 chr13 44774991 44775053 -75509259 + CT-rich Low_complexity Low_complexity 2 63 0 7 926 1284 34 0 0 chr13 44775122 44775269 -75509043 + B1_Mus2 SINE Alu 1 147 0 7 926 253 279 52 41 chr13 44775290 44775387 -75508925 + MurSatRep1 Unknown Unknown 218 315 -1822 7 926 332 246 188 53 chr13 44775403 44775536 -75508776 - RSINE1 SINE B4 -2 163 13 7 926 192 111 18 36 chr13 44776027 44776083 -75508229 + C-rich Low_complexity Low_complexity 3 57 0 7 926 545 308 25 60 chr13 44776239 44776474 -75507838 + LTR33A_ LTR ERVL 50 276 -255 7 926 261 270 0 112 chr13 44776462 44776587 -75507725 - LTR33A LTR ERVL -403 117 7 7 926 311 287 110 39 chr13 44776869 44776996 -75507316 - B1F SINE Alu -2 147 12 7 926 548 246 0 17 chr13 44777387 44777507 -75506805 - RSINE1 SINE B4 -45 120 3 7 926 313 300 0 52 chr13 44777505 44777621 -75506691 - PB1D9 SINE Alu 0 120 11 7 926 216 0 0 0 chr13 44777669 44777693 -75506619 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 926 498 160 143 54 chr13 44777937 44778049 -75506263 + B1_Mur3 SINE Alu 28 149 0 7 926 414 0 0 0 chr13 44778458 44778504 -75505808 + (TTCC)n Simple_repeat Simple_repeat 4 49 0 7 926 569 176 19 10 chr13 44778562 44778665 -75505647 + B1_Mus2 SINE Alu 36 139 -8 7 926 533 15 15 0 chr13 44778686 44778752 -75505560 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 7 926 198 103 0 0 chr13 44778855 44778884 -75505428 + (GGA)n Simple_repeat Simple_repeat 2 30 0 7 926 475 218 0 11 chr13 44779522 44779610 -75504702 + RSINE1 SINE B4 11 97 -68 7 926 221 358 37 75 chr13 44779610 44779629 -75504683 + B2_Mm2 SINE B2 10 106 -89 7 926 883 146 194 31 chr13 44779629 44779820 -75504492 + URR1A DNA MER1_type 5 226 0 7 926 221 358 37 75 chr13 44779820 44779897 -75504415 + B2_Mm2 SINE B2 107 187 -8 7 926 474 293 132 103 chr13 44779912 44780125 -75504187 + ID_B1 SINE B4 6 224 0 7 926 494 265 0 17 chr13 44780007 44780126 -75504186 + PB1D7 SINE Alu 3 119 -1 7 926 503 316 0 7 chr13 44780141 44780281 -75504031 + ID_B1 SINE B4 81 219 -5 8 926 1164 75 7 0 chr13 44780290 44780436 -75503876 + B1_Mus2 SINE Alu 1 147 0 8 926 291 114 0 0 chr13 44780438 44780482 -75503830 + (A)n Simple_repeat Simple_repeat 1 44 0 8 926 906 262 33 0 chr13 44780646 44780856 -75503456 + ID_B1 SINE B4 4 220 -4 8 926 212 31 62 0 chr13 44781039 44781071 -75503241 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 8 926 247 264 154 0 chr13 44781474 44781565 -75502747 + PB1D10 SINE Alu 5 109 -8 8 926 669 137 8 15 chr13 44781566 44781699 -75502613 + GA-rich Low_complexity Low_complexity 2 133 0 8 926 491 226 110 22 chr13 44781722 44781858 -75502454 + B1_Mur1 SINE Alu 2 149 0 8 926 354 239 103 15 chr13 44781896 44782032 -75502280 - L1MB3 LINE L1 -75 6108 5961 8 926 527 184 65 0 chr13 44782048 44782161 -75502151 - B1_Mur1 SINE Alu -7 142 3 8 926 450 0 0 0 chr13 44782163 44782213 -75502099 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 926 281 271 78 68 chr13 44782213 44782316 -75501996 - PB1D10 SINE Alu -13 104 1 8 926 1368 60 33 0 chr13 44782426 44782609 -75501703 + B2_Mm1t SINE B2 1 189 -4 8 926 228 35 0 0 chr13 44782644 44782673 -75501639 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8 926 536 216 129 0 chr13 44782676 44782792 -75501520 - ID_B1 SINE B4 -62 162 32 8 926 484 257 0 98 chr13 44782869 44783033 -75501279 - ID_B1 SINE B4 0 224 77 8 926 265 204 19 0 chr13 44783170 44783224 -75501088 - L1MB3 LINE L1 -437 5743 5689 8 926 766 163 54 54 chr13 44783574 44783723 -75500589 - B1_Mur2 SINE Alu 0 149 1 8 926 278 273 13 13 chr13 44783841 44783919 -75500393 - ID4_ SINE ID -5 78 1 8 926 402 21 0 0 chr13 44784418 44784465 -75499847 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 926 567 250 52 19 chr13 44784603 44784758 -75499554 - RSINE1 SINE B4 -4 161 2 8 926 852 123 6 19 chr13 44784769 44784926 -75499386 + (TTTC)n Simple_repeat Simple_repeat 1 155 0 8 926 799 157 0 36 chr13 44784927 44785066 -75499246 - B1_Mur1 SINE Alu -15 134 1 8 926 537 252 0 62 chr13 44785073 44785217 -75499095 - ID_B1 SINE B4 -5 219 85 8 926 447 225 30 228 chr13 44785361 44785443 -75498869 + B1_Mur1 SINE Alu 1 64 -85 8 926 1125 61 0 33 chr13 44785443 44785595 -75498717 - B1_Mus1 SINE Alu 0 148 2 8 926 447 225 30 228 chr13 44785595 44785679 -75498633 + B1_Mur1 SINE Alu 65 134 -15 8 926 414 0 0 0 chr13 44785680 44785726 -75498586 + (GGA)n Simple_repeat Simple_repeat 1 46 0 8 926 610 266 0 15 chr13 44785981 44786111 -75498201 - B1F SINE Alu -2 147 20 8 926 355 250 19 103 chr13 44786150 44786257 -75498055 - PB1D7 SINE Alu -11 109 12 8 926 309 309 25 2 chr13 44786946 44787053 -75497259 + 7SLRNA srpRNA srpRNA 2 111 -16 8 926 1921 160 27 72 chr13 44787147 44787200 -75497112 - ORR1B1 LTR MaLR -8 386 349 8 926 207 0 0 0 chr13 44787210 44787233 -75497079 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 8 926 1166 55 0 14 chr13 44787233 44787369 -75496943 - B1_Mus1 SINE Alu -11 137 2 8 926 1921 160 27 72 chr13 44787369 44787719 -75496593 - ORR1B1 LTR MaLR -46 348 1 8 926 390 235 14 45 chr13 44788293 44788436 -75495876 - B4A SINE B4 -157 135 1 8 926 245 171 104 91 chr13 44788855 44788932 -75495380 - Lx5 LINE L1 0 7050 6973 8 926 2488 193 30 0 chr13 44788914 44789344 -75494968 - Lx5 LINE L1 -370 6680 6238 8 926 250 259 52 134 chr13 44789344 44789478 -75494834 - ZP3AR Satellite Satellite -53 159 37 8 926 234 0 0 0 chr13 44789502 44789528 -75494784 + (A)n Simple_repeat Simple_repeat 1 26 0 8 926 555 315 18 6 chr13 44789910 44790073 -75494239 + ID_B1 SINE B4 5 169 -55 8 926 395 264 56 9 chr13 44789990 44790097 -75494215 + PB1D10 SINE Alu 6 117 0 8 926 257 262 15 15 chr13 44790627 44790693 -75493619 + PB1D10 SINE Alu 50 115 -2 8 926 348 298 83 28 chr13 44790708 44790877 -75493435 + B3A SINE B2 8 201 -15 8 926 794 176 35 0 chr13 44790899 44791041 -75493271 - B1_Mur2 SINE Alu 0 149 3 8 926 509 249 52 28 chr13 44791077 44791268 -75493044 + B3A SINE B2 1 195 0 8 926 272 196 0 0 chr13 44791305 44791351 -75492961 + B1F SINE Alu 20 65 -84 8 926 1181 48 0 40 chr13 44791354 44791506 -75492806 + B1_Mm SINE Alu 2 147 0 8 926 212 189 0 0 chr13 44791861 44791898 -75492414 + CT-rich Low_complexity Low_complexity 1 37 0 8 926 413 304 78 49 chr13 44792368 44792572 -75491740 - B3 SINE B2 -6 210 1 8 926 265 241 136 11 chr13 44792604 44792692 -75491620 - B3 SINE B2 0 216 118 8 926 414 253 49 28 chr13 44792691 44792865 -75491447 - B3A SINE B2 0 216 38 8 926 753 240 110 94 chr13 44792873 44793191 -75491121 - ORR1D2 LTR MaLR -13 357 35 8 926 213 24 71 24 chr13 44793340 44793382 -75490930 + (CACCC)n Simple_repeat Simple_repeat 3 46 0 8 926 453 161 72 51 chr13 44793600 44793723 -75490589 - B1_Mur1 SINE Alu 0 149 5 8 926 320 310 14 0 chr13 44794282 44794353 -75489959 + B3A SINE B2 2 73 -125 8 926 664 167 86 50 chr13 44794357 44794496 -75489816 - B1_Mur4 SINE Alu -6 144 1 8 926 297 259 169 56 chr13 44794914 44795127 -75489185 + LTR73 LTR ERV1 189 425 -147 8 926 419 270 20 12 chr13 44795174 44795282 -75489030 - PB1D10 SINE Alu -6 111 6 8 926 486 210 93 39 chr13 44795391 44795520 -75488792 - ID_B1 SINE B4 -84 140 5 8 926 750 276 24 9 chr13 44796166 44796379 -75487933 - B3A SINE B2 -1 215 2 8 926 238 264 0 0 chr13 44796379 44796417 -75487895 - PB1D7 SINE Alu -81 39 2 8 926 227 366 108 12 chr13 44796417 44796583 -75487729 + MIRb SINE MIR 84 265 -3 8 926 819 38 9 0 chr13 44796629 44796735 -75487577 - B1_Mm SINE Alu 0 147 41 8 926 291 228 20 61 chr13 44796650 44796748 -75487564 - RLTR25B LTR ERVK -507 521 428 8 926 783 207 0 7 chr13 44796759 44796905 -75487407 - B1_Mur2 SINE Alu 0 149 5 8 926 25 0 0 0 chr13 44797349 44797374 -75486938 + AT_rich Low_complexity Low_complexity 1 25 0 8 926 390 263 42 42 chr13 44797589 44797708 -75486604 - PB1D7 SINE Alu -1 119 1 8 926 1165 56 14 0 chr13 44797763 44797907 -75486405 + B1_Mus2 SINE Alu 1 146 -1 8 926 226 75 54 54 chr13 44797908 44797964 -75486348 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 8 926 777 259 6 0 chr13 44798007 44798173 -75486139 + B3 SINE B2 2 168 -48 8 926 396 0 0 0 chr13 44798181 44798225 -75486087 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 926 1108 35 13 40 chr13 44798313 44798463 -75485849 - B1_Mm SINE Alu 0 147 2 8 926 219 36 0 0 chr13 44798464 44798492 -75485820 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 926 286 317 87 19 chr13 44798505 44798608 -75485704 - PB1D10 SINE Alu -2 115 6 8 926 291 28 0 0 chr13 44798647 44798683 -75485629 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 926 259 242 141 40 chr13 44798684 44798783 -75485529 - B3A SINE B2 -60 138 30 8 926 216 372 27 27 chr13 44798802 44798951 -75485361 - B1F1 SINE Alu 0 149 1 8 926 659 156 56 7 chr13 44799821 44799963 -75484349 - RMER17C LTR ERVK -251 159 11 8 926 297 77 19 19 chr13 44800145 44800198 -75484114 + Lx4B LINE L1 7000 7052 -6 8 926 1426 64 11 16 chr13 44800301 44800491 -75483821 + B2_Mm1t SINE B2 2 190 -3 8 926 261 292 19 106 chr13 44801617 44801668 -75482644 + MT2B LTR ERVL 118 154 -447 8 926 496 250 32 16 chr13 44801668 44801794 -75482518 + B1_Mur2 SINE Alu 3 130 -19 8 926 22 0 0 0 chr13 44801956 44801978 -75482334 + AT_rich Low_complexity Low_complexity 1 22 0 8 926 399 213 26 69 chr13 44801998 44802114 -75482198 + PB1D9 SINE Alu 2 112 -8 8 926 372 22 0 0 chr13 44802140 44802185 -75482127 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 926 231 240 86 74 chr13 44802249 44802330 -75481982 - MLT1H LTR MaLR -13 536 455 8 926 342 356 75 5 chr13 44802493 44802678 -75481634 - MLT1G3 LTR MaLR -361 234 36 8 926 308 351 27 9 chr13 44802939 44803051 -75481261 + PB1D10 SINE Alu 3 116 -1 8 926 236 220 207 126 chr13 44803064 44803199 -75481113 + ID_B1 SINE B4 11 156 -68 8 926 1194 61 0 0 chr13 44803199 44803346 -75480966 + B1_Mm SINE Alu 1 147 0 8 926 442 190 0 0 chr13 44803377 44803456 -75480856 + ID_B1 SINE B4 145 223 -1 8 926 239 282 42 0 chr13 44803466 44803537 -75480775 + ID SINE ID 2 75 -149 8 926 474 18 0 0 chr13 44803546 44803601 -75480711 + (GAAA)n Simple_repeat Simple_repeat 4 58 0 8 926 212 200 0 0 chr13 44804183 44804223 -75480089 - RSINE1 SINE B4 -124 41 2 8 926 1281 20 0 0 chr13 44804252 44804398 -75479914 + B1_Mus2 SINE Alu 2 147 0 8 926 189 0 0 0 chr13 44804481 44804502 -75479810 + (T)n Simple_repeat Simple_repeat 1 21 0 8 926 597 28 0 0 chr13 44804861 44804932 -75479380 + (TCCC)n Simple_repeat Simple_repeat 2 72 0 8 926 274 270 21 82 chr13 44805245 44805342 -75478970 + PB1 SINE Alu 11 101 -26 8 926 237 286 0 144 chr13 44805468 44805558 -75478754 - ID4_ SINE ID -3 80 4 8 926 836 181 7 13 chr13 44805567 44805716 -75478596 - B1_Mur1 SINE Alu 0 149 12 8 926 288 256 143 24 chr13 44805768 44805852 -75478460 - B1F1 SINE Alu -3 146 53 8 926 328 233 138 43 chr13 44805977 44806071 -75478241 - RSINE1 SINE B4 -60 105 3 8 926 438 311 14 29 chr13 44806080 44806219 -75478093 - B1F SINE Alu 0 149 13 8 926 510 103 0 0 chr13 44806228 44806306 -75478006 + (CA)n Simple_repeat Simple_repeat 1 78 0 8 926 392 346 31 67 chr13 44806306 44806380 -75477932 - ID_B1 SINE B4 -134 90 10 9 926 225 154 0 0 chr13 44806907 44806946 -75477366 + CT-rich Low_complexity Low_complexity 2 40 0 9 926 383 252 56 0 chr13 44806963 44807070 -75477242 - PB1D9 SINE Alu -7 113 1 9 926 316 277 10 21 chr13 44807471 44807567 -75476745 + G-rich Low_complexity Low_complexity 3 97 0 9 926 255 125 0 0 chr13 44807835 44807875 -75476437 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 9 926 3665 10 0 0 chr13 44807990 44808386 -75475926 - MTA_Mm LTR MaLR 0 396 1 9 926 9522 25 2 1 chr13 44808386 44809483 -75474829 - MTA_Mm-int LTR MaLR 0 1098 1 9 926 3665 10 0 0 chr13 44809483 44809879 -75474433 - MTA_Mm LTR MaLR 0 396 1 9 926 424 301 25 65 chr13 44810055 44810254 -75474058 - B3A SINE B2 -1 197 7 9 926 1137 56 14 7 chr13 44810274 44810418 -75473894 + B1_Mm SINE Alu 1 145 -2 9 926 302 262 11 77 chr13 44810441 44810532 -75473780 - B1F1 SINE Alu -51 98 14 9 926 313 315 0 0 chr13 44810647 44810720 -75473592 + ID4_ SINE ID 3 75 -8 9 926 186 43 0 0 chr13 44810722 44810745 -75473567 + (CAT)n Simple_repeat Simple_repeat 3 25 0 9 926 195 69 0 0 chr13 44811250 44811279 -75473033 + (T)n Simple_repeat Simple_repeat 1 29 0 9 926 620 196 3 272 chr13 44811562 44811670 -75472642 - MTC LTR MaLR -13 408 277 9 926 904 86 41 41 chr13 44811670 44811816 -75472496 + B1_Mus2 SINE Alu 1 146 -1 9 926 620 183 0 299 chr13 44811816 44811895 -75472417 - MTC LTR MaLR -86 335 299 9 926 819 143 7 21 chr13 44811895 44812038 -75472274 + B1_Mur3 SINE Alu 5 145 -4 9 926 620 211 342 166 chr13 44812038 44812281 -75472031 - MTC LTR MaLR -123 298 1 9 926 1249 41 0 0 chr13 44812349 44812496 -75471816 + B1_Mm SINE Alu 1 147 0 9 926 337 240 112 28 chr13 44812813 44812920 -75471392 + PB1D7 SINE Alu 5 120 0 9 926 207 0 0 0 chr13 44813180 44813203 -75471109 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 926 1024 59 59 0 chr13 44813203 44813339 -75470973 - B1_Mus2 SINE Alu -3 144 1 9 926 438 90 75 0 chr13 44813422 44813489 -75470823 - B1_Mur2 SINE Alu 0 149 78 9 926 316 253 41 21 chr13 44813953 44814050 -75470262 - MLT1B LTR MaLR -115 275 177 9 926 489 53 40 0 chr13 44814057 44814133 -75470179 + L1Md_F2 LINE L1 6503 6581 -1 9 926 1061 94 0 0 chr13 44814133 44814271 -75470041 + B1_Mus2 SINE Alu 1 138 -9 9 926 224 30 0 29 chr13 44814271 44814305 -75470007 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 9 926 325 324 78 0 chr13 44814622 44814724 -75469588 - B1_Mus1 SINE Alu -29 119 10 9 926 189 0 0 0 chr13 44814850 44814871 -75469441 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 9 926 954 47 62 0 chr13 44814880 44815008 -75469304 - B1_Mus2 SINE Alu -1 146 11 9 926 360 0 0 0 chr13 44815097 44815137 -75469175 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 926 1231 54 0 0 chr13 44815365 44815512 -75468800 - B1_Mm SINE Alu 0 147 1 9 926 303 93 0 0 chr13 44815556 44815599 -75468713 + (GGGA)n Simple_repeat Simple_repeat 4 46 0 9 926 24 0 0 0 chr13 44815768 44815792 -75468520 + AT_rich Low_complexity Low_complexity 1 24 0 9 926 856 221 60 20 chr13 44815810 44816009 -75468303 - B3 SINE B2 -6 210 4 9 926 276 77 0 0 chr13 44816111 44816150 -75468162 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 926 256 261 97 107 chr13 44816160 44816263 -75468049 - RSINE1 SINE B4 -63 102 1 9 926 391 314 41 0 chr13 44816270 44816391 -75467921 - ID_B1 SINE B4 -7 217 92 9 926 413 276 113 8 chr13 44816462 44816586 -75467726 - B1_Mur1 SINE Alu -12 137 1 9 926 727 204 8 0 chr13 44816599 44816731 -75467581 - B3 SINE B2 -82 134 2 9 926 1069 90 21 0 chr13 44816777 44816922 -75467390 - B1_Mus1 SINE Alu 0 148 1 9 926 304 273 65 0 chr13 44816950 44817027 -75467285 - ID4_ SINE ID 0 83 2 9 926 195 42 0 0 chr13 44817031 44817055 -75467257 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 9 926 505 173 221 26 chr13 44817055 44817168 -75467144 - B1_Mus1 SINE Alu -13 135 1 9 926 738 194 34 14 chr13 44817256 44817402 -75466910 - B1_Mur2 SINE Alu 0 149 1 9 926 189 0 0 0 chr13 44817410 44817431 -75466881 + (T)n Simple_repeat Simple_repeat 1 21 0 9 926 498 243 8 51 chr13 44817431 44817548 -75466764 - PB1D9 SINE Alu 0 120 9 9 926 603 244 31 75 chr13 44818123 44818349 -75465963 + B3 SINE B2 1 216 0 9 926 207 100 0 0 chr13 44818359 44818389 -75465923 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 9 926 498 258 29 43 chr13 44818574 44818712 -75465600 - ID_B1 SINE B4 -9 215 80 9 926 1186 47 0 20 chr13 44818907 44819058 -75465254 - B1_Mus1 SINE Alu 0 148 1 9 926 22 0 0 0 chr13 44819065 44819087 -75465225 + AT_rich Low_complexity Low_complexity 1 22 0 9 926 936 149 27 0 chr13 44819087 44819235 -75465077 - B2_Mm2 SINE B2 -43 152 1 9 926 492 246 78 9 chr13 44819578 44819693 -75464619 - RSINE1 SINE B4 -42 123 1 9 926 283 0 0 0 chr13 44819729 44819771 -75464541 + L1Md_A LINE L1 6541 6582 0 9 926 390 200 111 0 chr13 44820260 44820350 -75463962 - ID_B1 SINE B4 0 224 125 9 926 632 122 122 0 chr13 44820475 44820582 -75463730 - PB1D9 SINE Alu 0 120 1 9 926 715 172 8 16 chr13 44820617 44820741 -75463571 - B1_Mur4 SINE Alu 0 150 28 9 926 231 228 125 12 chr13 44820680 44820760 -75463552 + YREP_Mm Unknown Unknown 226 314 -1498 9 926 378 307 14 54 chr13 44820896 44821044 -75463268 - B4A SINE B4 -150 142 1 9 926 353 226 83 64 chr13 44821076 44821185 -75463127 - PB1D9 SINE Alu -1 119 9 9 926 228 293 40 13 chr13 44821193 44821269 -75463043 - Charlie14a DNA MER1_type -1081 83 6 9 926 1182 75 0 0 chr13 44821323 44821469 -75462843 - B1_Mm SINE Alu 0 147 2 9 926 765 165 22 29 chr13 44821506 44821643 -75462669 + B1_Mur3 SINE Alu 9 144 -5 9 926 351 113 0 0 chr13 44821816 44821869 -75462443 + (TA)n Simple_repeat Simple_repeat 1 53 0 9 926 287 208 57 0 chr13 44821869 44821922 -75462390 - B1_Mus1 SINE Alu -85 63 8 9 926 368 176 109 42 chr13 44821972 44821988 -75462324 + MT2B LTR ERVL 152 168 -433 9 926 1095 67 0 0 chr13 44821988 44822123 -75462189 + B1_Mm SINE Alu 1 135 -12 9 926 510 17 0 0 chr13 44822125 44822184 -75462128 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 9 926 368 176 109 42 chr13 44822184 44822283 -75462029 + MT2B LTR ERVL 169 273 -328 9 926 611 175 71 48 chr13 44822190 44822300 -75462012 + B1_Mur1 SINE Alu 21 139 -10 9 926 216 0 0 0 chr13 44822300 44822324 -75461988 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 926 611 175 71 48 chr13 44822324 44822339 -75461973 + B1_Mur1 SINE Alu 140 149 0 9 926 223 382 0 0 chr13 44822461 44822550 -75461762 - MIR3 SINE MIR -6 202 114 9 926 383 215 17 70 chr13 44822562 44822677 -75461635 + PB1D9 SINE Alu 1 109 -11 9 926 465 321 22 51 chr13 44822821 44822959 -75461353 + RSINE1 SINE B4 3 136 -29 9 926 564 275 81 0 chr13 44823036 44823185 -75461127 + B3A SINE B2 1 161 -37 9 926 201 39 0 0 chr13 44823189 44823215 -75461097 + (CA)n Simple_repeat Simple_repeat 2 27 0 9 926 336 248 65 65 chr13 44823521 44823535 -75460777 + MT2B LTR ERVL 152 165 -436 9 926 405 243 54 36 chr13 44823535 44823646 -75460666 + PB1D9 SINE Alu 3 115 -5 9 926 201 74 0 0 chr13 44823698 44823725 -75460587 + (T)n Simple_repeat Simple_repeat 1 27 0 9 926 24 0 0 0 chr13 44825700 44825724 -75458588 + GC_rich Low_complexity Low_complexity 1 24 0 9 926 246 125 0 0 chr13 44825834 44825882 -75458430 + (CCGGG)n Simple_repeat Simple_repeat 3 50 0 9 926 21 71 0 0 chr13 44825883 44825925 -75458387 + GC_rich Low_complexity Low_complexity 1 42 0 9 927 267 103 0 0 chr13 44826905 44826944 -75457368 + (T)n Simple_repeat Simple_repeat 1 39 0 9 927 216 0 0 0 chr13 44828066 44828090 -75456222 + (T)n Simple_repeat Simple_repeat 1 24 0 9 927 26 30 0 0 chr13 44828918 44828951 -75455361 + GC_rich Low_complexity Low_complexity 1 33 0 9 927 217 344 91 84 chr13 44830628 44830771 -75453541 - RSINE1 SINE B4 -17 148 5 9 927 309 260 124 48 chr13 44830808 44830913 -75453399 + ID_B1 SINE B4 103 215 -9 9 927 512 253 144 17 chr13 44830929 44831110 -75453202 + ID_B1 SINE B4 12 215 -9 9 927 517 248 16 163 chr13 44831189 44831300 -75453012 + ID_B1 SINE B4 4 217 -7 9 927 593 169 36 71 chr13 44831300 44831440 -75452872 + B1_Mur1 SINE Alu 8 142 -7 9 927 578 171 16 41 chr13 44831846 44831968 -75452344 - B3 SINE B2 -95 121 3 9 927 864 104 67 0 chr13 44832032 44832167 -75452145 - B1_Mus1 SINE Alu 0 148 5 9 927 674 224 167 18 chr13 44832823 44833050 -75451262 + Tigger13a DNA MER2_type 109 369 -402 9 927 322 258 10 30 chr13 44833265 44833365 -75450947 + PB1D7 SINE Alu 23 120 0 9 927 412 313 17 0 chr13 44833443 44833558 -75450754 - ID_B1 SINE B4 -20 204 88 9 927 35 0 0 0 chr13 44833561 44833596 -75450716 + AT_rich Low_complexity Low_complexity 1 35 0 9 927 309 279 58 0 chr13 44833787 44833873 -75450439 - PB1D7 SINE Alu -8 112 22 9 927 616 190 13 0 chr13 44834028 44834186 -75450126 + (TATG)n Simple_repeat Simple_repeat 3 162 0 9 927 554 239 14 35 chr13 44834186 44834329 -75449983 - RSINE1 SINE B4 0 165 26 9 927 1090 53 0 0 chr13 44834500 44834631 -75449681 - B1_Mus1 SINE Alu -13 135 5 9 927 1674 27 0 0 chr13 44835090 44835276 -75449036 + B2_Mm1a SINE B2 2 187 -6 9 927 1755 131 118 17 chr13 44835558 44835914 -75448398 + MTC LTR MaLR 4 395 -26 9 927 425 286 119 21 chr13 44836534 44836727 -75447585 + MIRc SINE MIR 52 263 -5 9 927 772 110 154 6 chr13 44836832 44836988 -75447324 - B2_Mm2 SINE B2 -15 180 2 1 927 381 101 0 0 chr13 44837524 44837593 -75446719 - L1Md_F2 LINE L1 0 6582 6514 1 927 1144 124 28 0 chr13 44837598 44837775 -75446537 - B2_Mm1t SINE B2 -10 183 2 1 927 490 212 20 10 chr13 44837785 44837885 -75446427 - B1_Mur3 SINE Alu -42 107 7 1 927 209 252 135 48 chr13 44839101 44839205 -75445107 + MIRb SINE MIR 23 135 -133 1 927 323 161 227 11 chr13 44839889 44839977 -75444335 - B1_Mus1 SINE Alu -33 115 9 1 927 21 0 0 0 chr13 44840188 44840209 -75444103 + AT_rich Low_complexity Low_complexity 1 21 0 1 927 409 230 42 56 chr13 44840209 44840352 -75443960 - B1_Mur4 SINE Alu -6 144 4 1 927 262 246 32 121 chr13 44840422 44840579 -75443733 - RSINE1 SINE B4 0 165 23 1 927 729 0 0 0 chr13 44840614 44840695 -75443617 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 1 927 210 37 0 0 chr13 44840808 44840835 -75443477 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 927 1109 77 0 0 chr13 44840837 44840980 -75443332 - B1_Mm SINE Alu -4 143 1 1 927 437 229 117 44 chr13 44841199 44841336 -75442976 - B1_Mur2 SINE Alu 0 149 3 1 927 234 91 0 0 chr13 44842202 44842235 -75442077 + (T)n Simple_repeat Simple_repeat 1 33 0 1 927 314 236 0 53 chr13 44842974 44843050 -75441262 - RSINE1 SINE B4 -41 124 53 1 927 23 0 0 0 chr13 44843068 44843091 -75441221 + AT_rich Low_complexity Low_complexity 1 23 0 1 927 432 196 192 50 chr13 44843777 44843938 -75440374 - L1MB7 LINE L1 -53 6131 5948 1 927 28 0 0 0 chr13 44843944 44843972 -75440340 + GC_rich Low_complexity Low_complexity 1 28 0 1 927 256 197 68 27 chr13 44844233 44844306 -75440006 + MTD LTR MaLR 114 189 -230 1 927 198 0 0 0 chr13 44844416 44844438 -75439874 + (T)n Simple_repeat Simple_repeat 1 22 0 1 927 1165 144 50 0 chr13 44844904 44845084 -75439228 - LSU-rRNA_Hsa rRNA rRNA -515 4520 4332 1 927 568 183 70 0 chr13 44845138 44845253 -75439059 - B3 SINE B2 -86 130 8 1 927 555 204 52 29 chr13 44845263 44845399 -75438913 - B1_Mus1 SINE Alu -9 139 1 1 927 691 191 43 12 chr13 44845456 44845620 -75438692 - B2_Mm2 SINE B2 -26 169 1 1 927 381 204 215 0 chr13 44845874 44845967 -75438345 - B1_Mur3 SINE Alu -15 134 22 1 927 804 206 110 11 chr13 44846272 44846454 -75437858 - B3 SINE B2 -5 211 12 1 927 236 266 24 48 chr13 44846381 44846464 -75437848 - RSINE1 SINE B4 -82 83 3 1 927 1273 103 43 0 chr13 44849224 44849409 -75434903 - B2_Mm1a SINE B2 0 193 1 1 927 873 65 49 28 chr13 44849761 44849903 -75434409 + B1_Mm SINE Alu 3 147 0 1 927 242 181 177 5 chr13 44851676 44851757 -75432555 - B1F1 SINE Alu -18 99 10 1 927 1065 97 0 0 chr13 44852662 44852807 -75431505 + B1_Mus1 SINE Alu 2 146 -2 1 927 264 59 0 0 chr13 44853264 44853298 -75431014 + (T)n Simple_repeat Simple_repeat 1 34 0 1 927 645 146 15 115 chr13 44853345 44853497 -75430815 - B3 SINE B2 0 216 70 1 927 662 117 10 0 chr13 44853559 44853662 -75430650 - B2_Mm2 SINE B2 -88 107 4 1 927 564 15 0 0 chr13 44854129 44854194 -75430118 + (TC)n Simple_repeat Simple_repeat 2 66 0 1 927 342 265 50 50 chr13 44854270 44854409 -75429903 - B3 SINE B2 -61 155 17 1 927 39 22 0 0 chr13 44854589 44854635 -75429677 + AT_rich Low_complexity Low_complexity 1 46 0 1 927 512 315 75 53 chr13 44854957 44855222 -75429090 - B4A SINE B4 -12 280 10 1 927 294 26 0 0 chr13 44855830 44855868 -75428444 - B1_Mus2 SINE Alu -109 38 1 1 927 258 105 0 0 chr13 44856897 44856935 -75427377 + (T)n Simple_repeat Simple_repeat 1 38 0 1 927 1642 16 16 0 chr13 44856992 44857176 -75427136 - B2_Mm1a SINE B2 -5 188 2 1 927 1255 122 165 23 chr13 44857188 44857449 -75426863 - Lx LINE L1 -7 6647 6350 1 927 216 97 0 0 chr13 44857812 44857843 -75426469 + (CCTG)n Simple_repeat Simple_repeat 1 31 0 1 927 305 204 0 18 chr13 44857847 44857902 -75426410 + MurSatRep1 Unknown Unknown 149 202 -1935 1 927 408 99 0 0 chr13 44858198 44858269 -75426043 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 927 258 156 0 0 chr13 44858273 44858318 -75425994 + (CACG)n Simple_repeat Simple_repeat 1 45 0 1 927 402 237 34 42 chr13 44858578 44858697 -75425615 - B3 SINE B2 -32 184 67 1 927 328 205 29 154 chr13 44858735 44858839 -75425473 - B1_Mur3 SINE Alu -58 91 1 1 927 1676 31 0 0 chr13 44859204 44859396 -75424916 - B2_Mm1t SINE B2 0 193 2 1 927 243 176 200 13 chr13 44859702 44859777 -75424535 - B1_Mur4 SINE Alu -60 90 2 1 927 641 65 0 0 chr13 44859841 44859934 -75424378 + B1_Mm SINE Alu 2 94 -53 1 927 468 132 0 0 chr13 44859957 44860033 -75424279 - BC1_Mm scRNA scRNA -76 76 1 1 927 375 23 0 0 chr13 44860383 44860427 -75423885 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 927 313 209 0 148 chr13 44860759 44860860 -75423452 - PB1D9 SINE Alu 0 120 35 1 927 257 333 40 10 chr13 44860993 44861093 -75423219 - RSINE1 SINE B4 -62 103 1 1 927 293 268 93 0 chr13 44861093 44861190 -75423122 - PB1D10 SINE Alu 0 117 12 1 927 239 328 0 0 chr13 44861597 44861658 -75422654 + ID4 SINE ID 15 75 -8 1 927 761 83 233 0 chr13 44861762 44861882 -75422430 - B1_Mus1 SINE Alu 0 148 1 1 927 931 117 5 27 chr13 44861884 44862068 -75422244 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 1 927 978 96 150 6 chr13 44862069 44862236 -75422076 - B2_Mm2 SINE B2 -3 192 2 1 927 1601 42 5 0 chr13 44862370 44862560 -75421752 + B2_Mm1t SINE B2 2 192 -1 1 927 394 313 39 94 chr13 44863356 44863589 -75420723 + B4A SINE B4 5 224 -68 1 927 377 268 80 0 chr13 44863604 44863716 -75420596 - B3 SINE B2 -27 189 69 1 927 676 61 43 0 chr13 44864065 44864180 -75420132 + (GA)n Simple_repeat Simple_repeat 1 120 0 1 927 1411 79 32 0 chr13 44864686 44864875 -75419437 - B2_Mm2 SINE B2 0 195 1 1 927 259 279 133 9 chr13 44865123 44865228 -75419084 - PB1D7 SINE Alu 0 120 3 1 927 241 303 78 13 chr13 44865554 44865631 -75418681 + B1_Mur3 SINE Alu 2 83 -66 1 927 226 226 15 61 chr13 44865631 44865697 -75418615 + B1_Mur1 SINE Alu 46 108 -41 1 927 234 319 0 0 chr13 44865833 44865902 -75418410 + (TATATG)n Simple_repeat Simple_repeat 6 74 0 1 927 559 264 43 7 chr13 44866092 44866233 -75418079 - B3 SINE B2 -2 214 69 1 927 22 35 0 0 chr13 44866270 44866299 -75418013 + AT_rich Low_complexity Low_complexity 1 29 0 1 927 771 138 65 0 chr13 44867338 44867461 -75416851 - B1_Mur4 SINE Alu -19 131 1 1 927 1448 43 31 26 chr13 44867659 44867850 -75416462 - B2_Mm1a SINE B2 0 193 2 1 927 210 188 365 0 chr13 44867909 44867994 -75416318 + B1_Mur2 SINE Alu 6 121 -28 1 927 971 122 13 26 chr13 44868769 44868921 -75415391 - B1_Mur4 SINE Alu 0 150 1 1 927 240 35 0 0 chr13 44868944 44868973 -75415339 + (A)n Simple_repeat Simple_repeat 1 29 0 1 927 1081 36 58 0 chr13 44868985 44869123 -75415189 + B1_Mus2 SINE Alu 2 147 0 1 927 1159 74 98 0 chr13 44869132 44869295 -75415017 - B2_Mm1t SINE B2 -14 179 1 1 927 1309 99 22 0 chr13 44870118 44870299 -75414013 - B2_Mm2 SINE B2 -10 185 1 1 927 1144 55 7 7 chr13 44870310 44870457 -75413855 - B1_Mus2 SINE Alu 0 147 1 1 927 638 221 192 84 chr13 44870906 44871193 -75413119 + MTD LTR MaLR 48 365 -54 1 927 848 191 14 7 chr13 44871457 44871605 -75412707 + B1_Mur3 SINE Alu 1 149 0 1 927 270 0 0 0 chr13 44871664 44871694 -75412618 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 1 927 1057 73 29 0 chr13 44871695 44871831 -75412481 - B1_Mus1 SINE Alu -7 141 2 1 927 432 333 10 30 chr13 44871833 44872034 -75412278 - B3A SINE B2 -1 197 1 1 927 257 263 14 26 chr13 44872274 44872355 -75411957 + B1F2 SINE Alu 11 99 -21 1 927 213 39 0 0 chr13 44872355 44872381 -75411931 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1 927 429 271 207 30 chr13 44872440 44872638 -75411674 - ORR1D1 LTR MaLR -141 233 1 1 927 379 310 87 53 chr13 44873159 44873309 -75411003 - B3A SINE B2 -43 155 1 1 927 278 281 61 30 chr13 44873497 44873596 -75410716 + B3 SINE B2 105 206 -10 1 927 1191 29 0 0 chr13 44873722 44873860 -75410452 + B1_Mus2 SINE Alu 1 138 -9 1 927 754 191 7 28 chr13 44874327 44874472 -75409840 + B1_Mur3 SINE Alu 1 142 -7 1 927 370 282 127 0 chr13 44874483 44874593 -75409719 + B3 SINE B2 1 124 -92 1 927 259 195 0 0 chr13 44874655 44874696 -75409616 + B3 SINE B2 42 82 -134 1 927 791 161 162 25 chr13 44876206 44876404 -75407908 - URR1B DNA MER1_type 0 225 1 1 927 266 186 279 0 chr13 44877218 44877304 -75407008 - RSINE1 SINE B4 -48 117 8 1 927 904 68 0 22 chr13 44877916 44877997 -75406315 + (TCC)n Simple_repeat Simple_repeat 2 80 0 1 927 1445 34 6 0 chr13 44877997 44878176 -75406136 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 927 904 68 0 22 chr13 44878176 44878229 -75406083 + (TCC)n Simple_repeat Simple_repeat 3 55 0 1 927 1043 90 14 0 chr13 44878244 44878388 -75405924 - B1_Mm SINE Alu -1 146 1 1 927 347 124 13 0 chr13 44878441 44878505 -75405807 - B2_Mm2 SINE B2 -83 115 46 1 927 1170 95 59 0 chr13 44878551 44878720 -75405592 - B2_Mm1t SINE B2 -14 179 1 1 927 188 109 43 0 chr13 44878790 44878828 -75405484 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 1 927 1002 84 27 34 chr13 44878828 44878976 -75405336 - B1_Mus2 SINE Alu 0 147 1 1 927 188 109 43 0 chr13 44878976 44878983 -75405329 + (TTTG)n Simple_repeat Simple_repeat 1 7 0 1 927 330 171 266 18 chr13 44879685 44879798 -75404514 - Lx6 LINE L1 -513 6947 6807 1 927 251 89 0 62 chr13 44880210 44880258 -75404054 - B1_Mus1 SINE Alu -101 47 3 1 927 438 20 0 0 chr13 44880288 44880339 -75403973 + (TC)n Simple_repeat Simple_repeat 2 52 0 1 927 25 0 0 0 chr13 44882041 44882066 -75402246 + AT_rich Low_complexity Low_complexity 1 25 0 1 927 453 205 80 64 chr13 44882370 44882495 -75401817 - B3 SINE B2 -86 130 4 1 927 21 36 0 0 chr13 44884058 44884086 -75400226 + AT_rich Low_complexity Low_complexity 1 28 0 1 927 314 164 0 0 chr13 44884602 44884657 -75399655 - B1_Mus1 SINE Alu -58 90 36 1 927 595 231 0 63 chr13 44885258 44885401 -75398911 - B1_Mm SINE Alu -13 134 1 1 927 180 0 0 0 chr13 44885982 44886002 -75398310 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1 927 36 0 0 0 chr13 44886573 44886609 -75397703 + AT_rich Low_complexity Low_complexity 1 36 0 1 927 501 278 48 66 chr13 44888591 44888756 -75395556 - RSINE1 SINE B4 -2 163 1 1 927 249 237 89 38 chr13 44888888 44888967 -75395345 - PB1D9 SINE Alu -17 103 21 1 927 222 37 0 0 chr13 44888992 44889019 -75395293 + (CAGG)n Simple_repeat Simple_repeat 3 29 0 1 927 290 213 0 0 chr13 44889028 44889075 -75395237 - B1F1 SINE Alu -96 53 7 1 927 306 0 0 0 chr13 44889424 44889458 -75394854 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 927 952 102 15 0 chr13 44889458 44889595 -75394717 - B2_Mm2 SINE B2 -50 145 7 1 927 364 216 98 49 chr13 44890768 44890870 -75393442 - B1_Mur2 SINE Alu -1 148 42 1 927 231 189 0 0 chr13 44891545 44891598 -75392714 + CT-rich Low_complexity Low_complexity 1 53 0 1 927 234 243 164 10 chr13 44892252 44892356 -75391956 + B1F SINE Alu 21 140 -9 1 927 658 224 246 8 chr13 44894118 44894374 -75389938 + RMER1B Other Other 735 1051 -15 1 927 263 296 49 0 chr13 44894644 44894725 -75389587 - RSINE1 SINE B4 -72 93 9 1 927 220 303 18 116 chr13 44894982 44895094 -75389218 - B1_Mus2 SINE Alu -17 130 30 1 927 485 272 90 48 chr13 44895108 44895293 -75389019 - B3A SINE B2 0 198 6 1 927 431 269 0 9 chr13 44895293 44895402 -75388910 - PB1D9 SINE Alu -11 109 2 1 927 406 242 50 63 chr13 44895994 44896153 -75388159 - CYRA11_Mm Unknown Y-chromosome -289 328 172 1 927 727 147 29 29 chr13 44896014 44896154 -75388158 + URR1A DNA MER1_type 87 226 0 1 927 1120 123 35 0 chr13 44896283 44896453 -75387859 - B2_Mm2 SINE B2 -19 176 1 1 927 360 0 0 0 chr13 44896490 44896530 -75387782 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 927 272 271 90 37 chr13 44896654 44896788 -75387524 - B4A SINE B4 -151 141 1 1 927 295 229 184 0 chr13 44897008 44897117 -75387195 + RSINE1 SINE B4 13 141 -24 1 927 233 29 29 0 chr13 44897117 44897151 -75387161 + (TGG)n Simple_repeat Simple_repeat 2 36 0 1 927 288 296 46 39 chr13 44897600 44897730 -75386582 + B3A SINE B2 2 132 -66 1 927 385 214 135 0 chr13 44897884 44897973 -75386339 - B1_Mur2 SINE Alu -44 105 5 1 927 1638 42 0 0 chr13 44898016 44898208 -75386104 - B2_Mm1t SINE B2 0 193 2 1 927 1666 36 0 0 chr13 44899345 44899538 -75384774 - B2_Mm1t SINE B2 0 193 1 1 927 186 43 0 0 chr13 44899769 44899792 -75384520 + (C)n Simple_repeat Simple_repeat 1 23 0 1 927 312 263 111 40 chr13 44900389 44900488 -75383824 - B3A SINE B2 -11 187 82 1 927 1107 273 232 18 chr13 44900814 44901440 -75382872 - Lx8 LINE L1 -329 7144 6385 1 927 491 225 80 18 chr13 44901527 44901640 -75382672 - B1_Mus2 SINE Alu 0 147 28 1 927 226 273 0 0 chr13 44901694 44901749 -75382563 - PB1D9 SINE Alu -65 55 1 1 927 671 316 43 14 chr13 44902992 44903201 -75381111 - B4A SINE B4 -74 218 4 1 927 282 134 29 15 chr13 44903361 44903429 -75380883 + CT-rich Low_complexity Low_complexity 2 70 0 1 927 240 35 0 0 chr13 44903438 44903467 -75380845 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 1 927 1013 96 0 0 chr13 44903489 44903624 -75380688 - B1_Mus1 SINE Alu -11 137 3 1 927 657 190 105 23 chr13 44904676 44904848 -75379464 + B2_Mm2 SINE B2 2 187 -8 1 927 260 190 0 112 chr13 44905570 44905659 -75378653 - B3 SINE B2 0 216 138 1 927 1675 21 0 0 chr13 44907608 44907801 -75376511 - B2_Mm1a SINE B2 0 193 1 1 927 24 0 0 0 chr13 44908476 44908500 -75375812 + AT_rich Low_complexity Low_complexity 1 24 0 1 927 195 69 0 0 chr13 44908509 44908538 -75375774 + (T)n Simple_repeat Simple_repeat 1 29 0 1 927 282 237 25 35 chr13 44909176 44909276 -75375036 + PB1D10 SINE Alu 45 136 -13 1 927 255 294 59 0 chr13 44910459 44910527 -75373785 + RSINE1 SINE B4 53 124 -41 1 927 378 271 40 16 chr13 44912881 44913005 -75371307 - RMER10A LTR ERVL -286 156 30 1 927 386 159 16 0 chr13 44913039 44913102 -75371210 - B1_Mur3 SINE Alu -27 122 59 1 927 282 56 0 0 chr13 44913286 44913322 -75370990 + (TCC)n Simple_repeat Simple_repeat 3 38 0 1 927 30 0 0 0 chr13 44914108 44914138 -75370174 + AT_rich Low_complexity Low_complexity 1 30 0 1 927 222 191 0 0 chr13 44914178 44914225 -75370087 + (CATG)n Simple_repeat Simple_repeat 2 48 0 1 927 289 301 9 37 chr13 44914402 44914509 -75369803 + Tigger5 DNA MER2_type 2303 2406 0 1 927 198 0 0 0 chr13 44915303 44915325 -75368987 + (T)n Simple_repeat Simple_repeat 1 22 0 1 927 433 234 184 45 chr13 44915598 44915777 -75368535 - B3 SINE B2 -12 204 1 1 927 223 193 18 0 chr13 44915786 44915843 -75368469 + (TTTG)n Simple_repeat Simple_repeat 1 58 0 1 927 1098 95 0 7 chr13 44915845 44915993 -75368319 - B1_Mm SINE Alu 0 147 1 1 927 21 0 0 0 chr13 44916500 44916521 -75367791 + AT_rich Low_complexity Low_complexity 1 21 0 1 927 892 157 92 60 chr13 44918191 44918408 -75365904 + URR1B DNA MER1_type 1 224 -1 1 927 369 0 0 0 chr13 44919112 44919153 -75365159 + (TATG)n Simple_repeat Simple_repeat 3 43 0 1 927 1589 52 0 0 chr13 44919986 44920178 -75364134 - B2_Mm1t SINE B2 -1 192 1 1 927 1078 59 7 0 chr13 44920340 44920475 -75363837 - B1_Mus1 SINE Alu -9 139 4 1 927 386 103 0 21 chr13 44920495 44920561 -75363751 - B2_Mm2 SINE B2 -107 109 47 1 927 1284 99 6 0 chr13 44920577 44920758 -75363554 - B2_Mm2 SINE B2 -13 182 1 1 927 770 244 50 10 chr13 44920788 44920987 -75363325 - B3 SINE B2 -4 212 6 1 927 432 293 135 42 chr13 44922217 44922409 -75361903 - ORR1E LTR MaLR -53 306 97 1 927 363 376 6 41 chr13 44922564 44922733 -75361579 + B3A SINE B2 14 176 -22 1 927 352 261 111 43 chr13 44923183 44923391 -75360921 - Lx7 LINE L1 -377 7319 7098 1 927 761 192 60 0 chr13 44923399 44923550 -75360762 - ORR1B2 LTR MaLR -8 359 200 1 927 24 0 0 0 chr13 44923753 44923777 -75360535 + AT_rich Low_complexity Low_complexity 1 24 0 1 927 470 287 208 6 chr13 44923808 44923976 -75360336 - B3 SINE B2 -12 204 3 1 927 293 218 34 124 chr13 44925508 44925597 -75358715 - B1F1 SINE Alu -63 84 4 1 927 229 281 0 59 chr13 44929211 44929279 -75355033 - MT2B LTR ERVL -476 125 62 1 927 657 180 0 39 chr13 44929283 44929410 -75354902 - MT2B LTR ERVL -476 125 4 1 927 1940 156 102 78 chr13 44929410 44929714 -75354598 - MERVL_2A-int LTR ERVL -4 5757 5444 1 927 1195 49 0 0 chr13 44929714 44929858 -75354454 + B1_Mm SINE Alu 2 145 -2 1 927 1940 156 102 78 chr13 44929858 44930139 -75354173 - MERVL_2A-int LTR ERVL -318 5443 5158 1 927 236 247 158 12 chr13 44931111 44931193 -75353119 - B1_Mur3 SINE Alu -19 130 37 1 927 327 307 97 69 chr13 44931193 44931351 -75352961 + B3 SINE B2 27 185 -31 1 927 675 35 0 0 chr13 44931390 44931476 -75352836 + (TC)n Simple_repeat Simple_repeat 1 86 0 1 927 324 0 0 0 chr13 44931476 44931512 -75352800 + HAL1-3A_ME LINE L1 1978 2013 -845 1 927 273 29 0 0 chr13 44932423 44932457 -75351855 + (T)n Simple_repeat Simple_repeat 1 34 0 1 927 1172 48 0 0 chr13 44932507 44932652 -75351660 + B1_Mm SINE Alu 3 147 0 1 927 358 267 0 87 chr13 44933056 44933183 -75351129 - B1_Mur4 SINE Alu -26 124 9 1 927 200 226 95 16 chr13 44933355 44933418 -75350894 - MIR SINE MIR -159 103 36 1 927 32 26 0 0 chr13 44934089 44934128 -75350184 + AT_rich Low_complexity Low_complexity 1 39 0 1 927 312 94 0 0 chr13 44935156 44935209 -75349103 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 1 927 218 261 0 0 chr13 44936116 44936162 -75348150 + CT-rich Low_complexity Low_complexity 4 49 0 1 927 225 0 0 0 chr13 44936387 44936412 -75347900 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 927 297 0 0 0 chr13 44941694 44941727 -75342585 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 927 252 86 0 0 chr13 44941867 44941902 -75342410 + (T)n Simple_repeat Simple_repeat 1 35 0 1 927 2055 35 0 23 chr13 44941915 44942174 -75342138 - L1Md_A LINE L1 -2 6580 6328 1 927 3365 86 28 4 chr13 44942174 44942709 -75341603 - L1Md_A LINE L1 -5755 969 422 1 927 205 182 0 0 chr13 44943375 44943408 -75340904 + polypyrimidine Low_complexity Low_complexity 3 35 0 1 927 540 144 28 12 chr13 44943976 44944089 -75340223 - B2_Mm2 SINE B2 -61 155 33 1 927 1154 68 0 13 chr13 44944128 44944278 -75340034 - B1_Mus1 SINE Alu 0 148 1 1 927 472 175 0 0 chr13 44944723 44944803 -75339509 - B2_Mm2 SINE B2 -115 80 1 1 927 541 222 178 17 chr13 44945643 44945817 -75338495 + B3 SINE B2 9 210 -6 1 927 345 277 0 46 chr13 44946090 44946177 -75338135 - B3 SINE B2 -133 83 1 1 927 180 0 0 0 chr13 44946296 44946316 -75337996 + (T)n Simple_repeat Simple_repeat 1 20 0 1 927 342 0 0 0 chr13 44946416 44946454 -75337858 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 927 414 0 0 0 chr13 44948261 44948307 -75336005 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 927 283 194 212 7 chr13 44948310 44948405 -75335907 - B1_Mus1 SINE Alu -43 105 5 1 927 1081 69 14 0 chr13 44948687 44948831 -75335481 - B1_Mm SINE Alu 0 147 2 1 927 279 260 171 29 chr13 44949204 44949359 -75334953 + B4A SINE B4 5 175 -117 1 927 796 226 147 92 chr13 44951075 44951402 -75332910 + ORR1C2 LTR MaLR 21 365 -19 1 927 21 0 0 0 chr13 44952783 44952804 -75331508 + GC_rich Low_complexity Low_complexity 1 21 0 1 927 283 192 55 0 chr13 44953211 44953284 -75331028 - URR1A DNA MER1_type -71 155 79 1 927 266 138 0 17 chr13 44954185 44954244 -75330068 + (TTTG)n Simple_repeat Simple_repeat 2 59 0 1 927 269 237 0 0 chr13 44955846 44955905 -75328407 - B1_Mus2 SINE Alu -88 59 1 1 927 258 213 195 47 chr13 44955916 44956044 -75328268 - B1_Mus1 SINE Alu 0 148 2 1 927 212 321 0 0 chr13 44956159 44956212 -75328100 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 927 1300 112 32 0 chr13 44957181 44957368 -75326944 - B2_Mm1t SINE B2 0 193 1 1 927 369 0 0 0 chr13 44957490 44957531 -75326781 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 928 465 82 165 0 chr13 44957763 44957848 -75326464 + B2_Mm2 SINE B2 1 99 -96 1 928 211 337 65 43 chr13 44957932 44958025 -75326287 - B4A SINE B4 -150 142 48 1 928 224 322 189 0 chr13 44958419 44958509 -75325803 - RSINE1 SINE B4 -47 118 12 1 928 339 223 146 0 chr13 44958967 44959085 -75325227 - MTEa LTR MaLR -5 374 241 1 928 627 238 120 18 chr13 44960738 44960905 -75323407 + B3 SINE B2 5 188 -28 1 928 1281 55 4 0 chr13 44961211 44961397 -75322915 - B2_Mm2 SINE B2 0 193 2 1 928 26 0 0 0 chr13 44963036 44963062 -75321250 + AT_rich Low_complexity Low_complexity 1 26 0 1 928 318 26 0 0 chr13 44963795 44963834 -75320478 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 928 489 62 0 0 chr13 44964611 44964676 -75319636 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 928 2244 19 19 0 chr13 44964679 44964943 -75319369 + L1_Mm LINE L1 4173 4441 -1442 1 928 3951 35 31 4 chr13 44964940 44965455 -75318857 - LSU-rRNA_Hsa rRNA rRNA -3086 1949 1322 1 928 477 0 0 0 chr13 44965506 44965559 -75318753 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 928 637 267 47 60 chr13 44965586 44965821 -75318491 - B4A SINE B4 -60 232 1 1 928 261 0 0 0 chr13 44966188 44966217 -75318095 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1 928 328 239 0 0 chr13 44966734 44966805 -75317507 - ID4_ SINE ID -11 72 2 1 928 212 0 0 35 chr13 44968944 44968973 -75315339 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 928 23 33 0 0 chr13 44968989 44969019 -75315293 + AT_rich Low_complexity Low_complexity 1 30 0 1 928 1677 27 0 0 chr13 44970040 44970228 -75314084 - B2_Mm1t SINE B2 -5 188 1 1 928 527 248 0 58 chr13 44970311 44970448 -75313864 - B3 SINE B2 -79 137 9 1 928 308 259 83 9 chr13 44970455 44970564 -75313748 - PB1D9 SINE Alu -2 118 2 1 928 334 324 29 7 chr13 44970568 44970705 -75313607 - B1F SINE Alu 0 149 10 1 928 189 0 0 0 chr13 44971583 44971604 -75312708 + (CCTG)n Simple_repeat Simple_repeat 2 22 0 1 928 272 255 67 128 chr13 44971609 44971789 -75312523 - B3 SINE B2 -32 184 16 1 928 309 117 0 0 chr13 44974622 44974682 -75309630 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 928 293 343 119 9 chr13 44975242 44975351 -75308961 - RSINE1 SINE B4 -41 124 4 1 928 1411 68 5 35 chr13 44975429 44975627 -75308685 - B2_Mm1a SINE B2 -1 192 1 1 928 370 53 18 0 chr13 44976349 44976406 -75307906 + B1_Mm SINE Alu 90 147 0 1 928 1557 28 6 0 chr13 44976703 44976881 -75307431 + B2_Mm1t SINE B2 2 180 -13 1 928 180 0 0 0 chr13 44976881 44976901 -75307411 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 928 233 260 0 0 chr13 44977276 44977326 -75306986 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 928 22 0 0 0 chr13 44977417 44977439 -75306873 + AT_rich Low_complexity Low_complexity 1 22 0 1 928 1193 91 0 11 chr13 44978220 44978398 -75305914 + (TCCCC)n Simple_repeat Simple_repeat 5 180 0 1 928 1056 63 0 0 chr13 44978413 44978556 -75305756 - B1_Mus1 SINE Alu 0 148 6 1 928 393 276 207 0 chr13 44979056 44979201 -75305111 - B3 SINE B2 -40 176 2 1 928 474 206 21 0 chr13 44980506 44980603 -75303709 - B1_Mur4 SINE Alu -8 142 44 1 928 513 0 0 0 chr13 44980631 44980688 -75303624 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 928 22 0 0 0 chr13 44980846 44980868 -75303444 + AT_rich Low_complexity Low_complexity 1 22 0 1 928 2644 109 40 13 chr13 44981700 44982148 -75302164 - RLTR31B_Mm LTR ERVK -94 463 4 1 928 268 257 70 201 chr13 44984687 44984821 -75299491 - ID_B1 SINE B4 -24 200 15 1 928 284 212 62 0 chr13 44984821 44984901 -75299411 - BC1_Mm scRNA scRNA -53 99 15 1 928 876 78 148 0 chr13 44985317 44985445 -75298867 + B1_Mm SINE Alu 1 147 0 1 928 204 40 0 0 chr13 44985445 44985470 -75298842 + (A)n Simple_repeat Simple_repeat 1 25 0 1 928 986 128 0 13 chr13 44988615 44988765 -75295547 + B1_Mus1 SINE Alu 1 148 0 1 928 596 220 30 30 chr13 44989403 44989567 -75294745 - RMER10B LTR ERVL 0 398 235 1 928 579 164 18 9 chr13 44989589 44989700 -75294612 - RMER10B LTR ERVL -286 112 1 1 928 506 221 0 0 chr13 44990250 44990354 -75293958 + B1_Mur1 SINE Alu 30 133 -16 1 928 273 296 76 0 chr13 44991222 44991354 -75292958 - B1F SINE Alu 0 149 8 1 928 437 229 98 0 chr13 44992067 44992189 -75292123 - Lx4B LINE L1 -62 6996 6863 1 928 534 162 460 0 chr13 44992352 44992500 -75291812 - B3 SINE B2 0 216 1 1 928 1175 226 67 12 chr13 44992838 44993165 -75291147 - ORR1D1 LTR MaLR -15 359 15 1 928 379 281 0 20 chr13 44993891 44993989 -75290323 - PB1D7 SINE Alu 0 120 25 1 928 1223 187 154 28 chr13 44994334 44994658 -75289654 - ORR1B2 LTR MaLR 0 367 3 1 928 422 306 16 0 chr13 44995683 44995807 -75288505 + B1_Mur1 SINE Alu 6 131 -18 1 928 203 279 51 0 chr13 44996051 44996130 -75288182 + MER5A DNA MER1_type 1 83 -106 1 928 223 98 0 56 chr13 44996296 44996350 -75287962 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 928 1106 30 82 0 chr13 44996352 44996487 -75287825 - B1_Mm SINE Alu 0 147 2 1 928 882 0 0 0 chr13 44998781 44998879 -75285433 + (CTG)n Simple_repeat Simple_repeat 3 100 0 1 928 635 286 61 9 chr13 44998998 44999227 -75285085 - MLT1B LTR MaLR -108 282 42 1 928 207 100 0 0 chr13 44999277 44999307 -75285005 + (T)n Simple_repeat Simple_repeat 1 30 0 1 928 1260 117 11 5 chr13 44999311 44999500 -75284812 - B2_Mm1t SINE B2 -3 190 1 1 928 33 25 0 0 chr13 45000728 45000768 -75283544 + AT_rich Low_complexity Low_complexity 1 40 0 1 928 1180 49 14 0 chr13 45003761 45003905 -75280407 - B1_Mus2 SINE Alu 0 147 2 2 928 228 35 0 0 chr13 45004561 45004590 -75279722 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 928 189 0 0 0 chr13 45004713 45004734 -75279578 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 928 382 282 79 104 chr13 45004995 45005197 -75279115 - B4A SINE B4 -62 230 34 5 928 260 0 0 54 chr13 45007131 45007168 -75277144 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 6 928 703 120 37 0 chr13 45007194 45007302 -75277010 - B2_Mm2 SINE B2 -83 112 1 7 928 1854 153 151 14 chr13 45007624 45007976 -75276336 - MTC LTR MaLR -17 404 5 8 928 301 221 83 42 chr13 45010517 45010614 -75273698 - MTEa LTR MaLR -276 103 7 9 928 1455 185 135 71 chr13 45010924 45011398 -75272914 - RLTR20B2 LTR ERVK -1 562 1 1 928 733 185 151 49 chr13 45013070 45013275 -75271037 - URR1A DNA MER1_type 0 226 1 1 928 253 314 78 0 chr13 45014418 45014520 -75269792 - PB1D10 SINE Alu -7 110 1 1 928 186 211 98 118 chr13 45014999 45015101 -75269211 + L3 LINE CR1 3520 3619 -870 1 928 209 125 25 0 chr13 45015595 45015635 -75268677 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 1 928 279 0 0 0 chr13 45015752 45015783 -75268529 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 928 234 0 0 0 chr13 45018218 45018244 -75266068 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 928 230 231 35 0 chr13 45019713 45019783 -75264529 + PB1D7 SINE Alu 2 76 -41 1 928 362 295 107 0 chr13 45020070 45020182 -75264130 + B1_Mur1 SINE Alu 21 144 -5 1 928 271 288 149 26 chr13 45020560 45020674 -75263638 - MER20 DNA MER1_type -61 158 31 1 928 353 255 68 10 chr13 45020849 45020952 -75263360 + Lx7 LINE L1 6345 6453 -1243 2 928 709 240 179 12 chr13 45020992 45021146 -75263166 + ORR1D1 LTR MaLR 1 182 -192 2 928 252 0 0 0 chr13 45021146 45021174 -75263138 + (CGTG)n Simple_repeat Simple_repeat 4 31 0 2 928 709 240 179 12 chr13 45021174 45021276 -75263036 + ORR1D1 LTR MaLR 183 299 -75 2 928 1629 291 98 12 chr13 45021366 45022006 -75262306 + Lx7 LINE L1 6581 7275 -421 2 928 558 0 0 0 chr13 45022092 45022154 -75262158 + (GGGA)n Simple_repeat Simple_repeat 4 65 0 2 928 369 217 71 124 chr13 45022176 45022319 -75261993 + ORR1D1 LTR MaLR 5 128 -246 2 928 455 143 0 0 chr13 45023621 45023691 -75260621 + ORR1B1 LTR MaLR 325 394 0 2 928 1211 195 8 4 chr13 45023692 45023929 -75260383 + ORR1B1-int LTR MaLR 2 239 -1270 2 928 3920 172 115 158 chr13 45024121 45024585 -75259727 + ORR1B1-int LTR MaLR 198 535 -974 2 928 1716 31 0 0 chr13 45024585 45024778 -75259534 + B2_Mm1a SINE B2 1 193 0 2 928 3920 172 115 158 chr13 45024778 45025683 -75258629 + ORR1B1-int LTR MaLR 536 1509 0 2 928 1709 154 94 3 chr13 45025683 45025990 -75258322 + ORR1B1 LTR MaLR 1 335 -59 2 928 221 260 20 0 chr13 45026162 45026212 -75258100 + ID4 SINE ID 33 83 0 2 928 406 255 11 2 chr13 45026836 45026940 -75257372 - B3A SINE B2 -81 117 13 2 928 434 211 30 30 chr13 45027050 45027182 -75257130 + L1MB3 LINE L1 5774 5905 -278 2 928 419 274 42 50 chr13 45027295 45027414 -75256898 + B4A SINE B4 6 123 -169 3 928 483 279 32 38 chr13 45027565 45027751 -75256561 + B3A SINE B2 5 189 -9 3 928 191 325 26 13 chr13 45028315 45028393 -75255919 + MIRb SINE MIR 111 189 -79 3 928 197 65 0 31 chr13 45028584 45028616 -75255696 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 3 928 325 314 83 28 chr13 45029302 45029410 -75254902 - B1_Mus1 SINE Alu -34 114 1 3 928 436 261 60 0 chr13 45029664 45029798 -75254514 - L1MD LINE L1 -607 5752 5611 3 928 1232 88 0 37 chr13 45030592 45030781 -75253531 + B2_Mm2 SINE B2 1 182 -13 3 928 29 47 0 0 chr13 45030781 45030824 -75253488 + AT_rich Low_complexity Low_complexity 1 43 0 3 928 477 0 0 0 chr13 45030878 45030931 -75253381 + (TTA)n Simple_repeat Simple_repeat 2 54 0 3 928 1234 55 0 0 chr13 45031072 45031218 -75253094 - B1_Mm SINE Alu 0 147 2 3 928 1640 209 103 5 chr13 45032461 45032831 -75251481 + MTD LTR MaLR 1 406 -13 4 928 831 278 41 26 chr13 45032896 45033166 -75251146 + B4A SINE B4 11 284 -8 4 928 221 273 171 0 chr13 45033166 45033254 -75251058 + ID_B1 SINE B4 92 194 -30 4 928 190 194 0 31 chr13 45033332 45033396 -75250916 + CT-rich Low_complexity Low_complexity 2 63 0 4 928 461 241 0 7 chr13 45033808 45033908 -75250404 - B1F SINE Alu -21 96 1 4 928 221 320 0 37 chr13 45033848 45033929 -75250383 - B4 SINE B4 -147 145 68 4 928 21 0 0 0 chr13 45034232 45034253 -75250059 + AT_rich Low_complexity Low_complexity 1 21 0 4 928 353 294 36 29 chr13 45034279 45034419 -75249893 + B1F2 SINE Alu 1 141 -8 4 928 2936 154 13 60 chr13 45034514 45035067 -75249245 + RLTR24 LTR ERV1 1 527 -2 4 928 347 262 122 0 chr13 45035365 45035472 -75248840 + ORR1E LTR MaLR 1 120 -239 4 928 207 0 0 0 chr13 45035491 45035514 -75248798 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 928 583 293 93 0 chr13 45035525 45035675 -75248637 - B3 SINE B2 -51 165 2 5 928 252 294 109 16 chr13 45035722 45035795 -75248517 + ORR1E LTR MaLR 204 289 -90 4 928 234 0 0 0 chr13 45035795 45035821 -75248491 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 5 928 252 294 109 16 chr13 45035821 45035875 -75248437 + ORR1E LTR MaLR 290 342 -37 4 928 376 321 46 36 chr13 45036135 45036329 -75247983 + L1M5 LINE L1 5470 5665 -514 5 928 1293 96 20 46 chr13 45036344 45036540 -75247772 - B2_Mm2 SINE B2 -3 192 2 5 928 233 280 135 12 chr13 45036559 45036729 -75247583 + L1MB8 LINE L1 5798 5988 -190 5 928 665 251 120 28 chr13 45037535 45037785 -75246527 + B4A SINE B4 1 273 -19 5 928 222 37 0 0 chr13 45037798 45037825 -75246487 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 928 401 323 80 9 chr13 45037836 45038061 -75246251 + Lx9 LINE L1 7269 7509 -135 5 928 353 243 95 19 chr13 45038789 45038894 -75245418 + PB1D10 SINE Alu 3 115 -2 5 928 400 252 100 8 chr13 45038981 45039101 -75245211 + B3A SINE B2 61 191 -7 6 928 306 296 41 0 chr13 45039285 45039383 -75244929 + B1F1 SINE Alu 1 102 -47 6 928 819 124 76 49 chr13 45040543 45040687 -75243625 + B1_Mus1 SINE Alu 1 148 0 6 928 189 175 0 0 chr13 45040695 45040735 -75243577 + G-rich Low_complexity Low_complexity 3 42 0 6 928 231 305 34 0 chr13 45041207 45041266 -75243046 + ID4_ SINE ID 21 81 -2 6 928 186 0 88 0 chr13 45042978 45043012 -75241300 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 6 928 246 292 99 45 chr13 45043074 45043185 -75241127 - PB1D10 SINE Alu 0 117 1 6 928 615 222 155 11 chr13 45043437 45043624 -75240688 + ID_B1 SINE B4 8 221 -3 6 928 275 309 104 82 chr13 45043709 45043819 -75240493 + RSINE1 SINE B4 26 140 -25 6 928 279 0 0 0 chr13 45043819 45043850 -75240462 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 928 275 309 104 82 chr13 45043850 45043873 -75240439 + RSINE1 SINE B4 141 162 -3 6 928 236 139 0 0 chr13 45044544 45044580 -75239732 + ORR1B2 LTR MaLR 1 36 -331 7 928 719 248 64 0 chr13 45045241 45045443 -75238869 + B3 SINE B2 1 215 -1 7 928 377 247 10 40 chr13 45045443 45045544 -75238768 + RSINE1 SINE B4 47 144 -21 7 928 429 265 0 41 chr13 45045562 45045684 -75238628 + PB1D9 SINE Alu 4 120 0 7 928 273 317 192 0 chr13 45045699 45045803 -75238509 + PB1 SINE Alu 2 125 -2 7 928 29 0 0 0 chr13 45045893 45045922 -75238390 + AT_rich Low_complexity Low_complexity 1 29 0 7 928 216 0 0 0 chr13 45046582 45046606 -75237706 + (T)n Simple_repeat Simple_repeat 1 24 0 7 928 1215 48 7 0 chr13 45046606 45046752 -75237560 - B1_Mus1 SINE Alu 0 148 2 7 928 977 254 113 18 chr13 45047651 45047988 -75236324 + ORR1D2 LTR MaLR 1 369 -1 7 928 205 287 111 9 chr13 45048054 45048163 -75236149 - MIRm SINE MIR -36 172 45 7 928 502 257 26 17 chr13 45050165 45050280 -75234032 + RSINE1 SINE B4 34 149 -16 8 928 282 87 0 0 chr13 45050290 45050336 -75233976 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 928 441 250 61 26 chr13 45050383 45050498 -75233814 + PB1D7 SINE Alu 1 119 -1 8 928 372 284 28 47 chr13 45050942 45051049 -75233263 + B1F SINE Alu 15 119 -1 8 928 1682 148 117 19 chr13 45051301 45051625 -75232687 + ORR1C2 LTR MaLR 11 366 -18 8 928 32 43 0 0 chr13 45053396 45053442 -75230870 + AT_rich Low_complexity Low_complexity 1 46 0 8 928 577 157 9 61 chr13 45055299 45055414 -75228898 - B1_Mur3 SINE Alu -1 148 40 8 928 727 292 31 0 chr13 45055954 45056146 -75228166 - B3A SINE B2 0 198 1 8 928 1280 260 216 9 chr13 45056146 45056813 -75227499 - L1MEc LINE L1 -5410 990 186 8 928 250 276 174 0 chr13 45056971 45057069 -75227243 - B1F SINE Alu 0 149 35 8 928 349 310 42 33 chr13 45056988 45057108 -75227204 - ID_B1 SINE B4 -23 201 81 9 928 30 0 0 0 chr13 45057794 45057824 -75226488 + AT_rich Low_complexity Low_complexity 1 30 0 9 928 200 0 100 0 chr13 45057838 45057868 -75226444 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 9 928 1036 64 0 7 chr13 45057871 45058012 -75226300 - B1_Mus1 SINE Alu 0 148 9 9 928 369 0 0 0 chr13 45058045 45058086 -75226226 + (TG)n Simple_repeat Simple_repeat 1 41 0 9 928 543 274 49 31 chr13 45058139 45058301 -75226011 + RSINE1 SINE B4 1 165 0 9 928 243 246 0 32 chr13 45058406 45058469 -75225843 + MER103 DNA DNA 35 95 -71 9 928 2459 46 3 3 chr13 45058866 45059193 -75225119 - MTA_Mm LTR MaLR -69 327 1 9 928 264 315 74 0 chr13 45061343 45061451 -75222861 - PB1D10 SINE Alu -1 116 1 9 928 692 206 59 0 chr13 45061882 45062018 -75222294 - B1_Mur4 SINE Alu -5 145 2 9 928 347 198 8 137 chr13 45061914 45062031 -75222281 - MT2B LTR ERVL -344 257 156 1 928 1330 172 312 3 chr13 45062585 45062905 -75221407 - MTD LTR MaLR 0 419 1 1 928 1163 21 43 0 chr13 45063518 45063659 -75220653 + B1_Mus2 SINE Alu 1 147 0 1 928 2309 182 141 63 chr13 45064089 45065039 -75219273 + RLTR25A LTR ERVK 2 1017 -11 1 928 327 105 0 0 chr13 45065231 45065288 -75219024 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 928 342 197 171 0 chr13 45065626 45065702 -75218610 + B3A SINE B2 21 109 -89 1 928 429 200 270 0 chr13 45066044 45066159 -75218153 - B1_Mur2 SINE Alu -1 148 3 1 928 724 255 25 5 chr13 45066521 45066718 -75217594 + B3 SINE B2 2 202 -14 1 928 231 232 0 18 chr13 45066719 45066776 -75217536 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 1 928 786 231 97 13 chr13 45067385 45067613 -75216699 - RMER15 LTR ERVL -52 523 277 1 928 3214 52 10 12 chr13 45067664 45068070 -75216242 - MTB_Mm LTR MaLR -2 405 1 1 928 338 88 56 42 chr13 45068092 45068163 -75216149 - RMER15 LTR ERVL -465 110 39 1 928 410 310 7 7 chr13 45068391 45068537 -75215775 - ORR1E LTR MaLR -207 152 7 1 928 440 291 0 0 chr13 45069994 45070104 -75214208 + B1F SINE Alu 3 112 -37 1 928 1133 49 35 0 chr13 45070105 45070248 -75214064 + B1_Mus1 SINE Alu 1 148 0 1 928 785 197 14 7 chr13 45070335 45070483 -75213829 + B1_Mur2 SINE Alu 1 149 0 1 928 227 150 25 0 chr13 45070517 45070557 -75213755 + ID_B1 SINE B4 100 140 -84 1 928 390 108 0 0 chr13 45070557 45070622 -75213690 + (GGA)n Simple_repeat Simple_repeat 1 65 0 1 928 719 194 53 0 chr13 45071167 45071328 -75212984 + B3 SINE B2 34 206 -10 1 928 235 85 43 0 chr13 45071682 45071729 -75212583 + (TCCC)n Simple_repeat Simple_repeat 2 50 0 1 928 250 261 80 18 chr13 45072150 45072263 -75212049 - PB1 SINE Alu -2 125 6 1 928 622 238 121 30 chr13 45073722 45073921 -75210391 - ID_B1 SINE B4 -6 218 2 1 928 189 0 0 0 chr13 45073993 45074014 -75210298 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 1 928 244 197 30 15 chr13 45074133 45074200 -75210112 - MIRb SINE MIR -40 228 161 1 928 476 263 80 48 chr13 45074221 45074409 -75209903 - MER2 DNA MER2_type -146 199 6 1 928 180 0 0 0 chr13 45074585 45074605 -75209707 + (A)n Simple_repeat Simple_repeat 1 20 0 1 928 292 277 207 61 chr13 45074893 45075122 -75209190 + B4 SINE B4 50 286 -6 1 928 261 0 0 0 chr13 45075164 45075193 -75209119 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 928 443 209 38 0 chr13 45075637 45075742 -75208570 - B1F SINE Alu -1 148 40 1 928 477 0 0 0 chr13 45077464 45077517 -75206795 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 1 928 615 304 48 56 chr13 45077581 45077832 -75206480 + B4A SINE B4 3 251 -41 1 928 205 206 43 14 chr13 45078552 45078621 -75205691 + A-rich Low_complexity Low_complexity 2 72 0 1 928 239 216 66 26 chr13 45079328 45079404 -75204908 + MTEa LTR MaLR 301 379 0 1 928 1068 192 34 0 chr13 45079930 45080138 -75204174 + B3 SINE B2 1 215 -1 1 928 486 313 14 0 chr13 45080361 45080508 -75203804 - B1F SINE Alu 0 149 1 1 928 541 80 0 43 chr13 45080662 45080754 -75203558 + B1_Mm SINE Alu 57 144 -3 1 928 443 294 20 14 chr13 45081672 45081820 -75202492 - B1F2 SINE Alu 0 149 1 1 928 806 210 25 0 chr13 45081858 45082015 -75202297 - B3 SINE B2 -48 168 8 1 928 421 253 62 88 chr13 45082628 45082788 -75201524 - RSINE1 SINE B4 -2 163 8 1 928 4106 179 80 26 chr13 45082895 45083780 -75200532 + RMER1A Other Other 95 1027 -3 1 928 839 290 70 17 chr13 45084413 45084772 -75199540 - MTE2a LTR MaLR -14 405 35 1 928 1135 56 28 0 chr13 45084802 45084945 -75199367 - B1_Mus2 SINE Alu 0 147 1 1 928 359 270 50 10 chr13 45085091 45085192 -75199120 - MTE2a LTR MaLR -222 157 53 1 928 417 267 67 25 chr13 45085577 45085696 -75198616 + B4 SINE B4 93 216 -76 1 928 195 42 0 0 chr13 45085696 45085720 -75198592 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 928 543 272 182 68 chr13 45085791 45086279 -75198033 + L1M4c LINE L1 29 572 -5812 1 928 237 175 212 45 chr13 45086368 45086434 -75197878 + B1_Mus2 SINE Alu 66 142 -5 1 928 685 266 58 42 chr13 45086438 45086878 -75197434 - L1M4 LINE L1 -813 5520 5079 1 928 683 250 33 22 chr13 45086936 45087120 -75197192 + ID_B1 SINE B4 26 211 -13 1 928 239 0 32 0 chr13 45087123 45087154 -75197158 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 928 1144 116 20 36 chr13 45087554 45087750 -75196562 + B2_Mm2 SINE B2 1 193 -2 1 928 624 233 47 17 chr13 45087755 45087921 -75196391 + B3 SINE B2 33 198 0 1 928 557 256 22 8 chr13 45087942 45088076 -75196236 + B3A SINE B2 37 172 -26 1 929 914 234 39 111 chr13 45090068 45090510 -75193802 + RMER17C LTR ERVK 1 410 0 1 929 252 0 0 0 chr13 45090520 45090548 -75193764 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1 929 778 181 27 27 chr13 45090591 45090739 -75193573 - B1_Mur2 SINE Alu -1 148 1 1 929 23 0 0 0 chr13 45090776 45090799 -75193513 + AT_rich Low_complexity Low_complexity 1 23 0 1 929 746 259 48 48 chr13 45091219 45091470 -75192842 + B4A SINE B4 42 292 0 1 929 189 94 0 0 chr13 45092162 45092194 -75192118 + (GA)n Simple_repeat Simple_repeat 2 33 0 1 929 21 0 0 0 chr13 45093071 45093092 -75191220 + GC_rich Low_complexity Low_complexity 1 21 0 1 929 226 215 91 15 chr13 45093439 45093505 -75190807 + ID4_ SINE ID 4 74 -9 1 929 1208 99 11 16 chr13 45093888 45094073 -75190239 + B2_Mm2 SINE B2 2 185 -10 1 929 323 262 56 0 chr13 45094503 45094610 -75189702 - RMER15 LTR ERVL -58 517 405 1 929 867 191 75 0 chr13 45094938 45095126 -75189186 + B3 SINE B2 1 202 -14 1 929 241 292 25 58 chr13 45096369 45096489 -75187823 + PB1D7 SINE Alu 5 120 0 1 929 238 265 29 10 chr13 45097396 45097499 -75186813 + C-rich Low_complexity Low_complexity 4 108 0 1 929 220 204 0 0 chr13 45098201 45098245 -75186067 - ID4_ SINE ID -38 45 2 1 929 315 0 0 0 chr13 45099095 45099130 -75185182 + (TTA)n Simple_repeat Simple_repeat 1 35 0 1 929 506 270 51 59 chr13 45099161 45099424 -75184888 + MTEa LTR MaLR 95 379 0 1 929 1141 123 45 0 chr13 45099881 45100060 -75184252 - B2_Mm1t SINE B2 -6 187 1 1 929 289 295 176 52 chr13 45100091 45100227 -75184085 + RSINE1 SINE B4 3 155 -10 1 929 331 217 36 12 chr13 45100568 45100652 -75183660 + MER5A DNA MER1_type 21 106 -83 1 929 768 52 0 0 chr13 45100867 45100964 -75183348 + (TC)n Simple_repeat Simple_repeat 2 98 0 1 929 1247 28 0 0 chr13 45100964 45101109 -75183203 - B1_Mus2 SINE Alu -1 146 2 1 929 566 235 11 250 chr13 45101917 45102201 -75182111 + B3 SINE B2 1 216 0 1 929 23 33 0 0 chr13 45102228 45102258 -75182054 + AT_rich Low_complexity Low_complexity 1 30 0 1 929 4701 96 80 14 chr13 45102510 45103269 -75181043 - RMER17D2 LTR ERVK 0 809 1 1 929 233 281 31 0 chr13 45103644 45103708 -75180604 + B3 SINE B2 71 136 -80 1 929 363 245 59 39 chr13 45103722 45103824 -75180488 + B3 SINE B2 113 216 0 1 929 1196 200 109 92 chr13 45104951 45105002 -75179310 - MTE2b LTR MaLR -13 366 314 1 929 240 35 0 0 chr13 45105002 45105031 -75179281 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 1 929 1196 200 109 92 chr13 45105031 45105337 -75178975 - MTE2b LTR MaLR -66 313 3 1 929 527 185 43 71 chr13 45106228 45106368 -75177944 + B1_Mur2 SINE Alu 14 149 0 1 929 378 0 0 0 chr13 45106371 45106413 -75177899 + (GGAA)n Simple_repeat Simple_repeat 3 44 0 1 929 3136 8 43 0 chr13 45106521 45106873 -75177439 + IAPLTR1_Mm LTR ERVK 1 367 0 1 929 51507 20 11 2 chr13 45106873 45113254 -75171058 + IAPEz-int LTR ERVK 8 6481 0 1 929 3136 8 43 0 chr13 45113254 45113606 -75170706 + IAPLTR1_Mm LTR ERVK 1 367 0 1 929 578 287 45 0 chr13 45114455 45114612 -75169700 + B3A SINE B2 2 165 -33 1 929 453 110 0 0 chr13 45114615 45114688 -75169624 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 929 21 0 0 0 chr13 45114691 45114712 -75169600 + AT_rich Low_complexity Low_complexity 1 21 0 1 929 2084 100 0 59 chr13 45114855 45115194 -75169118 - ORR1A2 LTR MaLR -8 319 1 1 929 261 0 0 0 chr13 45115588 45115617 -75168695 + (A)n Simple_repeat Simple_repeat 1 29 0 1 929 1432 75 21 0 chr13 45115804 45115992 -75168320 - B2_Mm1a SINE B2 -1 192 1 1 929 642 226 62 87 chr13 45116976 45117184 -75167128 - B3 SINE B2 -13 203 1 1 929 378 0 0 0 chr13 45117496 45117538 -75166774 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 929 416 274 11 0 chr13 45117538 45117633 -75166679 - PB1D10 SINE Alu -13 104 9 1 929 263 135 62 10 chr13 45118212 45118309 -75166003 + (TA)n Simple_repeat Simple_repeat 2 103 0 1 929 580 242 27 21 chr13 45118360 45118515 -75165797 + ID_B1 SINE B4 82 240 -52 1 929 811 234 47 11 chr13 45118510 45118700 -75165612 + B3 SINE B2 17 213 -3 1 929 234 313 88 75 chr13 45118941 45119100 -75165212 + MIRb SINE MIR 3 163 -105 1 929 240 35 0 0 chr13 45119953 45119982 -75164330 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1 929 555 213 6 22 chr13 45120743 45120921 -75163391 + (CA)n Simple_repeat Simple_repeat 2 176 0 1 929 246 122 0 0 chr13 45120933 45120974 -75163338 - RMER15 LTR ERVL -433 142 102 1 929 772 212 110 11 chr13 45121088 45121279 -75163033 + B3 SINE B2 6 215 -1 1 929 733 238 59 10 chr13 45121332 45121536 -75162776 - B3 SINE B2 -1 215 2 1 929 685 118 29 0 chr13 45121620 45121722 -75162590 - U6 snRNA snRNA 0 107 3 2 929 220 235 59 0 chr13 45121759 45121810 -75162502 - PB1D10 SINE Alu -5 112 59 2 929 383 227 87 124 chr13 45121780 45121941 -75162371 - ID_B1 SINE B4 -55 169 15 2 929 201 74 0 0 chr13 45121998 45122025 -75162287 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 929 2192 86 44 16 chr13 45122133 45122451 -75161861 - ORR1A2 LTR MaLR 0 327 1 2 929 629 155 88 52 chr13 45122646 45122782 -75161530 - B1_Mur2 SINE Alu -8 141 1 2 929 477 0 0 0 chr13 45122882 45122935 -75161377 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 929 7569 15 1 0 chr13 45123075 45123927 -75160385 + L1Md_T LINE L1 4734 5586 -297 2 929 8510 26 7 2 chr13 45123927 45124906 -75159406 + L1Md_T LINE L1 5587 6570 -12 2 929 919 64 254 14 chr13 45124920 45125062 -75159250 + B2_Mm2 SINE B2 1 176 -19 2 929 606 83 0 0 chr13 45125062 45125146 -75159166 - B2_Mm2 SINE B2 -109 86 3 2 929 490 289 69 53 chr13 45125170 45125415 -75158897 - L1M4 LINE L1 -429 5745 5497 2 929 3452 35 0 15 chr13 45125543 45125954 -75158358 - MTB_Mm LTR MaLR -2 405 1 2 929 183 129 0 0 chr13 45127099 45127130 -75157182 + (T)n Simple_repeat Simple_repeat 1 31 0 2 929 299 268 33 67 chr13 45127132 45127252 -75157060 - B1F SINE Alu 0 149 34 2 929 237 271 94 0 chr13 45127484 45127569 -75156743 + MER53 DNA hAT 31 123 -70 2 929 198 0 0 0 chr13 45127684 45127706 -75156606 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 929 243 146 0 0 chr13 45127758 45127813 -75156499 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 929 446 247 76 19 chr13 45127834 45127991 -75156321 - B4A SINE B4 0 292 127 2 929 268 302 94 0 chr13 45128303 45128399 -75155913 - ORR1E LTR MaLR 0 359 255 2 929 246 297 88 10 chr13 45128509 45128611 -75155701 + PB1 SINE Alu 7 116 -11 2 929 504 45 0 0 chr13 45128612 45128679 -75155633 + (CA)n Simple_repeat Simple_repeat 1 67 0 2 929 480 253 150 38 chr13 45129207 45129474 -75154838 + RLTR28B LTR ERVL 3 299 -182 2 929 743 200 0 0 chr13 45129672 45129797 -75154515 + RSINE1 SINE B4 11 135 -30 2 929 1256 83 44 11 chr13 45129978 45130160 -75154152 + B2_Mm2 SINE B2 2 189 -6 2 929 323 302 28 98 chr13 45130733 45130876 -75153436 - RSINE1 SINE B4 -32 133 1 2 929 218 186 0 0 chr13 45130906 45130949 -75153363 + ID_B1 SINE B4 90 132 -92 2 929 870 239 53 14 chr13 45131016 45131224 -75153088 + B3 SINE B2 1 216 0 2 929 201 239 0 0 chr13 45131740 45131786 -75152526 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 929 475 320 22 32 chr13 45131799 45132077 -75152235 - B4A SINE B4 -15 277 3 2 929 229 321 13 13 chr13 45132091 45132170 -75152142 - ID4_ SINE ID -2 81 3 2 929 373 264 9 18 chr13 45132174 45132286 -75152026 - PB1D10 SINE Alu 0 117 7 2 929 534 292 15 0 chr13 45132542 45132679 -75151633 + RSINE1 SINE B4 3 141 -24 2 929 583 50 40 10 chr13 45132713 45132814 -75151498 + (CA)n Simple_repeat Simple_repeat 2 105 0 2 929 659 240 8 0 chr13 45133540 45133665 -75150647 - B1_Mur1 SINE Alu -9 140 15 2 929 669 194 0 0 chr13 45133693 45133858 -75150454 + (TG)n Simple_repeat Simple_repeat 1 165 0 2 929 885 197 0 0 chr13 45133880 45134420 -75149892 + (TG)n Simple_repeat Simple_repeat 1 540 0 2 929 252 222 65 22 chr13 45134500 45134592 -75149720 - RSINE1 SINE B4 -36 129 34 2 929 428 273 10 0 chr13 45134602 45134701 -75149611 - ORR1E LTR MaLR -256 103 4 2 929 372 172 34 161 chr13 45134961 45135079 -75149233 - B1_Mus2 SINE Alu -44 103 1 2 929 214 250 0 0 chr13 45135041 45135085 -75149227 - B4 SINE B4 -169 123 80 2 929 592 129 64 4 chr13 45135096 45135228 -75149084 - B1_Mus2 SINE Alu -4 146 9 2 929 354 227 48 40 chr13 45135118 45135242 -75149070 - ID_B1 SINE B4 -21 203 79 2 929 320 295 89 45 chr13 45135393 45135533 -75148779 - MER33 DNA MER1_type -94 230 83 2 929 1146 236 91 20 chr13 45135533 45135874 -75148438 + ORR1D2 LTR MaLR 2 366 -4 2 929 320 295 89 45 chr13 45135874 45135935 -75148377 - MER33 DNA MER1_type -242 82 20 2 929 808 294 48 24 chr13 45136094 45136387 -75147925 - L1M5 LINE L1 -403 5776 5477 2 929 290 227 56 11 chr13 45136399 45136488 -75147824 - RSINE1 SINE B4 0 165 73 2 929 189 74 0 0 chr13 45136503 45136530 -75147782 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 929 241 208 153 8 chr13 45136724 45136848 -75147464 - L1MC LINE L1 -908 5238 5088 2 929 21 57 0 0 chr13 45136849 45136884 -75147428 + AT_rich Low_complexity Low_complexity 1 35 0 2 929 285 244 82 0 chr13 45137072 45137173 -75147139 - RSINE1 SINE B4 -2 163 78 2 929 226 299 0 95 chr13 45137187 45137225 -75147087 + RSINE1 SINE B4 22 59 -106 2 929 1679 149 38 28 chr13 45137225 45137542 -75146770 + RLTR46 LTR ERVK 1 320 0 2 929 226 299 0 95 chr13 45137542 45137577 -75146735 + RSINE1 SINE B4 60 88 -77 2 929 2283 185 12 9 chr13 45137627 45138047 -75146265 - MTC LTR MaLR 0 421 1 2 929 216 0 0 0 chr13 45138085 45138109 -75146203 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 929 772 206 0 7 chr13 45138141 45138283 -75146029 + B1_Mur1 SINE Alu 7 147 -2 2 929 763 169 49 1 chr13 45138286 45138351 -75145961 + L1MEf LINE L1 2192 2259 -3887 2 929 2528 71 3 58 chr13 45138351 45138697 -75145615 - ORR1A2 LTR MaLR 0 327 1 2 929 763 217 21 11 chr13 45138697 45138823 -75145489 + L1MEf LINE L1 2260 2385 -3761 2 929 678 288 17 51 chr13 45138855 45139089 -75145223 + Lx9 LINE L1 6945 7170 -474 2 929 339 224 0 133 chr13 45139113 45139211 -75145101 + RMER1C Other Other 1246 1330 -12 2 929 489 265 24 44 chr13 45139226 45139431 -75144881 + L1MEf LINE L1 2387 2587 -3559 2 929 668 323 99 61 chr13 45139477 45139869 -75144443 - Charlie1a DNA MER1_type -1041 414 8 2 929 540 0 0 0 chr13 45139911 45139971 -75144341 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 929 315 0 0 0 chr13 45139971 45140005 -75144307 + (GA)n Simple_repeat Simple_repeat 2 36 0 2 929 219 69 0 0 chr13 45140511 45140540 -75143772 + (CAAG)n Simple_repeat Simple_repeat 2 30 0 2 929 2055 235 119 97 chr13 45140812 45140936 -75143376 - Lx6 LINE L1 -27 7433 7323 2 929 381 22 0 0 chr13 45140936 45140982 -75143330 + (CAAAC)n Simple_repeat Simple_repeat 2 47 0 2 929 2055 235 119 97 chr13 45140982 45141520 -75142792 - Lx6 LINE L1 -138 7322 6756 2 929 291 250 137 44 chr13 45141580 45141785 -75142527 + L2 LINE L2 2785 3008 -411 2 929 210 71 0 0 chr13 45141948 45141976 -75142336 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2 929 295 320 90 19 chr13 45142072 45142236 -75142076 - MTE2b LTR MaLR -7 372 204 2 929 630 234 78 46 chr13 45142458 45142677 -75141635 + MLT1C LTR MaLR 3 228 -239 2 929 418 284 9 0 chr13 45142688 45142797 -75141515 + B1_Mur1 SINE Alu 26 135 -14 2 929 259 154 31 0 chr13 45142797 45142862 -75141450 + GA-rich Low_complexity Low_complexity 3 69 0 2 929 588 301 27 59 chr13 45142863 45143085 -75141227 + MLT1C LTR MaLR 220 434 -33 2 929 441 279 16 11 chr13 45143080 45143194 -75141118 + ID_B1 SINE B4 10 120 -172 2 929 376 233 105 0 chr13 45143913 45143999 -75140313 + ID_B1 SINE B4 97 191 -33 2 929 831 198 0 0 chr13 45144005 45144478 -75139834 + (CAA)n Simple_repeat Simple_repeat 1 473 0 2 929 246 105 0 0 chr13 45145612 45145650 -75138662 + (ATTG)n Simple_repeat Simple_repeat 1 38 0 2 929 189 0 0 0 chr13 45145830 45145851 -75138461 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 2 929 756 216 0 7 chr13 45146017 45146152 -75138160 + RSINE1 SINE B4 2 135 -30 2 929 456 19 0 0 chr13 45146189 45146242 -75138070 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 929 1274 294 101 35 chr13 45146547 45147171 -75137141 - Lx8 LINE L1 -89 7384 6720 2 929 276 30 0 0 chr13 45147403 45147436 -75136876 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 929 243 215 25 25 chr13 45147572 45147653 -75136659 - L1M5 LINE L1 -724 5470 5390 2 929 761 165 6 23 chr13 45148725 45149240 -75135072 + (TG)n Simple_repeat Simple_repeat 1 506 0 2 929 349 247 144 46 chr13 45149240 45149263 -75135049 - B4 SINE B4 0 292 271 2 929 369 0 0 0 chr13 45149263 45149304 -75135008 + (GA)n Simple_repeat Simple_repeat 1 41 0 2 929 349 247 144 46 chr13 45149304 45149433 -75134879 - B4 SINE B4 -22 270 125 2 929 938 152 23 12 chr13 45149678 45149851 -75134461 + ORR1C2 LTR MaLR 210 384 0 2 929 195 288 34 0 chr13 45150091 45150150 -75134162 - MIR3 SINE MIR -11 197 137 2 929 232 206 14 87 chr13 45150261 45150330 -75133982 + ID_B1 SINE B4 105 168 -56 2 929 427 31 47 0 chr13 45150370 45150434 -75133878 + (TCTA)n Simple_repeat Simple_repeat 3 69 0 2 929 423 0 0 0 chr13 45150505 45150552 -75133760 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 929 252 0 0 0 chr13 45150961 45150989 -75133323 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 2 929 960 224 103 124 chr13 45151604 45151991 -75132321 - MTE2a LTR MaLR 0 379 1 2 929 337 231 0 37 chr13 45152121 45152202 -75132110 + ID_B1 SINE B4 105 182 -42 2 929 459 0 0 0 chr13 45152219 45152270 -75132042 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 929 226 224 194 0 chr13 45152283 45152350 -75131962 + ID4_ SINE ID 3 82 -1 2 929 387 0 0 0 chr13 45152370 45152413 -75131899 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 929 334 288 128 12 chr13 45152670 45152842 -75131470 - RMER15 LTR ERVL -3 572 381 2 929 209 33 33 0 chr13 45153582 45153612 -75130700 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 929 379 302 97 53 chr13 45155308 45155421 -75128891 + L1MC1 LINE L1 5028 5154 -992 2 929 1154 129 38 0 chr13 45155421 45155607 -75128705 + Lx2 LINE L1 6801 6993 -4 2 929 879 293 119 67 chr13 45155607 45155918 -75128394 + L1MC1 LINE L1 5155 5431 -902 2 929 544 303 37 0 chr13 45155918 45155931 -75128381 - B3A SINE B2 -1 197 185 2 929 492 18 0 0 chr13 45155931 45155988 -75128324 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 929 544 303 37 0 chr13 45155988 45156162 -75128150 - B3A SINE B2 -14 184 4 2 929 879 288 129 73 chr13 45156162 45156734 -75127578 + L1MC1 LINE L1 5432 6084 -249 2 929 8272 27 0 3 chr13 45156734 45157666 -75126646 + RLTR13B3 LTR ERVK 1 929 0 2 929 276 265 0 22 chr13 45157943 45158082 -75126230 + C-rich Low_complexity Low_complexity 3 138 0 2 929 558 198 0 0 chr13 45158210 45158367 -75125945 + (CA)n Simple_repeat Simple_repeat 2 158 0 3 929 536 206 0 11 chr13 45158417 45158599 -75125713 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 929 740 281 73 14 chr13 45159301 45159576 -75124736 - B4 SINE B4 0 292 2 3 929 5379 72 20 4 chr13 45159586 45160294 -75124018 + L1Md_F2 LINE L1 5864 6582 0 3 929 1514 205 39 26 chr13 45160373 45160754 -75123558 + ORR1B1 LTR MaLR 1 386 -8 3 929 718 274 36 60 chr13 45161030 45161213 -75123099 + B4A SINE B4 26 210 -82 3 929 3047 64 8 8 chr13 45161213 45161608 -75122704 + MTA_Mm LTR MaLR 1 395 -1 3 929 718 274 36 60 chr13 45161608 45161676 -75122636 + B4A SINE B4 211 271 -21 3 929 193 349 35 44 chr13 45162152 45162266 -75122046 + MIR SINE MIR 38 150 -112 3 929 3260 51 5 2 chr13 45162502 45162897 -75121415 - MTA_Mm LTR MaLR 0 396 1 3 929 369 0 0 0 chr13 45163033 45163074 -75121238 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 929 432 0 0 0 chr13 45163074 45163121 -75121191 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 929 324 0 0 0 chr13 45163323 45163359 -75120953 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 929 260 248 116 92 chr13 45163738 45163902 -75120410 + MER53 DNA hAT 21 188 -5 3 929 801 250 5 39 chr13 45164194 45164398 -75119914 - B3A SINE B2 0 198 2 3 929 638 205 78 20 chr13 45164488 45164692 -75119620 - L1_Rod LINE L1 -4054 1793 1578 3 929 953 235 94 53 chr13 45164773 45165087 -75119225 - L1_Rod LINE L1 -4392 1455 1116 3 929 276 100 0 0 chr13 45165087 45165127 -75119185 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 929 953 246 72 100 chr13 45165127 45165397 -75118915 - L1_Rod LINE L1 -6493 1115 881 3 929 769 232 165 0 chr13 45165613 45165880 -75118432 + L1MC4a LINE L1 6922 7232 -650 3 929 453 326 56 10 chr13 45165880 45166075 -75118237 + B3 SINE B2 7 210 -6 3 929 1206 294 50 13 chr13 45167261 45167736 -75116576 + L1MC4a LINE L1 7268 7760 -122 3 929 264 208 89 38 chr13 45167764 45167869 -75116443 - B4 SINE B4 -14 278 83 3 929 487 281 14 7 chr13 45168044 45168184 -75116128 - ID_B1 SINE B4 0 224 84 3 929 2619 149 12 48 chr13 45168209 45168724 -75115588 + L1_Mur3 LINE L1 2715 3210 -2670 3 929 1825 206 94 27 chr13 45168724 45169156 -75115156 + RCHARR1 DNA MER1_type 382 852 -122 3 929 775 260 48 10 chr13 45169156 45169362 -75114950 + B3 SINE B2 1 214 -2 3 929 1825 206 94 27 chr13 45169362 45169450 -75114862 + RCHARR1 DNA MER1_type 853 937 -37 3 929 877 227 19 76 chr13 45169450 45169660 -75114652 + B3A SINE B2 1 198 0 3 929 257 198 0 44 chr13 45169994 45170084 -75114228 + CT-rich Low_complexity Low_complexity 1 86 0 3 929 642 263 148 33 chr13 45170122 45170366 -75113946 + B4 SINE B4 4 275 -17 3 929 368 271 93 0 chr13 45170508 45170637 -75113675 - MLT2F LTR ERVL -517 146 6 3 929 308 253 88 32 chr13 45170785 45170951 -75113361 - LTR16B1 LTR ERVL -6 474 264 3 929 254 267 96 3 chr13 45171785 45171878 -75112434 + B3 SINE B2 41 138 -60 3 929 435 92 0 0 chr13 45171878 45171943 -75112369 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 929 219 167 0 0 chr13 45172185 45172227 -75112085 + (CATA)n Simple_repeat Simple_repeat 2 43 0 3 929 201 121 0 0 chr13 45172231 45172264 -75112048 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 3 929 21 0 0 0 chr13 45172536 45172557 -75111755 + AT_rich Low_complexity Low_complexity 1 21 0 3 929 902 143 0 21 chr13 45172637 45172780 -75111532 + B1_Mur3 SINE Alu 1 140 -9 3 929 312 27 0 0 chr13 45172780 45172817 -75111495 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 929 205 161 0 0 chr13 45173038 45173069 -75111243 + polypurine Low_complexity Low_complexity 2 32 0 3 929 641 278 128 4 chr13 45173460 45173702 -75110610 - MTD LTR MaLR -80 339 68 3 929 291 54 0 0 chr13 45173702 45173739 -75110573 + (T)n Simple_repeat Simple_repeat 1 37 0 3 929 652 279 134 81 chr13 45174832 45175167 -75109145 - ORR1E LTR MaLR -5 354 2 3 929 515 229 51 56 chr13 45175168 45175501 -75108811 + MLT1B LTR MaLR 144 489 -16 3 929 230 380 25 0 chr13 45175692 45175813 -75108499 - MIRb SINE MIR -28 240 117 3 929 631 267 79 108 chr13 45175872 45176026 -75108286 - ORR1E LTR MaLR -9 350 224 3 929 1423 68 5 16 chr13 45176026 45176220 -75108092 - B2_Mm1a SINE B2 0 193 2 3 929 631 267 79 108 chr13 45176220 45176418 -75107894 - ORR1E LTR MaLR -136 223 9 3 929 1462 224 54 12 chr13 45176597 45176932 -75107380 - MTE2b LTR MaLR -4 375 27 3 929 279 0 0 0 chr13 45176965 45176996 -75107316 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 929 264 171 53 0 chr13 45177001 45177077 -75107235 + (TA)n Simple_repeat Simple_repeat 2 81 0 3 929 733 233 174 23 chr13 45177193 45177545 -75106767 - Lx8 LINE L1 0 7473 7069 3 929 399 268 11 79 chr13 45177546 45177631 -75106681 - MER53 DNA hAT -27 166 88 3 929 2060 142 76 8 chr13 45177631 45178000 -75106312 - ORR1B1 LTR MaLR 0 394 1 3 929 399 268 11 79 chr13 45178000 45178092 -75106220 - MER53 DNA hAT -106 87 1 3 929 340 252 33 90 chr13 45178161 45178283 -75106029 - PB1 SINE Alu -12 115 1 3 929 278 266 80 95 chr13 45180185 45180322 -75103990 + MTD LTR MaLR 10 144 -275 3 929 1514 205 54 27 chr13 45180329 45180770 -75103542 + RLTR20B3 LTR ERVK 9 461 -116 3 929 316 291 33 83 chr13 45181189 45181309 -75103003 - PB1D7 SINE Alu -6 114 1 3 929 396 102 20 0 chr13 45181315 45181414 -75102898 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 3 929 1814 147 79 89 chr13 45181458 45181875 -75102437 + MTC LTR MaLR 1 413 -8 3 929 5569 161 106 33 chr13 45181878 45183050 -75101262 + MTC-int LTR MaLR 2 1258 0 3 929 2256 152 62 12 chr13 45183050 45183451 -75100861 + MTC LTR MaLR 1 421 0 3 929 364 277 69 0 chr13 45183454 45183555 -75100757 - RSINE1 SINE B4 -42 123 16 3 929 242 324 81 27 chr13 45183569 45183680 -75100632 - ID_B1 SINE B4 -5 219 103 3 929 682 277 24 28 chr13 45183943 45184108 -75100204 - B3 SINE B2 -5 211 46 3 929 189 0 0 0 chr13 45184108 45184129 -75100183 + (C)n Simple_repeat Simple_repeat 1 21 0 3 929 682 277 24 28 chr13 45184129 45184175 -75100137 - B3 SINE B2 -171 45 1 3 929 289 236 14 14 chr13 45184177 45184250 -75100062 - RSINE1 SINE B4 -1 164 92 3 929 456 255 0 10 chr13 45184766 45184865 -75099447 - RSINE1 SINE B4 -66 99 2 3 929 243 341 65 39 chr13 45186132 45186257 -75098055 + MIRb SINE MIR 24 152 -116 3 929 477 0 0 0 chr13 45186257 45186310 -75098002 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 929 243 341 65 39 chr13 45186310 45186413 -75097899 + MIRb SINE MIR 153 258 -10 3 929 2408 78 133 5 chr13 45186717 45187114 -75097198 - RLTR44D LTR ERVK -9 477 30 3 929 382 281 231 3 chr13 45188042 45188347 -75095965 + L2a LINE L2 2825 3184 -242 3 929 819 273 78 19 chr13 45189989 45190247 -75094065 - B4A SINE B4 -18 274 2 3 929 375 362 100 31 chr13 45190421 45190740 -75093572 - MLT1D LTR MaLR -144 361 21 3 929 278 284 95 0 chr13 45191073 45191147 -75093165 - ID4_ SINE ID -1 82 2 3 929 379 272 58 0 chr13 45191187 45191290 -75093022 - PB1D9 SINE Alu -8 112 4 3 929 207 0 0 0 chr13 45191941 45191964 -75092348 + (T)n Simple_repeat Simple_repeat 1 23 0 3 929 917 315 14 7 chr13 45192690 45192978 -75091334 - B4A SINE B4 -2 290 1 3 929 3064 23 3 0 chr13 45193165 45193510 -75090802 - ORR1A0 LTR MaLR 0 346 1 3 929 312 301 80 0 chr13 45194137 45194250 -75090062 - MIRb SINE MIR -76 192 71 3 929 183 80 0 0 chr13 45194640 45194665 -75089647 + (TTA)n Simple_repeat Simple_repeat 2 26 0 3 929 235 292 110 12 chr13 45195760 45195923 -75088389 + ORR1E LTR MaLR 75 253 -106 3 929 422 234 136 25 chr13 45196512 45196674 -75087638 - B3A SINE B2 -16 182 3 3 929 248 91 0 22 chr13 45196738 45196783 -75087529 + (CAA)n Simple_repeat Simple_repeat 3 46 0 3 929 267 273 40 10 chr13 45196971 45197071 -75087241 + CT-rich Low_complexity Low_complexity 3 105 0 3 929 300 162 150 17 chr13 45197333 45197467 -75086845 - MTE2a LTR MaLR -2 377 207 3 929 293 320 40 0 chr13 45197590 45197690 -75086622 + MER81 DNA AcHobo 8 111 -3 3 929 669 278 100 27 chr13 45198956 45199326 -75084986 + L1M2 LINE L1 1488 1884 -4965 3 929 552 229 57 0 chr13 45199489 45199611 -75084701 + RSINE1 SINE B4 1 129 -36 3 929 642 344 49 3 chr13 45199611 45199917 -75084395 + L1M2 LINE L1 3236 3555 -3290 3 929 312 285 118 19 chr13 45202282 45202443 -75081869 + MLT1C LTR MaLR 288 464 -3 3 929 480 330 56 11 chr13 45202697 45202875 -75081437 - B3A SINE B2 -4 194 9 3 929 452 226 165 19 chr13 45202946 45203094 -75081218 - ID_B1 SINE B4 -75 217 48 3 929 197 387 0 0 chr13 45203512 45203574 -75080738 + L2 LINE L2 2685 2746 -673 3 929 263 323 101 35 chr13 45203584 45203783 -75080529 - RMER15 LTR ERVL -11 564 353 3 929 2219 195 10 43 chr13 45204681 45205191 -75079121 + RMER5 LTR ERV1 15 507 -27 3 929 286 219 170 9 chr13 45205202 45205308 -75079004 - MLT1A0 LTR MaLR -209 156 34 3 929 278 321 22 14 chr13 45206150 45206289 -75078023 + (TG)n Simple_repeat Simple_repeat 2 141 0 3 929 885 314 22 0 chr13 45206290 45206564 -75077748 - B4A SINE B4 0 292 13 3 929 2197 138 87 10 chr13 45206607 45207011 -75077301 - RMER20A LTR ERVK -81 435 1 3 929 586 252 143 56 chr13 45207192 45207478 -75076834 + L1MA8 LINE L1 5620 5930 -361 3 929 225 310 142 0 chr13 45207917 45208030 -75076282 - MER5B DNA MER1_type -3 175 47 3 929 719 232 6 6 chr13 45208475 45208631 -75075681 + B3A SINE B2 1 156 -42 3 929 405 0 0 0 chr13 45208651 45208696 -75075616 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 929 207 0 0 0 chr13 45208719 45208742 -75075570 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 929 284 82 26 40 chr13 45209250 45209326 -75074986 + (CAAAAA)n Simple_repeat Simple_repeat 2 76 0 3 929 2327 165 34 12 chr13 45209839 45210251 -75074061 + MTC LTR MaLR 1 421 0 3 929 417 129 0 0 chr13 45210939 45211009 -75073303 + (CATA)n Simple_repeat Simple_repeat 2 71 0 3 929 923 306 39 9 chr13 45211208 45211541 -75072771 + MLT2B4 LTR ERVL 2 344 -212 3 929 432 211 44 35 chr13 45211740 45211853 -75072459 + B1_Mur2 SINE Alu 1 114 -35 3 929 427 200 99 78 chr13 45212057 45212198 -75072114 + MLT2B4 LTR ERVL 411 554 -2 3 929 438 191 43 9 chr13 45212270 45212386 -75071926 - MER53 DNA hAT -73 120 1 4 929 264 302 57 51 chr13 45212394 45212551 -75071761 - MLT1J LTR MaLR -323 189 32 4 929 227 29 0 54 chr13 45212882 45212919 -75071393 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 929 552 340 59 56 chr13 45212983 45213307 -75071005 + MLT1B LTR MaLR 1 325 -65 4 929 484 347 56 72 chr13 45213485 45213805 -75070507 - ORR1E LTR MaLR -2 357 43 4 929 431 303 36 0 chr13 45215113 45215278 -75069034 - Tigger7 DNA MER2_type -1 2490 2320 4 929 547 289 247 7 chr13 45215274 45215336 -75068976 - Tigger7 DNA MER2_type -2021 470 410 4 929 529 0 0 53 chr13 45215336 45215411 -75068901 + (TTTA)n Simple_repeat Simple_repeat 2 72 0 4 929 547 289 247 7 chr13 45215411 45215648 -75068664 - Tigger7 DNA MER2_type -2082 409 100 4 929 264 180 112 6 chr13 45216141 45216250 -75068062 - MIR SINE MIR -63 205 87 4 929 213 0 81 0 chr13 45216266 45216303 -75068009 + (TTTTG)n Simple_repeat Simple_repeat 4 43 0 4 929 36694 52 3 5 chr13 45216305 45219595 -75064717 - L1Md_F2 LINE L1 -14 6568 3275 4 929 1514 78 0 0 chr13 45219595 45219788 -75064524 - B2_Mm2 SINE B2 -1 194 2 4 116 36694 85 4 13 chr13 45219788 45222630 -75061682 - L1Md_F2 LINE L1 -2609 3274 481 4 930 447 92 0 0 chr13 45222736 45222801 -75061511 + (TCCA)n Simple_repeat Simple_repeat 1 65 0 4 930 1035 101 18 0 chr13 45223636 45223804 -75060508 + (TCTCC)n Simple_repeat Simple_repeat 1 171 0 4 930 221 232 42 0 chr13 45223809 45223904 -75060408 + CT-rich Low_complexity Low_complexity 1 99 0 4 930 303 276 0 38 chr13 45223970 45224049 -75060263 + B1F1 SINE Alu 7 83 -66 4 930 225 0 0 0 chr13 45224049 45224074 -75060238 + (T)n Simple_repeat Simple_repeat 1 25 0 4 930 1071 79 71 35 chr13 45224144 45224314 -75059998 + B2_Mm2 SINE B2 1 176 -19 4 930 891 152 97 32 chr13 45224417 45224693 -75059619 + RMER6B LTR ERVK 69 418 -43 4 930 314 233 111 0 chr13 45224742 45224832 -75059480 - MER5A DNA MER1_type -57 132 33 4 930 210 143 0 0 chr13 45225743 45225778 -75058534 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 4 930 306 50 0 0 chr13 45226374 45226414 -75057898 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 930 251 96 26 40 chr13 45226522 45226598 -75057714 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 4 930 1131 62 13 20 chr13 45226598 45226747 -75057565 - B1_Mus1 SINE Alu 0 148 1 4 930 228 339 0 0 chr13 45226748 45226807 -75057505 - LTR50 LTR ERVL -715 80 22 4 930 365 225 12 12 chr13 45227026 45227107 -75057205 + ID4_ SINE ID 1 81 -2 4 930 206 121 0 0 chr13 45227107 45227140 -75057172 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 4 930 616 112 22 22 chr13 45227140 45227277 -75057035 + GA-rich Low_complexity Low_complexity 3 139 0 4 930 340 265 20 0 chr13 45227690 45227788 -75056524 + B3A SINE B2 3 102 -96 4 930 410 257 18 9 chr13 45227816 45227930 -75056382 + B3A SINE B2 63 177 -21 4 930 549 44 0 0 chr13 45227943 45228011 -75056301 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 930 378 0 0 0 chr13 45228061 45228103 -75056209 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 930 555 16 0 0 chr13 45228105 45228169 -75056143 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 930 274 333 58 50 chr13 45228171 45228310 -75056002 - RSINE1 SINE B4 -22 143 4 4 930 528 274 8 0 chr13 45228508 45228632 -75055680 - PB1 SINE Alu -2 125 1 4 930 815 305 84 20 chr13 45229630 45229928 -75054384 - MTEa LTR MaLR -2 377 61 4 930 221 147 0 0 chr13 45229935 45229969 -75054343 - Alu SINE Alu -90 85 52 4 930 233 182 18 0 chr13 45229982 45230037 -75054275 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 4 930 581 214 58 44 chr13 45230058 45230195 -75054117 - B1_Mur2 SINE Alu -9 140 2 4 930 252 0 0 0 chr13 45230195 45230223 -75054089 + (A)n Simple_repeat Simple_repeat 1 28 0 4 930 646 298 66 33 chr13 45230547 45230951 -75053361 + RMER15 LTR ERVL 25 560 -15 4 930 565 258 6 63 chr13 45231171 45231345 -75052967 + RSINE1 SINE B4 2 165 0 4 930 318 152 0 0 chr13 45231369 45231428 -75052884 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 930 486 0 0 0 chr13 45231461 45231515 -75052797 + (TTTA)n Simple_repeat Simple_repeat 1 54 0 4 930 953 78 13 0 chr13 45231944 45232097 -75052215 + ORR1A4-int LTR MaLR 1718 1872 -91 4 930 573 99 0 11 chr13 45232165 45232257 -75052055 + ORR1A4-int LTR MaLR 1873 1963 0 4 930 2060 100 6 56 chr13 45232257 45232595 -75051717 + ORR1A4 LTR MaLR 1 321 -8 4 930 647 203 55 0 chr13 45232780 45232908 -75051404 - B1_Mur4 SINE Alu -13 137 3 4 930 280 238 44 114 chr13 45232812 45232926 -75051386 - MT2B LTR ERVL -344 257 152 4 930 484 240 39 49 chr13 45232928 45233110 -75051202 + MTE2a LTR MaLR 151 321 -58 4 930 2320 250 43 24 chr13 45233722 45234423 -75049889 - RCHARR1 DNA MER1_type -59 915 202 4 930 324 333 22 7 chr13 45234588 45234724 -75049588 - RCHARR1 DNA MER1_type -802 172 35 4 930 405 309 176 5 chr13 45234993 45235146 -75049166 - MLT1D LTR MaLR -11 494 336 4 930 189 0 0 0 chr13 45235146 45235167 -75049145 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 4 930 405 309 176 5 chr13 45235167 45235218 -75049094 - MLT1D LTR MaLR -170 335 257 4 930 204 197 48 16 chr13 45235575 45235637 -75048675 + T-rich Low_complexity Low_complexity 2 65 0 4 930 295 357 137 40 chr13 45236013 45236261 -75048051 + B4 SINE B4 3 274 -18 4 930 390 42 0 0 chr13 45236272 45236320 -75047992 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 930 369 176 2 0 chr13 45236786 45236859 -75047453 - PB1D9 SINE Alu -74 75 2 4 930 283 263 26 142 chr13 45236864 45237019 -75047293 - MLT1D LTR MaLR -167 198 62 4 930 444 91 0 0 chr13 45237105 45237171 -75047141 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 930 204 122 0 0 chr13 45237619 45237660 -75046652 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 930 519 268 67 53 chr13 45237955 45238164 -75046148 + MLT1D LTR MaLR 2 213 -292 4 930 11170 140 20 13 chr13 45238164 45240640 -75043672 + Lx LINE L1 4054 6566 0 4 930 348 24 0 0 chr13 45241074 45241115 -75043197 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 930 1239 21 7 0 chr13 45242345 45242488 -75041824 - B1_Mm SINE Alu -3 144 1 4 930 554 42 0 0 chr13 45243388 45243460 -75040852 - B1_Mus2 SINE Alu -75 72 1 4 930 856 274 29 0 chr13 45243480 45243684 -75040628 - B3 SINE B2 -6 210 1 4 930 321 305 67 83 chr13 45244046 45244094 -75040218 - B2_Mm2 SINE B2 -5 190 146 4 930 324 0 0 0 chr13 45244094 45244130 -75040182 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 930 591 265 9 2 chr13 45244130 45244274 -75040038 - B3A SINE B2 -50 145 1 4 930 2653 48 3 46 chr13 45245173 45245563 -75038749 + MTB LTR MaLR 28 400 0 4 930 290 189 0 75 chr13 45246500 45246580 -75037732 - MLT2B5 LTR ERVL -4 551 478 4 930 498 231 0 0 chr13 45246580 45246723 -75037589 + (TA)n Simple_repeat Simple_repeat 1 143 0 4 930 819 238 132 20 chr13 45246729 45247167 -75037145 - MT2B LTR ERVL -80 521 1 4 930 1300 100 26 0 chr13 45247190 45247380 -75036932 + B2_Mm2 SINE B2 1 195 0 4 930 21 0 0 0 chr13 45247791 45247812 -75036500 + AT_rich Low_complexity Low_complexity 1 21 0 4 930 391 211 13 13 chr13 45248246 45248323 -75035989 - ID4_ SINE ID -3 80 4 4 930 477 172 8 16 chr13 45249434 45249482 -75034830 + polypyrimidine Low_complexity Low_complexity 76 124 0 4 930 1001 133 0 11 chr13 45249482 45249664 -75034648 + (TCC)n Simple_repeat Simple_repeat 1 180 0 4 930 477 172 8 16 chr13 45249664 45249739 -75034573 + polypyrimidine Low_complexity Low_complexity 2 75 0 4 930 285 291 25 0 chr13 45249739 45249818 -75034494 - ID4_ SINE ID -1 82 2 4 930 579 226 0 8 chr13 45249829 45249963 -75034349 - ID_B1 SINE B4 0 224 92 4 930 401 276 86 8 chr13 45249979 45250107 -75034205 - B1F2 SINE Alu -11 138 1 4 930 390 286 31 0 chr13 45250506 45250604 -75033708 - MER21B LTR ERV1 -525 338 238 4 930 691 201 113 23 chr13 45250775 45251075 -75033237 - RMER17C LTR ERVK 0 410 84 4 930 811 203 60 8 chr13 45251089 45251323 -75032989 - RMER17C LTR ERVK -164 246 1 4 930 342 143 0 0 chr13 45251609 45251672 -75032640 + (A)n Simple_repeat Simple_repeat 1 63 0 4 930 398 241 13 0 chr13 45251706 45251785 -75032527 + Lx8 LINE L1 7242 7321 -152 4 930 292 324 0 0 chr13 45252149 45252223 -75032089 - ID4_ SINE ID -9 74 1 4 930 294 267 183 0 chr13 45253924 45254044 -75030268 + B1F SINE Alu 8 149 0 4 930 21 0 0 0 chr13 45255085 45255106 -75029206 + AT_rich Low_complexity Low_complexity 1 21 0 4 930 357 284 0 0 chr13 45256296 45256384 -75027928 + L2a LINE L2 3333 3420 -6 4 930 322 260 0 14 chr13 45256856 45256930 -75027382 + ID4_ SINE ID 2 74 -9 4 930 3788 146 126 37 chr13 45257007 45257858 -75026454 - RMER19B LTR ERVK -12 890 1 4 930 2057 171 22 3 chr13 45258252 45258616 -75025696 + ORR1C1 LTR MaLR 8 378 0 4 930 260 318 0 113 chr13 45259021 45259145 -75025167 + MER44A DNA MER2_type 4 113 -226 4 930 216 194 0 0 chr13 45259161 45259167 -75025145 + (CAGAGA)n Simple_repeat Simple_repeat 2 7 0 4 930 279 0 0 0 chr13 45259167 45259198 -75025114 + (TATATG)n Simple_repeat Simple_repeat 3 33 0 4 930 216 194 0 0 chr13 45259198 45259253 -75025059 + (CAGAGA)n Simple_repeat Simple_repeat 2 56 0 4 930 758 242 35 44 chr13 45259256 45259485 -75024827 + MER44A DNA MER2_type 103 330 -9 4 930 244 329 0 25 chr13 45260227 45260308 -75024004 + ID4_ SINE ID 2 80 -3 4 930 442 293 60 0 chr13 45260449 45260565 -75023747 + RSINE1 SINE B4 2 124 -41 4 930 402 21 0 0 chr13 45260598 45260645 -75023667 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 4 930 410 285 114 57 chr13 45260650 45260825 -75023487 - B3A SINE B2 -8 190 6 4 930 22 56 0 0 chr13 45261452 45261488 -75022824 + AT_rich Low_complexity Low_complexity 1 36 0 4 930 1915 160 28 11 chr13 45261743 45262096 -75022216 - ORR1B2 LTR MaLR -8 359 1 4 930 265 298 96 9 chr13 45262132 45262143 -75022169 + B1F SINE Alu 24 144 -1 4 930 363 250 50 0 chr13 45262143 45262243 -75022069 + ID_B1 SINE B4 115 219 -5 5 930 264 286 114 0 chr13 45262255 45262395 -75021917 + L1M5 LINE L1 5701 5856 -317 5 930 290 232 129 20 chr13 45262494 45262595 -75021717 - MTD LTR MaLR -307 112 1 5 930 23 0 0 0 chr13 45262600 45262623 -75021689 + AT_rich Low_complexity Low_complexity 1 23 0 5 930 747 283 110 29 chr13 45262749 45263115 -75021197 - MTD LTR MaLR -15 406 1 5 930 238 239 0 0 chr13 45263564 45263610 -75020702 + L3 LINE CR1 4429 4474 -15 5 930 2020 174 8 37 chr13 45264531 45264912 -75019400 - ORR1D1 LTR MaLR -4 370 1 5 930 297 270 20 20 chr13 45265349 45265451 -75018861 - Tigger7 DNA MER2_type -1428 1063 962 5 930 808 326 72 33 chr13 45265452 45265785 -75018527 - Tigger7 DNA MER2_type -2145 346 1 5 930 2538 120 86 0 chr13 45266600 45266984 -75017328 + MTC LTR MaLR 1 417 -4 5 930 2124 134 135 31 chr13 45267098 45267520 -75016792 - RMER4A LTR ERVK 0 466 1 5 930 306 241 55 94 chr13 45267559 45267687 -75016625 + RSINE1 SINE B4 3 125 -40 5 930 186 43 0 0 chr13 45267687 45267710 -75016602 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 930 469 254 65 7 chr13 45267816 45267955 -75016357 - B1F SINE Alu -1 148 2 5 930 414 254 82 67 chr13 45268231 45268366 -75015946 - RSINE1 SINE B4 0 165 29 5 930 22 0 0 0 chr13 45268384 45268406 -75015906 + AT_rich Low_complexity Low_complexity 1 22 0 5 930 278 270 84 35 chr13 45268581 45268723 -75015589 + MIRc SINE MIR 102 250 -18 5 930 234 0 0 0 chr13 45269321 45269347 -75014965 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 930 743 276 28 59 chr13 45269375 45269629 -75014683 - B4A SINE B4 -45 247 2 5 930 337 275 54 27 chr13 45269982 45270094 -75014218 + PB1D10 SINE Alu 1 115 -2 5 930 287 68 0 63 chr13 45270341 45270382 -75013930 + (TCCCC)n Simple_repeat Simple_repeat 3 41 0 5 930 1490 17 0 6 chr13 45270382 45270560 -75013752 + (TTC)n Simple_repeat Simple_repeat 3 179 0 5 930 287 68 0 63 chr13 45270560 45270581 -75013731 + (TCCCC)n Simple_repeat Simple_repeat 3 22 0 5 930 495 0 0 0 chr13 45271148 45271203 -75013109 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 5 930 701 295 0 15 chr13 45271203 45271392 -75012920 - B3A SINE B2 -11 187 1 5 930 1156 99 0 0 chr13 45271410 45271571 -75012741 - B2_Mm2 SINE B2 -34 161 1 5 930 468 0 0 0 chr13 45271575 45271627 -75012685 + (TTTTA)n Simple_repeat Simple_repeat 1 52 0 5 930 3152 210 40 14 chr13 45271957 45272656 -75011656 - Lx9 LINE L1 -6 7638 6922 5 930 509 292 79 35 chr13 45273424 45273651 -75010661 - MER2 DNA MER2_type -22 323 87 5 930 396 266 14 0 chr13 45273668 45273779 -75010533 - PB1D10 SINE Alu 0 117 1 5 930 293 336 87 39 chr13 45273998 45274227 -75010085 - MIR SINE MIR -21 241 2 5 930 924 177 0 0 chr13 45274395 45274536 -75009776 + B1_Mur4 SINE Alu 2 142 -8 5 930 952 254 71 26 chr13 45274599 45274908 -75009404 + MTD LTR MaLR 1 307 -89 5 930 501 232 103 21 chr13 45274907 45275051 -75009261 + MTD LTR MaLR 240 404 -15 5 930 23 33 0 0 chr13 45275237 45275267 -75009045 + AT_rich Low_complexity Low_complexity 1 30 0 5 930 498 345 88 61 chr13 45275644 45275987 -75008325 + MLT1G1 LTR MaLR 100 451 -128 5 930 1230 182 51 34 chr13 45276216 45276520 -75007792 - ORR1C1 LTR MaLR 0 378 67 5 930 2380 129 58 13 chr13 45276756 45277133 -75007179 - ORR1B1 LTR MaLR 0 394 1 5 930 341 325 103 100 chr13 45277252 45277319 -75006993 + MTEa LTR MaLR 1 67 -292 5 930 542 250 231 39 chr13 45277319 45277627 -75006685 + RLTR9A LTR ERVK 1 367 -1 5 930 461 275 65 118 chr13 45277627 45277908 -75006404 + MTEa LTR MaLR 68 367 -12 5 930 643 351 62 27 chr13 45278468 45278726 -75005586 + B4A SINE B4 3 269 -23 5 930 342 0 0 0 chr13 45278726 45278764 -75005548 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 930 676 287 145 8 chr13 45279756 45280005 -75004307 - B4 SINE B4 0 292 10 5 930 533 105 12 0 chr13 45280572 45280658 -75003654 + (TCCC)n Simple_repeat Simple_repeat 4 90 0 5 930 496 236 108 9 chr13 45280711 45280822 -75003490 - B1F SINE Alu -6 143 22 5 930 261 0 0 0 chr13 45281672 45281701 -75002611 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 5 930 24 0 0 0 chr13 45283032 45283056 -75001256 + AT_rich Low_complexity Low_complexity 1 24 0 5 930 231 36 0 0 chr13 45283074 45283102 -75001210 + (TGG)n Simple_repeat Simple_repeat 2 29 0 5 930 1043 256 65 11 chr13 45283120 45283397 -75000915 - B4 SINE B4 0 292 1 5 930 721 114 16 0 chr13 45283886 45284009 -75000303 + (GA)n Simple_repeat Simple_repeat 1 125 0 5 930 358 250 12 0 chr13 45285164 45285244 -74999068 - ID4_ SINE ID -2 81 1 5 930 417 272 40 8 chr13 45285991 45286117 -74998195 + RMER15 LTR ERVL 430 559 -16 5 930 270 0 0 0 chr13 45286259 45286289 -74998023 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 930 227 294 28 42 chr13 45286382 45286453 -74997859 + 7SLRNA srpRNA srpRNA 11 80 -234 5 930 276 304 0 12 chr13 45286687 45286767 -74997545 - RSINE1 SINE B4 0 165 87 5 930 493 271 55 41 chr13 45286785 45286931 -74997381 - B1_Mur1 SINE Alu -1 148 1 5 930 832 165 12 4 chr13 45287333 45287592 -74996720 + CT-rich Low_complexity Low_complexity 1 261 0 5 930 417 290 101 28 chr13 45287820 45288043 -74996269 - MIRb SINE MIR 0 268 33 5 930 413 264 67 87 chr13 45288227 45288422 -74995890 + B3A SINE B2 1 191 -4 5 930 301 274 149 35 chr13 45288688 45288867 -74995445 - B3A SINE B2 0 198 1 5 930 586 220 61 143 chr13 45288918 45289176 -74995136 - RMER4B LTR ERVK -9 576 343 5 930 738 184 42 51 chr13 45289198 45289387 -74994925 - RMER4B LTR ERVK -283 183 1 5 930 401 213 12 12 chr13 45289709 45289875 -74994437 + GA-rich Low_complexity Low_complexity 2 167 0 5 930 779 151 208 34 chr13 45290169 45290347 -74993965 - MTD LTR MaLR -2 417 209 5 930 1852 251 70 11 chr13 45290317 45290800 -74993512 - MTC-int LTR MaLR -520 1272 366 5 930 413 231 99 78 chr13 45290733 45290874 -74993438 + B3A SINE B2 38 181 -17 5 930 405 109 0 0 chr13 45290877 45290941 -74993371 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 930 2060 151 42 8 chr13 45291832 45292187 -74992125 + ORR1B2 LTR MaLR 1 367 0 5 930 3908 135 31 32 chr13 45292198 45292881 -74991431 + L1_Mur2 LINE L1 3627 4308 -1569 5 930 286 295 22 65 chr13 45292907 45293045 -74991267 - MLT1A1 LTR MaLR -276 132 1 5 930 288 0 0 0 chr13 45293101 45293133 -74991179 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 930 180 362 102 8 chr13 45293315 45293443 -74990869 - MIR SINE MIR 0 262 123 5 930 351 303 0 10 chr13 45293546 45293646 -74990666 + BC1_Mm scRNA scRNA 3 101 -51 5 930 231 393 17 51 chr13 45293646 45293723 -74990589 + ID_B1 SINE B4 2 172 -52 5 930 290 233 13 52 chr13 45293665 45293742 -74990570 + PB1D10 SINE Alu 37 110 -7 5 930 306 274 0 0 chr13 45293772 45293845 -74990467 + ID4 SINE ID 8 80 -3 5 930 324 222 190 10 chr13 45293891 45293991 -74990321 - MTD LTR MaLR -292 127 10 5 930 273 183 24 24 chr13 45293991 45294075 -74990237 + A-rich Low_complexity Low_complexity 2 85 0 5 930 214 214 0 0 chr13 45294176 45294218 -74990094 - L2b LINE L2 0 3375 3334 5 930 262 372 0 0 chr13 45294347 45294425 -74989887 + LTR16A LTR ERVL 207 284 -167 5 930 205 239 0 0 chr13 45294464 45294510 -74989802 - L2a LINE L2 0 3426 3381 5 930 361 260 97 0 chr13 45295046 45295160 -74989152 + B1F SINE Alu 3 128 -21 5 930 396 0 0 0 chr13 45295408 45295452 -74988860 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 930 260 200 20 0 chr13 45295571 45295621 -74988691 - MER58C DNA MER1_type -14 201 151 5 930 315 0 0 0 chr13 45295661 45295696 -74988616 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 930 228 312 66 99 chr13 45295834 45295955 -74988357 - MER102b DNA MER1_type -139 202 86 5 930 294 226 10 97 chr13 45296287 45296390 -74987922 - MTEb LTR MaLR -119 260 167 5 930 447 236 54 9 chr13 45296452 45296563 -74987749 - MTEb LTR MaLR -201 178 63 5 930 189 250 0 0 chr13 45296693 45296733 -74987579 - MIR SINE MIR -122 86 47 5 930 24 0 0 0 chr13 45297003 45297027 -74987285 + AT_rich Low_complexity Low_complexity 1 24 0 5 930 219 69 0 0 chr13 45297185 45297214 -74987098 + (A)n Simple_repeat Simple_repeat 1 29 0 5 930 242 312 150 0 chr13 45297678 45297758 -74986554 + MER81 DNA AcHobo 23 114 0 5 930 2478 130 53 8 chr13 45298321 45298716 -74985596 - MTC LTR MaLR -8 413 1 5 930 184 195 0 109 chr13 45299306 45299352 -74984960 + MIR SINE MIR 212 252 -10 5 930 379 152 12 12 chr13 45299434 45299514 -74984798 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 5 930 322 217 43 0 chr13 45299786 45299855 -74984457 + MER57A-int LTR ERV1 5822 5893 -294 5 930 246 234 78 0 chr13 45300046 45300110 -74984202 + PB1D10 SINE Alu 30 98 -51 5 930 367 130 26 0 chr13 45300111 45300188 -74984124 + GA-rich Low_complexity Low_complexity 3 81 0 5 930 516 252 31 54 chr13 45300819 45300949 -74983363 + ORR1E LTR MaLR 8 134 -225 5 930 367 274 73 36 chr13 45300930 45301040 -74983272 + B4A SINE B4 6 119 -173 5 930 295 276 35 0 chr13 45301270 45301357 -74982955 + RSINE1 SINE B4 76 165 0 5 930 305 292 151 53 chr13 45301457 45301609 -74982703 + ORR1E LTR MaLR 213 379 0 5 930 797 146 0 30 chr13 45301741 45301910 -74982402 + CT-rich Low_complexity Low_complexity 4 167 0 5 930 439 221 103 21 chr13 45301993 45302090 -74982222 - PB1D10 SINE Alu -1 116 12 5 930 665 160 0 0 chr13 45302332 45302438 -74981874 + RLTR28 LTR ERVL 419 524 0 5 930 868 179 74 35 chr13 45303543 45303745 -74980567 - B3 SINE B2 -6 210 1 6 930 348 240 78 20 chr13 45303807 45303909 -74980403 - L1MEg LINE L1 -4165 1919 1812 6 930 492 153 0 0 chr13 45304823 45304908 -74979404 + (TG)n Simple_repeat Simple_repeat 2 86 0 6 930 2299 113 78 17 chr13 45304973 45305334 -74978978 + RLTR9A2 LTR ERVK 1 383 0 6 930 205 197 0 57 chr13 45305357 45305427 -74978885 + (TATG)n Simple_repeat Simple_repeat 2 67 0 6 930 370 129 24 0 chr13 45305443 45305528 -74978784 + (TG)n Simple_repeat Simple_repeat 1 87 0 6 930 634 265 38 25 chr13 45306158 45306317 -74977995 + B3 SINE B2 54 214 -2 6 930 242 329 162 39 chr13 45306942 45307176 -74977136 - MLT1F LTR MaLR 0 548 286 6 930 598 250 162 80 chr13 45307483 45307804 -74976508 + MTE2a LTR MaLR 15 380 -16 6 930 426 244 131 53 chr13 45307809 45308087 -74976225 - L1M4 LINE L1 -711 5472 5162 6 930 266 180 16 0 chr13 45308274 45308335 -74975977 + CT-rich Low_complexity Low_complexity 2 63 0 6 930 414 134 0 0 chr13 45308462 45308529 -74975783 + (GGA)n Simple_repeat Simple_repeat 2 68 0 6 930 204 125 0 0 chr13 45309757 45309789 -74974523 + (CAT)n Simple_repeat Simple_repeat 3 34 0 6 930 374 204 50 10 chr13 45309876 45309975 -74974337 + MER53 DNA hAT 1 103 -90 6 930 1277 258 121 30 chr13 45310829 45311170 -74973142 + MTD LTR MaLR 1 376 -43 6 930 281 47 23 0 chr13 45311170 45311213 -74973099 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 930 1277 258 121 30 chr13 45311213 45311242 -74973070 + MTD LTR MaLR 377 405 -14 6 930 198 0 0 0 chr13 45311523 45311545 -74972767 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 930 322 301 53 11 chr13 45312311 45312405 -74971907 - L1MD2 LINE L1 -6139 408 311 6 930 207 0 0 0 chr13 45312573 45312596 -74971716 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 6 930 1240 54 71 6 chr13 45312597 45312766 -74971546 - B2_Mm2 SINE B2 -15 180 1 6 930 224 284 143 31 chr13 45313162 45313260 -74971052 + PB1D10 SINE Alu 9 117 0 6 930 228 35 0 0 chr13 45313566 45313595 -74970717 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 6 930 232 297 13 51 chr13 45313601 45313679 -74970633 - ID4_ SINE ID 0 83 9 6 930 269 265 30 102 chr13 45314103 45314242 -74970070 - MER31A LTR ERV1 -14 471 326 6 930 3208 269 39 20 chr13 45315082 45315882 -74968430 + RCHARR1 DNA MER1_type 5 816 -158 6 930 333 0 0 0 chr13 45315882 45315919 -74968393 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 930 3208 269 39 20 chr13 45315919 45316008 -74968304 + RCHARR1 DNA MER1_type 817 910 -64 6 930 239 349 54 12 chr13 45316054 45316222 -74968090 - L2 LINE L2 -1111 2308 2134 6 930 424 297 0 18 chr13 45317060 45317173 -74967139 - PB1D10 SINE Alu -6 111 1 6 930 470 276 76 43 chr13 45317267 45317548 -74966764 + MLT1B LTR MaLR 42 349 -59 6 930 2196 98 33 24 chr13 45318135 45318470 -74965842 + L1Md_F2 LINE L1 6245 6582 0 6 930 329 335 21 57 chr13 45318612 45318805 -74965507 - ORR1E LTR MaLR -168 191 6 6 930 288 295 132 18 chr13 45319209 45319323 -74964989 - MLT2C1 LTR ERVL -267 130 4 6 930 1090 246 78 59 chr13 45319770 45320062 -74964250 - MTEb LTR MaLR 0 379 64 6 930 306 0 0 0 chr13 45320062 45320096 -74964216 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 930 1090 246 78 59 chr13 45320096 45320174 -74964138 - MTEb LTR MaLR -316 63 3 6 930 456 19 0 0 chr13 45320587 45320640 -74963672 + (TCC)n Simple_repeat Simple_repeat 2 54 0 6 930 281 125 18 0 chr13 45320640 45320696 -74963616 + (CAT)n Simple_repeat Simple_repeat 3 59 0 6 930 378 223 10 41 chr13 45320732 45320830 -74963482 - RSINE1 SINE B4 -68 97 3 6 930 350 350 43 51 chr13 45321476 45321732 -74962580 + B4 SINE B4 3 256 -36 6 930 1137 130 0 3 chr13 45321854 45322139 -74962173 + (GA)n Simple_repeat Simple_repeat 1 284 0 6 930 1024 256 40 18 chr13 45323057 45323335 -74960977 - Cheshire DNA MER1_type -2135 285 2 6 930 251 317 66 12 chr13 45323399 45323565 -74960747 + L1ME4a LINE L1 5756 5930 -194 6 930 456 313 64 29 chr13 45323822 45323993 -74960319 - MLT1C LTR MaLR 0 591 415 6 930 790 309 75 69 chr13 45324056 45324313 -74959999 - MLT1C LTR MaLR -29 438 182 6 930 533 252 34 40 chr13 45324313 45324462 -74959850 - B1F SINE Alu -1 148 1 6 930 790 309 75 69 chr13 45324462 45324580 -74959732 - MLT1C LTR MaLR -286 181 61 6 930 1057 238 44 63 chr13 45324580 45324743 -74959569 + MTEa LTR MaLR 1 164 -215 6 930 189 0 0 0 chr13 45324743 45324764 -74959548 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 6 930 1057 238 44 63 chr13 45324764 45324799 -74959513 + MTEa LTR MaLR 165 200 -179 6 930 573 15 0 0 chr13 45324799 45324865 -74959447 + (TC)n Simple_repeat Simple_repeat 1 66 0 6 930 1057 238 44 63 chr13 45324865 45324983 -74959329 + MTEa LTR MaLR 201 311 -68 6 930 1079 262 106 42 chr13 45325242 45325620 -74958692 - MTD LTR MaLR 0 419 18 6 930 685 297 45 20 chr13 45325691 45325983 -74958329 - L1MC1 LINE L1 -9 6324 6026 6 930 292 301 0 31 chr13 45327678 45327774 -74956538 - BC1_Mm scRNA scRNA -49 103 11 6 930 1215 254 61 41 chr13 45327872 45328217 -74956095 - ORR1E LTR MaLR -7 352 1 6 930 224 315 260 10 chr13 45328736 45329028 -74955284 - L2 LINE L2 -575 2844 2480 6 930 224 338 69 50 chr13 45329746 45329964 -74954348 - L2 LINE L2 -1158 2261 2040 6 930 261 0 0 0 chr13 45332354 45332383 -74951929 + (TA)n Simple_repeat Simple_repeat 1 29 0 6 930 298 239 84 104 chr13 45332436 45332590 -74951722 + RMER30 DNA MER1_type 17 167 -35 6 930 261 0 0 0 chr13 45332737 45332766 -74951546 + (T)n Simple_repeat Simple_repeat 1 29 0 6 930 552 263 53 0 chr13 45334229 45334381 -74949931 - RSINE1 SINE B4 -2 163 4 6 930 435 328 15 7 chr13 45335490 45335625 -74948687 + B3A SINE B2 40 175 -23 6 930 228 323 95 13 chr13 45335822 45335980 -74948332 - MIR SINE MIR -66 202 33 6 930 180 0 0 0 chr13 45336251 45336271 -74948041 + (TATAA)n Simple_repeat Simple_repeat 5 24 0 6 930 469 286 0 0 chr13 45336284 45336389 -74947923 - PB1D10 SINE Alu -6 111 7 6 930 457 249 158 56 chr13 45336927 45337123 -74947189 - ID_B1 SINE B4 -8 216 1 6 930 366 42 0 0 chr13 45337212 45337260 -74947052 + (TTTTC)n Simple_repeat Simple_repeat 5 52 0 6 930 344 253 95 0 chr13 45338454 45338549 -74945763 + MER5A DNA MER1_type 4 107 -82 6 930 213 154 37 37 chr13 45338580 45338634 -74945678 + T-rich Low_complexity Low_complexity 2 55 0 6 930 27 0 0 0 chr13 45338748 45338775 -74945537 + AT_rich Low_complexity Low_complexity 1 27 0 6 930 559 274 57 41 chr13 45338910 45339104 -74945208 - B3A SINE B2 -1 197 1 6 930 428 150 102 137 chr13 45339947 45340107 -74944205 - B3A SINE B2 -32 184 1 6 930 288 270 0 0 chr13 45340618 45340681 -74943631 + C-rich Low_complexity Low_complexity 3 65 0 6 930 186 133 0 0 chr13 45340786 45340816 -74943496 + (CCCCCT)n Simple_repeat Simple_repeat 4 33 0 6 930 225 308 68 93 chr13 45342675 45342836 -74941476 - MIRb SINE MIR -77 191 35 6 930 492 349 96 85 chr13 45342976 45343424 -74940888 + LTR40a LTR ERVL 62 514 -5 6 930 749 171 8 0 chr13 45344412 45344541 -74939771 + ID_B1 SINE B4 94 223 -1 6 930 263 350 38 0 chr13 45344614 45344694 -74939618 - B1F SINE Alu -66 83 1 6 930 435 306 50 44 chr13 45344837 45345018 -74939294 - B3A SINE B2 -15 183 2 6 930 692 158 28 57 chr13 45345045 45345186 -74939126 - B1_Mus1 SINE Alu -9 139 3 6 930 354 45 0 0 chr13 45345497 45345541 -74938771 + (CAG)n Simple_repeat Simple_repeat 2 45 0 6 930 333 0 0 0 chr13 45346246 45346283 -74938029 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 930 361 230 0 0 chr13 45347533 45347607 -74936705 - RMER30 DNA MER1_type -121 81 8 6 930 362 284 29 15 chr13 45349844 45349980 -74934332 + MLT1C LTR MaLR 45 182 -285 6 930 503 293 194 55 chr13 45349980 45350233 -74934079 + B4A SINE B4 1 288 -4 6 931 294 322 86 70 chr13 45351334 45351521 -74932791 + LTR16A LTR ERVL 255 444 -7 6 931 1466 186 95 68 chr13 45351806 45352175 -74932137 - MTEa LTR MaLR 0 379 1 6 931 845 266 100 18 chr13 45352175 45352516 -74931796 + L1MC3 LINE L1 7279 7647 -138 6 931 391 320 78 0 chr13 45352527 45352655 -74931657 + B1F1 SINE Alu 5 142 -7 6 931 1227 105 35 0 chr13 45352665 45352836 -74931476 + B2_Mm1t SINE B2 3 179 -14 6 931 343 96 340 28 chr13 45352883 45352989 -74931323 + B2_Mm2 SINE B2 47 185 -10 6 931 15969 75 18 10 chr13 45353127 45355939 -74928373 + MusHAL1 LINE L1 13 2856 -497 6 931 25 31 0 0 chr13 45355948 45355980 -74928332 + AT_rich Low_complexity Low_complexity 1 32 0 6 931 22 35 0 0 chr13 45356283 45356312 -74928000 + AT_rich Low_complexity Low_complexity 1 29 0 6 931 1087 69 0 0 chr13 45358031 45358162 -74926150 - B1_Mus1 SINE Alu -16 132 2 6 931 207 0 0 0 chr13 45358238 45358261 -74926051 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 931 241 324 0 14 chr13 45358319 45358391 -74925921 + ID4 SINE ID 2 72 -11 6 931 402 258 8 31 chr13 45358401 45358529 -74925783 + GA-rich Low_complexity Low_complexity 3 127 0 6 931 1118 88 0 7 chr13 45358849 45358986 -74925326 + B1_Mus1 SINE Alu 2 138 -10 6 931 246 32 0 0 chr13 45358986 45359017 -74925295 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 931 363 266 28 43 chr13 45359089 45359266 -74925046 + Lx7 LINE L1 5716 5920 -1553 6 931 207 100 0 0 chr13 45359542 45359572 -74924740 + (T)n Simple_repeat Simple_repeat 1 30 0 6 931 283 267 55 62 chr13 45359761 45359889 -74924423 + MIRb SINE MIR 66 192 -76 6 931 386 279 47 60 chr13 45360922 45361071 -74923241 - MTEa LTR MaLR -187 192 46 6 931 881 258 43 104 chr13 45361637 45362031 -74922281 + ORR1D2 LTR MaLR 1 370 0 6 931 185 227 23 0 chr13 45362914 45362958 -74921354 - L3b LINE CR1 -3 479 435 6 931 204 40 0 0 chr13 45364057 45364082 -74920230 + (CCA)n Simple_repeat Simple_repeat 2 26 0 7 931 351 216 40 0 chr13 45364257 45364331 -74919981 + B1F SINE Alu 15 91 -58 7 931 299 217 32 32 chr13 45365492 45365587 -74918725 + MER34A LTR ERV1 1 95 -476 7 931 341 292 0 0 chr13 45366579 45366651 -74917661 - RSINE1 SINE B4 -28 137 66 7 931 270 289 95 54 chr13 45367383 45367624 -74916688 - Tigger15a DNA TcMar -76 639 389 7 931 257 339 0 69 chr13 45367756 45367886 -74916426 + MTEb LTR MaLR 9 129 -241 7 931 455 289 71 19 chr13 45367912 45368067 -74916245 + MTEb LTR MaLR 206 368 -11 7 931 1225 276 80 49 chr13 45368193 45368704 -74915608 - MT2A LTR ERVL -3 530 4 7 931 233 255 126 11 chr13 45369062 45369157 -74915155 - Charlie17a DNA MER1_type -82 137 32 7 931 421 240 0 59 chr13 45369397 45369499 -74914813 + PB1D10 SINE Alu 9 104 -13 7 931 972 0 0 0 chr13 45371191 45371299 -74913013 + (CCTTG)n Simple_repeat Simple_repeat 5 112 0 7 931 378 298 99 0 chr13 45371364 45371505 -74912807 - RSINE1 SINE B4 -8 157 3 7 931 1559 168 43 120 chr13 45371783 45372182 -74912130 - ORR1D1 LTR MaLR 0 374 7 7 931 298 245 66 75 chr13 45372331 45372437 -74911875 + PB1D10 SINE Alu 7 111 -6 7 931 274 143 133 16 chr13 45373846 45373926 -74910386 + MTEb LTR MaLR 259 366 -13 7 931 289 261 11 32 chr13 45373956 45374051 -74910261 + CT-rich Low_complexity Low_complexity 2 94 0 7 931 189 147 0 0 chr13 45374308 45374342 -74909970 + (TCTCC)n Simple_repeat Simple_repeat 1 34 0 7 931 421 263 29 7 chr13 45374441 45374579 -74909733 - B1F SINE Alu -8 141 1 7 931 207 0 0 0 chr13 45374902 45374925 -74909387 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 7 931 382 301 24 84 chr13 45375279 45375446 -74908866 + MER5B DNA MER1_type 9 165 -13 7 931 204 67 0 0 chr13 45376457 45376487 -74907825 + (T)n Simple_repeat Simple_repeat 1 30 0 7 931 744 266 55 148 chr13 45376922 45377288 -74907024 - MTD LTR MaLR -83 336 5 7 931 390 311 93 11 chr13 45378077 45378259 -74906053 + B3 SINE B2 6 202 -14 7 931 244 70 23 23 chr13 45378276 45378320 -74905992 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 931 567 204 17 17 chr13 45378453 45378568 -74905744 - PB1D9 SINE Alu 0 120 6 7 931 448 315 47 32 chr13 45378585 45378775 -74905537 - MER58A DNA MER1_type -19 205 13 7 931 2180 82 25 112 chr13 45378862 45379220 -74905092 - ORR1A2 LTR MaLR 0 327 1 7 931 201 324 16 105 chr13 45379240 45379364 -74904948 + MIR SINE MIR 36 148 -114 7 931 3556 47 47 16 chr13 45381576 45382026 -74902286 - L1Md_F2 LINE L1 -12 6570 6107 7 931 306 0 0 0 chr13 45383257 45383291 -74901021 + (T)n Simple_repeat Simple_repeat 1 34 0 7 931 914 150 0 20 chr13 45383778 45383928 -74900384 - B1_Mus1 SINE Alu -1 147 1 7 931 525 271 31 28 chr13 45384494 45384665 -74899647 + ORR1E LTR MaLR 3 172 -187 7 931 2424 101 3 0 chr13 45384665 45384991 -74899321 - ORR1A2 LTR MaLR 0 327 1 7 931 289 279 31 109 chr13 45384991 45385012 -74899300 + ORR1E LTR MaLR 165 180 -190 7 931 245 308 0 71 chr13 45385091 45385175 -74899137 + ID4_ SINE ID 5 82 -1 7 931 688 292 56 65 chr13 45386117 45386457 -74897855 - ORR1E LTR MaLR -22 337 1 7 931 504 0 0 0 chr13 45386622 45386678 -74897634 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 931 285 275 14 0 chr13 45386725 45386794 -74897518 + MER5A1 DNA MER1_type 57 126 -40 7 931 268 202 21 31 chr13 45387325 45387422 -74896890 + (TA)n Simple_repeat Simple_repeat 2 97 0 7 931 517 278 22 15 chr13 45387691 45387826 -74896486 + B1F1 SINE Alu 5 140 -9 7 931 189 0 0 0 chr13 45387945 45387966 -74896346 + (CA)n Simple_repeat Simple_repeat 1 21 0 7 931 317 296 37 0 chr13 45387976 45388084 -74896228 + L1MA4A LINE L1 5818 5929 -374 7 931 504 0 0 0 chr13 45388659 45388715 -74895597 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 7 931 646 87 67 0 chr13 45388833 45388937 -74895375 - B1_Mus1 SINE Alu -37 111 1 7 931 220 279 16 0 chr13 45389499 45389560 -74894752 + CT-rich Low_complexity Low_complexity 3 64 0 7 931 917 160 73 56 chr13 45390130 45390362 -74893950 - 7SK RNA RNA -91 240 5 7 931 495 319 101 47 chr13 45390365 45390750 -74893562 + L1M5 LINE L1 4532 4937 -1209 7 931 621 200 72 72 chr13 45391052 45391246 -74893066 - B3A SINE B2 -4 194 1 7 931 314 229 58 35 chr13 45391752 45391838 -74892474 + PB1D10 SINE Alu 20 107 -10 7 931 198 143 0 0 chr13 45391867 45391902 -74892410 + (A)n Simple_repeat Simple_repeat 1 35 0 7 931 675 215 51 6 chr13 45391915 45392093 -74892219 + MER97c DNA MER1_type? 541 726 -364 7 931 246 248 98 41 chr13 45392210 45392332 -74891980 + L1M5 LINE L1 4445 4573 -1573 7 931 282 265 0 0 chr13 45392389 45392457 -74891855 - B1_Mur3 SINE Alu -10 139 72 7 931 379 318 15 67 chr13 45392442 45392501 -74891811 + RSINE1 SINE B4 38 97 -68 7 931 1499 89 332 73 chr13 45392501 45392817 -74891495 - RMER10B LTR ERVL 0 398 1 7 931 379 318 15 67 chr13 45392817 45392892 -74891420 + RSINE1 SINE B4 98 165 0 7 931 180 0 0 0 chr13 45393315 45393335 -74890977 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 931 331 297 0 0 chr13 45393406 45393497 -74890815 + PB1D10 SINE Alu 1 91 -26 7 931 378 61 0 0 chr13 45395360 45395409 -74888903 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 7 931 324 0 0 0 chr13 45395735 45395771 -74888541 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 931 440 292 57 133 chr13 45395793 45396109 -74888203 - B4 SINE B4 0 292 1 7 931 384 281 75 35 chr13 45396973 45397066 -74887246 + RMER15 LTR ERVL 380 475 -100 7 931 1346 210 118 46 chr13 45397066 45397456 -74886856 + MTD LTR MaLR 1 418 -1 7 931 384 281 75 35 chr13 45397456 45397535 -74886777 + RMER15 LTR ERVL 476 559 -16 7 931 387 315 176 25 chr13 45397586 45397830 -74886482 + B4A SINE B4 1 281 -11 7 931 631 260 121 82 chr13 45400371 45400516 -74883796 - MTEa LTR MaLR 0 379 228 7 931 1157 75 0 0 chr13 45400516 45400662 -74883650 + B1_Mus1 SINE Alu 2 147 -1 7 931 631 260 121 82 chr13 45400662 45400881 -74883431 - MTEa LTR MaLR -152 227 1 7 931 359 346 15 0 chr13 45401545 45401678 -74882634 - RMER15 LTR ERVL -70 505 371 7 931 570 227 65 26 chr13 45401721 45401875 -74882437 - Lx8 LINE L1 -283 7190 7031 7 931 496 105 0 0 chr13 45402040 45402116 -74882196 + BC1_Mm scRNA scRNA 1 76 -76 7 931 293 264 11 54 chr13 45402185 45402277 -74882035 + ORR1D1 LTR MaLR 1 88 -286 7 931 2500 68 6 58 chr13 45402451 45402796 -74881516 - ORR1A2 LTR MaLR 0 327 1 7 931 3241 93 69 8 chr13 45403508 45403998 -74880314 - Lx3C LINE L1 -2 6974 6455 7 931 1194 140 18 18 chr13 45404002 45404228 -74880084 + L1_Mur1 LINE L1 3157 3382 -2504 7 931 811 296 73 61 chr13 45404412 45404810 -74879502 - MTE2a LTR MaLR -2 377 11 7 931 247 200 77 0 chr13 45405008 45405073 -74879239 + Lx9 LINE L1 7566 7635 -9 7 931 264 181 0 0 chr13 45405836 45405919 -74878393 + GA-rich Low_complexity Low_complexity 1 83 0 7 931 619 259 6 25 chr13 45406165 45406327 -74877985 - RSINE1 SINE B4 -4 161 3 7 931 192 125 0 0 chr13 45408265 45408297 -74876015 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 931 477 278 53 53 chr13 45408298 45408450 -74875862 - B3A SINE B2 -45 153 2 7 931 1098 112 0 0 chr13 45408656 45408834 -74875478 + (CA)n Simple_repeat Simple_repeat 2 179 0 7 931 351 0 0 0 chr13 45409801 45409840 -74874472 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 7 931 423 282 63 9 chr13 45409844 45409955 -74874357 - RSINE1 SINE B4 -43 122 6 7 931 295 320 158 28 chr13 45410056 45410246 -74874066 - ERVL-E-int LTR ERVL -2765 2902 2691 7 931 189 0 0 0 chr13 45410246 45410267 -74874045 + (GTTTG)n Simple_repeat Simple_repeat 4 24 0 7 931 295 320 158 28 chr13 45410267 45410330 -74873982 - ERVL-E-int LTR ERVL -2977 2690 2618 7 931 341 240 0 0 chr13 45410370 45410445 -74873867 - ID SINE ID -149 75 1 7 931 204 317 106 40 chr13 45411167 45411318 -74872994 - MER5B DNA MER1_type -1 177 17 7 931 297 288 112 44 chr13 45411337 45411497 -74872815 + MER5B DNA MER1_type 2 172 -6 7 931 1101 115 0 0 chr13 45411572 45411729 -74872583 + B2_Mm2 SINE B2 1 157 -38 7 931 396 0 0 0 chr13 45411729 45411773 -74872539 + (TAAAA)n Simple_repeat Simple_repeat 3 46 0 7 931 671 257 66 0 chr13 45411968 45412120 -74872192 + RSINE1 SINE B4 3 164 -1 7 931 728 327 19 30 chr13 45412742 45413004 -74871308 + B4A SINE B4 34 292 0 7 931 3277 53 2 2 chr13 45413107 45413503 -74870809 + MTA_Mm LTR MaLR 1 396 0 7 931 258 183 63 48 chr13 45414181 45414244 -74870068 + MIRb SINE MIR 160 223 -45 7 931 213 261 0 0 chr13 45414353 45414399 -74869913 + C-rich Low_complexity Low_complexity 1 46 0 7 931 3392 183 79 14 chr13 45414661 45415309 -74869003 - RLTR17 LTR ERVK -2 690 1 7 931 232 192 19 19 chr13 45415537 45415590 -74868722 + MIR SINE MIR 111 163 -99 7 931 672 262 128 54 chr13 45416188 45416595 -74867717 - RMER13A LTR ERVK -394 466 30 7 931 403 301 80 0 chr13 45417006 45417119 -74867193 - ID_B1 SINE B4 -17 207 86 7 931 201 175 0 0 chr13 45417962 45418002 -74866310 + A-rich Low_complexity Low_complexity 1 40 0 7 931 533 315 50 20 chr13 45419384 45419585 -74864727 + B4A SINE B4 2 208 -84 7 931 395 307 144 48 chr13 45419590 45419799 -74864513 + B4A SINE B4 41 273 -19 7 931 585 76 0 0 chr13 45419799 45419878 -74864434 + (CA)n Simple_repeat Simple_repeat 1 79 0 7 931 395 307 144 48 chr13 45419878 45419897 -74864415 + B4A SINE B4 274 291 -1 7 931 194 156 0 22 chr13 45419925 45419971 -74864341 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 931 367 239 57 0 chr13 45420027 45420115 -74864197 + B4 SINE B4 199 291 -1 7 931 362 330 0 85 chr13 45420709 45420838 -74863474 - RSINE1 SINE B4 -34 131 14 8 931 720 190 7 0 chr13 45420841 45420978 -74863334 + URR1B DNA MER1_type 7 144 -81 8 931 230 143 0 0 chr13 45421758 45421800 -74862512 + L1M2 LINE L1 5412 5453 -847 8 931 248 287 62 110 chr13 45421886 45422031 -74862281 + Lx8 LINE L1 6102 6239 -1234 8 931 207 0 0 0 chr13 45422034 45422057 -74862255 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 8 931 2745 268 103 39 chr13 45422118 45423182 -74861130 + Lx8 LINE L1 6394 7453 -20 8 931 229 297 119 0 chr13 45423100 45423218 -74861094 - L1MC4 LINE L1 -1337 6705 6574 8 931 877 134 5 32 chr13 45423286 45423337 -74860975 + polypurine Low_complexity Low_complexity 1 48 0 8 931 1130 117 6 0 chr13 45423337 45423516 -74860796 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 8 931 877 134 5 32 chr13 45423516 45423649 -74860663 + polypurine Low_complexity Low_complexity 49 180 0 8 931 785 123 8 0 chr13 45423671 45423801 -74860511 + B1_Mur2 SINE Alu 19 149 0 8 931 189 107 0 0 chr13 45423801 45423829 -74860483 + (A)n Simple_repeat Simple_repeat 1 28 0 8 931 403 266 42 35 chr13 45423847 45423991 -74860321 + Lx8 LINE L1 7121 7265 -208 8 931 2552 32 0 19 chr13 45424033 45424347 -74859965 - L1Md_F2 LINE L1 0 6582 6275 8 931 418 267 67 33 chr13 45424510 45424630 -74859682 + RSINE1 SINE B4 41 164 -1 8 931 1036 277 192 22 chr13 45424673 45425268 -74859044 + L1MB3 LINE L1 5488 6183 0 8 931 464 258 133 0 chr13 45425328 45425456 -74858856 + RSINE1 SINE B4 1 145 -20 8 931 354 187 37 18 chr13 45425463 45425572 -74858740 + GA-rich Low_complexity Low_complexity 4 114 0 8 931 662 156 23 8 chr13 45425584 45425701 -74858611 + B1_Mur3 SINE Alu 19 138 -11 8 931 243 0 0 0 chr13 45425701 45425728 -74858584 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 931 662 156 23 8 chr13 45425728 45425739 -74858573 + B1_Mur3 SINE Alu 139 149 0 8 931 351 0 0 0 chr13 45426675 45426714 -74857598 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 931 297 268 52 26 chr13 45426844 45426959 -74857353 + L1MEd LINE L1 967 1084 -5035 8 931 976 258 0 0 chr13 45428406 45428615 -74855697 - B3 SINE B2 -6 210 2 8 931 840 282 44 46 chr13 45428974 45429304 -74855008 - MTEa LTR MaLR -13 366 17 8 931 225 182 0 0 chr13 45430238 45430293 -74854019 + G-rich Low_complexity Low_complexity 1 55 0 8 931 306 244 34 23 chr13 45430337 45430425 -74853887 - PB1 SINE Alu 0 127 39 8 931 462 309 46 76 chr13 45430512 45430775 -74853537 - Lx5 LINE L1 -27 7433 7179 8 931 1468 230 29 28 chr13 45430783 45431335 -74852977 - Lx5 LINE L1 -588 6872 6097 8 931 324 0 0 0 chr13 45431343 45431379 -74852933 + (TA)n Simple_repeat Simple_repeat 2 37 0 8 931 211 264 11 11 chr13 45431597 45431689 -74852623 + CT-rich Low_complexity Low_complexity 3 94 0 8 931 474 296 71 50 chr13 45432465 45432715 -74851597 - B4 SINE B4 -4 288 29 8 931 558 203 130 0 chr13 45432715 45432838 -74851474 + B1_Mur1 SINE Alu 2 140 -9 8 931 474 296 71 50 chr13 45432838 45432868 -74851444 - B4 SINE B4 -264 28 2 8 931 489 195 142 0 chr13 45433247 45433360 -74850952 + RSINE1 SINE B4 2 130 -35 8 931 231 114 0 0 chr13 45433496 45433531 -74850781 + (CATATA)n Simple_repeat Simple_repeat 3 37 0 8 931 303 28 0 0 chr13 45433531 45433567 -74850745 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 931 718 303 43 71 chr13 45433575 45433898 -74850414 + MTEa LTR MaLR 66 379 0 8 931 493 216 35 134 chr13 45434438 45434464 -74849848 + B4 SINE B4 70 220 -69 8 931 1045 50 0 7 chr13 45434464 45434606 -74849706 + B1_Mm SINE Alu 1 141 -6 8 931 566 254 16 8 chr13 45435607 45435734 -74848578 + ID_B1 SINE B4 88 215 -9 8 931 189 0 0 0 chr13 45435734 45435755 -74848557 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 8 931 356 381 31 93 chr13 45436244 45436597 -74847715 - MLT1A LTR MaLR -43 331 1 8 931 440 77 15 0 chr13 45437016 45437081 -74847231 + (CA)n Simple_repeat Simple_repeat 2 67 0 8 931 220 319 43 0 chr13 45437367 45437436 -74846876 + ID4 SINE ID 2 73 -10 8 931 366 23 0 0 chr13 45437441 45437484 -74846828 + (GGGA)n Simple_repeat Simple_repeat 4 46 0 8 931 950 152 0 18 chr13 45437514 45437681 -74846631 + ORR1D1 LTR MaLR 1 164 -210 8 931 1966 95 9 65 chr13 45437693 45438030 -74846282 - ORR1A3 LTR MaLR -8 318 1 8 931 927 195 25 10 chr13 45438049 45438246 -74846066 + ORR1D1 LTR MaLR 175 374 0 8 931 350 271 99 41 chr13 45438315 45438557 -74845755 - MLT1D LTR MaLR -77 428 173 8 931 1111 245 59 53 chr13 45438707 45439068 -74845244 + MTEb LTR MaLR 2 375 -4 8 931 1779 146 100 28 chr13 45440097 45440456 -74843856 + ORR1B1 LTR MaLR 2 386 -8 8 931 498 315 69 95 chr13 45441070 45441417 -74842895 - ORR1E LTR MaLR -21 338 1 8 931 243 203 0 0 chr13 45442853 45442927 -74841385 + CT-rich Low_complexity Low_complexity 1 74 0 8 931 354 23 0 0 chr13 45442945 45442988 -74841324 + (TG)n Simple_repeat Simple_repeat 1 43 0 8 931 21 36 0 0 chr13 45444099 45444127 -74840185 + AT_rich Low_complexity Low_complexity 1 28 0 8 931 180 219 0 0 chr13 45444210 45444251 -74840061 + GA-rich Low_complexity Low_complexity 1 41 0 8 931 233 257 39 39 chr13 45445183 45445260 -74839052 + MTEa LTR MaLR 295 371 -8 8 931 393 269 19 9 chr13 45445280 45445385 -74838927 - ORR1E LTR MaLR -246 113 8 8 931 1809 122 100 10 chr13 45445459 45445758 -74838554 + ORR1A3 LTR MaLR 1 326 0 8 931 183 80 0 0 chr13 45445853 45445878 -74838434 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 8 931 791 228 55 40 chr13 45445925 45446126 -74838186 + B3 SINE B2 9 212 -4 8 931 527 209 0 9 chr13 45446670 45446776 -74837536 + PB1D10 SINE Alu 6 110 -7 8 931 354 247 7 20 chr13 45446779 45446932 -74837380 + GA-rich Low_complexity Low_complexity 2 152 0 8 931 5416 205 35 47 chr13 45447391 45447607 -74836705 - Lx7 LINE L1 0 7696 7495 8 931 274 23 47 0 chr13 45447607 45447650 -74836662 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 8 931 5416 205 35 47 chr13 45447650 45448674 -74835638 - Lx7 LINE L1 -202 7494 6471 8 931 400 305 136 40 chr13 45448674 45448872 -74835440 - B4A SINE B4 -75 217 1 8 931 902 191 49 0 chr13 45449800 45449983 -74834329 - ORR1C2 LTR MaLR -1 383 192 8 931 405 0 0 0 chr13 45449985 45450030 -74834282 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 931 270 294 54 18 chr13 45450092 45450203 -74834109 - RSINE1 SINE B4 -29 136 22 8 931 386 212 25 0 chr13 45450211 45450291 -74834021 + RMER30 DNA MER1_type 120 201 -1 8 931 297 286 0 0 chr13 45450351 45450446 -74833866 - MLT1J2 LTR MaLR -341 171 39 8 931 3069 59 201 2 chr13 45451413 45451840 -74832472 - RLTR1B LTR ERV1 0 512 1 8 931 606 322 93 7 chr13 45452139 45452408 -74831904 - MLT1C LTR MaLR -22 445 154 8 931 343 200 14 0 chr13 45452408 45452478 -74831834 - L1Md_F LINE L1 -5801 718 648 8 931 3107 53 22 12 chr13 45452535 45452951 -74831361 + L1_Mus3 LINE L1 6209 6628 -10 8 931 382 213 0 13 chr13 45453174 45453250 -74831062 + ID SINE ID 1 75 -149 8 931 705 250 171 87 chr13 45453249 45453582 -74830730 + MTD LTR MaLR 59 419 0 8 931 534 263 9 0 chr13 45453589 45453703 -74830609 + ID_B1 SINE B4 81 195 -29 8 931 342 326 14 43 chr13 45454124 45454140 -74830172 + ID_B1 SINE B4 70 203 -21 8 931 427 271 49 0 chr13 45454140 45454262 -74830050 + B1F SINE Alu 1 128 -21 8 931 656 245 19 68 chr13 45455066 45455272 -74829040 - B3A SINE B2 -2 196 1 8 931 505 239 13 90 chr13 45455435 45455591 -74828721 + B1F SINE Alu 1 144 -5 8 931 572 218 35 77 chr13 45455736 45455905 -74828407 - MTE2a LTR MaLR -52 327 166 8 931 3464 264 100 23 chr13 45455910 45456923 -74827389 - Lx8 LINE L1 -9 7464 6374 8 931 967 302 18 7 chr13 45457211 45457488 -74826824 - B4A SINE B4 -9 283 4 8 931 356 248 19 38 chr13 45457863 45457968 -74826344 - MLT1A1 LTR MaLR 0 408 306 8 931 277 303 67 22 chr13 45459725 45459860 -74824452 - RMER15 LTR ERVL -13 562 422 8 931 954 195 102 5 chr13 45459872 45459937 -74824375 + B3 SINE B2 2 71 -145 8 931 525 16 0 0 chr13 45459937 45459999 -74824313 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 931 954 195 102 5 chr13 45459999 45460129 -74824183 + B3 SINE B2 72 216 0 8 931 27 0 0 0 chr13 45460133 45460160 -74824152 + AT_rich Low_complexity Low_complexity 1 27 0 8 931 693 222 7 0 chr13 45460628 45460763 -74823549 - MTEa LTR MaLR -243 136 1 8 931 254 206 10 40 chr13 45460881 45460982 -74823330 + GA-rich Low_complexity Low_complexity 3 100 0 8 931 1341 237 92 11 chr13 45461312 45461692 -74822620 + MER68 LTR ERVL 3 413 -150 8 931 245 291 78 52 chr13 45461803 45461995 -74822317 - L2a LINE L2 -32 3394 3198 8 931 875 227 179 49 chr13 45462031 45462360 -74821952 - MTE2b LTR MaLR -7 372 1 8 931 256 346 38 9 chr13 45462369 45462474 -74821838 + MTEa LTR MaLR 5 112 -267 8 931 532 204 40 144 chr13 45462492 45462615 -74821697 + L1_Rod LINE L1 5640 5756 -91 8 931 1237 193 0 0 chr13 45462615 45462822 -74821490 + B3 SINE B2 2 208 -8 8 931 532 204 40 144 chr13 45462822 45462899 -74821413 + L1_Rod LINE L1 5757 5819 -28 8 931 880 283 31 41 chr13 45462888 45463205 -74821107 + Lx9 LINE L1 6962 7275 -369 8 931 629 83 0 10 chr13 45463231 45463328 -74820984 + ORR1B1 LTR MaLR 299 394 0 8 931 747 259 107 97 chr13 45463415 45463847 -74820465 + L1MC4 LINE L1 7602 8037 -5 8 931 715 249 31 18 chr13 45463922 45464147 -74820165 - L1MB2 LINE L1 -16 6155 5928 8 931 6081 53 4 4 chr13 45464149 45464904 -74819408 + L1Md_F2 LINE L1 5826 6580 -2 8 931 357 313 5 108 chr13 45464945 45465131 -74819181 - B4A SINE B4 0 292 126 8 931 2538 299 87 25 chr13 45465151 45465227 -74819085 - L1_Mur3 LINE L1 -85 5795 5721 8 931 2362 84 22 0 chr13 45465227 45465547 -74818765 - ORR1A2 LTR MaLR 0 327 1 9 931 2538 299 87 25 chr13 45465547 45466738 -74817574 - L1_Mur3 LINE L1 -160 5720 4450 8 931 246 213 0 0 chr13 45466848 45466895 -74817417 + (CA)n Simple_repeat Simple_repeat 2 48 0 9 931 245 89 22 0 chr13 45467037 45467082 -74817230 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 9 931 208 143 0 0 chr13 45467435 45467470 -74816842 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 931 281 267 121 32 chr13 45468128 45468252 -74816060 + L1MC LINE L1 3563 3697 -2449 9 931 258 178 0 0 chr13 45468815 45468860 -74815452 + B1F2 SINE Alu 1 45 -104 9 931 589 221 6 6 chr13 45468912 45469089 -74815223 + (CA)n Simple_repeat Simple_repeat 2 178 0 9 931 598 209 11 11 chr13 45469061 45469240 -74815072 + (CATATA)n Simple_repeat Simple_repeat 1 179 0 9 931 238 323 0 15 chr13 45470066 45470132 -74814180 - ID4 SINE ID -11 72 8 9 931 1751 208 71 5 chr13 45471358 45471750 -74812562 - MTC LTR MaLR -3 418 1 9 931 492 48 0 0 chr13 45472032 45472095 -74812217 + (TG)n Simple_repeat Simple_repeat 1 63 0 9 931 288 111 0 0 chr13 45472095 45472149 -74812163 + (GA)n Simple_repeat Simple_repeat 2 55 0 9 931 664 322 35 28 chr13 45472201 45472485 -74811827 - B4A SINE B4 -6 286 1 9 931 33 0 0 0 chr13 45472488 45472521 -74811791 + AT_rich Low_complexity Low_complexity 1 33 0 9 931 231 254 30 45 chr13 45472583 45472649 -74811663 - RSINE1 SINE B4 -58 107 43 9 931 2408 229 106 15 chr13 45472655 45473143 -74811169 - RCHARR1 DNA MER1_type -22 952 429 9 931 450 0 0 0 chr13 45473143 45473193 -74811119 + (TA)n Simple_repeat Simple_repeat 1 50 0 9 931 261 0 0 0 chr13 45473193 45473221 -74811091 + (GA)n Simple_repeat Simple_repeat 2 30 0 9 931 2408 229 106 15 chr13 45473221 45473448 -74810864 - RCHARR1 DNA MER1_type -546 428 172 9 931 663 221 197 44 chr13 45473475 45473594 -74810718 + ORR1D2 LTR MaLR 55 203 -167 9 931 1138 95 0 0 chr13 45473594 45473741 -74810571 + B1_Mus2 SINE Alu 1 147 0 9 931 663 221 197 44 chr13 45473741 45473895 -74810417 + ORR1D2 LTR MaLR 204 370 0 9 931 539 306 32 6 chr13 45473908 45474066 -74810246 - RCHARR1 DNA MER1_type -812 162 1 9 931 1350 300 97 26 chr13 45474620 45475167 -74809145 - Lx8 LINE L1 -149 7324 6739 9 931 233 185 0 36 chr13 45475177 45475233 -74809079 + (TTTG)n Simple_repeat Simple_repeat 1 54 0 9 931 429 264 124 59 chr13 45475299 45475637 -74808675 + L1MC4 LINE L1 7543 7902 -140 9 931 185 35 69 0 chr13 45475766 45475795 -74808517 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 931 1052 122 0 0 chr13 45475798 45475946 -74808366 - B1_Mus1 SINE Alu 0 148 1 9 931 1347 113 301 91 chr13 45476019 45476366 -74807946 - MTC LTR MaLR -1 420 1 9 931 521 270 22 7 chr13 45476374 45476512 -74807800 + B1_Mur1 SINE Alu 10 149 0 9 931 1051 267 31 24 chr13 45476517 45476805 -74807507 + B4 SINE B4 3 292 0 9 931 363 137 0 0 chr13 45476805 45476878 -74807434 + (CA)n Simple_repeat Simple_repeat 1 73 0 9 931 185 0 40 0 chr13 45477410 45477435 -74806877 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 9 931 565 218 24 24 chr13 45478057 45478184 -74806128 + ID_B1 SINE B4 84 210 -14 9 931 381 264 54 48 chr13 45478184 45478203 -74806109 + B1F SINE Alu 3 149 0 9 931 233 130 0 42 chr13 45478219 45478267 -74806045 + G-rich Low_complexity Low_complexity 2 47 0 9 931 1193 68 0 0 chr13 45478430 45478577 -74805735 - B1_Mus1 SINE Alu 0 148 2 9 931 353 163 39 129 chr13 45478852 45479007 -74805305 + RLTR15 LTR ERVK 34 174 -185 9 931 299 288 18 23 chr13 45479333 45479457 -74804855 + MLT1A1 LTR MaLR 225 396 -12 9 931 643 244 85 1 chr13 45479650 45479804 -74804508 + B3A SINE B2 1 165 -33 9 931 441 54 0 0 chr13 45479804 45479860 -74804452 + (CA)n Simple_repeat Simple_repeat 2 57 0 9 931 485 262 63 42 chr13 45479860 45479896 -74804416 + B2_Mm2 SINE B2 154 194 -1 9 931 913 174 18 12 chr13 45480115 45480278 -74804034 - RSINE1 SINE B4 0 165 2 9 931 1847 99 85 0 chr13 45481070 45481363 -74802949 + ORR1A2 LTR MaLR 2 319 -8 9 931 564 227 23 8 chr13 45481519 45481652 -74802660 - B1F SINE Alu -14 135 1 9 932 759 247 68 76 chr13 45482153 45482403 -74801909 - B4A SINE B4 -19 273 26 9 932 512 194 0 107 chr13 45482408 45482529 -74801783 - PB1D10 SINE Alu -9 108 1 9 932 38 0 0 0 chr13 45482557 45482595 -74801717 + AT_rich Low_complexity Low_complexity 1 38 0 9 932 332 320 23 31 chr13 45482595 45482724 -74801588 - ID_B1 SINE B4 -9 215 88 9 932 226 308 0 0 chr13 45482971 45483036 -74801276 - ID SINE ID -158 66 2 9 932 404 217 142 0 chr13 45483135 45483241 -74801071 - RSINE1 SINE B4 -42 123 3 9 932 22 35 0 0 chr13 45483377 45483406 -74800906 + AT_rich Low_complexity Low_complexity 1 29 0 9 932 259 177 32 16 chr13 45483552 45483615 -74800697 + T-rich Low_complexity Low_complexity 5 68 0 9 932 201 167 0 0 chr13 45486925 45486961 -74797351 + T-rich Low_complexity Low_complexity 5 40 0 9 932 512 272 72 0 chr13 45487979 45488104 -74796208 - RSINE1 SINE B4 -29 136 3 9 932 435 38 0 0 chr13 45488197 45488250 -74796062 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 932 207 167 0 0 chr13 45490362 45490398 -74793914 + G-rich Low_complexity Low_complexity 1 36 0 9 932 675 249 54 10 chr13 45490593 45490796 -74793516 + B3 SINE B2 1 212 -4 9 932 1182 290 102 92 chr13 45491836 45493150 -74791162 - L1ME2z LINE L1 0 6444 5135 9 932 603 206 86 18 chr13 45493756 45493919 -74790393 - ORR1D1 LTR MaLR -35 339 166 9 932 277 117 33 0 chr13 45493922 45493982 -74790330 + (GA)n Simple_repeat Simple_repeat 2 63 0 9 932 354 91 0 0 chr13 45493984 45494039 -74790273 + (G)n Simple_repeat Simple_repeat 1 55 0 9 932 768 216 98 12 chr13 45494039 45494212 -74790100 - ORR1D1 LTR MaLR -186 188 1 9 932 369 0 0 0 chr13 45494374 45494415 -74789897 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 932 24 0 0 0 chr13 45494415 45494439 -74789873 + AT_rich Low_complexity Low_complexity 1 24 0 9 932 351 157 320 55 chr13 45494442 45494592 -74789720 - B3A SINE B2 -4 212 1 9 932 614 260 26 13 chr13 45494676 45494828 -74789484 + RSINE1 SINE B4 10 163 -2 9 932 919 224 20 10 chr13 45494915 45495113 -74789199 - B3 SINE B2 -15 201 2 9 932 185 35 69 0 chr13 45495518 45495547 -74788765 + (GAAAA)n Simple_repeat Simple_repeat 4 34 0 9 932 632 77 0 11 chr13 45496001 45496093 -74788219 + (GGA)n Simple_repeat Simple_repeat 2 92 0 9 932 631 174 0 11 chr13 45496646 45496736 -74787576 + polypyrimidine Low_complexity Low_complexity 91 180 0 9 932 1125 83 0 0 chr13 45496736 45496916 -74787396 + (TCC)n Simple_repeat Simple_repeat 1 180 0 9 932 631 174 0 11 chr13 45496916 45496958 -74787354 + polypyrimidine Low_complexity Low_complexity 49 90 0 9 932 1104 89 0 0 chr13 45496958 45497138 -74787174 + (TCC)n Simple_repeat Simple_repeat 1 180 0 9 932 631 174 0 11 chr13 45497138 45497184 -74787128 + polypyrimidine Low_complexity Low_complexity 3 48 0 9 932 472 214 82 0 chr13 45497206 45497304 -74787008 - PB1D9 SINE Alu -8 112 7 9 932 330 210 37 0 chr13 45498571 45498652 -74785660 + B4 SINE B4 2 85 -207 9 932 247 284 77 19 chr13 45498666 45498770 -74785542 + B4 SINE B4 156 265 -27 9 932 213 39 0 0 chr13 45498831 45498857 -74785455 + (T)n Simple_repeat Simple_repeat 1 26 0 9 932 241 239 0 112 chr13 45498931 45499011 -74785301 + PB1D10 SINE Alu 45 115 -2 9 932 2019 75 0 11 chr13 45499011 45499279 -74785033 + L1_Mus1 LINE L1 6302 6566 -1 9 932 307 300 44 44 chr13 45499409 45499545 -74784767 - RSINE1 SINE B4 -19 146 11 9 932 280 272 0 36 chr13 45499625 45499709 -74784603 - ID4 SINE ID -1 82 2 9 932 501 246 214 36 chr13 45500418 45500693 -74783619 - MLT1F1 LTR MaLR -177 371 70 1 932 198 0 0 0 chr13 45500961 45500983 -74783329 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 932 195 186 0 0 chr13 45501478 45501521 -74782791 + (CATA)n Simple_repeat Simple_repeat 4 46 0 3 932 195 129 0 0 chr13 45501700 45501731 -74782581 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 932 541 268 0 21 chr13 45502491 45502636 -74781676 - B1F SINE Alu -6 143 2 5 932 626 210 161 57 chr13 45503051 45503243 -74781069 + ID_B1 SINE B4 9 220 -4 6 932 661 245 58 0 chr13 45503243 45503382 -74780930 + B1_Mur2 SINE Alu 1 147 -2 7 932 326 230 264 0 chr13 45503404 45503491 -74780821 + PB1D10 SINE Alu 1 110 -7 8 932 284 165 65 11 chr13 45503505 45503597 -74780715 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 9 932 498 61 0 0 chr13 45504411 45504477 -74779835 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 932 759 221 8 0 chr13 45504477 45504608 -74779704 - RSINE1 SINE B4 -30 135 4 1 932 587 273 29 99 chr13 45505235 45505548 -74778764 + B4 SINE B4 2 292 0 1 932 486 0 0 0 chr13 45506682 45506736 -74777576 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 932 317 298 32 40 chr13 45507614 45507740 -74776572 + RSINE1 SINE B4 9 133 -32 1 932 436 250 175 7 chr13 45508712 45508759 -74775553 + RSINE1 SINE B4 3 55 -110 1 932 1236 164 0 5 chr13 45508759 45508961 -74775351 + B3 SINE B2 3 203 -13 1 932 436 250 175 7 chr13 45508961 45509050 -74775262 + RSINE1 SINE B4 56 162 -3 1 932 1001 299 62 12 chr13 45509174 45509512 -74774800 - ORR1E LTR MaLR -1 358 4 1 932 507 73 0 0 chr13 45510211 45510279 -74774033 + (GGGA)n Simple_repeat Simple_repeat 4 71 0 1 932 2432 154 12 19 chr13 45510279 45510709 -74773603 - RMER10A LTR ERVL -15 427 1 1 932 184 337 0 112 chr13 45510768 45510875 -74773437 + L4 LINE RTE 1777 1871 -158 2 932 187 173 0 37 chr13 45511589 45511643 -74772669 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 932 317 208 165 68 chr13 45511685 45511788 -74772524 - PB1D10 SINE Alu 0 117 5 2 932 212 211 96 0 chr13 45512570 45512622 -74771690 - MIRm SINE MIR -8 268 212 2 932 267 185 0 47 chr13 45512655 45512740 -74771572 + C-rich Low_complexity Low_complexity 3 83 0 2 932 393 275 43 60 chr13 45512859 45512975 -74771337 + RSINE1 SINE B4 3 116 -49 2 932 727 254 74 5 chr13 45513488 45513690 -74770622 + ID_B1 SINE B4 4 219 -5 2 932 321 360 167 29 chr13 45514740 45514980 -74769332 + B4A SINE B4 1 273 -19 2 932 275 346 25 0 chr13 45515132 45515213 -74769099 + B3A SINE B2 93 175 -23 2 932 26 0 0 0 chr13 45515451 45515477 -74768835 + AT_rich Low_complexity Low_complexity 1 26 0 2 932 493 333 7 7 chr13 45515486 45515628 -74768684 + B1F2 SINE Alu 1 142 -7 3 932 309 256 67 0 chr13 45515721 45515811 -74768501 + B3A SINE B2 100 195 -3 3 932 315 330 18 9 chr13 45515967 45516077 -74768235 - MLT1A LTR MaLR -7 401 291 3 932 335 321 28 63 chr13 45516166 45516309 -74768003 - MLT1A LTR MaLR -236 138 1 3 932 535 290 0 0 chr13 45516991 45517122 -74767190 + ID_B1 SINE B4 94 224 0 3 932 525 169 160 8 chr13 45517299 45517424 -74766888 + B1F1 SINE Alu 5 148 -1 3 932 459 286 23 23 chr13 45518740 45518869 -74765443 + RSINE1 SINE B4 2 130 -35 3 932 314 216 30 43 chr13 45518818 45518982 -74765330 + RMER17D2 LTR ERVK 263 424 -385 3 932 306 197 0 62 chr13 45519632 45519697 -74764615 - ID_B1 SINE B4 -5 219 159 3 932 423 0 0 0 chr13 45520210 45520257 -74764055 + (CA)n Simple_repeat Simple_repeat 1 47 0 3 932 245 312 13 0 chr13 45520527 45520604 -74763708 + ID4 SINE ID 2 79 -4 3 932 323 207 217 35 chr13 45521197 45521312 -74763000 + B1F2 SINE Alu 5 140 -9 4 932 727 280 13 6 chr13 45521330 45521488 -74762824 + ID_B1 SINE B4 9 167 -57 4 932 255 339 29 101 chr13 45521406 45521555 -74762757 + B1F SINE Alu 6 144 -6 4 932 747 242 139 2 chr13 45521561 45521778 -74762534 + MTD LTR MaLR 165 405 -14 4 932 482 277 0 44 chr13 45522322 45522334 -74761978 - ID_B1 SINE B4 -1 223 213 4 932 1022 138 0 6 chr13 45522334 45522509 -74761803 + (TTTC)n Simple_repeat Simple_repeat 2 175 0 4 932 482 277 0 44 chr13 45522509 45522632 -74761680 - ID_B1 SINE B4 -12 212 94 4 932 2131 194 46 34 chr13 45522827 45523328 -74760984 - RCHARR1 DNA MER1_type -1 973 467 4 932 446 336 8 0 chr13 45523328 45523453 -74760859 + RSINE1 SINE B4 3 128 -37 4 932 1513 279 34 40 chr13 45523501 45523979 -74760333 - RCHARR1 DNA MER1_type -494 480 6 4 932 299 297 33 0 chr13 45525528 45525619 -74758693 + Lx8 LINE L1 5815 5908 -1565 4 932 226 234 0 21 chr13 45525859 45525907 -74758405 - B4 SINE B4 -244 48 2 4 932 305 62 0 20 chr13 45526049 45526098 -74758214 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 932 572 313 70 14 chr13 45526985 45527199 -74757113 + MER2 DNA MER2_type 59 284 -61 5 932 404 194 41 41 chr13 45529068 45529165 -74755147 - RCHARR1 DNA MER1_type -566 408 312 5 932 3036 60 0 3 chr13 45529183 45529569 -74754743 - L1Md_F2 LINE L1 -11 6571 6187 5 932 941 267 112 8 chr13 45530141 45530383 -74753929 - B4A SINE B4 -9 283 17 5 932 2830 73 31 5 chr13 45531006 45531390 -74752922 + MTB LTR MaLR 7 400 0 5 932 324 261 56 0 chr13 45531553 45531633 -74752679 - ID4_ SINE ID -64 88 5 5 932 219 175 0 0 chr13 45531911 45531968 -74752344 + T-rich Low_complexity Low_complexity 1 57 0 5 932 220 267 0 118 chr13 45532014 45532082 -74752230 + PB1D7 SINE Alu 1 60 -60 5 932 357 263 40 0 chr13 45532106 45532205 -74752107 + GA-rich Low_complexity Low_complexity 4 106 0 5 932 242 233 19 22 chr13 45533308 45533376 -74750936 - PB1D10 SINE Alu -30 97 27 6 932 514 250 50 8 chr13 45533578 45533699 -74750613 - B1F SINE Alu -23 126 1 6 932 702 240 45 59 chr13 45534402 45534623 -74749689 + ID_B1 SINE B4 2 219 -5 6 932 243 0 0 0 chr13 45534627 45534654 -74749658 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 932 320 247 23 80 chr13 45535266 45535354 -74748958 + B1F1 SINE Alu 13 95 -54 6 932 462 167 12 43 chr13 45535387 45535550 -74748762 + (CA)n Simple_repeat Simple_repeat 1 158 0 6 932 219 179 45 0 chr13 45535562 45535629 -74748683 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 932 1086 259 82 25 chr13 45536463 45536819 -74747493 + MTEb LTR MaLR 1 376 -3 6 932 542 302 28 45 chr13 45537103 45537280 -74747032 + RMER15 LTR ERVL 337 510 -65 6 932 298 320 82 64 chr13 45538569 45538836 -74745476 - ORR1E LTR MaLR -11 348 77 6 932 188 34 0 33 chr13 45539316 45539346 -74744966 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 6 932 269 261 15 0 chr13 45540400 45540465 -74743847 + tRNA-Ala-GCY_ tRNA tRNA 3 68 -7 7 932 365 229 0 0 chr13 45540601 45540671 -74743641 - ID4 SINE ID -12 71 2 7 932 490 209 29 14 chr13 45540864 45540983 -74743329 - B1_Mur1 SINE Alu 0 149 3 7 932 317 300 62 97 chr13 45541112 45541237 -74743075 + ID_B1 SINE B4 85 213 -11 7 932 225 0 0 0 chr13 45541237 45541262 -74743050 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 932 317 300 62 97 chr13 45541262 45541280 -74743032 + ID_B1 SINE B4 214 223 -1 7 932 447 273 100 15 chr13 45541426 45541556 -74742756 + B4A SINE B4 132 272 -20 7 932 468 0 0 0 chr13 45541559 45541611 -74742701 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 932 372 254 205 26 chr13 45541611 45541728 -74742584 + B1F1 SINE Alu 4 141 -8 7 932 232 143 48 0 chr13 45542258 45542300 -74742012 - PB1D7 SINE Alu 0 120 77 7 932 22 0 0 0 chr13 45542357 45542379 -74741933 + AT_rich Low_complexity Low_complexity 1 22 0 7 932 426 20 0 0 chr13 45542393 45542444 -74741868 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 8 932 1235 35 0 0 chr13 45542446 45542587 -74741725 - B1_Mm SINE Alu -6 141 1 8 932 656 246 22 0 chr13 45542711 45542849 -74741463 - RSINE1 SINE B4 0 165 25 8 932 441 0 0 0 chr13 45542851 45542900 -74741412 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 932 441 267 21 90 chr13 45542905 45543049 -74741263 - B1F SINE Alu -15 134 1 8 932 1275 335 53 48 chr13 45543354 45544213 -74740099 - MTE-int LTR MaLR -610 970 40 8 932 244 318 59 68 chr13 45544254 45544372 -74739940 - ORR1E LTR MaLR -19 360 244 8 932 264 122 0 0 chr13 45544382 45544423 -74739889 + (GA)n Simple_repeat Simple_repeat 1 41 0 8 932 270 340 56 9 chr13 45544432 45544539 -74739773 - ORR1E LTR MaLR -234 125 14 8 932 2575 131 37 17 chr13 45544572 45544977 -74739335 - MTC LTR MaLR -8 413 1 8 932 907 278 94 16 chr13 45545018 45545325 -74738987 - MER44A DNA MER2_type -8 331 1 8 932 265 125 36 0 chr13 45546071 45546127 -74738185 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 9 932 2063 134 8 81 chr13 45546617 45546999 -74737313 - ORR1B1 LTR MaLR 0 394 41 9 932 203 257 27 13 chr13 45547003 45547078 -74737234 + (TA)n Simple_repeat Simple_repeat 2 77 0 9 932 268 168 0 2 chr13 45547087 45547161 -74737151 - MT2A LTR ERVL 0 567 469 9 932 347 311 10 0 chr13 45547844 45547947 -74736365 - Tigger5 DNA MER2_type -12 2394 2291 9 932 648 340 0 33 chr13 45547943 45548156 -74736156 - Tigger5 DNA MER2_type -2164 242 37 9 932 35 0 0 0 chr13 45548216 45548251 -74736061 + AT_rich Low_complexity Low_complexity 1 35 0 9 932 272 344 0 40 chr13 45548800 45548900 -74735412 - PB1D10 SINE Alu -21 96 1 9 932 586 267 29 22 chr13 45549261 45549399 -74734913 - B1_Mur1 SINE Alu 0 149 11 9 932 237 345 60 87 chr13 45549265 45549414 -74734898 - B4 SINE B4 -67 225 81 9 932 610 242 38 0 chr13 45550326 45550458 -74733854 + B1F SINE Alu 8 144 -5 9 932 180 368 42 34 chr13 45550904 45551022 -74733290 + MER5A DNA MER1_type 66 184 -5 1 932 654 229 239 57 chr13 45551026 45551327 -74732985 - ORR1E LTR MaLR -2 357 2 1 932 279 0 0 0 chr13 45551513 45551544 -74732768 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 932 299 288 53 53 chr13 45551594 45551726 -74732586 + RSINE1 SINE B4 15 146 -19 1 932 208 376 28 66 chr13 45551746 45551957 -74732355 - L3 LINE CR1 -226 4263 4061 1 932 729 199 0 0 chr13 45552341 45552492 -74731820 + (TA)n Simple_repeat Simple_repeat 1 151 0 1 932 213 139 0 0 chr13 45552960 45553003 -74731309 + (A)n Simple_repeat Simple_repeat 1 43 0 1 932 230 275 158 55 chr13 45553221 45553367 -74730945 - MIRb SINE MIR -15 253 93 1 932 435 38 0 0 chr13 45553486 45553539 -74730773 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 932 545 210 15 53 chr13 45553611 45553742 -74730570 + L1MC5 LINE L1 6697 6822 -1139 1 932 290 200 47 0 chr13 45553743 45553828 -74730484 + (TA)n Simple_repeat Simple_repeat 1 89 0 1 932 447 187 214 45 chr13 45554090 45554202 -74730110 - B1_Mm SINE Alu -14 133 3 1 932 203 0 0 36 chr13 45554216 45554244 -74730068 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 932 1184 58 0 0 chr13 45554244 45554383 -74729929 - B1_Mus2 SINE Alu -8 139 1 1 932 300 336 68 17 chr13 45555180 45555192 -74729120 + B1F2 SINE Alu 1 65 -84 1 932 330 292 51 20 chr13 45555192 45555290 -74729022 + ID_B1 SINE B4 94 194 -30 1 932 942 308 68 78 chr13 45555331 45555427 -74728885 - MLT1F2 LTR MaLR -14 546 461 1 932 705 217 174 0 chr13 45555427 45555611 -74728701 - B3 SINE B2 0 216 1 1 932 942 308 68 78 chr13 45555611 45555923 -74728389 - MLT1F2 LTR MaLR -100 460 142 1 932 1167 160 0 34 chr13 45555923 45556130 -74728182 - ORR1B2 LTR MaLR 0 367 168 1 932 189 107 0 0 chr13 45556168 45556196 -74728116 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 1 932 427 308 104 30 chr13 45556249 45556413 -74727899 - MLT1J LTR MaLR -47 465 290 1 932 303 306 101 7 chr13 45556608 45556746 -74727566 + MLT1J1 LTR MaLR 77 227 -217 1 932 701 269 67 0 chr13 45557931 45558124 -74726188 + ID_B1 SINE B4 2 207 -17 1 932 670 287 15 15 chr13 45558146 45558344 -74725968 + B3 SINE B2 5 202 -14 1 932 533 257 6 0 chr13 45558468 45558647 -74725665 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 932 775 180 0 17 chr13 45558613 45558794 -74725518 + (CATA)n Simple_repeat Simple_repeat 1 178 0 1 932 274 146 0 0 chr13 45558794 45558835 -74725477 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 932 308 325 125 0 chr13 45558837 45558957 -74725355 + L1M4 LINE L1 3471 3605 -2541 1 932 693 166 224 44 chr13 45558974 45559157 -74725155 - B3 SINE B2 0 216 1 1 932 348 242 137 0 chr13 45559763 45559858 -74724454 + PB1D7 SINE Alu 13 120 0 1 932 906 218 40 36 chr13 45559892 45560116 -74724196 + B4A SINE B4 2 226 -66 1 932 383 192 277 56 chr13 45560121 45560303 -74724009 + Lx8 LINE L1 7116 7337 -136 1 932 59 65 0 0 chr13 45560304 45560412 -74723900 + AT_rich Low_complexity Low_complexity 1 108 0 1 932 793 161 14 35 chr13 45560421 45560563 -74723749 + B1_Mur3 SINE Alu 1 139 -10 1 932 354 45 0 0 chr13 45560563 45560607 -74723705 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 932 225 0 0 0 chr13 45560613 45560638 -74723674 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 932 471 130 0 0 chr13 45560638 45560715 -74723597 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 932 294 132 0 0 chr13 45562113 45562166 -74722146 + (CAGA)n Simple_repeat Simple_repeat 2 54 0 1 932 601 242 52 26 chr13 45562424 45562615 -74721697 + L1M4 LINE L1 4176 4371 -1775 1 932 305 309 132 12 chr13 45562769 45562936 -74721376 + L1M4 LINE L1 4358 4544 -1602 1 932 452 294 125 0 chr13 45563065 45563325 -74720987 - L1M4 LINE L1 -716 5468 5179 1 932 329 298 168 5 chr13 45563325 45563410 -74720902 - L1M4 LINE L1 -1357 4789 4694 1 932 490 67 13 13 chr13 45563410 45563486 -74720826 + (TA)n Simple_repeat Simple_repeat 1 76 0 1 932 329 298 168 5 chr13 45563486 45563609 -74720703 - L1M4 LINE L1 -1453 4693 4548 1 932 288 327 89 13 chr13 45563916 45564074 -74720238 + B3 SINE B2 47 216 0 1 932 242 234 15 15 chr13 45564353 45564418 -74719894 + PB1D10 SINE Alu 49 113 -4 1 932 295 274 129 59 chr13 45564464 45564735 -74719577 - ORSL-2b DNA Tip100 -111 397 108 1 932 336 250 0 22 chr13 45566178 45566267 -74718045 - PB1D7 SINE Alu -21 129 46 1 932 242 260 55 91 chr13 45566295 45566405 -74717907 + MIR SINE MIR 121 226 -36 1 932 223 401 0 6 chr13 45566425 45566598 -74717714 + G-rich Low_complexity Low_complexity 3 174 0 1 932 303 279 68 81 chr13 45566610 45566758 -74717554 + HAL1-3A_ME LINE L1 2293 2438 -420 1 932 467 159 17 17 chr13 45566915 45567030 -74717282 + (CATA)n Simple_repeat Simple_repeat 4 118 0 1 932 638 156 0 67 chr13 45567067 45567260 -74717052 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 932 293 278 103 70 chr13 45567265 45567478 -74716834 + L1MB4 LINE L1 5780 5999 -181 1 932 256 311 0 0 chr13 45567554 45567615 -74716697 - PB1D10 SINE Alu -54 63 3 1 932 1117 43 0 0 chr13 45567903 45568041 -74716271 + B1_Mus2 SINE Alu 10 147 0 1 932 1185 90 84 0 chr13 45568261 45568439 -74715873 - B2_Mm1a SINE B2 0 193 1 1 932 1149 72 0 0 chr13 45568440 45568579 -74715733 - B1_Mus2 SINE Alu -8 139 1 1 932 597 269 174 36 chr13 45569400 45569687 -74714625 - MTE2b LTR MaLR 0 379 59 1 932 1383 204 138 14 chr13 45569806 45570169 -74714143 + MTD LTR MaLR 1 408 -11 1 932 537 237 6 57 chr13 45570188 45570458 -74713854 + L1MD LINE L1 5182 5436 -923 1 932 252 262 11 111 chr13 45570489 45570579 -74713733 + ID4 SINE ID 1 81 -2 1 932 273 254 126 102 chr13 45570602 45570817 -74713495 - RMER2 LTR ERV1 -29 538 319 1 932 234 333 97 0 chr13 45571033 45571105 -74713207 + ID_B1 SINE B4 78 156 -68 1 932 256 318 0 0 chr13 45571048 45571111 -74713201 + PB1D10 SINE Alu 19 81 -36 1 932 333 305 35 111 chr13 45571128 45571327 -74712985 + L1MD LINE L1 5488 5671 -688 1 932 231 183 52 31 chr13 45571936 45572032 -74712280 + (TA)n Simple_repeat Simple_repeat 1 98 0 1 932 370 198 63 46 chr13 45572170 45572345 -74711967 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 1 932 806 106 8 0 chr13 45573321 45573453 -74710859 + (TG)n Simple_repeat Simple_repeat 2 134 0 1 932 223 250 0 0 chr13 45573510 45573550 -74710762 - ID SINE ID -139 85 46 1 932 1403 143 66 235 chr13 45573595 45573910 -74710402 + ORR1C2 LTR MaLR 4 234 -150 1 932 252 0 0 0 chr13 45573910 45573938 -74710374 + (CCTG)n Simple_repeat Simple_repeat 3 30 0 1 932 1403 143 66 235 chr13 45573938 45574078 -74710234 + ORR1C2 LTR MaLR 235 381 -3 1 932 212 352 64 9 chr13 45574659 45574768 -74709544 + MIRc SINE MIR 19 133 -135 1 932 33 43 0 0 chr13 45574768 45574815 -74709497 + AT_rich Low_complexity Low_complexity 1 47 0 1 932 423 221 146 42 chr13 45574877 45574993 -74709319 - PB1 SINE Alu 0 149 25 1 932 353 198 10 0 chr13 45575026 45575122 -74709190 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 932 399 231 179 16 chr13 45575745 45575868 -74708444 + MLT1A LTR MaLR 23 165 -225 1 932 1129 148 11 6 chr13 45575871 45576048 -74708264 - URR1B DNA MER1_type -3 222 45 1 932 459 267 93 41 chr13 45576058 45576085 -74708227 + MLT1A LTR MaLR 149 180 -194 1 932 627 51 0 0 chr13 45576085 45576164 -74708148 + (TC)n Simple_repeat Simple_repeat 1 79 0 1 932 459 273 93 38 chr13 45576164 45576321 -74707991 + MLT1A LTR MaLR 181 375 -33 1 932 349 282 146 6 chr13 45576335 45576499 -74707813 + Charlie2b DNA MER1_type 1 187 -2595 1 932 267 203 0 0 chr13 45576751 45576810 -74707502 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 932 307 200 176 11 chr13 45577218 45577309 -74707003 + Charlie2b DNA MER1_type 1926 2031 -751 1 932 1319 75 5 79 chr13 45577615 45577817 -74706495 - B2_Mm1a SINE B2 -4 189 3 1 932 294 309 9 43 chr13 45577842 45577957 -74706355 + Charlie2b DNA MER1_type 2050 2160 -622 1 932 594 0 0 0 chr13 45577990 45578056 -74706256 + (TC)n Simple_repeat Simple_repeat 1 66 0 1 932 443 297 114 6 chr13 45578120 45578286 -74706026 - MT2A LTR ERVL 0 533 350 1 932 192 77 0 0 chr13 45578505 45578531 -74705781 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 932 327 25 0 0 chr13 45578532 45578572 -74705740 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1 932 421 237 72 0 chr13 45578588 45578685 -74705627 - B1F SINE Alu -35 114 11 1 932 1054 184 68 0 chr13 45579207 45579368 -74704944 - URR1A DNA MER1_type -2 224 62 1 932 2083 103 0 122 chr13 45579368 45579722 -74704590 + RLTR10E LTR ERVK 1 311 0 1 932 1054 184 68 0 chr13 45579722 45579766 -74704546 - URR1A DNA MER1_type -165 61 7 1 932 342 284 12 0 chr13 45579811 45579892 -74704420 - B1F1 SINE Alu -66 83 2 1 932 362 286 22 67 chr13 45579939 45580074 -74704238 + B4A SINE B4 3 131 -161 1 932 231 291 88 26 chr13 45580312 45580425 -74703887 + LTR33A_ LTR ERVL 176 295 -236 1 932 303 270 70 113 chr13 45580398 45580540 -74703772 + MLT1A1 LTR MaLR 272 407 -1 1 932 727 231 166 29 chr13 45581028 45581269 -74703043 + B4A SINE B4 2 275 -17 1 932 262 254 159 0 chr13 45581346 45581409 -74702903 + MER47B DNA MER2_type 173 245 -173 1 932 443 303 92 0 chr13 45581433 45581575 -74702737 - Lx8 LINE L1 -496 6977 6823 1 932 451 327 152 103 chr13 45581718 45582059 -74702253 + MTE2a LTR MaLR 22 379 0 1 932 608 288 84 0 chr13 45582074 45582265 -74702047 + LTR16A LTR ERVL 24 230 -221 1 932 356 261 97 26 chr13 45582344 45582458 -74701854 + LTR16A LTR ERVL 330 451 0 1 932 1326 110 16 10 chr13 45582468 45582661 -74701651 + B2_Mm2 SINE B2 2 195 0 1 932 285 146 0 0 chr13 45582690 45582738 -74701574 + (GGAA)n Simple_repeat Simple_repeat 3 50 0 1 932 314 326 88 65 chr13 45582738 45583000 -74701312 + L1M5 LINE L1 4146 4413 -1733 1 932 1529 317 77 52 chr13 45583004 45584240 -74700072 + L1_Mur3 LINE L1 4614 5880 0 1 932 303 230 0 0 chr13 45584270 45584357 -74699955 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 932 252 0 0 0 chr13 45584504 45584532 -74699780 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 932 403 329 60 68 chr13 45584755 45585006 -74699306 + ORR1E LTR MaLR 3 251 -108 1 932 1168 64 0 0 chr13 45585078 45585218 -74699094 - B1_Mus1 SINE Alu -7 141 2 1 932 540 0 0 0 chr13 45585221 45585281 -74699031 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 932 243 289 11 43 chr13 45585625 45585719 -74698593 - MLT1A1 LTR MaLR 0 408 318 2 932 1880 233 47 32 chr13 45586037 45586530 -74697782 - RLTR11A2 LTR ERVK -27 500 1 2 932 204 97 0 0 chr13 45586567 45586598 -74697714 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 932 253 339 137 17 chr13 45586620 45586737 -74697575 - ID_B1 SINE B4 -10 214 84 2 932 26 30 0 0 chr13 45586876 45586909 -74697403 + AT_rich Low_complexity Low_complexity 1 33 0 2 932 26 50 0 0 chr13 45586971 45587011 -74697301 + AT_rich Low_complexity Low_complexity 1 40 0 2 932 386 259 71 9 chr13 45587479 45587501 -74696811 - B3 SINE B2 -28 188 165 2 932 245 91 0 43 chr13 45587501 45587547 -74696765 + (TATG)n Simple_repeat Simple_repeat 3 46 0 2 932 386 241 28 81 chr13 45587547 45587649 -74696663 - B3 SINE B2 -52 164 58 2 932 202 302 23 53 chr13 45587658 45587736 -74696576 + polypurine Low_complexity Low_complexity 2 77 0 2 932 468 0 0 0 chr13 45587736 45587788 -74696524 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 932 202 302 23 53 chr13 45587788 45587842 -74696470 + polypurine Low_complexity Low_complexity 78 130 0 2 932 915 144 19 117 chr13 45587842 45588047 -74696265 - ORR1C2 LTR MaLR -199 185 1 2 932 22 70 0 0 chr13 45588298 45588341 -74695971 + AT_rich Low_complexity Low_complexity 1 43 0 2 932 30 27 0 0 chr13 45588523 45588560 -74695752 + AT_rich Low_complexity Low_complexity 1 37 0 2 932 389 274 70 31 chr13 45588582 45588710 -74695602 - RSINE1 SINE B4 -31 134 2 2 932 787 371 34 43 chr13 45588786 45589349 -74694963 - MER82 DNA MER2_type -43 610 53 2 932 396 0 0 0 chr13 45590015 45590059 -74694253 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 932 180 111 0 0 chr13 45590059 45590086 -74694226 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 932 1064 230 180 117 chr13 45590087 45590527 -74693785 - MT2A LTR ERVL -79 454 1 2 932 379 235 12 12 chr13 45590534 45590616 -74693696 - B4A SINE B4 -208 84 3 2 932 355 176 15 0 chr13 45590784 45590852 -74693460 + ID4_ SINE ID 5 73 -10 2 932 863 263 5 0 chr13 45590922 45591131 -74693181 - B3 SINE B2 -5 211 2 2 932 1135 254 72 90 chr13 45591183 45591559 -74692753 - MTE2a LTR MaLR -8 371 3 2 932 11124 124 45 63 chr13 45591666 45591795 -74692517 - L1_Mur3 LINE L1 -2264 3616 3459 2 932 342 0 0 0 chr13 45591795 45591833 -74692479 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 932 11124 124 45 63 chr13 45591833 45592298 -74692014 - L1_Mur3 LINE L1 -2422 3458 3007 2 932 1553 62 0 5 chr13 45592298 45592492 -74691820 - B2_Mm2 SINE B2 0 195 3 2 932 11124 140 49 46 chr13 45592492 45595012 -74689300 - L1_Mur3 LINE L1 -2874 3006 243 2 932 180 314 39 0 chr13 45595018 45595069 -74689243 + MIR SINE MIR 205 257 -5 2 932 377 257 5 0 chr13 45595347 45595434 -74688878 - PB1D10 SINE Alu -35 92 3 2 932 295 240 63 51 chr13 45595461 45595540 -74688772 - ID4_ SINE ID -1 82 3 2 932 288 0 0 0 chr13 45595577 45595609 -74688703 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 932 232 370 79 26 chr13 45595612 45595801 -74688511 + MamGypLTR1a LTR Gypsy 105 303 -481 2 932 2233 151 8 8 chr13 45595901 45596255 -74688057 - ORR1B1 LTR MaLR 0 394 41 2 932 2139 167 66 25 chr13 45596292 45596685 -74687627 - MTC LTR MaLR -5 416 8 2 932 227 200 0 0 chr13 45597607 45597657 -74686655 + A-rich Low_complexity Low_complexity 1 50 0 2 932 382 267 127 49 chr13 45597791 45597933 -74686379 + RSINE1 SINE B4 3 155 -10 2 932 941 24 0 124 chr13 45597953 45598098 -74686214 + B1_Mus1 SINE Alu 22 148 0 2 932 270 81 0 0 chr13 45598100 45598137 -74686175 + (GAAAA)n Simple_repeat Simple_repeat 3 39 0 2 932 1510 187 371 13 chr13 45598418 45598868 -74685444 - RMER19C LTR ERVK 0 611 1 2 932 225 217 22 0 chr13 45599150 45599196 -74685116 - RMER15 LTR ERVL -524 51 5 2 932 1136 82 0 13 chr13 45599250 45599399 -74684913 - B1_Mus1 SINE Alu 0 148 2 2 932 1320 201 124 91 chr13 45600011 45600250 -74684062 + ORR1D1 LTR MaLR 1 211 -163 2 932 207 0 0 0 chr13 45600250 45600273 -74684039 + (CCTG)n Simple_repeat Simple_repeat 4 26 0 2 932 1320 201 124 91 chr13 45600273 45600395 -74683917 + ORR1D1 LTR MaLR 212 373 -1 2 932 2161 138 3 29 chr13 45600534 45600884 -74683428 + MTC LTR MaLR 74 414 -7 2 932 459 0 0 0 chr13 45600895 45600946 -74683366 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2 932 710 153 46 53 chr13 45600946 45601077 -74683235 - B1_Mur2 SINE Alu -11 138 9 2 932 231 36 0 0 chr13 45601204 45601232 -74683080 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 2 932 1248 145 283 48 chr13 45601525 45601836 -74682476 - ORR1C2 LTR MaLR 0 384 1 2 932 250 238 95 0 chr13 45601839 45601902 -74682410 - RMER10A LTR ERVL -62 380 312 2 932 716 152 127 15 chr13 45602396 45602530 -74681782 + B1_Mur2 SINE Alu 1 149 0 2 932 288 130 0 0 chr13 45603620 45603666 -74680646 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 2 932 936 238 6 151 chr13 45605471 45605808 -74678504 - B4 SINE B4 -3 289 2 2 932 318 50 0 0 chr13 45605814 45605854 -74678458 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 932 796 290 115 54 chr13 45606148 45606575 -74677737 - MLT1C LTR MaLR -14 453 1 2 932 366 371 57 0 chr13 45606887 45607062 -74677250 + MER115 DNA Tip100 161 345 -348 2 932 215 291 0 0 chr13 45607727 45607782 -74676530 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 932 581 270 191 38 chr13 45608426 45608661 -74675651 - B4 SINE B4 -1 291 21 2 932 232 320 121 98 chr13 45608735 45608908 -74675404 - LTR33A_ LTR ERVL -251 280 104 2 932 281 239 169 116 chr13 45610163 45610373 -74673939 - MIR SINE MIR -20 248 24 2 932 467 346 68 85 chr13 45610908 45611262 -74673050 + ORR1E LTR MaLR 1 348 -11 2 932 371 262 26 86 chr13 45611599 45611716 -74672596 - PB1D10 SINE Alu -7 110 1 2 932 302 252 88 53 chr13 45612742 45612855 -74671457 + L1MB7 LINE L1 5444 5560 -614 2 116 1671 178 161 0 chr13 45612883 45613238 -74671074 + MTC LTR MaLR 10 421 0 2 933 625 270 111 46 chr13 45613248 45613528 -74670784 + L1MB7 LINE L1 5601 5898 -286 2 933 266 273 62 18 chr13 45613650 45613762 -74670550 + PB1D10 SINE Alu 1 117 0 2 933 228 67 0 0 chr13 45613862 45613892 -74670420 + (GGGA)n Simple_repeat Simple_repeat 3 32 0 2 933 1858 199 67 30 chr13 45613975 45614379 -74669933 - MTD LTR MaLR 0 419 1 2 933 466 286 91 41 chr13 45614721 45614918 -74669394 - MER2 DNA MER2_type -29 316 110 2 933 901 206 49 54 chr13 45614949 45615154 -74669158 - B3 SINE B2 -12 204 1 2 933 901 197 82 32 chr13 45615187 45615407 -74668905 - MTE2b LTR MaLR 0 379 149 2 933 486 215 130 8 chr13 45615516 45615647 -74668665 - MTE2b LTR MaLR -214 165 19 2 933 244 177 0 114 chr13 45617199 45617269 -74667043 + ORR1D2 LTR MaLR 307 368 -2 2 933 2500 164 88 22 chr13 45617418 45617918 -74666394 - RMER16 LTR ERVK 0 533 1 2 933 579 272 181 11 chr13 45618142 45618402 -74665910 + MER21B LTR ERV1 432 735 -128 2 933 1242 40 0 13 chr13 45618976 45619126 -74665186 - B1_Mus1 SINE Alu 0 148 1 2 933 546 231 245 22 chr13 45619970 45620259 -74664053 - MLT1A0 LTR MaLR -12 353 2 2 933 481 244 85 43 chr13 45620383 45620618 -74663694 - RLTR15 LTR ERVK -67 292 48 2 933 970 236 86 22 chr13 45620962 45621231 -74663081 + B4 SINE B4 3 288 -4 2 933 1008 114 0 0 chr13 45621239 45621441 -74662871 + (TC)n Simple_repeat Simple_repeat 1 202 0 2 933 345 62 0 0 chr13 45621441 45621488 -74662824 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 933 249 306 48 0 chr13 45622381 45622443 -74661869 - ID4_ SINE ID -16 67 3 2 933 349 346 0 9 chr13 45622463 45622571 -74661741 - PB1D10 SINE Alu -8 109 3 2 933 1228 165 4 86 chr13 45626781 45627026 -74657286 + URR1A DNA MER1_type 2 226 0 2 933 300 275 25 0 chr13 45627843 45627923 -74656389 - MLT1B LTR MaLR -291 99 18 2 933 485 32 16 0 chr13 45628849 45628912 -74655400 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 2 933 996 282 77 11 chr13 45628919 45629206 -74655106 - MER2 DNA MER2_type 0 345 40 2 933 327 85 0 0 chr13 45629297 45629344 -74654968 + (CCCA)n Simple_repeat Simple_repeat 1 47 0 2 933 216 338 57 50 chr13 45629442 45629601 -74654711 - L3 LINE CR1 -659 3830 3671 2 933 1141 140 20 15 chr13 45629845 45630041 -74654271 - URR1A DNA MER1_type 0 226 30 2 933 297 0 0 0 chr13 45630097 45630130 -74654182 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 933 306 0 0 0 chr13 45630340 45630374 -74653938 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 933 525 220 125 13 chr13 45630424 45630576 -74653736 - RMER15 LTR ERVL -1 574 406 2 933 189 0 0 0 chr13 45630576 45630597 -74653715 + (TG)n Simple_repeat Simple_repeat 1 21 0 2 933 705 316 32 28 chr13 45631119 45631370 -74652942 - B4 SINE B4 -40 252 1 2 933 1039 156 79 16 chr13 45631873 45632062 -74652250 - B3 SINE B2 -13 203 3 2 933 327 258 88 111 chr13 45632335 45632626 -74651686 - RSINE1 SINE B4 -19 273 9 2 933 487 130 58 23 chr13 45632964 45633137 -74651175 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 933 221 325 12 48 chr13 45633143 45633176 -74651136 - ID_B1 SINE B4 -53 171 91 2 933 240 274 0 0 chr13 45633176 45633227 -74651085 - B1F2 SINE Alu -89 60 10 2 933 222 235 0 19 chr13 45633328 45633380 -74650932 + PB1D10 SINE Alu 11 61 -56 2 933 214 275 72 0 chr13 45633380 45633397 -74650915 + B4A SINE B4 96 169 -123 2 933 382 182 136 0 chr13 45635122 45635210 -74649102 - RSINE1 SINE B4 -63 102 3 2 933 1104 68 0 52 chr13 45635779 45635934 -74648378 + B1_Mm SINE Alu 1 147 0 3 933 4472 131 28 32 chr13 45636196 45636953 -74647359 + RMER6A LTR ERVK 3 756 0 3 933 871 205 131 15 chr13 45637343 45637541 -74646771 - ID_B1 SINE B4 -1 223 3 3 933 450 269 44 7 chr13 45640858 45640993 -74643319 + Lx8 LINE L1 7148 7287 -186 3 933 189 0 0 0 chr13 45641957 45641978 -74642334 + (A)n Simple_repeat Simple_repeat 1 21 0 3 933 358 212 14 31 chr13 45642160 45642244 -74642068 - PB1D10 SINE Alu -5 144 45 3 933 556 290 143 81 chr13 45642843 45643200 -74641112 - MTEa LTR MaLR 0 379 1 3 933 221 229 20 20 chr13 45644427 45644476 -74639836 - B1F SINE Alu -23 126 78 3 933 205 27 81 0 chr13 45647012 45647049 -74637263 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 3 933 22 0 0 0 chr13 45647138 45647160 -74637152 + AT_rich Low_complexity Low_complexity 1 22 0 3 933 203 88 29 0 chr13 45647924 45647958 -74636354 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 3 933 327 25 0 0 chr13 45649761 45649801 -74634511 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 933 225 0 0 0 chr13 45649885 45649910 -74634402 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 933 21 0 0 0 chr13 45649980 45650001 -74634311 + AT_rich Low_complexity Low_complexity 1 21 0 3 933 213 39 0 0 chr13 45651118 45651144 -74633168 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 3 933 186 133 0 0 chr13 45651330 45651360 -74632952 + (GAAA)n Simple_repeat Simple_repeat 4 33 0 3 933 332 101 0 42 chr13 45651688 45651760 -74632552 + (A)n Simple_repeat Simple_repeat 1 69 0 3 933 362 277 0 41 chr13 45653109 45653207 -74631105 - Lx8 LINE L1 -142 7331 7238 3 933 586 233 36 83 chr13 45653223 45653415 -74630897 + Lx8 LINE L1 6893 7075 -398 3 933 649 251 87 77 chr13 45653441 45653553 -74630759 - B4 SINE B4 -83 209 87 3 933 387 0 0 0 chr13 45653553 45653596 -74630716 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 933 432 0 0 0 chr13 45653596 45653643 -74630669 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 933 1055 78 0 0 chr13 45653644 45653773 -74630539 - B1_Mus1 SINE Alu -19 129 1 3 933 649 251 87 77 chr13 45653773 45653864 -74630448 - B4 SINE B4 -206 86 2 3 933 874 266 29 16 chr13 45654627 45654872 -74629440 + Lx8 LINE L1 6868 7115 -358 3 933 201 322 85 34 chr13 45655487 45655664 -74628648 + L2 LINE L2 2522 2707 -712 3 933 375 41 0 0 chr13 45655737 45655786 -74628526 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 933 242 259 41 10 chr13 45656925 45657005 -74627307 + B1F SINE Alu 34 119 -1 3 933 399 210 180 0 chr13 45657108 45657208 -74627104 - PB1 SINE Alu -2 125 8 3 933 708 275 85 27 chr13 45658901 45659159 -74625153 + B4A SINE B4 2 274 -18 3 933 501 251 17 22 chr13 45659524 45659703 -74624609 + (CA)n Simple_repeat Simple_repeat 2 179 0 3 933 474 211 17 0 chr13 45659715 45659890 -74624422 + (CA)n Simple_repeat Simple_repeat 1 178 0 3 933 672 231 15 7 chr13 45661412 45661483 -74622829 + ID SINE ID 10 81 -143 3 933 264 312 25 51 chr13 45661483 45661601 -74622711 + PB1 SINE Alu 1 115 -12 3 933 288 0 0 0 chr13 45661786 45661818 -74622494 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 933 378 0 0 0 chr13 45663951 45663993 -74620319 + (GGA)n Simple_repeat Simple_repeat 2 43 0 3 933 701 325 14 14 chr13 45664244 45664456 -74619856 - B3 SINE B2 -1 215 4 3 933 532 264 57 0 chr13 45664574 45664714 -74619598 - ID_B1 SINE B4 0 224 77 3 933 258 279 67 44 chr13 45665119 45665209 -74619103 + ID_B1 SINE B4 78 169 -55 3 933 355 317 50 0 chr13 45665132 45665233 -74619079 + PB1D7 SINE Alu 10 115 -5 3 933 463 243 0 36 chr13 45665759 45665870 -74618442 + PB1D10 SINE Alu 1 107 -10 3 933 299 121 17 0 chr13 45665884 45665942 -74618370 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 3 933 315 0 0 0 chr13 45666123 45666158 -74618154 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 933 297 281 16 0 chr13 45666164 45666228 -74618084 - RSINE1 SINE B4 -19 146 82 3 933 210 37 0 0 chr13 45666871 45666898 -74617414 + (A)n Simple_repeat Simple_repeat 1 27 0 3 933 745 214 178 11 chr13 45666987 45667167 -74617145 - B3 SINE B2 -5 211 2 3 933 241 338 0 0 chr13 45667698 45667766 -74616546 - BC1_Mm scRNA scRNA -69 83 16 3 933 240 35 0 0 chr13 45667957 45667986 -74616326 + (TTA)n Simple_repeat Simple_repeat 2 30 0 3 933 473 218 10 10 chr13 45668004 45668106 -74616206 - RSINE1 SINE B4 -61 104 3 3 933 26 50 0 0 chr13 45668398 45668438 -74615874 + AT_rich Low_complexity Low_complexity 1 40 0 3 933 543 243 84 73 chr13 45668570 45668761 -74615551 + RMER30 DNA MER1_type 8 200 -2 3 933 398 339 152 18 chr13 45669780 45670062 -74614250 + L3 LINE CR1 3519 3838 -651 3 933 656 232 14 21 chr13 45670063 45670208 -74614104 - ID_B1 SINE B4 0 224 81 3 933 213 250 15 45 chr13 45670610 45670677 -74613635 + B1F2 SINE Alu 2 66 -83 3 933 825 164 170 17 chr13 45671126 45671361 -74612951 - Lx9 LINE L1 -7 7637 7367 3 933 417 138 0 0 chr13 45672289 45672368 -74611944 + (TC)n Simple_repeat Simple_repeat 2 80 0 3 933 306 0 0 0 chr13 45672368 45672402 -74611910 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 933 417 138 0 0 chr13 45672402 45672409 -74611903 + (TC)n Simple_repeat Simple_repeat 1 7 0 3 933 719 241 123 36 chr13 45673896 45674224 -74610088 + ORR1E LTR MaLR 1 379 0 3 933 738 261 124 75 chr13 45674814 45675079 -74609233 - B4 SINE B4 0 292 15 3 933 326 326 79 49 chr13 45675345 45675548 -74608764 + L1M5 LINE L1 5432 5640 -534 3 933 1105 215 87 83 chr13 45675559 45675848 -74608464 + MTEb LTR MaLR 3 292 -87 3 933 370 170 26 51 chr13 45675897 45676026 -74608286 + L1M5 LINE L1 5659 5784 -405 3 933 332 59 20 0 chr13 45676343 45676394 -74607918 + (TTTTTG)n Simple_repeat Simple_repeat 3 54 0 3 933 1211 42 14 0 chr13 45676395 45676539 -74607773 - B1_Mm SINE Alu 0 147 2 3 933 416 250 48 170 chr13 45676754 45676942 -74607370 + RSINE1 SINE B4 1 165 0 3 933 885 27 9 0 chr13 45677228 45677338 -74606974 + B1_Mm SINE Alu 37 147 0 3 933 701 286 26 11 chr13 45678495 45678686 -74605626 + B3A SINE B2 2 195 -3 3 933 847 309 43 8 chr13 45678718 45678953 -74605359 + B4 SINE B4 2 244 -48 3 933 252 256 106 28 chr13 45679143 45679267 -74605045 + MIR SINE MIR 21 153 -123 3 933 441 171 0 0 chr13 45679631 45679719 -74604593 + (TA)n Simple_repeat Simple_repeat 2 89 0 3 933 363 279 0 0 chr13 45679730 45679966 -74604346 + (CA)n Simple_repeat Simple_repeat 1 236 0 3 933 337 259 34 23 chr13 45680410 45680530 -74603782 - MLT1A1 LTR MaLR -15 393 270 3 933 518 144 25 17 chr13 45680872 45680992 -74603320 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 3 933 201 267 100 0 chr13 45681250 45681310 -74603002 + MIRb SINE MIR 109 174 -94 3 933 1384 71 22 0 chr13 45681661 45681844 -74602468 + B2_Mm2 SINE B2 2 188 -7 3 933 375 274 0 10 chr13 45682114 45682210 -74602102 + CT-rich Low_complexity Low_complexity 3 97 0 3 933 406 271 47 0 chr13 45682236 45682343 -74601969 - PB1D7 SINE Alu -8 112 1 3 933 790 246 41 16 chr13 45683513 45683707 -74600605 + ID_B1 SINE B4 22 220 -4 3 933 1123 235 128 35 chr13 45683707 45684020 -74600292 + MTEb LTR MaLR 38 379 0 3 933 1077 284 66 13 chr13 45684315 45684364 -74599948 - MTE2b LTR MaLR -58 321 268 3 933 1058 87 23 0 chr13 45684364 45684537 -74599775 + (TG)n Simple_repeat Simple_repeat 1 177 0 3 933 1077 284 66 13 chr13 45684537 45684790 -74599522 - MTE2b LTR MaLR -112 267 3 3 933 334 184 35 106 chr13 45684790 45684872 -74599440 - B4 SINE B4 -213 79 4 3 933 575 235 118 43 chr13 45685634 45685821 -74598491 - B3 SINE B2 0 216 16 3 933 382 264 75 9 chr13 45685969 45686076 -74598236 - ID_B1 SINE B4 -21 203 90 3 933 671 258 41 26 chr13 45686087 45686282 -74598030 - B3 SINE B2 0 216 19 3 933 187 279 65 74 chr13 45686401 45686520 -74597792 - MIR SINE MIR -122 146 34 3 933 455 224 12 0 chr13 45686775 45686860 -74597452 + B4A SINE B4 1 86 -206 3 933 366 134 0 0 chr13 45686860 45686927 -74597385 + (CCAA)n Simple_repeat Simple_repeat 4 70 0 3 933 445 193 0 0 chr13 45687019 45687107 -74597205 + RMER12 LTR ERVK 768 855 -467 3 933 443 323 8 39 chr13 45687082 45687211 -74597101 - RSINE1 SINE B4 0 165 41 3 933 668 292 133 78 chr13 45688148 45688404 -74595908 - B4 SINE B4 -22 270 1 3 933 551 314 43 47 chr13 45688425 45688682 -74595630 + MER2 DNA MER2_type 87 342 -3 3 933 220 288 30 0 chr13 45688723 45688789 -74595523 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 3 933 306 67 0 0 chr13 45688870 45688915 -74595397 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 933 1141 68 7 0 chr13 45688922 45689068 -74595244 - B1_Mus1 SINE Alu 0 148 2 3 933 244 221 35 96 chr13 45690870 45690985 -74593327 - ORR1E LTR MaLR 0 370 263 3 933 317 278 9 44 chr13 45692071 45692184 -74592128 - PB1D10 SINE Alu -8 109 1 3 933 424 240 0 0 chr13 45692235 45692310 -74592002 - ID4_ SINE ID -4 79 5 3 933 429 244 9 0 chr13 45692534 45692627 -74591685 + PB1D10 SINE Alu 13 112 -37 3 933 1096 157 9 83 chr13 45692648 45692864 -74591448 - URR1B DNA MER1_type -25 200 1 3 933 350 296 33 71 chr13 45692704 45692869 -74591443 + CYRA11_Mm Unknown Y-chromosome 235 392 -225 3 933 254 195 0 0 chr13 45692869 45692910 -74591402 + ID4_ SINE ID 1 41 -42 3 933 23 33 0 0 chr13 45692975 45693005 -74591307 + AT_rich Low_complexity Low_complexity 1 30 0 3 933 332 289 0 13 chr13 45693315 45693392 -74590920 - PB1 SINE Alu -9 118 43 4 933 302 309 0 0 chr13 45694695 45694776 -74589536 + B4 SINE B4 4 84 -208 4 933 423 155 0 0 chr13 45694777 45694861 -74589451 + (CCAA)n Simple_repeat Simple_repeat 1 84 0 4 933 486 270 170 0 chr13 45694863 45695013 -74589299 + B4 SINE B4 98 282 -10 4 933 393 22 0 0 chr13 45695018 45695064 -74589248 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 933 186 167 0 0 chr13 45695070 45695106 -74589206 + GA-rich Low_complexity Low_complexity 4 39 0 4 933 291 298 108 30 chr13 45695975 45696141 -74588171 + ORR1E LTR MaLR 19 197 -162 4 933 292 316 313 0 chr13 45696337 45696487 -74587825 - ID_B1 SINE B4 -26 198 2 4 933 281 26 26 0 chr13 45696498 45696536 -74587776 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 933 1176 63 0 0 chr13 45696538 45696680 -74587632 - B1_Mus1 SINE Alu -6 142 1 4 933 868 239 5 27 chr13 45697319 45697504 -74586808 + ID_B1 SINE B4 2 182 -42 4 933 663 252 156 70 chr13 45697496 45697580 -74586732 + B4 SINE B4 29 119 -173 4 933 372 43 0 0 chr13 45697580 45697626 -74586686 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 933 663 252 156 70 chr13 45697626 45697784 -74586528 + B4 SINE B4 120 292 0 4 933 243 0 0 0 chr13 45698212 45698239 -74586073 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 4 933 485 298 52 77 chr13 45698254 45698487 -74585825 - B4A SINE B4 -52 240 14 4 933 29 0 0 0 chr13 45698846 45698875 -74585437 + AT_rich Low_complexity Low_complexity 1 29 0 4 933 742 203 181 5 chr13 45699088 45699276 -74585036 - ID_B1 SINE B4 -2 222 2 4 933 534 348 60 88 chr13 45700449 45700997 -74583315 + MT2A LTR ERVL 1 533 0 4 933 366 224 89 45 chr13 45701790 45701902 -74582410 + PB1D10 SINE Alu 1 117 0 4 933 752 291 152 0 chr13 45701909 45702153 -74582159 + B4 SINE B4 5 285 -7 4 933 646 243 21 0 chr13 45702210 45702354 -74581958 + B1F1 SINE Alu 2 148 -1 4 933 423 0 0 0 chr13 45702408 45702455 -74581857 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 4 933 381 199 36 0 chr13 45702463 45702629 -74581683 + (TA)n Simple_repeat Simple_repeat 2 173 0 4 933 181 224 152 38 chr13 45703355 45703434 -74580878 + L3 LINE CR1 2084 2171 -2318 4 933 268 320 48 39 chr13 45703697 45703801 -74580511 - ORR1E LTR MaLR -1 378 274 4 933 252 342 19 19 chr13 45703842 45703997 -74580315 + RSINE1 SINE B4 5 159 -6 4 933 709 267 68 0 chr13 45704045 45704221 -74580091 - ORR1E LTR MaLR -171 188 1 4 933 323 175 25 0 chr13 45704263 45704343 -74579969 + CT-rich Low_complexity Low_complexity 3 84 0 4 933 549 0 0 0 chr13 45705527 45705588 -74578724 + (CAAAC)n Simple_repeat Simple_repeat 2 62 0 4 933 450 214 80 20 chr13 45705603 45705703 -74578609 - B1F SINE Alu -40 109 4 4 933 356 232 25 51 chr13 45705703 45705715 -74578597 - MT2B2 LTR ERVL -315 238 155 4 933 21 0 0 0 chr13 45706046 45706067 -74578245 + AT_rich Low_complexity Low_complexity 1 21 0 4 933 657 233 7 33 chr13 45706262 45706413 -74577899 + B1_Mur1 SINE Alu 1 147 -2 4 933 1570 217 5 94 chr13 45706553 45706959 -74577353 - ORR1D2 LTR MaLR 0 370 1 4 933 806 289 81 15 chr13 45707076 45707336 -74576976 + MLT1A0 LTR MaLR 87 363 -2 4 933 210 37 0 0 chr13 45707716 45707743 -74576569 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 933 183 296 112 56 chr13 45707812 45707955 -74576357 - L2c LINE L2 -260 3127 2977 4 933 189 351 117 38 chr13 45708345 45708585 -74575727 - MIRc SINE MIR -4 264 6 4 933 197 344 19 66 chr13 45708712 45708818 -74575494 - MIRm SINE MIR 0 276 176 4 933 772 226 160 0 chr13 45709752 45709933 -74574379 - B3 SINE B2 -6 210 1 4 933 603 299 65 67 chr13 45710474 45710865 -74573447 + MLT1C LTR MaLR 23 385 -5 4 933 202 185 54 36 chr13 45712268 45712324 -74571988 + CT-rich Low_complexity Low_complexity 3 59 0 4 933 206 175 50 0 chr13 45712269 45712309 -74572003 + C-rich Low_complexity Low_complexity 2 43 0 4 933 911 232 106 85 chr13 45712366 45712386 -74571926 - B4A SINE B4 -2 290 271 4 933 186 43 0 0 chr13 45712386 45712409 -74571903 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 933 911 232 106 85 chr13 45712409 45712671 -74571641 - B4A SINE B4 -22 270 3 4 933 454 273 43 54 chr13 45713585 45713771 -74570541 + ID_B1 SINE B4 2 185 -39 4 933 670 291 63 148 chr13 45714512 45714830 -74569482 + B4 SINE B4 2 292 0 4 933 530 298 5 55 chr13 45715221 45715420 -74568892 - B3A SINE B2 -9 189 1 4 933 181 186 51 0 chr13 45716635 45716694 -74567618 + GA-rich Low_complexity Low_complexity 3 64 0 4 933 320 41 41 0 chr13 45716952 45717001 -74567311 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 4 933 270 0 0 0 chr13 45717002 45717032 -74567280 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 933 302 312 149 82 chr13 45717080 45717408 -74566904 + ORR1D1 LTR MaLR 19 368 -6 4 933 205 328 76 46 chr13 45717710 45717799 -74566513 + MER5A DNA MER1_type 54 141 -48 4 933 253 47 47 0 chr13 45717799 45717842 -74566470 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 4 933 205 328 76 46 chr13 45717842 45717883 -74566429 + MER5A DNA MER1_type 142 188 -1 4 933 499 266 51 13 chr13 45718622 45718778 -74565534 + MER5A DNA MER1_type 2 163 -26 4 933 1692 222 57 5 chr13 45718827 45719212 -74565100 - MTD LTR MaLR -14 405 1 4 933 316 178 32 65 chr13 45719307 45719493 -74564819 + (ATG)n Simple_repeat Simple_repeat 1 180 0 4 933 396 279 206 16 chr13 45720675 45720864 -74563448 + MER63C DNA AcHobo 1 225 -705 4 933 324 0 0 0 chr13 45721030 45721066 -74563246 + (TTA)n Simple_repeat Simple_repeat 3 38 0 4 933 224 333 137 8 chr13 45721291 45721415 -74562897 - MIRb SINE MIR -59 209 70 4 933 367 314 73 0 chr13 45721929 45722066 -74562246 + MER2 DNA MER2_type 97 243 -102 4 933 192 179 0 0 chr13 45722167 45722206 -74562106 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 933 234 204 36 18 chr13 45722361 45722416 -74561896 + (CATA)n Simple_repeat Simple_repeat 4 59 0 4 933 264 329 66 0 chr13 45723432 45723508 -74560804 + MER20 DNA MER1_type 6 86 -133 4 933 432 0 0 0 chr13 45723576 45723624 -74560688 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 933 293 255 25 117 chr13 45724597 45724717 -74559595 - PB1D7 SINE Alu 0 120 12 4 933 3114 61 48 2 chr13 45724795 45725237 -74559075 - MT2C_Mm LTR ERVL -13 462 1 4 933 252 59 0 0 chr13 45725576 45725610 -74558702 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 933 1146 75 0 0 chr13 45725610 45725756 -74558556 - B1_Mus1 SINE Alu -2 146 1 4 933 396 218 0 13 chr13 45727416 45727495 -74556817 + ID_B1 SINE B4 145 222 -2 4 933 741 226 69 19 chr13 45728052 45728268 -74556044 - MER2 DNA MER2_type -33 312 86 4 933 208 326 10 10 chr13 45728359 45728455 -74555857 + (TA)n Simple_repeat Simple_repeat 1 96 0 4 933 254 239 15 15 chr13 45728503 45728571 -74555741 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 4 933 843 127 17 0 chr13 45728790 45728963 -74555349 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 4 933 433 256 26 0 chr13 45728968 45729085 -74555227 - PB1D9 SINE Alu 0 120 1 4 933 444 245 29 0 chr13 45729091 45729193 -74555119 - PB1D10 SINE Alu 0 117 13 4 933 522 233 5 124 chr13 45730276 45730477 -74553835 + MTEa LTR MaLR 203 379 0 4 933 453 299 11 97 chr13 45730713 45730898 -74553414 - B4A SINE B4 -122 170 2 4 933 496 268 38 149 chr13 45731764 45732080 -74552232 + B4A SINE B4 2 282 -10 4 933 1494 33 0 0 chr13 45732356 45732536 -74551776 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 933 21 0 0 0 chr13 45732736 45732757 -74551555 + AT_rich Low_complexity Low_complexity 1 21 0 4 933 769 164 71 0 chr13 45733430 45733570 -74550742 - B1_Mur4 SINE Alu 0 150 1 4 933 482 172 0 10 chr13 45733634 45733734 -74550578 + CT-rich Low_complexity Low_complexity 2 100 0 4 933 673 302 29 26 chr13 45734792 45735064 -74549248 + B4A SINE B4 2 274 -18 4 933 180 97 0 0 chr13 45735065 45735096 -74549216 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 4 933 252 0 0 0 chr13 45735553 45735581 -74548731 + (CTAA)n Simple_repeat Simple_repeat 3 30 0 4 933 256 244 25 25 chr13 45737388 45737468 -74546844 + RMER15 LTR ERVL 434 513 -62 4 933 309 26 0 0 chr13 45737647 45737685 -74546627 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 4 933 805 272 56 32 chr13 45738962 45739247 -74545065 + MER2B DNA MER2_type 6 297 -39 4 933 848 147 7 0 chr13 45739681 45739831 -74544481 + CT-rich Low_complexity Low_complexity 2 152 0 4 933 180 224 82 0 chr13 45740426 45740475 -74543837 + MIR SINE MIR 131 183 -79 4 933 249 219 109 0 chr13 45740972 45741036 -74543276 - ID4_ SINE ID -11 72 2 4 933 793 297 9 9 chr13 45741517 45741731 -74542581 + B3 SINE B2 3 216 0 4 933 239 259 0 96 chr13 45742159 45742253 -74542059 + ORR1D2 LTR MaLR 46 130 -244 4 933 26 50 0 0 chr13 45742253 45742293 -74542019 + AT_rich Low_complexity Low_complexity 1 40 0 4 933 840 265 53 71 chr13 45742293 45742510 -74541802 - Lx9 LINE L1 -13 7631 7418 4 933 3242 28 0 221 chr13 45742510 45743070 -74541242 + RLTR10C LTR ERVK 1 436 0 4 933 840 265 53 71 chr13 45743070 45743230 -74541082 - Lx9 LINE L1 -227 7417 7261 4 933 927 258 29 4 chr13 45743328 45743569 -74540743 + ORR1D2 LTR MaLR 122 368 -2 4 933 831 260 5 10 chr13 45743571 45743777 -74540535 - ID_B1 SINE B4 -18 206 2 4 933 397 312 24 59 chr13 45743846 45744016 -74540296 + RSINE1 SINE B4 2 165 0 4 933 483 63 0 0 chr13 45744017 45744080 -74540232 + (TAGA)n Simple_repeat Simple_repeat 1 63 0 4 934 204 281 0 0 chr13 45744527 45744584 -74539728 + CT-rich Low_complexity Low_complexity 2 58 0 4 934 183 114 0 0 chr13 45746082 45746117 -74538195 + (T)n Simple_repeat Simple_repeat 1 35 0 4 934 330 67 0 0 chr13 45746207 45746252 -74538060 + (A)n Simple_repeat Simple_repeat 1 45 0 5 934 274 197 33 0 chr13 45747772 45747833 -74536479 - ID SINE ID -150 74 12 5 934 383 222 0 75 chr13 45747847 45747954 -74536358 - PB1 SINE Alu -2 125 27 5 934 455 281 52 56 chr13 45748438 45748753 -74535559 - ORR1E LTR MaLR -15 355 43 5 934 1006 144 171 0 chr13 45749467 45749654 -74534658 + URR1B DNA MER1_type 3 221 -4 5 934 687 167 0 0 chr13 45749792 45750010 -74534302 + (TG)n Simple_repeat Simple_repeat 1 218 0 5 934 272 27 27 0 chr13 45750656 45750693 -74533619 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 934 1077 231 45 34 chr13 45750896 45751165 -74533147 + B4A SINE B4 1 272 -20 5 934 245 347 69 35 chr13 45751424 45751597 -74532715 - MER20 DNA MER1_type -7 212 34 5 934 310 21 21 21 chr13 45752137 45752185 -74532127 + (TTTTTG)n Simple_repeat Simple_repeat 1 48 0 5 934 403 233 238 27 chr13 45752185 45752370 -74531942 - B4 SINE B4 -68 224 1 5 934 255 270 12 75 chr13 45752917 45752997 -74531315 - ID4 SINE ID -3 80 6 5 934 411 202 58 108 chr13 45752991 45753156 -74531156 - ID_B1 SINE B4 -60 232 86 5 934 497 323 39 30 chr13 45753430 45753660 -74530652 - B4A SINE B4 -36 256 25 5 934 299 238 0 59 chr13 45753691 45753776 -74530536 - ID4_ SINE ID -3 80 1 5 934 361 250 46 105 chr13 45754158 45754310 -74530002 + MLT1A LTR MaLR 3 145 -229 5 934 261 0 0 0 chr13 45754320 45754349 -74529963 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 934 255 125 0 0 chr13 45754355 45754395 -74529917 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 5 934 592 48 0 23 chr13 45754395 45754481 -74529831 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 5 934 680 177 0 8 chr13 45754481 45754606 -74529706 - B1_Mur4 SINE Alu -7 143 20 5 934 628 104 8 31 chr13 45756130 45756259 -74528053 + (TATG)n Simple_repeat Simple_repeat 1 126 0 5 934 419 274 207 25 chr13 45756261 45756496 -74527816 - B4A SINE B4 -14 278 1 5 934 297 75 0 0 chr13 45758858 45758898 -74525414 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 934 1071 190 19 10 chr13 45759092 45759299 -74525013 - B3 SINE B2 -7 209 1 5 934 423 0 0 0 chr13 45759390 45759437 -74524875 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 934 552 255 35 14 chr13 45759452 45759595 -74524717 - RSINE1 SINE B4 -17 148 3 5 934 692 312 99 16 chr13 45759770 45760083 -74524229 - MER44A DNA MER2_type 0 339 1 5 934 449 273 96 6 chr13 45760409 45760575 -74523737 + B3A SINE B2 2 182 -16 5 934 483 18 0 0 chr13 45761592 45761648 -74522664 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 934 331 257 60 68 chr13 45761915 45762032 -74522280 - PB1D10 SINE Alu -1 116 1 5 934 278 243 37 46 chr13 45762717 45762825 -74521487 - MLT1A1 LTR MaLR -3 405 299 5 934 1291 252 80 0 chr13 45762908 45763257 -74521055 + MTEa LTR MaLR 3 379 0 5 934 291 302 0 0 chr13 45763262 45763348 -74520964 - MLT1A1 LTR MaLR -275 133 48 5 934 4479 57 0 7 chr13 45763454 45764015 -74520297 - L1Md_F2 LINE L1 -1 6581 6025 5 934 697 251 97 20 chr13 45764050 45764245 -74520067 - B3 SINE B2 0 216 7 5 934 431 277 45 15 chr13 45764993 45765011 -74519301 + B1F1 SINE Alu 3 138 -11 5 934 598 228 0 0 chr13 45765011 45765125 -74519187 + ID_B1 SINE B4 100 213 -11 5 934 257 286 67 48 chr13 45765634 45765843 -74518469 + L1MC5 LINE L1 7360 7572 -389 5 934 366 23 0 0 chr13 45765843 45765886 -74518426 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 934 413 312 24 77 chr13 45765990 45766160 -74518152 - B4 SINE B4 -131 161 1 5 934 558 280 0 40 chr13 45767078 45767227 -74517085 - ID_B1 SINE B4 0 224 82 5 934 336 280 172 7 chr13 45767373 45767524 -74516788 + ID_B1 SINE B4 1 176 -48 5 934 258 227 120 0 chr13 45767460 45767535 -74516777 + PB1D10 SINE Alu 25 108 -9 5 934 351 0 0 0 chr13 45767535 45767574 -74516738 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 934 441 0 0 0 chr13 45767574 45767622 -74516690 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 934 753 213 0 0 chr13 45768528 45768669 -74515643 + B1_Mur1 SINE Alu 6 146 -3 5 934 252 0 0 0 chr13 45768819 45768847 -74515465 + (CAGG)n Simple_repeat Simple_repeat 2 29 0 5 934 590 244 0 29 chr13 45769805 45769944 -74514368 - B1_Mur4 SINE Alu -13 137 3 5 934 618 269 7 0 chr13 45770448 45770593 -74513719 + B1F SINE Alu 3 148 -1 5 934 1380 23 17 0 chr13 45770623 45770799 -74513513 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 5 934 298 273 99 9 chr13 45771893 45772004 -74512308 + B1F SINE Alu 22 142 -7 5 934 281 292 10 13 chr13 45772051 45772153 -74512159 + ID4 SINE ID 10 109 -43 5 934 213 300 0 0 chr13 45772667 45772717 -74511595 + ID SINE ID 29 78 -146 5 934 530 261 23 64 chr13 45772878 45773050 -74511262 - RSINE1 SINE B4 0 165 1 5 934 320 281 88 73 chr13 45773098 45773179 -74511133 + B4A SINE B4 9 97 -195 5 934 1043 139 66 11 chr13 45773179 45773361 -74510951 + B2_Mm2 SINE B2 1 192 -3 5 934 320 281 88 73 chr13 45773361 45773426 -74510886 + B4A SINE B4 98 153 -139 5 934 275 0 29 0 chr13 45773426 45773461 -74510851 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 934 320 281 88 73 chr13 45773461 45773505 -74510807 + B4A SINE B4 154 202 -90 5 934 661 325 53 25 chr13 45773505 45773827 -74510485 + L1MC2 LINE L1 6005 6335 -9 5 934 560 261 21 42 chr13 45774334 45774478 -74509834 + ID_B1 SINE B4 84 224 0 5 934 1369 50 5 9 chr13 45774819 45775043 -74509269 + (TTTC)n Simple_repeat Simple_repeat 1 222 0 5 934 1177 62 0 7 chr13 45775048 45775195 -74509117 - B1_Mm SINE Alu 0 147 2 5 934 1137 113 0 0 chr13 45775247 45775424 -74508888 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 5 934 458 249 60 62 chr13 45775456 45775560 -74508752 + RSINE1 SINE B4 2 190 -34 5 934 492 244 25 0 chr13 45775560 45775679 -74508633 + B1F SINE Alu 12 133 -16 5 934 458 249 60 62 chr13 45775679 45775696 -74508616 + RSINE1 SINE B4 191 224 0 5 934 215 222 36 29 chr13 45775696 45775835 -74508477 + GA-rich Low_complexity Low_complexity 1 140 0 5 934 504 0 0 0 chr13 45776420 45776476 -74507836 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 934 1072 247 110 0 chr13 45778130 45778430 -74505882 + L1MB3 LINE L1 5685 6017 -166 5 934 600 282 94 0 chr13 45778495 45778644 -74505668 - RSINE1 SINE B4 -1 164 2 5 934 1329 80 3 0 chr13 45778673 45779066 -74505246 + (TGGA)n Simple_repeat Simple_repeat 1 394 0 5 934 227 254 60 0 chr13 45779082 45779149 -74505163 + L1MB3 LINE L1 6091 6161 -10 5 934 787 172 34 14 chr13 45779468 45779615 -74504697 - B2_Mm2 SINE B2 -3 192 43 5 934 598 237 7 61 chr13 45781911 45782059 -74502253 + B1F SINE Alu 1 140 -9 5 934 182 345 63 9 chr13 45782090 45782201 -74502111 + L2c LINE L2 2946 3062 -325 5 934 501 277 0 9 chr13 45782370 45782483 -74501829 + PB1D7 SINE Alu 3 114 -6 5 934 207 0 0 0 chr13 45783672 45783695 -74500617 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 934 530 67 13 0 chr13 45783816 45783891 -74500421 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 934 376 255 123 109 chr13 45784262 45784473 -74499839 - ID_B1 SINE B4 -8 216 3 5 934 594 202 0 0 chr13 45785039 45785148 -74499164 + B3A SINE B2 2 110 -88 5 934 268 111 18 18 chr13 45785162 45785217 -74499095 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 5 934 478 29 0 29 chr13 45785218 45785288 -74499024 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 934 375 23 0 0 chr13 45785683 45785727 -74498585 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 934 198 0 0 0 chr13 45786419 45786441 -74497871 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 934 1250 112 17 0 chr13 45786443 45786622 -74497690 - B2_Mm2 SINE B2 -13 182 1 5 934 540 330 19 39 chr13 45787115 45787320 -74496992 + ID_B1 SINE B4 21 221 -3 5 934 204 125 0 0 chr13 45787323 45787355 -74496957 + (CAA)n Simple_repeat Simple_repeat 2 33 0 5 934 351 0 0 0 chr13 45788501 45788540 -74495772 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 934 352 331 16 39 chr13 45789398 45789527 -74494785 + B4A SINE B4 66 191 -101 5 934 467 315 40 47 chr13 45789477 45789627 -74494685 + B3A SINE B2 49 197 -1 5 934 439 361 7 14 chr13 45789675 45789821 -74494491 - RSINE1 SINE B4 -4 161 17 5 934 1235 148 75 19 chr13 45789821 45790034 -74494278 - URR1B DNA MER1_type 0 225 1 5 934 387 0 0 0 chr13 45790262 45790305 -74494007 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 934 189 257 25 114 chr13 45790836 45790915 -74493397 + L2 LINE L2 1856 1927 -1492 5 934 750 237 0 6 chr13 45791558 45791715 -74492597 - B3A SINE B2 -42 156 1 5 934 469 30 30 0 chr13 45792300 45792367 -74491945 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 934 336 317 73 85 chr13 45792551 45792799 -74491513 + L1M2 LINE L1 3011 3255 -2888 5 934 300 53 0 0 chr13 45793022 45793060 -74491252 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 5 934 195 42 0 0 chr13 45793443 45793467 -74490845 + (TTAG)n Simple_repeat Simple_repeat 3 26 0 5 934 243 205 342 13 chr13 45793645 45793724 -74490588 + PB1D10 SINE Alu 13 117 0 5 934 246 303 26 0 chr13 45793773 45793849 -74490463 + ID4 SINE ID 4 81 -2 5 934 207 234 0 41 chr13 45794861 45794910 -74489402 + (ATG)n Simple_repeat Simple_repeat 2 48 0 5 934 503 171 9 0 chr13 45794910 45795015 -74489297 + GA-rich Low_complexity Low_complexity 1 106 0 5 934 231 304 51 159 chr13 45795812 45795840 -74488472 + B4 SINE B4 70 224 -66 5 934 560 204 34 62 chr13 45795840 45795986 -74488326 + B1F SINE Alu 7 148 -1 5 934 495 0 0 0 chr13 45796055 45796110 -74488202 + (TC)n Simple_repeat Simple_repeat 2 56 0 6 934 450 0 0 0 chr13 45796110 45796159 -74488153 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 934 288 0 0 0 chr13 45796237 45796269 -74488043 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 934 523 259 201 52 chr13 45797264 45797413 -74486899 - B4 SINE B4 -6 286 97 6 934 660 246 7 7 chr13 45797413 45797552 -74486760 - B1_Mur1 SINE Alu -9 140 2 6 934 523 259 201 52 chr13 45797552 45797651 -74486661 - B4 SINE B4 -196 96 2 6 934 357 274 103 9 chr13 45797985 45798092 -74486220 - MER5A DNA MER1_type -70 119 3 6 934 222 297 27 0 chr13 45798676 45798750 -74485562 + C-rich Low_complexity Low_complexity 5 80 0 6 934 519 335 16 40 chr13 45798817 45799066 -74485246 + MLT1E3 LTR MaLR 23 265 -359 6 934 402 319 106 18 chr13 45799072 45799347 -74484965 + MLT1E3 LTR MaLR 382 680 0 6 934 462 120 0 0 chr13 45799400 45799475 -74484837 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 934 471 259 26 35 chr13 45799475 45799582 -74484730 - PB1D10 SINE Alu -8 109 3 6 934 238 291 43 75 chr13 45799501 45799594 -74484718 - MT2B LTR ERVL -360 241 152 6 934 525 287 14 7 chr13 45799669 45799813 -74484499 - B1F1 SINE Alu 0 149 5 6 934 1994 168 34 45 chr13 45799876 45800256 -74484056 - ORR1C2 LTR MaLR 0 384 9 6 934 496 277 66 20 chr13 45800803 45800954 -74483358 - RSINE1 SINE B4 0 165 8 6 934 1743 125 84 13 chr13 45801450 45801749 -74482563 - Lx LINE L1 0 6654 6335 6 934 456 280 34 93 chr13 45801770 45801975 -74482337 - B3A SINE B2 -5 193 1 6 934 571 280 0 7 chr13 45802022 45802166 -74482146 + B1_Mur2 SINE Alu 1 143 -6 6 934 384 22 0 0 chr13 45802299 45802344 -74481968 + (TC)n Simple_repeat Simple_repeat 1 45 0 6 934 1397 70 11 11 chr13 45803362 45803551 -74480761 - B2_Mm2 SINE B2 0 195 7 6 934 432 319 77 16 chr13 45803593 45803787 -74480525 - ID_B1 SINE B4 -18 206 1 6 934 407 335 25 43 chr13 45804450 45804600 -74479712 + ID_B1 SINE B4 63 214 -10 6 934 518 0 16 0 chr13 45804600 45804662 -74479650 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 6 934 407 335 25 43 chr13 45804662 45804673 -74479639 + ID_B1 SINE B4 215 221 -3 6 934 234 0 0 0 chr13 45805146 45805172 -74479140 + (TC)n Simple_repeat Simple_repeat 1 26 0 6 934 558 43 0 0 chr13 45805263 45805332 -74478980 + (GA)n Simple_repeat Simple_repeat 2 70 0 6 934 302 291 0 25 chr13 45805902 45805983 -74478329 + MTE2b LTR MaLR 6 84 -295 6 934 1213 259 47 25 chr13 45805995 45806312 -74478000 + MTE2b LTR MaLR 56 379 0 6 934 293 276 2 148 chr13 45806326 45806547 -74477765 - L1MB5 LINE L1 -26 6154 5965 6 934 794 324 91 21 chr13 45806727 45807099 -74477213 + MT2A LTR ERVL 134 531 -2 6 934 459 0 0 0 chr13 45807133 45807184 -74477128 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 934 688 246 95 38 chr13 45807209 45807526 -74476786 - L1MB5 LINE L1 -282 5892 5558 6 934 740 282 33 5 chr13 45807566 45807780 -74476532 + ID_B1 SINE B4 5 224 0 6 934 345 47 0 0 chr13 45807791 45807834 -74476478 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 934 306 0 0 0 chr13 45807841 45807875 -74476437 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 934 261 294 0 80 chr13 45807907 45808007 -74476305 - MT2B LTR ERVL -2 599 508 6 934 600 191 0 0 chr13 45808007 45808096 -74476216 + polypurine Low_complexity Low_complexity 1 89 0 6 934 531 0 0 0 chr13 45808096 45808155 -74476157 + (GGGAA)n Simple_repeat Simple_repeat 1 59 0 6 934 600 191 0 0 chr13 45808155 45808191 -74476121 + polypurine Low_complexity Low_complexity 90 125 0 6 934 255 287 78 89 chr13 45808243 45808420 -74475892 - L1MB5 LINE L1 -683 5495 5318 6 934 300 83 0 0 chr13 45808420 45808468 -74475844 + (ATG)n Simple_repeat Simple_repeat 2 49 0 6 934 386 312 195 38 chr13 45808468 45808832 -74475480 - L1MB5 LINE L1 -861 5317 4898 6 934 204 217 0 21 chr13 45809187 45809234 -74475078 + C-rich Low_complexity Low_complexity 1 46 0 6 934 224 253 82 57 chr13 45809693 45809840 -74474472 - MIRb SINE MIR -17 251 88 6 934 276 324 93 19 chr13 45809975 45810082 -74474230 - Tigger5 DNA MER2_type -1 2405 2291 6 934 477 50 0 0 chr13 45810584 45810644 -74473668 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 934 180 0 0 0 chr13 45811840 45811860 -74472452 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 934 1295 255 14 14 chr13 45811883 45812169 -74472143 - B4A SINE B4 -4 288 3 6 934 1186 250 8 27 chr13 45813080 45813343 -74470969 + B4 SINE B4 17 274 -18 6 934 778 236 128 5 chr13 45813576 45813780 -74470532 - B4A SINE B4 -63 229 1 6 934 283 241 73 24 chr13 45813786 45813889 -74470423 - L1MB4 LINE L1 -48 6135 6028 6 934 327 323 15 66 chr13 45814479 45814615 -74469697 + RMER15 LTR ERVL 432 560 -15 6 934 1555 45 14 24 chr13 45815293 45815500 -74468812 - L1Md_F2 LINE L1 0 6582 6378 6 934 343 230 81 0 chr13 45815593 45815667 -74468645 + ID SINE ID 1 80 -144 6 934 606 266 28 0 chr13 45815738 45815881 -74468431 + ID_B1 SINE B4 72 218 -6 6 934 275 341 12 35 chr13 45816532 45816617 -74467695 - ID4_ SINE ID 0 83 1 6 934 330 26 0 0 chr13 45816660 45816699 -74467613 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 934 881 300 18 18 chr13 45816705 45816980 -74467332 - B4 SINE B4 -17 275 1 6 934 644 327 47 85 chr13 45818041 45818442 -74465870 + Kanga2_a DNA Tc2 3 388 -500 6 934 278 309 168 39 chr13 45818591 45818847 -74465465 + Kanga2_a DNA Tc2 435 723 -165 6 934 378 0 0 0 chr13 45818861 45818903 -74465409 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 934 600 255 138 0 chr13 45818905 45819050 -74465262 - B3A SINE B2 -33 165 1 6 934 637 167 17 42 chr13 45819074 45819193 -74465119 - B1_Mur3 SINE Alu 0 149 34 6 934 728 261 9 65 chr13 45819189 45819419 -74464893 - B4 SINE B4 -62 230 14 6 934 200 35 35 0 chr13 45821557 45821586 -74462726 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 934 760 289 79 32 chr13 45822475 45822754 -74461558 + B4A SINE B4 1 292 0 6 934 287 376 9 0 chr13 45822756 45822865 -74461447 + (CA)n Simple_repeat Simple_repeat 2 111 0 6 934 360 0 0 0 chr13 45823426 45823466 -74460846 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 6 934 557 285 14 14 chr13 45823494 45823640 -74460672 - MER21B LTR ERV1 -224 639 494 6 934 617 287 57 28 chr13 45823697 45823980 -74460332 - B4A SINE B4 0 292 2 6 934 2079 144 71 19 chr13 45824564 45824932 -74459380 - ORR1B1 LTR MaLR 0 394 8 6 934 275 311 11 22 chr13 45825346 45825438 -74458874 + MLT1I LTR MaLR 321 411 0 6 934 180 0 0 0 chr13 45826870 45826890 -74457422 + (TGGGGG)n Simple_repeat Simple_repeat 4 23 0 6 934 232 217 42 135 chr13 45827027 45827044 -74457268 + MT2B2 LTR ERVL 153 160 -424 6 934 376 274 24 12 chr13 45827044 45827129 -74457183 + PB1D10 SINE Alu 2 87 -30 6 934 1548 253 10 67 chr13 45827139 45827296 -74457016 + MTE2a LTR MaLR 16 170 -209 6 934 1418 116 4 62 chr13 45827296 45827536 -74456776 - URR1A DNA MER1_type 0 226 1 6 934 1548 253 10 67 chr13 45827536 45827764 -74456548 + MTE2a LTR MaLR 171 379 0 6 934 254 224 0 39 chr13 45827764 45827815 -74456497 + B1F SINE Alu 86 134 -15 6 934 24 0 0 0 chr13 45828422 45828446 -74455866 + AT_rich Low_complexity Low_complexity 1 24 0 6 934 519 112 0 0 chr13 45828903 45828983 -74455329 + (TG)n Simple_repeat Simple_repeat 1 80 0 6 934 1033 254 46 21 chr13 45829001 45829242 -74455070 + MTEa LTR MaLR 8 254 -125 6 934 370 348 54 16 chr13 45829533 45829717 -74454595 + RMER15 LTR ERVL 345 535 -40 6 934 204 320 116 8 chr13 45831696 45831825 -74452487 + MIR3 SINE MIR 3 145 -63 6 934 717 241 94 0 chr13 45832370 45832561 -74451751 - ID_B1 SINE B4 -13 211 3 6 934 249 57 0 0 chr13 45832776 45832811 -74451501 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 934 1235 89 0 6 chr13 45832811 45832991 -74451321 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 6 934 591 112 0 0 chr13 45832991 45833080 -74451232 + (GAAA)n Simple_repeat Simple_repeat 4 92 0 6 934 402 21 0 0 chr13 45833491 45833538 -74450774 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 934 977 215 25 96 chr13 45833961 45834285 -74450027 + MTEa LTR MaLR 65 365 -14 6 934 1253 79 11 0 chr13 45835522 45835700 -74448612 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 6 934 216 97 0 0 chr13 45835700 45835731 -74448581 + (TCC)n Simple_repeat Simple_repeat 3 33 0 6 934 261 57 0 0 chr13 45836343 45836378 -74447934 + (TC)n Simple_repeat Simple_repeat 1 35 0 6 934 360 228 61 9 chr13 45836742 45836857 -74447455 - ID_B1 SINE B4 -14 210 90 6 934 244 396 28 0 chr13 45837608 45837714 -74446598 - PB1D7 SINE Alu -11 109 1 6 934 447 236 133 8 chr13 45837741 45837869 -74446443 - B1_Mur1 SINE Alu -5 144 1 6 934 296 305 0 0 chr13 45837993 45838075 -74446237 + ID4 SINE ID 2 83 0 6 934 304 261 19 13 chr13 45838740 45838899 -74445413 + GA-rich Low_complexity Low_complexity 4 163 0 6 934 722 211 43 6 chr13 45839612 45839774 -74444538 + ID_B1 SINE B4 57 224 0 6 934 210 37 0 0 chr13 45839774 45839801 -74444511 + (A)n Simple_repeat Simple_repeat 1 27 0 6 934 208 135 0 0 chr13 45839834 45839871 -74444441 + (A)n Simple_repeat Simple_repeat 1 37 0 6 934 187 374 16 0 chr13 45840404 45840474 -74443838 - MIRm SINE MIR -120 156 83 6 934 207 279 44 0 chr13 45841215 45841283 -74443029 - MIR SINE MIR -55 153 83 6 934 995 232 39 71 chr13 45842058 45842341 -74441971 + B4 SINE B4 17 290 -2 6 934 506 215 0 7 chr13 45842352 45842488 -74441824 + (TA)n Simple_repeat Simple_repeat 1 135 0 6 934 501 224 0 27 chr13 45842447 45842631 -74441681 + (CATA)n Simple_repeat Simple_repeat 2 180 0 6 934 248 278 0 0 chr13 45842640 45842694 -74441618 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 934 732 224 19 13 chr13 45843365 45843523 -74440789 - B3 SINE B2 -57 159 1 6 934 294 95 0 0 chr13 45843551 45843593 -74440719 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 6 934 476 325 0 7 chr13 45843595 45843750 -74440562 - RSINE1 SINE B4 -9 156 3 6 934 244 212 35 147 chr13 45844022 45844138 -74440174 + PB1D7 SINE Alu 3 105 -15 7 934 755 306 109 12 chr13 45844138 45844459 -74439853 + ORR1E LTR MaLR 4 355 -4 7 934 593 205 102 8 chr13 45845654 45845782 -74438530 - B1F SINE Alu -7 142 3 7 934 198 103 0 0 chr13 45845978 45846007 -74438305 + (A)n Simple_repeat Simple_repeat 1 29 0 7 934 306 50 0 0 chr13 45847313 45847353 -74436959 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 7 934 215 31 31 0 chr13 45847514 45847546 -74436766 + (CAA)n Simple_repeat Simple_repeat 2 34 0 7 934 477 0 0 0 chr13 45847646 45847699 -74436613 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 934 513 0 0 0 chr13 45847699 45847755 -74436557 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 934 331 362 59 68 chr13 45848187 45848424 -74435888 - MLT1C LTR MaLR -8 459 225 7 934 829 251 39 5 chr13 45849066 45849270 -74435042 - ID_B1 SINE B4 -10 214 4 7 934 184 333 14 0 chr13 45849361 45849433 -74434879 - MIRc SINE MIR -118 150 78 7 934 448 299 0 0 chr13 45849498 45849595 -74434717 - PB1D10 SINE Alu -20 97 1 7 934 246 296 21 74 chr13 45849512 45849607 -74434705 - MT2B2 LTR ERVL -343 241 152 7 934 21 36 0 0 chr13 45849796 45849824 -74434488 + AT_rich Low_complexity Low_complexity 1 28 0 7 934 639 65 0 0 chr13 45850572 45850665 -74433647 + (TTTTG)n Simple_repeat Simple_repeat 1 93 0 7 934 617 272 58 14 chr13 45851194 45851444 -74432868 + RLTR20D LTR ERVK 1 287 -281 7 934 420 261 5 157 chr13 45851428 45851489 -74432823 + RLTR20D LTR ERVK 407 460 -108 7 934 360 0 0 0 chr13 45851489 45851529 -74432783 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 934 420 261 5 157 chr13 45851529 45851658 -74432654 + RLTR20D LTR ERVK 461 568 0 7 934 491 263 28 119 chr13 45851681 45851858 -74432454 - ID_B1 SINE B4 -62 162 2 7 934 709 355 14 21 chr13 45852013 45852292 -74432020 + B4A SINE B4 15 291 -1 7 934 604 248 6 54 chr13 45852844 45853010 -74431302 + RSINE1 SINE B4 8 165 0 7 934 276 217 0 0 chr13 45853012 45853104 -74431208 + (TA)n Simple_repeat Simple_repeat 1 92 0 7 934 25 0 0 0 chr13 45853119 45853144 -74431168 + AT_rich Low_complexity Low_complexity 1 25 0 7 934 1259 224 101 32 chr13 45854177 45854523 -74429789 + MTEa LTR MaLR 10 379 0 7 934 229 322 24 47 chr13 45854748 45854875 -74429437 - MIRc SINE MIR -126 142 19 7 934 446 275 97 14 chr13 45854888 45855032 -74429280 - MTEb LTR MaLR -49 330 175 7 934 369 0 0 0 chr13 45855164 45855205 -74429107 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 934 608 314 39 38 chr13 45857079 45857409 -74426903 + L1MB7 LINE L1 5783 6107 -77 7 934 21 0 0 0 chr13 45857487 45857508 -74426804 + AT_rich Low_complexity Low_complexity 1 21 0 7 934 406 325 52 32 chr13 45857861 45858109 -74426203 + L1MC LINE L1 5566 5818 -2064 7 934 756 186 0 0 chr13 45858240 45858572 -74425740 + (TG)n Simple_repeat Simple_repeat 1 332 0 7 934 573 228 130 7 chr13 45858583 45858729 -74425583 - RSINE1 SINE B4 0 165 2 7 934 198 0 0 0 chr13 45858842 45858864 -74425448 + (A)n Simple_repeat Simple_repeat 1 22 0 7 934 538 258 0 36 chr13 45859028 45859165 -74425147 - B1F SINE Alu -7 142 11 7 934 240 275 103 30 chr13 45859164 45859264 -74425048 - PB1D10 SINE Alu -22 127 26 7 934 309 191 28 28 chr13 45859282 45859390 -74424922 + Lx6 LINE L1 7344 7451 -9 7 934 662 331 43 10 chr13 45859759 45860064 -74424248 + Lx8 LINE L1 7010 7324 -149 7 934 587 210 71 14 chr13 45860279 45860419 -74423893 + B1F SINE Alu 1 148 -1 7 934 408 304 148 11 chr13 45860467 45860650 -74423662 - ID_B1 SINE B4 -12 212 5 7 934 1149 269 96 24 chr13 45861314 45861783 -74422529 + Lx9 LINE L1 7142 7644 0 7 934 2719 270 74 15 chr13 45862257 45863176 -74421136 + RCHARR1 DNA MER1_type 2 974 0 7 934 779 31 10 0 chr13 45863225 45863323 -74420989 + (GA)n Simple_repeat Simple_repeat 2 100 0 7 934 703 263 81 0 chr13 45864239 45864437 -74419875 - ID_B1 SINE B4 -3 221 8 7 934 608 286 25 30 chr13 45864484 45864686 -74419626 + B3 SINE B2 5 205 -11 7 934 596 230 126 40 chr13 45865689 45865844 -74418468 + B3 SINE B2 1 166 -50 7 934 339 65 0 0 chr13 45865844 45865890 -74418422 + (CATA)n Simple_repeat Simple_repeat 3 48 0 7 934 596 230 126 40 chr13 45865890 45865933 -74418379 + B3 SINE B2 167 216 0 7 934 662 288 8 38 chr13 45866039 45866277 -74418035 + L1MB8 LINE L1 5832 6062 -116 7 934 459 52 0 0 chr13 45867516 45867574 -74416738 + (TAA)n Simple_repeat Simple_repeat 3 60 0 7 934 840 239 76 0 chr13 45867581 45867778 -74416534 + B3 SINE B2 2 213 -3 7 934 1335 105 26 0 chr13 45867793 45867983 -74416329 + B2_Mm2 SINE B2 1 195 0 7 934 1023 129 0 0 chr13 45867988 45868166 -74416146 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 7 934 21 0 0 0 chr13 45868361 45868382 -74415930 + AT_rich Low_complexity Low_complexity 1 21 0 7 934 553 277 60 28 chr13 45868499 45868681 -74415631 - B4A SINE B4 -104 188 1 7 934 318 26 0 0 chr13 45869843 45869882 -74414430 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 934 282 327 9 0 chr13 45870248 45870355 -74413957 + MamRep1161 DNA TcMar 1 108 -849 7 934 230 278 9 0 chr13 45870842 45870950 -74413362 + GA-rich Low_complexity Low_complexity 1 109 0 7 934 315 0 0 0 chr13 45871099 45871134 -74413178 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 934 225 296 130 0 chr13 45871306 45871414 -74412898 + MLT1J1 LTR MaLR 3 124 -320 7 934 657 274 69 40 chr13 45871811 45872088 -74412224 - B4A SINE B4 -2 290 14 7 934 249 270 120 17 chr13 45872116 45872233 -74412079 - ID_B1 SINE B4 -8 216 88 7 934 641 162 29 11 chr13 45872535 45872710 -74411602 + (TG)n Simple_repeat Simple_repeat 1 178 0 7 934 408 200 25 0 chr13 45872727 45872847 -74411465 + (TG)n Simple_repeat Simple_repeat 2 124 0 7 934 250 211 155 0 chr13 45872928 45872999 -74411313 - B1_Mur1 SINE Alu -9 140 59 7 934 273 119 0 0 chr13 45874000 45874042 -74410270 + (T)n Simple_repeat Simple_repeat 1 42 0 7 934 777 240 50 28 chr13 45874259 45874439 -74409873 - B3A SINE B2 -14 184 1 7 935 267 184 35 0 chr13 45875475 45875562 -74408750 + (TA)n Simple_repeat Simple_repeat 1 90 0 7 935 930 244 29 0 chr13 45876123 45876328 -74407984 - B3 SINE B2 -5 211 1 7 935 238 299 53 96 chr13 45876700 45876987 -74407325 - L1MC4a LINE L1 -32 7850 7573 7 935 863 223 35 30 chr13 45876987 45877186 -74407126 - B3 SINE B2 -15 201 2 7 935 238 299 53 96 chr13 45877186 45877275 -74407037 - L1MC4a LINE L1 -310 7572 7490 7 935 843 281 5 25 chr13 45877302 45877506 -74406806 - ID_B1 SINE B4 -18 206 7 7 935 291 71 0 0 chr13 45877606 45877648 -74406664 + (CTTG)n Simple_repeat Simple_repeat 1 42 0 7 935 3501 20 10 0 chr13 45878315 45878707 -74405605 - MTA_Mm LTR MaLR 0 396 1 7 935 197 330 28 28 chr13 45880047 45880156 -74404156 - MIRc SINE MIR -25 243 135 7 935 211 232 157 14 chr13 45880277 45880347 -74403965 - ID4 SINE ID -2 81 2 7 935 284 250 62 111 chr13 45881114 45881258 -74403054 + B4 SINE B4 36 172 -120 7 935 1083 135 16 11 chr13 45881410 45881597 -74402715 - B2_Mm2 SINE B2 -4 191 4 7 935 255 61 0 0 chr13 45881766 45881799 -74402513 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 935 237 326 0 21 chr13 45882047 45882141 -74402171 + AmnSINE1 SINE SINE 405 496 -79 7 935 419 267 17 17 chr13 45883037 45883155 -74401157 - B1F SINE Alu 0 149 32 7 935 30 0 0 0 chr13 45883835 45883865 -74400447 + AT_rich Low_complexity Low_complexity 1 30 0 7 935 666 189 0 0 chr13 45884193 45884373 -74399939 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 935 405 0 0 0 chr13 45884810 45884855 -74399457 + (TC)n Simple_repeat Simple_repeat 2 46 0 7 935 297 0 0 0 chr13 45884856 45884889 -74399423 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 935 719 321 30 22 chr13 45884957 45885228 -74399084 + B4A SINE B4 2 274 -18 7 935 1203 97 0 0 chr13 45885283 45885783 -74398529 + (TG)n Simple_repeat Simple_repeat 1 500 0 7 935 919 312 110 22 chr13 45885880 45886335 -74397977 + MER44B DNA MER2_type 2 496 -54 7 935 1000 185 20 20 chr13 45887712 45887916 -74396396 - B3 SINE B2 -2 214 11 7 935 228 230 76 63 chr13 45887847 45887926 -74396386 - B4 SINE B4 -212 80 1 7 935 189 74 0 0 chr13 45888366 45888393 -74395919 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 7 935 472 363 81 18 chr13 45888573 45888845 -74395467 - B4A SINE B4 -3 289 1 7 935 345 305 95 0 chr13 45888884 45888989 -74395323 - PB1D10 SINE Alu -1 116 2 7 935 360 0 0 0 chr13 45889902 45889942 -74394370 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 935 220 157 0 89 chr13 45890196 45890252 -74394060 + A-rich Low_complexity Low_complexity 1 51 0 7 935 661 297 48 22 chr13 45890271 45890540 -74393772 + B4A SINE B4 11 286 -6 7 935 260 308 13 0 chr13 45890550 45890628 -74393684 + (CATG)n Simple_repeat Simple_repeat 2 80 0 7 935 180 254 0 0 chr13 45890712 45890771 -74393541 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 935 197 274 11 0 chr13 45891110 45891205 -74393107 + (CA)n Simple_repeat Simple_repeat 1 96 0 7 935 24 0 0 0 chr13 45891205 45891229 -74393083 + AT_rich Low_complexity Low_complexity 1 24 0 7 935 606 261 25 31 chr13 45891380 45891542 -74392770 - B3 SINE B2 0 216 56 7 935 608 277 130 48 chr13 45892146 45892415 -74391897 + B4 SINE B4 2 292 0 7 935 406 268 148 44 chr13 45892684 45892887 -74391425 - ID_B1 SINE B4 0 224 1 7 935 1014 246 130 39 chr13 45893081 45893466 -74390846 + MER57C2 LTR ERV1 15 434 0 7 935 217 256 0 0 chr13 45893483 45893526 -74390786 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 8 935 223 398 28 0 chr13 45894028 45894136 -74390176 + B1F SINE Alu 11 121 -28 8 935 314 343 46 0 chr13 45894041 45894149 -74390163 + ID_B1 SINE B4 105 217 -7 8 935 195 42 0 0 chr13 45894241 45894265 -74390047 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 935 10578 20 0 5 chr13 45894732 45896624 -74387688 - L1Md_T LINE L1 0 6582 4700 8 935 349 326 50 14 chr13 45897004 45897144 -74387168 - RSINE1 SINE B4 -18 147 3 8 935 943 242 5 22 chr13 45897290 45897514 -74386798 + ID_B1 SINE B4 5 224 0 8 935 378 0 0 0 chr13 45898930 45898972 -74385340 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 935 296 247 237 41 chr13 45899156 45899325 -74384987 + ID_B1 SINE B4 23 224 0 8 935 421 310 187 17 chr13 45899974 45900204 -74384108 + B4 SINE B4 1 269 -23 8 935 452 32 16 0 chr13 45900204 45900266 -74384046 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 935 285 236 148 43 chr13 45900493 45900608 -74383704 + PB1 SINE Alu 1 127 0 8 935 692 272 101 58 chr13 45900730 45900988 -74383324 + B4 SINE B4 2 270 -22 8 935 243 88 0 0 chr13 45900988 45901022 -74383290 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 935 225 0 0 0 chr13 45901377 45901402 -74382910 + (A)n Simple_repeat Simple_repeat 1 25 0 8 935 216 0 0 0 chr13 45902348 45902372 -74381940 + (A)n Simple_repeat Simple_repeat 1 24 0 8 935 207 0 0 0 chr13 45902387 45902410 -74381902 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 935 567 261 14 21 chr13 45903797 45903942 -74380370 + B1F SINE Alu 1 144 -5 8 935 291 331 64 7 chr13 45904163 45904303 -74380009 + RSINE1 SINE B4 1 148 -17 8 935 422 297 31 0 chr13 45905171 45905299 -74379013 - ID_B1 SINE B4 -11 213 82 8 935 234 200 0 0 chr13 45907387 45907432 -74376880 + L1M7 LINE L1 1213 1257 -4961 8 935 288 0 0 0 chr13 45907757 45907789 -74376523 + (A)n Simple_repeat Simple_repeat 1 32 0 8 935 716 281 112 29 chr13 45908117 45908429 -74375883 - Lx8 LINE L1 -21 7452 7115 8 935 1102 231 21 8 chr13 45908422 45908662 -74375650 + Lx8 LINE L1 6892 7134 -339 8 935 342 0 0 0 chr13 45908771 45908809 -74375503 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 935 222 37 0 0 chr13 45909558 45909585 -74374727 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 935 513 157 13 7 chr13 45909585 45909739 -74374573 + GA-rich Low_complexity Low_complexity 2 156 0 8 935 578 294 14 0 chr13 45910080 45910226 -74374086 + RSINE1 SINE B4 3 150 -15 8 935 241 289 145 0 chr13 45910402 45910485 -74373827 + B1F1 SINE Alu 4 98 -51 8 935 484 335 42 0 chr13 45910581 45910694 -74373618 + B4 SINE B4 103 216 -76 8 935 315 0 0 0 chr13 45910694 45910729 -74373583 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 8 935 484 335 42 0 chr13 45910729 45910782 -74373530 + B4 SINE B4 217 275 -17 8 935 1141 64 0 0 chr13 45911725 45911865 -74372447 + B1_Mus2 SINE Alu 1 140 -7 8 935 198 0 0 0 chr13 45911865 45911887 -74372425 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 8 935 233 313 50 35 chr13 45912014 45912112 -74372200 - B4A SINE B4 -5 287 188 8 935 577 240 68 7 chr13 45912112 45912259 -74372053 - RSINE1 SINE B4 -7 158 3 8 935 213 338 202 58 chr13 45912259 45912402 -74371910 - B4 SINE B4 -105 187 11 8 935 665 269 17 0 chr13 45912650 45912825 -74371487 + B3A SINE B2 6 183 -15 8 935 246 32 0 0 chr13 45913061 45913092 -74371220 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 935 408 20 0 0 chr13 45913092 45913140 -74371172 + (GA)n Simple_repeat Simple_repeat 2 50 0 8 935 464 93 13 0 chr13 45913564 45913639 -74370673 + (TA)n Simple_repeat Simple_repeat 2 77 0 8 935 501 17 0 0 chr13 45913889 45913947 -74370365 + (TG)n Simple_repeat Simple_repeat 2 59 0 8 935 869 266 0 0 chr13 45913993 45914192 -74370120 - B4 SINE B4 -92 200 2 8 935 522 31 0 0 chr13 45914402 45914466 -74369846 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 8 935 287 269 0 0 chr13 45914743 45914821 -74369491 + B1F SINE Alu 49 126 -23 8 935 198 0 0 0 chr13 45914835 45914857 -74369455 + (A)n Simple_repeat Simple_repeat 1 22 0 8 935 773 246 57 10 chr13 45914857 45915050 -74369262 + B3 SINE B2 2 203 -13 8 935 660 209 6 11 chr13 45915075 45915254 -74369058 + (TA)n Simple_repeat Simple_repeat 1 178 0 8 935 279 0 0 0 chr13 45915363 45915394 -74368918 + (TA)n Simple_repeat Simple_repeat 1 31 0 8 935 404 37 19 0 chr13 45915394 45915448 -74368864 + (GA)n Simple_repeat Simple_repeat 1 55 0 8 935 776 195 128 0 chr13 45915652 45915847 -74368465 + URR1A DNA MER1_type 6 225 -1 8 935 2006 86 0 13 chr13 45917075 45917381 -74366931 - ORR1A2 LTR MaLR -25 302 1 8 935 414 243 34 60 chr13 45917523 45917672 -74366640 - HAL1-2a_MD LINE L1 -533 2491 2347 8 935 270 0 0 0 chr13 45918374 45918404 -74365908 + (TA)n Simple_repeat Simple_repeat 2 31 0 8 935 186 103 0 0 chr13 45918428 45918457 -74365855 + (CATATA)n Simple_repeat Simple_repeat 4 32 0 8 935 256 337 79 0 chr13 45918472 45918573 -74365739 - RSINE1 SINE B4 -46 119 11 8 935 239 227 284 0 chr13 45918885 45918973 -74365339 - PB1D10 SINE Alu -1 116 4 8 935 2454 212 35 4 chr13 45919078 45919571 -74364741 + RLTR18B LTR ERVK 1 508 -4 8 935 328 328 8 24 chr13 45920020 45920145 -74364167 + B4A SINE B4 1 123 -169 8 935 356 293 0 10 chr13 45920185 45920285 -74364027 + B4A SINE B4 191 289 -3 8 935 256 165 32 21 chr13 45920295 45920388 -74363924 + (CA)n Simple_repeat Simple_repeat 1 94 0 8 935 324 0 0 0 chr13 45920436 45920472 -74363840 + (TA)n Simple_repeat Simple_repeat 2 37 0 8 935 191 146 0 24 chr13 45920516 45920558 -74363754 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 935 3576 72 6 8 chr13 45920558 45921031 -74363281 + MT2C_Mm LTR ERVL 1 472 -3 8 935 369 0 0 0 chr13 45921031 45921072 -74363240 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 935 222 116 0 0 chr13 45921075 45921118 -74363194 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 8 935 186 43 0 0 chr13 45921219 45921242 -74363070 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 8 935 325 267 176 0 chr13 45921387 45921518 -74362794 - RSINE1 SINE B4 -8 157 4 8 935 1461 255 20 3 chr13 45921649 45922003 -74362309 - MTE2a LTR MaLR 0 379 20 8 935 208 283 0 62 chr13 45923210 45923274 -74361038 - MIRm SINE MIR -6 270 211 8 935 303 150 0 0 chr13 45923394 45923454 -74360858 + (A)n Simple_repeat Simple_repeat 1 60 0 8 935 258 324 34 51 chr13 45923932 45924049 -74360263 - MER2 DNA MER2_type -3 342 228 8 935 619 228 68 63 chr13 45924053 45924259 -74360053 + B3 SINE B2 2 208 -8 8 935 742 290 62 3 chr13 45924345 45924636 -74359676 + MLT1B LTR MaLR 83 390 0 8 935 232 219 195 0 chr13 45925345 45925427 -74358885 - MusHAL1 LINE L1 -660 2052 1955 8 935 774 77 34 56 chr13 45925554 45925732 -74358580 + CT-rich Low_complexity Low_complexity 3 176 0 8 935 256 0 0 0 chr13 45926424 45926457 -74357855 + L1_Mus2 LINE L1 6529 6561 -5 8 935 2643 221 44 11 chr13 45926579 45927197 -74357115 + Lx9 LINE L1 7000 7637 -7 8 935 363 44 0 0 chr13 45927273 45927318 -74356994 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 8 935 816 170 0 0 chr13 45927320 45927687 -74356625 + (TG)n Simple_repeat Simple_repeat 1 367 0 8 935 331 58 19 19 chr13 45927692 45927745 -74356567 - HAL1-3A_ME LINE L1 -844 2014 1962 8 935 355 298 75 12 chr13 45928735 45928895 -74355417 - MIRb SINE MIR -86 182 13 8 935 482 83 14 0 chr13 45929049 45929121 -74355191 + (CTA)n Simple_repeat Simple_repeat 3 75 0 8 935 660 26 0 0 chr13 45929334 45929412 -74354900 + (TC)n Simple_repeat Simple_repeat 1 78 0 8 935 724 236 16 27 chr13 45929747 45929934 -74354378 + B3 SINE B2 4 188 -28 8 935 419 277 9 9 chr13 45930012 45930125 -74354187 + B1F1 SINE Alu 1 113 -36 8 935 216 0 0 0 chr13 45930871 45930895 -74353417 + (TC)n Simple_repeat Simple_repeat 1 24 0 8 935 283 210 133 0 chr13 45930972 45931058 -74353254 + MIRm SINE MIR 73 158 -118 8 935 483 256 16 8 chr13 45931825 45931951 -74352361 - B4A SINE B4 -164 128 2 8 935 279 71 0 0 chr13 45932411 45932453 -74351859 + (TC)n Simple_repeat Simple_repeat 1 42 0 8 935 701 168 14 34 chr13 45934036 45934184 -74350128 + URR1A DNA MER1_type 81 225 -1 8 935 391 256 0 0 chr13 45934195 45934273 -74350039 - ID4 SINE ID -2 81 4 8 935 755 145 0 48 chr13 45934298 45934374 -74349938 + polypurine Low_complexity Low_complexity 2 77 0 8 935 1161 113 0 0 chr13 45934374 45934551 -74349761 + (GGA)n Simple_repeat Simple_repeat 3 179 0 8 935 755 164 8 53 chr13 45934551 45934765 -74349547 + polypurine Low_complexity Low_complexity 1 204 0 8 935 1177 69 0 0 chr13 45934765 45934910 -74349402 + B1_Mus1 SINE Alu 2 146 -2 8 935 474 18 0 0 chr13 45934910 45934965 -74349347 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 8 935 461 184 16 60 chr13 45934965 45935045 -74349267 + polypurine Low_complexity Low_complexity 100 178 0 8 935 457 310 27 7 chr13 45935940 45936086 -74348226 + B1F SINE Alu 1 149 0 8 935 390 231 59 146 chr13 45936137 45936211 -74348101 + L1MB4 LINE L1 5897 5973 -207 8 935 637 225 42 0 chr13 45936211 45936353 -74347959 + B1_Mur1 SINE Alu 1 148 -1 8 935 390 231 59 146 chr13 45936353 45936531 -74347781 + L1MB4 LINE L1 5974 6127 -53 8 935 878 40 61 9 chr13 45936545 45936882 -74347430 + (TG)n Simple_repeat Simple_repeat 1 354 0 8 935 232 329 0 47 chr13 45936882 45936968 -74347344 + MER2B DNA MER2_type 2 83 -253 8 935 500 170 111 62 chr13 45937005 45937149 -74347163 + ID_B1 SINE B4 70 220 -4 8 935 565 167 30 6 chr13 45937181 45937350 -74346962 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 9 935 1020 90 11 17 chr13 45937394 45937575 -74346737 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 9 935 2485 92 3 0 chr13 45938590 45938916 -74345396 + ORR1A2 LTR MaLR 1 327 0 9 935 1088 273 40 53 chr13 45939107 45939482 -74344830 + MTEa LTR MaLR 10 379 0 9 935 725 191 0 0 chr13 45940012 45940138 -74344174 + RSINE1 SINE B4 3 128 -37 9 935 706 141 5 48 chr13 45940167 45940353 -74343959 + (TATATG)n Simple_repeat Simple_repeat 1 178 0 9 935 358 247 194 47 chr13 45940775 45940945 -74343367 + B3A SINE B2 3 197 -1 9 935 601 278 24 33 chr13 45941612 45941824 -74342488 + ID_B1 SINE B4 4 213 -11 9 935 396 0 0 0 chr13 45942273 45942317 -74341995 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 935 489 214 3 58 chr13 45942760 45942880 -74341432 - B1F SINE Alu 0 117 10 9 935 431 276 43 43 chr13 45943117 45943257 -74341055 + B1_Mur1 SINE Alu 1 140 -9 9 935 806 308 136 75 chr13 45943974 45944322 -74339990 + MER21B LTR ERV1 3 421 -442 9 935 495 48 0 0 chr13 45944322 45944384 -74339928 + (TCCC)n Simple_repeat Simple_repeat 1 62 0 9 935 806 308 136 75 chr13 45944384 45944622 -74339690 + MER21B LTR ERV1 422 624 -239 9 935 188 267 41 49 chr13 45945668 45945790 -74338522 - MER5A DNA MER1_type -68 121 1 9 935 276 332 43 10 chr13 45947043 45947250 -74337062 + L1MA5 LINE L1 6048 6261 -39 9 935 920 142 0 11 chr13 45947998 45948038 -74336274 + polypurine Low_complexity Low_complexity 1 40 0 9 935 691 28 47 0 chr13 45948038 45948144 -74336168 + (GGA)n Simple_repeat Simple_repeat 2 112 0 9 935 920 147 0 8 chr13 45948144 45948325 -74335987 + polypurine Low_complexity Low_complexity 1 179 0 9 935 708 210 0 0 chr13 45948325 45948487 -74335825 + GA-rich Low_complexity Low_complexity 2 163 0 9 935 464 264 0 0 chr13 45948693 45948803 -74335509 + PB1D10 SINE Alu 2 111 -6 9 935 203 175 0 0 chr13 45949943 45949983 -74334329 + (CAA)n Simple_repeat Simple_repeat 2 41 0 9 935 634 241 115 5 chr13 45950381 45950581 -74333731 - ID_B1 SINE B4 -1 223 2 9 935 293 345 34 25 chr13 45951759 45951878 -74332434 - PB1D7 SINE Alu 0 120 1 9 935 422 250 46 79 chr13 45952328 45952480 -74331832 + B1F1 SINE Alu 1 147 -2 9 935 226 206 26 52 chr13 45952526 45952603 -74331709 + ID4_ SINE ID 3 77 -6 9 935 205 186 0 0 chr13 45953480 45953523 -74330789 + A-rich Low_complexity Low_complexity 1 43 0 9 935 333 310 60 0 chr13 45953567 45953667 -74330645 + PB1D10 SINE Alu 6 111 -6 9 935 579 283 60 5 chr13 45953678 45953863 -74330449 + B3A SINE B2 4 198 0 9 935 256 304 105 33 chr13 45954009 45954162 -74330150 - L2 LINE L2 -512 2907 2744 9 935 608 84 21 0 chr13 45954266 45954361 -74329951 - B1_Mus1 SINE Alu -51 97 1 9 935 253 276 0 0 chr13 45954409 45954467 -74329845 + ID4 SINE ID 2 59 -24 9 935 273 346 45 7 chr13 45954680 45954834 -74329478 + MLT1F2 LTR MaLR 1 160 -400 9 935 463 296 73 119 chr13 45955289 45955592 -74328720 + B4 SINE B4 2 290 -2 9 935 263 49 24 0 chr13 45955608 45955649 -74328663 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 935 234 0 0 0 chr13 45955668 45955694 -74328618 + (TC)n Simple_repeat Simple_repeat 1 26 0 9 935 297 0 0 0 chr13 45955694 45955726 -74328586 + (CA)n Simple_repeat Simple_repeat 1 33 0 9 935 973 306 26 48 chr13 45955838 45956216 -74328096 - MTE2a LTR MaLR -9 370 1 9 935 307 313 43 109 chr13 45956218 45956352 -74327960 - Tigger7 DNA MER2_type -115 224 70 9 935 210 37 0 0 chr13 45956352 45956379 -74327933 + (C)n Simple_repeat Simple_repeat 1 27 0 9 935 307 296 0 161 chr13 45956379 45956441 -74327871 - Tigger7 DNA MER2_type -2422 69 18 9 935 760 299 27 0 chr13 45956947 45957168 -74327144 + B4A SINE B4 1 227 -65 9 935 225 0 0 0 chr13 45957227 45957252 -74327060 + (CA)n Simple_repeat Simple_repeat 1 25 0 9 935 765 277 67 8 chr13 45957257 45957512 -74326800 + MER2 DNA MER2_type 70 339 -6 9 935 456 323 31 12 chr13 45958273 45958436 -74325876 + ID_B1 SINE B4 59 224 0 9 935 558 168 0 43 chr13 45958504 45958691 -74325621 + (CA)n Simple_repeat Simple_repeat 2 180 0 9 935 423 0 0 0 chr13 45958921 45958968 -74325344 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 935 799 250 133 16 chr13 45959031 45959287 -74325025 - B4A SINE B4 -6 286 1 9 935 349 364 6 0 chr13 45960011 45960173 -74324139 + GA-rich Low_complexity Low_complexity 1 163 0 9 935 300 34 0 92 chr13 45960678 45960743 -74323569 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 9 935 457 291 51 38 chr13 45961917 45962074 -74322238 + Tigger7 DNA MER2_type 9 167 -2324 9 935 434 211 146 0 chr13 45962076 45962199 -74322113 + Tigger7 DNA MER2_type 327 467 -2024 9 935 483 311 83 8 chr13 45962195 45962435 -74321877 + Tigger7 DNA MER2_type 2235 2491 0 9 935 403 240 127 8 chr13 45963893 45964019 -74320293 + RSINE1 SINE B4 3 143 -22 9 935 279 286 0 25 chr13 45964041 45964120 -74320192 + (CATA)n Simple_repeat Simple_repeat 2 78 0 9 935 192 210 109 31 chr13 45964328 45964392 -74319920 + MER5A DNA MER1_type 79 147 -42 9 935 850 185 152 10 chr13 45964452 45964649 -74319663 + URR1B DNA MER1_type 1 225 0 9 935 387 0 0 0 chr13 45964814 45964857 -74319455 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 935 539 331 103 44 chr13 45964924 45965401 -74318911 + MLT1D LTR MaLR 1 505 0 9 935 1179 269 49 47 chr13 45965541 45965927 -74318385 - MTD LTR MaLR 0 419 33 9 935 796 256 121 11 chr13 45965956 45966236 -74318076 - MTD-int LTR MaLR -6 1252 942 9 935 261 270 83 95 chr13 45966341 45966509 -74317803 - MER20 DNA MER1_type -1 218 53 9 935 207 0 0 0 chr13 45967008 45967031 -74317281 + (T)n Simple_repeat Simple_repeat 1 23 0 9 935 286 280 48 29 chr13 45968067 45968170 -74316142 + RSINE1 SINE B4 20 124 -41 9 935 180 0 0 0 chr13 45968170 45968190 -74316122 + (CA)n Simple_repeat Simple_repeat 2 21 0 9 935 24 0 0 0 chr13 45968217 45968241 -74316071 + AT_rich Low_complexity Low_complexity 1 24 0 9 935 21 0 0 0 chr13 45969173 45969194 -74315118 + AT_rich Low_complexity Low_complexity 1 21 0 9 935 696 265 21 68 chr13 45969253 45969488 -74314824 - ID_B1 SINE B4 0 224 1 9 935 482 222 10 0 chr13 45970061 45970160 -74314152 - RSINE1 SINE B4 -60 105 6 9 935 328 285 63 101 chr13 45971200 45971407 -74312905 + B4 SINE B4 93 291 -1 9 935 288 0 0 0 chr13 45971839 45971871 -74312441 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 935 600 187 56 28 chr13 45971878 45972021 -74312291 + B1F2 SINE Alu 1 147 -2 9 935 1097 283 53 18 chr13 45972037 45972436 -74311876 + Lx8 LINE L1 5477 5920 -1553 9 935 315 267 23 20 chr13 45972711 45973015 -74311297 + GA-rich Low_complexity Low_complexity 1 305 0 9 935 224 194 0 0 chr13 45973908 45973944 -74310368 + G-rich Low_complexity Low_complexity 2 37 0 9 935 2992 275 53 14 chr13 45973955 45974835 -74309477 + Lx8 LINE L1 6205 7119 -354 9 935 352 319 13 53 chr13 45976775 45976927 -74307385 + RSINE1 SINE B4 5 150 -15 9 935 414 57 0 0 chr13 45976940 45976993 -74307319 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 935 22 0 0 0 chr13 45976999 45977021 -74307291 + AT_rich Low_complexity Low_complexity 1 22 0 9 935 800 156 0 22 chr13 45977525 45977709 -74306603 + GA-rich Low_complexity Low_complexity 1 180 0 9 935 200 303 0 43 chr13 45977853 45977922 -74306390 + G-rich Low_complexity Low_complexity 1 66 0 9 935 209 180 39 20 chr13 45978760 45978811 -74305501 + GA-rich Low_complexity Low_complexity 4 55 0 9 935 396 0 0 0 chr13 45979982 45980026 -74304286 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 935 261 83 0 0 chr13 45980135 45980171 -74304141 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 935 423 0 0 0 chr13 45980586 45980633 -74303679 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 935 231 306 120 0 chr13 45981021 45981129 -74303183 - B1_Mur1 SINE Alu -28 121 1 9 935 261 0 0 0 chr13 45981156 45981185 -74303127 + (A)n Simple_repeat Simple_repeat 1 29 0 9 935 822 283 25 0 chr13 45982030 45982228 -74302084 - B3 SINE B2 -6 210 8 9 935 700 271 84 18 chr13 45982477 45982702 -74301610 - B4 SINE B4 -14 278 39 9 935 426 157 0 0 chr13 45983428 45983511 -74300801 + (TG)n Simple_repeat Simple_repeat 1 83 0 9 935 186 71 0 0 chr13 45983511 45983539 -74300773 + (TCTCTG)n Simple_repeat Simple_repeat 1 28 0 9 935 383 319 28 78 chr13 45983563 45983845 -74300467 - B4A SINE B4 -18 274 7 9 935 254 333 0 0 chr13 45984270 45984345 -74299967 + (CA)n Simple_repeat Simple_repeat 2 76 0 9 935 477 0 0 0 chr13 45984502 45984555 -74299757 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 935 209 232 10 31 chr13 45985533 45985631 -74298681 + (TATG)n Simple_repeat Simple_repeat 4 99 0 9 935 387 231 156 51 chr13 45985937 45986174 -74298138 - L1MA8 LINE L1 0 6291 6029 9 935 257 118 0 19 chr13 45986208 45986260 -74298052 + (TTTTTG)n Simple_repeat Simple_repeat 2 52 0 9 935 396 0 0 0 chr13 45987086 45987130 -74297182 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 935 679 313 7 30 chr13 45988116 45988386 -74295926 + B4 SINE B4 29 292 0 9 935 333 0 0 0 chr13 45988416 45988453 -74295859 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 935 183 114 0 0 chr13 45988459 45988494 -74295818 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 9 935 464 302 188 20 chr13 45988518 45988827 -74295485 + MLT1A0 LTR MaLR 3 363 -2 9 935 631 226 139 5 chr13 45988965 45989152 -74295160 + B3 SINE B2 5 216 0 9 935 209 214 89 0 chr13 45990042 45990098 -74294214 + MIRc SINE MIR 69 129 -139 9 935 388 256 128 0 chr13 45990372 45990505 -74293807 + Tigger14a DNA MER2_type 80 229 -95 9 935 1174 274 103 11 chr13 45990859 45991236 -74293076 + Lx8 LINE L1 6926 7337 -136 9 935 407 313 67 0 chr13 45991238 45991388 -74292924 + RSINE1 SINE B4 2 161 -4 9 935 324 327 68 89 chr13 45992116 45992351 -74291961 - B4 SINE B4 -20 272 43 1 935 205 233 100 0 chr13 45992534 45992594 -74291718 - L3 LINE CR1 -159 4330 4265 1 935 274 302 35 0 chr13 45993993 45994079 -74290233 + PB1D10 SINE Alu 27 115 -2 1 935 1121 253 110 26 chr13 45994696 45995159 -74289153 + RMER5 LTR ERV1 33 534 0 1 935 315 0 0 0 chr13 45995362 45995397 -74288915 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 935 264 329 0 0 chr13 45995597 45995667 -74288645 + ID4 SINE ID 1 70 -13 1 935 216 86 0 0 chr13 45995672 45995707 -74288605 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 935 23 0 0 0 chr13 45995773 45995796 -74288516 + AT_rich Low_complexity Low_complexity 1 23 0 1 935 617 244 59 6 chr13 45996950 45997119 -74287193 + RMER1C Other Other 1155 1332 -10 1 935 1009 247 97 40 chr13 45997358 45997708 -74286604 + Lx8 LINE L1 6869 7238 -235 1 935 302 330 56 65 chr13 45997717 45997758 -74286554 - B3 SINE B2 0 216 177 1 935 1140 83 0 0 chr13 45997758 45997903 -74286409 - B1_Mm SINE Alu -1 146 2 1 935 337 293 67 73 chr13 45997903 45998075 -74286237 - B3A SINE B2 -40 176 5 1 935 566 271 11 86 chr13 45998081 45998272 -74286040 + Lx8 LINE L1 7223 7403 -70 1 935 764 201 156 54 chr13 45998272 45998477 -74285835 - URR1A DNA MER1_type 0 226 1 1 935 566 271 11 86 chr13 45998477 45998552 -74285760 + Lx8 LINE L1 7404 7469 -4 1 935 400 255 0 31 chr13 45998618 45998715 -74285597 + PB1D10 SINE Alu 18 111 -6 1 935 204 125 0 0 chr13 45998715 45998747 -74285565 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 935 235 72 0 45 chr13 46000841 46000885 -74283427 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 1 935 22 35 0 0 chr13 46000906 46000935 -74283377 + AT_rich Low_complexity Low_complexity 1 29 0 2 935 459 0 0 0 chr13 46001343 46001394 -74282918 + (TAGA)n Simple_repeat Simple_repeat 1 51 0 3 935 292 306 54 23 chr13 46001514 46001735 -74282577 - RMER17D2 LTR ERVK -235 574 347 4 935 456 267 13 100 chr13 46004130 46004280 -74280032 + B1F2 SINE Alu 5 141 -8 5 935 357 62 0 0 chr13 46004468 46004516 -74279796 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 935 314 304 96 0 chr13 46004660 46004795 -74279517 - RMER15 LTR ERVL -23 552 405 7 935 423 0 0 0 chr13 46005526 46005573 -74278739 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 935 336 250 13 0 chr13 46005942 46006018 -74278294 + ID4 SINE ID 3 79 -4 9 935 229 182 23 0 chr13 46006055 46006099 -74278213 + L1MC LINE L1 3298 3342 -2804 1 935 311 292 0 0 chr13 46006139 46006211 -74278101 + RSINE1 SINE B4 3 74 -91 1 936 495 0 0 0 chr13 46007232 46007287 -74277025 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 936 432 0 0 0 chr13 46007287 46007334 -74276978 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 936 237 108 0 0 chr13 46007574 46007611 -74276701 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 936 207 333 42 0 chr13 46007708 46007780 -74276532 + MER5A DNA MER1_type 71 145 -44 1 936 330 238 0 0 chr13 46007783 46007856 -74276456 + Lx7 LINE L1 6777 6841 -855 1 936 279 0 0 0 chr13 46007860 46007891 -74276421 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 936 1313 22 15 127 chr13 46007948 46008153 -74276159 - B2_Mm1a SINE B2 0 193 12 1 936 219 374 10 0 chr13 46008345 46008444 -74275868 - MIRc SINE MIR -85 183 84 1 936 270 293 13 13 chr13 46008746 46008822 -74275490 + ID4_ SINE ID 2 77 -6 2 936 213 154 0 0 chr13 46008831 46008870 -74275442 + (CATA)n Simple_repeat Simple_repeat 4 42 0 2 936 336 247 117 0 chr13 46009189 46009266 -74275046 - B3A SINE B2 -112 86 1 2 936 322 292 157 21 chr13 46009666 46009806 -74274506 - MIRb SINE MIR -30 238 80 2 936 257 51 0 25 chr13 46009851 46009891 -74274421 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 936 522 202 39 39 chr13 46010131 46010260 -74274052 + B1F SINE Alu 13 141 -8 2 936 260 312 0 86 chr13 46010279 46010349 -74273963 + ID4 SINE ID 4 67 -85 2 936 278 234 31 0 chr13 46010795 46010859 -74273453 - PB1D10 SINE Alu -51 66 1 2 936 230 267 53 12 chr13 46010859 46010904 -74273408 - B4A SINE B4 -205 87 35 2 936 329 319 151 68 chr13 46011036 46011228 -74273084 + B4 SINE B4 67 274 -18 2 936 321 26 0 0 chr13 46011276 46011314 -74272998 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 936 464 317 82 41 chr13 46011631 46011802 -74272510 - MER58A DNA MER1_type -25 199 22 3 936 261 0 0 0 chr13 46012052 46012081 -74272231 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 3 936 611 230 206 6 chr13 46012081 46012256 -74272056 - ID_B1 SINE B4 -13 211 2 3 936 225 0 0 0 chr13 46012412 46012437 -74271875 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 3 936 213 39 0 0 chr13 46013097 46013123 -74271189 + (A)n Simple_repeat Simple_repeat 1 26 0 3 936 224 100 25 0 chr13 46013788 46013828 -74270484 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 936 392 245 144 31 chr13 46014848 46015008 -74269304 - MTEb LTR MaLR 0 379 202 3 936 850 50 25 0 chr13 46015009 46015128 -74269184 + (GGGAGA)n Simple_repeat Simple_repeat 1 122 0 3 936 610 223 159 24 chr13 46015128 46015251 -74269061 - MTEb LTR MaLR -171 208 72 3 936 243 103 0 0 chr13 46015251 46015290 -74269022 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 936 636 14 0 0 chr13 46015290 46015362 -74268950 + (GA)n Simple_repeat Simple_repeat 2 74 0 4 936 610 223 159 24 chr13 46015362 46015407 -74268905 - MTEb LTR MaLR -308 71 17 3 936 480 283 28 21 chr13 46016696 46016837 -74267475 + B4A SINE B4 130 271 -21 4 936 1029 113 0 0 chr13 46016840 46017008 -74267304 + (CA)n Simple_repeat Simple_repeat 2 169 0 4 936 255 31 0 0 chr13 46017022 46017054 -74267258 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 936 468 0 0 0 chr13 46017173 46017225 -74267087 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 936 25 0 0 0 chr13 46017702 46017727 -74266585 + AT_rich Low_complexity Low_complexity 1 25 0 4 936 216 0 0 0 chr13 46017921 46017945 -74266367 + (A)n Simple_repeat Simple_repeat 1 24 0 4 936 333 0 0 0 chr13 46018295 46018332 -74265980 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 936 411 56 0 0 chr13 46018332 46018386 -74265926 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 936 385 155 39 0 chr13 46018385 46018514 -74265798 + (TG)n Simple_repeat Simple_repeat 2 135 0 4 936 655 137 25 6 chr13 46018565 46018727 -74265585 + (TG)n Simple_repeat Simple_repeat 2 166 0 4 936 365 171 17 17 chr13 46018743 46018862 -74265450 + (TG)n Simple_repeat Simple_repeat 1 119 0 4 936 754 250 48 124 chr13 46018870 46019101 -74265211 - B4A SINE B4 0 292 92 5 936 345 75 0 0 chr13 46019101 46019154 -74265158 + (GTTTG)n Simple_repeat Simple_repeat 2 54 0 5 936 754 250 48 124 chr13 46019154 46019237 -74265075 - B4A SINE B4 -201 91 3 5 936 1422 228 118 11 chr13 46020620 46020646 -74263666 - MTD LTR MaLR -6 413 387 5 936 199 0 65 0 chr13 46020646 46020677 -74263635 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 936 1422 228 118 11 chr13 46020677 46021023 -74263289 - MTD LTR MaLR -33 386 2 5 936 848 310 55 22 chr13 46021266 46021540 -74262772 - B4A SINE B4 -2 290 8 5 936 606 260 11 6 chr13 46022168 46022214 -74262098 - B3A SINE B2 -23 175 130 5 936 579 29 0 0 chr13 46022214 46022283 -74262029 + (GA)n Simple_repeat Simple_repeat 1 69 0 5 936 606 260 11 6 chr13 46022283 46022410 -74261902 - B3A SINE B2 -69 129 2 5 936 307 127 16 16 chr13 46022803 46022867 -74261445 + (TCCA)n Simple_repeat Simple_repeat 4 67 0 5 936 836 264 35 5 chr13 46023318 46023520 -74260792 + B3 SINE B2 1 208 -8 5 936 268 287 20 41 chr13 46024076 46024174 -74260138 + ID_B1 SINE B4 79 174 -50 5 936 401 220 38 48 chr13 46024091 46024196 -74260116 + PB1D10 SINE Alu 11 114 -3 6 936 393 247 24 0 chr13 46024244 46024329 -74259983 + ID_B1 SINE B4 129 215 -9 6 936 243 204 61 0 chr13 46024287 46024336 -74259976 + PB1D10 SINE Alu 64 115 -2 6 936 551 194 96 7 chr13 46024764 46024899 -74259413 - Lx5 LINE L1 0 7050 6904 6 936 272 137 0 19 chr13 46025475 46025527 -74258785 + G-rich Low_complexity Low_complexity 4 54 0 6 936 194 316 53 0 chr13 46025565 46025622 -74258690 + L2b LINE L2 3304 3363 -12 6 936 204 106 64 0 chr13 46025659 46025706 -74258606 + A-rich Low_complexity Low_complexity 3 52 0 6 936 689 248 106 12 chr13 46025835 46026032 -74258280 - B3A SINE B2 -9 207 1 6 936 941 93 49 21 chr13 46026073 46026216 -74258096 + B1_Mus1 SINE Alu 2 148 0 6 936 221 75 0 24 chr13 46026216 46026257 -74258055 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 6 936 1525 58 16 0 chr13 46026268 46026458 -74257854 + B2_Mm2 SINE B2 3 195 0 7 936 988 167 76 30 chr13 46027330 46027528 -74256784 + B3 SINE B2 4 210 -6 7 936 231 61 0 0 chr13 46027534 46027567 -74256745 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 7 936 210 128 0 0 chr13 46027634 46027673 -74256639 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 7 936 628 173 7 86 chr13 46028506 46028645 -74255667 + B1_Mur1 SINE Alu 22 149 0 7 936 553 288 22 0 chr13 46028900 46029039 -74255273 + RSINE1 SINE B4 2 143 -22 7 936 299 130 0 18 chr13 46029055 46029110 -74255202 + (TCTCCC)n Simple_repeat Simple_repeat 2 55 0 7 936 24 53 0 0 chr13 46029127 46029165 -74255147 + AT_rich Low_complexity Low_complexity 1 38 0 7 936 387 0 0 0 chr13 46029366 46029409 -74254903 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 936 316 232 58 0 chr13 46030063 46030132 -74254180 - ID4_ SINE ID -8 75 3 7 936 301 279 171 8 chr13 46030387 46030510 -74253802 + MIR SINE MIR 56 198 -64 8 936 311 314 146 0 chr13 46030554 46030691 -74253621 + L1M5 LINE L1 3019 3175 -2971 8 936 229 130 43 0 chr13 46031063 46031109 -74253203 + B1F1 SINE Alu 9 56 -93 8 936 925 280 73 54 chr13 46031237 46031627 -74252685 + ORR1E LTR MaLR 1 370 0 8 936 319 109 22 0 chr13 46031909 46031964 -74252348 - MTE2a LTR MaLR -39 340 267 8 936 210 225 0 0 chr13 46032187 46032227 -74252085 + BC1_Mm scRNA scRNA 3 42 -110 8 936 659 251 108 39 chr13 46032838 46032924 -74251388 + B4 SINE B4 2 82 -210 8 936 315 0 0 0 chr13 46032924 46032959 -74251353 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 8 936 1074 144 0 0 chr13 46032959 46033138 -74251174 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 8 936 659 264 106 41 chr13 46033138 46033283 -74251029 + B4 SINE B4 82 245 -47 8 936 432 246 2 10 chr13 46033284 46033393 -74250919 + B1F SINE Alu 3 112 -8 8 936 183 184 0 0 chr13 46033412 46033450 -74250862 + (CACG)n Simple_repeat Simple_repeat 1 38 0 9 936 532 258 24 65 chr13 46034212 46034382 -74249930 - RSINE1 SINE B4 0 165 3 9 936 452 221 137 0 chr13 46034413 46034508 -74249804 - PB1D7 SINE Alu -11 109 2 9 936 352 177 194 20 chr13 46034549 46034647 -74249665 + PB1D7 SINE Alu 3 117 -3 9 936 21 0 0 0 chr13 46036064 46036085 -74248227 + AT_rich Low_complexity Low_complexity 1 21 0 9 936 1167 28 14 14 chr13 46037208 46037353 -74246959 + B1_Mus2 SINE Alu 2 146 -1 9 936 207 162 0 0 chr13 46037766 46037803 -74246509 + (ATG)n Simple_repeat Simple_repeat 3 39 0 9 936 270 81 0 0 chr13 46038066 46038103 -74246209 + (T)n Simple_repeat Simple_repeat 1 37 0 9 936 354 329 223 8 chr13 46038448 46038708 -74245604 - Lx8 LINE L1 -9 7464 7149 9 936 341 292 35 26 chr13 46038800 46038916 -74245396 - PB1D10 SINE Alu 0 117 1 9 936 372 258 18 82 chr13 46039022 46039034 -74245278 - ID_B1 SINE B4 -41 183 82 1 936 513 206 31 0 chr13 46039034 46039131 -74245181 - PB1D7 SINE Alu -20 100 1 1 936 252 0 0 0 chr13 46039219 46039247 -74245065 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 936 544 248 0 16 chr13 46040472 46040595 -74243717 + B1F1 SINE Alu 2 122 -27 1 936 256 321 0 74 chr13 46041043 46041164 -74243148 + PB1D7 SINE Alu 4 115 -5 1 936 266 216 20 0 chr13 46041912 46041963 -74242349 + polypurine Low_complexity Low_complexity 1 52 0 1 936 285 75 0 0 chr13 46042019 46042059 -74242253 + (CCCTAA)n Simple_repeat Simple_repeat 1 40 0 1 936 510 215 54 70 chr13 46042166 46042351 -74241961 + B3A SINE B2 1 182 -16 1 936 21 0 0 0 chr13 46042366 46042387 -74241925 + AT_rich Low_complexity Low_complexity 1 21 0 1 936 706 198 11 0 chr13 46043018 46043195 -74241117 + GA-rich Low_complexity Low_complexity 2 180 0 1 936 971 157 0 6 chr13 46043231 46043411 -74240901 + GA-rich Low_complexity Low_complexity 2 180 0 1 936 617 235 0 0 chr13 46043457 46043572 -74240740 + RSINE1 SINE B4 16 130 -35 1 936 582 15 0 0 chr13 46043573 46043640 -74240672 + (CCA)n Simple_repeat Simple_repeat 2 68 0 1 936 1326 202 243 18 chr13 46044029 46044371 -74239941 + MTD LTR MaLR 1 419 0 1 936 334 307 10 0 chr13 46044379 46044480 -74239832 - MIRb SINE MIR -80 188 87 1 936 705 250 88 62 chr13 46045184 46045274 -74239038 + B4A SINE B4 3 85 -207 1 936 258 32 0 0 chr13 46045274 46045305 -74239007 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 936 705 250 88 62 chr13 46045305 46045487 -74238825 + B4A SINE B4 86 281 -11 1 936 213 270 16 46 chr13 46046957 46047079 -74237233 + MIR SINE MIR 22 139 -137 1 936 422 325 95 0 chr13 46047346 46047472 -74236840 - ID_B1 SINE B4 -5 219 82 1 936 195 42 0 0 chr13 46047566 46047590 -74236722 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 936 338 188 40 0 chr13 46047590 46047691 -74236621 + (TA)n Simple_repeat Simple_repeat 2 106 0 1 936 1004 169 6 6 chr13 46049598 46049776 -74234536 - URR1B DNA MER1_type 0 225 48 1 936 381 244 0 0 chr13 46049936 46050014 -74234298 - ID4 SINE ID -1 82 5 1 936 249 98 0 0 chr13 46050122 46050163 -74234149 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 1 936 212 231 266 39 chr13 46050379 46050548 -74233764 - MIR SINE MIR -21 247 38 1 936 316 248 79 79 chr13 46050657 46050797 -74233515 - B1F SINE Alu -5 144 5 1 936 441 0 0 0 chr13 46051635 46051684 -74232628 + (CA)n Simple_repeat Simple_repeat 1 49 0 1 936 531 0 0 0 chr13 46051996 46052055 -74232257 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 936 840 184 156 5 chr13 46052506 46052692 -74231620 - ID_B1 SINE B4 -8 216 3 1 936 225 175 0 0 chr13 46052779 46052819 -74231493 + (TGAA)n Simple_repeat Simple_repeat 4 43 0 1 936 222 37 0 0 chr13 46053482 46053509 -74230803 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 936 204 146 20 40 chr13 46054855 46054905 -74229407 + A-rich Low_complexity Low_complexity 6 54 0 1 936 738 50 0 0 chr13 46055341 46055440 -74228872 + (TCTCTG)n Simple_repeat Simple_repeat 4 102 0 1 936 22 0 0 0 chr13 46057856 46057878 -74226434 + AT_rich Low_complexity Low_complexity 1 22 0 1 936 212 167 0 0 chr13 46058877 46058913 -74225399 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 936 201 196 0 0 chr13 46059018 46059064 -74225248 + (CGG)n Simple_repeat Simple_repeat 2 47 0 1 936 213 222 19 0 chr13 46059123 46059177 -74225135 + CT-rich Low_complexity Low_complexity 2 56 0 1 936 28 0 0 0 chr13 46059770 46059798 -74224514 + GC_rich Low_complexity Low_complexity 1 28 0 1 936 312 176 0 0 chr13 46059905 46059973 -74224339 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 936 238 152 0 33 chr13 46060370 46060431 -74223881 + C-rich Low_complexity Low_complexity 4 62 0 1 936 35 0 0 0 chr13 46061838 46061873 -74222439 + AT_rich Low_complexity Low_complexity 1 35 0 1 936 426 20 0 0 chr13 46061884 46061935 -74222377 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 936 28 48 0 0 chr13 46062397 46062439 -74221873 + AT_rich Low_complexity Low_complexity 1 42 0 1 936 333 0 0 0 chr13 46062791 46062828 -74221484 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 936 240 35 0 0 chr13 46062828 46062856 -74221456 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 936 46 74 0 0 chr13 46063221 46063316 -74220996 + AT_rich Low_complexity Low_complexity 1 95 0 1 936 378 0 0 0 chr13 46063326 46063368 -74220944 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 936 423 0 0 0 chr13 46063368 46063414 -74220898 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 936 261 306 86 56 chr13 46063414 46063611 -74220701 - B4A SINE B4 -41 251 49 1 936 335 183 14 0 chr13 46064048 46064119 -74220193 + HAL1-3A_ME LINE L1 1947 2018 -840 1 936 384 77 0 0 chr13 46064124 46064176 -74220136 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 936 303 257 114 0 chr13 46064191 46064296 -74220016 + MER2 DNA MER2_type 89 205 -140 1 936 368 253 176 31 chr13 46064858 46065017 -74219295 + ID_B1 SINE B4 34 215 -9 1 936 708 74 0 0 chr13 46065055 46065150 -74219162 + (CA)n Simple_repeat Simple_repeat 1 95 0 1 936 352 331 33 0 chr13 46065165 46065286 -74219026 + RSINE1 SINE B4 3 127 -38 1 936 279 0 0 0 chr13 46065381 46065412 -74218900 + (TAAAAA)n Simple_repeat Simple_repeat 3 33 0 1 936 378 0 0 0 chr13 46065452 46065494 -74218818 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 936 286 258 42 21 chr13 46065597 46065692 -74218620 - B1F SINE Alu -52 97 1 1 936 305 321 38 15 chr13 46065731 46065750 -74218562 + B1F SINE Alu 3 138 -11 1 936 358 284 18 44 chr13 46065750 46065864 -74218448 + ID_B1 SINE B4 103 213 -11 1 936 22 0 0 0 chr13 46066876 46066898 -74217414 + AT_rich Low_complexity Low_complexity 1 22 0 1 936 277 276 0 13 chr13 46066911 46066988 -74217324 + ID4 SINE ID 8 83 0 1 936 287 315 8 51 chr13 46067107 46067224 -74217088 + MER33 DNA MER1_type 9 120 -204 1 936 216 204 23 0 chr13 46067227 46067271 -74217041 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1 936 228 268 0 0 chr13 46067366 46067448 -74216864 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 936 736 261 57 6 chr13 46068062 46068239 -74216073 + B4A SINE B4 33 218 -74 1 936 288 0 0 0 chr13 46068402 46068434 -74215878 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 936 216 67 0 0 chr13 46068527 46068557 -74215755 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 1 936 233 274 0 76 chr13 46068581 46068660 -74215652 + B4A SINE B4 220 292 0 1 936 216 0 0 0 chr13 46069487 46069511 -74214801 + (A)n Simple_repeat Simple_repeat 1 24 0 1 936 962 123 6 22 chr13 46070751 46070934 -74213378 + CT-rich Low_complexity Low_complexity 1 180 0 1 936 1135 102 11 0 chr13 46070948 46071125 -74213187 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 936 882 95 0 0 chr13 46071480 46071606 -74212706 + (GAA)n Simple_repeat Simple_repeat 3 128 0 1 936 712 324 67 23 chr13 46071735 46072165 -74212147 + MLT1C LTR MaLR 1 449 -18 1 936 229 276 86 0 chr13 46072728 46072786 -74211526 - ID4_ SINE ID -17 66 4 1 936 1159 56 0 7 chr13 46073039 46073182 -74211130 - B1_Mus1 SINE Alu -2 146 5 1 936 236 319 245 16 chr13 46073188 46073555 -74210757 + L2 LINE L2 2591 3041 -378 1 936 180 0 0 0 chr13 46073638 46073658 -74210654 + (T)n Simple_repeat Simple_repeat 1 20 0 1 936 812 122 0 15 chr13 46074201 46074334 -74209978 + B1_Mur4 SINE Alu 20 150 0 1 936 378 0 0 0 chr13 46074341 46074383 -74209929 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 936 498 311 61 19 chr13 46074404 46074617 -74209695 + ID_B1 SINE B4 3 224 0 1 936 394 266 36 18 chr13 46074727 46074838 -74209474 - PB1D7 SINE Alu 0 120 8 1 936 284 150 37 12 chr13 46075361 46075442 -74208870 + GA-rich Low_complexity Low_complexity 3 85 0 1 936 195 265 14 42 chr13 46078004 46078075 -74206237 - L4 LINE RTE -214 1815 1747 1 936 2693 158 69 4 chr13 46078218 46078712 -74205600 + RLTR11A2 LTR ERVK 2 527 0 1 936 514 282 149 23 chr13 46078889 46079150 -74205162 - RMER15 LTR ERVL -16 559 266 1 936 262 301 51 36 chr13 46079371 46079509 -74204803 + L1ME3A LINE L1 6034 6173 0 1 936 433 252 0 44 chr13 46079967 46080131 -74204181 + B4A SINE B4 1 151 -73 1 936 21 36 0 0 chr13 46080321 46080349 -74203963 + AT_rich Low_complexity Low_complexity 1 28 0 1 936 27 0 0 0 chr13 46080497 46080524 -74203788 + AT_rich Low_complexity Low_complexity 1 27 0 1 936 1511 49 22 0 chr13 46080617 46080800 -74203512 - B2_Mm2 SINE B2 -7 188 2 1 936 1350 240 74 11 chr13 46081458 46081808 -74202504 + MTEa LTR MaLR 1 372 -7 1 936 381 290 0 0 chr13 46082984 46083084 -74201228 - ORR1E LTR MaLR -259 100 1 1 936 591 322 57 32 chr13 46083808 46084087 -74200225 - B4A SINE B4 -4 288 3 1 936 663 278 106 64 chr13 46084472 46084802 -74199510 + MER2 DNA MER2_type 1 344 -1 1 936 265 202 0 43 chr13 46084969 46085062 -74199250 + (TATG)n Simple_repeat Simple_repeat 2 90 0 1 936 1009 117 0 14 chr13 46085194 46085342 -74198970 - B1_Mus1 SINE Alu -2 146 1 1 936 244 59 0 0 chr13 46085674 46085708 -74198604 - ORR1B1 LTR MaLR 0 394 361 1 936 803 164 9 160 chr13 46085715 46085940 -74198372 - ORR1B1 LTR MaLR -163 231 41 1 936 730 264 57 6 chr13 46086642 46086817 -74197495 + B4A SINE B4 95 278 -14 1 936 405 248 26 35 chr13 46087086 46087199 -74197113 + B1F SINE Alu 37 148 -1 1 936 242 330 10 10 chr13 46087489 46087593 -74196719 - PB1D10 SINE Alu -12 105 2 1 936 393 183 0 14 chr13 46087671 46087743 -74196569 + tRNA-Ala-GCY_ tRNA tRNA 5 75 0 1 936 261 314 41 48 chr13 46087942 46088089 -74196223 + LTR78 LTR ERV1 580 725 -579 2 936 296 309 169 32 chr13 46088395 46088549 -74195763 + LTR78 LTR ERV1 1130 1304 0 2 936 688 289 194 7 chr13 46088999 46089292 -74195020 - MTE2b LTR MaLR -14 365 18 2 936 234 317 96 21 chr13 46089576 46089763 -74194549 - L2c LINE L2 -81 3306 3106 2 936 839 263 93 71 chr13 46090232 46090580 -74193732 + MTE2a LTR MaLR 18 376 -43 2 936 287 315 118 0 chr13 46090644 46090771 -74193541 + MLT1B LTR MaLR 232 373 -17 2 936 1165 234 39 106 chr13 46090895 46091301 -74193011 - MTE2a LTR MaLR 0 379 1 2 936 585 228 252 16 chr13 46091503 46091753 -74192559 + L1MDa LINE L1 1939 2247 -4386 2 936 1700 244 25 10 chr13 46091760 46092165 -74192147 - MTD LTR MaLR -8 411 1 2 936 428 244 171 9 chr13 46092191 46092553 -74191759 + L1MDa LINE L1 2283 2707 -3830 2 936 751 285 67 42 chr13 46092625 46093221 -74191091 - MTE2b-int LTR MaLR -898 682 2 2 936 1407 244 74 6 chr13 46093223 46093561 -74190751 - MTE2b LTR MaLR -1 378 18 2 936 251 269 200 7 chr13 46093575 46093710 -74190602 + L1MD1 LINE L1 5998 6158 -84 2 936 753 246 231 23 chr13 46094516 46094824 -74189488 - MTEa LTR MaLR 0 379 8 2 936 505 288 13 20 chr13 46094915 46095064 -74189248 + RSINE1 SINE B4 1 148 -17 2 936 768 155 27 0 chr13 46095161 46095309 -74189003 + URR1A DNA MER1_type 72 223 -3 2 936 212 297 0 15 chr13 46096008 46096073 -74188239 + CT-rich Low_complexity Low_complexity 2 65 0 2 936 270 0 0 0 chr13 46096248 46096278 -74188034 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 936 22 0 0 0 chr13 46096278 46096300 -74188012 + AT_rich Low_complexity Low_complexity 1 22 0 2 936 850 288 60 31 chr13 46096528 46096816 -74187496 - Lx7 LINE L1 -1843 5853 5564 2 936 585 279 131 20 chr13 46098342 46098587 -74185725 - B4A SINE B4 -19 273 2 2 936 387 0 0 0 chr13 46098733 46098776 -74185536 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 936 531 0 0 0 chr13 46098776 46098834 -74185478 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 936 237 297 82 33 chr13 46099305 46099427 -74184885 + MLT1A1 LTR MaLR 1 128 -280 2 936 502 282 48 107 chr13 46099474 46099764 -74184548 + ORR1E LTR MaLR 87 359 0 2 936 664 300 84 23 chr13 46100162 46100425 -74183887 - B4A SINE B4 -13 279 1 2 936 315 244 25 13 chr13 46101072 46101151 -74183161 - ID4_ SINE ID -2 81 2 2 936 195 129 0 0 chr13 46102776 46102807 -74181505 + (CTA)n Simple_repeat Simple_repeat 1 31 0 2 936 275 266 34 34 chr13 46103145 46103262 -74181050 - MIRb SINE MIR -68 200 84 2 936 1038 263 21 7 chr13 46103326 46103613 -74180699 + B4A SINE B4 2 292 0 2 936 213 214 44 22 chr13 46103616 46103707 -74180605 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 2 936 223 191 21 0 chr13 46103710 46103757 -74180555 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 936 673 199 22 7 chr13 46103764 46103901 -74180411 + B1F2 SINE Alu 1 139 -10 2 936 463 292 48 22 chr13 46105225 46105456 -74178856 - MIR SINE MIR -11 251 15 2 936 417 249 127 248 chr13 46105769 46106100 -74178212 + B4 SINE B4 2 292 0 2 936 270 174 45 9 chr13 46107447 46107557 -74176755 + (TA)n Simple_repeat Simple_repeat 1 114 0 2 936 303 244 101 16 chr13 46107557 46107637 -74176675 - L1MCa LINE L1 -4545 2206 2120 2 936 3052 76 26 17 chr13 46107637 46108054 -74176258 - BGLII LTR ERVK 0 421 1 2 936 303 244 101 16 chr13 46108054 46108102 -74176210 - L1MCa LINE L1 -4632 2119 2068 2 936 380 218 6 16 chr13 46108560 46108742 -74175570 + (TA)n Simple_repeat Simple_repeat 1 180 0 2 936 252 239 34 0 chr13 46108755 46108843 -74175469 + (TA)n Simple_repeat Simple_repeat 1 91 0 2 936 976 288 77 63 chr13 46108883 46109313 -74174999 + Lx7 LINE L1 6979 7414 -282 2 936 330 229 48 57 chr13 46109302 46109453 -74174859 + Lx7 LINE L1 7535 7684 -12 2 936 351 68 0 0 chr13 46109576 46109635 -74174677 + L1_Mus4 LINE L1 6578 6636 0 2 936 347 255 105 64 chr13 46109752 46109924 -74174388 - L1MCa LINE L1 -5347 1404 1226 2 936 230 265 169 19 chr13 46109909 46110063 -74174249 - L1MCa LINE L1 -4942 1103 927 2 936 245 191 143 0 chr13 46110121 46110184 -74174128 + Lx8 LINE L1 6987 7058 -415 2 936 222 191 63 0 chr13 46110387 46110450 -74173862 + A-rich Low_complexity Low_complexity 2 68 0 2 936 414 57 0 0 chr13 46110522 46110575 -74173737 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 936 1175 259 30 0 chr13 46111680 46111946 -74172366 + MTEb LTR MaLR 11 284 -95 2 936 438 53 0 0 chr13 46111947 46112004 -74172308 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 936 1918 159 119 75 chr13 46112463 46112890 -74171422 + RLTR41 LTR ERV1 1 446 0 2 936 462 18 0 0 chr13 46112978 46113033 -74171279 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 936 1375 236 51 27 chr13 46113033 46113399 -74170913 + MTE2b LTR MaLR 5 374 0 2 936 189 0 0 0 chr13 46113636 46113657 -74170655 + (T)n Simple_repeat Simple_repeat 1 21 0 2 936 533 303 111 20 chr13 46113881 46114073 -74170239 + MER2 DNA MER2_type 3 213 -132 2 936 252 0 0 0 chr13 46114073 46114101 -74170211 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 936 564 315 64 23 chr13 46114126 46114392 -74169920 - B4A SINE B4 -12 280 4 2 936 508 272 37 0 chr13 46114501 46114637 -74169675 + RSINE1 SINE B4 19 159 -6 2 936 667 254 0 34 chr13 46117079 46117226 -74167086 - B1F2 SINE Alu -7 142 1 2 936 222 301 132 0 chr13 46117318 46117401 -74166911 - PB1D10 SINE Alu -15 102 9 2 936 207 298 156 8 chr13 46118276 46118398 -74165914 - MIRb SINE MIR 0 268 129 2 936 207 0 0 0 chr13 46119185 46119208 -74165104 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 936 625 264 112 12 chr13 46119315 46119476 -74164836 + MER58A DNA MER1_type 47 223 -1 2 936 523 325 47 0 chr13 46120867 46121079 -74163233 + ID_B1 SINE B4 2 223 -1 2 936 207 386 35 9 chr13 46121144 46121259 -74163053 - MIR SINE MIR -7 255 138 2 936 230 212 197 0 chr13 46121270 46121336 -74162976 - ID4_ SINE ID -4 79 1 2 936 422 65 16 0 chr13 46121474 46121536 -74162776 + (GGGAGA)n Simple_repeat Simple_repeat 5 67 0 2 936 238 93 36 18 chr13 46122060 46122115 -74162197 + (TTTTTG)n Simple_repeat Simple_repeat 4 59 0 2 936 266 167 18 18 chr13 46122126 46122181 -74162131 - B4 SINE B4 -69 223 169 2 936 314 252 162 51 chr13 46122192 46122309 -74162003 - ID_B1 SINE B4 -94 130 1 2 936 525 261 78 30 chr13 46123278 46123444 -74160868 + B3A SINE B2 8 181 -17 2 936 501 257 44 7 chr13 46123588 46123725 -74160587 - B1F SINE Alu -7 142 1 2 936 186 43 0 0 chr13 46123916 46123939 -74160373 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 936 515 297 208 44 chr13 46124057 46124307 -74160005 + B4A SINE B4 2 292 0 2 936 429 70 0 0 chr13 46124313 46124370 -74159942 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 936 967 284 40 22 chr13 46125172 46125449 -74158863 + ORR1E LTR MaLR 67 348 -11 2 936 711 317 15 10 chr13 46125659 46125860 -74158452 + B3 SINE B2 8 209 -7 2 936 269 275 170 21 chr13 46126085 46126226 -74158086 - MER5A DNA MER1_type -25 164 3 2 936 579 42 0 0 chr13 46127129 46127200 -74157112 + B1_Mm SINE Alu 71 141 -6 2 936 258 32 0 0 chr13 46127203 46127234 -74157078 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 936 550 301 91 44 chr13 46127337 46127611 -74156701 + B4A SINE B4 2 288 -4 2 936 405 0 0 0 chr13 46127856 46127901 -74156411 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 936 236 111 22 0 chr13 46128197 46128242 -74156070 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 936 398 217 226 0 chr13 46128275 46128381 -74155931 + B1F1 SINE Alu 1 130 -19 2 936 504 0 0 0 chr13 46128446 46128502 -74155810 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 2 936 302 338 76 72 chr13 46128861 46129123 -74155189 + ORR1E LTR MaLR 96 358 -1 2 936 408 20 0 0 chr13 46129841 46129890 -74154422 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 936 255 203 0 0 chr13 46129890 46129954 -74154358 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 936 471 241 0 0 chr13 46129974 46130136 -74154176 + (TG)n Simple_repeat Simple_repeat 2 163 0 2 936 457 296 0 36 chr13 46130169 46130281 -74154031 - B4A SINE B4 -1 291 184 2 936 244 270 48 13 chr13 46130482 46130574 -74153738 - ORR1D2 LTR MaLR -15 364 272 2 936 1167 151 96 19 chr13 46130844 46131053 -74153259 + URR1A DNA MER1_type 1 225 -1 2 936 315 333 42 12 chr13 46131242 46131409 -74152903 - Charlie5 DNA MER1_type -31 2593 2422 2 936 532 277 0 68 chr13 46131460 46131607 -74152705 - RSINE1 SINE B4 -26 139 3 2 936 27 0 0 0 chr13 46131719 46131746 -74152566 + AT_rich Low_complexity Low_complexity 1 27 0 2 936 192 103 138 0 chr13 46131760 46131847 -74152465 + (TATAA)n Simple_repeat Simple_repeat 5 103 0 2 936 246 62 0 0 chr13 46131881 46131913 -74152399 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 936 214 345 76 17 chr13 46132042 46132160 -74152152 - MER5B DNA MER1_type -49 129 5 2 936 450 0 0 0 chr13 46132396 46132446 -74151866 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 936 216 0 0 0 chr13 46132446 46132469 -74151843 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 936 659 247 71 44 chr13 46132470 46132571 -74151741 - Lx8 LINE L1 -145 7328 7227 2 936 507 125 0 0 chr13 46132571 46132675 -74151637 + (CTCA)n Simple_repeat Simple_repeat 2 105 0 2 936 659 247 71 44 chr13 46132675 46132755 -74151557 - Lx8 LINE L1 -247 7226 7143 2 936 23 33 0 0 chr13 46132755 46132785 -74151527 + GC_rich Low_complexity Low_complexity 1 30 0 2 936 2632 59 3 3 chr13 46133097 46133420 -74150892 + ORR1A2 LTR MaLR 5 327 0 2 936 270 125 0 0 chr13 46133553 46133601 -74150711 + (A)n Simple_repeat Simple_repeat 1 48 0 2 936 584 223 35 28 chr13 46133621 46133764 -74150548 + RSINE1 SINE B4 3 146 -19 2 936 485 258 8 62 chr13 46135088 46135216 -74149096 + B4 SINE B4 1 121 -171 2 936 222 138 34 17 chr13 46135869 46135928 -74148384 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 936 247 85 21 21 chr13 46135980 46136028 -74148284 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 937 219 167 30 15 chr13 46137870 46137937 -74146375 + CT-rich Low_complexity Low_complexity 1 68 0 3 937 237 211 0 0 chr13 46138371 46138423 -74145889 + A-rich Low_complexity Low_complexity 1 52 0 3 937 326 217 84 0 chr13 46139728 46139811 -74144501 - PB1D10 SINE Alu -2 115 26 3 937 764 281 52 14 chr13 46140359 46140572 -74143740 + MER2 DNA MER2_type 3 223 -122 3 937 330 303 0 0 chr13 46140572 46140648 -74143664 + ID4 SINE ID 2 77 -6 3 937 908 142 0 4 chr13 46140648 46141110 -74143202 + (CA)n Simple_repeat Simple_repeat 1 460 0 3 937 2282 121 54 19 chr13 46141129 46141445 -74142867 + ORR1C2 LTR MaLR 1 329 -55 3 937 2630 42 6 29 chr13 46141445 46141786 -74142526 + L1Md_F3 LINE L1 6238 6570 -14 3 937 2282 121 54 19 chr13 46141786 46141840 -74142472 + ORR1C2 LTR MaLR 330 383 -1 3 937 302 342 0 93 chr13 46141842 46141971 -74142341 + MER2 DNA MER2_type 224 340 -5 3 937 301 340 34 20 chr13 46142051 46142255 -74142057 - L1M5 LINE L1 -286 5838 5632 3 937 795 318 134 7 chr13 46142646 46143066 -74141246 + Tigger7 DNA MER2_type 38 516 -189 3 937 482 283 48 26 chr13 46143436 46143625 -74140687 + MER44D DNA MER2_type 505 697 -8 3 937 441 0 0 0 chr13 46144030 46144079 -74140233 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 937 1672 234 112 13 chr13 46144301 46144765 -74139547 + RLTR12B LTR ERVK 1 510 -18 3 937 8429 65 3 7 chr13 46144822 46146007 -74138305 + L1_Mus3 LINE L1 5467 6638 0 3 937 819 176 28 7 chr13 46146593 46146736 -74137576 - B1_Mur4 SINE Alu 0 150 5 3 937 183 318 52 67 chr13 46146860 46146995 -74137317 - MIR SINE MIR -60 148 16 3 937 368 274 19 9 chr13 46147589 46147696 -74136616 + B3A SINE B2 1 108 -90 3 937 267 31 0 0 chr13 46148111 46148143 -74136169 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3 937 506 284 69 27 chr13 46149431 46149619 -74134693 + B4A SINE B4 3 198 -94 3 937 302 215 28 9 chr13 46149637 46149745 -74134567 + (TTA)n Simple_repeat Simple_repeat 3 112 0 3 937 300 231 145 57 chr13 46151074 46151198 -74133114 + RMER5 LTR ERV1 15 149 -385 3 937 837 300 105 10 chr13 46151214 46151520 -74132792 + RMER5 LTR ERV1 198 532 -2 3 937 1635 258 80 17 chr13 46151898 46152363 -74131949 + Lx8 LINE L1 6842 7335 -138 3 937 1161 75 0 14 chr13 46152401 46152539 -74131773 + B1_Mus1 SINE Alu 1 138 -10 3 937 207 0 0 0 chr13 46152539 46152562 -74131750 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 3 937 650 167 102 8 chr13 46152585 46152712 -74131600 + B1_Mur3 SINE Alu 2 140 -9 3 937 387 0 0 0 chr13 46152712 46152755 -74131557 + (CTAA)n Simple_repeat Simple_repeat 3 45 0 3 937 331 234 13 13 chr13 46154835 46154913 -74129399 + ID4_ SINE ID 1 78 -5 3 937 270 0 0 0 chr13 46154913 46154943 -74129369 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 3 937 294 73 0 0 chr13 46155080 46155121 -74129191 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 3 937 318 282 136 0 chr13 46156283 46156393 -74127919 - PB1 SINE Alu -2 125 1 3 937 490 235 0 77 chr13 46156492 46156635 -74127677 + ORR1D2 LTR MaLR 1 132 -238 3 937 666 266 85 5 chr13 46157427 46157627 -74126685 + B3 SINE B2 1 216 0 3 937 23 0 0 0 chr13 46158259 46158282 -74126030 + AT_rich Low_complexity Low_complexity 1 23 0 3 937 299 0 0 0 chr13 46159077 46159109 -74125203 + L1_Mm LINE L1 5555 5586 -297 3 937 9217 2 0 0 chr13 46159109 46160105 -74124207 + L1Md_A LINE L1 5587 6582 0 3 937 676 325 19 5 chr13 46160703 46160916 -74123396 + B3 SINE B2 1 216 0 3 937 755 261 28 19 chr13 46161185 46161396 -74122916 + B3 SINE B2 4 216 0 3 937 444 301 109 0 chr13 46161427 46161583 -74122729 + B4 SINE B4 3 175 -117 3 937 704 92 18 0 chr13 46161717 46161826 -74122486 + (TAGA)n Simple_repeat Simple_repeat 2 112 0 3 937 1107 205 29 0 chr13 46162444 46162649 -74121663 - B3 SINE B2 -5 211 1 3 937 21 0 0 0 chr13 46162654 46162675 -74121637 + AT_rich Low_complexity Low_complexity 1 21 0 3 937 763 279 37 0 chr13 46163218 46163433 -74120879 - ID_B1 SINE B4 -1 223 1 3 937 370 0 40 0 chr13 46164304 46164354 -74119958 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 937 760 78 0 86 chr13 46164749 46164946 -74119366 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 937 218 348 8 51 chr13 46165780 46165898 -74118414 - PB1D9 SINE Alu -7 113 1 3 937 699 282 6 12 chr13 46165898 46165961 -74118351 - B4 SINE B4 -209 83 22 3 937 794 244 29 10 chr13 46166758 46166965 -74117347 + B3 SINE B2 1 211 -5 3 937 475 285 8 0 chr13 46167530 46167653 -74116659 - MER2 DNA MER2_type 0 345 222 3 937 189 0 0 0 chr13 46167653 46167674 -74116638 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 937 594 136 0 0 chr13 46167674 46167806 -74116506 + (GA)n Simple_repeat Simple_repeat 2 133 0 3 937 1155 283 74 12 chr13 46168129 46168465 -74115847 + MTE2b LTR MaLR 1 357 -22 3 937 1700 152 16 101 chr13 46168476 46168863 -74115449 + ORR1B1 LTR MaLR 41 394 0 3 937 317 299 94 38 chr13 46168931 46169091 -74115221 + ORR1E LTR MaLR 20 188 -171 3 937 241 310 50 0 chr13 46169129 46169229 -74115083 + MLT1L LTR MaLR 505 609 -1 3 937 255 332 151 16 chr13 46169268 46169519 -74114793 - ORR1E LTR MaLR 0 359 75 3 937 229 324 65 0 chr13 46170209 46170317 -74113995 + RMER15 LTR ERVL 458 572 -3 3 937 333 284 63 0 chr13 46170352 46170447 -74113865 - B1F SINE Alu -8 141 41 3 937 826 291 50 28 chr13 46170893 46171211 -74113101 + MER2 DNA MER2_type 21 345 0 3 937 188 265 0 10 chr13 46171473 46171572 -74112740 + CT-rich Low_complexity Low_complexity 2 99 0 3 937 891 244 46 36 chr13 46172442 46172591 -74111721 + Lx8 LINE L1 7188 7341 -132 3 937 234 0 0 0 chr13 46172591 46172617 -74111695 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 937 891 244 46 36 chr13 46172617 46172748 -74111564 + Lx8 LINE L1 7342 7471 -2 3 937 898 140 217 0 chr13 46172867 46173024 -74111288 - B2_Mm2 SINE B2 -4 191 1 3 937 189 74 0 0 chr13 46173198 46173225 -74111087 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 3 937 276 77 0 0 chr13 46173628 46173667 -74110645 + (CAA)n Simple_repeat Simple_repeat 1 39 0 3 937 362 353 62 81 chr13 46174381 46174617 -74109695 + ORR1E LTR MaLR 4 243 -116 3 937 2616 65 168 142 chr13 46174617 46175116 -74109196 - RLTR1B LTR ERV1 0 512 1 3 937 362 353 62 81 chr13 46175116 46175237 -74109075 + ORR1E LTR MaLR 244 354 -5 3 937 968 289 47 47 chr13 46176161 46176520 -74107792 - ORR1E LTR MaLR 0 359 1 3 937 378 0 0 0 chr13 46177151 46177193 -74107119 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 937 605 288 86 0 chr13 46177334 46177532 -74106780 - B3 SINE B2 0 216 2 3 937 271 325 0 0 chr13 46177773 46177856 -74106456 + (TATATG)n Simple_repeat Simple_repeat 6 88 0 3 937 418 235 8 40 chr13 46177927 46178051 -74106261 - ORR1D1 LTR MaLR -254 120 1 3 937 973 279 209 52 chr13 46178052 46179096 -74105216 - L1M4b LINE L1 -2316 4690 3486 3 937 465 19 0 0 chr13 46179096 46179150 -74105162 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 937 973 279 209 52 chr13 46179150 46179245 -74105067 - L1M4b LINE L1 -3521 3485 3364 3 937 1134 231 39 121 chr13 46179245 46179658 -74104654 + MTE2a LTR MaLR 1 379 0 3 937 973 279 209 52 chr13 46179658 46179927 -74104385 - L1M4b LINE L1 -3643 3363 3061 3 937 1047 62 8 0 chr13 46179930 46180060 -74104252 + B1_Mus2 SINE Alu 5 135 -12 3 937 481 271 89 19 chr13 46180215 46180429 -74103883 - L1M4b LINE L1 -4147 3187 2959 3 937 810 271 149 70 chr13 46180452 46181024 -74103288 - L1M4b LINE L1 -4439 2895 2279 3 937 229 106 106 0 chr13 46181028 46181075 -74103237 + (TCTCTG)n Simple_repeat Simple_repeat 2 53 0 3 937 610 303 41 0 chr13 46181300 46181332 -74102980 - B4 SINE B4 -22 270 234 3 937 3152 131 25 19 chr13 46181332 46181853 -74102459 - RLTR28 LTR ERVL 0 524 1 3 937 610 303 41 0 chr13 46181853 46182038 -74102274 - B4 SINE B4 -59 233 45 3 937 740 244 4 4 chr13 46182555 46182835 -74101477 + (TG)n Simple_repeat Simple_repeat 1 280 0 3 937 442 253 5 5 chr13 46182852 46183082 -74101230 + (TG)n Simple_repeat Simple_repeat 1 230 0 3 937 733 263 0 0 chr13 46183756 46183935 -74100377 - B3A SINE B2 -19 179 1 3 937 322 214 64 64 chr13 46184342 46184467 -74099845 + RLTR42-int LTR ERVK 1267 1391 -4131 3 937 677 286 91 12 chr13 46185155 46185560 -74098752 + MLT1D LTR MaLR 29 504 -1 3 937 2622 132 2 5 chr13 46185663 46186075 -74098237 - MTC LTR MaLR 0 421 11 3 937 621 194 0 0 chr13 46186779 46186944 -74097368 + (TG)n Simple_repeat Simple_repeat 2 166 0 3 937 393 248 0 0 chr13 46186959 46187088 -74097224 + (TG)n Simple_repeat Simple_repeat 2 130 0 3 937 245 295 167 0 chr13 46187153 46187309 -74097003 - B3A SINE B2 -16 182 1 3 937 216 0 0 0 chr13 46187652 46187676 -74096636 + (TC)n Simple_repeat Simple_repeat 1 24 0 3 937 433 239 50 33 chr13 46188651 46188852 -74095460 - MER44D DNA MER2_type -101 238 30 3 937 507 33 0 0 chr13 46188985 46189046 -74095266 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 3 937 1075 74 19 0 chr13 46189059 46189221 -74095091 + (TAGA)n Simple_repeat Simple_repeat 4 168 0 3 937 999 246 123 120 chr13 46190602 46190976 -74093336 + MTE2b LTR MaLR 1 375 -4 3 937 3575 128 38 31 chr13 46191022 46191625 -74092687 - Lx2B LINE L1 0 7000 6394 3 937 216 0 0 0 chr13 46192807 46192831 -74091481 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 937 405 0 0 0 chr13 46192959 46193004 -74091308 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 937 297 323 97 52 chr13 46193244 46193554 -74090758 + L1MC4 LINE L1 6959 7282 -760 3 937 483 319 78 26 chr13 46193640 46193949 -74090363 + L1M6 LINE L1 1610 1934 -4562 3 937 1246 160 0 22 chr13 46194333 46194557 -74089755 - URR1A DNA MER1_type 0 226 8 3 937 359 366 52 48 chr13 46194558 46194828 -74089484 - LTR33 LTR ERVL -173 342 72 3 937 340 300 34 60 chr13 46196319 46196436 -74087876 - MER81 DNA AcHobo 0 114 1 3 937 1132 249 107 27 chr13 46196983 46197321 -74086991 - MTD LTR MaLR -23 396 32 3 937 1027 141 104 15 chr13 46197382 46197584 -74086728 - URR1A DNA MER1_type -6 220 1 3 937 301 283 178 30 chr13 46197713 46197910 -74086402 + L1MEc LINE L1 602 827 -5573 3 937 4355 133 6 14 chr13 46197933 46198736 -74085576 - Lx4B LINE L1 -770 6288 5484 4 937 2880 135 65 34 chr13 46198709 46199216 -74085096 + Lx4B LINE L1 6248 6770 -288 4 937 272 267 55 11 chr13 46199437 46199528 -74084784 - Tigger5 DNA MER2_type -21 2385 2291 4 937 710 176 145 0 chr13 46199547 46199706 -74084606 + URR1A DNA MER1_type 1 182 -44 4 937 3064 226 34 29 chr13 46199706 46200434 -74083878 - Lx6 LINE L1 -699 6761 6030 4 937 448 252 50 0 chr13 46201145 46201269 -74083043 - B1F SINE Alu -7 142 14 4 937 247 362 90 26 chr13 46201545 46201701 -74082611 - LTR33 LTR ERVL -16 499 334 4 937 480 214 0 0 chr13 46203017 46203129 -74081183 + (TG)n Simple_repeat Simple_repeat 1 112 0 4 937 249 185 0 0 chr13 46204209 46204274 -74080038 + CT-rich Low_complexity Low_complexity 2 66 0 4 937 372 287 113 0 chr13 46204318 46204433 -74079879 + B1F SINE Alu 3 130 -19 4 937 402 232 31 31 chr13 46205256 46205354 -74078958 - PB1D10 SINE Alu -12 105 8 4 937 275 311 21 24 chr13 46207354 46207486 -74076826 - MLT1A0 LTR MaLR -19 448 256 4 937 280 285 51 37 chr13 46208469 46208598 -74075714 - B3A SINE B2 -9 207 81 4 937 21 89 0 0 chr13 46209040 46209096 -74075216 + AT_rich Low_complexity Low_complexity 1 56 0 4 937 273 182 0 0 chr13 46209331 46209386 -74074926 + (ATG)n Simple_repeat Simple_repeat 1 55 0 4 937 537 266 131 11 chr13 46209785 46209960 -74074352 + B3A SINE B2 3 198 0 4 937 235 361 116 36 chr13 46210031 46210169 -74074143 + RSINE1 SINE B4 3 151 -14 4 937 2433 149 40 5 chr13 46210176 46210581 -74073731 + MTC LTR MaLR 3 421 0 4 937 1315 44 0 13 chr13 46210601 46210831 -74073481 + (TTC)n Simple_repeat Simple_repeat 1 227 0 4 937 539 119 15 38 chr13 46210831 46210962 -74073350 + CT-rich Low_complexity Low_complexity 2 129 0 4 937 262 258 39 15 chr13 46211410 46211540 -74072772 + MER33 DNA MER1_type 182 314 -10 4 937 653 346 43 7 chr13 46211971 46212253 -74072059 - L4 LINE RTE -580 1449 1158 4 937 542 159 8 23 chr13 46212288 46212417 -74071895 + GA-rich Low_complexity Low_complexity 2 128 0 4 937 371 284 121 71 chr13 46212809 46213048 -74071264 + B4 SINE B4 24 274 -18 4 937 191 229 0 16 chr13 46213083 46213145 -74071167 + (CATATA)n Simple_repeat Simple_repeat 2 62 0 4 937 187 282 81 40 chr13 46213549 46213623 -74070689 + L2a LINE L2 3285 3361 -65 4 937 248 185 33 110 chr13 46213823 46213914 -74070398 - ORR1E LTR MaLR -5 354 271 4 937 3038 103 103 0 chr13 46214087 46214440 -74069872 + Lx3B LINE L1 6482 6857 -116 4 937 201 39 0 0 chr13 46214440 46214466 -74069846 + (TGGGGG)n Simple_repeat Simple_repeat 4 29 0 4 937 3038 103 103 0 chr13 46214466 46214558 -74069754 + Lx3B LINE L1 6858 6972 -1 4 937 906 153 11 6 chr13 46214567 46214745 -74069567 + GA-rich Low_complexity Low_complexity 1 179 0 4 937 458 65 0 0 chr13 46214745 46214807 -74069505 + (GGA)n Simple_repeat Simple_repeat 1 62 0 4 937 585 129 0 0 chr13 46214808 46214901 -74069411 + (GAAA)n Simple_repeat Simple_repeat 4 96 0 4 937 544 212 16 33 chr13 46216409 46216531 -74067781 + B1_Mur1 SINE Alu 2 121 -28 4 937 305 291 0 0 chr13 46216722 46216808 -74067504 - ALINE LINE RTE -410 207 122 4 937 207 0 0 0 chr13 46217888 46217911 -74066401 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 937 923 146 4 0 chr13 46218216 46218485 -74065827 + (CA)n Simple_repeat Simple_repeat 1 270 0 4 937 432 0 0 0 chr13 46218753 46218801 -74065511 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 937 333 0 0 0 chr13 46218801 46218837 -74065475 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 937 619 236 0 8 chr13 46218872 46218996 -74065316 - RSINE1 SINE B4 -40 125 3 4 937 781 281 185 27 chr13 46219842 46220024 -74064288 + L1MB3 LINE L1 4380 4575 -1571 4 937 1181 124 144 0 chr13 46220024 46220218 -74064094 + URR1B DNA MER1_type 1 222 -3 4 937 781 281 185 27 chr13 46220218 46220478 -74063834 + L1MB3 LINE L1 4576 4892 -1254 4 937 6477 45 24 2 chr13 46220729 46221522 -74062790 + L1Md_F2 LINE L1 5771 6580 -2 4 937 777 259 39 29 chr13 46221530 46221737 -74062575 + ID_B1 SINE B4 7 215 -9 4 937 220 306 98 16 chr13 46221920 46222043 -74062269 + B1_Mur1 SINE Alu 9 141 -8 4 937 296 282 136 54 chr13 46222078 46222354 -74061958 + L1MB3 LINE L1 5675 5968 -206 4 937 336 130 0 0 chr13 46222354 46222423 -74061889 + (GA)n Simple_repeat Simple_repeat 1 69 0 4 937 264 59 0 0 chr13 46222531 46222565 -74061747 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 4 937 253 241 45 36 chr13 46222862 46222974 -74061338 + L1MB5 LINE L1 5856 5968 -206 4 937 640 282 7 0 chr13 46223005 46223147 -74061165 + RSINE1 SINE B4 4 146 -19 4 937 1290 230 146 14 chr13 46223496 46223866 -74060446 - MTD LTR MaLR 0 419 1 4 937 445 318 87 68 chr13 46224257 46224567 -74059745 - ORR1E LTR MaLR -43 316 1 4 937 203 88 29 0 chr13 46226436 46226470 -74057842 + (TATATG)n Simple_repeat Simple_repeat 4 38 0 4 937 544 240 45 58 chr13 46226495 46226650 -74057662 - B3A SINE B2 -42 156 4 4 937 1811 149 79 42 chr13 46226884 46227403 -74056909 + RLTR31B_Mm LTR ERVK 1 497 -87 4 937 720 246 178 14 chr13 46228072 46228348 -74055964 + MTD LTR MaLR 83 403 -16 4 937 1009 106 49 6 chr13 46228401 46228563 -74055749 - B2_Mm2 SINE B2 -25 170 2 4 937 807 237 17 0 chr13 46229177 46229354 -74054958 - B3A SINE B2 -16 182 3 4 937 273 306 14 0 chr13 46229809 46229881 -74054431 + PB1D7 SINE Alu 41 113 -7 4 937 1189 56 7 0 chr13 46231119 46231263 -74053049 + B1_Mus1 SINE Alu 2 146 -2 4 937 230 0 33 0 chr13 46231263 46231293 -74053019 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 937 241 224 149 0 chr13 46231342 46231409 -74052903 - ID SINE ID -146 78 2 4 937 683 128 18 0 chr13 46231441 46231550 -74052762 - Lx7 LINE L1 -222 7474 7364 4 937 306 0 0 0 chr13 46231551 46231585 -74052727 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 937 24 32 0 0 chr13 46231595 46231626 -74052686 + AT_rich Low_complexity Low_complexity 1 31 0 4 937 425 358 7 0 chr13 46231932 46232083 -74052229 - RSINE1 SINE B4 -12 153 2 4 937 247 267 10 100 chr13 46232814 46232914 -74051398 - L1MEf LINE L1 -4797 1403 1313 4 937 414 69 0 0 chr13 46232936 46232994 -74051318 + (TATG)n Simple_repeat Simple_repeat 2 59 0 4 937 345 269 19 0 chr13 46233100 46233208 -74051104 - L1MEf LINE L1 -4901 1299 1190 4 937 571 327 121 26 chr13 46233422 46234040 -74050272 - L1MEf LINE L1 -5031 1169 493 4 937 301 392 68 16 chr13 46234177 46234426 -74049886 - L1MEf LINE L1 -5792 408 147 4 937 534 257 42 28 chr13 46234734 46234878 -74049434 + L1MEf LINE L1 102 247 -5953 4 937 781 164 6 6 chr13 46235678 46235815 -74048497 + CT-rich Low_complexity Low_complexity 25 162 0 4 937 306 0 0 0 chr13 46235815 46235849 -74048463 + (TTA)n Simple_repeat Simple_repeat 3 36 0 4 937 781 164 6 6 chr13 46235849 46235871 -74048441 + polypyrimidine Low_complexity Low_complexity 3 24 0 4 937 1320 189 170 19 chr13 46236440 46236764 -74047548 + Lx2 LINE L1 6625 6997 0 4 937 432 37 0 0 chr13 46236974 46237028 -74047284 + (GAA)n Simple_repeat Simple_repeat 1 54 0 4 937 1128 56 0 33 chr13 46237028 46237212 -74047100 + (GGA)n Simple_repeat Simple_repeat 2 179 0 4 937 983 95 14 0 chr13 46237212 46237360 -74046952 + (GAAA)n Simple_repeat Simple_repeat 1 150 0 4 937 828 191 138 0 chr13 46237361 46237550 -74046762 + B3 SINE B2 1 215 -1 4 937 222 275 12 70 chr13 46237601 46237687 -74046625 - MIRc SINE MIR -147 121 41 4 937 5962 62 7 0 chr13 46238158 46239300 -74045012 - L1Md_F2 LINE L1 -283 6299 5152 4 937 1617 139 0 32 chr13 46239300 46239583 -74044729 + L1Md_F2 LINE L1 6305 6578 -4 4 937 378 146 0 0 chr13 46239857 46239939 -74044373 + (CTTG)n Simple_repeat Simple_repeat 2 83 0 4 937 774 318 94 3 chr13 46240327 46240709 -74043603 - L1MA6 LINE L1 -14 6286 5870 4 937 243 250 13 26 chr13 46241050 46241128 -74043184 + MER5A1 DNA MER1_type 64 140 -26 4 937 643 328 86 8 chr13 46241469 46241703 -74042609 + B4A SINE B4 41 292 0 4 937 240 298 12 12 chr13 46241707 46241792 -74042520 + (CA)n Simple_repeat Simple_repeat 1 85 0 4 937 549 280 65 30 chr13 46242813 46243012 -74041300 - B4A SINE B4 -1 291 86 4 937 539 219 28 8 chr13 46243066 46243304 -74041008 + CT-rich Low_complexity Low_complexity 1 242 0 4 937 512 33 0 0 chr13 46243304 46243364 -74040948 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 4 937 377 224 104 91 chr13 46243677 46244105 -74040207 - L1MEf LINE L1 -3768 2378 1937 4 937 619 295 100 62 chr13 46244239 46244617 -74039695 + MTE2a LTR MaLR 17 419 0 4 937 481 274 85 6 chr13 46245265 46245441 -74038871 - Lx7 LINE L1 -1322 6374 6185 4 937 243 103 0 0 chr13 46245572 46245611 -74038701 + (CAAAG)n Simple_repeat Simple_repeat 1 39 0 4 937 994 325 11 22 chr13 46245615 46245974 -74038338 - Lx7 LINE L1 -382 7314 6960 4 937 2150 50 56 10 chr13 46245979 46246281 -74038031 + MTB LTR MaLR 85 400 0 4 937 2111 138 3 12 chr13 46246284 46246620 -74037692 + Lx4A LINE L1 6716 7048 -10 4 937 1064 129 11 0 chr13 46246621 46246799 -74037513 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 4 937 312 27 0 0 chr13 46246800 46246837 -74037475 + (GGAA)n Simple_repeat Simple_repeat 1 37 0 4 937 927 254 54 4 chr13 46246844 46247085 -74037227 - Lx8 LINE L1 -840 6633 6381 4 937 24 32 0 0 chr13 46247116 46247147 -74037165 + AT_rich Low_complexity Low_complexity 1 31 0 4 937 339 204 9 27 chr13 46247834 46247945 -74036367 + (TATATG)n Simple_repeat Simple_repeat 2 110 0 4 937 21 0 0 0 chr13 46248136 46248157 -74036155 + AT_rich Low_complexity Low_complexity 1 21 0 4 937 334 306 27 18 chr13 46249440 46249550 -74034762 + PB1D7 SINE Alu 10 120 0 4 937 717 321 31 52 chr13 46249675 46249888 -74034424 - B4A SINE B4 -10 282 75 4 937 432 0 0 0 chr13 46249888 46249936 -74034376 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 937 717 321 31 52 chr13 46249936 46250008 -74034304 - B4A SINE B4 -218 74 3 4 937 659 307 16 40 chr13 46250008 46250247 -74034065 - B4A SINE B4 -58 234 2 5 937 326 319 29 14 chr13 46250310 46250450 -74033862 + RSINE1 SINE B4 10 151 -14 5 937 285 264 176 0 chr13 46250889 46250980 -74033332 + MER20 DNA MER1_type 1 107 -112 5 937 248 327 89 27 chr13 46251380 46251638 -74032674 + L1MD2 LINE L1 62 335 -6212 5 937 229 167 78 65 chr13 46251741 46251818 -74032494 - MLT1A1 LTR MaLR -13 395 318 5 937 3046 184 17 9 chr13 46252392 46252924 -74031388 + Lx6 LINE L1 6338 6873 -587 5 937 610 182 18 9 chr13 46253081 46253192 -74031120 + Lx7 LINE L1 6893 7004 -692 5 937 1173 34 0 0 chr13 46253193 46253341 -74030971 + B2_Mm2 SINE B2 2 149 -46 5 937 1358 259 72 12 chr13 46253349 46253670 -74030642 + Lx6 LINE L1 6993 7332 -128 5 937 492 18 0 0 chr13 46254137 46254194 -74030118 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 937 584 271 42 92 chr13 46254933 46255257 -74029055 - MTE2a LTR MaLR -97 322 1 5 937 462 222 81 0 chr13 46255644 46255743 -74028569 + ID_B1 SINE B4 106 212 -12 5 937 214 247 229 11 chr13 46256547 46256650 -74027662 - MIR SINE MIR -93 175 52 5 937 672 178 0 0 chr13 46257995 46258175 -74026137 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 937 276 240 0 0 chr13 46258179 46258254 -74026058 + (TCTG)n Simple_repeat Simple_repeat 4 78 0 5 937 563 189 0 11 chr13 46258257 46258439 -74025873 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 937 504 182 17 0 chr13 46258453 46258629 -74025683 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 937 534 278 11 69 chr13 46258636 46258810 -74025502 - RSINE1 SINE B4 0 165 2 5 937 629 280 106 29 chr13 46259143 46259428 -74024884 - RLTR18B LTR ERVK -25 591 191 5 937 337 305 56 60 chr13 46259470 46259686 -74024626 - RLTR18 LTR ERVK -298 318 104 5 937 290 261 86 17 chr13 46259710 46259827 -74024485 - RLTR18 LTR ERVK -387 125 1 5 937 608 290 6 0 chr13 46259892 46260054 -74024258 + RSINE1 SINE B4 3 165 0 5 937 23 33 0 0 chr13 46260106 46260136 -74024176 + AT_rich Low_complexity Low_complexity 1 30 0 5 937 789 223 75 10 chr13 46260398 46260597 -74023715 - B3 SINE B2 -1 215 4 5 937 1506 98 0 0 chr13 46261980 46262556 -74021756 + (TG)n Simple_repeat Simple_repeat 1 576 0 5 937 363 202 0 0 chr13 46262556 46262665 -74021647 + GA-rich Low_complexity Low_complexity 2 110 0 5 937 457 302 62 84 chr13 46262912 46262988 -74021324 + B4A SINE B4 1 76 -216 5 937 243 0 0 0 chr13 46262988 46263015 -74021297 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 5 937 457 302 62 84 chr13 46263015 46263213 -74021099 + B4A SINE B4 77 269 -23 5 937 579 96 0 0 chr13 46263213 46263296 -74021016 + (CA)n Simple_repeat Simple_repeat 2 84 0 5 937 476 252 93 26 chr13 46263334 46263485 -74020827 - MER45A DNA Tip100 -10 168 8 5 937 302 269 43 11 chr13 46263588 46263682 -74020630 + Charlie5 DNA MER1_type 1 97 -2527 5 937 717 167 26 30 chr13 46264515 46264949 -74019363 + GA-rich Low_complexity Low_complexity 1 432 0 5 937 1322 56 0 11 chr13 46264949 46265130 -74019182 + (GGGAGA)n Simple_repeat Simple_repeat 1 179 0 5 937 485 311 74 44 chr13 46265629 46265996 -74018316 - L1M5 LINE L1 -554 5640 5263 5 937 486 313 29 46 chr13 46266307 46266545 -74017767 - ORR1E LTR MaLR -125 234 1 5 937 3774 99 21 2 chr13 46266606 46267132 -74017180 + Lx4A LINE L1 6518 7053 -5 5 937 384 22 0 0 chr13 46267133 46267178 -74017134 + (GA)n Simple_repeat Simple_repeat 1 45 0 5 937 1275 7 0 0 chr13 46267178 46267321 -74016991 + (GGGAA)n Simple_repeat Simple_repeat 2 145 0 5 937 2097 110 0 6 chr13 46267369 46267689 -74016623 - ORR1A3 LTR MaLR -8 318 1 5 937 509 189 18 6 chr13 46267772 46267937 -74016375 + (TG)n Simple_repeat Simple_repeat 2 168 0 5 938 1011 124 0 0 chr13 46269902 46270079 -74014233 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 5 938 848 105 15 0 chr13 46270079 46270212 -74014100 + (TTTC)n Simple_repeat Simple_repeat 1 135 0 5 938 992 151 6 0 chr13 46270221 46270400 -74013912 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 938 520 315 135 49 chr13 46270424 46270691 -74013621 - B4 SINE B4 0 292 3 5 938 246 128 0 0 chr13 46271324 46271363 -74012949 + (TATG)n Simple_repeat Simple_repeat 2 40 0 5 938 294 85 33 17 chr13 46271372 46271432 -74012880 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 5 938 233 158 35 0 chr13 46271489 46271546 -74012766 + (CCTA)n Simple_repeat Simple_repeat 1 59 0 5 938 206 222 26 65 chr13 46271912 46271989 -74012323 + (CAGGG)n Simple_repeat Simple_repeat 2 75 0 5 938 745 253 11 11 chr13 46273089 46273277 -74011035 + ORR1E LTR MaLR 4 191 -168 5 938 381 273 71 43 chr13 46273302 46273490 -74010822 + ORR1E LTR MaLR 166 372 -7 5 938 976 272 4 17 chr13 46274495 46274734 -74009578 + B4A SINE B4 22 257 -35 5 938 392 273 28 33 chr13 46277220 46277402 -74006910 - MTEa LTR MaLR -2 377 197 5 938 711 284 86 4 chr13 46278059 46278338 -74005974 - Lx9 LINE L1 -27 7617 7316 5 938 614 347 35 41 chr13 46278750 46279144 -74005168 + MLT1C LTR MaLR 53 444 -23 5 938 1189 283 193 11 chr13 46279321 46279859 -74004453 + Lx8 LINE L1 6628 7263 -210 5 938 22 26 0 25 chr13 46279985 46280008 -74004304 + AT_rich Low_complexity Low_complexity 1 23 0 5 938 456 250 159 43 chr13 46280008 46280171 -74004141 - B3A SINE B2 -16 182 1 5 938 22 26 0 25 chr13 46280171 46280187 -74004125 + AT_rich Low_complexity Low_complexity 1 16 0 5 938 405 0 0 0 chr13 46280682 46280727 -74003585 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 938 420 319 0 94 chr13 46280752 46280901 -74003411 - B4A SINE B4 0 292 158 5 938 607 329 5 14 chr13 46280921 46281140 -74003172 - B4A SINE B4 -73 219 3 5 938 1163 36 0 0 chr13 46282148 46282285 -74002027 + B1_Mm SINE Alu 1 137 -10 5 938 942 9 0 0 chr13 46282285 46282392 -74001920 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 5 938 614 304 87 18 chr13 46282635 46282846 -74001466 + B4 SINE B4 1 226 -66 5 938 345 222 173 0 chr13 46282846 46282927 -74001385 + RSINE1 SINE B4 3 97 -68 5 938 309 292 0 0 chr13 46282984 46283049 -74001263 + B4 SINE B4 215 279 -13 5 938 477 84 0 0 chr13 46283050 46283121 -74001191 + (CA)n Simple_repeat Simple_repeat 1 71 0 5 938 351 275 29 58 chr13 46283614 46283753 -74000559 + Tigger15a DNA TcMar 551 685 -30 5 938 479 239 0 0 chr13 46284359 46284451 -73999861 + ID_B1 SINE B4 116 207 -17 5 938 682 263 98 25 chr13 46284595 46284798 -73999514 + B4 SINE B4 1 218 -74 5 938 496 319 40 71 chr13 46285635 46285932 -73998380 + B4 SINE B4 3 290 -2 5 938 243 162 40 13 chr13 46286274 46286349 -73997963 + CT-rich Low_complexity Low_complexity 4 80 0 5 938 359 267 42 25 chr13 46286803 46286922 -73997390 - B4A SINE B4 -164 128 8 5 938 751 289 87 25 chr13 46287065 46287388 -73996924 - MER2 DNA MER2_type -1 344 2 5 938 249 139 0 0 chr13 46288008 46288051 -73996261 + (TCCC)n Simple_repeat Simple_repeat 2 44 0 5 938 584 319 14 55 chr13 46289645 46289937 -73994375 - B4A SINE B4 -11 281 2 5 938 243 259 12 0 chr13 46290916 46291001 -73993311 + (TA)n Simple_repeat Simple_repeat 2 87 0 5 938 513 0 0 0 chr13 46291241 46291298 -73993014 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 938 554 303 8 0 chr13 46291899 46292031 -73992281 - RSINE1 SINE B4 -22 143 11 5 938 2349 139 34 29 chr13 46292051 46292114 -73992198 - MTC LTR MaLR -5 416 354 5 938 987 58 0 0 chr13 46292114 46292253 -73992059 + (GTTTG)n Simple_repeat Simple_repeat 1 139 0 5 938 1488 22 0 0 chr13 46292253 46292433 -73991879 + (CTTTG)n Simple_repeat Simple_repeat 1 180 0 5 938 2349 139 34 29 chr13 46292433 46292782 -73991530 - MTC LTR MaLR -68 353 2 5 938 506 152 32 0 chr13 46293200 46293325 -73990987 + (TCCA)n Simple_repeat Simple_repeat 1 129 0 5 938 215 220 20 0 chr13 46293350 46293400 -73990912 + (TCCA)n Simple_repeat Simple_repeat 1 51 0 5 938 8131 38 16 10 chr13 46293416 46294497 -73989815 - L1Md_F2 LINE L1 -3 6579 5494 5 938 642 275 29 29 chr13 46294587 46294797 -73989515 + B3 SINE B2 1 210 -6 5 938 551 248 36 86 chr13 46295308 46295490 -73988822 - B3A SINE B2 -2 214 26 5 938 651 118 7 34 chr13 46295875 46296024 -73988288 + (TG)n Simple_repeat Simple_repeat 1 145 0 5 938 774 277 147 19 chr13 46296039 46296297 -73988015 - B4A SINE B4 0 292 2 5 938 255 279 0 0 chr13 46296330 46296391 -73987921 - tRNA-Ala-GCA tRNA tRNA -13 62 2 5 938 949 281 47 73 chr13 46298036 46298458 -73985854 + Lx8 LINE L1 7053 7463 -10 5 938 25 51 0 0 chr13 46298459 46298498 -73985814 + AT_rich Low_complexity Low_complexity 1 39 0 5 938 672 262 25 51 chr13 46298498 46298676 -73985636 + B3A SINE B2 1 180 -18 5 938 387 60 0 0 chr13 46298676 46298726 -73985586 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 938 672 262 25 51 chr13 46298726 46298744 -73985568 + B3A SINE B2 181 192 -6 5 938 260 27 27 0 chr13 46298809 46298846 -73985466 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 5 938 303 28 0 0 chr13 46299035 46299071 -73985241 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 938 324 0 0 0 chr13 46299767 46299803 -73984509 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 938 2453 125 78 0 chr13 46300142 46300567 -73983745 - RMER12 LTR ERVK -861 461 4 5 938 374 314 15 75 chr13 46300937 46301071 -73983241 - MTEa LTR MaLR -235 144 19 5 938 449 253 0 3 chr13 46301483 46301604 -73982708 + L1M2 LINE L1 4436 4557 -1586 5 938 214 299 0 38 chr13 46301606 46301686 -73982626 + RSINE1 SINE B4 2 78 -87 5 938 278 274 24 12 chr13 46301865 46301950 -73982362 + L1M2 LINE L1 4565 4650 -1490 5 938 240 191 0 0 chr13 46301962 46302009 -73982303 + MLT1E2 LTR MaLR 534 580 -47 5 938 180 152 0 0 chr13 46302256 46302289 -73982023 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 938 231 114 0 0 chr13 46302887 46302922 -73981390 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 938 558 248 14 41 chr13 46304199 46304346 -73979966 + B3A SINE B2 1 143 -55 5 938 543 78 0 0 chr13 46304355 46304432 -73979880 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 938 414 260 73 8 chr13 46304480 46304604 -73979708 + B4 SINE B4 8 139 -153 6 938 22 0 0 0 chr13 46304750 46304772 -73979540 + AT_rich Low_complexity Low_complexity 1 22 0 6 938 225 0 0 0 chr13 46304982 46305007 -73979305 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 6 938 508 303 45 29 chr13 46305045 46305290 -73979022 - L1MC1 LINE L1 -13 6320 6072 6 938 1138 250 14 104 chr13 46305393 46305750 -73978562 - MTE2b LTR MaLR -54 325 1 6 938 1484 281 49 37 chr13 46305751 46306379 -73977933 - L1MC1 LINE L1 -298 6035 5400 6 938 311 113 0 19 chr13 46306379 46306433 -73977879 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 938 1048 76 0 0 chr13 46306433 46306565 -73977747 - B1_Mus1 SINE Alu -16 132 1 6 938 850 219 35 9 chr13 46306603 46306833 -73977479 - L1MC1 LINE L1 -1201 4945 4710 6 938 234 229 0 0 chr13 46306861 46306957 -73977355 + GA-rich Low_complexity Low_complexity 1 96 0 6 938 473 217 8 0 chr13 46306981 46307110 -73977202 + GA-rich Low_complexity Low_complexity 2 131 0 6 938 318 148 0 0 chr13 46308046 46308100 -73976212 + (CAT)n Simple_repeat Simple_repeat 2 55 0 6 938 653 303 96 19 chr13 46308325 46308648 -73975664 - ORR1E LTR MaLR -11 348 1 6 938 1024 144 139 40 chr13 46308965 46309167 -73975145 + URR1A DNA MER1_type 5 226 0 6 938 1827 207 138 67 chr13 46309218 46309782 -73974530 + RMER19C LTR ERVK 138 902 0 6 938 269 311 55 47 chr13 46309797 46309925 -73974387 - LTR16B2 LTR ERVL -332 130 2 6 938 648 348 86 30 chr13 46310065 46310143 -73974169 + MLT2B2 LTR ERVL 1 75 -440 6 938 2416 95 3 6 chr13 46310143 46310471 -73973841 - ORR1A2 LTR MaLR 0 327 1 6 938 648 348 86 30 chr13 46310471 46310754 -73973558 + MLT2B2 LTR ERVL 76 382 -133 6 938 252 259 0 0 chr13 46311453 46311511 -73972801 + B1F2 SINE Alu 3 60 -89 6 938 759 229 60 64 chr13 46311739 46312076 -73972236 - MTEa LTR MaLR -23 356 3 6 938 671 274 56 142 chr13 46312148 46312404 -73971908 - MTE2b LTR MaLR -12 367 139 6 938 441 0 0 0 chr13 46312404 46312453 -73971859 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 938 671 274 56 142 chr13 46312453 46312591 -73971721 - MTE2b LTR MaLR -241 138 7 6 938 331 160 13 13 chr13 46313285 46313361 -73970951 + GA-rich Low_complexity Low_complexity 2 77 0 6 938 969 290 60 40 chr13 46314443 46314833 -73969479 + MTD LTR MaLR 1 397 -22 6 938 358 288 18 18 chr13 46315314 46315427 -73968885 + B4A SINE B4 33 145 -147 6 938 605 279 38 38 chr13 46315930 46316142 -73968170 + ID_B1 SINE B4 3 214 -10 6 938 764 144 104 18 chr13 46316142 46316305 -73968007 - URR1A DNA MER1_type -13 213 37 6 938 202 258 109 40 chr13 46316369 46316470 -73967842 + MIR SINE MIR 46 153 -109 6 938 354 286 0 0 chr13 46318238 46318322 -73965990 - B4A SINE B4 -208 84 1 6 938 5858 213 77 44 chr13 46318736 46320236 -73964076 + Lx9 LINE L1 6092 7641 -3 6 938 22 80 0 0 chr13 46320839 46320889 -73963423 + AT_rich Low_complexity Low_complexity 1 50 0 6 938 189 0 0 0 chr13 46320910 46320931 -73963381 + (T)n Simple_repeat Simple_repeat 1 21 0 6 938 1219 55 0 0 chr13 46320931 46321077 -73963235 - B1_Mus2 SINE Alu 0 147 2 6 938 1460 222 50 20 chr13 46321296 46321692 -73962620 - MTD LTR MaLR 0 419 12 6 938 273 265 36 12 chr13 46321954 46322038 -73962274 + MTEb LTR MaLR 280 365 -14 6 938 235 356 50 17 chr13 46322215 46322335 -73961977 - L1MD2 LINE L1 -5860 687 564 6 938 2164 167 82 0 chr13 46323411 46323800 -73960512 - MTC LTR MaLR 0 421 1 6 938 626 226 110 0 chr13 46323866 46324030 -73960282 - B3A SINE B2 -16 182 1 6 938 476 277 12 49 chr13 46324086 46324253 -73960059 - MTEa LTR MaLR 0 379 208 6 938 703 276 68 5 chr13 46324391 46324613 -73959699 - MTEa LTR MaLR -126 253 18 6 938 309 311 22 146 chr13 46324759 46325026 -73959286 - L1MC5 LINE L1 -1089 6872 6639 6 938 267 31 0 0 chr13 46325042 46325074 -73959238 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 938 695 239 29 86 chr13 46325555 46325765 -73958547 - B3A SINE B2 0 198 1 6 938 249 33 0 0 chr13 46327659 46327689 -73956623 + (CATA)n Simple_repeat Simple_repeat 3 32 0 6 938 248 250 0 0 chr13 46327792 46327844 -73956468 + (TATG)n Simple_repeat Simple_repeat 1 52 0 6 938 290 241 12 71 chr13 46328455 46328540 -73955772 + MTE2b LTR MaLR 19 98 -281 6 938 707 194 290 12 chr13 46328555 46328800 -73955512 + MTE2b LTR MaLR 67 379 0 6 938 208 119 237 0 chr13 46329362 46329480 -73954832 + (ACTAG)n Simple_repeat Simple_repeat 4 149 0 6 938 2736 63 0 17 chr13 46329742 46330097 -73954215 + L1_Mus1 LINE L1 6219 6567 0 6 938 348 43 0 0 chr13 46330348 46330394 -73953918 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 6 938 1229 238 91 17 chr13 46330397 46330770 -73953542 + MTD LTR MaLR 13 405 -14 6 938 3235 50 7 26 chr13 46330851 46331266 -73953046 - MTB_Mm LTR MaLR 0 407 1 6 938 5696 140 81 22 chr13 46331266 46332438 -73951874 - MTB_Mm-int LTR MaLR 0 1258 18 6 938 3036 76 0 35 chr13 46332443 46332865 -73951447 - MTB_Mm LTR MaLR 0 407 1 6 938 1176 267 21 10 chr13 46333338 46333626 -73950686 + B4 SINE B4 2 292 0 6 938 297 0 0 0 chr13 46334486 46334519 -73949793 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 938 371 177 16 0 chr13 46334520 46334582 -73949730 - RSINE1 SINE B4 -42 123 61 6 938 1550 248 44 11 chr13 46334686 46335053 -73949259 - MTEa LTR MaLR 0 379 1 6 938 292 342 24 37 chr13 46335490 46335654 -73948658 + MLT1L LTR MaLR 87 248 -362 6 938 253 280 51 51 chr13 46336054 46336133 -73948179 + ID4 SINE ID 2 80 -3 6 938 312 336 65 0 chr13 46336156 46336263 -73948049 + Tigger5 DNA MER2_type 72 185 -2221 6 938 870 286 53 67 chr13 46336761 46337117 -73947195 + ORR1E LTR MaLR 6 356 -3 6 938 520 272 22 7 chr13 46337653 46337790 -73946522 + B1F2 SINE Alu 4 142 -7 6 938 230 247 0 13 chr13 46337793 46337871 -73946441 + GA-rich Low_complexity Low_complexity 3 79 0 6 938 684 36 0 0 chr13 46338439 46338522 -73945790 + (TCTCCC)n Simple_repeat Simple_repeat 6 88 0 6 938 339 300 33 0 chr13 46339295 46339385 -73944927 + B4 SINE B4 82 174 -118 6 938 729 70 0 0 chr13 46340176 46340276 -73944036 + (GA)n Simple_repeat Simple_repeat 2 101 0 6 938 510 282 47 6 chr13 46341896 46342067 -73942245 - L1M2 LINE L1 -624 5667 5490 6 938 1125 259 36 10 chr13 46342118 46342426 -73941886 - ORR1E LTR MaLR -3 356 41 6 938 859 304 63 45 chr13 46342863 46343197 -73941115 + MTEa LTR MaLR 40 379 0 6 938 288 0 0 0 chr13 46344429 46344461 -73939851 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 938 373 323 62 46 chr13 46344558 46344616 -73939696 - B4 SINE B4 -2 290 232 6 938 2484 95 3 0 chr13 46344616 46344941 -73939371 - ORR1A3 LTR MaLR 0 326 1 6 938 373 323 62 46 chr13 46344941 46344957 -73939355 - B4 SINE B4 -61 231 221 6 938 932 25 8 0 chr13 46344957 46345076 -73939236 + (TC)n Simple_repeat Simple_repeat 1 120 0 6 938 373 323 62 46 chr13 46345076 46345130 -73939182 - B4 SINE B4 -72 220 161 6 938 653 229 74 25 chr13 46345638 46345840 -73938472 + B3 SINE B2 5 216 0 6 938 203 203 147 13 chr13 46346259 46346334 -73937978 - MIRm SINE MIR -86 190 106 6 938 299 336 28 28 chr13 46346337 46346478 -73937834 + MLT1A0 LTR MaLR 10 150 -215 6 938 568 183 43 0 chr13 46346498 46346662 -73937650 + (TCTA)n Simple_repeat Simple_repeat 2 172 0 6 938 288 356 60 20 chr13 46346672 46346821 -73937491 + MLT1A0 LTR MaLR 222 376 -14 6 938 419 176 0 8 chr13 46347427 46347553 -73936759 + CT-rich Low_complexity Low_complexity 2 126 0 6 938 242 228 35 0 chr13 46347553 46347610 -73936702 + MTEa LTR MaLR 313 371 -8 6 938 303 0 64 0 chr13 46347750 46347797 -73936515 + (CAAAA)n Simple_repeat Simple_repeat 3 52 0 6 938 962 296 7 11 chr13 46348157 46348437 -73935875 + B4A SINE B4 1 279 -13 6 938 266 0 29 0 chr13 46348473 46348507 -73935805 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 938 1040 235 102 75 chr13 46348535 46348984 -73935328 + RMER4B LTR ERVK 15 550 -61 6 938 537 16 0 0 chr13 46349059 46349121 -73935191 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 938 305 307 82 0 chr13 46350141 46350309 -73934003 - L1M5 LINE L1 -633 5811 5627 6 938 348 43 0 0 chr13 46350363 46350409 -73933903 + (CGTG)n Simple_repeat Simple_repeat 1 46 0 6 938 617 237 0 7 chr13 46350409 46350549 -73933763 - B3A SINE B2 -59 139 1 6 938 1098 253 97 49 chr13 46350585 46351030 -73933282 + RMER13A LTR ERVK 30 495 -365 6 938 519 324 71 41 chr13 46351470 46351808 -73932504 + ORR1E LTR MaLR 1 348 -11 6 938 255 314 75 0 chr13 46352172 46352331 -73931981 + L2 LINE L2 2411 2581 -838 6 938 180 326 20 40 chr13 46352434 46352533 -73931779 + L2 LINE L2 2728 2824 -595 6 938 556 232 21 28 chr13 46353803 46353945 -73930367 - B1F SINE Alu -8 141 1 6 938 201 74 0 0 chr13 46354160 46354187 -73930125 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 938 303 254 48 61 chr13 46354233 46354380 -73929932 - L1MEc LINE L1 -5207 1193 1049 6 938 319 233 0 127 chr13 46354387 46354505 -73929807 + MT2B LTR ERVL 155 257 -344 6 938 886 153 0 14 chr13 46354405 46354551 -73929761 + B1_Mur4 SINE Alu 6 149 -1 6 938 228 162 0 0 chr13 46354552 46354589 -73929723 + A-rich Low_complexity Low_complexity 1 37 0 6 938 730 251 158 70 chr13 46354683 46355068 -73929244 + MTD LTR MaLR 1 419 0 6 938 297 313 137 48 chr13 46355469 46355908 -73928404 - L1MEc LINE L1 -5825 575 98 6 938 995 95 72 5 chr13 46356055 46356216 -73928096 - MERVL-int LTR ERVL -2699 3062 2795 6 938 24 0 0 0 chr13 46356222 46356246 -73928066 + AT_rich Low_complexity Low_complexity 1 24 0 6 938 3832 126 3 10 chr13 46356247 46356865 -73927447 - RLTR17 LTR ERVK -78 614 1 6 938 7639 157 44 48 chr13 46356866 46358400 -73925912 - MERVL-int LTR ERVL -2683 2802 1276 6 938 893 218 166 27 chr13 46358400 46358701 -73925611 + ORR1D2 LTR MaLR 25 367 -3 6 938 25 31 0 0 chr13 46358822 46358854 -73925458 + AT_rich Low_complexity Low_complexity 1 32 0 6 938 440 277 60 23 chr13 46358970 46359103 -73925209 - B1_Mur2 SINE Alu -11 138 1 6 938 555 288 163 31 chr13 46359182 46359440 -73924872 - B4A SINE B4 0 292 1 6 938 23 0 0 0 chr13 46359537 46359560 -73924752 + AT_rich Low_complexity Low_complexity 1 23 0 6 938 7729 152 5 40 chr13 46359585 46360919 -73923393 - MERVL-int LTR ERVL -4197 1288 1 6 938 1993 127 3 3 chr13 46360925 46361242 -73923070 - ORR1A2 LTR MaLR -10 317 1 6 938 624 189 15 30 chr13 46361312 46361588 -73922724 + (TCTA)n Simple_repeat Simple_repeat 1 271 0 7 938 252 59 0 0 chr13 46361591 46361625 -73922687 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 938 908 84 0 8 chr13 46362223 46362355 -73921957 + (TTCTCC)n Simple_repeat Simple_repeat 5 135 0 7 938 1223 48 0 0 chr13 46362355 46362500 -73921812 - B1_Mus1 SINE Alu -2 146 2 7 938 299 134 36 12 chr13 46362780 46362863 -73921449 + (TG)n Simple_repeat Simple_repeat 1 85 0 7 938 864 263 37 41 chr13 46362870 46362889 -73921423 - B4A SINE B4 -3 289 272 7 938 2282 75 8 111 chr13 46362889 46363249 -73921063 - ORR1A2 LTR MaLR 0 327 5 7 938 864 263 37 41 chr13 46363249 46363499 -73920813 - B4A SINE B4 -21 271 21 7 938 25 0 0 0 chr13 46364011 46364036 -73920276 + AT_rich Low_complexity Low_complexity 1 25 0 7 938 964 196 30 5 chr13 46365043 46365243 -73919069 + B3 SINE B2 1 205 -11 7 938 351 0 0 0 chr13 46365244 46365283 -73919029 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 7 938 939 186 0 0 chr13 46365541 46365805 -73918507 + (CA)n Simple_repeat Simple_repeat 1 264 0 7 938 648 337 40 15 chr13 46366012 46366286 -73918026 - MER58B DNA MER1_type -16 325 45 7 938 316 266 4 13 chr13 46366811 46367047 -73917265 + GA-rich Low_complexity Low_complexity 1 233 0 7 938 209 283 0 36 chr13 46367218 46367273 -73917039 + C-rich Low_complexity Low_complexity 2 54 0 7 938 225 250 50 89 chr13 46367861 46367962 -73916350 + MT2B2 LTR ERVL 142 238 -346 7 938 440 246 108 31 chr13 46367889 46368019 -73916293 + B1F SINE Alu 10 149 0 7 938 471 200 11 0 chr13 46368046 46368136 -73916176 + ID_B1 SINE B4 104 194 -30 7 938 326 247 20 10 chr13 46368051 46368149 -73916163 + B1_Mus1 SINE Alu 29 127 -21 7 938 188 286 12 83 chr13 46368287 46368371 -73915941 + MIR SINE MIR 48 125 -83 7 938 459 0 0 0 chr13 46369402 46369453 -73914859 + (GGGGA)n Simple_repeat Simple_repeat 2 52 0 7 938 408 318 53 0 chr13 46370226 46370358 -73913954 + RSINE1 SINE B4 15 153 -12 7 938 836 219 76 5 chr13 46370977 46371174 -73913138 + ID_B1 SINE B4 1 211 -13 7 938 509 242 257 19 chr13 46372095 46372356 -73911956 - MTE2a LTR MaLR 0 379 57 7 938 203 321 35 44 chr13 46372356 46372470 -73911842 + MIRb SINE MIR 105 217 -51 7 938 387 0 0 0 chr13 46373248 46373291 -73911021 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 7 938 381 22 0 0 chr13 46373550 46373596 -73910716 + (GA)n Simple_repeat Simple_repeat 2 47 0 7 938 322 260 0 0 chr13 46373770 46373843 -73910469 - B4A SINE B4 -1 291 219 7 938 603 224 0 0 chr13 46373876 46374001 -73910311 - RSINE1 SINE B4 -37 128 4 7 938 741 305 34 8 chr13 46374001 46374225 -73910087 - B4A SINE B4 -61 231 2 7 938 1059 75 0 0 chr13 46374500 46374646 -73909666 + (CA)n Simple_repeat Simple_repeat 2 147 0 7 938 1068 236 72 78 chr13 46375769 46376169 -73908143 + MTD LTR MaLR 18 415 -4 7 938 294 87 0 0 chr13 46376174 46376220 -73908092 + (TC)n Simple_repeat Simple_repeat 1 46 0 7 938 1943 148 0 0 chr13 46376307 46376617 -73907695 + MTC LTR MaLR 112 421 0 7 938 725 299 41 19 chr13 46377376 46377642 -73906670 - L1MB8 LINE L1 -282 5896 5625 7 938 791 290 47 65 chr13 46377994 46378381 -73905931 - MLT2C1 LTR ERVL 0 397 18 7 938 232 320 12 82 chr13 46378663 46378748 -73905564 + ID2 SINE ID 4 82 -1 7 938 1993 324 95 64 chr13 46378756 46380039 -73904273 - MTE-int LTR MaLR -217 1363 41 7 938 323 250 50 0 chr13 46380412 46380492 -73903820 - ORR1E LTR MaLR -274 85 2 7 938 303 283 42 48 chr13 46380492 46380637 -73903675 - MLT1D LTR MaLR -309 196 53 7 938 638 246 0 0 chr13 46381616 46381742 -73902570 + B3A SINE B2 1 126 -72 7 938 544 339 59 21 chr13 46381789 46382027 -73902285 - B4A SINE B4 -5 287 41 7 938 995 257 68 76 chr13 46382120 46382490 -73901822 + MTEa LTR MaLR 13 379 0 7 938 293 293 79 92 chr13 46382781 46383010 -73901302 + MIRb SINE MIR 42 267 -1 7 938 281 310 34 34 chr13 46384151 46384268 -73900044 + RSINE1 SINE B4 49 165 0 7 938 291 161 0 0 chr13 46384276 46384332 -73899980 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 938 715 92 13 60 chr13 46384336 46384487 -73899825 + (TAGA)n Simple_repeat Simple_repeat 2 145 0 7 938 274 143 16 16 chr13 46384589 46384653 -73899659 + (TG)n Simple_repeat Simple_repeat 1 64 0 7 938 719 307 57 64 chr13 46384679 46384961 -73899351 - B4A SINE B4 -12 280 1 7 938 250 319 11 29 chr13 46385743 46385793 -73898519 + (TATG)n Simple_repeat Simple_repeat 2 50 0 7 938 279 0 0 0 chr13 46385793 46385824 -73898488 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 7 938 250 319 11 29 chr13 46385824 46385947 -73898365 + (TATG)n Simple_repeat Simple_repeat 4 125 0 7 938 458 288 86 128 chr13 46385952 46386195 -73898117 - B4 SINE B4 0 292 60 7 938 247 89 64 43 chr13 46386444 46386491 -73897821 - URR1B DNA MER1_type 0 225 178 7 938 1101 189 10 0 chr13 46386474 46386675 -73897637 + RLTR28B LTR ERVL 270 472 -9 7 938 651 278 42 16 chr13 46386638 46386858 -73897454 - MTE2b LTR MaLR -78 301 84 7 938 1534 133 57 0 chr13 46386857 46387120 -73897192 - RLTR28B LTR ERVL -203 278 1 7 938 336 198 94 0 chr13 46387122 46387218 -73897094 + MTE2a LTR MaLR 263 367 -12 7 938 237 159 0 0 chr13 46387671 46387715 -73896597 + (TAGGG)n Simple_repeat Simple_repeat 1 44 0 7 938 315 291 53 35 chr13 46388535 46388649 -73895663 - PB1D10 SINE Alu 0 117 2 7 938 502 244 0 80 chr13 46389076 46389110 -73895202 + B4A SINE B4 178 205 -87 7 938 2005 184 62 32 chr13 46389110 46389515 -73894797 + MTC LTR MaLR 1 417 -4 7 938 502 244 0 80 chr13 46389515 46389605 -73894707 + B4A SINE B4 206 292 0 7 938 765 262 82 10 chr13 46390563 46390771 -73893541 - ID_B1 SINE B4 0 224 2 7 938 752 234 104 0 chr13 46391335 46391527 -73892785 + B3 SINE B2 1 212 -4 7 938 440 289 7 53 chr13 46392303 46392453 -73891859 - B4 SINE B4 -147 145 3 7 938 288 0 0 0 chr13 46392522 46392554 -73891758 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 938 330 327 81 64 chr13 46392653 46392888 -73891424 + B4A SINE B4 48 286 -6 7 938 297 0 0 0 chr13 46392903 46392936 -73891376 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 938 282 193 0 0 chr13 46393725 46393782 -73890530 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 938 777 252 104 0 chr13 46396113 46396315 -73887997 + ID_B1 SINE B4 2 224 0 7 938 306 0 0 0 chr13 46396387 46396421 -73887891 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 938 794 316 69 9 chr13 46397452 46397771 -73886541 + MER2 DNA MER2_type 1 338 -7 7 117 10004 158 34 12 chr13 46398208 46400919 -73883393 + L1_Mur3 LINE L1 279 3041 -2839 7 939 3535 150 33 26 chr13 46400914 46401417 -73882895 + L1_Mur3 LINE L1 4120 4622 -1258 7 939 387 0 0 0 chr13 46401417 46401460 -73882852 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 939 3535 150 33 26 chr13 46401460 46401586 -73882726 + L1_Mur3 LINE L1 4623 4742 -1138 7 939 306 0 0 0 chr13 46401586 46401620 -73882692 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 939 3535 150 33 26 chr13 46401620 46401682 -73882630 + L1_Mur3 LINE L1 4743 4816 -1064 7 939 3708 91 60 5 chr13 46402289 46402985 -73881327 - L1_Mm LINE L1 -2599 3284 2508 7 939 8182 83 55 49 chr13 46402981 46405151 -73879161 + L1VL2 LINE L1 46 2216 -1399 7 939 499 312 163 39 chr13 46405254 46405591 -73878721 + MTEa LTR MaLR 1 379 0 7 939 611 257 113 49 chr13 46406421 46406687 -73877625 - B4 SINE B4 -3 289 7 7 939 356 226 104 0 chr13 46406784 46406899 -73877413 + L2a LINE L2 1481 1607 -1812 7 939 214 327 19 28 chr13 46407493 46407600 -73876712 + L2a LINE L2 2485 2590 -829 7 939 315 122 0 0 chr13 46407670 46407719 -73876593 + (TTA)n Simple_repeat Simple_repeat 2 50 0 7 939 418 246 107 131 chr13 46407719 46407925 -73876387 - B4 SINE B4 -80 212 12 7 939 377 340 121 29 chr13 46407932 46408347 -73875965 + L2a LINE L2 2575 3027 -392 7 939 272 301 66 22 chr13 46408536 46408672 -73875640 + L2a LINE L2 3285 3426 0 7 939 257 277 137 10 chr13 46410552 46410654 -73873658 + MER5B DNA MER1_type 61 175 -3 7 939 26 50 0 0 chr13 46411265 46411305 -73873007 + AT_rich Low_complexity Low_complexity 1 40 0 7 939 843 206 27 16 chr13 46411306 46411489 -73872823 - B3A SINE B2 -13 185 1 7 939 297 0 0 0 chr13 46411674 46411707 -73872605 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 939 366 91 0 0 chr13 46411707 46411761 -73872551 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 939 3420 35 2 0 chr13 46411923 46412318 -73871994 + MTA_Mm LTR MaLR 1 396 0 7 939 9520 22 3 4 chr13 46412318 46413417 -73870895 + MTA_Mm-int LTR MaLR 1 1098 0 7 939 3407 38 2 0 chr13 46413417 46413812 -73870500 + MTA_Mm LTR MaLR 1 396 0 7 939 247 342 34 80 chr13 46413935 46414110 -73870202 + MER5B DNA MER1_type 1 167 -11 7 939 391 233 148 97 chr13 46414267 46414443 -73869869 - B3A SINE B2 0 198 14 7 939 765 275 15 0 chr13 46414554 46414754 -73869558 + ID_B1 SINE B4 1 203 -21 7 939 408 263 99 3 chr13 46414811 46414935 -73869377 + B1F1 SINE Alu 5 139 -10 7 939 360 0 0 0 chr13 46414935 46414975 -73869337 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 939 418 319 62 67 chr13 46415020 46415426 -73868886 + RLTR11A2 LTR ERVK 116 519 -8 7 939 24 91 0 0 chr13 46415679 46415745 -73868567 + AT_rich Low_complexity Low_complexity 1 66 0 7 939 620 244 2 78 chr13 46416092 46416291 -73868021 + MYSERV6-int LTR ERVK 3750 4147 -4812 7 939 16951 55 0 0 chr13 46416293 46418372 -73865940 + L1Md_F2 LINE L1 3508 5586 -297 7 939 8125 49 2 30 chr13 46418372 46419412 -73864900 + L1Md_F2 LINE L1 5587 6582 0 7 939 431 275 124 8 chr13 46419415 46419655 -73864657 + MYSERV-int LTR ERVK 4227 4407 -4552 7 939 729 129 0 0 chr13 46419656 46419795 -73864517 + (GA)n Simple_repeat Simple_repeat 2 140 0 7 939 2568 269 44 34 chr13 46419795 46420712 -73863600 + MYSERV-int LTR ERVK 4199 5165 -95 7 939 252 321 40 64 chr13 46420742 46420915 -73863397 + RMER4A LTR ERVK 255 423 -43 7 939 640 226 15 73 chr13 46420920 46421125 -73863187 + MYSERV-int LTR ERVK 5312 5504 -1046 7 939 1441 110 9 0 chr13 46421140 46421359 -73862953 - ORR1A2 LTR MaLR 0 327 107 7 939 710 82 0 0 chr13 46421369 46421467 -73862845 + ORR1A3 LTR MaLR 229 326 0 7 939 686 191 22 44 chr13 46421482 46421663 -73862649 - MYSERV-int LTR ERVK -1046 5504 5328 8 939 682 93 8 8 chr13 46421664 46421783 -73862529 - ORR1A2 LTR MaLR -227 119 1 7 939 4779 181 18 53 chr13 46421783 46422801 -73861511 + MYSERV6-int LTR ERVK 7978 8959 0 8 939 447 292 102 106 chr13 46422820 46423312 -73861000 + RLTR11A2 LTR ERVK 39 518 -9 8 939 261 57 0 0 chr13 46423312 46423347 -73860965 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 939 459 298 8 0 chr13 46423451 46423582 -73860730 + ORR1E LTR MaLR 9 140 -219 8 939 371 169 116 63 chr13 46423646 46423741 -73860571 + ORR1E LTR MaLR 272 371 -8 8 939 945 219 139 50 chr13 46423901 46424218 -73860094 + ORR1D2 LTR MaLR 26 370 0 8 939 23 0 0 0 chr13 46424790 46424813 -73859499 + AT_rich Low_complexity Low_complexity 1 23 0 8 939 875 175 194 0 chr13 46425343 46425549 -73858763 - RMER4B LTR ERVK -21 564 319 8 939 681 204 0 0 chr13 46425549 46425721 -73858591 + CT-rich Low_complexity Low_complexity 1 172 0 8 939 1485 153 13 139 chr13 46425721 46426109 -73858203 - RMER4B LTR ERVK -246 339 1 8 939 518 249 61 113 chr13 46427013 46427226 -73857086 + MTEa LTR MaLR 158 377 -2 8 939 23 0 0 0 chr13 46427256 46427279 -73857033 + AT_rich Low_complexity Low_complexity 1 23 0 8 939 201 74 0 0 chr13 46427720 46427747 -73856565 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 939 1210 210 62 46 chr13 46427747 46428071 -73856241 - ORR1E LTR MaLR -28 331 3 8 939 404 233 12 0 chr13 46429066 46429152 -73855160 - PB1D7 SINE Alu -29 91 5 8 939 231 152 43 0 chr13 46429192 46429238 -73855074 + B3A SINE B2 1 48 -150 8 939 351 0 0 0 chr13 46429307 46429346 -73854966 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 939 1447 150 142 50 chr13 46429540 46429940 -73854372 + RMER10A LTR ERVL 1 437 -5 8 939 216 226 97 0 chr13 46430237 46430299 -73854013 - B1_Mus2 SINE Alu -58 89 22 8 939 327 250 0 0 chr13 46431299 46431479 -73852833 + (TAG)n Simple_repeat Simple_repeat 1 180 0 8 939 5699 80 28 14 chr13 46431492 46432282 -73852030 - Lx3B LINE L1 -2 6971 6171 8 939 754 260 46 0 chr13 46432360 46432533 -73851779 - B3 SINE B2 -5 211 31 8 939 898 275 56 37 chr13 46432597 46432952 -73851360 - MLT1A0 LTR MaLR 0 365 4 8 939 310 260 50 30 chr13 46433744 46433843 -73850469 + MLT1H2 LTR MaLR 389 489 0 8 939 215 224 20 0 chr13 46434115 46434164 -73850148 + CT-rich Low_complexity Low_complexity 1 50 0 8 939 441 226 0 10 chr13 46434180 46434291 -73850021 - B1F1 SINE Alu -11 109 1 8 939 205 75 24 24 chr13 46434364 46434405 -73849907 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 8 939 357 269 232 32 chr13 46434811 46435061 -73849251 - MLT1B LTR MaLR -34 356 57 8 939 452 255 10 0 chr13 46435066 46435168 -73849144 + MTEa LTR MaLR 1 103 -276 8 939 815 281 7 149 chr13 46435315 46435745 -73848567 + ORR1D2 LTR MaLR 1 369 -1 8 939 656 292 32 108 chr13 46437363 46437678 -73846634 + B4 SINE B4 2 292 0 8 939 999 262 8 16 chr13 46438191 46438435 -73845877 + B4A SINE B4 1 242 -50 8 939 312 27 0 0 chr13 46438505 46438542 -73845770 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 939 204 146 0 24 chr13 46439252 46439294 -73845018 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 8 939 693 199 20 47 chr13 46439321 46439469 -73844843 - B1F SINE Alu -1 148 5 8 939 354 336 24 16 chr13 46440190 46440314 -73843998 + MLT1G1 LTR MaLR 215 339 -240 8 939 1176 234 108 36 chr13 46440444 46440832 -73843480 - MTD LTR MaLR -14 405 1 8 939 296 364 14 14 chr13 46441147 46441292 -73843020 - MER5B DNA MER1_type -4 174 30 8 939 1309 232 22 70 chr13 46441576 46441946 -73842366 - ORR1E LTR MaLR -6 353 2 8 939 1290 135 46 18 chr13 46442781 46443000 -73841312 + URR1B DNA MER1_type 1 225 0 8 939 285 302 0 19 chr13 46443316 46443430 -73840882 + MLT1G1 LTR MaLR 313 421 -27 8 939 432 0 0 0 chr13 46443736 46443784 -73840528 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 8 939 201 163 0 0 chr13 46446399 46446448 -73837864 + (TCTCTG)n Simple_repeat Simple_repeat 6 54 0 8 939 207 326 98 23 chr13 46446530 46446662 -73837650 - MIR SINE MIR -100 162 21 8 939 384 338 40 20 chr13 46446818 46446966 -73837346 + MER20 DNA MER1_type 13 163 -56 8 939 243 305 0 0 chr13 46447591 46447650 -73836662 + polypurine Low_complexity Low_complexity 5 63 0 8 939 22 0 0 0 chr13 46447824 46447846 -73836466 + AT_rich Low_complexity Low_complexity 1 22 0 8 939 251 204 28 84 chr13 46447935 46448042 -73836270 + ORSL DNA Tip100 134 234 -41 8 939 333 233 0 0 chr13 46448335 46448425 -73835887 + GA-rich Low_complexity Low_complexity 2 91 0 8 939 444 148 0 0 chr13 46450368 46450476 -73833836 + (T)n Simple_repeat Simple_repeat 1 108 0 8 939 519 256 21 35 chr13 46451145 46451287 -73833025 + B1F SINE Alu 1 140 -9 8 939 336 164 0 0 chr13 46451589 46451656 -73832656 + GA-rich Low_complexity Low_complexity 3 69 0 8 939 1827 189 28 6 chr13 46451843 46452204 -73832108 + MTD LTR MaLR 51 419 0 8 939 201 147 0 0 chr13 46452328 46452362 -73831950 + (TATG)n Simple_repeat Simple_repeat 2 35 0 8 939 1228 41 0 0 chr13 46452363 46452509 -73831803 - B1_Mus2 SINE Alu -1 146 1 8 939 524 254 8 23 chr13 46452512 46452645 -73831667 - B3 SINE B2 -3 213 83 8 939 6266 50 14 1 chr13 46452861 46453628 -73830684 - L1_Mus1 LINE L1 -3 6564 5788 8 939 1510 114 0 0 chr13 46453628 46453847 -73830465 + L1_Mm LINE L1 5217 5435 -448 8 939 1950 167 18 43 chr13 46453857 46453976 -73830336 + RLTR25B LTR ERVK 3 126 -902 8 939 207 0 0 0 chr13 46453976 46453999 -73830313 + (TG)n Simple_repeat Simple_repeat 2 24 0 8 939 1950 167 18 43 chr13 46453999 46454274 -73830038 + RLTR25B LTR ERVK 127 386 -642 8 939 912 60 15 7 chr13 46454358 46454493 -73829819 - RLTR25B LTR ERVK -352 676 541 8 939 305 169 45 15 chr13 46455715 46455781 -73828531 - B1_Mur4 SINE Alu -1 149 82 8 939 423 234 36 0 chr13 46455806 46455917 -73828395 + L1MA4 LINE L1 5790 5904 -396 8 939 270 0 0 0 chr13 46455934 46455964 -73828348 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 939 181 203 0 59 chr13 46457088 46457156 -73827156 + (CATA)n Simple_repeat Simple_repeat 4 67 0 8 939 208 234 0 41 chr13 46458538 46458587 -73825725 + polypurine Low_complexity Low_complexity 1 47 0 8 939 477 0 0 0 chr13 46458735 46458788 -73825524 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 939 618 14 0 0 chr13 46459593 46459664 -73824648 + (GA)n Simple_repeat Simple_repeat 1 71 0 8 939 306 277 0 0 chr13 46460217 46460336 -73823976 + CT-rich Low_complexity Low_complexity 2 120 0 8 939 788 341 52 30 chr13 46460592 46461093 -73823219 - Arthur1B DNA Tip100 -138 1087 576 8 939 3862 159 87 17 chr13 46461197 46461969 -73822343 - RMER19B LTR ERVK 0 902 77 8 939 373 257 70 17 chr13 46462124 46462239 -73822073 - Arthur1B DNA Tip100 -1077 148 28 8 939 184 333 0 37 chr13 46463439 46463520 -73820792 - L2c LINE L2 -50 3337 3260 8 939 273 321 49 65 chr13 46463709 46464016 -73820296 - L2c LINE L2 -440 2979 2678 8 939 608 309 13 68 chr13 46466893 46467129 -73817183 - ID_B1 SINE B4 -1 223 1 8 939 252 163 33 121 chr13 46467146 46467237 -73817075 - PB1 SINE Alu -1 126 44 8 939 665 236 168 72 chr13 46467236 46467528 -73816784 + MTEa LTR MaLR 6 325 -54 8 939 366 129 0 0 chr13 46468579 46468641 -73815671 + (CA)n Simple_repeat Simple_repeat 2 63 0 8 939 749 232 87 39 chr13 46468705 46468911 -73815401 - B3 SINE B2 0 216 1 8 939 421 266 35 0 chr13 46468914 46469027 -73815285 - PB1D10 SINE Alu 0 117 1 8 939 444 19 0 0 chr13 46469780 46469833 -73814479 + (CA)n Simple_repeat Simple_repeat 1 53 0 8 939 491 327 46 9 chr13 46469858 46470074 -73814238 - ID_B1 SINE B4 0 224 1 8 939 690 274 173 11 chr13 46470074 46470450 -73813862 - L1MC1 LINE L1 -8 6325 5889 8 939 766 251 81 46 chr13 46470925 46471037 -73813275 - L1_Rod LINE L1 0 5847 5719 8 939 315 0 0 0 chr13 46471037 46471072 -73813240 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 939 766 251 81 46 chr13 46471072 46471243 -73813069 - L1_Rod LINE L1 -129 5718 5554 8 939 895 250 91 34 chr13 46471253 46471551 -73812761 - L1MC1 LINE L1 -552 5781 5467 8 939 2875 36 0 3 chr13 46471562 46471900 -73812412 - IAPLTR1a_Mm LTR ERVK 0 337 1 8 939 56261 21 20 7 chr13 46471900 46478291 -73806021 - IAPEz-int LTR ERVK 0 6481 8 8 939 2878 36 0 3 chr13 46478291 46478629 -73805683 - IAPLTR1a_Mm LTR ERVK 0 337 1 8 939 1040 254 91 30 chr13 46478655 46479061 -73805251 - L1MC1 LINE L1 -1306 4840 4410 8 939 223 68 67 22 chr13 46479066 46479111 -73805201 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 8 939 366 175 0 0 chr13 46479989 46480103 -73804209 + (CA)n Simple_repeat Simple_repeat 2 115 0 8 939 366 19 19 19 chr13 46480103 46480156 -73804156 + HAL1-3A_ME LINE L1 1976 2028 -830 8 939 1076 81 0 6 chr13 46480177 46480352 -73803960 + (CA)n Simple_repeat Simple_repeat 1 174 0 8 939 180 0 0 0 chr13 46480656 46480676 -73803636 + (TTG)n Simple_repeat Simple_repeat 2 21 0 8 939 237 226 0 0 chr13 46481041 46481094 -73803218 + (TTG)n Simple_repeat Simple_repeat 2 54 0 8 939 657 40 40 10 chr13 46482353 46482453 -73801859 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 8 939 180 0 0 0 chr13 46483068 46483088 -73801224 + (A)n Simple_repeat Simple_repeat 1 20 0 8 939 855 285 80 17 chr13 46483321 46483610 -73800702 + ORR1E LTR MaLR 33 339 -20 8 939 228 67 0 0 chr13 46484843 46484873 -73799439 + (TC)n Simple_repeat Simple_repeat 1 30 0 8 939 497 232 12 12 chr13 46484874 46485044 -73799268 + (TATATG)n Simple_repeat Simple_repeat 1 170 0 8 939 687 201 21 7 chr13 46485030 46485461 -73798851 + (TG)n Simple_repeat Simple_repeat 1 436 0 8 939 1062 233 81 4 chr13 46485461 46485732 -73798580 - B4A SINE B4 0 292 1 8 939 421 268 50 39 chr13 46486037 46486216 -73798096 - L1M4 LINE L1 -1035 5609 5429 8 939 469 301 90 28 chr13 46486222 46486434 -73797878 - MT2A LTR ERVL -5 528 304 8 939 550 246 15 0 chr13 46486574 46486704 -73797608 - MTEa LTR MaLR -247 132 1 8 939 1524 279 34 16 chr13 46486845 46487352 -73796960 - L1MA9 LINE L1 0 6312 5797 8 939 316 274 66 0 chr13 46487429 46487535 -73796777 - L1M3a LINE L1 -5841 114 2 8 939 324 341 87 37 chr13 46487545 46487843 -73796469 - L1M4 LINE L1 -1400 5244 4932 8 939 250 324 68 94 chr13 46488169 46488335 -73795977 - L1M4 LINE L1 -5081 1461 1297 8 939 581 146 19 19 chr13 46488335 46488440 -73795872 + PB1D9 SINE Alu 2 106 -14 9 939 250 324 68 94 chr13 46488440 46488836 -73795476 - L1M4 LINE L1 -5246 1296 913 8 939 2620 141 72 26 chr13 46488836 46489338 -73794974 - RLTR11A2 LTR ERVK -2 525 1 9 939 250 324 68 94 chr13 46489338 46489378 -73794934 - L1M4 LINE L1 -5630 912 874 8 939 2115 157 32 8 chr13 46489737 46490109 -73794203 - ORR1C2 LTR MaLR 0 384 4 9 939 487 303 101 38 chr13 46490219 46490507 -73793805 - L1M4 LINE L1 -5701 841 536 8 939 978 258 31 24 chr13 46490569 46490863 -73793449 + MLT1A0 LTR MaLR 67 362 -3 9 939 607 311 97 72 chr13 46490871 46491346 -73792966 - L1M4 LINE L1 -6040 502 16 8 939 319 179 42 56 chr13 46492437 46492508 -73791804 + RSINE1 SINE B4 36 105 -60 9 939 513 0 0 0 chr13 46492516 46492573 -73791739 + (TC)n Simple_repeat Simple_repeat 1 57 0 9 939 288 0 0 0 chr13 46492573 46492604 -73791708 + (CA)n Simple_repeat Simple_repeat 1 32 0 9 939 712 294 65 11 chr13 46492680 46492955 -73791357 + ORR1E LTR MaLR 1 290 -69 9 939 674 253 34 6 chr13 46494019 46494194 -73790118 + B3A SINE B2 1 180 -18 9 939 180 111 0 0 chr13 46494917 46494944 -73789368 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 9 939 18370 140 158 6 chr13 46495426 46496140 -73788172 + Lx2B LINE L1 1944 2648 -3238 9 939 476 77 13 0 chr13 46496140 46496218 -73788094 + (TA)n Simple_repeat Simple_repeat 1 79 0 9 939 18370 142 122 8 chr13 46496218 46500000 -73784312 + Lx2B LINE L1 2649 6982 -18 9 939 268 241 82 14 chr13 46500046 46500193 -73784119 + L1MEf LINE L1 872 1028 -5172 1 939 2406 130 5 3 chr13 46500476 46500861 -73783451 + ORR1B1 LTR MaLR 1 386 -8 2 939 977 171 193 0 chr13 46501515 46501696 -73782616 + B3 SINE B2 1 216 0 3 939 636 248 35 7 chr13 46501760 46501902 -73782410 + B1_Mur1 SINE Alu 1 146 -3 4 939 792 138 0 0 chr13 46502240 46502370 -73781942 + (GGAA)n Simple_repeat Simple_repeat 4 133 0 5 939 593 230 7 22 chr13 46502646 46502784 -73781528 - B1F SINE Alu 0 149 14 6 939 421 261 20 53 chr13 46502651 46502801 -73781511 - ID_B1 SINE B4 -2 222 78 7 939 887 218 43 0 chr13 46503225 46503436 -73780876 - MTD LTR MaLR -14 405 186 8 939 915 174 5 35 chr13 46503810 46504007 -73780305 - MTD LTR MaLR -228 191 1 8 939 772 251 47 0 chr13 46504238 46504429 -73779883 - ID_B1 SINE B4 -8 216 17 9 939 1107 36 0 42 chr13 46504860 46505004 -73779308 + B1_Mus1 SINE Alu 1 138 -10 1 939 243 0 0 0 chr13 46505004 46505031 -73779281 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 939 306 327 67 67 chr13 46505324 46505385 -73778927 + L1MEf LINE L1 715 774 -5320 1 939 189 107 0 0 chr13 46505385 46505413 -73778899 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 939 336 331 70 60 chr13 46505413 46505801 -73778511 + L1MEf LINE L1 775 1164 -5036 1 939 228 316 67 17 chr13 46505831 46505950 -73778362 + ORR1E LTR MaLR 5 129 -230 1 939 487 277 116 24 chr13 46506118 46506325 -73777987 + MTE-int LTR MaLR 3 228 -1352 1 939 216 0 0 0 chr13 46506433 46506457 -73777855 + (GGA)n Simple_repeat Simple_repeat 2 25 0 1 939 319 372 53 36 chr13 46506541 46506898 -73777414 + ERVL-E-int LTR ERVL 2808 3170 -2497 1 939 30 27 0 0 chr13 46507286 46507323 -73776989 + AT_rich Low_complexity Low_complexity 1 37 0 1 939 201 74 0 0 chr13 46507760 46507787 -73776525 + (A)n Simple_repeat Simple_repeat 1 27 0 1 939 395 193 48 0 chr13 46507880 46507963 -73776349 + ID_B1 SINE B4 138 224 0 2 939 600 80 20 10 chr13 46507985 46508086 -73776226 + (GGAA)n Simple_repeat Simple_repeat 3 104 0 2 939 220 196 319 21 chr13 46509992 46510086 -73774226 - B1_Mur1 SINE Alu 0 149 28 2 939 461 289 103 26 chr13 46510006 46510201 -73774111 - B4 SINE B4 -82 210 1 2 939 261 321 34 68 chr13 46511257 46511278 -73773034 - B4 SINE B4 -149 143 122 2 939 429 20 0 0 chr13 46511278 46511328 -73772984 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 939 327 306 39 29 chr13 46511328 46511453 -73772859 - B4A SINE B4 -171 121 2 2 939 735 130 7 48 chr13 46511941 46512086 -73772226 + URR1B DNA MER1_type 59 197 -28 2 939 804 247 5 36 chr13 46512524 46512747 -73771565 + ID_B1 SINE B4 1 216 -8 2 939 25 0 0 0 chr13 46513731 46513756 -73770556 + GC_rich Low_complexity Low_complexity 1 25 0 2 939 27 0 0 0 chr13 46514073 46514100 -73770212 + AT_rich Low_complexity Low_complexity 1 27 0 2 939 44 56 0 0 chr13 46514250 46514322 -73769990 + GC_rich Low_complexity Low_complexity 1 72 0 3 939 396 0 0 0 chr13 46514973 46515017 -73769295 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 939 594 28 0 0 chr13 46515045 46515117 -73769195 + (CA)n Simple_repeat Simple_repeat 2 73 0 3 939 386 38 0 19 chr13 46515778 46515831 -73768481 + (CCCCCT)n Simple_repeat Simple_repeat 3 54 0 3 939 22 0 0 0 chr13 46516383 46516405 -73767907 + AT_rich Low_complexity Low_complexity 1 22 0 3 939 219 220 0 0 chr13 46516841 46516891 -73767421 + CT-rich Low_complexity Low_complexity 2 51 0 3 939 206 95 24 0 chr13 46517506 46517548 -73766764 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 3 939 24 0 0 0 chr13 46517792 46517816 -73766496 + AT_rich Low_complexity Low_complexity 1 24 0 3 939 270 233 0 16 chr13 46518888 46518949 -73765363 + CT-rich Low_complexity Low_complexity 1 60 0 3 939 462 49 0 0 chr13 46520873 46520934 -73763378 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 3 939 253 220 34 0 chr13 46520943 46521002 -73763310 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 939 325 253 152 0 chr13 46521181 46521273 -73763039 + PB1D10 SINE Alu 1 103 -14 4 939 249 57 0 0 chr13 46521273 46521308 -73763004 + (GGAA)n Simple_repeat Simple_repeat 2 36 0 4 939 225 170 43 0 chr13 46521471 46521518 -73762794 + (TA)n Simple_repeat Simple_repeat 2 50 0 4 939 524 121 11 0 chr13 46522693 46522784 -73761528 + (GA)n Simple_repeat Simple_repeat 1 92 0 4 939 22 0 0 0 chr13 46523705 46523727 -73760585 + AT_rich Low_complexity Low_complexity 1 22 0 4 939 212 143 0 0 chr13 46524456 46524491 -73759821 + (CCG)n Simple_repeat Simple_repeat 2 36 0 4 939 206 308 0 0 chr13 46524573 46524638 -73759674 + (CCG)n Simple_repeat Simple_repeat 2 66 0 4 939 210 158 0 0 chr13 46524599 46524637 -73759675 + (CTG)n Simple_repeat Simple_repeat 3 40 0 4 939 22 0 0 0 chr13 46526442 46526464 -73757848 + AT_rich Low_complexity Low_complexity 1 22 0 4 939 305 262 61 61 chr13 46526504 46526618 -73757694 - PB1D10 SINE Alu -1 116 3 5 939 525 217 250 0 chr13 46526618 46526672 -73757640 - ID_B1 SINE B4 -132 92 1 5 939 373 218 13 13 chr13 46527007 46527086 -73757226 - ID2 SINE ID -4 79 1 5 939 496 290 40 51 chr13 46527087 46527263 -73757049 - ID_B1 SINE B4 -7 217 51 5 939 231 297 99 0 chr13 46527275 46527366 -73756946 - B1F1 SINE Alu -13 136 37 5 939 210 128 0 0 chr13 46528187 46528226 -73756086 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 939 249 225 24 24 chr13 46528803 46528885 -73755427 + MLT1A1 LTR MaLR 323 404 -4 5 939 781 264 19 19 chr13 46529014 46529230 -73755082 - ID_B1 SINE B4 -7 217 2 5 939 311 171 0 28 chr13 46529406 46529478 -73754834 + GA-rich Low_complexity Low_complexity 4 73 0 5 939 186 43 0 0 chr13 46529683 46529706 -73754606 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 5 117 1067 279 110 85 chr13 46529904 46530695 -73753617 - L1MA6 LINE L1 -3 6297 5487 6 940 261 316 40 0 chr13 46530704 46530780 -73753532 - ID4_ SINE ID -4 79 1 6 940 542 86 12 0 chr13 46530793 46530874 -73753438 + (TC)n Simple_repeat Simple_repeat 1 82 0 6 940 432 186 35 0 chr13 46530887 46530973 -73753339 - L1MA6 LINE L1 -836 5461 5373 6 940 216 0 0 0 chr13 46531035 46531059 -73753253 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 940 378 267 0 43 chr13 46531069 46531163 -73753149 - RSINE1 SINE B4 -21 144 55 6 940 960 218 10 24 chr13 46531911 46532118 -73752194 - B3 SINE B2 -7 209 6 6 940 582 264 111 21 chr13 46532169 46532359 -73751953 + ID_B1 SINE B4 1 207 -17 6 940 278 218 0 0 chr13 46532700 46532755 -73751557 - B4 SINE B4 -4 288 234 6 940 587 179 7 20 chr13 46532759 46532907 -73751405 + C-rich Low_complexity Low_complexity 3 148 0 6 940 601 227 14 33 chr13 46532921 46533091 -73751221 - B4 SINE B4 -46 246 80 6 940 1119 277 99 0 chr13 46533120 46533514 -73750798 + RCHARR1 DNA MER1_type 65 497 -477 6 940 698 218 7 0 chr13 46533515 46533657 -73750655 + B1_Mur1 SINE Alu 1 143 -6 7 940 594 198 0 0 chr13 46533795 46533962 -73750350 + (CA)n Simple_repeat Simple_repeat 2 168 0 7 940 1679 262 26 4 chr13 46533962 46534422 -73749890 + RCHARR1 DNA MER1_type 490 959 -15 6 940 1056 265 53 41 chr13 46534550 46534989 -73749323 - L1MA8 LINE L1 -303 5988 5546 7 940 3506 23 2 0 chr13 46535399 46535794 -73748518 + MTA_Mm LTR MaLR 1 396 0 7 940 9117 41 4 1 chr13 46535794 46536889 -73747423 + MTA_Mm-int LTR MaLR 1 1098 0 7 940 3506 23 2 0 chr13 46536889 46537284 -73747028 + MTA_Mm LTR MaLR 1 396 0 7 940 274 202 49 132 chr13 46537447 46537679 -73746633 + MTEb LTR MaLR 117 354 -25 7 940 766 245 92 59 chr13 46538907 46539180 -73745132 + B4 SINE B4 5 286 -6 7 940 436 290 0 0 chr13 46540463 46540563 -73743749 + PB1D10 SINE Alu 11 110 -7 7 940 785 154 0 7 chr13 46540577 46540721 -73743591 + GA-rich Low_complexity Low_complexity 4 146 0 7 940 598 47 23 0 chr13 46541774 46541860 -73742452 + (TA)n Simple_repeat Simple_repeat 2 89 0 7 940 786 301 34 54 chr13 46542322 46542620 -73741692 - B4A SINE B4 0 292 1 7 940 198 346 39 29 chr13 46542662 46542766 -73741546 - L2c LINE L2 -11 3376 3272 8 940 702 243 26 108 chr13 46543220 46543488 -73740824 + MTE2a LTR MaLR 120 365 -14 8 940 291 277 49 82 chr13 46544165 46544287 -73740025 + MLT1I LTR MaLR 254 371 -40 8 940 498 292 22 0 chr13 46544488 46544625 -73739687 + MLT1A0 LTR MaLR 226 365 0 8 940 567 0 0 0 chr13 46544758 46544821 -73739491 + (GA)n Simple_repeat Simple_repeat 1 63 0 8 940 844 278 14 5 chr13 46544918 46545128 -73739184 + ID_B1 SINE B4 4 215 -9 8 940 274 216 0 51 chr13 46545186 46545264 -73739048 + GA-rich Low_complexity Low_complexity 3 76 0 8 940 22 0 0 0 chr13 46545619 46545641 -73738671 + AT_rich Low_complexity Low_complexity 1 22 0 8 940 753 288 73 1 chr13 46545709 46546040 -73738272 - MTD LTR MaLR 0 419 33 8 940 268 181 97 8 chr13 46546948 46547082 -73737230 + (CACCT)n Simple_repeat Simple_repeat 1 146 0 8 940 1408 167 162 44 chr13 46547110 46547291 -73737021 + RMER17C LTR ERVK 4 187 -223 9 940 656 77 10 0 chr13 46547291 46547395 -73736917 + (TC)n Simple_repeat Simple_repeat 2 106 0 9 940 1408 167 162 44 chr13 46547395 46547577 -73736735 + RMER17C LTR ERVK 188 410 0 9 940 254 265 0 108 chr13 46548318 46548411 -73735901 + MLT1A LTR MaLR 35 117 -257 9 940 1007 230 66 159 chr13 46548703 46549111 -73735201 - ORR1D2 LTR MaLR 0 370 1 9 940 7377 54 0 0 chr13 46549292 46550181 -73734131 - L1Md_T LINE L1 0 6582 5694 9 940 602 300 106 62 chr13 46550897 46551302 -73733010 - L1ME2z LINE L1 -505 5939 5517 9 940 594 235 0 0 chr13 46551673 46551792 -73732520 + B3A SINE B2 33 151 -47 9 940 483 18 0 0 chr13 46551793 46551849 -73732463 + (CA)n Simple_repeat Simple_repeat 1 56 0 9 940 259 277 84 0 chr13 46551992 46552111 -73732201 - Lx8 LINE L1 0 7473 7345 9 940 219 320 29 10 chr13 46552251 46552355 -73731957 + L2b LINE L2 3270 3375 0 9 940 486 225 63 0 chr13 46552447 46552558 -73731754 - PB1D7 SINE Alu -2 118 1 1 940 1080 219 119 0 chr13 46552602 46552862 -73731450 - Lx8 LINE L1 -609 6864 6574 9 940 1023 148 65 11 chr13 46553142 46553326 -73730986 + RMER16-int LTR ERVK 1 194 -5212 1 940 1569 93 0 0 chr13 46553323 46553537 -73730775 + RMER16-int LTR ERVK 989 1202 -4204 1 940 3273 29 37 3 chr13 46554074 46554457 -73729855 + MTA_Mm LTR MaLR 1 396 0 1 940 627 295 58 5 chr13 46555957 46556165 -73728147 + B4A SINE B4 1 219 -73 1 940 435 336 56 13 chr13 46557202 46557434 -73726878 - MER2 DNA MER2_type -10 335 94 1 940 450 0 0 0 chr13 46557560 46557610 -73726702 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 940 1987 276 84 71 chr13 46557645 46558583 -73725729 + RCHARR1 DNA MER1_type 9 958 -16 1 940 335 192 55 0 chr13 46559052 46559125 -73725187 + ID4_ SINE ID 2 78 -5 1 940 494 234 40 54 chr13 46559558 46559707 -73724605 + RSINE1 SINE B4 5 151 -14 1 940 303 28 0 0 chr13 46559710 46559746 -73724566 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 940 348 150 0 0 chr13 46559746 46559826 -73724486 + (GA)n Simple_repeat Simple_repeat 1 80 0 1 940 200 224 20 20 chr13 46560237 46560337 -73723975 + CT-rich Low_complexity Low_complexity 1 100 0 1 940 21 0 0 0 chr13 46561074 46561095 -73723217 + AT_rich Low_complexity Low_complexity 1 21 0 1 940 221 0 0 33 chr13 46561714 46561744 -73722568 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1 940 273 128 0 0 chr13 46561745 46561792 -73722520 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 940 476 257 35 139 chr13 46561805 46561977 -73722335 - B3A SINE B2 -44 154 1 1 940 942 292 83 19 chr13 46562422 46562796 -73721516 - MTD LTR MaLR -15 404 7 1 940 201 154 0 0 chr13 46563372 46563411 -73720901 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1 940 371 258 85 46 chr13 46563682 46563812 -73720500 + B4 SINE B4 151 285 -7 1 940 265 0 0 70 chr13 46564527 46564570 -73719742 + (TGGGGG)n Simple_repeat Simple_repeat 2 41 0 1 940 1034 248 45 11 chr13 46564784 46565054 -73719258 - MTEa LTR MaLR -111 268 2 1 940 547 299 66 28 chr13 46565405 46565725 -73718587 + LTR37A LTR ERV1 18 349 -77 1 940 2848 89 41 3 chr13 46565813 46566205 -73718107 - MTB_Mm LTR MaLR 0 407 1 1 940 6387 129 89 32 chr13 46566205 46567394 -73716918 - MTB_Mm-int LTR MaLR 0 1258 2 1 940 3287 48 25 2 chr13 46567394 46567790 -73716522 - MTB_Mm LTR MaLR 0 407 2 1 940 1278 171 0 43 chr13 46568478 46568710 -73715602 - URR1B DNA MER1_type -1 224 3 1 940 190 331 151 48 chr13 46569349 46569660 -73714652 + L3 LINE CR1 3498 3840 -649 1 940 764 234 108 11 chr13 46569948 46570134 -73714178 - Lx8 LINE L1 -707 6766 6563 1 940 236 111 0 0 chr13 46570692 46570728 -73713584 - tRNA-Leu-TTG tRNA tRNA -50 36 1 1 940 391 257 63 9 chr13 46570903 46571008 -73713304 - PB1D10 SINE Alu -1 116 10 1 940 592 344 65 65 chr13 46571820 46572355 -73711957 - MLT2B3 LTR ERVL 0 554 20 1 940 583 306 86 41 chr13 46572556 46573383 -73710929 - L1M4 LINE L1 -520 5664 4794 1 940 309 326 85 0 chr13 46573395 46573524 -73710788 + MER58A DNA MER1_type 16 155 -69 1 940 786 264 47 62 chr13 46573582 46573921 -73710391 - MTEa LTR MaLR -41 338 5 1 940 476 308 119 21 chr13 46573932 46574409 -73709903 - L1M4 LINE L1 -1344 4802 4273 1 940 3013 83 5 0 chr13 46574708 46575104 -73709208 - MTB LTR MaLR 0 400 3 1 940 741 387 49 15 chr13 46575591 46576182 -73708130 - Arthur1 DNA Tip100 -3171 776 163 1 940 228 211 33 50 chr13 46576716 46576776 -73707536 + MER33 DNA MER1_type 22 80 -244 1 940 222 203 159 0 chr13 46576770 46576839 -73707473 + RSINE1 SINE B4 11 90 -75 1 940 340 254 28 23 chr13 46577366 46577543 -73706769 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 940 2565 296 98 63 chr13 46577602 46579723 -73704589 + L1M2 LINE L1 3164 5302 -841 1 940 216 0 0 0 chr13 46579723 46579747 -73704565 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 940 716 312 121 97 chr13 46579747 46579951 -73704361 + L1M2 LINE L1 5290 5545 -302 1 940 808 274 54 15 chr13 46579961 46580220 -73704092 + B4 SINE B4 5 273 -19 1 940 183 204 0 0 chr13 46580261 46580305 -73704007 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 940 490 283 83 8 chr13 46580308 46580578 -73703734 + L1MA4 LINE L1 5595 5900 -400 1 940 362 182 56 11 chr13 46580579 46580668 -73703644 + L1MB3 LINE L1 5819 5911 -272 1 940 1236 34 0 0 chr13 46580898 46581047 -73703265 + (GAAA)n Simple_repeat Simple_repeat 4 152 0 1 940 22 35 0 0 chr13 46581276 46581305 -73703007 + AT_rich Low_complexity Low_complexity 1 29 0 1 940 514 146 65 3 chr13 46581409 46581722 -73702590 + (TG)n Simple_repeat Simple_repeat 1 332 0 1 940 260 296 242 0 chr13 46581730 46581862 -73702450 - RSINE1 SINE B4 0 165 2 1 940 1028 198 69 19 chr13 46581873 46582089 -73702223 + B4A SINE B4 65 291 -1 1 940 1009 292 39 50 chr13 46582251 46582633 -73701679 - MTEa LTR MaLR -1 378 1 1 940 372 300 0 8 chr13 46582633 46582754 -73701558 - L1MB7 LINE L1 -158 6026 5907 1 940 890 264 153 46 chr13 46582932 46583298 -73701014 + MTD LTR MaLR 1 405 -14 1 940 249 83 0 0 chr13 46583809 46583845 -73700467 + (TGGG)n Simple_repeat Simple_repeat 1 36 0 1 940 776 247 147 46 chr13 46584226 46584447 -73699865 - B4A SINE B4 -2 290 39 1 940 2275 116 3 12 chr13 46584447 46584779 -73699533 - ORR1A4 LTR MaLR 0 329 1 1 940 776 247 147 46 chr13 46584779 46584816 -73699496 - B4A SINE B4 -254 38 6 1 940 446 260 0 28 chr13 46584819 46584926 -73699386 + ID_B1 SINE B4 105 208 -16 1 940 940 97 48 16 chr13 46585317 46585570 -73698742 + (TAGA)n Simple_repeat Simple_repeat 1 261 0 1 940 322 314 42 65 chr13 46585575 46585765 -73698547 - L1MA6 LINE L1 -72 6228 6034 1 940 529 233 0 8 chr13 46585765 46585882 -73698430 - PB1D10 SINE Alu -1 116 1 1 940 322 314 42 65 chr13 46585882 46586001 -73698311 - L1MA6 LINE L1 -267 6033 5926 1 940 236 305 197 8 chr13 46586937 46587069 -73697243 + Charlie12 DNA MER1_type 5 161 -2712 1 940 2111 106 0 16 chr13 46587431 46587748 -73696564 - Lx2 LINE L1 0 6997 6686 1 940 875 267 10 5 chr13 46587748 46587951 -73696361 - B3 SINE B2 -11 205 2 1 940 743 292 30 78 chr13 46588078 46588449 -73695863 - ORR1E LTR MaLR -6 353 1 1 940 483 266 35 81 chr13 46588798 46588970 -73695342 - RSINE1 SINE B4 -1 164 1 1 940 2411 122 47 3 chr13 46588990 46589352 -73694960 - ORR1C1 LTR MaLR 0 378 1 1 940 389 275 0 0 chr13 46589987 46590096 -73694216 + PB1D10 SINE Alu 1 109 -8 1 940 336 48 0 0 chr13 46590132 46590174 -73694138 + (CAGA)n Simple_repeat Simple_repeat 3 44 0 1 940 288 305 44 66 chr13 46590186 46590414 -73693898 + L1MA4 LINE L1 6018 6240 -60 1 940 278 333 0 8 chr13 46590460 46590581 -73693731 - PB1D9 SINE Alu 0 120 1 1 940 441 0 0 0 chr13 46591108 46591157 -73693155 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 940 465 115 0 0 chr13 46591157 46591234 -73693078 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 940 1835 152 51 43 chr13 46591541 46591745 -73692567 - ORR1D1 LTR MaLR 0 374 165 1 940 474 18 0 0 chr13 46591745 46591800 -73692512 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 940 1835 152 51 43 chr13 46591800 46591965 -73692347 - ORR1D1 LTR MaLR -210 164 2 1 940 445 278 148 19 chr13 46592018 46592234 -73692078 + MER2 DNA MER2_type 89 332 -13 1 940 477 121 0 0 chr13 46592300 46592383 -73691929 + (TG)n Simple_repeat Simple_repeat 1 83 0 1 940 907 152 6 11 chr13 46592429 46592608 -73691704 + CT-rich Low_complexity Low_complexity 2 179 0 1 940 1033 240 9 5 chr13 46592643 46592865 -73691447 - B4 SINE B4 -68 224 2 1 940 325 306 160 8 chr13 46592978 46593196 -73691116 + MIR SINE MIR 8 253 -15 1 940 388 313 122 12 chr13 46593254 46593500 -73690812 - MER2 DNA MER2_type -64 281 9 1 940 401 375 27 27 chr13 46594296 46594444 -73689868 + RSINE1 SINE B4 15 162 -3 1 940 304 311 83 24 chr13 46594524 46594736 -73689576 + MLT1A0 LTR MaLR 181 389 -19 1 940 414 0 0 0 chr13 46594813 46594859 -73689453 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 940 441 0 0 0 chr13 46594859 46594907 -73689405 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 940 946 285 32 14 chr13 46594911 46595192 -73689120 - B4 SINE B4 0 292 7 1 940 419 214 214 0 chr13 46595644 46595756 -73688556 + B1F SINE Alu 6 141 -8 1 940 1549 187 21 18 chr13 46595927 46596253 -73688059 + ORR1B2 LTR MaLR 1 327 -40 1 940 1175 48 0 20 chr13 46596253 46596403 -73687909 + B1_Mus1 SINE Alu 2 148 0 1 940 453 169 0 0 chr13 46596408 46596491 -73687821 + A-rich Low_complexity Low_complexity 1 83 0 1 940 306 106 0 0 chr13 46596491 46596538 -73687774 + ORR1A3 LTR MaLR 272 318 -8 1 940 687 199 13 20 chr13 46596616 46596765 -73687547 + B1_Mur2 SINE Alu 2 149 0 1 940 203 233 0 0 chr13 46597595 46597638 -73686674 + G-rich Low_complexity Low_complexity 1 43 0 1 940 336 102 0 0 chr13 46598461 46598510 -73685802 + (A)n Simple_repeat Simple_repeat 1 49 0 1 940 322 232 98 28 chr13 46598570 46598679 -73685633 - PB1D7 SINE Alu -2 118 4 1 940 509 246 45 0 chr13 46598679 46598808 -73685504 - B1F SINE Alu -13 136 2 1 940 316 337 63 0 chr13 46599265 46599455 -73684857 - MER58B DNA MER1_type -2 339 138 1 940 355 245 14 0 chr13 46599478 46599625 -73684687 + (CA)n Simple_repeat Simple_repeat 1 149 0 1 940 243 0 0 0 chr13 46600052 46600079 -73684233 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 940 1130 50 35 0 chr13 46600234 46600375 -73683937 + B1_Mm SINE Alu 2 147 0 1 940 443 34 682 0 chr13 46600408 46600496 -73683816 - B1_Mus1 SINE Alu 0 148 1 1 940 868 256 106 16 chr13 46600497 46600751 -73683561 + L1MB8 LINE L1 5391 5667 -511 1 940 242 329 0 0 chr13 46600777 46600853 -73683459 + ID4 SINE ID 1 76 -7 1 940 250 232 120 63 chr13 46600904 46601039 -73683273 + L1MB8 LINE L1 5665 5832 -352 1 940 393 274 11 0 chr13 46601043 46601206 -73683106 + B4A SINE B4 29 282 -10 2 940 309 156 0 45 chr13 46601235 46601302 -73683010 + L1MB8 LINE L1 5851 5914 -264 1 940 859 149 28 0 chr13 46601419 46601560 -73682752 - B1_Mur3 SINE Alu -4 145 1 2 940 26 50 0 0 chr13 46601567 46601607 -73682705 + AT_rich Low_complexity Low_complexity 1 40 0 2 940 617 219 78 48 chr13 46601658 46601864 -73682448 - Lx8 LINE L1 -232 7241 7030 2 940 520 265 0 15 chr13 46602214 46602348 -73681964 - ID_B1 SINE B4 -1 223 92 2 940 195 100 0 0 chr13 46602562 46602592 -73681720 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 940 1098 258 13 169 chr13 46602612 46603149 -73681163 - RLTR11B LTR ERVK 0 453 1 2 940 578 310 106 66 chr13 46603155 46603428 -73680884 - B4 SINE B4 -6 286 3 2 940 450 0 0 0 chr13 46603796 46603846 -73680466 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 940 215 31 31 0 chr13 46604153 46604185 -73680127 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 940 864 293 71 10 chr13 46604591 46604888 -73679424 - MTEa LTR MaLR -23 356 42 2 940 245 226 42 31 chr13 46605018 46605114 -73679198 + MLT1A0 LTR MaLR 15 111 -254 2 940 292 262 0 36 chr13 46605310 46605421 -73678891 - MLT1A1 LTR MaLR -2 406 300 2 940 327 328 60 45 chr13 46605826 46606027 -73678285 + Charlie2a DNA MER1_type 2 205 -2656 2 940 522 283 35 21 chr13 46606233 46606374 -73677938 + RSINE1 SINE B4 8 150 -15 2 940 320 250 161 71 chr13 46606931 46607185 -73677127 + Charlie2a DNA MER1_type 2046 2322 -539 2 940 915 186 90 0 chr13 46607494 46607682 -73676630 - B3 SINE B2 -5 211 7 2 940 303 332 25 65 chr13 46607696 46607896 -73676416 + Charlie2a DNA MER1_type 2438 2629 -232 2 940 1317 74 3 0 chr13 46608055 46608409 -73675903 + (TTCC)n Simple_repeat Simple_repeat 1 355 0 2 940 225 0 0 0 chr13 46608471 46608496 -73675816 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 940 368 256 55 83 chr13 46608576 46608596 -73675716 - ID_B1 SINE B4 0 224 84 2 940 507 248 8 32 chr13 46608596 46608721 -73675591 - B1F SINE Alu -25 124 3 2 940 1163 287 130 101 chr13 46608725 46608963 -73675349 - L1MEf LINE L1 -5045 1155 898 2 940 222 37 0 0 chr13 46608963 46608990 -73675322 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 940 1163 287 130 101 chr13 46608990 46609674 -73674638 - L1MEf LINE L1 -5303 897 206 2 940 629 226 140 119 chr13 46611423 46611615 -73672697 + B4 SINE B4 1 219 -73 2 940 706 232 87 70 chr13 46611615 46611902 -73672410 + B4A SINE B4 1 292 0 2 940 652 226 140 119 chr13 46611902 46611995 -73672317 + B4 SINE B4 220 292 0 2 940 776 152 0 33 chr13 46612012 46612196 -73672116 + (CA)n Simple_repeat Simple_repeat 2 179 0 2 940 195 42 0 0 chr13 46612447 46612471 -73671841 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2 940 516 172 0 53 chr13 46613169 46613359 -73670953 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 940 861 268 99 65 chr13 46613395 46613658 -73670654 - B4 SINE B4 -20 272 1 2 940 1052 234 9 14 chr13 46613806 46614023 -73670289 + B3 SINE B2 1 216 0 2 940 470 225 11 0 chr13 46614052 46614141 -73670171 + 5S rRNA rRNA 1 90 -31 2 940 24 0 0 0 chr13 46614170 46614194 -73670118 + AT_rich Low_complexity Low_complexity 1 24 0 2 940 1134 225 170 9 chr13 46614737 46615060 -73669252 - MTEa LTR MaLR -4 375 1 2 940 24 0 0 0 chr13 46615600 46615624 -73668688 + AT_rich Low_complexity Low_complexity 1 24 0 2 940 499 227 36 9 chr13 46615873 46615984 -73668328 + PB1D10 SINE Alu 3 116 -1 2 940 250 269 30 0 chr13 46615986 46616053 -73668259 + GA-rich Low_complexity Low_complexity 2 70 0 2 940 250 161 0 111 chr13 46616191 46616254 -73668058 + B4A SINE B4 90 145 -147 2 940 442 248 36 18 chr13 46616209 46616320 -73667992 + B1F SINE Alu 18 130 -19 2 940 311 328 29 100 chr13 46616338 46616548 -73667764 + HAL1 LINE L1 2263 2457 -50 2 940 538 345 56 14 chr13 46616727 46617134 -73667178 + L1MA5 LINE L1 5728 6152 -148 2 940 551 40 0 13 chr13 46617134 46617209 -73667103 + (CA)n Simple_repeat Simple_repeat 2 75 0 2 940 491 352 86 13 chr13 46617209 46617267 -73667045 + L1MA5 LINE L1 6153 6226 -74 2 940 347 283 104 0 chr13 46617489 46617595 -73666717 + ID_B1 SINE B4 86 202 -22 2 940 325 282 0 0 chr13 46617567 46617638 -73666674 + B1_Mur1 SINE Alu 68 138 -11 2 940 1065 244 0 0 chr13 46617703 46617900 -73666412 + B3 SINE B2 1 197 -19 2 940 21 0 0 0 chr13 46617905 46617926 -73666386 + AT_rich Low_complexity Low_complexity 1 21 0 2 940 277 296 6 147 chr13 46620394 46620443 -73663869 + MT2B2 LTR ERVL 119 143 -441 2 940 801 199 0 60 chr13 46620443 46620593 -73663719 + B1_Mur2 SINE Alu 3 143 -6 2 940 322 338 7 62 chr13 46620464 46620609 -73663703 + B4A SINE B4 100 236 -56 2 940 556 235 5 124 chr13 46621518 46621703 -73662609 + RSINE1 SINE B4 3 165 0 2 940 296 281 134 10 chr13 46621783 46621880 -73662432 + PB1D7 SINE Alu 1 109 -11 2 940 195 173 0 0 chr13 46621887 46621939 -73662373 + T-rich Low_complexity Low_complexity 1 52 0 2 940 2312 137 21 26 chr13 46621939 46622321 -73661991 - ORR1B1 LTR MaLR -14 380 1 2 940 236 196 123 18 chr13 46622321 46622370 -73661942 + ID_B1 SINE B4 170 224 0 2 940 1066 118 11 6 chr13 46622408 46622587 -73661725 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 2 940 593 0 0 27 chr13 46622587 46622660 -73661652 + (GAAAA)n Simple_repeat Simple_repeat 3 74 0 2 940 242 265 79 71 chr13 46622723 46622849 -73661463 - MER53 DNA hAT -40 153 27 2 940 364 291 84 51 chr13 46623453 46623698 -73660614 + B4A SINE B4 2 292 0 2 940 312 247 2 0 chr13 46624052 46624119 -73660193 + B1F1 SINE Alu 1 68 -81 2 940 246 62 0 0 chr13 46624381 46624413 -73659899 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2 940 716 290 38 73 chr13 46625650 46625966 -73658346 - MTEa LTR MaLR -1 378 74 2 940 273 251 20 3 chr13 46626044 46626112 -73658200 - MTEa LTR MaLR -308 71 3 2 940 364 153 27 40 chr13 46626806 46626881 -73657431 + RLTR11A LTR ERVK 7 80 -448 2 940 347 319 285 21 chr13 46627176 46627716 -73656596 + L1MB2 LINE L1 5452 6133 -38 2 940 908 266 47 36 chr13 46627781 46628058 -73656254 - B4 SINE B4 -11 281 2 2 940 210 91 0 0 chr13 46628325 46628358 -73655954 + (GA)n Simple_repeat Simple_repeat 2 34 0 2 940 191 167 14 43 chr13 46629394 46629463 -73654849 + GA-rich Low_complexity Low_complexity 2 68 0 2 940 455 267 131 96 chr13 46630327 46630382 -73653930 + ID SINE ID 4 65 -159 2 940 279 304 0 124 chr13 46630382 46630551 -73653761 + B1F2 SINE Alu 1 148 -1 2 940 591 260 30 8 chr13 46630894 46631026 -73653286 - ID_B1 SINE B4 -10 214 80 2 940 321 301 89 15 chr13 46631438 46631573 -73652739 - HAL1-3A_ME LINE L1 -432 2426 2282 2 940 885 129 12 6 chr13 46631643 46631815 -73652497 + (TC)n Simple_repeat Simple_repeat 2 174 0 2 940 735 304 29 42 chr13 46632456 46632696 -73651616 + MTEb LTR MaLR 105 341 -38 2 940 1710 158 80 26 chr13 46633021 46633410 -73650902 - RMER17C LTR ERVK 0 410 1 2 940 598 244 24 30 chr13 46633698 46633863 -73650449 + RSINE1 SINE B4 2 165 0 2 940 21 36 0 0 chr13 46633912 46633940 -73650372 + AT_rich Low_complexity Low_complexity 1 28 0 2 940 454 269 109 22 chr13 46634278 46634415 -73649897 - RSINE1 SINE B4 -13 152 4 2 940 652 289 104 61 chr13 46634587 46635132 -73649180 - L1MA4 LINE L1 -278 6019 5476 2 940 646 227 31 49 chr13 46635288 46635450 -73648862 - RSINE1 SINE B4 -4 161 3 2 940 304 226 0 0 chr13 46635795 46635857 -73648455 + PB1D10 SINE Alu 37 98 -19 2 940 297 0 0 0 chr13 46636063 46636096 -73648216 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 2 940 865 141 0 0 chr13 46636101 46636229 -73648083 - B1_Mus1 SINE Alu -18 130 3 2 940 504 0 0 0 chr13 46636877 46636933 -73647379 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 940 263 28 28 0 chr13 46636935 46636971 -73647341 + (GA)n Simple_repeat Simple_repeat 1 37 0 2 940 301 266 55 67 chr13 46637085 46637250 -73647062 + L1M1 LINE L1 5697 5859 -441 2 940 1401 88 0 15 chr13 46637545 46637741 -73646571 + B2_Mm2 SINE B2 3 195 0 2 940 801 168 8 0 chr13 46637742 46637873 -73646439 - B1_Mur4 SINE Alu -17 133 2 2 940 182 98 0 47 chr13 46638071 46638114 -73646198 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 2 940 625 272 23 106 chr13 46638139 46638357 -73645955 - ID_B1 SINE B4 0 224 25 2 940 269 282 9 104 chr13 46638898 46639013 -73645299 - MT2B LTR ERVL -304 297 194 2 940 473 296 0 0 chr13 46638936 46639044 -73645268 - PB1D7 SINE Alu -7 113 6 2 940 255 103 0 0 chr13 46639384 46639423 -73644889 + (GA)n Simple_repeat Simple_repeat 1 39 0 2 940 251 177 0 16 chr13 46639452 46639515 -73644797 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 940 203 156 0 0 chr13 46639842 46639874 -73644438 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 940 258 317 111 21 chr13 46640212 46640297 -73644015 + MER5C DNA MER1_type 70 158 -155 2 940 257 0 30 0 chr13 46640297 46640330 -73643982 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 940 258 317 111 21 chr13 46640330 46640434 -73643878 + MER5C DNA MER1_type 159 275 -38 2 940 24 0 0 0 chr13 46640593 46640617 -73643695 + GC_rich Low_complexity Low_complexity 1 24 0 2 940 249 271 0 0 chr13 46641241 46641300 -73643012 + CT-rich Low_complexity Low_complexity 3 61 0 2 940 678 223 28 0 chr13 46641322 46641483 -73642829 - B3 SINE B2 0 198 24 2 940 185 315 113 53 chr13 46641889 46642040 -73642272 - MIRb SINE MIR -7 261 102 2 940 978 279 7 58 chr13 46642228 46642536 -73641776 + B4 SINE B4 1 292 0 2 940 729 122 0 0 chr13 46642565 46642680 -73641632 + (GA)n Simple_repeat Simple_repeat 2 116 0 2 940 218 204 41 0 chr13 46642681 46642730 -73641582 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 2 940 366 231 0 119 chr13 46644665 46644783 -73639529 + MT2B LTR ERVL 154 257 -344 3 940 741 162 0 0 chr13 46644678 46644795 -73639517 + B1_Mur4 SINE Alu 1 117 -33 3 940 693 222 13 46 chr13 46645093 46645244 -73639068 + B1_Mur1 SINE Alu 3 148 -1 3 940 375 23 0 0 chr13 46645297 46645341 -73638971 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 940 410 244 19 39 chr13 46645406 46645556 -73638756 + B3A SINE B2 67 216 0 3 940 264 266 105 68 chr13 46646369 46646502 -73637810 + B1F SINE Alu 1 138 -11 3 940 414 218 52 52 chr13 46646402 46646518 -73637794 + ID_B1 SINE B4 109 224 0 3 940 639 81 0 0 chr13 46647341 46647440 -73636872 + (TG)n Simple_repeat Simple_repeat 2 100 0 3 940 505 216 0 15 chr13 46647442 46647578 -73636734 + CT-rich Low_complexity Low_complexity 6 139 0 3 940 940 141 0 21 chr13 46647902 46648047 -73636265 + B1_Mur1 SINE Alu 1 142 -7 3 940 1001 135 72 3 chr13 46648058 46648239 -73636073 + B2_Mm2 SINE B2 2 191 -2 3 940 728 82 0 8 chr13 46649117 46649240 -73635072 + (GTTTG)n Simple_repeat Simple_repeat 1 122 0 3 940 396 0 0 0 chr13 46650835 46650879 -73633433 + (TAA)n Simple_repeat Simple_repeat 2 45 0 3 940 267 331 39 23 chr13 46651418 46651548 -73632764 + MT2B LTR ERVL 155 286 -315 3 940 426 181 189 9 chr13 46651449 46651555 -73632757 + B1F SINE Alu 22 146 -3 3 940 746 267 124 80 chr13 46651945 46652283 -73632029 - ORR1E LTR MaLR -6 353 1 3 940 322 308 74 37 chr13 46652291 46652480 -73631832 + HAL1b LINE L1 150 345 -1664 3 940 1759 137 92 72 chr13 46652907 46653254 -73631058 + ORR1B1 LTR MaLR 41 394 0 3 940 234 325 106 24 chr13 46653647 46653817 -73630495 + HAL1b LINE L1 929 1112 -897 3 940 1005 236 24 68 chr13 46653919 46654214 -73630098 + B4A SINE B4 3 284 -8 3 940 392 68 55 0 chr13 46654228 46654301 -73630011 + (CA)n Simple_repeat Simple_repeat 1 77 0 3 940 26 64 0 0 chr13 46654394 46654441 -73629871 + AT_rich Low_complexity Low_complexity 1 47 0 3 940 335 268 0 9 chr13 46654806 46654919 -73629393 - L1MB8 LINE L1 -20 6164 6053 3 940 1301 215 18 39 chr13 46655004 46655262 -73629050 - B4 SINE B4 -13 279 17 3 940 222 62 0 0 chr13 46655262 46655294 -73629018 + (CACCC)n Simple_repeat Simple_repeat 5 36 0 3 940 1301 215 18 39 chr13 46655294 46655320 -73628992 - B4 SINE B4 -276 16 1 3 940 668 295 9 14 chr13 46655320 46655540 -73628772 - L1MB8 LINE L1 -139 6039 5821 3 940 381 103 0 0 chr13 46655585 46655653 -73628659 + (A)n Simple_repeat Simple_repeat 1 68 0 3 940 366 185 64 78 chr13 46655659 46655800 -73628512 - L1MB8 LINE L1 -425 5759 5621 3 940 378 0 0 0 chr13 46656121 46656163 -73628149 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 940 306 0 0 0 chr13 46656220 46656254 -73628058 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 940 245 330 20 20 chr13 46656454 46656556 -73627756 - Lx7 LINE L1 -501 7195 7094 3 940 270 362 42 35 chr13 46656556 46656573 -73627739 - MER5B DNA MER1_type -33 145 130 3 940 1387 209 94 29 chr13 46656573 46656923 -73627389 - MTEa LTR MaLR -3 376 4 3 940 270 362 42 35 chr13 46656923 46657048 -73627264 - MER5B DNA MER1_type -49 129 2 3 940 233 296 28 0 chr13 46657396 46657467 -73626845 + ID SINE ID 2 74 -150 3 940 452 300 42 30 chr13 46658000 46658165 -73626147 - MER5A DNA MER1_type 0 189 23 3 940 600 237 111 95 chr13 46658264 46658697 -73625615 - RMER10A LTR ERVL 0 442 3 3 940 609 314 48 26 chr13 46658855 46658913 -73625399 - B4 SINE B4 -16 276 218 3 940 486 0 0 0 chr13 46658913 46658967 -73625345 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 3 940 609 314 48 26 chr13 46658967 46659176 -73625136 - B4 SINE B4 -75 217 4 3 940 238 316 0 12 chr13 46659422 46659502 -73624810 - ID4 SINE ID 0 83 5 3 940 251 200 20 0 chr13 46659504 46659554 -73624758 + MLT1E3 LTR MaLR 574 624 0 3 940 1950 130 26 7 chr13 46659825 46660134 -73624178 - MTC LTR MaLR 0 421 107 3 940 524 333 0 11 chr13 46660972 46661148 -73623164 + (TATG)n Simple_repeat Simple_repeat 1 174 0 3 940 1098 250 50 95 chr13 46661156 46661439 -73622873 - B4 SINE B4 -2 290 21 3 941 644 150 12 12 chr13 46661654 46661816 -73622496 + (CA)n Simple_repeat Simple_repeat 1 162 0 3 941 838 118 55 8 chr13 46662779 46662907 -73621405 + B1_Mur1 SINE Alu 2 135 -14 3 941 317 247 14 0 chr13 46662996 46663069 -73621243 - ID4_ SINE ID -8 75 2 3 941 396 40 0 0 chr13 46663521 46663571 -73620741 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 941 433 308 19 0 chr13 46663588 46663695 -73620617 - ID_B1 SINE B4 -5 219 111 3 941 185 319 128 0 chr13 46663972 46664066 -73620246 + MIRb SINE MIR 106 211 -57 3 941 511 247 365 25 chr13 46664604 46664884 -73619428 - MTEa LTR MaLR -4 375 1 3 941 220 314 0 0 chr13 46665447 46665533 -73618779 + G-rich Low_complexity Low_complexity 1 86 0 3 941 24 67 0 0 chr13 46665762 46665807 -73618505 + AT_rich Low_complexity Low_complexity 1 45 0 3 941 619 242 0 20 chr13 46666140 46666292 -73618020 - B1F SINE Alu 0 149 1 3 941 212 86 29 0 chr13 46667176 46667211 -73617101 + (GAA)n Simple_repeat Simple_repeat 1 36 0 3 941 288 0 0 0 chr13 46667246 46667278 -73617034 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 941 459 0 0 0 chr13 46667977 46668028 -73616284 + (GA)n Simple_repeat Simple_repeat 2 52 0 3 941 351 0 0 0 chr13 46668074 46668113 -73616199 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 941 474 260 105 40 chr13 46668583 46668735 -73615577 + RSINE1 SINE B4 3 164 -1 3 941 278 324 0 0 chr13 46668805 46668879 -73615433 - B4A SINE B4 0 292 219 3 941 485 16 0 16 chr13 46668897 46668960 -73615352 + (TG)n Simple_repeat Simple_repeat 2 63 0 3 941 397 309 142 31 chr13 46668979 46669239 -73615073 - B4A SINE B4 -2 290 2 3 941 457 300 146 24 chr13 46669239 46669444 -73614868 - B4A SINE B4 -62 230 1 3 941 360 94 0 0 chr13 46669827 46669880 -73614432 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 941 402 322 62 58 chr13 46670865 46671139 -73613173 + B4 SINE B4 2 276 -16 3 941 38795 12 2 7 chr13 46671322 46676856 -73607456 + L1Md_A LINE L1 81 5586 -297 3 941 8953 14 1 0 chr13 46676856 46677851 -73606461 + L1Md_A LINE L1 5587 6582 0 3 941 345 305 29 86 chr13 46678185 46678325 -73605987 + B3A SINE B2 9 140 -58 3 941 195 42 0 0 chr13 46678351 46678375 -73605937 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 941 250 271 101 85 chr13 46678456 46678585 -73605727 - ID_B1 SINE B4 -2 222 92 3 941 451 270 72 0 chr13 46678485 46678596 -73605716 - PB1 SINE Alu -7 120 2 3 941 219 69 0 0 chr13 46679085 46679114 -73605198 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 3 941 717 261 13 6 chr13 46679356 46679514 -73604798 - MTEa LTR MaLR -4 375 217 3 941 337 274 9 36 chr13 46680026 46680136 -73604176 + GA-rich Low_complexity Low_complexity 4 110 0 3 941 315 0 0 0 chr13 46680609 46680644 -73603668 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 941 435 83 0 0 chr13 46681034 46681094 -73603218 + (TG)n Simple_repeat Simple_repeat 2 61 0 3 941 240 154 0 0 chr13 46681107 46681146 -73603166 - B1_Mus2 SINE Alu 0 147 109 3 941 989 162 0 0 chr13 46681178 46681326 -73602986 - B1_Mur4 SINE Alu 0 150 3 3 941 394 224 38 67 chr13 46681359 46681464 -73602848 - MLT1A1 LTR MaLR -1 407 306 3 941 231 329 86 86 chr13 46681510 46681696 -73602616 - MLT1A1 LTR MaLR -221 187 2 3 941 322 320 64 45 chr13 46681698 46681855 -73602457 - MLT1C LTR MaLR -307 160 1 3 941 820 254 117 42 chr13 46684237 46684570 -73599742 + ORR1E LTR MaLR 1 358 -1 3 941 300 239 92 10 chr13 46685410 46685520 -73598792 + L1M3 LINE L1 5536 5654 -529 3 941 237 213 32 16 chr13 46685755 46685817 -73598495 + GA-rich Low_complexity Low_complexity 2 64 0 3 941 423 0 0 0 chr13 46686142 46686189 -73598123 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 941 376 283 108 27 chr13 46686227 46686485 -73597827 - B4A SINE B4 -10 282 4 3 941 319 241 85 30 chr13 46686534 46686753 -73597559 - Lx8 LINE L1 -21 7623 7370 3 941 689 322 26 9 chr13 46687770 46687999 -73596313 - Lx8 LINE L1 -538 6935 6703 3 941 22 0 0 0 chr13 46688102 46688124 -73596188 + AT_rich Low_complexity Low_complexity 1 22 0 3 941 284 27 0 0 chr13 46689021 46689058 -73595254 - ORR1A2-int LTR MaLR -1472 37 1 3 941 2692 67 0 0 chr13 46689058 46689385 -73594927 - ORR1A2 LTR MaLR 0 327 1 3 941 1325 286 91 21 chr13 46689401 46689920 -73594392 + Lx8 LINE L1 6835 7389 -84 3 941 371 225 11 11 chr13 46690130 46690220 -73594092 + MLT2B4 LTR ERVL 7 96 -460 3 941 472 304 124 48 chr13 46690334 46690775 -73593537 + L2b LINE L2 2641 3134 -241 3 941 273 232 0 31 chr13 46690849 46690978 -73593334 + C-rich Low_complexity Low_complexity 3 127 0 3 941 844 195 81 23 chr13 46690999 46691172 -73593140 - ID_B1 SINE B4 -41 183 1 3 941 1318 231 151 20 chr13 46691474 46691831 -73592481 - MTD LTR MaLR -15 404 1 3 941 3185 46 25 5 chr13 46692001 46692393 -73591919 - MTB LTR MaLR 0 400 1 3 941 1040 295 10 51 chr13 46692393 46692686 -73591626 + B4A SINE B4 12 292 0 3 941 1885 213 16 35 chr13 46692919 46693294 -73591018 - MTE2b LTR MaLR -11 368 1 3 941 210 136 0 0 chr13 46695429 46695473 -73588839 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 3 941 333 319 108 36 chr13 46695700 46695895 -73588417 - L1MC4 LINE L1 -5177 1038 830 3 941 460 256 6 194 chr13 46695915 46696085 -73588227 - ID_B1 SINE B4 0 224 87 3 941 709 241 46 36 chr13 46696489 46696683 -73587629 + B3A SINE B2 1 196 -2 3 941 330 26 0 0 chr13 46696962 46697001 -73587311 + (GGGA)n Simple_repeat Simple_repeat 3 41 0 3 941 600 234 135 15 chr13 46697194 46697394 -73586918 - ID_B1 SINE B4 0 224 1 3 941 601 282 73 7 chr13 46697674 46697824 -73586488 - B3A SINE B2 -38 160 1 3 941 498 273 6 94 chr13 46697830 46698000 -73586312 - ID_B1 SINE B4 -69 155 1 3 941 414 324 19 58 chr13 46698119 46698273 -73586039 + ORR1E LTR MaLR 32 179 -180 3 941 321 283 20 29 chr13 46698756 46698858 -73585454 + ORR1E LTR MaLR 279 379 0 3 941 1070 176 107 11 chr13 46698950 46699220 -73585092 - Lx9 LINE L1 0 7644 7349 3 941 1259 177 16 29 chr13 46699643 46699887 -73584425 - Lx9 LINE L1 -270 7374 7134 3 941 353 309 93 6 chr13 46699898 46700080 -73584232 - Lx8 LINE L1 0 7473 7276 3 941 791 219 119 10 chr13 46700356 46700550 -73583762 + B3 SINE B2 1 215 -1 4 941 364 222 14 0 chr13 46700577 46700649 -73583663 + RSINE1 SINE B4 4 76 -89 4 941 201 175 0 0 chr13 46701285 46701325 -73582987 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 941 486 258 111 97 chr13 46701340 46701628 -73582684 - B4A SINE B4 0 292 1 4 941 558 305 94 15 chr13 46701704 46701970 -73582342 + B4A SINE B4 2 288 -4 4 941 258 156 0 0 chr13 46702042 46702087 -73582225 + (CAA)n Simple_repeat Simple_repeat 3 47 0 4 941 257 279 0 14 chr13 46702114 46702183 -73582129 + ID4_ SINE ID 5 72 -11 4 941 244 325 0 98 chr13 46703028 46703120 -73581192 + MT2B LTR ERVL 156 238 -363 4 941 402 283 33 0 chr13 46703046 46703138 -73581174 + B1F2 SINE Alu 10 104 -45 4 941 334 180 0 0 chr13 46703142 46703203 -73581109 + MTEa LTR MaLR 314 374 -5 4 941 299 325 0 0 chr13 46703358 46703441 -73580871 - MIRb SINE MIR -156 112 30 4 941 271 325 0 0 chr13 46703639 46703709 -73580603 - MER2B DNA MER2_type -262 74 5 4 941 257 329 12 35 chr13 46703724 46703747 -73580565 + ID4_ SINE ID 1 24 -59 4 941 3989 115 116 19 chr13 46703747 46704436 -73579876 + RMER6A LTR ERVK 1 756 0 4 941 257 329 12 35 chr13 46704436 46704497 -73579815 + ID4_ SINE ID 25 83 0 4 941 227 340 21 0 chr13 46704497 46704591 -73579721 + GA-rich Low_complexity Low_complexity 1 96 0 4 941 1375 88 16 10 chr13 46704620 46704814 -73579498 + B2_Mm2 SINE B2 1 195 0 4 941 532 279 8 8 chr13 46705644 46705767 -73578545 + ID_B1 SINE B4 102 224 0 4 941 284 269 69 63 chr13 46705769 46705928 -73578384 + RSINE1 SINE B4 4 163 -2 4 941 339 216 182 80 chr13 46705966 46706142 -73578170 + B3A SINE B2 1 194 -4 4 941 27 49 0 0 chr13 46706149 46706190 -73578122 + AT_rich Low_complexity Low_complexity 1 41 0 4 941 325 186 3 96 chr13 46706383 46706480 -73577832 - PB1D7 SINE Alu 0 149 48 4 941 444 220 70 52 chr13 46707292 46707304 -73577008 - PB1D10 SINE Alu 0 117 109 4 941 351 0 0 0 chr13 46707304 46707343 -73576969 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 4 941 444 220 70 52 chr13 46707343 46707445 -73576867 - PB1D10 SINE Alu -9 108 1 4 941 206 105 0 26 chr13 46707467 46707506 -73576806 + (CATA)n Simple_repeat Simple_repeat 2 39 0 4 941 234 275 174 0 chr13 46707759 46707828 -73576484 - ID4_ SINE ID -1 82 2 4 941 380 212 55 96 chr13 46707846 46707992 -73576320 - B1F SINE Alu -8 141 2 4 941 225 0 0 0 chr13 46708747 46708772 -73575540 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 941 844 276 74 33 chr13 46709051 46709388 -73574924 - ORR1E LTR MaLR -4 355 5 4 941 183 80 0 0 chr13 46709722 46709747 -73574565 + (TAA)n Simple_repeat Simple_repeat 2 26 0 4 941 1250 41 0 0 chr13 46709828 46709974 -73574338 + B1_Mus2 SINE Alu 2 147 0 4 941 225 0 0 0 chr13 46709974 46709999 -73574313 + (A)n Simple_repeat Simple_repeat 1 25 0 4 941 400 215 29 17 chr13 46710916 46711043 -73573269 + L1MA4 LINE L1 5793 5917 -383 4 941 589 310 81 0 chr13 46711439 46711636 -73572676 - ID_B1 SINE B4 -10 214 2 4 941 739 221 40 11 chr13 46711849 46712023 -73572289 + URR1B DNA MER1_type 45 223 -2 4 941 234 229 32 16 chr13 46713259 46713321 -73570991 + ID4 SINE ID 5 67 -16 4 941 472 238 33 3 chr13 46713970 46714085 -73570227 + B3A SINE B2 3 128 -65 4 941 557 250 8 15 chr13 46714183 46714317 -73569995 + B3 SINE B2 79 211 -5 4 941 234 0 0 0 chr13 46714623 46714649 -73569663 + (TG)n Simple_repeat Simple_repeat 1 26 0 4 941 486 88 0 0 chr13 46714649 46714717 -73569595 + (GA)n Simple_repeat Simple_repeat 2 69 0 4 941 647 180 49 8 chr13 46714717 46714840 -73569472 - RSINE1 SINE B4 -35 130 3 4 941 4904 158 27 19 chr13 46715827 46716720 -73567592 - RMER17B LTR ERVK -58 900 1 4 941 245 338 69 41 chr13 46716971 46717116 -73567196 + MER5A1 DNA MER1_type 14 162 -4 4 941 897 219 33 23 chr13 46717198 46717413 -73566899 - ID_B1 SINE B4 -7 217 1 4 941 817 158 0 21 chr13 46717529 46717656 -73566656 + B1_Mur4 SINE Alu 12 137 -13 4 941 204 67 0 0 chr13 46717656 46717686 -73566626 + (CAGAGA)n Simple_repeat Simple_repeat 1 30 0 4 941 336 48 0 0 chr13 46717690 46717732 -73566580 + (GGA)n Simple_repeat Simple_repeat 2 43 0 4 941 466 68 40 0 chr13 46717750 46717824 -73566488 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 4 941 838 302 23 85 chr13 46718679 46719027 -73565285 + MTEa LTR MaLR 51 370 -4 4 941 415 276 0 28 chr13 46719762 46719870 -73564442 + PB1D10 SINE Alu 5 109 -8 4 941 598 216 263 0 chr13 46719875 46720046 -73564266 - B3 SINE B2 0 216 1 4 941 367 248 18 37 chr13 46720223 46720332 -73563980 - MLT1A1 LTR MaLR -8 400 294 4 941 1341 89 0 6 chr13 46720367 46720547 -73563765 + B2_Mm2 SINE B2 1 179 -16 4 941 906 221 115 23 chr13 46720864 46721124 -73563188 + B4 SINE B4 1 284 -8 4 941 694 215 187 5 chr13 46722822 46723009 -73561303 - ID_B1 SINE B4 -2 222 2 4 941 563 300 25 57 chr13 46723547 46723830 -73560482 - B4A SINE B4 -16 276 3 4 941 330 26 0 0 chr13 46723958 46723997 -73560315 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 941 396 228 121 8 chr13 46723997 46724121 -73560191 + B1F2 SINE Alu 1 138 -11 4 941 288 0 0 0 chr13 46724252 46724284 -73560028 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 941 460 168 53 0 chr13 46724380 46724475 -73559837 + ID_B1 SINE B4 106 205 -19 4 941 253 0 54 0 chr13 46724509 46724546 -73559766 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 941 553 139 26 61 chr13 46725603 46725718 -73558594 + PB1D7 SINE Alu 10 120 0 4 941 231 114 0 0 chr13 46726028 46726063 -73558249 + (A)n Simple_repeat Simple_repeat 1 35 0 4 941 191 105 53 0 chr13 46726644 46726682 -73557630 + T-rich Low_complexity Low_complexity 2 41 0 4 941 520 254 0 8 chr13 46726702 46726825 -73557487 + RSINE1 SINE B4 3 124 -41 4 941 345 266 35 17 chr13 46727748 46727863 -73556449 + PB1D10 SINE Alu 1 117 0 4 941 321 196 15 152 chr13 46728000 46728132 -73556180 - Lx8 LINE L1 -2 7471 7358 4 941 375 328 68 8 chr13 46728168 46728300 -73556012 + RSINE1 SINE B4 22 161 -4 4 941 461 266 18 0 chr13 46728333 46728446 -73555866 + ID_B1 SINE B4 84 198 -26 4 941 296 220 27 99 chr13 46728466 46728577 -73555735 + Lx8 LINE L1 7369 7471 -2 4 941 225 0 0 0 chr13 46728887 46728912 -73555400 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 941 186 43 0 0 chr13 46729100 46729123 -73555189 + (CCCCCA)n Simple_repeat Simple_repeat 3 25 0 4 941 226 0 0 56 chr13 46729947 46729983 -73554329 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 4 941 277 269 92 20 chr13 46730317 46730439 -73553873 - B1F SINE Alu -8 141 12 4 941 502 263 0 9 chr13 46730534 46730649 -73553663 + B3A SINE B2 7 120 -78 4 941 345 62 0 0 chr13 46730674 46730722 -73553590 - B2_Mm2 SINE B2 -146 49 2 4 941 1142 281 25 28 chr13 46732023 46732382 -73551930 - MTEa LTR MaLR -1 378 21 4 941 532 250 32 116 chr13 46732409 46732599 -73551713 - ORR1E LTR MaLR -167 192 19 4 941 450 0 0 0 chr13 46732624 46732674 -73551638 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 941 965 204 169 45 chr13 46732838 46733209 -73551103 - MTE2a LTR MaLR -14 405 4 4 941 270 0 0 0 chr13 46733494 46733524 -73550788 + (A)n Simple_repeat Simple_repeat 1 30 0 4 941 267 31 0 0 chr13 46733564 46733596 -73550716 + (T)n Simple_repeat Simple_repeat 1 32 0 4 941 737 158 60 0 chr13 46733660 46733793 -73550519 - B1_Mur4 SINE Alu -4 146 6 4 941 394 288 80 50 chr13 46733806 46733852 -73550460 - L1MB3 LINE L1 -1 6182 6134 4 941 2756 142 36 51 chr13 46733852 46734385 -73549927 - RLTR11A2 LTR ERVK 0 527 3 4 941 394 288 80 50 chr13 46734385 46734576 -73549736 - L1MB3 LINE L1 -50 6133 5938 4 941 213 163 0 0 chr13 46735766 46735815 -73548497 + T-rich Low_complexity Low_complexity 1 49 0 4 941 1191 56 0 0 chr13 46735815 46735959 -73548353 - B1_Mus1 SINE Alu 0 148 5 4 941 362 292 12 32 chr13 46736852 46737034 -73547278 + L1M5 LINE L1 4079 4255 -1891 4 941 248 331 29 51 chr13 46737374 46737511 -73546801 + B3A SINE B2 49 182 -16 4 941 835 201 39 34 chr13 46737769 46737975 -73546337 + B3 SINE B2 1 207 -9 4 941 299 288 0 0 chr13 46738198 46738271 -73546041 + ID4_ SINE ID 3 75 -8 4 941 285 29 0 0 chr13 46738278 46738312 -73546000 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 941 1239 81 87 0 chr13 46739257 46739430 -73544882 - B2_Mm2 SINE B2 -7 188 1 4 941 537 191 112 22 chr13 46739591 46739725 -73544587 + B1F2 SINE Alu 2 147 -2 4 941 560 261 14 21 chr13 46739724 46739865 -73544447 + ID_B1 SINE B4 70 209 -15 4 941 711 112 0 0 chr13 46739866 46739973 -73544339 + (GGAA)n Simple_repeat Simple_repeat 4 110 0 4 941 320 333 50 25 chr13 46740305 46740466 -73543846 + L1ME1 LINE L1 5962 6129 -50 4 941 297 0 0 0 chr13 46740751 46740784 -73543528 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 941 306 0 0 0 chr13 46742206 46742240 -73542072 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 4 941 1217 71 0 6 chr13 46742341 46742510 -73541802 - B2_Mm2 SINE B2 -26 169 2 4 941 450 241 197 82 chr13 46742683 46742927 -73541385 - B4 SINE B4 -20 272 1 4 941 491 225 17 35 chr13 46743326 46743441 -73540871 + ID_B1 SINE B4 105 217 -7 4 941 535 300 8 0 chr13 46745118 46745248 -73539064 + RSINE1 SINE B4 30 160 -5 5 941 318 50 0 0 chr13 46745255 46745295 -73539017 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 941 29 28 0 0 chr13 46745297 46745333 -73538979 + AT_rich Low_complexity Low_complexity 1 36 0 5 941 599 212 92 35 chr13 46745341 46745529 -73538783 + B3 SINE B2 1 180 -18 5 941 32 0 0 0 chr13 46745613 46745645 -73538667 + AT_rich Low_complexity Low_complexity 1 32 0 5 941 1498 39 17 0 chr13 46745686 46745864 -73538448 + B2_Mm2 SINE B2 1 181 -14 5 941 180 0 0 0 chr13 46745867 46745887 -73538425 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 5 941 604 216 0 16 chr13 46746671 46746798 -73537514 - ORR1E LTR MaLR -20 359 235 5 941 488 214 35 35 chr13 46746796 46746941 -73537371 - RLTR11B LTR ERVK -4 449 305 5 941 736 271 8 53 chr13 46747086 46747351 -73536961 - RLTR11B LTR ERVK -196 257 5 5 941 766 219 39 17 chr13 46747371 46747552 -73536760 - ORR1E LTR MaLR -173 186 2 5 941 449 289 42 0 chr13 46747648 46747790 -73536522 - B1F SINE Alu -1 148 1 5 941 575 246 0 0 chr13 46748384 46748526 -73535786 + ID_B1 SINE B4 81 222 -2 5 941 242 304 77 55 chr13 46748589 46748692 -73535620 - Charlie7 DNA MER1_type -427 2185 2077 5 941 582 200 168 26 chr13 46748692 46748872 -73535440 + ID_B1 SINE B4 4 211 -13 5 941 324 0 0 0 chr13 46748872 46748908 -73535404 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 5 941 242 304 77 55 chr13 46748917 46748994 -73535318 - Charlie7 DNA MER1_type -536 2076 2001 5 941 319 239 45 0 chr13 46749488 46749576 -73534736 + PB1D7 SINE Alu 28 119 -1 5 941 303 348 30 60 chr13 46749580 46749748 -73534564 + RSINE1 SINE B4 3 165 0 5 941 531 278 78 54 chr13 46750473 46750548 -73533764 + B4A SINE B4 8 81 -211 5 941 315 0 0 0 chr13 46750548 46750583 -73533729 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 5 941 531 278 78 54 chr13 46750583 46750712 -73533600 + B4A SINE B4 82 217 -75 5 941 740 270 58 9 chr13 46750727 46750951 -73533361 + Lx9 LINE L1 7046 7280 -364 5 941 656 244 75 33 chr13 46750986 46751198 -73533114 + B4A SINE B4 58 278 -14 5 941 618 194 30 75 chr13 46751498 46751632 -73532680 - Lx9 LINE L1 -412 7232 7105 5 941 1127 213 150 28 chr13 46751631 46751686 -73532626 + Lx9 LINE L1 7246 7308 -336 5 941 827 102 8 0 chr13 46751686 46751814 -73532498 + (CA)n Simple_repeat Simple_repeat 1 129 0 5 941 1127 213 150 28 chr13 46751814 46752111 -73532201 + Lx9 LINE L1 7309 7641 -3 5 941 28 48 0 0 chr13 46752266 46752308 -73532004 + AT_rich Low_complexity Low_complexity 1 42 0 5 941 21 0 0 0 chr13 46752383 46752404 -73531908 + AT_rich Low_complexity Low_complexity 1 21 0 5 941 3077 127 63 34 chr13 46752529 46753083 -73531229 + Lx2B LINE L1 6431 7000 0 5 941 617 165 85 23 chr13 46753244 46753374 -73530938 + B1_Mur2 SINE Alu 9 146 -3 5 941 213 39 0 0 chr13 46753375 46753401 -73530911 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 5 941 614 326 91 0 chr13 46753493 46753735 -73530577 - MLT1E1 LTR MaLR -389 265 2 5 941 1110 197 191 70 chr13 46753974 46754357 -73529955 - MT2A LTR ERVL -100 433 5 5 941 974 125 12 29 chr13 46754537 46754710 -73529602 + B2_Mm2 SINE B2 1 170 -25 5 941 821 250 5 52 chr13 46754720 46754914 -73529398 - B3A SINE B2 -10 188 4 5 941 597 124 21 0 chr13 46755360 46755457 -73528855 - B1_Mur2 SINE Alu -10 139 41 5 941 551 284 25 45 chr13 46755533 46755732 -73528580 - B3A SINE B2 0 198 4 5 941 810 166 89 30 chr13 46755791 46755959 -73528353 + URR1B DNA MER1_type 11 188 -37 5 941 405 0 0 0 chr13 46756006 46756051 -73528261 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 5 941 5356 134 23 15 chr13 46756290 46756521 -73527791 + RMER17B LTR ERVK 1 231 -727 5 941 2850 42 100 0 chr13 46756521 46756881 -73527431 - MTA_Mm LTR MaLR 0 396 1 5 941 5356 134 23 15 chr13 46756881 46757599 -73526713 + RMER17B LTR ERVK 232 958 0 5 941 3875 148 85 65 chr13 46757781 46758629 -73525683 - RMER19B LTR ERVK -12 890 26 5 941 574 277 57 0 chr13 46758839 46758998 -73525314 + ID_B1 SINE B4 55 222 -2 5 941 191 62 0 59 chr13 46759005 46759039 -73525273 + (GGAGA)n Simple_repeat Simple_repeat 1 32 0 5 941 189 74 0 0 chr13 46759298 46759325 -73524987 + (TTA)n Simple_repeat Simple_repeat 3 29 0 5 941 28 0 0 0 chr13 46759481 46759509 -73524803 + AT_rich Low_complexity Low_complexity 1 28 0 5 941 297 0 0 0 chr13 46759677 46759710 -73524602 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 5 941 855 176 0 13 chr13 46759710 46759852 -73524460 - B1_Mur4 SINE Alu -8 142 3 5 941 267 255 124 29 chr13 46759927 46760032 -73524280 + PB1D10 SINE Alu 3 117 0 5 941 719 222 44 49 chr13 46760497 46760701 -73523611 + B3 SINE B2 1 203 -13 5 941 875 129 11 11 chr13 46760786 46760918 -73523394 + polypyrimidine Low_complexity Low_complexity 48 180 0 5 941 1010 135 6 0 chr13 46760918 46761096 -73523216 + (TC)n Simple_repeat Simple_repeat 1 179 0 5 941 875 129 11 11 chr13 46761096 46761143 -73523169 + polypyrimidine Low_complexity Low_complexity 1 47 0 5 941 421 266 86 50 chr13 46761177 46761375 -73522937 - B4A SINE B4 -86 206 2 5 941 355 53 379 21 chr13 46761522 46761617 -73522695 - B2_Mm2 SINE B2 -20 175 47 5 941 1259 107 11 0 chr13 46761627 46761805 -73522507 - B2_Mm1a SINE B2 -11 182 3 5 941 596 248 44 38 chr13 46762007 46762166 -73522146 + RSINE1 SINE B4 6 165 0 5 941 288 0 0 0 chr13 46762523 46762555 -73521757 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 941 229 300 17 0 chr13 46762592 46762652 -73521660 - PB1 SINE Alu -64 63 3 5 941 983 206 151 21 chr13 46762774 46763112 -73521200 + RLTR28B LTR ERVL 1 382 -99 5 941 954 140 0 51 chr13 46763392 46763550 -73520762 + B1_Mur4 SINE Alu 1 150 0 5 941 228 161 16 31 chr13 46763561 46763625 -73520687 + GA-rich Low_complexity Low_complexity 3 65 0 5 941 1855 128 133 3 chr13 46763893 46764247 -73520065 - MTC LTR MaLR -21 400 1 5 941 183 156 0 0 chr13 46765048 46765080 -73519232 + (CCG)n Simple_repeat Simple_repeat 2 33 0 5 941 294 157 24 12 chr13 46765336 46765420 -73518892 + (CCG)n Simple_repeat Simple_repeat 3 87 0 5 941 29 28 0 0 chr13 46765458 46765494 -73518818 + GC_rich Low_complexity Low_complexity 1 36 0 5 941 24 0 0 0 chr13 46765697 46765721 -73518591 + AT_rich Low_complexity Low_complexity 1 24 0 5 941 246 185 138 0 chr13 46765744 46765809 -73518503 - B1F SINE Alu -8 141 68 5 941 231 205 0 0 chr13 46766362 46766401 -73517911 - B1F SINE Alu -110 39 1 5 941 618 269 98 26 chr13 46766866 46767130 -73517182 - B4A SINE B4 -9 283 1 5 941 593 144 82 0 chr13 46767199 46767296 -73517016 + PB1D9 SINE Alu 10 114 -6 5 941 408 241 74 0 chr13 46767420 46767528 -73516784 + B3A SINE B2 1 116 -82 5 941 1673 142 102 25 chr13 46768287 46768612 -73515700 - MTD LTR MaLR -16 403 54 5 941 374 232 194 39 chr13 46769433 46769536 -73514776 - B1_Mur1 SINE Alu -29 120 2 5 941 204 194 0 0 chr13 46771712 46771748 -73512564 + G-rich Low_complexity Low_complexity 2 37 0 5 941 23 0 0 0 chr13 46772370 46772393 -73511919 + AT_rich Low_complexity Low_complexity 1 23 0 5 941 359 323 0 0 chr13 46773661 46773757 -73510555 + PB1D7 SINE Alu 24 119 -1 5 941 24 0 0 0 chr13 46774869 46774893 -73509419 + AT_rich Low_complexity Low_complexity 1 24 0 5 941 432 208 94 62 chr13 46777158 46777286 -73507026 + B1_Mur3 SINE Alu 2 133 -16 5 941 234 135 111 37 chr13 46778881 46778935 -73505377 - B1F1 SINE Alu -13 136 79 5 941 1050 152 6 0 chr13 46780306 46780471 -73503841 + B2_Mm1t SINE B2 2 167 -26 5 941 270 23 279 0 chr13 46780507 46780550 -73503762 + B2_Mm2 SINE B2 47 101 -94 5 941 264 250 13 65 chr13 46781086 46781163 -73503149 - ID4 SINE ID -9 74 2 5 941 572 216 31 31 chr13 46781223 46781352 -73502960 - B3A SINE B2 -69 129 1 5 941 225 0 0 0 chr13 46783393 46783418 -73500894 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 941 23 0 0 0 chr13 46784264 46784287 -73500025 + AT_rich Low_complexity Low_complexity 1 23 0 5 941 306 0 0 0 chr13 46784713 46784747 -73499565 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 941 222 182 0 22 chr13 46784920 46784965 -73499347 + B4 SINE B4 10 53 -239 5 941 1063 95 0 26 chr13 46784974 46785125 -73499187 + B1_Mus2 SINE Alu 1 147 0 5 941 204 278 0 0 chr13 46785380 46785434 -73498878 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 941 568 269 7 21 chr13 46785564 46785708 -73498604 + B1_Mur1 SINE Alu 2 143 -6 5 941 458 291 193 57 chr13 46786440 46786844 -73497468 - Lx8 LINE L1 -1 7472 7014 5 941 535 298 50 55 chr13 46787229 46787410 -73496902 + B3 SINE B2 37 216 0 5 941 292 237 153 10 chr13 46787478 46787576 -73496736 + B3 SINE B2 92 203 -13 5 941 819 62 47 0 chr13 46787728 46787856 -73496456 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 5 941 411 21 0 0 chr13 46788361 46788409 -73495903 + (TATG)n Simple_repeat Simple_repeat 3 50 0 5 941 214 333 57 14 chr13 46789955 46790025 -73494287 - B1F SINE Alu -42 107 35 5 941 483 243 50 35 chr13 46790509 46790650 -73493662 + B1_Mur1 SINE Alu 1 143 -6 5 941 342 139 310 11 chr13 46790901 46790988 -73493324 + B1_Mus1 SINE Alu 35 147 -1 5 941 304 216 93 93 chr13 46791422 46791441 -73492871 + MT2B2 LTR ERVL 151 169 -415 5 941 474 231 148 0 chr13 46791441 46791549 -73492763 + B1_Mur4 SINE Alu 2 125 -25 5 941 425 19 0 18 chr13 46791574 46791629 -73492683 + (TAAA)n Simple_repeat Simple_repeat 1 54 0 5 941 1526 138 30 19 chr13 46792351 46792616 -73491696 - RMER20B LTR ERVK -359 268 1 5 942 565 172 350 0 chr13 46793049 46793206 -73491106 - B3 SINE B2 -2 214 3 5 942 293 257 18 106 chr13 46793234 46793347 -73490965 - ID_B1 SINE B4 -8 216 114 5 942 292 284 40 0 chr13 46794195 46794269 -73490043 + B4A SINE B4 74 150 -142 6 942 383 229 182 25 chr13 46794214 46794335 -73489977 + B1_Mur2 SINE Alu 9 148 -1 6 942 357 249 33 22 chr13 46795265 46795357 -73488955 + PB1 SINE Alu 35 148 -1 6 942 22 0 0 0 chr13 46795534 46795556 -73488756 + AT_rich Low_complexity Low_complexity 1 22 0 6 942 201 209 0 56 chr13 46795577 46795635 -73488677 + A-rich Low_complexity Low_complexity 6 62 0 6 942 530 226 76 55 chr13 46795635 46795780 -73488532 + B1_Mur1 SINE Alu 1 148 -1 6 942 201 209 0 56 chr13 46795780 46795792 -73488520 + A-rich Low_complexity Low_complexity 63 72 0 6 942 198 0 0 0 chr13 46796466 46796488 -73487824 + (T)n Simple_repeat Simple_repeat 1 22 0 6 942 180 313 87 29 chr13 46797236 46797305 -73487007 + MIRc SINE MIR 23 95 -173 6 942 465 252 118 0 chr13 46797342 46797461 -73486851 + RSINE1 SINE B4 3 135 -30 6 942 258 106 0 0 chr13 46797479 46797526 -73486786 + (CTCA)n Simple_repeat Simple_repeat 4 50 0 6 942 1326 76 21 26 chr13 46797680 46797870 -73486442 + B2_Mm2 SINE B2 1 189 -6 6 942 578 302 35 54 chr13 46798602 46798805 -73485507 + B3 SINE B2 14 212 -4 6 942 380 309 70 32 chr13 46799042 46799199 -73485113 - RSINE1 SINE B4 0 165 3 6 942 262 244 182 23 chr13 46799471 46799647 -73484665 + L1M5 LINE L1 5614 5817 -423 6 942 369 0 0 0 chr13 46799788 46799829 -73484483 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 6 942 538 324 0 7 chr13 46800291 46800431 -73483881 - RSINE1 SINE B4 -22 143 5 6 942 23 0 0 0 chr13 46800607 46800630 -73483682 + AT_rich Low_complexity Low_complexity 1 23 0 6 942 361 253 0 24 chr13 46800651 46800736 -73483576 - ID_B1 SINE B4 -34 190 108 6 942 267 159 60 60 chr13 46800723 46800790 -73483522 - tRNA-Ala-GCA tRNA tRNA -6 69 3 6 942 251 203 55 55 chr13 46800725 46800798 -73483514 - ID4_ SINE ID -10 73 1 6 942 268 257 14 41 chr13 46801783 46801856 -73482456 + ID2 SINE ID 4 74 -9 6 942 221 0 0 33 chr13 46801856 46801886 -73482426 + (TAA)n Simple_repeat Simple_repeat 3 31 0 6 942 291 226 70 31 chr13 46802145 46802273 -73482039 + L1M4 LINE L1 5630 5762 -416 6 942 268 314 84 35 chr13 46802956 46803098 -73481214 + B1F SINE Alu 1 149 0 6 942 658 248 24 60 chr13 46803678 46803845 -73480467 + B3 SINE B2 47 207 -9 6 942 28 0 0 0 chr13 46803846 46803874 -73480438 + AT_rich Low_complexity Low_complexity 1 28 0 6 942 180 0 0 0 chr13 46804469 46804489 -73479823 + (G)n Simple_repeat Simple_repeat 1 20 0 6 942 386 192 37 83 chr13 46804518 46804626 -73479686 + MT2B LTR ERVL 156 258 -343 6 942 483 205 89 8 chr13 46804537 46804660 -73479652 + B1_Mus2 SINE Alu 15 147 0 6 942 1432 126 278 0 chr13 46805616 46805918 -73478394 - ORR1B1 LTR MaLR -8 386 1 6 942 710 195 394 0 chr13 46806201 46806579 -73477733 + Lx9 LINE L1 6573 7099 -545 6 942 281 218 81 31 chr13 46806618 46806779 -73477533 + L1MC LINE L1 4877 5045 -1101 6 942 28 0 0 0 chr13 46806960 46806988 -73477324 + AT_rich Low_complexity Low_complexity 1 28 0 6 942 686 141 83 38 chr13 46806997 46807130 -73477182 + B1_Mus2 SINE Alu 4 142 -5 6 942 396 224 17 25 chr13 46807175 46807294 -73477018 + L1M5 LINE L1 5381 5498 -681 6 942 21 0 0 0 chr13 46808350 46808371 -73475941 + AT_rich Low_complexity Low_complexity 1 21 0 6 942 30 59 0 0 chr13 46808408 46808459 -73475853 + AT_rich Low_complexity Low_complexity 1 51 0 6 942 807 163 7 26 chr13 46808459 46808610 -73475702 + B1_Mus1 SINE Alu 1 148 0 6 942 675 263 86 0 chr13 46808630 46808828 -73475484 + B3 SINE B2 2 216 0 6 942 399 323 7 38 chr13 46808863 46809000 -73475312 + B1F1 SINE Alu 11 141 -8 6 942 360 263 26 0 chr13 46809816 46809892 -73474420 + B4A SINE B4 209 286 -6 6 942 25 0 0 0 chr13 46810040 46810065 -73474247 + AT_rich Low_complexity Low_complexity 1 25 0 6 942 222 328 119 0 chr13 46810464 46810531 -73473781 + ID4_ SINE ID 3 77 -6 6 942 249 33 0 0 chr13 46810790 46810820 -73473492 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 942 469 234 35 42 chr13 46811092 46811235 -73473077 + MTD LTR MaLR 2 143 -276 6 942 2077 107 101 13 chr13 46811270 46811658 -73472654 - BGLII_Mus LTR ERVK 0 422 1 6 942 308 242 32 0 chr13 46811665 46811727 -73472585 - PB1D9 SINE Alu -54 66 3 6 942 888 168 278 17 chr13 46811747 46811977 -73472335 + MTD LTR MaLR 130 419 0 6 942 402 324 27 40 chr13 46812152 46812300 -73472012 + RSINE1 SINE B4 20 165 0 6 942 257 273 24 61 chr13 46812952 46813034 -73471278 + ID2 SINE ID 2 80 -3 6 942 24 0 0 0 chr13 46813149 46813173 -73471139 + AT_rich Low_complexity Low_complexity 1 24 0 6 942 991 76 38 0 chr13 46813191 46813322 -73470990 + B1_Mus2 SINE Alu 1 136 -11 6 942 792 149 66 15 chr13 46814455 46814591 -73469721 + B1_Mur4 SINE Alu 1 143 -7 6 942 239 286 172 10 chr13 46814879 46814978 -73469334 + MER5A DNA MER1_type 74 188 -1 6 942 894 153 0 20 chr13 46815066 46815213 -73469099 + B1_Mur3 SINE Alu 5 148 -1 6 942 1133 56 7 0 chr13 46815545 46815687 -73468625 + B1_Mm SINE Alu 5 147 0 6 942 930 85 0 0 chr13 46815860 46815989 -73468323 + (GAAA)n Simple_repeat Simple_repeat 4 132 0 6 942 27 0 0 0 chr13 46816322 46816349 -73467963 + AT_rich Low_complexity Low_complexity 1 27 0 6 942 556 226 51 21 chr13 46817385 46817537 -73466775 + B1F SINE Alu 2 148 0 6 942 939 222 23 0 chr13 46817541 46817717 -73466595 + B3A SINE B2 1 180 -18 6 942 1387 80 11 0 chr13 46818255 46818443 -73465869 + B2_Mm2 SINE B2 1 190 -5 6 942 321 197 0 0 chr13 46818492 46818558 -73465754 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 6 942 1009 105 35 0 chr13 46818898 46819041 -73465271 + B1_Mus1 SINE Alu 1 148 0 6 942 213 119 0 0 chr13 46819639 46819681 -73464631 + (A)n Simple_repeat Simple_repeat 1 42 0 6 942 238 292 46 0 chr13 46820120 46820185 -73464127 + PB1D10 SINE Alu 38 105 -12 6 942 392 287 98 23 chr13 46820269 46820401 -73463911 - B1F1 SINE Alu -7 142 1 6 942 220 234 0 0 chr13 46820485 46820532 -73463780 + A-rich Low_complexity Low_complexity 1 47 0 6 942 189 0 0 0 chr13 46822448 46822469 -73461843 + (CAG)n Simple_repeat Simple_repeat 2 22 0 6 942 260 158 18 0 chr13 46823247 46823304 -73461008 + (CCG)n Simple_repeat Simple_repeat 3 60 0 6 942 308 298 0 12 chr13 46823783 46823868 -73460444 + PB1D10 SINE Alu 34 117 0 6 942 209 351 52 21 chr13 46823989 46824085 -73460227 + MIRb SINE MIR 161 259 -9 6 942 805 172 27 14 chr13 46824331 46824478 -73459834 + B1_Mur3 SINE Alu 1 149 0 6 942 445 234 117 31 chr13 46824640 46824768 -73459544 + MIRb SINE MIR 37 175 -93 6 942 207 0 0 0 chr13 46825637 46825660 -73458652 + (A)n Simple_repeat Simple_repeat 1 23 0 6 942 457 269 9 9 chr13 46825880 46825996 -73458316 + PB1D10 SINE Alu 1 116 -1 6 942 1100 68 0 22 chr13 46826029 46826209 -73458103 + (TG)n Simple_repeat Simple_repeat 2 177 0 6 942 2585 162 84 51 chr13 46826504 46826856 -73457456 + RLTR40 LTR ERVK 1 385 -432 6 942 2905 39 3 14 chr13 46826856 46827219 -73457093 - L1Md_F2 LINE L1 -3 6579 6221 6 942 2585 177 82 35 chr13 46827219 46827555 -73456757 + RLTR40 LTR ERVK 386 807 -10 6 942 1088 198 14 0 chr13 46827687 46827894 -73456418 + B3 SINE B2 1 210 -6 6 942 253 177 177 0 chr13 46828315 46828377 -73455935 - ID4_ SINE ID -9 74 2 6 942 377 281 32 40 chr13 46828433 46828559 -73455753 - RSINE1 SINE B4 -13 152 28 6 942 562 285 0 7 chr13 46828607 46828759 -73455553 - B3A SINE B2 -23 175 25 6 942 300 262 26 61 chr13 46828781 46828895 -73455417 - PB1D10 SINE Alu -7 110 1 6 942 299 287 17 42 chr13 46829162 46829282 -73455030 + PB1D7 SINE Alu 1 117 -3 6 942 253 257 57 0 chr13 46829335 46829405 -73454907 - tRNA-Ala-GCG tRNA tRNA -1 74 1 6 942 23 0 0 0 chr13 46829461 46829484 -73454828 + AT_rich Low_complexity Low_complexity 1 23 0 6 942 615 280 21 69 chr13 46829631 46829819 -73454493 - B3A SINE B2 0 198 20 6 942 743 152 40 0 chr13 46829825 46829950 -73454362 - B1_Mus2 SINE Alu -6 141 12 6 942 304 245 0 0 chr13 46830306 46830359 -73453953 + RSINE1 SINE B4 29 81 -84 6 942 219 289 130 22 chr13 46830359 46830435 -73453877 + B2_Mm2 SINE B2 33 170 -25 6 942 259 182 26 0 chr13 46830530 46830607 -73453705 + GA-rich Low_complexity Low_complexity 2 80 0 6 942 420 20 0 0 chr13 46832527 46832576 -73451736 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 942 393 194 0 0 chr13 46832617 46832684 -73451628 - RSINE1 SINE B4 -96 69 3 6 942 186 43 0 0 chr13 46832768 46832791 -73451521 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 942 689 152 96 0 chr13 46832791 46832916 -73451396 - B1_Mus1 SINE Alu -10 138 2 6 942 540 252 63 21 chr13 46832918 46833060 -73451252 - B1F SINE Alu -1 148 1 6 942 332 275 0 0 chr13 46833212 46833281 -73451031 - ID4 SINE ID -9 74 6 6 942 232 143 0 0 chr13 46833601 46833636 -73450676 + B1_Mm SINE Alu 97 131 -16 6 942 1299 60 59 21 chr13 46833636 46833823 -73450489 - B2_Mm2 SINE B2 -1 194 1 6 942 639 250 55 14 chr13 46833848 46833994 -73450318 - B3 SINE B2 0 216 65 6 942 718 271 5 50 chr13 46834057 46834278 -73450034 - B3 SINE B2 -5 211 1 7 942 345 221 15 0 chr13 46834278 46834346 -73449966 - B4A SINE B4 -62 230 162 7 942 278 0 54 0 chr13 46834362 46834399 -73449913 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 7 942 886 94 16 0 chr13 46834401 46834528 -73449784 - B1_Mus1 SINE Alu -19 129 1 7 942 770 229 33 90 chr13 46834528 46834630 -73449682 - B4 SINE B4 -202 90 1 7 942 567 289 31 25 chr13 46834996 46835159 -73449153 - RSINE1 SINE B4 0 165 2 7 942 672 282 74 13 chr13 46835166 46835318 -73448994 - B4A SINE B4 0 292 129 7 942 315 0 0 0 chr13 46835318 46835353 -73448959 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 942 672 282 74 13 chr13 46835353 46835430 -73448882 - B4A SINE B4 -164 128 50 7 942 301 270 81 99 chr13 46835440 46835457 -73448855 - PB1D10 SINE Alu 0 117 9 7 942 307 269 85 11 chr13 46835457 46835551 -73448761 - ID_B1 SINE B4 -34 190 90 7 942 504 0 0 0 chr13 46836800 46836856 -73447456 + (TC)n Simple_repeat Simple_repeat 2 57 0 7 942 351 0 0 0 chr13 46836856 46836894 -73447418 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 942 276 193 25 0 chr13 46836894 46837013 -73447299 + CT-rich Low_complexity Low_complexity 2 123 0 7 942 1439 18 0 0 chr13 46837105 46837271 -73447041 + B2_Mm1a SINE B2 1 166 -27 7 942 633 316 171 55 chr13 46837267 46837396 -73446916 + MLT1F LTR MaLR 12 140 -429 7 942 1400 75 0 55 chr13 46837396 46837595 -73446717 - B2_Mm2 SINE B2 -6 189 2 7 942 2570 47 18 45 chr13 46837596 46837928 -73446384 - ORR1A2 LTR MaLR -4 323 1 7 942 685 302 157 26 chr13 46837928 46838234 -73446078 + MLT1F LTR MaLR 131 476 -72 7 942 814 246 28 33 chr13 46838229 46838443 -73445869 + ID_B1 SINE B4 10 222 -2 7 942 305 299 97 49 chr13 46838323 46838467 -73445845 - YREP_Mm Unknown Unknown -1518 294 144 7 942 584 173 24 182 chr13 46838842 46839012 -73445300 + B1_Mus1 SINE Alu 4 146 -2 7 942 793 147 36 29 chr13 46839117 46839257 -73445055 - B1_Mur3 SINE Alu -7 142 2 7 942 537 256 45 0 chr13 46839288 46839421 -73444891 - B1F1 SINE Alu -10 139 1 7 942 670 279 6 6 chr13 46839440 46839602 -73444710 + RSINE1 SINE B4 4 165 0 7 942 393 155 99 5 chr13 46839708 46839794 -73444518 + PB1D9 SINE Alu 15 115 -12 7 942 216 0 0 0 chr13 46839794 46839818 -73444494 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 7 942 217 231 158 42 chr13 46839818 46839829 -73444483 + PB1 SINE Alu 116 123 -4 7 942 2486 165 58 24 chr13 46839899 46840364 -73443948 - Lx5 LINE L1 -11 7039 6559 7 942 2553 186 46 18 chr13 46840464 46840963 -73443349 + RMER5 LTR ERV1 13 525 -9 7 942 488 110 37 0 chr13 46841914 46841996 -73442316 - L1Md_F3 LINE L1 -3 6581 6497 7 942 1142 76 4 199 chr13 46841996 46842150 -73442162 - B2_Mm1a SINE B2 -6 187 78 7 942 333 0 0 0 chr13 46842150 46842187 -73442125 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 7 942 1132 59 0 0 chr13 46842187 46842323 -73441989 - B1_Mus2 SINE Alu -11 136 1 7 942 1142 76 4 199 chr13 46842323 46842398 -73441914 - B2_Mm1a SINE B2 -116 77 3 7 942 759 238 15 150 chr13 46842557 46842820 -73441492 - RLTR15 LTR ERVK -75 284 57 7 942 1227 41 0 0 chr13 46842820 46842965 -73441347 - B1_Mus2 SINE Alu 0 147 3 7 942 759 238 15 150 chr13 46842965 46843027 -73441285 - RLTR15 LTR ERVK -303 56 3 7 942 1354 51 51 6 chr13 46843091 46843267 -73441045 - B2_Mm2 SINE B2 -10 185 2 7 942 214 360 11 43 chr13 46843309 46843402 -73440910 - ID_B1 SINE B4 -127 97 8 7 942 224 257 55 41 chr13 46843333 46843406 -73440906 - B3A SINE B2 -122 76 3 7 942 636 284 34 33 chr13 46843965 46844215 -73440097 - B4 SINE B4 -10 282 47 7 942 1181 76 0 0 chr13 46844272 46844417 -73439895 + B1_Mm SINE Alu 1 145 -2 7 942 180 0 0 0 chr13 46844417 46844437 -73439875 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 942 23 0 0 0 chr13 46845608 46845631 -73438681 + AT_rich Low_complexity Low_complexity 1 23 0 7 942 310 264 0 14 chr13 46846241 46846314 -73437998 - ID4_ SINE ID -10 73 2 7 942 252 239 61 71 chr13 46846324 46846423 -73437889 - B3 SINE B2 -8 208 111 7 942 659 304 31 10 chr13 46846433 46846626 -73437686 - B4A SINE B4 -94 198 2 7 942 1340 89 21 10 chr13 46846661 46846853 -73437459 - B2_Mm2 SINE B2 0 195 2 7 942 251 215 15 44 chr13 46846882 46846950 -73437362 + ID4_ SINE ID 2 67 -16 7 942 302 315 11 43 chr13 46846963 46847056 -73437256 - B4A SINE B4 -157 135 46 7 942 22 0 0 0 chr13 46849049 46849071 -73435241 + AT_rich Low_complexity Low_complexity 1 22 0 7 942 697 256 65 20 chr13 46849086 46849285 -73435027 - B3 SINE B2 -6 210 3 7 942 267 31 0 0 chr13 46849386 46849418 -73434894 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 942 441 309 29 0 chr13 46849426 46849565 -73434747 - RSINE1 SINE B4 -19 146 4 7 942 281 315 78 46 chr13 46849688 46849743 -73434569 - FAM SINE Alu -11 300 246 7 942 1413 75 32 0 chr13 46849743 46849931 -73434381 - B2_Mm2 SINE B2 0 195 2 7 942 466 211 10 21 chr13 46849931 46850028 -73434284 - B1F SINE Alu -46 103 8 7 942 641 215 100 134 chr13 46850502 46850733 -73433579 + ID_B1 SINE B4 2 224 0 7 942 1259 20 7 0 chr13 46850883 46851029 -73433283 + B1_Mus2 SINE Alu 1 147 0 7 942 719 212 14 14 chr13 46851187 46851335 -73432977 - B1_Mur1 SINE Alu -1 148 1 7 942 219 88 0 0 chr13 46851380 46851414 -73432898 + (TTCC)n Simple_repeat Simple_repeat 4 37 0 7 942 761 212 53 0 chr13 46851439 46851559 -73432753 + RSINE1 SINE B4 3 124 -41 7 942 468 0 0 0 chr13 46851559 46851611 -73432701 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 942 761 212 53 0 chr13 46851611 46851641 -73432671 + RSINE1 SINE B4 125 159 -6 7 942 1201 222 106 32 chr13 46851733 46852081 -73432231 + ORR1D1 LTR MaLR 1 374 0 7 942 236 53 26 0 chr13 46852243 46852281 -73432031 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 942 186 43 0 0 chr13 46852678 46852701 -73431611 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 7 942 242 319 112 26 chr13 46853264 46853380 -73430932 + MIR SINE MIR 23 148 -60 7 942 363 297 49 42 chr13 46853491 46853504 -73430808 + ID_B1 SINE B4 80 222 0 7 942 405 250 101 8 chr13 46853504 46853633 -73430679 + B1F SINE Alu 9 149 0 7 942 265 246 77 0 chr13 46853648 46853713 -73430599 + ID4 SINE ID 9 78 -5 7 942 504 246 18 0 chr13 46853875 46853989 -73430323 + PB1D10 SINE Alu 1 116 -1 7 942 277 244 89 13 chr13 46857186 46857265 -73427047 + MTEb LTR MaLR 287 371 -8 7 942 584 252 59 0 chr13 46857378 46857513 -73426799 + RSINE1 SINE B4 23 165 0 7 942 1012 236 19 0 chr13 46857654 46857866 -73426446 - B3 SINE B2 0 216 1 7 942 263 294 21 21 chr13 46858463 46858557 -73425755 + B3 SINE B2 3 96 -120 7 942 198 103 0 0 chr13 46858914 46858943 -73425369 + (TTCTCC)n Simple_repeat Simple_repeat 4 32 0 7 942 614 214 18 0 chr13 46858943 46859055 -73425257 - PB1D9 SINE Alu -6 114 1 7 942 42 71 0 0 chr13 46859061 46859145 -73425167 + AT_rich Low_complexity Low_complexity 1 84 0 7 942 237 136 0 0 chr13 46859150 46859194 -73425118 - Lx4A LINE L1 -2 7056 7013 7 942 359 165 275 0 chr13 46859362 46859453 -73424859 - PB1D9 SINE Alu 0 120 5 7 942 620 215 164 11 chr13 46859707 46859890 -73424422 + B3 SINE B2 1 211 -5 7 942 283 191 179 11 chr13 46860069 46860164 -73424148 - PB1D9 SINE Alu -4 116 6 7 942 1233 107 39 0 chr13 46860461 46860639 -73423673 - B2_Mm2 SINE B2 -9 186 2 7 942 657 268 19 13 chr13 46860689 46860844 -73423468 - RSINE1 SINE B4 0 165 10 7 942 393 252 39 78 chr13 46860893 46861022 -73423290 + B1F1 SINE Alu 6 129 -20 7 942 211 194 71 43 chr13 46861101 46861171 -73423141 - PB1D9 SINE Alu 0 120 49 7 942 1383 69 5 31 chr13 46861250 46861445 -73422867 - B2_Mm2 SINE B2 -4 191 2 7 942 219 139 0 0 chr13 46861546 46861582 -73422730 + (T)n Simple_repeat Simple_repeat 1 36 0 7 942 1088 113 0 13 chr13 46861582 46861734 -73422578 - B1_Mur4 SINE Alu 0 150 1 7 942 751 81 195 0 chr13 46861921 46862044 -73422268 - B1_Mus1 SINE Alu 0 148 2 7 942 493 259 36 42 chr13 46862218 46862267 -73422045 - RSINE1 SINE B4 0 165 122 7 942 255 31 0 0 chr13 46862267 46862299 -73422013 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 942 493 259 36 42 chr13 46862299 46862414 -73421898 - RSINE1 SINE B4 -44 121 2 7 942 877 148 20 20 chr13 46862422 46862611 -73421701 - B3 SINE B2 -3 192 4 7 942 207 0 0 0 chr13 46862618 46862641 -73421671 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 7 942 583 235 8 16 chr13 46863275 46863396 -73420916 + PB1D9 SINE Alu 1 120 0 7 942 222 295 39 0 chr13 46863462 46863540 -73420772 - ID4 SINE ID 0 83 3 7 942 882 293 60 37 chr13 46863620 46863889 -73420423 - B4A SINE B4 0 292 18 7 942 1263 152 10 5 chr13 46863949 46864148 -73420164 + URR1A DNA MER1_type 27 226 0 7 942 507 107 0 0 chr13 46864800 46864875 -73419437 + (GGGA)n Simple_repeat Simple_repeat 4 78 0 7 942 1440 68 16 16 chr13 46865076 46865269 -73419043 + B2_Mm2 SINE B2 2 194 -1 7 942 224 194 0 0 chr13 46865269 46865305 -73419007 + polypurine Low_complexity Low_complexity 100 135 0 7 942 258 346 57 29 chr13 46865422 46865562 -73418750 - B1_Mus1 SINE Alu -2 146 3 7 942 702 240 73 17 chr13 46865562 46865619 -73418693 - ID SINE ID -138 86 20 7 942 224 316 21 21 chr13 46865755 46865852 -73418460 + MIRb SINE MIR 112 208 -60 7 942 393 297 27 55 chr13 46865889 46866035 -73418277 + B1F2 SINE Alu 7 148 -1 7 942 381 190 45 27 chr13 46866035 46866372 -73417940 + (CA)n Simple_repeat Simple_repeat 1 343 0 8 942 244 175 53 0 chr13 46866387 46866444 -73417868 + (CA)n Simple_repeat Simple_repeat 2 61 0 8 942 206 81 27 0 chr13 46867083 46867120 -73417192 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 8 942 383 267 27 100 chr13 46867136 46867286 -73417026 + B1F SINE Alu 1 139 -10 8 942 317 152 212 0 chr13 46867406 46867472 -73416840 + RSINE1 SINE B4 58 137 -28 8 942 229 195 24 0 chr13 46867542 46867583 -73416729 + B1_Mus2 SINE Alu 6 47 -100 8 942 660 209 124 35 chr13 46867785 46867954 -73416358 - B3A SINE B2 0 198 15 8 942 3462 33 2 0 chr13 46868391 46868786 -73415526 + MTA_Mm LTR MaLR 1 396 0 8 942 234 258 81 0 chr13 46869356 46869418 -73414894 - ID4_ SINE ID -16 67 1 8 942 440 35 17 0 chr13 46869657 46869715 -73414597 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 8 942 793 185 30 0 chr13 46869721 46869856 -73414456 - B1_Mur2 SINE Alu -7 142 4 8 942 252 174 0 0 chr13 46869983 46870029 -73414283 - BC1_Mm scRNA scRNA -104 48 3 8 942 308 301 97 0 chr13 46870075 46870178 -73414134 - RSINE1 SINE B4 -38 127 15 8 942 245 244 179 24 chr13 46870213 46870297 -73414015 - PB1 SINE Alu -2 125 29 8 942 311 317 58 64 chr13 46870232 46870404 -73413908 - ID_B1 SINE B4 -52 172 2 8 942 2856 98 10 2 chr13 46870886 46871295 -73413017 + Lx3A LINE L1 5930 6341 -640 8 942 958 270 14 10 chr13 46871525 46871753 -73412559 + ID_B1 SINE B4 7 225 -67 8 942 613 188 194 0 chr13 46871899 46872085 -73412227 + URR1B DNA MER1_type 1 222 -3 8 942 541 208 6 6 chr13 46872799 46872978 -73411334 + (TG)n Simple_repeat Simple_repeat 2 180 0 8 942 3367 38 5 2 chr13 46873247 46873642 -73410670 + MTA_Mm LTR MaLR 1 396 0 8 942 735 239 0 7 chr13 46873827 46873970 -73410342 - B1_Mur1 SINE Alu -1 148 7 8 942 495 292 23 0 chr13 46874123 46874253 -73410059 - RSINE1 SINE B4 -31 134 2 8 942 555 109 16 16 chr13 46876187 46876308 -73408004 + (TCTG)n Simple_repeat Simple_repeat 4 124 0 8 942 279 250 14 42 chr13 46876311 46876382 -73407930 - RSINE1 SINE B4 -85 80 12 8 942 441 76 0 0 chr13 46876993 46877059 -73407253 + (ATG)n Simple_repeat Simple_repeat 2 67 0 8 942 461 172 0 11 chr13 46877070 46877164 -73407148 + CT-rich Low_complexity Low_complexity 2 94 0 8 942 705 230 0 15 chr13 46877185 46877322 -73406990 - B1F2 SINE Alu -12 137 3 8 942 1720 28 42 5 chr13 46877334 46877551 -73406761 - L1Md_F3 LINE L1 0 6584 6360 8 942 227 262 0 90 chr13 46878000 46878067 -73406245 - tRNA-Ala-GCA tRNA tRNA -5 70 10 8 942 466 248 109 29 chr13 46878164 46878301 -73406011 - B1_Mur1 SINE Alu -1 148 1 8 942 864 187 176 27 chr13 46878372 46878559 -73405753 + B3 SINE B2 2 216 0 8 942 203 304 0 42 chr13 46878772 46878844 -73405468 - MIR3 SINE MIR -133 75 7 8 942 219 316 47 79 chr13 46879366 46879386 -73404926 - B1_Mm SINE Alu -23 124 3 8 942 404 217 179 0 chr13 46879386 46879492 -73404820 - ID_B1 SINE B4 -16 208 84 8 942 1224 69 121 0 chr13 46879575 46879748 -73404564 - B2_Mm2 SINE B2 -1 194 1 8 942 1189 27 0 7 chr13 46879787 46879937 -73404375 + L1Md_F2 LINE L1 6422 6570 -12 8 942 823 273 20 5 chr13 46880260 46880469 -73403843 - B3A SINE B2 -5 211 2 8 942 32 0 0 0 chr13 46880476 46880508 -73403804 + AT_rich Low_complexity Low_complexity 1 32 0 8 942 1078 69 0 65 chr13 46880890 46881044 -73403268 + B1_Mm SINE Alu 1 144 -3 8 942 189 74 0 0 chr13 46881048 46881075 -73403237 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 8 942 241 85 0 0 chr13 46881136 46881183 -73403129 + L1_Mus4 LINE L1 6588 6634 -2 8 942 1250 113 11 0 chr13 46881190 46881367 -73402945 + B2_Mm1t SINE B2 1 179 -14 8 942 351 99 361 17 chr13 46881413 46881521 -73402791 + B2_Mm2 SINE B2 47 191 -4 8 942 1518 182 71 36 chr13 46881530 46881871 -73402441 + ORR1A4 LTR MaLR 9 378 0 8 942 473 212 43 26 chr13 46882384 46882500 -73401812 - PB1D9 SINE Alu -1 119 2 8 942 510 61 0 0 chr13 46882517 46882583 -73401729 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 8 942 354 98 0 0 chr13 46882608 46882659 -73401653 + (CCCA)n Simple_repeat Simple_repeat 2 52 0 8 942 718 44 0 11 chr13 46882672 46882764 -73401548 + B1_Mus2 SINE Alu 57 147 0 8 942 539 264 95 0 chr13 46882853 46883001 -73401311 + RSINE1 SINE B4 3 164 -1 8 942 588 111 0 0 chr13 46883013 46883112 -73401200 + (CA)n Simple_repeat Simple_repeat 2 100 0 8 942 1322 67 84 0 chr13 46884286 46884464 -73399848 + B2_Mm2 SINE B2 2 194 -1 8 942 324 0 0 0 chr13 46884650 46884686 -73399626 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 942 1330 71 28 0 chr13 46884815 46884997 -73399315 + B2_Mm2 SINE B2 9 195 0 8 942 282 351 32 0 chr13 46885156 46885250 -73399062 + B3 SINE B2 105 201 -15 8 942 592 241 8 0 chr13 46885972 46886105 -73398207 + B1F SINE Alu 1 134 -15 8 942 254 327 45 9 chr13 46886120 46886231 -73398081 + Lx8 LINE L1 7212 7326 -147 8 942 938 65 56 0 chr13 46887053 46887394 -73396918 + (TCTA)n Simple_repeat Simple_repeat 1 359 0 8 942 364 315 38 18 chr13 46887460 46887569 -73396743 - B1_Mur3 SINE Alu -32 117 3 8 942 204 40 0 0 chr13 46887616 46887641 -73396671 + (TATTG)n Simple_repeat Simple_repeat 2 26 0 8 942 525 289 70 0 chr13 46887649 46887791 -73396521 - RSINE1 SINE B4 -10 155 4 8 942 1052 241 186 9 chr13 46888111 46888434 -73395878 - MTD LTR MaLR -14 405 26 8 942 533 202 56 88 chr13 46888454 46888579 -73395733 + B1_Mur2 SINE Alu 2 122 -27 8 942 6106 55 0 1 chr13 46889630 46890380 -73393932 - L1Md_F2 LINE L1 0 6582 5834 8 942 279 54 0 0 chr13 46890937 46890974 -73393338 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 8 942 460 204 42 14 chr13 46890979 46891095 -73393217 - PB1D7 SINE Alu 0 120 5 8 942 651 273 15 46 chr13 46891126 46891322 -73392990 - B3A SINE B2 -7 191 2 8 942 336 265 72 0 chr13 46891428 46891511 -73392801 - B1F SINE Alu -60 89 1 8 942 500 237 69 44 chr13 46891697 46891856 -73392456 - RSINE1 SINE B4 -1 164 2 8 942 375 23 0 0 chr13 46892031 46892075 -73392237 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 942 1201 75 0 0 chr13 46892166 46892313 -73391999 - B1_Mm SINE Alu 0 147 1 8 942 23 0 0 0 chr13 46893207 46893230 -73391082 + AT_rich Low_complexity Low_complexity 1 23 0 8 942 587 199 107 0 chr13 46893234 46893365 -73390947 - B1_Mur2 SINE Alu -1 148 4 8 942 288 0 0 0 chr13 46893598 46893630 -73390682 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 942 853 240 71 10 chr13 46895073 46895257 -73389055 + ID_B1 SINE B4 14 210 -14 8 942 417 86 0 0 chr13 46895257 46895315 -73388997 + (CAAT)n Simple_repeat Simple_repeat 4 61 0 8 942 853 240 71 10 chr13 46895315 46895328 -73388984 + ID_B1 SINE B4 211 223 -1 8 942 309 51 0 0 chr13 46895370 46895409 -73388903 + (CAAT)n Simple_repeat Simple_repeat 3 41 0 8 942 983 185 40 15 chr13 46895544 46895742 -73388570 - B3 SINE B2 -6 210 8 8 942 322 281 109 22 chr13 46896099 46896237 -73388075 - RSINE1 SINE B4 0 165 16 8 942 318 302 45 85 chr13 46896322 46896333 -73387979 - B4 SINE B4 -59 233 171 8 942 793 169 15 0 chr13 46896333 46896469 -73387843 - B1_Mus2 SINE Alu -5 142 5 8 942 432 178 18 98 chr13 46896372 46896484 -73387828 - MT2B LTR ERVL -344 257 155 8 942 318 302 45 85 chr13 46896484 46896499 -73387813 - B4 SINE B4 -59 170 64 8 942 424 246 6 121 chr13 46896994 46897043 -73387269 + MT2B LTR ERVL 125 155 -446 8 942 701 188 0 8 chr13 46897043 46897161 -73387151 + B1_Mur1 SINE Alu 3 119 -30 8 942 433 308 0 37 chr13 46897161 46897177 -73387135 + ID_B1 SINE B4 84 212 -12 8 942 603 0 0 0 chr13 46897186 46897253 -73387059 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 8 942 1168 110 8 0 chr13 46898642 46899000 -73385312 + (GAAA)n Simple_repeat Simple_repeat 1 361 0 8 942 215 170 21 0 chr13 46899005 46899052 -73385260 + GA-rich Low_complexity Low_complexity 1 48 0 8 942 43 20 0 0 chr13 46899980 46900030 -73384282 + AT_rich Low_complexity Low_complexity 1 50 0 8 942 259 108 0 0 chr13 46900108 46900145 -73384167 - tRNA-Ala-GCY_ tRNA tRNA -11 64 28 8 942 255 250 29 14 chr13 46900145 46900177 -73384135 - ID4_ SINE ID -13 70 1 8 942 279 312 0 0 chr13 46900572 46900636 -73383676 - B4 SINE B4 -1 291 228 8 942 566 283 40 33 chr13 46900667 46900817 -73383495 - RSINE1 SINE B4 -4 161 11 8 942 788 242 84 0 chr13 46900842 46901032 -73383280 - B4A SINE B4 -84 208 3 8 942 26 0 0 0 chr13 46901243 46901269 -73383043 + AT_rich Low_complexity Low_complexity 1 26 0 8 942 2393 185 72 17 chr13 46901333 46901806 -73382506 + RMER5 LTR ERV1 1 499 -35 8 942 477 0 0 0 chr13 46901808 46901861 -73382451 + (TAAAA)n Simple_repeat Simple_repeat 5 57 0 8 942 338 227 13 13 chr13 46901972 46902048 -73382264 - ID4_ SINE ID -2 81 6 8 942 1156 56 0 0 chr13 46902296 46902440 -73381872 + B2_Mm2 SINE B2 2 145 -50 8 942 522 31 0 0 chr13 46902440 46902504 -73381808 + (TG)n Simple_repeat Simple_repeat 2 65 0 8 942 979 147 85 0 chr13 46902504 46902536 -73381776 + B2_Mm1t SINE B2 147 192 -1 8 942 609 283 146 36 chr13 46902838 46903091 -73381221 - B4A SINE B4 -5 287 7 8 942 415 274 89 67 chr13 46904841 46905021 -73379291 + B4 SINE B4 2 185 -107 8 942 545 185 0 6 chr13 46905030 46905204 -73379108 + (CA)n Simple_repeat Simple_repeat 2 174 0 9 942 773 308 32 72 chr13 46905549 46905923 -73378389 + ORR1E LTR MaLR 1 359 0 9 942 541 264 132 0 chr13 46906320 46906449 -73377863 + RSINE1 SINE B4 3 148 -17 9 942 594 0 0 0 chr13 46906458 46906524 -73377788 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 9 942 347 208 167 181 chr13 46906737 46907025 -73377287 - RLTR21 LTR ERVK -9 1563 1280 9 942 497 273 0 9 chr13 46906991 46907102 -73377210 - ID_B1 SINE B4 -33 191 82 9 942 336 335 92 20 chr13 46907137 46907332 -73376980 + Charlie1 DNA MER1_type 3 211 -2570 9 942 597 148 27 41 chr13 46907438 46907558 -73376754 + B1_Mur3 SINE Alu 2 131 -18 9 942 217 278 87 22 chr13 46908811 46908903 -73375409 - L2a LINE L2 -37 3389 3292 9 942 207 0 0 0 chr13 46909112 46909135 -73375177 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 9 942 934 144 191 11 chr13 46909283 46909472 -73374840 + URR1A DNA MER1_type 4 226 0 9 942 372 296 207 67 chr13 46911084 46911340 -73372972 - B4A SINE B4 0 292 1 9 942 375 265 171 44 chr13 46913027 46913185 -73371127 + B3A SINE B2 1 178 -20 9 942 201 236 0 0 chr13 46913194 46913249 -73371063 + (CAGAGA)n Simple_repeat Simple_repeat 6 60 0 9 942 25 0 0 0 chr13 46913249 46913274 -73371038 + AT_rich Low_complexity Low_complexity 1 25 0 9 942 1273 273 21 0 chr13 46913430 46913763 -73370549 + MMAR1 DNA Mariner 25 364 -922 9 942 236 329 0 0 chr13 46913903 46913973 -73370339 + MMAR1 DNA Mariner 418 487 -799 9 942 279 0 0 0 chr13 46914214 46914245 -73370067 + (TTTC)n Simple_repeat Simple_repeat 1 31 0 9 942 652 185 14 7 chr13 46914245 46914392 -73369920 + CT-rich Low_complexity Low_complexity 1 148 0 9 942 294 283 141 0 chr13 46914392 46914491 -73369821 - BC1_Mm scRNA scRNA -37 115 3 9 942 345 298 96 0 chr13 46914498 46914602 -73369710 - B1F SINE Alu 0 149 36 9 942 199 327 36 36 chr13 46915165 46915276 -73369036 - MIR SINE MIR -34 228 118 9 942 1078 141 141 5 chr13 46915703 46915902 -73368410 - URR1A DNA MER1_type 0 226 1 9 942 451 299 87 126 chr13 46916047 46916483 -73367829 - MLT1D LTR MaLR -18 487 69 9 942 510 342 38 38 chr13 46917121 46917277 -73367035 + B3 SINE B2 2 161 -55 9 942 315 0 0 0 chr13 46917277 46917312 -73367000 + (CAAT)n Simple_repeat Simple_repeat 3 37 0 9 942 510 342 38 38 chr13 46917312 46917365 -73366947 + B3 SINE B2 162 211 -5 9 942 590 292 84 19 chr13 46918019 46918232 -73366080 - MIR SINE MIR -4 258 32 9 942 324 103 0 0 chr13 46918244 46918302 -73366010 + (CA)n Simple_repeat Simple_repeat 2 59 0 9 942 353 292 17 34 chr13 46918442 46918559 -73365753 - Tigger5 DNA MER2_type -1 2405 2291 9 942 287 299 117 22 chr13 46918733 46918870 -73365442 + ORR1E LTR MaLR 44 193 -166 9 942 545 268 53 97 chr13 46919661 46919888 -73364424 - B4A SINE B4 -75 217 1 9 942 228 192 96 0 chr13 46920279 46920331 -73363981 - PB1D10 SINE Alu -13 104 48 9 942 508 177 328 8 chr13 46920293 46920418 -73363894 - ID_B1 SINE B4 -58 166 2 9 942 279 121 299 15 chr13 46920450 46920517 -73363795 + B1_Mus1 SINE Alu 1 86 -62 9 942 285 328 34 8 chr13 46920991 46921108 -73363204 + L2c LINE L2 3262 3381 -6 9 942 27 29 0 0 chr13 46922613 46922647 -73361665 + AT_rich Low_complexity Low_complexity 1 34 0 9 942 777 117 0 0 chr13 46922782 46922910 -73361402 + (TG)n Simple_repeat Simple_repeat 1 128 0 9 942 336 132 19 0 chr13 46922911 46922964 -73361348 - HAL1-3A_ME LINE L1 -828 2030 1977 9 942 414 208 106 149 chr13 46922964 46923105 -73361207 - RSINE1 SINE B4 0 165 31 9 943 1451 60 6 0 chr13 46923896 46924079 -73360233 + B2_Mm1a SINE B2 2 185 -8 9 943 254 29 0 28 chr13 46924754 46924790 -73359522 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 9 943 722 111 171 0 chr13 46924794 46924911 -73359401 - B1_Mus1 SINE Alu -6 142 6 9 943 181 376 44 44 chr13 46924925 46925039 -73359273 - MER5B DNA MER1_type -51 127 14 9 943 472 287 123 0 chr13 46925140 46925262 -73359050 - B1F1 SINE Alu 0 149 13 9 943 1120 210 10 14 chr13 46925278 46925486 -73358826 - B3 SINE B2 -1 215 9 9 943 1221 68 0 0 chr13 46925754 46925902 -73358410 + B1_Mus1 SINE Alu 1 148 0 9 943 1426 65 16 11 chr13 46925925 46926113 -73358199 + B2_Mm2 SINE B2 3 191 -4 9 943 806 270 93 26 chr13 46926674 46926944 -73357368 - B4 SINE B4 0 292 5 9 943 1792 133 78 62 chr13 46926954 46927275 -73357037 + ORR1A3 LTR MaLR 1 326 0 9 943 27 0 0 0 chr13 46927829 46927856 -73356456 + AT_rich Low_complexity Low_complexity 1 27 0 9 943 288 180 208 12 chr13 46927861 46927944 -73356368 + ID4_ SINE ID 9 104 -48 9 943 321 303 0 0 chr13 46927976 46928042 -73356270 - ID SINE ID -150 74 9 9 943 491 277 0 0 chr13 46928222 46928316 -73355996 - B3A SINE B2 -32 166 73 9 943 22 0 0 0 chr13 46928359 46928381 -73355931 + AT_rich Low_complexity Low_complexity 1 22 0 9 943 859 231 20 30 chr13 46928430 46928631 -73355681 - B3 SINE B2 -5 211 13 9 943 1227 261 58 22 chr13 46929173 46929533 -73354779 + MTE2b LTR MaLR 5 377 -2 9 943 331 316 51 8 chr13 46929816 46929934 -73354378 + L2c LINE L2 3259 3381 -6 9 943 1120 168 39 0 chr13 46930246 46930449 -73353863 + B3 SINE B2 1 211 -5 9 943 1603 199 58 33 chr13 46931455 46931819 -73352493 + MTEb LTR MaLR 7 379 0 9 943 319 273 15 97 chr13 46931820 46931954 -73352358 + MLT1A1 LTR MaLR 8 130 -278 9 943 213 309 0 0 chr13 46932523 46932698 -73351614 + (CATG)n Simple_repeat Simple_repeat 1 175 0 9 943 596 260 85 20 chr13 46932716 46932869 -73351443 - RSINE1 SINE B4 -2 163 1 9 943 605 261 38 0 chr13 46933297 46933454 -73350858 - RSINE1 SINE B4 -1 164 2 9 943 1382 67 45 0 chr13 46933681 46933860 -73350452 - B2_Mm2 SINE B2 -8 187 1 9 943 338 311 56 0 chr13 46934142 46934232 -73350080 + RSINE1 SINE B4 14 108 -57 9 943 261 0 0 0 chr13 46934247 46934276 -73350036 + (TA)n Simple_repeat Simple_repeat 2 30 0 9 943 218 81 27 0 chr13 46934328 46934365 -73349947 + (TA)n Simple_repeat Simple_repeat 2 39 0 9 943 574 114 227 42 chr13 46934366 46934485 -73349827 - B1_Mur4 SINE Alu -5 142 2 9 943 324 270 27 0 chr13 46935483 46935557 -73348755 - ID4 SINE ID -4 79 4 9 943 486 0 0 0 chr13 46935670 46935724 -73348588 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 943 186 318 31 16 chr13 46938349 46938413 -73345899 + MIRc SINE MIR 111 175 -93 9 943 739 253 27 32 chr13 46938630 46938818 -73345494 + ID_B1 SINE B4 30 216 -8 9 943 369 265 39 10 chr13 46939047 46939150 -73345162 + Tigger13a DNA MER2_type 154 259 -512 9 943 530 179 122 9 chr13 46939161 46939268 -73345044 + RSINE1 SINE B4 3 121 -44 9 943 261 0 0 0 chr13 46939268 46939297 -73345015 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 943 22 35 0 0 chr13 46939328 46939357 -73344955 + AT_rich Low_complexity Low_complexity 1 29 0 9 943 780 204 87 22 chr13 46940318 46940503 -73343809 - B3A SINE B2 0 198 2 9 943 358 272 55 16 chr13 46942775 46942902 -73341410 - L1MA7 LINE L1 -2 6289 6158 9 943 1199 57 96 17 chr13 46943071 46943219 -73341093 + B2_Mm1t SINE B2 2 160 -33 9 943 243 0 0 0 chr13 46943219 46943246 -73341066 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 9 943 1199 57 96 17 chr13 46943246 46943275 -73341037 + B2_Mm1t SINE B2 161 193 0 9 943 514 243 0 79 chr13 46943357 46943501 -73340811 - B1F1 SINE Alu -13 136 5 9 943 198 91 0 0 chr13 46943809 46943842 -73340470 + (G)n Simple_repeat Simple_repeat 1 33 0 9 943 234 0 0 0 chr13 46944034 46944060 -73340252 + (CACCC)n Simple_repeat Simple_repeat 3 28 0 9 943 326 211 42 14 chr13 46945070 46945142 -73339170 - Charlie12 DNA MER1_type -2797 76 3 9 943 223 350 49 20 chr13 46945165 46945267 -73339045 + L2c LINE L2 3277 3381 -6 9 943 644 248 99 40 chr13 46945323 46945546 -73338766 + B4A SINE B4 2 237 -55 9 943 260 206 48 0 chr13 46945568 46945631 -73338681 + CT-rich Low_complexity Low_complexity 2 67 0 9 943 752 32 11 0 chr13 46945636 46945731 -73338581 + (CA)n Simple_repeat Simple_repeat 1 96 0 9 943 189 369 89 16 chr13 46945952 46946076 -73338236 - L3b LINE CR1 -27 455 323 9 943 537 254 0 0 chr13 46946921 46947035 -73337277 + B1F SINE Alu 2 115 -34 9 943 506 175 9 0 chr13 46947079 46947193 -73337119 + GA-rich Low_complexity Low_complexity 2 116 0 9 943 416 279 9 37 chr13 46947737 46947845 -73336467 + PB1D10 SINE Alu 3 107 -10 9 943 776 177 106 69 chr13 46947932 46948120 -73336192 - B3A SINE B2 -3 195 1 9 943 223 254 59 76 chr13 46948304 46948423 -73335889 + PB1D10 SINE Alu 1 117 0 9 943 180 111 0 0 chr13 46948698 46948725 -73335587 + (TGG)n Simple_repeat Simple_repeat 1 27 0 9 943 411 309 19 97 chr13 46948731 46948885 -73335427 - RSINE1 SINE B4 0 165 24 9 943 2476 149 32 5 chr13 46949100 46949510 -73334802 + MTC LTR MaLR 1 421 0 9 943 24 32 0 0 chr13 46950394 46950425 -73333887 + AT_rich Low_complexity Low_complexity 1 31 0 9 943 1129 72 13 19 chr13 46951896 46952053 -73332259 + B2_Mm1t SINE B2 24 179 -14 9 943 513 88 310 26 chr13 46952100 46952216 -73332096 + B2_Mm2 SINE B2 47 195 0 9 943 238 36 0 0 chr13 46952216 46952244 -73332068 + (GGGAGA)n Simple_repeat Simple_repeat 2 29 0 9 943 846 113 0 0 chr13 46952244 46952377 -73331935 + (GGAA)n Simple_repeat Simple_repeat 4 136 0 9 943 1489 43 5 11 chr13 46952445 46952632 -73331680 + B2_Mm2 SINE B2 1 186 -9 1 943 261 278 182 0 chr13 46952871 46952997 -73331315 + MLT1I LTR MaLR 210 358 -53 1 943 245 225 55 27 chr13 46952964 46953037 -73331275 + LTR86B2 LTR ERVL 103 177 -310 1 943 247 278 28 0 chr13 46953259 46953331 -73330981 - ID4 SINE ID -8 75 2 1 943 411 306 106 25 chr13 46953771 46954016 -73330296 - MER33 DNA MER1_type -23 301 37 1 943 489 250 19 0 chr13 46954175 46954279 -73330033 - PB1D10 SINE Alu 0 117 12 1 943 260 258 0 0 chr13 46954343 46954409 -73329903 + tRNA-Ala-GCA tRNA tRNA 2 67 -8 1 943 935 290 101 66 chr13 46955102 46955619 -73328693 - L1MC2 LINE L1 -379 5965 5422 1 943 243 0 0 0 chr13 46955619 46955646 -73328666 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 943 1269 108 21 11 chr13 46955649 46955677 -73328635 - B2_Mm2 SINE B2 -6 189 159 1 943 321 26 0 0 chr13 46955677 46955715 -73328597 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1 943 1269 108 21 11 chr13 46955715 46955873 -73328439 - B2_Mm2 SINE B2 -37 158 1 1 943 935 290 101 66 chr13 46955873 46956001 -73328311 - L1MC2 LINE L1 -923 5421 5292 1 943 558 0 0 0 chr13 46956001 46956063 -73328249 + (TTTC)n Simple_repeat Simple_repeat 4 65 0 1 943 935 294 155 56 chr13 46956063 46956361 -73327951 - L1MC2 LINE L1 -845 5301 4955 1 943 195 42 0 0 chr13 46956567 46956591 -73327721 + (T)n Simple_repeat Simple_repeat 1 24 0 1 943 254 296 70 0 chr13 46956740 46956811 -73327501 - ID4_ SINE ID -3 80 5 1 943 582 236 8 30 chr13 46956994 46957125 -73327187 - B1F2 SINE Alu -1 148 21 1 943 263 171 314 0 chr13 46957133 46957203 -73327109 - B1F1 SINE Alu -51 98 7 1 943 333 118 0 0 chr13 46957563 46957614 -73326698 + (TATG)n Simple_repeat Simple_repeat 1 51 0 1 943 512 116 12 0 chr13 46957615 46957701 -73326611 + (TCCA)n Simple_repeat Simple_repeat 3 89 0 1 943 264 235 78 100 chr13 46957720 46957810 -73326502 - RSINE1 SINE B4 -25 140 53 1 943 2131 175 80 3 chr13 46959438 46959827 -73324485 - MTD LTR MaLR 0 419 1 1 943 928 279 19 5 chr13 46960524 46960733 -73323579 - ID_B1 SINE B4 -2 222 11 1 943 262 279 0 81 chr13 46960995 46961081 -73323231 - ID2 SINE ID 0 83 5 1 943 437 252 27 103 chr13 46961396 46961542 -73322770 + B1_Mus2 SINE Alu 6 140 -7 1 943 282 95 0 0 chr13 46962077 46962119 -73322193 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 1 943 533 234 198 11 chr13 46962212 46962389 -73321923 - MER2 DNA MER2_type -2 343 134 1 943 583 292 70 11 chr13 46963269 46963456 -73320856 + MER57E2 LTR ERV1 205 402 0 1 943 507 236 0 0 chr13 46963963 46964103 -73320209 + (TG)n Simple_repeat Simple_repeat 1 140 0 1 943 590 155 117 9 chr13 46964149 46964260 -73320052 - RSINE1 SINE B4 -39 126 4 1 943 1024 189 89 60 chr13 46965501 46965845 -73318467 + RMER16 LTR ERVK 1 526 -7 1 943 282 252 60 26 chr13 46966707 46966790 -73317522 + PB1 SINE Alu 1 77 -50 1 943 825 150 13 52 chr13 46967133 46967288 -73317024 + B1_Mur4 SINE Alu 1 149 -1 1 943 432 86 0 0 chr13 46967297 46967367 -73316945 + (GGAA)n Simple_repeat Simple_repeat 4 73 0 1 943 268 330 82 33 chr13 46967455 46967577 -73316735 + MIR SINE MIR 8 135 -127 1 943 180 0 0 0 chr13 46968071 46968091 -73316221 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 943 412 305 14 41 chr13 46969140 46969287 -73315025 + RSINE1 SINE B4 5 147 -18 1 943 258 32 0 0 chr13 46969288 46969319 -73314993 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 943 1418 92 0 10 chr13 46969405 46969602 -73314710 - B2_Mm2 SINE B2 0 195 1 1 943 2666 264 113 51 chr13 46969929 46970838 -73313474 + RCHARR1 DNA MER1_type 7 972 -2 1 943 216 0 0 0 chr13 46971169 46971193 -73313119 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 943 249 224 0 0 chr13 46971251 46971309 -73313003 + (TATATG)n Simple_repeat Simple_repeat 6 63 0 1 943 225 0 0 0 chr13 46971361 46971386 -73312926 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 943 346 291 11 11 chr13 46971808 46971895 -73312417 - B3 SINE B2 -129 87 1 1 943 681 251 67 147 chr13 46972787 46972880 -73311432 + B4 SINE B4 5 84 -208 1 943 696 279 0 30 chr13 46972880 46973046 -73311266 + RSINE1 SINE B4 3 163 -2 1 943 681 251 67 147 chr13 46973046 46973265 -73311047 + B4 SINE B4 85 292 0 1 943 226 333 0 0 chr13 46973275 46973335 -73310977 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 943 512 160 34 0 chr13 46973457 46973576 -73310736 + GA-rich Low_complexity Low_complexity 2 124 0 1 943 309 296 0 36 chr13 46975245 46975264 -73309048 + B4A SINE B4 70 85 -207 1 943 533 255 0 0 chr13 46975264 46975362 -73308950 + B1F1 SINE Alu 1 98 -51 1 943 315 0 0 0 chr13 46975885 46975920 -73308392 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 943 805 186 7 28 chr13 46976977 46977121 -73307191 + B1_Mus1 SINE Alu 6 146 -2 1 943 332 337 11 0 chr13 46977306 46977398 -73306914 + RSINE1 SINE B4 1 93 -72 1 943 204 40 0 0 chr13 46977583 46977608 -73306704 + (CAT)n Simple_repeat Simple_repeat 1 25 0 1 943 352 235 107 10 chr13 46977609 46977712 -73306600 - PB1D10 SINE Alu -2 115 3 1 943 635 189 14 83 chr13 46977841 46977947 -73306365 - ORR1E LTR MaLR -225 134 38 1 943 1644 201 78 17 chr13 46977947 46978306 -73306006 - ORR1C2 LTR MaLR -3 381 1 1 943 635 189 14 83 chr13 46978306 46978343 -73305969 - ORR1E LTR MaLR -322 37 1 1 943 542 276 69 39 chr13 46979827 46980031 -73304281 - B3 SINE B2 -3 213 4 1 943 336 319 24 30 chr13 46980357 46980525 -73303787 + MER5A DNA MER1_type 15 181 -8 1 943 1158 154 11 5 chr13 46981313 46981502 -73302810 + B2_Mm2 SINE B2 1 190 -5 1 943 256 290 0 0 chr13 46981506 46981568 -73302744 + PB1D7 SINE Alu 1 62 -58 1 943 238 170 22 0 chr13 46981682 46981734 -73302578 + PB1D10 SINE Alu 57 112 -15 1 943 508 290 80 40 chr13 46982401 46982552 -73301760 + RSINE1 SINE B4 9 165 0 1 943 655 224 5 9 chr13 46982554 46982779 -73301533 + (CATA)n Simple_repeat Simple_repeat 1 224 0 1 943 255 276 0 73 chr13 46983633 46983715 -73300597 - ID SINE ID -147 77 2 1 943 180 0 0 0 chr13 46984121 46984141 -73300171 + (G)n Simple_repeat Simple_repeat 1 20 0 1 943 351 342 63 105 chr13 46984841 46985174 -73299138 + LTR48B LTR ERV1 8 326 -318 1 943 510 99 28 56 chr13 46985196 46985383 -73298929 + (CA)n Simple_repeat Simple_repeat 1 186 -29 1 943 510 99 28 56 chr13 46985390 46985418 -73298894 + (CA)n Simple_repeat Simple_repeat 187 215 0 1 943 407 224 164 17 chr13 46985418 46985587 -73298725 + LTR48 LTR ERV1 580 774 -13 1 943 657 237 50 0 chr13 46985654 46985793 -73298519 + RSINE1 SINE B4 1 146 -19 1 943 320 194 144 51 chr13 46985813 46985929 -73298383 + PB1D10 SINE Alu 5 127 -22 1 943 273 265 14 14 chr13 46986194 46986263 -73298049 + B4A SINE B4 81 149 -143 1 943 467 238 10 29 chr13 46986204 46986308 -73298004 + PB1D7 SINE Alu 7 108 -12 1 943 189 0 0 0 chr13 46986309 46986330 -73297982 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 1 943 330 67 0 0 chr13 46986510 46986555 -73297757 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 943 216 0 0 0 chr13 46986841 46986865 -73297447 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 1 943 195 196 39 98 chr13 46986895 46986946 -73297366 + L3 LINE CR1 737 784 -3705 1 943 237 289 104 97 chr13 46986967 46987101 -73297211 + B3 SINE B2 57 191 -25 1 943 360 207 37 0 chr13 46988373 46988455 -73295857 - RMER15 LTR ERVL -69 506 422 1 943 272 154 15 44 chr13 46988873 46988941 -73295371 + Lx6 LINE L1 7380 7445 -15 1 943 570 294 7 14 chr13 46988958 46989103 -73295209 + B3A SINE B2 27 170 -28 1 943 540 0 0 0 chr13 46989104 46989164 -73295148 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 943 369 62 0 0 chr13 46989164 46989211 -73295101 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 943 372 244 15 5 chr13 46989581 46989700 -73294612 + B3A SINE B2 1 123 -72 1 943 303 130 0 0 chr13 46989716 46989770 -73294542 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 943 779 167 7 27 chr13 46989862 46990010 -73294302 + ID_B1 SINE B4 80 224 0 1 943 466 308 31 25 chr13 46990044 46990207 -73294105 - MER5A1 DNA MER1_type -2 164 1 1 943 367 228 213 84 chr13 46990886 46991105 -73293207 + B4 SINE B4 1 253 -39 1 943 357 24 0 0 chr13 46991105 46991147 -73293165 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 943 367 228 213 84 chr13 46991147 46991176 -73293136 + B4 SINE B4 254 281 -11 1 943 286 286 0 0 chr13 46991149 46991205 -73293107 + RSINE1 SINE B4 110 165 0 1 943 366 23 0 0 chr13 46991382 46991425 -73292887 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 943 248 338 32 32 chr13 46991528 46991684 -73292628 - RMER15 LTR ERVL -68 507 352 1 943 514 235 7 75 chr13 46992424 46992571 -73291741 - B1F SINE Alu -12 137 1 1 943 807 31 0 0 chr13 46993023 46993119 -73291193 + B1_Mus2 SINE Alu 45 140 -7 1 943 717 12 0 0 chr13 46993119 46993201 -73291111 + (GAGAA)n Simple_repeat Simple_repeat 4 85 0 1 943 315 0 0 0 chr13 46993326 46993361 -73290951 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 943 566 267 64 73 chr13 46994209 46994258 -73290054 - B3 SINE B2 0 216 167 1 943 315 0 0 0 chr13 46994258 46994293 -73290019 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 943 576 267 64 73 chr13 46994293 46994461 -73289851 - B3A SINE B2 -50 166 1 1 943 386 281 0 0 chr13 46994583 46994665 -73289647 - PB1D7 SINE Alu 0 120 39 1 943 183 129 0 0 chr13 46994696 46994727 -73289585 + (A)n Simple_repeat Simple_repeat 1 31 0 1 943 505 205 180 9 chr13 46994834 46994991 -73289321 + B3A SINE B2 1 174 -19 1 943 363 160 52 5 chr13 46995636 46995723 -73288589 - PB1D7 SINE Alu -20 100 8 1 943 648 243 39 33 chr13 46996620 46996773 -73287539 + B3A SINE B2 7 160 -38 1 943 324 0 0 0 chr13 46996901 46996937 -73287375 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 943 1206 41 7 0 chr13 46996975 46997121 -73287191 - B1_Mus1 SINE Alu 0 148 2 1 943 300 308 125 25 chr13 46997582 46997702 -73286610 + ID_B1 SINE B4 93 224 0 1 943 729 227 0 0 chr13 46997705 46997855 -73286457 + B1_Mur4 SINE Alu 1 150 0 1 943 558 101 38 0 chr13 46997959 46998038 -73286274 + U6 snRNA snRNA 3 84 -23 1 943 450 248 189 38 chr13 46998048 46998179 -73286133 + B3A SINE B2 9 166 -32 1 943 342 0 0 0 chr13 46998179 46998217 -73286095 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 943 525 32 0 0 chr13 46998217 46998279 -73286033 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 943 450 248 189 38 chr13 46998279 46998305 -73286007 + B3A SINE B2 167 190 -8 1 943 2159 86 43 3 chr13 46998932 46999235 -73285077 + ORR1A2 LTR MaLR 1 315 -12 1 943 968 214 24 14 chr13 46999446 46999659 -73284653 + B3 SINE B2 2 216 0 1 943 334 185 46 0 chr13 46999688 46999753 -73284559 - ID4_ SINE ID -14 69 2 1 943 247 346 0 0 chr13 47000086 47000167 -73284145 + ID2 SINE ID 3 83 0 1 943 216 359 11 11 chr13 47000167 47000179 -73284133 + ID_B1 SINE B4 3 95 -129 2 943 628 195 89 0 chr13 47000184 47000307 -73284005 + B1F2 SINE Alu 3 136 -13 3 943 277 336 93 0 chr13 47001239 47001379 -73282933 + B4 SINE B4 46 198 -94 4 943 542 259 26 0 chr13 47001281 47001397 -73282915 + B1F1 SINE Alu 9 127 -22 5 943 328 180 98 0 chr13 47001395 47001456 -73282856 + ID_B1 SINE B4 146 212 -12 6 943 213 170 0 41 chr13 47001472 47001521 -73282791 + GA-rich Low_complexity Low_complexity 4 50 0 7 943 390 247 12 0 chr13 47001553 47001634 -73282678 + ID4_ SINE ID 1 82 -1 8 943 339 277 21 28 chr13 47001763 47001904 -73282408 + L1ME1 LINE L1 6037 6176 -3 9 943 1264 52 0 0 chr13 47002153 47002307 -73282005 + B2_Mm2 SINE B2 1 154 -41 1 943 234 0 0 0 chr13 47002308 47002334 -73281978 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 1 943 191 36 0 35 chr13 47002398 47002427 -73281885 + (TGG)n Simple_repeat Simple_repeat 2 29 0 1 943 267 287 33 33 chr13 47002933 47003023 -73281289 + PB1D10 SINE Alu 11 100 -17 1 943 235 307 310 0 chr13 47003636 47003750 -73280562 + RSINE1 SINE B4 2 151 -14 1 943 396 0 0 0 chr13 47003757 47003801 -73280511 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 943 434 289 58 22 chr13 47004176 47004314 -73279998 + ID_B1 SINE B4 81 223 -1 1 943 228 176 44 0 chr13 47004325 47004393 -73279919 + GA-rich Low_complexity Low_complexity 2 72 0 1 943 23 0 0 0 chr13 47004434 47004457 -73279855 + AT_rich Low_complexity Low_complexity 1 23 0 1 943 248 170 19 0 chr13 47005191 47005244 -73279068 + GA-rich Low_complexity Low_complexity 1 54 0 1 943 1909 156 56 107 chr13 47007813 47008044 -73276268 - MTD LTR MaLR 0 419 211 2 943 1433 62 17 0 chr13 47008044 47008221 -73276091 - B2_Mm2 SINE B2 -14 181 2 2 943 1909 156 56 107 chr13 47008221 47008419 -73275893 - MTD LTR MaLR -209 210 12 2 943 368 248 50 25 chr13 47008892 47009012 -73275300 + B3A SINE B2 75 197 -1 2 943 440 271 0 10 chr13 47009093 47009190 -73275122 - PB1D7 SINE Alu -1 119 24 2 943 192 353 65 56 chr13 47009377 47009485 -73274827 - MIR SINE MIR -134 128 20 2 943 351 0 0 0 chr13 47009690 47009729 -73274583 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 943 26 0 0 0 chr13 47010174 47010200 -73274112 + AT_rich Low_complexity Low_complexity 1 26 0 2 943 297 282 199 0 chr13 47010290 47010421 -73273891 + RSINE1 SINE B4 3 159 -6 2 943 185 0 40 0 chr13 47010499 47010524 -73273788 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 943 433 200 42 115 chr13 47010524 47010620 -73273692 - PB1 SINE Alu -33 94 5 2 943 716 207 37 0 chr13 47010852 47010987 -73273325 + B1_Mur2 SINE Alu 5 144 -5 3 943 485 289 94 13 chr13 47011763 47011910 -73272402 - B3A SINE B2 -33 183 42 3 943 279 114 0 0 chr13 47011911 47011955 -73272357 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 943 23 0 0 0 chr13 47011967 47011990 -73272322 + AT_rich Low_complexity Low_complexity 1 23 0 3 943 265 299 88 68 chr13 47011996 47012143 -73272169 - B3A SINE B2 -7 191 42 3 943 572 254 109 45 chr13 47012170 47012372 -73271940 - B3 SINE B2 0 216 2 3 943 396 0 0 0 chr13 47012702 47012746 -73271566 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 943 495 246 17 17 chr13 47012948 47013064 -73271248 + ID_B1 SINE B4 102 217 -7 3 943 561 278 45 11 chr13 47013245 47013423 -73270889 + B3A SINE B2 15 198 0 3 943 344 138 15 0 chr13 47013446 47013511 -73270801 + GA-rich Low_complexity Low_complexity 3 68 0 3 943 674 233 0 50 chr13 47013524 47013608 -73270704 + B1_Mur1 SINE Alu 1 84 -65 4 943 585 40 0 0 chr13 47013608 47013684 -73270628 + (TG)n Simple_repeat Simple_repeat 2 77 0 4 943 674 233 0 50 chr13 47013684 47013739 -73270573 + B1_Mur1 SINE Alu 85 133 -16 4 943 405 58 0 0 chr13 47013849 47013901 -73270411 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 943 391 261 98 46 chr13 47014844 47015002 -73269310 + MLT1G3 LTR MaLR 375 581 -14 4 943 1698 31 0 0 chr13 47015006 47015199 -73269113 + B2_Mm1a SINE B2 1 193 0 4 943 1497 140 16 112 chr13 47015286 47015607 -73268705 + MTC LTR MaLR 1 290 -131 4 943 1125 92 0 0 chr13 47015904 47016144 -73268168 + (TG)n Simple_repeat Simple_repeat 1 240 0 4 943 472 296 92 0 chr13 47016149 47016301 -73268011 - B3A SINE B2 -32 166 1 4 943 372 283 159 64 chr13 47017005 47017257 -73267055 + MTEb LTR MaLR 85 378 -1 4 943 34 0 0 0 chr13 47017846 47017880 -73266432 + AT_rich Low_complexity Low_complexity 1 34 0 4 943 437 253 11 0 chr13 47017907 47017998 -73266314 - ID_B1 SINE B4 -51 173 82 5 943 325 90 30 0 chr13 47018554 47018621 -73265691 + (CAAAAA)n Simple_repeat Simple_repeat 6 74 0 5 943 434 188 103 35 chr13 47019164 47019280 -73265032 + B1F SINE Alu 25 148 -1 5 943 239 167 0 106 chr13 47019487 47019534 -73264778 - ID SINE ID -154 70 29 5 943 237 157 0 177 chr13 47019534 47019549 -73264763 - ID4 SINE ID -14 69 19 5 943 361 265 59 29 chr13 47019558 47019694 -73264618 - B1F SINE Alu -7 142 3 5 943 186 43 0 0 chr13 47020249 47020272 -73264040 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 943 681 221 0 22 chr13 47020277 47020416 -73263896 - B1_Mur3 SINE Alu -13 136 1 5 943 247 311 111 0 chr13 47020426 47020516 -73263796 - PB1D9 SINE Alu 0 120 21 5 943 225 0 0 0 chr13 47020619 47020644 -73263668 + (T)n Simple_repeat Simple_repeat 1 25 0 5 943 1185 36 0 0 chr13 47020664 47020802 -73263510 - B1_Mus1 SINE Alu -9 139 2 5 943 542 269 8 0 chr13 47020983 47021102 -73263210 + ID_B1 SINE B4 99 218 -6 6 943 220 208 61 20 chr13 47021059 47021108 -73263204 + PB1D10 SINE Alu 66 116 -1 6 943 229 255 96 58 chr13 47021473 47021577 -73262735 - L2b LINE L2 -28 3347 3240 6 943 270 81 0 0 chr13 47022959 47022996 -73261316 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 6 943 269 132 43 14 chr13 47025030 47025099 -73259213 + (CCG)n Simple_repeat Simple_repeat 1 71 0 6 943 257 206 0 40 chr13 47025138 47025214 -73259098 + (CGGGG)n Simple_repeat Simple_repeat 3 75 0 6 943 180 292 48 77 chr13 47026088 47026192 -73258120 - L2c LINE L2 -20 3367 3267 6 943 288 0 0 0 chr13 47026499 47026531 -73257781 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 943 423 0 0 0 chr13 47026531 47026577 -73257735 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 943 1026 181 0 95 chr13 47026965 47027197 -73257115 + B3 SINE B2 2 211 -5 6 943 333 0 0 0 chr13 47027198 47027235 -73257077 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 943 721 190 168 32 chr13 47027250 47027440 -73256872 + B3 SINE B2 1 216 0 7 943 1006 320 76 31 chr13 47027441 47027860 -73256452 + MLT1C LTR MaLR 23 460 -7 7 943 492 250 0 16 chr13 47027870 47027992 -73256320 + PB1D7 SINE Alu 1 120 0 7 943 224 231 0 0 chr13 47028053 47028092 -73256220 - ID4_ SINE ID -1 82 44 7 943 1335 149 78 56 chr13 47028610 47028916 -73255396 + Lx LINE L1 6342 6654 0 7 943 966 277 5 0 chr13 47028927 47029140 -73255172 + B3 SINE B2 1 214 -2 7 943 392 283 36 90 chr13 47029164 47029331 -73254981 - B3A SINE B2 0 216 59 7 943 386 219 211 0 chr13 47029342 47029456 -73254856 + RSINE1 SINE B4 27 164 -1 7 943 410 270 134 76 chr13 47030039 47030368 -73253944 + ORR1E LTR MaLR 8 355 -4 7 943 718 279 85 92 chr13 47031360 47031676 -73252636 + MTEa LTR MaLR 1 314 -65 8 943 289 390 7 27 chr13 47032035 47032185 -73252127 + MIR SINE MIR 20 166 -96 8 943 347 248 79 79 chr13 47032228 47032338 -73251974 + HAL1-2a_MD LINE L1 2396 2495 -529 8 943 316 274 281 18 chr13 47032338 47032509 -73251803 - B3 SINE B2 0 216 1 8 943 347 248 79 79 chr13 47032509 47032538 -73251774 + HAL1-2a_MD LINE L1 2496 2535 -489 8 943 477 288 63 84 chr13 47032930 47033005 -73251307 - CYRA11_Mm Unknown Y-chromosome -163 454 202 8 943 1309 164 14 0 chr13 47033005 47033219 -73251093 + URR1B DNA MER1_type 9 225 0 8 943 242 349 73 0 chr13 47033860 47033969 -73250343 - MLT1I LTR MaLR -103 308 192 8 943 314 212 8 63 chr13 47034313 47034439 -73249873 - Lx7 LINE L1 0 7696 7578 8 943 449 215 206 17 chr13 47034463 47034569 -73249743 - Lx7 LINE L1 -230 7466 7336 8 943 207 0 0 0 chr13 47034569 47034592 -73249720 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 8 943 449 215 206 17 chr13 47034592 47034665 -73249647 - Lx7 LINE L1 -361 7335 7253 8 943 958 108 26 20 chr13 47034665 47034905 -73249407 + ORR1A2 LTR MaLR 1 329 0 8 943 2532 186 70 2 chr13 47034905 47035405 -73248907 - Lx7 LINE L1 -439 7257 6724 8 943 2361 116 17 6 chr13 47035409 47035765 -73248547 + RLTR31A_Mm LTR ERVK 1 360 -224 9 943 4120 224 81 19 chr13 47035802 47036671 -73247641 - Lx7 LINE L1 -976 6720 5827 8 943 2244 122 16 0 chr13 47036671 47036991 -73247321 + ORR1A4 LTR MaLR 1 325 -4 9 943 4120 224 83 19 chr13 47036991 47037182 -73247130 - Lx7 LINE L1 -1870 5826 5586 8 943 3263 160 33 41 chr13 47037182 47037762 -73246550 - RMER15 LTR ERVL 0 575 1 9 943 893 234 188 30 chr13 47037762 47037842 -73246470 - Lx7 LINE L1 -295 5585 5495 8 943 417 123 192 0 chr13 47037859 47037932 -73246380 + RLTR20C LTR ERVK 1 87 -447 9 943 494 202 0 31 chr13 47037933 47038030 -73246282 + MTEa LTR MaLR 61 154 -225 9 943 232 338 45 70 chr13 47038050 47038292 -73246020 - RMER17C LTR ERVK -67 343 108 9 943 188 163 0 23 chr13 47038713 47038757 -73245555 + C-rich Low_complexity Low_complexity 2 44 0 9 943 248 237 16 33 chr13 47038762 47038823 -73245489 - RLTR20B1 LTR ERVK -399 164 105 9 943 227 276 52 0 chr13 47039511 47039569 -73244743 + B1F2 SINE Alu 1 61 -88 9 943 3443 104 134 87 chr13 47039579 47039914 -73244398 + RMER17A LTR ERVK 1 340 -411 9 943 195 42 0 0 chr13 47039914 47039938 -73244374 + (CCCCCT)n Simple_repeat Simple_repeat 3 26 0 1 943 3443 104 134 87 chr13 47039938 47040319 -73243993 + RMER17A LTR ERVK 341 750 -1 9 943 279 0 0 0 chr13 47040942 47040973 -73243339 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 943 2556 157 107 4 chr13 47041686 47042161 -73242151 + RLTR28 LTR ERVL 1 524 0 1 943 259 337 11 0 chr13 47042307 47042399 -73241913 + (TG)n Simple_repeat Simple_repeat 1 93 0 1 943 563 236 48 35 chr13 47042537 47042682 -73241630 - B4A SINE B4 -139 153 7 1 943 501 287 97 32 chr13 47042682 47042898 -73241414 - MER2 DNA MER2_type -115 230 1 1 943 543 257 0 75 chr13 47043034 47043058 -73241254 + ID_B1 SINE B4 76 223 -1 1 943 819 184 0 0 chr13 47043058 47043194 -73241118 + B1_Mus1 SINE Alu 12 147 -1 1 943 369 131 0 0 chr13 47043197 47043258 -73241054 + (GGA)n Simple_repeat Simple_repeat 2 62 0 1 943 264 77 0 0 chr13 47043266 47043305 -73241007 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 1 943 225 0 0 0 chr13 47043417 47043442 -73240870 + (T)n Simple_repeat Simple_repeat 1 25 0 1 943 282 312 10 79 chr13 47043900 47044001 -73240311 + B1F SINE Alu 51 144 -5 1 943 291 210 16 31 chr13 47044403 47044467 -73239845 - ID_B1 SINE B4 -17 207 145 1 943 835 256 82 5 chr13 47044512 47044708 -73239604 - ID_B1 SINE B4 -1 223 13 1 943 225 197 60 15 chr13 47044651 47044718 -73239594 - MamSINE1 SINE tRNA -220 70 1 1 943 340 310 37 44 chr13 47044731 47044866 -73239446 + MIRb SINE MIR 64 197 -71 1 943 765 292 112 38 chr13 47044873 47045263 -73239049 - MLT2B1 LTR ERVL -21 393 1 1 943 307 220 0 0 chr13 47045524 47045583 -73238729 - Lx8 LINE L1 -739 6734 6676 1 943 1279 253 15 9 chr13 47045595 47045926 -73238386 + Lx8 LINE L1 6779 7111 -362 1 943 230 302 44 55 chr13 47048239 47048330 -73235982 + ID_B1 SINE B4 72 161 -63 1 943 289 174 40 68 chr13 47048257 47048331 -73235981 + B1F2 SINE Alu 13 84 -65 1 943 1785 228 30 3 chr13 47048338 47048699 -73235613 - MTEa LTR MaLR -1 378 8 1 943 186 189 0 0 chr13 47048726 47048763 -73235549 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 943 23 0 0 0 chr13 47048805 47048828 -73235484 + AT_rich Low_complexity Low_complexity 1 23 0 1 943 280 235 158 12 chr13 47048893 47048975 -73235337 + ID_B1 SINE B4 98 191 -33 1 943 247 244 111 91 chr13 47048975 47048992 -73235320 + PB1D10 SINE Alu 17 117 0 1 943 1119 84 28 0 chr13 47048995 47049138 -73235174 + B1_Mus1 SINE Alu 1 147 -1 1 943 353 331 12 72 chr13 47049250 47049416 -73234896 + LTR16B2 LTR ERVL 1 156 -306 1 943 342 187 0 53 chr13 47049470 47049583 -73234729 + C-rich Low_complexity Low_complexity 4 110 0 1 943 542 246 41 0 chr13 47049628 47049750 -73234562 - B1F SINE Alu -21 128 2 1 943 330 292 26 26 chr13 47050047 47050163 -73234149 + RLTR12B LTR ERVK 1 116 -412 1 943 1236 48 7 0 chr13 47050169 47050315 -73233997 - B1_Mus2 SINE Alu 0 147 1 1 943 416 307 39 43 chr13 47050417 47050625 -73233687 + RLTR15 LTR ERVK 150 356 -3 1 943 248 348 0 14 chr13 47051856 47051926 -73232386 + MTEb LTR MaLR 296 364 -15 1 943 337 256 0 71 chr13 47052140 47052224 -73232088 - ID2 SINE ID -5 78 1 1 943 682 200 0 22 chr13 47052298 47052482 -73231830 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 943 279 203 0 0 chr13 47052497 47052561 -73231751 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 943 732 206 14 29 chr13 47052561 47052701 -73231611 - B1_Mus1 SINE Alu -9 139 2 1 943 378 0 0 0 chr13 47052820 47052862 -73231450 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 943 956 143 7 0 chr13 47053104 47053251 -73231061 - B1_Mur4 SINE Alu 0 150 3 1 943 977 185 39 78 chr13 47053298 47053503 -73230809 - B3A SINE B2 0 198 2 1 943 351 44 0 0 chr13 47053630 47053675 -73230637 + (TTTTG)n Simple_repeat Simple_repeat 4 48 0 1 943 1168 73 7 0 chr13 47053685 47053836 -73230476 - B2_Mm2 SINE B2 -41 154 3 1 943 237 299 65 0 chr13 47053844 47053921 -73230391 - ID4_ SINE ID 0 83 2 1 943 364 278 63 108 chr13 47054064 47054412 -73229900 - MTEb LTR MaLR 0 379 33 1 943 607 247 128 62 chr13 47054531 47054773 -73229539 - RMER15 LTR ERVL -43 532 275 1 944 250 217 15 91 chr13 47055394 47055460 -73228852 - ID SINE ID -163 61 1 1 944 432 0 0 0 chr13 47056038 47056086 -73228226 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 944 465 328 98 47 chr13 47057024 47057299 -73227013 - B4A SINE B4 -1 291 3 1 944 234 327 70 6 chr13 47057335 47057492 -73226820 - HAL1 LINE L1 -1176 1331 1165 1 944 309 68 0 0 chr13 47057558 47057602 -73226710 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 944 636 322 7 0 chr13 47057609 47057761 -73226551 - RSINE1 SINE B4 -11 154 2 1 944 251 329 0 12 chr13 47058182 47058265 -73226047 + CT-rich Low_complexity Low_complexity 2 83 0 1 944 243 0 0 0 chr13 47058446 47058473 -73225839 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 944 1047 163 0 53 chr13 47058473 47058661 -73225651 - RMER15 LTR ERVL -43 532 355 1 944 1461 216 9 128 chr13 47058664 47058943 -73225369 - RMER10B LTR ERVL 0 398 158 1 944 2292 187 82 19 chr13 47058943 47059477 -73224835 + RLTR12A LTR ERVK 1 568 0 1 944 1461 216 9 128 chr13 47059477 47059649 -73224663 - RMER10B LTR ERVL -241 157 1 1 944 1999 135 50 15 chr13 47059649 47059981 -73224331 - RMER15 LTR ERVL -217 358 15 1 944 213 225 0 0 chr13 47060200 47060240 -73224072 + A-rich Low_complexity Low_complexity 5 44 0 1 944 1033 74 0 36 chr13 47060246 47060386 -73223926 + B1_Mm SINE Alu 3 137 -10 1 944 975 82 0 0 chr13 47060386 47060520 -73223792 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 1 944 1077 253 71 69 chr13 47060766 47061144 -73223168 - MTEa LTR MaLR 0 379 1 1 944 1652 297 120 25 chr13 47061146 47062090 -73222222 - MTEa-int LTR MaLR -2 1578 460 1 944 180 192 185 37 chr13 47062472 47062526 -73221786 + L4 LINE RTE 469 530 -1499 1 944 222 116 0 0 chr13 47062561 47062604 -73221708 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 1 944 876 20 0 0 chr13 47062679 47062781 -73221531 + (TCTCCC)n Simple_repeat Simple_repeat 6 107 0 1 944 515 245 64 38 chr13 47062828 47062985 -73221327 - RSINE1 SINE B4 -1 164 4 1 944 555 194 0 0 chr13 47063181 47063284 -73221028 - B3 SINE B2 -113 103 1 1 944 279 0 0 0 chr13 47063383 47063414 -73220898 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 944 254 315 76 15 chr13 47063900 47064032 -73220280 + B1F SINE Alu 2 141 -8 1 944 262 246 162 84 chr13 47064042 47064121 -73220191 - MTEa LTR MaLR -31 348 259 1 944 751 176 6 124 chr13 47064121 47064249 -73220063 + B1_Mur4 SINE Alu 2 121 -29 1 944 4460 34 2 15 chr13 47064249 47064783 -73219529 - L1Md_F2 LINE L1 0 6582 6056 1 944 751 176 6 124 chr13 47064783 47064823 -73219489 + B1_Mur4 SINE Alu 122 150 0 1 944 226 125 20 20 chr13 47064823 47064872 -73219440 + GA-rich Low_complexity Low_complexity 3 51 0 1 944 259 295 0 0 chr13 47064876 47064937 -73219375 - ORR1E LTR MaLR -86 293 233 1 944 483 233 92 25 chr13 47064947 47065066 -73219246 - ORR1E LTR MaLR -232 127 1 1 944 555 304 0 65 chr13 47065171 47065326 -73218986 + B1F2 SINE Alu 3 147 -2 1 944 252 0 0 0 chr13 47065392 47065420 -73218892 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 944 1022 119 0 14 chr13 47065433 47065578 -73218734 - B1_Mur4 SINE Alu -6 144 2 1 944 331 216 45 81 chr13 47065625 47065736 -73218576 - RSINE1 SINE B4 -55 110 4 1 944 261 316 32 0 chr13 47066328 47066423 -73217889 + PB1D9 SINE Alu 1 98 -22 1 944 487 305 0 0 chr13 47066338 47066469 -73217843 + ID_B1 SINE B4 92 222 -2 1 944 449 188 65 18 chr13 47066496 47066664 -73217648 + (CA)n Simple_repeat Simple_repeat 1 176 0 1 944 366 165 31 16 chr13 47066718 47066847 -73217465 + (CA)n Simple_repeat Simple_repeat 2 132 0 1 944 272 158 0 17 chr13 47067074 47067132 -73217180 + C-rich Low_complexity Low_complexity 3 59 0 1 944 2350 268 41 55 chr13 47067440 47068219 -73216093 + ORR1E-int LTR MaLR 21 788 -582 1 944 870 266 39 36 chr13 47068211 47068547 -73215765 + RLTR15 LTR ERVK 7 343 -16 1 944 1819 234 81 101 chr13 47068574 47069194 -73215118 + ORR1E-int LTR MaLR 781 1553 -27 1 944 578 209 157 6 chr13 47069174 47069333 -73214979 + ORR1E LTR MaLR 7 189 -170 1 944 1445 144 18 5 chr13 47069371 47069594 -73214718 + URR1A DNA MER1_type 1 226 0 1 944 394 273 0 11 chr13 47069594 47069683 -73214629 + ORR1E LTR MaLR 270 357 -2 1 944 481 283 0 0 chr13 47069862 47069975 -73214337 + ID_B1 SINE B4 107 219 -5 1 944 2408 196 21 56 chr13 47070177 47070697 -73213615 - RLTR12B LTR ERVK -26 502 1 1 944 292 238 25 0 chr13 47071027 47071107 -73213205 + GA-rich Low_complexity Low_complexity 3 84 0 1 944 279 316 42 0 chr13 47071461 47071556 -73212756 - MTE2a LTR MaLR -10 369 271 1 944 346 143 11 11 chr13 47071645 47071737 -73212575 + GA-rich Low_complexity Low_complexity 1 92 0 1 944 360 0 0 0 chr13 47071885 47071925 -73212387 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 944 242 256 12 60 chr13 47071933 47072016 -73212296 - MLT2B3 LTR ERVL -473 81 3 1 944 253 299 29 58 chr13 47072217 47072320 -73211992 - Tigger5 DNA MER2_type -13 2393 2294 1 944 785 152 90 8 chr13 47072327 47072460 -73211852 + B1_Mur2 SINE Alu 5 148 -1 1 944 615 206 0 37 chr13 47072466 47072653 -73211659 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 944 380 340 46 13 chr13 47072777 47072929 -73211383 - Tigger5 DNA MER2_type -2221 185 29 1 944 592 174 0 0 chr13 47074145 47074243 -73210069 - PB1D10 SINE Alu -5 112 15 1 944 265 254 59 103 chr13 47074158 47074294 -73210018 - MT2B2 LTR ERVL -329 255 126 1 944 1394 125 4 47 chr13 47074299 47074534 -73209778 - URR1B DNA MER1_type 0 225 1 1 944 452 308 108 24 chr13 47074895 47075108 -73209204 + MIRc SINE MIR 33 263 -5 1 944 444 229 10 40 chr13 47075728 47075828 -73208484 + RSINE1 SINE B4 17 113 -52 1 944 551 159 7 27 chr13 47076240 47076389 -73207923 + CT-rich Low_complexity Low_complexity 3 148 0 1 944 562 204 28 104 chr13 47076649 47076900 -73207412 + L1M3 LINE L1 5417 5648 -541 1 944 768 227 0 0 chr13 47076946 47077087 -73207225 - ID_B1 SINE B4 0 224 84 1 944 935 259 53 18 chr13 47077151 47077379 -73206933 - Tigger5 DNA MER2_type -2164 242 7 2 944 904 129 11 22 chr13 47077528 47077710 -73206602 + GA-rich Low_complexity Low_complexity 1 180 0 2 944 808 191 7 10 chr13 47078621 47078929 -73205383 + CT-rich Low_complexity Low_complexity 1 306 0 2 944 318 261 0 0 chr13 47078959 47079024 -73205288 - ID4_ SINE ID -17 66 2 2 944 24 0 0 0 chr13 47079028 47079052 -73205260 + AT_rich Low_complexity Low_complexity 1 24 0 2 944 1336 40 48 58 chr13 47079059 47079247 -73205065 - B2_Mm2 SINE B2 -9 186 1 2 944 827 156 386 3 chr13 47079268 47079540 -73204772 - ORR1C1 LTR MaLR -2 376 1 2 944 1003 221 50 25 chr13 47079560 47079838 -73204474 - B4A SINE B4 -6 286 2 2 944 255 93 0 0 chr13 47079869 47079912 -73204400 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 2 944 387 119 0 0 chr13 47080633 47080700 -73203612 + (GA)n Simple_repeat Simple_repeat 1 67 0 2 944 312 326 0 0 chr13 47080709 47080804 -73203508 - RSINE1 SINE B4 -69 96 2 2 944 339 292 25 31 chr13 47080815 47080974 -73203338 + CT-rich Low_complexity Low_complexity 4 161 0 2 944 428 308 0 27 chr13 47081016 47081126 -73203186 + MLT1A1 LTR MaLR 300 406 -2 2 944 231 61 0 0 chr13 47081386 47081419 -73202893 + (TATG)n Simple_repeat Simple_repeat 4 36 0 2 944 957 153 5 54 chr13 47081419 47081605 -73202707 - B2_Mm2 SINE B2 -18 177 1 2 944 681 252 14 7 chr13 47082288 47082436 -73201876 - B1_Mur1 SINE Alu 0 149 1 2 944 519 248 0 18 chr13 47082439 47082550 -73201762 - PB1D10 SINE Alu -2 115 7 2 944 255 31 0 0 chr13 47082587 47082619 -73201693 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 944 337 178 53 114 chr13 47082789 47082903 -73201409 - PB1D10 SINE Alu -9 108 2 2 944 1036 301 56 11 chr13 47083445 47083801 -73200511 - MLT1B LTR MaLR -18 372 1 2 944 243 319 14 0 chr13 47083960 47084029 -73200283 - ID SINE ID -146 78 9 2 944 578 286 0 0 chr13 47084136 47084262 -73200050 + ID_B1 SINE B4 80 205 -19 2 944 243 0 0 0 chr13 47084862 47084889 -73199423 + (A)n Simple_repeat Simple_repeat 1 27 0 2 944 630 143 0 0 chr13 47084888 47084993 -73199319 + (TA)n Simple_repeat Simple_repeat 1 105 0 2 944 212 280 118 20 chr13 47085398 47085500 -73198812 - L2a LINE L2 -161 3265 3154 2 944 846 306 71 84 chr13 47085607 47086263 -73198049 + MLT1E2 LTR MaLR 1 625 -2 2 944 879 235 74 15 chr13 47086276 47086479 -73197833 + B4 SINE B4 5 219 -73 2 944 306 87 0 0 chr13 47086545 47086591 -73197721 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 2 944 932 119 14 37 chr13 47087502 47087704 -73196608 + B2_Mm2 SINE B2 2 192 -1 2 944 1692 162 146 37 chr13 47087868 47088246 -73196066 - MTD LTR MaLR 0 419 1 2 944 463 303 16 44 chr13 47089589 47089772 -73194540 + ID_B1 SINE B4 14 191 -33 2 944 1272 91 0 11 chr13 47089865 47090043 -73194269 + ORR1A2 LTR MaLR 27 202 -125 2 944 553 27 0 39 chr13 47090041 47090118 -73194194 + B1_Mm SINE Alu 74 147 0 2 944 505 274 46 126 chr13 47090165 47090301 -73194011 + B3A SINE B2 28 161 -37 2 944 832 108 13 0 chr13 47090301 47090458 -73193854 + (CA)n Simple_repeat Simple_repeat 1 159 0 2 944 226 274 46 126 chr13 47090458 47090474 -73193838 + B2_Mm2 SINE B2 160 172 -23 2 944 1409 46 74 0 chr13 47090474 47090649 -73193663 - B2_Mm1t SINE B2 -3 190 3 2 944 226 274 46 126 chr13 47090649 47090670 -73193642 + B2_Mm2 SINE B2 173 188 -7 2 944 647 235 43 22 chr13 47090656 47090795 -73193517 - B1_Mur1 SINE Alu -5 144 3 2 944 546 239 75 58 chr13 47091076 47091472 -73192840 + RLTR15 LTR ERVK 1 350 -9 2 944 1265 41 0 0 chr13 47091587 47091734 -73192578 - B1_Mm SINE Alu 0 147 1 2 944 433 241 133 60 chr13 47091872 47092022 -73192290 + ID_B1 SINE B4 2 162 -62 2 944 305 323 131 20 chr13 47092202 47092401 -73191911 + L1MC LINE L1 2718 2938 -3208 2 944 504 246 40 16 chr13 47092409 47092533 -73191779 + ID_B1 SINE B4 98 224 0 2 944 1082 205 9 14 chr13 47092621 47092839 -73191473 + B4 SINE B4 3 219 -73 2 944 1423 207 140 11 chr13 47092858 47093229 -73191083 - MTD LTR MaLR 0 419 1 2 944 215 125 25 0 chr13 47093279 47093319 -73190993 + (CATA)n Simple_repeat Simple_repeat 4 44 0 2 944 201 74 0 0 chr13 47093353 47093380 -73190932 + (CATAT)n Simple_repeat Simple_repeat 2 28 0 2 944 611 294 7 0 chr13 47093437 47093573 -73190739 + RSINE1 SINE B4 5 141 -24 2 944 414 0 0 0 chr13 47093573 47093619 -73190693 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 944 748 315 51 30 chr13 47093726 47094217 -73190095 + L1M5 LINE L1 3151 3651 -2495 2 944 525 274 126 24 chr13 47095377 47095583 -73188729 + MTEa LTR MaLR 2 228 -151 2 944 554 252 20 13 chr13 47095597 47095746 -73188566 - HAL1-2a_MD LINE L1 -519 2505 2356 2 944 586 306 72 25 chr13 47095788 47096066 -73188246 + MT2A LTR ERVL 227 517 -16 2 944 826 245 44 29 chr13 47096658 47096864 -73187448 + B3 SINE B2 2 210 -6 2 944 21 0 0 0 chr13 47096879 47096900 -73187412 + AT_rich Low_complexity Low_complexity 1 21 0 2 944 203 349 32 0 chr13 47096936 47096999 -73187313 + MIRc SINE MIR 80 144 -124 2 944 1614 152 42 125 chr13 47097026 47097403 -73186909 + ORR1B1 LTR MaLR 41 386 -8 2 944 196 189 27 0 chr13 47097407 47097444 -73186868 + MIRc SINE MIR 164 201 -67 2 944 2741 134 10 54 chr13 47097716 47098196 -73186116 + RMER6B LTR ERVK 1 459 -2 2 944 555 62 0 0 chr13 47098312 47098392 -73185920 + (TG)n Simple_repeat Simple_repeat 2 81 0 2 944 305 164 0 52 chr13 47098424 47098482 -73185830 - HAL1-3A_ME LINE L1 -828 2030 1976 2 944 466 245 28 0 chr13 47099564 47099670 -73184642 - PB1D9 SINE Alu -4 116 8 2 944 304 261 62 0 chr13 47099614 47099679 -73184633 - B4 SINE B4 -144 148 80 2 944 3873 182 50 88 chr13 47100093 47101031 -73183281 + RMER19B LTR ERVK 1 902 0 2 944 405 364 86 0 chr13 47101133 47101295 -73183017 + Tigger5 DNA MER2_type 9 184 -2222 2 944 340 309 11 11 chr13 47101532 47101627 -73182685 + Tigger5 DNA MER2_type 2308 2402 -4 2 944 478 298 17 69 chr13 47101795 47101968 -73182344 - RSINE1 SINE B4 0 165 2 2 944 1096 188 77 0 chr13 47102301 47102508 -73181804 + ID_B1 SINE B4 1 223 -1 2 944 1506 54 38 0 chr13 47103020 47103205 -73181107 + B2_Mm2 SINE B2 2 193 -2 2 944 998 156 194 0 chr13 47103884 47104064 -73180248 + B3 SINE B2 2 216 0 2 944 42 48 0 0 chr13 47104064 47104127 -73180185 + AT_rich Low_complexity Low_complexity 1 63 0 2 944 589 273 33 20 chr13 47106866 47107019 -73177293 + RSINE1 SINE B4 11 165 0 2 944 615 42 31 31 chr13 47107274 47107371 -73176941 + B1_Mur4 SINE Alu 41 137 -13 2 944 217 0 29 29 chr13 47107371 47107405 -73176907 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 2 944 891 271 10 19 chr13 47107420 47107627 -73176685 + ID_B1 SINE B4 12 216 -8 2 944 279 133 0 0 chr13 47108180 47108225 -73176087 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 944 298 311 93 46 chr13 47108231 47108339 -73175973 - ID_B1 SINE B4 -28 196 84 2 944 236 330 158 28 chr13 47108598 47108813 -73175499 + MIRb SINE MIR 26 268 0 2 944 222 259 17 0 chr13 47110116 47110174 -73174138 + (CCG)n Simple_repeat Simple_repeat 3 61 0 2 944 273 196 173 67 chr13 47110634 47110738 -73173574 + PB1D7 SINE Alu 5 119 -1 2 944 407 134 0 29 chr13 47110825 47110894 -73173418 + B1_Mur1 SINE Alu 83 149 0 2 944 648 221 129 75 chr13 47111209 47111395 -73172917 + B3A SINE B2 1 196 -2 2 944 556 278 40 11 chr13 47111902 47112077 -73172235 - B3A SINE B2 -18 180 1 2 944 816 198 124 5 chr13 47112099 47112292 -73172020 - B3 SINE B2 0 216 1 2 944 364 264 139 41 chr13 47112354 47112599 -73171713 - Charlie5 DNA MER1_type 0 2624 2356 2 944 180 0 0 0 chr13 47112977 47112997 -73171315 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 944 419 298 50 0 chr13 47112997 47113118 -73171194 - ID_B1 SINE B4 -11 213 87 2 944 455 284 0 0 chr13 47113577 47113693 -73170619 + PB1D9 SINE Alu 4 119 -1 2 944 441 0 0 0 chr13 47113756 47113805 -73170507 + (TAA)n Simple_repeat Simple_repeat 3 51 0 2 944 1447 44 61 0 chr13 47113943 47114124 -73170188 + B2_Mm2 SINE B2 1 192 -3 2 944 409 221 39 0 chr13 47114250 47114327 -73169985 - ID4_ SINE ID -3 80 1 2 944 602 291 32 55 chr13 47114356 47114444 -73169868 - B3 SINE B2 -3 213 128 2 944 1402 69 37 5 chr13 47114444 47114633 -73169679 + B2_Mm2 SINE B2 1 195 0 2 944 602 291 32 55 chr13 47114633 47114762 -73169550 - B3 SINE B2 -89 127 1 2 944 952 144 0 7 chr13 47114826 47114973 -73169339 + B1_Mur4 SINE Alu 4 149 -1 2 944 1356 73 39 0 chr13 47115178 47115356 -73168956 - B2_Mm1a SINE B2 -8 185 1 2 944 673 170 89 0 chr13 47115476 47115611 -73168701 + B1_Mus1 SINE Alu 1 147 -1 2 944 384 126 0 51 chr13 47115647 47115764 -73168548 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 2 944 776 293 128 16 chr13 47115828 47116147 -73168165 - ORR1E LTR MaLR -4 355 1 2 944 311 126 30 52 chr13 47117000 47117134 -73167178 + A-rich Low_complexity Low_complexity 1 131 0 2 944 21 36 0 0 chr13 47117378 47117406 -73166906 + AT_rich Low_complexity Low_complexity 1 28 0 2 944 3136 139 59 101 chr13 47117407 47118054 -73166258 + RMER19B LTR ERVK 4 623 -279 2 944 475 224 0 0 chr13 47118056 47118141 -73166171 - B3 SINE B2 -131 85 1 2 944 720 106 106 0 chr13 47118196 47118309 -73166003 - B1_Mus1 SINE Alu -2 146 22 3 944 456 264 92 7 chr13 47118309 47118337 -73165975 - ID_B1 SINE B4 -2 222 70 3 944 3188 39 39 0 chr13 47118377 47118758 -73165554 - MTA_Mm LTR MaLR 0 396 1 3 944 21 0 0 0 chr13 47118973 47118994 -73165318 + AT_rich Low_complexity Low_complexity 1 21 0 3 944 802 76 13 10 chr13 47119391 47119509 -73164803 + ORR1A2 LTR MaLR 1 152 -226 3 944 1212 92 34 11 chr13 47119538 47119713 -73164599 + B2_Mm1t SINE B2 1 179 -14 3 944 356 156 9 0 chr13 47119744 47119808 -73164504 + B2_Mm2 SINE B2 47 114 -102 3 944 229 252 54 72 chr13 47120369 47120480 -73163832 - RLTR13C1 LTR ERVK -643 340 232 3 944 378 125 0 0 chr13 47120489 47120545 -73163767 + MTB_Mm LTR MaLR 352 407 0 3 944 343 144 198 7 chr13 47120630 47120727 -73163585 - B1_Mus2 SINE Alu -1 146 1 3 944 651 264 170 4 chr13 47120970 47121217 -73163095 - B4A SINE B4 -4 288 1 3 944 234 0 0 0 chr13 47121229 47121255 -73163057 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 944 531 176 36 27 chr13 47121255 47121366 -73162946 - ID_B1 SINE B4 -12 212 101 3 944 662 120 30 0 chr13 47121573 47121673 -73162639 + IAPLTR1a_Mm LTR ERVK 1 103 -234 3 944 1352 47 0 17 chr13 47121641 47121815 -73162497 - RLTR10 LTR ERVK -219 171 1 3 944 382 226 12 12 chr13 47121824 47121909 -73162403 - PB1D10 SINE Alu -32 85 1 3 944 297 276 290 19 chr13 47121942 47122097 -73162215 + B3A SINE B2 1 197 -1 3 944 351 266 132 39 chr13 47122147 47122276 -73162036 + RSINE1 SINE B4 25 165 0 3 944 579 209 7 21 chr13 47122281 47122564 -73161748 + (CATA)n Simple_repeat Simple_repeat 1 279 0 3 944 293 322 0 22 chr13 47122888 47122980 -73161332 + PB1D10 SINE Alu 24 113 -4 3 944 1668 36 0 0 chr13 47123097 47123290 -73161022 + B2_Mm1a SINE B2 1 193 0 3 944 244 279 14 14 chr13 47123417 47123486 -73160826 + ID4 SINE ID 12 80 -3 3 944 291 194 60 0 chr13 47123556 47123623 -73160689 + ID4 SINE ID 2 72 -11 3 944 427 259 9 44 chr13 47123694 47123807 -73160505 + PB1D10 SINE Alu 1 109 -8 3 944 1364 194 148 18 chr13 47124472 47124802 -73159510 + ORR1D1 LTR MaLR 1 373 -1 3 944 283 206 118 0 chr13 47124833 47124901 -73159411 + B1F SINE Alu 74 149 0 3 944 1218 54 0 7 chr13 47124983 47125132 -73159180 - B1_Mus1 SINE Alu 0 148 1 3 944 714 208 0 0 chr13 47125173 47125298 -73159014 - B1F SINE Alu -22 127 3 3 944 1217 55 0 0 chr13 47125331 47125477 -73158835 + B1_Mus2 SINE Alu 2 147 0 3 944 297 75 0 0 chr13 47125477 47125517 -73158795 + (A)n Simple_repeat Simple_repeat 1 40 0 3 944 727 224 44 39 chr13 47125651 47125832 -73158480 + B3A SINE B2 1 182 -16 3 944 371 21 0 20 chr13 47126712 47126761 -73157551 + (TAA)n Simple_repeat Simple_repeat 1 48 0 3 944 673 137 48 0 chr13 47127076 47127244 -73157068 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 3 944 421 255 0 0 chr13 47127263 47127357 -73156955 - PB1D10 SINE Alu -22 95 2 3 944 379 359 58 12 chr13 47127433 47127605 -73156707 + MIR SINE MIR 75 254 -8 3 944 189 204 0 0 chr13 47128405 47128432 -73155880 + (TTA)n Simple_repeat Simple_repeat 2 28 0 3 944 2675 145 154 4 chr13 47128432 47128939 -73155373 + RMER4B LTR ERVK 1 583 -2 3 944 189 204 0 0 chr13 47128939 47128955 -73155357 + (TTA)n Simple_repeat Simple_repeat 1 16 0 3 944 383 0 21 0 chr13 47128968 47129015 -73155297 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 944 698 227 21 7 chr13 47129024 47129166 -73155146 - RSINE1 SINE B4 -19 146 3 3 944 531 147 134 27 chr13 47129175 47129287 -73155025 - B1_Mur3 SINE Alu -21 128 5 3 944 390 268 128 99 chr13 47129304 47129349 -73154963 + B4A SINE B4 12 51 -241 3 944 2862 145 63 18 chr13 47129349 47129854 -73154458 + RLTR12B LTR ERVK 1 528 0 3 944 390 268 128 99 chr13 47129854 47130081 -73154231 + B4A SINE B4 52 291 -1 3 944 249 323 0 8 chr13 47130219 47130353 -73153959 + (CA)n Simple_repeat Simple_repeat 2 134 0 3 944 709 266 13 0 chr13 47130615 47130773 -73153539 + RSINE1 SINE B4 2 161 -4 3 944 211 164 54 14 chr13 47130774 47130848 -73153464 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 3 944 424 191 63 12 chr13 47130903 47131004 -73153308 - PB1D10 SINE Alu 0 120 13 3 944 331 263 149 28 chr13 47131667 47131808 -73152504 + MER3 DNA MER1_type 17 174 -35 3 944 235 312 167 0 chr13 47131808 47131904 -73152408 + PB1D7 SINE Alu 1 112 -8 3 944 298 294 73 40 chr13 47132200 47132324 -73151988 - Tigger9b DNA MER2_type -2 622 495 3 944 638 279 0 0 chr13 47132322 47132458 -73151854 + ID_B1 SINE B4 82 217 -7 3 944 212 300 35 70 chr13 47132381 47132467 -73151845 + PB1D7 SINE Alu 38 120 0 3 944 543 253 137 29 chr13 47132467 47132642 -73151670 + B3A SINE B2 1 194 -4 3 944 886 240 120 0 chr13 47132668 47132901 -73151411 + B4A SINE B4 6 266 -26 3 944 312 317 12 0 chr13 47133740 47133822 -73150490 - ID4 SINE ID 0 83 1 3 944 930 88 40 0 chr13 47134015 47134140 -73150172 + B1_Mus1 SINE Alu 19 148 0 3 944 269 247 106 96 chr13 47134019 47134207 -73150105 - YREP_Mm Unknown Unknown -1517 295 106 3 944 559 260 24 0 chr13 47134884 47135011 -73149301 - ID_B1 SINE B4 -94 130 1 3 944 183 184 0 0 chr13 47135034 47135072 -73149240 + T-rich Low_complexity Low_complexity 1 38 0 3 944 476 224 59 17 chr13 47135237 47135355 -73148957 - ID_B1 SINE B4 -7 217 95 3 944 240 325 115 30 chr13 47135654 47135819 -73148493 - MIRc SINE MIR -50 218 40 3 944 563 316 0 7 chr13 47136057 47136210 -73148102 - RSINE1 SINE B4 -8 157 6 3 944 615 296 72 11 chr13 47136530 47136711 -73147601 - ID_B1 SINE B4 -26 198 7 3 944 395 285 80 40 chr13 47137053 47137203 -73147109 + ID_B1 SINE B4 69 224 0 3 944 574 254 62 16 chr13 47137077 47137205 -73147107 + B1F2 SINE Alu 16 149 0 3 944 479 272 61 4 chr13 47137234 47137391 -73146921 + B3A SINE B2 19 190 -5 3 944 358 195 0 40 chr13 47138026 47138118 -73146194 - B1F1 SINE Alu 0 120 41 3 944 230 282 53 35 chr13 47140929 47141043 -73143269 + PB1D7 SINE Alu 1 116 -4 3 944 219 213 229 0 chr13 47141654 47141715 -73142597 + ID4_ SINE ID 8 82 -1 3 944 724 255 0 32 chr13 47141946 47142104 -73142208 + RSINE1 SINE B4 11 163 -2 3 944 509 254 90 0 chr13 47142611 47142733 -73141579 - ID_B1 SINE B4 -7 217 85 3 944 424 280 39 31 chr13 47142983 47143112 -73141200 - ID_B1 SINE B4 -14 210 81 3 944 387 0 0 0 chr13 47143802 47143845 -73140467 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 3 944 1218 22 0 0 chr13 47143845 47143982 -73140330 - B1_Mm SINE Alu -9 138 2 3 944 834 262 23 56 chr13 47143982 47144196 -73140116 - B3 SINE B2 -9 207 1 3 944 227 174 0 0 chr13 47144363 47144409 -73139903 + ID SINE ID 1 46 -178 3 944 514 270 79 30 chr13 47145031 47145233 -73139079 + ID_B1 SINE B4 2 213 -11 3 944 223 244 155 24 chr13 47146716 47146800 -73137512 - PB1D10 SINE Alu -22 95 1 3 944 654 163 52 44 chr13 47147811 47147946 -73136366 - B1_Mur1 SINE Alu -9 140 5 3 944 258 167 25 111 chr13 47147951 47147965 -73136347 - PB1D10 SINE Alu -1 116 45 3 944 302 277 15 0 chr13 47147965 47148030 -73136282 - ID_B1 SINE B4 -34 190 125 3 944 395 265 143 89 chr13 47148152 47148459 -73135853 - L1M5 LINE L1 -818 5328 4983 3 944 1540 62 16 0 chr13 47148540 47148732 -73135580 + B2_Mm2 SINE B2 1 195 0 3 944 290 194 32 0 chr13 47149977 47150039 -73134273 + ID4 SINE ID 2 65 -18 3 944 548 254 0 80 chr13 47150587 47150737 -73133575 + ID_B1 SINE B4 82 219 -5 3 944 216 243 42 28 chr13 47150787 47150859 -73133453 - ID4_ SINE ID -10 73 1 3 944 281 238 73 45 chr13 47150995 47151146 -73133166 - L1ME3 LINE L1 -138 6026 5875 3 944 305 234 39 13 chr13 47151221 47151299 -73133013 - ID4_ SINE ID -2 81 2 3 944 239 314 78 10 chr13 47151308 47151411 -73132901 - B1F SINE Alu -1 148 39 3 944 1272 41 0 0 chr13 47152545 47152692 -73131620 - B1_Mm SINE Alu 0 147 1 3 944 327 344 121 72 chr13 47152807 47153170 -73131142 - L1ME3A LINE L1 -37 6136 5756 3 944 235 228 22 122 chr13 47153172 47153262 -73131050 - LTR45C LTR ERV1 -391 148 68 3 944 328 244 30 192 chr13 47153265 47153432 -73130880 - B1F1 SINE Alu -9 140 1 3 944 356 269 19 124 chr13 47153432 47153479 -73130833 - ID SINE ID -146 78 49 3 944 1223 90 84 0 chr13 47153727 47153745 -73130567 - B2_Mm1t SINE B2 0 193 176 3 944 222 37 0 0 chr13 47153745 47153772 -73130540 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 3 944 1223 90 84 0 chr13 47153772 47153931 -73130381 - B2_Mm1t SINE B2 -18 175 2 3 944 216 0 0 0 chr13 47154858 47154882 -73129430 + (T)n Simple_repeat Simple_repeat 1 24 0 3 944 303 194 14 43 chr13 47155089 47155159 -73129153 - ID4 SINE ID -11 72 5 3 944 522 294 94 94 chr13 47155438 47155790 -73128522 - MTE2a LTR MaLR 0 419 51 3 944 269 317 149 58 chr13 47156653 47156827 -73127485 + MER2 DNA MER2_type 153 342 -3 3 944 278 169 0 106 chr13 47157529 47157595 -73126717 + PB1D9 SINE Alu 22 80 -40 4 944 208 195 48 12 chr13 47157687 47157770 -73126542 + (TA)n Simple_repeat Simple_repeat 1 86 0 4 944 581 294 33 0 chr13 47158074 47158227 -73126085 - RSINE1 SINE B4 -6 159 2 4 944 216 0 0 0 chr13 47158525 47158549 -73125763 + (CAG)n Simple_repeat Simple_repeat 2 25 0 4 944 513 214 14 100 chr13 47158785 47158917 -73125395 + B1_Mur4 SINE Alu 23 143 -7 4 944 2680 85 74 12 chr13 47158917 47159322 -73124990 + Lx LINE L1 6225 6654 0 4 944 464 225 27 9 chr13 47160131 47160243 -73124069 - PB1D9 SINE Alu -5 115 2 4 944 530 202 133 31 chr13 47160787 47160915 -73123397 + B1_Mur1 SINE Alu 1 141 -8 4 944 539 198 0 57 chr13 47161075 47161198 -73123114 - B1_Mus2 SINE Alu -1 146 31 4 944 248 234 51 25 chr13 47161895 47161974 -73122338 - B1F1 SINE Alu -59 90 10 4 944 766 280 23 27 chr13 47162017 47162237 -73122075 + B4A SINE B4 9 227 -65 4 944 232 250 0 0 chr13 47162324 47162368 -73121944 + B3 SINE B2 39 82 -134 4 944 737 185 7 52 chr13 47162415 47162569 -73121743 - B1F SINE Alu -2 147 1 4 944 481 249 49 117 chr13 47163273 47163478 -73120834 + MER53 DNA hAT 2 192 -1 4 944 429 20 0 0 chr13 47164192 47164242 -73120070 + (CACG)n Simple_repeat Simple_repeat 3 52 0 4 944 606 247 215 61 chr13 47164791 47165102 -73119210 - MTE2a LTR MaLR -6 373 15 4 944 692 179 0 0 chr13 47165324 47165441 -73118871 - PB1D10 SINE Alu 0 117 1 4 944 214 200 36 0 chr13 47166554 47166609 -73117703 + PB1D7 SINE Alu 1 57 -63 4 944 1052 255 25 4 chr13 47167434 47167713 -73116599 + B4A SINE B4 4 288 -4 4 944 319 235 37 0 chr13 47168163 47168244 -73116068 - PB1D10 SINE Alu -22 95 12 4 944 248 295 12 49 chr13 47168770 47168852 -73115460 - B4 SINE B4 -6 286 208 4 944 450 276 108 16 chr13 47172312 47172441 -73111871 - B1F2 SINE Alu -8 141 1 4 944 356 263 40 10 chr13 47173184 47173284 -73111028 - ID_B1 SINE B4 -13 211 109 4 944 278 268 106 28 chr13 47174893 47175035 -73109277 - MLT1B LTR MaLR -225 165 13 4 944 1198 54 7 0 chr13 47176110 47176257 -73108055 - B1_Mus1 SINE Alu 0 148 1 4 944 929 137 89 28 chr13 47176411 47176591 -73107721 - B2_Mm2 SINE B2 -4 191 1 4 944 305 202 152 0 chr13 47176660 47176739 -73107573 - PB1D7 SINE Alu -21 99 9 4 944 501 278 131 35 chr13 47177356 47177554 -73106758 - B4 SINE B4 -25 267 51 4 944 1090 78 42 0 chr13 47182062 47182228 -73102084 + B2_Mm1t SINE B2 20 192 -1 4 944 1814 179 136 20 chr13 47182254 47182710 -73101602 - RLTR12B LTR ERVK -9 519 11 4 944 419 145 0 0 chr13 47182716 47182785 -73101527 + URR1B DNA MER1_type 157 225 0 4 944 389 281 55 0 chr13 47184211 47184339 -73099973 + L2a LINE L2 3290 3424 -2 4 944 434 95 0 0 chr13 47185565 47185628 -73098684 - B2_Mm2 SINE B2 -131 64 2 4 945 214 194 0 0 chr13 47186228 47186264 -73098048 + (CCAA)n Simple_repeat Simple_repeat 4 39 0 4 945 200 331 98 15 chr13 47186468 47186600 -73097712 + MIRb SINE MIR 19 161 -107 4 945 741 158 45 8 chr13 47186609 47186743 -73097569 + B1_Mur3 SINE Alu 2 140 -9 4 945 216 0 0 0 chr13 47186743 47186767 -73097545 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 945 456 91 0 0 chr13 47187048 47187114 -73097198 + (CAAG)n Simple_repeat Simple_repeat 4 69 0 4 945 264 180 16 16 chr13 47187898 47187960 -73096352 + PB1D10 SINE Alu 17 78 -39 4 945 285 29 0 0 chr13 47188208 47188242 -73096070 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 945 388 267 224 0 chr13 47188250 47188366 -73095946 - B3A SINE B2 -55 143 2 4 945 26 0 0 0 chr13 47188604 47188630 -73095682 + AT_rich Low_complexity Low_complexity 1 26 0 4 945 737 180 50 7 chr13 47188868 47189008 -73095304 - B1_Mus1 SINE Alu -2 146 1 4 945 700 188 64 14 chr13 47189246 47189386 -73094926 + B1_Mus1 SINE Alu 2 148 0 4 945 1234 70 116 0 chr13 47189391 47189563 -73094749 + B2_Mm2 SINE B2 2 193 -2 4 945 1585 299 77 47 chr13 47189773 47190557 -73093755 + Lx8 LINE L1 6415 7221 -252 4 945 585 177 221 0 chr13 47190919 47191032 -73093280 - B1_Mus2 SINE Alu -9 138 1 4 945 198 0 0 0 chr13 47191183 47191205 -73093107 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 945 393 329 53 13 chr13 47191447 47191598 -73092714 + B4A SINE B4 74 230 -62 4 945 225 219 132 12 chr13 47191577 47191660 -73092652 + B1F2 SINE Alu 21 113 -36 4 945 21 0 0 0 chr13 47191726 47191747 -73092565 + AT_rich Low_complexity Low_complexity 1 21 0 4 945 662 203 78 108 chr13 47191819 47191970 -73092342 + B3A SINE B2 6 153 -40 4 945 279 79 0 0 chr13 47191970 47192008 -73092304 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 945 353 203 78 108 chr13 47192008 47192022 -73092290 + B2_Mm1a SINE B2 154 166 -27 4 945 354 252 18 47 chr13 47192128 47192234 -73092078 + B3 SINE B2 27 139 -59 4 945 404 309 106 28 chr13 47192310 47192490 -73091822 - B3A SINE B2 0 198 5 4 945 24 0 0 0 chr13 47193038 47193062 -73091250 + AT_rich Low_complexity Low_complexity 1 24 0 4 945 871 214 16 27 chr13 47193098 47193281 -73091031 + B3 SINE B2 3 183 -33 4 945 282 44 0 0 chr13 47194012 47194054 -73090258 + B1_Mm SINE Alu 73 141 -6 4 945 374 20 40 0 chr13 47194058 47194108 -73090204 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 4 945 288 258 161 32 chr13 47196120 47196244 -73088068 + B3 SINE B2 66 205 -11 4 945 1090 72 7 0 chr13 47196418 47196556 -73087756 + B1_Mm SINE Alu 1 139 -8 4 945 333 47 0 0 chr13 47196556 47196599 -73087713 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 4 945 315 186 114 23 chr13 47197837 47197925 -73086387 - L1MA4 LINE L1 -176 6124 6029 4 945 238 312 83 0 chr13 47198266 47198362 -73085950 + BC1_Mm scRNA scRNA 2 105 -47 4 945 366 250 51 101 chr13 47198372 47198510 -73085802 + RSINE1 SINE B4 4 134 -31 4 945 865 192 119 5 chr13 47198548 47198742 -73085570 + B3 SINE B2 1 216 0 4 945 638 173 83 65 chr13 47199662 47199899 -73084413 + RMER17C LTR ERVK 1 320 -90 4 945 233 119 24 0 chr13 47200114 47200156 -73084156 + (GAAAA)n Simple_repeat Simple_repeat 2 44 0 4 945 216 170 0 0 chr13 47200944 47200997 -73083315 + CT-rich Low_complexity Low_complexity 2 54 0 4 945 37 52 0 0 chr13 47201269 47201327 -73082985 + GC_rich Low_complexity Low_complexity 1 58 0 4 945 26 50 0 0 chr13 47201627 47201667 -73082645 + GC_rich Low_complexity Low_complexity 1 40 0 4 945 1176 81 0 0 chr13 47203192 47203340 -73080972 + B1_Mus1 SINE Alu 1 148 0 4 945 1933 84 35 31 chr13 47203505 47203823 -73080489 - ORR1A2 LTR MaLR -8 319 1 4 945 336 318 110 83 chr13 47203823 47204279 -73080033 - L2 LINE L2 -1017 2402 1935 4 945 409 299 189 35 chr13 47204453 47204824 -73079488 - LTR16A LTR ERVL -5 446 19 4 945 198 289 19 0 chr13 47204835 47204887 -73079425 - L2 LINE L2 -1721 1698 1646 4 945 419 222 73 18 chr13 47204895 47205005 -73079307 - MLT1A1 LTR MaLR -1 407 292 4 945 249 33 0 0 chr13 47205034 47205064 -73079248 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 945 1349 111 5 0 chr13 47205115 47205305 -73079007 - B2_Mm1a SINE B2 -2 191 1 4 945 223 313 151 27 chr13 47205487 47205825 -73078487 - L2 LINE L2 -1936 1483 1104 4 945 198 0 0 0 chr13 47206760 47206782 -73077530 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 945 249 176 37 12 chr13 47207342 47207428 -73076884 - B1F SINE Alu -8 141 30 4 945 1220 257 22 6 chr13 47207540 47207857 -73076455 + MTE2b LTR MaLR 58 379 0 4 945 1906 294 46 27 chr13 47207861 47208855 -73075457 + MTE2b-int LTR MaLR 5 957 -413 4 945 925 214 163 21 chr13 47208863 47209201 -73075111 + MTE2b-int LTR MaLR 1194 1579 -1 4 945 1024 237 52 134 chr13 47209202 47209568 -73074744 + MTE2b LTR MaLR 1 336 -43 4 945 384 22 0 0 chr13 47209604 47209649 -73074663 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 945 728 173 16 0 chr13 47209654 47209781 -73074531 - B3 SINE B2 -86 130 2 4 945 1194 98 74 6 chr13 47210257 47210432 -73073880 + B2_Mm2 SINE B2 2 188 -7 4 945 183 80 0 0 chr13 47210452 47210477 -73073835 + (A)n Simple_repeat Simple_repeat 1 25 0 4 945 291 318 71 7 chr13 47210701 47210856 -73073456 + MER20 DNA MER1_type 49 213 -6 4 945 941 26 9 0 chr13 47210959 47211075 -73073237 + (TCTCC)n Simple_repeat Simple_repeat 4 120 0 4 945 310 263 42 0 chr13 47211110 47211205 -73073107 - PB1D7 SINE Alu -20 100 2 4 945 257 299 41 0 chr13 47211120 47211217 -73073095 - B4A SINE B4 -118 174 74 4 945 204 40 0 0 chr13 47211555 47211580 -73072732 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 945 198 0 0 0 chr13 47211887 47211909 -73072403 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 4 945 701 199 15 0 chr13 47211911 47212047 -73072265 - B1_Mus2 SINE Alu -5 142 5 4 945 800 300 173 22 chr13 47212640 47213005 -73071307 + MLT2B1 LTR ERVL 37 456 -64 4 945 1372 90 21 0 chr13 47213118 47213306 -73071006 - B2_Mm2 SINE B2 -3 192 1 4 945 600 302 6 0 chr13 47213354 47213516 -73070796 + RSINE1 SINE B4 3 165 0 4 945 259 276 66 0 chr13 47213551 47213627 -73070685 + MER2 DNA MER2_type 81 161 -184 4 945 277 293 141 0 chr13 47213667 47213766 -73070546 + PB1D10 SINE Alu 5 117 0 4 945 312 269 21 0 chr13 47213781 47213874 -73070438 + MER2 DNA MER2_type 212 306 -39 4 945 252 77 0 0 chr13 47214026 47214065 -73070247 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 945 1323 90 26 21 chr13 47214084 47214277 -73070035 + B2_Mm2 SINE B2 2 195 0 4 945 2033 81 89 23 chr13 47214333 47214637 -73069675 - ORR1A2 LTR MaLR 0 327 4 4 945 5836 157 173 39 chr13 47214637 47214830 -73069482 - ORR1A2-int LTR MaLR -3 1960 1768 4 945 204 40 0 0 chr13 47214830 47214855 -73069457 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 5 945 5836 157 173 39 chr13 47214855 47216085 -73068227 - ORR1A2-int LTR MaLR -196 1767 347 4 945 711 130 130 0 chr13 47216093 47216224 -73068088 - B1_Mur3 SINE Alu 0 149 2 5 945 643 177 0 0 chr13 47216480 47216593 -73067719 + B1_Mm SINE Alu 2 114 -33 5 945 210 37 0 0 chr13 47216605 47216632 -73067680 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 945 225 0 0 0 chr13 47218898 47218923 -73065389 + (A)n Simple_repeat Simple_repeat 1 25 0 5 945 207 69 0 0 chr13 47219430 47219459 -73064853 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 945 2511 132 45 7 chr13 47219839 47220265 -73064047 + RMER10A LTR ERVL 1 442 0 5 945 207 206 63 0 chr13 47221047 47221110 -73063202 + (CCCA)n Simple_repeat Simple_repeat 3 69 0 5 945 954 215 33 33 chr13 47222470 47222682 -73061630 + B3 SINE B2 5 216 0 5 945 899 233 152 36 chr13 47223192 47223526 -73060786 + MTEb LTR MaLR 7 379 0 5 945 350 181 14 14 chr13 47223526 47223570 -73060742 + MER20B DNA MER1_type 733 776 -7 5 945 1063 119 11 0 chr13 47223937 47224113 -73060199 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 5 945 656 271 8 57 chr13 47224124 47224317 -73059995 - ID_B1 SINE B4 0 224 41 5 945 274 221 29 29 chr13 47224363 47224433 -73059879 - ORR1D2 LTR MaLR -6 364 295 5 945 342 0 0 0 chr13 47225522 47225560 -73058752 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 5 945 899 43 0 17 chr13 47225569 47225687 -73058625 - B2_Mm2 SINE B2 -78 117 2 5 945 258 369 102 49 chr13 47225704 47225929 -73058383 + LTR78 LTR ERV1 204 440 -864 5 945 266 310 0 0 chr13 47225984 47226055 -73058257 + LTR78 LTR ERV1 519 589 -715 5 945 213 154 0 0 chr13 47226274 47226313 -73057999 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 945 511 238 2 19 chr13 47226319 47226437 -73057875 - B1_Mus1 SINE Alu -31 117 1 5 945 789 291 96 56 chr13 47226756 47227219 -73057093 - MLT2B1 LTR ERVL -5 557 1 5 945 272 329 66 0 chr13 47227219 47227293 -73057019 + LTR78 LTR ERV1 1226 1304 0 5 945 1265 80 103 0 chr13 47227407 47227582 -73056730 - B2_Mm2 SINE B2 0 195 3 5 945 438 241 127 24 chr13 47228475 47228641 -73055671 - B4A SINE B4 -1 291 109 5 945 643 222 0 36 chr13 47228699 47228839 -73055473 - B1_Mur1 SINE Alu 0 149 15 5 945 2040 183 41 26 chr13 47228842 47229257 -73055055 + MTC LTR MaLR 1 421 0 5 945 257 356 53 1 chr13 47229271 47229370 -73054942 - PB1D7 SINE Alu -6 114 12 5 945 362 324 63 29 chr13 47230142 47230445 -73053867 - MTEb LTR MaLR 0 379 57 5 945 992 156 176 5 chr13 47230894 47231087 -73053225 + URR1A DNA MER1_type 1 226 0 5 945 267 234 0 58 chr13 47232599 47232685 -73051627 - ID4_ SINE ID 0 83 3 5 945 1276 237 77 12 chr13 47233013 47233350 -73050962 - ORR1E LTR MaLR 0 359 1 5 945 1400 89 11 0 chr13 47233515 47233706 -73050606 - B2_Mm1t SINE B2 0 193 1 5 945 1868 138 159 3 chr13 47233936 47234263 -73050049 + ORR1C1 LTR MaLR 1 378 0 5 945 4932 178 244 20 chr13 47234263 47235493 -73048819 + ORR1C1-int LTR MaLR 1 1505 -4 5 945 1546 173 166 9 chr13 47235497 47235823 -73048489 + ORR1C1 LTR MaLR 1 377 -1 5 945 562 264 87 44 chr13 47235855 47236061 -73048251 + ID_B1 SINE B4 10 224 0 5 945 897 257 5 10 chr13 47236183 47236376 -73047936 - B3A SINE B2 -6 192 1 5 945 528 59 0 0 chr13 47236391 47236459 -73047853 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 945 556 279 47 79 chr13 47236793 47237007 -73047305 + B3 SINE B2 2 208 -8 5 945 2547 64 3 33 chr13 47237012 47237349 -73046963 + ORR1A2 LTR MaLR 1 327 0 5 945 319 261 143 33 chr13 47237481 47237572 -73046740 - PB1 SINE Alu -10 117 17 5 945 393 39 0 0 chr13 47237596 47237647 -73046665 + (TCC)n Simple_repeat Simple_repeat 2 52 0 5 945 659 228 8 0 chr13 47237657 47237784 -73046528 - ID_B1 SINE B4 -8 216 89 5 945 232 336 35 56 chr13 47237658 47237800 -73046512 + YREP_Mm Unknown Unknown 186 324 -1488 5 945 543 163 19 37 chr13 47238554 47238662 -73045650 - PB1D9 SINE Alu -1 119 14 5 945 626 260 77 62 chr13 47238731 47238940 -73045372 + MTEa LTR MaLR 2 213 -166 5 945 246 343 147 34 chr13 47238940 47238969 -73045343 + MLT2B1 LTR ERVL 2 266 -254 5 945 767 126 8 0 chr13 47239021 47239148 -73045164 + (TTTC)n Simple_repeat Simple_repeat 3 130 0 5 945 655 201 7 69 chr13 47240575 47240719 -73043593 + B1_Mur2 SINE Alu 15 149 0 5 945 382 285 13 89 chr13 47242426 47242584 -73041728 - RSINE1 SINE B4 -8 157 12 5 945 544 265 139 109 chr13 47242591 47242921 -73041391 + MTE2a LTR MaLR 13 352 -27 5 945 336 258 11 53 chr13 47242897 47242991 -73041321 - B3 SINE B2 -27 189 100 5 945 610 165 19 0 chr13 47243284 47243387 -73040925 - B1_Mur2 SINE Alu -31 118 14 5 945 655 231 83 57 chr13 47244582 47244775 -73039537 - B3A SINE B2 0 198 1 5 945 194 0 39 0 chr13 47245087 47245113 -73039199 + (TTG)n Simple_repeat Simple_repeat 2 28 0 5 945 1177 37 0 0 chr13 47245113 47245249 -73039063 - B1_Mus2 SINE Alu -10 137 2 5 945 895 354 89 48 chr13 47246262 47246825 -73037487 - BLACKJACK DNA AcHobo -1509 1435 852 5 945 189 0 0 0 chr13 47246825 47246846 -73037466 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 5 945 895 354 89 48 chr13 47246846 47246956 -73037356 - BLACKJACK DNA AcHobo -2093 851 735 5 945 747 348 62 62 chr13 47247272 47247473 -73036839 - BLACKJACK DNA AcHobo -2387 557 364 5 945 510 17 0 0 chr13 47247473 47247532 -73036780 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 5 945 747 348 62 62 chr13 47247532 47247845 -73036467 - BLACKJACK DNA AcHobo -2581 363 44 5 945 492 258 30 55 chr13 47249375 47249539 -73034773 - RSINE1 SINE B4 -1 164 5 5 945 746 154 0 0 chr13 47250943 47251060 -73033252 - B1_Mur2 SINE Alu 0 149 33 5 945 255 208 80 40 chr13 47250999 47251074 -73033238 - 4.5SRNA scRNA scRNA -6 88 11 5 945 644 215 106 39 chr13 47251217 47251440 -73032872 - B2_Mm2 SINE B2 0 216 1 5 945 640 280 0 0 chr13 47251821 47251964 -73032348 - ID_B1 SINE B4 -2 222 80 5 945 469 287 51 6 chr13 47252001 47252159 -73032153 - RSINE1 SINE B4 0 165 1 5 945 276 214 36 0 chr13 47252161 47252217 -73032095 - B1_Mur1 SINE Alu 0 149 92 5 945 786 117 0 0 chr13 47252510 47252630 -73031682 + (TTTC)n Simple_repeat Simple_repeat 3 122 0 5 945 595 286 0 0 chr13 47253179 47253312 -73031000 + ID_B1 SINE B4 92 224 0 5 945 614 146 9 0 chr13 47253313 47253423 -73030889 + GA-rich Low_complexity Low_complexity 2 112 0 5 945 556 113 138 28 chr13 47253640 47253749 -73030563 + B1_Mur3 SINE Alu 28 148 -1 5 945 476 198 82 36 chr13 47253819 47253929 -73030383 - ID_B1 SINE B4 -6 218 104 5 945 308 253 64 32 chr13 47254034 47254128 -73030184 - ID_B1 SINE B4 -55 169 73 5 945 715 317 113 17 chr13 47254327 47254629 -73029683 + MER97c DNA MER1_type? 3 333 -757 5 945 332 251 43 30 chr13 47254635 47254738 -73029574 - ID4_ SINE ID -49 103 7 5 945 553 171 23 6 chr13 47255042 47255218 -73029094 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 945 1170 36 0 0 chr13 47255257 47255394 -73028918 - B1_Mus2 SINE Alu -10 137 1 5 945 182 37 37 0 chr13 47255744 47255771 -73028541 + (TGGGGG)n Simple_repeat Simple_repeat 3 30 0 5 945 522 285 96 59 chr13 47255777 47256010 -73028302 + MER97c DNA MER1_type? 431 681 -409 5 945 1336 88 50 0 chr13 47256010 47256191 -73028121 - B2_Mm2 SINE B2 -5 190 1 5 945 522 282 110 73 chr13 47256191 47256274 -73028038 + MER97c DNA MER1_type? 682 759 -294 5 945 1449 45 0 6 chr13 47256281 47256460 -73027852 + B2_Mm2 SINE B2 15 192 -3 5 945 462 276 26 0 chr13 47256923 47257039 -73027273 - RSINE1 SINE B4 -11 154 36 5 945 203 282 128 0 chr13 47258268 47258346 -73025966 + MIR3 SINE MIR 112 199 -9 5 945 2226 146 38 8 chr13 47258601 47258966 -73025346 - ORR1C2 LTR MaLR -8 376 1 5 945 271 237 119 72 chr13 47260385 47260521 -73023791 + MIRb SINE MIR 88 238 -30 5 945 399 289 42 14 chr13 47260648 47260792 -73023520 + B1F SINE Alu 2 149 0 5 945 291 288 32 76 chr13 47260805 47261027 -73023285 + B4A SINE B4 1 251 -41 5 945 423 0 0 0 chr13 47261033 47261080 -73023232 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 945 306 302 83 54 chr13 47262446 47262719 -73021593 - MTEa LTR MaLR -57 322 39 5 945 969 317 38 22 chr13 47262733 47263049 -73021263 + MLT1A0 LTR MaLR 45 365 0 5 945 1072 262 62 4 chr13 47263303 47263563 -73020749 - MTE2a LTR MaLR -104 275 1 5 945 207 293 0 0 chr13 47264813 47264871 -73019441 + CT-rich Low_complexity Low_complexity 4 61 0 5 945 681 182 95 0 chr13 47264874 47265000 -73019312 - B1_Mur4 SINE Alu -2 148 11 5 945 296 220 16 148 chr13 47264908 47265036 -73019276 - MT2B LTR ERVL -347 254 144 5 945 209 286 56 63 chr13 47265168 47265310 -73019002 + MIR SINE MIR 94 234 -28 5 945 324 243 61 61 chr13 47267102 47267216 -73017096 + PB1D10 SINE Alu 1 114 -3 5 945 4554 142 84 45 chr13 47267264 47268122 -73016190 - RMER19B LTR ERVK -11 891 1 5 945 1482 268 57 53 chr13 47268307 47268855 -73015457 - L1MC3 LINE L1 -170 7615 7066 5 945 538 272 122 50 chr13 47269279 47269558 -73014754 + L1MA5 LINE L1 5987 6285 -15 5 945 289 0 49 0 chr13 47269566 47269607 -73014705 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 945 1045 234 82 57 chr13 47269738 47270079 -73014233 + ORR1E LTR MaLR 13 355 -4 5 945 836 301 80 68 chr13 47270088 47270487 -73013825 + MLT1J LTR MaLR 99 502 -10 5 945 225 0 0 0 chr13 47270583 47270608 -73013704 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 945 518 0 16 0 chr13 47270608 47270669 -73013643 + (GA)n Simple_repeat Simple_repeat 1 63 0 5 945 908 303 36 11 chr13 47270703 47270980 -73013332 - B4A SINE B4 -8 284 1 5 945 896 274 136 18 chr13 47272543 47272881 -73011431 - MTD LTR MaLR -24 395 18 5 945 1484 158 127 71 chr13 47273081 47273207 -73011105 - ORR1D1 LTR MaLR 0 374 244 6 945 243 0 0 0 chr13 47273207 47273234 -73011078 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 6 945 1484 158 127 71 chr13 47273234 47273461 -73010851 - ORR1D1 LTR MaLR -131 243 3 6 945 840 170 19 19 chr13 47274049 47274211 -73010101 + ORR1D1 LTR MaLR 147 308 -66 6 945 512 232 0 7 chr13 47274270 47274422 -73009890 + CT-rich Low_complexity Low_complexity 3 153 0 6 945 610 230 79 0 chr13 47274422 47274561 -73009751 - B4 SINE B4 -61 231 82 6 945 385 289 172 8 chr13 47275078 47275200 -73009112 - RSINE1 SINE B4 -17 148 7 6 945 294 234 109 31 chr13 47275304 47275432 -73008880 + MLT1A1 LTR MaLR 268 405 -3 6 945 1657 315 96 0 chr13 47275922 47276548 -73007764 + Lx8 LINE L1 6600 7285 -188 6 945 828 309 40 59 chr13 47276767 47277309 -73007003 - MER54B LTR ERVL -23 770 196 6 945 353 316 42 0 chr13 47278102 47278197 -73006115 - PB1D10 SINE Alu -7 110 12 6 945 495 48 0 0 chr13 47278378 47278440 -73005872 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 945 261 390 68 7 chr13 47278832 47278979 -73005333 + MamRep1161 DNA TcMar 9 164 -793 6 945 248 254 45 0 chr13 47280142 47280209 -73004103 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 6 945 376 171 43 0 chr13 47281126 47281196 -73003116 + B1_Mus1 SINE Alu 33 105 -43 6 945 289 237 119 40 chr13 47281196 47281227 -73003085 + B4 SINE B4 117 225 -67 6 945 222 208 0 0 chr13 47281232 47281280 -73003032 + G-rich Low_complexity Low_complexity 3 50 0 6 945 495 0 0 0 chr13 47281294 47281349 -73002963 + (GGA)n Simple_repeat Simple_repeat 2 56 0 6 945 930 119 20 20 chr13 47281370 47281516 -73002796 - B1_Mus1 SINE Alu -2 146 1 6 945 252 178 98 110 chr13 47281541 47281623 -73002689 + MIRb SINE MIR 179 259 -9 6 945 819 0 0 0 chr13 47282235 47282326 -73001986 + (TC)n Simple_repeat Simple_repeat 1 91 0 6 945 465 270 34 110 chr13 47282326 47282554 -73001758 - ID_B1 SINE B4 -12 212 1 6 945 298 221 0 29 chr13 47282599 47282669 -73001643 - ID4_ SINE ID -13 70 3 6 945 237 323 82 30 chr13 47283432 47283566 -73000746 + BLACKJACK DNA AcHobo 73 213 -2731 6 945 310 250 113 64 chr13 47283748 47283889 -73000423 + BLACKJACK DNA AcHobo 311 458 -2486 6 945 948 296 191 72 chr13 47283862 47284512 -72999800 + BLACKJACK DNA AcHobo 594 1320 -1624 6 945 262 163 0 125 chr13 47284557 47284613 -72999699 - ID_B1 SINE B4 -2 222 174 6 945 344 281 70 40 chr13 47284563 47284663 -72999649 - PB1D10 SINE Alu -8 109 7 6 945 420 259 92 9 chr13 47284721 47284830 -72999482 - RSINE1 SINE B4 -38 127 10 6 945 424 274 0 15 chr13 47285000 47285116 -72999196 - B1F SINE Alu -9 111 1 6 945 1060 205 25 10 chr13 47285727 47285929 -72998383 - B3 SINE B2 -9 207 3 6 945 1500 0 0 13 chr13 47286068 47286295 -72998017 + (TTC)n Simple_repeat Simple_repeat 1 224 0 6 945 1085 72 52 13 chr13 47286297 47286451 -72997861 - B2_Mm2 SINE B2 -27 168 9 6 945 330 206 0 0 chr13 47287195 47287268 -72997044 + CT-rich Low_complexity Low_complexity 4 76 0 6 945 868 169 0 17 chr13 47287269 47287301 -72997011 + polypyrimidine Low_complexity Low_complexity 147 178 0 6 945 1142 62 14 0 chr13 47287301 47287446 -72996866 - B1_Mm SINE Alu 0 147 1 6 945 868 169 0 17 chr13 47287446 47287593 -72996719 + polypyrimidine Low_complexity Low_complexity 2 146 0 6 945 783 143 79 0 chr13 47288127 47288253 -72996059 - B1_Mus2 SINE Alu 0 147 12 6 945 210 171 0 0 chr13 47290725 47290766 -72993546 + GA-rich Low_complexity Low_complexity 2 42 0 6 945 261 0 0 0 chr13 47291152 47291181 -72993131 + (T)n Simple_repeat Simple_repeat 1 29 0 6 945 186 43 0 0 chr13 47291260 47291283 -72993029 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 6 945 377 308 112 0 chr13 47292393 47292500 -72991812 - RSINE1 SINE B4 -31 134 16 6 945 560 241 165 0 chr13 47292657 47292827 -72991485 + B3 SINE B2 5 202 -14 6 945 544 257 39 109 chr13 47292955 47293172 -72991140 - B3A SINE B2 -6 210 2 6 945 758 244 24 6 chr13 47294267 47294349 -72989963 + ID SINE ID 1 85 -139 6 945 351 237 61 10 chr13 47294349 47294447 -72989865 + PB1D10 SINE Alu 3 105 -12 6 945 525 295 58 6 chr13 47295933 47296107 -72988205 + B3A SINE B2 15 197 -1 6 945 418 235 54 87 chr13 47296141 47296290 -72988022 + RSINE1 SINE B4 3 146 -19 6 945 254 29 29 0 chr13 47296327 47296362 -72987950 + (CAA)n Simple_repeat Simple_repeat 2 37 0 6 945 428 239 222 18 chr13 47296382 47296589 -72987723 + MER2 DNA MER2_type 93 343 -2 6 945 633 188 5 14 chr13 47297132 47297350 -72986962 + (CA)n Simple_repeat Simple_repeat 1 215 0 6 945 1610 164 107 12 chr13 47298123 47298477 -72985835 - MTC LTR MaLR 0 400 7 6 945 604 0 26 0 chr13 47298754 47298830 -72985482 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 6 945 869 143 15 0 chr13 47299443 47299576 -72984736 + B1_Mur2 SINE Alu 1 135 -14 6 945 255 61 0 0 chr13 47299577 47299610 -72984702 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 6 945 260 352 112 0 chr13 47299693 47299818 -72984494 + RSINE1 SINE B4 5 143 -22 6 945 513 32 0 0 chr13 47299818 47299881 -72984431 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 945 948 84 0 0 chr13 47300008 47300139 -72984173 + (TTCC)n Simple_repeat Simple_repeat 1 131 0 6 945 303 232 167 29 chr13 47300159 47300261 -72984051 - PB1D10 SINE Alu -1 116 1 6 945 257 298 181 0 chr13 47300183 47300277 -72984035 - ID_B1 SINE B4 -48 176 66 6 945 381 95 0 0 chr13 47300478 47300541 -72983771 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 6 945 475 280 6 107 chr13 47301355 47301523 -72982789 - L1M3 LINE L1 -404 5767 5617 6 945 918 53 22 8 chr13 47301659 47301793 -72982519 - L1Md_F2 LINE L1 -1 6581 6446 6 945 618 269 17 28 chr13 47301848 47302137 -72982175 - ORR1E LTR MaLR 0 359 4 6 945 517 280 109 22 chr13 47302252 47302482 -72981830 - L1MA7 LINE L1 -80 6211 5962 6 945 333 203 120 75 chr13 47303076 47303209 -72981103 - B1F1 SINE Alu -8 141 3 6 945 268 346 24 63 chr13 47303611 47303753 -72980559 - L2a LINE L2 0 3426 3238 6 945 1076 131 0 40 chr13 47303764 47303939 -72980373 + URR1A DNA MER1_type 59 226 0 6 945 216 0 0 0 chr13 47304369 47304393 -72979919 + (T)n Simple_repeat Simple_repeat 1 24 0 6 945 350 174 0 42 chr13 47304919 47304991 -72979321 + B3A SINE B2 1 69 -129 6 945 25 31 0 0 chr13 47305003 47305035 -72979277 + AT_rich Low_complexity Low_complexity 1 32 0 6 945 943 179 137 0 chr13 47305038 47305228 -72979084 - B3 SINE B2 0 216 1 6 945 1835 133 7 217 chr13 47305688 47306149 -72978163 - ORR1B2 LTR MaLR -3 364 1 6 945 252 143 0 0 chr13 47306161 47306203 -72978109 + (T)n Simple_repeat Simple_repeat 1 42 0 6 945 553 275 49 0 chr13 47306203 47306345 -72977967 - B1F SINE Alu 0 149 1 6 945 372 43 0 0 chr13 47306881 47306927 -72977385 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 945 483 18 0 0 chr13 47306931 47306987 -72977325 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 945 405 109 0 0 chr13 47307454 47307518 -72976794 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 945 408 299 16 65 chr13 47309213 47309399 -72974913 + MTEb LTR MaLR 203 379 0 6 945 831 48 0 0 chr13 47309671 47309775 -72974537 + (TTC)n Simple_repeat Simple_repeat 2 105 0 6 945 351 124 0 39 chr13 47309792 47309859 -72974453 - B2_Mm2 SINE B2 -107 109 47 6 945 1198 125 11 0 chr13 47309906 47310082 -72974230 - B2_Mm1t SINE B2 -14 179 2 6 945 204 97 0 0 chr13 47310277 47310308 -72974004 + (TCC)n Simple_repeat Simple_repeat 1 31 0 6 945 228 208 12 49 chr13 47311023 47311104 -72973208 + Lx7 LINE L1 7606 7683 -13 6 945 477 0 0 0 chr13 47312125 47312178 -72972134 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 945 216 162 73 0 chr13 47312207 47312275 -72972037 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 6 945 180 70 70 0 chr13 47312341 47312384 -72971928 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 6 945 334 276 98 63 chr13 47314280 47314423 -72969889 - L1ME4a LINE L1 -249 5875 5728 6 945 189 0 0 0 chr13 47314851 47314872 -72969440 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6 945 388 388 13 32 chr13 47314962 47315119 -72969193 - MER2B DNA MER2_type 0 336 183 6 945 1245 143 16 0 chr13 47315325 47315514 -72968798 - B2_Mm2 SINE B2 -2 193 2 6 945 277 285 150 21 chr13 47316673 47316813 -72967499 - MIRb SINE MIR -65 203 46 6 946 195 139 0 0 chr13 47317167 47317203 -72967109 + (CACCC)n Simple_repeat Simple_repeat 1 36 0 6 946 969 151 31 41 chr13 47317325 47317344 -72966968 - B2_Mm2 SINE B2 -2 193 175 6 946 243 0 0 0 chr13 47317344 47317371 -72966941 + (TATG)n Simple_repeat Simple_repeat 2 28 0 6 946 969 151 31 41 chr13 47317371 47317545 -72966767 - B2_Mm2 SINE B2 -21 174 3 6 946 474 314 40 40 chr13 47317926 47318128 -72966184 - MER3 DNA MER1_type -7 202 1 6 946 609 52 0 0 chr13 47318378 47318455 -72965857 + (TCTCCC)n Simple_repeat Simple_repeat 3 79 0 6 946 342 115 0 0 chr13 47318455 47318507 -72965805 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 946 340 263 128 74 chr13 47319870 47319923 -72964389 + MamRep1879 DNA hAT? 8 71 -145 6 946 538 27 13 26 chr13 47319923 47320000 -72964312 + (GGA)n Simple_repeat Simple_repeat 1 76 0 6 946 340 263 128 74 chr13 47320000 47320094 -72964218 + MamRep1879 DNA hAT? 72 163 -53 6 946 204 40 0 0 chr13 47320905 47320930 -72963382 + (T)n Simple_repeat Simple_repeat 1 25 0 6 946 878 302 85 70 chr13 47321377 47321779 -72962533 + MER54A LTR ERVL 18 425 -476 6 946 207 0 0 0 chr13 47321779 47321802 -72962510 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 946 375 23 0 0 chr13 47321802 47321846 -72962466 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 946 764 263 3 19 chr13 47321958 47322144 -72962168 + B3A SINE B2 2 173 -20 7 946 426 304 112 70 chr13 47322192 47322719 -72961593 + L1MD3 LINE L1 7431 7979 -16 7 946 597 128 231 0 chr13 47323183 47323300 -72961012 + B1_Mur4 SINE Alu 2 145 -5 7 946 279 0 0 0 chr13 47326050 47326081 -72958231 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 946 1012 82 0 43 chr13 47326081 47326221 -72958091 - B1_Mus1 SINE Alu -10 138 5 7 946 196 190 119 17 chr13 47327759 47327818 -72956494 + L3 LINE CR1 2132 2196 -2293 7 946 228 67 0 0 chr13 47327914 47327944 -72956368 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 7 946 22 56 0 0 chr13 47328065 47328101 -72956211 + AT_rich Low_complexity Low_complexity 1 36 0 7 946 444 329 187 19 chr13 47328807 47329064 -72955248 + MER2 DNA MER2_type 1 300 -45 7 946 213 207 0 159 chr13 47330022 47330039 -72954273 - B4 SINE B4 -150 142 86 7 946 258 163 39 39 chr13 47330039 47330090 -72954222 - PB1D7 SINE Alu -69 51 1 7 946 259 292 35 70 chr13 47330175 47330289 -72954023 + RSINE1 SINE B4 12 121 -44 7 946 21 0 0 0 chr13 47330528 47330549 -72953763 + AT_rich Low_complexity Low_complexity 1 21 0 7 946 308 355 36 22 chr13 47330896 47331034 -72953278 - MLT1L LTR MaLR -2 608 469 7 946 192 261 42 83 chr13 47331350 47331446 -72952866 - L3 LINE CR1 -197 4292 4201 7 946 545 171 0 18 chr13 47333225 47333338 -72950974 + (TATG)n Simple_repeat Simple_repeat 2 112 0 7 946 187 318 74 44 chr13 47333909 47334044 -72950268 + MIRc SINE MIR 23 161 -107 7 946 471 63 0 0 chr13 47334058 47334121 -72950191 + (TG)n Simple_repeat Simple_repeat 2 64 0 7 946 642 222 40 0 chr13 47334141 47334176 -72950136 - RSINE1 SINE B4 -32 133 99 7 946 1158 35 0 0 chr13 47334176 47334319 -72949993 + (CTTTG)n Simple_repeat Simple_repeat 2 144 0 7 946 642 222 40 0 chr13 47334319 47334409 -72949903 - RSINE1 SINE B4 -67 98 4 7 946 429 342 30 55 chr13 47335668 47335903 -72948409 - MLT1D LTR MaLR -7 498 270 7 946 1721 181 57 28 chr13 47336391 47336743 -72947569 - MTC LTR MaLR -1 420 59 7 946 759 223 25 47 chr13 47336861 47337096 -72947216 - RLTR15 LTR ERVK -129 230 1 7 946 293 248 35 85 chr13 47338969 47339095 -72945217 - MLT1B LTR MaLR -24 443 271 7 946 812 250 73 108 chr13 47339106 47339447 -72944865 - MTEa LTR MaLR -50 329 1 7 946 261 235 0 19 chr13 47339453 47339505 -72944807 - MLT1B LTR MaLR -143 222 172 7 946 290 183 0 14 chr13 47344640 47344712 -72939600 + (TA)n Simple_repeat Simple_repeat 2 72 0 7 946 266 0 29 0 chr13 47345335 47345369 -72938943 + (TC)n Simple_repeat Simple_repeat 1 35 0 7 946 988 160 160 0 chr13 47346383 47346577 -72937735 + URR1A DNA MER1_type 1 225 -1 7 946 515 151 12 0 chr13 47346666 47346752 -72937560 + RMER15 LTR ERVL 1 87 -488 7 946 1550 242 44 12 chr13 47347222 47347565 -72936747 + RMER15-int LTR ERVL 4416 4769 -230 7 946 412 244 0 11 chr13 47347606 47347697 -72936615 + RMER15-int LTR ERVL 4872 4961 -38 7 946 3215 153 35 38 chr13 47347697 47348274 -72936038 + RMER15 LTR ERVL 1 575 0 7 946 615 240 181 48 chr13 47348525 47348713 -72935599 - ID_B1 SINE B4 -11 213 1 7 946 350 306 161 32 chr13 47348926 47349112 -72935200 - ID_B1 SINE B4 -13 211 2 7 946 2419 154 186 16 chr13 47349928 47350246 -72934066 - RLTR25B LTR ERVK 0 1028 623 7 946 2189 84 97 0 chr13 47350246 47350544 -72933768 + ORR1A2 LTR MaLR 1 327 0 7 946 2419 154 186 16 chr13 47350544 47350720 -72933592 - RLTR25B LTR ERVK -406 622 450 7 946 1193 116 3 3 chr13 47350860 47351216 -72933096 + (TTCC)n Simple_repeat Simple_repeat 1 356 0 7 946 517 266 47 99 chr13 47351262 47351408 -72932904 - RSINE1 SINE B4 -2 163 23 7 946 934 133 201 5 chr13 47351408 47351597 -72932715 + URR1A DNA MER1_type 1 226 0 7 946 517 266 47 99 chr13 47351597 47351621 -72932691 - RSINE1 SINE B4 -143 22 2 7 946 428 338 23 0 chr13 47351644 47351777 -72932535 - B1F2 SINE Alu -10 139 4 7 946 1071 99 0 0 chr13 47351845 47351986 -72932326 - B1_Mus2 SINE Alu -2 145 5 7 946 219 69 0 0 chr13 47352676 47352705 -72931607 + (TTAGGC)n Simple_repeat Simple_repeat 1 29 0 7 946 312 262 234 0 chr13 47352891 47353032 -72931280 - HAL1-3A_ME LINE L1 -419 2439 2266 7 946 325 296 95 39 chr13 47353136 47353315 -72930997 - B4A SINE B4 -103 189 1 7 946 252 0 0 0 chr13 47354633 47354661 -72929651 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 7 946 288 298 67 9 chr13 47354978 47355083 -72929229 - PB1D10 SINE Alu -2 115 5 7 946 1119 89 0 14 chr13 47355110 47355258 -72929054 - B1_Mus1 SINE Alu -1 147 2 7 946 376 307 27 87 chr13 47355399 47355549 -72928763 - B4A SINE B4 -118 174 34 7 946 2178 177 19 29 chr13 47355552 47355971 -72928341 + MTC LTR MaLR 7 421 0 7 946 713 285 70 0 chr13 47356319 47356491 -72927821 + B3 SINE B2 2 185 -31 7 946 204 245 0 0 chr13 47356510 47356563 -72927749 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 946 276 91 0 0 chr13 47356577 47356621 -72927691 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 946 350 291 12 0 chr13 47356973 47357059 -72927253 - B1F1 SINE Alu -59 90 4 7 946 330 26 0 0 chr13 47357077 47357116 -72927196 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 946 804 147 0 0 chr13 47357816 47357952 -72926360 + (TTTC)n Simple_repeat Simple_repeat 3 138 0 7 946 671 296 18 18 chr13 47357952 47358176 -72926136 - ID_B1 SINE B4 0 224 1 7 946 284 250 0 0 chr13 47358231 47358295 -72926017 - B3A SINE B2 -133 65 2 7 946 32 19 0 37 chr13 47358861 47358883 -72925429 + AT_rich Low_complexity Low_complexity 1 22 0 7 946 1224 55 0 0 chr13 47358883 47359029 -72925283 - B1_Mus2 SINE Alu 0 147 2 7 946 32 19 0 37 chr13 47359029 47359060 -72925252 + AT_rich Low_complexity Low_complexity 1 30 0 7 946 328 297 0 0 chr13 47359078 47359152 -72925160 - RSINE1 SINE B4 -53 112 39 7 946 858 262 37 5 chr13 47359529 47359744 -72924568 + ID_B1 SINE B4 3 224 0 7 946 217 116 0 104 chr13 47360951 47360999 -72923313 + (GGGTG)n Simple_repeat Simple_repeat 4 46 0 7 946 1472 51 17 0 chr13 47361113 47361289 -72923023 - B2_Mm2 SINE B2 -14 181 3 7 946 670 190 83 37 chr13 47362188 47362429 -72921883 + Lx9 LINE L1 7386 7637 -7 7 946 1195 262 72 23 chr13 47362687 47362992 -72921320 + MTE2b LTR MaLR 3 322 -57 7 946 299 222 0 12 chr13 47362993 47363075 -72921237 + CT-rich Low_complexity Low_complexity 3 83 0 7 946 656 259 49 6 chr13 47364009 47364172 -72920140 - MER58A DNA MER1_type -16 208 39 7 946 1489 74 5 0 chr13 47364254 47364444 -72919868 - B2_Mm1a SINE B2 -2 191 1 7 946 875 173 0 0 chr13 47364663 47364802 -72919510 - B1_Mus2 SINE Alu -8 139 1 7 946 231 143 0 0 chr13 47364803 47364838 -72919474 - ORR1D1 LTR MaLR -6 368 334 7 946 685 220 47 106 chr13 47365281 47365608 -72918704 - ORR1D1 LTR MaLR -23 347 55 7 946 2436 140 11 33 chr13 47365608 47366058 -72918254 + RMER10A LTR ERVL 1 440 -2 7 946 410 125 15 30 chr13 47366060 47366126 -72918186 - ORR1D1 LTR MaLR -309 65 1 7 946 696 269 0 43 chr13 47366343 47366506 -72917806 + B3A SINE B2 2 157 -41 7 946 352 231 0 52 chr13 47366976 47367072 -72917240 + RSINE1 SINE B4 2 92 -73 7 946 969 113 50 0 chr13 47367072 47367213 -72917099 + B1_Mus1 SINE Alu 1 148 0 7 946 1221 77 0 0 chr13 47367808 47367978 -72916334 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 7 946 256 279 96 0 chr13 47369321 47369425 -72914887 - L1MA5 LINE L1 -23 6277 6164 7 946 216 86 0 0 chr13 47369481 47369516 -72914796 + (T)n Simple_repeat Simple_repeat 1 35 0 7 946 1320 182 45 86 chr13 47369520 47369712 -72914600 - RMER17C LTR ERVK -29 381 187 7 946 414 0 0 0 chr13 47369712 47369758 -72914554 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 946 1320 182 45 86 chr13 47369758 47369962 -72914350 - RMER17C LTR ERVK -224 186 1 7 946 232 251 196 35 chr13 47369964 47370137 -72914175 - L1MA5 LINE L1 -44 6256 6056 7 946 748 237 117 52 chr13 47370157 47370225 -72914087 - B4A SINE B4 -2 290 222 7 946 390 42 0 0 chr13 47370225 47370273 -72914039 + (TATG)n Simple_repeat Simple_repeat 2 49 0 7 946 596 200 0 0 chr13 47370273 47370383 -72913929 - PB1D9 SINE Alu -10 110 1 7 946 748 237 117 52 chr13 47370383 47370544 -72913768 - B4A SINE B4 -71 221 46 7 946 2542 135 171 33 chr13 47370914 47371428 -72912884 + RMER4B LTR ERVK 1 585 0 7 946 396 264 36 18 chr13 47371651 47371763 -72912549 - B4A SINE B4 -19 273 160 7 946 30 45 0 0 chr13 47371812 47371856 -72912456 + AT_rich Low_complexity Low_complexity 1 44 0 7 946 194 57 57 0 chr13 47371859 47371894 -72912418 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 7 946 370 259 0 12 chr13 47371914 47371996 -72912316 - B4A SINE B4 -201 91 11 7 946 691 262 60 0 chr13 47372032 47372215 -72912097 - B3A SINE B2 0 198 5 7 946 746 233 62 16 chr13 47372274 47372466 -72911846 - B3 SINE B2 -15 201 1 7 946 294 320 108 47 chr13 47372466 47372679 -72911633 - B4 SINE B4 -65 227 2 7 946 282 87 0 0 chr13 47375048 47375094 -72909218 + (T)n Simple_repeat Simple_repeat 1 46 0 7 946 387 60 0 0 chr13 47375721 47375771 -72908541 + (CAA)n Simple_repeat Simple_repeat 2 51 0 7 946 411 21 0 0 chr13 47377192 47377240 -72907072 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 946 2051 125 39 104 chr13 47377681 47378065 -72906247 + ORR1B2 LTR MaLR 1 359 -8 7 946 547 240 247 26 chr13 47378347 47378578 -72905734 + RMER15 LTR ERVL 275 556 -19 7 946 400 265 207 95 chr13 47378683 47379002 -72905310 - MLT1A LTR MaLR -32 358 1 7 946 26 0 0 0 chr13 47380447 47380473 -72903839 + AT_rich Low_complexity Low_complexity 1 26 0 7 946 521 260 78 16 chr13 47382115 47382244 -72902068 - ID_B1 SINE B4 0 224 88 7 946 518 55 27 0 chr13 47382260 47382333 -72901979 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 7 946 240 59 0 0 chr13 47382338 47382372 -72901940 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 7 946 950 89 22 22 chr13 47382372 47382510 -72901802 - B2_Mm2 SINE B2 -57 138 1 8 946 554 246 103 0 chr13 47382837 47382963 -72901349 + B1F SINE Alu 1 139 -10 8 946 270 0 0 0 chr13 47384517 47384547 -72899765 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 8 946 507 198 17 59 chr13 47384549 47384667 -72899645 + PB1D9 SINE Alu 1 113 -7 8 946 190 149 45 0 chr13 47384671 47384738 -72899574 + A-rich Low_complexity Low_complexity 1 70 0 8 946 435 19 0 0 chr13 47384767 47384819 -72899493 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 946 441 259 0 0 chr13 47385079 47385187 -72899125 - RSINE1 SINE B4 -33 132 25 8 946 404 264 52 76 chr13 47385418 47385590 -72898722 + MER5A DNA MER1_type 16 183 -6 8 946 533 324 26 39 chr13 47385646 47385800 -72898512 - RSINE1 SINE B4 0 165 14 8 946 877 199 13 108 chr13 47385900 47386131 -72898181 - B3 SINE B2 -7 209 1 8 946 270 182 0 52 chr13 47386930 47386988 -72897324 + PB1D9 SINE Alu 1 55 -65 8 946 646 189 14 64 chr13 47386936 47387077 -72897235 + ID_B1 SINE B4 88 221 -3 8 946 423 0 0 0 chr13 47387241 47387288 -72897024 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 946 768 278 32 32 chr13 47387297 47387371 -72896941 + B3 SINE B2 1 69 -147 8 946 3599 188 72 69 chr13 47387371 47387759 -72896553 + RMER17B LTR ERVK 1 431 -527 8 946 378 0 0 0 chr13 47387759 47387801 -72896511 + (TC)n Simple_repeat Simple_repeat 2 43 0 8 946 3599 188 72 69 chr13 47387801 47388367 -72895945 + RMER17B LTR ERVK 432 958 0 8 946 529 278 39 39 chr13 47388367 47388508 -72895804 + B3 SINE B2 70 216 0 8 946 270 0 0 0 chr13 47389710 47389740 -72894572 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 946 492 95 0 0 chr13 47389903 47389987 -72894325 + (CAGG)n Simple_repeat Simple_repeat 2 85 0 8 946 1117 70 0 21 chr13 47390912 47391049 -72893263 + B1_Mus2 SINE Alu 1 137 -10 8 946 291 54 0 0 chr13 47391049 47391086 -72893226 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 8 946 4313 21 0 0 chr13 47391139 47391621 -72892691 + LTRIS_Mm LTR ERV1 1 482 0 8 946 222 238 169 31 chr13 47392336 47392401 -72891911 - RSINE1 SINE B4 0 165 92 8 946 219 241 21 151 chr13 47392425 47392518 -72891794 - PB1D7 SINE Alu -32 88 8 8 946 585 248 60 0 chr13 47392685 47392818 -72891494 - ID_B1 SINE B4 -3 221 81 8 946 625 89 0 29 chr13 47393153 47393257 -72891055 + (TCCCC)n Simple_repeat Simple_repeat 2 102 0 8 946 365 250 0 0 chr13 47393258 47393334 -72890978 - ID_B1 SINE B4 -20 204 129 8 946 414 250 75 69 chr13 47393339 47393498 -72890814 - B4A SINE B4 -130 162 3 8 946 283 207 283 9 chr13 47394006 47394112 -72890200 + RSINE1 SINE B4 2 136 -29 8 946 986 130 0 14 chr13 47394171 47394319 -72889993 + B1_Mus2 SINE Alu 1 146 -1 8 946 671 112 21 7 chr13 47394319 47394463 -72889849 + (CAACC)n Simple_repeat Simple_repeat 5 150 0 8 946 1233 295 17 0 chr13 47394799 47395152 -72889160 + MTE2b LTR MaLR 1 359 -20 8 946 300 186 0 0 chr13 47395600 47395659 -72888653 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 946 315 0 0 0 chr13 47396030 47396065 -72888247 + (T)n Simple_repeat Simple_repeat 1 35 0 8 946 374 226 15 154 chr13 47396401 47396537 -72887775 + PB1D10 SINE Alu 1 117 0 8 946 231 114 0 0 chr13 47396911 47396946 -72887366 + (GGAGAA)n Simple_repeat Simple_repeat 3 37 0 8 946 317 250 65 0 chr13 47396993 47397085 -72887227 + B1F SINE Alu 51 148 -1 8 946 1634 157 127 14 chr13 47397532 47397893 -72886419 + MTD LTR MaLR 18 419 0 8 946 1028 238 49 65 chr13 47397900 47398500 -72885812 + MTD-int LTR MaLR 14 685 -573 8 946 547 324 138 17 chr13 47398500 47398855 -72885457 + MTD-int LTR MaLR 1171 1568 -12 8 946 368 260 92 20 chr13 47398866 47399019 -72885293 + MTD LTR MaLR 1 164 -257 8 946 429 165 0 0 chr13 47399002 47399087 -72885225 - B3 SINE B2 -131 85 1 8 946 327 104 0 0 chr13 47399206 47399254 -72885058 + (A)n Simple_repeat Simple_repeat 1 48 0 8 946 237 243 0 0 chr13 47399457 47399527 -72884785 + CT-rich Low_complexity Low_complexity 3 72 0 8 946 238 295 0 0 chr13 47399543 47399571 -72884741 + polypyrimidine Low_complexity Low_complexity 35 62 0 8 946 1283 69 6 0 chr13 47399571 47399746 -72884566 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 8 946 238 295 0 0 chr13 47399746 47399778 -72884534 + polypyrimidine Low_complexity Low_complexity 3 34 0 8 946 555 160 0 0 chr13 47399778 47399872 -72884440 - BC1_Mm scRNA scRNA -58 94 1 8 946 288 259 55 69 chr13 47400552 47400697 -72883615 - MER5A DNA MER1_type -32 157 15 8 946 4285 78 28 2 chr13 47400975 47401543 -72882769 - Lx LINE L1 -6 6648 6066 8 946 358 328 15 15 chr13 47401675 47401808 -72882504 + B3A SINE B2 2 134 -64 8 946 30 0 0 0 chr13 47402191 47402221 -72882091 + AT_rich Low_complexity Low_complexity 1 30 0 8 946 200 200 0 0 chr13 47402690 47402725 -72881587 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 946 202 200 0 0 chr13 47403160 47403200 -72881112 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 8 946 2046 105 12 112 chr13 47403208 47403636 -72880676 + RLTR11B LTR ERVK 69 453 0 8 946 672 274 30 118 chr13 47405246 47405297 -72879015 + MTE2b LTR MaLR 2 39 -340 8 946 718 214 208 0 chr13 47405297 47405475 -72878837 + B3 SINE B2 1 215 -1 8 946 700 265 38 68 chr13 47405475 47405754 -72878558 + MTE2b LTR MaLR 40 303 -76 8 946 369 0 0 0 chr13 47407083 47407124 -72877188 + (TA)n Simple_repeat Simple_repeat 1 41 0 8 946 1022 129 0 12 chr13 47408909 47409082 -72875230 + (TTTC)n Simple_repeat Simple_repeat 1 171 0 8 946 1155 219 102 34 chr13 47409239 47409293 -72875019 - MTEa LTR MaLR 0 379 316 8 946 420 20 0 0 chr13 47409293 47409342 -72874970 + (GGAA)n Simple_repeat Simple_repeat 2 50 0 8 946 1155 219 102 34 chr13 47409342 47409641 -72874671 - MTEa LTR MaLR -64 315 4 8 946 700 246 16 60 chr13 47410306 47410488 -72873824 + B4A SINE B4 119 292 0 8 946 670 258 173 24 chr13 47412211 47412465 -72871847 + L1M4c LINE L1 19 310 -6074 8 946 774 262 206 36 chr13 47412464 47413018 -72871294 + L1M4c LINE L1 418 1065 -5319 8 946 21 0 0 0 chr13 47415206 47415227 -72869085 + AT_rich Low_complexity Low_complexity 1 21 0 8 946 1257 90 0 0 chr13 47415746 47415923 -72868389 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 8 946 1003 256 15 19 chr13 47416045 47416312 -72868000 - B4 SINE B4 -26 266 1 8 946 1151 215 11 39 chr13 47416808 47417094 -72867218 - L1_Mur3 LINE L1 -1983 3897 3620 8 946 519 261 78 0 chr13 47417151 47417293 -72867019 + L1_Rod LINE L1 5638 5790 -57 8 946 1431 163 128 10 chr13 47417294 47417591 -72866721 + ORR1C2 LTR MaLR 1 332 -52 8 946 358 193 102 0 chr13 47417605 47417693 -72866619 + MTEb LTR MaLR 282 378 -1 8 946 681 278 3 9 chr13 47418387 47418597 -72865715 + L1_Rod LINE L1 5627 5853 -447 8 946 467 152 13 0 chr13 47418601 47418680 -72865632 + ORR1C2 LTR MaLR 1 80 -304 8 946 257 51 26 0 chr13 47419146 47419185 -72865127 + (TA)n Simple_repeat Simple_repeat 1 40 0 8 946 338 313 22 7 chr13 47419298 47419433 -72864879 - L1M4 LINE L1 -6378 164 28 8 946 501 17 0 0 chr13 47420080 47420138 -72864174 + (GA)n Simple_repeat Simple_repeat 1 58 0 8 946 368 308 25 13 chr13 47420386 47420544 -72863768 - RMER15 LTR ERVL -40 535 376 8 946 22 35 0 0 chr13 47421214 47421243 -72863069 + AT_rich Low_complexity Low_complexity 1 29 0 8 946 234 225 108 43 chr13 47422268 47422361 -72861951 + L1M7 LINE L1 43 141 -6077 8 946 788 224 7 0 chr13 47422363 47422510 -72861802 - B1_Mur1 SINE Alu 0 149 2 8 946 901 129 118 39 chr13 47422515 47422693 -72861619 - B2_Mm2 SINE B2 -2 193 2 8 946 260 342 0 0 chr13 47422891 47422970 -72861342 + MER81 DNA AcHobo 2 80 -34 8 946 218 57 57 0 chr13 47423495 47423530 -72860782 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 8 946 180 111 0 0 chr13 47423615 47423642 -72860670 + (GGGAA)n Simple_repeat Simple_repeat 4 30 0 8 946 565 301 22 28 chr13 47423642 47423890 -72860422 + polypurine Low_complexity Low_complexity 1 246 0 8 946 390 154 83 23 chr13 47423918 47424051 -72860261 + GA-rich Low_complexity Low_complexity 5 145 0 8 946 291 322 91 34 chr13 47424104 47424454 -72859858 + L1M7 LINE L1 988 1357 -4861 8 946 399 244 0 32 chr13 47425304 47425397 -72858915 - RSINE1 SINE B4 -60 105 16 8 946 270 169 105 35 chr13 47425494 47425580 -72858732 - Lx9 LINE L1 -1 7643 7552 8 946 437 110 14 0 chr13 47425597 47425670 -72858642 + (TA)n Simple_repeat Simple_repeat 2 75 0 8 946 4946 226 86 33 chr13 47425670 47426971 -72857341 - Lx9 LINE L1 -168 7476 6107 8 946 1325 209 79 20 chr13 47427323 47427843 -72856469 - Lx9 LINE L1 -1282 6191 5601 8 946 243 0 0 0 chr13 47429934 47429961 -72854351 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 946 242 257 136 9 chr13 47430480 47430590 -72853722 - MER58B DNA MER1_type -45 296 173 8 946 677 275 41 20 chr13 47430890 47431087 -72853225 - ID_B1 SINE B4 -22 202 2 8 946 243 0 0 0 chr13 47432915 47432942 -72851370 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 946 601 261 119 3 chr13 47433100 47433294 -72851018 + B3A SINE B2 1 212 -4 8 946 27 49 0 0 chr13 47433455 47433496 -72850816 + AT_rich Low_complexity Low_complexity 1 41 0 8 946 336 324 127 0 chr13 47433732 47433874 -72850438 + B4A SINE B4 115 274 -18 8 946 225 0 0 0 chr13 47435280 47435305 -72849007 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 946 633 155 0 0 chr13 47435305 47435453 -72848859 + GA-rich Low_complexity Low_complexity 2 149 0 8 946 273 226 0 0 chr13 47435489 47435604 -72848708 + GA-rich Low_complexity Low_complexity 2 116 0 8 946 192 40 0 0 chr13 47435614 47435639 -72848673 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 946 441 84 0 0 chr13 47435646 47435717 -72848595 + (TAGA)n Simple_repeat Simple_repeat 2 72 0 8 946 549 0 0 0 chr13 47436031 47436092 -72848220 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 8 946 4532 70 0 0 chr13 47436114 47436776 -72847536 + L1Md_A LINE L1 1142 1803 -4080 8 946 360 0 0 0 chr13 47437024 47437064 -72847248 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 946 281 47 23 0 chr13 47437064 47437106 -72847206 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 946 25 0 0 0 chr13 47439150 47439175 -72845137 + AT_rich Low_complexity Low_complexity 1 25 0 9 946 279 0 0 0 chr13 47439859 47439890 -72844422 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 9 946 237 277 0 15 chr13 47440018 47440084 -72844228 + (CATG)n Simple_repeat Simple_repeat 1 65 0 9 946 669 211 197 48 chr13 47440197 47440446 -72843866 - B4A SINE B4 -5 287 2 9 946 188 35 35 0 chr13 47440718 47440747 -72843565 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 9 946 189 0 0 0 chr13 47441264 47441285 -72843027 + (T)n Simple_repeat Simple_repeat 1 21 0 9 946 302 164 0 18 chr13 47441916 47441972 -72842340 - B4 SINE B4 -196 96 42 9 946 26 0 0 0 chr13 47441978 47442004 -72842308 + AT_rich Low_complexity Low_complexity 1 26 0 9 946 1789 188 76 66 chr13 47442004 47442426 -72841886 - Lx5 LINE L1 -3 7047 6622 9 946 1367 83 0 16 chr13 47442529 47442712 -72841600 - B2_Mm2 SINE B2 -14 181 2 9 946 386 248 181 0 chr13 47442892 47443025 -72841287 + B3 SINE B2 7 163 -53 9 946 359 89 0 18 chr13 47443026 47443083 -72841229 + (CATA)n Simple_repeat Simple_repeat 1 56 0 9 946 310 293 36 64 chr13 47443564 47443688 -72840624 - B1F SINE Alu -26 123 3 9 946 183 129 0 0 chr13 47444974 47445005 -72839307 + (TA)n Simple_repeat Simple_repeat 2 32 0 9 946 1102 187 19 62 chr13 47445005 47445262 -72839050 - Lx9 LINE L1 -168 7476 7231 9 946 423 0 0 0 chr13 47445613 47445660 -72838652 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 946 1164 66 15 0 chr13 47445703 47445900 -72838412 + (TCTA)n Simple_repeat Simple_repeat 1 199 0 9 946 1381 232 73 13 chr13 47446417 47446801 -72837511 + MTD LTR MaLR 13 419 0 9 947 1016 112 0 12 chr13 47448561 47448733 -72835579 + (TTTC)n Simple_repeat Simple_repeat 4 173 0 9 947 1150 62 0 7 chr13 47448853 47448998 -72835314 + B1_Mm SINE Alu 4 147 0 9 947 236 36 33 83 chr13 47448999 47449059 -72835253 + A-rich Low_complexity Low_complexity 4 60 0 9 947 207 0 0 0 chr13 47450515 47450538 -72833774 + (CA)n Simple_repeat Simple_repeat 2 24 0 9 947 300 53 0 0 chr13 47452452 47452490 -72831822 + (TG)n Simple_repeat Simple_repeat 2 39 0 9 947 892 35 0 0 chr13 47452879 47452995 -72831317 + B1_Mus2 SINE Alu 32 147 0 9 947 205 144 80 9 chr13 47453566 47453678 -72830634 + (TCTG)n Simple_repeat Simple_repeat 2 121 0 9 947 180 97 0 0 chr13 47453725 47453756 -72830556 + (TCTCTG)n Simple_repeat Simple_repeat 6 36 0 9 947 500 252 159 40 chr13 47453757 47454009 -72830303 - B4A SINE B4 -6 286 5 9 947 237 360 84 18 chr13 47455411 47455578 -72828734 + MIRb SINE MIR 52 229 -39 9 947 539 96 0 12 chr13 47455612 47455696 -72828616 + (TCC)n Simple_repeat Simple_repeat 2 84 0 9 947 529 206 78 16 chr13 47455814 47455942 -72828370 - B1_Mur3 SINE Alu -13 136 1 9 947 3225 46 20 0 chr13 47456337 47456729 -72827583 - MTB LTR MaLR 0 400 1 9 947 3912 33 0 0 chr13 47457045 47457497 -72826815 - L1Md_F3 LINE L1 0 6584 6133 9 947 569 74 35 69 chr13 47458284 47458400 -72825912 - Lx LINE L1 0 6654 6543 9 947 226 345 106 0 chr13 47458835 47458977 -72825335 - MER117 DNA MER1_type -29 168 12 9 947 1455 235 72 21 chr13 47460906 47460992 -72823320 - RLTR16 LTR ERVK -5 500 402 9 947 369 0 0 0 chr13 47460992 47461033 -72823279 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 947 1455 235 72 21 chr13 47461033 47461420 -72822892 - RLTR16 LTR ERVK -104 401 4 9 947 784 331 48 3 chr13 47461474 47461789 -72822523 - MLT1A0 LTR MaLR -18 347 19 9 947 393 22 0 0 chr13 47462373 47462419 -72821893 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 947 23 0 0 0 chr13 47463037 47463060 -72821252 + AT_rich Low_complexity Low_complexity 1 23 0 9 947 259 130 18 18 chr13 47463315 47463370 -72820942 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 947 246 290 58 0 chr13 47463377 47463446 -72820866 - ID4_ SINE ID -6 77 5 9 947 252 237 0 0 chr13 47464601 47464612 -72819700 + (TG)n Simple_repeat Simple_repeat 2 12 0 9 947 3012 63 15 39 chr13 47464612 47465022 -72819290 + MTB LTR MaLR 1 400 0 9 947 252 237 0 0 chr13 47465022 47465086 -72819226 + (TG)n Simple_repeat Simple_repeat 2 65 0 9 947 21 0 0 0 chr13 47465300 47465321 -72818991 + AT_rich Low_complexity Low_complexity 1 21 0 9 947 1424 271 103 37 chr13 47465337 47466131 -72818181 - Lx9 LINE L1 -2 7642 6770 9 947 576 298 5 42 chr13 47466175 47466364 -72817948 - B3A SINE B2 -16 182 1 9 947 313 250 141 0 chr13 47466370 47466462 -72817850 - ID_B1 SINE B4 -31 193 89 9 947 309 70 0 50 chr13 47466483 47466543 -72817769 + L1_Mus3 LINE L1 6577 6633 -5 9 947 2499 93 6 3 chr13 47466618 47466964 -72817348 - L1_Mus3 LINE L1 -103 6535 6189 9 947 242 256 86 62 chr13 47467530 47467692 -72816620 - L1MC4 LINE L1 -384 7658 7493 9 947 452 174 8 34 chr13 47467774 47467893 -72816419 + Lx9 LINE L1 7511 7626 -18 9 947 219 78 39 19 chr13 47467893 47467945 -72816367 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 947 745 102 36 25 chr13 47467969 47468249 -72816063 + (CA)n Simple_repeat Simple_repeat 1 282 0 9 947 333 308 60 0 chr13 47468284 47468401 -72815911 - MTE2a LTR MaLR -54 325 202 9 947 470 282 67 22 chr13 47468753 47468887 -72815425 - B1F SINE Alu -7 142 3 9 947 566 243 348 26 chr13 47469876 47469936 -72814376 - MLT2D LTR ERVL 0 414 345 9 947 378 42 0 0 chr13 47469936 47469984 -72814328 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 947 566 243 348 26 chr13 47469984 47470236 -72814076 - MLT2D LTR ERVL -70 344 2 9 947 572 246 41 0 chr13 47470512 47470634 -72813678 - B1F1 SINE Alu -6 143 17 9 947 605 332 73 11 chr13 47470943 47471301 -72813011 + L1M3 LINE L1 3776 4159 -1987 9 947 1415 299 96 27 chr13 47471317 47471410 -72812902 + L1M3 LINE L1 4318 4433 -1707 9 947 342 0 0 0 chr13 47471410 47471448 -72812864 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 947 1415 299 96 27 chr13 47471448 47472194 -72812118 + L1M3 LINE L1 4434 5214 -926 9 947 2014 253 79 34 chr13 47472409 47472494 -72811818 + L1MA7 LINE L1 5342 5426 -865 9 947 297 0 0 0 chr13 47472494 47472527 -72811785 + (CA)n Simple_repeat Simple_repeat 1 33 0 9 947 351 0 0 0 chr13 47472527 47472565 -72811747 + (TC)n Simple_repeat Simple_repeat 1 39 0 9 947 2014 253 79 34 chr13 47472565 47473284 -72811028 + L1MA7 LINE L1 5427 6183 -108 9 947 1783 156 123 3 chr13 47473688 47473816 -72810496 - ORR1D1 LTR MaLR 0 374 244 9 947 258 32 0 0 chr13 47473816 47473847 -72810465 + (CAGG)n Simple_repeat Simple_repeat 4 34 0 9 947 1783 156 123 3 chr13 47473847 47474052 -72810260 - ORR1D1 LTR MaLR -131 243 3 9 947 211 281 51 34 chr13 47474191 47474250 -72810062 + ID SINE ID 16 75 -149 9 947 279 0 0 0 chr13 47474272 47474303 -72810009 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 947 432 297 0 0 chr13 47474306 47474407 -72809905 + B4A SINE B4 189 289 -3 9 947 208 286 0 0 chr13 47474539 47474595 -72809717 + (CATG)n Simple_repeat Simple_repeat 3 58 0 9 947 315 0 0 0 chr13 47475379 47475414 -72808898 + (CA)n Simple_repeat Simple_repeat 1 35 0 9 947 405 70 0 0 chr13 47475480 47475537 -72808775 + (GA)n Simple_repeat Simple_repeat 2 58 0 9 947 269 296 27 18 chr13 47475561 47475671 -72808641 - ORR1E LTR MaLR -248 111 1 9 947 962 144 86 6 chr13 47477002 47477153 -72807159 + B2_Mm2 SINE B2 2 167 -28 9 947 366 23 0 0 chr13 47477153 47477196 -72807116 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 9 947 962 144 86 6 chr13 47477196 47477218 -72807094 + B2_Mm2 SINE B2 168 189 -6 9 947 221 321 36 0 chr13 47477780 47477864 -72806448 - MIR SINE MIR -19 243 157 9 947 268 233 105 0 chr13 47478935 47479021 -72805291 + RSINE1 SINE B4 10 104 -61 9 947 608 208 153 11 chr13 47479086 47479276 -72805036 + Tigger5 DNA MER2_type 2175 2391 -15 9 947 622 310 74 46 chr13 47479314 47479598 -72804714 - B4 SINE B4 0 292 1 9 947 216 0 0 0 chr13 47480102 47480126 -72804186 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 9 947 247 328 60 0 chr13 47480379 47480495 -72803817 + MTEa LTR MaLR 1 123 -256 9 947 556 288 65 72 chr13 47480548 47480840 -72803472 + MT2A LTR ERVL 244 533 0 9 947 21 0 0 0 chr13 47480947 47480968 -72803344 + AT_rich Low_complexity Low_complexity 1 21 0 9 947 312 311 119 6 chr13 47483970 47484138 -72800174 + Tigger5 DNA MER2_type 54 240 -2166 9 947 907 240 30 0 chr13 47485781 47485981 -72798331 - B3 SINE B2 -10 206 1 9 947 230 309 117 0 chr13 47486257 47486405 -72797907 + MIRb SINE MIR 4 166 -102 9 947 351 0 0 0 chr13 47486916 47486955 -72797357 + (TC)n Simple_repeat Simple_repeat 2 40 0 9 947 189 0 0 0 chr13 47486955 47486975 -72797337 + (TG)n Simple_repeat Simple_repeat 2 22 0 9 947 348 326 116 17 chr13 47487020 47487201 -72797111 + Tigger5 DNA MER2_type 40 238 -2168 9 947 1501 284 81 55 chr13 47487289 47487910 -72796402 - Lx8 LINE L1 -2 7471 6835 9 947 297 289 0 0 chr13 47487934 47488010 -72796302 + ID4_ SINE ID 2 77 -6 9 947 446 108 12 0 chr13 47488021 47488104 -72796208 + (CA)n Simple_repeat Simple_repeat 2 85 0 9 947 342 0 0 0 chr13 47488104 47488142 -72796170 + (GA)n Simple_repeat Simple_repeat 2 39 0 9 947 347 253 0 0 chr13 47488447 47488526 -72795786 - Lx8 LINE L1 -650 6823 6745 9 947 1086 100 0 0 chr13 47488613 47488793 -72795519 + (CA)n Simple_repeat Simple_repeat 1 180 0 9 947 403 319 3 14 chr13 47488916 47489057 -72795255 + B1F SINE Alu 9 148 -1 9 947 238 388 48 27 chr13 47489824 47490012 -72794300 + MLT1A LTR MaLR 183 374 0 9 947 551 281 0 0 chr13 47490206 47490341 -72793971 - B3A SINE B2 -55 143 9 9 947 417 135 0 0 chr13 47490647 47490736 -72793576 + (CAA)n Simple_repeat Simple_repeat 2 90 0 9 947 587 273 87 36 chr13 47491018 47491295 -72793017 + B4A SINE B4 1 291 -1 9 947 180 0 0 0 chr13 47491302 47491322 -72792990 + (CA)n Simple_repeat Simple_repeat 1 20 0 9 947 204 315 125 39 chr13 47491447 47491655 -72792657 + MIRb SINE MIR 40 265 -3 9 947 238 271 108 72 chr13 47492028 47492049 -72792263 - B2_Mm2 SINE B2 -9 186 14 1 947 620 301 20 0 chr13 47492049 47492195 -72792117 - RSINE1 SINE B4 -2 163 15 1 947 238 213 32 16 chr13 47492651 47492713 -72791599 - B4A SINE B4 -12 280 218 1 947 799 236 51 77 chr13 47492787 47493021 -72791291 - B4A SINE B4 -60 232 5 1 947 387 0 0 0 chr13 47495512 47495555 -72788757 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 947 210 364 34 28 chr13 47495767 47495945 -72788367 - MIRb SINE MIR -14 254 76 1 947 360 296 86 30 chr13 47496660 47496711 -72787601 + RLTR15 LTR ERVK 45 100 -259 1 947 417 20 0 0 chr13 47496711 47496761 -72787551 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 947 360 296 86 30 chr13 47496761 47496977 -72787335 + RLTR15 LTR ERVK 101 326 -33 1 947 1748 124 124 3 chr13 47497003 47497310 -72787002 - MTC LTR MaLR -33 388 45 1 947 297 0 0 0 chr13 47497355 47497388 -72786924 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 947 194 150 0 24 chr13 47498115 47498156 -72786156 + CT-rich Low_complexity Low_complexity 1 40 0 1 947 201 74 0 0 chr13 47498348 47498375 -72785937 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 947 204 125 0 0 chr13 47498658 47498690 -72785622 + (T)n Simple_repeat Simple_repeat 1 32 0 1 947 863 73 16 0 chr13 47499259 47499382 -72784930 + (TCCC)n Simple_repeat Simple_repeat 1 125 0 1 947 244 319 54 11 chr13 47499392 47499484 -72784828 - B1_Mur2 SINE Alu -6 143 48 1 947 273 221 0 0 chr13 47499486 47499554 -72784758 + CT-rich Low_complexity Low_complexity 1 68 0 1 947 474 158 0 12 chr13 47500309 47500392 -72783920 - ID2 SINE ID 0 83 2 1 947 1850 153 66 78 chr13 47500416 47500827 -72783485 + Lx4B LINE L1 6648 7053 -5 2 947 291 127 42 14 chr13 47501029 47501101 -72783211 + CT-rich Low_complexity Low_complexity 3 76 0 3 947 604 334 61 41 chr13 47502197 47502540 -72781772 - MLT1B LTR MaLR -19 371 22 4 947 272 111 19 0 chr13 47502725 47502779 -72781533 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 5 947 1501 58 11 0 chr13 47503024 47503215 -72781097 - B2_Mm1a SINE B2 0 193 1 6 947 3389 190 70 57 chr13 47503220 47504352 -72779960 - RMER1A Other Other 0 1066 1 7 947 546 257 110 105 chr13 47504352 47504543 -72779769 - RMER1A Other Other -790 240 49 8 947 1232 292 43 14 chr13 47504584 47504955 -72779357 - RMER1B Other Other -677 389 8 9 947 25 31 0 0 chr13 47507641 47507673 -72776639 + AT_rich Low_complexity Low_complexity 1 32 0 1 947 915 267 43 12 chr13 47507912 47508166 -72776146 + Lx9 LINE L1 6612 6873 -771 1 947 322 309 74 0 chr13 47510043 47510205 -72774107 + ORR1E LTR MaLR 4 177 -182 1 947 1351 71 44 6 chr13 47511531 47511714 -72772598 - B2_Mm2 SINE B2 -2 193 4 1 947 465 62 0 0 chr13 47511877 47511942 -72772370 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 947 608 293 40 15 chr13 47512270 47512471 -72771841 - B3 SINE B2 0 216 11 1 947 436 184 39 48 chr13 47513407 47513573 -72770739 - B3 SINE B2 -2 193 27 1 947 216 0 0 0 chr13 47513608 47513632 -72770680 + (T)n Simple_repeat Simple_repeat 1 24 0 1 947 8371 39 2 2 chr13 47513801 47515007 -72769305 - L1Md_F2 LINE L1 0 6582 5378 1 947 7551 62 7 1 chr13 47515004 47515964 -72768348 + L1Md_F2 LINE L1 4415 5380 -503 1 947 186 167 0 0 chr13 47516015 47516051 -72768261 + CT-rich Low_complexity Low_complexity 3 38 0 1 947 341 276 33 107 chr13 47517290 47517437 -72766875 - L1MEg LINE L1 -670 5667 5538 2 947 2730 66 91 3 chr13 47517437 47517801 -72766511 - MTA_Mm LTR MaLR 0 396 1 2 947 341 276 33 107 chr13 47517801 47517896 -72766416 - L1MEg LINE L1 -800 5537 5443 2 947 557 261 177 16 chr13 47518061 47518310 -72766002 + B4A SINE B4 2 290 -2 2 947 323 218 10 0 chr13 47518320 47518421 -72765891 + (CA)n Simple_repeat Simple_repeat 1 102 0 2 947 213 222 22 0 chr13 47518427 47518472 -72765840 - ID_B1 SINE B4 -88 136 91 2 947 368 281 103 23 chr13 47518498 47518673 -72765639 - L1MEg LINE L1 -1198 5121 4933 2 947 348 322 79 43 chr13 47518841 47519094 -72765218 - L1MEg LINE L1 -4515 1900 1639 2 947 303 249 152 38 chr13 47519399 47519583 -72764729 - L1MEg LINE L1 -5088 1312 1108 2 947 277 254 0 0 chr13 47520323 47520382 -72763930 - MER5A DNA MER1_type -30 159 101 2 947 316 284 27 44 chr13 47520410 47520524 -72763788 - Lx7 LINE L1 -2005 5691 5546 2 947 181 348 96 21 chr13 47521143 47521237 -72763075 - MIR SINE MIR -142 120 20 2 947 441 273 73 0 chr13 47521495 47521605 -72762707 + RSINE1 SINE B4 22 139 -26 2 947 641 97 0 26 chr13 47521610 47521727 -72762585 + (TC)n Simple_repeat Simple_repeat 2 115 0 2 947 486 0 0 0 chr13 47521727 47521781 -72762531 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 947 2536 192 53 135 chr13 47522222 47523105 -72761207 + RMER17B LTR ERVK 1 811 -147 3 947 541 258 42 61 chr13 47523284 47523449 -72760863 + RSINE1 SINE B4 3 164 -1 3 947 222 37 0 0 chr13 47523460 47523487 -72760825 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 947 537 80 0 0 chr13 47524045 47524120 -72760192 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 3 947 264 59 0 0 chr13 47524198 47524232 -72760080 + (TATG)n Simple_repeat Simple_repeat 3 36 0 3 947 572 281 26 0 chr13 47524237 47524390 -72759922 - B3A SINE B2 -41 157 1 3 947 607 281 11 6 chr13 47527114 47527293 -72757019 + ID_B1 SINE B4 26 205 -19 3 947 1053 269 122 23 chr13 47527794 47528186 -72756126 + Lx8 LINE L1 6956 7386 -87 3 947 189 0 0 0 chr13 47528254 47528275 -72756037 + (TG)n Simple_repeat Simple_repeat 1 21 0 3 947 504 0 0 0 chr13 47528275 47528330 -72755982 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 947 1341 134 4 78 chr13 47528353 47528596 -72755716 + URR1B DNA MER1_type 1 225 0 4 947 611 327 15 10 chr13 47528730 47528931 -72755381 - MT2A LTR ERVL -94 439 238 4 947 303 167 0 0 chr13 47528931 47528997 -72755315 + CT-rich Low_complexity Low_complexity 1 66 0 4 947 360 301 34 57 chr13 47529001 47529177 -72755135 - MT2A LTR ERVL -295 238 67 4 947 331 318 79 0 chr13 47529107 47529233 -72755079 - MTE2a LTR MaLR -242 137 2 4 947 1154 96 11 0 chr13 47529268 47529446 -72754866 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 4 947 300 316 10 10 chr13 47529456 47529555 -72754757 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 947 183 129 0 0 chr13 47531094 47531125 -72753187 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 947 370 311 56 6 chr13 47531741 47531903 -72752409 - MIR SINE MIR -66 196 27 4 947 432 37 0 0 chr13 47533754 47533808 -72750504 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 947 359 219 0 0 chr13 47533811 47533893 -72750419 + MER5A1 DNA MER1_type 83 164 -2 5 947 413 240 0 0 chr13 47534141 47534216 -72750096 + ID4_ SINE ID 2 76 -7 5 947 1261 140 28 9 chr13 47534396 47534612 -72749700 - URR1B DNA MER1_type 0 225 6 5 947 233 385 19 25 chr13 47535693 47535853 -72748459 + MER65D LTR ERV1 179 337 -136 5 947 814 274 114 1 chr13 47537058 47537424 -72746888 + MLT2B4 LTR ERVL 1 470 -97 5 947 237 132 0 0 chr13 47537424 47537462 -72746850 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 5 947 346 214 119 0 chr13 47537501 47537585 -72746727 + MLT2B3 LTR ERVL 10 103 -451 5 947 5588 165 60 19 chr13 47538386 47539410 -72744902 - Lx5 LINE L1 0 7050 5985 5 947 2539 128 56 20 chr13 47539410 47539855 -72744457 + L1_Mur2 LINE L1 4701 5161 -716 5 947 486 305 38 0 chr13 47539858 47539989 -72744323 - ID_B1 SINE B4 -11 213 78 5 947 324 326 22 29 chr13 47540012 47540148 -72744164 - L1MB5 LINE L1 -46 6128 5994 6 947 233 204 41 0 chr13 47540624 47540673 -72743639 + CT-rich Low_complexity Low_complexity 4 54 0 6 947 519 317 116 0 chr13 47540673 47540872 -72743440 - ID_B1 SINE B4 0 224 3 6 947 264 222 0 0 chr13 47541092 47541164 -72743148 + (TA)n Simple_repeat Simple_repeat 2 73 0 6 947 1171 75 0 0 chr13 47541246 47541392 -72742920 - B1_Mus1 SINE Alu -1 147 2 6 947 259 351 14 0 chr13 47542448 47542596 -72741716 + (TA)n Simple_repeat Simple_repeat 2 151 0 6 947 3138 295 92 23 chr13 47542821 47544079 -72740233 + Lx8 LINE L1 6010 7359 -114 6 947 384 22 0 0 chr13 47544079 47544124 -72740188 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 947 3138 295 92 23 chr13 47544124 47544235 -72740077 + Lx8 LINE L1 7360 7473 0 6 947 675 332 50 48 chr13 47544428 47544785 -72739527 - ORR1E LTR MaLR -1 358 1 6 947 2839 293 89 57 chr13 47544785 47544955 -72739357 - ORR1E-int LTR MaLR -53 1527 1362 6 947 216 67 0 0 chr13 47544955 47544985 -72739327 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 6 947 2839 293 89 57 chr13 47544985 47545199 -72739113 - ORR1E-int LTR MaLR -219 1361 1147 6 947 5625 57 20 7 chr13 47545199 47545904 -72738408 - L1_Mus1 LINE L1 0 6567 5854 7 947 2839 293 89 57 chr13 47545904 47546407 -72737905 - ORR1E-int LTR MaLR -434 1146 622 6 947 945 37 44 0 chr13 47546407 47546542 -72737770 + (CATA)n Simple_repeat Simple_repeat 1 141 0 7 947 2839 293 89 57 chr13 47546542 47546956 -72737356 - ORR1E-int LTR MaLR -959 621 184 6 947 504 318 48 46 chr13 47547111 47547468 -72736844 - MTEb LTR MaLR 0 379 1 7 947 240 125 0 48 chr13 47548288 47548330 -72735982 - B3 SINE B2 -176 40 1 7 947 414 57 43 0 chr13 47549285 47549355 -72734957 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 947 2332 291 125 22 chr13 47549406 47550374 -72733938 - Lx9 LINE L1 -206 7438 6371 7 947 532 294 69 30 chr13 47550430 47550633 -72733679 - Lx8 LINE L1 -129 7344 7134 7 947 545 300 18 30 chr13 47550741 47550906 -72733406 + RSINE1 SINE B4 3 165 0 7 947 741 168 40 34 chr13 47551037 47551185 -72733127 - B1_Mur1 SINE Alu 0 149 1 7 947 21 57 0 0 chr13 47551194 47551229 -72733083 + AT_rich Low_complexity Low_complexity 1 35 0 7 947 713 320 82 18 chr13 47551233 47551573 -72732739 + MLT2D LTR ERVL 1 362 -52 8 947 957 234 32 12 chr13 47551610 47551861 -72732451 + MER2 DNA MER2_type 87 342 -3 8 947 1237 220 168 12 chr13 47551919 47552264 -72732048 + MTD LTR MaLR 7 405 -14 8 947 1124 133 32 22 chr13 47552449 47552634 -72731678 + B2_Mm2 SINE B2 1 187 -8 8 947 270 0 0 0 chr13 47552858 47552888 -72731424 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 947 268 206 14 42 chr13 47553324 47553395 -72730917 - L1MC4a LINE L1 0 7882 7814 8 947 221 292 0 0 chr13 47553516 47553564 -72730748 + polypyrimidine Low_complexity Low_complexity 1 48 0 8 947 1191 62 6 0 chr13 47553722 47553883 -72730429 - ORR1A2 LTR MaLR -1 326 165 8 947 612 83 0 0 chr13 47553979 47554075 -72730237 + (TA)n Simple_repeat Simple_repeat 2 97 0 8 947 207 69 0 0 chr13 47554144 47554173 -72730139 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 947 225 294 58 10 chr13 47554180 47554283 -72730029 + L1_Rod LINE L1 5721 5828 -19 9 947 2106 167 26 64 chr13 47554576 47555101 -72729211 + RLTR31A_Mm LTR ERVK 1 561 0 9 947 324 0 0 0 chr13 47555343 47555379 -72728933 + (TTA)n Simple_repeat Simple_repeat 1 36 0 9 947 866 325 52 26 chr13 47556135 47556520 -72727792 - LTR40a LTR ERVL -102 417 23 9 947 427 364 58 26 chr13 47556930 47557243 -72727069 + MLT1E3 LTR MaLR 293 615 -9 9 947 543 322 70 30 chr13 47557750 47558048 -72726264 + MLT1I LTR MaLR 61 370 -41 9 947 204 162 76 0 chr13 47558332 47558397 -72725915 + MIR SINE MIR 110 189 -87 9 947 238 307 198 40 chr13 47558425 47558673 -72725639 + B4A SINE B4 1 287 -5 9 947 26 0 0 0 chr13 47559201 47559227 -72725085 + AT_rich Low_complexity Low_complexity 1 26 0 9 947 213 39 0 0 chr13 47560105 47560131 -72724181 + (TTG)n Simple_repeat Simple_repeat 2 27 0 9 947 687 299 146 8 chr13 47560325 47560578 -72723734 + B4A SINE B4 1 288 -4 1 947 261 0 0 0 chr13 47561737 47561766 -72722546 + (T)n Simple_repeat Simple_repeat 1 29 0 1 947 1075 51 65 0 chr13 47561766 47561904 -72722408 - B1_Mus2 SINE Alu 0 147 1 1 947 306 0 0 0 chr13 47561948 47561982 -72722330 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 947 218 182 0 0 chr13 47561983 47562027 -72722285 + CT-rich Low_complexity Low_complexity 1 44 0 1 947 261 0 0 0 chr13 47562083 47562112 -72722200 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 947 380 165 16 49 chr13 47562112 47562297 -72722015 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 947 405 162 8 15 chr13 47562354 47562466 -72721846 + CT-rich Low_complexity Low_complexity 20 131 0 1 947 330 98 0 0 chr13 47562466 47562517 -72721795 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 947 405 162 8 15 chr13 47562517 47562536 -72721776 + polypyrimidine Low_complexity Low_complexity 1 19 0 1 947 749 328 64 37 chr13 47562662 47563036 -72721276 - Lx8 LINE L1 -146 7327 6944 1 947 641 155 0 8 chr13 47563115 47563245 -72721067 + GA-rich Low_complexity Low_complexity 4 132 0 1 947 603 230 21 7 chr13 47563250 47563390 -72720922 + B1F SINE Alu 2 143 -6 1 947 627 266 44 175 chr13 47563951 47564550 -72719762 + RMER20B LTR ERVK 18 596 -31 1 947 273 324 86 29 chr13 47564543 47564648 -72719664 + RMER20B LTR ERVK 504 614 -13 1 947 180 340 50 10 chr13 47565377 47565478 -72718834 - MIR3 SINE MIR -13 195 91 1 947 405 0 0 0 chr13 47565760 47565805 -72718507 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 947 329 286 15 53 chr13 47566072 47566116 -72718196 + MER5A DNA MER1_type 2 45 -144 1 947 363 141 0 0 chr13 47566116 47566194 -72718118 + (CAT)n Simple_repeat Simple_repeat 1 78 0 1 947 329 286 15 53 chr13 47566194 47566282 -72718030 + MER5A DNA MER1_type 46 129 -60 1 947 698 267 154 8 chr13 47566456 47566709 -72717603 + B4A SINE B4 3 292 0 1 947 1157 49 21 7 chr13 47566787 47566932 -72717380 + B1_Mus2 SINE Alu 1 147 0 1 947 183 42 0 0 chr13 47567685 47567709 -72716603 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 947 226 327 66 19 chr13 47568698 47568804 -72715508 + MIRb SINE MIR 30 140 -128 1 947 204 143 24 0 chr13 47568914 47568956 -72715356 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 947 721 228 52 38 chr13 47569319 47569529 -72714783 + B3A SINE B2 1 213 -3 1 947 333 213 82 18 chr13 47569656 47569728 -72714584 + HAL1-3A_ME LINE L1 1896 1976 -882 1 947 480 99 0 0 chr13 47569728 47569799 -72714513 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 947 333 213 82 18 chr13 47569799 47569836 -72714476 + HAL1-3A_ME LINE L1 1977 2012 -846 1 947 452 288 27 0 chr13 47569862 47569973 -72714339 + RSINE1 SINE B4 9 122 -43 1 947 441 0 0 0 chr13 47569989 47570038 -72714274 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 947 315 0 0 0 chr13 47570038 47570072 -72714240 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 947 891 311 86 59 chr13 47570102 47570778 -72713534 - L1MB2 LINE L1 -34 6149 5458 1 947 2520 125 5 16 chr13 47571052 47571492 -72712820 - RLTR28 LTR ERVL -2 522 88 1 947 288 274 49 99 chr13 47571785 47571839 -72712473 - Lx8 LINE L1 -419 7054 7000 1 947 4343 102 0 24 chr13 47571839 47572470 -72711842 - Lx LINE L1 0 6654 6039 1 947 288 274 49 99 chr13 47572470 47572577 -72711735 - Lx8 LINE L1 -474 6999 6901 1 947 456 19 0 0 chr13 47572617 47572670 -72711642 + (CCA)n Simple_repeat Simple_repeat 3 55 0 1 947 204 40 0 0 chr13 47572670 47572695 -72711617 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 947 754 331 37 26 chr13 47573280 47573708 -72710604 - Lx8 LINE L1 -72 7401 6969 1 947 754 331 37 26 chr13 47574318 47574746 -72709566 - Lx8 LINE L1 -72 7401 6969 1 947 248 370 42 74 chr13 47574924 47575371 -72708941 - L2a LINE L2 -1 3425 2993 1 947 458 233 6 0 chr13 47575416 47575575 -72708737 + (GGGTG)n Simple_repeat Simple_repeat 4 163 0 1 947 254 309 12 0 chr13 47577120 47577201 -72707111 + MER63D DNA AcHobo 8 89 -972 1 947 191 337 19 29 chr13 47577882 47577986 -72706326 + L2 LINE L2 2473 2575 -844 1 947 906 189 0 0 chr13 47578319 47578499 -72705813 + CT-rich Low_complexity Low_complexity 1 180 0 1 947 280 250 14 27 chr13 47578721 47578795 -72705517 + PB1D7 SINE Alu 1 73 -47 1 948 1033 250 103 30 chr13 47579245 47579575 -72704737 - ORR1E LTR MaLR -2 357 4 1 948 516 270 19 19 chr13 47579967 47580122 -72704190 + RMER15 LTR ERVL 357 511 -64 1 948 536 276 70 123 chr13 47580807 47581108 -72703204 - MLT1B LTR MaLR -61 329 45 1 948 21 0 0 0 chr13 47581291 47581312 -72703000 + AT_rich Low_complexity Low_complexity 1 21 0 1 948 1214 211 33 151 chr13 47581542 47581966 -72702346 + ORR1D1 LTR MaLR 1 374 0 1 948 1064 126 0 6 chr13 47582401 47582576 -72701736 + (TTCC)n Simple_repeat Simple_repeat 1 174 0 1 948 235 360 60 20 chr13 47582775 47582925 -72701387 + ORR1E LTR MaLR 74 229 -130 1 948 310 270 0 0 chr13 47583338 47583412 -72700900 - B4A SINE B4 -214 78 5 1 948 709 264 177 34 chr13 47584000 47584266 -72700046 + ORR1E LTR MaLR 4 307 -52 1 948 772 204 28 0 chr13 47584290 47584432 -72699880 - B1_Mus2 SINE Alu 0 147 2 1 948 408 138 38 0 chr13 47584432 47584500 -72699812 + ORR1E LTR MaLR 308 378 -1 1 948 813 110 0 0 chr13 47584698 47584834 -72699478 + (TC)n Simple_repeat Simple_repeat 1 136 0 1 948 232 250 0 93 chr13 47585206 47585281 -72699031 - L1ME4a LINE L1 -99 6025 5958 1 948 801 302 14 40 chr13 47585936 47586233 -72698079 + B4A SINE B4 2 290 -2 1 948 21011 58 5 1 chr13 47586334 47589681 -72694631 - L1Md_F2 LINE L1 0 6582 3223 1 948 4759 115 7 2 chr13 47589683 47591099 -72693213 - L1Md_F2 LINE L1 -4056 1827 447 1 948 216 0 0 0 chr13 47591542 47591566 -72692746 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 948 592 214 0 57 chr13 47592270 47592394 -72691918 + PB1D9 SINE Alu 3 119 -1 1 948 2417 96 65 33 chr13 47593426 47593824 -72690488 + IAPLTR2a LTR ERVK 1 411 0 1 948 1890 87 23 8 chr13 47593933 47594199 -72690113 + Lx3_Mus LINE L1 6732 7001 -8 1 948 573 278 28 34 chr13 47594428 47594607 -72689705 - RMER1C Other Other -511 831 654 1 948 210 143 0 0 chr13 47594737 47594772 -72689540 + (A)n Simple_repeat Simple_repeat 1 35 0 1 948 3197 49 15 5 chr13 47595011 47595403 -72688909 - MTA_Mm LTR MaLR 0 396 1 1 948 344 264 103 0 chr13 47595468 47595555 -72688757 + RMER1C Other Other 411 506 -836 1 948 812 129 21 0 chr13 47595569 47595709 -72688603 + (TTTTC)n Simple_repeat Simple_repeat 2 144 0 1 948 273 324 87 17 chr13 47596780 47596953 -72687359 - L1MD LINE L1 -2323 3823 3639 1 948 237 238 23 81 chr13 47597586 47597673 -72686639 + LTR16C LTR ERVL 392 473 -16 1 948 1771 215 16 5 chr13 47598361 47598731 -72685581 + ORR1D1 LTR MaLR 1 374 0 1 948 292 366 0 10 chr13 47598775 47598877 -72685435 + L2b LINE L2 3272 3372 -3 1 948 737 249 9 40 chr13 47599501 47599746 -72684566 - MTEa LTR MaLR -5 374 114 1 948 329 257 87 93 chr13 47600162 47600312 -72684000 - B1F SINE Alu 0 149 1 1 948 4411 49 0 6 chr13 47602787 47603324 -72680988 + L1Md_F2 LINE L1 6011 6544 -38 1 948 294 29 0 0 chr13 47603324 47603359 -72680953 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 948 1064 273 105 6 chr13 47603588 47603912 -72680400 + ORR1E LTR MaLR 4 359 0 1 948 243 0 0 0 chr13 47604342 47604369 -72679943 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 948 501 17 0 0 chr13 47604369 47604426 -72679886 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 948 286 352 0 9 chr13 47604566 47604675 -72679637 - PB1D10 SINE Alu -9 108 1 1 948 322 333 29 81 chr13 47605228 47605437 -72678875 - Charlie16a DNA MER1_type 0 342 145 1 948 441 0 0 0 chr13 47605627 47605676 -72678636 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 948 666 105 0 0 chr13 47605676 47605789 -72678523 + (TG)n Simple_repeat Simple_repeat 1 114 0 1 948 516 146 0 0 chr13 47605789 47605878 -72678434 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 948 270 250 0 0 chr13 47606429 47606493 -72677819 + GA-rich Low_complexity Low_complexity 1 64 0 1 948 262 242 7 53 chr13 47606507 47606590 -72677722 + ID4_ SINE ID 4 87 -65 1 948 217 191 0 41 chr13 47607021 47607070 -72677242 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 1 948 273 334 63 33 chr13 47607113 47607375 -72676937 - B4A SINE B4 -16 276 4 1 948 181 360 38 25 chr13 47607381 47607538 -72676774 + MIR SINE MIR 22 180 -82 1 948 385 324 114 25 chr13 47607819 47608180 -72676132 + L1MC4a LINE L1 6946 7338 -544 1 948 317 306 22 15 chr13 47608296 47608432 -72675880 + CT-rich Low_complexity Low_complexity 2 138 0 1 948 2026 162 138 63 chr13 47608610 47609024 -72675288 + RLTR20B2 LTR ERVK 1 465 -95 1 948 423 0 0 0 chr13 47609024 47609071 -72675241 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 948 2026 162 138 63 chr13 47609071 47609177 -72675135 + RLTR20B2 LTR ERVK 466 559 -1 1 948 405 308 49 106 chr13 47609480 47609952 -72674360 + L1MC5 LINE L1 6729 7173 -788 1 948 269 287 32 0 chr13 47610487 47610581 -72673731 + L1MC5 LINE L1 7756 7852 -109 1 948 314 184 13 0 chr13 47611332 47611408 -72672904 + CT-rich Low_complexity Low_complexity 1 77 0 1 948 612 145 11 44 chr13 47611426 47611495 -72672817 + polypyrimidine Low_complexity Low_complexity 110 176 0 1 948 2879 3 32 0 chr13 47611495 47611803 -72672509 - RLTRETN_Mm LTR ERVK 0 322 5 1 948 612 145 11 44 chr13 47611803 47611913 -72672399 + polypyrimidine Low_complexity Low_complexity 3 109 0 1 948 376 288 165 16 chr13 47611933 47612181 -72672131 - L1MC2 LINE L1 -181 6152 5868 1 948 703 259 66 87 chr13 47612248 47612535 -72671777 - L1MCc LINE L1 -2385 4556 4276 1 948 8154 39 12 8 chr13 47612600 47613881 -72670431 - L1Md_F3 LINE L1 0 6584 5303 1 948 1536 50 39 0 chr13 47613881 47614061 -72670251 - B2_Mm2 SINE B2 -8 187 1 2 948 6164 49 1 14 chr13 47614061 47614240 -72670072 - L1Md_F3 LINE L1 -581 5302 5124 1 948 22 70 0 0 chr13 47614333 47614376 -72669936 + AT_rich Low_complexity Low_complexity 1 43 0 2 948 329 239 142 58 chr13 47614396 47614622 -72669690 - L1MCc LINE L1 -2846 4095 3851 1 948 976 231 116 9 chr13 47614693 47615020 -72669292 - L1MCc LINE L1 -3446 3495 3134 1 948 293 282 18 18 chr13 47615369 47615481 -72668831 - L1MCc LINE L1 -6261 162 51 1 948 42217 19 2 7 chr13 47615911 47623826 -72660486 - L1Md_A LINE L1 0 6997 1 2 948 284 279 76 28 chr13 47624109 47624253 -72660059 + L1M3 LINE L1 3752 3902 -2238 2 948 297 0 0 0 chr13 47624293 47624326 -72659986 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 948 504 48 0 0 chr13 47624491 47624554 -72659758 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 948 1576 286 114 14 chr13 47624772 47625429 -72658883 + L1M2 LINE L1 3480 4204 -1939 2 948 396 0 0 0 chr13 47625429 47625473 -72658839 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 2 948 1576 286 114 14 chr13 47625473 47625598 -72658714 + L1M2 LINE L1 4205 4339 -1804 2 948 292 103 35 0 chr13 47626374 47626432 -72657880 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 948 679 291 0 87 chr13 47626432 47626628 -72657684 - B3A SINE B2 -19 179 1 2 948 1262 57 6 0 chr13 47627094 47627251 -72657061 - L1Md_T LINE L1 -2 6580 6423 2 948 1307 195 79 21 chr13 47627252 47627388 -72656924 - Lx9 LINE L1 -2 7642 7504 2 948 233 57 29 0 chr13 47627388 47627423 -72656889 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 948 1307 195 79 21 chr13 47627423 47627616 -72656696 - Lx9 LINE L1 -141 7503 7294 2 948 679 308 74 5 chr13 47627664 47627866 -72656446 + ID_B1 SINE B4 2 217 -7 2 948 1699 234 22 106 chr13 47628223 47628772 -72655540 - RMER19C LTR ERVK 0 611 109 2 948 508 266 297 8 chr13 47629110 47629488 -72654824 - RMER5 LTR ERV1 0 534 48 2 948 561 295 27 21 chr13 47631082 47631269 -72653043 + Lx8 LINE L1 7193 7380 -93 2 948 308 307 13 0 chr13 47631382 47631457 -72652855 - ID4_ SINE ID -6 77 2 2 948 4626 16 8 0 chr13 47631845 47632340 -72651972 + L1Md_F3 LINE L1 6085 6583 -1 2 948 527 198 192 30 chr13 47632618 47632785 -72651527 + B3A SINE B2 1 194 -4 2 948 2321 160 53 5 chr13 47633365 47633761 -72650551 + MTC LTR MaLR 1 415 -6 2 948 3032 136 172 7 chr13 47633762 47634354 -72649958 + MTC-int LTR MaLR 4 693 -565 2 948 455 214 135 0 chr13 47634454 47634580 -72649732 + ORR1E LTR MaLR 6 148 -211 2 948 696 56 0 0 chr13 47634584 47634673 -72649639 + (TC)n Simple_repeat Simple_repeat 2 90 0 2 948 301 273 95 28 chr13 47634673 47634819 -72649493 + ORR1E LTR MaLR 210 368 -11 2 948 391 343 28 69 chr13 47634917 47635164 -72649148 + ORR1E LTR MaLR 1 237 -122 2 948 428 238 114 8 chr13 47635300 47635431 -72648881 - MER2 DNA MER2_type -69 276 132 2 948 285 29 0 0 chr13 47635440 47635474 -72648838 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 948 360 0 0 0 chr13 47635474 47635513 -72648799 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 948 414 0 0 0 chr13 47636027 47636073 -72648239 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 948 650 281 5 56 chr13 47637089 47637304 -72647008 + B3 SINE B2 1 204 -12 2 948 262 138 0 58 chr13 47637714 47637783 -72646529 + GA-rich Low_complexity Low_complexity 2 66 0 2 948 200 59 29 0 chr13 47637886 47637920 -72646392 + (TTTTTG)n Simple_repeat Simple_repeat 6 40 0 2 948 24 0 0 0 chr13 47638050 47638074 -72646238 + AT_rich Low_complexity Low_complexity 1 24 0 2 948 1609 322 171 33 chr13 47638393 47639101 -72645211 + ORR1E-int LTR MaLR 93 864 -716 2 948 2189 132 13 171 chr13 47639101 47639569 -72644743 - ORR1B1 LTR MaLR 0 394 1 2 948 1609 322 171 33 chr13 47639569 47639903 -72644409 + ORR1E-int LTR MaLR 865 1278 -302 2 948 361 292 8 32 chr13 47639913 47640037 -72644275 + ORR1E-int LTR MaLR 1430 1550 -30 2 948 469 309 20 30 chr13 47640019 47640208 -72644104 + ORR1E LTR MaLR 6 189 -181 2 948 331 257 153 40 chr13 47640390 47640540 -72643772 - Lx8 LINE L1 -3 7470 7304 2 948 1545 260 115 20 chr13 47640546 47641052 -72643260 - Lx8 LINE L1 -331 7142 6589 2 948 813 172 20 33 chr13 47641287 47641437 -72642875 + B1_Mur2 SINE Alu 1 148 -1 2 948 577 85 0 19 chr13 47641440 47641548 -72642764 + (CAACC)n Simple_repeat Simple_repeat 2 107 0 2 948 342 147 0 0 chr13 47641568 47641636 -72642676 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 2 948 330 372 88 6 chr13 47642655 47642836 -72641476 + B4A SINE B4 8 203 -89 2 948 635 67 11 0 chr13 47642849 47642938 -72641374 + (GA)n Simple_repeat Simple_repeat 1 90 0 2 948 243 189 0 53 chr13 47642959 47643054 -72641258 + (CATA)n Simple_repeat Simple_repeat 2 91 0 2 948 711 157 0 0 chr13 47643167 47643302 -72641010 + CT-rich Low_complexity Low_complexity 20 154 0 2 948 1140 124 0 0 chr13 47643302 47643480 -72640832 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 2 948 711 157 0 0 chr13 47643480 47643497 -72640815 + polypyrimidine Low_complexity Low_complexity 3 19 0 2 948 667 131 26 0 chr13 47644029 47644182 -72640130 + CT-rich Low_complexity Low_complexity 1 156 0 2 948 886 244 0 0 chr13 47644203 47644379 -72639933 - B3 SINE B2 -40 176 1 2 948 340 266 25 0 chr13 47644856 47644935 -72639377 - ID4_ SINE ID 0 83 3 2 948 216 396 11 0 chr13 47645248 47645339 -72638973 - L2b LINE L2 -27 3348 3257 2 948 647 243 14 28 chr13 47645445 47645589 -72638723 + B1_Mur1 SINE Alu 2 143 -6 2 948 4341 160 61 81 chr13 47645593 47646512 -72637800 + RMER19B LTR ERVK 1 901 -1 2 948 192 77 0 0 chr13 47646521 47646547 -72637765 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 948 240 35 0 0 chr13 47646899 47646928 -72637384 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 948 307 323 72 36 chr13 47648197 47648312 -72636000 + MIR SINE MIR 49 179 -89 2 948 351 291 103 110 chr13 47648312 47648702 -72635610 + MLT1B LTR MaLR 1 387 -3 2 948 290 323 72 36 chr13 47648702 47648724 -72635588 + MIRb SINE MIR 180 198 -70 2 948 912 255 120 30 chr13 47648822 47649089 -72635223 - B4 SINE B4 -1 291 1 2 948 248 347 79 13 chr13 47649688 47649840 -72634472 - MIR3 SINE MIR -31 177 16 2 948 474 18 0 0 chr13 47649902 47649957 -72634355 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 948 447 336 114 54 chr13 47651601 47652047 -72632265 - LTR86A2 LTR ERVL -30 478 6 2 948 406 323 84 81 chr13 47654509 47654832 -72629480 - LTR78 LTR ERV1 0 1304 981 2 948 315 0 0 0 chr13 47655693 47655728 -72628584 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 948 577 261 0 0 chr13 47655738 47655857 -72628455 + ID_B1 SINE B4 94 212 -12 2 948 285 326 42 63 chr13 47656693 47656788 -72627524 - MER20 DNA MER1_type -113 106 14 2 948 604 161 29 22 chr13 47657388 47657807 -72626505 + (TG)n Simple_repeat Simple_repeat 1 422 0 2 948 312 250 0 0 chr13 47657847 47657903 -72626409 - ID4_ SINE ID -6 77 22 2 948 311 262 114 19 chr13 47658828 47658933 -72625379 - HAL1-3A_ME LINE L1 -769 2089 1975 2 948 425 99 28 0 chr13 47658933 47659004 -72625308 + (TATG)n Simple_repeat Simple_repeat 2 74 0 2 948 996 246 65 39 chr13 47659005 47659284 -72625028 - B4 SINE B4 0 292 7 2 948 273 97 0 40 chr13 47659303 47659361 -72624951 - L1MA6 LINE L1 -1 6299 6241 2 948 314 303 22 75 chr13 47659391 47659565 -72624747 - L1MC LINE L1 -705 5474 5309 2 948 449 214 42 51 chr13 47659565 47659683 -72624629 - PB1D10 SINE Alu 0 117 1 2 948 535 327 65 34 chr13 47659683 47660307 -72624005 - L1MC LINE L1 -871 5308 4674 2 948 314 275 115 82 chr13 47660636 47660818 -72623494 + L1M5 LINE L1 5009 5196 -950 2 948 269 265 0 0 chr13 47660820 47660888 -72623424 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 948 318 286 126 142 chr13 47660888 47661149 -72623163 - B4 SINE B4 0 292 36 2 948 551 280 25 37 chr13 47661526 47661689 -72622623 + RSINE1 SINE B4 5 165 0 2 948 21 36 0 0 chr13 47662136 47662164 -72622148 + AT_rich Low_complexity Low_complexity 1 28 0 2 948 302 313 0 0 chr13 47662806 47662873 -72621439 + RSINE1 SINE B4 23 89 -76 2 948 251 348 106 49 chr13 47662872 47663014 -72621298 - RSINE1 SINE B4 -15 150 1 2 948 225 0 0 0 chr13 47663036 47663061 -72621251 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 948 583 306 89 76 chr13 47663070 47663711 -72620601 - L1MC3 LINE L1 -379 7406 6758 2 948 502 286 177 39 chr13 47663726 47663828 -72620484 - L1MC3 LINE L1 -1103 6682 6555 2 948 1503 186 136 35 chr13 47663828 47663957 -72620355 - ORR1D1 LTR MaLR 0 374 230 2 948 225 0 0 0 chr13 47663957 47663982 -72620330 + (CAGG)n Simple_repeat Simple_repeat 2 26 0 2 948 1503 186 136 35 chr13 47663982 47664191 -72620121 - ORR1D1 LTR MaLR -145 229 3 2 948 502 286 177 39 chr13 47664191 47664473 -72619839 - L1MC3 LINE L1 -1231 6554 6245 2 948 699 279 21 16 chr13 47664752 47664941 -72619371 - ID_B1 SINE B4 -33 191 2 2 948 799 237 103 50 chr13 47665143 47665445 -72618867 + L1MC1 LINE L1 5997 6314 -19 2 948 590 126 54 6 chr13 47665991 47666159 -72618153 + (CATATA)n Simple_repeat Simple_repeat 3 178 0 2 948 1360 245 62 22 chr13 47666581 47666936 -72617376 - MTEb LTR MaLR -7 372 4 2 948 549 0 0 0 chr13 47667108 47667169 -72617143 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 948 263 339 94 43 chr13 47667273 47667390 -72616922 - MER20 DNA MER1_type -7 212 90 2 948 739 319 73 3 chr13 47667434 47667774 -72616538 - L1MB3 LINE L1 -275 5908 5545 2 948 236 154 19 0 chr13 47667977 47668029 -72616283 - L1M4 LINE L1 -1111 5035 4983 2 948 198 0 0 0 chr13 47668084 47668106 -72616206 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 948 363 215 25 0 chr13 47668116 47668195 -72616117 - ID_B1 SINE B4 -20 204 124 2 948 707 129 191 16 chr13 47668646 47668772 -72615540 + B1_Mur4 SINE Alu 2 149 -1 2 948 410 316 43 7 chr13 47669207 47669347 -72614965 - B3A SINE B2 -30 168 24 2 948 348 297 141 39 chr13 47669392 47669725 -72614587 - L1MC LINE L1 -2060 4086 3720 2 948 321 112 56 0 chr13 47670088 47670177 -72614135 + A-rich Low_complexity Low_complexity 2 95 0 2 948 207 100 0 0 chr13 47670601 47670631 -72613681 + (TCCCC)n Simple_repeat Simple_repeat 3 32 0 2 948 400 307 65 38 chr13 47671400 47671586 -72612726 + MER54B LTR ERVL 603 793 0 2 948 279 133 0 0 chr13 47671936 47671981 -72612331 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 948 707 247 19 0 chr13 47671994 47672156 -72612156 + B3 SINE B2 48 212 -4 2 948 1017 236 83 12 chr13 47672370 47672623 -72611689 - 7SK RNA RNA -52 279 9 2 948 382 247 0 21 chr13 47673109 47673204 -72611108 + PB1D7 SINE Alu 19 111 -9 3 948 432 0 0 0 chr13 47673660 47673708 -72610604 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 948 183 42 0 0 chr13 47674543 47674567 -72609745 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 948 1421 133 13 9 chr13 47674571 47674798 -72609514 - L1_Mus1 LINE L1 -1 6566 6339 3 948 252 0 0 0 chr13 47677086 47677114 -72607198 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 948 414 108 0 0 chr13 47677114 47677179 -72607133 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 948 637 313 42 5 chr13 47677184 47677396 -72606916 + B4A SINE B4 56 275 -17 3 948 360 0 0 0 chr13 47677444 47677484 -72606828 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 948 327 78 0 0 chr13 47678639 47678690 -72605622 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 3 948 536 305 143 36 chr13 47678766 47679018 -72605294 - B4A SINE B4 -12 280 2 3 948 249 331 113 0 chr13 47679029 47679162 -72605150 - B1F2 SINE Alu -1 148 1 3 948 350 182 14 50 chr13 47679719 47679858 -72604454 + (TATG)n Simple_repeat Simple_repeat 4 137 0 3 948 279 0 0 0 chr13 47679890 47679921 -72604391 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 948 479 116 41 16 chr13 47680617 47680703 -72603609 + GA-rich Low_complexity Low_complexity 1 89 0 3 948 1022 50 5 48 chr13 47680703 47680891 -72603421 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 948 479 116 41 16 chr13 47680891 47680927 -72603385 + polypurine Low_complexity Low_complexity 90 126 0 3 948 23 33 0 0 chr13 47681677 47681707 -72602605 + AT_rich Low_complexity Low_complexity 1 30 0 3 948 495 126 0 0 chr13 47682142 47682237 -72602075 + (TCCA)n Simple_repeat Simple_repeat 4 98 0 3 948 783 189 21 0 chr13 47682409 47682552 -72601760 + B1_Mur4 SINE Alu 5 150 0 3 948 2084 186 14 80 chr13 47683676 47683809 -72600503 + L1_Rod LINE L1 1176 1307 -6301 3 948 227 31 31 0 chr13 47683809 47683841 -72600471 + (CAA)n Simple_repeat Simple_repeat 2 34 0 3 948 2084 184 16 74 chr13 47683841 47684293 -72600019 + L1_Rod LINE L1 1308 1729 -4118 3 948 283 339 25 0 chr13 47684585 47684703 -72599609 - MLT1A1 LTR MaLR -2 406 286 3 948 294 273 50 10 chr13 47684782 47684882 -72599430 - MTEb LTR MaLR -225 154 51 3 948 773 54 8 11 chr13 47687127 47687254 -72597058 - L1_Mus1 LINE L1 -1 6581 6457 3 948 345 62 0 0 chr13 47687509 47687557 -72596755 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 948 857 217 6 0 chr13 47687592 47687758 -72596554 - Lx6 LINE L1 -4 7456 7290 3 948 3658 184 112 14 chr13 47687771 47689181 -72595131 - L1_Mur3 LINE L1 -3957 1923 357 3 948 816 11 0 0 chr13 47689207 47689300 -72595012 + (GA)n Simple_repeat Simple_repeat 2 94 0 3 948 1110 223 21 4 chr13 47689419 47689653 -72594659 + Lx9 LINE L1 7137 7374 -270 3 948 1305 79 51 0 chr13 47690181 47690359 -72593953 - B2_Mm2 SINE B2 -7 188 2 3 948 494 150 8 0 chr13 47692662 47692782 -72591530 + (CA)n Simple_repeat Simple_repeat 2 122 0 3 948 974 107 50 0 chr13 47692876 47693016 -72591296 - B1_Mus1 SINE Alu 0 148 2 3 948 492 260 87 20 chr13 47694319 47694468 -72589844 - MER77 LTR ERVL -20 587 429 3 948 845 157 36 0 chr13 47694587 47694727 -72589585 - B1_Mur4 SINE Alu -1 149 5 3 948 305 292 0 0 chr13 47694729 47694801 -72589511 - ID4 SINE ID -9 74 3 3 948 21 36 0 0 chr13 47695220 47695248 -72589064 + AT_rich Low_complexity Low_complexity 1 28 0 3 948 431 318 189 64 chr13 47696012 47696280 -72588032 + Charlie1a DNA MER1_type 40 331 -1124 3 948 542 298 86 27 chr13 47696280 47696466 -72587846 - B3A SINE B2 0 198 2 3 948 431 318 189 64 chr13 47696466 47696885 -72587427 + Charlie1a DNA MER1_type 332 813 -642 3 948 507 261 30 7 chr13 47696939 47697074 -72587238 + ID_B1 SINE B4 87 224 0 3 948 21 36 0 0 chr13 47697083 47697111 -72587201 + AT_rich Low_complexity Low_complexity 1 28 0 3 948 248 282 206 8 chr13 47697276 47697523 -72586789 + Charlie1a DNA MER1_type 1136 1431 -24 3 948 396 0 0 0 chr13 47697621 47697665 -72586647 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 948 233 267 0 13 chr13 47697668 47697744 -72586568 + GA-rich Low_complexity Low_complexity 2 76 0 3 948 302 172 7 43 chr13 47697746 47697886 -72586426 + (CAGA)n Simple_repeat Simple_repeat 2 136 0 3 948 488 130 11 0 chr13 47697942 47698034 -72586278 + (TTCC)n Simple_repeat Simple_repeat 3 95 0 3 948 290 307 349 9 chr13 47699273 47699491 -72584821 + B4A SINE B4 1 292 0 3 948 279 0 0 0 chr13 47699494 47699525 -72584787 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 948 423 0 0 0 chr13 47699525 47699571 -72584741 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 948 295 261 31 70 chr13 47699607 47699735 -72584577 - ID_B1 SINE B4 -2 222 100 3 948 27 0 0 0 chr13 47699822 47699849 -72584463 + AT_rich Low_complexity Low_complexity 1 27 0 3 948 4277 169 39 69 chr13 47701726 47702656 -72581656 + RMER19B LTR ERVK 1 902 0 3 948 272 244 85 0 chr13 47703311 47703393 -72580919 - MLT1B LTR MaLR -36 338 250 3 948 326 162 50 20 chr13 47703439 47703540 -72580772 + GA-rich Low_complexity Low_complexity 6 109 0 3 948 320 282 105 15 chr13 47703575 47703708 -72580604 - MLT1B LTR MaLR -230 160 16 3 948 260 91 23 0 chr13 47704772 47704816 -72579496 + (TTCCC)n Simple_repeat Simple_repeat 3 47 0 3 948 234 0 0 0 chr13 47704827 47704853 -72579459 + (TTTC)n Simple_repeat Simple_repeat 1 26 0 3 948 772 189 23 0 chr13 47704853 47705028 -72579284 + CT-rich Low_complexity Low_complexity 2 180 0 3 948 485 270 18 0 chr13 47705036 47705147 -72579165 - B1F1 SINE Alu -35 114 2 3 948 242 329 25 0 chr13 47705890 47705969 -72578343 + ID4_ SINE ID 2 82 -1 3 948 1048 191 81 24 chr13 47706245 47706578 -72577734 + MTE2b LTR MaLR 6 379 0 3 948 222 176 0 0 chr13 47706620 47706671 -72577641 + T-rich Low_complexity Low_complexity 1 51 0 3 948 1126 82 7 0 chr13 47707231 47707377 -72576935 - B1_Mus1 SINE Alu 0 148 2 3 948 237 33 0 0 chr13 47707378 47707408 -72576904 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 3 948 601 281 32 69 chr13 47707961 47708179 -72576133 + ID_B1 SINE B4 3 212 -12 3 948 405 0 0 0 chr13 47708814 47708859 -72575453 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 948 739 250 94 59 chr13 47708912 47709167 -72575145 - B4A SINE B4 -12 280 17 3 118 491 323 6 6 chr13 47710084 47710246 -72574066 + RSINE1 SINE B4 4 165 0 3 949 399 41 0 0 chr13 47711650 47711699 -72572613 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 949 324 0 0 0 chr13 47711699 47711734 -72572578 + (GA)n Simple_repeat Simple_repeat 1 36 0 3 949 379 299 75 107 chr13 47712005 47712192 -72572120 + B4 SINE B4 87 267 -25 3 949 2041 158 23 76 chr13 47713316 47713713 -72570599 + ORR1C1 LTR MaLR 3 378 0 3 949 250 330 10 41 chr13 47714264 47714362 -72569950 + PB1D10 SINE Alu 21 115 -2 3 949 508 348 52 0 chr13 47714582 47714737 -72569575 + RSINE1 SINE B4 3 165 0 3 949 309 51 0 0 chr13 47714741 47714780 -72569532 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 949 455 372 60 0 chr13 47715203 47715437 -72568875 + MER2 DNA MER2_type 98 345 0 3 949 4878 2 0 0 chr13 47716413 47716941 -72567371 - L1Md_A LINE L1 0 6582 6055 3 949 810 180 0 0 chr13 47717033 47717211 -72567101 + (CA)n Simple_repeat Simple_repeat 2 179 0 3 949 204 317 36 63 chr13 47718284 47718395 -72565917 + MIR3 SINE MIR 93 200 -8 3 949 828 237 100 33 chr13 47718865 47719105 -72565207 + B4A SINE B4 5 260 -32 3 949 286 300 20 20 chr13 47719584 47719686 -72564626 - MTEb LTR MaLR 0 379 278 3 949 195 42 0 0 chr13 47719796 47719820 -72564492 + (CAGA)n Simple_repeat Simple_repeat 2 25 0 3 949 799 180 92 18 chr13 47719978 47720142 -72564170 + Lx4A LINE L1 6883 7058 0 3 949 958 291 97 20 chr13 47720501 47720851 -72563461 - Lx5 LINE L1 -3 7047 6671 3 949 613 270 18 24 chr13 47720857 47721024 -72563288 - B3 SINE B2 -50 166 1 3 949 373 227 27 0 chr13 47721611 47721686 -72562626 - ID4_ SINE ID 0 83 7 3 949 4096 22 0 2 chr13 47721697 47722161 -72562151 - L1Md_F2 LINE L1 -14 6568 6106 3 949 9979 207 30 30 chr13 47722755 47723072 -72561240 - Lx7 LINE L1 0 7696 7389 3 949 243 88 0 0 chr13 47723072 47723106 -72561206 + (TATATG)n Simple_repeat Simple_repeat 2 35 0 3 949 9979 207 30 30 chr13 47723106 47723137 -72561175 - Lx7 LINE L1 -308 7388 7361 3 949 354 98 0 0 chr13 47723137 47723188 -72561124 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 3 949 9979 200 41 32 chr13 47723188 47725727 -72558585 - Lx7 LINE L1 -336 7360 4787 3 949 242 377 0 0 chr13 47727443 47727512 -72556800 - ID4 SINE ID -9 74 6 3 949 1305 78 0 0 chr13 47727586 47727765 -72556547 + (TG)n Simple_repeat Simple_repeat 1 179 0 3 949 483 346 15 117 chr13 47727820 47728026 -72556286 - ID_B1 SINE B4 -4 220 36 3 949 228 289 19 0 chr13 47728036 47728088 -72556224 + B3A SINE B2 128 180 -18 3 949 222 231 0 0 chr13 47728407 47728459 -72555853 + T-rich Low_complexity Low_complexity 1 52 0 3 949 653 305 51 46 chr13 47728575 47728988 -72555324 - Lx9 LINE L1 -33 7611 7197 3 949 631 0 25 0 chr13 47729111 47729190 -72555122 + (TTCC)n Simple_repeat Simple_repeat 2 82 0 3 949 308 311 28 28 chr13 47729203 47729312 -72555000 - B1F SINE Alu -40 109 1 3 949 1164 213 23 0 chr13 47730199 47730415 -72553897 - URR1B DNA MER1_type 0 225 5 3 949 455 333 52 0 chr13 47730448 47730601 -72553711 - MER58A DNA MER1_type -36 188 28 3 949 229 278 18 18 chr13 47732508 47732563 -72551749 - L2b LINE L2 -16 3359 3305 3 949 260 287 0 69 chr13 47732846 47732947 -72551365 - MER45C DNA Tip100 -40 913 820 3 949 192 149 0 0 chr13 47732954 47733001 -72551311 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 3 949 380 256 48 24 chr13 47733109 47733233 -72551079 - B1F1 SINE Alu -18 131 5 4 949 330 317 23 41 chr13 47734044 47734164 -72550148 + Lx8 LINE L1 7214 7331 -142 4 949 423 0 0 0 chr13 47734164 47734211 -72550101 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 949 330 317 23 41 chr13 47734211 47734261 -72550051 + Lx8 LINE L1 7332 7380 -93 4 949 276 0 68 0 chr13 47734263 47734307 -72550005 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 949 581 147 9 0 chr13 47734517 47734626 -72549686 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 4 949 221 322 83 51 chr13 47734735 47734892 -72549420 - L2b LINE L2 -850 2569 2408 3 949 315 113 0 0 chr13 47734923 47734976 -72549336 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 949 224 272 85 21 chr13 47734985 47734999 -72549313 - L2b LINE L2 -985 2434 2419 3 949 556 281 75 89 chr13 47734999 47735280 -72549032 - B4A SINE B4 -14 278 2 4 949 224 272 85 21 chr13 47735280 47735359 -72548953 - L2b LINE L2 -1001 2418 2337 3 949 874 174 136 0 chr13 47735421 47735656 -72548656 - Lx9 LINE L1 -1 7643 7377 4 949 207 333 43 49 chr13 47735686 47735850 -72548462 - L2b LINE L2 -1148 2271 2109 3 949 987 41 0 0 chr13 47736029 47736152 -72548160 + B1_Mus2 SINE Alu 25 147 0 4 949 330 281 82 27 chr13 47736298 47736461 -72547851 - MLT2D LTR ERVL -375 181 5 4 949 205 282 200 46 chr13 47736497 47736757 -72547555 - L2b LINE L2 -1611 1808 1509 3 949 428 293 35 39 chr13 47737031 47737233 -72547079 - L1MA4 LINE L1 -300 6000 5804 4 949 931 323 70 6 chr13 47737339 47737809 -72546503 - L1MA4 LINE L1 -473 5827 5328 4 949 666 215 20 7 chr13 47737831 47737981 -72546331 - B3 SINE B2 0 216 65 4 949 509 295 0 0 chr13 47738023 47738162 -72546150 + L1M2 LINE L1 4111 4249 -1894 4 949 421 322 20 36 chr13 47738163 47738411 -72545901 - L1M3 LINE L1 -2040 4100 3857 4 949 375 33 49 0 chr13 47738505 47738566 -72545746 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 949 221 0 35 0 chr13 47738717 47738746 -72545566 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 4 949 282 266 0 30 chr13 47738782 47738848 -72545464 + RLTR25A LTR ERVK 513 576 -527 4 949 647 88 29 10 chr13 47738790 47738893 -72545419 + B1_Mur3 SINE Alu 45 149 0 4 949 926 96 25 0 chr13 47739220 47739377 -72544935 + (CA)n Simple_repeat Simple_repeat 1 161 0 4 949 237 103 0 0 chr13 47739377 47739388 -72544924 + (CCA)n Simple_repeat Simple_repeat 1 11 0 4 949 1235 76 6 0 chr13 47739388 47739560 -72544752 + (CA)n Simple_repeat Simple_repeat 1 173 0 4 949 237 103 0 0 chr13 47739560 47739587 -72544725 + (CCA)n Simple_repeat Simple_repeat 1 27 0 4 949 273 140 0 0 chr13 47740024 47740081 -72544231 + (CAAA)n Simple_repeat Simple_repeat 1 57 0 4 949 207 0 0 0 chr13 47740081 47740104 -72544208 + (CAAAC)n Simple_repeat Simple_repeat 5 27 0 4 949 347 235 0 10 chr13 47741185 47741284 -72543028 + (TA)n Simple_repeat Simple_repeat 2 99 0 4 949 314 291 37 46 chr13 47741881 47741989 -72542323 - PB1D10 SINE Alu -42 107 1 4 949 215 182 17 83 chr13 47742816 47742876 -72541436 + L2b LINE L2 3317 3372 -3 4 949 218 206 16 0 chr13 47744451 47744514 -72539798 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 949 189 139 0 0 chr13 47744750 47744793 -72539519 + (TTG)n Simple_repeat Simple_repeat 2 44 0 4 949 286 349 117 38 chr13 47746336 47746601 -72537711 - B4A SINE B4 -5 287 2 4 949 435 38 0 0 chr13 47746634 47746687 -72537625 + (TCCCC)n Simple_repeat Simple_repeat 5 57 0 4 949 336 48 0 0 chr13 47746688 47746730 -72537582 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 4 949 317 294 12 36 chr13 47747139 47747305 -72537007 + (CACCAT)n Simple_repeat Simple_repeat 3 164 0 4 949 249 219 30 38 chr13 47747681 47747814 -72536498 - RMER17D LTR ERVK -522 367 236 4 949 366 23 0 0 chr13 47748431 47748474 -72535838 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 949 247 333 12 0 chr13 47748509 47748590 -72535722 - B4 SINE B4 -209 83 2 4 949 432 0 0 0 chr13 47748606 47748654 -72535658 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 949 3817 142 45 21 chr13 47748993 47749611 -72534701 - Lx2B LINE L1 0 7000 6368 4 949 309 51 0 0 chr13 47749814 47749853 -72534459 + (TAA)n Simple_repeat Simple_repeat 1 39 0 4 949 36 70 0 0 chr13 47751609 47751680 -72532632 + AT_rich Low_complexity Low_complexity 1 71 0 4 949 267 301 14 0 chr13 47751696 47751769 -72532543 + ID4_ SINE ID 10 83 0 4 949 593 257 105 84 chr13 47751827 47752112 -72532200 + B4 SINE B4 2 292 0 4 949 321 240 0 0 chr13 47752112 47752208 -72532104 + (CA)n Simple_repeat Simple_repeat 1 96 0 4 949 370 123 18 0 chr13 47752220 47752277 -72532035 + HAL1-3A_ME LINE L1 1979 2036 -822 4 949 219 308 0 0 chr13 47752442 47752494 -72531818 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 949 231 209 0 0 chr13 47753058 47753101 -72531211 + A-rich Low_complexity Low_complexity 3 45 0 4 949 290 285 113 28 chr13 47754873 47755014 -72529298 - RMER15 LTR ERVL 0 575 423 4 949 1794 248 60 48 chr13 47755565 47756132 -72528180 - RLTR20A2 LTR ERVK 0 578 5 4 949 1624 139 75 48 chr13 47756136 47756507 -72527805 - MYSERV16_I-int LTR ERVK 0 2326 1946 4 949 1237 175 83 8 chr13 47756590 47756843 -72527469 - MYSERV16_I-int LTR ERVK -372 1954 1683 4 949 725 287 58 33 chr13 47756844 47757009 -72527303 + RLTR20D LTR ERVK 314 480 -98 4 949 333 0 0 0 chr13 47757009 47757046 -72527266 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 949 725 278 58 36 chr13 47757046 47757132 -72527180 + RLTR20D LTR ERVK 466 561 -7 4 949 286 255 120 126 chr13 47757184 47757359 -72526953 + MTEb LTR MaLR 200 373 -6 4 949 465 172 0 0 chr13 47758848 47758941 -72525371 + CT-rich Low_complexity Low_complexity 2 94 0 4 949 612 268 177 46 chr13 47760383 47760728 -72523584 + MLT1B LTR MaLR 1 390 0 4 949 675 143 0 16 chr13 47760997 47761089 -72523223 + BC1_Mm scRNA scRNA 1 91 -61 4 949 270 0 0 0 chr13 47761089 47761119 -72523193 + (CAA)n Simple_repeat Simple_repeat 1 30 0 4 949 675 143 0 16 chr13 47761119 47761147 -72523165 + BC1_Mm scRNA scRNA 92 119 -33 4 949 700 320 114 61 chr13 47761511 47762056 -72522256 + LTR33C LTR ERVL 49 622 -7 4 949 297 0 0 0 chr13 47762635 47762668 -72521644 + (ATG)n Simple_repeat Simple_repeat 2 34 0 4 949 203 286 45 45 chr13 47763869 47763935 -72520377 + L2b LINE L2 3228 3293 -82 4 949 1160 283 61 56 chr13 47764309 47764908 -72519404 + Lx9 LINE L1 6883 7615 -29 4 949 420 20 0 0 chr13 47765231 47765280 -72519032 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 949 2049 310 61 13 chr13 47766063 47766918 -72517394 - L1MC1 LINE L1 -99 6234 5339 4 949 528 282 291 24 chr13 47766926 47767300 -72517012 - L1MC1 LINE L1 -950 5196 4723 4 949 228 227 38 23 chr13 47768549 47768680 -72515632 + (TTATA)n Simple_repeat Simple_repeat 5 137 0 4 949 182 91 30 0 chr13 47768684 47768717 -72515595 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 949 212 77 0 25 chr13 47768744 47768784 -72515528 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 949 358 276 90 90 chr13 47769098 47769388 -72514924 - B4A SINE B4 -2 290 1 4 949 593 386 41 32 chr13 47769864 47770204 -72514108 + MLT1H1 LTR MaLR 201 543 -12 4 949 215 326 47 0 chr13 47771050 47771136 -72513176 + L2 LINE L2 2543 2632 -787 4 949 291 322 91 70 chr13 47771577 47771907 -72512405 - L1ME3A LINE L1 -226 5947 5611 4 949 313 271 87 104 chr13 47771936 47772302 -72512010 - L1ME3A LINE L1 -1325 4821 4462 4 949 2990 243 54 57 chr13 47772504 47773378 -72510934 - RMER1C Other Other 0 1342 472 4 949 643 242 163 10 chr13 47773496 47773694 -72510618 + MTEa LTR MaLR 1 265 -114 4 949 1438 130 18 14 chr13 47773694 47773913 -72510399 + URR1B DNA MER1_type 5 224 -1 4 949 272 267 161 65 chr13 47773913 47774003 -72510309 + MTEa LTR MaLR 266 371 -8 4 949 239 243 0 0 chr13 47774426 47774496 -72509816 - L1MC4 LINE L1 -1314 6728 6659 4 949 606 203 0 0 chr13 47774509 47774637 -72509675 + (TA)n Simple_repeat Simple_repeat 2 129 0 4 949 366 143 0 0 chr13 47774682 47774745 -72509567 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 949 443 316 65 0 chr13 47775417 47775556 -72508756 - ID_B1 SINE B4 0 224 77 4 949 333 0 0 0 chr13 47776313 47776350 -72507962 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 4 949 245 287 138 0 chr13 47776617 47776704 -72507608 - MER5B DNA MER1_type -1 177 79 4 949 266 361 62 25 chr13 47776777 47776939 -72507373 + MER5B DNA MER1_type 11 178 0 4 949 624 204 0 0 chr13 47777037 47777213 -72507099 + (CA)n Simple_repeat Simple_repeat 2 177 0 4 949 912 214 73 19 chr13 47777274 47777479 -72506833 + B3 SINE B2 1 216 0 4 949 216 0 0 0 chr13 47777483 47777507 -72506805 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 949 751 274 38 0 chr13 47778266 47778478 -72505834 - ID_B1 SINE B4 0 224 5 4 949 1856 273 65 66 chr13 47778574 47779590 -72504722 - L1_Rod LINE L1 -545 5626 4539 4 949 286 348 71 38 chr13 47780204 47780300 -72504012 - MLT1D LTR MaLR -91 414 324 4 949 3727 23 2 0 chr13 47780300 47780695 -72503617 + MTA_Mm LTR MaLR 1 396 0 4 949 286 348 71 38 chr13 47780695 47780754 -72503558 - MLT1D LTR MaLR -182 323 263 4 949 180 0 0 0 chr13 47780754 47780774 -72503538 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 4 949 286 348 71 38 chr13 47780774 47780829 -72503483 - MLT1D LTR MaLR -243 262 196 4 949 191 45 65 22 chr13 47782338 47782384 -72501928 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 4 949 502 234 13 78 chr13 47782815 47782968 -72501344 - RSINE1 SINE B4 -21 144 2 4 949 299 215 15 0 chr13 47783003 47783068 -72501244 + PB1D7 SINE Alu 49 114 -6 4 949 503 31 0 15 chr13 47783131 47783197 -72501115 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 949 570 222 203 45 chr13 47783202 47783424 -72500888 - B4A SINE B4 -35 257 1 4 949 238 318 0 68 chr13 47784109 47784227 -72500085 + L1M1 LINE L1 5802 5911 -389 4 949 513 47 0 0 chr13 47784252 47784316 -72499996 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 949 1047 177 19 24 chr13 47785012 47785220 -72499092 - ORR1C2 LTR MaLR 0 384 178 4 949 463 245 7 7 chr13 47785224 47785372 -72498940 + G-rich Low_complexity Low_complexity 5 152 0 4 949 520 224 124 130 chr13 47785372 47785557 -72498755 - ORR1C2 LTR MaLR -188 186 3 4 949 306 0 0 0 chr13 47785693 47785727 -72498585 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 949 715 308 128 21 chr13 47785728 47785970 -72498342 - B4 SINE B4 -24 268 1 4 949 624 286 90 5 chr13 47785978 47786178 -72498134 - ID_B1 SINE B4 -6 218 2 4 949 186 43 0 0 chr13 47787356 47787379 -72496933 + (A)n Simple_repeat Simple_repeat 1 23 0 4 949 391 289 162 35 chr13 47787756 47788039 -72496273 - L1M5 LINE L1 -1163 4983 4665 4 949 369 0 0 0 chr13 47789915 47789956 -72494356 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 949 883 269 19 84 chr13 47790530 47790839 -72493473 - B4 SINE B4 0 292 4 4 949 543 272 61 7 chr13 47791370 47791518 -72492794 - MER20 DNA MER1_type -57 162 7 5 949 2192 82 3 112 chr13 47792156 47792514 -72491798 - ORR1A2 LTR MaLR -8 319 1 5 949 1185 305 104 33 chr13 47792519 47793001 -72491311 - Lx8 LINE L1 -729 6744 6229 5 949 438 20 0 0 chr13 47793181 47793232 -72491080 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 949 2270 253 122 21 chr13 47793353 47793471 -72490841 - Lx8 LINE L1 -674 5626 5463 5 949 195 42 0 0 chr13 47793471 47793495 -72490817 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 949 2270 284 91 50 chr13 47793495 47794741 -72489571 - Lx8 LINE L1 -418 5462 4161 5 949 1763 181 65 17 chr13 47794779 47795134 -72489178 - ORR1D1 LTR MaLR 0 374 3 5 949 342 0 0 0 chr13 47795416 47795454 -72488858 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 949 258 167 0 0 chr13 47795454 47795521 -72488791 + (TG)n Simple_repeat Simple_repeat 2 68 0 5 949 272 193 0 0 chr13 47795549 47795606 -72488706 + MLT1A1 LTR MaLR 352 408 0 5 949 2175 172 30 73 chr13 47796888 47797086 -72487226 + MTC LTR MaLR 1 209 -212 5 949 1220 44 0 0 chr13 47797086 47797222 -72487090 + B1_Mm SINE Alu 1 136 -11 5 949 468 0 0 0 chr13 47797222 47797274 -72487038 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 5 949 2175 172 30 73 chr13 47797274 47797514 -72486798 + MTC LTR MaLR 210 420 -1 5 949 279 261 8 115 chr13 47797967 47798097 -72486215 + MER104 DNA Tc2 28 143 -38 5 949 287 200 98 24 chr13 47798814 47798896 -72485416 + L1M4 LINE L1 2334 2421 -3725 5 949 328 254 0 0 chr13 47798932 47798995 -72485317 - ID4_ SINE ID -11 72 10 5 949 679 298 134 8 chr13 47799134 47799381 -72484931 + ORR1E LTR MaLR 76 353 -6 5 949 501 62 0 0 chr13 47799518 47799583 -72484729 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 949 333 289 35 9 chr13 47800303 47800418 -72483894 + CT-rich Low_complexity Low_complexity 5 122 0 5 949 273 380 7 42 chr13 47801232 47801375 -72482937 + MamRep38 DNA hAT 61 198 -97 5 949 308 274 0 0 chr13 47801400 47801462 -72482850 + ID4 SINE ID 8 69 -14 5 949 351 113 0 0 chr13 47801923 47801976 -72482336 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 949 231 121 52 0 chr13 47801979 47802037 -72482275 + GA-rich Low_complexity Low_complexity 2 62 0 5 949 591 15 0 0 chr13 47804038 47804106 -72480206 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 949 1306 226 33 66 chr13 47804770 47805102 -72479210 - MTEb LTR MaLR -52 327 7 5 949 251 336 7 69 chr13 47805293 47805437 -72478875 + MIRm SINE MIR 2 136 -140 5 949 237 315 0 14 chr13 47805570 47805644 -72478668 + L1M2 LINE L1 2654 2726 -3417 5 949 558 173 0 0 chr13 47805649 47805753 -72478559 + CT-rich Low_complexity Low_complexity 1 104 0 5 949 260 324 78 9 chr13 47805753 47805973 -72478339 + L1M2 LINE L1 2786 3018 -3122 5 949 25 51 0 0 chr13 47805992 47806031 -72478281 + AT_rich Low_complexity Low_complexity 1 39 0 5 949 1210 305 46 6 chr13 47806039 47806563 -72477749 + L1M2 LINE L1 3007 3551 -2592 5 949 1274 313 83 30 chr13 47806601 47807135 -72477177 + ORR1E-int LTR MaLR 966 1528 -52 5 949 786 304 119 22 chr13 47807135 47807454 -72476858 + ORR1E LTR MaLR 2 351 -8 5 949 195 157 0 0 chr13 47807669 47807720 -72476592 + T-rich Low_complexity Low_complexity 1 51 0 5 949 234 128 0 0 chr13 47808879 47808918 -72475394 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 5 949 618 276 141 7 chr13 47808936 47809235 -72475077 - L1MC1 LINE L1 -7 6326 5988 5 949 254 295 51 51 chr13 47809288 47809406 -72474906 + MLT1A1 LTR MaLR 172 289 -119 5 949 374 188 69 50 chr13 47809562 47809663 -72474649 + MTD LTR MaLR 317 419 0 5 949 250 248 18 2 chr13 47809735 47809800 -72474512 + ID4 SINE ID 15 79 -73 5 949 1022 272 106 32 chr13 47809828 47810424 -72473888 - L1MCa LINE L1 -4709 2042 1403 5 949 712 197 102 38 chr13 47810427 47810633 -72473679 - MTD LTR MaLR -14 405 176 5 949 686 316 110 48 chr13 47810633 47811038 -72473274 - L1MCa LINE L1 -5683 1068 664 5 949 366 23 0 0 chr13 47811038 47811081 -72473231 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 949 402 21 0 0 chr13 47811081 47811127 -72473185 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 949 686 338 129 46 chr13 47811127 47811491 -72472821 - L1MCa LINE L1 -6088 663 266 5 949 3582 38 2 0 chr13 47812155 47812550 -72471762 + MTA_Mm LTR MaLR 1 396 0 5 949 452 251 165 16 chr13 47813101 47813283 -72471029 - ORR1D2 LTR MaLR -2 382 174 5 949 228 267 48 36 chr13 47813249 47813416 -72470896 - RMER17C LTR ERVK -153 257 89 5 949 545 267 123 6 chr13 47813405 47813567 -72470745 - ORR1D2 LTR MaLR -189 181 1 5 949 385 19 18 18 chr13 47814136 47814191 -72470121 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 949 896 235 72 8 chr13 47814966 47815228 -72469084 - L1MC1 LINE L1 -1 6332 6054 5 949 466 329 78 17 chr13 47815252 47815611 -72468701 - L1MC1 LINE L1 -352 5981 5601 5 949 2515 105 9 0 chr13 47815720 47816044 -72468268 - ORR1A2 LTR MaLR 0 327 1 5 949 1022 159 16 37 chr13 47816522 47816711 -72467601 - B2_Mm2 SINE B2 -10 185 1 5 949 2149 149 21 55 chr13 47817466 47817849 -72466463 + ORR1C1 LTR MaLR 1 370 -8 5 949 225 0 0 0 chr13 47818767 47818792 -72465520 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 949 217 222 0 0 chr13 47818805 47818850 -72465462 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 949 349 333 21 14 chr13 47818907 47819047 -72465265 - B4A SINE B4 -20 272 132 5 949 1665 227 40 69 chr13 47819174 47819623 -72464689 - RMER15 LTR ERVL -113 462 27 5 949 331 283 33 0 chr13 47820877 47820969 -72463343 - PB1D10 SINE Alu -16 101 7 5 949 2654 183 31 89 chr13 47821406 47821946 -72462366 - RLTR18B LTR ERVK 0 512 4 5 949 233 188 31 0 chr13 47821947 47822011 -72462301 + (TA)n Simple_repeat Simple_repeat 1 66 0 5 949 6463 158 21 24 chr13 47822604 47824074 -72460238 + Lx2B LINE L1 4712 6994 -6 5 949 499 290 65 67 chr13 47824410 47824610 -72459702 + B3A SINE B2 1 197 -19 5 949 275 317 0 12 chr13 47824634 47824717 -72459595 + (CATATA)n Simple_repeat Simple_repeat 1 82 0 5 949 479 253 188 24 chr13 47825132 47825302 -72459010 + B3A SINE B2 1 198 0 5 949 262 191 167 0 chr13 47826785 47826869 -72457443 + L1MB7 LINE L1 3362 3459 -2687 5 949 326 245 21 21 chr13 47826874 47826970 -72457342 + L1MB7 LINE L1 4556 4651 -1495 5 949 201 39 0 0 chr13 47827034 47827060 -72457252 + (TAAAAA)n Simple_repeat Simple_repeat 4 29 0 5 949 22 35 0 0 chr13 47827273 47827302 -72457010 + AT_rich Low_complexity Low_complexity 1 29 0 5 949 249 292 45 0 chr13 47827433 47827522 -72456790 + L1MB7 LINE L1 5384 5476 -702 5 949 618 347 72 11 chr13 47827619 47828066 -72456246 + L1MB7 LINE L1 5683 6161 -17 5 949 413 232 0 12 chr13 47828079 47828162 -72456150 + ID2 SINE ID 2 83 0 5 949 343 302 17 177 chr13 47828372 47828609 -72455703 - MER2 DNA MER2_type -22 323 125 5 949 371 360 11 75 chr13 47829551 47829737 -72454575 + ID_B1 SINE B4 33 206 -18 5 949 180 0 0 0 chr13 47829806 47829826 -72454486 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 5 949 349 270 68 0 chr13 47829826 47829934 -72454378 - B1F SINE Alu -23 126 3 5 949 845 296 7 63 chr13 47830487 47830790 -72453522 - B4A SINE B4 -6 286 1 5 949 207 100 0 0 chr13 47831748 47831778 -72452534 + (A)n Simple_repeat Simple_repeat 1 30 0 5 949 540 295 36 59 chr13 47832928 47833148 -72451164 + Tigger5 DNA MER2_type 25 239 -2167 5 949 232 307 165 0 chr13 47833994 47834121 -72450191 - MIR SINE MIR -56 206 59 5 949 1407 164 0 26 chr13 47834151 47834383 -72449929 + URR1A DNA MER1_type 1 226 0 5 949 1938 241 9 78 chr13 47834457 47834978 -72449334 + RMER19C LTR ERVK 115 611 0 5 949 39344 6 0 0 chr13 47835356 47840933 -72443379 + L1Md_A LINE L1 10 5586 -297 5 118 9626 2 0 0 chr13 47840933 47841929 -72442383 + L1Md_A LINE L1 5587 6582 0 5 950 260 369 0 0 chr13 47842063 47842128 -72442184 + RSINE1 SINE B4 89 153 -12 5 950 465 125 0 0 chr13 47842129 47842217 -72442095 + (TC)n Simple_repeat Simple_repeat 1 88 0 5 950 185 409 18 9 chr13 47842727 47842838 -72441474 - MIR SINE MIR -107 155 44 5 950 1052 233 61 37 chr13 47843253 47843547 -72440765 + MTEa LTR MaLR 1 301 -78 5 950 192 77 0 0 chr13 47843598 47843624 -72440688 + (A)n Simple_repeat Simple_repeat 1 26 0 5 950 276 102 0 0 chr13 47844108 47844157 -72440155 + (T)n Simple_repeat Simple_repeat 1 49 0 5 950 572 315 0 41 chr13 47844773 47844858 -72439454 + ID SINE ID 2 79 -145 5 950 228 276 37 101 chr13 47844858 47844967 -72439345 + PB1D7 SINE Alu 3 104 -16 5 950 1622 254 46 8 chr13 47844982 47845355 -72438957 + Lx6 LINE L1 6915 7301 -159 5 950 273 57 0 0 chr13 47845380 47845415 -72438897 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 950 1208 72 0 0 chr13 47845415 47845554 -72438758 - B1_Mm SINE Alu -7 140 2 5 950 345 228 38 38 chr13 47845587 47845692 -72438620 + Lx7 LINE L1 7565 7669 -27 5 950 2172 70 11 25 chr13 47845717 47845996 -72438316 - L1Md_F2 LINE L1 -12 6570 6296 5 950 637 298 33 28 chr13 47846263 47846474 -72437838 - B3 SINE B2 -3 213 2 5 950 362 319 9 0 chr13 47846535 47846651 -72437661 - Tigger16a DNA Tigger -78 855 739 5 950 357 314 148 5 chr13 47846540 47846742 -72437570 - Tigger16a DNA TcMar -257 676 446 5 950 233 228 24 71 chr13 47847016 47847082 -72437230 + Cheshire DNA MER1_type 684 745 -1675 5 950 592 312 7 0 chr13 47847082 47847223 -72437089 + B1F SINE Alu 1 142 -7 5 950 1183 295 75 86 chr13 47847462 47847562 -72436750 + L1M3c LINE L1 818 928 -5213 5 950 923 261 23 23 chr13 47847562 47847778 -72436534 + B3 SINE B2 1 216 0 5 950 1183 295 75 86 chr13 47847778 47847927 -72436385 + L1M3c LINE L1 929 1073 -5068 5 950 195 42 0 0 chr13 47847927 47847951 -72436361 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5 950 1183 295 75 86 chr13 47847951 47848512 -72435800 + L1M3c LINE L1 1074 1620 -4521 5 950 850 260 86 84 chr13 47848510 47849009 -72435303 + L1M3c LINE L1 3487 3986 -2221 5 950 218 56 0 27 chr13 47849076 47849113 -72435199 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 5 950 509 0 16 0 chr13 47849260 47849321 -72434991 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 950 516 235 31 0 chr13 47849324 47849422 -72434890 + B3 SINE B2 85 185 -31 5 950 2410 97 6 0 chr13 47849955 47850297 -72434015 + MusHAL1 LINE L1 1113 1456 -1256 5 950 306 0 0 0 chr13 47850462 47850496 -72433816 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 950 625 242 8 0 chr13 47850535 47850659 -72433653 - RSINE1 SINE B4 -36 129 5 5 950 609 14 0 0 chr13 47850659 47850729 -72433583 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 950 345 309 76 46 chr13 47851019 47851321 -72432991 + L1MC3 LINE L1 5933 6243 -90 6 950 465 148 0 0 chr13 47851339 47851420 -72432892 + (CA)n Simple_repeat Simple_repeat 1 81 0 6 950 697 236 7 20 chr13 47851842 47851989 -72432323 + B1_Mur2 SINE Alu 2 146 -3 6 950 1058 279 103 55 chr13 47852038 47852273 -72432039 + L1MC3 LINE L1 6368 6634 -1151 6 950 546 63 0 0 chr13 47852273 47852352 -72431960 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 6 950 1058 279 103 55 chr13 47852352 47852658 -72431654 + L1MC3 LINE L1 6635 6934 -851 6 950 1748 213 10 52 chr13 47852739 47853125 -72431187 - ORR1C1 LTR MaLR -6 372 3 6 950 349 369 114 75 chr13 47853850 47854210 -72430102 - LTR16E2 LTR ERVL 0 568 195 6 950 379 332 107 88 chr13 47854365 47854438 -72429874 - MTE-int LTR MaLR -648 932 863 6 950 3986 81 9 34 chr13 47854438 47854991 -72429321 + L1Md_F2 LINE L1 6044 6582 0 6 950 379 335 107 86 chr13 47854991 47855353 -72428959 - MTE-int LTR MaLR -792 943 553 6 950 717 332 101 27 chr13 47855449 47855786 -72428526 - MTE-int LTR MaLR -1218 362 1 6 950 209 368 73 47 chr13 47856591 47856825 -72427487 - L2c LINE L2 -17 3370 3131 6 950 186 43 0 0 chr13 47857230 47857253 -72427059 + (TCC)n Simple_repeat Simple_repeat 2 24 0 6 950 402 265 0 73 chr13 47857859 47857969 -72426343 + PB1D10 SINE Alu 3 104 -13 6 950 239 310 20 10 chr13 47858549 47858650 -72425662 + MIR SINE MIR 90 191 -71 6 950 191 36 36 0 chr13 47859871 47859899 -72424413 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 950 185 0 40 0 chr13 47861351 47861376 -72422936 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 950 1709 196 95 32 chr13 47861985 47862365 -72421947 + MTC LTR MaLR 17 420 -1 6 950 225 279 106 0 chr13 47862554 47862658 -72421654 - Charlie1a DNA MER1_type -299 1156 1042 6 950 257 225 34 91 chr13 47862663 47862751 -72421561 - Charlie1a DNA MER1_type -1122 333 251 6 950 437 228 0 0 chr13 47862766 47862845 -72421467 - Lx9 LINE L1 -1225 6419 6341 6 950 280 309 14 41 chr13 47862849 47862994 -72421318 - L1_Rod LINE L1 -6947 225 85 6 950 219 361 0 0 chr13 47863616 47863688 -72420624 - ID4 SINE ID -9 74 3 6 950 718 148 11 0 chr13 47863742 47863918 -72420394 + GA-rich Low_complexity Low_complexity 2 179 0 6 950 730 199 19 56 chr13 47864151 47864311 -72420001 + RSINE1 SINE B4 11 164 -1 6 950 892 273 46 81 chr13 47865022 47865456 -72418856 - MTD LTR MaLR 0 419 1 6 950 455 298 82 10 chr13 47865732 47865931 -72418381 + B4 SINE B4 69 280 -12 6 950 21 0 0 0 chr13 47866053 47866074 -72418238 + GC_rich Low_complexity Low_complexity 1 21 0 6 950 297 151 0 0 chr13 47866604 47866657 -72417655 + A-rich Low_complexity Low_complexity 1 53 0 6 950 312 272 75 37 chr13 47867093 47867200 -72417112 + B1F1 SINE Alu 14 124 -25 6 950 297 0 0 0 chr13 47867213 47867246 -72417066 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 6 950 2598 161 121 15 chr13 47867265 47867737 -72416575 + RLTR28 LTR ERVL 1 522 -2 6 950 381 339 36 40 chr13 47867766 47868070 -72416242 - L1ME3A LINE L1 -24 6149 5847 6 950 212 0 36 0 chr13 47868402 47868430 -72415882 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 950 232 308 101 13 chr13 47868438 47868596 -72415716 - L1ME3A LINE L1 -691 5482 5311 6 950 280 349 11 23 chr13 47868865 47869041 -72415271 - L1ME3A LINE L1 -1278 4868 4695 6 950 25 0 0 0 chr13 47869062 47869087 -72415225 + AT_rich Low_complexity Low_complexity 1 25 0 6 950 25 0 0 0 chr13 47869185 47869210 -72415102 + AT_rich Low_complexity Low_complexity 1 25 0 6 950 2603 131 43 15 chr13 47869358 47869754 -72414558 + MTB_Mm LTR MaLR 1 407 0 6 950 508 310 7 40 chr13 47871601 47871752 -72412560 + RSINE1 SINE B4 2 147 -18 6 950 342 115 0 0 chr13 47871762 47871814 -72412498 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 950 839 10 10 0 chr13 47873473 47873573 -72410739 + (TC)n Simple_repeat Simple_repeat 2 102 0 6 950 225 0 0 0 chr13 47873573 47873597 -72410715 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 950 244 164 68 14 chr13 47873599 47873673 -72410639 + (TCTCTG)n Simple_repeat Simple_repeat 6 83 0 6 950 225 108 0 0 chr13 47873675 47873712 -72410600 + (C)n Simple_repeat Simple_repeat 1 37 0 6 950 410 225 22 0 chr13 47874875 47874964 -72409348 + B4A SINE B4 198 288 -4 6 950 3357 80 9 22 chr13 47875028 47875488 -72408824 + Lx2A LINE L1 6544 6997 -11 6 950 1718 330 44 77 chr13 47876684 47877494 -72406818 - MER21B LTR ERV1 -58 805 22 6 950 465 19 0 0 chr13 47877582 47877636 -72406676 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 950 27 62 0 0 chr13 47880523 47880571 -72403741 + AT_rich Low_complexity Low_complexity 1 48 0 6 950 264 122 0 0 chr13 47880921 47880962 -72403350 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 950 218 313 132 0 chr13 47880970 47881053 -72403259 - ID_B1 SINE B4 -53 171 78 6 950 180 0 0 0 chr13 47881105 47881125 -72403187 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 950 370 293 24 0 chr13 47881247 47881329 -72402983 - B4A SINE B4 -174 118 35 6 950 251 333 0 0 chr13 47881370 47881430 -72402882 - B1F SINE Alu -89 60 1 6 950 414 0 0 0 chr13 47882680 47882726 -72401586 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 950 745 351 81 13 chr13 47883258 47883630 -72400682 + MLT1J2 LTR MaLR 16 412 -36 6 950 1029 261 159 27 chr13 47884184 47884518 -72399794 - MTEa LTR MaLR 0 379 2 6 950 214 167 0 0 chr13 47885765 47885807 -72398505 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 950 282 29 0 0 chr13 47885807 47885842 -72398470 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 6 950 304 301 0 14 chr13 47886090 47886164 -72398148 + ID4 SINE ID 7 79 -4 6 950 237 309 22 90 chr13 47886164 47886179 -72398133 + B3A SINE B2 7 89 -109 6 950 255 79 0 0 chr13 47886277 47886315 -72397997 + (ATG)n Simple_repeat Simple_repeat 3 40 0 6 950 9042 26 0 0 chr13 47886460 47887442 -72396870 + L1Md_T LINE L1 5600 6581 -1 6 950 225 265 0 0 chr13 47888344 47888393 -72395919 + ZP3AR Satellite Satellite 36 84 -128 6 950 321 265 0 0 chr13 47888351 47888419 -72395893 + ID4_ SINE ID 1 68 -15 6 950 312 294 24 0 chr13 47888419 47888436 -72395876 + ID SINE ID 1 87 -137 6 950 235 281 16 0 chr13 47888778 47888842 -72395470 + RMER15 LTR ERVL 1 65 -510 6 950 1859 218 136 17 chr13 47888861 47889333 -72394979 + RMER15 LTR ERVL 30 557 -18 6 950 238 274 86 63 chr13 47889637 47889812 -72394500 - L1ME4a LINE L1 -12 6112 5934 6 950 298 191 0 43 chr13 47890328 47890421 -72393891 + CT-rich Low_complexity Low_complexity 2 90 0 6 950 423 0 0 0 chr13 47891720 47891767 -72392545 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 950 893 266 14 0 chr13 47892708 47892915 -72391397 + B3 SINE B2 1 210 -6 6 950 216 316 0 0 chr13 47893785 47893842 -72390470 + MIR3 SINE MIR 146 202 -6 6 950 1303 296 78 53 chr13 47894113 47894740 -72389572 - L1MA7 LINE L1 -169 6122 5480 6 950 182 244 33 99 chr13 47895059 47895150 -72389162 + MIRb SINE MIR 123 207 -61 6 950 220 233 0 0 chr13 47895387 47895430 -72388882 + (TATG)n Simple_repeat Simple_repeat 2 44 0 6 950 1369 257 118 63 chr13 47895708 47896344 -72387968 + Lx9 LINE L1 6968 7638 -6 6 950 269 296 14 14 chr13 47896742 47896814 -72387498 + ID4_ SINE ID 1 72 -11 6 950 350 196 31 52 chr13 47897835 47897932 -72386380 + MTEb LTR MaLR 254 348 -31 6 950 285 75 0 0 chr13 47898146 47898186 -72386126 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 950 270 0 0 0 chr13 47899560 47899590 -72384722 + (A)n Simple_repeat Simple_repeat 1 30 0 6 950 396 0 0 0 chr13 47900394 47900438 -72383874 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 950 327 164 0 0 chr13 47900438 47900499 -72383813 + GA-rich Low_complexity Low_complexity 2 62 0 6 950 313 247 14 0 chr13 47901009 47901082 -72383230 - L1MD LINE L1 -927 5219 5146 6 950 690 284 77 71 chr13 47901083 47901386 -72382926 + B4 SINE B4 8 292 0 6 950 4113 134 19 18 chr13 47901943 47902609 -72381703 - Lx2 LINE L1 -206 6791 6125 6 950 1095 156 55 0 chr13 47902610 47902809 -72381503 + Lx2A1 LINE L1 6799 7008 0 6 950 1232 271 62 14 chr13 47902933 47903288 -72381024 + Lx8 LINE L1 6964 7335 -138 6 950 21 0 0 0 chr13 47904809 47904830 -72379482 + AT_rich Low_complexity Low_complexity 1 21 0 6 950 2304 155 50 41 chr13 47906131 47906402 -72377910 - BGLII_B LTR ERVK 0 441 183 6 950 741 53 0 0 chr13 47906402 47906496 -72377816 + (TC)n Simple_repeat Simple_repeat 1 94 0 6 950 2304 155 50 41 chr13 47906496 47906661 -72377651 - BGLII_B LTR ERVK -259 182 1 6 950 545 273 40 46 chr13 47907838 47908011 -72376301 + ID_B1 SINE B4 42 213 -11 6 950 4271 170 59 75 chr13 47908701 47909593 -72374719 + RMER19B LTR ERVK 13 890 -12 6 950 613 137 8 8 chr13 47909789 47909907 -72374405 + (TA)n Simple_repeat Simple_repeat 2 119 0 6 950 900 266 87 7 chr13 47909923 47910233 -72374079 - L1MA4 LINE L1 -341 5959 5625 6 950 344 265 41 13 chr13 47910252 47910363 -72373949 + B1F SINE Alu 1 117 -32 6 950 354 301 26 26 chr13 47910480 47910596 -72373716 + PB1D10 SINE Alu 1 116 -1 6 950 752 278 28 23 chr13 47910865 47911079 -72373233 - B3 SINE B2 -1 215 1 6 950 1195 55 52 5 chr13 47911523 47911890 -72372422 + (TAGA)n Simple_repeat Simple_repeat 1 384 0 6 950 366 225 59 13 chr13 47911944 47912097 -72372215 + (TAGA)n Simple_repeat Simple_repeat 3 162 0 6 950 1563 209 68 3 chr13 47912097 47912433 -72371879 + ORR1D1 LTR MaLR 8 365 -9 6 950 585 317 49 16 chr13 47912616 47912860 -72371452 - L1MA4 LINE L1 -1044 5099 4848 6 950 22 35 0 0 chr13 47913035 47913064 -72371248 + AT_rich Low_complexity Low_complexity 1 29 0 6 950 27 29 0 0 chr13 47913156 47913190 -72371122 + AT_rich Low_complexity Low_complexity 1 34 0 6 950 483 130 0 0 chr13 47913229 47913306 -72371006 + (TCC)n Simple_repeat Simple_repeat 2 78 0 6 950 200 250 15 15 chr13 47914046 47914111 -72370201 + (CATATA)n Simple_repeat Simple_repeat 6 70 0 6 950 218 91 73 0 chr13 47914112 47914167 -72370145 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 6 950 333 0 0 0 chr13 47915019 47915056 -72369256 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 950 377 193 125 0 chr13 47915095 47915183 -72369129 - B1_Mur2 SINE Alu -24 125 27 7 950 777 22 0 0 chr13 47915415 47915506 -72368806 + (TTCTC)n Simple_repeat Simple_repeat 4 94 0 7 950 377 300 48 36 chr13 47915739 47915905 -72368407 - MLT1I LTR MaLR -67 344 177 7 950 340 327 51 44 chr13 47916673 47916948 -72367364 + L1MCc LINE L1 1207 1483 -4940 7 950 627 265 69 17 chr13 47916953 47917126 -72367186 + B3A SINE B2 1 182 -16 7 950 339 65 0 0 chr13 47917138 47917184 -72367128 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 950 603 278 120 48 chr13 47917880 47918452 -72365860 - L1M5 LINE L1 -2661 3485 2881 7 950 25 31 0 0 chr13 47918738 47918770 -72365542 + AT_rich Low_complexity Low_complexity 1 32 0 7 950 562 314 101 78 chr13 47918794 47919458 -72364854 + L1M4b LINE L1 992 1670 -5664 7 950 539 333 44 12 chr13 47920011 47920260 -72364052 - L1M5 LINE L1 -410 5714 5458 7 950 295 242 45 0 chr13 47920952 47921018 -72363294 - ID4 SINE ID -12 71 3 7 950 456 203 16 56 chr13 47921098 47921223 -72363089 + B1_Mur2 SINE Alu 24 143 -6 7 950 329 62 0 20 chr13 47921372 47921421 -72362891 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 7 950 366 253 33 11 chr13 47921473 47921565 -72362747 + PB1D10 SINE Alu 24 117 0 7 950 638 298 11 16 chr13 47921856 47922040 -72362272 + B3A SINE B2 2 184 -14 7 950 23 0 0 0 chr13 47922040 47922063 -72362249 + AT_rich Low_complexity Low_complexity 1 23 0 7 950 737 325 80 21 chr13 47922298 47922634 -72361678 + Lx8 LINE L1 6940 7295 -178 7 950 413 263 194 19 chr13 47923877 47924032 -72360280 + B4 SINE B4 48 229 -63 7 950 204 330 265 19 chr13 47924205 47924801 -72359511 - L2 LINE L2 -570 2849 2107 7 950 396 0 0 0 chr13 47924833 47924877 -72359435 + (TAGA)n Simple_repeat Simple_repeat 2 45 0 7 950 683 88 45 34 chr13 47924902 47925078 -72359234 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 7 950 489 321 65 58 chr13 47926360 47926621 -72357691 - ORR1E LTR MaLR -78 281 19 7 950 861 180 232 11 chr13 47928580 47928765 -72355547 - URR1A DNA MER1_type 0 226 1 7 950 474 245 9 9 chr13 47929217 47929324 -72354988 + RCHARR1 DNA MER1_type 1 107 -867 7 950 1043 67 27 18 chr13 47929324 47929771 -72354541 + (TAGA)n Simple_repeat Simple_repeat 1 451 0 7 950 855 275 80 44 chr13 47929789 47929835 -72354477 + RCHARR1 DNA MER1_type 117 163 -811 7 950 3795 38 28 0 chr13 47929835 47930259 -72354053 + RLTR10C LTR ERVK 1 436 0 7 950 855 275 80 44 chr13 47930259 47930551 -72353761 + RCHARR1 DNA MER1_type 164 467 -507 7 950 601 245 72 19 chr13 47930550 47930758 -72353554 + RCHARR1 DNA MER1_type 748 966 -8 7 950 292 338 140 12 chr13 47931225 47931468 -72352844 + B4A SINE B4 1 274 -18 7 950 293 82 0 20 chr13 47931569 47931619 -72352693 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 950 217 289 85 49 chr13 47931862 47932026 -72352286 - MIR3 SINE MIR -21 187 18 7 950 1269 265 40 11 chr13 47932026 47932373 -72351939 + ORR1E LTR MaLR 1 357 -2 7 950 500 237 0 58 chr13 47933352 47933473 -72350839 + PB1D10 SINE Alu 1 114 -3 7 950 384 245 32 0 chr13 47934395 47934489 -72349823 + B3A SINE B2 1 97 -101 7 950 2373 147 93 85 chr13 47934494 47934928 -72349384 + RLTR24 LTR ERV1 19 431 -98 7 950 288 0 0 0 chr13 47934928 47934960 -72349352 + (TAA)n Simple_repeat Simple_repeat 2 33 0 7 950 2373 147 93 85 chr13 47934960 47935032 -72349280 + RLTR24 LTR ERV1 432 528 -1 7 950 431 269 33 52 chr13 47935032 47935138 -72349174 + B3A SINE B2 96 198 0 7 950 234 0 0 0 chr13 47935222 47935248 -72349064 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 7 950 370 233 22 92 chr13 47935740 47935799 -72348513 - B3A SINE B2 -7 209 158 7 950 354 45 0 0 chr13 47935799 47935843 -72348469 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 950 370 213 22 90 chr13 47935843 47935932 -72348380 - B3A SINE B2 -40 158 73 7 950 468 0 0 0 chr13 47936483 47936535 -72347777 + (TTCC)n Simple_repeat Simple_repeat 2 53 0 7 950 789 74 8 16 chr13 47936553 47936677 -72347635 + (TCC)n Simple_repeat Simple_repeat 3 125 0 7 950 249 387 71 67 chr13 47936711 47937176 -72347136 + MLT1L LTR MaLR 119 585 -25 7 950 21 0 0 0 chr13 47937298 47937319 -72346993 + AT_rich Low_complexity Low_complexity 1 21 0 7 950 306 316 34 34 chr13 47938130 47938248 -72346064 - MLT1A0 LTR MaLR -247 118 1 7 950 188 267 0 0 chr13 47938478 47938523 -72345789 - MIRm SINE MIR -30 246 202 7 950 237 33 0 0 chr13 47938687 47938717 -72345595 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 7 950 716 112 6 26 chr13 47939783 47939939 -72344373 + (TTTC)n Simple_repeat Simple_repeat 3 155 0 7 950 578 273 46 7 chr13 47939952 47940103 -72344209 - B4 SINE B4 -120 172 16 7 950 288 0 0 0 chr13 47940394 47940426 -72343886 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 950 404 318 84 57 chr13 47940463 47940690 -72343622 - B4A SINE B4 -58 234 2 7 950 679 235 53 116 chr13 47940795 47941002 -72343310 + B3 SINE B2 1 194 -1 7 950 229 25 98 37 chr13 47941054 47941136 -72343176 + (TA)n Simple_repeat Simple_repeat 1 87 0 7 950 899 65 8 0 chr13 47941637 47941760 -72342552 + (GAAA)n Simple_repeat Simple_repeat 4 127 0 7 950 397 306 10 20 chr13 47941867 47941967 -72342345 + RSINE1 SINE B4 24 122 -43 7 950 420 20 0 0 chr13 47941967 47942016 -72342296 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 950 504 0 0 0 chr13 47943215 47943271 -72341041 + (GA)n Simple_repeat Simple_repeat 1 56 0 7 950 335 292 0 0 chr13 47943291 47943356 -72340956 - PB1D7 SINE Alu -55 65 1 7 950 608 171 6 0 chr13 47945820 47945984 -72338328 + (TG)n Simple_repeat Simple_repeat 2 166 0 7 950 223 167 24 0 chr13 47946087 47946129 -72338183 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 950 288 0 0 0 chr13 47946170 47946202 -72338110 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 950 306 276 110 17 chr13 47947097 47947215 -72337097 + L1MC1 LINE L1 6002 6130 -203 7 950 641 229 80 46 chr13 47947278 47947442 -72336870 + B3 SINE B2 1 195 -21 7 950 282 56 0 0 chr13 47947458 47947494 -72336818 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 7 950 201 278 0 0 chr13 47948306 47948360 -72335952 + (TA)n Simple_repeat Simple_repeat 2 55 0 7 950 226 231 0 19 chr13 47948444 47948497 -72335815 + L1MC4 LINE L1 7781 7832 -210 7 950 360 0 0 0 chr13 47948716 47948756 -72335556 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 950 674 320 71 8 chr13 47949689 47949941 -72334371 + B4A SINE B4 5 272 -20 7 950 339 246 11 39 chr13 47950350 47950532 -72333780 + GA-rich Low_complexity Low_complexity 4 180 0 7 950 564 81 0 0 chr13 47952183 47952270 -72332042 + (TG)n Simple_repeat Simple_repeat 2 88 0 7 950 276 100 0 0 chr13 47952495 47952535 -72331777 + (A)n Simple_repeat Simple_repeat 1 40 0 7 950 1276 214 109 3 chr13 47952674 47952841 -72331471 + ORR1D1 LTR MaLR 1 182 -192 7 950 492 32 0 0 chr13 47952841 47952903 -72331409 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 950 1276 214 109 3 chr13 47952903 47952949 -72331363 + ORR1D1 LTR MaLR 183 228 -146 7 950 261 83 0 0 chr13 47952949 47952985 -72331327 + (CCTG)n Simple_repeat Simple_repeat 2 37 0 7 950 1276 214 109 3 chr13 47952985 47953108 -72331204 + ORR1D1 LTR MaLR 229 372 -2 7 950 446 222 146 59 chr13 47953135 47953355 -72330957 - MLT1B LTR MaLR -34 356 118 7 950 631 192 90 58 chr13 47953791 47953946 -72330366 + ORR1D1 LTR MaLR 22 181 -193 7 950 363 157 0 0 chr13 47953946 47954035 -72330277 + CT-rich Low_complexity Low_complexity 2 90 0 7 950 399 235 307 24 chr13 47954038 47954204 -72330108 + ORR1D1 LTR MaLR 172 384 0 7 950 1115 232 123 7 chr13 47954408 47954708 -72329604 + MLT1B LTR MaLR 1 335 -55 7 950 735 268 10 59 chr13 47954797 47954999 -72329313 - B3A SINE B2 -6 192 1 7 950 414 0 0 0 chr13 47955046 47955092 -72329220 + (TA)n Simple_repeat Simple_repeat 2 47 0 7 950 443 63 0 16 chr13 47955377 47955441 -72328871 + (GGGGA)n Simple_repeat Simple_repeat 5 67 0 7 950 210 358 109 7 chr13 47956397 47956535 -72327777 - MIRm SINE MIR -123 153 2 7 950 309 197 0 0 chr13 47956606 47956672 -72327640 + (CA)n Simple_repeat Simple_repeat 1 66 0 7 950 513 0 0 0 chr13 47956675 47956732 -72327580 + (GA)n Simple_repeat Simple_repeat 2 58 0 7 950 1826 144 116 40 chr13 47956890 47957291 -72327021 + Lx4B LINE L1 5792 6232 -826 7 950 304 191 24 0 chr13 47957370 47957454 -72326858 + CT-rich Low_complexity Low_complexity 1 86 0 7 950 548 91 11 0 chr13 47958101 47958189 -72326123 + (CTA)n Simple_repeat Simple_repeat 2 90 0 7 950 306 73 0 0 chr13 47959335 47959376 -72324936 + (T)n Simple_repeat Simple_repeat 1 41 0 7 950 6068 12 0 0 chr13 47959383 47960050 -72324262 - L1Md_T LINE L1 0 6582 5916 7 950 219 125 0 0 chr13 47960441 47960481 -72323831 + (TC)n Simple_repeat Simple_repeat 2 41 0 7 950 2011 115 16 3 chr13 47960966 47961281 -72323031 - ORR1A2 LTR MaLR -8 319 1 7 950 443 308 33 0 chr13 47962472 47962592 -72321720 + ID_B1 SINE B4 82 205 -19 7 950 270 0 0 0 chr13 47962596 47962626 -72321686 + (CAAT)n Simple_repeat Simple_repeat 3 32 0 7 950 180 191 42 21 chr13 47962839 47962887 -72321425 - MIRc SINE MIR -113 155 107 7 950 1020 276 87 46 chr13 47963062 47963431 -72320881 + MTD LTR MaLR 22 405 -14 7 950 344 294 27 9 chr13 47963545 47963655 -72320657 + PB1D10 SINE Alu 6 117 0 7 950 247 261 14 0 chr13 47963739 47963808 -72320504 + PB1D10 SINE Alu 47 116 -1 7 950 516 285 23 46 chr13 47964223 47964396 -72319916 + B4A SINE B4 124 292 0 7 950 586 193 19 4 chr13 47964471 47964742 -72319570 + (CA)n Simple_repeat Simple_repeat 1 275 0 7 950 909 98 29 6 chr13 47964762 47964937 -72319375 + (CA)n Simple_repeat Simple_repeat 2 180 0 7 950 191 331 91 37 chr13 47964982 47965280 -72319032 + L2a LINE L2 3108 3421 -5 7 950 546 16 0 0 chr13 47966200 47966263 -72318049 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 950 252 275 0 36 chr13 47966357 47966369 -72317943 - PB1D10 SINE Alu 0 117 108 7 950 246 128 0 0 chr13 47966369 47966408 -72317904 + (CTTG)n Simple_repeat Simple_repeat 1 39 0 7 950 252 277 6 35 chr13 47966408 47966494 -72317818 - PB1D10 SINE Alu -9 118 31 7 950 516 276 21 7 chr13 47967499 47967641 -72316671 + B1F2 SINE Alu 1 144 -5 7 950 358 196 22 0 chr13 47969474 47969566 -72314746 + CT-rich Low_complexity Low_complexity 2 95 0 8 950 563 94 0 10 chr13 47969581 47969678 -72314634 + (TG)n Simple_repeat Simple_repeat 2 97 0 8 950 608 301 156 44 chr13 47969702 47969952 -72314360 - B4A SINE B4 0 292 15 8 950 262 282 68 0 chr13 47970669 47970772 -72313540 - Tigger5 DNA MER2_type 0 2406 2297 8 950 499 353 26 0 chr13 47970791 47970981 -72313331 - Tigger5 DNA MER2_type -2200 206 12 8 118 434 352 106 27 chr13 47972276 47972606 -72311706 + LTR16D2 LTR ERVL 215 570 -2 8 951 379 283 44 172 chr13 47972631 47972904 -72311408 - RMER15 LTR ERVL -1 574 337 8 951 251 289 22 22 chr13 47973553 47973645 -72310667 + MLT1A1 LTR MaLR 305 396 -12 8 951 232 309 0 0 chr13 47974384 47974452 -72309860 + tRNA-Ala-GCY_ tRNA tRNA 4 71 -4 8 951 827 214 33 11 chr13 47975798 47975982 -72308330 + B3A SINE B2 1 188 -10 8 951 288 306 57 86 chr13 47976108 47976409 -72307903 + L1MB5 LINE L1 5653 5945 -229 8 951 246 148 0 0 chr13 47977370 47977424 -72306888 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 951 391 301 0 0 chr13 47979828 47979931 -72304381 + PB1D10 SINE Alu 6 108 -9 8 951 396 111 0 0 chr13 47979968 47980040 -72304272 + (TC)n Simple_repeat Simple_repeat 1 72 0 8 951 444 37 0 0 chr13 47980040 47980094 -72304218 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 951 1382 79 17 0 chr13 47980445 47980622 -72303690 + B2_Mm2 SINE B2 1 180 -15 8 951 198 0 0 0 chr13 47980622 47980644 -72303668 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 8 951 350 228 53 32 chr13 47980764 47980842 -72303470 + RMER30 DNA MER1_type 19 95 -107 8 951 519 45 0 0 chr13 47980842 47980908 -72303404 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 951 350 228 53 32 chr13 47980908 47980924 -72303388 + RMER30 DNA MER1_type 96 115 -87 8 951 270 0 0 0 chr13 47981971 47982001 -72302311 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 951 387 41 0 0 chr13 47982001 47982049 -72302263 + (GA)n Simple_repeat Simple_repeat 2 50 0 8 951 22 35 0 0 chr13 47982368 47982397 -72301915 + AT_rich Low_complexity Low_complexity 1 29 0 8 951 1579 262 78 16 chr13 47982937 47983363 -72300949 + Lx7 LINE L1 6933 7384 -312 8 951 267 31 0 0 chr13 47983378 47983410 -72300902 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 951 378 0 0 0 chr13 47983410 47983451 -72300861 + (GA)n Simple_repeat Simple_repeat 1 42 0 8 951 2253 48 22 0 chr13 47983724 47983994 -72300318 - L1_Mus1 LINE L1 -141 6426 6151 8 951 508 302 25 0 chr13 47984043 47984205 -72300107 - ID_B1 SINE B4 -57 167 2 8 951 5271 140 17 33 chr13 47984555 47985505 -72298807 - L1_Mur2 LINE L1 -468 5409 4475 8 951 2566 188 13 0 chr13 47985505 47985979 -72298333 + Lx5 LINE L1 6571 7050 0 8 951 689 201 142 41 chr13 47986430 47986627 -72297685 + ID_B1 SINE B4 1 217 -7 8 951 308 356 46 16 chr13 47987221 47987415 -72296897 - HERV16-int LTR ERVL -2729 2267 2068 8 951 728 359 42 19 chr13 47988046 47988518 -72295794 - HERV16-int LTR ERVL -3706 1290 808 8 951 344 325 38 88 chr13 47989397 47989660 -72294652 + LTR16B LTR ERVL 116 365 -98 8 951 563 338 43 33 chr13 47989708 47990054 -72294258 - LTR16A LTR ERVL -97 359 1 8 951 211 378 27 0 chr13 47990425 47990536 -72293776 - MIRc SINE MIR -153 115 2 8 951 351 0 0 0 chr13 47990860 47990899 -72293413 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 951 231 133 0 0 chr13 47991223 47991268 -72293044 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 8 951 427 340 16 16 chr13 47991667 47991861 -72292451 - Lx8 LINE L1 -147 7326 7133 8 951 24 0 0 0 chr13 47991903 47991927 -72292385 + GC_rich Low_complexity Low_complexity 1 24 0 8 951 24 32 0 0 chr13 47992311 47992342 -72291970 + AT_rich Low_complexity Low_complexity 1 31 0 8 951 480 214 150 8 chr13 47992581 47992708 -72291604 - B1_Mur2 SINE Alu -2 147 3 8 951 261 272 91 58 chr13 47992950 47993071 -72291241 - MIRb SINE MIR -36 232 108 8 951 465 19 0 0 chr13 47993439 47993493 -72290819 + (A)n Simple_repeat Simple_repeat 1 54 0 8 951 240 353 94 39 chr13 47993559 47993739 -72290573 + LTR16B1 LTR ERVL 177 366 -114 8 951 276 395 69 26 chr13 47994283 47994629 -72289683 + HERV16-int LTR ERVL 2527 2887 -2109 8 951 2332 266 94 58 chr13 47994696 47996252 -72288060 - L1_Rod LINE L1 -1010 4870 3121 8 951 194 0 0 37 chr13 47996424 47996451 -72287861 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 8 951 355 271 94 24 chr13 47996482 47996652 -72287660 - Lx8 LINE L1 -3 7470 7289 8 951 459 293 17 62 chr13 47996752 47997040 -72287272 - RLTR15 LTR ERVK -84 275 1 8 951 662 260 82 11 chr13 47997290 47997473 -72286839 - B3A SINE B2 0 198 3 8 951 203 233 0 0 chr13 47997776 47997819 -72286493 + C-rich Low_complexity Low_complexity 1 43 0 8 951 824 267 68 90 chr13 47998681 47999047 -72285265 - MTE2b LTR MaLR -19 360 3 8 951 184 343 145 14 chr13 47999110 47999255 -72285057 + MIRb SINE MIR 91 254 -14 8 951 223 287 45 11 chr13 47999657 47999745 -72284567 + PB1D9 SINE Alu 30 120 0 8 951 747 154 0 0 chr13 48000654 48000790 -72283522 + CT-rich Low_complexity Low_complexity 3 138 0 1 951 351 121 0 0 chr13 48000857 48000915 -72283397 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 951 269 278 0 100 chr13 48000916 48000996 -72283316 - ID4 SINE ID -11 72 1 3 951 597 14 0 0 chr13 48000999 48001069 -72283243 + (TC)n Simple_repeat Simple_repeat 2 71 0 4 951 301 314 19 10 chr13 48001364 48001467 -72282845 - PB1D10 SINE Alu -1 116 13 5 951 349 233 12 0 chr13 48003609 48003695 -72280617 + B3A SINE B2 1 87 -111 6 951 342 0 0 0 chr13 48003737 48003775 -72280537 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 951 965 209 9 0 chr13 48003948 48004173 -72280139 - RCHARR1 DNA MER1_type 0 974 748 8 951 1191 230 186 43 chr13 48004172 48004581 -72279731 - RCHARR1 DNA MER1_type -507 467 1 8 951 717 293 82 0 chr13 48006569 48006801 -72277511 - MER2 DNA MER2_type -94 251 1 9 951 582 274 0 46 chr13 48006898 48007051 -72277261 - B1F1 SINE Alu 0 149 4 1 951 244 291 0 12 chr13 48007053 48007133 -72277179 - RMER1C Other Other -4 1338 1260 1 951 3302 309 78 63 chr13 48007074 48008259 -72276053 - Lx8 LINE L1 -2 7471 6176 1 951 441 0 0 0 chr13 48008259 48008308 -72276004 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 951 312 27 0 0 chr13 48008308 48008344 -72275968 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 951 3302 299 41 57 chr13 48008344 48009283 -72275029 - Lx8 LINE L1 -1298 6175 5308 1 951 1740 246 136 15 chr13 48009348 48009964 -72274348 - Lx8 LINE L1 -1086 4794 4104 1 951 1406 170 56 32 chr13 48010273 48010558 -72273754 - Lx6 LINE L1 0 7460 7169 1 951 186 103 0 0 chr13 48010606 48010635 -72273677 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 1 951 290 290 113 9 chr13 48010642 48010758 -72273554 - B1F SINE Alu -21 128 1 1 951 420 318 81 5 chr13 48010767 48010988 -72273324 + MER45B DNA Tip100 577 814 -226 1 951 968 149 191 0 chr13 48011235 48011423 -72272889 - URR1B DNA MER1_type -1 224 1 1 951 537 238 38 15 chr13 48011653 48011785 -72272527 + B1F SINE Alu 15 149 0 2 951 28 0 0 0 chr13 48011868 48011896 -72272416 + AT_rich Low_complexity Low_complexity 1 28 0 2 951 339 238 44 4 chr13 48012844 48012943 -72271369 + B3A SINE B2 1 99 -117 2 951 850 252 62 81 chr13 48014708 48015076 -72269236 + ORR1E LTR MaLR 1 379 0 2 951 697 215 112 58 chr13 48015273 48015321 -72268991 + L1MA4 LINE L1 5597 5647 -653 2 951 324 48 0 0 chr13 48015321 48015363 -72268949 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 951 697 215 112 58 chr13 48015363 48015591 -72268721 + L1MA4 LINE L1 5648 5888 -412 2 951 646 304 117 62 chr13 48017692 48018888 -72265424 - L1MB8 LINE L1 -11 6167 4899 2 951 335 340 91 25 chr13 48018889 48019130 -72265182 - MLT1E LTR MaLR -394 259 3 2 951 423 0 0 0 chr13 48019521 48019568 -72264744 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 951 30598 78 29 8 chr13 48019935 48021837 -72262475 - L1_Mus1 LINE L1 0 6567 4731 2 951 7009 15 0 0 chr13 48021837 48022615 -72261697 - L1Md_A LINE L1 0 6582 5805 3 951 30598 115 59 27 chr13 48022615 48027042 -72257270 - L1_Mus1 LINE L1 -1153 4730 99 2 951 296 339 40 80 chr13 48027197 48027473 -72256839 + L1MCb LINE L1 725 989 -5056 3 951 449 221 82 55 chr13 48028862 48029044 -72255268 - RLTR23 LTR ERV1 0 430 244 3 951 283 292 0 0 chr13 48029760 48029832 -72254480 - ID4_ SINE ID -4 79 8 3 951 542 296 12 36 chr13 48030024 48030165 -72254147 - RSINE1 SINE B4 -2 163 26 3 951 1945 179 71 5 chr13 48030165 48030547 -72253765 + MTB_Mm LTR MaLR 1 407 0 3 951 542 296 12 36 chr13 48030547 48030570 -72253742 - RSINE1 SINE B4 -140 25 3 3 951 3071 129 124 10 chr13 48030831 48031346 -72252966 - RMER15 LTR ERVL -1 574 1 3 951 727 310 16 32 chr13 48032140 48032330 -72251982 + B4A SINE B4 84 270 -22 3 951 366 125 14 0 chr13 48032570 48032642 -72251670 + B2_Mm2 SINE B2 123 195 0 3 951 276 100 0 0 chr13 48032642 48032682 -72251630 + (GA)n Simple_repeat Simple_repeat 1 40 0 3 951 1182 55 7 0 chr13 48032823 48032969 -72251343 + B1_Mus1 SINE Alu 2 148 0 4 951 310 0 43 22 chr13 48032978 48033024 -72251288 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 4 951 2443 175 48 12 chr13 48033242 48033677 -72250635 - RLTR11A2 LTR ERVK 0 527 74 4 951 531 0 0 0 chr13 48033677 48033736 -72250576 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 951 2443 175 48 12 chr13 48033736 48033804 -72250508 - RLTR11A2 LTR ERVK -454 73 6 4 951 838 130 93 0 chr13 48033830 48033991 -72250321 + RMER4B LTR ERVK 1 176 -409 4 951 197 52 235 0 chr13 48034124 48034260 -72250052 + (GACTG)n Simple_repeat Simple_repeat 1 168 0 4 951 476 168 50 214 chr13 48034315 48034543 -72249769 + RMER4B LTR ERVK 343 588 -23 4 951 351 44 0 0 chr13 48034740 48034785 -72249527 + (TTG)n Simple_repeat Simple_repeat 2 46 0 4 951 670 248 21 7 chr13 48034785 48034927 -72249385 - B1_Mur2 SINE Alu -5 144 1 4 951 397 266 94 0 chr13 48035389 48035506 -72248806 + B1_Mur1 SINE Alu 2 130 -19 4 951 441 81 0 0 chr13 48035508 48035570 -72248742 + (GA)n Simple_repeat Simple_repeat 1 62 0 4 951 616 309 5 0 chr13 48035729 48035917 -72248395 + Lx7 LINE L1 7130 7318 -378 5 951 210 37 0 0 chr13 48036056 48036083 -72248229 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 951 220 122 24 0 chr13 48036090 48036131 -72248181 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 951 1063 211 200 37 chr13 48036131 48036566 -72247746 + RMER1A Other Other 587 1029 -1 5 951 491 310 26 20 chr13 48036682 48036865 -72247447 + B3A SINE B2 27 213 -3 5 951 836 69 9 0 chr13 48037400 48037516 -72246796 + (TCTCCC)n Simple_repeat Simple_repeat 5 121 0 5 951 234 0 0 0 chr13 48037516 48037541 -72246771 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 951 481 274 62 17 chr13 48038293 48038617 -72245695 + Lx7 LINE L1 7046 7418 -278 5 951 508 101 0 22 chr13 48039669 48039760 -72244552 + (GGGA)n Simple_repeat Simple_repeat 1 89 0 5 951 376 184 16 88 chr13 48039760 48039924 -72244388 - ORR1D1 LTR MaLR -164 215 28 5 951 330 263 81 0 chr13 48039977 48040076 -72244236 - MTEa LTR MaLR -272 107 1 6 951 361 340 120 66 chr13 48040145 48040175 -72244137 - MLT2B3 LTR ERVL -26 528 499 6 951 1495 170 165 30 chr13 48040175 48040503 -72243809 - ORR1D1 LTR MaLR -2 372 1 6 951 361 340 120 66 chr13 48040503 48040973 -72243339 - MLT2B3 LTR ERVL -56 498 1 6 951 341 188 0 12 chr13 48041573 48041654 -72242658 + CT-rich Low_complexity Low_complexity 4 83 0 6 951 28 0 0 0 chr13 48042752 48042780 -72241532 + AT_rich Low_complexity Low_complexity 1 28 0 6 951 736 258 64 34 chr13 48042835 48043100 -72241212 + B4A SINE B4 1 273 -19 6 951 223 312 13 0 chr13 48043193 48043270 -72241042 + ID4 SINE ID 2 79 -4 6 951 26 30 0 0 chr13 48044265 48044298 -72240014 + AT_rich Low_complexity Low_complexity 1 33 0 6 951 216 312 83 0 chr13 48044806 48044915 -72239397 - MIRc SINE MIR -61 207 90 6 951 326 344 24 81 chr13 48044938 48045147 -72239165 - MER58B DNA MER1_type -9 332 136 6 951 234 0 0 0 chr13 48045178 48045204 -72239108 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 951 354 273 88 25 chr13 48045207 48045333 -72238979 - B3A SINE B2 -34 182 43 7 951 334 298 90 8 chr13 48045408 48045530 -72238782 + B1F SINE Alu 18 149 0 7 951 216 0 0 0 chr13 48045601 48045625 -72238687 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 951 297 0 0 0 chr13 48046245 48046278 -72238034 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 951 360 0 0 0 chr13 48046278 48046317 -72237995 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 951 927 95 27 23 chr13 48047383 48047683 -72236629 + (TAGA)n Simple_repeat Simple_repeat 1 300 0 7 951 324 103 0 0 chr13 48047757 48047815 -72236497 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 951 245 282 192 83 chr13 48047845 48048038 -72236274 - B4 SINE B4 -29 263 50 7 951 396 0 0 0 chr13 48048656 48048700 -72235612 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 951 1241 57 103 43 chr13 48048801 48048985 -72235327 + B2_Mm2 SINE B2 1 195 0 8 951 305 346 30 30 chr13 48050637 48050804 -72233508 - MER5B DNA MER1_type -9 169 3 8 951 1495 261 142 4 chr13 48052149 48052649 -72231663 - Lx8 LINE L1 0 7473 6905 8 951 337 269 35 88 chr13 48052808 48052922 -72231390 - PB1D9 SINE Alu -11 109 2 8 951 341 290 7 101 chr13 48053741 48053879 -72230433 + ID_B1 SINE B4 47 171 -53 8 951 487 246 9 9 chr13 48053790 48053905 -72230407 + PB1D7 SINE Alu 6 120 0 8 951 629 317 70 10 chr13 48053951 48054152 -72230160 + ID_B1 SINE B4 1 213 -11 8 951 216 158 0 0 chr13 48054152 48054190 -72230122 + (CAT)n Simple_repeat Simple_repeat 3 40 0 8 951 253 262 0 0 chr13 48054191 48054252 -72230060 + (CCA)n Simple_repeat Simple_repeat 3 63 0 8 951 256 139 74 25 chr13 48054357 48054438 -72229874 + (TTATA)n Simple_repeat Simple_repeat 2 86 0 8 951 498 304 63 50 chr13 48055244 48055483 -72228829 + B4A SINE B4 47 288 -4 9 951 306 0 0 0 chr13 48055561 48055595 -72228717 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 951 372 43 0 0 chr13 48056444 48056490 -72227822 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 951 579 301 21 48 chr13 48056536 48056826 -72227486 - B4A SINE B4 -9 283 2 9 951 392 216 80 0 chr13 48056828 48056916 -72227396 - B4A SINE B4 -61 231 137 9 951 285 367 0 8 chr13 48057391 48057520 -72226792 + MER104 DNA Tc2 49 176 -5 9 951 233 261 11 0 chr13 48057815 48057903 -72226409 + GA-rich Low_complexity Low_complexity 4 92 0 9 951 997 240 5 14 chr13 48058501 48058721 -72225591 + ID_B1 SINE B4 1 218 -6 9 951 486 279 86 98 chr13 48060019 48060316 -72223996 - B4A SINE B4 -1 291 1 9 951 395 258 96 75 chr13 48061928 48062167 -72222145 + ORR1E LTR MaLR 65 308 -51 9 951 377 252 9 29 chr13 48062169 48062494 -72221818 + CT-rich Low_complexity Low_complexity 1 318 0 1 951 515 286 11 0 chr13 48062538 48062716 -72221596 + C-rich Low_complexity Low_complexity 1 180 0 1 951 331 296 0 0 chr13 48062897 48062985 -72221327 + 5S rRNA rRNA 1 88 -33 1 951 377 234 35 35 chr13 48064313 48064428 -72219884 - PB1D10 SINE Alu 0 117 3 1 951 21 36 0 0 chr13 48065067 48065095 -72219217 + AT_rich Low_complexity Low_complexity 1 28 0 1 951 203 255 0 0 chr13 48065965 48066012 -72218300 + MIRc SINE MIR 157 203 -65 1 951 1519 212 72 8 chr13 48066694 48067055 -72217257 - ORR1B1 LTR MaLR -8 386 3 1 951 425 213 53 10 chr13 48067707 48067836 -72216476 + B3 SINE B2 57 198 0 1 951 450 0 0 0 chr13 48067865 48067915 -72216397 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 951 341 307 43 7 chr13 48068324 48068465 -72215847 + B1F SINE Alu 1 146 -3 1 951 189 0 0 0 chr13 48068567 48068588 -72215724 + (T)n Simple_repeat Simple_repeat 1 21 0 1 951 547 275 131 68 chr13 48070545 48070896 -72213416 + MTEb LTR MaLR 7 379 0 1 951 3796 116 40 2 chr13 48071671 48072226 -72212086 + Lx4A LINE L1 6481 7056 -2 1 951 202 0 91 0 chr13 48072226 48072259 -72212053 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1 951 1163 49 0 20 chr13 48073769 48073905 -72210407 + B1_Mus2 SINE Alu 1 136 -11 1 951 261 0 0 0 chr13 48073905 48073934 -72210378 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 951 509 281 16 0 chr13 48074286 48074407 -72209905 + RSINE1 SINE B4 16 138 -27 1 951 322 297 62 8 chr13 48074812 48074941 -72209371 + MTEb LTR MaLR 4 139 -220 1 951 356 282 56 8 chr13 48074997 48075122 -72209190 + MTEb LTR MaLR 249 379 0 1 951 216 67 0 0 chr13 48075128 48075158 -72209154 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 1 951 540 0 0 0 chr13 48075218 48075278 -72209034 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 951 246 208 68 27 chr13 48075666 48075740 -72208572 - MTEb LTR MaLR -7 372 296 1 951 374 299 97 43 chr13 48076208 48076393 -72207919 + B4A SINE B4 14 208 -84 1 951 243 0 0 0 chr13 48076466 48076493 -72207819 + (TC)n Simple_repeat Simple_repeat 2 28 0 1 951 324 0 0 0 chr13 48078207 48078243 -72206069 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 951 706 231 0 112 chr13 48078312 48078517 -72205795 + B3A SINE B2 1 182 -16 1 951 25 31 0 0 chr13 48078540 48078572 -72205740 + AT_rich Low_complexity Low_complexity 1 32 0 1 951 685 299 39 21 chr13 48080838 48081122 -72203190 - B4 SINE B4 0 292 4 1 951 703 300 33 37 chr13 48081279 48081549 -72202763 + B4A SINE B4 11 279 -13 1 951 359 250 11 0 chr13 48082153 48082245 -72202067 - B1F SINE Alu 0 149 57 1 951 2617 139 106 19 chr13 48082892 48083238 -72201074 + RLTR28 LTR ERVL 1 380 -144 1 951 783 102 0 0 chr13 48083238 48083375 -72200937 + (TC)n Simple_repeat Simple_repeat 1 137 0 1 951 2617 139 106 19 chr13 48083375 48083510 -72200802 + RLTR28 LTR ERVL 381 523 -1 1 951 1966 178 21 51 chr13 48083532 48083928 -72200384 - MTC LTR MaLR -2 419 34 1 951 1415 125 46 0 chr13 48083928 48084144 -72200168 - URR1A DNA MER1_type 0 226 1 1 951 1966 178 21 51 chr13 48084144 48084179 -72200133 - MTC LTR MaLR -388 33 1 1 951 885 179 29 4 chr13 48084763 48085023 -72199289 - Lx5 LINE L1 -616 6434 6135 1 951 2346 69 0 0 chr13 48085052 48085371 -72198941 + ORR1A2 LTR MaLR 1 319 -8 1 951 5126 151 85 51 chr13 48085375 48086552 -72197760 + ORR1A2-int LTR MaLR 1 1217 -746 1 951 256 79 0 0 chr13 48086547 48086585 -72197727 + ORR1A2 LTR MaLR 281 318 -8 1 951 2284 205 7 5 chr13 48086585 48087012 -72197300 + Lx5 LINE L1 6479 6906 -144 1 951 518 285 6 31 chr13 48087283 48087446 -72196866 + RSINE1 SINE B4 3 161 -4 1 951 295 291 81 9 chr13 48087745 48087856 -72196456 + MER5A DNA MER1_type 21 139 -50 1 951 245 322 22 0 chr13 48088656 48088746 -72195566 + MER5A1 DNA MER1_type 71 162 -4 1 951 264 254 96 44 chr13 48090414 48090550 -72193762 - L1M3 LINE L1 -1725 4415 4273 1 951 378 0 0 0 chr13 48090557 48090599 -72193713 + (TTG)n Simple_repeat Simple_repeat 1 42 0 1 951 189 241 0 0 chr13 48090599 48090653 -72193659 + (ATG)n Simple_repeat Simple_repeat 1 54 0 1 951 964 271 153 40 chr13 48090776 48091526 -72192786 - L1M3 LINE L1 -2057 4083 3249 1 951 615 144 0 0 chr13 48092256 48092367 -72191945 + (TG)n Simple_repeat Simple_repeat 1 111 0 1 951 591 212 143 18 chr13 48092457 48092625 -72191687 + B3A SINE B2 1 189 -9 1 951 567 230 35 28 chr13 48092630 48092773 -72191539 + B1_Mur2 SINE Alu 1 144 -5 1 951 805 271 71 65 chr13 48093693 48094060 -72190252 - MTEa LTR MaLR -10 369 1 1 951 333 217 14 14 chr13 48094522 48094667 -72189645 + (TCTA)n Simple_repeat Simple_repeat 4 148 0 1 951 195 129 0 0 chr13 48095286 48095317 -72188995 + (T)n Simple_repeat Simple_repeat 1 31 0 1 951 290 217 96 0 chr13 48095591 48095674 -72188638 + ORR1E LTR MaLR 266 356 -3 1 951 306 50 0 0 chr13 48095735 48095775 -72188537 + (CCCCAA)n Simple_repeat Simple_repeat 1 40 0 1 951 379 238 77 29 chr13 48096354 48096458 -72187854 + PB1D10 SINE Alu 1 109 -8 1 951 216 313 8 25 chr13 48096958 48097076 -72187236 + (CA)n Simple_repeat Simple_repeat 1 116 0 1 951 432 0 0 0 chr13 48097650 48097698 -72186614 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 951 347 248 271 13 chr13 48097707 48097936 -72186376 - B4A SINE B4 -2 290 3 1 951 1247 84 6 0 chr13 48098062 48098240 -72186072 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 951 4214 258 82 26 chr13 48099081 48100365 -72183947 - Lx7 LINE L1 -538 7158 5804 1 951 1978 271 63 42 chr13 48100364 48101569 -72182743 + Lx7 LINE L1 4655 5818 -62 1 951 342 0 0 0 chr13 48101937 48101975 -72182337 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 1 951 597 123 0 0 chr13 48103078 48103184 -72181128 + (CTTG)n Simple_repeat Simple_repeat 2 107 0 1 118 1295 254 18 9 chr13 48103187 48103521 -72180791 - MTEb LTR MaLR -26 353 17 1 952 22 0 0 0 chr13 48103643 48103665 -72180647 + AT_rich Low_complexity Low_complexity 1 22 0 1 952 216 0 0 0 chr13 48105073 48105097 -72179215 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1 952 532 187 28 18 chr13 48105137 48105246 -72179066 + PB1D10 SINE Alu 1 110 -7 1 952 467 60 0 15 chr13 48105845 48105913 -72178399 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 952 453 264 14 7 chr13 48106033 48106174 -72178138 - B1F2 SINE Alu -6 143 2 1 952 420 242 0 111 chr13 48106276 48106420 -72177892 + RSINE1 SINE B4 6 133 -32 1 952 216 0 0 0 chr13 48106421 48106445 -72177867 + (TC)n Simple_repeat Simple_repeat 1 24 0 1 952 414 0 0 0 chr13 48106445 48106490 -72177822 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 952 1513 259 72 64 chr13 48106592 48107094 -72177218 - Lx6 LINE L1 -10 7450 6945 1 952 469 274 46 35 chr13 48107105 48107279 -72177033 - MTEa LTR MaLR -199 180 5 1 952 381 70 0 0 chr13 48108390 48108447 -72175865 + (A)n Simple_repeat Simple_repeat 1 57 0 1 952 312 298 29 0 chr13 48109338 48109442 -72174870 - PB1D10 SINE Alu -1 116 10 1 952 782 244 91 5 chr13 48109664 48109862 -72174450 + B3 SINE B2 1 215 -1 1 952 985 60 37 0 chr13 48110073 48110207 -72174105 + B2_Mm2 SINE B2 1 139 -56 1 952 294 95 0 0 chr13 48110609 48110651 -72173661 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 952 250 160 39 20 chr13 48110663 48110714 -72173598 - B1F1 SINE Alu -3 146 95 1 952 924 233 9 28 chr13 48110767 48110983 -72173329 - B3 SINE B2 -3 213 2 1 952 353 310 26 52 chr13 48112411 48112564 -72171748 + B4A SINE B4 1 149 -143 1 952 369 0 0 0 chr13 48112603 48112644 -72171668 + (A)n Simple_repeat Simple_repeat 1 41 0 1 952 608 281 21 36 chr13 48113570 48113762 -72170550 + B3A SINE B2 2 190 -8 1 952 604 280 19 8 chr13 48114112 48114321 -72169991 + B3A SINE B2 4 210 -6 1 952 311 323 139 0 chr13 48116186 48116387 -72167925 - MIRc SINE MIR -23 245 17 1 952 568 210 24 54 chr13 48116525 48116691 -72167621 + RMER15 LTR ERVL 1 161 -414 1 952 1234 68 11 6 chr13 48117122 48117300 -72167012 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 1 952 271 143 35 35 chr13 48117319 48117377 -72166935 + MTEa LTR MaLR 314 371 -8 1 952 2116 106 26 67 chr13 48117468 48117811 -72166501 + ORR1A4 LTR MaLR 1 329 0 1 952 225 0 0 0 chr13 48118368 48118393 -72165919 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 952 360 0 0 0 chr13 48118393 48118432 -72165880 + (GA)n Simple_repeat Simple_repeat 2 41 0 1 952 276 40 19 39 chr13 48118602 48118654 -72165658 + (TTTTG)n Simple_repeat Simple_repeat 5 55 0 1 952 819 245 117 26 chr13 48120532 48120796 -72163516 + B4A SINE B4 3 290 -2 1 952 226 233 27 14 chr13 48120818 48120892 -72163420 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 952 501 292 77 96 chr13 48121390 48121740 -72162572 - ORR1E LTR MaLR 0 379 1 1 952 342 98 0 0 chr13 48121790 48121841 -72162471 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 952 236 233 14 0 chr13 48122001 48122074 -72162238 + GA-rich Low_complexity Low_complexity 4 77 0 1 952 189 0 0 0 chr13 48122561 48122582 -72161730 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 952 192 77 0 0 chr13 48123599 48123625 -72160687 + (A)n Simple_repeat Simple_repeat 1 26 0 1 952 252 0 0 0 chr13 48124607 48124635 -72159677 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 952 429 156 0 0 chr13 48124715 48124792 -72159520 + T-rich Low_complexity Low_complexity 1 77 0 1 952 610 309 29 29 chr13 48124799 48125139 -72159173 - L1MA4 LINE L1 -368 5932 5593 1 952 402 21 0 0 chr13 48125398 48125445 -72158867 + (TTG)n Simple_repeat Simple_repeat 2 48 0 1 952 202 269 0 15 chr13 48128040 48128108 -72156204 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 952 743 314 27 16 chr13 48128113 48128369 -72155943 - B4 SINE B4 -2 290 32 2 952 1298 171 14 5 chr13 48128561 48128784 -72155528 - URR1B DNA MER1_type 0 225 1 2 952 2784 116 15 19 chr13 48128792 48129265 -72155047 + RLTR31B_Mm LTR ERVK 1 471 -86 2 952 362 269 10 31 chr13 48129281 48129377 -72154935 - URR1B DNA MER1_type -131 94 1 2 952 458 290 41 47 chr13 48129867 48130037 -72154275 - B4 SINE B4 0 292 124 2 952 21 57 0 0 chr13 48130923 48130958 -72153354 + AT_rich Low_complexity Low_complexity 1 35 0 2 952 302 331 74 8 chr13 48130985 48131107 -72153205 - RSINE1 SINE B4 -34 131 2 2 952 690 349 29 23 chr13 48131367 48131716 -72152596 - MLT1A1 LTR MaLR -4 404 54 2 952 1087 226 92 0 chr13 48131761 48132022 -72152290 + ORR1C2 LTR MaLR 100 384 0 2 952 2082 172 32 55 chr13 48132668 48133142 -72151170 + RLTR20C LTR ERVK 1 463 -71 2 952 368 252 50 56 chr13 48133356 48133516 -72150796 + MYSERV16_I-int LTR ERVK 144 302 -2540 2 952 686 227 29 136 chr13 48134057 48134240 -72150072 + MYSERV16_I-int LTR ERVK 1112 1269 -1573 2 952 396 0 0 0 chr13 48134240 48134284 -72150028 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 952 4237 187 83 36 chr13 48134284 48134529 -72149783 + MYSERV16_I-int LTR ERVK 21 290 -2036 2 952 1179 68 0 0 chr13 48134529 48134676 -72149636 + B1_Mus2 SINE Alu 1 147 0 2 952 4237 187 83 36 chr13 48134676 48135364 -72148948 + MYSERV16_I-int LTR ERVK 291 998 -1328 2 952 1190 61 0 7 chr13 48135373 48135521 -72148791 - B1_Mm SINE Alu 0 147 1 2 952 1614 82 21 0 chr13 48135522 48135765 -72148547 + MYSERV16_I-int LTR ERVK 1078 1325 -1001 2 952 1212 73 0 0 chr13 48136945 48137109 -72147203 + (GGGAGA)n Simple_repeat Simple_repeat 3 166 0 2 952 21 36 0 0 chr13 48137418 48137446 -72146866 + AT_rich Low_complexity Low_complexity 1 28 0 2 952 21 0 0 0 chr13 48137481 48137502 -72146810 + AT_rich Low_complexity Low_complexity 1 21 0 2 952 223 254 34 0 chr13 48138906 48138965 -72145347 + CT-rich Low_complexity Low_complexity 4 64 0 2 952 206 316 68 8 chr13 48139590 48139708 -72144604 - MER5A DNA MER1_type -8 181 57 2 952 406 250 0 94 chr13 48140707 48140835 -72143477 + PB1D10 SINE Alu 2 117 0 2 952 628 241 76 15 chr13 48144598 48144796 -72139516 - RCHARR1 DNA MER1_type -4 970 761 2 952 512 162 94 0 chr13 48144794 48144911 -72139401 - RCHARR1 DNA MER1_type -533 441 314 2 952 306 0 0 0 chr13 48144916 48144950 -72139362 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 952 596 167 0 2 chr13 48144962 48145070 -72139242 - B1_Mur3 SINE Alu -43 107 2 2 952 458 302 8 0 chr13 48145087 48145213 -72139099 - RCHARR1 DNA MER1_type -658 316 190 2 952 289 269 31 41 chr13 48145238 48145335 -72138977 + RCHARR1 DNA MER1_type 189 284 -690 2 952 467 307 35 45 chr13 48145283 48145481 -72138831 - RCHARR1 DNA MER1_type -778 196 1 2 952 208 121 0 0 chr13 48145644 48145677 -72138635 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 952 573 52 0 0 chr13 48145721 48145798 -72138514 + (GA)n Simple_repeat Simple_repeat 2 78 0 2 952 234 241 0 0 chr13 48146126 48146180 -72138132 - MLT1A LTR MaLR 0 374 321 2 952 183 42 0 0 chr13 48146354 48146378 -72137934 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 952 364 293 84 13 chr13 48146563 48146788 -72137524 - L1MA4 LINE L1 -391 5909 5669 2 952 340 202 14 84 chr13 48147448 48147547 -72136765 + B1F SINE Alu 23 113 -14 2 952 432 0 0 0 chr13 48148150 48148198 -72136114 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 952 497 277 22 7 chr13 48148212 48148350 -72135962 + B1F SINE Alu 2 141 -8 2 952 304 269 51 32 chr13 48148387 48148530 -72135782 + L1M5 LINE L1 5369 5513 -820 2 952 22 0 0 0 chr13 48149254 48149276 -72135036 + AT_rich Low_complexity Low_complexity 1 22 0 2 952 405 0 0 0 chr13 48150553 48150598 -72133714 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 952 753 292 92 25 chr13 48150700 48151026 -72133286 - ORR1E LTR MaLR -4 355 8 2 952 346 273 84 77 chr13 48151151 48151306 -72133006 - RSINE1 SINE B4 -8 157 2 2 952 611 167 0 10 chr13 48153260 48153363 -72130949 - B1_Mus2 SINE Alu -16 131 30 2 952 725 309 39 18 chr13 48153490 48153773 -72130539 + B4 SINE B4 4 292 0 2 952 3029 175 35 55 chr13 48153989 48154612 -72129700 - RMER19C LTR ERVK 0 611 1 2 952 216 0 0 0 chr13 48154614 48154638 -72129674 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 952 281 326 27 94 chr13 48154696 48154845 -72129467 - B4A SINE B4 -152 140 2 2 952 1872 134 78 11 chr13 48155170 48155518 -72128794 + MTC LTR MaLR 51 421 0 2 952 466 18 0 0 chr13 48155956 48156012 -72128300 - L1Md_T LINE L1 -12 6570 6515 2 952 853 266 70 7 chr13 48156421 48156749 -72127563 + ORR1E LTR MaLR 10 379 0 2 952 789 76 0 0 chr13 48157101 48157219 -72127093 + (TG)n Simple_repeat Simple_repeat 1 118 0 2 952 582 267 53 0 chr13 48157233 48157364 -72126948 - B3 SINE B2 -77 139 2 2 952 510 225 76 38 chr13 48157735 48157855 -72126457 + B3 SINE B2 49 163 -53 2 952 534 31 0 0 chr13 48157855 48157919 -72126393 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 952 510 225 76 38 chr13 48157919 48157955 -72126357 + B3 SINE B2 164 210 -6 2 952 583 258 107 16 chr13 48158479 48158731 -72125581 - B4A SINE B4 -17 275 1 2 952 799 279 211 30 chr13 48159236 48159739 -72124573 + Charlie13a DNA Charlie 48 641 -873 2 952 210 301 82 0 chr13 48159755 48159828 -72124484 + PB1D7 SINE Alu 34 112 -8 2 952 229 355 75 0 chr13 48160147 48160240 -72124072 + Tigger5 DNA MER2_type 127 226 -2180 2 952 468 0 0 0 chr13 48160241 48160293 -72124019 + (TC)n Simple_repeat Simple_repeat 1 52 0 2 952 252 86 0 0 chr13 48160293 48160328 -72123984 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 952 723 216 0 0 chr13 48160447 48160586 -72123726 + B3A SINE B2 9 147 -51 2 952 405 0 0 0 chr13 48160590 48160635 -72123677 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 952 686 236 0 4 chr13 48162477 48162705 -72121607 + (TA)n Simple_repeat Simple_repeat 1 227 0 2 952 384 55 108 21 chr13 48164391 48164484 -72119828 + (TATATG)n Simple_repeat Simple_repeat 4 104 0 2 952 390 389 34 13 chr13 48164484 48164721 -72119591 - MLT1G LTR MaLR -28 563 322 2 952 296 312 43 111 chr13 48165152 48165517 -72118795 - MLT1G LTR MaLR -261 308 4 2 952 191 32 0 61 chr13 48165705 48165738 -72118574 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 2 952 216 97 0 0 chr13 48166094 48166125 -72118187 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 952 680 222 200 22 chr13 48166132 48166312 -72118000 - B3 SINE B2 0 216 5 2 952 2719 158 64 18 chr13 48166919 48167422 -72116890 - RLTR11A LTR ERVK -1 527 2 2 952 315 0 0 0 chr13 48167989 48168024 -72116288 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 952 428 277 29 0 chr13 48168103 48168240 -72116072 + MER57A-int LTR ERV1 5810 5950 -237 2 952 712 318 34 31 chr13 48168324 48168716 -72115596 + Lx7 LINE L1 5457 5843 -4 2 952 2067 153 3 3 chr13 48169472 48169799 -72114513 - ORR1A2 LTR MaLR 0 327 1 2 952 489 181 25 33 chr13 48170231 48170484 -72113828 + CT-rich Low_complexity Low_complexity 1 250 0 2 952 252 171 56 28 chr13 48170498 48170570 -72113742 + (TATAG)n Simple_repeat Simple_repeat 4 77 0 2 952 216 273 0 0 chr13 48170655 48170721 -72113591 + A-rich Low_complexity Low_complexity 1 66 0 2 952 229 333 130 10 chr13 48171250 48171350 -72112962 + ID_B1 SINE B4 82 193 -31 2 952 1697 239 94 16 chr13 48171822 48172388 -72111924 - RCHARR1 DNA MER1_type 0 974 365 2 952 329 279 101 18 chr13 48172414 48172582 -72111730 - RCHARR1 DNA MER1_type -761 213 32 2 952 635 248 0 12 chr13 48174006 48174266 -72110046 + C-rich Low_complexity Low_complexity 1 256 0 2 952 625 86 55 77 chr13 48174251 48174580 -72109732 + CT-rich Low_complexity Low_complexity 1 321 0 2 952 302 0 18 70 chr13 48174644 48174701 -72109611 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 2 952 301 349 66 6 chr13 48175143 48175310 -72109002 + L4 LINE RTE 1635 1811 -218 2 952 23 33 0 0 chr13 48176230 48176260 -72108052 + AT_rich Low_complexity Low_complexity 1 30 0 2 952 431 351 48 62 chr13 48177069 48177230 -72107082 + ORR1E LTR MaLR 1 165 -194 2 952 2035 154 15 0 chr13 48177230 48177554 -72106758 + ORR1A4 LTR MaLR 1 329 0 2 952 431 351 48 62 chr13 48177554 48177747 -72106565 + ORR1E LTR MaLR 166 349 -10 2 952 222 37 0 0 chr13 48177842 48177869 -72106443 + (CGTG)n Simple_repeat Simple_repeat 2 28 0 2 952 183 42 0 0 chr13 48179264 48179288 -72105024 + (A)n Simple_repeat Simple_repeat 1 24 0 2 952 2693 228 59 27 chr13 48179345 48179972 -72104340 + Lx6 LINE L1 6813 7459 -1 2 952 378 264 240 0 chr13 48180113 48180242 -72104070 + RSINE1 SINE B4 4 163 -2 2 952 482 91 13 0 chr13 48180460 48180537 -72103775 + (GA)n Simple_repeat Simple_repeat 1 78 0 2 952 21 0 0 0 chr13 48180839 48180860 -72103452 + AT_rich Low_complexity Low_complexity 1 21 0 2 952 269 51 26 0 chr13 48181522 48181561 -72102751 + (TTAG)n Simple_repeat Simple_repeat 1 40 0 2 952 306 0 0 0 chr13 48181586 48181620 -72102692 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 952 324 0 0 0 chr13 48181630 48181666 -72102646 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 952 802 308 45 54 chr13 48183036 48183482 -72100830 + L1MB8 LINE L1 5731 6172 -6 2 952 221 250 14 14 chr13 48183482 48183551 -72100761 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 952 450 270 187 83 chr13 48183568 48183609 -72100703 - B4A SINE B4 -12 280 240 2 952 2362 88 19 0 chr13 48183609 48183926 -72100386 - ORR1A2 LTR MaLR 0 327 5 2 952 450 270 187 83 chr13 48183926 48184060 -72100252 - B4A SINE B4 -53 239 81 2 952 288 0 0 0 chr13 48184060 48184092 -72100220 + (CTATT)n Simple_repeat Simple_repeat 2 33 0 2 952 450 270 187 83 chr13 48184092 48184145 -72100167 - B4A SINE B4 -212 80 27 2 952 228 350 15 68 chr13 48184367 48184499 -72099813 - ORR1E LTR MaLR -186 173 49 2 952 530 45 26 43 chr13 48185627 48185742 -72098570 + (GTTTG)n Simple_repeat Simple_repeat 2 114 0 2 952 221 102 41 0 chr13 48186079 48186128 -72098184 + (CAAAAA)n Simple_repeat Simple_repeat 2 52 0 2 952 207 0 0 0 chr13 48186422 48186445 -72097867 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 952 553 197 47 8 chr13 48186448 48186576 -72097736 - B1_Mur1 SINE Alu 0 149 17 2 952 396 0 0 0 chr13 48186967 48187011 -72097301 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 2 952 244 156 132 4 chr13 48187349 48187419 -72096893 + B1_Mus1 SINE Alu 36 113 -7 2 952 342 0 0 0 chr13 48187421 48187459 -72096853 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 952 26 0 0 0 chr13 48187719 48187745 -72096567 + AT_rich Low_complexity Low_complexity 1 26 0 3 952 865 52 29 7 chr13 48189142 48189279 -72095033 + (TAGA)n Simple_repeat Simple_repeat 3 142 0 3 952 180 97 0 0 chr13 48189403 48189434 -72094878 + (T)n Simple_repeat Simple_repeat 1 31 0 3 952 639 102 25 8 chr13 48190904 48191023 -72093289 + (GAAA)n Simple_repeat Simple_repeat 3 123 0 3 952 862 194 6 18 chr13 48191506 48191674 -72092638 + URR1B DNA MER1_type 1 166 -59 3 952 207 0 0 0 chr13 48191877 48191900 -72092412 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 952 264 288 0 0 chr13 48191963 48192029 -72092283 + ID4_ SINE ID 4 69 -14 3 952 456 202 11 53 chr13 48193638 48193826 -72090486 + G-rich Low_complexity Low_complexity 1 180 0 3 952 197 232 14 0 chr13 48193843 48193912 -72090400 + G-rich Low_complexity Low_complexity 3 72 0 3 952 332 271 33 17 chr13 48194181 48194301 -72090011 + Kanga1a DNA Tc2 616 737 -17 3 952 426 69 0 0 chr13 48195290 48195348 -72088964 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 952 1001 249 78 19 chr13 48195351 48195621 -72088691 - B4 SINE B4 -4 288 3 3 952 262 264 72 0 chr13 48196104 48196219 -72088093 - L1M5 LINE L1 -697 5476 5353 3 952 250 259 86 0 chr13 48196252 48196333 -72087979 + PB1D7 SINE Alu 12 99 -21 3 952 786 205 5 15 chr13 48196342 48196757 -72087555 + GA-rich Low_complexity Low_complexity 1 410 0 3 952 243 0 0 0 chr13 48196957 48196984 -72087328 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 952 526 229 43 27 chr13 48197493 48197677 -72086635 + MER53 DNA hAT 6 192 -1 3 952 200 239 76 43 chr13 48197883 48197975 -72086337 - MIR3 SINE MIR -27 181 87 3 952 26 0 0 0 chr13 48201906 48201932 -72082380 + AT_rich Low_complexity Low_complexity 1 26 0 3 952 885 252 78 61 chr13 48203588 48203934 -72080378 - MTE2b LTR MaLR -21 358 7 3 952 322 213 16 0 chr13 48203962 48204001 -72080311 + polypyrimidine Low_complexity Low_complexity 85 124 0 3 952 1008 68 16 33 chr13 48204001 48204184 -72080128 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 3 952 322 213 16 0 chr13 48204184 48204266 -72080046 + CT-rich Low_complexity Low_complexity 2 84 0 3 952 470 224 10 0 chr13 48204266 48204364 -72079948 - ID_B1 SINE B4 -3 221 123 3 952 492 18 0 0 chr13 48205099 48205156 -72079156 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 952 330 26 0 0 chr13 48205156 48205194 -72079118 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 952 575 304 129 0 chr13 48205194 48205388 -72078924 + B4A SINE B4 54 272 -20 3 952 515 306 82 89 chr13 48205995 48206286 -72078026 + B4A SINE B4 2 290 -2 3 952 393 200 0 0 chr13 48206945 48207034 -72077278 + BC1_Mm scRNA scRNA 11 99 -53 3 952 727 256 79 53 chr13 48207093 48207316 -72076996 + B4A SINE B4 2 230 -62 3 952 242 268 54 40 chr13 48207316 48207390 -72076922 + ID4_ SINE ID 2 76 -7 3 952 510 61 0 0 chr13 48207408 48207474 -72076838 + (CATA)n Simple_repeat Simple_repeat 2 67 0 3 952 320 270 0 0 chr13 48207474 48207537 -72076775 + B4A SINE B4 228 290 -2 3 952 1371 229 7 23 chr13 48207991 48208291 -72076021 - MTD LTR MaLR -3 416 122 3 952 636 14 0 0 chr13 48209043 48209116 -72075196 + (GA)n Simple_repeat Simple_repeat 2 74 0 3 952 3637 213 50 113 chr13 48209193 48210602 -72073710 - RMER1A Other Other -5 1025 21 3 952 211 268 36 0 chr13 48210975 48211031 -72073281 + GA-rich Low_complexity Low_complexity 2 59 0 3 952 1247 335 150 59 chr13 48211244 48212688 -72071624 - MTEa-int LTR MaLR -5 1575 1 3 952 473 314 117 57 chr13 48212709 48213043 -72071269 - MTEa LTR MaLR -23 356 3 3 952 291 54 0 0 chr13 48213127 48213164 -72071148 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 952 2817 129 11 28 chr13 48213509 48213978 -72070334 + RMER4A LTR ERVK 6 466 0 3 952 252 0 0 0 chr13 48215637 48215665 -72068647 + (A)n Simple_repeat Simple_repeat 1 28 0 3 952 22 0 0 0 chr13 48215952 48215974 -72068338 + AT_rich Low_complexity Low_complexity 1 22 0 3 952 219 139 0 0 chr13 48216009 48216045 -72068267 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 952 2328 78 62 0 chr13 48216134 48216442 -72067870 - ORR1A2 LTR MaLR 0 327 1 3 952 446 311 25 0 chr13 48217547 48217666 -72066646 + B1F SINE Alu 1 122 -27 3 952 198 0 0 0 chr13 48218835 48218857 -72065455 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 952 320 365 68 34 chr13 48219066 48219229 -72065083 + L1M5 LINE L1 4147 4314 -1832 3 952 1544 228 71 13 chr13 48219229 48219625 -72064687 + MTD LTR MaLR 1 419 0 3 952 320 365 68 34 chr13 48219625 48219870 -72064442 + L1M5 LINE L1 4315 4568 -1578 3 952 380 290 10 0 chr13 48219945 48220045 -72064267 + ID_B1 SINE B4 78 178 -46 3 952 457 208 39 10 chr13 48219959 48220061 -72064251 + B1F2 SINE Alu 11 115 -34 3 952 1215 74 0 0 chr13 48220535 48220820 -72063492 + (TG)n Simple_repeat Simple_repeat 1 285 0 3 952 245 271 0 48 chr13 48220915 48220977 -72063335 - B4 SINE B4 -9 283 225 3 952 584 250 21 0 chr13 48220989 48221133 -72063179 - B1_Mur1 SINE Alu -2 147 1 3 952 338 232 0 10 chr13 48221135 48221231 -72063081 - HAL1-2a_MD LINE L1 -565 2459 2365 3 952 662 274 32 19 chr13 48221234 48221450 -72062862 - B4 SINE B4 -69 223 5 3 952 259 250 106 0 chr13 48222526 48222630 -72061682 - B1_Mus1 SINE Alu 0 148 34 3 952 555 346 14 28 chr13 48222678 48222892 -72061420 + Tigger5 DNA MER2_type 1 211 -2195 3 952 627 224 14 7 chr13 48222967 48223111 -72061201 - B1_Mus1 SINE Alu -2 146 2 3 952 858 126 0 0 chr13 48224479 48224614 -72059698 + (TCC)n Simple_repeat Simple_repeat 1 135 0 3 952 525 260 96 64 chr13 48224754 48225052 -72059260 + MTEb LTR MaLR 1 321 -58 3 952 276 336 31 16 chr13 48225093 48225220 -72059092 + MER5A DNA MER1_type 28 156 -33 3 952 213 228 213 21 chr13 48225375 48225469 -72058843 + PB1D7 SINE Alu 1 112 -8 3 952 201 348 18 31 chr13 48226621 48226784 -72057528 + (TATG)n Simple_repeat Simple_repeat 1 161 0 3 952 447 19 0 0 chr13 48228287 48228339 -72055973 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 952 232 294 98 119 chr13 48231132 48231275 -72053037 + L2b LINE L2 3219 3358 -17 3 952 243 243 0 0 chr13 48231981 48232051 -72052261 + T-rich Low_complexity Low_complexity 1 70 0 3 952 988 231 9 5 chr13 48232787 48233004 -72051308 - ID_B1 SINE B4 -5 219 2 3 952 202 215 30 15 chr13 48233022 48233088 -72051224 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 952 338 200 0 0 chr13 48233365 48233425 -72050887 + ID_B1 SINE B4 160 219 -5 3 952 506 232 18 0 chr13 48233584 48233696 -72050616 - B3 SINE B2 -98 118 5 3 953 207 0 0 0 chr13 48234559 48234582 -72049730 + (TAA)n Simple_repeat Simple_repeat 2 24 0 3 953 1119 75 14 0 chr13 48235577 48235723 -72048589 + B1_Mus1 SINE Alu 1 148 0 3 953 756 86 0 0 chr13 48235739 48235844 -72048468 + (GGAGA)n Simple_repeat Simple_repeat 2 106 0 3 953 4216 43 2 4 chr13 48236271 48236779 -72047533 - L1_Mus2 LINE L1 0 6566 6060 3 953 471 35 0 0 chr13 48237622 48237679 -72046633 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 3 953 222 279 61 96 chr13 48238206 48238321 -72045991 + B4 SINE B4 2 112 -180 3 953 334 159 32 0 chr13 48238457 48238520 -72045792 + B4 SINE B4 164 228 -64 3 953 2304 190 24 52 chr13 48238527 48239077 -72045235 - RLTR17 LTR ERVK -96 596 105 3 953 291 233 68 0 chr13 48239252 48239325 -72044987 + B1_Mur4 SINE Alu 5 82 -68 3 953 360 0 0 0 chr13 48240240 48240280 -72044032 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 3 953 997 265 112 51 chr13 48240316 48240709 -72043603 + MTD LTR MaLR 1 417 -2 3 953 306 0 0 0 chr13 48240905 48240939 -72043373 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 3 953 222 143 0 0 chr13 48241872 48241921 -72042391 + (A)n Simple_repeat Simple_repeat 1 49 0 3 953 669 227 82 33 chr13 48242028 48242210 -72042102 + B3A SINE B2 2 192 -6 3 953 1328 315 62 26 chr13 48242307 48243061 -72041251 - L1MA8 LINE L1 -69 7182 6402 3 953 483 259 21 7 chr13 48243075 48243275 -72041037 - L1MA8 LINE L1 -686 6442 6232 3 953 251 54 0 26 chr13 48243292 48243330 -72040982 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 3 953 1069 251 77 34 chr13 48243363 48243751 -72040561 - L1MA8 LINE L1 -861 6242 5838 3 953 384 310 141 44 chr13 48243819 48244004 -72040308 - L1MA8 LINE L1 -6656 374 179 3 953 3857 50 21 0 chr13 48244004 48244469 -72039843 + MT2C_Mm LTR ERVL 1 475 0 3 953 384 310 141 44 chr13 48244469 48244580 -72039732 - L1MA8 LINE L1 -6852 178 49 3 953 472 195 212 0 chr13 48246489 48246602 -72037710 + ID_B1 SINE B4 7 143 -81 3 953 316 192 0 0 chr13 48246574 48246626 -72037686 + PB1D7 SINE Alu 35 86 -34 3 953 234 325 107 45 chr13 48246666 48246843 -72037469 + ID_B1 SINE B4 3 190 -34 3 953 333 85 0 0 chr13 48246882 48246929 -72037383 - ORR1B1 LTR MaLR -8 386 340 3 953 578 92 0 0 chr13 48246924 48247011 -72037301 - BC1_Mm scRNA scRNA -65 87 1 3 953 2301 114 3 17 chr13 48247010 48247345 -72036967 - ORR1B1 LTR MaLR -41 353 23 3 953 2644 69 64 46 chr13 48247345 48247738 -72036574 + MTB LTR MaLR 1 400 0 3 953 2301 114 3 17 chr13 48247738 48247760 -72036552 - ORR1B1 LTR MaLR -372 22 1 3 953 390 175 0 0 chr13 48248389 48248503 -72035809 + T-rich Low_complexity Low_complexity 1 114 0 3 953 226 170 55 36 chr13 48248568 48248623 -72035689 - PB1D9 SINE Alu 0 120 65 3 953 594 230 135 38 chr13 48248581 48248766 -72035546 - ID_B1 SINE B4 -11 213 11 3 953 261 83 0 0 chr13 48249723 48249759 -72034553 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 3 953 212 229 0 0 chr13 48249827 48249875 -72034437 + C-rich Low_complexity Low_complexity 1 48 0 3 953 216 0 0 0 chr13 48250057 48250081 -72034231 + (T)n Simple_repeat Simple_repeat 1 24 0 3 953 241 270 0 0 chr13 48250520 48250583 -72033729 + G-rich Low_complexity Low_complexity 1 63 0 3 953 231 285 173 38 chr13 48251544 48251781 -72032531 + B4A SINE B4 5 273 -19 3 953 266 164 18 0 chr13 48251828 48251883 -72032429 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 953 432 0 0 0 chr13 48251884 48251932 -72032380 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 953 33 0 0 0 chr13 48251987 48252020 -72032292 + AT_rich Low_complexity Low_complexity 1 33 0 4 953 834 169 0 0 chr13 48252021 48252157 -72032155 + B1_Mur1 SINE Alu 4 139 -10 4 953 221 146 0 20 chr13 48252909 48252958 -72031354 + (CAA)n Simple_repeat Simple_repeat 2 49 0 4 953 311 167 15 0 chr13 48253397 48253463 -72030849 + (CACCAT)n Simple_repeat Simple_repeat 6 72 0 4 953 190 274 65 0 chr13 48253547 48253609 -72030703 + MIR SINE MIR 82 147 -61 4 953 207 0 0 0 chr13 48256235 48256258 -72028054 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 4 953 186 43 0 0 chr13 48256694 48256717 -72027595 + (A)n Simple_repeat Simple_repeat 1 23 0 4 953 1241 106 78 0 chr13 48257545 48257725 -72026587 - B2_Mm2 SINE B2 0 195 2 4 953 288 0 0 0 chr13 48257795 48257827 -72026485 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 953 788 238 165 8 chr13 48257847 48258084 -72026228 - B4A SINE B4 -14 278 5 4 953 396 266 0 21 chr13 48258458 48258554 -72025758 - B1F SINE Alu -45 104 11 4 953 283 0 47 23 chr13 48258926 48258969 -72025343 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 953 575 142 9 0 chr13 48259086 48259192 -72025120 + CT-rich Low_complexity Low_complexity 1 107 0 4 953 633 128 0 0 chr13 48259682 48259807 -72024505 + (TAGA)n Simple_repeat Simple_repeat 2 126 0 4 953 1890 213 56 23 chr13 48260065 48260497 -72023815 + RLTR41 LTR ERV1 1 446 0 4 953 198 103 0 0 chr13 48260588 48260617 -72023695 + (CCA)n Simple_repeat Simple_repeat 1 29 0 4 953 976 51 0 42 chr13 48260622 48260766 -72023546 - B1_Mus1 SINE Alu -5 143 6 4 953 233 355 0 22 chr13 48260776 48260914 -72023398 + (CAT)n Simple_repeat Simple_repeat 2 136 0 4 953 189 0 0 0 chr13 48262629 48262650 -72021662 + (CAA)n Simple_repeat Simple_repeat 2 22 0 4 953 180 0 0 0 chr13 48263832 48263852 -72020460 + (T)n Simple_repeat Simple_repeat 1 20 0 4 953 305 307 28 0 chr13 48264653 48264767 -72019545 - PB1D10 SINE Alu -1 119 1 4 953 216 0 0 0 chr13 48264951 48264975 -72019337 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 953 316 316 30 15 chr13 48265096 48265231 -72019081 - Lx9 LINE L1 -212 7432 7296 4 953 423 0 0 0 chr13 48265676 48265723 -72018589 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 953 716 261 60 9 chr13 48267796 48268013 -72016299 + B4 SINE B4 1 228 -64 4 953 396 0 0 0 chr13 48268013 48268057 -72016255 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 953 296 281 63 38 chr13 48268296 48268455 -72015857 - MER20 DNA MER1_type -32 187 25 4 953 466 258 48 0 chr13 48268663 48268787 -72015525 - ID_B1 SINE B4 -8 216 87 4 953 284 304 13 0 chr13 48268961 48269040 -72015272 - RSINE1 SINE B4 -43 122 43 4 953 272 302 34 25 chr13 48269089 48269208 -72015104 + PB1D7 SINE Alu 1 120 0 4 953 468 156 15 30 chr13 48269261 48269393 -72014919 + GA-rich Low_complexity Low_complexity 3 132 0 4 953 651 207 0 22 chr13 48269404 48269587 -72014725 + GA-rich Low_complexity Low_complexity 2 180 0 4 953 1329 73 0 0 chr13 48269587 48269765 -72014547 + (GGGGA)n Simple_repeat Simple_repeat 3 180 0 4 953 774 0 0 0 chr13 48269768 48269854 -72014458 + (GAGAA)n Simple_repeat Simple_repeat 1 86 0 4 953 335 119 0 15 chr13 48270913 48270981 -72013331 + (TTTTG)n Simple_repeat Simple_repeat 1 67 0 4 953 1173 69 7 0 chr13 48270981 48271126 -72013186 - B1_Mm SINE Alu 0 147 2 4 953 331 113 28 0 chr13 48271459 48271530 -72012782 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 4 953 715 103 34 28 chr13 48271553 48271732 -72012580 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 4 953 198 207 0 108 chr13 48271769 48271834 -72012478 + L4 LINE RTE 619 676 -1353 4 953 382 304 17 9 chr13 48271913 48272029 -72012283 - B4A SINE B4 -175 117 1 4 953 186 71 0 0 chr13 48273232 48273260 -72011052 + (A)n Simple_repeat Simple_repeat 1 28 0 4 953 305 189 27 0 chr13 48273347 48273421 -72010891 + CT-rich Low_complexity Low_complexity 2 77 0 4 953 327 25 0 0 chr13 48273993 48274033 -72010279 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 953 281 279 0 0 chr13 48274242 48274303 -72010009 + ID4_ SINE ID 20 80 -3 4 953 235 295 47 104 chr13 48274856 48275048 -72009264 - MER45B DNA Tip100 -4 1036 858 4 953 383 333 0 0 chr13 48275048 48275165 -72009147 + PB1D10 SINE Alu 1 117 0 4 953 235 295 47 104 chr13 48275165 48275184 -72009128 - MER45B DNA Tip100 -183 857 837 4 953 393 212 50 21 chr13 48275185 48275325 -72008987 - MER45B DNA Tip100 -167 873 730 4 953 341 232 7 21 chr13 48276110 48276255 -72008057 + (TATG)n Simple_repeat Simple_repeat 1 143 0 4 953 408 272 87 89 chr13 48277079 48277461 -72006851 + MLT1A1 LTR MaLR 1 405 -3 4 953 360 23 0 0 chr13 48277574 48277618 -72006694 - ORR1A2 LTR MaLR -8 318 275 4 953 967 147 54 12 chr13 48277620 48277905 -72006407 + CT-rich Low_complexity Low_complexity 1 297 0 4 953 1347 72 0 0 chr13 48277905 48278085 -72006227 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 4 953 305 147 125 13 chr13 48278085 48278098 -72006214 + polypyrimidine Low_complexity Low_complexity 3 15 0 4 953 576 0 0 0 chr13 48278098 48278162 -72006150 + (TTTTC)n Simple_repeat Simple_repeat 4 67 0 4 953 1039 82 0 0 chr13 48278164 48278298 -72006014 - B1_Mus1 SINE Alu -13 135 2 4 953 2056 74 11 0 chr13 48278298 48278581 -72005731 - ORR1A2 LTR MaLR -41 286 1 4 953 710 224 6 39 chr13 48279571 48279752 -72004560 - B3 SINE B2 0 216 42 4 953 489 257 2 36 chr13 48280964 48280981 -72003331 - B1F SINE Alu 0 148 67 4 953 310 297 23 38 chr13 48280981 48281114 -72003198 - ID_B1 SINE B4 -3 221 91 4 953 489 257 2 36 chr13 48281114 48281125 -72003187 - B1F SINE Alu 0 66 1 4 953 209 307 0 38 chr13 48282421 48282455 -72001857 + polypurine Low_complexity Low_complexity 2 35 0 4 953 623 244 0 16 chr13 48282455 48282584 -72001728 + B1F SINE Alu 5 131 -18 4 953 209 307 0 38 chr13 48282584 48282654 -72001658 + GA-rich Low_complexity Low_complexity 36 102 0 4 953 280 340 62 62 chr13 48282874 48283051 -72001261 + Lx8 LINE L1 7151 7336 -137 4 953 231 36 0 0 chr13 48283051 48283079 -72001233 + (CAA)n Simple_repeat Simple_repeat 3 30 0 4 953 280 340 62 62 chr13 48283079 48283221 -72001091 + Lx8 LINE L1 7337 7470 -3 4 953 195 220 0 0 chr13 48283463 48283513 -72000799 + GA-rich Low_complexity Low_complexity 1 50 0 4 953 830 279 78 11 chr13 48283728 48283996 -72000316 + B4 SINE B4 3 288 -4 4 953 236 318 0 0 chr13 48284272 48284335 -71999977 - ID2 SINE ID -17 66 4 4 953 473 292 85 28 chr13 48284399 48284575 -71999737 - ID_B1 SINE B4 -34 190 5 4 953 223 186 0 23 chr13 48285490 48285534 -71998778 + CT-rich Low_complexity Low_complexity 3 45 0 4 953 856 158 13 27 chr13 48285534 48285684 -71998628 - B1_Mus1 SINE Alu 0 148 1 4 953 636 257 137 24 chr13 48285835 48286090 -71998222 - B4 SINE B4 -2 290 7 4 953 1877 279 104 40 chr13 48286570 48287351 -71996961 - Lx8 LINE L1 -6 7467 6637 4 953 555 16 0 0 chr13 48288262 48288326 -71995986 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 953 219 344 92 23 chr13 48288549 48288680 -71995632 - MIRb SINE MIR -76 192 53 4 953 184 314 158 24 chr13 48289378 48289505 -71994807 - MIRb SINE MIR -84 184 41 4 953 464 323 8 8 chr13 48289752 48289886 -71994426 + RSINE1 SINE B4 3 136 -29 4 953 201 74 0 0 chr13 48289891 48289918 -71994394 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 953 593 113 10 0 chr13 48289955 48290052 -71994260 + ORR1A2 LTR MaLR 1 98 -229 4 953 2300 104 3 58 chr13 48290052 48290398 -71993914 + ORR1A2 LTR MaLR 1 327 0 4 953 629 264 87 72 chr13 48291818 48292216 -71992096 - MTD LTR MaLR -18 403 18 4 953 225 100 71 48 chr13 48292830 48292872 -71991440 + L1_Rod LINE L1 1791 1833 -4014 4 953 387 0 0 0 chr13 48293257 48293300 -71991012 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 953 2437 83 61 3 chr13 48293659 48293986 -71990326 + ORR1A1 LTR MaLR 1 346 0 4 953 3098 54 26 4 chr13 48293986 48294588 -71989724 + ORR1A1-int LTR MaLR 1 426 -1366 4 953 1036 169 72 9 chr13 48295382 48295603 -71988709 - ORR1C2 LTR MaLR 0 384 150 4 953 1049 64 0 7 chr13 48295609 48295751 -71988561 - B1_Mus2 SINE Alu 0 147 7 4 953 855 170 0 7 chr13 48295748 48295902 -71988410 - ORR1C2 LTR MaLR -221 153 1 4 953 373 287 160 0 chr13 48295902 48295995 -71988317 + B4 SINE B4 51 158 -134 4 953 429 225 88 18 chr13 48296079 48296192 -71988120 + B4A SINE B4 167 287 -5 4 953 204 240 0 0 chr13 48296201 48296251 -71988061 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 4 953 256 146 0 0 chr13 48296525 48296566 -71987746 + B1_Mur4 SINE Alu 2 42 -108 4 953 300 308 122 44 chr13 48296716 48297124 -71987188 + L1ME1 LINE L1 4662 5101 -1045 4 953 586 317 6 20 chr13 48297403 48297606 -71986706 + B3A SINE B2 16 213 -3 4 953 482 248 96 60 chr13 48297662 48297911 -71986401 + L1ME1 LINE L1 5616 5873 -306 4 953 651 227 165 92 chr13 48298073 48298225 -71986087 - MTD LTR MaLR -85 334 183 4 953 1078 236 0 19 chr13 48298225 48298437 -71985875 - B3 SINE B2 -7 209 2 4 953 651 227 165 92 chr13 48298437 48298556 -71985756 - MTD LTR MaLR -237 182 43 4 953 2731 243 177 36 chr13 48298587 48299682 -71984630 - MTD-int LTR MaLR -6 1252 3 4 953 779 259 181 9 chr13 48299684 48300027 -71984285 - MTD LTR MaLR 0 419 18 4 953 468 268 52 66 chr13 48300256 48300392 -71983920 + RSINE1 SINE B4 2 135 -30 4 953 211 368 11 0 chr13 48300820 48300907 -71983405 + B4A SINE B4 4 91 -201 4 953 530 196 124 9 chr13 48300925 48301038 -71983274 + B4A SINE B4 153 278 -14 4 953 344 181 12 0 chr13 48301060 48301143 -71983169 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 953 314 227 0 0 chr13 48301317 48301383 -71982929 + RSINE1 SINE B4 17 82 -83 4 953 557 85 51 19 chr13 48304185 48304341 -71979971 + (TAGA)n Simple_repeat Simple_repeat 1 161 0 4 953 434 185 52 19 chr13 48304431 48304585 -71979727 + (TAGA)n Simple_repeat Simple_repeat 3 161 0 4 953 450 0 0 0 chr13 48304605 48304655 -71979657 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 4 953 698 297 75 4 chr13 48304770 48305010 -71979302 - MLT2B2 LTR ERVL -232 283 27 4 953 243 0 0 0 chr13 48305658 48305685 -71978627 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 953 1145 129 37 5 chr13 48305692 48305879 -71978433 - B2_Mm2 SINE B2 -2 193 1 4 953 1670 279 112 23 chr13 48305909 48306599 -71977713 - Lx8 LINE L1 -5 7468 6718 5 953 1169 275 65 22 chr13 48306602 48307004 -71977308 - MTD LTR MaLR 0 419 1 5 953 979 297 51 15 chr13 48307006 48307338 -71976974 - Lx8 LINE L1 -756 6717 6374 5 953 690 249 11 31 chr13 48307530 48307721 -71976591 + B3A SINE B2 1 187 -11 5 953 429 109 0 0 chr13 48307724 48307788 -71976524 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 953 586 273 37 18 chr13 48308753 48308917 -71975395 - B3 SINE B2 -28 188 22 5 953 3715 161 112 70 chr13 48308936 48309790 -71974522 - RMER19B LTR ERVK -12 890 1 5 953 557 178 0 9 chr13 48311145 48311253 -71973059 - RSINE1 SINE B4 -54 111 5 5 953 200 118 0 29 chr13 48312300 48312335 -71971977 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 5 953 788 263 139 10 chr13 48312571 48312874 -71971438 - MTEa LTR MaLR -37 342 1 5 953 670 305 76 40 chr13 48312879 48313180 -71971132 + MER2 DNA MER2_type 12 323 -22 5 953 1806 208 30 11 chr13 48313278 48313643 -71970669 - ORR1D1 LTR MaLR 0 374 3 5 953 39 0 0 0 chr13 48313887 48313926 -71970386 + AT_rich Low_complexity Low_complexity 1 39 0 5 953 282 292 30 37 chr13 48314370 48314505 -71969807 + GA-rich Low_complexity Low_complexity 3 136 0 5 953 330 272 22 0 chr13 48314541 48314633 -71969679 + B4A SINE B4 3 96 -196 5 953 273 311 0 13 chr13 48314699 48314774 -71969538 + B4A SINE B4 193 266 -26 5 953 295 252 141 30 chr13 48314953 48315088 -71969224 + ORR1E LTR MaLR 2 151 -208 5 953 1503 269 76 9 chr13 48315290 48315740 -71968572 + MTE-int LTR MaLR 7 486 -1094 5 953 1270 124 38 17 chr13 48315758 48315995 -71968317 - RLTR11A LTR ERVK 0 528 287 5 953 206 125 21 0 chr13 48315997 48316045 -71968267 + (TTTTTG)n Simple_repeat Simple_repeat 3 51 0 5 953 232 48 48 0 chr13 48316104 48316146 -71968166 + (TTTTTG)n Simple_repeat Simple_repeat 5 48 0 5 953 1196 55 7 0 chr13 48316146 48316292 -71968020 - B1_Mus1 SINE Alu 0 148 2 5 953 1520 157 14 20 chr13 48316292 48316584 -71967728 - RLTR11A LTR ERVK -232 296 7 5 953 390 42 0 0 chr13 48317347 48317395 -71966917 + (TTTTG)n Simple_repeat Simple_repeat 4 51 0 5 953 717 167 0 0 chr13 48317395 48317521 -71966791 - B1_Mur1 SINE Alu -12 137 12 5 953 360 0 0 0 chr13 48317579 48317619 -71966693 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 953 327 330 8 43 chr13 48317620 48317737 -71966575 + L1MDa LINE L1 717 829 -5804 5 953 434 261 39 60 chr13 48317939 48317972 -71966340 + L1MDa LINE L1 1289 1311 -5322 5 953 324 0 0 0 chr13 48317972 48318008 -71966304 + (TAA)n Simple_repeat Simple_repeat 3 38 0 5 953 434 261 39 60 chr13 48318008 48318206 -71966106 + L1MDa LINE L1 1312 1515 -5118 5 953 1790 257 25 52 chr13 48318776 48319417 -71964895 + L1MDa LINE L1 3875 4498 -2039 5 953 228 228 0 0 chr13 48320008 48320065 -71964247 + (CTATT)n Simple_repeat Simple_repeat 2 58 0 5 953 442 241 36 50 chr13 48320067 48320207 -71964105 - B1_Mur2 SINE Alu -11 138 1 5 953 227 254 17 0 chr13 48320260 48320319 -71963993 - L1M5 LINE L1 -294 5885 5826 5 953 522 83 0 0 chr13 48320507 48320579 -71963733 + (TA)n Simple_repeat Simple_repeat 2 73 0 5 953 283 304 137 29 chr13 48320630 48320769 -71963543 + RSINE1 SINE B4 4 157 -8 5 953 636 14 0 0 chr13 48320900 48320973 -71963339 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 5 953 541 82 10 49 chr13 48321079 48321181 -71963131 + (TA)n Simple_repeat Simple_repeat 1 98 0 5 953 663 210 7 55 chr13 48321290 48321436 -71962876 + B1F SINE Alu 3 141 -8 5 953 211 54 0 51 chr13 48322252 48322291 -71962021 + (CAAAA)n Simple_repeat Simple_repeat 4 40 0 5 953 1322 41 6 0 chr13 48322907 48323076 -71961236 + (GGA)n Simple_repeat Simple_repeat 2 171 0 5 953 1545 198 31 60 chr13 48324424 48324584 -71959728 - ORR1D2 LTR MaLR 0 370 221 5 953 1517 130 107 66 chr13 48324584 48324978 -71959334 - RMER17C LTR ERVK 0 410 1 5 953 1545 198 31 60 chr13 48324978 48325198 -71959114 - ORR1D2 LTR MaLR -150 220 1 5 953 596 310 55 40 chr13 48325208 48325247 -71959065 + Lx8 LINE L1 5593 5629 -1844 5 953 2982 142 35 18 chr13 48325247 48325762 -71958550 + RLTR28 LTR ERVL 1 524 0 5 953 596 310 55 40 chr13 48325762 48326051 -71958261 + Lx8 LINE L1 5630 5926 -1547 5 953 203 218 0 18 chr13 48326052 48326108 -71958204 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 953 723 286 125 28 chr13 48327051 48327371 -71956941 + ORR1E LTR MaLR 4 354 -5 5 953 429 216 11 0 chr13 48328255 48328343 -71955969 + MER5B DNA MER1_type 90 178 0 5 953 270 0 0 0 chr13 48328557 48328587 -71955725 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 953 404 235 20 0 chr13 48328751 48328849 -71955463 + B1F SINE Alu 10 109 -40 5 953 273 274 64 28 chr13 48328849 48328860 -71955452 + ID_B1 SINE B4 91 203 -21 5 953 1257 76 0 2 chr13 48329215 48329690 -71954622 + (GGA)n Simple_repeat Simple_repeat 1 474 0 5 953 823 244 10 19 chr13 48330115 48330324 -71953988 - B3 SINE B2 -5 211 5 5 953 727 111 0 0 chr13 48330846 48330954 -71953358 - B1_Mm SINE Alu -37 110 3 5 953 416 52 0 0 chr13 48330955 48331013 -71953299 + B1_Mur4 SINE Alu 93 150 0 5 953 29 47 0 0 chr13 48331166 48331209 -71953103 + AT_rich Low_complexity Low_complexity 1 43 0 5 953 340 313 0 0 chr13 48331385 48331468 -71952844 + ID4_ SINE ID 1 83 0 5 953 475 198 146 0 chr13 48331536 48331632 -71952680 - B1F SINE Alu -32 117 8 5 953 21 0 0 0 chr13 48332982 48333003 -71951309 + AT_rich Low_complexity Low_complexity 1 21 0 5 953 261 0 0 0 chr13 48333833 48333862 -71950450 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 953 416 311 45 55 chr13 48334063 48334352 -71949960 + ORR1E LTR MaLR 59 363 -16 5 953 908 240 72 16 chr13 48334476 48334781 -71949531 + L1MC3 LINE L1 7464 7785 0 5 953 190 98 73 0 chr13 48334801 48334842 -71949470 + GA-rich Low_complexity Low_complexity 2 45 0 5 953 969 260 65 14 chr13 48335175 48335452 -71948860 + B4 SINE B4 2 292 0 5 953 226 217 0 0 chr13 48335460 48335506 -71948806 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 953 273 217 57 14 chr13 48336770 48336840 -71947472 + MLT1A1 LTR MaLR 13 85 -323 5 953 351 0 0 0 chr13 48337154 48337193 -71947119 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 953 414 278 67 8 chr13 48337214 48337348 -71946964 + B4 SINE B4 151 292 0 5 953 306 265 0 0 chr13 48337349 48337559 -71946753 + (CA)n Simple_repeat Simple_repeat 1 210 0 5 953 941 127 21 7 chr13 48337680 48337823 -71946489 - B1_Mur3 SINE Alu 0 149 5 5 953 374 267 80 15 chr13 48338349 48338486 -71945826 + B3A SINE B2 53 198 0 5 953 180 0 0 0 chr13 48339660 48339680 -71944632 + (T)n Simple_repeat Simple_repeat 1 20 0 5 953 249 262 0 16 chr13 48339756 48339818 -71944494 + B1F SINE Alu 3 63 -86 5 953 242 217 61 62 chr13 48341093 48341183 -71943129 - B1F SINE Alu -2 147 51 5 953 294 143 0 0 chr13 48341496 48341545 -71942767 + (CAT)n Simple_repeat Simple_repeat 2 50 0 5 953 217 352 46 15 chr13 48341593 48341723 -71942589 + L2 LINE L2 2146 2279 -1140 5 953 1143 270 57 26 chr13 48341774 48341929 -71942383 - MTEa LTR MaLR -13 366 210 5 953 414 0 0 0 chr13 48341929 48341975 -71942337 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 953 1143 270 57 26 chr13 48341975 48342169 -71942143 - MTEa LTR MaLR -170 209 7 5 953 1162 62 0 20 chr13 48342375 48342523 -71941789 + B1_Mm SINE Alu 3 147 0 5 953 282 123 0 0 chr13 48342671 48342728 -71941584 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 953 230 344 0 0 chr13 48342779 48342840 -71941472 - RSINE1 SINE B4 -77 88 28 5 953 810 212 70 5 chr13 48343777 48343976 -71940336 + B3 SINE B2 2 213 -3 5 953 245 182 18 0 chr13 48344328 48344383 -71939929 + (CAT)n Simple_repeat Simple_repeat 2 57 0 5 953 22 0 0 0 chr13 48344840 48344862 -71939450 + AT_rich Low_complexity Low_complexity 1 22 0 5 953 475 325 12 30 chr13 48344868 48345033 -71939279 - RSINE1 SINE B4 -2 163 2 5 953 953 233 19 9 chr13 48346622 48346834 -71937478 + B3 SINE B2 1 214 -2 5 953 180 0 0 0 chr13 48347323 48347343 -71936969 + (T)n Simple_repeat Simple_repeat 1 20 0 5 953 312 27 0 0 chr13 48347781 48347818 -71936494 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 953 365 297 0 21 chr13 48347826 48347958 -71936354 - MLT1A1 LTR MaLR -16 392 236 5 953 291 316 8 50 chr13 48348100 48348220 -71936092 - MLT1A1 LTR MaLR -235 130 16 5 953 31 0 0 0 chr13 48349096 48349127 -71935185 + AT_rich Low_complexity Low_complexity 1 31 0 5 953 882 214 149 12 chr13 48349269 48349524 -71934788 + B4A SINE B4 1 290 -2 5 953 1111 233 30 103 chr13 48350076 48350445 -71933867 + ORR1E LTR MaLR 5 346 -13 5 953 433 160 423 47 chr13 48350442 48350647 -71933665 - ORR1D2 LTR MaLR -62 308 26 5 953 195 42 0 0 chr13 48350647 48350671 -71933641 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 5 953 433 157 88 32 chr13 48350671 48350695 -71933617 - ORR1D2 LTR MaLR -345 25 1 5 953 360 0 0 0 chr13 48351847 48351887 -71932425 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 953 229 331 65 27 chr13 48351964 48352150 -71932162 + L1M4 LINE L1 4623 4815 -1331 5 953 460 242 133 22 chr13 48352374 48352509 -71931803 + ID_B1 SINE B4 73 222 -2 5 953 420 55 0 0 chr13 48352509 48352564 -71931748 + (CATA)n Simple_repeat Simple_repeat 2 56 0 5 953 210 162 0 0 chr13 48352695 48352732 -71931580 + A-rich Low_complexity Low_complexity 1 37 0 5 953 297 89 0 0 chr13 48354505 48354550 -71929762 + (TATG)n Simple_repeat Simple_repeat 4 48 0 5 953 435 19 0 0 chr13 48354645 48354697 -71929615 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 953 216 0 0 0 chr13 48355348 48355372 -71928940 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 953 209 242 0 69 chr13 48356296 48356398 -71927914 + C-rich Low_complexity Low_complexity 4 98 0 5 953 183 100 0 0 chr13 48356662 48356692 -71927620 + (A)n Simple_repeat Simple_repeat 1 30 0 5 953 23 33 0 0 chr13 48356983 48357013 -71927299 + GC_rich Low_complexity Low_complexity 1 30 0 5 953 225 0 0 0 chr13 48358461 48358486 -71925826 + (GA)n Simple_repeat Simple_repeat 2 26 0 5 953 30 45 0 0 chr13 48358941 48358985 -71925327 + AT_rich Low_complexity Low_complexity 1 44 0 5 953 228 141 62 0 chr13 48361661 48361725 -71922587 + GA-rich Low_complexity Low_complexity 2 69 0 6 953 896 207 14 46 chr13 48363103 48363321 -71920991 - B3 SINE B2 -2 214 4 6 953 526 229 191 69 chr13 48363533 48363721 -71920591 + ID_B1 SINE B4 4 214 -10 6 953 530 287 7 0 chr13 48364617 48364760 -71919552 + B1_Mur3 SINE Alu 1 144 -5 6 953 189 196 0 0 chr13 48364769 48364815 -71919497 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 953 418 270 214 41 chr13 48364867 48365035 -71919277 - B4A SINE B4 0 292 82 6 953 396 0 0 0 chr13 48365035 48365079 -71919233 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 953 418 312 74 5 chr13 48365079 48365153 -71919159 - B4A SINE B4 -210 82 9 6 954 1151 82 0 0 chr13 48365747 48365894 -71918418 + B1_Mus2 SINE Alu 1 147 0 6 954 350 250 111 8 chr13 48366393 48366510 -71917802 + B1F2 SINE Alu 4 132 -17 6 954 382 180 48 48 chr13 48366858 48366963 -71917349 + B3 SINE B2 112 216 0 6 954 328 222 24 36 chr13 48366991 48367075 -71917237 + B3A SINE B2 17 99 -99 6 954 234 0 0 0 chr13 48367518 48367544 -71916768 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 954 307 0 47 0 chr13 48367933 48367976 -71916336 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 954 786 190 28 0 chr13 48368487 48368629 -71915683 + B1_Mus2 SINE Alu 2 147 0 6 954 522 46 0 0 chr13 48368787 48368852 -71915460 + (TC)n Simple_repeat Simple_repeat 2 66 0 6 954 234 0 0 0 chr13 48369602 48369628 -71914684 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 954 300 255 38 0 chr13 48369656 48369762 -71914550 + (TG)n Simple_repeat Simple_repeat 2 111 0 6 954 271 96 19 19 chr13 48369790 48369843 -71914469 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 954 254 132 0 19 chr13 48369914 48369968 -71914344 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 954 405 231 33 41 chr13 48370362 48370484 -71913828 + L1MA4 LINE L1 5764 5884 -416 6 954 776 156 4 4 chr13 48370734 48371207 -71913105 + (CAGAGA)n Simple_repeat Simple_repeat 1 473 0 6 954 416 198 34 59 chr13 48371818 48371936 -71912376 - Lx2B LINE L1 -2 6998 6884 6 954 333 259 60 8 chr13 48372231 48372348 -71911964 + MER45A DNA Tip100 45 167 -11 6 954 258 32 0 0 chr13 48373895 48373926 -71910386 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 954 304 77 19 19 chr13 48373934 48373987 -71910325 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 954 219 152 0 0 chr13 48373991 48374037 -71910275 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 6 954 1211 49 0 0 chr13 48374037 48374180 -71910132 - B1_Mus1 SINE Alu -5 143 1 6 954 274 185 0 0 chr13 48374180 48374234 -71910078 - L1M2 LINE L1 -514 5783 5730 6 954 180 125 0 0 chr13 48374241 48374273 -71910039 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 954 244 299 25 38 chr13 48374524 48374604 -71909708 + RSINE1 SINE B4 85 163 -2 6 954 372 43 0 0 chr13 48374617 48374663 -71909649 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 954 269 206 40 14 chr13 48374835 48374909 -71909403 + (CATATA)n Simple_repeat Simple_repeat 4 79 0 6 954 261 0 0 0 chr13 48374962 48374991 -71909321 + (TA)n Simple_repeat Simple_repeat 1 29 0 6 954 333 118 0 0 chr13 48374991 48375041 -71909271 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 954 193 274 33 77 chr13 48375335 48375426 -71908886 + L2b LINE L2 3261 3347 -28 6 954 38 51 0 0 chr13 48375600 48375659 -71908653 + AT_rich Low_complexity Low_complexity 1 59 0 6 954 679 259 0 44 chr13 48376403 48376585 -71907727 + B3A SINE B2 2 175 -23 6 954 383 162 30 10 chr13 48377128 48377228 -71907084 + (TA)n Simple_repeat Simple_repeat 2 103 0 6 954 302 341 23 17 chr13 48377365 48377538 -71906774 - MER5B DNA MER1_type -1 177 4 6 954 361 322 47 6 chr13 48377664 48377836 -71906476 - MER53 DNA hAT 0 193 15 6 954 285 232 124 21 chr13 48378064 48378161 -71906151 + PB1D10 SINE Alu 1 107 -10 6 954 21 0 0 0 chr13 48378326 48378347 -71905965 + AT_rich Low_complexity Low_complexity 1 21 0 6 954 2994 133 118 77 chr13 48379146 48379733 -71904579 - RMER19C LTR ERVK 0 611 1 6 954 288 0 0 0 chr13 48380675 48380707 -71903605 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 954 382 330 32 124 chr13 48381786 48382042 -71902270 + B4A SINE B4 1 244 -48 6 954 1121 71 0 0 chr13 48382042 48382183 -71902129 + B1_Mus1 SINE Alu 1 141 -7 6 954 382 330 32 124 chr13 48382183 48382241 -71902071 + B4A SINE B4 245 286 -6 6 954 345 109 0 0 chr13 48382249 48382304 -71902008 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 954 462 300 12 24 chr13 48382310 48382474 -71901838 + RSINE1 SINE B4 1 162 -3 6 954 339 239 0 0 chr13 48384687 48384796 -71899516 + (TA)n Simple_repeat Simple_repeat 2 110 0 6 954 186 43 0 0 chr13 48386261 48386284 -71898028 + (A)n Simple_repeat Simple_repeat 1 23 0 6 954 234 0 0 0 chr13 48386435 48386461 -71897851 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 954 516 72 0 0 chr13 48386461 48386530 -71897782 + (GA)n Simple_repeat Simple_repeat 2 70 0 6 954 227 288 0 0 chr13 48386531 48386590 -71897722 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 954 422 233 0 6 chr13 48386601 48386782 -71897530 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 954 362 228 6 0 chr13 48386849 48387007 -71897305 + (TG)n Simple_repeat Simple_repeat 2 160 0 6 954 183 289 80 32 chr13 48387652 48387777 -71896535 + MIRb SINE MIR 67 197 -71 6 954 1551 201 64 14 chr13 48387913 48388272 -71896040 - MTD LTR MaLR -40 379 3 6 954 492 219 44 66 chr13 48388437 48388574 -71895738 + RSINE1 SINE B4 3 136 -29 6 954 246 218 11 124 chr13 48388629 48388718 -71895594 - Charlie4z DNA MER1_type -88 79 1 6 954 649 79 5 97 chr13 48388762 48388958 -71895354 + CT-rich Low_complexity Low_complexity 3 180 0 6 954 315 141 35 23 chr13 48388995 48389082 -71895230 + CT-rich Low_complexity Low_complexity 3 90 0 6 954 219 36 0 0 chr13 48389084 48389112 -71895200 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 954 216 86 0 0 chr13 48389114 48389149 -71895163 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 6 954 313 336 87 51 chr13 48389589 48389727 -71894585 + MTEa LTR MaLR 11 153 -226 6 954 3523 102 44 0 chr13 48389760 48390261 -71894051 - Lx2 LINE L1 0 6997 6475 6 954 712 221 0 0 chr13 48390294 48390425 -71893887 + MTEa LTR MaLR 249 379 0 6 954 624 228 30 100 chr13 48391060 48391260 -71893052 + B4A SINE B4 1 186 -106 6 954 357 292 52 26 chr13 48391261 48391377 -71892935 + MTEa LTR MaLR 259 377 -2 6 954 619 281 122 51 chr13 48391596 48392102 -71892210 - L1MC3 LINE L1 -358 7427 6911 6 954 35971 36 1 0 chr13 48392449 48398279 -71886033 + L1Md_T LINE L1 1 5589 -297 6 954 9203 4 0 0 chr13 48398279 48399275 -71885037 + L1Md_T LINE L1 5590 6585 0 6 954 255 79 0 0 chr13 48399651 48399689 -71884623 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 954 283 103 0 0 chr13 48399697 48399736 -71884576 - B4A SINE B4 -66 226 188 6 954 193 49 98 0 chr13 48399740 48399781 -71884531 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 6 954 1796 233 85 26 chr13 48399890 48400349 -71883963 + RMER19C LTR ERVK 126 611 0 6 954 263 299 98 49 chr13 48400874 48401057 -71883255 - CR1_Mam LINE CR1 -642 1562 1371 6 954 1121 250 74 92 chr13 48401627 48401688 -71882624 + MTEb LTR MaLR 6 62 -317 6 954 3455 35 2 0 chr13 48401688 48402083 -71882229 + MTA_Mm LTR MaLR 1 396 0 6 954 1121 250 74 92 chr13 48402083 48402400 -71881912 + MTEb LTR MaLR 63 377 -2 6 954 801 313 61 44 chr13 48402454 48402865 -71881447 - L1MC1 LINE L1 -6 6327 5910 6 954 486 0 0 0 chr13 48402900 48402954 -71881358 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 954 227 171 0 0 chr13 48402970 48403011 -71881301 - L1MC1 LINE L1 -516 5817 5777 6 954 372 333 56 0 chr13 48403016 48403232 -71881080 - L1ME3A LINE L1 -7 6166 5939 6 954 279 0 0 0 chr13 48403984 48404015 -71880297 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 954 500 227 176 0 chr13 48404753 48404872 -71879440 + ID_B1 SINE B4 78 217 -7 6 954 775 128 14 0 chr13 48404876 48405017 -71879295 + (TAGA)n Simple_repeat Simple_repeat 1 143 0 6 954 396 155 0 0 chr13 48405053 48405124 -71879188 + (CA)n Simple_repeat Simple_repeat 1 71 0 6 954 240 303 36 71 chr13 48405351 48405603 -71878709 + L1MD3 LINE L1 6853 7095 -900 6 954 1222 41 0 0 chr13 48405625 48405771 -71878541 + B1_Mus1 SINE Alu 2 147 -1 6 954 538 287 65 38 chr13 48405822 48406112 -71878200 + L1MD3 LINE L1 7350 7647 -348 6 954 1119 238 92 65 chr13 48406159 48406527 -71877785 - MTEa LTR MaLR -1 378 1 6 954 681 226 204 60 chr13 48407126 48407376 -71876936 + B4A SINE B4 1 286 -6 6 954 252 0 0 0 chr13 48407426 48407454 -71876858 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 954 330 228 58 115 chr13 48407560 48407604 -71876708 - B4 SINE B4 -80 212 115 6 954 382 176 0 98 chr13 48407604 48407686 -71876626 - PB1D9 SINE Alu -37 83 10 6 954 330 228 58 115 chr13 48407686 48407699 -71876613 - B4 SINE B4 -80 114 82 6 954 1844 206 19 5 chr13 48410528 48410895 -71873417 + ORR1D1 LTR MaLR 3 374 0 6 954 634 270 58 31 chr13 48411147 48411338 -71872974 + B3A SINE B2 1 196 -2 6 954 446 348 41 10 chr13 48411482 48411775 -71872537 - L1MD LINE L1 -3312 2834 2533 6 954 369 0 0 0 chr13 48412611 48412652 -71871660 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 954 779 290 27 9 chr13 48413393 48413612 -71870700 + B4A SINE B4 48 270 -22 6 954 504 0 0 0 chr13 48413613 48413669 -71870643 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 954 293 319 40 34 chr13 48414737 48414886 -71869426 - L2a LINE L2 -9 3417 3268 6 954 354 350 51 60 chr13 48416397 48416631 -71867681 + MIR SINE MIR 14 245 -23 6 954 315 164 29 0 chr13 48416714 48416818 -71867494 + CT-rich Low_complexity Low_complexity 2 108 0 6 954 481 285 217 75 chr13 48416992 48417443 -71866869 - MLT2B2 LTR ERVL 0 515 1 6 954 382 226 0 51 chr13 48417677 48417775 -71866537 + B4A SINE B4 107 199 -93 6 954 353 314 93 37 chr13 48417771 48417933 -71866379 - B4A SINE B4 -118 174 4 6 954 3616 20 0 0 chr13 48418026 48418422 -71865890 + MTA_Mm LTR MaLR 1 396 0 6 954 1003 94 12 12 chr13 48418516 48418678 -71865634 + (TTTTC)n Simple_repeat Simple_repeat 4 165 0 6 954 496 245 0 26 chr13 48418688 48418801 -71865511 - PB1D10 SINE Alu -1 116 7 7 954 799 310 15 0 chr13 48419015 48419215 -71865097 + ID_B1 SINE B4 1 203 -21 7 954 219 184 0 0 chr13 48419185 48419223 -71865089 + PB1D7 SINE Alu 66 103 -17 7 954 414 100 0 0 chr13 48419249 48419309 -71865003 + (CAT)n Simple_repeat Simple_repeat 3 62 0 7 954 198 0 0 0 chr13 48419553 48419575 -71864737 + (A)n Simple_repeat Simple_repeat 1 22 0 7 954 558 0 0 0 chr13 48420088 48420150 -71864162 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 954 210 37 0 0 chr13 48420868 48420895 -71863417 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 7 954 281 312 54 0 chr13 48421472 48421584 -71862728 + MIRb SINE MIR 92 209 -59 7 954 486 0 0 0 chr13 48421796 48421850 -71862462 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 954 1243 84 72 6 chr13 48422729 48422909 -71861403 + B2_Mm2 SINE B2 4 195 0 7 954 332 130 0 18 chr13 48423633 48423688 -71860624 - Lx8 LINE L1 -201 7272 7219 7 954 480 310 1 13 chr13 48424108 48424276 -71860036 - L1ME2 LINE L1 -2080 5915 5748 7 954 596 276 246 39 chr13 48425562 48425600 -71858712 - MTEa LTR MaLR -4 375 335 7 954 234 0 0 0 chr13 48425600 48425626 -71858686 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 954 596 276 246 39 chr13 48425626 48425896 -71858416 - MTEa LTR MaLR -45 334 4 7 954 288 0 0 0 chr13 48426981 48427013 -71857299 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 7 954 218 356 69 0 chr13 48427080 48427167 -71857145 + MIRc SINE MIR 170 262 -6 7 954 23 0 0 0 chr13 48427245 48427268 -71857044 + AT_rich Low_complexity Low_complexity 1 23 0 7 954 182 175 175 0 chr13 48428012 48428052 -71856260 - L3b LINE CR1 -327 155 109 7 954 387 0 0 0 chr13 48428164 48428207 -71856105 + (TA)n Simple_repeat Simple_repeat 1 43 0 7 954 37 69 0 0 chr13 48428404 48428476 -71855836 + AT_rich Low_complexity Low_complexity 1 72 0 7 954 198 0 0 0 chr13 48428567 48428589 -71855723 + (TA)n Simple_repeat Simple_repeat 1 22 0 7 954 251 307 30 0 chr13 48428724 48428825 -71855487 - L1MA4A LINE L1 -383 5920 5817 7 954 282 292 42 67 chr13 48428913 48429078 -71855234 - L1MA4A LINE L1 -624 5667 5507 7 954 205 80 0 91 chr13 48429129 48429184 -71855128 + T-rich Low_complexity Low_complexity 2 51 0 7 954 1162 56 21 0 chr13 48429186 48429330 -71854982 - B1_Mus1 SINE Alu 0 148 2 7 954 242 286 114 18 chr13 48429956 48430070 -71854242 + MT2B2 LTR ERVL 163 287 -297 7 954 238 283 112 26 chr13 48430343 48430459 -71853853 + MT2B2 LTR ERVL 162 287 -297 7 954 378 281 18 2 chr13 48430486 48430599 -71853713 + PB1D10 SINE Alu 3 118 -2 7 954 23 33 0 0 chr13 48431133 48431163 -71853149 + AT_rich Low_complexity Low_complexity 1 30 0 7 954 186 43 0 0 chr13 48431534 48431557 -71852755 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 7 954 527 222 8 60 chr13 48432088 48432222 -71852090 + ID_B1 SINE B4 91 217 -7 7 954 354 360 140 0 chr13 48433292 48433478 -71850834 - MIR SINE MIR -1 261 50 7 954 658 275 56 23 chr13 48433479 48433695 -71850617 + ID_B1 SINE B4 2 224 0 7 954 32 0 0 0 chr13 48433781 48433813 -71850499 + AT_rich Low_complexity Low_complexity 1 32 0 7 954 180 250 0 55 chr13 48434634 48434689 -71849623 - L2b LINE L2 0 3375 3324 7 954 333 131 0 0 chr13 48435147 48435208 -71849104 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 954 830 298 40 43 chr13 48435278 48435580 -71848732 + MTE2a LTR MaLR 1 301 -78 7 954 260 204 0 0 chr13 48436750 48436794 -71847518 + polypyrimidine Low_complexity Low_complexity 1 44 0 7 954 842 184 0 11 chr13 48436794 48437073 -71847239 + CT-rich Low_complexity Low_complexity 1 275 0 7 954 186 255 0 0 chr13 48437075 48437126 -71847186 + T-rich Low_complexity Low_complexity 4 54 0 7 954 541 277 89 53 chr13 48438328 48438610 -71845702 + B4 SINE B4 1 292 0 7 954 306 0 0 0 chr13 48438625 48438659 -71845653 + (GA)n Simple_repeat Simple_repeat 2 35 0 7 954 296 241 11 92 chr13 48438663 48438750 -71845562 + ID4 SINE ID 4 83 0 7 954 246 254 30 0 chr13 48438987 48439054 -71845258 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 954 24 0 0 0 chr13 48439697 48439721 -71844591 + AT_rich Low_complexity Low_complexity 1 24 0 7 954 685 316 49 68 chr13 48440296 48440666 -71843646 + ORR1D2 LTR MaLR 8 370 0 7 954 217 294 124 29 chr13 48441225 48441330 -71842982 - MER5B DNA MER1_type -7 171 57 7 954 3037 48 9 75 chr13 48441572 48441939 -71842373 + MTA_Mm LTR MaLR 1 346 -50 7 954 1104 78 35 0 chr13 48441939 48442081 -71842231 - B1_Mus2 SINE Alu 0 147 1 7 954 3037 48 9 75 chr13 48442081 48442137 -71842175 + MTA_Mm LTR MaLR 347 396 0 7 954 298 369 60 39 chr13 48442188 48442422 -71841890 - L3 LINE CR1 -702 3787 3549 7 954 730 252 152 13 chr13 48442423 48442660 -71841652 + B4A SINE B4 3 272 -20 7 954 2883 174 17 54 chr13 48442679 48442956 -71841356 + RLTR12A LTR ERVK 1 256 -312 7 954 255 31 0 0 chr13 48442956 48442988 -71841324 + (GA)n Simple_repeat Simple_repeat 1 32 0 7 954 2883 174 17 54 chr13 48442988 48443300 -71841012 + RLTR12A LTR ERVK 257 568 0 7 954 201 196 21 21 chr13 48443320 48443367 -71840945 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 954 407 267 168 16 chr13 48446770 48446960 -71837352 + ID_B1 SINE B4 3 221 -3 7 954 221 0 0 33 chr13 48446966 48446996 -71837316 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 954 521 256 39 39 chr13 48447718 48447848 -71836464 - RSINE1 SINE B4 0 165 36 7 954 1078 75 0 45 chr13 48447978 48448122 -71836190 + B1_Mus1 SINE Alu 1 138 -10 7 954 208 0 62 0 chr13 48448122 48448154 -71836158 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 954 1165 126 17 0 chr13 48448170 48448344 -71835968 + B2_Mm1t SINE B2 3 179 -14 7 954 300 127 0 35 chr13 48448391 48448448 -71835864 + B2_Mm2 SINE B2 47 101 -94 7 954 286 221 0 14 chr13 48448696 48448765 -71835547 - MTEb LTR MaLR -19 360 293 7 954 2034 135 29 11 chr13 48448786 48449137 -71835175 + RLTR15 LTR ERVK 3 359 0 7 954 239 133 0 22 chr13 48450263 48450309 -71834003 + GA-rich Low_complexity Low_complexity 3 47 0 7 954 629 214 113 23 chr13 48450399 48450576 -71833736 + B3 SINE B2 16 208 -8 7 954 217 271 0 0 chr13 48450880 48450928 -71833384 + MIR SINE MIR 51 98 -164 7 954 294 29 0 0 chr13 48451231 48451266 -71833046 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 954 543 202 0 0 chr13 48451297 48451416 -71832896 + (TA)n Simple_repeat Simple_repeat 1 119 0 7 954 819 305 43 7 chr13 48453109 48453390 -71830922 - MLT1F LTR MaLR -205 343 53 7 954 368 133 33 11 chr13 48453928 48453948 -71830364 + polypurine Low_complexity Low_complexity 1 22 0 7 954 267 31 0 0 chr13 48453948 48453980 -71830332 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 954 368 236 17 19 chr13 48453980 48454176 -71830136 + GA-rich Low_complexity Low_complexity 1 195 0 7 954 456 246 59 15 chr13 48455083 48455219 -71829093 + B1F SINE Alu 1 142 -7 7 954 356 224 13 0 chr13 48455234 48455310 -71829002 + ID4 SINE ID 1 77 -6 7 954 1178 271 41 19 chr13 48455817 48456182 -71828130 + MTEa LTR MaLR 1 373 -6 7 954 21 0 0 0 chr13 48456474 48456495 -71827817 + AT_rich Low_complexity Low_complexity 1 21 0 7 954 510 286 63 69 chr13 48456515 48456817 -71827495 + B4 SINE B4 3 276 -16 7 954 398 285 36 0 chr13 48457342 48457479 -71826833 + L1M1 LINE L1 5474 5615 -688 7 954 478 290 153 43 chr13 48457504 48458280 -71826032 - L1MEg LINE L1 -4141 2008 1148 7 954 351 297 0 18 chr13 48458862 48458975 -71825337 + MLT1A1 LTR MaLR 298 408 0 7 954 352 315 13 26 chr13 48459412 48459565 -71824747 - L1MEg LINE L1 -5967 152 2 7 954 257 295 25 13 chr13 48459879 48459958 -71824354 + ID_B1 SINE B4 35 114 -110 7 954 509 171 8 0 chr13 48459979 48460096 -71824216 + GA-rich Low_complexity Low_complexity 2 119 0 7 954 4419 262 23 14 chr13 48460313 48461410 -71822902 + Lx7 LINE L1 6215 7321 -375 7 954 507 143 80 0 chr13 48461417 48461529 -71822783 - RMER1A Other Other -3 1027 907 7 954 933 97 0 0 chr13 48461539 48461673 -71822639 + (GAGAA)n Simple_repeat Simple_repeat 4 137 0 7 954 3754 217 53 6 chr13 48461674 48462471 -71821841 - RMER1A Other Other -196 834 1 7 954 1749 263 38 55 chr13 48462510 48463033 -71821279 - RMER1B Other Other -542 524 11 7 954 189 159 0 0 chr13 48463515 48463559 -71820753 + T-rich Low_complexity Low_complexity 3 46 0 7 954 214 167 24 0 chr13 48463782 48463824 -71820488 + MIR SINE MIR 107 149 -113 7 954 905 205 60 0 chr13 48464363 48464563 -71819749 + B3 SINE B2 1 212 -4 7 954 1443 227 11 50 chr13 48464893 48465269 -71819043 - MTD LTR MaLR -1 418 58 7 954 549 291 0 8 chr13 48466116 48466244 -71818068 + RSINE1 SINE B4 37 163 -2 7 954 24 77 0 0 chr13 48467408 48467460 -71816852 + AT_rich Low_complexity Low_complexity 1 52 0 7 954 471 18 0 0 chr13 48467546 48467602 -71816710 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 954 511 307 52 26 chr13 48467610 48467841 -71816471 - B4A SINE B4 -55 237 1 7 954 518 236 15 61 chr13 48467913 48468044 -71816268 + B1_Mur4 SINE Alu 14 138 -12 7 954 598 25 0 0 chr13 48468044 48468123 -71816189 + B1_Mur4 SINE Alu 72 150 0 7 954 531 0 0 0 chr13 48468155 48468214 -71816098 + (GGAA)n Simple_repeat Simple_repeat 3 61 0 7 954 247 137 0 0 chr13 48468955 48469006 -71815306 - LTR37B LTR ERV1 0 468 418 7 954 693 36 0 0 chr13 48469038 48469122 -71815190 + (GA)n Simple_repeat Simple_repeat 2 85 0 7 954 686 162 241 63 chr13 48469383 48469574 -71814738 + URR1B DNA MER1_type 1 225 0 7 954 236 305 66 25 chr13 48469931 48470052 -71814260 - MLT1G1 LTR MaLR -379 200 75 7 954 787 284 44 101 chr13 48470059 48470506 -71813806 - MTC LTR MaLR -14 407 1 8 954 2382 77 12 58 chr13 48470893 48471236 -71813076 + ORR1A2 LTR MaLR 1 327 0 8 954 399 41 0 0 chr13 48471439 48471488 -71812824 + (GA)n Simple_repeat Simple_repeat 2 50 0 8 954 1044 151 0 0 chr13 48471491 48471670 -71812642 + GA-rich Low_complexity Low_complexity 2 180 0 8 954 211 171 0 0 chr13 48471670 48471700 -71812612 + A-rich Low_complexity Low_complexity 7 36 0 8 954 202 208 18 48 chr13 48472604 48472771 -71811541 + (TATG)n Simple_repeat Simple_repeat 3 164 0 8 954 334 121 54 54 chr13 48472738 48472904 -71811408 + (TATATG)n Simple_repeat Simple_repeat 1 166 0 8 954 313 259 34 28 chr13 48472916 48473095 -71811217 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 8 954 215 280 63 6 chr13 48473122 48473280 -71811032 + (TATATG)n Simple_repeat Simple_repeat 3 169 0 8 954 232 263 18 0 chr13 48473480 48473537 -71810775 - RSINE1 SINE B4 -26 139 82 8 954 384 196 43 11 chr13 48473583 48473676 -71810636 - B4A SINE B4 -63 229 134 8 954 409 305 17 0 chr13 48473871 48473989 -71810323 - B4A SINE B4 -168 124 5 8 954 225 339 57 33 chr13 48474083 48474205 -71810107 - MIR SINE MIR -19 243 119 8 954 1166 241 80 8 chr13 48474792 48475195 -71809117 + Lx3C LINE L1 6188 6972 -4 8 954 21 36 0 0 chr13 48475220 48475248 -71809064 + AT_rich Low_complexity Low_complexity 1 28 0 8 954 728 267 36 36 chr13 48475377 48475602 -71808710 + B4A SINE B4 66 290 -2 8 954 280 232 14 0 chr13 48475779 48475848 -71808464 + PB1D10 SINE Alu 40 109 -8 8 954 338 301 18 15 chr13 48477001 48477138 -71807174 + MTEb LTR MaLR 220 372 -7 8 954 434 219 0 17 chr13 48477642 48477758 -71806554 + (TATATG)n Simple_repeat Simple_repeat 6 119 0 8 954 304 291 0 0 chr13 48477769 48477848 -71806464 + (TATG)n Simple_repeat Simple_repeat 3 81 0 8 954 381 210 0 21 chr13 48478383 48478524 -71805788 + (CATA)n Simple_repeat Simple_repeat 4 141 0 8 954 211 297 14 0 chr13 48478548 48478622 -71805690 + (CATA)n Simple_repeat Simple_repeat 1 75 0 8 954 1224 192 44 11 chr13 48481294 48481568 -71802744 - MTD LTR MaLR -134 285 3 8 954 194 62 0 30 chr13 48481677 48481710 -71802602 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 954 916 218 69 10 chr13 48482726 48482930 -71801382 + B3 SINE B2 1 216 0 8 954 23 54 0 0 chr13 48482932 48482969 -71801343 + AT_rich Low_complexity Low_complexity 1 37 0 8 954 216 0 0 0 chr13 48482970 48482994 -71801318 + (TG)n Simple_repeat Simple_repeat 2 25 0 8 954 510 250 31 0 chr13 48483013 48483141 -71801171 - RSINE1 SINE B4 -31 134 3 8 954 498 171 0 0 chr13 48483380 48483462 -71800850 - Lx7 LINE L1 -250 7446 7365 8 954 440 129 19 19 chr13 48483475 48483578 -71800734 + (TA)n Simple_repeat Simple_repeat 2 104 0 8 954 242 148 262 0 chr13 48483599 48483660 -71800652 - Lx7 LINE L1 -329 7367 7291 8 954 505 286 7 20 chr13 48483816 48483966 -71800346 - RSINE1 SINE B4 -12 153 6 8 954 36 23 0 0 chr13 48484151 48484194 -71800118 + AT_rich Low_complexity Low_complexity 1 43 0 8 954 369 114 14 41 chr13 48484461 48484534 -71799778 - B1_Mus2 SINE Alu 0 147 77 8 954 622 252 7 0 chr13 48485330 48485473 -71798839 + B1F SINE Alu 5 148 -1 8 954 27 0 0 0 chr13 48485874 48485901 -71798411 + AT_rich Low_complexity Low_complexity 1 27 0 8 954 211 192 26 40 chr13 48487028 48487104 -71797208 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 8 954 345 177 0 0 chr13 48487272 48487351 -71796961 + (TGAA)n Simple_repeat Simple_repeat 3 81 0 8 954 591 110 419 20 chr13 48487656 48487804 -71796508 + B3 SINE B2 4 210 -6 8 954 189 0 0 0 chr13 48487821 48487842 -71796470 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 8 954 963 207 127 41 chr13 48488419 48488686 -71795626 + B4A SINE B4 1 290 -2 8 954 408 375 123 21 chr13 48489149 48489571 -71794741 + MLT1F2 LTR MaLR 11 475 -85 8 954 302 198 133 44 chr13 48489578 48489668 -71794644 - B1F SINE Alu -16 133 36 8 954 288 0 0 0 chr13 48489668 48489700 -71794612 + (A)n Simple_repeat Simple_repeat 1 32 0 8 954 369 212 0 154 chr13 48489890 48490007 -71794305 + ID_B1 SINE B4 109 207 -17 8 954 543 16 0 0 chr13 48491564 48491628 -71792684 + (TG)n Simple_repeat Simple_repeat 1 64 0 8 954 758 265 51 43 chr13 48491735 48492011 -71792301 - B4A SINE B4 -14 278 1 8 954 278 221 111 44 chr13 48492089 48492179 -71792133 - MER53 DNA hAT -97 96 1 8 954 746 260 74 109 chr13 48492181 48492574 -71791738 + MTEa LTR MaLR 1 379 0 8 954 539 267 116 0 chr13 48492864 48493010 -71791302 + B4 SINE B4 122 284 -8 8 954 224 213 0 16 chr13 48493545 48493607 -71790705 + CT-rich Low_complexity Low_complexity 2 62 0 8 954 229 250 66 0 chr13 48493997 48494073 -71790239 + RMER15 LTR ERVL 61 141 -434 8 954 664 298 72 38 chr13 48494095 48494388 -71789924 + RMER15 LTR ERVL 273 575 0 8 954 212 256 0 0 chr13 48494626 48494669 -71789643 + L3 LINE CR1 4211 4253 -236 8 954 1666 128 22 60 chr13 48495352 48495668 -71788644 + ORR1A4 LTR MaLR 18 321 -8 8 954 728 298 64 20 chr13 48496092 48496342 -71787970 + B4A SINE B4 1 261 -31 8 955 219 203 0 0 chr13 48497707 48497766 -71786546 + CT-rich Low_complexity Low_complexity 2 60 0 8 955 1876 284 90 30 chr13 48498749 48499537 -71784775 + L1MB3 LINE L1 5325 6159 -24 8 955 195 125 0 0 chr13 48499594 48499634 -71784678 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 8 955 727 231 89 16 chr13 48499692 48499986 -71784326 + MTE2b LTR MaLR 3 363 -16 8 955 796 121 6 35 chr13 48500245 48500417 -71783895 + CT-rich Low_complexity Low_complexity 1 167 0 1 955 467 301 31 153 chr13 48501805 48502060 -71782252 + MLT1J1 LTR MaLR 195 418 -26 2 955 758 260 67 124 chr13 48502097 48502453 -71781859 + ORR1E LTR MaLR 7 342 -17 3 955 415 340 77 36 chr13 48502509 48502729 -71781583 + Arthur1B DNA Tip100 42 270 -955 4 955 2814 136 7 2 chr13 48502786 48503205 -71781107 - MTC LTR MaLR 0 421 1 5 955 6606 156 44 31 chr13 48503205 48504446 -71779866 - MTC-int LTR MaLR 0 1258 1 5 955 2365 165 19 12 chr13 48504446 48504864 -71779448 - MTC LTR MaLR 0 421 1 5 955 341 301 160 95 chr13 48505043 48505525 -71778787 + Arthur1B DNA Tip100 594 1106 -119 4 955 981 59 7 6 chr13 48505554 48505688 -71778624 - B1_Mus2 SINE Alu -2 145 19 6 955 1330 80 11 0 chr13 48505694 48505870 -71778442 + B2_Mm1t SINE B2 2 179 -14 7 955 744 258 58 34 chr13 48505892 48506097 -71778215 + B3 SINE B2 7 216 0 8 955 239 0 0 31 chr13 48506167 48506199 -71778113 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 955 846 194 0 7 chr13 48506199 48506334 -71777978 - B1_Mur2 SINE Alu -10 139 5 1 955 603 273 33 81 chr13 48506396 48506607 -71777705 - ORR1E LTR MaLR 0 359 159 1 955 1918 155 33 9 chr13 48506617 48506949 -71777363 + RMER4A LTR ERVK 17 356 -110 1 955 518 125 159 0 chr13 48506935 48507023 -71777289 + RMER4A LTR ERVK 484 585 0 1 955 615 335 16 0 chr13 48507023 48507181 -71777131 - ORR1E LTR MaLR -193 166 6 1 955 204 216 0 0 chr13 48507642 48507679 -71776633 + (CAGA)n Simple_repeat Simple_repeat 3 39 0 1 955 236 306 220 20 chr13 48508102 48508252 -71776060 - MIR SINE MIR -70 192 13 1 955 225 0 0 0 chr13 48508375 48508400 -71775912 + (T)n Simple_repeat Simple_repeat 1 25 0 1 955 332 283 68 61 chr13 48508512 48508659 -71775653 + MLT1B LTR MaLR 107 254 -136 1 955 605 49 12 0 chr13 48508669 48508750 -71775562 + (GA)n Simple_repeat Simple_repeat 2 83 0 1 955 1740 164 31 0 chr13 48508752 48509045 -71775267 + ORR1D1-int LTR MaLR 1069 1370 0 1 955 982 192 0 22 chr13 48509046 48509227 -71775085 + ORR1D1 LTR MaLR 5 181 -193 1 955 890 180 0 6 chr13 48509227 48509391 -71774921 + CT-rich Low_complexity Low_complexity 15 178 0 1 955 1116 133 0 0 chr13 48509391 48509571 -71774741 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 955 890 180 0 6 chr13 48509571 48509585 -71774727 + polypyrimidine Low_complexity Low_complexity 1 14 0 2 955 275 254 0 15 chr13 48509586 48509654 -71774658 + C-rich Low_complexity Low_complexity 6 72 0 2 955 861 170 135 30 chr13 48509654 48509854 -71774458 + ORR1D1 LTR MaLR 154 374 0 1 955 524 247 5 120 chr13 48509866 48510050 -71774262 - RSINE1 SINE B4 0 165 3 2 955 252 289 13 0 chr13 48511454 48511530 -71772782 - MIR3 SINE MIR -47 161 85 2 955 666 250 58 48 chr13 48511719 48511896 -71772416 + B3A SINE B2 1 179 -19 2 955 387 0 0 0 chr13 48511896 48511939 -71772373 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 955 666 250 58 48 chr13 48511939 48511950 -71772362 + B3A SINE B2 180 190 -8 2 955 207 0 0 0 chr13 48512193 48512216 -71772096 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 955 1043 68 0 29 chr13 48512217 48512353 -71771959 - B1_Mus1 SINE Alu -12 136 5 2 955 708 84 0 8 chr13 48512363 48512483 -71771829 - L1_Mus4 LINE L1 -26 6610 6492 2 955 3786 86 0 4 chr13 48512478 48512969 -71771343 + L1_Mus4 LINE L1 6014 6502 -134 2 955 239 267 39 39 chr13 48513228 48513306 -71771006 - ID4 SINE ID -5 78 1 3 955 267 250 186 23 chr13 48513319 48513405 -71770907 - B1F1 SINE Alu -38 111 12 3 955 198 385 32 8 chr13 48513414 48513537 -71770775 + MIR SINE MIR 53 178 -84 3 955 6675 86 14 5 chr13 48513957 48515236 -71769076 + L1VL2 LINE L1 95 1384 -2231 3 955 243 254 72 29 chr13 48515238 48515253 -71769059 + ORR1B1-int LTR MaLR 611 749 -755 3 955 436 208 0 102 chr13 48515253 48515270 -71769042 + MT2B LTR ERVL 152 156 -445 3 955 680 132 9 0 chr13 48515270 48515376 -71768936 + B1_Mm SINE Alu 1 107 -40 3 955 4057 185 205 11 chr13 48515385 48516327 -71767985 + ORR1B1-int LTR MaLR 384 1508 -1 3 955 395 234 64 86 chr13 48516364 48516489 -71767823 + B4A SINE B4 96 215 -77 3 955 1097 102 6 0 chr13 48516489 48516655 -71767657 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 3 955 395 234 64 86 chr13 48516655 48516669 -71767643 + B4A SINE B4 216 231 -61 3 955 274 291 183 21 chr13 48516663 48516680 -71767632 + MLT1B LTR MaLR 261 277 -228 4 955 732 54 0 0 chr13 48516680 48516773 -71767539 + (GGAGA)n Simple_repeat Simple_repeat 4 96 0 4 955 412 294 173 23 chr13 48516773 48516956 -71767356 + MLT1B LTR MaLR 234 475 -30 4 955 400 252 7 7 chr13 48517284 48517595 -71766717 + (TG)n Simple_repeat Simple_repeat 1 311 0 4 955 602 60 12 0 chr13 48517843 48517926 -71766386 + (GGGGA)n Simple_repeat Simple_repeat 1 84 0 4 955 3510 28 0 5 chr13 48519289 48519691 -71764621 - MTB LTR MaLR 0 400 1 4 955 459 270 93 21 chr13 48519801 48519941 -71764371 - RSINE1 SINE B4 -13 152 3 4 955 335 312 44 18 chr13 48520027 48520141 -71764171 - ID_B1 SINE B4 0 224 108 4 955 519 101 0 0 chr13 48520213 48520292 -71764020 + (TG)n Simple_repeat Simple_repeat 2 80 0 4 955 234 0 0 0 chr13 48520339 48520365 -71763947 + (TCC)n Simple_repeat Simple_repeat 2 27 0 4 955 1010 107 6 0 chr13 48520365 48520524 -71763788 + (TC)n Simple_repeat Simple_repeat 2 161 0 4 955 369 62 0 0 chr13 48520660 48520708 -71763604 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 955 246 273 26 13 chr13 48520817 48520895 -71763417 + MTD LTR MaLR 333 411 -8 5 955 554 257 58 19 chr13 48521204 48521359 -71762953 + ORR1E LTR MaLR 140 300 -59 5 955 294 29 0 0 chr13 48522021 48522056 -71762256 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 955 216 0 0 0 chr13 48522849 48522873 -71761439 + (TGG)n Simple_repeat Simple_repeat 1 24 0 5 955 306 73 0 0 chr13 48522874 48522915 -71761397 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 955 393 225 31 132 chr13 48523408 48523567 -71760745 + B1_Mur1 SINE Alu 5 147 -2 5 955 723 268 15 59 chr13 48523627 48523829 -71760483 + B3A SINE B2 6 198 0 5 955 257 256 34 124 chr13 48525816 48525905 -71758407 + ID4 SINE ID 2 82 -1 5 955 22 0 0 0 chr13 48526611 48526633 -71757679 + AT_rich Low_complexity Low_complexity 1 22 0 5 955 601 337 17 11 chr13 48526732 48526912 -71757400 + B4 SINE B4 112 292 0 6 955 211 306 0 14 chr13 48527463 48527536 -71756776 + L2a LINE L2 3036 3107 -280 6 955 310 352 12 3 chr13 48527621 48527732 -71756580 + L2a LINE L2 3244 3405 -21 6 955 28 0 0 0 chr13 48527773 48527801 -71756511 + AT_rich Low_complexity Low_complexity 1 28 0 6 955 264 265 51 18 chr13 48527840 48527957 -71756355 + MIRc SINE MIR 14 143 -133 6 955 584 195 25 0 chr13 48527957 48528116 -71756196 + (TG)n Simple_repeat Simple_repeat 1 163 0 6 955 714 223 253 0 chr13 48528116 48528349 -71755963 - B4A SINE B4 0 292 1 6 955 561 309 72 10 chr13 48528559 48528768 -71755544 + B4A SINE B4 56 277 -15 6 955 249 356 83 9 chr13 48529016 48529234 -71755078 + L1ME3A LINE L1 5912 6145 -28 6 955 785 148 6 3 chr13 48529235 48529575 -71754737 + (TG)n Simple_repeat Simple_repeat 1 341 0 6 955 392 280 69 93 chr13 48530008 48530223 -71754089 + MLT1A0 LTR MaLR 4 211 -163 6 955 679 248 102 0 chr13 48530875 48531012 -71753300 + RSINE1 SINE B4 9 159 -6 7 955 289 126 30 40 chr13 48531096 48531195 -71753117 + (CA)n Simple_repeat Simple_repeat 2 99 0 7 955 248 217 29 14 chr13 48531212 48531282 -71753030 - ID4 SINE ID -10 73 3 7 955 1072 218 40 44 chr13 48531392 48531642 -71752670 + B4 SINE B4 1 249 -43 7 955 1511 193 115 59 chr13 48532864 48533238 -71751074 + MTD LTR MaLR 12 406 -13 7 955 739 303 94 8 chr13 48533447 48533713 -71750599 - MER2 DNA MER2_type -47 298 10 7 955 339 25 0 0 chr13 48534090 48534130 -71750182 + (TTG)n Simple_repeat Simple_repeat 2 41 0 7 955 444 19 0 0 chr13 48534239 48534292 -71750020 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 955 418 231 9 96 chr13 48534591 48534706 -71749606 + PB1D10 SINE Alu 1 105 -12 7 955 198 0 0 0 chr13 48534720 48534742 -71749570 + (CA)n Simple_repeat Simple_repeat 1 22 0 7 955 393 235 43 57 chr13 48534828 48534902 -71749410 - L1MB4 LINE L1 -9 6174 6101 8 955 1377 94 16 0 chr13 48534902 48535093 -71749219 - B2_Mm2 SINE B2 -1 194 1 8 955 393 235 43 57 chr13 48535093 48535158 -71749154 - L1MB4 LINE L1 -83 6100 6037 8 955 319 347 63 50 chr13 48535161 48535528 -71748784 - ORR1E LTR MaLR -6 368 1 8 955 620 302 85 37 chr13 48535557 48536015 -71748297 - L1MB4 LINE L1 -180 6000 5521 8 955 248 357 71 0 chr13 48536108 48536220 -71748092 - RSINE1 SINE B4 -2 163 44 8 955 277 238 0 73 chr13 48536319 48536387 -71747925 - L1MB4 LINE L1 -697 5474 5412 8 955 310 368 39 7 chr13 48537702 48537855 -71746457 + MLT1E LTR MaLR 449 606 -47 8 955 220 200 36 18 chr13 48538003 48538059 -71746253 - MIRc SINE MIR -147 121 65 8 955 1018 211 95 66 chr13 48538077 48538381 -71745931 + MTEa LTR MaLR 3 315 -64 8 955 376 156 47 0 chr13 48538382 48538446 -71745866 - ORR1D1 LTR MaLR -34 340 274 8 955 507 217 0 0 chr13 48538561 48538718 -71745594 + (TG)n Simple_repeat Simple_repeat 1 157 0 8 955 696 191 0 0 chr13 48538758 48539108 -71745204 + (TG)n Simple_repeat Simple_repeat 1 350 0 8 955 411 225 0 0 chr13 48539127 48539265 -71745047 + (TG)n Simple_repeat Simple_repeat 1 138 0 8 955 438 20 0 0 chr13 48539811 48539862 -71744450 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 955 329 321 93 62 chr13 48540022 48540290 -71744022 + MLT1C LTR MaLR 36 333 -134 9 955 336 306 173 27 chr13 48540301 48540486 -71743826 + MLT1B LTR MaLR 94 305 -85 9 955 646 231 18 67 chr13 48540533 48540704 -71743608 - ID_B1 SINE B4 -41 251 81 9 955 232 232 82 35 chr13 48541107 48541192 -71743120 - MER5A DNA MER1_type -84 105 17 9 955 182 211 16 66 chr13 48541292 48541353 -71742959 - L2 LINE L2 -540 2879 2822 9 955 234 0 0 0 chr13 48541792 48541818 -71742494 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 9 955 626 228 166 0 chr13 48541851 48541996 -71742316 + MTEb LTR MaLR 1 169 -210 9 955 612 245 86 7 chr13 48542007 48542159 -71742153 + RSINE1 SINE B4 2 165 0 9 955 411 311 133 62 chr13 48542432 48542471 -71741841 + MLT1A0 LTR MaLR 1 53 -312 9 955 387 0 0 0 chr13 48542471 48542514 -71741798 + (CA)n Simple_repeat Simple_repeat 1 43 0 9 955 411 311 133 62 chr13 48542514 48542813 -71741499 + MLT1A0 LTR MaLR 54 363 -2 9 955 529 190 87 29 chr13 48542848 48542951 -71741361 + ID_B1 SINE B4 79 187 -37 1 955 378 293 89 28 chr13 48543010 48543189 -71741123 + MIRb SINE MIR 70 259 -9 1 955 686 245 111 52 chr13 48544229 48544500 -71739812 + B4A SINE B4 6 292 0 1 955 230 247 13 27 chr13 48544505 48544580 -71739732 + (CA)n Simple_repeat Simple_repeat 2 75 0 1 955 490 166 53 0 chr13 48544580 48544749 -71739563 + (CATA)n Simple_repeat Simple_repeat 1 178 0 1 955 386 172 34 34 chr13 48544767 48544942 -71739370 + (CATA)n Simple_repeat Simple_repeat 4 178 0 1 955 218 254 363 7 chr13 48545494 48545629 -71738683 - MIRb SINE MIR -18 250 68 1 955 355 319 56 25 chr13 48545758 48545919 -71738393 - MLT1G1 LTR MaLR -27 552 387 1 955 250 226 184 35 chr13 48546598 48546685 -71737627 + MLT1G3 LTR MaLR 205 304 -291 1 955 2123 104 0 43 chr13 48546735 48547133 -71737179 + ORR1A2 LTR MaLR 1 338 -8 1 955 282 239 0 18 chr13 48548412 48548502 -71735810 + L1M5 LINE L1 5480 5566 -734 1 955 310 324 64 73 chr13 48548546 48548766 -71735546 + MLT2B3 LTR ERVL 20 237 -317 1 955 1442 262 20 17 chr13 48548579 48548925 -71735387 + MTE2b LTR MaLR 29 375 -4 1 955 24 77 0 0 chr13 48549853 48549905 -71734407 + AT_rich Low_complexity Low_complexity 1 52 0 1 955 315 0 0 0 chr13 48549951 48549986 -71734326 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 955 405 0 0 0 chr13 48549986 48550030 -71734282 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 955 785 203 7 7 chr13 48550030 48550169 -71734143 - B1F SINE Alu -10 139 1 1 955 207 354 37 0 chr13 48550355 48550437 -71733875 - MIRc SINE MIR -112 156 72 1 955 224 149 0 21 chr13 48550826 48550874 -71733438 + CT-rich Low_complexity Low_complexity 1 47 0 1 955 271 356 80 55 chr13 48552100 48552299 -71732013 + MIRb SINE MIR 4 207 -61 1 955 567 29 0 0 chr13 48552336 48552405 -71731907 + (TC)n Simple_repeat Simple_repeat 1 69 0 1 955 957 174 152 10 chr13 48552855 48553053 -71731259 - URR1A DNA MER1_type 0 226 1 1 955 311 203 17 0 chr13 48553198 48553257 -71731055 + L1MC4a LINE L1 6599 6658 -1224 1 955 290 278 35 106 chr13 48553258 48553399 -71730913 - RMER12 LTR ERVK -471 851 721 1 955 361 298 195 6 chr13 48553935 48554094 -71730218 - MamGypLTR1a LTR Gypsy -39 745 557 1 955 677 123 18 0 chr13 48554421 48554535 -71729777 + (TTTC)n Simple_repeat Simple_repeat 2 117 0 1 955 1135 278 35 140 chr13 48554677 48555099 -71729213 + MTE2a LTR MaLR 1 378 -1 1 955 501 180 0 0 chr13 48557498 48557626 -71726686 + (TG)n Simple_repeat Simple_repeat 2 129 0 1 955 318 109 18 35 chr13 48557626 48557683 -71726629 - HAL1-3A_ME LINE L1 -828 2030 1975 1 955 289 258 129 0 chr13 48557839 48557932 -71726380 + PB1D10 SINE Alu 7 111 -6 1 955 439 282 8 0 chr13 48558011 48558135 -71726177 - L1MA5 LINE L1 0 6300 6176 1 955 821 239 38 38 chr13 48558272 48558481 -71725831 - B3 SINE B2 -4 212 4 1 955 350 238 260 12 chr13 48558815 48558988 -71725324 + B4A SINE B4 1 216 -76 1 955 593 122 208 42 chr13 48559086 48559206 -71725106 + B1_Mus2 SINE Alu 2 141 -6 1 955 327 162 0 0 chr13 48559264 48559344 -71724968 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 955 198 0 0 0 chr13 48560078 48560100 -71724212 + (A)n Simple_repeat Simple_repeat 1 22 0 1 955 322 227 38 0 chr13 48560253 48560357 -71723955 - PB1D10 SINE Alu 0 120 1 1 955 597 14 0 0 chr13 48561977 48562047 -71722265 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 955 746 67 0 9 chr13 48562748 48562854 -71721458 + (GAAA)n Simple_repeat Simple_repeat 4 108 0 1 955 774 319 43 0 chr13 48563208 48563465 -71720847 + MER2 DNA MER2_type 2 269 -76 1 955 1921 128 2 89 chr13 48564236 48564629 -71719683 + ORR1B2 LTR MaLR 1 359 -8 1 955 1656 125 117 44 chr13 48564633 48564993 -71719319 + ORR1B2-int LTR MaLR 1 386 -1123 1 955 2923 213 91 50 chr13 48565023 48565129 -71719183 + ORR1B2-int LTR MaLR 521 631 -739 1 955 695 165 50 14 chr13 48565129 48565270 -71719042 + B1_Mus2 SINE Alu 2 147 0 1 955 3548 160 39 30 chr13 48565270 48565789 -71718523 + ORR1B2-int LTR MaLR 793 1320 -189 1 955 1391 78 10 30 chr13 48565789 48565986 -71718326 - B2_Mm2 SINE B2 -1 194 2 1 955 3548 160 39 30 chr13 48565986 48566176 -71718136 + ORR1B2-int LTR MaLR 1321 1509 0 1 955 1471 135 62 81 chr13 48566180 48566503 -71717809 + ORR1B2 LTR MaLR 20 336 -31 1 955 396 0 0 0 chr13 48566505 48566549 -71717763 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 955 250 209 256 0 chr13 48566866 48566952 -71717360 + MLT1F1 LTR MaLR 348 455 -114 1 955 660 153 76 55 chr13 48566983 48567128 -71717184 - B1_Mur2 SINE Alu 0 149 2 1 955 696 246 98 0 chr13 48567275 48567490 -71716822 - MER2 DNA MER2_type -28 317 82 1 955 514 295 88 55 chr13 48567570 48567914 -71716398 + ORR1E LTR MaLR 8 379 0 1 955 456 254 24 24 chr13 48568565 48568690 -71715622 + B4A SINE B4 1 125 -167 1 955 367 233 38 24 chr13 48568709 48568838 -71715474 + L1M2 LINE L1 3420 3554 -2592 1 955 298 267 0 0 chr13 48568846 48568906 -71715406 - B1F2 SINE Alu -89 60 1 1 955 7466 38 15 4 chr13 48569177 48570108 -71714204 + MusHAL1 LINE L1 1768 2708 -4 1 955 225 188 42 0 chr13 48570128 48570176 -71714136 + L1MD3 LINE L1 7240 7289 -706 1 955 277 193 0 0 chr13 48570446 48570503 -71713809 + L1MA6 LINE L1 5937 5993 -307 1 955 318 148 0 0 chr13 48570685 48570739 -71713573 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 955 3838 30 5 0 chr13 48570829 48571263 -71713049 + RLTR10C LTR ERVK 1 436 0 1 955 300 348 22 22 chr13 48571264 48571399 -71712913 + MLT1F1 LTR MaLR 16 150 -419 1 955 2457 127 30 10 chr13 48571417 48571823 -71712489 + MTC LTR MaLR 1 414 -7 1 955 401 263 202 42 chr13 48571835 48572097 -71712215 - L1MC4 LINE L1 -1054 6988 6685 1 955 735 281 68 56 chr13 48572565 48572957 -71711355 - L1MA4 LINE L1 -365 5935 5430 1 955 1422 92 0 15 chr13 48572957 48573155 -71711157 - B2_Mm2 SINE B2 0 195 1 1 955 735 302 139 34 chr13 48573155 48573258 -71711054 - L1MA4 LINE L1 -418 5429 5328 1 955 3195 289 83 40 chr13 48575166 48577126 -71707186 - L1M2 LINE L1 -1087 5056 3013 1 955 471 299 20 20 chr13 48577127 48577274 -71707038 - RSINE1 SINE B4 0 165 19 1 955 347 282 69 53 chr13 48577274 48577405 -71706907 - L1M2 LINE L1 -3093 3047 2915 1 955 266 50 25 0 chr13 48577754 48577794 -71706518 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 955 346 232 12 12 chr13 48578072 48578155 -71706157 + ID4_ SINE ID 1 83 0 1 955 201 158 0 0 chr13 48578468 48578506 -71705806 + A-rich Low_complexity Low_complexity 1 38 0 1 955 253 279 4 35 chr13 48578533 48578618 -71705694 + B3A SINE B2 10 91 -107 1 955 559 87 9 9 chr13 48578668 48578773 -71705539 + (GA)n Simple_repeat Simple_repeat 2 106 0 1 955 2100 261 248 28 chr13 48578808 48579813 -71704499 + Lx8 LINE L1 6102 7327 -146 1 955 1139 219 125 15 chr13 48579813 48580142 -71704170 + ORR1D2 LTR MaLR 1 365 -5 1 955 762 172 20 14 chr13 48580927 48581074 -71703238 + B1_Mur4 SINE Alu 2 149 -1 1 955 231 235 57 29 chr13 48581634 48581704 -71702608 + MLT1B LTR MaLR 132 203 -264 1 955 502 237 60 15 chr13 48581686 48581819 -71702493 + ID_B1 SINE B4 86 224 0 1 955 300 247 72 0 chr13 48581904 48582001 -71702311 + MLT-int LTR MaLR 5 108 -1627 1 955 1708 128 292 3 chr13 48582066 48582350 -71701962 + RMER4A LTR ERVK 1 342 -124 1 955 626 58 11 0 chr13 48582350 48582437 -71701875 + (TC)n Simple_repeat Simple_repeat 1 88 0 1 955 1708 128 292 3 chr13 48582437 48582512 -71701800 + RMER4A LTR ERVK 343 462 -4 1 955 488 196 54 61 chr13 48582517 48582664 -71701648 + RMER4A LTR ERVK 321 466 0 1 955 277 243 0 0 chr13 48582666 48582736 -71701576 + MLT1B-int LTR MaLR 346 415 -956 1 955 232 260 182 0 chr13 48582784 48582861 -71701451 - RSINE1 SINE B4 -31 134 44 1 955 368 269 127 97 chr13 48582917 48583176 -71701136 + MLT1B-int LTR MaLR 436 702 -669 1 955 553 162 18 26 chr13 48583322 48583436 -71700876 + B1_Mm SINE Alu 15 127 -20 1 955 418 218 0 53 chr13 48583436 48583625 -71700687 + A-rich Low_complexity Low_complexity 2 180 0 1 955 830 299 137 37 chr13 48583735 48584083 -71700229 + MLT1B-int LTR MaLR 956 1428 -61 1 955 303 294 147 33 chr13 48584115 48584414 -71699898 + MLT1B LTR MaLR 58 390 0 1 955 260 319 8 8 chr13 48584897 48585014 -71699298 - MMSAT4 Satellite Satellite -21 147 31 1 955 225 370 22 0 chr13 48585640 48585778 -71698534 - MMSAT4 Satellite Satellite -5 163 23 1 955 284 263 0 0 chr13 48587521 48587578 -71696734 + ID4_ SINE ID 15 71 -12 1 955 258 303 48 48 chr13 48587926 48588030 -71696282 + MLT2B4 LTR ERVL 122 225 -331 1 955 254 280 90 78 chr13 48588090 48588258 -71696054 + MLT2B4 LTR ERVL 373 541 -13 1 955 250 226 200 21 chr13 48588299 48588394 -71695918 + MLT1-int LTR MaLR 44 155 -1216 1 955 201 175 0 0 chr13 48588569 48588609 -71695703 + G-rich Low_complexity Low_complexity 1 40 0 1 955 942 269 36 63 chr13 48588697 48589030 -71695282 - L1M2 LINE L1 -529 5660 5337 1 955 245 375 27 40 chr13 48589222 48589372 -71694940 + MLT-int LTR MaLR 1252 1399 -336 1 955 1054 88 0 52 chr13 48589595 48589750 -71694562 - B1_Mus1 SINE Alu 0 148 2 1 955 276 30 0 0 chr13 48589933 48589966 -71694346 + (TGG)n Simple_repeat Simple_repeat 3 35 0 1 955 712 277 183 35 chr13 48590041 48590591 -71693721 - L1MDa LINE L1 -4580 2053 1403 1 955 487 230 26 34 chr13 48590591 48590708 -71693604 + PB1D9 SINE Alu 4 119 -1 1 955 712 243 101 80 chr13 48590708 48590848 -71693464 - L1MDa LINE L1 -5231 1402 1251 1 955 258 200 62 0 chr13 48590853 48590933 -71693379 + (TTTA)n Simple_repeat Simple_repeat 4 88 0 1 955 265 136 0 63 chr13 48590978 48591041 -71693271 - L1MDa LINE L1 -5255 1285 1227 1 955 243 234 0 0 chr13 48591049 48591096 -71693216 - BC1_Mm scRNA scRNA -86 66 20 1 955 257 250 141 8 chr13 48591100 48591221 -71693091 - B1F SINE Alu -8 141 5 1 955 428 165 53 32 chr13 48591282 48591376 -71692936 - L1MDa LINE L1 -5411 1129 1034 1 955 1436 63 21 10 chr13 48591392 48591584 -71692728 + B2_Mm2 SINE B2 2 195 0 1 955 357 293 94 20 chr13 48591630 48591832 -71692480 + L1ME1 LINE L1 5755 5971 -208 1 955 816 239 110 16 chr13 48591836 48592091 -71692221 + Lx8 LINE L1 7186 7464 -9 1 955 30 45 0 0 chr13 48592095 48592139 -71692173 + AT_rich Low_complexity Low_complexity 1 44 0 1 955 22 0 0 0 chr13 48592405 48592427 -71691885 + AT_rich Low_complexity Low_complexity 1 22 0 1 955 592 257 0 34 chr13 48592427 48592576 -71691736 + B1_Mur1 SINE Alu 5 148 -1 1 955 339 333 0 0 chr13 48594141 48594270 -71690042 - MurSatRep1 Unknown Unknown -1391 746 618 2 955 286 253 27 0 chr13 48594537 48594612 -71689700 - L1M4b LINE L1 -1376 5630 5554 2 955 251 316 42 10 chr13 48594631 48594727 -71689585 - PB1D10 SINE Alu -18 99 1 2 955 408 266 11 90 chr13 48594739 48594863 -71689449 - L1M4b LINE L1 -1452 5554 5443 2 955 2293 155 66 5 chr13 48594863 48595259 -71689053 - MTC LTR MaLR -1 420 1 2 955 408 266 11 90 chr13 48595259 48595312 -71689000 - L1M4b LINE L1 -1564 5442 5392 2 955 531 0 0 0 chr13 48595322 48595381 -71688931 + (TG)n Simple_repeat Simple_repeat 1 59 0 2 955 401 115 0 13 chr13 48595383 48595462 -71688850 + (GA)n Simple_repeat Simple_repeat 2 79 0 2 955 714 256 92 17 chr13 48595632 48595870 -71688442 - L1M4b LINE L1 -1854 5152 4897 2 955 396 193 15 125 chr13 48595914 48595934 -71688378 + MT2B LTR ERVL 148 152 -449 2 955 811 158 14 14 chr13 48595934 48596082 -71688230 + B1_Mur3 SINE Alu 1 148 -1 2 955 309 299 131 18 chr13 48596199 48596420 -71687892 + L1MB3 LINE L1 5658 5903 -277 2 955 3461 25 5 0 chr13 48596449 48596843 -71687469 - MTA_Mm LTR MaLR 0 396 1 2 955 343 211 54 22 chr13 48596843 48596928 -71687384 + L1MB3 LINE L1 6068 6157 -26 2 955 432 260 59 11 chr13 48597017 48597163 -71687149 - L1M4b LINE L1 -2472 4534 4347 2 955 236 303 95 36 chr13 48597614 48597751 -71686561 - MLT1A1 LTR MaLR -124 284 140 2 955 387 279 239 38 chr13 48597941 48598447 -71685865 - L1M4b LINE L1 -5159 2175 1568 2 955 388 297 74 82 chr13 48598746 48598797 -71685515 + L1MB7 LINE L1 5919 5973 -211 2 955 1959 187 8 55 chr13 48598797 48599194 -71685118 - ORR1C1 LTR MaLR 0 378 1 2 955 388 297 74 82 chr13 48599194 48599373 -71684939 + L1MB7 LINE L1 5974 6147 -37 2 955 810 183 183 0 chr13 48599373 48599553 -71684759 - B3 SINE B2 -3 213 1 2 955 277 145 16 16 chr13 48599793 48599856 -71684456 + (TA)n Simple_repeat Simple_repeat 1 63 0 2 955 363 23 0 0 chr13 48599856 48599900 -71684412 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 955 869 247 0 0 chr13 48600045 48600219 -71684093 - B4 SINE B4 -25 267 94 2 955 746 215 41 7 chr13 48600276 48600421 -71683891 - RSINE1 SINE B4 -14 151 2 2 955 234 150 0 0 chr13 48600428 48600468 -71683844 + (TATATG)n Simple_repeat Simple_repeat 4 43 0 2 955 516 272 52 42 chr13 48600475 48600636 -71683676 - B3A SINE B2 0 198 37 2 955 856 175 0 34 chr13 48600636 48600784 -71683528 - B1_Mus2 SINE Alu -2 145 3 2 955 516 272 52 42 chr13 48600784 48600814 -71683498 - B3A SINE B2 -162 36 6 2 955 22 0 0 0 chr13 48600831 48600853 -71683459 + AT_rich Low_complexity Low_complexity 1 22 0 2 955 227 316 0 71 chr13 48600853 48600938 -71683374 - B4 SINE B4 -212 80 2 2 955 449 374 36 23 chr13 48600981 48601200 -71683112 + Tigger5 DNA MER2_type 8 229 -2177 2 955 469 269 144 0 chr13 48601546 48601713 -71682599 + B4A SINE B4 1 191 -101 2 955 266 241 59 24 chr13 48601644 48601729 -71682583 + PB1D9 SINE Alu 31 118 -2 2 955 1076 103 0 0 chr13 48601736 48601882 -71682430 + B1_Mus2 SINE Alu 2 147 0 2 955 542 234 133 7 chr13 48603318 48603589 -71680723 + L1MC LINE L1 4185 4489 -1657 2 955 1112 94 0 0 chr13 48603596 48603756 -71680556 + B2_Mm2 SINE B2 5 164 -31 2 955 228 135 0 0 chr13 48603782 48603819 -71680493 + (GGA)n Simple_repeat Simple_repeat 3 39 0 2 955 264 326 141 40 chr13 48603821 48604048 -71680264 + L1MC LINE L1 4530 4779 -1367 2 955 1604 276 34 38 chr13 48604466 48604963 -71679349 + Lx8 LINE L1 6098 6592 -881 2 955 573 306 88 26 chr13 48604968 48605307 -71679005 + Lx8 LINE L1 6695 7046 -650 2 955 2824 66 60 13 chr13 48605309 48605691 -71678621 - MTB LTR MaLR 0 400 1 2 955 3986 121 139 16 chr13 48605691 48606489 -71677823 - MTB-int LTR MaLR 0 1258 363 2 955 374 133 310 26 chr13 48606496 48606612 -71677700 - B2_Mm2 SINE B2 0 195 47 2 955 1072 69 69 0 chr13 48606643 48606803 -71677509 - B2_Mm1t SINE B2 -14 179 9 2 955 2444 85 6 0 chr13 48606802 48607165 -71677147 - MTB-int LTR MaLR -732 366 2 2 955 3075 68 13 2 chr13 48607166 48607562 -71676750 - MTB LTR MaLR 0 400 1 2 955 322 347 56 20 chr13 48607562 48607759 -71676553 + Lx8 LINE L1 7056 7259 -214 2 955 266 148 19 0 chr13 48608110 48608164 -71676148 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 955 216 214 0 18 chr13 48609134 48609191 -71675121 + (TTTG)n Simple_repeat Simple_repeat 4 59 0 2 955 382 314 189 45 chr13 48609519 48610190 -71674122 + L1MEc LINE L1 58 825 -5575 2 955 835 221 38 24 chr13 48610274 48610487 -71673825 + B3 SINE B2 1 216 0 2 955 296 211 0 78 chr13 48610528 48610605 -71673707 + B4A SINE B4 6 76 -216 2 955 616 216 51 29 chr13 48610625 48610763 -71673549 - B1_Mur3 SINE Alu -2 147 7 2 955 265 236 93 61 chr13 48610737 48610864 -71673448 + B4A SINE B4 230 292 0 2 955 243 0 0 0 chr13 48610864 48610891 -71673421 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 955 729 302 109 69 chr13 48611640 48611788 -71672524 + L1MC3 LINE L1 6444 6593 -1192 2 955 3228 43 8 2 chr13 48611788 48612182 -71672130 + MTA_Mm LTR MaLR 1 396 0 2 955 729 302 109 69 chr13 48612182 48612428 -71671884 + L1MC3 LINE L1 6594 6854 -931 2 955 2249 135 6 0 chr13 48612428 48612755 -71671557 - ORR1A4 LTR MaLR 0 329 1 2 955 729 302 109 69 chr13 48612755 48612971 -71671341 + L1MC3 LINE L1 6855 7080 -705 2 955 504 0 0 0 chr13 48612994 48613050 -71671262 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 955 1111 183 20 5 chr13 48613096 48613299 -71671013 - B3 SINE B2 -6 210 5 2 955 322 295 151 73 chr13 48613349 48613528 -71670784 + B3A SINE B2 2 194 -4 2 955 274 275 21 42 chr13 48613641 48613736 -71670576 + PB1 SINE Alu 28 120 -7 2 955 1994 107 0 56 chr13 48613830 48614168 -71670144 + ORR1A2 LTR MaLR 1 319 -8 2 955 270 205 107 71 chr13 48614342 48614426 -71669886 - PB1D10 SINE Alu 0 117 31 2 955 261 0 0 0 chr13 48614559 48614588 -71669724 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 955 315 0 0 0 chr13 48614588 48614622 -71669690 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 955 218 338 0 0 chr13 48614626 48614694 -71669618 - ID4_ SINE ID -5 78 11 2 955 3275 56 0 5 chr13 48614744 48615142 -71669170 - MTA_Mm LTR MaLR 0 396 1 2 955 11277 174 57 33 chr13 48615156 48618065 -71666247 - Lx6 LINE L1 0 7460 4434 2 955 1080 71 43 0 chr13 48618065 48618205 -71666107 - B1_Mus1 SINE Alu -1 147 2 2 955 11277 148 63 35 chr13 48618205 48618924 -71665388 - Lx6 LINE L1 -1447 4433 3709 2 955 211 146 24 0 chr13 48619029 48619070 -71665242 + T-rich Low_complexity Low_complexity 4 45 0 2 955 424 240 38 9 chr13 48619071 48619176 -71665136 - PB1D10 SINE Alu -2 115 8 2 955 501 136 0 24 chr13 48619215 48619298 -71665014 - L1_Mur3 LINE L1 -1951 3929 3849 2 955 301 235 15 0 chr13 48620029 48620097 -71664215 - PB1D10 SINE Alu -7 110 42 2 955 1218 146 177 127 chr13 48620587 48620948 -71663364 - RLTR30 LTR ERV1 0 379 1 2 955 1945 134 65 9 chr13 48621103 48621443 -71662869 - ORR1B2 LTR MaLR -8 359 1 2 955 832 259 27 35 chr13 48621618 48621874 -71662438 - MTE2b LTR MaLR -1 378 125 2 955 635 182 28 14 chr13 48621890 48622035 -71662277 + B1_Mur1 SINE Alu 2 148 -1 2 955 571 204 6 38 chr13 48622046 48622229 -71662083 + GA-rich Low_complexity Low_complexity 3 179 0 2 955 232 281 53 0 chr13 48622232 48622289 -71662023 + G-rich Low_complexity Low_complexity 1 60 0 2 955 568 203 31 23 chr13 48622289 48622632 -71661680 + GA-rich Low_complexity Low_complexity 1 345 0 2 955 847 163 0 12 chr13 48622684 48622852 -71661460 + G-rich Low_complexity Low_complexity 1 166 0 2 955 700 201 156 0 chr13 48622902 48623081 -71661231 + L1ME1 LINE L1 5967 6173 -6 2 955 478 269 148 104 chr13 48623149 48623349 -71660963 + B4A SINE B4 2 229 -63 2 955 1351 96 5 11 chr13 48623349 48623539 -71660773 + B2_Mm2 SINE B2 5 193 -2 2 955 478 269 148 104 chr13 48623539 48623616 -71660696 + B4A SINE B4 230 291 -1 2 955 207 216 0 0 chr13 48623625 48623662 -71660650 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 955 806 214 65 66 chr13 48624104 48624425 -71659887 + MER33 DNA MER1_type 1 323 -1 2 955 787 195 0 32 chr13 48624736 48624890 -71659422 + B1_Mur2 SINE Alu 1 149 0 2 955 402 283 0 83 chr13 48625391 48625499 -71658813 - PB1D10 SINE Alu 0 117 19 2 955 3801 156 80 76 chr13 48625744 48626625 -71657687 + RMER19B LTR ERVK 1 884 -18 2 955 1292 38 11 32 chr13 48626627 48626815 -71657497 + B2_Mm2 SINE B2 1 184 -11 2 955 731 191 227 5 chr13 48626908 48627124 -71657188 + ORR1D1 LTR MaLR 110 373 -1 2 955 585 38 0 0 chr13 48627193 48627273 -71657039 - L1Md_F2 LINE L1 -3 6579 6500 2 119 1050 276 212 19 chr13 48627281 48628060 -71656252 - L1M3 LINE L1 -1736 4407 3477 2 956 334 239 154 9 chr13 48629795 48629905 -71654407 + B1_Mur2 SINE Alu 10 135 -14 2 956 901 218 212 30 chr13 48630098 48630433 -71653879 + MTD LTR MaLR 10 405 -14 2 956 326 329 24 0 chr13 48630763 48630848 -71653464 + PB1D10 SINE Alu 2 88 -29 2 956 326 276 11 11 chr13 48634194 48634282 -71650030 + PB1D7 SINE Alu 33 120 0 2 956 494 278 31 16 chr13 48634473 48634601 -71649711 + RSINE1 SINE B4 3 132 -33 2 956 251 289 29 12 chr13 48634612 48634728 -71649584 + L1M4 LINE L1 5484 5604 -580 2 956 371 237 40 0 chr13 48634815 48634891 -71649421 + MER21B LTR ERV1 137 215 -648 2 956 462 294 21 48 chr13 48635051 48635237 -71649075 + MER21B LTR ERV1 465 645 -218 2 956 283 169 153 92 chr13 48635341 48635439 -71648873 + L1M4 LINE L1 5611 5714 -470 2 956 275 186 85 0 chr13 48635770 48635852 -71648460 + B3A SINE B2 2 102 -93 2 956 337 228 50 12 chr13 48636040 48636120 -71648192 + ID4_ SINE ID 1 83 0 2 956 239 314 43 0 chr13 48636164 48636234 -71648078 - ID4 SINE ID -9 74 2 2 956 683 203 151 21 chr13 48636341 48636527 -71647785 + B3 SINE B2 3 212 -4 2 956 257 247 11 86 chr13 48636667 48636760 -71647552 - B1F SINE Alu -61 88 3 2 956 213 197 15 103 chr13 48636699 48636767 -71647545 - ID_B1 SINE B4 -85 139 78 2 956 288 258 41 82 chr13 48638032 48638129 -71646183 + PB1D9 SINE Alu 2 94 -26 2 956 532 217 302 35 chr13 48639176 48639348 -71644964 - ID_B1 SINE B4 -5 219 2 2 956 515 221 23 62 chr13 48639405 48639535 -71644777 - RSINE1 SINE B4 -29 136 12 2 956 229 308 26 0 chr13 48639726 48639804 -71644508 - ID SINE ID -141 83 4 2 956 794 129 7 21 chr13 48639858 48640000 -71644312 - B1_Mur3 SINE Alu -1 148 9 2 956 953 46 0 15 chr13 48640370 48640503 -71643809 - B1_Mus1 SINE Alu 0 148 18 2 956 380 229 56 84 chr13 48640378 48640521 -71643791 - B4A SINE B4 -71 221 83 2 956 198 71 0 0 chr13 48641157 48641185 -71643127 + (CCCCG)n Simple_repeat Simple_repeat 2 29 0 3 956 24 32 0 0 chr13 48641837 48641868 -71642444 + GC_rich Low_complexity Low_complexity 1 31 0 3 956 183 184 0 0 chr13 48642962 48643000 -71641312 + T-rich Low_complexity Low_complexity 1 38 0 3 956 731 256 35 52 chr13 48643527 48643814 -71640498 + MLT2B1 LTR ERVL 1 288 -126 3 956 586 208 30 23 chr13 48643837 48643970 -71640342 + RSINE1 SINE B4 3 136 -29 3 956 260 282 35 23 chr13 48644071 48644158 -71640154 - Tigger5 DNA MER2_type -1 2405 2318 3 956 1142 68 7 0 chr13 48644269 48644415 -71639897 + B1_Mus1 SINE Alu 1 147 -1 3 956 291 357 5 66 chr13 48644660 48644858 -71639454 + Charlie8 DNA MER1_type 4 189 -2239 3 956 582 222 269 11 chr13 48645267 48645449 -71638863 + B4A SINE B4 58 286 -6 3 956 288 53 0 0 chr13 48645472 48645510 -71638802 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 956 2530 113 169 24 chr13 48645602 48646064 -71638248 + RLTR24 LTR ERV1 1 529 0 3 956 528 251 83 12 chr13 48646252 48646421 -71637891 + ID_B1 SINE B4 18 198 -26 3 956 245 320 87 31 chr13 48646600 48646829 -71637483 + MIRb SINE MIR 27 268 0 3 956 1083 76 14 0 chr13 48647027 48647172 -71637140 + B1_Mus2 SINE Alu 1 147 0 3 956 697 139 148 0 chr13 48647200 48647322 -71636990 + B1_Mur4 SINE Alu 1 140 -10 3 956 228 314 45 68 chr13 48648233 48648366 -71635946 + MLT1J LTR MaLR 5 134 -378 3 956 216 0 0 0 chr13 48648434 48648458 -71635854 + (CCCCCA)n Simple_repeat Simple_repeat 3 26 0 3 956 454 290 105 35 chr13 48649146 48649403 -71634909 - Tigger7 DNA MER2_type -6 2485 2211 3 956 569 345 35 67 chr13 48649447 48649789 -71634523 - Tigger7 DNA MER2_type -2153 338 8 3 956 2294 153 20 10 chr13 48649879 48650269 -71634043 - ORR1B1 LTR MaLR 0 394 1 3 956 624 116 0 0 chr13 48650588 48650683 -71633629 + (GGGA)n Simple_repeat Simple_repeat 4 98 0 3 956 239 246 46 0 chr13 48650830 48650895 -71633417 - L1MA10 LINE L1 -97 6237 6170 3 956 216 0 0 0 chr13 48650895 48650919 -71633393 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 956 3110 51 51 0 chr13 48650919 48651310 -71633002 + RLTR10A LTR ERVK 1 411 0 3 956 807 209 58 47 chr13 48651321 48651512 -71632800 - B3 SINE B2 -19 197 5 3 956 293 304 69 9 chr13 48651807 48651923 -71632389 + B1F1 SINE Alu 18 140 -9 3 956 311 337 40 15 chr13 48652122 48652324 -71631988 - L1MEc LINE L1 -1949 4370 4164 3 956 346 292 0 20 chr13 48652328 48652426 -71631886 + MER21B LTR ERV1 1 96 -767 3 956 2407 153 21 28 chr13 48652494 48652708 -71631604 - MTC LTR MaLR 0 421 204 3 956 753 85 0 0 chr13 48652708 48652814 -71631498 + (TTTTC)n Simple_repeat Simple_repeat 4 109 0 3 956 3573 49 0 2 chr13 48652817 48653248 -71631064 - L1_Mus1 LINE L1 0 6567 6138 3 956 2407 153 21 28 chr13 48653248 48653453 -71630859 - MTC LTR MaLR -218 203 1 3 956 226 281 120 33 chr13 48653457 48653549 -71630763 + MER21B LTR ERV1 131 230 -633 3 956 693 211 75 0 chr13 48653565 48653698 -71630614 - B1_Mur1 SINE Alu -6 143 1 3 956 2152 137 15 15 chr13 48653801 48654128 -71630184 + ORR1A2 LTR MaLR 1 327 0 3 956 448 317 56 7 chr13 48654264 48654407 -71629905 - RSINE1 SINE B4 -15 150 1 3 956 468 298 49 31 chr13 48654420 48654708 -71629604 - L1MEc LINE L1 -4003 2397 2105 3 956 465 272 0 34 chr13 48654708 48654826 -71629486 + B4A SINE B4 177 290 -2 3 956 405 235 13 7 chr13 48654847 48655001 -71629311 + (CA)n Simple_repeat Simple_repeat 1 155 0 3 956 289 43 43 0 chr13 48655369 48655416 -71628896 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 3 956 253 217 16 16 chr13 48655460 48655521 -71628791 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 956 670 269 102 42 chr13 48655528 48655792 -71628520 - B4A SINE B4 -8 284 5 3 956 789 231 162 11 chr13 48656071 48656355 -71627957 - L1MEc LINE L1 -5543 857 531 3 956 488 288 57 57 chr13 48656408 48656691 -71627621 - L1MEc LINE L1 -6074 326 44 3 956 755 199 55 6 chr13 48657229 48657411 -71626901 + B3 SINE B2 1 191 -25 3 956 318 264 83 91 chr13 48657630 48657751 -71626561 - B4 SINE B4 -168 124 5 3 956 2372 125 43 0 chr13 48658027 48658379 -71625933 + ORR1B2 LTR MaLR 1 367 0 3 956 459 0 0 0 chr13 48659249 48659300 -71625012 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 956 332 272 96 0 chr13 48659315 48659440 -71624872 - B4A SINE B4 -2 290 154 3 956 474 246 9 0 chr13 48659485 48659595 -71624717 - PB1D10 SINE Alu -1 116 6 3 956 415 17 51 0 chr13 48659682 48659741 -71624571 + (TTTTG)n Simple_repeat Simple_repeat 4 65 0 3 956 1189 35 0 7 chr13 48659742 48659884 -71624428 - B1_Mus1 SINE Alu -6 142 2 3 956 27 49 0 0 chr13 48659902 48659943 -71624369 + AT_rich Low_complexity Low_complexity 1 41 0 3 956 1382 76 27 5 chr13 48660052 48660237 -71624075 - B2_Mm1a SINE B2 -4 189 1 3 956 511 205 285 35 chr13 48660779 48660951 -71623361 + ID_B1 SINE B4 3 217 -7 3 956 395 259 15 0 chr13 48661036 48661144 -71623168 + PB1D9 SINE Alu 2 118 -2 3 956 1141 37 0 0 chr13 48661149 48661283 -71623029 + B1_Mus1 SINE Alu 2 135 -13 3 956 234 62 0 0 chr13 48661283 48661315 -71622997 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 956 1173 55 14 0 chr13 48662444 48662589 -71621723 - B1_Mm SINE Alu 0 147 1 3 956 903 259 24 88 chr13 48662645 48662941 -71621371 + B4A SINE B4 7 283 -9 3 956 295 329 71 10 chr13 48663014 48663182 -71621130 + L1MB7 LINE L1 5486 5663 -517 3 956 588 204 90 8 chr13 48663238 48663371 -71620941 + B1_Mur2 SINE Alu 6 149 0 3 956 334 270 42 35 chr13 48663371 48663513 -71620799 + L1MB7 LINE L1 5775 5917 -267 3 956 1239 98 0 0 chr13 48663743 48664185 -71620127 + (CA)n Simple_repeat Simple_repeat 1 442 0 3 956 371 286 51 13 chr13 48664333 48664489 -71619823 - L1M5 LINE L1 -1453 4693 4532 3 956 182 37 0 36 chr13 48665379 48665407 -71618905 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 3 956 648 174 0 165 chr13 48665410 48665568 -71618744 - B1_Mus1 SINE Alu -6 142 11 3 956 1228 63 103 0 chr13 48665616 48665790 -71618522 + B2_Mm1t SINE B2 2 193 0 3 956 364 333 68 17 chr13 48666140 48666317 -71617995 - B4A SINE B4 0 292 107 3 956 405 0 0 0 chr13 48666318 48666363 -71617949 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 956 271 158 88 50 chr13 48666520 48666600 -71617712 - RMER1A Other Other -10 1020 938 3 956 1412 248 60 64 chr13 48666608 48667220 -71617092 - RMER1B Other Other -553 513 44 3 956 189 0 0 0 chr13 48667871 48667892 -71616420 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 956 425 278 85 57 chr13 48667898 48668039 -71616273 - RSINE1 SINE B4 -17 148 4 3 956 836 242 15 10 chr13 48668292 48668492 -71615820 - B3 SINE B2 -4 212 12 3 956 1023 271 28 14 chr13 48668661 48668946 -71615366 - B4 SINE B4 -3 289 1 3 956 354 279 71 39 chr13 48669025 48669152 -71615160 + Charlie1b DNA MER1_type 126 256 -267 3 956 399 272 50 66 chr13 48669743 48669924 -71614388 - MLT-int LTR MaLR -1189 546 369 3 956 225 0 0 0 chr13 48670637 48670662 -71613650 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 3 956 751 177 34 7 chr13 48670909 48671057 -71613255 + B3 SINE B2 1 152 -64 3 956 520 287 54 18 chr13 48671142 48671309 -71613003 + B3A SINE B2 2 174 -24 3 956 351 78 0 0 chr13 48671317 48671368 -71612944 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 956 216 316 35 0 chr13 48671392 48671449 -71612863 + ID4 SINE ID 19 77 -6 3 956 237 333 15 0 chr13 48671398 48671464 -71612848 + ID_B1 SINE B4 28 94 -130 3 956 2045 218 54 21 chr13 48671480 48671996 -71612316 + RMER5 LTR ERV1 1 533 -1 3 956 377 20 0 20 chr13 48672648 48672699 -71611613 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 956 576 276 206 16 chr13 48676586 48676829 -71607483 + B4A SINE B4 2 290 -2 3 956 644 193 95 15 chr13 48677425 48677562 -71606750 - B1_Mur1 SINE Alu 0 149 2 3 956 228 276 13 0 chr13 48677747 48677823 -71606489 - ID4 SINE ID -3 80 4 3 956 485 229 50 0 chr13 48677823 48677953 -71606359 - B1F SINE Alu -2 147 10 3 956 371 303 48 21 chr13 48677827 48677972 -71606340 - ID_B1 SINE B4 -6 218 70 3 956 401 182 13 0 chr13 48677997 48678074 -71606238 - ID4 SINE ID -4 79 2 3 956 826 223 5 32 chr13 48678112 48678302 -71606010 + B3A SINE B2 1 185 -13 3 956 384 22 0 0 chr13 48679067 48679112 -71605200 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 956 218 319 14 0 chr13 48679236 48679308 -71605004 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 956 287 322 100 7 chr13 48679309 48679459 -71604853 - RSINE1 SINE B4 0 165 2 3 956 599 216 44 89 chr13 48680782 48680985 -71603327 + B3A SINE B2 5 198 0 3 956 1049 211 10 5 chr13 48683975 48684180 -71600132 + B3 SINE B2 1 206 -10 3 956 201 74 0 0 chr13 48684743 48684770 -71599542 + (TTAG)n Simple_repeat Simple_repeat 2 28 0 3 956 850 181 0 0 chr13 48684773 48684911 -71599401 - B1_Mur1 SINE Alu -7 142 5 3 956 311 240 26 13 chr13 48687186 48687262 -71597050 - B1_Mur3 SINE Alu -72 77 1 3 956 217 310 152 37 chr13 48687603 48687794 -71596518 - MIRb SINE MIR -51 217 5 3 956 21 36 0 0 chr13 48689024 48689052 -71595260 + AT_rich Low_complexity Low_complexity 1 28 0 3 956 380 253 205 35 chr13 48691713 48692124 -71592188 - L1M4 LINE L1 -1152 4994 4513 3 956 399 329 78 0 chr13 48692531 48692774 -71591538 + L1MB5 LINE L1 714 975 -6359 3 956 295 265 116 15 chr13 48692922 48693121 -71591191 + L1MB5 LINE L1 1625 1843 -5491 3 956 441 244 299 9 chr13 48693301 48693512 -71590800 + L1MB5 LINE L1 2117 2388 -4946 3 956 312 261 124 85 chr13 48693615 48693816 -71590496 + L1MB5 LINE L1 2608 2816 -4518 3 956 542 257 13 6 chr13 48693827 48693999 -71590313 + L1MB5 LINE L1 6132 6296 -738 3 956 628 312 92 20 chr13 48694013 48694554 -71589758 + L1MB5 LINE L1 6447 7027 -17 3 956 910 299 34 8 chr13 48694562 48694971 -71589341 + L1MB8 LINE L1 5327 5755 -536 3 956 390 295 40 59 chr13 48695014 48695216 -71589096 + L1MB8 LINE L1 5824 6021 -157 3 956 328 262 0 23 chr13 48696388 48696474 -71587838 + L1MDb LINE L1 957 1040 -5369 3 956 321 265 140 71 chr13 48696511 48696974 -71587338 + L1MDb LINE L1 3018 3512 -2894 3 956 250 271 157 0 chr13 48697024 48697094 -71587218 + RMER30 DNA MER1_type 4 84 -118 4 956 405 0 0 0 chr13 48697095 48697140 -71587172 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 956 336 247 0 0 chr13 48697142 48697215 -71587097 + RMER30 DNA MER1_type 129 201 -1 4 956 414 263 137 21 chr13 48697215 48697456 -71586856 + L1MDb LINE L1 3592 3860 -2546 3 956 235 321 112 6 chr13 48697754 48697923 -71586389 + L1MC4 LINE L1 6500 6686 -1356 4 956 807 246 17 11 chr13 48697923 48698104 -71586208 - B3A SINE B2 -16 182 1 4 956 390 247 0 31 chr13 48698110 48698206 -71586106 + L1MC4 LINE L1 6782 6874 -1168 4 956 506 330 70 3 chr13 48698425 48698723 -71585589 + L1MC4 LINE L1 7196 7513 -529 4 956 309 294 83 0 chr13 48698846 48698955 -71585357 + B1F1 SINE Alu 32 149 0 4 956 1485 51 6 0 chr13 48698990 48699168 -71585144 + B2_Mm1t SINE B2 1 179 -14 4 956 459 0 0 0 chr13 48699277 48699328 -71584984 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 956 233 250 54 0 chr13 48699596 48699652 -71584660 - MIRb SINE MIR -185 83 25 4 956 424 324 50 74 chr13 48700663 48700986 -71583326 + ORR1E LTR MaLR 2 316 -43 4 956 363 233 58 0 chr13 48701043 48701129 -71583183 - RSINE1 SINE B4 -38 127 37 4 956 322 251 16 4 chr13 48701812 48701905 -71582407 - ID4_ SINE ID -52 100 5 4 956 523 175 208 0 chr13 48701987 48702107 -71582205 + B1_Mur2 SINE Alu 5 149 0 4 956 376 161 25 0 chr13 48702115 48702196 -71582116 + GA-rich Low_complexity Low_complexity 2 84 0 4 956 235 150 0 32 chr13 48702259 48702321 -71581991 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 956 276 30 0 0 chr13 48702820 48702853 -71581459 + (CCCTA)n Simple_repeat Simple_repeat 3 35 0 4 956 180 97 0 0 chr13 48702863 48702894 -71581418 + (CAAG)n Simple_repeat Simple_repeat 1 31 0 4 956 243 232 18 0 chr13 48702973 48703029 -71581283 + ID4 SINE ID 25 81 -2 4 956 1502 103 244 0 chr13 48705215 48705477 -71578835 + ORR1A3 LTR MaLR 1 326 0 4 956 369 0 0 0 chr13 48706190 48706231 -71578081 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 956 282 215 46 0 chr13 48706284 48706349 -71577963 + L1M5 LINE L1 4692 4759 -1387 4 956 25 0 0 0 chr13 48706443 48706468 -71577844 + AT_rich Low_complexity Low_complexity 1 25 0 4 956 392 118 15 0 chr13 48706472 48706540 -71577772 + (GGGAGA)n Simple_repeat Simple_repeat 5 73 0 4 956 475 258 32 10 chr13 48706547 48706686 -71577626 - B3A SINE B2 -53 140 1 4 956 3463 182 61 69 chr13 48706722 48706768 -71577544 + Lx6 LINE L1 6695 6740 -720 4 956 190 0 0 62 chr13 48706768 48706800 -71577512 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 4 956 3463 182 61 69 chr13 48706800 48707492 -71576820 + Lx6 LINE L1 6741 7437 -23 4 956 1400 85 16 0 chr13 48707492 48707681 -71576631 - B2_Mm2 SINE B2 -2 193 2 4 956 3463 182 61 69 chr13 48707681 48707707 -71576605 + Lx6 LINE L1 7438 7454 -6 4 956 318 186 81 0 chr13 48707712 48707798 -71576514 + L1MC3 LINE L1 5160 5252 -894 4 956 229 316 0 0 chr13 48707930 48707987 -71576325 + B1F2 SINE Alu 2 58 -91 4 956 312 324 86 7 chr13 48708539 48708679 -71575633 + RSINE1 SINE B4 3 153 -12 4 956 267 293 147 0 chr13 48708750 48708907 -71575405 + L1MC3 LINE L1 5570 5749 -2036 4 956 713 314 47 38 chr13 48709019 48709443 -71574869 + L1MC3 LINE L1 5870 6297 -1488 4 956 909 242 93 16 chr13 48709677 48710000 -71574312 - Tigger7 DNA MER2_type -10 2481 2134 4 956 968 279 40 22 chr13 48710010 48710288 -71574024 - Tigger7 DNA MER2_type -2198 293 11 4 956 818 260 105 7 chr13 48710307 48710601 -71573711 + L1MC3 LINE L1 6609 6931 -854 4 956 840 74 45 7 chr13 48710601 48710896 -71573416 + (CAGAG)n Simple_repeat Simple_repeat 1 306 0 4 956 342 0 0 0 chr13 48710896 48710934 -71573378 + (GA)n Simple_repeat Simple_repeat 2 39 0 4 956 738 105 46 6 chr13 48710948 48711121 -71573191 + (CAGAG)n Simple_repeat Simple_repeat 1 180 0 4 956 352 303 123 63 chr13 48711686 48711954 -71572358 - B4 SINE B4 -8 284 1 4 956 204 40 0 0 chr13 48713732 48713757 -71570555 + (GGA)n Simple_repeat Simple_repeat 3 27 0 4 956 243 304 14 0 chr13 48713952 48714021 -71570291 + ID4 SINE ID 3 72 -11 4 956 352 236 37 9 chr13 48714111 48714218 -71570094 + MER57A-int LTR ERV1 5819 5928 -259 4 956 523 208 49 49 chr13 48714781 48714943 -71569369 + RSINE1 SINE B4 4 165 0 4 956 1470 40 17 6 chr13 48715065 48715243 -71569069 + B2_Mm2 SINE B2 1 180 -15 4 956 462 282 223 26 chr13 48716083 48716356 -71567956 + L1M2 LINE L1 5438 5764 -536 4 956 267 255 41 148 chr13 48716714 48716898 -71567414 + L1MA7 LINE L1 4820 4976 -1164 4 956 931 174 0 0 chr13 48716898 48717042 -71567270 + B1_Mur2 SINE Alu 1 144 -5 4 956 264 255 41 148 chr13 48717042 48717101 -71567211 + L1MA7 LINE L1 4977 5037 -1103 4 956 377 264 161 7 chr13 48717154 48717350 -71566962 + L1MA7 LINE L1 5502 5720 -592 4 956 524 276 57 38 chr13 48717444 48717655 -71566657 + L1MA7 LINE L1 5950 6164 -127 4 956 303 231 0 0 chr13 48717793 48717864 -71566448 + ID4 SINE ID 24 94 -58 4 956 363 23 0 0 chr13 48717932 48717976 -71566336 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 956 226 239 125 29 chr13 48718636 48718748 -71565564 - MIRm SINE MIR -114 154 30 4 956 864 52 0 0 chr13 48719294 48719410 -71564902 - B1_Mm SINE Alu -8 139 24 4 956 318 200 0 149 chr13 48719331 48719425 -71564887 - MT2B LTR ERVL -344 257 178 4 956 305 250 200 0 chr13 48720162 48720302 -71564010 - MER106A DNA MER1_type 0 236 69 4 956 2358 78 48 0 chr13 48722589 48722922 -71561390 - L1Md_F2 LINE L1 -435 6147 5799 4 956 1799 64 8 67 chr13 48722922 48723189 -71561123 + L1Md_F2 LINE L1 6332 6582 0 4 956 194 310 27 40 chr13 48723718 48723792 -71560520 - L2c LINE L2 -228 3159 3087 4 956 311 219 53 207 chr13 48724135 48724285 -71560027 + RMER15 LTR ERVL 4 130 -445 4 956 847 199 9 24 chr13 48724230 48724413 -71559899 - MT2B LTR ERVL -319 174 1 4 956 418 146 75 43 chr13 48724455 48724548 -71559764 - ORR1B1-int LTR MaLR -1323 640 545 4 956 3439 129 18 19 chr13 48724572 48725146 -71559166 - ORR1B1-int LTR MaLR -760 610 1 4 956 2007 146 13 74 chr13 48725146 48725523 -71558789 - ORR1B1 LTR MaLR 0 394 41 4 956 682 265 132 13 chr13 48726028 48726284 -71558028 - RMER20B LTR ERVK -45 471 180 4 956 2291 134 26 29 chr13 48726742 48727090 -71557222 - ORR1C1 LTR MaLR 0 378 21 4 956 867 141 109 23 chr13 48727090 48727264 -71557048 - B2_Mm2 SINE B2 -5 190 2 4 956 2291 134 26 29 chr13 48727264 48727292 -71557020 - ORR1C1 LTR MaLR -358 20 3 4 956 227 250 54 0 chr13 48727522 48727578 -71556734 - B1F1 SINE Alu -87 62 4 4 956 967 226 37 46 chr13 48727857 48728075 -71556237 - B3 SINE B2 0 216 1 4 956 405 0 0 0 chr13 48728081 48728126 -71556186 + (TTA)n Simple_repeat Simple_repeat 1 45 0 4 956 487 305 71 19 chr13 48728177 48728331 -71555981 + RSINE1 SINE B4 4 165 0 4 956 1021 278 90 38 chr13 48729084 48729435 -71554877 - MTE2b LTR MaLR 0 370 1 4 956 482 305 93 29 chr13 48729544 48729716 -71554596 - B3A SINE B2 -11 187 5 4 956 232 329 27 0 chr13 48729771 48729844 -71554468 - AluG_3 SINE Alu -90 221 147 4 956 1378 87 11 5 chr13 48730301 48730487 -71553825 - B2_Mm2 SINE B2 -7 188 2 4 956 684 276 99 29 chr13 48730489 48730762 -71553550 - Lx8 LINE L1 -33 7440 7149 4 956 724 273 0 0 chr13 48730832 48730982 -71553330 - RSINE1 SINE B4 -5 160 11 4 956 531 324 11 38 chr13 48731103 48731286 -71553026 - B4 SINE B4 0 292 115 4 956 639 254 22 0 chr13 48731295 48731433 -71552879 + RSINE1 SINE B4 8 148 -17 4 956 188 35 35 0 chr13 48731438 48731467 -71552845 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 956 877 191 147 5 chr13 48731530 48731714 -71552598 + B3 SINE B2 1 210 -6 4 956 492 343 141 48 chr13 48731770 48732288 -71552024 + LTR84b LTR ERVL 127 692 -69 4 956 183 329 147 27 chr13 48732540 48732690 -71551622 - MIRb SINE MIR -71 197 30 4 956 1028 214 32 0 chr13 48732858 48733045 -71551267 + B3 SINE B2 24 216 0 4 956 643 287 151 53 chr13 48733071 48733470 -71550842 + MLT1E3 LTR MaLR 150 653 0 4 956 206 32 0 31 chr13 48733517 48733549 -71550763 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 956 1085 82 14 7 chr13 48733549 48733686 -71550626 - B1_Mus1 SINE Alu -9 139 1 4 956 909 154 7 0 chr13 48734101 48734237 -71550075 - B1_Mus2 SINE Alu -9 138 2 4 956 427 289 29 0 chr13 48734283 48734387 -71549925 - RSINE1 SINE B4 -43 122 16 4 956 653 203 26 71 chr13 48734376 48734530 -71549782 + B3 SINE B2 68 214 -2 4 956 408 294 46 31 chr13 48734557 48734568 -71549744 + ID_B1 SINE B4 76 204 -17 4 956 737 164 35 0 chr13 48734568 48734684 -71549628 + B1_Mur2 SINE Alu 8 127 -22 4 956 358 204 74 6 chr13 48734688 48734851 -71549461 + (TA)n Simple_repeat Simple_repeat 2 175 0 4 956 915 147 218 0 chr13 48735508 48735678 -71548634 + B3 SINE B2 5 211 -5 4 956 258 315 54 27 chr13 48736179 48736290 -71548022 + L3b LINE CR1 197 310 -172 4 956 1272 48 0 0 chr13 48736482 48736629 -71547683 + B1_Mus2 SINE Alu 1 147 0 4 956 743 256 124 34 chr13 48736714 48736981 -71547331 - B4A SINE B4 0 292 2 4 956 226 321 170 19 chr13 48737395 48737713 -71546599 + L2 LINE L2 2715 3080 -339 4 956 1090 254 42 117 chr13 48738707 48739109 -71545203 - MTE2a LTR MaLR -6 373 2 4 956 967 104 41 20 chr13 48739109 48739256 -71545056 + B1_Mur4 SINE Alu 1 150 0 4 956 666 318 101 14 chr13 48739537 48739882 -71544430 + ERVL-E-int LTR ERVL 3797 4171 -1496 4 956 222 118 0 0 chr13 48739887 48739921 -71544391 + (GGA)n Simple_repeat Simple_repeat 2 35 0 4 956 988 114 0 0 chr13 48740022 48740162 -71544150 - B1_Mur3 SINE Alu -1 148 9 4 956 474 202 0 146 chr13 48740066 48740217 -71544095 - MT2B LTR ERVL -344 257 129 4 956 343 250 164 56 chr13 48740614 48740678 -71543634 - L1M5 LINE L1 -1330 4816 4761 4 956 701 196 80 0 chr13 48740678 48740816 -71543496 - B1_Mur2 SINE Alu 0 149 1 4 956 343 250 164 56 chr13 48740816 48740946 -71543366 - L1M5 LINE L1 -1386 4760 4601 4 956 210 37 0 0 chr13 48740946 48740973 -71543339 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 956 1285 41 0 0 chr13 48740974 48741121 -71543191 - B1_Mm SINE Alu 0 147 1 4 956 476 290 43 49 chr13 48741152 48741337 -71542975 - MLT1A1 LTR MaLR -8 400 217 4 956 242 264 114 53 chr13 48741543 48741771 -71542541 - L1M5 LINE L1 -1638 4508 4267 4 956 436 243 78 0 chr13 48741885 48741988 -71542324 - B3 SINE B2 -10 206 96 4 956 409 341 36 52 chr13 48742002 48742194 -71542118 - L1MD LINE L1 -2008 4138 3950 4 956 629 259 46 46 chr13 48742199 48742393 -71541919 - B3A SINE B2 -2 196 3 5 956 409 265 48 57 chr13 48742394 48742636 -71541676 - L1M5 LINE L1 -2154 3992 3752 4 956 562 237 9 0 chr13 48742732 48742846 -71541466 - PB1D7 SINE Alu -1 119 5 5 956 532 355 67 73 chr13 48742874 48743323 -71540989 - L1M5 LINE L1 -2456 3690 3262 4 956 262 265 0 0 chr13 48743323 48743391 -71540921 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 956 789 201 18 70 chr13 48743392 48743563 -71540749 - RSINE1 SINE B4 0 165 4 5 956 296 291 234 0 chr13 48743689 48743830 -71540482 - ZP3AR Satellite Satellite -32 180 7 5 956 909 225 85 40 chr13 48743934 48744262 -71540050 - RLTR15 LTR ERVK -16 343 1 5 956 341 168 45 8 chr13 48744346 48744427 -71539885 - ID4 SINE ID -45 107 24 5 956 335 23 23 0 chr13 48744484 48744528 -71539784 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 956 361 325 37 5 chr13 48744529 48744718 -71539594 - L1M5 LINE L1 -3284 2862 2668 4 956 2052 155 3 3 chr13 48744760 48745071 -71539241 - RLTR10E LTR ERVK 0 311 1 5 956 204 324 14 0 chr13 48745098 48745169 -71539143 + (TATATG)n Simple_repeat Simple_repeat 5 76 0 5 956 3084 71 15 2 chr13 48745374 48745769 -71538543 + MTB LTR MaLR 1 400 0 5 956 854 39 0 0 chr13 48745789 48745893 -71538419 - B1_Mm SINE Alu 0 147 44 5 956 359 203 0 75 chr13 48745824 48745904 -71538408 - MT2B LTR ERVL -337 264 191 5 956 275 295 24 39 chr13 48745923 48746050 -71538262 - L1MEc LINE L1 -3882 2437 2313 5 956 814 227 90 16 chr13 48746072 48746260 -71538052 - B3 SINE B2 -10 206 5 5 956 427 334 82 58 chr13 48746297 48746662 -71537650 - L1MEc LINE L1 -5452 948 575 5 956 1410 65 21 16 chr13 48746731 48746918 -71537394 + B2_Mm2 SINE B2 1 188 -7 5 956 352 273 22 12 chr13 48747645 48747744 -71536568 + B4A SINE B4 138 237 -55 5 956 251 163 23 0 chr13 48747774 48747817 -71536495 + RSINE1 SINE B4 76 119 -46 5 956 1903 163 204 24 chr13 48747823 48748201 -71536111 - RLTR41 LTR ERV1 0 446 1 5 956 299 209 165 55 chr13 48748689 48748780 -71535532 - B1F SINE Alu -3 124 24 5 956 253 327 56 37 chr13 48748989 48749151 -71535161 - MLT1E1 LTR MaLR -97 557 393 5 956 482 256 0 0 chr13 48750192 48750282 -71534030 + PB1D10 SINE Alu 1 90 -27 5 956 404 271 18 27 chr13 48750282 48750302 -71534010 + ID_B1 SINE B4 82 190 -34 5 956 469 252 16 57 chr13 48750660 48750782 -71533530 + B3 SINE B2 4 120 -96 5 956 677 293 42 9 chr13 48750776 48750993 -71533319 + B4A SINE B4 50 273 -19 5 956 320 43 22 0 chr13 48751016 48751062 -71533250 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 956 474 172 94 31 chr13 48751672 48751768 -71532544 + ID_B1 SINE B4 103 204 -20 5 956 309 222 16 0 chr13 48751819 48751882 -71532430 + B1_Mur2 SINE Alu 40 103 -46 5 956 351 78 0 0 chr13 48751914 48751965 -71532347 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 956 483 36 0 67 chr13 48752180 48752269 -71532043 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 5 956 522 299 18 18 chr13 48752311 48752478 -71531834 + MER58B DNA MER1_type 36 202 -139 5 956 290 279 0 126 chr13 48752641 48752751 -71531561 + ID_B1 SINE B4 109 204 -20 5 956 189 0 0 0 chr13 48752751 48752772 -71531540 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 956 188 67 0 32 chr13 48752788 48752819 -71531493 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 956 240 311 40 0 chr13 48752915 48752989 -71531323 + B1F1 SINE Alu 70 146 -3 5 956 24 0 0 0 chr13 48753607 48753631 -71530681 + GC_rich Low_complexity Low_complexity 1 24 0 5 956 257 164 17 52 chr13 48758108 48758166 -71526146 + CT-rich Low_complexity Low_complexity 2 57 0 5 956 245 175 10 40 chr13 48758179 48758280 -71526032 + (CGGGG)n Simple_repeat Simple_repeat 1 98 0 5 956 45 93 0 0 chr13 48758306 48758435 -71525877 + GC_rich Low_complexity Low_complexity 1 129 0 5 956 24 32 0 0 chr13 48758617 48758648 -71525664 + GC_rich Low_complexity Low_complexity 1 31 0 5 957 229 219 57 150 chr13 48760330 48760470 -71523842 + LTR33A_ LTR ERVL 11 137 -394 5 957 344 68 0 33 chr13 48762320 48762381 -71521931 + (TTTTTG)n Simple_repeat Simple_repeat 2 60 0 5 957 605 226 17 0 chr13 48762478 48762593 -71521719 - B1_Mur2 SINE Alu -9 140 24 5 957 441 0 0 0 chr13 48762593 48762642 -71521670 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 957 258 262 31 151 chr13 48762696 48762722 -71521590 - B3A SINE B2 0 198 182 5 957 438 36 0 0 chr13 48762722 48762778 -71521534 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 957 258 262 31 151 chr13 48762778 48762976 -71521336 - B3A SINE B2 -17 181 1 5 957 687 25 0 0 chr13 48763212 48763293 -71521019 + (TG)n Simple_repeat Simple_repeat 1 81 0 5 957 423 0 0 0 chr13 48765465 48765512 -71518800 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 957 347 272 12 0 chr13 48765767 48765848 -71518464 - ID4 SINE ID 0 83 2 5 957 405 0 0 0 chr13 48765887 48765932 -71518380 + (TAA)n Simple_repeat Simple_repeat 1 45 0 5 957 287 333 17 93 chr13 48765932 48766104 -71518208 + Kanga1d DNA Tc2 436 594 -15 5 957 231 114 0 0 chr13 48766140 48766175 -71518137 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 5 957 729 274 139 28 chr13 48766183 48766435 -71517877 - B4 SINE B4 -6 286 7 5 957 813 180 0 51 chr13 48766464 48766622 -71517690 + B1_Mur4 SINE Alu 1 150 0 5 957 369 0 0 0 chr13 48766635 48766676 -71517636 + (CAAAC)n Simple_repeat Simple_repeat 5 45 0 5 957 284 302 47 0 chr13 48766777 48766863 -71517449 - MIRb SINE MIR -118 150 61 5 957 440 245 0 18 chr13 48767179 48767301 -71517011 + B1_Mur4 SINE Alu 2 148 -1 5 957 951 135 6 17 chr13 48767316 48767497 -71516815 + GA-rich Low_complexity Low_complexity 1 179 0 5 957 473 16 33 0 chr13 48767526 48767587 -71516725 + (GGGA)n Simple_repeat Simple_repeat 2 64 0 5 957 261 0 0 0 chr13 48767954 48767983 -71516329 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 957 186 143 0 0 chr13 48767983 48768018 -71516294 + (CG)n Simple_repeat Simple_repeat 2 36 0 5 957 285 214 0 41 chr13 48768212 48768285 -71516027 + GA-rich Low_complexity Low_complexity 2 71 0 5 957 272 200 0 0 chr13 48768851 48768901 -71515411 + MIR SINE MIR 111 160 -102 5 957 528 238 6 75 chr13 48769005 48769030 -71515282 + ID_B1 SINE B4 66 212 -11 5 957 888 110 0 45 chr13 48769030 48769163 -71515149 + B1_Mus2 SINE Alu 9 135 -12 5 957 195 42 0 0 chr13 48769164 48769188 -71515124 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 957 373 250 21 11 chr13 48769188 48769281 -71515031 - MTD LTR MaLR -300 119 26 5 957 348 248 103 34 chr13 48769323 48769469 -71514843 + L1MB2 LINE L1 5742 5897 -274 5 957 427 319 158 55 chr13 48769597 48769925 -71514387 + MER70A LTR ERVL 42 403 -69 5 957 960 210 80 0 chr13 48770091 48770291 -71514021 - B3 SINE B2 0 216 1 5 957 255 204 0 0 chr13 48770480 48770529 -71513783 - ID_B1 SINE B4 -1 223 175 5 957 738 200 38 13 chr13 48770538 48770695 -71513617 - B3 SINE B2 -40 176 16 5 957 349 284 124 29 chr13 48770692 48770797 -71513515 - ID_B1 SINE B4 -29 195 81 5 957 292 295 0 0 chr13 48772324 48772402 -71511910 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 957 426 290 7 80 chr13 48772402 48772552 -71511760 - B3A SINE B2 -16 182 44 5 957 1155 69 17 11 chr13 48772583 48772758 -71511554 + (TCCC)n Simple_repeat Simple_repeat 3 178 0 5 957 435 233 31 87 chr13 48772804 48772931 -71511381 - B4A SINE B4 -123 169 50 5 957 271 314 117 40 chr13 48772938 48773160 -71511152 + L2b LINE L2 2927 3165 -210 5 957 348 242 12 0 chr13 48773381 48773484 -71510828 - L1M5 LINE L1 -536 5642 5539 5 957 361 265 0 24 chr13 48773504 48773589 -71510723 - ID_B1 SINE B4 -46 178 96 5 957 212 250 149 21 chr13 48773506 48773600 -71510712 - PB1 SINE Alu -21 106 1 5 957 672 184 124 9 chr13 48773883 48774123 -71510189 + RMER19B LTR ERVK 1 336 -566 5 957 1897 136 50 16 chr13 48774119 48774441 -71509871 + RLTR15 LTR ERVK 27 359 0 5 957 209 383 64 0 chr13 48774875 48774969 -71509343 + MER91A DNA Tip100 8 107 -89 5 957 1178 127 26 5 chr13 48775481 48775671 -71508641 - B2_Mm2 SINE B2 0 195 2 5 957 576 242 78 26 chr13 48776195 48776348 -71507964 - B4A SINE B4 -129 163 3 5 957 819 301 111 30 chr13 48777470 48777840 -71506472 - MLT1C LTR MaLR -7 460 61 5 957 997 245 9 19 chr13 48777731 48777947 -71506365 - ID_B1 SINE B4 -2 222 9 5 957 460 342 37 37 chr13 48778039 48778078 -71506234 - MLT1C LTR MaLR -234 233 199 5 957 4523 159 46 75 chr13 48778078 48778869 -71505443 + RMER19B LTR ERVK 1 763 -139 5 957 1181 133 26 21 chr13 48778869 48779061 -71505251 - B2_Mm2 SINE B2 -2 193 1 5 957 4523 159 46 75 chr13 48779061 48779198 -71505114 + RMER19B LTR ERVK 764 902 0 5 957 460 342 37 37 chr13 48779198 48779349 -71504963 - MLT1C LTR MaLR -269 198 43 5 957 315 0 0 0 chr13 48779368 48779403 -71504909 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 957 1140 92 12 0 chr13 48779405 48779568 -71504744 - B2_Mm2 SINE B2 -30 165 1 5 957 873 278 81 54 chr13 48779586 48779890 -71504422 + MTE2b LTR MaLR 36 344 -35 5 957 351 0 0 0 chr13 48779890 48779929 -71504383 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 957 873 278 81 54 chr13 48779929 48779959 -71504353 + MTE2b LTR MaLR 345 378 -1 5 957 340 337 58 40 chr13 48780390 48780563 -71503749 + MLT1H2 LTR MaLR 71 246 -243 5 957 393 271 77 8 chr13 48780714 48780844 -71503468 - B1F1 SINE Alu -2 147 9 5 957 324 0 0 0 chr13 48780980 48781016 -71503296 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 957 408 295 27 61 chr13 48781092 48781240 -71503072 - B4A SINE B4 -149 143 1 5 957 315 103 52 46 chr13 48781264 48781417 -71502895 + CT-rich Low_complexity Low_complexity 1 154 0 5 957 238 301 70 17 chr13 48781850 48781965 -71502347 + L2c LINE L2 3001 3121 -266 5 957 529 316 39 6 chr13 48782894 48783050 -71501262 - RSINE1 SINE B4 -2 163 3 6 957 1347 72 0 0 chr13 48783063 48783243 -71501069 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 957 322 259 112 0 chr13 48783740 48783856 -71500456 - MLT1K LTR MaLR -8 587 459 6 957 516 16 0 0 chr13 48783895 48783956 -71500356 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 957 359 318 50 159 chr13 48784827 48785066 -71499246 - MER58B DNA MER1_type -1 214 2 6 957 1798 238 139 16 chr13 48785931 48786443 -71497869 + Lx8 LINE L1 6573 7147 -326 6 957 700 216 7 7 chr13 48786677 48786817 -71497495 + B3A SINE B2 9 148 -50 6 957 426 127 0 0 chr13 48786817 48786888 -71497424 + (CA)n Simple_repeat Simple_repeat 1 71 0 6 957 602 268 18 30 chr13 48786888 48786916 -71497396 + B3 SINE B2 147 175 -41 6 957 629 146 18 26 chr13 48786937 48787050 -71497262 - PB1D9 SINE Alu 0 120 9 6 957 336 244 22 44 chr13 48786973 48787063 -71497249 - B4 SINE B4 -123 169 82 6 957 24 85 0 0 chr13 48787068 48787127 -71497185 + AT_rich Low_complexity Low_complexity 1 59 0 6 957 210 143 0 0 chr13 48787165 48787200 -71497112 + (CCA)n Simple_repeat Simple_repeat 1 35 0 6 957 270 309 52 31 chr13 48787481 48787578 -71496734 - MER20 DNA MER1_type -68 151 53 6 957 545 290 11 17 chr13 48789038 48789217 -71495095 - MLT1C LTR MaLR -256 211 34 6 957 189 295 231 25 chr13 48791587 48791747 -71492565 - L2b LINE L2 -151 3224 3032 6 957 1836 137 77 114 chr13 48794586 48795014 -71489298 + RMER19B LTR ERVK 1 412 -490 6 957 323 243 162 0 chr13 48796439 48796506 -71487806 - RMER30 DNA MER1_type -32 170 98 6 957 198 0 0 0 chr13 48796506 48796528 -71487784 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 957 323 243 162 0 chr13 48796528 48796571 -71487741 - RMER30 DNA MER1_type -105 97 43 6 957 530 262 158 20 chr13 48797326 48797478 -71486834 - B3 SINE B2 0 216 44 6 957 206 254 65 43 chr13 48797486 48797586 -71486726 - MIR3 SINE MIR -54 154 61 6 957 252 0 0 0 chr13 48797755 48797783 -71486529 + (TAAAA)n Simple_repeat Simple_repeat 1 28 0 6 957 351 0 0 0 chr13 48798317 48798356 -71485956 + (T)n Simple_repeat Simple_repeat 1 39 0 6 957 371 245 0 67 chr13 48798577 48798682 -71485630 + MLT1B LTR MaLR 5 102 -288 6 957 306 0 0 0 chr13 48798698 48798732 -71485580 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 957 678 109 0 0 chr13 48798803 48798904 -71485408 + (TC)n Simple_repeat Simple_repeat 1 101 0 6 957 1063 122 0 0 chr13 48798904 48799051 -71485261 - B1_Mus1 SINE Alu 0 148 2 6 957 1568 159 102 19 chr13 48799051 48799366 -71484946 - ORR1C1 LTR MaLR -37 341 1 6 957 290 178 0 0 chr13 48799368 48799413 -71484899 - PB1D9 SINE Alu -55 65 21 6 957 297 0 0 0 chr13 48800386 48800419 -71483893 + (TA)n Simple_repeat Simple_repeat 1 33 0 6 957 198 91 0 0 chr13 48802117 48802150 -71482162 + (CCCCCG)n Simple_repeat Simple_repeat 4 36 0 6 957 237 217 183 0 chr13 48802495 48802555 -71481757 - ID2 SINE ID -2 81 11 6 957 247 305 62 10 chr13 48802548 48802644 -71481668 - MER58A DNA MER1_type -73 151 51 6 957 688 204 80 7 chr13 48802926 48803064 -71481248 - RSINE1 SINE B4 -14 151 4 6 957 586 267 40 0 chr13 48803076 48803226 -71481086 + MTEa LTR MaLR 1 156 -223 6 957 986 200 103 29 chr13 48803325 48803567 -71480745 + MTEa LTR MaLR 118 377 -2 6 957 189 0 0 0 chr13 48803940 48803961 -71480351 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 957 23 0 0 0 chr13 48804111 48804134 -71480178 + AT_rich Low_complexity Low_complexity 1 23 0 6 957 1226 285 121 28 chr13 48804299 48805102 -71479210 - L1MB4 LINE L1 -106 6074 5206 6 957 893 273 32 76 chr13 48805197 48805538 -71478774 - MTEb LTR MaLR -7 372 47 6 957 492 313 27 6 chr13 48805617 48805800 -71478512 - L1MB4 LINE L1 -980 5166 4980 6 957 310 286 91 10 chr13 48805839 48805938 -71478374 - PB1D10 SINE Alu 0 117 11 6 957 298 296 0 24 chr13 48805960 48806043 -71478269 - ID4 SINE ID 0 83 3 6 957 486 292 90 7 chr13 48806090 48806138 -71478174 - B4A SINE B4 -124 168 111 6 957 324 0 0 0 chr13 48806138 48806174 -71478138 + (TCTG)n Simple_repeat Simple_repeat 1 36 0 6 957 486 292 90 7 chr13 48806174 48806280 -71478032 - B4A SINE B4 -182 110 2 6 957 189 0 0 0 chr13 48806299 48806320 -71477992 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 957 495 270 288 13 chr13 48806429 48806658 -71477654 - B4 SINE B4 0 292 1 6 957 222 303 45 0 chr13 48807148 48807214 -71477098 + B4A SINE B4 42 110 -182 6 957 333 47 0 0 chr13 48807214 48807257 -71477055 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 6 957 445 316 0 0 chr13 48807621 48807738 -71476574 + PB1D10 SINE Alu 1 117 0 6 957 2281 108 41 0 chr13 48808164 48808480 -71475832 + ORR1A4 LTR MaLR 1 329 0 6 957 298 134 30 0 chr13 48808517 48808584 -71475728 + (TG)n Simple_repeat Simple_repeat 1 69 0 6 957 228 287 22 22 chr13 48809297 48809416 -71474896 + (CA)n Simple_repeat Simple_repeat 1 119 0 6 957 207 114 47 81 chr13 48809446 48809532 -71474780 + (CATATA)n Simple_repeat Simple_repeat 1 83 0 6 957 720 156 0 0 chr13 48809558 48809686 -71474626 + (TA)n Simple_repeat Simple_repeat 2 129 0 6 957 348 312 11 39 chr13 48809784 48809964 -71474348 + (CATA)n Simple_repeat Simple_repeat 4 178 0 6 957 420 55 0 0 chr13 48812350 48812405 -71471907 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 957 250 272 49 12 chr13 48813161 48813243 -71471069 + MIR SINE MIR 88 172 -90 6 957 382 250 36 0 chr13 48813568 48813652 -71470660 - RSINE1 SINE B4 -76 89 3 6 957 628 306 31 53 chr13 48813652 48813877 -71470435 - B4A SINE B4 -62 230 11 6 957 728 243 0 0 chr13 48815027 48815167 -71469145 + B1_Mur1 SINE Alu 1 140 -9 6 957 279 173 0 0 chr13 48815167 48815219 -71469093 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 957 423 0 0 0 chr13 48815219 48815266 -71469046 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 957 3576 296 64 20 chr13 48815312 48816521 -71467791 + Lx8 LINE L1 6070 7331 -142 6 957 753 292 21 0 chr13 48816512 48816704 -71467608 - Lx8 LINE L1 -511 6962 6767 6 957 25 83 0 0 chr13 48817180 48817240 -71467072 + AT_rich Low_complexity Low_complexity 1 60 0 6 957 571 350 40 24 chr13 48817684 48817936 -71466376 + RMER15-int LTR ERVL 1972 2227 -2772 6 957 965 294 58 36 chr13 48817933 48818297 -71466015 + RMER15-int LTR ERVL 4222 4593 -406 6 957 351 327 67 58 chr13 48818333 48818557 -71465755 + L1M4 LINE L1 5007 5232 -914 6 957 499 322 26 26 chr13 48818608 48818761 -71465551 + RSINE1 SINE B4 3 155 -10 6 957 344 306 154 18 chr13 48818786 48819072 -71465240 + L1M4 LINE L1 5264 5588 -591 6 957 328 309 30 99 chr13 48819096 48819297 -71465015 + L1M4b LINE L1 17 203 -7131 6 957 244 0 0 53 chr13 48819599 48819637 -71464675 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 6 957 686 300 30 41 chr13 48820032 48820327 -71463985 + B4A SINE B4 1 292 0 6 957 813 271 35 70 chr13 48820452 48820766 -71463546 + L1M4b LINE L1 850 1152 -6182 6 957 508 203 31 39 chr13 48820819 48820947 -71463365 + B3 SINE B2 87 213 -3 6 957 373 286 114 40 chr13 48820954 48821129 -71463183 + L1M4b LINE L1 2527 2714 -4620 6 957 254 191 0 0 chr13 48821238 48821285 -71463027 - B4A SINE B4 -88 204 158 6 957 251 312 73 9 chr13 48821285 48821395 -71462917 + L1M4b LINE L1 5700 5816 -1190 6 957 444 135 0 0 chr13 48821403 48821477 -71462835 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 957 312 157 0 0 chr13 48821498 48821549 -71462763 + B3 SINE B2 2 52 -164 6 957 674 241 0 0 chr13 48821561 48821694 -71462618 + ID_B1 SINE B4 90 222 -2 6 957 399 324 78 55 chr13 48821702 48822096 -71462216 + L1M4b LINE L1 6046 6461 -579 6 957 243 314 0 0 chr13 48822100 48822170 -71462142 - RMER30 DNA MER1_type 0 202 133 6 957 564 62 0 0 chr13 48822257 48822338 -71461974 + (TG)n Simple_repeat Simple_repeat 1 81 0 6 957 873 261 6 103 chr13 48822348 48822660 -71461652 - B4A SINE B4 -8 284 3 6 957 644 285 32 0 chr13 48822790 48822976 -71461336 + B3A SINE B2 1 192 -6 6 957 637 244 95 6 chr13 48823068 48823237 -71461075 + B4A SINE B4 103 286 -6 6 957 1007 133 15 32 chr13 48823253 48823795 -71460517 + (CA)n Simple_repeat Simple_repeat 1 532 0 6 957 300 173 0 19 chr13 48823814 48823867 -71460445 + HAL1-3A_ME LINE L1 1976 2027 -831 6 957 873 96 11 38 chr13 48823956 48824141 -71460171 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 957 256 67 83 0 chr13 48824694 48824754 -71459558 + (GGA)n Simple_repeat Simple_repeat 3 67 0 6 957 422 267 121 0 chr13 48825912 48826077 -71458235 - B3A SINE B2 -7 191 7 6 957 189 0 0 0 chr13 48826753 48826774 -71457538 + (G)n Simple_repeat Simple_repeat 1 21 0 6 957 201 74 0 0 chr13 48828777 48828804 -71455508 + (CCA)n Simple_repeat Simple_repeat 2 28 0 6 957 1174 253 14 28 chr13 48829147 48829436 -71454876 - B4A SINE B4 -6 286 2 6 957 261 0 0 0 chr13 48829444 48829473 -71454839 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 6 957 304 0 34 51 chr13 48829522 48829581 -71454731 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 957 635 236 33 20 chr13 48829581 48829732 -71454580 - B3A SINE B2 -44 154 2 6 957 561 251 193 14 chr13 48831144 48831362 -71452950 + B4A SINE B4 1 257 -35 6 957 189 0 0 0 chr13 48831376 48831397 -71452915 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 957 260 244 49 37 chr13 48831421 48831502 -71452810 - ID4 SINE ID 0 83 2 6 957 228 316 0 30 chr13 48831502 48831603 -71452709 - ID_B1 SINE B4 -3 221 124 6 957 228 337 10 42 chr13 48832215 48832311 -71452001 - RMER4A LTR ERVK -27 439 347 6 957 197 269 138 11 chr13 48832560 48832654 -71451658 + L2 LINE L2 548 653 -2766 6 957 860 292 34 47 chr13 48833334 48833718 -71450594 + L1M4 LINE L1 4981 5359 -787 6 957 567 278 32 19 chr13 48833738 48833896 -71450416 + B3A SINE B2 1 160 -38 6 957 256 336 75 42 chr13 48833908 48834147 -71450165 + L1M4 LINE L1 5535 5781 -393 6 957 533 186 41 0 chr13 48834148 48834245 -71450067 + PB1D7 SINE Alu 1 101 -19 6 957 1043 236 74 117 chr13 48834249 48834305 -71450007 - MTE2b LTR MaLR -2 377 337 6 957 808 244 55 0 chr13 48834305 48834506 -71449806 + B3 SINE B2 1 212 -4 7 957 1043 236 74 117 chr13 48834506 48834843 -71449469 - MTE2b LTR MaLR -43 336 1 6 957 581 227 25 25 chr13 48834848 48834970 -71449342 + ID_B1 SINE B4 79 200 -24 7 957 324 293 0 12 chr13 48836439 48836522 -71447790 + RSINE1 SINE B4 3 84 -81 7 957 239 258 16 16 chr13 48837001 48837064 -71447248 + MLT1L LTR MaLR 333 395 -215 7 957 216 195 0 24 chr13 48837551 48837593 -71446719 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 957 561 259 138 32 chr13 48837619 48837866 -71446446 - B4A SINE B4 -19 273 1 7 957 825 298 59 59 chr13 48839361 48839563 -71444749 + B4 SINE B4 2 211 -81 7 957 994 145 34 88 chr13 48839563 48839767 -71444545 - B2_Mm2 SINE B2 0 195 3 7 957 825 298 59 59 chr13 48839767 48839835 -71444477 + B4 SINE B4 212 272 -20 7 957 186 103 0 0 chr13 48839838 48839867 -71444445 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 957 911 167 0 11 chr13 48839876 48840058 -71444254 + GA-rich Low_complexity Low_complexity 1 180 0 7 957 273 119 0 0 chr13 48840059 48840101 -71444211 + (GGA)n Simple_repeat Simple_repeat 2 43 0 7 957 1676 131 84 99 chr13 48841122 48841356 -71442956 + RMER17C LTR ERVK 1 210 -200 7 957 438 20 0 0 chr13 48841356 48841407 -71442905 + (TC)n Simple_repeat Simple_repeat 1 51 0 7 957 1676 131 84 99 chr13 48841407 48841588 -71442724 + RMER17C LTR ERVK 211 409 -1 7 957 850 166 0 11 chr13 48842636 48842813 -71441499 + CT-rich Low_complexity Low_complexity 4 178 0 7 957 1029 150 0 0 chr13 48842828 48843008 -71441304 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 7 957 312 27 0 0 chr13 48843008 48843045 -71441267 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 7 957 840 164 60 0 chr13 48843045 48843179 -71441133 - B1_Mus1 SINE Alu -5 143 2 7 957 1221 214 189 33 chr13 48843785 48844119 -71440193 - MTD LTR MaLR -4 415 30 7 957 2522 142 29 10 chr13 48844444 48844857 -71439455 - MTC LTR MaLR 0 421 1 7 957 216 0 0 0 chr13 48845149 48845173 -71439139 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 957 1381 223 34 40 chr13 48845173 48845500 -71438812 + MTEa LTR MaLR 9 333 -46 7 957 317 273 8 62 chr13 48845875 48846004 -71438308 - L1M2 LINE L1 -1267 4876 4755 7 957 343 253 12 3 chr13 48846006 48846092 -71438220 - MLT1B LTR MaLR -11 379 278 7 957 369 0 0 0 chr13 48846192 48846233 -71438079 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 957 972 259 13 17 chr13 48846277 48846509 -71437803 - B4A SINE B4 -60 232 2 7 957 295 337 58 29 chr13 48846509 48846667 -71437645 - MLT1B LTR MaLR -227 163 1 7 957 1031 218 101 27 chr13 48846667 48846964 -71437348 - MLT1B-int LTR MaLR 0 1735 1417 7 957 490 262 53 118 chr13 48846971 48847140 -71437172 + RSINE1 SINE B4 8 165 0 7 957 665 148 13 52 chr13 48847140 48847369 -71436943 + (CATA)n Simple_repeat Simple_repeat 1 220 0 7 957 268 250 37 73 chr13 48847496 48847578 -71436734 - LTR16D2 LTR ERVL -353 219 141 7 957 242 321 86 0 chr13 48847712 48847793 -71436519 - MLT1B-int LTR MaLR -968 767 680 7 957 779 280 158 12 chr13 48848116 48848369 -71435943 - B4 SINE B4 0 292 3 7 957 504 303 49 33 chr13 48848830 48849108 -71435204 - MLT1-int LTR MaLR -1200 289 1 7 957 371 198 79 26 chr13 48849248 48849362 -71434950 - ERVL-B4-int LTR ERVL -5580 134 15 7 957 387 284 88 47 chr13 48849362 48849532 -71434780 + MTEa LTR MaLR 1 177 -202 7 957 252 0 0 0 chr13 48849557 48849585 -71434727 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 7 957 189 107 0 0 chr13 48849591 48849619 -71434693 + (CCA)n Simple_repeat Simple_repeat 1 28 0 7 957 816 318 90 7 chr13 48849882 48850183 -71434129 - MLT2B4 LTR ERVL -78 478 153 7 957 1181 321 50 55 chr13 48850162 48850706 -71433606 - ORR1D2-int LTR MaLR -825 545 5 7 957 290 263 49 63 chr13 48850715 48850857 -71433455 - ORR1D2 LTR MaLR -8 362 223 7 957 911 249 5 9 chr13 48850901 48851100 -71433212 + B3A SINE B2 1 186 -30 7 957 298 339 28 0 chr13 48851112 48851221 -71433091 - LTR16C LTR ERVL -147 342 231 7 957 462 269 261 6 chr13 48851449 48851625 -71432687 + ID_B1 SINE B4 1 221 -3 7 957 883 19 0 0 chr13 48851644 48851749 -71432563 + B1_Mm SINE Alu 34 138 -9 7 957 266 0 29 0 chr13 48851749 48851783 -71432529 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 957 236 200 0 16 chr13 48851785 48851846 -71432466 + GA-rich Low_complexity Low_complexity 4 63 0 7 957 210 324 14 0 chr13 48852555 48852626 -71431686 + G-rich Low_complexity Low_complexity 4 75 0 7 957 732 314 164 12 chr13 48852878 48853281 -71431031 - MLT1C LTR MaLR -3 464 1 7 957 188 35 35 0 chr13 48854020 48854049 -71430263 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 7 957 1813 131 58 15 chr13 48854069 48854412 -71429900 + ORR1A4 LTR MaLR 11 394 0 7 957 366 23 0 0 chr13 48855852 48855895 -71428417 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 957 577 242 196 6 chr13 48855896 48856075 -71428237 + ID_B1 SINE B4 3 215 -9 7 957 368 303 256 30 chr13 48856832 48857118 -71427194 - MLT1F LTR MaLR -30 549 167 7 957 410 0 20 0 chr13 48857133 48857183 -71427129 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 957 266 301 155 106 chr13 48857251 48857496 -71426816 + MLT1C LTR MaLR 6 262 -205 7 957 346 345 84 68 chr13 48857514 48857837 -71426475 + ORR1E LTR MaLR 20 347 -12 7 957 250 396 0 46 chr13 48857880 48858031 -71426281 + MLT1C LTR MaLR 287 430 -37 7 957 335 197 0 13 chr13 48859003 48859080 -71425232 - Ricksha_a DNA MuDR -802 379 304 7 957 560 273 99 61 chr13 48859758 48860193 -71424119 - RLTR16 LTR ERVK -75 502 3 7 957 872 265 157 36 chr13 48860286 48860732 -71423580 - ERVL-int LTR ERVL -2312 3445 2946 7 957 869 206 17 23 chr13 48860733 48861001 -71423311 + MTEb LTR MaLR 1 361 -18 7 957 1315 292 77 25 chr13 48861002 48861381 -71422931 - ERVL-int LTR ERVL -2828 2929 2523 7 957 3046 81 8 2 chr13 48861381 48861779 -71422533 + MTB LTR MaLR 1 400 0 7 957 1315 317 85 25 chr13 48861779 48862072 -71422240 - ERVL-int LTR ERVL -3176 2585 2259 7 957 399 213 0 0 chr13 48862488 48862563 -71421749 - ID4 SINE ID -8 75 1 7 957 410 282 38 57 chr13 48862971 48863129 -71421183 - ERVL-B4-int LTR ERVL -5219 495 341 7 957 312 194 113 0 chr13 48863305 48863367 -71420945 - ID4 SINE ID -1 82 14 7 957 381 292 8 8 chr13 48863394 48863515 -71420797 - ERVL-B4-int LTR ERVL -5567 147 27 7 957 592 218 53 0 chr13 48863781 48863914 -71420398 + B1F1 SINE Alu 1 140 -9 7 957 3245 90 0 11 chr13 48864182 48864630 -71419682 - L1_Mus4 LINE L1 0 6636 6194 7 957 749 197 0 50 chr13 48864630 48864769 -71419543 - B3 SINE B2 -84 132 1 7 957 410 280 43 64 chr13 48864804 48864945 -71419367 - RSINE1 SINE B4 -25 140 3 7 957 380 290 117 31 chr13 48864948 48865076 -71419236 - B1F1 SINE Alu -5 144 6 7 957 438 367 19 0 chr13 48865156 48865314 -71418998 + MLT1G LTR MaLR 428 588 -3 7 957 464 331 158 12 chr13 48865696 48866204 -71418108 + L1MB3 LINE L1 281 862 -6004 7 957 459 0 0 0 chr13 48866321 48866372 -71417940 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 957 302 266 63 91 chr13 48866398 48866715 -71417597 + L1MB3 LINE L1 1162 1478 -5388 7 957 391 281 30 68 chr13 48866717 48866843 -71417469 + B1F SINE Alu 1 126 -23 7 957 435 52 0 0 chr13 48866843 48866901 -71417411 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 957 391 271 31 71 chr13 48866901 48866927 -71417385 + B1F SINE Alu 127 148 -1 7 957 505 254 107 45 chr13 48866944 48867233 -71417079 + L1MB3 LINE L1 1470 1776 -5558 7 957 506 130 13 13 chr13 48867369 48867447 -71416865 - B3 SINE B2 -137 79 2 7 957 796 151 118 34 chr13 48867470 48867648 -71416664 + ORR1B2 LTR MaLR 1 193 -174 7 957 532 259 129 36 chr13 48867676 48867847 -71416465 - RLTR12B LTR ERVK -37 322 126 7 957 261 0 0 0 chr13 48867847 48867876 -71416436 + (CCA)n Simple_repeat Simple_repeat 3 31 0 7 957 564 292 74 52 chr13 48867876 48868128 -71416184 - RLTR12B LTR ERVK -267 261 2 7 957 860 152 32 55 chr13 48868130 48868378 -71415934 + ORR1B2 LTR MaLR 142 367 0 7 957 705 260 22 43 chr13 48868544 48868729 -71415583 + B3A SINE B2 1 181 -17 7 957 204 158 0 0 chr13 48868736 48868774 -71415538 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 957 25 31 0 0 chr13 48868782 48868814 -71415498 + AT_rich Low_complexity Low_complexity 1 32 0 7 957 675 230 7 45 chr13 48868879 48869034 -71415278 + B1F SINE Alu 1 149 0 7 957 391 189 74 0 chr13 48869053 48869148 -71415164 + L1MB3 LINE L1 4983 5084 -1916 7 957 30 0 0 0 chr13 48869200 48869230 -71415082 + AT_rich Low_complexity Low_complexity 1 30 0 7 957 261 119 0 0 chr13 48869240 48869282 -71415030 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 957 1147 112 6 17 chr13 48869327 48869485 -71414827 + B2_Mm2 SINE B2 1 158 -37 7 957 324 0 0 0 chr13 48869485 48869521 -71414791 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 7 957 1147 112 6 17 chr13 48869521 48869534 -71414778 + B2_Mm2 SINE B2 159 170 -25 7 957 806 309 75 29 chr13 48869534 48870285 -71414027 + L1MB3 LINE L1 5118 5920 -1086 7 957 667 258 6 18 chr13 48870376 48870542 -71413770 + RSINE1 SINE B4 2 165 0 7 957 1138 335 49 37 chr13 48870583 48871402 -71412910 + L1MB3 LINE L1 6123 6952 -91 7 957 432 0 0 0 chr13 48871403 48871451 -71412861 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 957 481 314 77 89 chr13 48871461 48871720 -71412592 - B4A SINE B4 -8 284 29 7 957 906 154 14 7 chr13 48871734 48871878 -71412434 - B1_Mur2 SINE Alu 0 149 5 7 957 3660 167 28 38 chr13 48871902 48872646 -71411666 + RMER1B Other Other 4 1057 -9 7 957 297 0 0 0 chr13 48872691 48872724 -71411588 + (TTA)n Simple_repeat Simple_repeat 1 33 0 7 957 694 200 21 7 chr13 48872726 48872867 -71411445 - B2_Mm2 SINE B2 -31 164 22 7 957 754 138 5 2 chr13 48872869 48872992 -71411320 + B1_Mus2 SINE Alu 24 150 0 7 957 1041 289 138 4 chr13 48873576 48874038 -71410274 + Lx8 LINE L1 6815 7338 -135 7 957 682 243 144 0 chr13 48874209 48874390 -71409922 + ID_B1 SINE B4 3 209 -15 7 957 514 166 19 32 chr13 48874420 48874576 -71409736 + GA-rich Low_complexity Low_complexity 2 155 0 7 957 917 101 5 38 chr13 48874582 48874767 -71409545 + (GGA)n Simple_repeat Simple_repeat 2 180 0 7 957 1347 72 0 0 chr13 48874767 48874947 -71409365 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 957 230 32 0 31 chr13 48874947 48874979 -71409333 + (GAA)n Simple_repeat Simple_repeat 1 31 0 7 957 380 279 75 60 chr13 48876696 48877007 -71407305 + MLT1G LTR MaLR 20 391 -200 7 957 830 260 144 4 chr13 48877191 48877469 -71406843 - MLT1A1 LTR MaLR -3 405 89 7 957 696 285 35 75 chr13 48877559 48877593 -71406719 - B4A SINE B4 0 292 271 7 957 411 56 0 0 chr13 48877593 48877647 -71406665 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 957 696 267 16 88 chr13 48877647 48877893 -71406419 - B4A SINE B4 -22 270 29 7 957 195 340 0 0 chr13 48878841 48878888 -71405424 - L2b LINE L2 -203 3172 3126 8 957 305 323 136 35 chr13 48879721 48879920 -71404392 - L1MC LINE L1 -853 5480 5262 8 957 527 261 6 19 chr13 48880234 48880394 -71403918 - L1MD2 LINE L1 -345 6405 6248 8 957 461 269 28 14 chr13 48880433 48880576 -71403736 + B1F SINE Alu 1 145 -4 8 957 334 104 0 0 chr13 48880626 48880674 -71403638 - HAL1-3A_ME LINE L1 -835 2023 1976 8 957 479 173 28 34 chr13 48880719 48880898 -71403414 + (TG)n Simple_repeat Simple_repeat 1 178 0 8 957 686 246 150 26 chr13 48880909 48881143 -71403169 - B4A SINE B4 0 292 30 8 957 327 253 116 37 chr13 48881574 48881738 -71402574 - L1MD2 LINE L1 -934 5603 5427 8 957 521 270 58 26 chr13 48881884 48882040 -71402272 - RSINE1 SINE B4 -2 163 3 8 957 846 217 69 0 chr13 48882166 48882341 -71401971 + B3A SINE B2 1 187 -11 8 957 22 35 0 0 chr13 48882351 48882380 -71401932 + AT_rich Low_complexity Low_complexity 1 29 0 8 957 428 281 8 0 chr13 48882415 48882536 -71401776 - L1MD2 LINE L1 -1227 5310 5189 8 957 599 306 81 109 chr13 48882632 48883101 -71401211 - MLT1C LTR MaLR -8 459 4 8 957 529 329 76 32 chr13 48883114 48883463 -71400849 - L1MD2 LINE L1 -1478 5059 4697 8 957 886 165 198 6 chr13 48883463 48883640 -71400672 - B3 SINE B2 -5 211 1 8 957 529 329 76 32 chr13 48883640 48883752 -71400560 - L1MD2 LINE L1 -1841 4696 4578 8 957 261 0 0 0 chr13 48883774 48883803 -71400509 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 957 571 327 13 4 chr13 48883805 48884032 -71400280 - L1MD2 LINE L1 -2084 4453 4225 8 957 249 370 0 0 chr13 48884174 48884255 -71400057 + ID4_ SINE ID 3 83 0 8 957 333 0 0 0 chr13 48884366 48884403 -71399909 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 8 957 538 212 10 10 chr13 48884404 48884504 -71399808 - B1_Mur2 SINE Alu -8 141 42 8 957 264 0 0 159 chr13 48884507 48884639 -71399673 + (CTCTG)n Simple_repeat Simple_repeat 5 115 0 8 957 246 200 0 39 chr13 48884640 48884692 -71399620 - PB1D9 SINE Alu -61 59 10 8 957 526 272 171 9 chr13 48884698 48885115 -71399197 - L1MD2 LINE L1 -3227 3310 2799 8 957 368 310 115 39 chr13 48885123 48885435 -71398877 - L1MD2 LINE L1 -4674 1959 1624 8 957 247 283 168 7 chr13 48885547 48885764 -71398548 - L1MC LINE L1 -2050 4096 3843 8 957 1927 122 17 111 chr13 48885823 48886105 -71398207 + ORR1A2 LTR MaLR 1 269 -57 8 957 1247 54 0 0 chr13 48886105 48886252 -71398060 + B1_Mm SINE Alu 1 147 0 8 957 1927 122 17 111 chr13 48886252 48886329 -71397983 + ORR1A2 LTR MaLR 270 326 0 8 957 1285 122 526 10 chr13 48886329 48886724 -71397588 + ORR1A2-int LTR MaLR 1 605 -1187 8 957 448 278 50 129 chr13 48886623 48886678 -71397634 + RLTR25A LTR ERVK 446 575 -528 8 957 653 141 20 141 chr13 48886678 48886799 -71397513 + MT2B LTR ERVL 157 259 -342 8 957 435 238 0 0 chr13 48886799 48886883 -71397429 + B1_Mur3 SINE Alu 3 86 -63 8 957 448 278 50 129 chr13 48886827 48886863 -71397449 + RLTR25A LTR ERVK 576 666 -437 8 957 4804 156 80 9 chr13 48886882 48887725 -71396587 + RMER19B LTR ERVK 1 902 0 8 957 7524 78 42 43 chr13 48887741 48888860 -71395452 + ORR1A2-int LTR MaLR 846 1963 0 8 957 2291 93 55 0 chr13 48888860 48889170 -71395142 + ORR1A2 LTR MaLR 1 327 0 8 957 293 309 176 9 chr13 48889273 48889381 -71394931 - RSINE1 SINE B4 -15 150 25 8 957 330 319 61 13 chr13 48889395 48889624 -71394688 - L1MC LINE L1 -2481 3665 3425 8 957 23 0 0 0 chr13 48889766 48889789 -71394523 + AT_rich Low_complexity Low_complexity 1 23 0 8 119 305 232 159 9 chr13 48889851 48889964 -71394348 - B4A SINE B4 -14 278 149 8 958 608 190 112 155 chr13 48890086 48890292 -71394020 - B3A SINE B2 0 198 2 8 958 196 72 0 67 chr13 48890359 48890404 -71393908 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 8 958 1256 41 0 0 chr13 48890547 48890692 -71393620 + B1_Mm SINE Alu 3 147 0 8 958 964 218 55 0 chr13 48892901 48893103 -71391209 + ID_B1 SINE B4 3 215 -9 8 958 363 73 0 0 chr13 48893196 48893251 -71391061 + (A)n Simple_repeat Simple_repeat 1 55 0 8 958 196 271 34 0 chr13 48893432 48893491 -71390821 - MIRb SINE MIR -87 181 121 8 958 477 0 0 0 chr13 48893837 48893890 -71390422 + (GGA)n Simple_repeat Simple_repeat 1 53 0 8 958 211 277 87 19 chr13 48894501 48894604 -71389708 + L2b LINE L2 2966 3075 -300 8 958 21 0 0 0 chr13 48897267 48897288 -71387024 + AT_rich Low_complexity Low_complexity 1 21 0 8 958 240 35 0 0 chr13 48897288 48897317 -71386995 + (GA)n Simple_repeat Simple_repeat 2 30 0 8 958 316 259 15 15 chr13 48899901 48900038 -71384274 + (TGG)n Simple_repeat Simple_repeat 1 137 0 8 958 708 12 0 0 chr13 48900220 48900301 -71384011 + (GGGGA)n Simple_repeat Simple_repeat 2 82 0 8 958 334 258 0 53 chr13 48902439 48902533 -71381779 + L1MB2 LINE L1 5784 5872 -299 8 958 694 184 64 35 chr13 48902721 48902862 -71381450 - B1_Mur2 SINE Alu 0 149 5 8 958 192 40 0 0 chr13 48903833 48903858 -71380454 + (CA)n Simple_repeat Simple_repeat 1 25 0 8 958 271 377 13 0 chr13 48903913 48904067 -71380245 + C-rich Low_complexity Low_complexity 3 158 0 8 958 423 0 0 0 chr13 48904167 48904214 -71380098 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 958 204 291 89 0 chr13 48904659 48904738 -71379574 - MER5B DNA MER1_type -6 172 87 8 958 248 300 109 6 chr13 48907497 48907621 -71376691 + MIR SINE MIR 39 182 -94 8 958 796 91 189 0 chr13 48907824 48907967 -71376345 + B2_Mm1t SINE B2 2 171 -22 8 958 290 124 392 0 chr13 48908022 48908129 -71376183 + B2_Mm2 SINE B2 47 195 0 8 958 436 305 30 0 chr13 48912031 48912198 -71372114 + (TCCA)n Simple_repeat Simple_repeat 2 173 0 8 958 589 256 16 0 chr13 48918978 48919103 -71365209 + MTD LTR MaLR 1 127 -294 8 958 1037 181 161 13 chr13 48919232 48919487 -71364825 + MTD LTR MaLR 126 403 -16 8 958 691 325 102 19 chr13 48919674 48920035 -71364277 + MER54A LTR ERVL 35 425 -476 8 958 229 267 29 10 chr13 48920876 48920978 -71363334 + (TG)n Simple_repeat Simple_repeat 1 104 0 8 958 228 258 76 33 chr13 48921797 48921889 -71362423 + MER53 DNA hAT 8 103 -90 8 958 396 297 121 95 chr13 48921925 48922230 -71362082 + ORR1E LTR MaLR 35 347 -12 8 958 975 113 14 21 chr13 48922847 48922991 -71361321 + B1_Mur4 SINE Alu 2 144 -6 8 958 213 39 0 0 chr13 48923048 48923074 -71361238 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 958 437 305 82 67 chr13 48923079 48923346 -71360966 - B4 SINE B4 -4 288 34 8 958 231 328 15 0 chr13 48923408 48923475 -71360837 - RMER30 DNA MER1_type -2 200 133 8 958 216 0 0 0 chr13 48923676 48923700 -71360612 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 8 958 456 174 23 0 chr13 48923746 48923832 -71360480 + B1_Mur1 SINE Alu 44 131 -18 8 958 1475 252 109 24 chr13 48924715 48925026 -71359286 + L1MB7 LINE L1 4602 4946 -1200 8 958 333 0 0 0 chr13 48925026 48925063 -71359249 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 958 1475 252 109 24 chr13 48925063 48925373 -71358939 + L1MB7 LINE L1 4947 5276 -870 8 958 353 316 7 70 chr13 48925392 48925499 -71358813 + B3A SINE B2 83 184 -14 8 958 354 45 0 0 chr13 48925499 48925543 -71358769 + (CATA)n Simple_repeat Simple_repeat 2 45 0 8 958 335 316 7 70 chr13 48925543 48925578 -71358734 + B3 SINE B2 183 216 0 8 958 356 167 14 0 chr13 48925746 48925818 -71358494 + GA-rich Low_complexity Low_complexity 3 75 0 8 958 1143 278 101 83 chr13 48925899 48926713 -71357599 + L1MB7 LINE L1 5325 6152 -32 8 958 364 200 23 23 chr13 48926819 48926906 -71357406 + L1MCa LINE L1 1586 1672 -4836 8 958 315 295 50 74 chr13 48928297 48928580 -71355732 + MLT1A LTR MaLR 185 465 -2 8 958 243 0 0 0 chr13 48929999 48930026 -71354286 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 958 858 294 51 12 chr13 48931719 48931974 -71352338 + B4 SINE B4 1 265 -27 8 958 598 295 110 8 chr13 48932040 48932286 -71352026 + L1MB8 LINE L1 3171 3441 -2705 8 958 695 249 18 30 chr13 48932451 48932617 -71351695 + RSINE1 SINE B4 2 165 0 8 958 214 300 100 0 chr13 48932760 48932830 -71351482 - ID4_ SINE ID -5 78 2 8 958 631 288 50 0 chr13 48932830 48933049 -71351263 + L1MB8 LINE L1 3624 3853 -2293 8 958 295 243 3 14 chr13 48933241 48933325 -71350987 + L1MD LINE L1 3837 3950 -2196 8 958 654 206 71 0 chr13 48933352 48933478 -71350834 - B1_Mus2 SINE Alu -12 135 1 8 958 189 0 0 0 chr13 48933484 48933505 -71350807 + (A)n Simple_repeat Simple_repeat 1 21 0 8 958 804 318 38 12 chr13 48933512 48933856 -71350456 + L1MB8 LINE L1 3957 4309 -1837 8 958 506 244 40 30 chr13 48933976 48934175 -71350137 + L1MB8 LINE L1 4626 4826 -1314 8 958 206 118 0 0 chr13 48934202 48934236 -71350076 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 958 371 337 60 18 chr13 48934269 48934435 -71349877 - B4A SINE B4 -1 291 119 8 958 575 290 14 23 chr13 48934435 48934654 -71349658 + L1MB8 LINE L1 4962 5178 -968 8 958 614 294 95 5 chr13 48934658 48934880 -71349432 + Lx8 LINE L1 7123 7364 -109 8 958 180 111 0 0 chr13 48934944 48934971 -71349341 + (GA)n Simple_repeat Simple_repeat 1 27 0 8 958 780 269 101 15 chr13 48934986 48935440 -71348872 + L1MB8 LINE L1 5154 5656 -518 8 958 311 311 106 18 chr13 48935577 48935747 -71348565 + L1MB8 LINE L1 5823 6007 -171 8 958 1472 70 27 0 chr13 48936727 48936914 -71347398 + B2_Mm1a SINE B2 2 193 0 8 958 592 250 20 20 chr13 48937005 48937152 -71347160 + B1F2 SINE Alu 3 149 0 8 958 483 347 30 82 chr13 48937557 48937924 -71346388 - ORR1E LTR MaLR -3 356 9 8 958 440 117 0 13 chr13 48938010 48938088 -71346224 + (TG)n Simple_repeat Simple_repeat 1 77 0 8 958 632 275 223 61 chr13 48938108 48938350 -71345962 - B4A SINE B4 -4 288 8 8 958 738 114 19 0 chr13 48938576 48938681 -71345631 + PB1D9 SINE Alu 5 111 -9 8 958 526 280 6 87 chr13 48939189 48939361 -71344951 + RSINE1 SINE B4 8 165 0 8 958 331 293 55 35 chr13 48939364 48939509 -71344803 + L1MC2 LINE L1 2121 2268 -4925 8 958 216 86 0 0 chr13 48939705 48939740 -71344572 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 8 958 884 128 0 33 chr13 48939742 48939895 -71344417 - B1_Mus1 SINE Alu 0 148 1 8 958 622 263 0 0 chr13 48939898 48940035 -71344277 - ID_B1 SINE B4 -2 222 86 8 958 422 242 19 50 chr13 48939905 48940066 -71344246 + YREP_Mm Unknown Unknown 186 341 -1471 8 958 357 277 8 0 chr13 48940079 48940198 -71344114 + L1MC2 LINE L1 2350 2469 -4724 8 958 1208 56 0 0 chr13 48940215 48940358 -71343954 + B1_Mus2 SINE Alu 2 144 -3 8 958 504 264 24 55 chr13 48940386 48940550 -71343762 - RSINE1 SINE B4 -5 160 2 8 958 245 248 319 14 chr13 48940550 48940774 -71343538 + L1MC2 LINE L1 2513 2803 -4390 8 958 979 220 170 22 chr13 48940779 48941091 -71343221 - ORR1E LTR MaLR -1 358 1 8 958 902 250 40 13 chr13 48941233 48941460 -71342852 + B4A SINE B4 35 267 -25 8 958 438 69 0 0 chr13 48941583 48941641 -71342671 + (GGA)n Simple_repeat Simple_repeat 2 59 0 8 958 300 252 0 0 chr13 48941641 48941725 -71342587 + L1MC2 LINE L1 3064 3134 -3872 8 958 1255 296 114 26 chr13 48941774 48942715 -71341597 + L1MC2 LINE L1 5939 6972 -232 8 958 421 317 119 65 chr13 48942715 48942992 -71341320 + B4 SINE B4 1 292 0 8 958 727 148 22 11 chr13 48943019 48943197 -71341115 + (CATA)n Simple_repeat Simple_repeat 1 180 0 8 958 210 150 0 0 chr13 48943198 48943238 -71341074 + (CA)n Simple_repeat Simple_repeat 1 40 0 9 958 1356 170 19 0 chr13 48943284 48943496 -71340816 + B3 SINE B2 1 216 0 9 958 285 350 61 22 chr13 48943521 48943702 -71340610 + L1MC2 LINE L1 6991 7178 -26 8 958 278 289 36 12 chr13 48943717 48943801 -71340511 + PB1D10 SINE Alu 2 87 -30 9 958 292 297 0 0 chr13 48943806 48943880 -71340432 + ID4 SINE ID 2 75 -8 9 958 720 115 0 0 chr13 48944321 48944434 -71339878 + (CAGG)n Simple_repeat Simple_repeat 3 115 0 9 958 192 97 0 0 chr13 48945247 48945278 -71339034 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 9 958 266 192 31 70 chr13 48945281 48945410 -71338902 + (CATATA)n Simple_repeat Simple_repeat 1 124 0 9 958 212 225 79 0 chr13 48945469 48945558 -71338754 + (CATA)n Simple_repeat Simple_repeat 4 99 0 9 958 360 0 0 0 chr13 48946186 48946226 -71338086 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 958 279 0 0 0 chr13 48946273 48946304 -71338008 + (CA)n Simple_repeat Simple_repeat 1 31 0 9 958 921 228 64 11 chr13 48946374 48946640 -71337672 + B4A SINE B4 3 282 -10 9 958 295 256 180 101 chr13 48946767 48946789 -71337523 + B4 SINE B4 73 220 -70 9 958 656 130 183 0 chr13 48946789 48946904 -71337408 + B1_Mur4 SINE Alu 9 144 -6 9 958 447 19 0 0 chr13 48947872 48947924 -71336388 + (TC)n Simple_repeat Simple_repeat 2 53 0 9 958 537 58 0 0 chr13 48947924 48947992 -71336320 + (TG)n Simple_repeat Simple_repeat 2 70 0 9 958 341 269 57 0 chr13 48948006 48948111 -71336201 - PB1D7 SINE Alu 0 120 1 9 958 216 272 159 95 chr13 48948111 48948154 -71336158 - B4 SINE B4 -188 104 54 9 958 507 213 81 71 chr13 48948158 48948455 -71335857 + RMER10A LTR ERVL 47 426 -16 9 958 31 0 0 0 chr13 48948557 48948588 -71335724 + AT_rich Low_complexity Low_complexity 1 31 0 9 958 316 319 25 0 chr13 48948643 48948762 -71335550 - L1ME4a LINE L1 -242 5882 5761 9 958 943 209 50 10 chr13 48950105 48950303 -71334009 + B3 SINE B2 2 207 -9 9 958 551 223 57 78 chr13 48951879 48952020 -71332292 + ID_B1 SINE B4 86 223 -1 9 958 31 0 0 0 chr13 48952566 48952597 -71331715 + GC_rich Low_complexity Low_complexity 1 31 0 9 958 704 284 86 0 chr13 48953283 48953445 -71330867 - B3A SINE B2 -22 176 1 9 958 345 254 28 0 chr13 48956263 48956334 -71327978 + ID4_ SINE ID 1 73 -10 9 958 654 276 87 108 chr13 48956395 48956867 -71327445 + L1MB5 LINE L1 4407 4868 -1278 9 958 257 250 62 12 chr13 48956900 48956981 -71327331 + PB1D9 SINE Alu 33 117 -3 9 958 598 237 87 111 chr13 48956989 48957241 -71327071 + B4A SINE B4 1 246 -46 9 958 573 115 0 0 chr13 48957254 48957341 -71326971 + (GA)n Simple_repeat Simple_repeat 2 88 0 9 958 516 246 51 26 chr13 48957622 48957714 -71326598 + RSINE1 SINE B4 27 124 -41 9 958 381 22 0 0 chr13 48957714 48957760 -71326552 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 958 516 246 51 26 chr13 48957760 48957784 -71326528 + RSINE1 SINE B4 125 146 -19 9 958 884 195 0 13 chr13 48957816 48957967 -71326345 + B1_Mur1 SINE Alu 1 149 0 9 958 752 264 0 12 chr13 48958024 48958189 -71326123 + RSINE1 SINE B4 3 165 0 9 958 209 159 23 0 chr13 48958189 48958233 -71326079 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 958 325 305 46 63 chr13 48958332 48958699 -71325613 + L1MB5 LINE L1 4973 5333 -813 9 958 746 253 26 0 chr13 48958702 48958856 -71325456 + RSINE1 SINE B4 4 161 -4 9 958 250 235 11 86 chr13 48959014 48959107 -71325205 + L1MB5 LINE L1 5424 5509 -669 9 958 735 336 81 28 chr13 48959125 48959618 -71324694 + L1MB5 LINE L1 5572 6090 -84 9 958 1016 214 29 0 chr13 48960866 48961076 -71323236 + B3 SINE B2 1 216 0 9 958 285 265 37 93 chr13 48961482 48961590 -71322722 + MT2B2 LTR ERVL 139 240 -344 9 958 295 217 242 73 chr13 48961498 48961518 -71322794 + ID_B1 SINE B4 78 222 -2 9 958 478 240 10 0 chr13 48961518 48961622 -71322690 + PB1D10 SINE Alu 11 115 -2 9 958 843 86 0 0 chr13 48961627 48961744 -71322568 + (GGAA)n Simple_repeat Simple_repeat 4 120 0 9 958 195 42 0 0 chr13 48963054 48963078 -71321234 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 958 942 177 0 7 chr13 48963078 48963220 -71321092 - B1_Mus1 SINE Alu -6 142 1 9 958 402 209 44 0 chr13 48963220 48963311 -71321001 + MER113 DNA MER1_type 303 397 -124 9 958 27 29 0 0 chr13 48963543 48963577 -71320735 + AT_rich Low_complexity Low_complexity 1 34 0 9 958 399 248 239 0 chr13 48963584 48963701 -71320611 - RSINE1 SINE B4 -17 148 4 9 958 622 235 0 35 chr13 48963709 48963850 -71320462 - ID_B1 SINE B4 -5 219 84 9 958 37 52 0 0 chr13 48965655 48965713 -71318599 + GC_rich Low_complexity Low_complexity 1 58 0 9 958 46 78 0 0 chr13 48965930 48966032 -71318280 + GC_rich Low_complexity Low_complexity 1 102 0 9 958 240 176 57 29 chr13 48966139 48966170 -71318142 + (CGCGG)n Simple_repeat Simple_repeat 5 35 0 9 958 204 40 0 0 chr13 48966170 48966195 -71318117 + (CCGGG)n Simple_repeat Simple_repeat 1 25 0 9 958 240 176 57 29 chr13 48966195 48966303 -71318009 + (CGCGG)n Simple_repeat Simple_repeat 2 114 0 9 958 246 194 32 0 chr13 48966203 48966265 -71318047 + G-rich Low_complexity Low_complexity 5 68 0 9 958 37 86 0 0 chr13 48966313 48966406 -71317906 + GC_rich Low_complexity Low_complexity 1 93 0 9 958 32 108 0 0 chr13 48966422 48966552 -71317760 + GC_rich Low_complexity Low_complexity 1 130 0 9 958 273 29 0 0 chr13 48967172 48967206 -71317106 + (TTGG)n Simple_repeat Simple_repeat 3 36 0 9 958 204 281 62 0 chr13 48967809 48967873 -71316439 - MIRb SINE MIR -93 175 108 9 958 188 275 0 0 chr13 48968224 48968264 -71316048 - MIRm SINE MIR -13 263 224 9 958 544 217 122 7 chr13 48968849 48968988 -71315324 - RSINE1 SINE B4 -9 156 2 9 958 331 182 144 9 chr13 48969093 48969204 -71315108 - L1M4 LINE L1 -1382 4764 4639 9 958 717 243 76 16 chr13 48969233 48969417 -71314895 + B3A SINE B2 1 195 -3 9 958 1308 87 22 11 chr13 48969417 48969601 -71314711 - B2_Mm2 SINE B2 -8 187 1 9 958 1003 116 13 26 chr13 48969631 48969782 -71314530 + B1_Mur4 SINE Alu 2 150 0 9 958 234 91 0 0 chr13 48969782 48969815 -71314497 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 9 958 398 301 56 70 chr13 48969842 48969985 -71314327 + RSINE1 SINE B4 25 165 0 9 958 384 22 0 0 chr13 48970064 48970109 -71314203 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 9 958 308 287 164 9 chr13 48970402 48970518 -71313794 - RSINE1 SINE B4 -29 136 3 9 958 881 216 97 5 chr13 48970561 48970756 -71313556 - B3 SINE B2 0 216 4 9 958 415 340 59 0 chr13 48970796 48970949 -71313363 - ID_B1 SINE B4 -57 167 6 9 958 281 203 29 0 chr13 48971033 48971102 -71313210 - L1M4 LINE L1 -1795 4345 4275 9 958 752 241 43 86 chr13 48971822 48972170 -71312142 - MLT1C LTR MaLR -22 368 48 9 958 183 161 32 0 chr13 48973304 48973335 -71310977 - L4 LINE RTE -195 1834 1803 9 958 300 191 162 0 chr13 48977584 48977652 -71306660 - ID4_ SINE ID -4 79 1 9 958 388 230 0 0 chr13 48977753 48977827 -71306485 + B3 SINE B2 57 130 -86 9 958 1265 28 0 0 chr13 48977883 48978028 -71306284 + B1_Mus1 SINE Alu 4 148 0 9 958 340 326 152 11 chr13 48978054 48978330 -71305982 + L1MC1 LINE L1 5998 6312 -21 9 958 673 217 42 0 chr13 48978354 48978497 -71305815 + B1F1 SINE Alu 1 149 0 9 958 1262 41 0 0 chr13 48978497 48978642 -71305670 + B1_Mus2 SINE Alu 1 146 -1 9 958 31 26 0 0 chr13 48978643 48978681 -71305631 + AT_rich Low_complexity Low_complexity 1 38 0 9 958 463 254 98 15 chr13 48978950 48979082 -71305230 + B1_Mur2 SINE Alu 5 147 -2 9 958 246 351 14 78 chr13 48979446 48979588 -71304724 + LTR81B LTR ERV1? 161 293 -1100 9 958 225 0 0 0 chr13 48979756 48979781 -71304531 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 958 588 226 171 0 chr13 48980076 48980257 -71304055 + B3 SINE B2 1 212 -4 9 958 727 143 0 0 chr13 48980257 48980362 -71303950 + B1_Mur2 SINE Alu 33 137 -12 9 958 207 0 0 0 chr13 48980362 48980385 -71303927 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 9 958 596 183 0 94 chr13 48980385 48980406 -71303906 + B1_Mus2 SINE Alu 136 147 0 9 958 24 0 0 0 chr13 48980965 48980989 -71303323 + AT_rich Low_complexity Low_complexity 1 24 0 9 958 214 143 20 20 chr13 48981251 48981301 -71303011 + A-rich Low_complexity Low_complexity 6 55 0 9 958 782 188 0 22 chr13 48981484 48981620 -71302692 - B1_Mur2 SINE Alu 0 149 17 9 958 431 219 52 0 chr13 48981674 48981770 -71302542 + PB1D7 SINE Alu 10 110 -10 9 958 540 252 0 32 chr13 48981811 48981934 -71302378 + RSINE1 SINE B4 27 145 -20 9 958 241 274 196 21 chr13 48982233 48982330 -71301982 - PB1D10 SINE Alu -3 114 1 9 958 440 212 239 0 chr13 48982661 48982774 -71301538 - B1_Mur1 SINE Alu -7 142 3 9 958 297 51 0 0 chr13 48982831 48982870 -71301442 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 9 958 464 280 2 2 chr13 48982871 48982979 -71301333 - B1F2 SINE Alu -2 147 39 9 958 1473 192 163 32 chr13 48982997 48983462 -71300850 - Lx6 LINE L1 0 7696 6927 9 958 227 254 14 113 chr13 48983462 48983533 -71300779 - B1_Mus2 SINE Alu -83 64 1 9 958 380 314 98 65 chr13 48985437 48985621 -71298691 - B3A SINE B2 0 198 9 9 958 453 36 0 0 chr13 48986023 48986078 -71298234 + (GA)n Simple_repeat Simple_repeat 2 56 0 9 958 1219 169 10 0 chr13 48986268 48986475 -71297837 + MTC LTR MaLR 7 215 -206 9 958 3129 156 58 9 chr13 48986485 48987034 -71297278 - RMER4B LTR ERVK 0 585 10 9 958 685 226 157 0 chr13 48987027 48987186 -71297126 + MTC LTR MaLR 238 421 0 9 958 485 178 79 12 chr13 48989000 48989165 -71295147 + RMER17C LTR ERVK 98 273 -137 9 958 270 0 0 0 chr13 48989165 48989195 -71295117 + (GA)n Simple_repeat Simple_repeat 1 30 0 9 958 299 265 29 14 chr13 48989444 48989513 -71294799 + ID SINE ID 2 71 -153 1 958 256 245 135 21 chr13 48989654 48989750 -71294562 - PB1 SINE Alu -4 123 17 1 958 456 67 0 0 chr13 48989809 48989869 -71294443 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 958 904 129 0 41 chr13 48989869 48990003 -71294309 - B1_Mus1 SINE Alu -9 139 10 1 958 751 236 160 17 chr13 48990012 48990193 -71294119 - B3 SINE B2 -3 213 7 1 958 297 302 17 117 chr13 48993346 48993466 -71290846 + B1_Mur2 SINE Alu 3 110 -39 1 958 278 325 139 6 chr13 48993725 48993883 -71290429 + Charlie2b DNA MER1_type 1864 2042 -740 1 958 323 131 395 23 chr13 48994263 48994349 -71289963 + PB1D9 SINE Alu 2 119 -1 1 958 606 207 55 41 chr13 48995174 48995320 -71288992 + B1_Mur1 SINE Alu 1 148 -1 1 958 498 250 0 9 chr13 48995599 48995708 -71288604 - PB1D10 SINE Alu -8 109 2 1 958 601 193 8 28 chr13 48995721 48995870 -71288442 - B1_Mur4 SINE Alu -9 140 1 1 958 476 256 164 116 chr13 48996579 48996950 -71287362 + MTD LTR MaLR 24 412 -7 1 958 303 243 14 41 chr13 48997081 48997154 -71287158 + B4A SINE B4 219 289 -3 1 958 229 319 95 21 chr13 48997875 48998064 -71286248 + MER63C DNA AcHobo 372 574 -356 1 958 207 174 42 28 chr13 49000278 49000349 -71283963 + (TTATA)n Simple_repeat Simple_repeat 3 74 0 1 958 183 42 0 0 chr13 49001353 49001377 -71282935 + (T)n Simple_repeat Simple_repeat 1 24 0 2 958 1176 68 0 0 chr13 49001377 49001525 -71282787 - B1_Mus1 SINE Alu 0 148 1 3 958 358 268 25 51 chr13 49001896 49002014 -71282298 + PB1D10 SINE Alu 3 117 0 4 958 262 252 222 17 chr13 49002243 49002360 -71281952 - B1F1 SINE Alu 0 149 9 5 958 704 163 8 0 chr13 49003219 49003342 -71280970 - B1_Mur4 SINE Alu -21 129 6 6 958 345 197 0 0 chr13 49003777 49003848 -71280464 + GA-rich Low_complexity Low_complexity 3 73 0 7 958 277 310 30 10 chr13 49004688 49004789 -71279523 + PB1D7 SINE Alu 1 103 -17 8 958 587 198 18 0 chr13 49009846 49009957 -71274355 - PB1D9 SINE Alu -5 115 3 9 958 29 28 0 0 chr13 49013116 49013152 -71271160 + AT_rich Low_complexity Low_complexity 1 36 0 1 958 764 68 246 0 chr13 49013875 49013993 -71270319 - B1_Mus1 SINE Alu 0 148 2 1 958 606 192 23 39 chr13 49015075 49015205 -71269107 - B1F SINE Alu 0 149 22 1 958 222 254 0 69 chr13 49015260 49015332 -71268980 - FAM SINE Alu -84 227 161 1 958 844 86 0 61 chr13 49018552 49018700 -71265612 - B1_Mur4 SINE Alu -1 149 11 1 958 334 275 0 62 chr13 49018886 49018983 -71265329 - B3A SINE B2 0 198 108 1 958 1332 115 0 54 chr13 49019202 49019405 -71264907 + B2_Mm1a SINE B2 2 193 0 1 958 21 0 0 0 chr13 49020161 49020182 -71264130 + AT_rich Low_complexity Low_complexity 1 21 0 1 958 2826 50 12 3 chr13 49020254 49020597 -71263715 - ORR1A1 LTR MaLR 0 346 1 1 958 291 262 12 12 chr13 49020684 49020765 -71263547 + B4A SINE B4 2 82 -210 1 959 236 276 40 0 chr13 49021541 49021617 -71262695 - L1MC LINE L1 -425 5919 5841 2 959 652 198 144 27 chr13 49021674 49021861 -71262451 - L1MC LINE L1 -585 5748 5540 2 959 3980 142 76 132 chr13 49021861 49022798 -71261514 + RMER19B LTR ERVK 1 886 -16 2 959 1232 41 0 13 chr13 49022798 49022947 -71261365 + B1_Mus2 SINE Alu 1 147 0 2 959 210 273 22 154 chr13 49023049 49023140 -71261172 - RSINE1 SINE B4 0 165 87 2 959 844 214 241 18 chr13 49023299 49023585 -71260727 + ORR1D1 LTR MaLR 25 374 0 2 959 297 354 7 51 chr13 49023783 49023920 -71260392 - RSINE1 SINE B4 -10 155 25 2 959 215 254 31 16 chr13 49024037 49024101 -71260211 + ID4 SINE ID 15 79 -4 2 959 213 161 0 67 chr13 49024103 49024123 -71260189 + A-rich Low_complexity Low_complexity 3 21 0 2 959 1135 55 7 0 chr13 49024123 49024269 -71260043 + B1_Mus2 SINE Alu 1 147 0 2 959 213 161 0 67 chr13 49024269 49024308 -71260004 + A-rich Low_complexity Low_complexity 22 58 0 2 959 333 188 22 66 chr13 49024926 49025017 -71259295 - MER2 DNA MER2_type -166 179 93 3 959 777 236 0 0 chr13 49025455 49025603 -71258709 + B1_Mus1 SINE Alu 1 148 0 3 959 362 289 48 27 chr13 49025642 49025788 -71258524 - RSINE1 SINE B4 -14 151 3 3 959 234 291 115 23 chr13 49026627 49026757 -71257555 - L2 LINE L2 -551 2868 2727 3 959 209 268 0 0 chr13 49027025 49027066 -71257246 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 959 206 298 0 23 chr13 49027217 49027303 -71257009 + GA-rich Low_complexity Low_complexity 2 85 0 3 959 453 240 96 0 chr13 49027471 49027575 -71256737 + PB1D9 SINE Alu 1 114 -6 3 959 1210 61 0 0 chr13 49027881 49028028 -71256284 + B1_Mus2 SINE Alu 1 147 0 3 959 269 26 0 26 chr13 49028095 49028134 -71256178 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 3 959 519 182 202 101 chr13 49028310 49028597 -71255715 + RMER20B LTR ERVK 98 413 -214 3 959 508 217 35 0 chr13 49028990 49029105 -71255207 + PB1D9 SINE Alu 1 119 -1 4 959 820 321 111 15 chr13 49030008 49030406 -71253906 + MLT1D LTR MaLR 1 436 -69 4 959 339 25 0 0 chr13 49030407 49030447 -71253865 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 959 201 74 0 0 chr13 49030502 49030529 -71253783 + (A)n Simple_repeat Simple_repeat 1 27 0 4 959 901 81 52 0 chr13 49031633 49031769 -71252543 + B2_Mm1t SINE B2 37 179 -14 4 959 377 132 0 6 chr13 49031796 49031865 -71252447 + B2_Mm2 SINE B2 47 113 -103 4 959 405 220 184 63 chr13 49031984 49032236 -71252076 + ORR1E LTR MaLR 26 368 -2 4 959 967 291 143 29 chr13 49033164 49033548 -71250764 + L1MB8 LINE L1 5221 5619 -559 4 959 1193 35 21 0 chr13 49033548 49033693 -71250619 + B1_Mus1 SINE Alu 1 148 0 4 959 967 288 159 35 chr13 49033693 49034139 -71250173 + L1MB8 LINE L1 5620 6156 -22 4 959 225 0 0 0 chr13 49034139 49034164 -71250148 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 959 453 145 0 0 chr13 49034164 49034240 -71250072 + (TA)n Simple_repeat Simple_repeat 1 76 0 5 959 491 29 14 0 chr13 49035205 49035274 -71249038 + L1Md_F2 LINE L1 6513 6582 0 5 959 365 262 35 28 chr13 49035388 49035533 -71248779 + B1F1 SINE Alu 2 147 -2 5 959 357 24 0 0 chr13 49036389 49036431 -71247881 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 959 1166 62 14 0 chr13 49036499 49036644 -71247668 + B1_Mus2 SINE Alu 1 147 0 5 959 299 116 0 42 chr13 49036644 49036716 -71247596 + A-rich Low_complexity Low_complexity 1 69 0 5 959 1112 165 2 93 chr13 49036917 49037256 -71247056 + RMER10B LTR ERVL 1 398 0 5 959 443 211 36 9 chr13 49037915 49038025 -71246287 + B1_Mur1 SINE Alu 31 143 -6 5 959 422 325 25 19 chr13 49039084 49039241 -71245071 + RSINE1 SINE B4 8 165 0 5 959 1217 54 0 0 chr13 49039868 49040016 -71244296 + B1_Mus1 SINE Alu 1 148 0 5 959 270 0 0 0 chr13 49040020 49040050 -71244262 + (A)n Simple_repeat Simple_repeat 1 30 0 6 959 217 134 33 67 chr13 49042373 49042493 -71241819 + (TATG)n Simple_repeat Simple_repeat 1 116 0 6 959 429 20 0 0 chr13 49042748 49042798 -71241514 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 959 310 218 10 103 chr13 49042804 49042901 -71241411 + B4 SINE B4 131 218 -74 6 959 207 0 0 0 chr13 49043024 49043047 -71241265 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 959 218 307 39 29 chr13 49043466 49043488 -71240824 + B1F SINE Alu 45 147 0 6 959 316 262 12 0 chr13 49043488 49043568 -71240744 + ID_B1 SINE B4 144 224 0 6 959 1084 51 29 7 chr13 49043678 49043816 -71240496 + B1_Mus2 SINE Alu 2 142 -5 6 959 961 131 0 7 chr13 49043856 49043994 -71240318 - B1_Mus1 SINE Alu -10 138 2 6 959 453 234 43 79 chr13 49044025 49044164 -71240148 - B3 SINE B2 -5 211 78 6 959 1135 51 0 0 chr13 49045277 49045414 -71238898 + B1_Mus1 SINE Alu 1 137 -11 7 959 225 65 0 0 chr13 49047478 49047509 -71236803 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 7 959 378 136 0 0 chr13 49047646 49047727 -71236585 + (GA)n Simple_repeat Simple_repeat 1 81 0 7 959 277 291 55 0 chr13 49047773 49047883 -71236429 + PB1D10 SINE Alu 1 116 -1 7 959 588 302 139 23 chr13 49047903 49047991 -71236321 + B4A SINE B4 1 104 -188 7 959 1392 86 16 0 chr13 49047991 49048178 -71236134 + B2_Mm2 SINE B2 2 191 -4 7 959 588 302 139 23 chr13 49048178 49048347 -71235965 + B4A SINE B4 105 287 -5 7 959 225 261 0 30 chr13 49048351 49048418 -71235894 + (CATATA)n Simple_repeat Simple_repeat 1 65 0 7 959 313 318 59 96 chr13 49048625 49048928 -71235384 + B4A SINE B4 1 292 0 7 959 2639 182 103 19 chr13 49049056 49049648 -71234664 + RLTR26 LTR ERVK 1 642 0 7 959 696 130 17 0 chr13 49049648 49049763 -71234549 - URR1B DNA MER1_type -60 165 49 7 959 424 252 60 10 chr13 49049823 49049923 -71234389 + PB1D10 SINE Alu 10 114 -3 8 959 234 0 0 0 chr13 49049975 49050001 -71234311 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 8 959 1198 49 0 0 chr13 49050001 49050144 -71234168 - B1_Mm SINE Alu -2 145 3 8 959 948 106 28 7 chr13 49050651 49050793 -71233519 - B1_Mur4 SINE Alu -1 149 5 8 959 274 225 29 128 chr13 49050838 49050878 -71233434 + B3 SINE B2 1 40 -176 8 959 1158 68 0 0 chr13 49050878 49051025 -71233287 + B1_Mm SINE Alu 1 147 0 8 959 377 200 53 37 chr13 49051025 49051136 -71233176 + B3 SINE B2 41 215 -1 8 959 189 107 0 0 chr13 49051201 49051229 -71233083 + (TC)n Simple_repeat Simple_repeat 2 29 0 8 959 429 114 299 26 chr13 49051241 49051358 -71232954 - B2_Mm2 SINE B2 0 195 47 8 959 1235 87 17 11 chr13 49051389 49051564 -71232748 - B2_Mm1t SINE B2 -14 179 4 8 959 596 137 17 8 chr13 49051567 49051685 -71232627 + RMER10B LTR ERVL 227 345 -53 8 959 360 294 66 46 chr13 49052800 49052996 -71231316 + B4A SINE B4 93 292 0 9 959 279 0 0 0 chr13 49053055 49053086 -71231226 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 959 22 35 0 0 chr13 49053580 49053609 -71230703 + AT_rich Low_complexity Low_complexity 1 29 0 9 959 1050 110 14 0 chr13 49054433 49054578 -71229734 - B1_Mur4 SINE Alu -1 149 3 9 959 617 265 36 6 chr13 49054619 49054786 -71229526 - B3A SINE B2 -26 172 1 9 959 361 292 47 0 chr13 49055166 49055272 -71229040 - MER20 DNA MER1_type 0 219 109 9 959 1426 56 0 30 chr13 49055393 49055595 -71228717 + L1Md_F2 LINE L1 6375 6570 -12 9 959 591 253 60 24 chr13 49055629 49055795 -71228517 + B3 SINE B2 38 209 -7 9 959 21 0 0 0 chr13 49055932 49055953 -71228359 + AT_rich Low_complexity Low_complexity 1 21 0 9 959 333 216 243 0 chr13 49055968 49056079 -71228233 + B1_Mur1 SINE Alu 12 149 0 9 959 490 233 0 37 chr13 49056083 49056190 -71228122 + PB1D9 SINE Alu 1 103 -17 1 959 543 183 38 9 chr13 49057012 49057117 -71227195 - B1_Mur2 SINE Alu 0 149 42 1 959 209 231 0 0 chr13 49057117 49057156 -71227156 + (TCTCTG)n Simple_repeat Simple_repeat 6 44 0 1 959 322 318 29 50 chr13 49057314 49057453 -71226859 + L1M3 LINE L1 5625 5760 -423 1 959 240 59 0 0 chr13 49057692 49057726 -71226586 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 959 641 12 0 12 chr13 49059134 49059218 -71225094 + L1Md_T LINE L1 6498 6580 -2 1 959 408 340 63 13 chr13 49059436 49059594 -71224718 - B4A SINE B4 -123 169 4 1 959 860 275 10 0 chr13 49059625 49059818 -71224494 - ID_B1 SINE B4 -3 221 27 1 959 943 182 22 11 chr13 49059880 49060063 -71224249 + B3 SINE B2 27 211 -5 1 959 451 303 202 73 chr13 49060193 49060279 -71224033 - Tigger15a DNA TcMar -158 557 472 1 959 770 221 48 14 chr13 49060279 49060486 -71223826 - B3 SINE B2 -2 214 1 1 959 451 303 202 73 chr13 49060486 49060741 -71223571 - Tigger15a DNA TcMar -244 471 172 1 959 216 77 19 37 chr13 49063197 49063251 -71221061 + (CGG)n Simple_repeat Simple_repeat 2 54 0 1 959 25 51 0 0 chr13 49063255 49063294 -71221018 + GC_rich Low_complexity Low_complexity 1 39 0 1 959 223 250 36 0 chr13 49063435 49063547 -71220765 + (CGG)n Simple_repeat Simple_repeat 2 117 0 1 959 621 177 167 27 chr13 49064023 49064209 -71220103 + ID_B1 SINE B4 1 212 -12 1 959 317 185 15 0 chr13 49064466 49064531 -71219781 - Lx8 LINE L1 0 7473 7408 1 959 22 0 0 0 chr13 49064981 49065003 -71219309 + AT_rich Low_complexity Low_complexity 1 22 0 1 959 540 210 8 63 chr13 49065578 49065705 -71218607 + B1_Mur4 SINE Alu 19 138 -12 1 959 369 210 13 184 chr13 49065705 49065730 -71218582 + ID_B1 SINE B4 99 224 0 1 959 188 35 35 0 chr13 49065792 49065821 -71218491 + (CGGGGG)n Simple_repeat Simple_repeat 5 34 0 1 959 388 285 59 37 chr13 49065923 49066058 -71218254 - B1F SINE Alu -8 141 4 1 959 1890 188 68 12 chr13 49066387 49066786 -71217526 - MTC LTR MaLR 0 421 1 1 959 470 176 236 32 chr13 49066809 49066932 -71217380 + B1_Mus1 SINE Alu 1 148 0 1 959 782 174 174 0 chr13 49067811 49067983 -71216329 + B3 SINE B2 1 202 -14 1 959 1853 190 69 23 chr13 49068216 49068609 -71215703 + RMER4A LTR ERVK 56 466 0 1 959 499 327 43 39 chr13 49069040 49069272 -71215040 - B4 SINE B4 -59 233 1 1 959 232 184 0 0 chr13 49069529 49069567 -71214745 - 4.5SRNA scRNA scRNA -16 78 41 1 959 1183 121 50 0 chr13 49069925 49070107 -71214205 + B2_Mm2 SINE B2 3 193 -2 1 959 229 240 20 0 chr13 49070327 49070348 -71213964 + MT2B2 LTR ERVL 237 258 -326 1 959 723 176 0 25 chr13 49070348 49070470 -71213842 + PB1D9 SINE Alu 2 120 0 1 959 315 263 107 113 chr13 49070671 49070821 -71213491 - ORR1E LTR MaLR -192 167 19 1 959 1227 68 0 0 chr13 49071069 49071217 -71213095 + B1_Mus1 SINE Alu 1 148 0 1 959 206 32 32 0 chr13 49071238 49071269 -71213043 + (TAA)n Simple_repeat Simple_repeat 2 33 0 1 959 667 180 46 23 chr13 49071387 49071518 -71212794 + B1_Mur3 SINE Alu 1 134 -15 1 959 341 203 0 0 chr13 49071580 49071639 -71212673 + B2_Mm2 SINE B2 1 59 -136 1 959 433 207 172 0 chr13 49071907 49072023 -71212289 + ID_B1 SINE B4 81 216 -8 1 959 1074 150 28 6 chr13 49072197 49072378 -71211934 + URR1B DNA MER1_type 37 221 -4 1 959 907 233 9 19 chr13 49072476 49072690 -71211622 + B3 SINE B2 1 212 -4 1 959 22 0 0 0 chr13 49072746 49072768 -71211544 + AT_rich Low_complexity Low_complexity 1 22 0 1 959 680 173 5 0 chr13 49072948 49073174 -71211138 + (TG)n Simple_repeat Simple_repeat 1 227 0 1 959 189 0 0 0 chr13 49073377 49073398 -71210914 + (A)n Simple_repeat Simple_repeat 1 21 0 1 959 857 181 7 0 chr13 49073766 49073915 -71210397 - B1_Mur4 SINE Alu 0 150 1 1 959 944 140 0 13 chr13 49074779 49074931 -71209381 - B1_Mur4 SINE Alu 0 150 1 1 959 273 238 154 30 chr13 49075513 49075593 -71208719 + RMER17A LTR ERVK 328 407 -344 1 959 204 40 0 0 chr13 49075593 49075618 -71208694 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 959 273 238 154 30 chr13 49075618 49075706 -71208606 + RMER17A LTR ERVK 408 517 -234 1 959 994 110 20 20 chr13 49075820 49075968 -71208344 + B1_Mur4 SINE Alu 1 148 -2 1 959 1394 65 5 37 chr13 49076128 49076319 -71207993 + B2_Mm1a SINE B2 2 186 -7 1 959 1406 212 151 37 chr13 49076633 49077010 -71207302 - MTC LTR MaLR -1 420 1 1 959 636 226 23 0 chr13 49077143 49077276 -71207036 + B1_Mur1 SINE Alu 1 136 -13 1 959 483 18 0 0 chr13 49077408 49077464 -71206848 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 1 959 309 217 33 0 chr13 49077621 49077681 -71206631 - MLT1D LTR MaLR -5 500 439 1 959 361 360 82 34 chr13 49077703 49077936 -71206376 + B4A SINE B4 34 277 -15 1 959 824 302 68 58 chr13 49078042 49078336 -71205976 + RMER15 LTR ERVL 207 505 -70 1 959 2734 145 70 20 chr13 49078336 49078837 -71205475 + RLTR11A2 LTR ERVK 2 527 0 1 959 824 302 68 58 chr13 49078837 49078907 -71205405 + RMER15 LTR ERVL 506 575 0 1 959 383 294 0 0 chr13 49078984 49079076 -71205236 - ID_B1 SINE B4 -9 215 124 1 959 789 247 133 31 chr13 49079074 49079253 -71205059 - B3 SINE B2 0 216 17 1 959 1850 161 103 3 chr13 49079253 49079602 -71204710 + ORR1C2 LTR MaLR 1 384 0 1 959 789 247 133 31 chr13 49079602 49079618 -71204694 - B3 SINE B2 -200 16 1 1 959 541 264 43 7 chr13 49079618 49079749 -71204563 - ID_B1 SINE B4 -88 136 1 1 959 268 180 98 0 chr13 49079784 49079845 -71204467 - ORR1C2 LTR MaLR 0 384 318 1 959 544 269 19 37 chr13 49080334 49080496 -71203816 + RSINE1 SINE B4 3 161 -4 1 959 283 189 19 0 chr13 49080598 49080651 -71203661 + PB1D7 SINE Alu 1 54 -66 1 959 282 248 48 32 chr13 49080836 49080942 -71203370 - B1F SINE Alu -6 143 7 1 959 3036 36 88 0 chr13 49080943 49081307 -71203005 - MTA_Mm LTR MaLR 0 396 1 1 959 9178 42 3 0 chr13 49081307 49082402 -71201910 - MTA_Mm-int LTR MaLR 0 1098 1 1 959 3433 38 2 0 chr13 49082402 49082797 -71201515 - MTA_Mm LTR MaLR 0 396 1 1 959 22 0 0 0 chr13 49082803 49082825 -71201487 + AT_rich Low_complexity Low_complexity 1 22 0 1 959 1132 77 0 0 chr13 49082825 49082968 -71201344 - B1_Mus2 SINE Alu 0 147 5 1 959 477 304 0 0 chr13 49082998 49083110 -71201202 + PB1D10 SINE Alu 1 112 -5 1 959 889 45 0 0 chr13 49083202 49083312 -71201000 + B1_Mus1 SINE Alu 39 148 0 1 959 461 338 70 56 chr13 49083311 49083589 -71200723 - MLT1A LTR MaLR -25 349 54 1 959 234 277 42 11 chr13 49084259 49084354 -71199958 + L1MDa LINE L1 318 415 -6218 1 959 222 100 50 0 chr13 49084426 49084466 -71199846 - B2_Mm2 SINE B2 -153 42 1 1 959 232 221 265 0 chr13 49084551 49084619 -71199693 + L1MDa LINE L1 688 773 -5860 1 959 709 236 38 61 chr13 49084861 49085073 -71199239 + B3 SINE B2 9 215 -1 1 959 2016 118 31 16 chr13 49085919 49086237 -71198075 + ORR1B2 LTR MaLR 5 327 -40 1 959 1109 73 0 0 chr13 49086237 49086374 -71197938 + B1_Mm SINE Alu 2 138 -9 1 959 968 199 45 35 chr13 49086448 49086646 -71197666 - B3 SINE B2 -8 208 9 1 959 213 108 0 0 chr13 49086697 49086734 -71197578 + (GAAA)n Simple_repeat Simple_repeat 2 38 0 1 959 1129 76 7 0 chr13 49086736 49086880 -71197432 + B1_Mus2 SINE Alu 1 145 -2 1 959 735 12 0 0 chr13 49086891 49086975 -71197337 + (GA)n Simple_repeat Simple_repeat 2 85 0 1 959 1573 62 0 0 chr13 49087247 49087440 -71196872 + B2_Mm1t SINE B2 1 193 0 1 959 34 42 0 0 chr13 49087485 49087533 -71196779 + AT_rich Low_complexity Low_complexity 1 48 0 1 959 44 20 0 0 chr13 49087582 49087633 -71196679 + AT_rich Low_complexity Low_complexity 1 51 0 1 959 651 283 76 30 chr13 49087638 49087835 -71196477 - B3A SINE B2 -4 212 7 1 959 609 256 113 4 chr13 49087856 49088103 -71196209 + L1MDa LINE L1 4133 4406 -2131 1 959 567 0 0 0 chr13 49088332 49088395 -71195917 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 959 2703 131 75 7 chr13 49088410 49088865 -71195447 - RMER6A LTR ERVK -270 486 1 1 959 259 355 52 31 chr13 49088882 49088900 -71195412 - RSINE1 SINE B4 -67 98 3 1 959 522 158 0 0 chr13 49088900 49088976 -71195336 - B3A SINE B2 -121 77 2 1 959 437 221 56 56 chr13 49088987 49089131 -71195181 + L1MB5 LINE L1 6031 6174 0 1 959 1304 93 16 27 chr13 49089142 49089330 -71194982 + B2_Mm2 SINE B2 1 186 -9 1 959 465 285 23 0 chr13 49089342 49089472 -71194840 + RSINE1 SINE B4 2 134 -31 1 959 746 109 0 8 chr13 49089507 49089636 -71194676 + (CA)n Simple_repeat Simple_repeat 1 128 0 1 959 399 229 12 24 chr13 49089716 49089801 -71194511 - B3 SINE B2 -1 215 132 1 959 189 0 0 0 chr13 49089832 49089853 -71194459 + (A)n Simple_repeat Simple_repeat 1 21 0 1 959 307 276 98 6 chr13 49090008 49090116 -71194196 + B3 SINE B2 55 168 -48 1 959 351 65 0 0 chr13 49090116 49090162 -71194150 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 959 307 300 35 43 chr13 49090162 49090203 -71194109 + B3 SINE B2 169 210 -6 1 959 530 211 172 39 chr13 49090745 49090873 -71193439 + RSINE1 SINE B4 17 161 -4 1 959 279 212 0 0 chr13 49090907 49090987 -71193325 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 959 1402 67 17 0 chr13 49091118 49091298 -71193014 - B2_Mm2 SINE B2 -8 187 5 1 959 675 256 101 29 chr13 49091460 49091596 -71192716 - B4A SINE B4 -68 224 86 1 959 477 50 0 0 chr13 49091596 49091656 -71192656 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 959 675 256 101 29 chr13 49091656 49091728 -71192584 - B4A SINE B4 -207 85 2 1 959 1021 263 28 81 chr13 49091886 49092283 -71192029 - MTE2a LTR MaLR 0 379 4 1 959 586 290 26 43 chr13 49092285 49092519 -71191793 + L1MB3 LINE L1 5557 5786 -394 1 959 281 227 78 49 chr13 49092897 49092999 -71191313 + L1MB3 LINE L1 5868 5972 -211 1 959 272 226 79 43 chr13 49093041 49093180 -71191132 + L1MB3 LINE L1 6037 6180 0 1 959 918 262 19 0 chr13 49093196 49093402 -71190910 + B3 SINE B2 4 213 -3 1 959 285 170 75 0 chr13 49093441 49093494 -71190818 + ID SINE ID 29 85 -139 2 959 748 280 53 77 chr13 49093702 49094039 -71190273 + LTR55 LTR ERV 2 330 -218 2 959 245 324 104 25 chr13 49094260 49094449 -71189863 + MIR SINE MIR 42 244 -18 2 959 262 217 0 0 chr13 49094664 49094710 -71189602 + Lx8 LINE L1 6315 6360 -1113 2 959 711 241 14 81 chr13 49094769 49094990 -71189322 + RLTR23 LTR ERV1 225 430 0 2 959 3263 260 20 46 chr13 49094991 49095583 -71188729 + Lx8 LINE L1 6422 7017 -456 2 959 895 148 0 0 chr13 49095583 49095718 -71188594 + B1_Mur4 SINE Alu 1 135 -15 2 959 3263 260 20 46 chr13 49095718 49096019 -71188293 + Lx8 LINE L1 7018 7292 -181 2 959 230 327 0 0 chr13 49096070 49096125 -71188187 + B4 SINE B4 16 70 -222 2 959 1814 228 63 47 chr13 49096150 49096639 -71187673 - RMER5 LTR ERV1 -1 533 37 2 959 485 289 0 0 chr13 49096821 49096925 -71187387 - PB1D10 SINE Alu 0 117 14 2 959 2420 64 38 3 chr13 49097724 49098038 -71186274 - ORR1A2 LTR MaLR -2 325 1 2 959 407 268 0 0 chr13 49098053 49098135 -71186177 - B1_Mur3 SINE Alu -8 141 60 2 959 635 179 19 9 chr13 49098137 49098244 -71186068 - B1_Mm SINE Alu -37 110 3 2 959 398 94 16 0 chr13 49098252 49098316 -71185996 + (TG)n Simple_repeat Simple_repeat 2 66 0 2 959 408 130 0 0 chr13 49098406 49098475 -71185837 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 959 253 218 18 35 chr13 49098492 49098549 -71185763 - B4 SINE B4 0 292 237 2 959 868 145 20 20 chr13 49098699 49098847 -71185465 - B1_Mur3 SINE Alu 0 149 2 2 959 392 212 224 68 chr13 49098921 49099113 -71185199 - B4 SINE B4 -67 225 4 2 959 634 199 47 47 chr13 49099158 49099306 -71185006 - B1_Mur4 SINE Alu 0 150 3 2 959 284 331 7 50 chr13 49099186 49099326 -71184986 - ID_B1 SINE B4 -27 197 64 2 959 3242 31 3 0 chr13 49099540 49099921 -71184391 + L1Md_F2 LINE L1 6201 6582 0 2 959 1145 69 7 0 chr13 49099959 49100103 -71184209 + B1_Mus2 SINE Alu 2 146 -1 2 959 267 326 0 0 chr13 49100283 49100369 -71183943 + (TG)n Simple_repeat Simple_repeat 1 86 0 2 959 479 304 18 36 chr13 49100369 49100536 -71183776 - RSINE1 SINE B4 0 165 2 2 959 261 0 0 0 chr13 49100587 49100616 -71183696 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2 959 1632 26 21 0 chr13 49100674 49100863 -71183449 + B2_Mm1a SINE B2 1 193 0 2 959 445 289 178 15 chr13 49100884 49101081 -71183231 + B4A SINE B4 2 230 -62 2 959 384 22 0 0 chr13 49101151 49101196 -71183116 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 959 252 0 0 0 chr13 49101416 49101444 -71182868 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 959 1173 62 8 28 chr13 49101459 49101826 -71182486 + (TCTA)n Simple_repeat Simple_repeat 1 359 0 2 959 1351 135 87 0 chr13 49102188 49102396 -71181916 + URR1A DNA MER1_type 1 226 0 2 959 329 232 44 18 chr13 49102469 49102583 -71181729 + L1MEc LINE L1 684 800 -5602 2 959 855 69 8 25 chr13 49102644 49102763 -71181549 + B1_Mur4 SINE Alu 33 149 -1 2 959 1540 48 0 5 chr13 49102769 49102956 -71181356 + B2_Mm2 SINE B2 2 187 -8 2 959 579 240 231 7 chr13 49103035 49103182 -71181130 + B3 SINE B2 31 210 -6 2 959 1448 80 11 0 chr13 49103288 49103475 -71180837 - B2_Mm2 SINE B2 -6 189 1 2 959 726 282 130 32 chr13 49103488 49104280 -71180032 + L1MEc LINE L1 994 1948 -4454 2 959 310 298 146 54 chr13 49104330 49104625 -71179687 + L1MEc LINE L1 1986 2307 -4201 2 959 438 318 53 0 chr13 49104723 49104855 -71179457 + B4A SINE B4 1 139 -153 2 959 4724 129 50 87 chr13 49104855 49105513 -71178799 - RMER17B LTR ERVK 0 958 288 2 959 1188 75 0 0 chr13 49105513 49105660 -71178652 - B1_Mm SINE Alu 0 147 1 2 959 4724 129 50 87 chr13 49105660 49105995 -71178317 - RMER17B LTR ERVK -671 287 1 2 959 515 156 31 10 chr13 49105995 49106074 -71178238 + B4A SINE B4 139 217 -75 2 959 423 0 0 0 chr13 49106074 49106121 -71178191 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 2 959 515 156 31 10 chr13 49106121 49106135 -71178177 + B4A SINE B4 218 232 -60 2 959 1068 257 121 71 chr13 49106176 49106557 -71177755 + RMER19C LTR ERVK 1 400 -211 2 959 1372 325 88 2 chr13 49106557 49107103 -71177209 - Lx8 LINE L1 -354 7119 6527 2 959 874 57 17 17 chr13 49107129 49107261 -71177051 - B1_Mus1 SINE Alu 0 150 2 2 959 654 290 80 30 chr13 49107274 49107639 -71176673 - L1MA9 LINE L1 -85 6206 5817 2 959 362 162 92 26 chr13 49107666 49107742 -71176570 - B1_Mur2 SINE Alu -10 139 59 2 959 241 182 92 0 chr13 49107760 49107817 -71176495 - B1_Mm SINE Alu -1 148 82 2 959 23 33 0 0 chr13 49108038 49108068 -71176244 + AT_rich Low_complexity Low_complexity 1 30 0 2 959 324 246 24 88 chr13 49109130 49109255 -71175057 - B1F1 SINE Alu -32 117 1 2 959 273 248 85 31 chr13 49109440 49109569 -71174743 - L1MEc LINE L1 -4939 1461 1326 2 959 247 247 82 47 chr13 49109626 49109711 -71174601 - MTEb LTR MaLR -14 365 278 2 959 1859 92 11 266 chr13 49110205 49110755 -71173557 - RMER17C LTR ERVK 0 410 1 2 959 281 278 54 22 chr13 49111146 49111238 -71173074 - B3A SINE B2 -102 96 2 2 959 216 0 0 0 chr13 49111248 49111272 -71173040 + (T)n Simple_repeat Simple_repeat 1 24 0 2 959 529 135 154 0 chr13 49112287 49112391 -71171921 - PB1D9 SINE Alu 0 120 1 2 959 1371 87 0 5 chr13 49112405 49112601 -71171711 - B2_Mm2 SINE B2 0 195 1 2 959 1960 174 3 3 chr13 49112723 49113068 -71171244 - ORR1A1 LTR MaLR -1 345 1 2 959 1751 178 6 49 chr13 49113108 49113474 -71170838 + ORR1D1 LTR MaLR 1 350 -24 2 959 333 0 0 0 chr13 49113501 49113538 -71170774 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 959 1136 197 14 0 chr13 49113584 49113792 -71170520 + B3 SINE B2 6 216 0 2 959 246 212 14 43 chr13 49113941 49114010 -71170302 + GA-rich Low_complexity Low_complexity 3 69 0 2 959 346 294 82 72 chr13 49114420 49114614 -71169698 + ORR1E LTR MaLR 154 349 -10 2 959 833 118 0 46 chr13 49114790 49114941 -71169371 - B2_Mm2 SINE B2 -9 186 43 2 959 252 0 0 0 chr13 49114955 49114983 -71169329 + (TGG)n Simple_repeat Simple_repeat 1 28 0 2 959 1166 61 0 0 chr13 49115009 49115156 -71169156 - B1_Mm SINE Alu 0 147 1 2 959 750 184 61 12 chr13 49115211 49115376 -71168936 - B2_Mm2 SINE B2 -22 173 1 2 959 276 290 87 46 chr13 49115398 49115593 -71168719 - L1MC4 LINE L1 -145 7897 7695 2 959 666 225 112 32 chr13 49116110 49116298 -71168014 - B3 SINE B2 0 216 14 2 959 599 284 33 38 chr13 49116306 49116489 -71167823 + B4A SINE B4 50 231 -61 2 959 395 159 58 0 chr13 49116490 49116559 -71167753 + Lx8 LINE L1 7166 7238 -235 2 959 223 316 57 32 chr13 49116585 49116628 -71167684 - B4A SINE B4 -46 246 86 2 959 520 195 26 9 chr13 49116628 49116742 -71167570 - B1_Mur4 SINE Alu -34 116 1 2 959 258 297 0 113 chr13 49116742 49116773 -71167539 - MT2B LTR ERVL -447 154 139 2 959 311 197 132 0 chr13 49116773 49116849 -71167463 + Lx8 LINE L1 7254 7339 -134 2 959 850 166 0 20 chr13 49116879 49117027 -71167285 + B1_Mus1 SINE Alu 3 147 -1 2 959 619 201 166 43 chr13 49117156 49117343 -71166969 + B3 SINE B2 1 210 -6 2 959 294 0 0 0 chr13 49117798 49117835 -71166477 - B1_Mus1 SINE Alu -109 39 3 2 959 1550 43 0 0 chr13 49117870 49118058 -71166254 - B2_Mm1a SINE B2 -4 189 2 2 959 422 241 55 18 chr13 49118489 49118599 -71165713 + Tigger7 DNA MER2_type 2 115 -2376 2 959 425 106 290 89 chr13 49118600 49118724 -71165588 - B2_Mm2 SINE B2 0 195 47 2 959 1268 80 23 0 chr13 49118737 49118912 -71165400 - B2_Mm2 SINE B2 -14 181 3 2 959 248 0 31 0 chr13 49118923 49118955 -71165357 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2 959 1154 35 0 14 chr13 49118955 49119093 -71165219 - B1_Mm SINE Alu -9 138 1 2 959 669 287 80 19 chr13 49119096 49119309 -71165003 + Tigger7 DNA MER2_type 108 333 -2158 2 959 433 182 0 54 chr13 49119327 49119420 -71164892 - ID_B1 SINE B4 0 224 137 2 959 288 265 9 81 chr13 49119541 49119652 -71164660 - PB1D10 SINE Alu -8 109 7 2 959 614 265 27 0 chr13 49119586 49119733 -71164579 - ID_B1 SINE B4 -70 154 4 2 959 465 221 138 0 chr13 49119738 49119883 -71164429 + Tigger7 DNA MER2_type 2297 2461 -30 2 959 295 149 40 118 chr13 49120009 49120085 -71164227 - ID2 SINE ID -11 72 3 2 959 245 102 0 39 chr13 49120222 49120273 -71164039 + (CGGGG)n Simple_repeat Simple_repeat 3 51 0 2 959 594 0 0 0 chr13 49121350 49121416 -71162896 + (TTTTC)n Simple_repeat Simple_repeat 3 68 0 2 959 384 22 0 0 chr13 49121416 49121461 -71162851 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 2 959 441 54 0 0 chr13 49121463 49121519 -71162793 + (TTTC)n Simple_repeat Simple_repeat 3 58 0 2 959 1064 70 0 0 chr13 49121519 49121661 -71162651 - B1_Mus1 SINE Alu 0 148 7 2 959 478 253 63 76 chr13 49121521 49121679 -71162633 - B4 SINE B4 -68 224 69 2 959 1930 138 23 111 chr13 49121840 49122273 -71162039 - RMER10B LTR ERVL 0 398 4 2 959 318 352 30 12 chr13 49122300 49122460 -71161852 + MLT1A1 LTR MaLR 24 186 -222 2 959 341 310 103 102 chr13 49122460 49122795 -71161517 + MTEb LTR MaLR 1 375 -4 2 959 756 269 37 9 chr13 49122841 49123059 -71161253 - ID_B1 SINE B4 0 224 1 2 959 490 269 47 82 chr13 49123224 49123394 -71160918 + B4A SINE B4 9 172 -120 2 959 186 155 33 33 chr13 49123519 49123579 -71160733 + (CATA)n Simple_repeat Simple_repeat 2 61 0 2 959 262 176 20 0 chr13 49123582 49123633 -71160679 + MLT1A1 LTR MaLR 357 408 0 2 959 289 282 94 114 chr13 49125018 49125285 -71159027 + ORR1E LTR MaLR 1 263 -111 2 959 1440 50 0 0 chr13 49125420 49125681 -71158631 + (TG)n Simple_repeat Simple_repeat 1 261 0 2 959 943 267 35 35 chr13 49125682 49125942 -71158370 - B4A SINE B4 -23 269 10 2 959 4056 159 21 8 chr13 49126219 49126930 -71157382 - RMER19B LTR ERVK -182 720 1 2 959 228 303 0 0 chr13 49127040 49127106 -71157206 + T-rich Low_complexity Low_complexity 3 68 0 2 959 855 152 21 0 chr13 49127107 49127252 -71157060 - B1_Mur3 SINE Alu -1 148 1 3 959 252 0 0 0 chr13 49127286 49127314 -71156998 + (T)n Simple_repeat Simple_repeat 1 28 0 3 959 297 0 0 0 chr13 49127329 49127362 -71156950 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 959 234 235 20 0 chr13 49127524 49127575 -71156737 - Lx8 LINE L1 -565 6908 6857 3 959 1481 144 64 4 chr13 49127768 49128033 -71156279 - RMER4B LTR ERVK -9 576 296 3 959 408 322 76 28 chr13 49128037 49128248 -71156064 - LTR52 LTR ERVL -196 225 5 3 959 284 307 83 51 chr13 49128292 49128457 -71155855 - L1MEc LINE L1 -3613 2706 2523 3 959 1449 58 10 16 chr13 49128457 49128651 -71155661 + B2_Mm1a SINE B2 1 193 0 3 959 284 307 83 51 chr13 49128651 49128739 -71155573 - L1MEc LINE L1 -3797 2522 2445 3 959 321 251 130 52 chr13 49128782 49129013 -71155299 - L1MEc LINE L1 -3915 2485 2237 3 959 230 219 200 45 chr13 49129205 49129315 -71154997 + MLT1A0 LTR MaLR 239 365 0 3 959 2080 100 16 0 chr13 49129373 49129682 -71154630 + ORR1A2 LTR MaLR 6 319 -8 3 959 2742 162 17 58 chr13 49130145 49130415 -71153897 + RMER20A LTR ERVK 1 259 -257 3 959 1174 48 0 0 chr13 49130415 49130562 -71153750 - B1_Mus2 SINE Alu 0 147 1 3 959 2742 162 17 58 chr13 49130562 49130829 -71153483 + RMER20A LTR ERVK 260 516 0 3 959 450 259 390 55 chr13 49130876 49131094 -71153218 - B4A SINE B4 0 292 2 3 959 624 232 137 33 chr13 49131101 49131284 -71153028 - B4 SINE B4 -88 204 3 3 959 253 254 15 0 chr13 49135088 49135155 -71149157 + ID2 SINE ID 12 79 -4 3 959 295 345 109 15 chr13 49135352 49135617 -71148695 + L1M5 LINE L1 4181 4470 -1676 3 959 694 241 12 24 chr13 49136043 49136213 -71148099 + B4A SINE B4 123 290 -2 3 959 605 259 0 57 chr13 49136581 49136757 -71147555 - B3A SINE B2 -3 195 30 3 959 430 360 33 90 chr13 49136842 49137263 -71147049 + L1M5 LINE L1 3121 3517 -2629 3 959 327 206 8 130 chr13 49137388 49137511 -71146801 + L1M5 LINE L1 3503 3610 -2536 3 959 246 81 0 0 chr13 49139292 49139329 -71144983 + (A)n Simple_repeat Simple_repeat 1 37 0 3 959 328 236 117 9 chr13 49140046 49140157 -71144155 + L1MEe LINE L1 682 804 -4050 3 959 938 142 13 0 chr13 49142585 49142740 -71141572 + ORR1C1 LTR MaLR 1 157 -221 3 959 368 153 20 0 chr13 49142740 49142838 -71141474 + (TAGA)n Simple_repeat Simple_repeat 4 103 0 3 959 883 161 37 6 chr13 49142847 49143009 -71141303 + B2_Mm2 SINE B2 2 168 -27 3 959 932 156 75 38 chr13 49142990 49143176 -71141136 + ORR1C1 LTR MaLR 186 378 0 3 959 321 169 0 0 chr13 49144049 49144108 -71140204 + (TA)n Simple_repeat Simple_repeat 2 60 0 3 959 286 195 0 94 chr13 49145149 49145234 -71139078 - ID4 SINE ID 0 83 7 3 959 448 279 101 0 chr13 49148431 49148560 -71135752 - ID_B1 SINE B4 -1 223 82 3 959 601 240 24 0 chr13 49149015 49149140 -71135172 - B1F1 SINE Alu 0 149 22 3 959 332 263 29 69 chr13 49149222 49149324 -71134988 + B4A SINE B4 25 122 -170 3 959 633 288 33 22 chr13 49151017 49151198 -71133114 + B4A SINE B4 102 284 -8 3 960 950 123 0 7 chr13 49153667 49153814 -71130498 + B1_Mus2 SINE Alu 2 147 0 3 960 314 227 101 11 chr13 49154299 49154388 -71129924 + PB1D7 SINE Alu 24 120 0 3 960 555 305 0 0 chr13 49154388 49154516 -71129796 + RSINE1 SINE B4 3 130 -35 3 960 3645 175 90 30 chr13 49154523 49155334 -71128978 + RMER13A LTR ERVK 1 860 0 3 960 785 277 66 0 chr13 49157565 49157681 -71126631 + B4A SINE B4 3 122 -170 3 960 243 0 0 0 chr13 49157681 49157708 -71126604 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 960 785 277 66 0 chr13 49157708 49157804 -71126508 + B4A SINE B4 123 228 -64 3 960 234 0 0 0 chr13 49157811 49157837 -71126475 + (A)n Simple_repeat Simple_repeat 1 26 0 3 960 1124 290 48 12 chr13 49158502 49158914 -71125398 - L1MB1 LINE L1 -287 5902 5476 3 960 534 311 13 0 chr13 49158929 49159080 -71125232 - RSINE1 SINE B4 -2 163 11 3 960 275 219 78 0 chr13 49159079 49159143 -71125169 - B3A SINE B2 -101 97 29 3 960 723 120 94 36 chr13 49159168 49159306 -71125006 - B1_Mur3 SINE Alu -1 148 3 3 960 462 298 140 65 chr13 49159416 49159832 -71124480 - L1MD2 LINE L1 -4118 2522 2078 3 960 360 0 0 0 chr13 49159832 49159872 -71124440 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 960 462 304 172 60 chr13 49159872 49160374 -71123938 - L1MD2 LINE L1 -4555 2085 1486 3 960 579 331 104 36 chr13 49160406 49160933 -71123379 - L1MD2 LINE L1 -5284 1356 782 3 960 273 57 0 0 chr13 49160933 49160968 -71123344 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 960 579 326 136 39 chr13 49160968 49161093 -71123219 - L1MD2 LINE L1 -5766 781 651 3 960 701 218 7 7 chr13 49164009 49164157 -71120155 - B1_Mur2 SINE Alu -1 148 1 3 960 1086 248 187 0 chr13 49165337 49165647 -71118665 + MTE2b LTR MaLR 1 368 -11 3 960 21 0 0 0 chr13 49168927 49168948 -71115364 + AT_rich Low_complexity Low_complexity 1 21 0 3 960 1858 168 82 37 chr13 49168959 49169361 -71114951 + MTC LTR MaLR 2 421 0 3 960 809 176 8 0 chr13 49169361 49169492 -71114820 + RSINE1 SINE B4 5 136 -29 3 960 192 77 0 0 chr13 49169516 49169542 -71114770 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 960 682 223 68 37 chr13 49169567 49169758 -71114554 + B3A SINE B2 2 198 0 3 960 576 0 0 0 chr13 49170385 49170449 -71113863 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 960 725 236 82 5 chr13 49171114 49171310 -71113002 + B3 SINE B2 1 211 -5 3 960 498 17 0 0 chr13 49172483 49172542 -71111770 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 3 960 1308 80 17 0 chr13 49172542 49172718 -71111594 - B2_Mm2 SINE B2 -14 181 3 3 960 237 213 0 0 chr13 49173735 49173782 -71110530 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 960 507 170 196 47 chr13 49174786 49174934 -71109378 - B3 SINE B2 0 216 47 3 960 431 231 370 16 chr13 49176236 49176425 -71107887 + B4A SINE B4 29 284 -8 3 960 660 150 165 0 chr13 49176697 49176824 -71107488 + B1_Mur4 SINE Alu 3 150 0 3 960 216 0 0 0 chr13 49176828 49176852 -71107460 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 3 960 23 0 0 0 chr13 49176862 49176885 -71107427 + AT_rich Low_complexity Low_complexity 1 23 0 3 960 200 264 19 0 chr13 49178107 49178160 -71106152 + GA-rich Low_complexity Low_complexity 4 57 0 3 960 284 150 33 0 chr13 49178660 49178720 -71105592 + (CATA)n Simple_repeat Simple_repeat 2 63 0 3 960 924 138 0 0 chr13 49178723 49178868 -71105444 - B1_Mus1 SINE Alu -1 147 3 3 960 207 114 0 0 chr13 49179046 49179081 -71105231 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 960 312 163 191 0 chr13 49181404 49181511 -71102801 + B3A SINE B2 4 157 -41 3 960 422 177 0 25 chr13 49181629 49181710 -71102602 - B1_Mur1 SINE Alu 0 149 71 3 960 258 105 0 0 chr13 49184009 49184047 -71100265 + (TTA)n Simple_repeat Simple_repeat 2 39 0 3 960 708 190 28 42 chr13 49184051 49184194 -71100118 - B1_Mur4 SINE Alu -7 143 3 3 960 272 323 49 125 chr13 49184194 49184235 -71100077 - B4 SINE B4 -73 219 50 3 960 2663 99 5 5 chr13 49184869 49185255 -71099057 + ORR1B1 LTR MaLR 1 386 -8 3 960 687 303 30 70 chr13 49188485 49188783 -71095529 + B4A SINE B4 1 286 -6 3 960 204 289 0 0 chr13 49189453 49189498 -71094814 + polypurine Low_complexity Low_complexity 4 48 0 3 960 417 271 32 108 chr13 49191475 49191632 -71092680 - B4 SINE B4 -4 288 144 3 960 268 191 26 115 chr13 49191739 49191844 -71092468 - B3A SINE B2 -99 96 2 3 960 1556 26 10 5 chr13 49193404 49193596 -71090716 + B2_Mm1a SINE B2 1 193 0 3 960 528 301 95 132 chr13 49194701 49194904 -71089408 - B4A SINE B4 0 292 94 3 960 457 283 56 51 chr13 49194904 49195101 -71089211 - B3A SINE B2 0 198 1 3 960 528 301 95 132 chr13 49195101 49195192 -71089120 - B4A SINE B4 -199 93 9 3 960 2187 167 76 107 chr13 49197571 49198121 -71086191 + RMER16 LTR ERVK 1 533 0 3 960 932 209 57 5 chr13 49198952 49199164 -71085148 + ID_B1 SINE B4 2 224 0 3 960 266 273 40 67 chr13 49200088 49200322 -71083990 + L1MC LINE L1 5107 5331 -815 3 960 1209 47 0 0 chr13 49200619 49200767 -71083545 + B1_Mus1 SINE Alu 1 148 0 3 960 215 93 0 23 chr13 49200769 49200789 -71083523 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 3 960 210 37 0 0 chr13 49200789 49200816 -71083496 + (CAA)n Simple_repeat Simple_repeat 1 27 0 3 960 215 93 0 23 chr13 49200816 49200839 -71083473 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 960 296 261 0 0 chr13 49200974 49201043 -71083269 - ID2 SINE ID -13 70 2 3 960 366 200 48 36 chr13 49201165 49201248 -71083064 - PB1D9 SINE Alu -11 109 26 3 960 431 310 115 18 chr13 49201243 49201460 -71082852 - B4A SINE B4 -54 238 1 3 960 26 82 0 0 chr13 49201492 49201553 -71082759 + AT_rich Low_complexity Low_complexity 1 61 0 3 960 447 19 0 0 chr13 49201586 49201638 -71082674 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 960 458 251 167 64 chr13 49202176 49202440 -71081872 + B4A SINE B4 2 292 0 3 960 321 140 0 0 chr13 49202787 49202844 -71081468 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 960 733 94 0 0 chr13 49203348 49203454 -71080858 + B1_Mur3 SINE Alu 44 149 0 3 960 604 241 133 5 chr13 49204107 49204295 -71080017 - B3 SINE B2 -4 212 1 3 960 1109 82 0 0 chr13 49204353 49204499 -71079813 - B1_Mus1 SINE Alu 0 148 3 3 960 668 120 0 8 chr13 49204505 49204623 -71079689 - Lx LINE L1 -1 6653 6537 3 960 878 97 13 71 chr13 49209189 49209344 -71074968 - B1_Mur4 SINE Alu 0 150 5 3 960 629 260 7 7 chr13 49210122 49210269 -71074043 + RSINE1 SINE B4 3 149 -16 3 960 225 94 0 0 chr13 49210289 49210321 -71073991 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 960 1505 264 75 21 chr13 49210335 49210761 -71073551 + RCHARR1 DNA MER1_type 67 515 -459 3 960 1519 171 168 16 chr13 49210784 49211170 -71073142 + Lx9 LINE L1 7135 7579 -65 3 960 1581 289 41 37 chr13 49211172 49211682 -71072630 + RLTR20B3 LTR ERVK 1 512 -65 4 960 1348 66 39 0 chr13 49211683 49211864 -71072448 + B2_Mm2 SINE B2 2 189 -6 4 960 311 164 0 0 chr13 49211943 49212010 -71072302 + Lx9 LINE L1 7577 7643 -1 3 960 1536 199 74 0 chr13 49212029 49212380 -71071932 + RCHARR1 DNA MER1_type 523 899 -75 3 960 482 264 8 0 chr13 49212715 49212836 -71071476 + ID_B1 SINE B4 82 203 -21 4 960 719 277 6 6 chr13 49213001 49213179 -71071133 + B3 SINE B2 5 182 -34 4 960 378 107 0 0 chr13 49213179 49213235 -71071077 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 960 306 0 0 0 chr13 49213242 49213276 -71071036 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 4 960 366 236 172 11 chr13 49213295 49213475 -71070837 + L1MEg LINE L1 717 925 -5159 4 960 728 312 13 66 chr13 49213477 49213651 -71070661 + B4A SINE B4 2 164 -128 4 960 2270 106 73 6 chr13 49213651 49213992 -71070320 + ORR1B2 LTR MaLR 1 364 -3 4 960 728 312 13 66 chr13 49213992 49214122 -71070190 + B4A SINE B4 165 290 -2 4 960 604 350 56 36 chr13 49214164 49214469 -71069843 + L1MEg LINE L1 916 1226 -4858 4 960 1128 120 23 0 chr13 49214482 49214657 -71069655 + B2_Mm1t SINE B2 1 179 -14 4 960 255 155 85 17 chr13 49214716 49214775 -71069537 + B2_Mm2 SINE B2 47 109 -86 4 960 343 286 170 15 chr13 49214821 49214956 -71069356 + B3A SINE B2 27 182 -16 4 960 274 319 137 23 chr13 49215020 49215370 -71068942 + L1MEg LINE L1 1251 1640 -4444 4 960 287 254 0 0 chr13 49215406 49215465 -71068847 + B4 SINE B4 43 101 -191 4 960 292 272 46 46 chr13 49215617 49215748 -71068564 + B4A SINE B4 83 213 -79 4 960 387 0 0 0 chr13 49215752 49215795 -71068517 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 960 723 282 61 21 chr13 49215796 49216075 -71068237 + B4A SINE B4 1 290 -2 4 960 253 237 0 119 chr13 49216117 49216184 -71068128 + B4 SINE B4 228 286 -6 4 960 992 109 0 0 chr13 49216358 49216495 -71067817 + B1_Mus1 SINE Alu 1 137 -11 4 960 860 85 0 15 chr13 49216495 49216627 -71067685 + (GAAAA)n Simple_repeat Simple_repeat 1 130 0 4 960 1201 94 21 32 chr13 49216636 49216823 -71067489 + B2_Mm1t SINE B2 2 186 -7 4 960 287 233 139 0 chr13 49218019 49218105 -71066207 + RCHARR1 DNA MER1_type 273 370 -604 4 960 593 245 27 27 chr13 49218164 49218311 -71066001 + RCHARR1 DNA MER1_type 482 628 -346 4 960 489 184 25 12 chr13 49218555 49218715 -71065597 + (TGAA)n Simple_repeat Simple_repeat 1 162 0 4 960 278 289 20 10 chr13 49218722 49218820 -71065492 + (TGAG)n Simple_repeat Simple_repeat 2 100 0 4 960 426 205 49 49 chr13 49219083 49219206 -71065106 - RCHARR1 DNA MER1_type -26 948 826 4 960 294 0 0 0 chr13 49219206 49219241 -71065071 + U2 snRNA snRNA 1 35 -153 4 960 492 211 53 0 chr13 49219296 49219410 -71064902 + B4A SINE B4 131 250 -42 4 960 1015 209 40 27 chr13 49219420 49219682 -71064630 + Lx4B LINE L1 6720 7058 0 4 960 878 267 213 9 chr13 49219682 49220220 -71064092 - RCHARR1 DNA MER1_type -322 652 4 4 960 2929 39 0 0 chr13 49220227 49220588 -71063724 + L1Md_F2 LINE L1 5226 5586 -297 4 960 7998 44 0 0 chr13 49220588 49221584 -71062728 + L1Md_F2 LINE L1 5587 6582 0 4 960 365 333 101 13 chr13 49221788 49221937 -71062375 + RSINE1 SINE B4 2 163 -2 4 960 180 0 0 0 chr13 49223955 49223975 -71060337 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 4 960 2993 62 0 0 chr13 49224073 49224463 -71059849 - MTB LTR MaLR -2 398 9 4 960 922 256 10 10 chr13 49228044 49228253 -71056059 - ID_B1 SINE B4 -15 209 1 4 960 1026 158 121 10 chr13 49230273 49230471 -71053841 - URR1B DNA MER1_type -3 222 3 4 960 419 288 17 86 chr13 49231163 49231338 -71052974 + MT2B LTR ERVL 94 256 -345 4 960 796 175 0 21 chr13 49231247 49231373 -71052939 + B1_Mus1 SINE Alu 12 137 -11 4 960 203 0 0 36 chr13 49231373 49231401 -71052911 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 960 796 175 0 21 chr13 49231401 49231414 -71052898 + B1_Mus1 SINE Alu 138 148 0 4 960 319 336 7 41 chr13 49231498 49231644 -71052668 + MLT1L LTR MaLR 338 478 -132 4 960 278 229 143 12 chr13 49232084 49232168 -71052144 - MER103 DNA DNA -59 107 13 4 960 29 0 0 0 chr13 49232802 49232831 -71051481 + AT_rich Low_complexity Low_complexity 1 29 0 4 960 677 290 36 40 chr13 49233018 49233266 -71051046 - L1MC1 LINE L1 -466 5867 5621 4 960 524 288 65 46 chr13 49233283 49233437 -71050875 - L1MC1 LINE L1 -804 5529 5376 4 960 3367 43 5 2 chr13 49233437 49233832 -71050480 + MTA_Mm LTR MaLR 1 396 0 4 960 524 288 65 46 chr13 49233832 49233939 -71050373 - L1MC1 LINE L1 -958 5375 5263 4 960 236 115 38 25 chr13 49233939 49233966 -71050346 + T-rich Low_complexity Low_complexity 56 82 0 4 960 994 54 131 0 chr13 49233966 49234096 -71050216 - B1_Mm SINE Alu 0 147 1 4 960 236 115 38 25 chr13 49234096 49234148 -71050164 + T-rich Low_complexity Low_complexity 3 55 0 4 960 836 275 55 110 chr13 49234150 49234730 -71049582 - L1MC1 LINE L1 -836 5310 4763 4 960 333 0 0 0 chr13 49235252 49235289 -71049023 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 960 333 0 0 0 chr13 49235875 49235912 -71048400 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 960 1227 73 85 0 chr13 49237002 49237166 -71047146 + B2_Mm2 SINE B2 2 179 -16 4 960 501 32 0 0 chr13 49237168 49237231 -71047081 + (GAGAA)n Simple_repeat Simple_repeat 3 65 0 4 960 189 0 0 0 chr13 49238095 49238116 -71046196 + (CAG)n Simple_repeat Simple_repeat 1 21 0 4 960 1464 89 5 5 chr13 49238441 49238634 -71045678 + B2_Mm2 SINE B2 1 193 -2 4 960 724 160 174 0 chr13 49240272 49240416 -71043896 + URR1B DNA MER1_type 1 169 -56 4 960 935 139 11 52 chr13 49240407 49240581 -71043731 + URR1B DNA MER1_type 58 224 -1 4 960 294 298 21 11 chr13 49241198 49241293 -71043019 + GA-rich Low_complexity Low_complexity 2 97 0 4 960 45 0 0 0 chr13 49242296 49242341 -71041971 + GC_rich Low_complexity Low_complexity 1 45 0 4 960 33 43 0 0 chr13 49243047 49243094 -71041218 + GC_rich Low_complexity Low_complexity 1 47 0 4 960 252 173 73 106 chr13 49243868 49243991 -71040321 + PB1 SINE Alu 7 125 -2 4 960 263 390 44 6 chr13 49244556 49244739 -71039573 + MER63A DNA AcHobo 1 190 -20 4 960 279 234 47 47 chr13 49245237 49245322 -71038990 + PB1D9 SINE Alu 7 91 -29 4 960 888 197 34 193 chr13 49246833 49247042 -71037270 + MTD LTR MaLR 148 333 -86 4 960 844 176 7 14 chr13 49247042 49247186 -71037126 - B1_Mus1 SINE Alu -1 147 5 4 960 888 197 34 193 chr13 49247186 49247230 -71037082 + MTD LTR MaLR 334 357 -62 4 960 1137 69 14 0 chr13 49247230 49247375 -71036937 - B1_Mus2 SINE Alu 0 147 1 4 960 888 197 34 193 chr13 49247375 49247441 -71036871 + MTD LTR MaLR 358 417 -2 4 960 564 257 7 7 chr13 49247448 49247585 -71036727 + ID_B1 SINE B4 82 218 -6 4 960 274 344 20 0 chr13 49247746 49247872 -71036440 + ID2 SINE ID 3 134 -18 4 960 755 273 100 42 chr13 49247874 49248233 -71036079 + L1M2 LINE L1 4374 4753 -1390 4 960 255 276 0 0 chr13 49248368 49248426 -71035886 - B3A SINE B2 -26 172 115 4 960 1050 96 0 0 chr13 49248638 49248804 -71035508 + (CA)n Simple_repeat Simple_repeat 2 167 0 4 960 225 196 0 0 chr13 49249274 49249330 -71034982 + T-rich Low_complexity Low_complexity 1 56 0 4 960 240 317 129 28 chr13 49249706 49249938 -71034374 + L1M5 LINE L1 5548 5805 -319 4 960 320 352 30 36 chr13 49250145 49250310 -71034002 + MIRb SINE MIR 8 175 -93 4 960 478 269 132 42 chr13 49250380 49250644 -71033668 + B4 SINE B4 1 288 -4 4 960 21 0 0 0 chr13 49251532 49251553 -71032759 + AT_rich Low_complexity Low_complexity 1 21 0 4 960 787 175 97 62 chr13 49252118 49252313 -71031999 + B3 SINE B2 13 214 -2 4 960 421 264 0 0 chr13 49252314 49252401 -71031911 + ID_B1 SINE B4 131 217 -7 4 960 297 207 59 35 chr13 49252762 49252847 -71031465 - MLT1A1 LTR MaLR -3 405 319 4 960 308 259 49 12 chr13 49252954 49253036 -71031276 - MLT1A1 LTR MaLR -294 114 30 4 960 423 0 0 0 chr13 49253422 49253469 -71030843 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 960 713 259 38 5 chr13 49253833 49254019 -71030293 + B3A SINE B2 7 198 0 4 960 1317 20 0 0 chr13 49254042 49254189 -71030123 - B1_Mus1 SINE Alu 0 148 2 4 960 433 295 71 24 chr13 49254870 49255040 -71029272 - MLT1K LTR MaLR -19 576 399 4 960 292 305 83 21 chr13 49255104 49255248 -71029064 - MLT1K LTR MaLR -322 273 121 4 960 657 247 14 7 chr13 49255266 49255413 -71028899 + B3A SINE B2 3 150 -48 4 960 255 61 0 0 chr13 49255967 49256000 -71028312 + (GTGTG)n Simple_repeat Simple_repeat 4 36 0 4 960 741 153 22 11 chr13 49256010 49256188 -71028124 + (GGGTG)n Simple_repeat Simple_repeat 1 180 0 4 960 948 151 20 7 chr13 49256533 49256680 -71027632 + B1_Mur2 SINE Alu 1 149 0 4 960 687 269 19 0 chr13 49256693 49256849 -71027463 + B3A SINE B2 2 160 -38 4 960 396 0 0 0 chr13 49256849 49256893 -71027419 + (TC)n Simple_repeat Simple_repeat 1 44 0 4 960 396 0 0 0 chr13 49256893 49256936 -71027376 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 960 338 292 91 81 chr13 49256936 49256964 -71027348 + B2_Mm2 SINE B2 161 187 -8 4 960 545 156 10 10 chr13 49257375 49257472 -71026840 - B1_Mur2 SINE Alu -18 131 35 4 960 456 295 0 0 chr13 49257516 49257628 -71026684 - B3A SINE B2 -60 138 27 4 960 480 333 37 12 chr13 49257830 49257994 -71026318 - L1MC LINE L1 -2228 5654 5487 4 960 523 181 17 0 chr13 49258416 49258532 -71025780 + CT-rich Low_complexity Low_complexity 1 118 0 4 960 844 282 90 19 chr13 49260148 49260382 -71023930 + B4 SINE B4 7 263 -29 4 960 243 88 0 0 chr13 49260382 49260416 -71023896 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 960 844 282 90 19 chr13 49260416 49260448 -71023864 + B4 SINE B4 264 291 -1 4 960 492 99 0 0 chr13 49260502 49260573 -71023739 + (TA)n Simple_repeat Simple_repeat 2 72 0 4 960 1045 93 36 0 chr13 49260573 49260712 -71023600 - B1_Mus2 SINE Alu -3 144 1 4 960 368 338 51 130 chr13 49261614 49261650 -71022662 + B4 SINE B4 2 35 -257 4 960 3346 48 5 10 chr13 49261650 49262051 -71022261 + MTB LTR MaLR 2 400 0 4 960 368 338 51 130 chr13 49262051 49262330 -71021982 + B4 SINE B4 36 292 0 4 960 469 230 10 0 chr13 49262707 49262807 -71021505 - PB1D10 SINE Alu -15 102 2 4 960 327 313 140 100 chr13 49262840 49263049 -71021263 - L1MB7 LINE L1 -67 6117 5882 4 960 1750 167 93 45 chr13 49263049 49263469 -71020843 + RMER10A LTR ERVL 1 440 -2 4 960 327 313 140 100 chr13 49263469 49263660 -71020652 - L1MB7 LINE L1 -303 5881 5701 4 960 191 36 0 35 chr13 49263666 49263695 -71020617 + (GGGTG)n Simple_repeat Simple_repeat 4 31 0 4 960 731 118 113 40 chr13 49263699 49263823 -71020489 - B1_Mus1 SINE Alu -14 134 2 4 960 697 218 21 0 chr13 49263885 49264027 -71020285 - B1_Mur4 SINE Alu 0 150 6 4 960 540 288 52 48 chr13 49264055 49264365 -71019947 - L1M4 LINE L1 -579 5610 5300 4 960 360 0 0 0 chr13 49264373 49264413 -71019899 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 960 546 319 0 14 chr13 49264607 49264753 -71019559 + RSINE1 SINE B4 3 146 -19 5 960 334 240 190 25 chr13 49265066 49265224 -71019088 - L1M4 LINE L1 -853 5293 5110 4 960 339 307 87 9 chr13 49265561 49265676 -71018636 - MIRc SINE MIR -76 192 69 5 960 397 218 25 91 chr13 49266320 49266441 -71017871 + ZP3AR Satellite Satellite 41 153 -59 5 960 304 260 78 0 chr13 49266464 49266541 -71017771 + ID4_ SINE ID 1 83 0 5 960 249 304 14 0 chr13 49266543 49266612 -71017700 + GA-rich Low_complexity Low_complexity 3 72 0 5 960 641 322 97 54 chr13 49267040 49267503 -71016809 + MLT1J LTR MaLR 25 507 -5 5 960 426 328 79 39 chr13 49268389 49268643 -71015669 + L1MB3 LINE L1 5719 5982 -201 5 960 1525 73 5 5 chr13 49268933 49269127 -71015185 + B2_Mm2 SINE B2 2 195 0 5 960 285 280 46 9 chr13 49269337 49269445 -71014867 + PB1D10 SINE Alu 1 112 -5 5 960 320 209 15 15 chr13 49269502 49269570 -71014742 + GA-rich Low_complexity Low_complexity 3 70 0 5 960 919 210 31 5 chr13 49269597 49269793 -71014519 + B3 SINE B2 1 201 -15 5 960 1508 55 0 27 chr13 49270331 49270517 -71013795 + B2_Mm2 SINE B2 1 181 -14 5 960 337 238 80 45 chr13 49270730 49270818 -71013494 + PB1D10 SINE Alu 21 111 -6 5 960 395 301 22 89 chr13 49271488 49271667 -71012645 + B4 SINE B4 7 173 -119 5 960 405 324 27 0 chr13 49271667 49271815 -71012497 + (CATG)n Simple_repeat Simple_repeat 4 155 0 5 960 265 324 0 0 chr13 49271988 49272059 -71012253 + PB1D10 SINE Alu 39 109 -8 5 960 568 195 24 6 chr13 49272059 49272229 -71012083 + (TAGA)n Simple_repeat Simple_repeat 1 173 0 5 960 1186 51 6 0 chr13 49272810 49272966 -71011346 + B2_Mm2 SINE B2 2 158 -37 5 960 249 33 0 0 chr13 49272967 49272997 -71011315 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 5 960 572 268 140 0 chr13 49273041 49273162 -71011150 + B4 SINE B4 87 219 -73 5 960 215 29 88 0 chr13 49273162 49273196 -71011116 + (ATGGTG)n Simple_repeat Simple_repeat 2 38 0 5 960 572 268 140 0 chr13 49273196 49273253 -71011059 + B4 SINE B4 220 289 -3 5 960 234 128 0 0 chr13 49273258 49273297 -71011015 + (CATA)n Simple_repeat Simple_repeat 4 42 0 5 960 681 24 0 0 chr13 49273448 49273531 -71010781 + (CA)n Simple_repeat Simple_repeat 2 84 0 5 960 895 136 29 0 chr13 49273662 49273802 -71010510 - B1_Mus1 SINE Alu 0 148 5 5 960 224 310 14 0 chr13 49274042 49274113 -71010199 + CT-rich Low_complexity Low_complexity 1 72 0 5 960 343 281 29 178 chr13 49275588 49275796 -71008516 - B4 SINE B4 -22 270 94 5 960 787 121 0 77 chr13 49275654 49275797 -71008515 - B1_Mur4 SINE Alu -10 140 9 5 960 2088 123 135 3 chr13 49276023 49276407 -71007905 - BGLII_B LTR ERVK 0 441 7 5 960 255 61 0 0 chr13 49277390 49277423 -71006889 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 5 960 469 272 44 0 chr13 49277441 49277555 -71006757 - ID_B1 SINE B4 -83 141 23 5 960 279 182 212 0 chr13 49277498 49277564 -71006748 - ID4 SINE ID -1 82 3 5 960 410 294 73 88 chr13 49277590 49277851 -71006461 - MLT1J LTR MaLR -16 496 240 5 960 297 0 0 0 chr13 49277979 49278012 -71006300 + (TC)n Simple_repeat Simple_repeat 2 34 0 5 960 960 262 4 25 chr13 49278356 49278591 -71005721 - B4 SINE B4 -51 241 12 5 960 214 171 24 0 chr13 49279514 49279555 -71004757 + (CACG)n Simple_repeat Simple_repeat 2 43 0 5 960 445 290 18 83 chr13 49280448 49280617 -71003695 - B4 SINE B4 -132 160 3 5 960 368 171 233 13 chr13 49280625 49280744 -71003568 - B1_Mus1 SINE Alu -1 148 23 5 960 387 0 0 0 chr13 49280745 49280788 -71003524 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 960 780 193 7 7 chr13 49280803 49280949 -71003363 + B1_Mur1 SINE Alu 1 146 -3 5 960 588 240 66 19 chr13 49280983 49281167 -71003145 - B3A SINE B2 -9 184 2 5 960 628 203 372 0 chr13 49281371 49281524 -71002788 - B3 SINE B2 -5 211 2 5 960 890 96 22 0 chr13 49281533 49281669 -71002643 - B1_Mus1 SINE Alu 0 148 10 5 960 273 254 27 0 chr13 49282782 49282892 -71001420 + G-rich Low_complexity Low_complexity 4 116 0 5 961 342 0 0 0 chr13 49284437 49284475 -70999837 + (CCTG)n Simple_repeat Simple_repeat 3 40 0 5 961 209 330 117 18 chr13 49284797 49284908 -70999404 + MIR SINE MIR 112 233 -29 5 961 235 282 26 0 chr13 49287406 49287484 -70996828 + (TG)n Simple_repeat Simple_repeat 1 80 0 5 961 312 27 0 0 chr13 49287595 49287632 -70996680 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 961 181 115 0 0 chr13 49288489 49288515 -70995797 - L2b LINE L2 -17 3358 3333 5 961 580 276 21 7 chr13 49291915 49292057 -70992255 + ID_B1 SINE B4 80 223 -1 5 961 255 343 45 7 chr13 49292070 49292160 -70992152 + PB1 SINE Alu 1 76 -51 5 961 246 32 0 0 chr13 49292794 49292825 -70991487 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 961 297 0 0 0 chr13 49292825 49292857 -70991455 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 961 868 212 198 0 chr13 49292858 49293075 -70991237 - B4A SINE B4 -32 260 1 5 961 704 145 0 79 chr13 49293736 49293863 -70990449 + PB1D9 SINE Alu 3 119 -1 5 961 717 83 149 0 chr13 49295668 49295789 -70988523 + B1_Mus2 SINE Alu 9 147 0 5 961 516 72 0 0 chr13 49295795 49295864 -70988448 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 5 961 25 31 0 0 chr13 49296833 49296865 -70987447 + AT_rich Low_complexity Low_complexity 1 32 0 5 961 2156 208 46 16 chr13 49296865 49297304 -70987008 - Lx5 LINE L1 -4 7046 6595 5 961 194 333 13 13 chr13 49297599 49297675 -70986637 + MIR SINE MIR 113 188 -74 5 961 186 256 134 0 chr13 49300974 49301056 -70983256 + MIRb SINE MIR 88 180 -88 5 961 194 261 14 55 chr13 49301749 49301822 -70982490 + MIRb SINE MIR 120 189 -79 5 961 733 244 46 11 chr13 49302078 49302252 -70982060 - B4A SINE B4 -6 286 107 5 961 2561 127 66 39 chr13 49302391 49302586 -70981726 + MTC LTR MaLR 2 213 -208 5 961 1269 116 21 5 chr13 49302586 49302776 -70981536 + B2_Mm2 SINE B2 3 195 0 5 961 1163 82 7 0 chr13 49302776 49302922 -70981390 + B1_Mus1 SINE Alu 1 148 0 5 961 525 32 0 0 chr13 49302924 49302987 -70981325 + (GGAA)n Simple_repeat Simple_repeat 3 65 0 5 961 2561 127 66 39 chr13 49302987 49303196 -70981116 + MTC LTR MaLR 214 420 -1 5 961 702 238 140 15 chr13 49303645 49303965 -70980347 + L1M4c LINE L1 2174 2530 -3852 5 961 391 220 190 112 chr13 49303978 49304157 -70980155 + RMER30 DNA MER1_type 9 201 -1 5 961 1227 274 108 32 chr13 49304159 49304588 -70979724 + L1M4c LINE L1 2537 2985 -3397 5 961 5091 85 3 7 chr13 49304588 49305276 -70979036 + Lx2A1 LINE L1 6324 7008 0 5 961 1227 274 108 32 chr13 49305276 49305529 -70978783 + L1M4c LINE L1 2986 3271 -3111 5 961 444 291 28 69 chr13 49305546 49305690 -70978622 + B1F2 SINE Alu 12 149 0 5 961 328 184 214 0 chr13 49305816 49305919 -70978393 + L1M4c LINE L1 3415 3539 -2843 5 961 441 247 0 30 chr13 49305921 49306021 -70978291 + PB1D10 SINE Alu 2 98 -19 5 961 369 0 0 0 chr13 49306023 49306064 -70978248 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 961 586 287 98 53 chr13 49306096 49306444 -70977868 + B4A SINE B4 9 290 -2 5 961 420 191 0 0 chr13 49306446 49306530 -70977782 + (CA)n Simple_repeat Simple_repeat 1 84 0 5 961 486 0 0 0 chr13 49306531 49306585 -70977727 + (CACAT)n Simple_repeat Simple_repeat 1 54 0 5 961 275 267 0 39 chr13 49306608 49306686 -70977626 + PB1D10 SINE Alu 43 117 0 5 961 402 247 0 0 chr13 49306690 49306775 -70977537 + BC1_Mm scRNA scRNA 6 90 -62 5 961 872 262 131 0 chr13 49306804 49307109 -70977203 + L1MC2 LINE L1 5820 6164 -180 5 961 541 192 11 11 chr13 49307464 49307643 -70976669 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 5 961 234 0 0 0 chr13 49307664 49307690 -70976622 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 961 686 202 212 6 chr13 49307722 49307901 -70976411 + B3 SINE B2 1 216 0 5 961 953 62 0 0 chr13 49307974 49308103 -70976209 - B1_Mm SINE Alu 0 147 19 5 961 294 29 0 0 chr13 49309806 49309841 -70974471 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 961 267 54 0 0 chr13 49309841 49309877 -70974435 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 961 195 390 79 30 chr13 49310288 49310452 -70973860 + MIRb SINE MIR 51 222 -46 5 961 239 261 47 39 chr13 49311852 49311945 -70972367 - MIRm SINE MIR -49 159 75 5 961 218 289 0 0 chr13 49312108 49312160 -70972152 + MIRc SINE MIR 95 146 -122 5 961 225 308 62 76 chr13 49313545 49313689 -70970623 - MER31B LTR ERV1 -50 416 275 5 961 725 265 28 57 chr13 49313690 49313902 -70970410 + ID_B1 SINE B4 17 222 -2 5 961 283 218 139 13 chr13 49313924 49314003 -70970309 + B4A SINE B4 1 89 -203 5 961 294 286 156 0 chr13 49314476 49314661 -70969651 - MER31B LTR ERV1 -239 227 1 5 961 228 256 70 32 chr13 49314717 49314820 -70969492 + PB1D10 SINE Alu 26 137 -12 5 961 212 260 226 0 chr13 49314910 49315056 -70969256 + L2 LINE L2 2618 2796 -623 5 961 369 0 0 0 chr13 49315711 49315752 -70968560 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 961 495 226 82 15 chr13 49316053 49316188 -70968124 + MLT1F LTR MaLR 280 423 -125 5 961 675 87 0 96 chr13 49316209 49316387 -70967925 + CT-rich Low_complexity Low_complexity 1 161 0 5 961 723 145 78 9 chr13 49316387 49316547 -70967765 - B2_Mm2 SINE B2 -7 191 1 5 961 1405 83 15 15 chr13 49316858 49317053 -70967259 - B2_Mm2 SINE B2 0 195 1 5 961 240 170 0 0 chr13 49317087 49317140 -70967172 + CT-rich Low_complexity Low_complexity 2 54 0 5 961 1071 94 0 0 chr13 49317141 49317321 -70966991 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 961 418 178 87 22 chr13 49317406 49317498 -70966814 + RMER10A LTR ERVL 318 415 -27 6 961 524 15 15 0 chr13 49318031 49318096 -70966216 + (TC)n Simple_repeat Simple_repeat 2 67 0 6 961 861 41 8 47 chr13 49318141 49318269 -70966043 - B1_Mus1 SINE Alu -1 147 25 6 961 362 254 38 132 chr13 49318142 49318301 -70966011 - B4A SINE B4 -68 224 81 6 961 345 198 0 47 chr13 49318361 49318446 -70965866 + RLTR42-int LTR ERVK 1527 1607 -3915 6 961 1185 243 105 55 chr13 49318750 49319508 -70964804 + RLTR42-int LTR ERVK 1870 2876 -3261 6 961 454 215 49 103 chr13 49319560 49319783 -70964529 + RLTR42-int LTR ERVK 2870 3080 -3057 6 961 3360 150 33 13 chr13 49319788 49320417 -70963895 - RLTR26 LTR ERVK 0 642 1 6 961 281 239 82 52 chr13 49321431 49321528 -70962784 + RMER10A LTR ERVL 318 417 -25 6 961 199 316 92 0 chr13 49321742 49321840 -70962472 - L2 LINE L2 -418 3001 2895 6 961 330 339 31 21 chr13 49321915 49322108 -70962204 + L1M3 LINE L1 5627 5822 -349 6 961 479 309 123 5 chr13 49322113 49322308 -70962004 + ID_B1 SINE B4 2 219 -5 6 961 3168 73 5 12 chr13 49322319 49322722 -70961590 + MTB LTR MaLR 1 400 0 6 961 384 281 0 58 chr13 49322753 49322874 -70961438 + PB1 SINE Alu 12 125 -2 6 961 273 326 30 10 chr13 49322894 49322993 -70961319 + PB1D10 SINE Alu 8 108 -9 6 961 636 258 124 21 chr13 49323012 49323206 -70961106 + B3 SINE B2 1 214 -2 6 961 248 140 0 39 chr13 49323615 49323667 -70960645 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 6 961 486 315 112 0 chr13 49323898 49324076 -70960236 - B3 SINE B2 -17 199 2 6 961 280 237 19 97 chr13 49324468 49324571 -70959741 - PB1D10 SINE Alu 0 117 23 6 961 1402 103 11 0 chr13 49324634 49324818 -70959494 + B2_Mm2 SINE B2 2 187 -8 6 961 1371 67 39 0 chr13 49324828 49325006 -70959306 + B2_Mm2 SINE B2 2 186 -9 6 961 405 191 274 26 chr13 49325089 49325202 -70959110 - B1_Mur2 SINE Alu -7 142 2 6 961 257 250 18 0 chr13 49325269 49325325 -70958987 - ID4 SINE ID -14 69 13 6 961 329 178 117 94 chr13 49325351 49325460 -70958852 - PB1 SINE Alu -3 124 14 6 961 298 354 68 24 chr13 49325520 49325769 -70958543 + MLT1G3 LTR MaLR 138 397 -198 6 961 282 287 39 29 chr13 49325896 49326000 -70958312 - PB1D7 SINE Alu -1 119 15 6 961 479 217 160 47 chr13 49325922 49326072 -70958240 - ID_B1 SINE B4 -57 167 1 6 961 473 233 29 0 chr13 49327390 49327493 -70956819 - ID_B1 SINE B4 -105 119 14 6 961 655 201 49 21 chr13 49327523 49327665 -70956647 - B1F2 SINE Alu -3 146 1 6 961 2119 125 280 13 chr13 49328089 49328543 -70955769 + RMER15 LTR ERVL 1 575 0 6 961 477 237 0 34 chr13 49328718 49328836 -70955476 + PB1 SINE Alu 14 127 0 6 961 589 274 0 7 chr13 49329433 49329569 -70954743 + ID_B1 SINE B4 84 218 -6 6 961 223 378 68 31 chr13 49329569 49329593 -70954719 + FAM SINE Alu 138 303 -8 6 961 1186 50 0 0 chr13 49329885 49330024 -70954288 - B1_Mus1 SINE Alu -6 142 4 6 961 1017 148 78 11 chr13 49330027 49330218 -70954094 - URR1B DNA MER1_type -21 204 1 6 961 786 282 55 0 chr13 49330216 49330436 -70953876 + ORR1E LTR MaLR 1 232 -127 6 961 1357 82 5 37 chr13 49330481 49330671 -70953641 - B2_Mm2 SINE B2 -10 185 2 6 961 607 124 0 0 chr13 49330671 49330760 -70953552 - 4.5SRNA scRNA scRNA -5 89 1 6 961 225 225 13 78 chr13 49330752 49330784 -70953528 + ORR1E LTR MaLR 297 328 -42 6 961 1025 156 37 11 chr13 49330784 49330972 -70953340 - B2_Mm2 SINE B2 -1 194 2 6 961 225 225 13 78 chr13 49330972 49331016 -70953296 + ORR1E LTR MaLR 329 368 -2 6 961 784 152 13 82 chr13 49331117 49331275 -70953037 - B1_Mm SINE Alu 0 147 1 6 961 2338 155 99 3 chr13 49331277 49331659 -70952653 + MTC LTR MaLR 3 421 0 6 961 849 278 55 20 chr13 49331858 49332060 -70952252 + ID_B1 SINE B4 1 209 -15 6 961 201 129 0 0 chr13 49332063 49332094 -70952218 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 6 961 895 204 7 3 chr13 49332205 49332504 -70951808 + GA-rich Low_complexity Low_complexity 1 300 0 6 961 24 32 0 0 chr13 49333336 49333367 -70950945 + AT_rich Low_complexity Low_complexity 1 31 0 6 961 685 240 7 20 chr13 49333378 49333527 -70950785 - RSINE1 SINE B4 -17 148 2 6 961 307 282 52 104 chr13 49333811 49333926 -70950386 + B4A SINE B4 43 151 -141 6 961 1468 60 0 11 chr13 49334710 49334895 -70949417 - B2_Mm2 SINE B2 -12 183 1 6 961 234 304 29 19 chr13 49335580 49335684 -70948628 - MIRb SINE MIR -100 168 64 6 961 190 56 56 0 chr13 49336258 49336294 -70948018 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 6 961 571 233 70 8 chr13 49336601 49336777 -70947535 - B3A SINE B2 -6 210 27 6 961 298 260 13 13 chr13 49336918 49336996 -70947316 + ID4 SINE ID 6 83 0 6 961 260 305 28 19 chr13 49336996 49337025 -70947287 + ID_B1 SINE B4 6 113 -111 6 961 298 148 0 53 chr13 49337322 49337379 -70946933 + B4 SINE B4 2 55 -237 6 961 676 102 203 0 chr13 49337434 49337552 -70946760 - B1_Mus1 SINE Alu -1 147 6 6 961 594 263 37 48 chr13 49339195 49339383 -70944929 - ID_B1 SINE B4 -30 194 9 6 961 444 135 0 0 chr13 49339449 49339523 -70944789 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 961 852 121 8 0 chr13 49339881 49340013 -70944299 + B1_Mus2 SINE Alu 14 146 -1 6 961 279 0 0 0 chr13 49340393 49340424 -70943888 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 961 230 296 36 79 chr13 49341100 49341274 -70943038 + MIRc SINE MIR 23 191 -85 6 961 1146 143 11 0 chr13 49342488 49342677 -70941635 + URR1B DNA MER1_type 35 225 0 6 961 281 28 0 0 chr13 49342840 49342876 -70941436 + U2 snRNA snRNA 1 36 -152 6 961 273 57 0 0 chr13 49344219 49344254 -70940058 + (CCCCCT)n Simple_repeat Simple_repeat 2 36 0 6 961 487 250 62 3 chr13 49344414 49344587 -70939725 - B3A SINE B2 -3 192 2 6 961 1095 58 0 41 chr13 49344728 49344873 -70939439 + B1_Mus1 SINE Alu 5 143 -5 6 961 297 0 0 0 chr13 49345093 49345126 -70939186 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 961 283 240 54 63 chr13 49345245 49345356 -70938956 + L1ME4a LINE L1 6015 6124 0 6 961 281 220 0 17 chr13 49345358 49345418 -70938894 + RSINE1 SINE B4 3 61 -104 6 961 450 0 0 0 chr13 49345454 49345504 -70938808 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 961 696 107 0 0 chr13 49345542 49345645 -70938667 + (GGA)n Simple_repeat Simple_repeat 2 104 0 6 961 587 234 0 23 chr13 49345668 49345799 -70938513 - B3A SINE B2 -69 129 2 6 961 366 191 286 0 chr13 49345902 49346007 -70938305 + ID_B1 SINE B4 89 223 -1 6 961 264 241 47 36 chr13 49346035 49346149 -70938163 - MIRb SINE MIR -80 188 77 6 961 1076 336 84 60 chr13 49346982 49347446 -70936866 - MLT1A1-int LTR MaLR -304 1067 593 6 961 760 177 8 0 chr13 49347446 49347576 -70936736 - B1_Mur4 SINE Alu -17 133 3 6 961 1076 336 84 60 chr13 49347576 49347671 -70936641 - MLT1A1-int LTR MaLR -779 592 511 6 961 3120 135 102 17 chr13 49347671 49348199 -70936113 + RMER15 LTR ERVL 3 575 0 6 961 1076 336 84 60 chr13 49348199 49348555 -70935757 - MLT1A1-int LTR MaLR -861 510 129 6 961 230 258 106 24 chr13 49348914 49349037 -70935275 - L1_Rod LINE L1 -8 5839 5707 6 961 1735 188 31 54 chr13 49349043 49349488 -70934824 + RMER10A LTR ERVL 8 442 0 6 961 986 261 101 10 chr13 49349489 49349876 -70934436 - L1M2 LINE L1 -517 5783 5362 6 961 322 242 43 11 chr13 49349877 49349969 -70934343 - MLT1A1 LTR MaLR 0 408 314 6 961 627 228 215 15 chr13 49350138 49350343 -70933969 - ORR1D1 LTR MaLR -14 360 115 6 961 1772 155 3 22 chr13 49350363 49350680 -70933632 + ORR1A4 LTR MaLR 19 329 0 6 961 354 216 45 11 chr13 49350680 49350766 -70933546 - ORR1D1 LTR MaLR -277 93 5 6 961 1217 62 0 0 chr13 49350848 49350994 -70933318 + B1_Mus1 SINE Alu 2 147 -1 6 961 204 111 0 0 chr13 49350994 49351030 -70933282 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 6 961 238 336 53 26 chr13 49351204 49351317 -70932995 - MLT1A1 LTR MaLR -292 116 1 6 961 278 333 8 26 chr13 49351317 49351401 -70932911 - MLT1A1-int LTR MaLR -1270 101 20 6 961 879 228 104 0 chr13 49351541 49351743 -70932569 - URR1B DNA MER1_type 0 225 3 6 961 852 276 220 3 chr13 49351991 49352300 -70932012 + MTEa LTR MaLR 1 376 -3 6 961 486 0 0 0 chr13 49354183 49354237 -70930075 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 961 1113 215 158 27 chr13 49354860 49355195 -70929117 + MTEb LTR MaLR 1 379 0 6 961 3100 253 128 176 chr13 49355195 49356852 -70927460 + MTEb-int LTR MaLR 1 1577 -3 6 961 1578 240 47 3 chr13 49356854 49357217 -70927095 + MTEb LTR MaLR 1 379 0 6 961 205 220 33 33 chr13 49357723 49357784 -70926528 + (CACCT)n Simple_repeat Simple_repeat 1 61 0 6 961 184 211 14 14 chr13 49357792 49357864 -70926448 + (CACCC)n Simple_repeat Simple_repeat 5 76 0 6 961 331 302 116 0 chr13 49360429 49360515 -70923797 + PB1D10 SINE Alu 1 96 -21 6 961 432 55 0 0 chr13 49360540 49360595 -70923717 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 6 961 1224 68 0 0 chr13 49361167 49361314 -70922998 + B1_Mus2 SINE Alu 1 147 0 6 961 653 199 6 0 chr13 49361521 49361697 -70922615 + (CA)n Simple_repeat Simple_repeat 2 178 0 6 961 230 154 0 0 chr13 49362365 49362404 -70921908 + B2_Mm2 SINE B2 2 40 -155 6 961 252 143 0 0 chr13 49362407 49362449 -70921863 + (CAT)n Simple_repeat Simple_repeat 2 43 0 6 961 860 265 130 29 chr13 49363092 49363407 -70920905 + ORR1E LTR MaLR 11 357 -2 6 961 669 73 0 0 chr13 49365544 49365640 -70918672 + (TG)n Simple_repeat Simple_repeat 2 97 0 6 961 1101 102 0 7 chr13 49365680 49365828 -70918484 - B1_Mus1 SINE Alu 0 148 2 6 961 198 94 18 70 chr13 49368021 49368078 -70916234 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 6 961 798 109 0 0 chr13 49368571 49368690 -70915622 + (CA)n Simple_repeat Simple_repeat 2 120 0 6 961 463 278 17 0 chr13 49370764 49370879 -70913433 + PB1D10 SINE Alu 1 117 0 6 961 1008 147 0 0 chr13 49371472 49371615 -70912697 - B1_Mus2 SINE Alu -1 146 4 7 961 383 359 50 25 chr13 49371666 49371826 -70912486 - RSINE1 SINE B4 0 165 2 7 961 1565 192 93 66 chr13 49371975 49372371 -70911941 + MTD LTR MaLR 13 419 0 7 961 1327 246 7 11 chr13 49372419 49372703 -70911609 - B4A SINE B4 -4 288 6 7 961 435 145 0 0 chr13 49372726 49372809 -70911503 + (CA)n Simple_repeat Simple_repeat 1 83 0 7 961 261 0 0 0 chr13 49373080 49373109 -70911203 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 7 961 1887 290 14 4 chr13 49374125 49374637 -70909675 + Lx8 LINE L1 6214 6730 -743 7 961 1262 98 11 0 chr13 49374646 49374820 -70909492 + B2_Mm2 SINE B2 2 177 -18 7 961 226 293 0 79 chr13 49374895 49374958 -70909354 + ID2 SINE ID 1 58 -25 7 961 213 175 0 0 chr13 49374965 49375005 -70909307 + GA-rich Low_complexity Low_complexity 2 41 0 7 961 441 282 22 30 chr13 49375794 49375929 -70908383 - MIR SINE MIR -27 235 102 7 961 271 75 75 0 chr13 49377044 49377097 -70907215 + (TCTCTG)n Simple_repeat Simple_repeat 3 59 0 7 961 186 283 0 0 chr13 49377431 49377477 -70906835 - MIRc SINE MIR -119 149 104 7 961 835 164 13 33 chr13 49378205 49378356 -70905956 - B1_Mur3 SINE Alu -1 148 1 7 961 708 234 122 5 chr13 49378407 49378596 -70905716 + B3 SINE B2 1 211 -5 7 961 374 324 152 11 chr13 49378600 49378784 -70905528 + B4 SINE B4 81 290 -2 7 961 306 259 130 71 chr13 49379413 49379567 -70904745 - B4A SINE B4 -82 210 48 7 961 335 231 21 25 chr13 49380189 49380306 -70904006 + B4 SINE B4 5 123 -169 7 961 565 241 77 14 chr13 49380292 49380435 -70903877 + ID_B1 SINE B4 62 213 -11 7 961 714 215 0 0 chr13 49380473 49380608 -70903704 - B1_Mur1 SINE Alu -1 148 14 7 961 357 252 23 98 chr13 49380514 49380646 -70903666 - MT2B LTR ERVL -341 260 139 7 961 2108 138 0 30 chr13 49380632 49380997 -70903315 + ORR1B1 LTR MaLR 41 394 0 7 961 424 268 11 113 chr13 49381614 49381799 -70902513 + RMER15 LTR ERVL 3 168 -407 7 961 271 294 99 61 chr13 49381812 49381954 -70902358 + RMER15 LTR ERVL 348 482 -93 7 961 180 0 0 0 chr13 49381954 49381974 -70902338 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 7 961 271 294 99 61 chr13 49381974 49382012 -70902300 + RMER15 LTR ERVL 483 534 -41 7 961 569 192 10 29 chr13 49382870 49383183 -70901129 + (TG)n Simple_repeat Simple_repeat 1 306 0 7 961 320 295 130 92 chr13 49383183 49383370 -70900942 - B4A SINE B4 0 292 89 7 961 715 232 132 21 chr13 49383370 49383559 -70900753 - B3 SINE B2 -6 210 1 7 961 320 295 130 92 chr13 49383559 49383610 -70900702 - B4A SINE B4 -204 88 45 7 961 1970 129 77 8 chr13 49383646 49383998 -70900314 + MTC LTR MaLR 37 412 -9 7 961 182 37 0 36 chr13 49384198 49384226 -70900086 + (CCCCCA)n Simple_repeat Simple_repeat 1 27 0 7 961 772 293 28 70 chr13 49384378 49384434 -70899878 - B4 SINE B4 -18 274 218 7 961 182 37 37 0 chr13 49384434 49384461 -70899851 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 7 961 772 293 28 70 chr13 49384461 49384690 -70899622 - B4 SINE B4 -75 217 3 7 961 217 313 30 0 chr13 49385289 49385356 -70898956 + ID4 SINE ID 4 72 -11 7 961 261 310 49 49 chr13 49385899 49386082 -70898230 + L1M4c LINE L1 1118 1300 -5013 7 961 604 114 0 0 chr13 49386095 49386183 -70898129 - B2_Mm2 SINE B2 -107 88 1 7 961 27 0 0 0 chr13 49386227 49386254 -70898058 + AT_rich Low_complexity Low_complexity 1 27 0 7 961 726 272 93 20 chr13 49386282 49386558 -70897754 + B4A SINE B4 3 290 -2 7 961 261 0 0 0 chr13 49386567 49386596 -70897716 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 961 288 0 0 0 chr13 49386596 49386627 -70897685 + (GA)n Simple_repeat Simple_repeat 2 33 0 7 961 1185 160 24 28 chr13 49386867 49387079 -70897233 - B3 SINE B2 -1 215 5 7 961 1121 187 58 10 chr13 49387111 49387316 -70896996 - B3 SINE B2 -1 215 1 7 961 379 320 125 0 chr13 49387317 49387525 -70896787 + L1M4c LINE L1 1183 1383 -5001 7 961 398 292 29 18 chr13 49387546 49387686 -70896626 + PB1D7 SINE Alu 13 146 -1 7 961 284 306 77 41 chr13 49387718 49387912 -70896400 + L1M4c LINE L1 1471 1671 -4713 7 961 812 190 118 11 chr13 49387922 49388108 -70896204 + B3 SINE B2 6 211 -5 7 961 709 299 28 69 chr13 49388215 49388413 -70895899 + B4A SINE B4 14 214 -78 7 961 2968 68 59 16 chr13 49388413 49388801 -70895511 + MTB_Mm LTR MaLR 3 407 0 7 961 709 299 28 69 chr13 49388801 49388893 -70895419 + B4A SINE B4 215 292 0 7 961 261 0 0 0 chr13 49388904 49388933 -70895379 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 7 961 323 238 12 12 chr13 49389000 49389081 -70895231 + ID4_ SINE ID 1 81 -2 7 961 311 284 34 11 chr13 49389083 49389172 -70895140 + B1F1 SINE Alu 5 95 -54 7 961 266 260 35 88 chr13 49389595 49389709 -70894603 + PB1D7 SINE Alu 1 108 -12 7 961 314 269 0 0 chr13 49389707 49389774 -70894538 - ID_B1 SINE B4 -21 203 137 7 961 427 286 20 10 chr13 49389961 49390060 -70894252 + RSINE1 SINE B4 31 130 -35 7 961 391 317 132 31 chr13 49390220 49390477 -70893835 + L1M4c LINE L1 2772 3054 -3328 7 961 425 288 84 24 chr13 49390506 49390673 -70893639 + B4A SINE B4 111 287 -5 7 961 227 182 273 0 chr13 49390784 49390839 -70893473 + ID4_ SINE ID 4 73 -10 7 961 354 23 0 0 chr13 49390840 49390883 -70893429 + (GA)n Simple_repeat Simple_repeat 2 44 0 7 961 440 296 136 52 chr13 49390896 49391374 -70892938 + L1M4c LINE L1 3288 3805 -2571 7 961 672 71 0 0 chr13 49391378 49391477 -70892835 + (TC)n Simple_repeat Simple_repeat 1 99 0 7 961 1300 21 0 0 chr13 49392403 49392548 -70891764 + B1_Mm SINE Alu 1 145 -2 7 961 692 261 113 34 chr13 49392571 49392837 -70891475 + B4A SINE B4 2 288 -4 7 961 930 285 83 8 chr13 49394711 49394976 -70889336 - B4A SINE B4 -6 286 2 7 961 427 248 10 29 chr13 49394981 49395085 -70889227 - ID_B1 SINE B4 -8 216 115 7 961 960 121 7 0 chr13 49395178 49395318 -70888994 + B1_Mur4 SINE Alu 10 150 0 7 961 581 298 157 8 chr13 49395354 49395845 -70888467 + L1MEc LINE L1 115 678 -5722 7 961 295 197 0 15 chr13 49395893 49395960 -70888352 + L1MEc LINE L1 771 836 -5564 7 961 692 245 106 50 chr13 49395960 49396158 -70888154 + ID_B1 SINE B4 3 211 -13 7 961 198 91 0 0 chr13 49396159 49396192 -70888120 + (T)n Simple_repeat Simple_repeat 1 33 0 7 961 277 195 221 84 chr13 49396685 49396780 -70887532 - B1F SINE Alu -5 112 5 7 961 405 0 0 0 chr13 49397414 49397459 -70886853 + (TG)n Simple_repeat Simple_repeat 1 45 0 7 961 292 300 0 0 chr13 49397461 49397531 -70886781 - ID4_ SINE ID -11 72 3 7 961 283 240 0 0 chr13 49398040 49398090 -70886222 - PB1D9 SINE Alu -70 50 1 7 961 627 81 0 0 chr13 49398146 49398245 -70886067 + (GA)n Simple_repeat Simple_repeat 1 99 0 7 961 494 322 0 45 chr13 49398245 49398391 -70885921 - RSINE1 SINE B4 -23 142 4 7 961 351 240 0 0 chr13 49398438 49398542 -70885770 + (TG)n Simple_repeat Simple_repeat 1 104 0 7 961 586 229 62 44 chr13 49398543 49398703 -70885609 - RSINE1 SINE B4 -1 164 2 7 961 218 32 32 0 chr13 49399130 49399161 -70885151 + (TCC)n Simple_repeat Simple_repeat 2 33 0 7 961 1270 296 83 12 chr13 49400130 49400633 -70883679 - Lx8 LINE L1 -6 7467 6929 7 961 1664 305 91 36 chr13 49400647 49400785 -70883527 + Lx8 LINE L1 6036 6202 -1271 7 961 212 54 54 0 chr13 49400785 49400822 -70883490 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 7 961 1664 305 91 36 chr13 49400822 49401495 -70882817 + Lx8 LINE L1 6203 6891 -582 7 961 21 0 0 0 chr13 49401894 49401915 -70882397 + GC_rich Low_complexity Low_complexity 1 21 0 7 961 498 246 24 48 chr13 49403206 49403330 -70880982 + B4 SINE B4 172 292 0 7 961 816 131 7 68 chr13 49403355 49403502 -70880810 - B1_Mus1 SINE Alu 0 148 11 7 961 398 265 104 17 chr13 49405230 49405364 -70878948 - B1F SINE Alu 0 149 6 7 961 405 0 0 0 chr13 49405378 49405423 -70878889 + (TC)n Simple_repeat Simple_repeat 2 46 0 7 961 285 29 0 0 chr13 49405423 49405456 -70878856 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 961 270 306 0 0 chr13 49405458 49405520 -70878792 - B4A SINE B4 -14 278 217 7 961 243 146 0 0 chr13 49405521 49405562 -70878750 + (TTG)n Simple_repeat Simple_repeat 2 42 0 7 961 330 236 357 6 chr13 49405583 49405726 -70878586 - B4A SINE B4 -98 194 2 7 961 198 250 0 0 chr13 49405759 49405815 -70878497 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 7 961 687 224 7 45 chr13 49406340 49406494 -70877818 + B1_Mur1 SINE Alu 2 149 0 7 961 215 217 17 0 chr13 49406494 49406554 -70877758 + GA-rich Low_complexity Low_complexity 4 64 0 7 961 541 301 138 54 chr13 49406637 49406678 -70877634 + MLT1F LTR MaLR 11 51 -497 7 961 1402 66 55 0 chr13 49406678 49406860 -70877452 - B2_Mm2 SINE B2 -3 192 1 7 961 541 301 138 54 chr13 49406860 49407152 -70877160 + MLT1F LTR MaLR 52 372 -176 7 961 233 260 60 0 chr13 49407326 49407376 -70876936 - B4A SINE B4 -16 276 224 7 961 441 291 100 43 chr13 49407405 49407545 -70876767 - RSINE1 SINE B4 0 165 18 7 961 296 279 43 35 chr13 49407545 49407686 -70876626 + RLTR42-int LTR ERVK 1236 1377 -4145 7 961 576 54 32 0 chr13 49408024 49408117 -70876195 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 7 961 1300 97 17 0 chr13 49408130 49408306 -70876006 - B2_Mm1t SINE B2 -14 179 1 7 961 1013 82 35 0 chr13 49408312 49408569 -70875743 + (TCTA)n Simple_repeat Simple_repeat 1 266 0 7 961 765 196 12 56 chr13 49408676 49408838 -70875474 - B4A SINE B4 -63 229 75 7 961 313 148 48 32 chr13 49408872 49408935 -70875377 + MLT1F LTR MaLR 485 548 0 7 961 588 320 73 55 chr13 49409085 49409412 -70874900 - ORR1E LTR MaLR -5 354 22 7 961 699 245 34 17 chr13 49409395 49409561 -70874751 + ID_B1 SINE B4 86 250 -42 7 961 249 255 0 0 chr13 49409533 49409580 -70874732 - ORR1E LTR MaLR -312 47 1 7 961 451 276 70 134 chr13 49409971 49410046 -70874266 - B4 SINE B4 -6 286 99 7 961 577 200 79 48 chr13 49410046 49410172 -70874140 - B1_Mur1 SINE Alu -6 143 14 7 961 608 301 13 6 chr13 49410177 49410334 -70873978 - B4 SINE B4 -65 227 70 7 961 2103 104 3 23 chr13 49410362 49410667 -70873645 - ORR1A4 LTR MaLR 0 329 31 7 961 723 303 115 36 chr13 49410686 49410731 -70873581 - B4A SINE B4 -18 274 233 7 961 878 200 64 16 chr13 49410731 49410752 -70873560 - B3 SINE B2 -19 197 167 8 961 279 0 0 0 chr13 49410752 49410783 -70873529 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 961 878 200 64 16 chr13 49410783 49410949 -70873363 - B3 SINE B2 -50 166 2 8 961 723 286 80 54 chr13 49410949 49411235 -70873077 - B4A SINE B4 -60 232 2 7 961 673 284 104 47 chr13 49412818 49413010 -70871302 + ID_B1 SINE B4 2 204 -20 8 962 995 199 21 16 chr13 49414163 49414352 -70869960 - URR1A DNA MER1_type 0 226 37 8 962 399 289 104 45 chr13 49414395 49414529 -70869783 + ID_B1 SINE B4 82 223 -1 8 962 894 45 0 0 chr13 49414557 49414668 -70869644 + (GGGAA)n Simple_repeat Simple_repeat 2 112 0 8 962 186 43 0 0 chr13 49415999 49416022 -70868290 + (TG)n Simple_repeat Simple_repeat 2 24 0 8 962 400 317 28 20 chr13 49417124 49417272 -70867040 - PB1D10 SINE Alu 0 149 1 8 962 668 262 75 0 chr13 49417272 49417338 -70866974 - ID SINE ID -141 83 6 8 962 455 219 302 12 chr13 49418060 49418232 -70866080 + ID_B1 SINE B4 3 224 0 8 962 207 221 0 34 chr13 49418617 49418706 -70865606 + CT-rich Low_complexity Low_complexity 3 88 0 8 962 332 315 45 104 chr13 49418709 49418911 -70865401 - B4 SINE B4 0 292 103 8 962 221 318 0 0 chr13 49419015 49419078 -70865234 - PB1D10 SINE Alu -49 68 6 8 962 815 186 117 6 chr13 49419389 49419551 -70864761 + ID_B1 SINE B4 12 191 -33 8 962 436 288 22 36 chr13 49419579 49419716 -70864596 + B4A SINE B4 8 142 -150 8 962 567 40 0 0 chr13 49419922 49419996 -70864316 + (CAGAGA)n Simple_repeat Simple_repeat 2 75 0 8 962 260 229 136 56 chr13 49420635 49420730 -70863582 - MER45B DNA Tip100 -103 937 827 8 962 495 266 148 25 chr13 49420730 49420892 -70863420 + B3A SINE B2 1 182 -16 8 962 300 53 0 0 chr13 49420902 49420940 -70863372 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 8 962 260 229 136 56 chr13 49420940 49420958 -70863354 - MER45B DNA Tip100 -223 817 803 8 962 683 204 88 23 chr13 49420958 49421129 -70863183 - Lx4B LINE L1 -24 7034 6853 8 962 333 0 0 0 chr13 49421235 49421272 -70863040 + (TG)n Simple_repeat Simple_repeat 1 37 0 8 962 230 268 0 0 chr13 49421281 49421322 -70862990 - B4A SINE B4 -25 267 227 8 962 369 197 66 0 chr13 49421336 49421412 -70862900 - ID2 SINE ID -2 81 1 8 962 786 208 21 0 chr13 49421412 49421552 -70862760 - B4A SINE B4 -65 227 85 8 962 441 0 0 0 chr13 49422439 49422488 -70861824 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 962 292 234 159 18 chr13 49422967 49423080 -70861232 + MLT1A0 LTR MaLR 44 172 -193 8 962 285 98 0 0 chr13 49423874 49423915 -70860397 + (A)n Simple_repeat Simple_repeat 1 41 0 8 962 227 226 15 46 chr13 49423941 49424006 -70860306 + L1M4 LINE L1 1278 1340 -5294 8 962 2255 65 74 3 chr13 49424137 49424469 -70859843 + ORR1A1 LTR MaLR 12 386 -8 8 962 13069 75 24 17 chr13 49424473 49425272 -70859040 + ORR1A1-int LTR MaLR 1 806 -986 8 962 1136 70 28 0 chr13 49425272 49425414 -70858898 + B1_Mm SINE Alu 2 147 0 8 962 13069 75 24 17 chr13 49425414 49426395 -70857917 + ORR1A1-int LTR MaLR 807 1792 0 8 962 2286 56 131 0 chr13 49426395 49426701 -70857611 + ORR1A1 LTR MaLR 1 346 0 8 962 303 224 39 13 chr13 49426710 49426787 -70857525 + L1M4 LINE L1 1388 1466 -5076 8 962 368 197 0 14 chr13 49427019 49427091 -70857221 + B4A SINE B4 2 72 -220 8 962 4061 142 88 105 chr13 49427191 49427687 -70856625 + RMER19B LTR ERVK 2 458 -444 8 962 3451 35 5 0 chr13 49427687 49428081 -70856231 - MTA_Mm LTR MaLR 0 396 1 8 962 4061 142 88 105 chr13 49428081 49428488 -70855824 + RMER19B LTR ERVK 459 890 -12 8 962 270 274 0 87 chr13 49428461 49428553 -70855759 + B4A SINE B4 209 292 0 8 962 240 170 0 0 chr13 49428556 49428609 -70855703 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 962 556 275 7 21 chr13 49428754 49428895 -70855417 - ID_B1 SINE B4 -2 222 84 8 962 834 211 119 11 chr13 49428936 49429080 -70855232 + B3A SINE B2 3 166 -32 8 962 2576 107 28 127 chr13 49429080 49429583 -70854729 - RLTR11B LTR ERVK 0 453 1 8 962 834 211 119 11 chr13 49429583 49429598 -70854714 + B3A SINE B2 167 182 -16 8 962 384 71 0 0 chr13 49429598 49429654 -70854658 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 962 834 211 119 11 chr13 49429654 49429670 -70854642 + B3A SINE B2 183 197 -1 8 962 360 265 19 37 chr13 49430285 49430433 -70853879 + MTEb LTR MaLR 230 372 -7 8 962 230 273 204 85 chr13 49430551 49430727 -70853585 - MLT1B LTR MaLR -193 197 1 8 962 269 242 32 0 chr13 49430827 49430889 -70853423 - B1F1 SINE Alu -13 136 73 8 962 625 304 6 6 chr13 49430927 49431086 -70853226 + B4A SINE B4 1 159 -133 8 962 497 319 73 27 chr13 49431278 49431497 -70852815 + MER63C DNA AcHobo 158 385 -545 8 962 940 241 19 19 chr13 49431497 49431713 -70852599 - B3 SINE B2 0 216 1 8 962 458 297 66 77 chr13 49431713 49431752 -70852560 + MER63C DNA AcHobo 386 413 -517 8 962 327 304 106 138 chr13 49431787 49431940 -70852372 + MLT1B LTR MaLR 1 141 -233 8 962 623 278 71 36 chr13 49431940 49432212 -70852100 + B4A SINE B4 1 282 -10 8 962 375 23 0 0 chr13 49432212 49432256 -70852056 + (TG)n Simple_repeat Simple_repeat 1 44 0 8 962 267 31 0 0 chr13 49432265 49432297 -70852015 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 962 338 301 120 34 chr13 49432297 49432522 -70851790 + MLT1B LTR MaLR 137 390 0 8 962 473 167 87 10 chr13 49432696 49432799 -70851513 + B1_Mur4 SINE Alu 40 150 0 8 962 248 254 0 15 chr13 49432799 49432867 -70851445 + A-rich Low_complexity Low_complexity 3 69 0 8 962 363 127 0 0 chr13 49433067 49433130 -70851182 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 8 962 457 235 87 0 chr13 49433151 49433266 -70851046 - L1M4 LINE L1 -1041 5105 4981 8 962 246 200 0 20 chr13 49433342 49433393 -70850919 - L1M4 LINE L1 -1298 4848 4799 8 962 249 226 16 16 chr13 49433411 49433474 -70850838 - L1M4 LINE L1 -1525 4621 4559 8 962 180 0 0 0 chr13 49433689 49433709 -70850603 + (TG)n Simple_repeat Simple_repeat 2 21 0 8 962 515 296 16 0 chr13 49433713 49433838 -70850474 - RSINE1 SINE B4 -36 129 3 8 962 181 161 0 0 chr13 49434533 49434564 -70849748 - L2a LINE L2 -92 3334 3304 8 962 204 238 24 0 chr13 49434865 49434907 -70849405 + MIR3 SINE MIR 117 159 -49 8 962 441 0 0 0 chr13 49435026 49435075 -70849237 + (TC)n Simple_repeat Simple_repeat 2 50 0 8 962 758 187 67 0 chr13 49435566 49435700 -70848612 - B1F2 SINE Alu -6 143 1 8 962 637 249 39 51 chr13 49435700 49435738 -70848574 - ID_B1 SINE B4 0 204 49 8 962 335 119 0 15 chr13 49435753 49435821 -70848491 + (TG)n Simple_repeat Simple_repeat 1 67 0 8 962 226 346 26 0 chr13 49435838 49435916 -70848396 - RSINE1 SINE B4 -8 157 78 8 962 301 295 58 45 chr13 49435978 49436134 -70848178 - B4 SINE B4 -131 161 4 8 962 448 264 25 57 chr13 49436134 49436289 -70848023 - MER73 LTR ERVL -428 216 67 8 962 201 174 22 0 chr13 49436936 49436982 -70847330 + (CGG)n Simple_repeat Simple_repeat 3 49 0 8 962 241 328 8 78 chr13 49438121 49438250 -70846062 + MIRb SINE MIR 36 155 -113 8 962 363 331 19 84 chr13 49442390 49442418 -70841894 + Tigger9b DNA MER2_type 39 66 -558 8 962 3362 36 10 0 chr13 49442418 49442810 -70841502 + MTA_Mm LTR MaLR 1 396 0 8 962 363 331 19 84 chr13 49442810 49442881 -70841431 + Tigger9b DNA MER2_type 67 134 -490 8 962 674 273 119 0 chr13 49442881 49443075 -70841237 + ID_B1 SINE B4 2 218 -6 8 962 363 331 19 84 chr13 49443075 49443129 -70841183 + Tigger9b DNA MER2_type 135 183 -441 8 962 321 292 90 13 chr13 49443166 49443322 -70840990 + Tigger9b DNA MER2_type 299 466 -158 8 962 783 319 78 13 chr13 49443351 49443799 -70840513 - L1MC3 LINE L1 -32 7753 7277 8 962 511 284 206 48 chr13 49444106 49444251 -70840061 - L1MC3 LINE L1 -766 7019 6874 8 962 378 0 0 0 chr13 49444251 49444293 -70840019 + (TC)n Simple_repeat Simple_repeat 2 43 0 8 962 261 0 0 0 chr13 49444293 49444321 -70839991 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 962 511 284 206 48 chr13 49444321 49444342 -70839970 - L1MC3 LINE L1 -912 6873 6861 8 962 909 236 119 23 chr13 49444342 49444602 -70839710 - B4A SINE B4 -7 285 1 8 962 511 284 265 39 chr13 49444602 49445187 -70839125 - L1MC3 LINE L1 -925 6860 6115 8 962 372 22 0 0 chr13 49445187 49445232 -70839080 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 962 349 274 108 13 chr13 49445232 49445391 -70838921 - L1MC3 LINE L1 -1671 6114 5911 8 962 273 239 30 0 chr13 49445429 49445496 -70838816 - L1MC3 LINE L1 -2022 5763 5695 8 962 307 318 85 25 chr13 49445522 49445722 -70838590 - L1MC3 LINE L1 -738 5595 5384 8 962 622 285 175 16 chr13 49445834 49446319 -70837993 - L1MC3 LINE L1 -825 5321 4760 8 962 652 262 132 48 chr13 49446454 49446703 -70837609 - B4A SINE B4 -16 276 7 8 962 417 221 47 0 chr13 49446766 49446852 -70837460 - RSINE1 SINE B4 -38 127 38 8 962 247 218 121 60 chr13 49447259 49447342 -70836970 - MLT1A LTR MaLR -76 332 237 8 962 188 306 20 0 chr13 49448825 49448874 -70835438 + MIRc SINE MIR 107 156 -112 8 962 191 296 56 0 chr13 49449126 49449197 -70835115 + MER5B DNA MER1_type 17 91 -87 8 962 613 176 148 24 chr13 49449876 49450045 -70834267 - B2_Mm2 SINE B2 -3 192 3 8 962 863 216 111 0 chr13 49450163 49450353 -70833959 + B3 SINE B2 6 216 0 8 962 641 255 87 48 chr13 49450366 49450390 -70833922 - B3 SINE B2 0 216 195 8 962 539 187 53 9 chr13 49450390 49450503 -70833809 + PB1D9 SINE Alu 1 118 -2 8 962 201 94 0 0 chr13 49450504 49450536 -70833776 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 962 717 255 87 48 chr13 49450536 49450715 -70833597 - B3A SINE B2 -22 194 3 8 962 407 215 83 18 chr13 49451968 49452077 -70832235 - PB1D10 SINE Alu -1 116 1 8 962 409 256 12 0 chr13 49451999 49452085 -70832227 - ID_B1 SINE B4 -64 160 74 8 962 628 230 21 7 chr13 49452085 49452225 -70832087 - B1_Mur1 SINE Alu -7 142 1 8 962 347 203 16 0 chr13 49452664 49452728 -70831584 - RSINE1 SINE B4 -98 67 3 8 962 795 260 26 10 chr13 49452810 49453004 -70831308 - B3A SINE B2 0 198 2 8 962 387 288 43 158 chr13 49454055 49454434 -70829878 - ORR1E LTR MaLR 0 379 25 8 962 427 246 148 0 chr13 49454525 49454647 -70829665 + B1F SINE Alu 2 141 -8 8 962 254 26 0 50 chr13 49454723 49454763 -70829549 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 8 962 545 128 266 0 chr13 49454763 49454872 -70829440 - B1_Mus1 SINE Alu -10 138 1 8 962 576 282 55 87 chr13 49454879 49454997 -70829315 + L1MB7 LINE L1 5710 5816 -368 8 962 1393 61 17 0 chr13 49454997 49455177 -70829135 + B2_Mm2 SINE B2 3 185 -10 8 962 576 282 55 87 chr13 49455177 49455462 -70828850 + L1MB7 LINE L1 5817 6100 -84 8 962 453 254 163 5 chr13 49455567 49455757 -70828555 + ID_B1 SINE B4 5 224 0 8 962 21 0 0 0 chr13 49456030 49456051 -70828261 + AT_rich Low_complexity Low_complexity 1 21 0 8 962 22 35 0 0 chr13 49456076 49456105 -70828207 + AT_rich Low_complexity Low_complexity 1 29 0 8 962 304 274 43 34 chr13 49461048 49461165 -70823147 - L1MD3 LINE L1 -2115 6053 5936 8 962 284 344 70 44 chr13 49461181 49461339 -70822973 - RSINE1 SINE B4 -3 162 1 8 962 277 355 18 18 chr13 49461355 49461464 -70822848 - B4A SINE B4 -169 123 15 8 962 240 224 42 103 chr13 49461472 49461587 -70822725 - PB1 SINE Alu -2 115 1 8 962 596 173 12 0 chr13 49461616 49461789 -70822523 + (TCTG)n Simple_repeat Simple_repeat 4 178 0 9 962 305 294 19 10 chr13 49461916 49462019 -70822293 - L1MD3 LINE L1 -1444 4875 4772 8 962 24 0 0 0 chr13 49462100 49462124 -70822188 + AT_rich Low_complexity Low_complexity 1 24 0 9 962 335 275 146 5 chr13 49462370 49462589 -70821723 - L1MD3 LINE L1 -5604 796 547 8 962 390 333 38 19 chr13 49462869 49463028 -70821284 - RSINE1 SINE B4 -1 164 3 9 962 390 154 15 0 chr13 49468527 49468592 -70815720 + CT-rich Low_complexity Low_complexity 2 67 0 9 962 684 0 0 0 chr13 49468592 49468668 -70815644 + (TTTC)n Simple_repeat Simple_repeat 2 77 0 9 962 925 84 0 8 chr13 49468670 49468802 -70815510 - B2_Mm2 SINE B2 -25 170 40 9 962 211 213 21 0 chr13 49468868 49468915 -70815397 + CT-rich Low_complexity Low_complexity 2 49 0 9 962 219 272 0 110 chr13 49469473 49469499 -70814813 - ID_B1 SINE B4 -120 104 24 9 962 294 180 0 62 chr13 49469499 49469564 -70814748 - ID2 SINE ID 0 83 23 9 962 780 275 14 0 chr13 49469636 49469854 -70814458 - L1MB5 LINE L1 -226 5948 5728 9 962 284 187 17 216 chr13 49470992 49471108 -70813204 - RMER15 LTR ERVL -87 488 396 9 962 273 308 0 194 chr13 49471349 49471478 -70812834 - RMER15 LTR ERVL -136 439 336 9 962 422 299 0 33 chr13 49471603 49471755 -70812557 - Lx8 LINE L1 -294 7179 7033 9 962 375 245 0 69 chr13 49472718 49472819 -70811493 + RSINE1 SINE B4 4 97 -68 9 962 499 122 111 0 chr13 49477039 49477129 -70807183 - B1F2 SINE Alu -5 144 45 9 962 180 125 0 0 chr13 49477131 49477163 -70807149 + (CCCCCA)n Simple_repeat Simple_repeat 3 34 0 9 962 1508 188 149 9 chr13 49477801 49478150 -70806162 - MTD LTR MaLR -20 399 2 9 962 236 200 144 0 chr13 49482916 49483006 -70801306 + L1M4 LINE L1 3228 3330 -2816 9 962 527 147 0 10 chr13 49483007 49483110 -70801202 + (TA)n Simple_repeat Simple_repeat 1 102 0 9 962 1235 121 16 0 chr13 49483171 49483361 -70800951 + B2_Mm1t SINE B2 1 193 0 9 962 3287 80 28 0 chr13 49483361 49483825 -70800487 + L1_Mus3 LINE L1 6161 6637 -1 9 962 616 311 20 3 chr13 49483879 49484088 -70800224 + B3A SINE B2 2 216 0 9 962 937 144 197 16 chr13 49484469 49484652 -70799660 + B3 SINE B2 1 216 0 9 962 526 270 73 77 chr13 49484673 49484934 -70799378 + MLT-int LTR MaLR 435 694 -1041 9 962 246 301 18 88 chr13 49484996 49485109 -70799203 + MLT-int LTR MaLR 958 1062 -673 9 962 332 293 148 38 chr13 49485280 49485490 -70798822 + MLT-int LTR MaLR 1367 1567 -168 9 962 533 266 33 6 chr13 49485552 49485714 -70798598 + MLT1A0 LTR MaLR 2 165 -243 9 962 477 221 50 7 chr13 49485750 49485891 -70798421 + L1MC LINE L1 2429 2575 -3571 9 962 448 232 128 0 chr13 49485891 49486016 -70798296 + B1F2 SINE Alu 3 143 -6 9 962 202 139 28 0 chr13 49486088 49486124 -70798188 + (TG)n Simple_repeat Simple_repeat 1 37 0 9 962 839 279 99 0 chr13 49486138 49486521 -70797791 + L1MC LINE L1 2583 3003 -3143 9 962 340 327 127 44 chr13 49486519 49486794 -70797518 + L1MC LINE L1 3132 3429 -2717 9 962 1059 208 18 23 chr13 49486852 49487069 -70797243 - B3 SINE B2 0 216 1 9 962 29 60 0 0 chr13 49487069 49487119 -70797193 + AT_rich Low_complexity Low_complexity 1 50 0 9 962 278 301 110 58 chr13 49487182 49487337 -70796975 - RSINE1 SINE B4 0 165 3 9 962 204 67 0 0 chr13 49487350 49487380 -70796932 + (A)n Simple_repeat Simple_repeat 1 30 0 9 962 609 185 92 49 chr13 49487384 49487526 -70796786 + B1_Mur4 SINE Alu 2 149 -1 9 962 240 241 0 0 chr13 49487775 49487829 -70796483 + L1MCa LINE L1 2067 2120 -4388 9 962 580 237 151 0 chr13 49487932 49488067 -70796245 + B3A SINE B2 2 159 -39 9 962 243 0 0 0 chr13 49488067 49488094 -70796218 + (TG)n Simple_repeat Simple_repeat 1 27 0 9 962 580 251 82 60 chr13 49488094 49488153 -70796159 + B3A SINE B2 142 191 -4 9 962 826 224 66 5 chr13 49488156 49488353 -70795959 + B3 SINE B2 2 210 -6 9 962 617 200 216 6 chr13 49488479 49488660 -70795652 - ID_B1 SINE B4 -5 219 1 9 962 374 250 199 23 chr13 49488676 49488807 -70795505 - RSINE1 SINE B4 -2 163 10 9 962 752 231 142 30 chr13 49489002 49489270 -70795042 - MER89 LTR ERV1 -244 315 18 9 962 320 268 103 0 chr13 49489286 49489383 -70794929 + L1MC LINE L1 5302 5408 -776 9 962 472 224 144 0 chr13 49489631 49489756 -70794556 - ID_B1 SINE B4 0 224 82 9 962 263 308 25 24 chr13 49489770 49489885 -70794427 - B1_Mm SINE Alu 0 120 6 9 962 302 381 54 36 chr13 49489891 49490057 -70794255 + L1MC LINE L1 5636 5804 -375 9 962 442 186 118 0 chr13 49490890 49490992 -70793320 - PB1D10 SINE Alu 0 117 4 9 962 387 274 121 0 chr13 49491998 49492122 -70792190 + ID_B1 SINE B4 82 220 -4 9 962 180 0 0 0 chr13 49492556 49492576 -70791736 + (TG)n Simple_repeat Simple_repeat 2 21 0 9 962 411 281 55 114 chr13 49492578 49492620 -70791692 - B4A SINE B4 -35 257 126 9 962 701 221 21 21 chr13 49492620 49492763 -70791549 - B1_Mur1 SINE Alu -6 143 1 9 962 411 281 55 114 chr13 49492763 49492779 -70791533 - B4A SINE B4 -35 125 69 9 962 565 246 118 0 chr13 49492814 49493001 -70791311 + B3 SINE B2 1 209 -7 9 962 250 196 0 0 chr13 49493378 49493424 -70790888 + AluF_3 SINE Alu 137 182 -129 9 962 225 145 32 16 chr13 49493484 49493547 -70790765 + GA-rich Low_complexity Low_complexity 3 66 0 9 962 572 276 40 121 chr13 49493860 49493922 -70790390 - RLTR26 LTR ERVK -225 417 369 9 962 2794 28 45 6 chr13 49493922 49494276 -70790036 + L1Md_F2 LINE L1 6203 6570 -12 9 962 572 289 48 104 chr13 49494276 49494545 -70789767 - RLTR26 LTR ERVK -214 413 131 9 962 231 146 0 47 chr13 49494541 49494584 -70789728 - RMER13A LTR ERVK -805 55 15 9 962 277 314 12 0 chr13 49495662 49495748 -70788564 + MER20 DNA MER1_type 55 141 -78 9 962 387 0 0 0 chr13 49495779 49495822 -70788490 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 962 382 231 0 62 chr13 49496043 49496140 -70788172 + MLT1A0 LTR MaLR 1 91 -274 9 962 356 200 80 50 chr13 49496213 49496313 -70787999 + MLT1A0 LTR MaLR 256 358 -7 9 962 453 248 0 0 chr13 49496737 49496846 -70787466 + PB1D9 SINE Alu 1 109 -11 9 962 1224 206 102 24 chr13 49496918 49497251 -70787061 + MTE2b LTR MaLR 20 378 -1 9 962 395 200 0 0 chr13 49498488 49498563 -70785749 + B3A SINE B2 32 106 -92 9 962 22 0 0 0 chr13 49498649 49498671 -70785641 + AT_rich Low_complexity Low_complexity 1 22 0 9 962 206 136 23 0 chr13 49498927 49498971 -70785341 + (TCCA)n Simple_repeat Simple_repeat 2 46 0 9 962 22 0 0 0 chr13 49499064 49499086 -70785226 + AT_rich Low_complexity Low_complexity 1 22 0 9 962 283 136 242 0 chr13 49499348 49499414 -70784898 - RLTR23 LTR ERV1 0 430 349 9 962 336 269 66 56 chr13 49500000 49500184 -70784128 - B4 SINE B4 -11 281 85 1 962 355 311 21 43 chr13 49500166 49500307 -70784005 + B4A SINE B4 155 292 0 2 962 663 239 201 70 chr13 49500375 49500704 -70783608 - MTE2a LTR MaLR 0 379 8 3 962 287 129 230 23 chr13 49501110 49501197 -70783115 - PB1D10 SINE Alu -1 116 12 4 962 273 217 43 0 chr13 49501137 49501206 -70783106 - ID_B1 SINE B4 -72 152 81 5 962 570 294 114 31 chr13 49501222 49501561 -70782751 - L1MC2 LINE L1 -156 6198 5837 6 962 881 181 0 20 chr13 49501563 49501715 -70782597 - B1_Mur3 SINE Alu 0 149 1 7 962 1346 178 5 0 chr13 49501727 49501946 -70782366 + URR1B DNA MER1_type 1 220 -5 8 962 565 271 40 73 chr13 49501729 49501976 -70782336 - CYRA11_Mm Unknown Y-chromosome -233 384 146 9 962 603 126 0 0 chr13 49502097 49502192 -70782120 + (TTTC)n Simple_repeat Simple_repeat 4 98 0 1 962 749 232 107 19 chr13 49502201 49502473 -70781839 - L1MC2 LINE L1 -914 5605 5283 6 962 454 72 0 14 chr13 49502473 49502543 -70781769 - L1Md_F2 LINE L1 -11 6571 6503 1 962 749 222 67 24 chr13 49502543 49502568 -70781744 - L1MC2 LINE L1 -1039 5282 5259 6 962 639 177 137 8 chr13 49502574 49502693 -70781619 + B1_Mur1 SINE Alu 2 138 -11 1 962 1312 56 6 6 chr13 49502693 49502872 -70781440 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 1 962 639 177 137 8 chr13 49502872 49502883 -70781429 + B1_Mur1 SINE Alu 139 149 0 1 962 576 298 0 8 chr13 49502948 49503073 -70781239 + RSINE1 SINE B4 25 148 -17 1 962 493 256 17 8 chr13 49503139 49503244 -70781068 + PB1D7 SINE Alu 1 107 -13 1 962 522 0 0 0 chr13 49503244 49503302 -70781010 + (CAAAC)n Simple_repeat Simple_repeat 1 58 0 1 962 493 256 17 8 chr13 49503302 49503314 -70780998 + PB1D7 SINE Alu 108 119 -1 1 962 538 252 190 4 chr13 49503325 49503572 -70780740 - L1MC2 LINE L1 -5517 991 699 6 962 308 337 56 71 chr13 49503947 49504145 -70780167 - L1MC2 LINE L1 -6139 369 175 6 962 1123 281 73 75 chr13 49504268 49504722 -70779590 - RMER13A LTR ERVK -394 466 14 1 962 1415 126 112 12 chr13 49504741 49504990 -70779322 - ORR1B1 LTR MaLR -120 274 1 1 962 411 162 0 0 chr13 49505141 49505221 -70779091 + CT-rich Low_complexity Low_complexity 1 80 0 1 962 369 250 10 42 chr13 49505222 49505318 -70778994 - ID_B1 SINE B4 -2 222 130 2 962 326 238 65 19 chr13 49505353 49505460 -70778852 - MLT1A1 LTR MaLR -294 114 3 2 962 495 268 70 16 chr13 49505506 49505635 -70778677 - ID_B1 SINE B4 -8 216 81 2 962 252 286 0 0 chr13 49505664 49505720 -70778592 + ID4 SINE ID 2 57 -26 2 962 2349 171 27 5 chr13 49505933 49506338 -70777974 + MTC LTR MaLR 1 414 -7 2 962 359 197 127 25 chr13 49506660 49506770 -70777542 - B3 SINE B2 -3 195 74 2 962 227 94 0 0 chr13 49506829 49506861 -70777451 + URR1B DNA MER1_type 192 223 -2 8 962 675 200 0 9 chr13 49506866 49506982 -70777330 - B3A SINE B2 -83 115 1 2 962 285 282 51 13 chr13 49507116 49507195 -70777117 + ID2 SINE ID 2 83 0 2 962 562 354 13 53 chr13 49507301 49507605 -70776707 - B4A SINE B4 0 292 1 2 962 518 347 0 39 chr13 49507718 49507874 -70776438 + RSINE1 SINE B4 3 152 -13 2 962 449 263 175 13 chr13 49508490 49508644 -70775668 - MLT1A0 LTR MaLR -162 203 25 3 962 456 252 9 19 chr13 49508789 49508894 -70775418 - PB1D10 SINE Alu -9 108 5 3 962 233 270 67 48 chr13 49509469 49509574 -70774738 + MER97a DNA MER1_type? 61 167 -727 3 962 320 255 223 68 chr13 49510297 49510503 -70773809 + RMER15 LTR ERVL 324 561 -14 3 962 967 294 137 58 chr13 49510506 49511200 -70773112 + RMER15-int LTR ERVL 5 753 -4246 3 962 2176 296 112 49 chr13 49511222 49512124 -70772188 + RMER15-int LTR ERVL 1194 2153 -2846 3 962 499 163 203 39 chr13 49512124 49512252 -70772060 - B1_Mur4 SINE Alu 0 150 2 3 962 633 250 138 0 chr13 49512255 49512451 -70771861 - ID_B1 SINE B4 -1 223 1 3 962 2176 304 74 54 chr13 49512451 49512546 -70771766 + RMER15-int LTR ERVL 2154 2262 -2737 3 962 1224 41 0 27 chr13 49512546 49512696 -70771616 + B1_Mus2 SINE Alu 1 146 -1 3 962 1312 96 17 0 chr13 49512703 49512881 -70771431 - B2_Mm2 SINE B2 -14 181 1 3 962 2176 304 74 54 chr13 49512881 49513121 -70771191 + RMER15-int LTR ERVL 2270 2508 -2491 3 962 432 143 0 0 chr13 49513135 49513198 -70771114 + RMER15-int LTR ERVL 4147 4209 -790 3 962 4411 142 79 85 chr13 49513199 49514106 -70770206 + RMER19B LTR ERVK 1 902 0 3 962 970 258 37 15 chr13 49514106 49514378 -70769934 + RMER15-int LTR ERVL 4205 4482 -517 3 962 987 249 119 97 chr13 49514396 49514841 -70769471 + RMER15-int LTR ERVL 4537 4991 -8 3 962 450 311 15 77 chr13 49515013 49515136 -70769176 + RMER15 LTR ERVL 380 497 -78 3 962 4676 65 2 14 chr13 49515136 49515730 -70768582 - LTRIS_Mus LTR ERV1 0 587 1 3 962 450 311 15 77 chr13 49515730 49515801 -70768511 + RMER15 LTR ERVL 498 561 -14 3 962 463 202 111 0 chr13 49515917 49516016 -70768296 - PB1D9 SINE Alu -9 111 2 4 962 312 280 103 0 chr13 49519325 49519432 -70764880 - PB1 SINE Alu -9 118 1 4 962 596 250 0 8 chr13 49519453 49519578 -70764734 + B1F2 SINE Alu 26 149 0 4 962 263 324 14 0 chr13 49519621 49519692 -70764620 + ID4_ SINE ID 1 72 -11 4 962 355 313 73 65 chr13 49521383 49521615 -70762697 + ORR1D2 LTR MaLR 6 239 -131 4 962 427 231 143 11 chr13 49521678 49521850 -70762462 - B3 SINE B2 -4 191 1 4 962 225 284 42 10 chr13 49521988 49522084 -70762228 - L1ME4a LINE L1 -56 6068 5970 4 962 522 207 98 16 chr13 49523034 49523157 -70761155 - B1_Mur1 SINE Alu -16 133 1 4 962 450 214 61 54 chr13 49523157 49523304 -70761008 - B1F SINE Alu 0 149 1 4 962 542 165 93 50 chr13 49524021 49524161 -70760151 - B1_Mm SINE Alu -1 146 1 4 962 528 206 9 78 chr13 49524455 49524571 -70759741 + PB1 SINE Alu 2 109 -18 5 962 39 0 0 0 chr13 49524673 49524712 -70759600 + AT_rich Low_complexity Low_complexity 1 39 0 5 962 649 277 68 87 chr13 49524876 49525082 -70759230 - B3 SINE B2 -14 202 1 5 962 376 226 20 70 chr13 49525098 49525198 -70759114 - PB1D10 SINE Alu -8 109 15 5 962 277 200 50 0 chr13 49525217 49525277 -70759035 - PB1D10 SINE Alu -9 108 46 5 962 286 140 121 17 chr13 49525261 49525319 -70758993 + PB1D10 SINE Alu 26 89 -28 5 962 192 125 0 0 chr13 49525344 49525376 -70758936 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 5 962 367 308 33 0 chr13 49525547 49525638 -70758674 + B1F1 SINE Alu 5 98 -51 5 962 234 0 0 0 chr13 49525650 49525676 -70758636 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 962 535 257 10 32 chr13 49525679 49525853 -70758459 + B3A SINE B2 2 172 -44 5 962 497 165 0 0 chr13 49525922 49526007 -70758305 - B3 SINE B2 -131 85 1 6 962 648 233 14 7 chr13 49529282 49529429 -70754883 - B1_Mur1 SINE Alu -1 148 1 6 962 500 131 117 36 chr13 49529909 49530020 -70754292 + B1_Mus1 SINE Alu 5 124 -24 6 962 667 67 0 69 chr13 49530170 49530314 -70753998 + (GGAA)n Simple_repeat Simple_repeat 1 134 0 6 962 234 0 0 0 chr13 49532005 49532031 -70752281 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 962 353 270 68 45 chr13 49532344 49532476 -70751836 - RSINE1 SINE B4 0 165 31 6 962 327 253 25 0 chr13 49532449 49532528 -70751784 - ID SINE ID -142 82 2 6 962 480 250 132 55 chr13 49532866 49533230 -70751082 - L1M4 LINE L1 -1010 5628 5237 6 962 1456 63 21 11 chr13 49533256 49533447 -70750865 + B2_Mm2 SINE B2 2 194 -1 6 962 250 120 100 0 chr13 49533447 49533497 -70750815 - B3 SINE B2 -161 55 1 6 962 199 29 86 0 chr13 49533567 49533602 -70750710 + (TCTCCC)n Simple_repeat Simple_repeat 6 43 0 7 962 334 212 15 0 chr13 49533623 49533689 -70750623 - ID_B1 SINE B4 -6 218 152 7 962 21 36 0 0 chr13 49533863 49533891 -70750421 + AT_rich Low_complexity Low_complexity 1 28 0 7 962 227 220 20 0 chr13 49533921 49533971 -70750341 + B3 SINE B2 157 207 -9 7 962 310 221 25 38 chr13 49534119 49534199 -70750113 - RSINE1 SINE B4 0 165 87 7 962 281 319 50 25 chr13 49534240 49534359 -70749953 - B4 SINE B4 -118 174 53 7 962 361 277 89 0 chr13 49534395 49534496 -70749816 - PB1D10 SINE Alu -7 110 1 7 962 378 0 0 0 chr13 49534540 49534582 -70749730 + (TC)n Simple_repeat Simple_repeat 2 43 0 7 962 474 101 0 0 chr13 49534582 49534650 -70749662 + (TA)n Simple_repeat Simple_repeat 2 70 0 7 962 392 275 55 21 chr13 49534675 49534820 -70749492 - RSINE1 SINE B4 -14 151 2 7 962 786 283 81 68 chr13 49534950 49535345 -70748967 - L1M4 LINE L1 -5805 737 338 6 962 2123 165 60 53 chr13 49535455 49535871 -70748441 + MTD LTR MaLR 1 419 0 8 962 777 207 64 0 chr13 49535908 49536048 -70748264 + B1_Mur1 SINE Alu 1 149 0 8 962 711 231 85 16 chr13 49536117 49536306 -70748006 - B3 SINE B2 -4 212 11 8 962 207 0 0 0 chr13 49537588 49537611 -70746701 + (T)n Simple_repeat Simple_repeat 1 23 0 8 962 1258 41 0 0 chr13 49537611 49537757 -70746555 - B1_Mus1 SINE Alu 0 148 3 8 962 282 116 0 0 chr13 49539793 49539836 -70744476 + (TATG)n Simple_repeat Simple_repeat 4 46 0 8 962 580 271 16 0 chr13 49539841 49539963 -70744349 - RSINE1 SINE B4 -30 135 12 8 962 1404 58 0 6 chr13 49541027 49541043 -70743269 - B2_Mm1t SINE B2 -19 174 159 8 962 369 0 0 0 chr13 49541043 49541084 -70743228 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 8 962 1404 58 0 6 chr13 49541084 49541241 -70743071 - B2_Mm1t SINE B2 -35 158 2 8 962 1100 47 0 149 chr13 49542586 49542761 -70741551 - B1_Mur3 SINE Alu 0 149 1 8 962 6147 43 1 4 chr13 49543084 49543827 -70740485 - L1Md_F2 LINE L1 0 6582 5842 9 962 423 0 0 0 chr13 49544347 49544394 -70739918 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 963 215 301 14 0 chr13 49546265 49546325 -70737987 + CT-rich Low_complexity Low_complexity 15 75 0 9 963 948 121 43 0 chr13 49546325 49546465 -70737847 - B1_Mur4 SINE Alu -3 147 2 9 963 215 301 14 0 chr13 49546465 49546477 -70737835 + polypyrimidine Low_complexity Low_complexity 3 14 0 9 963 1022 98 104 0 chr13 49546511 49546675 -70737637 + B2_Mm1a SINE B2 5 185 -8 9 963 592 206 76 8 chr13 49546696 49546828 -70737484 - RSINE1 SINE B4 -22 143 3 9 963 252 259 60 24 chr13 49546831 49546914 -70737398 - PB1D7 SINE Alu 0 120 35 9 963 2142 95 82 3 chr13 49547201 49547506 -70736806 - ORR1A4 LTR MaLR 0 329 1 9 963 290 291 96 10 chr13 49548271 49548375 -70735937 - PB1 SINE Alu -2 125 13 9 963 537 16 0 0 chr13 49548682 49548744 -70735568 + (GGCTG)n Simple_repeat Simple_repeat 5 66 0 1 963 584 259 44 10 chr13 49548760 49548963 -70735349 - Lx9 LINE L1 -591 7053 6844 1 963 473 250 238 19 chr13 49548961 49549230 -70735082 + Lx9 LINE L1 7130 7457 -187 1 963 267 79 0 0 chr13 49549230 49549268 -70735044 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 963 2075 88 40 62 chr13 49549313 49549638 -70734674 + ORR1A3 LTR MaLR 1 318 -8 1 963 249 33 0 0 chr13 49549683 49549713 -70734599 + (TTA)n Simple_repeat Simple_repeat 2 31 0 1 963 1159 75 0 0 chr13 49549713 49549860 -70734452 - B1_Mus1 SINE Alu -1 147 1 1 963 297 0 0 0 chr13 49550582 49550615 -70733697 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 963 223 231 0 0 chr13 49550698 49550737 -70733575 - B3A SINE B2 -159 39 1 1 963 564 291 0 21 chr13 49550800 49550986 -70733326 + B3A SINE B2 1 182 -16 1 963 408 118 224 0 chr13 49551034 49551119 -70733193 - PB1D10 SINE Alu -9 108 5 1 963 314 306 165 36 chr13 49551438 49551686 -70732626 - L1MEg LINE L1 -5184 900 621 1 963 23 33 0 0 chr13 49552271 49552301 -70732011 + AT_rich Low_complexity Low_complexity 1 30 0 1 963 979 126 149 6 chr13 49552309 49552484 -70731828 + B3 SINE B2 6 205 -11 1 963 447 294 33 25 chr13 49552483 49552605 -70731707 - ID_B1 SINE B4 -17 207 85 1 963 1189 68 0 0 chr13 49552744 49552891 -70731421 + B1_Mus2 SINE Alu 1 147 0 1 963 25 0 0 0 chr13 49553274 49553299 -70731013 + AT_rich Low_complexity Low_complexity 1 25 0 1 963 251 265 0 93 chr13 49558935 49559010 -70725302 - ID SINE ID -135 89 22 1 963 301 253 165 0 chr13 49559030 49559121 -70725191 - PB1D10 SINE Alu -1 116 11 1 963 337 230 47 65 chr13 49563769 49563876 -70720436 - L1MB7 LINE L1 -193 5991 5887 1 963 710 116 208 32 chr13 49563905 49564030 -70720282 - B1_Mur3 SINE Alu -2 147 1 1 963 577 195 24 24 chr13 49564036 49564162 -70720150 - B1_Mur1 SINE Alu -5 144 19 1 963 640 255 37 37 chr13 49564161 49564330 -70719982 - B3A SINE B2 0 198 28 1 963 395 264 54 54 chr13 49564335 49564447 -70719865 - B4A SINE B4 -86 206 95 1 963 224 271 55 41 chr13 49564387 49564460 -70719852 - B1_Mur4 SINE Alu -76 74 1 1 963 742 221 25 55 chr13 49564459 49564622 -70719690 - B3 SINE B2 -2 214 57 1 963 1066 83 8 8 chr13 49564682 49564816 -70719496 + B1_Mur3 SINE Alu 5 138 -11 1 963 299 301 85 16 chr13 49564829 49565018 -70719294 + L1M4 LINE L1 4941 5142 -1004 1 963 314 267 88 79 chr13 49565149 49565263 -70719049 + PB1D10 SINE Alu 1 115 -2 1 963 4107 159 132 14 chr13 49565338 49566143 -70718169 + RMER19B LTR ERVK 3 902 0 1 963 845 133 23 0 chr13 49569167 49569295 -70715017 - B1_Mur3 SINE Alu -7 142 12 1 963 456 230 0 110 chr13 49569205 49569332 -70714980 - MT2B LTR ERVL -344 257 145 1 963 505 261 176 0 chr13 49569531 49569650 -70714662 + B3 SINE B2 43 182 -34 1 963 1710 176 32 86 chr13 49569653 49570001 -70714311 + ORR1A4 LTR MaLR 1 329 0 1 963 12108 123 43 62 chr13 49570001 49571155 -70713157 + ORR1A4-int LTR MaLR 1 1166 -797 1 963 1440 66 44 0 chr13 49571155 49571338 -70712974 + B2_Mm2 SINE B2 2 192 -3 1 963 12108 123 43 62 chr13 49571338 49572183 -70712129 + ORR1A4-int LTR MaLR 1167 1963 0 1 963 1951 139 0 71 chr13 49572183 49572523 -70711789 + ORR1A4 LTR MaLR 1 316 -13 1 963 23 33 0 0 chr13 49572542 49572572 -70711740 + AT_rich Low_complexity Low_complexity 1 30 0 1 963 960 224 102 0 chr13 49572577 49572773 -70711539 + B3 SINE B2 1 216 0 1 963 228 214 170 20 chr13 49573611 49573711 -70710601 - L1MC3 LINE L1 -98 7687 7573 1 963 213 220 0 0 chr13 49573969 49574019 -70710293 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 963 306 271 122 20 chr13 49574679 49574826 -70709486 + L1ME3A LINE L1 6001 6162 -11 1 963 22 0 0 0 chr13 49575418 49575440 -70708872 + AT_rich Low_complexity Low_complexity 1 22 0 1 963 21 0 0 0 chr13 49575718 49575739 -70708573 + AT_rich Low_complexity Low_complexity 1 21 0 1 963 546 221 106 0 chr13 49576311 49576424 -70707888 + B1F1 SINE Alu 3 127 -22 1 963 457 261 27 0 chr13 49576522 49576633 -70707679 - PB1D9 SINE Alu -6 114 1 1 963 198 71 0 0 chr13 49577386 49577414 -70706898 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 1 963 764 177 0 23 chr13 49577414 49577547 -70706765 - B1_Mur4 SINE Alu -20 130 1 1 963 495 289 98 118 chr13 49577556 49577777 -70706535 - L1MB5 LINE L1 -15 6159 5964 1 963 780 206 15 0 chr13 49577777 49577913 -70706399 - B1_Mur2 SINE Alu -10 139 2 1 963 495 289 98 118 chr13 49577913 49578091 -70706221 - L1MB5 LINE L1 -211 5963 5768 1 963 801 114 0 0 chr13 49578228 49578360 -70705952 + (TA)n Simple_repeat Simple_repeat 2 133 0 1 963 234 0 0 0 chr13 49578905 49578931 -70705381 + (T)n Simple_repeat Simple_repeat 1 26 0 1 963 570 249 169 28 chr13 49579415 49579709 -70704603 + L1ME2 LINE L1 5604 5937 -241 1 963 1183 79 128 0 chr13 49579886 49580050 -70704262 + B2_Mm1t SINE B2 1 185 -8 1 963 313 332 95 76 chr13 49580373 49580637 -70703675 + B4A SINE B4 2 270 -22 1 963 204 40 0 0 chr13 49581262 49581287 -70703025 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 1 963 537 219 53 0 chr13 49581334 49581448 -70702864 + PB1D9 SINE Alu 1 120 0 1 963 2011 119 34 30 chr13 49581544 49581872 -70702440 + ORR1A4 LTR MaLR 1 329 0 1 963 402 248 119 8 chr13 49582807 49582941 -70701371 - L1M4c LINE L1 -5016 1368 1220 1 963 464 289 30 35 chr13 49582961 49583162 -70701150 - L1M4c LINE L1 -5629 755 556 1 963 1168 259 52 11 chr13 49583382 49583651 -70700661 - B4A SINE B4 -8 284 5 1 963 234 264 222 8 chr13 49583655 49583781 -70700531 - L1M4c LINE L1 -5818 566 414 1 963 1633 161 75 11 chr13 49583806 49584088 -70700224 + MTC LTR MaLR 114 413 -8 1 963 1278 208 154 3 chr13 49584108 49584407 -70699905 - L1M4c LINE L1 -5996 388 45 1 963 1198 70 140 0 chr13 49584412 49584583 -70699729 - B2_Mm2 SINE B2 0 195 1 1 963 369 0 0 0 chr13 49585142 49585183 -70699129 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 963 916 164 7 28 chr13 49585183 49585327 -70698985 - B1_Mur4 SINE Alu -9 141 1 1 963 227 311 14 0 chr13 49585794 49585868 -70698444 - ID4_ SINE ID 0 83 9 1 963 2811 223 118 16 chr13 49586189 49586540 -70697772 - Lx8 LINE L1 -459 7014 6629 1 963 3066 81 15 8 chr13 49586540 49586937 -70697375 - MTB LTR MaLR 0 400 1 1 963 2811 223 118 16 chr13 49586937 49587287 -70697025 - Lx8 LINE L1 -845 6628 6241 1 963 221 218 0 68 chr13 49587293 49587352 -70696960 + BC1_Mm scRNA scRNA 32 86 -66 1 963 739 224 39 39 chr13 49587489 49587670 -70696642 + B3A SINE B2 2 182 -16 1 963 760 224 7 13 chr13 49588795 49588944 -70695368 - B1_Mur2 SINE Alu -1 148 1 1 963 22 0 0 0 chr13 49590722 49590744 -70693568 + AT_rich Low_complexity Low_complexity 1 22 0 1 963 26 30 0 0 chr13 49591737 49591770 -70692542 + AT_rich Low_complexity Low_complexity 1 33 0 1 963 282 254 48 0 chr13 49591794 49591857 -70692455 + ID_B1 SINE B4 159 224 0 1 963 207 156 0 0 chr13 49591857 49591889 -70692423 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1 963 207 176 0 0 chr13 49591945 49591979 -70692333 + A-rich Low_complexity Low_complexity 4 37 0 1 963 462 219 42 90 chr13 49592187 49592286 -70692026 - L1M3 LINE L1 -1492 4648 4554 1 963 4978 37 34 3 chr13 49592286 49592875 -70691437 - L1Md_F2 LINE L1 0 6582 5983 1 963 462 219 42 90 chr13 49592875 49592940 -70691372 - L1M3 LINE L1 -1587 4553 4492 1 963 245 170 85 0 chr13 49592947 49592994 -70691318 - L1_Rod LINE L1 -1573 4274 4224 1 963 3743 216 52 32 chr13 49592975 49593287 -70691025 + Lx9 LINE L1 5791 6341 -1303 1 963 4752 12 0 0 chr13 49593287 49593780 -70690532 + MT2_Mm LTR ERVL 1 493 0 1 963 3743 226 101 30 chr13 49593780 49594644 -70689668 + Lx9 LINE L1 6342 7227 -417 1 963 2669 133 221 7 chr13 49594646 49594843 -70689469 - RMER6C LTR ERVK -2 688 440 1 963 231 133 0 0 chr13 49594843 49594888 -70689424 + (AACTG)n Simple_repeat Simple_repeat 1 45 0 1 963 2669 133 221 7 chr13 49594888 49595257 -70689055 - RMER6C LTR ERVK -251 439 1 1 963 578 229 0 71 chr13 49595257 49595398 -70688914 + Lx9 LINE L1 7222 7352 -292 1 963 221 271 0 17 chr13 49595401 49595461 -70688851 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 963 419 287 155 25 chr13 49595462 49595596 -70688716 + HAL1-3A_ME LINE L1 1977 2133 -725 1 963 315 0 0 0 chr13 49595596 49595631 -70688681 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 1 963 419 287 155 25 chr13 49595631 49595696 -70688616 + HAL1-3A_ME LINE L1 2134 2202 -656 1 963 222 37 0 0 chr13 49596081 49596108 -70688204 + (CAA)n Simple_repeat Simple_repeat 3 29 0 1 963 1960 254 56 112 chr13 49596210 49597315 -70686997 - MTD-int LTR MaLR -4 1094 1 1 963 1412 249 100 8 chr13 49597316 49597696 -70686616 - MTD LTR MaLR 0 419 5 1 963 821 226 51 11 chr13 49598055 49598230 -70686082 + B3 SINE B2 5 186 -30 1 963 297 0 0 0 chr13 49598230 49598263 -70686049 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 963 291 28 0 0 chr13 49598459 49598495 -70685817 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 963 357 24 0 0 chr13 49599505 49599547 -70684765 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 963 571 233 0 41 chr13 49599559 49599680 -70684632 + B1_Mur1 SINE Alu 3 118 -31 1 963 314 270 41 131 chr13 49599680 49599698 -70684614 + MT2B LTR ERVL 182 286 -315 1 963 442 200 109 10 chr13 49599715 49599816 -70684496 - PB1D10 SINE Alu -6 111 1 1 963 307 280 123 89 chr13 49601983 49602258 -70682054 + L1MEg LINE L1 1034 1307 -4777 1 963 622 275 14 0 chr13 49602258 49602396 -70681916 + B1F2 SINE Alu 1 140 -9 1 963 307 280 123 89 chr13 49602396 49602445 -70681867 + L1MEg LINE L1 1308 1368 -4716 1 963 440 331 158 28 chr13 49602878 49603276 -70681036 + L1MEg LINE L1 575 1024 -5218 1 963 213 65 0 0 chr13 49603465 49603496 -70680816 + (CAAAAA)n Simple_repeat Simple_repeat 3 33 0 1 963 326 244 53 129 chr13 49603501 49603633 -70680679 + B4A SINE B4 73 194 -98 1 963 830 119 8 31 chr13 49603537 49603667 -70680645 + B1_Mur4 SINE Alu 11 137 -13 1 963 592 246 8 0 chr13 49603867 49603993 -70680319 + ID_B1 SINE B4 87 213 -11 1 963 288 0 0 0 chr13 49603993 49604025 -70680287 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 963 274 280 83 52 chr13 49604078 49604270 -70680042 + L1MEg LINE L1 1524 1721 -4445 1 963 430 223 149 0 chr13 49604307 49604401 -70679911 + MER20 DNA MER1_type 38 145 -74 1 963 526 272 31 62 chr13 49604530 49604691 -70679621 - RSINE1 SINE B4 -6 159 4 2 963 301 310 169 6 chr13 49604848 49605123 -70679189 + L1MEg LINE L1 2148 2476 -3670 1 963 21 0 0 0 chr13 49605210 49605231 -70679081 + AT_rich Low_complexity Low_complexity 1 21 0 2 963 1227 58 0 0 chr13 49605244 49605382 -70678930 + B1_Mus1 SINE Alu 2 139 -9 2 963 189 94 0 0 chr13 49605392 49605424 -70678888 + (A)n Simple_repeat Simple_repeat 1 32 0 2 963 324 296 8 87 chr13 49605469 49605595 -70678717 + PB1D10 SINE Alu 1 116 -1 2 963 16952 53 0 1 chr13 49606367 49608432 -70675880 - L1_Mm LINE L1 -72 5811 3748 2 963 682 343 65 14 chr13 49609104 49609379 -70674933 + B4 SINE B4 1 289 -3 2 963 247 250 78 0 chr13 49609424 49609488 -70674824 + RSINE1 SINE B4 1 69 -96 2 963 301 288 261 46 chr13 49609487 49609640 -70674672 + B4A SINE B4 103 288 -4 2 963 456 311 81 0 chr13 49609842 49609990 -70674322 + MER58B DNA MER1_type 182 341 0 2 963 1118 82 13 33 chr13 49610758 49610910 -70673402 - B1_Mur3 SINE Alu 0 149 1 2 963 351 291 25 0 chr13 49611428 49611507 -70672805 - RSINE1 SINE B4 -2 163 83 2 963 23 0 0 0 chr13 49611556 49611579 -70672733 + AT_rich Low_complexity Low_complexity 1 23 0 2 963 940 289 10 0 chr13 49611583 49611787 -70672525 + B3 SINE B2 1 206 -10 2 963 298 252 89 33 chr13 49612035 49612148 -70672164 - PB1 SINE Alu -2 125 12 2 963 873 106 38 0 chr13 49612357 49612489 -70671823 - B1_Mus1 SINE Alu -8 140 4 2 963 428 278 34 20 chr13 49612496 49612643 -70671669 - RSINE1 SINE B4 -14 151 3 2 963 509 173 9 109 chr13 49613508 49613618 -70670694 + PB1D9 SINE Alu 8 106 -14 2 963 245 29 29 0 chr13 49613618 49613652 -70670660 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 2 963 297 0 0 0 chr13 49614650 49614683 -70669629 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 2 963 1211 52 0 6 chr13 49614686 49614842 -70669470 - B2_Mm2 SINE B2 -39 156 2 2 963 526 185 119 75 chr13 49614851 49614985 -70669327 - B1_Mur1 SINE Alu -8 141 2 2 963 288 231 0 0 chr13 49616184 49616262 -70668050 + GA-rich Low_complexity Low_complexity 1 78 0 2 963 384 250 118 22 chr13 49616605 49616740 -70667572 - L1ME1 LINE L1 -6 6173 6026 2 963 235 265 36 0 chr13 49616955 49617038 -70667274 - L1ME1 LINE L1 -440 5739 5654 2 963 183 129 0 0 chr13 49618086 49618117 -70666195 + (TATATG)n Simple_repeat Simple_repeat 6 36 0 2 963 31 44 0 0 chr13 49619351 49619396 -70664916 + AT_rich Low_complexity Low_complexity 1 45 0 2 963 796 284 58 21 chr13 49619912 49619946 -70664366 - B4A SINE B4 -38 254 220 2 963 240 59 0 0 chr13 49619946 49619980 -70664332 + (TTG)n Simple_repeat Simple_repeat 2 35 0 2 963 796 284 58 21 chr13 49619980 49620186 -70664126 - B4A SINE B4 -73 219 5 2 963 2112 234 43 5 chr13 49620204 49620715 -70663597 - Lx6 LINE L1 -26 7434 6556 2 963 198 0 0 0 chr13 49620733 49620755 -70663557 + (T)n Simple_repeat Simple_repeat 1 22 0 2 963 1200 93 47 0 chr13 49620945 49621117 -70663195 - B2_Mm2 SINE B2 -14 181 2 2 963 413 216 53 0 chr13 49622167 49622271 -70662041 - PB1D10 SINE Alu 0 117 7 2 963 196 146 122 0 chr13 49622410 49622451 -70661861 - L3 LINE CR1 -3317 1172 1127 2 963 233 43 43 0 chr13 49622793 49622840 -70661472 - L1Md_A LINE L1 0 6582 6534 2 963 290 203 145 0 chr13 49622856 49622925 -70661387 - ID4 SINE ID -3 80 2 2 963 535 218 40 0 chr13 49623163 49623264 -70661048 - PB1D10 SINE Alu -6 111 7 2 963 421 333 60 26 chr13 49623377 49623528 -70660784 - RSINE1 SINE B4 -8 157 2 2 963 378 0 0 0 chr13 49623558 49623600 -70660712 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 963 484 303 8 24 chr13 49623727 49623852 -70660460 - ID_B1 SINE B4 -57 167 45 2 963 23 0 0 0 chr13 49625944 49625967 -70658345 + AT_rich Low_complexity Low_complexity 1 23 0 2 963 371 314 96 8 chr13 49626400 49626525 -70657787 - B1F SINE Alu -8 141 6 2 963 1145 69 7 0 chr13 49626837 49626982 -70657330 - B1_Mus1 SINE Alu -1 147 2 2 963 658 255 0 60 chr13 49627032 49627232 -70657080 - B3A SINE B2 -10 188 1 2 963 317 238 144 45 chr13 49627244 49627376 -70656936 + L1MC4a LINE L1 7729 7873 -9 2 963 738 199 21 0 chr13 49627434 49627575 -70656737 + B1_Mur2 SINE Alu 1 144 -5 2 963 486 163 0 0 chr13 49627784 49627882 -70656430 + (TCTA)n Simple_repeat Simple_repeat 4 101 0 2 963 253 247 299 0 chr13 49627892 49627969 -70656343 - PB1D9 SINE Alu -10 110 11 2 963 24 32 0 0 chr13 49627980 49628011 -70656301 + AT_rich Low_complexity Low_complexity 1 31 0 2 963 936 231 5 20 chr13 49628101 49628300 -70656012 - MTE2b LTR MaLR -3 376 181 2 963 473 252 9 19 chr13 49628392 49628497 -70655815 - PB1D7 SINE Alu -6 114 11 2 963 559 264 70 21 chr13 49630115 49630301 -70654011 - B3A SINE B2 -2 196 2 2 963 4945 61 25 0 chr13 49630768 49631407 -70652905 + L1_Mus2 LINE L1 5911 6565 -1 2 963 22 0 0 0 chr13 49631416 49631438 -70652874 + AT_rich Low_complexity Low_complexity 1 22 0 2 963 5467 89 19 10 chr13 49631488 49632274 -70652038 + Lx LINE L1 5860 6652 -2 2 963 32 0 0 0 chr13 49632276 49632308 -70652004 + AT_rich Low_complexity Low_complexity 1 32 0 2 963 766 238 111 26 chr13 49632842 49633032 -70651280 + B3 SINE B2 11 216 0 2 963 180 0 0 0 chr13 49633055 49633075 -70651237 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2 963 695 299 5 5 chr13 49633082 49633274 -70651038 + B3A SINE B2 3 194 -4 2 963 212 355 31 82 chr13 49633274 49633372 -70650940 + B4A SINE B4 74 166 -126 2 963 468 302 8 37 chr13 49633298 49633427 -70650885 + B1F SINE Alu 7 128 -19 2 963 662 255 211 32 chr13 49634625 49634872 -70649440 + B4 SINE B4 2 292 0 2 963 841 229 66 47 chr13 49634961 49635172 -70649140 + B3 SINE B2 2 216 0 2 963 21 0 0 0 chr13 49635282 49635303 -70649009 + AT_rich Low_complexity Low_complexity 1 21 0 2 963 21 0 0 0 chr13 49635583 49635604 -70648708 + AT_rich Low_complexity Low_complexity 1 21 0 2 963 984 109 102 17 chr13 49635613 49635790 -70648522 + L1Md_F2 LINE L1 6391 6582 0 2 963 1250 72 27 22 chr13 49635798 49635982 -70648330 - B2_Mm1t SINE B2 -7 186 2 2 963 1353 260 27 49 chr13 49636316 49636684 -70647628 - ORR1D2 LTR MaLR -8 362 3 2 963 573 164 29 0 chr13 49637296 49637400 -70646912 - PB1D9 SINE Alu 0 120 14 2 963 288 0 0 0 chr13 49637568 49637600 -70646712 + (CAGG)n Simple_repeat Simple_repeat 3 34 0 2 963 28 29 0 0 chr13 49637819 49637854 -70646458 + AT_rich Low_complexity Low_complexity 1 35 0 2 963 267 298 96 9 chr13 49638308 49638423 -70645889 + L1ME3B LINE L1 5777 5901 -339 2 963 26 0 0 0 chr13 49638637 49638663 -70645649 + AT_rich Low_complexity Low_complexity 1 26 0 2 963 27 73 0 0 chr13 49640717 49640772 -70643540 + AT_rich Low_complexity Low_complexity 1 55 0 2 963 552 205 0 0 chr13 49640992 49641148 -70643164 + GA-rich Low_complexity Low_complexity 1 156 0 2 963 189 0 0 0 chr13 49641151 49641172 -70643140 + (ACTG)n Simple_repeat Simple_repeat 4 24 0 2 963 291 273 113 53 chr13 49643341 49643492 -70640820 + Tigger16b DNA Tigger 44 203 -134 2 963 773 146 7 44 chr13 49643621 49643757 -70640555 + B1_Mur3 SINE Alu 2 132 -17 2 963 612 191 159 0 chr13 49643861 49643987 -70640325 + B1F2 SINE Alu 3 148 -1 2 963 206 127 14 87 chr13 49644001 49644070 -70640242 + A-rich Low_complexity Low_complexity 1 64 0 2 963 811 258 51 5 chr13 49644228 49644442 -70639870 + ID_B1 SINE B4 1 224 0 2 963 608 269 14 7 chr13 49644593 49644735 -70639577 + B1F2 SINE Alu 1 143 -6 2 963 223 268 0 0 chr13 49645014 49645070 -70639242 - B4A SINE B4 -235 57 2 2 963 354 255 46 64 chr13 49645422 49645531 -70638781 + PB1D10 SINE Alu 9 115 -2 2 963 450 0 0 0 chr13 49645650 49645700 -70638612 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 963 23 33 0 0 chr13 49646001 49646031 -70638281 + AT_rich Low_complexity Low_complexity 1 30 0 2 963 202 203 40 13 chr13 49646047 49646085 -70638227 + A-rich Low_complexity Low_complexity 5 43 0 2 963 754 251 72 10 chr13 49646085 49646294 -70638018 + ID_B1 SINE B4 3 224 0 2 963 202 203 40 13 chr13 49646294 49646330 -70637982 + A-rich Low_complexity Low_complexity 44 81 0 2 963 300 284 88 126 chr13 49647978 49648269 -70636043 - MTEa LTR MaLR -12 367 88 2 963 271 169 57 57 chr13 49648357 49648445 -70635867 + Lx9 LINE L1 7552 7639 -5 2 963 371 280 64 57 chr13 49648727 49648759 -70635553 - B1_Mm SINE Alu -6 141 112 2 963 189 74 0 0 chr13 49648759 49648786 -70635526 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 2 963 458 280 0 0 chr13 49648786 49648893 -70635419 - PB1D9 SINE Alu -13 107 1 2 963 337 356 61 0 chr13 49648791 49648906 -70635406 - B4 SINE B4 -101 191 70 2 963 494 174 162 10 chr13 49649685 49649784 -70634528 + PB1D9 SINE Alu 7 120 0 2 963 261 324 75 22 chr13 49651004 49651178 -70633134 + MIR SINE MIR 17 209 -59 2 963 481 242 20 18 chr13 49651280 49651399 -70632913 - PB1 SINE Alu 0 120 9 2 963 891 186 131 0 chr13 49652382 49652581 -70631731 - URR1B DNA MER1_type 0 225 1 2 963 23 33 0 0 chr13 49653084 49653114 -70631198 + AT_rich Low_complexity Low_complexity 1 30 0 2 963 25 65 0 0 chr13 49653377 49653423 -70630889 + AT_rich Low_complexity Low_complexity 1 46 0 2 963 842 244 77 0 chr13 49653429 49653501 -70630811 + B4 SINE B4 2 86 -206 3 963 298 276 96 87 chr13 49653501 49653616 -70630696 + PB1D10 SINE Alu 2 117 0 3 963 260 338 0 0 chr13 49653716 49653790 -70630522 + B4 SINE B4 218 291 -1 3 963 186 270 58 75 chr13 49653910 49654030 -70630282 + L3 LINE CR1 2289 2406 -2083 3 963 185 257 56 14 chr13 49654793 49654864 -70629448 + MIR SINE MIR 162 235 -27 3 963 482 219 2 31 chr13 49655173 49655283 -70629029 + B3 SINE B2 1 108 -90 3 963 1920 79 7 7 chr13 49655342 49655611 -70628701 + MTB_Mm LTR MaLR 1 269 -138 3 963 673 221 58 0 chr13 49655611 49655765 -70628547 + Lx6 LINE L1 7278 7440 -20 3 963 630 39 0 0 chr13 49655767 49655844 -70628468 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 963 35 0 0 0 chr13 49655995 49656030 -70628282 + AT_rich Low_complexity Low_complexity 1 35 0 3 963 340 294 9 18 chr13 49656793 49656904 -70627408 + Lx9 LINE L1 7060 7169 -475 3 963 714 181 8 0 chr13 49658083 49658210 -70626102 - B3 SINE B2 -86 130 3 3 963 362 306 19 0 chr13 49658254 49658362 -70625950 - PB1D10 SINE Alu -3 114 5 3 963 982 237 116 29 chr13 49659700 49660044 -70624268 - ORR1D1 LTR MaLR 0 374 1 3 963 497 301 22 29 chr13 49660400 49660537 -70623775 - B1F1 SINE Alu -9 140 5 3 963 245 288 134 50 chr13 49661224 49661425 -70622887 + RLTR25A LTR ERVK 365 582 -521 3 963 850 143 14 41 chr13 49661319 49661465 -70622847 + B1_Mur3 SINE Alu 7 148 -1 3 963 310 284 34 76 chr13 49661529 49661647 -70622665 + PB1D10 SINE Alu 3 115 -2 3 963 452 101 29 0 chr13 49662998 49663067 -70621245 - ORR1B1 LTR MaLR 0 394 324 3 963 2205 19 60 0 chr13 49663149 49663415 -70620897 - L1Md_A LINE L1 0 6582 6301 3 963 1452 53 37 0 chr13 49663619 49663807 -70620505 - B2_Mm2 SINE B2 0 195 1 3 963 704 277 10 20 chr13 49663970 49664169 -70620143 - B3A SINE B2 0 198 2 3 963 1544 16 49 0 chr13 49664440 49664623 -70619689 + B2_Mm1a SINE B2 1 192 -1 3 963 330 297 104 95 chr13 49665120 49665194 -70619118 - L1ME2z LINE L1 -36 6142 6083 3 963 1331 71 38 21 chr13 49665194 49665380 -70618932 - B2_Mm2 SINE B2 -6 189 1 3 963 382 302 153 43 chr13 49665380 49665729 -70618583 - L1ME2z LINE L1 -96 6082 5681 3 963 2514 191 20 22 chr13 49665733 49666230 -70618082 + RLTR12B LTR ERVK 2 497 -31 3 963 223 254 0 33 chr13 49666489 49666550 -70617762 - ID4 SINE ID -24 59 1 3 963 309 238 12 36 chr13 49666557 49666640 -70617672 - B1F SINE Alu -3 146 66 3 963 265 232 42 78 chr13 49667259 49667341 -70616971 - PB1 SINE Alu -43 84 24 3 963 228 292 42 0 chr13 49667448 49667520 -70616792 - ID4 SINE ID -5 78 4 3 963 576 315 51 2 chr13 49667546 49667865 -70616447 - L1ME2z LINE L1 -653 5691 5338 3 963 614 289 21 4 chr13 49668007 49668192 -70616120 - B3 SINE B2 0 216 28 3 963 23 54 0 0 chr13 49668193 49668230 -70616082 + AT_rich Low_complexity Low_complexity 1 37 0 3 963 4022 203 92 81 chr13 49668342 49668399 -70615913 + L1_Mur3 LINE L1 2900 2955 -2925 3 963 1382 95 0 5 chr13 49668399 49668589 -70615723 - B2_Mm2 SINE B2 -6 189 1 3 963 4022 203 92 81 chr13 49668589 49668829 -70615483 + L1_Mur3 LINE L1 2956 3232 -2648 3 963 1500 47 0 30 chr13 49668829 49669026 -70615286 + B2_Mm1t SINE B2 2 192 -1 3 963 4022 203 92 81 chr13 49669026 49669086 -70615226 + L1_Mur3 LINE L1 3233 3274 -2606 3 963 1349 50 6 0 chr13 49669086 49669266 -70615046 + L1Md_F2 LINE L1 6402 6582 0 3 963 4022 203 92 81 chr13 49669266 49670355 -70613957 + L1_Mur3 LINE L1 3275 4365 -1515 3 963 1077 128 55 16 chr13 49670466 49670575 -70613737 + B2_Mm2 SINE B2 1 116 -79 3 963 1385 17 28 0 chr13 49670575 49670752 -70613560 - L1Md_F2 LINE L1 0 6582 6401 3 963 1077 128 55 16 chr13 49670752 49670825 -70613487 + B2_Mm2 SINE B2 117 190 -5 3 963 735 206 35 21 chr13 49670839 49670983 -70613329 + B1_Mur3 SINE Alu 2 147 -2 3 963 224 59 0 29 chr13 49670983 49671018 -70613294 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 3 963 408 267 167 61 chr13 49671062 49671325 -70612987 - B4A SINE B4 -1 291 1 3 963 253 231 54 21 chr13 49671489 49671582 -70612730 - L1MC5 LINE L1 -514 7447 7352 3 963 1210 41 0 14 chr13 49671659 49671807 -70612505 - B1_Mus2 SINE Alu 0 147 2 3 963 372 245 10 21 chr13 49672204 49672300 -70612012 + ID_B1 SINE B4 116 210 -14 3 963 2571 143 68 28 chr13 49672824 49673443 -70610869 - RLTR31B_Mm LTR ERVK 0 557 1 3 963 612 268 92 65 chr13 49673827 49674163 -70610149 + Lx8 LINE L1 7129 7473 0 3 963 331 297 33 25 chr13 49674800 49674921 -70609391 + PB1 SINE Alu 3 124 -3 3 963 2175 136 50 11 chr13 49675011 49675389 -70608923 - ORR1B1 LTR MaLR 0 394 2 3 963 268 132 0 54 chr13 49675558 49675614 -70608698 - L1MC1 LINE L1 -14 6319 6267 3 963 1081 280 50 21 chr13 49675663 49676100 -70608212 - L1MC3 LINE L1 -961 6824 6375 3 964 581 218 113 0 chr13 49676587 49676720 -70607592 - B1_Mus1 SINE Alu 0 148 1 3 964 23 33 0 0 chr13 49676819 49676849 -70607463 + AT_rich Low_complexity Low_complexity 1 30 0 3 964 554 41 14 0 chr13 49678693 49678766 -70605546 + (TATG)n Simple_repeat Simple_repeat 2 75 0 3 964 873 133 28 7 chr13 49680795 49680939 -70603373 + B1_Mus2 SINE Alu 1 147 0 3 964 1063 109 73 0 chr13 49680940 49681105 -70603207 + B2_Mm1t SINE B2 3 179 -14 3 964 298 170 0 0 chr13 49681159 49681212 -70603100 + B2_Mm2 SINE B2 49 101 -94 3 964 207 0 0 0 chr13 49681228 49681251 -70603061 + (CATA)n Simple_repeat Simple_repeat 4 26 0 3 964 266 325 205 24 chr13 49681497 49681878 -70602434 - L2 LINE L2 -2068 1351 902 3 964 299 261 111 14 chr13 49681934 49682078 -70602234 - MER105 DNA DNA -43 161 4 3 964 1796 83 16 8 chr13 49682129 49682385 -70601927 - Lx3_Mus LINE L1 0 7009 6752 3 964 362 143 264 45 chr13 49682432 49682542 -70601770 + PB1 SINE Alu 16 149 0 3 964 595 253 185 70 chr13 49682648 49682907 -70601405 + B4 SINE B4 1 289 -3 3 964 1613 21 5 0 chr13 49682986 49683175 -70601137 - B2_Mm1a SINE B2 -2 191 2 3 964 267 54 0 0 chr13 49683179 49683216 -70601096 + (T)n Simple_repeat Simple_repeat 1 37 0 3 964 211 297 156 0 chr13 49683233 49683297 -70601015 - PB1 SINE Alu -39 88 15 3 964 335 230 88 44 chr13 49683584 49683675 -70600637 + PB1D10 SINE Alu 1 95 -22 3 964 224 330 115 9 chr13 49683675 49683695 -70600617 + B4A SINE B4 86 208 -84 3 964 333 244 25 34 chr13 49683698 49683817 -70600495 + GA-rich Low_complexity Low_complexity 2 119 0 3 964 480 297 36 0 chr13 49684295 49684433 -70599879 + B1F2 SINE Alu 7 149 0 3 964 1167 55 0 7 chr13 49684496 49684643 -70599669 - B1_Mus2 SINE Alu 0 147 2 3 964 441 189 0 131 chr13 49685854 49685976 -70598336 - B1_Mur4 SINE Alu -10 140 35 3 964 8147 45 3 2 chr13 49686265 49687260 -70597052 - L1Md_F2 LINE L1 0 6582 5587 3 964 313 221 13 117 chr13 49688033 49688110 -70596202 + RSINE1 SINE B4 3 71 -94 3 964 728 89 29 15 chr13 49688377 49688513 -70595799 + (TCTCC)n Simple_repeat Simple_repeat 5 142 0 3 964 616 210 71 16 chr13 49688513 49688639 -70595673 - B1_Mur3 SINE Alu -5 144 12 3 964 276 30 0 0 chr13 49689333 49689366 -70594946 + (A)n Simple_repeat Simple_repeat 1 33 0 3 964 35627 70 7 5 chr13 49689550 49695479 -70588833 - L1Md_F2 LINE L1 -3 6579 414 3 964 610 274 154 3 chr13 49695536 49695822 -70588490 + L1M4 LINE L1 5406 5734 -450 3 964 522 196 69 76 chr13 49695829 49695973 -70588339 + ID_B1 SINE B4 82 224 0 3 964 211 67 43 22 chr13 49695973 49696019 -70588293 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 964 976 96 60 33 chr13 49696173 49696356 -70587956 + Lx3_Mus LINE L1 6822 7009 0 3 964 1186 114 23 0 chr13 49696381 49696556 -70587756 + B2_Mm1t SINE B2 1 179 -14 3 964 325 73 319 62 chr13 49696587 49696700 -70587612 + B2_Mm2 SINE B2 47 188 -7 3 964 1032 156 0 0 chr13 49697573 49697753 -70586559 + (TA)n Simple_repeat Simple_repeat 1 180 0 3 964 3279 146 80 38 chr13 49697753 49698719 -70585593 + RLTR13D1 LTR ERVK 1 1002 -21 3 964 546 57 0 0 chr13 49698733 49698803 -70585509 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 964 204 357 0 0 chr13 49699169 49699225 -70585087 - MIR3 SINE MIR -142 66 11 3 964 595 304 11 33 chr13 49699710 49699890 -70584422 - B3 SINE B2 -37 179 4 3 964 796 144 176 0 chr13 49700025 49700178 -70584134 - B2_Mm2 SINE B2 -14 181 2 3 964 479 254 8 25 chr13 49700181 49700242 -70584070 - PB1D9 SINE Alu 0 120 62 3 964 185 0 40 0 chr13 49700242 49700267 -70584045 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 964 479 254 8 25 chr13 49700267 49700326 -70583986 - PB1D9 SINE Alu -59 61 3 3 964 424 306 58 12 chr13 49700326 49700495 -70583817 + MER20 DNA MER1_type 42 218 -1 3 964 914 246 30 0 chr13 49700542 49700741 -70583571 + B3 SINE B2 1 205 -11 3 964 512 263 8 34 chr13 49700761 49700879 -70583433 - ID_B1 SINE B4 -105 119 5 3 964 2862 59 196 27 chr13 49701051 49701489 -70582823 - RLTR1B LTR ERV1 0 512 1 3 964 343 182 45 0 chr13 49701929 49701995 -70582317 - B3 SINE B2 -147 69 1 3 964 349 281 61 0 chr13 49702106 49702188 -70582124 - PB1D10 SINE Alu -12 105 19 3 964 678 200 100 0 chr13 49702263 49702393 -70581919 - B1_Mur1 SINE Alu -2 147 5 3 964 830 161 8 0 chr13 49702539 49702669 -70581643 + B1_Mus1 SINE Alu 1 131 -17 3 964 234 91 0 0 chr13 49702722 49702755 -70581557 + (CAA)n Simple_repeat Simple_repeat 2 34 0 3 964 22 56 0 0 chr13 49702797 49702833 -70581479 + AT_rich Low_complexity Low_complexity 1 36 0 3 964 1165 55 7 0 chr13 49702878 49703023 -70581289 + B1_Mus2 SINE Alu 2 147 0 4 964 231 103 0 0 chr13 49703024 49703063 -70581249 + (A)n Simple_repeat Simple_repeat 1 39 0 4 964 387 0 0 0 chr13 49705288 49705331 -70578981 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 964 323 89 18 0 chr13 49706493 49706549 -70577763 + (CATA)n Simple_repeat Simple_repeat 4 60 0 4 964 449 244 125 37 chr13 49707052 49707188 -70577124 + B1_Mur2 SINE Alu 1 148 -1 4 964 376 342 143 27 chr13 49707568 49708051 -70576261 + L1M5 LINE L1 4485 5023 -1123 4 964 404 293 47 79 chr13 49708479 49708637 -70575675 + L1MC LINE L1 5318 5472 -2410 4 964 730 209 213 11 chr13 49708637 49708811 -70575501 + B3 SINE B2 2 210 -6 4 964 404 293 47 79 chr13 49708811 49708867 -70575445 + L1MC LINE L1 5473 5525 -2357 4 964 922 167 0 0 chr13 49708895 49709033 -70575279 - B1_Mus2 SINE Alu -9 138 1 4 964 795 309 11 0 chr13 49709383 49709564 -70574748 + ID_B1 SINE B4 7 189 -35 4 964 246 144 11 78 chr13 49709578 49709668 -70574644 + A-rich Low_complexity Low_complexity 2 85 0 4 964 286 303 22 0 chr13 49709865 49709954 -70574358 + BC1_Mm scRNA scRNA 2 92 -60 4 964 318 81 243 0 chr13 49710157 49710231 -70574081 + Lx3C LINE L1 6836 6927 -49 4 964 347 21 43 0 chr13 49710231 49710278 -70574034 + (TATG)n Simple_repeat Simple_repeat 2 50 0 4 964 273 193 100 22 chr13 49710278 49710293 -70574019 + Lx3B LINE L1 6914 6932 -41 4 964 244 284 62 27 chr13 49710298 49710410 -70573902 + L1M3 LINE L1 4667 4782 -1358 4 964 392 242 110 0 chr13 49710453 49710544 -70573768 + RSINE1 SINE B4 32 132 -33 4 964 213 231 0 0 chr13 49711386 49711438 -70572874 + T-rich Low_complexity Low_complexity 1 52 0 4 964 303 272 12 36 chr13 49711438 49711522 -70572790 - ID_B1 SINE B4 -38 186 105 4 964 315 200 25 74 chr13 49711581 49711662 -70572650 + B3 SINE B2 4 80 -136 4 964 318 279 0 0 chr13 49712273 49712341 -70571971 + ID4 SINE ID 5 72 -11 4 964 1304 281 96 2 chr13 49712435 49712852 -70571460 - MER82 DNA MER2_type -195 458 3 4 964 21 0 0 0 chr13 49713043 49713064 -70571248 + AT_rich Low_complexity Low_complexity 1 21 0 4 964 303 263 0 0 chr13 49713240 49713316 -70570996 + ID4_ SINE ID 2 77 -6 4 964 616 267 33 7 chr13 49713754 49713905 -70570407 - RSINE1 SINE B4 -4 161 7 4 964 284 279 0 0 chr13 49714093 49714154 -70570158 + ID4_ SINE ID 3 63 -20 4 964 224 398 85 8 chr13 49714154 49714222 -70570090 + ID_B1 SINE B4 3 141 -83 4 964 461 217 11 0 chr13 49714573 49714665 -70569647 + B1F2 SINE Alu 44 136 -13 4 964 282 56 0 0 chr13 49714665 49714701 -70569611 + (CAA)n Simple_repeat Simple_repeat 1 36 0 4 964 234 329 139 0 chr13 49714714 49714793 -70569519 + PB1 SINE Alu 18 107 -20 4 964 743 106 138 0 chr13 49714893 49715016 -70569296 + B1_Mus1 SINE Alu 1 140 -8 4 964 250 308 19 0 chr13 49715134 49715241 -70569071 + PB1 SINE Alu 1 109 -18 4 964 204 40 0 0 chr13 49715253 49715278 -70569034 + (GGAA)n Simple_repeat Simple_repeat 2 26 0 4 964 237 298 18 0 chr13 49715480 49715537 -70568775 + RSINE1 SINE B4 4 61 -104 4 964 734 211 211 0 chr13 49716709 49716880 -70567432 - B3 SINE B2 -7 209 3 4 964 297 279 0 0 chr13 49716942 49717003 -70567309 - ID4 SINE ID -7 76 16 4 964 252 219 228 50 chr13 49717273 49717374 -70566938 - MER21B LTR ERV1 -109 754 636 4 964 256 226 97 0 chr13 49719978 49720040 -70564272 - ID4_ SINE ID -13 70 3 4 964 470 251 154 3 chr13 49720398 49720573 -70563739 + B3A SINE B2 7 215 -1 4 964 1572 158 118 37 chr13 49720643 49720998 -70563314 + ORR1C2 LTR MaLR 1 384 0 4 964 303 275 51 51 chr13 49721016 49721250 -70563062 + L1M2 LINE L1 4597 4830 -1313 4 964 1747 84 26 4 chr13 49721747 49722011 -70562301 + L1_Mur1 LINE L1 4205 4474 -1412 4 964 534 200 99 46 chr13 49722046 49722177 -70562135 - B1_Mur2 SINE Alu -10 139 2 4 964 276 241 30 130 chr13 49722393 49722493 -70561819 + MT2B LTR ERVL 169 258 -343 4 964 763 189 38 0 chr13 49722404 49722536 -70561776 + B1_Mur2 SINE Alu 13 149 0 4 964 208 281 183 0 chr13 49722884 49722966 -70561346 + L2b LINE L2 3060 3156 -219 4 964 955 45 86 29 chr13 49723036 49723175 -70561137 - B1_Mm SINE Alu 0 147 1 4 964 335 91 0 0 chr13 49723283 49723327 -70560985 + HAL1-3A_ME LINE L1 1969 2012 -846 4 964 256 161 0 31 chr13 49723327 49723391 -70560921 + (TA)n Simple_repeat Simple_repeat 1 62 0 4 964 642 151 21 74 chr13 49723793 49724025 -70560287 + BGLII_B LTR ERVK 65 285 -160 4 964 2597 170 101 61 chr13 49724089 49724909 -70559403 + RMER19B LTR ERVK 4 895 -7 4 964 323 292 103 9 chr13 49724918 49725025 -70559287 + BGLII_B LTR ERVK 316 432 -9 4 964 1239 41 0 0 chr13 49725996 49726143 -70558169 + B1_Mm SINE Alu 1 147 0 4 964 195 114 0 0 chr13 49726144 49726179 -70558133 + (A)n Simple_repeat Simple_repeat 1 35 0 4 964 228 200 0 0 chr13 49726175 49726225 -70558087 + GA-rich Low_complexity Low_complexity 3 52 0 4 964 475 258 46 50 chr13 49726316 49726614 -70557698 + L1MC4 LINE L1 6485 6810 -1232 4 964 565 325 71 0 chr13 49726837 49726991 -70557321 + B3A SINE B2 1 165 -33 4 964 3064 159 103 11 chr13 49727082 49727725 -70556587 + Lx2B LINE L1 6296 6997 -3 4 964 1451 66 0 16 chr13 49727923 49728109 -70556203 + B2_Mm1a SINE B2 3 185 -8 4 964 451 249 249 0 chr13 49728410 49728579 -70555733 - Lx5 LINE L1 -3 7047 6837 4 964 955 219 70 21 chr13 49728629 49728871 -70555441 + Lx8 LINE L1 6828 7081 -392 4 964 5571 2 0 0 chr13 49728874 49729485 -70554827 - L1Md_A LINE L1 0 6582 5972 4 964 10744 2 0 0 chr13 49729485 49730801 -70553511 + L1Md_A LINE L1 4637 5955 -627 4 964 575 228 51 46 chr13 49730790 49730965 -70553347 + Lx8 LINE L1 7071 7246 -227 4 964 235 269 115 0 chr13 49731133 49731237 -70553075 + L1MC4 LINE L1 7560 7675 -367 4 964 544 264 0 11 chr13 49731624 49731761 -70552551 + B1_Mur1 SINE Alu 1 128 -21 4 964 192 217 0 0 chr13 49731761 49731807 -70552505 + GA-rich Low_complexity Low_complexity 5 50 0 4 964 506 54 14 0 chr13 49731956 49732030 -70552282 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 964 236 171 0 0 chr13 49732060 49732101 -70552211 + L1MCc LINE L1 746 786 -6157 4 964 328 267 166 42 chr13 49732154 49732334 -70551978 - B3A SINE B2 -27 189 1 4 964 451 256 84 47 chr13 49732334 49732547 -70551765 + Lx8 LINE L1 7220 7440 -33 4 964 344 379 8 0 chr13 49732549 49732681 -70551631 + L1ME3B LINE L1 5815 5947 -293 4 964 333 0 0 0 chr13 49733046 49733083 -70551229 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 964 465 103 0 0 chr13 49733083 49733151 -70551161 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 964 700 210 164 13 chr13 49733195 49733348 -70550964 + B3 SINE B2 3 176 -40 4 964 1087 188 50 25 chr13 49733349 49733589 -70550723 + RMER10A LTR ERVL 1 246 -196 4 964 827 153 3 145 chr13 49733589 49733872 -70550440 - RLTR19-int LTR ERVK -2473 3664 3422 4 964 596 200 0 18 chr13 49733944 49734056 -70550256 + B1_Mus1 SINE Alu 33 142 -6 4 964 445 245 78 0 chr13 49734656 49734758 -70549554 + PB1D10 SINE Alu 1 110 -7 4 964 426 247 49 1 chr13 49734788 49734917 -70549395 + L1M5 LINE L1 5472 5609 -570 4 964 295 286 143 0 chr13 49735000 49735077 -70549235 - MER58A DNA MER1_type -66 158 71 4 964 298 283 115 48 chr13 49735649 49735753 -70548559 + B3A SINE B2 47 157 -41 4 964 272 277 131 0 chr13 49735888 49736025 -70548287 + L1MCc LINE L1 1269 1423 -5000 4 964 286 271 47 12 chr13 49736059 49736145 -70548167 + PB1D10 SINE Alu 21 109 -8 4 964 355 226 45 45 chr13 49736211 49736299 -70548013 + B3 SINE B2 129 216 0 4 964 618 154 293 12 chr13 49736399 49736563 -70547749 + B3 SINE B2 1 210 -6 4 964 262 252 81 65 chr13 49736978 49736990 -70547322 - ID_B1 SINE B4 -17 207 84 4 964 549 165 91 9 chr13 49736990 49737100 -70547212 - B1_Mur3 SINE Alu -28 121 3 4 964 229 149 60 130 chr13 49737117 49737167 -70547145 + L1M LINE L1 5279 5322 -856 4 964 1628 27 0 0 chr13 49737167 49737355 -70546957 + B2_Mm1a SINE B2 1 188 -5 4 964 294 85 22 3 chr13 49737355 49737404 -70546908 + L1M LINE L1 5323 5371 -807 4 964 189 175 0 0 chr13 49737446 49737486 -70546826 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 964 624 279 108 23 chr13 49737711 49738063 -70546249 + L1MB5 LINE L1 5621 6002 -172 4 964 518 291 30 6 chr13 49738135 49738301 -70546011 + B3A SINE B2 23 192 -6 4 964 629 221 0 22 chr13 49738725 49738864 -70545448 + B1F SINE Alu 4 139 -10 4 964 192 77 0 0 chr13 49739653 49739679 -70544633 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 4 964 1992 155 104 8 chr13 49740209 49740592 -70543720 + MTC LTR MaLR 1 420 -1 4 964 976 149 0 0 chr13 49740803 49740951 -70543361 + B1_Mus1 SINE Alu 1 148 0 4 964 1351 209 180 12 chr13 49740972 49741332 -70542980 - MTD LTR MaLR -14 405 1 4 964 653 227 171 0 chr13 49741422 49741598 -70542714 - B3 SINE B2 -6 210 5 4 964 278 359 32 11 chr13 49741623 49741716 -70542596 + ID_B1 SINE B4 63 157 -67 4 964 381 318 94 60 chr13 49741646 49741763 -70542549 + PB1D10 SINE Alu 7 127 0 4 964 3413 51 5 2 chr13 49742332 49742765 -70541547 + L1Md_F2 LINE L1 6147 6580 -2 4 964 1063 67 7 0 chr13 49743392 49743527 -70540785 + B1_Mus1 SINE Alu 2 137 -11 4 964 562 237 11 152 chr13 49743597 49743781 -70540531 - RSINE1 SINE B4 0 165 8 4 964 603 314 0 65 chr13 49743830 49744000 -70540312 + RSINE1 SINE B4 6 164 -1 4 964 984 103 0 27 chr13 49744225 49744374 -70539938 - B1_Mus1 SINE Alu -1 147 3 5 964 880 144 7 33 chr13 49744578 49744729 -70539583 - B1_Mur3 SINE Alu -2 147 1 5 964 222 35 0 0 chr13 49745088 49745107 -70539205 + (A)n Simple_repeat Simple_repeat 1 19 0 5 964 1166 68 0 13 chr13 49745107 49745256 -70539056 + B1_Mus2 SINE Alu 1 147 0 5 964 222 35 0 0 chr13 49745256 49745265 -70539047 + (A)n Simple_repeat Simple_repeat 1 9 0 5 964 892 213 15 41 chr13 49745761 49745957 -70538355 + B3 SINE B2 1 191 -25 5 964 204 40 0 0 chr13 49746054 49746079 -70538233 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 5 964 306 325 134 60 chr13 49746354 49746488 -70537824 + RSINE1 SINE B4 3 146 -19 5 964 180 0 0 0 chr13 49746494 49746514 -70537798 + (TAA)n Simple_repeat Simple_repeat 2 21 0 5 964 306 0 0 0 chr13 49747333 49747367 -70536945 + (A)n Simple_repeat Simple_repeat 1 34 0 5 964 180 0 0 0 chr13 49747590 49747610 -70536702 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 964 566 275 57 21 chr13 49750319 49750460 -70533852 + B1_Mur2 SINE Alu 2 147 -2 5 964 663 209 75 85 chr13 49751691 49751890 -70532422 + B3A SINE B2 1 197 -1 5 964 796 298 57 54 chr13 49752241 49752621 -70531691 + MTE2a LTR MaLR 20 405 -14 5 964 1149 164 65 5 chr13 49753004 49753219 -70531093 - ORR1D1 LTR MaLR -132 242 15 5 964 972 135 7 13 chr13 49753777 49753927 -70530385 + B1_Mur4 SINE Alu 1 149 -1 5 964 684 289 65 43 chr13 49754507 49754634 -70529678 - Lx8 LINE L1 0 7473 7354 5 964 288 0 0 0 chr13 49754634 49754666 -70529646 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 964 684 289 65 43 chr13 49754666 49754863 -70529449 - Lx8 LINE L1 -120 7353 7143 5 964 685 244 16 78 chr13 49754869 49755060 -70529252 - ID_B1 SINE B4 -35 189 11 5 964 755 236 7 0 chr13 49755642 49755790 -70528522 + B1_Mur1 SINE Alu 1 149 0 5 964 181 325 83 8 chr13 49756136 49756257 -70528055 - MIR SINE MIR -54 208 79 5 964 1148 68 0 20 chr13 49758327 49758476 -70525836 + B1_Mus2 SINE Alu 2 147 0 5 964 330 132 0 0 chr13 49758476 49758529 -70525783 + (A)n Simple_repeat Simple_repeat 1 53 0 5 964 367 247 50 30 chr13 49761160 49761260 -70523052 - PB1D10 SINE Alu -15 102 1 5 964 585 274 6 19 chr13 49761320 49761480 -70522832 - RSINE1 SINE B4 -5 160 3 5 964 227 93 23 0 chr13 49761481 49761524 -70522788 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 5 964 1486 48 37 0 chr13 49761952 49762140 -70522172 - B2_Mm2 SINE B2 0 195 1 5 964 233 338 0 0 chr13 49762947 49763027 -70521285 - ID2 SINE ID -2 81 2 5 964 707 200 8 32 chr13 49763131 49763285 -70521027 + B1_Mur3 SINE Alu 3 148 -1 5 964 399 193 0 0 chr13 49763296 49763379 -70520933 + GA-rich Low_complexity Low_complexity 2 84 0 5 964 969 138 129 62 chr13 49763541 49763697 -70520615 + URR1A DNA MER1_type 4 184 -42 5 964 1316 72 50 0 chr13 49763697 49763877 -70520435 - B2_Mm1a SINE B2 -3 190 2 5 964 969 138 129 62 chr13 49763877 49763929 -70520383 + URR1A DNA MER1_type 185 226 0 5 964 282 294 194 10 chr13 49764113 49764216 -70520096 - B1F2 SINE Alu -27 122 1 5 964 399 311 54 62 chr13 49764235 49764365 -70519947 - RSINE1 SINE B4 -8 157 29 5 964 456 209 20 48 chr13 49764363 49764502 -70519810 - PB1D9 SINE Alu -8 141 17 5 964 661 262 109 106 chr13 49764611 49764987 -70519325 - MTE2a LTR MaLR 0 379 3 5 964 287 359 26 0 chr13 49765300 49765417 -70518895 - MER58B DNA MER1_type -2 339 220 5 964 956 214 14 86 chr13 49765444 49765654 -70518658 - B3 SINE B2 -12 204 10 5 964 536 269 54 0 chr13 49765725 49765855 -70518457 + B3 SINE B2 7 143 -73 5 964 1142 81 0 0 chr13 49765880 49766028 -70518284 - B1_Mus1 SINE Alu 0 148 1 5 964 763 289 128 52 chr13 49766029 49766412 -70517900 - MLT1F-int LTR MaLR -978 511 100 5 964 1242 229 30 46 chr13 49766560 49766927 -70517385 + Lx7 LINE L1 7023 7383 -313 5 964 252 175 48 0 chr13 49766950 49767013 -70517299 + Lx7 LINE L1 7615 7680 -16 5 964 572 174 155 9 chr13 49767028 49767144 -70517168 + B1_Mur3 SINE Alu 17 149 0 5 964 1009 125 31 0 chr13 49767166 49767326 -70516986 - B2_Mm1t SINE B2 -3 190 26 5 964 220 338 13 13 chr13 49767614 49767692 -70516620 - MIR3 SINE MIR -7 201 124 5 964 429 20 0 0 chr13 49768757 49768807 -70515505 + (GA)n Simple_repeat Simple_repeat 2 51 0 5 964 753 223 0 39 chr13 49768815 49768969 -70515343 - B3A SINE B2 -48 150 3 5 964 434 279 45 0 chr13 49768973 49769084 -70515228 - B1F SINE Alu 0 149 34 5 964 660 260 49 11 chr13 49769255 49769446 -70514866 + B3A SINE B2 1 193 -23 5 964 209 172 0 45 chr13 49769856 49769876 -70514436 + T-rich Low_complexity Low_complexity 45 64 0 5 964 1212 54 0 0 chr13 49769876 49770023 -70514289 - B1_Mus2 SINE Alu 0 147 1 5 964 209 172 0 45 chr13 49770023 49770069 -70514243 + T-rich Low_complexity Low_complexity 2 44 0 5 964 843 183 21 0 chr13 49770071 49770213 -70514099 - B1_Mur2 SINE Alu -3 146 2 5 964 1060 85 43 0 chr13 49770376 49770517 -70513795 + B1_Mus2 SINE Alu 1 147 0 5 964 1209 74 97 0 chr13 49770992 49771167 -70513145 - B2_Mm2 SINE B2 -2 193 2 5 964 265 320 123 15 chr13 49771498 49771628 -70512684 - B1F2 SINE Alu 0 149 6 5 964 429 20 0 0 chr13 49772473 49772523 -70511789 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 5 964 382 291 42 42 chr13 49772715 49772927 -70511385 - RLTR42-int LTR ERVK -4122 1400 1189 5 964 2303 152 151 21 chr13 49773118 49773636 -70510676 + RMER4B LTR ERVK 1 585 0 5 964 325 290 110 0 chr13 49774018 49774118 -70510194 + PB1 SINE Alu 12 122 -5 5 964 225 290 14 14 chr13 49775212 49775282 -70509030 - MLT1H2 LTR MaLR -240 249 180 5 964 287 250 0 0 chr13 49775551 49775603 -70508709 - ID4_ SINE ID -29 54 3 5 964 207 0 0 0 chr13 49775624 49775647 -70508665 + (A)n Simple_repeat Simple_repeat 1 23 0 5 964 283 184 12 62 chr13 49775681 49775762 -70508550 - RLTR25B LTR ERVK -510 518 442 5 964 635 128 0 11 chr13 49775698 49775793 -70508519 - B1_Mus2 SINE Alu -43 104 11 5 964 267 305 64 56 chr13 49775699 49775824 -70508488 - B4A SINE B4 -98 194 69 5 964 443 204 17 100 chr13 49775793 49775811 -70508501 - MT2B LTR ERVL -337 238 155 5 964 210 150 0 0 chr13 49775836 49775876 -70508436 + (T)n Simple_repeat Simple_repeat 1 40 0 5 964 1093 76 7 14 chr13 49775877 49776023 -70508289 - B1_Mus2 SINE Alu -1 146 2 5 964 607 232 77 21 chr13 49776793 49776987 -70507325 + ID_B1 SINE B4 4 208 -16 5 964 484 194 0 11 chr13 49777087 49777181 -70507131 + B2_Mm2 SINE B2 1 93 -102 5 964 960 298 56 6 chr13 49778427 49778751 -70505561 + MER2 DNA MER2_type 2 341 -4 5 964 356 211 91 12 chr13 49778995 49779080 -70505232 - B1F1 SINE Alu -20 100 10 5 964 268 254 14 29 chr13 49779191 49779260 -70505052 + ID4_ SINE ID 12 79 -4 5 964 484 281 16 8 chr13 49779380 49779502 -70504810 + ID_B1 SINE B4 100 222 -2 5 964 215 51 0 71 chr13 49780363 49780405 -70503907 + (T)n Simple_repeat Simple_repeat 1 39 0 5 964 679 199 88 7 chr13 49780741 49780878 -70503434 - B1_Mur1 SINE Alu 0 149 2 5 964 2178 144 121 16 chr13 49780917 49781298 -70503014 - MTC LTR MaLR 0 421 1 5 964 2495 50 63 0 chr13 49781387 49781705 -70502607 + ORR1A0 LTR MaLR 1 338 -8 5 964 262 264 104 0 chr13 49781712 49781837 -70502475 + L1MB8 LINE L1 5256 5393 -753 5 964 745 220 147 18 chr13 49781888 49782161 -70502151 + L1MB8 LINE L1 5495 5802 -376 5 964 342 0 0 0 chr13 49782276 49782314 -70501998 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 5 964 781 165 71 0 chr13 49782315 49782442 -70501870 - B1_Mur4 SINE Alu -13 137 2 5 964 328 236 279 20 chr13 49782448 49782595 -70501717 + L1MB8 LINE L1 5923 6107 -71 5 964 1067 139 0 48 chr13 49784253 49784442 -70499870 + B2_Mm2 SINE B2 2 181 -14 5 964 616 167 0 0 chr13 49784760 49784856 -70499456 - B1_Mur2 SINE Alu -49 100 5 5 964 315 318 38 15 chr13 49785028 49785159 -70499153 - L1MC4a LINE L1 -215 7667 7534 5 964 362 293 68 21 chr13 49785223 49785415 -70498897 - L1MC4a LINE L1 -531 7351 7151 5 964 458 307 62 16 chr13 49785448 49785577 -70498735 + B1F2 SINE Alu 3 137 -12 5 964 302 275 60 68 chr13 49786194 49786311 -70498001 + PB1D10 SINE Alu 1 116 -1 5 964 210 188 70 28 chr13 49786606 49786677 -70497635 - ID4_ SINE ID -9 74 1 5 964 1419 79 11 0 chr13 49787620 49787810 -70496502 - B2_Mm1t SINE B2 -1 192 1 5 964 22 0 0 0 chr13 49787890 49787912 -70496400 + AT_rich Low_complexity Low_complexity 1 22 0 5 964 313 20 20 39 chr13 49788111 49788162 -70496150 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 5 964 814 79 83 45 chr13 49788162 49788294 -70496018 - B1_Mus1 SINE Alu -9 139 3 5 964 282 286 133 9 chr13 49788668 49788781 -70495531 + PB1 SINE Alu 1 127 0 5 964 4549 10 0 0 chr13 49789164 49789657 -70494655 + MT2_Mm LTR ERVL 1 493 0 5 964 41458 16 14 0 chr13 49789657 49794944 -70489368 + MERVL-int LTR ERVL 1 5360 -125 5 964 403 167 46 35 chr13 49794944 49795031 -70489281 + ORR1A3-int LTR MaLR 553 640 -1323 5 964 319 0 0 0 chr13 49795031 49795069 -70489243 + MERVL-int LTR ERVL 5448 5485 0 5 964 4549 10 0 0 chr13 49795069 49795562 -70488750 + MT2_Mm LTR ERVL 1 493 0 5 964 255 235 0 0 chr13 49795572 49795623 -70488689 + ID_B1 SINE B4 174 224 0 5 964 402 39 0 0 chr13 49796564 49796616 -70487696 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 964 441 36 0 0 chr13 49796624 49796679 -70487633 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 964 591 157 138 16 chr13 49796801 49796924 -70487388 - B1_Mur1 SINE Alu -2 147 10 5 964 600 285 72 22 chr13 49797542 49797818 -70486494 - B4A SINE B4 0 292 3 5 964 187 306 39 39 chr13 49798102 49798204 -70486108 + L2c LINE L2 3021 3122 -265 6 964 351 0 0 0 chr13 49798219 49798258 -70486054 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 964 401 294 53 59 chr13 49798273 49798443 -70485869 - B4A SINE B4 0 292 124 6 964 550 221 92 35 chr13 49799247 49799388 -70484924 - B1_Mur1 SINE Alu 0 149 1 6 964 231 190 0 0 chr13 49800458 49800516 -70483796 + T-rich Low_complexity Low_complexity 1 58 0 6 964 529 209 59 15 chr13 49800534 49800670 -70483642 - B1_Mus2 SINE Alu -2 145 4 6 964 300 207 0 17 chr13 49800719 49800778 -70483534 - B3A SINE B2 -140 58 1 6 964 424 217 123 0 chr13 49801506 49801612 -70482700 + PB1D9 SINE Alu 1 119 -1 6 964 561 234 21 21 chr13 49802487 49802627 -70481685 + B1_Mur1 SINE Alu 8 147 -2 6 964 497 53 40 0 chr13 49803137 49803282 -70481030 + L1Md_F3 LINE L1 6498 6584 0 6 964 1368 99 10 5 chr13 49803293 49803485 -70480827 + B2_Mm2 SINE B2 2 194 -1 6 964 476 209 13 92 chr13 49804056 49804209 -70480103 - B1_Mur2 SINE Alu -7 142 2 6 964 471 250 98 0 chr13 49804429 49804561 -70479751 + ID_B1 SINE B4 80 224 0 6 964 219 36 0 0 chr13 49804564 49804592 -70479720 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 6 964 276 30 0 0 chr13 49805202 49805235 -70479077 + (T)n Simple_repeat Simple_repeat 1 33 0 6 964 935 32 187 0 chr13 49805235 49805358 -70478954 - B1_Mus2 SINE Alu 0 147 2 6 964 488 255 12 92 chr13 49806013 49806177 -70478135 - B3A SINE B2 -4 194 44 6 964 580 266 0 0 chr13 49806873 49807001 -70477311 + RSINE1 SINE B4 1 128 -37 6 120 387 250 9 74 chr13 49807327 49807435 -70476877 - B1_Mur4 SINE Alu -10 140 40 6 965 1492 248 87 53 chr13 49807604 49808038 -70476274 - RLTR18 LTR ERVK -105 511 164 6 965 882 50 0 0 chr13 49808038 49808158 -70476154 + (CA)n Simple_repeat Simple_repeat 1 120 0 6 965 1492 241 83 58 chr13 49808158 49808280 -70476032 - RLTR18 LTR ERVK -453 163 33 6 965 4703 103 46 20 chr13 49808593 49809325 -70474987 + RMER17A LTR ERVK 1 751 0 6 965 229 253 93 0 chr13 49809357 49809432 -70474880 - Tigger10 DNA Tigger -222 1621 1540 6 965 243 200 20 20 chr13 49809652 49809703 -70474609 - MTD LTR MaLR -8 411 361 6 965 288 269 101 101 chr13 49809814 49809936 -70474376 + RSINE1 SINE B4 15 140 -25 6 965 288 53 0 0 chr13 49809936 49809974 -70474338 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 965 288 269 101 101 chr13 49809974 49810000 -70474312 + RSINE1 SINE B4 141 163 -2 6 965 250 250 94 0 chr13 49810906 49810970 -70473342 - U5 snRNA snRNA -36 80 11 6 965 1226 112 6 0 chr13 49811622 49811792 -70472520 + B2_Mm1t SINE B2 1 171 -22 6 965 397 204 247 62 chr13 49811796 49811958 -70472354 + B2_Mm1t SINE B2 2 193 0 6 965 365 267 0 0 chr13 49812858 49812933 -70471379 + B3 SINE B2 2 76 -140 6 965 1385 87 16 16 chr13 49812997 49813185 -70471127 + B2_Mm2 SINE B2 2 189 -6 6 965 1334 84 0 21 chr13 49813463 49813657 -70470655 - B2_Mm2 SINE B2 -5 190 1 6 965 596 162 16 90 chr13 49815091 49815213 -70469099 + PB1D9 SINE Alu 2 114 -6 6 965 420 244 151 24 chr13 49815563 49815769 -70468543 - RMER15 LTR ERVL -64 511 280 6 965 258 100 0 0 chr13 49818537 49818558 -70465754 + (A)n Simple_repeat Simple_repeat 1 21 0 6 965 1258 48 0 0 chr13 49818558 49818705 -70465607 + B1_Mus2 SINE Alu 1 147 0 6 965 258 100 0 0 chr13 49818705 49818723 -70465589 + (A)n Simple_repeat Simple_repeat 1 18 0 6 965 398 237 57 76 chr13 49818973 49819078 -70465234 - PB1D7 SINE Alu -27 122 20 6 965 488 202 80 27 chr13 49819242 49819354 -70464958 - PB1D9 SINE Alu -2 118 1 6 965 377 273 122 0 chr13 49819536 49819716 -70464596 - L1MB8 LINE L1 -192 5982 5769 6 965 295 234 0 86 chr13 49819725 49819739 -70464573 - ID_B1 SINE B4 -132 92 29 6 965 299 232 0 0 chr13 49819739 49819795 -70464517 - ID4 SINE ID 0 83 28 6 965 307 277 0 0 chr13 49819840 49819927 -70464385 - L1MB8 LINE L1 -405 5768 5682 6 965 384 22 0 0 chr13 49820724 49820769 -70463543 + (ATTG)n Simple_repeat Simple_repeat 3 47 0 6 965 458 238 97 16 chr13 49820770 49820894 -70463418 - ID_B1 SINE B4 -7 217 84 6 965 307 242 152 0 chr13 49821103 49821202 -70463110 - B3 SINE B2 -100 116 3 6 965 588 95 0 0 chr13 49821288 49821372 -70462940 + (CGTG)n Simple_repeat Simple_repeat 2 85 0 6 965 180 111 0 0 chr13 49822733 49822760 -70461552 + (T)n Simple_repeat Simple_repeat 1 27 0 6 965 1158 69 14 0 chr13 49822760 49822905 -70461407 - B1_Mm SINE Alu 0 147 1 6 965 702 247 257 18 chr13 49822937 49823221 -70461091 - MTE2b LTR MaLR 0 379 28 6 965 498 100 29 39 chr13 49823553 49823657 -70460655 - Lx9 LINE L1 -8 7636 7534 6 965 271 297 56 81 chr13 49824529 49824690 -70459622 + L1MDa LINE L1 278 434 -6199 6 965 308 302 134 58 chr13 49824932 49825104 -70459208 + L1MDa LINE L1 829 1013 -5620 6 965 315 258 104 52 chr13 49825838 49825973 -70458339 + B4A SINE B4 2 143 -149 6 965 362 181 28 0 chr13 49826220 49826292 -70458020 + ID4 SINE ID 1 74 -9 6 965 274 133 0 43 chr13 49826381 49826428 -70457884 - B1_Mur3 SINE Alu -13 136 92 6 965 216 86 0 0 chr13 49826434 49826469 -70457843 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 965 225 0 0 0 chr13 49826469 49826494 -70457818 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 965 284 136 23 0 chr13 49826560 49826604 -70457708 + tRNA-Ala-GCY_ tRNA tRNA 17 61 -14 6 965 273 211 53 0 chr13 49826604 49826617 -70457695 + ID4_ SINE ID 23 82 -1 6 965 215 178 282 126 chr13 49827043 49827146 -70457166 + PB1D7 SINE Alu 1 119 -1 6 965 253 232 85 0 chr13 49828306 49828391 -70455921 - L1MCa LINE L1 -5030 1478 1401 6 965 416 362 133 39 chr13 49828482 49828948 -70455364 - MER77 LTR ERVL -51 556 47 6 965 297 68 0 0 chr13 49829184 49829228 -70455084 + (TC)n Simple_repeat Simple_repeat 2 45 0 6 965 195 42 0 0 chr13 49829228 49829252 -70455060 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 965 202 0 91 0 chr13 49830384 49830417 -70453895 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 6 965 548 374 15 29 chr13 49830418 49830622 -70453690 - LTR16B1 LTR ERVL -277 203 3 6 965 334 325 40 58 chr13 49830622 49830795 -70453517 + HAL1 LINE L1 102 271 -2236 6 965 229 33 0 0 chr13 49831170 49831200 -70453112 + B3 SINE B2 1 30 -186 6 965 317 333 28 37 chr13 49831456 49831565 -70452747 + RSINE1 SINE B4 44 151 -14 6 965 264 292 108 0 chr13 49831688 49831753 -70452559 + B1_Mus2 SINE Alu 5 76 -71 6 965 241 170 0 0 chr13 49832119 49832166 -70452146 + A-rich Low_complexity Low_complexity 1 47 0 6 965 251 254 219 0 chr13 49832180 49832294 -70452018 + B3A SINE B2 38 176 -22 6 965 1156 185 25 0 chr13 49832524 49832724 -70451588 - B3 SINE B2 -11 205 1 6 965 722 138 48 16 chr13 49833024 49833149 -70451163 + B1_Mur2 SINE Alu 8 136 -13 6 965 414 0 0 0 chr13 49833610 49833656 -70450656 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 965 686 229 35 7 chr13 49833710 49833855 -70450457 + B1_Mur1 SINE Alu 1 149 0 6 965 697 215 128 39 chr13 49835366 49835798 -70448514 + RMER17C LTR ERVK 1 410 0 6 965 297 0 0 0 chr13 49835871 49835904 -70448408 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 965 1327 230 94 31 chr13 49836081 49836431 -70447881 + MurERV4-int LTR ERVK 1479 1850 -3410 6 965 1675 145 86 39 chr13 49836427 49836765 -70447547 + MurERV4-int LTR ERVK 4827 5180 -80 6 965 251 301 51 120 chr13 49836888 49837005 -70447307 + B3 SINE B2 102 210 -6 6 965 948 253 28 24 chr13 49837081 49837369 -70446943 - B4A SINE B4 0 292 4 6 965 317 271 56 24 chr13 49837469 49837594 -70446718 - L1MCa LINE L1 -4074 2343 2215 6 965 234 196 22 0 chr13 49837603 49837649 -70446663 - B1_Mus1 SINE Alu -101 47 1 6 965 344 300 80 7 chr13 49837653 49837804 -70446508 - L1MCa LINE L1 -5341 1167 1006 6 965 219 69 0 0 chr13 49838075 49838104 -70446208 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 965 305 312 13 0 chr13 49838107 49838184 -70446128 - RSINE1 SINE B4 -4 161 84 6 965 368 276 32 0 chr13 49838265 49838388 -70445924 - L1MD LINE L1 -3346 2800 2674 6 965 32 0 0 0 chr13 49839517 49839549 -70444763 + AT_rich Low_complexity Low_complexity 1 32 0 6 965 234 289 196 22 chr13 49839646 49839784 -70444528 - MER34 LTR ERV1 -3 539 378 6 965 719 225 7 0 chr13 49839900 49840042 -70444270 - B1F2 SINE Alu -6 143 1 6 965 453 84 0 0 chr13 49840182 49840253 -70444059 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 965 342 0 0 0 chr13 49840520 49840558 -70443754 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 965 342 220 47 35 chr13 49840559 49840644 -70443668 + B4 SINE B4 147 232 -60 6 965 3202 31 0 0 chr13 49840698 49841055 -70443257 - IAPEY2_LTR LTR ERVK 0 357 1 6 965 3380 111 23 32 chr13 49841055 49841774 -70442538 - IAPEY3-int LTR ERVK 0 7581 6910 6 965 505 34 0 0 chr13 49841777 49841836 -70442476 - IAPEY3-int LTR ERVK -2770 4910 4852 6 965 3687 58 9 0 chr13 49841829 49842277 -70442035 - IAPEY3-int LTR ERVK -4991 2689 2238 6 965 9655 121 11 37 chr13 49842254 49843751 -70440561 - IAPEY3-int LTR ERVK -5698 1982 524 6 965 785 164 49 37 chr13 49843750 49843914 -70440398 - IAPLTR4_I LTR ERVK -1290 180 15 6 965 2704 38 0 0 chr13 49843916 49844234 -70440078 - IAPEY2_LTR LTR ERVK -8 349 32 6 965 321 212 126 23 chr13 49844249 49844336 -70439976 - B3A SINE B2 -83 115 20 6 965 772 305 64 41 chr13 49844749 49845094 -70439218 + ORR1E LTR MaLR 1 353 -6 6 965 228 267 116 0 chr13 49845447 49845533 -70438779 + MIR SINE MIR 45 140 -122 6 965 302 299 23 26 chr13 49846743 49847023 -70437289 + MMSAT4 Satellite Satellite 1 279 -5 6 965 415 297 19 19 chr13 49847060 49847274 -70437038 + MMSAT4 Satellite Satellite 1 214 0 6 965 264 287 47 47 chr13 49847394 49847624 -70436688 + MMSAT4 Satellite Satellite 1 230 -15 6 965 311 268 47 30 chr13 49847649 49847831 -70436481 + MMSAT4 Satellite Satellite 1 185 0 6 965 893 106 20 34 chr13 49848249 49848395 -70435917 + B1_Mur4 SINE Alu 6 149 -1 6 965 276 75 35 86 chr13 49848962 49849020 -70435292 + PB1D9 SINE Alu 5 59 -61 7 965 1073 156 0 22 chr13 49849036 49849220 -70435092 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 7 965 449 299 6 11 chr13 49849130 49849309 -70435003 + GA-rich Low_complexity Low_complexity 2 179 0 7 965 443 154 53 42 chr13 49849313 49849408 -70434904 + B1_Mus2 SINE Alu 41 136 -11 7 965 615 261 51 32 chr13 49849448 49849606 -70434706 + RSINE1 SINE B4 3 163 -2 7 965 227 357 106 66 chr13 49849606 49849646 -70434666 + B3 SINE B2 2 207 -9 7 965 391 309 111 18 chr13 49849779 49849950 -70434362 - L1M5 LINE L1 -3580 2566 2380 7 965 424 231 18 71 chr13 49849965 49850077 -70434235 - B1F SINE Alu -1 148 43 7 965 198 316 38 50 chr13 49851427 49851507 -70432805 - MIRm SINE MIR -168 108 30 7 965 720 35 0 0 chr13 49852381 49852468 -70431844 + (GAA)n Simple_repeat Simple_repeat 2 88 0 7 965 228 337 11 11 chr13 49852700 49852787 -70431525 + B1F SINE Alu 14 100 -49 7 965 465 66 0 0 chr13 49853036 49853097 -70431215 + (CA)n Simple_repeat Simple_repeat 1 61 0 7 965 189 227 72 43 chr13 49853732 49853801 -70430511 - MIRm SINE MIR -19 257 187 7 965 187 365 18 45 chr13 49853803 49853915 -70430397 + L3 LINE CR1 3181 3289 -1200 7 965 1078 223 121 90 chr13 49854014 49854369 -70429943 - ORR1D2 LTR MaLR -2 368 3 7 965 21 0 0 0 chr13 49854964 49854985 -70429327 + AT_rich Low_complexity Low_complexity 1 21 0 7 965 2729 102 44 139 chr13 49855115 49855216 -70429096 + MT2C_Mm LTR ERVL 1 108 -367 7 965 1282 78 73 0 chr13 49855216 49855395 -70428917 - B2_Mm2 SINE B2 0 195 4 7 965 2729 102 44 139 chr13 49855395 49855441 -70428871 + MT2C_Mm LTR ERVL 109 109 -366 7 965 1246 54 0 0 chr13 49855441 49855588 -70428724 - B1_Mus2 SINE Alu 0 147 1 7 965 1364 81 17 0 chr13 49855590 49855763 -70428549 - B2_Mm2 SINE B2 -17 178 3 7 965 2729 102 44 139 chr13 49855763 49856136 -70428176 + MT2C_Mm LTR ERVL 109 475 0 7 965 320 104 21 12 chr13 49856443 49856501 -70427811 - ORR1C1 LTR MaLR 0 378 291 7 965 468 0 0 0 chr13 49856503 49856555 -70427757 + (GA)n Simple_repeat Simple_repeat 2 53 0 7 965 656 151 113 103 chr13 49856555 49856740 -70427572 - ORR1C1 LTR MaLR -191 187 1 7 965 947 129 37 12 chr13 49856803 49856961 -70427351 + ORR1B2 LTR MaLR 66 220 -147 7 965 264 312 19 96 chr13 49857637 49857793 -70426519 + MLT1K LTR MaLR 90 233 -362 7 965 294 293 78 0 chr13 49858296 49858412 -70425900 - L1MA4 LINE L1 -373 5927 5803 7 965 1058 282 94 78 chr13 49858406 49858749 -70425563 - L1MA4 LINE L1 -2248 3895 3517 7 965 186 43 0 0 chr13 49858749 49858772 -70425540 + (TTTTG)n Simple_repeat Simple_repeat 4 26 0 7 965 1083 69 0 0 chr13 49858780 49858911 -70425401 - B1_Mus1 SINE Alu -17 131 1 7 965 1058 282 94 78 chr13 49858911 49859172 -70425140 - L1MA4 LINE L1 -2628 3515 3289 7 965 1193 68 0 0 chr13 49859172 49859318 -70424994 - B1_Mus2 SINE Alu 0 147 2 7 965 1058 282 94 78 chr13 49859318 49859602 -70424710 - L1MA4 LINE L1 -2855 3288 2982 7 965 370 273 64 57 chr13 49863240 49863380 -70420932 - RLTR23 LTR ERV1 -4 426 286 7 965 2795 37 0 0 chr13 49864906 49865232 -70419080 - L1Md_T LINE L1 0 6582 6257 7 965 806 136 52 29 chr13 49866796 49866932 -70417380 - RMER15 LTR ERVL -90 485 347 7 965 4421 158 114 62 chr13 49866998 49867126 -70417186 - RMER12 LTR ERVK -104 1218 1096 7 965 1559 43 16 0 chr13 49867126 49867314 -70416998 + B2_Mm2 SINE B2 2 192 -3 7 965 4421 158 114 62 chr13 49867314 49867431 -70416881 - RMER12 LTR ERVK -227 1095 918 7 965 279 0 0 0 chr13 49867431 49867462 -70416850 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 965 4421 158 114 62 chr13 49867462 49868176 -70416136 - RMER12 LTR ERVK -405 917 209 7 965 965 193 116 3 chr13 49868168 49868437 -70415875 + RMER19A LTR ERVK 300 737 0 7 965 959 216 5 23 chr13 49868437 49868645 -70415667 + ORR1B1-int LTR MaLR 384 587 -922 7 965 1080 175 272 22 chr13 49868646 49868984 -70415328 + RMER1B Other Other 1 536 -530 7 965 340 259 137 75 chr13 49869517 49869663 -70414649 - MER58B DNA MER1_type -22 319 165 7 965 242 130 130 0 chr13 49870376 49870430 -70413882 + B2_Mm2 SINE B2 130 190 -5 7 965 645 185 37 30 chr13 49870862 49870996 -70413316 - MERVL_2A-int LTR ERVL -339 5422 5288 7 965 3826 191 61 50 chr13 49870986 49872066 -70412246 - MERVL_2A-int LTR ERVL -4575 1186 5 7 965 1015 245 32 84 chr13 49872103 49872411 -70411901 - MT2B LTR ERVL -40 561 270 7 965 2083 252 35 31 chr13 49872496 49873015 -70411297 + Lx6 LINE L1 6913 7433 -27 7 965 430 216 57 105 chr13 49873024 49873148 -70411164 - MT2B LTR ERVL -413 120 3 7 965 22 56 0 0 chr13 49873177 49873213 -70411099 + AT_rich Low_complexity Low_complexity 1 36 0 7 965 754 194 14 0 chr13 49873340 49873479 -70410833 - B1_Mur4 SINE Alu -8 142 2 7 965 557 214 17 4 chr13 49873689 49873815 -70410497 - B1_Mus2 SINE Alu -16 133 1 7 965 226 317 143 58 chr13 49873855 49874009 -70410303 + Tigger5 DNA MER2_type 138 304 -2102 7 965 617 272 52 68 chr13 49873976 49874148 -70410164 + Tigger5 DNA MER2_type 2155 2321 -85 7 965 3373 48 2 0 chr13 49874148 49874547 -70409765 + MTB LTR MaLR 1 400 0 7 965 617 272 52 68 chr13 49874547 49874626 -70409686 + Tigger5 DNA MER2_type 2322 2402 -4 7 965 586 37 0 24 chr13 49875245 49875328 -70408984 + (GGA)n Simple_repeat Simple_repeat 2 82 0 7 965 2339 170 54 5 chr13 49875830 49876238 -70408074 + Lx5 LINE L1 6337 6764 -286 7 965 931 228 139 19 chr13 49876362 49876621 -70407691 + Lx5 LINE L1 6757 7046 -4 7 965 831 186 116 6 chr13 49876645 49876818 -70407494 + RMER12 LTR ERVK 1072 1263 -59 7 965 249 33 0 0 chr13 49876919 49876949 -70407363 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 965 296 162 124 57 chr13 49877937 49878042 -70406270 - Lx9 LINE L1 0 7644 7533 7 965 213 65 0 0 chr13 49878045 49878076 -70406236 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 965 577 219 0 40 chr13 49878180 49878332 -70405980 - Lx2B LINE L1 0 7000 6855 7 965 619 159 128 22 chr13 49878335 49878515 -70405797 - L1_Mur3 LINE L1 -2052 3828 3630 7 965 567 263 117 23 chr13 49878512 49878812 -70405500 - L1_Mur3 LINE L1 -2969 2911 2584 7 965 260 208 161 88 chr13 49879016 49879153 -70405159 + Lx4B LINE L1 6912 7058 0 7 965 2437 169 121 11 chr13 49884807 49885334 -70398978 - RMER4B LTR ERVK 0 585 1 7 965 1749 122 12 0 chr13 49886192 49886445 -70397867 - L1_Mur1 LINE L1 -177 5709 5454 7 965 21 57 0 0 chr13 49886485 49886520 -70397792 + AT_rich Low_complexity Low_complexity 1 35 0 7 965 782 314 77 34 chr13 49886571 49887040 -70397272 - L1_Mur3 LINE L1 -233 5647 5161 7 965 752 175 20 20 chr13 49887040 49887186 -70397126 - B1_Mur4 SINE Alu 0 150 5 7 965 782 314 77 34 chr13 49887186 49887299 -70397013 - L1_Mur3 LINE L1 -720 5160 5042 7 965 3105 197 34 6 chr13 49888064 49888928 -70395384 - L1_Mur2 LINE L1 -3922 1955 1064 7 965 3875 169 89 75 chr13 49888943 49889818 -70394494 - RMER19B LTR ERVK -12 890 4 7 965 425 262 86 51 chr13 49889819 49890016 -70394296 - L1_Mur2 LINE L1 -6031 1055 852 7 965 1046 236 0 0 chr13 49890647 49890850 -70393462 + B3 SINE B2 2 204 -12 7 965 435 38 0 0 chr13 49890856 49890909 -70393403 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 7 965 1308 277 55 11 chr13 49890914 49891261 -70393051 + ORR1D2 LTR MaLR 1 362 -8 7 965 670 262 70 40 chr13 49891265 49891464 -70392848 + ORR1D2-int LTR MaLR 1 205 -1165 7 965 616 307 0 31 chr13 49891464 49891659 -70392653 - Lx7 LINE L1 -1300 6396 6208 7 965 311 241 151 14 chr13 49891691 49891830 -70392482 - RMER12 LTR ERVK -466 856 699 7 965 1114 266 64 56 chr13 49891832 49892333 -70391979 - Lx7 LINE L1 -1579 6117 5642 7 965 1092 240 4 20 chr13 49892839 49893086 -70391226 - Lx7 LINE L1 -257 5623 5381 7 965 1028 179 65 11 chr13 49893102 49893280 -70391032 - ORR1C2 LTR MaLR 0 384 196 7 965 566 28 0 14 chr13 49893280 49893353 -70390959 + (CAGG)n Simple_repeat Simple_repeat 1 72 0 7 965 1028 224 59 2077 chr13 49893353 49893397 -70390915 - ORR1C2 LTR MaLR -189 195 189 7 965 1126 21 56 4 chr13 49893397 49893629 -70390683 + (CAAGG)n Simple_repeat Simple_repeat 1 243 0 7 965 462 49 0 0 chr13 49893629 49893690 -70390622 + (CAGG)n Simple_repeat Simple_repeat 2 62 0 7 965 726 174 9 211 chr13 49893699 49893917 -70390395 - ORR1C2 LTR MaLR -200 174 1 7 965 839 214 345 24 chr13 49893917 49894250 -70390062 - ORR1C2-int LTR MaLR 0 1370 931 7 965 1321 141 172 19 chr13 49894692 49894953 -70389359 - RMER4B LTR ERVK 0 585 285 7 965 3127 27 46 0 chr13 49894957 49895326 -70388986 + RLTR10 LTR ERVK 1 386 -4 7 965 17184 21 5 8 chr13 49895342 49897292 -70387020 + RLTR10-int LTR ERVK 41 1984 -3 7 965 3236 21 46 0 chr13 49897294 49897667 -70386645 + RLTR10 LTR ERVK 1 390 0 7 965 890 182 11 28 chr13 49897670 49897851 -70386461 - RMER4B LTR ERVK -295 290 113 7 965 1503 60 22 0 chr13 49898621 49898805 -70385507 + B2_Mm2 SINE B2 1 188 -7 7 965 1170 88 0 0 chr13 49898805 49898952 -70385360 + B1_Mus1 SINE Alu 1 148 0 7 965 1128 291 72 43 chr13 49899129 49899890 -70384422 - L1_Mur3 LINE L1 -190 5690 4908 7 965 786 225 35 0 chr13 49899914 49900087 -70384225 + RLTR31_Mm LTR ERVK 1 179 -382 7 965 1680 137 69 29 chr13 49901362 49901818 -70382494 + RLTR31_Mm LTR ERVK 145 692 0 7 965 1391 187 148 163 chr13 49903012 49903478 -70380834 + MT2A LTR ERVL 1 459 -74 7 965 375 23 0 0 chr13 49903478 49903522 -70380790 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 965 10130 136 4 6 chr13 49903687 49905551 -70378761 - Lx2 LINE L1 -944 6053 4185 7 965 613 110 0 32 chr13 49905552 49905646 -70378666 + 4.5SRNA scRNA scRNA 4 94 0 7 965 759 209 0 30 chr13 49905652 49905820 -70378492 - L1_Mur2 LINE L1 -612 5265 5103 7 965 450 139 243 74 chr13 49905822 49905970 -70378342 - B2_Mm2 SINE B2 0 195 23 7 965 3094 39 0 0 chr13 49906015 49906370 -70377942 + IAPEY2_LTR LTR ERVK 1 355 -2 7 965 1132 115 28 28 chr13 49906370 49906538 -70377774 - B2_Mm1t SINE B2 -24 169 1 7 965 3158 142 9 4 chr13 49906547 49907071 -70377241 - L1_Mur2 LINE L1 -762 5115 4589 7 965 1302 188 44 18 chr13 49907126 49907640 -70376672 - L1_Mur2 LINE L1 -4381 1496 907 7 965 567 212 101 14 chr13 49907830 49907969 -70376343 - RCHARR1 DNA MER1_type -189 785 635 7 965 1130 172 108 0 chr13 49907993 49908196 -70376116 + URR1A DNA MER1_type 1 225 -1 7 965 862 184 12 31 chr13 49908505 49908668 -70375644 + MTB_Mm LTR MaLR 2 161 -246 7 965 478 255 194 19 chr13 49908664 49908824 -70375488 + B3 SINE B2 29 216 0 7 965 194 62 31 0 chr13 49908852 49908884 -70375428 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 7 965 314 206 14 0 chr13 49909139 49909212 -70375100 + HAL1 LINE L1 971 1044 -1463 7 965 237 374 20 20 chr13 49909970 49910071 -70374241 + MLT1K LTR MaLR 145 245 -350 7 965 262 263 0 0 chr13 49910437 49910494 -70373818 + CT-rich Low_complexity Low_complexity 4 60 0 7 965 597 289 120 54 chr13 49910629 49911328 -70372984 - L1M2 LINE L1 -2272 3871 3127 7 965 870 10 0 0 chr13 49911345 49911444 -70372868 + (TTC)n Simple_repeat Simple_repeat 2 100 0 7 965 450 0 0 0 chr13 49911447 49911497 -70372815 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 7 965 1122 53 0 0 chr13 49911497 49911630 -70372682 - B1_Mm SINE Alu -13 134 2 7 965 3952 238 111 88 chr13 49911900 49912371 -70371941 - Lx5 LINE L1 0 7050 6549 7 965 2283 130 9 0 chr13 49912371 49912695 -70371617 - ORR1A2 LTR MaLR 0 327 1 8 965 3952 203 113 62 chr13 49912695 49913723 -70370589 - Lx5 LINE L1 -502 6548 5483 7 965 1539 299 138 43 chr13 49913740 49915507 -70368805 - Lx8 LINE L1 -220 7253 5277 8 965 1026 257 83 54 chr13 49915603 49915953 -70368359 + ORR1D2 LTR MaLR 11 370 0 8 965 187 349 60 12 chr13 49922101 49922185 -70362127 - MIRb SINE MIR -81 187 100 8 965 243 270 40 13 chr13 49923177 49923252 -70361060 + ID4_ SINE ID 2 78 -5 8 965 1912 52 0 0 chr13 49923439 49923671 -70360641 + L1Md_A LINE L1 6351 6582 0 8 965 295 299 120 60 chr13 49926425 49926642 -70357670 + MLT1A0 LTR MaLR 97 326 -39 8 965 324 143 0 0 chr13 49927216 49927272 -70357040 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 965 508 319 29 14 chr13 49927288 49927498 -70356814 - ID_B1 SINE B4 -8 216 4 8 965 8338 50 5 1 chr13 49927511 49928531 -70355781 - L1Md_F2 LINE L1 -4 6578 5584 8 965 21 0 0 0 chr13 49928859 49928880 -70355432 + AT_rich Low_complexity Low_complexity 1 21 0 8 965 234 263 40 0 chr13 49929491 49929567 -70354745 + MTEb LTR MaLR 278 356 -23 8 965 7012 122 20 17 chr13 49930593 49930608 -70353704 - Lx LINE L1 0 6654 6640 8 965 1062 109 0 13 chr13 49930608 49930757 -70353555 - B1_Mus1 SINE Alu 0 148 2 8 965 25319 139 27 14 chr13 49930757 49933067 -70351245 - Lx LINE L1 -15 6639 4289 8 965 1164 89 0 0 chr13 49933067 49933213 -70351099 - B1_Mm SINE Alu 0 147 2 8 965 25319 145 38 10 chr13 49933213 49936980 -70347332 - Lx LINE L1 -1595 4288 422 8 965 452 285 81 40 chr13 49936991 49937214 -70347098 - L1M2 LINE L1 -2971 3172 2941 8 966 200 163 0 44 chr13 49940762 49940807 -70343505 + GA-rich Low_complexity Low_complexity 4 46 0 8 966 707 144 0 8 chr13 49941931 49942057 -70342255 + CT-rich Low_complexity Low_complexity 2 126 0 8 966 324 0 0 0 chr13 49942065 49942101 -70342211 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 8 966 225 289 0 0 chr13 49942647 49942692 -70341620 + B3A SINE B2 36 80 -118 8 966 817 242 110 0 chr13 49942850 49943077 -70341235 + RMER15-int LTR ERVL 889 1140 -3859 8 966 272 327 99 7 chr13 49944819 49944970 -70339342 - MTC LTR MaLR -256 165 1 8 966 362 261 11 22 chr13 49945247 49945337 -70338975 - PB1D7 SINE Alu -5 115 27 8 966 357 325 8 31 chr13 49945422 49945552 -70338760 + RSINE1 SINE B4 35 161 -4 8 966 263 269 96 11 chr13 49946370 49946464 -70337848 - ID_B1 SINE B4 -121 103 2 8 966 251 289 97 46 chr13 49946467 49946663 -70337649 + MLT1C LTR MaLR 23 228 -239 8 966 371 286 8 85 chr13 49947196 49947326 -70336986 + B4A SINE B4 173 292 0 8 966 264 272 96 0 chr13 49947619 49947744 -70336568 - L1M4c LINE L1 -4164 2220 2084 8 966 2468 71 0 0 chr13 49950792 49951130 -70333182 - ORR1A1 LTR MaLR -8 338 1 8 966 979 117 0 12 chr13 49951135 49951299 -70333013 + (TTC)n Simple_repeat Simple_repeat 2 163 0 8 966 306 0 0 0 chr13 49951300 49951334 -70332978 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 8 966 430 76 587 0 chr13 49951334 49951426 -70332886 - B1_Mus1 SINE Alu -1 147 2 8 966 950 286 94 12 chr13 49952120 49952523 -70331789 + RMER20A LTR ERVK 25 460 -56 8 966 387 0 0 0 chr13 49953127 49953170 -70331142 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 966 264 91 0 0 chr13 49953171 49953215 -70331097 + (GA)n Simple_repeat Simple_repeat 2 45 0 8 966 1529 248 100 9 chr13 49958714 49959162 -70325150 - RMER4B LTR ERVK 0 585 97 8 966 318 50 0 0 chr13 49959172 49959212 -70325100 + (TG)n Simple_repeat Simple_repeat 2 41 0 8 966 1410 280 75 47 chr13 49959776 49960429 -70323883 - RMER19A LTR ERVK 0 611 9 8 966 7165 81 28 2 chr13 49960747 49961772 -70322540 - L1_Mus2 LINE L1 -1 6565 5519 8 966 2410 148 17 74 chr13 49961773 49962527 -70321785 - L1VL4 LINE L1 -2488 1329 628 8 966 409 269 15 15 chr13 49962528 49962664 -70321648 - L1VL4 LINE L1 -5806 713 578 8 966 379 254 19 145 chr13 49962745 49962904 -70321408 - L1VL2 LINE L1 -6065 357 177 8 966 679 277 143 27 chr13 49963075 49963487 -70320825 - L1_Mur3 LINE L1 -190 5690 5231 8 966 1167 233 109 3 chr13 49963822 49964115 -70320197 - Lx5 LINE L1 0 7050 6727 8 966 3822 156 16 9 chr13 49964111 49964848 -70319464 - L1_Mur1 LINE L1 -2122 3764 3023 8 966 1595 117 119 10 chr13 49964851 49965162 -70319150 - IAPLTR4 LTR ERVK 0 345 1 8 966 6261 248 48 39 chr13 49965162 49967693 -70316619 - IAPLTR3-int LTR ERVK -351 7329 3462 8 966 833 96 35 49 chr13 49967798 49967941 -70316371 - MMERVK10C-int LTR ERVK -2911 4670 4530 8 966 505 184 12 35 chr13 49967953 49968078 -70316234 - MMERVK10C-int LTR ERVK -2380 2464 2357 8 966 6574 112 72 7 chr13 49968083 49969432 -70314880 - ETnERV3-int LTR ERVK -3135 4271 2732 8 966 322 267 0 55 chr13 49969441 49969532 -70314780 - ETnERV3-int LTR ERVK -4867 2539 2454 8 966 460 197 102 8 chr13 49969543 49969661 -70314651 - ETnERV3-int LTR ERVK -5557 1849 1721 8 966 1339 219 103 59 chr13 49969663 49970153 -70314159 - ETnERV3-int LTR ERVK -4783 623 237 8 966 329 183 0 115 chr13 49970256 49970355 -70313957 - MMERVK10C-int LTR ERVK -6629 952 869 8 966 11956 40 17 1 chr13 49970355 49971773 -70312539 - IAPLTR4_I LTR ERVK 0 1470 30 8 966 1076 181 0 31 chr13 49971777 49972005 -70312307 - MusHAL1 LINE L1 -893 1819 1599 8 966 1168 81 6 0 chr13 49971998 49972159 -70312153 - L1_Mur1 LINE L1 -3280 2606 2445 8 966 279 0 0 0 chr13 49975420 49975451 -70308861 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 966 425 210 7 0 chr13 49975924 49976067 -70308245 + (TG)n Simple_repeat Simple_repeat 2 145 0 8 966 279 0 0 0 chr13 49976218 49976249 -70308063 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 966 198 103 0 0 chr13 49976256 49976285 -70308027 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 8 966 957 144 0 0 chr13 49976285 49976445 -70307867 + (TCC)n Simple_repeat Simple_repeat 3 162 0 8 966 24 0 0 0 chr13 49977192 49977216 -70307096 + AT_rich Low_complexity Low_complexity 1 24 0 8 966 356 235 77 95 chr13 49977475 49977644 -70306668 - ID_B1 SINE B4 -8 216 51 8 966 289 261 0 33 chr13 49977802 49977893 -70306419 + ID_B1 SINE B4 137 224 0 8 966 379 265 22 43 chr13 49977910 49978048 -70306264 + L1_Rod LINE L1 5502 5636 -211 8 966 286 273 44 57 chr13 49979500 49979659 -70304653 - L1M2 LINE L1 -2295 3848 3692 8 966 413 323 8 23 chr13 49979697 49979827 -70304485 - RSINE1 SINE B4 -29 136 9 8 966 338 255 103 19 chr13 49979827 49979983 -70304329 - L1_Mur3 LINE L1 -2239 3641 3473 8 966 420 20 0 0 chr13 49980035 49980084 -70304228 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 966 869 190 119 5 chr13 49981815 49982016 -70302296 - URR1A DNA MER1_type 0 226 3 8 966 209 194 70 20 chr13 49982605 49982705 -70301607 + (TA)n Simple_repeat Simple_repeat 1 105 0 8 966 575 143 0 16 chr13 49983442 49983563 -70300749 + CT-rich Low_complexity Low_complexity 4 122 0 8 966 25 0 0 0 chr13 49983995 49984020 -70300292 + AT_rich Low_complexity Low_complexity 1 25 0 8 966 243 234 16 0 chr13 49984306 49984370 -70299942 - L1M4b LINE L1 -4543 2791 2727 8 966 2666 214 35 38 chr13 49984838 49985645 -70298667 - RLTR22_Mur LTR ERVK -1044 804 1 8 966 1066 212 68 28 chr13 49988263 49988588 -70295724 + MurERV4_19-int LTR ERVK 5189 5526 -254 8 966 355 164 0 0 chr13 49988641 49988708 -70295604 + MurERV4_19-int LTR ERVK 5714 5780 0 8 966 2519 216 86 11 chr13 49988734 49989389 -70294923 + RMER19B LTR ERVK 7 710 -192 8 966 234 170 0 0 chr13 49989388 49989435 -70294877 + RMER19B LTR ERVK 843 889 -13 8 966 2437 153 27 21 chr13 49989442 49989916 -70294396 - L1_Mur2 LINE L1 -1583 4294 3818 8 966 266 50 25 0 chr13 49990576 49990616 -70293696 + (CA)n Simple_repeat Simple_repeat 1 41 0 8 966 3693 49 4 9 chr13 49991478 49991933 -70292379 + L1Md_F2 LINE L1 6130 6582 0 8 966 628 181 9 0 chr13 49991942 49992058 -70292254 + B3 SINE B2 1 117 -99 8 966 1656 206 104 13 chr13 49992126 49992579 -70291733 - RLTR16 LTR ERVK -11 494 1 8 966 1441 208 148 65 chr13 49999183 49999677 -70284635 - RMER4B LTR ERVK -21 564 30 8 966 2720 88 36 126 chr13 50000228 50000750 -70283562 + IAPLTR2_Mm LTR ERVK 1 475 0 1 966 359 82 82 0 chr13 50000776 50000849 -70283463 + IAPEz-int LTR ERVK 3 81 -1906 1 966 1267 127 43 67 chr13 50000874 50001151 -70283161 + IAPEz-int LTR ERVK 10 258 -7323 1 966 228 250 0 0 chr13 50001154 50001198 -70283114 + RLTR27 LTR ERVK 232 275 -34 2 966 3836 69 2 18 chr13 50001198 50001701 -70282611 + IAPEz-int LTR ERVK 168 662 -5819 1 966 2216 75 0 0 chr13 50001701 50001979 -70282333 + IAPEz-int LTR ERVK 1359 1636 -4845 1 966 4642 41 2 24 chr13 50001978 50002551 -70281761 + IAPEz-int LTR ERVK 5736 6295 -186 1 966 4836 118 7 1 chr13 50002945 50003651 -70280661 - Lx3_Mus LINE L1 -1 7008 6299 3 966 406 64 0 3 chr13 50003651 50003712 -70280600 + Lx3_Mus LINE L1 5863 5922 -1087 4 966 215 79 26 0 chr13 50003714 50003752 -70280560 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 966 2147 123 19 8 chr13 50003753 50004123 -70280189 + Lx3_Mus LINE L1 5907 6280 -729 4 966 568 295 171 13 chr13 50004187 50004585 -70279727 - L1_Mur3 LINE L1 -190 5690 5230 6 966 242 29 0 28 chr13 50004688 50004724 -70279588 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 7 966 940 297 65 3 chr13 50004894 50005188 -70279124 - Lx5 LINE L1 -11 7039 6728 8 966 5002 151 184 25 chr13 50005183 50006322 -70277990 - L1_Mur1 LINE L1 -2120 3766 2448 9 966 555 53 0 0 chr13 50006811 50006886 -70277426 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 966 393 294 16 8 chr13 50007703 50007830 -70276482 - RSINE1 SINE B4 -29 136 9 1 966 412 289 54 22 chr13 50007837 50008060 -70276252 - L1M4 LINE L1 -2472 3674 3445 1 966 470 108 12 0 chr13 50008180 50008263 -70276049 + (TCCC)n Simple_repeat Simple_repeat 3 86 0 1 966 1027 132 60 11 chr13 50008273 50008457 -70275855 - B2_Mm2 SINE B2 -1 194 2 1 966 7607 78 6 7 chr13 50008519 50009679 -70274633 - L1Md_F2 LINE L1 0 6582 5423 1 966 521 298 35 23 chr13 50009971 50010229 -70274083 - RCHARR1 DNA MER1_type -1 973 713 1 966 423 0 0 0 chr13 50010733 50010780 -70273532 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 966 5811 18 0 0 chr13 50012715 50013381 -70270931 - L1Md_T LINE L1 -1511 4372 3707 1 966 10478 27 0 0 chr13 50013370 50014574 -70269738 + L1Md_T LINE L1 4383 5586 -297 1 966 8668 30 0 0 chr13 50014574 50015570 -70268742 + L1Md_T LINE L1 5587 6582 0 1 966 529 244 126 35 chr13 50015909 50016083 -70268229 + MTE2b LTR MaLR 1 190 -189 1 966 378 191 34 45 chr13 50016083 50016171 -70268141 + MTE2b LTR MaLR 293 379 0 1 966 364 301 44 9 chr13 50016340 50016454 -70267858 - B4A SINE B4 -174 118 1 2 966 195 42 0 0 chr13 50016683 50016707 -70267605 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2 966 1386 161 9 0 chr13 50017617 50017840 -70266472 - URR1B DNA MER1_type 0 225 1 2 966 630 213 139 23 chr13 50018128 50018216 -70266096 + RLTR20A2 LTR ERVK 1 102 -432 2 966 234 0 0 0 chr13 50018216 50018242 -70266070 + (CAAT)n Simple_repeat Simple_repeat 2 27 0 2 966 630 228 151 18 chr13 50018242 50018404 -70265908 + RLTR20A2 LTR ERVK 103 283 -285 2 966 647 218 0 71 chr13 50018395 50018454 -70265858 + RLTR20A2 LTR ERVK 423 476 -102 2 966 450 0 0 0 chr13 50018454 50018504 -70265808 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 966 647 218 0 71 chr13 50018504 50018612 -70265700 + RLTR20A2 LTR ERVK 477 578 0 2 966 2752 19 25 0 chr13 50019993 50020307 -70264005 + RLTRETN_Mm LTR ERVK 1 322 0 2 966 42451 26 1 4 chr13 50020307 50025166 -70259146 + MMETn-int LTR ERVK 1 4844 0 2 966 2764 16 25 0 chr13 50025166 50025480 -70258832 + RLTRETN_Mm LTR ERVK 1 322 0 2 966 267 203 0 0 chr13 50025824 50025888 -70258424 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 966 283 316 52 10 chr13 50026240 50026336 -70257976 + HAL1 LINE L1 598 697 -1810 2 966 310 283 0 43 chr13 50026444 50026545 -70257767 + ID4 SINE ID 3 96 -56 2 966 482 329 68 35 chr13 50026602 50027179 -70257133 + HAL1 LINE L1 1034 1629 -878 2 966 348 194 0 31 chr13 50027497 50027561 -70256751 + ID4 SINE ID 11 72 -11 3 966 284 292 176 7 chr13 50028847 50028995 -70255317 + MLT1A0 LTR MaLR 9 181 -184 3 966 206 318 34 60 chr13 50029183 50029300 -70255012 - MIRb SINE MIR -68 200 87 3 966 8258 50 0 2 chr13 50029806 50030943 -70253369 - L1Md_F2 LINE L1 0 6582 5448 3 966 1444 85 0 5 chr13 50031219 50031409 -70252903 + B2_Mm2 SINE B2 3 191 -4 3 966 18102 42 1 151 chr13 50032091 50034701 -70249611 - L1Md_F2 LINE L1 -3 6579 4855 3 966 8152 54 2 0 chr13 50034701 50035695 -70248617 + L1Md_F2 LINE L1 5587 6582 0 3 966 18102 42 1 243 chr13 50035695 50037559 -70246753 - L1Md_F2 LINE L1 -1029 4854 3021 3 966 660 203 8 0 chr13 50038270 50038388 -70245924 - Lx6 LINE L1 -129 7331 7213 3 966 307 224 11 66 chr13 50038388 50038479 -70245833 + B4A SINE B4 123 208 -84 3 966 2697 171 71 16 chr13 50038502 50039066 -70245246 + RLTR17 LTR ERVK 98 692 0 3 966 263 198 46 211 chr13 50039066 50039174 -70245138 + B4A SINE B4 203 292 0 3 966 988 195 120 0 chr13 50040897 50041097 -70243215 + URR1A DNA MER1_type 1 224 -2 4 966 21 57 0 0 chr13 50041130 50041165 -70243147 + AT_rich Low_complexity Low_complexity 1 35 0 4 966 556 222 94 22 chr13 50041165 50041303 -70243009 + B1F SINE Alu 1 148 -1 4 966 290 320 232 4 chr13 50041847 50042123 -70242189 + MLT1D LTR MaLR 1 339 -166 4 966 1631 197 141 5 chr13 50042943 50043311 -70241001 - MTC LTR MaLR 0 421 4 4 966 297 0 0 0 chr13 50044460 50044493 -70239819 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 966 243 326 34 23 chr13 50045630 50045718 -70238594 + MIR SINE MIR 61 149 -59 4 966 1138 270 114 14 chr13 50046959 50047327 -70236985 - MTD LTR MaLR -14 405 1 4 966 356 0 0 22 chr13 50047892 50047937 -70236375 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 4 966 513 0 0 0 chr13 50048144 50048201 -70236111 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 966 258 311 70 100 chr13 50048608 50048808 -70235504 + MER77 LTR ERVL 217 410 -197 5 966 285 254 0 29 chr13 50049170 50049239 -70235073 - ID2 SINE ID -16 67 1 5 966 263 231 90 25 chr13 50049247 50049347 -70234965 - PB1 SINE Alu -7 120 17 5 966 780 322 7 26 chr13 50050836 50051107 -70233205 - B4A SINE B4 -18 274 9 5 966 241 297 0 0 chr13 50051635 50051701 -70232611 - ORR1E LTR MaLR -233 126 61 5 966 1170 168 0 0 chr13 50051701 50051897 -70232415 - RMER4B LTR ERVK 0 585 390 5 966 441 145 103 51 chr13 50051898 50052016 -70232296 - RMER4B LTR ERVK -454 131 1 5 966 2598 191 34 16 chr13 50052827 50053321 -70230991 - Lx5 LINE L1 0 7050 6548 5 966 617 188 54 0 chr13 50054891 50055003 -70229309 - B1_Mur1 SINE Alu 0 149 32 5 966 211 184 20 20 chr13 50055018 50055068 -70229244 + GA-rich Low_complexity Low_complexity 3 52 0 5 966 483 229 83 88 chr13 50055073 50055265 -70229047 + B3A SINE B2 2 192 -3 5 966 590 227 262 46 chr13 50055328 50055568 -70228744 + B4A SINE B4 1 292 0 6 966 500 286 56 15 chr13 50056338 50056533 -70227779 + B3 SINE B2 1 203 -13 6 966 288 292 0 0 chr13 50056755 50056827 -70227485 - ID4_ SINE ID -11 72 1 6 966 303 223 60 11 chr13 50058297 50058398 -70225914 + L1MA5A LINE L1 5789 5894 -403 6 966 1091 331 76 31 chr13 50058708 50059155 -70225157 + MER44D DNA MER2_type 28 505 -200 6 966 889 158 0 20 chr13 50059155 50059304 -70225008 - B1_Mus2 SINE Alu 0 147 2 6 966 1091 331 76 31 chr13 50059304 50059504 -70224808 + MER44D DNA MER2_type 506 704 -1 6 966 425 234 29 53 chr13 50059638 50059809 -70224503 + MER44D DNA MER2_type 487 653 -52 6 966 217 257 18 73 chr13 50061052 50061161 -70223151 + MIR SINE MIR 131 233 -29 6 966 420 161 0 0 chr13 50061192 50061273 -70223039 + (TG)n Simple_repeat Simple_repeat 1 81 0 6 966 395 0 40 0 chr13 50063096 50063146 -70221166 + (TATAA)n Simple_repeat Simple_repeat 1 52 0 6 966 2131 149 50 14 chr13 50063333 50063694 -70220618 - ORR1C1 LTR MaLR -4 374 1 6 966 706 207 27 14 chr13 50064146 50064293 -70220019 - B1_Mur4 SINE Alu -1 149 1 7 966 623 246 39 33 chr13 50064331 50064512 -70219800 - B3A SINE B2 -12 186 5 7 966 964 107 0 0 chr13 50064841 50064976 -70219336 + B1_Mus1 SINE Alu 1 135 -13 7 966 351 0 0 0 chr13 50064976 50065015 -70219297 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 7 966 21 0 0 0 chr13 50065692 50065713 -70218599 + AT_rich Low_complexity Low_complexity 1 21 0 7 966 537 64 0 0 chr13 50066494 50066572 -70217740 + (TG)n Simple_repeat Simple_repeat 1 78 0 7 966 333 0 0 0 chr13 50067524 50067561 -70216751 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 967 1561 294 77 11 chr13 50073767 50074300 -70210012 + Lx9 LINE L1 6392 6959 -685 7 967 839 315 24 7 chr13 50074305 50074596 -70209716 + Lx9 LINE L1 7178 7473 -171 7 967 376 238 92 77 chr13 50075135 50075331 -70208981 + L1MA6 LINE L1 5811 6009 -291 7 967 210 105 0 0 chr13 50075521 50075559 -70208753 + (CAAAC)n Simple_repeat Simple_repeat 5 42 0 7 967 196 153 75 100 chr13 50075693 50075773 -70208539 + MIR3 SINE MIR 102 179 -29 8 967 759 154 44 13 chr13 50075836 50075994 -70208318 - URR1A DNA MER1_type -20 206 44 8 967 227 223 154 91 chr13 50076039 50076182 -70208130 + RMER15 LTR ERVL 32 183 -392 8 967 234 322 22 11 chr13 50076181 50076272 -70208040 + RMER15 LTR ERVL 464 555 -20 8 967 4460 16 2 0 chr13 50076277 50076769 -70207543 - MT2_Mm LTR ERVL 0 493 1 8 967 321 0 0 0 chr13 50076769 50076807 -70207505 - MERVL-int LTR ERVL 0 5485 5448 8 967 362 167 46 35 chr13 50076807 50076894 -70207418 - ORR1A3-int LTR MaLR -1323 640 553 8 967 41427 16 14 0 chr13 50076894 50082182 -70202130 - MERVL-int LTR ERVL -125 5360 1 8 967 4476 14 2 0 chr13 50082182 50082674 -70201638 - MT2_Mm LTR ERVL 0 493 1 8 967 2283 184 101 13 chr13 50084619 50085142 -70199170 - RMER4B LTR ERVK -5 580 12 8 967 788 210 80 0 chr13 50085698 50085898 -70198414 - RMER19A LTR ERVK 0 737 522 8 967 1635 189 36 3 chr13 50085926 50086286 -70198026 + MurERV4_19-int LTR ERVK 4888 5259 -521 8 967 548 268 71 6 chr13 50086288 50086457 -70197855 + MurERV4_19-int LTR ERVK 5165 5344 -436 8 967 435 52 0 0 chr13 50086478 50086536 -70197776 + (TG)n Simple_repeat Simple_repeat 2 59 0 8 967 3162 212 22 16 chr13 50086581 50087507 -70196805 - L1_Mur2 LINE L1 -3858 2019 1092 9 967 494 317 11 11 chr13 50087512 50087694 -70196618 - L1M2 LINE L1 -2032 4111 3930 9 967 425 307 65 35 chr13 50087697 50087866 -70196446 - B3A SINE B2 -15 183 10 9 967 430 268 13 74 chr13 50087883 50088032 -70196280 - B1_Mur1 SINE Alu -8 141 2 9 967 494 322 52 81 chr13 50088059 50088223 -70196089 - L1M2 LINE L1 -2741 3402 3244 9 967 1426 81 11 0 chr13 50088223 50088409 -70195903 - B2_Mm1t SINE B2 -4 189 2 9 967 494 322 52 81 chr13 50088409 50089129 -70195183 - L1M2 LINE L1 -2900 3243 2544 9 967 1929 305 56 24 chr13 50089171 50089963 -70194349 - Lx6 LINE L1 -11 7449 6633 9 967 560 264 59 39 chr13 50090569 50090825 -70193487 - RCHARR1 DNA MER1_type -1 973 713 9 967 321 284 26 8 chr13 50094315 50094432 -70189880 - L1MA4 LINE L1 -368 5932 5814 9 967 756 0 0 0 chr13 50094665 50094749 -70189563 + (TTC)n Simple_repeat Simple_repeat 2 85 0 9 967 936 78 108 0 chr13 50094753 50094882 -70189430 - B1_Mus1 SINE Alu -5 143 1 9 967 551 14 14 0 chr13 50094947 50095021 -70189291 - B1_Mus2 SINE Alu 0 147 73 1 967 304 158 22 89 chr13 50095021 50095036 -70189276 - ID_B1 SINE B4 0 223 141 1 967 624 61 0 30 chr13 50097299 50097400 -70186912 + (TCC)n Simple_repeat Simple_repeat 2 99 0 1 967 398 359 8 0 chr13 50098030 50098158 -70186154 - RSINE1 SINE B4 -14 151 23 1 967 342 257 122 29 chr13 50098178 50098416 -70185896 - L1MD LINE L1 -2470 3676 3385 1 967 219 200 30 30 chr13 50100217 50100284 -70184028 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 967 236 261 0 0 chr13 50100481 50100546 -70183766 + L1M5 LINE L1 4279 4343 -1803 1 967 1016 175 33 0 chr13 50100924 50101107 -70183205 + B2_Mm2 SINE B2 1 189 -6 1 967 588 197 8 0 chr13 50101322 50101439 -70182873 + B3 SINE B2 1 118 -98 1 967 3998 168 36 22 chr13 50103927 50104754 -70179558 - L1_Mur1 LINE L1 -1643 4243 3405 1 967 1719 113 14 0 chr13 50104755 50105037 -70179275 - MusHAL1 LINE L1 -990 1722 1437 1 967 250 282 80 58 chr13 50106312 50106500 -70177812 + RLTR15 LTR ERVK 51 242 -117 1 967 222 219 35 47 chr13 50108816 50108902 -70175410 + CT-rich Low_complexity Low_complexity 5 89 0 1 967 450 94 0 0 chr13 50108931 50108995 -70175317 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 967 234 338 0 25 chr13 50109001 50109080 -70175232 - B4A SINE B4 -2 290 214 1 967 534 16 0 0 chr13 50109099 50109162 -70175150 + (TG)n Simple_repeat Simple_repeat 2 64 0 1 967 425 353 0 0 chr13 50109166 50109299 -70175013 - RSINE1 SINE B4 -31 134 2 1 967 633 213 52 0 chr13 50109306 50109442 -70174870 - B1_Mur1 SINE Alu -5 144 2 1 967 349 220 166 7 chr13 50109555 50109706 -70174606 + L1MC LINE L1 3577 3751 -2395 1 967 305 298 23 2 chr13 50109725 50109856 -70174456 + PB1D10 SINE Alu 13 149 0 1 967 42000 5 0 0 chr13 50110523 50117083 -70167229 - L1Md_A LINE L1 0 6582 23 1 967 241 206 43 14 chr13 50117692 50117761 -70166551 + RLTR13D3 LTR ERVK 979 1049 -65 1 967 609 124 26 0 chr13 50117833 50117946 -70166366 - URR1B DNA MER1_type 0 225 110 1 967 13421 175 28 27 chr13 50118326 50118954 -70165358 + L1_Mur2 LINE L1 863 1497 -4380 1 967 4542 50 2 2 chr13 50118954 50119510 -70164802 + L1Md_F2 LINE L1 6027 6582 0 1 967 13421 173 17 32 chr13 50119510 50120118 -70164194 + L1_Mur2 LINE L1 1498 2046 -3831 1 967 405 0 0 0 chr13 50120118 50120163 -70164149 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 967 13421 173 17 32 chr13 50120163 50121349 -70162963 + L1_Mur2 LINE L1 2047 3245 -2632 1 967 243 0 0 0 chr13 50121349 50121376 -70162936 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 967 13421 173 17 32 chr13 50121376 50122061 -70162251 + L1_Mur2 LINE L1 3246 3934 -1943 1 967 308 88 26 117 chr13 50122048 50122125 -70162187 + Lx4B LINE L1 6094 6163 -895 1 967 447 226 93 47 chr13 50122102 50122274 -70162038 + Lx4B LINE L1 6878 7057 -1 1 967 214 192 115 0 chr13 50122301 50122353 -70161959 + B1_Mur3 SINE Alu 79 136 -13 1 967 423 0 0 0 chr13 50123280 50123327 -70160985 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 967 270 56 0 0 chr13 50123333 50123369 -70160943 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 967 203 146 24 0 chr13 50123372 50123413 -70160899 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 1 967 349 143 0 0 chr13 50123741 50123797 -70160515 - L1M4c LINE L1 -4790 1594 1539 1 967 370 257 36 9 chr13 50123854 50123964 -70160348 + PB1D7 SINE Alu 5 117 -3 1 967 520 114 0 0 chr13 50124024 50124103 -70160209 - RLTR24 LTR ERV1 0 529 451 1 967 284 230 97 134 chr13 50124613 50124796 -70159516 + MER57C2 LTR ERV1 51 241 -170 1 967 1038 266 88 15 chr13 50130455 50130798 -70153514 + RMER20B LTR ERVK 25 392 -235 1 967 297 0 0 0 chr13 50131460 50131493 -70152819 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 967 1320 82 43 5 chr13 50132044 50132203 -70152109 + B2_Mm1t SINE B2 2 160 -33 1 967 329 0 24 0 chr13 50132203 50132244 -70152068 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1 967 1320 82 43 5 chr13 50132244 50132268 -70152044 + B2_Mm1t SINE B2 161 192 -1 1 967 39719 33 2 7 chr13 50132446 50138107 -70146205 + L1Md_T LINE L1 440 6069 -513 1 967 1080 76 19 0 chr13 50138107 50138264 -70146048 + L1Md_T LINE L1 6423 6582 0 1 967 452 205 36 0 chr13 50138428 50138540 -70145772 + B3 SINE B2 2 117 -99 1 967 236 219 108 15 chr13 50138570 50138635 -70145677 + L1M5 LINE L1 5231 5301 -845 1 967 3748 199 0 4 chr13 50139333 50140033 -70144279 - Lx LINE L1 -7 6647 5951 1 967 1134 88 0 0 chr13 50140287 50140434 -70143878 + B1_Mus2 SINE Alu 1 147 0 1 967 492 18 0 0 chr13 50145572 50145629 -70138683 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 967 273 327 103 27 chr13 50146776 50147163 -70137149 - L1M2 LINE L1 -551 5329 4910 1 967 387 0 0 0 chr13 50147526 50147569 -70136743 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 967 283 247 65 141 chr13 50147603 50147773 -70136539 + B4A SINE B4 65 221 -71 1 967 843 104 0 0 chr13 50147654 50147779 -70136533 + B1_Mus2 SINE Alu 23 147 0 1 967 500 124 0 33 chr13 50147779 50147871 -70136441 + A-rich Low_complexity Low_complexity 1 89 0 1 967 387 310 102 35 chr13 50154683 50155057 -70129255 - L1M2 LINE L1 -764 5379 4981 1 967 220 306 0 111 chr13 50155345 50155426 -70128886 + B1_Mus2 SINE Alu 12 83 -64 1 967 459 0 0 0 chr13 50155459 50155510 -70128802 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 967 214 299 0 15 chr13 50159286 50159354 -70124958 + CT-rich Low_complexity Low_complexity 5 71 0 1 967 309 269 49 24 chr13 50160797 50160961 -70123351 + L1M2 LINE L1 2984 3151 -2992 1 967 1096 197 235 7 chr13 50161099 50161279 -70123033 + ORR1D1 LTR MaLR 1 228 -146 1 967 213 39 0 0 chr13 50161279 50161305 -70123007 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 1 967 1096 197 235 7 chr13 50161305 50161426 -70122886 + ORR1D1 LTR MaLR 229 371 -3 1 967 473 268 9 0 chr13 50161552 50161664 -70122648 + B1_Mur2 SINE Alu 12 124 -25 1 967 292 298 314 51 chr13 50161987 50162281 -70122031 - ORR1E LTR MaLR -6 373 3 1 967 623 191 23 0 chr13 50165656 50165787 -70118525 - RMER4B LTR ERVK 0 585 452 1 967 252 28 108 27 chr13 50165787 50165824 -70118488 - L1Md_Gf LINE L1 -6416 106 67 1 967 387 0 0 0 chr13 50166806 50166849 -70117463 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 967 10554 184 79 40 chr13 50166955 50170501 -70113811 - Lx2B LINE L1 0 7000 3297 1 967 9268 124 7 9 chr13 50170495 50172825 -70111487 - L1_Mus3 LINE L1 -6 6632 4312 1 967 1101 160 127 22 chr13 50172822 50173097 -70111215 - MusHAL1 LINE L1 -617 2095 1792 1 967 38778 43 0 3 chr13 50173092 50179506 -70104806 - L1Md_T LINE L1 0 6585 92 1 967 815 219 29 19 chr13 50179503 50179712 -70104600 - Lx2B LINE L1 -2871 3006 2796 1 967 404 138 0 0 chr13 50179705 50179770 -70104542 - Lx2B LINE L1 -3281 2605 2541 1 967 216 0 0 0 chr13 50180079 50180103 -70104209 + (T)n Simple_repeat Simple_repeat 1 24 0 1 967 2722 72 3 0 chr13 50181853 50182198 -70102114 - ORR1A0 LTR MaLR 0 346 1 1 967 281 233 11 32 chr13 50182865 50182958 -70101354 - RMER4B LTR ERVK -5 580 490 1 967 4333 201 14 65 chr13 50182964 50183908 -70100404 - Lx2B LINE L1 -3509 2368 1490 1 967 189 0 0 0 chr13 50183908 50183929 -70100383 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 967 4333 207 28 31 chr13 50183929 50184323 -70099989 - Lx2B LINE L1 -4388 1489 1092 1 967 341 389 0 0 chr13 50184328 50184513 -70099799 - L1M2 LINE L1 -2032 4111 3927 1 967 429 273 71 65 chr13 50184520 50184704 -70099608 - B3A SINE B2 -11 187 3 1 967 377 250 27 93 chr13 50184705 50184855 -70099457 - B1_Mur1 SINE Alu 0 149 10 1 967 859 329 41 31 chr13 50184873 50185271 -70099041 - L1M2 LINE L1 -523 3391 2995 1 967 180 77 0 0 chr13 50185271 50185297 -70099015 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 967 859 320 45 26 chr13 50185297 50185634 -70098678 - L1M2 LINE L1 -3116 3027 2676 1 967 1197 159 18 0 chr13 50185660 50185886 -70098426 - Lx LINE L1 -7 6647 6418 1 967 432 0 0 0 chr13 50189050 50189098 -70095214 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 967 514 275 36 0 chr13 50189859 50189997 -70094315 - RSINE1 SINE B4 -12 153 11 1 967 316 241 47 8 chr13 50190004 50190118 -70094194 - L1MD LINE L1 -2471 3675 3554 1 967 217 179 29 29 chr13 50190423 50190492 -70093820 + T-rich Low_complexity Low_complexity 4 72 0 1 967 1174 68 0 0 chr13 50191915 50192062 -70092250 + B1_Mus1 SINE Alu 2 148 0 1 967 246 105 0 0 chr13 50192062 50192100 -70092212 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 967 307 237 206 0 chr13 50192315 50192412 -70091900 + B3 SINE B2 1 117 -99 1 967 1707 224 114 22 chr13 50198609 50199143 -70085169 - RMER4B LTR ERVK 0 585 3 1 967 1055 253 60 13 chr13 50199692 50200265 -70084047 - RMER19A LTR ERVK 0 737 94 1 968 630 287 102 63 chr13 50200699 50201163 -70083149 - L1_Mur3 LINE L1 -435 5754 5221 1 968 2217 229 41 12 chr13 50201473 50201981 -70082331 - Lx5 LINE L1 -8 7042 6520 1 968 1295 229 7 7 chr13 50201979 50202282 -70082030 - Lx5 LINE L1 -982 6068 5766 1 968 1734 182 56 0 chr13 50202300 50202624 -70081688 - Lx3B LINE L1 -5 6968 6627 1 968 1360 186 11 84 chr13 50202624 50202971 -70081341 + RLTRETN_Mm LTR ERVK 1 322 0 1 968 22392 117 25 29 chr13 50202982 50209318 -70074994 + MMETn-int LTR ERVK 8 7299 -107 1 968 1361 159 20 87 chr13 50209318 50209663 -70074649 + RLTRETN_Mm LTR ERVK 1 322 0 1 968 2839 147 18 0 chr13 50209663 50210113 -70074199 - Lx3B LINE L1 -341 6632 6175 1 968 10471 138 71 15 chr13 50210114 50211337 -70072975 - Lx3B LINE L1 -1046 5963 4657 1 968 3838 40 7 0 chr13 50211337 50211793 -70072519 + L1Md_F3 LINE L1 6125 6583 -1 1 968 10471 139 20 20 chr13 50211793 50212556 -70071756 - Lx3B LINE L1 -1230 4656 3913 1 968 388 265 149 21 chr13 50212556 50212791 -70071521 - RLTR10A LTR ERVK 0 411 147 1 968 1578 163 52 10 chr13 50212847 50213157 -70071155 - Lx3B LINE L1 -1968 3918 3596 1 968 36128 36 1 0 chr13 50214697 50220791 -70063521 + L1Md_T LINE L1 1 5589 -297 1 968 9052 9 0 2 chr13 50220791 50221789 -70062523 + L1Md_T LINE L1 5590 6585 0 1 968 256 238 16 0 chr13 50222160 50222223 -70062089 + CT-rich Low_complexity Low_complexity 3 66 0 1 968 2815 142 131 18 chr13 50222644 50223477 -70060835 + RLTR13D3 LTR ERVK 1 1114 0 1 968 41238 16 3 6 chr13 50224431 50230803 -70053509 - L1Md_A LINE L1 -1 6581 233 1 968 1350 214 90 9 chr13 50230803 50231147 -70053165 + ORR1B1 LTR MaLR 23 394 0 1 968 921 121 35 21 chr13 50233016 50233160 -70051152 - B1_Mus2 SINE Alu -1 146 1 1 968 455 316 22 0 chr13 50233395 50233531 -70050781 - RSINE1 SINE B4 -12 153 15 1 968 485 254 184 32 chr13 50233543 50233820 -70050492 - L1M2 LINE L1 -2472 3671 3323 1 968 1161 125 10 20 chr13 50233868 50234064 -70050248 - B2_Mm2 SINE B2 0 195 2 1 968 28 86 0 0 chr13 50234286 50234356 -70049956 + AT_rich Low_complexity Low_complexity 1 70 0 2 968 14133 92 14 14 chr13 50234893 50237665 -70046647 - L1VL2 LINE L1 -635 2980 213 2 968 228 86 0 0 chr13 50240858 50240893 -70043419 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 968 872 184 114 5 chr13 50241943 50242145 -70042167 - URR1A DNA MER1_type 0 226 3 2 968 311 316 0 7 chr13 50242727 50242867 -70041445 + (TATATG)n Simple_repeat Simple_repeat 4 142 0 2 968 4043 108 37 10 chr13 50243453 50244072 -70040240 - L1_Mus4 LINE L1 0 6636 6001 2 968 7639 50 2 13 chr13 50244073 50245024 -70039288 - L1Md_F2 LINE L1 0 6582 5642 2 968 8583 32 1 0 chr13 50245213 50246372 -70037940 - L1Md_T LINE L1 0 6582 5423 2 968 306 324 76 24 chr13 50246664 50246914 -70037398 - RCHARR1 DNA MER1_type -1 973 711 2 968 312 27 0 0 chr13 50247453 50247490 -70036822 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 968 1020 97 14 0 chr13 50249416 50249561 -70034751 + B1_Mus1 SINE Alu 2 148 0 2 968 650 87 10 0 chr13 50251156 50251259 -70033053 + (TG)n Simple_repeat Simple_repeat 2 105 0 2 968 456 341 8 0 chr13 50252145 50252277 -70032035 - RSINE1 SINE B4 -14 151 19 2 968 353 256 95 29 chr13 50252297 50252520 -70031792 - L1MD LINE L1 -2470 3676 3445 2 968 234 0 0 0 chr13 50252801 50252827 -70031485 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2 968 234 194 0 46 chr13 50254355 50254420 -70029892 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 2 968 609 149 28 0 chr13 50255029 50255136 -70029176 + B1_Mm SINE Alu 1 110 -37 2 968 1079 141 27 5 chr13 50255200 50255386 -70028926 + B2_Mm2 SINE B2 1 190 -5 2 968 528 214 8 0 chr13 50255601 50255718 -70028594 + B3 SINE B2 1 118 -98 2 968 1643 220 112 24 chr13 50262411 50262947 -70021365 - RMER4B LTR ERVK 0 585 3 2 968 917 274 53 16 chr13 50263496 50264033 -70020279 - RMER19A LTR ERVK 0 737 132 2 968 3645 55 4 0 chr13 50264064 50264516 -70019796 - L1Md_F2 LINE L1 -19 6563 6110 2 968 2237 87 132 11 chr13 50264516 50264864 -70019448 + RLTR10 LTR ERVK 1 390 0 2 968 4754 87 20 46 chr13 50264864 50265576 -70018736 + RLTR10-int LTR ERVK 302 994 -993 2 968 1453 311 42 9 chr13 50265628 50266291 -70018021 + RLTR10-int LTR ERVK 738 1422 -5120 2 968 8654 188 41 30 chr13 50266312 50268741 -70015571 + RLTR10-int LTR ERVK 986 5243 -1299 2 968 1890 95 136 6 chr13 50268745 50269083 -70015229 + RLTR10 LTR ERVK 6 387 -3 2 968 29226 67 6 4 chr13 50269088 50273183 -70011129 - L1Md_F2 LINE L1 -467 6115 2011 2 968 283 161 18 0 chr13 50273183 50273239 -70011073 - RMER19A LTR ERVK -775 127 71 2 968 562 311 125 30 chr13 50273683 50274148 -70010164 - L1_Mur3 LINE L1 -435 5754 5221 2 968 2072 231 57 24 chr13 50274457 50274963 -70009349 - Lx5 LINE L1 -8 7042 6520 2 968 1314 223 7 0 chr13 50274961 50275248 -70009064 - Lx5 LINE L1 -982 6068 5780 2 968 7936 149 21 11 chr13 50275280 50276976 -70007336 - Lx3B LINE L1 -5 6968 5257 2 968 670 91 0 0 chr13 50276976 50277064 -70007248 + MERVL-int LTR ERVL 3529 3616 -1869 2 968 243 146 0 0 chr13 50277069 50277110 -70007202 + (CCCCCT)n Simple_repeat Simple_repeat 2 42 0 2 968 1687 148 62 12 chr13 50278581 50278902 -70005410 + ORR1B2 LTR MaLR 2 338 -29 2 968 520 114 0 0 chr13 50281079 50281158 -70003154 + RLTR24 LTR ERV1 451 529 0 2 968 320 290 37 9 chr13 50281218 50281326 -70002986 - PB1D7 SINE Alu -3 117 7 2 968 362 125 0 0 chr13 50281374 50281430 -70002882 + L1M4c LINE L1 1539 1594 -4790 2 968 198 143 0 0 chr13 50281766 50281801 -70002511 + (CATATA)n Simple_repeat Simple_repeat 3 37 0 2 968 423 0 0 0 chr13 50281802 50281849 -70002463 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 968 214 192 115 0 chr13 50282773 50282825 -70001487 - B1_Mur3 SINE Alu -13 136 79 2 968 2904 217 37 26 chr13 50282852 50283716 -70000596 - Lx4B LINE L1 0 6976 6089 2 968 2006 180 35 16 chr13 50283686 50284121 -70000191 - L1_Mur2 LINE L1 -1928 3949 3507 2 968 6598 145 54 4 chr13 50284131 50285128 -69999184 + Lx3C LINE L1 4742 5844 -1132 2 968 4830 55 2 2 chr13 50285128 50285715 -69998597 - LTRIS_Mus LTR ERV1 0 587 1 2 968 6598 174 87 6 chr13 50285715 50285891 -69998421 + Lx3C LINE L1 5845 6040 -936 2 968 657 0 0 0 chr13 50285891 50285964 -69998348 + (GA)n Simple_repeat Simple_repeat 2 74 0 2 968 6598 174 87 6 chr13 50285964 50286868 -69997444 + Lx3C LINE L1 6041 6966 -10 2 968 1283 215 18 7 chr13 50286900 50287186 -69997126 + Lx5 LINE L1 5780 6068 -982 2 968 1907 245 59 35 chr13 50287184 50287695 -69996617 + Lx5 LINE L1 6520 7042 -8 2 968 315 294 176 25 chr13 50288001 50288280 -69996032 + L1_Mur3 LINE L1 5221 5541 -339 2 968 1069 258 159 5 chr13 50288310 50288743 -69995569 + RMER19A LTR ERVK 238 737 0 2 968 1742 212 112 24 chr13 50289292 50289828 -69994484 + RMER4B LTR ERVK 3 585 0 2 968 537 222 8 0 chr13 50296819 50296936 -69987376 - B3 SINE B2 -98 118 1 2 968 1028 153 38 5 chr13 50297152 50297336 -69986976 - B2_Mm2 SINE B2 -5 190 1 2 968 600 149 28 0 chr13 50297398 50297505 -69986807 - B1_Mm SINE Alu -37 110 1 2 968 234 194 0 46 chr13 50298111 50298176 -69986136 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 2 968 725 197 27 13 chr13 50298829 50299015 -69985297 - Lx5 LINE L1 -619 5963 5780 2 968 2644 154 49 23 chr13 50299047 50299533 -69984779 - Lx3B LINE L1 -5 6968 6470 2 968 12973 148 27 19 chr13 50299533 50302158 -69982154 - Lx3B LINE L1 -791 6182 3539 2 968 3396 177 23 30 chr13 50303717 50304416 -69979896 - RMER16-int LTR ERVK -3861 1545 852 2 968 252 211 0 50 chr13 50304600 50304660 -69979652 + C-rich Low_complexity Low_complexity 6 62 0 2 968 2839 140 115 6 chr13 50304837 50305367 -69978945 - RLTR1D LTR ERV1 -16 589 2 2 968 436 284 138 57 chr13 50305535 50305868 -69978444 - RLTR9A LTR ERVK -8 360 1 2 968 351 0 0 0 chr13 50307193 50307232 -69977080 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 968 4964 25 0 0 chr13 50307519 50308086 -69976226 + L1Md_A LINE L1 6016 6582 0 2 968 521 286 84 59 chr13 50308909 50309195 -69975117 - RLTR16 LTR ERVK -207 298 6 2 968 368 40 20 0 chr13 50310854 50310904 -69973408 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 968 2137 132 0 3 chr13 50311280 50311613 -69972699 - Lx LINE L1 -3 6651 6320 2 968 545 222 8 0 chr13 50312080 50312197 -69972115 + B3 SINE B2 1 118 -98 2 968 1441 193 96 18 chr13 50312252 50312637 -69971675 - RLTR16 LTR ERVK 0 505 91 2 968 288 0 0 0 chr13 50313217 50313249 -69971063 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 968 884 170 119 10 chr13 50315199 50315401 -69968911 - URR1A DNA MER1_type 0 226 3 2 968 214 233 0 55 chr13 50315976 50316067 -69968245 + (TATATG)n Simple_repeat Simple_repeat 1 86 0 2 968 4105 57 62 9 chr13 50316241 50316773 -69967539 + LTRIS2 LTR ERV1 5 564 0 2 968 5040 97 34 12 chr13 50317182 50317926 -69966386 - L1_Mus4 LINE L1 0 6636 5877 2 968 256 254 54 20 chr13 50317926 50318086 -69966226 - RLTR13D3 LTR ERVK -65 1049 983 2 968 203 171 0 0 chr13 50318625 50318666 -69965646 + T-rich Low_complexity Low_complexity 1 41 0 2 968 7802 55 1 11 chr13 50318982 50320158 -69964154 - L1Md_F2 LINE L1 -1 6581 5423 2 968 441 290 59 28 chr13 50320450 50320705 -69963607 - RCHARR1 DNA MER1_type -1 973 711 2 968 807 21 0 0 chr13 50321206 50321303 -69963009 + (TG)n Simple_repeat Simple_repeat 2 98 0 2 968 306 307 53 43 chr13 50322099 50322307 -69962005 + RLTR15 LTR ERVK 33 242 -117 2 968 854 97 97 0 chr13 50323241 50323375 -69960937 + B1_Mus1 SINE Alu 2 148 0 2 968 360 125 0 0 chr13 50324971 50325035 -69959277 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 968 467 333 8 0 chr13 50325965 50326097 -69958215 - RSINE1 SINE B4 -14 151 19 2 968 366 271 97 32 chr13 50326118 50326335 -69957977 - L1M4 LINE L1 -2471 3675 3445 2 968 182 37 0 36 chr13 50326610 50326638 -69957674 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 2 968 433 71 29 0 chr13 50328166 50328236 -69956076 + (CA)n Simple_repeat Simple_repeat 2 73 0 2 968 407 285 77 0 chr13 50328845 50328869 -69955443 + B4 SINE B4 58 91 -201 2 968 719 136 0 0 chr13 50328869 50328979 -69955333 + B1_Mm SINE Alu 1 110 -37 2 968 1181 137 33 0 chr13 50329046 50329229 -69955083 + B2_Mm2 SINE B2 1 189 -6 2 968 538 214 8 0 chr13 50329439 50329556 -69954756 + B3 SINE B2 1 118 -98 2 969 2590 64 0 3 chr13 50332673 50333004 -69951308 - L1Md_F3 LINE L1 -2 6582 6253 2 969 431 241 51 36 chr13 50334293 50334431 -69949881 - RMER19A LTR ERVK -497 240 101 2 969 555 146 0 0 chr13 50335275 50335405 -69948907 + (TG)n Simple_repeat Simple_repeat 2 131 0 2 969 503 260 24 0 chr13 50336157 50336280 -69948032 - RSINE1 SINE B4 -29 136 11 2 969 322 207 96 35 chr13 50336287 50336402 -69947910 - L1MD LINE L1 -2471 3675 3554 2 969 202 132 26 0 chr13 50336707 50336745 -69947567 + T-rich Low_complexity Low_complexity 4 42 0 2 969 859 99 122 0 chr13 50338194 50338325 -69945987 + B1_Mus1 SINE Alu 2 148 0 2 969 1684 226 112 21 chr13 50344828 50345362 -69938950 - RMER4B LTR ERVK 0 585 3 2 969 1597 250 132 12 chr13 50345911 50346486 -69937826 - RMER19A LTR ERVK 0 737 94 2 969 611 284 138 33 chr13 50346959 50347385 -69936927 - L1_Mur3 LINE L1 -190 5690 5220 2 969 2144 235 41 18 chr13 50347694 50348205 -69936107 - Lx5 LINE L1 -8 7042 6520 2 969 1258 236 7 7 chr13 50348203 50348506 -69935806 - Lx5 LINE L1 -982 6068 5766 2 969 1771 174 65 0 chr13 50348524 50348845 -69935467 - Lx3B LINE L1 -5 6968 6627 2 969 1331 188 9 81 chr13 50348845 50349192 -69935120 + RLTRETN_Mm LTR ERVK 1 322 0 2 969 22826 112 29 31 chr13 50349193 50355526 -69928786 + MMETn-int LTR ERVK 2 7299 -107 2 969 274 197 13 90 chr13 50355526 50355604 -69928708 + RLTRETN_Mm LTR ERVK 1 72 -250 2 969 4627 151 21 36 chr13 50355604 50355722 -69928590 - L1_Mur1 LINE L1 -1108 4778 4665 2 969 3641 62 7 0 chr13 50355722 50356177 -69928135 + L1Md_F3 LINE L1 6125 6582 -2 2 969 4627 151 21 36 chr13 50356177 50356942 -69927370 - L1_Mur1 LINE L1 -1222 4664 3908 2 969 378 222 20 10 chr13 50357072 50357172 -69927140 - RLTR10A LTR ERVK -164 247 147 2 969 1636 163 29 7 chr13 50357228 50357537 -69926775 - L1_Mur1 LINE L1 -1968 3918 3603 2 969 246 290 0 0 chr13 50359430 50359499 -69924813 + CT-rich Low_complexity Low_complexity 2 70 0 3 969 2792 184 99 38 chr13 50359916 50360749 -69923563 + RLTR13C1 LTR ERVK 1 983 0 3 969 1430 211 93 16 chr13 50361668 50362034 -69922278 + ORR1B1 LTR MaLR 1 394 0 3 969 289 335 157 7 chr13 50362117 50362270 -69922042 + Lx9 LINE L1 6341 6516 -1128 3 969 21 57 0 0 chr13 50362410 50362445 -69921867 + AT_rich Low_complexity Low_complexity 1 35 0 3 969 960 106 35 21 chr13 50363899 50364043 -69920269 - B1_Mus2 SINE Alu -1 146 1 3 969 455 316 22 0 chr13 50364278 50364414 -69919898 - RSINE1 SINE B4 -12 153 15 3 969 484 294 73 27 chr13 50364427 50364647 -69919665 - L1M2 LINE L1 -2472 3671 3442 3 969 183 80 0 0 chr13 50364735 50364760 -69919552 + (T)n Simple_repeat Simple_repeat 1 25 0 3 969 1174 109 49 5 chr13 50364771 50364955 -69919357 - B2_Mm2 SINE B2 -2 193 2 3 969 23 33 0 0 chr13 50365188 50365218 -69919094 + AT_rich Low_complexity Low_complexity 1 30 0 3 969 14096 96 12 9 chr13 50365792 50368551 -69915761 - L1VL2 LINE L1 -635 2980 214 3 969 261 57 0 0 chr13 50371770 50371805 -69912507 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 969 867 189 114 5 chr13 50372854 50373056 -69911256 - URR1A DNA MER1_type 0 226 3 3 969 383 260 0 0 chr13 50373635 50373758 -69910554 + (TATATG)n Simple_repeat Simple_repeat 2 124 0 3 969 4702 112 45 12 chr13 50374331 50375067 -69909245 - L1_Mus4 LINE L1 0 6636 5877 3 969 244 217 29 14 chr13 50375123 50375193 -69909119 - RLTR13D3 LTR ERVK -61 1053 983 3 969 213 135 0 0 chr13 50375495 50375532 -69908780 - B2_Mm2 SINE B2 -157 38 2 3 969 22 0 0 0 chr13 50375589 50375611 -69908701 + AT_rich Low_complexity Low_complexity 1 22 0 3 969 216 0 0 0 chr13 50375626 50375650 -69908662 + (T)n Simple_repeat Simple_repeat 1 24 0 3 969 27 49 0 0 chr13 50375716 50375757 -69908555 + AT_rich Low_complexity Low_complexity 1 41 0 3 969 7381 82 4 1 chr13 50376068 50377221 -69907091 - L1Md_F2 LINE L1 -1 6581 5423 3 969 393 328 39 23 chr13 50377513 50377772 -69906540 - RCHARR1 DNA MER1_type -1 973 711 3 969 441 0 0 0 chr13 50378275 50378324 -69905988 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 969 266 307 53 43 chr13 50379119 50379327 -69904985 + RLTR15 LTR ERVK 33 242 -117 3 969 1043 83 14 0 chr13 50380249 50380394 -69903918 + B1_Mus1 SINE Alu 2 148 0 3 969 414 114 0 0 chr13 50381990 50382060 -69902252 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 969 456 341 8 0 chr13 50382984 50383116 -69901196 - RSINE1 SINE B4 -14 151 19 3 969 316 282 85 45 chr13 50383136 50383359 -69900953 - L1_Mur3 LINE L1 -2470 3676 3445 3 969 475 66 26 0 chr13 50385192 50385268 -69899044 + (CA)n Simple_repeat Simple_repeat 2 79 0 3 969 652 122 28 0 chr13 50385903 50386010 -69898302 + B1_Mm SINE Alu 1 110 -37 3 969 1097 137 38 5 chr13 50386074 50386258 -69898054 + B2_Mm2 SINE B2 1 190 -5 3 969 552 205 8 0 chr13 50386473 50386590 -69897722 + B3 SINE B2 1 118 -98 3 969 38981 8 0 0 chr13 50388513 50393913 -69890399 + L1Md_T LINE L1 188 5586 -297 3 969 9174 5 0 0 chr13 50393913 50394909 -69889403 + L1Md_T LINE L1 5587 6582 0 3 969 2714 16 0 3 chr13 50394909 50395203 -69889109 + L1_Mm LINE L1 5293 5586 -297 3 969 9186 4 0 0 chr13 50395203 50396199 -69888113 + L1Md_A LINE L1 5587 6582 0 3 969 482 215 86 36 chr13 50402683 50402823 -69881489 - RMER19A LTR ERVK -492 245 99 3 969 729 296 135 19 chr13 50403298 50403721 -69880591 - L1_Mur3 LINE L1 -188 5692 5221 3 969 2144 243 42 8 chr13 50404032 50404538 -69879774 - Lx5 LINE L1 -8 7042 6520 3 969 1295 216 17 7 chr13 50404537 50404835 -69879477 - Lx5 LINE L1 -984 6066 5766 3 969 6094 155 38 13 chr13 50404853 50405947 -69878365 - Lx3B LINE L1 -5 6968 5847 3 969 4664 72 2 3 chr13 50405948 50406536 -69877776 + LTRIS_Mus LTR ERV1 1 587 0 3 969 3124 158 43 34 chr13 50406536 50406936 -69877376 + MuRRS-int LTR ERV1 1 693 -3997 3 969 255 31 0 0 chr13 50406936 50406968 -69877344 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 969 16334 176 29 32 chr13 50406968 50412222 -69872090 + MuRRS-int LTR ERV1 380 5706 -2072 3 969 4633 62 5 3 chr13 50412222 50412808 -69871504 + LTRIS_Mus LTR ERV1 1 587 0 3 969 6798 139 24 2 chr13 50412808 50413895 -69870417 - L1_Mur1 LINE L1 -34 5852 4742 3 969 2076 161 43 14 chr13 50413901 50414323 -69869989 + L1_Mur2 LINE L1 3503 3936 -1941 3 969 2956 218 48 26 chr13 50414304 50415166 -69869146 + Lx4B LINE L1 6089 7058 0 3 969 189 0 0 0 chr13 50416155 50416176 -69868136 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 969 210 267 0 0 chr13 50416179 50416224 -69868088 + (TATATG)n Simple_repeat Simple_repeat 3 47 0 3 969 362 125 0 0 chr13 50416551 50416607 -69867705 - L1M4c LINE L1 -4790 1594 1539 3 969 325 269 38 9 chr13 50416664 50416769 -69867543 + PB1D7 SINE Alu 5 112 -8 3 969 470 165 0 0 chr13 50416834 50416913 -69867399 - RLTR24 LTR ERV1 0 529 451 3 969 1759 128 63 16 chr13 50419099 50419417 -69864895 - ORR1B2 LTR MaLR -29 338 6 3 969 21 36 0 0 chr13 50425580 50425608 -69858704 + AT_rich Low_complexity Low_complexity 1 28 0 3 969 1042 279 102 20 chr13 50427290 50427693 -69856619 + RMER20B LTR ERVK 25 460 -56 3 969 996 92 0 0 chr13 50428303 50428444 -69855868 + (GA)n Simple_repeat Simple_repeat 2 142 0 3 969 602 181 9 0 chr13 50429336 50429452 -69854860 + B3 SINE B2 2 118 -98 3 969 249 219 108 15 chr13 50429481 50429546 -69854766 + L1M5 LINE L1 5231 5301 -845 3 969 3904 179 3 6 chr13 50430242 50430943 -69853369 - Lx LINE L1 -1 6653 5955 3 969 1824 239 82 10 chr13 50436799 50437301 -69847011 - RMER4B LTR ERVK 0 585 48 3 969 360 0 0 0 chr13 50437304 50437344 -69846968 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 969 1451 272 69 50 chr13 50437907 50438565 -69845747 - RMER19A LTR ERVK 0 611 9 3 969 303 45 0 0 chr13 50438882 50438926 -69845386 - L1_Mus2 LINE L1 -1 6565 6522 3 969 4280 177 63 32 chr13 50439843 50440761 -69843551 - RMER16-int LTR ERVK -3866 1540 594 3 969 1953 116 9 59 chr13 50440761 50441100 -69843212 - RLTRETN_Mm LTR ERVK 0 322 1 3 969 9627 156 18 28 chr13 50441100 50443131 -69841181 - MMETn-int LTR ERVK 0 4844 3219 3 969 20302 154 50 24 chr13 50443129 50444540 -69839772 - MMETn-int LTR ERVK -2295 5111 2380 3 969 189 0 0 0 chr13 50444540 50444561 -69839751 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 3 969 20302 113 17 36 chr13 50444561 50445391 -69838921 - MMETn-int LTR ERVK -2465 2379 1554 3 969 2238 51 0 7 chr13 50445391 50445669 -69838643 - L1Md_F2 LINE L1 -8 6574 6299 3 969 20302 113 17 36 chr13 50445669 50447280 -69837032 - MMETn-int LTR ERVK -3291 1553 5 3 969 1708 154 9 62 chr13 50447280 50447620 -69836692 - RLTRETN_Mm LTR ERVK 0 322 1 3 969 678 164 188 43 chr13 50447620 50447882 -69836430 - RMER16-int LTR ERVK -4982 424 255 3 969 2620 153 98 26 chr13 50447920 50448476 -69835836 - RLTR1D LTR ERV1 0 624 1 3 969 270 274 0 16 chr13 50448556 50448619 -69835693 + C-rich Low_complexity Low_complexity 6 67 0 3 969 457 269 153 72 chr13 50448944 50449277 -69835035 - RLTR9A LTR ERVK -8 360 1 3 969 414 0 0 0 chr13 50450600 50450646 -69833666 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 969 522 289 80 62 chr13 50451716 50452004 -69832308 - RLTR16 LTR ERVK -207 298 6 3 969 4525 75 5 7 chr13 50452359 50452947 -69831365 - LTRIS_Mus LTR ERV1 0 587 1 3 969 10699 93 3 12 chr13 50452947 50454378 -69829934 - MuRRS-int LTR ERV1 0 4690 3273 3 969 7543 69 2 7 chr13 50454410 50455363 -69828949 - MuRRS-int LTR ERV1 -1413 3277 2330 3 969 1405 191 41 2 chr13 50455364 50455655 -69828657 - Lx LINE L1 -288 6770 6261 3 969 556 174 17 9 chr13 50456051 50456167 -69828145 + B3 SINE B2 1 117 -99 3 969 1357 202 99 18 chr13 50456224 50456608 -69827704 - RLTR16 LTR ERVK 0 505 91 3 969 585 0 0 0 chr13 50457188 50457253 -69827059 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 969 891 167 120 10 chr13 50458999 50459199 -69825113 - URR1A DNA MER1_type -2 224 3 3 969 287 150 17 0 chr13 50459806 50459866 -69824446 + (TCTCTG)n Simple_repeat Simple_repeat 2 62 0 3 969 4704 118 35 7 chr13 50460450 50461189 -69823123 - L1_Mus4 LINE L1 0 6636 5877 3 969 521 30 15 0 chr13 50461694 50461761 -69822551 + (TCCC)n Simple_repeat Simple_repeat 3 70 0 3 121 286 307 56 50 chr13 50462607 50462768 -69821544 - RMER12 LTR ERVK -61 1261 1100 3 970 3074 186 39 28 chr13 50462929 50463719 -69820593 - RLTR22_Mur LTR ERVK -1049 799 1 3 970 657 190 35 8 chr13 50467865 50468035 -69816277 - RMER19A LTR ERVK 0 737 434 3 970 4288 134 74 29 chr13 50468035 50468904 -69815408 - RLTR13D6 LTR ERVK 0 1023 1 3 970 337 265 69 42 chr13 50468915 50469033 -69815279 - RMER19A LTR ERVK -162 575 404 3 970 2223 167 100 110 chr13 50469041 50469799 -69814513 + MurERV4_19-int LTR ERVK 4912 5763 -17 3 970 255 188 78 0 chr13 50469807 50469871 -69814441 - L1M2 LINE L1 -3330 2813 2745 3 970 22 56 0 0 chr13 50470121 50470157 -69814155 + AT_rich Low_complexity Low_complexity 1 36 0 3 970 1072 122 0 0 chr13 50470511 50470658 -69813654 + B1_Mus1 SINE Alu 2 148 0 3 970 459 92 0 0 chr13 50470658 50470723 -69813589 + (A)n Simple_repeat Simple_repeat 1 65 0 3 970 685 73 0 0 chr13 50470901 50470997 -69813315 + BC1_Mm scRNA scRNA 1 96 -56 3 970 272 243 126 20 chr13 50471188 50471283 -69813029 + PB1D10 SINE Alu 27 117 0 3 970 5758 78 39 7 chr13 50471430 50472871 -69811441 - L1VL2 LINE L1 -1799 1816 335 3 970 2336 211 138 8 chr13 50472904 50473549 -69810763 + RMER19B LTR ERVK 1 729 -173 3 970 1297 167 44 44 chr13 50473551 50473871 -69810441 - L1_Mur2 LINE L1 -1720 4157 3838 3 970 2283 111 53 26 chr13 50473872 50474252 -69810060 - Lx LINE L1 -2 6652 6263 3 970 343 181 0 5 chr13 50474260 50474335 -69809977 - Lx LINE L1 -1055 5921 5849 3 970 4220 185 26 42 chr13 50474327 50475338 -69808974 - L1_Mur2 LINE L1 -1892 3985 2992 3 970 22972 103 4 3 chr13 50475349 50479485 -69804827 - L1_Mus1 LINE L1 -2 6565 2423 3 970 464 264 0 9 chr13 50479565 50479676 -69804636 - ETnERV2-int LTR ERVK -4823 2583 2474 3 970 3012 54 0 0 chr13 50479687 50480041 -69804271 - IAPEY2_LTR LTR ERVK -3 354 1 3 970 3265 130 15 30 chr13 50480041 50480771 -69803541 - IAPEY3-int LTR ERVK 0 7581 6910 3 970 507 34 0 0 chr13 50480774 50480833 -69803479 - IAPEY3-int LTR ERVK -2770 4910 4852 3 970 3544 56 5 0 chr13 50480826 50481253 -69803059 - IAPEY3-int LTR ERVK -4991 2689 2261 3 970 9538 132 11 21 chr13 50481251 50482877 -69801435 - IAPEY3-int LTR ERVK -5698 1982 2 3 970 2179 90 27 6 chr13 50482877 50483224 -69801088 - IAPEY2_LTR LTR ERVK -5 362 1 3 970 205 156 0 0 chr13 50483264 50483296 -69801016 + T-rich Low_complexity Low_complexity 2 33 0 3 970 27 0 0 0 chr13 50483759 50483786 -69800526 + AT_rich Low_complexity Low_complexity 1 27 0 4 970 190 182 0 52 chr13 50484072 50484130 -69800182 + C-rich Low_complexity Low_complexity 2 56 0 4 970 492 280 138 57 chr13 50484457 50484790 -69799522 - RLTR9A LTR ERVK -8 360 1 4 970 306 0 0 0 chr13 50486116 50486150 -69798162 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 970 2748 88 0 27 chr13 50486226 50486601 -69797711 + RLTR10B2 LTR ERVK 1 365 0 4 970 417 141 0 0 chr13 50486605 50486690 -69797622 + (T)n Simple_repeat Simple_repeat 1 85 0 4 970 1106 75 7 0 chr13 50486691 50486837 -69797475 - B1_Mus2 SINE Alu 0 147 1 4 970 551 301 170 26 chr13 50487713 50488130 -69796182 - RLTR16 LTR ERVK -23 482 6 4 970 2238 126 0 3 chr13 50490251 50490586 -69793726 - Lx LINE L1 -5 6649 6316 4 970 572 198 9 0 chr13 50491063 50491179 -69793133 + B3 SINE B2 1 117 -99 4 970 2053 179 90 13 chr13 50491236 50491705 -69792607 - RLTR16 LTR ERVK 0 505 1 4 970 6295 78 0 0 chr13 50497722 50498539 -69785773 - L1Md_F2 LINE L1 -1 6581 5765 4 970 6135 107 12 27 chr13 50498539 50500000 -69784312 + L1Md_A LINE L1 307 1680 -4203 4 970 6717 59 5 1 chr13 50500000 50500869 -69783443 + L1Md_F3 LINE L1 1681 2552 -3331 1 970 926 54 0 0 chr13 50500870 50500981 -69783331 + L1Md_F3 LINE L1 5476 5586 -297 1 970 8356 33 2 5 chr13 50500982 50501979 -69782333 + L1Md_F3 LINE L1 5588 6581 -3 1 970 2714 95 0 0 chr13 50501979 50502337 -69781975 - L1_Mm LINE L1 -103 5780 5423 2 970 514 318 8 0 chr13 50503066 50503198 -69781114 - RSINE1 SINE B4 -14 151 19 3 970 342 277 85 45 chr13 50503218 50503441 -69780871 - L1M4 LINE L1 -2470 3676 3445 4 970 183 122 40 20 chr13 50504921 50504971 -69779341 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 970 1113 151 32 0 chr13 50505630 50505815 -69778497 + B2_Mm2 SINE B2 1 191 -4 6 970 506 209 26 0 chr13 50506034 50506149 -69778163 + B3 SINE B2 1 118 -98 7 970 661 102 28 0 chr13 50509192 50509300 -69775012 + L1Md_F3 LINE L1 5876 5986 -598 8 970 311 295 18 29 chr13 50510099 50510270 -69774042 + L1M2 LINE L1 2983 3151 -2992 9 970 1026 201 260 7 chr13 50510408 50510582 -69773730 + ORR1D1 LTR MaLR 1 228 -146 1 970 213 39 0 0 chr13 50510582 50510608 -69773704 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 1 970 1026 201 260 7 chr13 50510608 50510729 -69773583 + ORR1D1 LTR MaLR 229 371 -3 1 970 484 259 9 0 chr13 50510855 50510967 -69773345 + B1_Mur2 SINE Alu 12 124 -25 1 970 282 227 38 108 chr13 50511290 50511448 -69772864 - ORR1E LTR MaLR -6 373 227 1 970 352 305 38 0 chr13 50511460 50511565 -69772747 - ORR1E LTR MaLR -248 111 3 1 970 279 0 0 0 chr13 50512445 50512476 -69771836 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 970 574 252 66 169 chr13 50513895 50514367 -69769945 - RLTR23 LTR ERV1 0 430 8 1 970 199 54 26 26 chr13 50514913 50514951 -69769361 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1 970 299 314 9 95 chr13 50515509 50515625 -69768687 - ID_B1 SINE B4 -26 198 93 1 970 295 284 0 120 chr13 50515530 50515638 -69768674 - PB1D10 SINE Alu -22 95 1 1 970 21 0 0 0 chr13 50515681 50515702 -69768610 + AT_rich Low_complexity Low_complexity 1 21 0 1 970 273 262 105 95 chr13 50515886 50516076 -69768236 - Charlie8 DNA MER1_type -379 2049 1858 2 970 1657 138 155 103 chr13 50516648 50517035 -69767277 - MTB_Mm LTR MaLR 0 407 1 2 970 218 322 34 11 chr13 50517458 50517546 -69766766 - PB1D7 SINE Alu -1 119 30 2 970 198 103 0 0 chr13 50517954 50517983 -69766329 + (T)n Simple_repeat Simple_repeat 1 29 0 2 970 235 234 194 38 chr13 50518036 50518196 -69766116 + L1M4 LINE L1 2236 2420 -3726 2 970 324 328 24 8 chr13 50518413 50518536 -69765776 - MIR SINE MIR -118 144 20 2 970 501 17 0 0 chr13 50519545 50519603 -69764709 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 970 372 237 55 48 chr13 50519801 50519947 -69764365 + MLT1A1 LTR MaLR 254 400 -8 2 970 221 258 110 22 chr13 50520022 50520113 -69764199 - PB1D10 SINE Alu -17 100 2 2 970 343 256 215 0 chr13 50520664 50520785 -69763527 - MTEa LTR MaLR -201 178 32 2 970 219 88 0 0 chr13 50521142 50521176 -69763136 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 970 554 317 40 40 chr13 50523427 50523729 -69760583 - RLTR6-int LTR ERV1 -128 7650 7349 3 970 700 323 75 47 chr13 50524259 50524743 -69759569 - MuRRS4-int LTR ERV1 -5128 2478 1960 3 970 736 269 99 32 chr13 50525103 50525475 -69758837 - MuRRS4-int LTR ERV1 -3627 1436 1040 3 970 402 284 43 8 chr13 50527983 50528100 -69756212 - PB1 SINE Alu -3 124 4 3 970 283 239 27 27 chr13 50530387 50530460 -69753852 + ID4 SINE ID 10 82 -1 3 970 558 228 79 10 chr13 50530548 50530726 -69753586 + B3 SINE B2 9 195 0 3 970 515 271 50 22 chr13 50530992 50531173 -69753139 + RMER20B LTR ERVK 234 419 -208 3 970 280 274 95 0 chr13 50531307 50531402 -69752910 + RMER20B LTR ERVK 451 554 -73 3 970 777 224 111 56 chr13 50532390 50532660 -69751652 + MTB LTR MaLR 1 285 -115 3 970 3692 125 53 24 chr13 50532663 50533486 -69750826 - Lx4B LINE L1 -1000 6058 5222 3 970 4870 140 56 29 chr13 50533486 50534326 -69749986 + Lx4B LINE L1 6192 7054 -4 3 970 324 120 0 0 chr13 50534328 50534378 -69749934 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 3 970 1106 164 38 19 chr13 50534402 50534613 -69749699 + MTC LTR MaLR 199 413 -8 4 970 275 274 55 81 chr13 50534743 50534849 -69749463 - B1F2 SINE Alu -48 102 2 4 970 268 289 13 0 chr13 50535162 50535238 -69749074 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 970 466 68 0 54 chr13 50535247 50535340 -69748972 + (TCCCC)n Simple_repeat Simple_repeat 4 91 0 4 970 870 221 12 79 chr13 50535812 50536053 -69748259 + MTE2a LTR MaLR 155 379 0 4 970 369 0 0 0 chr13 50538070 50538111 -69746201 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 970 676 252 33 0 chr13 50538148 50538299 -69746013 - B3A SINE B2 -42 156 1 4 970 359 305 23 23 chr13 50538443 50538574 -69745738 + B1F SINE Alu 10 140 -9 4 970 201 133 0 0 chr13 50538577 50538607 -69745705 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 970 249 33 0 0 chr13 50538698 50538728 -69745584 + (TAA)n Simple_repeat Simple_repeat 2 31 0 4 970 532 176 29 10 chr13 50539606 50539709 -69744603 + RMER20A LTR ERVK 1 105 -411 5 970 1425 167 90 14 chr13 50539712 50539991 -69744321 + RMER20A LTR ERVK 217 516 0 5 970 372 164 0 0 chr13 50539999 50540066 -69744246 + (TATG)n Simple_repeat Simple_repeat 2 68 0 5 970 257 204 57 0 chr13 50540077 50540165 -69744147 + (TA)n Simple_repeat Simple_repeat 2 94 0 5 970 516 32 0 0 chr13 50541177 50541239 -69743073 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 970 707 223 143 12 chr13 50541319 50541487 -69742825 - B4 SINE B4 -71 221 32 5 970 7341 170 89 34 chr13 50541599 50543374 -69740938 - ORR1A4-int LTR MaLR -91 1872 1 5 970 1719 132 3 119 chr13 50543374 50543735 -69740577 - ORR1A4 LTR MaLR 0 329 11 5 970 283 294 75 68 chr13 50543736 50543882 -69740430 + Lx8 LINE L1 6569 6715 -981 5 970 461 17 17 0 chr13 50543954 50544012 -69740300 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 5 970 1114 66 22 0 chr13 50544015 50544152 -69740160 - B1_Mm SINE Alu -7 140 1 5 970 1717 10 0 15 chr13 50544156 50544352 -69739960 - B2_Mm1a SINE B2 0 193 1 5 970 306 171 110 59 chr13 50544356 50544486 -69739826 + Lx8 LINE L1 7353 7471 -2 5 970 313 201 15 0 chr13 50544543 50544609 -69739703 + L1_Rod LINE L1 5346 5452 -710 6 970 693 306 75 30 chr13 50544608 50544874 -69739438 + Lx8 LINE L1 7075 7352 -121 6 970 540 148 11 0 chr13 50544918 50545006 -69739306 - MurERV4-int LTR ERVK -5136 124 36 6 970 3264 133 56 4 chr13 50545032 50545584 -69738728 - RMER4B LTR ERVK -3 582 2 6 970 809 179 0 6 chr13 50545692 50545855 -69738457 + GA-rich Low_complexity Low_complexity 3 164 0 6 970 564 187 0 0 chr13 50545937 50546060 -69738252 + (CATA)n Simple_repeat Simple_repeat 1 123 0 6 970 309 286 173 5 chr13 50546100 50546297 -69738015 + L1M4c LINE L1 1496 1725 -4659 6 970 752 325 52 19 chr13 50546311 50546581 -69737731 + B4 SINE B4 6 284 -8 6 970 3545 25 2 0 chr13 50546953 50547352 -69736960 + MTB LTR MaLR 1 400 0 6 970 1430 164 33 66 chr13 50547753 50548086 -69736226 + RLTRETN_Mm LTR ERVK 1 322 0 6 970 631 341 64 22 chr13 50548216 50548483 -69735829 + B4A SINE B4 1 278 -14 7 970 369 93 0 0 chr13 50548485 50548539 -69735773 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 970 509 306 15 0 chr13 50548737 50548871 -69735441 - B4A SINE B4 -155 137 2 7 970 467 236 107 118 chr13 50548981 50549327 -69734985 + RLTR11B LTR ERVK 1 342 -111 7 970 1146 145 124 62 chr13 50550190 50550448 -69733864 - ORR1C2 LTR MaLR 0 384 111 7 970 25 31 0 0 chr13 50550448 50550480 -69733832 + AT_rich Low_complexity Low_complexity 1 32 0 7 970 732 256 45 49 chr13 50550492 50550759 -69733553 - RLTR12B LTR ERVK -14 514 249 7 970 1464 128 60 8 chr13 50550759 50550775 -69733537 + L1_Mur2 LINE L1 2033 2048 -3829 7 970 324 0 0 0 chr13 50550775 50550811 -69733501 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 970 1464 128 60 8 chr13 50550811 50551045 -69733267 + L1_Mur2 LINE L1 2049 2294 -3583 7 970 15247 107 21 34 chr13 50551044 50553465 -69730847 + L1_Mur2 LINE L1 3375 5763 -114 7 970 417 85 61 0 chr13 50553465 50553547 -69730765 + Lx4A LINE L1 6961 7047 -11 7 970 1224 40 0 0 chr13 50553548 50553698 -69730614 + (GAAA)n Simple_repeat Simple_repeat 4 153 0 8 970 570 103 0 0 chr13 50553698 50553785 -69730527 + (GGGA)n Simple_repeat Simple_repeat 3 89 0 8 970 387 293 104 86 chr13 50555253 50555561 -69728751 - ORR1E LTR MaLR -80 314 3 8 970 431 317 66 0 chr13 50555561 50555704 -69728608 - ORR1E-int LTR MaLR -51 1529 1376 8 970 2943 95 5 2 chr13 50555933 50556333 -69727979 + RLTR9D LTR ERVK 1 401 -2 8 970 871 49 32 0 chr13 50556334 50556457 -69727855 + (GAAA)n Simple_repeat Simple_repeat 3 129 0 8 970 243 198 62 0 chr13 50556457 50556538 -69727774 + GA-rich Low_complexity Low_complexity 2 87 0 8 970 312 399 82 8 chr13 50556577 50556845 -69727467 - ORR1E-int LTR MaLR -274 1306 1019 8 970 264 331 97 87 chr13 50557368 50557656 -69726656 + B4 SINE B4 2 292 0 8 970 1455 247 39 25 chr13 50557878 50558239 -69726073 + ORR1D2 LTR MaLR 5 370 0 8 970 252 0 0 0 chr13 50559161 50559189 -69725123 + (ATAAG)n Simple_repeat Simple_repeat 1 28 0 8 970 210 37 0 0 chr13 50559555 50559582 -69724730 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 970 462 292 24 42 chr13 50561211 50561379 -69722933 - Tigger5 DNA MER2_type -54 2352 2188 9 970 198 0 0 0 chr13 50566590 50566612 -69717700 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 9 970 203 244 0 0 chr13 50568586 50568627 -69715685 + CT-rich Low_complexity Low_complexity 1 41 0 9 970 822 233 0 0 chr13 50568633 50569049 -69715263 + (TG)n Simple_repeat Simple_repeat 1 416 0 9 970 289 216 131 44 chr13 50571522 50571682 -69712630 + L1MCa LINE L1 2104 2277 -4231 9 970 684 336 10 47 chr13 50572215 50572244 -69712068 - B4 SINE B4 -4 288 266 9 970 387 0 0 0 chr13 50572244 50572287 -69712025 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 970 684 336 10 47 chr13 50572287 50572554 -69711758 - B4 SINE B4 -27 265 3 9 970 1048 122 0 22 chr13 50573136 50573320 -69710992 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 9 970 243 349 27 18 chr13 50573900 50574011 -69710301 + PB1D7 SINE Alu 7 118 -2 9 970 243 0 0 0 chr13 50574015 50574042 -69710270 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 9 970 3280 87 112 34 chr13 50574313 50574839 -69709473 + RMER2 LTR ERV1 1 567 0 1 970 275 292 0 0 chr13 50574916 50574988 -69709324 + RLTR24 LTR ERV1 1 72 -457 1 970 467 167 9 81 chr13 50575835 50575946 -69708366 - PB1D9 SINE Alu 0 120 18 1 970 210 257 27 54 chr13 50576727 50576801 -69707511 - ID4 SINE ID -10 73 2 1 970 778 225 71 11 chr13 50576894 50577078 -69707234 + B3 SINE B2 19 213 -3 1 970 387 256 70 128 chr13 50577086 50577413 -69706899 - L1MCa LINE L1 -1052 5269 4962 1 970 322 234 80 90 chr13 50577397 50577585 -69706727 - L1MCa LINE L1 -1554 4767 4582 1 970 192 179 0 0 chr13 50577591 50577630 -69706682 + CT-rich Low_complexity Low_complexity 3 41 0 1 970 307 296 102 0 chr13 50577814 50577912 -69706400 - B1F2 SINE Alu -21 128 21 1 970 583 216 93 0 chr13 50577937 50578099 -69706213 - L1MCa LINE L1 -2393 3928 3752 1 970 302 250 0 0 chr13 50578175 50578247 -69706065 - L1MCa LINE L1 -2560 3761 3690 1 970 215 344 95 8 chr13 50578272 50578398 -69705914 - RSINE1 SINE B4 0 165 29 1 970 2939 97 55 28 chr13 50578491 50578960 -69705352 - RLTR45 LTR ERVK 0 482 1 1 970 346 259 89 70 chr13 50579071 50579178 -69705134 - B4 SINE B4 -130 162 46 1 970 6837 61 54 2 chr13 50579178 50580061 -69704251 + RLTR13B3 LTR ERVK 1 929 0 1 970 346 259 89 70 chr13 50580061 50580111 -69704201 - B4 SINE B4 -247 45 2 1 970 263 299 80 6 chr13 50580111 50580286 -69704026 - L1MCa LINE L1 -4652 1856 1669 1 970 514 277 54 6 chr13 50580315 50580482 -69703830 - B3A SINE B2 -22 176 2 1 970 519 225 0 92 chr13 50580601 50580743 -69703569 - B1F1 SINE Alu -16 133 5 1 970 332 313 20 13 chr13 50581789 50581938 -69702374 + RNERVK23-int LTR ERVK 3219 3368 -4849 1 970 536 215 74 140 chr13 50581934 50582177 -69702135 - RLTR19-int LTR ERVK -3062 3075 2849 1 970 529 260 58 12 chr13 50582186 50582437 -69701875 + RNERVK23-int LTR ERVK 3140 3614 -4603 1 970 377 297 0 0 chr13 50582660 50582771 -69701541 + RNERVK23-int LTR ERVK 3233 3343 -2437 1 970 434 284 138 57 chr13 50583939 50584272 -69700040 + RLTR9A LTR ERVK 1 360 -8 1 970 222 150 0 0 chr13 50584597 50584637 -69699675 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 1 970 4668 179 69 34 chr13 50584770 50585954 -69698358 + RMER16-int LTR ERVK 255 2175 -5231 1 970 225 0 0 0 chr13 50587362 50587387 -69696925 + (T)n Simple_repeat Simple_repeat 1 25 0 1 970 737 98 9 0 chr13 50587667 50587779 -69696533 + (TTTC)n Simple_repeat Simple_repeat 3 115 0 1 970 21 0 0 0 chr13 50588887 50588908 -69695404 + AT_rich Low_complexity Low_complexity 1 21 0 1 970 505 245 0 9 chr13 50588975 50589086 -69695226 + RMER16-int LTR ERVK 2474 2583 -4823 1 970 22119 98 7 2 chr13 50589166 50592315 -69691997 + L1Md_F2 LINE L1 2423 5586 -297 1 970 7986 48 4 6 chr13 50592315 50593297 -69691015 + L1Md_F2 LINE L1 5587 6566 -16 1 121 9010 88 2 4 chr13 50593306 50595305 -69689007 + L1_Mus1 LINE L1 4572 6565 -2 1 971 4077 188 28 51 chr13 50595316 50596334 -69687978 + L1_Mur2 LINE L1 2992 3985 -1892 1 971 3660 119 17 2 chr13 50596326 50596858 -69687454 + Lx LINE L1 5849 6388 -266 1 971 2989 90 67 13 chr13 50596867 50597318 -69686994 - IAPLTR2_Mm LTR ERVK 0 475 1 1 971 15236 37 15 3 chr13 50597318 50599101 -69685211 - IAPEz-int LTR ERVK 0 6481 4678 1 971 1934 85 0 0 chr13 50599119 50599365 -69684947 - IAPEz-int LTR ERVK -5183 2497 2252 1 971 962 59 0 0 chr13 50599366 50599485 -69684827 - IAPEz-int LTR ERVK -5004 1477 1359 1 971 3608 81 48 29 chr13 50599485 50600268 -69684044 - IAPEz-int LTR ERVK -5819 662 9 1 971 2975 90 67 13 chr13 50600269 50600720 -69683592 - IAPLTR2_Mm LTR ERVK 0 475 1 1 971 1386 132 28 36 chr13 50600720 50600971 -69683341 + Lx LINE L1 6404 6652 -2 1 971 1364 167 45 22 chr13 50600972 50601285 -69683027 + L1_Mur2 LINE L1 3838 4157 -1720 1 971 2717 212 89 7 chr13 50601287 50601961 -69682351 - RMER19B LTR ERVK -173 729 1 1 971 5657 81 47 7 chr13 50601994 50603439 -69680873 + L1VL2 LINE L1 335 1826 -1789 1 971 247 297 0 42 chr13 50603578 50603673 -69680639 - PB1D10 SINE Alu 0 117 27 1 971 656 102 0 0 chr13 50603858 50603956 -69680356 - BC1_Mm scRNA scRNA -54 98 1 1 971 240 185 0 0 chr13 50604133 50604187 -69680125 + T-rich Low_complexity Low_complexity 1 54 0 1 971 961 103 81 0 chr13 50604197 50604333 -69679979 - B1_Mur4 SINE Alu -2 148 2 1 971 267 188 78 0 chr13 50604984 50605048 -69679264 + L1M2 LINE L1 2745 2813 -3330 1 971 1314 252 90 102 chr13 50605056 50605937 -69678375 - MurERV4_19-int LTR ERVK -17 5763 4894 1 971 367 276 37 1 chr13 50605937 50606045 -69678267 + RMER19A LTR ERVK 371 575 -162 1 971 4281 129 69 35 chr13 50606056 50606932 -69677380 + RLTR13D6 LTR ERVK 1 863 -39 1 971 657 190 35 8 chr13 50606932 50607102 -69677210 + RMER19A LTR ERVK 434 737 0 1 971 3130 181 42 30 chr13 50611290 50612080 -69672232 + RLTR22_Mur LTR ERVK 1 799 -1049 1 971 302 311 57 44 chr13 50612238 50612396 -69671916 + RMER12 LTR ERVK 1102 1261 -61 1 971 237 83 0 0 chr13 50613243 50613279 -69671033 + (GGGA)n Simple_repeat Simple_repeat 3 38 0 1 971 471 73 88 0 chr13 50613837 50613905 -69670407 + L1_Mus4 LINE L1 5809 5882 -754 1 971 239 108 0 0 chr13 50614399 50614436 -69669876 + B2_Mm2 SINE B2 2 38 -157 1 971 226 203 28 28 chr13 50614722 50614793 -69669519 + RLTR13D3 LTR ERVK 983 1053 -61 1 971 4891 111 24 13 chr13 50614849 50615601 -69668711 + L1_Mus4 LINE L1 5877 6636 0 1 971 2883 65 3 0 chr13 50616077 50616430 -69667882 + IAPEY2_LTR LTR ERVK 1 354 -3 1 971 465 181 0 0 chr13 50616540 50616673 -69667639 + GA-rich Low_complexity Low_complexity 2 134 0 1 971 847 199 114 5 chr13 50617263 50617465 -69666847 + URR1A DNA MER1_type 3 226 0 1 971 519 17 0 0 chr13 50619418 50619478 -69664834 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 971 4726 120 69 1 chr13 50622751 50623494 -69660818 + L1VL2 LINE L1 213 1005 -5330 1 971 37262 31 6 7 chr13 50623485 50629045 -69655267 + L1Md_T LINE L1 34 5585 -298 1 971 8336 43 1 0 chr13 50629046 50630039 -69654273 + L1Md_T LINE L1 5587 6580 -2 1 971 13315 92 14 4 chr13 50630041 50632020 -69652292 + L1_Mur1 LINE L1 1277 3277 -635 1 971 23 0 0 0 chr13 50632585 50632608 -69651704 + AT_rich Low_complexity Low_complexity 1 23 0 1 971 1211 140 0 5 chr13 50632861 50633055 -69651257 + B2_Mm2 SINE B2 2 194 -1 1 971 494 278 77 14 chr13 50633166 50633374 -69650938 + L1M4 LINE L1 3455 3675 -2471 1 971 467 302 23 0 chr13 50633393 50633522 -69650790 + RSINE1 SINE B4 22 153 -12 1 971 808 150 43 7 chr13 50633757 50633891 -69650421 + B1_Mus2 SINE Alu 1 139 -8 1 971 315 0 0 0 chr13 50633891 50633926 -69650386 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 971 229 335 151 12 chr13 50635540 50635712 -69648600 - Lx9 LINE L1 -1108 6536 6341 1 971 1336 231 94 3 chr13 50635795 50636156 -69648156 - ORR1B1 LTR MaLR 0 394 1 1 971 2718 186 107 37 chr13 50637080 50637907 -69646405 - RLTR13C1 LTR ERVK 0 983 1 1 971 272 262 12 12 chr13 50638329 50638414 -69645898 + GA-rich Low_complexity Low_complexity 2 86 0 1 971 558 41 0 0 chr13 50638466 50638539 -69645773 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 971 232 278 89 74 chr13 50641534 50641724 -69642588 - RLTR15 LTR ERVK -117 242 50 1 971 13467 155 30 14 chr13 50642981 50646765 -69637547 + Lx3B LINE L1 2640 6969 -4 1 971 1381 228 0 0 chr13 50646782 50647085 -69637227 + Lx5 LINE L1 5766 6068 -982 1 971 1926 249 55 24 chr13 50647083 50647590 -69636722 + Lx5 LINE L1 6520 7042 -8 1 971 731 284 133 29 chr13 50647902 50648323 -69635989 + L1_Mur3 LINE L1 5226 5690 -190 1 971 227 214 18 0 chr13 50648801 50648857 -69635455 + RMER19A LTR ERVK 71 127 -775 1 971 27070 75 4 0 chr13 50648857 50652414 -69631898 + L1Md_F2 LINE L1 2011 5582 -301 1 971 3315 27 19 17 chr13 50652414 50652824 -69631488 - IAPLTR2_Mm LTR ERVK 0 411 1 1 971 5752 64 12 19 chr13 50652826 50653575 -69630737 - IAPEz-int LTR ERVK -2 6479 5736 1 971 2237 68 0 0 chr13 50653574 50653852 -69630460 - IAPEz-int LTR ERVK -4845 1636 1359 1 971 3648 70 4 32 chr13 50653852 50654604 -69629708 - IAPEz-int LTR ERVK -5819 662 9 1 971 3469 28 97 2 chr13 50654605 50655039 -69629273 - IAPLTR2_Mm LTR ERVK 0 475 1 1 971 8068 54 2 2 chr13 50655049 50656033 -69628279 + L1Md_F2 LINE L1 5587 6570 -12 1 971 920 271 61 16 chr13 50656056 50656591 -69627721 + RMER19A LTR ERVK 132 737 0 1 971 1634 219 109 28 chr13 50657139 50657678 -69626634 + RMER4B LTR ERVK 3 585 0 1 971 524 222 8 0 chr13 50666790 50666907 -69617405 - B3 SINE B2 -98 118 1 1 971 1097 137 38 5 chr13 50667125 50667309 -69617003 - B2_Mm2 SINE B2 -5 190 1 1 971 652 122 28 0 chr13 50667373 50667480 -69616832 - B1_Mm SINE Alu -37 110 1 1 971 403 73 29 0 chr13 50668097 50668165 -69616147 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 971 320 293 76 36 chr13 50669998 50670221 -69614091 + L1M4 LINE L1 3445 3676 -2470 1 971 456 341 8 0 chr13 50670241 50670373 -69613939 + RSINE1 SINE B4 19 151 -14 1 971 414 114 0 0 chr13 50671297 50671367 -69612945 + (CA)n Simple_repeat Simple_repeat 2 71 0 1 971 1043 83 14 0 chr13 50672958 50673103 -69611209 - B1_Mus1 SINE Alu 0 148 2 1 971 240 307 53 43 chr13 50674025 50674233 -69610079 - RLTR15 LTR ERVK -117 242 33 1 971 225 0 0 0 chr13 50675028 50675053 -69609259 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 971 393 328 39 23 chr13 50675556 50675815 -69608497 + RCHARR1 DNA MER1_type 711 973 -1 1 971 1352 68 0 0 chr13 50676107 50676271 -69608041 + L1_Mm LINE L1 5423 5585 -298 1 971 7489 82 7 1 chr13 50676271 50677260 -69607052 + L1Md_F2 LINE L1 5587 6581 -1 1 971 951 171 0 39 chr13 50677260 50677283 -69607029 + L1_Mm LINE L1 5581 5598 -282 1 971 26 50 0 0 chr13 50677571 50677611 -69606701 + AT_rich Low_complexity Low_complexity 1 40 0 1 971 22 0 0 0 chr13 50677707 50677729 -69606583 + AT_rich Low_complexity Low_complexity 1 22 0 1 971 264 203 29 14 chr13 50678125 50678195 -69606117 + RLTR13D3 LTR ERVK 983 1053 -61 1 971 4861 119 25 11 chr13 50678251 50679000 -69605312 + L1_Mus4 LINE L1 5877 6636 0 1 971 198 232 0 35 chr13 50679384 50679442 -69604870 + L3 LINE CR1 2339 2394 -2095 1 971 331 263 0 0 chr13 50679572 50679671 -69604641 + (TA)n Simple_repeat Simple_repeat 1 99 0 1 971 841 180 119 10 chr13 50680224 50680426 -69603886 + URR1A DNA MER1_type 3 226 0 1 971 474 33 0 0 chr13 50682378 50682438 -69601874 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 971 13995 94 12 11 chr13 50685650 50688418 -69595894 + L1VL2 LINE L1 213 2980 -635 1 971 207 200 0 0 chr13 50688990 50689035 -69595277 + A-rich Low_complexity Low_complexity 1 45 0 1 971 1203 140 0 5 chr13 50689262 50689456 -69594856 + B2_Mm2 SINE B2 2 194 -1 1 971 478 303 62 0 chr13 50689567 50689775 -69594537 + L1M4 LINE L1 3455 3675 -2471 1 971 472 316 22 0 chr13 50689787 50689923 -69594389 + RSINE1 SINE B4 15 153 -12 1 971 884 142 35 7 chr13 50690158 50690300 -69594012 + B1_Mus2 SINE Alu 1 146 -1 1 971 277 291 36 0 chr13 50690308 50690418 -69593894 + L1MA4A LINE L1 5814 5927 -376 2 971 263 329 152 6 chr13 50691918 50692089 -69592223 - Lx9 LINE L1 -1108 6536 6341 2 971 1596 184 97 8 chr13 50692172 50692534 -69591778 - ORR1B1 LTR MaLR 0 394 1 2 971 2703 149 146 17 chr13 50693451 50694269 -69590043 - RLTR13D3 LTR ERVK 0 1114 1 2 971 303 294 0 0 chr13 50694690 50694775 -69589537 + GA-rich Low_complexity Low_complexity 2 86 0 2 971 495 33 0 0 chr13 50694827 50694888 -69589424 + (CA)n Simple_repeat Simple_repeat 1 61 0 2 971 245 279 83 70 chr13 50697881 50698106 -69586206 - RLTR15 LTR ERVK -117 242 50 2 971 1686 141 7 0 chr13 50699338 50699621 -69584691 + MusHAL1 LINE L1 1438 1722 -990 2 971 13486 151 28 20 chr13 50699622 50702378 -69581934 + Lx3B LINE L1 3405 6182 -791 2 971 2637 152 49 23 chr13 50702378 50702864 -69581448 + Lx3B LINE L1 6470 6968 -5 2 971 723 200 14 16 chr13 50702896 50703082 -69581230 + Lx5 LINE L1 5780 5963 -619 2 971 234 194 0 46 chr13 50703735 50703800 -69580512 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 2 971 617 140 28 0 chr13 50704409 50704516 -69579796 + B1_Mm SINE Alu 1 110 -37 2 971 1000 158 38 5 chr13 50704580 50704764 -69579548 + B2_Mm2 SINE B2 1 190 -5 2 971 537 222 8 0 chr13 50704981 50705098 -69579214 + B3 SINE B2 1 118 -98 2 971 1670 221 110 24 chr13 50712084 50712621 -69571691 - RMER4B LTR ERVK 0 585 3 2 971 869 268 49 10 chr13 50713170 50713603 -69570709 - RMER19A LTR ERVK 0 737 238 2 971 379 299 154 13 chr13 50713614 50713912 -69570400 - L1_Mur3 LINE L1 -320 5560 5221 2 971 1950 243 59 28 chr13 50714222 50714729 -69569583 - Lx5 LINE L1 -8 7042 6520 2 971 1283 215 18 7 chr13 50714727 50715013 -69569299 - Lx5 LINE L1 -982 6068 5780 2 971 6708 173 82 6 chr13 50715045 50715955 -69568357 - Lx3C LINE L1 -9 6967 6041 2 971 519 17 0 0 chr13 50715955 50716015 -69568297 + (TC)n Simple_repeat Simple_repeat 2 61 0 2 971 6708 173 82 6 chr13 50716015 50716191 -69568121 - Lx3C LINE L1 -936 6040 5846 2 971 4835 55 2 2 chr13 50716191 50716778 -69567534 + LTRIS_Mus LTR ERV1 1 587 0 2 971 6708 144 54 3 chr13 50716778 50717774 -69566538 - Lx3C LINE L1 -1131 5845 4742 2 971 2031 182 35 16 chr13 50717784 50718219 -69566093 + L1_Mur2 LINE L1 3507 3949 -1928 2 971 2871 218 37 27 chr13 50718189 50719054 -69565258 + Lx4B LINE L1 6089 6976 0 2 971 214 192 115 0 chr13 50719081 50719133 -69565179 + B1_Mur3 SINE Alu 79 136 -13 2 971 212 319 0 14 chr13 50720028 50720061 -69564251 + (CATATA)n Simple_repeat Simple_repeat 3 35 0 2 971 594 0 0 0 chr13 50720061 50720127 -69564185 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 971 212 319 0 14 chr13 50720127 50720166 -69564146 + (CATATA)n Simple_repeat Simple_repeat 6 44 0 2 971 362 125 0 0 chr13 50720493 50720549 -69563763 - L1M4c LINE L1 -4790 1594 1539 2 971 306 290 37 9 chr13 50720597 50720705 -69563607 + PB1D7 SINE Alu 7 117 -3 2 971 520 114 0 0 chr13 50720765 50720844 -69563468 - RLTR24 LTR ERV1 0 529 451 2 971 1608 161 62 12 chr13 50723021 50723342 -69560970 - ORR1B2 LTR MaLR -29 338 2 2 971 240 111 0 0 chr13 50724816 50724852 -69559460 + (AGGGGG)n Simple_repeat Simple_repeat 1 36 0 2 121 670 91 0 0 chr13 50724857 50724945 -69559367 - MERVL-int LTR ERVL -1869 3616 3529 2 972 7853 146 27 11 chr13 50724945 50726626 -69557686 + Lx3B LINE L1 5257 6968 -5 2 972 1369 216 7 0 chr13 50726658 50726945 -69557367 + Lx5 LINE L1 5780 6068 -982 2 972 1931 228 70 26 chr13 50726943 50727444 -69556868 + Lx5 LINE L1 6520 7042 -8 2 972 504 308 133 28 chr13 50727747 50728175 -69556137 + L1_Mur3 LINE L1 5218 5690 -190 2 972 283 161 18 0 chr13 50728654 50728710 -69555602 + RMER19A LTR ERVK 71 127 -775 2 972 29206 70 4 4 chr13 50728710 50732815 -69551497 + L1Md_F2 LINE L1 2011 6115 -467 2 972 2237 90 132 11 chr13 50732815 50733163 -69551149 - RLTR10 LTR ERVK 0 390 1 2 972 8753 184 40 31 chr13 50733163 50735594 -69548718 - RLTR10-int LTR ERVK -1299 5243 986 2 972 1412 314 42 9 chr13 50735615 50736278 -69548034 - RLTR10-int LTR ERVK -5120 1422 738 2 972 4828 86 45 0 chr13 50736330 50736993 -69547319 - RLTR10-int LTR ERVK -993 994 302 2 972 2169 99 132 11 chr13 50736993 50737341 -69546971 - RLTR10 LTR ERVK 0 390 1 2 972 3728 49 4 33 chr13 50737341 50737828 -69546484 + L1Md_F2 LINE L1 6110 6582 0 2 972 904 271 52 17 chr13 50737838 50738362 -69545950 + RMER19A LTR ERVK 146 737 0 2 972 1725 214 112 24 chr13 50738911 50739447 -69544865 + RMER4B LTR ERVK 3 585 0 2 972 518 222 8 0 chr13 50746183 50746300 -69538012 - B3 SINE B2 -98 118 1 2 972 1048 148 38 5 chr13 50746514 50746698 -69537614 - B2_Mm2 SINE B2 -5 190 1 2 972 582 168 28 0 chr13 50746764 50746871 -69537441 - B1_Mm SINE Alu -37 110 1 2 972 236 210 16 31 chr13 50747480 50747544 -69536768 + (TG)n Simple_repeat Simple_repeat 2 64 0 2 972 332 261 95 29 chr13 50749370 50749593 -69534719 + L1MD LINE L1 3445 3676 -2470 2 972 443 341 8 0 chr13 50749613 50749745 -69534567 + RSINE1 SINE B4 19 151 -14 2 972 519 107 0 0 chr13 50750667 50750751 -69533561 + (CA)n Simple_repeat Simple_repeat 2 85 0 2 972 1020 97 14 0 chr13 50752346 50752491 -69531821 - B1_Mus1 SINE Alu 0 148 2 2 972 240 35 0 0 chr13 50754410 50754439 -69529873 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 972 427 316 39 23 chr13 50754978 50755237 -69529075 + RCHARR1 DNA MER1_type 711 973 -1 2 972 1369 55 0 0 chr13 50755529 50755693 -69528619 + L1Md_T LINE L1 5423 5586 -297 2 972 8456 41 1 0 chr13 50755693 50756688 -69527624 + L1Md_T LINE L1 5587 6582 0 2 972 7526 53 2 13 chr13 50756876 50757827 -69526485 + L1Md_F2 LINE L1 5642 6582 0 2 972 4043 108 37 10 chr13 50757828 50758447 -69525865 + L1_Mus4 LINE L1 6001 6636 0 2 972 313 316 0 7 chr13 50759027 50759167 -69525145 + (CATATA)n Simple_repeat Simple_repeat 4 142 0 2 972 859 189 114 5 chr13 50759749 50759951 -69524361 + URR1A DNA MER1_type 3 226 0 2 972 228 86 0 0 chr13 50760999 50761034 -69523278 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 972 14029 95 12 10 chr13 50764231 50766995 -69517317 + L1VL2 LINE L1 213 2980 -635 2 972 27 87 0 0 chr13 50767532 50767601 -69516711 + AT_rich Low_complexity Low_complexity 1 69 0 2 972 1180 129 5 20 chr13 50767824 50768021 -69516291 + B2_Mm2 SINE B2 2 195 0 2 972 443 296 77 32 chr13 50768125 50768345 -69515967 + L1M2 LINE L1 3442 3671 -2472 2 972 420 338 22 0 chr13 50768358 50768494 -69515818 + RSINE1 SINE B4 15 153 -12 2 972 893 135 35 21 chr13 50768729 50768873 -69515439 + B1_Mus2 SINE Alu 1 146 -1 2 972 233 276 57 0 chr13 50768884 50768989 -69515323 + L1M1 LINE L1 5817 5927 -373 2 972 266 342 157 7 chr13 50770507 50770660 -69513652 - Lx9 LINE L1 -1128 6516 6341 2 972 1453 208 93 14 chr13 50770743 50771108 -69513204 - ORR1B1 LTR MaLR 0 394 1 2 972 2781 186 99 38 chr13 50772027 50772860 -69511452 - RLTR13C1 LTR ERVK 0 983 1 2 972 246 290 0 0 chr13 50773277 50773346 -69510966 + GA-rich Low_complexity Low_complexity 2 70 0 2 972 1636 163 29 7 chr13 50775239 50775548 -69508764 + L1_Mur1 LINE L1 3603 3918 -1968 2 972 407 248 149 21 chr13 50775604 50775839 -69508473 + RLTR10A LTR ERVK 147 411 0 2 972 4619 149 22 36 chr13 50775839 50776599 -69507713 + L1_Mur1 LINE L1 3913 4656 -1230 2 972 3627 64 7 0 chr13 50776599 50777054 -69507258 - L1Md_F3 LINE L1 -2 6582 6125 2 972 4619 149 22 36 chr13 50777054 50777172 -69507140 + L1_Mur1 LINE L1 4657 4778 -1108 2 972 274 197 13 90 chr13 50777172 50777250 -69507062 - RLTRETN_Mm LTR ERVK -250 72 1 2 972 15279 143 25 32 chr13 50777250 50780051 -69504261 - MMETn-int LTR ERVK -107 7299 3219 2 972 22762 85 5 33 chr13 50780050 50783584 -69500728 - MMETn-int LTR ERVK -2713 4693 2 2 972 1331 194 6 83 chr13 50783585 50783934 -69500378 - RLTRETN_Mm LTR ERVK 0 322 1 2 972 1836 170 56 0 chr13 50783934 50784258 -69500054 + Lx3B LINE L1 6627 6968 -5 2 972 1258 236 7 7 chr13 50784276 50784579 -69499733 + Lx5 LINE L1 5766 6068 -982 2 972 2165 233 41 18 chr13 50784577 50785088 -69499224 + Lx5 LINE L1 6520 7042 -8 2 972 39315 7 1 0 chr13 50785167 50790692 -69493620 + L1Md_A LINE L1 56 5586 -297 2 972 9146 5 0 0 chr13 50790692 50791688 -69492624 + L1Md_A LINE L1 5587 6582 0 2 972 25 0 0 0 chr13 50791709 50791734 -69492578 + AT_rich Low_complexity Low_complexity 1 25 0 2 972 547 285 141 33 chr13 50791965 50792390 -69491922 + L1_Mur3 LINE L1 5220 5690 -190 2 972 21 71 0 0 chr13 50792605 50792647 -69491665 + AT_rich Low_complexity Low_complexity 1 42 0 2 972 1597 250 132 12 chr13 50792871 50793446 -69490866 + RMER19A LTR ERVK 94 737 0 2 972 1684 224 114 21 chr13 50793995 50794528 -69489784 + RMER4B LTR ERVK 3 585 0 2 972 282 258 206 0 chr13 50800735 50800832 -69483480 - B3 SINE B2 -99 117 1 2 972 408 67 0 0 chr13 50801048 50801108 -69483204 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 972 1174 68 0 0 chr13 50801108 50801255 -69483057 - B1_Mus1 SINE Alu 0 148 2 2 972 352 189 96 35 chr13 50803053 50803168 -69481144 + L1MD LINE L1 3554 3675 -2471 2 972 509 275 36 0 chr13 50803175 50803313 -69480999 + RSINE1 SINE B4 11 153 -12 2 972 414 0 0 0 chr13 50804074 50804120 -69480192 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 972 2073 294 63 33 chr13 50804687 50805475 -69478837 + Lx6 LINE L1 6637 7448 -12 2 972 1148 164 18 0 chr13 50805688 50805914 -69478398 + Lx LINE L1 6418 6647 -7 2 972 773 314 43 62 chr13 50805940 50806616 -69477696 + L1M2 LINE L1 2676 3338 -2805 2 972 353 285 20 87 chr13 50806719 50806869 -69477443 + B1_Mur1 SINE Alu 10 149 0 2 972 1705 132 272 49 chr13 50806882 50807330 -69476982 - RLTR6_Mm LTR ERV1 -70 584 37 2 972 65236 34 23 0 chr13 50807443 50815065 -69469247 - RLTR6-int LTR ERV1 0 7778 1 2 972 1702 132 269 49 chr13 50815065 50815518 -69468794 - RLTR6_Mm LTR ERV1 -65 589 37 2 972 454 318 40 34 chr13 50815631 50815807 -69468505 + B3A SINE B2 11 187 -11 2 972 354 382 0 0 chr13 50815816 50815999 -69468313 + L1M2 LINE L1 3929 4111 -2032 2 972 3711 210 28 29 chr13 50816004 50816398 -69467914 + L1_Mur2 LINE L1 1092 1495 -4385 2 972 243 0 0 0 chr13 50816398 50816425 -69467887 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 972 3711 223 24 68 chr13 50816425 50817370 -69466942 + L1_Mur2 LINE L1 1496 2377 -3503 2 972 281 233 11 32 chr13 50817376 50817469 -69466843 + RMER4B LTR ERVK 490 580 -5 2 972 2821 64 0 0 chr13 50818136 50818482 -69465830 + ORR1A0 LTR MaLR 1 346 0 2 972 388 154 0 0 chr13 50820541 50820606 -69463706 + Lx2B LINE L1 2541 2605 -3281 2 972 2142 195 18 20 chr13 50820600 50821098 -69463214 + MusHAL1 LINE L1 1599 2095 -617 2 972 9056 133 11 11 chr13 50821095 50823406 -69460906 + L1_Mus3 LINE L1 4312 6622 -16 3 972 4487 16 0 0 chr13 50823406 50823899 -69460413 + MT2_Mm LTR ERVL 1 493 0 3 972 7019 107 11 15 chr13 50823899 50823915 -69460397 + L1_Mus3 LINE L1 6623 6633 -5 3 972 8031 173 98 46 chr13 50823909 50825871 -69458441 + Lx2B LINE L1 3297 5361 -516 2 972 6398 19 1 1 chr13 50825890 50826643 -69457669 + L1Md_A LINE L1 30 782 -5942 3 972 2230 115 15 6 chr13 50826643 50826976 -69457336 - IAPLTR1a_Mm LTR ERVK -1 336 1 3 972 7283 34 3 11 chr13 50826976 50827834 -69456478 - IAPEz-int LTR ERVK 0 6481 5630 3 972 13426 52 83 19 chr13 50827820 50830704 -69453608 - IAPEz-int LTR ERVK -3405 3076 8 3 972 2242 114 15 6 chr13 50830704 50831038 -69453274 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 972 38035 5 0 0 chr13 50831038 50836244 -69448068 + L1Md_A LINE L1 380 5586 -297 3 972 9208 3 0 0 chr13 50836244 50837240 -69447072 + L1Md_A LINE L1 5587 6582 0 3 972 25020 191 50 30 chr13 50837240 50838817 -69445495 + Lx2B LINE L1 5573 7000 0 2 972 297 0 0 0 chr13 50838923 50838956 -69445356 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 972 252 28 108 27 chr13 50839938 50839975 -69444337 + L1Md_Gf LINE L1 67 106 -6416 3 972 637 189 15 0 chr13 50839975 50840107 -69444205 + RMER4B LTR ERVK 452 585 0 3 972 304 294 314 51 chr13 50843467 50843761 -69440551 + ORR1E LTR MaLR 3 373 -6 3 972 473 268 9 0 chr13 50844084 50844196 -69440116 - B1_Mur2 SINE Alu -25 124 12 3 972 220 333 52 17 chr13 50844098 50844214 -69440098 - B4 SINE B4 -93 199 80 3 972 1085 197 235 7 chr13 50844322 50844443 -69439869 - ORR1D1 LTR MaLR -3 371 229 3 972 213 39 0 0 chr13 50844443 50844469 -69439843 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 3 972 1085 197 235 7 chr13 50844469 50844649 -69439663 - ORR1D1 LTR MaLR -146 228 1 3 972 308 306 49 18 chr13 50844787 50844950 -69439362 - L1M2 LINE L1 -2992 3151 2984 3 972 387 0 0 0 chr13 50850244 50850287 -69434025 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 972 309 323 115 23 chr13 50850651 50851037 -69433275 + L1M2 LINE L1 4910 5359 -784 3 973 603 0 0 0 chr13 50857828 50857895 -69426417 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 973 1461 145 51 15 chr13 50858878 50859151 -69425161 + ORR1B2 LTR MaLR 2 284 -83 3 973 284 230 97 134 chr13 50860659 50860842 -69423470 - MER57C2 LTR ERV1 -170 241 51 3 973 520 114 0 0 chr13 50861352 50861431 -69422881 + RLTR24 LTR ERV1 451 529 0 3 973 311 195 114 78 chr13 50861438 50861491 -69422821 + L1M4c LINE L1 1422 1472 -4912 3 973 370 257 36 9 chr13 50861491 50861601 -69422711 - PB1D7 SINE Alu -3 117 5 3 973 311 195 114 78 chr13 50861601 50861714 -69422598 + L1M4c LINE L1 1473 1593 -4791 3 973 219 167 0 0 chr13 50862042 50862084 -69422228 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 3 973 384 71 0 0 chr13 50862087 50862143 -69422169 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 973 243 0 0 0 chr13 50862143 50862170 -69422142 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 973 214 192 115 0 chr13 50863097 50863149 -69421163 - B1_Mur3 SINE Alu -13 136 79 3 973 438 215 99 52 chr13 50863176 50863348 -69420964 - Lx4B LINE L1 -1 7057 6878 3 973 308 88 26 117 chr13 50863325 50863402 -69420910 - Lx4B LINE L1 -895 6163 6094 3 973 13425 174 17 30 chr13 50863389 50864073 -69420239 - L1_Mur2 LINE L1 -1941 3936 3245 3 973 210 37 0 0 chr13 50864073 50864100 -69420212 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 973 13425 174 17 30 chr13 50864100 50865281 -69419031 - L1_Mur2 LINE L1 -2633 3244 2048 3 973 405 0 0 0 chr13 50865281 50865326 -69418986 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 973 13425 174 17 30 chr13 50865326 50865932 -69418380 - L1_Mur2 LINE L1 -3830 2047 1499 3 973 4533 52 2 2 chr13 50865932 50866488 -69417824 - L1Md_F2 LINE L1 0 6582 6027 3 973 13425 175 28 26 chr13 50866488 50867116 -69417196 - L1_Mur2 LINE L1 -4379 1498 863 3 973 609 124 26 0 chr13 50867496 50867609 -69416703 + URR1B DNA MER1_type 110 225 0 3 973 241 206 43 14 chr13 50867681 50867750 -69416562 - RLTR13D3 LTR ERVK -65 1049 979 3 973 305 298 23 2 chr13 50869014 50869145 -69415167 - PB1D10 SINE Alu 0 149 13 3 973 349 220 166 7 chr13 50869164 50869315 -69414997 - L1MC LINE L1 -2395 3751 3577 3 973 650 206 52 0 chr13 50869428 50869564 -69414748 + B1_Mur1 SINE Alu 2 144 -5 3 973 443 346 0 0 chr13 50869571 50869704 -69414608 + RSINE1 SINE B4 2 134 -31 3 973 423 0 0 0 chr13 50869708 50869755 -69414557 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 973 234 338 0 25 chr13 50869774 50869853 -69414459 + B4A SINE B4 214 290 -2 3 973 390 42 0 0 chr13 50869859 50869907 -69414405 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 973 222 219 35 47 chr13 50869936 50870022 -69414290 + GA-rich Low_complexity Low_complexity 5 89 0 3 973 21 71 0 0 chr13 50871406 50871448 -69412864 + AT_rich Low_complexity Low_complexity 1 42 0 3 973 243 288 80 58 chr13 50872343 50872531 -69411781 - RLTR15 LTR ERVK -117 242 51 3 973 1676 124 14 0 chr13 50873802 50874084 -69410228 + MusHAL1 LINE L1 1437 1722 -990 3 973 4000 170 33 18 chr13 50874085 50874912 -69409400 + L1_Mur1 LINE L1 3405 4243 -1643 3 973 588 197 8 0 chr13 50877399 50877516 -69406796 - B3 SINE B2 -98 118 1 3 973 1031 169 33 0 chr13 50877735 50877918 -69406394 - B2_Mm2 SINE B2 -6 189 1 3 973 236 261 0 0 chr13 50878296 50878361 -69405951 - L1M5 LINE L1 -1803 4343 4279 3 973 219 200 30 30 chr13 50878558 50878625 -69405687 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 973 329 263 122 29 chr13 50880392 50880630 -69403682 + L1MD LINE L1 3385 3676 -2470 3 973 430 344 8 0 chr13 50880650 50880778 -69403534 + RSINE1 SINE B4 23 151 -14 3 973 693 40 0 29 chr13 50881410 50881514 -69402798 + (GGA)n Simple_repeat Simple_repeat 2 102 0 3 973 321 146 22 89 chr13 50883785 50883800 -69400512 + ID_B1 SINE B4 141 223 0 3 973 567 0 14 0 chr13 50883800 50883874 -69400438 + B1_Mus2 SINE Alu 73 147 0 3 973 889 77 106 15 chr13 50883938 50884070 -69400242 + B1_Mus1 SINE Alu 1 144 -4 3 973 837 30 0 0 chr13 50884072 50884172 -69400140 + (GAA)n Simple_repeat Simple_repeat 2 101 0 3 973 305 299 25 8 chr13 50884402 50884520 -69399792 + L1MA4 LINE L1 5813 5932 -368 3 973 559 273 47 27 chr13 50888010 50888266 -69396046 + RCHARR1 DNA MER1_type 713 973 -1 3 973 1862 306 58 20 chr13 50888872 50889615 -69394697 + Lx6 LINE L1 6633 7403 -57 3 973 414 330 48 79 chr13 50889704 50890427 -69393885 + L1M2 LINE L1 2542 3243 -2900 3 973 1400 87 11 0 chr13 50890427 50890612 -69393700 + B2_Mm1t SINE B2 2 188 -5 3 973 414 330 48 79 chr13 50890612 50890776 -69393536 + L1M2 LINE L1 3244 3402 -2741 3 973 444 261 13 74 chr13 50890803 50890952 -69393360 + B1_Mur1 SINE Alu 2 141 -8 3 973 462 302 63 34 chr13 50890963 50891138 -69393174 + B3A SINE B2 4 183 -15 3 973 479 322 11 11 chr13 50891141 50891323 -69392989 + L1M2 LINE L1 3930 4111 -2032 3 973 3123 201 21 16 chr13 50891328 50892255 -69392057 + L1_Mur2 LINE L1 1026 2019 -3858 3 973 399 56 0 0 chr13 50892300 50892354 -69391958 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 973 533 274 71 6 chr13 50892375 50892544 -69391768 - MurERV4_19-int LTR ERVK -436 5344 5165 3 973 1630 188 36 3 chr13 50892546 50892904 -69391408 - MurERV4_19-int LTR ERVK -521 5259 4890 3 973 816 228 101 0 chr13 50892908 50893145 -69391167 + RMER19A LTR ERVK 477 737 0 3 973 2243 184 101 13 chr13 50893700 50894223 -69390089 + RMER4B LTR ERVK 12 580 -5 3 973 289 299 46 9 chr13 50896144 50896252 -69388060 - RMER15 LTR ERVL 0 575 464 3 973 227 223 154 91 chr13 50896251 50896394 -69387918 - RMER15 LTR ERVL -392 183 32 3 973 740 159 27 7 chr13 50896451 50896597 -69387715 + URR1A DNA MER1_type 58 206 -20 3 973 216 102 98 39 chr13 50896688 50896739 -69387573 - MIR3 SINE MIR -53 155 102 3 973 210 105 0 0 chr13 50896872 50896910 -69387402 + (GTTTG)n Simple_repeat Simple_repeat 5 42 0 3 973 308 324 51 56 chr13 50897081 50897297 -69387015 - L1MA5 LINE L1 -275 6025 5811 3 973 30 27 0 0 chr13 50897726 50897763 -69386549 + AT_rich Low_complexity Low_complexity 1 37 0 3 973 855 304 22 8 chr13 50897863 50898131 -69386181 - Lx9 LINE L1 -195 7449 7178 3 973 750 267 66 23 chr13 50898136 50898393 -69385919 - Lx9 LINE L1 -685 6959 6692 3 973 41620 11 1 6 chr13 50898396 50904589 -69379723 - L1Md_A LINE L1 0 6582 423 3 973 954 311 25 0 chr13 50904602 50904879 -69379433 - Lx9 LINE L1 -969 6675 6392 3 973 474 33 0 0 chr13 50912376 50912436 -69371876 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 973 21 0 0 0 chr13 50913228 50913249 -69371063 + AT_rich Low_complexity Low_complexity 1 21 0 3 973 315 0 0 0 chr13 50913765 50913800 -69370512 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 3 973 883 103 29 0 chr13 50913800 50913931 -69370381 - B1_Mus1 SINE Alu -8 140 6 3 973 629 236 35 65 chr13 50914260 50914459 -69369853 + B3A SINE B2 5 197 -1 3 973 706 207 27 14 chr13 50914461 50914608 -69369704 + B1_Mur4 SINE Alu 1 149 -1 3 973 2157 146 50 14 chr13 50915061 50915422 -69368890 + ORR1C1 LTR MaLR 1 374 -4 3 973 494 0 33 0 chr13 50915610 50915671 -69368641 + (TTATA)n Simple_repeat Simple_repeat 5 67 0 3 973 2975 58 8 0 chr13 50916004 50916380 -69367932 - L1Md_F2 LINE L1 -2 6580 6202 3 973 203 200 0 18 chr13 50916864 50916920 -69367392 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 973 348 178 0 0 chr13 50917905 50917978 -69366334 + (CA)n Simple_repeat Simple_repeat 1 73 0 3 973 217 257 18 73 chr13 50918009 50918118 -69366194 - MIR SINE MIR -29 233 131 3 973 425 234 29 53 chr13 50919351 50919522 -69364790 - MER44D DNA MER2_type -52 653 487 3 973 987 347 80 32 chr13 50919656 50919856 -69364456 - MER44D DNA MER2_type -1 704 506 3 973 889 158 0 20 chr13 50919856 50920005 -69364307 + B1_Mus2 SINE Alu 2 147 0 3 973 987 347 80 32 chr13 50920005 50920457 -69363855 - MER44D DNA MER2_type -200 505 21 3 973 321 212 60 11 chr13 50920766 50920867 -69363445 - L1MA5A LINE L1 -403 5894 5789 3 973 288 292 0 0 chr13 50922446 50922518 -69361794 + ID4_ SINE ID 1 72 -11 3 973 523 281 56 15 chr13 50922740 50922935 -69361377 - B3 SINE B2 -13 203 1 3 973 596 223 262 46 chr13 50923705 50923945 -69360367 - B4A SINE B4 0 292 1 3 973 470 234 83 88 chr13 50924008 50924200 -69360112 - B3A SINE B2 -3 192 2 3 973 211 184 20 20 chr13 50924205 50924255 -69360057 + CT-rich Low_complexity Low_complexity 3 52 0 3 973 609 188 54 0 chr13 50924270 50924382 -69359930 + B1_Mur1 SINE Alu 32 149 0 3 973 2692 194 14 16 chr13 50925954 50926458 -69357854 + Lx5 LINE L1 6548 7050 0 3 973 431 154 103 51 chr13 50927269 50927387 -69356925 + RMER4B LTR ERVK 1 131 -454 3 973 1192 163 0 0 chr13 50927388 50927584 -69356728 + RMER4B LTR ERVK 390 585 0 3 973 782 322 7 26 chr13 50928190 50928461 -69355851 + B4A SINE B4 9 274 -18 3 973 253 244 90 25 chr13 50929948 50930048 -69354264 + PB1 SINE Alu 17 120 -7 4 973 302 239 0 29 chr13 50930056 50930125 -69354187 + ID2 SINE ID 1 67 -16 4 973 255 312 68 105 chr13 50930499 50930689 -69353623 - MER77 LTR ERVL -208 399 217 4 973 432 0 0 0 chr13 50931101 50931149 -69353163 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 973 423 87 0 0 chr13 50931149 50931217 -69353095 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 973 377 148 12 0 chr13 50931224 50931305 -69353007 + CT-rich Low_complexity Low_complexity 1 82 0 4 973 518 29 15 0 chr13 50931498 50931566 -69352746 + (TAAAA)n Simple_repeat Simple_repeat 2 70 0 4 973 1139 267 114 14 chr13 50932128 50932496 -69351816 + MTD LTR MaLR 1 405 -14 4 973 37664 28 1 7 chr13 50933367 50938555 -69345757 + L1Md_A LINE L1 440 5586 -297 4 973 8395 41 0 1 chr13 50938555 50939552 -69344760 + L1Md_A LINE L1 5587 6582 0 4 973 1828 211 85 13 chr13 50941121 50941592 -69342720 + RLTR16 LTR ERVK 1 505 0 4 973 567 207 9 0 chr13 50941650 50941766 -69342546 - B3 SINE B2 -99 117 1 4 973 3562 43 16 16 chr13 50941779 50942232 -69342080 - L1Md_F2 LINE L1 0 6582 6130 4 973 374 39 19 0 chr13 50943093 50943145 -69341167 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 973 2385 162 28 19 chr13 50943805 50944278 -69340034 + L1_Mur2 LINE L1 3818 4294 -1583 4 973 234 170 0 0 chr13 50944285 50944332 -69339980 - RMER19B LTR ERVK -13 889 843 4 973 2488 222 86 8 chr13 50944331 50944984 -69339328 - RMER19B LTR ERVK -192 710 7 4 973 1022 232 74 35 chr13 50945011 50945473 -69338839 - MurERV4_19-int LTR ERVK -1 5779 5174 4 973 2414 215 38 84 chr13 50948075 50948918 -69335394 + RLTR22_Mur LTR ERVK 1 804 -1044 4 973 240 254 15 0 chr13 50949386 50949453 -69334859 + L1M4b LINE L1 2727 2794 -4540 4 973 25 0 0 0 chr13 50949736 50949761 -69334551 + AT_rich Low_complexity Low_complexity 1 25 0 4 973 632 130 0 16 chr13 50950191 50950316 -69333996 + (GGGA)n Simple_repeat Simple_repeat 4 126 0 4 973 216 184 70 20 chr13 50951052 50951152 -69333160 + (TA)n Simple_repeat Simple_repeat 2 106 0 4 973 841 195 119 5 chr13 50951741 50951942 -69332370 + URR1A DNA MER1_type 3 226 0 4 973 387 0 0 0 chr13 50953680 50953723 -69330589 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 973 368 257 96 22 chr13 50953804 50954020 -69330292 + L1_Mur3 LINE L1 3449 3675 -2471 4 973 404 331 8 23 chr13 50954020 50954150 -69330162 + RSINE1 SINE B4 9 136 -29 4 973 286 274 31 61 chr13 50954184 50954347 -69329965 + L1M2 LINE L1 3691 3848 -2295 4 973 344 280 22 43 chr13 50955801 50955939 -69328373 - L1_Rod LINE L1 -211 5636 5502 4 973 301 298 0 0 chr13 50955956 50956050 -69328262 - ID_B1 SINE B4 0 224 131 4 973 373 222 77 95 chr13 50956205 50956374 -69327938 + ID_B1 SINE B4 51 216 -8 4 973 24 0 0 0 chr13 50956633 50956657 -69327655 + AT_rich Low_complexity Low_complexity 1 24 0 4 973 727 145 18 24 chr13 50957426 50957456 -69326856 + polypurine Low_complexity Low_complexity 1 30 0 4 973 978 130 11 6 chr13 50957456 50957634 -69326678 + (GGAGAA)n Simple_repeat Simple_repeat 1 179 0 4 973 727 145 18 24 chr13 50957634 50957698 -69326614 + polypurine Low_complexity Low_complexity 31 93 0 4 973 1490 17 6 0 chr13 50957698 50957875 -69326437 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 4 973 727 145 18 24 chr13 50957875 50957948 -69326364 + polypurine Low_complexity Low_complexity 94 168 0 4 973 359 219 7 0 chr13 50958112 50958249 -69326063 + (CA)n Simple_repeat Simple_repeat 2 139 0 4 973 567 0 0 0 chr13 50958702 50958765 -69325547 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 973 827 19 0 0 chr13 50960102 50960209 -69324103 - L1Md_T LINE L1 -1 6581 6475 4 973 2507 21 0 0 chr13 50960209 50960488 -69323824 + L1Md_T LINE L1 6174 6452 -130 4 973 1158 87 6 0 chr13 50962421 50962582 -69321730 + L1_Mur1 LINE L1 2445 2606 -3280 4 973 1160 158 0 31 chr13 50962575 50962803 -69321509 + MusHAL1 LINE L1 1599 1819 -893 4 973 11873 38 20 3 chr13 50962807 50964224 -69320088 + IAPLTR4_I LTR ERVK 30 1470 0 4 973 329 183 0 115 chr13 50964224 50964323 -69319989 + MMERVK10C-int LTR ERVK 869 952 -6629 4 973 1299 214 107 53 chr13 50964433 50964880 -69319432 + RMER16-int LTR ERVK 251 623 -4783 4 973 460 197 102 8 chr13 50964923 50965041 -69319271 + RLTR45-int LTR ERVK 1721 1849 -5557 4 973 304 279 0 55 chr13 50965052 50965143 -69319169 + RLTR45-int LTR ERVK 2454 2539 -4867 4 973 1015 103 0 18 chr13 50965151 50965319 -69318993 + RLTR45-int LTR ERVK 2732 2896 -2912 4 973 37050 40 8 1 chr13 50965319 50970483 -69313829 + L1Md_T LINE L1 444 5586 -297 4 973 8566 33 0 1 chr13 50970483 50971478 -69312834 + L1Md_T LINE L1 5587 6580 -2 4 973 6106 83 58 16 chr13 50971482 50972445 -69311867 + RLTR45-int LTR ERVK 3555 4596 -2648 4 973 1442 164 136 4 chr13 50972416 50972680 -69311632 + RLTR45-int LTR ERVK 3973 4271 -3135 4 973 505 185 12 35 chr13 50972685 50972810 -69311502 + MMETn-int LTR ERVK 2357 2464 -2380 4 973 866 81 35 49 chr13 50972822 50972965 -69311347 + IAPLTR3-int LTR ERVK 4530 4670 -2911 4 973 6386 248 50 41 chr13 50973085 50975601 -69308711 + IAPLTR3-int LTR ERVK 5064 7329 -351 4 973 1436 140 145 10 chr13 50975601 50975905 -69308407 + IAPLTR4 LTR ERVK 1 345 0 4 973 3924 151 15 9 chr13 50975908 50976643 -69307669 + L1_Mur1 LINE L1 3023 3761 -2125 4 973 1151 242 106 0 chr13 50976642 50976935 -69307377 + Lx5 LINE L1 6727 7050 0 4 973 643 299 136 22 chr13 50977278 50977691 -69306621 + L1_Mur3 LINE L1 5231 5690 -190 4 973 380 263 26 147 chr13 50977860 50978016 -69306296 + L1VL1 LINE L1 221 357 -6065 4 973 397 276 15 15 chr13 50978097 50978233 -69306079 + L1VL4 LINE L1 578 713 -5806 4 973 2403 150 16 78 chr13 50978234 50978990 -69305322 + L1VL4 LINE L1 628 1329 -2488 4 973 7121 83 32 2 chr13 50978991 50980012 -69304300 + L1_Mus2 LINE L1 5519 6565 -1 4 973 1449 272 75 47 chr13 50980329 50980982 -69303330 + RMER19A LTR ERVK 9 611 0 4 973 438 69 0 0 chr13 50981542 50981600 -69302712 + (TA)n Simple_repeat Simple_repeat 1 58 0 4 973 1644 247 98 8 chr13 50981600 50982069 -69302243 + RMER4B LTR ERVK 75 585 0 4 974 399 21 0 0 chr13 50987575 50987623 -69296689 + (TC)n Simple_repeat Simple_repeat 2 49 0 4 974 452 32 16 0 chr13 50987624 50987686 -69296626 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 974 238 314 35 0 chr13 50987938 50988024 -69296288 + RMER15 LTR ERVL 393 481 -94 4 974 962 284 65 15 chr13 50988372 50988697 -69295615 - RMER20B LTR ERVK -262 365 25 4 974 38695 30 0 0 chr13 50988738 50995190 -69289122 - L1Md_T LINE L1 0 6585 38 4 974 347 128 7 7 chr13 50995859 50995933 -69288379 + B1_Mus1 SINE Alu 1 74 -221 4 974 811 149 40 40 chr13 50995934 50996109 -69288203 + L1_Mur2 LINE L1 3781 3955 -1922 4 974 1343 168 47 32 chr13 50996109 50996131 -69288181 + L1_Mur2 LINE L1 3815 3834 -2043 4 974 5119 123 26 13 chr13 50996131 50996924 -69287388 + Lx LINE L1 5849 6652 -2 4 974 1343 168 47 32 chr13 50996924 50997239 -69287073 + L1_Mur2 LINE L1 3835 4157 -1720 4 974 2666 194 105 8 chr13 50997241 50997899 -69286413 - RMER19B LTR ERVK -173 729 8 4 974 5754 80 39 6 chr13 50997939 50999389 -69284923 + L1VL2 LINE L1 335 1826 -1789 4 974 288 286 0 42 chr13 50999528 50999623 -69284689 - PB1D10 SINE Alu 0 117 27 4 974 602 102 0 10 chr13 50999809 50999908 -69284404 - BC1_Mm scRNA scRNA -54 98 1 4 974 252 86 0 0 chr13 51000087 51000122 -69284190 + (T)n Simple_repeat Simple_repeat 1 35 0 1 974 1012 129 0 26 chr13 51000122 51000273 -69284039 - B1_Mus1 SINE Alu 0 148 2 2 974 267 188 78 0 chr13 51000922 51000986 -69283326 + L1M2 LINE L1 2745 2813 -3330 3 974 1288 254 87 101 chr13 51000994 51001876 -69282436 - MurERV4_19-int LTR ERVK -17 5763 4894 4 974 344 284 16 9 chr13 51001876 51001984 -69282328 + RMER19A LTR ERVK 371 575 -162 5 974 4030 124 115 31 chr13 51001995 51002834 -69281478 + RLTR13D6 LTR ERVK 1 1023 0 6 974 658 210 49 0 chr13 51002842 51003004 -69281308 + RMER19A LTR ERVK 568 737 0 5 974 3291 180 33 29 chr13 51007158 51007954 -69276358 + RLTR22_Mur LTR ERVK 1 799 -1049 7 974 305 303 52 71 chr13 51008114 51008324 -69275988 + RMER12 LTR ERVK 1100 1305 -17 8 974 614 13 13 0 chr13 51009120 51009195 -69275117 + (GGGA)n Simple_repeat Simple_repeat 3 78 0 9 974 499 142 67 20 chr13 51009720 51009826 -69274486 + L1_Mus4 LINE L1 5809 5919 -261 1 974 37581 27 0 7 chr13 51010239 51015397 -69268915 + L1Md_T LINE L1 468 5586 -297 1 974 8588 35 0 0 chr13 51015397 51016393 -69267919 + L1Md_T LINE L1 5587 6582 0 1 974 225 108 0 0 chr13 51016474 51016511 -69267801 + B2_Mm2 SINE B2 2 38 -157 1 974 267 188 29 14 chr13 51016798 51016868 -69267444 + RLTR13D3 LTR ERVK 983 1053 -61 1 974 5024 102 32 7 chr13 51016924 51017665 -69266647 + L1_Mus4 LINE L1 5877 6636 0 1 974 188 232 0 35 chr13 51018043 51018101 -69266211 + L3 LINE CR1 2339 2394 -2095 1 974 717 97 0 0 chr13 51018233 51018336 -69265976 + (CAGAGA)n Simple_repeat Simple_repeat 4 106 0 1 974 850 199 114 5 chr13 51018931 51019133 -69265179 + URR1A DNA MER1_type 3 226 0 1 974 13909 99 16 9 chr13 51024305 51027055 -69257257 + L1VL2 LINE L1 213 2980 -635 1 974 30 77 0 0 chr13 51027593 51027658 -69256654 + AT_rich Low_complexity Low_complexity 1 65 0 1 974 1228 135 0 5 chr13 51027900 51028094 -69256218 + B2_Mm2 SINE B2 2 194 -1 2 974 511 278 61 13 chr13 51028184 51028414 -69255898 + L1M4 LINE L1 3435 3675 -2471 2 974 497 309 22 0 chr13 51028426 51028562 -69255750 + RSINE1 SINE B4 15 153 -12 2 974 900 128 35 21 chr13 51028797 51028941 -69255371 + B1_Mus2 SINE Alu 1 146 -1 2 974 236 309 36 0 chr13 51028949 51029059 -69255253 + L1M1 LINE L1 5814 5927 -376 2 974 924 64 63 8 chr13 51030000 51030126 -69254186 + B1_Mm SINE Alu 5 137 -10 2 974 210 37 0 0 chr13 51030126 51030153 -69254159 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 974 293 335 65 16 chr13 51030678 51030858 -69253454 - Lx9 LINE L1 -1108 6536 6262 2 974 441 0 0 0 chr13 51030916 51030965 -69253347 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 974 1782 131 33 14 chr13 51031015 51031372 -69252940 - ORR1A4 LTR MaLR 0 394 2 2 974 2938 71 57 7 chr13 51032680 51033105 -69251207 - L1_Mus3 LINE L1 0 6638 6193 3 974 308 151 0 0 chr13 51033110 51033163 -69251149 + B1_Mus2 SINE Alu 91 143 -4 3 974 2196 282 116 36 chr13 51033163 51034123 -69250189 + Lx8 LINE L1 6404 7439 -34 3 974 973 70 70 0 chr13 51034145 51034274 -69250038 + B1_Mus1 SINE Alu 3 140 -8 3 974 288 0 0 0 chr13 51034274 51034306 -69250006 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 974 672 292 32 16 chr13 51034504 51034751 -69249561 + MTE-int LTR MaLR 778 1028 -552 3 974 2256 165 112 22 chr13 51036709 51037199 -69247113 - RMER4B LTR ERVK 0 585 52 3 974 4525 53 2 5 chr13 51037199 51037770 -69246542 - L1Md_F2 LINE L1 -3 6579 6011 3 974 22 0 0 0 chr13 51037791 51037813 -69246499 + AT_rich Low_complexity Low_complexity 1 22 0 3 974 243 0 0 0 chr13 51037843 51037870 -69246442 + (A)n Simple_repeat Simple_repeat 1 27 0 3 974 874 231 15 0 chr13 51038399 51038598 -69245714 - RMER19A LTR ERVK 0 737 536 4 974 2718 148 52 98 chr13 51038638 51039452 -69244860 + MurERV4_19-int LTR ERVK 4890 5780 0 4 974 4248 157 89 2 chr13 51039452 51040271 -69244041 + RMER19B LTR ERVK 1 890 -12 4 974 4470 154 15 47 chr13 51040283 51040782 -69243530 - L1_Mur2 LINE L1 -1583 4294 3816 4 974 1226 54 0 0 chr13 51040782 51040929 -69243383 - B1_Mm SINE Alu 0 147 1 4 974 4470 154 15 47 chr13 51040929 51041278 -69243034 - L1_Mur2 LINE L1 -2062 3815 3473 4 974 1317 61 0 0 chr13 51041491 51041671 -69242641 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 974 871 92 0 44 chr13 51042712 51042834 -69241478 - MTB_Mm LTR MaLR 0 407 287 4 974 2944 60 50 3 chr13 51042834 51043216 -69241096 + MTB LTR MaLR 1 400 0 4 974 871 92 0 44 chr13 51043216 51043230 -69241082 - MTB_Mm LTR MaLR -121 286 277 4 974 4079 99 21 1 chr13 51043218 51043915 -69240397 - MTB_Mm-int LTR MaLR -604 1359 1 4 974 2848 78 12 68 chr13 51043915 51044344 -69239968 - MTB_Mm LTR MaLR 0 407 3 4 974 339 213 45 45 chr13 51044383 51044560 -69239752 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 4 974 517 259 42 0 chr13 51044576 51044719 -69239593 - B1F SINE Alu 0 149 1 4 974 408 270 11 0 chr13 51044727 51044816 -69239496 - PB1 SINE Alu -36 91 2 5 974 927 163 33 17 chr13 51046587 51046768 -69237544 + ORR1A4 LTR MaLR 1 184 -145 5 974 319 253 13 0 chr13 51046780 51046855 -69237457 + ID SINE ID 5 80 -144 5 974 403 291 167 38 chr13 51047192 51047564 -69236748 - L1MA4 LINE L1 -446 5854 5435 5 974 439 288 0 0 chr13 51047589 51047700 -69236612 - PB1D7 SINE Alu -9 111 1 5 974 2067 97 14 81 chr13 51048073 51048421 -69235891 - ORR1A4 LTR MaLR 0 329 5 5 974 349 284 42 0 chr13 51048422 51048517 -69235795 + B1F SINE Alu 32 130 -19 5 974 731 217 83 26 chr13 51048591 51048747 -69235565 - RSINE1 SINE B4 0 165 1 5 974 903 219 48 5 chr13 51049196 51049402 -69234910 + B3 SINE B2 2 216 0 5 974 368 143 208 0 chr13 51049427 51049504 -69234808 + B3 SINE B2 2 94 -122 5 974 252 0 0 0 chr13 51049540 51049568 -69234744 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 974 292 196 128 49 chr13 51049689 51049791 -69234521 - ORR1E LTR MaLR 0 379 270 6 974 670 194 15 7 chr13 51049783 51049918 -69234394 + B1_Mur2 SINE Alu 8 143 -6 6 974 1163 47 0 26 chr13 51049941 51050093 -69234219 + B1_Mus1 SINE Alu 1 148 0 6 974 945 228 33 58 chr13 51050101 51050376 -69233936 - ORR1E LTR MaLR -86 273 6 6 974 616 283 58 0 chr13 51051275 51051466 -69232846 - B3 SINE B2 -6 210 9 6 974 1486 188 46 55 chr13 51051903 51052207 -69232105 + Lx7 LINE L1 7374 7675 -21 6 974 1244 91 102 6 chr13 51052207 51052223 -69232089 - B2_Mm2 SINE B2 -2 193 178 6 974 351 0 0 0 chr13 51052223 51052262 -69232050 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 6 974 1244 91 102 6 chr13 51052262 51052421 -69231891 - B2_Mm2 SINE B2 -18 177 1 6 974 1486 188 46 55 chr13 51052421 51052442 -69231870 + Lx7 LINE L1 7676 7696 0 6 974 270 56 0 0 chr13 51052630 51052666 -69231646 + (TTGG)n Simple_repeat Simple_repeat 1 36 0 6 974 455 151 33 55 chr13 51052666 51052757 -69231555 - PB1D9 SINE Alu -13 107 19 6 974 1213 61 0 0 chr13 51052923 51053071 -69231241 - B1_Mus1 SINE Alu 0 148 1 7 974 464 291 25 0 chr13 51053095 51053253 -69231059 - RSINE1 SINE B4 -3 162 1 7 974 445 256 0 16 chr13 51053253 51053380 -69230932 - ID_B1 SINE B4 -1 223 99 7 974 542 246 57 52 chr13 51054267 51054460 -69229852 - B3A SINE B2 0 198 5 7 974 368 225 0 0 chr13 51054479 51054550 -69229762 - ID2 SINE ID -10 73 3 7 974 212 146 36 0 chr13 51054856 51054911 -69229401 + (CAGAGA)n Simple_repeat Simple_repeat 6 62 0 7 974 306 164 0 0 chr13 51054910 51054965 -69229347 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 7 974 1097 225 224 55 chr13 51054969 51055272 -69229040 + L1MC1 LINE L1 4434 4804 -1342 7 974 492 18 0 0 chr13 51055272 51055329 -69228983 + (TGAA)n Simple_repeat Simple_repeat 4 60 0 7 974 1097 225 224 55 chr13 51055329 51055642 -69228670 + L1MC1 LINE L1 4805 5153 -993 7 974 1022 54 40 0 chr13 51055653 51055801 -69228511 + ORR1A1 LTR MaLR 141 294 -52 7 974 469 281 166 39 chr13 51055818 51056077 -69228235 + B4 SINE B4 1 292 0 8 974 348 345 49 49 chr13 51056118 51056365 -69227947 + L1MD LINE L1 5145 5391 -755 8 974 438 293 150 50 chr13 51056403 51056762 -69227550 + L1MC1 LINE L1 5455 5849 -484 7 974 428 179 110 30 chr13 51056769 51056892 -69227420 + B1_Mm SINE Alu 32 147 -2 8 974 237 258 30 54 chr13 51056935 51057040 -69227272 + L1MC1 LINE L1 5887 5988 -345 7 974 1275 97 11 0 chr13 51057040 51057216 -69227096 + B2_Mm1t SINE B2 2 179 -14 8 974 234 260 22 102 chr13 51057216 51057247 -69227065 + L1MC1 LINE L1 5989 6012 -321 7 974 26 0 0 0 chr13 51057304 51057330 -69226982 + AT_rich Low_complexity Low_complexity 1 26 0 8 974 288 0 0 0 chr13 51057824 51057856 -69226456 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 8 974 1260 20 7 0 chr13 51057970 51058116 -69226196 - B1_Mus2 SINE Alu 0 147 1 8 974 1073 126 0 6 chr13 51058229 51058360 -69225952 + (TTCC)n Simple_repeat Simple_repeat 1 131 0 8 974 1200 111 0 0 chr13 51058360 51058540 -69225772 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 8 974 1214 101 5 1 chr13 51058540 51058763 -69225549 + (TTCC)n Simple_repeat Simple_repeat 1 223 0 8 974 644 212 169 26 chr13 51058774 51058963 -69225349 - ID_B1 SINE B4 -8 216 1 9 974 360 0 0 0 chr13 51058983 51059023 -69225289 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 974 418 241 74 16 chr13 51059034 51059052 -69225260 - PB1D7 SINE Alu -8 141 109 9 974 312 164 0 52 chr13 51059052 51059110 -69225202 - ID_B1 SINE B4 -2 222 168 9 974 418 241 74 16 chr13 51059110 51059156 -69225156 - PB1D7 SINE Alu -8 108 18 9 974 447 250 92 46 chr13 51059262 51059522 -69224790 - L1MDb LINE L1 -5018 1391 1120 9 974 571 241 50 56 chr13 51059558 51059738 -69224574 - B3A SINE B2 0 198 20 9 974 660 267 85 15 chr13 51059756 51060015 -69224297 - L1MDb LINE L1 -5320 1089 813 9 974 474 328 85 66 chr13 51060130 51060401 -69223911 + B4 SINE B4 4 279 -13 9 974 602 232 157 30 chr13 51060495 51060730 -69223582 + RLTR10A LTR ERVK 147 411 0 9 974 207 204 0 0 chr13 51060760 51060809 -69223503 + (ATG)n Simple_repeat Simple_repeat 3 51 0 9 974 635 263 83 6 chr13 51061602 51061759 -69222553 - B3 SINE B2 -1 215 47 9 974 3511 163 63 40 chr13 51062247 51062564 -69221748 + RLTR25A LTR ERVK 1 321 -782 1 974 1149 51 0 7 chr13 51062564 51062702 -69221610 + B1_Mus1 SINE Alu 2 138 -10 1 974 189 74 0 0 chr13 51062702 51062729 -69221583 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 974 3511 163 63 40 chr13 51062729 51062907 -69221405 + RLTR25A LTR ERVK 322 502 -601 1 974 243 0 0 0 chr13 51062907 51062934 -69221378 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 1 974 3511 163 63 40 chr13 51062934 51063118 -69221194 + RLTR25A LTR ERVK 503 696 -407 1 974 9887 146 42 2 chr13 51063118 51066000 -69218312 + Lx4A LINE L1 4038 7056 -2 1 974 2065 163 48 25 chr13 51066001 51066229 -69218083 + RLTR25B LTR ERVK 603 832 -196 1 974 519 60 0 0 chr13 51066229 51066296 -69218016 + (GA)n Simple_repeat Simple_repeat 1 67 0 1 974 2065 163 48 25 chr13 51066296 51066464 -69217848 + RLTR25B LTR ERVK 833 1008 -20 1 974 917 243 69 65 chr13 51067216 51067507 -69216805 + B4A SINE B4 1 292 0 1 974 463 248 0 38 chr13 51068139 51068244 -69216068 - PB1D10 SINE Alu -16 101 1 1 974 238 230 60 26 chr13 51068264 51068380 -69215932 + (CA)n Simple_repeat Simple_repeat 2 121 0 1 974 877 263 62 75 chr13 51069248 51069540 -69214772 + B4 SINE B4 4 291 -1 1 974 565 241 42 68 chr13 51070112 51070303 -69214009 + RLTR23 LTR ERV1 245 430 0 1 974 369 348 0 0 chr13 51070342 51070460 -69213852 - MER2 DNA MER2_type -13 332 215 1 974 486 0 0 0 chr13 51070460 51070514 -69213798 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 974 1131 253 9 30 chr13 51071021 51071277 -69213035 - MTD LTR MaLR -146 273 18 1 974 207 0 0 0 chr13 51071277 51071300 -69213012 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 974 346 51 102 0 chr13 51071451 51071510 -69212802 - B2_Mm1a SINE B2 -2 191 127 1 974 1253 107 11 0 chr13 51071542 51071719 -69212593 - B2_Mm1t SINE B2 -12 181 3 1 974 537 335 60 0 chr13 51071721 51071921 -69212391 - MER2 DNA MER2_type -133 212 1 1 974 278 349 30 8 chr13 51071984 51072117 -69212195 + MLT1E1 LTR MaLR 1 136 -424 1 974 401 279 134 64 chr13 51072314 51072486 -69211826 + MLT1E1 LTR MaLR 414 597 -57 1 974 31 0 0 0 chr13 51072489 51072520 -69211792 + AT_rich Low_complexity Low_complexity 1 31 0 1 974 315 280 76 54 chr13 51073247 51073432 -69210880 + RMER15 LTR ERVL 216 404 -171 1 974 298 268 177 40 chr13 51073534 51073709 -69210603 + RMER21B LTR ERV1 369 567 -275 1 974 293 219 25 76 chr13 51073774 51073853 -69210459 + RMER15 LTR ERVL 402 476 -99 1 974 377 206 132 4 chr13 51073900 51073992 -69210320 - B1F1 SINE Alu -20 107 1 1 974 540 132 0 0 chr13 51074122 51074198 -69210114 + B2_Mm2 SINE B2 15 90 -105 1 974 372 302 55 75 chr13 51074364 51074686 -69209626 - MLT2B1 LTR ERVL -58 509 82 1 974 21 36 0 0 chr13 51075033 51075061 -69209251 + AT_rich Low_complexity Low_complexity 1 28 0 1 974 617 200 45 15 chr13 51075098 51075230 -69209082 + RSINE1 SINE B4 30 165 0 1 974 225 316 80 14 chr13 51075657 51075795 -69208517 - LTR33 LTR ERVL -112 403 257 1 974 1140 74 0 13 chr13 51076109 51076259 -69208053 - B1_Mus1 SINE Alu 0 148 1 1 974 385 172 76 171 chr13 51076384 51076489 -69207823 + B1F2 SINE Alu 31 149 0 1 974 266 281 0 0 chr13 51076690 51076754 -69207558 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 974 368 271 106 8 chr13 51076755 51076878 -69207434 + MER82 DNA MER2_type 292 426 -227 1 974 494 237 10 0 chr13 51076900 51076997 -69207315 + B4A SINE B4 2 99 -193 1 974 403 176 14 0 chr13 51077705 51077779 -69206533 - HAL1-3A_ME LINE L1 -811 2047 1973 1 974 202 276 0 17 chr13 51077780 51077839 -69206473 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 974 230 319 14 0 chr13 51078010 51078082 -69206230 + C-rich Low_complexity Low_complexity 3 75 0 1 974 269 321 18 18 chr13 51078618 51078732 -69205580 - L1MC5 LINE L1 -532 7429 7316 1 974 419 233 93 0 chr13 51079156 51079242 -69205070 + PB1D10 SINE Alu 18 111 -6 1 974 253 241 52 61 chr13 51079246 51079361 -69204951 + Lx8 LINE L1 7358 7471 -2 1 974 289 310 0 0 chr13 51079424 51079495 -69204817 + B3 SINE B2 1 71 -145 1 974 1219 114 43 0 chr13 51079868 51080052 -69204260 + B2_Mm1t SINE B2 1 192 -1 1 974 234 0 0 0 chr13 51080230 51080256 -69204056 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 974 458 278 28 0 chr13 51080256 51080364 -69203948 - RSINE1 SINE B4 -25 140 30 1 974 856 185 171 16 chr13 51080556 51080684 -69203628 + B3 SINE B2 1 150 -66 1 974 276 100 0 0 chr13 51080684 51080724 -69203588 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 974 856 185 171 16 chr13 51080724 51080782 -69203530 + B3 SINE B2 151 215 -1 1 974 462 184 138 0 chr13 51080806 51080893 -69203419 + PB1D9 SINE Alu 9 107 -13 1 974 726 12 0 0 chr13 51080915 51080998 -69203314 + (GAA)n Simple_repeat Simple_repeat 2 84 0 1 974 414 0 0 0 chr13 51081114 51081160 -69203152 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1 974 1211 70 6 0 chr13 51081160 51081318 -69202994 - B2_Mm1a SINE B2 -33 160 2 1 974 729 245 81 84 chr13 51081428 51081726 -69202586 - Lx8 LINE L1 -4 7469 7173 1 974 7244 153 33 76 chr13 51081726 51083191 -69201121 - RMER12B LTR ERVK 0 1404 3 1 974 2797 271 44 57 chr13 51083192 51083569 -69200743 - Lx8 LINE L1 -340 7133 6758 1 974 5073 93 14 9 chr13 51083569 51084261 -69200051 - Lx2B LINE L1 -8 6992 6297 1 974 2797 271 44 57 chr13 51084261 51084614 -69199698 - Lx8 LINE L1 -716 6757 6407 1 974 4112 50 2 63 chr13 51084614 51085167 -69199145 - MURVY-LTR LTR ERV1 0 519 1 1 974 2797 271 44 57 chr13 51085167 51085368 -69198944 - Lx8 LINE L1 -1067 6406 6210 1 974 3549 77 6 13 chr13 51085368 51085845 -69198467 + MT2C_Mm LTR ERVL 1 474 -1 1 974 2797 271 44 57 chr13 51085845 51085907 -69198405 - Lx8 LINE L1 -1264 6209 6151 1 974 468 281 125 6 chr13 51086330 51086498 -69197814 - B4 SINE B4 -17 275 88 1 974 351 222 80 44 chr13 51087062 51087175 -69197137 - PB1D10 SINE Alu 0 117 1 1 974 24 32 0 0 chr13 51087707 51087738 -69196574 + AT_rich Low_complexity Low_complexity 1 31 0 1 974 263 212 12 0 chr13 51087968 51088048 -69196264 + CT-rich Low_complexity Low_complexity 2 82 0 1 974 182 62 31 0 chr13 51088241 51088273 -69196039 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1 974 505 275 7 47 chr13 51088288 51088437 -69195875 + B4 SINE B4 84 226 -66 1 974 246 288 55 0 chr13 51088448 51088521 -69195791 - AluG_3 SINE Alu -91 220 144 1 974 2985 58 59 16 chr13 51088729 51088911 -69195401 + MTB_Mm LTR MaLR 3 195 -212 1 974 1174 50 0 0 chr13 51088911 51089052 -69195260 + B1_Mus2 SINE Alu 1 141 -6 1 974 195 42 0 0 chr13 51089054 51089078 -69195234 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 1 974 2985 58 59 16 chr13 51089078 51089280 -69195032 + MTB_Mm LTR MaLR 196 407 0 1 974 400 307 0 0 chr13 51089392 51089480 -69194832 - RSINE1 SINE B4 0 165 78 1 974 263 308 0 0 chr13 51090118 51090183 -69194129 + tRNA-Ala-GCA tRNA tRNA 3 67 -8 1 974 1086 65 43 0 chr13 51090261 51090400 -69193912 - B1_Mus1 SINE Alu -2 146 2 1 974 612 27 0 0 chr13 51090533 51090607 -69193705 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 1 974 1354 46 52 0 chr13 51090607 51090780 -69193532 - B2_Mm2 SINE B2 -9 186 5 1 974 889 247 37 26 chr13 51091688 51091958 -69192354 - B4A SINE B4 -18 274 2 1 974 504 328 98 28 chr13 51092249 51092579 -69191733 + L1MA4A LINE L1 5510 5929 -374 1 974 350 217 8 0 chr13 51092581 51092701 -69191611 + (TG)n Simple_repeat Simple_repeat 2 122 0 1 974 1024 238 61 39 chr13 51092815 51093126 -69191186 - RMER15 LTR ERVL -12 563 246 1 974 411 365 72 30 chr13 51093409 51093672 -69190640 + HAL1 LINE L1 1262 1535 -972 1 974 372 290 20 0 chr13 51094200 51094300 -69190012 + B1F SINE Alu 42 143 -6 1 974 1027 89 0 7 chr13 51094308 51094444 -69189868 + B1_Mus1 SINE Alu 1 135 -13 1 974 210 37 0 0 chr13 51094444 51094471 -69189841 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1 974 822 191 13 20 chr13 51094646 51094796 -69189516 + B1_Mur1 SINE Alu 1 149 0 1 974 254 151 0 36 chr13 51094866 51094921 -69189391 + (CATA)n Simple_repeat Simple_repeat 2 54 0 1 974 671 244 14 115 chr13 51095241 51095459 -69188853 + MER82 DNA MER2_type 206 401 -252 1 974 321 283 54 70 chr13 51095670 51095799 -69188513 + RMER15 LTR ERVL 1 127 -448 1 974 429 290 133 28 chr13 51095869 51096050 -69188262 + RMER15 LTR ERVL 362 561 -14 1 974 2723 42 3 3 chr13 51096057 51096388 -69187924 - IAPEY_LTR LTR ERVK 0 385 55 1 974 21 0 0 0 chr13 51097204 51097225 -69187087 + AT_rich Low_complexity Low_complexity 1 21 0 1 974 245 27 54 0 chr13 51097311 51097348 -69186964 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1 974 222 118 0 0 chr13 51097403 51097437 -69186875 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 1 974 320 250 0 0 chr13 51097443 51097515 -69186797 - ID4 SINE ID -10 73 2 1 974 598 227 83 0 chr13 51097760 51097892 -69186420 + ID_B1 SINE B4 82 224 0 1 974 693 188 75 34 chr13 51097912 51098108 -69186204 + B3 SINE B2 1 191 -4 1 974 198 0 0 0 chr13 51098110 51098132 -69186180 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1 974 1016 49 0 0 chr13 51098161 51098283 -69186029 + B1_Mus1 SINE Alu 18 139 -9 1 974 188 34 0 33 chr13 51098283 51098313 -69185999 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 974 257 262 57 90 chr13 51098313 51098451 -69185861 + B3A SINE B2 29 194 -4 1 974 518 237 0 7 chr13 51098451 51098591 -69185721 + GA-rich Low_complexity Low_complexity 5 143 0 1 974 2590 177 28 60 chr13 51100238 51100767 -69183545 + RLTR18B LTR ERVK 1 512 0 1 974 406 301 35 0 chr13 51101594 51101707 -69182605 + MLT1B LTR MaLR 8 124 -266 1 974 335 276 73 45 chr13 51101699 51101809 -69182503 - ID_B1 SINE B4 -110 114 2 1 974 24 0 0 0 chr13 51101814 51101838 -69182474 + AT_rich Low_complexity Low_complexity 1 24 0 1 974 1177 84 78 0 chr13 51101838 51102004 -69182308 - B2_Mm2 SINE B2 -13 182 4 1 974 1166 82 7 0 chr13 51102054 51102200 -69182112 - B1_Mus1 SINE Alu 0 148 2 1 974 1570 261 82 62 chr13 51103416 51103819 -69180493 - MT2A LTR ERVL -20 513 93 1 974 1176 82 57 28 chr13 51103819 51103995 -69180317 - B2_Mm2 SINE B2 -14 181 1 2 974 1570 261 82 62 chr13 51103995 51104094 -69180218 - MT2A LTR ERVL -441 92 1 1 974 579 274 7 33 chr13 51104187 51104338 -69179974 + MTEa LTR MaLR 225 371 -8 2 974 1460 73 16 10 chr13 51104521 51104714 -69179598 - B2_Mm2 SINE B2 -1 194 1 2 974 2005 165 46 129 chr13 51104999 51105457 -69178855 - MTC LTR MaLR -1 420 1 2 974 1275 252 113 55 chr13 51105468 51105579 -69178733 + RMER5 LTR ERV1 21 153 -381 2 974 201 39 0 0 chr13 51105579 51105605 -69178707 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 974 1198 56 0 0 chr13 51105608 51105750 -69178562 - B1_Mus2 SINE Alu -5 142 1 2 974 1275 252 113 55 chr13 51105750 51106104 -69178208 + RMER5 LTR ERV1 154 517 -17 2 974 510 259 44 199 chr13 51106138 51106596 -69177716 + RMER15 LTR ERVL 189 575 0 2 974 353 307 117 0 chr13 51106618 51106755 -69177557 + RMER15-int LTR ERVL 10 162 -4837 2 974 579 29 0 0 chr13 51106852 51106921 -69177391 + (CTTTG)n Simple_repeat Simple_repeat 1 69 0 2 974 396 0 0 0 chr13 51107433 51107477 -69176835 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 974 303 28 0 0 chr13 51107477 51107512 -69176800 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 974 256 314 115 11 chr13 51107640 51107727 -69176585 + MLT2C2 LTR ERVL 1 96 -318 2 974 407 269 77 63 chr13 51107805 51107948 -69176364 + MLT2C2 LTR ERVL 79 223 -241 2 974 305 317 68 50 chr13 51107815 51108006 -69176306 + MLT1E LTR MaLR 156 338 -316 2 974 201 171 0 0 chr13 51108063 51108098 -69176214 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 974 1953 165 56 35 chr13 51108099 51108525 -69175787 - RMER10A LTR ERVL 0 442 8 2 974 234 125 0 0 chr13 51108525 51108573 -69175739 + (GA)n Simple_repeat Simple_repeat 1 48 0 2 974 426 20 0 0 chr13 51108619 51108670 -69175642 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 974 436 328 23 8 chr13 51108844 51108976 -69175336 + B4A SINE B4 157 290 -2 2 974 219 139 0 0 chr13 51109048 51109084 -69175228 + (GGAGA)n Simple_repeat Simple_repeat 5 40 0 2 974 697 37 27 18 chr13 51109084 51109195 -69175117 + (GGGAGA)n Simple_repeat Simple_repeat 2 113 0 2 974 864 0 0 0 chr13 51109199 51109295 -69175017 + (GAGAA)n Simple_repeat Simple_repeat 5 100 0 2 974 501 162 8 118 chr13 51109455 51109574 -69174738 + HY1 scRNA scRNA 2 107 -5 2 974 1193 155 70 37 chr13 51109606 51109847 -69174465 + RLTR23 LTR ERV1 179 427 -3 2 974 850 287 84 26 chr13 51109951 51110251 -69174061 + MER21B LTR ERV1 28 349 -514 2 974 1015 110 0 0 chr13 51110251 51110387 -69173925 + B1_Mus1 SINE Alu 1 136 -12 2 974 303 28 0 0 chr13 51110389 51110425 -69173887 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 2 974 850 287 84 26 chr13 51110425 51110468 -69173844 + MER21B LTR ERV1 350 394 -469 2 974 216 0 0 0 chr13 51110468 51110492 -69173820 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 2 974 422 102 0 68 chr13 51110899 51110973 -69173339 - ORR1A2 LTR MaLR 0 394 326 2 974 303 49 0 0 chr13 51110974 51111015 -69173297 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 974 449 53 0 5 chr13 51111030 51111095 -69173217 - B2_Mm2 SINE B2 -107 109 47 2 974 1311 68 28 0 chr13 51111108 51111284 -69173028 - B2_Mm2 SINE B2 -14 181 1 2 974 2180 77 3 0 chr13 51111284 51111568 -69172744 - ORR1A2 LTR MaLR -42 285 1 2 974 558 43 0 0 chr13 51111606 51111675 -69172637 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 974 1018 237 10 103 chr13 51111825 51112111 -69172201 + MTE2a LTR MaLR 54 312 -67 2 974 1324 35 98 6 chr13 51112111 51112285 -69172027 + B2_Mm2 SINE B2 1 190 -5 2 974 1018 266 100 742 chr13 51112285 51112366 -69171946 + MTE2a LTR MaLR 304 366 -8 2 974 641 232 81 20 chr13 51112804 51113002 -69171310 - ID_B1 SINE B4 -13 211 2 2 974 460 319 31 26 chr13 51114129 51114322 -69169990 + B3A SINE B2 1 194 -4 2 974 231 311 167 32 chr13 51114506 51114662 -69169650 + Charlie4a DNA MER1_type 62 238 -270 2 974 367 304 39 45 chr13 51114717 51114872 -69169440 + B4A SINE B4 2 155 -137 2 974 192 40 0 0 chr13 51115122 51115147 -69169165 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 974 711 294 24 34 chr13 51115150 51115358 -69168954 - B4 SINE B4 -6 286 81 2 974 885 205 17 181 chr13 51115352 51115584 -69168728 - B3 SINE B2 -1 194 1 2 974 365 203 14 0 chr13 51115596 51115665 -69168647 - B4 SINE B4 -222 70 1 2 974 346 269 9 71 chr13 51115681 51115793 -69168519 - Tigger5 DNA MER2_type 0 2406 2302 2 974 1452 65 21 0 chr13 51115847 51116033 -69168279 - B2_Mm2 SINE B2 -4 191 2 2 974 308 198 60 36 chr13 51116059 51116143 -69168169 - Tigger5 DNA MER2_type -2150 256 171 2 974 365 0 22 0 chr13 51116157 51116202 -69168110 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 974 993 65 18 18 chr13 51116202 51116372 -69167940 + (GA)n Simple_repeat Simple_repeat 1 171 0 2 974 263 283 0 0 chr13 51116374 51116434 -69167878 + ID_B1 SINE B4 165 224 0 2 974 380 314 107 42 chr13 51116512 51116576 -69167736 + L1MD LINE L1 5254 5324 -1035 2 974 1231 48 0 0 chr13 51116576 51116723 -69167589 + B1_Mus1 SINE Alu 2 148 0 2 974 380 314 107 42 chr13 51116723 51117043 -69167269 + L1MD LINE L1 5325 5663 -696 2 974 203 229 0 0 chr13 51117043 51117078 -69167234 + polypurine Low_complexity Low_complexity 1 35 0 2 975 242 171 0 14 chr13 51119174 51119245 -69165067 + GA-rich Low_complexity Low_complexity 1 70 0 2 975 232 296 0 58 chr13 51119245 51119331 -69164981 - RSINE1 SINE B4 -2 163 83 2 975 354 271 85 3 chr13 51119570 51119769 -69164543 - L1MC1 LINE L1 0 6344 6122 2 975 696 237 41 21 chr13 51119779 51119973 -69164339 - RMER15 LTR ERVL -17 558 361 2 975 299 319 22 0 chr13 51120775 51120866 -69163446 - MER45A DNA Tip100 -26 152 60 2 975 364 194 40 53 chr13 51121093 51121169 -69163143 + B3A SINE B2 3 77 -121 2 975 288 179 0 37 chr13 51122353 51122434 -69161878 + CT-rich Low_complexity Low_complexity 1 78 0 2 975 931 151 0 0 chr13 51122881 51123020 -69161292 - B1_Mur4 SINE Alu -11 139 1 2 975 1294 77 0 6 chr13 51123052 51123221 -69161091 + B2_Mm2 SINE B2 1 168 -27 2 975 216 0 0 0 chr13 51123223 51123247 -69161065 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 2 975 1254 57 13 6 chr13 51123248 51123407 -69160905 - B2_Mm2 SINE B2 -35 160 1 2 975 801 192 65 6 chr13 51123449 51123617 -69160695 - B3A SINE B2 -18 180 3 2 975 492 18 0 0 chr13 51123757 51123814 -69160498 + (TTTC)n Simple_repeat Simple_repeat 4 60 0 2 975 930 177 115 10 chr13 51124374 51124574 -69159738 - ID_B1 SINE B4 -3 221 1 2 975 2985 32 3 0 chr13 51125109 51125454 -69158858 - ORR1A0 LTR MaLR 0 346 1 2 975 2373 136 8 8 chr13 51125598 51125975 -69158337 - ORR1C1 LTR MaLR -1 377 1 2 975 728 253 12 53 chr13 51126048 51126219 -69158093 + B4 SINE B4 6 169 -123 2 975 303 28 0 0 chr13 51126233 51126269 -69158043 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 975 988 309 80 0 chr13 51126500 51126836 -69157476 - MER34A1 LTR ERV1 -2 585 223 2 975 256 222 91 12 chr13 51126914 51127023 -69157289 - MER34A1 LTR ERV1 -467 120 1 2 975 1129 102 0 0 chr13 51127214 51127361 -69156951 + B1_Mus1 SINE Alu 1 147 -1 2 975 1223 168 11 0 chr13 51127408 51127599 -69156713 - RLTR41 LTR ERV1 -116 330 138 2 975 227 54 27 0 chr13 51127626 51127663 -69156649 + (CCCCCA)n Simple_repeat Simple_repeat 4 41 0 2 975 3185 73 77 0 chr13 51127670 51128111 -69156201 + IAPLTR2_Mm LTR ERVK 1 475 0 2 975 1179 72 25 100 chr13 51128112 51128312 -69156000 + IAPEz-int LTR ERVK 9 193 -6288 2 975 234 327 0 0 chr13 51128312 51128367 -69155945 + RLTR27 LTR ERVK 221 275 -34 2 975 3684 56 1 16 chr13 51128367 51128945 -69155367 + IAPEz-int LTR ERVK 168 662 -5819 2 975 943 67 0 0 chr13 51128945 51129064 -69155248 + IAPEz-int LTR ERVK 1359 1477 -5004 2 975 1882 93 0 0 chr13 51129065 51129311 -69155001 + IAPEz-int LTR ERVK 2252 2497 -5183 2 975 14493 54 9 3 chr13 51129338 51131099 -69153213 + IAPEz-int LTR ERVK 4708 6479 -2 2 975 3160 75 77 0 chr13 51131101 51131542 -69152770 + IAPLTR2_Mm LTR ERVK 1 475 0 2 975 266 155 90 28 chr13 51131558 51131641 -69152671 - RLTR41 LTR ERV1 -319 127 1 2 975 813 243 116 45 chr13 51131775 51132042 -69152270 - B4 SINE B4 -5 287 2 2 975 304 259 24 12 chr13 51132559 51132641 -69151671 + MER34A LTR ERV1 473 555 -16 2 975 707 235 44 88 chr13 51133031 51133236 -69151076 - B3A SINE B2 0 198 3 2 975 280 259 23 138 chr13 51134065 51134104 -69150208 + MT2B LTR ERVL 122 151 -433 2 975 701 204 0 22 chr13 51134104 51134239 -69150073 + B1_Mus1 SINE Alu 3 134 -14 2 975 402 21 0 0 chr13 51134244 51134291 -69150021 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 975 202 194 16 16 chr13 51134291 51134354 -69149958 + GA-rich Low_complexity Low_complexity 1 63 0 2 975 1153 261 17 17 chr13 51134762 51135054 -69149258 - B4 SINE B4 0 292 1 2 975 218 211 0 0 chr13 51135103 51135141 -69149171 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 975 205 240 13 13 chr13 51135853 51135929 -69148383 + (TG)n Simple_repeat Simple_repeat 2 77 0 2 975 220 265 37 29 chr13 51135932 51136068 -69148244 + (TATATG)n Simple_repeat Simple_repeat 3 139 0 2 975 198 215 25 12 chr13 51136069 51136149 -69148163 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 975 338 205 22 43 chr13 51136200 51136384 -69147928 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 975 2398 137 5 13 chr13 51136483 51136859 -69147453 - RLTR14 LTR ERV1 0 382 10 2 975 218 333 60 0 chr13 51137894 51137978 -69146334 - B1F2 SINE Alu -60 89 1 2 975 570 273 16 0 chr13 51138030 51138158 -69146154 - B1F1 SINE Alu -18 131 2 2 975 301 363 28 62 chr13 51138158 51138188 -69146124 - B4 SINE B4 -202 90 66 2 975 1682 244 129 40 chr13 51138446 51139012 -69145300 + RLTR1 LTR ERV1 1 616 -8 2 975 1104 129 20 30 chr13 51139133 51139332 -69144980 + MMERGLN-int LTR ERV1 198 394 -7162 2 975 371 245 10 20 chr13 51139336 51139436 -69144876 + RLTR1 LTR ERV1 526 624 0 2 975 500 196 0 199 chr13 51139463 51139548 -69144764 + ID_B1 SINE B4 103 171 -53 2 975 1216 61 0 0 chr13 51139548 51139695 -69144617 + B1_Mus1 SINE Alu 2 148 0 2 975 500 196 0 199 chr13 51139695 51139755 -69144557 + ID_B1 SINE B4 172 219 -5 2 975 327 333 0 19 chr13 51140927 51141034 -69143278 - MLT1A1 LTR MaLR 0 408 304 2 975 637 214 237 23 chr13 51141588 51141765 -69142547 - ID_B1 SINE B4 0 224 10 2 975 3511 169 66 10 chr13 51141765 51142386 -69141926 + Lx5 LINE L1 6392 7047 -3 2 975 1479 182 236 33 chr13 51142389 51142614 -69141698 + RMER4B LTR ERVK 31 284 -301 2 975 1270 97 21 21 chr13 51142614 51142804 -69141508 - B2_Mm1a SINE B2 -2 191 2 3 975 1479 182 236 33 chr13 51142804 51143027 -69141285 + RMER4B LTR ERVK 285 569 -16 2 975 257 132 0 0 chr13 51143024 51143062 -69141250 - MTB_Mm LTR MaLR -369 38 1 3 975 563 148 171 17 chr13 51143539 51143656 -69140656 + B1_Mus1 SINE Alu 1 135 -13 3 975 417 230 0 0 chr13 51143780 51143880 -69140432 + CT-rich Low_complexity Low_complexity 3 102 0 3 975 1192 68 0 0 chr13 51143882 51144028 -69140284 - B1_Mus2 SINE Alu 0 147 2 3 975 770 274 131 70 chr13 51144028 51144260 -69140052 - RLTR18 LTR ERVK -119 497 232 3 975 1158 36 15 0 chr13 51144260 51144397 -69139915 + B1_Mm SINE Alu 1 139 -8 3 975 246 32 0 0 chr13 51144397 51144428 -69139884 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 975 770 274 131 70 chr13 51144428 51144637 -69139675 - RLTR18 LTR ERVK -385 231 29 3 975 194 91 0 29 chr13 51144984 51145018 -69139294 + (TC)n Simple_repeat Simple_repeat 1 33 0 3 975 522 168 83 9 chr13 51145028 51145152 -69139160 - B3A SINE B2 -66 129 1 3 975 335 343 20 0 chr13 51145666 51145768 -69138544 - PB1D10 SINE Alu -5 112 9 3 975 257 192 38 88 chr13 51145810 51145890 -69138422 - PB1D7 SINE Alu -2 118 43 3 975 389 54 18 0 chr13 51146836 51146892 -69137420 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 3 975 270 298 23 31 chr13 51147095 51147223 -69137089 + RLTR15 LTR ERVK 195 321 -38 3 975 185 238 10 29 chr13 51147285 51147389 -69136923 + GA-rich Low_complexity Low_complexity 3 104 0 3 975 1453 138 232 3 chr13 51147397 51147620 -69136692 + RMER17C LTR ERVK 6 301 -109 3 975 2175 133 134 5 chr13 51147620 51148014 -69136298 - BGLII_A LTR ERVK 0 445 1 3 975 1453 138 232 3 chr13 51148014 51148118 -69136194 + RMER17C LTR ERVK 302 407 -3 3 975 419 283 131 40 chr13 51148424 51148623 -69135689 + MER34A1 LTR ERV1 2 218 -369 3 975 432 210 76 95 chr13 51148644 51148802 -69135510 + RLTR42-int LTR ERVK 1172 1326 -4196 3 975 225 132 0 0 chr13 51149135 51149173 -69135139 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 3 975 436 366 53 29 chr13 51149450 51149553 -69134759 - Tigger5 DNA MER2_type -2193 213 106 3 975 2590 172 97 64 chr13 51149553 51150149 -69134163 - RLTR18 LTR ERVK 0 616 1 3 975 436 366 53 29 chr13 51150149 51150253 -69134059 - Tigger5 DNA MER2_type -2301 105 1 3 975 312 188 0 45 chr13 51150263 51150330 -69133982 - MLT2B2 LTR ERVL 0 562 499 3 975 1279 124 5 0 chr13 51150426 51150612 -69133700 - ORR1C1 LTR MaLR 0 378 192 3 975 4549 10 0 0 chr13 51150612 51151105 -69133207 - MT2_Mm LTR ERVL 0 493 1 3 975 49253 15 1 0 chr13 51151105 51156526 -69127786 - MERVL-int LTR ERVL 0 5485 1 3 975 4042 22 0 113 chr13 51156526 51157082 -69127230 - MT2_Mm LTR ERVL 0 493 1 3 975 872 157 161 12 chr13 51157082 51157243 -69127069 - ORR1C1 LTR MaLR -182 185 1 3 975 291 325 0 0 chr13 51157247 51157330 -69126982 - ID4_ SINE ID 0 83 1 3 975 766 234 10 69 chr13 51157351 51157553 -69126759 + B3A SINE B2 5 194 -4 3 975 678 168 134 70 chr13 51157593 51157779 -69126533 + B3A SINE B2 1 198 0 3 975 1194 55 0 14 chr13 51157804 51157952 -69126360 + B1_Mus2 SINE Alu 2 147 0 3 975 575 303 118 123 chr13 51158165 51158646 -69125666 - RMER5 LTR ERV1 -16 518 40 3 975 2645 138 29 112 chr13 51158829 51159044 -69125268 + RLTR28 LTR ERVL 1 207 -317 3 975 968 87 65 0 chr13 51159044 51159182 -69125130 + B1_Mus1 SINE Alu 2 148 0 3 975 2645 138 29 112 chr13 51159182 51159522 -69124790 + RLTR28 LTR ERVL 208 510 -14 3 975 301 207 207 0 chr13 51159807 51159889 -69124423 - ID_B1 SINE B4 -100 124 26 3 975 306 250 56 0 chr13 51159837 51159909 -69124403 - ID4 SINE ID -3 80 5 3 975 1319 87 22 0 chr13 51160343 51160527 -69123785 + B2_Mm2 SINE B2 1 188 -7 3 975 636 263 168 19 chr13 51160527 51160736 -69123576 + B4A SINE B4 8 247 -45 3 975 6436 14 0 0 chr13 51160768 51161468 -69122844 - MERVL-int LTR ERVL -2386 3099 2400 3 975 228 182 0 0 chr13 51161468 51161512 -69122800 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 975 282 339 9 0 chr13 51161550 51161662 -69122650 + (CA)n Simple_repeat Simple_repeat 2 114 0 3 975 321 284 120 95 chr13 51161823 51162107 -69122205 + B4 SINE B4 2 292 0 3 975 306 0 0 0 chr13 51162111 51162145 -69122167 + (T)n Simple_repeat Simple_repeat 1 34 0 3 975 1141 42 21 7 chr13 51162145 51162290 -69122022 - B1_Mm SINE Alu 0 147 1 3 975 46 33 0 0 chr13 51162460 51162520 -69121792 + AT_rich Low_complexity Low_complexity 1 60 0 3 975 210 150 0 0 chr13 51162561 51162601 -69121711 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 975 430 264 45 0 chr13 51163308 51163432 -69120880 - B1F SINE Alu -18 131 3 3 975 358 252 44 139 chr13 51163463 51163551 -69120761 + RSINE1 SINE B4 3 97 -68 3 975 985 73 88 7 chr13 51163551 51163688 -69120624 + B1_Mus1 SINE Alu 1 148 0 3 975 358 252 44 139 chr13 51163688 51163779 -69120533 + RSINE1 SINE B4 98 165 0 3 975 369 98 52 26 chr13 51163780 51163895 -69120417 + (CA)n Simple_repeat Simple_repeat 2 119 0 3 975 576 144 62 71 chr13 51164139 51164169 -69120143 + B2_Mm2 SINE B2 2 31 -164 3 975 3904 48 77 0 chr13 51164169 51164651 -69119661 - MURVY-LTR LTR ERV1 0 519 1 3 975 576 144 62 71 chr13 51164651 51164732 -69119580 + B2_Mm2 SINE B2 32 112 -83 3 975 378 236 63 0 chr13 51164828 51164938 -69119374 + MER34A1 LTR ERV1 1 126 -461 3 975 682 272 109 9 chr13 51165183 51165413 -69118899 + MER34A1 LTR ERV1 332 584 -3 3 975 186 43 0 0 chr13 51165478 51165501 -69118811 + (TATATG)n Simple_repeat Simple_repeat 2 24 0 3 975 342 0 0 0 chr13 51165509 51165547 -69118765 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 975 374 231 13 13 chr13 51165583 51165662 -69118650 + ID4 SINE ID 5 83 0 3 975 516 279 0 15 chr13 51165731 51165862 -69118450 + ID_B1 SINE B4 93 221 -3 3 975 874 192 14 0 chr13 51165997 51166143 -69118169 - B1_Mur2 SINE Alu -1 148 1 3 975 205 149 43 0 chr13 51166320 51166367 -69117945 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 3 975 396 0 0 0 chr13 51166383 51166427 -69117885 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 975 472 238 9 0 chr13 51166427 51166532 -69117780 - B3A SINE B2 -44 154 49 3 975 844 290 60 5 chr13 51166691 51166909 -69117403 + ORR1E LTR MaLR 1 230 -129 3 975 311 0 26 0 chr13 51166959 51166998 -69117314 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 975 264 291 0 48 chr13 51167144 51167227 -69117085 + ID4_ SINE ID 4 82 -1 3 975 186 312 131 61 chr13 51167233 51167431 -69116881 - L3 LINE CR1 -2320 2169 1958 3 975 248 186 17 0 chr13 51167685 51167744 -69116568 + (TA)n Simple_repeat Simple_repeat 2 61 0 3 975 234 105 0 0 chr13 51167745 51167783 -69116529 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 3 975 200 204 0 0 chr13 51167811 51167855 -69116457 + T-rich Low_complexity Low_complexity 2 45 0 3 975 792 253 119 0 chr13 51168150 51168344 -69115968 + ID_B1 SINE B4 1 217 -7 3 975 333 118 0 0 chr13 51168851 51168902 -69115410 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 975 207 100 0 0 chr13 51169314 51169344 -69114968 + (GGGAGA)n Simple_repeat Simple_repeat 2 31 0 3 975 286 289 24 12 chr13 51169360 51169444 -69114868 - PB1D7 SINE Alu -16 104 20 3 975 472 291 38 27 chr13 51169570 51169754 -69114558 - B4A SINE B4 -106 186 1 3 975 558 253 20 0 chr13 51169771 51169921 -69114391 - MER31B LTR ERV1 -74 392 240 3 975 249 298 0 17 chr13 51170259 51170317 -69113995 - ID4 SINE ID 0 83 27 3 975 244 258 0 96 chr13 51170317 51170330 -69113982 - ID SINE ID -139 83 20 3 975 25 0 0 0 chr13 51170334 51170359 -69113953 + AT_rich Low_complexity Low_complexity 1 25 0 3 975 586 259 0 42 chr13 51170440 51170605 -69113707 - RSINE1 SINE B4 -6 159 2 3 975 26 50 0 0 chr13 51170621 51170661 -69113651 + AT_rich Low_complexity Low_complexity 1 40 0 3 975 739 275 18 0 chr13 51170797 51170968 -69113344 - B3 SINE B2 -35 181 8 3 975 405 0 0 0 chr13 51171012 51171057 -69113255 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 975 386 271 0 40 chr13 51171077 51171177 -69113135 - RSINE1 SINE B4 -68 97 2 3 975 1201 55 7 0 chr13 51171191 51171336 -69112976 - B1_Mus1 SINE Alu -1 147 2 3 975 3456 156 22 42 chr13 51171460 51172101 -69112211 + RLTR5_Mm LTR ERV1 1 628 0 3 975 255 271 11 45 chr13 51172147 51172235 -69112077 + MLT1A1 LTR MaLR 318 402 -6 3 975 425 274 103 7 chr13 51172235 51172255 -69112057 + B1F1 SINE Alu 1 149 0 3 975 588 235 0 9 chr13 51172255 51172371 -69111941 + ID_B1 SINE B4 110 224 0 3 975 1038 85 43 0 chr13 51172560 51172701 -69111611 + B1_Mus1 SINE Alu 1 147 -1 3 975 324 19 57 0 chr13 51172702 51172755 -69111557 + (CAAAAA)n Simple_repeat Simple_repeat 5 60 0 3 975 216 397 48 0 chr13 51172784 51172930 -69111382 + MIR SINE MIR 34 186 -76 3 975 339 281 24 110 chr13 51172933 51173097 -69111215 + RSINE1 SINE B4 3 152 -13 3 975 5112 126 64 21 chr13 51173735 51174600 -69109712 - RLTR13D6 LTR ERVK 0 902 1 3 975 223 244 0 0 chr13 51174909 51174954 -69109358 - B1F SINE Alu -103 46 2 3 975 978 233 14 28 chr13 51175014 51175230 -69109082 - B3 SINE B2 -3 213 1 3 975 2030 95 144 174 chr13 51175200 51175479 -69108833 + RLTR47_MM LTR ERV1 1 239 -293 3 975 1367 87 0 16 chr13 51175479 51175667 -69108645 - B2_Mm2 SINE B2 -6 189 5 3 975 216 0 0 0 chr13 51175667 51175691 -69108621 + (C)n Simple_repeat Simple_repeat 1 24 0 3 975 2030 95 144 174 chr13 51175691 51175945 -69108367 + RLTR47_MM LTR ERV1 240 518 -14 3 975 1884 161 50 63 chr13 51176107 51176490 -69107822 - ORR1C1 LTR MaLR 0 378 1 3 975 1164 236 153 19 chr13 51176615 51176935 -69107377 - MTEa LTR MaLR -5 374 12 3 975 342 0 0 0 chr13 51177028 51177066 -69107246 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 975 495 229 18 9 chr13 51177116 51177226 -69107086 + PB1D10 SINE Alu 1 111 -6 3 975 268 287 22 16 chr13 51177227 51177341 -69106971 + GA-rich Low_complexity Low_complexity 1 114 0 3 975 234 0 0 0 chr13 51177429 51177455 -69106857 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 975 836 269 88 18 chr13 51177465 51177738 -69106574 - B4A SINE B4 0 292 1 4 975 296 141 0 25 chr13 51177761 51177841 -69106471 + GA-rich Low_complexity Low_complexity 2 79 0 4 975 473 273 90 15 chr13 51177842 51177976 -69106336 - ID_B1 SINE B4 -13 211 68 4 975 307 264 14 0 chr13 51177956 51178028 -69106284 + MTC-int LTR MaLR 467 539 -719 4 975 1686 264 122 133 chr13 51178048 51178965 -69105347 + RLTR19-int LTR ERVK 2530 3441 -2696 4 975 1195 56 0 0 chr13 51178965 51179107 -69105205 + B1_Mus1 SINE Alu 1 142 -6 4 975 1686 264 122 133 chr13 51179107 51179900 -69104412 + RLTR19-int LTR ERVK 3442 4221 -1916 4 975 189 0 0 0 chr13 51179900 51179921 -69104391 + (T)n Simple_repeat Simple_repeat 1 21 0 4 975 1685 6 0 0 chr13 51179921 51180104 -69104208 - L1Md_A LINE L1 -75 6507 6325 4 975 642 254 11 77 chr13 51180107 51180290 -69104022 + RLTR19-int LTR ERVK 4211 4381 -1756 4 975 2645 190 50 48 chr13 51181093 51181697 -69102615 + RLTR17 LTR ERVK 5 609 -83 4 975 279 133 0 0 chr13 51181955 51182000 -69102312 + (TTTC)n Simple_repeat Simple_repeat 2 46 0 4 975 1214 61 0 0 chr13 51182002 51182149 -69102163 - B1_Mus1 SINE Alu 0 148 2 4 975 2602 106 128 13 chr13 51182164 51182525 -69101787 - RLTR47_MM LTR ERV1 0 532 128 4 975 261 0 0 0 chr13 51182525 51182554 -69101758 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 975 2602 106 128 13 chr13 51182554 51182669 -69101643 - RLTR47_MM LTR ERV1 -405 127 1 4 975 771 282 91 64 chr13 51183043 51183308 -69101004 + B4 SINE B4 11 282 -10 4 975 352 237 0 58 chr13 51183323 51183426 -69100886 - RMER10A LTR ERVL -28 414 318 4 975 215 266 23 38 chr13 51183485 51183618 -69100694 + GA-rich Low_complexity Low_complexity 1 131 0 4 975 1442 207 42 144 chr13 51183621 51184122 -69100190 - RMER4A LTR ERVK 0 466 17 4 975 444 82 0 0 chr13 51184316 51184377 -69099935 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 975 376 247 127 51 chr13 51184857 51185015 -69099297 - RLTR42-int LTR ERVK -4122 1400 1231 4 975 866 153 34 14 chr13 51185019 51185165 -69099147 + B1_Mur4 SINE Alu 1 149 -1 4 975 1238 108 38 0 chr13 51186503 51186689 -69097623 - B2_Mm1t SINE B2 0 193 1 4 975 256 359 99 24 chr13 51186947 51187158 -69097154 - LTR73 LTR ERV1 -302 270 44 4 975 779 272 197 4 chr13 51187161 51187430 -69096882 + MTE2b LTR MaLR 47 367 -12 4 975 898 99 141 7 chr13 51187452 51187594 -69096718 - ORR1B1 LTR MaLR 0 394 234 4 975 4123 76 4 2 chr13 51187599 51188142 -69096170 + RMER2 LTR ERV1 24 567 0 4 975 851 217 15 72 chr13 51188143 51188377 -69095935 - ORR1B1 LTR MaLR -186 208 1 4 975 508 285 36 72 chr13 51188697 51188920 -69095392 + RLTR23 LTR ERV1 158 372 -58 4 975 3329 157 73 44 chr13 51189329 51190029 -69094283 - RMER6D LTR ERVK 0 720 1 4 975 655 271 53 10 chr13 51190244 51190453 -69093859 + ID_B1 SINE B4 1 218 -6 4 975 1062 36 65 0 chr13 51190933 51191071 -69093241 + B2_Mm2 SINE B2 2 148 -47 4 975 237 314 19 29 chr13 51191115 51191220 -69093092 - MER57C2 LTR ERV1 -123 311 208 4 975 200 256 0 0 chr13 51191616 51191659 -69092653 + G-rich Low_complexity Low_complexity 1 43 0 4 975 1213 85 101 11 chr13 51191866 51192045 -69092267 - B2_Mm2 SINE B2 0 195 1 4 975 234 0 0 0 chr13 51192144 51192170 -69092142 + (A)n Simple_repeat Simple_repeat 1 26 0 4 975 2483 59 12 33 chr13 51192449 51192783 -69091529 + IAPLTR2b LTR ERVK 1 327 0 4 975 2211 132 24 111 chr13 51192854 51193103 -69091209 - MTC LTR MaLR 0 421 213 4 975 1189 68 0 0 chr13 51193103 51193250 -69091062 - B1_Mm SINE Alu 0 147 1 4 975 2211 132 24 111 chr13 51193250 51193461 -69090851 - MTC LTR MaLR -209 212 1 4 975 457 217 34 17 chr13 51193743 51193860 -69090452 - PB1D9 SINE Alu 0 120 2 4 975 494 281 15 38 chr13 51193876 51194009 -69090303 + ID_B1 SINE B4 94 223 -1 4 975 258 268 0 109 chr13 51194239 51194331 -69089981 + PB1D10 SINE Alu 34 115 -2 4 975 872 285 106 70 chr13 51194389 51194891 -69089421 + MT2B LTR ERVL 1 588 -13 4 975 21 36 0 0 chr13 51196110 51196138 -69088174 + GC_rich Low_complexity Low_complexity 1 28 0 4 975 277 171 43 51 chr13 51196152 51196269 -69088043 + (CGCGG)n Simple_repeat Simple_repeat 1 116 0 4 975 35 78 0 0 chr13 51196468 51196545 -69087767 + GC_rich Low_complexity Low_complexity 1 77 0 4 975 23 33 0 0 chr13 51196566 51196596 -69087716 + GC_rich Low_complexity Low_complexity 1 30 0 4 975 26 0 0 0 chr13 51196659 51196685 -69087627 + GC_rich Low_complexity Low_complexity 1 26 0 4 975 183 156 0 0 chr13 51197050 51197082 -69087230 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 975 982 151 84 31 chr13 51197716 51197907 -69086405 - B3 SINE B2 -3 213 13 4 975 256 258 73 31 chr13 51199134 51199230 -69085082 + B1F2 SINE Alu 1 100 -49 4 975 670 259 104 0 chr13 51199722 51199880 -69084432 + B3 SINE B2 4 166 -50 4 975 390 129 0 0 chr13 51199880 51199942 -69084370 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 975 670 259 104 0 chr13 51199942 51199976 -69084336 + B3 SINE B2 167 215 -1 4 975 1654 218 170 42 chr13 51200479 51201156 -69083156 + RMER13A LTR ERVK 1 819 -41 4 975 330 229 65 91 chr13 51201261 51201280 -69083032 - MT2B LTR ERVL -297 304 254 4 975 576 150 0 10 chr13 51201280 51201381 -69082931 - B1_Mus1 SINE Alu -26 122 23 4 975 330 229 65 91 chr13 51201381 51201415 -69082897 - MT2B LTR ERVL -297 253 155 4 975 946 138 75 37 chr13 51201728 51201916 -69082396 - B2_Mm2 SINE B2 0 195 1 4 975 325 257 52 87 chr13 51201917 51202032 -69082280 - PB1D7 SINE Alu -6 114 4 4 975 1195 252 66 41 chr13 51202182 51202546 -69081766 + MTE2b LTR MaLR 1 373 -6 4 975 335 306 30 30 chr13 51203222 51203323 -69080989 + RSINE1 SINE B4 8 108 -57 4 975 225 0 0 0 chr13 51203344 51203369 -69080943 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 975 231 293 17 0 chr13 51203499 51203557 -69080755 - PB1D10 SINE Alu -51 66 8 4 975 521 267 144 70 chr13 51203781 51204051 -69080261 - Tigger7 DNA MER2_type -1741 750 461 4 975 746 252 65 3 chr13 51204031 51204229 -69080083 - B3A SINE B2 0 216 10 4 975 884 311 79 51 chr13 51204232 51204588 -69079724 - Tigger7 DNA MER2_type -2012 479 114 4 975 2059 78 206 0 chr13 51205454 51205799 -69078513 - BGLII_Mus LTR ERVK 0 422 7 4 975 537 275 38 15 chr13 51206044 51206177 -69078135 - B1F SINE Alu -1 148 13 4 975 250 275 43 0 chr13 51206993 51207062 -69077250 - PB1D10 SINE Alu -8 109 38 4 975 2210 85 38 35 chr13 51207150 51207193 -69077119 - ORR1A2 LTR MaLR -8 319 285 4 975 1353 85 0 21 chr13 51207193 51207386 -69076926 - B2_Mm2 SINE B2 -6 189 1 4 975 2210 85 38 35 chr13 51207386 51207660 -69076652 - ORR1A2 LTR MaLR -43 284 1 4 975 8534 144 61 69 chr13 51207660 51209629 -69074683 - ORR1A2-int LTR MaLR 0 1792 1 4 975 598 212 62 0 chr13 51210118 51210231 -69074081 - ETnERV2-int LTR ERVK -214 7192 7073 4 975 1165 242 239 20 chr13 51210304 51210797 -69073515 + RCHARR1 DNA MER1_type 37 637 -337 4 975 1546 62 16 0 chr13 51210797 51210989 -69073323 - B2_Mm2 SINE B2 0 195 1 4 975 477 229 114 0 chr13 51210993 51211159 -69073153 + RCHARR1 DNA MER1_type 756 940 -34 4 975 388 297 70 28 chr13 51212528 51212670 -69071642 - RSINE1 SINE B4 -17 148 1 4 975 623 234 175 26 chr13 51212712 51212901 -69071411 + ID_B1 SINE B4 8 224 0 4 975 343 301 8 96 chr13 51213250 51213375 -69070937 - RMER15 LTR ERVL -105 470 357 4 975 383 271 115 43 chr13 51213415 51213554 -69070758 - Lx8 LINE L1 -307 7166 7018 4 975 675 163 89 0 chr13 51213608 51213743 -69070569 + B1_Mus2 SINE Alu 1 147 0 4 975 240 245 214 54 chr13 51214286 51214398 -69069914 - MER21B LTR ERV1 -63 800 671 4 975 232 286 10 81 chr13 51214918 51215017 -69069295 - PB1D7 SINE Alu -22 95 4 4 975 230 271 105 12 chr13 51215094 51215180 -69069132 - B1_Mus2 SINE Alu -50 97 4 4 975 581 224 103 59 chr13 51215812 51216016 -69068296 - B3 SINE B2 -1 215 3 4 975 551 269 214 11 chr13 51216401 51216672 -69067640 - RMER5 LTR ERV1 -96 438 113 4 975 241 311 10 72 chr13 51217075 51217172 -69067140 + MT2B LTR ERVL 146 236 -365 4 975 374 171 23 68 chr13 51217129 51217217 -69067095 + PB1D9 SINE Alu 37 120 0 4 975 548 247 75 12 chr13 51217223 51217383 -69066929 - B3 SINE B2 0 216 47 4 975 633 238 8 0 chr13 51219018 51219140 -69065172 + ID_B1 SINE B4 102 224 0 4 975 520 155 227 25 chr13 51219254 51219373 -69064939 - B1_Mur4 SINE Alu -7 143 1 4 975 234 225 96 55 chr13 51219743 51219863 -69064449 - B1F2 SINE Alu -8 112 1 4 975 261 0 0 0 chr13 51219925 51219954 -69064358 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 975 270 279 93 54 chr13 51220226 51220355 -69063957 - L1MCa LINE L1 -6373 135 2 4 975 328 352 48 0 chr13 51221571 51221696 -69062616 - L1M4 LINE L1 -3670 2476 2346 4 975 314 336 67 0 chr13 51223771 51223875 -69060437 - PB1D10 SINE Alu -5 112 2 4 975 1188 75 0 0 chr13 51224801 51224947 -69059365 + B1_Mus2 SINE Alu 2 147 0 4 975 189 0 0 0 chr13 51225685 51225706 -69058606 + (C)n Simple_repeat Simple_repeat 1 21 0 4 975 611 200 34 48 chr13 51225914 51226061 -69058251 - B1_Mur1 SINE Alu 0 149 5 4 975 516 351 40 63 chr13 51226133 51226355 -69057957 + B4A SINE B4 73 289 -3 4 975 267 306 14 14 chr13 51226520 51226593 -69057719 - MIRc SINE MIR -139 129 57 4 975 183 80 0 0 chr13 51226949 51226974 -69057338 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 4 975 1846 89 129 0 chr13 51227137 51227408 -69056904 - ORR1A2 LTR MaLR -8 319 14 4 975 279 0 0 0 chr13 51227618 51227649 -69056663 + (T)n Simple_repeat Simple_repeat 1 31 0 4 975 425 265 84 45 chr13 51227795 51227975 -69056337 - L1M3 LINE L1 -1458 4685 4498 4 975 2734 62 87 0 chr13 51227975 51228343 -69055969 + MTB LTR MaLR 1 400 0 4 975 7034 94 31 70 chr13 51228343 51229485 -69054827 + MTB-int LTR MaLR 1 1098 0 4 975 2931 50 55 8 chr13 51229485 51229867 -69054445 + MTB LTR MaLR 1 400 0 4 975 409 286 85 46 chr13 51229867 51229966 -69054346 - L1M3 LINE L1 -1644 4499 4395 4 975 564 248 22 29 chr13 51229967 51230104 -69054208 + B3A SINE B2 4 139 -59 4 975 180 0 0 0 chr13 51230113 51230133 -69054179 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 5 975 985 227 58 4 chr13 51230399 51230625 -69053687 - ORR1C2 LTR MaLR -51 333 96 5 975 302 144 124 40 chr13 51230616 51230696 -69053616 + PB1D7 SINE Alu 18 120 0 5 975 365 200 74 53 chr13 51230736 51230831 -69053481 + RSINE1 SINE B4 69 165 0 5 975 505 241 14 28 chr13 51230975 51231116 -69053196 + L1M3 LINE L1 4561 4699 -1441 5 975 245 308 105 67 chr13 51231625 51231998 -69052314 + Tigger2b DNA MER2_type 131 517 -209 5 975 370 320 0 28 chr13 51232005 51232111 -69052201 + RSINE1 SINE B4 2 104 -61 5 975 638 261 111 42 chr13 51232374 51232740 -69051572 - MLT2B2 LTR ERVL -7 555 20 5 975 225 0 0 0 chr13 51233025 51233050 -69051262 + (T)n Simple_repeat Simple_repeat 1 25 0 5 975 429 20 0 0 chr13 51233268 51233318 -69050994 + (TCCC)n Simple_repeat Simple_repeat 1 50 0 5 975 180 152 0 0 chr13 51233632 51233665 -69050647 + C-rich Low_complexity Low_complexity 1 33 0 5 975 456 273 151 31 chr13 51233685 51233844 -69050468 + B4 SINE B4 1 178 -114 5 975 309 51 0 0 chr13 51233879 51233918 -69050394 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 975 339 259 12 47 chr13 51233924 51234009 -69050303 + B4A SINE B4 203 284 -8 5 975 537 58 0 0 chr13 51234281 51234350 -69049962 + (TTTC)n Simple_repeat Simple_repeat 3 71 0 5 975 529 311 71 0 chr13 51234359 51234542 -69049770 - B3 SINE B2 -19 197 2 5 975 265 250 67 0 chr13 51234546 51234606 -69049706 - PB1D10 SINE Alu -7 110 47 5 975 227 318 26 148 chr13 51235635 51235686 -69048626 - MT2B2 LTR ERVL -234 350 203 5 975 373 226 19 154 chr13 51235686 51235848 -69048464 - B1F1 SINE Alu -7 142 3 5 975 227 318 26 148 chr13 51235848 51235864 -69048448 - MT2B2 LTR ERVL -234 202 150 5 975 475 286 176 59 chr13 51236776 51237234 -69047078 - L1MB2 LINE L1 -276 6036 5519 5 975 293 164 116 71 chr13 51237301 51237413 -69046899 - L1MB2 LINE L1 -797 5381 5265 5 975 293 268 128 44 chr13 51237432 51237548 -69046764 + Charlie1a DNA MER1_type 897 1091 -364 5 975 399 26 94 7 chr13 51237548 51237612 -69046700 - B2_Mm1a SINE B2 -6 187 124 5 975 228 280 115 50 chr13 51237586 51237668 -69046644 + Charlie1a DNA MER1_type 940 1031 -424 5 975 1019 71 200 0 chr13 51237668 51237823 -69046489 - B2_Mm1a SINE B2 -6 187 2 5 975 228 280 115 50 chr13 51237823 51237879 -69046433 + Charlie1a DNA MER1_type 1032 1087 -368 5 975 382 331 42 48 chr13 51237921 51238086 -69046226 + B3A SINE B2 9 172 -26 5 975 832 65 195 0 chr13 51238130 51238253 -69046059 + B1_Mus1 SINE Alu 1 147 -1 5 975 613 13 13 0 chr13 51238307 51238386 -69045926 - L1_Mus2 LINE L1 0 6566 6487 5 975 263 268 0 53 chr13 51240218 51240293 -69044019 + ID4 SINE ID 10 80 -3 5 975 473 232 85 26 chr13 51240382 51240511 -69043801 - B1F SINE Alu -1 148 14 5 975 422 275 34 74 chr13 51240511 51240531 -69043781 - ID_B1 SINE B4 -2 222 80 5 975 946 39 0 118 chr13 51240544 51240688 -69043624 - B1_Mus1 SINE Alu 0 148 22 5 975 237 57 86 0 chr13 51240792 51240827 -69043485 - L1MB7 LINE L1 -57 6127 6090 5 975 268 324 0 0 chr13 51240913 51240984 -69043328 - ID_B1 SINE B4 -29 195 125 5 975 238 320 16 39 chr13 51241146 51241328 -69042984 - L1M4 LINE L1 -399 5779 5602 5 975 414 236 352 9 chr13 51241354 51241597 -69042715 - L1M4 LINE L1 -645 5517 5192 5 975 307 314 46 46 chr13 51241616 51241746 -69042566 - B1F SINE Alu -15 134 5 5 975 277 331 21 56 chr13 51241628 51241772 -69042540 - ID_B1 SINE B4 -24 200 62 5 975 953 282 130 48 chr13 51241810 51242525 -69041787 - L1M4 LINE L1 -1020 5126 4353 5 975 371 191 180 0 chr13 51242557 51242646 -69041666 - PB1 SINE Alu 0 127 23 5 975 204 40 0 0 chr13 51246770 51246795 -69037517 + (T)n Simple_repeat Simple_repeat 1 25 0 5 975 258 32 0 0 chr13 51247208 51247239 -69037073 + (TTTC)n Simple_repeat Simple_repeat 1 31 0 5 975 26 0 0 0 chr13 51247755 51247781 -69036531 + AT_rich Low_complexity Low_complexity 1 26 0 5 975 207 0 0 0 chr13 51248964 51248987 -69035325 + (T)n Simple_repeat Simple_repeat 1 23 0 5 975 275 271 221 12 chr13 51249040 51249126 -69035186 - PB1D7 SINE Alu -8 112 9 5 976 697 315 36 76 chr13 51249273 51249575 -69034737 - B4A SINE B4 0 292 3 5 976 347 278 186 0 chr13 51249577 51249674 -69034638 - PB1D10 SINE Alu 0 117 3 5 976 1206 43 0 0 chr13 51249706 51249845 -69034467 - B1_Mus1 SINE Alu -6 142 4 5 976 616 297 168 0 chr13 51250473 51250658 -69033654 - ID_B1 SINE B4 -2 222 7 5 976 301 219 62 0 chr13 51251503 51251567 -69032745 - ORR1D2-int LTR MaLR -551 819 752 5 976 1027 201 112 37 chr13 51251567 51251835 -69032477 - ORR1D2-int LTR MaLR -1082 288 1 5 976 821 208 265 56 chr13 51251835 51252141 -69032171 - ORR1D2 LTR MaLR 0 370 1 5 976 294 125 0 0 chr13 51252259 51252307 -69032005 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 5 976 262 312 26 13 chr13 51252309 51252387 -69031925 - B4A SINE B4 -212 80 2 5 976 216 0 0 0 chr13 51252513 51252537 -69031775 + (T)n Simple_repeat Simple_repeat 1 24 0 5 976 359 260 60 0 chr13 51252537 51252637 -69031675 - PB1D10 SINE Alu 0 117 12 5 976 258 152 0 0 chr13 51253016 51253048 -69031264 + T-rich Low_complexity Low_complexity 35 66 0 5 976 1135 68 0 20 chr13 51253048 51253198 -69031114 - B1_Mus2 SINE Alu 0 147 1 5 976 258 152 0 0 chr13 51253198 51253231 -69031081 + T-rich Low_complexity Low_complexity 2 34 0 5 976 1310 58 23 6 chr13 51253282 51253456 -69030856 + B2_Mm2 SINE B2 2 178 -17 5 976 603 285 21 53 chr13 51253477 51253666 -69030646 - B3A SINE B2 -4 194 12 5 976 2447 105 68 57 chr13 51253699 51254124 -69030188 - RLTR23 LTR ERV1 0 430 1 5 976 1287 102 17 0 chr13 51254457 51254633 -69029679 + B2_Mm1t SINE B2 1 179 -14 5 976 588 222 159 11 chr13 51254658 51254840 -69029472 + B3 SINE B2 5 213 -3 5 976 294 241 98 36 chr13 51255030 51255142 -69029170 + L1MD LINE L1 3603 3721 -2425 5 976 340 167 15 0 chr13 51255423 51255489 -69028823 + RSINE1 SINE B4 83 149 -16 5 976 379 182 15 0 chr13 51255883 51255949 -69028363 + PB1D10 SINE Alu 40 106 -11 5 976 237 227 12 118 chr13 51255884 51255969 -69028343 + MT2B2 LTR ERVL 198 273 -311 5 976 379 272 70 76 chr13 51256011 51256182 -69028130 + B3A SINE B2 3 172 -26 5 976 21 0 0 0 chr13 51256330 51256351 -69027961 + AT_rich Low_complexity Low_complexity 1 21 0 5 976 387 306 12 0 chr13 51256986 51257071 -69027241 - ID_B1 SINE B4 -25 199 114 5 976 275 203 24 48 chr13 51257373 51257456 -69026856 + ID4 SINE ID 1 81 -2 5 976 290 222 95 36 chr13 51258016 51258100 -69026212 - MTEa LTR MaLR -7 372 284 5 976 243 257 16 0 chr13 51258114 51258184 -69026128 - MTEa LTR MaLR -214 165 92 5 976 567 309 106 15 chr13 51258430 51258703 -69025609 - Charlie1a DNA MER1_type -758 697 400 5 976 1282 223 38 26 chr13 51259055 51259400 -69024912 - RLTR15 LTR ERVK -10 349 1 5 976 456 231 58 0 chr13 51259592 51259696 -69024616 + RSINE1 SINE B4 19 128 -37 5 976 1335 103 121 25 chr13 51259921 51260160 -69024152 - Lx LINE L1 -1 6653 6392 5 976 252 130 0 0 chr13 51260188 51260234 -69024078 + (TCTG)n Simple_repeat Simple_repeat 1 46 0 5 976 241 180 0 107 chr13 51260235 51260291 -69024021 - B3A SINE B2 -111 87 38 5 976 389 229 12 18 chr13 51260303 51260413 -69023899 - ID4_ SINE ID -41 111 3 5 976 227 258 184 10 chr13 51260501 51260599 -69023713 - PB1D10 SINE Alu -1 116 2 5 976 1006 205 23 45 chr13 51260665 51260885 -69023427 - ID_B1 SINE B4 -8 216 2 5 976 252 86 0 0 chr13 51261098 51261133 -69023179 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 976 516 222 309 26 chr13 51261652 51261847 -69022465 - MER31B LTR ERV1 -205 261 22 5 976 241 295 39 0 chr13 51261854 51261932 -69022380 - ID4_ SINE ID -1 82 2 5 976 794 240 75 0 chr13 51263214 51263414 -69020898 - ID_B1 SINE B4 -9 215 1 5 976 2656 65 59 3 chr13 51263704 51264044 -69020268 - RLTR10D LTR ERVK 0 359 1 5 976 21 36 0 0 chr13 51264057 51264085 -69020227 + AT_rich Low_complexity Low_complexity 1 28 0 5 976 599 239 40 45 chr13 51264189 51264377 -69019935 + B3A SINE B2 15 190 -5 5 976 417 258 39 55 chr13 51264626 51264753 -69019559 - RSINE1 SINE B4 -39 126 2 5 976 362 344 0 15 chr13 51265203 51265336 -69018976 - MER34A LTR ERV1 -440 131 1 5 976 976 197 43 24 chr13 51265386 51265594 -69018718 - B3 SINE B2 0 216 5 5 976 226 326 33 0 chr13 51265603 51265695 -69018617 + MER96B DNA hAT 296 390 -27 5 976 967 265 101 4 chr13 51267796 51268054 -69016258 - B4 SINE B4 -5 287 5 5 976 394 154 0 0 chr13 51268470 51268526 -69015786 - MTEb LTR MaLR -1 378 323 5 976 584 280 55 113 chr13 51268526 51268764 -69015548 + B4A SINE B4 1 224 -68 5 976 275 315 19 11 chr13 51268808 51268898 -69015414 - PB1D10 SINE Alu -26 94 3 5 976 228 254 141 78 chr13 51268898 51268937 -69015375 - MT2B2 LTR ERVL -415 169 123 5 976 1325 97 17 0 chr13 51269152 51269327 -69014985 + B2_Mm2 SINE B2 2 179 -16 5 976 1053 134 0 0 chr13 51269327 51269499 -69014813 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 5 976 444 218 11 11 chr13 51269656 51269744 -69014568 - PB1 SINE Alu -19 108 21 5 976 201 315 14 14 chr13 51270696 51270770 -69013542 + CT-rich Low_complexity Low_complexity 2 75 0 5 976 226 89 21 43 chr13 51270791 51270838 -69013474 + CT-rich Low_complexity Low_complexity 3 48 0 5 976 218 305 34 0 chr13 51270840 51270899 -69013413 - ID4_ SINE ID 0 83 23 5 976 298 303 0 62 chr13 51270959 51271040 -69013272 - B4A SINE B4 0 292 217 5 976 708 230 115 0 chr13 51271046 51271220 -69013092 - B3A SINE B2 -4 194 1 5 976 318 265 0 0 chr13 51271246 51271314 -69012998 - ID4_ SINE ID -14 69 2 5 976 617 258 149 5 chr13 51271339 51271534 -69012778 - B4A SINE B4 -68 224 2 5 976 689 245 39 0 chr13 51271762 51271908 -69012404 + MTEa LTR MaLR 6 157 -222 5 976 1782 163 85 26 chr13 51271908 51272249 -69012063 - ORR1C2 LTR MaLR 0 384 24 6 976 2526 157 19 12 chr13 51272255 51272668 -69011644 + MTC LTR MaLR 6 421 0 6 976 493 319 109 23 chr13 51272734 51272991 -69011321 + B4 SINE B4 5 283 -9 6 976 934 236 62 9 chr13 51273558 51273768 -69010544 + B4 SINE B4 9 229 -63 6 976 360 77 0 0 chr13 51273866 51273918 -69010394 + (CAGG)n Simple_repeat Simple_repeat 4 55 0 6 976 270 0 0 0 chr13 51273922 51273952 -69010360 + (TC)n Simple_repeat Simple_repeat 1 30 0 6 976 252 0 0 0 chr13 51273952 51273979 -69010333 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 976 2340 134 23 160 chr13 51274797 51275165 -69009147 - RMER6B LTR ERVK -2 459 119 6 976 1228 41 0 7 chr13 51275165 51275314 -69008998 + B1_Mus1 SINE Alu 1 148 0 6 976 2340 134 23 160 chr13 51275314 51275477 -69008835 - RMER6B LTR ERVK -343 118 1 6 976 328 206 56 93 chr13 51275478 51275585 -69008727 - RMER15 LTR ERVL -426 149 47 6 976 235 292 101 0 chr13 51275622 51275711 -69008601 - RMER15 LTR ERVL -477 98 1 6 976 818 225 64 0 chr13 51275949 51276122 -69008190 + B4A SINE B4 107 290 -2 6 976 3270 46 13 0 chr13 51276226 51276621 -69007691 + MTB LTR MaLR 1 400 0 6 976 660 226 130 10 chr13 51276699 51276891 -69007421 - B3 SINE B2 -1 215 1 6 976 388 195 36 12 chr13 51277183 51277266 -69007046 + B4 SINE B4 1 85 -207 6 976 326 250 35 44 chr13 51277275 51277388 -69006924 + PB1D9 SINE Alu 1 112 -8 6 976 1385 61 27 22 chr13 51277399 51277584 -69006728 + B2_Mm2 SINE B2 1 186 -9 6 976 363 78 0 0 chr13 51277671 51277722 -69006590 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 976 238 327 100 25 chr13 51277915 51278075 -69006237 - MLT1H LTR MaLR -156 393 222 6 976 1002 274 35 28 chr13 51278341 51278630 -69005682 - B4A SINE B4 0 292 2 6 976 642 310 14 27 chr13 51278645 51278864 -69005448 - ID_B1 SINE B4 -7 217 2 6 976 1114 79 0 0 chr13 51279736 51279875 -69004437 - B1_Mm SINE Alu -8 139 1 6 976 1126 111 0 12 chr13 51279877 51280041 -69004271 - B2_Mm2 SINE B2 -19 176 15 6 976 233 254 16 16 chr13 51280485 51280549 -69003763 - RLTR19C LTR ERVK -409 97 34 6 976 507 256 48 92 chr13 51280591 51280819 -69003493 + RLTR42-int LTR ERVK 1147 1364 -4158 6 976 917 207 100 8 chr13 51281315 51281537 -69002775 - ID_B1 SINE B4 -37 255 8 6 976 2151 87 25 11 chr13 51281588 51281925 -69002387 - ORR1A3 LTR MaLR -8 359 11 6 976 278 67 22 0 chr13 51282066 51282111 -69002201 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 976 666 271 50 0 chr13 51282222 51282403 -69001909 - B3A SINE B2 -8 190 1 6 976 1601 42 0 5 chr13 51282415 51282606 -69001706 - B2_Mm2 SINE B2 -5 190 1 6 976 2600 141 5 24 chr13 51282631 51283046 -69001266 - MTB_Mm LTR MaLR 0 407 1 6 976 1748 16 0 0 chr13 51283327 51283519 -69000793 - B2_Mm1a SINE B2 0 193 2 6 976 340 340 105 49 chr13 51283706 51283953 -69000359 - HAL1 LINE L1 -703 1804 1544 6 976 436 281 22 71 chr13 51284192 51284324 -68999988 + B4 SINE B4 3 129 -163 6 976 189 74 0 0 chr13 51284324 51284351 -68999961 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 6 976 436 281 22 71 chr13 51284351 51284402 -68999910 + B4 SINE B4 130 177 -115 6 976 392 208 25 49 chr13 51284362 51284443 -68999869 - B1F2 SINE Alu -36 113 35 6 976 540 253 47 63 chr13 51285011 51285201 -68999111 + RLTR23 LTR ERV1 244 430 0 6 976 284 219 30 30 chr13 51285262 51285328 -68998984 + (CACG)n Simple_repeat Simple_repeat 2 67 0 6 976 501 84 0 0 chr13 51285934 51286005 -68998307 + (TCC)n Simple_repeat Simple_repeat 3 73 0 6 976 898 124 0 8 chr13 51286012 51286142 -68998170 - B2_Mm2 SINE B2 -66 129 1 6 976 203 229 0 16 chr13 51286814 51286876 -68997436 + CT-rich Low_complexity Low_complexity 2 62 0 6 976 933 248 27 27 chr13 51286914 51287134 -68997178 - ID_B1 SINE B4 -4 220 1 6 976 3824 162 10 2 chr13 51287696 51288296 -68996016 - Lx5 LINE L1 0 7050 6446 6 976 2696 90 6 0 chr13 51288297 51288663 -68995649 + Lx5 LINE L1 5710 6077 -973 6 976 421 208 167 10 chr13 51288791 51288893 -68995419 - PB1D9 SINE Alu -1 119 2 6 976 384 274 32 165 chr13 51288939 51289127 -68995185 - RSINE1 SINE B4 0 165 3 6 976 813 244 67 5 chr13 51289150 51289360 -68994952 - B4A SINE B4 -68 224 2 6 976 752 242 20 35 chr13 51289378 51289579 -68994733 - B3A SINE B2 0 198 1 6 976 214 179 26 0 chr13 51289604 51289643 -68994669 + CT-rich Low_complexity Low_complexity 4 43 0 6 976 217 286 0 100 chr13 51289663 51289733 -68994579 - ID4 SINE ID -3 80 18 6 976 210 301 14 14 chr13 51289931 51290005 -68994307 + BC1_Mm scRNA scRNA 15 88 -64 6 976 810 254 20 10 chr13 51290262 51290457 -68993855 + B3A SINE B2 2 198 0 6 976 497 292 15 44 chr13 51290825 51290961 -68993351 - B3 SINE B2 0 216 85 6 976 542 234 73 0 chr13 51290966 51291103 -68993209 - Lx8 LINE L1 -404 7069 6923 6 976 349 297 35 48 chr13 51291117 51291262 -68993050 - L1MEc LINE L1 -5734 666 524 6 976 387 0 0 0 chr13 51291383 51291426 -68992886 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 6 976 717 290 67 41 chr13 51291609 51291715 -68992597 - B4 SINE B4 0 292 176 6 976 1209 66 107 6 chr13 51291715 51291883 -68992429 - B2_Mm2 SINE B2 -10 185 1 6 976 717 290 67 41 chr13 51291883 51292046 -68992266 - B4 SINE B4 -117 175 16 6 976 214 308 45 15 chr13 51291990 51292056 -68992256 - ID4 SINE ID -13 70 3 6 976 1335 136 15 0 chr13 51292229 51292435 -68991877 + URR1B DNA MER1_type 3 211 -14 6 976 633 203 37 8 chr13 51292583 51292717 -68991595 + B1F SINE Alu 2 139 -10 6 976 1407 265 58 6 chr13 51292717 51293059 -68991253 - MTE2b LTR MaLR -8 371 12 6 976 299 321 104 0 chr13 51294128 51294234 -68990078 + PB1D10 SINE Alu 1 117 0 6 976 1276 106 20 36 chr13 51294376 51294571 -68989741 + B2_Mm2 SINE B2 1 192 -3 6 976 951 232 229 28 chr13 51294573 51294857 -68989455 + ORR1E LTR MaLR 19 359 0 6 976 1209 265 20 119 chr13 51295766 51296211 -68988101 - MTD LTR MaLR -14 405 5 6 976 327 226 111 17 chr13 51296887 51297004 -68987308 - L1M2 LINE L1 -2412 3731 3604 6 976 367 278 103 94 chr13 51297075 51297373 -68986939 - RSINE1 SINE B4 -11 281 9 6 976 786 158 134 4 chr13 51297378 51297569 -68986743 - RLTR20B2 LTR ERVK 0 563 239 6 976 2546 67 70 0 chr13 51297644 51298000 -68986312 + RLTR10A LTR ERVK 31 411 0 6 976 367 207 40 10 chr13 51298458 51298550 -68985762 - B1F SINE Alu -54 95 5 6 976 252 300 0 0 chr13 51298550 51298620 -68985692 - BC1_Mm scRNA scRNA -50 102 33 6 976 471 35 0 0 chr13 51298707 51298764 -68985548 + (TTCC)n Simple_repeat Simple_repeat 4 60 0 6 976 312 27 0 0 chr13 51298764 51298801 -68985511 + (TC)n Simple_repeat Simple_repeat 1 37 0 6 976 1151 71 0 0 chr13 51298801 51298942 -68985370 - B1_Mus2 SINE Alu -6 141 1 6 976 348 311 22 96 chr13 51301485 51301620 -68982692 - B4A SINE B4 -152 140 16 6 976 417 240 65 65 chr13 51301810 51301948 -68982364 - B4A SINE B4 -140 152 15 6 976 7736 52 1 1 chr13 51301948 51302877 -68981435 + L1_Mus1 LINE L1 5639 6567 0 6 976 451 253 27 0 chr13 51303040 51303190 -68981122 - L1M4 LINE L1 -889 5257 5104 6 976 411 271 75 41 chr13 51303443 51303589 -68980723 - MLT1J1 LTR MaLR -240 204 54 6 976 206 267 0 39 chr13 51304047 51304125 -68980187 + GA-rich Low_complexity Low_complexity 5 79 0 6 976 333 299 87 7 chr13 51304292 51304430 -68979882 - B4 SINE B4 -4 288 140 6 976 465 301 228 25 chr13 51304853 51305096 -68979216 + B4 SINE B4 1 292 0 6 976 928 258 73 117 chr13 51305140 51305645 -68978667 + RLTR11A LTR ERVK 1 483 -45 6 976 372 231 13 0 chr13 51305772 51305850 -68978462 - ID4_ SINE ID -3 80 2 6 976 402 132 0 0 chr13 51306252 51306328 -68977984 + (TCTG)n Simple_repeat Simple_repeat 4 79 0 6 976 770 278 77 5 chr13 51306351 51306546 -68977766 - B4A SINE B4 0 292 84 6 976 231 269 14 82 chr13 51306483 51306556 -68977756 + YREP_Mm Unknown Unknown 256 323 -1489 6 976 625 290 30 57 chr13 51306585 51306885 -68977427 - B4A SINE B4 0 292 1 6 976 2701 257 53 9 chr13 51307228 51307912 -68976400 + Lx8 LINE L1 6455 7168 -305 6 976 1015 264 24 69 chr13 51308204 51308435 -68975877 + Lx8 LINE L1 7146 7368 -105 6 976 695 18 26 34 chr13 51308435 51308552 -68975760 + (GGAGA)n Simple_repeat Simple_repeat 1 116 0 6 976 1015 264 24 69 chr13 51308552 51308653 -68975659 + Lx8 LINE L1 7369 7463 -10 6 976 1042 266 21 52 chr13 51308679 51308965 -68975347 + B4A SINE B4 12 288 -4 6 976 315 0 0 0 chr13 51309007 51309042 -68975270 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 976 216 0 0 0 chr13 51309042 51309066 -68975246 + (GA)n Simple_repeat Simple_repeat 1 24 0 6 976 1365 96 11 0 chr13 51309315 51309503 -68974809 + B2_Mm1t SINE B2 1 190 -3 6 976 1069 74 22 0 chr13 51309507 51309642 -68974670 + B1_Mus1 SINE Alu 2 139 -9 6 976 240 59 0 0 chr13 51309642 51309676 -68974636 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 976 180 0 0 0 chr13 51309677 51309697 -68974615 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 976 300 256 11 0 chr13 51309723 51309813 -68974499 + (TG)n Simple_repeat Simple_repeat 2 92 0 6 976 581 245 106 78 chr13 51309824 51310107 -68974205 - B4A SINE B4 -1 291 1 6 976 201 213 0 41 chr13 51310310 51310359 -68973953 + GA-rich Low_complexity Low_complexity 1 47 0 6 976 1112 254 28 21 chr13 51310676 51310961 -68973351 - B4A SINE B4 -4 288 2 7 976 763 148 340 6 chr13 51310994 51311123 -68973189 + B3 SINE B2 1 150 -66 7 976 381 43 0 0 chr13 51311123 51311170 -68973142 + (CATA)n Simple_repeat Simple_repeat 4 50 0 7 976 763 148 340 6 chr13 51311170 51311196 -68973116 + B3 SINE B2 151 207 -9 7 976 718 140 0 0 chr13 51311212 51311319 -68972993 + B2_Mm2 SINE B2 1 107 -88 7 976 1250 48 0 0 chr13 51311817 51311964 -68972348 + B1_Mus1 SINE Alu 2 148 0 7 976 916 263 96 74 chr13 51312314 51312638 -68971674 - MTE2b LTR MaLR -34 345 15 7 976 273 237 79 95 chr13 51312701 51312827 -68971485 + Charlie10 DNA MER1_type 205 328 -2494 7 976 1149 196 115 14 chr13 51312763 51313060 -68971252 + MTD LTR MaLR 81 407 -12 7 976 189 0 0 0 chr13 51313625 51313646 -68970666 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 7 976 423 303 73 8 chr13 51313701 51313824 -68970488 + B4A SINE B4 3 133 -159 7 976 228 343 45 89 chr13 51313824 51313925 -68970387 + B3 SINE B2 3 216 0 7 976 606 63 0 0 chr13 51314798 51314877 -68969435 + (CA)n Simple_repeat Simple_repeat 1 79 0 7 976 307 132 132 0 chr13 51314953 51315006 -68969306 + RMER10A LTR ERVL 321 380 -62 7 976 246 128 0 0 chr13 51315836 51315875 -68968437 + (TG)n Simple_repeat Simple_repeat 1 39 0 7 976 232 262 41 41 chr13 51315964 51316135 -68968177 + (TATG)n Simple_repeat Simple_repeat 3 173 0 7 976 235 244 0 0 chr13 51317409 51317454 -68966858 - ID SINE ID -178 46 2 7 976 261 338 43 108 chr13 51317493 51317725 -68966587 + MLT2C1 LTR ERVL 135 351 -46 7 976 578 305 70 59 chr13 51317866 51318138 -68966174 - MTEa LTR MaLR -102 277 3 7 976 469 304 109 32 chr13 51318468 51318932 -68965380 - L1ME2 LINE L1 -91 6353 5843 7 976 1127 327 89 19 chr13 51318957 51319531 -68964781 + Lx8 LINE L1 6852 7465 -8 7 976 1169 55 21 0 chr13 51319556 51319701 -68964611 + B1_Mus1 SINE Alu 1 148 0 7 976 2297 101 3 0 chr13 51319729 51320046 -68964266 + ORR1A3 LTR MaLR 1 318 -8 7 976 389 279 81 31 chr13 51320282 51320425 -68963887 - ID_B1 SINE B4 -7 217 58 7 976 358 292 98 6 chr13 51320502 51320683 -68963629 - L1ME2 LINE L1 -860 5584 5385 7 976 27 29 0 0 chr13 51321273 51321307 -68963005 + AT_rich Low_complexity Low_complexity 1 34 0 7 976 476 316 74 32 chr13 51322661 51322877 -68961435 - MER31B LTR ERV1 -112 354 130 7 976 435 294 11 38 chr13 51322947 51323131 -68961181 + GA-rich Low_complexity Low_complexity 1 179 0 7 976 1087 171 102 0 chr13 51323202 51323407 -68960905 - URR1A DNA MER1_type 0 226 1 7 976 195 100 0 0 chr13 51323615 51323645 -68960667 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 976 831 253 123 9 chr13 51323655 51323874 -68960438 - B4A SINE B4 -2 290 47 7 976 254 216 0 0 chr13 51324223 51324274 -68960038 - B4A SINE B4 -2 290 240 7 976 227 310 14 0 chr13 51324313 51324384 -68959928 - B4A SINE B4 -217 75 4 7 976 679 273 146 4 chr13 51325825 51326079 -68958233 + B4A SINE B4 1 290 -2 7 976 1904 147 65 60 chr13 51326170 51326604 -68957708 - RMER10A LTR ERVL -3 439 4 7 976 200 34 0 33 chr13 51327242 51327272 -68957040 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 976 300 172 224 1 chr13 51327735 51327859 -68956453 - PB1D10 SINE Alu 0 149 3 7 976 313 326 99 95 chr13 51328139 51328378 -68955934 + MLT1A LTR MaLR 46 284 -81 7 976 1278 113 48 0 chr13 51328671 51328857 -68955455 - B2_Mm2 SINE B2 0 195 1 7 976 468 0 0 0 chr13 51329020 51329072 -68955240 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 976 638 308 56 44 chr13 51329075 51329215 -68955097 - B4A SINE B4 -15 277 135 7 976 384 104 0 0 chr13 51329215 51329282 -68955030 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 7 976 638 308 56 44 chr13 51329282 51329392 -68954920 - B4A SINE B4 -158 134 25 7 976 667 207 31 77 chr13 51329634 51329828 -68954484 + RCHARR1 DNA MER1_type 556 740 -234 7 976 653 307 6 12 chr13 51329840 51330005 -68954307 - RSINE1 SINE B4 0 165 2 7 976 607 187 82 0 chr13 51330005 51330137 -68954175 + RCHARR1 DNA MER1_type 727 869 -105 7 976 295 320 10 0 chr13 51330761 51330858 -68953454 - MER20 DNA MER1_type -33 186 89 7 976 301 217 17 0 chr13 51330873 51330933 -68953379 + B3A SINE B2 2 62 -136 7 976 3933 88 24 4 chr13 51331113 51331658 -68952654 + Lx4A LINE L1 6500 7055 -3 7 976 612 295 50 44 chr13 51331767 51331948 -68952364 - B3A SINE B2 -7 191 10 7 976 462 276 7 0 chr13 51332323 51332431 -68951881 - PB1D10 SINE Alu -8 112 1 7 976 497 200 0 50 chr13 51332717 51332817 -68951495 + PB1D10 SINE Alu 23 117 0 7 976 343 372 61 0 chr13 51332878 51333026 -68951286 + Charlie12 DNA MER1_type 15 171 -2702 7 976 1260 28 7 0 chr13 51333083 51333228 -68951084 + B1_Mus2 SINE Alu 2 147 0 7 976 226 107 36 0 chr13 51333232 51333288 -68951024 + (CAAAAA)n Simple_repeat Simple_repeat 3 60 0 7 976 530 309 72 51 chr13 51334122 51334449 -68949863 - MER21B LTR ERV1 -280 583 13 7 976 561 234 0 0 chr13 51335309 51335564 -68948748 + (TG)n Simple_repeat Simple_repeat 1 255 0 7 976 657 287 132 24 chr13 51335567 51335817 -68948495 - B4 SINE B4 0 292 16 7 976 290 211 41 27 chr13 51336149 51336222 -68948090 - Charlie1 DNA MER1_type 0 2781 2708 7 976 419 261 117 12 chr13 51336297 51336460 -68947852 - Charlie1 DNA MER1_type -241 2540 2361 7 976 421 276 96 6 chr13 51337016 51337173 -68947139 - Charlie1 DNA MER1_type -414 2367 2197 7 976 687 84 0 0 chr13 51337471 51337566 -68946746 + (GGGAGA)n Simple_repeat Simple_repeat 6 100 0 7 976 619 314 17 6 chr13 51337962 51338138 -68946174 - B4A SINE B4 -109 183 6 7 976 606 246 58 0 chr13 51338678 51338816 -68945496 + B3A SINE B2 2 147 -51 7 976 330 45 0 0 chr13 51338816 51338860 -68945452 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 976 392 278 37 75 chr13 51338860 51338908 -68945404 + B2_Mm2 SINE B2 137 181 -14 7 976 784 237 224 18 chr13 51339513 51339603 -68944709 + B4 SINE B4 2 139 -153 7 976 369 0 0 0 chr13 51339603 51339644 -68944668 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 976 784 237 224 18 chr13 51339644 51339781 -68944531 + B4 SINE B4 140 276 -16 7 976 453 19 0 0 chr13 51339792 51339846 -68944466 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 976 1081 163 74 37 chr13 51339874 51340091 -68944221 + URR1B DNA MER1_type 1 225 0 7 976 475 359 38 5 chr13 51340322 51340507 -68943805 - MLT1F2 LTR MaLR -106 454 264 7 976 236 286 214 0 chr13 51340525 51340609 -68943703 - MLT1F2 LTR MaLR -458 102 1 7 976 417 183 0 0 chr13 51340834 51340905 -68943407 + B3A SINE B2 2 72 -126 7 976 1961 130 86 18 chr13 51340905 51341241 -68943071 + ORR1B2 LTR MaLR 1 359 -8 7 976 426 221 195 0 chr13 51341246 51341359 -68942953 + B3 SINE B2 68 202 -14 7 976 21 0 0 0 chr13 51341925 51341946 -68942366 + AT_rich Low_complexity Low_complexity 1 21 0 7 976 372 167 10 176 chr13 51342761 51342863 -68941449 - B1F2 SINE Alu -64 85 1 7 976 481 218 16 98 chr13 51342863 51342904 -68941408 - ID SINE ID -154 70 40 7 976 532 257 28 42 chr13 51342903 51343045 -68941267 - ID_B1 SINE B4 -1 223 84 7 976 540 244 35 0 chr13 51342931 51343046 -68941266 - B1F2 SINE Alu -29 120 2 7 976 279 252 25 93 chr13 51342942 51343060 -68941252 - MT2B LTR ERVL -338 263 154 7 976 467 215 378 25 chr13 51343777 51344052 -68940260 + ORR1E LTR MaLR 1 374 -5 7 976 216 0 0 0 chr13 51344241 51344265 -68940047 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 7 976 1131 48 55 0 chr13 51344266 51344412 -68939900 - B2_Mm2 SINE B2 -41 154 1 7 976 180 284 81 0 chr13 51344575 51344649 -68939663 - L2a LINE L2 -79 3347 3268 7 976 677 241 65 118 chr13 51345195 51345440 -68938872 + B4A SINE B4 26 257 -35 7 976 333 0 0 0 chr13 51345703 51345740 -68938572 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 976 767 270 6 12 chr13 51345744 51345909 -68938403 - B3A SINE B2 -34 164 1 7 976 222 169 0 44 chr13 51346336 51346404 -68937908 + C-rich Low_complexity Low_complexity 2 66 0 7 976 559 302 47 38 chr13 51346762 51346975 -68937337 + B3 SINE B2 2 216 0 7 976 306 70 0 0 chr13 51346978 51346998 -68937314 + (A)n Simple_repeat Simple_repeat 1 20 0 7 976 1137 95 0 0 chr13 51346998 51347145 -68937167 + B1_Mus1 SINE Alu 2 148 0 7 976 306 70 0 0 chr13 51347145 51347167 -68937145 + (A)n Simple_repeat Simple_repeat 1 22 0 7 976 205 386 12 48 chr13 51347181 51347347 -68936965 - L2a LINE L2 0 3426 3267 7 976 636 273 6 46 chr13 51347479 51347636 -68936676 - MTEb LTR MaLR -4 375 201 7 976 2522 88 26 61 chr13 51347636 51348062 -68936250 - IAPLTR2a LTR ERVK 0 411 1 7 976 636 294 31 70 chr13 51348062 51348108 -68936204 - MTEb LTR MaLR -154 225 163 7 976 293 189 11 0 chr13 51348120 51348210 -68936102 + (CAGAGA)n Simple_repeat Simple_repeat 6 96 0 7 976 368 266 95 16 chr13 51348246 51348372 -68935940 - MTEb LTR MaLR -243 136 1 7 976 415 221 63 32 chr13 51349090 51349216 -68935096 - B2_Mm2 SINE B2 -19 176 47 7 976 1160 74 7 0 chr13 51349236 51349385 -68934927 - B2_Mm1t SINE B2 -42 151 2 7 976 242 229 16 16 chr13 51349504 51349566 -68934746 + CT-rich Low_complexity Low_complexity 3 64 0 7 976 628 218 16 82 chr13 51349567 51349745 -68934567 - ID_B1 SINE B4 -39 253 81 7 976 1195 42 0 14 chr13 51349848 51349994 -68934318 - B1_Mus1 SINE Alu 0 148 5 7 976 31 0 0 0 chr13 51349994 51350025 -68934287 + AT_rich Low_complexity Low_complexity 1 31 0 7 976 237 284 81 40 chr13 51350222 51350321 -68933991 - L1MA5 LINE L1 -368 5932 5830 7 976 589 191 6 27 chr13 51350322 51350505 -68933807 + CT-rich Low_complexity Low_complexity 2 180 0 7 976 240 184 0 0 chr13 51350594 51350643 -68933669 + B3 SINE B2 168 216 0 7 976 2492 130 74 0 chr13 51350702 51351094 -68933218 + MTC LTR MaLR 1 421 0 7 976 449 267 0 0 chr13 51351166 51351282 -68933030 + L1M2 LINE L1 5380 5495 -805 7 976 1748 172 21 62 chr13 51351819 51352159 -68932153 - ORR1D1 LTR MaLR -48 326 1 7 976 625 229 6 125 chr13 51352734 51352894 -68931418 + B3 SINE B2 45 190 -26 8 976 443 229 43 0 chr13 51353171 51353479 -68930833 + (TG)n Simple_repeat Simple_repeat 1 321 0 8 976 1021 243 79 32 chr13 51353482 51353759 -68930553 - B4A SINE B4 -2 290 1 8 976 1362 260 35 14 chr13 51354951 51355298 -68929014 + ORR1D2 LTR MaLR 7 360 -10 8 976 189 362 150 0 chr13 51355484 51355611 -68928701 - L2a LINE L2 -1 3425 3280 8 976 532 260 86 55 chr13 51356609 51356772 -68927540 + ID_B1 SINE B4 5 172 -52 8 976 1199 196 67 0 chr13 51357037 51357261 -68927051 - RLTR42 LTR ERVK 0 239 1 8 976 4792 179 77 19 chr13 51357263 51358319 -68925993 - RLTR42-int LTR ERVK -2 5520 4404 8 976 4073 177 18 42 chr13 51358335 51359163 -68925149 - RLTR42-int LTR ERVK -2210 3312 2505 8 976 2137 154 21 134 chr13 51359137 51359706 -68924606 - RLTR42-int LTR ERVK -2969 2553 2049 8 976 5798 177 59 17 chr13 51359706 51361083 -68923229 - Lx6 LINE L1 -706 6754 5311 8 976 3154 0 5 85 chr13 51361083 51361482 -68922830 - IAPLTR1_Mm LTR ERVK 0 367 1 8 976 29476 20 1 1 chr13 51361482 51364756 -68919556 - IAPEz-int LTR ERVK 0 6481 3210 8 976 8260 59 130 30 chr13 51364755 51365943 -68918369 - IAPEz-int LTR ERVK -5168 1313 8 8 976 3154 0 5 85 chr13 51365943 51366342 -68917970 - IAPLTR1_Mm LTR ERVK 0 367 1 8 976 1329 113 0 5 chr13 51366370 51366556 -68917756 - B2_Mm2 SINE B2 -10 185 1 8 976 2784 152 2 75 chr13 51366556 51367117 -68917195 - Lx6 LINE L1 -582 5298 4779 8 976 485 174 11 44 chr13 51367117 51367207 -68917105 - MTE2b LTR MaLR -292 87 1 8 976 721 258 35 23 chr13 51367761 51367932 -68916380 + B3 SINE B2 33 205 -11 8 976 21 0 0 0 chr13 51368106 51368127 -68916185 + AT_rich Low_complexity Low_complexity 1 21 0 8 976 324 0 0 0 chr13 51368499 51368535 -68915777 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 976 1081 283 39 28 chr13 51368550 51368834 -68915478 - B4A SINE B4 -4 288 2 8 976 2016 66 4 8 chr13 51369127 51369387 -68914925 - RLTR10-int LTR ERVK -1688 299 41 8 976 627 86 0 21 chr13 51369403 51369498 -68914814 - RLTR10 LTR ERVK -4 386 294 8 976 3124 34 2 47 chr13 51369500 51369904 -68914408 - RLTR10 LTR ERVK -4 386 1 8 976 323 184 159 11 chr13 51369989 51370077 -68914235 + L1MEg LINE L1 1856 1956 -4128 8 976 402 21 0 0 chr13 51371288 51371335 -68912977 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 976 590 280 35 14 chr13 51371496 51371641 -68912671 + B4 SINE B4 27 174 -118 8 976 470 308 69 7 chr13 51372021 51372165 -68912147 + B4 SINE B4 138 290 -2 8 976 489 17 0 0 chr13 51372768 51372826 -68911486 + (CA)n Simple_repeat Simple_repeat 1 58 0 8 976 313 319 102 81 chr13 51373007 51373379 -68910933 - L1MD2 LINE L1 -377 5982 5603 8 976 1861 186 9 15 chr13 51373635 51373974 -68910338 + RLTR28 LTR ERVL 177 513 -11 8 976 1173 176 80 24 chr13 51374310 51374561 -68909751 + RMER10B LTR ERVL 1 265 -133 8 976 273 158 41 31 chr13 51374564 51374662 -68909650 + CT-rich Low_complexity Low_complexity 1 99 0 8 976 771 142 48 54 chr13 51374662 51374848 -68909464 + RMER10B LTR ERVL 194 378 -20 8 976 198 0 0 0 chr13 51375010 51375032 -68909280 + (A)n Simple_repeat Simple_repeat 1 22 0 8 976 453 288 37 101 chr13 51375037 51375226 -68909086 + B4A SINE B4 12 188 -104 8 976 575 250 94 62 chr13 51375996 51376046 -68908266 + B4A SINE B4 2 46 -246 8 976 2259 149 5 53 chr13 51376046 51376464 -68907848 + RMER10B LTR ERVL 1 398 0 8 976 575 250 94 62 chr13 51376464 51376599 -68907713 + B4A SINE B4 47 193 -99 8 976 3255 43 23 8 chr13 51376599 51376993 -68907319 - MTB LTR MaLR 0 400 1 8 976 838 187 13 0 chr13 51377358 51377508 -68906804 + RSINE1 SINE B4 2 153 -12 8 976 279 280 125 14 chr13 51377563 51377694 -68906618 - RMER21B LTR ERV1 -263 684 459 8 976 344 145 0 28 chr13 51377989 51378060 -68906252 + CT-rich Low_complexity Low_complexity 3 71 0 8 976 449 292 20 46 chr13 51378663 51378814 -68905498 - B1F SINE Alu 0 149 3 8 976 409 295 29 11 chr13 51378910 51379085 -68905227 + L1M3 LINE L1 4711 4888 -1252 8 976 453 50 0 0 chr13 51379285 51379345 -68904967 + (GA)n Simple_repeat Simple_repeat 2 61 0 8 976 864 201 17 25 chr13 51379510 51379703 -68904609 - B3A SINE B2 -7 186 2 8 976 359 308 63 69 chr13 51379703 51380021 -68904291 + L1M3 LINE L1 5009 5324 -816 8 976 286 243 9 3 chr13 51380036 51380098 -68904214 + B4A SINE B4 35 98 -194 8 977 777 232 82 5 chr13 51380327 51380522 -68903790 + B3 SINE B2 7 216 0 8 977 376 336 14 0 chr13 51380876 51381019 -68903293 + L1MD1 LINE L1 5754 5898 -344 8 977 363 314 143 45 chr13 51381304 51381527 -68902785 + MLT1E2 LTR MaLR 56 300 -327 8 977 589 167 56 48 chr13 51381679 51381805 -68902507 - RMER12 LTR ERVK -156 1166 1040 8 977 396 0 0 0 chr13 51381827 51381871 -68902441 + (TC)n Simple_repeat Simple_repeat 1 44 0 8 977 4520 150 25 31 chr13 51381872 51382095 -68902217 - RMER12 LTR ERVK -441 881 668 8 977 1120 48 7 14 chr13 51382095 51382242 -68902070 - B1_Mm SINE Alu 0 147 2 8 977 4520 150 25 31 chr13 51382242 51382821 -68901491 - RMER12 LTR ERVK -655 667 84 8 977 207 262 60 48 chr13 51382905 51382989 -68901323 + L3 LINE CR1 3987 4071 -418 8 977 570 276 20 20 chr13 51383115 51383311 -68901001 - B3A SINE B2 0 198 3 8 977 288 0 0 0 chr13 51383761 51383793 -68900519 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 977 653 268 12 60 chr13 51383800 51383967 -68900345 - B3A SINE B2 -38 160 2 8 977 1480 238 57 17 chr13 51384021 51384379 -68899933 + MTD LTR MaLR 20 378 -41 8 977 273 267 100 71 chr13 51384666 51384857 -68899455 - MTD LTR MaLR 0 419 169 8 977 987 112 12 12 chr13 51385805 51385976 -68898336 + (TTCC)n Simple_repeat Simple_repeat 3 173 0 8 977 29 28 0 0 chr13 51385991 51386027 -68898285 + AT_rich Low_complexity Low_complexity 1 36 0 8 977 342 0 0 0 chr13 51386028 51386066 -68898246 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 977 449 270 104 0 chr13 51386067 51386182 -68898130 - RSINE1 SINE B4 -28 137 11 8 977 869 218 11 0 chr13 51386192 51386366 -68897946 - ID_B1 SINE B4 -1 223 48 8 977 374 271 78 65 chr13 51386761 51386915 -68897397 - B4A SINE B4 -136 156 1 8 977 370 286 42 0 chr13 51387019 51387138 -68897174 + Tigger5 DNA MER2_type 2140 2263 -143 8 977 309 169 0 0 chr13 51387291 51387350 -68896962 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 977 767 40 10 0 chr13 51387708 51387807 -68896505 + (TCTA)n Simple_repeat Simple_repeat 2 101 0 8 977 373 226 5 9 chr13 51387807 51387900 -68896412 - B1_Mur1 SINE Alu -7 140 49 8 977 334 293 0 0 chr13 51387893 51387968 -68896344 - ID2 SINE ID 0 83 9 8 977 477 0 0 0 chr13 51388158 51388211 -68896101 + (GA)n Simple_repeat Simple_repeat 1 53 0 8 977 320 326 81 27 chr13 51389491 51389639 -68894673 + RSINE1 SINE B4 3 158 -7 8 977 285 167 0 0 chr13 51389639 51389693 -68894619 + (CACCAT)n Simple_repeat Simple_repeat 4 57 0 8 977 1170 76 0 0 chr13 51389939 51390083 -68894229 + B1_Mm SINE Alu 4 147 0 8 977 300 331 49 31 chr13 51390085 51390247 -68894065 + L1MEg LINE L1 1805 1969 -4115 8 977 640 269 35 96 chr13 51390309 51390575 -68893737 - B4A SINE B4 -24 268 19 8 977 573 323 66 26 chr13 51390576 51391002 -68893310 - L1M2 LINE L1 -528 5763 5321 8 977 507 33 0 0 chr13 51391241 51391302 -68893010 + (TCC)n Simple_repeat Simple_repeat 1 61 0 8 977 237 185 0 0 chr13 51391616 51391681 -68892631 + (CAGAGA)n Simple_repeat Simple_repeat 2 66 0 8 977 304 111 0 31 chr13 51391702 51391767 -68892545 + (TG)n Simple_repeat Simple_repeat 1 63 0 8 977 255 114 0 0 chr13 51391766 51391810 -68892502 + (GA)n Simple_repeat Simple_repeat 1 44 0 8 977 468 0 0 0 chr13 51391917 51391969 -68892343 + (GA)n Simple_repeat Simple_repeat 1 52 0 8 977 621 188 55 215 chr13 51393049 51393286 -68891026 + MTEa LTR MaLR 18 216 -163 8 977 354 96 30 74 chr13 51393343 51393478 -68890834 + (TATAA)n Simple_repeat Simple_repeat 1 129 0 8 977 697 242 105 41 chr13 51393505 51393677 -68890635 - B3A SINE B2 -15 183 1 8 977 746 263 23 0 chr13 51393678 51393849 -68890463 + MTEa LTR MaLR 203 377 -2 8 977 542 179 0 0 chr13 51394201 51394285 -68890027 - RMER15 LTR ERVL -1 574 491 8 977 915 216 22 104 chr13 51395094 51395316 -68888996 + B3 SINE B2 1 204 -12 8 977 3261 65 0 5 chr13 51395316 51395718 -68888594 - MTB LTR MaLR 0 400 1 8 977 330 26 0 0 chr13 51396100 51396139 -68888173 + (A)n Simple_repeat Simple_repeat 1 39 0 8 977 718 96 50 42 chr13 51396153 51396273 -68888039 + B1_Mur4 SINE Alu 29 149 -1 8 977 1329 248 53 11 chr13 51396485 51396840 -68887472 + ORR1D2 LTR MaLR 1 370 0 8 977 395 306 46 26 chr13 51397716 51397867 -68886445 + RSINE1 SINE B4 4 157 -8 8 977 248 0 0 30 chr13 51397883 51397916 -68886396 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 8 977 370 296 8 42 chr13 51397949 51398069 -68886243 + PB1D10 SINE Alu 1 116 -1 8 977 379 229 57 48 chr13 51398136 51398260 -68886052 + MT2B LTR ERVL 154 278 -323 8 977 827 122 30 0 chr13 51398154 51398285 -68886027 + B1_Mus2 SINE Alu 12 146 -1 8 977 282 233 25 16 chr13 51398391 51398513 -68885799 + C-rich Low_complexity Low_complexity 2 124 0 8 977 932 238 78 60 chr13 51398577 51398859 -68885453 + B4A SINE B4 2 288 -4 8 977 459 0 0 0 chr13 51398973 51399024 -68885288 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 977 410 256 171 0 chr13 51399025 51399142 -68885170 - RSINE1 SINE B4 -28 137 1 8 977 734 150 150 0 chr13 51399178 51399305 -68885007 + B1_Mus2 SINE Alu 1 146 -1 8 977 288 77 0 0 chr13 51399309 51399348 -68884964 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 8 977 788 191 0 6 chr13 51399358 51399537 -68884775 + GA-rich Low_complexity Low_complexity 2 179 0 8 977 273 119 0 0 chr13 51399563 51399605 -68884707 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 8 977 809 185 0 6 chr13 51399619 51399798 -68884514 + GA-rich Low_complexity Low_complexity 2 179 0 8 977 257 231 0 25 chr13 51399824 51399904 -68884408 + GA-rich Low_complexity Low_complexity 3 80 0 8 977 352 292 68 27 chr13 51400476 51400624 -68883688 - HAL1-3A_ME LINE L1 -419 2439 2286 8 977 316 209 164 0 chr13 51400652 51400719 -68883593 - ID4_ SINE ID -4 79 2 8 977 325 300 11 0 chr13 51400747 51400837 -68883475 - B1_Mus2 SINE Alu -7 140 50 9 977 563 306 9 92 chr13 51401488 51401715 -68882597 + MTEb LTR MaLR 170 377 -2 9 977 251 308 209 51 chr13 51401784 51402037 -68882275 + MLT1J1-int LTR MaLR 1062 1354 -33 9 977 322 313 93 56 chr13 51402085 51402436 -68881876 + MLT1J1 LTR MaLR 44 398 -13 9 977 999 279 25 35 chr13 51403228 51403514 -68880798 - B4A SINE B4 -2 290 8 9 977 584 293 110 53 chr13 51403683 51403892 -68880420 - B4A SINE B4 -62 230 10 9 977 414 0 0 0 chr13 51404192 51404238 -68880074 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 977 270 0 0 0 chr13 51404238 51404267 -68880045 + (GA)n Simple_repeat Simple_repeat 1 30 0 9 977 1266 258 0 70 chr13 51404310 51404582 -68879730 - B4 SINE B4 0 292 38 9 977 1197 210 229 109 chr13 51404582 51405022 -68879290 + MT2A LTR ERVL 1 487 -46 9 977 501 17 0 0 chr13 51405022 51405080 -68879232 + (GA)n Simple_repeat Simple_repeat 1 58 0 9 977 1197 210 229 109 chr13 51405080 51405115 -68879197 + MT2A LTR ERVL 488 532 -1 9 977 1266 258 0 70 chr13 51405115 51405155 -68879157 - B4 SINE B4 -255 37 2 9 977 666 350 48 65 chr13 51405957 51406176 -68878136 + MER74A LTR ERVL 34 255 -303 9 977 1095 241 144 92 chr13 51406176 51406524 -68877788 - ORR1D2 LTR MaLR 0 370 5 9 977 666 357 52 64 chr13 51406524 51406706 -68877606 + MER74A LTR ERVL 256 491 -131 9 977 233 263 79 0 chr13 51406689 51406765 -68877547 + MER74A LTR ERVL 451 532 -26 9 977 818 279 49 101 chr13 51407914 51408221 -68876091 + B4 SINE B4 2 292 0 9 977 590 228 6 0 chr13 51408221 51408379 -68875933 + (CA)n Simple_repeat Simple_repeat 1 159 0 9 977 351 0 0 0 chr13 51408552 51408591 -68875721 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 977 396 0 0 0 chr13 51409265 51409309 -68875003 + (CA)n Simple_repeat Simple_repeat 2 45 0 9 977 833 54 9 0 chr13 51411394 51411505 -68872807 + (TC)n Simple_repeat Simple_repeat 1 112 0 9 977 938 188 301 7 chr13 51411590 51411879 -68872433 + MTE2b LTR MaLR 3 376 -3 9 977 888 288 70 102 chr13 51412482 51412865 -68871447 - MTE2a LTR MaLR -1 378 8 9 977 674 237 22 0 chr13 51413208 51413347 -68870965 - B1_Mur3 SINE Alu -1 148 7 9 977 250 139 58 0 chr13 51413423 51413509 -68870803 + (TCTA)n Simple_repeat Simple_repeat 1 91 0 9 977 324 260 19 9 chr13 51414637 51414742 -68869570 - L1MA4A LINE L1 -389 5914 5809 9 977 465 19 0 0 chr13 51414743 51414797 -68869515 + (TA)n Simple_repeat Simple_repeat 2 55 0 9 977 362 143 0 13 chr13 51414832 51414910 -68869402 + (TG)n Simple_repeat Simple_repeat 1 77 0 9 977 243 200 14 130 chr13 51414934 51415003 -68869309 - B2_Mm2 SINE B2 -134 61 1 9 977 324 355 91 35 chr13 51416053 51416196 -68868116 + MER44B DNA MER2_type 78 228 -322 9 977 216 0 0 0 chr13 51416555 51416579 -68867733 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 9 977 360 0 0 0 chr13 51416653 51416693 -68867619 + (GA)n Simple_repeat Simple_repeat 1 40 0 9 977 755 295 66 4 chr13 51416777 51417019 -68867293 + MER2 DNA MER2_type 89 345 0 9 977 638 269 40 10 chr13 51417019 51417206 -68867106 + MER44B DNA MER2_type 354 546 -4 9 977 189 167 89 0 chr13 51417374 51417464 -68866848 + (CATCC)n Simple_repeat Simple_repeat 3 100 0 9 977 301 281 118 35 chr13 51417487 51417631 -68866681 - HAL1-3A_ME LINE L1 -418 2440 2285 9 977 22 0 0 0 chr13 51417740 51417762 -68866550 + AT_rich Low_complexity Low_complexity 1 22 0 9 977 306 0 0 0 chr13 51417762 51417796 -68866516 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 977 293 197 16 16 chr13 51417799 51417861 -68866451 - B3 SINE B2 -67 149 88 9 977 258 184 0 39 chr13 51418083 51418134 -68866178 + MLT1C LTR MaLR 378 426 -41 9 977 835 333 70 13 chr13 51418382 51418765 -68865547 + MLT-int LTR MaLR 19 423 -1312 9 977 251 377 77 39 chr13 51418794 51419001 -68865311 + MLT-int LTR MaLR 538 752 -983 9 977 274 291 48 63 chr13 51419193 51419324 -68864988 + B4A SINE B4 138 262 -30 9 977 2931 64 34 58 chr13 51419324 51419741 -68864571 + MTB_Mm LTR MaLR 1 407 0 9 977 249 385 6 75 chr13 51419741 51419775 -68864537 + B4 SINE B4 263 292 0 9 977 930 138 0 0 chr13 51419786 51420021 -68864291 + (TAGA)n Simple_repeat Simple_repeat 1 235 0 9 977 371 73 18 0 chr13 51420026 51420081 -68864231 + (GA)n Simple_repeat Simple_repeat 1 56 0 9 977 211 250 19 0 chr13 51420096 51420148 -68864164 + ID4_ SINE ID 30 82 -1 9 977 189 0 0 0 chr13 51420604 51420625 -68863687 + (TC)n Simple_repeat Simple_repeat 2 22 0 9 977 512 296 6 25 chr13 51420680 51420843 -68863469 - RSINE1 SINE B4 -1 164 5 9 977 312 244 21 72 chr13 51421192 51421289 -68863023 + B4 SINE B4 8 99 -193 9 977 228 264 193 0 chr13 51421366 51421506 -68862806 - Lx7 LINE L1 0 7696 7530 9 977 529 315 30 0 chr13 51421640 51421843 -68862469 - Lx7 LINE L1 -367 7329 7121 9 977 673 230 85 24 chr13 51421855 51421978 -68862334 + B4 SINE B4 90 212 -80 9 977 279 54 0 0 chr13 51421978 51422015 -68862297 + (CAAT)n Simple_repeat Simple_repeat 4 40 0 9 977 673 230 85 24 chr13 51422015 51422056 -68862256 + B4 SINE B4 213 263 -29 9 977 447 19 0 0 chr13 51422087 51422139 -68862173 + (CA)n Simple_repeat Simple_repeat 1 52 0 9 977 1148 148 39 0 chr13 51422943 51423125 -68861187 + B2_Mm2 SINE B2 2 190 -5 9 977 423 188 38 0 chr13 51423557 51423637 -68860675 - B4A SINE B4 -208 84 2 9 977 324 376 26 55 chr13 51424123 51424435 -68859877 - Lx8 LINE L1 -16 7457 7155 9 977 225 65 0 0 chr13 51424722 51424753 -68859559 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 977 369 152 45 0 chr13 51424858 51424924 -68859388 + B3A SINE B2 1 69 -129 9 977 486 159 9 18 chr13 51424926 51425035 -68859277 + C-rich Low_complexity Low_complexity 1 108 0 9 977 223 277 11 46 chr13 51425042 51425129 -68859183 + CT-rich Low_complexity Low_complexity 1 84 0 9 977 185 65 0 31 chr13 51425428 51425460 -68858852 + (CCCCCA)n Simple_repeat Simple_repeat 3 33 0 9 977 374 386 38 0 chr13 51426346 51426504 -68857808 - MER115 DNA Tip100 -488 205 42 9 977 1003 224 94 16 chr13 51426963 51427217 -68857095 - B4A SINE B4 -14 278 5 9 977 23 0 0 0 chr13 51427642 51427665 -68856647 + AT_rich Low_complexity Low_complexity 1 23 0 9 977 1031 249 137 21 chr13 51427712 51428040 -68856272 + L1MA6 LINE L1 5816 6154 -146 9 977 306 0 0 0 chr13 51428040 51428074 -68856238 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 977 1031 249 137 21 chr13 51428074 51428176 -68856136 + L1MA6 LINE L1 6155 6295 -5 9 977 233 242 30 0 chr13 51428303 51428369 -68855943 + (TG)n Simple_repeat Simple_repeat 1 68 0 9 977 324 153 54 54 chr13 51428420 51428586 -68855726 + (TCTG)n Simple_repeat Simple_repeat 1 166 0 9 977 468 220 62 83 chr13 51428668 51428812 -68855500 - B4A SINE B4 -151 141 1 9 977 593 285 77 39 chr13 51429471 51429575 -68854737 + B4A SINE B4 1 107 -185 9 977 1072 174 30 64 chr13 51429575 51429808 -68854504 + URR1B DNA MER1_type 1 225 0 9 977 593 281 137 50 chr13 51429808 51429965 -68854347 + B4A SINE B4 108 285 -7 9 977 251 345 48 21 chr13 51430890 51431035 -68853277 + RSINE1 SINE B4 2 150 -15 9 977 327 25 0 0 chr13 51431269 51431309 -68853003 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 977 382 321 98 58 chr13 51431456 51431727 -68852585 + B4A SINE B4 3 289 -3 9 977 202 73 24 24 chr13 51432655 51432697 -68851615 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 9 977 270 0 0 0 chr13 51433546 51433576 -68850736 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 977 257 358 0 0 chr13 51433576 51433657 -68850655 + (CG)n Simple_repeat Simple_repeat 1 81 0 9 977 1001 244 114 0 chr13 51433659 51433905 -68850407 - B4A SINE B4 -3 289 16 9 977 234 279 43 29 chr13 51433844 51433914 -68850398 - ID4_ SINE ID -9 74 4 9 977 638 106 202 0 chr13 51434450 51434554 -68849758 + B2_Mm2 SINE B2 36 160 -35 9 977 998 136 0 30 chr13 51434552 51434719 -68849593 + B2_Mm2 SINE B2 32 193 -2 9 977 536 289 37 43 chr13 51435331 51435494 -68848818 - RSINE1 SINE B4 0 165 4 9 977 2723 156 82 4 chr13 51435519 51436009 -68848303 + RLTR11A LTR ERVK 1 528 0 9 977 466 335 53 73 chr13 51436159 51436667 -68847645 + L1MD LINE L1 2350 2847 -3299 9 977 243 267 144 20 chr13 51436721 51436874 -68847438 + L1MD LINE L1 2963 3134 -3012 9 977 1032 205 5 16 chr13 51436967 51437160 -68847152 - B3A SINE B2 -6 192 2 9 977 465 103 0 0 chr13 51437304 51437372 -68846940 + (TC)n Simple_repeat Simple_repeat 2 69 0 9 977 779 333 35 15 chr13 51437375 51437835 -68846477 + L1MD LINE L1 3519 3987 -2159 9 977 382 227 40 40 chr13 51437859 51437960 -68846352 + B1F1 SINE Alu 1 101 -48 9 977 246 95 0 0 chr13 51437968 51438010 -68846302 + (CCAA)n Simple_repeat Simple_repeat 2 43 0 9 977 468 0 0 0 chr13 51438140 51438192 -68846120 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 977 394 339 128 11 chr13 51438199 51438387 -68845925 + L1MD LINE L1 4164 4373 -1773 9 977 527 214 25 41 chr13 51438400 51438522 -68845790 + RSINE1 SINE B4 1 120 -45 9 977 310 228 186 58 chr13 51438402 51438574 -68845738 + B2_Mm2 SINE B2 2 195 0 9 977 473 203 152 0 chr13 51438601 51438778 -68845534 + L1MD LINE L1 4628 4831 -1315 9 977 361 269 65 59 chr13 51438777 51438963 -68845349 + L1MD1 LINE L1 6002 6188 -54 9 977 1234 221 41 129 chr13 51438980 51439173 -68845139 - MTE2a LTR MaLR 0 379 192 9 977 252 0 0 0 chr13 51439173 51439201 -68845111 + (CTTG)n Simple_repeat Simple_repeat 1 28 0 9 977 1234 221 41 129 chr13 51439201 51439418 -68844894 - MTE2a LTR MaLR -188 191 6 9 977 263 311 22 0 chr13 51439469 51439559 -68844753 + L1MC LINE L1 3913 4004 -2142 9 977 336 327 87 0 chr13 51440037 51440141 -68844171 - RSINE1 SINE B4 -16 149 37 9 977 273 274 0 14 chr13 51440191 51440265 -68844047 - L1M1 LINE L1 -569 5734 5662 9 977 282 205 0 0 chr13 51441976 51442059 -68842253 + GA-rich Low_complexity Low_complexity 2 84 0 9 977 431 70 0 27 chr13 51442575 51442648 -68841664 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 9 977 522 266 111 86 chr13 51442648 51442663 -68841649 - B4 SINE B4 -10 282 272 9 977 366 23 0 0 chr13 51442663 51442706 -68841606 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 977 522 266 111 86 chr13 51442706 51442960 -68841352 - B4 SINE B4 -21 271 6 9 977 498 305 107 14 chr13 51443094 51443310 -68841002 - MER2 DNA MER2_type -100 245 10 9 977 226 273 0 18 chr13 51443656 51443712 -68840600 + G-rich Low_complexity Low_complexity 2 56 0 9 977 590 270 325 20 chr13 51443746 51444027 -68840285 - MTEa LTR MaLR 0 379 9 9 977 393 81 0 0 chr13 51444032 51444094 -68840218 + (CA)n Simple_repeat Simple_repeat 2 63 0 9 977 403 202 71 0 chr13 51444105 51444204 -68840108 - L1MA7 LINE L1 -51 6240 6135 9 977 714 281 118 36 chr13 51444354 51444686 -68839626 - L1MA7 LINE L1 -373 5918 5560 9 977 414 0 0 0 chr13 51445787 51445833 -68838479 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 977 744 260 12 17 chr13 51445834 51446006 -68838306 - B4A SINE B4 -119 173 3 1 977 421 275 90 18 chr13 51446567 51446678 -68837634 - RSINE1 SINE B4 -45 120 2 1 977 1907 112 237 20 chr13 51446902 51447248 -68837064 - MTC LTR MaLR 0 421 1 1 977 981 235 91 16 chr13 51447306 51447548 -68836764 - MTE2b LTR MaLR -119 260 1 1 977 1478 209 129 44 chr13 51447726 51448177 -68836135 - RLTR20B2 LTR ERVK -44 516 28 1 977 417 329 101 6 chr13 51448197 51448356 -68835956 + MLT2B4 LTR ERVL 315 488 -68 1 977 663 298 41 73 chr13 51448848 51449271 -68835041 - RLTR11A2 LTR ERVK -34 494 1 1 977 291 219 80 27 chr13 51449272 51449283 -68835029 + RMER15 LTR ERVL 497 506 -69 1 977 219 36 0 0 chr13 51449283 51449311 -68835001 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 977 291 219 80 27 chr13 51449311 51449374 -68834938 + RMER15 LTR ERVL 507 575 0 1 977 462 257 36 27 chr13 51449782 51449894 -68834418 - PB1D7 SINE Alu -5 115 3 1 977 431 263 144 30 chr13 51449895 51450055 -68834257 + B3A SINE B2 33 213 -3 1 977 266 238 54 7 chr13 51450189 51450280 -68834032 + L1M5 LINE L1 5786 5877 -285 1 977 273 280 185 22 chr13 51450287 51450327 -68833985 - LTR48B LTR ERV1 -44 600 559 1 977 207 0 0 0 chr13 51450327 51450350 -68833962 + (CCAA)n Simple_repeat Simple_repeat 1 23 0 1 977 273 280 185 22 chr13 51450350 51450444 -68833868 - LTR48B LTR ERV1 -86 558 444 1 977 189 0 0 0 chr13 51450490 51450511 -68833801 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 977 395 235 0 12 chr13 51450518 51450600 -68833712 - B4A SINE B4 -32 260 180 1 977 195 259 0 0 chr13 51451279 51451337 -68832975 + (TCTG)n Simple_repeat Simple_repeat 4 61 0 1 977 335 248 47 19 chr13 51451645 51451752 -68832560 + PB1D10 SINE Alu 3 112 -5 1 977 290 207 0 17 chr13 51451791 51451850 -68832462 - U2 snRNA snRNA -130 58 1 1 977 21 36 0 0 chr13 51451859 51451887 -68832425 + AT_rich Low_complexity Low_complexity 1 28 0 1 977 314 242 0 0 chr13 51452411 51452477 -68831835 + RSINE1 SINE B4 1 66 -99 1 977 260 250 0 18 chr13 51452471 51452528 -68831784 - MTE2a LTR MaLR -72 307 252 1 977 1930 282 56 32 chr13 51452669 51453317 -68830995 + RCHARR1 DNA MER1_type 308 970 -4 1 977 316 279 0 0 chr13 51453524 51453592 -68830720 + PB1D10 SINE Alu 44 111 -6 1 977 254 257 14 0 chr13 51453628 51453698 -68830614 + L1MC LINE L1 4722 4792 -1354 1 977 1543 125 9 0 chr13 51453698 51453922 -68830390 + URR1A DNA MER1_type 1 226 0 1 977 431 148 0 11 chr13 51453937 51454026 -68830286 + (TG)n Simple_repeat Simple_repeat 2 89 0 1 977 466 314 8 24 chr13 51454075 51454202 -68830110 + RMER30 DNA MER1_type 78 202 0 1 977 344 255 555 0 chr13 51455101 51455208 -68829104 + B4 SINE B4 49 214 -78 1 977 203 0 37 0 chr13 51455208 51455235 -68829077 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 1 977 344 352 9 0 chr13 51455235 51455309 -68829003 + B4 SINE B4 215 289 -3 1 977 396 0 0 0 chr13 51455324 51455368 -68828944 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 977 474 18 0 0 chr13 51455368 51455422 -68828890 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 977 209 260 0 20 chr13 51455873 51455924 -68828388 + G-rich Low_complexity Low_complexity 4 53 0 1 977 827 237 197 30 chr13 51456296 51456757 -68827555 - L1MC1 LINE L1 -282 6051 5514 1 977 304 278 66 56 chr13 51457335 51457533 -68826779 + B4A SINE B4 7 206 -86 1 977 250 241 0 18 chr13 51457534 51457589 -68826723 + GA-rich Low_complexity Low_complexity 2 55 0 1 977 272 356 0 0 chr13 51457591 51457664 -68826648 - ID4_ SINE ID -9 74 2 1 977 289 172 34 17 chr13 51457687 51457746 -68826566 - PB1 SINE Alu -2 125 66 1 977 186 43 0 0 chr13 51457947 51457970 -68826342 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 1 977 726 304 24 32 chr13 51458945 51459193 -68825119 + B4A SINE B4 17 262 -30 1 977 371 56 19 0 chr13 51459193 51459247 -68825065 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 977 180 241 36 36 chr13 51459335 51459391 -68824921 + MER5B DNA MER1_type 1 56 -122 1 977 242 265 162 0 chr13 51459403 51459471 -68824841 - ID_B1 SINE B4 -6 218 140 1 977 827 207 55 48 chr13 51459477 51459779 -68824533 + RMER17C LTR ERVK 1 410 0 1 977 414 356 8 8 chr13 51459781 51459911 -68824401 - ID_B1 SINE B4 -93 131 2 1 977 493 258 24 136 chr13 51460120 51460326 -68823986 + B3A SINE B2 1 183 -15 1 977 584 142 36 36 chr13 51460332 51460471 -68823841 + Lx9 LINE L1 7498 7636 -8 1 977 680 197 8 15 chr13 51460532 51460666 -68823646 - B1F SINE Alu -2 147 15 1 977 324 293 42 48 chr13 51460540 51460705 -68823607 - B4A SINE B4 -74 218 55 1 977 705 321 40 4 chr13 51461963 51462238 -68822074 + L1MB3 LINE L1 5849 6133 -50 1 977 764 179 272 0 chr13 51462249 51462411 -68821901 - B3 SINE B2 -10 206 1 1 977 469 251 65 30 chr13 51462676 51462844 -68821468 - HAL1-2a_MD LINE L1 -504 2520 2347 1 977 324 0 0 0 chr13 51462993 51463029 -68821283 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 977 954 282 42 15 chr13 51463051 51463310 -68821002 - B4 SINE B4 -22 270 5 1 977 326 129 81 0 chr13 51463715 51463777 -68820535 - RMER15 LTR ERVL 0 575 509 1 977 537 124 112 26 chr13 51463816 51463932 -68820380 + RMER21B LTR ERV1 300 425 -417 1 977 313 195 0 89 chr13 51464075 51464165 -68820147 - RLTR28 LTR ERVL -21 503 422 1 977 1131 194 51 24 chr13 51464207 51464461 -68819851 - RLTR28 LTR ERVL -260 264 4 1 977 185 132 26 0 chr13 51464694 51464732 -68819580 + C-rich Low_complexity Low_complexity 5 43 0 1 977 260 350 8 8 chr13 51464742 51464866 -68819446 + CT-rich Low_complexity Low_complexity 2 125 0 1 977 315 0 0 0 chr13 51464904 51464939 -68819373 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 977 298 272 0 171 chr13 51465015 51465126 -68819186 + MTEb LTR MaLR 1 92 -287 1 977 227 309 37 0 chr13 51465289 51465370 -68818942 + MTEb LTR MaLR 288 371 -8 1 977 284 279 35 35 chr13 51465465 51465580 -68818732 - L1MA6 LINE L1 -274 6026 5912 1 977 266 308 0 42 chr13 51465571 51465666 -68818646 + L1M2 LINE L1 5659 5749 -548 1 977 307 288 85 39 chr13 51465715 51465845 -68818467 + B1F1 SINE Alu 3 138 -11 1 977 288 0 0 0 chr13 51466571 51466603 -68817709 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1 977 266 208 0 0 chr13 51466935 51466983 -68817329 - ORR1E LTR MaLR -311 48 1 1 977 501 276 100 43 chr13 51467035 51467266 -68817046 + MLT1E LTR MaLR 361 604 -49 1 977 588 312 106 36 chr13 51467270 51467715 -68816597 - L1MB7 LINE L1 -4 6180 5705 1 977 424 167 35 12 chr13 51468510 51468680 -68815632 + (TG)n Simple_repeat Simple_repeat 2 175 0 1 977 266 213 59 35 chr13 51468691 51468861 -68815451 + (TG)n Simple_repeat Simple_repeat 2 175 0 1 977 357 231 13 13 chr13 51469139 51469218 -68815094 + Tigger5 DNA MER2_type 58 136 -2270 1 977 1085 301 140 53 chr13 51469373 51469851 -68814461 + L1MD3 LINE L1 6666 7124 -871 1 977 420 20 0 0 chr13 51469851 51469900 -68814412 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 977 1085 301 140 53 chr13 51469900 51470459 -68813853 + L1MD3 LINE L1 7125 7792 -203 1 977 559 281 96 85 chr13 51470533 51470793 -68813519 - MTE2a LTR MaLR -2 377 115 1 977 333 174 0 0 chr13 51470833 51470902 -68813410 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 977 678 313 0 0 chr13 51471366 51471511 -68812801 + RSINE1 SINE B4 3 147 -18 1 977 222 37 0 0 chr13 51471511 51471538 -68812774 + (TATG)n Simple_repeat Simple_repeat 2 28 0 1 977 678 313 0 0 chr13 51471538 51471555 -68812757 + RSINE1 SINE B4 148 164 -1 1 977 2711 61 0 3 chr13 51471674 51472002 -68812310 + ORR1A2 LTR MaLR 1 327 0 1 977 433 282 98 43 chr13 51472302 51472465 -68811847 + MLT1A1 LTR MaLR 235 406 -2 1 977 350 313 118 35 chr13 51472578 51472833 -68811479 + B4A SINE B4 5 280 -12 1 977 366 23 0 0 chr13 51472849 51472892 -68811420 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 977 204 40 0 0 chr13 51473246 51473271 -68811041 + (C)n Simple_repeat Simple_repeat 1 25 0 1 977 428 243 62 155 chr13 51474262 51474584 -68809728 + B4 SINE B4 1 292 0 1 977 477 0 0 0 chr13 51475406 51475459 -68808853 + (TTTTC)n Simple_repeat Simple_repeat 1 53 0 1 977 1022 93 17 17 chr13 51475459 51475634 -68808678 + (TTTCC)n Simple_repeat Simple_repeat 5 179 0 1 977 1345 271 101 10 chr13 51475927 51476322 -68807990 + Lx8 LINE L1 6214 6644 -829 1 977 471 226 95 19 chr13 51476442 51476600 -68807712 + RMER15 LTR ERVL 406 575 0 1 977 468 0 0 0 chr13 51476667 51476719 -68807593 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 977 221 379 0 0 chr13 51476816 51476911 -68807401 + (TATG)n Simple_repeat Simple_repeat 2 96 0 1 977 472 217 74 57 chr13 51477396 51477518 -68806794 - B3 SINE B2 -86 130 7 1 977 216 0 0 0 chr13 51477574 51477598 -68806714 + (T)n Simple_repeat Simple_repeat 1 24 0 1 977 260 235 99 16 chr13 51477643 51477764 -68806548 - LTR16E1 LTR ERVL -15 523 393 1 977 385 246 127 134 chr13 51477987 51478278 -68806034 - B4A SINE B4 0 292 4 1 977 2250 151 134 8 chr13 51478352 51478747 -68805565 - RLTR41 LTR ERV1 -1 445 1 1 977 669 283 205 123 chr13 51478893 51479157 -68805155 + MT2B LTR ERVL 1 342 -242 1 977 794 143 45 0 chr13 51479157 51479290 -68805022 - B1_Mus1 SINE Alu -9 139 1 1 977 867 236 52 60 chr13 51479290 51479543 -68804769 + MT2B LTR ERVL 327 576 -25 1 977 292 196 62 14 chr13 51479553 51479698 -68804614 + (TA)n Simple_repeat Simple_repeat 2 153 0 1 977 2789 170 62 24 chr13 51479708 51480244 -68804068 - RLTR20B2 LTR ERVK -4 556 1 1 977 459 92 0 0 chr13 51480268 51480333 -68803979 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 977 334 277 98 10 chr13 51480430 51480532 -68803780 + MER5A DNA MER1_type 59 169 -20 1 977 398 321 97 65 chr13 51480669 51480959 -68803353 + LTR31 LTR ERV1 78 376 -243 1 977 212 0 36 0 chr13 51481445 51481473 -68802839 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 977 1856 217 124 19 chr13 51481511 51481589 -68802723 - RLTR20C LTR ERVK 0 534 446 1 977 318 50 0 0 chr13 51481589 51481629 -68802683 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 977 1856 217 124 19 chr13 51481629 51482033 -68802279 - RLTR20C LTR ERVK -89 445 3 1 977 214 148 0 36 chr13 51482033 51482089 -68802223 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 977 228 356 0 0 chr13 51482175 51482262 -68802050 + L1MA8 LINE L1 4792 4878 -1265 1 977 978 239 121 0 chr13 51482286 51482525 -68801787 + B4A SINE B4 15 282 -10 1 977 228 280 0 0 chr13 51482533 51482583 -68801729 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 977 741 175 25 0 chr13 51482586 51482831 -68801481 + (CATA)n Simple_repeat Simple_repeat 1 251 0 1 977 396 0 0 0 chr13 51482842 51482886 -68801426 + (AATAG)n Simple_repeat Simple_repeat 3 46 0 1 977 1025 286 39 24 chr13 51482886 51483569 -68800743 + L1MA8 LINE L1 4910 5610 -702 1 977 715 278 50 0 chr13 51483613 51483793 -68800519 + B4A SINE B4 102 290 -2 1 977 519 293 24 97 chr13 51483797 51484137 -68800175 + L1MA8 LINE L1 5592 5906 -385 1 977 264 250 0 0 chr13 51484156 51484236 -68800076 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 977 2215 195 74 21 chr13 51484342 51484446 -68799866 - RMER5 LTR ERV1 -35 499 389 1 977 192 40 0 0 chr13 51484446 51484471 -68799841 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 977 2215 195 74 21 chr13 51484471 51484837 -68799475 - RMER5 LTR ERV1 -146 388 5 1 977 236 341 0 0 chr13 51486103 51486185 -68798127 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 977 231 197 123 62 chr13 51486621 51486686 -68797626 + LTR33A LTR ERVL 58 126 -394 1 977 197 218 17 52 chr13 51487342 51487400 -68796912 - L2c LINE L2 -226 3161 3106 1 977 233 248 223 33 chr13 51487400 51487521 -68796791 + B4A SINE B4 80 223 -69 1 977 410 279 9 19 chr13 51487418 51487524 -68796788 + PB1D10 SINE Alu 13 117 0 1 977 270 0 0 0 chr13 51487759 51487789 -68796523 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 977 468 0 0 0 chr13 51487957 51488009 -68796303 + (GGA)n Simple_repeat Simple_repeat 1 52 0 1 977 305 310 70 119 chr13 51488680 51488907 -68795405 - ORR1E LTR MaLR -57 302 87 1 977 646 248 13 13 chr13 51489227 51489378 -68794934 + ID_B1 SINE B4 74 224 0 1 977 205 143 0 45 chr13 51489383 51489427 -68794885 + A-rich Low_complexity Low_complexity 2 43 0 1 977 580 250 0 172 chr13 51489628 51489802 -68794510 - B1F1 SINE Alu -2 147 4 1 977 243 0 0 0 chr13 51489824 51489851 -68794461 + (TAGA)n Simple_repeat Simple_repeat 1 27 0 1 977 204 40 0 0 chr13 51489869 51489894 -68794418 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 977 489 17 0 0 chr13 51489935 51489993 -68794319 + (GTTTG)n Simple_repeat Simple_repeat 2 59 0 1 977 630 139 217 0 chr13 51489993 51490108 -68794204 - B1_Mur4 SINE Alu -10 140 1 1 977 878 283 73 4 chr13 51490346 51490580 -68793732 + B4A SINE B4 43 292 0 1 977 372 77 0 0 chr13 51490611 51490663 -68793649 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 977 333 148 19 0 chr13 51490689 51490743 -68793569 + HAL1 LINE L1 1555 1609 -898 1 977 299 84 0 15 chr13 51491551 51491614 -68792698 + L1_Mus2 LINE L1 6519 6580 -2 1 977 32 0 0 0 chr13 51492069 51492101 -68792211 + AT_rich Low_complexity Low_complexity 1 32 0 1 977 243 267 40 0 chr13 51492228 51492303 -68792009 + (TATG)n Simple_repeat Simple_repeat 4 81 0 1 977 924 316 3 50 chr13 51492375 51492672 -68791640 + B4 SINE B4 10 292 0 1 977 304 282 0 49 chr13 51492718 51492800 -68791512 - L1MD2 LINE L1 -324 6035 5958 1 977 254 145 45 75 chr13 51493169 51493236 -68791076 - L1MD LINE L1 -637 5605 5541 1 977 650 299 115 16 chr13 51493418 51493731 -68790581 - L1MD LINE L1 -860 5286 4943 1 977 673 242 50 128 chr13 51493731 51493973 -68790339 + ID_B1 SINE B4 2 224 0 1 977 363 352 68 34 chr13 51494070 51494276 -68790036 - L1MD LINE L1 -2517 3629 3417 1 977 193 180 59 20 chr13 51494348 51494399 -68789913 + L2 LINE L2 1458 1510 -1909 1 977 322 276 69 61 chr13 51494402 51494533 -68789779 - L1MD LINE L1 -2982 3164 3033 1 977 1059 252 161 70 chr13 51494979 51495321 -68788991 - MTEa LTR MaLR -6 373 1 1 977 477 0 0 0 chr13 51495561 51495614 -68788698 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 977 270 0 0 0 chr13 51495614 51495643 -68788669 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 977 188 32 97 0 chr13 51496465 51496496 -68787816 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 1 977 315 266 39 31 chr13 51497026 51497171 -68787141 + L1M2 LINE L1 5333 5491 -698 1 977 699 257 49 40 chr13 51497171 51497418 -68786894 + B4A SINE B4 10 258 -34 1 977 325 295 111 35 chr13 51497479 51497623 -68786689 + HAL1-3A_ME LINE L1 2285 2439 -419 1 977 199 169 0 63 chr13 51497623 51497686 -68786626 + GA-rich Low_complexity Low_complexity 1 59 0 1 977 249 108 0 0 chr13 51497746 51497783 -68786529 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 1 977 1218 48 0 0 chr13 51497783 51497930 -68786382 - B1_Mm SINE Alu 0 147 1 1 977 261 0 0 0 chr13 51498060 51498089 -68786223 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 977 1024 265 93 152 chr13 51498106 51498711 -68785601 - Lx8 LINE L1 -733 6740 6172 1 977 738 314 20 20 chr13 51498873 51499120 -68785192 + Lx8 LINE L1 6776 7022 -451 1 977 982 269 112 38 chr13 51499139 51499479 -68784833 + Lx8 LINE L1 7075 7439 -34 1 977 225 240 89 50 chr13 51499407 51499508 -68784804 + RMER1C Other Other 1223 1327 -15 1 977 315 0 0 0 chr13 51499608 51499643 -68784669 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 977 1706 173 46 13 chr13 51499696 51500000 -68784312 + ORR1C2 LTR MaLR 3 316 -68 1 977 326 197 82 0 chr13 51500001 51500062 -68784250 + ORR1C2 LTR MaLR 318 383 -1 1 977 344 291 52 0 chr13 51500068 51500202 -68784110 + L1M2 LINE L1 5515 5655 -645 2 977 640 292 13 0 chr13 51500268 51500422 -68783890 - ID_B1 SINE B4 -67 157 2 3 977 205 160 27 45 chr13 51500743 51500854 -68783458 + (CA)n Simple_repeat Simple_repeat 1 109 0 4 977 291 200 35 52 chr13 51500889 51501005 -68783307 + (CA)n Simple_repeat Simple_repeat 2 115 0 4 977 375 78 0 0 chr13 51501043 51501094 -68783218 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 977 352 323 105 39 chr13 51501767 51501996 -68782316 - MLT2B4 LTR ERVL -251 305 62 5 977 576 0 0 0 chr13 51505279 51505343 -68778969 + (TGG)n Simple_repeat Simple_repeat 2 65 0 6 977 552 143 0 0 chr13 51505619 51505717 -68778595 + (CA)n Simple_repeat Simple_repeat 2 99 0 7 977 236 47 0 85 chr13 51507169 51507216 -68777096 + (A)n Simple_repeat Simple_repeat 1 43 0 8 977 191 167 0 23 chr13 51507381 51507424 -68776888 + GA-rich Low_complexity Low_complexity 4 45 0 9 977 222 37 0 0 chr13 51508137 51508164 -68776148 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 977 223 304 14 0 chr13 51508180 51508249 -68776063 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 977 520 289 84 77 chr13 51508278 51508552 -68775760 - B4A SINE B4 -15 277 2 1 977 688 186 6 77 chr13 51509748 51509917 -68774395 - URR1A DNA MER1_type 0 226 70 1 977 1332 230 0 93 chr13 51510101 51510422 -68773890 + B4 SINE B4 2 292 0 1 977 1182 224 97 77 chr13 51510752 51510905 -68773407 + MTE2b LTR MaLR 10 177 -202 1 977 1013 145 37 11 chr13 51510905 51511093 -68773219 + B2_Mm2 SINE B2 1 193 -2 1 977 1182 224 97 77 chr13 51511093 51511278 -68773034 + MTE2b LTR MaLR 178 355 -24 1 978 649 271 76 86 chr13 51511503 51511701 -68772611 + ID_B1 SINE B4 11 206 -18 1 978 297 0 0 0 chr13 51511702 51511735 -68772577 + (ATG)n Simple_repeat Simple_repeat 1 33 0 1 978 237 33 0 0 chr13 51511735 51511765 -68772547 + (GGA)n Simple_repeat Simple_repeat 1 30 0 1 978 843 244 22 52 chr13 51512623 51512917 -68771395 + B4A SINE B4 2 292 0 1 978 323 294 0 6 chr13 51512917 51513098 -68771214 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 978 304 103 0 33 chr13 51513577 51513637 -68770675 + (TTCC)n Simple_repeat Simple_repeat 2 59 0 2 978 225 0 0 0 chr13 51515646 51515671 -68768641 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 978 273 57 0 0 chr13 51517736 51517771 -68766541 + (TGG)n Simple_repeat Simple_repeat 1 35 0 2 978 591 293 53 84 chr13 51517807 51517880 -68766432 - B4A SINE B4 -10 282 222 2 978 271 0 51 0 chr13 51517880 51517919 -68766393 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 978 591 293 53 84 chr13 51517919 51518072 -68766240 - B4A SINE B4 -71 221 63 2 978 605 236 43 25 chr13 51518564 51518725 -68765587 + RSINE1 SINE B4 1 164 -1 2 978 210 37 0 0 chr13 51518983 51519010 -68765302 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 978 354 245 147 0 chr13 51520635 51520737 -68763575 - PB1D10 SINE Alu 0 117 1 2 978 272 380 42 0 chr13 51521379 51521521 -68762791 + MER5A DNA MER1_type 23 170 -19 2 978 255 288 0 0 chr13 51521788 51521847 -68762465 + LTR16E1 LTR ERVL 438 496 -42 3 978 189 0 0 0 chr13 51523970 51523991 -68760321 + (T)n Simple_repeat Simple_repeat 1 21 0 3 978 1021 226 58 5 chr13 51524603 51524808 -68759504 - B3 SINE B2 0 216 1 3 978 192 40 0 0 chr13 51524821 51524846 -68759466 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 978 806 90 213 0 chr13 51524883 51525005 -68759307 + B1_Mus1 SINE Alu 1 148 0 3 978 198 103 0 0 chr13 51525007 51525036 -68759276 + (A)n Simple_repeat Simple_repeat 1 29 0 3 978 495 0 0 0 chr13 51525724 51525779 -68758533 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 978 516 294 180 29 chr13 51526963 51527152 -68757160 + L1MC LINE L1 4125 4329 -1817 3 978 485 269 143 23 chr13 51527152 51527285 -68757027 + RSINE1 SINE B4 4 152 -13 3 978 345 24 0 0 chr13 51527289 51527331 -68756981 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 978 516 294 180 29 chr13 51527331 51527962 -68756350 + L1MC LINE L1 4330 5069 -1077 3 978 945 90 0 0 chr13 51528244 51528377 -68755935 + (GGGA)n Simple_repeat Simple_repeat 3 135 0 4 978 305 328 16 16 chr13 51528464 51528591 -68755721 - MER2 DNA MER2_type -28 317 191 4 978 244 121 0 49 chr13 51528710 51528771 -68755541 + (CACCC)n Simple_repeat Simple_repeat 4 61 0 4 978 302 333 16 33 chr13 51529111 51529232 -68755080 - HAL1-3A_ME LINE L1 -455 2403 2285 4 978 270 159 29 14 chr13 51529234 51529304 -68755008 + CT-rich Low_complexity Low_complexity 3 73 0 4 978 797 191 22 9 chr13 51531161 51531485 -68752827 + CT-rich Low_complexity Low_complexity 1 328 0 4 978 396 59 0 0 chr13 51531781 51531832 -68752480 + (GA)n Simple_repeat Simple_repeat 1 51 0 4 978 780 239 25 68 chr13 51533099 51533361 -68750951 + MTE2a LTR MaLR 7 261 -158 4 978 1403 252 116 89 chr13 51533737 51534319 -68749993 + RLTR18 LTR ERVK 1 614 -2 4 978 5394 147 50 31 chr13 51534414 51535547 -68748765 + L1_Mur3 LINE L1 1592 2746 -3134 4 978 853 211 5 93 chr13 51536074 51536267 -68748045 - B3A SINE B2 -18 180 5 5 978 447 106 0 0 chr13 51536448 51536514 -68747798 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 978 591 65 32 0 chr13 51536514 51536607 -68747705 + (GA)n Simple_repeat Simple_repeat 2 97 0 5 978 308 287 118 114 chr13 51536607 51536729 -68747583 - B4 SINE B4 -28 264 127 5 978 2292 136 114 3 chr13 51536729 51537106 -68747206 + MTC LTR MaLR 1 419 -2 5 978 308 287 118 114 chr13 51537106 51537203 -68747109 - B4 SINE B4 -166 126 44 5 978 712 264 77 36 chr13 51537211 51537463 -68746849 + ORR1D2 LTR MaLR 1 255 -119 5 978 288 0 0 0 chr13 51537463 51537495 -68746817 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 978 189 0 0 0 chr13 51537494 51537515 -68746797 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 978 248 198 91 0 chr13 51537520 51537590 -68746722 + ORR1D2 LTR MaLR 262 348 -31 5 978 604 273 3 51 chr13 51537631 51537827 -68746485 - B3A SINE B2 -14 181 5 5 978 315 224 0 0 chr13 51539388 51539464 -68744848 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 5 978 885 292 102 4 chr13 51539464 51539729 -68744583 - B4A SINE B4 0 292 2 6 978 551 287 20 13 chr13 51539877 51540029 -68744283 + HAL1-2a_MD LINE L1 2350 2502 -522 6 978 433 289 34 27 chr13 51540359 51540505 -68743807 + B1F1 SINE Alu 2 148 -1 6 978 225 0 0 0 chr13 51540598 51540623 -68743689 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 6 978 378 0 0 0 chr13 51540625 51540667 -68743645 + (TCCCC)n Simple_repeat Simple_repeat 1 42 0 6 978 775 192 0 11 chr13 51540669 51540843 -68743469 + CT-rich Low_complexity Low_complexity 4 175 0 6 978 232 108 0 26 chr13 51540876 51540914 -68743398 - Charlie10 DNA MER1_type -758 2064 2028 6 978 214 310 43 65 chr13 51541087 51541180 -68743132 + MIRc SINE MIR 84 174 -94 6 978 469 204 1 3 chr13 51541290 51541381 -68742931 + B4 SINE B4 1 90 -202 6 978 728 245 18 32 chr13 51541388 51541607 -68742705 + B3 SINE B2 1 216 0 6 978 243 0 0 0 chr13 51541619 51541646 -68742666 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 978 693 255 12 12 chr13 51541649 51541816 -68742496 + B4 SINE B4 79 245 -47 6 978 180 125 0 0 chr13 51541817 51541849 -68742463 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 978 378 61 0 0 chr13 51541899 51541948 -68742364 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 978 215 344 0 20 chr13 51542275 51542373 -68741939 + GA-rich Low_complexity Low_complexity 1 96 0 7 978 397 50 16 16 chr13 51542383 51542444 -68741868 + (GGGA)n Simple_repeat Simple_repeat 2 62 0 7 978 1921 184 54 23 chr13 51542527 51542955 -68741357 - BGLII_B LTR ERVK 0 441 1 7 978 194 33 0 62 chr13 51543600 51543616 -68740696 + (GAAA)n Simple_repeat Simple_repeat 1 16 0 7 978 1028 111 0 22 chr13 51543616 51543800 -68740512 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 978 194 33 0 62 chr13 51543800 51543815 -68740497 + (GAAA)n Simple_repeat Simple_repeat 1 14 0 7 978 369 58 0 0 chr13 51543830 51543882 -68740430 + (ATTG)n Simple_repeat Simple_repeat 2 53 0 7 978 520 281 0 0 chr13 51544272 51544386 -68739926 + PB1D7 SINE Alu 1 114 -6 8 978 5493 50 32 10 chr13 51545060 51545768 -68738544 - L1_Mus3 LINE L1 0 6638 5915 8 978 249 282 0 60 chr13 51545802 51545885 -68738427 + BC1_Mm scRNA scRNA 19 96 -56 8 978 399 287 84 79 chr13 51545967 51546194 -68738118 + MTD LTR MaLR 3 230 -189 8 978 628 245 15 85 chr13 51546288 51546489 -68737823 + MTE2a LTR MaLR 169 355 -24 8 978 256 303 87 48 chr13 51547089 51547193 -68737119 + ORR1E LTR MaLR 4 111 -248 8 978 3661 207 94 86 chr13 51547231 51548187 -68736125 + RLTR19-int LTR ERVK 2477 3504 -2633 8 978 1418 73 0 6 chr13 51548187 51548367 -68735945 + B2_Mm2 SINE B2 1 179 -16 8 978 615 27 0 0 chr13 51548376 51548449 -68735863 + (GA)n Simple_repeat Simple_repeat 2 74 0 8 978 3661 197 45 84 chr13 51548449 51548705 -68735607 + RLTR19-int LTR ERVK 3505 3676 -2461 8 978 512 202 0 9 chr13 51548705 51548810 -68735502 - LSU-rRNA_Hsa rRNA rRNA -730 4305 4202 8 978 1358 233 75 115 chr13 51548906 51549607 -68734705 + RLTR19-int LTR ERVK 2612 3969 -2168 8 978 431 136 38 19 chr13 51549711 51549816 -68734496 + CT-rich Low_complexity Low_complexity 3 109 0 9 978 679 314 44 0 chr13 51550227 51550431 -68733881 - ID_B1 SINE B4 -10 214 2 9 978 365 200 55 62 chr13 51550752 51550880 -68733432 + L1M4 LINE L1 14 140 -6402 9 978 603 283 72 45 chr13 51550895 51551117 -68733195 + B4A SINE B4 26 253 -39 9 978 231 36 0 0 chr13 51551139 51551167 -68733145 + (CA)n Simple_repeat Simple_repeat 1 28 0 9 978 540 56 0 0 chr13 51551167 51551239 -68733073 + (GA)n Simple_repeat Simple_repeat 1 72 0 9 978 885 275 117 26 chr13 51551259 51551602 -68732710 + MTE2b LTR MaLR 4 377 -2 9 978 333 299 101 28 chr13 51551662 51551879 -68732433 + L1M4 LINE L1 172 404 -6138 9 978 552 241 0 21 chr13 51551884 51552028 -68732284 - L1MA5 LINE L1 -1 6299 6159 9 978 428 217 183 0 chr13 51552037 51552152 -68732160 + L1M4 LINE L1 395 530 -6012 9 978 191 239 0 15 chr13 51552442 51552510 -68731802 + (CATATA)n Simple_repeat Simple_repeat 4 70 0 9 978 329 295 0 39 chr13 51552513 51552640 -68731672 + (CATA)n Simple_repeat Simple_repeat 2 123 0 9 978 570 273 132 61 chr13 51552641 51553261 -68731051 + L1M4 LINE L1 781 1444 -5098 9 978 249 303 39 13 chr13 51553305 51553382 -68730930 + MTE2b LTR MaLR 20 98 -281 1 978 1192 253 35 21 chr13 51553382 51553668 -68730644 + MTE2b LTR MaLR 58 347 -32 1 978 1182 202 86 118 chr13 51553668 51554074 -68730238 + MT2A LTR ERVL 1 522 -79 1 978 309 339 47 8 chr13 51554159 51554287 -68730025 + L1M5 LINE L1 5619 5751 -411 1 978 552 294 154 69 chr13 51554288 51554322 -68729990 - MTD LTR MaLR -62 345 317 1 978 1235 120 33 0 chr13 51554322 51554506 -68729806 + B2_Mm1a SINE B2 3 192 -1 1 978 788 274 91 17 chr13 51554506 51554789 -68729523 - MTD LTR MaLR -91 316 1 1 978 1026 272 79 8 chr13 51555275 51555465 -68728847 - B4 SINE B4 -2 290 82 1 978 216 0 0 0 chr13 51555465 51555489 -68728823 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 978 1026 272 79 8 chr13 51555489 51555565 -68728747 - B4 SINE B4 -211 81 6 1 978 2893 41 0 131 chr13 51555699 51556119 -68728193 - RLTR10B2 LTR ERVK 0 365 1 1 978 304 270 71 18 chr13 51556157 51556270 -68728042 - MIRb SINE MIR -69 199 81 1 978 851 264 19 14 chr13 51557064 51557279 -68727033 - B3 SINE B2 0 216 1 1 978 430 179 126 0 chr13 51557581 51557676 -68726636 - MTE2a LTR MaLR -30 349 243 1 978 348 273 34 0 chr13 51557686 51557774 -68726538 + L1MA5A LINE L1 6201 6291 -6 1 978 346 250 164 0 chr13 51557790 51557888 -68726424 + B4 SINE B4 24 138 -154 1 978 1476 187 14 43 chr13 51557888 51558240 -68726072 + RLTR15 LTR ERVK 1 342 -17 1 978 430 264 24 32 chr13 51558248 51558373 -68725939 + B4A SINE B4 130 253 -39 1 978 324 0 0 0 chr13 51558386 51558422 -68725890 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 978 186 103 0 0 chr13 51559007 51559036 -68725276 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 978 929 262 85 15 chr13 51559049 51559320 -68724992 - B4 SINE B4 -2 290 1 1 978 749 331 92 40 chr13 51559640 51560062 -68724250 + MLT1C LTR MaLR 1 444 -23 1 978 180 0 0 0 chr13 51560272 51560292 -68724020 + (T)n Simple_repeat Simple_repeat 1 20 0 1 978 1143 245 28 50 chr13 51560312 51560381 -68723931 + B4 SINE B4 16 83 -209 1 978 278 26 0 25 chr13 51560381 51560421 -68723891 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 978 1143 245 28 50 chr13 51560421 51560634 -68723678 + B4 SINE B4 84 292 0 1 978 201 39 0 0 chr13 51560644 51560670 -68723642 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 978 1554 246 30 16 chr13 51561060 51561428 -68722884 - MTEa LTR MaLR -6 373 1 1 978 513 0 0 0 chr13 51562450 51562507 -68721805 + (TTTA)n Simple_repeat Simple_repeat 4 60 0 1 978 1246 76 0 0 chr13 51562507 51562664 -68721648 - B2_Mm2 SINE B2 -38 157 1 1 978 509 311 16 14 chr13 51562907 51563115 -68721197 + L1MA7 LINE L1 5696 5906 -385 1 978 396 0 0 0 chr13 51563487 51563531 -68720781 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 978 877 224 30 0 chr13 51563549 51563714 -68720598 - B3A SINE B2 -28 170 1 1 978 630 312 67 24 chr13 51563945 51564198 -68720114 - MTE2a LTR MaLR -15 364 101 1 978 243 0 0 0 chr13 51564249 51564276 -68720036 + (A)n Simple_repeat Simple_repeat 1 27 0 1 978 197 333 50 58 chr13 51565204 51565325 -68718987 + L4 LINE RTE 486 605 -1424 1 978 346 279 226 42 chr13 51565769 51566008 -68718304 - B4 SINE B4 -8 284 2 1 978 408 275 44 35 chr13 51566200 51566313 -68717999 - PB1D10 SINE Alu 0 117 4 1 978 207 0 0 0 chr13 51566406 51566429 -68717883 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1 978 280 204 91 64 chr13 51566432 51566542 -68717770 - PB1D9 SINE Alu -7 113 1 1 978 514 309 13 20 chr13 51566971 51567123 -68717189 + MTD LTR MaLR 1 151 -268 1 978 309 162 14 81 chr13 51567282 51567356 -68716956 + RLTR25B LTR ERVK 430 498 -530 1 978 798 67 9 0 chr13 51567299 51567404 -68716908 + B1_Mus2 SINE Alu 42 147 0 1 978 480 211 2 4 chr13 51568603 51568697 -68715615 + B4 SINE B4 2 95 -70 1 978 15231 66 8 0 chr13 51568698 51571329 -68712983 + L1_Mus1 LINE L1 3914 6566 -1 1 978 279 291 171 23 chr13 51571348 51571436 -68712876 + B4 SINE B4 49 149 -143 1 978 210 338 15 0 chr13 51571519 51571587 -68712725 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 978 3396 50 2 0 chr13 51571587 51571986 -68712326 + MTB LTR MaLR 1 400 0 1 978 351 0 0 0 chr13 51571995 51572034 -68712278 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 978 21 0 0 0 chr13 51572527 51572548 -68711764 + AT_rich Low_complexity Low_complexity 1 21 0 1 978 518 273 20 27 chr13 51572759 51572906 -68711406 - ID_B1 SINE B4 -10 214 69 1 978 1065 247 42 18 chr13 51572969 51573253 -68711059 + B4 SINE B4 2 292 0 1 978 399 157 27 51 chr13 51573253 51573550 -68710762 + (CA)n Simple_repeat Simple_repeat 1 289 0 1 978 236 191 21 0 chr13 51573586 51573633 -68710679 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 978 584 116 11 0 chr13 51574454 51574549 -68709763 + (TAGG)n Simple_repeat Simple_repeat 3 98 0 1 978 953 62 22 38 chr13 51574585 51574768 -68709544 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 978 1116 40 11 38 chr13 51574809 51574992 -68709320 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 1 978 338 114 0 14 chr13 51576986 51577045 -68707267 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 978 348 43 0 0 chr13 51577045 51577091 -68707221 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 978 338 114 0 14 chr13 51577091 51577102 -68707210 + (GA)n Simple_repeat Simple_repeat 1 11 0 1 978 948 272 67 4 chr13 51577114 51577383 -68706929 - B4A SINE B4 -6 286 1 1 978 517 314 113 31 chr13 51577573 51577941 -68706371 + MER63B DNA AcHobo 27 435 -1 1 978 1014 209 52 9 chr13 51578808 51579020 -68705292 + ID_B1 SINE B4 4 224 0 1 978 8471 25 3 3 chr13 51579508 51580482 -68703830 + L1Md_A LINE L1 5609 6582 0 1 978 535 259 100 93 chr13 51581073 51581362 -68702950 - B4A SINE B4 0 292 2 1 978 858 215 24 68 chr13 51581436 51581641 -68702671 - B3A SINE B2 0 198 3 1 978 657 266 7 0 chr13 51581745 51581884 -68702428 - B4 SINE B4 -72 220 81 1 978 507 17 0 0 chr13 51582502 51582562 -68701750 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 978 591 154 0 0 chr13 51583329 51583465 -68700847 + CT-rich Low_complexity Low_complexity 2 137 0 1 978 198 103 0 0 chr13 51583465 51583494 -68700818 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 978 966 230 29 140 chr13 51584731 51585045 -68699267 - MTE2a LTR MaLR -99 280 2 1 978 878 296 105 20 chr13 51585263 51585559 -68698753 - ORR1E LTR MaLR -2 357 37 1 978 598 259 32 75 chr13 51585753 51585941 -68698371 + B3A SINE B2 3 182 -16 1 978 221 225 0 0 chr13 51585945 51585985 -68698327 + (CACG)n Simple_repeat Simple_repeat 3 42 0 1 978 1471 241 98 28 chr13 51586595 51586984 -68697328 - MTD LTR MaLR -1 418 3 1 978 695 206 157 71 chr13 51588243 51588415 -68695897 + ID_B1 SINE B4 8 197 -27 1 978 3601 20 0 0 chr13 51588415 51588811 -68695501 - MTA_Mm LTR MaLR 0 396 1 1 978 695 206 157 71 chr13 51588811 51588836 -68695476 + ID_B1 SINE B4 198 222 -2 1 978 869 291 30 47 chr13 51589262 51589485 -68694827 + B4A SINE B4 2 230 -62 1 978 737 247 0 0 chr13 51589485 51589631 -68694681 + B1_Mur1 SINE Alu 2 147 -2 1 978 869 291 30 47 chr13 51589631 51589703 -68694609 + B4A SINE B4 231 292 0 1 978 207 0 0 0 chr13 51589727 51589750 -68694562 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1 978 348 24 0 0 chr13 51590034 51590075 -68694237 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 978 375 316 95 44 chr13 51591117 51591569 -68692743 + L1MB3 LINE L1 5432 5910 -261 1 978 350 278 77 44 chr13 51591577 51591758 -68692554 - B3A SINE B2 -11 187 1 1 978 271 325 8 48 chr13 51591854 51591980 -68692332 + MER20 DNA MER1_type 54 174 -45 1 978 299 278 439 0 chr13 51592318 51592473 -68691839 - ID_B1 SINE B4 0 224 2 1 978 586 153 0 47 chr13 51592573 51592744 -68691568 + (CA)n Simple_repeat Simple_repeat 2 164 0 1 978 334 169 11 46 chr13 51592746 51592833 -68691479 + (CATATA)n Simple_repeat Simple_repeat 4 87 0 1 978 505 127 27 54 chr13 51592833 51593017 -68691295 + (CATA)n Simple_repeat Simple_repeat 1 179 0 1 978 180 0 0 0 chr13 51593033 51593053 -68691259 + (TC)n Simple_repeat Simple_repeat 1 20 0 1 978 225 0 0 0 chr13 51593053 51593077 -68691235 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 978 242 339 0 0 chr13 51593320 51593379 -68690933 + ID4_ SINE ID 1 59 -24 1 978 1002 269 84 29 chr13 51593897 51594246 -68690066 + MTE2a LTR MaLR 42 405 -14 1 978 573 205 85 16 chr13 51594455 51594584 -68689728 + RSINE1 SINE B4 8 145 -20 1 978 267 308 42 8 chr13 51594745 51594863 -68689449 - L1MC LINE L1 -1929 4217 4096 1 978 700 289 105 26 chr13 51594998 51595612 -68688700 - L1M5 LINE L1 -2227 3913 3253 1 978 320 0 25 0 chr13 51595731 51595771 -68688541 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 978 1140 74 0 7 chr13 51595771 51595910 -68688402 - B1_Mus1 SINE Alu -9 139 1 1 978 459 0 0 0 chr13 51595961 51596012 -68688300 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 978 347 336 96 0 chr13 51596013 51596117 -68688195 - RSINE1 SINE B4 -16 149 36 1 978 5813 76 27 0 chr13 51596790 51598109 -68686203 + L1VL2 LINE L1 466 1826 -1789 1 978 345 287 0 0 chr13 51598253 51598340 -68685972 - PB1D10 SINE Alu -2 115 29 1 978 22 0 0 0 chr13 51598379 51598401 -68685911 + AT_rich Low_complexity Low_complexity 1 22 0 1 978 182 37 0 36 chr13 51598960 51598988 -68685324 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 978 22 56 0 0 chr13 51599195 51599231 -68685081 + AT_rich Low_complexity Low_complexity 1 36 0 1 978 332 212 125 0 chr13 51599335 51599415 -68684897 + L1M2 LINE L1 2745 2834 -3309 1 978 461 309 112 82 chr13 51599483 51599751 -68684561 + B4A SINE B4 6 281 -11 1 978 1217 48 0 0 chr13 51599802 51599948 -68684364 + B1_Mus1 SINE Alu 3 148 0 1 978 285 98 0 0 chr13 51599978 51600019 -68684293 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 978 354 243 43 99 chr13 51600026 51600259 -68684053 - RMER12 LTR ERVK -334 988 769 2 978 215 116 47 0 chr13 51600259 51600302 -68684010 + (CATA)n Simple_repeat Simple_repeat 1 45 0 2 978 623 298 19 0 chr13 51600721 51600882 -68683430 + RSINE1 SINE B4 2 165 0 2 978 386 250 13 0 chr13 51601844 51601920 -68682392 - RSINE1 SINE B4 -5 160 84 2 978 963 0 0 0 chr13 51602425 51602532 -68681780 + (TCTCCC)n Simple_repeat Simple_repeat 3 109 0 2 978 364 305 9 19 chr13 51602785 51602892 -68681420 - MTEb LTR MaLR -18 361 256 2 978 1113 267 62 112 chr13 51606041 51606216 -68678096 - MTEa LTR MaLR -11 368 211 2 978 1360 82 49 0 chr13 51606216 51606400 -68677912 + B2_Mm2 SINE B2 2 194 -1 2 978 1113 267 62 112 chr13 51606400 51606608 -68677704 - MTEa LTR MaLR -169 210 4 2 978 407 262 61 102 chr13 51607833 51607991 -68676321 + RLTR20D LTR ERVK 144 312 -222 2 978 357 24 0 0 chr13 51608007 51608049 -68676263 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 978 231 337 33 33 chr13 51608050 51608142 -68676170 + RLTR20D LTR ERVK 460 551 0 2 978 246 105 0 0 chr13 51608245 51608283 -68676029 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2 978 1507 159 27 227 chr13 51609519 51609999 -68674313 + ORR1C2 LTR MaLR 1 384 0 2 978 271 219 0 45 chr13 51610925 51610992 -68673320 + L1MA4 LINE L1 5832 5895 -405 2 978 480 139 0 0 chr13 51610992 51611071 -68673241 + (TG)n Simple_repeat Simple_repeat 2 80 0 2 978 23 0 0 0 chr13 51611335 51611358 -68672954 + AT_rich Low_complexity Low_complexity 1 23 0 2 978 534 331 0 42 chr13 51612093 51612235 -68672077 + RSINE1 SINE B4 3 138 -27 2 978 2241 163 32 12 chr13 51612676 51613085 -68671227 - MTC LTR MaLR 0 421 5 2 978 258 309 113 63 chr13 51613363 51613522 -68670790 + MIRc SINE MIR 7 176 -92 2 978 1080 212 42 94 chr13 51613709 51613939 -68670373 + B4A SINE B4 2 220 -72 2 978 1153 120 32 32 chr13 51613939 51614128 -68670184 + B2_Mm2 SINE B2 1 189 -6 2 978 1080 212 42 94 chr13 51614128 51614204 -68670108 + B4A SINE B4 221 292 0 2 978 236 352 0 0 chr13 51614204 51614292 -68670020 + (CA)n Simple_repeat Simple_repeat 1 88 0 2 978 325 270 60 17 chr13 51614738 51614855 -68669457 + B1F SINE Alu 27 148 -1 2 978 426 247 0 0 chr13 51614862 51614943 -68669369 + ID4 SINE ID 1 81 -2 2 978 324 64 0 0 chr13 51614944 51614991 -68669321 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 2 978 1418 281 80 27 chr13 51615150 51615319 -68668993 + L1M2 LINE L1 4043 4219 -1924 2 978 207 0 0 0 chr13 51615319 51615342 -68668970 + (CA)n Simple_repeat Simple_repeat 1 23 0 2 978 1418 281 80 27 chr13 51615342 51615848 -68668464 + L1M2 LINE L1 4220 4753 -1390 2 978 2519 143 16 42 chr13 51615848 51616272 -68668040 + MTC LTR MaLR 1 413 -8 2 978 712 271 134 28 chr13 51616286 51616906 -68667406 + L1M2 LINE L1 4786 5484 -687 2 978 1809 181 110 11 chr13 51616917 51617291 -68667021 + MTD LTR MaLR 1 411 -8 2 978 376 272 87 0 chr13 51617297 51617389 -68666923 + B3A SINE B2 4 103 -95 2 978 732 278 56 18 chr13 51617427 51617713 -68666599 + L1MA6 LINE L1 5389 5685 -615 2 978 785 107 0 8 chr13 51617801 51617924 -68666388 + (TA)n Simple_repeat Simple_repeat 1 122 0 2 978 643 299 47 8 chr13 51617924 51618180 -68666132 + L1MA6 LINE L1 5809 6074 -226 2 978 453 219 114 0 chr13 51618237 51618342 -68665970 + ID_B1 SINE B4 93 209 -15 2 978 889 208 48 44 chr13 51618345 51618551 -68665761 + ID_B1 SINE B4 18 224 0 2 978 515 342 43 11 chr13 51619213 51619399 -68664913 + B4 SINE B4 8 199 -93 2 978 497 234 26 26 chr13 51619313 51619427 -68664885 + B1F SINE Alu 24 137 -12 2 978 1132 251 83 10 chr13 51619682 51619984 -68664328 - MTE2b LTR MaLR 0 379 56 2 978 492 18 0 0 chr13 51620108 51620165 -68664147 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 978 808 234 114 45 chr13 51620184 51620430 -68663882 - B4 SINE B4 -25 267 5 2 978 608 248 58 102 chr13 51620666 51620795 -68663517 + B3 SINE B2 2 129 -87 2 978 3437 40 8 0 chr13 51620795 51621192 -68663120 - MTB LTR MaLR 0 400 1 2 978 608 248 58 102 chr13 51621192 51621244 -68663068 + B3 SINE B2 130 177 -39 2 978 258 95 0 0 chr13 51621244 51621286 -68663026 + (CAGA)n Simple_repeat Simple_repeat 1 42 0 2 978 608 248 58 102 chr13 51621286 51621328 -68662984 + B3 SINE B2 178 216 0 2 978 596 225 32 38 chr13 51621351 51621536 -68662776 + B3A SINE B2 1 184 -14 2 978 311 316 0 0 chr13 51622571 51622669 -68661643 + GA-rich Low_complexity Low_complexity 2 99 0 2 978 201 196 59 0 chr13 51622888 51622939 -68661373 + (TATATG)n Simple_repeat Simple_repeat 1 54 0 2 978 635 293 29 85 chr13 51622961 51623267 -68661045 - B4A SINE B4 -2 290 2 2 978 294 29 0 0 chr13 51623662 51623697 -68660615 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 978 471 107 0 0 chr13 51623697 51623771 -68660541 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 978 240 264 55 14 chr13 51623871 51623944 -68660368 - MER5A DNA MER1_type -5 184 109 2 978 12452 157 39 40 chr13 51624350 51627888 -68656424 + Lx6 LINE L1 3555 7102 -358 2 978 381 248 139 41 chr13 51627888 51628010 -68656302 - RMER10A LTR ERVL 0 398 265 2 978 576 40 0 0 chr13 51628011 51628086 -68656226 + (GA)n Simple_repeat Simple_repeat 2 76 0 2 978 1008 209 16 0 chr13 51628087 51628278 -68656034 - RMER10A LTR ERVL -248 194 1 2 978 840 236 51 0 chr13 51628281 51628459 -68655853 + Lx6 LINE L1 7101 7287 -173 2 978 1160 109 0 0 chr13 51628459 51628615 -68655697 + B2_Mm2 SINE B2 3 158 -37 2 978 719 249 35 0 chr13 51628615 51628784 -68655528 + Lx6 LINE L1 7275 7449 -11 2 978 210 178 157 167 chr13 51629400 51629508 -68654804 + PB1 SINE Alu 1 107 -20 2 978 522 129 43 11 chr13 51629518 51629612 -68654700 + Lx9 LINE L1 7386 7482 -162 2 978 364 309 106 22 chr13 51629665 51630029 -68654283 + L1M5 LINE L1 5440 5833 -340 2 978 570 213 6 13 chr13 51630477 51630634 -68653678 + (TA)n Simple_repeat Simple_repeat 2 157 0 2 978 550 291 151 39 chr13 51631903 51632135 -68652177 + B4A SINE B4 32 289 -3 2 978 372 22 0 0 chr13 51632139 51632184 -68652128 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 978 1035 246 37 11 chr13 51632550 51632821 -68651491 + B4 SINE B4 1 278 -14 2 978 528 93 0 0 chr13 51632844 51632919 -68651393 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 978 429 247 0 21 chr13 51633252 51633347 -68650965 + MTC LTR MaLR 1 93 -328 2 978 1306 80 23 6 chr13 51633350 51633527 -68650785 + B2_Mm2 SINE B2 2 181 -14 2 978 365 66 26 66 chr13 51633540 51633650 -68650662 + B2_Mm2 SINE B2 47 188 -7 2 978 2148 154 27 0 chr13 51633646 51633976 -68650336 + MTC LTR MaLR 83 421 0 2 978 331 293 146 28 chr13 51634406 51634550 -68649762 - B4A SINE B4 -80 212 52 2 978 756 267 15 5 chr13 51634614 51634817 -68649495 + B3 SINE B2 1 205 -11 2 978 2483 142 20 73 chr13 51634886 51635327 -68648985 + MTC LTR MaLR 1 418 -3 2 978 195 42 0 0 chr13 51636107 51636131 -68648181 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2 978 362 292 80 7 chr13 51636322 51636460 -68647852 + RMER20B LTR ERVK 180 327 -300 2 978 668 217 26 65 chr13 51637320 51637473 -68646839 + B3A SINE B2 2 148 -50 2 978 369 43 0 0 chr13 51637473 51637520 -68646792 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 978 1669 256 14 19 chr13 51637706 51638072 -68646240 - MTEa LTR MaLR -2 377 14 2 978 1466 218 55 63 chr13 51638269 51638636 -68645676 - ORR1D2 LTR MaLR -5 365 2 2 978 1023 254 23 141 chr13 51638636 51639004 -68645308 - MTE2a LTR MaLR -55 324 3 2 978 698 281 106 9 chr13 51639222 51639552 -68644760 - L1MC LINE L1 -945 5201 4840 2 978 321 47 0 0 chr13 51639627 51639670 -68644642 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 978 455 219 0 0 chr13 51639736 51639818 -68644494 - RSINE1 SINE B4 -81 84 3 2 978 1393 267 48 74 chr13 51639870 51640395 -68643917 - RMER19C LTR ERVK -238 664 145 2 978 1254 303 66 53 chr13 51640430 51640675 -68643637 - L1MC LINE L1 -1428 4718 4469 2 978 625 275 25 30 chr13 51640675 51640874 -68643438 - B3A SINE B2 0 198 1 2 978 1298 285 53 42 chr13 51640874 51641683 -68642629 - L1MC LINE L1 -1678 4468 3660 2 978 261 286 55 0 chr13 51641725 51641798 -68642514 + MTE2b LTR MaLR 103 179 -200 2 978 405 0 0 0 chr13 51641868 51641913 -68642399 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 122 489 241 9 9 chr13 51642275 51642384 -68641928 + PB1D10 SINE Alu 1 109 -8 2 979 291 207 17 0 chr13 51642460 51642518 -68641794 + RMER15 LTR ERVL 1 59 -516 2 979 862 246 67 92 chr13 51642534 51642937 -68641375 + RMER15 LTR ERVL 45 575 0 2 979 237 139 0 0 chr13 51642958 51643001 -68641311 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 979 2473 258 70 5 chr13 51643175 51643778 -68640534 + Lx6 LINE L1 6794 7435 -25 2 979 687 246 0 0 chr13 51643795 51643974 -68640338 + (TA)n Simple_repeat Simple_repeat 2 180 0 2 979 486 75 0 0 chr13 51643963 51644030 -68640282 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 979 906 251 62 45 chr13 51644698 51644990 -68639322 + ORR1E LTR MaLR 63 359 0 2 979 252 0 0 0 chr13 51645243 51645271 -68639041 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2 979 528 16 0 0 chr13 51646080 51646141 -68638171 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 979 339 25 0 0 chr13 51646141 51646180 -68638132 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 979 641 294 65 40 chr13 51646205 51646481 -68637831 - B4A SINE B4 -8 284 2 2 979 409 293 35 112 chr13 51646557 51646726 -68637586 - B3A SINE B2 -16 182 27 2 979 304 164 56 56 chr13 51647100 51647171 -68637141 + MLT1A1 LTR MaLR 308 378 -30 2 979 311 303 25 26 chr13 51647231 51647368 -68636944 - MLT1A0 LTR MaLR -15 375 237 2 979 548 272 79 12 chr13 51647384 51647548 -68636764 - MLT1A0 LTR MaLR -190 175 1 2 979 906 223 146 8 chr13 51648480 51648720 -68635592 + B4A SINE B4 7 279 -13 2 979 1303 266 11 72 chr13 51649055 51649428 -68634884 - MT2A LTR ERVL -178 355 6 2 979 272 277 95 35 chr13 51649488 51649597 -68634715 - B4 SINE B4 -54 238 123 2 979 1909 146 10 16 chr13 51649597 51649953 -68634359 + ORR1A4 LTR MaLR 2 338 -8 2 979 524 292 0 8 chr13 51649961 51650092 -68634220 - B4A SINE B4 -162 130 1 2 979 217 333 40 0 chr13 51650237 51650336 -68633976 - MIRm SINE MIR -8 268 166 2 979 200 267 0 0 chr13 51650474 51650519 -68633793 + GA-rich Low_complexity Low_complexity 2 46 0 2 979 1880 237 119 41 chr13 51650930 51650967 -68633345 + Lx8 LINE L1 6667 6698 -775 3 979 1879 194 194 11 chr13 51650967 51651368 -68632944 + MT2A LTR ERVL 1 485 -48 3 979 276 100 0 0 chr13 51651368 51651408 -68632904 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 979 1879 194 194 11 chr13 51651408 51651455 -68632857 + MT2A LTR ERVL 486 531 -2 3 979 1880 237 119 41 chr13 51651455 51652003 -68632309 + Lx8 LINE L1 6699 7298 -175 3 979 192 77 0 0 chr13 51652451 51652477 -68631835 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 979 1175 226 33 87 chr13 51652506 51652806 -68631506 - B4 SINE B4 0 292 9 3 979 845 311 55 7 chr13 51653105 51653380 -68630932 + B4A SINE B4 5 292 0 3 979 238 274 81 35 chr13 51653405 51653492 -68630820 - ORR1D2 LTR MaLR -1 369 279 3 979 771 278 35 53 chr13 51653962 51654190 -68630122 + B4A SINE B4 68 291 -1 3 979 785 182 3 6 chr13 51654194 51654537 -68629775 + (CA)n Simple_repeat Simple_repeat 1 342 0 3 979 339 65 0 0 chr13 51655547 51655593 -68628719 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 979 180 97 0 0 chr13 51655704 51655735 -68628577 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 979 413 36 18 0 chr13 51656726 51656781 -68627531 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 979 235 162 34 51 chr13 51656843 51656960 -68627352 + (TATATG)n Simple_repeat Simple_repeat 2 116 0 3 979 224 234 26 53 chr13 51657044 51657235 -68627077 + (TATATG)n Simple_repeat Simple_repeat 1 185 0 3 979 246 220 0 0 chr13 51657344 51657403 -68626909 + (CGTG)n Simple_repeat Simple_repeat 1 59 0 3 979 255 200 83 0 chr13 51658086 51658146 -68626166 + ID4 SINE ID 5 69 -14 3 979 3609 18 0 0 chr13 51658873 51659269 -68625043 - MTA_Mm LTR MaLR 0 396 1 3 979 793 244 18 55 chr13 51659368 51659585 -68624727 + ID_B1 SINE B4 3 211 -13 3 979 24 77 0 0 chr13 51662456 51662508 -68621804 + GC_rich Low_complexity Low_complexity 1 52 0 3 979 231 114 0 0 chr13 51664713 51664748 -68619564 + (A)n Simple_repeat Simple_repeat 1 35 0 3 979 198 103 0 0 chr13 51664979 51665008 -68619304 + (A)n Simple_repeat Simple_repeat 1 29 0 3 979 473 301 88 56 chr13 51665933 51666148 -68618164 + B4 SINE B4 7 228 -64 3 979 422 299 0 45 chr13 51666942 51667054 -68617258 + PB1D10 SINE Alu 11 117 0 3 979 563 254 195 19 chr13 51667387 51667592 -68616720 + B4A SINE B4 1 241 -51 3 979 704 247 34 34 chr13 51667578 51667754 -68616558 + B3 SINE B2 16 191 -25 3 979 216 270 16 0 chr13 51667797 51667860 -68616452 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 979 649 237 36 97 chr13 51668145 51668341 -68615971 - RMER15 LTR ERVL -92 483 300 3 979 1055 8 8 0 chr13 51668522 51668646 -68615666 + (TAGA)n Simple_repeat Simple_repeat 4 128 0 3 979 239 275 43 11 chr13 51668855 51668947 -68615365 - ALINE LINE RTE -289 328 234 3 979 396 0 0 0 chr13 51669109 51669153 -68615159 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 979 413 162 186 18 chr13 51670062 51670175 -68614137 - URR1B DNA MER1_type -11 214 83 3 979 501 97 0 0 chr13 51670836 51670908 -68613404 + (CATA)n Simple_repeat Simple_repeat 1 72 0 3 979 1858 304 129 32 chr13 51671096 51672221 -68612091 - L1_Rod LINE L1 0 5847 4614 3 979 741 233 118 32 chr13 51672232 51672347 -68611965 - L1M2 LINE L1 -2080 4060 3934 3 979 423 0 0 0 chr13 51672347 51672394 -68611918 + (TTATA)n Simple_repeat Simple_repeat 2 48 0 3 979 2050 144 3 58 chr13 51672395 51672742 -68611570 + ORR1A4 LTR MaLR 2 329 0 3 979 741 233 118 32 chr13 51672742 51672903 -68611409 - L1M2 LINE L1 -2207 3933 3758 3 979 486 0 0 0 chr13 51672912 51672966 -68611346 + (TC)n Simple_repeat Simple_repeat 2 55 0 3 979 753 286 45 6 chr13 51672983 51673159 -68611153 - B3A SINE B2 -15 183 1 3 979 341 202 43 33 chr13 51673162 51673254 -68611058 - L1_Mur3 LINE L1 -2141 3739 3647 3 979 657 262 0 20 chr13 51673307 51673455 -68610857 - RSINE1 SINE B4 -19 146 2 3 979 871 300 101 14 chr13 51673462 51673976 -68610336 - L1M2 LINE L1 -2459 3684 3126 3 979 2474 248 88 55 chr13 51673976 51674852 -68609460 - ORR1D-int LTR MaLR -441 929 14 3 979 1067 232 61 97 chr13 51675135 51675559 -68608753 + MTE2a LTR MaLR 1 405 -14 3 979 296 113 38 0 chr13 51675784 51675837 -68608475 + CT-rich Low_complexity Low_complexity 6 60 0 3 979 390 289 29 72 chr13 51676938 51677076 -68607236 + B4A SINE B4 25 156 -136 3 979 4411 176 55 16 chr13 51677999 51678959 -68605353 + RMER19B LTR ERVK 3 885 -17 3 979 1186 75 0 0 chr13 51678959 51679106 -68605206 + B1_Mm SINE Alu 1 147 0 3 979 1107 37 7 0 chr13 51679383 51679519 -68604793 + B1_Mus2 SINE Alu 11 147 0 3 979 484 232 13 0 chr13 51679532 51679634 -68604678 - PB1D10 SINE Alu -41 106 3 3 979 288 274 53 70 chr13 51679634 51679665 -68604647 - MT2B2 LTR ERVL -423 161 133 3 979 504 105 0 40 chr13 51679712 51679811 -68604501 + L1Md_F2 LINE L1 6488 6582 0 3 979 401 162 18 18 chr13 51680042 51680155 -68604157 + (CATA)n Simple_repeat Simple_repeat 2 114 0 3 979 267 222 21 90 chr13 51680190 51680424 -68603888 + (CATATA)n Simple_repeat Simple_repeat 1 217 0 3 979 6060 122 89 45 chr13 51680424 51681384 -68602928 + RLTR13D3 LTR ERVK 1 1007 -107 3 979 336 24 0 0 chr13 51681384 51681425 -68602887 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 3 979 6060 122 89 45 chr13 51681425 51681531 -68602781 + RLTR13D3 LTR ERVK 1008 1114 0 3 979 274 170 16 78 chr13 51681531 51681740 -68602572 + (CATA)n Simple_repeat Simple_repeat 1 196 0 3 979 1580 52 21 0 chr13 51681915 51682106 -68602206 + B2_Mm2 SINE B2 1 195 0 3 979 2723 140 49 20 chr13 51682685 51683154 -68601158 + RLTR20C LTR ERVK 1 536 -42 3 979 276 30 0 0 chr13 51683154 51683187 -68601125 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 979 439 218 9 38 chr13 51683187 51683292 -68601020 + RLTR20C LTR ERVK 433 534 0 3 979 251 284 58 33 chr13 51683494 51683614 -68600698 + L1MDb LINE L1 149 271 -6362 3 979 618 82 0 0 chr13 51683616 51683701 -68600611 + (GGGA)n Simple_repeat Simple_repeat 4 88 0 3 979 960 115 154 0 chr13 51683850 51684006 -68600306 + B2_Mm2 SINE B2 2 181 -14 3 979 252 167 0 0 chr13 51684410 51684458 -68599854 + GA-rich Low_complexity Low_complexity 1 48 0 3 979 385 312 159 57 chr13 51684789 51685034 -68599278 + L1MDb LINE L1 842 1111 -5429 3 979 515 288 41 60 chr13 51685043 51685361 -68598951 + L1MDb LINE L1 1233 1544 -4996 3 979 1267 41 0 0 chr13 51685493 51685640 -68598672 + B1_Mm SINE Alu 1 147 0 3 979 760 228 34 0 chr13 51685660 51685809 -68598503 + B3A SINE B2 27 180 -18 3 979 1260 243 68 127 chr13 51685805 51685872 -68598440 - MT2A LTR ERVL -90 443 376 3 979 960 153 57 6 chr13 51685872 51686049 -68598263 + B2_Mm2 SINE B2 2 187 -8 3 979 1260 243 68 127 chr13 51686049 51686452 -68597860 - MT2A LTR ERVL -158 375 1 3 979 274 215 200 0 chr13 51686452 51686517 -68597795 + MTE-int LTR MaLR 180 257 -1323 3 979 343 245 33 83 chr13 51686542 51686662 -68597650 + B3A SINE B2 68 181 -17 3 979 1435 298 66 35 chr13 51686685 51687199 -68597113 + MTE-int LTR MaLR 311 840 -740 3 979 468 312 93 90 chr13 51687199 51687276 -68597036 + L1MDb LINE L1 3353 3429 -3108 3 979 1175 75 0 0 chr13 51687276 51687423 -68596889 + B1_Mus2 SINE Alu 1 147 0 3 979 468 314 78 81 chr13 51687423 51687713 -68596599 + L1MDb LINE L1 3430 3723 -2814 3 979 377 58 0 0 chr13 51687714 51687769 -68596543 + B1_Mm SINE Alu 53 134 -13 3 979 315 0 0 0 chr13 51687769 51687804 -68596508 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 3 979 755 279 134 34 chr13 51687811 51688169 -68596143 + L1MDb LINE L1 3743 4150 -2387 3 979 2033 112 81 6 chr13 51688169 51688503 -68595809 + RLTR15 LTR ERVK 1 359 0 3 979 755 279 134 34 chr13 51688503 51688638 -68595674 + L1MDb LINE L1 4151 4285 -2252 3 979 248 167 111 0 chr13 51688665 51688737 -68595575 - Lx8 LINE L1 0 7473 7394 3 979 1087 137 5 2 chr13 51688758 51689177 -68595135 + (TG)n Simple_repeat Simple_repeat 1 420 0 3 979 836 278 188 3 chr13 51689231 51689556 -68594756 - Lx8 LINE L1 -374 7099 6715 3 979 225 0 0 0 chr13 51690759 51690784 -68593528 + (A)n Simple_repeat Simple_repeat 1 25 0 3 979 414 0 0 0 chr13 51691373 51691419 -68592893 + (TTG)n Simple_repeat Simple_repeat 2 47 0 3 979 379 240 95 9 chr13 51691443 51691548 -68592764 - ID_B1 SINE B4 -11 213 100 3 979 367 184 88 97 chr13 51692803 51692917 -68591395 - MTEa LTR MaLR 0 379 267 3 979 687 189 5 29 chr13 51692921 51693069 -68591243 - MTD LTR MaLR -2 417 234 3 979 1271 34 0 0 chr13 51693168 51693315 -68590997 + B1_Mm SINE Alu 1 147 0 3 979 434 236 62 164 chr13 51693618 51693892 -68590420 - MER31A LTR ERV1 -74 411 166 3 979 369 0 0 0 chr13 51694337 51694378 -68589934 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 979 642 270 28 22 chr13 51694761 51694943 -68589369 + B4 SINE B4 67 249 -43 3 979 272 289 119 34 chr13 51694969 51695087 -68589225 - MLT2B5 LTR ERVL -71 484 357 3 979 285 229 23 0 chr13 51696621 51696752 -68587560 + (TG)n Simple_repeat Simple_repeat 2 135 0 3 979 957 229 92 53 chr13 51696755 51697036 -68587276 - B4 SINE B4 0 292 1 3 979 242 306 34 67 chr13 51697059 51697178 -68587134 - MLT1J LTR MaLR -3 509 395 3 979 304 314 196 6 chr13 51697266 51697277 -68587035 + B4A SINE B4 80 112 -180 3 979 516 236 18 9 chr13 51697277 51697388 -68586924 + PB1D10 SINE Alu 6 117 0 3 979 304 314 196 6 chr13 51697388 51697439 -68586873 + B4A SINE B4 113 285 -7 3 979 843 265 43 79 chr13 51697444 51697648 -68586664 + B4A SINE B4 21 231 -61 3 979 824 156 0 39 chr13 51697648 51697801 -68586511 + B1_Mur2 SINE Alu 2 148 -1 3 979 843 265 43 79 chr13 51697801 51697875 -68586437 + B4A SINE B4 232 289 -3 3 979 476 32 16 0 chr13 51697937 51697999 -68586313 + (GA)n Simple_repeat Simple_repeat 1 63 0 3 979 1256 104 60 0 chr13 51698015 51698198 -68586114 + B2_Mm2 SINE B2 1 194 -1 3 979 235 319 0 0 chr13 51698222 51698291 -68586021 - MLT1J LTR MaLR -357 155 87 3 979 741 309 50 4 chr13 51699800 51700079 -68584233 - B4A SINE B4 0 292 1 3 979 1362 143 270 12 chr13 51700206 51700525 -68583787 + RLTR9D LTR ERVK 1 401 -2 3 979 209 107 17 51 chr13 51701005 51701049 -68583263 + (GTTTG)n Simple_repeat Simple_repeat 3 43 0 3 979 838 58 389 0 chr13 51701049 51701066 -68583246 - B2_Mm1a SINE B2 0 193 177 3 979 180 0 0 0 chr13 51701066 51701086 -68583226 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 3 979 838 58 389 0 chr13 51701086 51701207 -68583105 - B2_Mm1a SINE B2 -17 176 3 3 979 209 107 17 51 chr13 51701207 51701221 -68583091 + (GTTTG)n Simple_repeat Simple_repeat 3 17 0 4 979 1224 94 44 11 chr13 51701811 51701993 -68582319 + B2_Mm2 SINE B2 4 191 -4 4 979 654 146 0 0 chr13 51701993 51702103 -68582209 + (GGA)n Simple_repeat Simple_repeat 1 110 0 4 979 1142 112 0 6 chr13 51702103 51702282 -68582030 + (GAA)n Simple_repeat Simple_repeat 3 180 0 4 979 1424 79 11 0 chr13 51702405 51702594 -68581718 - B2_Mm1t SINE B2 -2 191 1 4 979 274 357 36 0 chr13 51703759 51703843 -68580469 + B1F SINE Alu 63 149 0 4 979 579 194 29 0 chr13 51703866 51703969 -68580343 + PB1D10 SINE Alu 9 114 -3 4 979 375 154 0 0 chr13 51703976 51704041 -68580271 + (ATG)n Simple_repeat Simple_repeat 2 66 0 4 979 408 168 26 13 chr13 51704300 51704451 -68579861 + (CA)n Simple_repeat Simple_repeat 2 154 0 4 979 21 0 0 0 chr13 51704451 51704472 -68579840 + AT_rich Low_complexity Low_complexity 1 21 0 4 979 224 271 176 56 chr13 51704472 51704597 -68579715 + B3A SINE B2 58 197 -1 4 979 29 78 0 0 chr13 51704597 51704661 -68579651 + AT_rich Low_complexity Low_complexity 1 64 0 4 979 998 212 43 5 chr13 51704682 51704890 -68579422 + B3 SINE B2 1 216 0 4 979 1204 21 14 0 chr13 51704897 51705038 -68579274 + B1_Mm SINE Alu 2 144 -3 4 979 516 32 0 0 chr13 51705052 51705114 -68579198 + (GGA)n Simple_repeat Simple_repeat 3 64 0 4 979 291 352 38 11 chr13 51705129 51705313 -68578999 + L1M4 LINE L1 5065 5253 -893 4 979 546 320 61 57 chr13 51705368 51705604 -68578708 + L1M4 LINE L1 5319 5557 -626 4 979 785 185 13 27 chr13 51705604 51705754 -68578558 + B1_Mus1 SINE Alu 1 148 0 4 979 546 320 61 57 chr13 51705754 51705812 -68578500 + L1M4 LINE L1 5558 5607 -576 4 979 742 123 154 0 chr13 51705812 51705942 -68578370 - B1_Mur4 SINE Alu 0 150 1 4 979 546 320 61 57 chr13 51705942 51706139 -68578173 + L1M4 LINE L1 5608 5811 -372 4 979 710 237 167 104 chr13 51706147 51706368 -68577944 + ID_B1 SINE B4 3 237 -55 4 979 279 284 68 43 chr13 51706228 51706390 -68577922 - YREP_Mm Unknown Unknown -1517 295 130 4 979 1056 45 0 15 chr13 51707496 51707631 -68576681 - B1_Mus1 SINE Alu 0 148 16 4 979 603 218 115 7 chr13 51707626 51707774 -68576538 - B3 SINE B2 -46 170 7 4 979 207 0 0 0 chr13 51707794 51707817 -68576495 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 979 22 35 0 0 chr13 51707960 51707989 -68576323 + AT_rich Low_complexity Low_complexity 1 29 0 4 979 213 200 222 12 chr13 51708166 51708247 -68576065 - MER5A DNA MER1_type -74 115 18 4 979 1164 282 121 25 chr13 51708393 51709048 -68575264 - L1MA9 LINE L1 -2 6546 5818 4 979 320 308 179 8 chr13 51709231 51709493 -68574819 - L1MA9 LINE L1 -3072 3304 2998 4 979 698 211 0 8 chr13 51709500 51709629 -68574683 - B1F SINE Alu 0 149 22 4 979 816 267 108 45 chr13 51709638 51709799 -68574513 - L1MA9 LINE L1 -3368 3008 2839 4 979 405 0 0 0 chr13 51709799 51709844 -68574468 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 4 979 1232 15 0 0 chr13 51709844 51709981 -68574331 - B1_Mus2 SINE Alu -10 137 1 4 979 816 267 108 45 chr13 51709981 51710242 -68574070 - L1MA9 LINE L1 -3538 2838 2559 4 979 366 23 0 0 chr13 51710293 51710336 -68573976 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 979 741 298 76 55 chr13 51710375 51710978 -68573334 - L1MA9 LINE L1 -4533 1780 1016 4 979 650 303 78 2 chr13 51710973 51711336 -68572976 - L1MA9 LINE L1 -5070 1243 803 4 979 1031 281 81 78 chr13 51711346 51711705 -68572607 - MTE2b LTR MaLR -10 369 10 4 979 382 348 58 46 chr13 51711976 51712301 -68572011 - L1MA9 LINE L1 -5800 513 185 4 979 452 225 48 55 chr13 51712473 51712619 -68571693 + B1F SINE Alu 5 149 0 4 979 297 109 0 0 chr13 51712627 51712682 -68571630 + (A)n Simple_repeat Simple_repeat 1 55 0 4 979 474 0 45 0 chr13 51712737 51712803 -68571509 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 979 208 121 0 0 chr13 51713068 51713101 -68571211 + (TTGG)n Simple_repeat Simple_repeat 2 34 0 4 979 268 281 16 0 chr13 51713390 51713454 -68570858 + GA-rich Low_complexity Low_complexity 3 67 0 4 979 527 305 117 75 chr13 51714060 51714292 -68570020 + MTEa LTR MaLR 7 237 -142 4 979 649 0 25 0 chr13 51714292 51714373 -68569939 + (TC)n Simple_repeat Simple_repeat 1 83 0 4 979 527 305 117 75 chr13 51714373 51714498 -68569814 + MTEa LTR MaLR 238 379 0 4 979 1069 69 0 0 chr13 51714646 51714777 -68569535 - B1_Mus1 SINE Alu -13 135 5 4 979 220 170 104 21 chr13 51714954 51715002 -68569310 + PB1D9 SINE Alu 19 71 -77 4 979 1953 136 29 63 chr13 51715002 51715153 -68569159 - L1_Mur3 LINE L1 -4246 1634 1504 4 979 1426 74 11 11 chr13 51715153 51715344 -68568968 - B2_Mm2 SINE B2 -3 192 2 4 979 1953 114 34 52 chr13 51715344 51715742 -68568570 - L1_Mur3 LINE L1 -4377 1503 1103 4 979 216 97 0 0 chr13 51715749 51715780 -68568532 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 4 979 339 264 65 19 chr13 51715818 51715926 -68568386 + Lx7 LINE L1 7189 7301 -395 4 979 218 109 43 0 chr13 51715938 51715984 -68568328 + T-rich Low_complexity Low_complexity 4 51 0 4 979 213 65 0 0 chr13 51716060 51716091 -68568221 + (TTTTTG)n Simple_repeat Simple_repeat 1 31 0 4 979 215 93 23 0 chr13 51716652 51716695 -68567617 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 4 979 1278 27 0 0 chr13 51716695 51716841 -68567471 - B1_Mm SINE Alu 0 147 2 4 979 1229 137 11 0 chr13 51716872 51717062 -68567250 + B2_Mm1t SINE B2 2 193 0 4 979 824 88 7 0 chr13 51717693 51717829 -68566483 + (TCTA)n Simple_repeat Simple_repeat 3 139 0 4 979 180 0 0 0 chr13 51718371 51718391 -68565921 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 979 348 24 0 0 chr13 51718394 51718435 -68565877 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 979 397 107 330 55 chr13 51718435 51718544 -68565768 - B2_Mm2 SINE B2 -10 185 47 4 979 1231 97 29 0 chr13 51718591 51718766 -68565546 - B2_Mm2 SINE B2 -14 181 2 4 979 1980 196 40 12 chr13 51718824 51719226 -68565086 - MTC LTR MaLR -8 413 1 4 979 4435 84 16 0 chr13 51719586 51720160 -68564152 - MT2B2 LTR ERVL -1 583 1 4 979 410 233 102 70 chr13 51720191 51720348 -68563964 - ORR1A3-int LTR MaLR -1309 654 493 4 979 6547 134 22 22 chr13 51720360 51720403 -68563909 - MERVL-int LTR ERVL -242 5519 5481 4 979 1300 108 16 16 chr13 51720403 51720591 -68563721 - B2_Mm2 SINE B2 -7 188 1 4 979 6547 134 22 22 chr13 51720591 51721545 -68562767 - MERVL-int LTR ERVL -281 5480 4522 4 979 15334 86 11 9 chr13 51721547 51723588 -68560724 - MERVL-int LTR ERVL -1179 4306 2261 4 979 2422 168 261 11 chr13 51723602 51724223 -68560089 + RMER21B LTR ERV1 1 842 0 4 979 315 0 0 0 chr13 51724823 51724858 -68559454 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 4 979 479 211 119 9 chr13 51724862 51724985 -68559327 - B1_Mur1 SINE Alu 0 149 8 4 979 234 340 112 68 chr13 51724985 51725019 -68559293 - B4 SINE B4 -62 226 63 4 979 1518 50 22 0 chr13 51725376 51725558 -68558754 + B2_Mm1t SINE B2 1 186 -7 4 979 1094 120 35 12 chr13 51725586 51725755 -68558557 + B2_Mm2 SINE B2 9 181 -14 4 979 1230 111 91 14 chr13 51725952 51726162 -68558150 + URR1A DNA MER1_type 1 226 0 4 979 773 199 43 0 chr13 51726513 51726654 -68557658 + B1_Mur2 SINE Alu 1 147 -2 4 979 2130 179 43 15 chr13 51726993 51727390 -68556922 + MTC LTR MaLR 6 413 -8 4 979 1247 34 0 0 chr13 51727393 51727539 -68556773 + B1_Mm SINE Alu 1 146 -1 4 979 612 272 114 172 chr13 51727812 51728154 -68556158 + MTE2b LTR MaLR 6 327 -52 4 979 335 312 35 9 chr13 51728163 51728276 -68556036 + PB1D10 SINE Alu 1 116 -1 4 979 734 134 254 6 chr13 51728390 51728563 -68555749 - B3 SINE B2 0 216 1 4 979 470 168 80 98 chr13 51728728 51728840 -68555472 - B3 SINE B2 -106 110 1 4 979 448 245 74 19 chr13 51728867 51728975 -68555337 - MT2A LTR ERVL -69 464 351 4 979 741 169 89 0 chr13 51729000 51729124 -68555188 - B1_Mus1 SINE Alu -8 140 6 4 979 806 180 13 20 chr13 51729133 51729286 -68555026 - MT2A LTR ERVL -174 359 208 4 979 3096 85 171 13 chr13 51729297 51729836 -68554476 - RLTR6_Mm LTR ERV1 -30 624 1 4 979 18647 40 49 6 chr13 51729836 51732178 -68552134 - MMVL30-int LTR ERV1 0 3698 960 4 979 6101 81 29 40 chr13 51732253 51733879 -68550433 - MMVL30-int LTR ERV1 -2230 1468 1 4 979 3267 80 163 16 chr13 51733879 51734436 -68549876 - RLTR6_Mm LTR ERV1 -15 639 1 4 979 465 242 50 50 chr13 51734436 51734556 -68549756 - MT2A LTR ERVL -283 250 131 4 979 422 184 94 26 chr13 51734954 51735071 -68549241 + RMER5 LTR ERV1 37 161 -373 4 979 246 273 0 0 chr13 51735074 51735129 -68549183 - B1F1 SINE Alu -90 59 5 4 979 1174 120 46 0 chr13 51735143 51735318 -68548994 - B2_Mm2 SINE B2 -9 186 4 4 979 760 252 157 33 chr13 51735391 51735935 -68548377 - L1MA4 LINE L1 -259 6041 5422 4 979 344 198 81 90 chr13 51735935 51736046 -68548266 - MTEb LTR MaLR -249 130 21 4 979 1156 43 14 0 chr13 51736377 51736517 -68547795 + B1_Mus1 SINE Alu 1 142 -6 4 979 297 0 0 0 chr13 51736517 51736550 -68547762 + (TAA)n Simple_repeat Simple_repeat 2 34 0 4 979 390 165 213 47 chr13 51736700 51736827 -68547485 + B1_Mur3 SINE Alu 1 148 -1 4 979 314 242 32 0 chr13 51736898 51736960 -68547352 + L1MEg LINE L1 1877 1940 -4144 4 979 436 326 15 8 chr13 51737385 51737515 -68546797 - RSINE1 SINE B4 -31 134 4 4 979 616 295 84 92 chr13 51737544 51737783 -68546529 - B4A SINE B4 0 292 56 4 979 284 279 99 99 chr13 51737826 51737977 -68546335 - MLT1H1 LTR MaLR -310 245 95 4 979 189 0 0 0 chr13 51738381 51738402 -68545910 + (CTTA)n Simple_repeat Simple_repeat 2 22 0 4 979 330 47 0 0 chr13 51738405 51738448 -68545864 - B1_Mus1 SINE Alu -104 44 2 4 979 448 264 49 14 chr13 51738454 51738596 -68545716 - B1F1 SINE Alu -1 148 2 4 979 219 139 0 0 chr13 51738679 51738715 -68545597 + (T)n Simple_repeat Simple_repeat 1 36 0 4 979 1007 80 73 0 chr13 51738715 51738852 -68545460 - B1_Mus2 SINE Alu 0 147 1 4 979 181 358 53 44 chr13 51738874 51738988 -68545324 - L2a LINE L2 -21 3405 3291 4 979 706 130 137 0 chr13 51739112 51739243 -68545069 + URR1A DNA MER1_type 78 226 0 4 979 381 296 90 90 chr13 51739243 51739379 -68544933 - CYRA11_Mm Unknown Y-chromosome -297 320 54 4 979 899 117 14 14 chr13 51739631 51739770 -68544542 + B1_Mur4 SINE Alu 1 139 -11 4 979 261 0 0 0 chr13 51739770 51739799 -68544513 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 979 1155 74 0 7 chr13 51739802 51739951 -68544361 + B1_Mus1 SINE Alu 1 148 0 5 979 232 179 0 0 chr13 51740006 51740045 -68544267 + MurSatRep1 Unknown Unknown 245 283 -1854 5 979 217 160 160 0 chr13 51742405 51742455 -68541857 - B1_Mur2 SINE Alu -7 142 85 5 979 1088 82 7 20 chr13 51742810 51742959 -68541353 + B1_Mus1 SINE Alu 2 148 0 5 979 300 270 75 87 chr13 51743707 51743822 -68540490 + PB1D7 SINE Alu 5 117 -3 5 979 1008 40 72 0 chr13 51743973 51744098 -68540214 + B1_Mm SINE Alu 1 134 -13 5 979 25 0 0 0 chr13 51747787 51747812 -68536500 + AT_rich Low_complexity Low_complexity 1 25 0 5 979 211 121 0 0 chr13 51748559 51748592 -68535720 + PB1 SINE Alu 84 116 -11 5 979 1163 74 0 0 chr13 51749073 51749221 -68535091 + B1_Mus1 SINE Alu 1 148 0 5 979 264 59 0 0 chr13 51749263 51749297 -68535015 + (TGGG)n Simple_repeat Simple_repeat 3 36 0 5 979 604 291 69 22 chr13 51749337 51749611 -68534701 - B4A SINE B4 -4 288 2 5 979 1446 83 16 0 chr13 51750211 51750403 -68533909 - B2_Mm2 SINE B2 0 195 1 5 979 372 336 0 50 chr13 51751070 51751189 -68533123 - PB1D10 SINE Alu -2 115 3 5 979 566 243 32 25 chr13 51751305 51751494 -68532818 - B3 SINE B2 0 195 9 5 979 747 184 57 0 chr13 51751540 51751681 -68532631 - B1_Mur3 SINE Alu 0 149 1 5 979 1154 101 83 11 chr13 51752966 51753146 -68531166 - B2_Mm1t SINE B2 0 193 1 5 979 23 33 0 0 chr13 51753220 51753250 -68531062 + AT_rich Low_complexity Low_complexity 1 30 0 5 979 242 264 157 59 chr13 51753292 51753445 -68530867 - ORR1E LTR MaLR -2 377 210 5 979 345 311 84 0 chr13 51753485 51753604 -68530708 - ORR1E LTR MaLR -228 131 3 5 979 1230 96 90 0 chr13 51754131 51754309 -68530003 - B2_Mm2 SINE B2 -1 194 1 5 979 1215 129 11 0 chr13 51754329 51754515 -68529797 - B2_Mm1t SINE B2 -3 190 3 5 979 21 0 0 0 chr13 51754582 51754603 -68529709 + AT_rich Low_complexity Low_complexity 1 21 0 5 979 857 162 31 72 chr13 51754614 51754807 -68529505 + B2_Mm2 SINE B2 3 187 -8 5 979 180 97 0 0 chr13 51754849 51754880 -68529432 + (T)n Simple_repeat Simple_repeat 1 31 0 5 979 1092 45 0 0 chr13 51754880 51755013 -68529299 - B1_Mus1 SINE Alu 0 148 16 5 979 613 265 21 16 chr13 51755031 51755219 -68529093 - B3A SINE B2 -6 192 4 5 979 481 266 87 58 chr13 51755260 51755535 -68528777 + B4A SINE B4 2 284 -8 5 979 1161 207 5 0 chr13 51756024 51756227 -68528085 + B3 SINE B2 2 205 -11 5 979 1216 90 79 0 chr13 51756227 51756404 -68527908 - B2_Mm2 SINE B2 -4 191 1 5 979 1861 128 179 3 chr13 51756642 51756994 -68527318 - RMER4B LTR ERVK -171 414 1 5 979 1366 68 23 0 chr13 51757107 51757283 -68527029 - B2_Mm2 SINE B2 -15 180 1 5 979 23 0 0 0 chr13 51757287 51757310 -68527002 + AT_rich Low_complexity Low_complexity 1 23 0 5 979 374 141 57 34 chr13 51757365 51757453 -68526859 - L1MC1 LINE L1 0 6333 6244 5 979 357 222 118 59 chr13 51757835 51757988 -68526324 - L1MC LINE L1 -788 5545 5384 5 979 472 222 213 0 chr13 51758343 51758451 -68525861 + B1F SINE Alu 13 143 -6 5 979 219 36 0 0 chr13 51759935 51759963 -68524349 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 979 813 207 0 0 chr13 51759964 51760099 -68524213 - B1_Mur4 SINE Alu -10 140 6 5 979 400 169 0 0 chr13 51760108 51760173 -68524139 - RLTR11A2 LTR ERVK 0 527 463 5 979 2179 119 9 14 chr13 51760153 51760501 -68523811 - RLTR15 LTR ERVK -13 346 1 5 979 487 238 19 0 chr13 51760877 51760982 -68523330 + PB1D10 SINE Alu 3 109 -8 5 979 220 337 10 30 chr13 51761695 51761796 -68522516 - PB1D7 SINE Alu -2 118 20 5 979 447 19 0 0 chr13 51761939 51761991 -68522321 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 979 356 254 88 0 chr13 51761991 51762105 -68522207 - MTEa LTR MaLR -61 318 195 5 979 759 138 24 0 chr13 51762144 51762267 -68522045 + B1_Mur4 SINE Alu 16 141 -9 5 979 3408 40 0 17 chr13 51762759 51763166 -68521146 + MTB LTR MaLR 1 400 0 5 979 6469 87 28 124 chr13 51763166 51763424 -68520888 + MTB-int LTR MaLR 1 262 -836 5 979 3244 60 121 35 chr13 51763424 51763886 -68520426 - RLTR44C LTR ERVK 0 502 1 5 979 6469 87 28 124 chr13 51763886 51764704 -68519608 + MTB-int LTR MaLR 263 980 -118 5 979 1191 82 0 0 chr13 51764704 51764850 -68519462 - B1_Mm SINE Alu 0 147 2 5 979 6469 87 28 124 chr13 51764850 51764986 -68519326 + MTB-int LTR MaLR 981 1098 0 5 979 1814 39 9 0 chr13 51764986 51765215 -68519097 + MTB LTR MaLR 1 231 -169 5 979 657 191 91 13 chr13 51765959 51765990 -68518322 - B2_Mm2 SINE B2 0 195 158 5 979 279 0 0 0 chr13 51765990 51766021 -68518291 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 979 657 191 91 13 chr13 51766021 51766143 -68518169 - B2_Mm2 SINE B2 -38 157 30 5 979 453 261 0 48 chr13 51766415 51766540 -68517772 + ID_B1 SINE B4 84 202 -22 5 979 183 100 0 0 chr13 51767243 51767273 -68517039 + (TCTG)n Simple_repeat Simple_repeat 1 30 0 5 979 1667 26 0 10 chr13 51767537 51767731 -68516581 - B2_Mm1a SINE B2 0 193 2 5 979 3141 36 2 107 chr13 51767731 51767785 -68516527 - MTA_Mm LTR MaLR -4 392 355 5 979 1195 48 7 0 chr13 51767785 51767930 -68516382 + B1_Mus2 SINE Alu 2 147 0 5 979 3141 36 2 107 chr13 51767930 51768313 -68515999 - MTA_Mm LTR MaLR -42 354 1 5 979 406 239 31 15 chr13 51768855 51768971 -68515341 - PB1D7 SINE Alu -2 118 1 5 979 221 191 21 21 chr13 51769557 51769605 -68514707 + B1F1 SINE Alu 93 140 -9 5 979 332 185 0 0 chr13 51769639 51769693 -68514619 + B1_Mm SINE Alu 94 147 0 5 979 213 293 40 0 chr13 51769750 51769825 -68514487 - RSINE1 SINE B4 -85 80 3 5 979 1171 204 25 13 chr13 51769946 51770184 -68514128 - ORR1D1 LTR MaLR -133 241 1 5 979 566 297 88 25 chr13 51770263 51770501 -68513811 - B4A SINE B4 -11 281 29 5 979 237 214 28 14 chr13 51771915 51771986 -68512326 - ID4 SINE ID -10 73 2 5 979 186 103 0 0 chr13 51772451 51772480 -68511832 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 5 980 293 239 76 76 chr13 51773600 51773718 -68510594 - B1F SINE Alu 0 149 32 5 980 479 255 49 14 chr13 51773732 51773875 -68510437 - B1_Mur1 SINE Alu 0 149 2 5 980 366 80 0 0 chr13 51774670 51774720 -68509592 + (TTCC)n Simple_repeat Simple_repeat 2 51 0 5 980 371 225 50 75 chr13 51774727 51774847 -68509465 - PB1D10 SINE Alu 0 117 1 5 980 275 305 85 8 chr13 51777105 51777234 -68507078 + MIR SINE MIR 103 241 -21 5 980 1217 48 7 0 chr13 51778071 51778216 -68506096 + B1_Mus2 SINE Alu 2 147 0 5 980 207 69 0 0 chr13 51781800 51781829 -68502483 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 5 980 1027 49 97 0 chr13 51781830 51781974 -68502338 - B2_Mm2 SINE B2 -37 158 1 5 980 450 301 37 0 chr13 51782959 51783095 -68501217 - B1F SINE Alu -2 147 7 5 980 1889 76 103 3 chr13 51783386 51783676 -68500636 - ORR1A2 LTR MaLR -8 319 1 5 980 192 261 0 21 chr13 51784710 51784757 -68499555 - MER5A DNA MER1_type -137 52 7 5 980 1191 50 0 0 chr13 51784925 51785064 -68499248 + B1_Mus1 SINE Alu 1 139 -9 5 980 336 259 68 0 chr13 51785619 51785720 -68498592 + PB1D7 SINE Alu 4 113 -7 5 980 836 287 8 15 chr13 51785892 51786143 -68498169 - B4 SINE B4 -19 273 31 5 980 452 256 82 8 chr13 51786128 51786250 -68498062 - RSINE1 SINE B4 -33 132 2 5 980 273 264 115 0 chr13 51786250 51786335 -68497977 - B4 SINE B4 -197 95 1 5 980 292 291 0 60 chr13 51787192 51787276 -68497036 - ID_B1 SINE B4 -66 158 80 5 980 210 143 0 0 chr13 51787280 51787305 -68497007 + (T)n Simple_repeat Simple_repeat 1 25 0 5 980 1698 26 0 0 chr13 51787305 51787496 -68496816 - B2_Mm1a SINE B2 -1 192 2 5 980 210 143 0 0 chr13 51787496 51787512 -68496800 + (T)n Simple_repeat Simple_repeat 1 16 0 5 980 569 176 45 36 chr13 51787542 51787654 -68496658 + PB1D9 SINE Alu 1 113 -7 5 980 495 0 0 0 chr13 51787827 51787882 -68496430 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 980 210 71 0 0 chr13 51788335 51788363 -68495949 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 980 980 224 47 5 chr13 51788625 51788840 -68495472 - ID_B1 SINE B4 0 224 1 5 980 499 304 10 80 chr13 51789265 51789465 -68494847 - B4A SINE B4 -18 274 89 5 980 728 225 128 0 chr13 51789534 51789721 -68494591 - B3 SINE B2 -5 211 1 5 980 562 268 0 74 chr13 51789819 51789968 -68494344 + B1F1 SINE Alu 5 142 -7 5 980 381 222 44 44 chr13 51790253 51790366 -68493946 - MER2B DNA MER2_type -74 262 150 5 980 376 187 53 0 chr13 51791058 51791133 -68493179 + MTE2a LTR MaLR 1 79 -300 5 980 510 235 33 8 chr13 51791142 51791262 -68493050 + B1_Mur1 SINE Alu 9 131 -18 5 980 269 169 50 17 chr13 51791346 51791406 -68492906 + MTEb LTR MaLR 292 353 -26 5 980 237 178 37 65 chr13 51792854 51792962 -68491350 + (GTGTG)n Simple_repeat Simple_repeat 1 105 0 5 980 489 76 0 0 chr13 51794112 51794178 -68490134 + (CGTG)n Simple_repeat Simple_repeat 2 67 0 5 980 482 327 29 24 chr13 51794201 51794411 -68489901 - B4A SINE B4 -79 213 3 5 980 288 321 49 21 chr13 51794699 51794842 -68489470 + LTR33A LTR ERVL 356 502 -18 5 980 513 296 94 53 chr13 51794989 51795160 -68489152 + B3A SINE B2 10 187 -11 5 980 233 217 16 32 chr13 51795876 51795938 -68488374 - B1F SINE Alu -13 136 76 5 980 22 0 0 0 chr13 51797557 51797579 -68486733 + AT_rich Low_complexity Low_complexity 1 22 0 5 980 354 98 0 0 chr13 51799585 51799636 -68484676 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 980 901 203 126 41 chr13 51799647 51799893 -68484419 - B4 SINE B4 -22 270 4 5 980 914 254 138 104 chr13 51800784 51800911 -68483401 + MTD LTR MaLR 1 104 -315 6 980 875 78 155 0 chr13 51800911 51801040 -68483272 - B1_Mur4 SINE Alu 0 150 2 6 980 914 254 138 104 chr13 51801040 51801167 -68483145 + MTD LTR MaLR 105 247 -172 6 980 207 0 0 0 chr13 51801167 51801190 -68483122 + (C)n Simple_repeat Simple_repeat 1 23 0 6 980 914 254 138 104 chr13 51801190 51801339 -68482973 + MTD LTR MaLR 248 419 0 6 980 349 315 119 22 chr13 51801671 51801856 -68482456 + RMER15 LTR ERVL 346 548 -27 6 980 1162 74 0 20 chr13 51802806 51802957 -68481355 - B1_Mus1 SINE Alu 0 148 1 6 980 1283 71 53 32 chr13 51802957 51803146 -68481166 - B2_Mm2 SINE B2 -1 194 1 6 980 546 285 0 8 chr13 51803181 51803312 -68481000 - ID_B1 SINE B4 -1 223 94 6 980 325 319 0 31 chr13 51803229 51803326 -68480986 - PB1D10 SINE Alu -23 94 1 6 980 351 0 0 0 chr13 51803346 51803385 -68480927 + (TTCA)n Simple_repeat Simple_repeat 3 41 0 6 980 860 206 0 0 chr13 51803385 51803526 -68480786 - B1_Mur4 SINE Alu -9 141 1 6 980 1500 68 16 16 chr13 51803715 51803909 -68480403 - B2_Mm2 SINE B2 -1 194 1 6 980 198 0 0 0 chr13 51804210 51804232 -68480080 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 6 980 1289 34 0 0 chr13 51804449 51804595 -68479717 - B1_Mus2 SINE Alu 0 147 2 6 980 883 26 18 0 chr13 51805813 51805927 -68478385 + (GA)n Simple_repeat Simple_repeat 2 117 0 6 980 242 362 0 0 chr13 51807461 51807530 -68476782 + Tigger7 DNA MER2_type 9 77 -2414 6 980 649 288 212 4 chr13 51807615 51807856 -68476456 - B4A SINE B4 0 292 2 6 980 259 275 0 28 chr13 51807900 51807971 -68476341 + Tigger7 DNA MER2_type 2328 2396 -95 6 980 645 319 19 14 chr13 51809563 51809779 -68474533 - Tigger5 DNA MER2_type -32 2374 2158 6 980 810 153 72 7 chr13 51811279 51811417 -68472895 + B1_Mus2 SINE Alu 1 147 0 6 980 1316 179 122 35 chr13 51811704 51812016 -68472296 - MTD LTR MaLR -68 351 13 6 980 380 282 0 60 chr13 51812628 51812813 -68471499 + G-rich Low_complexity Low_complexity 2 175 0 6 980 383 294 0 38 chr13 51812844 51813028 -68471284 + G-rich Low_complexity Low_complexity 3 179 0 6 980 249 359 0 0 chr13 51813006 51813137 -68471175 + GA-rich Low_complexity Low_complexity 2 132 0 6 980 396 0 0 0 chr13 51813259 51813303 -68471009 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 980 259 164 16 16 chr13 51813543 51813605 -68470707 + (TATG)n Simple_repeat Simple_repeat 1 62 0 6 980 2666 70 0 3 chr13 51813682 51814010 -68470302 + ORR1A2 LTR MaLR 1 327 0 6 980 248 200 45 30 chr13 51814555 51814622 -68469690 + MTEa LTR MaLR 308 375 -4 6 980 401 269 194 21 chr13 51814633 51814819 -68469493 + RLTR42-int LTR ERVK 1148 1365 -4157 6 980 3330 53 2 12 chr13 51815398 51815802 -68468510 + MTB LTR MaLR 1 400 0 6 980 219 36 0 0 chr13 51816598 51816626 -68467686 + (TTG)n Simple_repeat Simple_repeat 1 28 0 6 980 1187 55 7 0 chr13 51816881 51817027 -68467285 - B1_Mus2 SINE Alu 0 147 1 6 980 269 185 0 36 chr13 51817270 51817354 -68466958 + A-rich Low_complexity Low_complexity 4 84 0 6 980 656 203 196 94 chr13 51818022 51818267 -68466045 + B4 SINE B4 2 271 -21 6 980 404 304 25 19 chr13 51818484 51818563 -68465749 - RSINE1 SINE B4 -2 163 82 6 980 441 0 0 0 chr13 51818563 51818612 -68465700 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 980 404 304 25 19 chr13 51818612 51818693 -68465619 - RSINE1 SINE B4 -84 81 3 6 980 2435 104 3 0 chr13 51819321 51819649 -68464663 + ORR1A4 LTR MaLR 1 329 0 6 980 236 256 61 49 chr13 51819786 51819868 -68464444 + ID4 SINE ID 1 83 0 6 980 463 212 30 1 chr13 51820000 51820118 -68464194 - PB1D7 SINE Alu -13 136 17 6 980 22 0 0 0 chr13 51821954 51821976 -68462336 + AT_rich Low_complexity Low_complexity 1 22 0 6 980 1607 32 16 0 chr13 51822011 51822200 -68462112 - B2_Mm1t SINE B2 -1 192 1 6 980 1379 66 49 5 chr13 51823018 51823202 -68461110 + B2_Mm1t SINE B2 2 193 0 6 980 601 289 126 9 chr13 51823220 51823426 -68460886 + ID_B1 SINE B4 14 238 -54 6 980 268 217 205 0 chr13 51823439 51823522 -68460790 + B1_Mur1 SINE Alu 9 108 -41 6 980 248 295 104 9 chr13 51823519 51823625 -68460687 + B1F2 SINE Alu 23 138 -11 6 980 221 193 53 0 chr13 51823629 51823686 -68460626 + (TTAA)n Simple_repeat Simple_repeat 1 60 0 6 980 189 0 0 0 chr13 51824465 51824486 -68459826 + (A)n Simple_repeat Simple_repeat 1 21 0 6 980 759 194 0 43 chr13 51825051 51825213 -68459099 + B3 SINE B2 1 155 -61 6 980 198 132 37 19 chr13 51825449 51825503 -68458809 + G-rich Low_complexity Low_complexity 3 57 0 6 980 231 384 0 22 chr13 51826277 51826391 -68457921 + (TATG)n Simple_repeat Simple_repeat 3 115 0 6 980 324 0 0 0 chr13 51826391 51826427 -68457885 + (TC)n Simple_repeat Simple_repeat 2 37 0 6 980 231 384 0 22 chr13 51826427 51826448 -68457864 + (TATG)n Simple_repeat Simple_repeat 3 22 0 6 980 239 306 0 45 chr13 51827580 51827669 -68456643 + MLT1A0 LTR MaLR 27 111 -254 6 980 1102 101 0 20 chr13 51828470 51828621 -68455691 - B1_Mus1 SINE Alu 0 148 1 6 980 966 116 0 0 chr13 51828740 51828887 -68455425 + (GGAGAA)n Simple_repeat Simple_repeat 5 151 0 6 980 219 114 0 0 chr13 51829518 51829553 -68454759 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 980 605 200 237 86 chr13 51830224 51830410 -68453902 + B3 SINE B2 3 216 0 6 980 411 268 0 10 chr13 51830439 51830537 -68453775 - PB1D10 SINE Alu -19 98 2 6 980 760 227 119 0 chr13 51830610 51830795 -68453517 + ID_B1 SINE B4 16 222 -2 6 980 560 291 19 19 chr13 51830863 51831024 -68453288 - RSINE1 SINE B4 -2 163 3 6 980 1180 56 7 0 chr13 51831241 51831385 -68452927 - B1_Mus1 SINE Alu -1 147 3 6 980 305 47 0 23 chr13 51832331 51832375 -68451937 + (TGGGGG)n Simple_repeat Simple_repeat 2 44 0 6 980 249 324 102 40 chr13 51832431 51832608 -68451704 + MIRb SINE MIR 58 245 -23 6 980 522 294 24 43 chr13 51832749 51832959 -68451353 + ID_B1 SINE B4 1 206 -18 6 980 329 0 24 0 chr13 51833694 51833735 -68450577 + (TC)n Simple_repeat Simple_repeat 2 43 0 6 980 247 309 25 0 chr13 51833735 51833816 -68450496 - PB1 SINE Alu -2 125 43 6 980 1070 103 0 7 chr13 51833856 51834002 -68450310 - B1_Mur4 SINE Alu -1 149 5 6 980 677 100 40 48 chr13 51834505 51834631 -68449681 - URR1B DNA MER1_type -3 222 98 6 980 382 257 19 19 chr13 51835804 51835907 -68448405 + B4 SINE B4 2 104 -188 6 980 728 167 0 8 chr13 51837482 51837603 -68446709 + B1_Mur1 SINE Alu 30 149 0 6 980 297 158 17 17 chr13 51837757 51837815 -68446497 + B3A SINE B2 5 62 -136 6 980 3029 48 75 3 chr13 51838356 51838732 -68445580 - MTB_Mm LTR MaLR -1 406 4 6 980 415 197 13 34 chr13 51838779 51838882 -68445430 + PB1 SINE Alu 27 149 0 6 980 577 260 64 19 chr13 51838890 51838968 -68445344 + ID_B1 SINE B4 6 90 -134 6 980 310 274 104 0 chr13 51838968 51839074 -68445238 + PB1D10 SINE Alu 1 117 0 6 980 428 197 185 10 chr13 51839245 51839431 -68444881 + ORR1D1 LTR MaLR 1 230 -144 6 980 358 266 38 0 chr13 51840075 51840154 -68444158 - PB1 SINE Alu -19 108 27 6 980 185 0 40 0 chr13 51841983 51842008 -68442304 + (CAA)n Simple_repeat Simple_repeat 2 27 0 6 980 1227 34 0 7 chr13 51842307 51842455 -68441857 + B1_Mm SINE Alu 1 147 0 6 980 216 152 35 71 chr13 51842455 51842535 -68441777 + A-rich Low_complexity Low_complexity 1 77 0 6 980 186 43 0 0 chr13 51844990 51845013 -68439299 + (A)n Simple_repeat Simple_repeat 1 23 0 6 980 351 243 234 71 chr13 51846146 51846385 -68437927 + B4 SINE B4 1 278 -14 6 980 198 91 0 0 chr13 51846467 51846500 -68437812 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 6 980 724 172 36 29 chr13 51846562 51846700 -68437612 - B1_Mur1 SINE Alu -9 140 2 6 980 666 281 6 23 chr13 51847177 51847352 -68436960 + B4A SINE B4 1 172 -120 6 980 512 42 14 0 chr13 51847367 51847438 -68436874 + (CA)n Simple_repeat Simple_repeat 2 73 0 6 980 190 0 0 62 chr13 51847716 51847748 -68436564 + (TGGGGG)n Simple_repeat Simple_repeat 6 35 0 6 980 306 0 0 0 chr13 51849511 51849545 -68434767 + (CAGG)n Simple_repeat Simple_repeat 4 37 0 6 980 359 225 219 24 chr13 51850580 51850703 -68433609 - B1F1 SINE Alu 0 149 3 6 980 231 256 0 60 chr13 51850703 51850775 -68433537 - BC1_Mm scRNA scRNA -70 82 15 6 980 370 200 0 41 chr13 51850705 51850778 -68433534 - ID SINE ID -143 81 12 6 980 1101 82 0 12 chr13 51850749 51850909 -68433403 - B2_Mm2 SINE B2 -37 158 1 6 980 315 269 50 42 chr13 51851637 51851757 -68432555 + RSINE1 SINE B4 21 141 -24 6 980 379 314 25 0 chr13 51852181 51852299 -68432013 - MLT1D LTR MaLR -8 497 377 6 980 551 288 20 77 chr13 51852571 51852820 -68431492 + B4A SINE B4 2 239 -53 6 980 261 0 0 0 chr13 51852886 51852915 -68431397 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 980 192 97 0 0 chr13 51852963 51852994 -68431318 + (C)n Simple_repeat Simple_repeat 1 31 0 6 980 216 154 0 0 chr13 51852998 51853050 -68431262 + (TCTCTG)n Simple_repeat Simple_repeat 3 54 0 6 980 792 169 43 0 chr13 51854282 51854474 -68429838 - B2_Mm2 SINE B2 -2 214 3 6 980 307 103 0 56 chr13 51854506 51854518 -68429794 + A-rich Low_complexity Low_complexity 3 14 0 6 980 1249 48 0 0 chr13 51854518 51854665 -68429647 + B1_Mm SINE Alu 1 147 0 6 980 307 103 0 56 chr13 51854665 51854724 -68429588 + A-rich Low_complexity Low_complexity 15 70 0 6 980 854 250 5 5 chr13 51855962 51856155 -68428157 + B3A SINE B2 6 198 0 6 980 1020 117 28 0 chr13 51856187 51856332 -68427980 + B1_Mur2 SINE Alu 1 149 0 7 980 298 349 91 13 chr13 51856981 51857135 -68427177 - Tigger7 DNA MER2_type -7 2484 2319 7 980 1277 242 73 17 chr13 51858054 51858411 -68425901 + MTEb LTR MaLR 3 379 0 7 980 1311 128 0 5 chr13 51859006 51859202 -68425110 + B2_Mm2 SINE B2 1 195 0 7 980 582 238 18 130 chr13 51859212 51859381 -68424931 + RSINE1 SINE B4 4 153 -12 7 980 227 226 0 36 chr13 51859870 51859925 -68424387 + MLT1A LTR MaLR 26 78 -330 7 980 426 319 55 69 chr13 51859910 51860211 -68424101 + MLT1A LTR MaLR 28 334 -40 7 980 237 65 0 0 chr13 51860680 51860711 -68423601 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 980 295 319 0 41 chr13 51860711 51860832 -68423480 - RMER12 LTR ERVK -471 851 736 7 980 181 305 59 59 chr13 51860983 51861084 -68423228 - MER5A DNA MER1_type -50 139 39 7 980 546 16 0 0 chr13 51861319 51861382 -68422930 + (TC)n Simple_repeat Simple_repeat 2 64 0 7 980 226 217 283 59 chr13 51861549 51861701 -68422611 + MER92B LTR ERV1 1 186 -450 7 980 683 273 143 19 chr13 51863066 51863324 -68420988 + B4 SINE B4 1 290 -2 7 980 338 91 0 18 chr13 51863334 51863390 -68420922 + (CA)n Simple_repeat Simple_repeat 1 55 0 7 980 369 0 0 0 chr13 51863760 51863801 -68420511 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 980 396 362 71 33 chr13 51864524 51864677 -68419635 + MER2 DNA MER2_type 97 264 -81 7 980 852 10 0 0 chr13 51864677 51864774 -68419538 + (GAAA)n Simple_repeat Simple_repeat 3 99 0 7 980 396 362 71 33 chr13 51864774 51864860 -68419452 + MER2 DNA MER2_type 265 345 0 7 980 348 320 134 28 chr13 51864933 51865187 -68419125 - B4A SINE B4 -7 285 5 7 980 514 210 137 4 chr13 51865734 51865888 -68418424 - B3A SINE B2 -8 185 5 7 980 203 119 0 67 chr13 51866374 51866419 -68417893 + (TA)n Simple_repeat Simple_repeat 1 42 0 7 980 1148 164 38 24 chr13 51866484 51866696 -68417616 - B3 SINE B2 -1 215 1 7 980 537 325 26 33 chr13 51866795 51867065 -68417247 - ID_B1 SINE B4 -13 279 3 7 980 233 347 129 28 chr13 51867700 51868056 -68416256 + L1MD LINE L1 3276 3667 -2479 7 980 344 77 0 19 chr13 51868268 51868321 -68415991 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 980 281 315 0 14 chr13 51868569 51868643 -68415669 - RSINE1 SINE B4 -88 77 5 7 980 270 81 0 0 chr13 51868874 51868911 -68415401 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 7 980 211 313 0 0 chr13 51868929 51868996 -68415316 + (CA)n Simple_repeat Simple_repeat 1 67 0 7 980 25 31 0 0 chr13 51868996 51869028 -68415284 + AT_rich Low_complexity Low_complexity 1 32 0 7 980 992 303 102 18 chr13 51869453 51869552 -68414760 + Tigger7 DNA MER2_type 36 147 -2344 7 980 339 25 0 0 chr13 51869552 51869592 -68414720 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 980 992 303 102 18 chr13 51869592 51869892 -68414420 + Tigger7 DNA MER2_type 148 468 -2023 7 980 576 157 18 18 chr13 51870029 51870198 -68414114 + (TCCA)n Simple_repeat Simple_repeat 3 171 0 7 980 285 301 17 42 chr13 51870245 51870363 -68413949 + Tigger7 DNA MER2_type 2328 2442 -49 7 980 249 319 41 31 chr13 51870486 51870583 -68413729 + B4A SINE B4 26 123 -169 7 980 246 205 36 0 chr13 51870745 51870828 -68413484 + (CA)n Simple_repeat Simple_repeat 1 86 0 7 980 2353 60 6 0 chr13 51871983 51872299 -68412013 - ORR1A2 LTR MaLR -9 318 1 7 980 266 297 56 28 chr13 51873700 51873842 -68410470 + (CATG)n Simple_repeat Simple_repeat 3 148 0 7 980 27 0 0 0 chr13 51874477 51874504 -68409808 + AT_rich Low_complexity Low_complexity 1 27 0 7 980 1035 227 130 68 chr13 51875275 51875574 -68408738 + MTE2b LTR MaLR 4 322 -57 7 980 1421 47 52 0 chr13 51875574 51875746 -68408566 - B2_Mm2 SINE B2 -14 181 1 7 980 1035 227 130 68 chr13 51875746 51875800 -68408512 + MTE2b LTR MaLR 323 379 0 7 980 301 297 34 107 chr13 51875803 51875980 -68408332 + B4 SINE B4 124 287 -5 7 980 274 274 78 26 chr13 51876308 51876424 -68407888 + B1F2 SINE Alu 9 130 -19 7 980 320 290 9 45 chr13 51876651 51876763 -68407549 - B3A SINE B2 0 198 91 7 980 2256 113 3 3 chr13 51876764 51877102 -68407210 - ORR1A1 LTR MaLR -8 338 1 7 980 351 186 90 34 chr13 51877102 51877190 -68407122 - B3A SINE B2 -97 101 9 7 980 479 283 14 0 chr13 51877552 51877690 -68406622 + B4A SINE B4 2 141 -151 7 980 3522 30 5 12 chr13 51878163 51878573 -68405739 - MTB_Mm LTR MaLR 0 407 1 7 980 22 35 0 0 chr13 51878599 51878628 -68405684 + AT_rich Low_complexity Low_complexity 1 29 0 7 980 525 254 25 25 chr13 51878646 51878767 -68405545 - RSINE1 SINE B4 -33 132 12 7 980 358 229 0 24 chr13 51878779 51878864 -68405448 - B4 SINE B4 -61 231 149 7 980 928 259 58 17 chr13 51879692 51879932 -68404380 + B4 SINE B4 1 250 -42 7 980 189 0 0 0 chr13 51880245 51880266 -68404046 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 7 980 333 62 0 0 chr13 51880266 51880313 -68403999 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 980 395 206 60 30 chr13 51880365 51880465 -68403847 - RSINE1 SINE B4 -59 106 4 7 980 340 326 118 0 chr13 51880767 51880911 -68403401 + L1M4 LINE L1 3414 3574 -2572 7 980 507 291 176 5 chr13 51880988 51881088 -68403224 + Tigger7 DNA MER2_type 11 121 -2370 7 980 1559 38 0 41 chr13 51881088 51881282 -68403030 + B2_Mm1a SINE B2 2 187 -6 7 980 507 291 176 5 chr13 51881282 51881402 -68402910 + Tigger7 DNA MER2_type 122 269 -2222 7 980 239 273 0 0 chr13 51881459 51881514 -68402798 - PB1D7 SINE Alu -48 72 18 7 980 603 289 69 76 chr13 51881476 51881779 -68402533 + MER44A DNA MER2_type 29 329 -10 7 980 217 235 235 0 chr13 51881819 51881904 -68402408 + PB1 SINE Alu 18 122 -5 7 980 631 226 135 24 chr13 51881945 51882257 -68402055 + MTD LTR MaLR 16 413 -8 7 980 504 203 154 0 chr13 51882359 51882482 -68401830 + B3A SINE B2 7 148 -50 7 980 470 287 41 14 chr13 51882536 51882681 -68401631 + B1F SINE Alu 1 149 0 7 980 386 321 130 0 chr13 51882699 51882847 -68401465 + L1M4 LINE L1 5165 5333 -813 7 980 716 140 152 23 chr13 51882847 51882979 -68401333 + B1_Mur4 SINE Alu 1 149 -1 7 980 386 321 130 0 chr13 51882979 51882992 -68401320 + L1M4 LINE L1 5334 5346 -800 7 980 360 0 0 0 chr13 51883181 51883221 -68401091 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 980 214 312 0 15 chr13 51883352 51883417 -68400895 + B4 SINE B4 1 64 -228 7 980 420 336 14 7 chr13 51883428 51883572 -68400740 + B4A SINE B4 122 266 -26 7 980 441 0 0 0 chr13 51883604 51883653 -68400659 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 980 301 241 58 35 chr13 51883737 51883823 -68400489 + L1M4b LINE L1 2177 2264 -5070 7 980 1081 322 77 33 chr13 51883842 51884475 -68399837 - L1MB5 LINE L1 -156 6018 5358 7 980 408 242 83 8 chr13 51884688 51884809 -68399503 + Tigger7 DNA MER2_type 1 130 -2361 7 980 373 349 70 14 chr13 51884807 51885022 -68399290 + Tigger7 DNA MER2_type 164 390 -2101 7 980 375 150 110 24 chr13 51886469 51886551 -68397761 + PB1D10 SINE Alu 1 89 -28 7 980 243 146 0 0 chr13 51886553 51886594 -68397718 + (GGGA)n Simple_repeat Simple_repeat 3 43 0 7 980 235 194 0 40 chr13 51889084 51889159 -68395153 + C-rich Low_complexity Low_complexity 3 74 0 7 980 363 292 0 73 chr13 51889187 51889379 -68394933 + C-rich Low_complexity Low_complexity 2 179 0 7 980 597 227 25 108 chr13 51889754 51889957 -68394355 + B4 SINE B4 55 240 -52 7 980 201 39 0 0 chr13 51889983 51890009 -68394303 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 980 519 322 42 77 chr13 51890366 51890442 -68393870 - CYRA11_Mm Unknown Y-chromosome -150 467 195 7 980 1254 161 0 35 chr13 51890442 51890673 -68393639 + URR1B DNA MER1_type 3 225 0 7 980 1077 69 0 0 chr13 51890798 51890943 -68393369 - B1_Mus2 SINE Alu -1 146 2 7 980 1042 62 0 0 chr13 51891801 51891931 -68392381 - B1_Mus1 SINE Alu -18 130 1 7 980 699 238 62 26 chr13 51891943 51892137 -68392175 - B3 SINE B2 -13 203 3 7 980 836 254 24 108 chr13 51892655 51892781 -68391531 - B4 SINE B4 0 292 177 7 980 327 104 0 0 chr13 51892781 51892829 -68391483 + (TCTG)n Simple_repeat Simple_repeat 2 49 0 7 980 836 254 24 108 chr13 51892829 51892989 -68391323 - B4 SINE B4 -116 176 30 7 980 416 280 87 0 chr13 51894305 51894455 -68389857 - Lx8 LINE L1 -341 7132 6970 7 980 1097 84 84 0 chr13 51894951 51895118 -68389194 + B2_Mm2 SINE B2 1 181 -14 7 980 219 114 250 0 chr13 51895154 51895198 -68389114 + B2_Mm2 SINE B2 47 101 -94 7 980 418 212 101 5 chr13 51895361 51895480 -68388832 + PB1D7 SINE Alu 12 148 0 7 980 567 247 84 0 chr13 51895771 51895949 -68388363 + B3A SINE B2 1 193 -5 7 980 534 306 68 72 chr13 51895994 51896230 -68388082 + B4 SINE B4 58 292 0 7 980 324 0 0 0 chr13 51896230 51896266 -68388046 + (TC)n Simple_repeat Simple_repeat 2 37 0 7 980 380 288 9 9 chr13 51896620 51896725 -68387587 + B4 SINE B4 3 107 -185 7 980 286 121 35 35 chr13 51896760 51896846 -68387466 + (TATATG)n Simple_repeat Simple_repeat 4 89 0 7 980 777 322 12 31 chr13 51896865 51896901 -68387411 - MT2A LTR ERVL -31 570 537 7 980 2222 78 52 0 chr13 51896901 51897209 -68387103 + ORR1A2 LTR MaLR 1 324 -3 7 980 459 0 0 0 chr13 51897209 51897260 -68387052 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 980 943 222 90 95 chr13 51897260 51897651 -68386661 - MT2A LTR ERVL -65 536 19 7 980 439 205 124 33 chr13 51897662 51897783 -68386529 + B4 SINE B4 97 228 -64 7 980 698 293 43 90 chr13 51897858 51898151 -68386161 - B4 SINE B4 -1 291 7 7 980 316 331 114 78 chr13 51898566 51898627 -68385685 - ORR1E LTR MaLR -11 348 291 7 980 558 43 0 0 chr13 51898627 51898696 -68385616 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 7 980 316 331 114 78 chr13 51898696 51898819 -68385493 - ORR1E LTR MaLR -69 290 169 7 980 279 0 0 0 chr13 51898819 51898850 -68385462 + (GA)n Simple_repeat Simple_repeat 1 31 0 7 980 316 331 114 78 chr13 51898850 51898870 -68385442 - ORR1E LTR MaLR -191 168 136 7 980 1371 213 31 67 chr13 51898870 51899258 -68385054 - ORR1D1 LTR MaLR 0 374 1 7 980 316 331 114 78 chr13 51899258 51899385 -68384927 - ORR1E LTR MaLR -224 135 3 7 980 307 109 0 0 chr13 51899647 51899693 -68384619 - HAL1-3A_ME LINE L1 -837 2021 1976 7 980 265 169 0 24 chr13 51899696 51899781 -68384531 + (TG)n Simple_repeat Simple_repeat 2 84 0 7 980 719 174 6 0 chr13 51899792 51899970 -68384342 + (TG)n Simple_repeat Simple_repeat 1 179 0 7 980 374 196 9 0 chr13 51899981 51900093 -68384219 + (TG)n Simple_repeat Simple_repeat 2 114 0 7 980 2347 155 14 33 chr13 51900111 51900205 -68384107 + MTC LTR MaLR 1 94 -327 7 980 1160 41 0 14 chr13 51900205 51900353 -68383959 + B1_Mm SINE Alu 2 147 0 7 980 2347 155 14 33 chr13 51900353 51900679 -68383633 + MTC LTR MaLR 95 413 -8 7 980 475 298 75 26 chr13 51900696 51900915 -68383397 - B4A SINE B4 -19 273 2 8 980 688 269 49 41 chr13 51900915 51901147 -68383165 - B4A SINE B4 -58 234 1 8 980 751 232 116 65 chr13 51901900 51901918 -68382394 - B4 SINE B4 -1 291 274 8 980 189 107 0 0 chr13 51901918 51901946 -68382366 + (CG)n Simple_repeat Simple_repeat 2 29 0 8 980 751 232 116 65 chr13 51901946 51902204 -68382108 - B4 SINE B4 -19 273 1 8 980 506 237 14 21 chr13 51902290 51902432 -68381880 - L1MA5 LINE L1 -24 6276 6136 8 980 518 289 26 26 chr13 51902434 51902590 -68381722 + B3A SINE B2 1 156 -42 8 980 24 0 0 0 chr13 51902653 51902677 -68381635 + AT_rich Low_complexity Low_complexity 1 24 0 8 980 355 212 25 0 chr13 51902772 51902852 -68381460 - PB1D10 SINE Alu -8 109 28 8 980 243 0 0 0 chr13 51902874 51902901 -68381411 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 980 316 271 24 0 chr13 51903208 51903293 -68381019 - RSINE1 SINE B4 -78 87 1 8 980 2103 197 60 65 chr13 51903515 51903984 -68380328 + RLTR20B1 LTR ERVK 1 470 -93 8 980 369 0 0 0 chr13 51903984 51904025 -68380287 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 980 2103 197 60 65 chr13 51904025 51904121 -68380191 + RLTR20B1 LTR ERVK 471 562 -1 8 981 1373 80 16 0 chr13 51904680 51904868 -68379444 + B2_Mm2 SINE B2 2 192 -3 8 981 207 0 0 0 chr13 51905308 51905331 -68378981 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 8 981 841 279 5 0 chr13 51905609 51905824 -68378488 - ID_B1 SINE B4 -7 217 2 8 981 512 268 8 0 chr13 51905875 51906002 -68378310 + Tigger5 DNA MER2_type 2155 2282 -124 8 981 1158 289 56 82 chr13 51906066 51906452 -68377860 - RMER5 LTR ERV1 -10 524 123 8 981 1195 64 34 34 chr13 51906452 51906630 -68377682 + B2_Mm2 SINE B2 2 179 -16 8 981 1158 289 56 82 chr13 51906630 51906781 -68377531 - RMER5 LTR ERV1 -412 122 1 8 981 2219 163 89 27 chr13 51906862 51907396 -68376916 - RLTR31_Mm LTR ERVK 0 561 1 8 981 497 229 16 16 chr13 51907839 51907963 -68376349 - MTD LTR MaLR -14 405 282 8 981 486 304 30 78 chr13 51908014 51908246 -68376066 - MTD LTR MaLR -149 270 50 8 981 526 306 28 0 chr13 51908333 51908477 -68375835 + B1F2 SINE Alu 2 149 0 8 981 587 298 66 0 chr13 51908767 51908948 -68375364 + MER2 DNA MER2_type 88 280 -65 8 981 631 307 27 51 chr13 51910344 51910636 -68373676 - B4A SINE B4 -7 285 1 8 981 648 288 28 0 chr13 51910695 51910872 -68373440 - B3A SINE B2 -16 182 1 8 981 380 231 0 71 chr13 51910903 51910927 -68373385 - PB1 SINE Alu -15 112 92 8 981 2200 77 3 107 chr13 51910927 51910986 -68373326 - ORR1A2 LTR MaLR 0 327 287 8 981 919 69 108 0 chr13 51910986 51911116 -68373196 - B1_Mus1 SINE Alu 0 148 5 8 981 2200 77 3 107 chr13 51911116 51911421 -68372891 - ORR1A2 LTR MaLR -41 286 1 8 981 380 231 0 71 chr13 51911421 51911494 -68372818 - PB1 SINE Alu -36 91 22 8 981 521 167 8 0 chr13 51912950 51913076 -68371236 + (TCTG)n Simple_repeat Simple_repeat 4 130 0 8 981 497 298 6 56 chr13 51913131 51913291 -68371021 - B4 SINE B4 -140 152 1 8 981 396 0 0 0 chr13 51913846 51913890 -68370422 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 981 249 322 23 90 chr13 51914598 51914625 -68369687 + B1_Mur1 SINE Alu 26 149 0 8 981 488 190 9 57 chr13 51914625 51914731 -68369581 + ID_B1 SINE B4 124 224 0 8 981 969 66 0 0 chr13 51915448 51915584 -68368728 - B1_Mus2 SINE Alu 0 147 12 8 981 489 215 47 94 chr13 51915451 51915600 -68368712 - B4 SINE B4 -69 223 82 8 981 366 221 100 93 chr13 51915483 51915623 -68368689 - MT2B LTR ERVL -337 264 124 8 981 275 328 116 8 chr13 51916005 51916134 -68368178 - MER63D DNA AcHobo -681 380 238 8 981 432 0 0 0 chr13 51916136 51916184 -68368128 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 981 590 264 49 6 chr13 51916198 51916362 -68367950 - B3A SINE B2 -27 171 1 8 981 283 134 45 0 chr13 51916384 51916451 -68367861 + CT-rich Low_complexity Low_complexity 3 72 0 8 981 861 196 7 0 chr13 51916575 51916728 -68367584 - RSINE1 SINE B4 -10 155 2 8 981 1024 213 45 0 chr13 51916759 51916961 -68367351 - B3 SINE B2 -5 211 1 8 981 437 261 100 0 chr13 51916967 51917097 -68367215 - MER63D DNA AcHobo -911 150 8 8 981 717 238 75 19 chr13 51917252 51917458 -68366854 + B4A SINE B4 7 224 -68 8 981 762 239 49 19 chr13 51917458 51917585 -68366727 + B3 SINE B2 3 135 -81 8 981 2230 93 2 105 chr13 51917585 51918042 -68366270 + RMER17C LTR ERVK 1 410 0 8 981 762 239 49 19 chr13 51918042 51918119 -68366193 + B3 SINE B2 136 213 -3 8 981 524 240 6 0 chr13 51918221 51918400 -68365912 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 981 500 287 152 32 chr13 51918931 51919208 -68365104 - RMER15 LTR ERVL -2 573 264 8 981 207 0 0 0 chr13 51919741 51919764 -68364548 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 8 981 482 225 0 0 chr13 51920129 51920218 -68364094 + B3A SINE B2 82 170 -28 8 981 249 119 0 0 chr13 51920246 51920288 -68364024 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 981 437 249 124 26 chr13 51920887 51921081 -68363231 + B3 SINE B2 2 214 -2 8 981 873 88 71 21 chr13 51921729 51921869 -68362443 + B1_Mus1 SINE Alu 2 148 0 8 981 230 308 56 37 chr13 51922011 51922109 -68362203 + ORR1E LTR MaLR 3 102 -257 8 981 826 206 52 16 chr13 51922109 51922301 -68362011 - URR1A DNA MER1_type 0 226 28 8 981 574 196 86 20 chr13 51922303 51922454 -68361858 + ORR1E LTR MaLR 95 255 -104 8 981 264 91 0 0 chr13 51922494 51922538 -68361774 + (T)n Simple_repeat Simple_repeat 1 44 0 8 981 808 184 0 0 chr13 51922538 51922685 -68361627 - B1_Mus1 SINE Alu 0 148 2 8 981 622 209 0 0 chr13 51922839 51922954 -68361358 + PB1D7 SINE Alu 1 115 -5 8 981 529 243 65 7 chr13 51922955 51923108 -68361204 - B4A SINE B4 -67 225 64 8 981 813 182 32 0 chr13 51923220 51923415 -68360897 + B2_Mm2 SINE B2 3 215 -1 8 981 1155 54 0 0 chr13 51923418 51923565 -68360747 + B1_Mus1 SINE Alu 2 148 0 8 981 1478 67 0 5 chr13 51923695 51923891 -68360421 + B2_Mm2 SINE B2 1 195 0 8 981 519 95 0 0 chr13 51923895 51923969 -68360343 + (GAAAA)n Simple_repeat Simple_repeat 3 76 0 8 981 243 0 0 0 chr13 51924601 51924628 -68359684 + (A)n Simple_repeat Simple_repeat 1 27 0 8 981 1140 41 0 26 chr13 51924633 51924784 -68359528 + B1_Mm SINE Alu 1 147 0 8 981 444 37 0 0 chr13 51925053 51925107 -68359205 + (TC)n Simple_repeat Simple_repeat 1 54 0 8 981 729 34 0 0 chr13 51925108 51925196 -68359116 + (TTC)n Simple_repeat Simple_repeat 1 88 0 8 981 960 62 0 0 chr13 51925198 51925326 -68358986 - B1_Mus1 SINE Alu -19 129 2 8 981 575 234 0 0 chr13 51925386 51925510 -68358802 - RSINE1 SINE B4 -34 131 8 8 981 324 305 11 0 chr13 51925748 51925843 -68358469 + RSINE1 SINE B4 11 106 -59 8 981 445 282 0 0 chr13 51926029 51926146 -68358166 - PB1D7 SINE Alu 0 120 4 8 981 557 280 102 0 chr13 51926649 51926835 -68357477 - B4A SINE B4 -86 206 2 8 981 1028 266 44 0 chr13 51927422 51927696 -68356616 + B4A SINE B4 7 292 0 8 981 972 244 21 146 chr13 51927809 51928241 -68356071 - MTE2a LTR MaLR 0 379 2 8 981 1101 58 0 0 chr13 51929445 51929583 -68354729 - B1_Mus2 SINE Alu -8 139 2 8 981 399 70 0 53 chr13 51929890 51929965 -68354347 + (TCC)n Simple_repeat Simple_repeat 3 73 0 8 981 230 0 0 32 chr13 51930256 51930287 -68354025 + (TGGGGG)n Simple_repeat Simple_repeat 6 35 0 8 981 345 294 27 96 chr13 51930360 51930548 -68353764 - MTEa LTR MaLR -2 377 203 8 981 4398 67 7 3 chr13 51930588 51931170 -68353142 - MT2B2 LTR ERVL 0 584 1 8 981 1420 62 10 10 chr13 51931653 51931848 -68352464 + B2_Mm2 SINE B2 1 195 0 8 981 298 269 14 7 chr13 51932704 51932798 -68351514 - B4A SINE B4 -70 95 3 8 981 367 291 81 16 chr13 51933053 51933231 -68351081 + L1MA4 LINE L1 5698 5927 -373 8 981 1901 200 11 3 chr13 51933403 51933774 -68350538 - RLTR14 LTR ERV1 0 382 9 8 981 316 309 262 7 chr13 51933867 51934090 -68350222 + B4A SINE B4 3 281 -11 8 981 1631 133 121 6 chr13 51934125 51934489 -68349823 + RMER17C LTR ERVK 5 410 0 8 981 228 277 35 35 chr13 51934575 51934661 -68349651 - MER5A1 DNA MER1_type -50 116 31 8 981 364 315 70 8 chr13 51934966 51935094 -68349218 - B4A SINE B4 -151 141 6 8 981 267 238 314 0 chr13 51935486 51935591 -68348721 + MIRb SINE MIR 105 242 -26 8 981 318 222 239 0 chr13 51935795 51935912 -68348400 - ID_B1 SINE B4 0 224 80 8 981 221 152 22 0 chr13 51936717 51936763 -68347549 + ID4 SINE ID 1 47 -36 8 981 204 222 0 0 chr13 51936894 51936939 -68347373 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 981 856 256 49 49 chr13 51936947 51937210 -68347102 - B4 SINE B4 0 292 30 8 981 238 285 78 72 chr13 51938678 51938871 -68345441 - RLTR25A LTR ERVK -392 711 518 8 981 278 224 84 20 chr13 51939025 51939124 -68345188 - PB1 SINE Alu -6 114 21 8 981 377 56 0 0 chr13 51939883 51939937 -68344375 + B1_Mus1 SINE Alu 2 55 -93 8 981 238 188 112 56 chr13 51939982 51940089 -68344223 + RLTR25B LTR ERVK 397 509 -519 8 981 614 68 68 0 chr13 51940026 51940114 -68344198 + B1_Mus2 SINE Alu 42 135 -12 8 981 689 0 12 0 chr13 51940377 51940458 -68343854 + (TC)n Simple_repeat Simple_repeat 2 83 0 8 981 411 78 0 0 chr13 51940458 51940521 -68343791 + (TG)n Simple_repeat Simple_repeat 1 64 0 8 981 294 73 0 0 chr13 51941656 51941697 -68342615 + (A)n Simple_repeat Simple_repeat 1 41 0 8 981 21 0 0 0 chr13 51943213 51943234 -68341078 + AT_rich Low_complexity Low_complexity 1 21 0 8 981 618 284 13 1 chr13 51945458 51945609 -68338703 - ID_B1 SINE B4 -71 221 54 8 981 24 53 0 0 chr13 51945912 51945950 -68338362 + AT_rich Low_complexity Low_complexity 1 38 0 9 981 792 264 67 38 chr13 51946211 51946451 -68337861 + B4 SINE B4 1 247 -45 9 981 385 269 9 103 chr13 51946666 51946782 -68337530 + RSINE1 SINE B4 3 107 -58 9 981 201 74 0 0 chr13 51947982 51948009 -68336303 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 9 981 468 0 0 0 chr13 51948573 51948625 -68335687 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 981 231 377 35 21 chr13 51950208 51950349 -68333963 + MLT1E2 LTR MaLR 306 448 -179 9 981 432 0 0 0 chr13 51950451 51950499 -68333813 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 981 635 299 19 25 chr13 51950502 51950663 -68333649 - B3A SINE B2 -38 160 1 9 981 413 260 121 8 chr13 51951031 51951155 -68333157 - MTC LTR MaLR -1 420 283 9 981 231 225 179 63 chr13 51951213 51951308 -68333004 - MTC LTR MaLR -145 274 169 9 981 914 164 129 26 chr13 51951330 51951524 -68332788 - URR1A DNA MER1_type -12 214 1 9 981 225 0 0 0 chr13 51951638 51951663 -68332649 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 981 438 36 0 0 chr13 51951664 51951720 -68332592 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 981 1022 29 15 4 chr13 51951803 51951933 -68332379 + B1_Mm SINE Alu 22 147 0 9 981 335 312 44 9 chr13 51951935 51952048 -68332264 + L1MD LINE L1 3074 3190 -2956 9 981 576 240 71 22 chr13 51952053 51952236 -68332076 - Tigger7 DNA MER2_type -29 2462 2271 9 981 195 42 0 0 chr13 51953102 51953126 -68331186 + (TTA)n Simple_repeat Simple_repeat 1 24 0 9 981 326 317 97 58 chr13 51953498 51953511 -68330801 - B3A SINE B2 -1 197 181 9 981 360 0 0 0 chr13 51953511 51953551 -68330761 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 981 326 317 97 58 chr13 51953551 51953691 -68330621 - B3A SINE B2 -18 180 39 9 981 456 244 125 23 chr13 51953710 51953886 -68330426 - B3A SINE B2 -4 194 1 9 981 317 284 36 50 chr13 51954275 51954479 -68329833 + MLT1A1 LTR MaLR 1 206 -202 9 981 462 309 20 87 chr13 51954474 51954669 -68329643 - B4A SINE B4 0 292 111 9 981 491 237 8 58 chr13 51954550 51954671 -68329641 - B1_Mur2 SINE Alu -11 138 24 9 981 437 234 64 18 chr13 51954693 51954802 -68329510 - B4A SINE B4 -56 236 123 9 981 1028 185 12 98 chr13 51955421 51955667 -68328645 - URR1A DNA MER1_type 0 226 2 9 981 859 268 71 85 chr13 51955856 51955915 -68328397 + ORR1E LTR MaLR 35 82 -277 9 981 1267 99 0 6 chr13 51955915 51956088 -68328224 - B2_Mm2 SINE B2 -19 176 5 9 981 859 268 71 85 chr13 51956088 51956322 -68327990 + ORR1E LTR MaLR 83 324 -35 9 981 614 278 93 16 chr13 51956428 51956622 -68327690 + MLT1A1 LTR MaLR 186 394 -14 9 981 373 73 0 18 chr13 51957141 51957197 -68327115 - B1_Mur4 SINE Alu 0 150 96 9 981 1153 75 0 0 chr13 51957216 51957363 -68326949 - B1_Mus2 SINE Alu 0 147 1 9 981 2841 172 36 181 chr13 51957363 51958135 -68326177 - RMER19B LTR ERVK -17 885 225 9 981 1670 171 88 32 chr13 51958160 51958574 -68325738 + RMER16 LTR ERVK 7 533 0 9 981 514 246 4 14 chr13 51958584 51958759 -68325553 - RMER19B LTR ERVK -342 269 1 9 981 1619 234 30 6 chr13 51959130 51959491 -68324821 - MTEb LTR MaLR -1 378 9 9 981 361 280 105 20 chr13 51959573 51959726 -68324586 + L1MA4 LINE L1 5124 5289 -854 9 981 320 248 49 16 chr13 51959825 51959948 -68324364 + L1MA4 LINE L1 5299 5425 -746 9 981 804 272 6 0 chr13 51959957 51960130 -68324182 + B3A SINE B2 2 175 -23 9 981 726 308 54 38 chr13 51960137 51960583 -68323729 + L1MA4 LINE L1 5449 5901 -399 9 981 282 148 0 0 chr13 51960592 51960646 -68323666 + (TATG)n Simple_repeat Simple_repeat 3 56 0 9 981 235 237 34 0 chr13 51960672 51960731 -68323581 - RLTR15 LTR ERVK -298 61 1 9 981 339 286 103 24 chr13 51960731 51961021 -68323291 + L1MA4 LINE L1 5975 6287 -13 9 981 638 226 167 40 chr13 51962266 51962464 -68321848 - ID_B1 SINE B4 0 224 2 9 981 21 0 0 0 chr13 51962812 51962833 -68321479 + AT_rich Low_complexity Low_complexity 1 21 0 9 981 597 241 7 107 chr13 51962921 51963070 -68321242 + RSINE1 SINE B4 4 137 -28 9 981 210 37 0 0 chr13 51963246 51963273 -68321039 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 9 981 885 98 89 0 chr13 51963273 51963396 -68320916 - B1_Mus2 SINE Alu -11 136 3 9 981 256 62 0 0 chr13 51963436 51963468 -68320844 + (GA)n Simple_repeat Simple_repeat 1 32 0 9 981 429 70 0 0 chr13 51963468 51963525 -68320787 + (GGA)n Simple_repeat Simple_repeat 2 58 0 9 981 2086 123 8 74 chr13 51966008 51966360 -68317952 - ORR1A4 LTR MaLR 0 329 1 9 981 1360 41 18 0 chr13 51967136 51967307 -68317005 - B2_Mm1a SINE B2 -5 188 15 9 981 546 207 133 0 chr13 51969675 51969810 -68314502 + MTEa LTR MaLR 1 153 -226 9 981 250 239 722 0 chr13 51969980 51970095 -68314217 + RMER30 DNA MER1_type 1 198 -4 9 981 298 329 134 30 chr13 51970216 51970448 -68313864 + MLT1B LTR MaLR 54 309 -158 9 981 331 242 16 0 chr13 51971077 51971139 -68313173 + PB1D9 SINE Alu 1 63 -57 9 981 969 71 0 0 chr13 51971152 51971278 -68313034 + B1_Mus2 SINE Alu 1 126 -21 9 981 807 212 0 128 chr13 51972300 51972527 -68311785 - B3A SINE B2 0 198 1 9 981 480 307 0 0 chr13 51972801 51972915 -68311397 + B4 SINE B4 6 119 -173 9 981 6613 76 54 2 chr13 51973102 51974008 -68310304 + Lx2 LINE L1 6044 6996 -1 9 981 245 285 43 35 chr13 51975024 51975151 -68309161 - ORR1E LTR MaLR -163 196 67 9 981 1196 240 78 43 chr13 51978290 51978638 -68305674 - MTE2a LTR MaLR 0 379 20 9 981 596 189 19 7 chr13 51980259 51980413 -68303899 + (CA)n Simple_repeat Simple_repeat 2 157 0 9 981 366 78 20 0 chr13 51980416 51980467 -68303845 + HAL1-3A_ME LINE L1 1976 2027 -831 9 981 1547 22 17 6 chr13 51980556 51980735 -68303577 + B2_Mm2 SINE B2 1 181 -14 9 981 306 236 13 0 chr13 51981427 51981492 -68302820 + PB1D10 SINE Alu 1 71 -49 9 981 343 222 144 0 chr13 51982914 51983004 -68301308 - MLT1A1 LTR MaLR -2 406 304 9 981 1142 303 74 53 chr13 51984768 51984975 -68299337 - L1_Mur3 LINE L1 -1766 4114 3883 9 981 462 18 0 0 chr13 51984975 51985030 -68299282 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 9 981 1142 303 74 53 chr13 51985030 51985132 -68299180 - L1_Mur3 LINE L1 -1998 3882 3779 9 981 885 19 0 0 chr13 51985132 51985235 -68299077 + (CAAAC)n Simple_repeat Simple_repeat 2 104 0 9 981 1142 303 74 53 chr13 51985235 51985886 -68298426 - L1_Mur3 LINE L1 -2102 3778 3135 9 981 867 187 0 0 chr13 51986287 51986458 -68297854 + CT-rich Low_complexity Low_complexity 3 173 0 9 981 654 13 0 0 chr13 51986481 51986556 -68297756 + (TTTC)n Simple_repeat Simple_repeat 3 77 0 9 981 1209 61 7 0 chr13 51986556 51986703 -68297609 - B1_Mus1 SINE Alu 0 148 1 9 981 1524 219 76 14 chr13 51986772 51987128 -68297184 - MTE2b LTR MaLR 0 379 2 9 981 602 109 10 0 chr13 51988745 51988846 -68295466 + (TATG)n Simple_repeat Simple_repeat 4 105 0 9 981 231 304 107 0 chr13 51989013 51989125 -68295187 - MLT1G3 LTR MaLR -2 593 470 9 981 377 318 25 60 chr13 51989820 51990021 -68294291 + HAL1 LINE L1 1010 1203 -1304 9 981 945 246 0 20 chr13 51990894 51991093 -68293219 - B3A SINE B2 -1 197 3 9 981 663 13 0 0 chr13 51991296 51991372 -68292940 + (CA)n Simple_repeat Simple_repeat 2 77 0 9 981 233 241 35 0 chr13 51991448 51991506 -68292806 - B3A SINE B2 -3 195 136 9 981 639 320 56 45 chr13 51991477 51991686 -68292626 - B4A SINE B4 0 292 76 9 981 3347 134 15 6 chr13 51991686 51992205 -68292107 + RLTR28 LTR ERVL 1 524 0 9 981 639 320 56 45 chr13 51992205 51992283 -68292029 - B4A SINE B4 -217 75 2 9 981 232 378 28 14 chr13 51992283 51992428 -68291884 - L1M5 LINE L1 -467 5657 5511 9 981 373 341 29 36 chr13 51992784 51992921 -68291391 - ID_B1 SINE B4 -87 137 2 9 981 2201 116 3 6 chr13 51994164 51994476 -68289836 + RLTR10E LTR ERVK 1 311 0 9 981 396 0 0 0 chr13 51995090 51995134 -68289178 + (CA)n Simple_repeat Simple_repeat 1 44 0 9 981 180 34 67 33 chr13 51995242 51995272 -68289040 - L3 LINE CR1 -3708 781 751 9 981 181 57 0 54 chr13 51995493 51995530 -68288782 + (TTTTTG)n Simple_repeat Simple_repeat 4 38 0 9 981 396 0 0 0 chr13 51995929 51995973 -68288339 + (TC)n Simple_repeat Simple_repeat 2 45 0 9 981 824 235 5 32 chr13 51995976 51996165 -68288147 - B4 SINE B4 -98 194 11 9 981 440 227 88 29 chr13 51996469 51996605 -68287707 - Tigger7 DNA MER2_type -105 2386 2243 9 981 924 156 21 7 chr13 51996607 51996749 -68287563 + B1_Mur4 SINE Alu 1 144 -6 9 981 342 0 0 0 chr13 51996751 51996789 -68287523 + (TTA)n Simple_repeat Simple_repeat 2 39 0 9 981 773 75 0 36 chr13 51996790 51996900 -68287412 - B2_Mm2 SINE B2 -88 107 2 9 981 1057 272 6 76 chr13 51996978 51997292 -68287020 + B4 SINE B4 1 292 0 9 981 191 88 29 0 chr13 51997296 51997330 -68286982 + (CA)n Simple_repeat Simple_repeat 1 35 0 9 981 219 103 0 0 chr13 51997689 51997728 -68286584 + (A)n Simple_repeat Simple_repeat 1 39 0 9 981 315 0 0 0 chr13 51998628 51998663 -68285649 + (TC)n Simple_repeat Simple_repeat 1 35 0 9 981 540 81 0 0 chr13 51998663 51998736 -68285576 + (CA)n Simple_repeat Simple_repeat 1 74 0 9 981 242 0 61 0 chr13 51999587 51999620 -68284692 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 9 981 702 233 59 45 chr13 51999622 51999842 -68284470 - ID_B1 SINE B4 0 224 2 9 981 218 273 32 16 chr13 52000348 52000435 -68283877 + MIRm SINE MIR 35 127 -149 1 981 351 44 0 0 chr13 52001013 52001058 -68283254 + (CAAG)n Simple_repeat Simple_repeat 3 47 0 2 981 303 319 125 42 chr13 52002511 52002655 -68281657 + B4 SINE B4 1 156 -136 3 981 411 264 190 0 chr13 52002692 52002813 -68281499 + RSINE1 SINE B4 2 145 -20 4 981 222 37 0 0 chr13 52002814 52002841 -68281471 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 5 981 378 162 0 0 chr13 52002932 52003006 -68281306 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 981 234 337 9 65 chr13 52003238 52003346 -68280966 + MLT1A1 LTR MaLR 15 116 -258 7 981 236 349 101 23 chr13 52003433 52003562 -68280750 + MLT1A1 LTR MaLR 268 406 -2 7 981 238 314 89 47 chr13 52004676 52004880 -68279432 - MLT1A1 LTR MaLR -7 460 270 8 981 351 216 16 16 chr13 52005007 52005134 -68279178 + (TCCA)n Simple_repeat Simple_repeat 3 129 0 9 981 1546 27 0 16 chr13 52005440 52005629 -68278683 + B2_Mm1a SINE B2 1 186 -7 1 981 978 21 41 0 chr13 52006192 52006337 -68277975 + (TCCA)n Simple_repeat Simple_repeat 4 154 0 1 981 263 345 231 4 chr13 52007939 52008207 -68276105 - MER46C DNA MER2_type -9 329 1 1 981 200 392 0 14 chr13 52008296 52008441 -68275871 + (TG)n Simple_repeat Simple_repeat 2 144 0 1 981 246 282 22 45 chr13 52009058 52009147 -68275165 + MamGypLTR1a LTR Gypsy 654 740 -44 1 981 375 23 0 0 chr13 52009406 52009450 -68274862 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 1 981 411 305 101 47 chr13 52009473 52009731 -68274581 - B4 SINE B4 -18 274 3 1 981 200 188 0 0 chr13 52009748 52009780 -68274532 + polypurine Low_complexity Low_complexity 3 34 0 1 981 1347 72 0 0 chr13 52009782 52009962 -68274350 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 1 981 1287 211 50 29 chr13 52009963 52010138 -68274174 - RMER17C LTR ERVK -22 388 215 1 981 1129 72 0 22 chr13 52010138 52010322 -68273990 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 981 1287 211 50 29 chr13 52010322 52010526 -68273786 - RMER17C LTR ERVK -196 214 2 1 981 333 140 0 0 chr13 52010750 52010807 -68273505 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 981 267 303 22 0 chr13 52011230 52011319 -68272993 + (ATGGTG)n Simple_repeat Simple_repeat 4 94 0 2 981 864 188 82 11 chr13 52011319 52011502 -68272810 - RMER13A LTR ERVK 0 860 665 2 981 739 261 26 151 chr13 52011529 52011823 -68272489 - MTD LTR MaLR -146 261 5 2 981 183 42 0 0 chr13 52012860 52012884 -68271428 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 2 981 800 226 33 24 chr13 52014686 52014899 -68269413 + ID_B1 SINE B4 1 215 -9 2 981 228 163 0 0 chr13 52015951 52015994 -68268318 + GA-rich Low_complexity Low_complexity 1 43 0 2 981 337 203 0 0 chr13 52017545 52017609 -68266703 - ID4 SINE ID 0 83 20 2 981 330 310 54 0 chr13 52017622 52017751 -68266561 - MER2 DNA MER2_type -118 227 92 2 981 673 276 66 11 chr13 52017785 52017800 -68266512 - B3A SINE B2 -5 193 179 3 981 351 0 0 0 chr13 52017800 52017839 -68266473 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 981 673 276 66 11 chr13 52017839 52018006 -68266306 - B3A SINE B2 -20 178 1 3 981 476 226 19 0 chr13 52018047 52018153 -68266159 + L1MC4 LINE L1 7918 8025 -17 3 981 372 22 0 0 chr13 52018162 52018207 -68266105 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 981 778 262 87 36 chr13 52018535 52018812 -68265500 - B4 SINE B4 -1 291 1 3 981 703 189 0 0 chr13 52020072 52020194 -68264118 - B1_Mur2 SINE Alu -18 131 10 3 981 1091 63 14 0 chr13 52020194 52020337 -68263975 + B1_Mus1 SINE Alu 3 147 -1 3 981 460 29 59 0 chr13 52020337 52020405 -68263907 + (TAAA)n Simple_repeat Simple_repeat 2 73 0 3 981 732 272 148 11 chr13 52020492 52020763 -68263549 - MTE2a LTR MaLR -9 370 63 3 981 578 300 133 0 chr13 52020980 52021280 -68263032 + L1MA8 LINE L1 5809 6148 -143 3 981 386 16 63 0 chr13 52021302 52021365 -68262947 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 981 1154 256 11 8 chr13 52021384 52021652 -68262660 - B4A SINE B4 -23 269 1 4 981 553 271 0 50 chr13 52021821 52021961 -68262351 - RSINE1 SINE B4 -29 136 4 4 981 23 54 0 0 chr13 52021975 52022012 -68262300 + AT_rich Low_complexity Low_complexity 1 37 0 4 981 218 279 36 48 chr13 52022654 52022737 -68261575 + PB1 SINE Alu 44 125 -2 4 981 313 261 49 42 chr13 52022749 52022893 -68261419 + B1F SINE Alu 5 149 0 4 981 369 0 0 0 chr13 52023695 52023736 -68260576 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 981 492 18 0 0 chr13 52023870 52023927 -68260385 + (TC)n Simple_repeat Simple_repeat 1 57 0 4 981 200 200 0 0 chr13 52025154 52025189 -68259123 + T-rich Low_complexity Low_complexity 2 36 0 4 981 299 0 78 0 chr13 52025476 52025527 -68258785 + (CAAAA)n Simple_repeat Simple_repeat 2 56 0 4 981 227 297 75 32 chr13 52025800 52025894 -68258418 - L4 LINE RTE -709 1320 1223 5 981 393 279 26 18 chr13 52027779 52027892 -68256420 + MTEb LTR MaLR 265 378 -1 5 981 876 143 173 11 chr13 52028341 52028532 -68255780 + URR1B DNA MER1_type 1 222 -3 5 981 24 0 0 0 chr13 52028698 52028722 -68255590 + AT_rich Low_complexity Low_complexity 1 24 0 5 981 412 267 20 0 chr13 52029753 52029854 -68254458 - PB1D9 SINE Alu -17 103 1 5 981 251 275 88 40 chr13 52029897 52030022 -68254290 - YREP_Mm Unknown Unknown -1455 357 227 5 981 470 198 144 0 chr13 52029953 52030064 -68254248 + ID_B1 SINE B4 98 224 0 5 981 369 0 0 0 chr13 52030074 52030115 -68254197 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 5 981 337 297 177 15 chr13 52030134 52030264 -68254048 + RSINE1 SINE B4 15 165 0 5 981 355 291 25 33 chr13 52030423 52030544 -68253768 - MLT1A1 LTR MaLR -19 389 270 5 981 722 191 8 0 chr13 52030601 52030727 -68253585 - B1_Mus2 SINE Alu -19 128 2 6 981 216 0 0 0 chr13 52031071 52031095 -68253217 + (T)n Simple_repeat Simple_repeat 1 24 0 6 981 1027 95 7 0 chr13 52031095 52031242 -68253070 - B1_Mus1 SINE Alu 0 148 1 6 981 439 191 32 0 chr13 52032270 52032363 -68251949 + B4A SINE B4 1 96 -196 6 981 527 337 19 4 chr13 52032363 52032578 -68251734 + B3A SINE B2 1 216 0 6 981 464 242 10 10 chr13 52032704 52032804 -68251508 + B4A SINE B4 185 284 -8 6 981 370 388 55 28 chr13 52032815 52032862 -68251450 + L1M5 LINE L1 4832 4878 -1268 6 981 270 0 0 0 chr13 52032862 52032892 -68251420 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 981 370 388 55 28 chr13 52032892 52033133 -68251179 + L1M5 LINE L1 4879 5128 -1018 6 981 244 309 0 36 chr13 52033658 52033742 -68250570 + ID4 SINE ID 2 82 -1 6 981 222 91 0 0 chr13 52034178 52034211 -68250101 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 981 898 251 36 40 chr13 52034247 52034496 -68249816 - B4A SINE B4 0 292 45 6 981 768 324 52 9 chr13 52034661 52035004 -68249308 - MLT1A0 LTR MaLR -7 358 1 7 122 576 284 0 0 chr13 52035568 52035709 -68248603 - ID_B1 SINE B4 -1 223 83 7 982 204 200 0 0 chr13 52035774 52035824 -68248488 + CT-rich Low_complexity Low_complexity 4 53 0 7 982 387 0 0 0 chr13 52036057 52036100 -68248212 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 982 243 0 0 0 chr13 52036100 52036126 -68248186 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 982 381 273 14 50 chr13 52036140 52036279 -68248033 - B4 SINE B4 -40 252 119 7 982 2815 67 0 0 chr13 52036262 52036633 -68247679 - MT2B2 LTR ERVL -8 576 206 7 982 333 195 51 13 chr13 52036566 52036644 -68247668 - RLTR25B LTR ERVK -510 518 438 7 982 727 293 22 58 chr13 52036941 52037245 -68247067 + B4A SINE B4 1 290 -2 7 982 287 303 0 26 chr13 52037302 52037380 -68246932 + B4A SINE B4 217 292 0 7 982 201 74 0 0 chr13 52038459 52038486 -68245826 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 7 982 585 351 7 25 chr13 52038935 52039210 -68245102 + B4A SINE B4 5 274 -18 8 982 940 194 40 45 chr13 52039889 52040089 -68244223 - B3 SINE B2 -17 199 1 8 982 243 219 10 20 chr13 52040384 52040482 -68243830 + (TG)n Simple_repeat Simple_repeat 2 98 0 8 982 492 179 25 13 chr13 52040569 52040727 -68243585 + (TG)n Simple_repeat Simple_repeat 1 160 0 8 982 760 255 5 52 chr13 52040729 52040940 -68243372 - B4 SINE B4 0 292 92 8 982 344 266 13 0 chr13 52041007 52041086 -68243226 - B3A SINE B2 -118 80 1 8 982 320 292 52 10 chr13 52041086 52041176 -68243136 - B4 SINE B4 -197 95 2 8 982 393 22 0 0 chr13 52041501 52041547 -68242765 + (CAGT)n Simple_repeat Simple_repeat 1 46 0 8 982 724 270 73 0 chr13 52042064 52042268 -68242044 - B4A SINE B4 -72 220 2 8 982 251 292 88 9 chr13 52042274 52042388 -68241924 - MLT1C LTR MaLR -292 175 53 8 982 220 371 7 7 chr13 52043521 52043665 -68240647 + (CA)n Simple_repeat Simple_repeat 1 144 0 8 982 240 331 23 15 chr13 52043705 52043837 -68240475 + (CATA)n Simple_repeat Simple_repeat 1 133 0 9 982 510 83 0 0 chr13 52043840 52043912 -68240400 + (CA)n Simple_repeat Simple_repeat 1 72 0 9 982 2447 68 9 0 chr13 52044075 52044399 -68239913 + ORR1A2 LTR MaLR 1 327 0 9 982 276 280 82 57 chr13 52045117 52045276 -68239036 + YREP_Mm Unknown Unknown 126 288 -1524 9 982 627 221 0 35 chr13 52045162 52045307 -68239005 - ID_B1 SINE B4 -6 218 79 9 982 295 280 138 60 chr13 52045437 52045604 -68238708 - MLT1F2 LTR MaLR -17 543 364 9 982 346 309 42 109 chr13 52045616 52045899 -68238413 - ORR1E LTR MaLR -29 330 67 9 982 250 221 118 0 chr13 52046105 52046173 -68238139 - MLT1F2 LTR MaLR -100 265 190 9 982 333 0 0 0 chr13 52046393 52046430 -68237882 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 982 435 351 20 0 chr13 52046431 52046579 -68237733 - RSINE1 SINE B4 -14 151 1 9 982 674 249 124 0 chr13 52046661 52046838 -68237474 + ID_B1 SINE B4 6 204 -20 9 982 555 201 0 0 chr13 52046857 52046996 -68237316 + GA-rich Low_complexity Low_complexity 1 139 0 1 982 793 287 28 43 chr13 52047077 52047332 -68236980 - MLT1F2-int LTR MaLR -580 909 659 9 982 378 0 0 0 chr13 52047412 52047454 -68236858 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 982 282 29 0 0 chr13 52047878 52047913 -68236399 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 982 2677 77 20 3 chr13 52050243 52050633 -68233679 - BGLII_Mus LTR ERVK -25 397 1 1 982 429 257 9 0 chr13 52051022 52051127 -68233185 + ID_B1 SINE B4 116 221 -3 1 982 1142 61 0 7 chr13 52051131 52051279 -68233033 + B1_Mus1 SINE Alu 1 147 -1 1 982 1011 276 87 9 chr13 52051480 52051824 -68232488 + MLT1C LTR MaLR 97 467 0 1 982 195 42 0 0 chr13 52051875 52051899 -68232413 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 1 982 315 337 51 131 chr13 52051899 52052025 -68232287 + B4 SINE B4 4 112 -180 1 982 739 222 105 5 chr13 52052025 52052215 -68232097 - B3 SINE B2 -7 209 1 1 982 315 337 51 131 chr13 52052215 52052402 -68231910 + B4 SINE B4 113 292 0 1 982 180 0 0 0 chr13 52052436 52052456 -68231856 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 982 546 16 0 0 chr13 52052823 52052886 -68231426 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 982 337 70 0 34 chr13 52053125 52053184 -68231128 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 982 463 310 124 30 chr13 52053224 52053251 -68231061 - B4A SINE B4 0 292 266 1 982 393 22 0 0 chr13 52053251 52053297 -68231015 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 982 463 310 124 30 chr13 52053297 52053535 -68230777 - B4A SINE B4 -27 265 3 1 982 662 165 0 18 chr13 52054020 52054131 -68230181 + PB1D10 SINE Alu 1 109 -8 1 982 450 0 0 0 chr13 52054190 52054240 -68230072 + (CAA)n Simple_repeat Simple_repeat 2 51 0 1 982 319 229 14 14 chr13 52054367 52054438 -68229874 - ID4_ SINE ID -11 72 2 1 982 913 244 52 52 chr13 52054798 52055087 -68229225 - B4 SINE B4 -3 289 1 1 982 250 353 47 99 chr13 52055248 52055423 -68228889 - ORR1D2 LTR MaLR -165 205 36 1 982 390 42 0 0 chr13 52055423 52055471 -68228841 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 982 250 353 47 99 chr13 52055471 52055506 -68228806 - ORR1D2 LTR MaLR -335 35 6 1 982 310 294 68 96 chr13 52055486 52055663 -68228649 - Charlie4a DNA MER1_type -319 189 18 1 982 647 264 44 92 chr13 52055731 52056002 -68228310 + B4A SINE B4 34 291 -1 1 982 240 322 11 11 chr13 52056220 52056314 -68227998 + BC1_Mm scRNA scRNA 6 99 -53 1 982 180 150 24 48 chr13 52057205 52057289 -68227023 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 982 27 0 0 0 chr13 52058506 52058533 -68225779 + AT_rich Low_complexity Low_complexity 1 27 0 1 982 3626 128 14 59 chr13 52058539 52059202 -68225110 - Lx3B LINE L1 0 6973 6341 1 982 762 242 142 0 chr13 52061032 52061222 -68223090 - ID_B1 SINE B4 0 224 8 1 982 968 252 18 79 chr13 52062019 52062087 -68222225 - B4A SINE B4 0 292 225 1 982 1112 85 97 0 chr13 52062087 52062263 -68222049 - B2_Mm2 SINE B2 -1 194 2 1 982 968 252 18 79 chr13 52062263 52062474 -68221838 - B4A SINE B4 -68 224 30 1 982 226 250 46 15 chr13 52062631 52062696 -68221616 - RLTR12B LTR ERVK -120 448 382 1 982 569 256 100 30 chr13 52062731 52062961 -68221351 - RLTR12B LTR ERVK -244 284 39 1 982 604 286 37 9 chr13 52063059 52063274 -68221038 - ID_B1 SINE B4 -3 221 1 1 982 576 246 174 25 chr13 52064007 52064249 -68220063 - B4 SINE B4 -13 279 2 1 982 378 0 0 0 chr13 52065289 52065331 -68218981 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 982 396 0 0 0 chr13 52066022 52066066 -68218246 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 982 636 208 41 7 chr13 52066395 52066540 -68217772 - B1_Mur4 SINE Alu 0 150 1 1 982 2985 39 8 3 chr13 52066622 52067012 -68217300 + MTB LTR MaLR 1 392 -8 1 982 748 264 108 32 chr13 52067019 52067269 -68217043 + B4 SINE B4 24 292 0 1 982 413 299 353 9 chr13 52067498 52067830 -68216482 + MER74B LTR ERVL 85 531 -91 1 982 195 69 0 0 chr13 52068254 52068283 -68216029 + (C)n Simple_repeat Simple_repeat 1 29 0 1 982 337 281 74 8 chr13 52068452 52068574 -68215738 - Tigger5 DNA MER2_type -2266 140 11 1 982 325 294 122 8 chr13 52068869 52069089 -68215223 + L1MB3 LINE L1 5891 6128 -43 1 982 688 321 60 25 chr13 52069098 52069379 -68214933 + B4A SINE B4 2 292 0 1 982 798 284 10 0 chr13 52072696 52072890 -68211422 - B3A SINE B2 0 198 3 1 982 297 0 0 0 chr13 52073066 52073099 -68211213 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 982 306 0 0 0 chr13 52073099 52073132 -68211180 + (GA)n Simple_repeat Simple_repeat 1 34 0 1 982 609 279 7 0 chr13 52073287 52073427 -68210885 - B3A SINE B2 -24 174 34 1 982 281 333 15 107 chr13 52073549 52073680 -68210632 - MLT2B2 LTR ERVL -390 125 7 1 982 795 303 21 105 chr13 52073856 52074056 -68210256 + ORR1E LTR MaLR 9 190 -169 1 982 1186 112 148 0 chr13 52074056 52074252 -68210060 - URR1A DNA MER1_type 0 226 2 1 982 795 303 21 105 chr13 52074252 52074423 -68209889 + ORR1E LTR MaLR 191 349 -10 1 982 591 15 0 0 chr13 52075196 52075264 -68209048 + (TG)n Simple_repeat Simple_repeat 2 69 0 1 982 203 250 0 0 chr13 52075285 52075329 -68208983 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 982 396 0 0 0 chr13 52075449 52075493 -68208819 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 982 294 332 37 41 chr13 52076084 52076329 -68207983 + RLTR42-int LTR ERVK 1157 1400 -4122 1 982 843 132 0 0 chr13 52076703 52076877 -68207435 + (TATG)n Simple_repeat Simple_repeat 4 177 0 1 982 429 20 0 0 chr13 52076878 52076928 -68207384 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 1 982 225 299 30 0 chr13 52079116 52079183 -68205129 - MLT1J2 LTR MaLR -311 137 69 1 982 269 233 40 27 chr13 52079396 52079471 -68204841 - B4 SINE B4 -206 86 11 1 982 1613 175 111 5 chr13 52079591 52079970 -68204342 + MTD LTR MaLR 1 419 0 1 982 534 283 178 42 chr13 52080289 52080525 -68203787 + B4 SINE B4 24 291 -1 1 982 2940 14 3 42 chr13 52080850 52081232 -68203080 + IAPLTR1_Mm LTR ERVK 1 367 0 1 982 7905 87 77 14 chr13 52081232 52082461 -68201851 + IAPEz-int LTR ERVK 8 1313 -5168 1 982 27910 22 1 1 chr13 52082460 52085731 -68198581 + IAPEz-int LTR ERVK 3210 6481 0 1 982 2940 14 3 42 chr13 52085731 52086113 -68198199 + IAPLTR1_Mm LTR ERVK 1 367 0 1 982 1854 182 27 16 chr13 52086264 52086633 -68197679 - MTD LTR MaLR -46 373 1 1 982 198 0 0 0 chr13 52087285 52087307 -68197005 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 982 248 188 212 59 chr13 52087327 52087412 -68196900 - RSINE1 SINE B4 -65 100 3 1 982 547 323 53 22 chr13 52087412 52087633 -68196679 - B4A SINE B4 -64 228 1 1 982 554 312 60 10 chr13 52088415 52088616 -68195696 - RMER15 LTR ERVL -13 562 352 1 982 638 241 163 26 chr13 52089507 52089847 -68194465 + RMER15 LTR ERVL 45 561 -14 1 982 588 323 94 15 chr13 52089973 52090240 -68194072 + B4A SINE B4 5 292 0 1 982 348 43 0 0 chr13 52090294 52090340 -68193972 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 982 301 220 11 42 chr13 52090729 52090824 -68193488 + GA-rich Low_complexity Low_complexity 6 97 0 1 982 432 0 0 0 chr13 52090968 52091016 -68193296 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 982 471 35 0 0 chr13 52091081 52091138 -68193174 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 982 414 296 0 0 chr13 52091211 52091319 -68192993 - PB1D10 SINE Alu -9 108 1 1 982 235 264 44 44 chr13 52091619 52091710 -68192602 - MTEa LTR MaLR -11 368 278 1 982 752 228 139 133 chr13 52092461 52092679 -68191633 - MTE2b LTR MaLR 0 379 155 1 982 1171 49 0 0 chr13 52092679 52092821 -68191491 - B1_Mus2 SINE Alu -5 142 1 1 982 752 228 139 133 chr13 52092821 52092941 -68191371 - MTE2b LTR MaLR -225 154 39 1 982 282 318 123 0 chr13 52092959 52093113 -68191199 - L1MB3 LINE L1 -120 6063 5891 1 982 391 172 62 45 chr13 52093180 52093417 -68190895 + (TG)n Simple_repeat Simple_repeat 1 241 0 1 982 961 255 60 15 chr13 52093916 52094183 -68190129 + B4 SINE B4 14 292 0 1 982 228 167 0 0 chr13 52095035 52095083 -68189229 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 982 1184 261 0 7 chr13 52096225 52096499 -68187813 - B4 SINE B4 0 292 21 1 982 271 315 97 100 chr13 52096787 52097087 -68187225 + ORR1E LTR MaLR 51 349 -10 1 982 185 226 0 31 chr13 52098085 52098149 -68186163 + (TATATG)n Simple_repeat Simple_repeat 1 62 0 1 982 632 264 6 48 chr13 52098149 52098316 -68185996 - RSINE1 SINE B4 0 165 6 1 982 267 79 0 0 chr13 52098329 52098367 -68185945 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 1 982 729 63 0 0 chr13 52098367 52098462 -68185850 + (TTTC)n Simple_repeat Simple_repeat 3 97 0 1 982 762 216 71 31 chr13 52098468 52098664 -68185648 - B4 SINE B4 -87 205 2 1 982 315 0 0 0 chr13 52099370 52099405 -68184907 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 982 249 244 102 23 chr13 52100253 52100341 -68183971 + ORR1E LTR MaLR 3 97 -262 1 982 258 271 0 0 chr13 52100402 52100520 -68183792 + (TG)n Simple_repeat Simple_repeat 1 118 0 1 982 300 293 0 0 chr13 52100539 52100621 -68183691 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 982 6827 68 30 1 chr13 52100635 52101562 -68182750 - L1_Mus3 LINE L1 -7 6631 5678 1 982 2892 92 0 0 chr13 52101560 52101961 -68182351 + L1_Mus3 LINE L1 5290 5690 -193 1 982 218 309 0 12 chr13 52101982 52102028 -68182284 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 982 468 0 0 0 chr13 52102028 52102080 -68182232 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1 982 218 309 0 12 chr13 52102080 52102115 -68182197 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 982 419 283 93 67 chr13 52102123 52102382 -68181930 - B4A SINE B4 -6 286 33 1 982 842 190 0 11 chr13 52102384 52102565 -68181747 + GA-rich Low_complexity Low_complexity 2 180 0 1 982 510 17 0 0 chr13 52103390 52103449 -68180863 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 982 1021 208 89 35 chr13 52103670 52103929 -68180383 - MTEa LTR MaLR -106 273 1 1 982 231 284 107 41 chr13 52104300 52104421 -68179891 + MER5A DNA MER1_type 61 189 0 1 982 1703 135 84 12 chr13 52104739 52105062 -68179250 + ORR1B1 LTR MaLR 41 386 -8 1 982 314 301 39 0 chr13 52105500 52105603 -68178709 + MT2A LTR ERVL 268 374 -159 1 982 586 339 168 10 chr13 52105752 52106241 -68178071 - L1MB3 LINE L1 -7 6176 5611 2 982 278 379 103 22 chr13 52106581 52106813 -68177499 + MER97c DNA MER1_type? 25 275 -815 2 982 596 267 65 19 chr13 52106833 52107047 -68177265 - Tigger7 DNA MER2_type -11 2480 2257 2 982 390 251 5 32 chr13 52107062 52107247 -68177065 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 2 982 502 288 147 0 chr13 52107264 52107448 -68176864 - ID_B1 SINE B4 -12 212 2 2 982 247 353 113 7 chr13 52107592 52107743 -68176569 + MER97c DNA MER1_type? 385 551 -539 2 982 723 201 0 0 chr13 52108139 52108648 -68175664 + (TG)n Simple_repeat Simple_repeat 1 509 0 2 982 265 246 62 0 chr13 52108719 52108784 -68175528 - B4 SINE B4 -219 73 5 2 982 536 282 44 19 chr13 52109894 52110053 -68174259 - RSINE1 SINE B4 0 165 3 2 982 198 103 0 0 chr13 52110892 52110921 -68173391 + (A)n Simple_repeat Simple_repeat 1 29 0 2 982 24 0 0 0 chr13 52111508 52111532 -68172780 + AT_rich Low_complexity Low_complexity 1 24 0 2 982 287 289 90 45 chr13 52111532 52111666 -68172646 - B1F SINE Alu 0 149 10 2 982 359 324 47 67 chr13 52111980 52112129 -68172183 + ORR1E LTR MaLR 1 146 -224 2 982 633 276 7 13 chr13 52112141 52112295 -68172017 - RSINE1 SINE B4 -2 163 11 2 982 452 266 125 21 chr13 52112303 52112495 -68171817 + ORR1E LTR MaLR 141 352 -7 2 982 870 257 179 51 chr13 52112660 52112996 -68171316 + MTEa LTR MaLR 1 379 0 2 982 414 0 0 0 chr13 52114073 52114119 -68170193 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 982 717 114 0 0 chr13 52114119 52114251 -68170061 + (GA)n Simple_repeat Simple_repeat 1 132 0 2 982 359 240 0 88 chr13 52115431 52115545 -68168767 + ID_B1 SINE B4 121 224 0 2 982 547 301 17 11 chr13 52115576 52115751 -68168561 + B4 SINE B4 31 206 -86 2 982 1459 257 51 5 chr13 52115763 52116135 -68168177 - MTD LTR MaLR -13 406 18 2 982 287 194 164 0 chr13 52116157 52116224 -68168088 + B4 SINE B4 203 280 -12 2 982 405 0 0 0 chr13 52116248 52116293 -68168019 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 982 198 0 0 0 chr13 52117787 52117809 -68166503 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 982 243 305 124 25 chr13 52117845 52117966 -68166346 - MLT1A0 LTR MaLR -3 362 230 2 982 2521 145 24 45 chr13 52118242 52118603 -68165709 + RLTR31B_Mm LTR ERVK 1 353 -204 2 982 192 77 0 0 chr13 52118603 52118629 -68165683 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 982 2521 147 26 40 chr13 52118629 52118786 -68165526 + RLTR31B_Mm LTR ERVK 354 557 0 2 982 267 79 0 0 chr13 52119031 52119069 -68165243 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 982 853 294 8 21 chr13 52119076 52119377 -68164935 - B4 SINE B4 -6 286 1 2 982 747 267 60 46 chr13 52122076 52122359 -68161953 - B4 SINE B4 -4 288 2 2 982 319 235 126 49 chr13 52123659 52123802 -68160510 + HAL1-3A_ME LINE L1 2284 2437 -421 2 982 290 289 0 70 chr13 52123861 52124047 -68160265 + G-rich Low_complexity Low_complexity 3 175 0 2 982 438 322 126 76 chr13 52125067 52125447 -68158865 + MLT2D LTR ERVL 11 409 -5 2 982 192 219 0 0 chr13 52125450 52125491 -68158821 + MIRb SINE MIR 55 95 -173 2 982 665 270 73 11 chr13 52126268 52126459 -68157853 - RMER15 LTR ERVL -36 539 337 2 982 460 217 95 65 chr13 52126463 52126631 -68157681 - RMER15 LTR ERVL -374 201 29 2 982 445 302 41 17 chr13 52126942 52127114 -68157198 + MIRb SINE MIR 58 233 -35 2 982 214 180 16 16 chr13 52127806 52127868 -68156444 + CT-rich Low_complexity Low_complexity 6 67 0 2 982 439 270 0 0 chr13 52127892 52128003 -68156309 - PB1D10 SINE Alu -6 111 1 2 982 210 170 0 21 chr13 52128275 52128323 -68155989 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 2 982 1114 248 46 7 chr13 52128631 52128911 -68155401 + B4A SINE B4 2 292 0 2 982 283 206 19 31 chr13 52128911 52129071 -68155241 + (CA)n Simple_repeat Simple_repeat 1 158 0 2 982 261 0 0 0 chr13 52129162 52129191 -68155121 + (TC)n Simple_repeat Simple_repeat 1 29 0 2 982 228 309 10 10 chr13 52129290 52129388 -68154924 - L1MD LINE L1 -1094 5052 4955 2 982 198 143 0 0 chr13 52129394 52129429 -68154883 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 982 261 312 93 8 chr13 52129572 52129701 -68154611 - L1MC LINE L1 -1371 4775 4636 2 982 239 250 68 14 chr13 52129977 52130050 -68154262 + B2_Mm2 SINE B2 4 80 -115 2 982 741 299 43 17 chr13 52130016 52130251 -68154061 + B4A SINE B4 48 288 -4 2 982 249 33 0 0 chr13 52130266 52130296 -68154016 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 982 379 278 29 23 chr13 52130352 52130525 -68153787 + (CATA)n Simple_repeat Simple_repeat 4 177 0 2 982 465 182 16 38 chr13 52130541 52130724 -68153588 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 982 184 100 0 48 chr13 52130766 52130808 -68153504 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 982 565 151 12 35 chr13 52130826 52130998 -68153314 + (CA)n Simple_repeat Simple_repeat 1 168 0 2 982 372 43 0 0 chr13 52131440 52131486 -68152826 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 982 228 259 93 12 chr13 52131516 52131602 -68152710 - MER2 DNA MER2_type -115 230 138 2 982 293 271 12 12 chr13 52132445 52132531 -68151781 + MTEb LTR MaLR 293 378 -1 2 982 246 292 42 42 chr13 52132579 52132697 -68151615 - Tigger7 DNA MER2_type -116 2375 2258 2 982 922 273 53 21 chr13 52133466 52133747 -68150565 + B4A SINE B4 1 290 -2 2 982 1098 100 0 0 chr13 52133763 52133943 -68150369 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 982 509 301 97 45 chr13 52134173 52134256 -68150056 + MTE2a LTR MaLR 98 194 -185 2 982 957 21 0 75 chr13 52134256 52134512 -68149800 + (CAGG)n Simple_repeat Simple_repeat 1 236 0 2 982 509 301 97 45 chr13 52134512 52134693 -68149619 + MTE2a LTR MaLR 195 379 0 2 982 812 102 16 0 chr13 52134898 52135026 -68149286 + (TTTC)n Simple_repeat Simple_repeat 1 130 0 2 982 1038 61 0 0 chr13 52135028 52135160 -68149152 - B1_Mus2 SINE Alu -13 134 3 2 982 673 232 117 64 chr13 52135211 52135460 -68148852 - B4 SINE B4 0 292 31 2 982 1062 185 114 4 chr13 52135694 52135949 -68148363 - RLTR11A2 LTR ERVK -144 383 101 2 982 414 241 146 66 chr13 52136048 52136199 -68148113 - RSINE1 SINE B4 0 165 3 2 982 724 106 41 0 chr13 52136339 52136562 -68147750 + (TCTA)n Simple_repeat Simple_repeat 1 232 0 2 982 519 294 14 15 chr13 52136584 52136743 -68147569 - B4A SINE B4 -66 158 1 2 982 372 355 22 36 chr13 52136979 52137204 -68147108 - L1MEd LINE L1 -5471 648 427 2 982 26 0 0 0 chr13 52138601 52138627 -68145685 + AT_rich Low_complexity Low_complexity 1 26 0 2 982 1076 95 0 0 chr13 52138630 52138777 -68145535 + B1_Mus2 SINE Alu 1 147 0 2 982 831 224 82 0 chr13 52138891 52139087 -68145225 - B3 SINE B2 -3 213 2 2 982 186 43 0 0 chr13 52139103 52139126 -68145186 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2 982 442 359 10 0 chr13 52139167 52139359 -68144953 + Lx8 LINE L1 6418 6611 -862 2 982 815 291 37 59 chr13 52139364 52139769 -68144543 + BGLII_B LTR ERVK 5 400 -41 2 982 998 299 11 39 chr13 52139794 52140149 -68144163 + Lx8 LINE L1 6603 6947 -526 2 982 583 206 144 8 chr13 52140918 52141050 -68143262 + B4 SINE B4 84 233 -59 2 982 276 30 0 0 chr13 52142217 52142250 -68142062 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 982 338 249 77 128 chr13 52143640 52143875 -68140437 - RLTR15 LTR ERVK -136 223 1 2 982 239 303 79 44 chr13 52145049 52145163 -68139149 + MLT1D LTR MaLR 5 122 -383 2 982 1028 266 25 14 chr13 52145166 52145452 -68138860 + B4 SINE B4 2 290 -2 2 982 506 254 67 100 chr13 52145514 52145724 -68138588 + MLT1D LTR MaLR 110 312 -193 2 982 233 265 0 0 chr13 52145744 52145793 -68138519 + B4A SINE B4 188 236 -56 2 982 2783 102 58 0 chr13 52145815 52146264 -68138048 + IAPLTR2_Mm LTR ERVK 1 475 0 2 982 4492 64 41 16 chr13 52146265 52146903 -68137409 + IAPEz-int LTR ERVK 9 662 -5819 2 982 933 59 0 0 chr13 52146903 52147022 -68137290 + IAPEz-int LTR ERVK 1359 1477 -5004 2 982 1829 82 4 0 chr13 52147023 52147268 -68137044 + IAPEz-int LTR ERVK 2252 2497 -5183 2 982 14677 30 5 5 chr13 52147295 52149068 -68135244 + IAPEz-int LTR ERVK 4708 6479 -2 2 982 2793 100 58 0 chr13 52149070 52149519 -68134793 + IAPLTR2_Mm LTR ERVK 1 475 0 2 982 261 0 0 0 chr13 52149588 52149617 -68134695 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 982 265 238 271 12 chr13 52150481 52150563 -68133749 + ID_B1 SINE B4 103 206 -18 2 982 2030 135 50 8 chr13 52150563 52150922 -68133390 + ORR1B1 LTR MaLR 1 374 -20 2 982 326 68 0 0 chr13 52151024 52151068 -68133244 + ORR1B1 LTR MaLR 351 394 0 2 982 994 238 146 77 chr13 52152914 52153292 -68131020 + MTD LTR MaLR 1 404 -15 2 982 435 203 121 48 chr13 52154547 52154671 -68129641 + B1_Mur2 SINE Alu 1 133 -16 2 982 234 0 0 0 chr13 52154755 52154781 -68129531 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 982 210 37 0 0 chr13 52154833 52154860 -68129452 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 2 982 1144 48 7 0 chr13 52154869 52155014 -68129298 - B1_Mm SINE Alu -1 146 1 2 982 595 285 31 25 chr13 52155018 52155180 -68129132 - B4A SINE B4 -93 199 37 2 982 667 269 14 97 chr13 52155184 52155472 -68128840 - MTEa LTR MaLR -8 371 108 2 982 2450 77 3 0 chr13 52156467 52156793 -68127519 - ORR1A2 LTR MaLR 0 327 1 2 982 1914 152 50 3 chr13 52157238 52157580 -68126732 - ORR1C2 LTR MaLR -26 358 1 2 982 4069 300 68 24 chr13 52158250 52158698 -68125614 + Lx8 LINE L1 5730 6198 -1275 2 982 288 0 0 0 chr13 52158698 52158730 -68125582 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 982 387 0 0 0 chr13 52158730 52158772 -68125540 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 982 4069 300 68 24 chr13 52158772 52159815 -68124497 + Lx8 LINE L1 6199 7287 -186 2 982 221 162 189 0 chr13 52160966 52161040 -68123272 + PB1D10 SINE Alu 21 108 -9 2 982 262 275 72 0 chr13 52164060 52164129 -68120183 + B4 SINE B4 6 79 -213 2 982 789 221 11 22 chr13 52164263 52164448 -68119864 + B4 SINE B4 94 276 -16 2 982 1880 117 41 103 chr13 52164853 52165290 -68119022 - RMER17C LTR ERVK 0 410 1 2 982 1091 82 0 0 chr13 52165474 52165620 -68118692 + B1_Mus1 SINE Alu 3 148 0 2 982 706 181 11 22 chr13 52165621 52165802 -68118510 + GA-rich Low_complexity Low_complexity 2 180 0 2 982 768 329 94 33 chr13 52165805 52165948 -68118364 - MT2A LTR ERVL -72 461 319 2 982 810 157 208 36 chr13 52165948 52166140 -68118172 - URR1A DNA MER1_type 0 226 2 2 982 768 329 94 33 chr13 52166140 52166420 -68117892 - MT2A LTR ERVL -215 318 12 2 122 1095 231 78 46 chr13 52166421 52166766 -68117546 + ORR1E LTR MaLR 2 357 -2 3 983 186 133 0 0 chr13 52167311 52167341 -68116971 + (TCTCC)n Simple_repeat Simple_repeat 1 30 0 3 983 387 299 100 15 chr13 52167951 52168151 -68116161 + MLT1B LTR MaLR 1 217 -173 3 983 1226 238 126 29 chr13 52168960 52169341 -68114971 + MTD LTR MaLR 2 419 0 3 983 624 312 65 33 chr13 52170117 52170392 -68113920 + B4 SINE B4 5 288 -4 3 983 294 271 0 0 chr13 52171474 52171544 -68112768 + GA-rich Low_complexity Low_complexity 3 72 0 3 983 411 21 0 0 chr13 52172033 52172081 -68112231 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 983 497 286 56 60 chr13 52173668 52173884 -68110428 - B3 SINE B2 0 216 2 3 983 1199 266 29 38 chr13 52174029 52174373 -68109939 + ORR1E LTR MaLR 1 341 -18 3 983 185 227 91 0 chr13 52174798 52174842 -68109470 + L2a LINE L2 3366 3413 -13 3 983 315 0 0 0 chr13 52175862 52175897 -68108415 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 983 444 37 0 0 chr13 52175897 52175950 -68108362 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 983 365 218 0 37 chr13 52176638 52176719 -68107593 + B4 SINE B4 3 80 -212 3 983 521 302 10 72 chr13 52177012 52177219 -68107093 + B3A SINE B2 1 194 -4 3 983 394 325 32 25 chr13 52177221 52177235 -68107077 + MER44D DNA MER2_type 76 89 -616 3 983 1140 47 0 45 chr13 52177235 52177390 -68106922 + B1_Mus1 SINE Alu 1 148 0 3 983 394 325 32 25 chr13 52177390 52177533 -68106779 + MER44D DNA MER2_type 90 234 -471 3 983 905 0 9 0 chr13 52177607 52177712 -68106600 + (GGGAGA)n Simple_repeat Simple_repeat 4 109 0 3 983 313 351 67 14 chr13 52177723 52177931 -68106381 - ORR1E LTR MaLR -105 254 36 3 983 32 0 0 0 chr13 52177972 52178004 -68106308 + AT_rich Low_complexity Low_complexity 1 32 0 3 983 365 267 213 7 chr13 52178531 52178667 -68105645 + RSINE1 SINE B4 2 165 0 3 983 232 191 47 16 chr13 52179897 52179961 -68104351 + (CAGAGA)n Simple_repeat Simple_repeat 5 70 0 3 983 342 0 0 0 chr13 52180712 52180750 -68103562 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 983 395 323 32 8 chr13 52181281 52181406 -68102906 - MER2 DNA MER2_type -114 231 104 3 983 595 256 8 0 chr13 52181454 52181587 -68102725 - B1_Mur1 SINE Alu -5 144 11 3 983 266 219 33 99 chr13 52181513 52181604 -68102708 - MT2B2 LTR ERVL -344 240 156 3 983 341 300 0 29 chr13 52181798 52181901 -68102411 + PB1D10 SINE Alu 18 117 0 3 983 276 252 8 16 chr13 52182278 52182403 -68101909 + CT-rich Low_complexity Low_complexity 5 128 0 3 983 313 240 8 8 chr13 52182419 52182504 -68101808 - PB1D10 SINE Alu -21 99 15 3 983 353 311 61 22 chr13 52182563 52182744 -68101568 - MER21B LTR ERV1 -90 773 586 3 983 28 48 0 0 chr13 52182823 52182865 -68101447 + AT_rich Low_complexity Low_complexity 1 42 0 3 983 51 51 0 0 chr13 52183002 52183081 -68101231 + AT_rich Low_complexity Low_complexity 1 79 0 3 983 512 278 222 0 chr13 52183208 52183402 -68100910 - MER21B LTR ERV1 -600 263 27 3 983 646 236 178 28 chr13 52183485 52183738 -68100574 - B4A SINE B4 -1 291 1 3 983 355 316 0 0 chr13 52186979 52187077 -68097235 - RSINE1 SINE B4 -65 100 3 3 983 381 22 0 0 chr13 52187410 52187456 -68096856 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 983 414 39 0 0 chr13 52187456 52187507 -68096805 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 983 506 275 14 28 chr13 52187523 52187665 -68096647 - RSINE1 SINE B4 -22 143 4 3 983 332 374 24 18 chr13 52187739 52187905 -68096407 + MLT1A LTR MaLR 187 353 -21 3 983 1595 256 49 97 chr13 52188715 52189290 -68095022 + RMER19C LTR ERVK 1 611 0 3 983 276 314 52 99 chr13 52189359 52189550 -68094762 + B4 SINE B4 35 216 -76 3 983 243 103 0 0 chr13 52189584 52189623 -68094689 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 983 318 237 66 0 chr13 52189723 52189799 -68094513 + ID4 SINE ID 3 83 0 3 983 442 80 40 0 chr13 52189807 52189882 -68094430 + (GGAA)n Simple_repeat Simple_repeat 2 79 0 3 983 443 18 18 0 chr13 52190759 52190815 -68093497 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 983 183 80 0 0 chr13 52191879 52191904 -68092408 + (TG)n Simple_repeat Simple_repeat 1 25 0 3 983 374 308 19 52 chr13 52191989 52192143 -68092169 + Lx8 LINE L1 7085 7233 -240 3 983 352 258 30 40 chr13 52192143 52192244 -68092068 + RMER15 LTR ERVL 371 470 -105 3 983 536 268 83 67 chr13 52192508 52192688 -68091624 + B4 SINE B4 110 292 0 3 983 585 323 86 52 chr13 52193992 52194341 -68089971 - MLT1B LTR MaLR -26 364 4 3 983 244 172 67 52 chr13 52194931 52195066 -68089246 + (TCTA)n Simple_repeat Simple_repeat 3 139 0 3 983 410 264 28 28 chr13 52196698 52196807 -68087505 + B1F SINE Alu 15 123 -26 3 983 490 255 0 10 chr13 52196712 52196811 -68087501 + ID_B1 SINE B4 108 205 -19 3 983 180 0 0 0 chr13 52197803 52197823 -68086489 + (CTCA)n Simple_repeat Simple_repeat 1 20 0 3 983 768 73 24 16 chr13 52197937 52198062 -68086250 + (TTTCC)n Simple_repeat Simple_repeat 5 130 0 3 983 1023 223 5 0 chr13 52198081 52198278 -68086034 - ID_B1 SINE B4 -25 199 2 3 983 438 20 0 0 chr13 52198313 52198364 -68085948 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 983 620 351 14 89 chr13 52198370 52198449 -68085863 - B4A SINE B4 -18 274 220 3 983 507 17 0 0 chr13 52198449 52198509 -68085803 + (TCCA)n Simple_repeat Simple_repeat 3 62 0 3 983 620 351 14 89 chr13 52198509 52198720 -68085592 - B4A SINE B4 -73 219 6 3 983 338 129 16 0 chr13 52198728 52198790 -68085522 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 3 983 558 0 0 0 chr13 52198984 52199046 -68085266 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 983 941 297 29 57 chr13 52199946 52200109 -68084203 + MTE2a LTR MaLR 40 194 -185 3 983 2960 57 26 0 chr13 52200109 52200498 -68083814 - MTB LTR MaLR -1 399 1 3 983 941 297 29 57 chr13 52200498 52200684 -68083628 + MTE2a LTR MaLR 195 379 0 3 983 545 0 15 0 chr13 52202007 52202072 -68082240 + (TCTA)n Simple_repeat Simple_repeat 3 68 0 3 983 618 272 57 78 chr13 52202129 52202412 -68081900 - B4 SINE B4 -14 278 2 3 983 447 279 0 0 chr13 52202520 52202624 -68081688 - PB1D10 SINE Alu -8 109 6 3 983 244 238 0 31 chr13 52202568 52202633 -68081679 - B4A SINE B4 -146 146 84 3 983 254 163 0 0 chr13 52202640 52202683 -68081629 - MLT1A0 LTR MaLR -230 135 93 3 983 276 357 0 0 chr13 52202687 52202805 -68081507 - L1MC LINE L1 -2531 3615 3498 3 983 745 296 109 40 chr13 52203865 52204045 -68080267 - MTEa LTR MaLR -6 373 180 3 983 236 77 26 0 chr13 52204045 52204084 -68080228 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 3 983 745 296 109 40 chr13 52204084 52204252 -68080060 - MTEa LTR MaLR -200 179 1 3 983 207 0 0 0 chr13 52204812 52204835 -68079477 + (A)n Simple_repeat Simple_repeat 1 23 0 3 983 360 0 0 0 chr13 52205371 52205411 -68078901 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 983 323 340 7 41 chr13 52205903 52206050 -68078262 + Tigger5 DNA MER2_type 37 178 -2228 3 983 844 223 32 43 chr13 52206508 52206785 -68077527 - B4A SINE B4 -18 274 1 3 983 288 0 0 0 chr13 52208318 52208350 -68075962 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 983 492 287 80 44 chr13 52208409 52208635 -68075677 + B4 SINE B4 44 277 -15 3 983 330 152 0 0 chr13 52208715 52208774 -68075538 + (CATA)n Simple_repeat Simple_repeat 4 62 0 3 983 3241 69 0 11 chr13 52209472 52209912 -68074400 - L1_Mus1 LINE L1 0 6567 6133 3 983 907 265 69 68 chr13 52210259 52210584 -68073728 + ORR1E LTR MaLR 1 342 -37 3 983 228 14 130 0 chr13 52214295 52214364 -68069948 + (GGGA)n Simple_repeat Simple_repeat 3 80 0 3 983 208 303 0 73 chr13 52214960 52215056 -68069256 + G-rich Low_complexity Low_complexity 4 92 0 3 983 333 0 0 0 chr13 52216700 52216737 -68067575 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 3 983 942 274 3 85 chr13 52219337 52219644 -68064668 + RMER15 LTR ERVL 294 575 0 3 983 249 100 0 0 chr13 52219677 52219717 -68064595 - ORR1A4 LTR MaLR -285 44 5 3 983 1654 292 70 30 chr13 52219744 52220866 -68063446 + RMER15-int LTR ERVL 2088 3254 -1745 3 983 510 288 24 39 chr13 52220931 52221137 -68063175 + RMER15-int LTR ERVL 4797 4999 0 3 983 887 231 43 76 chr13 52221318 52221591 -68062721 + RMER15 LTR ERVL 275 538 -37 3 983 926 298 79 14 chr13 52221591 52221953 -68062359 + MTD LTR MaLR 1 378 -41 3 983 666 286 74 35 chr13 52221985 52222242 -68062070 - B4A SINE B4 -21 271 5 3 983 384 312 92 20 chr13 52222634 52222830 -68061482 + MLT1F2 LTR MaLR 312 521 -39 3 983 207 0 0 0 chr13 52223258 52223281 -68061031 + (CA)n Simple_repeat Simple_repeat 1 23 0 3 983 279 0 0 0 chr13 52223534 52223565 -68060747 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 983 253 296 24 24 chr13 52224818 52224901 -68059411 + ID4 SINE ID 1 83 0 3 983 303 186 44 44 chr13 52225044 52225134 -68059178 + Lx9 LINE L1 6830 6919 -725 3 983 886 213 164 50 chr13 52225205 52225467 -68058845 + B4 SINE B4 1 292 0 3 983 446 260 83 43 chr13 52225509 52225777 -68058535 + L1MB2 LINE L1 5159 5432 -742 3 983 452 292 35 75 chr13 52225926 52226126 -68058186 - B3A SINE B2 -6 192 1 3 983 239 302 52 10 chr13 52226127 52226224 -68058088 + L1MB2 LINE L1 5624 5724 -456 3 983 239 228 70 0 chr13 52226282 52226339 -68057973 + L1MB2 LINE L1 6068 6128 -43 3 983 658 129 19 11 chr13 52226381 52226503 -68057809 - ORR1C2 LTR MaLR -238 132 12 3 983 294 218 12 25 chr13 52226492 52226572 -68057740 - ORR1C2-int LTR MaLR -348 1161 1083 3 983 2499 215 30 20 chr13 52226560 52227119 -68057193 - ORR1C2-int LTR MaLR -805 565 1 3 983 1173 209 53 15 chr13 52227119 52227376 -68056936 - ORR1C2 LTR MaLR 0 384 118 3 983 1838 166 97 33 chr13 52227376 52227737 -68056575 + ORR1C2 LTR MaLR 1 384 0 3 983 769 120 8 0 chr13 52227737 52227850 -68056462 - ORR1C2 LTR MaLR -260 114 1 3 983 458 364 36 9 chr13 52227945 52228275 -68056037 - L1MB8 LINE L1 -186 5992 5654 3 983 499 280 89 62 chr13 52228578 52228837 -68055475 + L1MB7 LINE L1 5893 6158 -26 3 983 386 43 0 0 chr13 52229520 52229567 -68054745 - ORR1A3 LTR MaLR -8 318 272 3 983 23 0 0 0 chr13 52229702 52229725 -68054587 + AT_rich Low_complexity Low_complexity 1 23 0 3 983 768 308 67 109 chr13 52229742 52230172 -68054140 - MLT1D LTR MaLR 0 505 94 4 983 2228 72 26 1 chr13 52230243 52230542 -68053770 - ORR1A2 LTR MaLR -6 353 1 4 983 349 193 177 40 chr13 52231120 52231244 -68053068 + RLTR25B LTR ERVK 369 509 -519 4 983 824 61 26 0 chr13 52231171 52231285 -68053027 + B1_Mus2 SINE Alu 31 147 0 4 983 224 54 0 51 chr13 52231285 52231324 -68052988 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 4 983 1272 131 5 5 chr13 52231545 52231737 -68052575 - B2_Mm2 SINE B2 -2 193 2 4 983 228 244 0 0 chr13 52233875 52233916 -68050396 + Lx8 LINE L1 7029 7069 -404 4 983 440 339 0 0 chr13 52234030 52234145 -68050167 + RMER15 LTR ERVL 371 485 -90 4 983 419 196 42 32 chr13 52234308 52234403 -68049909 + PB1D10 SINE Alu 13 108 -9 4 983 680 288 64 25 chr13 52235183 52235464 -68048848 + B4 SINE B4 1 292 0 4 983 495 48 0 0 chr13 52235490 52235552 -68048760 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 983 224 163 0 20 chr13 52235558 52235589 -68048723 + polypurine Low_complexity Low_complexity 2 32 0 4 983 282 56 0 0 chr13 52235589 52235625 -68048687 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 983 224 163 0 20 chr13 52235625 52235643 -68048669 + polypurine Low_complexity Low_complexity 33 50 0 4 983 793 269 51 43 chr13 52235842 52236202 -68048110 - L1_Mur3 LINE L1 -158 5722 5385 4 983 263 258 0 0 chr13 52236250 52236312 -68048000 + (CATA)n Simple_repeat Simple_repeat 4 65 0 4 983 449 226 6 0 chr13 52236313 52236490 -68047822 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 983 444 208 6 27 chr13 52236509 52236524 -68047788 + (CA)n Simple_repeat Simple_repeat 2 15 0 4 983 216 0 0 0 chr13 52236524 52236548 -68047764 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 4 983 444 208 6 27 chr13 52236548 52236715 -68047597 + (CA)n Simple_repeat Simple_repeat 2 166 0 4 983 361 271 25 3 chr13 52236716 52236868 -68047444 - L1M2 LINE L1 -903 5240 5034 4 983 849 242 10 45 chr13 52236883 52237082 -68047230 - B3A SINE B2 -6 192 1 4 983 2575 80 3 0 chr13 52237470 52237796 -68046516 + ORR1A2 LTR MaLR 1 327 0 4 983 11436 121 52 25 chr13 52237796 52238297 -68046015 + ORR1A2-int LTR MaLR 1 506 -1457 4 983 1202 61 0 0 chr13 52238297 52238444 -68045868 + B1_Mus1 SINE Alu 2 148 0 4 983 11436 121 52 25 chr13 52238444 52239853 -68044459 + ORR1A2-int LTR MaLR 507 1963 0 4 983 2302 74 29 0 chr13 52239853 52240163 -68044149 + ORR1A2 LTR MaLR 1 319 -8 4 983 234 0 0 0 chr13 52240399 52240425 -68043887 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 983 405 0 0 0 chr13 52240449 52240494 -68043818 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 983 279 169 0 119 chr13 52240494 52240561 -68043751 - ID4_ SINE ID -17 66 8 4 983 343 320 269 34 chr13 52240528 52240881 -68043431 + MLT1J LTR MaLR 74 509 -3 4 983 423 290 66 104 chr13 52241224 52241513 -68042799 - RMER15 LTR ERVL -78 497 220 4 983 1066 152 96 64 chr13 52242074 52242292 -68042020 + URR1A DNA MER1_type 2 226 0 4 983 791 262 50 5 chr13 52242877 52243117 -68041195 - B4A SINE B4 -8 284 2 4 983 26 0 0 0 chr13 52243225 52243251 -68041061 + AT_rich Low_complexity Low_complexity 1 26 0 4 983 340 290 16 12 chr13 52243382 52243478 -68040834 - PB1D10 SINE Alu -49 100 2 4 983 1614 164 45 78 chr13 52244282 52244706 -68039606 - RMER17C LTR ERVK 0 410 1 4 983 732 265 94 5 chr13 52244823 52245024 -68039288 + ID_B1 SINE B4 2 220 -4 4 983 1207 212 118 20 chr13 52245380 52245691 -68038621 - ORR1D1 LTR MaLR -28 351 7 4 983 324 0 0 0 chr13 52246444 52246480 -68037832 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 983 393 58 0 0 chr13 52247833 52247885 -68036427 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 983 328 97 32 0 chr13 52248331 52248393 -68035919 + (TTG)n Simple_repeat Simple_repeat 2 65 0 4 983 248 316 82 108 chr13 52249912 52250107 -68034205 + B4 SINE B4 87 276 -16 4 983 386 171 92 0 chr13 52251709 52251785 -68032527 + ID4_ SINE ID 1 83 0 4 983 211 273 43 43 chr13 52252362 52252431 -68031881 - L2a LINE L2 -42 3384 3316 4 983 662 242 53 0 chr13 52252467 52252599 -68031713 - B1_Mur1 SINE Alu 0 149 11 4 983 1147 248 176 86 chr13 52252606 52252667 -68031645 - MT2A LTR ERVL 0 533 473 4 983 483 100 0 0 chr13 52252667 52252737 -68031575 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 983 1147 248 176 86 chr13 52252737 52253164 -68031148 - MT2A LTR ERVL -61 472 3 4 983 2862 104 16 25 chr13 52253690 52254133 -68030179 + RLTR13D6 LTR ERVK 1 439 -463 4 983 729 200 41 0 chr13 52254136 52254281 -68030031 + RLTR13D5 LTR ERVK 873 1023 0 4 983 1239 235 115 56 chr13 52254779 52255135 -68029177 - MTEa LTR MaLR -2 377 1 4 983 245 233 178 0 chr13 52255582 52255655 -68028657 + MTE2a LTR MaLR 11 96 -283 4 983 297 0 0 0 chr13 52255863 52255896 -68028416 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 983 898 284 14 22 chr13 52255980 52256203 -68028109 - B4A SINE B4 -3 289 69 4 983 180 0 0 0 chr13 52256907 52256927 -68027385 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 983 228 208 41 20 chr13 52256929 52256978 -68027334 + Lx8 LINE L1 6205 6254 -1219 4 983 2375 110 3 3 chr13 52256984 52257320 -68026992 - ORR1A1 LTR MaLR -8 338 3 4 983 343 164 0 32 chr13 52257370 52257433 -68026879 + Lx8 LINE L1 6309 6369 -1104 4 983 1791 309 32 18 chr13 52257555 52258119 -68026193 + Lx8 LINE L1 6374 6945 -528 4 983 681 262 94 0 chr13 52258115 52258275 -68026037 + Lx8 LINE L1 7061 7235 -238 4 983 1298 248 32 50 chr13 52258277 52258655 -68025657 + MTE2b LTR MaLR 1 371 -8 4 983 484 302 50 72 chr13 52259052 52259468 -68024844 - MLT2B1 LTR ERVL -37 525 1 4 983 227 264 54 27 chr13 52260483 52260557 -68023755 - L1ME2z LINE L1 -7 6437 6362 4 983 489 352 25 41 chr13 52260582 52260825 -68023487 + Tigger5 DNA MER2_type 1 239 -2167 4 983 781 253 0 24 chr13 52261150 52261168 -68023144 + B4 SINE B4 63 80 -212 4 983 279 54 0 0 chr13 52261168 52261205 -68023107 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 983 180 0 0 0 chr13 52261205 52261224 -68023088 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 983 781 253 0 24 chr13 52261224 52261370 -68022942 + B4 SINE B4 81 223 -69 4 983 216 158 0 0 chr13 52261378 52261416 -68022896 + GA-rich Low_complexity Low_complexity 2 39 0 4 983 1059 264 56 122 chr13 52261507 52261990 -68022322 - RLTR12B LTR ERVK -31 497 47 4 983 622 330 132 11 chr13 52262471 52262547 -68021765 + Tigger7 DNA MER2_type 48 126 -2365 4 983 3318 64 0 14 chr13 52262547 52262960 -68021352 + MTB_Mm LTR MaLR 1 407 0 4 983 622 330 132 11 chr13 52262960 52263156 -68021156 + Tigger7 DNA MER2_type 127 353 -2138 4 983 333 0 0 0 chr13 52263200 52263237 -68021075 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 983 225 292 55 22 chr13 52263692 52263783 -68020529 - LTR81A LTR ERV1? -1235 115 22 4 983 396 319 77 25 chr13 52265364 52265560 -68018752 + MER58A DNA MER1_type 4 209 -15 4 983 2050 176 55 12 chr13 52265826 52266228 -68018084 + MTD LTR MaLR 1 419 0 4 983 941 246 131 59 chr13 52266626 52266946 -68017366 + MTEa LTR MaLR 5 347 -32 4 983 378 320 32 0 chr13 52267206 52267331 -68016981 + ERVL-E-int LTR ERVL 2919 3047 -2620 4 983 811 243 0 46 chr13 52268203 52268397 -68015915 - B3A SINE B2 -12 186 2 4 983 2774 133 82 12 chr13 52269838 52270326 -68013986 - RLTR28 LTR ERVL -2 522 1 4 983 512 290 289 39 chr13 52270423 52270603 -68013709 - RMER15 LTR ERVL 0 575 337 4 983 1416 84 21 5 chr13 52270603 52270794 -68013518 + B2_Mm2 SINE B2 1 194 -1 4 983 512 290 289 39 chr13 52270794 52271073 -68013239 - RMER15 LTR ERVL -239 336 1 4 983 280 245 0 0 chr13 52271583 52271632 -68012680 + B4 SINE B4 239 287 -5 4 983 396 0 0 0 chr13 52272568 52272612 -68011700 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 983 668 266 133 52 chr13 52272612 52272882 -68011430 + MTD LTR MaLR 1 292 -127 4 983 214 174 0 98 chr13 52273178 52273229 -68011083 + B4A SINE B4 2 47 -245 4 983 660 188 0 0 chr13 52273229 52273362 -68010950 + (CA)n Simple_repeat Simple_repeat 1 133 0 4 983 342 208 14 14 chr13 52273362 52273435 -68010877 + HAL1-3A_ME LINE L1 1976 2048 -810 4 983 879 164 0 20 chr13 52273670 52273819 -68010493 - B1_Mus1 SINE Alu -1 147 2 4 983 472 355 92 51 chr13 52274409 52274703 -68009609 + MLT1A LTR MaLR 35 340 -34 4 983 321 301 29 35 chr13 52274918 52275090 -68009222 - Lx8 LINE L1 -1 7472 7302 4 983 356 297 89 0 chr13 52275107 52275208 -68009104 - Lx8 LINE L1 -248 7225 7116 4 983 720 71 0 0 chr13 52275940 52276039 -68008273 + (CTAGGG)n Simple_repeat Simple_repeat 1 99 0 4 983 493 281 14 104 chr13 52276840 52277119 -68007193 + B4 SINE B4 48 292 0 4 983 429 193 0 0 chr13 52277314 52277464 -68006848 + CT-rich Low_complexity Low_complexity 4 153 0 4 983 2721 83 5 37 chr13 52277520 52277897 -68006415 + RLTR8 LTR ERVK 1 365 0 4 983 413 116 14 0 chr13 52279554 52279623 -68004689 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 983 436 315 66 66 chr13 52279697 52279925 -68004387 - B4 SINE B4 -60 232 5 4 983 327 274 72 72 chr13 52280022 52280177 -68004135 + MER33 DNA MER1_type 2 157 -167 4 983 643 254 80 17 chr13 52280177 52280353 -68003959 + B3A SINE B2 2 188 -10 4 983 327 274 72 72 chr13 52280353 52280390 -68003922 + MER33 DNA MER1_type 158 194 -130 4 983 336 64 0 0 chr13 52280489 52280536 -68003776 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 4 983 1364 165 15 38 chr13 52280890 52281154 -68003158 + RMER4B LTR ERVK 41 298 -287 4 983 217 193 103 24 chr13 52281356 52281521 -68002791 + (TTGG)n Simple_repeat Simple_repeat 1 178 0 4 983 1217 199 155 17 chr13 52281523 52281814 -68002498 + RMER4B LTR ERVK 255 585 0 4 983 344 243 196 9 chr13 52281963 52282075 -68002237 + L2c LINE L2 3242 3374 -13 4 983 732 247 5 102 chr13 52282863 52283079 -68001233 + B3A SINE B2 1 195 -3 4 983 278 240 144 10 chr13 52284012 52284109 -68000203 + MLT1A1 LTR MaLR 4 113 -246 4 983 306 0 0 0 chr13 52284935 52284969 -67999343 + (A)n Simple_repeat Simple_repeat 1 34 0 4 983 257 229 23 57 chr13 52285746 52285834 -67998478 - MIRb SINE MIR -144 124 40 4 983 448 254 43 65 chr13 52286239 52286378 -67997934 + ID_B1 SINE B4 80 215 -9 4 983 183 292 20 122 chr13 52286715 52286863 -67997449 - L3 LINE CR1 -2158 2331 2199 5 983 288 0 0 0 chr13 52287310 52287342 -67996970 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 983 326 333 14 0 chr13 52287391 52287535 -67996777 + (CATATA)n Simple_repeat Simple_repeat 1 146 0 5 983 216 0 0 0 chr13 52287562 52287586 -67996726 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 983 307 210 62 0 chr13 52288166 52288247 -67996065 + L1M1 LINE L1 5752 5837 -463 5 983 180 328 43 29 chr13 52289761 52289830 -67994482 - L3 LINE CR1 -1491 2998 2929 5 983 3176 63 5 2 chr13 52290045 52290440 -67993872 - MTA_Mm LTR MaLR 0 396 1 5 983 246 242 32 0 chr13 52290978 52291040 -67993272 - L1MDa LINE L1 -6552 81 18 5 983 258 186 587 54 chr13 52291142 52291234 -67993078 + MTEa LTR MaLR 12 152 -227 5 983 327 49 0 0 chr13 52291633 52291674 -67992638 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 983 378 0 0 0 chr13 52291952 52291994 -67992318 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 983 623 263 135 41 chr13 52292457 52292723 -67991589 + B4A SINE B4 2 292 0 5 983 214 246 18 0 chr13 52292725 52292782 -67991530 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 983 335 162 56 14 chr13 52292808 52292952 -67991360 + (CA)n Simple_repeat Simple_repeat 2 151 0 5 983 201 159 48 24 chr13 52293000 52293084 -67991228 + (CA)n Simple_repeat Simple_repeat 2 87 0 5 983 1386 125 141 46 chr13 52293553 52293879 -67990433 - RMER17C LTR ERVK 0 410 54 5 983 203 403 0 0 chr13 52295237 52295366 -67988946 + (CA)n Simple_repeat Simple_repeat 2 130 0 5 983 24 0 0 0 chr13 52296460 52296484 -67987828 + AT_rich Low_complexity Low_complexity 1 24 0 5 983 1051 249 121 63 chr13 52296876 52297257 -67987055 - MTD LTR MaLR -12 407 5 5 983 183 80 0 0 chr13 52297257 52297282 -67987030 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 5 984 672 264 70 10 chr13 52298479 52298678 -67985634 + B4A SINE B4 1 211 -81 5 984 2223 92 79 0 chr13 52298678 52298981 -67985331 + ORR1A2 LTR MaLR 1 327 0 5 984 11056 128 48 14 chr13 52298981 52300853 -67983459 + ORR1A2-int LTR MaLR 15 1963 0 5 984 453 198 73 0 chr13 52300853 52300866 -67983446 + B4A SINE B4 190 205 -87 5 984 2030 117 58 13 chr13 52300866 52301179 -67983133 + ORR1A2 LTR MaLR 1 327 0 5 984 453 198 73 0 chr13 52301179 52301261 -67983051 + B4A SINE B4 206 291 -1 5 984 631 345 45 68 chr13 52301783 52302014 -67982298 - MER44B DNA MER2_type -211 339 102 5 984 1541 53 16 0 chr13 52302014 52302201 -67982111 + B2_Mm2 SINE B2 1 190 -5 5 984 631 345 45 68 chr13 52302201 52302280 -67982032 - MER44B DNA MER2_type -449 101 36 5 984 199 182 105 35 chr13 52302436 52302493 -67981819 - MIRc SINE MIR -135 133 73 5 984 1842 130 90 0 chr13 52302549 52302849 -67981463 - IAPEY3_LTR LTR ERVK -5 327 1 5 984 26 0 0 0 chr13 52303160 52303186 -67981126 + GC_rich Low_complexity Low_complexity 1 26 0 5 984 390 283 11 32 chr13 52303197 52303292 -67981020 - MER63D DNA AcHobo -968 93 1 5 984 903 112 0 0 chr13 52304272 52304442 -67979870 + (CA)n Simple_repeat Simple_repeat 1 170 0 5 984 1046 237 49 98 chr13 52304556 52304813 -67979499 + ORR1E LTR MaLR 5 255 -104 5 984 1405 64 0 26 chr13 52304813 52305006 -67979306 - B2_Mm2 SINE B2 -6 189 2 5 984 1046 237 49 98 chr13 52305006 52305075 -67979237 + ORR1E LTR MaLR 256 315 -44 5 984 376 308 65 58 chr13 52306361 52306499 -67977813 - MLT1G LTR MaLR -145 446 308 5 984 2401 149 65 8 chr13 52306948 52307346 -67976966 - MTC LTR MaLR 0 421 1 5 984 1217 278 3 53 chr13 52307840 52308144 -67976168 - B4A SINE B4 0 292 4 5 984 1117 242 82 35 chr13 52308531 52308902 -67975410 + MTD LTR MaLR 18 405 -14 5 984 703 112 47 0 chr13 52309802 52309972 -67974340 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 5 984 1103 216 19 0 chr13 52310581 52310789 -67973523 - B3 SINE B2 -1 215 4 5 984 449 321 127 23 chr13 52311720 52311735 -67972577 - B4A SINE B4 -8 284 270 5 984 468 111 0 0 chr13 52311735 52311807 -67972505 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 984 449 325 125 22 chr13 52311807 52312037 -67972275 - B4A SINE B4 -23 269 17 5 984 922 303 29 58 chr13 52312227 52312780 -67971532 - L1MA6 LINE L1 -6 6294 5758 5 984 239 240 86 107 chr13 52313481 52313621 -67970691 + Cheshire DNA MER1_type 100 236 -2184 5 984 231 285 132 61 chr13 52313977 52314205 -67970107 - RLTR21 LTR ERVK -266 1306 1063 5 984 621 220 0 17 chr13 52314432 52314552 -67969760 + PB1D7 SINE Alu 3 120 0 5 984 210 280 0 0 chr13 52314552 52314627 -67969685 + GA-rich Low_complexity Low_complexity 2 76 0 5 984 1228 68 0 0 chr13 52314775 52314922 -67969390 - B1_Mus1 SINE Alu -1 147 1 5 984 870 200 95 28 chr13 52315322 52315533 -67968779 - MTD LTR MaLR -2 417 193 5 984 700 243 79 99 chr13 52315622 52315914 -67968398 + B4 SINE B4 5 290 -2 5 984 702 299 11 32 chr13 52316659 52316849 -67967463 - B4 SINE B4 -65 227 42 5 984 360 64 0 0 chr13 52316945 52316992 -67967320 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 984 206 361 12 0 chr13 52319031 52319114 -67965198 + (CA)n Simple_repeat Simple_repeat 2 85 0 5 984 408 123 0 0 chr13 52319127 52319200 -67965112 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 984 431 298 78 62 chr13 52320075 52320254 -67964058 + B4 SINE B4 79 260 -32 5 984 510 17 0 0 chr13 52320254 52320313 -67963999 + (TC)n Simple_repeat Simple_repeat 1 59 0 5 984 351 0 0 0 chr13 52320313 52320351 -67963961 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 984 3413 25 10 0 chr13 52320490 52320882 -67963430 - MTA_Mm LTR MaLR 0 396 1 5 984 826 318 41 51 chr13 52321130 52321425 -67962887 + B4A SINE B4 1 292 0 5 984 274 290 32 11 chr13 52321444 52321538 -67962774 + (CATATA)n Simple_repeat Simple_repeat 4 99 0 5 984 251 250 39 13 chr13 52321556 52321633 -67962679 + (TG)n Simple_repeat Simple_repeat 1 79 0 5 984 225 94 0 0 chr13 52322026 52322058 -67962254 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 984 926 300 50 7 chr13 52322406 52322685 -67961627 + RMER15 LTR ERVL 274 564 -11 5 984 988 323 76 27 chr13 52322690 52322720 -67961592 + MLT1D LTR MaLR 38 67 -438 5 984 748 265 224 3 chr13 52322720 52323019 -67961293 + MLT1A0 LTR MaLR 1 365 0 5 984 988 323 76 27 chr13 52323019 52323434 -67960878 + MLT1D LTR MaLR 68 505 0 5 984 204 40 0 0 chr13 52323527 52323552 -67960760 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 984 324 309 145 106 chr13 52323588 52323946 -67960366 + MLT1A1 LTR MaLR 1 372 -36 5 984 1023 262 58 52 chr13 52324174 52324477 -67959835 - B4 SINE B4 -6 286 2 5 984 387 0 0 0 chr13 52324495 52324538 -67959774 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 984 319 297 105 54 chr13 52324663 52324997 -67959315 - L1M4 LINE L1 -4716 1930 1580 5 984 384 346 97 7 chr13 52325158 52325312 -67959000 - L1M4 LINE L1 -5251 1291 1124 5 984 405 323 101 45 chr13 52325457 52325814 -67958498 - L1M4 LINE L1 -5634 908 532 5 984 1277 108 32 0 chr13 52325825 52326010 -67958302 - B2_Mm2 SINE B2 -3 192 2 5 984 438 345 0 0 chr13 52326296 52326473 -67957839 + (TG)n Simple_repeat Simple_repeat 1 177 0 5 984 2889 148 122 13 chr13 52326481 52327007 -67957305 + RMER4B LTR ERVK 1 583 -2 5 984 2371 138 68 23 chr13 52327169 52327568 -67956744 - MTC LTR MaLR 0 421 5 5 984 405 0 0 0 chr13 52327617 52327662 -67956650 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 984 352 271 0 0 chr13 52327666 52327736 -67956576 - PB1D10 SINE Alu -17 100 31 5 984 575 259 203 17 chr13 52328394 52328626 -67955686 + B4A SINE B4 1 275 -17 5 984 204 67 0 0 chr13 52329082 52329112 -67955200 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 5 984 966 86 57 7 chr13 52329112 52329244 -67955068 - B1_Mus1 SINE Alu -7 141 3 5 984 706 263 0 60 chr13 52330023 52330205 -67954107 - ID_B1 SINE B4 -53 171 1 5 984 248 239 79 32 chr13 52330581 52330797 -67953515 + RLTR21 LTR ERVK 1080 1305 -267 5 984 210 171 0 0 chr13 52330801 52330842 -67953470 + (TATG)n Simple_repeat Simple_repeat 4 44 0 5 984 679 259 40 152 chr13 52330966 52331289 -67953023 - MTE2a LTR MaLR -92 287 1 5 984 396 55 0 0 chr13 52332094 52332149 -67952163 + (CTCA)n Simple_repeat Simple_repeat 2 56 0 5 984 384 22 0 0 chr13 52332149 52332194 -67952118 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 984 636 299 39 89 chr13 52332202 52332476 -67951836 - B4A SINE B4 0 292 9 5 984 210 125 0 48 chr13 52332492 52332534 -67951778 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 5 984 266 206 0 14 chr13 52332544 52332618 -67951694 + CT-rich Low_complexity Low_complexity 4 76 0 5 984 503 237 68 0 chr13 52332631 52332749 -67951563 - B1_Mur1 SINE Alu -21 128 3 5 984 989 259 50 43 chr13 52334225 52334507 -67949805 + B4 SINE B4 5 288 -4 5 984 799 202 81 27 chr13 52335075 52335367 -67948945 + MTD LTR MaLR 1 382 -37 5 984 237 33 0 0 chr13 52335367 52335397 -67948915 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 984 461 185 90 62 chr13 52335397 52335435 -67948877 + MTD LTR MaLR 383 418 -1 5 984 1163 52 0 0 chr13 52335569 52335704 -67948608 + B1_Mm SINE Alu 2 136 -11 5 984 459 0 0 0 chr13 52336222 52336273 -67948039 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 984 216 122 0 0 chr13 52336276 52336317 -67947995 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 5 984 1049 199 33 261 chr13 52336884 52337374 -67946938 - ORR1C1 LTR MaLR 0 378 1 5 984 2974 181 95 23 chr13 52337374 52338536 -67945776 - ORR1C1-int LTR MaLR 0 1509 1 5 984 2323 119 20 75 chr13 52338536 52338734 -67945578 - ORR1C1 LTR MaLR 0 378 177 5 984 468 0 0 0 chr13 52338734 52338786 -67945526 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 984 2323 119 20 75 chr13 52338786 52338987 -67945325 - ORR1C1 LTR MaLR -202 176 1 5 984 2039 205 27 87 chr13 52339679 52340234 -67944078 - RLTR11A LTR ERVK 0 528 7 5 984 8265 47 0 3 chr13 52340346 52341329 -67942983 + L1_Mus1 LINE L1 5588 6567 0 5 984 302 208 0 0 chr13 52341350 52341398 -67942914 + RLTR17 LTR ERVK 231 278 -414 5 984 982 192 16 16 chr13 52341386 52341571 -67942741 + RLTR17 LTR ERVK 508 692 0 5 984 347 0 23 0 chr13 52342008 52342051 -67942261 + (TC)n Simple_repeat Simple_repeat 1 44 0 5 984 525 16 0 0 chr13 52342051 52342112 -67942200 + (CAAAA)n Simple_repeat Simple_repeat 1 62 0 5 984 677 182 58 0 chr13 52342112 52342233 -67942079 - B1_Mur1 SINE Alu -18 131 4 5 984 387 279 50 75 chr13 52342132 52342252 -67942060 - B4A SINE B4 -98 194 78 5 984 351 353 117 56 chr13 52342259 52342670 -67941642 - L1M5 LINE L1 -2387 3759 3324 5 984 902 227 77 0 chr13 52342675 52342869 -67941443 - B3 SINE B2 -7 209 1 6 984 338 340 67 33 chr13 52343139 52343349 -67940963 - L1M5 LINE L1 -2961 3185 2969 5 984 621 144 0 0 chr13 52343400 52343518 -67940794 + (TC)n Simple_repeat Simple_repeat 1 118 0 6 984 375 289 0 58 chr13 52343543 52343646 -67940666 + B3A SINE B2 102 198 0 6 984 294 29 0 0 chr13 52343855 52343890 -67940422 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 984 412 314 84 54 chr13 52344444 52344740 -67939572 - MER45B DNA Tip100 -24 1016 712 6 984 301 324 196 6 chr13 52344824 52345140 -67939172 - MER45B DNA Tip100 -606 434 58 6 984 1222 216 50 123 chr13 52345284 52345681 -67938631 + ORR1D2 LTR MaLR 1 368 -2 6 984 245 168 77 34 chr13 52346450 52346567 -67937745 + (TA)n Simple_repeat Simple_repeat 2 123 0 6 984 480 260 12 167 chr13 52346573 52346818 -67937494 - B3 SINE B2 -9 207 1 6 984 1384 101 0 11 chr13 52347286 52347476 -67936836 + B2_Mm2 SINE B2 3 190 -5 6 984 589 239 153 72 chr13 52347896 52348076 -67936236 + MTD LTR MaLR 2 205 -214 6 984 1202 53 140 6 chr13 52348076 52348247 -67936065 + B2_Mm2 SINE B2 2 195 0 6 984 589 244 132 87 chr13 52348247 52348333 -67935979 + MTD LTR MaLR 192 264 -136 6 984 221 218 18 18 chr13 52348457 52348513 -67935799 + CT-rich Low_complexity Low_complexity 3 58 0 6 984 993 290 45 69 chr13 52348632 52349040 -67935272 + MTE2a LTR MaLR 2 405 -14 6 984 705 225 47 70 chr13 52349146 52349361 -67934951 - B3 SINE B2 -6 210 1 6 984 360 0 0 0 chr13 52350144 52350184 -67934128 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 984 241 260 252 28 chr13 52350588 52350695 -67933617 - B4 SINE B4 -161 131 1 6 984 3141 48 5 15 chr13 52350776 52351179 -67933133 - MTB_Mm LTR MaLR -8 399 1 6 984 350 247 0 12 chr13 52351179 52351261 -67933051 - B3 SINE B2 -14 202 122 6 984 374 372 56 16 chr13 52351263 52351711 -67932601 - L1MD LINE L1 -1490 4656 4191 6 984 654 278 6 12 chr13 52353456 52353620 -67930692 - B4 SINE B4 -4 288 126 6 984 211 125 25 0 chr13 52353685 52353725 -67930587 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 6 984 860 252 70 70 chr13 52353840 52354182 -67930130 + ORR1E LTR MaLR 1 342 -17 6 984 309 236 78 11 chr13 52354592 52354682 -67929630 - L1M6 LINE L1 -6326 170 75 6 984 706 298 61 158 chr13 52354874 52355285 -67929027 - MTE2a LTR MaLR -3 376 6 6 984 180 0 0 0 chr13 52355935 52355955 -67928357 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 984 302 248 78 14 chr13 52357145 52357278 -67927034 + L1MA4 LINE L1 5819 5938 -365 6 984 240 102 49 39 chr13 52357278 52357380 -67926932 + (TG)n Simple_repeat Simple_repeat 1 103 0 6 984 392 266 16 25 chr13 52357577 52357901 -67926411 + G-rich Low_complexity Low_complexity 1 320 0 6 984 24 32 0 0 chr13 52357973 52358004 -67926308 + AT_rich Low_complexity Low_complexity 1 31 0 6 984 564 203 16 71 chr13 52358210 52358337 -67925975 - B1F2 SINE Alu -1 148 29 6 984 351 0 0 0 chr13 52359381 52359420 -67924892 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 984 376 236 170 7 chr13 52359422 52359563 -67924749 + MER2 DNA MER2_type 100 263 -82 6 984 3674 153 19 44 chr13 52359563 52359619 -67924693 - Lx5 LINE L1 -5 7045 6994 6 984 7051 46 36 18 chr13 52359619 52360496 -67923816 - RLTR13B1 LTR ERVK 0 893 1 6 984 3674 153 19 44 chr13 52360496 52361081 -67923231 - Lx5 LINE L1 -57 6993 6420 6 984 8002 143 35 37 chr13 52361069 52362821 -67921491 - Lx5 LINE L1 -781 6269 4514 6 984 395 250 26 26 chr13 52362823 52362938 -67921374 - PB1D10 SINE Alu -1 116 2 6 984 21 36 0 0 chr13 52363475 52363503 -67920809 + AT_rich Low_complexity Low_complexity 1 28 0 6 984 294 316 25 0 chr13 52364124 52364203 -67920109 + B4A SINE B4 150 230 -62 6 984 307 193 11 11 chr13 52365314 52365403 -67918909 + (TG)n Simple_repeat Simple_repeat 1 89 0 6 984 429 261 63 0 chr13 52365405 52365516 -67918796 - RSINE1 SINE B4 -1 164 47 6 984 206 105 26 0 chr13 52365554 52365592 -67918720 + (TTATA)n Simple_repeat Simple_repeat 5 43 0 6 984 24 67 0 0 chr13 52365609 52365654 -67918658 + AT_rich Low_complexity Low_complexity 1 45 0 6 984 224 250 78 0 chr13 52365882 52365946 -67918366 - L2 LINE L2 -790 2629 2561 6 984 241 349 55 15 chr13 52366007 52366208 -67918104 + L1MCb LINE L1 777 985 -5060 6 984 531 247 186 6 chr13 52366212 52366332 -67917980 + B3A SINE B2 1 145 -53 6 984 234 0 0 0 chr13 52366332 52366358 -67917954 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 984 531 247 186 6 chr13 52366358 52366404 -67917908 + B3A SINE B2 146 196 -2 6 984 423 96 31 21 chr13 52366976 52367072 -67917240 + (CAGAGA)n Simple_repeat Simple_repeat 4 100 0 6 984 310 289 11 46 chr13 52367082 52367169 -67917143 + RSINE1 SINE B4 19 102 -63 6 984 360 200 0 0 chr13 52367257 52367332 -67916980 + (TA)n Simple_repeat Simple_repeat 2 76 0 6 984 3545 172 105 89 chr13 52367428 52367905 -67916407 + RMER13A LTR ERVK 1 535 -325 6 984 3260 50 0 22 chr13 52367905 52368314 -67915998 + MTB LTR MaLR 1 400 0 6 984 3545 172 105 89 chr13 52368314 52368682 -67915630 + RMER13A LTR ERVK 536 860 0 6 984 751 228 0 125 chr13 52368790 52369006 -67915306 - B3A SINE B2 -6 192 4 6 984 240 300 14 0 chr13 52369166 52369236 -67915076 + RSINE1 SINE B4 3 73 -92 6 984 191 114 29 0 chr13 52369939 52369974 -67914338 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 984 646 220 49 25 chr13 52370081 52370244 -67914068 - B3 SINE B2 -6 210 44 6 984 753 275 29 62 chr13 52370254 52370498 -67913814 - B4A SINE B4 -55 237 2 6 984 244 197 145 43 chr13 52371934 52372003 -67912309 + B1F SINE Alu 74 149 0 6 984 675 271 31 53 chr13 52372333 52372653 -67911659 + RLTR15 LTR ERVK 33 345 -14 6 984 195 273 113 66 chr13 52373017 52373123 -67911189 + L2 LINE L2 1742 1852 -1567 6 984 367 149 49 10 chr13 52373229 52373331 -67910981 + CT-rich Low_complexity Low_complexity 1 106 0 6 984 998 113 17 11 chr13 52373331 52373510 -67910802 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 6 984 288 0 0 0 chr13 52373510 52373542 -67910770 + (TTCC)n Simple_repeat Simple_repeat 1 32 0 6 984 680 283 47 28 chr13 52373762 52374016 -67910296 + RMER15 LTR ERVL 299 557 -18 6 984 373 221 62 53 chr13 52374335 52374509 -67909803 + ORR1E LTR MaLR 1 153 -193 6 984 666 238 121 12 chr13 52375055 52375221 -67909091 + B3 SINE B2 1 184 -32 6 984 1627 189 30 13 chr13 52375234 52375535 -67908777 + RMER19C LTR ERVK 304 609 -2 6 984 327 321 45 56 chr13 52375535 52375675 -67908637 + MLT1B LTR MaLR 253 390 0 6 984 1148 278 37 58 chr13 52375792 52375999 -67908313 - MTE2b LTR MaLR 0 379 175 6 984 795 75 0 0 chr13 52375999 52376106 -67908206 + (TCC)n Simple_repeat Simple_repeat 3 109 0 6 984 369 0 0 0 chr13 52376111 52376152 -67908160 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 984 1141 252 44 60 chr13 52376153 52376537 -67907775 + MTE2a LTR MaLR 2 379 0 6 984 1148 278 37 58 chr13 52376537 52376703 -67907609 - MTE2b LTR MaLR -210 169 6 6 984 252 0 0 0 chr13 52376799 52376827 -67907485 + (TCTG)n Simple_repeat Simple_repeat 3 30 0 6 984 845 242 19 38 chr13 52377510 52377720 -67906592 + B4 SINE B4 8 213 -79 6 984 270 0 0 0 chr13 52377720 52377750 -67906562 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 6 984 393 110 0 0 chr13 52377805 52377878 -67906434 + (CA)n Simple_repeat Simple_repeat 2 74 0 6 984 188 212 87 43 chr13 52377923 52377992 -67906320 - L2 LINE L2 -1052 2367 2296 6 984 213 345 11 11 chr13 52377977 52378068 -67906244 - MIR3 SINE MIR -17 191 101 6 984 846 150 0 0 chr13 52378181 52378334 -67905978 + (TG)n Simple_repeat Simple_repeat 1 153 0 6 984 432 0 0 0 chr13 52378338 52378386 -67905926 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 984 25 0 0 0 chr13 52378446 52378471 -67905841 + GC_rich Low_complexity Low_complexity 1 25 0 6 984 324 306 37 12 chr13 52378992 52379110 -67905202 - MTE2b LTR MaLR -7 372 252 6 984 255 301 9 88 chr13 52379337 52379450 -67904862 - B4 SINE B4 -184 108 5 6 984 884 283 96 27 chr13 52380897 52381198 -67903114 + Tigger7 DNA MER2_type 1 322 -2169 6 984 394 290 9 45 chr13 52382092 52382204 -67902108 + B3A SINE B2 44 151 -47 6 984 582 54 0 0 chr13 52382268 52382342 -67901970 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 984 487 322 73 15 chr13 52382393 52382598 -67901714 + MER2 DNA MER2_type 41 257 -88 6 984 797 211 88 153 chr13 52383096 52383404 -67900908 - B4 SINE B4 0 292 5 6 984 342 0 0 0 chr13 52384254 52384292 -67900020 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 984 228 67 0 0 chr13 52384360 52384390 -67899922 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 984 423 339 80 21 chr13 52384619 52384857 -67899455 + MLT2B2 LTR ERVL 5 256 -259 6 984 3154 16 5 8 chr13 52384887 52385255 -67899057 - IAPLTR1_Mm LTR ERVK 0 367 1 6 984 29526 19 1 2 chr13 52385255 52388530 -67895782 - IAPEz-int LTR ERVK 0 6481 3210 6 984 8601 65 62 20 chr13 52388529 52389779 -67894533 - IAPEz-int LTR ERVK -5168 1313 67 6 984 1041 86 159 0 chr13 52389750 52389913 -67894399 - IAPEz-int LTR ERVK -6285 196 8 6 984 3135 16 5 8 chr13 52389913 52390281 -67894031 - IAPLTR1_Mm LTR ERVK 0 367 1 6 984 541 210 32 16 chr13 52390411 52390661 -67893651 + (TCTA)n Simple_repeat Simple_repeat 1 253 0 6 984 287 164 109 0 chr13 52390898 52390953 -67893359 + RSINE1 SINE B4 3 63 -102 6 984 288 0 0 0 chr13 52391100 52391132 -67893180 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6 984 494 289 6 13 chr13 52391133 52391291 -67893021 + L1MA4 LINE L1 5767 5923 -377 6 984 448 268 63 7 chr13 52391559 52391702 -67892610 - L1M4 LINE L1 -521 5663 5513 6 984 248 311 8 56 chr13 52391713 52391839 -67892473 - L1M4 LINE L1 -703 5461 5342 6 984 265 339 24 16 chr13 52391906 52392032 -67892280 + L1M3 LINE L1 2704 2830 -3310 6 984 284 290 46 29 chr13 52392166 52392340 -67891972 + L1M3 LINE L1 3000 3176 -2964 6 984 737 263 0 17 chr13 52392450 52392624 -67891688 - B3A SINE B2 -26 172 2 6 984 494 274 41 68 chr13 52392833 52393052 -67891260 + L1MB1 LINE L1 5796 6008 -181 6 984 923 237 22 116 chr13 52393218 52393538 -67890774 + B4A SINE B4 2 291 -1 6 984 291 28 0 0 chr13 52394354 52394390 -67889922 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 984 683 206 0 8 chr13 52394390 52394522 -67889790 - B3A SINE B2 -57 141 11 7 984 486 299 70 95 chr13 52394540 52394825 -67889487 + B4A SINE B4 7 284 -8 7 984 34 78 0 19 chr13 52395954 52396034 -67888278 + AT_rich Low_complexity Low_complexity 1 80 0 7 984 3247 55 2 2 chr13 52396034 52396434 -67887878 - MTB LTR MaLR 0 400 1 7 984 34 78 0 19 chr13 52396434 52396458 -67887854 + AT_rich Low_complexity Low_complexity 1 23 0 7 984 237 263 26 26 chr13 52396775 52396853 -67887459 + MTEb LTR MaLR 302 379 0 7 984 3177 184 109 69 chr13 52399248 52400104 -67884208 - RMER19B LTR ERVK -12 890 1 7 984 287 256 11 58 chr13 52400104 52400180 -67884132 + RMER15 LTR ERVL 410 481 -94 7 984 217 274 0 24 chr13 52400463 52400549 -67883763 + B2_Mm2 SINE B2 1 80 -136 7 984 1598 170 32 24 chr13 52400549 52400887 -67883425 - ORR1C1 LTR MaLR 0 378 38 7 984 293 133 0 0 chr13 52400984 52401029 -67883283 - ORR1C1 LTR MaLR -324 60 16 7 984 1486 199 62 3 chr13 52401029 52401321 -67882991 - Lx6 LINE L1 -5 7455 7147 7 984 362 239 82 41 chr13 52401339 52401461 -67882851 + B3 SINE B2 89 215 -1 7 984 764 246 24 0 chr13 52401808 52401975 -67882337 - ID_B1 SINE B4 -53 171 1 7 984 558 151 12 25 chr13 52402767 52402930 -67881382 + (TCTCTG)n Simple_repeat Simple_repeat 2 162 0 7 984 552 289 25 0 chr13 52403892 52404013 -67880299 + RSINE1 SINE B4 34 157 -8 7 984 2417 137 36 16 chr13 52404045 52404431 -67879881 + ORR1B1 LTR MaLR 1 394 0 7 984 773 219 0 36 chr13 52404753 52404919 -67879393 + MTE2b LTR MaLR 205 364 -15 7 984 256 239 0 69 chr13 52405200 52405272 -67879040 - RLTR22_Mur LTR ERVK -161 1687 1621 7 984 202 262 0 0 chr13 52405286 52405328 -67878984 + G-rich Low_complexity Low_complexity 1 42 0 7 984 1913 231 58 119 chr13 52405516 52406362 -67877950 - RLTR22_Mur LTR ERVK -1039 809 16 7 984 730 257 131 20 chr13 52406412 52406664 -67877648 + MTEa LTR MaLR 18 295 -84 7 984 183 114 0 0 chr13 52406969 52407004 -67877308 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 7 984 616 92 139 16 chr13 52407443 52407565 -67876747 - ORR1C2 LTR MaLR -247 137 1 7 984 24 53 0 0 chr13 52408410 52408448 -67875864 + AT_rich Low_complexity Low_complexity 1 38 0 7 984 273 308 28 28 chr13 52408820 52408927 -67875385 - B4A SINE B4 -171 121 15 7 984 608 285 78 4 chr13 52408982 52409225 -67875087 + L1MC LINE L1 3507 3767 -2379 7 984 1071 139 113 5 chr13 52409296 52409499 -67874813 + URR1A DNA MER1_type 2 226 0 7 984 466 279 129 0 chr13 52409516 52409663 -67874649 + B3A SINE B2 2 167 -31 7 984 342 0 0 0 chr13 52409669 52409707 -67874605 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 984 517 263 62 139 chr13 52409714 52409889 -67874423 + B3 SINE B2 1 185 -31 7 984 470 17 17 0 chr13 52409889 52409948 -67874364 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 984 399 263 62 139 chr13 52409948 52409980 -67874332 + B2_Mm2 SINE B2 164 192 -3 7 984 302 307 128 0 chr13 52409995 52410233 -67874079 + L1MC LINE L1 3837 4107 -2039 7 984 314 234 32 0 chr13 52410693 52410787 -67873525 + CT-rich Low_complexity Low_complexity 1 97 0 7 984 394 318 160 10 chr13 52410793 52410993 -67873319 + MLT1A1 LTR MaLR 172 401 -7 7 984 180 0 0 0 chr13 52411203 52411223 -67873089 + (T)n Simple_repeat Simple_repeat 1 20 0 7 984 504 309 12 18 chr13 52411418 52411583 -67872729 + RSINE1 SINE B4 1 164 -1 7 984 476 288 12 48 chr13 52412367 52412535 -67871777 + B4 SINE B4 123 284 -8 7 984 486 240 0 0 chr13 52412618 52412789 -67871523 + (CA)n Simple_repeat Simple_repeat 1 171 0 7 984 385 303 51 13 chr13 52412928 52413085 -67871227 - ID_B1 SINE B4 -60 164 2 7 984 963 308 50 70 chr13 52413665 52414007 -67870305 + RMER1C Other Other 37 472 -870 7 984 234 0 0 0 chr13 52414007 52414033 -67870279 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 984 3288 228 74 40 chr13 52414033 52415370 -67868942 + RMER1B Other Other 43 1055 -11 7 984 641 47 12 0 chr13 52415370 52415455 -67868857 + (GA)n Simple_repeat Simple_repeat 1 86 0 7 984 237 340 18 9 chr13 52415595 52415705 -67868607 + B4 SINE B4 168 278 -14 7 984 669 142 0 0 chr13 52415738 52415893 -67868419 + (CA)n Simple_repeat Simple_repeat 1 155 0 7 984 342 67 0 0 chr13 52415893 52415938 -67868374 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 984 635 256 321 0 chr13 52416020 52416282 -67868030 - ORR1D2 LTR MaLR 0 370 25 7 984 243 0 0 0 chr13 52416547 52416574 -67867738 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 984 188 212 84 36 chr13 52416794 52416877 -67867435 - MIRb SINE MIR -155 107 21 7 984 303 283 8 66 chr13 52417449 52417570 -67866742 - B3 SINE B2 -27 189 76 7 984 1280 97 16 21 chr13 52418036 52418225 -67866087 + B2_Mm2 SINE B2 1 188 -7 7 984 468 182 55 90 chr13 52419488 52419633 -67864679 - ORR1D1 LTR MaLR -2 372 233 7 984 1121 67 21 5 chr13 52419967 52420140 -67864172 + ORR1A0 LTR MaLR 32 209 -158 7 984 461 190 34 11 chr13 52420390 52420566 -67863746 + (TCTG)n Simple_repeat Simple_repeat 1 180 0 7 984 342 0 0 0 chr13 52420571 52420609 -67863703 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 984 264 267 17 0 chr13 52420609 52420669 -67863643 + (CGTG)n Simple_repeat Simple_repeat 1 61 0 7 984 346 348 25 0 chr13 52420688 52420806 -67863506 - B4A SINE B4 -8 284 164 7 984 1684 215 87 26 chr13 52420806 52421272 -67863040 - RLTR11A2 LTR ERVK 0 527 26 7 984 3124 20 0 0 chr13 52421272 52421618 -67862694 + ORR1A0 LTR MaLR 1 346 0 7 984 1684 215 87 26 chr13 52421618 52421644 -67862668 - RLTR11A2 LTR ERVK -502 25 5 7 984 223 300 17 0 chr13 52421670 52421730 -67862582 - B1_Mur3 SINE Alu -88 61 1 7 984 608 250 13 4 chr13 52421731 52421893 -67862419 + ORR1D1 LTR MaLR 9 166 -212 7 984 486 0 0 0 chr13 52421893 52421947 -67862365 + (TC)n Simple_repeat Simple_repeat 1 54 0 7 984 552 278 11 39 chr13 52421947 52421964 -67862348 + ORR1D1 LTR MaLR 167 183 -195 7 984 285 29 0 0 chr13 52421964 52421998 -67862314 + (TCC)n Simple_repeat Simple_repeat 2 35 0 7 984 447 170 0 11 chr13 52422010 52422105 -67862207 + ORR1D1 LTR MaLR 167 260 -114 7 984 425 344 147 19 chr13 52422570 52422938 -67861374 + Tigger7 DNA MER2_type 24 438 -2053 7 984 239 322 127 10 chr13 52423623 52423815 -67860497 - B4A SINE B4 -77 215 1 7 984 22 0 0 0 chr13 52423825 52423847 -67860465 + AT_rich Low_complexity Low_complexity 1 22 0 7 984 378 0 0 0 chr13 52424502 52424544 -67859768 + (TC)n Simple_repeat Simple_repeat 1 42 0 7 984 333 0 0 0 chr13 52424544 52424581 -67859731 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 984 1309 276 66 22 chr13 52424886 52425386 -67858926 - RMER5 LTR ERV1 0 534 13 7 984 385 222 100 100 chr13 52425709 52425839 -67858473 + B4 SINE B4 145 274 -18 7 984 477 0 0 0 chr13 52425842 52425895 -67858417 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 984 402 21 0 0 chr13 52425895 52425941 -67858371 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 984 244 298 32 0 chr13 52426020 52426114 -67858198 + L1ME1 LINE L1 5907 6003 -176 7 984 2598 73 0 12 chr13 52426157 52426488 -67857824 + ORR1A2 LTR MaLR 1 327 0 7 984 551 263 43 49 chr13 52427182 52427366 -67856946 + B4A SINE B4 88 270 -22 7 984 273 195 25 35 chr13 52427373 52427576 -67856736 + (TA)n Simple_repeat Simple_repeat 1 200 0 7 984 215 216 13 26 chr13 52427594 52427670 -67856642 + (TA)n Simple_repeat Simple_repeat 1 75 0 7 984 334 295 162 25 chr13 52427835 52428020 -67856292 - B3A SINE B2 -9 207 1 7 984 308 304 144 50 chr13 52428064 52428341 -67855971 - L1MDa LINE L1 -4755 1878 1576 7 984 324 0 0 0 chr13 52428438 52428474 -67855838 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 7 984 1191 56 0 0 chr13 52428474 52428618 -67855694 - B1_Mus2 SINE Alu -3 144 1 7 985 529 329 98 35 chr13 52429662 52429917 -67854395 + B4 SINE B4 2 272 -20 7 985 486 0 0 0 chr13 52429963 52430017 -67854295 + (GA)n Simple_repeat Simple_repeat 1 54 0 7 985 208 239 34 0 chr13 52430026 52430114 -67854198 + G-rich Low_complexity Low_complexity 3 93 0 7 985 32 0 0 0 chr13 52430755 52430787 -67853525 + AT_rich Low_complexity Low_complexity 1 32 0 7 985 313 125 45 11 chr13 52430820 52430909 -67853403 + (TA)n Simple_repeat Simple_repeat 1 92 0 7 985 2804 49 0 14 chr13 52430911 52431282 -67853030 + MTB LTR MaLR 1 366 -34 7 985 351 0 0 0 chr13 52431282 52431321 -67852991 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 985 661 290 46 15 chr13 52431324 52431409 -67852903 - B3 SINE B2 -9 207 117 7 985 3177 14 0 0 chr13 52431409 52431755 -67852557 - ORR1A0 LTR MaLR 0 346 1 7 985 661 290 46 15 chr13 52431755 52431865 -67852447 - B3 SINE B2 -100 116 6 7 985 418 283 230 0 chr13 52432193 52432384 -67851928 - MTE2b LTR MaLR -4 375 141 7 985 659 249 109 94 chr13 52432498 52432764 -67851548 + B4 SINE B4 2 271 -21 7 985 206 294 0 0 chr13 52432776 52432827 -67851485 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 985 311 336 5 0 chr13 52433035 52433142 -67851170 - PB1D10 SINE Alu -38 111 1 7 985 544 220 12 78 chr13 52433464 52433647 -67850665 - B3A SINE B2 -22 176 5 7 985 565 247 25 25 chr13 52434198 52434356 -67849956 + RMER15 LTR ERVL 389 546 -29 7 985 390 279 90 0 chr13 52434378 52434500 -67849812 - B4A SINE B4 -143 149 17 7 985 349 301 66 22 chr13 52434952 52435088 -67849224 + B4A SINE B4 2 143 -149 7 985 205 296 25 0 chr13 52435171 52435252 -67849060 + (CA)n Simple_repeat Simple_repeat 1 83 0 7 985 219 114 0 0 chr13 52435755 52435790 -67848522 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 7 985 494 218 199 26 chr13 52436243 52436474 -67847838 - B4A SINE B4 -17 275 5 7 985 761 271 72 54 chr13 52436514 52436714 -67847598 + B4A SINE B4 9 214 -78 7 985 261 0 0 0 chr13 52436714 52436743 -67847569 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 985 761 271 72 54 chr13 52436743 52436819 -67847493 + B4A SINE B4 215 290 -2 7 985 1062 53 35 0 chr13 52436824 52436995 -67847317 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 7 985 965 92 0 7 chr13 52437160 52437303 -67847009 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 7 985 252 0 0 0 chr13 52437873 52437901 -67846411 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 8 985 636 239 122 48 chr13 52438221 52438410 -67845902 + B3 SINE B2 2 204 -12 8 985 184 370 39 8 chr13 52439210 52439338 -67844974 + MIRb SINE MIR 114 245 -23 8 985 1034 105 0 12 chr13 52439405 52439556 -67844756 + (GGA)n Simple_repeat Simple_repeat 3 153 0 8 985 1284 89 0 0 chr13 52439556 52439736 -67844576 + (GAA)n Simple_repeat Simple_repeat 1 180 0 8 985 1034 105 0 12 chr13 52439736 52439748 -67844564 + (GGA)n Simple_repeat Simple_repeat 1 11 0 8 985 251 226 0 35 chr13 52439743 52439830 -67844482 + G-rich Low_complexity Low_complexity 3 86 0 8 985 519 223 96 64 chr13 52439877 52440097 -67844215 + RMER5 LTR ERV1 71 297 -237 8 985 282 115 0 0 chr13 52440205 52440257 -67844055 + (TG)n Simple_repeat Simple_repeat 1 52 0 8 985 570 279 31 12 chr13 52441798 52441958 -67842354 + B3A SINE B2 1 163 -35 8 985 252 86 0 0 chr13 52441970 52442005 -67842307 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 985 1583 161 73 29 chr13 52442026 52442194 -67842118 + RMER17C LTR ERVK 1 182 -228 8 985 1249 67 0 16 chr13 52442194 52442377 -67841935 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 8 985 1583 161 73 29 chr13 52442377 52442591 -67841721 + RMER17C LTR ERVK 183 400 -10 8 985 658 276 166 19 chr13 52443487 52443801 -67840511 - MLT1A0 LTR MaLR -3 362 3 8 985 288 326 10 10 chr13 52444437 52444533 -67839779 - MER68-int LTR ERVL -532 2458 2363 8 985 264 236 83 0 chr13 52445079 52445151 -67839161 + MLT2B5 LTR ERVL 322 399 -156 8 985 1038 169 119 0 chr13 52445249 52445468 -67838844 + RLTR40 LTR ERVK 2 246 -571 8 985 369 0 0 0 chr13 52445468 52445509 -67838803 + (TTA)n Simple_repeat Simple_repeat 2 42 0 8 985 7342 96 18 8 chr13 52445509 52446524 -67837788 - Lx LINE L1 -15 6639 5615 8 985 1435 179 105 61 chr13 52446524 52446916 -67837396 + RLTR40 LTR ERVK 233 641 -176 8 985 207 100 0 0 chr13 52446916 52446946 -67837366 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 8 985 2190 128 2 87 chr13 52448470 52448872 -67835440 + RLTR9A LTR ERVK 1 368 0 8 985 1618 103 4 60 chr13 52449014 52449283 -67835029 + MTB_Mm LTR MaLR 154 407 0 8 985 418 279 76 23 chr13 52449384 52449516 -67834796 + B4 SINE B4 127 265 -27 8 985 1781 171 28 34 chr13 52449676 52450033 -67834279 + RLTR14 LTR ERV1 9 363 -19 8 985 893 197 32 55 chr13 52450956 52451107 -67833205 + B3 SINE B2 2 158 -58 8 985 2440 145 19 2 chr13 52451107 52451522 -67832790 - BGLII_Mus LTR ERVK 0 422 1 8 985 893 197 32 55 chr13 52451522 52451554 -67832758 + B3 SINE B2 159 184 -32 8 985 4608 47 18 7 chr13 52451554 52452112 -67832200 + LTRIS2 LTR ERV1 1 564 0 8 985 893 197 32 55 chr13 52452112 52452147 -67832165 + B3 SINE B2 185 216 0 8 985 967 240 30 34 chr13 52452285 52452618 -67831694 + MT2A LTR ERVL 22 527 -74 8 985 3320 119 80 42 chr13 52452618 52452885 -67831427 + RMER6A LTR ERVK 1 285 -471 8 985 830 0 36 0 chr13 52452885 52452995 -67831317 + (GA)n Simple_repeat Simple_repeat 2 115 0 8 985 3320 119 80 42 chr13 52452995 52453393 -67830919 + RMER6A LTR ERVK 286 690 -66 8 985 975 273 31 35 chr13 52454299 52454587 -67829725 - B4 SINE B4 -4 288 2 8 985 2973 71 18 5 chr13 52454626 52455024 -67829288 - RLTR9D LTR ERVK 0 403 1 8 985 262 271 99 25 chr13 52455637 52455758 -67828554 + RMER15 LTR ERVL 399 528 -47 8 985 1285 250 65 56 chr13 52456139 52456660 -67827652 + RMER5 LTR ERV1 1 526 -8 8 985 247 336 8 8 chr13 52456959 52457076 -67827236 + (TG)n Simple_repeat Simple_repeat 2 118 0 8 985 357 258 82 0 chr13 52457317 52457414 -67826898 + B4A SINE B4 85 189 -103 8 985 187 288 34 0 chr13 52458476 52458535 -67825777 + MIR3 SINE MIR 140 200 -8 8 985 211 283 90 10 chr13 52458816 52458916 -67825396 + RSINE1 SINE B4 3 110 -55 8 985 539 281 88 97 chr13 52459475 52459837 -67824475 + MTEb LTR MaLR 2 360 -19 8 985 1674 262 68 75 chr13 52461210 52462044 -67822268 + L1_Rod LINE L1 3798 4625 -1222 8 985 279 0 0 0 chr13 52462138 52462169 -67822143 + (T)n Simple_repeat Simple_repeat 1 31 0 8 985 967 61 114 0 chr13 52462169 52462301 -67822011 - B1_Mus2 SINE Alu 0 147 1 8 985 8141 61 24 5 chr13 52462335 52463918 -67820394 - L1VL2 LINE L1 -1586 2029 417 8 985 2486 212 175 48 chr13 52464551 52465543 -67818769 - RMER1B Other Other -9 1057 45 8 985 1069 244 87 40 chr13 52465548 52466030 -67818282 - RMER1B Other Other -553 513 13 8 985 1171 124 53 79 chr13 52466534 52466761 -67817551 + URR1B DNA MER1_type 1 221 -4 8 985 213 286 43 150 chr13 52467971 52468111 -67816201 + ID_B1 SINE B4 100 224 0 8 985 268 190 51 153 chr13 52470437 52470574 -67813738 - RLTR42-int LTR ERVK -1978 4159 4037 8 985 355 200 8 132 chr13 52470959 52471080 -67813232 - RLTR42-int LTR ERVK -3085 3052 2947 8 985 833 254 61 91 chr13 52471209 52471228 -67813084 - RLTR42-int LTR ERVK -3277 2860 2847 8 985 369 0 0 0 chr13 52471228 52471269 -67813043 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 985 833 254 61 91 chr13 52471269 52471755 -67812557 - RLTR42-int LTR ERVK -3291 2846 2370 8 985 871 190 20 20 chr13 52471805 52472004 -67812308 - RLTR42-int LTR ERVK -3395 2127 1929 8 985 488 194 30 30 chr13 52472005 52472106 -67812206 - RLTR42-int LTR ERVK -3554 1968 1868 8 985 22 0 0 0 chr13 52472386 52472408 -67811904 + AT_rich Low_complexity Low_complexity 1 22 0 8 985 23 0 0 0 chr13 52472434 52472457 -67811855 + AT_rich Low_complexity Low_complexity 1 23 0 8 985 325 236 11 11 chr13 52472898 52472988 -67811324 - RLTR42-int LTR ERVK -3504 2018 1929 8 985 342 161 32 0 chr13 52472989 52473051 -67811261 - RLTR42-int LTR ERVK -3554 1968 1905 8 985 314 120 80 0 chr13 52473241 52473291 -67811021 - RLTR42-int LTR ERVK -4424 1098 1045 8 985 227 0 44 44 chr13 52473649 52473694 -67810618 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 8 985 2166 178 189 25 chr13 52474222 52474747 -67809565 - RMER19C LTR ERVK 0 611 1 8 985 430 221 33 79 chr13 52475475 52475627 -67808685 - RLTR15 LTR ERVK -214 145 1 8 985 585 199 11 2 chr13 52475627 52475741 -67808571 - MTEa LTR MaLR -59 320 206 8 985 212 296 0 0 chr13 52475743 52475797 -67808515 + G-rich Low_complexity Low_complexity 3 56 0 8 985 410 312 12 92 chr13 52475803 52475976 -67808336 - MTEa LTR MaLR -220 159 1 8 985 250 282 0 25 chr13 52476216 52476296 -67808016 + CT-rich Low_complexity Low_complexity 3 80 0 8 985 336 256 22 11 chr13 52476398 52476489 -67807823 - B4 SINE B4 -114 178 87 8 985 207 0 0 0 chr13 52477152 52477175 -67807137 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 985 1157 29 15 0 chr13 52477175 52477312 -67807000 - B1_Mus2 SINE Alu -8 139 1 8 985 3036 21 0 0 chr13 52477462 52477799 -67806513 - IAPLTR1a_Mm LTR ERVK 0 337 1 8 985 56677 21 16 7 chr13 52477799 52484216 -67800096 - IAPEz-int LTR ERVK 0 6481 8 8 985 3050 18 0 0 chr13 52484216 52484553 -67799759 - IAPLTR1a_Mm LTR ERVK 0 337 1 8 985 1021 182 44 94 chr13 52485510 52485849 -67798463 - RLTRETN_Mm LTR ERVK 0 322 1 8 985 2306 176 77 122 chr13 52485971 52486413 -67797899 + RMER19C LTR ERVK 2 399 -212 8 985 270 0 0 0 chr13 52486413 52486443 -67797869 + (CTG)n Simple_repeat Simple_repeat 1 30 0 8 985 2306 176 77 122 chr13 52486443 52486639 -67797673 + RMER19C LTR ERVK 400 610 -1 8 985 296 195 169 0 chr13 52486733 52486810 -67797502 + MLT1A0 LTR MaLR 226 315 -50 8 985 603 320 56 78 chr13 52487089 52487291 -67797021 - B4 SINE B4 -1 291 97 8 985 2195 137 117 3 chr13 52487291 52487643 -67796669 - ORR1B1 LTR MaLR -2 392 1 8 985 603 320 56 78 chr13 52487643 52487708 -67796604 - B4 SINE B4 -196 96 30 8 985 258 203 51 0 chr13 52487892 52487951 -67796361 + RMER30 DNA MER1_type 9 70 -132 8 985 328 224 29 58 chr13 52488011 52488115 -67796197 + RMER30 DNA MER1_type 84 184 -18 8 985 578 288 99 35 chr13 52488221 52488505 -67795807 + Lx8 LINE L1 6970 7271 -202 8 985 934 223 29 14 chr13 52488666 52488875 -67795437 + B3 SINE B2 3 214 -2 8 985 2090 101 3 3 chr13 52489980 52490298 -67794014 - ORR1A3 LTR MaLR -8 318 1 8 985 209 211 18 0 chr13 52490897 52490954 -67793358 + GA-rich Low_complexity Low_complexity 1 58 0 8 985 234 0 0 0 chr13 52491732 52491758 -67792554 + (CA)n Simple_repeat Simple_repeat 2 27 0 8 985 950 281 100 79 chr13 52491769 52492290 -67792022 + MT2A LTR ERVL 2 533 0 8 985 1297 47 0 0 chr13 52492414 52492583 -67791729 + B2_Mm2 SINE B2 1 169 -26 8 985 1065 129 0 0 chr13 52492587 52492758 -67791554 + (GAA)n Simple_repeat Simple_repeat 2 172 0 8 985 806 249 97 64 chr13 52493762 52494123 -67790189 - RLTR14 LTR ERV1 -1 381 9 8 985 296 109 0 0 chr13 52494933 52494979 -67789333 - MT2A LTR ERVL -2 531 486 8 985 941 243 209 101 chr13 52494979 52495396 -67788916 + MT2A LTR ERVL 1 462 -71 8 985 1844 165 41 3 chr13 52495405 52495746 -67788566 + ORR1C2 LTR MaLR 1 354 -30 8 985 1207 204 330 19 chr13 52495745 52496111 -67788201 - MT2A LTR ERVL -53 480 1 8 985 389 256 162 0 chr13 52496146 52496261 -67788051 + RSINE1 SINE B4 5 138 -27 8 985 545 219 41 46 chr13 52496261 52496454 -67787858 + RMER19B LTR ERVK 1 169 -568 8 985 1106 65 0 0 chr13 52496781 52496920 -67787392 + B1_Mus1 SINE Alu 2 140 -8 8 985 264 77 0 0 chr13 52496920 52496959 -67787353 + (CAA)n Simple_repeat Simple_repeat 2 40 0 8 985 1984 133 86 7 chr13 52497075 52497378 -67786934 + ORR1A2 LTR MaLR 1 327 0 8 985 576 186 0 0 chr13 52497381 52497494 -67786818 + (TA)n Simple_repeat Simple_repeat 1 113 0 8 985 260 229 217 0 chr13 52497532 52497615 -67786697 + L1M5 LINE L1 5336 5436 -737 8 985 555 271 8 15 chr13 52497640 52497771 -67786541 + B4A SINE B4 57 186 -106 8 985 1462 190 63 21 chr13 52497788 52497901 -67786411 - RLTR14 LTR ERV1 -32 350 243 8 985 354 61 0 0 chr13 52497901 52497950 -67786362 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 985 1462 190 63 21 chr13 52497950 52498170 -67786142 - RLTR14 LTR ERV1 -140 242 5 8 985 5399 146 95 11 chr13 52498173 52499247 -67785065 - RLTR14-int LTR ERV1 -1 5316 4153 8 985 396 210 0 12 chr13 52499248 52499330 -67784982 - RLTR14 LTR ERV1 -301 81 1 8 985 1805 165 6 18 chr13 52499370 52499710 -67784602 + ORR1B1 LTR MaLR 41 376 -18 8 985 185 0 40 0 chr13 52499748 52499773 -67784539 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 8 985 1145 176 83 5 chr13 52499783 52500000 -67784312 - RLTR14-int LTR ERV1 -2128 3189 2956 8 985 2239 144 28 42 chr13 52500000 52500400 -67783912 - RLTR14-int LTR ERV1 -2362 2955 2562 1 985 3612 206 48 47 chr13 52500420 52501251 -67783061 - RLTR14-int LTR ERV1 -3270 2047 1216 1 985 3502 160 53 64 chr13 52501274 52501976 -67782336 - RLTR14-int LTR ERV1 -4029 1288 595 1 985 799 161 31 0 chr13 52502058 52502219 -67782093 - RLTR14-int LTR ERV1 -4767 550 385 1 985 573 160 0 0 chr13 52502219 52502363 -67781949 + GA-rich Low_complexity Low_complexity 1 144 0 2 985 1689 240 22 40 chr13 52502372 52502819 -67781493 - RLTR14-int LTR ERV1 -4878 439 1 1 985 875 192 10 103 chr13 52502819 52503022 -67781290 - RLTR14 LTR ERV1 -3 379 196 1 985 311 192 93 27 chr13 52503006 52503081 -67781231 + B4A SINE B4 211 290 -2 3 985 679 90 36 0 chr13 52503114 52503225 -67781087 + (TATG)n Simple_repeat Simple_repeat 2 116 0 4 985 372 246 93 43 chr13 52503407 52503547 -67780765 + MLT1A1 LTR MaLR 262 408 0 5 985 740 239 38 46 chr13 52505648 52505890 -67778422 + B3A SINE B2 1 216 0 6 985 378 305 78 20 chr13 52505991 52506195 -67778117 - MLT1A0 LTR MaLR -143 222 7 7 985 1125 231 35 15 chr13 52507780 52508039 -67776273 + MTEa LTR MaLR 3 266 -113 8 985 779 156 0 22 chr13 52508182 52508366 -67775946 + (CA)n Simple_repeat Simple_repeat 1 180 0 9 985 717 186 11 9 chr13 52508378 52508735 -67775577 + (CA)n Simple_repeat Simple_repeat 1 357 0 9 985 494 91 13 0 chr13 52508738 52508815 -67775497 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 985 650 296 30 41 chr13 52509045 52509242 -67775070 - B3A SINE B2 0 198 4 1 985 1211 234 30 122 chr13 52509244 52509614 -67774698 + MTE2a LTR MaLR 1 336 -43 1 985 230 73 24 0 chr13 52509648 52509689 -67774623 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 1 985 293 198 0 12 chr13 52510403 52510485 -67773827 + GA-rich Low_complexity Low_complexity 4 84 0 1 985 718 306 76 5 chr13 52510545 52510755 -67773557 - B4 SINE B4 -56 236 12 1 985 196 307 86 26 chr13 52510771 52510888 -67773424 + L2 LINE L2 2741 2864 -555 1 985 526 304 78 5 chr13 52510927 52511132 -67773180 + L1M3 LINE L1 4679 4898 -1242 1 985 587 275 56 0 chr13 52511194 52511336 -67772976 - RSINE1 SINE B4 -12 153 4 1 985 388 286 46 29 chr13 52511338 52511511 -67772801 + L1M3 LINE L1 4897 5072 -1068 1 985 227 345 33 60 chr13 52511999 52512150 -67772162 - Tigger10 DNA Tigger -1 1842 1696 1 985 285 29 0 0 chr13 52513182 52513216 -67771096 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 985 448 258 105 0 chr13 52513224 52513348 -67770964 - B3 SINE B2 -53 163 27 2 985 384 328 72 21 chr13 52515016 52515209 -67769103 - B3 SINE B2 -9 207 5 2 985 204 226 0 0 chr13 52515318 52515380 -67768932 + (CATA)n Simple_repeat Simple_repeat 1 62 0 2 985 2314 145 34 13 chr13 52515715 52516093 -67768219 + MTC LTR MaLR 33 418 -3 2 985 180 152 0 0 chr13 52516095 52516128 -67768184 + (TAAA)n Simple_repeat Simple_repeat 1 33 0 2 985 522 246 72 238 chr13 52516818 52517260 -67767052 + ORR1D1 LTR MaLR 3 371 -3 2 985 221 281 0 59 chr13 52518376 52518478 -67765834 + CT-rich Low_complexity Low_complexity 4 99 0 2 985 3186 60 2 22 chr13 52518532 52518940 -67765372 - MTB LTR MaLR 0 400 1 2 985 182 238 44 111 chr13 52518974 52519064 -67765248 - L3 LINE CR1 -651 3838 3755 2 985 369 0 0 0 chr13 52520361 52520402 -67763910 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 985 368 262 144 15 chr13 52520534 52520666 -67763646 - HAL1-3A_ME LINE L1 -734 2124 1976 3 985 334 249 187 57 chr13 52520732 52520941 -67763371 - B4 SINE B4 -50 242 7 3 985 426 289 155 36 chr13 52521489 52521683 -67762629 + ID_B1 SINE B4 2 218 -6 3 985 288 0 0 0 chr13 52521788 52521820 -67762492 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 985 1569 151 11 91 chr13 52521961 52522311 -67762001 + RLTRETN_Mm LTR ERVK 1 322 0 3 985 3185 83 0 2 chr13 52523252 52523660 -67760652 - MTB_Mm LTR MaLR 0 407 1 3 985 1574 216 70 105 chr13 52524071 52524614 -67759698 - RLTR11A LTR ERVK -4 524 1 3 985 414 0 0 0 chr13 52524812 52524858 -67759454 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 985 309 398 43 5 chr13 52524953 52525160 -67759152 - B4A SINE B4 -66 226 12 3 985 459 241 29 29 chr13 52525651 52525788 -67758524 - RMER15-int LTR ERVL -3891 1108 972 4 985 1085 237 32 111 chr13 52526530 52526900 -67757412 + ORR1D1 LTR MaLR 6 346 -28 4 985 225 0 0 0 chr13 52527608 52527633 -67756679 + (A)n Simple_repeat Simple_repeat 1 25 0 4 985 218 81 27 0 chr13 52528193 52528230 -67756082 + (TCCCC)n Simple_repeat Simple_repeat 2 39 0 4 985 248 328 46 29 chr13 52529945 52530184 -67754128 + L1M2 LINE L1 2982 3224 -2919 4 985 317 280 111 20 chr13 52531851 52532004 -67752308 - L1MCa LINE L1 -4950 1558 1392 4 985 207 170 0 0 chr13 52532682 52532729 -67751583 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 985 816 55 0 0 chr13 52532736 52532846 -67751466 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 985 937 249 117 64 chr13 52533256 52533616 -67750696 + MTE2a LTR MaLR 1 379 0 4 985 3555 93 2 10 chr13 52533711 52534190 -67750122 + MT2C_Mm LTR ERVL 1 475 0 4 985 464 217 44 138 chr13 52534914 52534947 -67749365 - B2_Mm2 SINE B2 -11 184 151 5 985 369 0 0 0 chr13 52534947 52534988 -67749324 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 985 647 217 44 138 chr13 52534988 52535157 -67749155 - B3A SINE B2 -45 150 1 5 985 216 343 61 48 chr13 52535413 52535561 -67748751 - MIR SINE MIR -119 149 1 5 985 739 293 133 24 chr13 52535604 52535859 -67748453 + B4A SINE B4 9 291 -1 5 985 195 100 0 0 chr13 52536033 52536063 -67748249 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 985 671 273 58 0 chr13 52536063 52536235 -67748077 - B3A SINE B2 -15 183 2 5 985 387 284 37 12 chr13 52536248 52536382 -67747930 - B1F SINE Alu -11 138 3 5 985 276 360 64 45 chr13 52536382 52536405 -67747907 - ID_B1 SINE B4 -11 213 54 5 985 1423 233 68 18 chr13 52538182 52538518 -67745794 - MTEa LTR MaLR 0 379 27 5 985 235 290 19 138 chr13 52538587 52538747 -67745565 + MLT1H1 LTR MaLR 268 408 0 5 985 275 322 8 76 chr13 52538781 52538800 -67745512 + MLT1H1 LTR MaLR 408 421 -134 5 985 183 80 0 0 chr13 52538800 52538825 -67745487 + (CACAT)n Simple_repeat Simple_repeat 1 25 0 6 985 275 322 8 76 chr13 52538825 52538936 -67745376 + MLT1H1 LTR MaLR 422 529 -26 5 985 24 0 0 0 chr13 52538969 52538993 -67745319 + AT_rich Low_complexity Low_complexity 1 24 0 6 985 735 289 43 8 chr13 52539000 52539234 -67745078 + Lx8 LINE L1 6905 7146 -327 6 985 3008 21 0 0 chr13 52539805 52540137 -67744175 + IAPEY3_LTR LTR ERVK 1 332 0 6 985 604 182 10 0 chr13 52540589 52540688 -67743624 - B3 SINE B2 -116 100 1 6 985 463 101 25 0 chr13 52541269 52541348 -67742964 + (TC)n Simple_repeat Simple_repeat 1 81 0 6 985 486 313 90 10 chr13 52541348 52541548 -67742764 - ID_B1 SINE B4 -1 223 8 6 985 337 312 27 80 chr13 52541765 52541915 -67742397 + MLT1A0 LTR MaLR 51 192 -173 6 985 614 287 9 48 chr13 52542216 52542443 -67741869 - ID_B1 SINE B4 -4 220 3 6 985 360 291 0 0 chr13 52542467 52542625 -67741687 + (CA)n Simple_repeat Simple_repeat 1 158 0 6 985 216 231 0 0 chr13 52542664 52542716 -67741596 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 985 27 62 0 0 chr13 52542716 52542764 -67741548 + AT_rich Low_complexity Low_complexity 1 48 0 7 985 288 274 41 31 chr13 52543415 52543513 -67740799 + MER31B LTR ERV1 225 323 -143 7 985 882 254 87 16 chr13 52543596 52543928 -67740384 - ORR1E LTR MaLR 0 379 1 7 985 409 260 0 39 chr13 52544571 52544675 -67739637 - RSINE1 SINE B4 -64 101 2 7 985 195 100 0 0 chr13 52545072 52545102 -67739210 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 7 985 866 264 9 9 chr13 52545201 52545415 -67738897 - B3 SINE B2 -1 215 2 7 985 630 187 11 23 chr13 52545655 52545830 -67738482 + (CATA)n Simple_repeat Simple_repeat 4 176 0 7 985 539 264 0 6 chr13 52545801 52545980 -67738332 + (CA)n Simple_repeat Simple_repeat 2 179 0 7 985 204 40 0 0 chr13 52546627 52546652 -67737660 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 985 335 256 191 57 chr13 52546683 52546824 -67737488 - RSINE1 SINE B4 -1 164 5 7 985 246 95 0 0 chr13 52546872 52546914 -67737398 + (T)n Simple_repeat Simple_repeat 1 42 0 8 985 1031 282 151 8 chr13 52547171 52547536 -67736776 + MTD LTR MaLR 1 417 -2 8 985 661 250 72 15 chr13 52547865 52548060 -67736252 + MTEb LTR MaLR 174 379 0 8 985 497 58 0 14 chr13 52548231 52548301 -67736011 + (TG)n Simple_repeat Simple_repeat 1 69 0 8 985 665 214 41 48 chr13 52548304 52548425 -67735887 - B3A SINE B2 -45 153 31 8 985 3352 48 5 0 chr13 52548425 52548822 -67735490 + MTB LTR MaLR 2 400 0 8 985 665 214 41 48 chr13 52548822 52548847 -67735465 - B3A SINE B2 -168 30 8 8 985 310 266 48 84 chr13 52549970 52550143 -67734169 + MLT1A LTR MaLR 4 172 -202 8 985 186 223 52 104 chr13 52550362 52550477 -67733835 - MIRm SINE MIR -90 186 78 8 985 3664 133 42 49 chr13 52550782 52551420 -67732892 - RLTR26 LTR ERVK -8 634 1 8 985 1080 260 57 30 chr13 52551429 52551726 -67732586 + MTE2b LTR MaLR 1 305 -74 8 985 707 274 0 19 chr13 52551731 52551891 -67732421 + B3 SINE B2 1 157 -59 9 985 208 70 23 23 chr13 52551919 52551963 -67732349 + (CAAAAA)n Simple_repeat Simple_repeat 6 49 0 9 985 991 108 0 0 chr13 52551965 52552095 -67732217 - B1_Mus2 SINE Alu -16 131 2 9 985 345 62 0 0 chr13 52552103 52552151 -67732161 + (TA)n Simple_repeat Simple_repeat 1 48 0 9 985 380 296 75 7 chr13 52552157 52552378 -67731934 + L1MA4 LINE L1 5831 6066 -234 9 985 190 56 56 0 chr13 52552569 52552605 -67731707 + (CAAA)n Simple_repeat Simple_repeat 3 40 0 9 985 512 295 60 33 chr13 52552678 52552828 -67731484 + B3A SINE B2 63 216 0 9 985 1399 80 37 5 chr13 52553879 52554068 -67730244 + B2_Mm2 SINE B2 1 195 0 9 985 425 208 276 83 chr13 52554614 52554864 -67729448 - RMER5 LTR ERV1 -200 334 37 9 985 2234 263 68 90 chr13 52555231 52556266 -67728046 - Lx8 LINE L1 -2 7471 6460 9 985 1197 208 22 152 chr13 52556831 52557245 -67727067 + ORR1D1 LTR MaLR 1 360 -14 1 985 513 121 0 0 chr13 52557435 52557518 -67726794 + (TC)n Simple_repeat Simple_repeat 2 84 0 1 985 31 44 0 0 chr13 52557663 52557708 -67726604 + AT_rich Low_complexity Low_complexity 1 45 0 1 985 739 226 63 26 chr13 52557809 52558000 -67726312 + B3 SINE B2 14 211 -5 1 985 835 235 58 11 chr13 52558955 52559144 -67725168 - B3A SINE B2 0 198 1 1 123 928 293 130 27 chr13 52559454 52559938 -67724374 - RMER5 LTR ERV1 0 534 1 1 986 684 206 11 11 chr13 52560353 52560530 -67723782 + GA-rich Low_complexity Low_complexity 4 180 0 1 986 810 73 0 0 chr13 52561003 52561126 -67723186 + (GA)n Simple_repeat Simple_repeat 1 123 0 1 986 234 315 19 0 chr13 52561126 52561180 -67723132 + RSINE1 SINE B4 97 151 -14 1 986 211 200 0 0 chr13 52562032 52562067 -67722245 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 986 459 0 0 0 chr13 52562223 52562274 -67722038 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 986 1077 247 33 94 chr13 52562476 52562758 -67721554 - MTE2a LTR MaLR -9 370 100 1 986 1686 91 0 24 chr13 52562758 52563007 -67721305 + L1Md_F2 LINE L1 6336 6578 -4 1 986 1077 247 33 94 chr13 52563007 52563021 -67721291 - MTE2a LTR MaLR -280 99 93 1 986 216 0 0 0 chr13 52563021 52563045 -67721267 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 986 1077 247 33 94 chr13 52563045 52563141 -67721171 - MTE2a LTR MaLR -287 92 1 1 986 240 229 97 91 chr13 52563653 52563807 -67720505 + L1MD LINE L1 5030 5184 -962 1 986 180 0 0 0 chr13 52563893 52563913 -67720399 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 1 986 426 121 0 0 chr13 52564132 52564198 -67720114 + (TG)n Simple_repeat Simple_repeat 1 66 0 1 986 387 0 0 0 chr13 52564283 52564326 -67719986 + (CATAA)n Simple_repeat Simple_repeat 2 44 0 1 986 417 81 0 0 chr13 52564420 52564482 -67719830 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 986 336 278 11 0 chr13 52564489 52564579 -67719733 + Tigger7 DNA MER2_type 28 118 -2373 1 986 337 213 21 31 chr13 52566184 52566281 -67718031 + B4 SINE B4 6 101 -191 1 986 3210 182 179 9 chr13 52566281 52566958 -67717354 + Lx5 LINE L1 6259 7050 0 1 986 441 299 75 32 chr13 52566968 52567174 -67717138 + B4 SINE B4 81 290 -2 1 986 2208 119 3 21 chr13 52568300 52568634 -67715678 - ORR1A4 LTR MaLR -1 328 1 1 986 914 252 43 20 chr13 52568702 52569002 -67715310 - RMER15 LTR ERVL -31 544 238 1 986 294 29 0 0 chr13 52569193 52569228 -67715084 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 986 423 0 0 0 chr13 52569228 52569274 -67715038 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 986 312 268 170 64 chr13 52569325 52569560 -67714752 + L1MEf LINE L1 919 1178 -5022 1 986 396 244 0 0 chr13 52569853 52569935 -67714377 + B4 SINE B4 3 84 -208 1 986 2397 160 34 5 chr13 52569959 52570368 -67713944 - MTC LTR MaLR 0 421 1 1 986 994 183 39 87 chr13 52570368 52570679 -67713633 - MTC-int LTR MaLR -15 1243 948 1 986 681 264 10 40 chr13 52570727 52570928 -67713384 - B3 SINE B2 -6 210 16 1 986 400 306 12 24 chr13 52571667 52571831 -67712481 + B3A SINE B2 1 162 -36 1 986 901 272 0 0 chr13 52571884 52572068 -67712244 + B3 SINE B2 1 184 -32 1 986 929 303 65 50 chr13 52572845 52572935 -67711377 + L1MA6 LINE L1 5704 5796 -504 1 986 2894 50 60 38 chr13 52572935 52573333 -67710979 + MTB_Mm LTR MaLR 1 407 0 1 986 929 303 65 50 chr13 52573333 52573756 -67710556 + L1MA6 LINE L1 5797 6232 -68 1 986 3599 107 33 123 chr13 52573756 52574095 -67710217 - MT2B LTR ERVL 0 601 284 1 986 243 0 0 0 chr13 52574095 52574122 -67710190 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 986 3599 107 33 123 chr13 52574122 52574442 -67709870 - MT2B LTR ERVL -318 283 1 1 986 929 303 65 50 chr13 52574442 52574510 -67709802 + L1MA6 LINE L1 6233 6295 -5 1 986 476 249 37 85 chr13 52574804 52575022 -67709290 - MLT1D LTR MaLR -416 211 2 1 986 345 202 0 25 chr13 52575662 52575743 -67708569 + RMER15 LTR ERVL 343 421 -154 1 986 278 322 70 0 chr13 52576259 52576374 -67707938 + MLT1D LTR MaLR 7 129 -376 1 986 749 270 75 73 chr13 52576375 52576774 -67707538 - MTE2a LTR MaLR -1 418 1 1 986 1962 147 9 60 chr13 52576810 52577157 -67707155 + ORR1A4 LTR MaLR 1 329 0 1 986 377 347 40 7 chr13 52577314 52577465 -67706847 - MLT1F2 LTR MaLR -14 546 391 1 986 250 308 93 0 chr13 52577861 52577968 -67706344 + PB1D7 SINE Alu 1 117 -3 1 986 350 129 0 16 chr13 52577990 52578053 -67706259 + (GGA)n Simple_repeat Simple_repeat 1 62 0 1 986 269 286 0 41 chr13 52578154 52578227 -67706085 + B4A SINE B4 223 292 0 1 986 209 200 0 0 chr13 52578257 52578297 -67706015 + A-rich Low_complexity Low_complexity 3 42 0 1 986 767 321 233 27 chr13 52578401 52579104 -67705208 + MTE-int LTR MaLR 285 1131 -449 1 986 270 325 93 62 chr13 52579655 52579881 -67704431 + MLT1J-int LTR MaLR 601 833 -554 1 986 248 93 0 44 chr13 52580078 52580123 -67704189 + (TCTCCC)n Simple_repeat Simple_repeat 1 43 0 1 986 7644 103 20 13 chr13 52580126 52581771 -67702541 - Lx LINE L1 0 6654 4991 1 986 575 255 0 60 chr13 52581904 52581989 -67702323 - B1F2 SINE Alu -7 142 58 1 986 2119 181 86 90 chr13 52581989 52582524 -67701788 - RMER16 LTR ERVK 0 533 1 1 986 575 255 0 60 chr13 52582524 52582588 -67701724 - B1F2 SINE Alu -92 57 2 1 986 236 149 0 82 chr13 52582887 52582940 -67701372 + T-rich Low_complexity Low_complexity 23 70 0 1 986 1078 99 0 0 chr13 52582940 52583082 -67701230 - B1_Mus1 SINE Alu -6 142 1 1 986 236 149 0 82 chr13 52583082 52583101 -67701211 + T-rich Low_complexity Low_complexity 4 22 0 1 986 2056 162 26 26 chr13 52583250 52583631 -67700681 - RLTR14 LTR ERV1 0 382 2 1 986 325 309 138 42 chr13 52584491 52584514 -67699798 - MLT1F2 LTR MaLR -338 222 201 1 986 4027 58 24 2 chr13 52584514 52585015 -67699297 + RLTR1B LTR ERV1 1 512 0 1 986 325 309 138 42 chr13 52585015 52585180 -67699132 - MLT1F2 LTR MaLR -360 200 16 1 986 853 249 26 26 chr13 52585193 52585424 -67698888 - MTEb LTR MaLR -39 340 110 1 986 326 287 53 0 chr13 52585903 52585997 -67698315 - MTEb LTR MaLR -259 120 22 1 986 707 44 62 0 chr13 52586138 52586251 -67698061 + (AGGGGG)n Simple_repeat Simple_repeat 5 124 0 1 986 23 68 0 0 chr13 52586486 52586530 -67697782 + AT_rich Low_complexity Low_complexity 1 44 0 1 986 583 226 28 178 chr13 52586757 52586797 -67697515 + B3 SINE B2 2 36 -180 1 986 1027 84 89 63 chr13 52586797 52586987 -67697325 + B2_Mm2 SINE B2 1 195 0 1 986 657 226 28 178 chr13 52586987 52587199 -67697113 + B3A SINE B2 27 216 0 1 986 657 262 64 0 chr13 52587414 52587586 -67696726 + ID_B1 SINE B4 21 203 -21 1 986 225 229 16 16 chr13 52587604 52587666 -67696646 + GA-rich Low_complexity Low_complexity 4 65 0 1 986 811 151 6 6 chr13 52588461 52588621 -67695691 + GA-rich Low_complexity Low_complexity 3 162 0 1 986 279 288 47 61 chr13 52588629 52588777 -67695535 + RSINE1 SINE B4 6 151 -14 1 986 1402 76 38 0 chr13 52588803 52588987 -67695325 + B2_Mm2 SINE B2 2 192 -3 1 986 945 213 39 5 chr13 52589171 52589374 -67694938 + B3 SINE B2 2 211 -5 1 986 3325 45 2 12 chr13 52589608 52590009 -67694303 - MTB LTR MaLR 0 400 4 1 986 189 0 0 0 chr13 52590009 52590030 -67694282 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 986 213 154 0 0 chr13 52590265 52590304 -67694008 + (TTG)n Simple_repeat Simple_repeat 1 39 0 1 986 825 200 0 0 chr13 52590309 52590454 -67693858 - B3 SINE B2 -11 205 61 1 986 573 15 0 0 chr13 52590472 52590538 -67693774 + (TA)n Simple_repeat Simple_repeat 2 67 0 1 986 585 232 226 0 chr13 52590541 52590731 -67693581 - MT2A LTR ERVL -59 474 242 1 986 688 164 8 45 chr13 52590797 52590931 -67693381 - MT2A LTR ERVL -404 129 1 1 986 654 270 194 11 chr13 52590958 52591328 -67692984 - Lx8 LINE L1 -255 7218 6781 1 986 633 191 29 14 chr13 52591334 52591472 -67692840 + B1_Mm SINE Alu 8 147 0 1 986 180 0 0 0 chr13 52591472 52591492 -67692820 + (A)n Simple_repeat Simple_repeat 1 20 0 1 986 249 292 0 14 chr13 52592091 52592164 -67692148 + B4A SINE B4 199 270 -22 1 986 543 31 0 0 chr13 52592331 52592396 -67691916 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 986 340 261 32 11 chr13 52592813 52592906 -67691406 - MLT1D LTR MaLR -15 490 396 1 986 486 0 0 0 chr13 52592948 52593002 -67691310 + (TC)n Simple_repeat Simple_repeat 1 54 0 1 986 495 0 0 0 chr13 52593083 52593138 -67691174 + (TCC)n Simple_repeat Simple_repeat 3 57 0 1 986 1429 203 116 15 chr13 52593252 52593587 -67690725 - ORR1D1 LTR MaLR -4 370 2 1 986 299 299 24 48 chr13 52593719 52593884 -67690428 - RMER15 LTR ERVL -414 161 1 1 986 277 220 3 0 chr13 52593884 52593962 -67690350 + L1MC LINE L1 3282 3360 -2786 1 986 795 202 165 19 chr13 52594099 52594311 -67690001 - Lx9 LINE L1 -612 7032 6790 1 986 982 244 83 31 chr13 52594415 52594740 -67689572 + ORR1E LTR MaLR 1 342 -17 1 986 604 270 107 0 chr13 52595168 52595364 -67688948 - ID_B1 SINE B4 -6 218 2 1 986 1239 32 7 0 chr13 52595731 52595885 -67688427 + L1Md_A LINE L1 6427 6581 -1 1 986 501 17 0 0 chr13 52596130 52596188 -67688124 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 986 413 220 10 20 chr13 52596197 52596299 -67688013 - PB1D7 SINE Alu -8 112 12 1 986 317 227 235 43 chr13 52596299 52596312 -67688000 - ID_B1 SINE B4 -8 216 80 1 986 492 18 0 0 chr13 52597515 52597572 -67686740 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 986 227 31 0 30 chr13 52597781 52597814 -67686498 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 986 405 0 0 0 chr13 52597999 52598044 -67686268 + (TC)n Simple_repeat Simple_repeat 2 46 0 1 986 414 0 0 0 chr13 52598044 52598089 -67686223 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 986 450 53 0 0 chr13 52599214 52599271 -67685041 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 986 363 44 0 0 chr13 52599338 52599383 -67684929 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 986 541 271 73 151 chr13 52599395 52599712 -67684600 + B4 SINE B4 1 292 0 1 986 22 35 0 0 chr13 52600222 52600251 -67684061 + AT_rich Low_complexity Low_complexity 1 29 0 2 986 237 33 0 0 chr13 52600902 52600932 -67683380 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 986 561 30 0 0 chr13 52602263 52602330 -67681982 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 986 335 105 18 0 chr13 52603918 52603975 -67680337 + (GGGA)n Simple_repeat Simple_repeat 3 60 0 2 986 214 159 45 0 chr13 52603978 52604022 -67680290 + GA-rich Low_complexity Low_complexity 2 47 0 2 986 501 267 94 22 chr13 52604178 52604358 -67679954 + B3A SINE B2 1 193 -5 2 986 2345 102 12 3 chr13 52604805 52605128 -67679184 + ORR1A3 LTR MaLR 1 326 0 2 986 588 266 102 82 chr13 52606234 52606930 -67677382 + L1M4 LINE L1 3138 3847 -2299 2 986 321 323 50 10 chr13 52606969 52607069 -67677243 + RSINE1 SINE B4 60 163 -2 2 986 192 40 0 0 chr13 52608228 52608253 -67676059 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2 986 727 71 0 0 chr13 52608294 52608393 -67675919 - B1_Mus2 SINE Alu 0 147 49 2 986 603 95 39 16 chr13 52608859 52608987 -67675325 + (TAGA)n Simple_repeat Simple_repeat 3 133 0 2 986 552 216 6 149 chr13 52610287 52610441 -67673871 - B1_Mur1 SINE Alu -9 140 10 2 986 240 127 345 0 chr13 52610635 52610690 -67673622 - PB1D10 SINE Alu -17 100 27 2 986 395 19 19 0 chr13 52610750 52610802 -67673510 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 2 986 374 255 20 0 chr13 52610804 52610906 -67673406 - L1M4 LINE L1 -1363 4783 4680 2 986 396 312 8 51 chr13 52611259 52611377 -67672935 + B3A SINE B2 2 114 -84 2 986 327 121 0 0 chr13 52611383 52611441 -67672871 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 986 423 0 0 0 chr13 52611443 52611490 -67672822 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 986 330 287 136 62 chr13 52611555 52611863 -67672449 + L1MB3 LINE L1 5570 5900 -283 2 986 510 302 71 36 chr13 52611894 52612062 -67672250 + B4 SINE B4 64 237 -55 2 986 296 297 11 0 chr13 52612261 52612352 -67671960 + L1MB3 LINE L1 6089 6180 -3 2 986 23 0 0 0 chr13 52612825 52612848 -67671464 + AT_rich Low_complexity Low_complexity 1 23 0 2 986 634 283 6 6 chr13 52612848 52613008 -67671304 - RSINE1 SINE B4 -4 161 2 2 986 324 349 65 9 chr13 52613042 52613149 -67671163 + PB1D10 SINE Alu 5 117 0 2 986 257 182 35 35 chr13 52613380 52613437 -67670875 + polypurine Low_complexity Low_complexity 5 61 0 2 986 312 383 31 15 chr13 52613470 52613600 -67670712 + RSINE1 SINE B4 3 134 -31 2 986 251 318 94 8 chr13 52613674 52613801 -67670511 + Charlie7 DNA MER1_type 1908 2045 -567 2 986 1892 154 16 43 chr13 52613973 52614346 -67669966 + ORR1B2 LTR MaLR 5 367 0 2 986 770 108 23 31 chr13 52615195 52615453 -67668859 + (CA)n Simple_repeat Simple_repeat 1 256 0 2 986 584 346 78 38 chr13 52615471 52615868 -67668444 + L2a LINE L2 2943 3355 -71 2 986 800 280 6 6 chr13 52616150 52616326 -67667986 - B3A SINE B2 -22 176 1 2 986 518 320 49 30 chr13 52616697 52616964 -67667348 + B4 SINE B4 2 273 -19 2 986 294 29 0 0 chr13 52617465 52617500 -67666812 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 986 427 259 59 66 chr13 52617643 52617860 -67666452 - B4A SINE B4 -23 269 40 2 986 668 237 159 5 chr13 52618602 52618797 -67665515 - URR1B DNA MER1_type 0 225 1 2 986 210 118 0 0 chr13 52619246 52619280 -67665032 + (TCTG)n Simple_repeat Simple_repeat 4 37 0 2 986 238 324 15 0 chr13 52619282 52619350 -67664962 - ID4 SINE ID -14 69 1 2 986 558 317 59 18 chr13 52620095 52620265 -67664047 - B4 SINE B4 -114 178 2 2 986 243 146 0 0 chr13 52621134 52621175 -67663137 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 986 578 176 7 0 chr13 52621190 52621338 -67662974 + (TG)n Simple_repeat Simple_repeat 2 150 0 2 986 796 266 120 26 chr13 52622097 52622363 -67661949 + B4A SINE B4 2 292 0 2 986 31 44 0 0 chr13 52622526 52622571 -67661741 + AT_rich Low_complexity Low_complexity 1 45 0 2 986 551 365 6 0 chr13 52622571 52622730 -67661582 - RSINE1 SINE B4 -4 161 2 2 986 381 302 55 64 chr13 52622793 52623012 -67661300 + MER33 DNA MER1_type 108 324 0 2 986 645 297 54 54 chr13 52623270 52623473 -67660839 + B4A SINE B4 2 204 -88 2 986 297 0 0 0 chr13 52623605 52623638 -67660674 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 986 279 81 0 0 chr13 52625555 52625592 -67658720 - tRNA-Phe-TTY tRNA tRNA -33 43 7 2 986 975 261 127 31 chr13 52626426 52626750 -67657562 - MTE2a LTR MaLR -7 372 18 2 986 675 0 0 0 chr13 52626940 52627015 -67657297 + (GA)n Simple_repeat Simple_repeat 2 76 0 2 986 225 0 0 0 chr13 52627321 52627346 -67656966 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 986 341 323 29 50 chr13 52627578 52627718 -67656594 + B4 SINE B4 3 139 -153 2 986 2180 216 96 44 chr13 52627950 52628601 -67655711 - RMER19A LTR ERVK -12 599 2 2 986 402 263 20 44 chr13 52628829 52628962 -67655350 + B4 SINE B4 136 274 -18 2 986 504 0 0 0 chr13 52629002 52629058 -67655254 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 2 986 600 14 0 0 chr13 52630493 52630562 -67653750 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 986 441 122 0 0 chr13 52630860 52630934 -67653378 + (TCC)n Simple_repeat Simple_repeat 1 74 0 2 986 638 289 69 0 chr13 52631444 52631617 -67652695 + ID_B1 SINE B4 23 207 -17 2 986 246 62 0 0 chr13 52631643 52631675 -67652637 + (GGGA)n Simple_repeat Simple_repeat 3 34 0 2 986 211 304 97 9 chr13 52631694 52631807 -67652505 + MER5A DNA MER1_type 67 189 0 2 986 1546 210 117 3 chr13 52632924 52633258 -67651054 + MTEb LTR MaLR 1 372 -7 2 986 387 169 0 0 chr13 52633261 52633332 -67650980 + (CA)n Simple_repeat Simple_repeat 1 71 0 2 986 499 276 143 127 chr13 52633387 52633757 -67650555 - MTEa LTR MaLR 0 379 4 2 986 657 272 5 86 chr13 52634209 52634418 -67649894 + B3A SINE B2 3 194 -4 2 986 625 250 7 7 chr13 52635410 52635551 -67648761 + ID_B1 SINE B4 83 223 -1 2 986 321 290 0 11 chr13 52636135 52636229 -67648083 + (CATA)n Simple_repeat Simple_repeat 2 94 0 2 986 468 0 0 0 chr13 52636234 52636286 -67648026 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 2 986 374 286 116 10 chr13 52636297 52636495 -67647817 - RMER12 LTR ERVK -335 987 769 2 986 249 257 69 69 chr13 52637640 52637799 -67646513 - MIR SINE MIR -34 228 70 2 986 676 286 25 0 chr13 52638512 52638715 -67645597 + ID_B1 SINE B4 2 209 -15 2 986 252 253 0 0 chr13 52638717 52638792 -67645520 + GA-rich Low_complexity Low_complexity 3 77 0 2 986 314 301 0 21 chr13 52639471 52639566 -67644746 + (CATATA)n Simple_repeat Simple_repeat 6 98 0 2 986 378 0 0 0 chr13 52639930 52639972 -67644340 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 986 713 271 116 127 chr13 52640144 52640711 -67643601 - RMER15 LTR ERVL -14 561 1 2 986 216 0 0 0 chr13 52640719 52640743 -67643569 + (T)n Simple_repeat Simple_repeat 1 24 0 2 986 1262 41 0 0 chr13 52640743 52640890 -67643422 - B1_Mus1 SINE Alu 0 148 2 2 986 2552 125 12 17 chr13 52640898 52641305 -67643007 - MTB_Mm LTR MaLR 0 407 3 2 986 291 279 38 0 chr13 52642039 52642118 -67642194 + ID2 SINE ID 1 82 -1 2 986 375 23 0 0 chr13 52642815 52642859 -67641453 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 986 456 19 0 0 chr13 52642880 52642933 -67641379 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 986 1549 41 0 25 chr13 52642980 52643161 -67641151 + L1Md_F2 LINE L1 6381 6561 -21 2 986 189 74 0 0 chr13 52643161 52643188 -67641124 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 986 1549 41 0 25 chr13 52643188 52643208 -67641104 + L1Md_F2 LINE L1 6562 6577 -5 2 986 1788 114 42 72 chr13 52643238 52643569 -67640743 + ORR1A4 LTR MaLR 1 321 -8 2 986 602 236 48 39 chr13 52643711 52643918 -67640394 - Lx7 LINE L1 -1842 5854 5646 2 986 552 192 51 58 chr13 52644470 52644587 -67639725 + B3 SINE B2 75 193 -23 2 986 1623 170 78 88 chr13 52644587 52644974 -67639338 + ORR1C2 LTR MaLR 2 384 0 2 986 552 192 51 58 chr13 52644974 52644994 -67639318 + B3 SINE B2 194 211 -5 2 986 387 0 0 0 chr13 52645062 52645105 -67639207 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 986 1151 244 151 36 chr13 52645949 52646095 -67638217 - MTD LTR MaLR -14 405 265 2 986 423 0 0 0 chr13 52646095 52646142 -67638170 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 986 1151 233 167 37 chr13 52646142 52646357 -67637955 - MTD LTR MaLR -155 264 13 2 986 327 254 0 14 chr13 52647094 52647166 -67637146 - B4 SINE B4 -4 288 218 2 986 551 274 0 59 chr13 52647188 52647324 -67636988 - RSINE1 SINE B4 0 165 38 2 986 1227 108 11 11 chr13 52647456 52647633 -67636679 + B2_Mm2 SINE B2 2 178 -17 2 986 520 240 223 29 chr13 52648004 52648210 -67636102 + B4A SINE B4 47 292 0 2 986 636 276 115 6 chr13 52649488 52649670 -67634642 - ID_B1 SINE B4 -10 214 13 2 986 1364 246 60 40 chr13 52649685 52650033 -67634279 - ORR1D2 LTR MaLR -15 355 1 2 986 342 0 0 0 chr13 52650582 52650620 -67633692 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 986 737 274 126 27 chr13 52650646 52650908 -67633404 - B4 SINE B4 -2 290 3 2 986 2169 148 20 11 chr13 52651825 52652181 -67632131 + ORR1B2 LTR MaLR 1 359 -8 2 986 733 142 7 56 chr13 52652418 52652560 -67631752 + ORR1D1 LTR MaLR 1 135 -239 2 986 227 214 53 18 chr13 52652881 52652938 -67631374 - Kanga2_a DNA Tc2 -532 356 298 2 986 286 269 0 25 chr13 52653721 52653801 -67630511 + GA-rich Low_complexity Low_complexity 3 80 0 2 986 288 0 0 0 chr13 52654756 52654788 -67629524 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 986 401 339 8 0 chr13 52655538 52655668 -67628644 + ID_B1 SINE B4 94 224 0 2 986 377 276 282 5 chr13 52655691 52655876 -67628436 - RMER15 LTR ERVL -4 571 336 3 986 359 238 29 38 chr13 52656060 52656165 -67628147 - RLTR23 LTR ERV1 -16 414 311 3 986 279 0 0 0 chr13 52657300 52657331 -67626981 + (A)n Simple_repeat Simple_repeat 1 31 0 3 986 192 200 0 0 chr13 52657408 52657448 -67626864 + GA-rich Low_complexity Low_complexity 3 42 0 3 986 426 20 0 0 chr13 52658149 52658200 -67626112 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 3 986 330 235 35 12 chr13 52658261 52658347 -67625965 - Lx8 LINE L1 -614 6859 6772 3 986 403 304 82 73 chr13 52658746 52658966 -67625346 + RLTR14 LTR ERV1 161 382 0 3 986 217 25 0 232 chr13 52659734 52659889 -67624423 + (CCCTAG)n Simple_repeat Simple_repeat 5 123 0 3 986 937 225 77 20 chr13 52660021 52660216 -67624096 - ID_B1 SINE B4 0 224 19 3 986 372 252 0 0 chr13 52661031 52661138 -67623174 + (TG)n Simple_repeat Simple_repeat 2 108 0 3 986 688 287 80 25 chr13 52661178 52661453 -67622859 - B4 SINE B4 0 292 3 3 986 423 0 0 0 chr13 52662817 52662864 -67621448 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 986 317 262 86 18 chr13 52663045 52663206 -67621106 + L1M5 LINE L1 5154 5330 -816 3 986 310 287 185 68 chr13 52663301 52663626 -67620686 + L1M5 LINE L1 5376 5738 -426 3 986 314 266 33 44 chr13 52663711 52663892 -67620420 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 986 511 325 148 48 chr13 52663947 52664238 -67620074 - MER21B LTR ERV1 -74 789 470 3 986 969 166 13 7 chr13 52666370 52666681 -67617631 + CT-rich Low_complexity Low_complexity 1 313 0 3 986 261 267 53 0 chr13 52666683 52666758 -67617554 - ID_B1 SINE B4 0 224 146 3 986 246 62 0 0 chr13 52666835 52666867 -67617445 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 3 986 301 235 33 66 chr13 52666867 52666958 -67617354 + B4A SINE B4 82 169 -123 3 986 539 182 14 2 chr13 52666882 52666984 -67617328 + PB1D9 SINE Alu 9 112 -36 3 986 262 318 82 37 chr13 52667728 52667862 -67616450 + MIRb SINE MIR 34 173 -95 3 986 2254 119 23 0 chr13 52668412 52668764 -67615548 - ORR1B2 LTR MaLR -7 360 1 3 986 296 203 29 0 chr13 52668767 52668836 -67615476 + RMER15 LTR ERVL 402 472 -103 3 986 374 324 61 33 chr13 52668827 52669041 -67615271 + MER45B DNA Tip100 631 850 -190 3 986 23 33 0 0 chr13 52669246 52669276 -67615036 + AT_rich Low_complexity Low_complexity 1 30 0 3 986 766 138 22 28 chr13 52669283 52669462 -67614850 + (TATG)n Simple_repeat Simple_repeat 1 178 0 3 986 390 175 0 0 chr13 52669460 52669540 -67614772 + (TG)n Simple_repeat Simple_repeat 1 80 0 3 986 305 206 108 192 chr13 52669540 52669660 -67614652 - RSINE1 SINE B4 0 165 56 3 986 314 245 138 0 chr13 52670306 52670400 -67613912 + B4A SINE B4 184 290 -2 3 986 1039 189 39 10 chr13 52670590 52670793 -67613519 - B3 SINE B2 -7 209 1 3 986 273 309 85 55 chr13 52671262 52671461 -67612851 - RLTR21 LTR ERVK -302 1270 1066 3 986 240 324 40 0 chr13 52672113 52672187 -67612125 + PB1D10 SINE Alu 5 81 -36 3 986 312 324 90 19 chr13 52673439 52673650 -67610662 - ORR1E LTR MaLR -2 357 132 3 986 774 189 0 0 chr13 52673650 52673830 -67610482 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 986 596 214 0 6 chr13 52673843 52674017 -67610295 + (CA)n Simple_repeat Simple_repeat 2 174 0 3 986 385 213 146 21 chr13 52674018 52674114 -67610198 - ORR1E LTR MaLR -230 129 22 3 986 665 270 58 4 chr13 52674274 52674531 -67609781 - L1MC LINE L1 -762 5571 5301 3 986 477 0 0 0 chr13 52674672 52674725 -67609587 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 986 366 272 64 58 chr13 52674842 52674998 -67609314 + RSINE1 SINE B4 3 159 -6 3 986 191 81 54 0 chr13 52675011 52675048 -67609264 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 3 986 475 254 39 62 chr13 52675232 52675429 -67608883 - B3 SINE B2 -1 194 4 3 986 238 257 13 13 chr13 52675474 52675549 -67608763 - L1MA9 LINE L1 -4 6308 6234 3 986 207 0 0 0 chr13 52675558 52675581 -67608731 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 986 323 272 84 42 chr13 52675582 52675701 -67608611 + L1MD LINE L1 3070 3193 -2953 3 986 390 394 36 42 chr13 52675707 52676065 -67608247 + L1MEd LINE L1 508 863 -5256 3 986 450 75 0 0 chr13 52676089 52676156 -67608156 - L1_Mus1 LINE L1 -1 6566 6500 3 986 593 272 77 71 chr13 52676520 52676852 -67607460 + RMER15 LTR ERVL 1 432 -143 3 986 679 259 6 36 chr13 52676852 52677020 -67607292 + B4A SINE B4 130 292 0 3 986 200 0 100 0 chr13 52677116 52677146 -67607166 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 3 986 442 226 29 0 chr13 52677533 52677635 -67606677 - B4 SINE B4 -186 106 2 3 986 189 107 0 0 chr13 52677701 52677729 -67606583 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3 986 240 211 0 17 chr13 52678541 52678599 -67605713 + GA-rich Low_complexity Low_complexity 1 57 0 3 986 22 0 0 0 chr13 52678780 52678802 -67605510 + GC_rich Low_complexity Low_complexity 1 22 0 3 986 30 0 0 0 chr13 52679246 52679276 -67605036 + AT_rich Low_complexity Low_complexity 1 30 0 3 986 285 324 123 45 chr13 52680094 52680314 -67603998 - MER46C DNA MER2_type -43 295 59 3 986 360 261 161 46 chr13 52680521 52680738 -67603574 - LTR65 LTR ERV1 -409 260 19 3 986 447 19 0 0 chr13 52680902 52680954 -67603358 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 986 613 253 35 55 chr13 52681286 52681438 -67602874 + B3 SINE B2 20 177 -39 3 986 354 23 0 0 chr13 52681438 52681481 -67602831 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 986 613 253 35 55 chr13 52681481 52681529 -67602783 + B3 SINE B2 178 216 0 3 986 384 283 217 0 chr13 52681558 52681664 -67602648 + ID_B1 SINE B4 85 213 -11 3 986 693 0 0 0 chr13 52681664 52681741 -67602571 + (GGAAA)n Simple_repeat Simple_repeat 3 79 0 3 986 943 257 64 0 chr13 52681761 52681963 -67602349 + ID_B1 SINE B4 8 222 -2 3 986 312 312 94 144 chr13 52683080 52683496 -67600816 + MLT1A1 LTR MaLR 4 398 -10 3 986 731 104 0 9 chr13 52683714 52683830 -67600482 + (TTC)n Simple_repeat Simple_repeat 3 117 0 3 986 291 114 0 0 chr13 52684467 52684511 -67599801 + (ATG)n Simple_repeat Simple_repeat 2 45 0 3 986 226 0 29 29 chr13 52684666 52684701 -67599611 + (TTTTG)n Simple_repeat Simple_repeat 3 37 0 3 986 558 98 0 0 chr13 52684933 52685015 -67599297 + (TATG)n Simple_repeat Simple_repeat 1 82 0 3 986 405 0 0 0 chr13 52685804 52685849 -67598463 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 986 314 319 0 0 chr13 52685864 52685933 -67598379 - B4 SINE B4 -3 289 221 3 986 867 237 34 0 chr13 52685966 52686143 -67598169 - B3A SINE B2 -7 191 9 3 986 571 291 41 62 chr13 52686155 52686349 -67597963 - B4 SINE B4 -101 191 2 3 986 404 221 94 10 chr13 52686999 52687095 -67597217 - MTD LTR MaLR -14 405 302 3 986 266 167 36 36 chr13 52687094 52687150 -67597162 - MTC LTR MaLR -356 65 10 3 986 351 0 0 0 chr13 52687236 52687275 -67597037 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 986 450 0 0 0 chr13 52687276 52687326 -67596986 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 986 1247 57 6 0 chr13 52687654 52687813 -67596499 - B2_Mm2 SINE B2 -34 161 2 3 986 985 179 329 21 chr13 52687864 52687953 -67596359 + ORR1D1 LTR MaLR 1 89 -285 3 986 333 0 0 0 chr13 52687953 52687990 -67596322 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 986 985 179 329 21 chr13 52687990 52688186 -67596126 + ORR1D1 LTR MaLR 90 373 -1 3 986 387 0 0 0 chr13 52688281 52688324 -67595988 + (TC)n Simple_repeat Simple_repeat 1 43 0 3 986 278 268 316 41 chr13 52688324 52688386 -67595926 - RMER15 LTR ERVL -23 552 472 3 986 2323 86 0 97 chr13 52688386 52688439 -67595873 - ORR1A3 LTR MaLR 0 326 284 3 986 1363 104 5 10 chr13 52688439 52688633 -67595679 - B2_Mm1a SINE B2 0 193 1 3 986 2323 86 0 97 chr13 52688633 52688940 -67595372 - ORR1A3 LTR MaLR -43 283 1 3 986 278 268 316 41 chr13 52688940 52688978 -67595334 - RMER15 LTR ERVL -104 471 423 3 986 408 20 0 0 chr13 52688978 52689027 -67595285 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 986 278 268 316 41 chr13 52689027 52689143 -67595169 - RMER15 LTR ERVL -153 422 275 3 986 620 298 51 51 chr13 52689238 52689514 -67594798 - L1MA7 LINE L1 -388 5903 5628 3 986 342 0 0 0 chr13 52689830 52689868 -67594444 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 986 403 286 63 14 chr13 52689991 52690133 -67594179 - MER74A LTR ERVL -275 283 135 3 123 742 295 86 30 chr13 52690473 52690998 -67593314 + L1MD LINE L1 2389 2946 -3200 3 987 894 264 10 5 chr13 52690998 52691207 -67593105 + B3 SINE B2 5 214 -2 3 987 704 299 97 63 chr13 52691207 52691278 -67593034 + L1MD LINE L1 2947 3004 -3142 3 987 437 233 63 26 chr13 52691295 52691453 -67592859 - MLT1A1 LTR MaLR -18 390 172 3 987 614 215 11 31 chr13 52693218 52693573 -67590739 + (TATG)n Simple_repeat Simple_repeat 1 347 0 3 987 621 0 0 0 chr13 52693576 52693645 -67590667 + (CATATA)n Simple_repeat Simple_repeat 2 70 0 3 987 342 80 0 0 chr13 52693666 52693716 -67590596 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 987 272 111 0 18 chr13 52693716 52693771 -67590541 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 987 250 267 33 16 chr13 52693778 52693839 -67590473 - RSINE1 SINE B4 -17 148 87 3 987 328 225 0 130 chr13 52693860 52693952 -67590360 - B4A SINE B4 -119 173 94 3 987 1024 261 53 21 chr13 52694532 52694814 -67589498 + B4 SINE B4 2 292 0 3 987 980 238 47 84 chr13 52696413 52696711 -67587601 + B4 SINE B4 6 292 0 3 987 291 93 0 0 chr13 52696726 52696769 -67587543 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 987 1246 258 102 42 chr13 52696846 52697227 -67587085 - MTD LTR MaLR -15 404 1 3 987 1096 312 69 31 chr13 52697227 52697678 -67586634 - MER82 DNA MER2_type -183 470 2 3 987 611 283 89 22 chr13 52698349 52698573 -67585739 + B4A SINE B4 18 256 -36 3 987 256 150 25 0 chr13 52698595 52698675 -67585637 + CT-rich Low_complexity Low_complexity 1 82 0 3 987 321 233 0 0 chr13 52698674 52698764 -67585548 + (CA)n Simple_repeat Simple_repeat 1 90 0 3 987 321 312 85 15 chr13 52700031 52700161 -67584151 + RMER15 LTR ERVL 347 485 -90 3 987 29 0 0 0 chr13 52700694 52700723 -67583589 + AT_rich Low_complexity Low_complexity 1 29 0 4 987 479 257 0 35 chr13 52702249 52702362 -67581950 + B4 SINE B4 8 116 -176 4 987 1058 260 174 79 chr13 52702406 52702710 -67581602 - RLTR22_Mur LTR ERVK -188 1620 1362 4 987 423 0 0 0 chr13 52702710 52702757 -67581555 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 987 1328 248 174 98 chr13 52702757 52703914 -67580398 - RLTR22_Mur LTR ERVK -447 1361 42 4 987 554 265 47 7 chr13 52703914 52704062 -67580250 + B4A SINE B4 133 286 -6 4 987 266 216 39 62 chr13 52704719 52704897 -67579415 + (TG)n Simple_repeat Simple_repeat 2 175 0 4 987 216 203 57 63 chr13 52704817 52704975 -67579337 + (ATGTG)n Simple_repeat Simple_repeat 4 160 0 4 987 690 264 25 25 chr13 52705509 52705711 -67578601 + ID_B1 SINE B4 5 206 -18 4 987 449 258 50 62 chr13 52707148 52707309 -67577003 - RSINE1 SINE B4 -5 160 2 4 987 296 275 14 0 chr13 52708238 52708307 -67576005 - B4A SINE B4 -2 290 221 4 987 566 215 24 92 chr13 52708337 52708501 -67575811 - RSINE1 SINE B4 -2 163 11 4 987 359 245 18 101 chr13 52708499 52708608 -67575704 - B4A SINE B4 -59 233 134 4 987 21 0 0 0 chr13 52709049 52709070 -67575242 + AT_rich Low_complexity Low_complexity 1 21 0 4 987 1159 217 0 0 chr13 52709070 52709282 -67575030 + B3 SINE B2 1 212 -4 4 987 2285 162 91 0 chr13 52709325 52709733 -67574579 - RMER1B Other Other -1 1065 621 4 987 207 0 0 0 chr13 52710843 52710866 -67573446 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 987 303 217 72 0 chr13 52711155 52711224 -67573088 + Tigger7 DNA MER2_type 275 348 -2143 4 987 324 0 0 0 chr13 52712073 52712109 -67572203 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 987 815 295 5 10 chr13 52712145 52712340 -67571972 - B4 SINE B4 -9 283 90 4 987 306 304 106 99 chr13 52712943 52713104 -67571208 - B4 SINE B4 -50 242 81 4 987 1156 57 0 0 chr13 52713189 52713329 -67570983 - B1_Mus1 SINE Alu -8 140 1 4 987 369 262 0 0 chr13 52713340 52713420 -67570892 - B4 SINE B4 -208 84 5 4 987 246 290 0 70 chr13 52713697 52713797 -67570515 + C-rich Low_complexity Low_complexity 5 97 0 4 987 193 238 25 0 chr13 52714175 52714255 -67570057 + CT-rich Low_complexity Low_complexity 5 86 0 4 987 552 30 0 0 chr13 52714255 52714321 -67569991 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 987 539 332 22 44 chr13 52714349 52714576 -67569736 - B4A SINE B4 0 292 71 4 987 252 0 0 0 chr13 52714610 52714638 -67569674 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 987 442 150 12 53 chr13 52716313 52716482 -67567830 + CT-rich Low_complexity Low_complexity 1 162 0 4 987 438 20 0 0 chr13 52716776 52716827 -67567485 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 987 327 129 0 136 chr13 52717205 52717286 -67567026 + PB1D10 SINE Alu 48 117 0 4 987 1187 101 39 11 chr13 52717372 52717396 -67566916 - B2_Mm1t SINE B2 -6 187 159 4 987 414 0 0 0 chr13 52717396 52717442 -67566870 + (TTA)n Simple_repeat Simple_repeat 3 48 0 4 987 1187 101 39 11 chr13 52717442 52717598 -67566714 - B2_Mm1t SINE B2 -35 158 2 4 987 969 185 36 141 chr13 52717598 52717875 -67566437 + MTE2a LTR MaLR 2 249 -130 4 987 207 0 0 0 chr13 52718296 52718319 -67565993 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 987 347 210 170 0 chr13 52718346 52718446 -67565866 + PB1D9 SINE Alu 2 118 -2 4 987 556 266 7 59 chr13 52720698 52720850 -67563462 + RSINE1 SINE B4 8 151 -14 4 987 180 77 0 0 chr13 52720921 52720947 -67563365 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 4 987 259 291 61 3 chr13 52720956 52721055 -67563257 - PB1D10 SINE Alu -11 138 32 4 987 420 150 0 0 chr13 52721073 52721153 -67563159 + (CA)n Simple_repeat Simple_repeat 2 81 0 4 987 263 187 21 32 chr13 52721157 52721251 -67563061 + (TATATG)n Simple_repeat Simple_repeat 3 95 0 4 987 259 328 68 30 chr13 52722397 52722529 -67561783 - MLT1E3 LTR MaLR -393 231 95 4 987 1165 227 37 54 chr13 52722613 52722907 -67561405 + B4A SINE B4 4 292 0 4 987 255 319 28 0 chr13 52723070 52723142 -67561170 + B4 SINE B4 2 75 -217 4 987 291 192 434 0 chr13 52723193 52723292 -67561020 - B3 SINE B2 0 216 75 4 987 1206 79 66 22 chr13 52723289 52723470 -67560842 + B2_Mm2 SINE B2 6 194 -1 4 987 485 259 223 0 chr13 52723841 52724007 -67560305 + B4 SINE B4 90 292 0 4 987 207 146 24 24 chr13 52724013 52724055 -67560257 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 987 356 265 7 0 chr13 52725457 52725604 -67558708 + (TCCA)n Simple_repeat Simple_repeat 4 151 0 4 987 513 0 0 0 chr13 52726771 52726828 -67557484 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 4 987 366 237 26 0 chr13 52727746 52727822 -67556490 + ID4_ SINE ID 3 80 -3 4 987 346 311 47 129 chr13 52728551 52728721 -67555591 - RSINE1 SINE B4 0 165 10 4 987 263 98 39 0 chr13 52729153 52729204 -67555108 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 4 987 359 41 20 0 chr13 52729309 52729358 -67554954 + (TAA)n Simple_repeat Simple_repeat 1 50 0 4 987 1185 204 12 20 chr13 52729358 52729603 -67554709 - B4 SINE B4 -48 244 2 4 987 341 352 77 85 chr13 52729633 52730106 -67554206 - L1MC LINE L1 -1964 4182 3713 4 987 1513 187 142 12 chr13 52730106 52730436 -67553876 - ORR1D1 LTR MaLR 0 374 2 4 987 341 332 60 73 chr13 52730436 52730478 -67553834 - L1MC LINE L1 -2434 3712 3678 4 987 306 0 0 0 chr13 52730945 52730979 -67553333 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 987 277 276 52 13 chr13 52730988 52731065 -67553247 - RSINE1 SINE B4 -83 82 3 4 987 601 282 0 21 chr13 52731380 52731525 -67552787 + ID_B1 SINE B4 83 224 0 4 987 234 236 106 53 chr13 52731614 52731708 -67552604 - MamRep605 Unknown Unknown -345 531 433 4 987 249 173 58 0 chr13 52731812 52731864 -67552448 + RLTR15 LTR ERVK 1 55 -304 4 987 275 235 214 10 chr13 52731847 52731950 -67552362 - RMER15 LTR ERVL -48 527 404 4 987 324 311 0 11 chr13 52732286 52732377 -67551935 - ID_B1 SINE B4 -59 165 76 4 987 1247 41 0 0 chr13 52732601 52732746 -67551566 + B1_Mus1 SINE Alu 2 146 -2 4 987 267 31 0 0 chr13 52732746 52732778 -67551534 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 987 402 21 0 0 chr13 52732782 52732829 -67551483 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 4 987 378 0 0 0 chr13 52732891 52732933 -67551379 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 987 365 243 253 31 chr13 52732955 52733180 -67551132 - B4 SINE B4 -16 276 2 4 987 226 50 50 0 chr13 52733191 52733231 -67551081 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 987 374 139 12 0 chr13 52733757 52733843 -67550469 + CT-rich Low_complexity Low_complexity 1 87 0 4 987 243 0 0 0 chr13 52733843 52733870 -67550442 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 987 299 253 0 85 chr13 52733891 52733973 -67550339 - B4A SINE B4 -2 290 216 4 987 711 247 6 53 chr13 52733970 52734141 -67550171 - B3A SINE B2 -4 194 32 4 987 1196 68 0 20 chr13 52734142 52734293 -67550019 + B1_Mus1 SINE Alu 1 148 0 4 987 264 122 0 0 chr13 52734296 52734337 -67549975 + (GAAAA)n Simple_repeat Simple_repeat 5 45 0 4 987 242 250 0 0 chr13 52734337 52734381 -67549931 - B3A SINE B2 -153 45 2 4 987 514 307 66 54 chr13 52734407 52734648 -67549664 - B4A SINE B4 -47 245 2 4 987 731 297 20 66 chr13 52734931 52735234 -67549078 - B4 SINE B4 0 292 4 4 987 284 203 27 0 chr13 52735292 52735366 -67548946 + (TATATG)n Simple_repeat Simple_repeat 4 79 0 4 987 688 252 0 0 chr13 52735448 52735583 -67548729 + B1_Mur1 SINE Alu 1 135 -14 4 987 207 0 0 0 chr13 52735585 52735608 -67548704 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 987 180 125 0 0 chr13 52735640 52735672 -67548640 + (GTTTG)n Simple_repeat Simple_repeat 4 35 0 4 987 494 291 28 39 chr13 52735672 52735851 -67548461 - B4A SINE B4 -113 179 3 4 987 637 297 6 25 chr13 52736542 52736701 -67547611 - RSINE1 SINE B4 -8 157 2 4 987 280 202 309 0 chr13 52736751 52736835 -67547477 - PB1D10 SINE Alu 0 117 8 4 987 271 291 48 48 chr13 52736790 52736839 -67547473 - ID_B1 SINE B4 -91 133 86 4 987 803 147 304 6 chr13 52736839 52737010 -67547302 - URR1A DNA MER1_type -4 222 1 4 987 271 291 48 48 chr13 52737010 52737043 -67547269 - ID SINE ID -139 85 51 4 987 1364 223 17 38 chr13 52737705 52737738 -67546574 - B4 SINE B4 0 292 270 4 987 387 0 0 0 chr13 52737738 52737781 -67546531 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 987 1364 223 17 38 chr13 52737781 52738036 -67546276 - B4 SINE B4 -23 269 10 4 987 387 0 0 0 chr13 52738037 52738080 -67546232 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 987 547 312 63 60 chr13 52738618 52738887 -67545425 - MTE2a LTR MaLR -104 275 6 4 987 1951 97 0 11 chr13 52740043 52740315 -67543997 - RMER19A LTR ERVK 0 737 469 4 987 1154 246 3 86 chr13 52740552 52740855 -67543457 + B4 SINE B4 1 278 -14 4 987 1210 210 47 72 chr13 52741835 52742153 -67542159 - ORR1E LTR MaLR -15 344 35 4 987 315 258 116 113 chr13 52742124 52742399 -67541913 - MLT1A0 LTR MaLR -88 277 2 4 987 1090 197 36 18 chr13 52742802 52743024 -67541288 - URR1A DNA MER1_type 0 226 1 4 987 375 199 100 0 chr13 52744774 52744880 -67539432 - MTD LTR MaLR -304 115 5 4 987 748 304 46 30 chr13 52744902 52745139 -67539173 + B4A SINE B4 49 289 -3 4 987 273 305 0 0 chr13 52745161 52745312 -67539000 + (CA)n Simple_repeat Simple_repeat 2 152 0 4 987 287 296 0 0 chr13 52745323 52745394 -67538918 + (CA)n Simple_repeat Simple_repeat 2 72 0 4 987 399 286 0 0 chr13 52745405 52745566 -67538746 + (CA)n Simple_repeat Simple_repeat 2 162 0 4 987 354 259 66 35 chr13 52745698 52745908 -67538404 - MTE2b LTR MaLR 0 379 145 4 987 718 238 14 81 chr13 52746423 52746481 -67537831 - B3A SINE B2 0 198 154 4 987 188 111 0 27 chr13 52746481 52746518 -67537794 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 987 718 238 14 81 chr13 52746518 52746669 -67537643 - B3A SINE B2 -45 153 3 4 987 457 89 0 37 chr13 52746710 52746792 -67537520 + (TCCC)n Simple_repeat Simple_repeat 2 80 0 4 987 25 0 0 0 chr13 52747201 52747226 -67537086 + AT_rich Low_complexity Low_complexity 1 25 0 4 987 423 0 0 0 chr13 52747226 52747273 -67537039 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 4 987 1487 207 225 38 chr13 52748230 52748706 -67535606 + RMER15 LTR ERVL 11 575 0 4 987 648 0 0 0 chr13 52748921 52748993 -67535319 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 987 419 250 11 40 chr13 52749036 52749211 -67535101 + (TATATG)n Simple_repeat Simple_repeat 6 175 0 5 987 430 296 145 36 chr13 52750265 52750458 -67533854 - Arthur1 DNA Tip100 -3679 268 55 5 987 303 359 0 8 chr13 52750568 52750700 -67533612 + GA-rich Low_complexity Low_complexity 3 133 0 5 987 459 153 7 45 chr13 52750721 52751035 -67533277 + GA-rich Low_complexity Low_complexity 1 301 0 5 987 225 212 0 96 chr13 52751035 52751108 -67533204 + polypurine Low_complexity Low_complexity 2 67 0 5 987 906 164 0 0 chr13 52752425 52752682 -67531630 + (CA)n Simple_repeat Simple_repeat 1 257 0 5 987 570 175 0 0 chr13 52752696 52752839 -67531473 + (CA)n Simple_repeat Simple_repeat 2 144 0 5 987 307 324 62 28 chr13 52755347 52755525 -67528787 - ORR1E LTR MaLR -169 190 7 5 987 707 295 85 44 chr13 52755525 52755915 -67528397 + ERVL-int LTR ERVL 4768 5173 -584 5 987 3950 188 39 49 chr13 52755919 52756741 -67527571 + RLTR40 LTR ERVK 1 814 -3 5 987 476 300 150 47 chr13 52757050 52757371 -67526941 + MTE2a LTR MaLR 19 380 -39 5 987 1812 182 69 13 chr13 52757355 52757733 -67526579 - MTD LTR MaLR -16 403 5 5 987 333 326 22 0 chr13 52757798 52757936 -67526376 + ERVL-int LTR ERVL 5543 5683 -31 5 987 553 305 73 23 chr13 52757942 52758160 -67526152 + MLT2B2 LTR ERVL 19 247 -273 5 987 2561 57 3 0 chr13 52758162 52758480 -67525832 + ORR1A2 LTR MaLR 1 319 -8 5 987 592 329 29 77 chr13 52758476 52758749 -67525563 + MLT2B2 LTR ERVL 238 497 -18 5 987 283 324 158 68 chr13 52759556 52759821 -67524491 + ORR1E LTR MaLR 20 308 -51 5 987 376 330 0 22 chr13 52760104 52760331 -67523981 + (TATG)n Simple_repeat Simple_repeat 1 222 0 5 987 377 325 6 12 chr13 52760360 52760582 -67523730 + (TATATG)n Simple_repeat Simple_repeat 1 220 0 5 987 953 152 172 5 chr13 52761242 52761434 -67522878 + URR1A DNA MER1_type 3 226 0 5 987 398 303 70 7 chr13 52761445 52761588 -67522724 - MER45B DNA Tip100 -237 803 652 5 987 219 293 0 0 chr13 52761589 52761647 -67522665 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 987 263 338 33 75 chr13 52761654 52761868 -67522444 + RLTR21 LTR ERVK 1056 1260 -312 5 987 498 326 69 73 chr13 52761831 52762119 -67522193 - B4A SINE B4 0 292 6 5 987 433 333 88 38 chr13 52762335 52762575 -67521737 - MER45B DNA Tip100 -428 612 361 5 987 356 223 63 72 chr13 52763660 52763771 -67520541 + MT2B LTR ERVL 155 264 -337 5 987 904 35 0 42 chr13 52763695 52763815 -67520497 + B1_Mus1 SINE Alu 34 148 0 5 987 497 293 17 22 chr13 52763893 52764071 -67520241 + (CATA)n Simple_repeat Simple_repeat 2 178 0 5 987 250 286 29 22 chr13 52764624 52764760 -67519552 + (CATA)n Simple_repeat Simple_repeat 2 138 0 5 987 391 47 30 30 chr13 52764781 52764847 -67519465 + (CATA)n Simple_repeat Simple_repeat 4 69 0 5 987 328 320 11 28 chr13 52764875 52765052 -67519260 + (CATA)n Simple_repeat Simple_repeat 2 175 0 5 987 365 247 17 17 chr13 52765076 52765253 -67519059 + (CATA)n Simple_repeat Simple_repeat 4 180 0 5 987 1268 158 18 13 chr13 52765605 52765829 -67518483 + URR1B DNA MER1_type 1 225 0 5 987 23 0 0 0 chr13 52766112 52766135 -67518177 + AT_rich Low_complexity Low_complexity 1 23 0 5 987 717 118 0 0 chr13 52766170 52766280 -67518032 + (GGGA)n Simple_repeat Simple_repeat 4 113 0 5 987 1566 47 5 10 chr13 52766869 52767061 -67517251 + B2_Mm1a SINE B2 1 191 -2 5 987 2191 111 3 111 chr13 52767078 52767382 -67516930 + ORR1A1 LTR MaLR 1 284 -62 5 987 1164 62 6 6 chr13 52767382 52767545 -67516767 + L1Md_F2 LINE L1 6420 6582 0 5 987 2191 111 3 111 chr13 52767545 52767626 -67516686 + ORR1A1 LTR MaLR 285 344 -2 5 987 760 61 10 0 chr13 52767642 52767741 -67516571 - MERVL-int LTR ERVL -660 4825 4726 5 987 496 132 0 0 chr13 52767742 52767825 -67516487 - ORR1A2 LTR MaLR -244 83 1 5 987 1171 278 74 0 chr13 52768177 52768486 -67515826 + MTE2b LTR MaLR 6 337 -42 5 987 257 273 85 95 chr13 52769618 52769777 -67514535 + MTC-int LTR MaLR 131 306 -1064 5 987 640 290 0 7 chr13 52769945 52770084 -67514228 + RSINE1 SINE B4 12 149 -16 5 987 324 211 0 0 chr13 52770088 52770159 -67514153 + (TATATG)n Simple_repeat Simple_repeat 4 74 0 5 987 437 340 47 37 chr13 52770241 52770455 -67513857 - MER97c DNA MER1_type? -860 230 15 5 987 417 225 67 27 chr13 52770718 52770840 -67513472 + B3A SINE B2 57 174 -19 5 987 22 56 0 0 chr13 52771349 52771385 -67512927 + AT_rich Low_complexity Low_complexity 1 36 0 5 987 601 220 110 9 chr13 52771552 52771781 -67512531 + MTE2b LTR MaLR 122 379 0 5 987 294 242 16 16 chr13 52771811 52771874 -67512438 - ID4_ SINE ID -9 74 12 5 987 312 324 231 16 chr13 52771924 52772166 -67512146 - MLT1F LTR MaLR -75 473 180 5 987 327 25 0 0 chr13 52772309 52772349 -67511963 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 987 669 274 5 62 chr13 52773017 52773227 -67511085 - B3A SINE B2 0 198 1 5 987 778 235 22 72 chr13 52773582 52773776 -67510536 - B3A SINE B2 -24 192 7 5 987 313 162 57 29 chr13 52773887 52773957 -67510355 + MIR SINE MIR 36 107 -155 5 987 1080 312 107 34 chr13 52774260 52774757 -67509555 + MT2A LTR ERVL 1 533 0 5 987 677 148 19 0 chr13 52776092 52776200 -67508112 - B1_Mur1 SINE Alu -6 143 34 5 987 821 291 45 5 chr13 52776204 52776425 -67507887 - B4A SINE B4 -62 230 1 5 987 224 271 0 20 chr13 52776473 52776522 -67507790 + ID2 SINE ID 22 69 -14 5 987 744 263 60 72 chr13 52776479 52776729 -67507583 + B4 SINE B4 28 274 -18 5 987 217 75 0 48 chr13 52776735 52776777 -67507535 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 987 205 182 36 0 chr13 52777669 52777724 -67506588 + CT-rich Low_complexity Low_complexity 3 59 0 5 987 239 79 0 26 chr13 52778090 52778129 -67506183 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 987 441 345 60 7 chr13 52778133 52778282 -67506030 - RSINE1 SINE B4 -3 162 6 5 987 257 281 0 17 chr13 52778590 52778648 -67505664 + PB1D10 SINE Alu 24 80 -37 5 987 898 256 0 6 chr13 52778796 52778977 -67505335 - MTEb LTR MaLR -84 295 116 5 987 567 112 0 0 chr13 52779133 52779240 -67505072 + (TC)n Simple_repeat Simple_repeat 1 107 0 5 987 243 0 0 0 chr13 52779240 52779267 -67505045 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 987 250 265 0 42 chr13 52779267 52779338 -67504974 - B4A SINE B4 -23 269 202 5 987 319 282 90 0 chr13 52779334 52779412 -67504900 - B4A SINE B4 -205 87 3 5 987 1370 276 38 30 chr13 52779940 52780309 -67504003 + MTE2b LTR MaLR 4 375 -4 5 987 383 337 31 18 chr13 52780795 52780908 -67503404 + PB1D7 SINE Alu 1 112 -37 5 987 216 239 65 0 chr13 52780908 52780954 -67503358 + B4 SINE B4 1 49 -243 5 987 822 302 12 24 chr13 52780983 52781231 -67503081 + B4A SINE B4 46 290 -2 5 987 354 182 38 76 chr13 52781299 52781483 -67502829 + RMER17C LTR ERVK 97 273 -137 5 987 246 128 0 0 chr13 52781483 52781522 -67502790 + (A)n Simple_repeat Simple_repeat 1 39 0 5 987 696 160 86 64 chr13 52781581 52781694 -67502618 + B1_Mur2 SINE Alu 1 123 -26 5 987 1305 168 22 9 chr13 52781694 52781916 -67502396 + URR1B DNA MER1_type 1 225 0 5 987 696 160 86 64 chr13 52781916 52781942 -67502370 + B1_Mur2 SINE Alu 124 143 -6 5 987 554 150 78 1 chr13 52782982 52783082 -67501230 + B1_Mur2 SINE Alu 3 108 -12 5 987 216 277 15 0 chr13 52783669 52783734 -67500578 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 987 247 329 0 24 chr13 52785170 52785254 -67499058 + RSINE1 SINE B4 77 158 -7 5 987 363 44 0 0 chr13 52785261 52785306 -67499006 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 987 374 278 70 63 chr13 52786770 52786912 -67497400 + B4 SINE B4 110 252 -40 5 987 327 104 0 0 chr13 52786951 52786999 -67497313 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 987 226 333 62 69 chr13 52787075 52787220 -67497092 - MIRb SINE MIR -45 223 80 5 987 488 122 0 12 chr13 52787222 52787305 -67497007 + (GA)n Simple_repeat Simple_repeat 2 83 0 5 987 288 305 21 0 chr13 52787695 52787790 -67496522 + B4A SINE B4 2 98 -194 5 987 392 273 18 35 chr13 52787803 52787917 -67496395 + B4A SINE B4 158 269 -23 5 987 432 240 31 20 chr13 52788071 52788169 -67496143 - RSINE1 SINE B4 -29 136 38 5 987 295 282 145 21 chr13 52788185 52788475 -67495837 - L1ME2z LINE L1 -7 6437 6112 5 987 1201 88 88 0 chr13 52788643 52788814 -67495498 - B2_Mm2 SINE B2 -9 186 1 5 987 353 250 12 23 chr13 52789461 52789547 -67494765 + RMER15 LTR ERVL 338 422 -153 5 987 289 288 30 0 chr13 52789545 52789611 -67494701 - B4A SINE B4 -192 100 33 5 987 188 226 42 139 chr13 52790300 52790372 -67493940 + L4 LINE RTE 90 154 -1875 5 987 965 291 85 11 chr13 52791256 52791527 -67492785 + B4A SINE B4 2 292 0 5 987 518 225 7 0 chr13 52791528 52791670 -67492642 + (CA)n Simple_repeat Simple_repeat 2 144 0 5 987 568 250 95 0 chr13 52792019 52792167 -67492145 + RSINE1 SINE B4 4 165 0 5 987 317 304 0 11 chr13 52792167 52792260 -67492052 + (CA)n Simple_repeat Simple_repeat 1 92 0 5 987 734 324 65 71 chr13 52792610 52792949 -67491363 - MER68 LTR ERVL -7 556 220 5 987 360 246 42 158 chr13 52793204 52793445 -67490867 + RMER15 LTR ERVL 348 560 -15 5 987 371 312 77 0 chr13 52793598 52793768 -67490544 - ERVL-E-int LTR ERVL -5044 623 441 5 987 479 307 158 36 chr13 52793826 52794129 -67490183 + MER20B DNA MER1_type 151 490 -293 5 987 614 37 12 0 chr13 52794160 52794241 -67490071 + (TG)n Simple_repeat Simple_repeat 2 83 0 5 987 730 228 7 26 chr13 52794351 52794504 -67489808 - RSINE1 SINE B4 -13 152 3 5 987 362 288 0 0 chr13 52794674 52794754 -67489558 + B4A SINE B4 3 82 -210 5 987 267 122 0 0 chr13 52794777 52794826 -67489486 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 5 987 242 252 17 0 chr13 52794951 52795070 -67489242 + (CAATA)n Simple_repeat Simple_repeat 2 122 0 5 987 534 336 147 31 chr13 52795699 52796122 -67488190 - MLT1G3 LTR MaLR -7 588 117 5 987 411 38 0 0 chr13 52796429 52796482 -67487830 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 987 731 230 0 7 chr13 52796486 52796635 -67487677 - B3A SINE B2 -48 150 3 5 987 22 35 0 0 chr13 52798027 52798056 -67486256 + AT_rich Low_complexity Low_complexity 1 29 0 5 987 1088 77 13 0 chr13 52798217 52798372 -67485940 + (GAAA)n Simple_repeat Simple_repeat 1 157 0 5 987 287 239 9 156 chr13 52798793 52798902 -67485410 - RSINE1 SINE B4 -2 163 71 6 987 662 219 24 0 chr13 52799611 52799734 -67484578 + RSINE1 SINE B4 3 128 -37 6 987 342 45 0 0 chr13 52799753 52799797 -67484515 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 987 798 120 39 23 chr13 52799878 52800006 -67484306 - B1_Mur4 SINE Alu -2 148 19 6 987 312 240 70 146 chr13 52799914 52800085 -67484227 - MT2B2 LTR ERVL -320 264 107 6 987 817 153 44 0 chr13 52800608 52800745 -67483567 + B1_Mur4 SINE Alu 7 149 -1 6 987 579 299 138 15 chr13 52800807 52801075 -67483237 + RMER15 LTR ERVL 275 575 0 6 987 711 54 0 0 chr13 52801270 52801362 -67482950 + (TC)n Simple_repeat Simple_repeat 1 92 0 6 987 285 29 0 0 chr13 52801362 52801395 -67482917 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 987 361 275 88 37 chr13 52802683 52802819 -67481493 + MLT1F1 LTR MaLR 422 564 -5 6 987 420 172 0 0 chr13 52802995 52803082 -67481230 + (CAGA)n Simple_repeat Simple_repeat 4 90 0 6 987 607 238 106 51 chr13 52803785 52804002 -67480310 + RMER15 LTR ERVL 333 561 -14 6 987 721 272 68 1 chr13 52804505 52804683 -67479629 + ID_B1 SINE B4 1 193 -31 6 987 458 111 49 0 chr13 52804696 52804777 -67479535 - L1_Mus2 LINE L1 0 6566 6482 6 987 476 167 0 46 chr13 52809075 52809226 -67475086 + (CA)n Simple_repeat Simple_repeat 2 145 0 6 987 211 216 0 43 chr13 52809250 52809366 -67474946 + (CA)n Simple_repeat Simple_repeat 2 112 0 6 987 354 23 0 0 chr13 52810068 52810111 -67474201 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 987 536 0 16 0 chr13 52810111 52810174 -67474138 + (GA)n Simple_repeat Simple_repeat 1 65 0 6 987 367 259 278 33 chr13 52810237 52810417 -67473895 - ID_B1 SINE B4 0 224 1 6 987 468 235 8 17 chr13 52810508 52810625 -67473687 + PB1D10 SINE Alu 2 117 0 6 987 254 278 0 0 chr13 52810636 52810690 -67473622 + ID4_ SINE ID 16 69 -14 6 987 540 111 0 0 chr13 52811022 52811103 -67473209 + (TG)n Simple_repeat Simple_repeat 1 81 0 6 987 522 290 38 0 chr13 52811169 52811300 -67473012 - B4A SINE B4 -1 291 156 6 987 21 0 0 0 chr13 52811513 52811534 -67472778 + AT_rich Low_complexity Low_complexity 1 21 0 6 987 524 313 80 31 chr13 52811662 52811886 -67472426 + MER44A DNA MER2_type 103 337 -2 6 987 256 315 87 72 chr13 52812175 52812251 -67472061 + MER96B DNA hAT 220 294 -123 6 987 1333 86 29 0 chr13 52812251 52812426 -67471886 + B2_Mm2 SINE B2 2 181 -14 6 987 3531 5 0 0 chr13 52812426 52812811 -67471501 - L1Md_A LINE L1 -3 6579 6195 6 987 256 315 87 72 chr13 52812811 52812928 -67471384 + MER96B DNA hAT 295 416 -1 6 987 355 283 161 62 chr13 52813569 52813874 -67470438 + RMER5 LTR ERV1 33 367 -167 6 987 559 234 34 0 chr13 52814699 52814835 -67469477 - B1F SINE Alu -9 140 1 6 987 2379 171 38 73 chr13 52815166 52815713 -67468599 - RLTR11A LTR ERVK 0 528 1 6 987 578 295 104 13 chr13 52815865 52816095 -67468217 + B4A SINE B4 13 263 -29 6 987 3649 113 33 11 chr13 52816095 52816741 -67467571 - Lx5 LINE L1 -1086 5964 5301 6 987 7494 37 6 11 chr13 52818605 52819555 -67464757 - L1Md_F2 LINE L1 -12 6570 5625 6 987 375 41 0 0 chr13 52819752 52819801 -67464511 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 6 987 324 0 0 0 chr13 52819822 52819858 -67464454 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 987 218 340 10 20 chr13 52820318 52820420 -67463892 + (TATG)n Simple_repeat Simple_repeat 4 104 0 6 987 472 255 74 31 chr13 52820571 52820597 -67463715 + L1M4c LINE L1 2268 2293 -4091 6 987 1199 55 7 0 chr13 52820597 52820743 -67463569 + B1_Mus2 SINE Alu 1 147 0 6 987 472 255 74 31 chr13 52820743 52820878 -67463434 + L1M4c LINE L1 2294 2435 -3949 6 987 387 316 7 68 chr13 52820963 52821109 -67463203 + B4A SINE B4 103 239 -53 6 987 237 320 31 0 chr13 52821127 52821224 -67463088 + (CATA)n Simple_repeat Simple_repeat 3 102 0 6 987 234 306 96 30 chr13 52821226 52821425 -67462887 + L1M4c LINE L1 2412 2623 -3753 6 987 727 315 92 37 chr13 52821486 52821809 -67462503 + L1M4c LINE L1 2711 3053 -3323 6 987 306 0 0 0 chr13 52821809 52821843 -67462469 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 123 727 315 92 37 chr13 52821843 52822402 -67461910 + L1M4c LINE L1 3054 3640 -2736 6 988 368 289 167 57 chr13 52822744 52822990 -67461322 + L1M4c LINE L1 3701 3973 -2409 6 988 349 261 128 26 chr13 52823005 52823371 -67460941 + L1M4c LINE L1 3876 4281 -2095 6 988 2849 269 40 42 chr13 52823597 52824513 -67459799 - Lx9 LINE L1 -313 7331 6417 6 988 610 147 20 0 chr13 52826582 52826684 -67457628 - B1_Mur2 SINE Alu -14 135 32 6 988 995 221 14 14 chr13 52826888 52827104 -67457208 + B3 SINE B2 1 216 0 6 988 414 271 56 0 chr13 52827740 52827847 -67456465 - PB1D7 SINE Alu -7 113 1 6 988 381 212 95 63 chr13 52827860 52827986 -67456326 - ID_B1 SINE B4 0 224 95 6 988 855 191 140 0 chr13 52828099 52828277 -67456035 - B3 SINE B2 -13 203 1 6 988 1062 203 16 5 chr13 52828475 52828668 -67455644 + MTD LTR MaLR 23 217 -202 6 988 1076 38 0 8 chr13 52828661 52828793 -67455519 + B1_Mus2 SINE Alu 17 147 0 6 988 967 184 113 10 chr13 52828817 52829020 -67455292 + MTD LTR MaLR 196 419 0 6 988 510 17 0 0 chr13 52829544 52829603 -67454709 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 988 423 0 0 0 chr13 52829603 52829649 -67454663 + (GA)n Simple_repeat Simple_repeat 1 47 0 6 988 515 255 142 13 chr13 52829738 52829893 -67454419 - B4A SINE B4 -117 175 1 6 988 830 239 161 16 chr13 52830206 52830461 -67453851 + B4 SINE B4 1 292 0 6 988 312 319 31 49 chr13 52831052 52831276 -67453036 + L1ME4a LINE L1 5671 5890 -234 6 988 701 285 7 11 chr13 52832251 52832453 -67451859 + B3A SINE B2 19 216 0 6 988 233 136 49 195 chr13 52833850 52833932 -67450380 + LTR40b LTR ERVL 345 414 -48 6 988 332 296 56 145 chr13 52834110 52834292 -67450020 + MER2 DNA MER2_type 91 262 -83 6 988 791 268 13 0 chr13 52834292 52834449 -67449863 - RSINE1 SINE B4 -4 161 3 6 988 332 296 56 145 chr13 52834449 52834515 -67449797 + MER2 DNA MER2_type 263 317 -28 6 988 1784 139 22 96 chr13 52835217 52835624 -67448688 + L1_Mur3 LINE L1 4714 5090 -790 6 988 2948 269 112 34 chr13 52835607 52836108 -67448204 + Lx5 LINE L1 5850 6408 -642 6 988 270 0 0 0 chr13 52836108 52836138 -67448174 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 988 2948 269 112 34 chr13 52836138 52836498 -67447814 + Lx5 LINE L1 6409 6808 -242 6 988 2139 232 184 14 chr13 52836498 52837128 -67447184 + RMER19A LTR ERVK 1 737 0 6 988 2948 269 112 34 chr13 52837128 52837365 -67446947 + Lx5 LINE L1 6809 7035 -15 6 988 906 169 0 20 chr13 52837403 52837554 -67446758 + B1_Mus1 SINE Alu 1 148 0 6 988 391 231 132 209 chr13 52837584 52837819 -67446493 + B4 SINE B4 4 220 -72 6 988 345 330 149 22 chr13 52838735 52839051 -67445261 + L1MD1 LINE L1 5586 5941 -301 6 988 450 0 0 0 chr13 52841435 52841485 -67442827 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 988 2228 128 47 5 chr13 52842434 52842818 -67441494 - ORR1A1-int LTR MaLR -863 929 530 6 988 3583 20 2 0 chr13 52842907 52843302 -67441010 + MTA_Mm LTR MaLR 1 396 0 6 988 2440 82 0 35 chr13 52844716 52845055 -67439257 + ORR1A2 LTR MaLR 1 327 0 6 988 1521 41 86 0 chr13 52846497 52846694 -67437618 - L1Md_F2 LINE L1 -194 6388 6175 6 988 1483 73 0 0 chr13 52846694 52846886 -67437426 - MTA_Mm LTR MaLR -204 192 1 6 988 261 0 0 0 chr13 52847706 52847735 -67436577 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 988 2030 203 52 21 chr13 52849207 52849684 -67434628 - RLTR11A LTR ERVK -2 526 11 6 988 248 317 0 24 chr13 52850345 52850429 -67433883 - MLT1A1 LTR MaLR -6 402 321 6 988 354 310 113 4 chr13 52853753 52854028 -67430284 + L1MD1 LINE L1 5030 5334 -812 6 988 665 329 109 19 chr13 52854072 52854643 -67429669 + L1MD1 LINE L1 5441 6062 -180 6 988 300 135 40 0 chr13 52855254 52855328 -67428984 + (TA)n Simple_repeat Simple_repeat 2 78 0 6 988 22 56 0 0 chr13 52855363 52855399 -67428913 + AT_rich Low_complexity Low_complexity 1 36 0 6 988 342 211 60 6 chr13 52855468 52855635 -67428677 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 6 988 845 247 54 79 chr13 52855693 52855970 -67428342 - MT2B LTR ERVL -45 556 287 6 988 532 141 0 0 chr13 52855953 52856031 -67428281 - MT2B LTR ERVL -455 78 1 6 988 1221 195 0 0 chr13 52857335 52857545 -67426767 - MTD LTR MaLR -209 210 1 6 988 425 289 45 26 chr13 52857584 52857740 -67426572 - MER21B LTR ERV1 -87 776 618 6 988 244 323 48 42 chr13 52857769 52857937 -67426375 - MER21B LTR ERV1 -365 498 330 6 988 855 249 91 112 chr13 52858161 52858546 -67425766 + MTE2b LTR MaLR 1 377 -2 6 988 382 227 111 21 chr13 52859370 52859514 -67424798 - RCHARR1 DNA MER1_type -9 965 809 6 988 790 305 97 8 chr13 52859514 52859874 -67424438 - Lx8 LINE L1 -746 6727 6336 6 988 252 236 0 18 chr13 52860949 52861005 -67423307 + CT-rich Low_complexity Low_complexity 1 55 0 6 988 2504 145 35 8 chr13 52862397 52862799 -67421513 - MTC LTR MaLR -8 413 1 6 988 438 313 109 13 chr13 52863891 52864121 -67420191 + MER2 DNA MER2_type 10 261 -84 6 988 309 393 26 7 chr13 52865403 52865554 -67418758 - L1ME3A LINE L1 -1 6172 6019 6 988 819 272 126 4 chr13 52865755 52866010 -67418302 - MTEa LTR MaLR -93 286 1 6 988 480 305 102 51 chr13 52866356 52866670 -67417642 + ORR1E LTR MaLR 24 353 -6 6 988 212 263 18 0 chr13 52866922 52866979 -67417333 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 6 988 342 197 84 28 chr13 52867587 52867707 -67416605 + MLT1A1 LTR MaLR 238 384 -6 6 988 233 217 0 0 chr13 52868155 52868215 -67416097 + (TCTCTG)n Simple_repeat Simple_repeat 6 65 0 6 988 279 0 0 0 chr13 52868215 52868246 -67416066 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 988 987 271 19 0 chr13 52869301 52869511 -67414801 + ID_B1 SINE B4 11 224 0 6 988 2813 43 3 0 chr13 52870108 52870453 -67413859 + ORR1A1 LTR MaLR 1 346 0 6 988 3723 147 104 108 chr13 52870453 52871323 -67412989 - RMER19B LTR ERVK -35 867 2 6 988 387 127 0 0 chr13 52875367 52875430 -67408882 + (TA)n Simple_repeat Simple_repeat 1 63 0 6 988 246 128 0 0 chr13 52876696 52876735 -67407577 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 988 623 291 59 13 chr13 52876808 52877045 -67407267 + Tigger5 DNA MER2_type 2159 2406 0 6 988 328 191 22 0 chr13 52877098 52877187 -67407125 + (TA)n Simple_repeat Simple_repeat 2 92 0 7 988 182 37 0 36 chr13 52877994 52878022 -67406290 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 7 988 1166 251 81 33 chr13 52879732 52880065 -67404247 + ORR1E LTR MaLR 6 354 -5 7 988 1959 142 57 171 chr13 52880375 52880675 -67403637 - MTC LTR MaLR 0 421 121 7 988 1099 90 14 0 chr13 52880675 52880820 -67403492 + B1_Mus1 SINE Alu 2 148 0 7 988 1959 142 57 171 chr13 52880820 52880994 -67403318 - MTC LTR MaLR -301 120 1 7 988 234 0 0 0 chr13 52881105 52881131 -67403181 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 988 346 103 68 17 chr13 52881151 52881210 -67403102 + L1MC4a LINE L1 7252 7313 -569 7 988 366 275 68 87 chr13 52881361 52881568 -67402744 + L1MC4a LINE L1 7458 7660 -222 7 988 307 250 7 7 chr13 52881807 52881956 -67402356 + (CA)n Simple_repeat Simple_repeat 1 149 0 7 988 241 264 114 23 chr13 52881987 52882119 -67402193 + RLTR40 LTR ERVK 569 712 -105 7 988 317 200 77 0 chr13 52882118 52882183 -67402129 - PB1D7 SINE Alu -20 100 31 7 988 2284 137 25 157 chr13 52883566 52884051 -67400261 + MTC LTR MaLR 1 421 0 7 988 22 0 0 0 chr13 52884568 52884590 -67399722 + AT_rich Low_complexity Low_complexity 1 22 0 7 988 233 289 48 81 chr13 52884710 52884834 -67399478 - RLTR25B LTR ERVK -468 560 441 7 988 806 153 23 0 chr13 52884732 52884863 -67399449 - B1_Mur1 SINE Alu -6 143 10 7 988 423 167 17 121 chr13 52884760 52884876 -67399436 - MT2B LTR ERVL -337 264 161 7 988 352 265 27 20 chr13 52884878 52885028 -67399284 + L1MB7 LINE L1 5357 5507 -671 7 988 304 312 75 0 chr13 52885450 52885615 -67398697 + L1MB7 LINE L1 5968 6148 -36 7 988 799 167 0 12 chr13 52885773 52885937 -67398375 + GA-rich Low_complexity Low_complexity 3 164 0 7 988 249 143 0 23 chr13 52886587 52886630 -67397682 + URR1B DNA MER1_type 4 45 -180 7 988 240 35 0 0 chr13 52886993 52887022 -67397290 + (TTA)n Simple_repeat Simple_repeat 2 30 0 7 988 1328 204 15 152 chr13 52887022 52887363 -67396949 + RMER19B LTR ERVK 5 298 -604 7 988 1464 96 0 24 chr13 52887330 52887543 -67396769 + RMER19B LTR ERVK 695 902 0 7 988 181 0 0 65 chr13 52887543 52887574 -67396738 + (TAA)n Simple_repeat Simple_repeat 2 30 0 7 988 267 54 0 0 chr13 52887755 52887792 -67396520 + (GA)n Simple_repeat Simple_repeat 1 37 0 7 988 936 235 56 5 chr13 52888156 52888353 -67395959 - ID_B1 SINE B4 -17 207 1 7 988 416 345 78 12 chr13 52888453 52888620 -67395692 + MER58A DNA MER1_type 9 186 -38 7 988 315 122 0 0 chr13 52888941 52888990 -67395322 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 988 361 243 8 105 chr13 52889595 52889719 -67394593 + MLT1E2 LTR MaLR 19 130 -497 7 988 579 282 31 76 chr13 52889787 52889918 -67394394 - MLT1A0 LTR MaLR -3 362 234 7 988 180 0 0 0 chr13 52889918 52889938 -67394374 + (TTAGGG)n Simple_repeat Simple_repeat 3 22 0 7 988 579 282 31 76 chr13 52889938 52890094 -67394218 - MLT1A0 LTR MaLR -132 233 88 7 988 734 129 0 25 chr13 52890117 52890236 -67394076 - B2_Mm2 SINE B2 -67 128 13 7 988 703 269 33 0 chr13 52890294 52890360 -67393952 + B4A SINE B4 20 91 -201 7 988 239 363 15 53 chr13 52890360 52890491 -67393821 + B1_Mur2 SINE Alu 1 126 -23 7 988 1189 170 9 22 chr13 52891351 52891579 -67392733 + URR1B DNA MER1_type 1 225 0 7 988 773 306 30 26 chr13 52892178 52892446 -67391866 + B4A SINE B4 10 278 -14 7 988 2490 163 97 25 chr13 52892603 52893131 -67391181 + RMER2 LTR ERV1 1 566 -1 7 988 332 242 82 31 chr13 52893139 52893237 -67391075 - MER5A1 DNA MER1_type -26 140 38 7 988 341 187 13 0 chr13 52893316 52893391 -67390921 + GA-rich Low_complexity Low_complexity 1 76 0 7 988 1077 70 0 7 chr13 52894026 52894161 -67390151 + B1_Mus2 SINE Alu 1 135 -12 7 988 558 29 0 0 chr13 52894161 52894229 -67390083 + (CAAAA)n Simple_repeat Simple_repeat 2 69 0 7 988 691 350 17 4 chr13 52894246 52894487 -67389825 - MTE2b LTR MaLR -54 325 82 7 988 310 271 220 54 chr13 52894531 52894699 -67389613 + B4 SINE B4 37 232 -60 7 988 2455 83 3 0 chr13 52894709 52895035 -67389277 + ORR1A2 LTR MaLR 1 327 0 7 988 444 252 0 28 chr13 52895035 52895152 -67389160 + PB1D9 SINE Alu 7 117 -3 7 988 307 303 177 57 chr13 52895152 52895200 -67389112 + B4 SINE B4 93 279 -13 7 988 409 219 12 0 chr13 52895328 52895410 -67388902 + RSINE1 SINE B4 2 84 -81 7 988 693 282 132 86 chr13 52895570 52895978 -67388334 - MLT1E3 LTR MaLR -1 623 197 7 988 506 287 83 91 chr13 52895989 52896265 -67388047 + B4 SINE B4 2 275 -17 7 988 1082 258 92 24 chr13 52896680 52897018 -67387294 - MTD LTR MaLR -31 388 28 7 988 1814 149 53 25 chr13 52897180 52897579 -67386733 + RMER17C LTR ERVK 1 410 0 7 988 407 248 14 70 chr13 52897663 52897806 -67386506 - ID_B1 SINE B4 -3 221 87 7 988 771 297 20 34 chr13 52897813 52898106 -67386206 - L1ME1 LINE L1 -353 5826 5538 7 988 400 332 126 25 chr13 52898209 52898407 -67385905 - L1ME1 LINE L1 -760 5386 5169 7 988 985 242 5 0 chr13 52898527 52898742 -67385570 - B3 SINE B2 0 216 1 7 988 562 318 18 23 chr13 52898891 52899110 -67385202 + B4A SINE B4 64 281 -11 7 988 201 304 0 0 chr13 52899120 52899176 -67385136 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 988 453 348 134 62 chr13 52899416 52900144 -67384168 - L1ME1 LINE L1 -1384 4762 3961 7 988 671 275 41 83 chr13 52900415 52900681 -67383631 + B4 SINE B4 2 256 -36 7 988 542 54 14 0 chr13 52900698 52900772 -67383540 + (CA)n Simple_repeat Simple_repeat 1 75 0 7 988 461 337 44 24 chr13 52900986 52901284 -67383028 + L1M5 LINE L1 3364 3667 -2479 7 988 250 222 0 0 chr13 52901901 52901946 -67382366 + polypurine Low_complexity Low_complexity 1 45 0 7 988 575 108 0 11 chr13 52901946 52902040 -67382272 + (GGGA)n Simple_repeat Simple_repeat 2 94 0 7 988 288 204 0 0 chr13 52902498 52902547 -67381765 + polypurine Low_complexity Low_complexity 1 49 0 7 988 563 215 6 17 chr13 52902547 52902722 -67381590 + GA-rich Low_complexity Low_complexity 1 173 0 7 988 220 137 105 40 chr13 52902828 52902904 -67381408 - PB1D7 SINE Alu 0 120 40 7 988 413 225 63 0 chr13 52902995 52903106 -67381206 + ID_B1 SINE B4 37 154 -70 7 988 898 216 58 10 chr13 52904857 52905063 -67379249 - B3 SINE B2 0 216 1 7 988 219 121 45 15 chr13 52906027 52906094 -67378218 + T-rich Low_complexity Low_complexity 2 70 0 7 988 711 330 13 53 chr13 52906203 52906507 -67377805 + B4A SINE B4 1 292 0 7 988 229 293 53 0 chr13 52906563 52906638 -67377674 + BC1_Mm scRNA scRNA 3 81 -71 7 988 261 0 0 0 chr13 52906820 52906849 -67377463 + (TA)n Simple_repeat Simple_repeat 1 29 0 7 988 522 31 0 0 chr13 52907324 52907388 -67376924 + (TG)n Simple_repeat Simple_repeat 2 65 0 7 988 204 40 0 0 chr13 52907580 52907605 -67376707 + (CCCTAA)n Simple_repeat Simple_repeat 5 29 0 7 988 356 211 177 8 chr13 52907648 52907772 -67376540 + B1F SINE Alu 5 149 0 7 988 997 234 66 52 chr13 52907826 52908114 -67376198 + B4 SINE B4 1 292 0 7 988 327 104 0 0 chr13 52908417 52908465 -67375847 + (GAAA)n Simple_repeat Simple_repeat 2 49 0 7 988 354 229 18 62 chr13 52908775 52908887 -67375425 - B4A SINE B4 0 292 186 7 988 306 265 9 75 chr13 52908917 52909023 -67375289 - B4A SINE B4 -192 100 2 7 988 723 275 27 16 chr13 52909154 52909339 -67374973 - B4 SINE B4 -19 273 87 7 988 210 244 0 0 chr13 52909379 52909420 -67374892 - B4A SINE B4 -178 114 74 7 988 747 185 0 0 chr13 52909467 52909613 -67374699 + CT-rich Low_complexity Low_complexity 3 148 0 7 988 1064 76 14 0 chr13 52909615 52909759 -67374553 - B1_Mus1 SINE Alu -1 147 2 7 988 234 351 13 0 chr13 52909809 52909886 -67374426 - PB1 SINE Alu -12 115 38 7 988 244 207 22 109 chr13 52910860 52910952 -67373360 - MLT1A LTR MaLR -13 395 312 7 988 414 0 0 0 chr13 52911055 52911101 -67373211 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 7 988 249 237 78 58 chr13 52911210 52911313 -67372999 - MLT1A LTR MaLR -298 110 6 7 988 195 69 0 0 chr13 52914069 52914098 -67370214 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 988 262 198 30 36 chr13 52914988 52915156 -67369156 + (CA)n Simple_repeat Simple_repeat 2 168 0 7 988 210 241 34 17 chr13 52915163 52915222 -67369090 + (CACG)n Simple_repeat Simple_repeat 4 63 0 7 988 221 222 0 0 chr13 52917883 52917928 -67366384 + C-rich Low_complexity Low_complexity 1 45 0 7 988 505 291 10 43 chr13 52918662 52918903 -67365409 + CT-rich Low_complexity Low_complexity 1 233 0 7 988 456 19 0 0 chr13 52919099 52919152 -67365160 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 988 268 327 0 76 chr13 52919658 52919777 -67364535 + PB1 SINE Alu 16 125 -2 7 988 372 43 0 0 chr13 52919842 52919888 -67364424 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 988 605 129 27 7 chr13 52919888 52920036 -67364276 + (CAGAGA)n Simple_repeat Simple_repeat 2 152 0 7 988 364 269 76 76 chr13 52920647 52920792 -67363520 - HAL1-3A_ME LINE L1 -739 2119 1975 7 988 498 249 0 0 chr13 52920843 52921016 -67363296 + (TG)n Simple_repeat Simple_repeat 1 173 0 7 988 580 330 22 0 chr13 52921021 52921203 -67363109 - B3 SINE B2 -12 204 19 7 988 252 283 55 48 chr13 52921497 52921642 -67362670 + L1M2c LINE L1 1596 1741 -5048 7 988 237 135 0 0 chr13 52921733 52921785 -67362527 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 988 363 23 0 0 chr13 52921785 52921829 -67362483 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 988 441 322 132 25 chr13 52921831 52922111 -67362201 + MER68 LTR ERVL 252 561 -2 7 988 624 311 88 12 chr13 52922170 52922512 -67361800 - L1M4b LINE L1 -3277 3729 3362 7 988 407 373 62 11 chr13 52922803 52923094 -67361218 - L1M4b LINE L1 -4093 3241 2966 7 988 286 283 50 8 chr13 52923243 52923364 -67360948 - L1M4b LINE L1 -4618 2390 2265 7 988 697 112 112 0 chr13 52923385 52923501 -67360811 + B3 SINE B2 4 132 -84 7 988 306 0 0 0 chr13 52923600 52923634 -67360678 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 988 623 299 58 5 chr13 52923946 52924151 -67360161 + ID_B1 SINE B4 2 217 -7 7 988 180 152 0 0 chr13 52924603 52924636 -67359676 + GA-rich Low_complexity Low_complexity 2 34 0 7 988 759 282 29 25 chr13 52924987 52925187 -67359125 - B4 SINE B4 -5 287 85 7 988 664 25 0 63 chr13 52925187 52925314 -67358998 + (TTTTG)n Simple_repeat Simple_repeat 2 120 0 8 988 759 282 29 25 chr13 52925314 52925353 -67358959 - B4 SINE B4 -208 84 47 7 988 823 137 8 0 chr13 52925838 52925969 -67358343 - B1_Mus1 SINE Alu -6 142 11 8 988 486 286 0 0 chr13 52926323 52926428 -67357884 + PB1D9 SINE Alu 5 109 -11 8 988 268 256 13 13 chr13 52927261 52927340 -67356972 - ID4_ SINE ID -3 80 2 8 988 543 254 73 23 chr13 52928357 52928529 -67355783 + B3A SINE B2 4 184 -14 8 988 396 0 0 0 chr13 52928529 52928573 -67355739 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 988 234 232 13 127 chr13 52928583 52928662 -67355650 + MT2B LTR ERVL 170 239 -362 8 988 664 182 8 8 chr13 52928595 52928717 -67355595 + B1_Mur2 SINE Alu 18 139 -10 8 988 587 252 7 20 chr13 52928727 52928877 -67355435 - B3A SINE B2 -11 187 40 8 988 274 274 0 0 chr13 52928898 52928960 -67355352 - PB1D10 SINE Alu -37 80 19 8 988 867 256 28 5 chr13 52929129 52929345 -67354967 + ID_B1 SINE B4 4 224 0 8 988 221 363 11 0 chr13 52930362 52930453 -67353859 + (TATG)n Simple_repeat Simple_repeat 3 94 0 8 988 227 317 0 0 chr13 52930379 52930439 -67353873 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 988 260 311 66 0 chr13 52931234 52931340 -67352972 - L1MC3 LINE L1 -229 6115 6003 8 988 466 311 36 15 chr13 52931354 52931550 -67352762 - L1MC3 LINE L1 -1843 5942 5743 8 988 272 250 26 26 chr13 52931550 52931628 -67352684 - B1F SINE Alu 0 149 72 8 988 246 354 10 0 chr13 52931723 52931819 -67352493 - L1MC3 LINE L1 -676 5668 5572 8 988 438 198 0 87 chr13 52932637 52932764 -67351548 - PB1D9 SINE Alu 0 120 5 8 988 256 310 33 11 chr13 52933611 52933715 -67350597 + MIR SINE MIR 20 124 -84 8 988 683 222 11 60 chr13 52934043 52934225 -67350087 + B4A SINE B4 7 179 -113 8 988 219 36 0 0 chr13 52934251 52934279 -67350033 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 8 988 279 0 0 0 chr13 52934429 52934460 -67349852 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 988 275 374 54 18 chr13 52935711 52935877 -67348435 + B4A SINE B4 117 288 -4 8 988 423 0 0 0 chr13 52936036 52936083 -67348229 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 988 402 221 30 27 chr13 52936927 52937229 -67347083 + (CTCA)n Simple_repeat Simple_repeat 1 302 0 8 988 440 163 25 25 chr13 52937246 52937403 -67346909 + (CTCA)n Simple_repeat Simple_repeat 4 160 0 8 988 363 152 33 17 chr13 52937421 52937541 -67346771 + (CTCA)n Simple_repeat Simple_repeat 2 123 0 8 988 665 216 14 7 chr13 52937746 52937886 -67346426 - B3A SINE B2 -57 141 1 8 988 222 62 0 0 chr13 52938803 52938835 -67345477 + (A)n Simple_repeat Simple_repeat 1 32 0 8 988 201 195 0 0 chr13 52939666 52939707 -67344605 + (CGGA)n Simple_repeat Simple_repeat 3 43 0 8 988 459 87 0 0 chr13 52940890 52940959 -67343353 + (TG)n Simple_repeat Simple_repeat 1 69 0 8 988 390 203 217 57 chr13 52940965 52941122 -67343190 - B3A SINE B2 -16 182 1 8 988 255 258 97 0 chr13 52941277 52941370 -67342942 - MLT1F2 LTR MaLR -52 517 416 8 988 203 238 70 47 chr13 52941792 52941964 -67342348 + (CATG)n Simple_repeat Simple_repeat 1 176 0 8 988 708 315 20 10 chr13 52943827 52944123 -67340189 + L1MA4A LINE L1 5614 5915 -388 8 988 529 171 47 0 chr13 52944258 52944428 -67339884 + (CA)n Simple_repeat Simple_repeat 1 178 0 8 988 326 211 17 17 chr13 52944407 52944523 -67339789 + (CATATA)n Simple_repeat Simple_repeat 6 121 0 8 988 560 130 56 6 chr13 52944523 52944685 -67339627 + (CA)n Simple_repeat Simple_repeat 1 170 0 8 988 241 333 76 0 chr13 52945966 52946098 -67338214 - L1M LINE L1 -784 5395 5254 8 988 1191 141 29 14 chr13 52947269 52947477 -67336835 - URR1A DNA MER1_type 0 226 16 8 988 678 236 0 13 chr13 52947817 52947976 -67336336 - B4 SINE B4 -132 160 4 8 988 2550 119 36 27 chr13 52948210 52948623 -67335689 + MTC LTR MaLR 5 421 0 8 988 216 404 11 11 chr13 52948685 52948780 -67335532 - PB1 SINE Alu -28 99 5 8 988 237 33 0 0 chr13 52950509 52950539 -67333773 + (TC)n Simple_repeat Simple_repeat 2 31 0 8 988 241 47 47 0 chr13 52950540 52950583 -67333729 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 988 290 264 23 14 chr13 52950722 52950845 -67333467 + ID4 SINE ID 5 125 -27 8 988 329 183 0 0 chr13 52950898 52950958 -67333354 + B1_Mus1 SINE Alu 1 60 -88 8 988 468 229 17 8 chr13 52951154 52951273 -67333039 + B3A SINE B2 1 120 -78 8 988 1932 172 104 40 chr13 52951378 52951905 -67332407 - RLTR31_Mm LTR ERVK 0 561 1 8 988 288 0 0 0 chr13 52952025 52952057 -67332255 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 988 694 218 40 11 chr13 52952315 52952491 -67331821 + B3A SINE B2 2 182 -16 8 989 450 92 25 38 chr13 52953148 52953227 -67331085 + URR1B DNA MER1_type 148 225 0 8 989 415 249 118 32 chr13 52955705 52955925 -67328387 - L1MC LINE L1 -3144 3002 2764 8 989 26 0 0 0 chr13 52956079 52956105 -67328207 + AT_rich Low_complexity Low_complexity 1 26 0 8 989 4382 56 27 7 chr13 52956118 52956710 -67327602 + L1Md_F2 LINE L1 5979 6582 0 8 989 353 141 3 0 chr13 52956746 52956812 -67327500 - B1F SINE Alu -13 107 40 8 989 1140 249 104 20 chr13 52957563 52957949 -67326363 - MTD LTR MaLR -14 405 1 8 989 661 226 196 16 chr13 52960468 52960652 -67323660 + Lx8 LINE L1 7116 7332 -141 8 989 272 70 0 23 chr13 52960758 52960802 -67323510 + (TA)n Simple_repeat Simple_repeat 1 43 0 8 989 221 316 92 31 chr13 52960858 52960956 -67323356 - PB1D10 SINE Alu -13 104 1 8 989 312 309 112 50 chr13 52963341 52963501 -67320811 + RMER30 DNA MER1_type 2 171 -31 8 989 343 315 62 8 chr13 52963370 52963498 -67320814 - Charlie12 DNA MER1_type -2705 168 34 8 989 381 43 0 0 chr13 52964196 52964243 -67320069 + (TAA)n Simple_repeat Simple_repeat 2 48 0 8 989 198 0 0 0 chr13 52964420 52964442 -67319870 + (A)n Simple_repeat Simple_repeat 1 22 0 8 989 380 221 77 11 chr13 52964457 52964582 -67319730 - B3A SINE B2 -57 159 13 8 989 594 232 59 36 chr13 52964585 52964804 -67319508 + B4A SINE B4 44 267 -25 8 989 279 0 0 0 chr13 52964805 52964836 -67319476 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 989 198 191 0 0 chr13 52964840 52964882 -67319430 + GA-rich Low_complexity Low_complexity 3 44 0 8 989 192 152 0 0 chr13 52965154 52965187 -67319125 + (CACG)n Simple_repeat Simple_repeat 2 34 0 8 989 483 252 0 0 chr13 52966047 52966150 -67318162 - PB1D7 SINE Alu 0 120 18 8 989 273 223 0 0 chr13 52966150 52966244 -67318068 + (TG)n Simple_repeat Simple_repeat 2 95 0 8 989 719 241 71 98 chr13 52966246 52966541 -67317771 - B4A SINE B4 0 292 6 8 989 356 294 109 16 chr13 52966851 52966979 -67317333 + RSINE1 SINE B4 17 156 -9 8 989 342 0 0 0 chr13 52967804 52967842 -67316470 + (TG)n Simple_repeat Simple_repeat 2 39 0 8 989 3424 18 2 0 chr13 52968668 52969063 -67315249 - MTA_Mm LTR MaLR 0 396 1 8 989 1201 34 0 13 chr13 52969093 52969242 -67315070 - B1_Mus2 SINE Alu 0 147 1 8 989 810 131 22 7 chr13 52970969 52971107 -67313205 + B1_Mus2 SINE Alu 2 141 -6 8 989 291 364 75 10 chr13 52971159 52971464 -67312848 + L1MB5 LINE L1 5595 5919 -255 8 989 233 308 56 0 chr13 52971638 52971745 -67312567 + L1MA10 LINE L1 6222 6334 0 8 989 353 308 16 32 chr13 52972271 52972395 -67311917 - RSINE1 SINE B4 -15 150 29 8 989 266 295 13 0 chr13 52972876 52972954 -67311358 - B1F SINE Alu -69 80 2 8 989 432 0 0 0 chr13 52975095 52975143 -67309169 + (CA)n Simple_repeat Simple_repeat 2 49 0 8 989 272 229 211 0 chr13 52975914 52976023 -67308289 + B1F SINE Alu 1 132 -17 8 989 274 203 13 26 chr13 52976142 52976218 -67308094 + L1MA7 LINE L1 6173 6247 -44 8 989 841 158 7 0 chr13 52976343 52976489 -67307823 + B1_Mus1 SINE Alu 2 148 0 8 989 1226 205 169 15 chr13 52976517 52976854 -67307458 + MTD LTR MaLR 30 418 -1 8 989 242 262 237 15 chr13 52976944 52977142 -67307170 + L1MC4a LINE L1 7440 7681 -201 8 989 368 261 33 16 chr13 52978261 52978382 -67305930 - RSINE1 SINE B4 -39 126 4 8 989 302 221 64 55 chr13 52979164 52979274 -67305038 - MLT1D LTR MaLR -7 498 388 8 989 213 65 0 0 chr13 52979292 52979323 -67304989 + (G)n Simple_repeat Simple_repeat 1 31 0 8 989 239 246 31 0 chr13 52979394 52979459 -67304853 + GA-rich Low_complexity Low_complexity 3 69 0 8 989 263 336 97 0 chr13 52979581 52979715 -67304597 - MLT1D LTR MaLR -313 192 46 8 989 220 286 39 0 chr13 52979817 52979894 -67304418 + ID4 SINE ID 2 81 -2 8 989 518 205 72 119 chr13 52980251 52980445 -67303867 + RMER17C-int LTR ERVK 2609 2793 -445 8 989 3077 78 4 36 chr13 52980777 52981244 -67303068 + L1_Mus3 LINE L1 6183 6634 -4 8 989 1924 136 55 55 chr13 52981273 52981671 -67302641 + RMER10B LTR ERVL 1 398 0 8 989 227 103 26 0 chr13 52984635 52984674 -67299638 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 8 989 1106 64 0 0 chr13 52984674 52984815 -67299497 - B1_Mus2 SINE Alu -6 141 1 8 989 280 259 12 47 chr13 52985301 52985386 -67298926 - Lx8 LINE L1 -1296 6177 6096 8 989 1235 297 112 0 chr13 52985509 52986010 -67298302 + Lx8 LINE L1 6528 7084 -389 8 989 361 195 13 0 chr13 52986158 52986235 -67298077 + B3 SINE B2 3 80 -136 8 989 210 303 52 13 chr13 52986765 52986842 -67297470 - B3A SINE B2 -25 173 94 8 989 451 260 0 0 chr13 52987908 52988008 -67296304 + RSINE1 SINE B4 5 104 -61 8 989 487 215 140 7 chr13 52989195 52989331 -67294981 + B3A SINE B2 4 157 -41 8 989 291 85 0 0 chr13 52989333 52989380 -67294932 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 989 255 61 0 0 chr13 52989611 52989644 -67294668 + (T)n Simple_repeat Simple_repeat 1 33 0 9 989 412 207 23 83 chr13 52989709 52989841 -67294471 + MT2B LTR ERVL 155 278 -323 9 989 939 54 0 8 chr13 52989725 52989856 -67294456 + B1_Mus1 SINE Alu 7 136 -12 9 989 231 61 0 0 chr13 52989858 52989891 -67294421 + (CAAG)n Simple_repeat Simple_repeat 2 34 0 9 989 1094 75 0 0 chr13 52990094 52990240 -67294072 + B1_Mus2 SINE Alu 2 147 0 9 989 201 154 0 0 chr13 52990240 52990279 -67294033 + A-rich Low_complexity Low_complexity 3 41 0 9 989 382 306 0 9 chr13 52990820 52990929 -67293383 - RSINE1 SINE B4 0 165 58 9 989 969 154 149 0 chr13 52991088 52991283 -67293029 + URR1B DNA MER1_type 1 224 -1 9 989 225 0 0 0 chr13 52991405 52991430 -67292882 + (TC)n Simple_repeat Simple_repeat 2 26 0 9 989 623 296 0 0 chr13 52991555 52991727 -67292585 - Lx7 LINE L1 -382 7314 7143 9 989 931 32 16 0 chr13 52992693 52992816 -67291496 + (TCTA)n Simple_repeat Simple_repeat 3 127 0 9 989 229 230 88 44 chr13 52993428 52993519 -67290793 - B1F SINE Alu -38 111 17 9 989 748 243 136 32 chr13 52993617 52993868 -67290444 - B4A SINE B4 -4 288 12 9 989 273 57 0 0 chr13 52994782 52994817 -67289495 + (CA)n Simple_repeat Simple_repeat 1 35 0 9 989 348 298 69 17 chr13 52995122 52995296 -67289016 + L1M2 LINE L1 5119 5301 -842 9 989 487 318 19 0 chr13 52995522 52995676 -67288636 - B4A SINE B4 -6 286 130 9 989 225 316 0 0 chr13 52995699 52995756 -67288556 - B4A SINE B4 -226 66 10 9 989 345 194 0 0 chr13 52995887 52995954 -67288358 + PB1D10 SINE Alu 46 112 -5 9 989 253 311 118 0 chr13 52995963 52996082 -67288230 + L1M2 LINE L1 5504 5636 -655 9 989 788 268 47 12 chr13 52996153 52996406 -67287906 + B4 SINE B4 3 264 -28 9 989 855 279 121 54 chr13 52996456 52996554 -67287758 + Tigger1 DNA MER2_type 391 484 -1934 9 989 804 233 14 47 chr13 52996554 52996766 -67287546 + B3 SINE B2 3 207 -9 9 989 855 279 121 54 chr13 52996766 52997073 -67287239 + Tigger1 DNA MER2_type 485 823 -1595 9 989 274 362 28 28 chr13 52997930 52998072 -67286240 - Tigger1 DNA MER2_type -6 2412 2271 9 989 359 202 0 25 chr13 52998449 52998548 -67285764 - B1_Mur1 SINE Alu 0 149 53 9 989 307 302 144 0 chr13 52998616 52998755 -67285557 - Tigger1 DNA MER2_type -421 1997 1839 9 989 448 250 70 8 chr13 52998880 52999009 -67285303 + RSINE1 SINE B4 15 151 -14 9 989 388 325 174 55 chr13 52999443 52999846 -67284466 - Charlie2b DNA MER1_type -367 2415 1965 9 989 331 238 108 10 chr13 53000328 53000430 -67283882 - PB1D7 SINE Alu 0 120 9 1 989 305 138 179 48 chr13 53001233 53001317 -67282995 - BC1_Mm scRNA scRNA -57 95 1 2 989 395 261 15 1 chr13 53002320 53002424 -67281888 + B4A SINE B4 123 230 -62 3 989 501 138 0 12 chr13 53002491 53002572 -67281740 - B3A SINE B2 -115 83 4 4 989 3645 158 122 87 chr13 53002636 53003506 -67280806 + RMER19B LTR ERVK 3 902 0 5 989 2091 114 35 16 chr13 53003754 53004067 -67280245 - ORR1A2 LTR MaLR -8 319 1 6 989 384 237 13 0 chr13 53004888 53004964 -67279348 + PB1D10 SINE Alu 1 77 -40 7 989 243 247 78 36 chr13 53005238 53005431 -67278881 + L1MD LINE L1 3410 3610 -2536 8 989 382 273 146 11 chr13 53006501 53006679 -67277633 + L1M4 LINE L1 4753 4954 -1192 9 989 501 299 71 78 chr13 53006857 53007151 -67277161 + MER21B LTR ERV1 138 429 -434 1 989 359 224 231 17 chr13 53007215 53007427 -67276885 - MTE2b LTR MaLR -3 376 64 1 989 302 227 27 0 chr13 53007366 53007441 -67276871 - MT2A LTR ERVL -409 124 48 1 989 1117 44 0 0 chr13 53007612 53007747 -67276565 + B1_Mus1 SINE Alu 14 148 0 1 989 488 260 0 9 chr13 53008553 53008658 -67275654 + PB1D10 SINE Alu 1 104 -13 1 989 206 132 0 19 chr13 53008900 53008954 -67275358 + CT-rich Low_complexity Low_complexity 1 53 0 1 989 403 222 0 12 chr13 53008981 53009141 -67275171 + (CA)n Simple_repeat Simple_repeat 1 158 0 1 989 262 237 38 50 chr13 53009220 53009300 -67275012 + L1M4 LINE L1 5620 5698 -481 9 989 261 0 0 0 chr13 53009705 53009734 -67274578 + (T)n Simple_repeat Simple_repeat 1 29 0 1 989 459 52 0 0 chr13 53010620 53010678 -67273634 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 989 279 0 0 0 chr13 53012669 53012700 -67271612 + (CCCCCA)n Simple_repeat Simple_repeat 5 35 0 1 989 321 325 17 17 chr13 53012919 53013035 -67271277 + MER2 DNA MER2_type 140 255 -90 2 989 232 208 21 0 chr13 53014148 53014196 -67270116 + B2_Mm2 SINE B2 40 88 -107 2 989 507 60 0 0 chr13 53014257 53014324 -67269988 + (CA)n Simple_repeat Simple_repeat 1 67 0 2 989 225 254 51 0 chr13 53016030 53016089 -67268223 + MLT2B3 LTR ERVL 26 87 -467 2 989 272 318 89 96 chr13 53016186 53016468 -67267844 + ORR1D2 LTR MaLR 89 368 -2 2 989 1731 119 144 39 chr13 53016913 53017246 -67267066 + ORR1B1 LTR MaLR 27 394 0 2 989 458 314 154 33 chr13 53017336 53017845 -67266467 + L1M4 LINE L1 3837 4400 -1746 2 989 659 213 88 31 chr13 53017926 53018086 -67266226 - B3 SINE B2 -46 170 2 2 989 999 128 0 26 chr13 53018210 53018363 -67265949 - B1_Mur4 SINE Alu 0 150 2 2 989 572 274 25 6 chr13 53019164 53019399 -67264913 - L1MC LINE L1 -2168 3978 3735 2 989 219 204 0 0 chr13 53019637 53019686 -67264626 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 3 989 289 254 60 0 chr13 53020077 53020144 -67264168 + PB1D10 SINE Alu 8 78 -39 3 989 777 242 103 156 chr13 53020323 53020798 -67263514 + RMER4A LTR ERVK 17 466 0 3 989 385 292 75 45 chr13 53020836 53021037 -67263275 - B4A SINE B4 -85 207 1 3 989 591 271 199 34 chr13 53021124 53021668 -67262644 + L1MC LINE L1 3600 4239 -1907 3 989 254 310 0 0 chr13 53021699 53021786 -67262526 + L1MC LINE L1 4299 4385 -1761 3 989 198 0 0 0 chr13 53021912 53021934 -67262378 + (T)n Simple_repeat Simple_repeat 1 22 0 3 989 516 175 56 37 chr13 53021947 53022054 -67262258 + B3A SINE B2 1 109 -89 3 989 270 0 0 0 chr13 53022937 53022967 -67261345 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 989 263 28 28 0 chr13 53023121 53023157 -67261155 + (TCTG)n Simple_repeat Simple_repeat 3 39 0 3 989 268 231 127 13 chr13 53023995 53024074 -67260238 + PB1D7 SINE Alu 12 99 -21 3 989 452 71 505 10 chr13 53025381 53025480 -67258832 + B1_Mur4 SINE Alu 3 150 0 4 989 214 162 0 0 chr13 53025705 53025742 -67258570 + G-rich Low_complexity Low_complexity 1 37 0 4 989 737 227 19 34 chr13 53025870 53026067 -67258245 + B3 SINE B2 2 195 0 4 989 259 291 178 7 chr13 53026366 53026518 -67257794 - MER54A LTR ERVL -471 430 253 4 989 354 182 0 0 chr13 53026518 53026628 -67257684 + CT-rich Low_complexity Low_complexity 4 113 0 4 989 533 292 25 25 chr13 53026690 53026848 -67257464 - MER54A LTR ERVL -743 158 1 4 989 488 317 37 12 chr13 53026956 53027119 -67257193 - MER21B LTR ERV1 -264 599 433 4 989 265 366 0 9 chr13 53027157 53027270 -67257042 + (CA)n Simple_repeat Simple_repeat 1 112 0 4 989 284 377 18 0 chr13 53027380 53027494 -67256818 + Tigger5 DNA MER2_type 2291 2406 0 4 989 745 284 21 16 chr13 53027818 53028011 -67256301 - MLT1B LTR MaLR -32 358 165 4 989 345 231 278 0 chr13 53028376 53028484 -67255828 + B1F SINE Alu 3 140 -9 4 989 557 265 0 20 chr13 53028939 53029089 -67255223 + B1_Mur1 SINE Alu 2 148 -1 5 989 785 205 141 40 chr13 53029267 53029465 -67254847 + ID_B1 SINE B4 3 220 -4 5 989 411 138 0 0 chr13 53029544 53029631 -67254681 + (CAGA)n Simple_repeat Simple_repeat 2 88 0 5 989 205 296 8 92 chr13 53029728 53029847 -67254465 + GA-rich Low_complexity Low_complexity 3 111 0 5 989 263 291 49 49 chr13 53030089 53030212 -67254100 + Charlie1a DNA MER1_type 837 959 -496 5 989 357 343 0 117 chr13 53030219 53030407 -67253905 + B4 SINE B4 2 167 -125 5 989 416 222 11 4 chr13 53030381 53030481 -67253831 - B1_Mur3 SINE Alu -43 104 1 5 989 1121 87 0 0 chr13 53030611 53030749 -67253563 - B1_Mus1 SINE Alu -6 142 5 5 989 301 276 26 0 chr13 53031048 53031164 -67253148 - L1MEb LINE L1 -5886 184 66 5 989 2392 153 43 0 chr13 53031356 53031748 -67252564 + MTC LTR MaLR 13 421 0 5 989 2229 185 38 108 chr13 53031774 53032356 -67251956 - RLTR20A LTR ERVK 0 541 1 6 989 335 283 69 29 chr13 53032444 53032463 -67251849 - PB1D9 SINE Alu -8 112 7 6 989 444 210 0 24 chr13 53032463 53032546 -67251766 - ID_B1 SINE B4 -56 168 88 6 989 369 0 0 0 chr13 53032709 53032750 -67251562 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 989 972 257 169 0 chr13 53032755 53033026 -67251286 - MTD LTR MaLR 0 419 103 6 989 312 248 102 18 chr13 53033026 53033135 -67251177 + PB1D9 SINE Alu 4 120 0 6 989 296 354 17 17 chr13 53033131 53033249 -67251063 - MTD LTR MaLR -301 118 1 6 989 416 266 17 26 chr13 53033350 53033466 -67250846 - PB1D10 SINE Alu -2 115 1 6 989 609 287 78 19 chr13 53034786 53034827 -67249485 + ID SINE ID 7 47 -177 6 989 333 0 0 0 chr13 53034827 53034864 -67249448 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 989 609 287 78 19 chr13 53034864 53035028 -67249284 + ID_B1 SINE B4 48 224 0 6 989 1047 84 0 0 chr13 53035169 53035385 -67248927 + (TG)n Simple_repeat Simple_repeat 1 216 0 6 989 290 289 47 126 chr13 53035422 53035612 -67248700 - MLT1B LTR MaLR -201 189 15 7 989 821 286 10 5 chr13 53036796 53037000 -67247312 + ID_B1 SINE B4 1 205 -19 7 989 561 221 134 0 chr13 53037031 53037203 -67247109 + B3 SINE B2 10 204 -12 7 989 267 329 72 85 chr13 53037230 53037247 -67247065 + B4A SINE B4 71 85 -207 7 989 828 156 49 21 chr13 53037247 53037391 -67246921 + B1_Mur2 SINE Alu 2 149 0 7 989 472 276 28 50 chr13 53037392 53037571 -67246741 + L1M3 LINE L1 5487 5661 -528 7 989 1785 176 34 42 chr13 53037600 53038051 -67246261 + ORR1B2 LTR MaLR 1 386 -8 7 989 965 269 19 0 chr13 53038051 53038308 -67246004 + L1MA4 LINE L1 5681 5942 -358 7 989 1046 248 156 38 chr13 53038459 53038798 -67245514 + MTE2a LTR MaLR 1 379 0 7 989 482 240 8 45 chr13 53038815 53038998 -67245314 - MLT2B2 LTR ERVL -384 170 1 7 989 963 251 43 74 chr13 53039564 53039956 -67244356 + MLT1B LTR MaLR 8 555 -5 8 989 429 66 0 0 chr13 53039998 53040059 -67244253 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 989 535 290 80 59 chr13 53040060 53040306 -67244006 - B4 SINE B4 -11 281 38 8 989 698 281 39 10 chr13 53040427 53040635 -67243677 - B3 SINE B2 -1 215 2 8 989 306 204 0 0 chr13 53040656 53040710 -67243602 + MLT1B LTR MaLR 111 164 -226 8 989 24 32 0 0 chr13 53041261 53041292 -67243020 + AT_rich Low_complexity Low_complexity 1 31 0 8 989 436 306 58 58 chr13 53041547 53041703 -67242609 + ID_B1 SINE B4 2 157 -67 8 989 605 273 58 37 chr13 53041704 53041894 -67242418 + B3A SINE B2 2 195 -3 8 989 1501 230 60 103 chr13 53042071 53042247 -67242065 + RLTR20B3 LTR ERVK 24 164 -413 8 989 2727 56 29 0 chr13 53042247 53042588 -67241724 - L1_Mus1 LINE L1 0 6567 6217 8 989 1501 230 60 103 chr13 53042588 53042882 -67241430 + RLTR20B3 LTR ERVK 165 475 -102 8 989 450 0 0 0 chr13 53042882 53042932 -67241380 + (TG)n Simple_repeat Simple_repeat 2 51 0 9 989 1501 230 60 103 chr13 53042932 53042994 -67241318 + RLTR20B3 LTR ERVK 476 534 -43 8 989 1699 147 97 34 chr13 53043357 53043709 -67240603 + ORR1D1 LTR MaLR 1 374 0 9 989 460 336 37 7 chr13 53043996 53044131 -67240181 + ID_B1 SINE B4 19 157 -67 9 989 886 281 68 74 chr13 53044384 53044841 -67239471 - RLTR12B LTR ERVK -26 502 49 9 989 2094 217 61 71 chr13 53044841 53045163 -67239149 + RLTR31A_Mm LTR ERVK 1 308 -276 9 989 1215 75 0 0 chr13 53045163 53045310 -67239002 + B1_Mus2 SINE Alu 1 147 0 9 989 2094 217 61 71 chr13 53045310 53045577 -67238735 + RLTR31A_Mm LTR ERVK 309 584 0 9 989 352 295 26 9 chr13 53045842 53045955 -67238357 + RMER15 LTR ERVL 354 468 -107 9 989 22 0 0 0 chr13 53046021 53046043 -67238269 + AT_rich Low_complexity Low_complexity 1 22 0 9 989 406 259 117 45 chr13 53046043 53046197 -67238115 - RSINE1 SINE B4 0 165 1 9 989 580 256 16 0 chr13 53046198 53046323 -67237989 - ID_B1 SINE B4 -2 222 96 9 989 384 22 0 0 chr13 53046599 53046644 -67237668 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 989 464 347 24 39 chr13 53046914 53047121 -67237191 + Tigger7 DNA MER2_type 154 357 -2134 1 989 218 255 0 0 chr13 53047127 53047174 -67237138 + CT-rich Low_complexity Low_complexity 2 48 0 1 989 453 62 0 0 chr13 53047174 53047239 -67237073 + (TTTTG)n Simple_repeat Simple_repeat 4 68 0 1 989 1117 83 21 0 chr13 53047240 53047384 -67236928 - B1_Mus2 SINE Alu 0 147 1 1 989 413 131 0 0 chr13 53048195 53048256 -67236056 + B3A SINE B2 2 62 -136 1 989 2527 60 3 0 chr13 53048337 53048655 -67235657 - ORR1A2 LTR MaLR -8 319 1 1 989 401 354 93 6 chr13 53049313 53049495 -67234817 - MER2 DNA MER2_type 0 345 148 1 989 406 223 54 53 chr13 53049510 53049678 -67234634 - MTE2b LTR MaLR -1 378 213 1 989 233 225 67 53 chr13 53049938 53050013 -67234299 + RMER15 LTR ERVL 405 480 -95 1 989 932 274 11 68 chr13 53050092 53050195 -67234117 - MTE2b LTR MaLR -117 262 176 1 989 1922 206 10 15 chr13 53050195 53050595 -67233717 + RMER10B LTR ERVL 1 398 0 1 989 932 274 11 68 chr13 53050595 53050769 -67233543 - MTE2b LTR MaLR -204 175 1 1 989 2451 85 3 0 chr13 53050811 53051129 -67233183 - ORR1A2 LTR MaLR -8 319 1 1 989 399 21 0 0 chr13 53052639 53052687 -67231625 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 1 989 261 0 0 0 chr13 53052689 53052718 -67231594 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 989 1077 102 0 0 chr13 53052718 53052855 -67231457 - B1_Mm SINE Alu -10 137 1 1 989 1230 36 0 0 chr13 53052889 53053029 -67231283 + B1_Mus1 SINE Alu 2 141 -7 1 989 695 284 47 14 chr13 53053170 53053381 -67230931 - B4A SINE B4 -73 219 2 1 989 1108 285 119 48 chr13 53054545 53054924 -67229388 - MTC LTR MaLR -15 406 1 1 989 465 19 0 0 chr13 53055562 53055616 -67228696 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 1 989 720 247 0 90 chr13 53055634 53055812 -67228500 - RSINE1 SINE B4 -2 163 2 1 989 213 65 0 0 chr13 53056418 53056449 -67227863 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 989 847 248 14 41 chr13 53056484 53056703 -67227609 - ID_B1 SINE B4 -11 213 1 1 989 519 272 0 0 chr13 53056959 53057062 -67227250 - PB1D10 SINE Alu -14 103 1 1 989 266 242 20 108 chr13 53057062 53057095 -67227217 + YREP_Mm Unknown Unknown 319 342 -1470 1 989 3383 50 2 0 chr13 53057124 53057523 -67226789 - MTB LTR MaLR 0 400 1 1 989 355 261 28 170 chr13 53057802 53057826 -67226486 + Tigger7 DNA MER2_type 2269 2285 -206 1 989 547 237 157 51 chr13 53057826 53058004 -67226308 + B3A SINE B2 1 197 -1 1 989 356 261 28 170 chr13 53058004 53058081 -67226231 + Tigger7 DNA MER2_type 2286 2351 -140 1 989 186 71 0 0 chr13 53058081 53058109 -67226203 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1 989 1121 52 0 0 chr13 53058109 53058243 -67226069 - B1_Mus1 SINE Alu -13 135 2 1 989 356 282 34 124 chr13 53058243 53058351 -67225961 + Tigger7 DNA MER2_type 2352 2449 -42 1 989 799 262 24 24 chr13 53058712 53058923 -67225389 - B4A SINE B4 0 292 82 1 989 302 183 0 14 chr13 53058925 53058997 -67225315 + CT-rich Low_complexity Low_complexity 2 72 0 1 989 707 163 101 0 chr13 53059018 53059147 -67225165 - B1_Mur2 SINE Alu -6 143 2 1 989 686 248 64 59 chr13 53059147 53059237 -67225075 - B4 SINE B4 -72 220 1 1 989 613 247 72 61 chr13 53059817 53059998 -67224314 - B3A SINE B2 -11 187 5 1 989 585 187 0 0 chr13 53060010 53060101 -67224211 - 5S rRNA rRNA -30 91 1 1 989 231 299 38 38 chr13 53060273 53060353 -67223959 - ID4_ SINE ID -3 80 1 1 989 361 229 14 0 chr13 53061226 53061296 -67223016 - ID4 SINE ID -9 74 4 1 989 1980 100 88 20 chr13 53061912 53062218 -67222094 + ORR1A2 LTR MaLR 1 327 0 1 989 742 242 78 78 chr13 53062232 53062514 -67221798 - B4A SINE B4 -10 282 1 1 989 531 31 0 0 chr13 53064684 53064749 -67219563 + (TCCA)n Simple_repeat Simple_repeat 2 66 0 1 989 357 93 0 0 chr13 53065416 53065470 -67218842 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 989 743 318 24 29 chr13 53065627 53065873 -67218439 - B4 SINE B4 -38 254 10 1 989 216 0 0 0 chr13 53066171 53066195 -67218117 + (CCAA)n Simple_repeat Simple_repeat 2 25 0 1 989 341 43 21 0 chr13 53066626 53066673 -67217639 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 989 1181 265 7 18 chr13 53066741 53067025 -67217287 + B4 SINE B4 3 283 -9 1 989 647 286 27 32 chr13 53067774 53067962 -67216350 - B3A SINE B2 -11 187 1 1 989 441 195 17 9 chr13 53068006 53068118 -67216194 - B3A SINE B2 -57 159 1 1 989 2313 151 33 23 chr13 53068172 53068571 -67215741 - MTC LTR MaLR 0 421 19 1 989 23 0 0 0 chr13 53068690 53068713 -67215599 + AT_rich Low_complexity Low_complexity 1 23 0 1 989 586 194 88 54 chr13 53068774 53068921 -67215391 - B4 SINE B4 -137 155 4 1 989 1077 81 0 0 chr13 53069608 53069744 -67214568 + B1_Mus2 SINE Alu 3 138 -9 1 989 186 43 0 0 chr13 53069744 53069767 -67214545 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 989 273 254 40 20 chr13 53069776 53069811 -67214501 - B3 SINE B2 -85 110 74 1 989 396 0 0 0 chr13 53069811 53069855 -67214457 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 989 273 222 54 27 chr13 53069855 53069909 -67214403 - B3 SINE B2 -143 73 20 1 989 455 269 32 48 chr13 53070012 53070137 -67214175 - RSINE1 SINE B4 -34 131 9 1 989 446 284 171 6 chr13 53070789 53070959 -67213353 - B3A SINE B2 0 198 1 1 989 474 325 45 19 chr13 53071033 53071187 -67213125 - ID_B1 SINE B4 -66 158 1 1 989 186 43 0 0 chr13 53073533 53073556 -67210756 + (A)n Simple_repeat Simple_repeat 1 23 0 1 989 42 77 0 0 chr13 53073902 53073993 -67210319 + GC_rich Low_complexity Low_complexity 1 91 0 1 989 186 133 0 0 chr13 53075249 53075279 -67209033 + (A)n Simple_repeat Simple_repeat 1 30 0 1 989 24 53 0 0 chr13 53076360 53076398 -67207914 + GC_rich Low_complexity Low_complexity 1 38 0 1 989 216 240 10 39 chr13 53076427 53076531 -67207781 + (CCGCG)n Simple_repeat Simple_repeat 3 103 0 1 989 213 39 0 0 chr13 53076549 53076575 -67207737 + (CCCCG)n Simple_repeat Simple_repeat 3 28 0 1 989 360 0 0 0 chr13 53078075 53078115 -67206197 + (A)n Simple_repeat Simple_repeat 1 40 0 1 989 291 279 12 37 chr13 53078614 53078696 -67205616 - ID4 SINE ID -1 82 3 1 989 536 252 82 48 chr13 53079278 53079424 -67204888 + RSINE1 SINE B4 13 163 -2 1 989 25 65 0 0 chr13 53079431 53079477 -67204835 + AT_rich Low_complexity Low_complexity 1 46 0 1 989 793 246 78 0 chr13 53079489 53079668 -67204644 + ID_B1 SINE B4 12 204 -20 1 989 330 186 0 0 chr13 53079673 53079759 -67204553 + (TGAA)n Simple_repeat Simple_repeat 4 89 0 1 989 1230 178 14 27 chr13 53080054 53080273 -67204039 - B3 SINE B2 0 216 1 1 989 855 173 0 26 chr13 53080292 53080446 -67203866 - B1_Mur4 SINE Alu 0 150 1 1 989 426 96 0 0 chr13 53081964 53082037 -67202275 + (TC)n Simple_repeat Simple_repeat 2 74 0 1 989 294 29 0 0 chr13 53082037 53082072 -67202240 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 989 725 249 29 19 chr13 53082469 53082678 -67201634 + ID_B1 SINE B4 1 211 -13 1 989 225 0 0 0 chr13 53082750 53082775 -67201537 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 989 243 0 0 0 chr13 53082775 53082801 -67201511 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 989 580 294 144 5 chr13 53083530 53083718 -67200594 - ID_B1 SINE B4 0 224 11 1 989 423 0 0 0 chr13 53083736 53083783 -67200529 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 989 219 279 84 48 chr13 53083865 53083948 -67200364 - B2_Mm1t SINE B2 -107 86 1 1 989 307 253 0 48 chr13 53084005 53084088 -67200224 + ID4_ SINE ID 5 83 0 1 990 1239 247 25 59 chr13 53084429 53084786 -67199526 + ORR1E LTR MaLR 13 357 -2 1 990 752 148 119 31 chr13 53084796 53084956 -67199356 - MTC LTR MaLR -247 174 1 1 990 569 299 48 18 chr13 53085667 53085834 -67198478 + B4A SINE B4 115 286 -6 1 990 306 0 0 0 chr13 53086173 53086207 -67198105 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 990 628 154 8 8 chr13 53086392 53086516 -67197796 + GA-rich Low_complexity Low_complexity 1 124 0 1 990 23 0 0 0 chr13 53086609 53086632 -67197680 + AT_rich Low_complexity Low_complexity 1 23 0 1 990 600 278 21 78 chr13 53086647 53086838 -67197474 - B3A SINE B2 -16 182 3 1 990 2724 133 350 9 chr13 53087198 53087746 -67196566 + RMER19A LTR ERVK 1 735 -2 1 990 549 281 8 23 chr13 53088258 53088389 -67195923 - B3A SINE B2 -68 130 2 1 990 365 287 20 0 chr13 53088617 53088718 -67195594 + RSINE1 SINE B4 58 160 -5 1 990 363 23 0 0 chr13 53089003 53089047 -67195265 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 990 853 232 17 0 chr13 53089160 53089337 -67194975 + B3A SINE B2 1 180 -18 1 990 25 51 0 0 chr13 53089364 53089403 -67194909 + AT_rich Low_complexity Low_complexity 1 39 0 1 990 582 219 117 0 chr13 53090162 53090290 -67194022 + B3 SINE B2 4 146 -70 1 990 207 0 0 0 chr13 53090291 53090314 -67193998 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 990 26 0 0 0 chr13 53090604 53090630 -67193682 + AT_rich Low_complexity Low_complexity 1 26 0 1 990 222 91 0 0 chr13 53090632 53090665 -67193647 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 990 679 204 162 0 chr13 53090671 53090813 -67193499 - B3A SINE B2 -32 166 2 1 990 225 0 0 0 chr13 53091209 53091234 -67193078 + (CATA)n Simple_repeat Simple_repeat 2 26 0 1 990 591 154 0 0 chr13 53091252 53091388 -67192924 + (TATG)n Simple_repeat Simple_repeat 1 136 0 1 990 2105 233 66 123 chr13 53091396 53092403 -67191909 - RMER17B LTR ERVK -9 899 1 1 990 359 229 7 0 chr13 53092405 53092549 -67191763 + (TA)n Simple_repeat Simple_repeat 2 146 0 2 990 407 286 20 0 chr13 53092645 53092743 -67191569 + PB1D10 SINE Alu 6 105 -12 2 990 589 272 22 0 chr13 53092784 53092920 -67191392 + B1_Mur1 SINE Alu 2 140 -9 2 990 279 0 0 0 chr13 53093104 53093135 -67191177 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2 990 772 177 6 64 chr13 53093135 53093292 -67191020 - B1_Mur3 SINE Alu -1 148 1 2 990 1306 190 0 9 chr13 53093292 53093509 -67190803 - B3 SINE B2 0 216 1 2 990 347 219 46 37 chr13 53093531 53093640 -67190672 - Lx8 LINE L1 -2 7471 7362 2 990 287 282 0 14 chr13 53093974 53094046 -67190266 + MIR SINE MIR 68 138 -124 2 990 681 71 0 26 chr13 53094525 53094641 -67189671 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 2 990 510 277 69 51 chr13 53094868 53095013 -67189299 - MTE2b LTR MaLR -97 282 135 2 990 571 239 22 7 chr13 53095013 53095152 -67189160 + ORR1C2 LTR MaLR 1 141 -233 2 990 688 171 15 30 chr13 53095349 53095482 -67188830 + ORR1C2 LTR MaLR 251 381 -3 2 990 932 246 109 52 chr13 53095503 53095833 -67188479 + RLTR9A LTR ERVK 10 358 -10 2 990 558 254 16 0 chr13 53095838 53095964 -67188348 - MTE2b LTR MaLR -246 133 6 2 990 738 279 79 33 chr13 53096512 53096753 -67187559 - B4A SINE B4 0 292 41 2 990 423 0 0 0 chr13 53096810 53096857 -67187455 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 990 307 326 26 37 chr13 53097370 53097439 -67186873 - L1M2 LINE L1 -1356 4784 4720 2 990 2985 35 3 0 chr13 53097439 53097784 -67186528 + ORR1A1 LTR MaLR 1 346 0 2 990 307 326 26 37 chr13 53097784 53097905 -67186407 - L1M2 LINE L1 -1421 4719 4596 2 990 396 283 61 0 chr13 53097905 53098004 -67186308 + PB1 SINE Alu 4 108 -19 2 990 288 0 0 0 chr13 53098105 53098137 -67186175 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 990 369 0 0 0 chr13 53098137 53098177 -67186135 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 990 278 312 17 45 chr13 53098206 53098398 -67185914 - L1M2 LINE L1 -1809 4334 4151 2 990 360 0 0 0 chr13 53098512 53098552 -67185760 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 990 300 207 191 82 chr13 53098663 53098755 -67185557 - L1M2 LINE L1 -3367 2773 2676 2 990 183 80 0 0 chr13 53098755 53098780 -67185532 + (CTG)n Simple_repeat Simple_repeat 3 27 0 2 990 300 217 221 15 chr13 53098780 53098834 -67185478 - L1M2 LINE L1 -3468 2675 2611 2 990 488 336 71 13 chr13 53098835 53098989 -67185323 + RSINE1 SINE B4 3 165 0 2 990 418 264 225 19 chr13 53099154 53099464 -67184848 - L1M2 LINE L1 -3537 2606 2234 2 990 607 303 86 16 chr13 53099464 53099719 -67184593 + B4A SINE B4 2 274 -18 2 990 324 0 0 0 chr13 53099724 53099760 -67184552 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 990 348 94 0 0 chr13 53099858 53099911 -67184401 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 990 319 214 78 127 chr13 53100064 53100230 -67184082 - RMER10A LTR ERVL -252 190 33 2 990 488 250 0 0 chr13 53100614 53100706 -67183606 + B4A SINE B4 175 266 -26 2 990 236 242 0 120 chr13 53100733 53100808 -67183504 + B1_Mur2 SINE Alu 73 138 -11 2 990 1210 289 26 44 chr13 53101209 53101711 -67182601 - RMER1A Other Other -473 593 154 2 990 941 264 62 36 chr13 53101725 53102032 -67182280 - RMER1B Other Other -705 361 47 2 990 2768 52 3 0 chr13 53102032 53102358 -67181954 + ORR1A2 LTR MaLR 1 327 0 2 990 316 253 0 71 chr13 53102433 53102518 -67181794 - B3A SINE B2 -118 80 2 2 990 1655 217 104 18 chr13 53104439 53104824 -67179488 + MTD LTR MaLR 1 418 -1 2 990 318 26 0 0 chr13 53105106 53105145 -67179167 + (A)n Simple_repeat Simple_repeat 1 39 0 2 990 953 250 88 33 chr13 53105723 53105996 -67178316 - B4A SINE B4 0 292 5 2 990 245 208 14 0 chr13 53106239 53106311 -67178001 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 990 733 147 0 38 chr13 53106314 53106498 -67177814 + (TATG)n Simple_repeat Simple_repeat 2 178 0 2 990 1121 191 42 9 chr13 53106618 53106835 -67177477 - ID_B1 SINE B4 0 224 1 2 990 315 294 112 0 chr13 53107905 53108075 -67176237 + RLTR15 LTR ERVK 157 345 -14 2 990 1327 223 41 4 chr13 53108807 53109077 -67175235 + MMAR1 DNA Mariner 976 1255 -31 2 990 867 168 11 50 chr13 53109079 53109261 -67175051 + B2_Mm2 SINE B2 2 176 -19 2 990 233 119 24 0 chr13 53109366 53109408 -67174904 + (TTTTC)n Simple_repeat Simple_repeat 1 43 0 2 990 748 297 69 48 chr13 53109409 53109601 -67174711 - L1M3 LINE L1 -1949 4191 3999 2 990 2635 93 3 27 chr13 53109601 53109975 -67174337 + RLTR8 LTR ERVK 1 365 0 2 990 748 297 69 48 chr13 53109975 53110245 -67174067 - L1M3 LINE L1 -2142 3998 3719 2 990 252 0 0 0 chr13 53110248 53110276 -67174036 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 990 891 275 3 122 chr13 53110717 53111036 -67173276 + B4 SINE B4 4 284 -8 2 990 261 0 0 0 chr13 53111092 53111121 -67173191 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 990 663 247 80 32 chr13 53111213 53111401 -67172911 + B3A SINE B2 2 198 0 2 990 192 77 0 0 chr13 53112231 53112257 -67172055 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 2 990 683 213 167 0 chr13 53112279 53112453 -67171859 - ID_B1 SINE B4 -18 206 4 2 990 249 275 78 81 chr13 53112716 53112851 -67171461 + PB1D10 SINE Alu 1 132 -17 2 990 269 183 17 0 chr13 53112860 53112920 -67171392 + GA-rich Low_complexity Low_complexity 3 63 0 2 990 660 239 8 0 chr13 53113924 53114054 -67170258 - B1_Mur1 SINE Alu -5 144 14 2 990 883 139 7 7 chr13 53114146 53114284 -67170028 + B1_Mur1 SINE Alu 12 149 0 2 990 2817 192 48 15 chr13 53114604 53115144 -67169168 - RMER1A Other Other -5 1025 468 2 990 222 160 0 0 chr13 53115198 53115248 -67169064 + (GGGTG)n Simple_repeat Simple_repeat 2 51 0 2 990 728 233 99 5 chr13 53115248 53115445 -67168867 - RMER1B Other Other -534 532 279 2 990 771 223 111 5 chr13 53115481 53115679 -67168633 + ID_B1 SINE B4 1 219 -5 2 990 602 249 97 15 chr13 53116212 53116408 -67167904 + ID_B1 SINE B4 2 213 -11 2 990 1892 160 77 50 chr13 53116408 53116809 -67167503 - MTD LTR MaLR -7 412 1 2 990 207 219 11 58 chr13 53116966 53117053 -67167259 + T-rich Low_complexity Low_complexity 3 85 0 2 990 2198 63 9 62 chr13 53117350 53117672 -67166640 - ORR1A2 LTR MaLR -7 320 16 2 990 633 188 87 0 chr13 53117837 53117975 -67166337 - B3 SINE B2 -65 151 2 2 990 435 238 24 0 chr13 53118155 53118239 -67166073 - RSINE1 SINE B4 -1 164 79 2 990 2551 53 9 0 chr13 53118321 53118639 -67165673 + L1Md_F2 LINE L1 6261 6581 -1 2 990 565 262 33 20 chr13 53118810 53118962 -67165350 + RSINE1 SINE B4 3 156 -9 2 990 315 0 0 0 chr13 53119032 53119067 -67165245 + (TAAAA)n Simple_repeat Simple_repeat 3 37 0 2 990 347 231 72 62 chr13 53119075 53119172 -67165140 - B1F1 SINE Alu -51 98 1 2 990 351 0 0 0 chr13 53119521 53119560 -67164752 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 990 630 79 0 0 chr13 53119560 53119648 -67164664 + (GA)n Simple_repeat Simple_repeat 1 89 0 2 990 300 53 0 0 chr13 53120068 53120106 -67164206 + (CACCC)n Simple_repeat Simple_repeat 4 41 0 2 990 288 0 0 0 chr13 53120325 53120357 -67163955 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 990 1021 182 54 5 chr13 53120365 53120569 -67163743 + B3 SINE B2 1 214 -2 2 990 294 406 47 14 chr13 53120699 53120914 -67163398 + MLT1G1 LTR MaLR 286 507 -72 2 990 560 216 8 25 chr13 53120942 53121061 -67163251 + PB1D10 SINE Alu 1 117 0 2 990 26 36 0 51 chr13 53121061 53121096 -67163216 + AT_rich Low_complexity Low_complexity 1 33 0 2 990 815 192 32 53 chr13 53121096 53121283 -67163029 - B2_Mm2 SINE B2 -12 183 1 2 990 26 36 0 51 chr13 53121283 53121306 -67163006 + AT_rich Low_complexity Low_complexity 1 23 0 2 990 344 290 23 26 chr13 53121504 53121852 -67162460 + G-rich Low_complexity Low_complexity 1 346 0 2 990 227 250 61 20 chr13 53121780 53121927 -67162385 + (CTGGGG)n Simple_repeat Simple_repeat 1 153 0 2 990 1966 86 17 120 chr13 53122091 53122449 -67161863 - ORR1A4 LTR MaLR -8 321 1 2 990 440 314 60 86 chr13 53122621 53122920 -67161392 - B4 SINE B4 0 292 2 2 990 951 235 58 10 chr13 53123455 53123661 -67160651 + B3 SINE B2 1 216 0 2 990 755 245 51 56 chr13 53123679 53123895 -67160417 - B3 SINE B2 -1 215 1 2 990 1022 276 30 19 chr13 53124271 53124537 -67159775 + B4A SINE B4 24 292 0 2 990 192 245 0 0 chr13 53124549 53124602 -67159710 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 990 279 325 17 34 chr13 53125034 53125152 -67159160 - MARNA DNA Mariner -387 199 84 2 990 400 368 79 39 chr13 53125347 53125627 -67158685 - B4A SINE B4 0 292 2 2 990 1348 196 69 66 chr13 53126075 53126452 -67157860 + ORR1C1 LTR MaLR 1 378 0 2 990 3291 40 8 5 chr13 53127184 53127583 -67156729 + MTB LTR MaLR 1 400 0 2 990 703 235 46 13 chr13 53128295 53128446 -67155866 + ID_B1 SINE B4 68 223 -1 2 990 1449 50 55 0 chr13 53130269 53130451 -67153861 + B2_Mm2 SINE B2 2 193 -2 2 990 686 159 63 0 chr13 53130539 53130665 -67153647 + ORR1D1 LTR MaLR 2 135 -239 2 990 478 283 0 0 chr13 53130652 53130751 -67153561 + RSINE1 SINE B4 48 146 -19 2 990 375 295 231 8 chr13 53130811 53131054 -67153258 - L1MC4 LINE L1 -233 7809 7513 2 990 283 323 52 0 chr13 53131163 53131259 -67153053 + MER44D DNA MER2_type 1 101 -604 2 990 3450 35 2 2 chr13 53131589 53131989 -67152323 + MTB LTR MaLR 1 400 0 2 990 249 62 62 0 chr13 53133051 53133099 -67151213 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 990 350 119 50 43 chr13 53133145 53133285 -67151027 + (TG)n Simple_repeat Simple_repeat 1 141 0 2 990 5475 225 72 22 chr13 53133580 53135615 -67148697 - Lx9 LINE L1 -35 7609 5337 2 990 3067 182 71 39 chr13 53135610 53136331 -67147981 - Lx9 LINE L1 -2948 2899 2156 2 990 705 253 84 63 chr13 53136330 53136363 -67147949 - L1_Rod LINE L1 -6795 377 343 2 990 1660 21 11 0 chr13 53136363 53136553 -67147759 + B2_Mm1t SINE B2 2 193 0 2 990 705 253 84 63 chr13 53136553 53136806 -67147506 - L1_Rod LINE L1 -6830 342 85 2 990 648 232 13 44 chr13 53136859 53137017 -67147295 - RSINE1 SINE B4 -3 162 10 3 990 608 181 180 7 chr13 53137116 53137255 -67147057 + MTE2b LTR MaLR 1 163 -216 3 990 918 256 135 35 chr13 53137257 53137414 -67146898 + Lx8 LINE L1 7049 7230 -243 3 990 513 0 0 0 chr13 53137414 53137471 -67146841 + (GA)n Simple_repeat Simple_repeat 1 57 0 3 990 918 256 135 35 chr13 53137471 53137632 -67146680 + Lx8 LINE L1 7231 7399 -74 3 990 37845 23 1 8 chr13 53137632 53142789 -67141523 + L1Md_T LINE L1 473 5586 -297 3 990 8742 28 0 0 chr13 53142789 53143785 -67140527 + L1Md_T LINE L1 5587 6582 0 3 990 222 253 149 46 chr13 53143954 53144041 -67140271 - PB1D9 SINE Alu -9 111 16 3 990 234 172 312 0 chr13 53144006 53144070 -67140242 + B3 SINE B2 129 212 -4 3 990 387 225 110 52 chr13 53144040 53144176 -67140136 - MTD LTR MaLR -266 153 10 3 990 314 289 44 190 chr13 53144201 53144633 -67139679 - RMER10A LTR ERVL -61 381 13 3 990 967 0 20 34 chr13 53144900 53145048 -67139264 + (GAGAA)n Simple_repeat Simple_repeat 4 149 0 3 990 206 32 32 0 chr13 53145275 53145306 -67139006 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 990 255 254 105 23 chr13 53145335 53145468 -67138844 + L1MC2 LINE L1 5848 5991 -353 3 990 616 33 11 22 chr13 53145505 53145597 -67138715 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 3 990 454 255 49 21 chr13 53146156 53146300 -67138012 - RMER15 LTR ERVL -1 574 427 3 990 235 213 0 0 chr13 53146438 53146485 -67137827 - RMER15 LTR ERVL -445 130 84 3 990 3825 82 29 7 chr13 53146596 53147146 -67137166 + RMER2 LTR ERV1 1 562 -5 3 990 1464 156 0 4 chr13 53147157 53147383 -67136929 - URR1B DNA MER1_type 0 225 1 3 990 1537 214 63 87 chr13 53147383 53147797 -67136515 + RLTR18B LTR ERVK 38 441 -71 3 990 464 291 23 79 chr13 53149297 53149562 -67134750 - L1MB8 LINE L1 -26 6152 5903 3 990 388 204 5 83 chr13 53149648 53149756 -67134556 + B3A SINE B2 47 149 -67 3 990 351 0 0 0 chr13 53149756 53149795 -67134517 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 990 311 248 53 99 chr13 53149795 53149841 -67134471 + B3 SINE B2 150 190 -26 3 990 522 214 19 10 chr13 53149873 53149977 -67134335 + PB1D9 SINE Alu 2 106 -14 3 990 428 200 70 0 chr13 53149994 53150109 -67134203 + Lx5 LINE L1 6926 7048 -2 3 990 954 254 75 102 chr13 53150147 53150519 -67133793 + MTE2a LTR MaLR 1 362 -17 3 990 339 317 73 11 chr13 53150572 53150763 -67133549 + L1MB5 LINE L1 5636 5838 -336 3 990 246 32 0 0 chr13 53151105 53151136 -67133176 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 990 1087 258 65 29 chr13 53151150 53151425 -67132887 - B4A SINE B4 -5 287 3 3 990 941 265 84 26 chr13 53151427 53151987 -67132325 - L1MB8 LINE L1 -685 5489 4901 3 990 1100 257 22 29 chr13 53151996 53152269 -67132043 + B4 SINE B4 1 271 -21 3 990 24 53 0 0 chr13 53152554 53152592 -67131720 + AT_rich Low_complexity Low_complexity 1 38 0 3 990 507 289 42 0 chr13 53152611 53152753 -67131559 - RSINE1 SINE B4 -15 150 3 3 990 406 305 58 84 chr13 53152903 53153318 -67130994 - L1MB8 LINE L1 -1662 4484 4081 3 990 6216 111 3 1 chr13 53153762 53154658 -67129654 - L1_Mm LINE L1 -23 5860 4963 3 990 318 281 12 0 chr13 53154738 53154820 -67129492 + PB1D10 SINE Alu 23 105 -12 3 990 748 79 0 73 chr13 53154834 53155221 -67129091 + CT-rich Low_complexity Low_complexity 1 358 0 3 990 1064 101 0 22 chr13 53155222 53155404 -67128908 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 3 990 994 92 0 47 chr13 53155407 53155556 -67128756 - B1_Mus1 SINE Alu 0 148 7 3 990 393 259 43 128 chr13 53155415 53155579 -67128733 - B4A SINE B4 -72 220 71 3 990 311 314 86 45 chr13 53156005 53156345 -67127967 + RLTR41 LTR ERV1 155 570 -17 3 990 487 280 42 52 chr13 53156901 53157093 -67127219 + B4 SINE B4 1 190 -102 3 990 375 335 58 50 chr13 53157109 53157386 -67126926 - L1MB8 LINE L1 -2802 3344 3066 3 990 339 305 18 37 chr13 53157400 53157509 -67126803 - PB1D10 SINE Alu -8 109 3 3 990 313 340 114 13 chr13 53157532 53157681 -67126631 - HAL1-3A_ME LINE L1 -407 2451 2288 3 990 409 318 106 0 chr13 53157699 53157831 -67126481 + B3A SINE B2 1 146 -52 3 990 583 241 29 67 chr13 53157827 53157986 -67126326 - RSINE1 SINE B4 -12 153 2 3 990 472 68 0 27 chr13 53157988 53158063 -67126249 + (TTCC)n Simple_repeat Simple_repeat 2 74 0 3 990 3902 212 11 91 chr13 53158063 53158952 -67125360 - RMER1C Other Other 0 1342 525 3 990 288 283 84 13 chr13 53158966 53159120 -67125192 - L1MB8 LINE L1 -3650 2496 2332 3 990 240 88 0 0 chr13 53159519 53159553 -67124759 - B2_Mm1t SINE B2 -159 34 1 3 990 248 288 0 27 chr13 53159610 53159633 -67124679 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 990 189 0 0 0 chr13 53159633 53159654 -67124658 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 990 248 288 0 27 chr13 53159654 53159705 -67124607 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 990 728 0 26 35 chr13 53159708 53159824 -67124488 + (GAGAA)n Simple_repeat Simple_repeat 5 119 0 3 990 815 273 39 79 chr13 53160423 53160753 -67123559 - RMER15 LTR ERVL 0 575 259 3 990 688 160 0 58 chr13 53160937 53161076 -67123236 + URR1B DNA MER1_type 95 225 0 3 990 274 298 62 56 chr13 53161076 53161118 -67123194 - CYRA11_Mm Unknown Y-chromosome -449 168 126 3 990 2063 177 60 17 chr13 53161171 53161573 -67122739 - MTD LTR MaLR 0 419 1 3 990 375 250 0 0 chr13 53161709 53161825 -67122487 + (TG)n Simple_repeat Simple_repeat 2 117 0 3 990 431 320 1 85 chr13 53162904 53163059 -67121253 + B4 SINE B4 1 140 -84 3 990 225 0 0 0 chr13 53163607 53163632 -67120680 + (A)n Simple_repeat Simple_repeat 1 25 0 3 990 207 296 90 57 chr13 53164237 53164359 -67119953 + MIRb SINE MIR 135 260 -8 3 990 443 185 0 0 chr13 53165146 53165227 -67119085 + ID4 SINE ID 1 81 -2 3 990 1136 204 18 0 chr13 53165760 53165981 -67118331 + MERVL_2A-int LTR ERVL 4467 4691 -1070 3 990 1210 185 0 97 chr13 53165977 53166234 -67118078 - MERVL_2A-int LTR ERVL -847 4914 4683 3 990 510 264 77 48 chr13 53166239 53166446 -67117866 - B3 SINE B2 -1 215 3 3 990 230 262 74 96 chr13 53166462 53166597 -67117715 - MTEa LTR MaLR 0 379 248 3 990 393 305 32 0 chr13 53167581 53167676 -67116636 + PB1 SINE Alu 3 100 -27 3 990 640 215 35 45 chr13 53167697 53167897 -67116415 - HAL1-2a_MD LINE L1 -505 2519 2322 3 990 3069 72 7 27 chr13 53168274 53168687 -67115625 + MTB_Mm LTR MaLR 1 405 -2 3 990 348 24 0 0 chr13 53169184 53169225 -67115087 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 990 420 20 0 0 chr13 53169411 53169460 -67114852 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 990 301 202 34 203 chr13 53169575 53169622 -67114690 - L1MC4a LINE L1 -1 7881 7841 3 990 1185 197 5 14 chr13 53169622 53169833 -67114479 + B3 SINE B2 2 210 -6 3 990 301 202 34 203 chr13 53169833 53169903 -67114409 - L1MC4a LINE L1 -42 7840 7784 3 990 540 272 40 105 chr13 53169968 53170272 -67114040 - Lx8 LINE L1 -29 7444 7161 3 990 255 271 168 15 chr13 53170928 53171059 -67113253 + MLT1E LTR MaLR 467 617 -36 3 990 2535 157 41 216 chr13 53171067 53171283 -67113029 + L1_Mur3 LINE L1 1205 1418 -4462 3 990 225 0 0 0 chr13 53171283 53171308 -67113004 + (TA)n Simple_repeat Simple_repeat 2 26 0 3 990 2535 157 41 216 chr13 53171308 53171514 -67112798 + L1_Mur3 LINE L1 1419 1635 -4245 3 990 266 26 0 50 chr13 53171514 53171554 -67112758 + (TAA)n Simple_repeat Simple_repeat 3 40 0 3 990 2535 157 41 216 chr13 53171554 53171766 -67112546 + L1_Mur3 LINE L1 1636 1693 -4187 3 990 180 111 0 0 chr13 53171766 53171793 -67112519 + (ATG)n Simple_repeat Simple_repeat 1 27 0 3 990 2535 157 41 216 chr13 53171793 53172214 -67112098 + L1_Mur3 LINE L1 1694 2075 -3805 3 990 346 272 25 66 chr13 53172227 53172343 -67111969 + L1MEb LINE L1 3040 3114 -3032 3 990 1276 27 0 0 chr13 53172343 53172490 -67111822 + B1_Mus2 SINE Alu 1 147 0 3 990 346 283 50 56 chr13 53172490 53172569 -67111743 + L1MEb LINE L1 3115 3198 -2948 3 990 476 356 0 0 chr13 53173666 53173846 -67110466 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 990 492 224 0 0 chr13 53174187 53174352 -67109960 + (TG)n Simple_repeat Simple_repeat 2 166 0 3 990 240 270 0 0 chr13 53174366 53174514 -67109798 + (TG)n Simple_repeat Simple_repeat 2 149 0 3 990 927 255 44 51 chr13 53174521 53174814 -67109498 - B4A SINE B4 0 292 2 3 990 326 255 79 30 chr13 53175559 53175660 -67108652 + MER2 DNA MER2_type 13 118 -227 3 990 375 256 145 62 chr13 53175734 53175987 -67108325 - RSINE1 SINE B4 -10 282 3 3 990 355 316 102 46 chr13 53175998 53176214 -67108098 + MER2 DNA MER2_type 117 344 -1 3 990 494 261 35 37 chr13 53177820 53177994 -67106318 - MER58A DNA MER1_type -2139 281 31 3 990 231 246 18 0 chr13 53178030 53178087 -67106225 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 3 990 360 227 18 30 chr13 53178097 53178265 -67106047 + (CATA)n Simple_repeat Simple_repeat 2 167 0 3 990 337 274 0 25 chr13 53178309 53178466 -67105846 + (CATA)n Simple_repeat Simple_repeat 2 154 0 3 990 629 146 0 0 chr13 53178879 53178968 -67105344 + PB1D9 SINE Alu 3 91 -29 3 990 384 204 29 169 chr13 53178968 53179015 -67105297 + MT2B LTR ERVL 167 283 -318 3 990 807 181 27 14 chr13 53179129 53179275 -67105037 + B1_Mur1 SINE Alu 2 149 0 3 990 183 100 0 0 chr13 53179325 53179355 -67104957 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 3 990 1211 75 0 0 chr13 53179356 53179503 -67104809 - B1_Mus2 SINE Alu 0 147 1 3 990 1883 250 104 64 chr13 53179515 53179811 -67104501 - RMER19B LTR ERVK -106 796 380 3 990 216 86 0 0 chr13 53179811 53179846 -67104466 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 990 1883 250 125 65 chr13 53179846 53180397 -67103915 - RMER19B LTR ERVK -400 502 1 3 990 206 333 0 16 chr13 53181138 53181202 -67103110 - MIRb SINE MIR -188 80 18 3 990 343 263 110 71 chr13 53181561 53181688 -67102624 - RSINE1 SINE B4 0 165 34 3 990 232 274 0 0 chr13 53182014 53182065 -67102247 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 990 324 132 0 19 chr13 53182548 53182602 -67101710 - HAL1-3A_ME LINE L1 -831 2027 1975 3 990 329 311 7 0 chr13 53182602 53182761 -67101551 + (TG)n Simple_repeat Simple_repeat 1 160 0 3 990 715 244 25 6 chr13 53182789 53182950 -67101362 - B4 SINE B4 -110 182 19 3 990 411 311 7 16 chr13 53183854 53184051 -67100261 - L1MD2 LINE L1 -99 6080 5888 3 990 317 305 91 11 chr13 53184594 53184770 -67099542 - L1MD2 LINE L1 -804 5342 5153 3 990 579 206 10 0 chr13 53184860 53184962 -67099350 - RSINE1 SINE B4 -61 104 2 3 990 1245 224 162 126 chr13 53185102 53185609 -67098703 - MT2A LTR ERVL -8 525 1 3 990 755 291 84 0 chr13 53185719 53185922 -67098390 + ID_B1 SINE B4 4 223 -1 4 990 2939 171 33 12 chr13 53186257 53186771 -67097541 + RLTR17 LTR ERVK 98 622 -70 4 990 387 293 107 41 chr13 53186978 53187220 -67097092 - L1MD2 LINE L1 -2166 3980 3723 3 990 189 0 0 0 chr13 53187271 53187292 -67097020 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 990 360 315 54 0 chr13 53187330 53187422 -67096890 - RSINE1 SINE B4 -1 164 68 4 990 387 0 0 0 chr13 53187539 53187582 -67096730 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 990 21 0 0 0 chr13 53187622 53187643 -67096669 + AT_rich Low_complexity Low_complexity 1 21 0 4 990 326 322 64 23 chr13 53187645 53187909 -67096403 - L1MD2 LINE L1 -3383 2763 2489 3 990 1382 179 15 14 chr13 53188520 53188774 -67095538 + MTC LTR MaLR 170 408 -13 4 990 1035 251 5 0 chr13 53189548 53189763 -67094549 + ID_B1 SINE B4 6 221 -3 4 990 367 261 77 19 chr13 53190822 53190975 -67093337 - MTEa LTR MaLR -1 378 205 4 990 265 298 102 47 chr13 53191112 53191239 -67093073 - MLT1A1 LTR MaLR -249 159 26 4 990 1153 88 0 0 chr13 53192496 53192643 -67091669 + B1_Mus1 SINE Alu 2 148 0 4 990 324 290 96 72 chr13 53194077 53194244 -67090068 + B4 SINE B4 2 172 -120 4 990 542 154 98 140 chr13 53194561 53194704 -67089608 + B1_Mur4 SINE Alu 1 137 -13 4 990 1319 82 33 11 chr13 53194817 53195001 -67089311 + B2_Mm2 SINE B2 4 191 -4 4 990 311 169 197 0 chr13 53195815 53195886 -67088426 + ORR1E LTR MaLR 1 85 -285 4 990 1095 171 223 55 chr13 53195889 53196050 -67088262 + ORR1D1 LTR MaLR 1 175 -199 4 990 183 42 0 0 chr13 53196050 53196074 -67088238 + (TC)n Simple_repeat Simple_repeat 2 25 0 4 990 1095 171 223 55 chr13 53196074 53196123 -67088189 + ORR1D1 LTR MaLR 176 258 -116 4 990 423 0 0 0 chr13 53196123 53196170 -67088142 + (CCTG)n Simple_repeat Simple_repeat 2 48 0 4 990 1095 171 223 55 chr13 53196170 53196267 -67088045 + ORR1D1 LTR MaLR 259 359 -15 4 990 689 257 129 34 chr13 53196309 53196518 -67087794 + ORR1E LTR MaLR 91 319 -40 4 990 450 53 0 0 chr13 53196530 53196587 -67087725 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 990 777 133 0 62 chr13 53196593 53196721 -67087591 - B3A SINE B2 -76 122 3 4 990 459 0 0 0 chr13 53196872 53196923 -67087389 + (TAGA)n Simple_repeat Simple_repeat 1 51 0 4 990 846 229 74 5 chr13 53197371 53197573 -67086739 - B3 SINE B2 0 216 1 4 990 243 266 102 19 chr13 53197625 53197782 -67086530 + L1MB8 LINE L1 5782 5951 -227 4 990 1302 20 0 0 chr13 53198454 53198600 -67085712 + B1_Mm SINE Alu 2 147 0 4 990 267 31 0 0 chr13 53198600 53198632 -67085680 + (A)n Simple_repeat Simple_repeat 1 32 0 4 990 410 212 71 0 chr13 53199125 53199210 -67085102 + PB1D10 SINE Alu 1 91 -26 4 990 2689 134 58 21 chr13 53200526 53200913 -67083399 + RLTR16 LTR ERVK 7 401 -104 4 990 225 0 0 0 chr13 53200913 53200938 -67083374 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 990 2689 134 58 21 chr13 53200938 53201031 -67083281 + RLTR16 LTR ERVK 402 504 -1 4 990 318 106 0 0 chr13 53201876 53201923 -67082389 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 990 197 267 79 13 chr13 53203227 53203303 -67081009 + MER5A DNA MER1_type 1 81 -108 4 990 555 16 0 0 chr13 53203852 53203916 -67080396 + (GGGA)n Simple_repeat Simple_repeat 1 64 0 4 990 500 285 139 0 chr13 53203946 53204090 -67080222 + RSINE1 SINE B4 2 165 0 4 990 317 296 0 6 chr13 53204106 53204279 -67080033 + (CA)n Simple_repeat Simple_repeat 1 172 0 4 990 315 0 0 0 chr13 53207902 53207937 -67076375 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 990 460 113 9 196 chr13 53208816 53208925 -67075387 - RMER17C LTR ERVK -134 276 185 4 990 1599 10 0 0 chr13 53208925 53209231 -67075081 + (GAA)n Simple_repeat Simple_repeat 1 306 0 4 990 973 136 6 6 chr13 53209236 53209414 -67074898 + (GAGAA)n Simple_repeat Simple_repeat 3 180 0 4 990 460 113 9 196 chr13 53209414 53209516 -67074796 - RMER17C LTR ERVK -226 184 98 4 990 885 259 132 70 chr13 53210292 53210365 -67073947 + MTE2a LTR MaLR 1 88 -291 4 990 1232 192 0 9 chr13 53210365 53210586 -67073726 + URR1B DNA MER1_type 5 223 -2 4 990 885 259 132 70 chr13 53210586 53210869 -67073443 + MTE2a LTR MaLR 89 379 0 4 990 950 136 53 26 chr13 53211122 53211311 -67073001 - B2_Mm2 SINE B2 0 195 2 4 990 180 0 0 0 chr13 53215043 53215063 -67069249 + (G)n Simple_repeat Simple_repeat 1 20 0 4 991 374 297 63 28 chr13 53217271 53217413 -67066899 - B1F SINE Alu -1 148 2 4 991 382 329 85 21 chr13 53217594 53217865 -67066447 + L1MC1 LINE L1 5884 6173 -171 4 991 648 227 45 0 chr13 53218040 53218172 -67066140 - B1_Mur2 SINE Alu -1 148 11 4 991 211 276 122 95 chr13 53218172 53218186 -67066126 - B4A SINE B4 -66 224 75 4 991 36 23 0 0 chr13 53218330 53218373 -67065939 + AT_rich Low_complexity Low_complexity 1 43 0 4 991 662 206 134 13 chr13 53218626 53218783 -67065529 - MTEa LTR MaLR -16 363 188 4 991 244 315 123 29 chr13 53218919 53218937 -67065375 - MLT2B5 LTR ERVL -409 308 229 4 991 405 248 99 46 chr13 53218937 53219068 -67065244 - MTEa LTR MaLR -238 141 4 4 991 244 315 123 29 chr13 53219068 53219089 -67065223 - MLT2B5 LTR ERVL -409 228 123 4 991 714 285 48 82 chr13 53219770 53220064 -67064248 - B4A SINE B4 -8 284 1 4 991 683 263 29 25 chr13 53221577 53221815 -67062497 + L1MA8 LINE L1 6031 6269 -22 4 991 213 283 50 0 chr13 53221941 53222001 -67062311 - ID4_ SINE ID -17 66 4 4 991 443 202 76 61 chr13 53222001 53222133 -67062179 - B1F SINE Alu -15 134 1 4 991 1103 57 35 0 chr13 53222330 53222432 -67061880 - B1_Mus2 SINE Alu 0 147 46 4 991 204 40 0 0 chr13 53222432 53222457 -67061855 + (C)n Simple_repeat Simple_repeat 1 25 0 4 991 1103 57 35 0 chr13 53222457 53222495 -67061817 - B1_Mus2 SINE Alu -102 45 3 4 991 274 306 94 13 chr13 53222626 53222785 -67061527 + L1ME2z LINE L1 6266 6437 -7 4 991 636 174 0 25 chr13 53222991 53223109 -67061203 + RSINE1 SINE B4 4 118 -47 4 991 858 90 190 43 chr13 53223147 53223279 -67061033 + B2_Mm2 SINE B2 2 159 -36 4 991 318 80 0 0 chr13 53223279 53223329 -67060983 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 4 991 858 90 190 43 chr13 53223329 53223359 -67060953 + B2_Mm2 SINE B2 160 188 -7 4 991 1108 291 73 68 chr13 53223646 53224191 -67060121 - MER44B DNA MER2_type -1 549 2 4 991 1095 109 0 13 chr13 53224516 53224665 -67059647 + B1_Mus1 SINE Alu 2 148 0 4 991 800 197 0 11 chr13 53224670 53224850 -67059462 + GA-rich Low_complexity Low_complexity 2 179 0 4 991 302 250 28 0 chr13 53225180 53225252 -67059060 - ID4 SINE ID -5 78 5 4 991 196 150 50 0 chr13 53225384 53225444 -67058868 + C-rich Low_complexity Low_complexity 3 65 0 4 991 221 258 167 0 chr13 53225899 53225965 -67058347 + ID2 SINE ID 7 83 0 4 991 735 163 21 49 chr13 53227659 53227801 -67056511 - B1F SINE Alu -1 148 11 4 991 380 20 20 0 chr13 53227960 53228009 -67056303 + (TTG)n Simple_repeat Simple_repeat 2 51 0 4 991 430 250 40 10 chr13 53228012 53228113 -67056199 - PB1D10 SINE Alu -13 104 1 4 991 521 296 118 21 chr13 53228640 53229063 -67055249 - MLT1D LTR MaLR 0 505 5 4 991 266 310 30 0 chr13 53229522 53229622 -67054690 - L1M5 LINE L1 -339 5823 5721 4 991 614 267 12 42 chr13 53230190 53230358 -67053954 - RSINE1 SINE B4 0 165 3 4 991 414 273 0 0 chr13 53230441 53230518 -67053794 + RSINE1 SINE B4 2 78 -87 4 991 267 380 11 0 chr13 53230518 53230533 -67053779 + B3A SINE B2 1 93 -105 4 991 875 202 0 73 chr13 53230598 53230760 -67053552 + B3 SINE B2 30 180 -36 4 991 3466 11 37 0 chr13 53230760 53231142 -67053170 + MTA_Mm LTR MaLR 1 396 0 4 991 9799 16 0 3 chr13 53231142 53232243 -67052069 + MTA_Mm-int LTR MaLR 1 1098 0 4 991 3441 13 37 0 chr13 53232243 53232625 -67051687 + MTA_Mm LTR MaLR 1 396 0 4 991 875 202 0 73 chr13 53232625 53232652 -67051660 + B3 SINE B2 181 205 -11 4 991 472 119 43 25 chr13 53234596 53234699 -67049613 + ORR1A2 LTR MaLR 1 114 -264 4 991 1928 109 31 22 chr13 53234699 53235018 -67049294 - RLTRETN_Mm LTR ERVK 0 322 1 4 991 3938 24 78 4 chr13 53235018 53235529 -67048783 - MMETn-int LTR ERVK 0 4844 4296 4 991 7400 130 141 10 chr13 53235529 53235741 -67048571 + ORR1A2-int LTR MaLR 396 704 -1259 4 991 270 0 0 0 chr13 53235741 53235771 -67048541 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 4 991 7400 130 141 10 chr13 53235771 53236944 -67047368 + ORR1A2-int LTR MaLR 705 1962 -1 4 991 2459 89 9 0 chr13 53236944 53237268 -67047044 + ORR1A2 LTR MaLR 1 327 0 4 991 200 98 73 0 chr13 53238451 53238492 -67045820 + (CACCC)n Simple_repeat Simple_repeat 5 48 0 4 991 704 285 117 31 chr13 53238842 53239099 -67045213 + B4 SINE B4 10 288 -4 4 991 459 0 0 0 chr13 53239182 53239233 -67045079 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 991 345 24 0 0 chr13 53239310 53239352 -67044960 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 991 645 303 21 16 chr13 53239382 53239573 -67044739 - ID_B1 SINE B4 -31 193 2 4 991 424 273 90 28 chr13 53239784 53239961 -67044351 + MLT1C LTR MaLR 257 444 -23 4 991 529 325 129 0 chr13 53240441 53240696 -67043616 + B4A SINE B4 1 288 -4 4 991 226 258 15 0 chr13 53241327 53241393 -67042919 + Lx8 LINE L1 7266 7332 -141 4 991 435 19 0 0 chr13 53242441 53242493 -67041819 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 991 618 221 68 0 chr13 53242504 53242634 -67041678 - ID_B1 SINE B4 -22 202 58 4 991 318 308 17 0 chr13 53243131 53243248 -67041064 + L1MB2 LINE L1 5853 5971 -200 4 991 1184 229 102 85 chr13 53243434 53243797 -67040515 + ORR1D2 LTR MaLR 2 370 0 4 991 641 258 8 0 chr13 53244505 53244633 -67039679 + B4 SINE B4 104 232 -60 4 991 510 17 0 0 chr13 53245283 53245342 -67038970 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 991 351 0 0 0 chr13 53245342 53245380 -67038932 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 991 327 295 60 45 chr13 53245780 53245979 -67038333 - L1MB7 LINE L1 -19 6165 5964 4 991 1145 116 41 0 chr13 53246026 53246198 -67038114 + B2_Mm1t SINE B2 1 179 -14 4 991 272 164 0 52 chr13 53246245 53246303 -67038009 + B2_Mm2 SINE B2 47 101 -94 4 991 757 56 9 9 chr13 53246346 53246454 -67037858 + (GAGAA)n Simple_repeat Simple_repeat 4 111 0 4 991 234 396 66 13 chr13 53246958 53247109 -67037203 + Tigger7 DNA MER2_type 1 159 -2332 4 991 911 313 39 24 chr13 53247194 53247528 -67036784 + Tigger7 DNA MER2_type 2143 2481 -10 4 991 610 295 122 28 chr13 53247846 53248059 -67036253 - MTEa LTR MaLR -46 333 101 4 991 622 222 43 157 chr13 53248079 53248225 -67036087 + B3 SINE B2 1 120 -96 4 991 267 31 0 0 chr13 53248225 53248257 -67036055 + (CG)n Simple_repeat Simple_repeat 2 33 0 4 991 288 53 0 0 chr13 53248257 53248294 -67036018 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 991 622 222 43 157 chr13 53248294 53248376 -67035936 + B3 SINE B2 121 203 -13 4 991 387 275 28 0 chr13 53248410 53248519 -67035793 + PB1D7 SINE Alu 4 115 -5 5 991 521 256 0 62 chr13 53250924 53251053 -67033259 + B3A SINE B2 73 193 -5 5 991 241 245 0 36 chr13 53251131 53251186 -67033126 - B1F SINE Alu 0 149 97 5 991 367 302 70 94 chr13 53251266 53251522 -67032790 - MLT1B LTR MaLR -135 255 6 5 991 246 32 0 0 chr13 53253189 53253220 -67031092 + (A)n Simple_repeat Simple_repeat 1 31 0 5 991 297 0 0 0 chr13 53253631 53253664 -67030648 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 5 991 216 182 0 0 chr13 53255138 53255182 -67029130 + G-rich Low_complexity Low_complexity 3 46 0 5 991 393 277 75 38 chr13 53255358 53255581 -67028731 + L1M4b LINE L1 1661 1905 -5103 5 991 2333 127 18 0 chr13 53255604 53255944 -67028368 - ORR1A1 LTR MaLR 0 346 1 5 991 239 286 65 43 chr13 53256295 53256434 -67027878 + L1M4b LINE L1 2328 2469 -4633 5 991 316 325 37 18 chr13 53256483 53256646 -67027666 + Lx8 LINE L1 7186 7351 -122 5 991 459 330 117 55 chr13 53256673 53256833 -67027479 + L1M4b LINE L1 3196 3352 -3982 5 991 1244 41 0 0 chr13 53256833 53256978 -67027334 + B1_Mus2 SINE Alu 1 145 -2 5 991 351 0 0 0 chr13 53256981 53257020 -67027292 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 991 459 330 117 55 chr13 53257020 53257256 -67027056 + L1M4b LINE L1 3353 3619 -3715 5 991 320 295 130 56 chr13 53257266 53257445 -67026867 + L1M4 LINE L1 2363 2533 -3613 5 991 228 35 0 0 chr13 53257445 53257474 -67026838 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 5 991 320 295 130 56 chr13 53257474 53257808 -67026504 + L1M4 LINE L1 2534 2914 -3232 5 991 234 136 0 0 chr13 53257808 53257852 -67026460 + (AGGGGG)n Simple_repeat Simple_repeat 4 47 0 5 991 659 206 161 28 chr13 53258271 53258451 -67025861 - B3 SINE B2 -11 205 2 5 991 270 0 0 0 chr13 53258848 53258878 -67025434 + (A)n Simple_repeat Simple_repeat 1 30 0 5 991 333 0 0 0 chr13 53258920 53258957 -67025355 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 991 235 149 206 54 chr13 53259362 53259454 -67024858 - Tigger5 DNA MER2_type -1123 1283 1178 5 991 1376 79 23 0 chr13 53259804 53259981 -67024331 - B2_Mm2 SINE B2 -14 181 1 5 991 3280 53 2 12 chr13 53260428 53260831 -67023481 + MTB LTR MaLR 2 400 0 5 991 259 385 105 9 chr13 53261367 53261476 -67022836 + Tigger5 DNA MER2_type 1 117 -2289 5 991 252 0 0 0 chr13 53261476 53261504 -67022808 + (TC)n Simple_repeat Simple_repeat 2 29 0 5 991 259 385 105 9 chr13 53261504 53261604 -67022708 + Tigger5 DNA MER2_type 118 229 -2177 5 991 256 302 70 45 chr13 53261865 53262021 -67022291 + RMER15 LTR ERVL 3 162 -413 5 991 458 273 61 27 chr13 53262116 53262263 -67022049 + RMER15 LTR ERVL 418 569 -6 5 991 489 211 21 0 chr13 53262310 53262405 -67021907 + B1F1 SINE Alu 45 141 -8 5 991 523 197 149 22 chr13 53262419 53262593 -67021719 + B3 SINE B2 4 194 -4 5 991 256 287 132 59 chr13 53263248 53263400 -67020912 + MER34 LTR ERV1 265 427 -115 5 991 921 249 50 55 chr13 53263720 53263958 -67020354 + B4 SINE B4 56 292 0 5 991 517 283 19 56 chr13 53264800 53264961 -67019351 - MLT1A0 LTR MaLR -204 161 7 5 991 231 152 43 0 chr13 53265033 53265079 -67019233 - MTEb LTR MaLR -18 361 314 5 991 584 316 63 63 chr13 53265269 53265668 -67018644 + RLTR11A2 LTR ERVK 87 485 -42 5 991 417 303 166 76 chr13 53267066 53267512 -67016800 + MER74A LTR ERVL 4 489 -69 5 991 326 339 8 25 chr13 53267534 53267652 -67016660 + PB1D10 SINE Alu 2 117 0 5 991 737 245 33 7 chr13 53268619 53268771 -67015541 + B3A SINE B2 2 157 -41 5 991 590 221 0 0 chr13 53269162 53269284 -67015028 - RLTR12A LTR ERVK -3 565 444 5 991 1212 61 0 0 chr13 53269284 53269431 -67014881 + B1_Mus1 SINE Alu 1 147 -1 5 991 698 127 76 45 chr13 53269702 53269834 -67014478 + B1_Mus1 SINE Alu 5 140 -8 5 991 267 161 0 0 chr13 53269843 53269899 -67014413 + GA-rich Low_complexity Low_complexity 2 57 0 5 991 462 201 123 111 chr13 53271680 53271842 -67012470 + RSINE1 SINE B4 2 165 0 5 991 387 217 0 0 chr13 53271887 53271956 -67012356 + B1_Mur2 SINE Alu 65 133 -16 5 991 441 0 0 0 chr13 53271956 53272005 -67012307 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 991 272 105 0 34 chr13 53272005 53272064 -67012248 + (CAGAGA)n Simple_repeat Simple_repeat 3 59 0 5 991 236 277 205 0 chr13 53272379 53272491 -67011821 + Lx8 LINE L1 7088 7222 -251 5 991 357 304 30 37 chr13 53272549 53272713 -67011599 + RMER15 LTR ERVL 393 555 -20 5 991 319 281 169 57 chr13 53272953 53273059 -67011253 + ID_B1 SINE B4 1 118 -106 5 991 189 0 0 0 chr13 53273059 53273080 -67011232 + (G)n Simple_repeat Simple_repeat 1 21 0 5 991 319 281 169 57 chr13 53273080 53273150 -67011162 + ID_B1 SINE B4 119 196 -28 5 991 968 264 85 38 chr13 53274768 53274991 -67009321 + MTE2b LTR MaLR 22 251 -128 5 991 1860 175 12 56 chr13 53274991 53275420 -67008892 - RMER17C LTR ERVK 0 410 1 5 991 968 264 85 38 chr13 53275420 53275538 -67008774 + MTE2b LTR MaLR 252 379 0 5 991 545 234 271 32 chr13 53276497 53276718 -67007594 + B4 SINE B4 2 275 -17 5 991 253 324 26 71 chr13 53277154 53277267 -67007045 + ID_B1 SINE B4 60 167 -57 5 991 1163 132 20 26 chr13 53277272 53277467 -67006845 - B2_Mm2 SINE B2 0 195 2 5 991 396 319 78 16 chr13 53277517 53277708 -67006604 - B4A SINE B4 -4 288 86 5 991 1099 242 139 18 chr13 53277723 53278055 -67006257 + MTD LTR MaLR 18 389 -30 5 991 375 105 0 0 chr13 53278061 53278118 -67006194 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 991 360 276 165 0 chr13 53278134 53278261 -67006051 - B3 SINE B2 -67 149 2 5 991 1722 151 53 81 chr13 53279361 53279757 -67004555 - RLTR41 LTR ERV1 0 446 62 5 991 449 234 21 0 chr13 53279892 53279986 -67004326 - B1_Mus2 SINE Alu -50 97 2 5 991 25 0 0 0 chr13 53280002 53280027 -67004285 + AT_rich Low_complexity Low_complexity 1 25 0 5 991 407 325 94 30 chr13 53280165 53280272 -67004040 - ID_B1 SINE B4 -1 223 106 5 991 1850 220 36 22 chr13 53280272 53280685 -67003627 + MTD LTR MaLR 1 419 0 5 991 407 325 94 30 chr13 53280685 53280780 -67003532 - ID_B1 SINE B4 -119 105 8 5 991 224 214 204 12 chr13 53281221 53281328 -67002984 + MIRc SINE MIR 39 178 -90 5 991 246 153 51 45 chr13 53281472 53281650 -67002662 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 991 455 249 186 8 chr13 53282045 53282204 -67002108 + MTD LTR MaLR 6 199 -220 5 991 251 172 92 15 chr13 53282259 53282324 -67001988 + Lx9 LINE L1 7386 7455 -189 5 991 278 26 26 0 chr13 53282327 53282366 -67001946 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 991 270 0 0 0 chr13 53282366 53282395 -67001917 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 991 472 212 17 17 chr13 53282964 53283079 -67001233 + PB1D10 SINE Alu 1 115 -2 5 991 637 74 10 23 chr13 53283088 53283195 -67001117 - B1_Mus1 SINE Alu -215 99 1 5 991 204 158 0 0 chr13 53284163 53284201 -67000111 + A-rich Low_complexity Low_complexity 1 38 0 5 991 229 323 62 10 chr13 53284418 53284515 -66999797 - Tigger13a DNA MER2_type -476 295 194 5 991 314 191 73 0 chr13 53284654 53284722 -66999590 + ID4 SINE ID 1 73 -10 5 991 22 0 0 0 chr13 53285070 53285092 -66999220 + GC_rich Low_complexity Low_complexity 1 22 0 5 991 411 304 0 0 chr13 53285141 53285243 -66999069 - ID_B1 SINE B4 -43 181 80 5 991 459 0 0 0 chr13 53285582 53285633 -66998679 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 991 450 49 0 0 chr13 53285633 53285693 -66998619 + (GA)n Simple_repeat Simple_repeat 1 61 0 5 991 1546 32 0 0 chr13 53285737 53285923 -66998389 - B2_Mm1t SINE B2 -5 188 3 5 991 268 202 25 12 chr13 53286119 53286199 -66998113 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 991 454 268 69 44 chr13 53286212 53286372 -66997940 - RSINE1 SINE B4 0 165 2 5 991 667 237 119 16 chr13 53286774 53286967 -66997345 - B3 SINE B2 -3 213 1 5 991 542 302 84 0 chr13 53288015 53288194 -66996118 + B4 SINE B4 97 290 -2 5 991 183 146 0 0 chr13 53288215 53288256 -66996056 + (A)n Simple_repeat Simple_repeat 1 41 0 5 991 1133 48 7 0 chr13 53288262 53288407 -66995905 + B1_Mus2 SINE Alu 2 147 0 5 991 423 0 0 0 chr13 53288838 53288885 -66995427 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 991 259 263 37 120 chr13 53290194 53290302 -66994010 - B4 SINE B4 -28 264 166 5 991 774 237 76 76 chr13 53290384 53290672 -66993640 + B4 SINE B4 3 290 -2 5 991 915 204 0 6 chr13 53291226 53291403 -66992909 + B3 SINE B2 36 211 -5 5 991 206 213 0 0 chr13 53292352 53292399 -66991913 + C-rich Low_complexity Low_complexity 1 47 0 5 991 242 308 0 37 chr13 53292486 53292567 -66991745 - ID4 SINE ID 0 83 6 5 991 286 228 25 42 chr13 53293415 53293534 -66990778 + (TATG)n Simple_repeat Simple_repeat 1 117 0 5 991 203 207 35 0 chr13 53293616 53293674 -66990638 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 991 675 0 0 0 chr13 53295481 53295556 -66988756 + (GAA)n Simple_repeat Simple_repeat 1 75 0 5 991 812 190 169 0 chr13 53295751 53295935 -66988377 + B3 SINE B2 1 215 -1 5 991 456 189 21 10 chr13 53296087 53296183 -66988129 + ID_B1 SINE B4 2 98 -126 5 991 225 281 75 43 chr13 53296751 53296844 -66987468 + B4A SINE B4 1 96 -196 5 991 270 0 0 0 chr13 53296934 53296964 -66987348 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 991 341 131 16 0 chr13 53298706 53298767 -66985545 + (GGAA)n Simple_repeat Simple_repeat 1 62 0 5 991 643 270 0 41 chr13 53299924 53300094 -66984218 + RSINE1 SINE B4 3 165 0 5 991 840 158 0 0 chr13 53301520 53301672 -66982640 + (TG)n Simple_repeat Simple_repeat 2 153 0 5 991 547 226 55 49 chr13 53301674 53301837 -66982475 - RSINE1 SINE B4 0 165 2 5 991 247 146 0 0 chr13 53301860 53301901 -66982411 + L1M2 LINE L1 5387 5427 -746 6 991 444 339 63 39 chr13 53301906 53302191 -66982121 + B4 SINE B4 1 292 0 6 991 377 110 49 33 chr13 53302191 53302313 -66981999 + (CA)n Simple_repeat Simple_repeat 1 124 0 6 991 507 174 40 17 chr13 53302377 53302552 -66981760 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 991 433 267 40 28 chr13 53302561 53302738 -66981574 + L1M2 LINE L1 5434 5612 -679 6 991 234 0 0 0 chr13 53303173 53303199 -66981113 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 6 991 535 265 40 7 chr13 53303312 53303460 -66980852 - B3 SINE B2 -57 159 7 6 991 1011 108 11 17 chr13 53303591 53303770 -66980542 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 6 991 240 35 0 0 chr13 53303770 53303798 -66980514 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 6 991 519 294 66 35 chr13 53303976 53304233 -66980079 - B4A SINE B4 -1 291 27 6 991 413 263 163 7 chr13 53304890 53305043 -66979269 + B4 SINE B4 90 266 -26 6 991 303 28 0 0 chr13 53305050 53305086 -66979226 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 991 386 224 302 19 chr13 53305219 53305378 -66978934 + ID_B1 SINE B4 4 207 -17 6 991 25 0 0 0 chr13 53305994 53306019 -66978293 + AT_rich Low_complexity Low_complexity 1 25 0 6 991 518 286 11 0 chr13 53306065 53306243 -66978069 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 991 599 278 11 6 chr13 53306365 53306539 -66977773 - B3A SINE B2 -16 182 8 6 991 22 56 0 0 chr13 53307419 53307455 -66976857 + GC_rich Low_complexity Low_complexity 1 36 0 6 991 977 239 29 35 chr13 53308729 53309075 -66975237 + RLTR15 LTR ERVK 1 344 -15 6 991 215 100 50 0 chr13 53309265 53309305 -66975007 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 6 991 316 277 88 74 chr13 53309607 53309633 -66974679 + B4 SINE B4 65 88 -204 6 991 216 0 0 0 chr13 53309633 53309657 -66974655 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 6 991 316 277 88 74 chr13 53309657 53309778 -66974534 + B4 SINE B4 89 214 -78 6 991 243 0 0 0 chr13 53309779 53309806 -66974506 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 6 991 396 74 49 0 chr13 53309897 53309978 -66974334 + (CAGAGA)n Simple_repeat Simple_repeat 6 90 0 6 991 256 351 27 2 chr13 53310238 53310377 -66973935 + L1MB8 LINE L1 5327 5467 -707 6 991 848 235 72 152 chr13 53310380 53310724 -66973588 + MTE2a LTR MaLR 11 308 -71 6 991 194 0 39 0 chr13 53310724 53310750 -66973562 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 991 848 235 72 152 chr13 53310750 53310806 -66973506 + MTE2a LTR MaLR 309 378 -1 6 991 218 309 0 36 chr13 53310901 53310985 -66973327 + GA-rich Low_complexity Low_complexity 1 81 0 6 991 549 307 132 13 chr13 53311031 53311417 -66972895 + L1MB8 LINE L1 5673 6104 -74 6 991 316 222 56 14 chr13 53311541 53311645 -66972667 + PB1D10 SINE Alu 4 110 -7 6 991 233 367 0 0 chr13 53311646 53311725 -66972587 + Lx8 LINE L1 7155 7233 -240 6 991 257 342 63 0 chr13 53311725 53311804 -66972508 + RMER15 LTR ERVL 371 454 -121 6 991 423 56 42 0 chr13 53311830 53311901 -66972411 + (CA)n Simple_repeat Simple_repeat 1 74 0 6 991 258 95 0 0 chr13 53312258 53312300 -66972012 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 991 343 351 72 10 chr13 53312408 53312601 -66971711 - ORR1E LTR MaLR -149 210 6 6 991 456 196 72 0 chr13 53312814 53312911 -66971401 - MERVL_2A-int LTR ERVL -2067 3694 3591 6 991 405 294 47 66 chr13 53314414 53314625 -66969687 - B4A SINE B4 -85 207 1 6 991 186 71 0 0 chr13 53314895 53314923 -66969389 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 991 255 257 75 9 chr13 53314932 53315038 -66969274 + L1MA7 LINE L1 6176 6288 -3 6 991 627 257 40 6 chr13 53315191 53315367 -66968945 + B3 SINE B2 2 183 -33 6 991 233 254 15 0 chr13 53315778 53315789 -66968523 - B1F SINE Alu -80 69 3 6 991 258 218 0 0 chr13 53315789 53315844 -66968468 - ID_B1 SINE B4 -86 138 84 6 991 568 219 42 0 chr13 53315975 53316094 -66968218 + B1F SINE Alu 1 124 -25 6 991 393 248 73 0 chr13 53315996 53316105 -66968207 + ID_B1 SINE B4 104 220 -4 6 991 549 241 109 51 chr13 53316550 53316825 -66967487 + B4A SINE B4 2 292 0 6 991 269 279 135 35 chr13 53316909 53317050 -66967262 + B4 SINE B4 10 164 -128 6 991 851 169 0 6 chr13 53317090 53317263 -66967049 + GA-rich Low_complexity Low_complexity 4 175 0 6 991 390 254 0 98 chr13 53317375 53317497 -66966815 - MLT1A1 LTR MaLR -4 404 295 6 991 341 335 75 18 chr13 53317926 53318154 -66966158 + L1MD2 LINE L1 627 867 -5680 6 991 291 54 0 0 chr13 53318304 53318341 -66965971 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 6 991 405 39 0 0 chr13 53318342 53318393 -66965919 + (TTGG)n Simple_repeat Simple_repeat 2 52 0 6 991 942 107 0 0 chr13 53318398 53318529 -66965783 - B1_Mus1 SINE Alu -17 131 1 6 991 341 258 38 61 chr13 53318867 53319061 -66965251 + B2_Mm2 SINE B2 6 198 0 6 991 625 63 0 21 chr13 53319225 53319322 -66964990 + (GGAA)n Simple_repeat Simple_repeat 1 95 0 6 991 1138 43 0 0 chr13 53319383 53319523 -66964789 - B1_Mm SINE Alu -7 140 1 6 991 243 297 0 0 chr13 53319632 53319696 -66964616 + L1MD2 LINE L1 1785 1848 -4792 6 991 237 246 28 42 chr13 53319805 53319859 -66964453 + L1M5 LINE L1 5705 5759 -405 6 991 1202 234 68 38 chr13 53319859 53320227 -66964085 - MTEb LTR MaLR 0 379 1 6 991 237 246 28 42 chr13 53320227 53320244 -66964068 + L1M5 LINE L1 5760 5775 -389 6 991 752 164 7 0 chr13 53321399 53321539 -66962773 - ORR1B1 LTR MaLR -253 141 1 6 991 366 188 24 186 chr13 53321539 53321576 -66962736 + B4A SINE B4 183 214 -78 6 991 1041 167 86 0 chr13 53321576 53321774 -66962538 + B3 SINE B2 2 216 0 6 991 366 188 24 186 chr13 53321774 53321858 -66962454 + B4A SINE B4 215 284 -8 6 991 189 74 0 0 chr13 53321888 53321915 -66962397 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 991 644 0 13 0 chr13 53322370 53322446 -66961866 + (TC)n Simple_repeat Simple_repeat 1 77 0 6 991 2333 34 46 19 chr13 53323320 53323645 -66960667 + MTB_Mm LTR MaLR 1 334 -73 6 991 3363 23 0 2 chr13 53323646 53324043 -66960269 + MTA_Mm LTR MaLR 1 396 0 6 991 1314 266 172 34 chr13 53324067 53324648 -66959664 + Tigger1 DNA MER2_type 777 1437 -981 6 991 1078 256 47 17 chr13 53324649 53324947 -66959365 + MTEa LTR MaLR 1 307 -72 6 991 1671 286 117 74 chr13 53324965 53325363 -66958949 + Tigger1 DNA MER2_type 1446 1916 -502 6 991 491 293 165 31 chr13 53325363 53325436 -66958876 + B4 SINE B4 1 95 -197 6 991 654 184 86 22 chr13 53325436 53325561 -66958751 + B1_Mur2 SINE Alu 1 136 -13 6 991 198 0 0 0 chr13 53325561 53325583 -66958729 + (TAA)n Simple_repeat Simple_repeat 1 22 0 6 991 654 184 86 22 chr13 53325583 53325596 -66958716 + B1_Mur2 SINE Alu 137 148 -1 6 991 491 293 165 31 chr13 53325596 53325776 -66958536 + B4 SINE B4 96 288 -4 6 991 1671 286 117 74 chr13 53325776 53326309 -66958003 + Tigger1 DNA MER2_type 1917 2417 -1 6 991 478 237 93 155 chr13 53327155 53327465 -66956847 + B4A SINE B4 2 292 0 6 991 318 107 0 0 chr13 53327771 53327827 -66956485 + (ACTG)n Simple_repeat Simple_repeat 2 57 0 6 991 324 0 0 0 chr13 53328443 53328479 -66955833 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 991 338 214 2 0 chr13 53328541 53328614 -66955698 - B3A SINE B2 -107 88 15 6 991 267 182 62 49 chr13 53328650 53328731 -66955581 - ID4 SINE ID -1 82 1 6 991 237 132 0 0 chr13 53330110 53330148 -66954164 + (A)n Simple_repeat Simple_repeat 1 38 0 6 991 254 50 0 24 chr13 53330872 53330913 -66953399 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 6 991 606 280 65 5 chr13 53332460 53332661 -66951651 + ID_B1 SINE B4 9 221 -3 6 991 303 200 20 82 chr13 53334016 53334027 -66950285 + MT2B LTR ERVL 173 264 -337 6 991 701 121 67 33 chr13 53334027 53334114 -66950198 + B1_Mur3 SINE Alu 20 114 -35 6 991 2577 94 57 45 chr13 53334114 53334515 -66949797 + MTB_Mm LTR MaLR 2 407 0 6 991 701 121 67 33 chr13 53334515 53334547 -66949765 + B1_Mur3 SINE Alu 115 143 -6 6 991 381 288 71 16 chr13 53334721 53334848 -66949464 - RSINE1 SINE B4 -28 137 4 6 991 788 192 18 30 chr13 53335033 53335234 -66949078 - B3 SINE B2 0 195 2 6 991 284 0 28 0 chr13 53335369 53335405 -66948907 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 6 991 537 88 415 38 chr13 53335406 53335512 -66948800 - B1_Mus1 SINE Alu -2 146 1 6 991 266 276 94 126 chr13 53335958 53336167 -66948145 + B4A SINE B4 71 276 -16 6 991 2965 56 40 27 chr13 53336181 53336583 -66947729 + MTB_Mm LTR MaLR 1 407 0 6 991 265 185 15 44 chr13 53336587 53336655 -66947657 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 991 205 352 135 14 chr13 53337176 53337317 -66946995 + MIR SINE MIR 88 245 -17 6 991 466 241 145 12 chr13 53337903 53338075 -66946237 - RMER15 LTR ERVL -88 487 293 6 991 394 292 49 49 chr13 53338083 53338245 -66946067 - RMER15 LTR ERVL -413 162 1 6 991 745 278 106 66 chr13 53338268 53338452 -66945860 + B4 SINE B4 9 214 -78 6 991 315 71 0 0 chr13 53338452 53338494 -66945818 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 6 991 745 278 106 66 chr13 53338494 53338582 -66945730 + B4 SINE B4 215 292 0 6 991 234 91 0 0 chr13 53339324 53339357 -66944955 + (T)n Simple_repeat Simple_repeat 1 33 0 6 991 595 133 28 37 chr13 53341410 53341519 -66942793 - RLTR13C2 LTR ERVK 0 808 701 6 991 244 321 30 6 chr13 53342119 53342288 -66942024 + (CA)n Simple_repeat Simple_repeat 2 174 0 6 991 661 241 226 5 chr13 53343091 53343308 -66941004 + B4A SINE B4 1 265 -27 6 991 423 0 0 0 chr13 53343311 53343358 -66940954 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 991 341 200 101 70 chr13 53343390 53343500 -66940812 + B1F SINE Alu 32 135 -14 6 991 438 220 55 9 chr13 53343708 53343818 -66940494 + B1_Mus2 SINE Alu 32 146 -1 6 991 859 229 198 4 chr13 53344179 53344442 -66939870 + MTEb LTR MaLR 1 314 -65 6 991 498 327 52 57 chr13 53344485 53344715 -66939597 - MER2 DNA MER2_type -59 286 58 6 991 936 221 34 55 chr13 53345218 53345547 -66938765 + ORR1D2 LTR MaLR 1 415 -4 6 991 979 255 103 98 chr13 53345691 53345807 -66938505 + MTD LTR MaLR 17 105 -314 6 991 1219 68 0 0 chr13 53345807 53345954 -66938358 - B1_Mus1 SINE Alu 0 148 2 6 991 979 255 103 98 chr13 53345954 53346224 -66938088 + MTD LTR MaLR 106 405 -14 6 992 264 317 0 24 chr13 53346490 53346574 -66937738 + ID4 SINE ID 2 83 0 7 992 210 309 0 165 chr13 53346636 53346733 -66937579 + B1F2 SINE Alu 1 81 -68 7 992 3102 55 47 0 chr13 53346785 53347167 -66937145 + MTB LTR MaLR 1 400 0 7 992 375 23 0 0 chr13 53347407 53347451 -66936861 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 992 22 56 0 0 chr13 53347456 53347492 -66936820 + AT_rich Low_complexity Low_complexity 1 36 0 7 992 577 235 96 0 chr13 53347512 53347627 -66936685 + B1_Mur4 SINE Alu 10 135 -15 7 992 345 274 47 24 chr13 53348299 53348426 -66935886 + GA-rich Low_complexity Low_complexity 4 133 0 7 992 329 62 21 0 chr13 53348427 53348475 -66935837 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 7 992 24 0 0 0 chr13 53348696 53348720 -66935592 + AT_rich Low_complexity Low_complexity 1 24 0 7 992 344 240 295 136 chr13 53349036 53349287 -66935025 - B4 SINE B4 0 292 2 7 992 1207 56 0 0 chr13 53350276 53350419 -66933893 + B1_Mus2 SINE Alu 5 147 0 7 992 513 0 0 0 chr13 53351400 53351457 -66932855 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 992 230 297 44 26 chr13 53351744 53351858 -66932454 - L1MB3 LINE L1 -63 6120 6005 7 992 2286 114 9 15 chr13 53352254 53352583 -66931729 - ORR1A2 LTR MaLR 0 327 1 7 992 249 206 89 89 chr13 53353276 53353377 -66930935 - MLT1B LTR MaLR -215 175 75 7 992 728 241 10 52 chr13 53353433 53353626 -66930686 + B3A SINE B2 3 187 -11 7 992 191 204 73 18 chr13 53354014 53354069 -66930243 - MIR SINE MIR -35 227 170 7 992 974 265 58 27 chr13 53354947 53355207 -66929105 + B4 SINE B4 2 269 -23 7 992 369 43 0 0 chr13 53355207 53355254 -66929058 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 992 360 0 0 0 chr13 53355254 53355293 -66929019 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 992 552 259 21 43 chr13 53356123 53356264 -66928048 + B4A SINE B4 2 139 -153 7 992 482 47 47 0 chr13 53356286 53356372 -66927940 + (CA)n Simple_repeat Simple_repeat 2 91 0 7 992 756 188 0 29 chr13 53356373 53356510 -66927802 - ORR1E LTR MaLR -219 140 8 7 992 504 267 74 108 chr13 53357066 53357168 -66927144 + ID_B1 SINE B4 1 223 -1 7 992 602 193 8 78 chr13 53357168 53357297 -66927015 + B1F2 SINE Alu 30 149 0 7 992 405 0 0 0 chr13 53357348 53357393 -66926919 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 992 300 243 0 0 chr13 53359379 53359490 -66924822 + (CA)n Simple_repeat Simple_repeat 1 111 0 7 992 578 198 6 0 chr13 53359506 53359663 -66924649 + (CA)n Simple_repeat Simple_repeat 1 158 0 7 992 418 240 4 7 chr13 53359674 53359950 -66924362 + (CA)n Simple_repeat Simple_repeat 1 274 0 7 992 376 277 78 37 chr13 53360069 53360260 -66924052 + L1MB8 LINE L1 5558 5756 -422 7 992 1690 171 44 57 chr13 53360403 53360770 -66923542 + ORR1C2 LTR MaLR 23 384 0 7 992 685 304 96 3 chr13 53360770 53361123 -66923189 + L1MC3 LINE L1 7334 7719 -66 7 992 464 0 18 0 chr13 53361271 53361327 -66922985 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 992 723 338 21 57 chr13 53361330 53361612 -66922700 - B4A SINE B4 -14 278 7 7 992 628 302 16 4 chr13 53361613 53361795 -66922517 - B4 SINE B4 -73 219 36 7 992 550 298 80 28 chr13 53361878 53362165 -66922147 + L1MB8 LINE L1 5816 6117 -61 7 992 198 0 0 0 chr13 53362531 53362553 -66921759 + (CTGGGG)n Simple_repeat Simple_repeat 5 26 0 7 992 924 108 281 23 chr13 53362686 53362857 -66921455 + B3 SINE B2 2 216 0 7 992 503 188 0 0 chr13 53362931 53363011 -66921301 + B1_Mus1 SINE Alu 1 80 -68 7 992 685 232 7 27 chr13 53363024 53363170 -66921142 + B1_Mur1 SINE Alu 1 143 -6 7 992 386 306 63 53 chr13 53363709 53363916 -66920396 + MER3 DNA MER1_type 1 209 0 7 992 312 27 0 0 chr13 53364364 53364401 -66919911 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 992 681 271 46 46 chr13 53364425 53364622 -66919690 - B4 SINE B4 -16 276 80 7 992 213 119 0 0 chr13 53365022 53365064 -66919248 + (CCCTAA)n Simple_repeat Simple_repeat 2 43 0 7 992 431 63 16 0 chr13 53365082 53365145 -66919167 + (CCCCAG)n Simple_repeat Simple_repeat 6 69 0 7 992 1089 86 6 17 chr13 53365187 53365365 -66918947 + (CCCTAA)n Simple_repeat Simple_repeat 3 178 0 7 992 926 202 59 29 chr13 53365550 53365754 -66918558 + B3 SINE B2 2 211 -5 7 992 564 173 58 29 chr13 53365986 53366123 -66918189 - Tigger7 DNA MER2_type -29 2462 2322 7 992 350 288 45 171 chr13 53366129 53366305 -66918007 + RSINE1 SINE B4 8 161 -4 7 992 1163 218 46 8 chr13 53366439 53366702 -66917610 - RMER15 LTR ERVL -3 572 300 7 992 434 181 76 222 chr13 53366730 53366901 -66917411 - RMER15 LTR ERVL -427 148 3 7 992 263 372 42 28 chr13 53366929 53367095 -66917217 - MER44D DNA MER2_type -2322 169 1 7 992 678 190 256 30 chr13 53368413 53368581 -66915731 + B3 SINE B2 1 206 -10 7 992 1192 68 7 0 chr13 53368591 53368737 -66915575 + B1_Mus1 SINE Alu 2 148 0 7 992 391 202 139 58 chr13 53369088 53369225 -66915087 - RMER15 LTR ERVL -425 150 3 7 992 367 258 34 0 chr13 53369506 53369595 -66914717 + MER46C DNA MER2_type 236 327 -11 7 992 345 24 0 0 chr13 53369914 53369956 -66914356 + (GTTTG)n Simple_repeat Simple_repeat 5 46 0 7 992 295 297 20 10 chr13 53369957 53370059 -66914253 - ID_B1 SINE B4 -11 213 111 7 992 624 272 15 39 chr13 53370165 53370368 -66913944 + L1MB5 LINE L1 5861 6058 -116 7 992 1119 192 29 5 chr13 53370473 53370677 -66913635 + B3 SINE B2 2 210 -6 7 992 681 13 0 0 chr13 53370678 53370756 -66913556 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 7 992 666 0 0 0 chr13 53371051 53371125 -66913187 + (GA)n Simple_repeat Simple_repeat 1 74 0 7 992 438 0 48 0 chr13 53371453 53371515 -66912797 + (CAA)n Simple_repeat Simple_repeat 2 66 0 7 992 354 107 0 0 chr13 53372537 53372593 -66911719 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 992 354 295 246 56 chr13 53372718 53373014 -66911298 + MLT1A LTR MaLR 7 356 -52 7 992 817 141 27 34 chr13 53373087 53373234 -66911078 + B1_Mus1 SINE Alu 2 147 -1 7 992 664 260 50 40 chr13 53373740 53373940 -66910372 + B4A SINE B4 24 225 -67 7 992 253 320 92 6 chr13 53375185 53375358 -66908954 - L1MC4 LINE L1 -1053 6989 6802 7 992 306 0 0 0 chr13 53375726 53375760 -66908552 + (TC)n Simple_repeat Simple_repeat 2 35 0 7 992 351 0 0 0 chr13 53375760 53375798 -66908514 + (TA)n Simple_repeat Simple_repeat 2 40 0 7 992 273 57 0 0 chr13 53375910 53375945 -66908367 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 7 992 684 203 0 0 chr13 53375947 53376070 -66908242 - B1_Mur2 SINE Alu -12 137 15 7 992 1000 115 0 0 chr13 53376157 53376296 -66908016 + B2_Mm2 SINE B2 1 139 -56 7 992 450 0 0 0 chr13 53376307 53376357 -66907955 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 992 284 255 198 25 chr13 53376400 53376597 -66907715 + L1M4 LINE L1 4048 4278 -1868 7 992 339 332 97 19 chr13 53376649 53376673 -66907639 + L1M2 LINE L1 4384 4406 -1737 7 992 315 0 0 0 chr13 53376673 53376708 -66907604 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 992 346 322 110 11 chr13 53376708 53376890 -66907422 + L1M4 LINE L1 4410 4609 -1537 7 992 434 288 15 8 chr13 53376893 53377026 -66907286 + MER3 DNA MER1_type 75 208 -1 7 992 214 250 0 35 chr13 53378766 53378824 -66905488 + ID4_ SINE ID 15 70 -13 7 992 432 0 0 0 chr13 53379460 53379508 -66904804 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 992 21 0 0 0 chr13 53381075 53381096 -66903216 + GC_rich Low_complexity Low_complexity 1 21 0 7 992 250 286 95 0 chr13 53382259 53382322 -66901990 - ID4_ SINE ID -12 71 3 7 992 967 226 14 19 chr13 53382348 53382564 -66901748 - B3 SINE B2 -1 215 1 7 992 662 281 117 0 chr13 53382648 53382844 -66901468 - ID_B1 SINE B4 -5 219 1 7 992 627 239 42 0 chr13 53382907 53383049 -66901263 + B1_Mur2 SINE Alu 1 148 -1 7 992 1990 143 120 0 chr13 53383339 53383688 -66900624 - ORR1B1 LTR MaLR -3 391 1 7 992 599 253 57 31 chr13 53384232 53384391 -66899921 + RSINE1 SINE B4 3 165 0 7 992 1286 95 26 16 chr13 53384698 53384890 -66899422 - B2_Mm2 SINE B2 0 195 2 7 992 1202 185 19 0 chr13 53384956 53385167 -66899145 + B3 SINE B2 2 216 0 7 992 402 324 139 14 chr13 53385347 53385563 -66898749 - MER21B LTR ERV1 -128 735 493 7 992 234 325 131 74 chr13 53385574 53385750 -66898562 - MER21B LTR ERV1 -438 425 240 7 992 2697 137 54 44 chr13 53386098 53386580 -66897732 + RLTR31B_Mm LTR ERVK 1 487 -70 7 992 671 269 52 75 chr13 53387054 53387360 -66896952 + MLT1B LTR MaLR 78 376 -14 7 992 513 222 25 25 chr13 53389345 53389357 -66894955 - B1_Mur4 SINE Alu -20 130 119 7 992 180 0 0 0 chr13 53389357 53389377 -66894935 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 992 513 222 25 25 chr13 53389377 53389484 -66894828 - B1_Mur4 SINE Alu -32 118 13 7 992 2605 67 9 6 chr13 53389496 53389841 -66894471 - L1Md_F2 LINE L1 -2 6580 6235 7 992 1075 240 85 46 chr13 53389860 53390188 -66894124 + MTE2a LTR MaLR 39 379 0 7 992 575 241 7 28 chr13 53390618 53390759 -66893553 - ID_B1 SINE B4 -1 223 86 7 992 807 184 7 0 chr13 53390777 53390918 -66893394 - B1_Mus2 SINE Alu 0 147 6 7 992 641 286 26 61 chr13 53390918 53391008 -66893304 - ID_B1 SINE B4 0 224 2 7 992 270 231 0 0 chr13 53391022 53391074 -66893238 - ID_B1 SINE B4 0 224 173 7 992 315 276 51 0 chr13 53391092 53391178 -66893134 - ID2 SINE ID -61 91 2 7 992 387 176 1 60 chr13 53391287 53391380 -66892932 + PB1D10 SINE Alu 23 112 -36 7 992 916 241 40 44 chr13 53391460 53391708 -66892604 - Lx8 LINE L1 -412 7061 6815 7 992 1610 246 65 122 chr13 53391792 53392532 -66891780 - Lx9 LINE L1 -2 7642 6945 7 992 561 178 20 0 chr13 53392513 53392614 -66891698 - L1_Mur2 LINE L1 -6596 116 14 7 992 588 259 86 6 chr13 53392617 53392780 -66891532 - B4 SINE B4 -113 179 4 8 992 213 326 0 21 chr13 53392793 53392890 -66891422 - L2 LINE L2 -1613 1806 1712 8 992 183 214 33 82 chr13 53393270 53393331 -66890981 + L2b LINE L2 3267 3324 -51 8 992 1939 106 28 150 chr13 53393573 53394040 -66890272 + RMER17C LTR ERVK 1 410 0 8 992 2931 106 32 2 chr13 53394575 53394982 -66889330 - MTC LTR MaLR 0 421 3 8 992 37 23 0 0 chr13 53395277 53395321 -66888991 + AT_rich Low_complexity Low_complexity 1 44 0 8 992 301 208 125 0 chr13 53395399 53395471 -66888841 + PB1D9 SINE Alu 2 82 -38 8 992 1588 86 0 0 chr13 53395576 53395786 -66888526 + ORR1A2 LTR MaLR 2 211 -116 8 992 832 72 27 0 chr13 53396090 53396201 -66888111 + ORR1A2 LTR MaLR 205 318 -8 8 992 883 93 0 44 chr13 53396392 53396527 -66887785 - B1_Mus1 SINE Alu -5 143 15 8 992 665 229 131 48 chr13 53396527 53396594 -66887718 - ID_B1 SINE B4 -1 219 1 8 992 442 239 25 76 chr13 53396702 53396723 -66887589 - PB1D10 SINE Alu 0 117 102 8 992 714 269 5 53 chr13 53396723 53396931 -66887381 - B3A SINE B2 0 198 1 8 992 442 239 25 76 chr13 53396931 53397027 -66887285 - PB1D10 SINE Alu -16 101 6 8 992 497 250 96 113 chr13 53397466 53397768 -66886544 - ORR1E LTR MaLR -11 348 52 8 992 477 0 0 0 chr13 53397908 53397961 -66886351 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 8 992 303 325 6 19 chr13 53398049 53398206 -66886106 + L1M5 LINE L1 2445 2599 -3547 8 992 391 266 53 0 chr13 53398272 53398385 -66885927 - Charlie10a DNA MER1_type -75 205 87 8 992 334 377 24 30 chr13 53398704 53398868 -66885444 + RSINE1 SINE B4 3 165 0 8 992 1082 214 5 0 chr13 53398896 53399097 -66885215 + B3 SINE B2 1 202 -14 8 992 221 0 35 0 chr13 53399097 53399126 -66885186 + (TAGA)n Simple_repeat Simple_repeat 3 32 0 8 992 1529 43 0 26 chr13 53399130 53399321 -66884991 - B2_Mm1t SINE B2 -6 187 2 8 992 21 57 0 0 chr13 53399594 53399629 -66884683 + AT_rich Low_complexity Low_complexity 1 35 0 8 992 317 220 115 34 chr13 53400340 53400427 -66883885 - PB1D10 SINE Alu -7 120 33 8 992 230 319 43 0 chr13 53400555 53400624 -66883688 + tRNA-Ala-GCY_ tRNA tRNA 3 74 -1 8 992 853 142 177 12 chr13 53400740 53400904 -66883408 + B2_Mm2 SINE B2 1 191 -4 8 992 332 210 49 12 chr13 53401463 53401545 -66882767 + ID_B1 SINE B4 77 161 -63 8 992 289 305 21 10 chr13 53401472 53401568 -66882744 + PB1D10 SINE Alu 8 104 -13 8 992 324 0 0 0 chr13 53401570 53401606 -66882706 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 8 992 925 87 189 12 chr13 53401733 53401897 -66882415 + B2_Mm2 SINE B2 2 194 -1 8 992 708 98 0 0 chr13 53401899 53402001 -66882311 + (GAGAA)n Simple_repeat Simple_repeat 4 105 0 8 992 939 223 24 19 chr13 53402309 53402515 -66881797 - B3 SINE B2 0 216 10 8 992 600 300 5 3 chr13 53403782 53403946 -66880366 + B3A SINE B2 36 202 -14 8 992 206 156 0 22 chr13 53403950 53403996 -66880316 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 992 227 315 76 0 chr13 53405769 53405861 -66878451 + RMER30 DNA MER1_type 82 180 -22 8 992 225 0 0 0 chr13 53406081 53406106 -66878206 + (CTG)n Simple_repeat Simple_repeat 2 26 0 8 992 563 144 33 33 chr13 53406108 53406288 -66878024 + CT-rich Low_complexity Low_complexity 1 180 0 8 992 221 163 20 0 chr13 53406307 53406356 -66877956 + CT-rich Low_complexity Low_complexity 1 50 0 8 992 350 132 19 0 chr13 53406360 53406413 -66877899 - B1_Mur4 SINE Alu -65 85 32 8 992 23 0 0 0 chr13 53406416 53406439 -66877873 + AT_rich Low_complexity Low_complexity 1 23 0 8 992 968 124 21 0 chr13 53406441 53406586 -66877726 - B1_Mur4 SINE Alu -1 149 2 8 992 213 287 64 82 chr13 53406702 53406812 -66877500 + ID_B1 SINE B4 50 157 -67 8 992 445 226 41 65 chr13 53406786 53406909 -66877403 + B4A SINE B4 173 292 0 8 992 291 275 242 62 chr13 53406931 53406948 -66877364 + ID_B1 SINE B4 72 222 -2 8 992 414 292 9 45 chr13 53406948 53407059 -66877253 + PB1D10 SINE Alu 10 116 -1 8 992 246 274 28 64 chr13 53407038 53407147 -66877165 + B4 SINE B4 63 167 -125 8 992 497 233 25 25 chr13 53407071 53407190 -66877122 + B1F2 SINE Alu 10 128 -21 8 992 352 233 144 0 chr13 53407331 53407421 -66876891 - B3A SINE B2 -94 104 2 8 992 336 257 0 26 chr13 53407457 53407533 -66876779 - MER34A1 LTR ERV1 -484 103 30 8 992 236 292 104 37 chr13 53407811 53407946 -66876366 + ID_B1 SINE B4 7 150 -74 8 992 558 242 23 23 chr13 53407879 53408010 -66876302 - ID_B1 SINE B4 -13 211 81 8 992 541 257 9 0 chr13 53408989 53409098 -66875214 + B4 SINE B4 171 280 -12 8 992 306 0 0 0 chr13 53409124 53409158 -66875154 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 992 291 320 128 32 chr13 53409166 53409479 -66874833 - L1MC4a LINE L1 -24 7858 7516 8 992 1704 151 60 92 chr13 53409768 53410132 -66874180 - ORR1B1 LTR MaLR 0 394 12 8 992 498 253 42 131 chr13 53410709 53410730 -66873582 - B2_Mm2 SINE B2 0 195 182 8 992 883 146 27 14 chr13 53410730 53410876 -66873436 + B1_Mur4 SINE Alu 3 150 0 8 992 811 233 48 14 chr13 53410876 53411068 -66873244 - B3 SINE B2 -22 194 1 8 992 333 71 0 0 chr13 53411095 53411137 -66873175 + RSINE1 SINE B4 79 120 -45 8 992 1153 137 11 0 chr13 53411210 53411385 -66872927 + B2_Mm1t SINE B2 3 179 -14 8 992 480 80 286 103 chr13 53411433 53411559 -66872753 + B2_Mm2 SINE B2 47 195 0 8 992 1442 194 98 23 chr13 53412349 53412735 -66871577 - MTD LTR MaLR 0 419 5 8 992 288 286 26 0 chr13 53412807 53412884 -66871428 - ID4 SINE ID 0 83 5 8 992 480 298 244 16 chr13 53413027 53413269 -66871043 + MLT2B3 LTR ERVL 28 324 -230 8 992 318 257 27 0 chr13 53413623 53413697 -66870615 + ID4_ SINE ID 2 77 -6 8 992 337 266 0 12 chr13 53413768 53413848 -66870464 - ID4_ SINE ID -3 80 2 8 992 26 30 0 0 chr13 53413857 53413890 -66870422 + AT_rich Low_complexity Low_complexity 1 33 0 8 992 271 297 103 63 chr13 53413903 53414029 -66870283 - B3A SINE B2 0 198 68 8 992 55 62 0 0 chr13 53414075 53414172 -66870140 + AT_rich Low_complexity Low_complexity 1 97 0 8 992 542 208 390 0 chr13 53414172 53414326 -66869986 - B3 SINE B2 -2 214 1 8 992 2275 142 19 63 chr13 53415132 53415544 -66868768 + ORR1B1 LTR MaLR 1 394 0 8 992 1426 79 11 0 chr13 53416056 53416245 -66868067 - B2_Mm1t SINE B2 -1 192 2 8 992 1356 77 16 5 chr13 53416953 53417137 -66867175 + B2_Mm1a SINE B2 2 187 -6 8 992 577 215 96 18 chr13 53417557 53417723 -66866589 - MTD LTR MaLR 0 419 241 8 992 975 179 418 0 chr13 53417997 53418265 -66866047 + RLTR14 LTR ERV1 3 382 0 8 992 516 292 70 109 chr13 53418475 53418782 -66865530 - MTD LTR MaLR -121 286 4 8 992 229 264 48 164 chr13 53418784 53418888 -66865424 + PB1D7 SINE Alu 29 120 0 8 992 573 299 83 96 chr13 53419351 53420333 -66863979 + L1MDa LINE L1 831 1810 -4823 8 992 2181 133 88 3 chr13 53420333 53420696 -66863616 + ORR1B1 LTR MaLR 1 394 0 8 992 573 313 92 46 chr13 53420696 53420736 -66863576 + L1MDa LINE L1 1811 1851 -4782 8 992 435 38 0 0 chr13 53420749 53420802 -66863510 + (GGA)n Simple_repeat Simple_repeat 3 55 0 8 992 4516 132 20 23 chr13 53420881 53421417 -66862895 - RMER6A LTR ERVK -14 742 215 8 992 1418 85 21 0 chr13 53421417 53421606 -66862706 - B2_Mm1t SINE B2 0 193 1 8 992 4516 132 20 23 chr13 53421606 53421813 -66862499 - RMER6A LTR ERVK -542 214 1 8 992 469 283 87 27 chr13 53421813 53421960 -66862352 + RSINE1 SINE B4 9 164 -1 8 992 549 324 48 62 chr13 53422008 53422281 -66862031 + B4 SINE B4 5 273 -19 8 992 970 193 0 6 chr13 53422993 53423165 -66861147 - B3 SINE B2 -19 197 27 8 992 21 0 0 0 chr13 53423650 53423671 -66860641 + AT_rich Low_complexity Low_complexity 1 21 0 8 992 517 320 61 18 chr13 53423671 53423951 -66860361 - B4 SINE B4 0 292 1 8 992 2389 54 0 0 chr13 53424328 53424622 -66859690 + L1Md_A LINE L1 6289 6582 0 8 992 342 0 0 0 chr13 53424924 53424962 -66859350 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 992 308 43 0 21 chr13 53425296 53425343 -66858969 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 8 992 1323 13 19 0 chr13 53425343 53425499 -66858813 - B2_Mm1a SINE B2 -33 160 2 8 992 345 253 108 131 chr13 53425620 53425879 -66858433 + MTEa LTR MaLR 1 320 -59 8 992 1096 90 7 0 chr13 53425879 53426024 -66858288 - B1_Mm SINE Alu 0 147 2 8 992 345 219 16 176 chr13 53426024 53426085 -66858227 + MTEa LTR MaLR 321 374 -5 8 992 294 270 0 20 chr13 53426282 53426384 -66857928 + T-rich Low_complexity Low_complexity 4 103 0 8 992 1432 60 49 0 chr13 53426631 53426815 -66857497 - B2_Mm1t SINE B2 0 193 1 8 992 258 273 32 40 chr13 53426967 53427093 -66857219 - HAL1 LINE L1 -861 1646 1522 8 992 262 339 89 0 chr13 53427310 53427434 -66856878 + Lx8 LINE L1 7056 7190 -283 8 992 318 349 39 8 chr13 53427464 53427591 -66856721 + RMER15 LTR ERVL 426 556 -19 8 992 264 250 94 99 chr13 53427722 53427826 -66856486 - B4 SINE B4 -101 191 24 8 992 357 240 13 0 chr13 53427826 53427901 -66856411 - BC1_Mm scRNA scRNA -70 82 7 8 992 264 250 94 99 chr13 53427901 53427913 -66856399 - B4 SINE B4 -101 23 2 8 992 1125 189 121 23 chr13 53430984 53431249 -66853063 + ORR1D1 LTR MaLR 3 293 -81 8 992 255 79 0 0 chr13 53431800 53431838 -66852474 + (TTC)n Simple_repeat Simple_repeat 2 39 0 8 992 296 24 24 0 chr13 53431848 53431889 -66852423 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 8 992 1227 47 0 7 chr13 53431889 53432027 -66852285 - B1_Mus1 SINE Alu -10 138 1 8 992 485 283 22 7 chr13 53432534 53432673 -66851639 + B1F SINE Alu 1 141 -8 8 992 279 79 0 0 chr13 53435038 53435076 -66849236 + (TCC)n Simple_repeat Simple_repeat 2 39 0 8 992 686 285 112 9 chr13 53436145 53436368 -66847944 + B4 SINE B4 41 286 -6 9 992 459 0 0 0 chr13 53436605 53436656 -66847656 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 992 552 264 0 20 chr13 53438073 53438220 -66846092 - RSINE1 SINE B4 -20 145 2 9 992 1188 118 37 21 chr13 53438806 53438997 -66845315 + B2_Mm2 SINE B2 1 194 -1 9 992 345 24 0 0 chr13 53439703 53439745 -66844567 + (CA)n Simple_repeat Simple_repeat 1 42 0 9 992 276 235 0 0 chr13 53439873 53439924 -66844388 - B1F1 SINE Alu -98 51 1 9 992 23 0 0 0 chr13 53440253 53440276 -66844036 + AT_rich Low_complexity Low_complexity 1 23 0 9 992 957 149 7 0 chr13 53440956 53441104 -66843208 - B1_Mur4 SINE Alu 0 150 2 9 992 355 93 0 36 chr13 53441266 53441322 -66842990 - B1_Mur3 SINE Alu -13 136 83 9 992 384 205 298 18 chr13 53442216 53442330 -66841982 + RSINE1 SINE B4 4 149 -16 9 992 390 283 127 25 chr13 53442676 53442959 -66841353 + L1ME1 LINE L1 3915 4226 -1920 9 992 455 220 0 99 chr13 53442960 53443024 -66841288 - ID_B1 SINE B4 -1 223 169 9 992 1763 167 133 61 chr13 53443024 53443514 -66840798 + RLTR24 LTR ERV1 5 529 0 9 992 455 220 0 99 chr13 53443514 53443550 -66840762 - ID_B1 SINE B4 -56 168 133 9 992 183 80 0 0 chr13 53443579 53443604 -66840708 + (CAGT)n Simple_repeat Simple_repeat 4 28 0 9 992 621 0 0 0 chr13 53443604 53443672 -66840640 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 9 992 265 250 33 0 chr13 53443720 53443812 -66840500 + L1ME1 LINE L1 4299 4393 -1753 9 992 204 40 0 0 chr13 53444388 53444413 -66839899 + (CCAA)n Simple_repeat Simple_repeat 3 27 0 9 992 482 237 33 50 chr13 53444500 53444620 -66839692 - PB1D9 SINE Alu 0 120 3 9 992 432 247 114 24 chr13 53444643 53444893 -66839419 + L1ME1 LINE L1 5173 5447 -731 9 992 204 97 0 0 chr13 53445332 53445363 -66838949 + (CTGTG)n Simple_repeat Simple_repeat 5 35 0 9 992 479 273 143 64 chr13 53445456 53445722 -66838590 + L1ME1 LINE L1 5892 6178 -1 9 992 2157 248 32 18 chr13 53445728 53446592 -66837720 + Lx5 LINE L1 6240 7021 -29 9 992 25 31 0 0 chr13 53447139 53447171 -66837141 + AT_rich Low_complexity Low_complexity 1 32 0 9 992 216 244 0 0 chr13 53447500 53447545 -66836767 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 992 26 0 0 0 chr13 53448399 53448425 -66835887 + AT_rich Low_complexity Low_complexity 1 26 0 9 992 1373 81 11 5 chr13 53450019 53450206 -66834106 + B2_Mm2 SINE B2 1 188 -7 9 992 263 309 29 0 chr13 53450636 53450704 -66833608 + RMER30 DNA MER1_type 27 96 -106 9 992 377 253 317 39 chr13 53450899 53451291 -66833021 + L1MDa LINE L1 1186 1685 -4948 9 992 680 224 31 81 chr13 53452087 53452310 -66832002 + B3 SINE B2 2 213 -3 9 992 306 260 14 14 chr13 53452997 53453071 -66831241 + B4 SINE B4 10 83 -209 9 992 683 271 43 0 chr13 53453517 53453724 -66830588 - B3 SINE B2 0 216 1 9 992 420 326 66 7 chr13 53454406 53454542 -66829770 - RSINE1 SINE B4 -6 159 16 9 992 3089 202 110 27 chr13 53454983 53455685 -66828627 + Lx6 LINE L1 5930 6689 -771 9 992 488 214 19 37 chr13 53455683 53455764 -66828548 + Lx7 LINE L1 6794 6871 -825 9 992 1002 218 217 130 chr13 53455764 53456317 -66827995 + MT2B LTR ERVL 1 601 0 9 992 488 214 19 37 chr13 53456317 53456342 -66827970 + Lx7 LINE L1 6872 6898 -798 9 992 956 143 220 19 chr13 53456345 53456559 -66827753 + Lx7 LINE L1 7440 7696 0 9 992 245 352 54 20 chr13 53458523 53458671 -66825641 + MIR SINE MIR 96 248 -14 9 992 620 191 103 0 chr13 53458964 53459090 -66825222 - B1_Mus1 SINE Alu -9 139 1 9 992 967 61 46 0 chr13 53459091 53459222 -66825090 + B1_Mm SINE Alu 11 147 0 9 992 208 119 0 45 chr13 53459223 53459267 -66825045 + A-rich Low_complexity Low_complexity 1 42 0 9 992 594 284 12 31 chr13 53459300 53459460 -66824852 + RSINE1 SINE B4 5 161 -4 9 992 412 150 138 0 chr13 53459511 53459591 -66824721 + PB1 SINE Alu 34 124 -3 9 992 336 251 72 161 chr13 53460952 53461175 -66823137 + Lx7 LINE L1 7161 7363 -333 9 992 258 208 104 0 chr13 53461213 53461290 -66823022 + Lx7 LINE L1 7612 7696 0 9 992 205 111 0 62 chr13 53461767 53461815 -66822497 + GA-rich Low_complexity Low_complexity 2 46 0 9 992 310 285 130 62 chr13 53461815 53461961 -66822351 + HAL1-3A_ME LINE L1 2284 2439 -419 9 992 427 300 45 91 chr13 53463566 53463742 -66820570 + B3 SINE B2 49 216 0 9 992 234 91 0 0 chr13 53464103 53464136 -66820176 + (CAACG)n Simple_repeat Simple_repeat 3 35 0 9 992 646 164 35 0 chr13 53464389 53464505 -66819807 + B1_Mur1 SINE Alu 30 149 0 9 992 213 94 0 0 chr13 53464636 53464668 -66819644 + (GGGA)n Simple_repeat Simple_repeat 2 33 0 9 992 533 271 20 27 chr13 53464848 53464996 -66819316 - B1F1 SINE Alu -1 148 2 9 992 261 0 0 0 chr13 53465147 53465176 -66819136 + (A)n Simple_repeat Simple_repeat 1 29 0 9 992 386 187 309 0 chr13 53465244 53465367 -66818945 + RSINE1 SINE B4 4 164 -1 9 992 328 269 156 74 chr13 53465761 53466018 -66818294 + L1M2 LINE L1 3829 4106 -2037 9 992 304 312 121 74 chr13 53466581 53466771 -66817541 + L1MB7 LINE L1 5814 6012 -172 9 992 366 337 10 82 chr13 53467096 53467290 -66817022 + B3A SINE B2 3 182 -16 9 992 225 94 0 0 chr13 53467297 53467329 -66816983 + (CACG)n Simple_repeat Simple_repeat 4 35 0 9 992 317 264 59 76 chr13 53467423 53467542 -66816770 - PB1D10 SINE Alu 0 117 1 9 992 302 324 101 55 chr13 53467715 53467914 -66816398 + B4A SINE B4 85 292 0 9 992 267 259 73 12 chr13 53469916 53469998 -66814314 + B1_Mm SINE Alu 61 147 0 9 992 761 138 17 0 chr13 53470032 53470148 -66814164 - PB1D9 SINE Alu -2 118 1 9 992 764 223 82 52 chr13 53470291 53470485 -66813827 - B3 SINE B2 0 216 17 9 992 435 252 19 0 chr13 53470684 53470787 -66813525 + PB1D9 SINE Alu 13 117 -3 9 992 446 120 56 38 chr13 53470827 53470932 -66813380 - B1_Mur1 SINE Alu 0 149 4 9 992 246 32 0 0 chr13 53471117 53471148 -66813164 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 992 204 40 0 0 chr13 53471560 53471585 -66812727 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 9 992 243 283 108 11 chr13 53471993 53472086 -66812226 - MER3 DNA MER1_type 0 209 108 9 992 663 196 27 47 chr13 53473013 53473163 -66811149 + B1F2 SINE Alu 2 148 -1 9 992 1161 76 0 0 chr13 53473194 53473338 -66810974 + B1_Mus1 SINE Alu 1 144 -4 9 992 216 0 0 0 chr13 53473338 53473362 -66810950 + (TAA)n Simple_repeat Simple_repeat 1 24 0 9 992 587 288 24 24 chr13 53473726 53473867 -66810445 + B4 SINE B4 127 269 -23 9 992 234 0 0 0 chr13 53473867 53473893 -66810419 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 992 587 288 24 24 chr13 53473893 53473915 -66810397 + B4 SINE B4 270 290 -2 9 992 282 259 97 41 chr13 53473971 53474116 -66810196 - L1MD LINE L1 -723 5519 5367 9 992 684 31 0 39 chr13 53474159 53474261 -66810051 + (TTCC)n Simple_repeat Simple_repeat 2 99 0 9 992 559 281 83 0 chr13 53474269 53474299 -66810013 - B3 SINE B2 -6 210 179 9 992 474 18 0 0 chr13 53474299 53474354 -66809958 + (TG)n Simple_repeat Simple_repeat 2 56 0 9 992 559 281 83 0 chr13 53474354 53474515 -66809797 - B3 SINE B2 -38 178 4 9 992 290 202 25 12 chr13 53474525 53474605 -66809707 - L1MD LINE L1 -787 5359 5279 9 992 455 273 204 54 chr13 53474692 53475006 -66809306 + MLT1A1 LTR MaLR 1 361 -47 9 992 397 321 90 22 chr13 53475102 53475379 -66808933 - L1MB2 LINE L1 -171 6000 5705 9 992 511 255 158 94 chr13 53475394 53475597 -66808715 - ID_B1 SINE B4 0 224 9 9 992 822 91 0 0 chr13 53475664 53475785 -66808527 + (TG)n Simple_repeat Simple_repeat 2 122 0 9 992 1219 167 55 34 chr13 53475911 53476146 -66808166 + RMER20A LTR ERVK 1 240 -276 9 992 702 113 0 0 chr13 53476147 53476253 -66808059 + (TTCC)n Simple_repeat Simple_repeat 3 108 0 9 992 1210 68 0 0 chr13 53476268 53476415 -66807897 - B1_Mm SINE Alu 0 147 1 9 992 1416 176 42 46 chr13 53476415 53476700 -66807612 + RMER20A LTR ERVK 230 513 -3 9 992 1007 257 33 47 chr13 53476704 53476978 -66807334 - MTEa LTR MaLR -104 275 6 9 993 264 282 139 18 chr13 53477441 53477607 -66806705 - L1M4 LINE L1 -703 5471 5286 9 993 450 0 0 0 chr13 53477997 53478047 -66806265 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 993 559 71 12 12 chr13 53478084 53478170 -66806142 + (GGAA)n Simple_repeat Simple_repeat 2 87 0 9 993 265 278 37 9 chr13 53478212 53478321 -66805991 + L1MC LINE L1 5367 5478 -866 9 993 1810 162 83 62 chr13 53478510 53478884 -66805428 + ORR1C2 LTR MaLR 1 382 -2 9 993 305 326 106 50 chr13 53479043 53479346 -66804966 - L2 LINE L2 -354 3065 2746 9 993 2160 89 31 56 chr13 53479415 53479736 -66804576 + ORR1A2 LTR MaLR 15 327 0 9 993 944 249 0 30 chr13 53480462 53480661 -66803651 + B3 SINE B2 10 202 -14 9 993 2719 224 36 23 chr13 53481322 53481930 -66802382 - RLTR18 LTR ERVK 0 616 1 9 993 341 370 22 0 chr13 53481937 53482075 -66802237 + MER2 DNA MER2_type 141 281 -64 9 993 784 256 111 21 chr13 53482091 53482371 -66801941 - MER2 DNA MER2_type -40 305 1 9 993 2349 126 43 58 chr13 53482557 53482953 -66801359 + ORR1B1 LTR MaLR 5 394 0 9 993 654 115 24 16 chr13 53484181 53484305 -66800007 + (TATG)n Simple_repeat Simple_repeat 3 127 0 9 993 767 284 59 52 chr13 53484305 53484323 -66799989 - B4A SINE B4 0 292 276 9 993 992 131 0 6 chr13 53484323 53484499 -66799813 + (TATG)n Simple_repeat Simple_repeat 3 177 0 9 993 767 284 59 52 chr13 53484499 53484770 -66799542 - B4A SINE B4 -17 275 1 9 993 189 107 0 0 chr13 53485955 53485983 -66798329 + (TG)n Simple_repeat Simple_repeat 1 28 0 9 993 538 166 25 0 chr13 53485983 53486146 -66798166 + (CAGAGA)n Simple_repeat Simple_repeat 2 168 0 9 993 328 289 132 0 chr13 53486192 53486313 -66797999 - L2a LINE L2 -3 3423 3287 9 993 533 288 89 9 chr13 53486518 53486742 -66797570 + MLT1B LTR MaLR 7 248 -142 9 993 314 203 53 26 chr13 53486733 53486809 -66797503 + PB1D9 SINE Alu 43 120 0 9 993 441 325 81 5 chr13 53486886 53487096 -66797216 + MER2 DNA MER2_type 97 322 -23 9 993 374 187 84 42 chr13 53487228 53487323 -66796989 - RCHARR1 DNA MER1_type -1 973 875 1 993 1219 34 17 22 chr13 53487358 53487537 -66796775 + (TTCTC)n Simple_repeat Simple_repeat 2 179 0 1 993 335 156 23 15 chr13 53487539 53487669 -66796643 + RMER17A LTR ERVK 311 441 -310 1 993 1275 162 5 28 chr13 53487626 53487805 -66796507 + ORR1C2 LTR MaLR 174 353 -31 1 993 2285 135 12 64 chr13 53487805 53488225 -66796087 - RMER10B LTR ERVL 0 398 1 1 993 1275 162 5 28 chr13 53488225 53488261 -66796051 + ORR1C2 LTR MaLR 354 384 0 1 993 727 233 15 0 chr13 53488319 53488452 -66795860 - B3 SINE B2 -80 136 2 1 993 257 266 83 60 chr13 53488904 53489072 -66795240 + MER57D LTR ERV1 169 340 -71 1 993 180 97 0 0 chr13 53489952 53489983 -66794329 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 1 993 908 199 32 42 chr13 53490059 53490248 -66794064 - B2_Mm2 SINE B2 -8 187 1 1 993 180 0 0 0 chr13 53490258 53490278 -66794034 + (TG)n Simple_repeat Simple_repeat 1 20 0 1 993 874 241 19 0 chr13 53490351 53490558 -66793754 + B3 SINE B2 1 211 -5 1 993 538 273 143 0 chr13 53491673 53491827 -66792485 + B3A SINE B2 3 178 -20 1 993 486 49 0 0 chr13 53491837 53491898 -66792414 + (CA)n Simple_repeat Simple_repeat 1 61 0 1 993 230 192 198 37 chr13 53497886 53497967 -66786345 + Lx9 LINE L1 7070 7163 -481 1 993 2788 155 58 8 chr13 53498795 53499297 -66785015 + RLTR11A2 LTR ERVK 1 527 0 1 993 486 290 123 23 chr13 53499306 53499525 -66784787 + Tigger5 DNA MER2_type 2144 2384 -22 1 993 517 310 118 29 chr13 53499749 53499995 -66784317 + ORR1E LTR MaLR 33 300 -59 1 993 1159 297 44 29 chr13 53500036 53500421 -66783891 + MTE-int LTR MaLR 7 397 -1183 1 993 1892 155 182 6 chr13 53501075 53501426 -66782886 + MTC LTR MaLR 1 413 -8 2 993 2742 177 105 2 chr13 53501432 53501935 -66782377 + RMER4B LTR ERVK 31 585 0 3 993 2483 221 71 98 chr13 53502175 53502952 -66781360 + ORR1D-int LTR MaLR 54 812 -558 4 993 275 259 134 0 chr13 53502954 53503066 -66781246 + Lx9 LINE L1 7518 7644 0 5 993 204 88 59 0 chr13 53503066 53503100 -66781212 + (GAAA)n Simple_repeat Simple_repeat 4 39 0 6 993 2744 156 65 29 chr13 53503208 53503718 -66780594 - RLTR11A LTR ERVK 0 528 1 7 993 5998 204 159 105 chr13 53503719 53506003 -66778309 - MYSERV16_I-int LTR ERVK 0 2326 1 7 993 513 266 15 53 chr13 53506104 53506235 -66778077 - B1_Mur4 SINE Alu -6 144 19 8 993 2139 185 66 15 chr13 53507214 53507677 -66776635 + RLTR11A LTR ERVK 1 505 -23 9 993 372 236 0 39 chr13 53507707 53507861 -66776451 + (TATATG)n Simple_repeat Simple_repeat 3 150 0 1 993 657 338 3 33 chr13 53507867 53508167 -66776145 - B4A SINE B4 0 292 2 1 993 831 285 52 28 chr13 53508747 53509036 -66775276 - RMER15 LTR ERVL -55 520 225 1 993 1206 100 0 0 chr13 53514689 53514869 -66769443 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 993 892 110 48 7 chr13 53517263 53517409 -66766903 - ORR1D1 LTR MaLR -222 152 1 1 993 3448 204 48 29 chr13 53517409 53517467 -66766845 - ORR1D1-int LTR MaLR 0 1370 1321 1 993 2035 161 98 66 chr13 53517467 53517979 -66766333 - RLTR11A LTR ERVK 0 528 1 1 993 3448 204 48 29 chr13 53517979 53518668 -66765644 - ORR1D1-int LTR MaLR -50 1320 609 1 993 1732 183 73 0 chr13 53518674 53519002 -66765310 - Lx5 LINE L1 0 7050 6699 1 993 1566 196 148 3 chr13 53519010 53519374 -66764938 - ORR1D1-int LTR MaLR -731 639 223 1 993 645 168 83 8 chr13 53519376 53519496 -66764816 - RMER6C LTR ERVK -3 687 559 1 993 3501 102 47 0 chr13 53519500 53519992 -66764320 - RLTR33 LTR ERVK -2 676 162 1 993 557 211 29 29 chr13 53520010 53520147 -66764165 - Lx9 LINE L1 -179 7465 7329 1 993 1182 201 60 62 chr13 53520935 53521285 -66763027 - MTD LTR MaLR -13 406 1 2 993 180 0 0 0 chr13 53522463 53522483 -66761829 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 2 993 798 190 7 21 chr13 53522506 53522651 -66761661 - RSINE1 SINE B4 -21 144 2 2 993 1008 55 0 15 chr13 53522660 53522790 -66761522 + B1_Mus1 SINE Alu 21 148 0 2 993 264 333 136 30 chr13 53522968 53523166 -66761146 + MER21B LTR ERV1 626 844 -19 2 993 463 186 131 52 chr13 53523207 53523360 -66760952 - L1M4 LINE L1 -579 5595 5431 2 993 754 218 119 0 chr13 53523421 53523614 -66760698 - B3 SINE B2 0 216 1 2 993 3928 141 155 81 chr13 53523718 53524558 -66759754 - RMER19B LTR ERVK 0 902 1 2 993 747 166 231 0 chr13 53524661 53524830 -66759482 - B3 SINE B2 -6 210 3 2 993 1053 130 52 42 chr13 53524898 53525091 -66759221 - B2_Mm2 SINE B2 0 195 1 2 993 257 298 75 68 chr13 53525290 53525423 -66758889 - RMER15 LTR ERVL -168 407 274 3 993 289 279 17 51 chr13 53526900 53527017 -66757295 - L1MA9 LINE L1 -394 5918 5806 3 993 2150 39 0 4 chr13 53527253 53527513 -66756799 + L1Md_F3 LINE L1 6326 6584 0 3 993 27 49 0 0 chr13 53527523 53527564 -66756748 + AT_rich Low_complexity Low_complexity 1 41 0 3 993 927 284 123 23 chr13 53527820 53528169 -66756143 - Lx8 LINE L1 -179 7294 6911 3 993 996 104 0 22 chr13 53528190 53528327 -66755985 - B1_Mur2 SINE Alu -10 139 6 3 993 440 192 0 103 chr13 53528228 53528344 -66755968 - MT2B LTR ERVL -344 257 154 3 993 413 285 0 93 chr13 53528344 53528495 -66755817 - Lx8 LINE L1 -561 6912 6776 3 993 763 264 10 10 chr13 53528529 53528732 -66755580 - Lx9 LINE L1 -360 7284 7082 3 993 1631 202 105 0 chr13 53528821 53529163 -66755149 + RLTR30 LTR ERV1 1 378 -1 3 993 227 250 0 62 chr13 53533003 53533067 -66751245 - ID4_ SINE ID -20 63 4 3 993 237 235 29 14 chr13 53533067 53533127 -66751185 - PB1D9 SINE Alu -59 61 1 4 993 460 256 7 74 chr13 53533127 53533218 -66751094 - ID SINE ID -142 82 1 4 993 696 240 45 114 chr13 53533602 53533804 -66750508 + B3A SINE B2 5 192 -6 4 993 814 263 19 51 chr13 53534273 53534489 -66749823 - B4 SINE B4 -2 290 82 4 993 347 105 0 17 chr13 53534533 53534591 -66749721 + (TTCC)n Simple_repeat Simple_repeat 3 59 0 4 993 1031 108 14 0 chr13 53534597 53534745 -66749567 - B1_Mur4 SINE Alu 0 150 1 4 993 271 262 37 24 chr13 53534755 53534837 -66749475 - ID2 SINE ID 0 83 1 4 993 383 306 16 24 chr13 53535392 53535518 -66748794 + RMER15 LTR ERVL 325 449 -126 4 993 2417 63 9 0 chr13 53535518 53535834 -66748478 + ORR1A2 LTR MaLR 1 319 -8 4 993 340 283 62 0 chr13 53535840 53535953 -66748359 + RMER15 LTR ERVL 447 566 -9 4 993 349 293 24 0 chr13 53535946 53536028 -66748284 - PB1D10 SINE Alu -25 92 9 4 993 251 303 12 62 chr13 53535977 53536058 -66748254 - B4A SINE B4 -147 145 69 5 993 1648 166 3 64 chr13 53536774 53537116 -66747196 + ORR1A4 LTR MaLR 1 321 -8 5 993 242 182 23 125 chr13 53537048 53537136 -66747176 + MER57C2 LTR ERV1 11 89 -345 5 993 350 277 77 42 chr13 53538261 53538404 -66745908 + RSINE1 SINE B4 12 159 -6 5 993 1618 27 5 0 chr13 53538598 53538782 -66745530 + B2_Mm1t SINE B2 2 186 -7 5 993 24 0 0 0 chr13 53538811 53538835 -66745477 + AT_rich Low_complexity Low_complexity 1 24 0 5 993 29 60 0 0 chr13 53538872 53538922 -66745390 + AT_rich Low_complexity Low_complexity 1 50 0 5 993 511 307 0 0 chr13 53539818 53539932 -66744380 - B1F SINE Alu -34 115 2 5 993 302 317 0 96 chr13 53539831 53539946 -66744366 - MT2B2 LTR ERVL -329 255 152 5 993 189 0 0 0 chr13 53540637 53540658 -66743654 + (TGGGGG)n Simple_repeat Simple_repeat 4 24 0 5 993 697 209 7 28 chr13 53540842 53540985 -66743327 - B1F2 SINE Alu 0 149 10 6 993 883 238 57 71 chr13 53541578 53541621 -66742691 - MT2B LTR ERVL -8 593 541 6 993 441 0 0 0 chr13 53541621 53541670 -66742642 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 993 510 17 0 0 chr13 53541670 53541728 -66742584 + (TA)n Simple_repeat Simple_repeat 2 60 0 6 993 883 238 57 71 chr13 53541728 53541963 -66742349 - MT2B LTR ERVL -61 540 319 6 993 315 0 0 0 chr13 53542420 53542455 -66741857 + (TGG)n Simple_repeat Simple_repeat 1 35 0 6 993 261 0 0 0 chr13 53542455 53542484 -66741828 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 993 315 0 0 0 chr13 53542484 53542519 -66741793 + (GA)n Simple_repeat Simple_repeat 1 35 0 6 993 207 189 0 0 chr13 53542569 53542606 -66741706 + A-rich Low_complexity Low_complexity 2 38 0 6 993 189 0 0 0 chr13 53543287 53543308 -66741004 + (CCCCCA)n Simple_repeat Simple_repeat 4 24 0 6 993 271 204 19 0 chr13 53543686 53543740 -66740572 - Lx8 LINE L1 -1219 6254 6200 6 993 348 24 0 0 chr13 53543740 53543781 -66740531 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 993 489 88 0 0 chr13 53543781 53543861 -66740451 + (GA)n Simple_repeat Simple_repeat 1 80 0 7 993 284 329 105 64 chr13 53543864 53544160 -66740152 - Lx8 LINE L1 -1308 6165 5858 6 993 826 288 26 29 chr13 53544163 53544507 -66739805 + RLTR15 LTR ERVK 1 343 -16 7 993 935 276 244 24 chr13 53544511 53545179 -66739133 - Lx8 LINE L1 -28 5819 5005 6 993 543 96 0 0 chr13 53545620 53545703 -66738609 + (CA)n Simple_repeat Simple_repeat 2 84 0 7 993 295 276 28 9 chr13 53545911 53546017 -66738295 - PB1D10 SINE Alu -5 112 5 7 993 1186 70 32 0 chr13 53547091 53547247 -66737065 + B2_Mm2 SINE B2 1 161 -34 7 993 189 0 0 0 chr13 53547247 53547268 -66737044 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 7 993 1413 51 0 0 chr13 53547285 53547463 -66736849 + (GAA)n Simple_repeat Simple_repeat 3 180 0 7 993 2885 169 104 13 chr13 53547849 53548406 -66735906 + Lx5 LINE L1 6443 7050 0 7 993 180 0 0 0 chr13 53548785 53548805 -66735507 + (T)n Simple_repeat Simple_repeat 1 20 0 7 993 1037 116 6 0 chr13 53549126 53549290 -66735022 + (TTC)n Simple_repeat Simple_repeat 2 166 0 8 993 260 270 39 182 chr13 53549913 53550067 -66734245 + MIR3 SINE MIR 70 201 -7 8 993 216 0 0 0 chr13 53550068 53550092 -66734220 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 8 993 1148 221 74 96 chr13 53550815 53551181 -66733131 + MLT1A1 LTR MaLR 2 359 -49 8 993 639 269 11 8 chr13 53552290 53552494 -66731818 + L1MB3 LINE L1 5789 5996 -172 8 993 214 193 0 136 chr13 53552537 53552603 -66731709 + ID4 SINE ID 1 57 -26 8 993 306 310 10 10 chr13 53552624 53552725 -66731587 + L1MB3 LINE L1 6054 6154 -29 8 993 1488 68 5 5 chr13 53552749 53552940 -66731372 + B2_Mm1a SINE B2 1 191 -2 8 993 228 208 0 0 chr13 53552940 53552983 -66731329 + GA-rich Low_complexity Low_complexity 12 54 0 8 993 185 0 0 39 chr13 53553304 53553330 -66730982 + (TTA)n Simple_repeat Simple_repeat 2 26 0 8 993 334 267 257 0 chr13 53553330 53553431 -66730881 - B1F1 SINE Alu -10 139 13 8 993 212 122 24 0 chr13 53554467 53554508 -66729804 + (CAA)n Simple_repeat Simple_repeat 1 42 0 9 993 1107 56 42 0 chr13 53554826 53554968 -66729344 + B1_Mus1 SINE Alu 1 148 0 9 993 300 119 0 0 chr13 53555073 53555132 -66729180 + (G)n Simple_repeat Simple_repeat 1 59 0 9 993 239 257 14 41 chr13 53555423 53555496 -66728816 + ID4 SINE ID 3 73 -10 9 993 213 39 0 0 chr13 53555994 53556020 -66728292 + (TG)n Simple_repeat Simple_repeat 2 27 0 9 993 209 250 0 0 chr13 53556672 53556716 -66727596 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 993 263 187 231 39 chr13 53556718 53556796 -66727516 + PB1 SINE Alu 1 93 -34 9 993 344 219 84 12 chr13 53556730 53556813 -66727499 + ID_B1 SINE B4 93 181 -43 9 993 21 0 0 0 chr13 53558883 53558904 -66725408 + AT_rich Low_complexity Low_complexity 1 21 0 9 993 21 0 0 0 chr13 53559384 53559405 -66724907 + AT_rich Low_complexity Low_complexity 1 21 0 9 993 226 278 191 0 chr13 53560348 53560463 -66723849 + MIR SINE MIR 76 212 -50 1 993 22 0 0 0 chr13 53562254 53562276 -66722036 + AT_rich Low_complexity Low_complexity 1 22 0 1 993 21 0 0 0 chr13 53562304 53562325 -66721987 + AT_rich Low_complexity Low_complexity 1 21 0 1 993 441 0 0 0 chr13 53562498 53562547 -66721765 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 993 447 35 0 0 chr13 53562547 53562603 -66721709 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 993 24 32 0 0 chr13 53563270 53563301 -66721011 + AT_rich Low_complexity Low_complexity 1 31 0 1 993 453 19 0 0 chr13 53564068 53564122 -66720190 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 993 216 0 0 0 chr13 53565873 53565897 -66718415 + (GGGTG)n Simple_repeat Simple_repeat 3 26 0 1 993 208 300 143 48 chr13 53566032 53566179 -66718133 + MIR SINE MIR 91 251 -11 1 993 218 227 0 0 chr13 53566282 53566326 -66717986 + MIRc SINE MIR 189 232 -36 1 993 495 236 126 0 chr13 53567292 53567419 -66716893 + ID_B1 SINE B4 82 224 0 1 993 383 331 14 48 chr13 53568781 53568927 -66715385 - ID_B1 SINE B4 0 224 84 1 993 216 0 0 0 chr13 53569076 53569100 -66715212 + (T)n Simple_repeat Simple_repeat 1 24 0 1 993 28 29 0 0 chr13 53571505 53571540 -66712772 + GC_rich Low_complexity Low_complexity 1 35 0 1 993 239 245 19 0 chr13 53571797 53571850 -66712462 + MIR SINE MIR 77 130 -78 1 993 191 215 191 44 chr13 53573121 53573189 -66711123 - MIRc SINE MIR -71 197 120 1 993 1310 102 37 5 chr13 53573552 53573739 -66710573 - B2_Mm2 SINE B2 -1 194 2 1 993 483 237 16 56 chr13 53573771 53573896 -66710416 + PB1D7 SINE Alu 1 120 0 1 993 552 30 0 0 chr13 53574304 53574370 -66709942 + (TCCA)n Simple_repeat Simple_repeat 3 68 0 1 993 226 258 60 3 chr13 53574573 53574649 -66709663 + L2a LINE L2 3298 3421 -5 1 993 216 265 58 14 chr13 53574882 53574951 -66709361 - MIR SINE MIR -159 103 32 1 993 632 48 0 12 chr13 53575095 53575180 -66709132 + (TCCA)n Simple_repeat Simple_repeat 1 84 0 1 993 1062 102 19 0 chr13 53575188 53575404 -66708908 + (TCTA)n Simple_repeat Simple_repeat 1 219 0 1 993 406 307 50 44 chr13 53575419 53575579 -66708733 - RSINE1 SINE B4 -2 163 3 1 993 228 344 24 16 chr13 53575675 53575802 -66708510 - MIR SINE MIR -21 241 114 1 993 226 321 43 60 chr13 53576134 53576250 -66708062 + MIRb SINE MIR 46 159 -109 1 993 223 160 60 0 chr13 53576277 53576327 -66707985 + GA-rich Low_complexity Low_complexity 2 54 0 1 993 337 285 44 51 chr13 53576402 53576539 -66707773 + MIRb SINE MIR 63 198 -70 1 993 324 283 42 42 chr13 53577168 53577334 -66706978 + MIRb SINE MIR 36 201 -67 1 993 217 109 43 0 chr13 53577346 53577392 -66706920 + (TTG)n Simple_repeat Simple_repeat 3 50 0 1 993 210 233 40 27 chr13 53577820 53577895 -66706417 - PB1D10 SINE Alu -2 115 40 1 993 297 0 0 0 chr13 53577900 53577933 -66706379 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 993 360 217 0 0 chr13 53577936 53577996 -66706316 + tRNA-Ala-GCY_ tRNA tRNA 7 66 -9 1 993 366 23 0 0 chr13 53577996 53578039 -66706273 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 993 631 246 91 0 chr13 53578588 53578775 -66705537 + B3 SINE B2 2 205 -11 1 993 233 242 0 29 chr13 53578906 53578974 -66705338 + CT-rich Low_complexity Low_complexity 3 68 0 1 993 414 0 0 0 chr13 53579764 53579810 -66704502 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1 993 334 273 114 0 chr13 53580243 53580331 -66703981 + PB1D7 SINE Alu 13 110 -10 1 993 637 213 0 17 chr13 53580356 53580537 -66703775 + (CATA)n Simple_repeat Simple_repeat 1 178 0 1 993 930 161 0 0 chr13 53580937 53581080 -66703232 - B3 SINE B2 -2 214 72 1 993 352 146 0 0 chr13 53581415 53581470 -66702842 - B1F SINE Alu -21 128 74 1 993 476 237 0 0 chr13 53581470 53581563 -66702749 - B1_Mur2 SINE Alu -18 131 39 1 993 25 0 0 0 chr13 53581571 53581596 -66702716 + AT_rich Low_complexity Low_complexity 1 25 0 1 993 341 336 78 7 chr13 53581901 53582042 -66702270 + MIRb SINE MIR 95 245 -23 1 993 188 222 0 0 chr13 53582042 53582078 -66702234 + MIRb SINE MIR 223 258 -10 1 993 207 157 0 38 chr13 53582807 53582860 -66701452 + T-rich Low_complexity Low_complexity 1 51 0 1 993 840 128 0 0 chr13 53583691 53583824 -66700488 + (TC)n Simple_repeat Simple_repeat 1 133 0 1 993 297 0 0 0 chr13 53583903 53583936 -66700376 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 993 265 317 144 53 chr13 53584115 53584435 -66699877 - L2b LINE L2 -11 3364 3016 1 993 281 200 173 12 chr13 53585049 53585130 -66699182 + PB1D10 SINE Alu 15 108 -9 1 993 1816 218 140 62 chr13 53585392 53585958 -66698354 - RMER19C LTR ERVK 0 611 2 1 993 486 0 0 0 chr13 53586090 53586144 -66698168 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 993 486 0 0 0 chr13 53586144 53586197 -66698115 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 993 591 15 0 0 chr13 53586999 53587067 -66697245 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 993 1384 58 11 11 chr13 53587068 53587243 -66697069 - B2_Mm2 SINE B2 -19 176 2 1 993 502 299 52 7 chr13 53587662 53587797 -66696515 + ID_B1 SINE B4 82 222 -2 1 993 2479 164 115 50 chr13 53587869 53588214 -66696098 + RMER15 LTR ERVL 1 347 -228 1 993 2141 149 76 20 chr13 53588214 53588611 -66695701 + MTC LTR MaLR 1 419 -2 1 993 2479 164 115 50 chr13 53588611 53588803 -66695509 + RMER15 LTR ERVL 348 573 -2 1 993 254 289 79 0 chr13 53589149 53589225 -66695087 - ID2 SINE ID 0 83 2 1 993 485 271 74 117 chr13 53589600 53589830 -66694482 + L1MA8 LINE L1 5626 5845 -446 1 993 285 264 70 23 chr13 53589835 53589963 -66694349 + L1MA8 LINE L1 6065 6198 -102 1 993 404 221 113 19 chr13 53590287 53590393 -66693919 + PB1D7 SINE Alu 4 119 -1 1 993 2410 266 100 71 chr13 53590931 53591835 -66692477 + RCHARR1 DNA MER1_type 37 966 -8 1 993 183 319 13 77 chr13 53592253 53592331 -66691981 + L3 LINE CR1 4173 4245 -244 1 993 289 373 78 0 chr13 53592542 53592684 -66691628 - MIRc SINE MIR -4 264 112 1 993 792 32 0 0 chr13 53592957 53593052 -66691260 + (TTCC)n Simple_repeat Simple_repeat 2 96 0 1 993 297 358 10 2 chr13 53593064 53593180 -66691132 - L2a LINE L2 0 3426 3256 1 993 523 181 8 8 chr13 53594297 53594414 -66689898 + CT-rich Low_complexity Low_complexity 4 120 0 1 993 198 0 0 0 chr13 53594537 53594559 -66689753 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1 993 21 0 0 0 chr13 53594580 53594601 -66689711 + AT_rich Low_complexity Low_complexity 1 21 0 1 993 476 233 25 49 chr13 53595536 53595658 -66688654 - B3A SINE B2 -79 119 1 1 993 427 216 17 0 chr13 53595793 53595909 -66688403 + CT-rich Low_complexity Low_complexity 2 119 0 1 993 446 291 75 0 chr13 53596177 53596311 -66688001 - RSINE1 SINE B4 -19 146 3 1 993 272 217 57 14 chr13 53596340 53596410 -66687902 - ID2 SINE ID -3 80 8 1 993 1901 155 25 23 chr13 53596577 53597019 -66687293 + RMER17C LTR ERVK 19 441 -517 1 993 181 204 39 39 chr13 53597365 53597416 -66686896 - L2 LINE L2 -860 2559 2509 1 993 270 0 0 0 chr13 53597632 53597662 -66686650 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 993 243 0 0 0 chr13 53598262 53598289 -66686023 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 993 901 103 27 27 chr13 53598298 53598448 -66685864 - B1_Mur4 SINE Alu 0 150 1 1 993 416 271 45 8 chr13 53598455 53598589 -66685723 - ID_B1 SINE B4 -7 217 79 1 993 258 311 18 55 chr13 53598558 53598605 -66685707 + B4 SINE B4 40 144 -148 1 993 268 186 0 48 chr13 53598605 53598667 -66685645 + B1_Mus1 SINE Alu 2 60 -88 1 993 643 125 31 0 chr13 53598681 53598777 -66685535 + B1_Mur3 SINE Alu 40 138 -11 1 993 234 237 0 0 chr13 53598951 53599010 -66685302 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 993 510 280 79 13 chr13 53599013 53599165 -66685147 - B3 SINE B2 -51 165 4 1 993 382 289 39 15 chr13 53599376 53599506 -66684806 + MamRep137 DNA TcMar? 163 295 -149 1 993 288 0 0 0 chr13 53599765 53599797 -66684515 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 1 993 264 123 94 20 chr13 53600125 53600274 -66684038 + C-rich Low_complexity Low_complexity 4 163 0 1 993 213 121 0 0 chr13 53600636 53600669 -66683643 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 1 993 765 305 59 3 chr13 53600723 53601010 -66683302 - B4 SINE B4 0 292 41 1 993 235 143 0 143 chr13 53601206 53601255 -66683057 - ID4 SINE ID -38 45 2 1 993 1784 176 57 37 chr13 53601300 53601512 -66682800 - RMER17C LTR ERVK 0 410 194 1 993 1036 124 6 11 chr13 53601512 53601691 -66682621 + (GGA)n Simple_repeat Simple_repeat 1 178 0 1 993 446 0 0 18 chr13 53601692 53601747 -66682565 + (GGAGA)n Simple_repeat Simple_repeat 1 54 0 1 993 1784 176 57 37 chr13 53601747 53601934 -66682378 - RMER17C LTR ERVK -217 193 7 1 993 534 237 0 0 chr13 53603336 53603429 -66680883 + B1_Mur2 SINE Alu 1 93 -56 1 993 242 305 71 35 chr13 53603434 53603604 -66680708 - RLTR21 LTR ERVK -319 1253 1078 1 993 360 182 14 43 chr13 53603610 53603679 -66680633 + B1F SINE Alu 83 149 0 1 993 383 361 24 10 chr13 53603752 53603959 -66680353 + L1ME3 LINE L1 5172 5381 -765 1 993 222 378 19 10 chr13 53604921 53605045 -66679267 - B1_Mur4 SINE Alu -19 131 1 1 993 735 278 20 12 chr13 53605289 53605533 -66678779 - L1MB8 LINE L1 -208 5970 5725 1 993 400 226 70 35 chr13 53605664 53605806 -66678506 - L1MB1 LINE L1 -240 5949 5803 1 993 275 71 24 0 chr13 53605828 53605870 -66678442 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 993 1102 100 0 7 chr13 53605891 53606042 -66678270 - B1_Mur4 SINE Alu 0 150 1 1 993 314 290 87 103 chr13 53606188 53606394 -66677918 + L1ME3 LINE L1 5863 6060 -102 1 993 777 227 31 80 chr13 53606394 53606619 -66677693 - B3 SINE B2 0 216 3 2 993 314 290 87 103 chr13 53606619 53606712 -66677600 + L1ME3 LINE L1 6061 6157 -5 1 993 563 289 0 20 chr13 53607021 53607173 -66677139 - B1F2 SINE Alu 0 149 1 2 993 384 272 26 0 chr13 53607335 53607449 -66676863 + PB1D10 SINE Alu 1 117 0 2 993 2483 254 68 37 chr13 53607603 53608199 -66676113 - Lx8 LINE L1 -134 7339 6721 2 124 3270 64 2 5 chr13 53608199 53608607 -66675705 - MTB_Mm LTR MaLR 0 407 1 2 994 2483 254 68 37 chr13 53608607 53608735 -66675577 - Lx8 LINE L1 -753 6720 6593 2 994 517 242 29 29 chr13 53608738 53608874 -66675438 - Lx8 LINE L1 -997 6476 6341 2 994 786 312 105 25 chr13 53608884 53609022 -66675290 - L1_Mur3 LINE L1 -2190 3690 3547 2 994 3452 30 17 12 chr13 53609022 53609427 -66674885 + MTB_Mm LTR MaLR 1 407 0 2 994 786 312 105 25 chr13 53609427 53609925 -66674387 - L1_Mur3 LINE L1 -2334 3546 3003 2 994 263 106 43 0 chr13 53609928 53609975 -66674337 + (TCCCC)n Simple_repeat Simple_repeat 3 51 0 2 994 714 283 6 17 chr13 53610013 53610189 -66674123 - B3A SINE B2 -16 182 9 2 994 1342 327 51 94 chr13 53610218 53610575 -66673737 - L1M4c LINE L1 -2818 3265 2984 2 994 822 184 20 0 chr13 53610575 53610722 -66673590 + B1_Mur4 SINE Alu 1 150 0 2 994 1342 319 47 90 chr13 53610722 53611674 -66672638 - L1M4c LINE L1 -3100 2983 1539 2 994 2310 93 3 64 chr13 53611751 53612097 -66672215 + ORR1A2 LTR MaLR 1 325 -2 2 994 968 153 0 0 chr13 53612215 53612365 -66671947 - B1_Mur4 SINE Alu 0 150 1 2 994 598 229 49 0 chr13 53612464 53612586 -66671726 - B1_Mur2 SINE Alu -16 133 6 2 994 902 167 58 48 chr13 53612994 53613183 -66671129 - B2_Mm2 SINE B2 -4 191 1 2 994 311 303 13 66 chr13 53613451 53613603 -66670709 - B1F SINE Alu 0 149 6 2 994 746 248 7 0 chr13 53614236 53614389 -66669923 - RSINE1 SINE B4 -2 163 10 2 994 363 121 0 0 chr13 53614413 53614471 -66669841 + (TATG)n Simple_repeat Simple_repeat 1 58 0 2 994 307 231 208 25 chr13 53614508 53614628 -66669684 + B1F SINE Alu 5 146 -3 2 994 369 133 0 0 chr13 53614681 53614756 -66669556 + (A)n Simple_repeat Simple_repeat 1 75 0 2 994 367 276 66 25 chr13 53615098 53615295 -66669017 + L1MC5 LINE L1 7694 7898 -63 2 994 23 0 0 0 chr13 53615474 53615497 -66668815 + AT_rich Low_complexity Low_complexity 1 23 0 2 994 546 293 77 52 chr13 53617597 53617921 -66666391 - MLT1A LTR MaLR 0 374 43 2 994 24 0 0 0 chr13 53618190 53618214 -66666098 + AT_rich Low_complexity Low_complexity 1 24 0 2 994 1829 239 60 6 chr13 53618533 53619000 -66665312 - Lx9 LINE L1 -10 7634 7143 2 994 215 273 0 0 chr13 53619457 53619501 -66664811 + polypyrimidine Low_complexity Low_complexity 3 46 0 2 994 529 226 158 6 chr13 53619594 53619759 -66664553 - B3A SINE B2 -4 194 5 2 994 245 268 69 11 chr13 53619823 53619910 -66664402 + ORR1E LTR MaLR 268 359 0 2 994 192 77 0 0 chr13 53620570 53620596 -66663716 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 2 994 329 323 10 0 chr13 53621688 53621787 -66662525 - MLT1A1 LTR MaLR -16 392 293 2 994 934 83 7 29 chr13 53622147 53622284 -66662028 - RMER19A LTR ERVK 0 737 604 2 994 410 310 100 84 chr13 53622280 53622660 -66661652 + MLT1A1 LTR MaLR 23 408 0 2 994 303 96 0 0 chr13 53622972 53623024 -66661288 + (T)n Simple_repeat Simple_repeat 1 52 0 2 994 1723 21 0 0 chr13 53623026 53623216 -66661096 - B2_Mm1t SINE B2 -3 190 1 2 994 499 281 167 101 chr13 53623376 53623968 -66660344 + MLT1A1-int LTR MaLR 168 769 -720 2 994 414 282 57 106 chr13 53624053 53624270 -66660042 + MLT1A1-int LTR MaLR 1068 1303 -186 2 994 427 271 22 22 chr13 53624304 53624440 -66659872 - Charlie4a DNA MER1_type -335 173 38 2 994 340 181 53 0 chr13 53624889 53624983 -66659329 + CT-rich Low_complexity Low_complexity 3 101 0 2 994 230 258 152 43 chr13 53625085 53625223 -66659089 + MER53 DNA hAT 38 190 -3 2 994 334 267 122 49 chr13 53625800 53625916 -66658396 - PB1D10 SINE Alu -22 127 1 2 994 221 279 24 71 chr13 53626665 53626750 -66657562 - ID4_ SINE ID -2 81 1 2 994 196 244 116 47 chr13 53628952 53629081 -66655231 + MIRc SINE MIR 88 225 -43 2 994 783 0 0 0 chr13 53629660 53629747 -66654565 + (TTTC)n Simple_repeat Simple_repeat 3 89 0 2 994 234 307 13 26 chr13 53629757 53629834 -66654478 - MER106B DNA MER1_type -77 982 907 2 994 747 261 41 20 chr13 53630011 53630217 -66654095 - B3 SINE B2 0 216 15 2 994 182 226 21 41 chr13 53630380 53630477 -66653835 + CT-rich Low_complexity Low_complexity 1 95 0 2 994 211 355 102 53 chr13 53631439 53631560 -66652752 - MIRb SINE MIR -1 267 154 2 994 180 111 0 0 chr13 53631560 53631587 -66652725 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 994 211 355 102 53 chr13 53631587 53631691 -66652621 - MIRb SINE MIR -115 153 32 2 994 468 53 316 9 chr13 53632072 53632186 -66652126 - B2_Mm2 SINE B2 0 195 47 2 994 1423 51 23 0 chr13 53632214 53632389 -66651923 - B2_Mm2 SINE B2 -14 181 3 2 994 1983 273 89 28 chr13 53632826 53633534 -66650778 + Lx8 LINE L1 6354 7104 -369 2 994 268 328 65 36 chr13 53633905 53634044 -66650268 + MIRb SINE MIR 87 229 -39 2 994 496 235 0 0 chr13 53634512 53634610 -66649702 - B1F SINE Alu -51 98 1 2 994 345 305 59 59 chr13 53634784 53634920 -66649392 + ORR1E LTR MaLR 3 138 -221 2 994 357 252 19 0 chr13 53634979 53635087 -66649225 + PB1D10 SINE Alu 2 111 -6 2 994 191 341 59 0 chr13 53635934 53636019 -66648293 + L2c LINE L2 3253 3342 -45 2 994 398 293 258 18 chr13 53636200 53636534 -66647778 + MLT1D LTR MaLR 29 442 -63 2 994 1045 159 11 6 chr13 53636734 53636911 -66647401 + B2_Mm1t SINE B2 1 178 -15 2 994 331 125 388 0 chr13 53636963 53637066 -66647246 + B2_Mm2 SINE B2 47 189 -6 2 994 226 241 108 48 chr13 53637404 53637487 -66646825 + LTR90A LTR LTR 747 834 -142 2 994 372 119 0 0 chr13 53637880 53637939 -66646373 + (GGA)n Simple_repeat Simple_repeat 3 61 0 2 994 1091 124 6 0 chr13 53637939 53638116 -66646196 + (GAA)n Simple_repeat Simple_repeat 1 178 0 2 994 537 30 0 0 chr13 53639167 53639234 -66645078 + (TG)n Simple_repeat Simple_repeat 1 67 0 2 994 298 274 120 49 chr13 53639271 53639413 -66644899 + MIRb SINE MIR 52 203 -65 2 994 263 339 63 18 chr13 53639598 53639709 -66644603 + MIRb SINE MIR 66 181 -87 2 994 201 289 45 6 chr13 53640045 53640135 -66644177 + MIR SINE MIR 42 138 -130 2 994 1479 236 97 101 chr13 53640235 53640792 -66643520 - RLTR20B3 LTR ERVK -22 555 1 2 994 298 262 45 45 chr13 53640881 53640969 -66643343 + L2c LINE L2 3300 3387 0 2 994 262 288 0 0 chr13 53641143 53641202 -66643110 - tRNA-Ala-GCY_ tRNA tRNA -15 60 2 2 994 571 315 0 29 chr13 53641418 53641588 -66642724 - B4A SINE B4 -6 286 122 2 994 310 360 135 8 chr13 53641725 53641977 -66642335 + L1M5 LINE L1 4743 5026 -1120 2 994 280 312 38 0 chr13 53642167 53642247 -66642065 + ID4_ SINE ID 1 83 0 2 994 509 318 98 54 chr13 53643210 53643486 -66640826 + B4A SINE B4 5 292 0 2 994 203 311 16 0 chr13 53643493 53643554 -66640758 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 994 447 162 120 10 chr13 53643574 53643674 -66640638 + PB1D9 SINE Alu 3 113 -7 2 994 457 252 70 16 chr13 53643958 53644087 -66640225 + MIRb SINE MIR 19 154 -114 2 994 572 196 140 97 chr13 53644628 53644669 -66639643 - B3A SINE B2 0 198 170 2 994 312 48 0 0 chr13 53644669 53644711 -66639601 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 994 572 196 140 97 chr13 53644711 53644855 -66639457 - B3A SINE B2 -29 169 5 2 994 224 73 0 68 chr13 53645154 53645174 -66639138 + (TTTC)n Simple_repeat Simple_repeat 4 23 0 2 994 1521 62 5 0 chr13 53645174 53645366 -66638946 - B2_Mm1a SINE B2 0 193 1 2 994 224 73 0 68 chr13 53645366 53645389 -66638923 + (TTTC)n Simple_repeat Simple_repeat 3 23 0 2 994 424 158 13 52 chr13 53645636 53645790 -66638522 + (TTATA)n Simple_repeat Simple_repeat 1 148 0 2 994 249 146 0 0 chr13 53645815 53645863 -66638449 + (CATAT)n Simple_repeat Simple_repeat 2 49 0 2 994 535 310 95 27 chr13 53646021 53646243 -66638069 - ORR1E LTR MaLR -57 302 66 2 994 709 259 0 0 chr13 53646258 53646393 -66637919 - ORR1E-int LTR MaLR -30 1550 1416 2 994 731 225 7 7 chr13 53646397 53646536 -66637776 + B3 SINE B2 1 139 -77 2 994 555 262 77 35 chr13 53646525 53646695 -66637617 - ORR1E-int LTR MaLR -1103 477 301 2 994 485 267 0 9 chr13 53646693 53646799 -66637513 - ORR1E-int LTR MaLR -1451 129 25 2 994 709 299 59 56 chr13 53646860 53647159 -66637153 - ORR1E LTR MaLR -25 334 35 2 994 625 67 9 9 chr13 53647159 53647264 -66637048 + (TCTCTG)n Simple_repeat Simple_repeat 2 106 0 2 994 488 286 172 0 chr13 53647306 53647355 -66636957 - B4A SINE B4 -6 286 238 2 994 459 0 0 0 chr13 53647355 53647406 -66636906 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 994 488 286 172 0 chr13 53647406 53647559 -66636753 - B4A SINE B4 -55 237 50 2 994 360 156 0 0 chr13 53648173 53648263 -66636049 + (TG)n Simple_repeat Simple_repeat 1 90 0 2 994 288 191 0 0 chr13 53648308 53648392 -66635920 + (CAGA)n Simple_repeat Simple_repeat 1 84 0 2 994 194 128 43 0 chr13 53648411 53648458 -66635854 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 2 994 202 228 0 50 chr13 53648471 53648531 -66635781 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 2 994 343 119 0 29 chr13 53649198 53649267 -66635045 + (ATG)n Simple_repeat Simple_repeat 1 67 0 2 994 1320 287 19 45 chr13 53649358 53649785 -66634527 + Kanga2_a DNA Tc2 25 440 -448 2 994 650 82 21 0 chr13 53650421 53650518 -66633794 + (TTTC)n Simple_repeat Simple_repeat 4 102 0 2 994 277 324 92 50 chr13 53650935 53651160 -66633152 - MER102c DNA MER1_type -2112 316 66 2 994 2661 126 45 19 chr13 53651930 53652351 -66631961 + RMER17C-int LTR ERVK 2807 3238 0 2 994 728 136 61 0 chr13 53652351 53652483 -66631829 + RMER17C LTR ERVK 1 140 -270 2 994 490 130 10 29 chr13 53652484 53652587 -66631725 + RMER17C LTR ERVK 310 410 0 2 994 1044 151 0 0 chr13 53653471 53653650 -66630662 + (TTG)n Simple_repeat Simple_repeat 1 179 0 2 994 1011 170 0 3 chr13 53653650 53653944 -66630368 + (CTG)n Simple_repeat Simple_repeat 1 293 0 2 994 525 133 0 0 chr13 53654809 53654907 -66629405 + (CA)n Simple_repeat Simple_repeat 2 99 0 2 994 2088 195 7 27 chr13 53656853 53656979 -66627333 + MTC LTR MaLR 16 139 -282 2 994 297 0 0 0 chr13 53656979 53657012 -66627300 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 994 2088 195 7 27 chr13 53657012 53657291 -66627021 + MTC LTR MaLR 140 413 -8 2 994 348 252 68 43 chr13 53657295 53657400 -66626912 + B3 SINE B2 63 171 -27 3 994 419 164 5 67 chr13 53657451 53657583 -66626729 + B1F SINE Alu 1 117 -3 3 994 805 259 57 84 chr13 53657586 53657885 -66626427 + B4 SINE B4 2 292 0 3 994 427 183 16 23 chr13 53657892 53658021 -66626291 + (CATA)n Simple_repeat Simple_repeat 4 131 0 3 994 281 328 57 28 chr13 53659072 53659213 -66625099 + MIRb SINE MIR 27 171 -97 3 994 391 346 98 48 chr13 53659818 53660197 -66624115 + L1MC LINE L1 5401 5798 -2084 3 994 868 155 7 13 chr13 53661589 53661739 -66622573 - B1_Mur4 SINE Alu -1 149 1 3 994 2042 149 9 6 chr13 53662399 53662737 -66621575 - RMER6-int LTR ERVK -2838 339 1 3 994 2995 138 113 33 chr13 53662737 53663376 -66620936 - RMER6C LTR ERVK 0 690 1 3 994 1494 146 4 24 chr13 53663388 53663640 -66620672 - RMER6-int LTR ERVK -16 3161 2915 3 994 1519 132 0 74 chr13 53663613 53663883 -66620429 + RMER6-int LTR ERVK 2714 2963 -214 3 994 1349 148 0 0 chr13 53663876 53664086 -66620226 - RMER6-int LTR ERVK -1724 1453 1244 3 994 1861 123 87 81 chr13 53664087 53664433 -66619879 - ORR1B1 LTR MaLR 0 394 47 3 994 2555 124 113 5 chr13 53664506 53665095 -66619217 - RMER6-int LTR ERVK -1951 1226 575 3 994 3052 103 226 0 chr13 53665105 53665640 -66618672 - RMER6C LTR ERVK -34 656 1 3 994 235 384 83 17 chr13 53665724 53665904 -66618408 - MLT1L LTR MaLR -244 366 175 3 994 285 187 77 39 chr13 53665997 53666075 -66618237 + ID2 SINE ID 2 82 -1 3 994 580 311 144 90 chr13 53666082 53666594 -66617718 + MLT1E1 LTR MaLR 19 652 -2 3 994 234 310 0 54 chr13 53667141 53667233 -66617079 - MLT1C LTR MaLR -210 257 171 3 994 458 264 46 114 chr13 53667234 53667409 -66616903 + RSINE1 SINE B4 3 165 0 3 994 419 261 133 24 chr13 53667443 53667608 -66616704 - MLT1C LTR MaLR -281 186 4 3 994 1098 244 68 32 chr13 53667826 53668135 -66616177 - ORR1E LTR MaLR -36 323 4 3 994 565 302 63 105 chr13 53669485 53669943 -66614369 + RLTR12B LTR ERVK 47 485 -43 3 994 180 97 0 0 chr13 53671192 53671223 -66613089 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 994 384 302 38 60 chr13 53673695 53673878 -66610434 - MIR SINE MIR -6 256 78 3 994 326 268 26 26 chr13 53673878 53673993 -66610319 + L1M5 LINE L1 2709 2823 -3323 3 994 436 132 0 24 chr13 53674197 53674282 -66610030 + GA-rich Low_complexity Low_complexity 3 85 0 3 994 1338 73 0 0 chr13 53674283 53674462 -66609850 + (GGAGAA)n Simple_repeat Simple_repeat 2 180 0 3 994 289 344 90 46 chr13 53674491 53674969 -66609343 + L1M5 LINE L1 3133 3631 -2515 3 994 448 191 24 0 chr13 53674999 53675083 -66609229 + B1_Mur4 SINE Alu 1 86 -64 3 994 302 159 32 0 chr13 53675162 53675225 -66609087 + (TATATG)n Simple_repeat Simple_repeat 2 66 0 3 994 248 281 16 0 chr13 53675225 53675289 -66609023 + L1M2 LINE L1 4051 4115 -2028 3 994 207 0 0 0 chr13 53675909 53675932 -66608380 + (T)n Simple_repeat Simple_repeat 1 23 0 3 994 2439 158 22 7 chr13 53675996 53676411 -66607901 + MTC LTR MaLR 1 421 0 3 994 2386 189 218 10 chr13 53676806 53677415 -66606897 + RMER19A LTR ERVK 2 737 0 3 994 493 178 9 18 chr13 53677419 53677528 -66606784 + MTC-int LTR MaLR 1148 1255 -3 3 994 1847 208 7 35 chr13 53677531 53677666 -66606646 + MTC LTR MaLR 1 133 -288 3 994 1360 89 28 0 chr13 53677666 53677845 -66606467 + B2_Mm2 SINE B2 3 186 -9 3 994 1847 208 7 35 chr13 53677845 53678133 -66606179 + MTC LTR MaLR 134 412 -9 3 994 483 295 43 7 chr13 53678404 53678544 -66605768 + RSINE1 SINE B4 1 145 -20 3 994 343 366 38 0 chr13 53678589 53678824 -66605488 + L1M2 LINE L1 2209 2452 -3691 3 994 2953 83 50 20 chr13 53678838 53679282 -66605030 + Lx LINE L1 6181 6637 -17 3 994 371 315 0 0 chr13 53680560 53680671 -66603641 - MLT1G1 LTR MaLR -45 534 424 3 994 664 242 109 16 chr13 53680711 53680967 -66603345 - Tigger2b DNA MER2_type -382 344 65 3 994 643 196 6 63 chr13 53681731 53681889 -66602423 + B1_Mur1 SINE Alu 1 149 0 3 994 306 0 0 0 chr13 53683340 53683374 -66600938 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 994 1257 101 26 26 chr13 53684365 53684559 -66599753 + B2_Mm2 SINE B2 1 194 -1 3 994 21 36 0 0 chr13 53684966 53684994 -66599318 + AT_rich Low_complexity Low_complexity 1 28 0 3 994 22 0 0 0 chr13 53686577 53686599 -66597713 + AT_rich Low_complexity Low_complexity 1 22 0 3 994 482 264 187 14 chr13 53686600 53686819 -66597493 - Lx9 LINE L1 -61 7583 7327 3 994 31 26 0 0 chr13 53687413 53687451 -66596861 + AT_rich Low_complexity Low_complexity 1 38 0 3 994 657 0 0 0 chr13 53687451 53687524 -66596788 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 994 450 0 0 0 chr13 53687607 53687657 -66596655 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 994 407 174 41 0 chr13 53688944 53689042 -66595270 - PB1D9 SINE Alu -14 106 5 3 994 243 0 0 0 chr13 53689826 53689853 -66594459 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 994 319 193 68 82 chr13 53690157 53690304 -66594008 - L1MA8 LINE L1 -377 5914 5770 3 994 299 318 51 38 chr13 53690381 53690538 -66593774 + MLT1A1 LTR MaLR 248 406 -2 3 994 228 321 89 27 chr13 53691343 53691455 -66592857 + PB1D9 SINE Alu 2 120 0 3 994 303 286 0 0 chr13 53691765 53691842 -66592470 + ID4 SINE ID 4 80 -3 3 994 23 0 0 0 chr13 53692082 53692105 -66592207 + AT_rich Low_complexity Low_complexity 1 23 0 3 994 198 0 0 0 chr13 53693977 53693999 -66590313 + (CAAAC)n Simple_repeat Simple_repeat 3 24 0 3 994 1242 100 0 0 chr13 53695147 53695327 -66588985 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 994 896 164 6 0 chr13 53695340 53695517 -66588795 + CT-rich Low_complexity Low_complexity 3 180 0 3 994 343 282 0 0 chr13 53695543 53695614 -66588698 - PB1D10 SINE Alu -26 91 21 3 994 315 0 0 0 chr13 53697190 53697225 -66587087 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 994 374 299 91 62 chr13 53697924 53698134 -66586178 - MER20 DNA MER1_type 0 219 4 3 994 295 284 78 35 chr13 53699316 53699474 -66584838 + ORR1E LTR MaLR 1 171 -203 3 994 193 324 44 0 chr13 53699720 53699788 -66584524 + MIRb SINE MIR 167 237 -31 3 994 200 214 0 0 chr13 53701171 53701213 -66583099 + MIR SINE MIR 110 151 -111 3 994 511 220 6 23 chr13 53701395 53701572 -66582740 + (TA)n Simple_repeat Simple_repeat 1 174 0 3 994 204 40 0 0 chr13 53701567 53701592 -66582720 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 994 771 242 22 22 chr13 53701602 53701784 -66582528 - B3 SINE B2 -34 182 1 3 994 285 193 45 26 chr13 53702367 53702468 -66581844 + B1_Mm SINE Alu 41 149 0 3 994 1238 61 91 0 chr13 53702474 53702639 -66581673 + B2_Mm2 SINE B2 2 181 -14 3 994 751 176 51 14 chr13 53703754 53703892 -66580420 + B1_Mur2 SINE Alu 1 143 -6 3 994 476 74 25 0 chr13 53704020 53704101 -66580211 + (TCTG)n Simple_repeat Simple_repeat 4 86 0 3 994 528 287 38 13 chr13 53704265 53704424 -66579888 - RSINE1 SINE B4 0 165 3 3 994 405 283 34 73 chr13 53704424 53704603 -66579709 - L1_Mur2 LINE L1 -3467 2413 2232 3 994 219 150 0 0 chr13 53704626 53704666 -66579646 + B3A SINE B2 1 40 -158 3 994 544 299 91 51 chr13 53704853 53705107 -66579205 + B4A SINE B4 28 291 -1 3 994 239 309 0 14 chr13 53705524 53705593 -66578719 - ID4 SINE ID -14 69 2 3 994 206 62 31 0 chr13 53706001 53706033 -66578279 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 3 994 557 289 7 0 chr13 53706190 53706342 -66577970 - ID_B1 SINE B4 -1 223 71 3 994 389 229 12 0 chr13 53706456 53706539 -66577773 - L1M2 LINE L1 -524 5776 5693 3 994 2484 174 11 7 chr13 53706557 53707014 -66577298 + RMER15 LTR ERVL 1 459 -116 3 994 341 291 25 85 chr13 53707014 53707213 -66577099 - RLTR23 LTR ERV1 0 430 244 3 994 482 181 67 0 chr13 53707544 53707649 -66576663 + RMER15 LTR ERVL 461 572 -3 3 994 569 220 0 0 chr13 53707649 53707763 -66576549 - RSINE1 SINE B4 -49 116 3 3 994 239 272 11 32 chr13 53709174 53709269 -66575043 + GA-rich Low_complexity Low_complexity 4 96 0 3 994 324 0 0 0 chr13 53709356 53709392 -66574920 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 994 313 338 18 36 chr13 53709731 53709897 -66574415 + MER2B DNA MER2_type 174 336 0 3 994 16038 152 31 28 chr13 53711205 53714636 -66569676 - L1_Mur3 LINE L1 -1582 4298 859 3 994 690 282 9 31 chr13 53714630 53714857 -66569455 - L1_Mur3 LINE L1 -7167 561 340 3 994 436 277 75 6 chr13 53714910 53715070 -66569242 - L1_Mur3 LINE L1 -7502 226 56 3 994 216 0 0 0 chr13 53715479 53715503 -66568809 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 994 356 284 69 21 chr13 53716114 53716258 -66568054 + MLT1B LTR MaLR 8 158 -232 3 994 438 36 0 0 chr13 53716260 53716316 -66567996 + (CTCA)n Simple_repeat Simple_repeat 3 58 0 3 994 413 254 158 66 chr13 53716319 53716674 -66567638 - MLT1C LTR MaLR -46 421 8 3 994 360 0 0 0 chr13 53718145 53718185 -66566127 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 994 684 307 26 0 chr13 53718239 53718428 -66565884 - ID_B1 SINE B4 -29 195 2 3 994 21 36 0 0 chr13 53718480 53718508 -66565804 + AT_rich Low_complexity Low_complexity 1 28 0 3 994 1232 203 19 86 chr13 53718532 53718845 -66565467 - Lx5 LINE L1 0 7050 6759 3 994 431 204 21 0 chr13 53718844 53718937 -66565375 - Lx4B LINE L1 -393 6665 6571 3 994 270 225 0 66 chr13 53718948 53719024 -66565288 - Lx4B LINE L1 -826 6232 6162 3 994 506 266 82 74 chr13 53719105 53719349 -66564963 - Lx8 LINE L1 -2 7471 7225 3 994 1153 76 0 0 chr13 53719349 53719494 -66564818 + B1_Mus1 SINE Alu 2 146 -2 3 994 506 266 82 74 chr13 53719494 53719505 -66564807 - Lx8 LINE L1 -249 7224 7214 3 994 492 62 0 0 chr13 53719514 53719578 -66564734 + (GGAA)n Simple_repeat Simple_repeat 3 66 0 3 994 1452 248 50 12 chr13 53719578 53719978 -66564334 - Lx8 LINE L1 -236 7237 6823 3 994 1338 303 46 25 chr13 53719996 53720517 -66563795 - Lx8 LINE L1 -494 6979 6448 3 994 962 288 129 43 chr13 53720546 53720991 -66563321 - L1M2 LINE L1 -758 5122 4650 3 994 582 65 0 32 chr13 53720991 53721086 -66563226 + (TCTA)n Simple_repeat Simple_repeat 4 95 0 3 994 962 288 129 43 chr13 53721086 53721331 -66562981 - L1M2 LINE L1 -1488 4655 4373 3 994 342 0 0 0 chr13 53721334 53721372 -66562940 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 994 509 284 39 6 chr13 53721504 53721660 -66562652 - Lx8 LINE L1 -96 7377 7217 3 994 405 295 60 30 chr13 53721665 53721864 -66562448 - L1M2 LINE L1 -1583 4297 4093 3 994 237 355 38 22 chr13 53721870 53722054 -66562258 - L1_Rod LINE L1 -6523 649 463 3 994 671 81 0 10 chr13 53722639 53722739 -66561573 + (TTCC)n Simple_repeat Simple_repeat 1 99 0 4 994 236 91 20 102 chr13 53722777 53722826 -66561486 + MIRm SINE MIR 229 273 -3 4 994 315 0 0 0 chr13 53722996 53723031 -66561281 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 4 994 284 315 94 88 chr13 53723398 53723558 -66560754 + Tigger5 DNA MER2_type 2245 2405 -1 4 994 320 365 87 20 chr13 53723561 53723757 -66560555 + MLT1F LTR MaLR 336 544 -4 4 994 231 232 35 47 chr13 53723880 53723966 -66560346 + ORR1E LTR MaLR 128 212 -147 4 994 1307 296 147 40 chr13 53724104 53725970 -66558342 - L1M3 LINE L1 -606 5578 3490 4 994 372 287 10 19 chr13 53726921 53727024 -66557288 + Tigger5 DNA MER2_type 143 244 -2162 4 994 323 279 13 0 chr13 53727047 53727126 -66557186 + Tigger5 DNA MER2_type 2327 2406 0 4 994 730 73 37 0 chr13 53727209 53727345 -66556967 + (CA)n Simple_repeat Simple_repeat 1 141 0 4 994 302 263 91 0 chr13 53727351 53727465 -66556847 - LTR16C LTR ERVL -15 553 383 4 994 242 211 17 17 chr13 53728490 53728548 -66555764 + MER103 DNA DNA 47 104 -62 4 994 946 225 9 86 chr13 53728647 53728880 -66555432 + B3 SINE B2 2 216 0 4 994 23 0 0 0 chr13 53730685 53730708 -66553604 + AT_rich Low_complexity Low_complexity 1 23 0 4 994 734 220 28 5 chr13 53730729 53730908 -66553404 - B3A SINE B2 -11 205 26 4 994 375 201 7 14 chr13 53731085 53731226 -66553086 + (TAAA)n Simple_repeat Simple_repeat 2 141 0 4 994 409 265 161 39 chr13 53731378 53731584 -66552728 - MER2 DNA MER2_type -1 335 91 4 994 308 310 134 47 chr13 53732063 53732212 -66552100 + RSINE1 SINE B4 1 162 -3 4 994 321 319 70 86 chr13 53732701 53733016 -66551296 + MLT1A LTR MaLR 65 374 0 4 994 1237 25 25 6 chr13 53733777 53733938 -66550374 + L1Md_F3 LINE L1 6418 6581 -3 4 994 596 14 14 0 chr13 53734343 53734416 -66549896 + (TC)n Simple_repeat Simple_repeat 1 74 0 4 994 261 0 0 0 chr13 53734416 53734444 -66549868 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 994 319 285 130 14 chr13 53734889 53735035 -66549277 - Tigger7 DNA MER2_type -89 2402 2240 4 994 672 282 0 30 chr13 53738850 53739018 -66545294 - B3A SINE B2 -32 166 4 4 124 591 274 90 20 chr13 53739336 53739641 -66544671 - MTEa LTR MaLR -2 377 52 4 995 337 293 13 0 chr13 53739668 53739743 -66544569 - MTEa LTR MaLR -303 76 1 4 995 3063 277 166 58 chr13 53739745 53741168 -66543144 - MTEa-int LTR MaLR -2 1578 1 4 995 1073 264 84 40 chr13 53741168 53741354 -66542958 - MTEa LTR MaLR -17 362 174 4 995 2073 116 3 116 chr13 53741354 53741725 -66542587 - ORR1A4 LTR MaLR 0 329 1 4 995 1073 264 84 40 chr13 53741725 53741885 -66542427 - MTEa LTR MaLR -206 173 1 4 995 1601 164 44 159 chr13 53741998 53742432 -66541880 + ORR1C2 LTR MaLR 1 384 0 4 995 394 308 83 16 chr13 53742637 53742811 -66541501 + MIRb SINE MIR 27 204 -64 4 995 238 322 185 15 chr13 53742965 53743170 -66541142 + MIRc SINE MIR 16 255 -13 4 995 361 138 25 0 chr13 53743852 53743932 -66540380 + (CGTG)n Simple_repeat Simple_repeat 1 82 0 4 995 247 302 167 8 chr13 53745579 53745699 -66538613 + MIRb SINE MIR 118 256 -12 4 995 281 215 11 0 chr13 53745813 53745906 -66538406 + (CAT)n Simple_repeat Simple_repeat 2 95 0 4 995 342 115 0 0 chr13 53745906 53745958 -66538354 + (TCC)n Simple_repeat Simple_repeat 2 53 0 4 995 334 324 99 26 chr13 53747521 53747762 -66536550 + MIRb SINE MIR 7 262 0 4 995 523 261 105 45 chr13 53747974 53748313 -66535999 + L1M4 LINE L1 4904 5266 -874 4 995 354 45 0 0 chr13 53748817 53748861 -66535451 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 995 423 0 0 0 chr13 53748957 53749004 -66535308 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 995 286 139 34 62 chr13 53749685 53749861 -66534451 + (TA)n Simple_repeat Simple_repeat 2 172 0 4 995 267 31 0 0 chr13 53749870 53749902 -66534410 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 995 228 162 0 0 chr13 53750049 53750086 -66534226 - MIRc SINE MIR -148 120 84 4 995 1056 276 81 11 chr13 53750504 53750852 -66533460 - Lx8 LINE L1 -354 7119 6748 4 995 1026 335 97 43 chr13 53750989 53751504 -66532808 - Tigger7 DNA MER2_type -1942 549 7 4 995 301 315 57 57 chr13 53751947 53752156 -66532156 - L1MC3 LINE L1 -129 7656 7448 4 995 303 224 48 95 chr13 53752160 53752244 -66532068 + MTEa LTR MaLR 3 82 -297 4 995 4861 67 34 8 chr13 53752403 53753049 -66531263 - L1_Mus3 LINE L1 0 6638 5976 4 995 460 338 43 66 chr13 53753055 53753312 -66531000 + MLT1D LTR MaLR 255 505 0 4 995 360 119 0 0 chr13 53753815 53753874 -66530438 + (GGA)n Simple_repeat Simple_repeat 2 60 0 4 995 240 246 49 0 chr13 53753903 53753964 -66530348 - ORR1E LTR MaLR -223 136 73 4 995 195 306 14 0 chr13 53754172 53754255 -66530057 + MIRc SINE MIR 82 168 -100 4 995 568 222 0 11 chr13 53754395 53754577 -66529735 + GA-rich Low_complexity Low_complexity 1 180 0 4 995 914 292 154 36 chr13 53756208 53756616 -66527696 + L1MC1 LINE L1 5381 5847 -1938 4 995 204 40 0 0 chr13 53756616 53756641 -66527671 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 995 914 296 121 53 chr13 53756641 53757098 -66527214 + L1MC1 LINE L1 5848 6333 0 4 995 535 185 6 34 chr13 53757538 53757717 -66526595 + (TCCA)n Simple_repeat Simple_repeat 3 176 0 4 995 759 188 11 29 chr13 53757742 53758027 -66526285 + (TCCA)n Simple_repeat Simple_repeat 1 279 0 4 995 607 310 103 38 chr13 53759170 53759539 -66524773 - Lx8 LINE L1 -7 7466 7074 4 995 788 219 103 19 chr13 53761080 53761281 -66523031 - B3 SINE B2 -27 189 1 4 995 2027 290 91 67 chr13 53761746 53763001 -66521311 - Lx8 LINE L1 -614 6859 5535 4 995 771 186 60 42 chr13 53763027 53763195 -66521117 - B2_Mm2 SINE B2 -23 172 2 4 995 502 247 45 23 chr13 53763288 53763502 -66520810 - Lx8 LINE L1 -402 5478 5262 4 995 1013 193 69 0 chr13 53763531 53763733 -66520579 - B3 SINE B2 0 216 1 4 995 786 281 27 20 chr13 53763827 53764121 -66520191 - L1M2 LINE L1 -2295 3848 3553 4 995 416 237 80 34 chr13 53764124 53764310 -66520002 - MLT1D LTR MaLR -369 255 41 4 995 575 296 61 30 chr13 53767472 53767702 -66516610 - RMER15 LTR ERVL -43 532 296 4 995 450 0 0 0 chr13 53768809 53768859 -66515453 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 995 279 0 0 0 chr13 53768859 53768889 -66515423 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 995 2527 60 38 0 chr13 53768933 53769248 -66515064 - ORR1A2 LTR MaLR 0 327 1 4 995 898 192 60 35 chr13 53770299 53770499 -66513813 - B3 SINE B2 -11 205 1 4 995 264 59 0 0 chr13 53770526 53770560 -66513752 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 4 995 365 41 0 0 chr13 53770978 53771027 -66513285 + B1_Mm SINE Alu 99 147 0 4 995 529 295 211 64 chr13 53771789 53772239 -66512073 + MT2A LTR ERVL 1 516 -17 4 995 205 320 13 26 chr13 53772326 53772403 -66511909 + MIR SINE MIR 69 144 -118 4 995 206 292 70 83 chr13 53773339 53773496 -66510816 + MIRc SINE MIR 89 243 -25 4 995 305 261 10 42 chr13 53773500 53773596 -66510716 + MIRc SINE MIR 105 197 -71 4 995 180 0 0 0 chr13 53773699 53773719 -66510593 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 995 188 111 0 0 chr13 53773726 53773753 -66510559 + MIRm SINE MIR 228 254 -22 4 995 242 326 61 27 chr13 53774291 53774439 -66509873 - MIR SINE MIR -86 176 24 4 995 1615 298 66 19 chr13 53774507 53775037 -66509275 + MER63D DNA AcHobo 3 557 -504 4 995 228 273 0 29 chr13 53775089 53775157 -66509155 + ID4 SINE ID 2 67 -16 4 995 793 194 0 11 chr13 53775298 53775480 -66508832 + CT-rich Low_complexity Low_complexity 1 180 0 4 995 207 0 0 0 chr13 53775620 53775643 -66508669 + (A)n Simple_repeat Simple_repeat 1 23 0 4 995 501 17 0 0 chr13 53776033 53776091 -66508221 + (GA)n Simple_repeat Simple_repeat 2 59 0 4 995 517 191 0 0 chr13 53776116 53776200 -66508112 + B4 SINE B4 1 84 -208 4 995 991 106 6 6 chr13 53776206 53776367 -66507945 + (CA)n Simple_repeat Simple_repeat 2 162 0 4 995 687 298 19 28 chr13 53777507 53777718 -66506594 + MIRb SINE MIR 44 252 -16 4 995 399 276 0 0 chr13 53778648 53778735 -66505577 - ID_B1 SINE B4 -26 198 112 4 995 273 309 62 21 chr13 53778657 53778753 -66505559 - B1_Mur1 SINE Alu -38 111 12 4 995 361 229 73 45 chr13 53779014 53779124 -66505188 - B3 SINE B2 -2 214 102 4 995 887 179 0 6 chr13 53779126 53779306 -66505006 + (TA)n Simple_repeat Simple_repeat 1 179 0 4 995 397 131 33 0 chr13 53779306 53779367 -66504945 - B3A SINE B2 -113 85 23 4 995 191 359 54 84 chr13 53779680 53779847 -66504465 - MIR3 SINE MIR -42 166 5 4 995 180 0 0 0 chr13 53780070 53780090 -66504222 + (T)n Simple_repeat Simple_repeat 1 20 0 4 995 437 0 19 0 chr13 53780171 53780224 -66504088 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 995 188 242 226 0 chr13 53780277 53780339 -66503973 + MIRc SINE MIR 90 165 -103 4 995 378 0 0 0 chr13 53780539 53780581 -66503731 + (CAGG)n Simple_repeat Simple_repeat 1 42 0 4 995 184 274 196 21 chr13 53781015 53781112 -66503200 + MIRb SINE MIR 154 267 -1 4 995 369 0 0 0 chr13 53782954 53782995 -66501317 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 995 544 318 76 55 chr13 53783048 53783284 -66501028 - MER2 DNA MER2_type 0 345 105 4 995 319 224 43 78 chr13 53783285 53783401 -66500911 + L1MCa LINE L1 1851 1962 -4546 4 995 247 222 0 62 chr13 53783409 53783421 -66500891 + ID SINE ID 75 83 -141 4 995 213 329 178 0 chr13 53783421 53783494 -66500818 + PB1D10 SINE Alu 3 88 -29 4 995 369 0 0 0 chr13 53783498 53783539 -66500773 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 995 651 13 0 0 chr13 53784727 53784803 -66499509 + (GA)n Simple_repeat Simple_repeat 2 77 0 4 995 187 214 0 67 chr13 53784882 53784927 -66499385 + MER5A DNA MER1_type 1 42 -147 4 995 1209 221 170 6 chr13 53785140 53785458 -66498854 + MTD LTR MaLR 36 405 -14 4 995 847 252 58 15 chr13 53785761 53786026 -66498286 + L1MC1 LINE L1 5572 5845 -488 4 995 831 154 6 12 chr13 53786037 53786208 -66498104 + GA-rich Low_complexity Low_complexity 2 171 0 5 995 3624 65 21 6 chr13 53786233 53786701 -66497611 - MT2C_Mm LTR ERVL 0 475 1 5 995 207 0 0 0 chr13 53787449 53787472 -66496840 + (T)n Simple_repeat Simple_repeat 1 23 0 5 995 495 308 7 36 chr13 53788123 53788261 -66496051 - MIRb SINE MIR -79 189 56 5 995 677 103 19 0 chr13 53788450 53788557 -66495755 + (TATG)n Simple_repeat Simple_repeat 2 110 0 5 995 253 321 25 0 chr13 53788574 53788655 -66495657 - B1_Mus1 SINE Alu -58 90 8 5 995 337 68 0 0 chr13 53789061 53789105 -66495207 - HAL1-3A_ME LINE L1 -839 2019 1976 5 995 420 191 0 0 chr13 53789115 53789199 -66495113 + (TG)n Simple_repeat Simple_repeat 2 85 0 5 995 1127 272 87 22 chr13 53789235 53789626 -66494686 + RLTR20B3 LTR ERVK 140 524 -3 5 995 279 253 11 33 chr13 53789626 53789810 -66494502 + (TATG)n Simple_repeat Simple_repeat 1 180 0 5 995 262 304 13 0 chr13 53789929 53790008 -66494304 - MER63C DNA AcHobo -565 365 286 5 995 385 326 148 43 chr13 53790496 53790752 -66493560 - L1MEg LINE L1 -5662 422 140 5 995 759 282 68 83 chr13 53790936 53791273 -66493039 + MLT1A1 LTR MaLR 77 408 0 5 995 405 123 0 0 chr13 53791311 53791376 -66492936 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 995 228 250 0 67 chr13 53791831 53791891 -66492421 + MIRb SINE MIR 53 108 -160 5 995 542 220 0 7 chr13 53793170 53793312 -66491000 + (TG)n Simple_repeat Simple_repeat 2 142 0 5 995 237 65 0 0 chr13 53793521 53793552 -66490760 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 995 329 258 145 66 chr13 53794141 53794307 -66490005 - HAL1-3A_ME LINE L1 -396 2462 2284 5 995 359 145 14 0 chr13 53795835 53795904 -66488408 + GA-rich Low_complexity Low_complexity 2 71 0 5 995 369 255 35 70 chr13 53796189 53796303 -66488009 + PB1D10 SINE Alu 6 115 -2 5 995 235 376 86 31 chr13 53796664 53796955 -66487357 - L2a LINE L2 -208 3218 2912 5 995 342 248 171 21 chr13 53797541 53797681 -66486631 - MLT1B LTR MaLR -226 164 4 5 995 693 170 0 0 chr13 53798136 53798248 -66486064 + B1F2 SINE Alu 38 149 0 5 995 729 326 26 17 chr13 53798789 53799023 -66485289 + B4A SINE B4 1 236 -56 5 995 450 0 0 0 chr13 53799045 53799095 -66485217 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 995 1246 251 62 15 chr13 53799452 53799776 -66484536 - ORR1E LTR MaLR -16 343 5 5 995 293 254 16 0 chr13 53799839 53799902 -66484410 + PB1 SINE Alu 11 74 -53 5 995 357 336 195 52 chr13 53799888 53800323 -66483989 - MLT1D LTR MaLR -8 497 1 5 995 367 312 141 27 chr13 53800925 53801163 -66483149 - L1MDb LINE L1 -4018 2615 2358 5 995 459 0 0 0 chr13 53801163 53801214 -66483098 + (TTTTA)n Simple_repeat Simple_repeat 5 55 0 5 995 273 320 0 0 chr13 53801215 53801290 -66483022 - ID4 SINE ID -6 77 3 5 995 301 346 62 55 chr13 53801290 53801324 -66482988 - L1MDb LINE L1 -4262 2371 2339 5 995 486 0 0 0 chr13 53801483 53801537 -66482775 + (TTTTG)n Simple_repeat Simple_repeat 1 54 0 5 995 724 226 0 21 chr13 53801786 53801926 -66482386 - B1_Mur2 SINE Alu -2 147 11 5 995 378 247 6 25 chr13 53801933 53802091 -66482221 + C-rich Low_complexity Low_complexity 1 155 0 5 995 582 244 38 0 chr13 53802093 53802224 -66482088 - B1F SINE Alu -13 136 1 5 995 452 254 26 17 chr13 53802474 53802590 -66481722 - PB1D7 SINE Alu 0 120 4 5 995 707 338 68 51 chr13 53802600 53803245 -66481067 - L1MDb LINE L1 -5071 1469 814 5 995 632 265 26 21 chr13 53803264 53803453 -66480859 - MLT2D LTR ERVL -224 190 1 5 995 218 279 16 0 chr13 53803534 53803595 -66480717 + (TCCA)n Simple_repeat Simple_repeat 3 64 0 5 995 209 277 31 0 chr13 53803565 53803630 -66480682 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 5 995 874 158 14 0 chr13 53803669 53803808 -66480504 - B1_Mur3 SINE Alu -8 141 1 5 995 225 0 0 0 chr13 53803923 53803948 -66480364 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 995 21 57 0 0 chr13 53804337 53804372 -66479940 + AT_rich Low_complexity Low_complexity 1 35 0 5 995 223 261 0 0 chr13 53805764 53805810 -66478502 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 995 636 339 35 12 chr13 53805818 53806072 -66478240 + MLT2D LTR ERVL 103 362 -52 5 995 234 326 0 5 chr13 53806766 53806953 -66477359 + (TGGA)n Simple_repeat Simple_repeat 1 185 0 5 995 377 259 35 35 chr13 53807006 53807122 -66477190 - PB1D7 SINE Alu 0 120 5 5 995 368 299 0 116 chr13 53807171 53807292 -66477020 - B4 SINE B4 0 292 186 5 995 237 65 0 0 chr13 53807449 53807480 -66476832 + (TGG)n Simple_repeat Simple_repeat 1 31 0 5 995 349 325 193 46 chr13 53808141 53808447 -66475865 + MLT1F2 LTR MaLR 106 456 -113 5 995 359 350 96 43 chr13 53808674 53809168 -66475144 - L1M5 LINE L1 -3090 3056 2541 5 995 214 333 93 47 chr13 53810691 53810820 -66473492 + MIR SINE MIR 94 228 -40 5 995 187 31 30 30 chr13 53811106 53811139 -66473173 + (TTA)n Simple_repeat Simple_repeat 2 34 0 5 995 202 0 0 83 chr13 53811413 53811449 -66472863 + (CAAAAA)n Simple_repeat Simple_repeat 1 33 0 5 995 5135 196 30 36 chr13 53811604 53812681 -66471631 - Lx6 LINE L1 -105 7591 6252 5 995 602 347 122 24 chr13 53814435 53815072 -66469240 - L1MB4 LINE L1 -1 6179 5480 5 995 1585 192 52 38 chr13 53815099 53815467 -66468845 + RMER1C Other Other 960 1332 -10 5 995 516 32 0 0 chr13 53815467 53815529 -66468783 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 995 777 214 63 24 chr13 53815580 53815786 -66468526 - B3 SINE B2 0 216 3 5 995 199 320 104 38 chr13 53815833 53816044 -66468268 - L2a LINE L2 -15 3411 3187 5 995 360 0 0 0 chr13 53816981 53817021 -66467291 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 5 995 2022 211 34 22 chr13 53817393 53817805 -66466507 - MTC LTR MaLR 0 421 5 5 995 192 233 62 88 chr13 53817806 53817886 -66466426 - L2a LINE L2 -789 2630 2553 5 995 184 171 0 54 chr13 53817979 53818053 -66466259 + (CAGAGA)n Simple_repeat Simple_repeat 2 71 0 5 995 338 177 38 12 chr13 53818093 53818253 -66466059 + (CAGAGA)n Simple_repeat Simple_repeat 4 167 0 5 995 280 372 116 58 chr13 53818493 53818787 -66465525 - LTR88a LTR Gypsy -30 786 476 5 995 1330 179 5 0 chr13 53818827 53819051 -66465261 - URR1B DNA MER1_type 0 225 1 5 995 355 282 38 0 chr13 53820148 53820306 -66464006 - L1M5 LINE L1 -365 5819 5650 5 995 328 304 71 14 chr13 53820731 53820871 -66463441 - L1M5 LINE L1 -531 5643 5496 5 995 3145 231 70 23 chr13 53820958 53821911 -66462401 - MTB_Mm-int LTR MaLR -309 1061 1 5 995 210 71 0 0 chr13 53821925 53821953 -66462359 + (TTG)n Simple_repeat Simple_repeat 3 30 0 5 995 3027 54 52 3 chr13 53822015 53822403 -66461909 - MTB_Mm LTR MaLR 0 407 1 5 995 701 253 72 6 chr13 53822404 53822571 -66461741 - ORR1C1 LTR MaLR -192 178 1 5 995 1150 196 78 86 chr13 53822571 53822898 -66461414 - ORR1C1-int LTR MaLR -51 1529 1064 5 995 3206 64 0 29 chr13 53822989 53823407 -66460905 - MTB_Mm LTR MaLR 0 407 2 5 995 297 0 0 0 chr13 53823407 53823440 -66460872 + (CTAA)n Simple_repeat Simple_repeat 4 36 0 5 995 258 200 0 32 chr13 53823718 53823780 -66460532 - RSINE1 SINE B4 -95 70 11 5 995 1376 158 68 123 chr13 53824401 53824741 -66459571 - ORR1C1 LTR MaLR -57 321 1 5 995 242 296 19 0 chr13 53824838 53824892 -66459420 - ID4 SINE ID -23 60 6 5 995 519 17 0 0 chr13 53824911 53824971 -66459341 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 5 995 796 332 4 47 chr13 53825074 53825330 -66458982 - B4A SINE B4 0 292 48 5 995 207 0 0 0 chr13 53826561 53826584 -66457728 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 995 1949 131 56 12 chr13 53826693 53827032 -66457280 + ORR1B1 LTR MaLR 41 394 0 5 995 2244 143 64 16 chr13 53827577 53827953 -66456359 - ORR1B1 LTR MaLR 0 394 1 5 995 317 322 60 53 chr13 53828042 53828193 -66456119 - MIR SINE MIR -103 159 8 5 995 216 339 118 8 chr13 53828328 53828447 -66455865 - L2c LINE L2 -49 3338 3207 5 995 1364 98 10 5 chr13 53828650 53828844 -66455468 + B2_Mm2 SINE B2 1 195 0 5 995 288 130 0 0 chr13 53828844 53828890 -66455422 + (GAAAA)n Simple_repeat Simple_repeat 3 48 0 5 995 997 288 77 60 chr13 53830831 53831197 -66453115 + MTEb LTR MaLR 1 372 -7 5 995 619 301 74 9 chr13 53831209 53831440 -66452872 + MER2 DNA MER2_type 99 344 -1 5 995 269 140 120 0 chr13 53831469 53831519 -66452793 + ID SINE ID 2 57 -167 5 995 242 252 18 45 chr13 53832697 53832738 -66451574 - RMER17D LTR ERVK -386 503 465 5 995 1020 111 0 0 chr13 53832738 53832918 -66451394 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 995 242 252 18 45 chr13 53832918 53833100 -66451212 - RMER17D LTR ERVK -425 464 286 5 995 242 201 53 13 chr13 53833113 53833264 -66451048 + (CAGAGA)n Simple_repeat Simple_repeat 4 160 0 5 995 271 222 68 14 chr13 53834823 53834896 -66449416 - MER2B DNA MER2_type -81 255 179 5 995 575 287 87 22 chr13 53834973 53835158 -66449154 - B4A SINE B4 -2 290 94 5 995 431 275 42 63 chr13 53835419 53835609 -66448703 - RMER15 LTR ERVL -5 570 385 5 995 220 154 0 49 chr13 53836223 53836264 -66448048 + polypurine Low_complexity Low_complexity 1 39 0 5 995 239 344 0 0 chr13 53837370 53837463 -66446849 + (TCCA)n Simple_repeat Simple_repeat 4 96 0 5 995 591 161 0 0 chr13 53837692 53837853 -66446459 + (TCTCTG)n Simple_repeat Simple_repeat 4 164 0 5 995 216 158 0 0 chr13 53837911 53837968 -66446344 + (TCTCTG)n Simple_repeat Simple_repeat 1 57 0 5 995 202 256 0 0 chr13 53837968 53838046 -66446266 + (TCTG)n Simple_repeat Simple_repeat 1 78 0 5 995 230 10 0 158 chr13 53838168 53838288 -66446024 + (CTGTG)n Simple_repeat Simple_repeat 1 101 0 5 995 247 241 0 0 chr13 53838172 53838251 -66446061 + (TCTG)n Simple_repeat Simple_repeat 4 82 0 5 995 705 294 148 45 chr13 53838622 53839157 -66445155 - L1_Mur3 LINE L1 -438 5442 4853 5 995 1230 109 0 33 chr13 53839168 53839187 -66445125 - B2_Mm2 SINE B2 -20 175 162 5 995 219 69 0 0 chr13 53839187 53839216 -66445096 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 5 995 1230 109 0 33 chr13 53839216 53839377 -66444935 - B2_Mm2 SINE B2 -34 161 1 5 995 198 0 0 0 chr13 53839378 53839400 -66444912 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 995 3343 270 69 35 chr13 53839402 53840715 -66443597 - L1_Mur3 LINE L1 -1046 4834 3477 5 995 631 250 32 96 chr13 53840772 53840934 -66443378 - Lx9 LINE L1 -7 7637 7496 6 995 1237 34 7 0 chr13 53840934 53841080 -66443232 - B1_Mm SINE Alu 0 147 1 6 995 631 250 32 96 chr13 53841080 53841262 -66443050 - Lx9 LINE L1 -149 7495 7315 6 995 270 73 0 0 chr13 53841266 53841307 -66443005 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 6 995 840 174 38 19 chr13 53841347 53841498 -66442814 - MTC LTR MaLR 0 421 268 6 995 504 0 0 0 chr13 53841498 53841554 -66442758 + (TC)n Simple_repeat Simple_repeat 2 57 0 6 995 840 156 36 873 chr13 53841554 53841622 -66442690 - MTC LTR MaLR -154 267 262 6 995 3298 45 7 15 chr13 53841646 53842056 -66442256 + MTB_Mm LTR MaLR 1 407 0 6 995 1153 226 34 37 chr13 53842056 53842354 -66441958 - Lx9 LINE L1 -446 7198 6902 6 995 1186 315 51 39 chr13 53842364 53843087 -66441225 - L1_Rod LINE L1 -2824 3023 2292 6 995 691 262 100 59 chr13 53843254 53843493 -66440819 - MTD LTR MaLR -16 403 155 6 995 300 266 31 31 chr13 53843497 53843594 -66440718 - MIR SINE MIR -134 128 32 6 995 215 268 133 10 chr13 53844192 53844290 -66440022 + MIRc SINE MIR 113 222 -46 6 995 381 111 72 24 chr13 53844628 53844794 -66439518 + (TCTA)n Simple_repeat Simple_repeat 3 176 0 6 995 224 183 0 96 chr13 53844794 53844909 -66439403 + (CAT)n Simple_repeat Simple_repeat 2 105 0 6 995 613 28 97 14 chr13 53844913 53845058 -66439254 + (TCTA)n Simple_repeat Simple_repeat 2 158 0 6 995 1305 249 120 8 chr13 53845644 53846001 -66438311 - MTD LTR MaLR -4 415 19 6 995 4601 147 29 82 chr13 53847904 53848807 -66435505 - RMER21A LTR ERV1 -92 855 1 6 995 273 146 0 0 chr13 53849756 53849804 -66434508 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 995 21 0 0 0 chr13 53850090 53850111 -66434201 + GC_rich Low_complexity Low_complexity 1 21 0 6 995 768 119 0 0 chr13 53852074 53852192 -66432120 + (TCCC)n Simple_repeat Simple_repeat 3 120 0 6 995 196 333 0 0 chr13 53853432 53853495 -66430817 - MIRc SINE MIR -110 158 96 6 995 187 255 21 21 chr13 53853482 53853530 -66430782 - L2b LINE L2 0 3375 3328 6 995 984 288 29 42 chr13 53854191 53854572 -66429740 - RMER17C LTR ERVK -34 376 1 6 995 309 306 51 7 chr13 53854711 53854866 -66429446 + L1M2 LINE L1 5309 5470 -827 6 995 283 336 30 15 chr13 53855065 53855198 -66429114 - ORR1E LTR MaLR -223 136 2 6 995 264 329 36 0 chr13 53855343 53855480 -66428832 + L1M2 LINE L1 5630 5771 -520 6 995 972 214 23 19 chr13 53855520 53855734 -66428578 + ORR1D2 LTR MaLR 156 370 0 6 995 334 379 142 22 chr13 53855803 53856070 -66428242 + MLT1K LTR MaLR 129 427 -168 6 995 234 318 0 0 chr13 53856430 53856493 -66427819 + MLT1A1 LTR MaLR 77 139 -235 6 995 288 247 10 101 chr13 53856570 53856669 -66427643 + MLT1A1 LTR MaLR 319 408 0 6 995 187 109 64 21 chr13 53857472 53857519 -66426793 + GA-rich Low_complexity Low_complexity 5 53 0 6 995 571 11 45 11 chr13 53857976 53858065 -66426247 + (TG)n Simple_repeat Simple_repeat 1 92 0 6 995 1070 176 52 29 chr13 53858283 53858493 -66425819 + B3 SINE B2 2 216 0 6 995 263 342 26 26 chr13 53858662 53858776 -66425536 + MLT1A0 LTR MaLR 252 365 0 6 995 200 288 162 0 chr13 53859874 53859954 -66424358 + MIRc SINE MIR 175 267 -1 6 995 234 164 35 52 chr13 53860107 53860165 -66424147 - MIRc SINE MIR -101 167 111 6 995 238 263 28 0 chr13 53861202 53861270 -66423042 - MIRb SINE MIR -59 203 132 6 995 243 146 0 40 chr13 53861867 53861917 -66422395 - ORR1D2 LTR MaLR 0 370 323 6 995 673 226 11 0 chr13 53861940 53862117 -66422195 + CT-rich Low_complexity Low_complexity 2 180 0 6 995 1193 257 75 10 chr13 53862118 53862413 -66421899 - ORR1D2 LTR MaLR -56 314 1 6 995 1405 294 110 96 chr13 53862555 53863533 -66420779 - Charlie1a DNA MER1_type -201 1254 263 6 995 22 0 0 0 chr13 53863561 53863583 -66420729 + AT_rich Low_complexity Low_complexity 1 22 0 6 995 250 329 23 12 chr13 53863588 53863674 -66420638 - Tigger5 DNA MER2_type -9 2397 2311 6 995 327 281 74 67 chr13 53863761 53863910 -66420402 - Tigger5 DNA MER2_type -2256 150 1 6 995 315 0 0 0 chr13 53864340 53864375 -66419937 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 995 283 355 171 40 chr13 53864741 53864893 -66419419 + MLT1J2 LTR MaLR 70 257 -191 6 995 965 199 70 19 chr13 53864893 53865108 -66419204 - URR1A DNA MER1_type 0 226 1 6 995 283 355 171 40 chr13 53865108 53865207 -66419105 + MLT1J2 LTR MaLR 258 354 -94 6 995 240 86 0 0 chr13 53866014 53866049 -66418263 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 995 372 22 0 0 chr13 53866242 53866287 -66418025 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 995 342 61 0 0 chr13 53866396 53866445 -66417867 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 995 684 134 5 32 chr13 53866547 53866732 -66417580 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 995 441 0 0 0 chr13 53866870 53866919 -66417393 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 995 314 23 23 0 chr13 53866985 53867028 -66417284 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 995 876 19 0 0 chr13 53867028 53867132 -66417180 - B1_Mus2 SINE Alu -13 134 31 6 995 1490 237 71 19 chr13 53868219 53868644 -66415668 - RCHARR1 DNA MER1_type -61 913 467 6 995 456 299 32 58 chr13 53868638 53868826 -66415486 - ID_B1 SINE B4 -4 220 38 6 995 930 321 107 43 chr13 53868842 53869310 -66415002 - RCHARR1 DNA MER1_type -475 499 2 6 995 875 236 113 14 chr13 53869774 53870066 -66414246 + Lx8 LINE L1 7149 7469 -4 6 995 284 246 51 80 chr13 53870225 53870362 -66413950 - MLT1A0 LTR MaLR -214 151 19 6 995 237 294 0 0 chr13 53870488 53870539 -66413773 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 996 296 238 75 0 chr13 53870821 53870901 -66413411 - MER5A DNA MER1_type -58 131 46 6 996 338 16 63 32 chr13 53871032 53871095 -66413217 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 6 996 771 303 77 36 chr13 53872396 53872759 -66411553 - MTEa LTR MaLR 0 379 2 6 996 1707 204 89 22 chr13 53875082 53875434 -66408878 - MTD LTR MaLR -21 398 19 6 996 414 0 0 0 chr13 53875434 53875480 -66408832 + (CAAAA)n Simple_repeat Simple_repeat 5 50 0 6 996 1707 204 89 22 chr13 53875480 53875498 -66408814 - MTD LTR MaLR -401 18 3 6 996 793 269 61 14 chr13 53875907 53876186 -66408126 + B4A SINE B4 1 292 0 6 996 446 270 0 6 chr13 53876186 53876365 -66407947 + (CA)n Simple_repeat Simple_repeat 1 178 0 6 996 248 290 43 11 chr13 53876873 53876967 -66407345 + MTEa LTR MaLR 283 379 0 6 996 345 305 82 30 chr13 53876998 53877133 -66407179 + MER2B DNA MER2_type 195 336 0 6 996 767 208 81 6 chr13 53879132 53879292 -66405020 - B3 SINE B2 -43 173 2 6 996 324 258 156 55 chr13 53879462 53879624 -66404688 - L2a LINE L2 -14 3412 3199 6 996 289 333 79 37 chr13 53879920 53880110 -66404202 - MIRb SINE MIR -32 236 39 6 996 1265 268 34 40 chr13 53880810 53881281 -66403031 + L1MA5 LINE L1 5657 6124 -176 6 996 294 164 28 56 chr13 53881411 53881482 -66402830 + MurSatRep1 Unknown Unknown 620 688 -1449 6 996 23 0 0 0 chr13 53881535 53881558 -66402754 + AT_rich Low_complexity Low_complexity 1 23 0 6 996 390 101 0 0 chr13 53881784 53881853 -66402459 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 6 996 2448 194 121 18 chr13 53881853 53882399 -66401913 + RMER19A LTR ERVK 82 683 -54 6 996 329 275 89 69 chr13 53882668 53882914 -66401398 - L1MA8 LINE L1 -53 6238 5988 6 996 538 220 122 39 chr13 53882959 53883139 -66401173 + MLT1B LTR MaLR 155 349 -41 6 996 207 133 0 0 chr13 53884576 53884621 -66399691 + (T)n Simple_repeat Simple_repeat 1 45 0 6 996 194 381 50 25 chr13 53884736 53884895 -66399417 + MIRb SINE MIR 21 183 -85 6 996 965 192 36 55 chr13 53884895 53885115 -66399197 + B3 SINE B2 1 216 0 6 996 3469 18 8 0 chr13 53885458 53885851 -66398461 - MTA_Mm LTR MaLR 0 396 1 6 996 9304 35 3 5 chr13 53885851 53886952 -66397360 - MTA_Mm-int LTR MaLR 0 1098 1 6 996 3397 35 5 0 chr13 53886952 53887346 -66396966 - MTA_Mm LTR MaLR 0 396 1 6 996 643 248 21 14 chr13 53887865 53888008 -66396304 - B1_Mur2 SINE Alu -5 144 1 6 996 181 315 0 0 chr13 53889061 53889115 -66395197 + L3 LINE CR1 3164 3217 -1272 6 996 600 82 57 29 chr13 53890045 53890220 -66394092 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 996 296 182 43 52 chr13 53890228 53890344 -66393968 + (CACAC)n Simple_repeat Simple_repeat 1 115 0 6 996 342 0 0 0 chr13 53890345 53890383 -66393929 + (TC)n Simple_repeat Simple_repeat 1 38 0 6 996 720 71 0 0 chr13 53890383 53890481 -66393831 + (CA)n Simple_repeat Simple_repeat 1 99 0 6 996 333 0 0 0 chr13 53891119 53891156 -66393156 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 6 996 268 364 54 57 chr13 53891262 53891597 -66392715 + L2a LINE L2 3088 3421 -5 6 996 3368 52 0 0 chr13 53892064 53892464 -66391848 + MTB LTR MaLR 1 400 0 6 996 289 234 73 21 chr13 53892756 53892852 -66391460 + RSINE1 SINE B4 5 105 -60 6 996 235 158 0 0 chr13 53892856 53892894 -66391418 + RSINE1 SINE B4 85 122 -43 6 996 185 294 73 0 chr13 53893382 53893450 -66390862 - L2b LINE L2 -163 3212 3140 6 996 879 213 6 34 chr13 53893728 53893903 -66390409 + B3A SINE B2 2 171 -27 6 996 1111 37 0 0 chr13 53894808 53894942 -66389370 - B1_Mus2 SINE Alu -1 146 13 6 996 2717 274 142 16 chr13 53895042 53896051 -66388261 + Lx8 LINE L1 6088 7223 -250 6 996 312 130 0 0 chr13 53896089 53896135 -66388177 + Lx8 LINE L1 7146 7191 -282 6 996 581 288 0 70 chr13 53897733 53897872 -66386440 + RSINE1 SINE B4 20 148 -17 6 996 522 0 0 0 chr13 53897872 53897930 -66386382 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 996 581 288 0 70 chr13 53897930 53897947 -66386365 + RSINE1 SINE B4 149 165 0 6 996 1406 181 98 2 chr13 53897984 53898294 -66386018 + MTD LTR MaLR 13 348 -73 6 996 364 250 65 0 chr13 53898247 53898339 -66385973 - B3 SINE B2 -4 212 115 6 996 3078 67 23 3 chr13 53898421 53898813 -66385499 - MTB LTR MaLR 0 400 1 6 996 2960 180 26 12 chr13 53900140 53900709 -66383603 - RLTR20B3 LTR ERVK 0 577 1 6 996 754 201 262 57 chr13 53902578 53902918 -66381394 + MTD LTR MaLR 11 419 0 6 996 301 347 161 11 chr13 53904475 53904749 -66379563 + Kanga1 DNA Tc2 1347 1661 -84 6 996 383 92 15 0 chr13 53904959 53905024 -66379288 + (TG)n Simple_repeat Simple_repeat 1 66 0 6 996 573 349 29 102 chr13 53905027 53905140 -66379172 - B4A SINE B4 0 292 182 7 996 1087 74 15 0 chr13 53905140 53905275 -66379037 + B1_Mus2 SINE Alu 1 137 -10 7 996 198 0 0 0 chr13 53905275 53905297 -66379015 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 7 996 573 349 29 102 chr13 53905297 53905418 -66378894 - B4A SINE B4 -111 181 68 7 996 1470 64 16 5 chr13 53905418 53905607 -66378705 - B2_Mm2 SINE B2 -2 193 3 7 996 573 349 29 102 chr13 53905607 53905683 -66378629 - B4A SINE B4 -225 67 4 7 996 370 309 104 50 chr13 53905721 53906000 -66378312 - L1MEg LINE L1 -4212 1796 1503 7 996 305 159 0 16 chr13 53906056 53906120 -66378192 + CT-rich Low_complexity Low_complexity 2 64 0 7 996 415 337 63 57 chr13 53906143 53906535 -66377777 - L1MEg LINE L1 -4559 1449 1040 7 996 477 288 53 33 chr13 53906575 53906726 -66377586 + MTEa LTR MaLR 1 154 -225 7 996 365 335 27 133 chr13 53906726 53906981 -66377331 + MT2A LTR ERVL 1 363 -170 7 996 493 276 112 0 chr13 53906953 53907087 -66377225 - MTEa LTR MaLR -224 155 7 7 996 1772 284 140 13 chr13 53907098 53907647 -66376665 - MTEa-int LTR MaLR -5 1575 956 7 996 1402 258 82 13 chr13 53907647 53908039 -66376273 + MTD LTR MaLR 1 419 0 7 996 2166 273 63 55 chr13 53908049 53908793 -66375519 - MTEa-int LTR MaLR -628 952 203 7 996 427 280 85 51 chr13 53908776 53908953 -66375359 - MTE2a LTR MaLR -178 201 19 7 996 1936 184 119 67 chr13 53910202 53910698 -66373614 - RLTR28 LTR ERVL 0 524 3 7 996 663 202 70 11 chr13 53910702 53910887 -66373425 + L1MA6 LINE L1 6105 6300 0 7 996 231 310 174 39 chr13 53911135 53911313 -66372999 + L2c LINE L2 3180 3381 -6 7 996 180 300 0 41 chr13 53911504 53911577 -66372735 - L3 LINE CR1 -2158 2331 2262 7 996 462 18 0 0 chr13 53911782 53911837 -66372475 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 7 996 182 368 58 7 chr13 53912093 53912230 -66372082 + MIRc SINE MIR 12 155 -113 7 996 354 98 0 0 chr13 53913078 53913129 -66371183 + (TGG)n Simple_repeat Simple_repeat 1 51 0 7 996 844 169 147 5 chr13 53913193 53913377 -66370935 - B3 SINE B2 -2 214 5 7 996 687 236 71 25 chr13 53914356 53914552 -66369760 - MTE2b LTR MaLR -164 215 11 7 996 923 287 87 73 chr13 53915017 53915581 -66368731 + L1MB2 LINE L1 5527 6098 -73 7 996 650 237 123 59 chr13 53915568 53915812 -66368500 - L1_Mur3 LINE L1 -4187 1693 1429 7 996 3386 37 15 12 chr13 53915812 53916218 -66368094 + MTB_Mm LTR MaLR 1 407 0 7 996 650 237 123 59 chr13 53916218 53916395 -66367917 - L1_Mur3 LINE L1 -4452 1428 1245 7 996 258 32 0 0 chr13 53916965 53916996 -66367316 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 7 996 622 271 39 45 chr13 53918104 53918390 -66365922 - L1_Mur3 LINE L1 -1902 3978 3695 7 996 333 302 113 16 chr13 53918381 53918566 -66365746 - Lx8 LINE L1 -2 7471 7269 7 996 429 288 145 10 chr13 53918594 53918676 -66365636 - L1M2 LINE L1 -2392 3751 3667 7 996 396 0 0 0 chr13 53918676 53918720 -66365592 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 996 429 288 145 10 chr13 53918720 53918844 -66365468 - L1M2 LINE L1 -2477 3666 3517 7 996 242 308 81 115 chr13 53918845 53919054 -66365258 - B3 SINE B2 -5 211 10 7 996 643 266 13 31 chr13 53918900 53919059 -66365253 - RSINE1 SINE B4 -4 161 6 7 996 566 242 127 25 chr13 53919119 53919334 -66364978 + Lx7 LINE L1 5538 5806 -1191 7 996 300 278 0 11 chr13 53919475 53919566 -66364746 - MER53 DNA hAT -102 91 2 7 996 4039 239 125 20 chr13 53920025 53921172 -66363140 + Lx6 LINE L1 5782 7048 -412 7 996 643 263 26 63 chr13 53921174 53921442 -66362870 + RLTR15 LTR ERVK 1 258 -101 7 996 1392 219 78 9 chr13 53921865 53922196 -66362116 + Lx6 LINE L1 7089 7442 -18 7 996 1285 188 15 37 chr13 53922225 53922496 -66361816 - Lx4B LINE L1 -4 7054 6790 7 996 352 352 90 27 chr13 53922739 53922961 -66361351 + L1MCa LINE L1 508 743 -6008 7 996 395 314 91 56 chr13 53922982 53923612 -66360700 + L1MCa LINE L1 526 1177 -4868 7 996 765 84 0 0 chr13 53923701 53923820 -66360492 + (GA)n Simple_repeat Simple_repeat 1 119 0 7 996 440 293 26 26 chr13 53923964 53924157 -66360155 + L1MCa LINE L1 1616 1808 -4943 7 996 1432 138 95 52 chr13 53924160 53924465 -66359847 - L1_Mur2 LINE L1 -1566 4311 3994 7 996 401 223 45 23 chr13 53924459 53924576 -66359736 + Lx4B LINE L1 6918 7038 -20 7 996 279 71 0 0 chr13 53924576 53924618 -66359694 + (TTAA)n Simple_repeat Simple_repeat 1 42 0 7 996 401 223 45 23 chr13 53924618 53924633 -66359679 + Lx4B LINE L1 7039 7053 -5 7 996 228 228 203 39 chr13 53924661 53924789 -66359523 + Lx8 LINE L1 7296 7444 -29 7 996 500 310 75 13 chr13 53924833 53925271 -66359041 + L1MCa LINE L1 1863 2365 -4386 7 996 315 327 9 0 chr13 53925974 53926087 -66358225 + PB1D10 SINE Alu 1 114 -3 7 996 341 231 77 0 chr13 53926277 53926368 -66357944 - ORR1D1 LTR MaLR -253 121 24 7 996 662 110 0 39 chr13 53926957 53927061 -66357251 + MTC LTR MaLR 1 100 -321 7 996 641 267 117 64 chr13 53927070 53927258 -66357054 - B3A SINE B2 0 198 1 7 996 263 281 67 0 chr13 53927790 53927879 -66356433 + L1MD1 LINE L1 5926 6020 -222 7 996 378 0 0 0 chr13 53927883 53927925 -66356387 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 996 1960 126 186 25 chr13 53928047 53928445 -66355867 + RMER17B LTR ERVK 1 462 -444 7 996 216 0 0 0 chr13 53928452 53928476 -66355836 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 7 996 8734 71 2 1 chr13 53928505 53930401 -66353911 - L1_Mus1 LINE L1 -1 6653 4676 7 996 2695 162 70 6 chr13 53930401 53930938 -66353374 + RMER17B LTR ERVK 399 958 0 7 996 232 221 43 14 chr13 53930941 53931010 -66353302 + L1MD2 LINE L1 6287 6357 -2 7 996 207 0 0 0 chr13 53931539 53931562 -66352750 + (TG)n Simple_repeat Simple_repeat 1 23 0 7 996 918 117 0 0 chr13 53931580 53931759 -66352553 + (GA)n Simple_repeat Simple_repeat 2 180 0 7 996 473 237 31 78 chr13 53931920 53932048 -66352264 - B4 SINE B4 -167 125 4 7 996 213 297 141 49 chr13 53932157 53932320 -66351992 + MIRb SINE MIR 53 230 -38 7 996 342 107 0 0 chr13 53932466 53932522 -66351790 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 996 492 248 48 41 chr13 53932950 53933097 -66351215 + MLT1B LTR MaLR 3 150 -240 7 996 329 355 22 10 chr13 53933476 53933624 -66350688 - MIRb SINE MIR -112 156 4 7 996 1279 243 66 10 chr13 53933811 53934114 -66350198 + MTD LTR MaLR 100 419 0 7 996 782 326 35 21 chr13 53934134 53934416 -66349896 - RMER15 LTR ERVL -14 561 276 7 996 309 360 43 12 chr13 53934987 53935150 -66349162 + MIR SINE MIR 31 198 -64 7 996 964 206 80 0 chr13 53935319 53935518 -66348794 - B3 SINE B2 0 216 2 7 996 354 306 9 26 chr13 53935782 53935829 -66348483 + ID_B1 SINE B4 64 171 -49 7 996 363 206 0 0 chr13 53935829 53935892 -66348420 + PB1D10 SINE Alu 28 90 -27 7 996 750 43 0 0 chr13 53935897 53935991 -66348321 + (TC)n Simple_repeat Simple_repeat 1 94 0 7 996 180 0 0 0 chr13 53935991 53936010 -66348302 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 996 1179 35 0 0 chr13 53937344 53937485 -66346827 + B1_Mus1 SINE Alu 8 148 0 7 996 285 29 0 0 chr13 53937572 53937606 -66346706 + (GA)n Simple_repeat Simple_repeat 2 35 0 7 996 894 288 56 91 chr13 53938566 53939102 -66345210 + L1M2 LINE L1 3581 4097 -2046 7 996 647 300 81 12 chr13 53939159 53939405 -66344907 + RMER5 LTR ERV1 33 295 -239 7 996 393 346 11 6 chr13 53939493 53939697 -66344615 + (TGGA)n Simple_repeat Simple_repeat 1 205 0 7 996 536 65 13 0 chr13 53939763 53939840 -66344472 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 7 996 219 314 49 33 chr13 53941999 53942121 -66342191 + MIRb SINE MIR 77 200 -68 7 996 228 35 0 0 chr13 53942244 53942273 -66342039 + (T)n Simple_repeat Simple_repeat 1 29 0 7 996 223 301 82 0 chr13 53942275 53942348 -66341964 + MIRc SINE MIR 115 193 -75 7 996 294 312 0 0 chr13 53942352 53942432 -66341880 + (CAATG)n Simple_repeat Simple_repeat 3 82 0 7 996 255 79 0 0 chr13 53942606 53942644 -66341668 + (TTTTTG)n Simple_repeat Simple_repeat 4 41 0 7 996 449 246 17 34 chr13 53942768 53942886 -66341426 - MER21-int LTR ERV1 -891 3300 3185 7 996 4518 14 0 0 chr13 53942945 53943438 -66340874 - MT2_Mm LTR ERVL 0 493 1 7 996 891 75 20 0 chr13 53944464 53944610 -66339702 + (CA)n Simple_repeat Simple_repeat 2 150 0 7 996 200 350 60 0 chr13 53945321 53945421 -66338891 + MIRb SINE MIR 114 219 -49 7 996 234 322 11 11 chr13 53946089 53946180 -66338132 - MER2 DNA MER2_type -51 294 204 7 996 1823 300 72 42 chr13 53946549 53947125 -66337187 + Lx8 LINE L1 6231 6811 -662 7 996 3332 40 2 5 chr13 53947125 53947522 -66336790 - MTA_Mm LTR MaLR 0 396 1 7 996 1823 300 72 42 chr13 53947522 53947760 -66336552 + Lx8 LINE L1 6812 7070 -403 7 996 390 21 0 0 chr13 53947842 53947889 -66336423 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 996 225 0 0 0 chr13 53947889 53947914 -66336398 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 996 504 195 0 0 chr13 53947914 53948073 -66336239 + CT-rich Low_complexity Low_complexity 2 160 0 7 996 209 339 129 0 chr13 53948391 53948515 -66335797 + MIRb SINE MIR 117 256 -12 7 996 28 0 0 0 chr13 53948899 53948927 -66335385 + AT_rich Low_complexity Low_complexity 1 28 0 7 996 297 0 0 0 chr13 53949413 53949446 -66334866 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 996 525 342 3 56 chr13 53950036 53950342 -66333970 - L1MD2 LINE L1 -373 5986 5697 7 996 1697 124 179 14 chr13 53950788 53950955 -66333357 + RMER17C LTR ERVK 2 182 -228 7 996 342 0 0 0 chr13 53950955 53950993 -66333319 + (TCC)n Simple_repeat Simple_repeat 3 40 0 7 996 606 28 0 0 chr13 53950995 53951067 -66333245 + (TC)n Simple_repeat Simple_repeat 1 72 0 7 996 1697 124 179 14 chr13 53951067 53951247 -66333065 + RMER17C LTR ERVK 183 406 -4 7 996 579 259 31 0 chr13 53952018 53952180 -66332132 - Lx4B LINE L1 -5 7053 6887 7 996 1182 289 65 19 chr13 53952201 53952681 -66331631 - RMER5 LTR ERV1 0 534 33 7 996 438 69 0 0 chr13 53953587 53953645 -66330667 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 996 252 86 0 0 chr13 53953921 53953956 -66330356 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 7 996 963 159 0 0 chr13 53954672 53954842 -66329470 + CT-rich Low_complexity Low_complexity 2 171 0 7 996 194 246 0 16 chr13 53954838 53954900 -66329412 + T-rich Low_complexity Low_complexity 3 63 0 7 996 449 304 53 32 chr13 53954945 53955135 -66329177 + Lx8 LINE L1 6953 7146 -327 8 996 1040 251 9 5 chr13 53955148 53955360 -66328952 - B3 SINE B2 -3 213 1 8 996 6415 91 1 2 chr13 53955533 53956411 -66327901 - L1_Mus1 LINE L1 0 6567 5689 8 996 320 331 47 8 chr13 53956416 53956544 -66327768 + MLT1B LTR MaLR 1 133 -257 8 996 287 297 134 41 chr13 53956543 53956715 -66327597 + MLT1B-int LTR MaLR 513 700 -671 8 996 294 304 72 0 chr13 53957098 53957236 -66327076 + MLT1B-int LTR MaLR 1223 1370 -1 8 996 375 301 43 13 chr13 53957240 53957437 -66326875 + MLT1B LTR MaLR 3 209 -258 8 996 409 282 97 32 chr13 53958017 53958325 -66325987 + Lx9 LINE L1 7314 7641 -3 8 996 49 32 0 0 chr13 53958325 53958388 -66325924 + AT_rich Low_complexity Low_complexity 1 63 0 8 996 215 136 0 43 chr13 53958667 53958713 -66325599 + (CATATA)n Simple_repeat Simple_repeat 5 48 0 8 996 1188 69 0 0 chr13 53958958 53959118 -66325194 + B2_Mm2 SINE B2 1 160 -35 8 996 234 0 0 0 chr13 53959120 53959146 -66325166 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 8 996 3283 162 75 96 chr13 53959808 53960559 -66323753 + RMER19B LTR ERVK 7 741 -161 8 996 243 250 92 20 chr13 53961487 53961585 -66322727 + MLT1A0 LTR MaLR 27 131 -234 8 996 225 250 0 0 chr13 53961821 53961869 -66322443 + ORR1B2 LTR MaLR 1 48 -311 8 996 838 246 96 0 chr13 53961872 53962092 -66322220 - ORR1D2 LTR MaLR -8 362 122 8 996 247 239 99 0 chr13 53962632 53962703 -66321609 + ID4 SINE ID 3 80 -3 8 996 1848 169 88 0 chr13 53964142 53964504 -66319808 - MTD LTR MaLR -14 405 20 8 996 773 186 112 10 chr13 53965201 53965254 -66319058 - B3 SINE B2 0 216 153 8 996 404 118 15 0 chr13 53965254 53965322 -66318990 + (TG)n Simple_repeat Simple_repeat 2 70 0 8 996 773 186 112 10 chr13 53965322 53965464 -66318848 - B3 SINE B2 -64 152 2 8 996 1771 164 29 32 chr13 53965483 53965823 -66318489 + ORR1B2 LTR MaLR 24 362 -5 8 996 2579 129 138 201 chr13 53966779 53967586 -66316726 + RMER6A LTR ERVK 1 756 0 8 996 2910 40 0 0 chr13 53968224 53968597 -66315715 - IAPEY_LTR LTR ERVK 0 385 13 8 996 339 222 14 0 chr13 53970132 53970204 -66314108 - RMER10B LTR ERVL -57 341 269 8 996 724 247 60 11 chr13 53971615 53971799 -66312513 + B3A SINE B2 1 193 -5 8 996 405 0 0 0 chr13 53971979 53972024 -66312288 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 996 216 86 0 0 chr13 53972294 53972329 -66311983 + (TCTCTG)n Simple_repeat Simple_repeat 6 40 0 8 996 1018 200 10 15 chr13 53972708 53972906 -66311406 - B3 SINE B2 -15 201 5 8 996 1444 201 44 83 chr13 53973567 53974001 -66310311 + Lx7 LINE L1 7276 7692 -4 8 996 1065 178 48 101 chr13 53974055 53974472 -66309840 + ORR1D1 LTR MaLR 21 384 0 8 996 2496 95 3 0 chr13 53975376 53975702 -66308610 + ORR1A2 LTR MaLR 1 327 0 8 996 186 317 96 77 chr13 53976256 53976516 -66307796 - L2b LINE L2 -35 3340 3076 8 996 32 0 0 0 chr13 53976833 53976865 -66307447 + AT_rich Low_complexity Low_complexity 1 32 0 8 996 243 0 0 0 chr13 53976876 53976903 -66307409 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 996 313 355 38 86 chr13 53978108 53978398 -66305914 + B4A SINE B4 7 282 -10 8 996 245 234 0 0 chr13 53978368 53978415 -66305897 + RSINE1 SINE B4 108 154 -11 8 996 432 0 0 0 chr13 53978434 53978482 -66305830 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 996 411 21 0 0 chr13 53979017 53979065 -66305247 + (CAGA)n Simple_repeat Simple_repeat 2 49 0 8 996 191 227 15 0 chr13 53979373 53979439 -66304873 + CT-rich Low_complexity Low_complexity 2 68 0 8 996 180 0 0 0 chr13 53979563 53979583 -66304729 + (T)n Simple_repeat Simple_repeat 1 20 0 8 996 249 111 0 0 chr13 53979970 53980006 -66304306 + RSINE1 SINE B4 79 114 -51 8 996 252 77 0 0 chr13 53980006 53980045 -66304267 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 996 216 0 0 0 chr13 53980111 53980135 -66304177 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 996 211 372 0 11 chr13 53980177 53980272 -66304040 - MIRb SINE MIR -88 180 87 8 996 977 233 61 15 chr13 53980710 53980972 -66303340 + MTEb LTR MaLR 17 290 -89 8 996 644 129 17 17 chr13 53983214 53983332 -66300980 + RMER6B LTR ERVK 344 461 0 8 996 768 210 0 3 chr13 53983434 53983749 -66300563 + (TCCA)n Simple_repeat Simple_repeat 1 313 0 8 996 775 281 73 46 chr13 53984519 53984847 -66299465 - RMER15 LTR ERVL -12 563 227 8 996 257 286 12 0 chr13 53985574 53985658 -66298654 + CT-rich Low_complexity Low_complexity 2 86 0 8 996 840 169 0 21 chr13 53985665 53985810 -66298502 - B1_Mur4 SINE Alu -5 145 4 8 996 900 284 119 6 chr13 53986246 53986600 -66297712 + Lx8 LINE L1 6958 7351 -122 8 996 1209 66 16 42 chr13 53987730 53987885 -66296427 + B2_Mm2 SINE B2 1 155 -40 8 996 2262 118 81 13 chr13 53987885 53988280 -66296032 - BGLII_Mus LTR ERVK 0 422 1 8 996 1209 66 16 42 chr13 53988280 53988314 -66295998 + B2_Mm2 SINE B2 156 185 -10 8 996 315 0 0 0 chr13 53988605 53988640 -66295672 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 996 863 217 69 29 chr13 53988698 53988902 -66295410 + B3 SINE B2 1 212 -4 8 996 1531 200 66 47 chr13 53989132 53989584 -66294728 - RMER6B LTR ERVK 0 461 1 8 996 6938 115 67 35 chr13 53989584 53990285 -66294027 - MYSERV6-int LTR ERVK -1 8958 8215 8 996 3261 74 0 12 chr13 53990285 53990695 -66293617 - MTB_Mm LTR MaLR 0 407 3 8 996 6938 115 67 35 chr13 53990695 53991183 -66293129 - MYSERV6-int LTR ERVK -745 8214 7731 8 996 6244 111 33 68 chr13 53991179 53992296 -66292016 - MYSERV6-int LTR ERVK -1536 7423 6346 8 996 283 191 0 0 chr13 53992296 53992343 -66291969 - B1_Mus1 SINE Alu -87 61 15 8 996 285 200 183 0 chr13 53992399 53992459 -66291853 - B1_Mur4 SINE Alu -79 71 1 8 996 1169 106 11 11 chr13 53992459 53992641 -66291671 - MYSERV6-int LTR ERVK -3965 4994 4813 8 996 1038 241 82 50 chr13 53992693 53993095 -66291217 - RMER6B LTR ERVK -39 422 8 8 996 358 326 86 0 chr13 53994513 53994746 -66289566 - L1MA5 LINE L1 -70 6230 5978 8 996 24 67 0 0 chr13 53994753 53994798 -66289514 + AT_rich Low_complexity Low_complexity 1 45 0 8 996 22 0 0 0 chr13 53994870 53994892 -66289420 + AT_rich Low_complexity Low_complexity 1 22 0 8 996 274 116 88 7 chr13 53994903 53995051 -66289261 + (TA)n Simple_repeat Simple_repeat 1 160 0 8 996 234 0 0 0 chr13 53995052 53995078 -66289234 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 996 225 0 0 0 chr13 53995213 53995238 -66289074 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 996 562 225 0 8 chr13 53995238 53995359 -66288953 - Lx9 LINE L1 -182 7462 7343 8 996 288 70 0 0 chr13 53996502 53996545 -66287767 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 8 996 225 245 0 0 chr13 53997022 53997075 -66287237 + (TGGA)n Simple_repeat Simple_repeat 4 56 0 8 996 567 92 0 0 chr13 53997095 53997182 -66287130 + (TGGA)n Simple_repeat Simple_repeat 3 89 0 8 996 1095 102 41 56 chr13 53997215 53997412 -66286900 + B2_Mm2 SINE B2 1 194 -1 8 996 209 229 24 0 chr13 53997422 53997505 -66286807 + (TGGA)n Simple_repeat Simple_repeat 3 87 0 8 996 325 267 116 0 chr13 53997772 53997858 -66286454 + RSINE1 SINE B4 45 140 -25 8 996 452 32 0 16 chr13 53997860 53997923 -66286389 + (CA)n Simple_repeat Simple_repeat 2 63 0 8 996 302 214 0 28 chr13 54000282 54000354 -66283958 + Lx8 LINE L1 7403 7472 -1 1 996 414 296 28 105 chr13 54000853 54001164 -66283148 - L1M2 LINE L1 -1876 4264 3971 2 996 723 278 18 1 chr13 54001252 54001460 -66282852 - L1_Mur3 LINE L1 -1936 3944 3732 3 996 297 109 0 0 chr13 54001594 54001640 -66282672 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 997 23 54 0 0 chr13 54001896 54001933 -66282379 + AT_rich Low_complexity Low_complexity 1 37 0 5 997 5393 72 17 7 chr13 54002270 54003015 -66281297 - MusHAL1 LINE L1 -761 1951 1199 6 997 950 261 29 40 chr13 54002989 54003264 -66281048 - Lx8 LINE L1 -668 6805 6534 7 997 214 319 115 25 chr13 54003722 54003844 -66280468 - MIRb SINE MIR -112 156 24 8 997 994 43 14 0 chr13 54004897 54005037 -66279275 + (TG)n Simple_repeat Simple_repeat 2 143 0 9 997 188 300 54 32 chr13 54005110 54005203 -66279109 - MIRb SINE MIR -129 139 45 1 997 1833 199 52 19 chr13 54005911 54006368 -66277944 - RMER19B LTR ERVK -350 387 1 1 997 1676 226 57 66 chr13 54007129 54007536 -66276776 - Lx5 LINE L1 0 7050 6648 1 997 879 269 76 22 chr13 54007528 54007896 -66276416 - L1MA5 LINE L1 -1 6299 5912 1 997 1775 223 50 31 chr13 54010739 54011216 -66273096 - RMER19C LTR ERVK 0 611 126 1 997 1015 229 94 69 chr13 54011823 54011898 -66272414 - ORR1D2 LTR MaLR 0 370 301 1 997 1148 96 0 0 chr13 54011898 54012044 -66272268 + B1_Mus2 SINE Alu 2 147 0 1 997 1015 229 94 69 chr13 54012044 54012329 -66271983 - ORR1D2 LTR MaLR -70 300 1 1 997 3633 152 29 5 chr13 54012329 54012552 -66271760 - ORR1D2-int LTR MaLR 0 1509 1287 1 997 342 0 0 0 chr13 54012552 54012590 -66271722 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 997 3633 153 30 5 chr13 54012590 54013013 -66271299 - ORR1D2-int LTR MaLR -223 1286 848 1 997 287 35 70 0 chr13 54013013 54013070 -66271242 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 997 2742 221 102 42 chr13 54013070 54014212 -66270100 - ORR1B1-int LTR MaLR -588 1375 76 1 997 521 62 0 0 chr13 54014219 54014300 -66270012 + MTB_Mm LTR MaLR 223 303 -104 2 997 228 86 0 0 chr13 54014497 54014532 -66269780 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 2 997 351 44 0 0 chr13 54014533 54014578 -66269734 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 997 615 112 0 0 chr13 54014578 54014694 -66269618 + (TC)n Simple_repeat Simple_repeat 2 117 0 2 997 269 267 55 11 chr13 54016823 54016914 -66267398 + MER57A-int LTR ERV1 5798 5892 -295 2 997 953 222 9 32 chr13 54017893 54018112 -66266200 + B3 SINE B2 2 215 -1 2 997 411 21 0 0 chr13 54019700 54019748 -66264564 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 997 188 0 74 0 chr13 54021073 54021100 -66263212 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 2 997 1677 159 148 12 chr13 54021104 54021442 -66262870 + ORR1C2 LTR MaLR 1 384 0 2 997 380 321 48 30 chr13 54022465 54022632 -66261680 - RMER15 LTR ERVL -5 570 401 2 997 297 291 188 8 chr13 54022603 54022731 -66261581 - RMER5 LTR ERV1 -351 183 33 3 997 276 30 0 0 chr13 54022763 54022796 -66261516 + (TC)n Simple_repeat Simple_repeat 1 33 0 3 997 404 269 106 15 chr13 54022796 54022928 -66261384 - HAL1-3A_ME LINE L1 -740 2118 1975 3 997 592 321 58 25 chr13 54022976 54023219 -66261093 - B4A SINE B4 -16 276 26 3 997 585 0 0 0 chr13 54024499 54024564 -66259748 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 997 225 291 187 26 chr13 54025295 54025450 -66258862 - L2 LINE L2 -541 2878 2699 3 997 1106 72 20 0 chr13 54025673 54025826 -66258486 + B2_Mm2 SINE B2 2 157 -38 3 997 405 0 0 0 chr13 54025826 54025871 -66258441 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 997 647 25 0 12 chr13 54025871 54025953 -66258359 + (GAAAA)n Simple_repeat Simple_repeat 5 85 0 3 997 489 322 60 29 chr13 54025980 54026261 -66258051 + MLT1C LTR MaLR 146 435 -32 3 997 772 253 11 0 chr13 54026261 54026443 -66257869 + MTEb LTR MaLR 1 184 -195 4 997 843 260 81 4 chr13 54026450 54026697 -66257615 + B4 SINE B4 21 286 -6 4 997 441 36 0 0 chr13 54026744 54026799 -66257513 + (GA)n Simple_repeat Simple_repeat 1 55 0 4 997 711 260 45 0 chr13 54026804 54026981 -66257331 + MTEb LTR MaLR 195 379 0 4 997 236 211 14 0 chr13 54027356 54027427 -66256885 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 997 630 228 20 14 chr13 54027485 54027842 -66256470 + (TG)n Simple_repeat Simple_repeat 1 359 0 4 997 347 279 55 0 chr13 54027898 54028042 -66256270 - L1M2 LINE L1 -395 5776 5611 4 997 264 271 14 0 chr13 54028035 54028105 -66256207 + L1_Rod LINE L1 5147 5217 -630 4 997 363 105 0 0 chr13 54028840 54028897 -66255415 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 997 200 279 8 0 chr13 54028897 54029019 -66255293 + (CA)n Simple_repeat Simple_repeat 1 123 0 4 997 611 292 78 19 chr13 54029053 54029311 -66255001 - Tigger7 DNA MER2_type 0 2491 2219 4 997 276 275 149 8 chr13 54029979 54030100 -66254212 + MLT1I LTR MaLR 40 177 -234 4 997 237 229 171 0 chr13 54030214 54030284 -66254028 + MLT1I LTR MaLR 322 403 -8 4 997 223 397 21 14 chr13 54031043 54031186 -66253126 + MER5B DNA MER1_type 22 165 -13 5 997 198 0 0 0 chr13 54031381 54031403 -66252909 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 997 1105 295 83 20 chr13 54032953 54033879 -66250433 + L1M2 LINE L1 4561 5634 -669 5 997 662 288 70 0 chr13 54033881 54034110 -66250202 + MTE2b LTR MaLR 1 245 -134 5 997 354 45 0 0 chr13 54034155 54034199 -66250113 + (TCTG)n Simple_repeat Simple_repeat 1 44 0 5 997 367 374 7 7 chr13 54034203 54034351 -66249961 - RSINE1 SINE B4 -15 150 3 5 997 486 263 0 17 chr13 54034361 54034481 -66249831 + RSINE1 SINE B4 35 152 -13 5 997 31 68 0 0 chr13 54034654 54034713 -66249599 + AT_rich Low_complexity Low_complexity 1 59 0 5 997 180 0 0 0 chr13 54034902 54034922 -66249390 + (TGG)n Simple_repeat Simple_repeat 3 22 0 5 997 623 164 112 0 chr13 54034929 54035045 -66249267 - B1_Mur4 SINE Alu -20 130 2 5 997 1182 41 0 26 chr13 54035173 54035324 -66248988 + B1_Mm SINE Alu 1 147 0 6 997 358 282 137 30 chr13 54035372 54035737 -66248575 + L1M4 LINE L1 3331 3734 -2412 6 997 3493 27 5 12 chr13 54035862 54036272 -66248040 - MTB_Mm LTR MaLR 0 407 1 6 997 308 345 76 16 chr13 54036398 54036648 -66247664 + LTR16C LTR ERVL 191 455 -34 6 997 539 118 82 0 chr13 54038934 54039069 -66245243 + GA-rich Low_complexity Low_complexity 2 147 0 6 997 629 331 90 34 chr13 54039584 54040047 -66244265 + MLT1E1A LTR MaLR 157 676 -4 6 997 315 343 107 37 chr13 54041199 54041499 -66242813 + MLT1I LTR MaLR 72 392 -19 6 997 530 231 30 8 chr13 54041795 54041926 -66242386 - B1_Mur1 SINE Alu -6 143 10 6 997 261 83 0 0 chr13 54043447 54043483 -66240829 + (CAGA)n Simple_repeat Simple_repeat 1 36 0 6 997 468 0 0 0 chr13 54044018 54044070 -66240242 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 997 378 0 0 0 chr13 54044070 54044111 -66240201 + (CA)n Simple_repeat Simple_repeat 1 42 0 7 997 784 111 45 13 chr13 54044132 54044287 -66240025 - RLTR10 LTR ERVK -4 386 227 7 997 235 125 0 35 chr13 54044298 54044356 -66239956 - RLTR10 LTR ERVK -72 318 263 7 997 2394 38 0 18 chr13 54044356 54044682 -66239630 - RLTR10 LTR ERVK -70 320 1 7 997 17086 23 7 4 chr13 54044682 54046622 -66237690 - RLTR10-int LTR ERVK -1 1986 41 7 997 784 111 45 13 chr13 54046638 54046793 -66237519 - RLTR10 LTR ERVK -4 386 227 7 997 235 125 0 35 chr13 54046804 54046862 -66237450 - RLTR10 LTR ERVK -72 318 263 7 997 2394 38 0 18 chr13 54046862 54047188 -66237124 - RLTR10 LTR ERVK -70 320 1 7 997 1068 244 4 68 chr13 54047537 54047818 -66236494 + Lx5 LINE L1 6771 7033 -17 7 997 189 0 0 0 chr13 54047823 54047844 -66236468 + (TTAA)n Simple_repeat Simple_repeat 1 21 0 7 997 25 0 0 0 chr13 54048290 54048315 -66235997 + AT_rich Low_complexity Low_complexity 1 25 0 7 997 342 0 0 0 chr13 54048433 54048471 -66235841 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 997 387 0 0 0 chr13 54048471 54048513 -66235799 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 997 257 296 102 0 chr13 54048533 54048631 -66235681 + RMER10A LTR ERVL 310 417 -25 8 997 359 204 0 127 chr13 54048705 54048823 -66235489 + MT2B LTR ERVL 154 256 -345 8 997 883 106 0 8 chr13 54048730 54048863 -66235449 + B1_Mur3 SINE Alu 12 143 -6 8 997 723 169 14 14 chr13 54048997 54049277 -66235035 + (CATA)n Simple_repeat Simple_repeat 1 280 0 8 997 308 172 15 17 chr13 54049759 54049843 -66234469 + MIRc SINE MIR 58 140 -128 8 997 221 280 0 0 chr13 54050329 54050379 -66233933 - MIR3 SINE MIR -48 160 111 8 997 3243 34 36 8 chr13 54050747 54051136 -66233176 + MTB LTR MaLR 1 400 0 8 997 3223 244 84 84 chr13 54052131 54052596 -66231716 - L1Md_T LINE L1 0 7061 6529 8 997 651 264 14 0 chr13 54052596 54052744 -66231568 - RSINE1 SINE B4 -13 152 3 8 997 32914 38 0 3 chr13 54052744 54059040 -66225272 - L1Md_T LINE L1 0 6585 221 8 997 348 183 0 0 chr13 54059519 54059587 -66224725 + T-rich Low_complexity Low_complexity 53 120 0 9 997 225 0 0 0 chr13 54059587 54059612 -66224700 + (TGG)n Simple_repeat Simple_repeat 1 25 0 9 997 348 183 0 0 chr13 54059612 54059663 -66224649 + T-rich Low_complexity Low_complexity 2 52 0 9 997 843 83 8 0 chr13 54059665 54059785 -66224527 - B1_Mus2 SINE Alu 0 147 27 9 997 242 311 78 0 chr13 54060572 54060662 -66223650 - RSINE1 SINE B4 -67 98 2 9 997 612 338 84 18 chr13 54060735 54061565 -66222747 - L1M2 LINE L1 -3177 2963 2039 9 997 597 119 17 17 chr13 54061565 54061685 -66222627 + CT-rich Low_complexity Low_complexity 3 122 0 9 997 200 348 12 35 chr13 54061931 54062101 -66222211 + (CA)n Simple_repeat Simple_repeat 1 166 0 9 997 366 331 23 57 chr13 54062701 54062877 -66221435 - MER5B DNA MER1_type 0 178 9 9 997 338 188 121 30 chr13 54063015 54063114 -66221198 - MER5A DNA MER1_type -80 109 2 9 997 754 213 7 0 chr13 54063515 54063651 -66220661 + B1_Mur1 SINE Alu 2 138 -11 1 997 830 189 6 0 chr13 54063651 54063826 -66220486 + GA-rich Low_complexity Low_complexity 5 180 0 1 997 2364 88 3 6 chr13 54064018 54064351 -66219961 - IAPLTR1a_Mm LTR ERVK -5 332 1 1 997 414 0 0 0 chr13 54065299 54065345 -66218967 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 997 23 0 0 0 chr13 54065415 54065438 -66218874 + AT_rich Low_complexity Low_complexity 1 23 0 1 997 609 202 9 17 chr13 54066040 54066156 -66218156 + B1_Mur1 SINE Alu 28 142 -7 1 997 459 0 0 0 chr13 54066157 54066208 -66218104 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 997 184 297 20 147 chr13 54066274 54066424 -66217888 - L2c LINE L2 -5 3382 3252 1 997 2179 149 30 63 chr13 54067185 54067580 -66216732 + ORR1C2 LTR MaLR 3 384 0 1 997 346 190 290 0 chr13 54067888 54067988 -66216324 + MLT1A0 LTR MaLR 23 151 -214 1 997 317 0 70 0 chr13 54068139 54068182 -66216130 + (GTTTG)n Simple_repeat Simple_repeat 2 47 0 1 997 1079 215 57 37 chr13 54068192 54068438 -66215874 - MTEa LTR MaLR -128 251 1 1 997 613 277 37 5 chr13 54068440 54068620 -66215692 - MTEa-int LTR MaLR -2 1578 1361 1 997 2876 67 11 3 chr13 54068631 54068991 -66215321 + L1Md_T LINE L1 6220 6582 0 1 997 210 71 0 0 chr13 54069593 54069621 -66214691 + (A)n Simple_repeat Simple_repeat 1 28 0 1 997 298 304 33 0 chr13 54069625 54069717 -66214595 - L1_Mur2 LINE L1 -2047 3830 3736 1 997 306 325 0 0 chr13 54070048 54070125 -66214187 + MER2B DNA MER2_type 1 77 -259 1 997 412 261 106 19 chr13 54070165 54070325 -66213987 + MER2 DNA MER2_type 150 323 -22 1 997 256 226 146 121 chr13 54071130 54071212 -66213100 + MLT1B LTR MaLR 57 144 -246 1 997 8640 26 0 3 chr13 54071212 54072142 -66212170 + RLTR13B3 LTR ERVK 3 929 0 1 997 256 226 146 121 chr13 54072142 54072265 -66212047 + MLT1B LTR MaLR 145 267 -123 1 997 476 269 29 7 chr13 54072256 54072396 -66211916 + MLT1B LTR MaLR 194 413 -54 1 997 270 0 0 0 chr13 54072543 54072573 -66211739 + (A)n Simple_repeat Simple_repeat 1 30 0 1 997 180 111 0 0 chr13 54072588 54072615 -66211697 + (ATGGTG)n Simple_repeat Simple_repeat 1 27 0 1 997 300 164 0 0 chr13 54072615 54072682 -66211630 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 997 333 0 0 0 chr13 54072684 54072721 -66211591 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 997 513 0 0 0 chr13 54073382 54073439 -66210873 + (GAAA)n Simple_repeat Simple_repeat 4 60 0 1 997 774 84 0 0 chr13 54073439 54073546 -66210766 + (GGGA)n Simple_repeat Simple_repeat 3 109 0 1 997 276 282 27 18 chr13 54073617 54073729 -66210583 - LTR48 LTR ERV1 -214 573 461 1 997 862 246 65 16 chr13 54073902 54073957 -66210355 - RLTR15 LTR ERVK -23 336 271 1 997 186 43 0 0 chr13 54073957 54073980 -66210332 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 997 862 246 65 16 chr13 54073980 54074230 -66210082 - RLTR15 LTR ERVK -89 270 17 1 997 261 0 0 0 chr13 54074232 54074261 -66210051 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 997 512 130 0 20 chr13 54074261 54074363 -66209949 + (CATATA)n Simple_repeat Simple_repeat 2 101 0 1 997 373 188 44 20 chr13 54075100 54075205 -66209107 - MTD LTR MaLR -14 405 294 1 997 316 237 0 49 chr13 54075250 54075392 -66208920 + T-rich Low_complexity Low_complexity 5 139 0 1 997 926 288 57 38 chr13 54075394 54075900 -66208412 - L1M2 LINE L1 -2884 3259 2744 1 997 2607 278 83 12 chr13 54075912 54076732 -66207580 + Lx8 LINE L1 6320 7197 -276 1 997 495 0 0 0 chr13 54076888 54076943 -66207369 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 997 637 301 117 40 chr13 54077010 54077566 -66206746 + HAL1 LINE L1 1170 1768 -739 1 997 1264 202 2 14 chr13 54078005 54078255 -66206057 + Lx5 LINE L1 6626 6847 -203 1 997 207 0 0 0 chr13 54078271 54078294 -66206018 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 1 997 907 195 0 13 chr13 54078319 54078470 -66205842 + B1_Mur1 SINE Alu 1 149 0 1 997 268 320 48 39 chr13 54078670 54078774 -66205538 - PB1D10 SINE Alu -12 105 1 1 997 188 384 76 48 chr13 54079112 54079402 -66204910 + L2a LINE L2 2920 3217 -209 1 997 7499 32 0 0 chr13 54079422 54080246 -66204066 - L1Md_T LINE L1 0 6582 5759 1 997 450 278 35 23 chr13 54080581 54080754 -66203558 + Lx7 LINE L1 7151 7325 -371 1 997 285 247 12 0 chr13 54080781 54080866 -66203446 + T-rich Low_complexity Low_complexity 5 90 0 1 997 33 43 0 0 chr13 54080932 54080979 -66203333 + AT_rich Low_complexity Low_complexity 1 47 0 1 997 732 159 17 0 chr13 54081324 54081500 -66202812 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 997 251 198 32 42 chr13 54081510 54081605 -66202707 + (CACCC)n Simple_repeat Simple_repeat 1 94 0 1 997 207 203 172 0 chr13 54081986 54082050 -66202262 - MIRb SINE MIR -56 212 138 1 997 193 370 83 42 chr13 54082108 54082204 -66202108 + MIRm SINE MIR 29 128 -148 1 997 235 290 50 61 chr13 54082213 54082312 -66202000 + MER3 DNA MER1_type 5 102 -107 1 997 1233 271 38 112 chr13 54082285 54082519 -66201793 + RMER19C LTR ERVK 232 576 -326 1 997 1477 55 66 0 chr13 54082519 54082700 -66201612 + B2_Mm2 SINE B2 2 194 -1 1 997 1233 255 26 126 chr13 54082700 54082713 -66201599 + RMER19C LTR ERVK 298 298 -313 1 997 756 61 0 0 chr13 54082713 54082811 -66201501 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 1 997 1233 255 26 126 chr13 54082811 54083150 -66201162 + RMER19C LTR ERVK 298 611 0 1 997 718 188 36 0 chr13 54083151 54083289 -66201023 + ORR1D2 LTR MaLR 228 370 0 1 997 525 315 14 0 chr13 54083635 54083781 -66200531 - RSINE1 SINE B4 -17 148 1 1 997 421 246 46 31 chr13 54083781 54083909 -66200403 + Charlie12 DNA MER1_type 2385 2514 -359 1 997 432 237 0 0 chr13 54083898 54083991 -66200321 + Charlie12 DNA MER1_type 2778 2870 -3 1 997 314 244 67 34 chr13 54084015 54084104 -66200208 + MER2B DNA MER2_type 222 313 -23 1 997 862 280 44 124 chr13 54084505 54084892 -66199420 - MTE2a LTR MaLR -5 374 19 1 997 226 239 22 0 chr13 54084911 54084957 -66199355 + L4 LINE RTE 1783 1829 -200 1 997 578 304 112 22 chr13 54085026 54085339 -66198973 + MLT1A0 LTR MaLR 25 365 0 1 997 568 317 124 0 chr13 54085543 54085849 -66198463 - L1MA9 LINE L1 -272 6040 5697 1 997 256 355 18 35 chr13 54085884 54085998 -66198314 - RMER10B LTR ERVL -30 368 257 1 997 32 0 0 0 chr13 54086892 54086924 -66197388 + AT_rich Low_complexity Low_complexity 1 32 0 1 997 1100 209 10 19 chr13 54087077 54087282 -66197030 + B3 SINE B2 1 203 -13 1 997 990 167 0 0 chr13 54087287 54087467 -66196845 + GA-rich Low_complexity Low_complexity 1 180 0 1 997 504 0 0 0 chr13 54087729 54087785 -66196527 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 997 423 0 0 0 chr13 54087785 54087831 -66196481 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 997 435 38 0 0 chr13 54088210 54088263 -66196049 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 997 392 209 29 11 chr13 54089483 54089657 -66194655 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 997 449 157 26 9 chr13 54089707 54089823 -66194489 + (CA)n Simple_repeat Simple_repeat 2 119 0 1 997 609 175 174 8 chr13 54090448 54090558 -66193754 + B1_Mur4 SINE Alu 9 139 -11 1 997 221 0 0 33 chr13 54090558 54090588 -66193724 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 997 222 118 0 0 chr13 54090994 54091028 -66193284 + (CAT)n Simple_repeat Simple_repeat 3 36 0 1 997 831 171 0 16 chr13 54091045 54091290 -66193022 + (CAT)n Simple_repeat Simple_repeat 1 240 0 1 997 9018 270 25 30 chr13 54091295 54094134 -66190178 - MYSERV6-int LTR ERVK -5765 3194 368 1 997 475 294 38 49 chr13 54094170 54094497 -66189815 - MYSERV6-int LTR ERVK -8562 397 2 1 997 276 30 0 0 chr13 54094976 54095009 -66189303 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 997 333 0 0 0 chr13 54095009 54095045 -66189267 + (TA)n Simple_repeat Simple_repeat 2 38 0 1 997 16645 50 3 1 chr13 54095053 54097775 -66186537 - L1Md_F2 LINE L1 -13 6569 3841 1 997 4215 78 0 5 chr13 54097774 54098342 -66185970 + L1Md_F2 LINE L1 3296 3860 -2023 1 997 1051 226 35 46 chr13 54098477 54098772 -66185540 - RLTR15 LTR ERVK -16 343 53 1 997 333 0 0 0 chr13 54098772 54098809 -66185503 + (TTG)n Simple_repeat Simple_repeat 2 38 0 1 997 1051 226 35 46 chr13 54098809 54098860 -66185452 - RLTR15 LTR ERVK -307 52 2 1 997 667 221 33 16 chr13 54098957 54099141 -66185171 + Lx8 LINE L1 5725 5911 -1562 1 997 2216 303 68 38 chr13 54099178 54100124 -66184188 + Lx8 LINE L1 6095 7068 -405 1 997 886 75 0 0 chr13 54100240 54100360 -66183952 + B1_Mus2 SINE Alu 26 145 -2 1 997 333 0 0 0 chr13 54100360 54100397 -66183915 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1 997 373 267 34 82 chr13 54100422 54100569 -66183743 + ORR1D2 LTR MaLR 177 316 -54 1 997 351 63 104 35 chr13 54100582 54100697 -66183615 + (GTTTG)n Simple_repeat Simple_repeat 2 124 0 1 997 538 298 90 37 chr13 54100783 54100971 -66183341 + MTE-int LTR MaLR 14 211 -1369 1 997 293 261 274 0 chr13 54100990 54101143 -66183169 + L1MDa LINE L1 1775 1969 -4664 1 997 351 241 102 99 chr13 54101126 54101508 -66182804 + L1MDa LINE L1 4877 5259 -1278 1 997 647 280 138 24 chr13 54101665 54101961 -66182351 - MER2 DNA MER2_type -6 339 10 1 997 666 0 0 0 chr13 54102059 54102133 -66182179 + (GGGA)n Simple_repeat Simple_repeat 1 74 0 1 997 1082 294 78 43 chr13 54102133 54102649 -66181663 + Tigger13a DNA MER2_type 86 619 -152 1 997 855 269 18 0 chr13 54102798 54103021 -66181291 - MER2 DNA MER2_type -23 322 96 1 997 1589 313 35 53 chr13 54104371 54105428 -66178884 - L1_Rod LINE L1 -3649 2198 1161 1 997 1570 120 0 26 chr13 54105591 54105822 -66178490 - URR1A DNA MER1_type 0 226 2 1 997 583 146 145 7 chr13 54107541 54107693 -66176619 - Lx9 LINE L1 -2 7642 7470 1 997 281 316 103 21 chr13 54107702 54107896 -66176416 - L1MD LINE L1 -2163 3983 3774 1 997 201 86 28 28 chr13 54107941 54107977 -66176335 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 1 997 469 234 101 7 chr13 54108495 54108633 -66175679 - MLT1D LTR MaLR -7 498 348 1 997 336 183 14 14 chr13 54108710 54108782 -66175530 + Ricksha DNA MuDR 117 188 -3058 1 997 287 274 0 16 chr13 54108880 54108943 -66175369 + tRNA-Ala-GCG tRNA tRNA 5 66 -9 1 997 279 315 0 14 chr13 54108943 54108954 -66175358 + ID4_ SINE ID 11 83 0 1 997 1266 264 32 9 chr13 54109002 54109350 -66174962 - Lx9 LINE L1 -706 6938 6583 1 997 1060 286 55 17 chr13 54109387 54109735 -66174577 + Ricksha DNA MuDR 1979 2339 -907 1 997 326 239 0 15 chr13 54109887 54109955 -66174357 + Ricksha DNA MuDR 2502 2568 -678 1 997 842 282 125 7 chr13 54110053 54110342 -66173970 + Ricksha DNA MuDR 2703 3025 -221 1 997 5392 278 35 64 chr13 54110976 54113230 -66171082 + L1_Mur3 LINE L1 1220 3446 -2434 1 997 1110 88 7 0 chr13 54113230 54113377 -66170935 + B1_Mus1 SINE Alu 1 148 0 2 997 5392 278 35 64 chr13 54113377 54113622 -66170690 + L1_Mur3 LINE L1 3447 3648 -2232 1 997 1526 301 157 31 chr13 54113645 54114390 -66169922 + Lx9 LINE L1 6381 7219 -425 2 997 498 185 235 61 chr13 54114397 54114505 -66169807 + Lx7 LINE L1 7437 7571 -125 2 997 378 0 0 0 chr13 54114505 54114547 -66169765 + (GA)n Simple_repeat Simple_repeat 1 42 0 2 997 498 185 235 61 chr13 54114547 54114651 -66169661 + Lx7 LINE L1 7572 7685 -11 2 997 1185 62 0 0 chr13 54114651 54114797 -66169515 + B1_Mus1 SINE Alu 2 147 -1 2 997 499 359 4 0 chr13 54114841 54115072 -66169240 + Lx9 LINE L1 7225 7456 -188 2 997 1536 32 9 2 chr13 54115073 54115941 -66168371 + (TG)n Simple_repeat Simple_repeat 1 874 0 2 997 271 257 68 19 chr13 54116207 54116310 -66168002 + L1_Mur3 LINE L1 3638 3745 -2135 1 997 987 150 5 0 chr13 54116313 54116529 -66167783 + (TG)n Simple_repeat Simple_repeat 1 217 0 2 997 1537 218 113 22 chr13 54116536 54117039 -66167273 + L1_Mur3 LINE L1 3747 4295 -1585 1 997 656 315 76 1 chr13 54117561 54117881 -66166431 + L1_Mur3 LINE L1 4308 4639 -1501 1 997 1697 175 29 9 chr13 54118197 54118542 -66165770 - ORR1B1 LTR MaLR -2 392 41 2 997 226 345 36 0 chr13 54118633 54118717 -66165595 + MLT1H2 LTR MaLR 68 154 -335 2 997 295 312 91 38 chr13 54119000 54119340 -66164972 - L1M7 LINE L1 -4318 1900 1543 2 997 210 37 0 0 chr13 54119372 54119399 -66164913 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2 997 254 29 29 0 chr13 54119679 54119714 -66164598 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2 997 1932 172 9 9 chr13 54119819 54120165 -66164147 + ORR1B1 LTR MaLR 41 386 -8 2 997 2309 92 3 71 chr13 54120766 54121117 -66163195 - ORR1A2 LTR MaLR 0 327 1 2 997 319 279 36 79 chr13 54121944 54122084 -66162228 + MIRb SINE MIR 13 146 -122 2 997 696 294 19 95 chr13 54122993 54123309 -66161003 + B4 SINE B4 1 292 0 2 997 3808 32 5 0 chr13 54123701 54124135 -66160177 - RLTR10C LTR ERVK 0 436 1 2 997 485 256 162 6 chr13 54124621 54124846 -66159466 + MLT1A0 LTR MaLR 87 367 -7 2 997 273 247 21 0 chr13 54125067 54125160 -66159152 + (TA)n Simple_repeat Simple_repeat 2 96 0 2 997 244 222 16 16 chr13 54127406 54127470 -66156842 + C-rich Low_complexity Low_complexity 6 69 0 2 997 4277 172 86 25 chr13 54127792 54128542 -66155770 + Lx7 LINE L1 6743 7505 -191 2 997 216 0 0 0 chr13 54128542 54128566 -66155746 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 997 4277 172 86 25 chr13 54128566 54128714 -66155598 + Lx7 LINE L1 7506 7695 -1 2 997 281 306 163 0 chr13 54128861 54129106 -66155206 + L1MC3 LINE L1 3143 3427 -2719 2 997 189 0 0 0 chr13 54129398 54129419 -66154893 + (TC)n Simple_repeat Simple_repeat 1 21 0 2 997 405 0 0 0 chr13 54129419 54129463 -66154849 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 997 701 283 103 37 chr13 54129611 54130096 -66154216 + L1MC3 LINE L1 3712 4228 -1918 2 997 301 279 197 55 chr13 54130119 54130373 -66153939 + B4A SINE B4 3 292 0 2 997 201 242 0 40 chr13 54130387 54130486 -66153826 + (CATA)n Simple_repeat Simple_repeat 4 98 0 2 997 1052 57 0 14 chr13 54130558 54130701 -66153611 - B1_Mus1 SINE Alu 0 148 8 2 997 225 261 50 0 chr13 54130600 54130719 -66153593 - ORR1B1-int LTR MaLR -755 754 630 2 997 207 0 0 0 chr13 54130760 54130783 -66153529 + (A)n Simple_repeat Simple_repeat 1 23 0 2 997 591 301 85 79 chr13 54130783 54131060 -66153252 + L1MC3 LINE L1 4619 4897 -1249 2 997 905 203 65 10 chr13 54131060 54131259 -66153053 - B3 SINE B2 -5 211 2 2 997 591 301 85 79 chr13 54131259 54131501 -66152811 + L1MC3 LINE L1 4898 5141 -1005 2 997 331 256 139 0 chr13 54131502 54131588 -66152724 + B4A SINE B4 2 99 -193 2 997 1592 63 67 8 chr13 54131588 54131828 -66152484 - Lx3_Mus LINE L1 -682 6327 6074 2 997 5165 71 8 0 chr13 54131832 54132495 -66151817 + Lx3_Mus LINE L1 6342 7009 0 2 997 403 343 66 5 chr13 54132511 54132722 -66151590 + B4A SINE B4 69 292 0 2 998 751 274 19 9 chr13 54132868 54133082 -66151230 + B3 SINE B2 1 216 0 2 998 1458 308 136 46 chr13 54133181 54133629 -66150683 + L1MC3 LINE L1 5424 5876 -1909 2 998 3563 34 0 0 chr13 54133629 54134036 -66150276 - MTB_Mm LTR MaLR 0 407 1 2 998 1458 308 136 46 chr13 54134036 54134178 -66150134 + L1MC3 LINE L1 5877 6018 -1767 2 998 667 207 207 0 chr13 54134178 54134342 -66149970 - B3 SINE B2 -18 198 1 2 998 1458 308 136 46 chr13 54134342 54135233 -66149079 + L1MC3 LINE L1 6019 7039 -746 2 998 764 130 7 12 chr13 54135307 54135453 -66148859 + B2_Mm2 SINE B2 1 152 -41 2 998 243 0 0 0 chr13 54135453 54135480 -66148832 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 2 998 663 196 47 37 chr13 54135480 54135524 -66148788 + B2_Mm1t SINE B2 153 193 0 2 998 495 332 120 15 chr13 54135560 54135951 -66148361 + L1MC3 LINE L1 7219 7650 -135 2 998 240 233 50 0 chr13 54137251 54137311 -66147001 + ORR1E LTR MaLR 1 63 -296 2 998 517 142 71 48 chr13 54137315 54137441 -66146871 + Lx9 LINE L1 7494 7622 -22 2 998 459 229 170 5 chr13 54137458 54137663 -66146649 + ORR1E LTR MaLR 95 356 -23 2 998 441 0 0 0 chr13 54137826 54137875 -66146437 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 998 254 259 37 12 chr13 54137875 54137957 -66146355 + LTR48B LTR ERV1 561 644 0 2 998 567 0 0 0 chr13 54138747 54138810 -66145502 + (TC)n Simple_repeat Simple_repeat 1 63 0 2 998 217 119 0 67 chr13 54139600 54139645 -66144667 + C-rich Low_complexity Low_complexity 6 47 0 2 998 1113 203 5 5 chr13 54140267 54140490 -66143822 - URR1B DNA MER1_type 0 225 3 2 998 369 0 0 0 chr13 54140791 54140832 -66143480 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 998 746 257 120 49 chr13 54141013 54141205 -66143107 + B4 SINE B4 8 209 -83 2 998 252 0 0 0 chr13 54141205 54141233 -66143079 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 2 998 746 257 120 49 chr13 54141233 54141306 -66143006 + B4 SINE B4 210 292 0 2 998 640 293 16 11 chr13 54141363 54141553 -66142759 + B4A SINE B4 1 191 -101 2 998 727 131 66 0 chr13 54141743 54141865 -66142447 + B3 SINE B2 2 131 -85 2 998 240 277 25 15 chr13 54142089 54142200 -66142112 - L2c LINE L2 -264 3111 2998 2 998 956 295 74 44 chr13 54142753 54143250 -66141062 + L1MA4 LINE L1 5416 5927 -373 2 998 3359 64 0 0 chr13 54143279 54143686 -66140626 - MTB_Mm LTR MaLR 0 407 1 2 998 342 0 0 0 chr13 54147725 54147763 -66136549 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2 998 27 0 0 0 chr13 54148004 54148031 -66136281 + AT_rich Low_complexity Low_complexity 1 27 0 2 998 288 0 0 0 chr13 54151475 54151507 -66132805 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 998 270 0 0 0 chr13 54151944 54151974 -66132338 + (A)n Simple_repeat Simple_repeat 1 30 0 2 998 713 125 160 0 chr13 54152227 54152371 -66131941 - URR1A DNA MER1_type -2 224 58 2 998 586 291 47 16 chr13 54154444 54154636 -66129676 - L1MEc LINE L1 -5671 729 532 2 998 397 184 0 28 chr13 54154743 54154849 -66129463 + CT-rich Low_complexity Low_complexity 1 103 0 2 998 384 324 0 0 chr13 54155265 54155370 -66128942 - RSINE1 SINE B4 -58 107 3 2 998 756 300 46 25 chr13 54156104 54156384 -66127928 + ORR1E LTR MaLR 73 358 -1 2 998 1735 111 11 120 chr13 54156388 54156745 -66127567 + ORR1A3 LTR MaLR 1 318 -8 2 998 287 269 80 48 chr13 54157245 54157370 -66126942 + L1MB3 LINE L1 6054 6182 -1 2 998 500 161 97 0 chr13 54157371 54157464 -66126848 + B1_Mus2 SINE Alu 45 146 -1 2 998 324 0 0 0 chr13 54159001 54159037 -66125275 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 998 362 259 19 0 chr13 54160053 54160161 -66124151 - B1F2 SINE Alu -9 140 31 2 998 1172 186 30 47 chr13 54161290 54161628 -66122684 + RLTR15 LTR ERVK 3 334 -25 2 998 298 308 0 41 chr13 54161720 54161842 -66122470 + MER102a DNA MER1_type 75 191 -139 2 998 929 88 65 14 chr13 54162339 54162478 -66121834 - B1_Mm SINE Alu 0 147 2 2 998 1638 133 179 0 chr13 54163564 54163843 -66120469 + ORR1A4 LTR MaLR 1 329 0 2 998 317 278 80 29 chr13 54164246 54164383 -66119929 + MLT1H LTR MaLR 58 201 -348 2 998 270 0 0 0 chr13 54164842 54164872 -66119440 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 998 423 0 0 0 chr13 54164872 54164918 -66119394 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 998 2491 130 14 46 chr13 54164953 54165388 -66118924 - MTC LTR MaLR 0 421 1 2 998 760 204 0 7 chr13 54165764 54165912 -66118400 - MTE2b LTR MaLR 0 379 233 2 998 1539 68 5 0 chr13 54166710 54166902 -66117410 + B2_Mm1a SINE B2 1 193 0 2 998 219 114 0 0 chr13 54166917 54166952 -66117360 + (A)n Simple_repeat Simple_repeat 1 35 0 2 998 26 0 0 0 chr13 54167213 54167239 -66117073 + GC_rich Low_complexity Low_complexity 1 26 0 2 998 282 282 17 35 chr13 54167865 54167987 -66116325 - MIR SINE MIR -35 173 54 2 998 771 131 71 14 chr13 54168183 54168323 -66115989 + URR1A DNA MER1_type 79 226 0 2 998 423 0 0 0 chr13 54168836 54168883 -66115429 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 998 414 0 0 0 chr13 54168895 54168941 -66115371 + (TAG)n Simple_repeat Simple_repeat 2 47 0 2 998 592 262 95 53 chr13 54168941 54169110 -66115202 - B3A SINE B2 -22 176 1 2 998 739 92 132 16 chr13 54169313 54169434 -66114878 + B1_Mm SINE Alu 11 145 -2 2 998 535 200 0 0 chr13 54169608 54169693 -66114619 - BC1_Mm scRNA scRNA -67 85 1 2 998 2289 92 9 0 chr13 54170743 54171059 -66113253 - ORR1A2 LTR MaLR -8 319 1 2 998 185 277 0 21 chr13 54171177 54171225 -66113087 - MIRb SINE MIR -183 85 39 2 998 988 99 43 0 chr13 54172146 54172287 -66112025 - B1_Mus1 SINE Alu 0 148 2 2 998 267 299 130 9 chr13 54172744 54172852 -66111460 + RSINE1 SINE B4 1 121 -44 2 998 213 121 0 0 chr13 54172865 54172898 -66111414 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 998 2459 199 29 46 chr13 54172954 54173475 -66110837 - RLTR18B LTR ERVK 0 512 1 2 998 423 244 12 0 chr13 54173475 54173561 -66110751 + B3A SINE B2 33 119 -79 2 998 369 0 0 0 chr13 54173725 54173766 -66110546 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 2 998 203 29 0 81 chr13 54175126 54175163 -66109149 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 998 325 226 65 0 chr13 54175442 54175535 -66108777 - MLT1D LTR MaLR -2 503 405 2 998 213 353 67 0 chr13 54176289 54176408 -66107904 + MIR3 SINE MIR 59 185 -23 2 998 1010 82 8 0 chr13 54176514 54176648 -66107664 + B1_Mus1 SINE Alu 14 148 0 2 998 257 94 0 36 chr13 54176648 54176703 -66107609 + (CAAA)n Simple_repeat Simple_repeat 4 56 0 2 998 1538 72 0 0 chr13 54177024 54177217 -66107095 - B2_Mm1t SINE B2 0 193 1 2 998 240 35 0 0 chr13 54177402 54177431 -66106881 + (CGA)n Simple_repeat Simple_repeat 3 31 0 3 998 755 240 162 50 chr13 54177701 54177960 -66106352 + MER44A DNA MER2_type 41 328 -11 3 998 751 258 183 15 chr13 54178249 54178583 -66105729 - LTR65 LTR ERV1 -267 402 13 3 998 282 270 236 96 chr13 54179013 54179284 -66105028 + Lx8 LINE L1 6993 7301 -172 3 998 255 262 70 16 chr13 54179298 54179426 -66104886 + Lx9 LINE L1 7458 7592 -52 3 998 26 30 0 0 chr13 54179462 54179495 -66104817 + AT_rich Low_complexity Low_complexity 1 33 0 3 998 381 248 98 62 chr13 54180076 54180188 -66104124 - B4A SINE B4 -30 262 147 3 998 256 181 116 35 chr13 54180445 54180515 -66103797 - RMER30 DNA MER1_type -24 178 99 3 998 225 0 0 0 chr13 54180515 54180540 -66103772 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 998 256 181 116 35 chr13 54180540 54180555 -66103757 - RMER30 DNA MER1_type -104 98 86 3 998 251 319 106 32 chr13 54180609 54180732 -66103580 - RSINE1 SINE B4 -17 148 17 3 998 588 299 80 9 chr13 54181504 54181717 -66102595 + MER2 DNA MER2_type 1 228 -117 3 998 439 292 35 0 chr13 54181717 54181830 -66102482 + PB1 SINE Alu 4 120 -7 3 998 813 233 71 20 chr13 54181980 54182177 -66102135 + B3 SINE B2 1 207 -9 3 998 236 341 158 0 chr13 54183286 54183368 -66100944 - MLT1D LTR MaLR -132 373 279 3 998 269 292 0 0 chr13 54184025 54184097 -66100215 + ID4_ SINE ID 3 74 -9 3 998 502 292 68 0 chr13 54184629 54184776 -66099536 + RSINE1 SINE B4 3 159 -6 3 998 27 49 0 0 chr13 54184776 54184817 -66099495 + AT_rich Low_complexity Low_complexity 1 41 0 3 998 329 244 97 43 chr13 54184858 54184976 -66099336 + PB1D7 SINE Alu 14 128 -21 3 998 271 221 56 42 chr13 54185104 54185175 -66099137 + B1F SINE Alu 3 74 -75 3 998 902 192 62 33 chr13 54185279 54185489 -66098823 + B3 SINE B2 1 216 0 3 998 1226 41 7 0 chr13 54185578 54185724 -66098588 + B1_Mus1 SINE Alu 2 148 0 3 998 228 67 0 0 chr13 54185724 54185754 -66098558 + (GGAA)n Simple_repeat Simple_repeat 3 32 0 3 998 219 69 0 0 chr13 54185969 54185998 -66098314 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 3 998 1956 166 80 8 chr13 54186028 54186393 -66097919 + MTD LTR MaLR 18 408 -11 3 998 374 260 106 0 chr13 54190695 54190799 -66093513 + MER2 DNA MER2_type 93 207 -138 3 998 248 284 12 87 chr13 54191385 54191488 -66092824 - MIRm SINE MIR -96 172 80 3 998 524 239 109 88 chr13 54191652 54191845 -66092467 - B3A SINE B2 -1 197 1 3 998 240 35 0 0 chr13 54192216 54192245 -66092067 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 3 998 849 175 7 7 chr13 54192252 54192396 -66091916 - B1_Mur4 SINE Alu -6 144 1 3 998 1200 265 90 82 chr13 54193916 54194393 -66089919 + MER44B DNA MER2_type 37 517 -33 3 998 358 224 243 0 chr13 54194960 54195067 -66089245 + B3A SINE B2 2 134 -64 3 998 242 324 0 0 chr13 54195246 54195314 -66088998 + Tigger7 DNA MER2_type 42 109 -2382 3 998 211 248 159 108 chr13 54195847 54196023 -66088289 - B2_Mm2 SINE B2 -2 193 9 3 998 489 294 70 25 chr13 54195872 54196029 -66088283 - RSINE1 SINE B4 0 165 2 3 998 1224 254 145 20 chr13 54197496 54198034 -66086278 + L1ME1 LINE L1 5259 5862 -2133 3 998 524 289 30 23 chr13 54198078 54198209 -66086103 + ID_B1 SINE B4 85 216 -8 3 998 3365 43 13 0 chr13 54200364 54200759 -66083553 - MTB LTR MaLR 0 400 1 3 998 235 256 56 179 chr13 54203221 54203383 -66080929 + MLT2F LTR ERVL 288 429 -234 3 998 23 0 0 0 chr13 54203430 54203453 -66080859 + AT_rich Low_complexity Low_complexity 1 23 0 3 998 265 301 74 57 chr13 54203902 54204078 -66080234 - Tigger7 DNA MER2_type -32 2459 2281 3 998 263 160 0 0 chr13 54204070 54204120 -66080192 - Tigger7 DNA MER2_type -2373 118 69 3 998 1119 154 55 118 chr13 54204391 54204663 -66079649 + ORR1C1 LTR MaLR 1 255 -123 3 998 251 357 68 30 chr13 54205073 54205206 -66079106 - ORR1E LTR MaLR -216 143 6 3 998 230 222 0 0 chr13 54205224 54205278 -66079034 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 998 251 286 65 28 chr13 54205289 54205397 -66078915 + MIR SINE MIR 141 252 -10 3 998 3871 115 51 45 chr13 54205893 54206452 -66077860 - Lx4B LINE L1 -7 7051 6478 3 998 1185 69 0 0 chr13 54206452 54206597 -66077715 + B1_Mm SINE Alu 3 147 0 3 998 3871 115 51 45 chr13 54206597 54206681 -66077631 - Lx4B LINE L1 -581 6477 6404 3 998 938 291 25 11 chr13 54207591 54207872 -66076440 + B4A SINE B4 8 292 0 3 998 306 87 0 0 chr13 54207928 54207974 -66076338 + (GGGAGA)n Simple_repeat Simple_repeat 1 46 0 3 998 324 314 132 0 chr13 54208113 54208272 -66076040 + MER5A DNA MER1_type 10 189 0 3 998 224 336 123 7 chr13 54208279 54208417 -66075895 + MIRb SINE MIR 55 208 -60 3 998 235 353 118 0 chr13 54209021 54209089 -66075223 + PB1D9 SINE Alu 1 76 -44 3 998 714 220 82 38 chr13 54209096 54209280 -66075032 + B4 SINE B4 24 215 -77 3 998 236 189 0 19 chr13 54210549 54210603 -66073709 + (TGG)n Simple_repeat Simple_repeat 2 54 0 3 998 540 188 6 33 chr13 54210606 54210788 -66073524 + GA-rich Low_complexity Low_complexity 3 179 0 3 998 1185 68 0 7 chr13 54211709 54211857 -66072455 + B1_Mus2 SINE Alu 1 147 0 3 998 231 268 187 53 chr13 54212118 54212327 -66071985 - MLT1G1 LTR MaLR -1 578 342 3 998 915 286 28 12 chr13 54212707 54212958 -66071354 - RMER15-int LTR ERVL -331 4668 4414 3 998 327 175 183 24 chr13 54213227 54213309 -66071003 - RMER15-int LTR ERVL -2610 2389 2295 3 998 246 280 147 53 chr13 54213401 54213574 -66070738 + MIRb SINE MIR 30 237 -31 3 998 204 111 0 0 chr13 54214029 54214065 -66070247 + (T)n Simple_repeat Simple_repeat 1 36 0 3 998 742 289 37 12 chr13 54214563 54214805 -66069507 + RMER5 LTR ERV1 33 280 -254 3 998 1695 304 61 29 chr13 54214995 54216045 -66068267 - L1_Rod LINE L1 -3586 2261 1171 3 998 186 43 0 0 chr13 54216047 54216070 -66068242 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 998 299 201 129 158 chr13 54216302 54216473 -66067839 + RLTR24 LTR ERV1 289 454 -75 3 998 304 227 33 43 chr13 54217802 54217894 -66066418 + MURVY-int LTR ERV1 1210 1300 -6152 3 998 254 252 164 43 chr13 54218189 54218305 -66066007 + MuRRS-int LTR ERV1 1036 1165 -4152 3 998 318 26 0 0 chr13 54218400 54218439 -66065873 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 998 834 93 0 0 chr13 54218439 54218577 -66065735 + (GA)n Simple_repeat Simple_repeat 2 140 0 3 998 258 254 27 27 chr13 54218922 54218995 -66065317 + MuRRS-int LTR ERV1 2123 2195 -2495 3 998 600 302 101 50 chr13 54219234 54219691 -66064621 + MuRRS-int LTR ERV1 2459 2938 -4840 3 998 21 57 0 0 chr13 54220402 54220437 -66063875 + AT_rich Low_complexity Low_complexity 1 35 0 3 998 1130 78 0 0 chr13 54220491 54220632 -66063680 + B1_Mus1 SINE Alu 1 141 -7 3 998 243 326 45 0 chr13 54221208 54221297 -66063015 - MLT1A0 LTR MaLR -3 362 270 3 998 1319 85 17 0 chr13 54221839 54222015 -66062297 + B2_Mm2 SINE B2 3 181 -14 3 998 267 297 237 26 chr13 54222283 54222511 -66061801 + MER57C2 LTR ERV1 34 309 -125 3 998 315 270 72 7 chr13 54223864 54224002 -66060310 + L1M4 LINE L1 5019 5165 -981 3 998 519 196 0 21 chr13 54224020 54224114 -66060198 + PB1D10 SINE Alu 18 109 -8 3 998 596 50 12 0 chr13 54224655 54224735 -66059577 + (TC)n Simple_repeat Simple_repeat 1 81 0 3 998 444 246 112 0 chr13 54224753 54224932 -66059380 + L1M4 LINE L1 5156 5354 -792 3 998 457 306 98 83 chr13 54224972 54225432 -66058880 - RMER20B LTR ERVK -38 478 1 3 998 202 170 17 86 chr13 54225735 54225793 -66058519 + L2b LINE L2 3322 3375 0 3 998 1941 169 102 3 chr13 54225914 54226258 -66058054 - ORR1C1 LTR MaLR 0 378 1 3 998 195 42 0 0 chr13 54227405 54227429 -66056883 + (TCC)n Simple_repeat Simple_repeat 3 26 0 3 998 988 180 63 5 chr13 54227795 54227985 -66056327 - B3 SINE B2 -14 202 2 3 998 209 33 33 0 chr13 54228043 54228073 -66056239 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 998 3028 72 24 0 chr13 54228137 54228511 -66055801 + IAPEY_LTR LTR ERVK 3 385 0 3 998 196 133 92 0 chr13 54229181 54229301 -66055011 + (TA)n Simple_repeat Simple_repeat 1 131 0 3 998 477 200 3 20 chr13 54230462 54230821 -66053491 + (TG)n Simple_repeat Simple_repeat 1 352 0 3 998 305 109 0 21 chr13 54230834 54230881 -66053431 - HAL1-3A_ME LINE L1 -846 2012 1967 3 998 223 304 86 43 chr13 54231794 54231911 -66052401 + MIRb SINE MIR 13 134 -134 3 998 4500 144 36 9 chr13 54232097 54232866 -66051446 + RMER12 LTR ERVK 1 790 -532 3 998 719 235 57 71 chr13 54232850 54233061 -66051251 + RMER12 LTR ERVK 973 1180 -142 3 998 848 236 6 39 chr13 54233119 54233333 -66050979 + RMER12 LTR ERVK 1142 1322 0 3 998 308 236 0 0 chr13 54233403 54233458 -66050854 + U6 snRNA snRNA 53 107 0 3 998 361 132 0 68 chr13 54233482 54233555 -66050757 + Lx7 LINE L1 7621 7688 -8 3 998 1336 181 80 0 chr13 54233610 54233859 -66050453 + RMER1B Other Other 44 312 -754 3 998 2431 75 3 16 chr13 54233863 54234186 -66050126 - ORR1A2 LTR MaLR -8 319 1 3 998 320 79 61 45 chr13 54234188 54234254 -66050058 + RMER1B Other Other 310 376 -690 3 998 2750 162 7 57 chr13 54234258 54234692 -66049620 + RMER1B Other Other 537 956 -110 3 998 180 0 0 0 chr13 54234692 54234712 -66049600 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 998 2750 162 7 57 chr13 54234712 54234835 -66049477 + RMER1B Other Other 957 1066 0 3 998 209 160 40 0 chr13 54235476 54235526 -66048786 + (CAAA)n Simple_repeat Simple_repeat 3 54 0 3 998 889 275 75 9 chr13 54235846 54236142 -66048170 - MER2 DNA MER2_type -22 323 9 3 998 1262 92 49 0 chr13 54237346 54237530 -66046782 + B2_Mm2 SINE B2 1 193 -2 3 998 262 252 0 139 chr13 54237912 54237923 -66046389 + ID_B1 SINE B4 78 113 -111 3 998 468 138 0 20 chr13 54237923 54238011 -66046301 + B1_Mur4 SINE Alu 6 89 -61 3 998 262 252 0 139 chr13 54238011 54238027 -66046285 + ID_B1 SINE B4 114 176 -48 3 998 763 187 199 29 chr13 54238019 54238190 -66046122 + MTD LTR MaLR 208 407 -12 3 998 353 219 40 63 chr13 54238304 54238441 -66045871 + B1_Mur4 SINE Alu 11 150 0 3 998 206 136 0 22 chr13 54238441 54238486 -66045826 + GA-rich Low_complexity Low_complexity 1 44 0 4 998 373 336 54 35 chr13 54238945 54239204 -66045108 + L1ME4a LINE L1 5595 5858 -266 4 998 1619 205 129 39 chr13 54240823 54241068 -66043244 - MTD LTR MaLR 0 419 148 4 998 2254 138 55 0 chr13 54241068 54241430 -66042882 - ORR1C2 LTR MaLR 0 384 3 4 998 1619 205 129 39 chr13 54241430 54241565 -66042747 - MTD LTR MaLR -272 147 5 4 998 664 311 105 71 chr13 54241607 54242102 -66042210 - RMER20A LTR ERVK 0 516 5 4 998 1295 211 265 74 chr13 54242147 54242593 -66041719 - MT2A LTR ERVL -2 531 1 4 998 583 136 371 30 chr13 54242721 54242888 -66041424 + RMER4B LTR ERVK 33 256 -329 4 998 477 160 0 0 chr13 54242944 54243069 -66041243 + (GCTG)n Simple_repeat Simple_repeat 4 128 0 4 998 714 256 168 45 chr13 54243072 54243358 -66040954 + RMER4B LTR ERVK 251 571 -14 4 998 237 215 60 48 chr13 54243448 54243531 -66040781 - MLT1A1 LTR MaLR -324 84 1 4 998 1277 230 60 98 chr13 54244538 54244687 -66039625 - ORR1E LTR MaLR -6 353 228 4 998 1705 131 132 53 chr13 54244687 54244882 -66039430 + RMER17C LTR ERVK 3 183 -227 4 998 492 18 0 0 chr13 54244882 54244939 -66039373 + (TC)n Simple_repeat Simple_repeat 1 57 0 4 998 1705 131 132 53 chr13 54244939 54245121 -66039191 + RMER17C LTR ERVK 184 409 -1 4 998 1277 230 60 98 chr13 54245121 54245338 -66038974 - ORR1E LTR MaLR -132 227 1 4 998 211 407 23 0 chr13 54246133 54246219 -66038093 - L2b LINE L2 0 3375 3288 4 998 2485 127 74 34 chr13 54246817 54247168 -66037144 + RMER4A LTR ERVK 1 371 -95 4 998 243 0 0 0 chr13 54247168 54247195 -66037117 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 998 243 0 0 0 chr13 54247195 54247221 -66037091 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 998 2485 127 74 34 chr13 54247221 54247316 -66036996 + RMER4A LTR ERVK 372 464 -2 4 998 1910 118 163 0 chr13 54247556 54247888 -66036424 - ORR1B1 LTR MaLR -8 386 1 4 998 293 206 243 0 chr13 54248358 54248465 -66035847 - MER117 DNA MER1_type -12 185 53 4 998 1053 89 6 54 chr13 54248914 54249080 -66035232 + URR1A DNA MER1_type 69 226 0 4 998 405 39 0 0 chr13 54249480 54249531 -66034781 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 998 447 264 130 14 chr13 54249635 54249818 -66034494 + MTE2a LTR MaLR 204 406 -13 4 998 1517 288 93 20 chr13 54249915 54250071 -66034241 + RMER15-int LTR ERVL 4155 4318 -681 4 998 2172 135 54 11 chr13 54250071 54250423 -66033889 + ORR1B2 LTR MaLR 1 367 0 4 998 1517 288 93 20 chr13 54250423 54250769 -66033543 + RMER15-int LTR ERVL 4319 4694 -305 4 998 2239 64 21 69 chr13 54250774 54251109 -66033203 + ORR1A2 LTR MaLR 1 319 -8 4 998 313 260 144 98 chr13 54251121 54251377 -66032935 + Lx8 LINE L1 6776 7043 -430 4 998 495 78 78 0 chr13 54251497 54251613 -66032699 + GA-rich Low_complexity Low_complexity 1 125 0 4 998 546 306 100 66 chr13 54251613 54251872 -66032440 + RMER15 LTR ERVL 292 559 -16 4 998 256 203 113 28 chr13 54251875 54251946 -66032366 - B4A SINE B4 -80 212 136 4 998 668 228 25 88 chr13 54252174 54252448 -66031864 - RMER10A LTR ERVL -35 407 151 4 998 286 200 17 0 chr13 54252874 54252934 -66031378 - RLTR19-int LTR ERVK -2039 4098 4038 4 998 201 74 0 0 chr13 54253554 54253581 -66030731 + (ATG)n Simple_repeat Simple_repeat 2 28 0 4 998 249 279 134 64 chr13 54253770 54253927 -66030385 - MER5A DNA MER1_type -3 186 19 4 998 395 304 55 103 chr13 54253943 54254255 -66030057 - ORR1E LTR MaLR -49 310 14 4 998 1015 289 119 17 chr13 54254290 54254709 -66029603 + RMER5 LTR ERV1 72 533 -1 4 998 686 204 40 20 chr13 54255131 54255281 -66029031 - B3 SINE B2 -15 201 49 4 998 280 232 84 12 chr13 54255284 54255367 -66028945 + B3 SINE B2 30 118 -98 4 998 1002 111 59 0 chr13 54255478 54255631 -66028681 + RMER19A LTR ERVK 5 166 -571 4 998 819 193 7 13 chr13 54255637 54255789 -66028523 - RMER19B LTR ERVK -6 896 746 4 998 422 285 86 32 chr13 54255765 54255986 -66028326 + RLTR15 LTR ERVK 106 338 -21 4 998 273 269 68 77 chr13 54257306 54257423 -66026889 + MT2B LTR ERVL 137 252 -349 4 998 682 259 0 0 chr13 54257325 54257456 -66026856 + ID_B1 SINE B4 80 210 -14 4 998 419 0 20 0 chr13 54257458 54257509 -66026803 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 998 296 200 0 13 chr13 54257520 54257596 -66026716 + GA-rich Low_complexity Low_complexity 2 76 0 4 998 310 305 31 68 chr13 54257602 54257689 -66026623 + HAL1-3A_ME LINE L1 1968 2053 -805 4 998 467 320 14 7 chr13 54257689 54257837 -66026475 + B1F2 SINE Alu 1 149 0 4 998 1104 114 0 13 chr13 54257843 54257994 -66026318 + B1_Mur4 SINE Alu 1 149 -1 4 998 310 305 31 68 chr13 54257994 54258010 -66026302 + HAL1-3A_ME LINE L1 2059 2074 -784 4 998 1119 129 0 0 chr13 54258010 54258188 -66026124 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 4 998 310 305 31 68 chr13 54258188 54258238 -66026074 + HAL1-3A_ME LINE L1 2075 2123 -735 4 998 2591 153 5 0 chr13 54258279 54258671 -66025641 + ORR1B1 LTR MaLR 1 394 0 4 998 468 0 0 0 chr13 54259631 54259683 -66024629 + (TTTA)n Simple_repeat Simple_repeat 3 54 0 4 998 433 73 0 5 chr13 54259695 54259760 -66024552 - B2_Mm2 SINE B2 -107 109 47 4 998 1433 67 17 0 chr13 54259796 54259974 -66024338 - B2_Mm2 SINE B2 -14 181 1 4 998 210 200 39 26 chr13 54261737 54261814 -66022498 + (TTTG)n Simple_repeat Simple_repeat 1 78 0 4 998 216 191 0 0 chr13 54261746 54261793 -66022519 + T-rich Low_complexity Low_complexity 2 48 0 4 998 330 134 0 0 chr13 54262028 54262095 -66022217 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 4 998 739 268 29 24 chr13 54262151 54262361 -66021951 - B3 SINE B2 -5 211 1 4 998 455 284 88 121 chr13 54262371 54262851 -66021461 - L1MA4 LINE L1 -362 5938 5475 4 998 742 271 68 0 chr13 54262872 54263079 -66021233 - ID_B1 SINE B4 -1 223 3 4 998 414 286 50 16 chr13 54263079 54263200 -66021112 - B1F SINE Alu -3 146 22 4 998 560 286 70 38 chr13 54263204 54263619 -66020693 - L1MA4 LINE L1 -809 5491 5045 4 999 306 0 0 0 chr13 54263865 54263899 -66020413 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 4 999 363 265 161 60 chr13 54264181 54264375 -66019937 - MIRb SINE MIR -22 246 28 4 999 1229 21 7 45 chr13 54264941 54265403 -66018909 + (TTCC)n Simple_repeat Simple_repeat 1 444 0 4 999 425 198 9 0 chr13 54265405 54265516 -66018796 + CT-rich Low_complexity Low_complexity 3 114 0 4 999 1061 110 14 0 chr13 54265588 54265734 -66018578 - B1_Mur4 SINE Alu -2 148 1 4 999 385 257 55 63 chr13 54265840 54266040 -66018272 + MLT1F1 LTR MaLR 365 588 -3 4 999 274 265 0 0 chr13 54267936 54268004 -66016308 - PB1 SINE Alu -17 110 43 4 999 1519 65 16 0 chr13 54268353 54268539 -66015773 + B2_Mm2 SINE B2 2 190 -5 4 999 504 101 0 0 chr13 54269343 54269432 -66014880 + (TC)n Simple_repeat Simple_repeat 2 90 0 4 999 268 277 84 0 chr13 54269658 54269741 -66014571 - L2a LINE L2 -4 3422 3333 4 999 618 162 0 0 chr13 54271585 54271745 -66012567 + CT-rich Low_complexity Low_complexity 1 160 0 4 999 204 40 0 0 chr13 54271747 54271772 -66012540 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 999 1046 152 0 28 chr13 54272632 54272808 -66011504 + URR1B DNA MER1_type 55 225 0 4 999 387 292 67 102 chr13 54273111 54273488 -66010824 - MLT1A1 LTR MaLR 0 408 1 4 999 447 283 108 61 chr13 54273503 54273777 -66010535 + MLT1B LTR MaLR 113 505 0 4 999 1322 254 53 124 chr13 54274564 54275000 -66009312 + MTD LTR MaLR 1 405 -14 4 999 673 197 61 0 chr13 54275020 54275152 -66009160 + B1_Mus2 SINE Alu 7 146 -1 4 999 374 314 126 12 chr13 54275560 54275815 -66008497 + LTR33 LTR ERVL 229 512 -3 4 999 987 75 0 0 chr13 54277149 54277282 -66007030 + (GAAA)n Simple_repeat Simple_repeat 4 136 0 4 999 333 179 233 51 chr13 54277841 54277894 -66006418 - B3 SINE B2 0 216 137 4 999 186 43 0 0 chr13 54277894 54277917 -66006395 + (TC)n Simple_repeat Simple_repeat 2 24 0 4 999 516 32 0 0 chr13 54277917 54277978 -66006334 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 999 333 205 208 67 chr13 54277978 54278078 -66006234 - B3 SINE B2 -60 156 19 4 999 3324 47 12 2 chr13 54278380 54278783 -66005529 + MTB_Mm LTR MaLR 1 407 0 4 999 639 133 0 0 chr13 54279225 54279330 -66004982 + (TA)n Simple_repeat Simple_repeat 2 106 0 4 999 225 0 0 0 chr13 54279428 54279453 -66004859 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 999 874 304 122 57 chr13 54279709 54280215 -66004097 + MLT1F2 LTR MaLR 22 560 0 4 999 513 301 72 25 chr13 54280541 54280817 -66003495 + B4A SINE B4 2 290 -2 4 999 255 301 80 47 chr13 54280842 54280992 -66003320 - RLTR22_Mur LTR ERVK -388 1460 1306 4 999 273 261 0 0 chr13 54280995 54281060 -66003252 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 999 630 256 8 8 chr13 54281115 54281241 -66003071 + RSINE1 SINE B4 3 128 -37 4 999 270 0 0 0 chr13 54281247 54281277 -66003035 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 999 529 317 93 19 chr13 54281601 54281871 -66002441 - MLT2D LTR ERVL -52 362 73 4 999 256 341 82 37 chr13 54282650 54282784 -66001528 - ORR1E LTR MaLR -181 178 39 4 999 216 0 0 0 chr13 54283105 54283129 -66001183 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 4 999 180 0 0 0 chr13 54283528 54283548 -66000764 + (CCCCCA)n Simple_repeat Simple_repeat 5 24 0 4 999 222 62 0 0 chr13 54283617 54283649 -66000663 + (A)n Simple_repeat Simple_repeat 1 32 0 4 999 21 0 0 0 chr13 54283649 54283670 -66000642 + AT_rich Low_complexity Low_complexity 1 21 0 4 999 296 265 105 29 chr13 54284290 54284395 -65999917 + L2a LINE L2 3314 3426 0 4 999 595 194 100 8 chr13 54284427 54284557 -65999755 - ID_B1 SINE B4 -3 221 80 4 999 198 0 0 0 chr13 54284999 54285021 -65999291 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 4 999 197 65 0 31 chr13 54285054 54285086 -65999226 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 4 999 1525 68 0 0 chr13 54285311 54285502 -65998810 - LSU-rRNA_Hsa rRNA rRNA -511 4524 4334 4 999 351 80 0 0 chr13 54285504 54285554 -65998758 - LSU-rRNA_Hsa rRNA rRNA -2325 2710 2661 4 999 993 219 34 19 chr13 54285665 54285870 -65998442 + B3 SINE B2 5 212 -4 4 999 272 96 0 37 chr13 54287144 54287198 -65997114 + (TGGGGG)n Simple_repeat Simple_repeat 3 54 0 5 999 220 261 11 11 chr13 54287282 54287375 -65996937 + GA-rich Low_complexity Low_complexity 1 93 0 5 999 229 381 0 9 chr13 54289392 54289498 -65994814 + L3b LINE CR1 188 292 -190 5 999 437 310 74 11 chr13 54290621 54290797 -65993515 + MER20 DNA MER1_type 3 189 -30 5 999 1144 78 12 18 chr13 54290797 54291310 -65993002 + (TCTA)n Simple_repeat Simple_repeat 1 509 0 5 999 687 291 107 7 chr13 54291326 54291634 -65992678 - L1MB7 LINE L1 -216 5968 5630 5 999 233 290 29 48 chr13 54291997 54292102 -65992210 + MIR3 SINE MIR 82 184 -24 5 999 429 97 0 0 chr13 54293877 54293949 -65990363 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 999 261 231 0 0 chr13 54293949 54294001 -65990311 - RMER15 LTR ERVL -112 463 412 5 999 1875 308 58 16 chr13 54294002 54294830 -65989482 - Lx8 LINE L1 -205 7268 6406 5 999 222 287 48 122 chr13 54295127 54295274 -65989038 - B1_Mur4 SINE Alu -3 147 12 5 999 228 315 146 0 chr13 54295321 54295410 -65988902 - Tigger7 DNA MER2_type -2380 111 10 5 999 1307 111 31 124 chr13 54296151 54296409 -65987903 + ORR1C1 LTR MaLR 1 234 -144 5 999 313 85 43 0 chr13 54296404 54296451 -65987861 + ORR1C1 LTR MaLR 336 384 0 5 999 442 290 23 8 chr13 54296845 54296977 -65987335 - Tigger5 DNA MER2_type -113 2293 2160 5 999 27 0 0 0 chr13 54297093 54297120 -65987192 + AT_rich Low_complexity Low_complexity 1 27 0 5 999 194 289 58 46 chr13 54297220 54297307 -65987005 + L3 LINE CR1 4335 4422 -67 5 999 188 315 52 42 chr13 54298194 54298290 -65986022 - MIRc SINE MIR -126 142 46 5 999 274 316 152 24 chr13 54298531 54298742 -65985570 + MER113 DNA MER1_type 281 518 -3 5 999 199 373 0 0 chr13 54299516 54299583 -65984729 + L3 LINE CR1 4347 4413 -76 5 999 288 154 0 0 chr13 54299663 54299715 -65984597 + CT-rich Low_complexity Low_complexity 2 53 0 5 999 271 257 54 0 chr13 54299718 54299792 -65984520 - MIR3 SINE MIR -11 197 120 5 999 184 295 16 32 chr13 54300274 54300337 -65983975 - L2b LINE L2 -89 3286 3225 5 999 455 250 31 0 chr13 54300353 54300449 -65983863 + ID_B1 SINE B4 120 218 -6 5 999 239 197 76 0 chr13 54300794 54300860 -65983452 + L1MB7 LINE L1 5928 5998 -186 5 999 304 155 0 17 chr13 54300989 54301048 -65983264 + L1MCa LINE L1 1636 1693 -4815 5 999 341 269 19 9 chr13 54301177 54301282 -65983030 + MIRc SINE MIR 48 153 -115 5 999 297 0 0 0 chr13 54301574 54301607 -65982705 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 999 243 88 0 0 chr13 54301826 54301860 -65982452 + (A)n Simple_repeat Simple_repeat 1 34 0 5 999 580 288 26 52 chr13 54301953 54302147 -65982165 + MIRb SINE MIR 17 205 -63 5 999 290 232 9 0 chr13 54303260 54303372 -65980940 + (CA)n Simple_repeat Simple_repeat 1 113 0 5 999 186 241 17 25 chr13 54303411 54303530 -65980782 + (CA)n Simple_repeat Simple_repeat 2 119 0 5 999 294 230 13 7 chr13 54303612 54303761 -65980551 + (CA)n Simple_repeat Simple_repeat 2 151 0 5 999 258 229 7 13 chr13 54303847 54304002 -65980310 + (CA)n Simple_repeat Simple_repeat 2 155 0 5 999 204 231 48 64 chr13 54304820 54304945 -65979367 - L2c LINE L2 -246 3141 3019 5 999 676 192 4 11 chr13 54305743 54306006 -65978306 + (TGGA)n Simple_repeat Simple_repeat 1 261 0 5 999 329 303 122 63 chr13 54306135 54306464 -65977848 - ORR1E LTR MaLR 0 370 52 5 999 572 50 6 151 chr13 54307128 54307294 -65977018 + GA-rich Low_complexity Low_complexity 2 143 0 5 999 233 278 11 0 chr13 54307944 54308034 -65976278 + GA-rich Low_complexity Low_complexity 2 92 0 5 999 250 351 126 19 chr13 54308266 54308527 -65975785 + MER58B DNA MER1_type 29 317 -24 5 999 350 298 111 30 chr13 54312002 54312137 -65972175 - B3 SINE B2 -65 151 6 5 999 193 344 31 0 chr13 54312978 54313042 -65971270 - MIRm SINE MIR -189 87 22 5 999 218 270 98 20 chr13 54313610 54313712 -65970600 + L2a LINE L2 3277 3386 -40 5 999 213 114 0 28 chr13 54314120 54314156 -65970156 + (AGGGGG)n Simple_repeat Simple_repeat 6 40 0 5 999 279 347 20 23 chr13 54314730 54314897 -65969415 - L1MB8 LINE L1 -45 6139 5978 5 999 229 135 0 0 chr13 54314940 54314977 -65969335 - L1M5 LINE L1 -283 5896 5860 5 999 453 308 51 40 chr13 54316108 54316284 -65968028 - MER58B DNA MER1_type -75 266 89 5 999 265 325 99 6 chr13 54316342 54316513 -65967799 + MIRb SINE MIR 45 242 -26 5 999 247 282 100 41 chr13 54316914 54317037 -65967275 + MIRb SINE MIR 26 150 -58 5 999 192 217 0 0 chr13 54317893 54317939 -65966373 + CT-rich Low_complexity Low_complexity 2 47 0 5 999 610 297 40 0 chr13 54319251 54319399 -65964913 + RSINE1 SINE B4 2 155 -10 5 999 447 157 0 0 chr13 54319400 54319508 -65964804 + CT-rich Low_complexity Low_complexity 1 108 0 5 999 4679 77 0 12 chr13 54319964 54320555 -65963757 - MT2B2 LTR ERVL 0 584 1 5 999 184 360 141 12 chr13 54320559 54320722 -65963590 + MIR SINE MIR 60 243 -19 5 999 550 227 0 76 chr13 54322284 54322403 -65961909 - RSINE1 SINE B4 0 165 56 5 999 402 100 0 0 chr13 54322478 54322538 -65961774 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 999 685 271 0 12 chr13 54322759 54322920 -65961392 + RSINE1 SINE B4 7 165 0 5 999 185 356 78 98 chr13 54322946 54323151 -65961161 - L2b LINE L2 -81 3294 3084 5 999 296 197 106 0 chr13 54323151 54323217 -65961095 + ID4_ SINE ID 2 74 -9 5 999 185 356 78 98 chr13 54323217 54323307 -65961005 - L2b LINE L2 -292 3083 3005 5 999 604 115 19 0 chr13 54323822 54323926 -65960386 + (GGAA)n Simple_repeat Simple_repeat 3 108 0 5 999 426 222 64 18 chr13 54324560 54324670 -65959642 + PB1D7 SINE Alu 1 115 -5 5 999 237 132 0 0 chr13 54324813 54324851 -65959461 + (TAA)n Simple_repeat Simple_repeat 2 39 0 5 999 244 279 66 40 chr13 54324914 54325142 -65959170 + L1MEe LINE L1 931 1164 -3690 5 999 22 35 0 0 chr13 54325201 54325230 -65959082 + AT_rich Low_complexity Low_complexity 1 29 0 5 999 684 138 92 0 chr13 54325360 54325469 -65958843 + PB1D9 SINE Alu 1 119 -1 5 999 3507 44 0 2 chr13 54326136 54326544 -65957768 - MTB_Mm LTR MaLR 0 407 1 5 999 734 282 46 14 chr13 54326699 54326918 -65957394 + B4A SINE B4 2 227 -65 5 999 1527 238 118 11 chr13 54328108 54328136 -65956176 - MTD LTR MaLR 0 419 391 5 999 234 0 0 0 chr13 54328136 54328162 -65956150 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 999 1527 238 118 11 chr13 54328162 54328507 -65955805 - MTD LTR MaLR -29 390 7 5 999 226 163 23 0 chr13 54329112 54329155 -65955157 + GA-rich Low_complexity Low_complexity 2 45 0 5 999 257 279 104 26 chr13 54329173 54329336 -65954976 - MIRb SINE MIR -27 241 55 5 999 587 154 8 0 chr13 54329346 54329463 -65954849 + (TGGA)n Simple_repeat Simple_repeat 4 121 0 5 999 253 290 134 13 chr13 54330243 54330400 -65953912 + L2 LINE L2 2408 2583 -836 5 999 596 136 0 8 chr13 54331563 54331689 -65952623 + (TC)n Simple_repeat Simple_repeat 2 126 0 5 999 564 316 60 15 chr13 54331824 54332023 -65952289 + B4A SINE B4 9 216 -76 5 999 510 209 246 33 chr13 54332023 54332094 -65952218 + ID_B1 SINE B4 1 222 -2 5 999 883 45 9 0 chr13 54332094 54332206 -65952106 + B1_Mus1 SINE Alu 35 147 -1 5 999 481 171 0 26 chr13 54332229 54332307 -65952005 + B3 SINE B2 44 119 -97 5 999 288 0 0 0 chr13 54332310 54332342 -65951970 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 999 484 196 28 64 chr13 54333523 54333632 -65950680 - B1F SINE Alu 0 149 45 5 999 529 277 118 46 chr13 54334887 54335167 -65949145 + Lx9 LINE L1 7308 7607 -37 5 999 1148 75 7 0 chr13 54335211 54335357 -65948955 + B1_Mus2 SINE Alu 1 147 0 5 999 216 97 0 0 chr13 54335357 54335388 -65948924 + (A)n Simple_repeat Simple_repeat 1 31 0 5 999 646 347 80 0 chr13 54335811 54336036 -65948276 + Tigger5 DNA MER2_type 1 243 -2163 5 999 254 312 144 39 chr13 54337036 54337216 -65947096 - MER2 DNA MER2_type -61 284 86 5 999 1940 154 54 39 chr13 54338204 54338590 -65945722 - RMER10A LTR ERVL -49 393 2 5 999 998 56 0 0 chr13 54339093 54339219 -65945093 + B1_Mm SINE Alu 22 147 0 5 999 1477 80 16 0 chr13 54339330 54339517 -65944795 + B2_Mm2 SINE B2 2 191 -4 5 999 777 98 0 0 chr13 54339517 54339629 -65944683 + (GGAA)n Simple_repeat Simple_repeat 3 114 0 5 999 954 344 90 8 chr13 54340288 54340643 -65943669 + MER21B LTR ERV1 58 441 -422 5 999 258 324 0 0 chr13 54341166 54341425 -65942887 + (CCCA)n Simple_repeat Simple_repeat 1 259 0 5 999 253 336 119 17 chr13 54341542 54341660 -65942652 - MLT1F2 LTR MaLR -427 133 4 5 999 315 0 0 0 chr13 54344224 54344259 -65940053 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 999 217 238 45 60 chr13 54344744 54344811 -65939501 + MIRc SINE MIR 39 104 -164 5 999 207 0 0 0 chr13 54345131 54345154 -65939158 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 5 999 424 375 82 31 chr13 54345164 54345481 -65938831 - MLT1J-int LTR MaLR -1047 340 8 5 999 935 264 30 33 chr13 54348214 54348551 -65935761 + RLTR15 LTR ERVK 8 343 -16 5 999 212 269 0 0 chr13 54348702 54348754 -65935558 - L2b LINE L2 -25 3350 3299 5 999 1169 76 7 0 chr13 54349422 54349567 -65934745 + B1_Mus1 SINE Alu 2 147 -1 5 999 201 94 0 0 chr13 54349572 54349604 -65934708 + (A)n Simple_repeat Simple_repeat 1 32 0 5 999 598 276 115 80 chr13 54349874 54350213 -65934099 + MLT1A LTR MaLR 24 374 0 5 999 192 311 122 36 chr13 54350312 54350458 -65933854 + MIRb SINE MIR 37 187 -81 5 999 310 258 43 43 chr13 54351304 54351442 -65932870 - Tigger16a DNA Tigger -182 751 614 6 999 313 207 34 11 chr13 54351446 54351534 -65932778 + L1MB1 LINE L1 5941 6030 -159 6 999 302 370 68 34 chr13 54354358 54354565 -65929747 + MLT1K LTR MaLR 94 307 -288 6 999 1648 132 86 23 chr13 54354550 54354956 -65929356 - ORR1A4 LTR MaLR -8 386 1 6 999 291 304 20 0 chr13 54355061 54355163 -65929149 + MLT1K LTR MaLR 471 574 -21 6 999 180 0 0 0 chr13 54355206 54355226 -65929086 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 999 407 334 119 43 chr13 54355319 54355647 -65928665 - ORR1D2 LTR MaLR -13 357 5 6 999 374 345 152 17 chr13 54356119 54356296 -65928016 + MLT1H LTR MaLR 59 259 -290 6 999 266 289 48 0 chr13 54356410 54356493 -65927819 - MER45C DNA Tip100 -865 88 2 6 999 22 0 0 0 chr13 54357236 54357258 -65927054 + AT_rich Low_complexity Low_complexity 1 22 0 6 999 665 118 0 8 chr13 54357348 54357468 -65926844 + (TG)n Simple_repeat Simple_repeat 2 120 0 6 999 527 213 18 9 chr13 54357468 54357577 -65926735 - RSINE1 SINE B4 -41 124 15 6 999 26 0 0 0 chr13 54357578 54357604 -65926708 + AT_rich Low_complexity Low_complexity 1 26 0 6 999 285 208 19 0 chr13 54357802 54357855 -65926457 + MIRc SINE MIR 100 153 -115 6 999 332 270 22 11 chr13 54358784 54358874 -65925438 + MLT1H LTR MaLR 314 404 -4 6 999 248 120 0 20 chr13 54360628 54360679 -65923633 + (CAAAAA)n Simple_repeat Simple_repeat 4 53 0 6 999 186 263 0 0 chr13 54363504 54363542 -65920770 + MIRm SINE MIR 117 154 -122 6 999 189 360 13 26 chr13 54364585 54364662 -65919650 + MIRc SINE MIR 88 163 -105 6 999 459 0 0 0 chr13 54364743 54364794 -65919518 + (TCC)n Simple_repeat Simple_repeat 1 51 0 6 999 830 261 94 84 chr13 54365739 54366145 -65918167 + LTR55 LTR ERV 1 410 -138 6 999 1355 81 11 21 chr13 54366217 54366407 -65917905 - B2_Mm1t SINE B2 -5 188 1 6 999 475 273 53 47 chr13 54366530 54366680 -65917632 - ORR1D2 LTR MaLR -5 365 215 6 999 651 220 15 0 chr13 54366806 54366936 -65917376 + B1_Mur4 SINE Alu 10 142 -8 6 999 263 294 46 166 chr13 54366823 54366974 -65917338 + B4 SINE B4 112 244 -48 6 999 508 323 50 5 chr13 54366998 54367219 -65917093 + L1MD1 LINE L1 33 263 -6370 6 999 1523 127 121 46 chr13 54367379 54367761 -65916551 - ORR1A3 LTR MaLR 0 346 1 6 999 329 292 102 5 chr13 54368024 54368220 -65916092 + L1MD1 LINE L1 312 526 -6107 6 999 1036 244 40 56 chr13 54368322 54368699 -65915613 + L1MD1 LINE L1 3783 4153 -2384 6 999 2589 164 65 26 chr13 54368719 54369227 -65915085 + RLTR11A LTR ERVK 1 528 0 6 999 695 266 73 33 chr13 54369238 54369538 -65914774 + L1MD1 LINE L1 4221 4532 -2005 6 999 1131 98 0 0 chr13 54369546 54369709 -65914603 + (GAGAA)n Simple_repeat Simple_repeat 3 165 0 6 999 1133 168 58 10 chr13 54369733 54369938 -65914374 + B3 SINE B2 1 215 -1 6 999 371 280 85 20 chr13 54369994 54370147 -65914165 + B4A SINE B4 48 210 -82 6 999 474 247 0 0 chr13 54370150 54370328 -65913984 + (CA)n Simple_repeat Simple_repeat 1 178 0 6 999 381 274 8 23 chr13 54370335 54370466 -65913846 + (CATA)n Simple_repeat Simple_repeat 4 132 0 6 999 524 321 130 56 chr13 54370479 54371017 -65913295 + L1MD1 LINE L1 4556 5133 -1404 6 999 24 32 0 0 chr13 54371111 54371142 -65913170 + AT_rich Low_complexity Low_complexity 1 31 0 6 999 1218 282 67 36 chr13 54371142 54371620 -65912692 + L1MD1 LINE L1 5121 5613 -924 6 999 587 150 174 8 chr13 54371748 54371869 -65912443 + B1F SINE Alu 1 141 -8 6 999 416 232 232 0 chr13 54372014 54372126 -65912186 + MTD LTR MaLR 73 210 -209 6 999 986 234 17 9 chr13 54372126 54372382 -65911930 + Lx2B LINE L1 6651 6924 -57 6 999 180 97 0 0 chr13 54372405 54372436 -65911876 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 999 352 294 159 41 chr13 54372437 54372450 -65911862 + MTD LTR MaLR 182 193 -207 6 999 180 0 0 0 chr13 54372450 54372470 -65911842 + (CAGA)n Simple_repeat Simple_repeat 2 21 0 6 999 651 185 183 26 chr13 54372470 54372632 -65911680 + MTD LTR MaLR 194 394 -25 6 999 272 295 9 18 chr13 54372718 54372832 -65911480 + L1MD1 LINE L1 5667 5779 -758 6 999 286 324 26 33 chr13 54372898 54373051 -65911261 + L1MD1 LINE L1 5881 6032 -601 6 999 250 266 241 42 chr13 54373184 54373420 -65910892 + L1MD1 LINE L1 6240 6522 -111 6 999 24 55 0 18 chr13 54373478 54373502 -65910810 + AT_rich Low_complexity Low_complexity 1 24 0 6 999 806 274 0 66 chr13 54373502 54373713 -65910599 + B3A SINE B2 1 197 -1 6 999 24 55 0 18 chr13 54373713 54373744 -65910568 + AT_rich Low_complexity Low_complexity 1 31 0 6 999 324 0 0 0 chr13 54373868 54373904 -65910408 + (TC)n Simple_repeat Simple_repeat 2 37 0 6 999 360 0 0 0 chr13 54373904 54373943 -65910369 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 999 774 95 60 3 chr13 54374040 54374328 -65909984 + (TAGA)n Simple_repeat Simple_repeat 1 304 0 6 999 405 197 0 0 chr13 54374758 54374829 -65909483 + B3 SINE B2 141 211 -5 6 999 2098 105 18 60 chr13 54374855 54375190 -65909122 + ORR1A4 LTR MaLR 1 321 -8 6 999 628 177 44 51 chr13 54375197 54375334 -65908978 + B1_Mur1 SINE Alu 14 149 0 6 999 767 108 8 0 chr13 54375350 54375470 -65908842 + (GGAA)n Simple_repeat Simple_repeat 2 122 0 6 999 487 289 8 8 chr13 54375751 54375873 -65908439 + Tigger7 DNA MER2_type 12 133 -2358 6 999 715 238 80 11 chr13 54375918 54376105 -65908207 + Tigger7 DNA MER2_type 207 406 -2085 6 999 1579 207 87 28 chr13 54376139 54376531 -65907781 + MTD LTR MaLR 5 419 0 6 999 264 247 50 70 chr13 54376531 54376628 -65907684 + Tigger7 DNA MER2_type 2392 2486 -5 6 999 663 351 86 49 chr13 54376785 54377190 -65907122 - MER21B LTR ERV1 -235 628 209 6 999 180 282 13 78 chr13 54378078 54378155 -65906157 + L2 LINE L2 138 209 -3210 6 999 324 200 29 0 chr13 54378630 54378700 -65905612 + MIRb SINE MIR 65 136 -132 6 999 396 268 111 41 chr13 54379026 54379197 -65905115 + RMER15 LTR ERVL 39 221 -354 6 999 804 251 41 50 chr13 54379206 54379424 -65904888 + RMER15 LTR ERVL 346 561 -14 6 999 685 332 47 14 chr13 54379587 54379865 -65904447 + MLT1A1 LTR MaLR 110 396 -12 6 999 214 368 74 49 chr13 54380888 54381051 -65903261 + MIR SINE MIR 81 247 -15 6 999 218 243 145 21 chr13 54381713 54381843 -65902469 + MIRc SINE MIR 32 184 -92 6 999 198 91 0 0 chr13 54382391 54382424 -65901888 + (CAG)n Simple_repeat Simple_repeat 3 35 0 6 999 943 252 146 18 chr13 54382646 54382974 -65901338 - ORR1D2 LTR MaLR 0 370 1 6 999 1008 25 0 0 chr13 54383563 54383682 -65900630 + (GGGAGA)n Simple_repeat Simple_repeat 3 121 0 6 999 1819 239 68 40 chr13 54384110 54384608 -65899704 + Lx6 LINE L1 6945 7456 -4 6 999 240 333 0 0 chr13 54384869 54384941 -65899371 + MLT1G1-int LTR MaLR 1273 1344 -145 6 999 1443 225 89 42 chr13 54385124 54385505 -65898807 + MTD LTR MaLR 1 399 -20 6 999 251 264 53 69 chr13 54385759 54385910 -65898402 + MLT1G1 LTR MaLR 448 553 -26 6 999 799 268 53 10 chr13 54386169 54386376 -65897936 - B3 SINE B2 0 216 1 6 999 450 229 40 40 chr13 54386534 54386684 -65897628 - RLTR15 LTR ERVK -209 150 1 6 999 335 219 0 19 chr13 54386942 54387049 -65897263 + (TATG)n Simple_repeat Simple_repeat 2 106 0 6 999 240 200 0 0 chr13 54387073 54387123 -65897189 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 999 1314 278 66 31 chr13 54387125 54387603 -65896709 - MLT2B1 LTR ERVL -40 515 3 6 999 608 323 20 25 chr13 54388223 54388423 -65895889 - MLT1K LTR MaLR 0 595 397 6 999 3166 54 0 19 chr13 54388607 54389022 -65895290 - MTB_Mm LTR MaLR 0 407 1 6 999 727 312 160 25 chr13 54389235 54389825 -65894487 - L1MC1 LINE L1 -5 6328 5660 6 999 721 161 0 22 chr13 54389832 54390016 -65894296 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 999 660 195 0 0 chr13 54390068 54390242 -65894070 + (TG)n Simple_repeat Simple_repeat 1 174 0 6 999 377 331 0 32 chr13 54390275 54390400 -65893912 - B4 SINE B4 -4 288 168 6 999 311 375 83 18 chr13 54390723 54391000 -65893312 + L2a LINE L2 3105 3399 -27 6 999 196 260 20 0 chr13 54390993 54391043 -65893269 + L2b LINE L2 3325 3375 0 6 999 433 210 8 31 chr13 54391043 54391159 -65893153 + B1F SINE Alu 10 117 -3 6 999 277 122 0 0 chr13 54391406 54391447 -65892865 - MIRc SINE MIR -115 153 113 6 999 21 36 0 0 chr13 54391993 54392021 -65892291 + AT_rich Low_complexity Low_complexity 1 28 0 6 999 1852 225 57 9 chr13 54392030 54392488 -65891824 - MT2A LTR ERVL -45 488 9 6 999 186 344 58 63 chr13 54392905 54393079 -65891233 + MIRb SINE MIR 27 199 -69 6 999 1189 61 0 0 chr13 54393111 54393259 -65891053 + B1_Mus1 SINE Alu 1 148 0 6 999 216 77 58 0 chr13 54393261 54393313 -65890999 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 6 999 681 242 31 41 chr13 54393386 54393580 -65890732 + B3A SINE B2 5 196 -2 6 999 345 227 61 20 chr13 54393924 54394023 -65890289 + MLT1A1 LTR MaLR 304 406 -2 6 1000 234 250 0 0 chr13 54396282 54396330 -65887982 + CT-rich Low_complexity Low_complexity 1 48 0 6 1000 250 319 0 33 chr13 54396356 54396476 -65887836 + MLT1A1 LTR MaLR 291 406 -2 6 1000 306 239 152 0 chr13 54396696 54396788 -65887524 + PB1D10 SINE Alu 4 109 -8 6 1000 397 297 54 8 chr13 54396790 54396919 -65887393 + MER2B DNA MER2_type 202 336 0 6 1000 230 336 22 81 chr13 54397047 54397183 -65887129 - L2b LINE L2 -250 3176 3047 6 1000 183 302 77 31 chr13 54397363 54397428 -65886884 - L2c LINE L2 -25 3362 3295 6 1000 277 290 12 46 chr13 54399276 54399375 -65884937 - MIR SINE MIR -88 120 30 6 1000 736 238 71 15 chr13 54399969 54400165 -65884147 + ID_B1 SINE B4 1 207 -17 6 1000 426 88 24 24 chr13 54400255 54400337 -65883975 + (CATA)n Simple_repeat Simple_repeat 1 82 0 6 1000 315 103 88 25 chr13 54400394 54400553 -65883759 + (CA)n Simple_repeat Simple_repeat 1 169 0 6 1000 201 368 82 14 chr13 54401874 54402020 -65882292 - L2b LINE L2 -1 3374 3219 6 1000 249 379 41 12 chr13 54402121 54402292 -65882020 - L2b LINE L2 -369 3050 2875 6 1000 439 318 71 109 chr13 54402693 54403241 -65881071 - RLTR11A2 LTR ERVK 0 527 1 6 1000 185 368 98 7 chr13 54403321 54403474 -65880838 + MIR SINE MIR 35 201 -61 6 1000 949 272 90 11 chr13 54403508 54403706 -65880606 + B4A SINE B4 2 217 -75 6 1000 315 71 0 0 chr13 54403706 54403748 -65880564 + (TAA)n Simple_repeat Simple_repeat 2 43 0 6 1000 949 272 90 11 chr13 54403748 54403796 -65880516 + B4A SINE B4 218 270 -22 6 1000 270 0 0 0 chr13 54403796 54403826 -65880486 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1000 949 272 90 11 chr13 54403826 54403846 -65880466 + B4A SINE B4 271 289 -3 6 1000 1242 57 0 0 chr13 54403879 54404038 -65880274 + (GAAA)n Simple_repeat Simple_repeat 4 162 0 6 1000 199 261 60 30 chr13 54404223 54404290 -65880022 - MIR SINE MIR -76 132 64 6 1000 183 290 167 9 chr13 54404296 54404404 -65879908 + L2a LINE L2 3289 3413 -13 7 1000 224 261 94 51 chr13 54404959 54405088 -65879224 + MIRm SINE MIR 61 196 -12 7 1000 195 238 48 0 chr13 54405202 54405265 -65879047 - L2c LINE L2 -69 3318 3253 7 1000 203 237 0 0 chr13 54405481 54405519 -65878793 + (CTGGGG)n Simple_repeat Simple_repeat 6 43 0 7 1000 205 293 0 39 chr13 54406998 54407076 -65877236 - MIRc SINE MIR -104 164 90 7 1000 236 297 119 77 chr13 54407624 54407792 -65876520 - MIRb SINE MIR -64 204 30 7 1000 217 359 30 38 chr13 54408565 54408698 -65875614 - MIR3 SINE MIR -73 135 4 7 1000 373 236 111 115 chr13 54408912 54409147 -65875165 - CR1_Mam LINE CR1 -814 1390 1157 7 1000 322 283 41 24 chr13 54411117 54411240 -65873072 + Charlie15a DNA MER1_type 100 224 0 7 1000 455 327 100 32 chr13 54411384 54411665 -65872647 + MER113A DNA MER1_type 8 307 -7 7 1000 430 315 23 8 chr13 54411915 54412046 -65872266 + RSINE1 SINE B4 4 136 -29 7 1000 201 182 23 0 chr13 54412046 54412072 -65872240 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 7 1000 1333 89 21 0 chr13 54412072 54412262 -65872050 + B2_Mm2 SINE B2 2 195 0 7 1000 201 182 23 0 chr13 54412262 54412279 -65872033 + (TAAA)n Simple_repeat Simple_repeat 3 19 0 7 1000 303 93 0 0 chr13 54412335 54412378 -65871934 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1000 510 309 20 38 chr13 54412384 54412643 -65871669 + Tigger5 DNA MER2_type 87 282 -2124 7 1000 381 22 0 0 chr13 54415257 54415303 -65869009 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1000 261 0 0 0 chr13 54415308 54415337 -65868975 + (CAGA)n Simple_repeat Simple_repeat 4 32 0 7 1000 468 235 31 0 chr13 54415487 54415585 -65868727 + B1_Mur2 SINE Alu 1 101 -48 7 1000 231 243 41 41 chr13 54415533 54415606 -65868706 + RLTR25A LTR ERVK 524 596 -507 7 1000 210 71 0 0 chr13 54415861 54415889 -65868423 + (TCCCG)n Simple_repeat Simple_repeat 2 29 0 7 1000 789 200 21 59 chr13 54416033 54416219 -65868093 + B3A SINE B2 4 182 -16 7 1000 282 332 78 31 chr13 54416604 54416859 -65867453 - L1ME3A LINE L1 -66 6107 5841 7 1000 1132 41 0 20 chr13 54417531 54417681 -65866631 + B1_Mus1 SINE Alu 1 147 -1 7 1000 294 282 120 39 chr13 54418136 54418344 -65865968 - L2a LINE L2 0 3387 3192 7 1000 941 103 0 20 chr13 54420130 54420278 -65864034 + B1_Mur4 SINE Alu 1 145 -5 7 1000 292 302 26 0 chr13 54420493 54420609 -65863703 + (TGGA)n Simple_repeat Simple_repeat 1 119 0 7 1000 568 242 103 58 chr13 54421594 54421818 -65862494 - Charlie19a DNA Charlie -3 383 150 7 1000 501 17 0 0 chr13 54422139 54422197 -65862115 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 1000 369 0 0 0 chr13 54422922 54422963 -65861349 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1000 609 346 49 12 chr13 54423147 54423393 -65860919 - Tigger7 DNA MER2_type -2228 263 9 7 1000 194 278 69 0 chr13 54423435 54423507 -65860805 - L2b LINE L2 -56 3319 3243 7 1000 770 65 0 55 chr13 54424102 54424265 -65860047 + (CCCCCA)n Simple_repeat Simple_repeat 2 155 0 7 1000 238 274 48 0 chr13 54424691 54424753 -65859559 + L3 LINE CR1 4306 4370 -119 7 1000 3161 49 2 15 chr13 54425825 54426237 -65858075 - MTB_Mm LTR MaLR 0 407 1 7 1000 222 191 0 0 chr13 54426709 54426751 -65857561 + (TGG)n Simple_repeat Simple_repeat 2 43 0 7 1000 191 261 115 42 chr13 54427743 54427839 -65856473 - MIRc SINE MIR -126 142 40 7 1000 257 362 82 39 chr13 54428086 54428368 -65855944 - L2c LINE L2 -50 3337 3044 7 1000 326 296 48 96 chr13 54429425 54429450 -65854862 + B4A SINE B4 69 149 -143 7 1000 813 185 0 0 chr13 54429450 54429585 -65854727 + B1_Mur2 SINE Alu 10 144 -5 7 1000 326 296 48 96 chr13 54429585 54429612 -65854700 + B4A SINE B4 150 246 -46 7 1000 251 211 0 34 chr13 54429612 54429671 -65854641 + GA-rich Low_complexity Low_complexity 3 59 0 7 1000 920 126 0 7 chr13 54429673 54429825 -65854487 + (GAA)n Simple_repeat Simple_repeat 2 152 0 7 1000 211 291 110 12 chr13 54429826 54429978 -65854334 - L2c LINE L2 -142 3233 3063 7 1000 357 109 0 0 chr13 54430208 54430263 -65854049 + (ATG)n Simple_repeat Simple_repeat 1 55 0 7 1000 228 67 0 0 chr13 54431369 54431399 -65852913 + (T)n Simple_repeat Simple_repeat 1 30 0 7 1000 452 225 54 0 chr13 54431437 54431548 -65852764 + L1M5 LINE L1 3535 3651 -2495 7 1000 262 208 91 0 chr13 54431613 54431690 -65852622 + L1M5 LINE L1 3645 3728 -2418 7 1000 208 217 0 0 chr13 54431986 54432032 -65852280 + C-rich Low_complexity Low_complexity 1 46 0 7 1000 227 264 85 69 chr13 54432962 54433092 -65851220 + MIRc SINE MIR 39 170 -98 7 1000 23 0 0 0 chr13 54433411 54433434 -65850878 + AT_rich Low_complexity Low_complexity 1 23 0 7 1000 1108 68 0 20 chr13 54433511 54433660 -65850652 + B1_Mm SINE Alu 2 147 0 7 1000 8017 34 1 3 chr13 54434731 54436333 -65847979 - L1Md_F2 LINE L1 -3 6579 4983 7 1000 185 362 0 0 chr13 54438180 54438238 -65846074 + MIR SINE MIR 87 144 -64 7 1000 876 196 0 0 chr13 54438299 54438478 -65845834 + CT-rich Low_complexity Low_complexity 2 180 0 7 1000 239 231 68 0 chr13 54438564 54438646 -65845666 - MIR SINE MIR -141 127 41 7 1000 198 71 0 0 chr13 54439063 54439091 -65845221 + (CGGTG)n Simple_repeat Simple_repeat 1 28 0 7 1000 337 250 78 49 chr13 54440478 54440701 -65843611 - L2b LINE L2 -254 3121 2893 7 1000 252 0 0 0 chr13 54441983 54442011 -65842301 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1000 3055 48 5 12 chr13 54442920 54443323 -65840989 - MTB LTR MaLR 0 400 1 7 1000 424 369 41 67 chr13 54444297 54444640 -65839672 + MER113 DNA MER1_type 185 518 -3 7 1000 317 204 23 35 chr13 54445479 54445652 -65838660 + (TG)n Simple_repeat Simple_repeat 1 171 0 7 1000 565 139 34 28 chr13 54445699 54445877 -65838435 + (TG)n Simple_repeat Simple_repeat 2 180 0 7 1000 773 158 8 8 chr13 54459100 54459234 -65825078 + B1_Mus2 SINE Alu 13 146 -1 7 1000 189 132 0 0 chr13 54459343 54459381 -65824931 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 7 1000 192 211 0 0 chr13 54459546 54459584 -65824728 + MIR SINE MIR 36 73 -135 7 1000 189 340 75 0 chr13 54460293 54460412 -65823900 + MIRc SINE MIR 46 181 -87 7 1000 321 370 42 38 chr13 54460439 54460675 -65823637 - MIRb SINE MIR -16 252 16 7 1000 257 274 0 14 chr13 54462223 54462297 -65822015 - MLT1K LTR MaLR -141 454 382 7 1000 241 373 9 26 chr13 54462386 54462499 -65821813 - MLT1K LTR MaLR -384 211 101 7 1000 419 223 138 0 chr13 54463826 54463848 -65820464 + B1F1 SINE Alu 1 148 -1 7 1000 543 185 19 0 chr13 54463848 54463956 -65820356 + ID_B1 SINE B4 112 221 -3 7 1000 3302 56 13 2 chr13 54463957 54464353 -65819959 - MTB LTR MaLR 0 400 1 7 1000 478 301 78 0 chr13 54464374 54464540 -65819772 - MER2 DNA MER2_type -135 210 32 7 1000 433 238 38 9 chr13 54464629 54464735 -65819577 + MER2B DNA MER2_type 223 331 -5 7 1000 228 352 11 0 chr13 54465210 54465311 -65819001 + MIRc SINE MIR 68 172 -36 7 1000 486 0 0 0 chr13 54465530 54465584 -65818728 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1000 180 389 11 0 chr13 54465921 54466011 -65818301 - MIRb SINE MIR -58 210 120 7 1000 211 328 25 49 chr13 54467478 54467600 -65816712 - MER5B DNA MER1_type -21 157 39 7 1000 261 0 0 0 chr13 54467770 54467799 -65816513 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1000 441 0 0 0 chr13 54469867 54469916 -65814396 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1000 513 0 0 0 chr13 54470003 54470060 -65814252 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 7 1000 202 348 11 22 chr13 54470190 54470281 -65814031 + MIR SINE MIR 58 147 -61 7 1000 582 15 0 0 chr13 54470631 54470698 -65813614 + (GA)n Simple_repeat Simple_repeat 2 68 0 7 1000 198 0 0 0 chr13 54471470 54471492 -65812820 + (CA)n Simple_repeat Simple_repeat 2 23 0 7 1000 304 312 40 0 chr13 54472502 54472627 -65811685 + GA-rich Low_complexity Low_complexity 2 131 0 7 1000 512 100 12 0 chr13 54472632 54472712 -65811600 + (GA)n Simple_repeat Simple_repeat 1 81 0 7 1000 528 16 0 0 chr13 54474401 54474462 -65809850 + (CA)n Simple_repeat Simple_repeat 1 61 0 7 1000 276 307 190 14 chr13 54474804 54474946 -65809366 - MIRb SINE MIR -44 224 58 7 1000 985 56 0 20 chr13 54476479 54476618 -65807694 + B1_Mus1 SINE Alu 6 142 -6 7 1000 618 82 0 0 chr13 54476618 54476703 -65807609 + (GA)n Simple_repeat Simple_repeat 2 86 0 7 1000 1980 246 34 35 chr13 54476727 54477222 -65807090 + Lx6 LINE L1 6571 7430 -30 7 1000 189 0 0 0 chr13 54477222 54477243 -65807069 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 7 1000 1980 242 35 35 chr13 54477243 54477280 -65807032 + Lx6 LINE L1 7431 7459 -1 7 1000 185 305 17 0 chr13 54477569 54477628 -65806684 - MIR SINE MIR -115 93 34 7 1000 696 177 193 0 chr13 54478514 54478695 -65805617 + B3 SINE B2 1 216 0 7 1000 24 32 0 0 chr13 54478914 54478945 -65805367 + AT_rich Low_complexity Low_complexity 1 31 0 7 1000 229 351 26 26 chr13 54479328 54479445 -65804867 - MIRc SINE MIR -121 147 31 7 1000 710 172 153 6 chr13 54479515 54479685 -65804627 + B3 SINE B2 9 203 -13 7 1000 225 0 0 0 chr13 54479686 54479711 -65804601 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 7 1000 212 317 0 0 chr13 54480203 54480285 -65804027 + GA-rich Low_complexity Low_complexity 1 82 0 7 1000 234 0 0 0 chr13 54481106 54481132 -65803180 + (T)n Simple_repeat Simple_repeat 1 26 0 7 1000 408 151 0 0 chr13 54481310 54481350 -65802962 + polypurine Low_complexity Low_complexity 3 42 0 7 1000 1452 44 0 0 chr13 54481350 54481530 -65802782 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1000 408 151 0 0 chr13 54481530 54481562 -65802750 + polypurine Low_complexity Low_complexity 43 74 0 7 1000 210 234 0 21 chr13 54484190 54484238 -65800074 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1000 728 206 11 0 chr13 54484239 54484414 -65799898 + (CATA)n Simple_repeat Simple_repeat 2 178 0 8 1000 196 77 51 0 chr13 54485279 54485318 -65798994 + (TCTG)n Simple_repeat Simple_repeat 3 43 0 8 1000 238 333 68 37 chr13 54486391 54486553 -65797759 + MIRb SINE MIR 70 236 -32 8 1000 874 314 40 78 chr13 54486633 54487107 -65797205 - MLT1F2 LTR MaLR -62 498 43 8 1000 258 337 31 0 chr13 54487653 54487751 -65796561 - L2c LINE L2 -209 3178 3078 8 1000 493 224 146 120 chr13 54489224 54489457 -65794855 - RMER15 LTR ERVL -1 574 336 8 1000 636 358 87 76 chr13 54489953 54490088 -65794224 - MLT1F LTR MaLR -4 544 395 8 1000 682 206 43 0 chr13 54490088 54490229 -65794083 + B1_Mur1 SINE Alu 3 149 0 8 1000 636 358 87 76 chr13 54490229 54490631 -65793681 - MLT1F LTR MaLR -154 394 1 8 1000 3399 52 0 5 chr13 54490693 54491095 -65793217 - MTB LTR MaLR 0 400 1 8 1000 668 228 51 7 chr13 54491190 54491327 -65792985 + B1F SINE Alu 4 146 -3 8 1000 495 278 12 53 chr13 54491831 54492002 -65792310 - MER5B DNA MER1_type 0 178 15 8 1000 204 257 149 0 chr13 54492111 54492185 -65792127 - L2a LINE L2 -105 3321 3237 8 1000 1069 239 9 19 chr13 54492509 54492722 -65791590 - B3 SINE B2 -5 211 1 8 1000 296 270 117 0 chr13 54492917 54493028 -65791284 - MIR3 SINE MIR -19 189 66 8 1000 533 242 17 101 chr13 54493226 54493405 -65790907 - MER44B DNA MER2_type -91 459 296 8 1000 472 355 153 4 chr13 54493654 54493928 -65790384 - MER44B DNA MER2_type -231 319 5 8 1000 944 144 121 50 chr13 54494054 54494252 -65790060 + B3 SINE B2 5 216 0 8 1000 180 0 0 0 chr13 54494276 54494296 -65790016 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 8 1000 1092 73 0 0 chr13 54494296 54494432 -65789880 - B1_Mus2 SINE Alu -10 137 2 8 1000 1444 56 0 16 chr13 54494432 54494614 -65789698 - B2_Mm2 SINE B2 -16 179 1 8 1000 225 83 0 0 chr13 54494615 54494651 -65789661 + (A)n Simple_repeat Simple_repeat 1 36 0 8 1000 547 274 59 73 chr13 54494932 54495152 -65789160 + MLT1D LTR MaLR 285 501 -4 8 1000 1761 273 83 25 chr13 54495847 54496288 -65788024 + RCHARR1 DNA MER1_type 40 512 -462 8 1000 1134 90 0 7 chr13 54496288 54496434 -65787878 + B1_Mm SINE Alu 3 147 0 8 1000 1761 273 83 25 chr13 54496434 54496545 -65787767 + RCHARR1 DNA MER1_type 513 623 -351 8 1000 314 217 0 0 chr13 54496539 54496608 -65787704 + RCHARR1 DNA MER1_type 851 919 -55 8 1000 213 132 0 0 chr13 54497431 54497469 -65786843 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1000 211 200 0 0 chr13 54497513 54497553 -65786759 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1000 243 104 90 0 chr13 54497772 54497839 -65786473 + (TCTCTG)n Simple_repeat Simple_repeat 4 76 0 8 1000 632 172 6 0 chr13 54497830 54498004 -65786308 + CT-rich Low_complexity Low_complexity 2 176 0 8 1000 541 210 0 0 chr13 54498008 54498108 -65786204 - PB1D9 SINE Alu -19 101 2 8 1000 1068 289 34 63 chr13 54498109 54498489 -65785823 + MTEa LTR MaLR 3 371 -8 8 1000 488 333 80 11 chr13 54499217 54499405 -65784907 + MLT1K LTR MaLR 78 278 -317 8 1000 398 242 42 0 chr13 54499803 54499898 -65784414 + RSINE1 SINE B4 3 101 -64 8 1000 260 203 45 45 chr13 54500105 54500172 -65784140 - Tigger5 DNA MER2_type -1 2405 2339 1 1000 326 275 37 24 chr13 54500183 54500265 -65784047 + RSINE1 SINE B4 3 85 -80 2 1000 414 0 0 0 chr13 54500283 54500329 -65783983 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1000 294 29 0 0 chr13 54500394 54500429 -65783883 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 4 1000 327 379 86 0 chr13 54500525 54500665 -65783647 - Tigger5 DNA MER2_type -2224 182 31 1 1000 726 301 24 5 chr13 54500866 54501076 -65783236 - MTEa LTR MaLR 0 379 166 5 1000 1249 48 0 0 chr13 54501088 54501235 -65783077 + B1_Mus2 SINE Alu 1 147 0 6 1000 291 85 0 0 chr13 54501235 54501282 -65783030 + (A)n Simple_repeat Simple_repeat 1 47 0 7 1000 1060 218 0 20 chr13 54501300 54501497 -65782815 - B3 SINE B2 -19 197 5 8 1000 653 285 23 0 chr13 54501523 54501695 -65782617 - MTEa LTR MaLR -200 179 4 5 1000 662 279 31 5 chr13 54501721 54501912 -65782400 + B3A SINE B2 3 198 0 9 1000 255 196 324 9 chr13 54502720 54502828 -65781484 - L1MB3 LINE L1 -192 5991 5850 1 1000 1776 176 18 3 chr13 54502859 54503189 -65781123 + Lx LINE L1 6320 6654 0 1 1000 1134 51 0 14 chr13 54503193 54503332 -65780980 + B1_Mm SINE Alu 1 137 -10 1 1000 398 312 26 36 chr13 54503397 54503590 -65780722 - L1MB3 LINE L1 -411 5760 5570 1 1000 391 244 58 58 chr13 54503862 54504001 -65780311 - MLT1A1 LTR MaLR -12 396 258 1 1000 258 32 0 0 chr13 54504431 54504462 -65779850 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1000 414 0 0 0 chr13 54505506 54505552 -65778760 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1000 340 300 145 62 chr13 54505725 54505967 -65778345 + MLT1K LTR MaLR 300 561 -34 1 1000 16136 130 34 47 chr13 54506142 54507682 -65776630 - Lx5 LINE L1 -164 6886 5288 1 1000 1098 124 39 11 chr13 54507682 54507862 -65776450 - B2_Mm2 SINE B2 -2 193 9 1 1000 16136 130 34 47 chr13 54507862 54508771 -65775541 - Lx5 LINE L1 -164 5287 4343 1 1000 1067 93 0 0 chr13 54508771 54508910 -65775402 - B1_Mus2 SINE Alu -6 141 3 1 1000 16136 125 40 73 chr13 54508910 54509771 -65774541 - Lx5 LINE L1 -1535 4342 3471 1 1000 281 47 23 0 chr13 54509771 54509814 -65774498 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 2 1000 16136 125 40 73 chr13 54509814 54510330 -65773982 - Lx5 LINE L1 -2407 3470 2948 1 1000 1452 205 9 24 chr13 54510328 54510753 -65773559 - Lx5 LINE L1 -6406 1322 838 1 1000 367 238 38 0 chr13 54510800 54510880 -65773432 - Lx8 LINE L1 -166 7307 7225 2 1000 738 340 137 20 chr13 54511028 54511430 -65772882 + LTR16A LTR ERVL 1 449 -2 2 1000 258 287 172 0 chr13 54511928 54512050 -65772262 + HERV16-int LTR ERVL 785 927 -4069 2 1000 684 324 61 61 chr13 54512347 54512527 -65771785 - MER2 DNA MER2_type 0 345 164 2 1000 4106 44 0 0 chr13 54512527 54513002 -65771310 + MT2C_Mm LTR ERVL 1 475 0 2 1000 684 324 61 61 chr13 54513002 54513166 -65771146 - MER2 DNA MER2_type -182 163 2 2 1000 1658 152 24 54 chr13 54514503 54514837 -65769475 + ORR1A4 LTR MaLR 1 324 -5 2 1000 309 324 65 14 chr13 54514913 54515051 -65769261 + L2 LINE L2 2530 2674 -745 2 1000 246 223 104 35 chr13 54515273 54515417 -65768895 + L1MA8 LINE L1 5867 6020 -280 2 1000 793 139 71 28 chr13 54515446 54515587 -65768725 + B1_Mur3 SINE Alu 3 149 0 2 1000 357 235 65 8 chr13 54515590 54515731 -65768581 + L1MA8 LINE L1 6026 6174 -138 2 1000 418 139 126 11 chr13 54515998 54516085 -65768227 - MTE-int LTR MaLR -1450 130 34 3 1000 1198 232 57 63 chr13 54516083 54516400 -65767912 - MTEa LTR MaLR -29 350 32 3 1000 2275 154 65 5 chr13 54516400 54516772 -65767540 - ORR1B1 LTR MaLR 0 394 1 3 1000 1198 232 57 63 chr13 54516772 54516789 -65767523 - MTEa LTR MaLR -348 31 18 3 1000 1698 314 47 61 chr13 54516867 54517187 -65767125 + L1M2 LINE L1 4125 4431 -1712 3 1000 769 156 96 0 chr13 54517187 54517322 -65766990 + B1_Mur1 SINE Alu 2 149 0 3 1000 1698 314 47 61 chr13 54517322 54518098 -65766214 + L1M2 LINE L1 4432 5206 -937 3 1000 218 254 16 16 chr13 54518098 54518162 -65766150 + B4 SINE B4 1 64 -228 3 1000 387 41 0 0 chr13 54518283 54518332 -65765980 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1000 747 269 129 28 chr13 54518352 54518740 -65765572 + L1M2 LINE L1 5171 5627 -562 3 1000 1248 80 86 0 chr13 54519085 54519260 -65765052 - B2_Mm2 SINE B2 -3 192 3 3 1000 453 266 7 86 chr13 54519536 54519688 -65764624 + RSINE1 SINE B4 4 143 -22 3 1000 306 125 0 0 chr13 54519689 54519737 -65764575 + (TC)n Simple_repeat Simple_repeat 1 48 0 3 1000 783 115 0 0 chr13 54519807 54519937 -65764375 + (GGAA)n Simple_repeat Simple_repeat 2 131 0 4 1000 560 219 17 9 chr13 54520972 54521087 -65763225 + PB1D10 SINE Alu 1 116 -1 4 1000 396 0 0 0 chr13 54521217 54521261 -65763051 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1000 2346 100 3 12 chr13 54522369 54522704 -65761608 - IAPLTR1a_Mm LTR ERVK -5 332 1 4 1000 6303 36 4 12 chr13 54522706 54523456 -65760856 - IAPEz-int LTR ERVK -2 6479 5736 4 1000 1920 66 86 0 chr13 54523455 54523711 -65760601 - IAPEz-int LTR ERVK -4845 1636 1359 4 1000 3342 65 28 16 chr13 54523711 54524274 -65760038 - IAPEz-int LTR ERVK -5819 662 168 4 1000 255 244 0 0 chr13 54524274 54524319 -65759993 - RLTR27 LTR ERVK -34 275 231 4 1000 285 83 0 0 chr13 54524319 54524355 -65759957 - IAPEz-int LTR ERVK -7401 180 145 4 1000 234 267 0 0 chr13 54524355 54524400 -65759912 - RLTR27 LTR ERVK -34 275 231 4 1000 285 83 0 0 chr13 54524400 54524436 -65759876 - IAPEz-int LTR ERVK -7401 180 145 4 1000 239 321 0 0 chr13 54524436 54524492 -65759820 - RLTR27 LTR ERVK -34 275 220 4 1000 508 105 16 167 chr13 54524492 54524618 -65759694 - IAPEz-int LTR ERVK -6369 112 6 4 1000 2302 112 3 12 chr13 54524618 54524953 -65759359 - IAPLTR1a_Mm LTR ERVK -5 332 1 4 1000 317 301 20 10 chr13 54525056 54525170 -65759142 - MLT1A0 LTR MaLR -269 139 25 4 1000 996 238 19 14 chr13 54525244 54525457 -65758855 + B3 SINE B2 1 214 -2 4 1000 22 0 0 0 chr13 54525461 54525483 -65758829 + AT_rich Low_complexity Low_complexity 1 22 0 4 15 820 226 137 0 chr13 54525864 54526054 -65758258 + B3 SINE B2 1 216 0 5 1001 30 0 0 0 chr13 54526054 54526084 -65758228 + AT_rich Low_complexity Low_complexity 1 30 0 5 1001 377 311 0 62 chr13 54526127 54526271 -65758041 + MER2 DNA MER2_type 92 226 -119 5 1001 835 144 13 0 chr13 54527139 54527292 -65757020 + CT-rich Low_complexity Low_complexity 3 157 0 5 1001 24 0 0 0 chr13 54527427 54527451 -65756861 + AT_rich Low_complexity Low_complexity 1 24 0 5 1001 532 212 253 13 chr13 54527460 54527618 -65756694 - B3A SINE B2 0 198 3 5 1001 370 372 91 44 chr13 54527731 54528049 -65756263 - L1MC4a LINE L1 -2016 5866 5534 5 1001 234 0 0 0 chr13 54528199 54528225 -65756087 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 5 1001 275 221 61 31 chr13 54528572 54528670 -65755642 - MLT1K LTR MaLR -109 486 386 5 1001 1636 131 156 29 chr13 54529537 54529851 -65754461 - ORR1B1 LTR MaLR 0 394 41 5 1001 315 321 112 52 chr13 54529992 54530225 -65754087 - ORR1E LTR MaLR -107 252 6 6 1001 727 154 89 0 chr13 54530638 54530747 -65753565 + B1_Mur3 SINE Alu 11 130 -19 6 1001 383 0 21 0 chr13 54530747 54530794 -65753518 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1001 727 154 89 0 chr13 54530794 54530807 -65753505 + B1_Mur3 SINE Alu 131 143 -6 6 1001 832 278 38 25 chr13 54530832 54531068 -65753244 - 7SK RNA RNA -92 239 1 6 1001 549 0 0 0 chr13 54531330 54531391 -65752921 + (TC)n Simple_repeat Simple_repeat 1 61 0 6 1001 316 281 16 58 chr13 54532926 54533047 -65751265 + L1MC LINE L1 5080 5195 -951 6 1001 21 57 0 0 chr13 54533377 54533412 -65750900 + AT_rich Low_complexity Low_complexity 1 35 0 6 1001 381 200 10 65 chr13 54533412 54533538 -65750774 + L1MB8 LINE L1 5879 5995 -189 6 1001 1232 54 0 0 chr13 54533551 54533698 -65750614 + B1_Mus1 SINE Alu 2 148 0 6 1001 282 180 0 0 chr13 54533699 54533760 -65750552 + GA-rich Low_complexity Low_complexity 2 62 0 6 1001 311 311 141 28 chr13 54534666 54534921 -65749391 + L2a LINE L2 3100 3383 -43 7 1001 202 222 0 22 chr13 54536333 54536379 -65747933 + GA-rich Low_complexity Low_complexity 3 47 0 7 1001 2373 182 96 18 chr13 54536701 54537192 -65747120 - RLTR24 LTR ERV1 0 529 1 7 1001 424 255 38 0 chr13 54537233 54537339 -65746973 + L1MEc LINE L1 77 186 -6214 7 1001 1395 68 23 0 chr13 54537436 54537613 -65746699 + B2_Mm2 SINE B2 1 181 -14 7 1001 210 195 24 0 chr13 54537637 54537678 -65746634 + B4 SINE B4 41 82 -210 7 1001 447 55 0 0 chr13 54537642 54537697 -65746615 + B2_Mm2 SINE B2 47 101 -94 7 1001 423 52 0 0 chr13 54537715 54537773 -65746539 + (TAAA)n Simple_repeat Simple_repeat 4 61 0 7 1001 492 32 0 0 chr13 54537790 54537852 -65746460 + (CAGAGA)n Simple_repeat Simple_repeat 3 64 0 7 1001 538 335 119 8 chr13 54537954 54538450 -65745862 + L1MEc LINE L1 516 1066 -5334 7 1001 1265 173 5 14 chr13 54538935 54539146 -65745166 + B3 SINE B2 2 210 -6 7 1001 234 284 32 63 chr13 54539154 54539312 -65745000 + L1MEc LINE L1 1772 1924 -4476 7 1001 271 304 25 0 chr13 54539402 54539481 -65744831 + RMER1C Other Other 728 808 -534 8 1001 906 295 106 53 chr13 54539526 54540055 -65744257 - L1M2 LINE L1 -1135 5008 4452 8 1001 782 295 42 21 chr13 54540137 54540424 -65743888 - RMER15-int LTR ERVL -210 4789 4497 8 1001 743 291 33 118 chr13 54540575 54540941 -65743371 - RMER15-int LTR ERVL -519 4480 4146 8 1001 1185 308 194 40 chr13 54541007 54542367 -65741945 - RMER15-int LTR ERVL -2619 2380 813 8 1001 1096 332 26 14 chr13 54542444 54542868 -65741444 - RMER15-int LTR ERVL -4297 702 274 8 1001 420 284 177 20 chr13 54543146 54543344 -65740968 - RMER15 LTR ERVL -72 503 275 8 1001 611 208 30 61 chr13 54543343 54543507 -65740805 - RMER15 LTR ERVL -416 159 1 8 1001 333 136 17 0 chr13 54543621 54543680 -65740632 - L1MC4a LINE L1 -75 7807 7748 8 1001 248 274 16 0 chr13 54544783 54544845 -65739467 + G-rich Low_complexity Low_complexity 4 66 0 8 1001 316 141 0 15 chr13 54545697 54545762 -65738550 + (CTGGGG)n Simple_repeat Simple_repeat 3 66 0 8 1001 277 219 293 0 chr13 54545872 54545954 -65738358 + URR1A DNA MER1_type 1 106 -120 8 1001 493 260 58 32 chr13 54546289 54546444 -65737868 - MTEa LTR MaLR -114 265 107 8 1001 1016 64 53 15 chr13 54546445 54546607 -65737705 + B2_Mm2 SINE B2 3 159 -34 8 1001 936 91 0 0 chr13 54546607 54546739 -65737573 + (GAAA)n Simple_repeat Simple_repeat 3 134 0 8 1001 306 0 0 0 chr13 54546860 54546894 -65737418 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 1001 263 239 53 53 chr13 54546916 54546991 -65737321 - MIR SINE MIR -182 80 6 9 1001 866 271 148 41 chr13 54547189 54547528 -65736784 + MTEa LTR MaLR 5 379 0 9 1001 534 260 148 112 chr13 54547669 54547946 -65736366 - B4 SINE B4 -4 288 2 9 1001 300 309 115 0 chr13 54548737 54548876 -65735436 - MIRb SINE MIR -29 239 85 9 1001 886 55 0 23 chr13 54549104 54549235 -65735077 + (TCTCCC)n Simple_repeat Simple_repeat 5 132 0 9 1001 424 223 64 0 chr13 54549971 54550065 -65734247 - RCHARR1 DNA MER1_type -2 972 873 9 1001 550 235 0 10 chr13 54550097 54550196 -65734116 - PB1D9 SINE Alu -21 99 2 9 1001 2475 231 117 17 chr13 54550196 54550914 -65733398 - RCHARR1 DNA MER1_type -121 853 64 9 1001 2324 98 6 3 chr13 54551008 54551334 -65732978 + ORR1A2 LTR MaLR 1 327 0 9 1001 801 260 96 25 chr13 54551334 54551607 -65732705 - Lx8 LINE L1 -99 7374 7082 9 1001 189 252 178 37 chr13 54551872 54551979 -65732333 + L2c LINE L2 3074 3195 -192 1 1001 3346 52 0 17 chr13 54552084 54552498 -65731814 + MTB_Mm LTR MaLR 1 407 0 1 1001 751 247 107 42 chr13 54553121 54553554 -65730758 - RLTR15 LTR ERVK -27 332 1 1 1001 741 161 0 0 chr13 54553638 54553750 -65730562 - B1_Mur2 SINE Alu 0 149 38 1 1001 324 0 0 0 chr13 54553859 54553895 -65730417 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1001 1247 41 0 0 chr13 54553895 54554042 -65730270 - B1_Mus2 SINE Alu 0 147 1 1 1001 1827 203 134 15 chr13 54554173 54554649 -65729663 - MT2A LTR ERVL 0 533 1 1 1001 264 284 0 58 chr13 54555589 54555675 -65728637 + ID4 SINE ID 1 81 -2 1 1001 970 226 126 56 chr13 54555774 54556116 -65728196 + ORR1D2 LTR MaLR 5 370 0 1 1001 284 242 91 0 chr13 54556405 54556471 -65727841 + ID4 SINE ID 12 83 0 1 1001 314 194 14 0 chr13 54556762 54556834 -65727478 + CT-rich Low_complexity Low_complexity 2 74 0 1 1001 300 306 68 20 chr13 54556839 54556986 -65727326 - HAL1-3A_ME LINE L1 -421 2437 2284 1 1001 245 197 16 0 chr13 54556989 54557050 -65727262 + CT-rich Low_complexity Low_complexity 1 62 0 1 1001 788 216 73 10 chr13 54557522 54557714 -65726598 - B3 SINE B2 -12 204 1 1 1001 368 242 89 20 chr13 54558082 54558183 -65726129 - PB1D9 SINE Alu -12 108 1 1 1001 733 154 17 0 chr13 54558425 54558542 -65725770 + B1_Mus2 SINE Alu 29 147 0 1 1001 497 302 8 8 chr13 54559206 54559336 -65724976 - RSINE1 SINE B4 -35 130 1 1 1001 1383 207 62 32 chr13 54559369 54559708 -65724604 - RLTR30 LTR ERV1 -2 377 29 1 1001 333 312 31 0 chr13 54559723 54559819 -65724493 + PB1D10 SINE Alu 10 108 -9 1 1001 180 279 127 32 chr13 54559899 54560025 -65724287 + L4 LINE RTE 1881 2018 -11 1 1001 2540 157 16 80 chr13 54560378 54560938 -65723374 + MT2A LTR ERVL 2 525 -8 1 1001 204 40 0 0 chr13 54561047 54561072 -65723240 + (CTGGGG)n Simple_repeat Simple_repeat 5 29 0 1 1001 202 140 0 23 chr13 54561170 54561214 -65723098 + T-rich Low_complexity Low_complexity 1 43 0 1 1001 992 223 19 14 chr13 54562074 54562283 -65722029 + B3 SINE B2 1 210 -6 1 1001 2222 167 16 37 chr13 54562711 54563140 -65721172 + MTC LTR MaLR 2 421 0 1 1001 238 319 14 14 chr13 54563487 54563557 -65720755 + RSINE1 SINE B4 1 70 -95 1 1001 545 262 273 23 chr13 54563747 54564050 -65720262 + MTE2a LTR MaLR 1 379 0 1 1001 246 229 0 0 chr13 54564088 54564138 -65720174 + Lx9 LINE L1 5857 5906 -1567 1 1001 496 250 56 0 chr13 54564288 54564396 -65719916 + B1_Mur2 SINE Alu 23 136 -13 1 1001 216 0 0 0 chr13 54564396 54564420 -65719892 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1 1001 1268 14 7 0 chr13 54564453 54564598 -65719714 - B1_Mm SINE Alu 0 147 2 1 1001 4406 146 127 17 chr13 54565638 54566441 -65717871 + RMER19B LTR ERVK 1 891 -11 1 1001 825 148 224 17 chr13 54566746 54566925 -65717387 + B3 SINE B2 1 216 0 1 1001 1089 158 68 15 chr13 54566947 54567152 -65717160 + B3 SINE B2 1 216 0 1 1001 835 169 0 14 chr13 54568110 54568248 -65716064 + B1_Mus1 SINE Alu 1 136 -12 1 1001 225 196 0 0 chr13 54568259 54568305 -65716007 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 1 1001 588 250 55 27 chr13 54568332 54568491 -65715821 + B3 SINE B2 1 154 -39 1 1001 255 61 0 0 chr13 54568491 54568524 -65715788 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1001 395 268 66 87 chr13 54568524 54568560 -65715752 + B2_Mm1t SINE B2 155 191 -2 1 1001 2189 112 19 6 chr13 54568565 54568887 -65715425 - ORR1A3 LTR MaLR 0 326 1 1 1001 1041 75 13 27 chr13 54570382 54570532 -65713780 - B1_Mus1 SINE Alu 0 148 1 1 1001 1258 27 0 0 chr13 54570804 54570951 -65713361 + B1_Mm SINE Alu 1 147 0 1 1001 351 65 0 0 chr13 54570951 54570997 -65713315 + (A)n Simple_repeat Simple_repeat 1 46 0 1 1001 751 124 0 0 chr13 54571075 54571188 -65713124 - B1_Mur4 SINE Alu 0 150 38 1 1001 225 277 10 78 chr13 54571097 54571199 -65713113 - RLTR25B LTR ERVK -507 521 427 1 1001 978 222 24 15 chr13 54571464 54571670 -65712642 + B4 SINE B4 85 292 0 1 1001 184 273 91 0 chr13 54571873 54571917 -65712395 + L2c LINE L2 3335 3382 -5 1 1001 822 181 0 0 chr13 54572017 54572150 -65712162 - B1_Mus2 SINE Alu -14 133 1 1 1001 664 284 16 10 chr13 54572193 54572385 -65711927 + B3A SINE B2 6 198 0 1 1001 200 338 65 0 chr13 54572964 54573041 -65711271 - MIRc SINE MIR -118 150 69 1 1001 897 144 14 0 chr13 54573070 54573216 -65711096 - B1_Mus1 SINE Alu 0 148 1 1 1001 429 20 0 0 chr13 54573231 54573281 -65711031 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1001 1179 66 0 7 chr13 54573281 54573433 -65710879 - B2_Mm2 SINE B2 -43 152 2 1 1001 795 150 84 34 chr13 54573434 54573613 -65710699 - B2_Mm2 SINE B2 -6 189 2 1 1001 1496 48 16 5 chr13 54573711 54573901 -65710411 + B2_Mm1a SINE B2 2 193 0 1 1001 2149 125 98 22 chr13 54574837 54574954 -65709358 - MTC LTR MaLR 0 421 296 1 1001 2184 213 3 55 chr13 54574954 54575536 -65708776 - RLTR31_Mur LTR ERVK -1 552 1 1 1001 2149 125 98 22 chr13 54575536 54575785 -65708527 - MTC LTR MaLR -126 295 28 1 1001 314 239 87 0 chr13 54575982 54576074 -65708238 - RLTR14-int LTR ERV1 -1439 3878 3779 1 1001 553 123 57 81 chr13 54576137 54576261 -65708051 - RMER16 LTR ERVK -412 121 1 1 1001 1382 79 11 0 chr13 54576868 54577058 -65707254 - B2_Mm1a SINE B2 0 193 2 1 1001 343 311 45 62 chr13 54577123 54577366 -65706946 - RLTR15 LTR ERVK -80 279 41 1 1001 1480 53 11 16 chr13 54577541 54577732 -65706580 + B2_Mm1t SINE B2 2 191 -2 1 1001 1388 56 84 0 chr13 54578076 54578093 -65706219 - B2_Mm2 SINE B2 0 195 179 1 1001 216 0 0 0 chr13 54578093 54578117 -65706195 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 1001 1388 56 84 0 chr13 54578117 54578278 -65706034 - B2_Mm2 SINE B2 -17 178 4 1 1001 791 138 52 37 chr13 54578312 54578448 -65705864 - B1_Mm SINE Alu -1 146 9 1 1001 341 274 57 57 chr13 54578338 54578462 -65705850 - MT2B LTR ERVL -323 278 155 1 1001 376 248 108 36 chr13 54578852 54579019 -65705293 - MuLV-int LTR ERV1 -6236 1370 1192 1 1001 408 40 0 0 chr13 54579584 54579634 -65704678 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1001 222 37 0 0 chr13 54580399 54580426 -65703886 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1001 1644 31 0 25 chr13 54580471 54580668 -65703644 - B2_Mm1t SINE B2 0 193 2 1 1001 1266 190 152 34 chr13 54580723 54581045 -65703267 + ORR1B1-int LTR MaLR 1000 1359 -150 1 1001 897 135 31 31 chr13 54581671 54581832 -65702480 + B2_Mm2 SINE B2 3 163 -32 1 1001 186 43 0 0 chr13 54581832 54581855 -65702457 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 1 1001 1117 99 0 0 chr13 54581959 54582101 -65702211 - B1_Mus1 SINE Alu -6 142 1 1 1001 625 271 0 20 chr13 54582277 54582424 -65701888 + ID_B1 SINE B4 79 222 -2 1 1001 529 302 19 32 chr13 54583148 54583302 -65701010 - B4A SINE B4 -114 178 27 1 1001 1240 54 0 0 chr13 54583312 54583460 -65700852 - B1_Mus1 SINE Alu 0 148 1 1 1001 1174 61 0 7 chr13 54583605 54583753 -65700559 - B1_Mm SINE Alu 0 147 1 1 1001 453 19 0 0 chr13 54583950 54584004 -65700308 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 1 1001 1173 213 117 212 chr13 54584214 54584803 -65699509 - MT2A LTR ERVL 0 533 1 1 1001 2409 149 24 183 chr13 54584818 54585049 -65699263 + RMER15 LTR ERVL 56 289 -286 1 1001 989 58 0 0 chr13 54585049 54585187 -65699125 + L1Md_F2 LINE L1 6445 6582 0 1 1001 2409 149 24 183 chr13 54585187 54585365 -65698947 + RMER15 LTR ERVL 290 369 -206 1 1001 2924 38 12 0 chr13 54585365 54585707 -65698605 + ORR1A1 LTR MaLR 1 346 0 1 1001 10697 109 94 76 chr13 54585707 54587632 -65696680 + ORR1A1-int LTR MaLR 1 1960 -3 1 1001 2912 46 3 0 chr13 54587632 54587975 -65696337 + ORR1A1 LTR MaLR 1 346 0 1 1001 2409 149 24 183 chr13 54587975 54588180 -65696132 + RMER15 LTR ERVL 370 573 -2 1 1001 306 182 0 0 chr13 54588391 54588457 -65695855 + CT-rich Low_complexity Low_complexity 1 66 0 1 1001 725 217 14 27 chr13 54588504 54588651 -65695661 - B1_Mm SINE Alu -1 146 2 1 1001 727 192 86 57 chr13 54588679 54588889 -65695423 + B3 SINE B2 1 216 0 1 1001 198 0 0 0 chr13 54589165 54589187 -65695125 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1001 196 345 54 22 chr13 54589816 54589908 -65694404 - MIR SINE MIR -57 205 111 1 1001 2434 86 30 3 chr13 54589917 54590254 -65694058 + ORR1A1 LTR MaLR 1 346 0 1 1001 415 277 44 18 chr13 54590268 54590382 -65693930 + RSINE1 SINE B4 41 157 -8 1 1001 736 210 260 38 chr13 54590505 54590659 -65693653 + RMER10A LTR ERVL 1 163 -279 1 1001 267 31 0 0 chr13 54590659 54590691 -65693621 + (TTCCC)n Simple_repeat Simple_repeat 5 36 0 1 1001 736 210 260 38 chr13 54590691 54590878 -65693434 + RMER10A LTR ERVL 164 418 -24 1 1001 400 320 55 0 chr13 54590908 54591089 -65693223 + L1M4 LINE L1 5622 5812 -366 1 1001 281 331 27 34 chr13 54591193 54591340 -65692972 - L2 LINE L2 -1121 2298 2153 1 1001 384 285 193 21 chr13 54591648 54591788 -65692524 - MLT1F1 LTR MaLR -42 527 364 1 1001 379 222 66 11 chr13 54591800 54591891 -65692421 - MLT1F1 LTR MaLR -342 227 132 1 1001 351 0 0 0 chr13 54592433 54592472 -65691840 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1001 269 109 18 0 chr13 54592723 54592778 -65691534 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1001 1078 68 0 0 chr13 54593289 54593422 -65690890 + B1_Mus1 SINE Alu 1 133 -15 1 1001 301 200 319 43 chr13 54593431 54593525 -65690787 + PB1D9 SINE Alu 1 120 0 1 1001 216 0 0 0 chr13 54593841 54593865 -65690447 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1 1001 321 179 16 17 chr13 54593880 54593948 -65690364 - B2_Mm2 SINE B2 -80 118 46 1 1001 513 117 13 0 chr13 54593977 54594054 -65690258 - B2_Mm1t SINE B2 -115 78 1 2 1001 699 191 8 0 chr13 54594112 54594243 -65690069 + B1_Mur2 SINE Alu 11 142 -7 2 1001 710 257 20 36 chr13 54594554 54594767 -65689545 - B3 SINE B2 -2 193 1 2 1001 444 242 20 0 chr13 54594937 54595090 -65689222 + (TA)n Simple_repeat Simple_repeat 2 157 0 2 1001 36 0 0 0 chr13 54595498 54595534 -65688778 + AT_rich Low_complexity Low_complexity 1 36 0 2 1001 370 268 83 14 chr13 54596726 54596870 -65687442 - RMER15 LTR ERVL 0 575 422 2 1001 2213 152 27 39 chr13 54596943 54597311 -65687001 + MTB_Mm LTR MaLR 1 364 -43 2 1001 1147 88 0 0 chr13 54597311 54597459 -65686853 - B1_Mus1 SINE Alu 0 148 1 2 1001 2213 152 27 39 chr13 54597459 54597502 -65686810 + MTB_Mm LTR MaLR 365 407 0 2 1001 3420 38 2 0 chr13 54597593 54597988 -65686324 - MTA_Mm LTR MaLR 0 396 1 2 1001 192 77 0 0 chr13 54598106 54598132 -65686180 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1001 732 101 0 0 chr13 54598132 54598231 -65686081 - B2_Mm1t SINE B2 -33 160 62 2 1001 912 50 0 8 chr13 54598227 54598347 -65685965 + MTB_Mm LTR MaLR 67 185 -222 2 1001 259 128 111 58 chr13 54598332 54598408 -65685904 - B2_Mm1t SINE B2 -139 77 2 2 1001 225 205 130 43 chr13 54598418 54598510 -65685802 - L1M3 LINE L1 -281 5899 5800 2 1001 596 183 0 0 chr13 54598633 54598737 -65685575 - B1_Mur3 SINE Alu -20 129 26 2 1001 438 293 28 14 chr13 54598857 54598999 -65685313 - B1F2 SINE Alu -1 148 5 2 1001 344 337 0 0 chr13 54600637 54600726 -65683586 + MLT1A LTR MaLR 7 95 -279 2 1001 834 226 74 33 chr13 54600729 54600944 -65683368 - MTD LTR MaLR 0 419 196 2 1001 1613 37 11 0 chr13 54601496 54601686 -65682626 - B2_Mm1a SINE B2 0 193 2 2 1001 858 236 66 10 chr13 54601686 54601883 -65682429 - MTD LTR MaLR -209 210 3 2 1001 480 306 72 55 chr13 54601899 54602050 -65682262 + MLT1A LTR MaLR 137 283 -107 2 1001 2994 29 0 17 chr13 54602050 54602402 -65681910 - ORR1A1 LTR MaLR 0 346 1 2 1001 480 276 75 50 chr13 54602402 54602483 -65681829 + MLT1A LTR MaLR 268 355 -19 2 1001 252 0 0 0 chr13 54602537 54602565 -65681747 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1001 353 287 10 21 chr13 54602565 54602661 -65681651 - PB1D10 SINE Alu -13 104 10 2 1001 1113 212 30 0 chr13 54603198 54603401 -65680911 + B3 SINE B2 1 209 -7 2 1001 419 0 20 0 chr13 54603582 54603633 -65680679 + (TG)n Simple_repeat Simple_repeat 2 53 0 2 1001 225 208 39 0 chr13 54603756 54603833 -65680479 + CT-rich Low_complexity Low_complexity 6 85 0 2 1001 510 311 31 47 chr13 54603895 54604087 -65680225 + MER5A DNA MER1_type 1 189 0 2 1001 363 307 55 8 chr13 54604478 54604606 -65679706 + L1MC LINE L1 5531 5664 -2218 2 1001 210 191 24 0 chr13 54604924 54604966 -65679346 + CT-rich Low_complexity Low_complexity 2 44 0 2 1001 2112 177 42 25 chr13 54606238 54606644 -65677668 - MTC LTR MaLR -8 413 1 2 1001 1091 112 0 0 chr13 54606741 54606884 -65677428 - B1_Mus1 SINE Alu -5 143 1 2 1001 3014 151 60 86 chr13 54607250 54607367 -65676945 - L1_Mur3 LINE L1 -585 5295 5080 2 1001 666 199 30 0 chr13 54607367 54607498 -65676814 + B1_Mur4 SINE Alu 2 136 -14 2 1001 3014 158 43 38 chr13 54607498 54607992 -65676320 - L1_Mur3 LINE L1 -801 5079 4582 2 1001 1440 54 43 5 chr13 54607992 54608179 -65676133 + B2_Mm2 SINE B2 1 194 -1 2 1001 3014 158 43 38 chr13 54608179 54608234 -65676078 - L1_Mur3 LINE L1 -1299 4581 4533 2 1001 1269 34 0 0 chr13 54608234 54608381 -65675931 - B1_Mus2 SINE Alu 0 147 1 2 1001 3014 158 43 38 chr13 54608381 54608460 -65675852 - L1_Mur3 LINE L1 -1348 4532 4446 2 1001 899 156 146 5 chr13 54608477 54608683 -65675629 - L1_Mur3 LINE L1 -7415 313 79 2 1001 795 177 13 20 chr13 54608696 54608846 -65675466 - B1_Mur4 SINE Alu -1 149 1 2 1001 480 320 119 45 chr13 54608896 54609207 -65675105 + L1MEf LINE L1 1072 1425 -4990 2 1001 313 140 53 0 chr13 54609295 54609352 -65674960 - L1_Mur3 LINE L1 -7583 129 70 2 1001 276 294 185 0 chr13 54609360 54609544 -65674768 + L1MEf LINE L1 1659 1876 -4524 2 1001 2315 50 0 0 chr13 54609554 54609832 -65674480 - L1_Mus1 LINE L1 0 6567 6290 2 1001 706 190 28 38 chr13 54609864 54610035 -65674277 + B3 SINE B2 18 195 0 2 1001 279 320 120 0 chr13 54610076 54610176 -65674136 + PB1D7 SINE Alu 9 120 0 2 1001 1240 70 6 0 chr13 54610182 54610339 -65673973 + B2_Mm1t SINE B2 3 160 -33 2 1001 255 31 0 0 chr13 54610339 54610371 -65673941 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2 1001 1450 214 81 78 chr13 54610376 54610797 -65673515 - RLTR18B LTR ERVK -90 422 1 2 1001 1221 103 80 0 chr13 54611032 54611207 -65673105 + B2_Mm2 SINE B2 5 193 -2 2 1001 341 257 14 0 chr13 54611535 54611609 -65672703 - ID4_ SINE ID -7 76 2 2 1001 360 274 116 0 chr13 54611627 54611722 -65672590 + RLTR18B LTR ERVK 317 422 -90 2 1001 212 0 0 35 chr13 54611727 54611756 -65672556 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 2 1001 436 53 0 0 chr13 54611756 54611813 -65672499 - B2_Mm1t SINE B2 -33 160 104 2 1001 21 0 0 0 chr13 54612230 54612251 -65672061 + AT_rich Low_complexity Low_complexity 1 21 0 2 1001 3234 113 219 2 chr13 54612661 54613218 -65671094 + RLTR33 LTR ERVK 1 678 0 2 1001 288 209 0 69 chr13 54613257 54613329 -65670983 + PB1D9 SINE Alu 2 68 -52 2 1001 2280 142 54 36 chr13 54613305 54613751 -65670561 + RMER6B LTR ERVK 5 458 -3 2 1001 19694 205 95 90 chr13 54613751 54614206 -65670106 + MYSERV6-int LTR ERVK 2 498 -8461 2 1001 1254 20 0 20 chr13 54614206 54614355 -65669957 + B1_Mus2 SINE Alu 2 147 0 2 1001 19694 205 95 90 chr13 54614355 54615028 -65669284 + MYSERV6-int LTR ERVK 499 1213 -7746 2 1001 1456 65 16 5 chr13 54615028 54615213 -65669099 - B2_Mm2 SINE B2 -7 188 2 2 1001 19694 205 95 90 chr13 54615213 54615712 -65668600 + MYSERV6-int LTR ERVK 1214 1731 -7228 2 1001 1449 65 38 0 chr13 54615712 54615896 -65668416 + B2_Mm2 SINE B2 2 192 -3 2 1001 19694 205 95 90 chr13 54615896 54617079 -65667233 + MYSERV6-int LTR ERVK 1732 2926 -6033 2 1001 4065 82 135 10 chr13 54617079 54617680 -65666632 - RLTR33 LTR ERVK -2 676 1 2 1001 21754 116 29 36 chr13 54617680 54619826 -65664486 + MYSERV6-int LTR ERVK 2903 5026 -3933 2 1001 1134 82 0 0 chr13 54619826 54619972 -65664340 + B1_Mus1 SINE Alu 1 146 -2 2 1001 21754 131 40 45 chr13 54619972 54621408 -65662904 + MYSERV6-int LTR ERVK 4902 6464 -2495 2 1001 285 211 0 34 chr13 54621408 54621467 -65662845 + B1_Mus1 SINE Alu 1 57 -91 2 1001 21754 131 40 45 chr13 54621467 54621843 -65662469 + MYSERV6-int LTR ERVK 6465 6875 -2084 2 1001 1068 74 0 0 chr13 54621843 54621978 -65662334 + B1_Mus2 SINE Alu 1 135 -12 2 1001 180 77 0 0 chr13 54621978 54622004 -65662308 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 1001 19694 205 95 90 chr13 54622004 54622899 -65661413 + MYSERV6-int LTR ERVK 6876 7763 -1196 2 1001 1299 44 0 158 chr13 54622960 54623175 -65661137 - B2_Mm2 SINE B2 -14 181 1 2 1001 2252 141 57 92 chr13 54623175 54623652 -65660660 + RMER6B LTR ERVK 1 460 -1 2 1001 354 308 60 20 chr13 54623778 54623927 -65660385 + MIRb SINE MIR 47 201 -67 2 1001 394 202 523 8 chr13 54623976 54624106 -65660206 - B3 SINE B2 -18 198 2 2 1001 1215 48 7 0 chr13 54624863 54625010 -65659302 + B1_Mus1 SINE Alu 1 148 0 2 1001 447 106 0 0 chr13 54625018 54625084 -65659228 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 2 1001 331 299 0 0 chr13 54625125 54625202 -65659110 + ID4 SINE ID 3 79 -4 2 1001 257 309 179 7 chr13 54628167 54628307 -65656005 + MIRb SINE MIR 51 214 -54 2 1001 622 258 45 6 chr13 54628630 54628786 -65655526 + RSINE1 SINE B4 4 165 0 2 1001 516 291 21 28 chr13 54629082 54629227 -65655085 + ID_B1 SINE B4 80 223 -1 2 1001 266 306 0 14 chr13 54630934 54631007 -65653305 + ID4 SINE ID 2 73 -10 2 1001 632 141 0 0 chr13 54631541 54631639 -65652673 + B3 SINE B2 2 99 -117 2 1001 974 205 92 29 chr13 54631639 54631938 -65652374 + ORR1B1 LTR MaLR 1 344 -50 2 1001 1899 208 49 77 chr13 54631831 54632046 -65652266 - ORR1D1-int LTR MaLR -627 743 544 2 1001 1213 21 14 14 chr13 54632046 54632192 -65652120 + B1_Mus2 SINE Alu 2 147 0 2 1001 248 0 0 30 chr13 54632196 54632229 -65652083 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2 1001 1378 68 11 0 chr13 54632238 54632414 -65651898 - B2_Mm1t SINE B2 -14 179 2 2 1001 1899 208 49 77 chr13 54632414 54632752 -65651560 - ORR1D1-int LTR MaLR -827 543 192 2 1001 1028 197 35 47 chr13 54632834 54633090 -65651222 - RLTR18B LTR ERVK -4 508 256 2 1001 730 200 91 50 chr13 54633112 54633333 -65650979 - ORR1D1 LTR MaLR -144 230 1 2 1001 1577 57 5 0 chr13 54633415 54633607 -65650705 + B2_Mm1a SINE B2 1 193 0 2 1001 1139 68 0 46 chr13 54633966 54634119 -65650193 + B1_Mus1 SINE Alu 2 147 -1 2 1001 232 314 0 55 chr13 54634140 54634231 -65650081 + ID_B1 SINE B4 40 125 -99 2 1001 231 114 0 0 chr13 54634386 54634421 -65649891 + (TA)n Simple_repeat Simple_repeat 2 36 0 2 1001 464 350 19 0 chr13 54634440 54634600 -65649712 + RSINE1 SINE B4 3 165 0 2 1001 654 212 7 35 chr13 54634669 54634811 -65649501 - B1_Mus2 SINE Alu -1 146 9 2 1001 464 248 202 84 chr13 54634859 54635097 -65649215 + B4A SINE B4 4 269 -23 2 1001 381 22 0 0 chr13 54635097 54635143 -65649169 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1001 1538 174 73 48 chr13 54635216 54635835 -65648477 - RMER6A LTR ERVK 0 756 1 2 1001 356 280 71 51 chr13 54635945 54636141 -65648171 + L1M2 LINE L1 3198 3397 -2746 2 1001 1375 141 152 95 chr13 54636319 54636728 -65647584 + RMER4A LTR ERVK 33 464 -2 2 1001 367 181 233 0 chr13 54636781 54636897 -65647415 + B1_Mus1 SINE Alu 5 147 -1 2 1001 1221 34 7 0 chr13 54637125 54637271 -65647041 + B1_Mus2 SINE Alu 1 147 0 2 1001 186 133 0 0 chr13 54637271 54637301 -65647011 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1001 424 319 65 70 chr13 54637817 54638155 -65646157 - ORR1E LTR MaLR -48 322 1 2 1001 435 190 58 6 chr13 54638201 54638301 -65646011 + L1_Mur1 LINE L1 5463 5591 -2404 2 1001 886 62 30 23 chr13 54639420 54639553 -65644759 + B1_Mus2 SINE Alu 12 145 -2 2 1001 785 146 13 40 chr13 54639671 54639821 -65644491 - B1_Mur3 SINE Alu -1 148 3 2 1001 270 286 0 104 chr13 54639710 54639835 -65644477 - MT2B LTR ERVL -337 264 153 2 1001 1146 104 6 0 chr13 54640045 54640218 -65644094 - B2_Mm1t SINE B2 0 193 20 2 1001 252 86 0 0 chr13 54641335 54641370 -65642942 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1001 766 213 48 11 chr13 54642032 54642223 -65642089 + B3 SINE B2 1 192 -3 2 1001 225 0 0 0 chr13 54642519 54642544 -65641768 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2 1001 518 256 138 8 chr13 54642554 54642684 -65641628 - B1_Mur1 SINE Alu -2 147 1 3 1001 426 187 25 116 chr13 54642960 54643081 -65641231 + MT2B LTR ERVL 153 262 -339 3 1001 874 155 0 0 chr13 54642979 54643121 -65641191 + B1_Mur4 SINE Alu 9 150 0 3 1001 5283 148 90 19 chr13 54643261 54643475 -65640837 - RMER12 LTR ERVK -157 1165 925 3 1001 3637 45 68 0 chr13 54643475 54643917 -65640395 - MT2C_Mm LTR ERVL 0 475 4 3 1001 327 25 0 0 chr13 54643917 54643957 -65640355 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1001 5283 148 90 19 chr13 54643957 54644825 -65639487 - RMER12 LTR ERVK -398 924 6 3 1001 522 231 19 0 chr13 54645238 54645346 -65638966 + RSINE1 SINE B4 8 117 -48 3 1001 395 305 81 32 chr13 54645434 54645708 -65638604 - L1M4b LINE L1 -1846 5160 4874 3 1001 225 65 0 0 chr13 54645825 54645856 -65638456 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 3 1001 949 117 7 27 chr13 54645856 54645998 -65638314 - B1_Mus2 SINE Alu -7 140 2 3 1001 265 169 91 0 chr13 54646008 54646085 -65638227 - L1M4b LINE L1 -4978 2356 2273 3 1001 3426 23 13 0 chr13 54646128 54646519 -65637793 - MTA_Mm LTR MaLR 0 396 1 3 1001 9098 39 8 1 chr13 54646519 54647609 -65636703 - MTA_Mm-int LTR MaLR 0 1098 1 3 1001 3484 20 2 12 chr13 54647609 54648009 -65636303 - MTA_Mm LTR MaLR 0 396 1 3 1001 243 169 123 49 chr13 54648758 54648839 -65635473 + PB1D10 SINE Alu 25 111 -6 3 1001 780 252 39 5 chr13 54648848 54649051 -65635261 + B3 SINE B2 5 214 -2 3 1001 26 50 0 0 chr13 54649053 54649093 -65635219 + AT_rich Low_complexity Low_complexity 1 40 0 3 1001 437 261 199 6 chr13 54649609 54649790 -65634522 + ID_B1 SINE B4 3 218 -6 3 1001 393 292 77 0 chr13 54649823 54649953 -65634359 - B1F SINE Alu 0 149 10 3 1001 395 198 47 41 chr13 54650094 54650215 -65634097 - MTC LTR MaLR -11 410 266 3 1001 913 81 15 0 chr13 54650226 54650362 -65633950 + (TC)n Simple_repeat Simple_repeat 1 138 0 3 1001 631 164 54 8 chr13 54650406 54650535 -65633777 - MTC LTR MaLR -282 139 5 3 1001 272 224 26 26 chr13 54650575 54650653 -65633659 + L1MC4 LINE L1 7601 7678 -364 3 1001 254 265 165 8 chr13 54650742 54650875 -65633437 + L1MC4 LINE L1 7692 7845 -197 3 1001 497 296 86 0 chr13 54651330 54651492 -65632820 + B3A SINE B2 2 177 -21 3 1001 389 238 24 0 chr13 54651487 54651571 -65632741 - B1_Mus2 SINE Alu -60 87 2 3 1001 26 0 0 0 chr13 54652209 54652235 -65632077 + AT_rich Low_complexity Low_complexity 1 26 0 3 1001 505 175 116 23 chr13 54652948 54653077 -65631235 + B1_Mur2 SINE Alu 6 146 -3 3 1001 291 193 0 66 chr13 54653121 54653182 -65631130 + ID4 SINE ID 16 72 -11 3 1001 778 184 14 7 chr13 54653375 54653523 -65630789 + B1_Mur3 SINE Alu 1 149 0 3 1001 595 192 118 37 chr13 54655639 54655774 -65628538 - B1_Mur2 SINE Alu 0 149 4 3 1001 326 177 78 52 chr13 54655794 54655907 -65628405 - B4A SINE B4 -52 240 132 3 1001 3345 25 98 0 chr13 54655908 54656307 -65628005 - MERVL-int LTR ERVL -3550 1935 1498 3 1001 204 40 0 0 chr13 54656395 54656420 -65627892 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 3 1001 1390 73 20 35 chr13 54656451 54656649 -65627663 - B2_Mm2 SINE B2 0 195 1 3 1001 1128 95 0 0 chr13 54656778 54656926 -65627386 + B1_Mus1 SINE Alu 1 148 0 3 1001 279 79 0 0 chr13 54656928 54656966 -65627346 + (GAAAA)n Simple_repeat Simple_repeat 2 39 0 3 1002 300 272 24 24 chr13 54657027 54657110 -65627202 + ID2 SINE ID 1 83 0 3 1002 646 188 21 57 chr13 54657163 54657304 -65627008 - B1_Mur1 SINE Alu -13 136 1 3 1002 263 254 169 0 chr13 54657337 54657408 -65626904 + PB1D10 SINE Alu 3 85 -32 3 1002 355 140 57 29 chr13 54657412 54657513 -65626799 - B1_Mur1 SINE Alu 0 149 6 3 1002 324 127 55 35 chr13 54658555 54658669 -65625643 - B2_Mm2 SINE B2 0 195 47 3 1002 1294 97 11 0 chr13 54658682 54658858 -65625454 - B2_Mm1t SINE B2 -14 179 2 3 1002 407 266 0 0 chr13 54659313 54659407 -65624905 + B3A SINE B2 2 95 -103 3 1002 212 278 18 18 chr13 54659726 54659781 -65624531 + B1F1 SINE Alu 1 55 -94 3 1002 1051 100 58 58 chr13 54659844 54660035 -65624277 + B2_Mm2 SINE B2 5 195 0 3 1002 617 229 15 0 chr13 54660945 54661076 -65623236 + B1F1 SINE Alu 10 142 -7 3 1002 451 266 37 0 chr13 54661283 54661392 -65622920 + PB1D10 SINE Alu 5 117 0 3 1002 400 169 101 0 chr13 54661483 54661572 -65622740 + MTE2b LTR MaLR 1 98 -281 3 1002 274 340 19 19 chr13 54661551 54661656 -65622656 + MTE2b LTR MaLR 39 143 -236 3 1002 229 250 29 0 chr13 54661669 54661737 -65622575 - ID4_ SINE ID -12 71 2 3 1002 343 249 137 13 chr13 54661746 54661848 -65622464 - B1F SINE Alu -8 141 31 3 1002 216 266 15 15 chr13 54661901 54661966 -65622346 - PB1D10 SINE Alu 0 117 53 3 1002 535 220 15 36 chr13 54663414 54663551 -65620761 - B1F SINE Alu -13 136 3 3 1002 193 292 90 0 chr13 54663763 54663852 -65620460 - MIR SINE MIR -63 145 49 3 1002 587 251 70 11 chr13 54664318 54664503 -65619809 + L1MB7 LINE L1 5969 6164 -20 3 1002 745 61 261 0 chr13 54664927 54665042 -65619270 - B1_Mus1 SINE Alu 0 148 4 3 1002 676 160 8 8 chr13 54665058 54665178 -65619134 + PB1D9 SINE Alu 1 120 0 3 1002 660 186 0 8 chr13 54665225 54665355 -65618957 + B1_Mur3 SINE Alu 20 148 -1 3 1002 554 218 56 14 chr13 54667013 54667157 -65617155 + B3A SINE B2 3 152 -46 3 1002 1368 72 65 31 chr13 54667184 54667413 -65616899 - RLTR9A LTR ERVK -131 237 1 3 1002 593 299 9 54 chr13 54667973 54668163 -65616149 + B3 SINE B2 1 180 -36 3 1002 1417 52 16 10 chr13 54668163 54668356 -65615956 + B2_Mm2 SINE B2 2 195 0 3 1002 593 299 9 54 chr13 54668356 54668388 -65615924 + B3 SINE B2 181 213 -3 3 1002 23 92 0 0 chr13 54668409 54668474 -65615838 + AT_rich Low_complexity Low_complexity 1 65 0 3 1002 476 289 99 53 chr13 54668590 54668781 -65615531 - RMER20B LTR ERVK -223 404 201 3 1002 3139 47 10 15 chr13 54668781 54669190 -65615122 - MTB_Mm LTR MaLR 0 407 1 3 1002 476 289 99 53 chr13 54669190 54669261 -65615051 - RMER20B LTR ERVK -427 200 130 3 1002 641 168 18 0 chr13 54670162 54670275 -65614037 - RLTR14 LTR ERV1 -267 115 1 3 1002 615 209 81 0 chr13 54670275 54670417 -65613895 - B3 SINE B2 -38 178 25 3 1002 779 274 14 19 chr13 54670420 54670636 -65613676 - B3 SINE B2 0 216 2 3 1002 25 31 0 0 chr13 54670639 54670671 -65613641 + AT_rich Low_complexity Low_complexity 1 32 0 3 1002 1305 78 15 20 chr13 54671023 54671219 -65613093 + B2_Mm2 SINE B2 1 195 0 3 1002 240 35 0 0 chr13 54671219 54671248 -65613064 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 3 1002 477 0 0 0 chr13 54671390 54671443 -65612869 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 3 1002 1030 39 46 0 chr13 54671443 54671573 -65612739 - B1_Mus2 SINE Alu -10 137 2 3 1002 1126 69 7 0 chr13 54671723 54671867 -65612445 + B1_Mm SINE Alu 3 147 0 3 1002 636 204 121 0 chr13 54671893 54672025 -65612287 + B3 SINE B2 1 148 -68 3 1002 750 157 8 8 chr13 54672153 54672281 -65612031 - B3 SINE B2 -87 129 2 3 1002 903 253 83 115 chr13 54672331 54672679 -65611633 + RLTR30 LTR ERV1 43 379 0 3 1002 358 253 0 62 chr13 54672779 54672876 -65611436 + B1_Mur1 SINE Alu 58 148 -1 3 1002 732 195 70 61 chr13 54673476 54673689 -65610623 + B3 SINE B2 2 216 0 3 1002 1174 54 0 0 chr13 54673778 54673925 -65610387 + B1_Mus2 SINE Alu 1 147 0 3 1002 324 0 0 0 chr13 54673925 54673961 -65610351 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1002 369 0 0 0 chr13 54674324 54674365 -65609947 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1002 666 283 0 12 chr13 54674366 54674534 -65609778 + B3 SINE B2 5 170 -46 3 1002 886 68 0 82 chr13 54674562 54674756 -65609556 + (GGGAA)n Simple_repeat Simple_repeat 1 178 0 3 1002 730 45 10 106 chr13 54674766 54674964 -65609348 + GA-rich Low_complexity Low_complexity 1 179 0 3 1002 703 158 50 7 chr13 54675019 54675159 -65609153 + URR1B DNA MER1_type 80 225 0 3 1002 643 216 116 45 chr13 54675253 54675452 -65608860 - B3 SINE B2 -3 213 1 3 1002 1169 48 0 7 chr13 54675483 54675631 -65608681 + B1_Mus2 SINE Alu 1 147 0 3 1002 187 263 139 38 chr13 54676124 54676203 -65608109 + MIRm SINE MIR 56 142 -134 3 1002 818 105 0 0 chr13 54677716 54677840 -65606472 - B2_Mm2 SINE B2 -70 125 2 3 1002 300 315 45 27 chr13 54677987 54678098 -65606214 - PB1D10 SINE Alu 0 117 5 3 1002 294 174 3 0 chr13 54678749 54678822 -65605490 + PB1D7 SINE Alu 2 75 -42 3 1002 396 0 0 0 chr13 54679144 54679188 -65605124 + (TC)n Simple_repeat Simple_repeat 2 45 0 3 1002 336 363 76 67 chr13 54679236 54679552 -65604760 + L2b LINE L2 3050 3368 -7 3 1002 243 244 22 55 chr13 54679528 54679619 -65604693 - L2a LINE L2 -7 3419 3332 3 1002 354 202 122 61 chr13 54680527 54680644 -65603668 - PB1D10 SINE Alu -1 148 6 3 1002 1296 78 6 6 chr13 54680898 54681079 -65603233 - B2_Mm2 SINE B2 -14 181 1 3 1002 262 231 167 0 chr13 54681202 54681280 -65603032 - ORR1D1 LTR MaLR 0 374 284 3 1002 553 231 97 15 chr13 54681250 54681413 -65602899 - ORR1D1 LTR MaLR -202 165 1 3 1002 293 176 64 51 chr13 54681598 54681676 -65602636 + RLTR25B LTR ERVK 431 509 -519 3 1002 766 30 0 0 chr13 54681620 54681719 -65602593 + B1_Mus2 SINE Alu 49 147 0 3 1002 192 40 0 0 chr13 54683080 54683105 -65601207 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 3 1002 225 0 0 0 chr13 54683258 54683283 -65601029 + (TCCCC)n Simple_repeat Simple_repeat 1 25 0 3 1002 497 149 53 53 chr13 54683581 54683694 -65600618 - PB1D7 SINE Alu -6 114 2 3 1002 441 183 133 30 chr13 54684892 54685027 -65599285 + B1_Mur2 SINE Alu 1 149 0 3 1002 189 0 0 0 chr13 54686157 54686178 -65598134 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 3 1002 956 128 0 20 chr13 54686330 54686481 -65597831 + B1_Mur4 SINE Alu 3 150 0 4 1002 559 205 265 6 chr13 54686920 54687082 -65597230 + B3 SINE B2 2 205 -11 4 1002 1239 67 44 17 chr13 54687769 54687950 -65596362 + B2_Mm2 SINE B2 1 186 -9 4 1002 903 114 175 0 chr13 54688072 54688238 -65596074 + B2_Mm2 SINE B2 1 195 0 4 1002 246 267 56 90 chr13 54688461 54688536 -65595776 + L1MB2 LINE L1 6030 6101 -70 4 1002 909 151 0 0 chr13 54688536 54688682 -65595630 - B1_Mur4 SINE Alu -2 148 3 4 1002 246 267 56 90 chr13 54688682 54688750 -65595562 + L1MB2 LINE L1 6102 6168 -3 4 1002 372 247 40 30 chr13 54688771 54688871 -65595441 + PB1D9 SINE Alu 20 120 0 4 1002 269 299 0 0 chr13 54689072 54689139 -65595173 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 4 1002 1258 75 16 16 chr13 54689157 54689346 -65594966 + B2_Mm2 SINE B2 1 189 -6 4 1002 992 67 15 0 chr13 54689411 54689545 -65594767 + B1_Mus2 SINE Alu 1 136 -11 4 1002 279 0 0 0 chr13 54689545 54689576 -65594736 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1002 225 0 0 0 chr13 54690507 54690532 -65593780 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1002 1096 81 0 0 chr13 54690543 54690691 -65593621 + B1_Mus1 SINE Alu 1 148 0 4 1002 288 0 0 0 chr13 54690891 54690923 -65593389 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 1002 1063 68 0 58 chr13 54692718 54692873 -65591439 + B1_Mus1 SINE Alu 3 148 0 4 1002 353 267 57 64 chr13 54693649 54693789 -65590523 + MLT1C LTR MaLR 21 159 -231 4 1002 794 139 0 30 chr13 54693852 54693985 -65590327 - B2_Mm2 SINE B2 -66 129 1 4 1002 294 67 0 0 chr13 54694012 54694057 -65590255 + B1_Mur4 SINE Alu 106 150 0 4 1002 603 306 87 62 chr13 54694057 54694346 -65589966 + MLT1C LTR MaLR 171 466 -1 4 1002 199 264 54 27 chr13 54694656 54694730 -65589582 + MIRb SINE MIR 122 197 -71 4 1002 310 255 120 20 chr13 54695645 54695745 -65588567 - B1F1 SINE Alu -39 110 1 4 1002 514 273 77 10 chr13 54696305 54696512 -65587800 + Lx8 LINE L1 6892 7112 -361 4 1002 289 136 0 0 chr13 54696539 54696583 -65587729 + Lx8 LINE L1 7217 7260 -213 4 1002 236 302 11 11 chr13 54696970 54697057 -65587255 + MER5A1 DNA MER1_type 80 166 0 4 1002 773 164 0 58 chr13 54698803 54698958 -65585354 - URR1A DNA MER1_type 0 226 81 4 1002 940 186 88 0 chr13 54700866 54701059 -65583253 + B3 SINE B2 1 210 -6 4 1002 292 263 40 88 chr13 54701307 54701432 -65582880 + MT2B LTR ERVL 139 257 -344 4 1002 779 78 0 17 chr13 54701361 54701479 -65582833 + B1_Mur4 SINE Alu 35 150 0 4 1002 1145 124 0 0 chr13 54701488 54701657 -65582655 + B2_Mm2 SINE B2 2 170 -25 4 1002 236 169 150 63 chr13 54701693 54701785 -65582527 + B2_Mm2 SINE B2 50 171 -22 4 1002 1184 54 0 0 chr13 54701785 54701932 -65582380 + B1_Mm SINE Alu 1 147 0 4 1002 217 186 336 73 chr13 54701932 54701949 -65582363 + B2_Mm1t SINE B2 172 188 -5 4 1002 500 304 35 57 chr13 54702137 54702364 -65581948 - ID_B1 SINE B4 -1 223 2 4 1002 592 195 32 0 chr13 54702457 54702580 -65581732 - RSINE1 SINE B4 -36 129 3 4 1002 227 311 33 22 chr13 54702945 54703037 -65581275 + MER2B DNA MER2_type 239 331 -5 4 1002 842 114 142 25 chr13 54703222 54703384 -65580928 - B2_Mm2 SINE B2 -13 182 2 4 1002 226 233 49 16 chr13 54703464 54703525 -65580787 + ID4_ SINE ID 1 63 -20 4 1002 274 305 142 17 chr13 54703954 54704074 -65580238 - MIRb SINE MIR -76 192 58 4 1002 268 268 28 0 chr13 54704174 54704245 -65580067 - ID4_ SINE ID -10 73 1 4 1002 451 276 55 0 chr13 54704404 54704549 -65579763 - MIRc SINE MIR -72 196 44 4 1002 199 200 0 22 chr13 54704933 54704979 -65579333 + L2c LINE L2 3023 3067 -320 4 1002 276 232 52 2 chr13 54705096 54705199 -65579113 + MIR SINE MIR 135 248 -20 4 1002 186 350 48 32 chr13 54705503 54705627 -65578685 + MIRc SINE MIR 21 146 -122 4 1002 1084 54 0 45 chr13 54706332 54706486 -65577826 + B1_Mus2 SINE Alu 1 147 0 4 1002 206 299 0 8 chr13 54706553 54706671 -65577641 + (CAGGC)n Simple_repeat Simple_repeat 3 119 0 4 1002 226 241 0 18 chr13 54707615 54707670 -65576642 - L1MC LINE L1 -2133 5749 5696 4 1002 211 303 45 12 chr13 54708239 54708357 -65575955 - MIRb SINE MIR -60 208 85 4 1002 525 139 0 0 chr13 54708884 54708970 -65575342 - B1_Mm SINE Alu -1 146 61 4 1002 364 121 2 16 chr13 54709043 54709112 -65575200 - B1_Mus2 SINE Alu -80 69 1 4 1002 342 0 0 0 chr13 54709285 54709323 -65574989 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1002 680 0 12 0 chr13 54709323 54709402 -65574910 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 1002 252 276 126 0 chr13 54711049 54711136 -65573176 + MIR SINE MIR 42 139 -69 4 1002 273 29 0 0 chr13 54711162 54711196 -65573116 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1002 390 290 15 30 chr13 54711202 54711337 -65572975 - RSINE1 SINE B4 -31 134 2 4 1002 23 0 0 0 chr13 54711593 54711616 -65572696 + AT_rich Low_complexity Low_complexity 1 23 0 4 1002 22 0 0 0 chr13 54712650 54712672 -65571640 + GC_rich Low_complexity Low_complexity 1 22 0 4 1002 207 0 0 0 chr13 54713402 54713425 -65570887 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1002 962 91 21 0 chr13 54713425 54713568 -65570744 - B1_Mus1 SINE Alu 0 148 3 4 1002 860 163 7 7 chr13 54713607 54713755 -65570557 - B1_Mur4 SINE Alu 0 150 3 4 1002 336 221 0 0 chr13 54713787 54713864 -65570448 + (TATATG)n Simple_repeat Simple_repeat 2 78 0 4 1002 942 150 5 53 chr13 54713865 54714055 -65570257 - B2_Mm2 SINE B2 -13 182 2 4 1002 258 149 367 40 chr13 54714171 54714269 -65570043 - B2_Mm2 SINE B2 -19 176 47 4 1002 1114 68 0 0 chr13 54714301 54714448 -65569864 - B1_Mus1 SINE Alu 0 148 2 4 1002 1167 48 0 0 chr13 54714468 54714615 -65569697 - B1_Mus2 SINE Alu 0 147 1 4 1002 1145 112 12 0 chr13 54714615 54714785 -65569527 - B2_Mm1t SINE B2 -17 176 5 4 1002 229 265 0 0 chr13 54714805 54714854 -65569458 - Lx8 LINE L1 -124 7349 7301 4 1002 472 196 49 0 chr13 54714934 54715036 -65569276 - B1_Mur1 SINE Alu -1 148 42 4 1002 22 0 0 0 chr13 54715044 54715066 -65569246 + AT_rich Low_complexity Low_complexity 1 22 0 4 1002 380 259 84 25 chr13 54715245 54715364 -65568948 - Lx8 LINE L1 -889 6584 6459 4 1002 818 202 113 11 chr13 54715510 54715695 -65568617 + B3 SINE B2 2 205 -11 4 1002 495 204 11 0 chr13 54715759 54715847 -65568465 - B3 SINE B2 -86 130 42 4 1002 342 0 0 0 chr13 54715862 54715900 -65568412 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 4 1002 1080 114 0 0 chr13 54715900 54716058 -65568254 - B2_Mm2 SINE B2 -34 161 4 4 1002 261 118 0 0 chr13 54716088 54716139 -65568173 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1002 1161 48 7 0 chr13 54716319 54716465 -65567847 + B1_Mus2 SINE Alu 1 147 0 4 1002 231 61 0 0 chr13 54716468 54716501 -65567811 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1002 314 264 35 0 chr13 54716824 54716911 -65567401 - L1M3 LINE L1 -2296 3844 3755 4 1002 575 173 38 0 chr13 54716911 54717026 -65567286 - B1_Mur3 SINE Alu -1 119 1 4 1002 323 262 34 86 chr13 54716921 54717038 -65567274 - MT2B LTR ERVL -339 262 152 4 1002 1028 48 166 18 chr13 54717113 54717282 -65567030 - B2_Mm2 SINE B2 -1 194 1 4 1002 269 299 13 0 chr13 54717329 54717406 -65566906 + ID4 SINE ID 4 81 -2 4 1002 284 337 50 0 chr13 54717443 54717544 -65566768 + PB1 SINE Alu 20 125 -2 4 1002 198 71 0 0 chr13 54717574 54717602 -65566710 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 4 1002 1075 58 0 0 chr13 54717604 54717741 -65566571 - B1_Mus1 SINE Alu -10 138 2 4 1002 915 293 102 97 chr13 54717818 54718169 -65566143 + L1MB5 LINE L1 5352 5714 -460 4 1002 338 291 0 17 chr13 54718169 54718288 -65566024 + PB1D10 SINE Alu 1 117 0 4 1002 915 293 102 97 chr13 54718288 54718575 -65565737 + L1MB5 LINE L1 5715 5993 -181 4 1002 4030 215 109 49 chr13 54718702 54719089 -65565223 - RMER12 LTR ERVK 0 1322 839 4 1002 366 23 0 0 chr13 54719089 54719132 -65565180 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1002 4030 206 122 30 chr13 54719132 54719635 -65564677 - RMER12 LTR ERVK -484 838 302 4 1002 1099 75 7 0 chr13 54719635 54719781 -65564531 + B1_Mus1 SINE Alu 2 148 0 4 1002 4030 206 122 30 chr13 54719781 54720070 -65564242 - RMER12 LTR ERVK -1021 301 2 4 1002 271 295 103 0 chr13 54720070 54720148 -65564164 - MTD LTR MaLR -62 357 272 4 1002 505 307 7 0 chr13 54720194 54720334 -65563978 - MTD LTR MaLR -261 158 18 4 1002 331 331 15 8 chr13 54720554 54720688 -65563624 + RMER15-int LTR ERVL 2004 2138 -2861 4 1002 1334 54 11 37 chr13 54720689 54720880 -65563432 + B2_Mm2 SINE B2 2 187 -8 4 1002 216 0 0 0 chr13 54720908 54720932 -65563380 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 4 1002 830 161 7 0 chr13 54720934 54721089 -65563223 + CT-rich Low_complexity Low_complexity 1 156 0 4 1002 653 186 8 0 chr13 54721093 54721217 -65563095 - B1_Mus2 SINE Alu -12 135 11 4 1002 279 280 57 41 chr13 54721114 54721237 -65563075 - B4 SINE B4 -88 204 80 4 1002 848 250 10 15 chr13 54721257 54721460 -65562852 - B3 SINE B2 -4 212 11 4 1002 836 122 0 15 chr13 54721527 54721660 -65562652 - B1_Mus1 SINE Alu -16 132 2 4 1002 647 225 17 6 chr13 54721664 54721820 -65562492 - B3 SINE B2 -27 166 5 4 1002 824 150 13 26 chr13 54721828 54721979 -65562333 - B1_Mur3 SINE Alu 0 149 1 4 1002 534 301 56 21 chr13 54721997 54722231 -65562081 - L1M2 LINE L1 -515 5776 5535 4 1002 288 0 0 0 chr13 54722347 54722379 -65561933 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1002 289 276 52 31 chr13 54722393 54722490 -65561822 - PB1D9 SINE Alu -2 118 20 4 1002 180 0 0 0 chr13 54723926 54723946 -65560366 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1002 1296 20 0 0 chr13 54724139 54724286 -65560026 + B1_Mus1 SINE Alu 2 148 0 5 1002 237 108 0 0 chr13 54724289 54724326 -65559986 + (A)n Simple_repeat Simple_repeat 1 37 0 5 1002 495 267 61 0 chr13 54726201 54726332 -65557980 + B1F SINE Alu 1 139 -10 5 1002 226 311 86 48 chr13 54726813 54726999 -65557313 - B2_Mm2 SINE B2 -1 194 2 5 1002 319 297 0 0 chr13 54726927 54727001 -65557311 - RSINE1 SINE B4 -91 74 1 5 1002 1171 75 7 0 chr13 54727258 54727404 -65556908 + B1_Mus1 SINE Alu 2 148 0 5 1002 219 36 0 0 chr13 54727510 54727538 -65556774 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1002 743 117 156 0 chr13 54727605 54727733 -65556579 + B1_Mus1 SINE Alu 1 148 0 5 1002 490 211 42 34 chr13 54727788 54727906 -65556406 - PB1D9 SINE Alu 0 120 2 5 1002 737 209 145 53 chr13 54728000 54728229 -65556083 - Lx8 LINE L1 -311 7162 6904 5 1002 503 285 24 63 chr13 54728229 54728435 -65555877 - B3A SINE B2 0 198 1 5 1002 334 320 69 53 chr13 54728435 54728454 -65555858 - Lx8 LINE L1 -793 6903 6886 5 1002 217 308 125 0 chr13 54728551 54728655 -65555657 - PB1D10 SINE Alu 0 117 1 5 1002 280 182 219 83 chr13 54728673 54728769 -65555543 - B1_Mur1 SINE Alu 0 149 41 5 1002 1644 37 0 0 chr13 54729026 54729217 -65555095 - B2_Mm1a SINE B2 -1 192 2 5 1002 1197 96 20 69 chr13 54729258 54729460 -65554852 - B2_Mm1t SINE B2 0 193 2 5 1002 466 264 206 11 chr13 54729481 54729661 -65554651 - B3 SINE B2 -1 215 1 5 1002 476 350 23 23 chr13 54729713 54729932 -65554380 - B4A SINE B4 0 292 74 5 1002 240 237 50 17 chr13 54730215 54730275 -65554037 - tRNA-Ala-GCY_ tRNA tRNA -7 68 7 5 1002 453 248 175 40 chr13 54730270 54730493 -65553819 + Tigger13a DNA MER2_type 147 399 -372 5 1002 284 269 56 45 chr13 54730774 54730909 -65553403 + MIR SINE MIR 5 132 -130 5 1002 491 300 0 11 chr13 54730924 54731069 -65553243 - MLT1A1 LTR MaLR -4 404 229 5 1002 576 120 200 0 chr13 54731050 54731150 -65553162 + B1_Mus1 SINE Alu 8 127 -21 5 1002 947 123 7 33 chr13 54731166 54731317 -65552995 - B1_Mur3 SINE Alu -2 147 1 5 1002 758 234 88 5 chr13 54731367 54731560 -65552752 - B3 SINE B2 -7 209 1 5 1002 444 177 62 0 chr13 54731565 54731661 -65552651 + MTE-int LTR MaLR 1477 1578 -2 5 1002 403 242 284 48 chr13 54731684 54731915 -65552397 + MTEb LTR MaLR 66 365 -14 5 1002 709 234 90 0 chr13 54732004 54732192 -65552120 + B3 SINE B2 1 205 -11 5 1002 248 245 78 14 chr13 54732552 54732693 -65551619 + ORR1B1-int LTR MaLR 605 754 -755 5 1002 1060 38 30 0 chr13 54732598 54732731 -65551581 + B1_Mus2 SINE Alu 9 145 -2 5 1002 209 125 0 24 chr13 54732734 54732775 -65551537 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 5 1002 1378 67 45 0 chr13 54732923 54733101 -65551211 + B2_Mm2 SINE B2 2 187 -8 5 1002 1592 42 11 0 chr13 54733339 54733529 -65550783 - B2_Mm1a SINE B2 0 193 2 5 1002 355 194 188 30 chr13 54733742 54733843 -65550469 - PB1D9 SINE Alu -2 118 2 5 1002 1124 58 14 0 chr13 54734020 54734159 -65550153 + B1_Mus2 SINE Alu 1 141 -6 5 1002 318 26 0 0 chr13 54734620 54734659 -65549653 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1002 396 71 0 0 chr13 54734940 54734996 -65549316 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1002 1041 90 64 0 chr13 54735319 54735475 -65548837 + B2_Mm2 SINE B2 20 185 -10 5 1002 186 43 0 0 chr13 54735475 54735498 -65548814 + (GGA)n Simple_repeat Simple_repeat 2 24 0 5 1002 575 219 266 54 chr13 54735516 54735757 -65548555 + B4 SINE B4 1 292 0 5 1002 659 178 75 30 chr13 54735849 54735982 -65548330 - B1_Mm SINE Alu 0 147 9 5 1002 327 290 20 20 chr13 54735896 54735998 -65548314 - MT2B LTR ERVL -344 257 156 5 1002 282 264 14 27 chr13 54736019 54736093 -65548219 + ID4_ SINE ID 11 83 0 5 1002 265 308 37 28 chr13 54736147 54736254 -65548058 + MTEb LTR MaLR 219 326 -53 5 1002 219 69 0 0 chr13 54736256 54736285 -65548027 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1002 1127 68 0 39 chr13 54736290 54736444 -65547868 - B1_Mus1 SINE Alu 0 148 1 5 1002 619 231 43 99 chr13 54736732 54736943 -65547369 - URR1B DNA MER1_type 0 225 27 5 1002 264 211 0 0 chr13 54736930 54736982 -65547330 - B1_Mur4 SINE Alu -9 141 90 5 1002 1187 56 0 0 chr13 54737012 54737156 -65547156 - B1_Mus1 SINE Alu -4 144 1 5 1002 570 225 27 0 chr13 54737417 54737528 -65546784 - PB1D9 SINE Alu -6 114 1 5 1002 372 326 0 0 chr13 54737461 54737550 -65546762 - B4 SINE B4 -140 152 64 5 1002 590 238 117 19 chr13 54737549 54737703 -65546609 - B3A SINE B2 -1 197 29 5 1002 360 178 25 0 chr13 54737736 54737819 -65546493 - B2_Mm2 SINE B2 -82 116 26 5 1002 706 58 367 61 chr13 54737947 54738094 -65546218 + B2_Mm2 SINE B2 2 193 -2 5 1002 1330 81 26 21 chr13 54738207 54738397 -65545915 - B2_Mm1t SINE B2 -1 192 2 5 1002 486 257 35 17 chr13 54738448 54738563 -65545749 + B4A SINE B4 6 122 -170 5 1002 322 297 50 121 chr13 54738585 54738631 -65545681 + B4A SINE B4 56 168 -124 5 1002 708 182 24 0 chr13 54738631 54738757 -65545555 + B1_Mur2 SINE Alu 11 139 -10 5 1002 322 297 50 121 chr13 54738757 54738784 -65545528 + B4A SINE B4 169 240 -52 5 1002 1156 88 0 0 chr13 54738825 54738972 -65545340 + B1_Mus1 SINE Alu 2 148 0 5 1002 201 74 0 0 chr13 54738972 54738999 -65545313 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1002 428 313 71 44 chr13 54739381 54739567 -65544745 - ID_B1 SINE B4 -73 219 20 5 1002 423 0 0 0 chr13 54739735 54739782 -65544530 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1002 1149 69 0 7 chr13 54739866 54740012 -65544300 + B1_Mus2 SINE Alu 2 146 -1 5 1002 550 259 27 0 chr13 54740521 54740633 -65543679 + PB1D10 SINE Alu 1 115 -2 5 1002 219 125 0 0 chr13 54740639 54740679 -65543633 + (CGGA)n Simple_repeat Simple_repeat 1 40 0 5 1002 721 200 108 6 chr13 54741197 54741363 -65542949 - MTD LTR MaLR -232 187 5 5 1002 564 211 44 0 chr13 54742012 54742126 -65542186 - ID_B1 SINE B4 -2 222 104 5 1002 779 244 29 0 chr13 54743174 54743346 -65540966 - B3 SINE B2 -39 177 1 5 1002 397 193 24 24 chr13 54743365 54743450 -65540862 - B1F SINE Alu 0 149 65 5 1002 256 264 14 27 chr13 54743424 54743498 -65540814 - B1_Mm SINE Alu -30 117 45 5 1002 1248 79 85 0 chr13 54743593 54743770 -65540542 - B2_Mm1a SINE B2 0 193 2 5 1002 325 281 31 0 chr13 54743927 54744023 -65540289 + CT-rich Low_complexity Low_complexity 4 102 0 5 1002 617 240 32 0 chr13 54744059 54744184 -65540128 - RSINE1 SINE B4 -35 130 2 5 1002 297 256 11 58 chr13 54744189 54744276 -65540036 - PB1D10 SINE Alu -1 126 40 5 1002 289 338 53 10 chr13 54744515 54744615 -65539697 + AluF_3 SINE Alu 139 207 -104 5 1002 1183 188 9 0 chr13 54744618 54744831 -65539481 + B3 SINE B2 2 216 0 5 1002 259 192 0 19 chr13 54744849 54744902 -65539410 + 4.5SRNA scRNA scRNA 37 88 -6 5 1002 312 163 0 0 chr13 54744856 54744905 -65539407 + PB1D10 SINE Alu 45 93 -24 5 1002 1177 49 14 0 chr13 54744962 54745106 -65539206 - B1_Mus2 SINE Alu 0 147 2 5 1002 1195 264 212 26 chr13 54745213 54745406 -65538906 - MER44C DNA MER2_type -171 562 324 5 1002 666 252 7 0 chr13 54745406 54745553 -65538759 - B1_Mur2 SINE Alu 0 149 2 5 1002 1195 264 212 26 chr13 54745553 54745825 -65538487 - MER44C DNA MER2_type -410 323 10 5 1002 371 173 48 24 chr13 54745897 54745980 -65538332 + B1_Mus2 SINE Alu 63 147 0 5 1002 639 173 28 1 chr13 54747712 54747839 -65536473 - B1_Mus1 SINE Alu 0 149 19 5 1002 1108 109 7 0 chr13 54747839 54747986 -65536326 - B1_Mus1 SINE Alu 0 148 1 5 1002 381 158 0 26 chr13 54748376 54748454 -65535858 - B1_Mur3 SINE Alu -6 143 68 5 1002 859 129 0 54 chr13 54748456 54748603 -65535709 + B1_Mur3 SINE Alu 4 142 -7 5 1002 576 320 45 0 chr13 54749222 54749400 -65534912 + MER3 DNA MER1_type 21 206 -3 5 1002 184 343 62 41 chr13 54751704 54751850 -65532462 - MIRb SINE MIR -36 232 84 5 1002 1207 46 126 6 chr13 54752424 54752598 -65531714 + B2_Mm2 SINE B2 1 195 0 5 1002 665 237 137 0 chr13 54753119 54753309 -65531003 + B3 SINE B2 1 216 0 5 1002 1200 28 7 20 chr13 54753690 54753838 -65530474 + B1_Mus1 SINE Alu 2 147 -1 5 1002 629 279 77 31 chr13 54754054 54754276 -65530036 - MER21B LTR ERV1 -4 859 628 5 1002 458 240 151 10 chr13 54754507 54754702 -65529610 + B4A SINE B4 9 232 -60 5 1002 369 254 214 12 chr13 54754702 54754858 -65529454 + B3A SINE B2 1 173 -22 5 1002 282 281 178 11 chr13 54755588 54755607 -65528705 + B1F2 SINE Alu 29 133 -16 5 1002 481 129 0 14 chr13 54755607 54755678 -65528634 + ID_B1 SINE B4 139 208 -16 5 1002 2215 147 58 8 chr13 54755678 54756075 -65528237 - MTC LTR MaLR 0 421 5 5 1002 1170 48 7 0 chr13 54756075 54756221 -65528091 + B1_Mus1 SINE Alu 2 148 0 5 1002 801 186 244 49 chr13 54756232 54756498 -65527814 - MTD LTR MaLR -94 325 8 5 1002 327 265 40 22 chr13 54756556 54756689 -65527623 + B1F1 SINE Alu 1 77 -40 5 1002 241 326 0 0 chr13 54756840 54756926 -65527386 + GA-rich Low_complexity Low_complexity 6 91 0 5 1002 180 111 0 0 chr13 54757034 54757061 -65527251 + (CGTG)n Simple_repeat Simple_repeat 1 27 0 6 1002 186 43 0 0 chr13 54757119 54757142 -65527170 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1002 602 252 0 35 chr13 54757181 54757325 -65526987 + B1_Mur1 SINE Alu 1 139 -10 6 1002 298 259 120 8 chr13 54757832 54757949 -65526363 - RSINE1 SINE B4 -29 136 7 6 1002 1161 75 7 0 chr13 54758123 54758269 -65526043 - B1_Mus1 SINE Alu 0 148 2 6 1002 645 98 0 21 chr13 54758269 54758363 -65525949 - 4.5SRNA scRNA scRNA -2 92 1 6 1002 226 317 54 109 chr13 54758421 54758513 -65525799 - B3 SINE B2 -57 159 73 6 1002 766 106 0 9 chr13 54758516 54758630 -65525682 - B2_Mm2 SINE B2 -82 113 1 6 1002 727 154 46 8 chr13 54758770 54758901 -65525411 - B1_Mur3 SINE Alu -9 140 5 6 1002 582 266 35 23 chr13 54759047 54759220 -65525092 - B4A SINE B4 0 292 118 6 1002 232 216 220 33 chr13 54759234 54759325 -65524987 - B3 SINE B2 -36 180 73 6 1002 189 139 0 0 chr13 54759365 54759408 -65524904 + (T)n Simple_repeat Simple_repeat 1 43 0 6 1002 1146 62 7 0 chr13 54759410 54759555 -65524757 - B1_Mus1 SINE Alu -1 147 2 6 1002 786 238 43 19 chr13 54759581 54759791 -65524521 - B3 SINE B2 0 216 2 6 1002 294 29 0 0 chr13 54759819 54759854 -65524458 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1002 246 316 105 0 chr13 54759868 54759944 -65524368 - B3A SINE B2 -104 94 11 6 1002 429 198 53 62 chr13 54760240 54760353 -65523959 + PB1D9 SINE Alu 9 120 0 6 1002 323 240 67 67 chr13 54760374 54760508 -65523804 + L1MC4 LINE L1 6821 6954 -1088 6 1002 1259 61 66 11 chr13 54760612 54760794 -65523518 + B2_Mm2 SINE B2 4 195 0 6 1002 247 217 204 11 chr13 54761266 54761359 -65522953 + PB1D9 SINE Alu 8 118 -2 6 1002 393 191 86 43 chr13 54761444 54761537 -65522775 - B1_Mus1 SINE Alu -21 127 31 6 1002 1711 21 0 0 chr13 54761712 54761904 -65522408 - B2_Mm1a SINE B2 0 193 2 6 1002 1204 74 0 0 chr13 54761954 54762102 -65522210 - B1_Mus1 SINE Alu 0 148 1 6 1002 29 47 0 0 chr13 54762566 54762609 -65521703 + AT_rich Low_complexity Low_complexity 1 43 0 6 1002 429 96 55 0 chr13 54763469 54763542 -65520770 + PB1D9 SINE Alu 34 110 -10 6 1002 343 299 86 0 chr13 54764461 54764578 -65519734 - ID_B1 SINE B4 -8 216 90 6 1002 326 232 192 40 chr13 54766255 54766354 -65517958 - B1_Mur1 SINE Alu -34 115 2 6 1002 270 0 0 0 chr13 54766364 54766394 -65517918 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1002 988 70 34 27 chr13 54766406 54766552 -65517760 - B1_Mus2 SINE Alu 0 147 1 6 1002 462 262 37 0 chr13 54766915 54767022 -65517290 - RSINE1 SINE B4 -40 125 15 6 1002 714 217 17 147 chr13 54767544 54767776 -65516536 - B3 SINE B2 -3 213 12 6 1002 783 157 36 22 chr13 54767867 54768004 -65516308 - B1_Mur2 SINE Alu -2 147 9 6 1002 204 40 0 0 chr13 54768025 54768050 -65516262 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1002 909 103 81 0 chr13 54768050 54768186 -65516126 - B1_Mus1 SINE Alu 0 148 2 6 1002 430 203 109 109 chr13 54768190 54768383 -65515929 - B2_Mm2 SINE B2 -1 194 2 6 1002 231 88 0 0 chr13 54768596 54768630 -65515682 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1002 2794 161 69 49 chr13 54768634 54769287 -65515025 - RMER19B LTR ERVK -7 895 158 6 1002 1188 82 0 0 chr13 54769287 54769434 -65514878 + B1_Mus1 SINE Alu 2 148 0 6 1002 2794 183 85 76 chr13 54769434 54769596 -65514716 - RMER19B LTR ERVK -745 157 1 6 1002 245 311 40 0 chr13 54769612 54769686 -65514626 - ID4_ SINE ID -4 79 3 6 1002 387 279 36 9 chr13 54769794 54769906 -65514406 + PB1D10 SINE Alu 1 115 -2 6 1002 1079 82 127 0 chr13 54770152 54770310 -65514002 + B2_Mm1t SINE B2 2 179 -14 6 1002 344 102 336 9 chr13 54770315 54770422 -65513890 + B2_Mm2 SINE B2 50 191 -4 6 1002 249 102 40 0 chr13 54770432 54770476 -65513836 + B1_Mur4 SINE Alu 95 145 -2 6 1002 231 268 161 0 chr13 54770502 54770558 -65513754 - B3A SINE B2 -118 80 16 6 1002 896 114 38 43 chr13 54770593 54770761 -65513551 - LTRIS2 LTR ERV1 0 564 342 6 1002 1185 68 0 14 chr13 54770761 54770909 -65513403 + B1_Mm SINE Alu 2 147 0 6 1002 835 266 51 34 chr13 54770909 54771036 -65513276 - LTRIS2 LTR ERV1 -171 341 212 6 1002 848 68 51 0 chr13 54771004 54771121 -65513191 - LTRIS5 LTR ERV1 -324 123 1 6 1002 416 178 42 88 chr13 54771130 54771275 -65513037 - B3A SINE B2 -37 158 2 6 1002 230 258 15 15 chr13 54771436 54771503 -65512809 + ID4_ SINE ID 1 67 -16 6 1002 1246 89 12 0 chr13 54771563 54771731 -65512581 + B2_Mm2 SINE B2 2 171 -24 6 1002 481 183 121 91 chr13 54772056 54772188 -65512124 + B1_Mur3 SINE Alu 2 137 -12 6 1002 981 98 0 0 chr13 54772190 54772333 -65511979 + (TTTC)n Simple_repeat Simple_repeat 2 144 0 6 1002 509 40 14 0 chr13 54772338 54772412 -65511900 - L1Md_F3 LINE L1 -12 6572 6498 6 1002 547 182 242 7 chr13 54772428 54772632 -65511680 - MTD LTR MaLR -47 372 122 6 1002 203 105 0 50 chr13 54772827 54772867 -65511445 + CT-rich Low_complexity Low_complexity 5 42 0 6 1002 1008 58 0 86 chr13 54772901 54773052 -65511260 - B1_Mus1 SINE Alu -9 139 2 6 1002 234 0 0 0 chr13 54773289 54773315 -65510997 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1002 1175 62 7 0 chr13 54773315 54773460 -65510852 - B1_Mus2 SINE Alu 0 147 2 6 1002 1316 92 21 16 chr13 54773491 54773678 -65510634 + B2_Mm2 SINE B2 1 188 -7 6 1002 404 263 58 7 chr13 54773999 54774137 -65510175 + B1F2 SINE Alu 5 149 0 6 1002 494 138 11 11 chr13 54774410 54774498 -65509814 + B1_Mus2 SINE Alu 60 147 0 6 1002 200 59 29 0 chr13 54774644 54774678 -65509634 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1002 1146 59 0 0 chr13 54774678 54774814 -65509498 - B1_Mus2 SINE Alu -11 136 1 6 1002 1273 77 21 42 chr13 54774818 54775008 -65509304 - B2_Mm2 SINE B2 -8 187 2 6 1002 1281 93 32 16 chr13 54775409 54775595 -65508717 + B2_Mm1t SINE B2 1 189 -4 6 1002 938 60 103 22 chr13 54775625 54775761 -65508551 + B1_Mm SINE Alu 1 147 0 6 1002 997 130 55 19 chr13 54775761 54775934 -65508378 - B2_Mm1a SINE B2 -14 179 2 6 1002 288 198 19 4 chr13 54775937 54775995 -65508317 - PB1 SINE Alu 0 127 61 6 1002 1143 75 7 0 chr13 54776087 54776233 -65508079 - B1_Mus1 SINE Alu 0 148 2 6 1002 1293 48 42 6 chr13 54776345 54776513 -65507799 + B2_Mm2 SINE B2 4 177 -18 6 1002 717 55 275 0 chr13 54776514 54776623 -65507689 + B1_Mus1 SINE Alu 1 139 -9 6 1002 324 0 0 0 chr13 54776998 54777034 -65507278 + (TATG)n Simple_repeat Simple_repeat 1 36 0 6 1002 456 193 400 0 chr13 54777034 54777173 -65507139 - B3 SINE B2 -22 194 2 6 1002 226 276 141 41 chr13 54777794 54777964 -65506348 - L1MD LINE L1 -992 5154 4968 6 1002 900 49 187 0 chr13 54778037 54778160 -65506152 + B1_Mus2 SINE Alu 2 147 0 6 1002 664 167 8 31 chr13 54778191 54778321 -65505991 + B1_Mus2 SINE Alu 1 127 -20 6 1002 483 239 59 118 chr13 54778336 54778540 -65505772 - B3 SINE B2 -24 192 1 6 1002 340 207 86 65 chr13 54778596 54778617 -65505695 - RSINE1 SINE B4 -3 162 142 6 1002 426 85 0 0 chr13 54778617 54778676 -65505636 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 1002 340 207 86 65 chr13 54778676 54778747 -65505565 - RSINE1 SINE B4 -24 141 68 6 1002 485 288 70 6 chr13 54778969 54779140 -65505172 - B3A SINE B2 -16 182 1 6 1002 808 195 30 39 chr13 54779142 54779347 -65504965 - B2_Mm2 SINE B2 -3 213 1 6 1002 223 242 119 15 chr13 54779430 54779497 -65504815 + ID_B1 SINE B4 70 143 -81 6 1002 1148 75 0 0 chr13 54779577 54779723 -65504589 - B1_Mus1 SINE Alu -1 147 2 6 1002 210 71 0 0 chr13 54780004 54780032 -65504280 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1002 290 238 224 19 chr13 54780443 54780550 -65503762 + ID_B1 SINE B4 88 216 -8 6 1002 192 200 0 0 chr13 54781113 54781163 -65503149 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 1002 204 40 0 0 chr13 54782878 54782903 -65501409 + (CAGG)n Simple_repeat Simple_repeat 3 27 0 6 1002 202 182 0 0 chr13 54783973 54784006 -65500306 + (CGG)n Simple_repeat Simple_repeat 2 34 0 6 1002 207 0 0 0 chr13 54787098 54787121 -65497191 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1002 278 314 9 5 chr13 54787310 54787418 -65496894 + MIRb SINE MIR 63 175 -93 6 1003 21 0 0 0 chr13 54788715 54788736 -65495576 + GC_rich Low_complexity Low_complexity 1 21 0 6 1003 23 68 0 0 chr13 54789080 54789124 -65495188 + GC_rich Low_complexity Low_complexity 1 44 0 6 1003 187 104 42 0 chr13 54789161 54789209 -65495103 + (CCCCG)n Simple_repeat Simple_repeat 2 51 0 6 1003 271 227 0 57 chr13 54789892 54789962 -65494350 + PB1D10 SINE Alu 50 115 -2 6 1003 605 89 167 10 chr13 54790430 54790532 -65493780 - PB1D9 SINE Alu -1 119 2 6 1003 247 226 173 19 chr13 54790574 54790678 -65493634 - PB1D7 SINE Alu 0 120 1 6 1003 936 139 249 0 chr13 54790731 54790896 -65493416 + B3 SINE B2 2 207 -9 6 1003 1046 72 50 0 chr13 54790914 54791053 -65493259 + B1_Mm SINE Alu 1 146 -1 6 1003 593 185 123 0 chr13 54791074 54791204 -65493108 + B1_Mus2 SINE Alu 1 146 -1 6 1003 810 252 42 28 chr13 54791281 54791493 -65492819 - B3 SINE B2 0 216 2 6 1003 281 219 45 0 chr13 54792300 54792379 -65491933 - MIRm SINE MIR -111 165 76 6 1003 342 270 400 12 chr13 54792409 54792588 -65491724 + B4 SINE B4 44 291 -1 7 1003 257 279 0 0 chr13 54793114 54793182 -65491130 - Charlie8 DNA MER1_type -2265 163 96 7 1003 196 265 107 48 chr13 54793408 54793511 -65490801 - MIR SINE MIR -41 221 113 7 1003 224 288 64 5 chr13 54794167 54794271 -65490041 + MIR SINE MIR 79 187 -21 7 1003 1172 35 14 0 chr13 54796468 54796610 -65487702 + B1_Mus2 SINE Alu 3 146 -1 7 1003 554 244 0 23 chr13 54796637 54796767 -65487545 - B1_Mur2 SINE Alu -13 136 10 7 1003 261 0 0 0 chr13 54796788 54796817 -65487495 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 7 1003 913 79 0 0 chr13 54796823 54796950 -65487362 - B1_Mus1 SINE Alu -21 127 1 7 1003 242 246 18 0 chr13 54798084 54798141 -65486171 - ID_B1 SINE B4 -53 171 114 7 1003 746 201 14 41 chr13 54798156 54798301 -65486011 - B1_Mur1 SINE Alu -7 142 2 7 1003 193 167 41 20 chr13 54798326 54798375 -65485937 + L4 LINE RTE 1779 1828 -201 7 1003 909 185 0 0 chr13 54798450 54798628 -65485684 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 7 1003 252 0 0 0 chr13 54798628 54798656 -65485656 + (TCTA)n Simple_repeat Simple_repeat 1 28 0 7 1003 558 98 0 0 chr13 54798660 54798742 -65485570 + (TTCC)n Simple_repeat Simple_repeat 4 85 0 7 1003 704 165 56 28 chr13 54798748 54798891 -65485421 - B1_Mus2 SINE Alu 0 147 1 7 1003 330 26 0 0 chr13 54799125 54799164 -65485148 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1003 493 215 157 0 chr13 54799252 54799373 -65484939 - RSINE1 SINE B4 -21 144 5 7 1003 842 169 42 0 chr13 54799407 54799549 -65484763 + B1_Mur4 SINE Alu 2 149 -1 7 1003 469 205 16 0 chr13 54800126 54800248 -65484064 + CT-rich Low_complexity Low_complexity 3 126 0 7 1003 313 292 104 0 chr13 54800248 54800354 -65483958 - PB1D10 SINE Alu 0 117 1 7 1003 2096 175 255 80 chr13 54800775 54801257 -65483055 + RMER19A LTR ERVK 1 632 -105 7 1003 1569 47 10 5 chr13 54801257 54801449 -65482863 + B2_Mm2 SINE B2 1 193 -2 7 1003 2096 175 255 80 chr13 54801449 54801483 -65482829 + RMER19A LTR ERVK 633 633 -104 7 1003 1142 49 7 27 chr13 54801483 54801629 -65482683 - B1_Mus2 SINE Alu 0 147 5 7 1003 2096 175 255 80 chr13 54801629 54801738 -65482574 + RMER19A LTR ERVK 633 737 0 7 1003 315 0 0 0 chr13 54802069 54802104 -65482208 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1003 882 109 65 0 chr13 54802112 54802250 -65482062 - B1_Mus1 SINE Alu -1 147 1 7 1003 703 237 58 0 chr13 54802253 54802392 -65481920 - B1_Mur1 SINE Alu 0 149 3 7 1003 210 366 0 0 chr13 54803306 54803377 -65480935 + MIR SINE MIR 87 157 -105 7 1003 209 292 113 17 chr13 54803639 54803754 -65480558 - MIRb SINE MIR -116 152 27 7 1003 240 184 0 0 chr13 54804413 54804462 -65479850 - L1MA6 LINE L1 0 6300 6252 7 1003 461 17 0 17 chr13 54805063 54805122 -65479190 + (TG)n Simple_repeat Simple_repeat 2 59 0 7 1003 216 0 0 0 chr13 54805802 54805826 -65478486 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1003 301 182 30 20 chr13 54805849 54805950 -65478362 + GA-rich Low_complexity Low_complexity 2 103 0 7 1003 310 275 0 0 chr13 54805972 54806052 -65478260 - BC1_Mm scRNA scRNA -71 81 2 7 1003 953 139 21 0 chr13 54806069 54806213 -65478099 + B1_Mus1 SINE Alu 1 147 -1 7 1003 415 273 18 9 chr13 54806213 54806324 -65477988 - PB1D10 SINE Alu -5 112 1 7 1003 255 279 0 0 chr13 54806700 54806779 -65477533 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 7 1003 367 253 22 81 chr13 54806790 54806975 -65477337 + HAL1-2a_MD LINE L1 2346 2519 -505 7 1003 205 152 0 0 chr13 54807351 54807384 -65476928 + (CAGGG)n Simple_repeat Simple_repeat 5 37 0 7 1003 1290 103 5 32 chr13 54807436 54807626 -65476686 - B2_Mm2 SINE B2 -8 187 3 7 1003 414 338 62 17 chr13 54807926 54808118 -65476194 - MLT1G LTR MaLR 0 591 375 7 1003 303 261 0 0 chr13 54808601 54808670 -65475642 - ID4 SINE ID 0 83 15 7 1003 477 0 0 0 chr13 54809354 54809407 -65474905 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1003 669 260 0 0 chr13 54809407 54809553 -65474759 + B1_Mur3 SINE Alu 2 147 -2 7 1003 210 37 0 0 chr13 54809553 54809580 -65474732 + (CCAA)n Simple_repeat Simple_repeat 1 27 0 7 1003 340 204 94 3 chr13 54809596 54809689 -65474623 + B1_Mur2 SINE Alu 22 120 0 7 1003 2023 154 124 79 chr13 54810057 54810460 -65473852 - MTC LTR MaLR 0 421 1 7 1003 329 282 53 47 chr13 54810588 54810759 -65473553 - MER74A LTR ERVL -178 380 209 7 1003 475 181 18 45 chr13 54810921 54811031 -65473281 + B1F2 SINE Alu 18 124 -25 7 1003 432 0 0 0 chr13 54811338 54811386 -65472926 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 7 1003 791 62 257 0 chr13 54811388 54811501 -65472811 - B1_Mus1 SINE Alu -6 142 1 7 1003 1357 95 0 16 chr13 54811502 54811694 -65472618 - B2_Mm2 SINE B2 -5 190 2 7 1003 22 35 0 0 chr13 54811694 54811723 -65472589 + AT_rich Low_complexity Low_complexity 1 29 0 7 1003 253 133 0 0 chr13 54811745 54811790 -65472522 - B2_Mm2 SINE B2 -94 101 57 7 1003 204 149 0 0 chr13 54811790 54811837 -65472475 + (T)n Simple_repeat Simple_repeat 1 47 0 7 1003 1095 96 65 24 chr13 54811893 54812063 -65472249 - B2_Mm1t SINE B2 -14 179 3 7 1003 2081 130 73 60 chr13 54812140 54812509 -65471803 - ORR1C1 LTR MaLR 0 378 5 7 1003 1466 68 10 15 chr13 54813156 54813351 -65470961 - B2_Mm2 SINE B2 0 195 2 7 1003 213 94 0 0 chr13 54814524 54814556 -65469756 + (TGGGGG)n Simple_repeat Simple_repeat 6 37 0 7 1003 483 302 133 5 chr13 54814556 54814759 -65469553 + MER2 DNA MER2_type 104 332 -13 7 1003 827 260 10 10 chr13 54815859 54816053 -65468259 - B3 SINE B2 -1 215 22 7 1003 448 284 14 43 chr13 54816196 54816261 -65468051 + ID_B1 SINE B4 87 150 -74 7 1003 207 0 0 0 chr13 54816261 54816284 -65468028 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1003 1158 50 14 0 chr13 54816286 54816426 -65467886 - B1_Mus1 SINE Alu -6 142 1 7 1003 448 284 14 43 chr13 54816426 54816497 -65467815 + ID_B1 SINE B4 151 222 -2 7 1003 345 82 0 0 chr13 54816790 54816839 -65467473 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1003 269 248 40 27 chr13 54817347 54817496 -65466816 + (TCTCTG)n Simple_repeat Simple_repeat 3 153 0 7 1003 367 219 29 34 chr13 54817578 54817753 -65466559 + (TCTCTG)n Simple_repeat Simple_repeat 5 178 0 7 1003 294 302 12 0 chr13 54818822 54818908 -65465404 - MIRb SINE MIR -131 137 51 7 1003 274 266 76 0 chr13 54821705 54821784 -65462528 - MLT1A1 LTR MaLR -12 396 312 7 1003 247 246 0 44 chr13 54822086 54822154 -65462158 - MER53 DNA hAT -126 67 3 7 1003 223 381 82 0 chr13 54822468 54822655 -65461657 + MIRm SINE MIR 58 267 -1 7 1003 821 172 14 14 chr13 54822716 54822863 -65461449 + B1_Mm SINE Alu 1 147 0 7 1003 207 135 57 19 chr13 54822863 54822916 -65461396 + (CAAA)n Simple_repeat Simple_repeat 1 55 0 7 1003 1540 67 0 5 chr13 54822932 54823127 -65461185 - B2_Mm2 SINE B2 -1 194 1 7 1003 375 60 0 0 chr13 54823367 54823417 -65460895 + (TC)n Simple_repeat Simple_repeat 2 51 0 7 1003 711 189 0 0 chr13 54823490 54823617 -65460695 - B3 SINE B2 -86 130 4 7 1003 1179 61 0 39 chr13 54824255 54824408 -65459904 + B1_Mus2 SINE Alu 1 147 0 7 1003 545 264 9 0 chr13 54824454 54824564 -65459748 + PB1D9 SINE Alu 1 111 -9 7 1003 904 217 38 38 chr13 54824577 54824788 -65459524 + B3 SINE B2 1 211 -5 7 1003 977 225 9 19 chr13 54824828 54825041 -65459271 + ID_B1 SINE B4 2 212 -12 7 1003 234 0 0 0 chr13 54825041 54825067 -65459245 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 7 1003 449 263 10 0 chr13 54826094 54826193 -65458119 + PB1D10 SINE Alu 3 102 -15 7 1003 434 108 0 13 chr13 54826619 54826694 -65457618 + (GGA)n Simple_repeat Simple_repeat 1 74 0 7 1003 216 0 0 0 chr13 54827068 54827092 -65457220 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1003 293 311 42 8 chr13 54828483 54828603 -65455709 - MIRb SINE MIR -41 227 104 7 1003 558 214 25 8 chr13 54828606 54828724 -65455588 - PB1D7 SINE Alu 0 120 1 7 1003 780 59 0 0 chr13 54828802 54828904 -65455408 + (CA)n Simple_repeat Simple_repeat 2 103 0 7 1003 290 280 52 22 chr13 54829442 54829559 -65454753 + MIR SINE MIR 33 151 -117 7 1003 515 263 172 17 chr13 54830072 54830304 -65454008 + ORSL-2b DNA Tip100 192 459 -49 7 1003 674 215 77 0 chr13 54830361 54830491 -65453821 - B1_Mur2 SINE Alu -9 140 1 7 1003 206 219 0 0 chr13 54830768 54830809 -65453503 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1003 550 298 108 36 chr13 54830809 54831004 -65453308 - B4 SINE B4 -3 289 81 7 1003 1424 116 8 0 chr13 54831009 54831251 -65453061 - L1_Mur2 LINE L1 -3493 2384 2141 7 1003 1871 40 0 0 chr13 54831259 54831482 -65452830 - L1Md_A LINE L1 0 6582 6360 7 1003 265 282 13 66 chr13 54831486 54831562 -65452750 - B4 SINE B4 -200 92 21 7 1003 297 0 0 0 chr13 54831571 54831604 -65452708 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1003 742 141 33 72 chr13 54831610 54831763 -65452549 - B1_Mur4 SINE Alu -1 149 3 7 1003 25 0 0 0 chr13 54831778 54831803 -65452509 + AT_rich Low_complexity Low_complexity 1 25 0 7 1003 553 215 74 0 chr13 54832172 54832293 -65452019 + B1F2 SINE Alu 1 130 -19 7 1003 689 197 8 0 chr13 54832885 54833017 -65451295 - B1_Mur1 SINE Alu 0 149 17 7 1003 400 275 0 0 chr13 54833060 54833151 -65451161 + PB1D10 SINE Alu 22 112 -5 7 1003 714 164 0 0 chr13 54833160 54833325 -65450987 + (CA)n Simple_repeat Simple_repeat 1 165 0 8 1003 224 209 0 11 chr13 54833337 54833424 -65450888 + (CA)n Simple_repeat Simple_repeat 2 87 0 8 1003 630 201 0 0 chr13 54833476 54833837 -65450475 + (CA)n Simple_repeat Simple_repeat 1 361 0 8 1003 667 243 0 39 chr13 54836356 54836536 -65447776 - HAL1-2a_MD LINE L1 -516 2508 2336 8 1003 240 86 0 0 chr13 54836536 54836571 -65447741 + (ATGGTG)n Simple_repeat Simple_repeat 1 35 0 8 1003 315 287 124 25 chr13 54836801 54836963 -65447349 + MIRb SINE MIR 37 213 -55 8 1003 37 23 0 0 chr13 54839154 54839198 -65445114 + GC_rich Low_complexity Low_complexity 1 44 0 8 1003 24 32 0 0 chr13 54839519 54839550 -65444762 + GC_rich Low_complexity Low_complexity 1 31 0 8 1003 233 191 109 16 chr13 54842163 54842227 -65442085 + PB1D10 SINE Alu 29 98 -19 8 1003 195 69 0 0 chr13 54842235 54842264 -65442048 + (CAGA)n Simple_repeat Simple_repeat 4 32 0 8 1003 1681 21 21 0 chr13 54842389 54842578 -65441734 - B2_Mm1t SINE B2 0 193 1 8 1003 436 306 145 54 chr13 54842578 54842854 -65441458 - MER102b DNA MER1_type -4 337 37 8 1003 1056 162 116 0 chr13 54843415 54843613 -65440699 + URR1A DNA MER1_type 1 221 -5 8 1003 240 35 0 0 chr13 54843890 54843919 -65440393 + (TTG)n Simple_repeat Simple_repeat 2 30 0 8 1003 550 226 105 0 chr13 54843920 54844044 -65440268 - B1_Mur1 SINE Alu -11 138 2 8 1003 351 271 73 0 chr13 54844130 54844226 -65440086 + PB1D10 SINE Alu 10 112 -5 8 1003 432 216 0 0 chr13 54844235 54844383 -65439929 + (CA)n Simple_repeat Simple_repeat 1 148 0 8 1003 216 182 0 0 chr13 54844401 54844445 -65439867 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1003 1167 62 0 20 chr13 54845182 54845320 -65438992 + B1_Mus1 SINE Alu 2 139 -9 8 1003 431 18 18 0 chr13 54845320 54845376 -65438936 + (CAAAA)n Simple_repeat Simple_repeat 2 58 0 8 1003 564 230 120 26 chr13 54845487 54845679 -65438633 - B3 SINE B2 -3 213 4 8 1003 201 261 0 0 chr13 54846160 54846248 -65438064 + (CA)n Simple_repeat Simple_repeat 1 88 0 8 1003 214 327 27 63 chr13 54846336 54846447 -65437865 + L2b LINE L2 3110 3216 -159 8 1003 261 0 0 0 chr13 54847842 54847871 -65436441 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 8 1003 207 0 0 0 chr13 54847976 54847999 -65436313 + (TG)n Simple_repeat Simple_repeat 1 23 0 8 1003 752 171 7 27 chr13 54848013 54848163 -65436149 - B4 SINE B4 -28 264 118 8 1003 642 113 0 0 chr13 54848163 54848260 -65436052 + (TC)n Simple_repeat Simple_repeat 1 97 0 8 1003 398 318 131 0 chr13 54848326 54848502 -65435810 + Charlie8 DNA MER1_type 85 283 -2145 8 1003 498 61 0 0 chr13 54850494 54850560 -65433752 + (TG)n Simple_repeat Simple_repeat 2 67 0 8 1003 242 73 24 0 chr13 54850799 54850840 -65433472 + (CCCCG)n Simple_repeat Simple_repeat 5 46 0 8 1003 31 76 0 0 chr13 54851082 54851148 -65433164 + GC_rich Low_complexity Low_complexity 1 66 0 8 1003 245 293 0 0 chr13 54851435 54851493 -65432819 + MIR SINE MIR 82 139 -69 8 1003 495 273 6 95 chr13 54852039 54852197 -65432115 + B1F SINE Alu 1 144 -5 8 1003 222 243 238 5 chr13 54853003 54853094 -65431218 + ID_B1 SINE B4 58 171 -53 8 1003 291 214 274 0 chr13 54853029 54853113 -65431199 + PB1D10 SINE Alu 6 112 -5 8 1003 277 359 115 17 chr13 54853266 54853501 -65430811 - LTR16C LTR ERVL -8 481 224 8 1003 482 214 22 5 chr13 54854610 54854839 -65429473 + (TG)n Simple_repeat Simple_repeat 1 233 0 8 1003 255 270 0 92 chr13 54855332 54855430 -65428882 + B1F2 SINE Alu 1 89 -60 8 1003 315 321 0 0 chr13 54855479 54855560 -65428752 + ID4 SINE ID 2 82 -1 8 1003 483 18 0 0 chr13 54857169 54857225 -65427087 + (GA)n Simple_repeat Simple_repeat 2 57 0 8 1003 23 0 0 0 chr13 54857389 54857412 -65426900 + AT_rich Low_complexity Low_complexity 1 23 0 8 1003 330 283 90 10 chr13 54857460 54857560 -65426752 - RSINE1 SINE B4 -38 127 20 8 1003 384 160 0 51 chr13 54857669 54857748 -65426564 - PB1D10 SINE Alu -1 116 42 8 1003 1154 99 0 0 chr13 54858220 54858381 -65425931 + B2_Mm2 SINE B2 2 162 -33 8 1003 198 0 0 0 chr13 54858381 54858403 -65425909 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 8 1003 352 0 42 0 chr13 54858546 54858594 -65425718 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 1003 456 19 0 0 chr13 54858881 54858934 -65425378 + (TC)n Simple_repeat Simple_repeat 2 54 0 8 1003 414 0 0 0 chr13 54858935 54858981 -65425331 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1003 189 0 0 0 chr13 54860403 54860424 -65423888 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 8 1003 211 261 15 0 chr13 54860770 54860835 -65423477 + G-rich Low_complexity Low_complexity 2 67 0 8 1003 228 176 19 19 chr13 54862951 54863003 -65421309 + CT-rich Low_complexity Low_complexity 4 55 0 8 1003 844 220 35 109 chr13 54863037 54863267 -65421045 - B3 SINE B2 -3 213 1 8 1003 232 278 43 22 chr13 54866500 54866592 -65417720 + MIR SINE MIR 50 143 -119 8 1003 305 324 46 0 chr13 54868132 54868240 -65416072 + MIRb SINE MIR 35 147 -121 8 1003 253 401 21 26 chr13 54868728 54868961 -65415351 - L2c LINE L2 -156 3231 3000 8 1003 399 359 27 2 chr13 54868999 54869187 -65415125 + L1MC LINE L1 5520 5705 -2177 8 1003 633 316 93 57 chr13 54869596 54869662 -65414650 + MER2 DNA MER2_type 2 64 -281 8 1003 549 232 157 23 chr13 54869662 54869801 -65414511 + B3A SINE B2 4 167 -31 8 1003 369 0 0 0 chr13 54869801 54869842 -65414470 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1003 549 232 157 23 chr13 54869842 54869874 -65414438 + B3A SINE B2 168 198 0 8 1003 633 316 93 57 chr13 54869874 54870139 -65414173 + MER2 DNA MER2_type 65 345 0 8 1003 3115 14 3 3 chr13 54870258 54870604 -65413708 + ORR1A0 LTR MaLR 1 346 0 8 1003 553 165 10 10 chr13 54871258 54871362 -65412950 - PB1D9 SINE Alu 0 120 17 8 1003 262 279 18 63 chr13 54871401 54871513 -65412799 - MTE2b LTR MaLR -82 297 191 8 1003 241 308 65 28 chr13 54871596 54871703 -65412609 - PB1D7 SINE Alu -6 114 4 8 1003 2413 77 12 39 chr13 54871919 54872257 -65412055 + ORR1A4 LTR MaLR 1 329 0 8 1003 2165 102 3 75 chr13 54872456 54872817 -65411495 + IAPLTR1a_Mm LTR ERVK 1 335 -2 8 1003 4825 54 3 43 chr13 54872817 54873498 -65410814 + IAPEz-int LTR ERVK 9 662 -5819 8 1003 435 82 0 32 chr13 54873498 54873561 -65410751 + IAPEz-int LTR ERVK 1359 1419 -5062 8 1003 1714 123 4 4 chr13 54873550 54873812 -65410500 + IAPEz-int LTR ERVK 2236 2497 -5183 8 1003 896 80 24 0 chr13 54873807 54873932 -65410380 + IAPEz-int LTR ERVK 4783 4910 -2770 8 1003 25199 16 5 0 chr13 54873932 54876875 -65407437 + IAPEz-int LTR ERVK 3525 6481 0 8 1003 2001 94 3 75 chr13 54876875 54877233 -65407079 + IAPLTR1a_Mm LTR ERVK 1 332 -5 8 1003 335 235 204 20 chr13 54877340 54877492 -65406820 + RMER15 LTR ERVL 342 521 -54 8 1003 798 244 35 30 chr13 54877687 54877890 -65406422 + ID_B1 SINE B4 1 204 -20 8 1003 187 164 55 0 chr13 54877902 54877957 -65406355 + GA-rich Low_complexity Low_complexity 4 61 0 8 1003 6139 78 10 21 chr13 54878754 54879571 -65404741 - RLTR13C2 LTR ERVK 0 808 1 8 1003 813 209 7 0 chr13 54880113 54880261 -65404051 + RSINE1 SINE B4 12 160 -5 8 1003 303 28 0 0 chr13 54880337 54880373 -65403939 + (TC)n Simple_repeat Simple_repeat 2 37 0 8 1003 585 0 0 0 chr13 54880374 54880439 -65403873 + (CA)n Simple_repeat Simple_repeat 2 66 0 8 1003 1835 181 31 58 chr13 54880439 54880820 -65403492 + ORR1D1 LTR MaLR 4 374 0 8 1003 215 203 0 59 chr13 54880850 54880918 -65403394 + A-rich Low_complexity Low_complexity 1 64 0 8 1003 422 234 410 14 chr13 54880929 54881068 -65403244 + B3A SINE B2 5 198 0 8 1003 747 207 0 0 chr13 54881203 54881338 -65402974 - B1_Mus1 SINE Alu -10 138 4 8 1003 342 304 86 36 chr13 54881215 54881355 -65402957 - B4 SINE B4 -70 222 76 8 1003 977 208 58 15 chr13 54881374 54881579 -65402733 - B3 SINE B2 -1 215 2 8 1003 474 18 0 0 chr13 54881797 54881852 -65402460 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 1003 552 300 108 40 chr13 54882378 54882771 -65401541 + MLT1G1 LTR MaLR 102 576 -3 8 1003 753 165 8 0 chr13 54882967 54883094 -65401218 - B1_Mur3 SINE Alu -17 132 5 8 1003 477 294 138 87 chr13 54883099 54883397 -65400915 + MTEa LTR MaLR 1 313 -66 8 1003 565 271 19 19 chr13 54883455 54883609 -65400703 - RSINE1 SINE B4 -10 155 2 8 1003 306 65 16 31 chr13 54883745 54883809 -65400503 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 8 1003 2869 45 3 20 chr13 54884268 54884658 -65399654 - MTB_Mm LTR MaLR -24 383 1 8 1003 399 331 0 23 chr13 54884799 54884932 -65399380 - ID_B1 SINE B4 0 224 95 8 1003 966 129 7 26 chr13 54885532 54885683 -65398629 - B1_Mur4 SINE Alu -2 148 1 8 1003 350 98 295 82 chr13 54887325 54887447 -65396865 - B2_Mm2 SINE B2 -1 194 47 8 1003 1147 142 17 0 chr13 54887494 54887670 -65396642 - B2_Mm1a SINE B2 -14 179 1 8 1003 957 89 0 131 chr13 54887761 54887929 -65396383 + B1_Mus2 SINE Alu 2 147 0 8 1003 373 296 37 0 chr13 54888911 54889019 -65395293 - PB1 SINE Alu -12 115 4 8 1003 1239 94 0 0 chr13 54889355 54889535 -65394777 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 8 1003 180 291 136 0 chr13 54891784 54891894 -65392418 + MIRm SINE MIR 11 135 -141 8 1003 550 237 17 0 chr13 54891953 54892071 -65392241 - PB1D7 SINE Alu 0 120 1 8 1003 215 292 111 0 chr13 54892442 54892514 -65391798 - ID_B1 SINE B4 -68 156 77 8 1003 225 224 102 17 chr13 54893350 54893409 -65390903 + B1F SINE Alu 86 149 0 8 1003 1415 70 37 16 chr13 54893412 54893602 -65390710 + B2_Mm2 SINE B2 2 195 0 8 1003 198 0 0 0 chr13 54894042 54894064 -65390248 + (AGGGGG)n Simple_repeat Simple_repeat 2 23 0 8 1003 351 0 0 0 chr13 54895036 54895075 -65389237 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1003 872 185 7 0 chr13 54895076 54895227 -65389085 - B3 SINE B2 -63 153 2 8 1003 234 0 0 0 chr13 54896314 54896340 -65387972 + (CAGC)n Simple_repeat Simple_repeat 4 29 0 8 1003 1116 61 0 75 chr13 54898484 54898644 -65385668 + B1_Mus1 SINE Alu 1 148 0 8 1003 187 312 93 10 chr13 54899816 54899913 -65384399 - L2b LINE L2 -31 3344 3240 9 1003 286 281 48 12 chr13 54900410 54900493 -65383819 - MTEb LTR MaLR -15 364 279 9 1003 234 0 0 0 chr13 54901488 54901514 -65382798 + (TG)n Simple_repeat Simple_repeat 2 27 0 9 1003 283 273 119 20 chr13 54901558 54901659 -65382653 - L2a LINE L2 -1 3425 3315 9 1003 580 363 44 8 chr13 54901736 54901986 -65382326 - MER58B DNA MER1_type -81 260 2 9 1003 244 241 69 46 chr13 54902084 54902171 -65382141 + ID_B1 SINE B4 6 94 -130 9 1003 239 236 40 53 chr13 54902383 54902459 -65381853 - MER2 DNA MER2_type -39 306 232 9 1003 742 220 78 17 chr13 54902475 54902655 -65381657 - B3 SINE B2 0 216 26 9 1003 423 52 0 0 chr13 54902767 54902825 -65381487 + (TC)n Simple_repeat Simple_repeat 1 58 0 9 1003 183 42 0 0 chr13 54902825 54902849 -65381463 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 1003 417 265 219 7 chr13 54902849 54902986 -65381326 - B3 SINE B2 -50 166 1 9 1003 261 0 0 0 chr13 54903123 54903152 -65381160 + (TG)n Simple_repeat Simple_repeat 1 29 0 9 1003 447 295 32 16 chr13 54903163 54903287 -65381025 - B3A SINE B2 -45 153 28 9 1003 600 194 174 0 chr13 54903299 54903443 -65380869 - MTD LTR MaLR -50 369 201 9 1003 263 194 0 29 chr13 54903449 54903518 -65380794 + CT-rich Low_complexity Low_complexity 1 67 0 9 1003 877 163 37 0 chr13 54903530 54903665 -65380647 - B1_Mus1 SINE Alu -6 142 3 9 1003 804 267 15 15 chr13 54903667 54903872 -65380440 - MTD LTR MaLR -212 207 3 9 1003 654 334 38 19 chr13 54903934 54904248 -65380064 - L1MA6 LINE L1 -186 6114 5795 9 1003 943 135 265 0 chr13 54904265 54904435 -65379877 - B3 SINE B2 -1 215 1 9 1003 1223 184 19 0 chr13 54904462 54904674 -65379638 - B3 SINE B2 0 216 1 9 1003 474 218 154 0 chr13 54904772 54904882 -65379430 + RSINE1 SINE B4 1 127 -38 9 1003 6608 86 39 11 chr13 54905691 54906620 -65377692 - RMER17B LTR ERVK 0 958 4 9 1003 2284 61 9 16 chr13 54908426 54908743 -65375569 - MTB LTR MaLR 0 400 86 9 1003 443 86 0 54 chr13 54908729 54908803 -65375509 - B1_Mur3 SINE Alu -79 70 1 9 1003 234 0 0 0 chr13 54909063 54909089 -65375223 + (TG)n Simple_repeat Simple_repeat 1 26 0 9 1003 207 222 11 32 chr13 54910036 54910129 -65374183 + CT-rich Low_complexity Low_complexity 3 93 0 9 1003 382 238 202 0 chr13 54910132 54910216 -65374096 - PB1D10 SINE Alu -16 101 1 9 1003 341 45 29 43 chr13 54910234 54910304 -65374008 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 9 1003 1032 156 0 0 chr13 54910520 54910700 -65373612 + GA-rich Low_complexity Low_complexity 1 180 0 9 1003 799 211 115 5 chr13 54910974 54911165 -65373147 + MER2 DNA MER2_type 1 212 -133 9 1003 438 360 59 49 chr13 54911179 54911465 -65372847 + ORR1E LTR MaLR 1 289 -70 9 1003 240 192 77 0 chr13 54911549 54911601 -65372711 + PB1 SINE Alu 72 127 0 9 1003 1047 143 25 41 chr13 54911787 54911984 -65372328 - B2_Mm2 SINE B2 -1 194 1 9 1003 219 114 0 0 chr13 54912120 54912155 -65372157 + (TCC)n Simple_repeat Simple_repeat 3 37 0 9 1003 1182 112 0 0 chr13 54912155 54912333 -65371979 + (TTC)n Simple_repeat Simple_repeat 3 180 0 9 1003 718 186 8 0 chr13 54912333 54912457 -65371855 - B1_Mur2 SINE Alu -24 125 1 9 1003 762 192 0 0 chr13 54913555 54913685 -65370627 + B3 SINE B2 1 130 -86 9 1003 300 53 0 0 chr13 54913711 54913749 -65370563 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 9 1003 241 246 130 28 chr13 54913779 54913883 -65370429 + B4 SINE B4 43 165 0 9 1003 267 346 59 45 chr13 54914045 54914266 -65370046 - L1ME1 LINE L1 -21 6158 5935 9 1003 278 118 0 38 chr13 54914266 54914279 -65370033 + polypyrimidine Low_complexity Low_complexity 41 53 0 9 1003 1234 73 6 11 chr13 54914279 54914459 -65369853 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 9 1003 278 118 0 38 chr13 54914459 54914498 -65369814 + polypyrimidine Low_complexity Low_complexity 3 40 0 9 1003 1650 31 16 0 chr13 54914505 54914697 -65369615 - B2_Mm2 SINE B2 0 195 1 9 1003 546 295 62 70 chr13 54914735 54914976 -65369336 + MER2 DNA MER2_type 10 248 -97 9 1003 353 323 86 6 chr13 54915123 54915264 -65369048 - MER82 DNA MER2_type 0 653 501 9 1003 468 0 0 0 chr13 54915264 54915316 -65368996 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 1003 353 323 86 6 chr13 54915316 54915336 -65368976 - MER82 DNA MER2_type -153 500 480 9 1003 690 182 94 6 chr13 54915363 54915534 -65368778 + B3 SINE B2 3 188 -28 9 1003 252 0 0 0 chr13 54915541 54915569 -65368743 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 9 1003 858 340 57 48 chr13 54915658 54916094 -65368218 - MER82 DNA MER2_type -212 441 2 9 1003 412 215 102 9 chr13 54916198 54916306 -65368006 - L1ME1 LINE L1 -408 5771 5654 9 1003 253 289 105 24 chr13 54916549 54916673 -65367639 + MLT1A0 LTR MaLR 1 134 -231 9 1003 228 35 0 0 chr13 54916711 54916740 -65367572 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 9 1003 1302 106 28 0 chr13 54916741 54916920 -65367392 - B2_Mm2 SINE B2 -11 184 1 9 1003 774 291 68 8 chr13 54917612 54917861 -65366451 - B4 SINE B4 -27 265 2 9 1003 246 264 42 0 chr13 54918391 54918463 -65365849 + MIRm SINE MIR 89 163 -113 9 1003 324 158 0 0 chr13 54918714 54918771 -65365541 + (TG)n Simple_repeat Simple_repeat 1 57 0 9 1003 793 223 58 51 chr13 54918808 54919082 -65365230 - Tigger5 DNA MER2_type -37 2369 2094 9 1004 276 30 0 0 chr13 54920432 54920465 -65363847 + (TG)n Simple_repeat Simple_repeat 1 33 0 9 1004 1103 138 0 6 chr13 54920575 54920750 -65363562 + B2_Mm2 SINE B2 1 174 -21 9 1004 405 206 0 0 chr13 54920750 54920842 -65363470 + (CA)n Simple_repeat Simple_repeat 1 92 0 9 1004 684 233 0 0 chr13 54921275 54921577 -65362735 + (TG)n Simple_repeat Simple_repeat 1 302 0 9 1004 206 0 130 0 chr13 54922146 54922200 -65362112 + (TAGG)n Simple_repeat Simple_repeat 3 63 0 9 1004 2212 141 85 8 chr13 54922579 54922945 -65361367 + ORR1B1 LTR MaLR 1 394 0 9 1004 217 274 0 16 chr13 54923702 54923765 -65360547 + G-rich Low_complexity Low_complexity 2 63 0 9 1004 235 274 16 0 chr13 54924557 54924619 -65359693 - tRNA-Ala-GCY_ tRNA tRNA -11 64 2 9 1004 397 273 90 8 chr13 54924638 54924760 -65359552 - B1F SINE Alu -8 141 10 9 1004 207 0 0 0 chr13 54924781 54924804 -65359508 + (CCTG)n Simple_repeat Simple_repeat 1 23 0 9 1004 21 57 0 0 chr13 54924893 54924928 -65359384 + AT_rich Low_complexity Low_complexity 1 35 0 9 1004 1152 173 23 28 chr13 54924928 54925142 -65359170 - B3 SINE B2 -3 213 1 9 1004 210 276 50 50 chr13 54925161 54925241 -65359071 - B4 SINE B4 -206 86 7 9 1004 402 321 7 7 chr13 54925433 54925568 -65358744 + B1F SINE Alu 1 135 -14 9 1004 3637 10 2 0 chr13 54926779 54927174 -65357138 - MTA_Mm LTR MaLR 0 396 1 9 1004 9079 39 11 1 chr13 54927174 54928261 -65356051 - MTA_Mm-int LTR MaLR 0 1098 1 9 1004 3637 10 2 0 chr13 54928261 54928656 -65355656 - MTA_Mm LTR MaLR 0 396 1 9 1004 1406 49 27 16 chr13 54929221 54929406 -65354906 + B2_Mm2 SINE B2 3 189 -6 9 1004 936 33 8 0 chr13 54930345 54930467 -65353845 + B1_Mus2 SINE Alu 25 147 0 9 1004 319 100 0 28 chr13 54930564 54930636 -65353676 + (CAAAAA)n Simple_repeat Simple_repeat 3 72 0 9 1004 2246 92 51 0 chr13 54931678 54931993 -65352319 + L1_Mus3 LINE L1 6308 6638 0 9 1004 245 231 124 62 chr13 54932006 54932045 -65352267 - B3 SINE B2 -3 213 170 9 1004 306 0 0 0 chr13 54932045 54932079 -65352233 + (TG)n Simple_repeat Simple_repeat 2 35 0 9 1004 245 231 124 62 chr13 54932079 54932136 -65352176 - B3 SINE B2 -47 169 111 9 1004 1170 78 0 0 chr13 54932178 54932358 -65351954 + (CA)n Simple_repeat Simple_repeat 1 180 0 9 1004 765 196 20 20 chr13 54932376 54932522 -65351790 - B1_Mur3 SINE Alu -3 146 1 9 1004 450 296 116 0 chr13 54932669 54932868 -65351444 + L1MEf LINE L1 1632 1853 -4389 9 1004 415 274 9 45 chr13 54932962 54933073 -65351239 + RSINE1 SINE B4 41 147 -18 9 1004 531 31 0 0 chr13 54933073 54933138 -65351174 + (CA)n Simple_repeat Simple_repeat 1 65 0 9 1004 279 340 10 20 chr13 54933151 54933162 -65351150 + MT2B2 LTR ERVL 153 162 -422 9 1004 322 264 76 11 chr13 54933162 54933254 -65351058 + B1F SINE Alu 1 98 -51 9 1004 524 281 94 90 chr13 54933329 54933552 -65350760 + ID_B1 SINE B4 1 224 0 9 1004 309 294 56 0 chr13 54933755 54933881 -65350431 + L1MEf LINE L1 5200 5332 -814 9 1004 690 294 0 11 chr13 54933886 54934065 -65350247 + B3A SINE B2 1 177 -21 9 1004 2305 50 3 33 chr13 54934069 54934398 -65349914 - ORR1A2 LTR MaLR -8 319 1 9 1004 1385 30 89 0 chr13 54934444 54934612 -65349700 + B2_Mm1a SINE B2 2 184 -9 9 1004 713 201 2 10 chr13 54934642 54934793 -65349519 + B1_Mm SINE Alu 1 144 -5 9 1004 186 118 0 0 chr13 54934794 54934828 -65349484 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 9 1004 814 254 149 4 chr13 54934828 54935104 -65349208 + L1M5 LINE L1 5319 5634 -545 9 1004 567 201 226 65 chr13 54935490 54935676 -65348636 - B3 SINE B2 0 216 1 9 1004 353 306 155 59 chr13 54935998 54936269 -65348043 - MLT1D LTR MaLR -28 477 181 9 1004 904 115 13 6 chr13 54937069 54937227 -65347085 + (TTTC)n Simple_repeat Simple_repeat 3 161 0 9 1004 1332 96 17 0 chr13 54937227 54937405 -65346907 - B2_Mm2 SINE B2 -14 181 1 9 1004 291 264 32 65 chr13 54937407 54937500 -65346812 - MLT1D LTR MaLR -537 90 1 9 1004 190 328 17 0 chr13 54937576 54937634 -65346678 + L2a LINE L2 3271 3329 -97 9 1004 405 0 0 0 chr13 54938011 54938056 -65346256 + (TG)n Simple_repeat Simple_repeat 1 45 0 9 1004 262 311 44 11 chr13 54938069 54938160 -65346152 + MIR SINE MIR 27 120 -88 9 1004 206 273 15 0 chr13 54939630 54939696 -65344616 + (TGGG)n Simple_repeat Simple_repeat 1 67 0 9 1004 265 231 0 0 chr13 54940279 54940331 -65343981 - L2c LINE L2 -1 3386 3335 9 1004 284 329 82 35 chr13 54940641 54940811 -65343501 - MLT1K LTR MaLR -293 302 125 9 1004 1604 62 0 5 chr13 54941424 54941619 -65342693 - B2_Mm2 SINE B2 0 195 2 1 1004 854 259 168 53 chr13 54941636 54942010 -65342302 + MT2B LTR ERVL 82 539 -62 1 1004 1403 87 38 0 chr13 54942492 54942676 -65341636 - B2_Mm2 SINE B2 0 195 5 1 1004 511 28 0 27 chr13 54942698 54942772 -65341540 - L1Md_F3 LINE L1 -14 6570 6499 1 1004 234 0 0 0 chr13 54942793 54942819 -65341493 + (TTA)n Simple_repeat Simple_repeat 1 26 0 1 1004 915 50 0 0 chr13 54942820 54942940 -65341372 - B1_Mus1 SINE Alu -2 146 27 1 1004 1001 177 50 0 chr13 54942950 54943131 -65341181 + MT2A LTR ERVL 117 306 -227 1 1004 338 248 183 73 chr13 54943145 54943499 -65340813 - RMER10A LTR ERVL -19 423 10 1 1004 2291 120 11 11 chr13 54943502 54943872 -65340440 + ORR1C1 LTR MaLR 9 378 0 1 1004 718 257 17 100 chr13 54943872 54944128 -65340184 + MT2A LTR ERVL 300 531 -2 1 1004 1084 208 18 41 chr13 54944603 54944824 -65339488 + B3 SINE B2 1 216 0 1 1004 582 63 0 0 chr13 54944885 54944964 -65339348 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 1004 219 36 0 0 chr13 54945543 54945571 -65338741 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 1004 869 208 54 39 chr13 54945694 54945899 -65338413 - B3 SINE B2 -5 211 4 1 1004 441 0 0 0 chr13 54946369 54946418 -65337894 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1004 1445 75 21 5 chr13 54946487 54946676 -65337636 + B2_Mm2 SINE B2 4 195 0 1 1004 495 0 0 0 chr13 54946750 54946805 -65337507 + (GGAA)n Simple_repeat Simple_repeat 3 57 0 1 1004 365 270 17 59 chr13 54946855 54946973 -65337339 - PB1 SINE Alu 0 127 15 1 1004 1311 182 176 13 chr13 54948115 54948421 -65335891 + ORR1C1 LTR MaLR 1 356 -22 1 1004 1663 178 38 75 chr13 54948652 54949078 -65335234 - RMER17C LTR ERVK 0 410 1 1 1004 538 266 55 20 chr13 54949760 54949906 -65334406 - ID_B1 SINE B4 -3 221 71 1 1004 514 309 29 7 chr13 54949958 54950098 -65334214 + RSINE1 SINE B4 2 144 -21 1 1004 225 65 0 0 chr13 54950103 54950134 -65334178 + (CACG)n Simple_repeat Simple_repeat 1 31 0 1 1004 22 0 0 0 chr13 54950137 54950159 -65334153 + AT_rich Low_complexity Low_complexity 1 22 0 1 1004 863 229 23 32 chr13 54950184 54950401 -65333911 + B3 SINE B2 2 216 0 1 1004 1309 99 28 0 chr13 54950408 54950590 -65333722 + B2_Mm2 SINE B2 1 187 -8 1 1004 198 0 0 0 chr13 54950639 54950661 -65333651 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1004 825 196 14 0 chr13 54950678 54950821 -65333491 - B1_Mus2 SINE Alu 0 147 3 1 1004 334 186 23 0 chr13 54951671 54951757 -65332555 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 1004 222 91 0 0 chr13 54951878 54951911 -65332401 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 1 1004 453 232 161 0 chr13 54952932 54953044 -65331268 + RSINE1 SINE B4 3 132 -33 1 1004 571 181 25 6 chr13 54953813 54953974 -65330338 + CT-rich Low_complexity Low_complexity 3 166 0 1 1004 379 200 13 0 chr13 54953974 54954049 -65330263 - B1_Mur4 SINE Alu -55 95 20 1 1004 245 237 66 85 chr13 54953983 54954089 -65330223 - MT2B LTR ERVL -361 240 137 1 1004 1110 222 5 9 chr13 54954165 54954379 -65329933 + B3 SINE B2 4 216 0 1 1004 1418 77 0 44 chr13 54954403 54954606 -65329706 + B2_Mm2 SINE B2 2 195 0 1 1004 329 311 23 47 chr13 54955092 54955220 -65329092 + PB1 SINE Alu 1 125 -2 1 1004 232 256 10 62 chr13 54955368 54955464 -65328848 + MLT1A1 LTR MaLR 318 408 0 1 1004 316 141 11 21 chr13 54955619 54955713 -65328599 + (CAGAGA)n Simple_repeat Simple_repeat 4 96 0 1 1004 1490 48 37 0 chr13 54958416 54958604 -65325708 - B2_Mm2 SINE B2 0 195 1 1 1004 352 280 93 57 chr13 54959143 54959336 -65324976 - MLT1K LTR MaLR 0 595 396 1 1004 198 297 98 9 chr13 54959712 54959824 -65324488 - MIR SINE MIR -128 134 13 1 1004 262 308 13 0 chr13 54960083 54960161 -65324151 + ID4 SINE ID 3 81 -2 1 1004 423 297 66 33 chr13 54960190 54960312 -65324000 + B1F1 SINE Alu 3 128 -21 1 1004 778 164 10 0 chr13 54960546 54960846 -65323466 + (CA)n Simple_repeat Simple_repeat 1 303 0 1 1004 21 36 0 0 chr13 54961023 54961051 -65323261 + AT_rich Low_complexity Low_complexity 1 28 0 1 1004 3187 72 10 15 chr13 54961094 54961503 -65322809 + MTB_Mm LTR MaLR 1 407 0 1 1004 1157 317 89 4 chr13 54961854 54962317 -65321995 + RMER5 LTR ERV1 33 534 0 1 1004 202 341 101 7 chr13 54963125 54963264 -65321048 + L2a LINE L2 3275 3426 0 1 1004 191 283 20 98 chr13 54964867 54964969 -65319343 - L2 LINE L2 -567 2852 2759 1 1004 315 0 0 0 chr13 54965176 54965211 -65319101 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 1 1004 510 212 30 0 chr13 54965215 54965314 -65318998 - B1_Mm SINE Alu -44 103 2 1 1004 594 287 68 72 chr13 54965387 54965714 -65318598 - MLT1J LTR MaLR -133 379 13 1 1004 1151 50 7 0 chr13 54966363 54966502 -65317810 + B1_Mus1 SINE Alu 1 140 -8 1 1004 297 51 0 0 chr13 54966502 54966541 -65317771 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1004 232 283 110 55 chr13 54967008 54967154 -65317158 - HAL1 LINE L1 -813 1694 1541 1 1004 1064 116 39 34 chr13 54967302 54967480 -65316832 - B2_Mm2 SINE B2 -16 179 1 1 1004 252 86 0 0 chr13 54967503 54967538 -65316774 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 1 1004 721 179 28 0 chr13 54967939 54968084 -65316228 + B2_Mm2 SINE B2 43 191 -4 1 1004 313 197 66 0 chr13 54968303 54968364 -65315948 - HAL1 LINE L1 -1811 696 632 1 1004 372 43 0 0 chr13 54968586 54968632 -65315680 + (TCTG)n Simple_repeat Simple_repeat 2 47 0 1 1004 499 240 0 0 chr13 54968635 54968731 -65315581 - B1_Mur1 SINE Alu -16 133 38 1 1004 490 259 26 8 chr13 54968769 54968886 -65315426 - RSINE1 SINE B4 -15 150 32 1 1004 1402 81 16 0 chr13 54968940 54969126 -65315186 - B2_Mm2 SINE B2 -6 189 1 1 1004 304 288 126 38 chr13 54969289 54969448 -65314864 - MLT1A0 LTR MaLR -168 197 25 1 1004 764 196 2 14 chr13 54969966 54970395 -65313917 + CT-rich Low_complexity Low_complexity 1 423 0 1 1004 243 330 45 18 chr13 54970460 54970571 -65313741 + L2c LINE L2 3209 3340 -47 1 1004 517 306 5 43 chr13 54970589 54970815 -65313497 - L1ME4a LINE L1 -220 5904 5684 1 1004 770 295 35 58 chr13 54971106 54971451 -65312861 - MLT1A0 LTR MaLR 0 365 29 1 1004 309 350 97 57 chr13 54971625 54971873 -65312439 + MLT1K LTR MaLR 164 421 -174 1 1004 232 327 68 45 chr13 54971907 54972041 -65312271 - L2a LINE L2 -37 3389 3202 1 1004 397 323 68 130 chr13 54972273 54972611 -65311701 - ORR1E LTR MaLR -5 354 38 1 1004 1228 242 65 20 chr13 54974304 54974645 -65309667 + RCHARR1 DNA MER1_type 569 924 -50 1 1004 337 267 136 32 chr13 54974955 54975110 -65309202 - RMER15 LTR ERVL -50 525 355 1 1004 240 231 31 0 chr13 54975580 54975645 -65308667 + MER113A DNA MER1_type 231 297 -17 1 1004 234 257 15 17 chr13 54979486 54979561 -65304751 + MIRc SINE MIR 82 155 -121 1 1004 459 262 23 16 chr13 54979787 54979915 -65304397 + RSINE1 SINE B4 2 130 -35 1 1004 367 229 80 40 chr13 54979990 54980090 -65304222 + B1_Mur1 SINE Alu 46 149 0 1 1004 243 88 0 0 chr13 54980181 54980215 -65304097 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1004 815 193 14 14 chr13 54980222 54980369 -65303943 - B1_Mur1 SINE Alu 0 149 3 1 1004 479 17 0 16 chr13 54981504 54981565 -65302747 + (TTTTA)n Simple_repeat Simple_repeat 4 63 0 1 1004 678 315 143 28 chr13 54981589 54982023 -65302289 + MLT1K LTR MaLR 99 582 -13 1 1004 253 307 70 0 chr13 54982361 54982475 -65301837 + L1MD3 LINE L1 7874 7995 0 1 1004 238 344 126 16 chr13 54982511 54982638 -65301674 + MIR SINE MIR 50 190 -78 1 1004 239 291 28 14 chr13 54982698 54982854 -65301458 + MIR SINE MIR 33 202 -66 1 1004 748 273 5 15 chr13 54983964 54984161 -65300151 + B3A SINE B2 2 196 -2 1 1004 25 31 0 0 chr13 54984167 54984199 -65300113 + AT_rich Low_complexity Low_complexity 1 32 0 1 1004 239 133 0 0 chr13 54984339 54984384 -65299928 - ORR1A2 LTR MaLR -236 91 47 1 1004 213 382 0 0 chr13 54985652 54985741 -65298571 + MIR SINE MIR 33 121 -87 1 1004 189 318 102 53 chr13 54988142 54988348 -65295964 - L2a LINE L2 -261 3165 2950 1 1004 222 37 0 0 chr13 54990124 54990151 -65294161 + (CAA)n Simple_repeat Simple_repeat 2 28 0 1 1004 240 282 122 58 chr13 54990433 54990572 -65293740 + MIRb SINE MIR 49 196 -72 1 1004 286 194 0 46 chr13 54990642 54990707 -65293605 + ID4 SINE ID 2 63 -20 1 1004 348 24 0 0 chr13 54990717 54990758 -65293554 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1004 244 254 169 0 chr13 54991018 54991089 -65293223 - B4 SINE B4 -208 84 2 1 1004 1173 153 39 29 chr13 54991455 54991663 -65292649 + B3 SINE B2 5 214 -2 1 1004 282 29 0 0 chr13 54991725 54991760 -65292552 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1004 981 222 18 41 chr13 54992263 54992484 -65291828 + B3 SINE B2 1 216 0 1 1004 835 294 87 68 chr13 54992828 54993031 -65291281 + MTEa LTR MaLR 1 220 -159 1 1004 820 119 245 0 chr13 54993031 54993174 -65291138 - B2_Mm1t SINE B2 -14 179 2 1 1004 835 294 87 68 chr13 54993174 54993338 -65290974 + MTEa LTR MaLR 221 374 -5 1 1004 257 209 15 0 chr13 54993943 54994010 -65290302 + CT-rich Low_complexity Low_complexity 2 69 0 1 1004 280 111 37 0 chr13 54994307 54994361 -65289951 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1004 618 151 46 6 chr13 54994389 54994562 -65289750 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1004 249 145 32 16 chr13 54994580 54994643 -65289669 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1004 648 143 54 0 chr13 54994656 54994824 -65289488 + (TG)n Simple_repeat Simple_repeat 1 177 0 1 1004 862 244 57 0 chr13 54996422 54996615 -65287697 + B3 SINE B2 10 213 -3 1 1004 297 363 137 0 chr13 54997094 54997306 -65287006 + L5 LINE RTE 2008 2248 -17 1 1004 235 326 20 39 chr13 54997682 54997784 -65286528 + MER113A DNA MER1_type 118 217 -97 1 1004 491 197 11 12 chr13 54998095 54998197 -65286115 + B3 SINE B2 36 138 -78 1 1004 501 157 155 9 chr13 54998199 54998315 -65285997 + B1_Mur1 SINE Alu 17 149 0 1 1004 360 271 131 33 chr13 54998556 54998770 -65285542 + L1MEg LINE L1 789 1023 -5219 1 1004 364 310 140 16 chr13 54998751 54998994 -65285318 + L1MEg LINE L1 4420 4692 -1454 1 1004 272 302 176 40 chr13 54999022 54999295 -65285017 - Lx8 LINE L1 0 7473 7164 1 1004 2748 160 122 43 chr13 54999418 55000000 -65284312 - RMER1B Other Other -6 1060 433 1 1004 1761 209 66 44 chr13 55000000 55000412 -65283900 - RMER1B Other Other -585 481 76 1 1004 427 260 0 112 chr13 55000658 55000801 -65283511 + RSINE1 SINE B4 3 129 -36 2 1004 1125 189 55 0 chr13 55000841 55001042 -65283270 - B3 SINE B2 0 216 5 3 1004 369 0 0 0 chr13 55001043 55001084 -65283228 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1004 996 135 0 0 chr13 55001084 55001225 -65283087 - B1_Mur4 SINE Alu -9 141 1 5 1004 995 182 144 30 chr13 55001354 55001636 -65282676 - ORR1D1 LTR MaLR -62 332 11 6 1004 375 352 75 56 chr13 55001636 55001955 -65282357 - ORR1E LTR MaLR -14 345 21 7 1004 1428 316 111 58 chr13 55002170 55002739 -65281573 + L1ME3A LINE L1 3319 3923 -2223 8 1004 1454 70 0 11 chr13 55002739 55002926 -65281386 + B2_Mm2 SINE B2 2 186 -9 9 1004 1428 316 111 58 chr13 55002926 55003357 -65280955 + L1ME3A LINE L1 3924 4390 -1756 8 1004 1297 20 0 0 chr13 55003357 55003504 -65280808 + B1_Mus2 SINE Alu 1 147 0 1 1004 1428 316 111 58 chr13 55003504 55003820 -65280492 + L1ME3A LINE L1 4391 4704 -1442 8 1004 284 329 17 72 chr13 55003862 55004042 -65280270 + B3A SINE B2 26 195 -3 1 1004 683 81 10 0 chr13 55004046 55004145 -65280167 + (GA)n Simple_repeat Simple_repeat 2 101 0 1 1004 298 311 180 0 chr13 55004157 55004279 -65280033 + B1F SINE Alu 1 144 -5 1 1004 253 340 40 33 chr13 55004285 55004437 -65279875 + L1ME3A LINE L1 4807 4959 -1187 8 1004 902 158 0 0 chr13 55004472 55004624 -65279688 - ORR1D1 LTR MaLR -218 156 5 1 1004 336 240 77 77 chr13 55004627 55004731 -65279581 + MTEa LTR MaLR 32 135 -244 1 1004 372 241 113 60 chr13 55004742 55004910 -65279402 + MTEa LTR MaLR 203 379 0 1 1004 257 243 14 0 chr13 55004987 55005061 -65279251 + L1ME3A LINE L1 5110 5184 -962 8 1004 277 225 56 0 chr13 55005061 55005132 -65279180 - Lx9 LINE L1 -349 7295 7221 1 1004 330 243 27 9 chr13 55005210 55005322 -65278990 + Lx9 LINE L1 7518 7631 -13 1 1004 751 128 0 33 chr13 55005323 55005444 -65278868 + B2_Mm2 SINE B2 2 118 -77 1 1004 195 129 0 0 chr13 55005450 55005481 -65278831 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1 1004 366 286 89 84 chr13 55005482 55005635 -65278677 + L1ME3A LINE L1 5149 5301 -845 8 1004 1204 61 7 0 chr13 55005635 55005782 -65278530 + B1_Mus1 SINE Alu 1 148 0 2 1004 366 314 90 61 chr13 55005782 55005858 -65278454 + L1ME3A LINE L1 5302 5394 -752 8 1004 459 0 0 0 chr13 55005880 55005931 -65278381 + (TTTA)n Simple_repeat Simple_repeat 4 54 0 2 1004 627 116 259 0 chr13 55005931 55006043 -65278269 - B1_Mus2 SINE Alu -4 143 3 2 1004 601 292 65 16 chr13 55006347 55006594 -65277718 + L1ME3A LINE L1 5853 6111 -62 8 1004 362 197 24 73 chr13 55006639 55006721 -65277591 + RSINE1 SINE B4 3 80 -85 2 1004 309 262 18 64 chr13 55006862 55006953 -65277359 - L1MC2 LINE L1 0 6344 6256 2 1004 950 140 0 6 chr13 55006953 55007133 -65277179 + (TCC)n Simple_repeat Simple_repeat 1 179 0 2 1004 309 262 18 64 chr13 55007133 55007151 -65277161 - L1MC2 LINE L1 -89 6255 6240 2 1004 835 234 23 28 chr13 55007300 55007515 -65276797 - B3 SINE B2 -2 214 1 2 1004 232 234 90 60 chr13 55007543 55007643 -65276669 - L1MC1 LINE L1 0 6333 6231 2 1004 597 107 7 44 chr13 55007643 55007780 -65276532 + (CA)n Simple_repeat Simple_repeat 1 132 0 2 1004 227 235 132 0 chr13 55007810 55007878 -65276434 - MTEa LTR MaLR -2 377 301 2 1004 554 280 126 5 chr13 55007997 55008212 -65276100 - L1MB3 LINE L1 -158 6025 5785 3 1004 234 331 40 20 chr13 55008263 55008411 -65275901 - RMER15 LTR ERVL -3 572 422 3 1004 1506 252 106 15 chr13 55008958 55009485 -65274827 - L1MC1 LINE L1 -13 6320 5746 3 1004 297 298 120 0 chr13 55009520 55009678 -65274634 - L1MCa LINE L1 -4190 2318 2142 3 1004 810 248 54 14 chr13 55009790 55010068 -65274244 - L1MCa LINE L1 -4589 1919 1631 3 1004 462 286 0 0 chr13 55010090 55010400 -65273912 + (TG)n Simple_repeat Simple_repeat 1 310 0 3 1004 235 247 0 115 chr13 55010402 55010489 -65273823 - RSINE1 SINE B4 0 165 89 3 1004 262 289 61 10 chr13 55010572 55010670 -65273642 - L1MCa LINE L1 -4893 1615 1513 3 1004 295 304 19 19 chr13 55010672 55010776 -65273536 - PB1 SINE Alu -2 125 22 3 1004 699 218 63 23 chr13 55010808 55011029 -65273283 - L1MCa LINE L1 -5467 1041 812 3 1004 251 128 69 11 chr13 55011035 55011122 -65273190 + (TA)n Simple_repeat Simple_repeat 2 93 0 3 1004 421 287 191 27 chr13 55011688 55011982 -65272330 - L1MCa LINE L1 -5880 628 287 3 1004 591 281 70 25 chr13 55012347 55012548 -65271764 + L1MC LINE L1 5598 5807 -2075 3 1004 439 231 18 44 chr13 55012800 55012913 -65271399 - PB1D10 SINE Alu -4 113 4 3 1004 232 299 102 8 chr13 55013811 55013939 -65270373 - L2b LINE L2 -7 3368 3229 4 1004 281 145 16 0 chr13 55014667 55014729 -65269583 + G-rich Low_complexity Low_complexity 2 64 0 4 1004 238 310 46 0 chr13 55014819 55014906 -65269406 + MER102b DNA MER1_type 17 107 -234 4 1004 1250 248 53 36 chr13 55015088 55015448 -65268864 + MTEb LTR MaLR 8 373 -6 4 1004 244 330 105 18 chr13 55015472 55015586 -65268726 + B4A SINE B4 39 162 -130 4 1004 394 226 12 0 chr13 55015656 55015740 -65268572 - ID_B1 SINE B4 -58 166 82 4 1004 216 97 0 0 chr13 55015940 55015971 -65268341 + (TC)n Simple_repeat Simple_repeat 2 32 0 4 1004 3050 149 110 19 chr13 55016640 55017175 -65267137 - RMER4B LTR ERVK -1 584 1 4 1004 284 339 59 88 chr13 55017370 55017478 -65266834 + ORR1E LTR MaLR 53 153 -206 4 1004 2754 52 3 0 chr13 55017478 55017804 -65266508 - ORR1A2 LTR MaLR 0 327 1 4 1004 284 253 93 119 chr13 55017804 55018007 -65266305 + ORR1E LTR MaLR 154 378 -1 4 1004 480 268 122 11 chr13 55018136 55018317 -65265995 - MLT2B4 LTR ERVL -353 203 3 5 1004 278 358 0 0 chr13 55018363 55018458 -65265854 + MLT1D LTR MaLR 403 497 -8 5 1004 261 0 0 0 chr13 55019576 55019605 -65264707 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1004 230 309 22 23 chr13 55019818 55019941 -65264371 + L2b LINE L2 3070 3195 -192 5 1004 789 298 65 50 chr13 55020929 55021309 -65263003 + MLT1B LTR MaLR 1 467 0 5 1004 250 349 12 0 chr13 55021558 55021644 -65262668 + MER58A DNA MER1_type 21 107 -117 5 1004 1814 246 37 25 chr13 55022167 55022677 -65261635 + RMER20A LTR ERVK 1 516 0 5 1004 1176 260 82 40 chr13 55022790 55023195 -65261117 + MERVK26-int LTR ERVK 87 508 -6411 5 1004 183 114 0 0 chr13 55023424 55023459 -65260853 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1004 1213 68 0 0 chr13 55023479 55023626 -65260686 - B1_Mm SINE Alu 0 147 1 5 1004 1663 223 42 48 chr13 55024104 55024561 -65259751 - RMER20A LTR ERVK -62 454 1 6 1004 1481 69 0 11 chr13 55024877 55025067 -65259245 + B2_Mm2 SINE B2 1 188 -7 6 1004 335 236 43 60 chr13 55025464 55025581 -65258731 - Tigger7 DNA MER2_type -4 2487 2373 6 1004 2118 166 58 43 chr13 55025658 55025760 -65258552 + MTC LTR MaLR 1 109 -312 6 1004 3442 57 0 0 chr13 55025760 55026167 -65258145 - MTB_Mm LTR MaLR 0 407 1 6 1004 2118 166 58 43 chr13 55026167 55026479 -65257833 + MTC LTR MaLR 110 421 0 6 1004 365 366 21 7 chr13 55026599 55026742 -65257570 - Tigger7 DNA MER2_type -2314 177 33 6 1004 300 359 71 12 chr13 55027020 55027260 -65257052 + LTR33 LTR ERVL 262 515 0 6 1004 1683 194 102 9 chr13 55027644 55028027 -65256285 + MTD LTR MaLR 1 407 -12 6 1004 183 42 0 0 chr13 55028071 55028095 -65256217 + (CAGAGA)n Simple_repeat Simple_repeat 2 25 0 6 1004 409 198 69 10 chr13 55028792 55028894 -65255418 - PB1D10 SINE Alu -1 116 9 6 1004 332 83 33 0 chr13 55028902 55028962 -65255350 + (TCTCTG)n Simple_repeat Simple_repeat 5 66 0 6 1004 542 252 0 8 chr13 55028993 55029113 -65255199 - B1_Mm SINE Alu -26 121 3 7 1004 757 216 112 5 chr13 55029192 55029404 -65254908 + B4 SINE B4 2 236 -56 7 1004 1212 283 88 15 chr13 55029404 55029860 -65254452 + MT2A LTR ERVL 1 489 -44 7 1004 506 235 0 11 chr13 55029911 55030092 -65254220 + (TA)n Simple_repeat Simple_repeat 2 180 0 7 1004 237 289 0 0 chr13 55030106 55030220 -65254092 + (TA)n Simple_repeat Simple_repeat 2 115 0 7 1004 272 136 0 0 chr13 55030232 55030298 -65254014 + MT2A LTR ERVL 468 533 0 7 1004 317 214 41 92 chr13 55030371 55030469 -65253843 + L1M4b LINE L1 1833 1925 -5409 7 1004 390 129 0 0 chr13 55030473 55030535 -65253777 + (GGGA)n Simple_repeat Simple_repeat 4 65 0 7 1004 523 257 45 32 chr13 55030598 55030755 -65253557 + B3 SINE B2 47 205 -11 7 1004 243 270 38 57 chr13 55031403 55031509 -65252803 - MLT1K LTR MaLR -110 485 382 7 1004 180 0 0 0 chr13 55032099 55032119 -65252193 + (TTG)n Simple_repeat Simple_repeat 2 21 0 7 1004 1260 48 0 0 chr13 55032131 55032278 -65252034 - B1_Mus1 SINE Alu 0 148 2 7 1004 338 272 37 10 chr13 55032384 55032533 -65251779 + MIR3 SINE MIR 21 175 -33 8 1004 815 307 58 37 chr13 55034452 55034834 -65249478 + MER113 DNA MER1_type 127 516 -5 8 1004 233 258 29 29 chr13 55035363 55035431 -65248881 + Tigger14a DNA MER2_type 178 245 -79 8 1004 383 200 29 103 chr13 55035537 55035665 -65248647 - B3A SINE B2 -1 215 85 8 1004 294 369 7 0 chr13 55037978 55038215 -65246097 + (CA)n Simple_repeat Simple_repeat 1 238 0 8 1004 388 322 0 28 chr13 55038303 55038520 -65245792 + (CATATA)n Simple_repeat Simple_repeat 1 210 0 8 1004 281 379 0 17 chr13 55038458 55038638 -65245674 + (CA)n Simple_repeat Simple_repeat 2 178 0 8 1004 420 285 5 43 chr13 55038722 55038909 -65245403 + (CATA)n Simple_repeat Simple_repeat 1 180 0 8 1004 221 154 39 0 chr13 55038949 55039001 -65245311 + (CATG)n Simple_repeat Simple_repeat 3 56 0 8 1004 425 301 6 39 chr13 55039016 55039196 -65245116 + (CATA)n Simple_repeat Simple_repeat 2 175 0 8 1004 217 291 155 28 chr13 55040037 55040288 -65244024 + L2 LINE L2 2783 3065 -354 9 1004 871 182 7 2 chr13 55042279 55042705 -65241607 + CT-rich Low_complexity Low_complexity 1 428 0 9 1004 211 211 0 0 chr13 55043592 55043630 -65240682 + MIRm SINE MIR 124 161 -115 9 1004 384 40 0 0 chr13 55044216 55044266 -65240046 + (TG)n Simple_repeat Simple_repeat 1 50 0 9 1004 206 272 11 32 chr13 55044327 55044422 -65239890 + (TG)n Simple_repeat Simple_repeat 2 94 0 9 1004 381 237 121 14 chr13 55044483 55044624 -65239688 - MER106B DNA MER1_type -4 1055 900 9 1004 2408 78 21 59 chr13 55044658 55044998 -65239314 - ORR1A2 LTR MaLR 0 327 1 9 1004 364 184 10 10 chr13 55046539 55046638 -65237674 + (TG)n Simple_repeat Simple_repeat 2 100 0 9 1004 247 309 127 0 chr13 55046744 55046854 -65237458 + MIRb SINE MIR 81 204 -64 9 1004 228 67 0 0 chr13 55047009 55047039 -65237273 + (TA)n Simple_repeat Simple_repeat 1 30 0 9 1004 666 260 133 0 chr13 55047047 55047243 -65237069 - ID_B1 SINE B4 -1 223 2 9 1004 429 359 173 18 chr13 55047270 55047721 -65236591 - MLT1K LTR MaLR -15 580 60 1 1004 529 215 160 7 chr13 55048318 55048468 -65235844 + MLT1I LTR MaLR 239 411 0 1 1004 199 325 115 25 chr13 55048563 55048751 -65235561 + MIRm SINE MIR 20 221 -47 1 1004 345 76 45 0 chr13 55048940 55049006 -65235306 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 1004 631 257 72 0 chr13 55049128 55049280 -65235032 + RSINE1 SINE B4 3 165 0 1 1004 225 178 0 0 chr13 55049500 55049545 -65234767 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1004 581 263 25 24 chr13 55049546 55049757 -65234555 + Charlie8 DNA MER1_type 326 487 -1941 1 1004 267 274 59 42 chr13 55049930 55050048 -65234264 - MIRb SINE MIR -138 130 11 1 1005 253 82 20 20 chr13 55050674 55050724 -65233588 + (CCCCG)n Simple_repeat Simple_repeat 3 52 0 1 1005 27 100 0 0 chr13 55050741 55050831 -65233481 + GC_rich Low_complexity Low_complexity 1 90 0 1 1005 279 312 13 0 chr13 55055815 55055920 -65228392 + MIRb SINE MIR 7 123 -145 1 1005 23 33 0 0 chr13 55057645 55057675 -65226637 + GC_rich Low_complexity Low_complexity 1 30 0 1 1005 487 187 109 22 chr13 55057987 55058000 -65226312 - B1_Mur3 SINE Alu 0 149 133 1 1005 180 0 0 0 chr13 55058000 55058020 -65226292 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 1 1005 487 187 109 22 chr13 55058020 55058143 -65226169 - B1_Mur3 SINE Alu -17 132 2 1 1005 313 236 43 53 chr13 55058062 55058156 -65226156 - MT2B LTR ERVL -354 247 155 1 1005 243 0 0 0 chr13 55058221 55058248 -65226064 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 1 1005 206 322 43 11 chr13 55058622 55058716 -65225596 - L3 LINE CR1 -186 4303 4207 1 1005 372 295 84 42 chr13 55058891 55059186 -65225126 - MLT1K LTR MaLR -8 602 296 1 1005 1054 133 65 22 chr13 55059836 55059872 -65224440 - B2_Mm2 SINE B2 -2 193 159 1 1005 189 0 0 0 chr13 55059872 55059893 -65224419 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 1005 1054 133 65 22 chr13 55059893 55060041 -65224271 - B2_Mm2 SINE B2 -37 158 2 1 1005 310 320 64 3 chr13 55060280 55060430 -65223882 + MIR SINE MIR 57 214 -48 1 1005 384 319 112 30 chr13 55060961 55061300 -65223012 - L2 LINE L2 -576 2843 2477 1 1005 447 192 141 0 chr13 55062466 55062565 -65221747 + B3A SINE B2 1 113 -85 1 1005 382 170 9 18 chr13 55062565 55062679 -65221633 + (TCTCTG)n Simple_repeat Simple_repeat 2 114 0 1 1005 259 330 55 43 chr13 55063534 55063778 -65220534 - L2a LINE L2 -7 3419 3122 1 1005 252 368 69 9 chr13 55064346 55064579 -65219733 - L1MB8 LINE L1 -41 6137 5891 1 1005 228 135 0 0 chr13 55065253 55065290 -65219022 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1005 475 292 94 5 chr13 55065423 55065636 -65218676 - L1MB8 LINE L1 -437 5737 5506 1 1005 195 100 0 0 chr13 55065939 55065969 -65218343 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1005 324 0 0 0 chr13 55066901 55066937 -65217375 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1005 450 36 0 0 chr13 55067122 55067178 -65217134 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1005 360 298 52 12 chr13 55067888 55068059 -65216253 - MIR SINE MIR -25 243 55 1 1005 347 173 13 39 chr13 55068126 55068204 -65216108 - PB1 SINE Alu 0 127 52 1 1005 220 347 16 25 chr13 55068968 55069089 -65215223 - L2a LINE L2 -99 3327 3208 1 1005 211 189 0 0 chr13 55071832 55071869 -65212443 + C-rich Low_complexity Low_complexity 2 38 0 1 1005 1197 49 0 7 chr13 55072463 55072607 -65211705 - B1_Mus2 SINE Alu 0 147 5 1 1005 228 256 102 150 chr13 55073114 55073173 -65211139 + MLT1A1 LTR MaLR 268 333 -75 1 1005 312 275 12 12 chr13 55073173 55073254 -65211058 + ID2 SINE ID 1 81 -2 1 1005 228 256 102 150 chr13 55073254 55073341 -65210971 + MLT1A1 LTR MaLR 334 407 -1 1 1005 381 300 69 23 chr13 55073584 55073758 -65210554 - MLT1K LTR MaLR -4 591 410 1 1005 288 359 9 0 chr13 55073931 55074037 -65210275 - MLT1K LTR MaLR -468 127 21 1 1005 311 234 140 0 chr13 55075990 55076097 -65208215 + L1ME1 LINE L1 5881 6002 -177 1 1005 204 40 0 0 chr13 55076283 55076308 -65208004 + (AGGGGG)n Simple_repeat Simple_repeat 3 27 0 1 1005 212 283 0 0 chr13 55078517 55078570 -65205742 + C-rich Low_complexity Low_complexity 1 53 0 1 1005 284 280 53 11 chr13 55080537 55080631 -65203681 + MER102b DNA MER1_type 53 150 -191 1 1005 205 323 63 21 chr13 55080734 55080829 -65203483 - MIRm SINE MIR -145 131 33 1 1005 210 309 115 51 chr13 55081672 55081829 -65202483 + MIRc SINE MIR 37 203 -65 1 1005 222 290 28 90 chr13 55082293 55082459 -65201853 + MIRm SINE MIR 23 175 -93 1 1005 250 417 32 0 chr13 55084727 55084883 -65199429 - MIRm SINE MIR -1 275 115 1 1005 222 329 79 18 chr13 55084839 55085003 -65199309 - L2b LINE L2 -158 3229 3056 1 1005 1057 220 85 119 chr13 55086366 55086753 -65197559 - MTE2a LTR MaLR 0 379 6 1 1005 450 0 0 0 chr13 55086971 55087021 -65197291 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1005 223 234 0 0 chr13 55089397 55089444 -65194868 + BC1_Mm scRNA scRNA 28 74 -78 1 1005 225 0 0 0 chr13 55089590 55089615 -65194697 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 1005 579 15 0 0 chr13 55089615 55089682 -65194630 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 1005 844 190 144 62 chr13 55090654 55090862 -65193450 + URR1B DNA MER1_type 1 225 0 1 1005 221 313 110 25 chr13 55091029 55091147 -65193165 - MIRb SINE MIR -123 145 18 1 1005 468 0 0 0 chr13 55091154 55091206 -65193106 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1005 4017 129 56 153 chr13 55091206 55092183 -65192129 - RMER17B LTR ERVK -22 936 2 1 1005 240 308 59 111 chr13 55100029 55100376 -65183936 - MLT1A1 LTR MaLR -53 321 1 1 1005 213 330 77 23 chr13 55101581 55101801 -65182511 + L2 LINE L2 1943 2174 -1245 1 1005 350 325 52 71 chr13 55101883 55102264 -65182048 + L2 LINE L2 2351 2724 -695 1 1005 206 308 79 70 chr13 55105425 55105652 -65178660 - L2c LINE L2 -166 3221 2993 1 1005 195 42 0 0 chr13 55106616 55106640 -65177672 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1005 23 0 0 0 chr13 55107351 55107374 -65176938 + AT_rich Low_complexity Low_complexity 1 23 0 1 1005 231 316 139 9 chr13 55109675 55109790 -65174522 - MIRb SINE MIR -71 197 68 1 1005 205 283 0 0 chr13 55109803 55109849 -65174463 - MIRc SINE MIR -122 146 101 1 1005 288 0 0 0 chr13 55111218 55111250 -65173062 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1005 36 54 0 13 chr13 55112847 55112882 -65171430 + AT_rich Low_complexity Low_complexity 1 35 0 1 1005 1498 116 98 4 chr13 55112882 55113116 -65171196 - Lx2 LINE L1 -1 6996 6741 1 1005 36 54 0 13 chr13 55113116 55113155 -65171157 + AT_rich Low_complexity Low_complexity 1 39 0 1 1005 1077 80 0 0 chr13 55114293 55114431 -65169881 - B1_Mus2 SINE Alu -9 138 1 1 1005 326 220 0 0 chr13 55118235 55118294 -65166018 + B1_Mur1 SINE Alu 80 138 -11 1 1005 297 68 0 0 chr13 55118513 55118557 -65165755 + (CAGA)n Simple_repeat Simple_repeat 2 45 0 1 1005 232 250 22 22 chr13 55118969 55119059 -65165253 + (ATGTG)n Simple_repeat Simple_repeat 3 92 0 1 1005 462 18 0 0 chr13 55119390 55119445 -65164867 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1005 234 0 0 0 chr13 55119847 55119873 -65164439 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 1005 489 214 10 0 chr13 55121799 55121902 -65162410 + PB1D10 SINE Alu 6 109 -8 1 1005 351 0 0 0 chr13 55121962 55122001 -65162311 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1005 273 57 0 0 chr13 55123041 55123076 -65161236 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1005 405 0 0 0 chr13 55123322 55123367 -65160945 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1005 266 265 13 13 chr13 55125465 55125540 -65158772 - RSINE1 SINE B4 -216 76 3 1 1005 708 199 34 47 chr13 55125840 55125988 -65158324 - B1_Mur2 SINE Alu -1 148 3 1 1005 250 306 117 0 chr13 55126085 55126196 -65158116 - MER96 DNA hAT -1 174 51 1 1005 264 342 94 20 chr13 55126284 55126433 -65157879 - LTR16C LTR ERVL -180 309 150 1 1005 225 241 68 0 chr13 55126872 55126967 -65157345 - MIRc SINE MIR -48 220 108 1 1005 2390 100 0 49 chr13 55127084 55127430 -65156882 + ORR1A4 LTR MaLR 1 329 0 1 1005 2986 46 52 0 chr13 55127833 55128202 -65156110 + RLTR10 LTR ERVK 1 388 -2 1 1005 1484 23 6 0 chr13 55128214 55128385 -65155927 + RLTR10-int LTR ERVK 41 212 -1775 1 1005 293 168 38 95 chr13 55128410 55128515 -65155797 + RLTR10 LTR ERVK 292 390 0 1 1005 3975 42 51 0 chr13 55128515 55129103 -65155209 + RLTR10-int LTR ERVK 302 992 -995 1 1005 21 0 0 0 chr13 55129661 55129682 -65154630 + AT_rich Low_complexity Low_complexity 1 21 0 1 1005 447 187 0 0 chr13 55130165 55130240 -65154072 - B3 SINE B2 -141 75 1 1 1005 1068 84 0 19 chr13 55131686 55131844 -65152468 + B2_Mm2 SINE B2 1 155 -40 1 1005 477 0 0 0 chr13 55131845 55131898 -65152414 + (GAAA)n Simple_repeat Simple_repeat 4 56 0 1 1005 1350 67 0 0 chr13 55131898 55132075 -65152237 + (GA)n Simple_repeat Simple_repeat 2 179 0 1 1005 284 247 0 22 chr13 55132075 55132166 -65152146 + GA-rich Low_complexity Low_complexity 1 89 0 1 1005 488 252 92 0 chr13 55132584 55132703 -65151609 + B1_Mus2 SINE Alu 3 132 -15 1 1005 229 89 22 22 chr13 55132703 55132749 -65151563 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 1 1005 651 230 30 45 chr13 55132816 55133016 -65151296 + B3 SINE B2 20 216 0 1 1005 917 227 20 25 chr13 55133117 55133316 -65150996 + B3 SINE B2 15 212 -4 1 1005 889 206 46 15 chr13 55133424 55133621 -65150691 + B3 SINE B2 14 216 0 1 1005 1145 72 150 0 chr13 55134058 55134225 -65150087 - B2_Mm1a SINE B2 0 193 2 1 1005 366 189 194 19 chr13 55134229 55134337 -65149975 - B1F SINE Alu -1 148 22 1 1005 227 319 106 0 chr13 55134500 55134594 -65149718 - ID_B1 SINE B4 -39 185 82 1 1005 538 234 32 19 chr13 55134646 55134803 -65149509 - RCHARR1 DNA MER1_type 0 974 816 1 1005 1207 63 46 6 chr13 55134775 55134950 -65149362 - B2_Mm2 SINE B2 -8 187 6 2 1005 379 165 78 9 chr13 55134955 55135071 -65149241 - RCHARR1 DNA MER1_type -97 877 754 1 1005 712 269 25 19 chr13 55135092 55135287 -65149025 - ID_B1 SINE B4 -1 223 32 2 1005 1383 175 58 7 chr13 55135297 55135606 -65148706 - RCHARR1 DNA MER1_type -214 760 436 1 1005 428 325 89 15 chr13 55135606 55135809 -65148503 + B4A SINE B4 1 218 -74 2 1005 652 196 7 7 chr13 55135845 55135994 -65148318 - RCHARR1 DNA MER1_type -560 414 266 1 1005 355 225 44 11 chr13 55136008 55136098 -65148214 + B4 SINE B4 186 278 -14 2 1005 3563 223 109 11 chr13 55137451 55138446 -65145866 + MMAR1 DNA Mariner 1 1093 -193 2 1005 429 224 35 0 chr13 55138460 55138545 -65145767 + RSINE1 SINE B4 45 132 -33 2 1005 535 222 76 32 chr13 55138597 55138755 -65145557 + MMAR1 DNA Mariner 1097 1261 -25 2 1005 255 362 0 0 chr13 55138922 55138991 -65145321 + tRNA-Ala-GCY_ tRNA tRNA 1 69 -6 2 1005 596 242 185 4 chr13 55139273 55139505 -65144807 + L1MA6 LINE L1 6000 6273 -27 2 1005 1313 224 170 27 chr13 55139540 55140092 -65144220 + Lx9 LINE L1 7012 7642 -2 2 1005 1580 39 107 5 chr13 55140094 55140300 -65144012 - L1Md_A LINE L1 -1 6581 6355 2 1005 5622 55 0 0 chr13 55140300 55140991 -65143321 - L1_Mm LINE L1 -460 5423 4733 2 1005 3556 54 0 2 chr13 55140990 55141446 -65142866 + Lx3_Mus LINE L1 5471 5918 -1091 2 1005 1199 28 14 0 chr13 55142066 55142209 -65142103 + B1_Mus2 SINE Alu 3 147 0 2 1005 545 277 94 0 chr13 55142922 55143081 -65141231 + B4 SINE B4 23 196 -96 2 1005 849 124 48 24 chr13 55143120 55143285 -65141027 + B2_Mm2 SINE B2 3 171 -24 2 1005 732 103 0 0 chr13 55143341 55143448 -65140864 + (GA)n Simple_repeat Simple_repeat 2 108 0 2 1005 217 274 154 19 chr13 55143490 55143594 -65140718 + RSINE1 SINE B4 18 135 -30 2 1005 24 32 0 0 chr13 55143642 55143673 -65140639 + AT_rich Low_complexity Low_complexity 1 31 0 2 1005 229 304 14 0 chr13 55144150 55144219 -65140093 - B4 SINE B4 -222 70 1 2 1005 1307 88 39 0 chr13 55144350 55144531 -65139781 + B2_Mm2 SINE B2 2 189 -6 2 1005 937 134 0 13 chr13 55144636 55144787 -65139525 - B1_Mur4 SINE Alu 0 150 2 2 1005 276 270 40 10 chr13 55145049 55145150 -65139162 + RMER15 LTR ERVL 422 525 -50 2 1005 288 284 20 40 chr13 55145449 55145548 -65138764 + ID_B1 SINE B4 64 160 -64 2 1005 357 262 12 0 chr13 55145476 55145556 -65138756 + B1F1 SINE Alu 11 91 -58 2 1005 285 29 0 0 chr13 55146350 55146384 -65137928 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1005 779 153 0 0 chr13 55146385 55146516 -65137796 - B1_Mus2 SINE Alu -12 135 5 2 1005 421 206 13 134 chr13 55146408 55146565 -65137747 - MT2B LTR ERVL -337 264 127 2 1005 262 352 102 0 chr13 55146749 55146877 -65137435 - MIRb SINE MIR -122 146 6 2 1005 279 287 81 88 chr13 55146888 55147148 -65137164 + L2a LINE L2 2733 2990 -429 2 1005 2137 161 103 0 chr13 55147205 55147583 -65136729 - MTD LTR MaLR 0 419 3 2 1005 678 239 71 43 chr13 55147602 55147980 -65136332 + MT2B LTR ERVL 1 490 -111 2 1005 313 100 0 39 chr13 55148082 55148134 -65136178 + MT2B LTR ERVL 535 584 0 2 1005 191 263 76 158 chr13 55148151 55148193 -65136119 + L2a LINE L2 3102 3143 -283 2 1005 369 0 0 0 chr13 55148193 55148234 -65136078 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2 1005 764 183 166 0 chr13 55148234 55148409 -65135903 - B3 SINE B2 -12 204 1 2 1005 191 263 76 158 chr13 55148409 55148523 -65135789 + L2a LINE L2 3144 3245 -181 2 1005 862 286 5 15 chr13 55148559 55148761 -65135551 + B4 SINE B4 89 288 -4 2 1005 265 297 88 0 chr13 55148800 55148891 -65135421 + L2a LINE L2 3240 3338 -88 2 1005 516 290 109 22 chr13 55149990 55150219 -65134093 + B4A SINE B4 9 257 -35 2 1005 812 241 110 73 chr13 55150309 55150717 -65133595 - RLTR12B LTR ERVK -74 454 32 2 1005 218 283 19 0 chr13 55150725 55150778 -65133534 - RSINE1 SINE B4 -111 54 1 2 1005 695 186 50 7 chr13 55151687 55151828 -65132484 + B1_Mus2 SINE Alu 1 147 0 2 1005 1136 82 6 0 chr13 55151828 55151987 -65132325 + B2_Mm1t SINE B2 1 160 -33 2 1005 207 0 0 0 chr13 55151987 55152010 -65132302 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 2 1005 333 102 0 0 chr13 55152019 55152078 -65132234 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 2 1005 2334 148 8 2 chr13 55152673 55153072 -65131240 - MTC LTR MaLR -17 404 4 2 1005 391 298 19 11 chr13 55153114 55153229 -65131083 - RSINE1 SINE B4 -169 123 3 2 1005 430 267 20 10 chr13 55153873 55153975 -65130337 + RSINE1 SINE B4 8 110 -55 2 1005 192 40 0 0 chr13 55154026 55154051 -65130261 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1005 699 105 0 34 chr13 55154288 55154406 -65129906 - B1_Mus1 SINE Alu -1 147 34 2 1005 1502 50 0 6 chr13 55154592 55154775 -65129537 + B2_Mm2 SINE B2 1 182 -13 2 1005 1449 65 5 16 chr13 55155006 55155193 -65129119 + B2_Mm1a SINE B2 1 185 -8 2 1005 856 143 29 0 chr13 55155204 55155344 -65128968 + B1_Mur4 SINE Alu 1 144 -6 2 1005 279 225 33 28 chr13 55155393 55155496 -65128816 + PB1D9 SINE Alu 24 123 -24 2 1005 768 257 26 87 chr13 55156068 55156332 -65127980 + B4A SINE B4 1 248 -44 2 1005 378 0 0 0 chr13 55156341 55156383 -65127929 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1005 708 74 0 0 chr13 55156402 55156497 -65127815 + (GAGAA)n Simple_repeat Simple_repeat 4 98 0 2 1005 501 143 24 0 chr13 55156504 55156588 -65127724 - B1_Mm SINE Alu -20 127 42 2 1005 313 163 0 0 chr13 55156588 55156637 -65127675 + (TCTCTG)n Simple_repeat Simple_repeat 2 50 0 2 1005 781 180 7 0 chr13 55157016 55157155 -65127157 + B1_Mur4 SINE Alu 11 150 0 2 1005 440 235 181 36 chr13 55157555 55157776 -65126536 - L1ME1 LINE L1 -12 6167 5915 2 1005 215 288 118 55 chr13 55157778 55157888 -65126424 + PB1D10 SINE Alu 1 117 0 2 1005 510 262 85 0 chr13 55157891 55158055 -65126257 - L1ME1 LINE L1 -269 5910 5733 2 1005 1431 54 49 0 chr13 55158200 55158384 -65125928 + B2_Mm2 SINE B2 1 193 -2 2 1005 678 272 48 19 chr13 55158516 55158722 -65125590 + MER58A DNA MER1_type 1 212 -12 2 1005 21 0 0 0 chr13 55158794 55158815 -65125497 + AT_rich Low_complexity Low_complexity 1 21 0 2 1005 330 256 21 53 chr13 55159067 55159162 -65125150 + MTEa LTR MaLR 1 92 -287 2 1005 714 203 46 20 chr13 55159467 55159618 -65124694 + B3 SINE B2 1 155 -61 2 1005 272 196 44 17 chr13 55159766 55159843 -65124469 - B3 SINE B2 -134 82 1 2 1005 236 146 17 68 chr13 55159923 55159982 -65124330 + C-rich Low_complexity Low_complexity 1 56 0 2 1005 1112 38 0 0 chr13 55160991 55161123 -65123189 + B1_Mus2 SINE Alu 2 133 -14 2 1005 378 0 0 0 chr13 55161123 55161165 -65123147 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 2 1005 1351 97 38 0 chr13 55163149 55163335 -65120977 + B2_Mm2 SINE B2 3 195 0 2 1005 641 144 132 116 chr13 55163454 55163643 -65120669 + B2_Mm2 SINE B2 3 194 -1 2 1005 711 211 178 0 chr13 55164128 55164308 -65120004 + B3 SINE B2 5 216 0 2 1005 412 276 70 16 chr13 55165188 55165317 -65118995 - RSINE1 SINE B4 -6 159 24 2 1005 571 204 9 0 chr13 55165344 55165457 -65118855 - B1_Mur2 SINE Alu 0 149 36 2 1005 1025 124 16 22 chr13 55165629 55165811 -65118501 + B2_Mm2 SINE B2 15 195 0 2 1005 246 59 0 0 chr13 55165820 55165836 -65118476 + (A)n Simple_repeat Simple_repeat 1 16 0 2 1005 1114 57 50 0 chr13 55165836 55165976 -65118336 + B1_Mus2 SINE Alu 1 147 0 2 1005 246 59 0 0 chr13 55165976 55165993 -65118319 + (A)n Simple_repeat Simple_repeat 1 17 0 2 1005 1341 89 26 5 chr13 55166307 55166498 -65117814 - B2_Mm2 SINE B2 0 195 1 2 1005 1216 48 0 0 chr13 55167100 55167245 -65117067 + B1_Mus2 SINE Alu 1 145 -2 2 1005 255 164 13 52 chr13 55167256 55167333 -65116979 + GA-rich Low_complexity Low_complexity 3 76 0 2 1005 335 255 104 0 chr13 55167369 55167475 -65116837 + B3 SINE B2 4 120 -96 2 1005 701 206 14 34 chr13 55167662 55167808 -65116504 + B1_Mur2 SINE Alu 1 143 -6 2 1005 446 277 125 44 chr13 55168359 55169115 -65115197 + L1MEf LINE L1 2023 3100 -3482 2 1005 824 193 14 0 chr13 55169115 55169260 -65115052 + B1_Mur2 SINE Alu 3 149 0 2 1005 783 18 11 84 chr13 55169300 55169479 -65114833 + (GGGAA)n Simple_repeat Simple_repeat 1 166 0 2 1005 1040 62 0 58 chr13 55169479 55169669 -65114643 + (GGAAA)n Simple_repeat Simple_repeat 1 179 0 2 1005 278 201 84 81 chr13 55169670 55169781 -65114531 + L1MA4A LINE L1 5371 5542 -758 2 1005 211 312 12 0 chr13 55169794 55169874 -65114438 + GA-rich Low_complexity Low_complexity 1 81 0 2 1005 841 244 70 58 chr13 55169874 55170187 -65114125 + L1MA4A LINE L1 5602 5918 -385 2 1005 594 162 19 0 chr13 55170307 55170412 -65113900 + B1_Mur3 SINE Alu 43 149 0 2 1005 1145 62 7 7 chr13 55170465 55170611 -65113701 + B1_Mus2 SINE Alu 1 146 -1 2 1005 293 264 213 63 chr13 55171232 55171303 -65113009 - B4 SINE B4 -6 286 87 2 1005 324 248 175 19 chr13 55171303 55171406 -65112906 - PB1D7 SINE Alu 0 120 2 2 1005 570 231 0 32 chr13 55171471 55171596 -65112716 - RSINE1 SINE B4 -17 148 28 2 1005 253 189 179 53 chr13 55171589 55171684 -65112628 - B4A SINE B4 -64 228 122 2 1005 1403 91 16 0 chr13 55171806 55171993 -65112319 + B2_Mm2 SINE B2 2 191 -4 2 1005 685 229 28 0 chr13 55172061 55172205 -65112107 + B1_Mur2 SINE Alu 2 149 0 2 1005 561 170 45 36 chr13 55172212 55172322 -65111990 + B1_Mur2 SINE Alu 3 113 -36 2 1005 587 242 8 8 chr13 55172571 55172692 -65111620 + RSINE1 SINE B4 4 124 -41 2 1005 576 0 0 0 chr13 55172694 55172758 -65111554 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 1005 222 264 19 0 chr13 55172938 55172991 -65111321 + RSINE1 SINE B4 90 143 -22 2 1005 475 208 50 0 chr13 55173223 55173324 -65110988 + B3 SINE B2 1 106 -110 2 1005 772 47 0 0 chr13 55173394 55173500 -65110812 - B1_Mus2 SINE Alu -1 146 41 3 1005 298 223 51 127 chr13 55173396 55173514 -65110798 - B4 SINE B4 -69 223 115 3 1005 204 308 11 34 chr13 55173654 55173712 -65110600 + MIRb SINE MIR 61 120 -148 3 1005 2482 70 6 23 chr13 55173712 55174062 -65110250 - L1_Mus3 LINE L1 -3 6635 6292 3 1005 204 303 11 33 chr13 55174062 55174112 -65110200 + MIRb SINE MIR 121 169 -99 3 1005 331 259 68 34 chr13 55174321 55174409 -65109903 + RSINE1 SINE B4 65 155 -10 3 1005 297 0 0 0 chr13 55174411 55174444 -65109868 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1005 401 91 30 0 chr13 55174444 55174510 -65109802 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 3 1005 247 338 107 23 chr13 55174510 55174725 -65109587 + L1MC LINE L1 5425 5657 -2225 3 1005 718 257 40 72 chr13 55174957 55175179 -65109133 + ID_B1 SINE B4 10 224 0 3 1005 1406 240 73 57 chr13 55175210 55175521 -65108791 + RMER5 LTR ERV1 33 374 -160 3 1005 601 232 130 10 chr13 55175521 55175713 -65108599 - B3 SINE B2 -1 215 1 3 1005 1406 240 73 57 chr13 55175713 55175895 -65108417 + RMER5 LTR ERV1 375 534 0 3 1005 23 33 0 0 chr13 55175919 55175949 -65108363 + AT_rich Low_complexity Low_complexity 1 30 0 3 1005 324 0 0 0 chr13 55176336 55176372 -65107940 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1005 365 198 186 0 chr13 55176372 55176458 -65107854 - PB1D10 SINE Alu -10 107 6 3 1005 240 300 16 16 chr13 55178002 55178063 -65106249 + PB1 SINE Alu 8 68 -59 3 1005 765 166 34 27 chr13 55178244 55178393 -65105919 - B1_Mur4 SINE Alu 0 150 1 3 1005 798 182 0 13 chr13 55179059 55179209 -65105103 + B1_Mur4 SINE Alu 3 150 0 3 1005 196 387 9 9 chr13 55179246 55179353 -65104959 + L2a LINE L2 3302 3408 -18 3 1005 494 258 25 25 chr13 55179646 55179809 -65104503 + L1MC5 LINE L1 6713 6875 -1086 3 1005 200 116 0 65 chr13 55179870 55179884 -65104428 + A-rich Low_complexity Low_complexity 2 14 0 3 1005 1175 62 0 7 chr13 55179884 55180031 -65104281 + B1_Mm SINE Alu 2 147 0 3 1005 200 116 0 65 chr13 55180031 55180062 -65104250 + A-rich Low_complexity Low_complexity 15 44 0 3 1005 442 301 27 73 chr13 55180148 55180218 -65104094 + Lx8 LINE L1 7263 7331 -142 3 1005 1833 158 203 88 chr13 55180218 55180648 -65103664 + MT2A LTR ERVL 1 485 -48 3 1005 585 72 0 0 chr13 55180648 55180731 -65103581 + (CA)n Simple_repeat Simple_repeat 2 84 0 3 1005 1833 158 203 88 chr13 55180731 55180778 -65103534 + MT2A LTR ERVL 486 532 -1 3 1005 442 301 27 73 chr13 55180778 55180926 -65103386 + Lx8 LINE L1 7332 7471 -2 3 1006 616 172 7 92 chr13 55181313 55181454 -65102858 + B1_Mm SINE Alu 2 130 -17 3 1006 245 224 85 17 chr13 55181617 55181676 -65102636 + ID4_ SINE ID 10 72 -11 3 1006 3748 136 93 60 chr13 55181683 55182409 -65101903 - RMER1A Other Other -16 1326 264 3 1006 1282 106 26 16 chr13 55182426 55182617 -65101695 - B2_Mm2 SINE B2 -2 193 1 3 1006 613 283 98 35 chr13 55182620 55182986 -65101326 - L1M4 LINE L1 -2419 3727 3339 3 1006 1347 231 75 20 chr13 55183067 55183425 -65100887 + MTD LTR MaLR 28 405 -14 3 1006 2453 198 59 63 chr13 55183812 55184607 -65099705 + RMER19B LTR ERVK 1 902 0 3 1006 270 238 74 7 chr13 55184721 55184740 -65099572 + ORR1B1-int LTR MaLR 597 615 -894 3 1006 1187 68 0 0 chr13 55184740 55184888 -65099424 + B1_Mus1 SINE Alu 1 148 0 3 1006 270 238 74 7 chr13 55184888 55184909 -65099403 + ORR1B1-int LTR MaLR 616 647 -862 3 1006 842 45 0 0 chr13 55184909 55185020 -65099292 + B1_Mus2 SINE Alu 1 111 -36 3 1006 1691 310 112 82 chr13 55185018 55185471 -65098841 - Charlie8 DNA MER1_type -268 2160 1751 3 1006 3000 65 0 10 chr13 55185471 55185858 -65098454 - L1Md_F2 LINE L1 0 6582 6200 3 1006 1691 310 112 82 chr13 55185858 55186496 -65097816 - Charlie8 DNA MER1_type -678 1750 1037 3 1006 548 285 42 12 chr13 55186577 55186744 -65097568 + B3A SINE B2 1 172 -26 3 1006 22 35 0 0 chr13 55187734 55187763 -65096549 + AT_rich Low_complexity Low_complexity 1 29 0 3 1006 848 35 9 0 chr13 55188167 55188281 -65096031 + B1_Mus1 SINE Alu 34 148 0 3 1006 294 230 17 152 chr13 55188316 55188434 -65095878 + MT2B LTR ERVL 156 257 -344 3 1006 702 171 0 39 chr13 55188332 55188460 -65095852 + B1_Mur4 SINE Alu 7 129 -21 3 1006 655 141 8 15 chr13 55188460 55188590 -65095722 + GA-rich Low_complexity Low_complexity 1 129 0 3 1006 441 301 108 25 chr13 55188793 55188969 -65095343 + L1MC4 LINE L1 1853 2046 -4169 3 1006 2224 125 21 43 chr13 55188969 55189344 -65094968 + ORR1B2 LTR MaLR 1 367 0 3 1006 441 301 108 25 chr13 55189344 55189371 -65094941 + L1MC4 LINE L1 2047 2073 -4142 3 1006 198 0 0 0 chr13 55189380 55189402 -65094910 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 1006 650 148 37 0 chr13 55189503 55189611 -65094701 + B1_Mur1 SINE Alu 32 143 -6 3 1006 531 0 0 0 chr13 55189747 55189806 -65094506 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1006 573 289 56 26 chr13 55189840 55190012 -65094300 + ORR1E LTR MaLR 118 293 -66 3 1006 180 77 0 0 chr13 55190012 55190038 -65094274 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 3 1006 573 289 56 26 chr13 55190038 55190096 -65094216 + ORR1E LTR MaLR 294 354 -5 3 1006 1108 88 0 0 chr13 55190098 55190245 -65094067 + B1_Mm SINE Alu 1 147 0 3 1006 234 0 0 0 chr13 55190249 55190275 -65094037 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1006 1700 31 0 0 chr13 55190275 55190467 -65093845 + B2_Mm1t SINE B2 2 193 0 3 1006 1494 252 36 21 chr13 55190487 55190872 -65093440 + MTE-int LTR MaLR 7 397 -1183 3 1006 252 325 108 25 chr13 55190919 55191039 -65093273 + MTE-int LTR MaLR 654 783 -797 3 1006 933 56 0 0 chr13 55191009 55191134 -65093178 + B1_Mus1 SINE Alu 24 148 0 3 1006 269 252 56 112 chr13 55191013 55191156 -65093156 + B4A SINE B4 112 246 -46 3 1006 859 85 0 48 chr13 55191156 55191409 -65092903 + (GAAA)n Simple_repeat Simple_repeat 1 240 0 3 1006 1348 286 30 10 chr13 55191411 55191786 -65092526 + MTE-int LTR MaLR 418 1133 -447 3 1006 708 170 35 14 chr13 55191897 55192040 -65092272 - B1_Mur3 SINE Alu -1 148 3 3 1006 245 292 0 40 chr13 55192051 55192126 -65092186 - ID4 SINE ID -4 79 8 3 1006 1440 85 0 5 chr13 55192172 55192362 -65091950 + B2_Mm2 SINE B2 1 189 -6 3 1006 228 67 0 0 chr13 55192363 55192393 -65091919 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1006 208 160 60 0 chr13 55192426 55192476 -65091836 + (CAAA)n Simple_repeat Simple_repeat 3 55 0 3 1006 484 212 190 18 chr13 55192559 55192722 -65091590 + B3A SINE B2 1 191 -7 3 1006 3638 178 126 19 chr13 55192741 55193544 -65090768 + Lx7 LINE L1 6804 7692 -4 3 1006 235 237 13 13 chr13 55193563 55193640 -65090672 + GA-rich Low_complexity Low_complexity 3 79 0 3 1006 246 271 14 0 chr13 55194803 55194873 -65089439 + (TA)n Simple_repeat Simple_repeat 1 71 0 3 1006 478 160 147 31 chr13 55195215 55195344 -65088968 + ORR1B2 LTR MaLR 1 144 -223 3 1006 1079 188 40 0 chr13 55195291 55195514 -65088798 - ORR1C1 LTR MaLR -49 329 98 3 1006 1414 74 5 26 chr13 55195542 55195736 -65088576 + B2_Mm1a SINE B2 2 191 -2 3 1006 265 288 38 53 chr13 55195749 55195881 -65088431 - L1M4 LINE L1 -1107 5039 4910 3 1006 432 261 124 82 chr13 55195911 55196461 -65087851 + L1MB8 LINE L1 4605 5177 -969 3 1006 692 199 0 14 chr13 55196565 55196703 -65087609 + B3 SINE B2 79 214 -2 3 1006 348 241 140 51 chr13 55196720 55197278 -65087034 + L1MB8 LINE L1 5688 6170 -8 3 1006 7994 60 8 0 chr13 55197315 55198330 -65085982 + L1_Mus1 LINE L1 5546 6567 0 3 1006 25 31 0 0 chr13 55198330 55198362 -65085950 + AT_rich Low_complexity Low_complexity 1 32 0 3 1006 588 196 45 0 chr13 55198571 55198683 -65085629 - B1_Mur1 SINE Alu -32 117 1 3 1006 23 33 0 0 chr13 55198777 55198807 -65085505 + AT_rich Low_complexity Low_complexity 1 30 0 3 1006 335 254 0 0 chr13 55198812 55198883 -65085429 + tRNA-Ala-GCY_ tRNA tRNA 2 72 -3 3 1006 253 206 101 14 chr13 55198976 55199045 -65085267 + ID4 SINE ID 2 76 -7 3 1006 21 0 0 0 chr13 55199320 55199341 -65084971 + AT_rich Low_complexity Low_complexity 1 21 0 3 1006 1271 96 45 0 chr13 55199341 55199518 -65084794 - B2_Mm2 SINE B2 -9 186 2 3 1006 977 45 113 0 chr13 55199533 55199666 -65084646 - B1_Mus1 SINE Alu 0 148 1 3 1006 58 15 0 0 chr13 55199723 55199788 -65084524 + AT_rich Low_complexity Low_complexity 1 65 0 3 1006 1221 55 0 0 chr13 55199795 55199940 -65084372 + B1_Mus1 SINE Alu 1 145 -3 3 1006 396 138 0 0 chr13 55199941 55200006 -65084306 + (TAA)n Simple_repeat Simple_repeat 1 65 0 3 1006 751 164 8 0 chr13 55200008 55200136 -65084176 + B1_Mur1 SINE Alu 21 149 0 3 1006 477 0 0 0 chr13 55200288 55200341 -65083971 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1006 391 165 42 42 chr13 55201075 55201170 -65083142 + B1F1 SINE Alu 37 131 -18 3 1006 199 115 19 37 chr13 55201639 55201693 -65082619 + (CGGGG)n Simple_repeat Simple_repeat 4 56 0 3 1006 562 140 51 3 chr13 55201987 55202109 -65082203 + RMER1A Other Other 921 1030 0 3 1006 1253 34 0 13 chr13 55202319 55202468 -65081844 + B1_Mm SINE Alu 1 147 0 3 1006 1266 42 132 0 chr13 55202514 55202681 -65081631 + B2_Mm2 SINE B2 1 189 -6 3 1006 2047 55 11 58 chr13 55203301 55203833 -65080479 - RLTR10C LTR ERVK -47 389 1 3 1006 234 0 0 0 chr13 55204141 55204167 -65080145 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1006 1056 110 0 0 chr13 55204258 55204403 -65079909 - B1_Mus2 SINE Alu -1 146 2 3 1006 623 270 68 54 chr13 55204404 55204682 -65079630 + ORR1D2 LTR MaLR 56 337 -33 3 1006 345 216 0 26 chr13 55204749 55204825 -65079487 - RSINE1 SINE B4 -76 89 16 3 1006 796 196 27 40 chr13 55205149 55205298 -65079014 + B1_Mur2 SINE Alu 1 147 -2 3 1006 258 116 0 0 chr13 55205303 55205346 -65078966 + (TAA)n Simple_repeat Simple_repeat 2 44 0 3 1006 335 207 35 47 chr13 55205696 55205782 -65078530 - B1F SINE Alu -63 86 2 3 1006 236 275 43 11 chr13 55205821 55205913 -65078399 - PB1D10 SINE Alu 0 117 23 4 1006 259 323 0 0 chr13 55205959 55206021 -65078291 - B1F SINE Alu -86 63 2 4 1006 317 324 39 0 chr13 55206034 55206136 -65078176 - PB1D10 SINE Alu -8 109 4 4 1006 1204 48 0 0 chr13 55206207 55206353 -65077959 + B1_Mus2 SINE Alu 2 147 0 4 1006 806 252 59 5 chr13 55207999 55208202 -65076110 - B3 SINE B2 -2 214 1 4 1006 312 289 25 146 chr13 55208318 55208414 -65075898 + ID_B1 SINE B4 82 180 -44 4 1006 646 126 141 16 chr13 55208414 55208535 -65075777 + B1_Mus1 SINE Alu 1 136 -12 4 1006 312 289 25 146 chr13 55208535 55208596 -65075716 + ID_B1 SINE B4 181 220 -4 4 1006 3233 141 183 76 chr13 55208763 55209567 -65074745 - RMER19B LTR ERVK -12 890 1 4 1006 518 285 32 44 chr13 55209792 55209950 -65074362 - B3A SINE B2 -42 156 1 4 1006 229 53 52 35 chr13 55209964 55210022 -65074290 - B2_Mm2 SINE B2 0 195 137 4 1006 1226 113 11 0 chr13 55210113 55210290 -65074022 - B2_Mm1t SINE B2 -14 179 1 4 1006 390 235 29 39 chr13 55210303 55210405 -65073907 - RSINE1 SINE B4 0 165 65 4 1006 388 186 242 20 chr13 55210403 55210502 -65073810 - B1_Mur1 SINE Alu -28 121 1 4 1006 530 256 18 59 chr13 55210526 55210696 -65073616 - RSINE1 SINE B4 0 165 3 4 1006 512 275 13 9 chr13 55210752 55210937 -65073375 - L1MA4A LINE L1 -383 5917 5741 4 1006 251 337 59 0 chr13 55210976 55211077 -65073235 - RSINE1 SINE B4 -57 108 2 4 1006 389 253 0 10 chr13 55211247 55211343 -65072969 + B3A SINE B2 1 95 -103 4 1006 288 106 0 0 chr13 55211371 55211384 -65072928 + (A)n Simple_repeat Simple_repeat 1 13 0 4 1006 1224 34 0 0 chr13 55211384 55211530 -65072782 + B1_Mm SINE Alu 2 147 0 4 1006 288 106 0 0 chr13 55211530 55211563 -65072749 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1006 1171 73 0 43 chr13 55211810 55211997 -65072315 + B2_Mm2 SINE B2 2 180 -15 4 1006 203 317 29 0 chr13 55212131 55212235 -65072077 + (TCTG)n Simple_repeat Simple_repeat 3 109 0 4 1006 578 128 138 0 chr13 55212728 55212837 -65071475 + B1_Mur2 SINE Alu 1 124 -25 4 1006 799 231 102 21 chr13 55212838 55213024 -65071288 + B3 SINE B2 3 203 -13 4 1006 2280 182 192 21 chr13 55213024 55213546 -65070766 - RMER19C LTR ERVK 0 611 1 4 1006 183 100 0 0 chr13 55213683 55213713 -65070599 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1006 1190 75 0 0 chr13 55213716 55213863 -65070449 + B1_Mus2 SINE Alu 1 147 0 4 1006 491 275 35 7 chr13 55213881 55214024 -65070288 - B1_Mur1 SINE Alu -2 147 1 4 1006 345 321 193 0 chr13 55214703 55214921 -65069391 + MIRb SINE MIR 6 265 -3 4 1006 250 298 145 0 chr13 55215167 55215291 -65069021 + MIRb SINE MIR 6 147 -121 4 1006 695 216 7 0 chr13 55215305 55215444 -65068868 + ID_B1 SINE B4 84 223 -1 4 1006 185 294 0 0 chr13 55215832 55215883 -65068429 + MIRc SINE MIR 67 117 -151 4 1006 480 262 187 43 chr13 55217209 55217396 -65066916 + ID_B1 SINE B4 2 215 -9 4 1006 510 83 0 0 chr13 55217916 55217988 -65066324 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 1006 366 252 56 0 chr13 55218290 55218397 -65065915 + ID_B1 SINE B4 94 206 -18 4 1006 210 252 175 0 chr13 55218306 55218409 -65065903 + B1F SINE Alu 29 149 0 4 1006 1020 160 40 72 chr13 55218548 55218770 -65065542 - URR1B DNA MER1_type -10 215 1 4 1006 22 0 0 0 chr13 55219670 55219692 -65064620 + AT_rich Low_complexity Low_complexity 1 22 0 4 1006 608 259 50 28 chr13 55219736 55219915 -65064397 + B3A SINE B2 1 183 -15 4 1006 887 213 85 20 chr13 55220073 55220274 -65064038 - B3 SINE B2 -2 214 1 4 1006 497 293 18 43 chr13 55220304 55220468 -65063844 + RSINE1 SINE B4 3 162 -3 4 1006 623 162 341 24 chr13 55220534 55220698 -65063614 + B3 SINE B2 1 216 0 4 1006 723 161 146 0 chr13 55220746 55220876 -65063436 + B1_Mur4 SINE Alu 1 149 -1 4 1006 327 219 121 98 chr13 55220897 55221029 -65063283 + RSINE1 SINE B4 2 136 -29 4 1006 331 293 24 0 chr13 55221168 55221250 -65063062 + PB1D7 SINE Alu 1 84 -36 4 1006 562 256 24 0 chr13 55221416 55221541 -65062771 + B1F2 SINE Alu 1 128 -21 4 1006 749 181 14 0 chr13 55221660 55221798 -65062514 + B1_Mur3 SINE Alu 10 149 0 4 1006 245 181 55 14 chr13 55222257 55222330 -65061982 + T-rich Low_complexity Low_complexity 1 76 0 4 1006 1251 48 0 0 chr13 55222344 55222491 -65061821 + B1_Mus2 SINE Alu 1 147 0 4 1006 180 0 0 0 chr13 55222491 55222511 -65061801 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1006 698 234 28 39 chr13 55222511 55222523 -65061789 - B3A SINE B2 -21 177 166 4 1006 225 0 0 0 chr13 55222523 55222548 -65061764 + (GA)n Simple_repeat Simple_repeat 1 25 0 4 1006 468 0 0 0 chr13 55222548 55222599 -65061713 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1006 698 234 28 39 chr13 55222599 55222763 -65061549 - B3A SINE B2 -33 165 3 4 1006 255 340 90 28 chr13 55222879 55223024 -65061288 + MIRb SINE MIR 73 226 -42 4 1006 373 156 110 27 chr13 55223068 55223163 -65061149 + B1_Mur1 SINE Alu 2 145 -4 4 1006 310 263 26 0 chr13 55224012 55224088 -65060224 + PB1D10 SINE Alu 32 109 -8 4 1006 693 250 14 0 chr13 55224212 55224352 -65059960 + B1_Mur2 SINE Alu 1 142 -7 4 1006 181 0 33 33 chr13 55224353 55224383 -65059929 + (CAAAA)n Simple_repeat Simple_repeat 4 33 0 4 1006 219 290 57 14 chr13 55224437 55224507 -65059805 - ID4_ SINE ID -5 78 6 4 1006 207 0 0 0 chr13 55224610 55224633 -65059679 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1006 1117 80 98 0 chr13 55224635 55224798 -65059514 - B2_Mm2 SINE B2 -16 179 1 4 1006 450 228 118 10 chr13 55224873 55224975 -65059337 + B1_Mus2 SINE Alu 13 125 -22 4 1006 869 235 27 0 chr13 55224990 55225173 -65059139 - B3A SINE B2 -9 189 2 4 1006 1407 75 16 5 chr13 55225352 55225539 -65058773 + B2_Mm2 SINE B2 1 189 -6 4 1006 315 336 35 43 chr13 55225596 55225711 -65058601 + ID_B1 SINE B4 1 114 -110 4 1006 819 102 17 17 chr13 55225749 55225869 -65058443 + PB1D9 SINE Alu 1 120 0 4 1006 414 271 48 95 chr13 55226009 55226102 -65058210 - ID_B1 SINE B4 -1 223 126 4 1006 1205 69 115 0 chr13 55226102 55226276 -65058036 - B2_Mm2 SINE B2 -1 194 1 4 1006 414 271 48 95 chr13 55226276 55226329 -65057983 - ID_B1 SINE B4 -99 125 84 4 1006 326 246 120 23 chr13 55226960 55227093 -65057219 + B1F SINE Alu 3 148 -1 4 1006 265 196 196 0 chr13 55227141 55227253 -65057059 + L1M2 LINE L1 4352 4485 -1658 4 1006 780 270 92 22 chr13 55227255 55227528 -65056784 + B4A SINE B4 1 292 0 4 1006 306 159 158 74 chr13 55227567 55227662 -65056650 + B1F SINE Alu 46 148 -1 4 1006 813 68 246 0 chr13 55227733 55227851 -65056461 + B1_Mm SINE Alu 1 147 0 4 1006 227 347 95 7 chr13 55227864 55228012 -65056300 + L1M2 LINE L1 4546 4706 -1437 4 1006 228 268 28 99 chr13 55228012 55228153 -65056159 + MT2B LTR ERVL 131 261 -340 4 1006 511 260 31 8 chr13 55228044 55228172 -65056140 + ID_B1 SINE B4 76 206 -18 4 1006 232 286 18 0 chr13 55228185 55228241 -65056071 + ID_B1 SINE B4 101 157 -67 4 1006 1000 39 0 51 chr13 55228363 55228500 -65055812 - B1_Mm SINE Alu 0 147 18 4 1006 621 206 121 8 chr13 55228509 55228641 -65055671 - B1_Mur2 SINE Alu -2 147 1 4 1006 284 378 0 0 chr13 55229028 55229118 -65055194 + ID_B1 SINE B4 81 170 -54 4 1006 3131 141 239 71 chr13 55229617 55230359 -65053953 - RMER19B LTR ERVK -12 890 25 4 1006 416 312 0 43 chr13 55230426 55230543 -65053769 + PB1D9 SINE Alu 2 113 -7 4 1006 385 253 234 25 chr13 55230559 55230717 -65053595 + B3A SINE B2 5 195 -3 4 1006 1039 115 50 25 chr13 55230779 55230940 -65053372 + B2_Mm2 SINE B2 1 165 -30 4 1006 1474 70 0 5 chr13 55231204 55231391 -65052921 + B2_Mm2 SINE B2 1 186 -9 4 1006 400 281 138 16 chr13 55231520 55231643 -65052669 - RSINE1 SINE B4 -17 148 11 4 1006 227 234 0 0 chr13 55232257 55232304 -65052008 + ID_B1 SINE B4 176 222 -2 4 1006 247 371 22 0 chr13 55232344 55232433 -65051879 + PB1D10 SINE Alu 1 91 -26 4 1006 432 308 15 30 chr13 55232354 55232488 -65051824 + ID_B1 SINE B4 92 223 -1 4 1006 248 211 273 13 chr13 55232511 55232588 -65051724 + B1_Mur4 SINE Alu 3 99 -21 4 1006 284 220 0 17 chr13 55232612 55232672 -65051640 + ID_B1 SINE B4 124 182 -42 4 1006 282 250 27 14 chr13 55232672 55232685 -65051627 + PB1D10 SINE Alu 43 116 -1 4 1006 1207 41 0 27 chr13 55232688 55232838 -65051474 + B1_Mus1 SINE Alu 2 147 -1 4 1006 192 77 0 0 chr13 55232840 55232866 -65051446 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 4 1006 565 298 52 57 chr13 55232873 55233083 -65051229 + B4 SINE B4 84 292 0 4 1006 1434 80 37 0 chr13 55233207 55233394 -65050918 - B2_Mm2 SINE B2 0 195 2 4 1006 273 326 71 0 chr13 55233417 55233515 -65050797 + MIRb SINE MIR 95 199 -69 4 1006 191 318 76 0 chr13 55234977 55235043 -65049269 - L2 LINE L2 -601 2818 2748 4 1006 218 286 103 41 chr13 55235742 55235767 -65048545 - FAM SINE Alu -17 294 140 4 1006 415 299 16 33 chr13 55235767 55235888 -65048424 - ID_B1 SINE B4 -20 204 86 4 1006 366 281 78 52 chr13 55235898 55235931 -65048381 - L1ME3B LINE L1 -385 5855 5824 4 1006 722 154 100 0 chr13 55235931 55236061 -65048251 - B1_Mus2 SINE Alu -1 146 4 4 1006 366 281 78 52 chr13 55236061 55236181 -65048131 - L1ME3B LINE L1 -417 5823 5698 4 1006 395 200 29 18 chr13 55236431 55236525 -65047787 - PB1D9 SINE Alu -40 109 13 5 1006 297 279 41 41 chr13 55236472 55236569 -65047743 - B4 SINE B4 -142 150 54 5 1006 1906 98 25 14 chr13 55236980 55237258 -65047054 - Lx LINE L1 0 6654 6374 5 1006 338 309 85 0 chr13 55237483 55237577 -65046735 - RSINE1 SINE B4 -20 145 44 5 1006 1392 74 0 73 chr13 55237677 55237882 -65046430 - B2_Mm2 SINE B2 -5 190 1 5 1006 807 197 0 7 chr13 55238051 55238194 -65046118 - B1F SINE Alu 0 149 8 5 1006 505 273 12 67 chr13 55238194 55238214 -65046098 - ID_B1 SINE B4 0 222 69 5 1006 282 306 222 0 chr13 55238300 55238408 -65045904 + MLT1K LTR MaLR 314 445 -150 5 1006 384 22 0 0 chr13 55238416 55238461 -65045851 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1006 804 89 0 9 chr13 55238461 55238574 -65045738 - B1_Mus1 SINE Alu -32 116 5 5 1006 384 231 53 44 chr13 55238473 55238586 -65045726 - B4A SINE B4 -98 194 81 5 1006 374 232 7 150 chr13 55238474 55238621 -65045691 - MT2B LTR ERVL -344 257 132 5 1006 262 275 202 49 chr13 55238692 55238761 -65045551 + MLT1H2 LTR MaLR 219 281 -208 5 1006 270 200 93 67 chr13 55238761 55238836 -65045476 - ID2 SINE ID -5 78 2 5 1006 262 275 202 49 chr13 55238836 55238949 -65045363 + MLT1H2 LTR MaLR 282 431 -58 5 1006 1196 180 106 60 chr13 55238949 55239232 -65045080 - MTD LTR MaLR 0 419 124 5 1006 543 31 0 0 chr13 55239242 55239307 -65045005 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 5 1006 438 151 0 0 chr13 55239307 55239413 -65044899 + CT-rich Low_complexity Low_complexity 2 107 0 5 1006 733 203 0 50 chr13 55239413 55239553 -65044759 - B1_Mm SINE Alu -12 135 3 5 1006 1238 41 0 0 chr13 55239575 55239722 -65044590 - B1_Mus2 SINE Alu 0 147 1 5 1006 584 112 0 0 chr13 55239727 55239807 -65044505 - MTD LTR MaLR -341 80 1 5 1006 248 136 68 0 chr13 55240090 55240134 -65044178 - B1_Mur1 SINE Alu -10 139 93 5 1006 320 217 182 36 chr13 55240138 55240248 -65044064 - B1_Mur2 SINE Alu 0 150 24 5 1006 324 256 50 100 chr13 55240249 55240299 -65044013 - B1F2 SINE Alu -44 105 57 5 1006 1923 158 114 76 chr13 55240299 55240686 -65043626 - RMER4A LTR ERVK -3 463 50 5 1006 645 14 0 0 chr13 55240686 55240760 -65043552 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 1006 1923 158 114 76 chr13 55240760 55240818 -65043494 - RMER4A LTR ERVK -417 49 1 5 1006 324 256 50 100 chr13 55240818 55240867 -65043445 - B1F2 SINE Alu -93 56 11 5 1006 620 275 85 5 chr13 55241373 55241574 -65042738 + ID_B1 SINE B4 1 217 -7 5 1006 183 156 0 0 chr13 55241575 55241607 -65042705 + A-rich Low_complexity Low_complexity 1 32 0 5 1006 577 279 22 0 chr13 55241618 55241754 -65042558 + B1F1 SINE Alu 2 140 -9 5 1006 252 342 27 0 chr13 55241782 55241855 -65042457 + ID4_ SINE ID 5 79 -4 5 1006 1207 97 51 0 chr13 55242134 55242309 -65042003 + B2_Mm1t SINE B2 2 185 -8 5 1006 1192 70 0 0 chr13 55242328 55242484 -65041828 - MTB_Mm LTR MaLR -6 401 246 5 1006 255 61 0 0 chr13 55242501 55242534 -65041778 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1006 30 0 0 0 chr13 55242540 55242570 -65041742 + AT_rich Low_complexity Low_complexity 1 30 0 5 1006 222 37 0 0 chr13 55243072 55243099 -65041213 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 5 1006 351 272 146 7 chr13 55243112 55243249 -65041063 - HAL1-3A_ME LINE L1 -419 2439 2284 5 1006 323 233 21 85 chr13 55243261 55243355 -65040957 - B1F1 SINE Alu -59 90 3 5 1006 268 231 8 175 chr13 55243355 55243423 -65040889 - ID SINE ID -140 84 38 5 1006 1225 61 0 0 chr13 55243484 55243632 -65040680 + B1_Mus1 SINE Alu 1 148 0 5 1006 528 260 124 83 chr13 55243721 55243761 -65040551 + B3 SINE B2 15 57 -159 5 1006 1165 82 0 7 chr13 55243761 55243898 -65040414 + B1_Mm SINE Alu 1 137 -10 5 1006 208 0 62 0 chr13 55243898 55243930 -65040382 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5 1006 528 260 124 83 chr13 55243940 55244092 -65040220 + B3 SINE B2 58 215 -1 5 1006 262 382 50 11 chr13 55244099 55244273 -65040039 + MLT1F LTR MaLR 107 287 -261 5 1006 1105 236 90 77 chr13 55244273 55244722 -65039590 + MER31A LTR ERV1 1 457 -9 5 1006 240 175 0 0 chr13 55244751 55244791 -65039521 - ID_B1 SINE B4 -5 219 180 5 1006 405 198 39 68 chr13 55244803 55244906 -65039406 + ID_B1 SINE B4 125 224 0 5 1006 570 235 81 0 chr13 55245399 55245535 -65038777 + B1F SINE Alu 1 147 -2 5 1006 794 214 127 5 chr13 55245539 55245712 -65038600 + B3 SINE B2 4 189 -27 5 1006 6930 4 0 0 chr13 55245712 55246463 -65037849 + L1Md_A LINE L1 5832 6582 0 5 1006 395 256 118 97 chr13 55246463 55246475 -65037837 + B2_Mm2 SINE B2 181 192 -3 5 1006 1303 93 0 0 chr13 55246503 55246675 -65037637 + B2_Mm2 SINE B2 2 173 -22 5 1006 1524 53 16 0 chr13 55246677 55246866 -65037446 + B2_Mm2 SINE B2 2 193 -2 5 1006 264 91 0 0 chr13 55246894 55246938 -65037374 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 5 1006 692 219 0 64 chr13 55246953 55247109 -65037203 - B1_Mur2 SINE Alu -1 148 3 5 1006 297 0 0 0 chr13 55247127 55247160 -65037152 + (CATA)n Simple_repeat Simple_repeat 2 34 0 5 1006 529 242 7 70 chr13 55247169 55247311 -65037001 + RSINE1 SINE B4 9 141 -24 5 1006 23 33 0 0 chr13 55247325 55247355 -65036957 + AT_rich Low_complexity Low_complexity 1 30 0 5 1006 442 293 56 28 chr13 55247563 55247707 -65036605 - B1F2 SINE Alu 0 149 2 5 1006 697 110 252 65 chr13 55248026 55248162 -65036150 + B2_Mm2 SINE B2 1 166 -29 5 1006 907 157 75 43 chr13 55248162 55248348 -65035964 - B2_Mm2 SINE B2 -2 193 2 5 1006 697 110 252 65 chr13 55248348 55248366 -65035946 + B2_Mm2 SINE B2 167 184 -11 5 1006 1328 73 56 0 chr13 55248441 55248620 -65035692 + B2_Mm2 SINE B2 3 191 -4 5 1006 1156 96 6 6 chr13 55248622 55248800 -65035512 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 5 1006 736 114 9 0 chr13 55248800 55248914 -65035398 + BC1_Mm scRNA scRNA 1 115 -37 5 1006 537 273 64 14 chr13 55248921 55249062 -65035250 + B1_Mur1 SINE Alu 1 148 -1 5 1006 1076 181 0 2 chr13 55249139 55249570 -65034742 + (CA)n Simple_repeat Simple_repeat 1 429 0 5 1006 305 173 19 0 chr13 55249590 55249642 -65034670 - HAL1-3A_ME LINE L1 -840 2018 1966 5 1006 409 214 270 0 chr13 55249652 55249811 -65034501 - B3 SINE B2 -11 205 4 5 1006 547 259 27 47 chr13 55250663 55250813 -65033499 + B1F SINE Alu 1 147 -2 5 1006 507 33 0 0 chr13 55250814 55250875 -65033437 + (GGAA)n Simple_repeat Simple_repeat 4 64 0 5 1006 771 146 0 0 chr13 55250877 55251007 -65033305 + (GA)n Simple_repeat Simple_repeat 1 130 0 5 1006 1411 65 0 46 chr13 55251021 55251215 -65033097 + B2_Mm2 SINE B2 2 186 -9 5 1006 205 196 22 0 chr13 55251251 55251297 -65033015 + CT-rich Low_complexity Low_complexity 6 52 0 5 1006 297 0 0 0 chr13 55251519 55251552 -65032760 + (ACTG)n Simple_repeat Simple_repeat 4 36 0 5 1006 195 129 0 0 chr13 55251988 55252019 -65032293 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1006 479 256 57 28 chr13 55252022 55252163 -65032149 + B3 SINE B2 71 215 -1 5 1006 1182 43 14 0 chr13 55252298 55252439 -65031873 - B1_Mm SINE Alu 0 147 5 5 1006 281 268 0 53 chr13 55252703 55252778 -65031534 - L2c LINE L2 -28 3359 3289 5 1006 201 273 187 33 chr13 55252778 55252792 -65031520 - MIRm SINE MIR -24 250 148 5 1006 1156 66 20 0 chr13 55253232 55253384 -65030928 - B2_Mm2 SINE B2 -7 188 34 5 1006 1211 75 0 0 chr13 55253385 55253532 -65030780 + B1_Mus1 SINE Alu 2 148 0 5 1006 270 81 0 0 chr13 55253651 55253688 -65030624 + (TC)n Simple_repeat Simple_repeat 1 37 0 5 1006 787 93 0 0 chr13 55253699 55253807 -65030505 - B1_Mus1 SINE Alu -6 142 35 5 1006 293 259 107 107 chr13 55253807 55253868 -65030444 - B4 SINE B4 -64 210 52 5 1006 404 246 25 50 chr13 55255141 55255261 -65029051 + B1F SINE Alu 33 149 0 5 1006 340 256 49 0 chr13 55255550 55255632 -65028680 + U6 snRNA snRNA 2 87 -20 5 1006 323 226 20 62 chr13 55256087 55256186 -65028126 + ID4_ SINE ID 4 98 -54 5 1006 320 0 25 0 chr13 55257354 55257394 -65026918 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1006 825 146 36 22 chr13 55258544 55258718 -65025594 - B3A SINE B2 -7 188 2 5 1006 599 191 0 52 chr13 55258733 55258849 -65025463 - B1_Mur2 SINE Alu -21 128 19 5 1006 258 236 0 0 chr13 55258879 55259002 -65025310 + (TA)n Simple_repeat Simple_repeat 1 123 0 5 1006 470 229 45 108 chr13 55259002 55259047 -65025265 + MT2B LTR ERVL 118 152 -449 5 1006 934 61 0 0 chr13 55259047 55259162 -65025150 + B1_Mus1 SINE Alu 2 116 -32 5 1006 270 0 0 0 chr13 55259165 55259195 -65025117 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 1006 489 34 0 0 chr13 55259204 55259263 -65025049 + (TA)n Simple_repeat Simple_repeat 1 59 0 5 1006 883 71 150 0 chr13 55259263 55259390 -65024922 - B2_Mm2 SINE B2 -49 146 1 5 1006 631 236 35 28 chr13 55259667 55259811 -65024501 - B1F2 SINE Alu -2 147 3 5 1006 260 62 0 0 chr13 55259819 55259851 -65024461 + (CCA)n Simple_repeat Simple_repeat 1 32 0 5 1006 849 180 0 0 chr13 55259851 55260018 -65024294 + CT-rich Low_complexity Low_complexity 1 167 0 5 1006 1127 211 5 19 chr13 55260069 55260281 -65024031 - B3 SINE B2 -6 210 2 5 1006 1450 78 11 0 chr13 55260829 55261020 -65023292 + B2_Mm1t SINE B2 1 193 0 5 1006 378 129 164 18 chr13 55261986 55262098 -65022214 - B2_Mm2 SINE B2 -2 191 47 5 1006 1298 95 6 16 chr13 55262149 55262331 -65021981 - B2_Mm2 SINE B2 -14 181 2 5 1006 225 0 0 0 chr13 55263581 55263606 -65020706 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 5 1006 483 268 24 24 chr13 55263606 55263618 -65020694 - B1F SINE Alu 0 149 139 6 1006 569 98 284 35 chr13 55263618 55263734 -65020578 - B1_Mus2 SINE Alu 0 147 3 6 1006 483 268 24 24 chr13 55263734 55263847 -65020465 - B1F SINE Alu -11 138 24 6 1006 836 207 120 82 chr13 55264057 55264210 -65020102 + B3A SINE B2 2 151 -47 6 1006 390 42 0 0 chr13 55264210 55264258 -65020054 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1006 594 0 0 0 chr13 55264258 55264324 -65019988 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 1006 555 207 120 82 chr13 55264324 55264353 -65019959 + B2_Mm2 SINE B2 145 191 -4 6 1006 240 286 174 11 chr13 55264365 55264457 -65019855 + PB1D10 SINE Alu 1 107 -10 6 1006 253 286 0 0 chr13 55264471 55264527 -65019785 + ID4 SINE ID 14 69 -14 6 1006 639 197 43 0 chr13 55264653 55264770 -65019542 - B1_Mur1 SINE Alu -8 141 20 6 1006 280 230 45 107 chr13 55264680 55264792 -65019520 - MT2B LTR ERVL -337 264 160 6 1006 266 300 14 28 chr13 55264780 55264852 -65019460 - RSINE1 SINE B4 0 165 95 6 1006 393 255 7 12 chr13 55265508 55265921 -65018391 + (TATATG)n Simple_repeat Simple_repeat 1 411 0 6 1006 969 274 35 45 chr13 55265924 55266214 -65018098 - B4A SINE B4 0 292 6 6 1006 631 146 19 0 chr13 55266221 55266324 -65017988 + B1_Mur3 SINE Alu 39 143 -6 6 1006 207 0 0 0 chr13 55266326 55266349 -65017963 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1006 1249 41 7 0 chr13 55266466 55266613 -65017699 - B1_Mus1 SINE Alu 0 148 1 6 1006 1284 34 0 0 chr13 55266630 55266777 -65017535 - B1_Mus2 SINE Alu 0 147 1 6 1006 360 0 0 0 chr13 55266899 55266939 -65017373 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1006 213 235 338 0 chr13 55266978 55267046 -65017266 - B1_Mus1 SINE Alu -57 91 1 6 1006 583 233 38 15 chr13 55267046 55267121 -65017191 - ID SINE ID -145 79 2 6 1006 1283 20 7 0 chr13 55267958 55268104 -65016208 - B1_Mm SINE Alu 0 147 1 6 1006 23 33 0 0 chr13 55270072 55270102 -65014210 + AT_rich Low_complexity Low_complexity 1 30 0 6 1006 226 316 63 49 chr13 55270721 55270864 -65013448 + MLT2F LTR ERVL 287 431 -232 6 1006 701 262 86 10 chr13 55270930 55271127 -65013185 + B3 SINE B2 5 216 0 6 1006 252 100 0 0 chr13 55271138 55271178 -65013134 + (TAGA)n Simple_repeat Simple_repeat 4 43 0 6 1006 1408 87 19 0 chr13 55271221 55271427 -65012885 + L1_Mus3 LINE L1 6424 6633 -5 6 1006 1167 75 0 0 chr13 55271435 55271581 -65012731 - B1_Mm SINE Alu 0 147 2 6 1006 214 329 39 52 chr13 55271894 55271971 -65012341 + PB1 SINE Alu 9 84 -43 6 1006 837 242 16 11 chr13 55271973 55272161 -65012151 + B3A SINE B2 2 190 -8 6 1006 294 238 23 45 chr13 55272376 55272464 -65011848 + PB1D7 SINE Alu 35 120 0 6 1006 489 286 13 13 chr13 55272464 55272613 -65011699 + B1F SINE Alu 1 149 0 6 1006 477 265 87 14 chr13 55272632 55272770 -65011542 + B1F2 SINE Alu 2 149 0 6 1006 190 267 0 48 chr13 55273554 55273617 -65010695 - MIRb SINE MIR -90 178 119 6 1006 182 284 98 49 chr13 55273586 55273708 -65010604 - MIRm SINE MIR -127 149 22 6 1006 489 260 102 68 chr13 55273831 55274037 -65010275 + ID_B1 SINE B4 1 213 -11 6 1006 480 326 42 26 chr13 55274123 55274315 -65009997 + ID_B1 SINE B4 4 198 -26 6 1006 180 0 0 0 chr13 55274332 55274352 -65009960 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 6 1006 1101 51 72 0 chr13 55274524 55274662 -65009650 - B1_Mus1 SINE Alu 0 148 1 6 1006 626 252 8 0 chr13 55274722 55274849 -65009463 - RSINE1 SINE B4 -31 134 7 6 1006 236 218 21 161 chr13 55274774 55274867 -65009445 - B3A SINE B2 -118 80 1 6 1006 402 74 0 0 chr13 55274874 55274928 -65009384 + (T)n Simple_repeat Simple_repeat 1 54 0 6 1006 1124 64 43 0 chr13 55274928 55275069 -65009243 - B1_Mm SINE Alu 0 147 1 6 1006 257 278 137 14 chr13 55275090 55275163 -65009149 - MER5A DNA MER1_type -1 188 107 6 1006 540 214 315 10 chr13 55275246 55275449 -65008863 + B4A SINE B4 16 280 -12 6 1006 255 31 0 0 chr13 55275464 55275496 -65008816 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1006 21 71 0 0 chr13 55276472 55276514 -65007798 + AT_rich Low_complexity Low_complexity 1 42 0 6 1006 1258 111 26 10 chr13 55276866 55277058 -65007254 + B2_Mm2 SINE B2 1 195 0 6 1006 1275 41 0 0 chr13 55277070 55277216 -65007096 + B1_Mus2 SINE Alu 2 147 0 6 1006 255 57 0 0 chr13 55277216 55277243 -65007069 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1006 1088 90 14 0 chr13 55277243 55277388 -65006924 + B1_Mus2 SINE Alu 1 147 0 6 1006 255 57 0 0 chr13 55277388 55277395 -65006917 + (A)n Simple_repeat Simple_repeat 1 7 0 6 1006 893 199 70 25 chr13 55277438 55277639 -65006673 - URR1A DNA MER1_type -16 210 1 6 1006 521 179 136 16 chr13 55277675 55277800 -65006512 + B1_Mur2 SINE Alu 10 149 0 6 1006 472 198 17 0 chr13 55277963 55278054 -65006258 + ID_B1 SINE B4 1 96 -196 6 1006 698 159 186 0 chr13 55278090 55278235 -65006077 - B2_Mm2 SINE B2 -14 181 10 6 1006 264 182 49 49 chr13 55278299 55278366 -65005946 + PB1D10 SINE Alu 37 106 -11 6 1006 408 351 26 13 chr13 55278366 55278522 -65005790 + RSINE1 SINE B4 4 161 -4 6 1006 264 182 49 49 chr13 55278522 55278535 -65005777 + PB1D10 SINE Alu 107 117 0 6 1006 237 65 0 0 chr13 55278540 55278571 -65005741 + (TAA)n Simple_repeat Simple_repeat 1 31 0 6 1006 553 214 0 32 chr13 55278605 55278733 -65005579 + B1F SINE Alu 7 120 0 6 1006 212 327 122 71 chr13 55278809 55279217 -65005095 - L2b LINE L2 -9 3366 2938 6 1006 243 0 0 0 chr13 55279350 55279377 -65004935 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1006 937 116 68 68 chr13 55279381 55279557 -65004755 - B2_Mm2 SINE B2 -19 176 1 6 1006 514 156 30 40 chr13 55279680 55279780 -65004532 + B1_Mur1 SINE Alu 21 119 -30 6 1006 486 49 0 0 chr13 55279918 55279979 -65004333 + (GAAA)n Simple_repeat Simple_repeat 3 63 0 6 1006 326 200 240 19 chr13 55280264 55280422 -65003890 - B3A SINE B2 0 216 5 6 1006 234 220 34 0 chr13 55280645 55280657 -65003655 - L2a LINE L2 -328 3098 3085 6 1006 2264 99 115 8 chr13 55280657 55281013 -65003299 + ORR1B1 LTR MaLR 1 394 0 6 1006 234 220 34 0 chr13 55281013 55281059 -65003253 - L2a LINE L2 -342 3084 3039 6 1006 279 79 0 0 chr13 55281430 55281468 -65002844 + (TCC)n Simple_repeat Simple_repeat 2 39 0 6 1006 1100 93 0 7 chr13 55281471 55281622 -65002690 - B2_Mm2 SINE B2 -19 176 27 6 1006 600 224 180 12 chr13 55281949 55282121 -65002191 - MTEa LTR MaLR -13 366 166 6 1006 269 192 39 0 chr13 55282173 55282225 -65002087 + RMER15 LTR ERVL 1 54 -521 6 1006 468 0 0 0 chr13 55282233 55282285 -65002027 + (GTTTG)n Simple_repeat Simple_repeat 2 53 0 6 1006 879 26 0 87 chr13 55282285 55282404 -65001908 - B1_Mm SINE Alu -8 139 29 6 1006 334 77 39 0 chr13 55282393 55282445 -65001867 + B1_Mus2 SINE Alu 94 147 0 6 1006 216 0 0 0 chr13 55282445 55282469 -65001843 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1006 457 36 0 0 chr13 55282469 55282524 -65001788 + ORR1A3 LTR MaLR 272 326 0 6 1006 237 94 0 0 chr13 55282524 55282554 -65001758 + RMER15 LTR ERVL 546 575 0 6 1006 222 37 0 0 chr13 55282814 55282841 -65001471 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 6 1006 574 148 62 47 chr13 55282842 55282970 -65001342 - B1_Mur3 SINE Alu 0 149 20 6 1006 244 185 28 156 chr13 55282873 55282982 -65001330 - MT2B LTR ERVL -337 264 170 6 1006 1615 31 5 0 chr13 55282985 55283176 -65001136 - B2_Mm1t SINE B2 0 193 2 6 1006 479 291 7 72 chr13 55283182 55283262 -65001050 - ID_B1 SINE B4 -3 221 143 6 1006 355 252 78 0 chr13 55283262 55283365 -65000947 - PB1D9 SINE Alu -9 111 1 6 1006 479 291 7 72 chr13 55283365 55283436 -65000876 - ID_B1 SINE B4 -82 142 80 6 1006 360 0 0 0 chr13 55283461 55283501 -65000811 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 6 1006 661 165 130 0 chr13 55284245 55284360 -64999952 + B3 SINE B2 1 130 -86 6 1006 180 125 0 0 chr13 55284364 55284396 -64999916 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1006 25 0 0 0 chr13 55284430 55284455 -64999857 + AT_rich Low_complexity Low_complexity 1 25 0 6 1006 558 287 2 3 chr13 55284458 55284596 -64999716 + RSINE1 SINE B4 1 136 -29 6 1006 1228 34 0 13 chr13 55284649 55284798 -64999514 - B1_Mus2 SINE Alu 0 147 1 6 1006 315 320 78 0 chr13 55285138 55285241 -64999071 + RMER12 LTR ERVK 746 856 -466 6 1006 271 312 0 138 chr13 55285246 55285362 -64998950 - RMER12 LTR ERVK -467 855 758 6 1006 1114 91 94 28 chr13 55285362 55285542 -64998770 - URR1A DNA MER1_type 0 226 35 6 1006 4376 40 62 17 chr13 55285807 55286385 -64997927 + RLTR6_Mm LTR ERV1 1 604 -50 6 1006 31972 29 9 4 chr13 55286385 55290043 -64994269 + MMVL30-int LTR ERV1 21 3698 0 6 1006 4269 35 65 18 chr13 55290043 55290601 -64993711 + RLTR6_Mm LTR ERV1 1 584 -70 6 1006 978 65 0 48 chr13 55290593 55290738 -64993574 - B2_Mm2 SINE B2 -57 138 1 6 1006 234 286 0 0 chr13 55290872 55290942 -64993370 - ID4 SINE ID -13 70 1 6 1006 268 23 68 0 chr13 55292448 55292492 -64991820 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 6 1006 239 322 53 17 chr13 55292583 55292703 -64991609 + MIRm SINE MIR 44 170 -106 6 1006 455 238 124 0 chr13 55292705 55292810 -64991502 + RSINE1 SINE B4 12 129 -36 6 1006 225 0 0 0 chr13 55292875 55292900 -64991412 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 1006 948 63 79 0 chr13 55292900 55293026 -64991286 - B1_Mus2 SINE Alu -10 137 2 6 1006 894 73 3 1 chr13 55293100 55293237 -64991075 + B1_Mur4 SINE Alu 2 141 -9 6 1006 189 0 0 0 chr13 55293388 55293409 -64990903 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1006 1259 41 0 0 chr13 55293409 55293556 -64990756 - B1_Mus2 SINE Alu 0 147 1 7 1006 457 319 2 82 chr13 55293622 55293835 -64990477 - B4A SINE B4 -2 290 96 7 1006 438 139 256 50 chr13 55293898 55294019 -64990293 - B1_Mur4 SINE Alu 0 150 5 7 1006 417 296 58 94 chr13 55294156 55294205 -64990107 + RSINE1 SINE B4 3 50 -115 7 1006 1284 194 97 113 chr13 55294205 55294595 -64989717 - ORR1C2 LTR MaLR 0 384 1 7 1006 417 296 58 94 chr13 55294595 55294683 -64989629 + RSINE1 SINE B4 51 135 -30 7 1006 464 0 18 0 chr13 55294701 55294757 -64989555 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 1006 1246 54 0 0 chr13 55294800 55294947 -64989365 + B1_Mm SINE Alu 1 147 0 7 1006 1392 173 54 40 chr13 55294963 55295366 -64988946 - RMER17C LTR ERVK -518 440 16 7 1006 608 303 85 30 chr13 55295368 55295698 -64988614 + RMER15-int LTR ERVL 1625 1972 -3027 7 1006 232 368 67 39 chr13 55295791 55295969 -64988343 - RMER15 LTR ERVL -15 560 378 7 1006 474 248 27 18 chr13 55296118 55296229 -64988083 - PB1D9 SINE Alu -7 113 2 7 1006 935 50 141 0 chr13 55296596 55296717 -64987595 + B1_Mm SINE Alu 1 138 -9 7 1006 741 79 0 0 chr13 55296722 55296823 -64987489 + (GAAAA)n Simple_repeat Simple_repeat 2 102 0 7 1006 693 124 204 0 chr13 55296828 55296941 -64987371 + B1_Mur3 SINE Alu 2 137 -12 7 1006 666 0 0 0 chr13 55296941 55297015 -64987297 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 7 1006 433 210 0 139 chr13 55297015 55297159 -64987153 + MT2B LTR ERVL 152 275 -326 7 1006 932 122 14 0 chr13 55297039 55297178 -64987134 + B1_Mur2 SINE Alu 9 149 0 7 1006 438 318 77 0 chr13 55297207 55297402 -64986910 - B3 SINE B2 -6 210 1 7 1006 2125 135 104 61 chr13 55297535 55297689 -64986623 - RMER6B LTR ERVK 0 461 292 7 1006 1382 85 21 0 chr13 55297689 55297877 -64986435 + B2_Mm2 SINE B2 2 193 -2 7 1006 2125 135 104 61 chr13 55297877 55297952 -64986360 - RMER6B LTR ERVK -170 291 222 7 1006 1277 34 0 0 chr13 55297952 55298099 -64986213 - B1_Mm SINE Alu 0 147 1 7 1006 2125 135 104 61 chr13 55298099 55298310 -64986002 - RMER6B LTR ERVK -240 221 1 7 1006 331 255 135 19 chr13 55298346 55298450 -64985862 + MT2A LTR ERVL 1 116 -417 7 1006 1119 75 0 7 chr13 55298452 55298600 -64985712 + B1_Mus1 SINE Alu 2 148 0 7 1006 303 286 0 32 chr13 55298604 55298633 -64985679 + L1MEf LINE L1 1999 2027 -4173 7 1006 1477 57 5 20 chr13 55298633 55298829 -64985483 + B2_Mm1a SINE B2 1 193 0 7 1006 303 286 0 32 chr13 55298829 55298893 -64985419 + L1MEf LINE L1 2028 2089 -4111 7 1006 818 251 63 125 chr13 55298901 55299300 -64985012 + MT2B LTR ERVL 57 601 0 7 1006 1645 245 50 3 chr13 55299414 55299798 -64984514 - MTB_Mm LTR MaLR 0 407 6 7 1006 347 320 31 78 chr13 55299799 55299895 -64984417 + RMER15-int LTR ERVL 4522 4613 -386 7 1006 397 283 26 9 chr13 55299895 55300009 -64984303 - PB1D9 SINE Alu -2 118 3 7 1006 347 320 31 78 chr13 55300009 55300105 -64984207 + RMER15-int LTR ERVL 4614 4705 -294 7 1006 597 28 0 0 chr13 55300170 55300241 -64984071 + (TTTC)n Simple_repeat Simple_repeat 4 74 0 7 1006 485 96 22 0 chr13 55300249 55300330 -64983982 - B1_Mus2 SINE Alu 0 147 28 7 1006 814 54 26 9 chr13 55300472 55300585 -64983727 + B1_Mus1 SINE Alu 34 148 0 7 1006 22 0 0 0 chr13 55300585 55300607 -64983705 + AT_rich Low_complexity Low_complexity 1 22 0 7 1006 348 24 0 0 chr13 55300660 55300701 -64983611 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1006 316 222 0 0 chr13 55300707 55300761 -64983551 - ID4 SINE ID -19 64 11 7 1006 362 243 40 10 chr13 55300798 55300896 -64983416 - PB1D10 SINE Alu -2 125 13 7 1006 371 304 0 0 chr13 55301087 55301199 -64983113 + PB1D7 SINE Alu 3 114 -6 7 1006 469 250 25 17 chr13 55301228 55301346 -64982966 + B1F2 SINE Alu 30 148 -1 7 1006 710 150 0 15 chr13 55301346 55301481 -64982831 + GA-rich Low_complexity Low_complexity 1 133 0 7 1006 277 214 18 0 chr13 55301499 55301555 -64982757 + PB1D10 SINE Alu 21 77 -40 7 1006 341 281 18 31 chr13 55301596 55301714 -64982598 + PB1D10 SINE Alu 1 124 -3 7 1006 270 0 0 0 chr13 55301753 55301783 -64982529 + (GA)n Simple_repeat Simple_repeat 1 30 0 7 1006 604 233 7 46 chr13 55301851 55302004 -64982308 - B1_Mur1 SINE Alu 0 149 3 7 1006 216 0 0 0 chr13 55302009 55302033 -64982279 + (TTA)n Simple_repeat Simple_repeat 1 24 0 7 1006 787 135 88 22 chr13 55302034 55302170 -64982142 - B1_Mur3 SINE Alu -1 148 4 7 1006 240 246 0 60 chr13 55302072 55302189 -64982123 - ORR1B1-int LTR MaLR -762 747 638 7 1006 281 207 168 76 chr13 55302265 55302396 -64981916 + B1F2 SINE Alu 7 149 0 7 1006 245 143 21 115 chr13 55302396 55302528 -64981784 + L1M LINE L1 5352 5456 -706 7 1006 609 281 37 60 chr13 55302695 55302911 -64981401 + B3 SINE B2 1 211 -5 7 1006 219 114 0 0 chr13 55302997 55303032 -64981280 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1006 660 190 80 7 chr13 55303032 55303170 -64981142 + B1_Mus1 SINE Alu 1 148 0 7 1006 1116 110 98 0 chr13 55303174 55303338 -64980974 + B2_Mm2 SINE B2 2 181 -14 7 1006 257 255 55 165 chr13 55303497 55303571 -64980741 + B4A SINE B4 29 141 -151 7 1006 286 208 0 0 chr13 55303571 55303624 -64980688 + B1F SINE Alu 4 56 -93 7 1006 250 274 16 0 chr13 55303672 55303734 -64980578 + G-rich Low_complexity Low_complexity 1 63 0 7 1006 796 186 0 7 chr13 55303812 55303958 -64980354 - B1_Mur2 SINE Alu 0 149 5 7 1006 430 248 24 89 chr13 55303979 55304085 -64980227 - PB1D7 SINE Alu 0 120 18 7 1006 749 143 143 0 chr13 55304085 55304211 -64980101 + B1_Mur4 SINE Alu 1 144 -6 7 1006 430 248 24 89 chr13 55304211 55304228 -64980084 - PB1D7 SINE Alu -103 17 5 7 1006 376 200 0 0 chr13 55304212 55304282 -64980030 + B3 SINE B2 61 130 -86 7 1006 1439 57 17 0 chr13 55304346 55304523 -64979789 + B2_Mm2 SINE B2 2 181 -14 7 1006 357 24 0 0 chr13 55304619 55304661 -64979651 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 7 1006 326 344 49 79 chr13 55304677 55304841 -64979471 - B4 SINE B4 -129 163 5 7 1006 252 0 0 0 chr13 55304845 55304873 -64979439 + (TC)n Simple_repeat Simple_repeat 1 28 0 7 1006 256 295 0 37 chr13 55304874 55304955 -64979357 - B4A SINE B4 -1 291 214 7 1006 323 326 21 21 chr13 55304968 55305062 -64979250 + B1_Mur3 SINE Alu 2 95 -54 7 1006 220 189 0 0 chr13 55305426 55305463 -64978849 + B1F2 SINE Alu 34 70 -79 7 1006 1173 54 14 0 chr13 55305755 55305902 -64978410 - B1_Mur4 SINE Alu -1 149 1 7 1006 269 257 14 0 chr13 55305903 55305977 -64978335 - B1_Mur3 SINE Alu -1 148 74 7 1006 207 0 0 0 chr13 55305985 55306008 -64978304 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1006 744 69 0 10 chr13 55306008 55306101 -64978211 - B1_Mm SINE Alu -9 138 46 7 1006 207 0 0 0 chr13 55306101 55306124 -64978188 + (C)n Simple_repeat Simple_repeat 1 23 0 7 1006 305 308 28 1 chr13 55306141 55306222 -64978090 - B1_Mus1 SINE Alu -65 83 1 7 1006 295 321 28 156 chr13 55306222 55306440 -64977872 - B4A SINE B4 -64 228 39 7 1006 447 245 0 10 chr13 55306476 55306579 -64977733 + L1MB7 LINE L1 5911 6012 -172 7 1006 1323 166 156 6 chr13 55306575 55306903 -64977409 - Lx9 LINE L1 -10 7634 7258 7 1006 867 164 0 27 chr13 55306903 55307053 -64977259 - B1_Mus1 SINE Alu -2 146 1 7 1006 236 54 54 0 chr13 55307134 55307171 -64977141 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 7 1006 1122 70 28 0 chr13 55307171 55307314 -64976998 - B1_Mus2 SINE Alu 0 147 1 7 1006 1509 45 0 16 chr13 55307566 55307748 -64976564 + B2_Mm1t SINE B2 1 179 -14 7 1006 312 134 379 0 chr13 55307776 55307879 -64976433 + B2_Mm2 SINE B2 47 188 -7 7 1006 325 286 13 0 chr13 55308018 55308095 -64976217 - ID_B1 SINE B4 -52 172 95 7 1006 218 375 25 0 chr13 55309670 55309750 -64974562 + MIR SINE MIR 180 261 -1 7 1006 26 0 0 0 chr13 55311628 55311654 -64972658 + GC_rich Low_complexity Low_complexity 1 26 0 7 1007 281 264 22 0 chr13 55312963 55313054 -64971258 + G-rich Low_complexity Low_complexity 6 98 0 7 1007 28 0 0 0 chr13 55313116 55313144 -64971168 + GC_rich Low_complexity Low_complexity 1 28 0 7 1007 228 67 0 0 chr13 55313396 55313426 -64970886 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 7 1007 24 0 0 0 chr13 55313711 55313735 -64970577 + GC_rich Low_complexity Low_complexity 1 24 0 7 1007 228 111 0 0 chr13 55314122 55314158 -64970154 + (GGA)n Simple_repeat Simple_repeat 1 36 0 7 1007 263 278 45 27 chr13 55316915 55317026 -64967286 + PB1D7 SINE Alu 1 113 -7 7 1007 454 250 26 11 chr13 55317288 55317397 -64966915 + B1F SINE Alu 1 119 -1 7 1007 360 215 0 0 chr13 55317454 55317519 -64966793 - RSINE1 SINE B4 -77 88 24 7 1007 755 184 50 0 chr13 55317591 55317732 -64966580 - B1_Mur4 SINE Alu -2 148 1 7 1007 257 208 264 0 chr13 55317766 55317838 -64966474 - ID_B1 SINE B4 -54 170 80 7 1007 1021 102 113 6 chr13 55317981 55318149 -64966163 - B2_Mm2 SINE B2 -7 188 3 7 1007 207 0 0 0 chr13 55318158 55318181 -64966131 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1007 707 103 0 0 chr13 55318181 55318278 -64966034 - B1_Mus2 SINE Alu -10 137 41 7 1007 183 100 0 0 chr13 55318333 55318363 -64965949 + (T)n Simple_repeat Simple_repeat 1 30 0 7 1007 989 57 0 0 chr13 55318365 55318487 -64965825 - B1_Mus2 SINE Alu 0 147 26 7 1007 381 272 65 0 chr13 55318531 55318623 -64965689 + B1F1 SINE Alu 1 98 -51 7 1007 234 339 33 57 chr13 55318533 55318655 -64965657 + MT2B LTR ERVL 167 285 -316 7 1007 1241 113 11 0 chr13 55318665 55318842 -64965470 + B2_Mm1t SINE B2 1 179 -14 8 1007 366 175 232 40 chr13 55318874 55318979 -64965333 + B2_Mm2 SINE B2 47 177 -18 8 1007 186 43 0 0 chr13 55318979 55319002 -64965310 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 8 1007 366 175 232 40 chr13 55319002 55319021 -64965291 + B2_Mm2 SINE B2 178 195 0 8 1007 24 32 0 0 chr13 55319038 55319069 -64965243 + AT_rich Low_complexity Low_complexity 1 31 0 8 1007 438 167 122 0 chr13 55319069 55319159 -64965153 + B1_Mur1 SINE Alu 43 143 -6 8 1007 977 208 44 19 chr13 55319247 55319453 -64964859 + B3 SINE B2 1 211 -5 8 1007 259 244 135 34 chr13 55319511 55319600 -64964712 + PB1D10 SINE Alu 7 104 -45 8 1007 255 61 0 0 chr13 55319618 55319651 -64964661 + (TC)n Simple_repeat Simple_repeat 1 33 0 8 1007 346 273 91 0 chr13 55319790 55319889 -64964423 - RSINE1 SINE B4 -7 158 51 8 1007 456 67 0 0 chr13 55319890 55319950 -64964362 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 1007 362 283 22 0 chr13 55319962 55320054 -64964258 - RSINE1 SINE B4 0 165 72 8 1007 336 319 26 12 chr13 55320059 55320193 -64964119 - B4 SINE B4 -150 142 10 8 1007 189 0 0 0 chr13 55320203 55320224 -64964088 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 8 1007 638 205 29 57 chr13 55320243 55320383 -64963929 - B1_Mus1 SINE Alu -9 139 4 8 1007 292 351 57 50 chr13 55320741 55320882 -64963430 - ID_B1 SINE B4 -71 153 12 8 1007 371 233 7 13 chr13 55320919 55321013 -64963299 - PB1D10 SINE Alu -8 112 17 8 1007 851 147 7 27 chr13 55321043 55321190 -64963122 - B1_Mus1 SINE Alu 0 148 5 8 1007 507 276 30 52 chr13 55321225 55321359 -64962953 - ID_B1 SINE B4 -9 215 85 8 1007 486 215 73 15 chr13 55321370 55321507 -64962805 - B1_Mur2 SINE Alu -4 145 1 8 1007 511 259 60 8 chr13 55321677 55321794 -64962518 + RSINE1 SINE B4 3 125 -40 8 1007 378 0 0 0 chr13 55321795 55321837 -64962475 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1007 207 0 0 0 chr13 55321866 55321889 -64962423 + (CA)n Simple_repeat Simple_repeat 2 24 0 8 1007 252 59 0 0 chr13 55321889 55321923 -64962389 + (GA)n Simple_repeat Simple_repeat 1 34 0 8 1007 719 212 36 0 chr13 55321931 55322068 -64962244 - B1_Mur3 SINE Alu -7 142 1 8 1007 276 130 0 0 chr13 55322101 55322147 -64962165 + (TCC)n Simple_repeat Simple_repeat 2 47 0 8 1007 942 144 0 16 chr13 55322148 55322331 -64961981 + CT-rich Low_complexity Low_complexity 1 180 0 8 1007 451 301 60 33 chr13 55322336 55322518 -64961794 - ID_B1 SINE B4 -31 193 7 8 1007 446 235 8 32 chr13 55322873 55322996 -64961316 + PB1D9 SINE Alu 1 120 0 8 1007 1726 21 0 0 chr13 55323252 55323445 -64960867 + B2_Mm1a SINE B2 1 193 0 8 1007 1310 77 71 11 chr13 55323561 55323745 -64960567 - B2_Mm2 SINE B2 0 195 1 8 1007 22 56 0 0 chr13 55323747 55323783 -64960529 + AT_rich Low_complexity Low_complexity 1 36 0 8 1007 371 294 132 18 chr13 55323850 55323959 -64960353 - PB1D10 SINE Alu -2 125 1 8 1007 544 269 172 18 chr13 55324313 55324476 -64959836 + B3 SINE B2 1 188 -28 8 1007 23 0 0 0 chr13 55324476 55324499 -64959813 + AT_rich Low_complexity Low_complexity 1 23 0 8 1007 552 246 90 0 chr13 55324510 55324632 -64959680 - B1_Mur1 SINE Alu -7 142 10 8 1007 406 72 0 55 chr13 55325056 55325129 -64959183 + (TCCC)n Simple_repeat Simple_repeat 1 69 0 8 1007 204 40 0 0 chr13 55325143 55325168 -64959144 + (CA)n Simple_repeat Simple_repeat 2 26 0 8 1007 481 320 39 0 chr13 55325275 55325428 -64958884 - RSINE1 SINE B4 -2 163 5 8 1007 330 263 50 45 chr13 55325804 55325910 -64958402 - PB1D10 SINE Alu -37 112 4 8 1007 332 338 20 52 chr13 55325946 55326099 -64958213 + ID_B1 SINE B4 20 167 -57 8 1007 240 272 117 21 chr13 55326019 55326113 -64958199 + PB1D9 SINE Alu 11 113 -7 8 1007 881 163 57 0 chr13 55326355 55326496 -64957816 + B1_Mur4 SINE Alu 2 150 0 8 1007 22 35 0 0 chr13 55326607 55326636 -64957676 + AT_rich Low_complexity Low_complexity 1 29 0 8 1007 722 156 59 0 chr13 55326636 55326771 -64957541 - B1_Mus2 SINE Alu 0 147 5 8 1007 259 204 0 20 chr13 55326727 55326777 -64957535 - B4A SINE B4 -159 133 85 8 1007 1064 76 21 0 chr13 55327063 55327207 -64957105 + B1_Mus1 SINE Alu 2 148 0 8 1007 213 239 0 0 chr13 55327311 55327357 -64956955 - PB1D10 SINE Alu -2 115 70 8 1007 198 0 0 0 chr13 55327357 55327379 -64956933 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1007 1260 27 0 0 chr13 55327380 55327527 -64956785 - B1_Mus2 SINE Alu 0 147 1 8 1007 894 191 137 5 chr13 55327795 55327985 -64956327 + B3 SINE B2 1 215 -1 8 1007 189 0 0 0 chr13 55328149 55328170 -64956142 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 8 1007 246 287 287 0 chr13 55328264 55328365 -64955947 + ID_B1 SINE B4 87 216 -8 8 1007 387 0 0 0 chr13 55328486 55328529 -64955783 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1007 833 249 75 10 chr13 55328573 55328772 -64955540 - B3 SINE B2 -4 212 1 8 1007 266 280 45 27 chr13 55328803 55328913 -64955399 - L1MC LINE L1 -2095 5787 5676 8 1007 252 318 34 22 chr13 55328951 55329040 -64955272 + PB1D10 SINE Alu 3 92 -28 8 1007 473 241 9 53 chr13 55329120 55329234 -64955078 - PB1D10 SINE Alu 0 117 9 8 1007 887 232 91 0 chr13 55329263 55329461 -64954851 - B3 SINE B2 0 216 1 8 1007 480 235 17 42 chr13 55329481 55329601 -64954711 - PB1D10 SINE Alu 0 117 1 8 1007 793 238 12 0 chr13 55329601 55329679 -64954633 - ID SINE ID -143 81 2 8 1007 578 171 4 8 chr13 55329816 55329928 -64954384 - B1_Mus2 SINE Alu -9 111 2 8 1007 357 267 0 0 chr13 55329862 55329937 -64954375 - B4A SINE B4 -140 152 78 8 1007 255 306 14 27 chr13 55329965 55330039 -64954273 - B3 SINE B2 -42 174 102 8 1007 592 262 16 0 chr13 55330207 55330333 -64953979 - B3 SINE B2 -86 130 3 8 1007 380 363 55 0 chr13 55330356 55330502 -64953810 - RSINE1 SINE B4 -5 160 7 8 1007 189 0 0 0 chr13 55330514 55330535 -64953777 + (T)n Simple_repeat Simple_repeat 1 21 0 8 1007 544 304 48 67 chr13 55330668 55330876 -64953436 + ID_B1 SINE B4 2 205 -19 8 1007 301 282 14 0 chr13 55331190 55331261 -64953051 - ID4 SINE ID -9 74 3 8 1007 383 315 63 0 chr13 55331277 55331388 -64952924 - B1F SINE Alu -20 129 12 8 1007 326 333 70 23 chr13 55331388 55331406 -64952906 - ID_B1 SINE B4 -20 204 70 8 1007 244 269 0 0 chr13 55331493 55331545 -64952767 - RSINE1 SINE B4 -98 67 16 8 1007 31 26 0 0 chr13 55331606 55331644 -64952668 + AT_rich Low_complexity Low_complexity 1 38 0 8 1007 303 270 219 0 chr13 55331698 55331807 -64952505 - B1F1 SINE Alu -17 130 1 8 1007 352 238 49 8 chr13 55331866 55331989 -64952323 - L1M4 LINE L1 -383 5801 5674 8 1007 396 216 26 22 chr13 55331990 55332108 -64952204 - B1_Mm SINE Alu -20 127 9 8 1007 251 262 0 130 chr13 55332042 55332134 -64952178 - MT2B LTR ERVL -370 231 152 8 1007 1325 72 50 0 chr13 55332152 55332332 -64951980 - B2_Mm2 SINE B2 -4 191 3 8 1007 622 218 44 29 chr13 55332887 55333024 -64951288 - B1_Mur4 SINE Alu -9 141 3 8 1007 330 205 43 43 chr13 55333135 55333227 -64951085 - ID_B1 SINE B4 -6 218 127 8 1007 576 228 115 11 chr13 55333466 55333591 -64950721 - B3 SINE B2 -5 211 71 8 1007 459 0 0 0 chr13 55333591 55333642 -64950670 + (TG)n Simple_repeat Simple_repeat 2 52 0 8 1007 576 228 115 11 chr13 55333642 55333707 -64950605 - B3 SINE B2 -146 70 1 8 1007 1494 54 0 11 chr13 55333806 55333992 -64950320 - B2_Mm1a SINE B2 -8 185 2 8 1007 673 229 28 21 chr13 55334511 55334654 -64949658 - B1_Mur2 SINE Alu 0 149 6 8 1007 303 306 67 109 chr13 55334654 55334675 -64949637 - B4 SINE B4 -66 225 69 8 1007 195 42 0 0 chr13 55334774 55334798 -64949514 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1007 923 153 22 43 chr13 55334823 55335007 -64949305 + B2_Mm2 SINE B2 5 184 -11 8 1007 335 161 18 0 chr13 55335088 55335144 -64949168 - RSINE1 SINE B4 -105 60 4 8 1007 327 111 76 8 chr13 55335687 55335784 -64948528 - B2_Mm2 SINE B2 -9 186 46 8 1007 1092 153 11 0 chr13 55335802 55335978 -64948334 - B2_Mm1t SINE B2 -14 179 2 8 1007 833 142 7 28 chr13 55335999 55336144 -64948168 + B1_Mus1 SINE Alu 5 146 -2 8 1007 1371 76 11 0 chr13 55336149 55336334 -64947978 + B2_Mm1a SINE B2 2 188 -5 8 1007 438 267 175 6 chr13 55336443 55336620 -64947692 - ID_B1 SINE B4 -7 217 11 8 1007 1011 131 64 21 chr13 55336660 55336847 -64947465 + B2_Mm2 SINE B2 1 195 0 8 1007 381 304 118 7 chr13 55336869 55337005 -64947307 + RSINE1 SINE B4 5 155 -10 8 1007 250 267 40 100 chr13 55337147 55337174 -64947138 + B1F1 SINE Alu 15 43 -106 8 1007 1012 203 13 71 chr13 55337174 55337304 -64947008 - URR1B DNA MER1_type 0 225 93 8 1007 1529 48 21 0 chr13 55337304 55337492 -64946820 + B2_Mm1t SINE B2 2 193 0 8 1007 1012 203 13 71 chr13 55337492 55337600 -64946712 - URR1B DNA MER1_type -133 92 1 8 1007 250 267 40 100 chr13 55337600 55337672 -64946640 + B1F1 SINE Alu 44 108 -41 8 1007 324 308 19 9 chr13 55337603 55337708 -64946604 + ID_B1 SINE B4 119 224 0 8 1007 1087 82 0 14 chr13 55337884 55338032 -64946280 - B1_Mm SINE Alu 0 147 2 8 1007 1286 95 26 26 chr13 55338229 55338423 -64945889 + B2_Mm2 SINE B2 1 194 -1 8 1007 286 218 104 31 chr13 55338446 55338584 -64945728 + B4 SINE B4 1 151 -141 8 1007 273 276 44 79 chr13 55338548 55338662 -64945650 - B3A SINE B2 -82 116 7 8 1007 298 281 49 0 chr13 55338665 55338747 -64945565 - ID_B1 SINE B4 -7 217 132 9 1007 291 172 68 17 chr13 55338724 55338783 -64945529 - B3A SINE B2 -130 68 7 9 1007 422 267 22 0 chr13 55338786 55338876 -64945436 - ID_B1 SINE B4 -7 217 126 9 1007 229 245 0 70 chr13 55338826 55338883 -64945429 - PB1D10 SINE Alu -23 94 42 9 1007 613 202 66 18 chr13 55338919 55339053 -64945259 - B1_Mur1 SINE Alu 0 149 14 9 1007 369 246 130 41 chr13 55339059 55339182 -64945130 - B1F SINE Alu -1 148 15 9 1007 473 309 40 0 chr13 55339137 55339263 -64945049 - B3A SINE B2 -67 131 1 9 1007 1334 75 16 21 chr13 55339281 55339472 -64944840 + B2_Mm2 SINE B2 1 190 -5 9 1007 1168 50 0 0 chr13 55339484 55339623 -64944689 + B1_Mus1 SINE Alu 5 143 -5 9 1007 727 272 19 0 chr13 55339644 55339806 -64944506 - B3A SINE B2 -30 168 4 9 1007 289 259 0 129 chr13 55339873 55339966 -64944346 - RSINE1 SINE B4 -71 94 14 9 1007 876 149 50 0 chr13 55340508 55340649 -64943663 - B1_Mur4 SINE Alu 0 150 3 9 1007 1500 62 0 5 chr13 55340663 55340856 -64943456 - B2_Mm2 SINE B2 -3 192 1 9 1007 250 271 0 33 chr13 55340897 55340958 -64943354 + BC1_Mm scRNA scRNA 2 60 -92 9 1007 884 45 0 0 chr13 55340972 55341084 -64943228 - B1_Mus1 SINE Alu 0 148 37 9 1007 302 339 8 17 chr13 55341162 55341279 -64943033 - PB1D10 SINE Alu -1 116 1 9 1007 271 272 95 19 chr13 55341402 55341507 -64942805 - PB1D7 SINE Alu -1 119 7 9 1007 472 218 88 29 chr13 55341589 55341726 -64942586 - B1_Mur2 SINE Alu 0 149 5 9 1007 255 318 35 131 chr13 55341598 55341797 -64942515 - B4 SINE B4 -73 219 40 9 1007 501 240 20 0 chr13 55341763 55341863 -64942449 - ID_B1 SINE B4 -64 160 59 9 1007 1112 82 0 7 chr13 55341886 55342034 -64942278 - B1_Mus2 SINE Alu 0 147 1 9 1007 245 188 0 0 chr13 55342128 55342176 -64942136 - PB1D10 SINE Alu -1 116 69 9 1007 323 243 14 0 chr13 55342273 55342343 -64941969 - ID4_ SINE ID -11 72 2 9 1007 1492 62 5 0 chr13 55342423 55342615 -64941697 - B2_Mm1t SINE B2 0 193 1 9 1007 288 306 184 0 chr13 55342676 55342774 -64941538 - PB1 SINE Alu 0 127 12 9 1007 1463 206 54 92 chr13 55342774 55343197 -64941115 - MTB_Mm LTR MaLR 0 407 1 9 1007 537 146 58 0 chr13 55343199 55343302 -64941010 - MTB_Mm-int LTR MaLR -2 1256 1148 9 1007 4058 187 114 24 chr13 55343294 55344227 -64940085 - MTB_Mm-int LTR MaLR -239 1019 3 9 1007 243 88 0 0 chr13 55344244 55344278 -64940034 + (T)n Simple_repeat Simple_repeat 1 34 0 9 1007 2696 98 13 18 chr13 55344278 55344673 -64939639 - MTB_Mm LTR MaLR -14 393 1 9 1007 1301 92 27 0 chr13 55345904 55346088 -64938224 - B2_Mm1t SINE B2 -3 190 2 9 1007 704 221 43 0 chr13 55346202 55346342 -64937970 - B1_Mus2 SINE Alu 0 147 2 9 1007 601 213 56 49 chr13 55346605 55346748 -64937564 + B1_Mur2 SINE Alu 6 149 0 9 1007 238 300 14 14 chr13 55349636 55349707 -64934605 - ID4_ SINE ID 0 83 13 9 1007 401 212 40 0 chr13 55350180 55350279 -64934033 - L1M3 LINE L1 -1157 4983 4881 9 1007 274 269 0 29 chr13 55350279 55350348 -64933964 - B1F SINE Alu -82 67 1 9 1007 443 176 0 0 chr13 55350470 55350544 -64933768 - B3A SINE B2 -85 113 40 9 1007 1184 118 37 5 chr13 55350566 55350753 -64933559 - B2_Mm1t SINE B2 0 193 1 9 1007 223 130 176 68 chr13 55350789 55350863 -64933449 - B1_Mur3 SINE Alu -1 148 67 9 1007 240 203 51 0 chr13 55350923 55350982 -64933330 - L1M3 LINE L1 -2711 3429 3368 9 1007 234 143 0 0 chr13 55351039 55351057 -64933255 + (T)n Simple_repeat Simple_repeat 1 18 0 9 1007 1190 62 0 0 chr13 55351057 55351203 -64933109 - B1_Mm SINE Alu 0 147 2 9 1007 234 143 0 0 chr13 55351203 55351226 -64933086 + (T)n Simple_repeat Simple_repeat 1 23 0 9 1007 647 277 13 13 chr13 55351259 55351409 -64932903 + B3A SINE B2 10 159 -39 9 1007 378 0 0 0 chr13 55351409 55351451 -64932861 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 1007 674 104 95 8 chr13 55351500 55351626 -64932686 + Lx9 LINE L1 7503 7639 -5 9 1007 257 140 132 55 chr13 55351755 55351846 -64932466 - L1M3 LINE L1 -2939 3201 3104 9 1007 315 0 0 0 chr13 55352024 55352059 -64932253 + (CA)n Simple_repeat Simple_repeat 2 36 0 9 1007 228 35 0 0 chr13 55352212 55352241 -64932071 + (T)n Simple_repeat Simple_repeat 1 29 0 9 1007 1143 56 7 0 chr13 55352241 55352384 -64931928 - B1_Mus1 SINE Alu 0 148 5 9 1007 362 294 80 14 chr13 55352393 55352669 -64931643 - L1M3 LINE L1 -3197 2949 2656 9 1007 228 182 0 64 chr13 55352830 55352877 -64931435 - RSINE1 SINE B4 -117 48 5 9 1007 307 280 142 16 chr13 55352889 55353016 -64931296 - B1F SINE Alu -6 143 1 9 1007 275 276 8 72 chr13 55353019 55353144 -64931168 - ID_B1 SINE B4 -8 216 100 9 1007 200 204 0 0 chr13 55353223 55353267 -64931045 + T-rich Low_complexity Low_complexity 6 49 0 9 1007 1296 81 27 5 chr13 55353433 55353619 -64930693 - B2_Mm2 SINE B2 -3 192 3 9 1007 1257 21 0 7 chr13 55353648 55353794 -64930518 - B1_Mus2 SINE Alu 0 147 3 9 1007 368 246 270 26 chr13 55353805 55354035 -64930277 - L1M4 LINE L1 -967 5179 4894 9 1007 259 345 45 11 chr13 55354044 55354132 -64930180 + B1F SINE Alu 7 97 -52 9 1007 475 354 120 21 chr13 55354224 55354458 -64929854 - B4A SINE B4 -35 257 1 9 1007 252 0 0 0 chr13 55354493 55354521 -64929791 + (T)n Simple_repeat Simple_repeat 1 28 0 9 1007 5463 30 0 0 chr13 55354831 55355467 -64928845 - L1Md_T LINE L1 0 6582 5947 9 1007 1539 39 15 0 chr13 55355467 55355671 -64928641 + L1_Mm LINE L1 4096 4302 -1581 9 1007 327 243 146 0 chr13 55355931 55356034 -64928278 - L1M4 LINE L1 -1409 4737 4620 9 1007 1365 72 22 0 chr13 55356145 55356326 -64927986 + B2_Mm2 SINE B2 2 186 -9 9 1007 306 352 121 30 chr13 55356396 55356528 -64927784 - RSINE1 SINE B4 -2 163 20 9 1007 323 313 216 7 chr13 55356508 55356656 -64927656 - B3 SINE B2 -35 181 3 9 1007 279 329 105 64 chr13 55356794 55356999 -64927313 - MTEb LTR MaLR -67 312 85 9 1007 189 0 0 0 chr13 55357096 55357117 -64927195 + (T)n Simple_repeat Simple_repeat 1 21 0 9 1007 1230 54 0 0 chr13 55357117 55357265 -64927047 - B1_Mus1 SINE Alu 0 148 1 9 1007 256 234 125 31 chr13 55357449 55357577 -64926735 - L1M4 LINE L1 -2379 3767 3628 9 1007 332 22 22 0 chr13 55357676 55357721 -64926591 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 9 1007 324 324 63 49 chr13 55357723 55357866 -64926446 - ID_B1 SINE B4 -2 222 78 9 1007 687 150 44 0 chr13 55358429 55358542 -64925770 + B1_Mur4 SINE Alu 33 150 0 9 1007 438 305 106 5 chr13 55358693 55358891 -64925421 - ID_B1 SINE B4 -4 220 3 9 1007 1046 108 19 0 chr13 55359324 55359482 -64924830 - B2_Mm2 SINE B2 -6 189 29 9 1007 1208 102 11 11 chr13 55359626 55359804 -64924508 - B2_Mm1t SINE B2 -14 179 2 9 1007 674 181 15 8 chr13 55360132 55360266 -64924046 + B2_Mm2 SINE B2 47 181 -14 9 1007 406 285 81 41 chr13 55360427 55360599 -64923713 + MIRb SINE MIR 20 198 -70 9 1007 207 0 0 0 chr13 55360976 55360999 -64923313 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1007 1192 61 0 0 chr13 55361003 55361150 -64923162 - B1_Mus2 SINE Alu 0 147 1 9 1007 1082 116 0 0 chr13 55361344 55361491 -64922821 - B1_Mus1 SINE Alu 0 148 2 9 1007 1641 16 0 35 chr13 55362078 55362278 -64922034 + B2_Mm1a SINE B2 1 193 0 9 1007 700 130 0 0 chr13 55362537 55362637 -64921675 + B2_Mm2 SINE B2 2 101 -94 9 1007 277 307 30 0 chr13 55362637 55362738 -64921574 - L1MB3 LINE L1 -53 6130 6027 9 1007 240 194 0 88 chr13 55362771 55362839 -64921473 - L1MB3 LINE L1 -311 5872 5811 9 1007 192 125 0 0 chr13 55362839 55362871 -64921441 + (TTG)n Simple_repeat Simple_repeat 2 33 0 9 1007 244 333 23 23 chr13 55363640 55363726 -64920586 + B4 SINE B4 169 254 -38 9 1007 471 275 52 22 chr13 55363731 55363865 -64920447 - RSINE1 SINE B4 -25 140 3 9 1007 528 296 0 14 chr13 55363997 55364144 -64920168 - B1_Mur3 SINE Alu 0 149 5 9 1007 180 0 0 0 chr13 55364152 55364172 -64920140 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9 1007 225 246 12 148 chr13 55364177 55364258 -64920054 - PB1 SINE Alu -41 86 17 9 1007 21 71 0 0 chr13 55364318 55364360 -64919952 + AT_rich Low_complexity Low_complexity 1 42 0 9 1007 1393 276 132 28 chr13 55364899 55365492 -64918820 + Tigger7 DNA MER2_type 2 657 -1834 9 1007 1545 124 144 3 chr13 55365492 55365783 -64918529 + RMER4A LTR ERVK 1 332 -134 9 1007 776 274 108 22 chr13 55365801 55366125 -64918187 + Tigger7 DNA MER2_type 659 1010 -1481 9 1007 265 179 84 116 chr13 55366131 55366226 -64918086 + Tigger7 DNA MER2_type 2237 2328 -163 9 1007 333 0 0 0 chr13 55366515 55366552 -64917760 + (T)n Simple_repeat Simple_repeat 1 37 0 9 1007 329 306 119 12 chr13 55366552 55366803 -64917509 - Lx7 LINE L1 -391 7305 7028 9 1007 629 263 0 7 chr13 55366800 55366938 -64917374 - Lx7 LINE L1 -975 6721 6585 9 1007 317 293 48 48 chr13 55367142 55367289 -64917023 - B1F1 SINE Alu -2 147 1 9 1007 1104 75 0 14 chr13 55367447 55367595 -64916717 + B1_Mus2 SINE Alu 2 147 0 9 1007 1242 94 22 11 chr13 55367743 55367925 -64916387 + B2_Mm2 SINE B2 2 185 -10 9 1007 21 36 0 0 chr13 55367940 55367968 -64916344 + AT_rich Low_complexity Low_complexity 1 28 0 9 1007 317 340 32 0 chr13 55368017 55368111 -64916201 + RSINE1 SINE B4 59 155 -10 9 1007 395 55 327 18 chr13 55368248 55368358 -64915954 - B2_Mm2 SINE B2 0 195 52 9 1007 1209 35 7 0 chr13 55368376 55368521 -64915791 - B1_Mm SINE Alu -1 146 1 9 1007 25 0 0 0 chr13 55368620 55368645 -64915667 + AT_rich Low_complexity Low_complexity 1 25 0 9 1007 355 352 9 0 chr13 55368736 55368841 -64915471 - PB1D10 SINE Alu -9 108 3 9 1007 248 250 0 117 chr13 55368852 55368863 -64915449 - tRNA-Ala-GCY_ tRNA tRNA -2 73 6 9 1007 270 238 0 45 chr13 55368863 55368929 -64915383 - ID4 SINE ID -9 74 12 9 1007 390 207 24 0 chr13 55369486 55369568 -64914744 - ID_B1 SINE B4 -10 214 131 9 1007 1654 282 104 33 chr13 55370501 55371325 -64912987 - Lx8 LINE L1 -174 7299 6417 1 1007 277 275 14 28 chr13 55371337 55371408 -64912904 - B1_Mur1 SINE Alu -2 147 78 1 1007 516 217 60 28 chr13 55371457 55371602 -64912710 - B1_Mur4 SINE Alu 0 150 1 1 1007 285 331 65 77 chr13 55371602 55371621 -64912691 - B4 SINE B4 -60 199 65 1 1007 526 273 31 0 chr13 55371942 55372070 -64912242 + B1_Mur1 SINE Alu 1 132 -17 1 1007 222 318 16 0 chr13 55372120 55372183 -64912129 + ID4 SINE ID 9 72 -11 1 1007 433 291 54 47 chr13 55372406 55372422 -64911890 + ID_B1 SINE B4 76 223 0 1 1007 670 209 84 15 chr13 55372422 55372553 -64911759 + B1_Mur2 SINE Alu 10 149 0 1 1007 487 236 55 0 chr13 55372737 55372847 -64911465 - PB1D9 SINE Alu -4 116 1 1 1007 292 325 0 25 chr13 55373003 55373082 -64911230 + RSINE1 SINE B4 1 77 -88 1 1007 1204 61 0 0 chr13 55373535 55373683 -64910629 + B1_Mus1 SINE Alu 1 148 0 1 1007 22 0 0 0 chr13 55373687 55373709 -64910603 + AT_rich Low_complexity Low_complexity 1 22 0 1 1007 304 395 8 50 chr13 55373842 55373962 -64910350 + B1F1 SINE Alu 1 115 -34 1 1007 279 265 110 127 chr13 55374250 55374423 -64909889 + B3 SINE B2 2 171 -45 1 1007 725 217 29 0 chr13 55374407 55374545 -64909767 + B1_Mur1 SINE Alu 7 148 -1 1 1007 194 297 132 0 chr13 55375108 55375199 -64909113 + MIRm SINE MIR 168 270 -6 1 1007 802 93 17 8 chr13 55375482 55375601 -64908711 - PB1D9 SINE Alu 0 120 1 1 1007 206 171 40 54 chr13 55375601 55375638 -64908674 + T-rich Low_complexity Low_complexity 29 68 0 1 1007 1182 61 0 0 chr13 55375638 55375785 -64908527 - B1_Mm SINE Alu 0 147 1 1 1007 1339 67 62 0 chr13 55375794 55375812 -64908500 - B2_Mm1a SINE B2 -3 190 162 1 1007 315 0 0 0 chr13 55375812 55375847 -64908465 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 1 1007 1339 67 62 0 chr13 55375847 55376007 -64908305 - B2_Mm1a SINE B2 -32 161 2 1 1007 206 171 40 54 chr13 55376007 55376023 -64908289 + T-rich Low_complexity Low_complexity 7 20 0 1 1007 480 161 85 11 chr13 55376171 55376265 -64908047 - B4 SINE B4 -191 101 1 1 1007 395 236 218 0 chr13 55376448 55376558 -64907754 - B1_Mus2 SINE Alu -7 140 7 1 1007 287 305 40 59 chr13 55376470 55376571 -64907741 - B4 SINE B4 -113 179 81 1 1007 387 347 0 8 chr13 55376569 55376691 -64907621 - ID_B1 SINE B4 0 224 104 1 1007 268 364 41 20 chr13 55376691 55376713 -64907599 - B1F2 SINE Alu 0 147 1 1 1007 246 152 0 0 chr13 55377014 55377073 -64907239 + T-rich Low_complexity Low_complexity 1 59 0 1 1007 629 89 25 0 chr13 55377073 55377179 -64907133 - B1_Mus2 SINE Alu 0 120 1 1 1007 658 297 0 35 chr13 55377260 55377431 -64906881 + B3 SINE B2 5 169 -47 1 1007 282 252 120 46 chr13 55377618 55377726 -64906586 + PB1D7 SINE Alu 5 120 0 1 1007 22 0 0 0 chr13 55377758 55377780 -64906532 + AT_rich Low_complexity Low_complexity 1 22 0 1 1007 198 0 0 0 chr13 55379347 55379369 -64904943 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 1 1007 383 231 65 11 chr13 55379374 55379466 -64904846 - PB1D10 SINE Alu -7 110 14 1 1007 319 293 117 29 chr13 55379568 55379705 -64904607 - MIR SINE MIR -66 196 48 1 1007 496 309 103 58 chr13 55379816 55380077 -64904235 - B4A SINE B4 -13 279 7 1 1007 1051 79 79 0 chr13 55380157 55380309 -64904003 - B2_Mm2 SINE B2 -31 164 1 1 1007 451 257 38 0 chr13 55380314 55380419 -64903893 - B1_Mur1 SINE Alu 0 149 41 1 1007 710 197 13 20 chr13 55380556 55380706 -64903606 + B1_Mur2 SINE Alu 1 149 0 1 1007 505 278 20 53 chr13 55380818 55380970 -64903342 + B1_Mur1 SINE Alu 2 148 -1 1 1007 374 267 58 0 chr13 55380971 55381057 -64903255 + ID_B1 SINE B4 79 169 -55 1 1007 239 94 0 0 chr13 55381352 55381384 -64902928 + B1_Mus2 SINE Alu 1 32 -115 1 1007 327 242 37 112 chr13 55381603 55381710 -64902602 - B1_Mm SINE Alu -11 136 38 1 1007 395 317 76 100 chr13 55381929 55382139 -64902173 - B4 SINE B4 0 292 88 1 1007 568 318 114 9 chr13 55382127 55382346 -64901966 - B4 SINE B4 -50 242 1 1 1007 462 275 92 36 chr13 55382347 55382543 -64901769 + MER2 DNA MER2_type 106 312 -33 1 1007 204 0 26 53 chr13 55382797 55382835 -64901477 + (TTTTTG)n Simple_repeat Simple_repeat 2 38 0 1 1007 210 357 53 23 chr13 55382911 55383043 -64901269 + L2 LINE L2 2752 2887 -532 1 1007 1050 268 114 64 chr13 55383270 55383629 -64900683 + MTE2b LTR MaLR 1 377 -2 1 1007 234 0 0 0 chr13 55383786 55383812 -64900500 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 1 1007 623 134 240 16 chr13 55383812 55383922 -64900390 - B1_Mus1 SINE Alu -9 139 1 1 1007 388 323 60 0 chr13 55384440 55384573 -64899739 + B1F SINE Alu 5 145 -4 1 1007 478 220 40 10 chr13 55385117 55385218 -64899094 + RSINE1 SINE B4 2 105 -60 1 1007 24 53 0 0 chr13 55385409 55385447 -64898865 + AT_rich Low_complexity Low_complexity 1 38 0 1 1007 291 337 11 0 chr13 55385537 55385632 -64898680 - B1F SINE Alu -50 99 4 1 1007 651 156 138 15 chr13 55385759 55385889 -64898423 - B1_Mm SINE Alu 0 147 2 1 1007 754 127 17 0 chr13 55385998 55386116 -64898196 + PB1D9 SINE Alu 1 120 0 1 1007 341 281 37 45 chr13 55386132 55386266 -64898046 - B2_Mm1t SINE B2 -59 134 2 1 1007 277 308 61 71 chr13 55386311 55386409 -64897903 + RSINE1 SINE B4 8 104 -61 1 1007 283 226 128 23 chr13 55386446 55386532 -64897780 + MT2B LTR ERVL 169 263 -338 1 1007 693 175 18 0 chr13 55386457 55386571 -64897741 + B1_Mur1 SINE Alu 33 148 -1 1 1007 1518 62 0 0 chr13 55386575 55386768 -64897544 + B2_Mm1t SINE B2 1 193 0 1 1007 286 224 48 126 chr13 55386837 55387004 -64897308 - L1M5 LINE L1 -302 5877 5724 1 1007 796 204 10 45 chr13 55387005 55387205 -64897107 - B2_Mm2 SINE B2 -2 193 1 1 1007 247 377 130 8 chr13 55387539 55387576 -64896736 - B1F SINE Alu -2 147 1 1 1007 402 322 0 11 chr13 55387576 55387670 -64896642 - ID_B1 SINE B4 -50 174 82 1 1007 246 324 68 63 chr13 55387712 55387903 -64896409 - B2_Mm1a SINE B2 -1 192 1 1 1007 371 314 69 11 chr13 55387920 55388195 -64896117 - L1MA6 LINE L1 -4 6287 5996 1 1007 25 51 0 0 chr13 55388244 55388283 -64896029 + AT_rich Low_complexity Low_complexity 1 39 0 1 1007 252 193 138 17 chr13 55388330 55388388 -64895924 - B4 SINE B4 -214 78 14 1 1007 484 231 51 0 chr13 55388656 55388773 -64895539 - B1_Mur1 SINE Alu -10 139 17 1 1007 216 226 77 46 chr13 55389064 55389129 -64895183 + B1_Mus1 SINE Alu 5 71 -77 1 1007 541 290 52 50 chr13 55389184 55389461 -64894851 + MTE2a LTR MaLR 57 379 0 1 1007 549 214 103 0 chr13 55389534 55389651 -64894661 - B1_Mus2 SINE Alu 0 147 19 1 1007 219 308 103 71 chr13 55389539 55389665 -64894647 - B4A SINE B4 -73 219 90 1 1007 198 0 0 0 chr13 55389701 55389723 -64894589 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1007 1037 56 0 107 chr13 55389723 55389882 -64894430 + B1_Mm SINE Alu 1 142 -5 1 1007 440 225 0 43 chr13 55389892 55389985 -64894327 - B1_Mus1 SINE Alu -55 93 5 1 1007 233 297 8 139 chr13 55389985 55390020 -64894292 - MT2B2 LTR ERVL -336 247 137 1 1007 394 273 50 180 chr13 55390024 55390097 -64894215 + ID_B1 SINE B4 78 143 -81 1 1007 1737 21 0 0 chr13 55390097 55390290 -64894022 + B2_Mm1a SINE B2 1 193 0 1 1007 394 273 50 180 chr13 55390290 55390315 -64893997 + ID_B1 SINE B4 144 150 -74 1 1007 702 145 166 57 chr13 55390315 55390490 -64893822 - B2_Mm2 SINE B2 0 195 2 1 1007 394 273 50 180 chr13 55390490 55390551 -64893761 + ID_B1 SINE B4 151 217 -7 1 1007 233 276 51 8 chr13 55390686 55390803 -64893509 - L1MC5 LINE L1 -482 7479 7358 1 1007 939 115 100 13 chr13 55390818 55390968 -64893344 + B2_Mm2 SINE B2 2 164 -31 1 1007 267 345 67 22 chr13 55390993 55391082 -64893230 - RSINE1 SINE B4 -11 154 62 1 1007 22 0 0 0 chr13 55391622 55391644 -64892668 + AT_rich Low_complexity Low_complexity 1 22 0 1 1007 495 0 0 0 chr13 55392124 55392179 -64892133 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 1007 1148 69 0 0 chr13 55392180 55392324 -64891988 - B1_Mus1 SINE Alu -4 144 1 1 1007 333 246 29 0 chr13 55392753 55392822 -64891490 - RSINE1 SINE B4 -51 114 44 1 1007 491 299 141 21 chr13 55392842 55393033 -64891279 - B4A SINE B4 -78 214 1 1 1007 324 0 0 0 chr13 55393049 55393085 -64891227 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 1 1007 1219 43 0 0 chr13 55393089 55393230 -64891082 - B1_Mm SINE Alu -6 141 1 1 1007 245 222 0 0 chr13 55393252 55393297 -64891015 + ID4_ SINE ID 1 45 -38 1 1007 574 300 71 31 chr13 55393302 55393498 -64890814 - B3 SINE B2 -5 211 8 1 1007 723 207 30 0 chr13 55393531 55393666 -64890646 - B1_Mur3 SINE Alu -8 141 3 1 1007 858 273 73 16 chr13 55394180 55394426 -64889886 + B4A SINE B4 26 285 -7 1 1007 1128 90 0 0 chr13 55394552 55394697 -64889615 - B1_Mus1 SINE Alu 0 148 4 1 1007 2115 48 0 0 chr13 55395410 55395662 -64888650 + L1_Mus1 LINE L1 6314 6565 -2 1 1007 300 245 38 55 chr13 55395708 55395804 -64888508 - PB1D9 SINE Alu -1 146 50 1 1007 448 259 8 8 chr13 55395873 55395990 -64888322 + PB1D10 SINE Alu 1 117 0 1 1007 556 217 79 7 chr13 55396101 55396240 -64888072 - B1F2 SINE Alu 0 149 1 1 1007 295 53 35 35 chr13 55396362 55396420 -64887892 + (TTTTTG)n Simple_repeat Simple_repeat 2 59 0 1 1007 1196 42 7 0 chr13 55396424 55396566 -64887746 - B1_Mus1 SINE Alu -5 143 1 1 1007 360 244 103 58 chr13 55396589 55396763 -64887549 - B3A SINE B2 -14 184 3 1 1007 368 340 33 73 chr13 55396935 55397236 -64887076 + B4A SINE B4 4 292 0 1 1007 557 274 44 0 chr13 55397651 55397786 -64886526 + B1F SINE Alu 9 149 0 1 1007 357 358 67 7 chr13 55397798 55397947 -64886365 + ID_B1 SINE B4 10 167 -57 1 1007 351 349 0 28 chr13 55397870 55397979 -64886333 + PB1D10 SINE Alu 10 115 -2 1 1007 492 191 32 123 chr13 55397986 55398141 -64886171 + B1_Mur1 SINE Alu 4 144 -5 1 1007 239 0 0 0 chr13 55398736 55398767 -64885545 - B1_Mm SINE Alu 0 147 117 1 1007 1206 111 28 0 chr13 55399615 55399795 -64884517 + B2_Mm1a SINE B2 2 186 -7 1 1007 681 83 269 0 chr13 55400153 55400261 -64884051 + B1_Mus2 SINE Alu 1 137 -10 1 1007 329 54 32 97 chr13 55400646 55400708 -64883604 + B2_Mm1t SINE B2 122 179 -14 1 1007 339 139 0 39 chr13 55400721 55400788 -64883524 + B2_Mm2 SINE B2 47 109 -107 1 1007 232 269 15 67 chr13 55400807 55400840 -64883472 - B4A SINE B4 -71 153 100 1 1007 234 171 0 0 chr13 55400840 55400875 -64883437 - PB1D9 SINE Alu -85 35 1 1 1007 223 86 16 79 chr13 55401354 55401383 -64882929 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1007 1171 68 7 0 chr13 55401383 55401529 -64882783 - B1_Mm SINE Alu 0 147 1 1 1007 223 86 16 79 chr13 55401529 55401549 -64882763 + (TTTG)n Simple_repeat Simple_repeat 4 21 0 1 1007 1477 73 0 0 chr13 55401549 55401741 -64882571 - B2_Mm1t SINE B2 0 193 2 1 1007 223 86 16 79 chr13 55401741 55401753 -64882559 + (TTTG)n Simple_repeat Simple_repeat 3 15 0 1 1007 1038 73 72 83 chr13 55401779 55401959 -64882353 + B2_Mm1t SINE B2 2 179 -14 1 1007 339 139 0 39 chr13 55401972 55402039 -64882273 + B2_Mm2 SINE B2 47 109 -107 1 1007 21 0 0 0 chr13 55402054 55402075 -64882237 + AT_rich Low_complexity Low_complexity 1 21 0 1 1007 690 158 0 0 chr13 55403491 55403605 -64880707 - URR1B DNA MER1_type -3 222 109 1 1007 220 27 54 0 chr13 55403605 55403642 -64880670 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1007 1121 65 0 0 chr13 55403642 55403780 -64880532 - B1_Mus1 SINE Alu -10 138 1 1 1007 987 123 0 0 chr13 55404488 55404626 -64879686 + B1_Mur3 SINE Alu 6 143 -6 1 1007 660 224 196 27 chr13 55404662 55404846 -64879466 - B3 SINE B2 0 216 2 1 1007 267 237 263 0 chr13 55404867 55404943 -64879369 - B1_Mm SINE Alu -51 96 1 1 1007 281 240 27 0 chr13 55404949 55405024 -64879288 - L1ME3 LINE L1 -229 5933 5857 1 1007 517 143 38 36 chr13 55405064 55405176 -64879136 - B1_Mur4 SINE Alu -22 128 3 1 1007 692 142 96 17 chr13 55405185 55405300 -64879012 - B1_Mur1 SINE Alu 0 149 26 1 1007 3172 42 50 2 chr13 55405445 55405849 -64878463 - L1Md_F3 LINE L1 0 6584 6162 1 1007 21 0 0 0 chr13 55405890 55405911 -64878401 + AT_rich Low_complexity Low_complexity 1 21 0 1 1007 655 197 60 0 chr13 55405919 55406036 -64878276 - B3 SINE B2 -92 124 1 1 1007 240 312 39 0 chr13 55406071 55406148 -64878164 - ID4 SINE ID -3 80 1 1 1007 570 262 52 26 chr13 55406535 55406727 -64877585 - B3A SINE B2 0 198 2 1 1007 565 209 50 17 chr13 55406753 55406889 -64877423 - B1_Mur1 SINE Alu -3 146 8 1 1007 26 0 0 0 chr13 55406889 55406915 -64877397 + AT_rich Low_complexity Low_complexity 1 26 0 1 1007 250 267 33 0 chr13 55406939 55406999 -64877313 - ID SINE ID -136 88 27 1 1007 1420 70 16 0 chr13 55407607 55407793 -64876519 - B2_Mm2 SINE B2 0 195 7 1 1007 708 207 13 40 chr13 55408046 55408197 -64876115 + B1_Mus2 SINE Alu 1 147 0 1 1007 425 241 178 13 chr13 55408882 55409016 -64875296 - B1_Mus1 SINE Alu -4 145 5 1 1007 520 235 45 15 chr13 55409217 55409351 -64874961 - B1_Mm SINE Alu -9 138 1 1 1007 396 266 35 35 chr13 55409435 55409579 -64874733 - B1_Mur1 SINE Alu -5 144 1 1 1007 1661 32 0 0 chr13 55409589 55409778 -64874534 - B2_Mm1a SINE B2 -3 190 2 1 1007 1382 96 11 0 chr13 55410222 55410410 -64873902 + B2_Mm1t SINE B2 1 190 -3 1 1007 421 262 55 27 chr13 55410730 55410840 -64873472 + PB1D10 SINE Alu 5 117 0 1 1007 396 303 38 38 chr13 55410848 55411006 -64873306 + RSINE1 SINE B4 5 162 -3 1 1007 688 196 7 33 chr13 55411046 55411199 -64873113 + B1_Mur2 SINE Alu 1 149 0 1 1007 709 278 13 70 chr13 55411292 55411520 -64872792 - B3 SINE B2 0 216 2 1 1007 271 231 0 82 chr13 55413000 55413085 -64871227 + B1_Mur2 SINE Alu 71 148 -1 1 1007 194 0 39 0 chr13 55415721 55415747 -64868565 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1 1007 195 184 0 0 chr13 55417164 55417202 -64867110 + CT-rich Low_complexity Low_complexity 1 38 0 1 1007 201 74 0 0 chr13 55418200 55418227 -64866085 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1007 291 308 77 0 chr13 55419954 55420045 -64864267 - PB1D7 SINE Alu -7 113 16 1 1007 440 241 27 18 chr13 55420293 55420403 -64863909 - PB1D9 SINE Alu -4 116 6 1 1007 1018 72 56 28 chr13 55420407 55420550 -64863762 - B1_Mus1 SINE Alu 0 148 2 1 1007 551 234 16 0 chr13 55420572 55420700 -64863612 - B1_Mus2 SINE Alu 0 147 18 1 1007 1041 95 0 45 chr13 55424655 55424810 -64859502 - B1_Mus1 SINE Alu 0 148 1 1 1007 243 200 0 20 chr13 55426466 55426517 -64857795 - MIR SINE MIR -92 116 67 1 1007 505 218 40 0 chr13 55426513 55426614 -64857698 + L2a LINE L2 3304 3408 -18 1 1007 1220 41 0 33 chr13 55427914 55428066 -64856246 - B1_Mus1 SINE Alu 0 148 2 1 1007 1057 51 72 14 chr13 55428151 55428290 -64856022 + B1_Mus2 SINE Alu 1 147 0 1 1007 360 227 40 0 chr13 55428325 55428400 -64855912 + ID2 SINE ID 4 81 -2 1 1007 465 66 0 0 chr13 55429011 55429072 -64855240 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1007 237 33 0 0 chr13 55429090 55429120 -64855192 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 1007 267 0 0 65 chr13 55430388 55430434 -64853878 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1007 396 0 0 0 chr13 55430466 55430510 -64853802 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1007 232 147 20 59 chr13 55431129 55431230 -64853082 + (CCCCG)n Simple_repeat Simple_repeat 2 98 0 1 1007 207 0 0 0 chr13 55432102 55432125 -64852187 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1007 441 272 53 0 chr13 55432268 55432382 -64851930 - ID_B1 SINE B4 -10 214 95 1 1007 225 0 0 0 chr13 55432778 55432803 -64851509 + (TTGG)n Simple_repeat Simple_repeat 4 28 0 1 1007 986 76 20 46 chr13 55432853 55433005 -64851307 - B1_Mus1 SINE Alu 0 148 1 1 1007 1058 115 121 0 chr13 55433183 55433357 -64850955 + B2_Mm2 SINE B2 1 195 0 1 1007 920 208 58 15 chr13 55433798 55434003 -64850309 - B3 SINE B2 0 216 3 1 1007 1358 81 43 0 chr13 55434014 55434199 -64850113 - B2_Mm2 SINE B2 -1 194 2 1 1007 1189 111 18 0 chr13 55434202 55434373 -64849939 - B2_Mm2 SINE B2 -19 176 3 1 1007 239 297 0 15 chr13 55434592 55434657 -64849655 - tRNA-Ala-GCY_ tRNA tRNA -8 67 4 1 1007 547 215 134 24 chr13 55434873 55435064 -64849248 + MTD LTR MaLR 184 421 0 1 1007 260 104 0 20 chr13 55435104 55435153 -64849159 + B3 SINE B2 168 215 -1 1 1007 410 174 120 20 chr13 55435183 55435283 -64849029 + PB1D9 SINE Alu 9 118 -2 1 1007 231 215 56 122 chr13 55435289 55435379 -64848933 - RSINE1 SINE B4 -7 158 75 1 1007 276 172 0 0 chr13 55435646 55435704 -64848608 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1007 1175 62 7 0 chr13 55436149 55436294 -64848018 + B1_Mus2 SINE Alu 1 146 -1 1 1007 679 152 226 26 chr13 55436311 55436466 -64847846 + B2_Mm2 SINE B2 2 187 -8 1 1007 2463 137 195 11 chr13 55436466 55436939 -64847373 + RMER4B LTR ERVK 17 578 -7 1 1007 1633 145 34 10 chr13 55437163 55437456 -64846856 + ORR1D1 LTR MaLR 1 300 -74 1 1007 753 208 21 0 chr13 55437471 55437615 -64846697 - B1_Mur2 SINE Alu -1 148 2 1 1007 437 48 81 0 chr13 55437618 55437680 -64846632 + ORR1D1 LTR MaLR 308 374 0 1 1007 348 133 0 91 chr13 55438194 55438260 -64846052 - PB1D9 SINE Alu 0 120 61 1 1007 210 37 0 0 chr13 55438260 55438287 -64846025 + (CCTG)n Simple_repeat Simple_repeat 3 29 0 1 1007 1335 114 62 0 chr13 55438373 55438583 -64845729 - URR1B DNA MER1_type -2 223 1 1 1007 886 203 35 20 chr13 55439323 55439524 -64844788 - B3 SINE B2 -4 212 9 1 1007 213 39 0 0 chr13 55439555 55439581 -64844731 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1007 632 81 30 35 chr13 55439581 55439681 -64844631 - B1_Mus2 SINE Alu -10 137 1 1 1007 1352 118 34 56 chr13 55440085 55440128 -64844184 - ORR1A4 LTR MaLR -8 321 279 1 1007 1077 111 116 0 chr13 55440128 55440300 -64844012 - B2_Mm2 SINE B2 -3 192 1 1 1007 1352 118 34 56 chr13 55440300 55440490 -64843822 - ORR1A4 LTR MaLR -51 278 93 1 1007 1715 143 15 58 chr13 55440490 55440816 -64843496 - RLTRETN_Mm LTR ERVK 0 322 11 1 1007 719 113 21 30 chr13 55440799 55440932 -64843380 - ORR1A4 LTR MaLR -237 137 1 1 1007 256 241 0 33 chr13 55440957 55441017 -64843295 + RLTR13D3 LTR ERVK 1 58 -1056 1 1007 1208 62 0 0 chr13 55441123 55441269 -64843043 - B1_Mus2 SINE Alu 0 147 2 1 1007 341 66 351 27 chr13 55441338 55441449 -64842863 - B2_Mm2 SINE B2 -2 193 47 1 1007 1219 116 35 0 chr13 55441500 55441673 -64842639 - B2_Mm1t SINE B2 -14 179 1 1 1007 219 148 56 0 chr13 55441817 55441857 -64842455 + A-rich Low_complexity Low_complexity 4 46 0 1 1007 1181 68 7 0 chr13 55441857 55442004 -64842308 + B1_Mus1 SINE Alu 1 148 0 1 1007 219 148 56 0 chr13 55442004 55442017 -64842295 + A-rich Low_complexity Low_complexity 47 59 0 1 1007 237 185 131 36 chr13 55442323 55442407 -64841905 + RLTR13B2 LTR ERVK 664 755 -67 1 1007 541 96 0 0 chr13 55442568 55442641 -64841671 - B1_Mus1 SINE Alu -67 81 9 1 1007 2481 222 133 64 chr13 55442867 55443027 -64841285 + RLTR13D1 LTR ERVK 1 161 -862 1 1007 1399 39 55 6 chr13 55443027 55443209 -64841103 - B2_Mm1a SINE B2 -1 192 2 1 125 3014 148 92 32 chr13 55443209 55443999 -64840313 + RLTR13D1 LTR ERVK 162 965 -58 1 1008 631 279 90 0 chr13 55444233 55444455 -64839857 + RLTR42-int LTR ERVK 1102 1343 -4179 1 1008 274 231 50 25 chr13 55445149 55445229 -64839083 - MLT1L LTR MaLR -7 603 522 1 1008 442 262 124 4 chr13 55448789 55448944 -64835368 + B3A SINE B2 3 172 -44 1 1008 477 250 26 0 chr13 55448987 55449103 -64835209 + ID_B1 SINE B4 80 198 -26 1 1008 342 91 0 0 chr13 55449620 55449675 -64834637 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1008 1639 10 0 20 chr13 55450727 55450924 -64833388 + B2_Mm1a SINE B2 1 193 0 1 1008 530 246 66 0 chr13 55450939 55451061 -64833251 + B1_Mur1 SINE Alu 6 135 -14 1 1008 1354 83 0 6 chr13 55451315 55451497 -64832815 - B2_Mm2 SINE B2 -14 181 1 1 1008 302 242 86 21 chr13 55453296 55453389 -64830923 + B1F1 SINE Alu 33 131 -18 1 1008 1318 90 37 0 chr13 55453596 55453784 -64830528 + B2_Mm2 SINE B2 1 195 0 1 1008 533 253 30 42 chr13 55453792 55453957 -64830355 + RSINE1 SINE B4 3 165 0 1 1008 249 222 118 32 chr13 55454009 55454102 -64830210 + B1F SINE Alu 49 149 0 1 1008 1221 77 0 0 chr13 55454727 55454895 -64829417 - B2_Mm2 SINE B2 -27 168 1 1 1008 566 140 10 0 chr13 55454930 55455030 -64829282 + (TCCC)n Simple_repeat Simple_repeat 3 103 0 1 1008 314 135 0 0 chr13 55455075 55455127 -64829185 - B1F SINE Alu -97 52 1 1 1008 269 183 0 77 chr13 55455127 55455140 -64829172 - ID_B1 SINE B4 -91 133 74 1 1008 481 174 24 80 chr13 55455300 55455425 -64828887 + MTD LTR MaLR 302 419 0 1 1008 489 217 28 19 chr13 55456989 55457097 -64827215 - B3A SINE B2 -87 111 3 1 1008 373 289 0 73 chr13 55457099 55457222 -64827090 - ID_B1 SINE B4 0 224 111 1 1008 251 306 19 0 chr13 55457743 55457830 -64826482 - PB1D10 SINE Alu -23 126 33 1 1008 495 213 159 40 chr13 55457897 55458073 -64826239 + B3A SINE B2 1 197 -1 1 1008 705 137 16 0 chr13 55458132 55458256 -64826056 + B3 SINE B2 5 130 -86 1 1008 486 0 0 0 chr13 55458288 55458342 -64825970 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1008 254 284 146 10 chr13 55458651 55458754 -64825558 - RSINE1 SINE B4 -46 119 3 1 1008 1040 96 14 0 chr13 55458812 55458958 -64825354 - B1_Mus1 SINE Alu 0 148 1 1 1008 188 318 15 31 chr13 55458985 55459050 -64825262 - L4 LINE RTE -167 1862 1799 1 1008 357 234 149 0 chr13 55459075 55459169 -64825143 + PB1 SINE Alu 20 127 0 1 1008 642 265 84 19 chr13 55459295 55459510 -64824802 + B4A SINE B4 1 229 -63 1 1008 505 212 35 17 chr13 55459513 55459628 -64824684 + B1_Mur1 SINE Alu 2 118 -31 1 1008 328 315 53 15 chr13 55459516 55459648 -64824664 + ID_B1 SINE B4 86 222 -2 1 1008 557 243 141 16 chr13 55459664 55459786 -64824526 + B4 SINE B4 2 123 -169 1 1008 198 0 0 0 chr13 55459786 55459808 -64824504 + (G)n Simple_repeat Simple_repeat 1 22 0 1 1008 557 243 141 16 chr13 55459808 55459940 -64824372 + B4 SINE B4 124 287 -5 1 1008 317 313 61 8 chr13 55459972 55460104 -64824208 + ID_B1 SINE B4 83 221 -3 1 1008 210 307 51 39 chr13 55460222 55460300 -64824012 - PB1D9 SINE Alu -31 89 11 1 1008 613 261 18 91 chr13 55460464 55460671 -64823641 - B3A SINE B2 -22 194 1 1 1008 654 245 90 45 chr13 55460671 55460888 -64823424 - B4A SINE B4 -63 229 3 1 1008 1016 52 81 0 chr13 55461344 55461480 -64822832 - B1_Mus2 SINE Alu 0 147 1 1 1008 1030 87 0 0 chr13 55461736 55461874 -64822438 - B1_Mus1 SINE Alu -9 139 2 1 1008 265 281 10 60 chr13 55461984 55462084 -64822228 + ID4 SINE ID 12 107 -45 1 1008 186 341 63 85 chr13 55463134 55463323 -64820989 + MIRb SINE MIR 56 240 -28 1 1008 29 0 0 0 chr13 55464765 55464794 -64819518 + AT_rich Low_complexity Low_complexity 1 29 0 1 1008 411 243 0 0 chr13 55464869 55464943 -64819369 - B1_Mur4 SINE Alu -63 87 14 1 1008 294 313 51 77 chr13 55464942 55465091 -64819221 - MER2 DNA MER2_type -108 237 94 1 1008 1051 116 0 0 chr13 55465091 55465238 -64819074 - B1_Mus1 SINE Alu 0 148 2 1 1008 1936 142 101 40 chr13 55465243 55465332 -64818980 + MTC LTR MaLR 1 96 -325 1 1008 1364 81 16 0 chr13 55465332 55465518 -64818794 + B2_Mm2 SINE B2 2 190 -5 1 1008 1936 142 101 40 chr13 55465518 55465825 -64818487 + MTC LTR MaLR 97 421 0 1 1008 1252 77 49 0 chr13 55465832 55466015 -64818297 + B2_Mm1a SINE B2 2 193 0 1 1008 294 313 51 77 chr13 55466015 55466086 -64818226 - MER2 DNA MER2_type -263 82 10 1 1008 451 282 61 8 chr13 55466466 55466598 -64817714 + ID_B1 SINE B4 84 222 -2 1 1008 699 208 181 10 chr13 55466636 55466840 -64817472 + MTEb LTR MaLR 1 239 -140 1 1008 398 112 0 19 chr13 55467094 55467174 -64817138 - ORR1A3 LTR MaLR 0 346 272 1 1008 779 31 0 0 chr13 55467218 55467314 -64816998 + B2_Mm2 SINE B2 1 96 -99 1 1008 1074 85 0 0 chr13 55467455 55467596 -64816716 + B1_Mus1 SINE Alu 2 142 -6 1 1008 277 115 19 0 chr13 55468171 55468223 -64816089 + MusHAL1 LINE L1 871 923 -1789 1 1008 303 79 286 0 chr13 55468300 55468363 -64815949 - ORR1A3 LTR MaLR -246 81 1 1 1008 265 242 54 116 chr13 55468390 55468502 -64815810 - ID_B1 SINE B4 -21 203 99 1 1008 393 175 62 12 chr13 55468427 55468508 -64815804 - B1F SINE Alu -53 96 12 1 1008 180 111 0 0 chr13 55468521 55468548 -64815764 + (CTTG)n Simple_repeat Simple_repeat 1 27 0 1 1008 623 226 0 16 chr13 55468599 55468725 -64815587 - ID_B1 SINE B4 -99 125 2 1 1008 234 341 106 0 chr13 55468947 55469070 -64815242 - MLT1J2 LTR MaLR -94 354 219 1 1008 404 328 8 25 chr13 55469085 55469207 -64815105 + RSINE1 SINE B4 38 157 -8 1 1008 410 146 0 12 chr13 55469229 55469312 -64815000 + CT-rich Low_complexity Low_complexity 1 82 0 1 1008 1260 105 16 16 chr13 55469312 55469506 -64814806 - B2_Mm2 SINE B2 0 195 2 1 1008 531 300 48 82 chr13 55469540 55469856 -64814456 + MLT1A0 LTR MaLR 36 340 -25 1 1008 1057 193 41 0 chr13 55469878 55470075 -64814237 - B3 SINE B2 -10 206 2 1 1008 348 211 132 11 chr13 55470091 55470182 -64814130 - B1_Mur1 SINE Alu -1 148 47 1 1008 312 258 75 0 chr13 55470427 55470523 -64813789 - B1F2 SINE Alu -13 107 3 1 1008 402 100 0 0 chr13 55470959 55471019 -64813293 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1008 399 41 0 0 chr13 55471849 55471898 -64812414 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1008 570 223 0 7 chr13 55474151 55474291 -64810021 + B1F2 SINE Alu 2 140 -9 1 1008 264 294 25 76 chr13 55474395 55474513 -64809799 + MIRb SINE MIR 112 223 -45 1 1008 182 353 45 45 chr13 55476076 55476165 -64808147 - MIRb SINE MIR -168 100 12 1 1008 183 327 95 32 chr13 55476230 55476388 -64807924 - MIR SINE MIR -15 247 80 1 1008 275 243 43 0 chr13 55477311 55477381 -64806931 + MER5A1 DNA MER1_type 4 76 -90 1 1008 1053 99 0 0 chr13 55477595 55477747 -64806565 + (TTC)n Simple_repeat Simple_repeat 2 153 0 1 1008 201 39 0 0 chr13 55477847 55477873 -64806439 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1008 261 352 0 0 chr13 55477902 55477990 -64806322 - Charlie2a DNA MER1_type -2731 130 43 1 1008 470 125 12 0 chr13 55478503 55478583 -64805729 + (GAAA)n Simple_repeat Simple_repeat 2 82 0 1 1008 1064 59 0 0 chr13 55479112 55479247 -64805065 + B1_Mus2 SINE Alu 1 135 -12 1 1008 285 51 0 0 chr13 55479249 55479288 -64805024 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1008 252 170 0 0 chr13 55481666 55481719 -64802593 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1008 511 91 0 43 chr13 55481881 55481973 -64802339 - Lx LINE L1 -3 6651 6564 1 1008 789 199 7 0 chr13 55481977 55482123 -64802189 - B1_Mus2 SINE Alu 0 147 1 1 1008 620 176 69 56 chr13 55483836 55483980 -64800332 - B1_Mur2 SINE Alu -1 148 3 1 1008 24 32 0 0 chr13 55486015 55486046 -64798266 + AT_rich Low_complexity Low_complexity 1 31 0 1 1008 281 310 61 9 chr13 55486625 55486739 -64797573 + MLT1K LTR MaLR 135 254 -341 1 1008 805 200 142 26 chr13 55486749 55486939 -64797373 + B3 SINE B2 1 212 -4 1 1008 1894 102 67 32 chr13 55487477 55487792 -64796520 - ORR1A3 LTR MaLR 0 326 1 1 1008 419 327 74 16 chr13 55488570 55488828 -64795484 + B4A SINE B4 2 274 -18 1 1008 353 176 9 0 chr13 55488875 55488983 -64795329 + (CA)n Simple_repeat Simple_repeat 2 110 0 1 1008 639 84 271 0 chr13 55489003 55489110 -64795202 - B1_Mus1 SINE Alu -12 136 1 1 1008 27 0 0 0 chr13 55489125 55489152 -64795160 + AT_rich Low_complexity Low_complexity 1 27 0 1 1008 278 243 0 14 chr13 55489323 55489394 -64794918 - MLT1A1 LTR MaLR 0 408 339 1 1008 252 0 0 0 chr13 55489458 55489486 -64794826 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 1 1008 2351 87 12 0 chr13 55489541 55489864 -64794448 + ORR1A2 LTR MaLR 1 327 0 1 1008 482 183 48 0 chr13 55490084 55490188 -64794124 + B1F SINE Alu 12 120 -29 1 1008 201 94 0 0 chr13 55490875 55490907 -64793405 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 1008 348 277 68 23 chr13 55490920 55491053 -64793259 - RMER15 LTR ERVL -14 561 423 1 1008 1553 21 21 0 chr13 55491573 55491762 -64792550 - B2_Mm1a SINE B2 0 193 1 1 1008 1494 22 0 17 chr13 55491762 55491943 -64792369 - B2_Mm1t SINE B2 -15 178 1 1 1008 1133 75 0 0 chr13 55492711 55492858 -64791454 + B1_Mus2 SINE Alu 1 147 0 1 1008 189 0 0 0 chr13 55492858 55492879 -64791433 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 1 1008 243 0 0 0 chr13 55493208 55493235 -64791077 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1008 698 201 22 0 chr13 55493448 55493582 -64790730 + B1_Mur1 SINE Alu 1 137 -12 1 1008 622 0 26 0 chr13 55493582 55493660 -64790652 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 1 1008 394 270 0 10 chr13 55493957 55494058 -64790254 + PB1D10 SINE Alu 12 111 -6 1 1008 320 243 225 0 chr13 55494181 55494292 -64790020 + B1_Mur3 SINE Alu 3 138 -11 1 1008 222 37 0 0 chr13 55494292 55494319 -64789993 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1008 898 156 122 11 chr13 55494362 55494550 -64789762 + B3 SINE B2 2 210 -6 1 1008 217 348 70 0 chr13 55494814 55494972 -64789340 + L2 LINE L2 2059 2227 -1192 1 1008 1151 110 17 56 chr13 55495036 55495267 -64789045 - Lx LINE L1 -9 6645 6424 1 1008 557 249 29 10 chr13 55495603 55495740 -64788572 + RSINE1 SINE B4 3 138 -27 1 1008 267 79 0 0 chr13 55496486 55496524 -64787788 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 1 1008 378 202 29 57 chr13 55496524 55496629 -64787683 - PB1D9 SINE Alu -18 102 1 1 1008 1097 67 96 18 chr13 55496668 55496835 -64787477 - B2_Mm2 SINE B2 -14 181 2 1 1008 840 169 7 20 chr13 55496850 55497001 -64787311 + B1_Mur4 SINE Alu 2 150 0 1 1008 660 59 0 0 chr13 55497047 55497132 -64787180 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 1 1008 5458 166 33 25 chr13 55497132 55498203 -64786109 - MTC-int LTR MaLR -178 1080 2 1 1008 1678 161 98 22 chr13 55498197 55498514 -64785798 - MTC LTR MaLR 0 421 81 1 1008 225 0 0 0 chr13 55498556 55498581 -64785731 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1 1008 738 175 198 6 chr13 55498582 55498749 -64785563 - B3 SINE B2 -17 199 1 1 1008 620 200 146 0 chr13 55498886 55499016 -64785296 + B1_Mur2 SINE Alu 1 149 0 1 1008 1096 52 0 0 chr13 55499020 55499155 -64785157 + B1_Mus2 SINE Alu 1 135 -12 1 1008 798 205 81 6 chr13 55499828 55500000 -64784312 + URR1B DNA MER1_type 3 187 -38 1 1008 525 71 0 0 chr13 55501256 55501326 -64782986 + (CCCTG)n Simple_repeat Simple_repeat 5 74 0 1 1008 233 363 104 8 chr13 55501397 55501522 -64782790 + L2b LINE L2 3224 3360 -15 2 1008 304 295 13 0 chr13 55501525 55501603 -64782709 + ID4_ SINE ID 1 79 -4 3 1008 815 219 119 5 chr13 55502942 55503135 -64781177 + B3 SINE B2 2 216 0 4 1008 363 320 165 28 chr13 55503310 55503522 -64780790 + B4A SINE B4 1 241 -51 5 1008 449 84 14 0 chr13 55503556 55503627 -64780685 + (CA)n Simple_repeat Simple_repeat 1 72 0 6 1008 233 204 0 18 chr13 55503639 55503694 -64780618 - MLT2C1 LTR ERVL -343 54 1 7 1008 315 0 0 0 chr13 55504541 55504576 -64779736 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 1008 343 233 0 52 chr13 55504913 55504990 -64779322 + MER5A DNA MER1_type 1 73 -116 9 1008 321 222 61 12 chr13 55506399 55506481 -64777831 - L1M4b LINE L1 -5070 2264 2179 1 1008 209 219 15 59 chr13 55506677 55506745 -64777567 - MIRc SINE MIR -103 165 101 1 1008 210 315 43 58 chr13 55507249 55507387 -64776925 - MIRb SINE MIR -131 137 2 1 1008 464 275 46 31 chr13 55508028 55508193 -64776119 - B3 SINE B2 -2 193 25 1 1008 407 224 23 34 chr13 55508388 55508476 -64775836 - PB1D7 SINE Alu 0 120 34 1 1008 336 309 9 26 chr13 55509050 55509163 -64775149 + PB1D10 SINE Alu 6 116 -1 1 1008 317 300 60 30 chr13 55509294 55509474 -64774838 + MER102b DNA MER1_type 122 318 -23 1 1008 258 81 0 0 chr13 55510739 55510776 -64773536 + (CTTTG)n Simple_repeat Simple_repeat 2 38 0 1 1008 668 224 15 0 chr13 55510776 55510910 -64773402 - B1_Mur3 SINE Alu -9 140 5 1 1008 509 303 0 0 chr13 55510935 55511067 -64773245 - ID_B1 SINE B4 -6 218 87 1 1008 300 278 93 17 chr13 55511539 55511641 -64772671 + B1F1 SINE Alu 2 98 -49 2 1008 189 107 0 0 chr13 55511642 55511670 -64772642 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2 1008 836 140 48 20 chr13 55511673 55511819 -64772493 - B1_Mur4 SINE Alu 0 150 1 2 1008 593 221 20 73 chr13 55511819 55511969 -64772343 - B1_Mur1 SINE Alu -5 144 2 2 1008 654 251 43 5 chr13 55512000 55512188 -64772124 + B4 SINE B4 30 224 -68 2 1008 808 185 29 7 chr13 55512190 55512326 -64771986 + B1_Mur4 SINE Alu 1 139 -11 2 1008 477 250 0 10 chr13 55512430 55512531 -64771781 + PB1D7 SINE Alu 1 100 -20 2 1008 569 220 53 0 chr13 55513049 55513181 -64771131 - B1_Mur1 SINE Alu -1 148 10 2 1008 311 303 67 27 chr13 55513053 55513202 -64771110 - ID_B1 SINE B4 -5 219 65 2 1008 234 150 0 0 chr13 55514057 55514097 -64770215 + (A)n Simple_repeat Simple_repeat 1 40 0 2 1008 455 217 211 24 chr13 55514121 55514244 -64770068 + B1F SINE Alu 1 146 -3 3 1008 481 297 71 0 chr13 55515533 55515688 -64768624 + MER2B DNA MER2_type 166 331 -5 3 1008 392 245 136 26 chr13 55516758 55516913 -64767399 + B3A SINE B2 1 172 -26 3 1008 193 0 94 0 chr13 55516918 55516950 -64767362 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 3 1008 241 190 0 17 chr13 55516962 55517022 -64767290 + B3 SINE B2 33 91 -107 3 1008 1035 22 71 29 chr13 55517092 55517232 -64767080 - B1_Mm SINE Alu 0 147 2 3 1008 1565 33 28 0 chr13 55517253 55517433 -64766879 - B2_Mm1t SINE B2 -7 186 2 3 1008 1263 94 5 68 chr13 55517478 55517642 -64766670 + B2_Mm1t SINE B2 2 166 -27 3 1008 1360 79 17 17 chr13 55517642 55517822 -64766490 - B2_Mm2 SINE B2 -14 181 2 3 1008 1263 94 5 68 chr13 55517822 55517853 -64766459 + B2_Mm1t SINE B2 167 184 -9 3 1008 1189 68 0 0 chr13 55517853 55517999 -64766313 + B1_Mus2 SINE Alu 2 147 0 3 1008 515 247 26 39 chr13 55518009 55518165 -64766147 + RSINE1 SINE B4 12 165 0 4 1008 1409 66 44 0 chr13 55518165 55518187 -64766125 - B2_Mm1a SINE B2 -2 191 162 4 1008 243 0 0 0 chr13 55518187 55518214 -64766098 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 4 1008 1409 66 44 0 chr13 55518214 55518374 -64765938 - B2_Mm1a SINE B2 -32 161 2 4 1008 25 31 0 0 chr13 55518374 55518406 -64765906 + AT_rich Low_complexity Low_complexity 1 32 0 4 1008 305 254 171 26 chr13 55518406 55518523 -64765789 + B1_Mur1 SINE Alu 1 134 -15 4 1008 212 143 18 109 chr13 55518958 55519013 -64765299 - ID4 SINE ID 0 83 34 4 1008 270 288 87 16 chr13 55519059 55519186 -64765126 - MER5B DNA MER1_type -5 173 38 4 1008 913 227 24 67 chr13 55520196 55520317 -64763995 + MTD LTR MaLR 1 119 -300 4 1008 1712 31 0 0 chr13 55520317 55520510 -64763802 - B2_Mm1a SINE B2 0 193 1 4 1008 913 227 24 67 chr13 55520510 55520643 -64763669 + MTD LTR MaLR 120 244 -175 4 1008 637 164 0 107 chr13 55520618 55520768 -64763544 + B1_Mus1 SINE Alu 15 148 0 4 1008 336 143 0 0 chr13 55520782 55520838 -64763474 + (GGA)n Simple_repeat Simple_repeat 2 57 0 5 1008 636 242 156 0 chr13 55520873 55521059 -64763253 + B3 SINE B2 1 215 -1 5 1008 655 243 79 42 chr13 55521070 55521285 -64763027 + MTD LTR MaLR 197 419 0 4 1008 426 20 0 0 chr13 55523895 55523946 -64760366 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1008 406 209 84 112 chr13 55524273 55524451 -64759861 + MT2B LTR ERVL 92 264 -337 5 1008 805 91 0 24 chr13 55524352 55524476 -64759836 + B1_Mur4 SINE Alu 17 137 -13 5 1008 405 0 0 0 chr13 55524479 55524524 -64759788 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 5 1008 188 32 97 0 chr13 55524613 55524644 -64759668 + (TTTTG)n Simple_repeat Simple_repeat 4 37 0 5 1008 1013 83 0 8 chr13 55524660 55524794 -64759518 - B1_Mus1 SINE Alu -11 137 5 5 1008 648 182 0 0 chr13 55524988 55525120 -64759192 + (CA)n Simple_repeat Simple_repeat 2 133 0 5 1008 380 264 0 0 chr13 55525133 55525205 -64759107 + ID4 SINE ID 2 73 -10 5 1008 765 265 50 46 chr13 55525216 55525477 -64758835 - MER82 DNA MER2_type -292 361 100 6 1008 1554 62 5 0 chr13 55525560 55525752 -64758560 + B2_Mm1a SINE B2 1 193 0 6 1008 231 111 56 0 chr13 55525760 55525814 -64758498 + Lx9 LINE L1 7567 7623 -21 6 1008 669 149 0 0 chr13 55525814 55525928 -64758384 + (TA)n Simple_repeat Simple_repeat 2 115 0 6 1008 1197 49 14 0 chr13 55525931 55526075 -64758237 - B1_Mus1 SINE Alu 0 148 3 6 1008 186 302 0 36 chr13 55526158 55526213 -64758099 + L2b LINE L2 3312 3364 -11 6 1008 575 27 14 0 chr13 55526214 55526287 -64758025 + (TTC)n Simple_repeat Simple_repeat 2 75 0 6 1008 1079 161 16 26 chr13 55526601 55526792 -64757520 + B2_Mm2 SINE B2 2 190 -5 6 1008 1184 95 66 22 chr13 55526792 55526975 -64757337 - B2_Mm2 SINE B2 -1 194 4 6 1008 21 36 0 0 chr13 55526984 55527012 -64757300 + AT_rich Low_complexity Low_complexity 1 28 0 6 1008 308 225 11 91 chr13 55527017 55527105 -64757207 - ID4 SINE ID 0 83 3 7 1008 747 306 86 117 chr13 55528463 55528789 -64755523 - MLT1E3 LTR MaLR -6 618 278 7 1008 849 246 59 5 chr13 55528789 55528993 -64755319 + B3 SINE B2 2 216 0 7 1008 747 306 86 117 chr13 55528993 55529144 -64755168 - MLT1E3 LTR MaLR -347 277 156 7 1008 441 259 68 17 chr13 55529158 55529276 -64755036 + B1_Mur1 SINE Alu 8 131 -18 7 1008 224 277 123 0 chr13 55529457 55529522 -64754790 + ID4_ SINE ID 11 83 0 7 1008 804 21 0 0 chr13 55529749 55529843 -64754469 + (TCCC)n Simple_repeat Simple_repeat 2 95 0 7 1008 314 219 14 0 chr13 55529901 55529974 -64754338 - B1_Mus2 SINE Alu -69 78 5 7 1008 237 340 93 9 chr13 55530857 55530884 -64753428 - PB1D10 SINE Alu -1 116 33 7 1008 239 246 42 42 chr13 55530884 55530956 -64753356 - ID_B1 SINE B4 -63 161 90 7 1008 457 227 191 64 chr13 55531125 55531313 -64752999 + RMER21B LTR ERV1 353 564 -278 7 1008 1202 81 0 0 chr13 55531478 55531626 -64752686 + B1_Mus1 SINE Alu 1 148 0 8 1008 229 278 19 0 chr13 55531652 55531706 -64752606 - MurSatRep1 Unknown Unknown -1854 283 229 8 1008 1388 75 32 11 chr13 55531822 55532012 -64752300 - B2_Mm2 SINE B2 0 195 2 8 1008 899 273 8 28 chr13 55532069 55532318 -64751994 + RMER15 LTR ERVL 273 516 -59 8 1008 1318 213 207 45 chr13 55532323 55532810 -64751502 + RMER4B LTR ERVK 14 579 -6 8 1008 270 81 0 0 chr13 55533166 55533203 -64751109 + (TCC)n Simple_repeat Simple_repeat 2 38 0 8 1008 711 241 7 0 chr13 55533203 55533344 -64750968 - B1_Mur2 SINE Alu -6 143 2 8 1008 768 341 82 31 chr13 55533375 55533433 -64750879 - L1MA4 LINE L1 -174 6006 5951 8 1008 311 44 22 0 chr13 55533433 55533478 -64750834 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1008 1308 298 91 18 chr13 55533478 55534162 -64750150 - L1MA4 LINE L1 -230 5950 5140 8 1008 947 116 20 0 chr13 55534162 55534308 -64750004 - B1_Mur4 SINE Alu -1 149 1 8 1008 863 324 153 30 chr13 55534308 55534487 -64749825 - L1MA4 LINE L1 -741 5139 4952 8 1008 252 250 0 18 chr13 55534527 55534584 -64749728 - MLT1L LTR MaLR -212 398 343 9 1008 388 248 66 47 chr13 55534756 55534862 -64749450 + RSINE1 SINE B4 12 119 -46 9 1008 234 0 0 0 chr13 55534878 55534904 -64749408 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 1008 335 240 47 28 chr13 55534924 55535031 -64749281 - MLT1L LTR MaLR -360 250 142 9 1008 1207 194 32 43 chr13 55535518 55535798 -64748514 - RLTR46 LTR ERVK -2 318 42 9 1008 712 135 0 0 chr13 55535807 55535918 -64748394 - IAPEY3-int LTR ERVK 0 7581 7471 9 1008 2610 50 0 0 chr13 55535938 55536255 -64748057 - RLTR10-int LTR ERVK -188 1799 1483 9 1008 3201 149 5 89 chr13 55536254 55536894 -64747418 - IAPEY3-int LTR ERVK -147 7434 6849 9 1008 5381 216 4 8 chr13 55536913 55538191 -64746121 - IAPEY3-int LTR ERVK -1882 5699 4406 9 1008 3947 251 38 24 chr13 55538177 55539175 -64745137 - IAPEY3-int LTR ERVK -6129 1551 540 9 1008 402 267 42 96 chr13 55539181 55539382 -64744930 - IAPEY3-int LTR ERVK -1272 198 3 9 1008 1202 207 25 36 chr13 55539383 55539663 -64744649 - RLTR46 LTR ERVK -2 318 42 9 1008 351 0 0 0 chr13 55539705 55539744 -64744568 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1008 258 187 0 157 chr13 55539754 55539843 -64744469 - B4A SINE B4 0 292 218 9 1008 1418 88 0 40 chr13 55539853 55540055 -64744257 - B2_Mm2 SINE B2 0 195 2 9 1008 647 216 7 73 chr13 55540081 55540231 -64744081 - B1_Mur4 SINE Alu -6 144 5 9 1008 462 79 0 0 chr13 55540245 55540308 -64744004 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1 1008 489 165 202 0 chr13 55540326 55540435 -64743877 - B2_Mm2 SINE B2 -60 135 5 1 1008 240 59 0 0 chr13 55540446 55540480 -64743832 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 1008 639 233 23 0 chr13 55540480 55540613 -64743699 - B3A SINE B2 -8 190 55 1 1008 927 248 18 23 chr13 55540666 55540885 -64743427 - B4A SINE B4 -72 220 3 9 1008 269 300 12 12 chr13 55541113 55541194 -64743118 + ID4 SINE ID 1 81 -2 1 1008 243 254 56 0 chr13 55541875 55541946 -64742366 - PB1D10 SINE Alu -30 87 13 1 1008 291 264 89 18 chr13 55542164 55542222 -64742090 + MER3 DNA MER1_type 80 143 -66 1 1008 1614 102 396 29 chr13 55542222 55542535 -64741777 + RLTR23 LTR ERV1 1 428 -2 1 1008 291 264 89 18 chr13 55542535 55542588 -64741724 + MER3 DNA MER1_type 144 198 -11 1 1008 23 0 0 0 chr13 55542747 55542770 -64741542 + AT_rich Low_complexity Low_complexity 1 23 0 1 1008 276 305 49 49 chr13 55542783 55542959 -64741353 - MLT1H1 LTR MaLR -374 186 3 1 1008 867 197 7 0 chr13 55543019 55543166 -64741146 - B1_Mur3 SINE Alu 0 149 2 1 1008 229 313 74 57 chr13 55543198 55543320 -64740992 + PB1 SINE Alu 2 125 -2 1 1008 309 177 0 0 chr13 55544336 55544391 -64739921 + T-rich Low_complexity Low_complexity 8 62 0 1 1008 1156 56 14 0 chr13 55544391 55544533 -64739779 - B1_Mus1 SINE Alu 0 148 5 1 1008 370 257 41 81 chr13 55544946 55545069 -64739243 - RSINE1 SINE B4 -43 122 5 1 1008 198 311 78 70 chr13 55545592 55545734 -64738578 + L2a LINE L2 3284 3426 0 1 1008 23 0 0 0 chr13 55546651 55546674 -64737638 + GC_rich Low_complexity Low_complexity 1 23 0 1 1008 33 56 0 0 chr13 55546697 55546751 -64737561 + GC_rich Low_complexity Low_complexity 1 54 0 1 1008 315 49 0 0 chr13 55546753 55546794 -64737518 + (CCGAG)n Simple_repeat Simple_repeat 4 44 0 1 1008 30 27 0 0 chr13 55546824 55546861 -64737451 + GC_rich Low_complexity Low_complexity 1 37 0 1 1008 217 276 52 38 chr13 55547796 55547899 -64736413 - MIRc SINE MIR -30 178 71 1 1008 543 164 75 33 chr13 55548602 55548722 -64735590 - B1F2 SINE Alu -2 147 23 1 1008 225 344 0 0 chr13 55549026 55549119 -64735193 + G-rich Low_complexity Low_complexity 4 96 0 1 1008 553 175 172 16 chr13 55550039 55550167 -64734145 - B1_Mur2 SINE Alu -1 148 1 1 1008 895 171 14 0 chr13 55550205 55550351 -64733961 - B1_Mus1 SINE Alu 0 148 1 1 1008 207 295 98 28 chr13 55551353 55551510 -64732802 + MIR SINE MIR 32 202 -66 1 1008 387 0 0 0 chr13 55554741 55554784 -64729528 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1008 185 304 103 8 chr13 55555018 55555144 -64729168 + MIRb SINE MIR 95 232 -36 1 1008 23 0 0 0 chr13 55555312 55555335 -64728977 + AT_rich Low_complexity Low_complexity 1 23 0 1 1008 227 224 98 49 chr13 55555364 55555425 -64728887 + ID4_ SINE ID 10 73 -10 1 1008 459 0 0 0 chr13 55556259 55556310 -64728002 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1008 323 242 78 69 chr13 55556707 55556809 -64727503 - HAL1-3A_ME LINE L1 -780 2078 1976 1 1008 492 301 32 49 chr13 55556869 55557054 -64727258 - B3A SINE B2 -16 182 1 1 1008 263 334 201 7 chr13 55557537 55557835 -64726477 - L2a LINE L2 -112 3314 2959 1 1008 23 0 0 0 chr13 55558266 55558289 -64726023 + AT_rich Low_complexity Low_complexity 1 23 0 1 1008 905 126 8 0 chr13 55558407 55558534 -64725778 - B1_Mus2 SINE Alu -18 129 2 1 1008 1281 116 22 0 chr13 55558543 55558724 -64725588 - B2_Mm2 SINE B2 -9 186 2 1 1008 274 311 160 64 chr13 55558733 55559015 -64725297 - L1MB8 LINE L1 -1 6177 5869 1 1008 225 0 0 0 chr13 55559016 55559041 -64725271 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 1008 712 95 25 25 chr13 55559045 55559164 -64725148 - B1_Mus1 SINE Alu -6 142 24 1 1008 637 95 17 0 chr13 55559510 55559626 -64724686 + (TG)n Simple_repeat Simple_repeat 2 119 0 1 1008 252 328 0 0 chr13 55559626 55559690 -64724622 - ID4 SINE ID -19 64 1 1 1008 1078 82 0 0 chr13 55562705 55562839 -64721473 + B1_Mus1 SINE Alu 2 135 -13 1 1008 376 252 56 38 chr13 55563353 55563473 -64720839 - B1F2 SINE Alu -20 130 9 1 1008 187 275 148 12 chr13 55563806 55563887 -64720425 - L2b LINE L2 -40 3335 3244 1 1008 180 0 0 0 chr13 55564282 55564302 -64720010 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1008 338 306 92 9 chr13 55564771 55564880 -64719432 + MLT1K LTR MaLR 267 384 -211 1 1008 449 318 71 5 chr13 55567054 55567250 -64717062 - MIRb SINE MIR -8 260 52 1 1008 1091 205 5 40 chr13 55568113 55568337 -64715975 - B3 SINE B2 0 216 1 1 1008 711 158 44 22 chr13 55569146 55569282 -64715030 + B1_Mur2 SINE Alu 10 148 -1 1 1008 361 312 0 9 chr13 55569663 55569773 -64714539 + B1F SINE Alu 1 109 -40 1 1008 368 360 46 13 chr13 55570206 55570358 -64713954 + L1MDa LINE L1 2334 2490 -4143 1 1008 342 0 0 0 chr13 55571301 55571339 -64712973 + (TGG)n Simple_repeat Simple_repeat 3 40 0 1 1008 375 174 95 32 chr13 55571340 55571435 -64712877 + PB1D9 SINE Alu 18 118 -2 1 1009 1040 146 42 31 chr13 55577073 55577264 -64707048 - B2_Mm2 SINE B2 -1 194 2 1 1009 206 62 31 0 chr13 55578058 55578090 -64706222 + (GGA)n Simple_repeat Simple_repeat 1 33 0 1 1009 213 209 0 0 chr13 55578139 55578182 -64706130 + GA-rich Low_complexity Low_complexity 1 43 0 1 1009 1050 191 35 15 chr13 55579531 55579733 -64704579 - B3 SINE B2 -10 206 1 1 1009 229 283 17 0 chr13 55579902 55579962 -64704350 - PB1 SINE Alu -1 126 66 1 1009 258 32 0 0 chr13 55579987 55580018 -64704294 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1009 287 25 25 0 chr13 55580061 55580101 -64704211 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1009 629 191 16 16 chr13 55580865 55580993 -64703319 - B1_Mur1 SINE Alu -21 128 1 1 1009 443 271 74 34 chr13 55580993 55581034 -64703278 - B4 SINE B4 -203 89 43 1 1009 556 289 156 8 chr13 55581061 55581298 -64703014 + B4A SINE B4 3 274 -18 1 1009 405 39 0 0 chr13 55581329 55581380 -64702932 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1009 1175 173 38 19 chr13 55581550 55581762 -64702550 + B3 SINE B2 1 216 0 1 1009 478 150 136 0 chr13 55581819 55581928 -64702384 + B1_Mur3 SINE Alu 1 132 -18 1 1009 213 39 0 0 chr13 55582848 55582874 -64701438 + (CGGGG)n Simple_repeat Simple_repeat 3 28 0 1 1009 216 278 24 16 chr13 55584484 55584603 -64699709 + MIR SINE MIR 55 174 -94 1 1009 359 299 15 22 chr13 55585760 55585897 -64698415 + GA-rich Low_complexity Low_complexity 1 136 0 1 1009 228 135 0 0 chr13 55585906 55585943 -64698369 + (GGA)n Simple_repeat Simple_repeat 3 39 0 1 1009 333 0 0 0 chr13 55587274 55587311 -64697001 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1009 23 78 0 0 chr13 55589017 55589068 -64695244 + GC_rich Low_complexity Low_complexity 1 51 0 1 1009 228 35 0 0 chr13 55589188 55589217 -64695095 + (CGGGGG)n Simple_repeat Simple_repeat 2 30 0 1 1009 29 47 0 0 chr13 55589438 55589481 -64694831 + GC_rich Low_complexity Low_complexity 1 43 0 1 1009 26 50 0 0 chr13 55589521 55589561 -64694751 + GC_rich Low_complexity Low_complexity 1 40 0 1 1009 189 0 0 0 chr13 55590152 55590173 -64694139 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1009 465 19 0 0 chr13 55590447 55590501 -64693811 + (CAGG)n Simple_repeat Simple_repeat 1 54 0 1 1009 1204 50 0 0 chr13 55590892 55591032 -64693280 + B1_Mus1 SINE Alu 1 140 -8 1 1009 1319 97 27 5 chr13 55591336 55591522 -64692790 - B2_Mm2 SINE B2 -1 194 5 1 1009 1187 61 12 6 chr13 55591560 55591725 -64692587 + B2_Mm2 SINE B2 16 181 -14 1 1009 1189 68 0 0 chr13 55591735 55591882 -64692430 - B1_Mus2 SINE Alu 0 147 1 1 1009 1660 42 0 0 chr13 55591910 55592102 -64692210 + B2_Mm1a SINE B2 1 192 -1 1 1009 321 26 0 0 chr13 55592115 55592153 -64692159 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 1 1009 460 254 34 26 chr13 55592161 55592278 -64692034 + PB1D9 SINE Alu 3 120 0 1 1009 228 130 0 0 chr13 55592386 55592432 -64691880 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1009 267 255 167 21 chr13 55592637 55592733 -64691579 - PB1D7 SINE Alu 0 120 11 1 1009 287 302 39 126 chr13 55592852 55592919 -64691393 + B4 SINE B4 65 229 -62 1 1009 640 162 0 26 chr13 55592919 55593033 -64691279 + B1_Mur4 SINE Alu 39 149 -1 1 1009 192 40 0 0 chr13 55593142 55593167 -64691145 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 1009 1578 184 78 9 chr13 55594170 55594489 -64689823 - MTD LTR MaLR 0 419 79 1 1009 518 240 74 0 chr13 55594513 55594634 -64689678 - B1F1 SINE Alu -2 147 18 1 1009 585 96 0 0 chr13 55594767 55594861 -64689451 + (TC)n Simple_repeat Simple_repeat 1 94 0 1 1009 233 75 0 24 chr13 55594908 55594949 -64689363 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 1009 198 128 0 0 chr13 55594950 55594989 -64689323 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1009 209 140 23 23 chr13 55595023 55595067 -64689245 + CT-rich Low_complexity Low_complexity 2 45 0 1 1009 288 0 0 0 chr13 55595068 55595100 -64689212 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1009 222 245 0 19 chr13 55596204 55596258 -64688054 + MIRc SINE MIR 81 133 -135 1 1009 236 100 25 0 chr13 55596259 55596299 -64688013 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 1 1009 560 214 64 7 chr13 55596299 55596440 -64687872 - B1F SINE Alu 0 149 1 1 1009 21 0 0 0 chr13 55596657 55596678 -64687634 + GC_rich Low_complexity Low_complexity 1 21 0 1 1009 22 0 0 0 chr13 55597045 55597067 -64687245 + AT_rich Low_complexity Low_complexity 1 22 0 2 1009 201 108 0 0 chr13 55597084 55597121 -64687191 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1009 317 287 103 32 chr13 55597307 55597433 -64686879 + Charlie8 DNA MER1_type 386 520 -1908 2 1009 208 231 121 15 chr13 55597629 55597695 -64686617 - L2a LINE L2 0 3426 3354 2 1009 853 187 23 28 chr13 55597948 55598124 -64686188 + B3 SINE B2 36 210 -6 2 1009 223 264 97 66 chr13 55598164 55598283 -64686029 + MIRb SINE MIR 18 147 -121 2 1009 448 261 29 6 chr13 55598294 55598468 -64685844 + ID_B1 SINE B4 3 224 0 2 1009 825 47 0 0 chr13 55598466 55598572 -64685740 + B1_Mus2 SINE Alu 33 138 -9 2 1009 323 60 0 20 chr13 55598602 55598653 -64685659 + (CAAAC)n Simple_repeat Simple_repeat 2 51 0 2 1009 722 242 21 57 chr13 55598697 55598996 -64685316 + B1_Mur4 SINE Alu 8 288 -23 2 1009 682 252 34 53 chr13 55598996 55599205 -64685107 + B3 SINE B2 4 208 -8 2 1009 228 315 51 73 chr13 55599205 55599227 -64685085 + FAM SINE Alu 289 310 -1 2 1009 306 0 0 0 chr13 55600823 55600857 -64683455 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1009 208 222 117 65 chr13 55600945 55601022 -64683290 + L2 LINE L2 2567 2647 -772 2 1009 273 301 0 14 chr13 55601732 55601806 -64682506 - ID4_ SINE ID -1 82 10 2 1009 670 67 48 0 chr13 55602299 55602403 -64681909 + B1_Mus2 SINE Alu 34 142 -5 2 1009 218 134 14 43 chr13 55602404 55602474 -64681838 + (TGAA)n Simple_repeat Simple_repeat 1 68 0 2 1009 359 321 179 0 chr13 55602490 55602658 -64681654 + B3A SINE B2 1 198 0 2 1009 680 274 125 12 chr13 55602930 55603178 -64681134 + MLT1J LTR MaLR 87 362 -150 2 1009 1217 68 0 0 chr13 55603370 55603517 -64680795 - B1_Mus1 SINE Alu -1 147 1 2 1009 669 317 116 4 chr13 55604065 55604290 -64680022 + MER2 DNA MER2_type 77 326 -19 2 1009 494 313 129 60 chr13 55604791 55605124 -64679188 + MLT1K LTR MaLR 140 495 -100 2 1009 695 195 235 6 chr13 55605160 55605330 -64678982 + B3 SINE B2 2 210 -6 2 1009 1016 144 0 0 chr13 55605403 55605549 -64678763 + B1_Mur4 SINE Alu 5 150 0 2 1009 252 271 98 25 chr13 55605579 55605681 -64678631 - B1F SINE Alu -11 109 4 2 1009 365 305 92 7 chr13 55605681 55605756 -64678556 - ID_B1 SINE B4 -134 90 4 2 1009 306 280 0 41 chr13 55605887 55606010 -64678302 + (CCTG)n Simple_repeat Simple_repeat 3 120 0 2 1009 1018 203 15 30 chr13 55606882 55607085 -64677227 + B3 SINE B2 1 200 -16 2 1009 240 214 0 0 chr13 55607085 55607141 -64677171 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1009 276 172 0 0 chr13 55608526 55608584 -64675728 + GA-rich Low_complexity Low_complexity 1 58 0 2 1009 200 182 0 0 chr13 55609250 55609283 -64675029 + (CAGA)n Simple_repeat Simple_repeat 2 34 0 2 1009 180 111 0 0 chr13 55609935 55609962 -64674350 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 2 1009 185 316 123 41 chr13 55611262 55611384 -64672928 - MIRb SINE MIR -79 189 58 2 1009 431 259 57 101 chr13 55611431 55611472 -64672840 + B4 SINE B4 73 220 -68 2 1009 702 175 0 0 chr13 55611472 55611586 -64672726 + B1_Mur4 SINE Alu 31 144 -6 2 1009 236 243 84 14 chr13 55611642 55611713 -64672599 + PB1D10 SINE Alu 2 77 -40 2 1009 260 197 40 66 chr13 55615234 55615310 -64669002 + ID2 SINE ID 1 74 -9 2 1009 558 122 0 43 chr13 55615749 55615843 -64668469 + B1_Mus2 SINE Alu 52 141 -6 2 1009 259 215 0 112 chr13 55615763 55615852 -64668460 + ID_B1 SINE B4 146 224 0 2 1009 425 253 22 0 chr13 55616110 55616201 -64668111 + B3 SINE B2 117 209 -7 2 1009 285 329 68 49 chr13 55616780 55616943 -64667369 + L2a LINE L2 2727 2892 -527 2 1009 364 266 61 44 chr13 55616976 55617090 -64667222 + PB1D10 SINE Alu 2 117 0 2 1009 212 260 0 0 chr13 55617095 55617145 -64667167 + A-rich Low_complexity Low_complexity 2 51 0 2 1009 205 303 80 35 chr13 55617221 55617334 -64666978 + L2a LINE L2 2957 3074 -352 2 1009 1102 107 0 23 chr13 55617335 55617508 -64666804 - B2_Mm2 SINE B2 0 195 27 2 1009 823 105 15 0 chr13 55617508 55617641 -64666671 + (TTC)n Simple_repeat Simple_repeat 2 136 0 2 1009 1126 88 0 0 chr13 55617651 55617798 -64666514 - B1_Mus2 SINE Alu 0 147 1 2 1009 309 25 0 0 chr13 55617798 55617838 -64666474 - B2_Mm2 SINE B2 -154 41 2 2 1009 1124 183 45 15 chr13 55617950 55618150 -64666162 + B3 SINE B2 5 210 -6 2 1009 226 269 20 79 chr13 55618165 55618266 -64666046 + L2a LINE L2 3167 3261 -165 2 1009 1116 114 13 6 chr13 55618654 55618845 -64665467 - B2_Mm1a SINE B2 0 216 23 2 1009 223 204 20 0 chr13 55618843 55618892 -64665420 - ID4 SINE ID -32 51 2 2 1009 412 319 8 0 chr13 55619412 55619531 -64664781 + (TG)n Simple_repeat Simple_repeat 2 121 0 2 1009 522 292 63 23 chr13 55619532 55619707 -64664605 - B3A SINE B2 -16 182 1 2 1009 596 221 50 79 chr13 55619787 55619989 -64664323 + B3A SINE B2 3 198 0 2 1009 857 139 29 0 chr13 55619996 55620133 -64664179 + B1_Mus1 SINE Alu 6 146 -2 2 1009 728 226 7 27 chr13 55620220 55620370 -64663942 - B1_Mur3 SINE Alu 0 149 3 2 1009 1621 16 27 0 chr13 55620382 55620567 -64663745 - B2_Mm1a SINE B2 -3 190 1 2 1009 230 0 33 0 chr13 55620712 55620742 -64663570 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1009 1513 77 0 5 chr13 55621316 55621511 -64662801 + B2_Mm2 SINE B2 2 195 0 2 1009 243 0 0 0 chr13 55621549 55621576 -64662736 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2 1009 2017 195 11 13 chr13 55621790 55622165 -64662147 - ORR1D1 LTR MaLR 0 374 1 2 1009 319 333 99 52 chr13 55622776 55622805 -64661507 - B4 SINE B4 0 292 270 2 1009 221 0 0 33 chr13 55622805 55622835 -64661477 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1009 319 333 99 52 chr13 55622835 55623017 -64661295 - B4 SINE B4 -23 269 71 2 1009 1244 61 0 0 chr13 55623112 55623260 -64661052 - B1_Mus1 SINE Alu 0 148 1 2 1009 357 240 9 63 chr13 55623260 55623407 -64660905 - B3 SINE B2 -16 200 1 2 1009 496 234 19 0 chr13 55623507 55623614 -64660698 - B1_Mur1 SINE Alu -5 144 36 2 1009 420 326 50 30 chr13 55623614 55623708 -64660604 - ID_B1 SINE B4 -4 219 15 2 1009 223 345 0 22 chr13 55623628 55623717 -64660595 - BC1_Mm scRNA scRNA -58 94 8 2 1009 1238 125 10 10 chr13 55623729 55623764 -64660548 - B2_Mm2 SINE B2 0 195 159 2 1009 201 74 0 0 chr13 55623764 55623791 -64660521 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 2 1009 1238 125 10 10 chr13 55623791 55623949 -64660363 - B2_Mm2 SINE B2 -37 158 2 2 1009 301 212 140 10 chr13 55626392 55626461 -64657851 - L1MEe LINE L1 -4034 820 741 2 1009 1165 75 7 0 chr13 55626461 55626608 -64657704 - B1_Mus1 SINE Alu 0 148 1 2 1009 301 212 140 10 chr13 55626608 55626638 -64657674 - L1MEe LINE L1 -4114 740 708 2 1009 952 127 0 47 chr13 55626639 55626788 -64657524 - B1_Mus1 SINE Alu -6 142 1 2 1009 686 179 96 15 chr13 55626845 55626981 -64657331 + B1_Mus1 SINE Alu 1 147 -1 2 1009 768 186 0 0 chr13 55627044 55627173 -64657139 - B3 SINE B2 -86 130 2 2 1009 294 336 25 0 chr13 55627182 55627301 -64657011 - L1MB5 LINE L1 -40 6134 6013 2 1009 462 143 248 9 chr13 55627460 55627573 -64656739 - B1F2 SINE Alu -8 141 2 2 1009 198 0 0 0 chr13 55627740 55627762 -64656550 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1009 1236 41 7 0 chr13 55627764 55627910 -64656402 - B1_Mus2 SINE Alu 0 147 1 2 1009 942 166 132 6 chr13 55627940 55628122 -64656190 - B3 SINE B2 -8 208 4 2 1009 204 246 40 40 chr13 55628328 55628404 -64655908 + L2b LINE L2 2973 3048 -327 2 1009 249 281 24 24 chr13 55630320 55630404 -64653908 - BC1_Mm scRNA scRNA -64 88 5 2 1009 265 299 26 0 chr13 55631060 55631137 -64653175 - MIRc SINE MIR -112 156 78 2 1009 287 266 88 50 chr13 55632299 55632537 -64651775 - RMER1C Other Other -504 838 592 2 1009 919 179 158 5 chr13 55633850 55634046 -64650266 + URR1A DNA MER1_type 1 226 0 2 1009 1167 89 0 0 chr13 55634052 55634198 -64650114 + B1_Mus2 SINE Alu 2 147 0 2 1009 234 0 0 0 chr13 55634198 55634224 -64650088 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1009 1122 52 0 0 chr13 55636060 55636195 -64648117 + B1_Mus1 SINE Alu 2 136 -12 2 1009 207 0 0 0 chr13 55636195 55636218 -64648094 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 1009 365 338 23 0 chr13 55636233 55636366 -64647946 + B1_Mus1 SINE Alu 5 140 -8 2 1009 326 259 33 115 chr13 55636375 55636497 -64647815 + PB1D7 SINE Alu 5 116 -4 2 1009 515 221 34 42 chr13 55638640 55638758 -64645554 - PB1D7 SINE Alu -2 118 2 2 1009 437 223 155 0 chr13 55638840 55638943 -64645369 + PB1D9 SINE Alu 1 119 -1 2 1009 729 199 188 0 chr13 55639296 55639472 -64644840 + B3 SINE B2 2 210 -6 2 1009 248 310 78 20 chr13 55639850 55639952 -64644360 + MTEa LTR MaLR 65 172 -207 2 1009 964 69 123 0 chr13 55640069 55640199 -64644113 - B1_Mus1 SINE Alu 0 148 3 2 1009 410 141 56 0 chr13 55640219 55640290 -64644022 + B3 SINE B2 2 76 -140 2 1009 685 174 80 19 chr13 55642196 55642380 -64641932 + B3 SINE B2 1 188 -7 2 1009 681 177 40 0 chr13 55642381 55642505 -64641807 + B2_Mm2 SINE B2 1 129 -66 2 1009 197 338 58 29 chr13 55643464 55643601 -64640711 + L2c LINE L2 3108 3248 -139 2 1009 315 219 164 0 chr13 55643659 55643732 -64640580 + B1_Mur2 SINE Alu 27 111 -38 2 1009 208 342 66 33 chr13 55646493 55646614 -64637698 - MIRb SINE MIR -73 195 71 2 1009 186 392 57 16 chr13 55646666 55646788 -64637524 - L2c LINE L2 -38 3349 3223 2 1009 519 279 91 15 chr13 55647232 55647445 -64636867 - MIRb SINE MIR -19 249 9 3 1009 541 317 14 0 chr13 55650915 55651060 -64633252 + MIRb SINE MIR 28 174 -94 3 1009 302 295 10 10 chr13 55653000 55653096 -64631216 - PB1D10 SINE Alu -19 98 3 3 1009 881 167 21 0 chr13 55653577 55653721 -64630591 + B1_Mus2 SINE Alu 1 147 0 3 1009 312 262 79 61 chr13 55653858 55653972 -64630340 + PB1D10 SINE Alu 2 117 0 3 1009 192 163 0 0 chr13 55655709 55655752 -64628560 + GA-rich Low_complexity Low_complexity 3 45 0 3 1009 1048 171 119 5 chr13 55656103 55656297 -64628015 - B3 SINE B2 0 216 1 3 1009 829 166 0 0 chr13 55656329 55656468 -64627844 - B1_Mur4 SINE Alu -6 144 6 3 1009 477 323 77 55 chr13 55656549 55656821 -64627491 - B4 SINE B4 -13 279 2 3 1009 321 308 44 0 chr13 55656824 55656915 -64627397 - BC1_Mm scRNA scRNA -57 95 1 3 1009 643 281 74 39 chr13 55657637 55657867 -64626445 - MIRb SINE MIR -3 265 28 3 1009 182 307 67 38 chr13 55657963 55658068 -64626244 + L3 LINE CR1 4332 4439 -50 3 1009 276 339 35 0 chr13 55658126 55658241 -64626071 + MIRb SINE MIR 18 136 -132 3 1009 332 277 96 48 chr13 55658598 55658765 -64625547 + MLT1H LTR MaLR 369 543 -6 3 1009 544 226 168 0 chr13 55659199 55659336 -64624976 - RSINE1 SINE B4 -4 161 2 3 1009 679 234 7 0 chr13 55659586 55659723 -64624589 - ID_B1 SINE B4 0 224 87 3 1009 503 202 40 56 chr13 55659913 55660039 -64624273 - B1_Mur1 SINE Alu -2 147 24 3 1009 301 315 50 95 chr13 55660039 55660092 -64624220 - B4 SINE B4 -69 223 53 3 1009 1079 228 5 10 chr13 55660131 55660339 -64623973 + B3 SINE B2 1 207 -9 3 1009 331 309 0 0 chr13 55660766 55660847 -64623465 - PB1D7 SINE Alu -39 81 1 3 1009 311 210 107 9 chr13 55661049 55661133 -64623179 - B1_Mur2 SINE Alu -37 112 33 3 1009 622 218 0 66 chr13 55661824 55661976 -64622336 + B1_Mus2 SINE Alu 5 146 -1 3 1009 267 329 58 112 chr13 55661846 55662034 -64622278 + B4A SINE B4 107 284 -8 3 1009 465 235 41 0 chr13 55661996 55662094 -64622218 - B1F1 SINE Alu -47 102 1 3 1009 565 244 158 18 chr13 55662139 55662310 -64622002 - B3A SINE B2 0 198 4 3 1009 201 345 0 0 chr13 55662330 55662385 -64621927 + (CGTG)n Simple_repeat Simple_repeat 4 58 0 3 1009 565 301 26 0 chr13 55662387 55662540 -64621772 - RSINE1 SINE B4 -6 159 3 3 1009 470 253 100 42 chr13 55663188 55663377 -64620935 + Charlie1a DNA MER1_type 457 656 -799 3 1009 527 221 38 17 chr13 55663377 55663520 -64620792 + PB1D7 SINE Alu 1 138 -11 3 1009 262 254 101 54 chr13 55663484 55663613 -64620699 + Charlie1a DNA MER1_type 633 767 -688 3 1009 560 189 131 0 chr13 55663711 55663833 -64620479 - B1_Mur1 SINE Alu -5 144 7 3 1009 306 299 115 36 chr13 55663833 55663848 -64620464 - ID_B1 SINE B4 -3 219 72 3 1009 543 287 42 0 chr13 55664171 55664314 -64619998 - RSINE1 SINE B4 -15 150 2 3 1009 1184 28 0 58 chr13 55664437 55664591 -64619721 - B1_Mus1 SINE Alu -2 146 2 3 1009 655 272 96 9 chr13 55665706 55665925 -64618387 + MIRb SINE MIR 23 260 -8 3 1009 690 218 14 36 chr13 55666488 55666626 -64617686 - B1_Mur1 SINE Alu -13 136 2 3 1009 861 193 166 0 chr13 55666811 55666992 -64617320 - B3 SINE B2 -4 212 2 3 1009 253 325 26 0 chr13 55667000 55667077 -64617235 - ID2 SINE ID 0 83 5 3 1009 1164 139 47 19 chr13 55667456 55667669 -64616643 + URR1A DNA MER1_type 2 220 -6 3 1009 583 248 0 41 chr13 55669277 55669399 -64614913 - B1F SINE Alu -28 121 5 3 1009 321 26 0 0 chr13 55669435 55669473 -64614839 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1009 1576 47 16 0 chr13 55670105 55670295 -64614017 + B2_Mm2 SINE B2 2 194 -1 3 1009 346 261 103 19 chr13 55670880 55671036 -64613276 - L2c LINE L2 -78 3309 3141 3 1009 35 24 0 0 chr13 55672281 55672323 -64611989 + GC_rich Low_complexity Low_complexity 1 42 0 3 1009 399 21 0 0 chr13 55672389 55672437 -64611875 + (CCG)n Simple_repeat Simple_repeat 3 50 0 3 1009 387 0 0 0 chr13 55673931 55673974 -64610338 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1009 2644 67 64 3 chr13 55673998 55674356 -64609956 + MTB LTR MaLR 15 394 -6 3 1009 1461 56 39 0 chr13 55674360 55674540 -64609772 - B2_Mm2 SINE B2 -6 189 3 3 1009 223 170 0 0 chr13 55674549 55674596 -64609716 + T-rich Low_complexity Low_complexity 1 47 0 3 1009 1229 55 0 14 chr13 55674597 55674745 -64609567 - B1_Mm SINE Alu 0 147 2 3 1009 461 162 130 10 chr13 55674745 55674845 -64609467 - RLTR20A LTR ERVK -429 112 1 3 1009 256 284 23 0 chr13 55674845 55674933 -64609379 + MYSERV-int LTR ERVK 6457 6546 -4 3 1009 523 262 141 97 chr13 55674944 55675233 -64609079 + RLTR12B LTR ERVK 11 318 -250 3 1009 773 262 76 49 chr13 55675245 55675574 -64608738 + RLTR15 LTR ERVK 1 338 -21 3 1009 183 139 0 0 chr13 55675824 55675860 -64608452 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1009 823 113 113 0 chr13 55675972 55676105 -64608207 + B2_Mm2 SINE B2 1 148 -47 3 1009 288 0 0 0 chr13 55676105 55676137 -64608175 + (TA)n Simple_repeat Simple_repeat 1 32 0 3 1009 283 327 52 57 chr13 55676442 55676653 -64607659 + RLTR12B LTR ERVK 292 501 -27 3 1009 3540 206 60 51 chr13 55676852 55677680 -64606632 - RMER21A LTR ERV1 0 947 112 3 1009 249 33 0 0 chr13 55677681 55677711 -64606601 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 3 1009 1067 112 0 0 chr13 55677713 55677856 -64606456 - B1_Mus1 SINE Alu -5 143 1 3 1009 1963 109 0 66 chr13 55677928 55678231 -64606081 + ORR1A2 LTR MaLR 7 289 -38 3 1009 1219 55 7 0 chr13 55678231 55678377 -64605935 + B1_Mm SINE Alu 1 147 0 3 1009 234 0 0 0 chr13 55678377 55678403 -64605909 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1009 389 109 0 0 chr13 55678403 55678458 -64605854 + ORR1A2 LTR MaLR 272 326 0 3 1009 329 217 113 73 chr13 55678521 55678645 -64605667 + RMER2 LTR ERV1 439 567 0 3 1009 507 267 82 75 chr13 55678645 55678888 -64605424 - RLTR11A2 LTR ERVK -272 255 11 3 1009 2593 116 32 49 chr13 55678892 55679363 -64604949 - MurERV4-int LTR ERVK -1686 3574 3112 3 1009 2575 229 52 31 chr13 55679369 55680037 -64604275 - MurERV4-int LTR ERVK -4578 682 1 3 1009 564 157 164 9 chr13 55680039 55680155 -64604157 - RMER4B LTR ERVK -13 572 439 3 1009 437 103 74 37 chr13 55680134 55680215 -64604097 - RMER4B LTR ERVK -443 142 59 3 1009 826 167 49 49 chr13 55680235 55680399 -64603913 + B2_Mm2 SINE B2 17 180 -15 3 1009 474 18 0 0 chr13 55680419 55680474 -64603838 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1009 619 168 63 16 chr13 55680505 55680632 -64603680 - B1_Mur2 SINE Alu -15 134 2 3 1009 393 70 53 53 chr13 55680638 55680714 -64603598 + B1_Mus2 SINE Alu 71 146 -1 3 1009 209 122 24 0 chr13 55680714 55680755 -64603557 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 3 1009 1233 61 0 0 chr13 55680773 55680920 -64603392 + B1_Mm SINE Alu 1 147 0 3 1009 289 281 79 0 chr13 55681158 55681247 -64603065 - MLT1J2 LTR MaLR 0 448 353 3 1009 2059 146 44 7 chr13 55681360 55681786 -64602526 + ORR1A1 LTR MaLR 1 337 -9 3 1009 662 212 27 87 chr13 55682003 55682153 -64602159 + B1_Mus1 SINE Alu 3 143 -5 3 1009 381 217 119 37 chr13 55682177 55682311 -64602001 - L1ME1 LINE L1 -265 5914 5770 3 1009 222 150 0 0 chr13 55682417 55682457 -64601855 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1009 216 255 0 0 chr13 55682490 55682537 -64601775 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1009 252 0 0 0 chr13 55682705 55682733 -64601579 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1009 1134 93 0 0 chr13 55682733 55682873 -64601439 - B1_Mus1 SINE Alu -8 140 1 3 1009 2279 82 3 59 chr13 55682876 55683111 -64601201 - ORR1A2 LTR MaLR -8 319 84 3 1009 2690 99 53 22 chr13 55683111 55683523 -64600789 + Lx LINE L1 6225 6649 -5 3 1009 2279 82 3 59 chr13 55683523 55683625 -64600687 - ORR1A2 LTR MaLR -244 83 1 3 1009 401 300 156 47 chr13 55683766 55684067 -64600245 - RMER20A LTR ERVK -48 468 135 3 1009 653 252 47 92 chr13 55684563 55684976 -64599336 - RLTR15 LTR ERVK -81 278 9 3 1009 515 191 227 0 chr13 55685000 55685109 -64599203 + URR1B DNA MER1_type 1 134 -91 3 1009 3654 164 90 6 chr13 55685109 55685784 -64598528 + RMER19B LTR ERVK 1 732 -170 3 1009 1210 35 7 20 chr13 55685815 55685963 -64598349 + B1_Mus2 SINE Alu 2 147 0 3 1009 186 43 0 0 chr13 55685968 55685991 -64598321 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1009 1343 155 30 17 chr13 55685992 55686222 -64598090 - RMER19B LTR ERVK -31 871 639 3 1009 907 133 101 43 chr13 55686235 55686423 -64597889 - RLTR20A2 LTR ERVK -332 246 48 3 1009 249 261 72 0 chr13 55686641 55686710 -64597602 - B1F SINE Alu -54 95 22 3 1009 1629 37 0 0 chr13 55686802 55686989 -64597323 + B2_Mm1a SINE B2 2 188 -5 3 1009 1028 136 0 0 chr13 55687112 55687259 -64597053 - B1_Mur3 SINE Alu -2 147 1 3 1009 1058 234 5 0 chr13 55687370 55687579 -64596733 + B3 SINE B2 1 210 -6 3 1009 616 186 20 0 chr13 55687643 55687745 -64596567 - PB1 SINE Alu -11 116 13 3 1009 649 285 7 0 chr13 55687852 55687996 -64596316 + RSINE1 SINE B4 6 150 -15 3 1009 222 322 64 58 chr13 55687996 55688040 -64596272 + B2_Mm2 SINE B2 5 193 -2 3 1009 1147 82 6 6 chr13 55688105 55688264 -64596048 + B2_Mm2 SINE B2 1 159 -36 3 1009 210 208 0 0 chr13 55688455 55688503 -64595809 + T-rich Low_complexity Low_complexity 1 48 0 3 1009 1663 42 0 0 chr13 55688503 55688696 -64595616 - B2_Mm1a SINE B2 0 193 1 3 1009 1245 48 0 20 chr13 55688787 55688937 -64595375 + B1_Mus1 SINE Alu 2 148 0 3 1009 408 244 140 6 chr13 55688943 55689100 -64595212 - L1MB3 LINE L1 -63 6108 5931 3 1009 203 200 27 44 chr13 55689137 55689320 -64594992 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 4 1009 271 233 26 7 chr13 55689356 55689507 -64594805 + (TATATG)n Simple_repeat Simple_repeat 1 154 0 4 1009 592 219 20 13 chr13 55689507 55689660 -64594652 - L1MB3 LINE L1 -270 5913 5760 3 1009 1258 90 51 0 chr13 55689681 55689858 -64594454 + B2_Mm2 SINE B2 1 186 -9 4 1009 1171 220 0 0 chr13 55689870 55690079 -64594233 - B3 SINE B2 -7 209 1 4 1009 417 306 76 84 chr13 55690103 55690460 -64593852 - ORR1E LTR MaLR -2 357 4 4 1009 593 185 0 0 chr13 55690568 55690660 -64593652 - B1_Mus2 SINE Alu -22 125 34 4 1009 45 45 0 0 chr13 55690676 55690742 -64593570 + AT_rich Low_complexity Low_complexity 1 66 0 4 1009 601 40 0 0 chr13 55690742 55690816 -64593496 - B1_Mur4 SINE Alu 0 150 77 4 1009 6217 48 5 1 chr13 55690816 55691616 -64592696 - L1_Mm LINE L1 -797 5086 4284 4 1009 5164 50 0 1 chr13 55691614 55692280 -64592032 + L1_Mm LINE L1 3619 4284 -1599 4 1009 510 17 0 0 chr13 55692280 55692339 -64591973 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 4 1009 719 97 114 61 chr13 55692350 55692482 -64591830 - B2_Mm2 SINE B2 -55 140 2 4 1009 386 154 0 44 chr13 55693217 55693285 -64591027 + B1_Mur4 SINE Alu 25 89 -61 4 1009 1660 141 80 21 chr13 55693284 55693701 -64590611 - RMER17C LTR ERVK -517 441 16 4 1009 349 200 27 0 chr13 55693694 55693769 -64590543 + B1_Mur1 SINE Alu 73 149 0 4 1009 462 284 94 15 chr13 55693817 55694045 -64590267 + L1M4c LINE L1 2305 2555 -3827 4 1009 299 329 56 28 chr13 55694052 55694196 -64590116 + B1_Mur1 SINE Alu 2 149 0 4 1009 699 137 68 68 chr13 55695448 55695581 -64588731 + B1_Mur4 SINE Alu 14 146 -2 4 1009 1177 42 42 0 chr13 55695618 55695760 -64588552 + B1_Mus1 SINE Alu 1 148 0 4 1009 395 295 115 43 chr13 55696380 55696589 -64587723 - MER2 DNA MER2_type -96 249 26 4 1009 28 0 0 26 chr13 55697425 55697448 -64586864 + AT_rich Low_complexity Low_complexity 1 23 0 4 1009 1129 102 0 0 chr13 55697448 55697595 -64586717 - B1_Mm SINE Alu 0 147 1 4 1009 28 0 0 26 chr13 55697595 55697610 -64586702 + AT_rich Low_complexity Low_complexity 1 15 0 4 1009 189 0 0 0 chr13 55697610 55697631 -64586681 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 4 1009 665 177 84 84 chr13 55697631 55697773 -64586539 - B1_Mur4 SINE Alu -7 143 2 4 1009 201 176 0 0 chr13 55699024 55699058 -64585254 + A-rich Low_complexity Low_complexity 1 34 0 4 1009 1423 99 16 0 chr13 55699072 55699263 -64585049 - B2_Mm2 SINE B2 0 195 2 4 1009 916 150 7 20 chr13 55699317 55699467 -64584845 + B1_Mur3 SINE Alu 2 149 0 4 1009 1204 54 0 13 chr13 55699688 55699837 -64584475 - B1_Mm SINE Alu 0 147 1 4 1009 1300 69 26 31 chr13 55699983 55700177 -64584135 + B2_Mm2 SINE B2 3 195 0 4 1009 346 263 150 21 chr13 55700398 55700494 -64583818 + MIR SINE MIR 105 218 -44 4 1009 1028 79 139 46 chr13 55700494 55700667 -64583645 + B2_Mm2 SINE B2 1 189 -6 4 1009 346 263 150 21 chr13 55700667 55700710 -64583602 + MIR SINE MIR 219 261 -1 4 1009 182 316 203 0 chr13 55700864 55701041 -64583271 - MIR SINE MIR -9 253 41 4 1009 22 0 0 0 chr13 55701405 55701427 -64582885 + GC_rich Low_complexity Low_complexity 1 22 0 4 1009 881 165 235 6 chr13 55701820 55702003 -64582309 + URR1A DNA MER1_type 1 225 -1 4 1009 207 0 0 0 chr13 55702105 55702128 -64582184 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 1009 553 163 326 0 chr13 55702478 55702607 -64581705 + URR1A DNA MER1_type 1 171 -55 4 1009 207 139 0 0 chr13 55702707 55702743 -64581569 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1009 264 231 46 0 chr13 55702809 55702874 -64581438 + MIRb SINE MIR 108 175 -93 4 1009 1230 41 7 0 chr13 55703311 55703457 -64580855 - B1_Mus2 SINE Alu 0 147 1 4 1009 311 188 31 15 chr13 55704619 55704684 -64579628 - PB1D10 SINE Alu 0 117 52 4 1010 284 232 0 18 chr13 55706286 55706343 -64577969 + RSINE1 SINE B4 73 128 -37 4 1010 1203 50 0 0 chr13 55706396 55706535 -64577777 + B1_Mus2 SINE Alu 1 139 -8 4 1010 775 122 137 0 chr13 55706564 55706695 -64577617 + B1_Mur3 SINE Alu 1 149 0 4 1010 185 167 19 0 chr13 55706826 55706880 -64577432 + CT-rich Low_complexity Low_complexity 1 55 0 4 1010 306 148 0 0 chr13 55706871 55706925 -64577387 + (TCC)n Simple_repeat Simple_repeat 2 55 0 4 1010 1398 73 5 30 chr13 55706937 55707134 -64577178 - B2_Mm1a SINE B2 0 193 2 4 1010 754 179 0 7 chr13 55707139 55707274 -64577038 - B1_Mur4 SINE Alu 0 150 17 4 1010 300 91 0 0 chr13 55707275 55707319 -64576993 + (CCA)n Simple_repeat Simple_repeat 1 44 0 4 1010 1187 75 0 0 chr13 55707343 55707490 -64576822 + B1_Mus2 SINE Alu 1 147 0 4 1010 522 306 142 23 chr13 55707830 55708091 -64576221 + L2 LINE L2 2422 2713 -706 4 1010 1505 38 43 0 chr13 55711279 55711465 -64572847 - B2_Mm2 SINE B2 0 195 2 4 1010 256 277 40 69 chr13 55711466 55711567 -64572745 - MER102b DNA MER1_type -200 141 44 4 1010 1089 76 14 0 chr13 55711576 55711721 -64572591 - B1_Mus1 SINE Alu -1 147 1 4 1010 454 223 0 118 chr13 55711619 55711746 -64572566 - MT2B LTR ERVL -345 256 145 4 1010 1125 83 7 0 chr13 55712357 55712502 -64571810 - B1_Mus2 SINE Alu 0 147 2 4 1010 1819 147 216 86 chr13 55713458 55713817 -64570495 - MT2A LTR ERVL -11 522 86 4 1010 959 126 28 0 chr13 55713817 55713960 -64570352 + B1_Mus1 SINE Alu 2 148 0 4 1010 1819 147 216 86 chr13 55713960 55714054 -64570258 - MT2A LTR ERVL -448 85 10 4 1010 753 162 80 14 chr13 55714717 55714855 -64569457 + B1_Mus2 SINE Alu 1 147 0 4 1010 743 225 14 0 chr13 55715204 55715342 -64568970 + B1_Mur2 SINE Alu 1 140 -9 4 1010 243 108 0 0 chr13 55715380 55715417 -64568895 - Lx8 LINE L1 0 7473 7437 4 1010 2284 276 177 53 chr13 55715427 55715458 -64568854 - Lx8 LINE L1 -96 7377 7350 4 1010 1157 68 0 7 chr13 55715458 55715606 -64568706 - B1_Mm SINE Alu 0 147 1 4 1010 2284 276 177 53 chr13 55715606 55715983 -64568329 - Lx8 LINE L1 -124 7349 6889 4 1010 189 0 0 0 chr13 55715983 55716004 -64568308 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 1010 1129 72 0 0 chr13 55716009 55716147 -64568165 - B1_Mus2 SINE Alu -7 140 3 4 1010 2284 276 177 53 chr13 55716147 55716856 -64567456 - Lx8 LINE L1 -585 6888 6114 4 1010 904 152 7 0 chr13 55717014 55717152 -64567160 - B1_Mur4 SINE Alu -1 149 11 4 1010 350 245 0 124 chr13 55717057 55717178 -64567134 - MT2B LTR ERVL -344 257 152 4 1010 2203 158 30 74 chr13 55717267 55717710 -64566602 - MTC LTR MaLR -14 407 1 4 1010 1147 191 16 201 chr13 55717892 55718266 -64566046 + ORR1D1 LTR MaLR 1 305 -69 4 1010 369 186 30 15 chr13 55718306 55718437 -64565875 + (TA)n Simple_repeat Simple_repeat 2 134 0 4 1010 280 146 0 40 chr13 55718439 55718489 -64565823 + ORR1D1 LTR MaLR 327 374 0 4 1010 486 235 5 16 chr13 55718489 55718630 -64565682 - Lx8 LINE L1 -324 5832 5671 4 1010 1410 149 9 5 chr13 55718643 55718858 -64565454 - B3 SINE B2 0 216 1 4 1010 766 134 59 0 chr13 55718888 55719007 -64565305 + B3 SINE B2 5 130 -86 4 1010 426 247 297 7 chr13 55719224 55719379 -64564933 + B3 SINE B2 4 203 -13 4 1010 1207 48 14 0 chr13 55719520 55719665 -64564647 + B1_Mus2 SINE Alu 1 147 0 4 1010 228 77 58 0 chr13 55719665 55719717 -64564595 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 4 1010 349 331 37 8 chr13 55720511 55720645 -64563667 + RMER15 LTR ERVL 422 559 -16 4 1010 385 284 10 50 chr13 55720673 55720773 -64563539 - PB1D10 SINE Alu -21 96 1 4 1010 676 87 22 80 chr13 55721065 55721203 -64563109 - L1Md_F2 LINE L1 -1 6581 6452 4 1010 1394 80 37 5 chr13 55721316 55721504 -64562808 - B2_Mm2 SINE B2 -1 194 1 4 1010 900 141 7 21 chr13 55721507 55721652 -64562660 - B1_Mus1 SINE Alu 0 148 6 4 1010 860 191 56 0 chr13 55721687 55721849 -64562463 + B3 SINE B2 1 171 -45 4 1010 509 231 37 9 chr13 55721829 55721938 -64562374 + B1F2 SINE Alu 28 139 -10 4 1010 249 136 91 0 chr13 55722076 55722120 -64562192 + B1_Mur2 SINE Alu 80 127 -22 4 1010 410 0 20 0 chr13 55722129 55722179 -64562133 + (GA)n Simple_repeat Simple_repeat 2 52 0 4 1010 487 247 0 10 chr13 55722202 55722300 -64562012 + B3A SINE B2 8 104 -94 4 1010 312 27 0 0 chr13 55722301 55722338 -64561974 + (TATG)n Simple_repeat Simple_repeat 4 40 0 4 1010 1409 207 45 29 chr13 55722347 55722655 -64561657 + ORR1C2 LTR MaLR 72 384 0 4 1010 741 122 0 0 chr13 55722802 55722917 -64561395 + (TTCC)n Simple_repeat Simple_repeat 2 116 0 4 1010 660 226 44 0 chr13 55722920 55723057 -64561255 - B1_Mur2 SINE Alu -6 143 1 4 1010 1220 48 7 0 chr13 55723614 55723760 -64560552 + B1_Mus1 SINE Alu 2 148 0 4 1010 639 239 17 207 chr13 55727101 55727194 -64557118 - B3 SINE B2 0 216 128 4 1010 1109 57 35 0 chr13 55727194 55727335 -64556977 + B1_Mus1 SINE Alu 2 147 -1 4 1010 639 239 17 207 chr13 55727335 55727473 -64556839 - B3 SINE B2 -89 127 29 4 1010 967 122 13 20 chr13 55727595 55727745 -64556567 + B1_Mur3 SINE Alu 1 149 0 4 1010 261 0 0 0 chr13 55727938 55727967 -64556345 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1010 1179 49 7 0 chr13 55727967 55728111 -64556201 - B1_Mus2 SINE Alu -2 145 1 4 1010 932 218 19 14 chr13 55728143 55728352 -64555960 - B3 SINE B2 -6 210 1 4 1010 863 187 27 5 chr13 55728566 55728744 -64555568 - B3 SINE B2 0 193 1 4 1010 216 0 0 0 chr13 55728877 55728901 -64555411 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1010 229 122 73 0 chr13 55728907 55728948 -64555364 + L1MC LINE L1 2874 2917 -3229 4 1010 1611 43 0 0 chr13 55728956 55729143 -64555169 - B2_Mm1a SINE B2 -5 188 2 4 1010 1188 61 0 0 chr13 55729185 55729332 -64554980 + B1_Mus2 SINE Alu 1 147 0 4 1010 231 217 117 0 chr13 55729361 55729421 -64554891 + 4.5SRNA scRNA scRNA 12 78 -16 4 1010 418 202 0 92 chr13 55729369 55729430 -64554882 + PB1D10 SINE Alu 29 84 -33 4 1010 1363 136 37 0 chr13 55729430 55729644 -64554668 - URR1B DNA MER1_type -3 222 1 5 1010 418 202 0 92 chr13 55729644 55729680 -64554632 + PB1D10 SINE Alu 85 117 0 4 1010 22 0 0 0 chr13 55729912 55729934 -64554378 + AT_rich Low_complexity Low_complexity 1 22 0 5 1010 302 284 84 39 chr13 55730098 55730252 -64554060 - RSINE1 SINE B4 0 165 5 5 1010 728 217 34 78 chr13 55730277 55730482 -64553830 + B3A SINE B2 3 198 0 5 1010 24 53 0 0 chr13 55730482 55730520 -64553792 + AT_rich Low_complexity Low_complexity 1 38 0 5 1010 342 45 0 0 chr13 55730581 55730625 -64553687 + (CAGA)n Simple_repeat Simple_repeat 4 47 0 5 1010 657 244 25 11 chr13 55730643 55730802 -64553510 + B3A SINE B2 1 154 -41 5 1010 1591 37 37 0 chr13 55731087 55731274 -64553038 - B2_Mm2 SINE B2 0 195 2 5 1010 612 213 10 8 chr13 55731302 55731439 -64552873 + B1_Mus1 SINE Alu 2 134 -13 5 1010 775 207 14 0 chr13 55731440 55731585 -64552727 - B1_Mus1 SINE Alu 0 148 2 5 1010 299 206 0 0 chr13 55731587 55731650 -64552662 - L1M5 LINE L1 -744 5700 5638 5 1010 1353 79 6 11 chr13 55731754 55731933 -64552379 + B2_Mm1t SINE B2 1 178 -15 5 1010 188 35 35 0 chr13 55731936 55731965 -64552347 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 1010 645 221 17 9 chr13 55731982 55732121 -64552191 + B3 SINE B2 82 215 -1 5 1010 306 244 222 56 chr13 55732131 55732143 -64552169 + ID_B1 SINE B4 78 221 0 5 1010 565 184 27 18 chr13 55732143 55732254 -64552058 + PB1D9 SINE Alu 9 120 0 5 1010 704 183 9 0 chr13 55732815 55732930 -64551382 - B1_Mur2 SINE Alu -17 132 17 5 1010 417 220 0 115 chr13 55732833 55732946 -64551366 - MT2B LTR ERVL -337 264 165 5 1010 1422 66 17 0 chr13 55733995 55734176 -64550136 - B2_Mm1t SINE B2 -8 185 2 5 1010 884 229 23 37 chr13 55734237 55734455 -64549857 - B3 SINE B2 0 216 2 5 1010 910 245 24 0 chr13 55734635 55734843 -64549469 - B3 SINE B2 0 216 4 5 1010 1150 76 14 0 chr13 55734892 55735037 -64549275 + B1_Mus1 SINE Alu 2 148 0 5 1010 468 18 0 0 chr13 55735067 55735123 -64549189 + B1_Mus2 SINE Alu 80 135 -12 5 1010 212 59 0 29 chr13 55735123 55735158 -64549154 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 5 1010 1163 68 0 7 chr13 55735163 55735302 -64549010 + B1_Mus1 SINE Alu 2 140 -8 5 1010 285 29 0 0 chr13 55735302 55735336 -64548976 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 5 1010 521 219 75 31 chr13 55735650 55735810 -64548502 - RLTR42-int LTR ERVK -566 4956 4790 5 1010 203 194 0 0 chr13 55737140 55737176 -64547136 + (TTA)n Simple_repeat Simple_repeat 3 38 0 5 1010 1161 58 0 0 chr13 55737407 55737544 -64546768 - B1_Mm SINE Alu -9 138 2 5 1010 213 194 77 46 chr13 55738217 55738282 -64546030 - B1_Mur4 SINE Alu -56 94 28 5 1010 636 177 35 0 chr13 55738384 55738497 -64545815 + B3 SINE B2 1 117 -99 5 1010 252 0 0 0 chr13 55738509 55738537 -64545775 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1010 186 43 0 0 chr13 55738550 55738573 -64545739 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 5 1010 22 0 0 0 chr13 55738573 55738595 -64545717 + AT_rich Low_complexity Low_complexity 1 22 0 5 1010 292 364 27 9 chr13 55738696 55738807 -64545505 + L2 LINE L2 2849 2961 -458 5 1010 383 127 28 0 chr13 55738817 55738888 -64545424 + C-rich Low_complexity Low_complexity 4 76 0 5 1010 500 193 46 0 chr13 55738906 55739015 -64545297 - PB1D9 SINE Alu -5 115 2 5 1010 491 242 48 48 chr13 55739214 55739228 -64545084 + B4 SINE B4 77 90 -202 5 1010 935 98 0 0 chr13 55739228 55739351 -64544961 + B1_Mus1 SINE Alu 1 123 -25 5 1010 593 94 0 12 chr13 55740355 55740441 -64543871 - B1_Mur3 SINE Alu -19 130 46 5 1010 231 193 0 117 chr13 55740359 55740453 -64543859 - ID_B1 SINE B4 -21 203 121 5 1010 350 211 232 0 chr13 55740521 55740616 -64543696 + PB1D9 SINE Alu 2 118 -2 5 1010 182 385 31 0 chr13 55740628 55740724 -64543588 - MIR3 SINE MIR -40 168 70 5 1010 334 142 70 151 chr13 55741623 55741734 -64542578 - B3A SINE B2 0 198 98 5 1010 281 277 90 63 chr13 55741803 55741824 -64542488 - B2_Mm2 SINE B2 0 195 172 5 1010 863 72 136 0 chr13 55741824 55741949 -64542363 - B1_Mm SINE Alu -5 142 1 5 1010 383 224 89 29 chr13 55741949 55742116 -64542196 - B3A SINE B2 -24 171 2 5 1010 1238 34 0 7 chr13 55742129 55742277 -64542035 - B1_Mm SINE Alu 0 147 1 5 1010 230 167 24 0 chr13 55742615 55742657 -64541655 + B1F2 SINE Alu 22 64 -85 5 1010 340 353 87 41 chr13 55743234 55743476 -64540836 - L1M5 LINE L1 -566 5674 5422 5 1010 354 220 61 1 chr13 55743545 55743650 -64540662 - L1M5 LINE L1 -748 5436 5330 5 1010 523 234 80 69 chr13 55743663 55743693 -64540619 - B3A SINE B2 -1 197 171 5 1010 204 40 0 0 chr13 55743693 55743718 -64540594 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1010 523 234 80 69 chr13 55743718 55743875 -64540437 - B3A SINE B2 -28 170 8 5 1010 557 208 131 0 chr13 55744448 55744578 -64539734 + B1_Mur3 SINE Alu 3 149 0 5 1010 404 293 62 57 chr13 55744705 55744882 -64539430 + L1M5 LINE L1 3753 3930 -2216 5 1010 644 154 58 0 chr13 55744885 55744989 -64539323 - B1_Mur3 SINE Alu 0 149 40 5 1010 1134 102 0 0 chr13 55745034 55745181 -64539131 + B1_Mus1 SINE Alu 2 148 0 5 1010 234 116 0 0 chr13 55745189 55745232 -64539080 + (TCTG)n Simple_repeat Simple_repeat 4 46 0 5 1010 260 233 131 49 chr13 55745307 55745429 -64538883 - RLTR15 LTR ERVK -17 342 211 5 1010 499 133 0 0 chr13 55745687 55745762 -64538550 + B1_Mus2 SINE Alu 73 147 0 5 1010 711 258 58 15 chr13 55746012 55746217 -64538095 - B3 SINE B2 -1 215 2 5 1010 34 55 0 0 chr13 55746492 55746547 -64537765 + AT_rich Low_complexity Low_complexity 1 55 0 5 1010 382 273 91 0 chr13 55746561 55746671 -64537641 + RSINE1 SINE B4 10 129 -36 5 1010 237 160 60 0 chr13 55746771 55746821 -64537491 + GA-rich Low_complexity Low_complexity 5 57 0 5 1010 828 108 31 0 chr13 55746898 55747027 -64537285 - B1_Mur3 SINE Alu -15 134 2 5 1010 401 252 70 97 chr13 55747386 55747454 -64536858 - RMER6A LTR ERVK -12 708 655 5 1010 933 144 31 62 chr13 55747454 55747646 -64536666 - B2_Mm2 SINE B2 -8 187 2 5 1010 2989 137 62 30 chr13 55747646 55748231 -64536081 - RMER6A LTR ERVK -31 725 25 5 1010 918 186 86 15 chr13 55748251 55748448 -64535864 - B3 SINE B2 -3 213 3 5 1010 226 237 0 17 chr13 55748488 55748548 -64535764 + CT-rich Low_complexity Low_complexity 1 59 0 5 1010 24 32 0 0 chr13 55748621 55748652 -64535660 + AT_rich Low_complexity Low_complexity 1 31 0 5 1010 377 261 64 50 chr13 55748670 55748811 -64535501 - RSINE1 SINE B4 -19 146 4 5 1010 1004 116 0 0 chr13 55749494 55749632 -64534680 - B1_Mus2 SINE Alu -9 138 1 5 1010 226 205 153 24 chr13 55749633 55749718 -64534594 - L1M4 LINE L1 -278 5896 5801 5 1010 472 198 171 8 chr13 55749730 55749847 -64534465 - B1_Mur2 SINE Alu -11 138 3 5 1010 323 273 39 39 chr13 55749852 55749955 -64534357 - PB1D10 SINE Alu 0 117 15 5 1010 229 232 35 18 chr13 55750004 55750061 -64534251 - PB1 SINE Alu -6 121 64 5 1010 235 178 74 99 chr13 55750436 55750517 -64533795 - ID2 SINE ID -3 80 2 5 1010 1104 55 0 52 chr13 55750558 55750712 -64533600 - B1_Mus2 SINE Alu 0 147 2 5 1010 647 311 34 71 chr13 55750865 55751159 -64533153 + B4 SINE B4 2 284 -8 5 1010 439 255 50 38 chr13 55751596 55751755 -64532557 - RSINE1 SINE B4 0 165 5 5 1010 600 182 87 0 chr13 55752048 55752174 -64532138 + B1_Mur2 SINE Alu 5 141 -8 5 1010 274 309 44 126 chr13 55752254 55752351 -64531961 - RSINE1 SINE B4 -17 148 65 5 1010 945 106 30 0 chr13 55752351 55752483 -64531829 - B1_Mm SINE Alu -10 137 2 5 1010 274 309 44 126 chr13 55752483 55752544 -64531768 - RSINE1 SINE B4 -101 64 3 5 1010 782 221 94 10 chr13 55752581 55752773 -64531539 + B3 SINE B2 2 209 -7 5 1010 323 268 28 0 chr13 55753013 55753084 -64531228 + B3A SINE B2 21 93 -105 5 1010 1017 90 14 0 chr13 55753757 55753901 -64530411 + B1_Mus1 SINE Alu 3 148 0 5 1010 637 171 34 0 chr13 55755176 55755293 -64529019 - B1_Mur2 SINE Alu -27 122 2 5 1010 189 0 0 0 chr13 55756511 55756532 -64527780 + (TCTG)n Simple_repeat Simple_repeat 1 21 0 5 1010 186 133 0 0 chr13 55756747 55756777 -64527535 + (TATG)n Simple_repeat Simple_repeat 1 30 0 5 1010 435 305 33 25 chr13 55756777 55756898 -64527414 + B1F2 SINE Alu 17 138 -11 5 1010 3023 138 133 57 chr13 55756888 55757540 -64526772 - RMER6A LTR ERVK -54 702 1 5 1010 1523 59 5 0 chr13 55758012 55758199 -64526113 - B2_Mm1a SINE B2 -3 190 3 5 1010 429 252 26 97 chr13 55758264 55758418 -64525894 - B1_Mur3 SINE Alu -5 144 2 5 1010 1641 26 0 20 chr13 55758545 55758740 -64525572 + B2_Mm1a SINE B2 2 192 -1 5 1010 997 98 0 27 chr13 55758761 55758908 -64525404 - B1_Mus1 SINE Alu -1 147 5 5 1010 263 248 232 27 chr13 55758930 55759042 -64525270 - ID_B1 SINE B4 -5 219 85 5 1010 211 200 0 0 chr13 55759287 55759322 -64524990 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1010 575 282 25 25 chr13 55759331 55759491 -64524821 - RSINE1 SINE B4 -2 163 4 5 1010 1116 75 0 7 chr13 55759544 55759691 -64524621 - B1_Mm SINE Alu -1 146 1 5 1010 224 204 0 53 chr13 55759840 55759897 -64524415 + B3A SINE B2 2 55 -143 5 1010 414 238 114 38 chr13 55762198 55762329 -64521983 - B3A SINE B2 -9 207 67 5 1010 231 213 124 105 chr13 55762396 55762501 -64521811 - B3A SINE B2 -86 112 6 5 1010 183 129 0 0 chr13 55762828 55762859 -64521453 + (CATGC)n Simple_repeat Simple_repeat 2 32 0 6 1010 485 174 58 92 chr13 55763108 55763228 -64521084 + B1F2 SINE Alu 19 134 -15 6 1010 322 219 0 0 chr13 55763657 55763721 -64520591 - RSINE1 SINE B4 -87 78 15 6 1010 276 261 70 62 chr13 55763860 55763990 -64520322 - ORR1D2 LTR MaLR -26 353 223 6 1010 562 81 0 0 chr13 55764002 55764076 -64520236 - B2_Mm2 SINE B2 -77 118 45 6 1010 1221 35 7 0 chr13 55764118 55764263 -64520049 + B1_Mm SINE Alu 2 147 0 6 1010 443 377 29 0 chr13 55765485 55765660 -64518652 - B4A SINE B4 -105 187 8 6 1010 228 156 44 59 chr13 55765670 55765738 -64518574 - L1MB4 LINE L1 -126 6054 5988 6 1010 1396 80 37 0 chr13 55765855 55766042 -64518270 - B2_Mm2 SINE B2 0 195 2 6 1010 1129 90 0 0 chr13 55766105 55766250 -64518062 + B1_Mus2 SINE Alu 1 145 -2 6 1010 189 0 0 0 chr13 55766250 55766271 -64518041 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 6 1010 266 221 35 0 chr13 55766281 55766367 -64517945 + (TA)n Simple_repeat Simple_repeat 1 89 0 6 1010 217 132 0 0 chr13 55766537 55766575 -64517737 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 6 1010 1170 62 0 14 chr13 55766579 55766727 -64517585 - B1_Mus1 SINE Alu -1 147 2 6 1010 249 192 49 0 chr13 55766728 55766801 -64517511 - L1M3 LINE L1 -596 5582 5505 6 1010 447 176 82 0 chr13 55766844 55766929 -64517383 - B3 SINE B2 -120 96 5 6 1010 1130 50 36 0 chr13 55767091 55767230 -64517082 - B1_Mus2 SINE Alu 0 147 4 6 1010 493 243 98 78 chr13 55767257 55767462 -64516850 - B3 SINE B2 -6 210 2 6 1010 844 249 10 19 chr13 55767912 55768121 -64516191 + B3 SINE B2 10 216 0 6 1010 1116 129 155 0 chr13 55768285 55768479 -64515833 - URR1A DNA MER1_type 0 226 3 6 1010 23 33 0 0 chr13 55768679 55768709 -64515603 + AT_rich Low_complexity Low_complexity 1 30 0 6 1010 920 201 101 0 chr13 55768711 55768890 -64515422 - B3 SINE B2 -10 206 10 6 1010 282 298 94 26 chr13 55768990 55769107 -64515205 - MIRb SINE MIR -47 221 97 6 1010 474 275 78 42 chr13 55769142 55769309 -64515003 + B3 SINE B2 5 177 -39 6 1010 680 160 25 16 chr13 55769383 55769504 -64514808 + B1_Mus1 SINE Alu 6 127 -21 6 1010 1037 196 29 0 chr13 55769816 55770025 -64514287 + B3 SINE B2 2 216 0 6 1010 421 211 77 0 chr13 55770035 55770139 -64514173 - B3 SINE B2 -3 213 102 6 1010 264 297 68 59 chr13 55770193 55770311 -64514001 - PB1D7 SINE Alu 0 120 2 6 1010 682 206 16 0 chr13 55771290 55771416 -64512896 - B1_Mur3 SINE Alu 0 149 22 6 1010 518 212 87 7 chr13 55772132 55772270 -64512042 + B1_Mur1 SINE Alu 1 149 0 6 1010 1703 26 0 0 chr13 55772361 55772553 -64511759 + B2_Mm1a SINE B2 2 193 0 6 1010 1298 96 5 16 chr13 55772603 55772793 -64511519 - B2_Mm1a SINE B2 -4 189 2 6 1010 446 198 23 23 chr13 55772837 55772925 -64511387 + B3A SINE B2 1 88 -110 6 1010 241 336 91 27 chr13 55772925 55772947 -64511365 + B4A SINE B4 1 117 -175 6 1010 1099 75 0 7 chr13 55773194 55773341 -64510971 + B1_Mus2 SINE Alu 2 147 0 6 1010 466 293 42 17 chr13 55773535 55773653 -64510659 - RSINE1 SINE B4 -1 164 44 6 1010 244 171 26 26 chr13 55773656 55773734 -64510578 + (GTTTG)n Simple_repeat Simple_repeat 2 79 0 6 1010 423 102 344 54 chr13 55773736 55773829 -64510483 - PB1D9 SINE Alu 0 120 1 6 1010 234 246 0 34 chr13 55773829 55773888 -64510424 - RSINE1 SINE B4 -108 57 1 6 1010 1184 42 14 0 chr13 55773918 55774062 -64510250 + B1_Mm SINE Alu 2 147 0 6 1010 337 295 44 44 chr13 55774087 55774222 -64510090 + RSINE1 SINE B4 2 136 -29 6 1010 428 279 0 26 chr13 55774365 55774479 -64509833 - PB1D10 SINE Alu -1 116 6 6 1010 394 234 190 66 chr13 55774507 55774644 -64509668 + ID_B1 SINE B4 3 156 -68 6 1010 797 220 27 54 chr13 55774645 55774866 -64509446 + B3 SINE B2 2 216 0 6 1010 1162 48 7 33 chr13 55774871 55775023 -64509289 - B1_Mus1 SINE Alu 0 148 1 6 1010 1350 84 0 77 chr13 55775032 55775239 -64509073 - B2_Mm1t SINE B2 -1 192 2 6 1010 466 301 16 16 chr13 55775540 55775665 -64508647 - ID_B1 SINE B4 0 224 100 6 1010 211 143 24 0 chr13 55775691 55775733 -64508579 + T-rich Low_complexity Low_complexity 2 44 0 6 1010 1141 90 0 0 chr13 55775736 55775881 -64508431 - B1_Mus2 SINE Alu -1 146 2 6 1010 254 50 0 24 chr13 55776515 55776556 -64507756 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 1010 807 128 16 0 chr13 55776562 55776687 -64507625 - B1_Mus1 SINE Alu -12 136 10 6 1010 1269 21 14 0 chr13 55777073 55777218 -64507094 - B1_Mm SINE Alu 0 147 1 6 1010 457 251 84 102 chr13 55777596 55777822 -64506490 - ID_B1 SINE B4 -2 222 1 6 1010 416 243 68 0 chr13 55777964 55778067 -64506245 - RSINE1 SINE B4 -38 127 18 6 1010 243 218 0 0 chr13 55778542 55778597 -64505715 + T-rich Low_complexity Low_complexity 4 58 0 6 1010 234 184 215 38 chr13 55779049 55779128 -64505184 + PB1D10 SINE Alu 20 112 -5 6 1010 2066 186 96 11 chr13 55779406 55779863 -64504449 - Lx5 LINE L1 -176 6874 6379 6 1010 222 158 26 0 chr13 55779969 55780007 -64504305 - PB1D9 SINE Alu -81 39 1 6 1010 270 266 51 0 chr13 55780744 55780823 -64503489 - PB1D10 SINE Alu -8 109 27 6 1010 227 318 37 18 chr13 55780752 55780861 -64503451 - ID_B1 SINE B4 -46 178 68 6 1010 387 351 0 9 chr13 55781082 55781194 -64503118 + PB1D10 SINE Alu 1 111 -6 6 1010 252 235 0 19 chr13 55781206 55781258 -64503054 + ID4 SINE ID 3 53 -30 6 1010 255 331 147 7 chr13 55781299 55781442 -64502870 + RSINE1 SINE B4 3 165 0 6 1010 674 160 31 106 chr13 55781633 55781794 -64502518 + B1F2 SINE Alu 1 149 0 6 1010 519 282 54 8 chr13 55781875 55782036 -64502276 + B3 SINE B2 3 185 -10 6 1010 545 223 22 58 chr13 55782719 55782857 -64501455 - B1_Mur1 SINE Alu 0 149 17 6 1010 919 84 107 0 chr13 55782888 55783019 -64501293 + B1_Mus2 SINE Alu 3 147 0 6 1010 213 121 0 0 chr13 55783019 55783052 -64501260 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1010 710 149 42 69 chr13 55783054 55783198 -64501114 + B1_Mus1 SINE Alu 9 148 0 6 1010 272 252 95 57 chr13 55783981 55784086 -64500226 - PB1D7 SINE Alu 0 120 12 6 1010 235 186 128 0 chr13 55784088 55784163 -64500149 + L2a LINE L2 3205 3332 -94 6 1010 227 231 169 0 chr13 55784342 55784407 -64499905 + ID4_ SINE ID 2 77 -6 6 1010 241 206 14 14 chr13 55784434 55784508 -64499804 + T-rich Low_complexity Low_complexity 4 77 0 6 1010 1445 145 282 35 chr13 55784589 55785022 -64499290 + RLTR20A LTR ERVK 1 540 -1 6 1010 480 272 53 0 chr13 55785330 55785444 -64498868 + RSINE1 SINE B4 3 122 -43 6 1010 274 246 8 95 chr13 55785872 55785998 -64498314 + MT2A LTR ERVL 304 418 -115 6 1010 3500 51 14 77 chr13 55786028 55786212 -64498100 + MT2C_Mm LTR ERVL 1 184 -291 6 1010 902 62 128 30 chr13 55786212 55786345 -64497967 + B1_Mm SINE Alu 1 146 -1 6 1010 3500 51 14 77 chr13 55786345 55786667 -64497645 + MT2C_Mm LTR ERVL 185 475 0 6 1010 1182 41 14 7 chr13 55786816 55786962 -64497350 + B1_Mus1 SINE Alu 2 148 0 6 1010 186 118 0 0 chr13 55786962 55786996 -64497316 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1010 799 149 116 23 chr13 55787008 55787180 -64497132 + B2_Mm2 SINE B2 4 191 -4 6 1010 1407 181 95 75 chr13 55787187 55787475 -64496837 + ORR1C1 LTR MaLR 13 316 -62 6 1010 699 193 7 29 chr13 55787475 55787614 -64496698 - B1_Mur2 SINE Alu -13 136 1 6 1010 1407 181 95 75 chr13 55787614 55787684 -64496628 + ORR1C1 LTR MaLR 317 378 0 6 1010 492 228 102 0 chr13 55787687 55787796 -64496516 + B4 SINE B4 86 206 -86 6 1010 207 0 0 0 chr13 55788003 55788026 -64496286 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1010 1204 54 7 0 chr13 55788028 55788175 -64496137 - B1_Mus1 SINE Alu 0 148 1 6 1010 1597 37 21 0 chr13 55788188 55788375 -64495937 - B2_Mm1a SINE B2 -2 191 1 6 1010 28 0 0 0 chr13 55788377 55788405 -64495907 + AT_rich Low_complexity Low_complexity 1 28 0 6 1010 1210 56 0 0 chr13 55788405 55788549 -64495763 - B1_Mm SINE Alu -2 145 2 6 1010 1505 221 95 25 chr13 55788712 55789154 -64495158 + RLTR11A2 LTR ERVK 42 526 -1 6 1010 2373 68 3 0 chr13 55789788 55790095 -64494217 + RMER2 LTR ERV1 1 308 -259 6 1010 1301 88 12 0 chr13 55790095 55790265 -64494047 + B2_Mm1t SINE B2 3 174 -19 6 1010 1241 48 0 0 chr13 55790265 55790409 -64493903 + B1_Mus2 SINE Alu 1 145 -2 6 1010 186 71 0 0 chr13 55790413 55790441 -64493871 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 1010 336 65 363 43 chr13 55790529 55790642 -64493670 + B2_Mm2 SINE B2 47 195 0 6 1010 1742 118 46 0 chr13 55790646 55790908 -64493404 + RMER2 LTR ERV1 294 567 0 6 1010 768 147 223 0 chr13 55790912 55791096 -64493216 + URR1B DNA MER1_type 1 225 0 6 1010 714 165 25 0 chr13 55791097 55791218 -64493094 - B1_Mur3 SINE Alu -25 124 1 6 1010 494 254 20 68 chr13 55791218 55791249 -64493063 - ID SINE ID -143 81 58 6 1010 300 269 224 30 chr13 55791215 55791380 -64492932 - MER77 LTR ERVL -282 325 129 6 1010 1677 162 55 204 chr13 55791380 55791870 -64492442 + MTC LTR MaLR 1 417 -4 6 1010 923 39 139 0 chr13 55791870 55791999 -64492313 + B1_Mm SINE Alu 1 147 0 6 1010 200 130 0 36 chr13 55792013 55792069 -64492243 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 7 1010 1283 70 34 28 chr13 55792229 55792406 -64491906 + B2_Mm2 SINE B2 4 181 -14 7 1010 411 21 0 0 chr13 55792936 55792984 -64491328 + (TTTC)n Simple_repeat Simple_repeat 1 48 0 7 1010 1330 64 40 6 chr13 55792984 55793157 -64491155 - B2_Mm2 SINE B2 -15 180 2 7 1010 216 0 0 0 chr13 55793492 55793516 -64490796 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 7 1010 565 179 40 24 chr13 55793519 55793533 -64490779 - ID_B1 SINE B4 -17 207 82 7 1010 894 55 0 0 chr13 55793533 55793643 -64490669 - B1_Mus1 SINE Alu -38 110 1 7 1010 275 264 46 15 chr13 55793535 55793666 -64490646 - ORR1B1-int LTR MaLR -755 754 620 7 1010 369 167 0 0 chr13 55793674 55793740 -64490572 - L1_Mur2 LINE L1 -465 5412 5347 7 1010 245 274 164 87 chr13 55793979 55794025 -64490287 - ID_B1 SINE B4 0 224 1 7 1010 1253 43 19 6 chr13 55794025 55794187 -64490125 - B2_Mm2 SINE B2 -31 164 1 7 1010 21 0 0 0 chr13 55794565 55794586 -64489726 + GC_rich Low_complexity Low_complexity 1 21 0 7 1010 27 29 0 0 chr13 55794711 55794745 -64489567 + GC_rich Low_complexity Low_complexity 1 34 0 7 1010 21 0 0 0 chr13 55794818 55794839 -64489473 + GC_rich Low_complexity Low_complexity 1 21 0 7 1010 210 317 93 47 chr13 55795724 55795810 -64488502 + B3A SINE B2 20 109 -89 7 1010 233 292 15 0 chr13 55795889 55795954 -64488358 + PB1D7 SINE Alu 3 68 -52 7 1010 939 131 64 59 chr13 55796153 55796340 -64487972 + B2_Mm2 SINE B2 2 189 -6 7 1010 500 306 87 74 chr13 55796495 55796724 -64487588 - B4A SINE B4 -2 290 59 7 1010 275 212 169 45 chr13 55796791 55796880 -64487432 + MER20 DNA MER1_type 42 141 -78 7 1010 432 0 0 0 chr13 55797078 55797126 -64487186 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1010 261 0 0 0 chr13 55797210 55797239 -64487073 + (C)n Simple_repeat Simple_repeat 1 29 0 7 1010 830 137 23 0 chr13 55797241 55797372 -64486940 - B1_Mur4 SINE Alu -16 134 1 7 1010 372 316 103 19 chr13 55797372 55797583 -64486729 - B4A SINE B4 -63 229 1 7 1010 246 62 0 0 chr13 55797591 55797623 -64486689 + (T)n Simple_repeat Simple_repeat 1 32 0 7 1010 1258 41 0 0 chr13 55797623 55797770 -64486542 - B1_Mm SINE Alu 0 147 1 7 1010 645 14 0 0 chr13 55797878 55797952 -64486360 + (TTTTC)n Simple_repeat Simple_repeat 2 75 0 7 1010 487 143 196 0 chr13 55797967 55798079 -64486233 - B1_Mus2 SINE Alu -1 146 13 7 1010 230 175 111 111 chr13 55798000 55798090 -64486222 - MT2B LTR ERVL -344 257 168 7 1010 1044 56 28 7 chr13 55798668 55798812 -64485500 - B1_Mus1 SINE Alu 0 148 2 7 1010 441 212 0 126 chr13 55798700 55798835 -64485477 - MT2B LTR ERVL -337 264 147 7 1010 302 327 73 0 chr13 55799182 55799332 -64484980 - RSINE1 SINE B4 -2 163 3 7 1010 1384 66 39 0 chr13 55799479 55799660 -64484652 - B2_Mm2 SINE B2 -6 189 2 7 1010 829 224 36 15 chr13 55799688 55799883 -64484429 - B3 SINE B2 -17 199 1 7 1010 247 277 200 21 chr13 55799952 55800092 -64484220 - RMER15 LTR ERVL 0 575 411 7 1010 1226 21 14 7 chr13 55801585 55801730 -64482582 + B1_Mus2 SINE Alu 2 147 0 7 1010 662 181 96 15 chr13 55802257 55802392 -64481920 + B1_Mm SINE Alu 2 147 0 7 1010 21 0 0 0 chr13 55803967 55803988 -64480324 + AT_rich Low_complexity Low_complexity 1 21 0 7 1010 238 322 87 0 chr13 55804920 55805035 -64479277 - RSINE1 SINE B4 -30 135 11 7 1010 958 117 13 33 chr13 55805152 55805302 -64479010 - B1_Mus2 SINE Alu 0 147 1 7 1010 3118 165 118 18 chr13 55805322 55805951 -64478361 - RLTR17 LTR ERVK 0 692 1 7 1010 3698 177 48 60 chr13 55805951 55806866 -64477446 - RMER3D-int LTR ERVK 0 2842 1939 7 1010 1078 45 75 0 chr13 55806867 55807001 -64477311 + B1_Mus2 SINE Alu 3 146 -1 7 1010 766 164 268 79 chr13 55807088 55807357 -64476955 - MTC LTR MaLR -44 377 58 7 1010 448 266 210 14 chr13 55807405 55807690 -64476622 - ORR1E LTR MaLR 0 379 1 7 1010 1777 296 57 5 chr13 55807690 55808285 -64476027 - Lx8 LINE L1 -546 6927 6302 7 1010 443 247 36 72 chr13 55808481 55808647 -64475665 + RSINE1 SINE B4 4 163 -2 7 1010 818 248 43 14 chr13 55808658 55808867 -64475445 - B3 SINE B2 0 216 2 7 1010 1610 32 0 21 chr13 55808879 55809072 -64475240 - B2_Mm1a SINE B2 -4 189 1 7 1010 313 319 103 8 chr13 55809102 55809219 -64475093 - Tigger5 DNA MER2_type -2218 188 61 7 1010 1114 84 0 0 chr13 55809371 55809514 -64474798 + B1_Mus1 SINE Alu 3 145 -3 7 1010 452 212 88 93 chr13 55809777 55810022 -64474290 + RMER4B LTR ERVK 343 588 -23 7 1010 625 223 8 0 chr13 55810033 55810163 -64474149 - B1_Mus2 SINE Alu -15 132 2 7 1010 840 222 196 0 chr13 55810971 55811196 -64473116 + ORR1D2 LTR MaLR 97 365 -5 7 1010 226 243 40 26 chr13 55811662 55811738 -64472574 - MTC LTR MaLR -14 365 289 7 1010 265 250 0 91 chr13 55812137 55812203 -64472109 - B1F1 SINE Alu -5 144 85 7 1010 409 232 47 17 chr13 55812280 55812417 -64471895 + B3A SINE B2 77 216 0 7 1010 1190 61 0 7 chr13 55812571 55812719 -64471593 + B1_Mus1 SINE Alu 1 147 -1 7 1010 238 102 0 48 chr13 55812719 55812781 -64471531 + (CAAA)n Simple_repeat Simple_repeat 1 59 0 7 1010 365 288 36 0 chr13 55812844 55812955 -64471357 + PB1D10 SINE Alu 2 116 -1 7 1010 1304 53 105 0 chr13 55812959 55813130 -64471182 + B2_Mm1t SINE B2 1 189 -4 7 1010 2022 195 38 93 chr13 55813182 55813701 -64470611 - RLTR31A_Mm LTR ERVK 0 557 1 7 1010 456 305 18 89 chr13 55813701 55813860 -64470452 + B3A SINE B2 52 198 0 7 1010 428 0 19 0 chr13 55813982 55814034 -64470278 + (TTA)n Simple_repeat Simple_repeat 2 54 0 7 1010 1026 65 41 41 chr13 55814034 55814179 -64470133 - B1_Mus1 SINE Alu -3 145 1 7 1010 559 170 44 9 chr13 55814187 55814300 -64470012 - B1F2 SINE Alu -7 142 26 7 1010 1098 134 67 0 chr13 55814307 55814486 -64469826 - B2_Mm2 SINE B2 -3 192 2 7 1010 1208 153 27 36 chr13 55814486 55814710 -64469602 - MTC LTR MaLR -187 234 13 7 1010 30 0 0 0 chr13 55814717 55814747 -64469565 + AT_rich Low_complexity Low_complexity 1 30 0 7 1010 524 260 166 0 chr13 55814747 55814928 -64469384 - B3 SINE B2 -1 215 5 7 1010 242 279 0 0 chr13 55815137 55815198 -64469114 + CT-rich Low_complexity Low_complexity 3 63 0 7 1010 364 278 115 111 chr13 55815198 55815316 -64468996 - B4A SINE B4 -48 244 1 7 1010 566 183 0 11 chr13 55815224 55815318 -64468994 - B1F SINE Alu -7 142 50 7 1010 990 64 0 0 chr13 55815316 55815441 -64468871 - B2_Mm2 SINE B2 -70 125 1 7 1010 23 0 0 0 chr13 55815557 55815580 -64468732 + AT_rich Low_complexity Low_complexity 1 23 0 7 1010 487 17 0 0 chr13 55815587 55815646 -64468666 - B2_Mm1t SINE B2 -133 60 2 7 1010 302 311 98 68 chr13 55816436 55816621 -64467691 - MIRb SINE MIR -70 198 8 7 1010 653 143 143 0 chr13 55816870 55816996 -64467316 - B1_Mur4 SINE Alu -3 147 4 7 1010 183 330 63 11 chr13 55817116 55817211 -64467101 - MIRb SINE MIR -134 134 35 7 1010 1188 62 0 0 chr13 55817268 55817412 -64466900 + B1_Mus1 SINE Alu 5 148 0 7 1010 198 0 0 0 chr13 55817412 55817434 -64466878 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1010 283 284 0 0 chr13 55817656 55817730 -64466582 + ID_B1 SINE B4 83 156 -68 7 1010 350 308 10 5 chr13 55818154 55818276 -64466036 - B1F SINE Alu 0 120 1 7 1010 255 348 8 65 chr13 55818276 55818329 -64465983 - B4 SINE B4 -207 85 40 7 1010 199 361 31 37 chr13 55818465 55818626 -64465686 - L2b LINE L2 -192 3183 3024 7 1010 740 169 146 47 chr13 55818703 55818895 -64465417 + RLTR11B LTR ERVK 217 427 -26 7 1010 739 92 0 0 chr13 55818872 55818970 -64465342 - B1_Mus1 SINE Alu -50 98 1 7 1010 353 250 8 97 chr13 55818970 55819010 -64465302 - MT2B LTR ERVL -445 156 128 7 1010 217 196 0 38 chr13 55819648 55819701 -64464611 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 7 1010 217 254 0 17 chr13 55819742 55819802 -64464510 - PB1 SINE Alu -27 100 42 7 1010 281 197 49 0 chr13 55819880 55819941 -64464371 - ID_B1 SINE B4 -9 215 152 7 1010 1192 98 11 17 chr13 55819946 55819975 -64464337 - B2_Mm2 SINE B2 -19 176 148 7 1010 387 0 0 0 chr13 55819975 55820018 -64464294 + (TATG)n Simple_repeat Simple_repeat 2 44 0 7 1010 1192 98 11 17 chr13 55820018 55820164 -64464148 - B2_Mm2 SINE B2 -48 147 2 7 1010 398 299 17 5 chr13 55820169 55820296 -64464016 - ID_B1 SINE B4 -66 158 33 7 1010 436 198 25 0 chr13 55820420 55820501 -64463811 + ID4 SINE ID 1 83 0 7 1010 760 241 36 16 chr13 55820528 55820722 -64463590 + B3A SINE B2 1 198 0 7 1010 1745 131 172 3 chr13 55821137 55821474 -64462838 - ORR1B1 LTR MaLR 0 394 1 7 1010 276 256 11 103 chr13 55821479 55821566 -64462746 - MTEb LTR MaLR -7 372 294 7 1010 452 202 33 15 chr13 55821692 55821799 -64462513 + PB1D9 SINE Alu 14 120 0 7 1010 827 207 132 0 chr13 55821833 55822007 -64462305 + B3 SINE B2 1 197 -19 7 1010 711 201 13 225 chr13 55822122 55822338 -64461974 + B3 SINE B2 14 216 0 7 1010 1137 82 0 0 chr13 55822338 55822485 -64461827 + B1_Mus2 SINE Alu 1 147 0 7 1010 404 201 13 225 chr13 55822485 55822499 -64461813 + B2_Mm2 SINE B2 185 195 0 7 1010 416 118 8 12 chr13 55822796 55822885 -64461427 - B1_Mur2 SINE Alu -20 127 43 7 1010 857 230 96 5 chr13 55823454 55823651 -64460661 - B3 SINE B2 0 216 2 7 1010 229 300 17 0 chr13 55823651 55823711 -64460601 - B3A SINE B2 -137 61 1 8 1010 960 112 12 17 chr13 55823739 55823911 -64460401 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 8 1010 419 192 224 16 chr13 55823929 55823948 -64460364 - ID_B1 SINE B4 -52 240 143 8 1010 625 160 19 0 chr13 55823948 55824054 -64460258 - PB1D7 SINE Alu -6 114 7 8 1010 405 0 0 0 chr13 55824437 55824482 -64459830 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1010 1626 212 78 18 chr13 55824482 55824867 -64459445 - MT2A LTR ERVL -125 408 1 8 1010 192 40 0 0 chr13 55826034 55826059 -64458253 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 8 1010 411 51 0 0 chr13 55826060 55826122 -64458190 - B1_Mur4 SINE Alu -1 149 58 8 1010 577 191 57 0 chr13 55827799 55827904 -64456408 + RSINE1 SINE B4 3 113 -52 8 1010 230 226 271 9 chr13 55827945 55828052 -64456260 + ID_B1 SINE B4 88 222 -2 8 1010 1246 73 93 22 chr13 55828088 55828270 -64456042 + B2_Mm2 SINE B2 1 195 0 8 1010 256 203 0 45 chr13 55828735 55828802 -64455510 + (CGG)n Simple_repeat Simple_repeat 2 65 0 8 1010 372 214 19 10 chr13 55828914 55829018 -64455294 + PB1D9 SINE Alu 16 120 0 8 1010 233 209 0 23 chr13 55829331 55829375 -64454937 + B1F SINE Alu 21 63 -86 8 1010 308 314 57 8 chr13 55829560 55829682 -64454630 - L1MC4 LINE L1 -157 7885 7758 8 1010 32 0 0 0 chr13 55829765 55829797 -64454515 + AT_rich Low_complexity Low_complexity 1 32 0 8 1010 405 231 45 18 chr13 55829888 55829998 -64454314 - PB1D10 SINE Alu -1 116 4 8 1010 429 267 12 0 chr13 55830277 55830363 -64453949 - B1_Mus2 SINE Alu -58 89 3 8 1010 1412 95 11 0 chr13 55830374 55830564 -64453748 - B2_Mm1t SINE B2 -1 192 1 8 1010 782 114 0 0 chr13 55830600 55830714 -64453598 + B1_Mus2 SINE Alu 24 137 -10 8 1010 309 51 0 0 chr13 55830714 55830753 -64453559 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 8 1010 1040 150 118 10 chr13 55830972 55831167 -64453145 + B3 SINE B2 1 216 0 8 1010 438 20 0 0 chr13 55831908 55831959 -64452353 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1010 333 0 0 0 chr13 55831959 55831995 -64452317 + (GA)n Simple_repeat Simple_repeat 2 38 0 8 1010 984 136 14 0 chr13 55832030 55832177 -64452135 - B1_Mur3 SINE Alu 0 149 1 8 1010 1202 68 0 0 chr13 55832505 55832652 -64451660 + B1_Mus1 SINE Alu 2 148 0 8 1010 1487 68 16 0 chr13 55833106 55833296 -64451016 + B2_Mm2 SINE B2 2 194 -1 8 1010 1239 61 0 0 chr13 55833297 55833444 -64450868 + B1_Mus2 SINE Alu 1 147 0 8 1010 216 0 0 0 chr13 55833444 55833468 -64450844 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1010 189 0 0 0 chr13 55833473 55833494 -64450818 + (GA)n Simple_repeat Simple_repeat 2 22 0 8 1010 2017 153 116 0 chr13 55833503 55833856 -64450456 - ORR1B1 LTR MaLR 0 394 1 8 1010 385 333 43 67 chr13 55834584 55834633 -64449679 + ID_B1 SINE B4 51 210 -14 8 1010 467 261 104 0 chr13 55834633 55834748 -64449564 + B1F1 SINE Alu 9 135 -14 8 1010 297 0 0 0 chr13 55834750 55834783 -64449529 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1010 249 182 0 0 chr13 55834786 55834841 -64449471 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 8 1010 584 346 120 12 chr13 55836062 55836486 -64447826 - MER90a LTR ERV1 -10 604 135 8 126 355 244 98 82 chr13 55836615 55836761 -64447551 + B2_Mm1a SINE B2 2 152 -41 8 1011 186 103 0 0 chr13 55836761 55836790 -64447522 + (CA)n Simple_repeat Simple_repeat 1 29 0 8 1011 355 244 98 82 chr13 55836790 55836826 -64447486 + B2_Mm1a SINE B2 153 186 -7 8 1011 207 182 0 0 chr13 55836827 55836860 -64447452 + (TATATG)n Simple_repeat Simple_repeat 6 38 0 8 1011 287 286 29 0 chr13 55837091 55837161 -64447151 + ID4_ SINE ID 11 82 -1 8 1011 874 236 6 3 chr13 55837312 55837500 -64446812 - B3A SINE B2 -13 203 12 8 1011 512 56 14 0 chr13 55837684 55837756 -64446556 + (TG)n Simple_repeat Simple_repeat 1 73 0 8 1011 715 297 0 50 chr13 55837765 55837985 -64446327 - B4A SINE B4 -3 289 81 8 1011 371 68 17 0 chr13 55838015 55838074 -64446238 + (CA)n Simple_repeat Simple_repeat 1 60 0 8 1011 180 77 0 0 chr13 55838074 55838100 -64446212 + (GA)n Simple_repeat Simple_repeat 1 26 0 8 1011 494 178 0 8 chr13 55838171 55838301 -64446011 + (CA)n Simple_repeat Simple_repeat 2 130 0 8 1011 259 220 17 17 chr13 55838333 55838393 -64445919 - B4A SINE B4 -232 60 1 8 1011 372 283 35 70 chr13 55838426 55838540 -64445772 - PB1D7 SINE Alu 0 120 11 8 1011 308 303 28 66 chr13 55838445 55838551 -64445761 - ID_B1 SINE B4 -45 179 78 8 1011 968 202 23 50 chr13 55838654 55838873 -64445439 - B3 SINE B2 -3 213 1 8 1011 326 248 110 37 chr13 55838887 55838996 -64445316 + PB1D10 SINE Alu 1 117 0 8 1011 261 0 0 0 chr13 55840240 55840269 -64444043 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 8 1011 1060 188 98 5 chr13 55840446 55840610 -64443702 + B3 SINE B2 1 164 -52 8 1011 546 79 0 0 chr13 55840610 55840686 -64443626 + (TA)n Simple_repeat Simple_repeat 1 76 0 8 1011 1060 188 98 5 chr13 55840686 55840714 -64443598 + B3 SINE B2 165 209 -7 8 1011 748 216 14 0 chr13 55841039 55841187 -64443125 + B3A SINE B2 8 157 -41 8 1011 932 225 5 29 chr13 55842493 55842699 -64441613 - B3 SINE B2 -14 202 2 8 1011 210 291 34 34 chr13 55844320 55844409 -64439903 - L2a LINE L2 -56 3370 3282 8 1011 566 256 7 22 chr13 55844732 55844868 -64439444 + ID_B1 SINE B4 82 215 -9 8 1011 222 346 117 18 chr13 55844985 55845371 -64438941 - L2a LINE L2 -824 2595 2172 8 1011 235 283 0 0 chr13 55845469 55845522 -64438790 + PB1D7 SINE Alu 19 71 -49 8 1011 332 268 0 0 chr13 55845571 55845642 -64438670 - RSINE1 SINE B4 -19 146 76 8 1011 1140 217 156 7 chr13 55845766 55846049 -64438263 - ORR1D2 LTR MaLR 0 370 46 8 1011 396 0 0 0 chr13 55846748 55846792 -64437520 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 8 1011 985 151 12 25 chr13 55846792 55846955 -64437357 - B2_Mm2 SINE B2 -34 161 1 8 1011 1421 72 39 0 chr13 55846985 55847166 -64437146 + B2_Mm2 SINE B2 1 188 -7 8 1011 214 151 0 54 chr13 55847172 55847228 -64437084 + CT-rich Low_complexity Low_complexity 2 54 0 8 1011 21 0 0 0 chr13 55847259 55847280 -64437032 + AT_rich Low_complexity Low_complexity 1 21 0 8 1011 219 238 0 0 chr13 55847280 55847322 -64436990 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 8 1011 866 206 25 6 chr13 55847338 55847499 -64436813 + B3A SINE B2 1 164 -34 8 1011 441 81 0 0 chr13 55847502 55847564 -64436748 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 1011 507 241 0 18 chr13 55847613 55847723 -64436589 + PB1D10 SINE Alu 1 108 -9 8 1011 520 300 0 8 chr13 55847833 55847954 -64436358 - PB1 SINE Alu -7 120 1 8 1011 291 253 45 22 chr13 55848474 55848563 -64435749 - RLTR12B LTR ERVK -321 207 117 8 1011 788 276 85 19 chr13 55848578 55848848 -64435464 - B4 SINE B4 -2 290 3 8 1011 267 161 0 0 chr13 55849450 55849506 -64434806 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1011 438 238 118 37 chr13 55849506 55849521 -64434791 - B1F1 SINE Alu -3 146 1 8 1011 555 227 75 8 chr13 55849521 55849641 -64434671 - ID_B1 SINE B4 -15 209 82 8 1011 544 222 28 0 chr13 55850464 55850572 -64433740 + PB1D10 SINE Alu 1 111 -6 8 1011 21 0 0 0 chr13 55852684 55852705 -64431607 + AT_rich Low_complexity Low_complexity 1 21 0 8 1011 902 202 53 39 chr13 55852708 55852914 -64431398 - B3 SINE B2 -6 210 2 8 1011 396 232 78 23 chr13 55853148 55853276 -64431036 - B1F1 SINE Alu -12 137 3 8 1011 1638 37 16 0 chr13 55853291 55853481 -64430831 - B2_Mm1a SINE B2 0 193 1 8 1011 580 152 10 10 chr13 55853580 55853680 -64430632 + B1_Mur4 SINE Alu 50 149 -1 8 1011 848 141 35 7 chr13 55853703 55853846 -64430466 + B1_Mur3 SINE Alu 3 149 0 8 1011 339 208 171 38 chr13 55853890 55853995 -64430317 - B3A SINE B2 -79 119 1 8 1011 215 211 0 0 chr13 55854059 55854097 -64430215 - ID4 SINE ID -44 39 2 8 1011 637 258 0 119 chr13 55854156 55854341 -64429971 + RSINE1 SINE B4 3 165 0 8 1011 318 50 0 0 chr13 55855524 55855564 -64428748 + (CA)n Simple_repeat Simple_repeat 2 41 0 8 1011 219 330 84 59 chr13 55857460 55857509 -64426803 - B3 SINE B2 -3 213 7 8 1011 633 255 26 0 chr13 55857509 55857662 -64426650 - RSINE1 SINE B4 -1 164 8 8 1011 792 154 238 17 chr13 55859098 55859270 -64425042 + B3 SINE B2 3 212 -4 8 1011 1215 54 7 0 chr13 55859280 55859427 -64424885 + B1_Mus1 SINE Alu 1 148 0 8 1011 303 136 0 0 chr13 55859429 55859488 -64424824 + (A)n Simple_repeat Simple_repeat 1 59 0 8 1011 200 111 28 0 chr13 55859758 55859794 -64424518 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1011 239 173 19 0 chr13 55859857 55859909 -64424403 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 1011 357 145 9 9 chr13 55859946 55860060 -64424252 + (CA)n Simple_repeat Simple_repeat 1 114 0 8 1011 295 206 26 52 chr13 55860060 55860137 -64424175 - ID2 SINE ID -7 76 2 8 1011 1588 42 21 0 chr13 55860175 55860364 -64423948 + B2_Mm1a SINE B2 1 193 0 8 1011 494 242 171 0 chr13 55860732 55860926 -64423386 - B4A SINE B4 -64 228 2 8 1011 228 250 71 107 chr13 55860959 55861071 -64423241 - B1F SINE Alu 0 149 42 8 1011 459 141 0 0 chr13 55861085 55861163 -64423149 + (TCC)n Simple_repeat Simple_repeat 2 79 0 8 1011 520 229 19 20 chr13 55861170 55861280 -64423032 - B3A SINE B2 -80 113 7 8 1011 299 92 30 30 chr13 55861283 55861350 -64422962 + C-rich Low_complexity Low_complexity 5 71 0 8 1011 767 172 11 31 chr13 55861376 55861532 -64422780 - B1_Mus2 SINE Alu 0 311 28 8 1011 965 161 7 0 chr13 55861532 55861681 -64422631 + B1_Mur4 SINE Alu 1 150 0 9 1011 215 273 48 134 chr13 55861681 55861710 -64422602 - FAM SINE Alu -145 166 142 8 1011 21 0 0 0 chr13 55862711 55862732 -64421580 + AT_rich Low_complexity Low_complexity 1 21 0 9 1011 207 204 0 0 chr13 55864300 55864344 -64419968 + (CA)n Simple_repeat Simple_repeat 1 44 0 9 1011 730 270 56 14 chr13 55865043 55865257 -64419055 + ID_B1 SINE B4 2 224 0 9 1011 282 209 33 99 chr13 55866081 55866450 -64417862 + (CTGGGG)n Simple_repeat Simple_repeat 1 344 0 9 1011 491 196 6 0 chr13 55866730 55866888 -64417424 + (CA)n Simple_repeat Simple_repeat 1 159 0 9 1011 21 36 0 0 chr13 55867556 55867584 -64416728 + AT_rich Low_complexity Low_complexity 1 28 0 9 1011 192 40 0 0 chr13 55868727 55868752 -64415560 + (TTTTTG)n Simple_repeat Simple_repeat 4 28 0 9 1011 555 290 21 0 chr13 55869245 55869390 -64414922 - RSINE1 SINE B4 -16 149 2 9 1011 803 187 22 0 chr13 55869403 55869542 -64414770 - B1_Mur1 SINE Alu -7 142 1 9 1011 495 209 90 9 chr13 55869547 55869704 -64414608 - B3 SINE B2 -14 181 8 9 1011 310 314 49 0 chr13 55869698 55869800 -64414512 - PB1D10 SINE Alu -5 112 6 9 1011 240 59 0 0 chr13 55869899 55869933 -64414379 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 9 1011 975 186 115 21 chr13 55869966 55870158 -64414154 - B3 SINE B2 -6 210 1 9 1011 1181 83 0 6 chr13 55870225 55870383 -64413929 + B2_Mm2 SINE B2 1 157 -38 9 1011 182 37 37 0 chr13 55870383 55870410 -64413902 + (TAAA)n Simple_repeat Simple_repeat 3 30 0 9 1011 1170 87 6 44 chr13 55870410 55870431 -64413881 + B2_Mm1a SINE B2 159 173 -20 9 1011 813 246 36 11 chr13 55870480 55870691 -64413621 - B3 SINE B2 0 216 2 9 1011 301 205 26 18 chr13 55871291 55871405 -64412907 + (TG)n Simple_repeat Simple_repeat 1 115 0 9 1011 349 286 150 48 chr13 55871405 55871552 -64412760 - RSINE1 SINE B4 0 165 4 9 1011 1190 179 10 5 chr13 55871763 55871971 -64412341 - B3 SINE B2 -4 212 4 9 1011 8460 115 43 5 chr13 55872114 55873386 -64410926 - Lx4A LINE L1 0 7058 5738 9 1011 951 146 61 11 chr13 55873386 55873566 -64410746 + Lx4A LINE L1 5566 5754 -123 9 1011 231 36 0 0 chr13 55873939 55873967 -64410345 + (CAT)n Simple_repeat Simple_repeat 2 29 0 9 1011 624 289 13 26 chr13 55873971 55874124 -64410188 - RSINE1 SINE B4 -1 164 14 9 1011 258 32 0 0 chr13 55874193 55874224 -64410088 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 9 1011 444 236 0 145 chr13 55874224 55874275 -64410037 - B1_Mur1 SINE Alu -5 144 95 9 1011 207 0 0 0 chr13 55874275 55874298 -64410014 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1011 980 118 0 0 chr13 55874299 55874435 -64409877 - B1_Mus1 SINE Alu -12 136 1 9 1011 444 236 0 145 chr13 55874435 55874505 -64409807 - B1_Mur1 SINE Alu -55 94 39 9 1011 252 279 36 48 chr13 55874436 55874519 -64409793 - RLTR25B LTR ERVK -521 507 426 9 1011 330 167 16 32 chr13 55874532 55874594 -64409718 + RSINE1 SINE B4 3 63 -102 9 1011 212 294 46 83 chr13 55874594 55874653 -64409659 + B2_Mm1t SINE B2 2 119 -79 9 1011 22 0 0 0 chr13 55874942 55874964 -64409348 + AT_rich Low_complexity Low_complexity 1 22 0 9 1011 315 220 431 0 chr13 55874977 55875120 -64409192 + B3A SINE B2 12 216 0 9 1011 441 206 0 0 chr13 55875135 55875232 -64409080 + GA-rich Low_complexity Low_complexity 1 97 0 9 1011 1613 48 0 0 chr13 55875369 55875558 -64408754 + B2_Mm1t SINE B2 1 189 -4 9 1011 36 0 0 0 chr13 55875573 55875609 -64408703 + AT_rich Low_complexity Low_complexity 1 36 0 9 1011 356 266 109 31 chr13 55877068 55877196 -64407116 - B1F2 SINE Alu -3 146 9 9 1011 614 238 151 7 chr13 55878262 55878414 -64405898 - B3A SINE B2 -24 174 1 9 1011 874 174 99 30 chr13 55878550 55878752 -64405560 - B3 SINE B2 0 216 1 9 1011 615 274 259 57 chr13 55879358 55879654 -64404658 - MTEa LTR MaLR -4 375 20 9 1011 21 0 0 0 chr13 55879682 55879703 -64404609 + AT_rich Low_complexity Low_complexity 1 21 0 9 1011 3026 24 0 0 chr13 55880423 55880760 -64403552 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 1011 24023 36 37 12 chr13 55880760 55883786 -64400526 + IAPEz-int LTR ERVK 8 3108 -3373 9 1011 8362 24 2 6 chr13 55883770 55884770 -64399542 + IAPEz-int LTR ERVK 5486 6481 0 9 1011 3026 24 0 0 chr13 55884770 55885107 -64399205 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 1011 338 262 128 27 chr13 55885404 55885553 -64398759 + RMER15 LTR ERVL 405 568 -7 9 1011 262 238 18 82 chr13 55886459 55886569 -64397743 - B3 SINE B2 -2 214 112 9 1011 228 279 0 62 chr13 55886615 55886680 -64397632 - AluF_3 SINE Alu -109 202 142 9 1011 651 190 0 0 chr13 55886685 55886822 -64397490 + (TG)n Simple_repeat Simple_repeat 2 138 0 9 1011 398 256 16 0 chr13 55886809 55886934 -64397378 + (CATATA)n Simple_repeat Simple_repeat 5 131 0 9 1011 217 245 0 0 chr13 55887295 55887344 -64396968 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 9 1011 369 43 0 0 chr13 55888385 55888432 -64395880 + (CAT)n Simple_repeat Simple_repeat 1 47 0 9 1011 590 121 40 0 chr13 55888514 55888613 -64395699 - B1_Mur4 SINE Alu -1 149 47 9 1011 2397 83 6 0 chr13 55889851 55890176 -64394136 - ORR1A2 LTR MaLR 0 327 1 9 1011 292 271 35 0 chr13 55890208 55890293 -64394019 - Lx8 LINE L1 -965 6508 6421 9 1011 1539 16 21 11 chr13 55890466 55890657 -64393655 + B2_Mm1a SINE B2 1 193 0 9 1011 471 161 41 41 chr13 55890956 55891053 -64393259 + B1_Mur3 SINE Alu 3 99 -50 9 1011 1181 43 37 6 chr13 55891559 55891721 -64392591 - B2_Mm2 SINE B2 -26 169 3 9 1011 273 29 0 0 chr13 55891982 55892016 -64392296 + (T)n Simple_repeat Simple_repeat 1 34 0 9 1011 829 200 49 22 chr13 55892048 55892232 -64392080 - B3A SINE B2 0 198 10 9 1011 385 299 104 30 chr13 55892349 55892618 -64391694 + L1MA4A LINE L1 2740 3028 -3115 9 1011 318 269 79 24 chr13 55892943 55893112 -64391200 + L1_Mur3 LINE L1 3250 3422 -2455 9 1011 21 0 0 0 chr13 55893424 55893445 -64390867 + AT_rich Low_complexity Low_complexity 1 21 0 9 1011 23 0 0 0 chr13 55893513 55893536 -64390776 + AT_rich Low_complexity Low_complexity 1 23 0 9 1011 865 325 158 18 chr13 55893547 55894389 -64389923 + L1_Mur3 LINE L1 3407 4366 -1514 9 1011 313 309 85 23 chr13 55894445 55894574 -64389738 + RSINE1 SINE B4 29 165 0 9 1011 1010 280 30 32 chr13 55894586 55894972 -64389340 + L1_Rod LINE L1 4490 4888 -998 9 1011 659 296 103 11 chr13 55894972 55895235 -64389077 + B4A SINE B4 2 288 -4 9 1011 1010 276 25 33 chr13 55895235 55895265 -64389047 + L1_Rod LINE L1 4856 4882 -965 9 1011 434 200 27 14 chr13 55895266 55895413 -64388899 + (CATA)n Simple_repeat Simple_repeat 2 150 0 9 1011 612 299 80 64 chr13 55895413 55895950 -64388362 + L1MA4A LINE L1 4906 5433 -864 9 1011 763 249 11 25 chr13 55895956 55896163 -64388149 + B3A SINE B2 1 188 -7 9 1011 225 291 0 0 chr13 55896166 55896221 -64388091 + L1_Rod LINE L1 5371 5425 -422 9 1011 1178 288 35 2 chr13 55896349 55896750 -64387562 + L1MA4A LINE L1 5487 5900 -403 9 1011 462 36 0 0 chr13 55896800 55896856 -64387456 + (CA)n Simple_repeat Simple_repeat 1 56 0 9 1011 334 294 83 6 chr13 55896982 55897163 -64387149 + L1M5 LINE L1 2822 3016 -3130 9 1011 298 261 94 141 chr13 55897282 55897408 -64386904 + L1M4 LINE L1 3899 3995 -2151 9 1011 1109 189 19 19 chr13 55897408 55897623 -64386689 + B3 SINE B2 1 215 -1 9 1011 298 261 94 141 chr13 55897623 55897773 -64386539 + L1M4 LINE L1 3996 4162 -1984 9 1011 541 222 6 6 chr13 55897817 55897989 -64386323 + (CA)n Simple_repeat Simple_repeat 2 173 0 9 1011 277 268 12 24 chr13 55898010 55898094 -64386218 + ID4_ SINE ID 1 83 0 9 1011 470 299 63 52 chr13 55898127 55898348 -64385964 + L1M5 LINE L1 3029 3264 -2882 9 1011 768 201 0 7 chr13 55898396 55898541 -64385771 + RSINE1 SINE B4 4 147 -18 9 1011 251 0 0 109 chr13 55898709 55898764 -64385548 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 9 1011 804 235 56 6 chr13 55900593 55900773 -64383539 + B3 SINE B2 1 189 -27 9 1011 924 36 0 0 chr13 55900876 55900988 -64383324 + (TTTC)n Simple_repeat Simple_repeat 3 114 0 9 1011 1172 56 0 0 chr13 55900989 55901133 -64383179 - B1_Mus1 SINE Alu -1 147 4 9 1011 2343 107 0 0 chr13 55901965 55902292 -64382020 + ORR1A2 LTR MaLR 1 327 0 9 1011 1644 157 157 3 chr13 55902979 55903311 -64381001 - ORR1C2 LTR MaLR 0 384 2 9 1011 5218 205 56 54 chr13 55903312 55904010 -64380302 - ORR1C2-int LTR MaLR 0 1370 659 9 1011 1254 99 20 25 chr13 55904010 55904206 -64380106 - B2_Mm2 SINE B2 0 195 1 9 1011 5218 205 56 54 chr13 55904206 55904872 -64379440 - ORR1C2-int LTR MaLR -712 658 4 9 1011 764 204 0 13 chr13 55904872 55905021 -64379291 - B1_Mus1 SINE Alu 0 148 2 9 1011 1481 160 99 10 chr13 55905030 55905333 -64378979 - ORR1C2 LTR MaLR 0 384 55 9 1011 369 0 0 0 chr13 55905335 55905376 -64378936 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1011 375 176 135 0 chr13 55905386 55905460 -64378852 - B1_Mur3 SINE Alu -65 84 1 9 1011 321 89 0 0 chr13 55905964 55906009 -64378303 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 9 1011 245 311 0 26 chr13 55906014 55906090 -64378222 - MIRm SINE MIR -15 261 188 9 1011 437 34 0 17 chr13 55907222 55907282 -64377030 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 1011 24 32 0 0 chr13 55907935 55907966 -64376346 + AT_rich Low_complexity Low_complexity 1 31 0 9 1011 1178 77 0 12 chr13 55908029 55908199 -64376113 - B2_Mm2 SINE B2 -27 168 1 9 1011 243 180 0 0 chr13 55908446 55908487 -64375825 + T-rich Low_complexity Low_complexity 10 50 0 9 1011 1137 68 0 0 chr13 55908487 55908634 -64375678 - B1_Mus2 SINE Alu 0 147 1 9 1011 240 228 0 0 chr13 55908655 55908712 -64375600 + CT-rich Low_complexity Low_complexity 2 58 0 9 1011 1170 61 0 0 chr13 55908716 55908864 -64375448 - B1_Mus1 SINE Alu 0 148 1 9 1011 1327 75 43 0 chr13 55908864 55909050 -64375262 - B2_Mm2 SINE B2 0 195 1 9 1011 297 0 0 0 chr13 55912011 55912044 -64372268 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 9 1011 938 129 7 7 chr13 55913472 55913620 -64370692 - B1_Mur4 SINE Alu 0 150 3 9 1011 271 97 48 0 chr13 55913822 55913842 -64370470 + (CAGA)n Simple_repeat Simple_repeat 2 21 0 9 1011 501 32 0 0 chr13 55913842 55913905 -64370407 + (CA)n Simple_repeat Simple_repeat 2 64 0 9 1011 271 97 48 0 chr13 55913905 55913946 -64370366 + (CAGA)n Simple_repeat Simple_repeat 2 45 0 9 1011 776 206 0 33 chr13 55913978 55914115 -64370197 + B1_Mm SINE Alu 2 135 -12 9 1011 182 37 0 36 chr13 55914115 55914143 -64370169 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1011 776 206 0 33 chr13 55914143 55914156 -64370156 + B1_Mm SINE Alu 136 147 0 9 1011 233 347 31 31 chr13 55914595 55914693 -64369619 - MIRc SINE MIR -106 162 65 1 1011 261 0 0 0 chr13 55914956 55914985 -64369327 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 1 1011 191 36 36 0 chr13 55915425 55915453 -64368859 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1 1011 1002 181 0 0 chr13 55915563 55916038 -64368274 + (CA)n Simple_repeat Simple_repeat 1 475 0 1 1011 187 284 27 32 chr13 55916905 55917048 -64367264 + L2c LINE L2 3050 3194 -193 1 1011 227 246 0 32 chr13 55918984 55919021 -64365291 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1011 192 40 0 0 chr13 55919021 55919046 -64365266 + (TCTCTG)n Simple_repeat Simple_repeat 6 30 0 1 1011 227 246 0 32 chr13 55919046 55919071 -64365241 + (TG)n Simple_repeat Simple_repeat 1 25 0 1 1011 414 0 0 0 chr13 55919090 55919136 -64365176 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1011 279 0 0 0 chr13 55919136 55919166 -64365146 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1011 683 168 69 0 chr13 55919375 55919506 -64364806 - B1_Mur1 SINE Alu -8 141 2 1 1011 571 281 135 46 chr13 55920162 55920685 -64363627 - L1MB3 LINE L1 -15 6168 5600 1 1011 1116 159 0 2 chr13 55920686 55921189 -64363123 + (TG)n Simple_repeat Simple_repeat 1 501 0 1 1011 811 260 93 11 chr13 55921192 55921460 -64362852 - B4 SINE B4 -1 291 2 1 1011 373 263 115 24 chr13 55921533 55921763 -64362549 - L1MB3 LINE L1 -645 5526 5274 1 1011 405 0 0 0 chr13 55921778 55921823 -64362489 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1011 201 304 0 0 chr13 55921841 55921897 -64362415 + GA-rich Low_complexity Low_complexity 5 60 0 1 1011 333 0 0 0 chr13 55922182 55922219 -64362093 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 1011 216 0 0 0 chr13 55922219 55922242 -64362070 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1011 234 81 0 0 chr13 55922242 55922279 -64362033 + (GA)n Simple_repeat Simple_repeat 1 37 0 1 1011 198 313 30 0 chr13 55922842 55922909 -64361403 + MIRc SINE MIR 40 108 -160 1 1011 831 251 85 0 chr13 55923329 55923528 -64360784 + ID_B1 SINE B4 8 223 -1 1 1011 200 116 45 23 chr13 55923540 55923584 -64360728 + (CAAA)n Simple_repeat Simple_repeat 1 45 0 1 1011 198 103 0 0 chr13 55927176 55927205 -64357107 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1011 198 0 0 0 chr13 55931478 55931500 -64352812 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1011 219 114 0 0 chr13 55932704 55932739 -64351573 + (CGAG)n Simple_repeat Simple_repeat 4 38 0 1 1011 285 109 0 0 chr13 55932774 55932820 -64351492 + (TCCC)n Simple_repeat Simple_repeat 2 47 0 1 1011 208 286 0 0 chr13 55932852 55932915 -64351397 + C-rich Low_complexity Low_complexity 1 63 0 1 1011 308 245 35 44 chr13 55939269 55939372 -64344940 + MIRb SINE MIR 74 177 -85 1 1011 1479 42 0 25 chr13 55940331 55940527 -64343785 + B2_Mm1t SINE B2 3 193 0 1 1011 231 234 0 30 chr13 55941381 55941447 -64342865 + ID4 SINE ID 2 65 -18 1 1011 211 205 0 0 chr13 55941535 55941574 -64342738 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 1 1011 185 298 30 50 chr13 55942849 55942948 -64341364 - MIRb SINE MIR -122 146 50 1 1011 209 231 0 0 chr13 55944594 55944633 -64339679 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1011 1004 198 37 46 chr13 55944656 55944873 -64339439 - B3 SINE B2 0 216 2 1 1011 813 111 0 23 chr13 55944984 55945113 -64339199 - B1_Mm SINE Alu -21 126 1 1 1011 493 171 0 103 chr13 55945011 55945128 -64339184 - MT2B LTR ERVL -344 257 153 1 1011 868 266 10 10 chr13 55945148 55945353 -64338959 + B3 SINE B2 1 205 -11 1 1011 517 274 150 16 chr13 55945396 55945589 -64338723 + ID_B1 SINE B4 1 219 -5 1 1011 436 302 54 105 chr13 55945748 55945906 -64338406 + L1MD2 LINE L1 5803 5951 -408 1 1011 271 179 232 0 chr13 55945906 55945962 -64338350 - ID4_ SINE ID -10 73 5 1 1011 436 302 54 105 chr13 55945962 55946099 -64338213 + L1MD2 LINE L1 5952 6083 -276 1 1011 237 302 39 78 chr13 55946133 55946262 -64338050 + RMER15 LTR ERVL 1 124 -451 1 1011 730 259 38 38 chr13 55946304 55946569 -64337743 + RMER15 LTR ERVL 296 560 -15 1 1011 237 263 103 21 chr13 55946611 55946708 -64337604 + L1MC4a LINE L1 7738 7842 -40 1 1011 346 332 73 50 chr13 55951084 55951344 -64332968 + L1ME4a LINE L1 5654 5919 -205 1 1011 404 82 0 16 chr13 55951344 55951387 -64332925 + (TTC)n Simple_repeat Simple_repeat 3 45 0 1 1011 1028 136 6 0 chr13 55951387 55951563 -64332749 + (TCTCCC)n Simple_repeat Simple_repeat 4 180 0 1 1011 404 82 0 16 chr13 55951563 55951581 -64332731 + (TTC)n Simple_repeat Simple_repeat 3 20 0 1 1011 190 55 0 53 chr13 55951572 55951610 -64332702 + (TCCCC)n Simple_repeat Simple_repeat 3 38 0 1 1011 681 266 0 12 chr13 55951632 55951792 -64332520 - RSINE1 SINE B4 0 165 8 1 1011 306 299 92 28 chr13 55953234 55953375 -64330937 - MIR SINE MIR -11 251 102 1 1011 1066 116 175 26 chr13 55954105 55954299 -64330013 + URR1B DNA MER1_type 3 225 0 1 1011 756 320 70 9 chr13 55954353 55954681 -64329631 - MLT1C LTR MaLR -21 446 99 1 1011 857 172 15 0 chr13 55955633 55955767 -64328545 - B1_Mur2 SINE Alu -13 136 1 1 1011 423 298 62 21 chr13 55955785 55955929 -64328383 - RSINE1 SINE B4 0 165 16 1 1011 253 281 98 56 chr13 55956691 55956834 -64327478 - MER96B DNA hAT -184 233 85 1 1011 22 0 0 0 chr13 55957332 55957354 -64326958 + AT_rich Low_complexity Low_complexity 1 22 0 1 1011 192 300 0 0 chr13 55959329 55959379 -64324933 + L3 LINE CR1 3716 3765 -724 1 1011 22 0 0 0 chr13 55960491 55960513 -64323799 + AT_rich Low_complexity Low_complexity 1 22 0 1 1011 1177 62 0 7 chr13 55960922 55961068 -64323244 + B1_Mus2 SINE Alu 2 146 -1 1 1011 1200 98 0 0 chr13 55962863 55963036 -64321276 + (TTCTC)n Simple_repeat Simple_repeat 2 174 0 1 1011 987 88 25 6 chr13 55963041 55963201 -64321111 + (TTTCC)n Simple_repeat Simple_repeat 4 166 0 1 1011 200 368 89 19 chr13 55963318 55963476 -64320836 - MIRb SINE MIR -34 234 66 1 1011 286 245 15 48 chr13 55964031 55964130 -64320182 - B1_Mur2 SINE Alu -10 139 46 1 1011 228 250 42 42 chr13 55964507 55964578 -64319734 - MIR SINE MIR -180 82 12 1 1011 264 214 28 28 chr13 55966159 55966231 -64318081 + CT-rich Low_complexity Low_complexity 3 74 0 1 1011 996 215 27 90 chr13 55966283 55966584 -64317728 - B4 SINE B4 -10 282 1 1 1011 214 264 19 0 chr13 55966649 55966702 -64317610 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1011 1042 255 61 29 chr13 55966716 55966995 -64317317 - B4A SINE B4 -4 288 1 1 1011 1214 48 0 20 chr13 55967173 55967322 -64316990 - B1_Mm SINE Alu 0 147 2 1 1011 753 224 52 12 chr13 55967329 55967501 -64316811 + B3 SINE B2 38 216 0 1 1011 253 263 134 21 chr13 55967548 55967645 -64316667 - B4A SINE B4 -71 221 114 1 1011 546 112 0 0 chr13 55967620 55967700 -64316612 + RLTR26 LTR ERVK 559 638 -4 1 126 766 326 88 19 chr13 55967702 55968108 -64316204 - Lx9 LINE L1 -182 7462 6973 1 1012 258 32 0 0 chr13 55968822 55968853 -64315459 + (CCCCCA)n Simple_repeat Simple_repeat 5 35 0 1 1012 825 11 0 0 chr13 55970191 55970285 -64314027 + (TTTC)n Simple_repeat Simple_repeat 2 95 0 1 1012 1659 228 52 3 chr13 55970285 55970668 -64313644 + MTD LTR MaLR 15 416 -3 1 1012 326 314 69 0 chr13 55970674 55970776 -64313536 - ID_B1 SINE B4 -32 192 84 1 1012 368 183 0 40 chr13 55970703 55970777 -64313535 - B1F SINE Alu -77 72 2 1 1012 411 172 183 0 chr13 55971436 55971467 -64312845 - B3 SINE B2 -2 214 169 1 1012 417 39 0 0 chr13 55971467 55971518 -64312794 + (TATG)n Simple_repeat Simple_repeat 4 54 0 1 1012 411 172 183 0 chr13 55971518 55971579 -64312733 - B3 SINE B2 -48 168 106 1 1012 712 220 50 0 chr13 55972486 55972627 -64311685 - B1_Mur1 SINE Alu 0 149 2 1 1012 752 220 75 58 chr13 55972858 55973032 -64311280 + B3A SINE B2 2 181 -17 1 1012 495 0 0 0 chr13 55973032 55973087 -64311225 + (TA)n Simple_repeat Simple_repeat 1 55 0 1 1012 752 220 75 58 chr13 55973087 55973100 -64311212 + B3A SINE B2 182 192 -6 1 1012 715 253 82 6 chr13 55973702 55973885 -64310427 - B3A SINE B2 0 198 2 1 1012 497 317 125 63 chr13 55974523 55974583 -64309729 - HAL1 LINE L1 -312 2195 2135 1 1012 299 216 81 0 chr13 55974583 55974657 -64309655 - ID4_ SINE ID -3 80 1 1 1012 497 317 125 63 chr13 55974657 55974923 -64309389 - HAL1 LINE L1 -373 2134 1841 1 1012 759 232 39 22 chr13 55974923 55975104 -64309208 - B2_Mm2 SINE B2 -10 185 2 1 1012 497 317 125 63 chr13 55975104 55975133 -64309179 - HAL1 LINE L1 -667 1840 1805 1 1012 1033 225 14 23 chr13 55975133 55975351 -64308961 - B3 SINE B2 0 216 1 1 1012 497 317 125 63 chr13 55975351 55975849 -64308463 - HAL1 LINE L1 -703 1804 1288 1 1012 379 288 90 16 chr13 55975850 55976022 -64308290 - B3A SINE B2 -2 193 7 1 1012 347 281 34 0 chr13 55976029 55976118 -64308194 - PB1D10 SINE Alu -8 109 18 1 1012 306 0 0 0 chr13 55976988 55977022 -64307290 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1012 401 53 0 18 chr13 55977116 55977173 -64307139 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1012 248 291 175 19 chr13 55977178 55977332 -64306980 - HAL1 LINE L1 -1938 569 392 1 1012 328 344 90 22 chr13 55977425 55977559 -64306753 - HAL1 LINE L1 -2266 241 99 1 1012 691 218 7 14 chr13 55977653 55977797 -64306515 + B1_Mur1 SINE Alu 7 149 0 1 1012 864 198 0 84 chr13 55977804 55978019 -64306293 + B3A SINE B2 2 198 0 1 1012 282 299 129 14 chr13 55978788 55978927 -64305385 + YREP_Mm Unknown Unknown 140 294 -1518 1 1012 548 250 66 0 chr13 55978815 55978951 -64305361 - ID_B1 SINE B4 0 224 80 1 1012 303 28 0 0 chr13 55980687 55980723 -64303589 + (TATG)n Simple_repeat Simple_repeat 1 36 0 1 1012 253 257 54 0 chr13 55982547 55982621 -64301691 - MIR3 SINE MIR -32 176 99 1 1012 318 305 50 4 chr13 55983740 55983864 -64300448 + MIR SINE MIR 37 167 -101 1 1012 568 108 15 23 chr13 55984317 55984450 -64299862 + (TA)n Simple_repeat Simple_repeat 2 133 0 1 1012 378 294 18 18 chr13 55984450 55984561 -64299751 - RSINE1 SINE B4 -34 131 21 1 1012 234 340 120 0 chr13 55986075 55986175 -64298137 + MIRm SINE MIR 27 138 -138 1 1012 414 69 0 0 chr13 55987469 55987527 -64296785 + (TG)n Simple_repeat Simple_repeat 1 58 0 1 1012 660 271 13 0 chr13 55987527 55987678 -64296634 - B3A SINE B2 -44 154 2 1 1012 345 231 114 16 chr13 55987678 55987801 -64296511 - Tigger7 DNA MER2_type -120 2371 2238 1 1012 833 270 144 52 chr13 55987789 55988156 -64296156 - Tigger7 DNA MER2_type -2079 412 12 1 1012 183 100 0 0 chr13 55989262 55989292 -64295020 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1012 195 307 13 26 chr13 55989704 55989781 -64294531 + L2c LINE L2 3302 3377 -10 1 1012 188 351 0 0 chr13 55990756 55990813 -64293499 + MIRb SINE MIR 24 80 -188 1 1012 1556 175 63 139 chr13 55991356 55991767 -64292545 - ORR1C2 LTR MaLR -4 380 1 1 1012 237 349 55 9 chr13 55992719 55992829 -64291483 - MER103 DNA DNA -10 156 42 1 1012 197 235 39 0 chr13 55993351 55993402 -64290910 + MER5B DNA MER1_type 4 56 -122 1 1012 203 176 0 0 chr13 55993402 55993436 -64290876 + (CCA)n Simple_repeat Simple_repeat 1 34 0 1 1012 729 230 147 23 chr13 55995464 55995682 -64288630 + MTD LTR MaLR 27 271 -148 1 1012 271 258 183 0 chr13 55997174 55997294 -64287018 + MTEa LTR MaLR 196 337 -42 1 1012 2858 129 43 9 chr13 55997305 55997743 -64286569 - RLTR11B LTR ERVK 0 453 1 1 1012 195 239 87 0 chr13 55997884 55997930 -64286382 + MIRc SINE MIR 91 140 -128 1 1012 307 328 29 22 chr13 55999861 55999998 -64284314 + MIRb SINE MIR 27 164 -104 1 1012 309 233 70 0 chr13 56000000 56000086 -64284226 + MIRb SINE MIR 171 262 -6 1 1012 1009 89 13 13 chr13 56000721 56000880 -64283432 + (TTTC)n Simple_repeat Simple_repeat 2 160 0 2 1012 232 282 35 23 chr13 56002278 56002365 -64281947 + MIRc SINE MIR 62 149 -119 3 1012 186 267 125 14 chr13 56004603 56004701 -64279611 - MIR SINE MIR -29 239 127 4 1012 568 191 17 25 chr13 56005253 56005371 -64278941 + PB1D9 SINE Alu 2 118 -2 5 1012 728 212 148 11 chr13 56006514 56006797 -64277515 + MTD LTR MaLR 65 414 -5 6 1012 1489 81 126 17 chr13 56007110 56007349 -64276963 + ORR1A2 LTR MaLR 55 319 -8 7 1012 1313 99 5 5 chr13 56009081 56009273 -64275039 + B2_Mm2 SINE B2 1 192 -3 8 1012 3118 209 122 30 chr13 56009279 56010039 -64274273 + Lx9 LINE L1 6669 7495 -149 9 1012 273 57 0 0 chr13 56010039 56010074 -64274238 + (TATG)n Simple_repeat Simple_repeat 3 37 0 1 1012 3118 209 122 30 chr13 56010074 56010161 -64274151 + Lx9 LINE L1 7496 7593 -51 9 1012 279 0 0 0 chr13 56010693 56010724 -64273588 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1012 499 274 31 32 chr13 56011987 56012190 -64272122 + MIRb SINE MIR 2 216 -52 1 1012 869 297 77 61 chr13 56012322 56012892 -64271420 - L1MA5 LINE L1 -1 6299 5721 1 1012 216 0 0 0 chr13 56014351 56014375 -64269937 + (GGGAA)n Simple_repeat Simple_repeat 5 28 0 1 1012 356 373 63 89 chr13 56015405 56015517 -64268795 - L1MC4a LINE L1 -1987 5895 5785 1 1012 489 47 0 0 chr13 56015517 56015581 -64268731 + (CATA)n Simple_repeat Simple_repeat 4 67 0 1 1012 356 373 63 89 chr13 56015581 56015962 -64268350 - L1MC4a LINE L1 -2098 5784 5416 1 1012 240 250 52 10 chr13 56016218 56016315 -64267997 + (TG)n Simple_repeat Simple_repeat 1 101 0 1 1012 183 184 0 0 chr13 56021603 56021641 -64262671 + G-rich Low_complexity Low_complexity 5 42 0 1 1012 187 212 96 36 chr13 56023813 56023896 -64260416 - MIRm SINE MIR -138 138 51 1 1012 566 310 26 26 chr13 56025633 56025822 -64258490 - MER5A DNA MER1_type 0 189 1 2 1012 22 0 0 0 chr13 56027735 56027757 -64256555 + AT_rich Low_complexity Low_complexity 1 22 0 2 1012 1760 47 9 0 chr13 56027997 56028230 -64256082 - ORR1A2 LTR MaLR -8 319 85 2 1012 584 269 89 81 chr13 56028234 56028442 -64255870 - Charlie1a DNA MER1_type -75 1380 1171 2 1012 600 285 14 48 chr13 56028442 56028652 -64255660 - B3 SINE B2 -13 203 1 2 1012 584 269 89 81 chr13 56028652 56028824 -64255488 - Charlie1a DNA MER1_type -285 1170 997 2 1012 1082 319 51 38 chr13 56028894 56029344 -64254968 - Charlie1a DNA MER1_type -623 832 377 2 1012 313 346 54 54 chr13 56029854 56030077 -64254235 + MLT1F2 LTR MaLR 273 495 -65 2 1012 669 245 46 0 chr13 56030172 56030323 -64253989 - RSINE1 SINE B4 0 165 8 2 1012 332 279 0 23 chr13 56030535 56030623 -64253689 - B4A SINE B4 -206 86 1 2 1012 281 287 179 32 chr13 56032963 56032994 -64251318 + ORR1E LTR MaLR 8 42 -328 2 1012 207 0 0 0 chr13 56032994 56033017 -64251295 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1012 519 257 56 75 chr13 56033017 56033251 -64251061 + ORR1E LTR MaLR 43 297 -62 2 1012 404 236 17 43 chr13 56033275 56033390 -64250922 + ORR1E LTR MaLR 260 371 -8 2 1012 516 59 0 0 chr13 56034351 56034419 -64249893 + (CA)n Simple_repeat Simple_repeat 2 69 0 3 1012 2244 254 71 61 chr13 56034428 56035258 -64249054 + Lx8 LINE L1 6197 7034 -439 3 1012 273 246 56 0 chr13 56039926 56040006 -64244306 - B1_Mur1 SINE Alu -2 147 61 3 1012 249 33 0 0 chr13 56040268 56040298 -64244014 + (TCC)n Simple_repeat Simple_repeat 2 31 0 3 1012 824 34 5 78 chr13 56040301 56040494 -64243818 + (TTC)n Simple_repeat Simple_repeat 2 180 0 3 1012 260 321 52 26 chr13 56041001 56041116 -64243196 + MIR SINE MIR 73 190 -72 3 1012 318 50 0 0 chr13 56041195 56041235 -64243077 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1012 219 318 21 54 chr13 56041471 56041487 -64242825 - B4A SINE B4 -202 90 1 3 1012 399 247 0 0 chr13 56041487 56041564 -64242748 - ID4 SINE ID -6 77 1 3 1012 673 241 137 5 chr13 56041564 56041764 -64242548 - B4A SINE B4 -65 227 1 3 1012 569 323 39 21 chr13 56041815 56042049 -64242263 - MLT1D-int LTR MaLR -417 1072 835 4 1012 213 226 0 0 chr13 56042206 56042259 -64242053 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 1012 318 123 0 0 chr13 56042258 56042315 -64241997 + (GA)n Simple_repeat Simple_repeat 1 57 0 4 1012 652 302 7 0 chr13 56042376 56042525 -64241787 - RSINE1 SINE B4 -13 152 3 4 1012 204 40 0 0 chr13 56042595 56042620 -64241692 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1012 358 319 94 56 chr13 56042637 56043179 -64241133 - MLT1D-int LTR MaLR -993 496 5 4 1012 894 310 106 41 chr13 56043184 56043626 -64240686 - MLT1D LTR MaLR -1 466 12 4 1012 401 269 124 12 chr13 56044054 56044223 -64240089 + MER3 DNA MER1_type 22 209 0 4 1012 242 268 0 14 chr13 56046403 56046475 -64237837 + (TCCA)n Simple_repeat Simple_repeat 2 72 0 4 1012 260 286 64 13 chr13 56046479 56046557 -64237755 - L2a LINE L2 -33 3393 3312 4 1012 1032 206 50 5 chr13 56047358 56047558 -64236754 - B3 SINE B2 -7 209 1 4 1012 248 298 52 21 chr13 56047642 56047738 -64236574 + Charlie5 DNA MER1_type 1 99 -2525 4 1012 700 100 53 9 chr13 56047746 56047876 -64236436 + B1_Mus1 SINE Alu 9 149 0 5 1012 940 313 49 19 chr13 56047964 56048329 -64235983 + Charlie5 DNA MER1_type 2242 2617 -7 4 1012 207 0 0 0 chr13 56049530 56049553 -64234759 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1012 299 85 21 0 chr13 56050485 56050532 -64233780 + (TATG)n Simple_repeat Simple_repeat 4 51 0 5 1012 519 249 2 17 chr13 56051490 56051638 -64232674 - MTEb LTR MaLR -2 377 235 5 1012 192 179 0 0 chr13 56051641 56051680 -64232632 + GA-rich Low_complexity Low_complexity 5 43 0 5 1012 706 249 16 43 chr13 56051693 56051878 -64232434 - B3A SINE B2 -18 180 1 5 1012 1078 194 13 47 chr13 56052033 56052266 -64232046 + MTC LTR MaLR 2 226 -195 5 1012 546 220 147 23 chr13 56052279 56052456 -64231856 - RLTR12B LTR ERVK -283 245 47 5 1012 939 154 24 0 chr13 56053930 56054099 -64230213 + URR1A DNA MER1_type 47 219 -7 5 1012 308 316 31 25 chr13 56053958 56054120 -64230192 - CYRA11_Mm Unknown Y-chromosome -297 320 158 5 1012 575 238 34 108 chr13 56054266 56054504 -64229808 - B3A SINE B2 -2 214 1 6 1012 597 262 226 31 chr13 56055219 56055507 -64228805 + ORR1D2 LTR MaLR 10 353 -17 6 1012 365 364 85 40 chr13 56055494 56055766 -64228546 + MER82 DNA MER2_type 360 643 -10 6 1012 278 313 79 25 chr13 56056621 56056826 -64227486 + MIRc SINE MIR 29 245 -23 6 1012 423 0 0 0 chr13 56056833 56056880 -64227432 + (TA)n Simple_repeat Simple_repeat 2 48 0 6 1012 468 91 0 0 chr13 56061214 56061280 -64223032 + (TA)n Simple_repeat Simple_repeat 1 66 0 6 1012 732 123 0 0 chr13 56062185 56062299 -64222013 + (TTC)n Simple_repeat Simple_repeat 1 114 0 6 1012 406 233 43 110 chr13 56065316 56065338 -64218974 + B4A SINE B4 72 221 -68 6 1012 1010 72 0 0 chr13 56065338 56065477 -64218835 + B1_Mus1 SINE Alu 9 147 -1 6 1012 920 153 120 8 chr13 56068991 56069197 -64215115 - Lx2 LINE L1 0 7008 6776 6 1012 406 319 50 23 chr13 56069807 56070028 -64214284 - L1MC4 LINE L1 -975 7067 6841 7 1012 337 335 59 68 chr13 56070357 56070594 -64213718 - L1MC4 LINE L1 -1541 6341 6107 7 1012 289 294 0 34 chr13 56070697 56070785 -64213527 - ORR1D-int LTR MaLR -440 930 846 7 1012 350 262 110 77 chr13 56070915 56070930 -64213382 - B2_Mm2 SINE B2 -5 190 172 7 1012 396 0 0 0 chr13 56070930 56070974 -64213338 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1012 575 254 72 22 chr13 56070974 56071140 -64213172 - B3A SINE B2 -24 171 3 7 1012 487 307 63 57 chr13 56071437 56071819 -64212493 + Charlie1b DNA MER1_type 14 394 -129 7 1012 781 296 29 0 chr13 56072173 56072379 -64211933 - B3 SINE B2 -1 215 4 7 1012 946 172 91 0 chr13 56072898 56073084 -64211228 - B3 SINE B2 -8 208 6 7 1012 667 330 185 8 chr13 56073089 56073560 -64210752 - L1MC4 LINE L1 -4737 1478 925 7 1012 1190 189 3 77 chr13 56074283 56074569 -64209743 - RLTR31_Mur LTR ERVK 0 553 289 7 1012 898 91 61 0 chr13 56074571 56074703 -64209609 + B2_Mm2 SINE B2 1 140 -55 7 1012 1175 172 22 152 chr13 56074706 56075028 -64209284 - RLTR31_Mm LTR ERVK -281 280 1 8 1012 502 141 172 0 chr13 56075185 56075284 -64209028 - PB1D10 SINE Alu -1 116 1 8 1012 24 53 0 0 chr13 56076095 56076133 -64208179 + AT_rich Low_complexity Low_complexity 1 38 0 8 1012 351 0 0 0 chr13 56076244 56076283 -64208029 + (CA)n Simple_repeat Simple_repeat 1 39 0 8 1012 198 103 0 0 chr13 56076283 56076312 -64208000 + (CCA)n Simple_repeat Simple_repeat 1 29 0 8 1012 354 291 80 22 chr13 56077224 56077361 -64206951 + MIRb SINE MIR 2 146 -122 8 1012 1482 220 23 57 chr13 56079564 56079950 -64204362 - ORR1D1 LTR MaLR -1 373 1 8 1012 185 236 18 35 chr13 56081064 56081121 -64203191 - MER5A DNA MER1_type -123 66 11 8 1012 288 310 27 3 chr13 56081183 56081297 -64203015 - MIR SINE MIR -119 149 36 8 1012 582 15 0 0 chr13 56083079 56083146 -64201166 + (GA)n Simple_repeat Simple_repeat 1 67 0 8 1012 261 0 0 0 chr13 56083414 56083443 -64200869 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 1012 245 130 56 0 chr13 56084712 56084766 -64199546 + (CACCC)n Simple_repeat Simple_repeat 1 57 0 9 1012 226 297 81 28 chr13 56089097 56089260 -64195052 + MIRb SINE MIR 15 184 -84 9 1012 202 334 0 0 chr13 56090085 56090164 -64194148 + MIR SINE MIR 179 261 -7 9 1012 21 0 0 0 chr13 56090364 56090385 -64193927 + AT_rich Low_complexity Low_complexity 1 21 0 9 1012 477 174 0 0 chr13 56091064 56091162 -64193150 + (TG)n Simple_repeat Simple_repeat 2 99 0 9 1012 303 303 103 27 chr13 56091450 56091596 -64192716 - MIR SINE MIR -2 260 104 9 1012 202 274 116 23 chr13 56093937 56094023 -64190289 - MIR SINE MIR -91 117 24 9 1012 353 265 61 109 chr13 56096082 56096247 -64188065 + Charlie22a DNA MER1_type 70 226 -265 9 1012 183 80 0 0 chr13 56097406 56097431 -64186881 + (CA)n Simple_repeat Simple_repeat 1 25 0 9 1012 242 298 75 22 chr13 56097547 56097681 -64186631 - L2a LINE L2 -252 3174 3034 9 1012 460 216 52 0 chr13 56097981 56098097 -64186215 - MER5A DNA MER1_type -67 122 1 9 1013 305 268 90 49 chr13 56100270 56100389 -64183923 - MLT1A1 LTR MaLR -7 460 272 1 1013 898 197 14 29 chr13 56100449 56100646 -64183666 - ORR1D1 LTR MaLR -3 371 178 1 1013 1118 106 0 0 chr13 56100646 56100806 -64183506 + B2_Mm2 SINE B2 2 161 -34 1 1013 518 183 9 0 chr13 56100809 56100924 -64183388 + (TA)n Simple_repeat Simple_repeat 1 116 0 1 1013 603 156 49 8 chr13 56100976 56101099 -64183213 - ORR1D1 LTR MaLR -242 128 1 1 1013 188 255 0 38 chr13 56101725 56101778 -64182534 + L2a LINE L2 3374 3424 -2 1 1013 234 272 24 47 chr13 56102554 56102639 -64181673 + B1_Mur2 SINE Alu 23 105 -44 1 1013 244 270 0 0 chr13 56102691 56102754 -64181558 + GA-rich Low_complexity Low_complexity 2 64 0 1 1013 1135 51 0 0 chr13 56102841 56102979 -64181333 - B1_Mm SINE Alu -8 139 2 1 1013 680 78 25 17 chr13 56104051 56104169 -64180143 + (GGGA)n Simple_repeat Simple_repeat 1 119 0 1 1013 353 20 0 39 chr13 56104212 56104263 -64180049 + (TATG)n Simple_repeat Simple_repeat 1 49 0 1 1013 282 306 67 26 chr13 56104898 56105044 -64179268 + MIRb SINE MIR 67 210 -58 1 1013 269 268 82 10 chr13 56110149 56110247 -64174065 - MLT1E2 LTR MaLR -136 491 387 1 1013 268 311 0 11 chr13 56110981 56111072 -64173240 + MER3 DNA MER1_type 120 209 0 1 1013 1316 253 72 33 chr13 56112920 56113309 -64171003 + MTD LTR MaLR 18 405 -14 1 1013 237 356 144 19 chr13 56114744 56114976 -64169336 + MIRb SINE MIR 10 262 0 1 1013 377 216 88 82 chr13 56115180 56115351 -64168961 + L1MEg LINE L1 24 195 -6228 1 1013 189 224 0 0 chr13 56115420 56115478 -64168834 + GA-rich Low_complexity Low_complexity 3 60 0 1 1013 497 219 6 0 chr13 56115491 56115651 -64168661 + GA-rich Low_complexity Low_complexity 2 162 0 1 1013 329 304 159 20 chr13 56115651 56115846 -64168466 + L1MEg LINE L1 229 450 -5973 1 1013 413 81 16 0 chr13 56116372 56116434 -64167878 + (GA)n Simple_repeat Simple_repeat 1 63 0 1 1013 702 247 47 57 chr13 56116434 56116466 -64167846 - ORR1E LTR MaLR -168 191 164 1 1013 3112 61 15 0 chr13 56116466 56116860 -64167452 - MTB LTR MaLR 0 400 1 1 1013 702 247 47 57 chr13 56116860 56117020 -64167292 - ORR1E LTR MaLR -196 163 1 1 1013 555 122 0 0 chr13 56117369 56117459 -64166853 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 1013 318 327 197 5 chr13 56117459 56117662 -64166650 + L1MEg LINE L1 1547 1788 -5340 1 1013 1413 260 98 13 chr13 56117662 56118048 -64166264 + MTD LTR MaLR 1 419 0 1 1013 405 342 81 88 chr13 56118082 56118615 -64165697 + L1MEg LINE L1 1915 2462 -4575 1 1013 422 219 194 30 chr13 56118642 56118855 -64165457 + ORR1E LTR MaLR 8 255 -104 1 1013 1239 119 0 21 chr13 56119375 56119391 -64164921 - B2_Mm2 SINE B2 -9 186 172 1 1013 225 0 0 0 chr13 56119391 56119416 -64164896 + (TATG)n Simple_repeat Simple_repeat 2 26 0 1 1013 1239 119 0 21 chr13 56119416 56119588 -64164724 - B2_Mm2 SINE B2 -24 171 2 1 1013 332 208 0 10 chr13 56119716 56119813 -64164499 + (TA)n Simple_repeat Simple_repeat 2 97 0 1 1013 232 196 18 0 chr13 56119816 56119872 -64164440 + L1MEg LINE L1 2928 2984 -3957 1 1013 466 318 146 38 chr13 56119912 56120255 -64164057 + L1MD LINE L1 2203 2582 -3564 1 1013 208 200 0 30 chr13 56120490 56120557 -64163755 + CT-rich Low_complexity Low_complexity 5 69 0 1 1013 369 58 0 0 chr13 56120670 56120722 -64163590 + (TCTG)n Simple_repeat Simple_repeat 2 53 0 1 1013 345 262 7 34 chr13 56120866 56121012 -64163300 + L1MEg LINE L1 3616 3757 -3184 1 1013 2279 132 17 3 chr13 56121228 56121586 -64162726 - Lx LINE L1 -1 6653 6291 1 1013 1518 200 66 41 chr13 56121587 56121964 -64162348 + MTD LTR MaLR 28 405 -14 1 1013 375 324 142 15 chr13 56122025 56122672 -64161640 + L1MEg LINE L1 5423 6153 -788 1 1013 266 106 21 0 chr13 56122875 56122922 -64161390 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1013 716 303 44 16 chr13 56123197 56123512 -64160800 + L1MEg LINE L1 6173 6496 -463 1 1013 622 250 13 46 chr13 56123529 56123680 -64160632 + B1F SINE Alu 2 147 -2 1 1013 331 284 0 0 chr13 56123682 56123763 -64160549 + ID4 SINE ID 3 83 0 1 1013 252 338 0 12 chr13 56124103 56124184 -64160128 + ID4 SINE ID 1 80 -3 1 1013 903 241 19 14 chr13 56124328 56124543 -64159769 - B3 SINE B2 0 216 1 1 1013 417 20 0 0 chr13 56125478 56125528 -64158784 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1013 205 211 0 0 chr13 56125746 56125784 -64158528 + T-rich Low_complexity Low_complexity 1 38 0 1 1013 6277 146 82 82 chr13 56128843 56129344 -64154968 + RLTR21 LTR ERVK 1 475 -1097 1 1013 1210 36 0 0 chr13 56129344 56129482 -64154830 - B1_Mus2 SINE Alu -9 138 1 1 1013 6277 146 82 82 chr13 56129482 56130123 -64154189 + RLTR21 LTR ERVK 476 1090 -482 1 1013 351 65 0 0 chr13 56130123 56130169 -64154143 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1 1013 6277 142 19 130 chr13 56130169 56130757 -64153555 + RLTR21 LTR ERVK 1056 1572 0 1 1013 198 103 0 0 chr13 56132621 56132650 -64151662 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1013 246 176 0 0 chr13 56133241 56133292 -64151020 + G-rich Low_complexity Low_complexity 6 56 0 1 1013 278 294 29 69 chr13 56133587 56133762 -64150550 - L1MB4 LINE L1 -11 6169 6002 1 1013 241 267 17 0 chr13 56133872 56133932 -64150380 - MIR SINE MIR -187 75 15 1 1013 190 338 133 15 chr13 56135226 56135361 -64148951 + MIR SINE MIR 44 194 -68 1 1013 214 309 19 85 chr13 56135642 56135748 -64148564 - L2c LINE L2 0 3387 3289 1 1013 209 319 209 0 chr13 56135867 56135958 -64148354 + MIR SINE MIR 27 136 -126 1 1013 888 271 189 46 chr13 56137002 56137330 -64146982 + MTE2b LTR MaLR 1 375 -4 1 1013 201 154 0 0 chr13 56137899 56137938 -64146374 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1013 192 40 0 0 chr13 56137938 56137963 -64146349 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1013 345 277 182 85 chr13 56137994 56138511 -64145801 - HAL1 LINE L1 -109 2398 1832 1 1013 466 315 79 92 chr13 56138543 56138858 -64145454 - MLT1B LTR MaLR -79 311 1 1 1013 1240 113 17 0 chr13 56139767 56139944 -64144368 - B2_Mm2 SINE B2 -14 181 2 1 1013 21 57 0 0 chr13 56140143 56140178 -64144134 + AT_rich Low_complexity Low_complexity 1 35 0 1 1013 307 337 46 52 chr13 56140679 56140873 -64143439 - L1ME2 LINE L1 -46 6118 5926 1 1013 1170 260 26 8 chr13 56141401 56141668 -64142644 - B4A SINE B4 -19 273 2 1 1013 732 162 0 0 chr13 56141700 56141848 -64142464 + CT-rich Low_complexity Low_complexity 3 150 0 1 1013 404 122 54 0 chr13 56141852 56141926 -64142386 + (TCTCTG)n Simple_repeat Simple_repeat 5 82 0 1 1013 437 344 4 26 chr13 56142037 56142267 -64142045 - L1M2 LINE L1 -705 5607 5383 1 1013 1420 307 90 83 chr13 56142265 56143632 -64140680 - L1M2 LINE L1 -1133 5010 3635 1 1013 372 283 93 19 chr13 56143634 56143742 -64140570 - B3 SINE B2 -8 208 93 1 1013 277 221 63 25 chr13 56144238 56144317 -64139995 - L1MEf LINE L1 -1459 4687 4606 1 1013 498 45 61 0 chr13 56144352 56144418 -64139894 - ORR1A2 LTR MaLR 0 327 258 1 1013 3564 63 11 2 chr13 56144418 56144878 -64139434 + L1_Mus3 LINE L1 6174 6637 -1 1 1013 26 50 0 0 chr13 56145196 56145236 -64139076 + AT_rich Low_complexity Low_complexity 1 40 0 1 1013 1892 135 77 0 chr13 56145236 56145533 -64138779 - ORR1B1 LTR MaLR -55 339 20 1 1013 907 118 264 0 chr13 56145536 56145740 -64138572 - RLTR44E LTR ERVK 0 486 238 1 1013 267 303 99 0 chr13 56145755 56145907 -64138405 - L1MEf LINE L1 -1609 4537 4371 1 1013 855 325 98 48 chr13 56146308 56146790 -64137522 + MLT1F2 LTR MaLR 2 507 -53 1 1013 375 269 204 9 chr13 56146830 56147055 -64137257 - L1MEf LINE L1 -2191 3955 3687 1 1013 1317 287 72 54 chr13 56147057 56147709 -64136603 - L1MB7 LINE L1 -17 6167 5504 1 1013 252 204 0 0 chr13 56147870 56147919 -64136393 + L1M3 LINE L1 4894 4942 -1198 1 1013 266 276 46 73 chr13 56147947 56148082 -64136230 - L1M2 LINE L1 -1034 5109 4976 1 1013 1240 41 0 0 chr13 56148082 56148228 -64136084 - B1_Mus2 SINE Alu 0 147 2 1 1013 266 276 46 73 chr13 56148228 56148311 -64136001 - L1M2 LINE L1 -1168 4975 4898 1 1013 331 326 14 48 chr13 56148395 56148540 -64135772 - L1MEf LINE L1 -4871 1371 1232 1 1013 915 195 43 24 chr13 56148668 56148878 -64135434 + B3 SINE B2 3 216 0 1 1013 965 153 25 0 chr13 56148940 56149103 -64135209 + B2_Mm2 SINE B2 1 167 -28 1 1013 498 285 63 16 chr13 56149158 56149347 -64134965 + RMER15 LTR ERVL 376 573 -2 1 1013 580 299 38 68 chr13 56149973 56150146 -64134166 + Tigger7 DNA MER2_type 2235 2394 -97 1 1013 240 86 0 0 chr13 56150146 56150181 -64134131 + (TATG)n Simple_repeat Simple_repeat 1 35 0 1 1013 580 299 38 68 chr13 56150181 56150272 -64134040 + Tigger7 DNA MER2_type 2395 2491 0 1 1013 790 294 63 8 chr13 56150932 56151169 -64133143 + MTE-int LTR MaLR 3 252 -1328 1 1013 800 295 134 45 chr13 56151193 56151642 -64132670 + L1ME1 LINE L1 5677 6169 -10 1 1013 1030 293 61 6 chr13 56151678 56152004 -64132308 + L1M5 LINE L1 5469 5812 -367 1 1013 693 45 0 0 chr13 56152022 56152111 -64132201 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 1013 1190 69 0 0 chr13 56152526 56152671 -64131641 + B1_Mm SINE Alu 1 145 -2 1 1013 598 216 25 137 chr13 56152689 56152714 -64131598 - B2_Mm2 SINE B2 -14 181 158 1 1013 288 0 0 0 chr13 56152714 56152746 -64131566 + (TC)n Simple_repeat Simple_repeat 1 32 0 1 1013 438 20 0 0 chr13 56152755 56152806 -64131506 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1013 915 165 26 14 chr13 56152806 56152974 -64131338 - B3 SINE B2 -38 157 1 1 1013 207 88 0 0 chr13 56153551 56153585 -64130727 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1 1013 707 248 66 24 chr13 56154465 56154676 -64129636 - MIRb SINE MIR -8 260 41 1 1013 272 211 0 14 chr13 56154677 56154749 -64129563 + C-rich Low_complexity Low_complexity 1 71 0 1 1013 180 0 0 0 chr13 56156338 56156358 -64127954 + (CAGT)n Simple_repeat Simple_repeat 4 23 0 1 1013 354 107 0 0 chr13 56156954 56157010 -64127302 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1013 376 239 10 0 chr13 56157032 56157107 -64127205 - PB1D10 SINE Alu -23 97 18 1 1013 197 276 209 16 chr13 56157250 56157379 -64126933 + MIRc SINE MIR 97 250 -18 1 1013 218 260 83 26 chr13 56158228 56158368 -64125944 + MIRc SINE MIR 9 155 -107 1 1013 659 240 79 11 chr13 56158851 56159028 -64125284 + B4A SINE B4 1 189 -103 1 1013 773 310 131 15 chr13 56159523 56159823 -64124489 + L1MA6 LINE L1 5261 5592 -705 1 1013 345 47 0 0 chr13 56159823 56159866 -64124446 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1013 773 296 119 10 chr13 56159866 56160158 -64124154 + L1MA6 LINE L1 5593 5923 -377 1 1013 1185 68 0 0 chr13 56160797 56160944 -64123368 + B1_Mm SINE Alu 1 147 0 1 1013 284 154 126 7 chr13 56160963 56161049 -64123263 + L1M4 LINE L1 5512 5605 -637 1 1013 789 327 59 51 chr13 56161123 56161445 -64122867 - MLT1D LTR MaLR 0 505 178 1 1013 1711 26 0 0 chr13 56161445 56161637 -64122675 + B2_Mm1a SINE B2 1 192 -1 1 1013 789 327 59 51 chr13 56161637 56161785 -64122527 - MLT1D LTR MaLR -328 177 31 1 1013 376 333 20 71 chr13 56161868 56162123 -64122189 + L1MB8 LINE L1 5647 5888 -290 2 1013 1998 91 78 0 chr13 56162145 56162441 -64121871 - ORR1A2 LTR MaLR -8 319 1 2 1013 656 314 41 1 chr13 56162774 56162970 -64121342 + B4A SINE B4 8 217 -75 2 1013 396 257 243 0 chr13 56162964 56163112 -64121200 + B4A SINE B4 107 290 -2 2 1013 231 191 0 0 chr13 56163162 56163225 -64121087 + GA-rich Low_complexity Low_complexity 2 64 0 2 1013 396 295 70 35 chr13 56163225 56163425 -64120887 + L1MC4 LINE L1 6795 7001 -1041 2 1013 399 372 24 43 chr13 56166497 56166705 -64117607 + MER3 DNA MER1_type 5 208 -1 2 1013 221 294 74 32 chr13 56167979 56168074 -64116238 + MIRb SINE MIR 53 151 -117 2 1013 186 264 19 0 chr13 56169162 56169215 -64115097 + L2b LINE L2 3292 3345 -30 2 1013 181 212 46 46 chr13 56169552 56169639 -64114673 + MIR SINE MIR 86 178 -98 2 1013 351 0 0 0 chr13 56171032 56171071 -64113241 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1013 258 56 0 0 chr13 56171772 56171808 -64112504 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1013 788 217 73 29 chr13 56172256 56172460 -64111852 - B3 SINE B2 -3 213 1 2 1013 252 286 182 21 chr13 56172591 56172734 -64111578 + MIRb SINE MIR 22 187 -81 2 1013 251 282 127 0 chr13 56172948 56173019 -64111293 + B4A SINE B4 7 86 -206 2 1013 228 67 0 0 chr13 56173029 56173059 -64111253 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1013 189 0 0 0 chr13 56173209 56173230 -64111082 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 2 1013 194 312 0 0 chr13 56173918 56173966 -64110346 + MIRb SINE MIR 201 248 -20 2 1013 425 218 73 0 chr13 56174307 56174417 -64109895 - PB1D9 SINE Alu -1 119 2 2 1013 183 156 0 0 chr13 56175505 56175537 -64108775 + T-rich Low_complexity Low_complexity 1 32 0 2 1013 914 216 108 12 chr13 56179686 56179935 -64104377 + RLTR20D LTR ERVK 131 403 -165 2 1013 1730 178 86 3 chr13 56181949 56182288 -64102024 + ORR1B2 LTR MaLR 1 367 0 2 1013 4550 197 180 30 chr13 56182289 56182789 -64101523 + ORR1B2-int LTR MaLR 3 656 -714 2 1013 853 142 28 28 chr13 56182789 56182934 -64101378 + B1_Mus2 SINE Alu 2 146 -1 2 1013 4550 197 180 30 chr13 56182934 56183622 -64100690 + ORR1B2-int LTR MaLR 657 1369 -1 2 1013 1999 161 57 9 chr13 56183623 56183973 -64100339 + ORR1B2 LTR MaLR 1 367 0 2 1013 430 315 139 6 chr13 56184182 56184348 -64099964 - B3A SINE B2 -9 189 2 2 1013 261 383 21 0 chr13 56188860 56188954 -64095358 - MIRb SINE MIR -116 152 57 2 1013 249 180 0 0 chr13 56189928 56189978 -64094334 + GA-rich Low_complexity Low_complexity 3 52 0 2 1013 183 184 0 0 chr13 56190767 56190805 -64093507 + A-rich Low_complexity Low_complexity 1 38 0 2 1013 185 65 0 31 chr13 56192698 56192730 -64091582 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 2 1013 307 259 209 26 chr13 56197947 56198062 -64086250 + B1F1 SINE Alu 14 149 0 2 1013 352 348 53 29 chr13 56198318 56198525 -64085787 + Charlie2a DNA MER1_type 390 601 -2260 2 1013 273 257 73 114 chr13 56198717 56198840 -64085472 + Charlie2a DNA MER1_type 1522 1639 -1222 2 1013 229 304 76 0 chr13 56199025 56199117 -64085195 + Charlie2a DNA MER1_type 1885 1983 -878 2 1013 252 342 142 0 chr13 56199603 56199828 -64084484 + Charlie2a DNA MER1_type 2154 2410 -451 2 1013 373 288 44 36 chr13 56200763 56200900 -64083412 + RSINE1 SINE B4 28 165 0 2 1013 777 132 45 73 chr13 56202204 56202351 -64081961 - URR1A DNA MER1_type 0 226 87 2 1013 4483 116 79 7 chr13 56202351 56203056 -64081256 - RMER6A LTR ERVK 0 756 1 2 1013 777 132 45 73 chr13 56203056 56203087 -64081225 - URR1A DNA MER1_type -140 86 53 2 1013 204 154 26 0 chr13 56204320 56204359 -64079953 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1013 203 103 26 0 chr13 56204360 56204399 -64079913 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 2 1013 867 193 58 0 chr13 56207059 56207230 -64077082 + B3 SINE B2 36 216 0 2 1013 842 303 64 60 chr13 56207329 56207796 -64076516 + L1MA7 LINE L1 5821 6289 -2 2 1013 961 147 196 11 chr13 56207803 56207982 -64076330 + B3 SINE B2 1 212 -4 2 1013 2320 191 73 6 chr13 56208417 56208911 -64075401 - RLTR11A2 LTR ERVK 0 527 1 2 1013 322 211 202 42 chr13 56208958 56209077 -64075235 - B1F1 SINE Alu -5 144 7 2 1013 191 204 0 69 chr13 56209865 56209923 -64074389 - L3 LINE CR1 -2018 2471 2418 2 1013 2499 127 65 23 chr13 56211264 56211739 -64072573 + RLTR11A2 LTR ERVK 33 527 0 2 1013 214 307 40 13 chr13 56215453 56215529 -64068783 + MIR SINE MIR 174 251 -11 2 1013 238 0 53 26 chr13 56217271 56217309 -64067003 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 1013 280 226 0 16 chr13 56217931 56217994 -64066318 + RSINE1 SINE B4 16 77 -88 2 1013 1095 151 77 43 chr13 56218117 56218288 -64066024 + B3 SINE B2 2 181 -35 2 1013 195 42 0 0 chr13 56218288 56218312 -64066000 + (CATA)n Simple_repeat Simple_repeat 1 24 0 2 1013 1095 151 77 43 chr13 56218312 56218348 -64065964 + B3 SINE B2 182 216 0 2 1013 351 312 104 23 chr13 56218558 56218817 -64065495 + B4 SINE B4 8 287 -5 2 1013 238 118 19 38 chr13 56221137 56221190 -64063122 + CT-rich Low_complexity Low_complexity 2 53 0 2 1013 651 215 74 0 chr13 56221198 56221333 -64062979 - B1_Mur2 SINE Alu -1 148 4 2 1013 183 42 0 0 chr13 56221890 56221914 -64062398 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1013 590 239 222 0 chr13 56222050 56222226 -64062086 - B3 SINE B2 -1 215 1 2 1013 640 262 0 122 chr13 56222364 56222577 -64061735 + B3A SINE B2 12 198 0 2 1013 4896 135 49 8 chr13 56222615 56223369 -64060943 + RMER12 LTR ERVK 1 766 -556 2 1013 351 105 0 0 chr13 56223369 56223426 -64060886 + (TCTA)n Simple_repeat Simple_repeat 1 57 0 2 1013 4896 135 49 8 chr13 56223426 56223524 -64060788 + RMER12 LTR ERVK 767 888 -434 2 1013 324 64 0 0 chr13 56223524 56223571 -64060741 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1013 702 261 59 70 chr13 56223580 56223836 -64060476 + RMER12 LTR ERVK 976 1228 -94 2 1013 2127 64 3 0 chr13 56224186 56224469 -64059843 + ORR1A2 LTR MaLR 44 327 0 2 1013 765 220 196 35 chr13 56224812 56225124 -64059188 + MTEb LTR MaLR 17 378 -1 2 1013 289 291 13 0 chr13 56226832 56226911 -64057401 - MIRb SINE MIR -97 171 92 2 1013 925 279 115 18 chr13 56227010 56227349 -64056963 + MTD LTR MaLR 2 373 -46 2 1013 226 157 52 60 chr13 56227370 56227432 -64056880 + MIR SINE MIR 103 172 -96 2 1013 1044 45 0 29 chr13 56228277 56228416 -64055896 + B1_Mus1 SINE Alu 2 136 -12 2 1013 387 0 0 0 chr13 56228419 56228462 -64055850 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1013 2146 86 22 3 chr13 56228534 56228848 -64055464 + ORR1A2 LTR MaLR 1 320 -7 2 1013 228 195 0 0 chr13 56228843 56228884 -64055428 + ID_B1 SINE B4 184 224 0 2 1013 399 73 0 0 chr13 56229386 56229441 -64054871 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1014 237 59 0 0 chr13 56230137 56230171 -64054141 + RMER19C LTR ERVK 578 611 0 2 1014 243 0 0 0 chr13 56230723 56230750 -64053562 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1014 943 61 0 165 chr13 56230755 56230931 -64053381 + B1_Mus1 SINE Alu 2 148 0 2 1014 341 342 92 7 chr13 56231048 56231201 -64053111 - MLT1J2 LTR MaLR -237 211 46 2 1014 261 0 0 0 chr13 56232563 56232592 -64051720 + (CAAT)n Simple_repeat Simple_repeat 1 29 0 2 1014 965 72 7 21 chr13 56232616 56232758 -64051554 + B1_Mus1 SINE Alu 1 140 -8 2 1014 189 0 0 0 chr13 56232773 56232794 -64051518 + (TAA)n Simple_repeat Simple_repeat 2 22 0 2 1014 240 324 28 0 chr13 56233440 56233511 -64050801 - Charlie12 DNA MER1_type -2794 79 7 2 1014 202 219 48 24 chr13 56236750 56236834 -64047478 + (CCCG)n Simple_repeat Simple_repeat 1 86 0 2 1014 24 0 0 0 chr13 56237043 56237067 -64047245 + GC_rich Low_complexity Low_complexity 1 24 0 2 1014 210 71 0 0 chr13 56237787 56237815 -64046497 + (CACCC)n Simple_repeat Simple_repeat 4 31 0 2 1014 336 323 62 81 chr13 56237818 56237964 -64046348 - L2a LINE L2 -97 3329 3190 2 1014 582 240 47 65 chr13 56237964 56238178 -64046134 + B3 SINE B2 1 210 -6 2 1014 336 323 62 81 chr13 56238178 56238304 -64046008 - L2a LINE L2 -237 3189 3062 2 1014 438 362 56 68 chr13 56238373 56238728 -64045584 - ORR1E LTR MaLR -8 351 1 2 1014 412 252 221 19 chr13 56238728 56238859 -64045453 - ORR1E-int LTR MaLR -53 1527 1366 2 1014 1129 180 0 51 chr13 56238863 56239080 -64045232 - URR1A DNA MER1_type -14 212 7 2 1014 467 286 8 8 chr13 56239086 56239213 -64045099 - ORR1E-int LTR MaLR -211 1369 1243 2 1014 811 273 120 78 chr13 56239244 56239513 -64044799 - ORR1E-int LTR MaLR -1135 445 148 2 1014 680 176 265 6 chr13 56239513 56239679 -64044633 + B3 SINE B2 2 210 -6 2 1014 811 273 120 78 chr13 56239679 56239818 -64044494 - ORR1E-int LTR MaLR -1433 147 20 2 1014 219 69 0 0 chr13 56239832 56239861 -64044451 + (TTA)n Simple_repeat Simple_repeat 2 30 0 2 1014 310 301 101 28 chr13 56239920 56240098 -64044214 - MTEb LTR MaLR -112 267 77 2 1014 415 220 22 0 chr13 56240792 56240883 -64043429 - Charlie1a DNA MER1_type -3 1452 1360 2 1014 259 311 0 13 chr13 56240891 56240966 -64043346 + BC1_Mm scRNA scRNA 1 74 -78 2 1014 604 228 32 108 chr13 56241038 56241544 -64042768 + RMER17C LTR ERVK 1 378 -32 2 1014 325 229 83 0 chr13 56241558 56241667 -64042645 - Charlie1a DNA MER1_type -184 1271 1154 2 1014 1049 199 20 15 chr13 56241765 56241969 -64042343 - B3 SINE B2 -2 214 10 2 1014 583 263 78 18 chr13 56241969 56242186 -64042126 - Charlie1a DNA MER1_type -474 981 752 2 1014 562 224 8 39 chr13 56242228 56242299 -64042013 - MTC LTR MaLR -14 407 336 2 1014 2275 81 12 6 chr13 56242299 56242621 -64041691 - ORR1A2 LTR MaLR 0 327 4 2 1014 562 224 8 39 chr13 56242621 56242679 -64041633 - MTC LTR MaLR -86 335 282 2 1014 189 0 0 0 chr13 56242696 56242717 -64041595 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1014 312 274 75 9 chr13 56242774 56242881 -64041431 - MTC LTR MaLR -299 120 7 2 1014 210 179 0 0 chr13 56242926 56242982 -64041330 + C-rich Low_complexity Low_complexity 1 56 0 2 1014 275 346 49 19 chr13 56242982 56243144 -64041168 - Charlie1a DNA MER1_type -758 697 531 2 1014 322 180 272 33 chr13 56243224 56243316 -64040996 + B1F2 SINE Alu 35 148 -1 2 1014 461 320 51 64 chr13 56243412 56243646 -64040666 + ORSL DNA Tip100 29 259 -16 2 1014 455 315 136 40 chr13 56243754 56244055 -64040257 - Charlie1a DNA MER1_type -1065 390 61 2 1014 211 255 0 0 chr13 56244067 56244118 -64040194 + G-rich Low_complexity Low_complexity 1 51 0 2 1014 186 43 0 0 chr13 56244965 56244988 -64039324 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1014 215 125 25 0 chr13 56245149 56245189 -64039123 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1014 4378 183 46 11 chr13 56245339 56246217 -64038095 + Lx5 LINE L1 6132 7039 -11 2 1014 685 241 94 21 chr13 56246377 56246704 -64037608 + RMER15 LTR ERVL 22 458 -117 2 1014 239 331 20 79 chr13 56247399 56247469 -64036843 - B2_Mm1t SINE B2 0 193 3 2 1014 527 231 23 23 chr13 56247469 56247602 -64036710 - RSINE1 SINE B4 -29 136 4 2 1014 26 64 0 0 chr13 56247665 56247712 -64036600 + AT_rich Low_complexity Low_complexity 1 47 0 3 1014 378 0 0 0 chr13 56247739 56247781 -64036531 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1014 207 0 0 0 chr13 56247832 56247855 -64036457 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1014 1259 20 0 0 chr13 56247858 56248005 -64036307 - B1_Mus1 SINE Alu 0 148 2 3 1014 2365 277 47 56 chr13 56248015 56249252 -64035060 - RMER1C Other Other 0 1342 10 3 1014 405 263 0 0 chr13 56249317 56249412 -64034900 - RMER1B Other Other -352 714 620 3 1014 942 255 8 13 chr13 56249435 56249669 -64034643 - B4A SINE B4 -59 233 1 3 1014 657 107 157 0 chr13 56249735 56249856 -64034456 - B1_Mur3 SINE Alu 0 149 10 3 1014 526 322 22 78 chr13 56250155 56250445 -64033867 - L1MC1 LINE L1 -100 6233 5964 3 1014 207 100 0 0 chr13 56250445 56250475 -64033837 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 3 1014 526 322 22 78 chr13 56250475 56250544 -64033768 - L1MC1 LINE L1 -370 5963 5894 3 1014 735 228 72 10 chr13 56250566 56250761 -64033551 - B3 SINE B2 -9 207 1 3 1014 568 265 26 11 chr13 56250780 56250971 -64033341 - L1MC1 LINE L1 -995 5151 4958 3 1014 712 274 53 4 chr13 56251000 56251264 -64033048 - L1MC1 LINE L1 -1279 4867 4591 3 1014 443 267 111 56 chr13 56251272 56251470 -64032842 - L1M5 LINE L1 -2528 3618 3410 3 1014 241 149 191 0 chr13 56251687 56251734 -64032578 - B3A SINE B2 -142 56 1 3 1014 429 330 107 7 chr13 56251848 56252129 -64032183 - L1M5 LINE L1 -3385 2761 2453 3 1014 330 369 88 40 chr13 56252169 56252395 -64031917 - L1M5 LINE L1 -3657 2489 2253 3 1014 275 169 14 0 chr13 56253183 56253254 -64031058 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 1014 205 37 35 69 chr13 56253617 56253675 -64030637 + (TTTTTG)n Simple_repeat Simple_repeat 3 58 0 3 1014 892 227 43 10 chr13 56253688 56253897 -64030415 + B3 SINE B2 1 216 0 3 1014 510 257 7 56 chr13 56254262 56254406 -64029906 - MLT1J1 LTR MaLR -273 171 35 3 1014 588 134 0 32 chr13 56254451 56254574 -64029738 + GA-rich Low_complexity Low_complexity 4 122 0 3 1014 180 135 0 0 chr13 56254897 56254934 -64029378 + (TGG)n Simple_repeat Simple_repeat 1 37 0 3 1014 198 0 0 0 chr13 56254988 56255010 -64029302 + (TC)n Simple_repeat Simple_repeat 1 22 0 3 1014 389 20 20 0 chr13 56255157 56255207 -64029105 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 1014 1925 236 24 45 chr13 56255222 56255315 -64028997 - Lx7 LINE L1 -392 7304 7216 3 1014 234 0 0 0 chr13 56255315 56255341 -64028971 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 3 1014 1925 236 24 45 chr13 56255341 56255754 -64028558 - Lx7 LINE L1 -481 7215 6809 3 1014 1092 30 0 0 chr13 56255782 56255913 -64028399 - B1_Mus1 SINE Alu -16 132 2 3 1014 539 254 174 12 chr13 56257442 56257689 -64026623 + L1M2 LINE L1 4942 5228 -915 3 1014 781 130 61 0 chr13 56257748 56257879 -64026433 - B1_Mur2 SINE Alu 0 149 11 3 1014 356 202 38 105 chr13 56257793 56257898 -64026414 - MT2B LTR ERVL -344 257 160 3 1014 564 299 82 40 chr13 56257898 56258201 -64026111 + L1M2 LINE L1 5276 5591 -706 3 1014 462 230 0 0 chr13 56258528 56258615 -64025697 + B3A SINE B2 3 89 -109 3 1014 380 267 17 33 chr13 56258929 56259049 -64025263 + B3 SINE B2 76 193 -23 3 1014 697 273 25 10 chr13 56259408 56259604 -64024708 - B3 SINE B2 -11 205 7 3 1014 660 295 50 38 chr13 56259747 56260008 -64024304 + B4A SINE B4 7 270 -22 3 1014 1213 62 17 11 chr13 56260111 56260290 -64024022 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1014 573 129 0 0 chr13 56262896 56262989 -64021323 + (TG)n Simple_repeat Simple_repeat 1 93 0 3 1014 252 0 0 0 chr13 56263050 56263078 -64021234 + (CCCTG)n Simple_repeat Simple_repeat 2 29 0 3 1014 734 323 9 0 chr13 56263263 56263489 -64020823 - B4A SINE B4 -63 229 2 3 1014 207 100 0 0 chr13 56263937 56263967 -64020345 + (CCTG)n Simple_repeat Simple_repeat 2 31 0 3 1014 597 103 34 68 chr13 56263970 56264147 -64020165 + (TCTCTG)n Simple_repeat Simple_repeat 2 172 0 3 1014 568 208 144 119 chr13 56264707 56264909 -64019403 + B3 SINE B2 1 207 -9 3 1014 257 282 34 34 chr13 56264974 56265062 -64019250 - MIRb SINE MIR -157 111 24 3 1014 236 221 72 96 chr13 56267028 56267153 -64017159 + MIR SINE MIR 22 143 -65 3 1014 452 221 276 0 chr13 56267372 56267535 -64016777 + B3 SINE B2 3 210 -6 3 1014 3168 92 16 41 chr13 56267579 56268066 -64016246 + MT2C_Mm LTR ERVL 1 475 0 3 1014 855 210 29 19 chr13 56268233 56268442 -64015870 - B3 SINE B2 -4 212 2 3 1014 1194 109 10 30 chr13 56268746 56268945 -64015367 + B2_Mm2 SINE B2 1 195 0 3 1014 783 97 0 0 chr13 56269089 56269203 -64015109 + (GA)n Simple_repeat Simple_repeat 2 115 0 3 1014 359 314 68 41 chr13 56269208 56269354 -64014958 + MER63B DNA AcHobo 268 417 -19 3 1014 369 0 0 0 chr13 56269672 56269713 -64014599 + (GA)n Simple_repeat Simple_repeat 1 41 0 3 1014 297 0 0 0 chr13 56269721 56269754 -64014558 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 3 1014 216 255 0 0 chr13 56270659 56270710 -64013602 - MIR SINE MIR -96 166 116 3 1014 370 321 100 88 chr13 56271087 56271565 -64012747 + LTR33A_ LTR ERVL 45 528 -3 3 1014 225 0 0 0 chr13 56272745 56272770 -64011542 + (CTTG)n Simple_repeat Simple_repeat 1 25 0 3 1014 218 231 101 13 chr13 56274455 56274534 -64009778 + PB1D9 SINE Alu 35 120 0 3 1014 217 289 0 0 chr13 56274535 56274580 -64009732 + polypurine Low_complexity Low_complexity 3 47 0 3 1014 374 0 22 0 chr13 56275103 56275149 -64009163 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 3 1014 194 376 10 10 chr13 56275430 56275532 -64008780 - MIR SINE MIR -98 164 63 3 1014 188 214 0 18 chr13 56276647 56276704 -64007608 + GA-rich Low_complexity Low_complexity 4 59 0 3 1014 1229 98 54 5 chr13 56280632 56280653 -64003659 - B2_Mm1t SINE B2 0 193 164 3 1014 378 0 0 0 chr13 56280653 56280695 -64003617 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 3 1014 1229 98 54 5 chr13 56280695 56280857 -64003455 - B2_Mm1t SINE B2 -30 163 1 3 1014 252 326 45 12 chr13 56280993 56281235 -64003077 + L1MEg LINE L1 1629 1878 -4206 3 1014 213 329 26 0 chr13 56281555 56281631 -64002681 - MIR SINE MIR -101 107 30 3 1014 1883 122 80 58 chr13 56282109 56282508 -64001804 + RMER17C LTR ERVK 1 408 -2 3 1014 324 0 0 0 chr13 56282522 56282558 -64001754 + (TGGA)n Simple_repeat Simple_repeat 3 38 0 3 1014 235 314 58 0 chr13 56283320 56283406 -64000906 + MIRb SINE MIR 46 136 -132 3 1014 326 292 33 21 chr13 56283694 56283846 -64000466 - MIRb SINE MIR -91 185 35 3 1014 1037 217 253 3 chr13 56284056 56284384 -63999928 - MTD LTR MaLR -1 418 9 3 1014 287 356 60 60 chr13 56284793 56285044 -63999268 - ORR1E LTR MaLR -11 348 98 3 1014 226 306 104 8 chr13 56285047 56285172 -63999140 - ORR1E LTR MaLR -215 144 8 3 1014 742 73 9 9 chr13 56286048 56286159 -63998153 + (GGA)n Simple_repeat Simple_repeat 3 113 0 3 1014 509 292 68 64 chr13 56286454 56286688 -63997624 - B4A SINE B4 -48 244 10 3 1014 255 253 35 35 chr13 56286814 56286900 -63997412 - RMER15 LTR ERVL -65 510 425 3 1014 238 296 14 14 chr13 56287217 56287289 -63997023 + MIRc SINE MIR 106 177 -91 3 1014 1251 91 63 0 chr13 56287376 56287551 -63996761 + B2_Mm2 SINE B2 1 186 -9 3 1014 960 223 41 120 chr13 56287564 56287648 -63996664 + B4 SINE B4 2 84 -208 3 1014 288 0 0 0 chr13 56287648 56287680 -63996632 + (CCA)n Simple_repeat Simple_repeat 3 34 0 3 1014 960 223 41 120 chr13 56287680 56287911 -63996401 + B4 SINE B4 85 292 0 3 1014 562 249 3 13 chr13 56287912 56288227 -63996085 + (CATA)n Simple_repeat Simple_repeat 1 311 0 3 1014 1209 291 62 14 chr13 56288624 56288979 -63995333 - MTE2a LTR MaLR 0 379 8 3 1014 1246 248 34 29 chr13 56289044 56289422 -63994890 - L1MB3 LINE L1 -158 6025 5646 3 1014 324 0 0 0 chr13 56289580 56289616 -63994696 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 3 1014 710 67 0 0 chr13 56289616 56289705 -63994607 - B1_Mus2 SINE Alu -10 137 49 3 1014 286 273 10 83 chr13 56289651 56289747 -63994565 - MT2B LTR ERVL -344 257 169 3 1014 2495 61 3 79 chr13 56289828 56289889 -63994423 - ORR1A2 LTR MaLR 0 327 286 3 1014 1195 68 0 0 chr13 56289889 56290035 -63994277 - B1_Mus2 SINE Alu 0 147 2 3 1014 2495 61 3 79 chr13 56290035 56290327 -63993985 - ORR1A2 LTR MaLR -42 285 1 3 1014 385 298 65 68 chr13 56290377 56290772 -63993540 - L1MB3 LINE L1 -560 5611 5192 3 1014 1003 172 82 20 chr13 56291126 56291341 -63992971 - B3 SINE B2 -6 210 4 3 1014 493 271 31 67 chr13 56293575 56293769 -63990543 - RLTR23 LTR ERV1 0 430 244 3 1014 192 312 11 101 chr13 56294162 56294251 -63990061 - L2a LINE L2 0 3426 3346 3 1014 249 289 176 39 chr13 56294393 56294677 -63989635 - MLT1D LTR MaLR -181 324 2 3 1014 1533 221 105 33 chr13 56294707 56294830 -63989482 - MTD LTR MaLR 0 419 299 3 1014 7211 20 6 22 chr13 56294830 56295665 -63988647 + RLTR13B2 LTR ERVK 1 822 0 3 1014 1533 221 105 33 chr13 56295665 56295930 -63988382 - MTD LTR MaLR -121 298 4 3 1014 394 248 76 51 chr13 56296835 56296846 -63987466 + Lx8 LINE L1 6360 6370 -1103 3 1014 2344 74 3 155 chr13 56296846 56297232 -63987080 - ORR1A2 LTR MaLR 0 327 1 3 1014 1262 251 234 43 chr13 56297232 56297424 -63986888 + Lx8 LINE L1 6371 6601 -872 3 1014 3012 63 200 9 chr13 56297424 56297854 -63986458 - RLTR1B LTR ERV1 0 512 1 3 1014 1262 259 18 18 chr13 56297854 56298140 -63986172 + Lx8 LINE L1 6602 6887 -586 3 1014 273 276 60 35 chr13 56298598 56298758 -63985554 - MIRb SINE MIR -96 172 4 3 1014 480 231 58 136 chr13 56299367 56299522 -63984790 + B1F2 SINE Alu 2 144 -5 3 1014 201 229 0 0 chr13 56299524 56299572 -63984740 + GA-rich Low_complexity Low_complexity 6 53 0 3 1014 597 190 6 11 chr13 56299595 56299776 -63984536 + GA-rich Low_complexity Low_complexity 1 180 0 3 1014 708 264 0 0 chr13 56300479 56300619 -63983693 + B1F SINE Alu 1 140 -9 3 1014 531 45 0 0 chr13 56300625 56300691 -63983621 + (CAAG)n Simple_repeat Simple_repeat 2 67 0 3 1014 539 280 0 83 chr13 56301564 56301620 -63982692 + ID_B1 SINE B4 80 126 -98 3 1014 1312 101 11 5 chr13 56301620 56301810 -63982502 + B2_Mm2 SINE B2 1 191 -4 3 1014 539 280 0 83 chr13 56301810 56301909 -63982403 + ID_B1 SINE B4 127 222 -2 3 1014 260 290 79 122 chr13 56303268 56303547 -63980765 + Charlie1a DNA MER1_type 1035 1301 -154 3 1014 925 240 76 10 chr13 56304377 56304575 -63979737 - B3 SINE B2 0 216 6 3 1014 1012 239 19 0 chr13 56304593 56304798 -63979514 - B3 SINE B2 -7 209 1 3 1014 712 111 18 182 chr13 56304966 56305131 -63979181 - B1_Mur4 SINE Alu -2 148 11 3 1014 234 158 0 0 chr13 56305154 56305192 -63979120 + L1M1 LINE L1 5805 5842 -458 4 1014 761 94 44 0 chr13 56305255 56305415 -63978897 + (TCTA)n Simple_repeat Simple_repeat 3 169 0 4 1014 515 160 45 0 chr13 56305449 56305605 -63978707 + (TCTA)n Simple_repeat Simple_repeat 1 163 0 4 1014 322 330 74 66 chr13 56305931 56306187 -63978125 - MLT1I LTR MaLR -81 330 73 4 1014 574 187 99 50 chr13 56306445 56306586 -63977726 + B1_Mur2 SINE Alu 2 149 0 4 1014 903 136 0 0 chr13 56306595 56306742 -63977570 + (GGGAA)n Simple_repeat Simple_repeat 1 147 0 4 1014 206 164 188 29 chr13 56307586 56307655 -63976657 - MIRb SINE MIR -127 141 62 4 1014 1252 95 0 22 chr13 56308134 56308293 -63976019 + B2_Mm2 SINE B2 1 158 -37 4 1014 180 0 0 0 chr13 56308293 56308313 -63975999 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 4 1014 1252 95 0 22 chr13 56308313 56308336 -63975976 + B2_Mm2 SINE B2 159 179 -16 4 1014 213 94 0 0 chr13 56308356 56308388 -63975924 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 4 1014 848 221 80 10 chr13 56308391 56308592 -63975720 + B3 SINE B2 2 216 0 4 1014 1004 238 62 17 chr13 56308609 56308662 -63975650 + L1MB3 LINE L1 5594 5647 -536 4 1014 315 0 0 0 chr13 56308662 56308697 -63975615 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1014 1004 238 62 17 chr13 56308697 56308934 -63975378 + L1MB3 LINE L1 5648 5897 -286 4 1014 409 220 144 0 chr13 56308960 56309078 -63975234 + B3 SINE B2 82 216 0 4 1014 207 0 0 0 chr13 56309887 56309910 -63974402 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 4 1014 222 37 0 0 chr13 56310115 56310142 -63974170 + (CCCCCG)n Simple_repeat Simple_repeat 3 29 0 4 1014 953 83 0 62 chr13 56311132 56311324 -63972988 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1014 510 315 16 0 chr13 56311519 56311646 -63972666 + ID_B1 SINE B4 81 209 -15 4 1014 238 342 84 54 chr13 56311527 56311694 -63972618 + 7SLRNA srpRNA srpRNA 7 178 -136 4 1014 203 373 36 12 chr13 56312313 56312397 -63971915 + MIRb SINE MIR 36 121 -147 4 1014 213 234 218 13 chr13 56313326 56313404 -63970908 - MIR SINE MIR -124 144 51 4 1014 418 202 150 8 chr13 56314095 56314233 -63970079 + B2_Mm2 SINE B2 52 213 -3 4 1014 745 194 0 69 chr13 56314672 56314816 -63969496 - B1_Mur1 SINE Alu -2 147 14 4 1014 957 231 38 19 chr13 56314858 56315070 -63969242 + B3 SINE B2 1 216 0 4 1014 1131 224 9 0 chr13 56315096 56315310 -63969002 + B3 SINE B2 1 216 0 4 1014 838 185 20 7 chr13 56318697 56318849 -63965463 + MTD LTR MaLR 2 155 -264 4 1014 326 156 0 0 chr13 56318871 56318935 -63965377 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 1014 725 149 6 0 chr13 56318936 56319111 -63965201 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 4 1014 566 160 206 14 chr13 56319111 56319257 -63965055 + MTD LTR MaLR 226 399 -20 4 1014 327 25 0 0 chr13 56319859 56319899 -63964413 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1014 561 239 18 0 chr13 56319917 56320030 -63964282 + B1F SINE Alu 23 137 -12 4 1014 660 26 0 0 chr13 56320175 56320253 -63964059 + (TC)n Simple_repeat Simple_repeat 1 78 0 4 1014 1262 79 50 22 chr13 56320399 56320581 -63963731 - B2_Mm2 SINE B2 -8 187 1 4 1014 391 198 31 62 chr13 56321277 56321374 -63962938 - B3 SINE B2 -122 94 1 4 1014 814 127 27 40 chr13 56321462 56321610 -63962702 - B1_Mur4 SINE Alu -3 147 2 4 1014 231 36 0 0 chr13 56321965 56321993 -63962319 + (G)n Simple_repeat Simple_repeat 1 28 0 4 1014 347 275 99 64 chr13 56322161 56322394 -63961918 - ORSL-2a DNA Tip100 -60 282 42 4 1014 219 276 17 0 chr13 56322729 56322787 -63961525 + G-rich Low_complexity Low_complexity 4 62 0 4 1014 214 179 18 18 chr13 56324211 56324268 -63960044 + GA-rich Low_complexity Low_complexity 2 58 0 4 1014 203 214 24 0 chr13 56324890 56324932 -63959380 - MIR SINE MIR -192 70 28 4 1014 1220 56 0 0 chr13 56326159 56326303 -63958009 + B1_Mus1 SINE Alu 5 148 0 4 1014 272 99 23 58 chr13 56326304 56326390 -63957922 + (CAAA)n Simple_repeat Simple_repeat 2 84 0 4 1014 224 289 60 0 chr13 56326443 56326526 -63957786 + PB1D9 SINE Alu 1 88 -32 4 1014 368 225 0 24 chr13 56326574 56326656 -63957656 + ID_B1 SINE B4 128 207 -17 4 1014 902 235 45 15 chr13 56327172 56327371 -63956941 - B3 SINE B2 -6 210 6 4 1014 586 284 25 10 chr13 56328777 56328973 -63955339 + RMER30 DNA MER1_type 2 200 -2 4 1014 234 0 0 0 chr13 56329007 56329033 -63955279 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 1014 582 207 0 0 chr13 56329166 56329382 -63954930 + (CA)n Simple_repeat Simple_repeat 1 216 0 4 1014 205 349 23 0 chr13 56331145 56331231 -63953081 + MIR SINE MIR 53 140 -68 4 1014 496 306 34 95 chr13 56331407 56331741 -63952571 - ORR1E LTR MaLR -4 375 53 4 1014 1021 149 0 0 chr13 56331822 56331970 -63952342 + B1_Mur2 SINE Alu 1 148 -1 4 1014 300 200 0 0 chr13 56332046 56332116 -63952196 + (TCTCTG)n Simple_repeat Simple_repeat 6 75 0 4 1014 684 154 0 0 chr13 56332119 56332294 -63952018 + CT-rich Low_complexity Low_complexity 2 176 0 4 1014 813 136 0 0 chr13 56332327 56332504 -63951808 + (TC)n Simple_repeat Simple_repeat 2 178 0 4 1014 342 127 0 0 chr13 56332493 56332564 -63951748 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 4 1014 327 305 83 25 chr13 56332565 56332686 -63951626 - MLT1C LTR MaLR -71 396 269 4 1014 273 336 0 18 chr13 56332981 56333093 -63951219 + CT-rich Low_complexity Low_complexity 2 111 0 4 1014 330 260 40 10 chr13 56333093 56333194 -63951118 - PB1D10 SINE Alu -13 104 1 4 1014 748 259 65 0 chr13 56333351 56333552 -63950760 - B3 SINE B2 0 216 3 4 1014 247 277 76 102 chr13 56333577 56333734 -63950578 - L1M5 LINE L1 -545 5695 5543 4 1014 1016 263 84 34 chr13 56334532 56334890 -63949422 - RCHARR1 DNA MER1_type 0 974 599 4 1014 680 240 55 11 chr13 56334906 56335087 -63949225 - RCHARR1 DNA MER1_type -425 549 361 4 1014 221 0 35 0 chr13 56335092 56335121 -63949191 + (TTA)n Simple_repeat Simple_repeat 2 31 0 4 1014 753 231 8 0 chr13 56335131 56335265 -63949047 - ID_B1 SINE B4 -9 215 81 4 1014 680 291 116 4 chr13 56335266 56335508 -63948804 - RCHARR1 DNA MER1_type -603 371 103 4 1014 291 216 96 19 chr13 56335981 56336085 -63948227 + L1M5 LINE L1 5324 5435 -738 4 1014 731 232 73 0 chr13 56336087 56336238 -63948074 + B3A SINE B2 1 162 -36 4 1014 519 133 0 0 chr13 56336316 56336421 -63947891 + (CA)n Simple_repeat Simple_repeat 2 106 0 4 1014 368 309 134 79 chr13 56336429 56336721 -63947591 + L1M5 LINE L1 5473 5780 -399 4 1014 1089 90 0 0 chr13 56338576 56338731 -63945581 + (TA)n Simple_repeat Simple_repeat 1 155 0 4 1014 236 282 0 66 chr13 56338754 56338830 -63945482 + ID SINE ID 12 82 -142 4 1014 287 224 0 38 chr13 56338783 56338862 -63945450 + BC1_Mm scRNA scRNA 35 110 -42 4 1014 798 189 7 26 chr13 56338873 56339025 -63945287 + B1_Mur3 SINE Alu 1 149 0 4 1014 708 168 0 0 chr13 56339075 56339188 -63945124 + B3 SINE B2 1 113 -103 4 1014 507 33 0 0 chr13 56339592 56339653 -63944659 + (TAAAA)n Simple_repeat Simple_repeat 2 62 0 4 1014 215 31 31 0 chr13 56340520 56340552 -63943760 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 4 1014 315 0 0 0 chr13 56340800 56340835 -63943477 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1014 1092 299 86 19 chr13 56340902 56341332 -63942980 - LTR40b LTR ERVL 0 462 4 4 1014 184 266 73 114 chr13 56341439 56341562 -63942750 + MIRc SINE MIR 32 149 -119 4 1014 533 310 79 5 chr13 56341841 56342055 -63942257 + MIRc SINE MIR 20 249 -19 4 1014 299 296 29 57 chr13 56342332 56342472 -63941840 - MIR SINE MIR -3 259 124 4 1014 2236 163 196 14 chr13 56342473 56342988 -63941324 - RMER19C LTR ERVK 0 611 3 4 1014 536 244 176 0 chr13 56343088 56343207 -63941105 + B1_Mur1 SINE Alu 4 143 -6 4 1014 1383 54 0 0 chr13 56343255 56343515 -63940797 + (TAGA)n Simple_repeat Simple_repeat 1 260 0 4 1014 289 237 66 0 chr13 56343942 56344018 -63940294 - MER5C DNA MER1_type -154 159 79 4 1014 228 214 0 51 chr13 56344391 56344450 -63939862 - L1M5 LINE L1 -295 5884 5829 4 1014 1037 203 56 5 chr13 56344551 56344749 -63939563 + B3 SINE B2 1 208 -8 4 1014 531 0 0 0 chr13 56344813 56344872 -63939440 + (TCC)n Simple_repeat Simple_repeat 2 60 0 4 1014 189 0 0 0 chr13 56345499 56345520 -63938792 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 4 1014 480 252 68 0 chr13 56345850 56345953 -63938359 + RSINE1 SINE B4 27 136 -29 4 1014 1270 119 5 5 chr13 56346018 56346203 -63938109 + B2_Mm2 SINE B2 1 185 -10 4 1014 1199 253 58 109 chr13 56346255 56346650 -63937662 - MTE2b LTR MaLR -2 377 3 4 1014 200 276 51 38 chr13 56346898 56346977 -63937335 + L4 LINE RTE 534 613 -1416 4 1014 234 0 0 0 chr13 56347053 56347079 -63937233 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1014 341 275 26 60 chr13 56347079 56347195 -63937117 - PB1D10 SINE Alu 0 117 6 4 1014 307 244 227 68 chr13 56347195 56347211 -63937101 - ID_B1 SINE B4 0 224 72 4 1014 181 278 18 18 chr13 56348477 56348532 -63935780 + MIR SINE MIR 41 95 -113 4 1014 948 176 0 0 chr13 56348598 56348746 -63935566 - B1_Mur3 SINE Alu -1 148 1 4 1014 213 333 25 13 chr13 56349201 56349280 -63935032 + L2a LINE L2 2609 2688 -731 4 1014 189 313 65 42 chr13 56349516 56349667 -63934645 + L2a LINE L2 3195 3355 -20 4 1014 207 0 0 0 chr13 56351079 56351102 -63933210 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1014 22 0 0 0 chr13 56352324 56352346 -63931966 + GC_rich Low_complexity Low_complexity 1 22 0 4 1014 243 0 0 0 chr13 56356018 56356045 -63928267 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1014 180 179 0 0 chr13 56357384 56357423 -63926889 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1014 228 67 0 0 chr13 56360570 56360600 -63923712 + (CCCCG)n Simple_repeat Simple_repeat 5 34 0 4 1014 21 0 0 0 chr13 56360651 56360672 -63923640 + GC_rich Low_complexity Low_complexity 1 21 0 4 1015 189 0 0 0 chr13 56361172 56361193 -63923119 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1015 216 0 0 0 chr13 56362298 56362322 -63921990 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1015 271 327 61 30 chr13 56362784 56362948 -63921364 + RMER15 LTR ERVL 400 568 -7 5 1015 321 26 0 0 chr13 56364194 56364232 -63920080 + (CCA)n Simple_repeat Simple_repeat 1 38 0 5 1015 2762 110 32 5 chr13 56364366 56364768 -63919544 + MTC LTR MaLR 1 413 -8 5 1015 543 267 122 18 chr13 56364773 56364937 -63919375 - B3A SINE B2 -16 182 2 5 1015 185 388 89 16 chr13 56364945 56365068 -63919244 - MIR SINE MIR -118 144 13 5 1015 2021 136 89 3 chr13 56365314 56365662 -63918650 - ORR1C1 LTR MaLR 0 378 1 5 1015 450 139 0 48 chr13 56366077 56366160 -63918152 - B2_Mm2 SINE B2 -27 168 90 5 1015 1684 206 33 87 chr13 56366379 56366690 -63917622 - MTD LTR MaLR 0 419 125 5 1015 694 181 111 15 chr13 56366690 56366825 -63917487 - B1_Mus1 SINE Alu 0 148 1 5 1015 1684 206 33 87 chr13 56366825 56366938 -63917374 - MTD LTR MaLR -295 124 18 5 1015 207 0 0 0 chr13 56368232 56368255 -63916057 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1015 683 81 0 10 chr13 56368792 56368892 -63915420 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 5 1015 709 153 208 0 chr13 56368909 56369053 -63915259 - B3 SINE B2 -42 174 1 5 1015 1208 116 31 31 chr13 56369522 56369567 -63914745 - B2_Mm2 SINE B2 0 195 150 5 1015 2824 70 43 25 chr13 56369567 56369960 -63914352 + MTB LTR MaLR 1 400 0 5 1015 1208 116 31 31 chr13 56369960 56370109 -63914203 - B2_Mm2 SINE B2 -46 149 1 5 1015 392 296 48 0 chr13 56370159 56370284 -63914028 - MER63B DNA AcHobo -6 430 300 5 1015 201 175 0 0 chr13 56371237 56371277 -63913035 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1015 31 26 0 0 chr13 56371336 56371374 -63912938 + AT_rich Low_complexity Low_complexity 1 38 0 5 1015 185 0 40 0 chr13 56371559 56371584 -63912728 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1015 242 256 127 71 chr13 56372171 56372215 -63912097 - MLT1A1 LTR MaLR -4 404 362 5 1015 874 89 6 40 chr13 56372215 56372391 -63911921 + (CA)n Simple_repeat Simple_repeat 2 171 0 5 1015 242 256 127 71 chr13 56372391 56372409 -63911903 - MLT1A1 LTR MaLR -47 361 348 5 1015 534 50 0 57 chr13 56372409 56372514 -63911798 + (CA)n Simple_repeat Simple_repeat 2 100 0 5 1015 242 256 127 71 chr13 56372514 56372576 -63911736 - MLT1A1 LTR MaLR -61 347 274 5 1015 2337 104 0 66 chr13 56373203 56373553 -63910759 - ORR1A2 LTR MaLR 0 327 1 5 1015 1046 203 50 5 chr13 56373757 56373955 -63910357 + B3 SINE B2 1 207 -9 5 1015 291 298 61 50 chr13 56374552 56374651 -63909661 - RMER15 LTR ERVL -105 470 371 5 1015 848 280 92 11 chr13 56374655 56374937 -63909375 - Lx8 LINE L1 -248 7225 6921 5 1015 2251 133 135 60 chr13 56374938 56375535 -63908777 - RLTR26 LTR ERVK 0 642 1 5 1015 921 270 172 18 chr13 56375538 56375934 -63908378 - Lx8 LINE L1 -551 6922 6466 5 1015 180 0 0 0 chr13 56375934 56375954 -63908358 + (TG)n Simple_repeat Simple_repeat 2 21 0 5 1015 1105 217 19 9 chr13 56375979 56376193 -63908119 + B3 SINE B2 1 216 0 5 1015 248 243 0 26 chr13 56377301 56377377 -63906935 - URR1B DNA MER1_type -42 183 110 5 1015 1822 126 79 16 chr13 56377557 56377743 -63906569 - RMER17C LTR ERVK 0 410 224 5 1015 699 81 0 0 chr13 56377743 56377842 -63906470 + (GA)n Simple_repeat Simple_repeat 2 100 0 5 1015 1822 126 79 16 chr13 56377842 56378035 -63906277 - RMER17C LTR ERVK -187 223 7 5 1015 3517 242 57 46 chr13 56378041 56379094 -63905218 - Lx9 LINE L1 -274 7370 6306 5 1015 1608 174 129 34 chr13 56379399 56379711 -63904601 - MTD LTR MaLR -24 395 49 5 1015 1914 161 36 22 chr13 56379711 56380073 -63904239 + ORR1B2 LTR MaLR 1 367 0 5 1015 1608 174 129 34 chr13 56380073 56380117 -63904195 - MTD LTR MaLR -371 48 5 5 1015 319 303 60 112 chr13 56380303 56380437 -63903875 - PB1 SINE Alu 0 127 1 5 1015 206 312 12 83 chr13 56380728 56380812 -63903500 - MIRb SINE MIR -168 100 23 5 1015 192 363 38 29 chr13 56381686 56381791 -63902521 + MIRb SINE MIR 50 155 -113 5 1015 878 214 58 11 chr13 56381791 56381980 -63902332 + B3A SINE B2 1 198 0 5 1015 351 258 0 30 chr13 56382011 56382111 -63902201 - MLT1A1 LTR MaLR 0 408 312 5 1015 2636 124 72 118 chr13 56382202 56382786 -63901526 + RLTR31B_Mm LTR ERVK 1 557 0 5 1015 304 0 0 0 chr13 56383941 56383977 -63900335 - B2_Mm2 SINE B2 -157 38 3 5 1015 690 192 53 56 chr13 56383983 56384159 -63900153 - B3 SINE B2 -22 173 2 5 1015 216 0 0 0 chr13 56384463 56384487 -63899825 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1015 1171 256 38 56 chr13 56385239 56385558 -63898754 + ORR1D2 LTR MaLR 1 313 -57 5 1015 1557 185 152 6 chr13 56385569 56385917 -63898395 + MTD LTR MaLR 6 404 -15 5 1015 531 0 0 0 chr13 56386015 56386074 -63898238 + (TC)n Simple_repeat Simple_repeat 2 60 0 5 1015 216 0 0 0 chr13 56386074 56386097 -63898215 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1015 200 237 0 0 chr13 56386099 56386137 -63898175 + MIRb SINE MIR 205 242 -26 5 1015 1384 158 66 4 chr13 56386408 56386650 -63897662 + RLTR40 LTR ERVK 15 271 -546 5 1015 321 77 0 108 chr13 56386650 56386752 -63897560 + C-rich Low_complexity Low_complexity 1 91 0 5 1015 1562 154 63 55 chr13 56386753 56387169 -63897143 + RLTR40 LTR ERVK 256 748 -69 5 1015 891 308 110 3 chr13 56387168 56387487 -63896825 + Tigger7 DNA MER2_type 55 407 -2084 5 1015 1312 250 81 43 chr13 56387488 56387881 -63896431 - MTD LTR MaLR -1 418 11 5 1015 250 280 13 13 chr13 56387899 56387975 -63896337 - ID2 SINE ID -5 78 3 5 1015 669 213 0 23 chr13 56388081 56388211 -63896101 + B3 SINE B2 83 209 -7 5 1015 227 310 80 0 chr13 56388490 56388603 -63895709 + MER45R DNA Tip100 1 122 -1459 5 1015 502 246 66 39 chr13 56388629 56388811 -63895501 - L1MA5 LINE L1 -13 6287 6101 5 1015 419 246 95 74 chr13 56391435 56391624 -63892688 + B3A SINE B2 4 196 -2 5 1015 220 290 67 74 chr13 56391920 56391946 -63892366 + B1F SINE Alu 1 144 -1 5 1015 334 284 34 25 chr13 56391946 56392065 -63892247 + ID_B1 SINE B4 103 222 -2 5 1015 808 279 5 9 chr13 56393261 56393478 -63890834 + B3 SINE B2 1 216 0 5 1015 256 373 45 14 chr13 56393511 56393731 -63890581 + L3 LINE CR1 4248 4474 -15 5 1015 193 308 37 37 chr13 56394502 56394583 -63889729 + MIRb SINE MIR 112 192 -76 5 1015 417 207 241 0 chr13 56395526 56395642 -63888670 + RSINE1 SINE B4 3 146 -19 5 1015 315 146 0 0 chr13 56395673 56395728 -63888584 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1015 180 288 74 74 chr13 56398772 56398907 -63885405 - MIR SINE MIR -98 164 30 5 1015 360 190 405 0 chr13 56399312 56399428 -63884884 + B3 SINE B2 52 214 -2 5 1015 280 198 122 25 chr13 56399684 56399776 -63884536 + MIR SINE MIR 78 169 -93 5 1015 1204 187 68 114 chr13 56399786 56400179 -63884133 - MT2A LTR ERVL -96 505 1 5 1015 212 216 20 0 chr13 56400222 56400273 -63884039 - L2b LINE L2 -17 3358 3307 5 1015 1191 231 40 51 chr13 56400823 56401197 -63883115 + ORR1D2 LTR MaLR 1 370 0 5 1015 337 177 31 10 chr13 56401539 56401636 -63882676 + CT-rich Low_complexity Low_complexity 2 100 0 5 1015 200 273 32 74 chr13 56401696 56401791 -63882521 - MIRm SINE MIR -93 183 93 5 1015 1414 233 99 3 chr13 56402020 56402373 -63881939 + MTD LTR MaLR 33 419 0 5 1015 868 151 0 21 chr13 56403149 56403291 -63881021 + B1_Mur3 SINE Alu 4 142 -7 5 1015 27 0 0 0 chr13 56403296 56403323 -63880989 + AT_rich Low_complexity Low_complexity 1 27 0 5 1015 206 350 34 34 chr13 56404035 56404183 -63880129 + L2b LINE L2 3212 3359 -16 5 1015 232 354 10 10 chr13 56404867 56404967 -63879345 - MER53 DNA hAT -76 117 18 5 1015 265 326 11 0 chr13 56404884 56404973 -63879339 + MER53 DNA hAT 103 192 -1 5 1015 180 0 0 0 chr13 56406623 56406643 -63877669 + (CCCCCA)n Simple_repeat Simple_repeat 5 24 0 5 1015 257 243 27 13 chr13 56407096 56407171 -63877141 + GA-rich Low_complexity Low_complexity 3 78 0 5 1015 202 156 29 59 chr13 56407297 56407365 -63876947 + A-rich Low_complexity Low_complexity 3 68 0 5 1015 294 138 0 0 chr13 56409049 56409107 -63875205 + (CTG)n Simple_repeat Simple_repeat 2 59 0 5 1015 761 172 4 17 chr13 56409117 56409351 -63874961 + CT-rich Low_complexity Low_complexity 1 230 0 5 1015 229 278 137 38 chr13 56410289 56410420 -63873892 + MIRb SINE MIR 88 231 -37 5 1015 180 256 0 25 chr13 56410746 56410786 -63873526 - MIR SINE MIR -139 69 31 5 1015 1106 221 141 29 chr13 56410985 56411293 -63873019 + MTD LTR MaLR 1 344 -75 5 1015 200 34 0 33 chr13 56411293 56411323 -63872989 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 1015 1106 221 141 29 chr13 56411323 56411391 -63872921 + MTD LTR MaLR 345 419 0 5 1015 268 364 127 13 chr13 56411679 56411902 -63872410 + MIRb SINE MIR 21 261 -1 5 1015 234 0 0 0 chr13 56412055 56412081 -63872231 + (CAGT)n Simple_repeat Simple_repeat 1 26 0 5 1015 504 174 0 43 chr13 56412237 56412375 -63871937 + CT-rich Low_complexity Low_complexity 2 133 0 5 1015 207 0 0 0 chr13 56412970 56412993 -63871319 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1015 237 222 19 0 chr13 56413261 56413315 -63870997 + MIR SINE MIR 68 122 -140 5 1015 197 0 0 67 chr13 56414550 56414580 -63869732 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 5 1015 395 250 0 50 chr13 56414609 56414710 -63869602 - RSINE1 SINE B4 -68 97 2 5 1015 201 407 48 41 chr13 56415278 56415309 -63869003 + MIRb SINE MIR 40 67 -201 5 1015 2060 109 43 57 chr13 56415309 56415660 -63868652 + ORR1A1 LTR MaLR 1 346 0 5 1015 201 407 48 41 chr13 56415660 56415774 -63868538 + MIRb SINE MIR 68 185 -83 5 1015 1026 256 156 33 chr13 56417059 56417418 -63866894 + MTD LTR MaLR 1 403 -16 5 1015 305 278 335 5 chr13 56418539 56418727 -63865585 + L1ME4a LINE L1 5870 6119 -5 5 1015 207 0 0 0 chr13 56419031 56419054 -63865258 + (TTA)n Simple_repeat Simple_repeat 3 25 0 6 1015 4728 116 27 107 chr13 56419871 56420855 -63863457 + RMER17A2 LTR ERVK 1 906 0 6 1015 1968 169 48 12 chr13 56422106 56422561 -63861751 - RMER6A LTR ERVK 0 756 321 6 1015 396 258 11 0 chr13 56422546 56422639 -63861673 - B1_Mus2 SINE Alu -36 111 18 6 1015 598 160 47 0 chr13 56422624 56422730 -63861582 - RMER6A LTR ERVK -579 111 1 6 1015 23 0 0 0 chr13 56422732 56422755 -63861557 + AT_rich Low_complexity Low_complexity 1 23 0 6 1015 347 238 38 38 chr13 56422912 56423017 -63861295 - MIRc SINE MIR -134 134 30 6 1015 459 260 39 34 chr13 56423673 56423852 -63860460 + ORR1E LTR MaLR 8 187 -172 6 1015 342 0 0 0 chr13 56424034 56424072 -63860240 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1015 579 316 78 57 chr13 56424364 56424699 -63859613 - ORR1E LTR MaLR 0 359 18 6 1015 251 232 67 44 chr13 56426282 56426372 -63857940 + RMER15 LTR ERVL 1 92 -483 6 1015 2222 225 52 10 chr13 56426392 56426912 -63857400 + RMER15 LTR ERVL 34 575 0 6 1015 207 0 0 0 chr13 56427039 56427062 -63857250 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1015 739 295 52 48 chr13 56428384 56428673 -63855639 - B4A SINE B4 -1 291 2 6 1015 602 279 57 57 chr13 56429612 56429787 -63854525 + B3A SINE B2 1 179 -19 6 1015 207 0 0 0 chr13 56429787 56429810 -63854502 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1015 602 279 57 57 chr13 56429810 56429828 -63854484 + B3A SINE B2 180 194 -4 6 1015 21 0 0 0 chr13 56430364 56430385 -63853927 + AT_rich Low_complexity Low_complexity 1 21 0 6 1015 395 378 52 30 chr13 56430408 56430913 -63853399 + L1ME4a LINE L1 5425 5940 -184 6 1015 501 17 0 0 chr13 56431914 56431972 -63852340 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1015 453 19 0 0 chr13 56432758 56432812 -63851500 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1015 452 122 12 0 chr13 56433439 56433521 -63850791 + (GGGA)n Simple_repeat Simple_repeat 3 85 0 6 1015 273 119 0 0 chr13 56434155 56434197 -63850115 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 6 1015 28 0 0 0 chr13 56434614 56434642 -63849670 + AT_rich Low_complexity Low_complexity 1 28 0 6 1015 360 254 40 101 chr13 56435604 56435753 -63848559 + ORR1D2 LTR MaLR 1 140 -230 6 1015 952 239 51 18 chr13 56435793 56436066 -63848246 + ORR1D2 LTR MaLR 89 370 0 6 1015 1124 56 0 0 chr13 56436941 56437084 -63847228 - B1_Mus2 SINE Alu 0 147 5 6 1015 181 339 57 31 chr13 56437450 56437642 -63846670 - L2 LINE L2 -491 2928 2732 6 1015 422 184 26 84 chr13 56437761 56437951 -63846361 + (TG)n Simple_repeat Simple_repeat 1 179 0 6 1015 1147 35 28 0 chr13 56437984 56438128 -63846184 + B1_Mus1 SINE Alu 1 148 0 6 1015 294 95 0 0 chr13 56438130 56438172 -63846140 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1015 469 341 97 34 chr13 56438932 56439284 -63845028 + MLT1A LTR MaLR 1 374 0 6 1015 284 333 185 6 chr13 56440214 56440392 -63843920 - MER63A DNA AcHobo 0 210 1 6 1015 982 212 0 23 chr13 56440705 56440922 -63843390 - B3 SINE B2 -4 212 1 6 1015 261 271 71 83 chr13 56441280 56441449 -63842863 - RLTR20C LTR ERVK -328 250 84 6 1015 664 216 129 21 chr13 56442307 56442501 -63841811 + B3 SINE B2 2 216 0 6 1015 435 290 176 18 chr13 56442661 56442882 -63841430 + B4 SINE B4 2 257 -35 6 1015 268 304 38 12 chr13 56443130 56443210 -63841102 + Kanga1c DNA Tc2 333 414 -315 6 1015 562 157 38 29 chr13 56443784 56443889 -63840423 - U6 snRNA snRNA -1 106 1 6 1015 186 43 0 0 chr13 56444445 56444468 -63839844 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 6 1015 1199 124 5 21 chr13 56444798 56444988 -63839324 + B2_Mm2 SINE B2 2 188 -7 6 1015 545 42 14 0 chr13 56447058 56447130 -63837182 + (GGA)n Simple_repeat Simple_repeat 1 73 0 6 1015 256 285 161 0 chr13 56447640 56447770 -63836542 - MIR SINE MIR -3 259 109 6 1015 618 39 0 0 chr13 56448922 56448999 -63835313 + (TG)n Simple_repeat Simple_repeat 2 78 0 6 1015 192 227 0 43 chr13 56449955 56450001 -63834311 + L4 LINE RTE 247 290 -1739 6 1015 330 212 417 0 chr13 56450076 56450220 -63834092 + L1MA7 LINE L1 5862 6065 -247 6 1015 238 235 47 18 chr13 56450239 56450408 -63833904 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 6 1015 328 237 143 7 chr13 56450492 56450632 -63833680 + L1MA7 LINE L1 6152 6310 -2 6 1015 382 272 113 26 chr13 56450688 56450839 -63833473 + RSINE1 SINE B4 2 165 0 6 1015 246 278 3 15 chr13 56450839 56450904 -63833408 + B1F1 SINE Alu 11 76 -41 6 1015 233 236 28 0 chr13 56451645 56451717 -63832595 - L1MD3 LINE L1 -136 7859 7786 6 1015 296 336 61 8 chr13 56452718 56452850 -63831462 + MIR3 SINE MIR 63 201 -7 6 1015 641 329 123 70 chr13 56455494 56456119 -63828193 + LTR41 LTR ERVL 1 658 -110 6 1015 1260 14 0 0 chr13 56456859 56457005 -63827307 + (TCTCCC)n Simple_repeat Simple_repeat 3 148 0 6 1015 323 294 106 0 chr13 56457688 56457848 -63826464 + ERVL-E-int LTR ERVL 4823 4999 -668 6 1015 310 222 0 0 chr13 56457898 56457961 -63826351 + ERVL-E-int LTR ERVL 5089 5151 -516 6 1015 370 262 27 97 chr13 56458689 56458739 -63825573 - RLTR42-int LTR ERVK -4122 1400 1359 6 1015 1300 104 22 0 chr13 56458739 56458922 -63825390 - B2_Mm2 SINE B2 -7 188 2 6 1015 370 262 27 97 chr13 56458922 56459057 -63825255 - RLTR42-int LTR ERVK -4164 1358 1228 6 1015 227 354 77 53 chr13 56460053 56460097 -63824215 + MLT2C1 LTR ERVL 96 140 -257 6 1015 441 0 0 0 chr13 56460097 56460146 -63824166 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1015 227 354 77 53 chr13 56460146 56460271 -63824041 + MLT2C1 LTR ERVL 141 269 -128 6 1015 252 250 0 45 chr13 56460318 56460385 -63823927 + L2b LINE L2 3304 3367 -8 6 1015 232 330 21 21 chr13 56460396 56460492 -63823820 + L3 LINE CR1 4387 4482 -7 6 1015 204 330 73 0 chr13 56460697 56460806 -63823506 - MIR SINE MIR -48 214 98 6 1015 837 286 99 49 chr13 56461868 56461997 -63822315 + MLT1C LTR MaLR 1 128 -339 6 1015 1277 103 27 0 chr13 56461997 56462182 -63822130 + B2_Mm2 SINE B2 1 190 -5 6 1015 837 286 99 49 chr13 56462182 56462478 -63821834 + MLT1C LTR MaLR 129 447 -20 6 1015 443 155 33 39 chr13 56462737 56462918 -63821394 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1015 239 280 112 0 chr13 56463160 56463285 -63821027 - L1MD1 LINE L1 -66 6176 6038 6 1015 270 56 0 0 chr13 56463434 56463470 -63820842 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 1015 2327 153 30 37 chr13 56463474 56463909 -63820403 - RMER6B LTR ERVK -24 437 6 6 1015 229 342 60 26 chr13 56463913 56464030 -63820282 + MIR SINE MIR 34 154 -108 6 1015 717 168 0 8 chr13 56464050 56464176 -63820136 + ORR1B1 LTR MaLR 1 125 -269 6 1015 617 230 135 59 chr13 56464170 56464402 -63819910 + ORR1B1 LTR MaLR 62 265 -109 6 1015 218 244 0 0 chr13 56465082 56465123 -63819189 + C-rich Low_complexity Low_complexity 1 41 0 6 1015 435 271 144 31 chr13 56465620 56465814 -63818498 - MER20 DNA MER1_type 0 219 4 6 1015 310 285 69 8 chr13 56465911 56466042 -63818270 + L1MA4 LINE L1 5533 5671 -518 6 1015 598 264 13 37 chr13 56466185 56466433 -63817879 + L1MA4 LINE L1 5694 5933 -241 6 1015 2542 123 57 17 chr13 56466517 56466922 -63817390 - MTC LTR MaLR 0 421 1 6 1015 2207 105 54 86 chr13 56467018 56467423 -63816889 + ORR1B1 LTR MaLR 1 392 -2 6 1015 1118 211 111 163 chr13 56468748 56469190 -63815122 + MTD LTR MaLR 1 419 0 6 1015 642 200 120 12 chr13 56469190 56469357 -63814955 + MTD-int LTR MaLR 1 185 -1073 6 1015 375 340 106 30 chr13 56470839 56471103 -63813209 - LTR16C LTR ERVL -33 456 173 6 1015 469 281 216 0 chr13 56474188 56474341 -63809971 + B3 SINE B2 1 186 -30 6 1015 4653 142 104 13 chr13 56474348 56475171 -63809141 + RMER19B LTR ERVK 5 902 0 6 1015 769 324 114 28 chr13 56475298 56476588 -63807724 - L1ME2 LINE L1 -195 6142 4739 6 1015 224 326 24 53 chr13 56476792 56476887 -63807425 - ID2 SINE ID -59 93 2 6 1015 291 308 33 0 chr13 56477146 56477266 -63807046 - L1ME2 LINE L1 -5627 773 650 6 1015 405 291 119 23 chr13 56478048 56478287 -63806025 + RMER20A LTR ERVK 97 360 -267 6 1015 489 207 120 8 chr13 56479413 56479530 -63804782 - RSINE1 SINE B4 -33 132 3 6 1015 349 312 57 0 chr13 56479535 56479711 -63804601 - L1MA4A LINE L1 -397 5906 5721 6 1015 236 321 24 0 chr13 56479778 56479862 -63804450 - L1MA4A LINE L1 -605 5686 5601 6 1015 289 222 108 27 chr13 56480225 56480336 -63803976 - L1MB2 LINE L1 -3 6168 6049 6 1015 184 24 202 0 chr13 56480434 56480518 -63803794 + (TCCA)n Simple_repeat Simple_repeat 3 103 0 6 1015 306 278 12 33 chr13 56482341 56482456 -63801856 - MIRm SINE MIR -130 138 23 6 1015 746 284 140 47 chr13 56483210 56483617 -63800695 + RCHARR1 DNA MER1_type 3 447 -527 6 1015 213 195 0 0 chr13 56483643 56483684 -63800628 + G-rich Low_complexity Low_complexity 2 42 0 6 1015 808 168 7 0 chr13 56483684 56483821 -63800491 - B1_Mur1 SINE Alu -7 142 5 6 1015 978 258 98 126 chr13 56484248 56484797 -63799515 + RCHARR1 DNA MER1_type 441 974 0 6 1015 975 51 12 148 chr13 56485266 56485428 -63798884 + B1_Mus2 SINE Alu 2 141 -6 6 1015 221 83 0 27 chr13 56485460 56485497 -63798815 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 6 1015 307 361 41 29 chr13 56485497 56485531 -63798781 - B4A SINE B4 -47 245 134 6 1015 560 239 33 66 chr13 56485531 56485652 -63798660 - B1F SINE Alu -32 117 1 6 1015 307 361 41 29 chr13 56485652 56485668 -63798644 - B4A SINE B4 -47 133 73 6 1015 226 287 10 121 chr13 56486155 56486229 -63798083 - ID_B1 SINE B4 -1 223 160 6 1015 3267 43 20 5 chr13 56486229 56486623 -63797689 - MTB LTR MaLR 0 400 1 6 1015 226 287 10 121 chr13 56486623 56486647 -63797665 - ID_B1 SINE B4 -65 159 136 6 1015 618 202 9 17 chr13 56486707 56486823 -63797489 + PB1D7 SINE Alu 3 117 -3 6 1015 414 0 0 0 chr13 56487620 56487666 -63796646 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 6 1015 243 0 0 0 chr13 56489745 56489772 -63794540 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1015 2363 200 62 26 chr13 56490293 56490819 -63793493 + RMER19C LTR ERVK 1 605 -6 6 1015 331 344 24 89 chr13 56491043 56491212 -63793100 + L1M5 LINE L1 4978 5135 -1011 6 1015 1350 109 0 5 chr13 56491216 56491409 -63792903 + B2_Mm2 SINE B2 2 193 -2 6 1015 243 337 41 0 chr13 56491743 56491863 -63792449 + L1M5 LINE L1 5460 5585 -594 6 126 1661 233 43 0 chr13 56491864 56492216 -63792096 + ORR1D2 LTR MaLR 1 367 -3 7 1016 1208 241 108 7 chr13 56492468 56492765 -63791547 + MTD LTR MaLR 45 371 -48 7 1016 1312 166 4 18 chr13 56494830 56495057 -63789255 + URR1B DNA MER1_type 1 224 -1 7 1016 309 252 77 51 chr13 56495586 56495703 -63788609 + MLT1C LTR MaLR 22 141 -326 7 1016 250 350 20 10 chr13 56495772 56495873 -63788439 + MLT1C LTR MaLR 284 385 -120 7 1016 338 319 68 17 chr13 56495948 56495982 -63788330 - ID_B1 SINE B4 -100 124 1 7 1016 410 232 12 24 chr13 56495982 56496066 -63788246 - ID4 SINE ID 0 83 1 7 1016 393 149 0 0 chr13 56496066 56496133 -63788179 + (TCC)n Simple_repeat Simple_repeat 1 67 0 7 1016 255 295 101 11 chr13 56496141 56496230 -63788082 - PB1D10 SINE Alu -20 97 1 7 1016 235 309 107 67 chr13 56498427 56498576 -63785736 + MIRb SINE MIR 40 194 -74 7 1016 396 59 0 0 chr13 56498941 56498992 -63785320 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1016 261 352 0 69 chr13 56500056 56500172 -63784140 + MIR SINE MIR 16 123 -139 1 1016 231 295 30 59 chr13 56500949 56501050 -63783262 - RLTR16 LTR ERVK -376 129 32 2 1016 416 268 124 35 chr13 56501204 56501405 -63782907 + Tigger2b DNA MER2_type 415 633 -93 3 1016 706 274 89 41 chr13 56503206 56503583 -63780729 + BGLII_B LTR ERVK 1 422 -23 4 1016 375 171 29 0 chr13 56503684 56503789 -63780523 + (TCTA)n Simple_repeat Simple_repeat 1 108 0 5 1016 1150 169 19 5 chr13 56507012 56507226 -63777086 + URR1B DNA MER1_type 9 225 0 6 1016 957 227 24 94 chr13 56507238 56507535 -63776777 + MT2B LTR ERVL 325 600 -1 7 1016 352 211 148 39 chr13 56507657 56507785 -63776527 + RLTR14 LTR ERV1 228 369 -13 8 1016 894 162 0 0 chr13 56507904 56508103 -63776209 + (CA)n Simple_repeat Simple_repeat 1 199 0 9 1016 851 88 0 8 chr13 56508555 56508681 -63775631 + B2_Mm2 SINE B2 2 126 -69 1 1016 306 0 0 0 chr13 56508709 56508743 -63775569 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1 1016 7535 156 28 29 chr13 56508773 56510406 -63773906 + Lx5 LINE L1 5411 7045 -5 1 1016 906 327 34 19 chr13 56510474 56510942 -63773370 - Lx9 LINE L1 -174 7470 6987 1 1016 483 120 0 81 chr13 56511169 56511305 -63773007 + C-rich Low_complexity Low_complexity 3 127 0 1 1016 1813 180 77 109 chr13 56511983 56512559 -63771753 + RMER19B LTR ERVK 1 611 0 1 1016 1890 189 83 178 chr13 56514933 56515607 -63768705 - RMER19C LTR ERVK -1 610 1 1 1016 21 0 0 0 chr13 56516954 56516975 -63767337 + AT_rich Low_complexity Low_complexity 1 21 0 1 1016 3976 177 81 27 chr13 56516979 56517864 -63766448 - Lx9 LINE L1 -7 7637 6705 1 1016 717 202 31 12 chr13 56518085 56518245 -63766067 - B3 SINE B2 -52 164 2 1 1016 1566 149 167 14 chr13 56518504 56518857 -63765455 - RMER17C LTR ERVK -3 407 1 2 1016 2287 124 50 5 chr13 56519367 56519763 -63764549 - RLTR31_Mm LTR ERVK 0 561 148 2 1016 200 86 29 0 chr13 56520704 56520739 -63763573 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 2 1016 301 247 12 49 chr13 56521048 56521129 -63763183 + ID_B1 SINE B4 16 93 -131 2 1016 544 254 25 0 chr13 56521155 56521277 -63763035 - RSINE1 SINE B4 -38 127 3 2 1016 518 272 132 72 chr13 56521280 56521613 -63762699 - L1MD1 LINE L1 -138 6104 5752 2 1016 260 283 113 23 chr13 56521653 56521830 -63762482 - L1MD1 LINE L1 -600 5642 5450 2 1016 447 115 53 15 chr13 56521830 56521962 -63762350 + (TG)n Simple_repeat Simple_repeat 1 137 0 2 1016 279 90 77 0 chr13 56521984 56522062 -63762250 + (TG)n Simple_repeat Simple_repeat 2 85 0 2 1016 501 252 22 0 chr13 56522095 56522234 -63762078 - L1MD1 LINE L1 -787 5455 5314 2 1016 337 339 180 37 chr13 56522336 56522848 -63761464 - L1MD1 LINE L1 -920 5226 4641 2 1016 266 299 39 82 chr13 56524786 56524968 -63759344 + L1M4 LINE L1 5133 5306 -840 2 1016 226 317 125 0 chr13 56524989 56525093 -63759219 + L1MEf LINE L1 27 143 -6057 2 1016 302 288 16 25 chr13 56525126 56525247 -63759065 + CT-rich Low_complexity Low_complexity 2 121 0 2 1016 303 289 43 9 chr13 56525369 56525484 -63758828 + L1MEf LINE L1 384 502 -5698 2 1016 571 313 98 29 chr13 56525527 56525833 -63758479 + L1MEf LINE L1 445 771 -5429 2 1016 362 342 86 28 chr13 56525953 56526263 -63758049 + L1MEf LINE L1 852 1195 -5005 2 1016 240 184 0 0 chr13 56526615 56526664 -63757648 + G-rich Low_complexity Low_complexity 3 51 0 3 1016 449 304 92 42 chr13 56528393 56528716 -63755596 - MLT1C LTR MaLR -2 465 43 3 1016 246 128 0 0 chr13 56529293 56529332 -63754980 + (TCCC)n Simple_repeat Simple_repeat 1 39 0 3 1016 993 192 14 42 chr13 56529334 56529546 -63754766 - B3 SINE B2 -10 206 1 3 1016 217 315 147 27 chr13 56531165 56531315 -63752997 - MIRb SINE MIR -70 198 31 3 1016 664 132 0 9 chr13 56532887 56532994 -63751318 - B2_Mm2 SINE B2 -88 107 2 3 1016 1018 45 8 0 chr13 56533295 56533428 -63750884 - B1_Mm SINE Alu 0 147 14 3 1016 396 0 0 0 chr13 56533462 56533506 -63750806 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1016 180 0 0 0 chr13 56534017 56534037 -63750275 + (C)n Simple_repeat Simple_repeat 1 20 0 3 1016 330 26 0 0 chr13 56536334 56536373 -63747939 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 1016 308 318 0 6 chr13 56538452 56538629 -63745683 + (TG)n Simple_repeat Simple_repeat 1 176 0 4 1016 264 244 0 0 chr13 56538666 56538756 -63745556 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 1016 349 252 32 103 chr13 56538798 56538953 -63745359 - B4 SINE B4 -143 149 6 4 1016 2612 68 92 13 chr13 56538956 56539346 -63744966 + BGLII LTR ERVK 1 421 0 4 1016 304 301 119 26 chr13 56540956 56541160 -63743152 - MIRb SINE MIR -9 259 31 4 1016 494 177 14 0 chr13 56541770 56541917 -63742395 + (TCTG)n Simple_repeat Simple_repeat 2 150 0 4 1016 507 298 57 16 chr13 56541998 56542192 -63742120 - L1MB5 LINE L1 -135 6039 5838 4 1016 586 284 38 5 chr13 56542215 56542399 -63741913 - RMER15 LTR ERVL -50 525 336 4 1016 336 274 84 52 chr13 56542439 56542593 -63741719 - RMER15 LTR ERVL -416 159 1 4 1016 543 288 71 78 chr13 56542593 56542902 -63741410 - L1MB5 LINE L1 -355 5819 5513 4 1016 424 260 109 16 chr13 56542903 56543087 -63741225 + B3 SINE B2 2 202 -14 4 1016 258 116 0 0 chr13 56543147 56543190 -63741122 + (TCC)n Simple_repeat Simple_repeat 3 45 0 4 1016 1431 48 27 0 chr13 56543192 56543379 -63740933 - B2_Mm1a SINE B2 0 193 2 4 1016 552 258 148 31 chr13 56543379 56543721 -63740591 - L1MB5 LINE L1 -686 5492 5104 4 1016 261 0 0 0 chr13 56543721 56543750 -63740562 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1016 314 289 163 43 chr13 56543750 56543915 -63740397 - L1MB5 LINE L1 -1043 5103 4921 4 1016 246 62 0 0 chr13 56544419 56544451 -63739861 + (CCCCCT)n Simple_repeat Simple_repeat 5 36 0 5 1016 365 291 100 124 chr13 56545748 56545814 -63738498 - MLT1C LTR MaLR 0 467 402 5 1016 976 191 28 37 chr13 56545814 56546032 -63738280 + B3 SINE B2 1 216 0 5 1016 365 291 100 124 chr13 56546032 56546295 -63738017 - MLT1C LTR MaLR -66 401 146 5 1016 900 276 32 112 chr13 56546630 56546944 -63737368 + B4 SINE B4 4 292 0 5 1016 1489 184 99 15 chr13 56547012 56547355 -63736957 + ORR1D1 LTR MaLR 1 372 -2 5 1016 243 262 36 12 chr13 56547381 56547466 -63736846 + MIRb SINE MIR 122 206 -62 5 1016 534 239 0 0 chr13 56548130 56548264 -63736048 + (CA)n Simple_repeat Simple_repeat 2 135 0 5 1016 249 285 105 35 chr13 56548401 56548518 -63735794 - Lx8 LINE L1 -2 7471 7343 5 1016 1044 188 14 23 chr13 56548518 56548736 -63735576 - B3 SINE B2 0 216 1 5 1016 249 285 105 35 chr13 56548736 56548789 -63735523 - Lx8 LINE L1 -131 7342 7290 5 1016 213 326 149 5 chr13 56549831 56550019 -63734293 - L2 LINE L2 -556 2863 2649 6 1016 324 95 71 0 chr13 56551684 56551768 -63732544 + (TG)n Simple_repeat Simple_repeat 1 90 0 6 1016 309 26 0 0 chr13 56551975 56552013 -63732299 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 6 1016 336 384 64 64 chr13 56553447 56553823 -63730489 - Charlie8 DNA MER1_type -1978 450 75 6 1016 323 255 27 8 chr13 56554065 56554328 -63729984 + (CA)n Simple_repeat Simple_repeat 1 268 0 6 1016 324 158 0 0 chr13 56554329 56554386 -63729926 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 1016 442 225 29 0 chr13 56554385 56554558 -63729754 + (CA)n Simple_repeat Simple_repeat 2 179 0 6 1016 180 267 22 0 chr13 56555221 56555266 -63729046 - MIRm SINE MIR -117 159 114 6 1016 1336 217 69 98 chr13 56555724 56555943 -63728369 - MTD LTR MaLR 0 419 224 6 1016 2311 174 44 5 chr13 56555943 56556348 -63727964 - MTC LTR MaLR 0 421 1 6 1016 1450 212 69 98 chr13 56556348 56556547 -63727765 - MTD LTR MaLR -196 223 13 6 1016 987 163 144 21 chr13 56556904 56557098 -63727214 + URR1A DNA MER1_type 9 226 0 7 1016 21 0 0 0 chr13 56557298 56557319 -63726993 + AT_rich Low_complexity Low_complexity 1 21 0 7 1016 328 362 58 44 chr13 56557446 56557810 -63726502 + Charlie20a DNA Charlie 89 457 -350 7 1016 322 135 39 25 chr13 56558126 56558235 -63726077 - B2_Mm2 SINE B2 -3 192 46 7 1016 1266 86 17 6 chr13 56558299 56558475 -63725837 - B2_Mm1t SINE B2 -14 179 2 7 1016 303 309 115 32 chr13 56558718 56558935 -63725377 + L1MC4 LINE L1 7688 7922 -120 7 1016 592 282 79 43 chr13 56560353 56560772 -63723540 + L1_Mur3 LINE L1 1326 1759 -4121 7 1016 292 239 25 74 chr13 56560762 56560884 -63723428 + L1MA4A LINE L1 4588 4703 -1437 7 1016 928 293 29 137 chr13 56560921 56561397 -63722915 + L1MA4A LINE L1 4678 5098 -1045 7 1016 351 238 177 16 chr13 56561397 56561521 -63722791 - RSINE1 SINE B4 -18 147 4 7 1016 928 293 29 137 chr13 56561521 56561740 -63722572 + L1MA4A LINE L1 5099 5298 -845 7 1016 1141 95 0 0 chr13 56561742 56561889 -63722423 + B1_Mus1 SINE Alu 1 147 -1 7 1016 479 276 99 92 chr13 56561947 56562469 -63721843 + L1MA4A LINE L1 5476 6020 -136 7 1016 2262 130 58 0 chr13 56563844 56564205 -63720107 - RLTR14 LTR ERV1 0 382 1 8 1016 191 320 250 11 chr13 56564350 56564530 -63719782 - MIRb SINE MIR -8 260 38 8 1016 480 111 0 0 chr13 56565652 56565724 -63718588 + (TCC)n Simple_repeat Simple_repeat 3 74 0 8 1016 784 258 101 14 chr13 56566605 56566892 -63717420 - L1M2 LINE L1 -1774 4369 4058 8 1016 318 129 0 0 chr13 56566909 56566971 -63717341 + (TC)n Simple_repeat Simple_repeat 1 62 0 8 1016 324 0 0 0 chr13 56566972 56567008 -63717304 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 1016 691 297 130 78 chr13 56567009 56567102 -63717210 - L1M2 LINE L1 -2631 3918 3820 8 1016 183 42 0 0 chr13 56567102 56567126 -63717186 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 8 1016 801 291 119 75 chr13 56567126 56568215 -63716097 - L1M2 LINE L1 -2730 3819 2686 8 1016 360 0 0 0 chr13 56568464 56568504 -63715808 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1016 1455 147 9 9 chr13 56568623 56568849 -63715463 + URR1A DNA MER1_type 1 226 0 8 1016 948 248 32 43 chr13 56570805 56571151 -63713161 - RLTR15 LTR ERVK -17 342 1 9 1016 227 224 13 0 chr13 56571347 56571423 -63712889 + GA-rich Low_complexity Low_complexity 2 78 0 9 1016 513 193 0 0 chr13 56573784 56573919 -63710393 + C-rich Low_complexity Low_complexity 1 135 0 9 1016 1076 60 0 0 chr13 56573925 56574059 -63710253 - B1_Mus1 SINE Alu -14 134 1 9 1016 1376 86 16 11 chr13 56575876 56576065 -63708247 + B2_Mm2 SINE B2 1 190 -5 9 1016 180 0 0 0 chr13 56576153 56576173 -63708139 + (CACCC)n Simple_repeat Simple_repeat 3 22 0 9 1016 199 273 0 18 chr13 56576316 56576372 -63707940 - L2a LINE L2 -4 3422 3368 9 1016 197 0 0 67 chr13 56577094 56577124 -63707188 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 9 1016 382 324 83 21 chr13 56578572 56578764 -63705548 + MER46C DNA MER2_type 129 332 -6 9 1016 23 33 0 0 chr13 56579976 56580006 -63704306 + AT_rich Low_complexity Low_complexity 1 30 0 9 1016 955 199 33 0 chr13 56580015 56580196 -63704116 - B3A SINE B2 -11 187 1 1 1016 201 384 40 10 chr13 56581096 56581196 -63703116 + MIRb SINE MIR 35 137 -131 1 1016 186 208 0 0 chr13 56582756 56582809 -63701503 + GA-rich Low_complexity Low_complexity 5 57 0 1 1016 444 19 0 0 chr13 56582827 56582880 -63701432 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1016 340 293 60 60 chr13 56584508 56584645 -63699667 - MIR SINE MIR -83 185 47 1 1016 346 365 46 54 chr13 56584727 56585001 -63699311 - B4 SINE B4 -9 283 12 1 1016 240 111 0 0 chr13 56585025 56585061 -63699251 + (CCCTG)n Simple_repeat Simple_repeat 3 38 0 1 1016 234 0 0 0 chr13 56585185 56585211 -63699101 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1016 3486 205 91 42 chr13 56585566 56586426 -63697886 - RMER19B LTR ERVK 0 902 1 1 1016 665 299 119 71 chr13 56586980 56587145 -63697167 - L1MA5 LINE L1 -10 6290 6155 1 1016 1001 180 90 0 chr13 56587145 56587334 -63696978 - B3 SINE B2 -9 207 2 1 1016 665 299 119 71 chr13 56587334 56587938 -63696374 - L1MA5 LINE L1 -146 6154 5484 1 1016 244 292 63 71 chr13 56587958 56587997 -63696315 + L1M2 LINE L1 4144 4177 -1963 1 1016 3320 21 0 10 chr13 56587997 56588381 -63695931 + L1Md_A LINE L1 6202 6581 -1 1 1016 244 292 63 71 chr13 56588381 56588423 -63695889 + L1M2 LINE L1 4178 4215 -1925 1 1016 540 0 0 0 chr13 56588423 56588483 -63695829 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 1016 244 292 63 71 chr13 56588483 56588654 -63695658 + L1M2 LINE L1 4216 4394 -1746 1 1016 280 287 108 27 chr13 56588693 56588804 -63695508 + PB1 SINE Alu 4 123 -4 1 1016 476 272 48 78 chr13 56588804 56589035 -63695277 + L1M2 LINE L1 4422 4645 -1498 1 1016 22 56 0 0 chr13 56589163 56589199 -63695113 + AT_rich Low_complexity Low_complexity 1 36 0 1 1016 1097 303 50 62 chr13 56590815 56590974 -63693338 + MTEa LTR MaLR 1 160 -219 1 1016 1096 195 45 5 chr13 56590974 56591175 -63693137 + B3 SINE B2 1 209 -7 1 1016 1097 303 50 62 chr13 56591175 56591399 -63692913 + MTEa LTR MaLR 161 379 0 1 1016 1451 264 35 18 chr13 56591427 56591770 -63692542 - MTE2b LTR MaLR -18 361 13 1 1016 6808 75 40 26 chr13 56591776 56593496 -63690816 + L1VL2 LINE L1 88 1826 -1789 1 1016 1096 103 0 0 chr13 56593552 56593698 -63690614 + B1_Mus2 SINE Alu 2 147 0 1 1016 333 303 0 0 chr13 56593792 56593881 -63690431 - PB1D10 SINE Alu -2 115 27 1 1016 2773 25 12 0 chr13 56594376 56594703 -63689609 + IAPEY_LTR LTR ERVK 55 385 0 1 1016 200 111 28 0 chr13 56594837 56594873 -63689439 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 1 1016 21 57 0 0 chr13 56595073 56595108 -63689204 + AT_rich Low_complexity Low_complexity 1 35 0 1 1016 204 125 0 0 chr13 56595156 56595188 -63689124 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1016 805 329 81 75 chr13 56595690 56596526 -63687786 - L2a LINE L2 -3 3423 2573 1 1016 467 128 12 0 chr13 56596536 56596622 -63687690 + (GA)n Simple_repeat Simple_repeat 2 88 0 1 1016 222 266 104 61 chr13 56596622 56596786 -63687526 - L2a LINE L2 -831 2588 2418 1 1016 254 309 156 14 chr13 56596800 56596941 -63687371 + RMER12 LTR ERVK 696 856 -466 1 1016 3018 159 11 11 chr13 56597452 56597980 -63686332 - RLTR11A LTR ERVK 0 528 1 1 1016 819 168 34 34 chr13 56598105 56598253 -63686059 - B1_Mus1 SINE Alu 0 148 1 1 1016 441 54 0 0 chr13 56598256 56598312 -63686000 + (TTCC)n Simple_repeat Simple_repeat 4 59 0 1 1016 2120 188 24 32 chr13 56598312 56598770 -63685542 - ORR1D1-int LTR MaLR -1072 508 29 1 1016 1870 168 43 27 chr13 56598771 56599139 -63685173 - ORR1D1 LTR MaLR 0 374 1 1 1016 210 259 35 0 chr13 56599429 56599487 -63684825 + MIR SINE MIR 113 172 -90 1 1016 466 291 44 93 chr13 56599722 56599737 -63684575 - B2_Mm2 SINE B2 -22 173 162 1 1016 369 0 0 0 chr13 56599737 56599778 -63684534 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1016 775 250 39 7 chr13 56599778 56599944 -63684368 - B3A SINE B2 -34 161 1 1 1016 195 42 0 0 chr13 56600172 56600196 -63684116 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1016 238 356 55 24 chr13 56600220 56600384 -63683928 - L1MC3 LINE L1 -478 7307 7139 1 1016 295 194 105 21 chr13 56600468 56600563 -63683749 - L1MC3 LINE L1 -825 6960 6858 1 1016 261 273 0 0 chr13 56600588 56600643 -63683669 + polypyrimidine Low_complexity Low_complexity 4 58 0 1 1016 324 197 138 27 chr13 56600653 56600802 -63683510 - L1MC3 LINE L1 -1099 6896 6697 1 1016 246 132 0 0 chr13 56600839 56600892 -63683420 + (T)n Simple_repeat Simple_repeat 1 53 0 1 1016 351 0 0 0 chr13 56601160 56601199 -63683113 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 1016 464 323 123 31 chr13 56601957 56602245 -63682067 - MLT1F2 LTR MaLR -4 676 290 1 1016 497 152 0 12 chr13 56602248 56602328 -63681984 - RMER17C LTR ERVK -331 79 1 1 1016 513 218 10 0 chr13 56602735 56602836 -63681476 + RSINE1 SINE B4 3 104 -61 1 1016 29 28 0 0 chr13 56602877 56602913 -63681399 + AT_rich Low_complexity Low_complexity 1 36 0 1 1016 704 208 8 0 chr13 56602944 56603074 -63681238 - B1_Mur1 SINE Alu -7 142 12 1 1016 433 322 45 58 chr13 56603074 56603164 -63681148 - ID_B1 SINE B4 -3 217 1 1 1016 21 36 0 0 chr13 56603164 56603192 -63681120 + AT_rich Low_complexity Low_complexity 1 28 0 1 1016 223 359 74 23 chr13 56603225 56603370 -63680942 - MIRb SINE MIR -26 236 83 1 1016 182 196 50 67 chr13 56604041 56604101 -63680211 + L3 LINE CR1 2089 2147 -2342 1 1016 186 293 48 12 chr13 56604288 56604371 -63679941 + L2a LINE L2 2058 2143 -1276 1 1016 293 347 74 46 chr13 56604698 56604873 -63679439 + LTR81B LTR ERV1? 319 498 -895 1 1016 3284 66 190 2 chr13 56604958 56605443 -63678869 - MT2B2 LTR ERVL -8 576 1 1 1016 422 225 31 231 chr13 56605249 56605474 -63678838 - ORR1A3-int LTR MaLR -1206 757 578 1 1016 504 206 11 0 chr13 56606529 56606621 -63677691 + ID_B1 SINE B4 99 191 -33 1 1016 347 215 115 106 chr13 56606621 56606633 -63677679 + PB1 SINE Alu 18 122 -5 1 1016 188 325 175 23 chr13 56606890 56607199 -63677113 + L2a LINE L2 2931 3286 -140 1 1016 698 291 0 7 chr13 56607681 56607702 -63676610 - RSINE1 SINE B4 -4 161 141 1 1016 342 0 0 0 chr13 56607702 56607740 -63676572 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1016 698 257 7 11 chr13 56607740 56607877 -63676435 - RSINE1 SINE B4 -25 140 3 1 1016 21 36 0 0 chr13 56608133 56608161 -63676151 + AT_rich Low_complexity Low_complexity 1 28 0 1 1016 278 224 14 82 chr13 56608962 56609035 -63675277 + RMER15 LTR ERVL 1 68 -507 1 1016 1053 263 44 74 chr13 56609037 56609443 -63674869 + RMER15 LTR ERVL 27 420 -155 1 1016 3634 48 5 2 chr13 56609646 56610081 -63674231 - RLTR10C LTR ERVK 0 436 1 1 1016 1891 151 69 66 chr13 56610182 56610559 -63673753 - ORR1C1 LTR MaLR 0 378 1 1 1016 443 302 231 16 chr13 56612164 56612799 -63671513 - L2a LINE L2 -287 3139 2361 1 1016 1699 281 93 63 chr13 56613085 56613414 -63670898 + L1_Mur3 LINE L1 1485 1815 -4065 1 1016 3954 175 60 1 chr13 56613414 56614133 -63670179 - Lx5 LINE L1 -8 7042 6282 1 1016 1699 273 87 58 chr13 56614133 56614813 -63669499 + L1_Mur3 LINE L1 1816 2532 -3348 1 1016 1044 108 0 40 chr13 56614813 56614986 -63669326 - B2_Mm2 SINE B2 -5 190 25 1 1016 487 231 46 8 chr13 56614989 56615120 -63669192 + L1_Rod LINE L1 2548 2683 -3164 1 1016 441 336 27 45 chr13 56615842 56616063 -63668249 + Lx8 LINE L1 7111 7327 -146 1 1016 318 26 0 0 chr13 56616072 56616111 -63668201 + (GA)n Simple_repeat Simple_repeat 1 39 0 1 1016 1168 51 0 0 chr13 56616176 56616314 -63667998 + B1_Mus1 SINE Alu 2 139 -9 1 1016 213 39 0 0 chr13 56616314 56616340 -63667972 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1016 1055 217 5 0 chr13 56616827 56617039 -63667273 + B3 SINE B2 4 216 0 1 1016 673 268 9 74 chr13 56617311 56617327 -63666985 - B3 SINE B2 -1 215 200 1 1016 264 30 0 0 chr13 56617327 56617360 -63666952 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1 1016 673 268 9 74 chr13 56617360 56617573 -63666739 - B3 SINE B2 -17 199 2 1 1016 1192 34 0 39 chr13 56619021 56619174 -63665138 - B1_Mm SINE Alu 0 147 1 1 1016 211 182 0 0 chr13 56619310 56619343 -63664969 + polypyrimidine Low_complexity Low_complexity 1 33 0 1 1016 698 0 0 73 chr13 56619590 56619700 -63664612 + (TCTCCC)n Simple_repeat Simple_repeat 4 105 0 1 1016 222 91 0 0 chr13 56620321 56620354 -63663958 + (TGGGGG)n Simple_repeat Simple_repeat 4 36 0 1 1016 2127 163 68 18 chr13 56620785 56621184 -63663128 - MTC LTR MaLR -1 420 2 1 1016 2002 80 53 0 chr13 56621325 56621627 -63662685 - ORR1A2 LTR MaLR -9 318 1 1 1016 292 301 53 39 chr13 56621698 56621905 -63662407 + L1_Rod LINE L1 503 712 -6460 1 1016 452 297 77 46 chr13 56622689 56622883 -63661429 + RMER15-int LTR ERVL 1374 1573 -3426 1 1017 1146 75 0 0 chr13 56624990 56625137 -63659175 + B1_Mus1 SINE Alu 2 148 0 1 1017 551 141 474 0 chr13 56625526 56625661 -63658651 - B3 SINE B2 -17 199 1 1 1017 636 192 18 18 chr13 56625976 56626313 -63657999 + (CATATA)n Simple_repeat Simple_repeat 1 337 0 1 1017 615 198 24 0 chr13 56626349 56626516 -63657796 + (CATATA)n Simple_repeat Simple_repeat 6 176 0 1 1017 642 208 11 11 chr13 56626520 56626695 -63657617 + (CATA)n Simple_repeat Simple_repeat 1 175 0 1 1017 211 260 10 20 chr13 56626699 56626801 -63657511 + (CATATA)n Simple_repeat Simple_repeat 6 106 0 1 1017 352 55 36 0 chr13 56627331 56627386 -63656926 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1017 216 97 0 0 chr13 56628748 56628779 -63655533 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1017 366 311 47 13 chr13 56629280 56629430 -63654882 - B4 SINE B4 -3 289 135 1 1017 1077 249 45 3 chr13 56629579 56629869 -63654443 - MTE2a LTR MaLR 0 379 78 1 1017 625 231 6 81 chr13 56629869 56630043 -63654269 + RSINE1 SINE B4 1 161 -4 1 1017 393 84 28 14 chr13 56630060 56630132 -63654180 + (CATA)n Simple_repeat Simple_repeat 2 74 0 1 1017 256 219 78 0 chr13 56630135 56630199 -63654113 - MTE2a LTR MaLR -310 69 1 1 1017 373 161 67 0 chr13 56631093 56631176 -63653136 - L2a LINE L2 0 3426 3288 1 1017 272 356 51 0 chr13 56631275 56631452 -63652860 - MER58B DNA MER1_type -77 264 79 1 1017 195 42 0 0 chr13 56631452 56631476 -63652836 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1017 1471 265 102 80 chr13 56631883 56632809 -63651503 + L1MA4 LINE L1 4061 5009 -1134 1 1017 632 306 24 26 chr13 56632930 56633193 -63651119 + L1MA4 LINE L1 5638 5927 -373 1 1017 2189 281 138 49 chr13 56634031 56634430 -63649882 - Lx8 LINE L1 -9 7464 7014 1 1017 1144 69 14 0 chr13 56634430 56634575 -63649737 - B1_Mus2 SINE Alu 0 147 1 1 1017 2189 281 138 49 chr13 56634575 56635157 -63649155 - Lx8 LINE L1 -460 7013 6396 1 1017 377 313 65 14 chr13 56635129 56635408 -63648904 - L1_Mur3 LINE L1 -1376 4504 4212 1 1017 1603 230 31 29 chr13 56635454 56635870 -63648442 - MTD LTR MaLR 0 419 3 2 1017 491 309 36 12 chr13 56635872 56636099 -63648213 - L1M2 LINE L1 -1698 4149 3911 2 1017 1718 161 65 49 chr13 56636099 56636485 -63647827 - RMER4A LTR ERVK 0 466 75 2 1017 337 211 0 9 chr13 56636721 56636810 -63647502 - L1_Mur3 LINE L1 -2389 3754 3640 1 1017 751 237 84 92 chr13 56637031 56637080 -63647232 + MTD LTR MaLR 32 75 -344 2 1017 1384 69 17 11 chr13 56637080 56637257 -63647055 + B2_Mm2 SINE B2 2 179 -16 2 1017 751 237 84 92 chr13 56637257 56637270 -63647042 + MTD LTR MaLR 76 76 -343 2 1017 212 0 36 0 chr13 56637270 56637298 -63647014 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 1017 751 237 84 92 chr13 56637298 56637485 -63646827 + MTD LTR MaLR 76 280 -139 2 1017 342 0 0 0 chr13 56637529 56637567 -63646745 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 1017 309 332 37 19 chr13 56637604 56637752 -63646560 - L1MA6 LINE L1 -389 5911 5761 2 1017 550 100 10 29 chr13 56637752 56637855 -63646457 - L1Md_T LINE L1 0 6582 6482 2 1017 309 329 48 24 chr13 56637855 56637955 -63646357 - L1MA6 LINE L1 -540 5760 5658 2 1017 180 111 0 0 chr13 56641472 56641499 -63642813 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1017 519 17 0 0 chr13 56641509 56641569 -63642743 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 2 1017 2392 104 3 35 chr13 56641575 56641952 -63642360 - L1_Mus4 LINE L1 0 6636 6272 2 1017 21 36 0 0 chr13 56642297 56642325 -63641987 + AT_rich Low_complexity Low_complexity 1 28 0 2 1017 774 212 0 0 chr13 56642383 56642553 -63641759 + (TA)n Simple_repeat Simple_repeat 2 171 0 2 1017 326 364 117 15 chr13 56642742 56643085 -63641227 - L1ME3B LINE L1 -178 6062 5685 2 1017 570 352 18 23 chr13 56644294 56644512 -63639800 + B4 SINE B4 1 217 -75 2 1017 266 169 59 44 chr13 56644512 56644580 -63639732 + L1M5 LINE L1 5560 5628 -551 2 1017 343 232 78 41 chr13 56644592 56644734 -63639578 - ERVL-int LTR ERVL -3593 2164 1942 2 1017 890 224 16 16 chr13 56644755 56644941 -63639371 + ORR1D1 LTR MaLR 4 189 -185 2 1017 333 0 0 0 chr13 56644948 56644985 -63639327 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1017 592 291 26 5 chr13 56644990 56645180 -63639132 - B4A SINE B4 -98 194 1 2 1017 705 280 113 34 chr13 56645215 56645481 -63638831 + MTEa LTR MaLR 1 287 -92 2 1017 378 0 0 0 chr13 56645483 56645525 -63638787 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2 1017 306 260 0 38 chr13 56645860 56645940 -63638372 + B4 SINE B4 216 292 0 2 1017 360 0 0 0 chr13 56645969 56646009 -63638303 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1017 277 250 0 0 chr13 56647489 56647557 -63636755 - ID4 SINE ID 0 83 16 2 1017 581 223 20 0 chr13 56647699 56647847 -63636465 + HAL1-2a_MD LINE L1 2355 2505 -519 2 1017 398 149 0 11 chr13 56647849 56647937 -63636375 + (CAA)n Simple_repeat Simple_repeat 3 89 0 2 1017 221 0 35 0 chr13 56651617 56651646 -63632666 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1017 623 255 83 42 chr13 56651649 56651817 -63632495 + ID_B1 SINE B4 24 198 -26 2 1017 270 0 0 0 chr13 56651845 56651875 -63632437 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1017 492 116 32 0 chr13 56652291 56652386 -63631926 + (TCTCCC)n Simple_repeat Simple_repeat 4 101 0 2 1017 216 0 0 0 chr13 56653714 56653738 -63630574 + (TTTTTG)n Simple_repeat Simple_repeat 6 29 0 2 1017 1232 28 7 0 chr13 56653738 56653883 -63630429 - B1_Mm SINE Alu 0 147 2 2 1017 379 200 0 130 chr13 56654105 56654220 -63630092 + MT2B LTR ERVL 165 264 -337 2 1017 824 47 0 0 chr13 56654124 56654231 -63630081 + B1_Mus1 SINE Alu 18 124 -24 2 1017 279 0 0 0 chr13 56654231 56654262 -63630050 + (TAA)n Simple_repeat Simple_repeat 1 31 0 2 1017 256 341 32 0 chr13 56655154 56655280 -63629032 - L1MA4 LINE L1 -369 5931 5802 2 1017 236 212 38 0 chr13 56655308 56655388 -63628924 - Lx9 LINE L1 -1 7643 7561 2 1017 1900 236 217 12 chr13 56655380 56656054 -63628258 - Lx9 LINE L1 -979 6665 5854 2 1017 396 97 0 0 chr13 56656475 56656537 -63627775 + (CAGA)n Simple_repeat Simple_repeat 1 62 0 2 1017 614 276 79 26 chr13 56657697 56658019 -63626293 - L1MB7 LINE L1 -19 6165 5826 2 1017 728 83 9 0 chr13 56658048 56658156 -63626156 - B2_Mm2 SINE B2 -86 109 1 2 1017 240 192 39 0 chr13 56658157 56658209 -63626103 - L1MC LINE L1 -638 5695 5642 2 1017 649 303 22 34 chr13 56658387 56658708 -63625604 - L1MB7 LINE L1 -743 5403 5087 2 1017 1286 263 122 99 chr13 56658733 56659480 -63624832 - L1MA10 LINE L1 -2 6332 5601 2 1017 1091 229 9 9 chr13 56659480 56659696 -63624616 + B3 SINE B2 1 216 0 2 1017 1286 263 122 99 chr13 56659696 56659820 -63624492 - L1MA10 LINE L1 -734 5600 5441 2 1017 297 100 0 0 chr13 56659828 56659878 -63624434 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1017 234 292 0 15 chr13 56661226 56661292 -63623020 + GA-rich Low_complexity Low_complexity 4 68 0 2 1017 499 248 202 14 chr13 56661300 56661513 -63622799 - MLT2D LTR ERVL -60 354 102 2 1017 311 304 128 20 chr13 56661525 56661673 -63622639 + RSINE1 SINE B4 2 165 0 2 1017 322 204 26 53 chr13 56661708 56661822 -63622490 - MLT2D LTR ERVL -299 115 5 2 1017 23 0 0 0 chr13 56662438 56662461 -63621851 + AT_rich Low_complexity Low_complexity 1 23 0 2 1017 558 293 21 100 chr13 56663608 56663675 -63620637 - B4A SINE B4 -10 282 222 2 1017 1180 55 7 0 chr13 56663675 56663821 -63620491 - B1_Mus2 SINE Alu 0 147 1 2 1017 558 293 21 100 chr13 56663821 56663992 -63620320 - B4A SINE B4 -71 221 63 2 1017 233 0 62 0 chr13 56664367 56664399 -63619913 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1017 216 0 0 0 chr13 56664693 56664717 -63619595 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 2 1017 1124 157 0 70 chr13 56664739 56664952 -63619360 - Lx5 LINE L1 -92 6958 6761 2 1017 5631 128 29 12 chr13 56664949 56665857 -63618455 + Lx5 LINE L1 5827 6749 -301 2 1017 669 79 66 0 chr13 56666136 56666288 -63618024 + (TAGA)n Simple_repeat Simple_repeat 2 163 0 2 1017 366 47 62 0 chr13 56666316 56666380 -63617932 + (TAGA)n Simple_repeat Simple_repeat 3 70 0 2 1017 558 291 8 0 chr13 56668093 56668227 -63616085 + Tigger5 DNA MER2_type 4 138 -2268 2 1017 1020 72 0 0 chr13 56668321 56668459 -63615853 + (TG)n Simple_repeat Simple_repeat 2 139 0 2 1017 348 194 14 14 chr13 56668463 56668536 -63615776 - B3A SINE B2 -58 140 68 2 1017 468 149 96 1 chr13 56668552 56668677 -63615635 + ORR1A1 LTR MaLR 1 164 -230 2 1017 239 167 0 0 chr13 56668659 56668701 -63615611 + ORR1A1 LTR MaLR 47 88 -238 2 1017 2968 231 81 43 chr13 56668701 56669570 -63614742 - RMER19B LTR ERVK 0 902 1 2 1017 1731 78 4 28 chr13 56669572 56669821 -63614491 + ORR1A2 LTR MaLR 85 327 0 2 1017 238 174 0 0 chr13 56669821 56669863 -63614449 - B3A SINE B2 -156 42 1 2 1017 327 78 0 0 chr13 56670001 56670052 -63614260 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1017 1223 93 55 0 chr13 56670245 56670428 -63613884 - B2_Mm2 SINE B2 -1 194 2 2 1017 263 261 84 32 chr13 56670903 56670998 -63613314 + LTR52 LTR ERVL 26 125 -296 2 1017 316 326 37 29 chr13 56672771 56672907 -63611405 - B1F1 SINE Alu -8 141 5 2 1017 354 45 0 0 chr13 56673816 56673860 -63610452 + (TGG)n Simple_repeat Simple_repeat 1 44 0 2 1017 683 286 5 11 chr13 56675320 56675507 -63608805 - MLT1A0 LTR MaLR 0 365 180 2 1017 618 14 0 0 chr13 56676476 56676547 -63607765 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1017 362 102 0 17 chr13 56678380 56678440 -63605872 + HAL1-3A_ME LINE L1 1969 2027 -831 2 1017 252 256 0 0 chr13 56678458 56678544 -63605768 + (CATA)n Simple_repeat Simple_repeat 3 88 0 2 1017 850 28 0 0 chr13 56678547 56678653 -63605659 + MTB LTR MaLR 1 106 -301 2 1017 345 47 0 0 chr13 56678653 56678696 -63605616 + (TC)n Simple_repeat Simple_repeat 2 44 0 2 1017 448 111 0 22 chr13 56678730 56678822 -63605490 + (GA)n Simple_repeat Simple_repeat 1 90 0 2 1017 246 226 19 0 chr13 56678869 56678922 -63605390 + GA-rich Low_complexity Low_complexity 2 55 0 2 1017 2224 57 13 3 chr13 56678926 56679226 -63605086 + MTB LTR MaLR 98 400 0 2 1017 274 273 0 13 chr13 56679246 56679324 -63604988 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1017 479 236 112 0 chr13 56679574 56679735 -63604577 + MLT1A1 LTR MaLR 150 328 -80 2 1017 854 126 5 128 chr13 56680035 56680253 -63604059 + B2_Mm2 SINE B2 1 191 -4 2 1017 657 194 0 0 chr13 56680631 56680786 -63603526 + (TG)n Simple_repeat Simple_repeat 1 155 0 2 1017 567 242 0 0 chr13 56680816 56680994 -63603318 + (TG)n Simple_repeat Simple_repeat 1 178 0 2 1017 2752 65 5 81 chr13 56681000 56681420 -63602892 + RLTR10 LTR ERVK 1 388 -2 2 1017 381 241 0 0 chr13 56681428 56681561 -63602751 + (TG)n Simple_repeat Simple_repeat 2 134 0 2 1017 455 320 57 29 chr13 56681561 56681770 -63602542 + MLT1I LTR MaLR 178 392 -19 2 1017 258 32 0 0 chr13 56682487 56682518 -63601794 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1017 336 296 51 26 chr13 56682877 56683033 -63601279 - MIR SINE MIR -92 170 11 2 1017 507 33 0 0 chr13 56683287 56683348 -63600964 + (GGGGA)n Simple_repeat Simple_repeat 1 61 0 2 1017 218 172 12 71 chr13 56683919 56684088 -63600224 + C-rich Low_complexity Low_complexity 3 161 0 2 1017 446 233 18 4 chr13 56685694 56685970 -63598342 + (CA)n Simple_repeat Simple_repeat 1 280 0 2 1017 227 215 14 84 chr13 56686295 56686366 -63597946 + ID4_ SINE ID 2 67 -16 2 1017 600 263 15 0 chr13 56686533 56686670 -63597642 - B1_Mur2 SINE Alu 0 149 11 2 1017 332 296 0 0 chr13 56687296 56687377 -63596935 + B1F SINE Alu 2 82 -67 2 1017 207 69 0 0 chr13 56687427 56687456 -63596856 + (TTG)n Simple_repeat Simple_repeat 1 29 0 2 1017 294 274 225 53 chr13 56687774 56688001 -63596311 - MER68 LTR ERVL -273 290 25 2 1017 656 266 56 20 chr13 56688282 56688593 -63595719 - MTE2b LTR MaLR 0 379 18 2 1017 2143 90 23 93 chr13 56688593 56689032 -63595280 - RMER17C LTR ERVK 0 410 3 2 1017 505 289 26 32 chr13 56689032 56689047 -63595265 - MTE2b LTR MaLR -362 17 6 2 1017 723 240 65 0 chr13 56689432 56689586 -63594726 + B3A SINE B2 1 164 -34 2 1017 205 349 151 0 chr13 56689922 56690028 -63594284 + MIR3 SINE MIR 59 180 -28 2 1017 211 357 70 13 chr13 56691387 56691543 -63592769 - L2a LINE L2 -13 3413 3249 2 1017 387 0 0 0 chr13 56691633 56691676 -63592636 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 1017 387 342 23 58 chr13 56692327 56692498 -63591814 + FordPrefect DNA Tip100 239 403 -1280 2 1017 270 335 55 87 chr13 56692567 56692750 -63591562 + FordPrefect DNA Tip100 646 822 -861 2 1017 303 260 69 62 chr13 56693327 56693487 -63590825 + HAL1-3A_ME LINE L1 2284 2444 -414 2 1017 204 364 0 0 chr13 56694862 56694939 -63589373 + (TG)n Simple_repeat Simple_repeat 1 77 0 2 1017 851 256 46 32 chr13 56694945 56695227 -63589085 - B4A SINE B4 -4 288 3 3 1017 392 0 21 0 chr13 56697131 56697179 -63587133 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1017 217 150 25 0 chr13 56697196 56697236 -63587076 + MER5B DNA MER1_type 3 43 -135 3 1017 661 292 67 8 chr13 56697246 56697501 -63586811 + L1MA4 LINE L1 5879 6148 -152 3 1017 432 303 97 130 chr13 56697531 56697892 -63586420 - ORR1E LTR MaLR -10 349 1 3 1017 324 301 49 0 chr13 56697893 56698016 -63586296 + L1MA4 LINE L1 6158 6286 -14 3 1017 238 224 62 50 chr13 56698997 56699077 -63585235 + Charlie2a DNA MER1_type 1582 1662 -1199 3 1017 227 365 94 6 chr13 56699206 56699366 -63584946 + MIRb SINE MIR 26 199 -69 3 1017 552 277 0 66 chr13 56703410 56703576 -63580736 + RSINE1 SINE B4 3 157 -8 3 1017 442 41 0 75 chr13 56703576 56703682 -63580630 + (CTAA)n Simple_repeat Simple_repeat 3 100 0 3 1017 376 228 0 0 chr13 56703891 56703970 -63580342 - ID4_ SINE ID -2 81 3 3 1017 315 176 13 39 chr13 56704217 56704294 -63580018 - B1_Mur1 SINE Alu -2 147 73 3 1017 280 338 30 30 chr13 56704967 56705132 -63579180 + MIR SINE MIR 9 173 -89 3 1017 604 53 200 0 chr13 56705579 56705674 -63578638 + B1_Mus1 SINE Alu 14 127 -21 3 1017 234 0 0 0 chr13 56705684 56705710 -63578602 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1017 311 331 81 0 chr13 56707866 56707990 -63576322 - MER5A1 DNA MER1_type -32 134 1 3 1017 198 0 0 0 chr13 56708082 56708104 -63576208 + (CACG)n Simple_repeat Simple_repeat 3 24 0 3 1017 251 328 98 0 chr13 56709274 56709396 -63574916 + L2 LINE L2 2332 2465 -954 3 1017 198 0 0 0 chr13 56709445 56709467 -63574845 + (CAG)n Simple_repeat Simple_repeat 1 22 0 3 1017 781 328 48 35 chr13 56709533 56709906 -63574406 - MTEa LTR MaLR 0 379 2 3 1017 186 179 26 0 chr13 56713480 56713519 -63570793 - MIRc SINE MIR -117 151 112 3 1017 261 235 20 133 chr13 56714406 56714504 -63569808 - ID_B1 SINE B4 -28 196 110 3 1017 310 225 10 156 chr13 56714504 56714535 -63569777 - B1F SINE Alu -25 108 8 3 1017 369 0 0 0 chr13 56715742 56715783 -63568529 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1017 504 45 0 0 chr13 56715844 56715911 -63568401 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1017 455 87 14 0 chr13 56716127 56716196 -63568116 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1017 312 254 204 31 chr13 56716344 56716535 -63567777 + MIR SINE MIR 2 225 -37 3 1017 216 0 0 0 chr13 56717906 56717930 -63566382 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1017 1809 113 62 91 chr13 56719397 56719815 -63564497 - RMER17C LTR ERVK 0 410 5 3 1017 249 250 0 15 chr13 56720237 56720302 -63564010 + MLT1D LTR MaLR 148 211 -294 3 1017 615 254 78 6 chr13 56720389 56720555 -63563757 + MLT1D LTR MaLR 326 503 -2 3 1017 293 375 0 0 chr13 56722329 56722425 -63561887 + (CATATA)n Simple_repeat Simple_repeat 3 98 0 3 1017 302 67 0 22 chr13 56722804 56722850 -63561462 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1017 432 320 80 0 chr13 56722852 56723002 -63561310 - RSINE1 SINE B4 0 165 4 3 1017 466 236 7 7 chr13 56725038 56725183 -63559129 + GA-rich Low_complexity Low_complexity 2 146 0 3 1017 1056 103 0 0 chr13 56725190 56725346 -63558966 + (GAA)n Simple_repeat Simple_repeat 2 157 0 3 1017 524 172 0 10 chr13 56726035 56726135 -63558177 + B1F1 SINE Alu 3 101 -48 3 1017 263 283 77 93 chr13 56726043 56726226 -63558086 + MT2B LTR ERVL 175 354 -247 3 1017 182 297 47 0 chr13 56728060 56728124 -63556188 + L3b LINE CR1 220 286 -196 3 1017 182 352 100 6 chr13 56728953 56729113 -63555199 - L2c LINE L2 -241 3146 2972 3 1017 316 269 35 20 chr13 56730745 56730845 -63553467 - MIR SINE MIR -141 127 19 3 1017 24 0 0 0 chr13 56732784 56732808 -63551504 + AT_rich Low_complexity Low_complexity 1 24 0 3 1017 1008 63 22 33 chr13 56734632 56734813 -63549499 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 3 1017 497 126 36 0 chr13 56734816 56734927 -63549385 + CT-rich Low_complexity Low_complexity 3 117 0 3 1017 1026 69 35 0 chr13 56734928 56735102 -63549210 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 3 1017 198 0 0 0 chr13 56735286 56735308 -63549004 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1017 1179 101 45 0 chr13 56738106 56738285 -63546027 - B2_Mm2 SINE B2 -7 188 2 3 1017 321 180 0 0 chr13 56739230 56739291 -63545021 + B1_Mur1 SINE Alu 55 115 -34 3 1017 205 209 47 0 chr13 56739291 56739334 -63544978 + GA-rich Low_complexity Low_complexity 1 45 0 3 1017 216 259 17 0 chr13 56739563 56739621 -63544691 + MIR SINE MIR 122 180 -82 3 1017 236 328 120 8 chr13 56739797 56739914 -63544398 + B1F1 SINE Alu 1 130 -19 3 1017 251 0 59 0 chr13 56741139 56741173 -63543139 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3 1017 584 106 11 0 chr13 56741550 56741644 -63542668 + (CA)n Simple_repeat Simple_repeat 2 96 0 3 1017 543 280 32 5 chr13 56741774 56741961 -63542351 + B3A SINE B2 1 192 -6 3 1017 2341 73 3 0 chr13 56742161 56742478 -63541834 - ORR1A2 LTR MaLR -9 318 1 3 1017 700 247 61 35 chr13 56742834 56743031 -63541281 + B3 SINE B2 4 205 -11 3 1017 309 328 54 39 chr13 56746062 56746192 -63538120 + B4A SINE B4 13 144 -148 3 1017 231 319 0 28 chr13 56746912 56746983 -63537329 - ID4 SINE ID -11 72 4 3 1017 356 266 115 119 chr13 56747189 56747475 -63536837 + MLT1E2 LTR MaLR 279 563 -64 3 1017 710 113 0 9 chr13 56747637 56747753 -63536559 + (GGAAA)n Simple_repeat Simple_repeat 3 117 0 3 1017 626 141 165 0 chr13 56747788 56747909 -63536403 + B1_Mur4 SINE Alu 9 149 -1 3 1017 256 209 17 43 chr13 56747909 56748024 -63536288 + (CAAA)n Simple_repeat Simple_repeat 1 112 0 3 1017 264 314 0 79 chr13 56748026 56748127 -63536185 - PB1D7 SINE Alu -16 104 12 3 1017 1471 256 47 17 chr13 56748299 56748705 -63535607 + MTD LTR MaLR 1 418 -1 3 1017 377 245 43 0 chr13 56750161 56750255 -63534057 + RSINE1 SINE B4 3 100 -65 3 1017 675 141 42 23 chr13 56750333 56750816 -63533496 + (CA)n Simple_repeat Simple_repeat 1 492 0 3 1017 297 51 0 0 chr13 56750817 56750856 -63533456 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 3 1017 511 279 63 12 chr13 56750898 56751058 -63533254 + MTD LTR MaLR 1 173 -246 3 1017 690 141 0 0 chr13 56751058 56751200 -63533112 + (TG)n Simple_repeat Simple_repeat 2 143 0 3 1017 385 189 128 43 chr13 56751200 56751294 -63533018 + MTD LTR MaLR 225 326 -93 3 1017 434 168 0 9 chr13 56751305 56751419 -63532893 + (TG)n Simple_repeat Simple_repeat 1 113 0 3 1017 985 298 47 25 chr13 56751423 56751826 -63532486 - Lx8 LINE L1 -127 7346 6935 3 1017 650 247 96 0 chr13 56751923 56752089 -63532223 + B3A SINE B2 1 182 -16 3 1017 327 181 0 0 chr13 56752089 56752161 -63532151 + (CA)n Simple_repeat Simple_repeat 1 72 0 3 1017 286 231 32 32 chr13 56752774 56752868 -63531444 + CT-rich Low_complexity Low_complexity 1 94 0 3 1017 704 136 61 149 chr13 56752868 56753049 -63531263 + ORR1B2 LTR MaLR 1 165 -202 3 1017 873 76 0 0 chr13 56753050 56753168 -63531144 + (TTC)n Simple_repeat Simple_repeat 2 119 0 3 1017 448 97 54 0 chr13 56753169 56753262 -63531050 + CT-rich Low_complexity Low_complexity 1 98 0 3 1017 1212 158 0 10 chr13 56753263 56753468 -63530844 + ORR1B2 LTR MaLR 156 358 -9 3 1017 252 241 46 82 chr13 56753476 56753670 -63530642 + RMER17A LTR ERVK 345 531 -220 3 1018 1926 193 147 21 chr13 56754445 56754968 -63529344 + RMER13A LTR ERVK 92 680 -180 3 1018 324 312 87 60 chr13 56754984 56755236 -63529076 + RMER13A LTR ERVK 602 860 0 3 1018 845 241 54 10 chr13 56755352 56755391 -63528921 - B3 SINE B2 0 216 168 3 1018 219 69 0 0 chr13 56755391 56755420 -63528892 + (TATG)n Simple_repeat Simple_repeat 4 32 0 3 1018 845 241 54 10 chr13 56755420 56755585 -63528727 - B3 SINE B2 -49 167 3 3 1018 420 360 100 28 chr13 56756323 56756683 -63527629 - L2 LINE L2 -667 2752 2367 3 1018 239 0 0 31 chr13 56756702 56756734 -63527578 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1018 312 211 42 0 chr13 56756763 56756834 -63527478 - B3 SINE B2 -65 151 78 3 1018 186 191 0 0 chr13 56757065 56757112 -63527200 + G-rich Low_complexity Low_complexity 1 47 0 3 1018 234 263 126 39 chr13 56758460 56758563 -63525749 + B4A SINE B4 39 150 -142 3 1018 324 0 0 0 chr13 56758628 56758664 -63525648 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1018 1588 183 63 52 chr13 56758682 56759045 -63525267 + ORR1B2 LTR MaLR 1 367 0 3 1018 352 278 8 25 chr13 56760468 56760586 -63523726 + L1M5 LINE L1 5543 5658 -506 3 1018 810 197 93 0 chr13 56760596 56760789 -63523523 + B3 SINE B2 2 212 -4 3 1018 1571 185 65 14 chr13 56760845 56761201 -63523111 + ORR1D1 LTR MaLR 1 374 0 3 1018 272 315 101 14 chr13 56761541 56761689 -63522623 + RMER15 LTR ERVL 343 503 -72 3 1018 302 67 22 0 chr13 56761940 56761985 -63522327 + (TGGGGG)n Simple_repeat Simple_repeat 2 47 0 3 1018 1142 186 22 31 chr13 56762082 56762309 -63522003 - URR1B DNA MER1_type 0 225 1 3 1018 769 227 20 44 chr13 56762471 56762674 -63521638 + B3A SINE B2 1 198 0 3 1018 593 230 6 0 chr13 56762722 56762900 -63521412 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1018 528 318 0 28 chr13 56762900 56763081 -63521231 + (TATG)n Simple_repeat Simple_repeat 4 179 0 3 1018 286 316 31 0 chr13 56764645 56764743 -63519569 - MTEb LTR MaLR 0 379 279 3 1018 2044 161 31 0 chr13 56765178 56765531 -63518781 + ORR1B2 LTR MaLR 4 367 0 3 1018 924 129 0 0 chr13 56767054 56767201 -63517111 + (TCCC)n Simple_repeat Simple_repeat 2 148 0 3 1018 324 304 0 34 chr13 56767232 56767351 -63516961 + PB1D10 SINE Alu 1 115 -2 3 1018 415 243 64 18 chr13 56767359 56767468 -63516844 + B1F SINE Alu 13 126 -23 3 1018 35 41 0 0 chr13 56767564 56767613 -63516699 + AT_rich Low_complexity Low_complexity 1 49 0 4 1018 543 31 0 0 chr13 56767714 56767779 -63516533 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 1018 308 235 183 0 chr13 56767779 56767894 -63516418 - Lx9 LINE L1 -188 7456 7321 4 1018 884 142 0 26 chr13 56767938 56768090 -63516222 + B1_Mur3 SINE Alu 2 149 0 4 1018 1239 178 34 180 chr13 56768125 56768563 -63515749 + ORR1D1 LTR MaLR 1 374 0 4 1018 471 298 144 8 chr13 56768757 56768935 -63515377 - B4A SINE B4 -8 284 79 4 1018 252 0 0 0 chr13 56768935 56768963 -63515349 + (TGGGGG)n Simple_repeat Simple_repeat 2 29 0 4 1018 471 298 144 8 chr13 56768963 56769034 -63515278 - B4A SINE B4 -214 78 3 4 1018 216 86 0 0 chr13 56769368 56769403 -63514909 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1018 1105 240 45 26 chr13 56769446 56769754 -63514558 + RLTR10D LTR ERVK 46 359 0 4 1018 422 239 9 9 chr13 56769799 56769909 -63514403 - PB1D10 SINE Alu -6 111 2 4 1018 349 300 128 30 chr13 56770003 56770268 -63514044 - B4A SINE B4 -1 291 1 4 1018 588 321 88 12 chr13 56770776 56771126 -63513186 - L1MA4A LINE L1 -1567 5906 5566 4 1018 324 119 0 0 chr13 56771229 56771288 -63513024 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1018 425 301 17 0 chr13 56771319 56771495 -63512817 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1018 404 216 7 0 chr13 56771546 56771694 -63512618 + (TG)n Simple_repeat Simple_repeat 2 150 0 4 1018 297 0 0 0 chr13 56771694 56771727 -63512585 + (GA)n Simple_repeat Simple_repeat 1 33 0 4 1018 259 297 66 0 chr13 56771754 56771845 -63512467 - PB1D7 SINE Alu -22 98 2 4 1018 428 181 0 137 chr13 56772267 56772472 -63511840 + (CCCTAA)n Simple_repeat Simple_repeat 1 177 0 4 1018 672 228 0 0 chr13 56773219 56773438 -63510874 + (CA)n Simple_repeat Simple_repeat 1 219 0 4 1018 538 259 30 0 chr13 56773899 56774034 -63510278 - ID_B1 SINE B4 -85 139 1 4 1018 26 30 0 0 chr13 56774042 56774075 -63510237 + AT_rich Low_complexity Low_complexity 1 33 0 4 1018 518 284 48 126 chr13 56774124 56774498 -63509814 - RLTR15 LTR ERVK -13 346 2 4 1018 648 214 79 54 chr13 56774498 56774652 -63509660 + B3 SINE B2 24 179 -37 4 1018 223 0 0 98 chr13 56774652 56774693 -63509619 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 4 1018 648 214 79 54 chr13 56774693 56774726 -63509586 + B3 SINE B2 180 216 0 4 1018 300 104 0 72 chr13 56776998 56777081 -63507231 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 4 1018 205 288 150 0 chr13 56777500 56777580 -63506732 + MIRc SINE MIR 57 148 -120 4 1018 218 357 32 38 chr13 56777592 56777721 -63506591 - L2b LINE L2 -4 3422 3286 4 1018 1069 149 100 43 chr13 56778044 56778254 -63506058 + URR1A DNA MER1_type 5 226 0 4 1018 324 0 0 0 chr13 56779777 56779813 -63504499 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1018 207 0 0 0 chr13 56780737 56780760 -63503552 + (CTTTG)n Simple_repeat Simple_repeat 4 26 0 4 1018 540 174 44 35 chr13 56780769 56780882 -63503430 - PB1D10 SINE Alu -1 116 3 4 1018 368 223 1 0 chr13 56781119 56781197 -63503115 + MIRm SINE MIR 95 173 -95 4 1018 1447 209 114 30 chr13 56781772 56782141 -63502171 + MTD LTR MaLR 20 419 0 4 1018 310 311 113 31 chr13 56782280 56782509 -63501803 + L1MD LINE L1 3057 3304 -2842 4 1018 336 48 0 0 chr13 56783075 56783117 -63501195 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1018 414 134 0 0 chr13 56783562 56783629 -63500683 + (TCCC)n Simple_repeat Simple_repeat 2 68 0 4 1018 640 108 20 0 chr13 56784421 56784523 -63499789 - B1_Mur3 SINE Alu 0 149 46 4 1018 263 171 22 109 chr13 56784454 56784546 -63499766 - RLTR25A LTR ERVK -516 587 504 4 1018 318 267 148 33 chr13 56785027 56785209 -63499103 - MLT1A0 LTR MaLR -162 203 1 4 1018 26 0 0 0 chr13 56785396 56785422 -63498890 + AT_rich Low_complexity Low_complexity 1 26 0 4 1018 195 69 0 0 chr13 56785485 56785514 -63498798 + (TCTCTG)n Simple_repeat Simple_repeat 4 32 0 4 1018 384 247 33 11 chr13 56786117 56786230 -63498082 + B1F2 SINE Alu 5 120 0 4 1018 221 294 238 7 chr13 56786230 56786264 -63498048 + B4 SINE B4 90 270 -22 4 1018 317 273 34 11 chr13 56786972 56787061 -63497251 - L2b LINE L2 -1 3374 3284 4 1018 233 354 99 19 chr13 56787930 56788091 -63496221 + L2c LINE L2 2977 3150 -237 4 1018 2311 171 25 5 chr13 56788144 56788549 -63495763 - MTC LTR MaLR -8 413 1 4 1018 184 257 53 137 chr13 56788582 56788713 -63495599 + L2c LINE L2 3268 3387 0 4 1018 366 293 0 0 chr13 56789490 56789657 -63494655 + (CA)n Simple_repeat Simple_repeat 2 168 0 4 1018 183 156 0 0 chr13 56789680 56789712 -63494600 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1018 226 331 6 23 chr13 56791528 56791704 -63492608 + CT-rich Low_complexity Low_complexity 3 175 0 4 1018 222 373 0 25 chr13 56791657 56791819 -63492493 + (CCTG)n Simple_repeat Simple_repeat 3 160 0 4 1018 227 333 191 0 chr13 56794052 56794193 -63490119 + MIRc SINE MIR 3 170 -98 4 1018 387 215 5 11 chr13 56794360 56794442 -63489870 - B3 SINE B2 -111 82 3 4 1018 213 121 0 0 chr13 56794857 56794890 -63489422 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 1018 368 271 104 0 chr13 56794891 56794987 -63489325 - PB1D10 SINE Alu -5 112 7 4 1018 212 147 0 0 chr13 56795196 56795230 -63489082 + (CATG)n Simple_repeat Simple_repeat 3 36 0 4 1018 396 310 30 23 chr13 56795251 56795383 -63488929 + B4A SINE B4 2 134 -158 4 1018 230 263 26 159 chr13 56795623 56795736 -63488576 + MIRm SINE MIR 149 246 -30 4 1018 448 224 6 11 chr13 56795744 56795925 -63488387 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1018 206 252 8 0 chr13 56795944 56796075 -63488237 + (TG)n Simple_repeat Simple_repeat 1 132 0 4 1018 973 262 16 56 chr13 56796081 56796384 -63487928 - B4A SINE B4 0 292 2 4 1018 366 23 0 0 chr13 56796429 56796472 -63487840 + (TGAA)n Simple_repeat Simple_repeat 4 46 0 4 1018 283 255 278 21 chr13 56797317 56797461 -63486851 + B3A SINE B2 3 183 -15 4 1018 246 329 79 0 chr13 56797525 56797601 -63486711 + L2a LINE L2 3330 3411 -15 4 1018 408 290 32 0 chr13 56797802 56797895 -63486417 - B1F1 SINE Alu -53 96 1 4 1018 261 182 14 70 chr13 56798281 56798352 -63485960 + B4A SINE B4 6 72 -220 4 1018 380 271 0 6 chr13 56798415 56798586 -63485726 + (CA)n Simple_repeat Simple_repeat 2 171 0 4 1018 655 324 112 35 chr13 56798621 56798969 -63485343 - MLT1K LTR MaLR -74 521 147 4 1018 235 65 0 42 chr13 56799230 56799278 -63485034 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 4 1018 600 347 18 4 chr13 56799468 56799694 -63484618 - MIR SINE MIR -17 245 17 4 1018 335 291 17 60 chr13 56800276 56800393 -63483919 - Charlie4z DNA MER1_type -35 132 21 4 1018 511 136 0 20 chr13 56800439 56800537 -63483775 + CT-rich Low_complexity Low_complexity 2 97 0 4 1018 560 209 0 35 chr13 56800607 56800721 -63483591 - PB1D10 SINE Alu -7 110 1 4 1018 811 234 28 32 chr13 56800851 56801067 -63483245 - B3 SINE B2 0 216 2 4 1018 23 0 0 0 chr13 56801548 56801571 -63482741 + AT_rich Low_complexity Low_complexity 1 23 0 4 1018 25 0 0 0 chr13 56801593 56801618 -63482694 + AT_rich Low_complexity Low_complexity 1 25 0 4 1018 1205 165 61 5 chr13 56801912 56802125 -63482187 + URR1B DNA MER1_type 1 225 0 4 1018 198 157 29 29 chr13 56802277 56802382 -63481930 + (TA)n Simple_repeat Simple_repeat 2 106 0 4 1018 249 339 0 0 chr13 56803112 56803177 -63481135 + MER102b DNA MER1_type 3 67 -274 4 1018 344 314 108 60 chr13 56803287 56803453 -63480859 + MER102b DNA MER1_type 115 294 -47 4 1018 29 28 0 0 chr13 56804326 56804362 -63479950 + GC_rich Low_complexity Low_complexity 1 36 0 4 1018 24 85 0 0 chr13 56804713 56804772 -63479540 + GC_rich Low_complexity Low_complexity 1 59 0 4 1018 324 83 0 0 chr13 56804842 56804890 -63479422 + (CCCG)n Simple_repeat Simple_repeat 1 48 0 4 1018 297 0 0 0 chr13 56805210 56805243 -63479069 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1018 486 188 90 5 chr13 56805592 56805705 -63478607 - PB1D7 SINE Alu 0 120 1 4 1018 261 202 186 23 chr13 56806101 56806187 -63478125 + PB1D9 SINE Alu 1 100 -20 4 1018 540 0 0 0 chr13 56806354 56806414 -63477898 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 4 1018 514 250 78 16 chr13 56806415 56806551 -63477761 - ID_B1 SINE B4 -13 211 68 4 1018 847 152 0 35 chr13 56807904 56808047 -63476265 - B1_Mur2 SINE Alu 0 149 12 4 1018 301 280 33 132 chr13 56807940 56808092 -63476220 - MT2B LTR ERVL -338 263 127 4 1018 180 0 0 0 chr13 56808938 56808958 -63475354 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1018 351 208 202 0 chr13 56809424 56809553 -63474759 - B3A SINE B2 -11 205 2 4 1018 273 57 0 0 chr13 56809615 56809650 -63474662 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1018 694 156 101 22 chr13 56810024 56810162 -63474150 - B1_Mur2 SINE Alu 0 149 1 4 1018 26 0 0 0 chr13 56810166 56810192 -63474120 + AT_rich Low_complexity Low_complexity 1 26 0 4 1018 413 110 0 14 chr13 56810192 56810266 -63474046 + (TCTCC)n Simple_repeat Simple_repeat 1 73 0 4 1018 443 264 73 67 chr13 56810294 56810473 -63473839 - B3A SINE B2 -18 180 1 4 1018 210 322 95 9 chr13 56810810 56810926 -63473386 + PB1 SINE Alu 1 126 -1 4 1018 368 280 175 26 chr13 56811781 56812049 -63472263 + L2 LINE L2 2441 2748 -671 4 1018 1426 192 118 77 chr13 56812555 56813025 -63471287 + RLTR20A1 LTR ERVK 1 536 -42 4 1018 210 91 0 0 chr13 56813025 56813058 -63471254 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1018 507 198 19 65 chr13 56813060 56813168 -63471144 + RLTR20A1 LTR ERVK 447 549 -2 4 1018 372 275 206 0 chr13 56813256 56813445 -63470867 - L1MB8 LINE L1 -111 6067 5840 4 1018 385 185 152 0 chr13 56813871 56813963 -63470349 - B3A SINE B2 -92 106 1 4 1018 3074 6 48 3 chr13 56814241 56814592 -63469720 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1018 55520 29 16 3 chr13 56814592 56820987 -63463325 - IAPEz-int LTR ERVK 0 6481 8 4 1018 3098 3 48 3 chr13 56820987 56821338 -63462974 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1018 778 216 15 45 chr13 56821366 56821554 -63462758 - B3 SINE B2 -7 186 1 4 1018 524 228 165 5 chr13 56821972 56822161 -63462151 - L1M5 LINE L1 -456 5706 5491 5 1018 2025 294 157 32 chr13 56822174 56823534 -63460778 - L1M2 LINE L1 -237 5643 4091 5 1018 1048 86 73 88 chr13 56823534 56823726 -63460586 - B2_Mm2 SINE B2 -6 189 1 5 1018 2025 292 157 33 chr13 56823726 56824201 -63460111 - L1M2 LINE L1 -2025 4118 3572 5 1018 325 258 101 0 chr13 56825682 56825771 -63458541 - HAL1-3A_ME LINE L1 -786 2072 1975 5 1018 229 26 53 0 chr13 56825908 56825946 -63458366 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 5 1018 261 282 51 0 chr13 56826286 56826364 -63457948 - ID4 SINE ID 0 83 2 5 1018 475 339 93 49 chr13 56826516 56827010 -63457302 - MLT1E1 LTR MaLR -4 650 48 5 1018 324 335 72 28 chr13 56827845 56828024 -63456288 + MIR SINE MIR 37 223 -45 5 1018 33 25 0 0 chr13 56829390 56829430 -63454882 + AT_rich Low_complexity Low_complexity 1 40 0 5 1018 338 272 54 32 chr13 56830007 56830140 -63454172 - ID4_ SINE ID -23 129 2 5 1018 543 146 297 84 chr13 56830257 56830459 -63453853 - RMER1B Other Other -18 1048 786 5 1018 305 306 112 34 chr13 56830465 56830644 -63453668 - L1ME2 LINE L1 -263 5901 5709 5 1018 541 237 42 46 chr13 56830686 56830903 -63453409 - L1M4 LINE L1 -3471 2675 2460 5 1018 702 308 86 57 chr13 56830903 56831540 -63452772 - L1MB4 LINE L1 -55 6125 5470 5 1018 560 265 62 93 chr13 56831723 56831948 -63452364 + B4A SINE B4 1 218 -74 5 1018 577 332 96 64 chr13 56832432 56832776 -63451536 + MLT1A LTR MaLR 18 372 -2 5 1018 380 298 154 6 chr13 56832831 56833000 -63451312 + MLT1A-int LTR MaLR 434 627 -744 5 1018 258 274 89 195 chr13 56833357 56833483 -63450829 + MLT1A LTR MaLR 35 170 -220 5 1018 291 338 48 58 chr13 56833483 56833775 -63450537 + B4 SINE B4 1 289 -3 5 1018 313 260 62 186 chr13 56833775 56834042 -63450270 + MLT1A LTR MaLR 171 386 -4 5 1018 210 37 0 0 chr13 56834778 56834805 -63449507 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 5 1018 315 191 0 0 chr13 56834817 56834880 -63449432 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 1018 556 198 0 25 chr13 56835285 56835404 -63448908 + PB1D10 SINE Alu 1 116 -1 5 1018 1693 142 76 0 chr13 56835953 56836255 -63448057 - ORR1A3 LTR MaLR 0 326 2 5 1018 946 204 41 0 chr13 56836456 56836652 -63447660 - B3 SINE B2 -7 209 6 5 1018 504 0 0 0 chr13 56837914 56837970 -63446342 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 5 1018 399 296 18 9 chr13 56841152 56841261 -63443051 - ID_B1 SINE B4 -93 131 22 5 1018 372 176 364 18 chr13 56841564 56841674 -63442638 + B1_Mus1 SINE Alu 1 148 0 5 1018 580 257 49 25 chr13 56842200 56842360 -63441952 - B1F2 SINE Alu 0 311 12 5 1018 290 314 113 0 chr13 56844080 56844256 -63440056 + MIRb SINE MIR 58 266 -2 5 1018 227 275 104 38 chr13 56844363 56844469 -63439843 - RSINE1 SINE B4 0 165 53 5 1018 189 0 0 0 chr13 56844511 56844532 -63439780 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1018 368 252 219 30 chr13 56845352 56845516 -63438796 - ID_B1 SINE B4 -1 223 29 5 1018 508 238 54 7 chr13 56845810 56845958 -63438354 - B4A SINE B4 -23 269 115 5 1018 258 32 0 0 chr13 56845961 56845992 -63438320 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1018 279 0 0 0 chr13 56846089 56846120 -63438192 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1018 273 57 0 0 chr13 56846159 56846194 -63438118 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1018 408 20 0 0 chr13 56846233 56846282 -63438030 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1018 411 38 0 0 chr13 56846321 56846374 -63437938 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1018 351 0 0 0 chr13 56846413 56846452 -63437860 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1018 336 24 0 0 chr13 56846491 56846532 -63437780 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1018 261 0 0 0 chr13 56846571 56846600 -63437712 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1018 369 0 0 0 chr13 56846641 56846682 -63437630 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1018 318 26 0 0 chr13 56846721 56846760 -63437552 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1018 450 0 0 0 chr13 56846799 56846849 -63437463 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1018 279 0 0 0 chr13 56846886 56846917 -63437395 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1018 220 246 36 145 chr13 56846920 56846956 -63437356 - B4 SINE B4 -144 148 115 5 1018 423 0 0 0 chr13 56846956 56847003 -63437309 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1018 220 246 36 145 chr13 56847003 56847047 -63437265 - B4 SINE B4 -178 114 84 5 1018 198 0 0 0 chr13 56847047 56847069 -63437243 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1018 220 246 36 145 chr13 56847069 56847153 -63437159 - B4 SINE B4 -209 83 1 5 1018 1010 244 112 16 chr13 56847181 56847555 -63436757 - Lx9 LINE L1 -35 7609 7200 5 1018 1368 224 88 12 chr13 56847568 56848098 -63436214 + Lx9 LINE L1 5504 6109 -1535 5 1018 563 250 175 0 chr13 56848141 56848301 -63436011 + Lx9 LINE L1 6308 6495 -1149 5 1018 180 306 115 18 chr13 56849260 56849373 -63434939 - L2c LINE L2 -8 3379 3256 5 1018 295 265 220 17 chr13 56850918 56851091 -63433221 - MIRb SINE MIR -35 233 26 5 1018 645 278 71 0 chr13 56851370 56851539 -63432773 - MLT1B LTR MaLR -12 378 198 5 1018 306 0 0 0 chr13 56852072 56852106 -63432206 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 5 1018 231 288 35 18 chr13 56852838 56852951 -63431361 + Charlie4z DNA MER1_type 50 164 -3 5 1018 503 154 46 37 chr13 56853101 56853209 -63431103 + PB1D9 SINE Alu 8 116 -4 5 1018 224 59 29 0 chr13 56855790 56855824 -63428488 + (TGGGGG)n Simple_repeat Simple_repeat 1 35 0 5 1018 760 209 178 105 chr13 56855898 56856129 -63428183 + MTD LTR MaLR 14 263 -156 5 1018 1204 34 0 0 chr13 56856129 56856276 -63428036 - B1_Mus2 SINE Alu 0 147 1 5 1018 760 209 178 105 chr13 56856276 56856386 -63427926 + MTD LTR MaLR 264 380 -39 5 1018 197 33 33 0 chr13 56856713 56856743 -63427569 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1018 343 214 48 58 chr13 56860049 56860153 -63424159 - PB1D7 SINE Alu -1 119 17 5 1018 326 290 128 21 chr13 56860355 56860496 -63423816 - Arthur1B DNA Tip100 -12 1213 1058 5 1018 1763 170 16 52 chr13 56860548 56860915 -63423397 + ORR1B2 LTR MaLR 6 359 -8 5 1018 480 286 167 39 chr13 56861481 56861787 -63422525 + MER2 DNA MER2_type 1 345 0 5 1018 1326 211 151 0 chr13 56862708 56863045 -63421267 - MTD LTR MaLR 0 419 32 5 1018 420 71 0 0 chr13 56863084 56863140 -63421172 + (ATGTG)n Simple_repeat Simple_repeat 1 56 0 5 1018 216 0 0 0 chr13 56863554 56863578 -63420734 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1018 639 0 0 0 chr13 56863580 56863651 -63420661 + (GA)n Simple_repeat Simple_repeat 2 72 0 5 1018 446 232 10 0 chr13 56865526 56865625 -63418687 - B3A SINE B2 -98 100 1 5 1018 662 331 56 90 chr13 56865632 56865813 -63418499 - MLT1H2 LTR MaLR -67 422 244 5 1018 1239 75 29 0 chr13 56865813 56865986 -63418326 - B2_Mm2 SINE B2 -14 181 4 5 1018 662 331 56 90 chr13 56865986 56866236 -63418076 - MLT1H2 LTR MaLR -246 243 6 5 1018 403 240 162 21 chr13 56866814 56867097 -63417215 + ORR1E LTR MaLR 1 413 -6 5 1018 200 288 0 17 chr13 56868511 56868571 -63415741 + CT-rich Low_complexity Low_complexity 2 60 0 5 1018 1112 210 159 129 chr13 56869148 56869166 -63415146 + RMER4B LTR ERVK 17 34 -551 5 1018 255 61 0 0 chr13 56869166 56869199 -63415113 + (CAAAG)n Simple_repeat Simple_repeat 2 34 0 5 1018 1112 210 159 129 chr13 56869199 56869498 -63414814 + RMER4B LTR ERVK 35 339 -246 5 1018 357 24 0 0 chr13 56869498 56869540 -63414772 + (TAG)n Simple_repeat Simple_repeat 2 43 0 5 1018 1112 210 159 129 chr13 56869540 56869756 -63414556 + RMER4B LTR ERVK 340 566 -19 5 1018 509 194 11 49 chr13 56870307 56870491 -63413821 + CT-rich Low_complexity Low_complexity 3 179 0 5 1018 459 0 0 0 chr13 56870815 56870866 -63413446 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1018 387 0 0 0 chr13 56870866 56870908 -63413404 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 1018 238 138 0 70 chr13 56871633 56871719 -63412593 + C-rich Low_complexity Low_complexity 1 80 0 5 1018 1011 181 80 0 chr13 56872262 56872461 -63411851 - B3 SINE B2 0 216 2 5 1018 390 55 0 0 chr13 56872524 56872579 -63411733 + B1_Mur4 SINE Alu 1 55 -95 5 1018 597 201 0 0 chr13 56872589 56872795 -63411517 + GA-rich Low_complexity Low_complexity 1 206 0 5 1018 313 182 62 38 chr13 56872801 56872881 -63411431 + RLTR25B LTR ERVK 428 509 -519 5 1018 771 39 0 19 chr13 56872814 56872918 -63411394 + B1_Mm SINE Alu 40 141 -6 5 1018 198 0 0 0 chr13 56872922 56872944 -63411368 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 5 1018 360 326 94 80 chr13 56873387 56873750 -63410562 - MER47B DNA MER2_type -6 412 45 5 1018 324 120 0 0 chr13 56873783 56873833 -63410479 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 5 1018 333 0 0 0 chr13 56874719 56874756 -63409556 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1018 420 20 0 0 chr13 56875319 56875368 -63408944 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1018 412 211 0 78 chr13 56879060 56879163 -63405149 + PB1D10 SINE Alu 21 115 -2 5 1018 522 46 0 0 chr13 56879444 56879509 -63404803 + (TGG)n Simple_repeat Simple_repeat 1 65 0 5 1018 423 0 0 0 chr13 56880145 56880192 -63404120 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1018 425 76 0 15 chr13 56880212 56880279 -63404033 + (GGGA)n Simple_repeat Simple_repeat 2 67 0 5 1018 449 184 0 0 chr13 56880902 56880978 -63403334 + ID_B1 SINE B4 143 218 -6 5 1018 846 198 119 0 chr13 56884444 56884646 -63399666 + URR1A DNA MER1_type 1 226 0 5 1018 213 243 14 28 chr13 56884851 56884923 -63399389 + CT-rich Low_complexity Low_complexity 3 73 0 5 1019 740 336 29 32 chr13 56885625 56885782 -63398530 - MER33 DNA MER1_type -17 307 152 5 1019 327 253 13 0 chr13 56885782 56885861 -63398451 + ID4_ SINE ID 4 83 0 5 1019 740 336 29 32 chr13 56885861 56886011 -63398301 - MER33 DNA MER1_type -173 151 1 5 1019 439 342 30 20 chr13 56886766 56886966 -63397346 + MIR SINE MIR 28 229 -33 5 1019 260 336 68 17 chr13 56888239 56888357 -63395955 + MLT1A LTR MaLR 1 124 -266 5 1019 299 336 56 56 chr13 56888390 56888551 -63395761 + MLT1A LTR MaLR 189 349 -25 5 1019 204 179 0 0 chr13 56888869 56888908 -63395404 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1019 860 236 6 12 chr13 56889251 56889414 -63394898 - RSINE1 SINE B4 -2 163 2 5 1019 243 258 97 0 chr13 56889728 56889790 -63394522 - ID4 SINE ID -13 70 3 5 1019 306 0 0 0 chr13 56889958 56889992 -63394320 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1019 423 0 0 0 chr13 56889992 56890038 -63394274 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 1019 411 310 6 70 chr13 56890046 56890202 -63394110 - RSINE1 SINE B4 -17 148 3 5 1019 1153 280 0 3 chr13 56890290 56890577 -63393735 - B4A SINE B4 -6 286 1 5 1019 203 250 108 11 chr13 56890577 56890670 -63393642 + L2 LINE L2 161 262 -3157 5 1019 777 188 0 48 chr13 56892431 56892576 -63391736 - B1_Mur1 SINE Alu 0 149 12 5 1019 490 307 80 45 chr13 56894001 56894270 -63390042 - MTEa LTR MaLR 0 379 85 5 1019 565 231 17 25 chr13 56894337 56894457 -63389855 - ID_B1 SINE B4 -28 196 78 5 1019 414 264 0 0 chr13 56894835 56894922 -63389390 - B1F SINE Alu -62 87 1 6 1019 306 305 0 87 chr13 56894922 56894958 -63389354 - ID SINE ID -146 78 53 6 1019 332 313 71 32 chr13 56895226 56895381 -63388931 + MIR SINE MIR 45 205 -57 6 1019 369 0 0 0 chr13 56895844 56895885 -63388427 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1019 219 278 153 0 chr13 56897230 56897253 -63387059 + AmnSINE1 SINE SINE 1 83 -492 6 1019 288 204 0 0 chr13 56897253 56897302 -63387010 + 5S rRNA rRNA 38 86 -35 6 1019 890 259 61 0 chr13 56900583 56900811 -63383501 - B4 SINE B4 -3 289 48 6 1019 190 0 0 62 chr13 56900835 56900867 -63383445 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 6 1019 540 191 6 11 chr13 56901762 56901942 -63382370 + (TG)n Simple_repeat Simple_repeat 1 179 0 6 1019 676 164 17 11 chr13 56901983 56902162 -63382150 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1019 882 101 13 13 chr13 56902490 56902640 -63381672 + (GGA)n Simple_repeat Simple_repeat 3 152 0 6 1019 221 310 99 40 chr13 56903128 56903279 -63381033 - MIR SINE MIR -80 182 23 6 1019 252 0 0 0 chr13 56903589 56903617 -63380695 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1019 2550 189 68 12 chr13 56903847 56904351 -63379961 + RMER5 LTR ERV1 3 534 0 6 1019 24 0 0 0 chr13 56904494 56904518 -63379794 + GC_rich Low_complexity Low_complexity 1 24 0 6 1019 254 290 123 55 chr13 56904771 56904917 -63379395 + LTR16D2 LTR ERVL 226 381 -191 6 1019 1348 234 78 45 chr13 56905174 56905532 -63378780 + ORR1D2 LTR MaLR 1 370 0 6 1019 399 310 0 72 chr13 56905525 56905557 -63378755 + ID SINE ID 58 78 -146 6 1019 542 254 16 24 chr13 56905557 56905682 -63378630 + B1_Mur1 SINE Alu 2 125 -24 6 1019 398 53 18 0 chr13 56906163 56906220 -63378092 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1019 577 243 104 0 chr13 56906255 56906428 -63377884 - B3A SINE B2 -6 192 2 6 1019 324 366 13 97 chr13 56906455 56906682 -63377630 + L2c LINE L2 3022 3229 -158 6 1019 247 206 174 14 chr13 56907521 56907590 -63376722 - MIRc SINE MIR -54 214 135 6 1019 205 209 19 56 chr13 56908799 56908961 -63375351 + C-rich Low_complexity Low_complexity 3 158 0 6 1019 202 196 0 111 chr13 56908972 56909035 -63375277 + C-rich Low_complexity Low_complexity 2 57 0 6 1019 206 317 125 0 chr13 56909251 56909355 -63374957 - MIRm SINE MIR -117 159 43 6 1019 701 157 299 6 chr13 56909385 56909552 -63374760 + B3 SINE B2 1 216 0 6 1019 1970 218 17 21 chr13 56909773 56910255 -63374057 + L1_Mur3 LINE L1 4976 5455 -425 6 1019 793 216 126 47 chr13 56910251 56910528 -63373784 + Lx8 LINE L1 7166 7464 -9 6 1019 529 170 380 42 chr13 56912517 56912683 -63371629 - URR1B DNA MER1_type -1 224 3 6 1019 375 315 58 35 chr13 56914853 56915024 -63369288 - MIR SINE MIR -6 256 82 6 1019 973 55 8 0 chr13 56915424 56915552 -63368760 - URR1B DNA MER1_type -1 224 96 6 1019 2013 89 43 68 chr13 56915556 56915882 -63368430 - ORR1A3 LTR MaLR -8 318 1 6 1019 346 328 88 0 chr13 56916264 56916389 -63367923 + RSINE1 SINE B4 1 136 -29 6 1019 204 67 0 0 chr13 56916433 56916463 -63367849 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 1019 235 286 0 14 chr13 56917214 56917285 -63367027 + ID4_ SINE ID 1 70 -13 6 1019 194 203 53 147 chr13 56917996 56918071 -63366241 + L2c LINE L2 3279 3346 -41 6 1019 242 312 20 50 chr13 56918214 56918315 -63365997 + L2 LINE L2 1597 1694 -1725 6 1019 276 261 116 32 chr13 56919321 56919416 -63364896 - PB1D7 SINE Alu -16 104 2 6 1019 307 299 101 16 chr13 56920364 56920493 -63363819 + MLT1A1 LTR MaLR 269 408 0 6 1019 344 281 33 87 chr13 56920586 56920769 -63363543 + L1MEb LINE L1 723 895 -5175 6 1019 575 166 96 18 chr13 56920862 56920986 -63363326 - B1_Mm SINE Alu -11 138 2 6 1019 282 307 110 6 chr13 56921012 56921176 -63363136 + L1MC5 LINE L1 7734 7914 -47 6 1019 26 30 0 0 chr13 56922090 56922123 -63362189 + AT_rich Low_complexity Low_complexity 1 33 0 6 1019 2059 140 22 25 chr13 56922545 56922905 -63361407 + RLTR15 LTR ERVK 1 359 0 6 1019 483 18 0 0 chr13 56922922 56922978 -63361334 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1019 2000 193 55 5 chr13 56922987 56923368 -63360944 + MTD LTR MaLR 20 419 0 6 1019 240 254 16 16 chr13 56924585 56924649 -63359663 + PB1D10 SINE Alu 47 110 -7 6 1019 490 157 10 10 chr13 56926318 56926421 -63357891 + CT-rich Low_complexity Low_complexity 1 103 0 6 1019 260 238 143 0 chr13 56926472 56926535 -63357777 - B1F1 SINE Alu -65 84 13 6 1019 581 200 0 11 chr13 56926539 56926721 -63357591 + (TG)n Simple_repeat Simple_repeat 1 180 0 6 1019 371 252 110 25 chr13 56927067 56927185 -63357127 + B1F1 SINE Alu 21 148 -1 6 1019 791 267 10 30 chr13 56927185 56927386 -63356926 + B3A SINE B2 2 198 0 6 1019 696 220 148 0 chr13 56928051 56928233 -63356079 - B3 SINE B2 -7 209 1 6 1019 189 314 37 97 chr13 56928288 56928422 -63355890 - L2c LINE L2 -2 3385 3260 6 1019 491 0 0 17 chr13 56930819 56930879 -63353433 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1019 995 143 11 0 chr13 56931028 56931203 -63353109 + GA-rich Low_complexity Low_complexity 4 180 0 6 1019 224 100 25 0 chr13 56932411 56932451 -63351861 + (TCCC)n Simple_repeat Simple_repeat 4 44 0 6 1019 267 223 52 48 chr13 56932451 56932542 -63351770 - ID4 SINE ID -53 99 6 6 1019 203 0 37 0 chr13 56932815 56932842 -63351470 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1019 239 341 26 0 chr13 56933149 56933235 -63351077 + MIR SINE MIR 25 112 -96 6 1019 243 0 0 0 chr13 56935931 56935958 -63348354 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1019 468 0 0 0 chr13 56936194 56936246 -63348066 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1019 1082 55 0 14 chr13 56937674 56937821 -63346491 + (TCTCCC)n Simple_repeat Simple_repeat 2 146 0 6 1019 184 339 180 33 chr13 56937932 56938054 -63346258 + MIR SINE MIR 8 147 -115 6 1019 220 333 92 31 chr13 56938714 56938844 -63345468 - MIRb SINE MIR -14 254 114 6 1019 1661 141 138 38 chr13 56940842 56941182 -63343130 + ORR1D1 LTR MaLR 1 374 0 6 1019 288 337 52 82 chr13 56941954 56942148 -63342164 - MLT1A1 LTR MaLR -216 192 5 6 1019 199 341 48 88 chr13 56942162 56942346 -63341966 - MIRc SINE MIR -77 185 3 6 1019 273 29 0 0 chr13 56942445 56942479 -63341833 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1019 216 163 20 20 chr13 56944291 56944341 -63339971 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 6 1019 211 280 0 0 chr13 56944387 56944437 -63339875 - ID4_ SINE ID -33 50 1 6 1019 805 88 0 81 chr13 56944860 56945021 -63339291 - L1_Mus1 LINE L1 0 6567 6439 6 1019 963 164 196 0 chr13 56945614 56945803 -63338509 - URR1A DNA MER1_type 0 226 1 6 1019 1587 37 0 16 chr13 56946878 56947036 -63337276 + B2_Mm1a SINE B2 3 160 -33 6 1019 324 0 0 0 chr13 56947036 56947072 -63337240 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 6 1019 1587 37 0 16 chr13 56947072 56947107 -63337205 + B2_Mm1a SINE B2 161 193 0 6 1019 984 80 24 6 chr13 56947955 56948119 -63336193 + (TCTA)n Simple_repeat Simple_repeat 2 168 0 6 1019 846 261 11 11 chr13 56948123 56948309 -63336003 - B3 SINE B2 -29 187 2 6 1019 197 200 0 0 chr13 56948444 56948479 -63335833 + L2b LINE L2 3334 3368 -7 6 1019 365 305 65 78 chr13 56948693 56948924 -63335388 + MLT1H1 LTR MaLR 82 309 -246 6 1019 292 283 86 11 chr13 56948893 56948986 -63335326 + MLT1H1 LTR MaLR 423 522 -33 6 1019 182 268 115 90 chr13 56949925 56950003 -63334309 - L2b LINE L2 -183 3192 3113 6 1019 685 176 198 40 chr13 56950888 56951065 -63333247 + B3 SINE B2 1 205 -11 6 1019 1211 249 86 9 chr13 56951462 56951786 -63332526 - MTD LTR MaLR -14 405 57 6 1019 316 207 106 32 chr13 56951873 56951989 -63332323 - B3A SINE B2 -93 123 1 6 1019 338 139 0 14 chr13 56952697 56952770 -63331542 + CT-rich Low_complexity Low_complexity 1 72 0 6 1019 441 0 0 0 chr13 56952770 56952819 -63331493 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1019 212 131 21 21 chr13 56953166 56953213 -63331099 + (TTTG)n Simple_repeat Simple_repeat 3 49 0 6 1019 187 167 0 0 chr13 56954042 56954072 -63330240 - MER5B DNA MER1_type -36 142 113 6 1019 212 373 29 29 chr13 56954572 56954677 -63329635 - MIRc SINE MIR -112 156 52 6 1019 316 271 56 24 chr13 56955280 56955405 -63328907 - L1MD LINE L1 -2945 3201 3073 6 1019 189 0 0 0 chr13 56955405 56955426 -63328886 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 6 1019 1025 272 100 34 chr13 56955912 56956266 -63328046 + MTE2b LTR MaLR 1 369 -1 6 1019 2876 258 174 83 chr13 56956267 56957598 -63326714 + MTE2b-int LTR MaLR 1 1453 -127 6 1019 552 30 0 0 chr13 56958136 56958202 -63326110 + (GGA)n Simple_repeat Simple_repeat 1 66 0 6 1019 208 313 48 39 chr13 56958754 56958857 -63325455 - MIRb SINE MIR -60 208 105 6 1019 671 168 95 44 chr13 56958986 56959123 -63325189 - B1_Mur2 SINE Alu -5 144 1 6 1019 615 159 20 12 chr13 56959982 56960385 -63323927 + (TCTA)n Simple_repeat Simple_repeat 1 406 0 6 1019 434 268 0 0 chr13 56960717 56960814 -63323498 - Tigger12A DNA MER2_type 0 791 695 6 1019 204 333 29 0 chr13 56962646 56962715 -63321597 + MER5A DNA MER1_type 71 141 -48 6 1019 326 294 165 36 chr13 56964217 56964520 -63319792 + L2 LINE L2 1583 1924 -1495 6 1019 486 290 63 28 chr13 56964648 56964900 -63319412 - L1ME1 LINE L1 -325 5854 5594 6 1019 28 29 0 0 chr13 56965017 56965052 -63319260 + AT_rich Low_complexity Low_complexity 1 35 0 6 1019 830 222 85 115 chr13 56965945 56966311 -63318001 + ORR1E LTR MaLR 1 355 -4 6 1019 940 141 17 17 chr13 56966311 56966665 -63317647 + CT-rich Low_complexity Low_complexity 1 354 0 6 1019 674 175 8 29 chr13 56966688 56966937 -63317375 + CT-rich Low_complexity Low_complexity 1 243 0 6 1019 1112 112 0 11 chr13 56966937 56967118 -63317194 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 7 1019 396 0 0 0 chr13 56967298 56967342 -63316970 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 7 1019 286 325 137 14 chr13 56967367 56967579 -63316733 - L2 LINE L2 -1796 1623 1386 7 1019 704 339 146 22 chr13 56967717 56968435 -63315877 - L2 LINE L2 -2068 1351 545 7 1019 247 365 10 0 chr13 56969556 56969652 -63314660 - L2c LINE L2 -15 3372 3276 7 1019 243 173 0 0 chr13 56970126 56970178 -63314134 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1019 398 326 44 0 chr13 56970777 56970912 -63313400 - MIR SINE MIR -12 250 110 7 1019 748 324 66 15 chr13 56972474 56972941 -63311371 - L2c LINE L2 -389 3030 2540 7 1019 658 178 12 6 chr13 56975372 56975503 -63308809 + B3 SINE B2 1 130 -68 7 1019 410 128 21 21 chr13 56975535 56975631 -63308681 + GA-rich Low_complexity Low_complexity 1 96 0 7 1019 333 0 0 0 chr13 56975721 56975758 -63308554 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1019 198 150 0 0 chr13 56976008 56976048 -63308264 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1019 297 0 0 0 chr13 56976074 56976107 -63308205 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1019 180 135 0 0 chr13 56976140 56976177 -63308135 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1019 288 0 0 0 chr13 56976201 56976233 -63308079 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1019 180 125 0 0 chr13 56976261 56976293 -63308019 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1019 377 210 11 43 chr13 56976319 56976503 -63307809 + (CA)n Simple_repeat Simple_repeat 2 179 0 7 1019 198 118 0 0 chr13 56976577 56976611 -63307701 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1019 209 302 19 0 chr13 56976800 56976853 -63307459 + L2b LINE L2 3291 3344 -31 7 1019 245 297 16 0 chr13 56977846 56977910 -63306402 + GA-rich Low_complexity Low_complexity 5 69 0 7 1019 510 271 14 7 chr13 56979472 56979613 -63304699 + HAL1-2a_MD LINE L1 2344 2485 -539 7 1019 717 12 0 0 chr13 56980649 56980731 -63303581 + (TTTTC)n Simple_repeat Simple_repeat 1 82 0 7 1019 250 206 27 0 chr13 56981618 56981691 -63302621 + (CA)n Simple_repeat Simple_repeat 1 75 0 7 1019 500 68 68 0 chr13 56982224 56982327 -63301985 + (TG)n Simple_repeat Simple_repeat 2 111 0 7 1019 27 0 0 0 chr13 56983717 56983744 -63300568 + AT_rich Low_complexity Low_complexity 1 27 0 7 1019 405 86 0 0 chr13 56984753 56984811 -63299501 + (CA)n Simple_repeat Simple_repeat 2 59 0 7 1019 1573 233 65 27 chr13 56984894 56985295 -63299017 + MTD LTR MaLR 4 419 0 7 1019 226 322 86 20 chr13 56987672 56987814 -63296498 + MIRb SINE MIR 114 262 0 7 1019 393 277 0 0 chr13 56988164 56988247 -63296065 + PB1D10 SINE Alu 30 112 -5 7 1019 209 97 47 31 chr13 56989621 56989685 -63294627 + (TTTG)n Simple_repeat Simple_repeat 2 66 0 7 1019 233 29 29 0 chr13 56989913 56989947 -63294365 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1019 181 204 17 85 chr13 56990416 56990475 -63293837 - L2b LINE L2 -11 3364 3310 7 1019 189 0 0 0 chr13 56990657 56990678 -63293634 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 7 1019 394 306 7 45 chr13 56990724 56990878 -63293434 - RSINE1 SINE B4 -14 151 4 7 1019 197 329 106 14 chr13 56990924 56991066 -63293246 + MIR3 SINE MIR 47 201 -7 7 1019 184 307 113 47 chr13 56993925 56994031 -63290281 - L2a LINE L2 -10 3416 3304 7 1019 195 269 55 70 chr13 56994435 56994563 -63289749 + L2a LINE L2 3250 3375 -51 7 1019 300 111 0 0 chr13 56995344 56995389 -63288923 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1019 272 49 49 0 chr13 56996382 56996423 -63287889 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 7 1019 189 221 57 148 chr13 56996536 56996658 -63287654 - L3 LINE CR1 -2310 2179 2069 7 1019 324 111 0 0 chr13 56997319 56997373 -63286939 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1019 267 320 41 48 chr13 56998424 56998556 -63285756 - MIR SINE MIR -29 239 117 7 1019 304 250 112 45 chr13 56998961 56999095 -63285217 - L1MCa LINE L1 -4491 2017 1875 7 1019 304 285 99 73 chr13 56999705 56999891 -63284421 - MIR SINE MIR -34 228 47 7 1019 3044 52 67 0 chr13 57001450 57001895 -63282417 + RLTR44D LTR ERVK 1 475 -11 1 1019 180 0 0 0 chr13 57003051 57003071 -63281241 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1019 249 83 0 0 chr13 57003164 57003200 -63281112 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 3 1019 520 302 15 55 chr13 57003219 57003419 -63280893 - B3A SINE B2 -6 192 1 4 1019 803 339 43 7 chr13 57003848 57004285 -63280027 + L1MC1 LINE L1 5862 6314 -19 5 1019 249 108 0 0 chr13 57004301 57004338 -63279974 + (CTTG)n Simple_repeat Simple_repeat 3 39 0 6 1019 231 36 0 0 chr13 57004372 57004400 -63279912 + (ATGGTG)n Simple_repeat Simple_repeat 5 32 0 7 1019 427 310 17 50 chr13 57004543 57004723 -63279589 + HERV16-int LTR ERVL 1876 2049 -2947 8 1019 24 32 0 0 chr13 57006582 57006613 -63277699 + AT_rich Low_complexity Low_complexity 1 31 0 9 1019 378 262 37 0 chr13 57006797 57006904 -63277408 + PB1D10 SINE Alu 2 112 -5 1 1019 1013 66 0 0 chr13 57006951 57007087 -63277225 + B1_Mus1 SINE Alu 12 147 -1 1 1019 209 24 68 68 chr13 57007092 57007136 -63277176 + A-rich Low_complexity Low_complexity 3 46 0 1 1019 584 38 13 0 chr13 57007137 57007216 -63277096 + (GA)n Simple_repeat Simple_repeat 1 80 0 1 1019 221 212 0 29 chr13 57007223 57007291 -63277021 + GA-rich Low_complexity Low_complexity 3 68 0 1 1019 304 287 93 25 chr13 57007968 57008086 -63276226 + LTR33A LTR ERVL 352 477 -43 1 1019 1837 167 113 8 chr13 57008601 57009000 -63275312 - BGLII_B LTR ERVK 0 441 1 1 1019 2207 149 76 25 chr13 57009001 57009448 -63274864 - MYSERV16_I-int LTR ERVK 0 2326 1857 1 1019 376 361 95 16 chr13 57009450 57009703 -63274609 + L1MC LINE L1 5445 5717 -2165 1 1019 21 0 0 0 chr13 57010068 57010089 -63274223 + AT_rich Low_complexity Low_complexity 1 21 0 1 1019 803 230 163 0 chr13 57010095 57010273 -63274039 - B3 SINE B2 -9 207 1 1 1019 278 167 50 0 chr13 57010620 57010680 -63273632 - ID_B1 SINE B4 -6 218 156 2 1019 1114 206 5 18 chr13 57011529 57011751 -63272561 + URR1B DNA MER1_type 7 225 0 2 1019 21 0 0 0 chr13 57012466 57012487 -63271825 + AT_rich Low_complexity Low_complexity 1 21 0 2 1019 502 305 0 0 chr13 57012498 57012652 -63271660 - RSINE1 SINE B4 -7 158 5 2 1019 681 13 0 0 chr13 57012993 57013071 -63271241 + (GGA)n Simple_repeat Simple_repeat 3 80 0 2 1019 502 241 158 6 chr13 57014156 57014327 -63269985 - MER67C LTR ERV1 -309 402 206 2 1019 1972 73 56 62 chr13 57014523 57014844 -63269468 - ORR1A2 LTR MaLR -8 319 1 2 1019 246 81 0 0 chr13 57015598 57015635 -63268677 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 1019 600 204 95 137 chr13 57015642 57015926 -63268386 - MTD LTR MaLR -31 388 117 2 1019 252 270 46 83 chr13 57016157 57016266 -63268046 + LTR16A LTR ERVL 178 282 -169 2 1020 375 235 72 26 chr13 57016394 57016547 -63267765 + L1MA10 LINE L1 6175 6334 0 3 1020 915 149 7 0 chr13 57017484 57017638 -63266674 - URR1A DNA MER1_type 0 226 72 3 1020 513 0 0 0 chr13 57017724 57017781 -63266531 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 1020 384 328 97 26 chr13 57018419 57018729 -63265583 - L1M5 LINE L1 -3316 2830 2499 3 1020 22 0 0 0 chr13 57018924 57018946 -63265366 + AT_rich Low_complexity Low_complexity 1 22 0 3 1020 643 253 19 0 chr13 57018958 57019112 -63265200 + B3A SINE B2 1 157 -41 3 1020 387 0 0 0 chr13 57019114 57019157 -63265155 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1020 333 0 0 0 chr13 57019157 57019193 -63265119 + (GA)n Simple_repeat Simple_repeat 2 38 0 3 1020 356 317 47 58 chr13 57019527 57019718 -63264594 + L1M5 LINE L1 5612 5800 -440 3 1020 230 281 0 15 chr13 57020421 57020486 -63263826 + CT-rich Low_complexity Low_complexity 3 66 0 3 1020 1399 67 39 0 chr13 57020524 57020704 -63263608 - B2_Mm2 SINE B2 -4 191 5 4 1020 315 317 53 30 chr13 57021238 57021407 -63262905 + L1MEg LINE L1 1490 1662 -4580 4 1020 1980 150 34 80 chr13 57021496 57021909 -63262403 - RMER10B LTR ERVL 0 398 5 4 1020 469 312 61 47 chr13 57022384 57022680 -63261632 + L1MEg LINE L1 3482 3781 -2365 4 1020 420 342 21 36 chr13 57022746 57022896 -63261416 + B3A SINE B2 3 154 -44 4 1020 243 0 0 0 chr13 57022896 57022923 -63261389 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1020 420 342 21 36 chr13 57022923 57022966 -63261346 + B3A SINE B2 155 193 -5 4 1020 251 262 100 27 chr13 57023219 57023329 -63260983 + L1MEg LINE L1 4130 4247 -1899 4 1020 342 0 0 0 chr13 57023447 57023485 -63260827 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1020 564 15 0 0 chr13 57023485 57023549 -63260763 + (GA)n Simple_repeat Simple_repeat 1 65 0 4 1020 204 296 125 42 chr13 57023714 57023834 -63260478 - MIRb SINE MIR -121 147 18 4 1020 241 159 16 16 chr13 57023879 57023943 -63260369 + GA-rich Low_complexity Low_complexity 4 67 0 4 1020 279 277 32 0 chr13 57025343 57025437 -63258875 + MTEa LTR MaLR 279 375 -4 4 1020 509 289 13 13 chr13 57025579 57025737 -63258575 - B3A SINE B2 -3 195 38 5 1020 7021 223 91 31 chr13 57025741 57025993 -63258319 - Lx6 LINE L1 -70 7390 7131 5 1020 333 0 0 0 chr13 57025993 57026030 -63258282 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 5 1020 18985 194 83 30 chr13 57026030 57027829 -63256483 - Lx6 LINE L1 -330 7130 5230 5 1020 534 54 0 0 chr13 57027829 57027903 -63256409 + (TG)n Simple_repeat Simple_repeat 2 75 0 5 1020 18985 144 70 29 chr13 57027903 57028389 -63255923 - Lx6 LINE L1 -651 5229 4728 5 1020 189 0 0 0 chr13 57028389 57028410 -63255902 + (TTA)n Simple_repeat Simple_repeat 1 21 0 5 1020 18985 144 70 29 chr13 57028410 57030857 -63253455 - Lx6 LINE L1 -1153 4727 2148 5 1020 3891 215 92 34 chr13 57030882 57031847 -63252465 - RMER1B Other Other -2 1064 44 5 1020 405 0 0 0 chr13 57032324 57032369 -63251943 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 1020 207 0 0 0 chr13 57032369 57032391 -63251921 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1020 3774 164 53 96 chr13 57032391 57032473 -63251839 - Lx6 LINE L1 -3728 2152 2070 5 1020 237 65 0 0 chr13 57032473 57032504 -63251808 + (TGG)n Simple_repeat Simple_repeat 1 31 0 5 1020 3774 164 53 96 chr13 57032504 57033013 -63251299 - Lx6 LINE L1 -3811 2069 1523 5 1020 216 67 0 0 chr13 57033013 57033043 -63251269 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 1020 3774 196 47 77 chr13 57033043 57034221 -63250091 - Lx6 LINE L1 -4358 1522 423 5 1020 250 182 0 0 chr13 57034226 57034270 -63250042 - B3A SINE B2 -154 44 1 5 1020 207 0 0 0 chr13 57035075 57035098 -63249214 + (TG)n Simple_repeat Simple_repeat 1 23 0 6 1020 923 213 96 0 chr13 57035947 57036144 -63248168 - B3 SINE B2 0 216 1 6 1020 285 276 73 102 chr13 57036890 57037027 -63247285 + B4A SINE B4 154 286 -6 6 1020 484 299 17 0 chr13 57037050 57037224 -63247088 + (CA)n Simple_repeat Simple_repeat 2 178 0 6 1020 654 175 0 8 chr13 57037334 57037455 -63246857 + PB1D9 SINE Alu 1 120 0 6 1020 21 0 0 0 chr13 57037848 57037869 -63246443 + AT_rich Low_complexity Low_complexity 1 21 0 6 1020 182 37 37 0 chr13 57038072 57038099 -63246213 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 6 1020 369 0 0 0 chr13 57038624 57038665 -63245647 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1020 243 244 26 0 chr13 57039340 57039418 -63244894 + ID4_ SINE ID 1 80 -3 6 1020 270 0 0 0 chr13 57040262 57040292 -63244020 + (CAA)n Simple_repeat Simple_repeat 3 32 0 6 1020 1146 62 0 7 chr13 57042606 57042751 -63241561 - B1_Mm SINE Alu 0 147 4 7 1020 180 239 29 43 chr13 57043455 57043525 -63240787 - MIR SINE MIR -124 138 70 7 1020 621 243 61 61 chr13 57044317 57044514 -63239798 - B3A SINE B2 0 198 2 7 1020 7541 86 55 22 chr13 57045106 57046278 -63238034 + L1_Mur2 LINE L1 2039 3248 -2629 7 1020 411 83 0 0 chr13 57046839 57046899 -63237413 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 1020 321 275 45 9 chr13 57046901 57047011 -63237301 - B4 SINE B4 -34 258 145 7 1020 221 185 0 36 chr13 57047065 57047121 -63237191 + T-rich Low_complexity Low_complexity 4 57 0 7 1020 316 275 36 9 chr13 57047122 57047232 -63237080 - PB1D10 SINE Alu -1 116 4 7 1020 477 0 0 0 chr13 57047432 57047485 -63236827 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 1020 507 33 0 0 chr13 57047485 57047545 -63236767 + (TG)n Simple_repeat Simple_repeat 2 62 0 7 1020 228 67 0 0 chr13 57048573 57048603 -63235709 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 8 1020 222 105 0 0 chr13 57049215 57049253 -63235059 + (A)n Simple_repeat Simple_repeat 1 38 0 8 1020 365 314 72 63 chr13 57050013 57050220 -63234092 - MLT1F2 LTR MaLR -56 504 296 8 1020 8132 49 4 1 chr13 57050621 57051596 -63232716 - RLTR13A3 LTR ERVK 0 978 1 8 1020 255 362 26 0 chr13 57053770 57053886 -63230426 + LTR88b LTR Gypsy? 31 149 -688 8 1020 234 0 0 0 chr13 57054443 57054469 -63229843 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 8 1020 263 104 0 20 chr13 57055270 57055319 -63228993 - B1_Mus2 SINE Alu 0 147 100 8 1020 1277 170 23 5 chr13 57056510 57056729 -63227583 - URR1B DNA MER1_type 0 225 3 8 1020 1563 128 51 81 chr13 57057280 57057612 -63226700 - RLTRETN_Mm LTR ERVK 0 322 1 8 1020 609 238 32 104 chr13 57058253 57058502 -63225810 - ORR1D2 LTR MaLR -135 235 5 8 1020 204 242 108 21 chr13 57058794 57058887 -63225425 - MIRb SINE MIR -121 147 47 9 1020 924 218 27 18 chr13 57059373 57059593 -63224719 - B4 SINE B4 -65 227 6 9 1020 276 286 24 0 chr13 57059625 57059709 -63224603 - L1MD2 LINE L1 -34 6325 6240 9 1020 343 263 34 23 chr13 57059944 57060171 -63224141 + CT-rich Low_complexity Low_complexity 1 229 0 9 1020 230 282 39 0 chr13 57060426 57060504 -63223808 - MIR SINE MIR -34 228 148 9 1020 767 307 55 0 chr13 57060550 57060807 -63223505 - B4A SINE B4 -14 278 8 9 1020 669 231 58 0 chr13 57061708 57061881 -63222431 - RMER15 LTR ERVL -4 571 389 9 1020 492 225 64 64 chr13 57061930 57062101 -63222211 - RMER15 LTR ERVL -378 197 27 9 1020 343 212 79 20 chr13 57065327 57065428 -63218884 - L1ME2 LINE L1 -14 6150 6044 9 1020 1018 242 14 0 chr13 57065472 57065683 -63218629 - B3 SINE B2 0 216 3 9 1020 600 219 183 50 chr13 57065985 57066225 -63218087 + RLTR10A LTR ERVK 140 411 0 9 1020 414 191 54 54 chr13 57066241 57066352 -63217960 + RLTR10-int LTR ERVK 318 428 -1559 9 1020 463 345 33 23 chr13 57066531 57066837 -63217475 + IAP-d-int LTR ERVK 203 511 -6031 1 1020 6775 308 57 48 chr13 57067132 57071600 -63212712 + IAP-d-int LTR ERVK 702 5207 -1335 1 1020 1819 223 16 28 chr13 57071745 57072251 -63212061 + IAP-d-int LTR ERVK 6529 7042 -202 1 1020 560 241 183 50 chr13 57072309 57072549 -63211763 + RLTR10A LTR ERVK 140 411 0 1 1020 235 295 60 30 chr13 57072577 57072710 -63211602 - L1ME2 LINE L1 -388 5776 5640 9 1020 927 275 10 79 chr13 57072723 57073015 -63211297 - B4A SINE B4 -20 272 1 1 1020 545 328 82 49 chr13 57073619 57074109 -63210203 - L1MC3 LINE L1 -732 7150 6645 1 1020 711 306 118 39 chr13 57074799 57075367 -63208945 - L1MC3 LINE L1 -1192 6593 5981 1 1020 368 295 130 18 chr13 57075756 57076019 -63208293 - L1MC3 LINE L1 -340 6004 5703 1 1020 242 306 35 0 chr13 57076020 57076105 -63208207 - ORR1E LTR MaLR 0 359 272 1 1020 232 224 38 38 chr13 57076226 57076305 -63208007 - ORR1E LTR MaLR -308 86 8 1 1020 303 286 51 31 chr13 57076308 57076503 -63207809 - L1MC3 LINE L1 -2076 5709 5511 1 1020 22 0 0 0 chr13 57076516 57076538 -63207774 + AT_rich Low_complexity Low_complexity 1 22 0 1 1020 407 216 127 1 chr13 57076575 57076707 -63207605 - L1MA9 LINE L1 -5 6307 6156 1 1020 535 225 230 6 chr13 57076725 57076886 -63207426 + B3 SINE B2 3 199 -17 1 1020 1325 111 14 0 chr13 57076889 57077097 -63207215 + MTC LTR MaLR 1 211 -210 1 1020 3879 154 116 70 chr13 57077099 57077959 -63206353 + RMER19B LTR ERVK 3 902 0 1 1020 1198 95 90 0 chr13 57077959 57078158 -63206154 + MTC LTR MaLR 191 407 0 1 1020 325 255 139 32 chr13 57078400 57078708 -63205604 - L1MC3 LINE L1 -878 5466 5119 1 1020 698 232 6 50 chr13 57078799 57078958 -63205354 - RSINE1 SINE B4 -11 154 3 1 1020 39823 33 2 6 chr13 57079028 57085226 -63199086 - L1Md_T LINE L1 0 6582 418 1 1020 536 238 77 5 chr13 57085259 57085453 -63198859 - L1MC3 LINE L1 -1181 4965 4758 1 1020 274 318 38 70 chr13 57086819 57087005 -63197307 + RMER15 LTR ERVL 356 535 -40 1 1020 230 325 144 28 chr13 57087708 57088034 -63196278 - L1MEf LINE L1 -3378 2941 2578 1 1020 252 0 0 0 chr13 57088177 57088205 -63196107 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1020 318 262 111 35 chr13 57088306 57088504 -63195808 - L1MEf LINE L1 -4112 2303 2091 1 1020 234 267 72 51 chr13 57088922 57089060 -63195252 - L1MEf LINE L1 -4351 2049 1909 1 1020 306 0 0 0 chr13 57089131 57089165 -63195147 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1020 570 237 0 25 chr13 57089177 57089298 -63195014 - B3A SINE B2 -80 118 1 1 1020 456 230 12 26 chr13 57089462 57089593 -63194719 - B1F SINE Alu -1 148 20 1 1020 429 146 42 0 chr13 57089681 57089777 -63194535 + Lx6 LINE L1 7359 7458 -2 1 1020 776 309 72 17 chr13 57090299 57090592 -63193720 + ORR1D2 LTR MaLR 1 309 -61 1 1020 261 0 0 0 chr13 57090612 57090641 -63193671 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1020 226 250 67 0 chr13 57090645 57090705 -63193607 - L1MEf LINE L1 -4790 1625 1562 1 1020 25 0 0 0 chr13 57090705 57090730 -63193582 + AT_rich Low_complexity Low_complexity 1 25 0 1 1020 2464 163 31 177 chr13 57091740 57092456 -63191856 + RMER19C LTR ERVK 1 611 0 1 1020 207 0 0 0 chr13 57093254 57093277 -63191035 + (CA)n Simple_repeat Simple_repeat 1 23 0 1 1020 352 205 213 0 chr13 57093495 57093620 -63190692 + B3 SINE B2 1 164 -52 1 1020 360 64 0 0 chr13 57096169 57096216 -63188096 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 1 1020 297 0 0 0 chr13 57096443 57096476 -63187836 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1020 326 244 42 42 chr13 57096769 57096889 -63187423 - L2a LINE L2 -1 3425 3306 1 1020 521 315 72 49 chr13 57097314 57097621 -63186691 + MLT1A0 LTR MaLR 38 351 -14 1 1020 793 303 99 35 chr13 57098362 57098756 -63185556 - Lx8 LINE L1 0 7473 7055 1 1020 454 314 93 0 chr13 57098783 57098977 -63185335 + Lx8 LINE L1 6732 6943 -530 1 1020 198 0 0 0 chr13 57099105 57099127 -63185185 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1 1020 279 79 0 0 chr13 57099707 57099745 -63184567 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1020 659 255 12 18 chr13 57099758 57099926 -63184386 - B3A SINE B2 -30 168 2 1 1020 32 0 0 0 chr13 57100519 57100551 -63183761 + AT_rich Low_complexity Low_complexity 1 32 0 1 1020 847 141 0 36 chr13 57101517 57101657 -63182655 + B1_Mur4 SINE Alu 3 137 -13 1 1020 1256 314 17 31 chr13 57102038 57102558 -63181754 - Lx9 LINE L1 -226 7418 6906 1 1020 25 0 0 0 chr13 57103481 57103506 -63180806 + AT_rich Low_complexity Low_complexity 1 25 0 1 1020 213 108 0 0 chr13 57103506 57103543 -63180769 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1020 624 196 0 196 chr13 57103556 57103740 -63180572 - B1_Mur2 SINE Alu 0 149 2 1 1020 228 267 29 181 chr13 57103646 57103751 -63180561 - MT2B LTR ERVL -361 240 152 1 1020 2723 121 18 28 chr13 57103800 57104258 -63180054 - RLTR11B LTR ERVK 0 453 1 1 1020 206 238 172 35 chr13 57106173 57106260 -63178052 - MIR SINE MIR -85 177 79 1 1020 778 91 24 24 chr13 57106281 57106450 -63177862 + (CA)n Simple_repeat Simple_repeat 1 169 0 1 1020 441 0 0 0 chr13 57107777 57107826 -63176486 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1020 337 268 26 26 chr13 57108410 57108525 -63175787 - RLTR23 LTR ERV1 -1 429 315 1 1020 1612 132 26 30 chr13 57108536 57108802 -63175510 + L1VL1 LINE L1 2 266 -6156 1 1020 2872 121 90 0 chr13 57108802 57109248 -63175064 + L1Md_F2 LINE L1 480 965 -5651 1 1020 24520 56 11 1 chr13 57109556 57112718 -63171594 + L1Md_F2 LINE L1 2402 5586 -297 1 1020 7869 55 16 3 chr13 57112719 57113689 -63170623 + L1Md_F2 LINE L1 5588 6570 -12 1 1020 540 307 43 1 chr13 57114165 57114380 -63169932 - L1M2 LINE L1 -2339 5656 5428 1 1020 3596 153 65 20 chr13 57114487 57115132 -63169180 - Lx5 LINE L1 -2 7048 6375 1 1020 258 328 16 8 chr13 57115132 57115258 -63169054 - L1MA6 LINE L1 -10 6290 6164 1 1020 362 230 212 36 chr13 57115569 57115700 -63168612 - B1F SINE Alu 0 149 1 1 1020 185 354 15 0 chr13 57115733 57115798 -63168514 + L2b LINE L2 2996 3061 -314 1 1020 21 89 0 0 chr13 57116071 57116127 -63168185 + AT_rich Low_complexity Low_complexity 1 56 0 1 1020 257 51 0 25 chr13 57116527 57116567 -63167745 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1020 26 74 0 0 chr13 57118644 57118698 -63165614 + AT_rich Low_complexity Low_complexity 1 54 0 1 1020 412 196 19 0 chr13 57119568 57119619 -63164693 + polypyrimidine Low_complexity Low_complexity 59 110 0 1 1020 964 89 0 43 chr13 57119619 57119807 -63164505 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1020 412 196 19 0 chr13 57119807 57119862 -63164450 + polypyrimidine Low_complexity Low_complexity 3 58 0 1 1020 3314 35 5 12 chr13 57120669 57121068 -63163244 - MTA_Mm LTR MaLR 0 396 1 1 1020 714 164 31 8 chr13 57121104 57121233 -63163079 - B1_Mur4 SINE Alu -10 140 9 1 1020 270 237 35 23 chr13 57121435 57121608 -63162704 + (TTATA)n Simple_repeat Simple_repeat 2 176 0 1 1020 218 250 96 36 chr13 57122117 57122200 -63162112 - L3 LINE CR1 -3519 970 883 1 1020 528 183 10 19 chr13 57123289 57123401 -63160911 - B1_Mur1 SINE Alu -2 147 7 1 1020 247 242 257 20 chr13 57123315 57123416 -63160896 - MT2B2 LTR ERVL -306 278 154 1 1020 419 273 96 25 chr13 57125260 57125459 -63158853 - MLT2B4 LTR ERVL -130 426 214 1 1020 457 294 12 30 chr13 57125864 57126032 -63158280 + (TG)n Simple_repeat Simple_repeat 1 165 0 1 1020 405 240 88 52 chr13 57126234 57126302 -63158010 + MLT1A1 LTR MaLR 268 344 -64 1 1020 216 0 0 0 chr13 57126302 57126326 -63157986 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1020 405 240 88 52 chr13 57126326 57126393 -63157919 + MLT1A1 LTR MaLR 345 408 0 1 1020 237 321 75 11 chr13 57126396 57126489 -63157823 - L2b LINE L2 -28 3398 3249 1 1020 603 278 50 60 chr13 57126747 57126920 -63157392 + B3A SINE B2 2 174 -24 1 1020 1837 194 50 200 chr13 57126920 57127596 -63156716 - RMER15 LTR ERVL 0 575 1 1 1020 603 278 50 60 chr13 57127596 57127621 -63156691 + B3A SINE B2 175 198 0 1 1020 1115 213 150 57 chr13 57128039 57128392 -63155920 - MTD LTR MaLR -16 403 18 1 1020 184 316 152 35 chr13 57128678 57128875 -63155437 + L2b LINE L2 2923 3142 -233 1 1020 393 149 0 0 chr13 57129366 57129433 -63154879 + (TTAG)n Simple_repeat Simple_repeat 2 68 0 1 1020 366 298 60 26 chr13 57130462 57130696 -63153616 + L1MB7 LINE L1 4883 5124 -1022 1 1020 488 310 31 30 chr13 57130701 57130947 -63153365 + L1MB7 LINE L1 5918 6157 -21 1 1020 289 274 29 17 chr13 57131153 57131272 -63153040 - L1M5 LINE L1 -333 5791 5660 1 1020 268 299 0 22 chr13 57131650 57131739 -63152573 + C-rich Low_complexity Low_complexity 2 88 0 1 1020 237 309 109 39 chr13 57131760 57131888 -63152424 + MLT1A1 LTR MaLR 271 407 -1 1 1020 438 344 127 0 chr13 57132276 57132433 -63151879 + ID_B1 SINE B4 46 222 -2 1 1020 265 323 21 124 chr13 57132311 57132456 -63151856 + B1_Mus2 SINE Alu 1 130 -17 1 1020 282 261 44 22 chr13 57132707 57132797 -63151515 - BC1_Mm scRNA scRNA -59 93 2 1 1020 2767 109 12 2 chr13 57133156 57133560 -63150752 - MTC LTR MaLR 0 421 14 1 1020 220 186 0 0 chr13 57133639 57133682 -63150630 + G-rich Low_complexity Low_complexity 1 43 0 1 1020 985 274 29 26 chr13 57134193 57134504 -63149808 - Lx8 LINE L1 -538 6935 6624 1 1020 395 280 65 50 chr13 57134530 57134669 -63149643 + Lx8 LINE L1 7109 7249 -224 1 1020 909 152 0 14 chr13 57134812 57134952 -63149360 - B1_Mus2 SINE Alu -9 138 1 1 1020 7052 68 50 8 chr13 57135013 57135867 -63148445 + L1_Mus2 LINE L1 5496 6397 -169 1 1020 3545 20 2 0 chr13 57135867 57136262 -63148050 - MTA_Mm LTR MaLR 0 396 1 1 1020 7052 65 53 8 chr13 57136262 57136436 -63147876 + L1_Mus2 LINE L1 6398 6566 0 1 1020 231 298 86 42 chr13 57136502 57136695 -63147617 + MTE2a LTR MaLR 2 143 -236 1 1020 912 209 39 0 chr13 57136724 57136906 -63147406 + MTD LTR MaLR 36 224 -195 1 1020 183 235 0 0 chr13 57137002 57137053 -63147259 + (CAT)n Simple_repeat Simple_repeat 1 51 0 1 1020 283 264 71 129 chr13 57137084 57137106 -63147206 + MTD LTR MaLR 195 215 -144 1 1020 584 281 19 13 chr13 57137106 57137261 -63147051 - RSINE1 SINE B4 -8 157 2 1 1020 301 237 88 73 chr13 57137261 57137408 -63146904 + MTD LTR MaLR 216 366 -13 1 1020 377 264 0 0 chr13 57137482 57137554 -63146758 + ID4_ SINE ID 12 83 0 1 1020 24 77 0 0 chr13 57137559 57137611 -63146701 + AT_rich Low_complexity Low_complexity 1 52 0 1 1020 521 300 119 52 chr13 57137611 57138030 -63146282 + L1MEf LINE L1 1588 2034 -4166 1 1020 335 323 45 8 chr13 57138100 57138234 -63146078 + ORR1E LTR MaLR 1 139 -220 1 1020 328 272 12 12 chr13 57138310 57138392 -63145920 + B3A SINE B2 80 161 -37 1 1020 763 158 6 17 chr13 57138393 57138573 -63145739 + GA-rich Low_complexity Low_complexity 2 179 0 1 1020 1143 219 43 40 chr13 57139254 57139530 -63144782 - ORR1D1 LTR MaLR -97 277 1 1 1020 226 165 39 10 chr13 57140386 57140490 -63143822 + (TG)n Simple_repeat Simple_repeat 1 107 0 1 1020 242 207 34 6 chr13 57140530 57140705 -63143607 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1020 208 193 46 0 chr13 57140803 57140912 -63143400 + (TG)n Simple_repeat Simple_repeat 1 114 0 2 1020 201 192 40 8 chr13 57140945 57141071 -63143241 + (TG)n Simple_repeat Simple_repeat 1 130 0 2 1020 280 222 33 8 chr13 57141099 57141469 -63142843 + (TG)n Simple_repeat Simple_repeat 1 379 0 2 1020 275 280 90 15 chr13 57142413 57142547 -63141765 - L1ME4a LINE L1 -27 6097 5954 2 1020 469 339 55 42 chr13 57142577 57142907 -63141405 - L1ME4a LINE L1 -249 5875 5542 2 1020 544 281 121 74 chr13 57142967 57143305 -63141007 - ORR1D2 LTR MaLR -8 362 9 2 1020 1448 327 135 60 chr13 57143294 57144733 -63139579 - MTEb-int LTR MaLR -34 1546 1 2 1020 353 297 81 64 chr13 57144734 57145070 -63139242 - MTEb LTR MaLR -4 375 9 2 1020 1247 139 205 32 chr13 57145071 57145354 -63138958 + ORR1B2 LTR MaLR 2 333 -34 2 1020 1036 53 0 0 chr13 57145353 57145485 -63138827 + B1_Mus1 SINE Alu 6 137 -11 2 1020 216 0 0 0 chr13 57145485 57145509 -63138803 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1020 346 146 0 18 chr13 57145509 57145565 -63138747 + ORR1B2 LTR MaLR 313 367 0 2 1020 526 206 156 10 chr13 57146757 57146937 -63137375 + RMER15 LTR ERVL 299 575 0 2 1020 2863 261 80 30 chr13 57147247 57147317 -63136995 - Lx8 LINE L1 -264 7209 7127 2 127 2815 28 0 3 chr13 57147317 57147640 -63136672 - RLTRETN_Mm LTR ERVK 0 322 1 2 1021 2863 261 80 30 chr13 57147640 57148470 -63135842 - Lx8 LINE L1 -347 7126 6264 2 1021 1071 123 201 36 chr13 57148470 57148664 -63135648 - URR1A DNA MER1_type 0 226 1 2 1021 2863 261 80 30 chr13 57148664 57148732 -63135580 - Lx8 LINE L1 -1210 6263 6192 2 1021 1214 62 0 0 chr13 57148761 57148907 -63135405 + B1_Mus1 SINE Alu 3 148 0 2 1021 790 118 27 13 chr13 57148934 57149163 -63135149 + (TG)n Simple_repeat Simple_repeat 1 232 0 2 1021 275 347 13 0 chr13 57149180 57149255 -63135057 - RSINE1 SINE B4 -4 161 86 2 1021 237 83 0 0 chr13 57149500 57149536 -63134776 + (TCCCC)n Simple_repeat Simple_repeat 2 37 0 2 1021 441 283 105 7 chr13 57149630 57149783 -63134529 - Lx7 LINE L1 -1778 5918 5672 2 1021 1522 186 116 51 chr13 57149783 57150196 -63134116 + RMER10A LTR ERVL 1 440 -2 2 1021 808 272 50 34 chr13 57150196 57150505 -63133807 - Lx7 LINE L1 -773 5671 5354 2 1021 23 0 0 0 chr13 57150600 57150623 -63133689 + AT_rich Low_complexity Low_complexity 1 23 0 2 1021 217 354 70 11 chr13 57150980 57151244 -63133068 + L2a LINE L2 2885 3162 -264 2 1021 280 275 154 0 chr13 57152784 57152875 -63131437 - RSINE1 SINE B4 -60 105 1 2 1021 734 250 62 24 chr13 57153584 57153793 -63130519 - ID_B1 SINE B4 -6 218 2 2 1021 450 274 9 0 chr13 57153818 57153924 -63130388 + PB1D10 SINE Alu 5 111 -6 2 1021 423 0 0 0 chr13 57153983 57154030 -63130282 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1021 682 301 91 11 chr13 57154282 57154635 -63129677 - L1MB7 LINE L1 -160 6024 5644 2 1021 285 292 19 8 chr13 57154791 57154923 -63129389 - L1MB7 LINE L1 -760 5386 5252 2 1021 430 267 128 56 chr13 57155223 57155383 -63128929 - L1M4 LINE L1 -524 6163 5993 2 1021 343 87 0 0 chr13 57155525 57155571 -63128741 - HAL1-3A_ME LINE L1 -846 2012 1967 2 1021 1225 318 82 16 chr13 57155581 57156284 -63128028 - L1M4 LINE L1 -2940 3701 2952 2 1021 1178 285 65 73 chr13 57156722 57157457 -63126855 - L1M4 LINE L1 -5794 748 20 2 1021 21 0 0 0 chr13 57157565 57157586 -63126726 + AT_rich Low_complexity Low_complexity 1 21 0 2 1021 731 218 27 34 chr13 57157586 57157733 -63126579 - B1_Mur3 SINE Alu -2 147 2 2 1021 444 250 7 90 chr13 57157606 57157751 -63126561 - MT2B LTR ERVL -319 282 150 2 1021 21 71 0 0 chr13 57157905 57157947 -63126365 + AT_rich Low_complexity Low_complexity 1 42 0 2 1021 306 0 0 0 chr13 57159046 57159080 -63125232 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1021 531 261 88 44 chr13 57159164 57159324 -63124988 - ID_B1 SINE B4 -57 167 1 2 1021 584 248 6 69 chr13 57159589 57159762 -63124550 + RSINE1 SINE B4 4 165 0 2 1021 1121 86 0 0 chr13 57159956 57160096 -63124216 + B1_Mus1 SINE Alu 1 140 -8 2 1021 818 110 0 14 chr13 57160098 57160236 -63124076 + (GAAA)n Simple_repeat Simple_repeat 3 138 0 2 1021 856 243 34 0 chr13 57160648 57160854 -63123458 + B3 SINE B2 1 213 -3 2 1021 400 332 44 14 chr13 57161649 57161904 -63122408 - L1M5 LINE L1 -635 5809 5539 2 1021 1325 246 66 17 chr13 57163332 57163680 -63120632 + ORR1D2 LTR MaLR 6 370 0 2 1021 24 32 0 0 chr13 57163850 57163881 -63120431 + AT_rich Low_complexity Low_complexity 1 31 0 2 1021 233 273 72 32 chr13 57163920 57164045 -63120267 - L1MA5 LINE L1 -359 5941 5812 2 1021 4070 204 90 104 chr13 57164985 57166238 -63118074 + RMER12 LTR ERVK 1 1236 -86 2 1021 6141 76 4 7 chr13 57166296 57167104 -63117208 - L1_Mus3 LINE L1 -6 6632 5828 2 1021 2085 153 41 61 chr13 57167104 57167795 -63116517 - RMER17D2 LTR ERVK 0 809 1 2 1021 7452 113 13 5 chr13 57167797 57168906 -63115406 - L1_Mm LINE L1 -52 5831 4714 2 1021 3021 116 123 20 chr13 57168906 57169417 -63114895 + LTRIS2 LTR ERV1 1 564 0 2 1021 10481 124 42 3 chr13 57169427 57171137 -63113175 + L1_Mm LINE L1 2901 4676 -1207 2 1021 474 294 24 44 chr13 57171152 57171358 -63112954 + RMER12 LTR ERVK 1121 1322 0 2 1021 413 250 158 0 chr13 57171480 57171600 -63112712 + B1F1 SINE Alu 2 140 -9 2 1021 1123 239 112 15 chr13 57171639 57171979 -63112333 + MTD LTR MaLR 26 398 -21 2 1021 2181 104 62 0 chr13 57172066 57172402 -63111910 + RLTR9A LTR ERVK 1 357 -11 2 1021 1218 124 16 0 chr13 57172474 57172659 -63111653 - B2_Mm2 SINE B2 -7 188 1 2 1021 577 214 168 16 chr13 57172781 57172966 -63111346 - B3 SINE B2 0 216 4 2 1021 3919 54 0 0 chr13 57173003 57173469 -63110843 - L1Md_F2 LINE L1 -64 5819 5354 2 1021 5792 76 4 12 chr13 57173470 57174269 -63110043 + L1Md_F2 LINE L1 5816 6582 0 2 1021 235 282 115 45 chr13 57174597 57174753 -63109559 + MER113 DNA MER1_type 351 517 -4 2 1021 192 77 0 0 chr13 57174857 57174883 -63109429 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1021 537 315 177 46 chr13 57174989 57175581 -63108731 + MER97a DNA MER1_type? 44 713 -181 2 1021 567 107 0 0 chr13 57177096 57177180 -63107132 + (TCCC)n Simple_repeat Simple_repeat 3 86 0 2 1021 2272 98 28 19 chr13 57177768 57178092 -63106220 + ORR1A2 LTR MaLR 1 327 0 2 1021 744 179 0 0 chr13 57178597 57178835 -63105477 + (TG)n Simple_repeat Simple_repeat 1 238 0 2 1021 522 212 0 0 chr13 57178850 57179015 -63105297 + (TG)n Simple_repeat Simple_repeat 2 166 0 2 1021 275 252 9 0 chr13 57180563 57180674 -63103638 + (TA)n Simple_repeat Simple_repeat 1 112 0 2 1021 612 246 0 0 chr13 57182061 57182236 -63102076 + (TG)n Simple_repeat Simple_repeat 2 176 0 2 1021 524 309 47 19 chr13 57182241 57182452 -63101860 - MTE2b LTR MaLR -162 217 1 2 1021 279 315 36 36 chr13 57182587 57182699 -63101613 - ORR1E LTR MaLR -228 131 20 2 1021 242 299 51 29 chr13 57182820 57182958 -63101354 + L1MA6 LINE L1 6145 6285 -15 2 1021 817 185 6 6 chr13 57183327 57183357 -63100955 + polypyrimidine Low_complexity Low_complexity 151 180 0 2 1021 1036 118 0 27 chr13 57183357 57183540 -63100772 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 2 1021 817 185 6 6 chr13 57183540 57183688 -63100624 + CT-rich Low_complexity Low_complexity 2 150 0 2 1021 2504 156 12 14 chr13 57184411 57184833 -63099479 - MTC LTR MaLR 0 421 1 2 1021 4869 175 107 58 chr13 57184837 57186036 -63098276 - MTC-int LTR MaLR 0 1258 1 2 1021 1578 198 95 16 chr13 57186045 57186425 -63097887 - MTC LTR MaLR -11 410 1 2 1021 809 264 70 39 chr13 57186440 57186724 -63097588 + MTD LTR MaLR 127 419 0 2 1021 1534 141 44 258 chr13 57186843 57187339 -63096973 + ORR1B1 LTR MaLR 1 390 -4 2 1021 366 61 0 0 chr13 57187358 57187407 -63096905 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1021 210 264 0 65 chr13 57188413 57188490 -63095822 + MIRb SINE MIR 108 179 -89 2 1021 186 133 0 0 chr13 57192595 57192625 -63091687 + (TCG)n Simple_repeat Simple_repeat 2 31 0 2 1021 843 138 0 0 chr13 57192623 57192761 -63091551 + (TTC)n Simple_repeat Simple_repeat 3 140 0 2 1021 610 284 38 5 chr13 57193146 57193330 -63090982 - ID_B1 SINE B4 -33 191 2 2 1021 614 194 24 24 chr13 57193758 57193927 -63090385 - Lx9 LINE L1 0 7644 7476 2 1021 205 176 0 0 chr13 57193927 57193961 -63090351 + (TATATG)n Simple_repeat Simple_repeat 6 39 0 2 1021 209 228 17 17 chr13 57194131 57194189 -63090123 + CT-rich Low_complexity Low_complexity 2 59 0 2 1021 294 29 0 0 chr13 57194251 57194286 -63090026 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1021 491 151 11 0 chr13 57194281 57194374 -63089938 + (TA)n Simple_repeat Simple_repeat 1 94 0 2 1021 694 127 59 0 chr13 57194497 57194615 -63089697 + B1_Mur4 SINE Alu 5 129 -21 2 1021 204 273 0 0 chr13 57194615 57194659 -63089653 + A-rich Low_complexity Low_complexity 1 44 0 2 1021 277 313 109 61 chr13 57195108 57195401 -63088911 + L1M5 LINE L1 3908 4214 -1932 2 1021 3777 196 45 25 chr13 57195927 57196728 -63087584 + RMER1A Other Other 207 887 -143 2 1021 348 24 0 0 chr13 57196728 57196769 -63087543 + (TGG)n Simple_repeat Simple_repeat 1 41 0 2 1021 3777 177 47 30 chr13 57196769 57196898 -63087414 + RMER1A Other Other 888 1025 -5 2 1021 468 273 0 0 chr13 57197207 57197372 -63086940 + (CA)n Simple_repeat Simple_repeat 2 166 0 2 1021 401 131 0 0 chr13 57197548 57197599 -63086713 - Lx3_Mus LINE L1 -1119 5890 5840 2 1021 2360 74 70 15 chr13 57197599 57197858 -63086454 + Lx3_Mus LINE L1 6649 6918 -91 2 1021 195 0 0 79 chr13 57197858 57197896 -63086416 + (TGGG)n Simple_repeat Simple_repeat 1 35 0 2 1021 2360 74 70 15 chr13 57197896 57197978 -63086334 + Lx3_Mus LINE L1 6919 7008 -1 2 1021 21 57 0 0 chr13 57197991 57198026 -63086286 + AT_rich Low_complexity Low_complexity 1 35 0 2 1021 318 279 70 14 chr13 57198037 57198179 -63086133 - L1MD LINE L1 -1805 4341 4192 2 1021 342 0 0 0 chr13 57198181 57198219 -63086093 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 1021 330 301 70 46 chr13 57198313 57198598 -63085714 + L1M5 LINE L1 3327 3618 -2528 2 1021 265 238 133 44 chr13 57198719 57198899 -63085413 + L1M5 LINE L1 3789 3984 -2162 2 1021 204 200 0 0 chr13 57199584 57199619 -63084693 + polypyrimidine Low_complexity Low_complexity 4 38 0 2 1021 229 233 148 104 chr13 57199619 57199734 -63084578 - ID_B1 SINE B4 0 224 105 2 1021 213 250 16 0 chr13 57199901 57199965 -63084347 + (TA)n Simple_repeat Simple_repeat 2 66 0 2 1021 317 286 190 14 chr13 57201105 57201622 -63082690 + L1M3 LINE L1 2262 2881 -3265 2 1021 2291 60 3 42 chr13 57201733 57202065 -63082247 - ORR1A2 LTR MaLR -8 319 1 2 1021 255 268 62 39 chr13 57202065 57202193 -63082119 + L1M3 LINE L1 2978 3108 -3038 2 1021 665 194 6 0 chr13 57204130 57204290 -63080022 + CT-rich Low_complexity Low_complexity 2 162 0 2 1021 207 291 0 0 chr13 57204296 57204351 -63079961 + (TATATG)n Simple_repeat Simple_repeat 4 58 0 2 1021 1601 309 82 36 chr13 57204372 57205031 -63079281 + Lx8 LINE L1 6567 7255 -218 2 1021 815 63 31 0 chr13 57205105 57205232 -63079080 + (GA)n Simple_repeat Simple_repeat 1 131 0 3 1021 777 256 121 64 chr13 57205360 57205560 -63078752 + MLT1B LTR MaLR 3 201 -189 3 1021 306 0 0 0 chr13 57205560 57205594 -63078718 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1021 777 256 121 64 chr13 57205594 57205739 -63078573 + MLT1B LTR MaLR 202 368 -22 3 1021 2346 111 3 0 chr13 57206580 57206905 -63077407 + ORR1A3 LTR MaLR 1 326 0 3 1021 2076 137 72 9 chr13 57207249 57207594 -63076718 - ORR1B2 LTR MaLR 0 367 1 3 1021 207 0 0 0 chr13 57211350 57211373 -63072939 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1021 730 177 0 0 chr13 57212231 57212361 -63071951 + B1_Mus1 SINE Alu 14 143 -5 3 1021 209 33 33 0 chr13 57213271 57213301 -63071011 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 3 1021 342 67 0 0 chr13 57213329 57213374 -63070938 + (TA)n Simple_repeat Simple_repeat 1 45 0 3 1021 297 0 0 0 chr13 57213374 57213406 -63070906 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1021 561 266 90 23 chr13 57213462 57213639 -63070673 + B3 SINE B2 9 197 -19 3 1021 539 230 29 36 chr13 57213683 57213823 -63070489 + RSINE1 SINE B4 27 165 0 3 1021 907 293 129 23 chr13 57213881 57214401 -63069911 + L1MB3 LINE L1 5608 6182 -1 3 1021 831 267 67 35 chr13 57214653 57214936 -63069376 + B4 SINE B4 1 292 0 3 1021 1773 252 60 35 chr13 57215489 57216053 -63068259 + Lx8 LINE L1 6551 7128 -345 3 1021 659 191 7 0 chr13 57216276 57216423 -63067889 + (TGGA)n Simple_repeat Simple_repeat 3 150 0 3 1021 351 65 0 0 chr13 57217886 57217932 -63066380 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 3 1021 222 257 112 75 chr13 57217933 57218013 -63066299 - PB1D10 SINE Alu -11 106 24 3 1021 281 260 128 5 chr13 57218163 57218364 -63065948 - MIR SINE MIR -17 251 34 3 1021 3125 61 8 8 chr13 57220350 57220746 -63063566 - MTA_Mm LTR MaLR 0 396 1 3 1021 2345 81 3 75 chr13 57220746 57221095 -63063217 + ORR1A2 LTR MaLR 4 327 0 3 1021 3668 205 46 60 chr13 57221140 57222066 -63062246 + Lx9 LINE L1 6731 7643 -1 3 1021 230 286 79 79 chr13 57222106 57222258 -63062054 - L1ME2z LINE L1 -286 6158 6007 3 1021 186 71 0 0 chr13 57222609 57222637 -63061675 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1021 1095 81 0 0 chr13 57222637 57222773 -63061539 - B1_Mus1 SINE Alu -8 140 5 3 1021 1074 117 6 50 chr13 57222777 57222792 -63061520 - B2_Mm2 SINE B2 -23 172 160 3 1021 240 35 0 0 chr13 57222792 57222821 -63061491 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 1021 1074 117 6 50 chr13 57222821 57222985 -63061327 - B2_Mm2 SINE B2 -36 159 1 3 1021 553 196 44 122 chr13 57222990 57223170 -63061142 - Lx8 LINE L1 -368 7105 6940 3 1021 2525 73 0 58 chr13 57223213 57223560 -63060752 - ORR1A2 LTR MaLR 0 327 1 3 1021 500 248 9 35 chr13 57223870 57223983 -63060329 + B3 SINE B2 7 116 -100 3 1021 901 284 150 35 chr13 57224492 57224832 -63059480 - MTE2b LTR MaLR 0 379 1 3 1021 547 195 97 45 chr13 57226238 57226372 -63057940 + B1_Mur3 SINE Alu 1 141 -8 3 1021 361 290 0 0 chr13 57227293 57227386 -63056926 + PB1D10 SINE Alu 22 114 -3 3 1021 2038 144 98 19 chr13 57227862 57228238 -63056074 - MTC LTR MaLR -10 411 6 3 1021 297 0 0 0 chr13 57228497 57228530 -63055782 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1021 523 171 445 28 chr13 57228530 57228741 -63055571 - MTD LTR MaLR -3 416 118 3 1021 1519 199 132 19 chr13 57228814 57229178 -63055134 + MTD LTR MaLR 1 405 -14 3 1021 232 189 0 36 chr13 57229192 57229247 -63055065 + MTEb LTR MaLR 321 373 -6 3 1021 368 288 16 17 chr13 57230013 57230177 -63054135 + MER57-int LTR ERV1 90 255 -7282 3 1021 203 0 0 36 chr13 57231028 57231056 -63053256 + (TTA)n Simple_repeat Simple_repeat 2 28 0 3 1021 512 227 11 11 chr13 57231056 57231234 -63053078 + CT-rich Low_complexity Low_complexity 3 180 0 3 1021 2962 49 8 11 chr13 57231439 57231812 -63052500 + L1_Mus1 LINE L1 6196 6567 0 3 1021 255 103 0 0 chr13 57231941 57231980 -63052332 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1021 412 213 0 0 chr13 57232895 57232970 -63051342 + B3A SINE B2 17 91 -107 3 1021 63 71 0 0 chr13 57232997 57233123 -63051189 + AT_rich Low_complexity Low_complexity 1 126 0 3 1021 1139 56 14 0 chr13 57233188 57233332 -63050980 - B1_Mus2 SINE Alu 0 147 2 3 1021 576 269 106 37 chr13 57234243 57234432 -63049880 + MER57A-int LTR ERV1 3420 3723 -1633 3 1021 1043 303 59 33 chr13 57234609 57235066 -63049246 + MER57A-int LTR ERV1 5287 5755 -432 3 1021 189 0 0 0 chr13 57235407 57235428 -63048884 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1021 773 60 244 17 chr13 57235428 57235547 -63048765 - B1_Mus2 SINE Alu 0 147 2 3 1021 1204 34 7 7 chr13 57235624 57235771 -63048541 - B1_Mm SINE Alu 0 147 1 3 1021 561 324 62 33 chr13 57236265 57236476 -63047836 + ID_B1 SINE B4 2 218 -6 3 1021 1354 98 5 5 chr13 57237337 57237532 -63046780 - B2_Mm2 SINE B2 0 195 1 3 1021 186 268 99 99 chr13 57237645 57237736 -63046576 - L2a LINE L2 -33 3393 3303 3 1021 306 324 19 19 chr13 57237881 57237985 -63046327 - PB1D10 SINE Alu -12 105 2 3 1021 241 258 88 88 chr13 57238512 57238580 -63045732 - ID_B1 SINE B4 -94 130 63 3 1021 186 118 0 0 chr13 57239128 57239162 -63045150 + (TGGGGG)n Simple_repeat Simple_repeat 3 36 0 3 1021 35 24 0 0 chr13 57239779 57239821 -63044491 + AT_rich Low_complexity Low_complexity 1 42 0 3 1021 1119 226 5 0 chr13 57239832 57240036 -63044276 + B3 SINE B2 3 207 -9 3 1021 234 293 52 26 chr13 57241751 57241828 -63042484 - MIRc SINE MIR -137 131 53 3 1021 4909 94 43 14 chr13 57242294 57243017 -63041295 + Lx2 LINE L1 5646 6389 -608 3 1021 297 0 0 0 chr13 57243116 57243149 -63041163 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1021 321 26 0 0 chr13 57243149 57243186 -63041126 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1021 198 0 0 0 chr13 57243231 57243253 -63041059 + (GA)n Simple_repeat Simple_repeat 1 22 0 3 1021 213 39 0 0 chr13 57243287 57243313 -63040999 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1021 315 0 0 0 chr13 57243313 57243347 -63040965 + (GA)n Simple_repeat Simple_repeat 1 35 0 3 1021 261 0 0 0 chr13 57243384 57243413 -63040899 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1021 199 338 51 14 chr13 57244251 57244389 -63039923 + L2c LINE L2 3183 3325 -62 3 1021 347 296 107 74 chr13 57244867 57245151 -63039161 - L1M2 LINE L1 -720 5459 5158 3 1021 648 206 55 0 chr13 57245315 57245461 -63038851 - B3 SINE B2 -60 156 3 3 1021 193 333 80 58 chr13 57245773 57245961 -63038351 - MIR SINE MIR -12 250 59 3 1021 852 234 32 21 chr13 57246120 57246308 -63038004 + B3 SINE B2 27 216 0 3 1021 254 331 39 47 chr13 57246545 57246606 -63037706 + MER5A DNA MER1_type 62 123 -66 3 1021 1188 61 0 7 chr13 57246606 57246755 -63037557 + B1_Mus1 SINE Alu 1 148 0 3 1021 254 331 39 47 chr13 57246755 57246820 -63037492 + MER5A DNA MER1_type 124 187 -2 3 1021 476 271 25 38 chr13 57248346 57248503 -63035809 + RSINE1 SINE B4 3 157 -8 3 1021 239 250 79 141 chr13 57249851 57250028 -63034284 + RLTR25B LTR ERVK 320 485 -543 3 1021 562 238 33 0 chr13 57249934 57250056 -63034256 + ID_B1 SINE B4 99 224 0 3 1021 1011 150 0 0 chr13 57250421 57250594 -63033718 + (TATATG)n Simple_repeat Simple_repeat 4 176 0 3 1021 180 0 0 0 chr13 57251559 57251579 -63032733 + (C)n Simple_repeat Simple_repeat 1 20 0 3 1021 213 219 0 47 chr13 57253136 57253179 -63031133 - MIRm SINE MIR -6 270 230 3 1021 183 262 24 0 chr13 57253142 57253184 -63031128 - L2c LINE L2 -12 3375 3333 3 1021 244 282 27 27 chr13 57254331 57254404 -63029908 - MER103 DNA DNA -21 145 73 3 1021 236 304 43 107 chr13 57255066 57255206 -63029106 + MIRb SINE MIR 24 154 -114 3 1021 183 216 26 0 chr13 57255756 57255799 -63028513 - MIR SINE MIR -56 152 108 3 1021 360 0 0 0 chr13 57256348 57256388 -63027924 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1021 354 354 12 12 chr13 57256389 57256560 -63027752 - Lx8 LINE L1 -195 7449 7169 3 1021 232 232 0 35 chr13 57257129 57257214 -63027098 + GA-rich Low_complexity Low_complexity 3 84 0 3 1021 207 100 0 0 chr13 57258762 57258792 -63025520 + (TCC)n Simple_repeat Simple_repeat 2 31 0 3 1021 225 313 24 0 chr13 57258900 57258983 -63025329 - L1MD3 LINE L1 -311 7684 7600 3 1021 782 266 28 0 chr13 57259249 57259426 -63024886 - B3A SINE B2 -16 182 1 3 1021 529 266 127 32 chr13 57259426 57259678 -63024634 - L1M5 LINE L1 -1760 4386 4111 3 1021 332 153 16 2 chr13 57259704 57259772 -63024540 + ORR1C2 LTR MaLR 311 384 0 3 1021 3166 185 12 9 chr13 57259808 57260390 -63023922 + ORR1C2-int LTR MaLR 2 585 -924 3 1021 1711 161 16 108 chr13 57260399 57260769 -63023543 - ORR1C1 LTR MaLR -11 367 32 3 1021 225 244 0 0 chr13 57261768 57261813 -63022499 + B3A SINE B2 1 45 -153 3 1021 24 0 0 0 chr13 57261818 57261842 -63022470 + AT_rich Low_complexity Low_complexity 1 24 0 3 1021 603 177 0 0 chr13 57261913 57262043 -63022269 + CT-rich Low_complexity Low_complexity 1 130 0 3 1021 648 300 40 11 chr13 57262059 57262335 -63021977 - Lx7 LINE L1 -276 7420 7137 3 1021 891 247 0 0 chr13 57262337 57262511 -63021801 + B3 SINE B2 32 205 -11 3 1021 683 253 20 0 chr13 57262648 57262798 -63021514 + RSINE1 SINE B4 12 164 -1 3 1021 441 139 76 0 chr13 57263468 57263547 -63020765 + RLTR44D LTR ERVK 368 486 0 3 1021 518 219 42 50 chr13 57263547 57263667 -63020645 - B3A SINE B2 -79 119 1 3 1021 738 262 37 16 chr13 57264173 57264363 -63019949 - B3A SINE B2 -3 195 2 3 1021 1121 97 0 0 chr13 57264683 57264828 -63019484 + B1_Mus1 SINE Alu 1 145 -3 3 1021 270 0 0 0 chr13 57264828 57264858 -63019454 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 3 1021 243 188 0 0 chr13 57264906 57264954 -63019358 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1021 229 152 0 33 chr13 57265203 57265264 -63019048 - MT2A LTR ERVL -5 528 470 4 1021 441 66 0 0 chr13 57265266 57265327 -63018985 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1021 228 217 0 0 chr13 57265344 57265390 -63018922 - MT2A LTR ERVL -354 179 134 4 1021 491 269 6 76 chr13 57265409 57265498 -63018814 - MT2A LTR ERVL -387 146 67 4 1021 1227 155 56 14 chr13 57265498 57265714 -63018598 + URR1B DNA MER1_type 1 225 0 4 1021 491 269 6 76 chr13 57265714 57265781 -63018531 - MT2A LTR ERVL -467 66 1 4 1021 227 255 0 0 chr13 57266729 57266776 -63017536 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1021 1686 240 71 18 chr13 57267259 57267641 -63016671 + MTD LTR MaLR 18 419 0 4 1021 206 313 48 0 chr13 57267717 57267800 -63016512 - MIR SINE MIR -151 111 25 4 1021 24 67 0 0 chr13 57268223 57268268 -63016044 + AT_rich Low_complexity Low_complexity 1 45 0 4 1021 180 267 0 0 chr13 57268309 57268369 -63015943 + (CATA)n Simple_repeat Simple_repeat 1 60 0 4 1021 27 29 0 0 chr13 57268666 57268700 -63015612 + AT_rich Low_complexity Low_complexity 1 34 0 4 1021 482 221 130 30 chr13 57268793 57268922 -63015390 + ID_B1 SINE B4 82 223 -69 4 1021 252 0 0 0 chr13 57268959 57268987 -63015325 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 1021 623 13 0 13 chr13 57269524 57269601 -63014711 + (CAAAA)n Simple_repeat Simple_repeat 5 80 0 4 1021 354 378 47 13 chr13 57269760 57269996 -63014316 + LTR33C LTR ERVL 371 614 -15 4 1021 430 255 27 18 chr13 57270051 57270163 -63014149 - MLT1A1 LTR MaLR -12 396 284 4 1021 385 226 94 12 chr13 57270379 57270464 -63013848 - PB1D7 SINE Alu -2 125 34 4 1021 258 105 0 0 chr13 57271545 57271583 -63012729 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 4 1021 396 0 0 0 chr13 57275392 57275436 -63008876 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1021 380 322 53 10 chr13 57275575 57275782 -63008530 - L1M5 LINE L1 -365 5759 5544 4 1021 2350 88 32 6 chr13 57276143 57276487 -63007825 + L1_Mus4 LINE L1 6271 6623 -13 4 1021 354 23 0 0 chr13 57276490 57276533 -63007779 + (CAGAGA)n Simple_repeat Simple_repeat 4 46 0 4 1021 1850 216 22 3 chr13 57277377 57277744 -63006568 - Lx5 LINE L1 -1 7049 6676 4 1021 243 0 0 0 chr13 57278251 57278278 -63006034 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 127 234 298 93 107 chr13 57278442 57278731 -63005581 - B4A SINE B4 -7 285 1 4 1022 241 280 110 29 chr13 57279193 57279329 -63004983 - L1MA6 LINE L1 0 6300 6154 4 1022 420 301 21 47 chr13 57279384 57279576 -63004736 - L1MA6 LINE L1 -249 6051 5865 4 1022 829 302 7 46 chr13 57279595 57279876 -63004436 - Lx8 LINE L1 0 7473 7204 4 1022 1966 240 120 24 chr13 57279923 57280541 -63003771 - Lx8 LINE L1 -375 7098 6422 4 1022 387 283 22 45 chr13 57280542 57280801 -63003511 - L1MA6 LINE L1 -535 5756 5504 4 1022 399 41 0 0 chr13 57281060 57281109 -63003203 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1022 969 236 8 29 chr13 57281111 57281653 -63002659 - RMER17C LTR ERVK 0 410 1 4 1022 321 209 11 23 chr13 57282393 57282481 -63001831 - RMER5 LTR ERV1 -18 516 430 4 1022 629 215 0 7 chr13 57283392 57283542 -63000770 + GA-rich Low_complexity Low_complexity 2 150 0 4 1022 736 27 0 43 chr13 57283507 57283623 -63000689 + (GAAAA)n Simple_repeat Simple_repeat 4 114 0 4 1022 461 323 26 26 chr13 57283937 57284169 -63000143 + RLTR12B LTR ERVK 1 232 -296 4 1022 771 162 45 7 chr13 57284167 57284322 -62999990 + RLTR11A LTR ERVK 368 528 0 4 1022 235 314 93 0 chr13 57284870 57284988 -62999324 - MER5B DNA MER1_type -4 174 46 4 1022 531 101 0 0 chr13 57285217 57285296 -62999016 + (TC)n Simple_repeat Simple_repeat 1 79 0 4 1022 513 230 0 0 chr13 57285295 57285473 -62998839 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 1022 275 85 21 0 chr13 57285529 57285576 -62998736 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1022 447 202 16 66 chr13 57287305 57287427 -62996885 - PB1D9 SINE Alu 0 120 5 4 1022 273 307 39 31 chr13 57288107 57288237 -62996075 + L1MC LINE L1 5475 5605 -839 4 1022 207 0 0 0 chr13 57288291 57288314 -62995998 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1022 837 229 29 58 chr13 57288327 57288535 -62995777 + B3 SINE B2 6 207 -9 4 1022 298 290 98 35 chr13 57288641 57288784 -62995528 + RSINE1 SINE B4 12 163 -2 4 1022 839 313 84 79 chr13 57288979 57289433 -62994879 + LTR53 LTR ERVL 64 519 0 4 1022 816 325 52 72 chr13 57289503 57289690 -62994622 + Tigger7 DNA MER2_type 57 225 -2266 4 1022 3397 26 13 10 chr13 57289690 57290085 -62994227 - MTA_Mm LTR MaLR 0 396 1 4 1022 816 325 52 72 chr13 57290085 57290358 -62993954 + Tigger7 DNA MER2_type 226 508 -1983 4 1022 397 298 9 9 chr13 57290383 57290498 -62993814 + Tigger7 DNA MER2_type 2373 2487 -4 4 1022 187 210 47 31 chr13 57290784 57290848 -62993464 + MIR SINE MIR 81 145 -63 4 1022 1361 64 40 0 chr13 57291508 57291681 -62992631 + B2_Mm2 SINE B2 2 181 -14 4 1022 1035 114 0 17 chr13 57291691 57291869 -62992443 + (GAAA)n Simple_repeat Simple_repeat 4 178 0 4 1022 963 238 100 32 chr13 57291960 57292299 -62992013 - ORR1D2 LTR MaLR -8 362 1 4 1022 569 305 88 103 chr13 57292548 57292982 -62991330 - L1MB2 LINE L1 -63 6108 5663 4 1022 1022 200 14 9 chr13 57292982 57293194 -62991118 - B3 SINE B2 0 216 4 4 1022 569 305 88 103 chr13 57293194 57293245 -62991067 - L1MB2 LINE L1 -509 5662 5616 4 1022 2334 132 65 17 chr13 57293245 57293647 -62990665 - MTC LTR MaLR 0 421 1 4 1022 569 305 88 103 chr13 57293647 57293862 -62990450 - L1MB2 LINE L1 -556 5615 5417 4 1022 370 283 74 51 chr13 57293859 57294116 -62990196 - L1MA10 LINE L1 -2 6332 6070 4 1022 204 240 0 20 chr13 57294124 57294175 -62990137 + (CATATA)n Simple_repeat Simple_repeat 2 51 0 4 1022 339 25 0 0 chr13 57294189 57294229 -62990083 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1022 775 201 39 7 chr13 57294236 57294391 -62989921 - B3A SINE B2 -38 160 1 4 1022 386 230 43 25 chr13 57294524 57294660 -62989652 - L1MB2 LINE L1 -748 5426 5294 4 1022 270 205 0 0 chr13 57294660 57294743 -62989569 + (TCTG)n Simple_repeat Simple_repeat 1 83 0 4 1022 720 158 0 0 chr13 57294744 57294877 -62989435 + (TTGG)n Simple_repeat Simple_repeat 2 134 0 4 1022 346 314 68 19 chr13 57294878 57295040 -62989272 - L1MB2 LINE L1 -890 5250 5081 4 1022 227 119 0 0 chr13 57296395 57296437 -62987875 + Lx9 LINE L1 7603 7644 0 4 1022 270 176 0 0 chr13 57296624 57296675 -62987637 + (CAT)n Simple_repeat Simple_repeat 3 53 0 4 1022 640 182 23 6 chr13 57296678 57296855 -62987457 + (CCA)n Simple_repeat Simple_repeat 1 180 0 4 1022 777 152 36 52 chr13 57297901 57298131 -62986181 - LTRIS3 LTR ERV1 0 512 227 4 1022 327 134 60 0 chr13 57298139 57298206 -62986106 - LTRIS3 LTR ERV1 -376 71 1 4 1022 868 239 77 137 chr13 57298704 57298728 -62985584 - MTE2a LTR MaLR 0 379 356 4 1022 321 26 0 0 chr13 57298728 57298766 -62985546 + (TAA)n Simple_repeat Simple_repeat 3 40 0 4 1022 868 239 77 137 chr13 57298766 57299144 -62985168 - MTE2a LTR MaLR -24 355 1 4 1022 234 143 24 0 chr13 57299505 57299547 -62984765 - RMER19A LTR ERVK -694 43 1 4 1022 181 264 55 14 chr13 57299854 57299927 -62984385 + L2 LINE L2 2846 2921 -498 4 1022 295 309 12 0 chr13 57300123 57300207 -62984105 - PB1D10 SINE Alu -32 85 1 4 1022 1079 268 127 16 chr13 57300258 57300819 -62983493 - L1M2 LINE L1 -848 5295 4673 4 1022 252 0 0 0 chr13 57300821 57300849 -62983463 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1022 332 328 15 7 chr13 57300908 57301043 -62983269 - L1M2 LINE L1 -1869 4274 4139 4 1022 1839 177 28 0 chr13 57301105 57301467 -62982845 - RLTR14 LTR ERV1 0 382 11 4 1022 704 254 61 15 chr13 57301486 57301750 -62982562 - L1M2 LINE L1 -2203 3940 3665 4 1022 482 231 75 23 chr13 57301770 57301845 -62982467 - RLTR20D LTR ERVK -16 562 481 4 1022 378 0 0 0 chr13 57301845 57301887 -62982425 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1022 482 231 75 23 chr13 57301887 57301944 -62982368 - RLTR20D LTR ERVK -98 480 424 4 1022 1000 181 62 83 chr13 57301934 57302223 -62982089 - RLTR20D LTR ERVK -285 283 1 4 1022 248 222 0 0 chr13 57302223 57302277 -62982035 - L1M2 LINE L1 -2475 3668 3615 4 1022 221 254 197 0 chr13 57302290 57302361 -62981951 - B4A SINE B4 -200 92 8 4 1022 1434 184 184 90 chr13 57302718 57303142 -62981170 + MT2A LTR ERVL 1 464 -69 4 1022 231 189 0 0 chr13 57303153 57303206 -62981106 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1022 365 169 14 0 chr13 57303229 57303300 -62981012 - MT2A LTR ERVL -356 177 106 4 1022 378 0 0 0 chr13 57303300 57303342 -62980970 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1022 38887 39 1 3 chr13 57303358 57309596 -62974716 - L1Md_T LINE L1 -1 6584 265 4 1022 22322 150 56 17 chr13 57309596 57311159 -62973153 + MERVL_2A-int LTR ERVL 254 1834 -3927 4 1022 2643 149 12 5 chr13 57311159 57311577 -62972735 + MTC LTR MaLR 1 421 0 4 1022 22322 160 63 15 chr13 57311577 57314136 -62970176 + MERVL_2A-int LTR ERVL 1835 4561 -1200 4 1022 888 179 73 12 chr13 57314147 57314311 -62970001 + MERVL_2A-int LTR ERVL 4627 4800 -961 4 1022 1020 224 122 135 chr13 57314313 57314786 -62969526 + MT2B2 LTR ERVL 3 584 0 4 1022 1784 207 12 3 chr13 57314788 57315118 -62969194 + MERVL_2A-int LTR ERVL 4798 5130 -631 4 1022 2092 106 131 3 chr13 57315118 57315478 -62968834 - RLTR33 LTR ERVK -2 676 271 4 1022 601 157 0 0 chr13 57315470 57315572 -62968740 + RLTR33 LTR ERVK 575 676 -2 4 1022 1062 175 20 10 chr13 57315573 57315775 -62968537 + MERVL_2A-int LTR ERVL 5425 5628 -133 4 1022 249 239 0 40 chr13 57315775 57315849 -62968463 + ORR1A3-int LTR MaLR 567 637 -1326 4 1022 327 161 0 0 chr13 57315851 57315907 -62968405 + MERVL_2A-int LTR ERVL 5706 5761 0 4 1022 805 284 79 83 chr13 57315907 57316402 -62967910 + MT2A LTR ERVL 1 493 -40 4 1022 416 213 0 8 chr13 57316402 57316525 -62967787 + (TA)n Simple_repeat Simple_repeat 2 123 0 4 1022 1974 246 24 16 chr13 57317896 57318392 -62965920 + RMER5 LTR ERV1 13 512 -22 4 1022 381 43 0 0 chr13 57318421 57318468 -62965844 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1022 397 291 6 44 chr13 57320503 57320686 -62963626 + G-rich Low_complexity Low_complexity 2 177 0 4 1022 423 0 0 0 chr13 57321357 57321404 -62962908 + (TGG)n Simple_repeat Simple_repeat 1 47 0 4 1022 282 175 15 45 chr13 57321426 57321492 -62962820 + tRNA-Ala-GCY_ tRNA tRNA 4 67 -8 4 1022 278 221 14 42 chr13 57321431 57321502 -62962810 + ID4 SINE ID 15 83 0 4 1022 2646 71 3 0 chr13 57321520 57321846 -62962466 - ORR1A2 LTR MaLR 0 327 1 4 1022 184 267 36 4 chr13 57322744 57322836 -62961476 - MIR SINE MIR -67 195 98 4 1022 454 328 92 47 chr13 57322839 57323393 -62960919 + MLT1E3 LTR MaLR 69 624 0 4 1022 1054 278 78 46 chr13 57325062 57325537 -62958775 - RMER5 LTR ERV1 -10 524 35 4 1022 250 216 59 0 chr13 57325808 57325859 -62958453 + PB1D7 SINE Alu 1 54 -66 4 1022 22 35 0 0 chr13 57325879 57325908 -62958404 + AT_rich Low_complexity Low_complexity 1 29 0 4 1022 735 267 76 42 chr13 57327097 57327359 -62956953 - B4 SINE B4 -20 272 2 4 1022 279 133 0 0 chr13 57327507 57327552 -62956760 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 4 1022 320 254 41 66 chr13 57328399 57328521 -62955791 - MER117 DNA MER1_type -44 153 35 4 1022 1204 73 20 14 chr13 57328862 57329158 -62955154 + (TATG)n Simple_repeat Simple_repeat 1 297 0 4 1022 647 258 6 66 chr13 57329158 57329324 -62954988 - B3 SINE B2 -12 204 49 5 1022 1081 223 14 0 chr13 57329360 57329571 -62954741 + B3 SINE B2 2 215 -1 5 1022 300 120 0 0 chr13 57329674 57329724 -62954588 + (TTCTCC)n Simple_repeat Simple_repeat 6 55 0 5 1022 1599 22 0 0 chr13 57329725 57330083 -62954229 + (TCC)n Simple_repeat Simple_repeat 1 358 0 5 1022 456 19 0 0 chr13 57330789 57330842 -62953470 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 1022 294 264 200 0 chr13 57331712 57331852 -62952460 + RMER15 LTR ERVL 390 557 -18 5 1022 1178 136 63 0 chr13 57332285 57332491 -62951821 + URR1B DNA MER1_type 7 225 0 5 1022 21 0 0 0 chr13 57333757 57333778 -62950534 + AT_rich Low_complexity Low_complexity 1 21 0 5 1022 195 129 0 0 chr13 57334884 57334915 -62949397 + (CAA)n Simple_repeat Simple_repeat 2 32 0 5 1022 267 315 0 11 chr13 57335113 57335206 -62949106 - Lx8 LINE L1 -1 7472 7381 5 1022 225 287 133 12 chr13 57335209 57335449 -62948863 + RMER17D LTR ERVK 294 562 -327 5 1022 2907 299 47 34 chr13 57335461 57336528 -62947784 - Lx8 LINE L1 -221 7252 6172 5 1022 330 183 0 0 chr13 57336528 57336599 -62947713 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 1022 302 164 0 18 chr13 57336601 57336657 -62947655 - HAL1-3A_ME LINE L1 -831 2027 1973 5 1022 239 281 26 9 chr13 57336684 57336799 -62947513 + (TG)n Simple_repeat Simple_repeat 2 118 0 5 1022 1691 263 63 74 chr13 57337035 57337442 -62946870 + L1_Rod LINE L1 5120 5531 -316 5 1022 670 200 22 0 chr13 57337442 57337577 -62946735 + B1_Mur1 SINE Alu 3 140 -9 5 1022 1691 263 63 74 chr13 57337577 57337901 -62946411 + L1_Rod LINE L1 5532 5843 -4 5 1022 336 229 35 17 chr13 57338945 57339238 -62945074 + (CA)n Simple_repeat Simple_repeat 1 298 0 5 1022 365 219 18 28 chr13 57339257 57339543 -62944769 + (CA)n Simple_repeat Simple_repeat 1 282 0 5 1022 2584 71 12 0 chr13 57340647 57340970 -62943342 + ORR1A2 LTR MaLR 1 327 0 5 1022 427 274 75 128 chr13 57341018 57341206 -62943106 - MTE2b LTR MaLR 0 379 202 5 1022 890 227 63 10 chr13 57341719 57341924 -62942388 - MTE2b LTR MaLR -163 216 1 5 1022 421 377 78 29 chr13 57342181 57342424 -62941888 + MLT1J1 LTR MaLR 47 301 -143 5 1022 254 29 29 0 chr13 57342795 57342830 -62941482 + (ATTG)n Simple_repeat Simple_repeat 2 37 0 5 1022 1024 98 52 0 chr13 57342832 57342985 -62941327 - B2_Mm2 SINE B2 -14 181 21 5 1022 336 310 100 29 chr13 57343217 57343456 -62940856 - LTR37B LTR ERV1 0 468 213 5 1022 291 113 0 0 chr13 57343460 57343513 -62940799 + (GA)n Simple_repeat Simple_repeat 2 54 0 5 1022 1089 126 29 0 chr13 57344854 57345029 -62939283 + URR1A DNA MER1_type 46 225 -1 5 1022 1219 222 157 13 chr13 57345029 57345362 -62938950 + MTD LTR MaLR 32 405 -14 5 1022 588 261 0 0 chr13 57346097 57346212 -62938100 - B1F SINE Alu -32 117 3 5 1022 300 212 67 45 chr13 57346393 57346482 -62937830 + HAL1-3A_ME LINE L1 2265 2355 -503 5 1022 293 130 37 0 chr13 57347236 57347290 -62937022 - B1_Mur4 SINE Alu -1 149 94 5 1022 387 263 0 0 chr13 57347329 57347485 -62936827 + (CA)n Simple_repeat Simple_repeat 2 157 0 5 1022 330 328 85 59 chr13 57348318 57348590 -62935722 + MLT1D LTR MaLR 30 308 -197 5 1022 952 126 58 42 chr13 57348604 57348724 -62935588 + Lx3B LINE L1 6780 6893 -80 5 1022 456 19 0 0 chr13 57348724 57348777 -62935535 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1022 952 126 58 42 chr13 57348777 57348846 -62935466 + Lx3B LINE L1 6894 6972 -1 5 1022 436 276 136 13 chr13 57348858 57349057 -62935255 + MLT1D LTR MaLR 333 505 0 5 1022 345 312 160 30 chr13 57349057 57349277 -62935035 - LTR37B LTR ERV1 -186 282 33 5 1022 211 342 33 33 chr13 57349316 57349437 -62934875 + L2a LINE L2 3304 3424 -2 5 1022 196 333 29 48 chr13 57349481 57349585 -62934727 + L2a LINE L2 2980 3081 -345 5 1022 365 295 139 13 chr13 57349786 57349944 -62934368 + MIR SINE MIR 61 238 -24 5 1022 491 219 0 7 chr13 57350291 57350429 -62933883 + CT-rich Low_complexity Low_complexity 1 137 0 5 1022 2305 78 20 106 chr13 57351822 57352180 -62932132 + ORR1A2 LTR MaLR 1 327 0 5 1022 22 0 0 0 chr13 57352359 57352381 -62931931 + AT_rich Low_complexity Low_complexity 1 22 0 5 1022 484 283 143 14 chr13 57352537 57352677 -62931635 + RSINE1 SINE B4 2 159 -6 5 1022 24 53 0 0 chr13 57352691 57352729 -62931583 + AT_rich Low_complexity Low_complexity 1 38 0 5 1022 183 266 0 0 chr13 57353285 57353349 -62930963 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1022 1502 196 34 109 chr13 57353574 57353986 -62930326 - ORR1C2 LTR MaLR -1 383 3 5 1022 187 222 36 18 chr13 57354656 57354711 -62929601 - MIRm SINE MIR -133 143 88 5 1022 1107 273 77 6 chr13 57354830 57355143 -62929169 + ORR1E LTR MaLR 16 350 -9 5 1022 1031 150 94 70 chr13 57356584 57356828 -62927484 + ORR1B2 LTR MaLR 1 250 -117 5 1022 3779 56 21 0 chr13 57357625 57358090 -62926222 - MT2C_Mm LTR ERVL 0 475 1 5 1022 234 292 164 40 chr13 57358495 57358745 -62925567 - L2 LINE L2 -705 2714 2434 5 1022 288 0 0 0 chr13 57358758 57358790 -62925522 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1022 283 279 147 20 chr13 57358957 57359107 -62925205 + L2b LINE L2 3242 3417 -9 5 1022 257 284 48 72 chr13 57360622 57360747 -62923565 - RMER15 LTR ERVL -36 539 418 5 1022 235 221 21 95 chr13 57361616 57361711 -62922601 - Tigger7 DNA MER2_type -40 2451 2364 5 1022 243 108 0 0 chr13 57362291 57362328 -62921984 - Tigger7 DNA MER2_type -126 2365 2329 5 1022 240 185 31 0 chr13 57362334 57362399 -62921913 + (TTTG)n Simple_repeat Simple_repeat 1 67 0 5 1022 1165 55 7 0 chr13 57362405 57362551 -62921761 - B1_Mus2 SINE Alu 0 147 1 5 1022 1322 68 39 33 chr13 57362551 57362732 -62921580 - B2_Mm2 SINE B2 -9 186 4 5 1022 530 275 18 50 chr13 57363011 57363229 -62921083 + B3 SINE B2 2 212 -4 5 1022 210 37 0 0 chr13 57364580 57364607 -62919705 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1022 291 240 82 10 chr13 57365189 57365286 -62919026 - B3 SINE B2 -13 203 100 5 1022 1920 222 84 51 chr13 57365272 57365354 -62918958 - RLTR20C LTR ERVK -4 530 446 5 1022 477 0 0 0 chr13 57365354 57365407 -62918905 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1022 1920 222 84 51 chr13 57365407 57365837 -62918475 - RLTR20C LTR ERVK -89 445 3 5 1022 364 306 80 9 chr13 57365837 57365879 -62918433 - B3 SINE B2 -95 121 71 5 1022 477 0 0 0 chr13 57365879 57365932 -62918380 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1022 364 306 80 9 chr13 57365932 57366001 -62918311 - B3 SINE B2 -146 70 2 5 1022 2675 171 0 20 chr13 57366017 57366476 -62917836 + L1_Mur3 LINE L1 4640 5089 -791 5 1022 505 168 61 9 chr13 57366476 57366590 -62917722 + Lx7 LINE L1 6896 7015 -681 5 1022 1161 255 224 56 chr13 57366684 57367273 -62917039 + RMER13A LTR ERVK 98 785 -75 5 1022 2064 203 94 114 chr13 57367287 57367685 -62916627 + Lx7 LINE L1 7010 7387 -309 5 1022 396 103 0 0 chr13 57367685 57367743 -62916569 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1022 2064 203 94 114 chr13 57367743 57368045 -62916267 + Lx7 LINE L1 7388 7696 0 5 1022 3111 17 3 0 chr13 57368360 57368705 -62915607 - ORR1A0 LTR MaLR 0 346 1 5 1022 1212 109 11 6 chr13 57369881 57370056 -62914256 + B2_Mm1t SINE B2 4 179 -14 5 1022 452 55 0 0 chr13 57370084 57370139 -62914173 + B2_Mm2 SINE B2 47 101 -94 5 1022 823 198 87 11 chr13 57370262 57370446 -62913866 - B3A SINE B2 0 198 1 5 1022 319 286 128 51 chr13 57372010 57372283 -62912029 + L1ME3A LINE L1 428 721 -5521 5 1022 699 314 104 20 chr13 57372718 57373072 -62911240 + L1ME3A LINE L1 2784 3167 -2979 5 1022 297 293 50 0 chr13 57373783 57373882 -62910430 + L1ME3A LINE L1 3538 3641 -2505 5 1022 483 82 0 0 chr13 57374202 57374275 -62910037 + (TC)n Simple_repeat Simple_repeat 2 74 0 5 1022 362 289 113 70 chr13 57374706 57374963 -62909349 + L1ME3A LINE L1 4451 4718 -1428 5 1022 885 279 108 33 chr13 57375107 57375479 -62908833 + Lx8 LINE L1 5358 5793 -498 5 1022 279 247 88 47 chr13 57375525 57375682 -62908630 + Lx8 LINE L1 5776 5930 -370 5 1022 645 209 3 3 chr13 57375714 57376071 -62908241 + (CA)n Simple_repeat Simple_repeat 1 357 0 5 1022 203 362 14 14 chr13 57376311 57376381 -62907931 + MIR SINE MIR 3 72 -190 5 1022 670 262 36 25 chr13 57376492 57376688 -62907624 + B3A SINE B2 1 198 0 5 1022 359 358 190 14 chr13 57376900 57377459 -62906853 + L1ME3A LINE L1 5418 6074 -99 5 1022 301 331 89 25 chr13 57377625 57377783 -62906529 + B3 SINE B2 42 209 -7 5 1022 866 251 6 55 chr13 57378452 57378681 -62905631 - Lx6 LINE L1 -747 6713 6299 5 1022 621 272 84 27 chr13 57378802 57379063 -62905249 + Lx7 LINE L1 7047 7322 -374 5 1022 857 210 76 10 chr13 57379753 57379950 -62904362 - B3 SINE B2 -5 211 2 5 1022 571 227 274 4 chr13 57380380 57380606 -62903706 - B4A SINE B4 -2 290 4 5 1022 234 289 58 26 chr13 57380618 57380774 -62903538 + L1MA7 LINE L1 6131 6291 0 5 1022 858 91 0 0 chr13 57381607 57381728 -62902584 + (TTTC)n Simple_repeat Simple_repeat 4 124 0 5 1022 1181 68 0 0 chr13 57381759 57381906 -62902406 - B1_Mm SINE Alu 0 147 1 5 1022 232 279 69 11 chr13 57382079 57382166 -62902146 - B3 SINE B2 -12 204 113 5 1022 799 302 42 23 chr13 57382136 57382400 -62901912 - B4A SINE B4 -21 271 3 5 1022 245 135 19 0 chr13 57382715 57382767 -62901545 + (TG)n Simple_repeat Simple_repeat 2 54 0 5 1022 398 328 81 70 chr13 57383772 57384057 -62900255 + MLT1A1 LTR MaLR 20 307 -101 5 1022 441 36 0 0 chr13 57384683 57384738 -62899574 + (TC)n Simple_repeat Simple_repeat 2 56 0 5 1022 342 0 0 0 chr13 57384738 57384775 -62899537 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1022 1324 308 97 55 chr13 57385349 57386538 -62897774 - L1MA4 LINE L1 -382 5918 4671 5 1022 2020 171 22 75 chr13 57386538 57386954 -62897358 + ORR1B1 LTR MaLR 1 394 0 5 1022 1324 306 67 36 chr13 57386954 57387215 -62897097 - L1MA4 LINE L1 -1473 4670 4402 5 1022 772 235 60 5 chr13 57387302 57387486 -62896826 - B3A SINE B2 -3 195 2 5 1022 1549 57 0 5 chr13 57388609 57388804 -62895508 + B2_Mm2 SINE B2 2 195 0 5 1022 536 317 44 11 chr13 57388839 57389021 -62895291 + B3A SINE B2 10 197 -1 5 1022 252 0 0 0 chr13 57389135 57389163 -62895149 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 5 1022 282 221 103 21 chr13 57389171 57389268 -62895044 + L1M6 LINE L1 965 1069 -5427 5 1022 27 0 0 0 chr13 57389432 57389459 -62894853 + AT_rich Low_complexity Low_complexity 1 27 0 5 1022 829 219 50 64 chr13 57389459 57389678 -62894634 + B3 SINE B2 1 216 0 5 1022 1904 83 79 118 chr13 57390169 57390509 -62893803 + ORR1A2 LTR MaLR 1 327 0 5 1022 217 280 0 0 chr13 57391442 57391492 -62892820 + MIRc SINE MIR 76 125 -143 6 1022 532 162 76 0 chr13 57392401 57392506 -62891806 - B1_Mur4 SINE Alu 0 150 38 6 1022 908 230 50 0 chr13 57392703 57392903 -62891409 - B3 SINE B2 -6 210 1 6 1022 545 319 181 17 chr13 57394345 57394693 -62889619 - MER47B DNA MER2_type -13 405 1 6 1022 269 253 24 24 chr13 57394978 57395063 -62889249 - L1_Mur2 LINE L1 -3664 2213 2129 6 1022 649 122 47 0 chr13 57395138 57395245 -62889067 + RMER6B LTR ERVK 1 112 -349 6 1022 2468 113 98 26 chr13 57395245 57395673 -62888639 + RMER6B LTR ERVK 1 459 -2 6 1022 1031 271 89 88 chr13 57395835 57396297 -62888015 - L1_Rod LINE L1 -3930 1917 1450 6 1022 351 0 0 0 chr13 57396297 57396336 -62887976 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1022 1031 271 89 88 chr13 57396336 57396580 -62887732 - L1_Rod LINE L1 -4398 1449 1211 6 1022 324 0 0 0 chr13 57396587 57396623 -62887689 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1022 252 247 25 25 chr13 57396638 57396717 -62887595 - L1_Rod LINE L1 -6527 1081 1003 6 1022 207 0 0 0 chr13 57396738 57396761 -62887551 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 1022 309 312 77 14 chr13 57397748 57397891 -62886421 + MIR SINE MIR 87 238 -24 6 1022 652 199 141 5 chr13 57398385 57398577 -62885735 - ORR1D2 LTR MaLR -2 368 151 6 1022 450 0 0 0 chr13 57398580 57398630 -62885682 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1022 4747 192 86 63 chr13 57398642 57398677 -62885635 - Lx6 LINE L1 -644 6816 6781 6 1022 2307 138 50 55 chr13 57398677 57398821 -62885491 - RLTR9B2 LTR ERVK 0 420 265 6 1022 207 0 0 0 chr13 57398821 57398844 -62885468 + (C)n Simple_repeat Simple_repeat 1 23 0 6 1022 2307 138 50 55 chr13 57398844 57399121 -62885191 - RLTR9B2 LTR ERVK -156 264 3 6 1022 4747 192 86 63 chr13 57399121 57400288 -62884024 - Lx6 LINE L1 -680 6780 5587 6 1022 1748 132 23 47 chr13 57400308 57400650 -62883662 - RLTR15 LTR ERVK 0 359 26 6 1022 19575 169 55 29 chr13 57400659 57402848 -62881464 - Lx6 LINE L1 -311 5569 3320 6 1022 336 24 0 0 chr13 57402848 57402889 -62881423 + (TTTG)n Simple_repeat Simple_repeat 1 41 0 6 1022 19575 169 55 29 chr13 57402889 57403182 -62881130 - Lx6 LINE L1 -2561 3319 3012 6 1022 522 0 0 0 chr13 57403182 57403240 -62881072 + (TAGA)n Simple_repeat Simple_repeat 2 59 0 6 1022 19575 169 55 29 chr13 57403240 57404124 -62880188 - Lx6 LINE L1 -2869 3011 2080 6 1022 414 0 0 0 chr13 57404124 57404170 -62880142 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1022 19575 169 55 29 chr13 57404170 57404914 -62879398 - Lx6 LINE L1 -3801 2079 1355 6 1022 4052 201 67 108 chr13 57404901 57406191 -62878121 + Lx6 LINE L1 108 1344 -6384 6 1022 228 233 192 0 chr13 57406202 57406275 -62878037 - Lx6 LINE L1 -7097 631 545 6 1022 2442 141 58 5 chr13 57406370 57406770 -62877542 - MTC LTR MaLR 0 421 1 6 1022 188 304 70 54 chr13 57408018 57408171 -62876141 + MIR SINE MIR 13 175 -33 6 1022 857 251 142 55 chr13 57408184 57408530 -62875782 - MTE2b LTR MaLR -1 378 3 6 1022 3251 102 4 41 chr13 57408776 57409269 -62875043 - MT2C_Mm LTR ERVL 0 475 1 6 1023 1366 242 55 38 chr13 57410320 57410724 -62873588 + MTD LTR MaLR 7 408 -11 6 1023 419 292 58 0 chr13 57411122 57411242 -62873070 + B3 SINE B2 80 206 -10 6 1023 225 287 35 44 chr13 57411832 57411945 -62872367 + L1M5 LINE L1 5198 5309 -837 6 1023 569 290 58 37 chr13 57412458 57412648 -62871664 - B3A SINE B2 -4 194 1 6 1023 508 214 32 70 chr13 57412785 57412941 -62871371 - Lx8 LINE L1 -433 7040 6891 6 1023 204 97 0 0 chr13 57413562 57413593 -62870719 + (CATA)n Simple_repeat Simple_repeat 4 34 0 6 1023 363 252 0 0 chr13 57413634 57413793 -62870519 + (CA)n Simple_repeat Simple_repeat 2 160 0 6 1023 396 200 0 0 chr13 57413886 57413981 -62870331 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 1023 228 256 0 0 chr13 57414025 57414111 -62870201 + (CA)n Simple_repeat Simple_repeat 1 86 0 6 1023 203 250 0 0 chr13 57414121 57414161 -62870151 + (CATG)n Simple_repeat Simple_repeat 3 42 0 6 1023 22 0 0 0 chr13 57414974 57414996 -62869316 + GC_rich Low_complexity Low_complexity 1 22 0 6 1023 681 103 0 0 chr13 57415005 57415122 -62869190 + (GA)n Simple_repeat Simple_repeat 2 118 0 6 1023 215 280 0 0 chr13 57415555 57415605 -62868707 + G-rich Low_complexity Low_complexity 5 54 0 6 1023 239 153 0 63 chr13 57416435 57416498 -62867814 + (GTGTG)n Simple_repeat Simple_repeat 4 62 0 6 1023 727 82 48 39 chr13 57416499 57416854 -62867458 + (TG)n Simple_repeat Simple_repeat 1 357 0 6 1023 265 133 39 39 chr13 57416908 57417010 -62867302 + (TG)n Simple_repeat Simple_repeat 1 102 0 6 1023 388 237 14 14 chr13 57418293 57418434 -62865878 + CT-rich Low_complexity Low_complexity 1 141 0 6 1023 367 286 20 0 chr13 57419558 57419656 -62864656 + B3A SINE B2 1 100 -98 6 1023 1447 243 22 16 chr13 57419657 57420025 -62864287 - ORR1D2 LTR MaLR 0 370 1 6 1023 1009 177 128 13 chr13 57420044 57420279 -62864033 - ORR1D2-int LTR MaLR -2 1368 1107 6 1023 390 42 0 0 chr13 57421384 57421432 -62862880 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1023 273 98 0 0 chr13 57422727 57422768 -62861544 + (ATTG)n Simple_repeat Simple_repeat 4 44 0 6 1023 711 200 0 22 chr13 57422768 57422906 -62861406 - B1_Mur3 SINE Alu -14 135 1 6 1023 801 253 18 4 chr13 57422906 57423132 -62861180 - L1MC3 LINE L1 -172 7788 7560 6 1023 1025 315 133 61 chr13 57423213 57423307 -62861005 - L1MC3 LINE L1 -520 7440 7341 6 1023 1813 152 160 40 chr13 57423307 57423683 -62860629 + MTC LTR MaLR 1 421 0 6 1023 1025 318 127 57 chr13 57423683 57425640 -62858672 - L1MC3 LINE L1 -620 7340 5242 6 1023 846 307 27 52 chr13 57425732 57426062 -62858250 + MTE2a LTR MaLR 58 379 0 6 1023 1148 304 80 40 chr13 57426062 57426661 -62857651 - L1MC3 LINE L1 -1076 5245 4623 6 1023 378 0 0 0 chr13 57427117 57427159 -62857153 + (T)n Simple_repeat Simple_repeat 1 42 0 6 1023 262 329 88 12 chr13 57427573 57427733 -62856579 - L1MC3 LINE L1 -6320 188 17 6 1023 613 237 0 30 chr13 57428039 57428174 -62856138 - B1_Mur2 SINE Alu -1 148 18 6 1023 510 17 0 0 chr13 57428176 57428235 -62856077 + (TC)n Simple_repeat Simple_repeat 1 59 0 6 1023 282 217 0 0 chr13 57428732 57428801 -62855511 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 1023 358 216 11 33 chr13 57428843 57428934 -62855378 + B1_Mur1 SINE Alu 54 142 -7 6 1023 2978 201 55 43 chr13 57428952 57429757 -62854555 + RMER1B Other Other 147 1052 -14 6 1023 625 172 0 11 chr13 57430050 57430232 -62854080 + CT-rich Low_complexity Low_complexity 1 180 0 6 1023 183 146 0 0 chr13 57430236 57430277 -62854035 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 1023 636 268 70 26 chr13 57430473 57430703 -62853609 - L1MC1 LINE L1 -187 6146 5907 6 1023 204 158 53 0 chr13 57430955 57431012 -62853300 + CT-rich Low_complexity Low_complexity 1 60 0 6 1023 342 67 0 0 chr13 57431041 57431086 -62853226 + (TAGTG)n Simple_repeat Simple_repeat 4 48 0 6 1023 655 279 98 13 chr13 57431086 57431313 -62852999 - B4A SINE B4 -9 283 36 6 1023 397 49 12 47 chr13 57432346 57432431 -62851881 + (TTTTG)n Simple_repeat Simple_repeat 1 82 0 6 1023 226 246 60 30 chr13 57432809 57432876 -62851436 + MIRb SINE MIR 119 187 -81 6 1023 193 324 27 13 chr13 57433777 57433852 -62850460 + MIRb SINE MIR 34 109 -159 6 1023 501 71 0 0 chr13 57434807 57434877 -62849435 + (TG)n Simple_repeat Simple_repeat 1 70 0 6 1023 410 172 10 0 chr13 57434877 57434976 -62849336 + GA-rich Low_complexity Low_complexity 2 101 0 6 1023 1730 165 29 21 chr13 57435626 57436004 -62848308 + RMER6A LTR ERVK 57 437 -319 6 1023 2287 148 17 0 chr13 57435975 57436388 -62847924 + RMER6A LTR ERVK 314 733 -23 6 1023 367 226 24 0 chr13 57436548 57436632 -62847680 + ID_B1 SINE B4 118 203 -21 6 1023 219 36 0 0 chr13 57437262 57437290 -62847022 + (TC)n Simple_repeat Simple_repeat 1 28 0 6 1023 809 158 70 106 chr13 57437290 57437517 -62846795 - RMER1B Other Other 0 1066 848 6 1023 678 182 28 7 chr13 57437526 57437670 -62846642 - RMER1B Other Other -349 717 571 6 1023 347 273 0 0 chr13 57437659 57437736 -62846576 + RMER1B Other Other 366 442 -624 6 1023 257 232 18 0 chr13 57438627 57438683 -62845629 + CT-rich Low_complexity Low_complexity 1 57 0 6 1023 2115 106 3 9 chr13 57438700 57439023 -62845289 + ORR1A2 LTR MaLR 7 327 0 6 1023 198 91 0 0 chr13 57440092 57440125 -62844187 + (A)n Simple_repeat Simple_repeat 1 33 0 6 1023 266 273 0 15 chr13 57440800 57440867 -62843445 + ID4_ SINE ID 15 80 -3 6 1023 598 271 70 6 chr13 57441468 57441639 -62842673 + B3A SINE B2 1 182 -16 6 1023 228 200 0 0 chr13 57441668 57441718 -62842594 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1023 551 118 9 56 chr13 57441844 57441952 -62842360 - Lx4A LINE L1 -2 7056 6954 6 1023 2086 134 3 0 chr13 57442142 57442456 -62841856 - L1_Mur2 LINE L1 -632 5245 4931 6 1023 7981 86 12 1 chr13 57442455 57443781 -62840531 + L1_Mus4 LINE L1 5267 6609 -27 6 1023 333 0 0 0 chr13 57443787 57443824 -62840488 + (TAA)n Simple_repeat Simple_repeat 3 39 0 6 1023 741 264 28 33 chr13 57444096 57444311 -62840001 - B3 SINE B2 -2 214 1 6 1023 423 0 0 0 chr13 57445500 57445547 -62838765 + (TAA)n Simple_repeat Simple_repeat 1 47 0 6 1023 1291 268 69 6 chr13 57446464 57446798 -62837514 + ORR1D2 LTR MaLR 16 370 0 6 1023 350 192 41 0 chr13 57447004 57447077 -62837235 - PB1D10 SINE Alu -7 110 35 6 1023 2135 179 147 12 chr13 57447106 57447195 -62837117 - RLTR20A2 LTR ERVK -7 571 473 6 1023 453 19 0 0 chr13 57447195 57447249 -62837063 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1023 2135 179 147 12 chr13 57447249 57447662 -62836650 - RLTR20A2 LTR ERVK -106 472 3 6 1023 512 101 18 35 chr13 57447851 57447964 -62836348 + (CCCTAA)n Simple_repeat Simple_repeat 4 114 0 6 1023 313 318 104 28 chr13 57448041 57448290 -62836022 - Lx8 LINE L1 -9 7464 7197 6 1023 627 249 105 15 chr13 57448287 57448487 -62835825 - Lx8 LINE L1 -589 6884 6667 6 1023 240 35 0 0 chr13 57448513 57448542 -62835770 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 1023 1053 89 0 0 chr13 57448543 57448678 -62835634 - B1_Mus1 SINE Alu -13 135 1 6 1023 1055 211 29 9 chr13 57448863 57449073 -62835239 + B3 SINE B2 3 216 0 6 1023 858 235 25 0 chr13 57449422 57449622 -62834690 + B3 SINE B2 1 205 -11 6 1023 491 304 125 63 chr13 57449639 57449958 -62834354 + ORR1E LTR MaLR 19 357 -2 6 1023 279 0 0 0 chr13 57449970 57450001 -62834311 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1023 2248 136 6 11 chr13 57450029 57450394 -62833918 + ORR1C1 LTR MaLR 4 366 -12 6 1023 331 301 107 18 chr13 57450508 57450677 -62833635 + Charlie4 DNA MER1_type 13 196 -1765 6 1023 252 0 0 0 chr13 57450775 57450803 -62833509 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 1023 244 196 0 0 chr13 57450846 57450897 -62833415 - B1F1 SINE Alu -94 55 5 6 1023 311 283 40 10 chr13 57450955 57451055 -62833257 + Charlie4 DNA MER1_type 1845 1947 -14 6 1023 249 346 10 0 chr13 57451061 57451165 -62833147 + PB1D10 SINE Alu 1 105 -12 6 1023 186 43 0 0 chr13 57451731 57451754 -62832558 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1023 575 270 129 12 chr13 57451794 57452049 -62832263 - B4A SINE B4 -3 289 5 7 1023 1493 158 14 41 chr13 57452198 57452524 -62831788 - ORR1B2 LTR MaLR -8 359 1 7 1023 409 335 87 44 chr13 57453342 57453617 -62830695 - MER82 DNA MER2_type -7 646 360 7 1023 2559 47 0 50 chr13 57453903 57454242 -62830070 - RLTRETN_Mm LTR ERVK 0 322 1 7 1023 267 152 0 0 chr13 57454900 57454946 -62829366 + (TTG)n Simple_repeat Simple_repeat 3 48 0 7 1023 237 65 0 0 chr13 57455379 57455410 -62828902 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1023 987 307 42 22 chr13 57455944 57456350 -62827962 - RCHARR1 DNA MER1_type -559 415 2 7 1023 246 226 0 31 chr13 57456566 57456630 -62827682 + CT-rich Low_complexity Low_complexity 2 63 0 7 1023 1146 167 147 88 chr13 57457115 57457502 -62826810 - RMER17C LTR ERVK 0 410 1 7 1023 247 229 0 0 chr13 57459489 57459537 -62824775 + MIR SINE MIR 72 119 -143 7 1023 1372 70 32 0 chr13 57460137 57460324 -62823988 + B2_Mm2 SINE B2 2 194 -1 7 1023 1352 116 16 0 chr13 57460658 57460848 -62823464 + B2_Mm2 SINE B2 2 194 -1 7 1023 3432 31 10 0 chr13 57461941 57462333 -62821979 + MTA_Mm LTR MaLR 1 396 0 7 1023 720 262 94 16 chr13 57462673 57462929 -62821383 - RMER5 LTR ERV1 -225 309 34 7 1023 1270 271 45 55 chr13 57463503 57463975 -62820337 + RMER5 LTR ERV1 1 467 -67 7 1023 456 230 0 0 chr13 57465581 57465668 -62818644 + B3A SINE B2 1 87 -111 7 1023 333 248 0 0 chr13 57465862 57465975 -62818337 + (TG)n Simple_repeat Simple_repeat 2 114 0 7 1023 524 254 0 6 chr13 57466014 57466192 -62818120 + (TG)n Simple_repeat Simple_repeat 2 178 0 7 1023 294 125 0 0 chr13 57467055 57467103 -62817209 + (TC)n Simple_repeat Simple_repeat 2 49 0 7 1023 1340 251 64 12 chr13 57467361 57467707 -62816605 - Lx6 LINE L1 -48 7412 7049 7 1023 890 202 56 25 chr13 57468147 57468381 -62815931 + ORR1D1 LTR MaLR 1 308 -66 7 1023 216 200 0 0 chr13 57470346 57470401 -62813911 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 1023 617 281 72 61 chr13 57470401 57470678 -62813634 - B4A SINE B4 0 292 13 7 1023 315 0 0 0 chr13 57471479 57471514 -62812798 + (TG)n Simple_repeat Simple_repeat 1 35 0 7 1023 3676 131 19 12 chr13 57471820 57472416 -62811896 + Lx4B LINE L1 6440 7039 -19 7 1023 324 0 0 0 chr13 57472416 57472452 -62811860 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 7 1023 718 224 73 0 chr13 57472987 57473166 -62811146 - B3A SINE B2 -6 192 1 7 1023 1918 212 86 16 chr13 57474242 57474741 -62809571 + RMER5 LTR ERV1 1 534 0 7 1023 1227 206 215 0 chr13 57475287 57475603 -62808709 - ORR1C2 LTR MaLR 0 384 1 7 1023 23 0 0 0 chr13 57476061 57476084 -62808228 + AT_rich Low_complexity Low_complexity 1 23 0 7 1023 526 184 22 22 chr13 57476327 57476505 -62807807 + CT-rich Low_complexity Low_complexity 3 180 0 7 1023 195 162 0 0 chr13 57476967 57477004 -62807308 + GA-rich Low_complexity Low_complexity 3 39 0 7 1023 545 175 42 12 chr13 57477011 57477348 -62806964 + (CAGAGA)n Simple_repeat Simple_repeat 1 347 0 7 1023 16632 55 1 0 chr13 57478830 57481575 -62802737 - L1Md_F2 LINE L1 0 6582 3836 7 1023 1590 37 0 25 chr13 57482157 57482353 -62801959 + B2_Mm1t SINE B2 2 192 -1 7 1023 318 194 0 0 chr13 57482470 57482537 -62801775 + (TA)n Simple_repeat Simple_repeat 2 68 0 7 1023 2258 164 74 54 chr13 57483316 57483819 -62800493 + RMER5 LTR ERV1 17 529 -5 7 1023 989 123 6 16 chr13 57483851 57484033 -62800279 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1023 314 192 51 13 chr13 57484112 57484191 -62800121 - Lx9 LINE L1 -180 7464 7383 7 1023 302 309 5 69 chr13 57484852 57485040 -62799272 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 7 1023 319 261 33 0 chr13 57486022 57486114 -62798198 - L1MC LINE L1 -2073 5809 5715 7 1023 202 325 129 26 chr13 57486385 57486540 -62797772 - MIRc SINE MIR -49 219 49 7 1023 303 302 0 0 chr13 57487277 57487396 -62796916 + CT-rich Low_complexity Low_complexity 5 123 0 7 1023 182 105 26 0 chr13 57487435 57487473 -62796839 + (CTTA)n Simple_repeat Simple_repeat 2 40 0 7 1023 1494 204 60 12 chr13 57487478 57487586 -62796726 - ORR1D1 LTR MaLR -25 349 244 7 1023 258 32 0 0 chr13 57487586 57487617 -62796695 + (CAGG)n Simple_repeat Simple_repeat 4 34 0 7 1023 1494 204 60 12 chr13 57487617 57487841 -62796471 - ORR1D1 LTR MaLR -131 243 3 7 1023 1921 232 49 52 chr13 57490607 57491262 -62793050 - RLTR40 LTR ERVK -56 761 109 7 1023 652 224 169 12 chr13 57491271 57491443 -62792869 + B3 SINE B2 1 199 -17 7 1023 288 271 50 40 chr13 57492118 57492158 -62792154 - PB1D10 SINE Alu -12 105 67 7 1023 972 0 0 0 chr13 57492158 57492266 -62792046 + (TC)n Simple_repeat Simple_repeat 1 108 0 7 1023 225 0 0 0 chr13 57492266 57492290 -62792022 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1023 288 271 50 40 chr13 57492290 57492348 -62791964 - PB1D10 SINE Alu -51 66 6 7 1023 351 0 0 0 chr13 57492770 57492809 -62791503 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1023 746 31 0 10 chr13 57493261 57493359 -62790953 + B1_Mm SINE Alu 50 146 -1 7 1023 251 327 0 9 chr13 57493476 57493581 -62790731 + L1M4 LINE L1 3729 3832 -2314 7 1023 348 94 0 0 chr13 57493802 57493855 -62790457 + (GAAAA)n Simple_repeat Simple_repeat 2 54 0 7 1023 319 352 28 7 chr13 57494661 57494804 -62789508 + MLT1B LTR MaLR 229 374 -16 7 1023 2734 80 49 156 chr13 57497181 57497713 -62786599 - MT2C_Mm LTR ERVL 0 475 1 7 1023 285 281 79 0 chr13 57498310 57498424 -62785888 + L2a LINE L2 3193 3315 -111 7 1023 342 194 0 0 chr13 57498442 57498514 -62785798 + (TG)n Simple_repeat Simple_repeat 1 72 0 7 1023 798 298 85 12 chr13 57498553 57498801 -62785511 - B4 SINE B4 -13 279 14 7 1023 245 258 30 0 chr13 57499203 57499269 -62785043 + GA-rich Low_complexity Low_complexity 4 71 0 7 1023 464 259 37 31 chr13 57499271 57499434 -62784878 - MER92B LTR ERV1 -472 164 1 7 1023 185 0 40 0 chr13 57499461 57499486 -62784826 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1023 2723 232 63 36 chr13 57500064 57500984 -62783328 + L1_Rod LINE L1 2642 3586 -2261 1 1023 442 280 0 0 chr13 57500985 57501103 -62783209 + L1M2 LINE L1 4434 4551 -1592 2 1023 668 240 0 6 chr13 57501189 57501369 -62782943 + GA-rich Low_complexity Low_complexity 1 179 0 3 1023 3078 290 97 44 chr13 57501369 57502000 -62782312 + Lx9 LINE L1 5546 6402 -1242 4 1023 243 0 0 0 chr13 57502000 57502027 -62782285 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1023 3078 274 109 31 chr13 57502027 57503054 -62781258 + Lx9 LINE L1 6403 7499 -145 4 1023 183 42 0 0 chr13 57503054 57503078 -62781234 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 1023 375 312 74 48 chr13 57503080 57503349 -62780963 - MER89-int LTR ERV1 -3805 2996 2721 7 1023 341 328 103 0 chr13 57504139 57504343 -62779969 - MER89-int LTR ERV1 -4775 2026 1802 7 1023 183 146 0 0 chr13 57504520 57504561 -62779751 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 1023 281 340 84 7 chr13 57505098 57505252 -62779060 - MER89-int LTR ERV1 -5766 1035 870 7 1023 451 306 150 46 chr13 57505439 57505833 -62778479 - MER89-int LTR ERV1 -6074 727 293 7 1023 479 261 62 0 chr13 57505873 57506003 -62778309 - B3A SINE B2 -59 139 2 9 1023 2576 133 15 10 chr13 57506003 57506406 -62777906 - MTB_Mm LTR MaLR 0 407 3 1 1023 396 0 0 0 chr13 57506913 57506957 -62777355 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1023 405 247 0 0 chr13 57506957 57507038 -62777274 - B3A SINE B2 -50 148 68 1 1023 516 262 8 32 chr13 57507589 57507715 -62776597 - RSINE1 SINE B4 -32 133 11 1 1023 459 0 0 0 chr13 57508009 57508060 -62776252 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1023 383 324 91 51 chr13 57508103 57508365 -62775947 - L1MEe LINE L1 -2669 3477 3209 1 1023 1595 306 85 33 chr13 57508375 57508804 -62775508 - L1MA4A LINE L1 -1397 6247 5775 1 1023 2568 71 6 0 chr13 57508804 57509129 -62775183 + ORR1A2 LTR MaLR 1 327 0 1 1023 1595 307 127 55 chr13 57509129 57510578 -62773734 - L1MA4A LINE L1 -106 5774 4216 1 1023 183 372 13 0 chr13 57511066 57511144 -62773168 + L2a LINE L2 3334 3412 -14 1 1023 657 327 41 67 chr13 57511711 57512098 -62772214 - MT2A LTR ERVL -156 377 1 1 1023 353 289 112 76 chr13 57512099 57512376 -62771936 - L1MEe LINE L1 -3845 2321 2035 1 1023 236 211 13 0 chr13 57512395 57512471 -62771841 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1023 922 179 45 28 chr13 57512540 57512718 -62771594 - B2_Mm2 SINE B2 -14 181 1 2 1023 262 315 94 13 chr13 57512798 57513033 -62771279 - L1MEe LINE L1 -4356 1810 1557 1 1023 200 319 0 14 chr13 57513143 57513216 -62771096 + MER5A DNA MER1_type 22 93 -96 2 1023 348 353 34 40 chr13 57513430 57513607 -62770705 - L1MEe LINE L1 -4888 1248 1073 1 1023 357 337 91 53 chr13 57513844 57514107 -62770205 - B4 SINE B4 -18 274 2 2 1023 737 277 129 4 chr13 57515787 57516059 -62768253 + Lx8 LINE L1 6955 7260 -213 2 1023 42 20 0 0 chr13 57516092 57516141 -62768171 + AT_rich Low_complexity Low_complexity 1 49 0 2 1023 887 219 52 10 chr13 57516155 57516349 -62767963 + B3 SINE B2 3 204 -12 2 1023 200 240 40 13 chr13 57516474 57516550 -62767762 + CT-rich Low_complexity Low_complexity 2 79 0 2 1023 222 205 0 0 chr13 57516684 57516723 -62767589 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1023 572 312 119 2 chr13 57516740 57517135 -62767177 - L1MB3 LINE L1 -119 6064 5624 2 1023 812 317 142 33 chr13 57517892 57518800 -62765512 - L1MB3 LINE L1 -853 5287 4281 2 1023 659 261 110 17 chr13 57519024 57519248 -62765064 - Lx5 LINE L1 -4 7054 6795 3 1023 462 291 50 47 chr13 57519246 57519524 -62764788 - L1MB3 LINE L1 -2121 4019 3752 2 1023 783 240 104 0 chr13 57519631 57519823 -62764489 - B3 SINE B2 0 216 5 3 1023 389 301 33 47 chr13 57519825 57520038 -62764274 - L1MB3 LINE L1 -2578 3562 3353 2 1023 5900 156 52 22 chr13 57520050 57521146 -62763166 + MTC-int LTR MaLR 130 1258 0 3 1023 2231 148 52 27 chr13 57521146 57521549 -62762763 + MTC LTR MaLR 1 413 -8 3 1023 1068 290 111 72 chr13 57521591 57522623 -62761689 - L1MB3 LINE L1 -2859 3287 2215 2 1023 4154 321 91 30 chr13 57522957 57523524 -62760788 + Tigger7 DNA MER2_type 359 956 -1535 3 1023 1061 227 35 0 chr13 57523524 57523727 -62760585 + B3 SINE B2 1 210 -6 3 1023 4154 321 91 30 chr13 57523727 57525165 -62759147 + Tigger7 DNA MER2_type 957 2487 -4 3 1023 183 349 83 45 chr13 57525166 57525298 -62759014 - L2 LINE L2 -536 2883 2747 3 1023 330 289 24 0 chr13 57525322 57525430 -62758882 + PB1D10 SINE Alu 1 117 -32 3 1023 300 183 66 45 chr13 57525709 57525802 -62758510 - B1F SINE Alu -55 94 7 3 1023 200 216 20 0 chr13 57525863 57525914 -62758398 + C-rich Low_complexity Low_complexity 1 52 0 3 1023 367 301 93 73 chr13 57526066 57526313 -62757999 - L1MC4a LINE L1 -2010 5872 5621 3 1023 1354 179 255 0 chr13 57531030 57531359 -62752953 + MTD LTR MaLR 7 419 0 4 1023 232 293 66 13 chr13 57532180 57532256 -62752056 + MTEa LTR MaLR 1 80 -299 4 1023 184 283 113 0 chr13 57533159 57533212 -62751100 + MER5A DNA MER1_type 7 65 -124 4 1023 782 194 6 19 chr13 57533320 57533478 -62750834 - B3 SINE B2 -33 183 28 4 1023 582 192 67 0 chr13 57534581 57534685 -62749627 - B1F2 SINE Alu -8 141 31 4 1023 897 196 108 0 chr13 57535260 57535454 -62748858 - B3 SINE B2 -1 215 1 4 1024 612 205 25 62 chr13 57542045 57542206 -62742106 - RLTR11B LTR ERVK -22 431 277 4 1024 272 339 26 26 chr13 57542216 57542331 -62741981 - RLTR11B LTR ERVK -138 315 201 4 1024 289 145 0 31 chr13 57542334 57542398 -62741914 + CT-rich Low_complexity Low_complexity 1 62 0 4 1024 1088 198 15 63 chr13 57542401 57542670 -62741642 - RLTR11B LTR ERVK -196 257 2 4 1024 299 333 16 0 chr13 57544724 57544847 -62739465 - PB1 SINE Alu -2 125 1 4 1024 188 361 139 0 chr13 57547208 57547316 -62736996 + MIR SINE MIR 30 152 -110 5 1024 208 158 0 26 chr13 57548976 57549015 -62735297 + CT-rich Low_complexity Low_complexity 4 41 0 5 1024 190 321 119 21 chr13 57550082 57550225 -62734087 + L2b LINE L2 3214 3370 -5 5 1024 252 0 0 0 chr13 57552303 57552331 -62731981 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5 1024 21 0 0 0 chr13 57553053 57553074 -62731238 + AT_rich Low_complexity Low_complexity 1 21 0 5 1024 1093 65 0 0 chr13 57553077 57553216 -62731096 - B1_Mus1 SINE Alu 0 148 10 5 1024 186 71 0 0 chr13 57553574 57553602 -62730710 + (TAAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1024 318 50 0 0 chr13 57555313 57555353 -62728959 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 5 1024 749 161 17 22 chr13 57555361 57555539 -62728773 + GA-rich Low_complexity Low_complexity 1 177 0 5 1024 294 310 57 26 chr13 57556604 57556796 -62727516 + L1M7 LINE L1 1351 1548 -4763 5 1024 257 287 20 58 chr13 57557181 57557330 -62726982 + L1M7 LINE L1 2196 2337 -3878 5 1024 780 242 91 20 chr13 57557616 57557814 -62726498 + B3 SINE B2 5 216 0 6 1024 4443 246 83 33 chr13 57557887 57559151 -62725161 + Lx9 LINE L1 6173 7515 -129 6 1024 354 45 0 0 chr13 57559151 57559195 -62725117 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1024 4443 246 83 33 chr13 57559195 57559252 -62725060 + Lx9 LINE L1 7516 7563 -81 6 1024 3415 52 0 2 chr13 57559252 57559660 -62724652 - MTB_Mm LTR MaLR 0 407 1 6 1024 4443 246 83 33 chr13 57559660 57559728 -62724584 + Lx9 LINE L1 7564 7633 -11 6 1024 27 0 0 0 chr13 57559730 57559757 -62724555 + AT_rich Low_complexity Low_complexity 1 27 0 6 1024 1077 125 20 56 chr13 57559760 57559955 -62724357 + B2_Mm2 SINE B2 1 188 -7 6 1024 381 315 47 0 chr13 57562277 57562426 -62721886 - MIRb SINE MIR -6 262 107 6 1024 211 279 110 37 chr13 57562443 57562525 -62721787 - MIRb SINE MIR -19 249 162 6 1024 1859 52 0 17 chr13 57562653 57562890 -62721422 - L1_Mus3 LINE L1 -553 6085 5853 6 1024 4390 58 36 4 chr13 57562890 57563445 -62720867 + L1_Mus3 LINE L1 6051 6623 -15 6 1024 2109 193 29 12 chr13 57563525 57563934 -62720378 - MTD LTR MaLR -2 417 2 6 1024 205 262 0 0 chr13 57564067 57564109 -62720203 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1024 195 274 201 45 chr13 57564122 57564256 -62720056 - MIRb SINE MIR -72 196 42 7 1024 422 285 71 93 chr13 57564853 57565035 -62719277 - ORR1D1 LTR MaLR 0 421 199 7 1024 225 0 0 0 chr13 57565035 57565060 -62719252 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 7 1024 491 188 23 23 chr13 57565091 57565265 -62719047 + GA-rich Low_complexity Low_complexity 3 176 0 7 1024 853 211 33 22 chr13 57565266 57565450 -62718862 - ORR1D1 LTR MaLR -188 186 1 7 1024 2504 163 108 34 chr13 57565471 57566036 -62718276 + RLTR26 LTR ERVK 1 642 0 7 1024 2089 109 76 0 chr13 57567942 57568246 -62716066 + ORR1A2 LTR MaLR 1 327 0 7 1024 252 0 0 0 chr13 57568270 57568298 -62716014 + (TATG)n Simple_repeat Simple_repeat 2 29 0 7 1024 509 197 153 20 chr13 57568323 57568457 -62715855 - B3 SINE B2 -12 204 50 7 1024 1146 58 0 0 chr13 57568487 57568626 -62715686 + B1_Mus1 SINE Alu 2 140 -8 7 1024 582 323 15 30 chr13 57568647 57568848 -62715464 - B4A SINE B4 -78 214 17 8 1024 543 69 0 0 chr13 57569301 57569373 -62714939 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 8 1024 359 270 94 51 chr13 57569521 57569638 -62714674 + PB1D7 SINE Alu 6 127 0 8 1024 1027 254 26 35 chr13 57569638 57569919 -62714393 + Lx8 LINE L1 7052 7335 -138 8 1024 330 26 0 0 chr13 57569919 57569958 -62714354 + (TAA)n Simple_repeat Simple_repeat 3 41 0 8 1024 1027 254 26 35 chr13 57569958 57569986 -62714326 + Lx8 LINE L1 7336 7358 -115 8 1024 364 231 27 36 chr13 57570008 57570120 -62714192 + Lx8 LINE L1 7353 7463 -10 8 1024 465 238 20 10 chr13 57570401 57570503 -62713809 + Lx8 LINE L1 7052 7154 -319 8 1024 230 385 39 0 chr13 57570508 57570612 -62713700 + MER20 DNA MER1_type 111 218 -1 8 1024 374 308 20 40 chr13 57571224 57571471 -62712841 + L1M5 LINE L1 5254 5495 -629 8 1024 340 293 79 67 chr13 57573129 57573429 -62710883 + L1ME3B LINE L1 1960 2110 -4132 8 1024 324 354 70 14 chr13 57573708 57573923 -62710389 + L1ME3B LINE L1 5894 6120 -120 8 1024 517 200 62 18 chr13 57573989 57574101 -62710211 + RSINE1 SINE B4 2 118 -47 8 1024 24 32 0 0 chr13 57574152 57574183 -62710129 + AT_rich Low_complexity Low_complexity 1 31 0 9 1024 422 340 63 32 chr13 57574748 57574906 -62709406 + MLT1G3 LTR MaLR 247 409 -186 9 1024 352 283 93 53 chr13 57575532 57575778 -62708534 + MIRb SINE MIR 1 256 -12 9 1024 207 0 0 0 chr13 57576451 57576474 -62707838 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 9 1024 694 292 79 44 chr13 57577171 57577560 -62706752 + L1MB1 LINE L1 5624 6037 -131 9 1024 924 204 23 45 chr13 57577560 57577781 -62706531 + B3 SINE B2 1 216 0 9 1024 694 292 79 44 chr13 57577781 57577821 -62706491 + L1MB1 LINE L1 6038 6068 -100 9 1024 227 231 230 40 chr13 57578268 57578394 -62705918 - MIRc SINE MIR -118 150 1 9 1024 659 234 63 17 chr13 57578495 57578669 -62705643 + MLT2D LTR ERVL 6 187 -227 9 1024 297 281 141 0 chr13 57579069 57579190 -62705122 + L2a LINE L2 3285 3422 -4 9 1024 316 267 28 56 chr13 57579401 57579508 -62704804 + PB1D7 SINE Alu 17 120 0 9 1024 779 226 148 6 chr13 57580744 57580926 -62703386 - B3 SINE B2 -8 208 1 1 1024 233 183 0 62 chr13 57580926 57580990 -62703322 - L1M LINE L1 -902 5395 5336 1 1024 39 68 0 0 chr13 57581015 57581089 -62703223 + AT_rich Low_complexity Low_complexity 1 74 0 1 1024 2485 215 78 55 chr13 57581187 57581826 -62702486 + Lx6 LINE L1 6806 7459 -1 1 1024 487 154 0 62 chr13 57581866 57581963 -62702349 + ORR1A2 LTR MaLR 1 91 -236 1 1024 2149 102 7 10 chr13 57581961 57582292 -62702020 + ORR1A2 LTR MaLR 17 346 0 1 1024 2020 172 16 14 chr13 57582695 57583061 -62701251 + ORR1B2 LTR MaLR 1 367 0 1 1024 7323 163 56 45 chr13 57583069 57584358 -62699954 + ORR1B2-int LTR MaLR 19 1372 -137 1 1024 1252 41 0 0 chr13 57584358 57584504 -62699808 + B1_Mm SINE Alu 2 147 0 1 1024 7323 163 56 45 chr13 57584504 57584689 -62699623 + ORR1B2-int LTR MaLR 1373 1509 0 1 1024 1918 125 93 29 chr13 57584689 57585034 -62699278 + ORR1B2 LTR MaLR 1 367 0 1 1024 219 171 24 0 chr13 57585417 57585458 -62698854 + CT-rich Low_complexity Low_complexity 1 42 0 1 1024 208 398 30 61 chr13 57585614 57585745 -62698567 - MIRb SINE MIR -92 176 50 1 1024 633 61 0 0 chr13 57587111 57587193 -62697119 + (CA)n Simple_repeat Simple_repeat 2 83 0 1 1024 204 40 0 0 chr13 57589043 57589068 -62695244 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 1024 324 0 0 0 chr13 57589482 57589518 -62694794 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1024 728 243 94 44 chr13 57589534 57589809 -62694503 - B4A SINE B4 -2 290 2 1 1024 468 0 0 0 chr13 57591121 57591173 -62693139 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1024 504 278 74 65 chr13 57591596 57591935 -62692377 + L1MC3 LINE L1 4901 5242 -904 1 1024 444 118 0 0 chr13 57591978 57592046 -62692266 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1024 450 308 150 4 chr13 57592059 57592333 -62691979 + L1MC3 LINE L1 5483 5796 -1989 1 1024 2104 80 10 7 chr13 57592361 57592652 -62691660 - ORR1A2 LTR MaLR -35 292 1 1 1024 599 325 181 13 chr13 57592652 57593328 -62690984 + L1MC3 LINE L1 5827 6615 -1170 1 1024 747 87 40 17 chr13 57593593 57593769 -62690543 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 1024 450 271 91 118 chr13 57593812 57593911 -62690401 + L1MC3 LINE L1 6633 6731 -1054 1 1024 757 229 73 48 chr13 57593911 57594117 -62690195 + B3 SINE B2 1 211 -5 1 1024 450 271 91 118 chr13 57594117 57594557 -62689755 + L1MC3 LINE L1 6732 7157 -628 1 1024 547 246 34 27 chr13 57594755 57594901 -62689411 + RSINE1 SINE B4 2 148 -17 1 1024 264 294 93 22 chr13 57594958 57595097 -62689215 + L1MC3 LINE L1 7594 7742 -43 1 1024 408 271 55 80 chr13 57595402 57595657 -62688655 + MIRc SINE MIR 1 243 -25 1 1024 238 243 29 0 chr13 57595678 57595748 -62688564 + L1ME4a LINE L1 4176 4247 -1899 1 1024 341 233 11 53 chr13 57596561 57596656 -62687656 + PB1D10 SINE Alu 22 112 -5 1 1024 926 238 199 36 chr13 57597235 57597592 -62686720 + MTD LTR MaLR 5 419 0 1 1024 673 282 45 26 chr13 57597822 57598088 -62686224 + L1ME4a LINE L1 5584 5854 -270 1 1024 339 354 93 4 chr13 57599208 57599431 -62684881 - MIRb SINE MIR -3 259 22 1 1024 234 364 0 32 chr13 57603513 57603728 -62680584 + (TATATG)n Simple_repeat Simple_repeat 1 208 0 1 1024 346 389 0 0 chr13 57603710 57603914 -62680398 + (TG)n Simple_repeat Simple_repeat 1 204 0 1 1024 1121 76 0 0 chr13 57603981 57604125 -62680187 + B1_Mus1 SINE Alu 4 147 -1 1 1024 309 219 0 0 chr13 57604358 57604431 -62679881 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1024 195 282 42 0 chr13 57604514 57604585 -62679727 - L2a LINE L2 -167 3259 3186 1 1024 341 348 119 64 chr13 57604733 57605077 -62679235 - L2a LINE L2 -484 2935 2573 1 1024 192 352 46 0 chr13 57605127 57605235 -62679077 - L2a LINE L2 -944 2475 2363 1 1024 1053 116 125 17 chr13 57605397 57605573 -62678739 + B2_Mm2 SINE B2 1 195 0 1 1024 185 79 0 73 chr13 57605591 57605632 -62678680 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 1 1024 445 290 10 51 chr13 57605792 57605988 -62678324 - B3A SINE B2 -10 188 1 1 1024 245 146 21 0 chr13 57606308 57606356 -62677956 + CT-rich Low_complexity Low_complexity 3 51 0 1 1024 1302 143 18 18 chr13 57606602 57606823 -62677489 - URR1B DNA MER1_type 0 225 5 1 1024 1061 221 58 36 chr13 57607643 57607920 -62676392 + B4A SINE B4 1 283 -9 1 1024 220 318 58 12 chr13 57608517 57608532 -62675780 - BC1_Mm scRNA scRNA -62 90 36 1 1024 233 258 16 31 chr13 57608532 57608596 -62675716 - tRNA-Ala-GCY_ tRNA tRNA -9 66 4 1 1024 283 252 43 49 chr13 57611162 57611419 -62672893 + (AATAG)n Simple_repeat Simple_repeat 1 255 0 1 1024 1425 173 8 0 chr13 57611431 57611680 -62672632 - RLTR11A2 LTR ERVK 0 527 277 1 1024 1482 176 5 48 chr13 57611900 57612212 -62672100 - RLTR11A2 LTR ERVK -160 293 1 1 1024 375 205 0 101 chr13 57612223 57612391 -62671921 + (AATAG)n Simple_repeat Simple_repeat 3 153 0 1 1024 333 0 0 0 chr13 57613334 57613371 -62670941 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1024 240 270 40 13 chr13 57614567 57614642 -62669670 - MTEa LTR MaLR -13 366 290 1 1024 1490 240 78 8 chr13 57616232 57616614 -62667698 - MTD LTR MaLR -1 418 10 1 1024 629 115 0 19 chr13 57616632 57616738 -62667574 + (GGGAGA)n Simple_repeat Simple_repeat 4 107 0 1 1024 191 61 30 0 chr13 57617850 57617883 -62666429 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1024 795 268 42 5 chr13 57617938 57618129 -62666183 + B3 SINE B2 2 199 -17 1 1024 33 0 0 0 chr13 57618151 57618184 -62666128 + AT_rich Low_complexity Low_complexity 1 33 0 1 1024 209 0 98 0 chr13 57618394 57618435 -62665877 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1 1024 475 329 82 33 chr13 57620059 57620405 -62663907 + MLT1C LTR MaLR 88 463 -4 1 1024 924 201 25 36 chr13 57621857 57622053 -62662259 + B3 SINE B2 23 216 0 1 1024 21 0 0 0 chr13 57622055 57622076 -62662236 + AT_rich Low_complexity Low_complexity 1 21 0 1 1024 273 236 54 27 chr13 57622911 57622985 -62661327 - MIRb SINE MIR -92 176 101 1 1024 360 0 0 0 chr13 57623260 57623300 -62661012 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1024 465 19 0 0 chr13 57623300 57623353 -62660959 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 1024 3162 47 36 0 chr13 57624158 57624543 -62659769 - MTB LTR MaLR 0 400 2 1 1024 1888 166 132 42 chr13 57624797 57625206 -62659106 + RLTR41 LTR ERV1 1 446 0 1 1024 344 307 88 47 chr13 57627064 57627279 -62657033 + RMER10A LTR ERVL 20 243 -199 1 1024 405 235 167 70 chr13 57627563 57627778 -62656534 + RLTR41 LTR ERV1 211 446 0 1 1024 186 164 36 18 chr13 57627817 57627873 -62656439 + CT-rich Low_complexity Low_complexity 1 57 0 1 1024 2006 153 48 20 chr13 57628217 57628611 -62655701 - RMER17C LTR ERVK 0 410 6 1 1024 2326 70 3 109 chr13 57629390 57629756 -62654556 - ORR1A2 LTR MaLR 0 327 1 1 1024 291 113 0 0 chr13 57633126 57633179 -62651133 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 1 1024 277 210 0 0 chr13 57633203 57633265 -62651047 + GA-rich Low_complexity Low_complexity 2 63 0 1 1024 429 20 0 0 chr13 57633875 57633925 -62650387 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1024 486 49 0 0 chr13 57633925 57633986 -62650326 + (GGGA)n Simple_repeat Simple_repeat 1 61 0 1 1024 230 330 18 70 chr13 57634355 57634469 -62649843 + MIRb SINE MIR 121 228 -40 1 1024 225 0 0 0 chr13 57635093 57635118 -62649194 + (CCCCCA)n Simple_repeat Simple_repeat 4 28 0 1 1024 1562 337 178 56 chr13 57635482 57636962 -62647350 - MLT-int LTR MaLR -13 1722 62 1 1024 180 0 0 0 chr13 57637407 57637427 -62646885 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1024 1312 107 16 0 chr13 57637776 57637963 -62646349 + B2_Mm2 SINE B2 3 192 -3 1 1024 465 19 0 0 chr13 57639438 57639492 -62644820 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1024 212 312 108 0 chr13 57639621 57639714 -62644598 - L2 LINE L2 -623 2796 2694 1 1024 340 340 81 19 chr13 57639741 57639951 -62644361 - L2 LINE L2 -798 2621 2399 1 1024 462 18 0 0 chr13 57640833 57640888 -62643424 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1024 352 268 51 10 chr13 57641270 57641368 -62642944 - L1MCa LINE L1 -4517 1991 1890 1 1024 180 0 0 0 chr13 57642056 57642076 -62642236 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 1 1024 414 0 0 0 chr13 57642287 57642333 -62641979 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1024 527 203 37 103 chr13 57642557 57642771 -62641541 + Lx5 LINE L1 5998 6197 -853 1 1024 2491 217 38 8 chr13 57642790 57643311 -62641001 + Lx5 LINE L1 6497 7033 -17 1 1024 180 77 0 0 chr13 57643313 57643339 -62640973 + (TTAA)n Simple_repeat Simple_repeat 2 27 0 1 1024 276 258 247 0 chr13 57643377 57643466 -62640846 - MIR SINE MIR -45 217 107 1 1024 325 307 54 64 chr13 57644379 57644752 -62639560 - L1ME1 LINE L1 -4 6175 5807 1 1024 282 316 17 8 chr13 57645569 57645687 -62638625 - L1MEd LINE L1 -5452 667 549 1 1024 246 105 0 0 chr13 57645968 57646006 -62638306 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 1 1024 212 293 80 0 chr13 57646590 57646665 -62637647 + ID4_ SINE ID 3 83 0 1 1024 572 339 117 40 chr13 57648474 57648723 -62635589 + B4A SINE B4 4 271 -21 1 1024 477 127 0 0 chr13 57648757 57648836 -62635476 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 1024 256 183 21 0 chr13 57649330 57649423 -62634889 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 1 1024 291 93 0 0 chr13 57649451 57649494 -62634818 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 1 1024 316 232 29 0 chr13 57649520 57649589 -62634723 + MTD LTR MaLR 347 417 -2 1 1024 189 0 0 0 chr13 57649686 57649707 -62634605 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 1024 315 0 0 0 chr13 57649707 57649741 -62634571 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 1024 280 250 14 27 chr13 57649866 57649940 -62634372 - MTD LTR MaLR 0 419 347 1 1024 1005 9 0 0 chr13 57650019 57650133 -62634179 + (GGGAGA)n Simple_repeat Simple_repeat 5 118 0 1 1024 281 320 31 0 chr13 57650221 57650318 -62633994 + MLT1J LTR MaLR 71 170 -342 1 1024 224 122 24 0 chr13 57651003 57651044 -62633268 + (TCCCC)n Simple_repeat Simple_repeat 5 46 0 1 1024 396 0 0 0 chr13 57652935 57652979 -62631333 + (CAAGG)n Simple_repeat Simple_repeat 4 47 0 1 1024 340 247 38 25 chr13 57653267 57653346 -62630966 - MLT1A1 LTR MaLR 0 408 329 1 1024 1232 68 0 0 chr13 57653494 57653641 -62630671 - B1_Mus2 SINE Alu 0 147 1 1 1024 228 35 0 0 chr13 57653996 57654025 -62630287 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1024 385 288 174 20 chr13 57655175 57655370 -62628942 - RMER20B LTR ERVK -269 358 134 2 1024 1750 162 131 106 chr13 57656651 57657086 -62627226 + RLTR41 LTR ERV1 1 446 0 2 1024 194 228 12 81 chr13 57657270 57657356 -62626956 + L2a LINE L2 3326 3405 -21 2 1024 1896 207 55 53 chr13 57658270 57658359 -62625953 + RLTR31A_Mm LTR ERVK 1 92 -492 2 1024 324 0 0 0 chr13 57658359 57658395 -62625917 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1024 1896 207 55 53 chr13 57658395 57658815 -62625497 + RLTR31A_Mm LTR ERVK 93 511 -73 2 1024 190 314 65 19 chr13 57659646 57659753 -62624559 + MIRb SINE MIR 71 182 -86 2 1024 241 276 28 75 chr13 57660157 57660263 -62624049 + MTEb LTR MaLR 279 379 0 2 1024 246 345 61 54 chr13 57660735 57660882 -62623430 - MIR3 SINE MIR -2 206 59 2 1024 469 127 28 0 chr13 57660920 57660991 -62623321 - ORR1D1 LTR MaLR -15 359 287 2 1024 823 186 60 40 chr13 57660991 57661192 -62623120 + ORR1D1 LTR MaLR 5 209 -165 2 1024 389 129 60 0 chr13 57661192 57661308 -62623004 + (TCTA)n Simple_repeat Simple_repeat 4 126 0 2 1024 594 153 37 0 chr13 57661320 57661483 -62622829 + (TCTA)n Simple_repeat Simple_repeat 1 169 0 2 1024 791 272 24 62 chr13 57661483 57661691 -62622621 + ORR1D1 LTR MaLR 159 358 -16 2 1024 1261 181 43 26 chr13 57661703 57661936 -62622376 - ORR1D1 LTR MaLR -137 237 1 2 1024 541 184 18 9 chr13 57662780 57662890 -62621422 - Lx9 LINE L1 -202 7442 7332 2 1024 511 240 16 0 chr13 57662884 57663013 -62621299 - Lx9 LINE L1 -497 7147 7017 2 1024 350 167 274 0 chr13 57663009 57663040 -62621272 + Lx9 LINE L1 7439 7477 -167 2 1024 402 21 0 0 chr13 57663040 57663087 -62621225 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1024 350 167 274 0 chr13 57663087 57663157 -62621155 + Lx9 LINE L1 7478 7567 -77 2 1024 3183 68 8 0 chr13 57663966 57664363 -62619949 - MTB LTR MaLR 0 400 1 2 1024 546 108 0 0 chr13 57664505 57664588 -62619724 + (CA)n Simple_repeat Simple_repeat 2 84 0 2 1024 210 267 200 0 chr13 57664688 57664793 -62619519 + L2c LINE L2 3039 3164 -223 2 1024 185 359 0 0 chr13 57665237 57665301 -62619011 + L2c LINE L2 3231 3294 -81 2 1024 870 346 74 20 chr13 57665408 57665865 -62618447 + MER99 DNA hAT? 158 639 -192 2 1024 272 321 0 12 chr13 57667305 57667387 -62616925 - MIRb SINE MIR -35 233 153 2 1024 1206 69 0 0 chr13 57667745 57667890 -62616422 + B1_Mm SINE Alu 1 145 -2 2 1024 1276 186 67 32 chr13 57667958 57668270 -62616042 + ORR1A4 LTR MaLR 1 323 -6 2 1024 324 48 0 0 chr13 57669116 57669158 -62615154 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1024 204 125 0 0 chr13 57669193 57669225 -62615087 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1024 230 250 109 95 chr13 57669225 57669240 -62615072 - YREP_Mm Unknown Unknown -1488 324 236 2 1024 434 302 26 0 chr13 57669240 57669356 -62614956 + B1F SINE Alu 1 119 -30 2 1024 269 252 34 13 chr13 57669375 57669524 -62614788 + (CAGA)n Simple_repeat Simple_repeat 1 152 0 2 1024 272 227 0 0 chr13 57669459 57669525 -62614787 + GA-rich Low_complexity Low_complexity 2 67 0 2 1024 447 283 151 26 chr13 57669987 57670179 -62614133 + B3 SINE B2 1 216 0 2 1024 297 54 54 0 chr13 57670186 57670242 -62614070 + (CAAAAA)n Simple_repeat Simple_repeat 2 60 0 2 1024 206 62 31 0 chr13 57670973 57671005 -62613307 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 1024 1366 276 59 28 chr13 57671073 57671492 -62612820 - Lx8 LINE L1 -256 7217 6786 2 15 1910 123 200 14 chr13 57671492 57671847 -62612465 - MTC LTR MaLR 0 421 1 2 1025 1366 276 59 28 chr13 57671847 57671933 -62612379 - Lx8 LINE L1 -688 6785 6696 2 1025 1378 324 66 31 chr13 57671952 57672555 -62611757 + Lx8 LINE L1 6057 6680 -793 2 1025 393 71 43 0 chr13 57673000 57673070 -62611242 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 1025 259 138 95 11 chr13 57673079 57673226 -62611086 + (CA)n Simple_repeat Simple_repeat 1 159 0 2 1025 677 128 10 0 chr13 57673948 57674050 -62610262 - URR1B DNA MER1_type 0 225 123 2 1025 224 282 165 0 chr13 57675336 57675421 -62608891 - MIRm SINE MIR -13 263 165 2 1025 1863 190 26 42 chr13 57675465 57675845 -62608467 - ORR1D1 LTR MaLR 0 374 1 2 1025 748 263 83 18 chr13 57675895 57676112 -62608200 + MLT1A0 LTR MaLR 117 347 -18 2 1025 1423 296 96 76 chr13 57676114 57676867 -62607445 + MLT1A0-int LTR MaLR 3 770 -965 2 1025 414 0 0 0 chr13 57677217 57677263 -62607049 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1025 490 314 19 13 chr13 57677285 57677442 -62606870 - B4A SINE B4 -6 286 129 2 1025 3012 138 16 80 chr13 57677442 57677993 -62606319 - RMER20A LTR ERVK 0 516 1 2 1025 489 307 103 79 chr13 57678056 57678337 -62605975 + MLT1A0-int LTR MaLR 1443 1734 -1 2 1025 437 358 109 61 chr13 57678374 57678468 -62605844 + MLT1A0 LTR MaLR 39 141 -224 2 1025 828 236 64 15 chr13 57678468 57678670 -62605642 - B3 SINE B2 -4 212 1 2 1025 437 358 109 61 chr13 57678670 57678739 -62605573 + MLT1A0 LTR MaLR 142 200 -165 2 1025 465 34 0 0 chr13 57678739 57678798 -62605514 + (CAA)n Simple_repeat Simple_repeat 2 60 0 2 1025 437 358 109 61 chr13 57678798 57678945 -62605367 + MLT1A0 LTR MaLR 201 364 -1 2 1025 692 134 18 18 chr13 57679559 57679783 -62604529 + (CA)n Simple_repeat Simple_repeat 1 224 0 2 1025 491 274 37 53 chr13 57682071 57682260 -62602052 + Lx9 LINE L1 6991 7176 -468 2 1025 293 268 203 20 chr13 57682436 57682638 -62601674 + Lx9 LINE L1 7387 7625 -19 2 1025 207 300 0 0 chr13 57684477 57684527 -62599785 + C-rich Low_complexity Low_complexity 1 50 0 2 1025 247 286 128 28 chr13 57684979 57685159 -62599153 - L1M5 LINE L1 -317 5862 5665 2 1025 531 0 0 0 chr13 57685205 57685264 -62599048 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1025 450 0 0 0 chr13 57685386 57685436 -62598876 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1025 913 202 116 5 chr13 57685599 57685788 -62598524 + B3 SINE B2 1 210 -6 2 1025 183 432 17 0 chr13 57687207 57687325 -62596987 - MIRb SINE MIR -119 149 30 2 1025 222 240 20 0 chr13 57687552 57687602 -62596710 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 2 1025 591 264 72 18 chr13 57687797 57687963 -62596349 + Lx7 LINE L1 7100 7274 -422 2 1025 403 212 445 0 chr13 57688611 57688748 -62595564 + B3 SINE B2 5 202 -14 2 1025 294 50 0 0 chr13 57689351 57689391 -62594921 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 1025 188 347 33 104 chr13 57689772 57690013 -62594299 - L2b LINE L2 -221 3154 2931 2 1025 2150 116 35 12 chr13 57690831 57691283 -62593029 + ORR1A2 LTR MaLR 1 394 0 2 1025 1308 258 55 40 chr13 57691871 57692251 -62592061 - MTD LTR MaLR 0 419 34 2 1025 1249 176 34 17 chr13 57692625 57693032 -62591280 + L1_Mur2 LINE L1 903 1374 -4503 2 1025 262 221 27 0 chr13 57693238 57693328 -62590984 + PB1 SINE Alu 22 125 -2 2 1025 342 164 0 18 chr13 57693336 57693392 -62590920 + ID2 SINE ID 23 77 -6 2 1025 240 35 0 0 chr13 57693394 57693423 -62590889 + (CCAA)n Simple_repeat Simple_repeat 2 30 0 2 1025 1124 300 135 20 chr13 57693793 57694083 -62590229 - Lx8 LINE L1 -283 7190 6864 2 1025 243 0 0 0 chr13 57694083 57694110 -62590202 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1025 1124 300 135 20 chr13 57694110 57694329 -62589983 - Lx8 LINE L1 -610 6863 6622 2 1025 558 159 0 0 chr13 57694466 57694573 -62589739 + (TG)n Simple_repeat Simple_repeat 1 107 0 2 1025 302 330 0 0 chr13 57694584 57694675 -62589637 + (TG)n Simple_repeat Simple_repeat 1 91 0 2 1025 693 187 240 0 chr13 57694782 57694953 -62589359 + B3 SINE B2 1 212 -4 2 1025 29 0 0 0 chr13 57695497 57695526 -62588786 + AT_rich Low_complexity Low_complexity 1 29 0 2 1025 477 0 0 0 chr13 57696289 57696342 -62587970 + (TG)n Simple_repeat Simple_repeat 2 54 0 2 1025 1386 243 96 16 chr13 57697498 57697875 -62586437 + MTD LTR MaLR 1 407 -12 2 1025 489 329 50 122 chr13 57697886 57698288 -62586024 - MLT1B LTR MaLR -16 374 2 2 1025 478 176 128 0 chr13 57699606 57699708 -62584604 + ID_B1 SINE B4 103 217 -7 2 1025 423 0 0 0 chr13 57701785 57701832 -62582480 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1025 1805 150 185 82 chr13 57701999 57702399 -62581913 - BGLII_B LTR ERVK 0 441 1 2 1025 199 362 73 0 chr13 57703017 57703125 -62581187 - L2b LINE L2 -36 3390 3248 2 1025 248 77 0 25 chr13 57707318 57707358 -62576954 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2 1025 441 0 0 0 chr13 57707973 57708022 -62576290 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1025 207 0 0 0 chr13 57708121 57708144 -62576168 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1025 1075 95 0 20 chr13 57708144 57708284 -62576028 - B1_Mm SINE Alu -8 139 1 2 1025 193 387 30 48 chr13 57709073 57709241 -62575071 - L2b LINE L2 -11 3364 3200 2 1025 301 201 210 83 chr13 57709264 57709421 -62574891 + B4A SINE B4 48 224 -68 2 1025 892 92 0 0 chr13 57709304 57709424 -62574888 + B1_Mm SINE Alu 28 147 0 2 1025 1140 157 0 0 chr13 57710183 57710355 -62573957 + ORR1A3 LTR MaLR 153 324 -2 2 1025 1025 162 0 106 chr13 57710368 57710575 -62573737 - ORR1A3 LTR MaLR -141 185 1 2 1025 299 368 38 19 chr13 57710677 57710835 -62573477 - MIRb SINE MIR -83 185 25 2 1025 253 386 50 0 chr13 57711044 57711184 -62573128 + MLT1B LTR MaLR 37 183 -191 2 1025 269 274 14 0 chr13 57711221 57711294 -62573018 + MLT1B LTR MaLR 192 265 -125 2 1025 182 303 39 13 chr13 57713255 57713332 -62570980 - L2c LINE L2 -51 3336 3258 2 1025 196 360 99 34 chr13 57714347 57714580 -62569732 - L3b LINE CR1 -215 267 20 2 1025 574 162 81 0 chr13 57714838 57714937 -62569375 + PB1D10 SINE Alu 2 108 -9 2 1025 551 254 63 0 chr13 57714950 57715092 -62569220 + B3 SINE B2 1 151 -65 2 1025 1371 82 16 0 chr13 57715629 57715811 -62568501 - B2_Mm2 SINE B2 -7 188 4 2 1025 313 319 92 67 chr13 57715830 57716112 -62568200 - ORR1E LTR MaLR -16 343 55 2 1025 267 347 8 24 chr13 57716134 57716258 -62568054 - MLT1A0 LTR MaLR -243 122 1 2 1025 423 0 0 0 chr13 57716525 57716572 -62567740 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1025 426 251 0 0 chr13 57716752 57716931 -62567381 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1025 522 230 0 0 chr13 57716982 57717290 -62567022 + (TG)n Simple_repeat Simple_repeat 1 308 0 2 1025 201 302 12 0 chr13 57717291 57717377 -62566935 + (TATATG)n Simple_repeat Simple_repeat 4 90 0 2 1025 350 226 7 0 chr13 57717379 57717516 -62566796 + (TG)n Simple_repeat Simple_repeat 2 139 0 2 1025 315 135 19 19 chr13 57717540 57717593 -62566719 - HAL1-3A_ME LINE L1 -831 2027 1975 2 1025 414 213 27 0 chr13 57717595 57717670 -62566642 - ID4_ SINE ID -6 77 1 2 1025 459 185 0 0 chr13 57718601 57718693 -62565619 + CT-rich Low_complexity Low_complexity 2 93 0 2 1025 336 329 45 51 chr13 57718697 57718854 -62565458 - HAL1-3A_ME LINE L1 -419 2439 2284 3 1025 238 333 10 61 chr13 57719716 57719815 -62564497 + B1F SINE Alu 56 149 0 3 1025 204 122 0 0 chr13 57719885 57719926 -62564386 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 3 1025 279 0 0 0 chr13 57719927 57719958 -62564354 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1025 216 0 0 0 chr13 57720661 57720685 -62563627 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1025 24 32 0 0 chr13 57720741 57720772 -62563540 + AT_rich Low_complexity Low_complexity 1 31 0 3 1025 408 88 0 0 chr13 57722527 57722584 -62561728 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1025 2048 148 82 3 chr13 57722853 57723193 -62561119 - ORR1B2 LTR MaLR 0 367 1 3 1025 1110 296 42 42 chr13 57723421 57723777 -62560535 + ORR1E LTR MaLR 4 359 0 3 1025 3649 264 69 17 chr13 57723780 57724761 -62559551 + ORR1E-int LTR MaLR 3 1034 -546 3 1025 449 248 38 51 chr13 57724782 57724923 -62559389 + ORR1E-int LTR MaLR 1392 1530 -50 3 1025 730 259 144 27 chr13 57724923 57725237 -62559075 + ORR1E LTR MaLR 4 378 -1 3 1025 339 96 0 0 chr13 57727477 57727529 -62556783 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1025 682 215 120 33 chr13 57728432 57728615 -62555697 - B3 SINE B2 -17 199 1 3 1025 715 285 16 5 chr13 57730488 57730675 -62553637 + ERVL-B4-int LTR ERVL 4309 4497 -1217 3 1025 287 337 0 0 chr13 57732793 57732876 -62551436 + ID4_ SINE ID 1 83 0 3 1025 217 319 146 24 chr13 57732963 57733127 -62551185 + MIR SINE MIR 45 228 -34 3 1025 278 50 25 0 chr13 57733505 57733545 -62550767 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 3 1025 1111 74 81 0 chr13 57733545 57733694 -62550618 - B2_Mm2 SINE B2 -34 161 1 3 1025 1228 112 0 6 chr13 57734164 57734334 -62549978 - B2_Mm2 SINE B2 -25 170 2 3 1025 276 283 177 14 chr13 57735042 57735189 -62549123 + L2a LINE L2 2124 2294 -1125 3 1025 705 180 154 6 chr13 57735240 57735402 -62548910 - MTD LTR MaLR -15 404 219 3 1025 405 0 0 0 chr13 57735446 57735491 -62548821 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 3 1025 450 53 0 0 chr13 57735508 57735565 -62548747 + (GA)n Simple_repeat Simple_repeat 1 57 0 3 1025 323 343 36 14 chr13 57735598 57735737 -62548575 - MTD LTR MaLR -276 143 2 3 1025 213 321 58 71 chr13 57735837 57736062 -62548250 + L2a LINE L2 2580 2801 -618 3 1025 2391 159 60 2 chr13 57736221 57736619 -62547693 + MTC LTR MaLR 1 421 0 3 1025 213 336 38 101 chr13 57736619 57736901 -62547411 + L2a LINE L2 3100 3364 -62 3 1025 678 343 78 20 chr13 57736941 57737286 -62547026 + RMER5 LTR ERV1 153 517 -17 3 1025 204 336 96 70 chr13 57740420 57740577 -62543735 + MIRc SINE MIR 20 180 -88 3 1025 872 266 55 55 chr13 57740597 57740888 -62543424 + B4A SINE B4 1 291 -1 3 1025 1364 86 16 0 chr13 57741176 57741362 -62542950 + B2_Mm1t SINE B2 5 193 0 3 1025 200 324 29 0 chr13 57741837 57741905 -62542407 - MIRb SINE MIR -38 230 161 3 1025 438 20 0 0 chr13 57742000 57742051 -62542261 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1025 367 306 58 42 chr13 57742733 57742924 -62541388 - MIRb SINE MIR -5 263 70 3 1025 206 32 0 31 chr13 57743646 57743678 -62540634 + (CAA)n Simple_repeat Simple_repeat 1 31 0 3 1025 555 215 348 0 chr13 57745682 57745840 -62538472 - B3 SINE B2 0 216 4 3 1025 622 339 71 27 chr13 57746599 57746893 -62537419 + MER21B LTR ERV1 450 756 -107 3 1025 2107 132 50 6 chr13 57746914 57747272 -62537040 - ORR1D1 LTR MaLR 0 374 1 3 1025 223 264 0 0 chr13 57747458 57747511 -62536801 - L2b LINE L2 -1 3374 3322 3 1025 297 0 0 0 chr13 57749580 57749613 -62534699 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1025 233 319 0 0 chr13 57750030 57750099 -62534213 - MER117 DNA MER1_type -33 164 96 3 1025 336 336 17 8 chr13 57750929 57751046 -62533266 + MLT1A LTR MaLR 43 160 -214 3 1025 481 293 0 33 chr13 57751084 57751204 -62533108 + PB1D10 SINE Alu 2 117 0 3 1025 289 173 38 62 chr13 57751260 57751340 -62532972 + MLT1A LTR MaLR 329 406 -2 3 1025 234 0 0 0 chr13 57753352 57753378 -62530934 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1025 22 35 0 0 chr13 57753537 57753566 -62530746 + AT_rich Low_complexity Low_complexity 1 29 0 3 1025 318 132 0 0 chr13 57754753 57754806 -62529506 - PB1D9 SINE Alu -55 65 13 3 1025 621 220 89 40 chr13 57754997 57755198 -62529114 - B3A SINE B2 -3 213 6 3 1025 212 111 0 22 chr13 57755264 57755310 -62529002 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 3 1025 317 313 81 40 chr13 57755585 57755758 -62528554 - Tigger8 DNA MER2_type -173 493 314 3 1025 416 255 57 38 chr13 57757513 57757619 -62526693 - MTD LTR MaLR -311 108 1 3 1025 326 344 110 16 chr13 57757645 57757899 -62526413 + B4 SINE B4 3 280 -12 3 1025 300 316 120 63 chr13 57757995 57758137 -62526175 + MER21B LTR ERV1 144 293 -570 3 1025 213 39 0 0 chr13 57761889 57761915 -62522397 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 3 1025 748 267 43 5 chr13 57762439 57762646 -62521666 - B3 SINE B2 -1 215 1 3 1025 1042 302 153 57 chr13 57762742 57763539 -62520773 - L1MD2 LINE L1 -39 6580 5716 3 1025 375 41 0 0 chr13 57763539 57763588 -62520724 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1025 1042 302 153 57 chr13 57763588 57763703 -62520609 - L1MD2 LINE L1 -904 5715 5580 3 1025 581 224 9 0 chr13 57763719 57763835 -62520477 + B3 SINE B2 3 119 -97 3 1025 2284 69 6 62 chr13 57763839 57764177 -62520135 - ORR1A2 LTR MaLR -8 319 1 3 1025 627 206 0 0 chr13 57764177 57764274 -62520038 + B3 SINE B2 115 211 -5 3 1025 730 167 23 11 chr13 57764402 57764578 -62519734 + CT-rich Low_complexity Low_complexity 1 178 0 3 1025 185 94 31 0 chr13 57764580 57764612 -62519700 + (TTCC)n Simple_repeat Simple_repeat 4 36 0 3 1025 390 301 114 75 chr13 57764869 57765228 -62519084 - L1MD2 LINE L1 -1566 4840 4468 3 1025 328 310 176 21 chr13 57765245 57765433 -62518879 - L1MD2 LINE L1 -5694 715 499 3 1025 546 260 216 15 chr13 57765537 57765806 -62518506 - L1MD2 LINE L1 -6079 330 8 3 1025 292 292 101 14 chr13 57766635 57766774 -62517538 + L1MA6 LINE L1 6123 6273 -27 3 1025 338 209 0 69 chr13 57767537 57767609 -62516703 + URR1A DNA MER1_type 2 68 -158 3 1025 186 387 112 6 chr13 57768399 57768568 -62515744 - MER5A DNA MER1_type -2 187 1 3 1025 365 380 36 15 chr13 57768632 57768827 -62515485 + MIRb SINE MIR 13 211 -57 3 1025 522 361 193 21 chr13 57769609 57770095 -62514217 + MER21B LTR ERV1 98 667 -196 3 1025 333 0 0 0 chr13 57770657 57770694 -62513618 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1025 432 37 0 0 chr13 57771349 57771403 -62512909 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1025 2271 92 41 0 chr13 57771480 57771794 -62512518 + ORR1A2 LTR MaLR 1 327 0 3 1025 1074 72 34 7 chr13 57771849 57772142 -62512170 + (TG)n Simple_repeat Simple_repeat 1 300 0 3 1025 457 324 10 36 chr13 57772218 57772413 -62511899 + L1MC LINE L1 5572 5761 -2121 3 1025 273 57 0 0 chr13 57774357 57774392 -62509920 + (CACCC)n Simple_repeat Simple_repeat 3 37 0 3 1025 186 103 0 0 chr13 57774636 57774665 -62509647 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 3 1025 192 152 0 0 chr13 57774676 57774709 -62509603 + (CATA)n Simple_repeat Simple_repeat 3 35 0 3 1025 198 0 0 0 chr13 57774730 57774752 -62509560 + (TG)n Simple_repeat Simple_repeat 2 23 0 3 1025 237 65 0 0 chr13 57774788 57774819 -62509493 + (TATATG)n Simple_repeat Simple_repeat 1 31 0 3 1025 392 158 13 0 chr13 57774829 57774905 -62509407 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1025 320 195 187 44 chr13 57774905 57774996 -62509316 - B1_Mus2 SINE Alu -41 106 3 3 1025 1178 220 182 8 chr13 57777348 57777746 -62506566 + MT2A LTR ERVL 8 484 -49 3 1025 447 19 0 0 chr13 57777746 57777798 -62506514 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1025 243 0 0 0 chr13 57777798 57777824 -62506488 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1025 1178 225 137 12 chr13 57777824 57777871 -62506441 + MT2A LTR ERVL 485 529 -4 3 1025 1371 143 9 31 chr13 57778028 57778251 -62506061 - URR1A DNA MER1_type 0 226 9 3 1025 1143 82 0 20 chr13 57778574 57778585 -62505727 - B1_Mus2 SINE Alu 0 147 139 3 1025 344 40 20 0 chr13 57778585 57778635 -62505677 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 1025 1143 82 0 20 chr13 57778635 57778773 -62505539 - B1_Mus2 SINE Alu -9 138 1 3 1025 270 81 0 0 chr13 57779504 57779541 -62504771 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1025 335 313 63 113 chr13 57779823 57780125 -62504187 + L1ME4a LINE L1 5581 5867 -257 3 1025 369 0 0 0 chr13 57780271 57780312 -62504000 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1025 621 323 67 55 chr13 57780588 57780916 -62503396 + MER58B DNA MER1_type 4 335 -6 3 1025 372 296 170 0 chr13 57781678 57781837 -62502475 - MER5A DNA MER1_type 0 189 4 3 1025 233 287 85 54 chr13 57782702 57782831 -62501481 - L2b LINE L2 -164 3223 3088 3 1025 476 301 143 11 chr13 57783163 57783338 -62500974 - B3 SINE B2 -14 202 5 3 1025 326 216 27 59 chr13 57784520 57784620 -62499692 - MTD LTR MaLR -20 359 271 3 1025 2112 137 25 28 chr13 57784623 57784983 -62499329 - ORR1B1 LTR MaLR 0 394 36 3 1025 674 292 27 54 chr13 57785047 57785268 -62499044 - MTD LTR MaLR -204 215 1 3 1025 379 313 95 37 chr13 57785458 57785647 -62498665 + L4 LINE RTE 641 840 -1189 3 1025 287 320 131 41 chr13 57785958 57786202 -62498110 + RMER12 LTR ERVK 729 994 -328 3 1025 1073 51 72 0 chr13 57786283 57786421 -62497891 - B1_Mus1 SINE Alu 0 148 1 3 1025 205 359 11 21 chr13 57786726 57786820 -62497492 + L4 LINE RTE 1406 1498 -531 3 1025 303 49 0 0 chr13 57786942 57786983 -62497329 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 1025 21 0 0 0 chr13 57787017 57787038 -62497274 + AT_rich Low_complexity Low_complexity 1 21 0 3 1025 4269 148 116 16 chr13 57787087 57787898 -62496414 + Lx3C LINE L1 6084 6975 -1 3 1025 740 288 36 121 chr13 57788078 57788492 -62495820 + MTE2a LTR MaLR 1 379 0 3 1025 333 0 0 0 chr13 57788757 57788794 -62495518 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1025 450 0 0 0 chr13 57788794 57788843 -62495469 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1025 533 153 24 8 chr13 57789085 57789210 -62495102 + (CA)n Simple_repeat Simple_repeat 2 128 0 3 1025 348 179 0 0 chr13 57789242 57789298 -62495014 + HAL1-3A_ME LINE L1 1976 2031 -827 3 1025 484 235 51 17 chr13 57789390 57789507 -62494805 - B1F SINE Alu 0 149 29 3 1025 471 18 0 0 chr13 57789576 57789632 -62494680 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1025 522 360 56 29 chr13 57789866 57790207 -62494105 + MLT1A0 LTR MaLR 1 350 -15 4 1025 2088 169 76 10 chr13 57792053 57792448 -62491864 - MTC LTR MaLR 0 421 1 4 1025 373 283 204 50 chr13 57794445 57794646 -62489666 - RMER20B LTR ERVK -216 411 180 4 1025 1368 213 33 30 chr13 57794654 57794959 -62489353 + MTD LTR MaLR 113 418 -1 4 1025 404 290 50 37 chr13 57796685 57796846 -62487466 + RSINE1 SINE B4 3 165 0 4 1025 342 234 0 0 chr13 57796849 57796956 -62487356 + (CA)n Simple_repeat Simple_repeat 2 108 0 4 1025 342 0 0 0 chr13 57797166 57797204 -62487108 + (A)n Simple_repeat Simple_repeat 1 38 0 4 1025 183 42 0 0 chr13 57797233 57797257 -62487055 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1025 215 276 0 10 chr13 57801238 57801337 -62482975 + (CA)n Simple_repeat Simple_repeat 1 98 0 4 1025 858 308 96 16 chr13 57801484 57801797 -62482515 + MER2 DNA MER2_type 1 338 -7 4 1026 403 331 61 0 chr13 57804531 57804679 -62479633 + MIRb SINE MIR 18 174 -94 4 1026 804 284 39 5 chr13 57805413 57805618 -62478694 + B3 SINE B2 4 215 -1 4 1026 180 147 0 29 chr13 57805839 57805874 -62478438 - MER5B DNA MER1_type -119 59 26 4 1026 219 274 96 0 chr13 57806088 57806161 -62478151 + ID4_ SINE ID 4 83 0 4 1026 650 251 63 84 chr13 57806427 57806618 -62477694 + ORR1E LTR MaLR 10 196 -163 4 1026 365 83 71 27 chr13 57806618 57806730 -62477582 + (TCTA)n Simple_repeat Simple_repeat 4 120 0 4 1026 360 144 102 7 chr13 57806763 57806910 -62477402 + (TCTA)n Simple_repeat Simple_repeat 2 162 0 4 1026 583 102 82 17 chr13 57806949 57807199 -62477113 + (TCTA)n Simple_repeat Simple_repeat 1 266 0 4 1026 285 29 0 0 chr13 57807199 57807233 -62477079 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 1026 583 90 70 13 chr13 57807233 57807298 -62477014 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 4 1026 562 174 63 49 chr13 57807311 57807478 -62476834 + ORR1E LTR MaLR 195 375 -4 4 1026 2549 71 16 0 chr13 57807598 57807920 -62476392 + ORR1A2 LTR MaLR 1 327 0 4 1026 377 298 87 35 chr13 57807956 57808139 -62476173 - MIRb SINE MIR -56 212 2 4 1026 270 0 0 0 chr13 57809857 57809887 -62474425 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 1026 351 0 0 0 chr13 57809887 57809925 -62474387 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1026 206 279 70 42 chr13 57811599 57811670 -62472642 + L4 LINE RTE 1204 1276 -753 4 1026 1182 82 3 0 chr13 57811793 57812088 -62472224 + (CA)n Simple_repeat Simple_repeat 1 296 0 4 1026 537 16 0 0 chr13 57812932 57812994 -62471318 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1026 2208 104 9 69 chr13 57815744 57816094 -62468218 + ORR1A4 LTR MaLR 1 329 0 4 1026 9722 123 79 105 chr13 57816097 57816396 -62467916 + ORR1A4-int LTR MaLR 43 399 -1564 4 1026 1445 70 11 5 chr13 57816396 57816584 -62467728 + B2_Mm2 SINE B2 2 190 -5 4 1026 9722 123 79 105 chr13 57816584 57818257 -62466055 + ORR1A4-int LTR MaLR 400 1963 0 4 1026 2138 109 0 48 chr13 57818257 57818593 -62465719 + ORR1A4 LTR MaLR 1 320 -9 4 1026 1132 191 216 31 chr13 57820041 57820393 -62463919 - MTD LTR MaLR -2 417 1 4 1026 1163 61 0 13 chr13 57820733 57820882 -62463430 - B1_Mus2 SINE Alu 0 147 1 4 1026 831 254 42 0 chr13 57821863 57822052 -62462260 + B3A SINE B2 1 197 -1 4 1026 21 0 0 0 chr13 57822141 57822162 -62462150 + AT_rich Low_complexity Low_complexity 1 21 0 4 1026 203 206 45 60 chr13 57822180 57822247 -62462065 + MIRc SINE MIR 25 90 -178 4 1026 423 296 47 66 chr13 57822882 57823095 -62461217 - RMER15 LTR ERVL -12 563 355 4 1026 333 251 130 48 chr13 57824769 57824995 -62459317 + MTEa LTR MaLR 119 378 -1 4 1026 866 190 23 48 chr13 57825538 57825759 -62458553 + B3A SINE B2 4 215 -1 4 1026 467 333 45 6 chr13 57825893 57826071 -62458241 + MLT1A0 LTR MaLR 147 331 -34 4 1026 260 309 59 29 chr13 57826819 57826989 -62457323 + L1M2 LINE L1 5607 5781 -531 4 1026 1443 221 63 27 chr13 57827088 57827419 -62456893 - ORR1E LTR MaLR -11 348 6 4 1026 184 261 0 0 chr13 57827826 57827872 -62456440 + L2b LINE L2 3306 3351 -24 4 1026 324 348 83 0 chr13 57828163 57828416 -62455896 - L1MEb LINE L1 -3763 2383 2110 4 1026 192 40 0 0 chr13 57828421 57828446 -62455866 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1026 284 253 95 95 chr13 57828446 57828551 -62455761 - PB1D7 SINE Alu -10 110 6 4 1026 238 253 21 52 chr13 57828918 57829014 -62455298 - Lx8 LINE L1 0 7473 7381 4 1026 259 261 22 11 chr13 57829046 57829135 -62455177 + (TATATG)n Simple_repeat Simple_repeat 4 93 0 4 1026 523 264 62 46 chr13 57829145 57829162 -62455150 - B3A SINE B2 0 198 183 4 1026 399 41 0 0 chr13 57829162 57829211 -62455101 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1026 523 264 62 46 chr13 57829211 57829388 -62454924 - B3A SINE B2 -16 182 1 4 1026 368 55 18 0 chr13 57829788 57829843 -62454469 + (TTG)n Simple_repeat Simple_repeat 2 57 0 4 1026 1762 224 54 20 chr13 57829890 57830295 -62454017 + MTD LTR MaLR 1 419 0 4 1026 288 342 96 51 chr13 57830425 57830893 -62453419 - L1MEb LINE L1 -5199 937 449 4 1026 652 255 66 10 chr13 57830951 57831149 -62453163 - B3 SINE B2 -7 209 1 4 1026 1894 171 22 94 chr13 57831364 57831770 -62452542 + ORR1B1 LTR MaLR 18 394 0 4 1026 438 352 129 37 chr13 57831936 57832284 -62452028 + Arthur1B DNA Tip100 17 396 -829 4 1026 1404 263 84 32 chr13 57832329 57832852 -62451460 + Arthur1B DNA Tip100 478 1027 -198 4 1026 656 124 0 0 chr13 57833365 57833462 -62450850 + RLTR11A LTR ERVK 432 528 0 4 1026 464 290 6 6 chr13 57833727 57833978 -62450334 + (GGATG)n Simple_repeat Simple_repeat 1 251 0 4 1026 321 26 0 0 chr13 57834010 57834048 -62450264 + (TC)n Simple_repeat Simple_repeat 2 39 0 4 1026 527 131 58 122 chr13 57835083 57835212 -62449100 + ORR1C1 LTR MaLR 6 125 -253 4 1026 2026 160 28 14 chr13 57835212 57835574 -62448738 + ORR1B2 LTR MaLR 1 367 0 4 1026 214 295 73 49 chr13 57837118 57837200 -62447112 + MIR SINE MIR 19 102 -160 4 1026 236 218 0 18 chr13 57837247 57837303 -62447009 + GA-rich Low_complexity Low_complexity 4 58 0 4 1026 269 291 107 33 chr13 57841105 57841333 -62442979 + MIRc SINE MIR 12 262 0 4 1026 252 319 33 58 chr13 57842383 57842503 -62441809 - MER5A1 DNA MER1_type -3 163 47 4 1026 1286 78 0 6 chr13 57843565 57843746 -62440566 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1026 776 111 14 14 chr13 57843748 57843894 -62440418 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 4 1026 324 48 0 0 chr13 57845795 57845837 -62438475 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1026 500 145 79 108 chr13 57846378 57846517 -62437795 - RMER17C LTR ERVK -274 136 2 4 1026 707 233 148 76 chr13 57846612 57846951 -62437361 - MTD LTR MaLR -14 405 13 4 1026 465 66 0 0 chr13 57847584 57847645 -62436667 + (GA)n Simple_repeat Simple_repeat 2 62 0 4 1026 520 233 14 79 chr13 57847820 57847960 -62436352 + Lx6 LINE L1 6919 7049 -411 4 1026 414 337 149 44 chr13 57848152 57848562 -62435750 + L1M4c LINE L1 1346 1798 -4586 4 1026 1215 56 6 22 chr13 57848624 57848807 -62435505 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1026 316 243 25 93 chr13 57848995 57849113 -62435199 + L1M4c LINE L1 2355 2464 -3912 4 1026 2904 228 83 17 chr13 57849161 57849906 -62434406 - Lx6 LINE L1 -5 7455 6662 4 1026 180 0 0 0 chr13 57850066 57850086 -62434226 + (TCC)n Simple_repeat Simple_repeat 3 22 0 4 1026 306 0 0 0 chr13 57850802 57850836 -62433476 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1026 324 0 0 0 chr13 57851263 57851299 -62433013 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1026 1098 97 0 0 chr13 57853183 57853327 -62430985 - B1_Mus1 SINE Alu 0 148 5 4 1026 218 171 55 41 chr13 57854373 57854385 -62429927 + (TCTA)n Simple_repeat Simple_repeat 3 12 0 4 1026 922 63 27 49 chr13 57854385 57854569 -62429743 + (CCTA)n Simple_repeat Simple_repeat 1 180 0 4 1026 218 171 55 41 chr13 57854569 57854629 -62429683 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 4 1026 432 167 21 65 chr13 57854630 57854816 -62429496 + (CCTA)n Simple_repeat Simple_repeat 3 180 0 4 1026 217 140 39 20 chr13 57854817 57854868 -62429444 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 4 1026 300 283 104 45 chr13 57855967 57856107 -62428205 - MIRb SINE MIR -70 198 55 4 1026 249 294 25 25 chr13 57859172 57859294 -62425018 + L1MB7 LINE L1 6052 6173 -11 4 1026 255 31 0 0 chr13 57861585 57861617 -62422695 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1026 255 152 0 0 chr13 57862966 57863012 -62421300 + GA-rich Low_complexity Low_complexity 4 49 0 4 1026 207 0 0 0 chr13 57863009 57863032 -62421280 + (CAGAGA)n Simple_repeat Simple_repeat 3 25 0 4 1026 375 189 38 0 chr13 57865248 57865354 -62418958 + (TAGA)n Simple_repeat Simple_repeat 2 111 0 4 1026 748 196 6 6 chr13 57865364 57865544 -62418768 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 4 1026 180 125 0 0 chr13 57865565 57865597 -62418715 + (TGGA)n Simple_repeat Simple_repeat 1 32 0 4 1026 192 77 0 0 chr13 57865624 57865650 -62418662 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 4 1026 492 297 127 56 chr13 57865675 57866014 -62418298 + RLTR9A LTR ERVK 6 368 0 4 1026 440 311 131 125 chr13 57866737 57867034 -62417278 - Tigger7 DNA MER2_type -10 2481 2183 4 1026 615 287 104 18 chr13 57867062 57867282 -62417030 - Tigger7 DNA MER2_type -2253 238 1 4 1026 414 324 55 7 chr13 57867880 57868026 -62416286 + MER20 DNA MER1_type 8 160 -59 4 1026 222 62 0 0 chr13 57868176 57868208 -62416104 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1026 1148 211 30 0 chr13 57868818 57869017 -62415295 + B3 SINE B2 11 215 -1 4 1026 201 121 0 0 chr13 57870113 57870146 -62414166 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1026 279 71 0 0 chr13 57870314 57870356 -62413956 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 4 1026 1414 48 16 5 chr13 57870361 57870548 -62413764 - L1Md_F3 LINE L1 -15 6569 6381 4 1026 278 288 32 48 chr13 57871364 57871488 -62412824 - MER5A1 DNA MER1_type -29 137 16 4 1026 288 302 75 8 chr13 57872897 57873017 -62411295 - MLT1A LTR MaLR -15 359 232 4 1026 3409 33 2 5 chr13 57875549 57875946 -62408366 - MTA_Mm LTR MaLR 0 396 1 4 1026 313 256 12 25 chr13 57877310 57877390 -62406922 - HAL1-3A_ME LINE L1 -805 2053 1975 4 1026 796 134 87 128 chr13 57877836 57878032 -62406280 + B2_Mm2 SINE B2 1 188 -7 5 1026 1990 219 35 8 chr13 57878079 57878487 -62405825 + MTD LTR MaLR 1 405 -14 5 1026 187 171 0 0 chr13 57880130 57880165 -62404147 + MIR SINE MIR 183 217 -45 5 1026 446 281 62 8 chr13 57880197 57880326 -62403986 - MIRb SINE MIR 0 268 133 5 1026 26 0 0 0 chr13 57880400 57880426 -62403886 + AT_rich Low_complexity Low_complexity 1 26 0 5 1026 1302 243 52 27 chr13 57881340 57881670 -62402642 + ORR1E LTR MaLR 16 353 -6 5 1026 699 333 53 76 chr13 57881910 57882290 -62402022 + MLT1A LTR MaLR 1 371 -3 5 1026 255 352 64 9 chr13 57882334 57882443 -62401869 + L2b LINE L2 3259 3373 -2 5 1026 414 269 37 0 chr13 57883141 57883249 -62401063 + ORR1E LTR MaLR 18 129 -230 5 1026 719 296 37 0 chr13 57883579 57883795 -62400517 - MER58A DNA MER1_type 0 224 1 5 1026 193 267 44 0 chr13 57883899 57883944 -62400368 - MIRb SINE MIR -186 82 36 5 1026 184 310 197 0 chr13 57884339 57884410 -62399902 + MIRm SINE MIR 45 129 -147 5 1026 227 322 75 11 chr13 57885159 57885253 -62399059 - MIRb SINE MIR -76 192 93 5 1026 294 29 0 0 chr13 57885339 57885374 -62398938 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 5 1026 271 361 0 22 chr13 57886339 57886523 -62397789 + (CAGCT)n Simple_repeat Simple_repeat 1 180 0 5 1026 384 352 0 0 chr13 57886526 57886882 -62397430 + (CACAG)n Simple_repeat Simple_repeat 1 356 0 5 1026 234 0 0 0 chr13 57887320 57887346 -62396966 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1026 207 332 70 9 chr13 57888086 57888214 -62396098 - MIRb SINE MIR -13 255 116 5 1026 256 318 0 12 chr13 57888761 57888847 -62395465 + GA-rich Low_complexity Low_complexity 4 88 0 5 1026 1051 177 26 5 chr13 57889755 57889948 -62394364 + B3 SINE B2 20 216 0 5 1026 184 278 99 40 chr13 57890152 57890253 -62394059 - L2b LINE L2 -256 3119 3013 5 1026 717 284 46 62 chr13 57891338 57891661 -62392651 - MLT1A LTR MaLR -18 356 39 5 1026 371 215 15 23 chr13 57891863 57891996 -62392316 + C-rich Low_complexity Low_complexity 1 132 0 5 1026 1015 72 15 9 chr13 57892875 57893021 -62391291 - B2_Mm2 SINE B2 -71 145 1 5 1026 342 0 0 0 chr13 57893520 57893558 -62390754 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1026 297 0 0 0 chr13 57893563 57893596 -62390716 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 5 1026 1956 173 9 49 chr13 57893897 57894322 -62389990 - RMER17C LTR ERVK -2 408 1 5 1026 189 0 0 0 chr13 57895717 57895738 -62388574 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 5 1026 655 251 17 28 chr13 57896524 57896700 -62387612 - B3A SINE B2 -24 174 1 5 1026 297 0 0 0 chr13 57896769 57896802 -62387510 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1026 333 0 0 0 chr13 57900095 57900132 -62384180 + (A)n Simple_repeat Simple_repeat 1 37 0 5 1026 446 223 0 8 chr13 57901451 57901573 -62382739 + CT-rich Low_complexity Low_complexity 1 121 0 5 1026 449 327 58 29 chr13 57902241 57902414 -62381898 - MER58A DNA MER1_type -7 217 40 5 1026 1200 276 107 98 chr13 57902415 57902481 -62381831 + L1MC1 LINE L1 4271 4327 -1819 5 1026 862 172 0 20 chr13 57902481 57902629 -62381683 + B1_Mur3 SINE Alu 5 149 0 5 1026 1200 276 107 98 chr13 57902629 57903061 -62381251 + L1MC1 LINE L1 4328 4733 -1413 5 1026 2000 147 70 14 chr13 57903061 57903405 -62380907 + ORR1B2 LTR MaLR 5 367 0 5 1026 1993 284 103 49 chr13 57903405 57904866 -62379446 + L1MC1 LINE L1 4734 6318 -15 5 1026 335 283 92 28 chr13 57904871 57904980 -62379332 + PB1D10 SINE Alu 1 116 -1 5 1026 210 309 12 23 chr13 57904980 57905014 -62379298 + (TAGA)n Simple_repeat Simple_repeat 1 35 0 5 1026 441 36 0 0 chr13 57905014 57905069 -62379243 + (CATA)n Simple_repeat Simple_repeat 2 56 0 5 1026 210 309 12 23 chr13 57905069 57905120 -62379192 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 5 1026 202 200 25 0 chr13 57905099 57905139 -62379173 + (TGGG)n Simple_repeat Simple_repeat 4 44 0 5 1026 181 114 0 83 chr13 57905140 57905188 -62379124 + GA-rich Low_complexity Low_complexity 3 46 0 5 1026 303 299 149 20 chr13 57908901 57909071 -62375241 + MIR SINE MIR 31 238 -30 5 1026 277 261 87 87 chr13 57910842 57910968 -62373344 + Charlie4z DNA MER1_type 14 139 -28 5 1026 689 279 31 49 chr13 57912058 57912284 -62372028 - Lx8 LINE L1 -99 7374 7153 5 1026 1758 194 158 48 chr13 57912664 57913043 -62371269 + RLTR20C LTR ERVK 1 428 -106 5 1026 306 0 0 0 chr13 57913043 57913077 -62371235 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1026 1758 194 158 48 chr13 57913077 57913178 -62371134 + RLTR20C LTR ERVK 429 533 -1 5 1026 234 0 0 0 chr13 57913305 57913331 -62370981 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1026 183 289 58 0 chr13 57913351 57913403 -62370909 - MIRc SINE MIR -43 225 171 5 1026 228 282 64 0 chr13 57914453 57914531 -62369781 + L2c LINE L2 3084 3166 -221 5 1026 189 0 0 0 chr13 57916061 57916082 -62368230 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 5 1026 218 366 68 27 chr13 57916720 57916866 -62367446 - MIRc SINE MIR -38 230 79 5 1026 370 78 0 0 chr13 57917000 57917064 -62367248 - L1_Mus4 LINE L1 -3 6633 6570 5 1026 1364 78 16 11 chr13 57917065 57917247 -62367065 - B2_Mm2 SINE B2 -12 183 1 5 1026 454 193 30 149 chr13 57918526 57918660 -62365652 + ORR1D2 LTR MaLR 1 118 -252 5 1026 3878 161 40 14 chr13 57918756 57919123 -62365189 - RMER6D LTR ERVK 0 720 349 5 1026 360 0 0 0 chr13 57919123 57919163 -62365149 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1026 3878 161 40 14 chr13 57919163 57919496 -62364816 - RMER6D LTR ERVK -372 348 2 5 1026 544 338 162 34 chr13 57919803 57920118 -62364194 - L2a LINE L2 -25 3401 3051 5 1026 1897 0 5 0 chr13 57920118 57920333 -62363979 + L1Md_T LINE L1 6367 6582 0 5 1026 544 311 86 39 chr13 57920333 57920660 -62363652 - L2a LINE L2 -369 3050 2703 5 1026 557 259 6 0 chr13 57921326 57921500 -62362812 + (TG)n Simple_repeat Simple_repeat 1 175 0 5 1026 785 251 104 28 chr13 57921562 57921812 -62362500 - B4 SINE B4 -18 274 6 5 1026 238 296 66 9 chr13 57923740 57923857 -62360455 - MIRc SINE MIR -106 162 33 5 1026 1152 119 4 0 chr13 57924431 57924670 -62359642 + (TGGA)n Simple_repeat Simple_repeat 1 240 0 5 1026 1269 281 74 16 chr13 57924701 57925132 -62359180 - Lx8 LINE L1 -58 7415 6960 5 1026 185 296 151 39 chr13 57925365 57925544 -62358768 + L2 LINE L2 2870 3068 -351 5 1026 252 248 41 114 chr13 57926918 57927041 -62357271 + MIRb SINE MIR 131 244 -24 5 1026 195 42 0 0 chr13 57928183 57928207 -62356105 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1026 195 214 24 0 chr13 57928490 57928532 -62355780 - L2a LINE L2 -65 3361 3319 5 1026 839 272 137 35 chr13 57929282 57929460 -62354852 + B4 SINE B4 1 208 -84 5 1026 2320 94 21 15 chr13 57929460 57929785 -62354527 - ORR1A2 LTR MaLR 0 327 1 5 1026 839 272 137 35 chr13 57929785 57929861 -62354451 + B4 SINE B4 209 281 -11 5 1026 459 0 0 0 chr13 57930391 57930442 -62353870 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 5 1026 182 150 0 24 chr13 57932055 57932096 -62352216 + GA-rich Low_complexity Low_complexity 1 40 0 5 128 552 291 199 10 chr13 57933817 57934234 -62350078 + L1MEc LINE L1 1341 1836 -4564 5 1027 267 125 55 33 chr13 57934324 57934415 -62349897 + (TAGA)n Simple_repeat Simple_repeat 3 95 0 5 1027 323 154 15 0 chr13 57934413 57934478 -62349834 + GA-rich Low_complexity Low_complexity 4 69 0 5 1027 1773 201 78 6 chr13 57934692 57935037 -62349275 + ORR1D2 LTR MaLR 1 370 0 5 1027 251 384 0 52 chr13 57935095 57935172 -62349140 + ID4 SINE ID 3 75 -8 5 1027 473 306 74 8 chr13 57935216 57935460 -62348852 - L1M4 LINE L1 -653 5526 5267 5 1027 293 212 17 17 chr13 57935476 57935591 -62348721 + (TA)n Simple_repeat Simple_repeat 2 116 0 5 1027 333 366 30 30 chr13 57935601 57935736 -62348576 - L1M4 LINE L1 -1215 4931 4797 5 1027 692 291 73 82 chr13 57935771 57936261 -62348051 + L1ME1 LINE L1 5688 6173 -6 5 1027 1905 165 77 7 chr13 57936987 57937373 -62346939 + RLTR20D LTR ERVK 6 400 -105 5 1027 306 0 0 0 chr13 57937373 57937407 -62346905 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1027 1245 239 132 20 chr13 57937407 57937498 -62346814 + RLTR20D LTR ERVK 401 505 0 5 1027 238 220 0 39 chr13 57937659 57937711 -62346601 + G-rich Low_complexity Low_complexity 4 53 0 5 1027 3942 92 94 0 chr13 57937917 57938451 -62345861 + MT2B2 LTR ERVL 1 584 0 5 1027 888 244 161 11 chr13 57940035 57940309 -62344003 - ORR1E LTR MaLR -41 318 4 5 1027 3942 124 20 93 chr13 57940472 57941282 -62343030 + RMER17A LTR ERVK 1 751 0 5 1027 318 331 64 82 chr13 57941617 57941897 -62342415 + ORR1E LTR MaLR 85 359 0 5 1027 198 103 0 0 chr13 57941914 57941943 -62342369 + (GAAAA)n Simple_repeat Simple_repeat 3 31 0 5 1027 1130 336 116 56 chr13 57941983 57942900 -62341412 + MTE-int LTR MaLR 58 1029 -551 5 1027 25 65 0 0 chr13 57943440 57943486 -62340826 + AT_rich Low_complexity Low_complexity 1 46 0 5 1027 24 0 0 0 chr13 57944348 57944372 -62339940 + AT_rich Low_complexity Low_complexity 1 24 0 5 1027 704 143 8 0 chr13 57945390 57945516 -62338796 + (CA)n Simple_repeat Simple_repeat 1 127 0 5 1027 272 316 38 0 chr13 57945516 57945595 -62338717 + L1M3 LINE L1 5499 5580 -588 5 1027 306 0 0 0 chr13 57945660 57945694 -62338618 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1027 219 103 0 0 chr13 57945694 57945733 -62338579 + (CTTG)n Simple_repeat Simple_repeat 1 39 0 5 1027 285 209 0 0 chr13 57945962 57946029 -62338283 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 1027 502 199 143 108 chr13 57946813 57947016 -62337296 + B3 SINE B2 1 210 -6 5 1027 28 0 0 0 chr13 57947086 57947114 -62337198 + AT_rich Low_complexity Low_complexity 1 28 0 5 1027 407 337 74 66 chr13 57947889 57948283 -62336029 - L1M5 LINE L1 -1334 4812 4416 5 1027 21 0 0 0 chr13 57948508 57948529 -62335783 + AT_rich Low_complexity Low_complexity 1 21 0 5 1027 330 326 133 0 chr13 57948785 57948920 -62335392 - L1MB8 LINE L1 -2 6176 6024 6 1027 216 97 0 0 chr13 57948926 57948957 -62335355 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1027 1881 154 0 28 chr13 57948959 57949286 -62335026 - ORR1A3 LTR MaLR -8 318 1 6 1027 198 103 0 0 chr13 57949286 57949315 -62334997 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 6 1027 320 289 64 82 chr13 57949319 57949538 -62334774 - L1MB2 LINE L1 -65 6106 5892 6 1027 360 0 0 0 chr13 57950354 57950394 -62333918 + (CAA)n Simple_repeat Simple_repeat 2 41 0 6 1027 208 323 91 30 chr13 57950617 57950716 -62333596 + MIRb SINE MIR 69 173 -95 6 1027 229 205 316 13 chr13 57950855 57950934 -62333378 + MIR SINE MIR 38 140 -68 6 1027 543 290 61 16 chr13 57952160 57952405 -62331907 - L1MA5 LINE L1 -367 5933 5678 6 1027 1293 50 87 38 chr13 57953105 57953126 -62331186 - B2_Mm2 SINE B2 0 195 159 6 1027 225 0 0 0 chr13 57953126 57953151 -62331161 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 6 1027 1293 50 87 38 chr13 57953151 57953314 -62330998 - B2_Mm2 SINE B2 -37 158 2 6 1027 2312 195 192 35 chr13 57953680 57954340 -62329972 + Lx7 LINE L1 6933 7696 0 6 1027 270 349 116 27 chr13 57955407 57955631 -62328681 + MIRb SINE MIR 15 258 -10 6 1027 206 250 67 40 chr13 57956930 57957005 -62327307 + MIR3 SINE MIR 125 201 -7 6 1027 275 275 23 68 chr13 57957512 57957650 -62326662 - L1M2 LINE L1 -421 5870 5740 6 1027 262 286 134 36 chr13 57958874 57959121 -62325191 + RMER12 LTR ERVK 718 988 -334 6 1027 349 258 30 15 chr13 57959121 57959255 -62325057 + (TATG)n Simple_repeat Simple_repeat 2 137 0 6 1027 206 287 0 9 chr13 57959256 57959372 -62324940 + (TG)n Simple_repeat Simple_repeat 1 115 0 6 1027 873 94 18 18 chr13 57959383 57959546 -62324766 + (TG)n Simple_repeat Simple_repeat 2 164 0 6 1027 482 301 34 7 chr13 57959708 57959855 -62324457 + RSINE1 SINE B4 3 153 -12 6 1027 321 277 27 82 chr13 57960319 57960429 -62323883 + ORR1E LTR MaLR 1 104 -255 6 1027 270 336 61 35 chr13 57960473 57960587 -62323725 + ORR1E LTR MaLR 262 378 -1 6 1027 216 0 0 0 chr13 57960593 57960617 -62323695 + (CA)n Simple_repeat Simple_repeat 1 24 0 6 1027 1169 173 9 28 chr13 57960628 57960842 -62323470 + B3 SINE B2 1 210 -6 6 1027 1137 86 0 0 chr13 57960878 57961018 -62323294 + B1_Mus1 SINE Alu 2 141 -7 6 1027 1020 117 0 22 chr13 57961022 57961206 -62323106 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1027 623 103 10 0 chr13 57961206 57961303 -62323009 + (GGAA)n Simple_repeat Simple_repeat 2 99 0 6 1027 833 326 163 19 chr13 57961306 57961896 -62322416 + MTE-int LTR MaLR 11 685 -895 6 1027 4926 256 65 23 chr13 57961930 57963700 -62320612 - L1_Mur3 LINE L1 -1893 3987 2144 6 1027 31 0 0 0 chr13 57964311 57964342 -62319970 + AT_rich Low_complexity Low_complexity 1 31 0 6 1027 24 67 0 0 chr13 57964353 57964398 -62319914 + AT_rich Low_complexity Low_complexity 1 45 0 6 1027 1031 237 0 9 chr13 57965662 57965879 -62318433 - B3 SINE B2 0 216 2 6 1027 191 272 82 68 chr13 57969531 57969677 -62314635 - MIR SINE MIR -67 195 48 6 1027 425 168 0 9 chr13 57971127 57971235 -62313077 + (TG)n Simple_repeat Simple_repeat 2 108 0 6 1027 301 287 25 92 chr13 57971237 57971356 -62312956 - HAL1-3A_ME LINE L1 -828 2030 1920 6 1027 181 281 45 30 chr13 57972136 57972202 -62312110 - L2 LINE L2 -375 3044 2978 6 1027 198 208 0 0 chr13 57972855 57972903 -62311409 + GA-rich Low_complexity Low_complexity 1 48 0 6 1027 316 223 184 0 chr13 57973554 57973657 -62310655 + L2a LINE L2 3304 3425 -1 6 1027 1340 68 17 0 chr13 57975725 57975901 -62308411 + B2_Mm2 SINE B2 6 184 -11 6 1027 202 264 82 103 chr13 57975928 57976025 -62308287 - MIRc SINE MIR -77 191 97 6 1027 378 350 19 38 chr13 57976123 57976334 -62307978 - MER20 DNA MER1_type -12 207 1 6 1027 335 239 28 0 chr13 57977001 57977072 -62307240 + Lx8 LINE L1 7264 7336 -137 6 1027 30 27 0 0 chr13 57977074 57977111 -62307201 + AT_rich Low_complexity Low_complexity 1 37 0 6 1027 793 246 106 27 chr13 57977157 57977345 -62306967 + B3 SINE B2 1 203 -13 6 1027 279 0 0 0 chr13 57977345 57977376 -62306936 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 1027 278 167 33 16 chr13 57977376 57977437 -62306875 + B3 SINE B2 155 216 0 6 1027 865 309 50 108 chr13 57979017 57979593 -62304719 - MLT1F2 LTR MaLR 0 560 18 6 1027 201 346 42 91 chr13 57979706 57979849 -62304463 - L2a LINE L2 -69 3357 3222 6 1027 207 139 0 0 chr13 57980516 57980552 -62303760 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 1027 182 308 14 158 chr13 57981635 57981774 -62302538 - L2c LINE L2 -2 3385 3267 6 1027 1819 141 86 11 chr13 57982498 57982925 -62301387 + RMER17C LTR ERVK 16 439 -519 6 1027 341 169 7 42 chr13 57983379 57983521 -62300791 + (TG)n Simple_repeat Simple_repeat 2 138 0 6 1027 369 75 0 0 chr13 57984797 57984850 -62299462 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 1027 207 0 0 0 chr13 57984850 57984872 -62299440 + (GA)n Simple_repeat Simple_repeat 1 23 0 6 1027 454 223 13 0 chr13 57984919 57985076 -62299236 + (TG)n Simple_repeat Simple_repeat 1 159 0 6 1027 680 153 35 12 chr13 57985157 57985586 -62298726 + (TG)n Simple_repeat Simple_repeat 1 439 0 6 1027 189 107 0 0 chr13 57985824 57985852 -62298460 + (GGGA)n Simple_repeat Simple_repeat 3 30 0 6 1027 303 309 71 13 chr13 57986652 57986806 -62297506 - L1MC4a LINE L1 -1988 5894 5732 6 1027 288 323 109 17 chr13 57987743 57987973 -62296339 + L1MC4 LINE L1 7202 7452 -590 6 1027 1154 62 0 27 chr13 57987989 57988139 -62296173 + B1_Mus1 SINE Alu 3 148 0 6 1027 189 0 0 0 chr13 57988319 57988340 -62295972 + (TAA)n Simple_repeat Simple_repeat 1 21 0 6 1027 25 0 0 0 chr13 57988583 57988608 -62295704 + AT_rich Low_complexity Low_complexity 1 25 0 6 1027 236 268 131 93 chr13 57988651 57989017 -62295295 + RMER10A LTR ERVL 12 391 -51 6 1027 368 185 65 11 chr13 57989016 57989109 -62295203 + RMER10A LTR ERVL 318 415 -27 6 1027 189 0 0 0 chr13 57989184 57989205 -62295107 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 6 1027 205 203 40 13 chr13 57989209 57989284 -62295028 + (TA)n Simple_repeat Simple_repeat 2 78 0 6 1027 239 0 32 0 chr13 57989363 57989394 -62294918 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6 1027 512 292 23 8 chr13 57989395 57989526 -62294786 - RSINE1 SINE B4 -18 147 15 6 1027 21 0 0 0 chr13 57989560 57989581 -62294731 + AT_rich Low_complexity Low_complexity 1 21 0 6 1027 1076 62 6 88 chr13 57989586 57989746 -62294566 + B1_Mus1 SINE Alu 1 147 -1 6 1027 246 274 41 0 chr13 57989914 57989987 -62294325 + ID4 SINE ID 3 78 -5 6 1027 21 0 0 0 chr13 57990754 57990775 -62293537 + GC_rich Low_complexity Low_complexity 1 21 0 6 1027 180 111 0 0 chr13 57993983 57994010 -62290302 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1027 234 140 154 39 chr13 57995049 57995101 -62289211 + L2a LINE L2 3287 3344 -82 6 1027 768 232 100 37 chr13 57995245 57995514 -62288798 + Lx8 LINE L1 7181 7466 -7 6 1027 479 267 58 0 chr13 57996876 57996996 -62287316 + RSINE1 SINE B4 11 137 -28 6 1027 519 201 0 0 chr13 57997354 57997518 -62286794 + CT-rich Low_complexity Low_complexity 1 164 0 6 1027 251 348 81 29 chr13 57997693 57997829 -62286483 + L1M5 LINE L1 5552 5694 -468 6 1027 844 244 65 0 chr13 57998569 57998770 -62285542 + B3 SINE B2 1 214 -2 6 1027 1239 80 18 0 chr13 58000555 58000718 -62283594 + B2_Mm2 SINE B2 3 168 -27 1 1027 243 0 0 0 chr13 58000721 58000748 -62283564 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1027 315 0 0 0 chr13 58000748 58000782 -62283530 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1027 820 224 74 30 chr13 58000822 58001024 -62283288 - B3 SINE B2 -1 215 5 4 1027 352 230 0 33 chr13 58002928 58003018 -62281294 + B3 SINE B2 2 88 -128 5 1027 237 336 94 8 chr13 58004297 58004414 -62279898 + MIR SINE MIR 126 252 -10 6 1027 392 293 60 26 chr13 58004897 58005048 -62279264 - Lx8 LINE L1 -192 7281 7126 7 1027 562 239 101 0 chr13 58005618 58005756 -62278556 + ID_B1 SINE B4 73 224 0 8 1027 993 103 7 20 chr13 58005951 58006100 -62278212 + B1_Mur3 SINE Alu 3 149 0 9 1027 936 179 63 68 chr13 58006986 58007208 -62277104 - URR1A DNA MER1_type -5 221 1 1 1027 354 45 0 0 chr13 58007821 58007865 -62276447 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1027 216 0 0 0 chr13 58010267 58010291 -62274021 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1027 396 0 0 0 chr13 58011488 58011532 -62272780 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1027 809 40 0 10 chr13 58011532 58011628 -62272684 - B1_Mus2 SINE Alu -10 137 42 1 1027 285 158 112 56 chr13 58011565 58011672 -62272640 - RLTR25B LTR ERVK -519 509 397 1 1027 395 0 0 163 chr13 58011721 58012152 -62272160 + (CTCTG)n Simple_repeat Simple_repeat 1 360 0 1 1027 340 52 0 94 chr13 58012154 58012218 -62272094 - B1_Mus2 SINE Alu -88 59 2 1 1027 183 294 80 80 chr13 58012947 58013084 -62271228 - MIRc SINE MIR -4 264 128 1 1027 226 394 0 11 chr13 58013939 58014034 -62270278 + L2b LINE L2 3282 3375 0 1 1027 298 0 48 0 chr13 58014110 58014152 -62270160 + (TTA)n Simple_repeat Simple_repeat 2 45 0 2 1027 356 143 0 14 chr13 58014702 58014773 -62269539 + (TG)n Simple_repeat Simple_repeat 2 71 0 2 1027 418 217 17 94 chr13 58015084 58015201 -62269111 - MLT1A1 LTR MaLR -32 376 269 2 1027 3390 57 2 2 chr13 58015385 58015791 -62268521 - MTB_Mm LTR MaLR 0 407 2 2 1027 180 77 0 0 chr13 58016139 58016165 -62268147 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 1027 281 172 0 15 chr13 58016166 58016231 -62268081 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 1027 3056 88 5 0 chr13 58016407 58016805 -62267507 + MTB LTR MaLR 1 400 0 2 1027 228 342 26 0 chr13 58017355 58017431 -62266881 + MIR SINE MIR 158 235 -27 2 1027 500 269 152 0 chr13 58018041 58018264 -62266048 - L1M3 LINE L1 -655 5516 5260 2 1027 1102 234 137 36 chr13 58019398 58019425 -62264887 - MTE2b LTR MaLR -8 371 345 2 1027 234 0 0 0 chr13 58019425 58019451 -62264861 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3 1027 1102 234 137 36 chr13 58019451 58019760 -62264552 - MTE2b LTR MaLR -35 344 2 2 1027 264 331 67 51 chr13 58019769 58019947 -62264365 - L1MA4A LINE L1 -365 5938 5758 3 1027 302 312 132 28 chr13 58020186 58020549 -62263763 + L1M5 LINE L1 5283 5683 -441 3 1027 341 280 18 61 chr13 58020692 58020806 -62263506 - LTR16A1 LTR ERVL 0 456 348 3 1027 397 308 56 7 chr13 58020802 58020824 -62263488 + ID_B1 SINE B4 70 134 -90 3 1027 414 292 10 0 chr13 58020824 58020920 -62263392 + PB1D10 SINE Alu 12 108 -9 3 1027 397 308 56 7 chr13 58020920 58020946 -62263366 + ID_B1 SINE B4 135 220 -4 3 1027 329 319 31 78 chr13 58021797 58022055 -62262257 + L1MC4a LINE L1 6672 6917 -965 3 1027 626 271 175 117 chr13 58022062 58022240 -62262072 + L1MC1 LINE L1 5764 5956 -377 3 1027 2173 131 10 0 chr13 58022240 58022546 -62261766 - RLTR27 LTR ERVK 0 309 1 3 1027 827 235 76 10 chr13 58022552 58022750 -62261562 + B3 SINE B2 5 215 -1 3 1027 626 271 175 117 chr13 58022750 58023095 -62261217 + L1MC1 LINE L1 5957 6325 -8 3 1027 1185 191 229 7 chr13 58023308 58023618 -62260694 - MTD LTR MaLR 0 419 41 4 1027 462 340 89 0 chr13 58023661 58023976 -62260336 + L1MC4a LINE L1 7168 7510 -372 3 1027 183 184 0 0 chr13 58023980 58024018 -62260294 + GA-rich Low_complexity Low_complexity 1 38 0 4 1027 252 0 0 0 chr13 58024035 58024063 -62260249 + (GA)n Simple_repeat Simple_repeat 1 28 0 4 1027 844 38 19 0 chr13 58024143 58024249 -62260063 + B2_Mm2 SINE B2 1 108 -87 4 1027 371 98 0 16 chr13 58024257 58024319 -62259993 + (GA)n Simple_repeat Simple_repeat 1 61 0 4 1027 333 0 0 0 chr13 58025361 58025398 -62258914 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1027 324 0 0 0 chr13 58025398 58025433 -62258879 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1027 778 214 66 10 chr13 58025526 58025724 -62258588 - B3 SINE B2 -7 209 1 4 1027 192 40 0 0 chr13 58026151 58026176 -62258136 + (GGTTG)n Simple_repeat Simple_repeat 5 29 0 4 1027 225 0 0 0 chr13 58026487 58026512 -62257800 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 4 1027 213 293 76 25 chr13 58027240 58027359 -62256953 - MIRb SINE MIR -140 128 4 5 1027 416 74 0 0 chr13 58027723 58027777 -62256535 - B1_Mus2 SINE Alu -80 67 14 5 1027 643 49 0 0 chr13 58027778 58027859 -62256453 + B1_Mm SINE Alu 67 147 0 5 1027 187 342 124 5 chr13 58027925 58028119 -62256193 - L2 LINE L2 -459 2960 2744 5 1027 369 194 0 0 chr13 58028229 58028239 -62256073 + (TA)n Simple_repeat Simple_repeat 1 10 0 5 1027 1201 81 0 0 chr13 58028239 58028387 -62255925 + B1_Mus1 SINE Alu 1 148 0 5 1027 369 194 0 0 chr13 58028387 58028469 -62255843 + (TA)n Simple_repeat Simple_repeat 1 82 0 5 1027 446 279 210 32 chr13 58028486 58028734 -62255578 - B4A SINE B4 0 292 1 5 1027 241 368 21 0 chr13 58028734 58028829 -62255483 - L2 LINE L2 -768 2651 2555 5 1027 1598 248 82 3 chr13 58029044 58029420 -62254892 + MTD LTR MaLR 1 406 -13 5 1027 379 241 200 18 chr13 58029561 58029726 -62254586 + L1MB3 LINE L1 5946 6140 -43 5 1027 294 95 0 0 chr13 58029728 58029770 -62254542 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1027 1215 192 9 9 chr13 58030530 58030740 -62253572 + B3 SINE B2 1 210 -6 6 1027 284 233 40 109 chr13 58030924 58030936 -62253376 + MT2B LTR ERVL 154 158 -443 6 1027 418 204 36 1 chr13 58030936 58031028 -62253284 + B1_Mus1 SINE Alu 1 101 -19 6 1027 576 0 0 0 chr13 58031035 58031099 -62253213 + (GAAA)n Simple_repeat Simple_repeat 3 66 0 6 1027 836 139 0 7 chr13 58031111 58031256 -62253056 + (GGGGA)n Simple_repeat Simple_repeat 2 145 0 6 1027 656 247 34 78 chr13 58031326 58031532 -62252780 + B3A SINE B2 1 197 -1 6 1027 188 387 74 21 chr13 58032139 58032234 -62252078 + L3b LINE CR1 368 467 -15 6 1027 911 236 132 22 chr13 58033281 58033554 -62250758 + Lx8 LINE L1 6653 6955 -518 6 1027 609 261 25 0 chr13 58033555 58033736 -62250576 + L1MC1 LINE L1 5641 5825 -519 6 1027 295 295 241 0 chr13 58033736 58033848 -62250464 + B1F SINE Alu 7 145 -4 7 1027 1418 79 21 10 chr13 58033856 58034048 -62250264 + B2_Mm2 SINE B2 1 194 -1 7 1027 4537 96 0 2 chr13 58034769 58035606 -62248706 + Lx LINE L1 5166 6001 -653 7 1027 742 68 8 17 chr13 58035607 58035726 -62248586 + Lx LINE L1 6534 6651 -3 7 1027 626 79 0 29 chr13 58035947 58036051 -62248261 + RMER17B LTR ERVK 356 456 -502 7 1027 239 73 49 0 chr13 58036057 58036098 -62248214 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 7 1027 282 270 20 137 chr13 58036737 58036883 -62247429 - MER5A1 DNA MER1_type -9 157 29 7 1027 258 299 84 18 chr13 58037009 58037176 -62247136 + L2 LINE L2 2454 2631 -788 7 1027 1247 269 74 9 chr13 58037676 58038002 -62246310 - MTE2a LTR MaLR -16 363 17 7 1027 724 179 6 6 chr13 58038118 58038275 -62246037 + CT-rich Low_complexity Low_complexity 6 162 0 7 1027 751 323 61 15 chr13 58038344 58038608 -62245704 - B4 SINE B4 0 292 17 7 1027 230 349 0 0 chr13 58040495 58040558 -62243754 - MIR SINE MIR -10 252 190 8 1027 1182 210 225 7 chr13 58040711 58041018 -62243294 - ORR1C1 LTR MaLR -4 374 1 8 1027 232 238 71 59 chr13 58041029 58041114 -62243198 + RMER21B LTR ERV1 322 407 -435 8 1027 366 324 19 0 chr13 58041547 58041652 -62242660 + PB1D10 SINE Alu 3 109 -8 8 1027 1010 122 0 6 chr13 58042217 58042398 -62241914 + (CAG)n Simple_repeat Simple_repeat 1 180 0 8 1027 418 300 220 19 chr13 58042796 58043010 -62241302 - MLT1A0 LTR MaLR -78 287 31 8 1027 2110 203 2 65 chr13 58043253 58043700 -62240612 - MTD LTR MaLR 0 419 1 8 1027 392 278 133 15 chr13 58044288 58044423 -62239889 - L2c LINE L2 0 3387 3209 8 1027 301 288 17 8 chr13 58044430 58044549 -62239763 + L1MC LINE L1 5740 5859 -2023 8 1027 1239 258 33 110 chr13 58045274 58045783 -62238529 - RLTR12B LTR ERVK -12 516 47 8 1027 201 304 91 53 chr13 58045810 58045942 -62238370 - L2a LINE L2 -3 3423 3287 9 1027 332 361 98 15 chr13 58045927 58046132 -62238180 + MIRb SINE MIR 18 239 -29 9 1027 299 85 0 21 chr13 58047929 58047977 -62236335 + (CCA)n Simple_repeat Simple_repeat 2 48 0 9 1027 282 351 29 22 chr13 58048004 58048093 -62236219 + ID_B1 SINE B4 84 169 -55 9 1027 6365 29 13 0 chr13 58048093 58048845 -62235467 + L1Md_F3 LINE L1 5809 6570 -14 9 1027 282 351 29 22 chr13 58048845 58048892 -62235420 + ID_B1 SINE B4 170 220 -4 9 1027 277 293 0 43 chr13 58048931 58049164 -62235148 + C-rich Low_complexity Low_complexity 1 223 0 9 1027 387 0 0 0 chr13 58050092 58050135 -62234177 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1027 409 285 0 64 chr13 58050373 58050482 -62233830 + ID_B1 SINE B4 79 176 -48 9 1027 553 180 0 0 chr13 58050395 58050484 -62233828 + PB1D10 SINE Alu 9 97 -20 9 1027 239 303 85 70 chr13 58050770 58051076 -62233236 + MER102c DNA MER1_type 1 322 -8 9 1027 270 246 14 0 chr13 58054087 58054156 -62230156 - MIR SINE MIR -86 176 107 1 1027 222 211 0 0 chr13 58054418 58054475 -62229837 + CT-rich Low_complexity Low_complexity 1 57 0 1 1027 2034 98 40 19 chr13 58056360 58056684 -62227628 - IAPEY_LTR LTR ERVK 0 385 55 1 1027 2616 39 3 0 chr13 58057413 58057722 -62226590 + L1_Mus1 LINE L1 6257 6566 -1 1 1027 459 52 0 0 chr13 58058021 58058079 -62226233 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 1027 225 0 0 0 chr13 58058564 58058589 -62225723 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 1027 384 261 115 60 chr13 58058651 58058851 -62225461 + HAL1 LINE L1 937 1147 -1360 1 1027 1533 249 82 35 chr13 58059288 58059688 -62224624 + MTD LTR MaLR 1 419 0 1 1027 493 308 91 77 chr13 58059760 58060122 -62224190 + HAL1 LINE L1 2021 2387 -120 1 1027 216 262 113 0 chr13 58061270 58061355 -62222957 - L2c LINE L2 -269 3118 3024 1 1027 358 179 29 182 chr13 58061539 58061676 -62222636 - RCHARR1 DNA MER1_type -32 942 827 1 1027 933 241 104 41 chr13 58061684 58061952 -62222360 + B4A SINE B4 8 292 0 1 1027 1116 229 0 17 chr13 58062057 58062293 -62222019 - RCHARR1 DNA MER1_type -161 813 582 1 1027 1564 166 34 8 chr13 58062295 58062562 -62221750 + ORR1D1 LTR MaLR 2 275 -99 1 1027 3949 151 41 11 chr13 58062785 58063443 -62220869 + RLTR33 LTR ERVK 1 678 0 1 1027 501 169 0 0 chr13 58063443 58063526 -62220786 + ORR1D1 LTR MaLR 292 374 0 1 1027 3546 152 99 12 chr13 58063530 58064208 -62220104 + RMER19A LTR ERVK 1 737 0 1 1027 1408 239 52 24 chr13 58064211 58064684 -62219628 - RCHARR1 DNA MER1_type -390 584 3 1 1028 829 238 39 21 chr13 58067533 58067736 -62216576 + B3 SINE B2 2 195 0 1 1028 260 299 89 23 chr13 58069178 58069291 -62215021 - MIRb SINE MIR -94 174 53 1 1028 190 327 53 35 chr13 58069430 58069544 -62214768 + MIR3 SINE MIR 87 202 -6 1 1028 232 282 117 9 chr13 58069610 58069721 -62214591 - MER117 DNA MER1_type -10 187 65 1 1028 456 346 88 0 chr13 58069795 58069954 -62214358 + ORR1D2 LTR MaLR 2 174 -196 1 1028 530 131 21 28 chr13 58069954 58070095 -62214217 + (TCTA)n Simple_repeat Simple_repeat 2 141 0 1 1028 803 244 33 28 chr13 58070119 58070334 -62213978 + ORR1D2 LTR MaLR 155 370 0 1 1028 191 213 64 0 chr13 58070338 58070385 -62213927 - MIR SINE MIR -55 153 104 1 1028 279 341 217 12 chr13 58070447 58070696 -62213616 - L2c LINE L2 -33 3354 3055 1 1028 363 344 201 10 chr13 58070769 58071154 -62213158 + MLT1G LTR MaLR 93 544 -11 1 1028 397 244 0 82 chr13 58072123 58072319 -62211993 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1028 363 250 0 82 chr13 58072333 58072529 -62211783 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1028 242 267 17 64 chr13 58072543 58072715 -62211597 + (CA)n Simple_repeat Simple_repeat 1 164 0 1 1028 306 221 32 45 chr13 58072730 58072886 -62211426 + (CA)n Simple_repeat Simple_repeat 1 154 0 1 1028 427 245 0 58 chr13 58072901 58073074 -62211238 + (CA)n Simple_repeat Simple_repeat 1 163 0 1 1028 326 267 0 72 chr13 58073089 58073283 -62211029 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1028 270 256 23 51 chr13 58073299 58073476 -62210836 + (CA)n Simple_repeat Simple_repeat 1 172 0 1 1028 373 216 21 88 chr13 58073522 58073715 -62210597 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1028 2102 308 61 62 chr13 58074280 58075694 -62208618 + L1MB7 LINE L1 3868 5279 -867 1 1028 605 215 103 7 chr13 58075747 58075883 -62208429 + B1_Mur1 SINE Alu 1 149 0 1 1028 1019 279 64 98 chr13 58075915 58076575 -62207737 + L1MB7 LINE L1 5353 5989 -195 1 1028 646 136 0 10 chr13 58076579 58076682 -62207630 - ORR1C2 LTR MaLR 0 384 283 1 1028 314 314 29 10 chr13 58076682 58076785 -62207527 - RLTR22_Mur LTR ERVK 0 1322 1218 1 1028 531 0 0 0 chr13 58076801 58076860 -62207452 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1028 879 212 101 47 chr13 58076888 58077147 -62207165 - RLTR22_Mur LTR ERVK -241 1081 811 1 1028 303 28 0 0 chr13 58077147 58077183 -62207129 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1028 192 77 0 0 chr13 58077183 58077208 -62207104 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1028 769 250 98 91 chr13 58077208 58077357 -62206955 - RLTR22_Mur LTR ERVK -537 1311 1163 1 1028 1533 264 72 132 chr13 58077418 58078281 -62206031 - RLTR22_Mur LTR ERVK -1037 811 1 1 1028 1076 173 170 18 chr13 58078298 58078527 -62205785 - ORR1D1 LTR MaLR -99 275 12 1 1028 302 316 51 45 chr13 58078540 58078696 -62205616 + L1MB7 LINE L1 6009 6165 -13 1 1028 322 352 109 34 chr13 58078757 58078995 -62205317 + L1MEg LINE L1 1030 1285 -4799 1 1028 23 0 0 0 chr13 58079188 58079211 -62205101 + AT_rich Low_complexity Low_complexity 1 23 0 1 1028 853 213 101 0 chr13 58079213 58079401 -62204911 - B3 SINE B2 -6 210 4 1 1028 1077 8 0 0 chr13 58079402 58079524 -62204788 + (TCTCCC)n Simple_repeat Simple_repeat 6 127 0 1 1028 189 94 0 0 chr13 58080629 58080661 -62203651 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1028 303 259 0 43 chr13 58080666 58080713 -62203599 + polypurine Low_complexity Low_complexity 6 49 0 1 1028 621 88 31 16 chr13 58080713 58080840 -62203472 + (CAGA)n Simple_repeat Simple_repeat 2 130 0 1 1028 303 259 0 43 chr13 58080840 58080909 -62203403 + polypurine Low_complexity Low_complexity 50 116 0 1 1028 302 218 0 16 chr13 58080909 58081035 -62203277 + (CAGA)n Simple_repeat Simple_repeat 2 125 0 1 1028 531 0 0 0 chr13 58081035 58081094 -62203218 + (GGAGA)n Simple_repeat Simple_repeat 3 61 0 1 1028 338 129 0 16 chr13 58081505 58081568 -62202744 + (TCCC)n Simple_repeat Simple_repeat 1 62 0 1 1028 215 328 7 141 chr13 58082047 58082196 -62202116 - MIR3 SINE MIR -10 198 70 1 1028 205 333 0 16 chr13 58082282 58082346 -62201966 + MIRm SINE MIR 89 151 -125 1 1028 642 47 0 0 chr13 58082601 58082687 -62201625 + (TG)n Simple_repeat Simple_repeat 2 87 0 1 1028 340 139 0 39 chr13 58083499 58083566 -62200746 - B2_Mm2 SINE B2 -107 109 47 1 1028 1381 74 11 0 chr13 58083607 58083783 -62200529 - B2_Mm1t SINE B2 -14 179 2 1 1028 192 49 47 47 chr13 58084660 58084703 -62199609 + (CCCCCA)n Simple_repeat Simple_repeat 5 47 0 1 1028 350 328 67 22 chr13 58084777 58084911 -62199401 - MIRb SINE MIR -103 165 26 1 1028 254 269 14 43 chr13 58085339 58085409 -62198903 - L2b LINE L2 -1 3374 3307 1 1028 214 172 47 0 chr13 58085903 58085967 -62198345 + C-rich Low_complexity Low_complexity 3 69 0 1 1028 185 0 40 0 chr13 58087172 58087197 -62197115 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1 1028 270 312 16 0 chr13 58087265 58087329 -62196983 - tRNA-Ala-GCA tRNA tRNA -7 68 4 1 1028 253 371 159 0 chr13 58087581 58087732 -62196580 + MIRb SINE MIR 35 209 -59 1 1028 984 267 63 41 chr13 58088996 58089086 -62195226 - B4A SINE B4 -6 286 204 1 1028 3332 53 2 0 chr13 58089086 58089481 -62194831 - MTA_Mm LTR MaLR 0 396 1 1 1028 984 267 63 41 chr13 58089481 58089659 -62194653 - B4A SINE B4 -89 203 12 1 1028 192 40 0 0 chr13 58089928 58089953 -62194359 + (G)n Simple_repeat Simple_repeat 1 25 0 1 1028 364 183 60 24 chr13 58090206 58090290 -62194022 - B3 SINE B2 0 216 130 1 1028 714 154 0 89 chr13 58090346 58090481 -62193831 + MT2A LTR ERVL 1 123 -410 1 1028 726 220 159 0 chr13 58090485 58090760 -62193552 + MT2A LTR ERVL 94 584 0 1 1028 13061 173 41 18 chr13 58090766 58093436 -62190876 + MERVL_2A-int LTR ERVL 7 2788 -2973 1 1028 2623 53 22 0 chr13 58093443 58093763 -62190549 - ORR1A2 LTR MaLR 0 327 1 1 1028 826 170 27 0 chr13 58093763 58093910 -62190402 + MERVL_2A-int LTR ERVL 2950 3100 -2661 1 1028 653 287 4 75 chr13 58094135 58094395 -62189917 - B4A SINE B4 -25 267 32 1 1028 244 232 48 57 chr13 58094483 58094588 -62189724 - L1M4 LINE L1 -381 5803 5700 1 1028 824 134 29 22 chr13 58094593 58094715 -62189597 + B1_Mur1 SINE Alu 11 136 -13 1 1028 207 100 0 0 chr13 58094715 58094745 -62189567 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 1 1028 824 134 29 22 chr13 58094745 58094759 -62189553 + B1_Mur1 SINE Alu 137 147 -2 1 1028 188 91 52 52 chr13 58094811 58094869 -62189443 + T-rich Low_complexity Low_complexity 1 58 0 1 1028 538 186 11 4 chr13 58094870 58094979 -62189333 - B1F2 SINE Alu -1 148 42 1 1028 340 137 0 0 chr13 58095120 58095171 -62189141 - HAL1-3A_ME LINE L1 -829 2029 1979 1 1028 371 272 126 94 chr13 58095207 58095402 -62188910 - L1M4 LINE L1 -749 5425 5201 1 1028 197 33 33 0 chr13 58095402 58095432 -62188880 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1 1028 284 267 143 106 chr13 58095432 58095454 -62188858 - L1M4 LINE L1 -946 5200 5185 1 1028 432 0 0 0 chr13 58095454 58095502 -62188810 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1028 1154 68 7 20 chr13 58095504 58095653 -62188659 - B1_Mus1 SINE Alu 0 148 2 1 1028 284 267 143 106 chr13 58095653 58095747 -62188565 - L1M4 LINE L1 -962 5184 5099 1 1028 459 0 0 0 chr13 58095752 58095803 -62188509 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 1 1028 1413 139 276 93 chr13 58095974 58096395 -62187917 + MT2A LTR ERVL 1 498 -35 1 1028 348 24 0 0 chr13 58096456 58096497 -62187815 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1028 243 0 0 0 chr13 58099125 58099152 -62185160 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 1028 1834 222 47 18 chr13 58099407 58099898 -62184414 + RMER4B LTR ERVK 17 573 -12 1 1028 222 329 102 7 chr13 58100153 58100300 -62184012 - MIRc SINE MIR -105 163 3 1 1028 675 122 0 0 chr13 58102919 58103050 -62181262 + (GA)n Simple_repeat Simple_repeat 2 132 0 1 1028 261 0 0 0 chr13 58103213 58103242 -62181070 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1028 183 42 0 0 chr13 58104263 58104287 -62180025 + (C)n Simple_repeat Simple_repeat 1 24 0 1 1028 493 302 85 56 chr13 58104699 58104969 -62179343 - B4 SINE B4 -13 279 2 1 1028 237 241 0 44 chr13 58105527 58105567 -62178745 + polypyrimidine Low_complexity Low_complexity 49 87 0 1 1028 1372 85 0 46 chr13 58105567 58105764 -62178548 - B2_Mm2 SINE B2 -7 188 1 1 1028 237 241 0 44 chr13 58105764 58105814 -62178498 + polypyrimidine Low_complexity Low_complexity 1 48 0 1 1028 270 0 0 0 chr13 58106237 58106267 -62178045 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1028 243 216 0 13 chr13 58107522 58107597 -62176715 - L1ME4a LINE L1 0 6124 6051 1 1028 279 325 61 22 chr13 58107661 58107863 -62176449 - MIRb SINE MIR 0 262 57 1 1028 339 217 0 12 chr13 58108009 58108093 -62176219 + Lx7 LINE L1 7609 7691 -5 1 1028 194 296 125 80 chr13 58109306 58109482 -62174830 + MIRb SINE MIR 49 232 -36 1 1028 244 371 19 0 chr13 58109486 58109591 -62174721 + ORR1E LTR MaLR 2 108 -251 1 1028 518 152 17 63 chr13 58109806 58109981 -62174331 + (CATATA)n Simple_repeat Simple_repeat 6 172 0 1 1028 676 193 6 17 chr13 58110004 58110183 -62174129 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 1028 180 0 0 0 chr13 58111389 58111409 -62172903 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1 1028 227 303 47 28 chr13 58112660 58112776 -62171536 + MIRc SINE MIR 64 180 -88 1 1028 471 100 0 0 chr13 58114961 58115031 -62169281 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 1028 836 184 19 0 chr13 58118847 58119005 -62165307 - B3 SINE B2 -3 213 53 1 1028 937 77 0 0 chr13 58119002 58119132 -62165180 + B1_Mus1 SINE Alu 12 141 -7 1 1028 333 68 0 0 chr13 58119134 58119178 -62165134 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 1028 590 39 0 13 chr13 58119178 58119256 -62165056 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 1 1028 324 0 0 0 chr13 58119295 58119331 -62164981 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1028 2633 58 0 0 chr13 58120960 58121287 -62163025 + ORR1A2 LTR MaLR 1 327 0 2 1028 21 0 0 0 chr13 58121304 58121325 -62162987 + GC_rich Low_complexity Low_complexity 1 21 0 2 1028 660 26 0 0 chr13 58121706 58121784 -62162528 + (TG)n Simple_repeat Simple_repeat 2 79 0 2 1028 239 332 178 24 chr13 58122021 58122234 -62162078 + MER112 DNA MER1_type 15 260 -1 2 1028 251 225 116 83 chr13 58122534 58122655 -62161657 - MER5A DNA MER1_type -40 149 25 2 1028 1304 152 0 18 chr13 58123485 58123713 -62160599 + URR1B DNA MER1_type 2 225 0 2 1028 333 284 99 0 chr13 58123770 58123851 -62160461 - PB1 SINE Alu -28 99 11 2 1028 206 327 109 8 chr13 58124861 58125067 -62159245 + MIRb SINE MIR 7 243 -25 2 1028 276 236 101 47 chr13 58126182 58126311 -62158001 + MLT1F2 LTR MaLR 65 200 -360 2 1028 484 299 118 15 chr13 58126359 58126563 -62157749 + MLT1F2 LTR MaLR 310 534 -26 2 1028 387 345 119 7 chr13 58127910 58128187 -62156125 + L1M5 LINE L1 4371 4678 -1468 2 1028 360 352 122 44 chr13 58128212 58128572 -62155740 + L1M5 LINE L1 4748 5135 -1011 2 1028 1410 282 75 58 chr13 58128616 58129319 -62154993 + L1MA8 LINE L1 5570 6284 -7 2 1028 307 353 69 19 chr13 58129466 58129625 -62154687 + L1MD LINE L1 5265 5431 -928 2 1028 343 263 151 8 chr13 58129983 58130046 -62154266 + HAL1-3A_ME LINE L1 1899 1976 -882 2 1028 669 234 25 6 chr13 58130046 58130205 -62154107 + RSINE1 SINE B4 4 165 0 2 1028 343 263 151 8 chr13 58130205 58130260 -62154052 + HAL1-3A_ME LINE L1 1977 2034 -824 2 1028 195 114 0 0 chr13 58130270 58130305 -62154007 + (CAGAGA)n Simple_repeat Simple_repeat 4 38 0 2 1028 273 187 131 102 chr13 58130475 58130612 -62153700 + MIRc SINE MIR 27 170 -106 2 1028 1942 154 64 13 chr13 58130638 58131026 -62153286 + MTC LTR MaLR 6 413 -8 2 1028 441 0 0 0 chr13 58131281 58131330 -62152982 + (GA)n Simple_repeat Simple_repeat 1 49 0 2 1028 199 167 48 0 chr13 58132109 58132151 -62152161 + MIRc SINE MIR 105 148 -120 2 1028 457 174 11 11 chr13 58132700 58132793 -62151519 + B3 SINE B2 1 93 -123 2 1028 1352 67 17 0 chr13 58134996 58135174 -62149138 + B2_Mm2 SINE B2 1 181 -14 2 1028 542 105 248 0 chr13 58135759 58135864 -62148448 + B3 SINE B2 2 132 -84 2 1028 210 118 0 0 chr13 58136270 58136304 -62148008 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2 1028 642 184 88 0 chr13 58136313 58136449 -62147863 - B1_Mur3 SINE Alu 0 149 2 2 1028 714 223 107 20 chr13 58136478 58136675 -62147637 - B3 SINE B2 0 216 3 2 1028 2903 144 93 26 chr13 58137302 58137914 -62146398 + RMER21A LTR ERV1 236 888 -59 2 1028 337 274 24 0 chr13 58138117 58138201 -62146111 + MER58A DNA MER1_type 7 92 -132 2 1028 291 292 42 0 chr13 58138869 58138965 -62145347 - MIRb SINE MIR -53 215 116 2 1028 887 216 32 61 chr13 58139264 58139575 -62144737 - Lx9 LINE L1 0 7644 7343 2 1028 26 50 0 0 chr13 58139960 58140000 -62144312 + AT_rich Low_complexity Low_complexity 1 40 0 2 1028 846 142 284 0 chr13 58140478 58140654 -62143658 + URR1A DNA MER1_type 1 226 0 2 1028 1165 132 16 11 chr13 58140891 58141082 -62143230 - B2_Mm2 SINE B2 -1 194 3 2 1028 238 337 44 11 chr13 58141695 58141785 -62142527 + PB1D7 SINE Alu 7 99 -21 2 1028 2053 283 90 36 chr13 58142226 58143002 -62141310 + Lx8 LINE L1 6236 7053 -420 2 1028 297 0 0 0 chr13 58143243 58143276 -62141036 + (TC)n Simple_repeat Simple_repeat 1 33 0 2 1028 195 42 0 0 chr13 58143276 58143299 -62141013 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 1028 1110 51 64 0 chr13 58143513 58143669 -62140643 + B2_Mm1t SINE B2 2 167 -26 2 1028 321 100 351 18 chr13 58143718 58143829 -62140483 + B2_Mm2 SINE B2 48 195 0 2 1028 1202 77 53 42 chr13 58143850 58144040 -62140272 + B2_Mm2 SINE B2 2 193 -2 2 1028 936 175 356 0 chr13 58144470 58144779 -62139533 - MTD LTR MaLR 0 419 1 2 1028 450 0 0 0 chr13 58145163 58145213 -62139099 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1028 1035 113 0 0 chr13 58145334 58145557 -62138755 + (CA)n Simple_repeat Simple_repeat 1 223 0 2 1028 226 338 192 22 chr13 58146243 58146603 -62137709 + Kanga11a DNA Tc2 1 421 -549 2 1028 1021 199 11 0 chr13 58146719 58146900 -62137412 + B3 SINE B2 1 183 -33 2 1028 318 130 145 0 chr13 58146900 58146969 -62137343 + B1_Mur1 SINE Alu 61 139 -10 2 1028 368 196 0 30 chr13 58146971 58147071 -62137241 + GA-rich Low_complexity Low_complexity 1 97 0 2 1028 239 157 20 0 chr13 58147107 58147158 -62137154 + G-rich Low_complexity Low_complexity 2 53 0 2 1028 885 217 5 37 chr13 58147201 58147388 -62136924 - B3 SINE B2 -1 215 35 2 1028 480 369 34 68 chr13 58147389 58147741 -62136571 - MTEa-int LTR MaLR -761 819 480 2 1028 990 203 56 123 chr13 58147741 58148129 -62136183 + RMER16 LTR ERVK 1 531 -2 2 1028 1162 290 77 27 chr13 58148137 58148163 -62136149 - MTEa-int LTR MaLR -1110 470 441 2 1028 198 0 0 0 chr13 58148163 58148185 -62136127 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 1028 1162 290 77 27 chr13 58148185 58148598 -62135714 - MTEa-int LTR MaLR -1140 440 9 2 1028 933 253 90 59 chr13 58148595 58148952 -62135360 - MTEa LTR MaLR -9 370 3 2 1028 276 77 0 0 chr13 58149161 58149200 -62135112 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2 1028 243 152 65 0 chr13 58149218 58149264 -62135048 - tRNA-Ser-AGY tRNA tRNA -34 51 3 2 1028 830 201 82 5 chr13 58149516 58149693 -62134619 + B3 SINE B2 1 188 -28 2 1028 270 0 0 0 chr13 58149693 58149723 -62134589 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1028 830 201 82 5 chr13 58149723 58149740 -62134572 + B3 SINE B2 189 209 -7 2 1028 342 0 0 0 chr13 58149887 58149925 -62134387 + (TC)n Simple_repeat Simple_repeat 2 39 0 2 1028 225 0 0 0 chr13 58149925 58149949 -62134363 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1028 248 200 14 0 chr13 58149958 58150028 -62134284 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1028 390 257 29 10 chr13 58150028 58150130 -62134182 + RMER5 LTR ERV1 401 504 -30 2 1028 228 330 0 54 chr13 58150181 58150274 -62134038 - MIR SINE MIR -74 188 101 2 1028 1063 159 119 32 chr13 58150428 58150681 -62133631 - MTC LTR MaLR -42 379 105 2 1028 2158 164 43 5 chr13 58150681 58151073 -62133239 + RMER1B Other Other 635 1041 -25 2 1028 488 264 39 0 chr13 58151073 58151202 -62133110 - MTC LTR MaLR -287 134 1 2 1028 516 14 41 0 chr13 58151582 58151655 -62132657 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 1028 210 143 0 0 chr13 58152316 58152351 -62131961 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1028 1240 90 22 6 chr13 58153722 58153900 -62130412 + B2_Mm2 SINE B2 1 181 -14 2 1028 315 0 0 0 chr13 58153914 58153949 -62130363 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1028 531 242 54 54 chr13 58153949 58154115 -62130197 - B3 SINE B2 -50 166 1 2 1028 282 312 23 15 chr13 58155349 58155479 -62128833 + GA-rich Low_complexity Low_complexity 4 134 0 2 1028 851 235 55 0 chr13 58155577 58155777 -62128535 + B3 SINE B2 6 216 0 2 1028 296 267 27 14 chr13 58156060 58156167 -62128145 - PB1D10 SINE Alu -3 114 9 2 1028 3147 58 2 0 chr13 58157079 58157478 -62126834 + MTB LTR MaLR 1 400 0 2 1028 307 340 21 21 chr13 58157882 58158026 -62126286 - MIRb SINE MIR -98 170 27 2 1028 945 190 15 30 chr13 58158063 58158264 -62126048 + B3 SINE B2 2 199 -17 2 1028 512 211 50 100 chr13 58158515 58158661 -62125651 + ORR1D2 LTR MaLR 2 135 -235 2 1028 279 173 0 0 chr13 58159314 58159366 -62124946 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1028 375 41 0 0 chr13 58159991 58160040 -62124272 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1028 546 202 40 8 chr13 58160412 58160537 -62123775 + RSINE1 SINE B4 16 144 -21 2 1028 263 67 44 0 chr13 58160652 58160697 -62123615 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 2 1028 796 224 81 5 chr13 58160800 58160997 -62123315 + B3 SINE B2 1 212 -4 2 1028 1059 185 18 32 chr13 58161287 58161505 -62122807 - B3 SINE B2 0 216 2 2 1028 305 273 45 62 chr13 58164382 58164558 -62119754 - B2_Mm2 SINE B2 -6 189 17 2 1028 429 202 60 60 chr13 58164635 58164751 -62119561 - PB1D10 SINE Alu -1 116 1 2 1028 255 291 0 0 chr13 58164951 58165006 -62119306 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1028 444 19 0 0 chr13 58165228 58165281 -62119031 + (GA)n Simple_repeat Simple_repeat 1 53 0 2 1028 1356 214 272 58 chr13 58165848 58166300 -62118012 + RMER15 LTR ERVL 27 575 0 2 1028 206 366 40 0 chr13 58166449 58166550 -62117762 - L2a LINE L2 -35 3391 3287 2 1028 211 301 80 11 chr13 58169181 58169312 -62115000 + MIRc SINE MIR 4 148 -120 2 1028 1452 74 21 0 chr13 58169460 58169650 -62114662 + B2_Mm2 SINE B2 2 195 0 2 1028 221 305 156 19 chr13 58170542 58170696 -62113616 - MIRb SINE MIR -35 233 59 2 1028 24 0 0 0 chr13 58171092 58171116 -62113196 + AT_rich Low_complexity Low_complexity 1 24 0 2 1028 704 189 37 22 chr13 58171240 58171375 -62112937 + B1_Mur1 SINE Alu 7 143 -6 2 1028 1679 143 80 57 chr13 58172263 58172664 -62111648 + RMER17C LTR ERVK 1 410 0 2 1028 210 347 52 116 chr13 58173378 58173645 -62110667 - MIRb SINE MIR -6 262 10 2 1028 323 284 83 69 chr13 58174104 58174248 -62110064 - Lx9 LINE L1 -156 7488 7343 2 1028 345 172 0 0 chr13 58174271 58174335 -62109977 + CT-rich Low_complexity Low_complexity 2 65 0 2 1028 630 272 93 32 chr13 58174349 58174596 -62109716 - Lx9 LINE L1 -310 7334 7073 2 1028 1055 304 21 50 chr13 58175918 58176295 -62108017 + RCHARR1 DNA MER1_type 132 497 -477 2 1028 232 236 146 0 chr13 58176312 58176401 -62107911 + L1M2 LINE L1 5187 5288 -855 2 1028 215 302 0 31 chr13 58176403 58176468 -62107844 + RSINE1 SINE B4 19 81 -84 2 1028 273 268 105 174 chr13 58176550 58176722 -62107590 + B4 SINE B4 133 292 0 2 1028 789 150 0 28 chr13 58176733 58176911 -62107401 + (CATA)n Simple_repeat Simple_repeat 4 176 0 2 1028 424 316 175 15 chr13 58177041 58177440 -62106872 + L1_Rod LINE L1 5384 5846 -1 2 1028 477 0 0 0 chr13 58177464 58177517 -62106795 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1028 835 232 75 224 chr13 58177752 58178180 -62106132 + RCHARR1 DNA MER1_type 478 841 -133 2 1028 560 252 21 21 chr13 58178180 58178257 -62106055 + ID SINE ID 2 78 -146 3 1028 259 339 41 50 chr13 58178257 58178378 -62105934 + PB1D7 SINE Alu 1 120 0 3 1028 276 306 213 15 chr13 58178614 58178750 -62105562 + RSINE1 SINE B4 3 165 0 3 1028 288 0 0 0 chr13 58178880 58178912 -62105400 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1028 511 292 78 28 chr13 58178940 58179081 -62105231 - RSINE1 SINE B4 -17 148 1 3 1028 503 145 48 0 chr13 58179696 58179779 -62104533 - PB1D7 SINE Alu 0 120 34 3 1028 459 98 6 75 chr13 58180322 58180418 -62103894 + B1_Mur4 SINE Alu 57 150 0 3 1028 363 242 98 11 chr13 58180473 58180565 -62103747 - RSINE1 SINE B4 -33 132 33 3 1028 379 315 74 20 chr13 58180655 58180804 -62103508 + RSINE1 SINE B4 9 165 0 3 1028 198 349 45 62 chr13 58180854 58181031 -62103281 - L2 LINE L2 -542 2877 2704 3 1028 183 42 0 0 chr13 58181511 58181535 -62102777 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1028 229 312 41 20 chr13 58181750 58181848 -62102464 + MIRc SINE MIR 120 219 -49 3 1028 425 215 0 53 chr13 58182016 58182203 -62102109 + (CACCAT)n Simple_repeat Simple_repeat 1 177 0 3 1028 578 277 56 56 chr13 58182478 58182586 -62101726 + B3A SINE B2 3 113 -85 3 1028 183 42 0 0 chr13 58182586 58182610 -62101702 + (G)n Simple_repeat Simple_repeat 1 24 0 3 1028 578 277 56 56 chr13 58182610 58182696 -62101616 + B3A SINE B2 114 197 -1 3 1028 1150 168 5 54 chr13 58183448 58183669 -62100643 + B3 SINE B2 1 210 -6 3 1028 228 167 0 94 chr13 58184828 58184881 -62099431 - MLT2D LTR ERVL -140 420 373 3 1028 2077 112 14 0 chr13 58185314 58185609 -62098703 - ORR1A2 LTR MaLR -28 299 1 3 1028 211 333 46 84 chr13 58186962 58187093 -62097219 + PB1 SINE Alu 1 126 -1 3 1028 180 0 0 0 chr13 58187191 58187211 -62097101 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 1028 523 215 0 27 chr13 58187217 58187282 -62097030 + B4 SINE B4 24 85 -207 3 1028 263 288 88 0 chr13 58187282 58187362 -62096950 + B1_Mur3 SINE Alu 1 87 -62 3 1028 1511 258 141 61 chr13 58187338 58187616 -62096696 + RMER17B LTR ERVK 5 266 -692 3 1028 1235 61 0 0 chr13 58187616 58187764 -62096548 + B1_Mus1 SINE Alu 1 148 0 3 1028 1511 252 95 119 chr13 58187764 58188402 -62095910 + RMER17B LTR ERVK 264 899 -9 3 1028 467 252 9 78 chr13 58188414 58188530 -62095782 + B4A SINE B4 125 232 -60 3 1028 1315 295 43 2 chr13 58188607 58189073 -62095239 + Lx8 LINE L1 6657 7141 -332 3 1028 302 220 0 74 chr13 58189115 58189223 -62095089 + Lx8 LINE L1 7373 7472 -1 3 1028 208 320 66 88 chr13 58189356 58189405 -62094907 + L2c LINE L2 3254 3300 -87 3 1028 3107 66 32 5 chr13 58189405 58189815 -62094497 - BGLII LTR ERVK 0 421 1 3 1028 208 320 66 88 chr13 58189815 58189902 -62094410 + L2c LINE L2 3301 3387 0 3 1028 554 158 24 95 chr13 58189945 58190071 -62094241 + PB1D10 SINE Alu 1 117 0 3 1028 954 140 204 0 chr13 58190090 58190276 -62094036 + URR1B DNA MER1_type 1 224 -1 3 1028 309 312 0 0 chr13 58190276 58190356 -62093956 + ID4_ SINE ID 3 82 -1 3 1028 334 299 59 82 chr13 58190544 58191052 -62093260 + L1M4 LINE L1 5007 5524 -656 3 1028 295 267 30 16 chr13 58191324 58191418 -62092894 + PB1D10 SINE Alu 16 115 -5 3 1028 596 288 198 32 chr13 58191419 58191667 -62092645 + B4 SINE B4 2 290 -2 3 1028 23 0 0 0 chr13 58191731 58191754 -62092558 + AT_rich Low_complexity Low_complexity 1 23 0 3 1028 435 167 28 9 chr13 58191862 58191971 -62092341 + GA-rich Low_complexity Low_complexity 2 112 0 3 1028 191 341 36 12 chr13 58192489 58192572 -62091740 + L2a LINE L2 3300 3384 -42 3 1028 337 265 58 50 chr13 58192718 58192857 -62091455 - MIRc SINE MIR -82 186 47 3 1028 1197 172 14 19 chr13 58193153 58193361 -62090951 - B3 SINE B2 -1 215 9 3 1028 396 0 0 0 chr13 58193578 58193622 -62090690 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1028 540 221 0 0 chr13 58194274 58194423 -62089889 + (TG)n Simple_repeat Simple_repeat 2 150 0 3 1028 248 240 15 30 chr13 58194438 58194571 -62089741 + (TATATG)n Simple_repeat Simple_repeat 4 134 0 3 1028 669 238 0 0 chr13 58194588 58195026 -62089286 + (TG)n Simple_repeat Simple_repeat 1 438 0 3 1028 519 222 0 0 chr13 58195059 58195212 -62089100 + (TG)n Simple_repeat Simple_repeat 1 153 0 3 1028 507 249 121 20 chr13 58195261 58195410 -62088902 + RSINE1 SINE B4 2 164 -1 3 1028 194 174 22 0 chr13 58195492 58195538 -62088774 + (CATA)n Simple_repeat Simple_repeat 4 50 0 3 1029 210 317 62 79 chr13 58196782 58196960 -62087352 + MIRc SINE MIR 44 218 -50 3 1029 534 203 24 19 chr13 58197616 58197751 -62086561 + B3 SINE B2 74 211 -5 3 1029 631 96 0 0 chr13 58197774 58197857 -62086455 + B2_Mm2 SINE B2 9 91 -104 3 1029 245 194 0 16 chr13 58197884 58197947 -62086365 + (CAAA)n Simple_repeat Simple_repeat 3 64 0 3 1029 1326 56 61 11 chr13 58198103 58198270 -62086042 + B2_Mm2 SINE B2 3 180 -15 3 1029 552 30 0 0 chr13 58198270 58198336 -62085976 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 3 1029 1326 56 61 11 chr13 58198336 58198348 -62085964 + B2_Mm2 SINE B2 181 191 -4 3 1029 318 50 0 0 chr13 58198460 58198500 -62085812 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1029 372 316 94 23 chr13 58198500 58198808 -62085504 - L1M5 LINE L1 -1318 4828 4499 3 1029 721 249 34 17 chr13 58198859 58199035 -62085277 - B3A SINE B2 -19 179 1 3 1029 757 207 39 39 chr13 58199331 58199512 -62084800 + B3A SINE B2 2 182 -16 3 1029 372 281 11 11 chr13 58199544 58199634 -62084678 - PB1D10 SINE Alu -27 90 1 3 1029 834 238 27 45 chr13 58199727 58199947 -62084365 - B3 SINE B2 0 216 1 3 1029 619 221 61 0 chr13 58200198 58200329 -62083983 + B1F SINE Alu 1 139 -10 3 1029 253 292 0 0 chr13 58200333 58200398 -62083914 + G-rich Low_complexity Low_complexity 3 67 0 3 1029 513 0 0 0 chr13 58200465 58200522 -62083790 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 3 1029 384 293 91 40 chr13 58201284 58201483 -62082829 - RMER12 LTR ERVK -344 978 770 3 1029 212 319 21 0 chr13 58201486 58201580 -62082732 + (CATA)n Simple_repeat Simple_repeat 3 98 0 3 1029 688 220 106 58 chr13 58202249 58202437 -62081875 + B3A SINE B2 2 198 0 3 1029 1136 79 0 0 chr13 58202547 58202687 -62081625 + B1_Mus1 SINE Alu 1 140 -8 3 1029 1447 62 17 0 chr13 58202714 58202891 -62081421 + B2_Mm2 SINE B2 2 181 -14 3 1029 29 0 0 0 chr13 58202922 58202951 -62081361 + AT_rich Low_complexity Low_complexity 1 29 0 3 1029 2230 153 43 11 chr13 58203364 58203734 -62080578 + RLTR14 LTR ERV1 1 382 0 3 1029 802 172 20 46 chr13 58203995 58204136 -62080176 + B1_Mus1 SINE Alu 1 140 -8 3 1029 351 0 0 0 chr13 58204136 58204175 -62080137 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 1029 528 242 211 0 chr13 58206182 58206343 -62077969 + B3 SINE B2 5 199 -17 3 1029 198 0 0 0 chr13 58206348 58206370 -62077942 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 3 1029 252 278 164 16 chr13 58206676 58206804 -62077508 - MIR SINE MIR -6 256 110 3 1029 468 0 0 0 chr13 58206920 58206972 -62077340 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1029 1090 217 19 0 chr13 58207234 58207446 -62076866 + B3 SINE B2 1 216 0 3 1029 3215 202 69 118 chr13 58207479 58208097 -62076215 - RMER19B LTR ERVK -2 900 359 3 1029 971 99 49 21 chr13 58208097 58208241 -62076071 - B1_Mus1 SINE Alu 0 148 1 3 1029 3215 202 69 118 chr13 58208241 58208569 -62075743 - RMER19B LTR ERVK -544 358 1 3 1029 476 68 14 0 chr13 58209557 58209630 -62074682 + (TG)n Simple_repeat Simple_repeat 2 75 0 3 1029 255 319 147 6 chr13 58209695 58209865 -62074447 - L1MB3 LINE L1 -75 6108 5915 3 1029 1048 110 23 47 chr13 58210290 58210462 -62073850 + B2_Mm2 SINE B2 2 169 -26 3 1029 351 0 0 0 chr13 58210465 58210504 -62073808 + (TAA)n Simple_repeat Simple_repeat 2 40 0 3 1029 900 139 13 59 chr13 58210505 58210658 -62073654 + B1_Mus2 SINE Alu 2 147 0 3 1029 246 128 0 0 chr13 58210702 58210741 -62073571 + (CAA)n Simple_repeat Simple_repeat 1 39 0 3 1029 252 362 88 83 chr13 58210973 58211178 -62073134 - MIR SINE MIR -46 216 11 3 1029 675 310 43 89 chr13 58211594 58212153 -62072159 + Lx8 LINE L1 6940 7472 -1 3 1029 577 198 141 0 chr13 58212369 58212490 -62071822 + B1_Mur3 SINE Alu 1 138 -11 3 1029 1051 137 76 85 chr13 58213154 58213377 -62070935 + URR1B DNA MER1_type 5 225 0 3 1029 188 43 42 42 chr13 58215676 58215711 -62068601 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 3 1029 1616 42 0 0 chr13 58215711 58215903 -62068409 - B2_Mm1t SINE B2 0 193 2 3 1029 188 43 42 42 chr13 58215903 58215915 -62068397 + (TTTG)n Simple_repeat Simple_repeat 2 14 0 3 1029 235 208 24 122 chr13 58217814 58217896 -62066416 + RLTR25B LTR ERVK 425 498 -530 3 1029 789 117 0 0 chr13 58217828 58217939 -62066373 + B1_Mur3 SINE Alu 33 143 -6 3 1029 568 257 129 17 chr13 58217977 58218155 -62066157 + B3A SINE B2 1 198 0 3 1029 292 68 21 64 chr13 58218482 58218529 -62065783 + B2_Mm2 SINE B2 28 72 -123 3 1029 230 116 23 0 chr13 58219381 58219424 -62064888 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 3 1029 1222 56 0 0 chr13 58219424 58219568 -62064744 - B1_Mus1 SINE Alu 0 148 5 3 1029 374 250 12 0 chr13 58219638 58219718 -62064594 + B1F SINE Alu 69 149 0 3 1029 314 50 0 0 chr13 58220121 58220161 -62064151 + B2_Mm2 SINE B2 1 40 -155 3 1029 1219 56 7 0 chr13 58220164 58220308 -62064004 + B1_Mus2 SINE Alu 3 147 0 3 1029 521 253 179 13 chr13 58220344 58220500 -62063812 - B3A SINE B2 -16 182 1 3 1029 374 235 35 0 chr13 58220503 58220588 -62063724 - PB1D10 SINE Alu 0 117 30 3 1029 614 238 0 34 chr13 58220654 58220802 -62063510 + B1F2 SINE Alu 4 146 -3 4 1029 219 69 0 0 chr13 58221010 58221039 -62063273 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1029 1201 43 0 0 chr13 58221039 58221177 -62063135 - B1_Mus1 SINE Alu -9 139 2 4 1029 495 119 31 16 chr13 58221926 58222054 -62062258 + (CA)n Simple_repeat Simple_repeat 1 130 0 4 1029 297 0 0 0 chr13 58222054 58222087 -62062225 + (TC)n Simple_repeat Simple_repeat 1 33 0 4 1029 726 127 33 0 chr13 58222087 58222299 -62062013 + (CA)n Simple_repeat Simple_repeat 1 218 0 4 1029 248 313 0 15 chr13 58222302 58222370 -62061942 - MER77 LTR ERVL 0 607 541 4 1029 356 86 0 0 chr13 58222450 58222508 -62061804 + B2_Mm1t SINE B2 133 190 -3 4 1029 1278 107 21 0 chr13 58222513 58222700 -62061612 + B2_Mm1t SINE B2 3 193 0 4 1029 450 294 135 5 chr13 58222704 58222889 -62061423 - MER68 LTR ERVL -346 217 9 4 1029 258 222 123 14 chr13 58223033 58223106 -62061206 + L2 LINE L2 2777 2857 -562 4 1029 363 236 72 11 chr13 58223107 58223237 -62061075 + B1F1 SINE Alu 11 149 0 4 1029 368 170 16 29 chr13 58223292 58223371 -62060941 - MTD LTR MaLR -14 407 296 4 1029 649 224 100 43 chr13 58223383 58223593 -62060719 - MTD LTR MaLR -180 239 18 4 1029 224 267 122 19 chr13 58223610 58223717 -62060595 + L2 LINE L2 2877 2994 -425 4 1029 632 265 30 27 chr13 58224066 58224261 -62060051 - B3 SINE B2 -6 210 8 4 1029 368 182 31 83 chr13 58225018 58225114 -62059198 + PB1D9 SINE Alu 27 117 -3 4 1029 361 240 104 0 chr13 58225461 58225557 -62058755 + B1F2 SINE Alu 23 128 -21 4 1029 307 297 44 0 chr13 58225999 58226090 -62058222 + B3A SINE B2 74 168 -30 4 1029 232 202 0 33 chr13 58228765 58228857 -62055455 + (CCG)n Simple_repeat Simple_repeat 3 91 0 4 1029 325 215 0 39 chr13 58228942 58229097 -62055215 + (CCG)n Simple_repeat Simple_repeat 3 151 0 4 1029 31 26 0 0 chr13 58229097 58229135 -62055177 + GC_rich Low_complexity Low_complexity 1 38 0 4 1029 21 71 0 0 chr13 58229676 58229718 -62054594 + GC_rich Low_complexity Low_complexity 1 42 0 4 1029 29 28 0 0 chr13 58229757 58229793 -62054519 + GC_rich Low_complexity Low_complexity 1 36 0 4 1029 29 0 0 0 chr13 58230134 58230163 -62054149 + GC_rich Low_complexity Low_complexity 1 29 0 4 1029 1835 178 60 33 chr13 58231236 58231603 -62052709 - MTC LTR MaLR -44 377 1 4 1029 584 176 209 33 chr13 58231658 58231811 -62052501 + B3A SINE B2 3 182 -16 4 1029 1003 112 0 47 chr13 58231824 58231993 -62052319 - B2_Mm2 SINE B2 -8 187 27 4 1029 324 288 27 0 chr13 58231993 58232066 -62052246 - L1MEg LINE L1 -4137 1947 1873 4 1029 1230 55 0 0 chr13 58232082 58232228 -62052084 - B1_Mus1 SINE Alu 0 148 3 4 1029 324 73 0 0 chr13 58232230 58232271 -62052041 - B2_Mm2 SINE B2 -153 42 2 4 1029 530 190 60 0 chr13 58232434 58232534 -62051778 - B3 SINE B2 -109 107 2 4 1029 309 366 50 0 chr13 58232674 58232895 -62051417 - Lx8 LINE L1 -181 7292 7061 4 1029 963 134 202 5 chr13 58233884 58234072 -62050240 + URR1B DNA MER1_type 1 225 0 4 1029 1075 212 76 115 chr13 58234129 58234591 -62049721 + RMER15 LTR ERVL 1 535 -40 4 1029 435 228 143 24 chr13 58235381 58235507 -62048805 - B1_Mur2 SINE Alu 0 149 9 4 1029 389 276 56 19 chr13 58235515 58235618 -62048694 + MTEa LTR MaLR 2 108 -271 4 1029 1115 281 59 113 chr13 58235618 58235696 -62048616 + RMER19C LTR ERVK 2 70 -541 4 1029 960 89 89 0 chr13 58235696 58235831 -62048481 - B1_Mus1 SINE Alu -1 147 1 4 1029 1115 279 89 146 chr13 58235831 58236367 -62047945 + RMER19C LTR ERVK 71 720 -182 4 1029 1015 101 127 0 chr13 58236367 58236525 -62047787 - B2_Mm1t SINE B2 -14 179 2 4 1029 725 209 96 18 chr13 58236525 58236672 -62047640 + RMER19C LTR ERVK 433 585 -26 4 1029 486 0 0 0 chr13 58236672 58236726 -62047586 + (TG)n Simple_repeat Simple_repeat 2 55 0 4 1029 725 209 96 18 chr13 58236726 58236744 -62047568 + RMER19C LTR ERVK 586 610 -1 4 1029 585 269 91 30 chr13 58236744 58236940 -62047372 + MTEa LTR MaLR 102 309 -70 4 1029 827 143 86 2 chr13 58237137 58237300 -62047012 + ORR1D1 LTR MaLR 2 181 -203 4 1029 261 163 41 0 chr13 58237292 58237341 -62046971 + ORR1D1 LTR MaLR 320 370 -14 4 1029 1107 249 48 93 chr13 58237310 58237353 -62046959 - MTD LTR MaLR -4 403 362 4 1029 1139 69 14 0 chr13 58237353 58237498 -62046814 + B1_Mus1 SINE Alu 2 148 0 4 1029 1609 221 30 33 chr13 58237498 58237871 -62046441 - MTD LTR MaLR -45 374 6 4 1029 342 0 0 0 chr13 58238021 58238059 -62046253 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1029 1183 41 0 39 chr13 58238074 58238227 -62046085 - B1_Mm SINE Alu 0 147 1 4 1029 1965 150 30 83 chr13 58238369 58238776 -62045536 - ORR1B1 LTR MaLR -1 393 9 4 1029 1061 247 18 47 chr13 58238750 58239026 -62045286 - MT2B LTR ERVL -46 555 288 4 1029 324 70 0 0 chr13 58239026 58239069 -62045243 + U2 snRNA snRNA 1 43 -145 4 1029 331 280 32 83 chr13 58239085 58239230 -62045082 - L1M5 LINE L1 -710 5469 5323 4 1029 1247 75 81 0 chr13 58239230 58239403 -62044909 - B2_Mm1t SINE B2 -6 187 1 4 1029 331 336 29 66 chr13 58239403 58239569 -62044743 - L1M5 LINE L1 -824 5322 5167 4 1029 235 173 322 91 chr13 58239573 58239602 -62044710 - B2_Mm2 SINE B2 0 195 174 4 1029 1282 41 0 0 chr13 58239602 58239749 -62044563 + B1_Mus1 SINE Alu 1 147 -1 4 1029 235 173 322 91 chr13 58239749 58239840 -62044472 - B2_Mm2 SINE B2 -22 173 47 4 1029 1037 113 77 0 chr13 58239887 58240055 -62044257 - B2_Mm2 SINE B2 -14 181 1 4 1029 845 166 121 0 chr13 58240475 58240632 -62043680 + ORR1D1 LTR MaLR 197 372 -2 4 1029 188 100 25 0 chr13 58240637 58240677 -62043635 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 4 1029 789 209 0 0 chr13 58240684 58240823 -62043489 + B1_Mus2 SINE Alu 3 141 -6 4 1029 536 171 0 0 chr13 58241046 58241134 -62043178 - B1_Mur3 SINE Alu -10 139 52 4 1029 504 150 264 7 chr13 58241156 58241304 -62043008 - Lx9 LINE L1 -160 7484 7299 4 1029 522 168 122 0 chr13 58241325 58241432 -62042880 - B2_Mm2 SINE B2 -1 194 75 4 1029 3249 104 7 0 chr13 58241432 58241865 -62042447 - RLTR10C LTR ERVK 0 436 1 4 1029 23165 60 3 2 chr13 58241865 58245181 -62039131 - MMERVK10C-int LTR ERVK 0 7680 4335 4 1029 20888 65 8 8 chr13 58245178 58247939 -62036373 - MMERVK10C-int LTR ERVK -4595 2986 225 4 1029 254 241 0 18 chr13 58247939 58247994 -62036318 - RLTR27 LTR ERVK -34 275 222 4 1029 365 22 0 0 chr13 58247994 58248039 -62036273 - MMERVK10C-int LTR ERVK -7488 93 49 4 1029 2716 111 29 130 chr13 58248044 58248529 -62035783 - RLTR10C LTR ERVK 0 436 1 4 1029 494 188 0 12 chr13 58248529 58248609 -62035703 - B2_Mm2 SINE B2 -115 80 1 4 1029 956 229 128 117 chr13 58248698 58249111 -62035201 - RMER4A LTR ERVK -7 459 40 4 1029 1315 47 94 0 chr13 58249111 58249281 -62035031 - B2_Mm2 SINE B2 -9 186 1 4 1029 956 229 128 117 chr13 58249281 58249321 -62034991 - RMER4A LTR ERVK -427 39 1 4 1029 388 294 177 43 chr13 58249421 58249748 -62034564 + L1MC4 LINE L1 3139 3414 -2797 4 1029 550 164 198 76 chr13 58250392 58250564 -62033748 - B2_Mm2 SINE B2 -1 194 2 4 1029 369 0 0 0 chr13 58250571 58250612 -62033700 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1029 763 246 25 39 chr13 58250612 58250804 -62033508 - B4 SINE B4 -98 194 5 4 1029 847 297 74 0 chr13 58250811 58251094 -62033218 + MLT1B LTR MaLR 85 388 -2 4 1029 324 217 163 0 chr13 58251257 58251349 -62032963 - B3 SINE B2 -108 108 2 4 1029 23 0 0 0 chr13 58251444 58251467 -62032845 + AT_rich Low_complexity Low_complexity 1 23 0 4 1029 305 47 0 23 chr13 58251479 58251523 -62032789 + (TTTTC)n Simple_repeat Simple_repeat 3 45 0 4 1029 972 110 0 33 chr13 58251524 58251674 -62032638 - B1_Mus1 SINE Alu 0 148 4 4 1029 435 208 17 109 chr13 58251571 58251690 -62032622 - MT2B LTR ERVL -344 257 150 4 1029 221 232 145 0 chr13 58252036 58252105 -62032207 + ID4 SINE ID 3 81 -2 4 1029 333 268 19 6 chr13 58252406 58252540 -62031772 - B3 SINE B2 -7 209 2 4 1029 867 152 0 8 chr13 58252702 58252835 -62031477 + B1_Mus2 SINE Alu 14 145 -2 4 1029 609 163 370 7 chr13 58252895 58253049 -62031263 + B3 SINE B2 3 212 -4 4 1029 1145 62 7 7 chr13 58253084 58253231 -62031081 + B1_Mm SINE Alu 1 147 0 4 1029 499 165 12 0 chr13 58253264 58253349 -62030963 - PB1D9 SINE Alu -16 104 19 4 1029 288 250 95 200 chr13 58253349 58253470 -62030842 - ID_B1 SINE B4 -29 191 8 4 1029 486 158 34 184 chr13 58253571 58253718 -62030594 + B1_Mur4 SINE Alu 26 150 0 4 1029 1234 41 7 0 chr13 58254113 58254259 -62030053 - B1_Mus1 SINE Alu 0 148 2 4 1029 3404 40 12 0 chr13 58254294 58254695 -62029617 + MTB_Mm LTR MaLR 2 407 0 4 1029 1325 222 64 97 chr13 58254794 58255187 -62029125 + RLTR14 LTR ERV1 1 380 -2 4 1029 287 183 28 0 chr13 58255675 58255746 -62028566 + GA-rich Low_complexity Low_complexity 4 76 0 4 1029 1467 67 5 35 chr13 58255804 58256005 -62028307 - B2_Mm2 SINE B2 0 195 1 4 1029 901 169 70 43 chr13 58256039 58256224 -62028088 - B2_Mm2 SINE B2 -5 190 1 4 1029 337 258 53 53 chr13 58256408 58256502 -62027810 + B3A SINE B2 94 187 -29 4 1029 23 92 0 0 chr13 58256510 58256575 -62027737 + AT_rich Low_complexity Low_complexity 1 65 0 4 1029 382 287 138 38 chr13 58256739 58256978 -62027334 - L2 LINE L2 -788 2631 2369 4 1029 1096 58 161 0 chr13 58256997 58257152 -62027160 + B2_Mm2 SINE B2 2 181 -14 4 1029 387 106 0 5 chr13 58257180 58257245 -62027067 + B2_Mm2 SINE B2 47 109 -107 4 1029 267 152 0 0 chr13 58257390 58257436 -62026876 + GA-rich Low_complexity Low_complexity 3 48 0 4 1029 1105 218 24 0 chr13 58257533 58257739 -62026573 + B3 SINE B2 1 211 -5 4 1029 485 247 183 5 chr13 58257763 58257954 -62026358 + L1M4 LINE L1 5461 5685 -499 4 1029 567 211 157 17 chr13 58257964 58258142 -62026170 + B3 SINE B2 1 203 -13 4 1029 416 105 76 14 chr13 58258658 58258803 -62025509 + GA-rich Low_complexity Low_complexity 1 154 0 4 1029 306 0 0 0 chr13 58259667 58259701 -62024611 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1029 703 242 77 21 chr13 58260066 58260260 -62024052 - B3 SINE B2 -8 208 4 4 1029 411 212 0 12 chr13 58260353 58260439 -62023873 + Lx7 LINE L1 7234 7318 -378 4 1029 198 0 0 0 chr13 58260561 58260583 -62023729 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 5 1029 887 153 13 34 chr13 58260586 58260735 -62023577 - B1_Mus2 SINE Alu -1 146 1 5 1029 394 241 17 51 chr13 58260894 58261012 -62023300 - PB1D9 SINE Alu -6 114 1 5 1029 992 231 129 35 chr13 58261902 58262243 -62022069 - ORR1D1 LTR MaLR -1 373 1 5 1029 1987 121 41 16 chr13 58262613 58262931 -62021381 + ORR1A3 LTR MaLR 1 326 0 5 1029 699 214 49 19 chr13 58263090 58263295 -62021017 + B3 SINE B2 1 211 -5 5 1029 1346 49 0 0 chr13 58263457 58263621 -62020691 + B2_Mm2 SINE B2 2 165 -30 5 1029 1202 50 0 0 chr13 58263648 58263788 -62020524 - B1_Mus1 SINE Alu -8 140 1 5 1029 189 282 85 88 chr13 58264367 58264515 -62019797 - MIRm SINE MIR -90 186 40 5 1029 216 86 0 0 chr13 58264571 58264606 -62019706 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1029 873 19 9 0 chr13 58264607 58264713 -62019599 - B1_Mus2 SINE Alu 0 147 41 5 1029 333 135 91 39 chr13 58264649 58264726 -62019586 - RLTR25B LTR ERVK -519 509 429 5 1029 506 169 24 12 chr13 58265205 58265317 -62018995 - B1_Mur4 SINE Alu -6 114 1 5 1029 1031 114 19 12 chr13 58265458 58265618 -62018694 + B2_Mm2 SINE B2 5 165 -30 5 1029 326 238 25 0 chr13 58265964 58266044 -62018268 - B1_Mus2 SINE Alu -65 82 1 5 1029 1225 21 14 14 chr13 58266330 58266477 -62017835 - B1_Mm SINE Alu 0 147 1 5 1029 368 227 120 0 chr13 58266654 58266772 -62017540 - B1_Mur2 SINE Alu -2 147 2 5 1029 1530 38 21 0 chr13 58266798 58266984 -62017328 - B2_Mm2 SINE B2 -4 191 2 5 1029 803 257 25 29 chr13 58266998 58267242 -62017070 + MTEa LTR MaLR 102 344 -35 5 1029 516 178 78 70 chr13 58267376 58267491 -62016821 + PB1D9 SINE Alu 2 117 -3 5 1029 362 111 0 0 chr13 58267517 58267571 -62016741 + B1_Mm SINE Alu 94 147 0 5 1029 240 183 169 0 chr13 58267566 58267584 -62016728 + RLTR25B LTR ERVK 427 444 -584 5 1029 342 0 0 0 chr13 58267584 58267622 -62016690 + (GA)n Simple_repeat Simple_repeat 2 39 0 5 1029 240 183 169 0 chr13 58267622 58267674 -62016638 + RLTR25B LTR ERVK 445 508 -520 5 1029 636 63 82 31 chr13 58267674 58267720 -62016592 + B1_Mus2 SINE Alu 45 147 0 5 1029 27 0 0 0 chr13 58267720 58267747 -62016565 + AT_rich Low_complexity Low_complexity 1 27 0 5 1029 333 191 28 42 chr13 58268057 58268128 -62016184 + ID4 SINE ID 10 79 -4 5 1029 1295 88 6 0 chr13 58268398 58268568 -62015744 + B2_Mm1t SINE B2 1 171 -22 5 1029 344 159 10 0 chr13 58268604 58268670 -62015642 + B2_Mm2 SINE B2 47 116 -100 5 1029 1135 174 195 16 chr13 58268760 58269006 -62015306 + RMER16 LTR ERVK 244 533 0 5 1029 888 168 114 0 chr13 58269016 58269183 -62015129 - B2_Mm1t SINE B2 -7 186 1 5 1029 369 0 0 0 chr13 58270139 58270180 -62014132 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1029 257 298 113 9 chr13 58270186 58270227 -62014085 - B2_Mm1t SINE B2 -19 174 123 5 1029 381 22 0 0 chr13 58270227 58270273 -62014039 + (TATG)n Simple_repeat Simple_repeat 2 47 0 5 1029 383 153 3 7 chr13 58270273 58270346 -62013966 - B2_Mm2 SINE B2 -71 122 47 5 1029 1182 114 0 18 chr13 58270397 58270567 -62013745 - B2_Mm1t SINE B2 -26 167 1 5 1029 359 297 112 63 chr13 58270619 58270692 -62013620 + B4 SINE B4 13 198 -94 5 1029 539 183 99 50 chr13 58270692 58270813 -62013499 + B1_Mus1 SINE Alu 1 127 -21 5 1029 359 297 112 63 chr13 58270813 58270824 -62013488 + B4 SINE B4 199 231 -61 5 1029 664 277 29 24 chr13 58270824 58271031 -62013281 + B3 SINE B2 1 208 -8 5 1029 359 297 112 63 chr13 58271031 58271048 -62013264 + B4 SINE B4 232 246 -46 5 1029 257 345 73 32 chr13 58271635 58271758 -62012554 + B4 SINE B4 69 196 -96 5 1029 540 307 0 14 chr13 58271660 58271802 -62012510 + B1_Mur1 SINE Alu 10 149 0 5 1029 330 301 44 9 chr13 58271887 58272001 -62012311 + RCHARR1 DNA MER1_type 80 197 -777 5 1029 601 241 144 0 chr13 58272404 58272591 -62011721 + RCHARR1 DNA MER1_type 273 486 -488 5 1029 653 231 147 11 chr13 58272591 58272775 -62011537 - B3 SINE B2 -7 209 1 5 1029 249 123 138 0 chr13 58272968 58273033 -62011279 + L1MC LINE L1 3700 3773 -2373 5 1029 1238 54 0 0 chr13 58273050 58273197 -62011115 + B1_Mm SINE Alu 1 147 0 5 1029 559 228 15 161 chr13 58273237 58273324 -62010988 + B3A SINE B2 13 90 -108 5 1029 1685 26 0 0 chr13 58273324 58273516 -62010796 + B2_Mm1t SINE B2 2 193 0 5 1029 559 228 15 161 chr13 58273516 58273627 -62010685 + B3A SINE B2 91 182 -16 5 1029 315 263 34 42 chr13 58273650 58273769 -62010543 + PB1D9 SINE Alu 1 118 -2 5 1029 282 310 17 39 chr13 58273890 58274071 -62010241 + L1M3 LINE L1 3917 4093 -2047 5 1029 247 265 118 0 chr13 58275102 58275170 -62009142 - B3 SINE B2 -15 201 126 5 1029 2058 100 58 6 chr13 58275874 58276185 -62008127 + ORR1A2 LTR MaLR 1 327 0 5 1029 1082 110 7 14 chr13 58276375 58276523 -62007789 - B1_Mus1 SINE Alu 0 148 2 5 1029 225 288 0 63 chr13 58276592 58276655 -62007657 + PB1D10 SINE Alu 48 106 -11 5 1029 234 333 33 11 chr13 58277016 58277107 -62007205 - Tigger5 DNA MER2_type 0 2406 2314 5 1029 220 296 123 0 chr13 58277188 58277269 -62007043 + B1_Mm SINE Alu 55 145 -2 5 1029 482 177 0 0 chr13 58277323 58277402 -62006910 - B1_Mus1 SINE Alu -69 79 1 5 1029 24 67 0 0 chr13 58279737 58279782 -62004530 + AT_rich Low_complexity Low_complexity 1 45 0 5 1029 367 261 109 34 chr13 58280054 58280201 -62004111 - B3 SINE B2 -58 158 1 5 1029 397 104 13 13 chr13 58282428 58282506 -62001806 + (GGAA)n Simple_repeat Simple_repeat 1 78 0 5 1029 302 294 57 25 chr13 58284850 58284972 -61999340 + Tigger7 DNA MER2_type 289 414 -2077 5 1029 227 341 12 24 chr13 58285186 58285270 -61999042 + Cheshire DNA MER1_type 7 89 -2331 5 1029 237 309 56 49 chr13 58285444 58285587 -61998725 + Cheshire DNA MER1_type 372 515 -1905 5 1029 358 205 77 0 chr13 58285664 58285742 -61998570 + PB1D7 SINE Alu 32 115 -5 5 1029 610 209 83 17 chr13 58285760 58285940 -61998372 + B3 SINE B2 12 203 -13 5 1029 1273 7 0 0 chr13 58285994 58286136 -61998176 + B1_Mm SINE Alu 2 143 -4 5 1029 303 0 64 0 chr13 58286136 58286183 -61998129 + (CAAA)n Simple_repeat Simple_repeat 1 50 0 5 1029 29 0 0 0 chr13 58286256 58286285 -61998027 + AT_rich Low_complexity Low_complexity 1 29 0 5 1029 309 51 0 0 chr13 58286301 58286340 -61997972 - B2_Mm2 SINE B2 -110 85 47 5 1029 759 116 221 13 chr13 58286368 58286517 -61997795 - B2_Mm2 SINE B2 -14 181 2 5 1029 389 194 31 31 chr13 58286618 58286714 -61997598 + B3 SINE B2 2 97 -119 5 1029 452 228 146 0 chr13 58286819 58286942 -61997370 - B1_Mur4 SINE Alu -8 142 2 5 1029 330 260 159 7 chr13 58287829 58287980 -61996332 + B3A SINE B2 1 174 -24 5 1029 281 185 198 0 chr13 58288284 58288365 -61995947 - B1_Mus1 SINE Alu -20 128 32 5 1029 23 0 0 0 chr13 58288542 58288565 -61995747 + AT_rich Low_complexity Low_complexity 1 23 0 5 1029 827 169 60 38 chr13 58288586 58288771 -61995541 + B2_Mm2 SINE B2 1 189 -6 5 1029 279 0 0 0 chr13 58289071 58289102 -61995210 + (GA)n Simple_repeat Simple_repeat 2 32 0 5 1029 578 235 79 42 chr13 58289240 58289480 -61994832 + MTE-int LTR MaLR 82 330 -1250 5 1029 250 261 244 8 chr13 58289526 58289657 -61994655 + MTE-int LTR MaLR 532 693 -887 5 1029 460 302 131 70 chr13 58289676 58290118 -61994194 + MTE-int LTR MaLR 773 1241 -339 5 1029 318 263 128 64 chr13 58290119 58290322 -61993990 + L1M2 LINE L1 4975 5190 -953 5 1029 1337 80 23 0 chr13 58290449 58290625 -61993687 + B2_Mm2 SINE B2 2 181 -14 5 1029 407 78 275 9 chr13 58290652 58290764 -61993548 + B2_Mm2 SINE B2 46 192 -3 5 1029 502 307 94 26 chr13 58290766 58291000 -61993312 + L1_Mur3 LINE L1 5361 5610 -270 5 1029 594 116 0 0 chr13 58291075 58291170 -61993142 - RLTR31_Mur LTR ERVK -458 95 1 5 1029 1413 94 16 0 chr13 58291967 58292158 -61992154 - B2_Mm2 SINE B2 0 195 2 5 1029 659 124 17 17 chr13 58292174 58292289 -61992023 - B1_Mus2 SINE Alu -6 141 27 5 1029 328 218 27 98 chr13 58292196 58292308 -61992004 - MT2B LTR ERVL -322 279 176 5 1029 225 240 0 0 chr13 58292617 58292667 -61991645 + L1MA9 LINE L1 6049 6098 -214 5 1029 387 0 0 0 chr13 58292722 58292765 -61991547 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 1029 241 297 24 137 chr13 58292765 58292908 -61991404 + B2_Mm2 SINE B2 32 157 -38 5 1029 288 0 0 0 chr13 58292908 58292940 -61991372 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1029 241 297 24 137 chr13 58292940 58292964 -61991348 + B2_Mm2 SINE B2 158 180 -15 5 1029 613 195 15 38 chr13 58294027 58294160 -61990152 - B1_Mur4 SINE Alu -7 143 14 5 1029 246 105 0 0 chr13 58294534 58294572 -61989740 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1029 3153 39 21 0 chr13 58295524 58295912 -61988400 - L1Md_F3 LINE L1 0 6584 6189 5 1029 273 275 72 18 chr13 58296434 58296545 -61987767 + MER21B LTR ERV1 119 235 -628 5 1029 995 112 18 12 chr13 58296999 58297162 -61987150 - B2_Mm2 SINE B2 -3 192 29 5 1029 891 203 23 37 chr13 58297199 58297414 -61986898 - B3 SINE B2 -4 212 1 5 1029 724 176 111 35 chr13 58298426 58298597 -61985715 + B3A SINE B2 1 184 -14 5 1029 288 281 79 0 chr13 58299596 58299685 -61984627 + PB1D7 SINE Alu 20 115 -5 5 1029 1150 37 0 0 chr13 58301441 58301577 -61982735 + B1_Mus2 SINE Alu 1 136 -11 5 1029 320 228 129 11 chr13 58301734 58301827 -61982485 - PB1D7 SINE Alu -8 112 9 5 1029 593 199 99 0 chr13 58302005 58302136 -61982176 - B1_Mur2 SINE Alu -5 144 1 5 1029 1117 88 0 0 chr13 58302585 58302732 -61981580 + B1_Mus1 SINE Alu 2 148 0 5 1029 23 0 0 0 chr13 58302734 58302757 -61981555 + AT_rich Low_complexity Low_complexity 1 23 0 5 1029 621 208 89 51 chr13 58302869 58303026 -61981286 + RSINE1 SINE B4 3 165 0 5 1029 351 263 65 93 chr13 58303136 58303149 -61981163 - L1MB8 LINE L1 -1 6177 6163 6 1029 609 252 0 0 chr13 58303149 58303284 -61981028 + B1_Mur2 SINE Alu 3 137 -12 6 1029 351 263 65 93 chr13 58303284 58303517 -61980795 - L1MB8 LINE L1 -16 6162 5938 6 1029 371 144 333 49 chr13 58303831 58303933 -61980379 + B1_Mus1 SINE Alu 2 132 -16 6 1029 1185 62 7 0 chr13 58303957 58304103 -61980209 - B1_Mus2 SINE Alu 0 147 1 6 1029 560 200 164 33 chr13 58305299 58305560 -61978752 + L1MC1 LINE L1 5177 5466 -867 6 1029 393 277 18 0 chr13 58305682 58305794 -61978518 + L1MC1 LINE L1 5808 5921 -412 6 1029 261 0 0 0 chr13 58306884 58306913 -61977399 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1029 515 247 17 122 chr13 58306954 58307134 -61977178 + B3 SINE B2 28 188 -7 6 1029 490 282 105 116 chr13 58307573 58307858 -61976454 + ID_B1 SINE B4 1 282 -10 6 1029 403 266 111 68 chr13 58308186 58308360 -61975952 + B3A SINE B2 1 183 -15 6 1029 1132 88 0 0 chr13 58308360 58308507 -61975805 + B1_Mus1 SINE Alu 2 148 0 6 1029 403 266 111 68 chr13 58308507 58308522 -61975790 + B3A SINE B2 184 198 0 6 1029 651 230 0 7 chr13 58308537 58308673 -61975639 + B1_Mur4 SINE Alu 1 135 -15 6 1029 264 280 72 34 chr13 58308820 58308949 -61975363 + MTE2b LTR MaLR 3 139 -240 6 1029 1269 7 0 26 chr13 58309008 58309159 -61975153 + B1_Mus2 SINE Alu 1 147 0 6 1029 1373 56 62 0 chr13 58309276 58309455 -61974857 - B2_Mm2 SINE B2 -5 190 1 6 1029 697 243 78 78 chr13 58309471 58309663 -61974649 - B3 SINE B2 -3 192 1 6 1029 308 299 56 0 chr13 58309899 58310006 -61974306 + MER63B DNA AcHobo 314 426 -10 6 1029 502 285 45 19 chr13 58310061 58310215 -61974097 + RSINE1 SINE B4 2 159 -6 6 1029 324 0 0 0 chr13 58310413 58310449 -61973863 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1029 794 199 14 0 chr13 58310477 58310618 -61973694 + B1_Mur2 SINE Alu 2 144 -5 6 1029 195 351 126 16 chr13 58310971 58311162 -61973150 - L2b LINE L2 -209 3166 2955 6 1029 1132 88 0 0 chr13 58311465 58311612 -61972700 + B1_Mus2 SINE Alu 1 147 0 6 1029 519 60 0 0 chr13 58311612 58311679 -61972633 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 6 1029 796 232 62 21 chr13 58312000 58312242 -61972070 + L1M4 LINE L1 5559 5810 -374 6 1029 331 260 0 0 chr13 58312260 58312337 -61971975 + RSINE1 SINE B4 2 78 -87 6 1029 212 309 36 0 chr13 58312477 58312561 -61971751 + PB1D10 SINE Alu 23 109 -8 6 1029 1419 83 5 0 chr13 58312728 58312920 -61971392 + B2_Mm1t SINE B2 1 193 0 6 1029 260 263 25 38 chr13 58313308 58313387 -61970925 + B4A SINE B4 5 82 -210 6 1029 204 200 0 35 chr13 58313563 58313620 -61970692 + (CTCA)n Simple_repeat Simple_repeat 2 56 0 6 1029 1238 55 0 0 chr13 58314531 58314677 -61969635 + B1_Mm SINE Alu 2 147 0 6 1029 286 242 128 40 chr13 58314682 58314807 -61969505 + L1MD LINE L1 5470 5605 -2390 6 1029 577 182 117 36 chr13 58314813 58314950 -61969362 + B1_Mur2 SINE Alu 2 149 0 6 1029 241 119 14 169 chr13 58315213 58315284 -61969028 + L1M5 LINE L1 5846 5905 -539 6 1029 24 53 0 0 chr13 58316399 58316437 -61967875 + GC_rich Low_complexity Low_complexity 1 38 0 6 1029 285 232 64 32 chr13 58316452 58316608 -61967704 + (CCCGG)n Simple_repeat Simple_repeat 2 162 0 6 1029 193 29 59 0 chr13 58318753 58318787 -61965525 + (GA)n Simple_repeat Simple_repeat 1 36 0 6 1029 253 277 59 26 chr13 58318846 58318998 -61965314 + RMER15 LTR ERVL 417 573 -2 6 1029 765 289 82 60 chr13 58319012 58319377 -61964935 - MTEa LTR MaLR -6 373 1 6 1029 442 244 0 112 chr13 58319836 58319970 -61964342 + B1_Mus1 SINE Alu 11 129 -19 6 1029 858 68 0 8 chr13 58320728 58320847 -61963465 + B1_Mus1 SINE Alu 26 143 -5 6 1029 2542 138 39 12 chr13 58320914 58321324 -61962988 + MTC LTR MaLR 1 421 0 6 1029 339 148 66 0 chr13 58321373 58321434 -61962878 + ID_B1 SINE B4 126 190 -34 6 1029 247 229 0 28 chr13 58321376 58321448 -61962864 + PB1D10 SINE Alu 48 117 0 6 1029 264 309 25 0 chr13 58322152 58322233 -61962079 - MLT1D LTR MaLR -161 344 262 6 1029 884 246 23 31 chr13 58322363 58322619 -61961693 + RMER15 LTR ERVL 1 254 -321 6 1029 743 51 0 0 chr13 58322620 58322718 -61961594 - BC1_Mm scRNA scRNA -54 98 1 6 1029 1517 147 12 0 chr13 58322713 58322972 -61961340 + RMER15 LTR ERVL 271 532 -43 6 1029 495 0 0 0 chr13 58322974 58323029 -61961283 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1029 206 57 0 54 chr13 58323039 58323076 -61961236 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 6 1029 1204 41 14 0 chr13 58323076 58323222 -61961090 - B1_Mus1 SINE Alu 0 148 1 6 1029 323 323 87 34 chr13 58323324 58323532 -61960780 - HERVL40-int LTR ERVL -35 5495 5277 6 1029 2391 184 91 29 chr13 58323836 58324396 -61959916 + RLTR17 LTR ERVK 98 692 0 6 1029 847 325 124 21 chr13 58325187 58325752 -61958560 - HERVL40-int LTR ERVL -1106 4424 3800 6 1029 180 0 0 0 chr13 58325752 58325772 -61958540 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 1029 847 327 68 28 chr13 58325772 58325798 -61958514 - HERVL40-int LTR ERVL -1731 3799 3774 6 1029 1223 48 7 0 chr13 58325800 58325946 -61958366 + B1_Mus2 SINE Alu 1 147 0 6 1029 243 0 0 0 chr13 58326038 58326065 -61958247 + (CAA)n Simple_repeat Simple_repeat 2 28 0 6 1029 276 329 124 34 chr13 58326230 58326463 -61957849 - HERVL40-int LTR ERVL -2018 3512 3259 6 1029 982 81 15 7 chr13 58326499 58326636 -61957676 + B1_Mus2 SINE Alu 1 138 -9 6 1029 243 0 0 0 chr13 58326636 58326663 -61957649 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 6 1029 1244 105 16 21 chr13 58326729 58326923 -61957389 + B2_Mm1t SINE B2 1 193 0 6 128 1069 172 182 8 chr13 58326936 58327194 -61957118 - MTD LTR MaLR -3 416 114 6 1030 2505 285 148 37 chr13 58327497 58328188 -61956124 - Lx8 LINE L1 -2 7471 6687 6 1030 2945 146 92 20 chr13 58328188 58328734 -61955578 - RMER4B LTR ERVK 0 585 1 6 1030 2505 285 148 37 chr13 58328734 58328834 -61955478 - Lx8 LINE L1 -787 6686 6589 6 1030 2663 113 119 68 chr13 58328834 58328962 -61955350 + RMER16 LTR ERVK 1 134 -399 6 1030 1153 76 0 7 chr13 58328962 58329108 -61955204 + B1_Mus2 SINE Alu 1 145 -2 6 1030 2663 113 119 68 chr13 58329108 58329127 -61955185 + RMER16 LTR ERVK 135 159 -374 6 1030 227 54 27 0 chr13 58329127 58329164 -61955148 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 1030 2663 113 119 68 chr13 58329164 58329518 -61954794 + RMER16 LTR ERVK 160 529 -4 6 1030 2505 285 148 37 chr13 58329518 58329842 -61954470 - Lx8 LINE L1 -885 6588 6233 6 1030 647 293 117 18 chr13 58330065 58330399 -61953913 - Lx8 LINE L1 -265 7208 6842 6 1030 25 0 0 0 chr13 58330399 58330424 -61953888 + AT_rich Low_complexity Low_complexity 1 25 0 6 1030 688 194 8 15 chr13 58330449 58330580 -61953732 - B3 SINE B2 -86 130 1 6 1030 550 323 111 8 chr13 58330580 58330814 -61953498 - Lx8 LINE L1 -617 6856 6599 6 1030 350 293 151 44 chr13 58331070 58331479 -61952833 - L1MA5A LINE L1 -372 5928 5491 6 1030 25 51 0 0 chr13 58331619 58331658 -61952654 + AT_rich Low_complexity Low_complexity 1 39 0 6 1030 318 232 284 5 chr13 58331664 58331872 -61952440 + RMER17C LTR ERVK 14 279 -131 6 1030 1203 154 98 92 chr13 58331907 58332222 -61952090 - RLTR23 LTR ERV1 -7 423 107 6 1030 206 118 0 0 chr13 58332260 58332294 -61952018 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1030 633 130 10 0 chr13 58332307 58332407 -61951905 - RLTR23 LTR ERV1 -325 105 5 6 1030 541 293 162 22 chr13 58332556 58332964 -61951348 - L1MA5A LINE L1 -1050 5093 4629 6 1030 227 204 20 0 chr13 58332948 58332997 -61951315 - L1MA5A LINE L1 -1785 4358 4309 6 1030 423 265 0 48 chr13 58332997 58333100 -61951212 - RSINE1 SINE B4 -64 101 4 6 1030 507 161 46 0 chr13 58333212 58333299 -61951013 - B1_Mur2 SINE Alu -57 92 2 6 1030 498 287 29 14 chr13 58333860 58333998 -61950314 + RSINE1 SINE B4 9 148 -17 6 1030 726 167 39 32 chr13 58334055 58334210 -61950102 + B3 SINE B2 1 156 -60 6 1030 1082 71 0 7 chr13 58335251 58335393 -61948919 + B1_Mm SINE Alu 1 141 -6 6 1030 180 0 0 0 chr13 58335394 58335414 -61948898 + (CA)n Simple_repeat Simple_repeat 1 20 0 6 1030 1431 64 26 11 chr13 58335513 58335703 -61948609 - B2_Mm2 SINE B2 -2 193 1 6 1030 1138 229 0 0 chr13 58335741 58335955 -61948357 - B3 SINE B2 -1 215 2 6 1030 1034 52 81 0 chr13 58336315 58336451 -61947861 + B1_Mm SINE Alu 1 147 0 6 1030 180 0 0 0 chr13 58336451 58336471 -61947841 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1030 607 150 57 32 chr13 58336676 58336800 -61947512 + B1_Mur4 SINE Alu 21 147 -3 6 1030 825 38 0 0 chr13 58336800 58336905 -61947407 + (CAAAC)n Simple_repeat Simple_repeat 2 106 0 6 1030 427 172 104 0 chr13 58336945 58337038 -61947274 - B1_Mur3 SINE Alu -16 104 1 6 1030 282 229 29 86 chr13 58337038 58337067 -61947245 - MT2B LTR ERVL -438 163 141 6 1030 547 292 27 0 chr13 58337541 58337688 -61946624 + B3A SINE B2 1 151 -47 6 1030 25 75 0 0 chr13 58338682 58338735 -61945577 + AT_rich Low_complexity Low_complexity 1 53 0 6 1030 326 242 181 32 chr13 58338757 58338851 -61945461 - RSINE1 SINE B4 -4 161 54 6 1030 355 265 44 23 chr13 58338881 58338994 -61945318 - PB1D7 SINE Alu -34 115 1 6 1030 559 181 34 17 chr13 58339028 58339146 -61945166 - PB1D9 SINE Alu 0 120 1 6 1030 435 252 141 8 chr13 58339359 58339487 -61944825 + B1_Mur2 SINE Alu 2 146 -3 6 1030 707 261 30 0 chr13 58339494 58339659 -61944653 + B3 SINE B2 1 170 -46 6 1030 306 198 42 0 chr13 58339667 58339763 -61944549 + (TATATG)n Simple_repeat Simple_repeat 3 102 0 6 1030 1108 76 21 0 chr13 58339818 58339962 -61944350 - B1_Mm SINE Alu 0 147 1 6 1030 748 78 250 0 chr13 58340549 58340665 -61943647 - B1_Mus1 SINE Alu -2 146 2 6 1030 27 0 0 0 chr13 58341098 58341125 -61943187 + AT_rich Low_complexity Low_complexity 1 27 0 6 1030 414 0 0 0 chr13 58341125 58341171 -61943141 + (TCTA)n Simple_repeat Simple_repeat 2 47 0 6 1030 201 147 0 0 chr13 58341171 58341205 -61943107 + (CAT)n Simple_repeat Simple_repeat 3 36 0 6 1030 763 147 31 0 chr13 58341206 58341335 -61942977 - B1_Mur3 SINE Alu -8 141 9 6 1030 599 270 26 21 chr13 58341612 58341805 -61942507 + B3A SINE B2 2 195 -3 6 1030 423 238 280 50 chr13 58341820 58342139 -61942173 + L1MB4 LINE L1 5477 5887 -293 6 1030 1359 85 16 11 chr13 58342139 58342330 -61941982 + B2_Mm2 SINE B2 3 194 -1 7 1030 423 214 45 57 chr13 58342330 58342425 -61941887 + L1MB4 LINE L1 5888 5990 -193 6 1030 551 143 10 0 chr13 58342513 58342611 -61941701 + PB1D9 SINE Alu 22 120 0 7 1030 28 61 0 0 chr13 58342664 58342713 -61941599 + AT_rich Low_complexity Low_complexity 1 49 0 7 1030 1263 34 0 0 chr13 58342829 58342976 -61941336 - B1_Mus1 SINE Alu 0 148 2 7 1030 627 216 6 103 chr13 58343306 58343471 -61940841 - B1_Mur3 SINE Alu 0 149 1 7 1030 753 151 12 93 chr13 58343852 58344013 -61940299 - B1_Mur3 SINE Alu -1 148 1 7 1030 1670 26 5 0 chr13 58344531 58344722 -61939590 - B2_Mm1a SINE B2 -1 192 1 7 1030 23 0 0 0 chr13 58344810 58344833 -61939479 + AT_rich Low_complexity Low_complexity 1 23 0 7 1030 1401 286 109 13 chr13 58345682 58346408 -61937904 - L1MB8 LINE L1 -88 6090 5290 7 1030 700 191 15 0 chr13 58346409 58346545 -61937767 + B3A SINE B2 4 141 -57 7 1030 996 93 47 0 chr13 58346600 58346750 -61937562 + B2_Mm2 SINE B2 2 158 -37 7 1030 441 0 0 0 chr13 58346751 58346800 -61937512 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 7 1030 263 235 0 0 chr13 58347015 58347066 -61937246 + B4A SINE B4 220 270 -22 7 1030 435 125 0 0 chr13 58347066 58347138 -61937174 + (CA)n Simple_repeat Simple_repeat 1 72 0 7 1030 21 0 0 0 chr13 58347161 58347182 -61937130 + AT_rich Low_complexity Low_complexity 1 21 0 7 1030 1508 57 5 0 chr13 58347208 58347400 -61936912 + L1_Mus1 LINE L1 6375 6567 0 7 1030 255 276 86 43 chr13 58347737 58347900 -61936412 - L1MB8 LINE L1 -1233 4913 4744 7 1030 217 254 164 0 chr13 58348536 58348603 -61935709 - PB1D9 SINE Alu -34 86 9 7 1030 2703 62 15 0 chr13 58348603 58348944 -61935368 - ORR1A0 LTR MaLR 0 346 1 7 1030 390 279 247 4 chr13 58349060 58349287 -61935025 + L1M5 LINE L1 5325 5606 -573 7 1030 299 298 0 11 chr13 58349290 58349385 -61934927 + ID_B1 SINE B4 82 175 -49 7 1030 423 257 0 10 chr13 58349306 58349408 -61934904 + PB1D10 SINE Alu 17 117 0 7 1030 488 226 80 88 chr13 58349603 58349661 -61934651 + L1MB8 LINE L1 5768 5819 -359 7 1030 416 184 298 0 chr13 58349661 58349775 -61934537 - B1F2 SINE Alu -1 148 1 7 1030 488 240 88 85 chr13 58349775 58350022 -61934290 + L1MB8 LINE L1 5820 6093 -86 7 1030 246 338 0 0 chr13 58350022 58350090 -61934222 + ID4 SINE ID 1 68 -15 7 1030 447 278 110 75 chr13 58350090 58350173 -61934139 + L1MB8 LINE L1 6094 6175 -4 7 1030 445 271 40 63 chr13 58350197 58350323 -61933989 - RSINE1 SINE B4 -38 127 5 7 1030 269 295 182 17 chr13 58351151 58351327 -61932985 - B4A SINE B4 -85 207 3 7 1030 501 62 0 0 chr13 58351355 58351420 -61932892 + (TTTC)n Simple_repeat Simple_repeat 2 66 0 7 1030 1175 62 0 0 chr13 58351422 58351567 -61932745 - B1_Mus2 SINE Alu 0 147 3 7 1030 389 228 76 0 chr13 58351730 58351822 -61932490 - RSINE1 SINE B4 -63 102 4 7 1030 273 183 21 10 chr13 58351862 58351928 -61932384 - PB1D10 SINE Alu 0 149 67 7 1030 328 286 26 0 chr13 58351985 58352062 -61932250 - RSINE1 SINE B4 -15 150 72 7 1030 274 221 198 0 chr13 58353583 58353669 -61930643 - ID_B1 SINE B4 -20 204 102 7 1030 1004 202 49 10 chr13 58353816 58354021 -61930291 + B3 SINE B2 3 215 -1 7 1030 341 261 136 37 chr13 58354058 58354249 -61930063 - B3 SINE B2 -6 210 1 7 1030 327 65 0 0 chr13 58354378 58354424 -61929888 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1030 541 239 17 0 chr13 58354447 58354564 -61929748 - B3A SINE B2 -79 119 1 7 1030 576 187 50 14 chr13 58354758 58354899 -61929413 - B2_Mm2 SINE B2 -6 189 44 7 1030 1231 41 0 7 chr13 58356029 58356177 -61928135 + B1_Mus2 SINE Alu 1 147 0 7 1030 237 83 0 0 chr13 58356177 58356213 -61928099 + (A)n Simple_repeat Simple_repeat 1 36 0 7 1030 345 314 70 6 chr13 58356451 58356608 -61927704 + RMER15 LTR ERVL 406 572 -3 7 1030 499 221 162 0 chr13 58357624 58357778 -61926534 - B3 SINE B2 -2 214 36 7 1030 567 243 7 22 chr13 58358635 58358774 -61925538 - B1F SINE Alu 0 149 13 7 1030 763 277 90 27 chr13 58358843 58359099 -61925213 + B4A SINE B4 8 279 -13 7 1030 454 267 0 0 chr13 58359632 58359737 -61924575 - B3 SINE B2 -109 107 3 7 1030 330 26 0 0 chr13 58360345 58360384 -61923928 + (CATA)n Simple_repeat Simple_repeat 3 41 0 7 1030 717 235 123 0 chr13 58361841 58362020 -61922292 + B3 SINE B2 1 201 -15 7 1030 29 47 0 0 chr13 58362046 58362089 -61922223 + AT_rich Low_complexity Low_complexity 1 43 0 7 1030 834 68 8 0 chr13 58362123 58362240 -61922072 + B1_Mus1 SINE Alu 30 147 -1 7 1030 213 94 0 0 chr13 58362583 58362615 -61921697 + (T)n Simple_repeat Simple_repeat 1 32 0 7 1030 368 247 21 21 chr13 58362615 58362710 -61921602 - B1_Mur2 SINE Alu 0 149 55 7 1030 252 156 0 0 chr13 58363084 58363129 -61921183 + B2_Mm2 SINE B2 2 46 -149 7 1030 466 220 0 68 chr13 58363504 58363621 -61920691 - PB1D10 SINE Alu -8 109 1 7 1030 949 16 129 30 chr13 58364026 58364146 -61920166 + B1_Mm SINE Alu 1 137 -10 7 1030 216 0 0 0 chr13 58364146 58364170 -61920142 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1030 949 16 129 30 chr13 58364170 58364181 -61920131 + B1_Mm SINE Alu 138 145 -2 7 1030 22 0 0 0 chr13 58364752 58364774 -61919538 + AT_rich Low_complexity Low_complexity 1 22 0 7 1030 32 43 0 0 chr13 58364822 58364868 -61919444 + AT_rich Low_complexity Low_complexity 1 46 0 7 1030 221 140 0 23 chr13 58365577 58365621 -61918691 + GA-rich Low_complexity Low_complexity 1 43 0 7 1030 231 114 0 0 chr13 58366095 58366130 -61918182 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1030 302 284 9 38 chr13 58366150 58366256 -61918056 + Lx8 LINE L1 6671 6773 -700 7 1030 1187 61 0 0 chr13 58366476 58366623 -61917689 + B1_Mm SINE Alu 1 147 0 7 1030 198 0 0 0 chr13 58367088 58367110 -61917202 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 1030 24 0 0 0 chr13 58367110 58367134 -61917178 + GC_rich Low_complexity Low_complexity 1 24 0 7 1030 772 174 8 0 chr13 58367297 58367429 -61916883 + B1_Mur4 SINE Alu 6 138 -12 7 1030 361 103 35 0 chr13 58367425 58367483 -61916829 + RLTR12A LTR ERVK 63 122 -446 7 1030 1688 162 13 7 chr13 58367488 58367798 -61916514 + RLTR12A LTR ERVK 253 564 -4 7 1030 1208 68 0 0 chr13 58368701 58368848 -61915464 - B1_Mus2 SINE Alu 0 147 1 7 1030 1531 62 5 5 chr13 58369032 58369225 -61915087 - B2_Mm1t SINE B2 0 193 1 7 1030 473 289 48 43 chr13 58369371 58369457 -61914855 + MYSERV6-int LTR ERVK 87 120 -6430 7 1030 1190 68 7 0 chr13 58369457 58369604 -61914708 + B1_Mus1 SINE Alu 1 148 0 7 1030 473 283 53 28 chr13 58369604 58369820 -61914492 + MYSERV6-int LTR ERVK 121 311 -6239 7 1030 1257 277 58 28 chr13 58369819 58370250 -61914062 + MYSERV6-int LTR ERVK 1193 1636 -7323 7 1030 301 123 44 44 chr13 58370279 58370347 -61913965 + MYSERV-int LTR ERVK 4745 4812 -968 7 1030 2956 241 80 56 chr13 58370348 58371434 -61912878 + MYSERV16_I-int LTR ERVK 5 1116 -1210 7 1030 3187 215 96 4 chr13 58371475 58372292 -61912020 + MYSERV-int LTR ERVK 5657 6548 -2 7 1030 3025 158 38 27 chr13 58372292 58372850 -61911462 + RLTR12A LTR ERVK 1 564 -4 7 1030 420 276 8 17 chr13 58373177 58373295 -61911017 + PB1D10 SINE Alu 1 117 0 7 1030 350 283 18 54 chr13 58373888 58374000 -61910312 - PB1D10 SINE Alu -9 108 1 7 1030 183 42 0 0 chr13 58374280 58374304 -61910008 + (C)n Simple_repeat Simple_repeat 1 24 0 7 1030 273 135 0 0 chr13 58375319 58375371 -61908941 + (CTCCG)n Simple_repeat Simple_repeat 2 53 0 7 1030 21 36 0 0 chr13 58375530 58375558 -61908754 + GC_rich Low_complexity Low_complexity 1 28 0 7 1030 234 0 0 0 chr13 58375559 58375585 -61908727 + (CGGGG)n Simple_repeat Simple_repeat 3 28 0 7 1030 23 33 0 0 chr13 58375597 58375627 -61908685 + GC_rich Low_complexity Low_complexity 1 30 0 7 1030 26 0 0 0 chr13 58375833 58375859 -61908453 + GC_rich Low_complexity Low_complexity 1 26 0 7 1030 224 238 92 35 chr13 58376570 58376657 -61907655 + PB1D10 SINE Alu 5 96 -21 7 1030 336 319 9 0 chr13 58376989 58377102 -61907210 + B4 SINE B4 54 167 -125 7 1030 227 286 146 28 chr13 58377265 58377409 -61906903 + MER5A1 DNA MER1_type 2 162 -4 7 1030 527 218 231 24 chr13 58378050 58378219 -61906093 + B3 SINE B2 4 207 -9 7 1030 225 0 0 0 chr13 58378264 58378289 -61906023 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1030 945 31 62 0 chr13 58378684 58378812 -61905500 + B1_Mus1 SINE Alu 7 142 -6 7 1030 234 0 0 0 chr13 58378814 58378840 -61905472 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 7 1030 200 179 0 97 chr13 58378903 58378965 -61905347 - L2 LINE L2 -2552 867 812 7 1030 317 250 113 19 chr13 58379083 58379189 -61905123 + ID_B1 SINE B4 109 224 0 7 1030 22 0 0 0 chr13 58379988 58380010 -61904302 + AT_rich Low_complexity Low_complexity 1 22 0 7 1030 740 194 0 0 chr13 58380041 58380170 -61904142 - B3 SINE B2 -87 129 1 7 1030 836 179 93 44 chr13 58380206 58380368 -61903944 - B3 SINE B2 0 216 40 7 1030 2496 103 76 15 chr13 58380368 58380761 -61903551 - MTC LTR MaLR 0 421 5 7 1030 836 179 93 44 chr13 58380761 58380802 -61903510 - B3 SINE B2 -177 39 3 7 1030 259 356 67 14 chr13 58380802 58381010 -61903302 + HAL1 LINE L1 1650 1868 -639 7 1030 460 301 86 72 chr13 58381344 58381626 -61902686 + L1MC1 LINE L1 5878 6160 -184 7 1030 359 198 161 0 chr13 58381637 58381718 -61902594 + B1F SINE Alu 5 98 -51 7 1030 886 144 0 14 chr13 58382099 58382247 -61902065 + B1_Mur3 SINE Alu 2 147 -2 7 1030 27 73 0 0 chr13 58383259 58383314 -61900998 + AT_rich Low_complexity Low_complexity 1 55 0 7 1030 530 181 85 17 chr13 58383870 58383988 -61900324 - B1_Mus2 SINE Alu 0 147 22 7 1030 263 241 0 117 chr13 58383904 58383998 -61900314 - MT2B LTR ERVL -341 260 178 7 1030 1163 75 0 0 chr13 58384538 58384684 -61899628 + B1_Mus2 SINE Alu 2 147 0 7 1030 198 103 0 0 chr13 58384684 58384713 -61899599 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1030 1766 183 8 14 chr13 58384960 58385321 -61898991 - RLTR14 LTR ERV1 -23 359 1 8 1030 26 0 0 0 chr13 58385331 58385357 -61898955 + AT_rich Low_complexity Low_complexity 1 26 0 8 1030 246 32 0 0 chr13 58385664 58385695 -61898617 + (CAG)n Simple_repeat Simple_repeat 3 33 0 8 1030 436 265 65 19 chr13 58386745 58386762 -61897550 + B4 SINE B4 70 165 -127 8 1030 941 62 0 0 chr13 58386762 58386890 -61897422 + B1_Mus1 SINE Alu 1 128 -20 8 1030 884 232 83 36 chr13 58386933 58387210 -61897102 + B4A SINE B4 3 292 0 8 1030 524 158 135 45 chr13 58387674 58387807 -61896505 - B1_Mur3 SINE Alu 0 149 5 8 1030 270 0 0 0 chr13 58387857 58387887 -61896425 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 1030 885 134 0 0 chr13 58388242 58388391 -61895921 + (TG)n Simple_repeat Simple_repeat 2 150 0 8 1030 22 0 0 0 chr13 58388596 58388618 -61895694 + AT_rich Low_complexity Low_complexity 1 22 0 8 1030 598 216 49 97 chr13 58389937 58390122 -61894190 - B3 SINE B2 -7 209 34 8 1030 318 185 174 61 chr13 58390093 58390191 -61894121 - B3 SINE B2 -105 111 3 8 1030 230 270 88 22 chr13 58390202 58390293 -61894019 - B3 SINE B2 -7 209 113 8 1030 890 108 13 5 chr13 58390832 58390979 -61893333 - B2_Mm2 SINE B2 -61 155 1 8 1030 290 263 62 21 chr13 58391311 58391408 -61892904 - B3 SINE B2 -42 174 74 8 1030 806 98 52 8 chr13 58392003 58392137 -61892175 + B1_Mus2 SINE Alu 8 147 0 8 1030 251 222 0 0 chr13 58394945 58394999 -61889313 - PB1D9 SINE Alu -2 118 65 8 1030 246 226 47 23 chr13 58395487 58395573 -61888739 - B1F2 SINE Alu -61 88 1 8 1030 292 358 95 0 chr13 58397004 58397099 -61887213 + PB1D10 SINE Alu 1 104 -13 8 1030 432 308 21 7 chr13 58397670 58397814 -61886498 - B3A SINE B2 -2 196 51 8 1030 554 313 0 81 chr13 58398199 58398300 -61886012 + RSINE1 SINE B4 6 105 -60 8 1030 2228 144 13 27 chr13 58398300 58398672 -61885640 + ORR1B2 LTR MaLR 1 367 0 8 1030 6799 148 124 29 chr13 58398672 58399919 -61884393 + ORR1B2-int LTR MaLR 1 1393 -116 8 1030 1562 57 0 0 chr13 58399919 58400111 -61884201 - B2_Mm1a SINE B2 0 193 2 8 1030 6799 148 124 29 chr13 58400111 58400241 -61884071 + ORR1B2-int LTR MaLR 1394 1509 0 8 1030 1794 132 153 9 chr13 58400241 58400561 -61883751 + ORR1B2 LTR MaLR 1 366 -1 8 1030 554 313 0 81 chr13 58400561 58400631 -61883681 + RSINE1 SINE B4 106 163 -2 8 1030 281 260 14 0 chr13 58401080 58401153 -61883159 + L1MA4 LINE L1 5827 5900 -400 8 1030 453 251 176 36 chr13 58401416 58401633 -61882679 + MTD LTR MaLR 171 405 -14 8 1030 793 271 86 99 chr13 58401894 58402453 -61881859 + MTC-int LTR MaLR 340 920 -178 8 1030 733 205 56 66 chr13 58402460 58402658 -61881654 - B3A SINE B2 0 198 3 8 1030 271 274 288 0 chr13 58402665 58402811 -61881501 + MTC-int LTR MaLR 1390 1577 -3 8 1030 691 251 171 19 chr13 58402858 58403167 -61881145 + MTD LTR MaLR 49 404 -15 8 1030 438 81 0 0 chr13 58403169 58403231 -61881081 - B1_Mus1 SINE Alu -84 64 3 8 1030 230 230 0 53 chr13 58403400 58403476 -61880836 - B1F1 SINE Alu -8 141 48 8 1030 811 186 119 0 chr13 58405130 58405307 -61879005 + B3 SINE B2 1 198 -18 8 1030 228 234 91 67 chr13 58405624 58405789 -61878523 - HAL1 LINE L1 -295 2212 2044 8 1030 501 268 68 40 chr13 58405885 58406033 -61878279 - RSINE1 SINE B4 -3 162 11 8 1030 432 0 0 0 chr13 58406344 58406392 -61877920 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1030 496 234 20 46 chr13 58406401 58406553 -61877759 - B3 SINE B2 -67 149 2 8 1030 243 0 0 0 chr13 58406773 58406800 -61877512 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1030 834 163 0 26 chr13 58406939 58407090 -61877222 - B1_Mur1 SINE Alu -1 148 2 8 1030 2361 51 10 0 chr13 58407104 58407400 -61876912 + L1Md_F2 LINE L1 6280 6578 -4 8 1030 933 267 194 13 chr13 58407821 58408352 -61875960 - L1MB8 LINE L1 -17 6161 5535 8 1030 330 232 40 10 chr13 58408436 58408519 -61875793 - L1MB8 LINE L1 -749 5397 5313 8 1030 833 89 104 0 chr13 58408519 58408654 -61875658 - B1_Mur3 SINE Alu 0 149 1 8 1030 304 232 42 10 chr13 58408654 58408669 -61875643 - L1MB8 LINE L1 -862 5312 5299 8 1030 234 274 0 16 chr13 58408700 58408763 -61875549 - ID_B1 SINE B4 -65 159 98 8 1030 310 301 118 0 chr13 58408763 58408966 -61875346 - L1MB8 LINE L1 -842 5304 5078 8 1030 617 182 42 7 chr13 58408971 58409115 -61875197 + B3A SINE B2 2 150 -48 8 1030 387 0 0 0 chr13 58409329 58409372 -61874940 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 8 1030 470 157 11 0 chr13 58409416 58409505 -61874807 - BC1_Mm scRNA scRNA -62 90 1 8 1030 180 246 63 32 chr13 58409889 58409952 -61874360 - MIRb SINE MIR -76 192 128 8 1030 326 179 336 22 chr13 58410515 58410652 -61873660 + B3A SINE B2 3 182 -16 8 1030 483 188 77 0 chr13 58411557 58411674 -61872638 + L1MB4 LINE L1 6005 6130 -50 8 1030 227 136 0 0 chr13 58411810 58411854 -61872458 + L1MB4 LINE L1 6136 6179 -1 8 1030 270 0 0 0 chr13 58411982 58412012 -61872300 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1030 665 243 7 7 chr13 58412016 58412157 -61872155 - B4A SINE B4 0 292 152 8 1030 346 252 176 0 chr13 58412252 58412383 -61871929 - B3 SINE B2 0 216 63 8 1030 253 248 178 8 chr13 58413339 58413457 -61870855 + ID_B1 SINE B4 82 219 -5 8 1030 1651 60 0 5 chr13 58414233 58414450 -61869862 - L1_Mus2 LINE L1 0 6566 6351 8 1030 1344 118 0 10 chr13 58414929 58415125 -61869187 - B2_Mm2 SINE B2 0 195 2 8 1030 539 237 58 89 chr13 58415277 58415467 -61868845 + B3A SINE B2 14 197 -1 8 1030 230 327 46 18 chr13 58415800 58415909 -61868403 + MER5C DNA MER1_type 48 159 -154 8 1030 328 109 2 0 chr13 58415958 58416022 -61868290 + URR1B DNA MER1_type 82 146 -79 8 1030 213 39 0 0 chr13 58416023 58416049 -61868263 + (TA)n Simple_repeat Simple_repeat 1 26 0 8 1030 528 30 0 0 chr13 58416055 58416121 -61868191 + (GA)n Simple_repeat Simple_repeat 1 66 0 8 1030 272 163 0 0 chr13 58416171 58416214 -61868098 + B1F1 SINE Alu 60 102 -47 8 1030 3727 227 61 38 chr13 58417318 58419205 -61865107 + Lx5 LINE L1 5180 7041 -17 8 1030 598 163 131 8 chr13 58419470 58419600 -61864712 + B1_Mus2 SINE Alu 2 147 0 8 1030 434 254 76 0 chr13 58419637 58419755 -61864557 - PB1 SINE Alu 0 127 1 8 1030 848 212 201 0 chr13 58419943 58420122 -61864190 + B3 SINE B2 1 215 -1 8 1030 252 239 119 0 chr13 58420162 58420271 -61864041 + L1MB4 LINE L1 6049 6170 -10 8 1030 21 36 0 0 chr13 58420542 58420570 -61863742 + AT_rich Low_complexity Low_complexity 1 28 0 8 1030 387 73 0 0 chr13 58422047 58422102 -61862210 + (CA)n Simple_repeat Simple_repeat 2 56 0 8 1030 384 250 115 0 chr13 58422106 58422202 -61862110 + PB1D7 SINE Alu 4 110 -10 8 1030 391 298 33 0 chr13 58422628 58422760 -61861552 + B1F2 SINE Alu 5 149 0 8 1030 311 263 180 10 chr13 58422988 58423088 -61861224 - PB1D10 SINE Alu 0 117 1 8 1030 1008 205 99 11 chr13 58423130 58423392 -61860920 - Lx9 LINE L1 -19 7625 7341 8 1030 2056 109 77 6 chr13 58423415 58423738 -61860574 + ORR1A1 LTR MaLR 1 346 0 8 1030 288 0 0 0 chr13 58423858 58423890 -61860422 + (A)n Simple_repeat Simple_repeat 1 32 0 8 1030 367 156 70 40 chr13 58424183 58424283 -61860029 + PB1D10 SINE Alu 15 117 0 8 1030 348 208 26 0 chr13 58424896 58424973 -61859339 - ID4 SINE ID -3 80 2 8 1030 368 205 210 16 chr13 58425005 58425129 -61859183 + B1_Mur2 SINE Alu 2 149 0 8 1030 428 261 16 57 chr13 58425618 58425740 -61858572 - B3 SINE B2 -26 190 74 8 1030 604 179 9 9 chr13 58425804 58425917 -61858395 + B3 SINE B2 1 113 -103 8 1030 21 0 0 0 chr13 58425977 58425998 -61858314 + AT_rich Low_complexity Low_complexity 1 21 0 8 1030 336 302 28 9 chr13 58426073 58426180 -61858132 - RSINE1 SINE B4 -4 161 53 8 1030 379 247 0 0 chr13 58426562 58426639 -61857673 + ID4_ SINE ID 5 81 -2 8 1030 581 227 62 0 chr13 58426908 58427036 -61857276 - B1F SINE Alu -13 136 1 8 1030 1280 196 142 9 chr13 58427553 58427883 -61856429 - ORR1D1 LTR MaLR 0 374 1 8 1030 312 256 100 0 chr13 58428980 58429070 -61855242 - PB1D10 SINE Alu 0 117 19 8 1030 224 294 97 11 chr13 58428997 58429090 -61855222 - ID_B1 SINE B4 -45 179 79 8 1030 196 30 61 0 chr13 58429601 58429634 -61854678 + (CAA)n Simple_repeat Simple_repeat 2 36 0 8 1030 986 188 5 24 chr13 58429659 58429866 -61854446 + B3 SINE B2 14 216 0 8 1030 1359 105 0 6 chr13 58429874 58430056 -61854256 - B2_Mm2 SINE B2 -14 181 1 8 1030 30 0 0 0 chr13 58430060 58430090 -61854222 + AT_rich Low_complexity Low_complexity 1 30 0 8 1030 1172 61 7 0 chr13 58430513 58430660 -61853652 + B1_Mus1 SINE Alu 1 148 0 8 1030 323 216 40 0 chr13 58430770 58430844 -61853468 + ORR1E LTR MaLR 274 350 -9 8 1030 2227 49 3 11 chr13 58430888 58431175 -61853137 + L1_Mus1 LINE L1 6283 6567 0 8 1030 791 197 61 20 chr13 58431753 58431950 -61852362 + B3 SINE B2 1 205 -11 8 1030 612 219 32 0 chr13 58432054 58432209 -61852103 + RLTR20B2 LTR ERVK 388 547 -13 8 1030 284 231 4 0 chr13 58432641 58432719 -61851593 - ID4_ SINE ID -69 83 5 8 1030 718 176 0 31 chr13 58433151 58433280 -61851032 + B1_Mur1 SINE Alu 25 149 0 8 1030 3428 145 21 44 chr13 58433414 58433735 -61850577 + L1_Mur2 LINE L1 4699 5019 -858 8 1030 1487 77 5 5 chr13 58433735 58433930 -61850382 + B2_Mm2 SINE B2 1 195 0 8 1030 3428 145 21 44 chr13 58433930 58434222 -61850090 + L1_Mur2 LINE L1 5020 5298 -579 8 1030 1236 54 0 0 chr13 58434222 58434370 -61849942 + B1_Mus1 SINE Alu 1 148 0 8 1030 7789 93 54 18 chr13 58434374 58435540 -61848772 + Lx2 LINE L1 5783 6990 -7 8 1030 1328 258 114 2 chr13 58435666 58436059 -61848253 + Lx8 LINE L1 6337 6773 -700 8 1030 556 256 150 0 chr13 58436077 58436257 -61848055 + Lx8 LINE L1 6847 7053 -420 8 1030 216 0 0 0 chr13 58436297 58436321 -61847991 + (CA)n Simple_repeat Simple_repeat 1 24 0 9 1030 24 32 0 0 chr13 58436448 58436479 -61847833 + AT_rich Low_complexity Low_complexity 1 31 0 9 1030 663 250 22 38 chr13 58436527 58436710 -61847602 - B3A SINE B2 -16 182 3 9 1030 1011 31 0 0 chr13 58436731 58436860 -61847452 + B1_Mus1 SINE Alu 20 148 0 9 1030 239 179 18 0 chr13 58436860 58436916 -61847396 + (CAAA)n Simple_repeat Simple_repeat 1 57 0 9 1030 1082 259 140 38 chr13 58436947 58437403 -61846909 + L1M2 LINE L1 4352 4849 -1294 9 1030 2440 130 50 10 chr13 58437403 58437807 -61846505 + MTC LTR MaLR 2 421 0 9 1030 1082 259 140 38 chr13 58437807 58437935 -61846377 + L1M2 LINE L1 4850 4995 -1148 9 1030 230 118 56 56 chr13 58437973 58438027 -61846285 - PB1D9 SINE Alu 0 120 67 9 1030 597 216 8 0 chr13 58438024 58438149 -61846163 - B1_Mur2 SINE Alu -22 127 2 9 1030 713 188 0 40 chr13 58438295 58438445 -61845867 + B1_Mur4 SINE Alu 5 148 -2 9 1030 242 259 11 69 chr13 58438483 58438570 -61845742 - ID4 SINE ID 0 83 2 9 1030 658 207 112 15 chr13 58439249 58439445 -61844867 + MTEb LTR MaLR 163 377 -2 9 1030 650 289 164 26 chr13 58439427 58439451 -61844861 + Charlie1a DNA MER1_type 583 603 -852 9 1030 3263 268 183 29 chr13 58439451 58440167 -61844145 + MTEb-int LTR MaLR 4 823 -757 9 1030 630 0 0 0 chr13 58440167 58440237 -61844075 + (CAG)n Simple_repeat Simple_repeat 3 72 0 9 1030 3263 268 183 29 chr13 58440237 58440886 -61843426 + MTEb-int LTR MaLR 824 1580 0 9 1030 972 254 106 20 chr13 58440886 58441235 -61843077 + MTEb LTR MaLR 1 379 0 9 1030 650 289 164 26 chr13 58441235 58441745 -61842567 + Charlie1a DNA MER1_type 604 1191 -264 9 1030 337 167 37 49 chr13 58441937 58442019 -61842293 - B1F1 SINE Alu -64 85 5 9 1030 310 203 14 0 chr13 58441963 58442032 -61842280 - ID_B1 SINE B4 -82 142 73 9 1030 487 216 52 0 chr13 58442137 58442253 -61842059 - B1F SINE Alu -15 134 13 9 1030 421 310 0 0 chr13 58442253 58442266 -61842046 - ID_B1 SINE B4 -15 209 81 9 1030 314 75 38 0 chr13 58442271 58442324 -61841988 + (TCCC)n Simple_repeat Simple_repeat 3 57 0 9 1030 481 216 129 38 chr13 58442476 58442612 -61841700 + B3 SINE B2 3 153 -45 9 1030 548 65 13 0 chr13 58442612 58442689 -61841623 + (CA)n Simple_repeat Simple_repeat 1 78 0 9 1030 432 274 115 44 chr13 58442689 58442735 -61841577 + B3A SINE B2 154 198 0 9 1030 613 217 84 0 chr13 58442914 58443057 -61841255 + RSINE1 SINE B4 9 163 -2 9 1030 916 263 28 5 chr13 58443300 58443514 -61840798 + ID_B1 SINE B4 5 223 -1 9 1030 400 308 23 8 chr13 58443530 58443661 -61840651 + B1F SINE Alu 1 133 -16 9 1030 819 189 0 15 chr13 58443661 58443924 -61840388 + GA-rich Low_complexity Low_complexity 1 259 0 9 1030 242 213 0 0 chr13 58443964 58444011 -61840301 + ID4_ SINE ID 14 60 -23 9 1030 283 244 0 19 chr13 58444268 58444415 -61839897 - B1F SINE Alu 0 147 61 9 1030 261 252 0 0 chr13 58444409 58444497 -61839815 - B1F SINE Alu -19 130 65 9 1030 587 269 27 7 chr13 58444834 58444980 -61839332 + B1F SINE Alu 1 149 0 9 1030 285 273 110 105 chr13 58444987 58445091 -61839221 + ID_B1 SINE B4 8 217 -7 9 1030 328 198 191 38 chr13 58445091 58445196 -61839116 + B1F2 SINE Alu 22 142 -7 9 1030 234 305 0 24 chr13 58446499 58446583 -61837729 + ID4_ SINE ID 1 82 -1 9 1030 450 220 59 29 chr13 58446653 58446789 -61837523 + B1F1 SINE Alu 1 140 -9 9 1030 1701 26 0 0 chr13 58447284 58447477 -61836835 - B2_Mm1a SINE B2 0 193 1 9 1030 267 240 0 0 chr13 58447510 58447560 -61836752 + PB1D9 SINE Alu 4 53 -67 9 1030 220 196 98 0 chr13 58451290 58451341 -61832971 + B1F1 SINE Alu 87 142 -7 9 1030 592 281 93 19 chr13 58451403 58451671 -61832641 + B4A SINE B4 3 290 -2 9 1030 284 337 58 0 chr13 58452525 58452626 -61831686 + PB1D7 SINE Alu 1 106 -14 9 1030 1007 200 46 5 chr13 58452672 58452868 -61831444 + B3 SINE B2 6 209 -7 9 1030 991 83 14 0 chr13 58452888 58453033 -61831279 + B1_Mus2 SINE Alu 1 147 0 9 1030 182 247 82 0 chr13 58453048 58453121 -61831191 - L2 LINE L2 -805 2614 2536 9 1030 222 340 128 44 chr13 58453191 58453465 -61830847 - L2 LINE L2 -1018 2401 2105 9 1030 476 273 67 0 chr13 58453680 58453830 -61830482 + ID_B1 SINE B4 2 161 -63 9 1030 917 277 65 12 chr13 58454165 58454490 -61829822 + L1M2 LINE L1 5455 5796 -495 9 1030 25 0 0 0 chr13 58454680 58454705 -61829607 + AT_rich Low_complexity Low_complexity 1 25 0 9 1030 578 239 0 0 chr13 58454783 58454896 -61829416 + PB1D9 SINE Alu 1 113 -7 9 1030 669 231 19 13 chr13 58454908 58455066 -61829246 + B3 SINE B2 10 168 -48 9 1030 234 0 0 0 chr13 58455094 58455120 -61829192 + (CA)n Simple_repeat Simple_repeat 1 26 0 9 1030 27 29 0 0 chr13 58455121 58455155 -61829157 + AT_rich Low_complexity Low_complexity 1 34 0 9 1030 439 168 109 0 chr13 58455214 58455315 -61828997 + B3 SINE B2 6 117 -99 9 1030 312 268 38 13 chr13 58455526 58455649 -61828663 + B1F SINE Alu 24 146 -1 9 1030 3818 14 0 0 chr13 58456709 58457135 -61827177 + L1Md_A LINE L1 6157 6582 0 9 1030 234 342 13 0 chr13 58457150 58457229 -61827083 + RSINE1 SINE B4 2 81 -84 9 1030 608 137 10 19 chr13 58457159 58457263 -61827049 + B3 SINE B2 10 112 -104 9 1030 377 214 40 104 chr13 58457320 58457342 -61826970 + MT2B LTR ERVL 141 154 -447 9 1030 741 195 0 0 chr13 58457342 58457470 -61826842 + B1_Mus1 SINE Alu 1 128 -20 9 1030 733 100 8 16 chr13 58457470 58457592 -61826720 + (GAAA)n Simple_repeat Simple_repeat 4 124 0 9 1030 22 70 0 0 chr13 58457592 58457635 -61826677 + AT_rich Low_complexity Low_complexity 1 43 0 9 1030 231 151 89 54 chr13 58457806 58457862 -61826450 + RSINE1 SINE B4 82 139 -26 9 128 372 337 44 44 chr13 58457992 58458172 -61826140 - MTE2a LTR MaLR -92 287 108 9 1031 588 210 87 0 chr13 58458173 58458311 -61826001 + RSINE1 SINE B4 4 153 -12 9 1031 216 338 0 0 chr13 58458841 58458915 -61825397 - PB1D7 SINE Alu -40 80 7 9 1031 300 326 88 27 chr13 58459322 58459470 -61824842 + RSINE1 SINE B4 3 159 -6 9 1031 342 152 30 0 chr13 58459550 58459616 -61824696 + B1_Mus2 SINE Alu 3 70 -77 9 1031 23 0 0 0 chr13 58459822 58459845 -61824467 + AT_rich Low_complexity Low_complexity 1 23 0 9 1031 29 47 0 0 chr13 58460214 58460257 -61824055 + GC_rich Low_complexity Low_complexity 1 43 0 9 1031 203 89 0 118 chr13 58460593 58460644 -61823668 + (CCCCG)n Simple_repeat Simple_repeat 4 48 0 9 1031 1355 84 21 10 chr13 58461092 58461284 -61823028 + B2_Mm2 SINE B2 2 195 0 9 1031 1154 68 7 0 chr13 58461293 58461440 -61822872 + B1_Mus1 SINE Alu 1 148 0 9 1031 257 125 18 0 chr13 58461440 58461496 -61822816 + (CAAAA)n Simple_repeat Simple_repeat 4 60 0 9 1031 668 220 77 8 chr13 58461546 58461723 -61822589 - B3 SINE B2 -10 188 1 9 1031 1802 186 45 25 chr13 58461935 58462331 -61821981 - MTC LTR MaLR -17 404 1 9 1031 778 222 111 5 chr13 58462603 58462802 -61821510 - ORR1C2 LTR MaLR -1 383 164 9 1031 566 296 25 29 chr13 58462802 58463084 -61821228 + RLTR18B LTR ERVK 1 269 -347 9 1031 1357 132 22 31 chr13 58463170 58463397 -61820915 + URR1A DNA MER1_type 1 225 -1 9 1031 624 303 79 25 chr13 58463427 58463705 -61820607 + RLTR18B LTR ERVK 217 509 -3 9 1031 849 139 33 0 chr13 58463711 58463862 -61820450 - ORR1D1 LTR MaLR -218 156 1 9 1031 268 258 19 12 chr13 58463908 58464041 -61820271 - MLT1F LTR MaLR 0 624 485 9 1031 786 168 169 51 chr13 58464075 58464270 -61820042 + URR1B DNA MER1_type 3 220 -5 9 1031 317 272 171 67 chr13 58464444 58464568 -61819744 + RMER20B LTR ERVK 147 296 -331 9 1031 8094 33 3 4 chr13 58464568 58465498 -61818814 + RLTR13B3 LTR ERVK 1 929 0 9 1031 317 272 171 67 chr13 58465498 58465613 -61818699 + RMER20B LTR ERVK 297 411 -216 9 1031 627 132 0 0 chr13 58466068 58466174 -61818138 + RMER19B LTR ERVK 1 106 -796 9 1031 904 177 28 60 chr13 58466188 58466404 -61817908 - RLTR26 LTR ERVK 0 642 434 9 1031 2182 173 37 33 chr13 58466396 58466880 -61817432 - RLTR26 LTR ERVK -156 486 1 9 1031 2374 186 77 16 chr13 58466886 58467563 -61816749 + RMER19B LTR ERVK 79 902 0 9 1031 1135 64 0 0 chr13 58467563 58467704 -61816608 + B1_Mus2 SINE Alu 1 141 -6 9 1031 324 0 0 0 chr13 58467706 58467742 -61816570 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 9 1031 1440 80 32 0 chr13 58468600 58468788 -61815524 - B2_Mm2 SINE B2 -1 194 1 9 1031 1582 153 42 132 chr13 58468910 58469310 -61815002 - ORR1B2 LTR MaLR -3 364 1 9 1031 243 227 0 0 chr13 58469562 58469606 -61814706 + polypyrimidine Low_complexity Low_complexity 3 46 0 9 1031 654 214 8 31 chr13 58469616 58469712 -61814600 - B1_Mur2 SINE Alu -8 141 45 9 1031 351 0 0 0 chr13 58469712 58469751 -61814561 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 1031 654 214 8 31 chr13 58469751 58469784 -61814528 - B1_Mur2 SINE Alu -105 44 15 9 1031 247 289 62 95 chr13 58469820 58470030 -61814282 - L1MC5 LINE L1 -818 7143 6941 9 1031 785 238 35 5 chr13 58470131 58470334 -61813978 - B3 SINE B2 -6 210 2 9 1031 574 163 251 6 chr13 58470392 58470559 -61813753 + B3 SINE B2 4 211 -5 9 1031 3424 75 11 8 chr13 58470677 58471180 -61813132 + RLTR1C LTR ERV1 1 507 0 9 1031 463 270 15 53 chr13 58471332 58471465 -61812847 - B1F SINE Alu -14 135 8 9 1031 4080 159 92 84 chr13 58471628 58472522 -61811790 - RMER19B LTR ERVK 0 902 2 9 1031 523 278 66 7 chr13 58472552 58472704 -61811608 + B3A SINE B2 4 164 -34 9 1031 267 31 0 0 chr13 58472709 58472741 -61811571 + (CA)n Simple_repeat Simple_repeat 1 32 0 9 1031 699 185 52 7 chr13 58472770 58472906 -61811406 + B1_Mur2 SINE Alu 3 144 -5 9 1031 223 309 22 90 chr13 58473005 58473094 -61811218 + RSINE1 SINE B4 79 161 -4 9 1031 6448 110 10 15 chr13 58473136 58474098 -61810214 - RMER17B LTR ERVK 0 958 1 1 1031 319 281 0 0 chr13 58474185 58474267 -61810045 + ID4_ SINE ID 6 87 -65 1 1031 842 153 43 7 chr13 58474769 58474907 -61809405 - B1_Mus1 SINE Alu -1 147 5 1 1031 511 267 75 40 chr13 58475223 58475422 -61808890 - ID_B1 SINE B4 -17 207 2 1 1031 1397 211 48 28 chr13 58475523 58475875 -61808437 + RLTR10D LTR ERVK 1 359 0 1 1031 19589 258 20 11 chr13 58475875 58481009 -61803303 + IAP-d-int LTR ERVK 1 5176 -1366 1 1031 2499 218 5 24 chr13 58480997 58481594 -61802718 + IAP-d-int LTR ERVK 5474 6059 -483 1 1031 2150 167 24 11 chr13 58481643 58482013 -61802299 + IAP-d-int LTR ERVK 6168 6542 0 1 1031 1436 209 40 23 chr13 58482013 58482366 -61801946 + RLTR10D LTR ERVK 1 359 0 1 1031 258 204 0 35 chr13 58482370 58482435 -61801877 - B3A SINE B2 -136 80 18 1 1031 236 276 0 187 chr13 58482459 58482566 -61801746 - ID_B1 SINE B4 -58 166 80 1 1031 417 256 0 0 chr13 58482642 58482724 -61801588 + ID4 SINE ID 2 83 0 1 1031 671 98 54 0 chr13 58482929 58483041 -61801271 - B1_Mur4 SINE Alu -24 126 9 1 1031 244 225 84 0 chr13 58483567 58483638 -61800674 - PB1D7 SINE Alu -15 105 29 1 1031 1338 115 5 0 chr13 58484085 58484277 -61800035 - B2_Mm1t SINE B2 0 193 1 1 1031 566 171 9 0 chr13 58484300 58484405 -61799907 + B3 SINE B2 25 130 -86 1 1031 413 273 25 0 chr13 58484471 58484592 -61799720 + B3 SINE B2 91 214 -2 1 1031 484 221 155 40 chr13 58484634 58484808 -61799504 - ORR1D2 LTR MaLR -12 358 165 1 1031 1107 89 0 0 chr13 58484934 58485080 -61799232 - B1_Mm SINE Alu -1 146 1 1 1031 460 161 69 0 chr13 58485080 58485167 -61799145 - 4.5SRNA scRNA scRNA -1 93 1 1 1031 213 268 125 0 chr13 58485889 58485945 -61798367 + B1_Mur1 SINE Alu 57 119 -30 1 1031 416 51 0 0 chr13 58485945 58486004 -61798308 - B1_Mur4 SINE Alu -90 60 2 1 1031 264 91 0 0 chr13 58486013 58486057 -61798255 + (T)n Simple_repeat Simple_repeat 1 44 0 1 1031 668 239 35 0 chr13 58487551 58487693 -61796619 - B1_Mur1 SINE Alu -2 147 1 1 1031 1401 310 57 34 chr13 58487703 58487790 -61796522 - L1_Mur3 LINE L1 -1827 4316 4245 1 1031 1154 158 24 9 chr13 58487790 58488001 -61796311 - B3 SINE B2 -2 214 1 1 1031 1724 259 72 25 chr13 58488001 58488680 -61795632 - L1_Mur3 LINE L1 -1899 4244 3510 1 1031 404 303 101 46 chr13 58488769 58489197 -61795115 + L1_Mur3 LINE L1 2315 2790 -3350 1 1031 694 232 19 31 chr13 58489348 58489508 -61794804 + B3 SINE B2 3 160 -56 1 1031 668 211 13 20 chr13 58489698 58489848 -61794464 + B1_Mur2 SINE Alu 1 149 0 1 1031 26 30 0 0 chr13 58490238 58490271 -61794041 + AT_rich Low_complexity Low_complexity 1 33 0 1 1031 522 274 194 0 chr13 58490748 58490996 -61793316 - MTE2b LTR MaLR -15 364 69 1 1031 220 243 71 151 chr13 58491428 58491554 -61792758 + PB1D10 SINE Alu 2 117 0 1 1031 223 287 126 19 chr13 58491677 58491780 -61792532 + B4A SINE B4 63 176 -116 1 1031 253 292 111 0 chr13 58501019 58501091 -61783221 + PB1D10 SINE Alu 1 80 -37 1 1031 189 0 0 0 chr13 58501852 58501873 -61782439 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1031 207 0 0 0 chr13 58504117 58504140 -61780172 + (CGAGG)n Simple_repeat Simple_repeat 5 27 0 3 1031 356 221 76 9 chr13 58504766 58504871 -61779441 - PB1D9 SINE Alu -8 112 1 4 1031 322 184 38 0 chr13 58504896 58504977 -61779335 - PB1D9 SINE Alu -62 87 1 5 1031 1087 63 35 0 chr13 58505013 58505155 -61779157 - B1_Mus1 SINE Alu 0 148 2 6 1031 536 178 16 48 chr13 58505178 58505302 -61779010 - PB1D9 SINE Alu 0 120 1 7 1031 281 195 20 130 chr13 58505214 58505314 -61778998 - B4 SINE B4 -123 169 81 8 1031 236 257 26 106 chr13 58505884 58505997 -61778315 + MT2B2 LTR ERVL 153 256 -328 9 1031 516 181 56 28 chr13 58505903 58506011 -61778301 + PB1D9 SINE Alu 10 120 0 1 1031 377 259 179 0 chr13 58506027 58506139 -61778173 + RSINE1 SINE B4 4 135 -30 1 1031 691 171 41 35 chr13 58506254 58506399 -61777913 - B1_Mus2 SINE Alu -1 146 1 1 1031 207 0 0 0 chr13 58506531 58506554 -61777758 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1 1031 347 298 24 73 chr13 58506575 58506698 -61777614 - RSINE1 SINE B4 -37 128 12 1 1031 452 246 87 8 chr13 58507110 58507237 -61777075 + B1_Mur2 SINE Alu 1 137 -12 1 1031 207 0 0 0 chr13 58507237 58507260 -61777052 + (CAAAA)n Simple_repeat Simple_repeat 4 26 0 1 1031 312 261 107 16 chr13 58507265 58507386 -61776926 + B2_Mm2 SINE B2 2 133 -62 1 1031 503 221 21 0 chr13 58507939 58508034 -61776278 + RSINE1 SINE B4 18 114 -51 1 1031 248 194 129 0 chr13 58508153 58508215 -61776097 - B1_Mus1 SINE Alu -78 70 1 1 1031 24 0 0 0 chr13 58508727 58508751 -61775561 + AT_rich Low_complexity Low_complexity 1 24 0 2 1031 266 412 0 20 chr13 58511266 58511417 -61772895 + RSINE1 SINE B4 17 164 -1 2 1031 220 250 191 0 chr13 58511477 58511545 -61772767 - ID4 SINE ID -2 81 1 2 1031 475 219 32 81 chr13 58511570 58511694 -61772618 - ID_B1 SINE B4 0 224 107 2 1031 234 356 72 50 chr13 58511573 58511712 -61772600 - B1_Mur4 SINE Alu 0 150 9 2 1031 324 149 0 0 chr13 58511713 58511760 -61772552 - ID SINE ID -176 48 2 2 1031 247 250 19 19 chr13 58511720 58511773 -61772539 - ZP3AR Satellite Satellite -130 82 30 2 1031 590 266 29 0 chr13 58511868 58512007 -61772305 + RSINE1 SINE B4 23 165 0 2 1031 277 299 111 9 chr13 58512159 58512267 -61772045 - RSINE1 SINE B4 -33 132 14 2 1031 716 76 57 0 chr13 58512448 58512553 -61771759 + ORR1B1 LTR MaLR 211 321 -8 2 1031 6090 186 98 25 chr13 58512556 58513961 -61770351 + ORR1B1-int LTR MaLR 3 1509 0 2 1031 2261 110 78 17 chr13 58513962 58514322 -61769990 + ORR1B1 LTR MaLR 5 386 -8 2 1031 815 126 87 0 chr13 58514392 58514519 -61769793 - B1_Mur4 SINE Alu -10 140 3 2 1031 889 174 29 11 chr13 58514555 58514729 -61769583 - B2_Mm2 SINE B2 -14 181 5 3 1031 847 81 187 0 chr13 58514943 58515066 -61769246 + B1_Mus2 SINE Alu 1 146 -1 3 1031 301 134 35 58 chr13 58515089 58515176 -61769136 + Lx9 LINE L1 7552 7636 -8 3 1031 950 130 0 40 chr13 58515206 58515358 -61768954 + B1_Mur4 SINE Alu 4 149 -1 3 1031 558 238 0 28 chr13 58515385 58515493 -61768819 + B3A SINE B2 3 107 -91 3 1031 336 246 137 8 chr13 58515511 58515642 -61768670 - Tigger1 DNA MER2_type -1602 816 669 3 1031 304 238 60 0 chr13 58515669 58515762 -61768550 - B1F SINE Alu 0 149 13 3 1031 398 69 0 17 chr13 58515781 58515840 -61768472 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 3 1031 1110 99 0 0 chr13 58515846 58515988 -61768324 - B1_Mus2 SINE Alu -5 142 1 3 1031 1307 250 58 184 chr13 58515988 58516691 -61767621 - Tigger1 DNA MER2_type -1771 647 34 3 1031 2223 211 189 34 chr13 58517665 58517796 -61766516 - RMER19B LTR ERVK -113 789 634 3 1031 1958 184 48 68 chr13 58517796 58518251 -61766061 + RLTR41 LTR ERV1 1 446 0 4 1031 2223 211 189 34 chr13 58518251 58518802 -61765510 - RMER19B LTR ERVK -269 633 1 3 1031 2045 107 64 6 chr13 58518826 58519137 -61765175 - ORR1A4 LTR MaLR 0 329 1 4 1031 937 44 0 0 chr13 58519276 58519390 -61764922 - B1_Mm SINE Alu 0 147 34 4 1031 410 292 73 18 chr13 58519473 58519637 -61764675 + MIR SINE MIR 3 175 -87 4 1031 374 264 33 0 chr13 58519947 58520038 -61764274 - PB1D9 SINE Alu -25 95 2 4 1031 345 24 0 0 chr13 58520384 58520426 -61763886 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1031 27 49 0 0 chr13 58520618 58520659 -61763653 + AT_rich Low_complexity Low_complexity 1 41 0 4 1031 324 0 0 0 chr13 58520678 58520714 -61763598 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1031 378 0 0 0 chr13 58520714 58520755 -61763557 + (GA)n Simple_repeat Simple_repeat 2 43 0 4 1031 522 233 8 77 chr13 58520860 58520990 -61763322 - RSINE1 SINE B4 -2 163 43 4 1031 1172 82 0 0 chr13 58521007 58521153 -61763159 + B1_Mus2 SINE Alu 1 146 -1 5 1031 222 91 0 0 chr13 58521154 58521187 -61763125 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1031 2413 151 38 18 chr13 58521189 58521580 -61762732 - MTC LTR MaLR -22 399 1 5 1031 2415 274 151 17 chr13 58521594 58521935 -61762377 - Lx8 LINE L1 -117 7356 7010 5 1031 2485 71 6 9 chr13 58521935 58522263 -61762049 + ORR1A2 LTR MaLR 1 327 0 5 1031 2415 274 151 17 chr13 58522263 58522824 -61761488 - Lx8 LINE L1 -464 7009 6333 5 1031 342 211 60 35 chr13 58522834 58522975 -61761337 + MTC LTR MaLR 236 421 0 5 1031 1538 253 132 31 chr13 58522975 58523551 -61760761 - Lx8 LINE L1 -514 6959 6326 5 1031 1385 94 0 5 chr13 58524034 58524226 -61760086 - B2_Mm2 SINE B2 0 195 5 5 1031 580 293 29 5 chr13 58524772 58524978 -61759334 + ID_B1 SINE B4 1 211 -13 5 1031 259 333 32 0 chr13 58525020 58525113 -61759199 + MLT1B LTR MaLR 199 294 -96 5 1031 384 22 0 0 chr13 58525365 58525410 -61758902 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1031 360 0 0 0 chr13 58525644 58525684 -61758628 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1031 2466 210 113 20 chr13 58525684 58526268 -61758044 + Lx9 LINE L1 6361 6998 -646 6 1031 1086 223 167 31 chr13 58526256 58526645 -61757667 + Lx9 LINE L1 7196 7637 -7 6 1031 720 187 74 7 chr13 58526654 58526789 -61757523 + B1_Mur2 SINE Alu 1 144 -5 6 1031 327 296 8 57 chr13 58527044 58527166 -61757146 + PB1D10 SINE Alu 2 117 0 6 1031 180 254 109 0 chr13 58528272 58528327 -61755985 - L3 LINE CR1 -4399 90 30 6 1031 223 186 0 0 chr13 58528912 58528955 -61755357 + (TTG)n Simple_repeat Simple_repeat 2 44 0 6 1031 230 166 0 0 chr13 58529185 58529227 -61755085 - tRNA-Ala-GCY_ tRNA tRNA -32 43 2 6 1031 665 251 81 35 chr13 58529276 58529474 -61754838 + B3 SINE B2 4 210 -6 6 1031 699 253 17 23 chr13 58529494 58529668 -61754644 - B3 SINE B2 -30 186 14 6 1031 300 241 63 89 chr13 58529700 58529794 -61754518 + PB1D10 SINE Alu 1 85 -35 7 1031 4505 12 2 0 chr13 58529938 58530430 -61753882 - MT2_Mm LTR ERVL 0 493 1 7 1031 319 0 0 0 chr13 58530430 58530468 -61753844 - MERVL-int LTR ERVL 0 5485 5448 7 1031 385 179 46 35 chr13 58530468 58530555 -61753757 - ORR1A3-int LTR MaLR -1323 640 553 7 1031 41422 16 14 0 chr13 58530555 58535842 -61748470 - MERVL-int LTR ERVL -125 5360 1 7 1031 4505 12 2 0 chr13 58535842 58536334 -61747978 - MT2_Mm LTR ERVL 0 493 1 7 1031 709 187 79 30 chr13 58536446 58536614 -61747698 - B3 SINE B2 -8 187 27 7 1031 237 262 73 98 chr13 58536864 58537078 -61747234 - L1MEf LINE L1 -2750 3794 3593 7 1031 294 29 0 0 chr13 58537078 58537113 -61747199 + (TC)n Simple_repeat Simple_repeat 2 36 0 7 1031 237 262 73 98 chr13 58537113 58537185 -61747127 - L1MEf LINE L1 -2952 3592 3515 7 1031 1108 117 48 67 chr13 58537195 58537405 -61746907 - ORR1D1 LTR MaLR 0 374 169 7 1031 913 142 77 30 chr13 58537426 58537628 -61746684 - ORR1D1 LTR MaLR -169 215 16 7 1031 1475 68 16 16 chr13 58537631 58537825 -61746487 - B2_Mm2 SINE B2 0 195 2 7 1031 724 211 14 7 chr13 58537909 58538052 -61746260 - B1_Mus1 SINE Alu 0 148 5 7 1031 424 202 0 63 chr13 58538082 58538177 -61746135 - B1_Mur1 SINE Alu -2 147 59 7 1031 207 0 0 0 chr13 58538201 58538224 -61746088 + (TG)n Simple_repeat Simple_repeat 1 23 0 8 1031 487 0 32 0 chr13 58538224 58538286 -61746026 + (GA)n Simple_repeat Simple_repeat 1 65 0 8 1031 348 254 24 117 chr13 58538324 58538614 -61745698 - L1MEf LINE L1 -3983 2657 2395 7 1031 660 279 0 19 chr13 58538656 58538817 -61745495 - RSINE1 SINE B4 -6 159 2 8 1031 405 177 0 0 chr13 58538899 58538978 -61745334 + (TG)n Simple_repeat Simple_repeat 2 80 0 8 1031 338 222 11 0 chr13 58539016 58539106 -61745206 + (TA)n Simple_repeat Simple_repeat 1 91 0 8 1031 231 321 12 0 chr13 58539425 58539506 -61744806 - L1MEf LINE L1 -4267 2373 2292 7 1031 240 344 29 37 chr13 58539592 58539728 -61744584 - L1MEf LINE L1 -5774 773 639 7 1031 306 0 0 0 chr13 58540616 58540650 -61743662 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 1031 399 21 0 0 chr13 58540650 58540697 -61743615 + (CA)n Simple_repeat Simple_repeat 1 48 0 8 1031 316 185 62 52 chr13 58540879 58540899 -61743413 - L1M4b LINE L1 -5016 2318 2297 8 1031 950 197 85 15 chr13 58540899 58540934 -61743378 - B3 SINE B2 0 216 166 8 1031 315 0 0 0 chr13 58540934 58540969 -61743343 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1031 950 197 85 15 chr13 58540969 58541134 -61743178 - B3 SINE B2 -51 165 2 8 1031 316 185 62 52 chr13 58541134 58541210 -61743102 - L1M4b LINE L1 -5038 2296 2222 8 1031 696 77 0 0 chr13 58541210 58541301 -61743011 - 5S rRNA rRNA -3 118 28 9 1031 203 207 0 79 chr13 58541339 58541402 -61742910 + C-rich Low_complexity Low_complexity 2 59 0 9 1031 1901 262 169 10 chr13 58541408 58542094 -61742218 - Lx8 LINE L1 -359 7114 6320 9 1031 3159 201 100 76 chr13 58542102 58542983 -61741329 - RMER19B LTR ERVK 0 902 1 9 1031 302 212 45 0 chr13 58543242 58543308 -61741004 - U6 snRNA snRNA -37 70 2 9 1031 677 197 21 42 chr13 58543513 58543656 -61740656 - B1_Mur1 SINE Alu -9 140 1 9 1031 4205 161 141 21 chr13 58543691 58544544 -61739768 + RMER19B LTR ERVK 1 890 -12 9 1031 1206 55 0 7 chr13 58544555 58544694 -61739618 + B1_Mus1 SINE Alu 1 139 -9 9 1031 266 0 29 0 chr13 58544694 58544728 -61739584 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 1031 389 311 36 24 chr13 58544788 58544956 -61739356 + MLT1J1 LTR MaLR 140 309 -135 9 1031 438 20 0 0 chr13 58547220 58547271 -61737041 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 1031 345 47 0 0 chr13 58547286 58547329 -61736983 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1031 677 136 53 26 chr13 58547334 58547447 -61736865 + B1_Mur3 SINE Alu 34 149 0 1 1031 538 252 44 7 chr13 58547574 58547684 -61736628 - B1_Mur1 SINE Alu -6 143 28 1 1031 1557 47 0 16 chr13 58547684 58547877 -61736435 + B2_Mm1t SINE B2 2 191 -2 1 1031 538 252 44 7 chr13 58547877 58547902 -61736410 - B1_Mur1 SINE Alu -122 27 3 1 1031 464 242 22 72 chr13 58548137 58548275 -61736037 - B1F SINE Alu -2 147 17 1 1031 2539 96 23 86 chr13 58548387 58548819 -61735493 + RLTR11B LTR ERVK 1 406 -47 1 1031 2418 134 65 27 chr13 58548819 58549233 -61735079 + RLTR23 LTR ERV1 1 430 0 1 1031 294 95 0 0 chr13 58549607 58549649 -61734663 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1031 568 253 144 40 chr13 58549698 58549900 -61734412 - B4 SINE B4 -69 223 1 1 1031 421 301 42 6 chr13 58549923 58550090 -61734222 - L1MA5 LINE L1 -6 6294 6122 1 1031 267 246 159 0 chr13 58550193 58550344 -61733968 - L1MA5 LINE L1 -350 5950 5768 1 1031 745 182 0 0 chr13 58550391 58550512 -61733800 - B1_Mur1 SINE Alu -5 144 24 1 1031 29 0 0 0 chr13 58550660 58550689 -61733623 + AT_rich Low_complexity Low_complexity 1 29 0 1 1031 461 303 13 13 chr13 58550769 58550923 -61733389 + RSINE1 SINE B4 4 157 -8 1 1031 489 161 0 0 chr13 58553192 58553279 -61731033 + (TA)n Simple_repeat Simple_repeat 2 88 0 1 1031 530 41 0 14 chr13 58553547 58553621 -61730691 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 1 1031 1034 81 0 0 chr13 58553795 58553931 -61730381 + B1_Mus1 SINE Alu 1 136 -12 1 1031 549 0 0 0 chr13 58554936 58554997 -61729315 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1031 243 0 0 0 chr13 58555735 58555762 -61728550 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1031 195 220 31 78 chr13 58555762 58555826 -61728486 - MIR SINE MIR -133 143 82 1 1031 543 209 9 0 chr13 58556475 58556585 -61727727 - Tigger7 DNA MER2_type -2374 117 7 1 1031 609 272 12 18 chr13 58556846 58557011 -61727301 + RSINE1 SINE B4 2 165 0 1 1031 716 214 60 25 chr13 58557307 58557508 -61726804 + B3 SINE B2 1 208 -8 1 1031 569 284 57 54 chr13 58557876 58558192 -61726120 - L1MA4 LINE L1 -290 6001 5685 1 1031 260 340 19 29 chr13 58558639 58558742 -61725570 + B3 SINE B2 102 203 -13 1 1031 285 279 0 25 chr13 58558916 58558997 -61725315 - MER57-int LTR ERV1 -292 7245 7167 1 1031 27 0 0 0 chr13 58559204 58559231 -61725081 + AT_rich Low_complexity Low_complexity 1 27 0 1 1031 348 83 0 0 chr13 58559562 58559610 -61724702 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1031 293 229 32 16 chr13 58559611 58559673 -61724639 - ID4 SINE ID -19 64 2 1 1031 230 270 0 75 chr13 58559777 58559857 -61724455 - MLT1H LTR MaLR -465 84 11 1 1031 1734 16 0 0 chr13 58560123 58560313 -61723999 - B2_Mm1a SINE B2 -2 191 2 1 1031 353 126 35 26 chr13 58560806 58560920 -61723392 + (CCAA)n Simple_repeat Simple_repeat 1 115 0 1 1031 768 226 7 0 chr13 58561017 58561154 -61723158 + B1_Mus2 SINE Alu 10 147 0 1 1031 777 319 33 10 chr13 58561357 58561664 -61722648 - Tigger10 DNA Tigger -49 1794 1481 1 1031 543 211 83 11 chr13 58561885 58562087 -61722225 - L1MA7 LINE L1 -6 6294 6079 1 1031 863 80 0 8 chr13 58562403 58562529 -61721783 + (TTCC)n Simple_repeat Simple_repeat 3 127 0 1 1031 561 30 0 0 chr13 58562603 58562670 -61721642 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1031 378 256 130 16 chr13 58563366 58563489 -61720823 + RSINE1 SINE B4 2 138 -27 1 1031 260 299 147 30 chr13 58563595 58563895 -61720417 - L1M5 LINE L1 -230 5894 5560 1 1031 238 206 27 0 chr13 58564626 58564699 -61719613 + GA-rich Low_complexity Low_complexity 3 77 0 1 1031 8096 67 9 4 chr13 58565031 58566049 -61718263 - RLTR13D5 LTR ERVK 0 1023 1 1 1031 357 125 0 0 chr13 58566437 58566493 -61717819 + (TTTTC)n Simple_repeat Simple_repeat 3 58 0 1 1031 186 43 0 0 chr13 58566905 58566928 -61717384 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1031 212 244 0 25 chr13 58567117 58567197 -61717115 + (CATA)n Simple_repeat Simple_repeat 3 80 0 1 1031 232 281 18 0 chr13 58567652 58567709 -61716603 - MER5A DNA MER1_type -131 58 1 1 1031 323 250 12 0 chr13 58567765 58567845 -61716467 + ID2 SINE ID 1 81 -2 1 1031 405 286 48 77 chr13 58567897 58568105 -61716207 + MLT1A LTR MaLR 19 220 -154 1 1031 202 227 0 22 chr13 58568477 58568522 -61715790 + MER5A DNA MER1_type 138 181 -8 1 1031 464 368 34 6 chr13 58569077 58569252 -61715060 - MER2 DNA MER2_type -63 282 103 1 1031 360 0 0 0 chr13 58569284 58569324 -61714988 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 1031 591 150 40 32 chr13 58569328 58569452 -61714860 - RLTR25B LTR ERVK -10 1018 894 1 1031 3619 124 107 79 chr13 58569430 58570069 -61714243 - RLTR25B LTR ERVK -255 773 117 1 1031 279 0 0 0 chr13 58570069 58570100 -61714212 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1031 3619 124 107 79 chr13 58570100 58570207 -61714105 - RLTR25B LTR ERVK -912 116 6 1 1031 516 32 0 0 chr13 58570215 58570277 -61714035 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1031 532 157 167 0 chr13 58570280 58570388 -61713924 - B1_Mur2 SINE Alu -19 130 5 1 1031 507 194 70 31 chr13 58570660 58570788 -61713524 - B1_Mus2 SINE Alu -1 146 14 1 1031 359 289 0 30 chr13 58570707 58570807 -61713505 - ID_B1 SINE B4 -49 175 79 1 1031 935 102 45 115 chr13 58570801 58571001 -61713311 - B2_Mm2 SINE B2 -8 187 2 1 1031 1349 88 17 0 chr13 58571812 58571993 -61712319 + B2_Mm2 SINE B2 6 189 -6 1 1031 664 172 0 32 chr13 58572054 58572180 -61712132 + ORR1B2 LTR MaLR 160 281 -86 1 1031 302 310 58 0 chr13 58572181 58572268 -61712044 + ORR1E LTR MaLR 56 147 -212 1 1031 216 0 0 0 chr13 58572588 58572612 -61711700 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1031 248 282 0 90 chr13 58572813 58572891 -61711421 + RSINE1 SINE B4 95 165 0 1 1031 195 42 0 0 chr13 58573867 58573891 -61710421 + (CG)n Simple_repeat Simple_repeat 2 25 0 1 1031 252 0 0 0 chr13 58573891 58573918 -61710394 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1031 21 36 0 0 chr13 58574319 58574347 -61709965 + AT_rich Low_complexity Low_complexity 1 28 0 1 1031 423 228 61 98 chr13 58574588 58574711 -61709601 + MT2A LTR ERVL 405 563 0 1 1031 1339 91 11 0 chr13 58574905 58575081 -61709231 + B2_Mm1t SINE B2 1 178 -15 1 1031 303 125 313 34 chr13 58575111 58575226 -61709086 + B2_Mm2 SINE B2 49 195 0 1 1031 234 354 43 33 chr13 58575844 58576028 -61708284 + L1MC LINE L1 5634 5819 -514 1 1031 232 146 0 59 chr13 58575999 58576050 -61708262 + L1M4 LINE L1 5791 5838 -340 1 1031 790 131 249 0 chr13 58576255 58576556 -61707756 - RLTR23 LTR ERV1 -10 420 6 1 1031 1400 89 16 0 chr13 58576569 58576759 -61707553 - B2_Mm2 SINE B2 0 195 3 1 1031 297 248 71 0 chr13 58577643 58577756 -61706556 + (CCCCAG)n Simple_repeat Simple_repeat 4 124 0 1 1031 2109 293 55 12 chr13 58577756 58577814 -61706498 - Lx8 LINE L1 -60 7413 7345 1 1031 231 36 0 0 chr13 58577814 58577842 -61706470 + (TC)n Simple_repeat Simple_repeat 2 29 0 1 1031 2109 293 55 12 chr13 58577842 58578526 -61705786 - Lx8 LINE L1 -129 7344 6641 1 1031 1144 190 75 132 chr13 58579133 58579533 -61704779 + MTE2a LTR MaLR 3 379 0 1 1031 22 0 0 0 chr13 58579671 58579693 -61704619 + AT_rich Low_complexity Low_complexity 1 22 0 1 1031 197 211 18 0 chr13 58580298 58580355 -61703957 + CT-rich Low_complexity Low_complexity 2 59 0 1 1031 751 280 43 106 chr13 58580363 58580752 -61703560 + MTD LTR MaLR 35 366 -13 1 1031 713 148 8 0 chr13 58580814 58580942 -61703370 + CT-rich Low_complexity Low_complexity 2 130 0 1 1031 300 137 0 0 chr13 58581424 58581475 -61702837 + (CCA)n Simple_repeat Simple_repeat 3 53 0 1 1031 492 18 0 0 chr13 58582270 58582327 -61701985 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 1031 456 262 9 1 chr13 58582510 58582632 -61701680 - MTD LTR MaLR -299 122 1 1 1031 24 0 0 0 chr13 58583864 58583888 -61700424 + AT_rich Low_complexity Low_complexity 1 24 0 1 1031 537 175 39 0 chr13 58583891 58583994 -61700318 - RMER1A Other Other -3 1027 921 1 1031 2472 224 34 48 chr13 58584584 58585679 -61698633 - RMER1B Other Other -132 934 7 1 1031 441 206 90 30 chr13 58585969 58586069 -61698243 - PB1D10 SINE Alu -1 116 11 1 1031 618 269 52 62 chr13 58586352 58586546 -61697766 - B3A SINE B2 -3 195 4 1 1031 23 54 0 0 chr13 58587135 58587172 -61697140 + AT_rich Low_complexity Low_complexity 1 37 0 1 1031 35 24 0 0 chr13 58587206 58587248 -61697064 + AT_rich Low_complexity Low_complexity 1 42 0 1 1031 23 0 0 0 chr13 58587569 58587592 -61696720 + AT_rich Low_complexity Low_complexity 1 23 0 1 1031 345 310 20 0 chr13 58587702 58587802 -61696510 - RSINE1 SINE B4 -48 117 16 1 1031 246 62 0 0 chr13 58588476 58588508 -61695804 + (G)n Simple_repeat Simple_repeat 1 32 0 1 128 3142 36 33 15 chr13 58588864 58589257 -61695055 - MTB LTR MaLR 0 400 1 1 1032 257 279 111 37 chr13 58589295 58589403 -61694909 - B1F SINE Alu -30 119 4 1 1032 2280 100 25 19 chr13 58589569 58589894 -61694418 + ORR1A2 LTR MaLR 1 327 0 1 1032 901 145 14 14 chr13 58590095 58590235 -61694077 - B1_Mur4 SINE Alu 0 150 11 1 1032 2764 133 34 102 chr13 58590239 58590798 -61693514 - RLTR28 LTR ERVL -2 522 2 1 1032 453 19 0 0 chr13 58590987 58591041 -61693271 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1032 246 281 81 30 chr13 58591302 58591401 -61692911 + MER5A DNA MER1_type 26 129 -60 1 1032 1302 193 224 6 chr13 58591577 58591921 -61692391 + MTD LTR MaLR 1 419 0 1 1032 238 250 0 64 chr13 58591922 58592016 -61692296 - L1MA5 LINE L1 -12 6288 6201 2 1032 688 312 84 42 chr13 58592069 58592547 -61691765 + L1_Mur3 LINE L1 5207 5704 -176 2 1032 183 42 0 0 chr13 58592993 58593017 -61691295 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1032 812 149 92 60 chr13 58593030 58593215 -61691097 + B2_Mm2 SINE B2 2 192 -3 2 1032 240 289 40 20 chr13 58593315 58593414 -61690898 + L1M3 LINE L1 2185 2285 -3855 2 1032 249 159 120 43 chr13 58593532 58593624 -61690688 + L1M2 LINE L1 5784 5882 -409 2 1032 560 225 70 0 chr13 58593674 58593803 -61690509 - B1_Mur2 SINE Alu 0 149 12 2 1032 591 235 0 3 chr13 58593827 58594175 -61690137 + (TG)n Simple_repeat Simple_repeat 1 346 0 2 1032 242 263 37 62 chr13 58594528 58594566 -61689746 + MLT1A1 LTR MaLR 305 339 -69 2 1032 2893 124 148 12 chr13 58594566 58595081 -61689231 - RMER4B LTR ERVK 0 585 1 2 1032 242 263 37 62 chr13 58595081 58595123 -61689189 + MLT1A1 LTR MaLR 340 383 -25 2 1032 351 283 44 62 chr13 58595704 58595817 -61688495 - B4A SINE B4 -181 111 1 2 1032 1278 27 0 0 chr13 58595853 58596000 -61688312 + B1_Mus2 SINE Alu 1 147 0 2 1032 430 322 83 79 chr13 58596085 58596375 -61687937 + MamRep4096 DNA hAT? 119 409 -17 2 1032 204 40 0 0 chr13 58596510 58596535 -61687777 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 1032 236 211 10 40 chr13 58596653 58596752 -61687560 + CT-rich Low_complexity Low_complexity 1 96 0 2 1032 439 259 8 25 chr13 58596759 58596878 -61687434 - PB1D10 SINE Alu 0 117 1 2 1032 228 120 60 0 chr13 58597138 58597188 -61687124 + (CACTA)n Simple_repeat Simple_repeat 3 55 0 2 1032 207 0 0 0 chr13 58597235 58597258 -61687054 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1032 564 227 109 0 chr13 58597700 58597828 -61686484 - B1_Mur1 SINE Alu -5 144 3 2 1032 231 293 64 108 chr13 58597828 58597922 -61686390 - MT2B LTR ERVL -439 162 78 2 1032 810 46 28 0 chr13 58598518 58598626 -61685686 - B1_Mus1 SINE Alu 0 148 38 2 1032 227 327 92 46 chr13 58598705 58598814 -61685498 - RSINE1 SINE B4 0 165 52 2 1032 431 219 185 52 chr13 58599010 58599145 -61685167 - RSINE1 SINE B4 0 165 13 2 1032 3100 51 20 18 chr13 58600002 58600401 -61683911 + MTB LTR MaLR 1 400 0 2 1032 256 248 26 129 chr13 58600645 58600661 -61683651 + MT2B2 LTR ERVL 156 159 -425 2 1032 452 200 66 44 chr13 58600661 58600797 -61683515 + B1F1 SINE Alu 1 139 -10 2 1032 492 176 7 45 chr13 58601000 58601155 -61683157 + G-rich Low_complexity Low_complexity 6 154 0 2 1032 255 213 12 62 chr13 58601303 58601383 -61682929 - B1_Mur4 SINE Alu -10 140 65 2 1032 333 0 0 0 chr13 58601414 58601451 -61682861 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1032 715 278 142 4 chr13 58601820 58602073 -61682239 - MLT1J LTR MaLR -205 307 20 2 1032 477 50 0 0 chr13 58602981 58603041 -61681271 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1032 363 254 96 24 chr13 58603272 58603397 -61680915 + MER63C DNA AcHobo 695 828 -102 2 1032 585 196 90 19 chr13 58603402 58603558 -61680754 - L1_Mur3 LINE L1 -1310 4570 4404 2 1032 234 128 0 0 chr13 58603606 58603645 -61680667 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1032 2081 80 0 199 chr13 58604070 58604137 -61680175 - ORR1A2 LTR MaLR -1 326 260 2 1032 1086 96 120 0 chr13 58604137 58604304 -61680008 - B2_Mm1t SINE B2 -5 188 2 2 1032 2081 80 0 199 chr13 58604304 58604333 -61679979 - ORR1A2 LTR MaLR -68 259 256 2 1032 1153 77 7 0 chr13 58604333 58604476 -61679836 - B1_Mus1 SINE Alu -3 145 2 2 1032 2081 80 0 199 chr13 58604476 58604785 -61679527 - ORR1A2 LTR MaLR -72 255 1 2 1032 543 186 34 17 chr13 58605301 58605476 -61678836 + (TATG)n Simple_repeat Simple_repeat 1 178 0 2 1032 268 276 0 0 chr13 58605476 58605534 -61678778 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1032 232 286 122 19 chr13 58606395 58606502 -61677810 - MER91C DNA Tip100 -21 119 2 2 1032 224 0 125 0 chr13 58607064 58607120 -61677192 + (TGGA)n Simple_repeat Simple_repeat 2 64 0 2 1032 192 77 0 0 chr13 58607476 58607502 -61676810 + (CG)n Simple_repeat Simple_repeat 2 27 0 2 1032 390 42 0 0 chr13 58607502 58607550 -61676762 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1032 22 0 0 0 chr13 58607688 58607710 -61676602 + AT_rich Low_complexity Low_complexity 1 22 0 2 1032 454 298 73 82 chr13 58609298 58609613 -61674699 - L1ME2 LINE L1 -8 6156 5845 2 1032 483 261 36 54 chr13 58609955 58610121 -61674191 + RLTR14 LTR ERV1 220 382 0 2 1032 320 309 85 58 chr13 58610286 58610475 -61673837 - B3 SINE B2 -1 215 1 2 1032 509 168 0 9 chr13 58610917 58611025 -61673287 + CT-rich Low_complexity Low_complexity 3 109 0 2 1032 355 163 51 61 chr13 58611034 58611132 -61673180 - B1_Mur4 SINE Alu 0 150 54 2 1032 637 226 32 91 chr13 58611110 58611409 -61672903 + RMER10A LTR ERVL 18 429 -13 2 1032 349 207 71 35 chr13 58611409 58611431 -61672881 - B1_Mus1 SINE Alu -22 126 107 2 1032 2798 50 53 0 chr13 58611431 58611772 -61672540 - RLTR10D LTR ERVK 0 359 1 2 1032 637 222 38 114 chr13 58611772 58611784 -61672528 + RMER10A LTR ERVL 430 441 -1 2 1032 349 207 71 35 chr13 58611784 58611834 -61672478 - B1_Mus1 SINE Alu -42 106 39 2 1032 3350 48 2 2 chr13 58611836 58612236 -61672076 - MTB LTR MaLR 0 400 1 2 1032 411 21 0 0 chr13 58612410 58612458 -61671854 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1032 3005 133 30 32 chr13 58613166 58613694 -61670618 + RLTR11A2 LTR ERVK 1 527 0 2 1032 1123 89 7 0 chr13 58613875 58614021 -61670291 + B1_Mus1 SINE Alu 2 148 0 2 1032 288 111 0 0 chr13 58614021 58614066 -61670246 + (GGA)n Simple_repeat Simple_repeat 3 47 0 2 1032 235 118 12 50 chr13 58614114 58614194 -61670118 + (TATAA)n Simple_repeat Simple_repeat 5 81 0 2 1032 296 70 35 17 chr13 58614349 58614407 -61669905 - B2_Mm2 SINE B2 0 195 137 2 1032 391 108 0 22 chr13 58614396 58614462 -61669850 - B2_Mm2 SINE B2 -107 109 47 2 1032 1325 58 40 0 chr13 58614508 58614682 -61669630 - B2_Mm2 SINE B2 -13 182 2 2 1032 351 221 125 58 chr13 58615339 58615459 -61668853 - RMER15 LTR ERVL -154 421 294 2 1032 206 200 0 0 chr13 58615487 58615522 -61668790 + polypurine Low_complexity Low_complexity 2 36 0 2 1032 212 0 36 0 chr13 58615990 58616018 -61668294 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2 1032 1071 60 0 0 chr13 58616018 58616152 -61668160 - B1_Mus1 SINE Alu -8 140 7 2 1032 25 31 0 0 chr13 58616164 58616196 -61668116 + AT_rich Low_complexity Low_complexity 1 32 0 2 1032 321 89 0 0 chr13 58616208 58616253 -61668059 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1032 564 233 227 0 chr13 58616576 58616752 -61667560 + B3 SINE B2 1 216 0 2 1032 897 180 112 15 chr13 58617437 58617634 -61666678 + B3 SINE B2 1 216 0 2 1032 392 162 14 0 chr13 58617750 58617824 -61666488 - B3 SINE B2 -68 148 74 2 1032 359 335 109 38 chr13 58617869 58618080 -61666232 + MLT1H1 LTR MaLR 32 257 -298 2 1032 222 37 0 0 chr13 58618606 58618633 -61665679 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1032 260 237 117 13 chr13 58618692 58618769 -61665543 - MIRb SINE MIR -140 128 44 2 1032 315 302 112 48 chr13 58618981 58619169 -61665143 + Helitron1Na_Mam RC Helitron 33 232 -830 2 1032 396 215 62 41 chr13 58619202 58619299 -61665013 + RSINE1 SINE B4 40 138 -27 2 1032 255 364 44 29 chr13 58619405 58619609 -61664703 + Helitron1Nb_Mam RC Helitron 365 571 -545 2 1032 943 227 136 8 chr13 58619862 58620120 -61664192 + B4 SINE B4 1 291 -1 2 1032 528 93 0 0 chr13 58620603 58620678 -61663634 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 1032 657 300 133 56 chr13 58621009 58621602 -61662710 - L1MB7 LINE L1 -13 6171 5533 2 1032 189 0 0 0 chr13 58621616 58621637 -61662675 + (CACCC)n Simple_repeat Simple_repeat 2 22 0 2 1032 300 111 0 0 chr13 58621691 58621736 -61662576 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1032 183 100 0 0 chr13 58621780 58621810 -61662502 + (GAAA)n Simple_repeat Simple_repeat 4 33 0 2 1032 515 101 25 12 chr13 58622616 58622696 -61661616 + B1_Mur4 SINE Alu 70 150 0 2 1032 858 124 0 37 chr13 58623013 58623147 -61661165 - B3 SINE B2 -86 130 2 2 1032 192 40 0 0 chr13 58623548 58623573 -61660739 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1032 298 224 39 26 chr13 58625579 58625657 -61658655 + MTD LTR MaLR 12 90 -329 2 1032 198 0 0 0 chr13 58625659 58625681 -61658631 + (TG)n Simple_repeat Simple_repeat 1 22 0 2 1032 447 180 277 2 chr13 58625686 58625816 -61658496 + MTD LTR MaLR 229 392 -29 2 1032 595 236 130 31 chr13 58626037 58626216 -61658096 - B3A SINE B2 -5 193 16 2 1032 255 250 47 23 chr13 58626321 58626407 -61657905 - RLTR12B LTR ERVK -20 508 421 2 1032 1856 159 16 10 chr13 58626427 58626738 -61657574 + ORR1B1 LTR MaLR 41 353 -41 2 1032 1089 75 0 14 chr13 58626738 58626886 -61657426 + B1_Mus1 SINE Alu 2 147 -1 2 1032 432 73 0 0 chr13 58626909 58626964 -61657348 + ORR1B1 LTR MaLR 340 394 0 2 1032 1969 200 68 26 chr13 58627087 58628001 -61656311 - RMER12 LTR ERVK -135 1187 1 2 1032 229 231 24 64 chr13 58628015 58628140 -61656172 - RLTR11A2 LTR ERVK -128 325 206 2 1032 533 253 48 169 chr13 58628127 58628258 -61656054 - RLTR11A2 LTR ERVK -267 260 152 2 1032 1626 42 0 0 chr13 58628258 58628450 -61655862 - B2_Mm1a SINE B2 0 193 2 2 1032 533 253 48 169 chr13 58628450 58628613 -61655699 - RLTR11A2 LTR ERVK -376 151 2 2 1032 3065 82 19 0 chr13 58629312 58629725 -61654587 + BGLII LTR ERVK 1 421 0 2 1032 3028 40 69 3 chr13 58629762 58630137 -61654175 + MTB LTR MaLR 1 400 0 2 1032 711 126 335 35 chr13 58630352 58630525 -61653787 - URR1B DNA MER1_type 0 225 1 2 1032 492 18 0 0 chr13 58631456 58631513 -61652799 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1032 228 165 424 11 chr13 58631532 58631624 -61652688 - B3A SINE B2 -38 160 31 2 1032 21 57 0 0 chr13 58631674 58631709 -61652603 + AT_rich Low_complexity Low_complexity 1 35 0 2 1032 1039 244 14 0 chr13 58631714 58631927 -61652385 + B3 SINE B2 1 216 0 2 1032 46 19 0 0 chr13 58632012 58632065 -61652247 + AT_rich Low_complexity Low_complexity 1 53 0 3 1032 859 156 0 20 chr13 58632243 58632393 -61651919 - B1_Mur2 SINE Alu -1 148 2 3 1032 524 108 0 0 chr13 58632553 58632627 -61651685 - B3A SINE B2 -123 75 2 3 1032 1227 48 0 0 chr13 58632904 58633051 -61651261 + B1_Mus2 SINE Alu 1 147 0 3 1032 828 261 41 63 chr13 58633408 58633629 -61650683 - B3 SINE B2 0 216 1 3 1032 255 327 91 45 chr13 58633651 58633827 -61650485 + MIR SINE MIR 58 241 -21 3 1032 348 24 0 0 chr13 58633857 58633898 -61650414 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1032 665 206 89 18 chr13 58634332 58634500 -61649812 - B3A SINE B2 -16 182 3 3 1032 22 35 0 0 chr13 58634737 58634766 -61649546 + AT_rich Low_complexity Low_complexity 1 29 0 3 1032 1461 74 11 5 chr13 58634766 58634957 -61649355 - B2_Mm1t SINE B2 0 193 2 3 1032 3243 29 3 10 chr13 58635089 58635475 -61648837 + L1Md_F2 LINE L1 6199 6581 -1 3 1032 417 183 78 3 chr13 58635493 58635586 -61648726 + B1_Mur3 SINE Alu 1 117 0 3 1032 217 158 0 50 chr13 58635593 58635653 -61648659 + A-rich Low_complexity Low_complexity 1 57 0 3 1032 442 125 0 33 chr13 58636395 58636486 -61647826 + C-rich Low_complexity Low_complexity 5 92 0 3 1032 450 0 0 0 chr13 58636893 58636943 -61647369 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1032 907 276 136 17 chr13 58637033 58637328 -61646984 + MTE2b LTR MaLR 1 330 -49 3 1032 1011 244 112 40 chr13 58637329 58637704 -61646608 + MT2A LTR ERVL 3 442 -91 3 1032 288 0 0 0 chr13 58637704 58637736 -61646576 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1032 228 264 71 81 chr13 58637736 58637759 -61646553 + MT2A LTR ERVL 400 418 -57 3 1032 1793 130 88 85 chr13 58638224 58638577 -61645735 + ORR1B1 LTR MaLR 41 394 0 3 1032 1135 96 0 0 chr13 58638902 58639048 -61645264 + B1_Mus2 SINE Alu 2 147 0 3 1032 210 281 0 0 chr13 58639908 58639965 -61644347 - ID4_ SINE ID -25 58 2 3 1032 236 351 18 0 chr13 58641215 58641326 -61642986 + (TATATG)n Simple_repeat Simple_repeat 2 114 0 3 1032 1324 98 0 21 chr13 58641769 58641956 -61642356 - B2_Mm2 SINE B2 0 195 13 3 1032 1169 62 7 14 chr13 58642454 58642602 -61641710 - B1_Mus1 SINE Alu 0 148 2 3 1032 228 273 0 0 chr13 58642653 58642741 -61641571 + (CA)n Simple_repeat Simple_repeat 1 88 0 3 1032 1374 91 32 0 chr13 58643382 58643569 -61640743 + B2_Mm2 SINE B2 1 193 -2 3 1032 191 264 176 0 chr13 58644918 58645009 -61639303 - MIRb SINE MIR -141 127 21 3 1032 198 0 0 0 chr13 58646071 58646093 -61638219 + (CAGA)n Simple_repeat Simple_repeat 3 24 0 3 1032 244 281 20 59 chr13 58646263 58646365 -61637947 + L1MC LINE L1 5351 5448 -2434 3 1032 1469 59 0 11 chr13 58648137 58648324 -61635988 + B2_Mm2 SINE B2 2 186 -9 3 1032 351 86 35 0 chr13 58648340 58648398 -61635914 - Lx4A LINE L1 -1 7057 6998 3 1032 266 219 31 15 chr13 58648408 58648473 -61635839 + B1_Mur2 SINE Alu 37 102 -47 3 1032 450 0 0 0 chr13 58648485 58648535 -61635777 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 1032 507 191 21 0 chr13 58648551 58648645 -61635667 + PB1D9 SINE Alu 23 118 -2 3 1032 637 251 127 11 chr13 58648649 58648838 -61635474 + B3 SINE B2 3 213 -3 3 1032 381 176 0 0 chr13 58649284 58649358 -61634954 + CT-rich Low_complexity Low_complexity 2 75 0 3 1032 363 189 102 35 chr13 58649363 58649467 -61634845 - B1F1 SINE Alu -23 125 17 3 1032 1671 193 39 39 chr13 58649888 58650303 -61634009 - MTD LTR MaLR 0 419 5 3 1032 271 202 309 0 chr13 58650357 58650441 -61633871 + RLTR18B LTR ERVK 402 511 -1 3 1032 1539 192 99 12 chr13 58650441 58650763 -61633549 - MTC LTR MaLR -71 350 1 3 1032 2238 113 3 0 chr13 58651033 58651351 -61632961 - ORR1A2 LTR MaLR -8 319 1 3 1032 704 229 158 22 chr13 58651383 58651566 -61632746 + B3 SINE B2 2 209 -7 3 1032 291 214 50 59 chr13 58652217 58652336 -61631976 - MTC-int LTR MaLR -598 660 543 3 1032 735 204 92 0 chr13 58652336 58652488 -61631824 - Lx8 LINE L1 -498 6975 6810 3 1032 338 284 179 26 chr13 58652493 58652688 -61631624 + Lx8 LINE L1 7239 7463 -10 3 1032 339 25 0 0 chr13 58652721 58652761 -61631551 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1032 628 213 33 0 chr13 58652767 58652889 -61631423 + B1_Mur1 SINE Alu 1 126 -23 3 1032 365 328 88 93 chr13 58652980 58653323 -61630989 - ORR1E LTR MaLR -15 344 4 3 1032 467 33 0 16 chr13 58653376 58653438 -61630874 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1032 462 314 79 85 chr13 58653822 58654004 -61630308 + L1MC4 LINE L1 933 1114 -5101 3 1032 1260 48 0 0 chr13 58654004 58654151 -61630161 + B1_Mus2 SINE Alu 1 147 0 3 1032 462 314 76 78 chr13 58654151 58654297 -61630015 + L1MC4 LINE L1 1115 1246 -4969 3 1032 1163 69 0 0 chr13 58654413 58654558 -61629754 + B1_Mm SINE Alu 2 146 -1 3 1032 242 285 206 12 chr13 58654665 58654825 -61629487 - Kanga1d DNA Tc2 -159 450 260 3 1032 1261 34 0 0 chr13 58655115 58655262 -61629050 + B1_Mus2 SINE Alu 1 147 0 3 1032 460 241 27 0 chr13 58655405 58655517 -61628795 - PB1D10 SINE Alu -2 115 1 3 1032 765 261 231 38 chr13 58655639 58656141 -61628171 + Lx8 LINE L1 6874 7472 -1 3 1032 252 0 0 0 chr13 58656550 58656578 -61627734 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1032 468 0 0 0 chr13 58656578 58656629 -61627683 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 3 1032 417 192 8 16 chr13 58656651 58656778 -61627534 + (TA)n Simple_repeat Simple_repeat 2 127 0 3 1032 707 253 61 10 chr13 58657454 58657650 -61626662 + B3 SINE B2 5 210 -6 3 1032 1098 78 120 0 chr13 58657979 58658146 -61626166 + B2_Mm2 SINE B2 2 188 -7 3 1032 257 145 125 31 chr13 58659475 58659539 -61624773 + RMER15 LTR ERVL 506 575 0 3 1032 371 222 176 12 chr13 58660977 58661146 -61623166 + L1M4 LINE L1 5219 5418 -926 3 1032 270 241 96 0 chr13 58661152 58661235 -61623077 + MTEa LTR MaLR 287 377 -2 3 1032 332 43 22 0 chr13 58662010 58662056 -61622256 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1032 1282 234 125 11 chr13 58663246 58663621 -61620691 + MTD LTR MaLR 2 419 0 3 1032 235 281 162 19 chr13 58664927 58665032 -61619280 + MLT1A0 LTR MaLR 226 345 -20 3 1032 420 260 37 28 chr13 58665213 58665320 -61618992 - B1F SINE Alu -39 110 3 3 1032 243 267 17 0 chr13 58665267 58665327 -61618985 - B4A SINE B4 -151 141 81 3 1032 1825 87 42 184 chr13 58665588 58665969 -61618343 + ORR1A2 LTR MaLR 1 327 0 3 1032 254 306 57 75 chr13 58666759 58666918 -61617394 - RSINE1 SINE B4 0 165 10 3 1032 602 273 75 0 chr13 58668136 58668295 -61616017 + MT2A LTR ERVL 2 172 -361 3 1032 366 69 35 0 chr13 58668295 58668353 -61615959 + B1_Mur4 SINE Alu 1 60 -90 3 1032 329 229 0 12 chr13 58668361 58668445 -61615867 + GA-rich Low_complexity Low_complexity 1 83 0 3 1032 275 131 91 7 chr13 58668470 58668624 -61615688 + (CAGG)n Simple_repeat Simple_repeat 2 168 0 3 1032 307 209 6 39 chr13 58668649 58668828 -61615484 + GA-rich Low_complexity Low_complexity 8 180 0 3 1032 268 157 96 113 chr13 58668878 58668993 -61615319 + RLTR25B LTR ERVK 397 509 -519 3 1032 851 38 9 0 chr13 58668930 58669036 -61615276 + B1_Mus2 SINE Alu 41 147 0 3 1032 1050 258 36 12 chr13 58669067 58669314 -61614998 + MT2A LTR ERVL 190 442 -91 3 1032 210 333 98 16 chr13 58669572 58669694 -61614618 - MER5A DNA MER1_type -7 182 51 3 1032 185 196 83 42 chr13 58669705 58669753 -61614559 + MER5A DNA MER1_type 140 189 0 3 1032 315 262 66 28 chr13 58669814 58669920 -61614392 - MER58A DNA MER1_type -114 110 1 3 1032 3210 19 16 5 chr13 58670210 58670585 -61613727 + L1Md_F2 LINE L1 6202 6580 -2 3 1032 195 308 0 0 chr13 58672362 58672453 -61611859 + (CA)n Simple_repeat Simple_repeat 2 92 0 3 1032 436 264 65 40 chr13 58672458 58672659 -61611653 - RMER12 LTR ERVK -334 988 783 3 1032 380 257 191 0 chr13 58673133 58673285 -61611027 - B3A SINE B2 -15 183 3 3 1032 1316 50 60 6 chr13 58673626 58673808 -61610504 + B2_Mm1a SINE B2 2 193 0 3 1032 863 225 22 91 chr13 58674309 58674539 -61609773 + B3 SINE B2 3 216 0 3 1032 369 43 0 0 chr13 58674884 58674931 -61609381 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 1032 215 61 0 29 chr13 58675470 58675504 -61608808 + (TTA)n Simple_repeat Simple_repeat 2 34 0 3 1032 254 197 273 13 chr13 58675504 58675581 -61608731 - ID_B1 SINE B4 -10 214 118 3 1032 1084 303 36 64 chr13 58676271 58676659 -61607653 + MTE2a LTR MaLR 1 377 -2 3 1032 372 298 108 44 chr13 58676691 58676849 -61607463 - Lx8 LINE L1 -461 7012 6845 3 1032 195 69 0 0 chr13 58676878 58676907 -61607405 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1032 603 258 88 15 chr13 58677604 58677809 -61606503 + ID_B1 SINE B4 3 222 -2 3 1032 306 157 0 38 chr13 58679041 58679094 -61605218 + HAL1-3A_ME LINE L1 1977 2027 -831 3 1032 651 133 0 0 chr13 58680153 58680258 -61604054 + (TTCC)n Simple_repeat Simple_repeat 3 107 0 3 1032 780 150 13 8 chr13 58680329 58680463 -61603849 + B1_Mur2 SINE Alu 3 142 -7 3 1032 504 0 0 0 chr13 58680464 58680520 -61603792 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 3 1032 200 54 53 26 chr13 58680882 58680920 -61603392 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1032 580 285 92 81 chr13 58681142 58681489 -61602823 + MLT1A LTR MaLR 24 374 0 3 1032 1134 89 0 7 chr13 58681583 58681730 -61602582 - B1_Mm SINE Alu 0 147 2 4 1032 873 228 48 10 chr13 58682845 58683053 -61601259 + B3 SINE B2 1 216 0 4 1032 365 260 38 48 chr13 58683227 58683332 -61600980 + PB1D7 SINE Alu 3 106 -14 4 1032 448 309 6 18 chr13 58683445 58683610 -61600702 - RSINE1 SINE B4 0 165 3 4 1032 250 29 0 0 chr13 58685167 58685201 -61599111 - B3A SINE B2 -164 34 1 4 1032 3498 28 2 0 chr13 58685234 58685629 -61598683 - MTA_Mm LTR MaLR 0 396 1 4 1032 9300 33 4 1 chr13 58685629 58686724 -61597588 - MTA_Mm-int LTR MaLR 0 1098 1 4 1032 3554 20 2 0 chr13 58686724 58687119 -61597193 - MTA_Mm LTR MaLR 0 396 1 4 1032 1442 193 202 97 chr13 58687530 58688005 -61596307 + MT2A LTR ERVL 1 525 -8 4 1032 339 85 0 0 chr13 58688016 58688063 -61596249 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1032 1222 48 0 0 chr13 58688063 58688209 -61596103 - B1_Mus2 SINE Alu 0 147 2 4 1032 605 304 78 34 chr13 58688251 58688633 -61595679 - L1MC1 LINE L1 -264 6069 5671 4 1032 612 271 0 21 chr13 58688973 58689116 -61595196 + ID_B1 SINE B4 84 223 -1 4 1032 485 211 8 0 chr13 58690342 58690465 -61593847 + CT-rich Low_complexity Low_complexity 1 124 0 4 1032 462 200 27 54 chr13 58690498 58690609 -61593703 - PB1D9 SINE Alu -1 119 12 4 1032 380 221 0 95 chr13 58691714 58691809 -61592503 + MT2B LTR ERVL 172 257 -344 4 1032 934 57 24 0 chr13 58691727 58691851 -61592461 + B1_Mus2 SINE Alu 21 147 0 4 1032 891 153 22 0 chr13 58691963 58692100 -61592212 + B1_Mur3 SINE Alu 3 142 -7 4 1032 476 200 304 18 chr13 58692112 58692280 -61592032 - B3 SINE B2 0 216 1 4 1032 438 183 14 0 chr13 58692821 58692892 -61591420 + B3 SINE B2 1 72 -144 4 1032 712 252 152 30 chr13 58692866 58693136 -61591176 + RMER5 LTR ERV1 221 523 -11 4 1032 664 286 147 57 chr13 58693271 58693559 -61590753 + MTE2b LTR MaLR 16 338 -41 4 1032 207 0 0 0 chr13 58693559 58693582 -61590730 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1032 664 286 147 57 chr13 58693582 58693597 -61590715 + MTE2b LTR MaLR 339 350 -29 4 1032 1209 55 0 0 chr13 58693597 58693742 -61590570 + B1_Mus1 SINE Alu 2 146 -2 4 1032 664 286 147 57 chr13 58693742 58693771 -61590541 + MTE2b LTR MaLR 351 377 -2 4 1032 197 77 0 49 chr13 58693771 58693812 -61590500 + (CAAA)n Simple_repeat Simple_repeat 3 41 0 4 1032 24 0 0 0 chr13 58693814 58693838 -61590474 + AT_rich Low_complexity Low_complexity 1 24 0 4 1032 1199 116 0 0 chr13 58693838 58694002 -61590310 - B2_Mm2 SINE B2 -31 164 1 4 1032 573 176 122 32 chr13 58694003 58694014 -61590298 - B1_Mus2 SINE Alu -4 143 136 4 1032 338 0 24 0 chr13 58694014 58694056 -61590256 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 4 1032 573 176 122 32 chr13 58694056 58694167 -61590145 - B1_Mus2 SINE Alu -12 135 10 4 1032 384 292 169 6 chr13 58694700 58694872 -61589440 + MER67A LTR ERV1 241 440 -103 4 1032 903 109 0 0 chr13 58695058 58695196 -61589116 + (TTTC)n Simple_repeat Simple_repeat 1 138 0 4 1032 213 39 0 0 chr13 58695215 58695241 -61589071 + (TCCC)n Simple_repeat Simple_repeat 4 29 0 4 1032 1159 62 0 7 chr13 58695432 58695578 -61588734 - B1_Mus2 SINE Alu -1 146 2 4 1032 686 268 93 16 chr13 58696102 58696295 -61588017 + B3 SINE B2 9 216 0 4 1032 576 228 114 0 chr13 58696569 58696683 -61587629 + B1_Mus2 SINE Alu 2 128 -19 4 1032 317 75 88 0 chr13 58696683 58696763 -61587549 + (CCAA)n Simple_repeat Simple_repeat 2 88 0 4 1032 740 223 60 30 chr13 58696789 58696988 -61587324 + B3 SINE B2 9 213 -3 4 1032 607 261 67 0 chr13 58696997 58697131 -61587181 + B1_Mur1 SINE Alu 1 143 -6 4 1032 23 0 0 0 chr13 58697131 58697154 -61587158 + AT_rich Low_complexity Low_complexity 1 23 0 4 1032 2156 162 99 3 chr13 58697177 58697561 -61586751 - MTC LTR MaLR 0 421 1 4 1032 415 254 107 78 chr13 58698079 58698284 -61586028 + MLT1A1 LTR MaLR 1 211 -197 4 1032 1229 245 158 3 chr13 58698265 58698613 -61585699 - MTD LTR MaLR -17 402 1 4 1032 313 154 27 180 chr13 58698674 58698785 -61585527 + MLT1A1 LTR MaLR 309 402 -6 4 1032 359 253 13 0 chr13 58699360 58699439 -61584873 - ID2 SINE ID 0 83 4 4 1032 914 172 0 11 chr13 58699731 58699913 -61584399 + CT-rich Low_complexity Low_complexity 1 180 0 4 1032 198 0 0 0 chr13 58699913 58699935 -61584377 + (TTTC)n Simple_repeat Simple_repeat 1 22 0 4 1032 221 289 22 88 chr13 58700396 58700487 -61583825 - PB1 SINE Alu -32 95 11 4 1032 1330 105 16 5 chr13 58700544 58700735 -61583577 + B2_Mm2 SINE B2 1 193 -2 4 1032 351 221 5 22 chr13 58700850 58700947 -61583365 + B1_Mur1 SINE Alu 5 128 -21 4 1032 243 0 0 0 chr13 58700958 58700985 -61583327 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 4 1032 244 176 196 0 chr13 58701284 58701335 -61582977 + MTA_Mm LTR MaLR 18 78 -318 4 1032 329 300 44 0 chr13 58701316 58701406 -61582906 - MTD LTR MaLR -293 126 33 4 1032 25 51 0 0 chr13 58701852 58701891 -61582421 + AT_rich Low_complexity Low_complexity 1 39 0 4 1032 1106 179 24 19 chr13 58701894 58702099 -61582213 - B3 SINE B2 -9 207 2 4 1032 812 167 0 16 chr13 58702311 58702494 -61581818 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1032 550 184 32 194 chr13 58703106 58703261 -61581051 + B1_Mus2 SINE Alu 1 130 -17 4 1032 1293 86 0 41 chr13 58703877 58704037 -61580275 + B2_Mm2 SINE B2 1 159 -36 4 1032 246 32 0 0 chr13 58704037 58704068 -61580244 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 4 1032 1293 86 0 41 chr13 58704068 58704102 -61580210 + B2_Mm2 SINE B2 160 187 -8 4 1032 190 278 33 35 chr13 58704199 58704301 -61580011 + L2a LINE L2 3280 3418 -8 4 1032 262 260 135 0 chr13 58704371 58704445 -61579867 + B3A SINE B2 2 89 -109 4 1032 263 297 0 13 chr13 58704445 58704520 -61579792 + RLTR24 LTR ERV1 2 75 -454 4 1032 1168 82 0 0 chr13 58704740 58704887 -61579425 + B1_Mus2 SINE Alu 1 147 0 4 1032 306 0 0 0 chr13 58704887 58704921 -61579391 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1032 536 0 16 0 chr13 58705134 58705198 -61579114 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 1032 295 276 34 49 chr13 58705388 58705491 -61578821 + PB1D9 SINE Alu 21 120 0 4 1032 514 309 52 9 chr13 58705493 58705725 -61578587 + L1M4 LINE L1 979 1220 -5322 4 1032 812 246 24 28 chr13 58705773 58705986 -61578326 + ID_B1 SINE B4 7 218 -6 4 1032 551 282 30 0 chr13 58706021 58706152 -61578160 + B1_Mur1 SINE Alu 2 136 -13 4 1032 2209 168 16 38 chr13 58706155 58706581 -61577731 + MTC LTR MaLR 5 421 0 4 1032 233 278 83 9 chr13 58706587 58706696 -61577616 + L1M4 LINE L1 3434 3550 -3094 4 1032 859 188 148 6 chr13 58706697 58706879 -61577433 + B3 SINE B2 2 209 -7 4 1032 279 0 0 0 chr13 58707480 58707511 -61576801 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1032 423 163 26 80 chr13 58707548 58707661 -61576651 + B1_Mus2 SINE Alu 40 146 -1 4 1032 254 68 0 43 chr13 58707662 58707708 -61576604 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 4 1032 254 299 0 0 chr13 58708122 58708189 -61576123 - ID4 SINE ID -1 82 16 4 1032 433 229 74 9 chr13 58708155 58708290 -61576022 - B1F1 SINE Alu -2 147 1 4 1032 410 239 123 41 chr13 58708325 58708447 -61575865 - RSINE1 SINE B4 -32 133 2 4 1032 297 281 86 40 chr13 58708697 58708849 -61575463 + L1M4 LINE L1 5947 6105 -633 4 1032 453 244 265 12 chr13 58708856 58709018 -61575294 + ID_B1 SINE B4 22 224 0 4 1032 657 287 129 97 chr13 58710852 58711349 -61572963 + MER34A LTR ERV1 1 513 -58 4 1032 712 115 0 16 chr13 58712775 58712899 -61571413 + (TCC)n Simple_repeat Simple_repeat 3 124 0 4 1032 313 330 77 17 chr13 58713165 58713282 -61571030 + Cheshire DNA MER1_type 6 129 -2291 4 1032 388 257 64 9 chr13 58713546 58713656 -61570656 + B1F2 SINE Alu 34 149 0 4 1032 240 265 255 0 chr13 58713671 58713769 -61570543 + RSINE1 SINE B4 43 165 0 4 1032 270 312 61 20 chr13 58713794 58713892 -61570420 + Cheshire DNA MER1_type 156 257 -2163 4 1032 1018 121 74 11 chr13 58714097 58714272 -61570040 + B2_Mm2 SINE B2 1 186 -9 4 1032 210 37 0 0 chr13 58714815 58714842 -61569470 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1032 713 145 72 8 chr13 58714842 58714967 -61569345 - B1_Mus2 SINE Alu -11 136 4 4 1032 347 254 33 80 chr13 58714967 58715016 -61569296 - MT2B LTR ERVL -438 163 122 4 1032 1014 122 0 7 chr13 58715221 58715369 -61568943 - B1_Mus1 SINE Alu 0 148 2 4 1032 242 309 0 14 chr13 58715572 58715641 -61568671 + ID_B1 SINE B4 83 150 -74 4 1032 225 0 0 0 chr13 58715665 58715690 -61568622 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 4 1032 932 90 97 0 chr13 58715763 58715897 -61568415 + B1_Mus2 SINE Alu 1 147 0 4 1032 204 279 58 31 chr13 58716620 58716725 -61567587 + L2a LINE L2 3255 3399 -27 4 1032 1230 34 14 0 chr13 58716862 58717008 -61567304 + B1_Mus1 SINE Alu 1 148 0 4 1032 297 0 0 0 chr13 58717008 58717041 -61567271 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1032 688 259 0 0 chr13 58717058 58717197 -61567115 - B1F1 SINE Alu -10 139 1 4 1032 625 204 0 110 chr13 58717238 58717392 -61566920 - B1_Mur1 SINE Alu 0 149 13 4 1032 302 0 26 0 chr13 58717600 58717638 -61566674 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1032 183 204 0 0 chr13 58718381 58718425 -61565887 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1032 325 208 0 65 chr13 58718464 58718541 -61565771 - B4A SINE B4 -4 288 217 4 1032 25 0 0 0 chr13 58718541 58718566 -61565746 + AT_rich Low_complexity Low_complexity 1 25 0 4 1032 377 123 0 2 chr13 58718578 58718642 -61565670 - B2_Mm2 SINE B2 -107 109 47 4 1032 1026 237 78 26 chr13 58718636 58718653 -61565659 - B4A SINE B4 -50 242 231 4 1032 1214 94 53 0 chr13 58718653 58718824 -61565488 - B2_Mm1t SINE B2 -12 181 2 4 1032 1026 237 78 26 chr13 58718824 58719036 -61565276 - B4A SINE B4 -62 230 1 4 1032 386 321 73 0 chr13 58719076 58719213 -61565099 - B1F SINE Alu -2 147 1 4 1032 506 306 107 32 chr13 58719357 58719856 -61564456 + L1MC4 LINE L1 7172 7689 -193 4 1 430 202 147 17 chr13 58720242 58720358 -61563954 + B1F2 SINE Alu 19 149 0 5 1033 216 0 0 0 chr13 58720460 58720484 -61563828 + (CAAAA)n Simple_repeat Simple_repeat 4 27 0 5 1033 576 181 0 0 chr13 58721522 58721649 -61562663 + (TG)n Simple_repeat Simple_repeat 2 128 0 5 1033 290 296 12 0 chr13 58721653 58721734 -61562578 - B1F2 SINE Alu -63 86 5 5 1033 288 261 0 80 chr13 58722141 58722241 -61562071 + ID_B1 SINE B4 102 193 -31 5 1033 3286 60 2 2 chr13 58722447 58722850 -61561462 + MTB_Mm LTR MaLR 1 403 -4 5 1033 1576 148 120 9 chr13 58722863 58723276 -61561036 - RMER17C LTR ERVK -519 439 16 5 1033 193 273 47 147 chr13 58723637 58723766 -61560546 + L2c LINE L2 3254 3369 -18 5 1033 371 256 108 31 chr13 58725014 58725143 -61559169 - B4 SINE B4 -52 240 102 5 1033 1148 82 0 0 chr13 58725713 58725860 -61558452 + B1_Mus2 SINE Alu 1 147 0 5 1033 2509 108 18 50 chr13 58725948 58726346 -61557966 - RLTR9D LTR ERVK -18 385 1 5 1033 714 223 0 0 chr13 58726557 58726853 -61557459 + (CA)n Simple_repeat Simple_repeat 1 296 0 5 1033 602 179 23 23 chr13 58726860 58727037 -61557275 + (CATA)n Simple_repeat Simple_repeat 4 180 0 5 1033 619 254 14 7 chr13 58727072 58727211 -61557101 + B1F2 SINE Alu 2 141 -8 5 1033 245 312 60 43 chr13 58727569 58727686 -61556626 - Charlie4a DNA MER1_type -184 324 206 5 1033 1195 239 35 52 chr13 58727689 58728064 -61556248 + RLTR19 LTR ERVK 143 495 -4 5 1033 24 67 0 0 chr13 58728076 58728121 -61556191 + AT_rich Low_complexity Low_complexity 1 45 0 5 1033 650 258 38 25 chr13 58728133 58728292 -61556020 - B3 SINE B2 -41 175 15 5 1033 288 322 17 25 chr13 58728295 58728413 -61555899 - PB1D10 SINE Alu 0 117 1 5 1033 228 317 47 28 chr13 58728413 58728441 -61555871 - B4A SINE B4 -204 88 59 5 1033 281 163 32 11 chr13 58728594 58728687 -61555625 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 1033 587 166 7 33 chr13 58728749 58729029 -61555283 + (TG)n Simple_repeat Simple_repeat 1 272 0 5 1033 185 256 26 0 chr13 58729681 58729720 -61554592 + MIR SINE MIR 106 145 -63 5 1033 1292 152 19 14 chr13 58729791 58730004 -61554308 + B3 SINE B2 2 215 -1 5 1033 285 279 43 51 chr13 58730261 58730378 -61553934 + MIR3 SINE MIR 57 172 -36 5 1033 1822 169 34 23 chr13 58730982 58731333 -61552979 - MTC LTR MaLR 0 421 67 5 1033 371 219 135 38 chr13 58731391 58731524 -61552788 - RSINE1 SINE B4 -7 158 13 5 1033 334 298 42 11 chr13 58731502 58731597 -61552715 + MER2 DNA MER2_type 167 264 -81 5 1033 296 277 97 114 chr13 58731932 58732046 -61552266 + PB1 SINE Alu 13 124 -3 5 1033 464 158 520 0 chr13 58732286 58732428 -61551884 + MTC LTR MaLR 3 218 -203 5 1033 471 211 54 101 chr13 58732586 58732734 -61551578 + B1F2 SINE Alu 9 149 0 5 1033 436 216 43 55 chr13 58733359 58733492 -61550820 - B1F2 SINE Alu -10 139 14 5 1033 299 287 78 26 chr13 58733645 58733799 -61550513 + MER106A DNA MER1_type 59 220 -16 5 1033 198 0 0 0 chr13 58733860 58733882 -61550430 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1033 1297 20 0 0 chr13 58733887 58734034 -61550278 - B1_Mm SINE Alu 0 147 1 5 1033 408 20 0 0 chr13 58734500 58734549 -61549763 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1033 495 232 58 0 chr13 58735679 58735834 -61548478 - Lx9 LINE L1 0 7644 7481 5 1033 1346 75 26 31 chr13 58735849 58736043 -61548269 - B2_Mm2 SINE B2 -1 194 2 5 1033 318 106 0 0 chr13 58736821 58736868 -61547444 + (TATG)n Simple_repeat Simple_repeat 2 48 0 5 1033 919 110 29 6 chr13 58736882 58737056 -61547256 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 5 1033 663 71 0 0 chr13 58737078 58737176 -61547136 + (TCTA)n Simple_repeat Simple_repeat 3 100 0 5 1033 227 242 48 0 chr13 58738226 58738288 -61546024 + CT-rich Low_complexity Low_complexity 1 65 0 5 1033 539 272 132 11 chr13 58738322 58738504 -61545808 - B4A SINE B4 -5 287 84 5 1033 213 121 0 0 chr13 58738504 58738537 -61545775 + (CAAAA)n Simple_repeat Simple_repeat 5 37 0 5 1033 1038 72 58 0 chr13 58738676 58738815 -61545497 - B1_Mm SINE Alu 0 147 1 5 1033 226 255 290 9 chr13 58739304 58739363 -61544949 + Charlie12 DNA MER1_type 39 101 -2772 5 1033 342 0 0 0 chr13 58739363 58739401 -61544911 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 5 1033 226 255 290 9 chr13 58739401 58739448 -61544864 + Charlie12 DNA MER1_type 102 174 -2699 5 1033 513 242 0 24 chr13 58739488 58739611 -61544701 + PB1D9 SINE Alu 1 120 0 5 1033 206 211 0 34 chr13 58739615 58739674 -61544638 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1033 516 72 0 0 chr13 58739755 58739824 -61544488 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 5 1033 570 258 8 0 chr13 58740624 58740752 -61543560 + RSINE1 SINE B4 36 164 -1 5 1033 644 200 141 45 chr13 58740832 58741027 -61543285 - B3 SINE B2 0 216 7 5 1033 647 135 0 0 chr13 58741197 58741293 -61543019 + B2_Mm2 SINE B2 1 96 -99 5 1033 626 37 12 0 chr13 58741409 58741490 -61542822 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 5 1033 1185 114 0 6 chr13 58741491 58741659 -61542653 - B2_Mm2 SINE B2 -27 168 2 5 1033 342 0 0 0 chr13 58741795 58741833 -61542479 + (GA)n Simple_repeat Simple_repeat 1 38 0 5 1033 185 62 0 77 chr13 58742125 58742177 -61542135 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1033 441 0 0 0 chr13 58742202 58742251 -61542061 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1033 310 286 10 20 chr13 58742308 58742408 -61541904 - RSINE1 SINE B4 -64 101 3 5 1033 1094 235 31 54 chr13 58744401 58744752 -61539560 + RLTR15 LTR ERVK 1 343 -16 5 1033 491 142 6 57 chr13 58745380 58745537 -61538775 + CT-rich Low_complexity Low_complexity 2 150 0 5 1033 198 0 0 0 chr13 58748042 58748064 -61536248 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 5 1033 1486 65 0 5 chr13 58748071 58748257 -61536055 - B2_Mm2 SINE B2 -9 186 2 5 1033 632 129 56 8 chr13 58748262 58748387 -61535925 - Lx9 LINE L1 -1 7643 7513 5 1033 516 32 0 0 chr13 58748388 58748450 -61535862 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1033 1519 225 119 7 chr13 58748454 58748865 -61535447 - Lx9 LINE L1 -179 7465 7009 5 1033 339 318 224 0 chr13 58749627 58749734 -61534578 - MER58A DNA MER1_type -93 131 1 5 1033 337 311 60 40 chr13 58749968 58750169 -61534143 - HAL1b LINE L1 -251 1758 1554 5 1033 694 222 7 15 chr13 58750402 58750539 -61533773 - MTEa LTR MaLR -241 138 3 5 1033 517 203 109 29 chr13 58750580 58750717 -61533595 - B1F SINE Alu -1 148 1 5 1033 411 21 0 0 chr13 58750725 58750773 -61533539 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1033 683 241 56 0 chr13 58750779 58750941 -61533371 - B3A SINE B2 -26 172 2 5 1033 812 239 86 34 chr13 58750944 58751178 -61533134 - MTEa-int LTR MaLR -27 1553 1308 5 1033 891 35 34 25 chr13 58751173 58751292 -61533020 + B1_Mus2 SINE Alu 28 147 0 5 1033 288 264 130 11 chr13 58751338 58751430 -61532882 - MTEa-int LTR MaLR -287 1293 1191 5 1033 391 263 117 17 chr13 58751450 58751570 -61532742 - MTEa-int LTR MaLR -1448 132 1 5 1033 870 297 130 24 chr13 58751582 58751913 -61532399 - MTEa LTR MaLR -13 366 1 5 1033 22 70 0 0 chr13 58751938 58751981 -61532331 + AT_rich Low_complexity Low_complexity 1 43 0 5 1033 347 174 9 0 chr13 58751988 58752052 -61532260 - B2_Mm2 SINE B2 -102 114 47 5 1033 1449 65 0 21 chr13 58752094 58752283 -61532029 - B2_Mm2 SINE B2 -7 188 4 5 1033 381 22 0 0 chr13 58752307 58752353 -61531959 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1033 851 169 0 34 chr13 58752623 58752770 -61531542 - B1_Mus1 SINE Alu 0 148 7 5 1033 305 345 99 10 chr13 58752969 58753171 -61531141 - HAL1b LINE L1 -765 1244 1025 5 1033 427 186 10 10 chr13 58754749 58754852 -61529460 + CT-rich Low_complexity Low_complexity 1 103 0 5 1033 201 392 0 34 chr13 58754852 58755029 -61529283 + C-rich Low_complexity Low_complexity 4 174 0 5 1033 513 268 107 21 chr13 58756460 58756647 -61527665 + Tigger7 DNA MER2_type 2284 2486 -5 5 1033 437 191 60 0 chr13 58756649 58756733 -61527579 - MLT2C1 LTR ERVL -155 242 154 5 1033 814 173 72 11 chr13 58756990 58757171 -61527141 + B3 SINE B2 1 192 -24 5 1033 215 323 21 31 chr13 58758904 58759000 -61525312 + (CATG)n Simple_repeat Simple_repeat 1 95 0 5 1033 219 302 0 0 chr13 58758928 58758981 -61525331 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1033 450 172 0 0 chr13 58759000 58759099 -61525213 + (CA)n Simple_repeat Simple_repeat 1 99 0 5 1033 286 326 30 79 chr13 58759287 58759490 -61524822 + L4 LINE RTE 1737 1929 -100 5 1033 541 291 40 11 chr13 58759637 58759811 -61524501 + B3A SINE B2 10 188 -10 5 1033 533 200 85 0 chr13 58760008 58760138 -61524174 + ORR1D2 LTR MaLR 1 141 -229 5 1033 476 101 11 0 chr13 58760196 58760285 -61524027 + (TC)n Simple_repeat Simple_repeat 2 91 0 5 1033 374 207 45 41 chr13 58760285 58760527 -61523785 + RMER17D LTR ERVK 269 511 -378 5 1033 400 236 53 11 chr13 58760469 58760563 -61523749 + ORR1D2 LTR MaLR 262 359 0 5 1033 1622 48 0 10 chr13 58760644 58760853 -61523459 + L1Md_F2 LINE L1 6374 6580 -2 5 1033 346 218 0 0 chr13 58760904 58760959 -61523353 + B1_Mur4 SINE Alu 2 56 -94 5 1033 470 313 30 0 chr13 58761161 58761292 -61523020 + B1F SINE Alu 1 135 -14 5 1033 673 192 0 16 chr13 58763124 58763246 -61521066 + PB1D9 SINE Alu 1 120 0 5 1033 423 0 0 0 chr13 58764016 58764063 -61520249 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 5 1033 569 341 89 53 chr13 58764311 58764649 -61519663 - MLT1A0 LTR MaLR -15 350 1 5 1033 273 264 0 89 chr13 58765515 58765594 -61518718 + ID4_ SINE ID 3 74 -9 5 1033 253 291 108 31 chr13 58765731 58765838 -61518474 + MER5C DNA MER1_type 104 218 -95 5 1033 324 48 0 0 chr13 58765838 58765880 -61518432 + (TATG)n Simple_repeat Simple_repeat 4 45 0 5 1033 253 291 108 31 chr13 58765880 58765967 -61518345 + MER5C DNA MER1_type 219 313 0 5 1033 1678 229 70 93 chr13 58766078 58766594 -61517718 - RLTR18B LTR ERVK -8 504 1 5 1033 482 229 6 0 chr13 58767483 58767662 -61516650 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1033 614 183 0 22 chr13 58767686 58767870 -61516442 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1033 501 312 32 19 chr13 58767879 58768036 -61516276 - RSINE1 SINE B4 -4 161 3 5 1033 27 0 0 0 chr13 58768055 58768082 -61516230 + AT_rich Low_complexity Low_complexity 1 27 0 6 1033 345 238 39 39 chr13 58768083 58768210 -61516102 - Lx8 LINE L1 -3 7470 7344 6 1033 528 232 29 101 chr13 58768745 58768884 -61515428 + RSINE1 SINE B4 13 141 -24 6 1033 299 65 0 21 chr13 58768901 58768948 -61515364 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 6 1033 23 0 0 0 chr13 58771484 58771507 -61512805 + AT_rich Low_complexity Low_complexity 1 23 0 6 1033 657 224 66 111 chr13 58772584 58772810 -61511502 - B3A SINE B2 0 216 1 6 1033 419 282 72 172 chr13 58773141 58773163 -61511149 + MTD LTR MaLR 21 41 -338 6 1033 414 0 0 0 chr13 58773163 58773209 -61511103 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 6 1033 934 239 42 153 chr13 58773209 58773259 -61511053 + MTD LTR MaLR 42 126 -293 6 1033 1633 135 212 3 chr13 58773259 58773585 -61510727 + ORR1B1 LTR MaLR 1 394 0 6 1033 934 228 34 148 chr13 58773585 58773678 -61510634 + MTD LTR MaLR 127 203 -216 6 1033 761 212 40 60 chr13 58773678 58773879 -61510433 + B3A SINE B2 2 198 0 6 1033 934 236 40 152 chr13 58773879 58774084 -61510228 + MTD LTR MaLR 177 357 -62 6 1033 2757 286 84 37 chr13 58774084 58775082 -61509230 + MTD-int LTR MaLR 1 1045 -213 6 1033 537 58 0 0 chr13 58775113 58775182 -61509130 - RLTR44D LTR ERVK -417 69 1 6 1033 267 203 17 0 chr13 58775218 58775277 -61509035 + MTD-int LTR MaLR 1193 1252 -6 6 1033 1100 284 88 38 chr13 58775284 58775503 -61508809 + MTD LTR MaLR 1 210 -209 6 1033 1036 197 19 19 chr13 58775503 58775715 -61508597 + B3 SINE B2 1 212 -4 6 1033 1100 284 88 38 chr13 58775715 58775894 -61508418 + MTD LTR MaLR 211 419 0 6 1033 276 130 0 0 chr13 58776324 58776370 -61507942 + (TTA)n Simple_repeat Simple_repeat 1 46 0 6 1033 893 177 7 7 chr13 58776434 58776582 -61507730 - B1_Mur4 SINE Alu 0 150 3 6 1033 327 193 185 85 chr13 58776733 58776863 -61507449 - B3A SINE B2 -5 193 51 6 1033 2135 93 14 152 chr13 58777035 58777463 -61506849 + ORR1A1 LTR MaLR 1 338 -8 6 1033 588 118 22 45 chr13 58779544 58779722 -61504590 + (TCTCTG)n Simple_repeat Simple_repeat 2 175 0 6 1033 866 161 7 7 chr13 58779866 58780004 -61504308 - B1_Mur3 SINE Alu -7 142 5 6 1033 816 279 83 16 chr13 58780107 58780420 -61503892 + L1M2 LINE L1 4455 4788 -1355 6 1033 375 333 21 7 chr13 58780730 58780875 -61503437 + MLT1I LTR MaLR 73 219 -192 6 1033 186 279 88 12 chr13 58781095 58781175 -61503137 - MIR SINE MIR -131 131 46 6 1033 205 75 24 48 chr13 58782215 58782257 -61502055 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 6 1033 636 70 0 0 chr13 58782749 58782835 -61501477 + (TG)n Simple_repeat Simple_repeat 2 87 0 6 1033 331 228 51 0 chr13 58782961 58783040 -61501272 + MTE2a LTR MaLR 5 87 -292 6 1033 319 278 21 0 chr13 58783119 58783216 -61501096 - MER46C DNA MER2_type -106 232 134 6 1033 855 164 0 0 chr13 58783248 58783548 -61500764 + (TG)n Simple_repeat Simple_repeat 1 300 0 6 1033 735 217 96 45 chr13 58784562 58784717 -61499595 + B3 SINE B2 5 159 -57 6 1033 507 33 0 0 chr13 58784717 58784778 -61499534 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1033 735 217 96 45 chr13 58784778 58784820 -61499492 + B3 SINE B2 160 211 -5 6 1033 1129 88 0 7 chr13 58784838 58784987 -61499325 + B1_Mus1 SINE Alu 1 148 0 6 1033 307 79 31 16 chr13 58784987 58785051 -61499261 + (CAAAAA)n Simple_repeat Simple_repeat 1 65 0 6 1033 2690 114 63 0 chr13 58785981 58786394 -61497918 - BGLII_B LTR ERVK -2 439 1 6 1033 440 255 173 6 chr13 58786593 58786755 -61497557 - B3 SINE B2 0 216 28 6 1033 702 208 172 0 chr13 58787475 58787667 -61496645 - URR1B DNA MER1_type 0 225 1 6 1033 228 349 0 19 chr13 58788316 58788424 -61495888 + C-rich Low_complexity Low_complexity 5 110 0 6 1033 1946 239 42 16 chr13 58788438 58788872 -61495440 + Lx8 LINE L1 6823 7267 -206 6 1033 789 239 76 5 chr13 58788881 58789079 -61495233 - Lx8 LINE L1 -955 6518 6307 6 1033 234 241 193 55 chr13 58789117 58789262 -61495050 + Lx8 LINE L1 7302 7466 -7 6 1033 710 78 0 10 chr13 58789380 58789483 -61494829 + (TCCC)n Simple_repeat Simple_repeat 2 103 0 6 1033 287 316 0 0 chr13 58790116 58790192 -61494120 + C-rich Low_complexity Low_complexity 1 76 0 6 1033 288 255 32 0 chr13 58790248 58790342 -61493970 - PB1D9 SINE Alu -23 97 1 6 1033 935 218 140 18 chr13 58791387 58791748 -61492564 + MT2A LTR ERVL 1 523 -61 6 1033 582 128 0 0 chr13 58791748 58791842 -61492470 + (CA)n Simple_repeat Simple_repeat 1 94 0 6 1033 675 239 114 46 chr13 58791842 58791880 -61492432 + MT2A LTR ERVL 524 580 -4 6 1033 1021 43 0 14 chr13 58792044 58792184 -61492128 - B1_Mus2 SINE Alu -1 146 9 6 1033 424 193 32 95 chr13 58792080 58792206 -61492106 - MT2B LTR ERVL -337 264 147 6 1033 337 320 42 28 chr13 58793399 58793614 -61490698 - RMER15 LTR ERVL -18 557 340 6 1033 261 185 43 58 chr13 58793848 58793917 -61490395 - Lx8 LINE L1 -357 7116 7049 6 1033 557 252 8 0 chr13 58794581 58794704 -61489608 + RSINE1 SINE B4 4 127 -38 6 1033 476 345 6 6 chr13 58796462 58796634 -61487678 + MER5B DNA MER1_type 1 172 -6 6 1033 1325 111 21 0 chr13 58797244 58797434 -61486878 + B2_Mm2 SINE B2 2 195 0 6 1033 311 310 71 12 chr13 58798175 58798345 -61485967 + MLT1D LTR MaLR 239 418 -87 6 1033 535 284 39 0 chr13 58798410 58798565 -61485747 - MLT1I LTR MaLR -6 405 245 6 1033 450 0 0 0 chr13 58798966 58799016 -61485296 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 6 1033 1220 178 166 31 chr13 58799018 58799343 -61484969 + MTD LTR MaLR 23 391 -28 6 1033 1179 43 0 0 chr13 58799810 58799949 -61484363 - B1_Mus2 SINE Alu -8 139 1 6 1033 358 269 119 6 chr13 58801146 58801322 -61482990 + L1MA6 LINE L1 6099 6294 -6 6 1033 204 40 0 0 chr13 58801763 58801788 -61482524 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1033 782 203 102 25 chr13 58801868 58802065 -61482247 - B3 SINE B2 -3 213 2 6 1033 1480 33 27 16 chr13 58802357 58802543 -61481769 + B2_Mm2 SINE B2 2 189 -6 6 1033 231 303 46 0 chr13 58802661 58802770 -61481542 - MER2 DNA MER2_type -104 241 128 6 1033 356 279 0 0 chr13 58802792 58802883 -61481429 - BC1_Mm scRNA scRNA -58 94 4 6 1033 474 285 22 30 chr13 58802936 58803070 -61481242 + B3 SINE B2 80 212 -4 6 1033 242 248 62 55 chr13 58803617 58803745 -61480567 - MER44A DNA MER2_type -122 217 89 6 1033 736 207 0 6 chr13 58803940 58804266 -61480046 + (TG)n Simple_repeat Simple_repeat 1 324 0 6 1033 764 272 0 0 chr13 58804339 58804519 -61479793 - B3A SINE B2 -17 181 2 6 1033 265 281 250 28 chr13 58806651 58806827 -61477485 + MER2 DNA MER2_type 9 223 -122 6 1033 1568 127 55 70 chr13 58806943 58807331 -61476981 + RMER17C LTR ERVK 1 384 -26 6 1033 1565 42 5 10 chr13 58807331 58807524 -61476788 - B2_Mm1a SINE B2 0 193 2 6 1033 1568 127 55 70 chr13 58807524 58807551 -61476761 + RMER17C LTR ERVK 385 410 0 6 1033 1441 215 92 5 chr13 58808372 58808751 -61475561 + MTD LTR MaLR 8 419 0 6 1033 247 207 17 0 chr13 58808850 58808908 -61475404 + L1_Mur3 LINE L1 2297 2355 -3525 6 1033 287 266 0 2 chr13 58809340 58809421 -61474891 - B4A SINE B4 -212 80 1 6 1033 33 43 0 0 chr13 58809619 58809666 -61474646 + AT_rich Low_complexity Low_complexity 1 47 0 6 1033 1536 193 122 12 chr13 58810712 58811048 -61473264 + ORR1D1 LTR MaLR 2 374 0 6 1033 228 128 26 0 chr13 58811056 58811095 -61473217 - MIRc SINE MIR -135 133 94 6 1033 252 58 37 37 chr13 58811194 58811239 -61473073 + (GAA)n Simple_repeat Simple_repeat 1 44 0 6 1033 1308 79 0 0 chr13 58811239 58811417 -61472895 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 6 1033 252 58 37 37 chr13 58811417 58811425 -61472887 + (GAA)n Simple_repeat Simple_repeat 3 11 0 6 1033 1746 139 22 78 chr13 58811475 58811833 -61472479 + ORR1C2 LTR MaLR 3 340 -44 6 1033 1568 221 8 45 chr13 58811818 58812193 -61472119 - ORR1D1 LTR MaLR -13 361 1 6 1033 305 268 61 35 chr13 58813616 58813813 -61470499 + MusHAL1 LINE L1 251 452 -2260 6 1033 593 164 169 6 chr13 58813845 58814011 -61470301 + MTD LTR MaLR 213 405 -14 6 1033 2471 180 170 15 chr13 58814040 58814569 -61469743 - RMER19C LTR ERVK 0 611 1 6 1033 3109 66 8 10 chr13 58815245 58815645 -61468667 + MTB LTR MaLR 1 399 -1 6 1033 306 256 35 11 chr13 58816076 58816163 -61468149 + Charlie20a DNA Charlie 158 246 -561 6 1033 325 320 9 37 chr13 58816518 58816625 -61467687 - MER63C DNA AcHobo -545 385 282 6 1033 23 0 0 0 chr13 58816735 58816758 -61467554 + AT_rich Low_complexity Low_complexity 1 23 0 6 1033 516 176 36 88 chr13 58817374 58817511 -61466801 + B1_Mm SINE Alu 17 146 -1 6 1033 279 54 0 0 chr13 58817549 58817586 -61466726 + (T)n Simple_repeat Simple_repeat 1 37 0 6 1033 569 241 14 14 chr13 58818191 58818338 -61465974 - ORR1D2 LTR MaLR -223 147 1 6 1033 269 292 7 0 chr13 58818348 58818502 -61465810 + (CA)n Simple_repeat Simple_repeat 2 156 0 6 1033 236 114 23 0 chr13 58818775 58818819 -61465493 + MT2A LTR ERVL 485 529 -4 6 1033 339 267 0 0 chr13 58819586 58819661 -61464651 + ID4 SINE ID 1 75 -8 6 1033 410 272 0 6 chr13 58819671 58819845 -61464467 + (CA)n Simple_repeat Simple_repeat 2 174 0 6 1033 183 184 0 0 chr13 58819857 58819895 -61464417 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1033 898 201 53 19 chr13 58819912 58820120 -61464192 - B3 SINE B2 -1 215 1 6 1033 376 250 29 12 chr13 58821360 58821530 -61462782 + (TATATG)n Simple_repeat Simple_repeat 4 176 0 6 1033 815 286 18 53 chr13 58821541 58821825 -61462487 - B4A SINE B4 0 292 19 6 1033 198 0 0 0 chr13 58822583 58822605 -61461707 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1033 715 320 91 73 chr13 58822786 58823521 -61460791 + L1_Rod LINE L1 5085 5832 -15 6 1033 235 167 30 0 chr13 58823832 58823898 -61460414 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 1033 195 69 0 0 chr13 58824112 58824141 -61460171 + (T)n Simple_repeat Simple_repeat 1 29 0 6 1033 255 188 172 0 chr13 58825194 58825258 -61459054 - Lx7 LINE L1 -1782 5914 5840 6 1033 294 290 0 0 chr13 58825766 58825835 -61458477 + (TG)n Simple_repeat Simple_repeat 1 69 0 7 1033 360 59 0 0 chr13 58826842 58826893 -61457419 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1033 369 268 30 95 chr13 58827083 58827252 -61457060 - B3 SINE B2 -11 205 48 7 1033 297 0 0 0 chr13 58827263 58827296 -61457016 + (TCTG)n Simple_repeat Simple_repeat 4 36 0 7 1033 1146 87 0 0 chr13 58827303 58827464 -61456848 - B2_Mm2 SINE B2 -34 161 1 7 1033 417 236 47 9 chr13 58827794 58827901 -61456411 + PB1D10 SINE Alu 1 111 -6 7 1033 539 322 99 0 chr13 58829536 58829747 -61454565 + B4 SINE B4 2 233 -59 7 1033 1051 113 11 11 chr13 58829782 58829961 -61454351 + (CAGG)n Simple_repeat Simple_repeat 1 179 0 7 1033 195 129 0 0 chr13 58829962 58829993 -61454319 + (CAAG)n Simple_repeat Simple_repeat 1 31 0 7 1033 291 54 0 0 chr13 58830091 58830128 -61454184 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1033 379 273 39 69 chr13 58830358 58830488 -61453824 - B1F1 SINE Alu -6 143 18 7 1033 3442 30 5 0 chr13 58830492 58830885 -61453427 - MTA_Mm LTR MaLR -1 395 1 7 1033 1038 75 20 0 chr13 58832409 58832556 -61451756 + B2_Mm2 SINE B2 1 150 -45 7 1033 288 0 0 0 chr13 58832557 58832589 -61451723 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 7 1033 1152 76 0 0 chr13 58832615 58832760 -61451552 + B1_Mm SINE Alu 2 146 -1 7 1033 405 58 0 0 chr13 58832762 58832814 -61451498 + (GGAAA)n Simple_repeat Simple_repeat 3 54 0 7 1033 593 290 32 46 chr13 58833482 58833699 -61450613 + MIR SINE MIR 39 252 -10 7 1033 239 204 0 0 chr13 58833804 58833848 -61450464 + L2b LINE L2 3330 3373 -2 7 1033 250 353 75 47 chr13 58834378 58834485 -61449827 - LTR33A_ LTR ERVL -357 174 65 7 1033 312 317 9 88 chr13 58834623 58834737 -61449575 + Cheshire DNA MER1_type 169 273 -2147 7 1033 429 70 0 0 chr13 58835829 58835886 -61448426 + (TCC)n Simple_repeat Simple_repeat 1 57 0 7 1033 1029 237 56 42 chr13 58836131 58836417 -61447895 - B4A SINE B4 -2 290 1 7 1033 369 0 0 0 chr13 58836846 58836887 -61447425 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1033 384 103 0 0 chr13 58837607 58837665 -61446647 + (TATG)n Simple_repeat Simple_repeat 2 59 0 7 1033 21 57 0 0 chr13 58837680 58837715 -61446597 + AT_rich Low_complexity Low_complexity 1 35 0 7 1033 195 283 0 0 chr13 58837764 58837810 -61446502 - MIRb SINE MIR -12 256 211 7 1033 555 201 0 0 chr13 58837810 58837949 -61446363 + (CA)n Simple_repeat Simple_repeat 2 140 0 7 1033 1225 122 31 11 chr13 58838019 58838210 -61446102 + B2_Mm2 SINE B2 1 195 0 7 1033 1254 95 0 0 chr13 58838220 58838399 -61445913 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 7 1033 415 271 14 50 chr13 58839178 58839318 -61444994 + Lx8 LINE L1 6414 6548 -925 7 1033 389 279 78 14 chr13 58839394 58839536 -61444776 + Lx8 LINE L1 7020 7170 -303 7 1033 279 79 0 0 chr13 58839558 58839596 -61444716 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1033 1094 111 0 53 chr13 58839813 58839994 -61444318 + Lx3C LINE L1 6797 6967 -9 7 1033 180 77 0 0 chr13 58839994 58840020 -61444292 + (TAA)n Simple_repeat Simple_repeat 2 27 0 7 1033 280 51 0 63 chr13 58840155 58840218 -61444094 - B2_Mm2 SINE B2 0 195 137 7 1033 1146 148 17 0 chr13 58840299 58840475 -61443837 - B2_Mm1t SINE B2 -14 179 1 7 1033 29 0 0 0 chr13 58840477 58840506 -61443806 + AT_rich Low_complexity Low_complexity 1 29 0 7 1033 315 0 0 0 chr13 58840604 58840639 -61443673 + (T)n Simple_repeat Simple_repeat 1 35 0 7 1033 245 243 174 56 chr13 58840718 58840862 -61443450 - Lx8 LINE L1 0 7473 7313 7 1033 334 314 20 73 chr13 58841955 58842106 -61442206 + LTR33A_ LTR ERVL 367 509 -22 7 1033 641 101 10 0 chr13 58843211 58843310 -61441002 + (GA)n Simple_repeat Simple_repeat 1 100 0 7 1033 212 0 36 0 chr13 58844561 58844589 -61439723 + (TG)n Simple_repeat Simple_repeat 1 29 0 7 1033 297 0 0 0 chr13 58844589 58844622 -61439690 + (GA)n Simple_repeat Simple_repeat 2 34 0 7 1033 333 304 52 39 chr13 58844622 58844776 -61439536 + HAL1-3A_ME LINE L1 2284 2439 -419 7 1033 587 232 8 46 chr13 58844791 58844922 -61439390 - B1_Mur1 SINE Alu -23 126 1 7 1033 856 262 15 0 chr13 58844927 58845133 -61439179 - B3 SINE B2 -7 209 1 7 1033 252 0 0 0 chr13 58845899 58845927 -61438385 + (TTTTC)n Simple_repeat Simple_repeat 5 32 0 7 1033 297 0 0 0 chr13 58845927 58845959 -61438353 + (TTTCC)n Simple_repeat Simple_repeat 1 33 0 7 1033 1368 67 0 0 chr13 58845959 58846139 -61438173 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 7 1033 753 93 0 0 chr13 58846153 58846260 -61438052 + (TTTC)n Simple_repeat Simple_repeat 4 110 0 7 1033 450 94 0 0 chr13 58846256 58846320 -61437992 + (TCC)n Simple_repeat Simple_repeat 3 66 0 7 1033 930 107 0 22 chr13 58846320 58846454 -61437858 - B1_Mus2 SINE Alu 0 147 17 7 1033 425 182 46 83 chr13 58846368 58846476 -61437836 - MT2B LTR ERVL -344 257 154 7 1033 477 0 0 0 chr13 58846816 58846869 -61437443 + (GA)n Simple_repeat Simple_repeat 2 54 0 7 1033 863 233 213 25 chr13 58847485 58847842 -61436470 - RMER16 LTR ERVK 0 533 110 7 1033 708 186 141 18 chr13 58848511 58848693 -61435619 + MTD LTR MaLR 223 398 -21 7 1033 723 339 121 23 chr13 58849904 58850209 -61434103 + MLT1A0 LTR MaLR 3 337 -28 7 1033 956 138 7 0 chr13 58850381 58850526 -61433786 + B1_Mus2 SINE Alu 1 146 -1 7 1033 312 27 0 0 chr13 58850527 58850564 -61433748 + (CCAA)n Simple_repeat Simple_repeat 4 40 0 7 1033 1036 204 63 41 chr13 58850710 58850981 -61433331 - ORR1E LTR MaLR -82 277 1 7 1033 381 333 14 21 chr13 58850981 58851125 -61433187 - RMER15 LTR ERVL -157 418 276 7 1033 521 224 43 62 chr13 58851125 58851287 -61433025 - RMER15 LTR ERVL -416 159 1 7 1034 266 325 119 7 chr13 58852516 58852683 -61431629 + MIR SINE MIR 34 228 -40 7 1034 348 127 0 0 chr13 58853919 58853974 -61430338 + (T)n Simple_repeat Simple_repeat 1 55 0 7 1034 350 297 0 21 chr13 58856329 58856422 -61427890 + RMER30 DNA MER1_type 1 91 -111 7 1034 297 167 0 0 chr13 58856424 58856478 -61427834 + CT-rich Low_complexity Low_complexity 2 55 0 7 1034 351 44 0 0 chr13 58856478 58856523 -61427789 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1034 240 316 40 0 chr13 58856530 58856606 -61427706 - Charlie12 DNA MER1_type -2780 93 15 7 1034 207 262 0 0 chr13 58856683 58856725 -61427587 + polypurine Low_complexity Low_complexity 2 43 0 7 1034 606 39 0 0 chr13 58856812 58856889 -61427423 + (CA)n Simple_repeat Simple_repeat 2 78 0 7 1034 432 55 0 0 chr13 58856955 58857010 -61427302 + (GA)n Simple_repeat Simple_repeat 1 55 0 7 1034 785 107 0 8 chr13 58858559 58858682 -61425630 + (GAAA)n Simple_repeat Simple_repeat 4 125 0 7 1034 1340 79 23 0 chr13 58859718 58859895 -61424417 + B2_Mm2 SINE B2 1 181 -14 7 1034 558 302 62 84 chr13 58860320 58860371 -61423941 + MER58B DNA MER1_type 23 73 -268 7 1034 294 29 0 0 chr13 58860371 58860406 -61423906 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1034 940 229 30 0 chr13 58860412 58860613 -61423699 + B3 SINE B2 5 211 -5 7 1034 558 302 62 84 chr13 58860613 58860829 -61423483 + MER58B DNA MER1_type 74 291 -50 7 1034 396 0 0 0 chr13 58861030 58861074 -61423238 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1034 423 0 0 0 chr13 58861078 58861125 -61423187 + (GA)n Simple_repeat Simple_repeat 2 48 0 7 1034 568 331 116 35 chr13 58861127 58861437 -61422875 - MLT1A0 LTR MaLR -22 343 9 7 1034 455 232 208 6 chr13 58861693 58861871 -61422441 - B3 SINE B2 0 216 3 7 1034 501 361 122 17 chr13 58861949 58862293 -61422019 - MLT1J2 LTR MaLR 0 448 69 7 1034 4075 164 119 32 chr13 58862355 58863185 -61421127 - RMER19B LTR ERVK 0 902 1 7 1034 820 345 79 29 chr13 58863499 58864017 -61420295 - MLT1G LTR MaLR -22 569 33 7 1034 454 298 0 0 chr13 58864197 58864311 -61420001 + RSINE1 SINE B4 6 119 -46 7 1034 413 219 122 9 chr13 58864456 58864571 -61419741 + Charlie4a DNA MER1_type 5 132 -376 7 1034 673 194 47 0 chr13 58864574 58864703 -61419609 + B1_Mur1 SINE Alu 2 136 -13 7 1034 376 295 106 9 chr13 58864717 58864830 -61419482 + B1F SINE Alu 24 147 -2 7 1034 337 314 49 8 chr13 58864988 58865110 -61419202 + Charlie4a DNA MER1_type 167 291 -217 7 1034 189 0 0 0 chr13 58865680 58865701 -61418611 + (TTGG)n Simple_repeat Simple_repeat 3 23 0 7 1034 408 333 102 6 chr13 58866148 58866314 -61417998 - Tigger7 DNA MER2_type -2185 306 125 7 1034 406 242 61 30 chr13 58866478 58866610 -61417702 + Tigger7 DNA MER2_type 2167 2302 -189 7 1034 1613 216 70 11 chr13 58866657 58867031 -61417281 + MTD LTR MaLR 11 406 -13 7 1034 347 356 128 47 chr13 58867161 58867688 -61416624 - L1MC4a LINE L1 -2034 5848 5288 7 1034 2577 112 0 3 chr13 58867814 58868190 -61416122 - Lx LINE L1 0 6654 6280 7 1034 251 254 0 29 chr13 58868427 58868496 -61415816 + C-rich Low_complexity Low_complexity 3 69 0 7 1034 189 139 0 0 chr13 58869248 58869291 -61415021 + (T)n Simple_repeat Simple_repeat 1 43 0 7 1034 254 26 0 50 chr13 58869338 58869378 -61414934 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 7 1034 25 0 0 0 chr13 58869616 58869641 -61414671 + AT_rich Low_complexity Low_complexity 1 25 0 7 1034 1327 140 0 24 chr13 58869645 58869850 -61414462 - 7SLRNA srpRNA srpRNA -114 200 1 7 1034 2984 107 73 11 chr13 58869850 58870313 -61413999 - Lx2 LINE L1 -18 6979 6488 7 1034 202 209 0 23 chr13 58870829 58870873 -61413439 + (TGG)n Simple_repeat Simple_repeat 1 43 0 7 1034 1512 152 33 139 chr13 58871227 58871686 -61412626 - RMER17C LTR ERVK 0 410 1 7 1034 252 0 316 0 chr13 58871874 58872007 -61412305 + (CCTA)n Simple_repeat Simple_repeat 4 178 0 7 1034 265 305 206 23 chr13 58872036 58872050 -61412262 - RSINE1 SINE B4 -3 162 150 8 1034 486 0 0 0 chr13 58872050 58872104 -61412208 + (GA)n Simple_repeat Simple_repeat 1 54 0 8 1034 265 305 206 23 chr13 58872104 58872220 -61412092 - RSINE1 SINE B4 -16 149 8 8 1034 243 0 0 0 chr13 58872669 58872696 -61411616 + (TC)n Simple_repeat Simple_repeat 2 28 0 8 1034 279 0 0 0 chr13 58872696 58872726 -61411586 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1034 278 274 142 0 chr13 58872820 58872933 -61411379 + MLT1J LTR MaLR 238 366 -146 8 1034 231 36 0 0 chr13 58873461 58873489 -61410823 + (GGA)n Simple_repeat Simple_repeat 2 29 0 8 1034 965 303 42 8 chr13 58873538 58873801 -61410511 - B4A SINE B4 0 292 21 8 1034 261 0 0 0 chr13 58874115 58874144 -61410168 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1034 332 338 53 95 chr13 58874166 58874470 -61409842 - B4A SINE B4 0 292 2 8 1034 519 283 215 11 chr13 58874549 58874735 -61409577 + Lx8 LINE L1 6831 7054 -419 8 1034 336 235 118 26 chr13 58874783 58874936 -61409376 + Lx8 LINE L1 7305 7471 -2 8 1034 753 203 105 26 chr13 58875081 58875233 -61409079 - B3A SINE B2 -34 164 1 8 1034 297 306 67 135 chr13 58875371 58875579 -61408733 - MIR SINE MIR -48 214 21 8 1034 939 188 0 0 chr13 58875612 58875862 -61408450 + (CA)n Simple_repeat Simple_repeat 1 250 0 8 1034 5743 69 1 16 chr13 58876007 58876757 -61407555 - L1Md_F2 LINE L1 0 6582 5844 8 1034 591 178 89 56 chr13 58876786 58876965 -61407347 - B2_Mm2 SINE B2 -9 186 2 8 1034 21 0 0 0 chr13 58877969 58877990 -61406322 + AT_rich Low_complexity Low_complexity 1 21 0 8 1034 217 210 26 9 chr13 58879291 58879359 -61404953 + A-rich Low_complexity Low_complexity 1 69 0 8 1034 661 315 24 24 chr13 58879611 58879858 -61404454 + MLT2C1 LTR ERVL 56 302 -95 8 1034 274 0 48 24 chr13 58880720 58880762 -61403550 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 8 1034 1310 153 13 18 chr13 58881272 58881498 -61402814 - URR1A DNA MER1_type -1 225 1 8 1034 439 228 51 26 chr13 58881617 58881734 -61402578 - RLTR23 LTR ERV1 0 430 311 8 1034 243 0 0 0 chr13 58881974 58882001 -61402311 + (T)n Simple_repeat Simple_repeat 1 27 0 8 1034 1670 232 58 14 chr13 58882157 58882585 -61401727 - RMER1C Other Other -270 1072 626 8 1034 283 167 50 25 chr13 58882798 58882958 -61401354 + (TCTA)n Simple_repeat Simple_repeat 1 164 0 8 1034 314 98 0 19 chr13 58883052 58883104 -61401208 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1034 1200 207 132 10 chr13 58883522 58883810 -61400502 - ORR1D1 LTR MaLR -10 364 42 8 1034 3661 190 60 53 chr13 58883810 58884816 -61399496 - MYSERV16_I-int LTR ERVK -1464 1378 1 8 1034 4952 149 47 9 chr13 58885834 58886744 -61397568 + MYSERV16_I-int LTR ERVK 1382 2326 0 8 1034 2834 123 67 89 chr13 58886744 58887296 -61397016 + RLTR20A LTR ERVK 1 540 -1 8 1034 288 163 0 20 chr13 58887296 58887340 -61396972 - ORR1D1 LTR MaLR -324 43 1 8 1034 299 167 15 0 chr13 58887397 58887463 -61396849 + GA-rich Low_complexity Low_complexity 3 69 0 8 1034 235 91 18 35 chr13 58887860 58887917 -61396395 + (CAAAAA)n Simple_repeat Simple_repeat 5 60 0 8 1034 704 169 265 0 chr13 58889443 58889609 -61394703 - B3 SINE B2 -6 210 1 8 1034 686 301 32 26 chr13 58890189 58890400 -61393912 + L1MA6 LINE L1 5736 5951 -349 8 1034 247 192 60 71 chr13 58890400 58890484 -61393828 + ID4_ SINE ID 1 83 0 8 1034 686 313 47 93 chr13 58890484 58890808 -61393504 + L1MA6 LINE L1 5952 6248 -52 8 1034 377 221 13 0 chr13 58890810 58890887 -61393425 + B3A SINE B2 1 78 -120 8 1034 540 241 22 22 chr13 58891134 58891270 -61393042 + RSINE1 SINE B4 8 143 -22 8 1034 279 133 0 0 chr13 58891301 58891346 -61392966 + (TGAA)n Simple_repeat Simple_repeat 2 46 0 8 1034 845 188 104 45 chr13 58891366 58891567 -61392745 - B3 SINE B2 -3 213 1 8 1034 22 35 0 0 chr13 58891569 58891598 -61392714 + AT_rich Low_complexity Low_complexity 1 29 0 8 1034 223 85 43 0 chr13 58893439 58893486 -61390826 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 8 1034 422 331 78 43 chr13 58894337 58894659 -61389653 - L1MD2 LINE L1 -2 6357 6025 8 1034 769 193 21 0 chr13 58894692 58894832 -61389480 - ORR1D2 LTR MaLR -221 149 7 8 1034 320 307 150 0 chr13 58894906 58895046 -61389266 - L1MD2 LINE L1 -907 5239 5079 8 1034 610 271 65 10 chr13 58895058 58895259 -61389053 - B3 SINE B2 -3 213 2 8 1034 319 250 58 29 chr13 58895315 58895359 -61388953 - PB1D10 SINE Alu -5 112 66 8 1034 2796 47 6 55 chr13 58895359 58895723 -61388589 - ORR1A0 LTR MaLR 0 346 1 8 1034 13393 74 7 14 chr13 58895723 58897527 -61386785 - ORR1A0-int LTR MaLR 0 1792 1 8 1034 2934 46 3 0 chr13 58897527 58897872 -61386440 - ORR1A0 LTR MaLR 0 346 1 8 1034 319 250 58 29 chr13 58897872 58897928 -61386384 - PB1D10 SINE Alu -52 65 9 8 1034 1085 51 0 0 chr13 58898258 58898395 -61385917 - B1_Mm SINE Alu -9 138 2 8 1034 656 193 9 0 chr13 58898412 58898550 -61385762 - L1M2 LINE L1 -470 5686 5547 8 1034 899 236 176 12 chr13 58898632 58898943 -61385369 - ORR1D2 LTR MaLR -8 362 1 8 1034 716 248 261 7 chr13 58899947 58900245 -61384067 + ORR1D1 LTR MaLR 1 374 0 8 1034 593 245 27 20 chr13 58900245 58900395 -61383917 + ORR1D1-int LTR MaLR 1 151 -1107 8 1034 324 232 327 20 chr13 58900397 58900498 -61383814 + MTD LTR MaLR 269 419 0 8 1034 1653 134 101 4 chr13 58901896 58902174 -61382138 + Lx5 LINE L1 6741 7045 -5 8 1034 23 54 0 0 chr13 58902176 58902213 -61382099 + AT_rich Low_complexity Low_complexity 1 37 0 8 1034 2457 258 90 24 chr13 58902578 58903333 -61380979 - Lx8 LINE L1 0 7473 6669 8 1034 264 225 95 99 chr13 58903400 58903622 -61380690 + L1M2 LINE L1 5124 5344 -799 8 1034 380 307 0 11 chr13 58903639 58903728 -61380584 + ID SINE ID 2 89 -135 8 1034 252 347 0 75 chr13 58903728 58903745 -61380567 + BC1_Mm scRNA scRNA 2 99 -53 8 1034 519 254 36 64 chr13 58903751 58903838 -61380474 + L1M2 LINE L1 5355 5447 -856 8 1034 1782 207 62 6 chr13 58903838 58904192 -61380120 + ORR1D1 LTR MaLR 1 374 0 8 1034 519 254 36 64 chr13 58904192 58904323 -61379989 + L1M2 LINE L1 5448 5567 -736 8 1034 1764 124 133 10 chr13 58904342 58904635 -61379677 + ORR1A4 LTR MaLR 1 329 0 8 1034 446 254 112 0 chr13 58904641 58904775 -61379537 - L1M5 LINE L1 -2496 3650 3502 8 1034 429 54 0 0 chr13 58904776 58904832 -61379480 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1034 583 315 120 26 chr13 58904857 58905124 -61379188 - B4A SINE B4 0 292 1 8 1034 207 69 0 0 chr13 58905229 58905258 -61379054 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1034 438 233 17 193 chr13 58905342 58905523 -61378789 - B3 SINE B2 0 216 47 8 1034 841 86 14 14 chr13 58905563 58905704 -61378608 + (TTTC)n Simple_repeat Simple_repeat 1 141 0 8 1034 408 363 28 21 chr13 58905752 58905994 -61378318 - L1M5 LINE L1 -2980 3166 2932 8 1034 282 238 279 0 chr13 58907094 58907216 -61377096 + RSINE1 SINE B4 8 163 -2 8 1034 180 176 0 0 chr13 58908692 58908726 -61375586 + GA-rich Low_complexity Low_complexity 2 35 0 8 1034 183 184 0 0 chr13 58908889 58908927 -61375385 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1034 222 191 0 0 chr13 58909077 58909124 -61375188 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1034 24 0 0 0 chr13 58909205 58909229 -61375083 + GC_rich Low_complexity Low_complexity 1 24 0 8 1034 486 0 0 0 chr13 58912066 58912120 -61372192 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 1034 232 167 81 93 chr13 58913403 58913489 -61370823 - Zaphod2 DNA Tip100 -991 2533 2449 8 1034 324 0 0 0 chr13 58914566 58914602 -61369710 + (TA)n Simple_repeat Simple_repeat 1 36 0 8 1034 279 0 0 0 chr13 58914602 58914632 -61369680 + (GA)n Simple_repeat Simple_repeat 2 32 0 8 1034 198 26 77 0 chr13 58916875 58916914 -61367398 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 8 1034 619 286 6 13 chr13 58916940 58917096 -61367216 + RSINE1 SINE B4 9 163 -2 8 1034 257 311 51 97 chr13 58917096 58917132 -61367180 + B2_Mm2 SINE B2 10 192 -3 8 1034 285 312 0 0 chr13 58917405 58917485 -61366827 + ID4_ SINE ID 1 80 -3 8 1034 265 309 16 0 chr13 58917485 58917611 -61366701 + (CCAA)n Simple_repeat Simple_repeat 4 131 0 8 1034 874 254 121 71 chr13 58917731 58918070 -61366242 + MLT1A0 LTR MaLR 3 358 -7 8 1034 845 55 31 0 chr13 58918768 58918896 -61365416 + (TTCC)n Simple_repeat Simple_repeat 4 135 0 8 1034 342 0 0 0 chr13 58918896 58918934 -61365378 + (TC)n Simple_repeat Simple_repeat 2 39 0 8 1034 387 0 0 0 chr13 58918938 58918981 -61365331 + (TTTA)n Simple_repeat Simple_repeat 3 45 0 8 1034 214 336 104 30 chr13 58920141 58920276 -61364036 - L2a LINE L2 -15 3411 3267 8 1034 361 381 70 15 chr13 58920552 58920752 -61363560 - MamRep605 Unknown Unknown -287 589 379 8 1034 2082 161 71 13 chr13 58921300 58921696 -61362616 - MTD LTR MaLR 0 419 1 8 1034 418 370 61 64 chr13 58921779 58922105 -61362207 + MER115 DNA Tip100 30 354 -339 8 1034 281 299 35 0 chr13 58922128 58922215 -61362097 + L1M2 LINE L1 4898 4987 -1156 8 1034 207 333 73 9 chr13 58922535 58922644 -61361668 + L2b LINE L2 3229 3344 -31 8 1034 590 39 13 0 chr13 58922683 58922760 -61361552 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 8 1034 210 154 0 0 chr13 58923619 58923658 -61360654 + (TA)n Simple_repeat Simple_repeat 2 40 0 8 1034 21 82 0 0 chr13 58923807 58923856 -61360456 + AT_rich Low_complexity Low_complexity 1 49 0 8 1034 989 122 13 20 chr13 58924122 58924272 -61360040 - B1_Mur4 SINE Alu 0 150 2 8 1034 598 279 223 15 chr13 58925467 58925895 -61358417 - Lx7 LINE L1 -1783 5913 5392 8 1034 365 314 34 0 chr13 58926022 58926140 -61358172 + MIR SINE MIR 91 212 -50 8 1034 529 208 12 22 chr13 58927447 58927565 -61356747 - B1_Mur2 SINE Alu -10 110 3 8 1034 243 0 0 0 chr13 58927770 58927797 -61356515 + (GA)n Simple_repeat Simple_repeat 1 27 0 8 1034 650 321 235 20 chr13 58927827 58928627 -61355685 - L4 LINE RTE -180 1849 878 8 1034 399 238 22 11 chr13 58929716 58929811 -61354501 + MTD LTR MaLR 5 102 -305 8 1034 240 111 0 0 chr13 58929811 58929847 -61354465 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 1034 290 356 48 7 chr13 58929847 58929898 -61354414 + MTD LTR MaLR 103 157 -250 8 1034 656 221 150 34 chr13 58929955 58930189 -61354123 + MTD LTR MaLR 145 405 -14 8 1034 1006 152 104 38 chr13 58931362 58931574 -61352738 - URR1A DNA MER1_type 0 226 1 8 1034 243 0 0 0 chr13 58931849 58931876 -61352436 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8 1034 261 226 0 31 chr13 58932405 58932469 -61351843 - B3 SINE B2 -3 213 152 9 1034 795 220 58 11 chr13 58932474 58932662 -61351650 - B3 SINE B2 -19 197 1 9 1034 187 244 78 127 chr13 58932763 58932905 -61351407 - L2b LINE L2 -40 3386 3259 9 1034 423 0 0 0 chr13 58932922 58932969 -61351343 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 1034 289 350 9 13 chr13 58933911 58934048 -61350264 + CT-rich Low_complexity Low_complexity 1 136 0 9 1034 24 0 0 0 chr13 58934152 58934176 -61350136 + AT_rich Low_complexity Low_complexity 1 24 0 9 1034 221 211 18 0 chr13 58934414 58934471 -61349841 + (TA)n Simple_repeat Simple_repeat 2 59 0 9 1034 315 333 38 0 chr13 58934608 58934713 -61349599 - PB1D10 SINE Alu -2 115 7 9 1034 1095 231 0 0 chr13 58935125 58935337 -61348975 - B3 SINE B2 0 216 5 9 1034 869 164 0 7 chr13 58935738 58935885 -61348427 - B1_Mur2 SINE Alu -2 147 2 9 1034 255 93 0 0 chr13 58936087 58936130 -61348182 + (T)n Simple_repeat Simple_repeat 1 43 0 9 1034 180 219 91 30 chr13 58936166 58936232 -61348080 + L3 LINE CR1 2291 2360 -2129 9 1034 375 23 0 0 chr13 58936803 58936847 -61347465 + (TC)n Simple_repeat Simple_repeat 2 45 0 9 1034 283 257 19 38 chr13 58936847 58936894 -61347418 + (TG)n Simple_repeat Simple_repeat 1 47 0 9 1034 369 0 0 0 chr13 58936894 58936935 -61347377 + (TC)n Simple_repeat Simple_repeat 2 42 0 9 1034 283 257 19 38 chr13 58936935 58936992 -61347320 + (TG)n Simple_repeat Simple_repeat 1 56 0 9 1034 564 289 136 4 chr13 58937016 58937259 -61347053 - B4A SINE B4 -16 276 2 9 1034 480 111 0 0 chr13 58937609 58937681 -61346631 + (TCCA)n Simple_repeat Simple_repeat 1 72 0 9 1034 505 119 10 10 chr13 58937695 58937797 -61346515 + (CATA)n Simple_repeat Simple_repeat 4 105 0 9 1034 281 345 74 92 chr13 58938226 58938443 -61345869 - MLT1K LTR MaLR -253 342 130 9 1034 393 22 0 0 chr13 58940988 58941034 -61343278 + (TG)n Simple_repeat Simple_repeat 1 46 0 9 1034 31 0 0 0 chr13 58941047 58941078 -61343234 + AT_rich Low_complexity Low_complexity 1 31 0 9 1034 1316 14 0 0 chr13 58941081 58941227 -61343085 - B1_Mm SINE Alu 0 147 2 9 1034 2424 97 66 19 chr13 58941751 58942129 -61342183 + Lx LINE L1 6258 6653 -1 9 1034 378 0 0 0 chr13 58942710 58942752 -61341560 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 1034 463 195 8 8 chr13 58942831 58942950 -61341362 + C-rich Low_complexity Low_complexity 3 121 0 9 1034 187 31 62 0 chr13 58944364 58944396 -61339916 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 9 1034 457 270 183 46 chr13 58945908 58946257 -61338055 - L1MA4 LINE L1 -11 6289 5893 9 1034 309 238 0 0 chr13 58947633 58947713 -61336599 + (CATATA)n Simple_repeat Simple_repeat 1 80 0 9 1034 216 97 0 0 chr13 58949252 58949283 -61335029 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 9 1034 27 29 0 0 chr13 58950037 58950071 -61334241 + AT_rich Low_complexity Low_complexity 1 34 0 9 1034 729 204 45 23 chr13 58950071 58950247 -61334065 - B3 SINE B2 -13 203 24 9 1034 897 281 47 72 chr13 58951574 58951977 -61332335 - L1_Rod LINE L1 -522 5775 5383 9 1034 1292 263 100 25 chr13 58952036 58952555 -61331757 - L1_Mur3 LINE L1 -1723 4157 3600 9 1034 1273 322 71 36 chr13 58952568 58953466 -61330846 - L1_Rod LINE L1 -3563 2580 1647 9 1034 387 0 0 0 chr13 58953512 58953555 -61330757 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1034 324 325 159 0 chr13 58954032 58954158 -61330154 - RSINE1 SINE B4 -19 146 1 9 1034 252 184 0 0 chr13 58955659 58955708 -61328604 + (CA)n Simple_repeat Simple_repeat 2 50 0 9 1034 822 225 87 20 chr13 58955846 58956000 -61328312 + B3 SINE B2 4 167 -49 9 1034 456 19 0 0 chr13 58956000 58956053 -61328259 + (CATA)n Simple_repeat Simple_repeat 4 56 0 9 1034 822 225 87 20 chr13 58956053 58956093 -61328219 + B3 SINE B2 168 210 -6 9 1034 202 288 147 29 chr13 58957937 58958073 -61326239 + MIR SINE MIR 49 200 -62 9 1034 414 143 0 0 chr13 58958749 58958826 -61325486 + (TA)n Simple_repeat Simple_repeat 1 77 0 9 1034 605 262 59 140 chr13 58960738 58961146 -61323166 - MTE2a LTR MaLR -2 377 3 9 1034 288 0 0 0 chr13 58961380 58961412 -61322900 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 1034 543 31 0 0 chr13 58962538 58962603 -61321709 + (TC)n Simple_repeat Simple_repeat 1 65 0 9 1034 311 194 28 0 chr13 58964225 58964297 -61320015 - L1MD3 LINE L1 0 7995 7922 9 1034 294 241 95 12 chr13 58964735 58964819 -61319493 - RSINE1 SINE B4 -8 157 67 9 1034 791 292 18 14 chr13 58964936 58965217 -61319095 + B4A SINE B4 1 282 -10 9 1034 231 114 0 0 chr13 58965612 58965647 -61318665 + (A)n Simple_repeat Simple_repeat 1 35 0 9 1034 629 233 27 0 chr13 58968561 58968707 -61315605 + B3 SINE B2 61 210 -6 9 1034 294 245 94 21 chr13 58968981 58969077 -61315235 + PB1D7 SINE Alu 1 103 -17 9 1034 231 36 0 0 chr13 58969083 58969111 -61315201 + (CAAAG)n Simple_repeat Simple_repeat 2 29 0 9 1034 720 104 0 0 chr13 58969153 58969278 -61315034 + (GA)n Simple_repeat Simple_repeat 1 125 0 9 1034 668 257 0 0 chr13 58970082 58970218 -61314094 + B1_Mur1 SINE Alu 3 138 -11 9 1034 226 360 0 0 chr13 58971025 58971111 -61313201 + MER81 DNA AcHobo 28 113 -1 9 1034 216 0 0 0 chr13 58972848 58972872 -61311440 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1034 752 205 17 51 chr13 58976009 58976184 -61308128 - B3 SINE B2 0 216 48 9 1034 352 303 54 34 chr13 58976212 58976359 -61307953 - B3A SINE B2 -28 170 21 9 1034 306 73 0 0 chr13 58976971 58977012 -61307300 + (TA)n Simple_repeat Simple_repeat 1 41 0 9 1034 220 302 29 68 chr13 58977019 58977033 -61307279 - B3A SINE B2 -98 100 2 9 1034 311 302 22 34 chr13 58977033 58977122 -61307190 - RSINE1 SINE B4 -75 90 3 9 1034 791 300 59 40 chr13 58977142 58977465 -61306847 - MER44B DNA MER2_type -28 522 194 9 1034 1146 196 27 5 chr13 58978440 58978660 -61305652 - URR1B DNA MER1_type 0 225 1 9 1034 340 282 154 37 chr13 58978744 58978906 -61305406 + MER58A DNA MER1_type 44 224 0 9 1034 387 191 324 20 chr13 58978951 58979109 -61305203 + MTD LTR MaLR 214 419 0 9 1034 205 269 87 56 chr13 58979329 58979455 -61304857 + MIR SINE MIR 123 252 -10 9 1035 229 286 0 0 chr13 58982637 58982707 -61301605 + T-rich Low_complexity Low_complexity 1 70 0 9 1035 243 0 0 0 chr13 58983823 58983850 -61300462 + (A)n Simple_repeat Simple_repeat 1 27 0 9 1035 1324 157 84 22 chr13 58984148 58984306 -61300006 - ORR1C1 LTR MaLR -39 339 164 9 1035 405 0 0 0 chr13 58984306 58984351 -61299961 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 1035 1324 157 84 22 chr13 58984351 58984466 -61299846 - ORR1C1 LTR MaLR -215 163 49 9 1035 421 244 33 42 chr13 58985101 58985221 -61299091 - PB1D7 SINE Alu 0 120 2 9 1035 641 261 22 0 chr13 58985934 58986114 -61298198 - B3 SINE B2 -29 187 4 9 1035 24 0 0 0 chr13 58986287 58986311 -61298001 + AT_rich Low_complexity Low_complexity 1 24 0 9 1035 311 292 0 27 chr13 58986358 58986432 -61297880 - Lx8 LINE L1 -269 7204 7133 9 1035 379 267 159 48 chr13 58986460 58986712 -61297600 + Lx8 LINE L1 7194 7473 0 9 1035 444 37 0 0 chr13 58987325 58987379 -61296933 + (TCCCC)n Simple_repeat Simple_repeat 4 57 0 9 1035 281 161 24 36 chr13 58988770 58988854 -61295458 + GA-rich Low_complexity Low_complexity 2 84 0 9 1035 939 169 0 0 chr13 58989103 58989280 -61295032 + A-rich Low_complexity Low_complexity 4 180 0 9 1035 2363 264 100 40 chr13 58989857 58990823 -61293489 - Lx8 LINE L1 -698 6775 5752 9 1035 384 105 316 9 chr13 58990837 58990951 -61293361 - B2_Mm2 SINE B2 0 195 47 9 1035 1257 115 0 42 chr13 58990972 58991163 -61293149 - B2_Mm2 SINE B2 -11 184 2 9 1035 625 241 34 48 chr13 58991163 58991372 -61292940 - Lx8 LINE L1 -130 5717 5512 9 1035 2152 101 94 8 chr13 58991657 58992018 -61292294 - ORR1B1 LTR MaLR -2 392 1 9 1035 2568 49 46 3 chr13 58994063 58994412 -61289900 + MTB LTR MaLR 29 392 -8 9 1035 471 327 9 67 chr13 58994735 58995063 -61289249 - MER31A LTR ERV1 -167 318 10 9 1035 450 0 0 0 chr13 58996440 58996490 -61287822 + (TG)n Simple_repeat Simple_repeat 2 51 0 9 1035 1152 68 0 20 chr13 58997229 58997241 -61287071 - B1_Mus1 SINE Alu 0 148 139 9 1035 200 59 29 0 chr13 58997241 58997275 -61287037 + (TTG)n Simple_repeat Simple_repeat 2 36 0 9 1035 1152 68 0 20 chr13 58997275 58997413 -61286899 - B1_Mus1 SINE Alu -10 138 1 9 1035 186 71 0 0 chr13 58998249 58998277 -61286035 + (TA)n Simple_repeat Simple_repeat 2 29 0 9 1035 706 220 0 7 chr13 58998578 58998720 -61285592 + B1_Mur1 SINE Alu 1 141 -8 9 1035 509 338 42 9 chr13 58999364 58999576 -61284736 + Tigger5 DNA MER2_type 22 240 -2166 9 1035 250 269 64 46 chr13 58999566 58999675 -61284637 + Tigger5 DNA MER2_type 2296 2406 0 9 1035 1331 51 6 0 chr13 58999842 59000000 -61284312 + L1Md_F3 LINE L1 6133 6291 -293 9 1035 2411 38 3 3 chr13 59000000 59000292 -61284020 + L1Md_F3 LINE L1 6292 6583 -1 1 1035 27 49 0 0 chr13 59000293 59000334 -61283978 + AT_rich Low_complexity Low_complexity 1 41 0 2 1035 244 352 22 43 chr13 59000355 59000447 -61283865 + MER5A DNA MER1_type 13 102 -87 3 1035 600 354 118 26 chr13 59000828 59001251 -61283061 - LTR40b LTR ERVL 0 462 1 4 1035 1091 224 9 14 chr13 59001569 59001782 -61282530 + B3 SINE B2 5 216 0 5 1035 262 377 0 0 chr13 59002120 59002197 -61282115 - MER63C DNA AcHobo -546 384 308 6 1035 216 158 0 0 chr13 59003141 59003179 -61281133 + (ATG)n Simple_repeat Simple_repeat 2 39 0 7 1035 24 0 0 0 chr13 59004412 59004436 -61279876 + GC_rich Low_complexity Low_complexity 1 24 0 8 1035 490 241 0 25 chr13 59005414 59005576 -61278736 + (TATG)n Simple_repeat Simple_repeat 1 158 0 9 1035 243 304 0 0 chr13 59005594 59005719 -61278593 + (TG)n Simple_repeat Simple_repeat 2 126 0 1 1035 564 130 0 0 chr13 59008708 59008800 -61275512 + (TG)n Simple_repeat Simple_repeat 1 92 0 1 1035 196 312 0 0 chr13 59008851 59008899 -61275413 - L2c LINE L2 -8 3379 3332 1 1035 225 261 100 85 chr13 59008947 59009077 -61275235 + Zaphod2 DNA Tip100 510 641 -2883 1 1035 1311 79 0 0 chr13 59009451 59009616 -61274696 + L1_Mus1 LINE L1 5970 6134 -433 1 1035 243 0 0 0 chr13 59009626 59009653 -61274659 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1035 288 0 0 0 chr13 59010023 59010055 -61274257 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 1035 220 340 11 11 chr13 59010496 59010591 -61273721 - MIR SINE MIR -10 252 158 1 1035 789 110 0 0 chr13 59010998 59011116 -61273196 + (TTCC)n Simple_repeat Simple_repeat 2 119 0 1 1035 2306 162 16 26 chr13 59011975 59012399 -61271913 - MTC LTR MaLR -1 420 1 1 1035 337 324 32 51 chr13 59012412 59012568 -61271744 + MIRb SINE MIR 1 153 -115 2 1035 1799 154 116 23 chr13 59013189 59013535 -61270777 - ORR1C1 LTR MaLR 0 378 1 2 1035 199 325 139 16 chr13 59013760 59013882 -61270430 - MIR3 SINE MIR -30 178 42 2 1035 485 294 6 0 chr13 59013882 59014045 -61270267 + (CCCTG)n Simple_repeat Simple_repeat 4 167 0 2 1035 465 325 0 6 chr13 59014078 59014248 -61270064 + (CCCTG)n Simple_repeat Simple_repeat 3 171 0 2 1035 248 0 31 0 chr13 59014419 59014451 -61269861 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 2 1035 428 267 73 15 chr13 59016122 59016259 -61268053 - B1F1 SINE Alu -4 145 1 2 1035 227 262 51 116 chr13 59017219 59017357 -61266955 - MIRb SINE MIR -32 236 108 2 1035 378 42 0 0 chr13 59017669 59017717 -61266595 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1035 507 33 0 0 chr13 59018171 59018232 -61266080 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1035 180 0 0 0 chr13 59018232 59018251 -61266061 + (GA)n Simple_repeat Simple_repeat 1 20 0 2 1035 195 235 0 0 chr13 59018260 59018311 -61266001 + (TATATG)n Simple_repeat Simple_repeat 6 56 0 3 1035 365 278 66 71 chr13 59018447 59018629 -61265683 - B2_Mm2 SINE B2 -10 185 5 3 1035 279 281 0 0 chr13 59018857 59018914 -61265398 + Cheshire DNA MER1_type 173 229 -2191 3 1035 195 69 0 0 chr13 59020413 59020442 -61263870 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1035 327 65 0 0 chr13 59020888 59020934 -61263378 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 3 1035 465 311 109 67 chr13 59021265 59021596 -61262716 + MamRep434 DNA TcMar 82 426 0 3 1035 259 402 17 0 chr13 59022069 59022186 -61262126 - MLT1A0 LTR MaLR -20 345 227 3 1035 986 284 66 43 chr13 59022283 59022633 -61261679 - ORR1D2 LTR MaLR -8 362 5 3 1035 637 290 28 28 chr13 59022972 59023153 -61261159 + B3 SINE B2 2 182 -34 3 1035 226 261 54 54 chr13 59024756 59024849 -61259463 - Charlie26a DNA MER1_type -17 308 216 3 1035 300 91 0 0 chr13 59025356 59025400 -61258912 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1035 944 219 54 0 chr13 59025453 59025658 -61258654 - B3 SINE B2 0 216 1 4 1035 589 172 121 0 chr13 59025664 59025763 -61258549 - PB1D9 SINE Alu -9 111 1 4 1035 499 274 116 17 chr13 59025784 59026025 -61258287 - Lx8 LINE L1 0 7473 7209 4 1035 257 234 28 99 chr13 59026183 59026254 -61258058 + RSINE1 SINE B4 37 102 -63 4 1035 306 0 0 0 chr13 59026254 59026288 -61258024 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1035 432 238 0 0 chr13 59026350 59026476 -61257836 + (TATG)n Simple_repeat Simple_repeat 1 126 0 4 1035 240 223 49 28 chr13 59028476 59028619 -61255693 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 4 1035 432 0 0 0 chr13 59028907 59028955 -61255357 + (TTA)n Simple_repeat Simple_repeat 1 48 0 4 1035 402 39 0 0 chr13 59031102 59031154 -61253158 + (TC)n Simple_repeat Simple_repeat 2 53 0 4 1035 234 0 0 0 chr13 59031154 59031179 -61253133 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1035 459 0 0 0 chr13 59031179 59031229 -61253083 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1035 21 0 0 0 chr13 59031485 59031506 -61252806 + AT_rich Low_complexity Low_complexity 1 21 0 5 1035 180 0 0 0 chr13 59031559 59031579 -61252733 + (TTA)n Simple_repeat Simple_repeat 2 21 0 5 1035 495 287 82 16 chr13 59032307 59032491 -61251821 + MIR SINE MIR 34 229 -33 5 1035 1141 79 27 10 chr13 59033819 59034114 -61250198 + (TCTA)n Simple_repeat Simple_repeat 1 300 0 5 1035 602 238 143 38 chr13 59036091 59036301 -61248011 - Charlie8 DNA MER1_type -2196 232 1 5 1035 200 59 29 0 chr13 59038679 59038713 -61245599 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1035 1347 52 40 11 chr13 59039652 59039826 -61244486 - B2_Mm2 SINE B2 -14 181 3 5 1035 21 0 0 0 chr13 59041516 59041537 -61242775 + AT_rich Low_complexity Low_complexity 1 21 0 5 1035 396 0 0 0 chr13 59041547 59041591 -61242721 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1035 353 243 110 18 chr13 59042441 59042550 -61241762 - PB1D7 SINE Alu 0 120 2 6 1035 301 326 45 15 chr13 59043693 59043827 -61240485 - MER102b DNA MER1_type -110 231 94 6 1035 997 136 6 6 chr13 59044441 59044619 -61239693 + (TTC)n Simple_repeat Simple_repeat 1 178 0 6 1035 387 0 0 0 chr13 59044626 59044669 -61239643 + (TCC)n Simple_repeat Simple_repeat 1 43 0 6 1035 242 340 104 0 chr13 59044669 59044775 -61239537 - B1F SINE Alu 0 149 33 6 1035 547 242 255 0 chr13 59044682 59044835 -61239477 - ID_B1 SINE B4 -17 207 16 6 1035 1031 204 19 19 chr13 59045683 59045888 -61238424 - B3 SINE B2 -11 205 1 6 1035 399 286 167 9 chr13 59046679 59046894 -61237418 - MLT1C LTR MaLR -79 388 140 6 1035 236 252 167 68 chr13 59047434 59047596 -61236716 - Charlie8 DNA MER1_type -2190 238 61 6 1035 25 31 0 0 chr13 59048474 59048506 -61235806 + AT_rich Low_complexity Low_complexity 1 32 0 7 1035 285 292 81 81 chr13 59048735 59048841 -61235471 - MER102b DNA MER1_type -162 179 77 7 1035 242 29 0 28 chr13 59048841 59048877 -61235435 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1035 285 292 81 81 chr13 59048877 59048919 -61235393 - MER102b DNA MER1_type -265 76 31 7 1035 340 283 133 143 chr13 59049434 59049727 -61234585 + B4A SINE B4 3 292 0 7 1035 270 247 24 36 chr13 59049731 59049815 -61234497 + (CA)n Simple_repeat Simple_repeat 1 83 0 7 1035 360 0 0 0 chr13 59050055 59050095 -61234217 + (CA)n Simple_repeat Simple_repeat 2 41 0 7 1035 471 269 18 12 chr13 59050417 59050763 -61233549 + (TG)n Simple_repeat Simple_repeat 1 348 0 7 1035 490 326 122 10 chr13 59051215 59051503 -61232809 - L1M5 LINE L1 -311 5813 5494 7 1035 234 246 0 32 chr13 59051555 59051740 -61232572 + (TG)n Simple_repeat Simple_repeat 2 180 0 7 1035 284 235 25 0 chr13 59051746 59051827 -61232485 + (TCTG)n Simple_repeat Simple_repeat 3 85 0 7 1035 300 262 0 0 chr13 59051833 59052001 -61232311 + (TG)n Simple_repeat Simple_repeat 1 168 0 8 1035 474 306 0 6 chr13 59052029 59052210 -61232102 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 1035 218 267 33 0 chr13 59054058 59054118 -61230194 + GA-rich Low_complexity Low_complexity 2 63 0 8 1035 225 182 12 49 chr13 59054180 59054261 -61230051 + (CATA)n Simple_repeat Simple_repeat 2 79 0 8 1035 226 249 74 70 chr13 59054261 59054490 -61229822 - RLTR21 LTR ERVK -269 1303 1074 8 1035 446 237 30 0 chr13 59054491 59054660 -61229652 + (CATATA)n Simple_repeat Simple_repeat 1 174 0 8 1035 191 361 102 29 chr13 59054714 59054851 -61229461 + MER5B DNA MER1_type 32 178 0 8 1035 373 261 146 0 chr13 59055051 59055216 -61229096 + MER53 DNA hAT 1 189 -4 8 1035 661 285 0 42 chr13 59055977 59056025 -61228287 + RSINE1 SINE B4 2 49 -116 8 1035 2532 80 8 71 chr13 59056025 59056418 -61227894 - RLTR9A LTR ERVK 0 368 1 8 1035 661 285 0 42 chr13 59056418 59056534 -61227778 + RSINE1 SINE B4 50 159 -6 8 1035 207 0 0 0 chr13 59059053 59059076 -61225236 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1035 407 162 62 54 chr13 59059077 59059207 -61225105 - MYSERV6-int LTR ERVK -3986 4973 4843 9 1035 2176 148 58 13 chr13 59059486 59059868 -61224444 - RMER13B LTR ERVK -509 399 1 9 1035 1204 236 85 20 chr13 59059868 59060210 -61224102 + MTD LTR MaLR 56 419 0 9 1035 25 0 0 0 chr13 59060709 59060734 -61223578 + AT_rich Low_complexity Low_complexity 1 25 0 9 1035 459 204 10 0 chr13 59060885 59060988 -61223324 + ID_B1 SINE B4 118 221 -3 9 1035 638 85 11 0 chr13 59063317 59063411 -61220901 + (CATAT)n Simple_repeat Simple_repeat 4 98 0 9 1035 241 233 16 16 chr13 59064584 59064663 -61219649 + (CAGAGA)n Simple_repeat Simple_repeat 1 79 0 9 1035 314 254 78 83 chr13 59064761 59064954 -61219358 - MTEa LTR MaLR 0 379 188 9 1035 756 264 45 41 chr13 59067187 59067335 -61216977 + ID_B1 SINE B4 3 158 -66 9 1035 1927 141 87 11 chr13 59067335 59067506 -61216806 + ORR1B1 LTR MaLR 1 189 -205 9 1035 198 0 0 0 chr13 59067506 59067528 -61216784 + (TCTG)n Simple_repeat Simple_repeat 2 23 0 1 1035 1927 141 87 11 chr13 59067528 59067722 -61216590 + ORR1B1 LTR MaLR 190 394 0 9 1035 756 264 45 41 chr13 59067722 59067794 -61216518 + ID_B1 SINE B4 159 224 0 9 1035 251 356 11 0 chr13 59067805 59067892 -61216420 - MLT1C LTR MaLR -8 459 372 1 1035 627 324 84 43 chr13 59067983 59068121 -61216191 + ORR1D2 LTR MaLR 1 141 -229 1 1035 1020 111 0 0 chr13 59068121 59068301 -61216011 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1035 627 324 84 43 chr13 59068301 59068452 -61215860 + ORR1D2 LTR MaLR 142 293 -77 1 1035 597 28 0 0 chr13 59068452 59068523 -61215789 + (CAG)n Simple_repeat Simple_repeat 3 73 0 1 1035 627 324 84 43 chr13 59068523 59068577 -61215735 + ORR1D2 LTR MaLR 294 358 -12 1 1035 235 308 10 71 chr13 59068586 59068684 -61215628 - MLT1C LTR MaLR -235 130 39 1 1035 749 22 0 0 chr13 59069007 59069097 -61215215 + B1_Mus2 SINE Alu 58 147 0 1 1035 341 88 12 36 chr13 59069097 59069180 -61215132 + (CAAAAA)n Simple_repeat Simple_repeat 6 86 0 1 1035 1583 311 76 39 chr13 59069494 59070304 -61214008 - Lx7 LINE L1 -1 7472 6627 1 1035 337 290 71 77 chr13 59072042 59072210 -61212102 - MER20 DNA MER1_type -45 174 8 1 1035 22 0 0 0 chr13 59073611 59073633 -61210679 + AT_rich Low_complexity Low_complexity 1 22 0 1 1035 744 265 47 19 chr13 59074162 59074377 -61209935 - MER2 DNA MER2_type -7 338 118 1 1035 366 80 0 0 chr13 59074387 59074437 -61209875 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1035 941 152 0 4 chr13 59074716 59074871 -61209441 + (GTATG)n Simple_repeat Simple_repeat 1 154 0 1 1035 1107 117 0 0 chr13 59074871 59075051 -61209261 + (TATAG)n Simple_repeat Simple_repeat 1 180 0 1 1035 941 145 0 6 chr13 59075051 59075119 -61209193 + (GTATG)n Simple_repeat Simple_repeat 2 69 0 1 1035 236 291 56 37 chr13 59075868 59075975 -61208337 - L2 LINE L2 -582 2837 2729 1 1035 229 330 57 0 chr13 59076625 59076713 -61207599 - MLT1J1 LTR MaLR -316 128 36 1 1035 806 254 51 15 chr13 59076775 59076971 -61207341 - B3 SINE B2 -7 209 7 1 1035 239 211 0 90 chr13 59078281 59078359 -61205953 + Lx4B LINE L1 6987 7057 -1 1 1035 225 279 61 37 chr13 59078858 59078940 -61205372 - ORR1E LTR MaLR -241 118 35 1 1035 477 0 0 0 chr13 59078969 59079022 -61205290 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1035 310 368 120 5 chr13 59079528 59079719 -61204593 - Tigger5 DNA MER2_type -2148 258 46 1 1035 373 238 0 12 chr13 59080764 59080845 -61203467 + ID4 SINE ID 4 83 0 1 1035 297 0 0 0 chr13 59081721 59081754 -61202558 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 1 1035 234 0 0 0 chr13 59082031 59082057 -61202255 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1035 442 301 93 68 chr13 59083340 59083618 -61200694 - MER74A LTR ERVL -28 530 246 1 1035 486 0 0 0 chr13 59085046 59085100 -61199212 + (GA)n Simple_repeat Simple_repeat 2 55 0 1 1035 708 255 112 25 chr13 59086492 59086811 -61197501 + L1MB8 LINE L1 5457 5850 -328 1 1035 348 24 0 0 chr13 59086811 59086852 -61197460 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 1035 708 275 188 22 chr13 59086852 59087130 -61197182 + L1MB8 LINE L1 5851 6174 -4 1 1035 1021 226 58 8 chr13 59088913 59089172 -61195140 + Lx9 LINE L1 7246 7517 -127 1 1035 509 169 27 13 chr13 59089184 59089334 -61194978 + (TCTA)n Simple_repeat Simple_repeat 4 155 0 1 1035 759 100 37 24 chr13 59089364 59089528 -61194784 + Lx9 LINE L1 7478 7643 -1 1 1035 315 0 0 0 chr13 59091184 59091219 -61193093 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 1 1035 24 53 0 0 chr13 59093015 59093053 -61191259 + AT_rich Low_complexity Low_complexity 1 38 0 1 1035 21 0 0 0 chr13 59093530 59093551 -61190761 + AT_rich Low_complexity Low_complexity 1 21 0 1 1035 270 303 44 44 chr13 59094571 59094685 -61189627 - MER81 DNA AcHobo 0 114 1 1 1035 298 303 31 50 chr13 59097593 59097753 -61186559 - MER96B DNA hAT -2 415 259 1 1035 705 136 17 17 chr13 59098293 59098408 -61185904 + polypurine Low_complexity Low_complexity 1 116 0 1 1035 1300 62 0 11 chr13 59098408 59098589 -61185723 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 1 1035 705 136 17 17 chr13 59098589 59098653 -61185659 + polypurine Low_complexity Low_complexity 117 180 0 1 1035 1152 171 66 0 chr13 59099410 59099621 -61184691 - URR1B DNA MER1_type 0 225 1 1 1035 1191 41 7 0 chr13 59099783 59099929 -61184383 + B1_Mus1 SINE Alu 1 147 -1 1 1035 28 0 0 0 chr13 59099934 59099962 -61184350 + AT_rich Low_complexity Low_complexity 1 28 0 1 1035 1032 103 0 0 chr13 59099969 59100143 -61184169 + (GGAAA)n Simple_repeat Simple_repeat 3 176 0 1 1035 1157 256 11 19 chr13 59101996 59102267 -61182045 + B4A SINE B4 20 288 -4 1 1035 240 296 75 75 chr13 59102242 59102388 -61181924 - RMER12 LTR ERVK -472 850 705 1 1035 252 375 48 0 chr13 59102406 59102510 -61181802 - MIR SINE MIR -125 137 29 1 1035 183 156 0 0 chr13 59104159 59104191 -61180121 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1035 183 213 0 96 chr13 59105541 59105593 -61178719 + L2 LINE L2 1849 1895 -1524 1 1035 312 27 0 0 chr13 59107644 59107681 -61176631 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1035 257 288 17 0 chr13 59107985 59108044 -61176268 - MIRc SINE MIR -177 91 32 1 1035 1139 88 0 0 chr13 59108180 59108328 -61175984 - B1_Mus1 SINE Alu 0 148 1 1 1035 194 0 39 0 chr13 59108334 59108360 -61175952 + (TTTG)n Simple_repeat Simple_repeat 4 30 0 1 1035 880 232 25 10 chr13 59108489 59108685 -61175627 + B3 SINE B2 1 199 -17 1 1035 470 289 34 82 chr13 59108957 59109164 -61175148 - B3A SINE B2 0 198 2 1 1035 691 255 0 28 chr13 59109174 59109319 -61174993 - B1_Mur1 SINE Alu -6 143 3 1 1035 918 296 69 40 chr13 59109729 59110077 -61174235 - MTEa LTR MaLR -19 360 3 1 1035 227 175 333 0 chr13 59110428 59110485 -61173827 - MLT1H2 LTR MaLR -18 471 396 1 1035 503 190 17 0 chr13 59111786 59111902 -61172410 + CT-rich Low_complexity Low_complexity 2 119 0 1 1035 328 256 30 53 chr13 59112059 59112191 -61172121 - L1ME2z LINE L1 -294 6150 6022 1 1036 213 39 0 0 chr13 59114951 59114977 -61169335 + (TCC)n Simple_repeat Simple_repeat 3 28 0 1 1036 206 352 45 36 chr13 59116378 59116490 -61167822 - L2b LINE L2 -3 3372 3260 1 1036 300 208 19 0 chr13 59116666 59116719 -61167593 - PB1D10 SINE Alu -46 71 18 1 1036 739 299 141 58 chr13 59116742 59117190 -61167122 - L1MD1 LINE L1 -24 6609 6115 1 1036 1260 237 75 33 chr13 59117190 59117552 -61166760 - MTEa LTR MaLR -2 377 1 1 1036 739 299 141 58 chr13 59117552 59117735 -61166577 - L1MD1 LINE L1 -519 6114 5926 1 1036 413 320 63 54 chr13 59117788 59118214 -61166098 - L1MD1 LINE L1 -814 5723 5294 1 1036 406 362 73 53 chr13 59118231 59118628 -61165684 - MLT1C LTR MaLR -10 457 53 1 1036 421 269 36 51 chr13 59118628 59118765 -61165547 - Lx8 LINE L1 -193 7280 7146 1 1036 742 284 183 29 chr13 59118745 59119503 -61164809 - L1MD1 LINE L1 -3240 3297 2412 1 1036 209 57 0 28 chr13 59119503 59119539 -61164773 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1036 742 255 121 62 chr13 59119539 59119814 -61164498 - L1MD1 LINE L1 -4222 2411 2119 1 1036 372 94 0 0 chr13 59119933 59119986 -61164326 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1036 612 0 0 0 chr13 59119995 59120063 -61164249 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 1036 334 328 75 8 chr13 59120075 59120195 -61164117 + B3 SINE B2 84 211 -5 1 1036 258 232 49 29 chr13 59120208 59120310 -61164002 - L1MD1 LINE L1 -4750 1883 1780 1 1036 308 83 0 20 chr13 59120324 59120373 -61163939 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1036 189 0 0 0 chr13 59120373 59120394 -61163918 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1036 401 327 59 97 chr13 59120403 59120691 -61163621 - B4 SINE B4 -10 282 6 1 1036 183 156 0 0 chr13 59120854 59120886 -61163426 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1 1036 263 122 20 0 chr13 59120885 59120934 -61163378 + (TCC)n Simple_repeat Simple_repeat 2 51 0 1 1036 617 352 108 52 chr13 59121006 59121636 -61162676 - L1MD1 LINE L1 -5154 1479 815 1 1036 247 314 24 48 chr13 59121779 59121903 -61162409 - L1MD1 LINE L1 -5764 869 749 1 1036 432 0 0 0 chr13 59121932 59121980 -61162332 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 1036 293 280 127 8 chr13 59123247 59123373 -61160939 - Lx8 LINE L1 -149 7324 7184 1 1036 345 213 104 59 chr13 59124608 59124743 -61159569 - MLT1A1 LTR MaLR 0 408 268 1 1036 2314 127 108 28 chr13 59125639 59126037 -61158275 - RLTR23 LTR ERV1 0 430 1 1 1036 294 346 23 8 chr13 59126653 59126784 -61157528 + MIRc SINE MIR 109 241 -27 1 1036 1246 87 52 6 chr13 59128068 59128241 -61156071 + B2_Mm2 SINE B2 1 181 -14 1 1036 301 111 364 13 chr13 59128253 59128360 -61155952 + B2_Mm2 SINE B2 46 185 -10 1 1036 534 174 78 60 chr13 59129414 59129530 -61154782 + B3A SINE B2 2 119 -79 1 1036 369 0 0 0 chr13 59129596 59129637 -61154675 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1036 224 59 29 0 chr13 59129939 59129973 -61154339 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 1 1036 262 301 0 27 chr13 59130944 59131019 -61153293 + MIRb SINE MIR 166 238 -30 1 1036 237 92 0 0 chr13 59133374 59133439 -61150873 + (TGGA)n Simple_repeat Simple_repeat 1 65 0 1 1036 1059 86 17 0 chr13 59133446 59133620 -61150692 + (TAGA)n Simple_repeat Simple_repeat 1 177 0 1 1036 1184 45 23 0 chr13 59133633 59133809 -61150503 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 1036 256 296 53 53 chr13 59133848 59133962 -61150350 - MIR3 SINE MIR -1 207 94 1 1036 227 186 0 23 chr13 59134109 59134153 -61150159 + CT-rich Low_complexity Low_complexity 1 43 0 1 1036 807 208 51 56 chr13 59134438 59134652 -61149660 - B3 SINE B2 -3 213 1 1 1036 195 350 0 57 chr13 59135104 59135210 -61149102 + L2c LINE L2 3283 3382 -5 1 1036 210 150 0 0 chr13 59136326 59136366 -61147946 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1036 195 100 0 0 chr13 59136986 59137016 -61147296 + (TTTTTA)n Simple_repeat Simple_repeat 4 33 0 1 1036 560 221 93 13 chr13 59137031 59137182 -61147130 - RSINE1 SINE B4 0 165 3 1 1036 1292 62 83 11 chr13 59138475 59138497 -61145815 - B2_Mm2 SINE B2 -1 194 172 1 1036 264 122 0 0 chr13 59138497 59138538 -61145774 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1036 1292 62 83 11 chr13 59138538 59138696 -61145616 - B2_Mm2 SINE B2 -24 171 2 1 1036 243 0 0 0 chr13 59138827 59138854 -61145458 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1036 249 109 0 0 chr13 59140936 59140982 -61143330 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 1 1036 25 0 0 0 chr13 59142314 59142339 -61141973 + AT_rich Low_complexity Low_complexity 1 25 0 2 1036 531 0 0 0 chr13 59142515 59142574 -61141738 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1036 249 108 0 0 chr13 59143088 59143125 -61141187 + (T)n Simple_repeat Simple_repeat 1 37 0 2 1036 224 315 0 0 chr13 59143240 59143294 -61141018 - MIRb SINE MIR -120 148 95 2 1036 220 287 93 56 chr13 59143522 59143629 -61140683 + L2b LINE L2 3069 3179 -196 2 1036 296 390 8 33 chr13 59144033 59144155 -61140157 + ID_B1 SINE B4 81 199 -25 2 1036 450 0 0 0 chr13 59144229 59144279 -61140033 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2 1036 408 88 0 0 chr13 59144279 59144312 -61140000 - B1_Mm SINE Alu -2 145 113 2 1036 491 174 15 0 chr13 59144312 59144417 -61139895 + B1_Mus1 SINE Alu 3 112 -35 2 1036 480 266 24 0 chr13 59144417 59144541 -61139771 + B3 SINE B2 2 128 -88 2 1036 378 321 42 84 chr13 59144947 59145161 -61139151 - MLT1K LTR MaLR -35 560 356 2 1036 233 377 64 24 chr13 59145205 59145330 -61138982 - MLT1K LTR MaLR -408 187 58 2 1036 588 29 0 0 chr13 59145749 59145819 -61138493 + (TG)n Simple_repeat Simple_repeat 1 70 0 2 1036 326 239 10 61 chr13 59146252 59146350 -61137962 - HAL1-3A_ME LINE L1 -791 2067 1975 2 1036 464 179 0 9 chr13 59146360 59146473 -61137839 + (TG)n Simple_repeat Simple_repeat 1 112 0 2 1036 25 83 0 0 chr13 59146494 59146554 -61137758 + AT_rich Low_complexity Low_complexity 1 60 0 2 1036 1056 82 61 0 chr13 59146974 59147121 -61137191 - B2_Mm2 SINE B2 -38 157 2 2 1036 7574 96 6 5 chr13 59147245 59148345 -61135967 - MusHAL1 LINE L1 -625 2087 987 2 1036 3967 106 184 18 chr13 59148342 59149017 -61135295 - L1VL2 LINE L1 -5592 826 92 2 1036 261 0 0 0 chr13 59149251 59149280 -61135032 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1036 536 159 8 23 chr13 59151628 59151652 -61132660 + polypyrimidine Low_complexity Low_complexity 107 128 0 2 1036 1295 67 11 0 chr13 59151652 59151830 -61132482 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 2 1036 536 159 8 23 chr13 59151830 59151934 -61132378 + CT-rich Low_complexity Low_complexity 3 106 0 2 1036 252 276 40 0 chr13 59151934 59152010 -61132302 + C-rich Low_complexity Low_complexity 2 80 0 2 1036 516 16 0 0 chr13 59152034 59152095 -61132217 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1036 252 0 0 0 chr13 59152095 59152122 -61132190 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1036 493 312 82 37 chr13 59153804 59154146 -61130166 - MLT1D LTR MaLR 0 467 34 2 1036 639 239 27 54 chr13 59154992 59155146 -61129166 + B3A SINE B2 1 153 -45 2 1036 483 60 0 0 chr13 59155146 59155213 -61129099 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1036 639 239 27 54 chr13 59155213 59155244 -61129068 + B3A SINE B2 154 181 -17 2 1036 430 312 5 15 chr13 59157629 59157751 -61126561 + (TG)n Simple_repeat Simple_repeat 1 200 -196 2 1036 361 319 19 12 chr13 59157751 59157913 -61126399 + (TATG)n Simple_repeat Simple_repeat 2 164 0 2 1036 430 312 5 15 chr13 59157913 59158030 -61126282 + (TG)n Simple_repeat Simple_repeat 201 396 0 2 1036 404 253 11 22 chr13 59158031 59158209 -61126103 + (TATG)n Simple_repeat Simple_repeat 4 179 0 2 1036 23 33 0 0 chr13 59158770 59158800 -61125512 + AT_rich Low_complexity Low_complexity 1 30 0 2 1036 574 256 62 21 chr13 59158961 59159187 -61125125 + L1MA5 LINE L1 6055 6292 -8 2 1036 213 300 8 98 chr13 59159261 59159383 -61124929 + L3 LINE CR1 3707 3817 -672 2 1036 225 0 0 0 chr13 59159784 59159809 -61124503 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 1036 243 336 21 55 chr13 59160528 59160673 -61123639 - MIR3 SINE MIR -25 183 44 2 1036 477 335 118 53 chr13 59161872 59162228 -61122084 - MLT1B LTR MaLR 0 390 12 2 1036 545 145 14 51 chr13 59163315 59163453 -61120859 + Lx2B LINE L1 6868 7000 0 2 1036 1254 275 35 11 chr13 59163729 59164169 -61120143 + L1MB7 LINE L1 5289 5749 -2036 2 1036 605 305 48 87 chr13 59164467 59164593 -61119719 + L1MB7 LINE L1 5742 5859 -325 2 1036 1010 225 14 5 chr13 59164593 59164807 -61119505 + B3 SINE B2 1 216 0 2 1036 605 305 48 87 chr13 59164807 59165096 -61119216 + L1MB7 LINE L1 5860 6141 -43 2 1036 250 305 36 45 chr13 59165182 59165282 -61119030 + B3 SINE B2 104 203 -13 2 1036 395 19 0 19 chr13 59165282 59165335 -61118977 + (TAA)n Simple_repeat Simple_repeat 3 54 0 2 1036 610 250 131 0 chr13 59165432 59165608 -61118704 + B3 SINE B2 4 202 -14 2 1036 23 33 0 0 chr13 59165609 59165639 -61118673 + AT_rich Low_complexity Low_complexity 1 30 0 2 1036 1290 234 46 51 chr13 59166460 59166830 -61117482 - ORR1D2 LTR MaLR -2 368 1 2 1036 694 230 93 44 chr13 59168087 59168292 -61116020 + B3 SINE B2 1 215 -1 2 1036 264 77 0 0 chr13 59169427 59169466 -61114846 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 2 1036 236 65 0 0 chr13 59170609 59170640 -61113672 + B1_Mus1 SINE Alu 1 31 -117 2 1036 245 302 134 17 chr13 59171678 59171850 -61112462 - L1MEc LINE L1 -5483 917 726 2 1036 402 21 0 0 chr13 59172196 59172243 -61112069 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1036 388 288 93 70 chr13 59172267 59172439 -61111873 - MTEa LTR MaLR -200 179 4 2 1036 24 0 0 0 chr13 59172718 59172742 -61111570 + AT_rich Low_complexity Low_complexity 1 24 0 2 1036 398 284 121 74 chr13 59173849 59174039 -61110273 + B4 SINE B4 19 217 -75 2 1036 324 176 0 0 chr13 59174051 59174119 -61110193 + (CAG)n Simple_repeat Simple_repeat 1 68 0 2 1036 237 279 0 0 chr13 59174173 59174234 -61110078 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1036 180 0 0 0 chr13 59176764 59176784 -61107528 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1036 811 203 30 45 chr13 59176806 59177007 -61107305 - B3A SINE B2 0 198 1 2 1036 277 345 34 27 chr13 59177384 59177530 -61106782 - Charlie4a DNA MER1_type -256 252 106 2 1036 291 343 106 24 chr13 59178018 59178272 -61106040 - L3 LINE CR1 -1072 3417 3143 2 1036 332 243 52 111 chr13 59179695 59179848 -61104464 + MTEb LTR MaLR 229 372 -7 2 1036 249 33 0 0 chr13 59180218 59180248 -61104064 + (CAA)n Simple_repeat Simple_repeat 2 31 0 2 1036 275 254 0 0 chr13 59180308 59180363 -61103949 + G-rich Low_complexity Low_complexity 2 56 0 2 1036 208 244 22 0 chr13 59180932 59181022 -61103290 + CT-rich Low_complexity Low_complexity 3 94 0 2 1036 526 315 140 15 chr13 59182388 59182723 -61101589 - MLT1B LTR MaLR -8 382 6 2 1036 260 354 77 0 chr13 59183213 59183343 -61100969 + MER82 DNA MER2_type 6 145 -508 2 1036 216 0 0 0 chr13 59183382 59183406 -61100906 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1036 597 300 41 41 chr13 59183417 59183636 -61100676 + Tigger5 DNA MER2_type 7 225 -2181 2 1036 959 315 51 14 chr13 59183758 59184112 -61100200 + MER82 DNA MER2_type 259 625 -28 2 1036 1001 72 1 1 chr13 59184171 59184328 -61099984 - ORR1A4 LTR MaLR -167 160 4 2 1036 252 0 0 0 chr13 59184382 59184410 -61099902 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 2 1036 24 0 0 0 chr13 59184592 59184616 -61099696 + GC_rich Low_complexity Low_complexity 1 24 0 2 1036 252 143 0 0 chr13 59186449 59186491 -61097821 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 2 1036 363 248 97 0 chr13 59186553 59186666 -61097646 - MER5A DNA MER1_type 0 189 66 2 1036 693 36 0 0 chr13 59187141 59187225 -61097087 + (GGAA)n Simple_repeat Simple_repeat 4 87 0 2 1036 248 97 97 0 chr13 59187236 59187308 -61097004 + (CAGAGA)n Simple_repeat Simple_repeat 6 84 0 2 1036 321 89 0 0 chr13 59189537 59189582 -61094730 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1036 2527 135 102 9 chr13 59189927 59190196 -61094116 - RMER15 LTR ERVL -92 483 195 2 1036 222 62 0 0 chr13 59190196 59190228 -61094084 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2 1036 2527 135 102 9 chr13 59190228 59190275 -61094037 - RMER15 LTR ERVL -381 194 136 2 1036 183 42 0 0 chr13 59190275 59190299 -61094013 + (TGG)n Simple_repeat Simple_repeat 1 24 0 2 1036 2527 135 102 9 chr13 59190299 59190423 -61093889 - RMER15 LTR ERVL -440 135 2 2 1036 225 255 61 50 chr13 59190474 59190573 -61093739 - LTR40a LTR ERVL -127 392 293 2 1036 239 318 89 22 chr13 59191945 59192035 -61092277 - MLT1A0 LTR MaLR -244 121 26 2 1036 423 0 0 0 chr13 59193324 59193371 -61090941 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1036 312 286 190 14 chr13 59195117 59195259 -61089053 + L2c LINE L2 2938 3104 -283 2 1036 189 0 0 0 chr13 59195264 59195285 -61089027 + (TTG)n Simple_repeat Simple_repeat 2 22 0 2 1036 24 32 0 0 chr13 59195547 59195578 -61088734 + AT_rich Low_complexity Low_complexity 1 31 0 2 1036 254 338 125 7 chr13 59196920 59197072 -61087240 + MIRb SINE MIR 68 237 -31 2 1036 945 224 39 10 chr13 59197702 59197909 -61086403 + B3 SINE B2 4 216 0 2 1036 832 247 21 21 chr13 59200715 59200909 -61083403 + B3 SINE B2 10 203 -13 2 1036 2240 176 56 105 chr13 59201236 59201806 -61082506 - RMER1A Other Other -6 1024 313 2 1036 580 276 61 6 chr13 59201805 59201969 -61082343 - L1MC LINE L1 -604 5740 5568 2 1036 692 92 8 0 chr13 59202142 59202261 -61082051 + (TCTA)n Simple_repeat Simple_repeat 3 122 0 2 1036 513 0 0 0 chr13 59202262 59202319 -61081993 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1036 38572 30 0 0 chr13 59202849 59209312 -61075000 - L1Md_T LINE L1 0 6585 26 2 1036 254 208 0 36 chr13 59209407 59209462 -61074850 + B3 SINE B2 145 197 -19 2 1036 862 284 73 47 chr13 59209690 59210030 -61074282 + ORR1E LTR MaLR 3 351 -8 2 1036 3313 64 0 2 chr13 59210320 59210728 -61073584 - MTB_Mm LTR MaLR 0 407 1 2 1036 244 288 137 0 chr13 59210937 59211010 -61073302 + ID4_ SINE ID 1 83 0 2 1036 477 0 0 0 chr13 59211294 59211347 -61072965 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1036 1402 176 90 118 chr13 59212149 59212515 -61071797 - ORR1B2 LTR MaLR -8 359 4 2 1036 1941 136 19 71 chr13 59213125 59213490 -61070822 - ORR1A1 LTR MaLR 0 346 1 2 1036 608 287 6 23 chr13 59213545 59213716 -61070596 - Lx8 LINE L1 -181 7292 7125 2 1036 372 299 65 92 chr13 59214127 59214512 -61069800 - ORR1E LTR MaLR -4 370 1 3 1036 258 32 0 0 chr13 59215174 59215205 -61069107 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1036 1001 229 98 36 chr13 59215640 59215916 -61068396 + MTD LTR MaLR 125 417 -2 3 1036 811 233 19 25 chr13 59216173 59216371 -61067941 - B3 SINE B2 -11 182 2 3 1036 261 197 0 0 chr13 59218373 59218434 -61065878 + (TG)n Simple_repeat Simple_repeat 1 61 0 3 1036 1132 215 9 5 chr13 59218676 59218891 -61065421 + B3 SINE B2 1 216 0 3 1036 23 54 0 0 chr13 59218944 59218981 -61065331 + AT_rich Low_complexity Low_complexity 1 37 0 3 1036 189 74 0 0 chr13 59218984 59219011 -61065301 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1036 1108 112 0 0 chr13 59219012 59219172 -61065140 - B2_Mm2 SINE B2 -34 161 2 3 1036 316 216 162 39 chr13 59219178 59219332 -61064980 - L1MD LINE L1 -2900 3246 3074 3 1036 207 0 0 0 chr13 59219891 59219914 -61064398 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1036 238 179 54 0 chr13 59221868 59221924 -61062388 + MER103 DNA DNA 63 121 -45 3 1036 3097 88 25 35 chr13 59222845 59223325 -61060987 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1036 14923 54 12 1 chr13 59223327 59225131 -61059181 - IAPEz-int LTR ERVK -2 6479 4656 3 1036 1909 86 4 0 chr13 59225130 59225375 -61058937 - IAPEz-int LTR ERVK -5183 2497 2252 3 1036 973 59 0 0 chr13 59225376 59225495 -61058817 - IAPEz-int LTR ERVK -5004 1477 1359 3 1036 3326 69 28 16 chr13 59225495 59226058 -61058254 - IAPEz-int LTR ERVK -5819 662 168 3 1036 234 327 0 0 chr13 59226058 59226113 -61058199 - RLTR27 LTR ERVK -34 275 221 3 1036 1225 60 15 94 chr13 59226113 59226314 -61057998 - IAPEz-int LTR ERVK -6288 193 9 3 1036 2997 90 64 22 chr13 59226315 59226771 -61057541 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1036 183 80 0 0 chr13 59227294 59227319 -61056993 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1036 188 283 22 0 chr13 59227413 59227459 -61056853 + MIRb SINE MIR 124 170 -98 3 1036 396 0 0 0 chr13 59228000 59228044 -61056268 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1036 760 316 65 44 chr13 59228451 59228772 -61055540 - MER2 DNA MER2_type -15 330 3 3 1036 238 273 0 0 chr13 59229297 59229352 -61054960 + L1MA6 LINE L1 6171 6225 -75 3 1036 197 33 33 0 chr13 59230250 59230280 -61054032 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3 1036 217 217 0 0 chr13 59230369 59230415 -61053897 + GA-rich Low_complexity Low_complexity 1 46 0 3 1036 332 62 46 15 chr13 59232278 59232343 -61051969 + (GA)n Simple_repeat Simple_repeat 2 68 0 3 1036 224 59 0 29 chr13 59232427 59232462 -61051850 + (TTA)n Simple_repeat Simple_repeat 1 34 0 3 1036 244 283 19 19 chr13 59233107 59233215 -61051097 + (TA)n Simple_repeat Simple_repeat 1 108 0 3 1036 351 96 0 0 chr13 59234312 59234364 -61049948 + (TTTA)n Simple_repeat Simple_repeat 4 55 0 3 1036 1144 59 0 0 chr13 59235531 59235666 -61048646 - B1_Mus2 SINE Alu -11 136 2 3 1036 407 308 75 7 chr13 59235729 59235876 -61048436 + MER3 DNA MER1_type 46 202 -7 3 1036 228 186 80 67 chr13 59236259 59236334 -61047978 + LTRIS3 LTR ERV1 85 160 -352 3 1036 511 325 10 50 chr13 59236610 59236808 -61047504 - MLT1C LTR MaLR 0 467 278 3 1036 1481 53 32 5 chr13 59238684 59238874 -61045438 + B2_Mm2 SINE B2 1 195 0 3 1036 23 0 0 0 chr13 59239262 59239285 -61045027 + AT_rich Low_complexity Low_complexity 1 23 0 3 1036 288 325 42 8 chr13 59239285 59239403 -61044909 - HAL1 LINE L1 -883 1624 1503 3 1036 303 85 0 0 chr13 59239421 59239468 -61044844 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1036 1072 101 12 0 chr13 59239481 59239650 -61044662 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 3 1036 369 0 0 0 chr13 59239714 59239755 -61044557 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 3 1036 24 32 0 0 chr13 59239844 59239875 -61044437 + AT_rich Low_complexity Low_complexity 1 31 0 3 1036 307 313 40 99 chr13 59240059 59240282 -61044030 + L1M5 LINE L1 2247 2456 -3759 3 1036 315 0 0 0 chr13 59241485 59241520 -61042792 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1036 402 69 0 0 chr13 59241563 59241621 -61042691 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 1036 1362 284 90 87 chr13 59241625 59241660 -61042652 - Lx9 LINE L1 -232 7412 7382 3 1036 4058 164 53 4 chr13 59241660 59242126 -61042186 - RMER19A LTR ERVK 0 737 266 3 1036 252 0 0 0 chr13 59242126 59242154 -61042158 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1036 4058 164 53 4 chr13 59242154 59242390 -61041922 - RMER19A LTR ERVK -472 265 2 3 1036 1362 284 90 87 chr13 59242390 59243091 -61041221 - Lx9 LINE L1 -263 7381 6674 3 1036 3189 46 1 6 chr13 59244026 59244428 -61039884 + MTB_Mm LTR MaLR 1 391 -16 3 1037 180 338 0 66 chr13 59245027 59245103 -61039209 + L2 LINE L2 262 332 -3087 3 1037 417 81 0 0 chr13 59245205 59245267 -61039045 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1037 183 80 0 0 chr13 59245318 59245343 -61038969 + (TAAAA)n Simple_repeat Simple_repeat 4 28 0 3 1037 195 351 41 41 chr13 59245562 59245660 -61038652 + L3 LINE CR1 4344 4441 -48 3 1037 204 310 71 12 chr13 59249052 59249137 -61035175 - MIR3 SINE MIR -116 92 3 3 1037 404 308 83 29 chr13 59249974 59250177 -61034135 - L1MC3 LINE L1 -916 6869 6649 3 1037 342 0 0 0 chr13 59250177 59250215 -61034097 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1037 694 302 37 62 chr13 59250215 59250569 -61033743 - L1MC3 LINE L1 -1137 6648 6264 3 1037 229 358 75 69 chr13 59250575 59250734 -61033578 + LTR41 LTR ERVL 32 191 -577 3 1037 1060 96 76 23 chr13 59250857 59250888 -61033424 - B2_Mm2 SINE B2 -14 181 154 3 1037 441 0 0 0 chr13 59250888 59250937 -61033375 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1037 1060 96 76 23 chr13 59250937 59251076 -61033236 - B2_Mm2 SINE B2 -42 153 2 3 1037 2492 289 170 26 chr13 59251077 59251576 -61032736 + MER45R DNA Tip100 94 701 -880 3 1037 270 0 0 0 chr13 59251576 59251606 -61032706 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1037 225 0 0 0 chr13 59251606 59251630 -61032682 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1037 2492 289 170 26 chr13 59251630 59252296 -61032016 + MER45R DNA Tip100 702 1427 -154 3 1037 1639 121 22 14 chr13 59252554 59252831 -61031481 + RMER6A LTR ERVK 121 399 -357 3 1037 467 137 0 14 chr13 59252816 59252890 -61031422 - RMER6B LTR ERVK -388 73 1 3 1037 296 289 40 40 chr13 59253308 59253409 -61030903 + MLT1F2 LTR MaLR 49 149 -411 3 1037 374 0 22 0 chr13 59253969 59254015 -61030297 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1037 463 242 52 14 chr13 59254082 59254229 -61030083 - MTE2a LTR MaLR -210 169 12 3 1037 24 32 0 0 chr13 59254706 59254737 -61029575 + AT_rich Low_complexity Low_complexity 1 31 0 3 1037 28 48 0 0 chr13 59255073 59255115 -61029197 + AT_rich Low_complexity Low_complexity 1 42 0 3 1037 295 304 80 9 chr13 59255986 59256099 -61028213 + MIRb SINE MIR 116 236 -32 3 1037 195 290 32 0 chr13 59256151 59256213 -61028099 + L2a LINE L2 3358 3421 -5 3 1037 262 291 26 60 chr13 59256327 59256444 -61027868 + L1M5 LINE L1 5524 5636 -528 3 1037 247 277 160 74 chr13 59256489 59256803 -61027509 - ORR1D1 LTR MaLR -14 365 19 3 1037 267 31 0 0 chr13 59257054 59257086 -61027226 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1037 269 295 90 54 chr13 59257093 59257204 -61027108 - MIRc SINE MIR -141 127 13 3 1037 410 204 20 51 chr13 59257378 59257476 -61026836 + MTC-int LTR MaLR 1163 1257 -1 3 1037 2438 141 45 5 chr13 59257477 59257877 -61026435 + MTC LTR MaLR 1 416 -5 3 1037 257 27 54 0 chr13 59259148 59259185 -61025127 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1037 240 200 22 0 chr13 59259197 59259242 -61025070 - PB1D7 SINE Alu -9 111 66 3 1037 266 174 323 106 chr13 59259251 59259412 -61024900 - B3A SINE B2 -1 197 2 3 1037 423 0 0 0 chr13 59261395 59261442 -61022870 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1037 367 314 81 29 chr13 59261447 59261657 -61022655 - Lx9 LINE L1 -339 7305 7085 3 1037 227 303 188 35 chr13 59261628 59261830 -61022482 - RMER1C Other Other -670 672 440 3 1037 192 40 0 0 chr13 59262811 59262836 -61021476 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1037 605 208 312 3 chr13 59263603 59263888 -61020424 + ORR1D1 LTR MaLR 1 374 0 3 1037 925 264 5 40 chr13 59263888 59264089 -61020223 - B3 SINE B2 -22 194 1 3 1037 669 259 34 11 chr13 59265908 59266084 -61018228 + B4A SINE B4 16 195 -97 3 1037 612 231 0 0 chr13 59267215 59267371 -61016941 + (TG)n Simple_repeat Simple_repeat 1 156 0 3 1037 244 217 199 58 chr13 59268450 59268641 -61015671 + RMER12 LTR ERVK 748 965 -357 3 1037 451 312 26 161 chr13 59269072 59269377 -61014935 - RLTR18B LTR ERVK -248 264 1 3 1037 584 314 94 27 chr13 59270263 59270591 -61013721 + MLT1A0 LTR MaLR 1 350 -15 3 1037 261 315 10 42 chr13 59271541 59271637 -61012675 - L2a LINE L2 -1 3425 3333 3 1037 276 235 42 56 chr13 59271709 59271781 -61012531 - MER58B DNA MER1_type -37 304 234 3 1037 1267 234 104 12 chr13 59272118 59272455 -61011857 + ORR1D2 LTR MaLR 1 368 -2 3 1037 362 302 0 51 chr13 59272882 59273039 -61011273 + B1F SINE Alu 1 149 0 3 1037 219 240 20 0 chr13 59273044 59273094 -61011218 + ID4 SINE ID 14 64 -19 3 1037 329 0 24 0 chr13 59273155 59273196 -61011116 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1037 813 213 24 12 chr13 59273200 59273366 -61010946 - B3 SINE B2 -29 187 20 3 1037 450 398 55 16 chr13 59273718 59273971 -61010341 - MIR SINE MIR -4 264 1 3 1037 308 305 9 19 chr13 59274765 59274872 -61009440 - PB1D10 SINE Alu -1 116 11 3 1037 376 328 81 15 chr13 59275076 59275212 -61009100 + B1_Mur2 SINE Alu 2 146 -3 3 1037 281 135 19 0 chr13 59275642 59275694 -61008618 + A-rich Low_complexity Low_complexity 3 55 0 3 1037 1091 259 58 46 chr13 59276319 59276647 -61007665 + MTEa LTR MaLR 41 372 -7 3 1037 218 32 0 31 chr13 59276658 59276690 -61007622 + (GGGAGA)n Simple_repeat Simple_repeat 4 34 0 3 1037 233 258 52 73 chr13 59276957 59277053 -61007259 - MamGypLTR1c LTR Gypsy 0 803 710 3 1037 189 0 0 0 chr13 59277056 59277077 -61007235 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 1037 236 275 0 0 chr13 59277088 59277157 -61007155 + L1M3 LINE L1 5561 5629 -554 4 1037 235 286 102 0 chr13 59278165 59278263 -61006049 - L1MEg LINE L1 -739 5425 5318 4 1037 705 269 32 17 chr13 59278544 59278731 -61005581 - L1MEg LINE L1 -1126 5014 4826 4 1037 208 247 22 33 chr13 59279374 59279466 -61004846 + (TATATG)n Simple_repeat Simple_repeat 3 93 0 4 1037 3053 71 0 51 chr13 59279494 59279923 -61004389 - MTB_Mm LTR MaLR 0 407 1 4 1037 1535 201 33 90 chr13 59279928 59280110 -61004202 + ORR1B2 LTR MaLR 1 153 -214 4 1037 459 0 0 0 chr13 59280110 59280161 -61004151 + (TC)n Simple_repeat Simple_repeat 2 52 0 4 1037 1535 201 33 90 chr13 59280161 59280367 -61003945 + ORR1B2 LTR MaLR 154 367 0 4 1037 552 309 75 29 chr13 59281794 59282168 -61002144 - L1MEg LINE L1 -1842 4304 3914 4 1037 897 279 111 24 chr13 59282254 59282625 -61001687 - L1MEg LINE L1 -2387 3759 3357 4 1037 306 67 0 0 chr13 59283919 59283964 -61000348 + (A)n Simple_repeat Simple_repeat 1 45 0 4 1037 305 321 49 35 chr13 59284144 59284286 -61000026 - L1MEg LINE L1 -4688 1554 1411 4 1037 405 225 15 15 chr13 59284367 59284498 -60999814 + CT-rich Low_complexity Low_complexity 4 134 0 4 1037 361 182 26 126 chr13 59284666 59284780 -60999532 - MER2 DNA MER2_type -48 297 188 4 1037 1346 44 65 27 chr13 59284780 59284966 -60999346 - B2_Mm2 SINE B2 -2 193 1 4 1037 361 182 26 126 chr13 59284966 59285002 -60999310 - MER2 DNA MER2_type -158 187 162 4 1037 708 182 0 0 chr13 59285087 59285224 -60999088 + CT-rich Low_complexity Low_complexity 3 139 0 4 1037 260 245 84 21 chr13 59285232 59285374 -60998938 - L1MDa LINE L1 -1214 5323 5173 4 1037 1945 187 19 105 chr13 59285439 59285971 -60998341 - RMER19C LTR ERVK 0 611 126 4 1037 376 225 181 3 chr13 59286185 59286309 -60998003 - B1_Mus2 SINE Alu -6 143 1 4 1037 305 258 139 49 chr13 59286504 59286737 -60997575 - L1MDa LINE L1 -1949 4588 4332 4 1037 1517 292 89 51 chr13 59286757 59287060 -60997252 + L1_Mur3 LINE L1 4121 4414 -1466 4 1037 1360 214 157 8 chr13 59287060 59287423 -60996889 - MTD LTR MaLR -2 417 1 4 1037 1517 292 89 51 chr13 59287423 59287959 -60996353 + L1_Mur3 LINE L1 4415 4992 -888 4 1037 582 307 50 23 chr13 59288066 59288463 -60995849 - L1MDa LINE L1 -4080 2553 2146 4 1037 302 295 75 78 chr13 59289066 59289117 -60995195 - L1MDa LINE L1 -5223 1317 1276 4 1037 2697 53 12 0 chr13 59289117 59289440 -60994872 - ORR1A2 LTR MaLR 0 327 1 4 1037 302 295 75 78 chr13 59289440 59289719 -60994593 - L1MDa LINE L1 -5265 1275 988 4 1037 264 53 0 81 chr13 59291038 59291100 -60993212 + (TTTTTG)n Simple_repeat Simple_repeat 2 58 0 4 1037 260 301 78 42 chr13 59291369 59291399 -60992913 - B1_Mm SINE Alu 0 147 118 4 1037 354 45 0 0 chr13 59291399 59291443 -60992869 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1037 316 228 93 56 chr13 59291443 59291550 -60992762 - ID_B1 SINE B4 -28 196 86 4 1037 198 0 0 0 chr13 59292367 59292389 -60991923 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1037 429 20 0 0 chr13 59292389 59292438 -60991874 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1037 255 239 0 0 chr13 59292439 59292569 -60991743 + (TG)n Simple_repeat Simple_repeat 1 130 0 4 1037 516 195 0 0 chr13 59292607 59292756 -60991556 + (TG)n Simple_repeat Simple_repeat 2 150 0 4 1037 246 222 0 0 chr13 59292769 59292859 -60991453 + (TG)n Simple_repeat Simple_repeat 1 90 0 4 1037 444 245 140 0 chr13 59292859 59293002 -60991310 - RSINE1 SINE B4 0 165 3 4 1037 245 276 118 12 chr13 59293109 59293278 -60991034 + L2 LINE L2 2665 2851 -568 4 1037 198 128 0 0 chr13 59295148 59295187 -60989125 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 4 1037 820 289 7 9 chr13 59295758 59296044 -60988268 + L1_Mur3 LINE L1 4410 4685 -1195 4 1037 210 37 0 0 chr13 59296698 59296725 -60987587 + (TTG)n Simple_repeat Simple_repeat 2 28 0 4 1037 253 136 117 17 chr13 59296866 59296926 -60987386 - MER31A LTR ERV1 0 485 420 4 1037 651 285 68 75 chr13 59297106 59297531 -60986781 + MER31A LTR ERV1 3 424 -61 4 1037 366 269 58 8 chr13 59297711 59297831 -60986481 + MER5A1 DNA MER1_type 37 162 -4 4 1037 692 251 51 55 chr13 59297988 59298262 -60986050 - B4 SINE B4 -18 274 2 4 1037 630 0 0 0 chr13 59299484 59299554 -60984758 + (TTC)n Simple_repeat Simple_repeat 1 70 0 4 1037 6426 83 24 7 chr13 59299556 59300433 -60983879 - L1_Mus4 LINE L1 -7 6629 5738 4 1037 907 59 29 14 chr13 59300433 59300571 -60983741 - L1_Mur2 LINE L1 -501 5376 5237 4 1037 6318 140 8 1 chr13 59300570 59301573 -60982739 + L1_Mm LINE L1 4267 5276 -607 4 1037 305 271 48 122 chr13 59306955 59307102 -60977210 + MTEb LTR MaLR 1 136 -243 4 1037 746 149 0 7 chr13 59307181 59307330 -60976982 + CT-rich Low_complexity Low_complexity 4 151 0 4 1037 199 55 73 18 chr13 59308190 59308245 -60976067 + (TATAA)n Simple_repeat Simple_repeat 3 60 0 4 1037 219 262 141 16 chr13 59308463 59308591 -60975721 - L2a LINE L2 -374 3045 2902 4 1037 378 0 0 0 chr13 59308883 59308925 -60975387 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 1037 466 224 9 18 chr13 59309165 59309274 -60975038 + (CA)n Simple_repeat Simple_repeat 1 108 0 4 1037 349 241 23 29 chr13 59309282 59309457 -60974855 + (CATA)n Simple_repeat Simple_repeat 1 174 0 4 1037 224 30 30 0 chr13 59309566 59309599 -60974713 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1037 2673 13 3 0 chr13 59309602 59309905 -60974407 - L1Md_A LINE L1 -1 6581 6278 4 1037 182 83 56 0 chr13 59310375 59310411 -60973901 + (TGGGGG)n Simple_repeat Simple_repeat 2 39 0 4 1037 567 152 5 48 chr13 59310540 59310727 -60973585 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1037 1253 164 9 9 chr13 59312295 59312511 -60971801 + B3 SINE B2 1 216 0 4 1037 242 257 57 2 chr13 59315207 59315304 -60969008 + L1MC1 LINE L1 5289 5388 -758 4 1037 1242 321 63 22 chr13 59315626 59316273 -60968039 + L1MC1 LINE L1 5623 6296 -37 4 1037 185 364 40 10 chr13 59316967 59317067 -60967245 + MIRm SINE MIR 49 151 -125 4 1037 281 217 108 0 chr13 59317198 59317281 -60967031 - Lx7 LINE L1 0 7696 7605 4 1037 198 128 0 0 chr13 59317352 59317391 -60966921 + (CAGAGA)n Simple_repeat Simple_repeat 4 42 0 4 1037 2553 235 44 35 chr13 59317401 59318085 -60966227 - Lx7 LINE L1 -280 7416 6727 4 1037 485 126 0 0 chr13 59318514 59318619 -60965693 + ORR1A1 LTR MaLR 1 105 -241 4 1037 1763 114 10 14 chr13 59318639 59318932 -60965380 + ORR1A2 LTR MaLR 28 319 -8 4 1037 830 148 0 12 chr13 59319551 59319791 -60964521 + GA-rich Low_complexity Low_complexity 1 237 0 4 1037 517 42 69 0 chr13 59322607 59322679 -60961633 - MTB_Mm LTR MaLR -330 77 1 4 1037 191 351 78 13 chr13 59322701 59322854 -60961458 - MIR SINE MIR -68 194 32 4 1037 1106 209 24 5 chr13 59322994 59323206 -60961106 + B3 SINE B2 1 216 0 4 1037 22 0 0 0 chr13 59323675 59323697 -60960615 + AT_rich Low_complexity Low_complexity 1 22 0 4 1037 7886 69 9 2 chr13 59323814 59325340 -60958972 - L1_Mus1 LINE L1 0 6567 5032 4 1037 1071 194 28 5 chr13 59325338 59325555 -60958757 + L1Md_F LINE L1 283 504 -6015 4 1037 22 0 0 0 chr13 59325958 59325980 -60958332 + AT_rich Low_complexity Low_complexity 1 22 0 4 1037 414 143 0 0 chr13 59326698 59326789 -60957523 + (TC)n Simple_repeat Simple_repeat 2 92 0 4 1037 423 0 0 0 chr13 59326789 59326836 -60957476 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1037 584 193 8 48 chr13 59326991 59327116 -60957196 + B1_Mur4 SINE Alu 18 137 -13 4 1037 206 120 63 22 chr13 59327807 59327867 -60956445 + MIR SINE MIR 213 273 -3 4 1037 249 282 56 0 chr13 59328521 59328592 -60955720 - ID2 SINE ID -8 75 1 4 1037 297 0 0 0 chr13 59328625 59328658 -60955654 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 4 1037 249 321 115 9 chr13 59328668 59328885 -60955427 - L1MB7 LINE L1 -96 6088 5849 4 1037 290 345 50 0 chr13 59328969 59329108 -60955204 - L1MB7 LINE L1 -455 5719 5574 4 1037 459 0 0 0 chr13 59330294 59330345 -60953967 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1037 226 316 90 90 chr13 59330394 59330582 -60953730 + MLT1A1 LTR MaLR 25 212 -196 4 1037 1219 102 26 11 chr13 59330929 59330955 -60953357 - B2_Mm1t SINE B2 0 193 165 4 1037 216 0 0 0 chr13 59330955 59330979 -60953333 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 4 1037 1219 102 26 11 chr13 59330979 59331141 -60953171 - B2_Mm1t SINE B2 -29 164 2 4 1037 630 250 77 0 chr13 59331317 59331513 -60952799 + B3 SINE B2 1 211 -5 4 1037 237 324 65 72 chr13 59332346 59332499 -60951813 + L2b LINE L2 3222 3373 -2 4 1037 681 13 0 0 chr13 59333459 59333537 -60950775 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1037 1274 52 0 0 chr13 59333543 59333698 -60950614 + B2_Mm2 SINE B2 2 156 -39 4 1037 890 277 62 0 chr13 59333712 59333954 -60950358 + B4A SINE B4 34 290 -2 4 1037 1361 156 119 13 chr13 59334018 59334255 -60950057 + RLTR20B3 LTR ERVK 73 482 -95 4 1037 573 76 0 0 chr13 59334255 59334334 -60949978 + (TG)n Simple_repeat Simple_repeat 2 80 0 4 1037 1361 162 100 8 chr13 59334334 59334405 -60949907 + RLTR20B3 LTR ERVK 483 567 -10 4 1037 315 0 0 0 chr13 59334406 59334441 -60949871 + (CTA)n Simple_repeat Simple_repeat 3 37 0 4 1037 285 128 0 0 chr13 59334441 59334488 -60949824 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1037 226 197 25 50 chr13 59334608 59334688 -60949624 + (GGCTG)n Simple_repeat Simple_repeat 3 80 0 4 1037 284 0 28 0 chr13 59334792 59334828 -60949484 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 1037 297 312 0 0 chr13 59334929 59335070 -60949242 + (CCTA)n Simple_repeat Simple_repeat 2 142 0 4 1037 582 203 0 0 chr13 59335048 59335181 -60949131 + (TCTA)n Simple_repeat Simple_repeat 3 135 0 4 1037 1005 251 88 20 chr13 59335181 59335486 -60948826 - Lx8 LINE L1 -113 7360 7035 4 1037 618 141 0 0 chr13 59335501 59335643 -60948669 + (TC)n Simple_repeat Simple_repeat 2 143 0 4 1037 892 270 92 10 chr13 59335649 59335941 -60948371 - Lx8 LINE L1 -452 7021 6706 4 1037 2357 178 47 2 chr13 59335954 59336376 -60947936 - RMER4A LTR ERVK 0 466 26 4 1037 600 340 19 0 chr13 59336379 59336588 -60947724 - Lx8 LINE L1 -877 6596 6384 4 1037 2146 142 93 0 chr13 59336632 59336985 -60947327 + ORR1B1 LTR MaLR 1 386 -8 4 1037 683 192 6 0 chr13 59338798 59338975 -60945337 + GA-rich Low_complexity Low_complexity 1 178 0 4 1037 195 42 0 0 chr13 59339391 59339415 -60944897 + (CTTTG)n Simple_repeat Simple_repeat 1 24 0 4 1037 189 94 0 0 chr13 59339430 59339462 -60944850 + (T)n Simple_repeat Simple_repeat 1 32 0 4 1037 467 194 34 14 chr13 59340062 59340208 -60944104 + CT-rich Low_complexity Low_complexity 1 149 0 4 1037 1249 54 0 0 chr13 59341136 59341284 -60943028 - B1_Mus1 SINE Alu 0 148 1 4 1037 293 232 0 42 chr13 59341415 59341487 -60942825 + G-rich Low_complexity Low_complexity 2 70 0 4 1037 989 17 0 8 chr13 59341488 59341608 -60942704 + (GGGAGA)n Simple_repeat Simple_repeat 2 120 0 4 1037 230 261 147 9 chr13 59342035 59342151 -60942161 - LTR37B LTR ERV1 -62 406 275 4 1037 311 293 37 0 chr13 59342466 59342548 -60941764 + MER97c DNA MER1_type? 41 125 -965 4 1037 453 116 0 0 chr13 59342571 59342640 -60941672 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 1037 366 217 14 0 chr13 59342640 59342709 -60941603 - ID4 SINE ID -6 77 8 5 1037 321 246 0 0 chr13 59342803 59342921 -60941391 + (CA)n Simple_repeat Simple_repeat 2 119 0 5 1037 351 290 3 0 chr13 59342934 59343253 -60941059 + (CA)n Simple_repeat Simple_repeat 1 319 0 5 1037 1252 214 162 11 chr13 59344047 59344411 -60939901 - MTD LTR MaLR 0 419 1 5 1037 223 339 71 0 chr13 59344430 59344557 -60939755 - L2b LINE L2 0 3375 3240 5 1037 246 321 47 0 chr13 59344561 59344667 -60939645 + PB1D7 SINE Alu 2 112 -8 5 1037 249 128 0 0 chr13 59345370 59345417 -60938895 + (TATG)n Simple_repeat Simple_repeat 1 47 0 5 1037 1092 117 0 0 chr13 59345427 59345644 -60938668 + (TGGA)n Simple_repeat Simple_repeat 1 217 0 5 1037 1026 267 39 11 chr13 59345924 59346208 -60938104 - B4A SINE B4 0 292 1 5 1037 435 242 6 11 chr13 59347993 59348173 -60936139 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1037 279 264 0 0 chr13 59348238 59348367 -60935945 + (TATG)n Simple_repeat Simple_repeat 2 130 0 5 1037 517 252 96 38 chr13 59349082 59349339 -60934973 - MLT1B LTR MaLR -6 384 80 5 1037 471 301 27 49 chr13 59350650 59350810 -60933502 + B3A SINE B2 2 160 -38 5 1037 969 150 0 0 chr13 59350810 59350990 -60933322 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1037 471 301 27 49 chr13 59350990 59351014 -60933298 + B3A SINE B2 161 182 -16 5 1037 462 157 0 0 chr13 59351014 59351097 -60933215 + (CA)n Simple_repeat Simple_repeat 1 83 0 5 1037 726 303 92 32 chr13 59352074 59352290 -60932022 + Lx8 LINE L1 7113 7345 -128 5 1037 287 45 45 0 chr13 59352290 59352334 -60931978 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 5 1037 726 303 92 32 chr13 59352334 59352455 -60931857 + Lx8 LINE L1 7346 7469 -4 5 1037 294 314 20 0 chr13 59352524 59352626 -60931686 + GA-rich Low_complexity Low_complexity 2 105 0 5 1037 257 353 97 17 chr13 59353268 59353444 -60930868 + MIRm SINE MIR 71 260 -16 5 1037 333 279 0 38 chr13 59354018 59354204 -60930108 + (CCTG)n Simple_repeat Simple_repeat 1 179 0 5 1037 242 346 0 27 chr13 59354130 59354314 -60929998 + CT-rich Low_complexity Low_complexity 2 180 0 5 1037 353 263 0 44 chr13 59354268 59354451 -60929861 + (CCTG)n Simple_repeat Simple_repeat 1 175 0 5 1037 351 263 50 50 chr13 59357550 59357670 -60926642 + LTR37B LTR ERV1 106 225 -243 5 1037 258 283 78 73 chr13 59357778 59357957 -60926355 + LTR37B LTR ERV1 289 468 0 5 1037 381 95 0 0 chr13 59358060 59358123 -60926189 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1037 317 207 54 54 chr13 59358123 59358215 -60926097 - MLT1A1 LTR MaLR -8 400 309 5 1037 295 260 90 121 chr13 59358235 59358401 -60925911 - MLT1A1 LTR MaLR -218 190 30 5 1037 2036 348 107 70 chr13 59358412 59359978 -60924334 - MLT1A1-int LTR MaLR 0 1735 113 5 1037 1327 218 33 11 chr13 59360847 59361121 -60923191 - MTD LTR MaLR -14 405 126 5 1037 2600 165 13 60 chr13 59361126 59361860 -60922452 + L1_Mur3 LINE L1 2708 3334 -580 5 1037 541 158 20 0 chr13 59361864 59361965 -60922347 - L1_Mur2 LINE L1 -2138 3739 3637 5 1037 962 97 7 0 chr13 59361974 59362118 -60922194 + (GGAA)n Simple_repeat Simple_repeat 3 147 0 5 1037 397 277 149 39 chr13 59362288 59362539 -60921773 + Lx8 LINE L1 6930 7245 -228 5 1037 26 0 0 0 chr13 59362679 59362705 -60921607 + AT_rich Low_complexity Low_complexity 1 26 0 5 1037 710 188 6 0 chr13 59363679 59363844 -60920468 + (CA)n Simple_repeat Simple_repeat 1 166 0 5 1037 517 267 8 0 chr13 59363876 59363996 -60920316 - MTEa LTR MaLR -58 321 201 5 1037 654 269 0 45 chr13 59364061 59364196 -60920116 + B1_Mur1 SINE Alu 1 132 -17 5 1037 334 0 21 21 chr13 59364196 59364243 -60920069 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 5 1037 654 269 0 45 chr13 59364243 59364263 -60920049 + B1_Mur1 SINE Alu 133 149 0 5 1037 241 279 139 0 chr13 59364292 59364378 -60919934 + MER103 DNA DNA 24 121 -45 5 1037 291 349 181 44 chr13 59364557 59365130 -60919182 + L2 LINE L2 2327 2978 -441 5 1037 569 14 14 0 chr13 59365451 59365521 -60918791 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 1037 399 278 79 18 chr13 59366313 59366478 -60917834 + MLT1A0 LTR MaLR 179 353 -12 5 1037 219 220 0 0 chr13 59366483 59366533 -60917779 + (CAT)n Simple_repeat Simple_repeat 3 52 0 5 1037 255 298 61 50 chr13 59366651 59366750 -60917562 + Charlie7 DNA MER1_type 460 559 -2053 5 1037 23 0 0 0 chr13 59366874 59366897 -60917415 + AT_rich Low_complexity Low_complexity 1 23 0 5 1037 1198 54 0 7 chr13 59366989 59367138 -60917174 + B1_Mus1 SINE Alu 1 148 0 5 1037 249 83 0 0 chr13 59367138 59367174 -60917138 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 5 1037 283 241 89 10 chr13 59367778 59367893 -60916419 + MLT1B LTR MaLR 237 366 -8 5 1037 267 222 78 16 chr13 59368467 59368531 -60915781 + ID SINE ID 2 69 -155 5 1037 2650 62 12 0 chr13 59368768 59369091 -60915221 + ORR1A2 LTR MaLR 1 327 0 5 1037 294 309 104 104 chr13 59369684 59369728 -60914584 - MLT1D LTR MaLR -301 204 178 5 1037 649 242 198 112 chr13 59369728 59370067 -60914245 - ORR1D2 LTR MaLR 0 370 3 5 1037 294 309 104 104 chr13 59370067 59370224 -60914088 - MLT1D LTR MaLR -328 177 3 5 1037 180 0 0 0 chr13 59371461 59371481 -60912831 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 1037 855 251 124 52 chr13 59371926 59372274 -60912038 - RMER5 LTR ERV1 -3 531 159 5 1037 469 291 28 21 chr13 59372351 59372495 -60911817 + Tigger5 DNA MER2_type 70 214 -2192 5 1037 259 275 14 0 chr13 59372523 59372592 -60911720 + Tigger5 DNA MER2_type 2337 2406 0 5 1037 461 105 0 11 chr13 59373769 59373856 -60910456 + (TC)n Simple_repeat Simple_repeat 2 87 0 5 1037 618 297 68 30 chr13 59374722 59374958 -60909354 - MER2 DNA MER2_type 0 345 101 5 1037 764 127 24 39 chr13 59375151 59375493 -60908819 + GA-rich Low_complexity Low_complexity 1 336 0 5 1038 216 189 0 0 chr13 59376989 59377026 -60907286 + ID4 SINE ID 2 38 -45 5 1038 2706 93 16 3 chr13 59377255 59377632 -60906680 - MTC LTR MaLR 0 421 40 5 1038 383 224 54 21 chr13 59378713 59378954 -60905358 + RMER17D LTR ERVK 297 545 -344 5 1038 2745 60 30 8 chr13 59379037 59379408 -60904904 - MTB LTR MaLR 0 400 22 5 1038 417 20 0 0 chr13 59380324 59380374 -60903938 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1038 509 333 59 53 chr13 59380939 59381278 -60903034 - MLT1A0 LTR MaLR -24 341 1 5 1038 391 328 126 24 chr13 59381640 59382093 -60902219 + L1ME3 LINE L1 668 1166 -5076 5 1038 254 319 35 3 chr13 59382234 59382413 -60901899 + L1MA7 LINE L1 6049 6237 -63 5 1038 797 262 45 0 chr13 59382622 59382824 -60901488 + B3 SINE B2 3 213 -3 5 1038 1171 55 0 14 chr13 59382989 59383137 -60901175 + B1_Mm SINE Alu 2 147 0 5 1038 300 339 39 0 chr13 59383855 59383985 -60900327 + L1ME3 LINE L1 4155 4289 -1857 5 1038 1296 34 0 0 chr13 59383991 59384138 -60900174 + B1_Mus2 SINE Alu 1 147 0 5 1038 422 356 50 28 chr13 59384236 59384634 -60899678 + L1ME3 LINE L1 5412 5818 -355 5 1038 751 134 45 45 chr13 59384794 59384950 -60899362 - Lx4A LINE L1 -1 7057 6902 5 1038 889 48 0 0 chr13 59384959 59385062 -60899250 + Lx4A LINE L1 6818 6920 -138 5 1038 234 200 15 44 chr13 59385074 59385142 -60899170 + L1ME3 LINE L1 5937 6002 -160 5 1038 723 257 0 7 chr13 59385270 59385419 -60898893 + B3A SINE B2 1 148 -50 5 1038 270 56 0 0 chr13 59385421 59385457 -60898855 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1038 550 182 103 133 chr13 59385999 59386164 -60898148 + ORR1C2 LTR MaLR 11 170 -214 5 1038 207 0 0 0 chr13 59386165 59386188 -60898124 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 5 1038 247 195 59 94 chr13 59386200 59386285 -60898027 - ORR1C1 LTR MaLR -296 82 1 5 1038 21 0 0 0 chr13 59386305 59386326 -60897986 + AT_rich Low_complexity Low_complexity 1 21 0 5 1038 189 0 0 0 chr13 59386371 59386392 -60897920 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1038 186 43 0 0 chr13 59388113 59388136 -60896176 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1038 21 36 0 0 chr13 59388280 59388308 -60896004 + AT_rich Low_complexity Low_complexity 1 28 0 5 1038 297 75 0 0 chr13 59388601 59388641 -60895671 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1038 2969 194 37 10 chr13 59389469 59390069 -60894243 + RLTR18 LTR ERVK 1 616 0 5 1038 315 0 0 0 chr13 59390288 59390323 -60893989 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 1038 543 245 229 49 chr13 59390944 59391167 -60893145 + B4A SINE B4 1 263 -29 5 1038 239 350 67 25 chr13 59392070 59392190 -60892122 + B4A SINE B4 82 206 -86 5 1038 451 206 11 21 chr13 59392097 59392191 -60892121 + PB1D10 SINE Alu 23 115 -2 5 1038 1043 122 0 6 chr13 59392249 59392422 -60891890 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 5 1038 303 294 89 53 chr13 59392452 59392621 -60891691 + HAL1-3A_ME LINE L1 2286 2460 -398 5 1038 265 84 0 44 chr13 59393329 59393386 -60890926 + B2_Mm1t SINE B2 38 89 -104 5 1038 843 142 44 15 chr13 59393618 59393754 -60890558 + B1_Mur3 SINE Alu 1 140 -9 5 1038 1032 156 0 0 chr13 59393754 59393934 -60890378 + GA-rich Low_complexity Low_complexity 1 180 0 5 1038 285 29 0 0 chr13 59393934 59393968 -60890344 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1038 898 326 138 16 chr13 59395063 59395799 -60888513 + L1MA6 LINE L1 5435 6253 -50 5 1038 541 277 93 25 chr13 59396300 59396537 -60887775 + Lx9 LINE L1 7261 7513 -131 5 1038 308 156 0 60 chr13 59396538 59396654 -60887658 + (TA)n Simple_repeat Simple_repeat 2 110 0 5 1038 210 338 0 0 chr13 59396710 59396781 -60887531 + (TA)n Simple_repeat Simple_repeat 1 71 0 5 1038 2795 229 72 8 chr13 59396800 59397422 -60886890 + Lx6 LINE L1 6506 7459 -1 5 1038 430 279 69 31 chr13 59398669 59398828 -60885484 - MTEa LTR MaLR -207 172 8 5 1038 331 341 48 32 chr13 59399324 59399512 -60884800 - MLT1J2 LTR MaLR -255 193 3 5 1038 267 309 14 68 chr13 59399651 59399797 -60884515 + MLT1A0 LTR MaLR 1 138 -227 5 1038 466 287 91 34 chr13 59399814 59400077 -60884235 + B4 SINE B4 3 280 -12 5 1038 394 359 1 12 chr13 59400205 59400353 -60883959 + MLT1A0 LTR MaLR 217 362 -28 5 1038 314 301 0 0 chr13 59400637 59400720 -60883592 + L1MC LINE L1 5665 5747 -2135 5 1038 309 286 57 9 chr13 59401596 59401702 -60882610 + MER2 DNA MER2_type 121 231 -114 5 1038 509 202 25 50 chr13 59402098 59402218 -60882094 + RLTR40 LTR ERVK 19 135 -682 5 1038 394 335 145 5 chr13 59402922 59403129 -60881183 + MLT1D LTR MaLR 261 496 -9 6 1038 4136 138 88 96 chr13 59403456 59403852 -60880460 + RMER17C-int LTR ERVK 2243 2603 -635 6 1038 295 93 0 69 chr13 59403852 59403910 -60880402 - LSU-rRNA_Hsa rRNA rRNA -779 4256 4203 6 1038 4136 138 88 96 chr13 59403910 59404205 -60880107 + RMER17C-int LTR ERVK 2604 2873 -365 6 1038 342 0 0 0 chr13 59404205 59404243 -60880069 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1038 4136 134 100 108 chr13 59404243 59404587 -60879725 + RMER17C-int LTR ERVK 2874 3237 -1 6 1038 527 246 8 25 chr13 59404587 59404684 -60879628 + RMER17C LTR ERVK 1 96 -314 6 1038 911 38 23 8 chr13 59404684 59404817 -60879495 + (TC)n Simple_repeat Simple_repeat 2 136 0 6 1038 527 246 8 25 chr13 59404817 59404840 -60879472 + RMER17C LTR ERVK 97 119 -291 6 1038 725 205 55 33 chr13 59404818 59405000 -60879312 + RMER17C LTR ERVK 225 410 0 6 1038 652 303 61 14 chr13 59406535 59406813 -60877499 + B4A SINE B4 2 292 0 6 1038 603 180 9 4 chr13 59406813 59407052 -60877260 + (CA)n Simple_repeat Simple_repeat 1 240 0 6 1038 876 127 0 0 chr13 59407064 59407229 -60877083 + (CA)n Simple_repeat Simple_repeat 2 166 0 6 1038 221 152 0 42 chr13 59407623 59407671 -60876641 + A-rich Low_complexity Low_complexity 2 47 0 6 1038 702 170 62 0 chr13 59409215 59409327 -60874985 + PB1D9 SINE Alu 2 120 0 6 1038 291 345 81 9 chr13 59409363 59409474 -60874838 + MER5A DNA MER1_type 1 119 -70 6 1038 927 203 66 5 chr13 59409705 59409903 -60874409 + B3 SINE B2 2 211 -5 6 1038 946 86 62 0 chr13 59409938 59410093 -60874219 + B2_Mm2 SINE B2 2 192 -24 6 1038 372 104 0 0 chr13 59410095 59410162 -60874150 + (CATA)n Simple_repeat Simple_repeat 2 68 0 6 1038 246 127 218 0 chr13 59410590 59410645 -60873667 + B3 SINE B2 145 211 -5 6 1038 1107 80 0 0 chr13 59410910 59411061 -60873251 + (TGGA)n Simple_repeat Simple_repeat 3 153 0 6 1038 541 248 17 0 chr13 59411189 59411306 -60873006 + B1_Mur1 SINE Alu 29 147 -2 6 1038 234 116 0 0 chr13 59411393 59411436 -60872876 + (TCTG)n Simple_repeat Simple_repeat 1 43 0 6 1038 1233 41 7 0 chr13 59411504 59411650 -60872662 + B1_Mus2 SINE Alu 1 147 0 6 1038 630 305 20 16 chr13 59412075 59412295 -60872017 - MER2 DNA MER2_type -28 317 81 6 1038 565 161 202 0 chr13 59412850 59412974 -60871338 + B1_Mur2 SINE Alu 1 149 0 6 1038 21 36 0 0 chr13 59412974 59413002 -60871310 + AT_rich Low_complexity Low_complexity 1 28 0 6 1038 376 332 41 26 chr13 59413421 59413616 -60870696 - L3 LINE CR1 -9 4480 4283 6 1038 752 251 30 35 chr13 59413746 59413900 -60870412 + B3A SINE B2 2 159 -39 6 1038 423 0 0 0 chr13 59413900 59413947 -60870365 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1038 752 251 30 35 chr13 59413947 59413990 -60870322 + B3A SINE B2 160 198 0 6 1038 358 312 73 11 chr13 59415442 59415620 -60868692 - Helitron1Nb_Mam RC Helitron -198 918 730 6 1038 238 274 54 14 chr13 59415774 59415848 -60868464 - Helitron1Nb_Mam RC Helitron -647 469 393 6 1038 1068 177 78 0 chr13 59415864 59415924 -60868388 + B3 SINE B2 9 69 -147 6 1038 252 0 0 0 chr13 59415924 59415952 -60868360 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1038 1068 177 78 0 chr13 59415952 59416083 -60868229 + B3 SINE B2 70 214 -2 6 1038 21 0 0 0 chr13 59416083 59416104 -60868208 + AT_rich Low_complexity Low_complexity 1 21 0 6 1038 257 294 0 0 chr13 59416681 59416749 -60867563 + ID4_ SINE ID 2 69 -14 6 1038 225 324 27 40 chr13 59416816 59416890 -60867422 + PB1 SINE Alu 1 73 -54 6 1038 312 27 0 0 chr13 59416895 59416932 -60867380 + (TCTG)n Simple_repeat Simple_repeat 1 37 0 6 1038 663 65 0 0 chr13 59416934 59417027 -60867285 + (TG)n Simple_repeat Simple_repeat 2 94 0 6 1038 416 278 87 0 chr13 59417032 59417158 -60867154 - Tigger7 DNA MER2_type -93 2398 2262 6 1038 206 250 18 27 chr13 59417599 59417710 -60866602 + GA-rich Low_complexity Low_complexity 2 111 0 6 1038 618 241 12 64 chr13 59418186 59418364 -60865948 + B3 SINE B2 2 154 -41 6 1038 593 185 6 0 chr13 59418449 59418627 -60865685 + GA-rich Low_complexity Low_complexity 2 180 0 6 1038 252 0 0 0 chr13 59418945 59418973 -60865339 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1038 329 287 110 9 chr13 59420337 59420446 -60863866 + RSINE1 SINE B4 3 122 -43 6 1038 696 264 52 9 chr13 59420595 59420805 -60863507 + ID_B1 SINE B4 2 220 -4 6 1038 3153 63 19 5 chr13 59421050 59421465 -60862847 + BGLII LTR ERVK 1 421 0 6 1038 788 239 63 39 chr13 59422848 59423053 -60861259 - B3 SINE B2 -6 210 1 6 1038 1013 209 44 0 chr13 59423734 59423940 -60860372 - B3 SINE B2 0 216 2 6 1038 219 61 19 58 chr13 59424689 59424741 -60859571 + (CAAAAA)n Simple_repeat Simple_repeat 2 51 0 6 1038 534 261 8 0 chr13 59426579 59426698 -60857614 - RSINE1 SINE B4 -45 120 1 6 1038 5845 27 0 3 chr13 59427211 59427881 -60856431 + L1Md_F2 LINE L1 5914 6581 -1 6 1038 2345 142 38 3 chr13 59427969 59428337 -60855975 - ORR1B1 LTR MaLR -13 381 1 6 1038 323 299 11 73 chr13 59428345 59428522 -60855790 - Lx9 LINE L1 -190 7454 7289 6 1038 835 234 31 20 chr13 59428603 59428799 -60855513 - B3 SINE B2 -18 198 1 6 1038 639 271 117 46 chr13 59428801 59428918 -60855394 + Lx9 LINE L1 6619 6733 -911 6 1038 2992 35 81 5 chr13 59428918 59429290 -60855022 + MTB LTR MaLR 1 400 0 6 1038 639 271 117 46 chr13 59429290 59429412 -60854900 + Lx9 LINE L1 6734 6875 -769 6 1038 577 240 93 40 chr13 59429757 59429983 -60854329 + Lx9 LINE L1 6870 7107 -537 6 1038 441 0 0 0 chr13 59431712 59431761 -60852551 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1038 25 31 0 0 chr13 59432099 59432131 -60852181 + AT_rich Low_complexity Low_complexity 1 32 0 6 1038 200 280 20 0 chr13 59432252 59432302 -60852010 + CT-rich Low_complexity Low_complexity 3 53 0 6 1038 236 289 88 32 chr13 59432829 59432954 -60851358 + MLT1A LTR MaLR 236 367 -7 6 1038 379 297 89 83 chr13 59433050 59433219 -60851093 + B4A SINE B4 123 292 0 6 1038 303 237 0 0 chr13 59433222 59433315 -60850997 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 1038 318 283 0 0 chr13 59433376 59433535 -60850777 + (CA)n Simple_repeat Simple_repeat 1 159 0 6 1038 267 228 174 54 chr13 59433540 59433681 -60850631 - RLTR21 LTR ERVK -318 1254 1094 6 1038 250 200 0 0 chr13 59433681 59433726 -60850586 + ORR1C2 LTR MaLR 1 45 -339 6 1038 1149 285 134 20 chr13 59434031 59434478 -60849834 - MTE-int LTR MaLR -1082 498 1 6 1038 347 365 10 16 chr13 59435067 59435259 -60849053 + L1MEc LINE L1 45 235 -6165 6 1038 396 330 63 74 chr13 59435282 59435561 -60848751 + L1MEc LINE L1 3914 4213 -2106 6 1038 1004 134 6 0 chr13 59435720 59435891 -60848421 + (GGAGA)n Simple_repeat Simple_repeat 5 176 0 6 1038 217 320 166 17 chr13 59435939 59436080 -60848232 + B3 SINE B2 4 163 -53 6 1038 198 0 0 0 chr13 59436080 59436102 -60848210 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 1038 217 320 166 17 chr13 59436102 59436141 -60848171 + B3 SINE B2 164 210 -6 6 1038 246 62 0 0 chr13 59437814 59437846 -60846466 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 6 1038 1105 172 13 61 chr13 59438562 59438791 -60845521 + URR1B DNA MER1_type 5 222 -3 6 1038 1477 230 83 21 chr13 59440330 59440703 -60843609 - MTD LTR MaLR -14 405 10 6 1038 711 281 62 41 chr13 59440914 59441204 -60843108 + Lx9 LINE L1 6906 7201 -443 6 1038 414 59 0 0 chr13 59441430 59441481 -60842831 + RMER1B Other Other 304 354 -712 6 1038 2873 173 59 54 chr13 59441495 59441939 -60842373 + RMER1B Other Other 468 918 -148 6 1038 306 0 0 0 chr13 59441939 59441973 -60842339 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 6 1038 2873 173 59 54 chr13 59441973 59441991 -60842321 + RMER1B Other Other 919 929 -137 6 1038 234 0 0 0 chr13 59441991 59442017 -60842295 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1038 2873 173 59 54 chr13 59442017 59442146 -60842166 + RMER1B Other Other 930 1063 -3 6 1038 402 21 0 0 chr13 59442297 59442344 -60841968 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1038 777 176 184 16 chr13 59442357 59442542 -60841770 + B3 SINE B2 1 216 0 6 1038 1220 55 0 0 chr13 59442574 59442720 -60841592 + B1_Mus1 SINE Alu 2 147 -1 6 1038 636 314 105 64 chr13 59443137 59443623 -60840689 - MLT1H1 LTR MaLR -18 537 32 6 1038 3040 89 2 5 chr13 59445337 59445743 -60838569 - MTB_Mm LTR MaLR -1 406 2 6 1038 723 314 140 8 chr13 59447324 59447681 -60836631 + Lx8 LINE L1 7063 7466 -7 6 1038 422 284 73 15 chr13 59448643 59448779 -60835533 + B1F1 SINE Alu 5 148 -1 6 1038 194 265 138 46 chr13 59449179 59449266 -60835046 + MIRc SINE MIR 56 150 -118 6 1038 375 301 142 79 chr13 59449424 59449843 -60834469 - MLT2B5 LTR ERVL -76 480 3 6 1038 784 223 133 0 chr13 59449953 59450141 -60834171 + B3 SINE B2 3 215 -1 6 1038 1005 188 55 25 chr13 59450571 59450773 -60833539 - B3 SINE B2 -6 210 3 6 1038 370 215 25 40 chr13 59450878 59451197 -60833115 + GA-rich Low_complexity Low_complexity 1 314 0 6 1038 390 277 0 0 chr13 59451253 59451564 -60832748 + (TG)n Simple_repeat Simple_repeat 1 311 0 6 1038 207 188 0 0 chr13 59451586 59451634 -60832678 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1038 529 213 6 6 chr13 59451729 59451904 -60832408 + (TG)n Simple_repeat Simple_repeat 2 176 0 6 1038 445 282 25 16 chr13 59452956 59453098 -60831214 + B3 SINE B2 59 197 -1 6 1038 765 291 109 37 chr13 59453229 59453632 -60830680 + L1MA6 LINE L1 5274 5705 -592 6 1038 281 304 92 54 chr13 59453653 59453967 -60830345 + L1MA6 LINE L1 5681 6009 -291 6 1038 629 86 0 11 chr13 59454386 59454480 -60829832 + (TCTCCC)n Simple_repeat Simple_repeat 4 96 0 6 1038 422 234 43 0 chr13 59454748 59454842 -60829470 + MTE2a LTR MaLR 1 98 -281 6 1038 443 293 0 0 chr13 59454844 59454943 -60829369 + MTE2a LTR MaLR 60 158 -221 6 1038 297 0 0 0 chr13 59454957 59454990 -60829322 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1038 542 16 0 0 chr13 59454990 59455054 -60829258 - B1_Mus2 SINE Alu -9 138 75 6 1038 311 223 0 159 chr13 59455054 59455094 -60829218 - ID_B1 SINE B4 -75 217 124 6 1038 1506 166 84 0 chr13 59455072 59455356 -60828956 - RMER19B LTR ERVK -209 693 386 6 1038 1477 206 27 3 chr13 59456115 59456408 -60827904 - RMER19B LTR ERVK -602 300 1 6 1038 285 295 63 0 chr13 59456453 59456548 -60827764 + MTE2a LTR MaLR 279 379 0 6 1038 207 208 0 20 chr13 59456592 59456641 -60827671 + GA-rich Low_complexity Low_complexity 1 48 0 6 1038 985 213 30 5 chr13 59457175 59457378 -60826934 + B3 SINE B2 2 209 -7 6 1038 1307 203 94 58 chr13 59458358 59458839 -60825473 - RMER4B LTR ERVK -11 574 47 6 1038 1677 154 35 69 chr13 59458984 59459426 -60824886 + RMER17C LTR ERVK 16 439 -519 6 1038 489 194 71 2 chr13 59459456 59459575 -60824737 + MTEa LTR MaLR 6 134 -245 6 1038 401 226 19 38 chr13 59459628 59459734 -60824578 + MTEa LTR MaLR 276 379 0 6 1038 507 73 0 0 chr13 59460773 59460841 -60823471 + (TTCC)n Simple_repeat Simple_repeat 1 68 0 6 1038 376 135 27 0 chr13 59460828 59460902 -60823410 + CT-rich Low_complexity Low_complexity 2 77 0 6 1038 1227 96 73 0 chr13 59461921 59462098 -60822214 + B2_Mm2 SINE B2 1 190 -5 6 1038 547 255 20 7 chr13 59462143 59462289 -60822023 + B3A SINE B2 14 161 -37 7 1038 414 288 31 3 chr13 59462306 59462425 -60821887 + MER74B LTR ERVL 142 370 -252 7 1038 366 341 68 5 chr13 59462751 59462972 -60821340 - ERVL-E-int LTR ERVL -4429 1238 1004 7 1038 354 188 16 0 chr13 59463360 59463424 -60820888 + RSINE1 SINE B4 67 131 -34 7 1038 285 98 0 0 chr13 59463425 59463466 -60820846 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1038 379 299 69 103 chr13 59463479 59463654 -60820658 + ID_B1 SINE B4 8 176 -48 7 1038 594 0 0 0 chr13 59463665 59463731 -60820581 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 7 1038 195 139 0 0 chr13 59463751 59463787 -60820525 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 7 1038 227 255 21 0 chr13 59463787 59463834 -60820478 + PB1D9 SINE Alu 2 49 -71 7 1038 205 171 0 68 chr13 59465040 59465084 -60819228 + polypyrimidine Low_complexity Low_complexity 2 42 0 7 1038 413 332 105 52 chr13 59465248 59465496 -60818816 - MLT1A0 LTR MaLR -104 261 1 7 1038 195 42 0 0 chr13 59466026 59466050 -60818262 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1038 629 226 83 93 chr13 59466104 59466277 -60818035 - B3 SINE B2 0 216 38 7 1038 932 142 23 40 chr13 59466277 59466453 -60817859 - B2_Mm2 SINE B2 -19 176 4 7 1038 629 226 83 93 chr13 59466453 59466484 -60817828 - B3 SINE B2 -179 37 14 7 1038 183 256 11 79 chr13 59466547 59466636 -60817676 + MIRc SINE MIR 117 199 -69 7 1038 1781 168 48 108 chr13 59467114 59467514 -60816798 + RLTR14 LTR ERV1 7 382 0 7 1038 266 292 31 55 chr13 59467514 59467639 -60816673 + Tigger9a DNA Tigger 610 731 -1 7 1038 285 29 0 0 chr13 59468242 59468276 -60816036 + (TGG)n Simple_repeat Simple_repeat 1 34 0 7 1038 225 180 0 39 chr13 59469309 59469335 -60814977 + T-rich Low_complexity Low_complexity 26 50 0 7 1038 657 134 8 0 chr13 59469335 59469454 -60814858 - Lx LINE L1 -1 6653 6534 7 1038 225 180 0 39 chr13 59469454 59469479 -60814833 + T-rich Low_complexity Low_complexity 1 25 0 7 1038 21 0 0 0 chr13 59470452 59470473 -60813839 + AT_rich Low_complexity Low_complexity 1 21 0 7 1038 3339 21 29 0 chr13 59470828 59471213 -60813099 - MTA_Mm LTR MaLR 0 396 1 7 1038 304 267 56 19 chr13 59473059 59473166 -60811146 + L1MDa LINE L1 2391 2501 -4132 7 1038 805 312 25 11 chr13 59477238 59477520 -60806792 - B4A SINE B4 -6 286 1 7 1038 1126 223 0 0 chr13 59478250 59478465 -60805847 + B3 SINE B2 1 215 -1 7 1038 3134 75 18 0 chr13 59478720 59479120 -60805192 - MTB_Mm LTR MaLR 0 407 1 7 1038 330 115 82 0 chr13 59479120 59479181 -60805131 - MTB_Mm-int LTR MaLR 0 1098 1033 7 1038 456 18 0 0 chr13 59479181 59479205 -60805107 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1038 1217 68 0 0 chr13 59479205 59479353 -60804959 - B1_Mus1 SINE Alu 0 148 1 7 1038 456 18 0 0 chr13 59479353 59479383 -60804929 + (T)n Simple_repeat Simple_repeat 1 30 0 7 1038 5682 129 38 82 chr13 59479386 59480482 -60803830 - MTB_Mm-int LTR MaLR -47 1051 4 7 1038 1145 112 0 12 chr13 59480482 59480629 -60803683 + ORR1A3 LTR MaLR 182 326 0 7 1038 2046 219 26 143 chr13 59480636 59481328 -60802984 + RMER19C LTR ERVK 1 611 0 7 1038 24 0 0 0 chr13 59481443 59481467 -60802845 + AT_rich Low_complexity Low_complexity 1 24 0 7 1038 403 245 11 11 chr13 59482992 59483087 -60801225 + PB1D10 SINE Alu 23 117 0 7 1038 207 0 0 0 chr13 59483156 59483179 -60801133 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 7 1038 2918 49 3 8 chr13 59483195 59483566 -60800746 - L1Md_F2 LINE L1 0 6582 6214 7 1038 5229 45 0 0 chr13 59483566 59484346 -60799966 + L1Md_F2 LINE L1 5417 6196 -386 7 1038 370 304 0 0 chr13 59484728 59484807 -60799505 - ID2 SINE ID -4 79 1 7 1038 2758 139 137 75 chr13 59485944 59486519 -60797793 + RMER19C LTR ERVK 1 611 0 7 1038 823 239 72 0 chr13 59486879 59487059 -60797253 + B3 SINE B2 1 193 -23 7 1038 479 223 118 66 chr13 59487112 59487323 -60796989 + L1MD LINE L1 5559 5780 -579 7 1038 672 205 235 33 chr13 59487653 59487943 -60796369 - MTD LTR MaLR -41 378 3 7 1038 289 220 9 9 chr13 59488034 59488144 -60796168 + (CA)n Simple_repeat Simple_repeat 1 110 0 7 1038 602 225 130 16 chr13 59489114 59489299 -60795013 + B3 SINE B2 1 206 -10 7 1038 623 184 51 38 chr13 59489898 59490056 -60794256 + ORR1D2 LTR MaLR 211 370 0 7 1038 312 359 163 28 chr13 59490574 59490935 -60793377 + L1MD LINE L1 4804 5213 -933 7 1038 269 312 200 0 chr13 59490941 59491111 -60793201 + L1ME3 LINE L1 5272 5475 -704 7 1038 672 205 51 0 chr13 59491248 59491365 -60792947 + B1_Mur1 SINE Alu 10 132 -17 7 1038 307 312 74 47 chr13 59491365 59491396 -60792916 + B4A SINE B4 95 246 -46 7 1038 338 319 98 5 chr13 59491488 59491693 -60792619 + L1ME3 LINE L1 5696 5919 -243 7 1038 300 191 47 23 chr13 59491693 59491952 -60792360 + (CA)n Simple_repeat Simple_repeat 1 265 0 7 1038 284 136 0 0 chr13 59492184 59492228 -60792084 + ORR1A3 LTR MaLR 283 326 0 7 1038 375 279 10 0 chr13 59492236 59492340 -60791972 + (CA)n Simple_repeat Simple_repeat 1 105 0 7 1038 184 352 66 9 chr13 59492345 59492451 -60791861 + MIRb SINE MIR 116 227 -41 7 1038 440 213 12 4 chr13 59492669 59492919 -60791393 + (TG)n Simple_repeat Simple_repeat 1 252 0 7 1038 449 268 160 23 chr13 59492919 59493154 -60791158 - B4A SINE B4 0 292 25 7 1038 207 0 0 0 chr13 59493154 59493177 -60791135 + (C)n Simple_repeat Simple_repeat 1 23 0 7 1038 449 268 160 23 chr13 59493177 59493197 -60791115 - B4A SINE B4 -268 24 3 7 1038 666 309 165 33 chr13 59493457 59493882 -60790430 + MER77 LTR ERVL 96 576 -31 7 1038 333 0 0 0 chr13 59493882 59493919 -60790393 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1038 25 0 0 0 chr13 59494248 59494273 -60790039 + AT_rich Low_complexity Low_complexity 1 25 0 7 1038 297 346 86 21 chr13 59494346 59494532 -60789780 + MLT1J LTR MaLR 24 221 -291 7 1038 324 0 0 0 chr13 59495032 59495068 -60789244 + (GA)n Simple_repeat Simple_repeat 1 36 0 7 1038 374 298 86 18 chr13 59495294 59495526 -60788786 - MIRm SINE MIR -10 258 8 7 1038 990 73 73 7 chr13 59495544 59495681 -60788631 + B1_Mm SINE Alu 2 147 0 7 1038 335 169 0 14 chr13 59495683 59495755 -60788557 + GA-rich Low_complexity Low_complexity 3 73 0 7 1038 297 167 0 0 chr13 59497474 59497528 -60786784 + GA-rich Low_complexity Low_complexity 1 54 0 7 1038 1213 48 7 0 chr13 59497812 59497957 -60786355 + B1_Mus1 SINE Alu 3 148 0 7 1038 700 210 6 11 chr13 59497977 59498155 -60786157 + GA-rich Low_complexity Low_complexity 3 179 0 7 1038 217 105 0 50 chr13 59498190 59498230 -60786082 + A-rich Low_complexity Low_complexity 2 39 0 7 1038 4489 113 48 3 chr13 59498307 59498420 -60785892 - Lx2 LINE L1 0 6997 6885 7 1038 225 0 0 0 chr13 59498420 59498445 -60785867 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 7 1038 4489 113 48 3 chr13 59498445 59498997 -60785315 - Lx2 LINE L1 -113 6884 6303 7 1038 248 250 153 0 chr13 59499787 59499859 -60784453 - MIR SINE MIR -30 232 150 7 1038 705 91 71 18 chr13 59500630 59500742 -60783570 - ORR1A2 LTR MaLR -209 118 1 1 1038 297 0 0 0 chr13 59501483 59501516 -60782796 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1038 484 317 0 0 chr13 59501519 59501639 -60782673 - B3A SINE B2 -28 170 51 3 1038 1429 66 27 0 chr13 59501667 59501850 -60782462 - B2_Mm2 SINE B2 -7 188 1 4 1038 476 272 31 82 chr13 59501980 59502176 -60782136 + Tigger7 DNA MER2_type 2271 2456 -35 5 1038 1026 15 23 0 chr13 59504478 59504610 -60779702 + (TC)n Simple_repeat Simple_repeat 1 135 0 6 1038 438 99 62 106 chr13 59505058 59505171 -60779141 - Lx LINE L1 0 6997 6890 7 1038 3132 41 5 20 chr13 59505171 59505304 -60779008 + MTA_Mm LTR MaLR 1 133 -263 8 1038 3565 20 2 0 chr13 59505304 59505699 -60778613 - MTA_Mm LTR MaLR 0 396 1 9 1038 3132 41 5 20 chr13 59505699 59505967 -60778345 + MTA_Mm LTR MaLR 134 396 0 8 129 5712 85 48 36 chr13 59505967 59506808 -60777504 - Lx LINE L1 -108 6546 5696 7 1039 500 250 0 0 chr13 59507059 59507167 -60777145 + PB1D10 SINE Alu 2 109 -8 1 1039 791 234 17 12 chr13 59507174 59507340 -60776972 + B3 SINE B2 1 167 -49 1 1039 288 0 0 0 chr13 59507340 59507372 -60776940 + (CATA)n Simple_repeat Simple_repeat 4 35 0 1 1039 791 243 32 382 chr13 59507372 59507398 -60776914 + B3 SINE B2 154 181 -14 1 1039 247 277 29 19 chr13 59507404 59507507 -60776805 + (CATA)n Simple_repeat Simple_repeat 3 106 0 1 1039 831 134 39 0 chr13 59508000 59508127 -60776185 + B1_Mus1 SINE Alu 15 146 -2 1 1039 894 278 126 0 chr13 59509303 59509558 -60774754 + B4A SINE B4 2 288 -4 1 1039 297 0 0 0 chr13 59509558 59509591 -60774721 + (TC)n Simple_repeat Simple_repeat 1 33 0 1 1039 270 0 0 0 chr13 59509591 59509620 -60774692 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1039 213 182 0 0 chr13 59509694 59509749 -60774563 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1039 411 301 109 21 chr13 59510212 59510541 -60773771 + L1M5 LINE L1 3655 4012 -2134 1 1039 1369 229 50 63 chr13 59512269 59512665 -60771647 - MTD LTR MaLR -17 402 12 2 1039 2381 126 85 20 chr13 59512819 59513265 -60771047 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1039 2277 154 8 6 chr13 59513434 59513800 -60770512 - ORR1B2 LTR MaLR 0 367 1 2 1039 195 232 0 0 chr13 59514038 59514094 -60770218 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1039 234 378 14 0 chr13 59514107 59514181 -60770131 - ID4_ SINE ID -7 76 2 2 1039 914 208 37 42 chr13 59514770 59514986 -60769326 + B3 SINE B2 1 215 -1 2 1039 308 356 93 28 chr13 59515302 59515484 -60768828 + Kanga1c DNA Tc2 184 377 -352 2 1039 320 304 11 0 chr13 59516347 59516439 -60767873 + U6 snRNA snRNA 9 101 -6 2 1039 243 0 0 0 chr13 59518620 59518647 -60765665 + (TC)n Simple_repeat Simple_repeat 2 28 0 2 1039 261 0 0 0 chr13 59518647 59518675 -60765637 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1039 2337 72 27 45 chr13 59518699 59519032 -60765280 - ORR1A2 LTR MaLR 0 327 1 3 1039 186 133 0 0 chr13 59519039 59519069 -60765243 + (TAA)n Simple_repeat Simple_repeat 2 31 0 3 1039 308 270 231 31 chr13 59519102 59519232 -60765080 - RSINE1 SINE B4 -2 163 8 3 1039 214 174 65 0 chr13 59519383 59519454 -60764858 + (CACCC)n Simple_repeat Simple_repeat 1 75 0 3 1039 817 274 113 40 chr13 59519830 59520157 -60764155 - ORR1E LTR MaLR -5 354 4 3 1039 657 233 157 26 chr13 59521464 59521693 -60762619 - L1M3 LINE L1 -350 5818 5560 3 1039 649 200 56 0 chr13 59522182 59522307 -60762005 - B3A SINE B2 -64 134 3 3 1039 627 14 0 0 chr13 59523045 59523117 -60761195 + (TC)n Simple_repeat Simple_repeat 2 73 0 3 1039 210 330 0 0 chr13 59523162 59523262 -60761050 + (TA)n Simple_repeat Simple_repeat 2 101 0 3 1039 288 297 102 48 chr13 59523736 59523902 -60760410 + MLT2F LTR ERVL 163 337 -326 3 1039 2478 121 75 33 chr13 59523918 59524346 -60759966 + RMER16 LTR ERVK 1 533 0 4 1039 306 0 0 0 chr13 59524901 59524935 -60759377 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1039 1157 61 6 18 chr13 59525544 59525711 -60758601 + L1Md_F2 LINE L1 6418 6582 0 4 1039 908 270 59 7 chr13 59525734 59526017 -60758295 + ORR1D2 LTR MaLR 1 307 -87 4 1039 619 304 59 16 chr13 59526017 59526204 -60758108 - Lx8 LINE L1 -1083 6390 6196 4 1039 199 288 34 0 chr13 59526865 59526924 -60757388 - L2a LINE L2 -15 3411 3351 4 1039 305 246 21 38 chr13 59527121 59527232 -60757080 + L1M4c LINE L1 2308 2416 -3968 4 1039 1134 305 171 26 chr13 59527342 59527889 -60756423 + L1M4c LINE L1 2586 3154 -3222 4 1039 234 0 0 0 chr13 59527889 59527915 -60756397 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1039 1134 305 171 26 chr13 59527915 59528615 -60755697 + L1M4c LINE L1 3155 4013 -2363 4 1039 567 259 7 35 chr13 59528620 59528764 -60755548 + RSINE1 SINE B4 1 140 -25 4 1039 457 240 67 45 chr13 59528769 59528948 -60755364 + L1M4c LINE L1 4003 4185 -2191 4 1039 1098 96 83 19 chr13 59528978 59529219 -60755093 - RMER19C LTR ERVK -277 334 1 4 1039 1268 177 23 0 chr13 59529258 59529478 -60754834 - URR1B DNA MER1_type 0 225 1 5 1039 306 344 57 21 chr13 59531216 59531409 -60752903 + L1MB8 LINE L1 5802 6001 -177 5 1039 775 236 24 12 chr13 59531462 59531629 -60752683 + B3 SINE B2 45 213 -3 5 1039 1176 49 7 0 chr13 59531649 59531793 -60752519 + B1_Mm SINE Alu 2 146 -1 5 1039 304 197 0 0 chr13 59531813 59531879 -60752433 + L1MB8 LINE L1 6101 6166 -12 5 1039 1310 72 0 58 chr13 59532187 59532378 -60751934 - B2_Mm2 SINE B2 -15 180 1 5 1039 531 15 30 0 chr13 59533297 59533364 -60750948 + B1_Mm SINE Alu 73 141 -6 5 1039 1191 72 0 0 chr13 59533364 59533544 -60750768 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1039 370 79 16 16 chr13 59534556 59534620 -60749692 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1039 882 160 99 39 chr13 59536027 59536209 -60748103 - B2_Mm2 SINE B2 0 195 3 5 1039 2169 150 232 21 chr13 59536882 59537364 -60746948 - RLTR31A_Mm LTR ERVK 0 584 1 6 1039 186 103 0 0 chr13 59537775 59537804 -60746508 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 1039 234 322 69 10 chr13 59538566 59538719 -60745593 - MIRb SINE MIR -98 170 13 6 1039 283 337 64 64 chr13 59538796 59538983 -60745329 - ORR1E LTR MaLR -169 190 4 6 1039 2157 309 132 50 chr13 59538983 59540237 -60744075 - ORR1E-int LTR MaLR -50 1530 172 6 1039 2304 138 27 25 chr13 59540299 59540701 -60743611 - RLTR16 LTR ERVK 0 505 103 6 1039 699 93 10 0 chr13 59540866 59540963 -60743349 - RLTR16 LTR ERVK -407 98 1 6 1039 226 333 65 0 chr13 59541017 59541110 -60743202 - ORR1E-int LTR MaLR -1461 119 21 6 1039 550 238 347 42 chr13 59541271 59541556 -60742756 - ORR1E LTR MaLR -7 372 1 6 1039 467 246 31 16 chr13 59541907 59542035 -60742277 - Lx7 LINE L1 -583 7113 6984 6 1039 1392 89 21 0 chr13 59543049 59543239 -60741073 - B2_Mm2 SINE B2 0 195 2 6 1039 540 241 66 0 chr13 59544706 59544843 -60739469 + RSINE1 SINE B4 3 148 -17 6 1039 423 178 223 19 chr13 59545245 59545348 -60738964 - RSINE1 SINE B4 0 165 42 6 1039 303 231 12 60 chr13 59546240 59546323 -60737989 + ID4_ SINE ID 4 82 -1 7 1039 398 231 89 77 chr13 59546999 59547168 -60737144 - RLTR13D3 LTR ERVK 0 1114 944 7 1039 257 160 11 0 chr13 59547407 59547454 -60736858 - B2_Mm2 SINE B2 -148 50 1 7 1039 219 261 152 0 chr13 59550090 59550182 -60734130 - PB1D10 SINE Alu -10 107 2 7 1039 24 32 0 0 chr13 59551325 59551356 -60732956 + AT_rich Low_complexity Low_complexity 1 31 0 7 1039 420 20 0 0 chr13 59553931 59553980 -60730332 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 7 1039 289 246 162 7 chr13 59555806 59555964 -60728348 - MER77 LTR ERVL -5 558 390 7 1039 239 281 219 29 chr13 59556406 59556889 -60727423 + L1MEg LINE L1 633 1207 -4877 7 1039 266 276 6 0 chr13 59556986 59557160 -60727152 + (CA)n Simple_repeat Simple_repeat 1 175 0 7 1039 305 220 0 0 chr13 59557257 59557316 -60726996 + PB1D7 SINE Alu 52 110 -10 7 1039 292 278 54 63 chr13 59557426 59557649 -60726663 + L1MEg LINE L1 1646 1866 -4218 7 1039 218 105 26 0 chr13 59558248 59558286 -60726026 + (TCC)n Simple_repeat Simple_repeat 1 39 0 8 1039 1093 94 135 0 chr13 59558297 59558467 -60725845 - B2_Mm2 SINE B2 -1 194 2 8 1039 1730 144 10 104 chr13 59558506 59558892 -60725420 + ORR1B1 LTR MaLR 41 390 -4 8 1039 520 276 50 28 chr13 59559057 59559236 -60725076 - B4A SINE B4 -107 185 3 8 1039 213 254 98 33 chr13 59560902 59561024 -60723288 - RSINE1 SINE B4 -33 132 3 8 1039 354 23 0 0 chr13 59561547 59561590 -60722722 + (TTGG)n Simple_repeat Simple_repeat 2 44 0 8 1039 213 159 68 0 chr13 59562212 59562256 -60722056 - PB1D10 SINE Alu -1 116 70 8 1039 659 128 56 0 chr13 59562815 59562940 -60721372 + URR1B DNA MER1_type 93 224 -1 8 1039 338 245 11 0 chr13 59563165 59563259 -60721053 + B3A SINE B2 3 97 -101 8 1039 461 286 53 6 chr13 59563723 59563892 -60720420 + B3A SINE B2 4 180 -18 8 1039 290 258 0 0 chr13 59564444 59564510 -60719802 + ID4 SINE ID 2 67 -16 9 1039 373 267 27 150 chr13 59565448 59565668 -60718644 + B3A SINE B2 1 193 -5 9 1039 708 256 11 11 chr13 59566173 59566359 -60717953 + B3 SINE B2 1 186 -30 9 1039 206 167 20 20 chr13 59566915 59566964 -60717348 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 9 1039 216 0 0 0 chr13 59570367 59570391 -60713921 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1039 280 292 21 42 chr13 59571077 59571220 -60713092 + L1M2 LINE L1 2464 2592 -4257 9 1039 1021 305 148 73 chr13 59571520 59572914 -60711398 + L1M2 LINE L1 4050 5541 -1008 9 1039 986 201 270 7 chr13 59572914 59573121 -60711191 + ORR1D1 LTR MaLR 1 228 -146 9 1039 294 29 0 0 chr13 59573121 59573156 -60711156 + (CCTG)n Simple_repeat Simple_repeat 4 38 0 9 1039 986 201 270 7 chr13 59573156 59573244 -60711068 + ORR1D1 LTR MaLR 229 373 -1 9 1039 438 305 148 73 chr13 59573244 59573499 -60710813 + L1M2 LINE L1 5542 5822 -727 9 1039 381 280 73 48 chr13 59573518 59573683 -60710629 + B3A SINE B2 14 182 -16 9 1039 734 245 28 42 chr13 59573716 59573929 -60710383 - B3 SINE B2 -5 211 2 9 1039 260 70 23 0 chr13 59573948 59573991 -60710321 + (TTG)n Simple_repeat Simple_repeat 2 45 0 1 1039 229 311 43 12 chr13 59574000 59574163 -60710149 + L1M4 LINE L1 5223 5390 -756 1 1039 612 260 45 62 chr13 59574319 59574561 -60709751 + L1M2 LINE L1 5399 5636 -664 1 1039 244 274 26 1 chr13 59574574 59574659 -60709653 + L1M2 LINE L1 5824 5909 -382 1 1039 270 0 0 0 chr13 59574659 59574689 -60709623 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1039 378 120 0 0 chr13 59576563 59576638 -60707674 + (TC)n Simple_repeat Simple_repeat 2 76 0 1 1039 27 0 0 0 chr13 59577707 59577734 -60706578 + AT_rich Low_complexity Low_complexity 1 27 0 1 1039 225 343 41 27 chr13 59578026 59578173 -60706139 - B4A SINE B4 -135 157 9 1 1039 1318 218 72 30 chr13 59578646 59578981 -60705331 - ORR1D1 LTR MaLR 0 374 26 1 1039 308 232 123 49 chr13 59580003 59580166 -60704146 + L1MC5 LINE L1 7609 7783 -178 1 1039 455 243 84 21 chr13 59580171 59580314 -60703998 + RSINE1 SINE B4 3 154 -11 1 1039 1194 229 192 23 chr13 59580716 59581199 -60703113 + RMER4B LTR ERVK 15 579 -6 1 1039 511 162 69 107 chr13 59582088 59582219 -60702093 + RMER1B Other Other 937 1062 -4 1 1039 711 271 147 76 chr13 59583053 59583449 -60700863 + Lx8 LINE L1 7050 7473 0 1 1039 1607 176 100 3 chr13 59583450 59583791 -60700521 - MTC LTR MaLR -9 412 39 1 1039 295 184 11 11 chr13 59584478 59584566 -60699746 + (CA)n Simple_repeat Simple_repeat 1 88 0 1 1039 384 248 40 0 chr13 59584648 59584773 -60699539 + (CA)n Simple_repeat Simple_repeat 1 130 0 1 1039 1583 146 160 6 chr13 59584886 59585217 -60699095 + MTC LTR MaLR 1 382 -39 1 1039 1942 58 0 0 chr13 59585248 59585491 -60698821 + L1_Mus1 LINE L1 6323 6565 -2 1 1039 270 300 67 0 chr13 59585530 59585620 -60698692 + B1_Mur2 SINE Alu 3 98 -51 1 1039 592 256 75 11 chr13 59586502 59586688 -60697624 - B3A SINE B2 0 198 1 1 1039 974 205 34 5 chr13 59586996 59587202 -60697110 + B3 SINE B2 1 212 -4 1 1039 698 265 98 40 chr13 59587221 59587496 -60696816 + B4A SINE B4 1 291 -1 1 1039 180 53 79 0 chr13 59587503 59587541 -60696771 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1039 236 222 40 40 chr13 59587904 59587979 -60696333 - HAL1 LINE L1 -754 1753 1679 1 1039 23 0 0 0 chr13 59588510 59588533 -60695779 + AT_rich Low_complexity Low_complexity 1 23 0 1 1039 477 274 22 67 chr13 59590028 59590208 -60694104 + B4 SINE B4 1 172 -120 1 1039 530 177 11 39 chr13 59590324 59590506 -60693806 + (CATA)n Simple_repeat Simple_repeat 2 178 0 1 1039 470 220 19 28 chr13 59591556 59592025 -60692287 + GA-rich Low_complexity Low_complexity 1 464 0 1 1039 41 0 0 0 chr13 59592860 59592901 -60691411 + AT_rich Low_complexity Low_complexity 1 41 0 1 1039 23 0 0 0 chr13 59593150 59593173 -60691139 + AT_rich Low_complexity Low_complexity 1 23 0 1 1039 375 234 53 26 chr13 59593254 59593368 -60690944 + ID_B1 SINE B4 90 206 -18 1 1039 353 227 91 30 chr13 59593368 59593386 -60690926 + B1F1 SINE Alu 9 148 -1 1 1039 686 218 168 0 chr13 59594575 59594754 -60689558 + B3 SINE B2 3 211 -5 1 1039 23 0 0 0 chr13 59595264 59595287 -60689025 + AT_rich Low_complexity Low_complexity 1 23 0 1 1039 356 296 85 16 chr13 59595800 59595989 -60688323 + L1MD LINE L1 3464 3665 -2481 1 1039 718 158 77 26 chr13 59596066 59596222 -60688090 + B2_Mm2 SINE B2 1 164 -31 1 1039 32 26 0 0 chr13 59597011 59597050 -60687262 + AT_rich Low_complexity Low_complexity 1 39 0 1 1039 365 253 0 21 chr13 59597656 59597753 -60686559 + B1F SINE Alu 54 148 -1 1 1039 1858 199 79 5 chr13 59598759 59599138 -60685174 + MTB_Mm LTR MaLR 1 407 0 1 1039 781 195 0 45 chr13 59599212 59599368 -60684944 - B1_Mur4 SINE Alu 0 150 2 1 1039 277 301 0 0 chr13 59599935 59600008 -60684304 - MER58B DNA MER1_type -3 338 266 1 1039 612 143 49 32 chr13 59600219 59600378 -60683934 + B3 SINE B2 28 194 -4 1 1039 283 291 19 10 chr13 59600821 59600925 -60683387 + RLTR42-int LTR ERVK 1219 1323 -4199 1 1039 411 209 0 62 chr13 59602162 59602259 -60682053 + B3 SINE B2 126 216 0 1 1039 2536 182 206 20 chr13 59602615 59603216 -60681096 + RMER1B Other Other 353 1065 -1 1 1039 1161 167 108 0 chr13 59603835 59604039 -60680273 - URR1A DNA MER1_type 0 226 1 1 1039 200 267 0 16 chr13 59604342 59604403 -60679909 + C-rich Low_complexity Low_complexity 6 65 0 1 1039 408 254 138 8 chr13 59604839 59604962 -60679350 - B1_Mur2 SINE Alu -9 140 2 1 1039 702 116 18 9 chr13 59607009 59607122 -60677190 + B1_Mus2 SINE Alu 21 134 -13 1 1039 1154 134 21 0 chr13 59608663 59608857 -60675455 + ORR1B1 LTR MaLR 197 394 0 1 1039 21 0 0 0 chr13 59609727 59609748 -60674564 + AT_rich Low_complexity Low_complexity 1 21 0 1 1039 302 328 0 6 chr13 59612014 59612189 -60672123 + (CA)n Simple_repeat Simple_repeat 2 175 0 1 1039 237 183 0 0 chr13 59612387 59612447 -60671865 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1039 474 258 16 8 chr13 59612453 59612574 -60671738 - RSINE1 SINE B4 -40 125 4 1 1039 949 79 29 0 chr13 59612746 59612886 -60671426 + B1_Mus1 SINE Alu 5 148 0 1 1039 30 45 0 0 chr13 59612916 59612960 -60671352 + AT_rich Low_complexity Low_complexity 1 44 0 1 1039 281 290 94 74 chr13 59613229 59613378 -60670934 + RSINE1 SINE B4 14 165 0 1 1039 450 0 0 0 chr13 59614190 59614240 -60670072 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1039 210 37 0 0 chr13 59614313 59614340 -60669972 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 1 1039 462 114 0 0 chr13 59614396 59614466 -60669846 + (TC)n Simple_repeat Simple_repeat 1 70 0 1 1039 21 36 0 0 chr13 59615768 59615796 -60668516 + AT_rich Low_complexity Low_complexity 1 28 0 1 1039 24 0 0 0 chr13 59616277 59616301 -60668011 + AT_rich Low_complexity Low_complexity 1 24 0 1 1039 259 264 152 11 chr13 59616874 59616966 -60667346 + PB1D10 SINE Alu 13 117 0 1 1039 859 219 14 19 chr13 59617091 59617300 -60667012 + ID_B1 SINE B4 10 217 -7 1 1039 597 244 0 8 chr13 59618099 59618219 -60666093 - B1F2 SINE Alu -8 141 23 1 1039 366 334 129 24 chr13 59621579 59621693 -60662619 + MLT1C LTR MaLR 59 204 -263 1 1039 519 17 0 0 chr13 59621693 59621753 -60662559 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 1039 366 334 129 24 chr13 59621753 59621972 -60662340 + MLT1C LTR MaLR 205 426 -41 1 1039 213 143 24 0 chr13 59622052 59622094 -60662218 + GA-rich Low_complexity Low_complexity 1 43 0 1 1039 289 270 16 0 chr13 59622134 59622197 -60662115 - B3A SINE B2 -77 121 58 1 1039 531 271 21 7 chr13 59623222 59623367 -60660945 + RSINE1 SINE B4 2 148 -17 1 1039 306 73 0 0 chr13 59623390 59623431 -60660881 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1039 201 167 0 0 chr13 59624385 59624421 -60659891 + A-rich Low_complexity Low_complexity 1 36 0 1 1039 371 239 73 0 chr13 59624470 59624579 -60659733 + B3A SINE B2 3 119 -79 1 1039 298 282 102 8 chr13 59627965 59627979 -60656333 + B4 SINE B4 70 94 -198 1 1039 528 170 71 9 chr13 59627979 59628092 -60656220 + B1_Mus2 SINE Alu 1 120 -27 1 1039 596 177 15 8 chr13 59628187 59628318 -60655994 - B1_Mur3 SINE Alu 0 149 18 1 1039 324 0 0 0 chr13 59628548 59628584 -60655728 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1039 385 339 68 11 chr13 59628595 59628771 -60655541 - B4A SINE B4 -1 291 106 1 1039 1133 176 102 20 chr13 59628873 59629128 -60655184 + ORR1B2 LTR MaLR 1 276 -91 1 1039 437 231 49 16 chr13 59629280 59629403 -60654909 - MTE2b LTR MaLR -191 188 62 1 1039 471 287 50 39 chr13 59630432 59630613 -60653699 + B3A SINE B2 1 183 -15 1 1039 219 186 0 0 chr13 59630617 59630660 -60653652 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1039 234 308 43 11 chr13 59630701 59630793 -60653519 - L1MA5 LINE L1 -40 6260 6166 1 1039 270 168 101 101 chr13 59630783 59630902 -60653410 - L1MA5 LINE L1 0 6300 6182 1 1039 1320 84 22 0 chr13 59631469 59631647 -60652665 + B2_Mm2 SINE B2 2 183 -12 1 1039 304 114 70 18 chr13 59631691 59631754 -60652558 + B2_Mm2 SINE B2 46 116 -82 1 1039 180 0 0 0 chr13 59631770 59631790 -60652522 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1 1039 284 287 168 47 chr13 59632941 59633197 -60651115 + B4A SINE B4 5 291 -1 1 1039 393 250 20 0 chr13 59633652 59633752 -60650560 - RSINE1 SINE B4 -38 127 26 1 1039 292 262 54 62 chr13 59633773 59633903 -60650409 + B3A SINE B2 69 197 -1 1 1039 23 0 0 0 chr13 59633907 59633930 -60650382 + AT_rich Low_complexity Low_complexity 1 23 0 1 1039 396 323 0 15 chr13 59633935 59634067 -60650245 + RSINE1 SINE B4 2 131 -34 1 1039 861 143 0 0 chr13 59634233 59634453 -60649859 + (TG)n Simple_repeat Simple_repeat 1 220 0 1 1039 240 365 89 6 chr13 59636660 59636839 -60647473 + MTE-int LTR MaLR 1053 1246 -334 1 1039 239 347 51 57 chr13 59636887 59637064 -60647248 + MTE-int LTR MaLR 1358 1533 -47 1 1040 429 324 7 0 chr13 59638205 59638353 -60645959 + B1F SINE Alu 1 149 0 1 1040 1280 204 112 10 chr13 59639016 59639328 -60644984 + ORR1D1 LTR MaLR 17 360 -14 1 1040 681 47 0 0 chr13 59639377 59639462 -60644850 + (GGGGA)n Simple_repeat Simple_repeat 3 87 0 1 1040 264 59 0 0 chr13 59639477 59639511 -60644801 + (ATGGTG)n Simple_repeat Simple_repeat 5 38 0 1 1040 420 295 40 16 chr13 59639735 59639943 -60644369 + MTE2a LTR MaLR 1 200 -219 1 1040 447 182 277 34 chr13 59640538 59640686 -60643626 + ID_B1 SINE B4 5 188 -36 1 1040 4112 229 118 27 chr13 59641014 59642251 -60642061 + Lx9 LINE L1 6294 7643 -1 2 1040 698 251 78 10 chr13 59642367 59642560 -60641752 + B3 SINE B2 8 213 -3 2 1040 396 216 0 0 chr13 59642583 59642685 -60641627 + (TA)n Simple_repeat Simple_repeat 2 103 0 2 1040 320 193 72 0 chr13 59642720 59642803 -60641509 + L1M4 LINE L1 2323 2411 -3735 2 1040 283 271 132 25 chr13 59643213 59643334 -60640978 + B3 SINE B2 71 204 -12 2 1040 285 250 58 120 chr13 59643533 59643824 -60640488 + L1MD LINE L1 3154 3426 -2720 2 1040 222 37 0 0 chr13 59645009 59645036 -60639276 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1040 225 0 0 0 chr13 59645417 59645442 -60638870 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2 1040 971 113 60 0 chr13 59645442 59645592 -60638720 - B2_Mm2 SINE B2 -34 161 3 2 1040 557 275 50 121 chr13 59646054 59646451 -60637861 + ORR1E LTR MaLR 2 370 0 2 1040 209 132 0 26 chr13 59646921 59646960 -60637352 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 1040 281 266 125 31 chr13 59647164 59647292 -60637020 + ID_B1 SINE B4 76 215 -9 2 1040 534 312 78 56 chr13 59647721 59648095 -60636217 + Lx8 LINE L1 6999 7380 -93 2 1040 447 238 76 0 chr13 59648872 59648977 -60635335 + RSINE1 SINE B4 12 124 -41 2 1040 429 287 0 9 chr13 59649528 59649637 -60634675 + B1F SINE Alu 1 108 -41 2 1040 451 341 32 69 chr13 59649679 59650054 -60634258 + MLT1A0 LTR MaLR 1 361 -4 2 1040 207 239 0 0 chr13 59650295 59650362 -60633950 + (CA)n Simple_repeat Simple_repeat 1 67 0 2 1040 547 210 246 0 chr13 59650449 59650616 -60633696 + B3 SINE B2 1 208 -8 2 1040 301 233 75 37 chr13 59650681 59650788 -60633524 - RLTR22_Mur LTR ERVK -147 1701 1591 2 1040 872 249 131 20 chr13 59650797 59651149 -60633163 - RLTR22_Mur LTR ERVK -1043 805 415 2 1040 460 194 38 19 chr13 59651208 59651313 -60632999 + RLTR23 LTR ERV1 324 430 0 2 1040 759 249 110 24 chr13 59651333 59651683 -60632629 - L1_Rod LINE L1 -52 5795 5429 2 1040 632 233 98 58 chr13 59651698 59651903 -60632409 + B3 SINE B2 1 213 -3 2 1040 507 250 29 29 chr13 59651949 59652089 -60632223 - RSINE1 SINE B4 -22 143 4 2 1040 261 184 12 0 chr13 59652089 59652147 -60632165 - L1_Mur2 LINE L1 -818 5482 5399 2 1040 2204 188 68 30 chr13 59652246 59652684 -60631628 + RLTR20A1 LTR ERVK 1 457 -94 2 1040 486 0 0 0 chr13 59652684 59652738 -60631574 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1040 2204 188 68 30 chr13 59652738 59652830 -60631482 + RLTR20A1 LTR ERVK 458 550 -1 2 1040 272 282 0 14 chr13 59653935 59654007 -60630305 - RSINE1 SINE B4 -90 75 5 2 1040 291 300 83 15 chr13 59654149 59654281 -60630031 - Charlie1a DNA MER1_type -970 485 345 2 1040 375 274 111 16 chr13 59654297 59654423 -60629889 + RSINE1 SINE B4 14 151 -14 2 1040 576 242 54 31 chr13 59654663 59654885 -60629427 + Charlie1a DNA MER1_type 744 970 -485 2 1040 641 25 0 0 chr13 59654887 59654967 -60629345 + B1_Mm SINE Alu 59 138 -9 2 1040 827 123 65 7 chr13 59654998 59655137 -60629175 + B1_Mur4 SINE Alu 3 149 -1 2 1040 305 216 100 73 chr13 59655403 59655513 -60628799 + Charlie1a DNA MER1_type 1174 1286 -169 2 1040 824 123 315 0 chr13 59655951 59656113 -60628199 + B3 SINE B2 1 213 -3 2 1040 823 213 77 53 chr13 59657301 59657457 -60626855 + B3 SINE B2 2 166 -50 2 1040 192 125 0 0 chr13 59657457 59657489 -60626823 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1040 823 213 77 53 chr13 59657489 59657540 -60626772 + B3 SINE B2 167 214 -2 2 1040 21 36 0 0 chr13 59658542 59658570 -60625742 + GC_rich Low_complexity Low_complexity 1 28 0 2 1040 41 21 0 0 chr13 59658754 59658802 -60625510 + GC_rich Low_complexity Low_complexity 1 48 0 2 1040 350 74 19 0 chr13 59658855 59658909 -60625403 + (CGGGG)n Simple_repeat Simple_repeat 3 57 0 2 1040 507 102 0 0 chr13 59661096 59661184 -60623128 + (GA)n Simple_repeat Simple_repeat 1 88 0 2 1040 639 235 0 29 chr13 59661184 59661324 -60622988 - B1_Mur4 SINE Alu -12 138 3 2 1040 355 321 36 0 chr13 59661410 59661522 -60622790 + RSINE1 SINE B4 17 132 -33 2 1040 357 312 102 34 chr13 59662528 59662704 -60621608 - ID_B1 SINE B4 -8 216 29 2 1040 376 340 138 41 chr13 59663234 59663430 -60620882 - LTR41 LTR ERVL -233 535 321 2 1040 327 303 19 42 chr13 59663474 59663647 -60620665 - MERVL_2A-int LTR ERVL -1450 4311 4100 2 1040 535 323 94 62 chr13 59664122 59664495 -60619817 + MER21B LTR ERV1 23 407 -456 2 1040 325 299 38 38 chr13 59664548 59664680 -60619632 + ORR1E LTR MaLR 1 132 -227 2 1040 297 0 0 0 chr13 59665121 59665154 -60619158 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 2 1040 313 250 20 40 chr13 59665469 59665569 -60618743 - RMER5 LTR ERV1 -86 448 351 2 1040 245 262 103 79 chr13 59665602 59665788 -60618524 + B3 SINE B2 1 185 -10 2 1040 240 143 0 0 chr13 59666809 59666851 -60617461 + (CAGA)n Simple_repeat Simple_repeat 4 45 0 2 1040 396 329 86 29 chr13 59666851 59667095 -60617217 - RMER5 LTR ERV1 -76 458 201 2 1040 778 186 0 7 chr13 59667095 59667236 -60617076 + B1_Mur2 SINE Alu 1 140 -9 2 1040 526 263 61 31 chr13 59667286 59667482 -60616830 - RMER5 LTR ERV1 -331 203 2 2 1040 718 245 50 30 chr13 59667904 59668106 -60616206 - B3 SINE B2 -7 209 4 2 1040 952 143 52 62 chr13 59668209 59668403 -60615909 + B2_Mm2 SINE B2 1 192 -3 2 1040 1533 274 133 30 chr13 59668492 59669124 -60615188 + Lx8 LINE L1 6467 7163 -310 2 1040 235 288 17 0 chr13 59669165 59669224 -60615088 + RMER15 LTR ERVL 403 462 -113 2 1040 710 169 34 40 chr13 59669332 59669480 -60614832 - B1_Mus2 SINE Alu 0 147 1 2 1040 1151 55 14 0 chr13 59669887 59670032 -60614280 + B1_Mus1 SINE Alu 2 148 0 2 1040 396 59 0 0 chr13 59670035 59670086 -60614226 + (GGA)n Simple_repeat Simple_repeat 2 52 0 2 1040 210 71 0 0 chr13 59670088 59670116 -60614196 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2 1040 577 159 28 0 chr13 59670457 59670564 -60613748 - ORR1C2 LTR MaLR 0 384 275 2 1040 371 205 84 0 chr13 59670567 59670650 -60613662 + ORR1B2 LTR MaLR 1 90 -277 2 1040 1620 180 62 9 chr13 59671725 59672062 -60612250 + ORR1B2 LTR MaLR 13 367 0 2 1040 1203 144 28 9 chr13 59672144 59672361 -60611951 - RMER6D LTR ERVK 0 720 500 2 1040 225 0 0 0 chr13 59672404 59672429 -60611883 + (ATTTG)n Simple_repeat Simple_repeat 2 26 0 2 1040 3966 115 110 29 chr13 59673660 59674359 -60609953 + RMER6A LTR ERVK 1 756 0 2 1040 2008 171 34 45 chr13 59674519 59674937 -60609375 + MTC LTR MaLR 1 413 -8 2 1040 896 186 109 0 chr13 59675072 59675255 -60609057 - ORR1B1 LTR MaLR -110 284 82 2 1040 300 154 0 0 chr13 59675271 59675323 -60608989 + (TA)n Simple_repeat Simple_repeat 1 52 0 2 1040 266 268 33 67 chr13 59675633 59675753 -60608559 + PB1D10 SINE Alu 2 117 0 2 1040 25 0 0 0 chr13 59675905 59675930 -60608382 + AT_rich Low_complexity Low_complexity 1 25 0 2 1040 1530 72 0 5 chr13 59676063 59676258 -60608054 + B2_Mm2 SINE B2 2 195 0 2 1040 885 148 231 0 chr13 59676261 59676430 -60607882 - B3 SINE B2 -6 210 3 2 1040 1083 279 24 43 chr13 59676459 59676834 -60607478 - ORR1D2 LTR MaLR 0 370 3 2 1040 352 286 224 6 chr13 59676958 59677137 -60607175 + B4 SINE B4 16 233 -59 2 1040 378 122 281 0 chr13 59677142 59677224 -60607088 + URR1A DNA MER1_type 2 106 -120 2 1040 234 0 0 0 chr13 59677267 59677293 -60607019 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1040 947 64 28 35 chr13 59677293 59677438 -60606874 - B2_Mm2 SINE B2 -51 144 1 2 1040 616 173 8 8 chr13 59677439 59677567 -60606745 + URR1A DNA MER1_type 93 220 -6 2 1040 1063 201 57 104 chr13 59677872 59678284 -60606028 + MT2B LTR ERVL 23 546 -55 2 1040 315 104 0 0 chr13 59678284 59678332 -60605980 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 2 1040 1063 247 12 51 chr13 59678332 59678381 -60605931 + MT2B LTR ERVL 547 595 -6 2 1040 451 271 67 56 chr13 59678439 59678619 -60605693 - B3A SINE B2 -16 182 1 2 1040 219 186 0 0 chr13 59678793 59678836 -60605476 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1040 22 0 0 0 chr13 59679386 59679408 -60604904 + AT_rich Low_complexity Low_complexity 1 22 0 2 1040 1174 226 186 20 chr13 59680199 59680655 -60603657 + RMER4B LTR ERVK 17 548 -37 2 1040 1369 204 40 42 chr13 59680738 59681117 -60603195 + RMER17C LTR ERVK 1 378 -32 2 1040 931 131 0 20 chr13 59681313 59681461 -60602851 - B1_Mur2 SINE Alu 0 149 5 2 1040 537 162 50 0 chr13 59682046 59682145 -60602167 - B1_Mur2 SINE Alu 0 149 46 2 1040 422 181 12 0 chr13 59682233 59682316 -60601996 - B1_Mm SINE Alu 0 147 64 2 1040 602 159 0 26 chr13 59682312 59682428 -60601884 - B1_Mur1 SINE Alu -22 127 15 2 1040 397 218 8 83 chr13 59682452 59682572 -60601740 - B3A SINE B2 0 198 88 2 1040 1160 189 128 8 chr13 59682758 59683024 -60601288 + ORR1C1 LTR MaLR 1 298 -80 2 1040 217 148 65 16 chr13 59683027 59683089 -60601223 + (TTAA)n Simple_repeat Simple_repeat 1 65 0 2 1040 328 111 0 0 chr13 59683107 59683161 -60601151 + ORR1C1 LTR MaLR 306 359 -8 2 1040 270 284 0 69 chr13 59683613 59683700 -60600612 + PB1D10 SINE Alu 37 117 0 2 1040 268 209 132 0 chr13 59684709 59684800 -60599512 + MER2 DNA MER2_type 123 225 -120 2 1040 351 0 0 0 chr13 59684856 59684895 -60599417 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1040 32 0 0 0 chr13 59684913 59684945 -60599367 + AT_rich Low_complexity Low_complexity 1 32 0 2 1040 1224 54 0 0 chr13 59684950 59685098 -60599214 - B1_Mus1 SINE Alu 0 148 1 2 1040 1256 104 54 5 chr13 59685101 59685285 -60599027 - B2_Mm2 SINE B2 -1 194 2 2 1040 413 273 78 17 chr13 59685293 59685472 -60598840 - B2_Mm2 SINE B2 -3 192 3 2 1040 1290 204 119 25 chr13 59685804 59686206 -60598106 + RMER10A LTR ERVL 1 440 -2 2 1040 25 65 0 0 chr13 59686736 59686782 -60597530 + GC_rich Low_complexity Low_complexity 1 46 0 3 1040 203 125 25 0 chr13 59687716 59687756 -60596556 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 3 1040 198 0 0 0 chr13 59687767 59687789 -60596523 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1040 253 250 192 0 chr13 59687803 59687907 -60596405 - ID_B1 SINE B4 -2 222 99 3 1040 353 301 35 52 chr13 59688037 59688209 -60596103 - B3A SINE B2 -3 195 27 3 1040 231 250 43 14 chr13 59688819 59688888 -60595424 + FAM SINE Alu 160 230 -81 3 1040 1364 301 100 68 chr13 59690052 59691321 -60592991 - L1_Rod LINE L1 -13 5834 4555 3 1040 829 204 388 20 chr13 59691346 59691590 -60592722 + MTD LTR MaLR 1 334 -85 3 1040 2280 88 49 0 chr13 59691602 59691910 -60592402 - ORR1A2 LTR MaLR 0 327 5 3 1040 10240 126 83 30 chr13 59691914 59693658 -60590654 - ORR1A2-int LTR MaLR 0 1963 98 3 1040 1152 75 0 7 chr13 59693658 59693806 -60590506 + B1_Mus2 SINE Alu 1 147 0 3 1040 10240 126 83 30 chr13 59693806 59693925 -60590387 - ORR1A2-int LTR MaLR -1866 97 1 3 1040 2124 98 3 0 chr13 59693929 59694247 -60590065 - ORR1A2 LTR MaLR -8 319 1 3 1040 280 159 38 19 chr13 59694247 59694316 -60589996 + MTD LTR MaLR 286 405 -14 3 1040 766 216 31 26 chr13 59694342 59694537 -60589775 + B3 SINE B2 4 199 -17 3 1040 644 158 152 0 chr13 59694555 59694713 -60589599 - B2_Mm2 SINE B2 -2 193 12 3 1040 453 215 278 2 chr13 59694737 59694913 -60589399 - MTD LTR MaLR -5 414 182 3 1040 308 146 18 0 chr13 59694931 59694986 -60589326 + MTC LTR MaLR 65 120 -301 3 1040 822 53 0 17 chr13 59695008 59695123 -60589189 - B1_Mus1 SINE Alu 0 148 36 3 1040 1152 140 100 17 chr13 59695110 59695349 -60588963 + MTC LTR MaLR 163 421 0 3 1040 451 259 114 32 chr13 59695409 59695804 -60588508 - L1_Rod LINE L1 -3707 2140 1695 3 1040 655 96 29 0 chr13 59696319 59696423 -60587889 - B2_Mm2 SINE B2 -88 107 1 3 1040 198 103 0 0 chr13 59696513 59696542 -60587770 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1040 258 273 123 8 chr13 59697231 59697353 -60586959 - MER5A DNA MER1_type -28 161 26 3 1040 644 162 78 117 chr13 59697814 59697968 -60586344 - B1_Mus1 SINE Alu 0 148 1 3 1040 420 176 303 0 chr13 59698418 59698568 -60585744 + B4A SINE B4 7 214 -78 3 1040 2916 71 2 27 chr13 59698628 59699034 -60585278 + MTA_Mm LTR MaLR 1 396 0 3 1040 1352 71 16 26 chr13 59699625 59699814 -60584498 - B2_Mm2 SINE B2 -7 188 2 3 1040 362 293 69 0 chr13 59699863 59699979 -60584333 + ID_B1 SINE B4 85 208 -16 3 1040 1246 48 0 0 chr13 59700571 59700716 -60583596 + B1_Mus2 SINE Alu 1 145 -2 3 1040 24 32 0 0 chr13 59700989 59701020 -60583292 + AT_rich Low_complexity Low_complexity 1 31 0 3 1040 1749 172 85 9 chr13 59703485 59703826 -60580486 - ORR1B2 LTR MaLR 0 367 1 3 1040 2331 131 176 4 chr13 59704084 59704574 -60579738 + RMER4B LTR ERVK 1 574 -11 3 1040 336 344 60 0 chr13 59704939 59705090 -60579222 + L2 LINE L2 1276 1435 -1984 3 1040 355 254 87 52 chr13 59705222 59705451 -60578861 - Lx7 LINE L1 -4 7692 7456 3 1040 1672 161 122 12 chr13 59705486 59705813 -60578499 - Lx7 LINE L1 -336 7360 6998 3 1040 712 196 93 26 chr13 59706098 59706292 -60578020 - MTC LTR MaLR -137 284 78 3 1040 321 26 0 0 chr13 59706302 59706340 -60577972 + (TC)n Simple_repeat Simple_repeat 2 39 0 3 1040 753 67 0 9 chr13 59706340 59706446 -60577866 - B1_Mus2 SINE Alu -1 146 42 3 1040 265 212 0 43 chr13 59706486 59706497 -60577815 - ID_B1 SINE B4 -77 147 82 3 1040 381 86 17 0 chr13 59706497 59706555 -60577757 - PB1D9 SINE Alu -61 59 1 3 1040 332 203 27 0 chr13 59706555 59706629 -60577683 - MTC LTR MaLR -342 77 2 3 1040 1265 169 86 26 chr13 59706629 59706923 -60577389 - MTD LTR MaLR -105 314 3 3 1040 288 293 123 1 chr13 59706928 59707109 -60577203 - L2a LINE L2 -35 3391 3223 3 1040 575 180 14 63 chr13 59707176 59707318 -60576994 + B1_Mus1 SINE Alu 1 135 -13 3 1040 463 188 41 4 chr13 59707593 59707730 -60576582 + PB1D9 SINE Alu 14 161 -153 3 1040 447 275 8 0 chr13 59708836 59708956 -60575356 - B1_Mur1 SINE Alu -27 122 2 3 1040 640 179 313 24 chr13 59709034 59709200 -60575112 - B3 SINE B2 -2 214 1 3 1040 198 170 0 0 chr13 59710461 59710495 -60573817 + T-rich Low_complexity Low_complexity 20 53 0 3 1040 841 78 139 0 chr13 59710495 59710624 -60573688 - B1_Mus2 SINE Alu 0 147 1 3 1040 198 170 0 0 chr13 59710624 59710642 -60573670 + T-rich Low_complexity Low_complexity 2 19 0 3 1040 189 74 0 0 chr13 59711528 59711555 -60572757 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1040 482 188 133 52 chr13 59711579 59711714 -60572598 - B1_Mur4 SINE Alu -1 149 4 3 1040 538 281 81 5 chr13 59711908 59712094 -60572218 + B3 SINE B2 9 208 -8 3 1040 976 188 35 5 chr13 59712226 59712424 -60571888 + B3 SINE B2 8 211 -5 3 1040 1178 87 52 6 chr13 59712602 59712775 -60571537 + B2_Mm2 SINE B2 1 181 -14 3 1040 25 51 0 0 chr13 59713912 59713951 -60570361 + AT_rich Low_complexity Low_complexity 1 39 0 3 1040 274 269 36 63 chr13 59714531 59714642 -60569670 - ID_B1 SINE B4 0 224 117 3 1040 377 271 0 0 chr13 59714966 59715051 -60569261 + PB1D10 SINE Alu 23 107 -10 3 1040 378 284 27 18 chr13 59715568 59715679 -60568633 + B4A SINE B4 173 284 -8 3 1040 1552 234 55 39 chr13 59715896 59716389 -60567923 - RLTR11A LTR ERVK -21 507 7 3 1040 1521 150 116 0 chr13 59716507 59716801 -60567511 + MTC LTR MaLR 43 370 -51 3 1040 454 267 55 50 chr13 59717620 59717801 -60566511 - B3A SINE B2 -15 183 2 3 1040 4040 24 0 0 chr13 59718225 59718678 -60565634 + MERVL-int LTR ERVL 1102 1554 -3931 3 1040 339 113 0 0 chr13 59718678 59718731 -60565581 + MTB LTR MaLR 348 400 0 3 1040 538 218 64 8 chr13 59718991 59719116 -60565196 + B3 SINE B2 80 211 -5 3 1040 256 327 116 41 chr13 59719752 59719924 -60564388 - LTR16A1 LTR ERVL -5 451 267 3 1040 216 67 0 0 chr13 59721567 59721597 -60562715 + (GTTTG)n Simple_repeat Simple_repeat 3 32 0 3 1040 486 156 229 0 chr13 59721614 59721723 -60562589 - B1_Mm SINE Alu -1 146 13 3 1040 643 174 391 0 chr13 59721734 59721987 -60562325 - RLTR24 LTR ERV1 -177 352 1 3 1040 247 280 10 51 chr13 59722201 59722299 -60562013 + MLT1A LTR MaLR 7 100 -274 3 1040 838 73 71 24 chr13 59722509 59722636 -60561676 - B2_Mm2 SINE B2 -13 182 50 3 1040 222 239 0 0 chr13 59722714 59722760 -60561552 + ID4 SINE ID 22 67 -16 3 1040 1341 207 186 8 chr13 59722973 59723328 -60560984 - MTC LTR MaLR -3 418 1 3 1040 305 287 57 38 chr13 59725145 59725250 -60559062 + PB1D7 SINE Alu 1 107 -13 3 1040 272 91 23 0 chr13 59725252 59725296 -60559016 + (TCTA)n Simple_repeat Simple_repeat 1 45 0 3 1040 248 278 23 0 chr13 59726043 59726120 -60558192 + PB1D10 SINE Alu 26 107 -13 3 1040 287 250 64 64 chr13 59726433 59726527 -60557785 - PB1 SINE Alu -3 124 31 3 1040 226 338 0 0 chr13 59727199 59727276 -60557036 - RSINE1 SINE B4 -87 78 2 3 1040 381 290 60 15 chr13 59728234 59728367 -60555945 + RSINE1 SINE B4 3 141 -24 3 1040 23 33 0 0 chr13 59728691 59728721 -60555591 + AT_rich Low_complexity Low_complexity 1 30 0 3 1040 180 97 0 0 chr13 59729006 59729037 -60555275 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1040 240 287 42 100 chr13 59729345 59729465 -60554847 - MT2_Mm LTR ERVL -159 334 222 3 1040 280 208 0 0 chr13 59729421 59729469 -60554843 - PB1D10 SINE Alu -69 48 1 3 1040 253 245 0 0 chr13 59729425 59729474 -60554838 - ID_B1 SINE B4 -99 125 77 3 1040 1295 58 13 7 chr13 59730414 59730601 -60553711 + B2_Mm2 SINE B2 2 189 -4 3 1040 789 167 135 36 chr13 59731008 59731201 -60553111 - Lx9 LINE L1 -52 7592 7381 3 1040 1381 98 0 40 chr13 59731669 59731871 -60552441 + B2_Mm2 SINE B2 1 194 -1 3 1040 366 282 19 28 chr13 59732206 59732312 -60552000 - PB1D7 SINE Alu -15 105 1 3 1040 491 132 0 0 chr13 59732970 59733046 -60551266 + PB1D9 SINE Alu 45 120 0 3 1040 232 257 146 9 chr13 59733386 59733496 -60550816 - L2 LINE L2 -550 2869 2745 3 1040 203 179 161 0 chr13 59733540 59733596 -60550716 - L2 LINE L2 -819 2600 2536 3 1040 402 223 95 35 chr13 59733657 59733773 -60550539 - B1F SINE Alu 0 149 27 3 1040 1472 133 251 0 chr13 59734817 59735132 -60549180 - ORR1B1 LTR MaLR 0 394 1 3 1040 849 311 23 51 chr13 59735155 59735476 -60548836 - B4A SINE B4 0 292 1 3 1040 320 266 108 18 chr13 59736226 59736337 -60547975 + ID_B1 SINE B4 95 215 -9 3 1040 239 239 26 78 chr13 59736906 59736983 -60547329 - ID4 SINE ID -9 74 2 3 1040 489 262 8 24 chr13 59738037 59738162 -60546150 - B1F SINE Alu -9 140 18 3 1040 2108 56 4 7 chr13 59739971 59740240 -60544072 + L1_Mus1 LINE L1 6300 6567 0 3 1040 273 29 0 0 chr13 59740312 59740346 -60543966 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1040 180 179 0 0 chr13 59741264 59741303 -60543009 + (CCCG)n Simple_repeat Simple_repeat 3 41 0 3 1040 789 186 0 58 chr13 59741799 59741953 -60542359 - B1_Mus2 SINE Alu -2 145 1 3 1040 430 223 32 97 chr13 59741979 59742103 -60542209 + ID_B1 SINE B4 78 193 -31 3 1040 457 276 68 8 chr13 59742166 59742283 -60542029 + ID_B1 SINE B4 100 223 -1 3 1040 790 174 27 40 chr13 59742422 59742572 -60541740 + B1_Mur2 SINE Alu 2 149 0 3 1040 3727 133 94 22 chr13 59742856 59743526 -60540786 + MTC-int LTR MaLR 423 1140 -118 3 1040 480 297 227 12 chr13 59744119 59744688 -60539624 + L1MCa LINE L1 526 1216 -5292 3 1040 1367 75 32 0 chr13 59744868 59745054 -60539258 + B2_Mm2 SINE B2 2 193 -2 3 1040 366 191 0 0 chr13 59745054 59745122 -60539190 + L1MCa LINE L1 1308 1375 -5133 3 1040 693 257 48 13 chr13 59745184 59745413 -60538899 + L1MCa LINE L1 2872 3108 -3213 3 1040 731 142 0 0 chr13 59745414 59745520 -60538792 + B1_Mur2 SINE Alu 18 123 -26 4 1040 611 270 51 20 chr13 59745591 59745886 -60538426 + L1MCa LINE L1 3090 3393 -2928 3 1040 1501 63 16 10 chr13 59745894 59746073 -60538239 + B2_Mm2 SINE B2 2 183 -12 4 1040 522 0 0 0 chr13 59746073 59746131 -60538181 + (GAAA)n Simple_repeat Simple_repeat 2 59 0 4 1040 1501 63 16 10 chr13 59746131 59746144 -60538168 + B2_Mm2 SINE B2 184 195 0 4 1040 612 341 126 54 chr13 59746837 59747488 -60536824 + MER21B LTR ERV1 36 733 -130 4 1040 302 294 137 0 chr13 59748863 59748965 -60535347 + B1F SINE Alu 25 140 -9 4 1040 396 314 101 13 chr13 59749182 59749340 -60534972 - MER20 DNA MER1_type -19 200 29 4 1040 268 235 92 23 chr13 59749775 59749862 -60534450 + PB1D10 SINE Alu 25 117 0 4 1040 839 261 30 0 chr13 59750382 59750581 -60533731 - B3 SINE B2 -10 206 2 4 1040 198 0 0 0 chr13 59750693 59750715 -60533597 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1040 490 255 57 82 chr13 59751078 59751097 -60533215 + B4 SINE B4 67 81 -211 4 1040 875 172 35 0 chr13 59751097 59751242 -60533070 + B1_Mur4 SINE Alu 1 150 0 4 1040 324 0 0 0 chr13 59751248 59751284 -60533028 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1040 695 261 33 0 chr13 59751449 59751602 -60532710 - RSINE1 SINE B4 -6 159 2 4 1040 446 276 229 9 chr13 59754737 59754960 -60529352 - RMER15 LTR ERVL -5 570 299 4 1040 219 88 0 0 chr13 59755952 59755986 -60528326 + (GGGA)n Simple_repeat Simple_repeat 2 35 0 4 1040 377 342 81 0 chr13 59756971 59757120 -60527192 - RMER15 LTR ERVL -44 531 371 4 1040 349 348 7 32 chr13 59757382 59757532 -60526780 + MTE2b LTR MaLR 1 151 -228 4 1040 239 163 61 0 chr13 59757515 59757564 -60526748 + MTE2b LTR MaLR 270 321 -58 4 1040 788 188 176 38 chr13 59757769 59757797 -60526515 + ORR1C1 LTR MaLR 9 45 -333 4 1040 351 0 0 0 chr13 59757797 59757836 -60526476 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1040 788 188 176 38 chr13 59757836 59758017 -60526295 + ORR1C1 LTR MaLR 46 247 -131 4 1040 631 193 36 15 chr13 59758116 59758253 -60526059 + RMER15 LTR ERVL 422 561 -14 4 1040 233 254 36 0 chr13 59758964 59759019 -60525293 + PB1D7 SINE Alu 7 63 -57 4 1040 550 268 0 0 chr13 59759118 59759230 -60525082 + B1F SINE Alu 1 112 -37 4 1040 241 141 213 53 chr13 59759243 59759318 -60524994 + B3A SINE B2 1 87 -111 4 1040 238 281 80 104 chr13 59759270 59759520 -60524792 + B4A SINE B4 49 292 0 4 1040 269 167 0 0 chr13 59761110 59761152 -60523160 - PB1 SINE Alu -30 97 56 4 1040 2556 86 0 0 chr13 59761864 59762191 -60522121 + ORR1A2 LTR MaLR 1 327 0 4 1040 748 274 19 5 chr13 59762320 59762533 -60521779 + B3 SINE B2 1 216 0 4 1040 274 297 65 1 chr13 59763812 59763905 -60520407 + PB1D10 SINE Alu 11 110 -10 4 1040 1055 212 19 10 chr13 59764181 59764390 -60519922 + B3 SINE B2 1 211 -5 4 1040 498 157 12 0 chr13 59764505 59764588 -60519724 + B1_Mur3 SINE Alu 65 148 -1 4 1040 288 210 290 0 chr13 59765323 59765414 -60518898 - MER3 DNA MER1_type -39 170 63 4 1040 246 207 121 24 chr13 59765849 59765973 -60518339 - MER31B LTR ERV1 -150 316 181 4 1040 1550 208 29 62 chr13 59766080 59766464 -60517848 - MTD LTR MaLR 0 419 49 4 1040 369 0 0 0 chr13 59767135 59767176 -60517136 + (TC)n Simple_repeat Simple_repeat 1 41 0 4 1040 396 0 0 0 chr13 59767176 59767219 -60517093 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1040 254 242 16 0 chr13 59768290 59768352 -60515960 - PB1D10 SINE Alu -12 105 43 4 1040 527 237 0 50 chr13 59768482 59768602 -60515710 - PB1D7 SINE Alu 0 120 7 4 1040 233 287 49 78 chr13 59768515 59768617 -60515695 - B4 SINE B4 -113 179 81 4 16 639 254 21 0 chr13 59768787 59768929 -60515383 - B1_Mur3 SINE Alu -2 147 3 4 1041 268 224 0 0 chr13 59768935 59768993 -60515319 + GA-rich Low_complexity Low_complexity 1 58 0 4 1041 836 182 0 34 chr13 59769049 59769197 -60515115 + B1_Mur4 SINE Alu 1 143 -7 4 1041 460 208 58 8 chr13 59769288 59769409 -60514903 + MTD LTR MaLR 5 131 -288 4 1041 449 251 59 51 chr13 59769415 59769671 -60514641 - L1M3 LINE L1 -1676 4464 4207 4 1041 1065 233 102 11 chr13 59769685 59769950 -60514362 + MTD LTR MaLR 128 416 -3 4 1041 252 300 123 12 chr13 59770154 59770235 -60514077 + MER58A DNA MER1_type 1 90 -134 4 1041 250 242 286 0 chr13 59770521 59770612 -60513700 + PB1D10 SINE Alu 1 117 0 4 1041 890 191 13 0 chr13 59771015 59771167 -60513145 - B3 SINE B2 -56 160 7 4 1041 184 229 262 0 chr13 59771182 59771243 -60513069 + MER5A DNA MER1_type 6 82 -107 4 1041 236 252 114 92 chr13 59771922 59772053 -60512259 + MLT1F1 LTR MaLR 272 405 -164 4 1041 267 54 0 0 chr13 59772206 59772243 -60512069 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 4 1041 1221 49 0 0 chr13 59772676 59772820 -60511492 - B1_Mm SINE Alu 0 147 4 4 1041 1885 157 128 11 chr13 59772875 59773241 -60511071 - MTD LTR MaLR -9 410 2 4 1041 297 0 0 0 chr13 59773373 59773406 -60510906 + (A)n Simple_repeat Simple_repeat 1 33 0 4 1041 1072 65 175 0 chr13 59773935 59774089 -60510223 + B2_Mm2 SINE B2 1 181 -14 4 1041 902 71 0 8 chr13 59774089 59774217 -60510095 + (GAAA)n Simple_repeat Simple_repeat 3 129 0 4 1041 3307 36 13 8 chr13 59774304 59774698 -60509614 - MTA_Mm LTR MaLR 0 396 1 4 1041 348 24 0 0 chr13 59775033 59775074 -60509238 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1041 213 325 125 16 chr13 59775153 59775281 -60509031 - B4A SINE B4 -85 207 66 4 1041 21 0 0 0 chr13 59775427 59775448 -60508864 + AT_rich Low_complexity Low_complexity 1 21 0 4 1041 767 48 19 0 chr13 59775451 59775554 -60508758 + (GAAA)n Simple_repeat Simple_repeat 2 106 0 4 1041 415 292 11 28 chr13 59776877 59777053 -60507259 + G-rich Low_complexity Low_complexity 1 173 0 4 1041 518 219 26 0 chr13 59777299 59777413 -60506899 - B1F2 SINE Alu 0 149 33 4 1041 1365 209 53 48 chr13 59777775 59777894 -60506418 + ORR1D1 LTR MaLR 1 116 -258 4 1041 378 0 0 0 chr13 59777894 59777936 -60506376 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1041 1365 209 53 48 chr13 59777936 59778173 -60506139 + ORR1D1 LTR MaLR 117 358 -16 4 1041 1102 77 0 0 chr13 59778185 59778328 -60505984 + B1_Mus2 SINE Alu 5 147 0 4 1041 703 294 130 6 chr13 59778500 59778822 -60505490 + RMER15-int LTR ERVL 4217 4578 -421 4 1041 1232 89 11 6 chr13 59778941 59779121 -60505191 - B2_Mm2 SINE B2 -14 181 1 4 1041 1277 62 5 54 chr13 59779147 59779352 -60504960 + B2_Mm2 SINE B2 1 195 0 4 1041 1353 80 11 0 chr13 59779590 59779777 -60504535 - B2_Mm1t SINE B2 -4 189 1 4 1041 314 23 23 0 chr13 59779817 59779860 -60504452 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1041 236 311 139 15 chr13 59780068 59780205 -60504107 + Lx8 LINE L1 6945 7098 -375 4 1041 235 108 0 0 chr13 59780513 59780550 -60503762 - Lx8 LINE L1 -235 7238 7202 4 1041 335 285 90 68 chr13 59780702 59780770 -60503542 - MLT1D LTR MaLR -324 181 119 4 1041 2339 146 28 59 chr13 59780770 59781230 -60503082 + RLTR41 LTR ERV1 1 446 0 4 1041 335 285 90 68 chr13 59781230 59781338 -60502974 - MLT1D LTR MaLR -387 118 1 4 1041 929 76 29 248 chr13 59782022 59782268 -60502044 + B2_Mm2 SINE B2 4 195 0 4 1041 1156 207 54 89 chr13 59782573 59782998 -60501314 + RMER17C LTR ERVK 1 410 0 4 1041 1882 259 81 130 chr13 59783094 59784490 -60499822 + RMER17C-int LTR ERVK 81 2094 -4043 4 1041 1652 153 49 13 chr13 59784557 59784861 -60499451 + RLTR41 LTR ERV1 132 446 0 4 1041 10076 147 32 30 chr13 59784861 59786379 -60497933 + RMER17C-int LTR ERVK 1371 2866 -372 4 1041 387 0 0 0 chr13 59786379 59786422 -60497890 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1041 10076 147 32 30 chr13 59786422 59786767 -60497545 + RMER17C-int LTR ERVK 2867 3237 -1 4 1041 1198 223 58 65 chr13 59786768 59787181 -60497131 + RMER17C LTR ERVK 1 410 0 4 1041 250 200 138 0 chr13 59787232 59787312 -60497000 + MTEa LTR MaLR 275 365 -14 4 1041 809 153 20 20 chr13 59787520 59787667 -60496645 - B1_Mur4 SINE Alu -2 148 2 4 1041 317 168 8 186 chr13 59787562 59787686 -60496626 - MT2B LTR ERVL -344 257 156 4 1041 2157 91 32 0 chr13 59787773 59788082 -60496230 - ORR1A2 LTR MaLR -8 319 1 4 1041 534 70 0 0 chr13 59788215 59788286 -60496026 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 4 1041 504 192 10 0 chr13 59788348 59788447 -60495865 - PB1D9 SINE Alu -11 109 10 4 1041 259 323 23 31 chr13 59788373 59788501 -60495811 - B4 SINE B4 -123 169 43 4 1041 210 288 15 15 chr13 59789077 59789144 -60495168 - ID4_ SINE ID -1 82 16 4 1041 319 287 50 57 chr13 59789376 59789535 -60494777 - HAL1b LINE L1 -1377 632 475 4 1041 234 164 0 0 chr13 59790503 59790558 -60493754 + GA-rich Low_complexity Low_complexity 2 56 0 4 1041 192 135 0 0 chr13 59791155 59791192 -60493120 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 1041 262 297 27 0 chr13 59791356 59791430 -60492882 - ID4 SINE ID 0 83 8 4 1041 219 214 0 0 chr13 59791454 59791524 -60492788 + CT-rich Low_complexity Low_complexity 1 70 0 4 1041 223 298 0 0 chr13 59791550 59791607 -60492705 - PB1D10 SINE Alu -25 92 36 4 1041 1209 133 46 5 chr13 59792534 59792731 -60491581 + B3 SINE B2 2 206 -10 4 1041 261 0 0 0 chr13 59792745 59792774 -60491538 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1041 761 0 11 0 chr13 59793426 59793515 -60490797 + (GAA)n Simple_repeat Simple_repeat 2 91 0 4 1041 278 273 12 72 chr13 59794437 59794520 -60489792 + ID4_ SINE ID 5 82 -1 4 1041 199 114 0 43 chr13 59794626 59794672 -60489640 + GA-rich Low_complexity Low_complexity 3 46 0 4 1041 259 246 33 0 chr13 59796233 59796294 -60488018 - MTD LTR MaLR -8 411 349 4 1041 1901 112 49 10 chr13 59796293 59796600 -60487712 - ORR1A2 LTR MaLR -8 319 1 4 1041 838 244 139 9 chr13 59796600 59796898 -60487414 - MTD LTR MaLR -62 357 5 4 1041 1077 56 0 6 chr13 59797524 59797685 -60486627 - MusHAL1 LINE L1 -627 2085 1926 4 1041 198 0 0 0 chr13 59797688 59797710 -60486602 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 5 1041 3846 76 14 30 chr13 59797725 59797935 -60486377 - L1_Mus4 LINE L1 -5 6631 6436 5 1041 1100 88 0 0 chr13 59797935 59798082 -60486230 + B1_Mm SINE Alu 1 147 0 5 1041 210 37 0 0 chr13 59798086 59798113 -60486199 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1041 3846 76 14 30 chr13 59798113 59798469 -60485843 - L1_Mus4 LINE L1 -201 6435 6074 5 1041 1124 83 0 0 chr13 59798474 59798631 -60485681 - B2_Mm2 SINE B2 -33 162 6 5 1041 186 43 0 0 chr13 59799574 59799597 -60484715 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 5 1041 1024 140 23 0 chr13 59799597 59799768 -60484544 - B2_Mm1t SINE B2 -13 180 6 5 1041 2966 70 28 0 chr13 59799782 59800170 -60484142 - MTB LTR MaLR -1 399 1 5 1041 921 104 189 0 chr13 59800956 59801120 -60483192 - B2_Mm2 SINE B2 0 195 1 5 1041 1570 31 0 30 chr13 59801134 59801335 -60482977 - B2_Mm2 SINE B2 0 195 1 5 1041 375 41 0 0 chr13 59801395 59801444 -60482868 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1041 745 255 65 0 chr13 59805646 59805846 -60478466 + B3 SINE B2 1 213 -3 5 1041 243 61 0 0 chr13 59805933 59805966 -60478346 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1041 832 177 11 0 chr13 59807042 59807217 -60477095 + CT-rich Low_complexity Low_complexity 4 180 0 5 1041 426 20 0 0 chr13 59808957 59809008 -60475304 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1041 192 40 0 0 chr13 59809068 59809093 -60475219 + (TC)n Simple_repeat Simple_repeat 1 25 0 5 1041 1193 107 17 6 chr13 59809093 59809272 -60475040 - B2_Mm2 SINE B2 -14 181 1 5 1041 1172 48 7 0 chr13 59809374 59809521 -60474791 + B1_Mus1 SINE Alu 1 148 0 5 1041 437 104 13 0 chr13 59809531 59809608 -60474704 + (GAAAA)n Simple_repeat Simple_repeat 3 80 0 5 1041 1276 240 29 54 chr13 59810077 59810726 -60473586 - RLTR18B LTR ERVK -89 527 1 5 1041 2919 83 5 0 chr13 59810754 59811152 -60473160 + MTB LTR MaLR 1 400 0 5 1041 1907 182 67 19 chr13 59812671 59813091 -60471221 + BGLII_B LTR ERVK 1 440 -1 5 1041 762 167 0 37 chr13 59813973 59814160 -60470152 + GA-rich Low_complexity Low_complexity 1 180 0 5 1041 234 215 10 31 chr13 59814148 59814244 -60470068 + G-rich Low_complexity Low_complexity 4 97 0 5 1041 931 152 11 0 chr13 59814266 59814444 -60469868 + GA-rich Low_complexity Low_complexity 1 180 0 5 1041 5573 101 83 17 chr13 59815765 59816663 -60467649 - RMER17B LTR ERVK 0 958 1 5 1041 216 179 0 0 chr13 59817443 59817482 -60466830 + GA-rich Low_complexity Low_complexity 1 39 0 5 1041 220 344 0 0 chr13 59817822 59817915 -60466397 + (CCCCAG)n Simple_repeat Simple_repeat 4 96 0 5 1041 6420 147 107 115 chr13 59820874 59821289 -60463023 - RLTR21 LTR ERVK 0 1572 1128 5 1041 468 0 0 0 chr13 59821289 59821341 -60462971 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1041 6420 147 107 115 chr13 59821341 59821798 -60462514 - RLTR21 LTR ERVK -445 1127 710 5 1041 1258 91 11 16 chr13 59821798 59821987 -60462325 + B2_Mm1t SINE B2 2 189 -4 5 1041 6420 147 107 115 chr13 59821987 59822699 -60461613 - RLTR21 LTR ERVK -863 709 1 5 1041 3184 50 2 0 chr13 59823339 59823737 -60460575 - MTB LTR MaLR -1 399 1 5 1041 686 153 48 0 chr13 59824485 59824520 -60459792 - B1_Mur2 SINE Alu 0 149 20 5 1041 292 161 48 155 chr13 59824520 59824609 -60459703 - MT2B LTR ERVL -337 264 185 5 1041 3413 23 0 0 chr13 59824609 59825005 -60459307 - MTA_Mm LTR MaLR 0 396 1 5 1041 292 161 48 155 chr13 59825005 59825018 -60459294 - MT2B LTR ERVL -417 184 173 5 1041 1133 127 61 38 chr13 59826486 59826699 -60457613 + MTC LTR MaLR 1 218 -203 5 1041 189 0 0 0 chr13 59826702 59826723 -60457589 + (CAG)n Simple_repeat Simple_repeat 2 22 0 5 1041 425 189 134 9 chr13 59826724 59826836 -60457476 + MTC LTR MaLR 287 412 -7 5 1041 518 43 14 0 chr13 59827209 59827278 -60457034 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 1041 558 307 32 59 chr13 59830819 59831245 -60453067 + MTD LTR MaLR 2 419 0 5 1041 1971 126 63 22 chr13 59835204 59835520 -60448792 - ORR1A4 LTR MaLR 0 329 1 5 1041 1991 107 9 62 chr13 59835605 59835945 -60448367 - RLTRETN_Mm LTR ERVK 0 322 1 5 1041 335 260 85 20 chr13 59836058 59836211 -60448101 - L1_Mur3 LINE L1 -879 5001 4839 5 1041 298 256 12 49 chr13 59836219 59836301 -60448011 - B4A SINE B4 -213 79 1 5 1041 258 333 0 0 chr13 59836436 59836514 -60447798 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 1041 371 285 167 74 chr13 59836699 59837010 -60447302 - Lx8 LINE L1 -245 7228 6889 5 1041 544 307 22 0 chr13 59837083 59837220 -60447092 - B4A SINE B4 -138 154 15 5 1041 519 99 20 10 chr13 59839452 59839554 -60444758 + (CA)n Simple_repeat Simple_repeat 2 104 0 5 1041 344 40 20 0 chr13 59839781 59839831 -60444481 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1041 342 273 218 13 chr13 59840369 59840525 -60443787 + B3A SINE B2 1 188 -10 5 1041 364 232 90 50 chr13 59840527 59840627 -60443685 + B1_Mur2 SINE Alu 24 127 -22 5 1041 274 228 73 37 chr13 59840708 59840790 -60443522 - Lx8 LINE L1 -648 6825 6741 5 1041 714 271 121 24 chr13 59840861 59841159 -60443153 - Lx8 LINE L1 -870 6603 6277 5 1041 542 254 28 28 chr13 59841158 59841300 -60443012 + Lx8 LINE L1 6799 6940 -533 5 1041 350 329 29 0 chr13 59841341 59841481 -60442831 + Lx8 LINE L1 7100 7243 -230 5 1041 1370 42 0 6 chr13 59841491 59841660 -60442652 + B2_Mm2 SINE B2 1 168 -27 5 1041 630 273 49 18 chr13 59841661 59841825 -60442487 - B3A SINE B2 -11 187 19 5 1041 403 297 172 15 chr13 59841825 59842023 -60442289 + Lx8 LINE L1 7236 7464 -9 5 1041 1016 314 62 3 chr13 59846317 59846675 -60437637 + MTE2b LTR MaLR 1 379 0 5 1041 1433 253 19 37 chr13 59846884 59847261 -60437051 - ORR1D2 LTR MaLR 0 370 1 5 1041 761 150 0 6 chr13 59848552 59848733 -60435579 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1041 551 211 0 11 chr13 59849137 59849319 -60434993 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1041 1186 75 0 0 chr13 59850294 59850433 -60433879 + B1_Mus2 SINE Alu 1 139 -8 5 1041 324 19 18 36 chr13 59850433 59850488 -60433824 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 5 1041 269 330 54 0 chr13 59850795 59850907 -60433405 - MIRc SINE MIR -45 223 106 5 1041 22 0 0 0 chr13 59851000 59851022 -60433290 + AT_rich Low_complexity Low_complexity 1 22 0 5 1041 299 247 165 0 chr13 59851069 59851154 -60433158 - B2_Mm2 SINE B2 -96 99 1 5 1041 1167 203 114 0 chr13 59851199 59851470 -60432842 + Lx5 LINE L1 6749 7050 0 5 1041 620 219 99 45 chr13 59851480 59851681 -60432631 + MTC-int LTR MaLR 1037 1248 -10 5 1041 863 239 31 49 chr13 59851687 59852004 -60432308 + MTC LTR MaLR 18 335 -84 5 1041 705 305 62 36 chr13 59852044 59852347 -60431965 - L1_Mur3 LINE L1 -1012 4868 4560 5 1041 2114 103 93 72 chr13 59852347 59852733 -60431579 + ORR1B1 LTR MaLR 1 394 0 5 1041 705 305 62 36 chr13 59852733 59852822 -60431490 - L1_Mur3 LINE L1 -1321 4559 4472 5 1041 2429 60 27 60 chr13 59852822 59853156 -60431156 + ORR1A2 LTR MaLR 1 323 -4 5 1041 705 305 62 36 chr13 59853156 59853290 -60431022 - L1_Mur3 LINE L1 -1409 4471 4327 5 1041 1617 37 21 0 chr13 59853305 59853494 -60430818 - B2_Mm1t SINE B2 0 193 1 5 1041 222 274 0 0 chr13 59853648 59853699 -60430613 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1041 801 159 214 9 chr13 59854116 59854320 -60429992 + ORR1D1 LTR MaLR 1 247 -147 5 1041 1040 129 57 23 chr13 59854490 59854665 -60429647 - B2_Mm2 SINE B2 -14 181 1 5 1041 310 352 134 4 chr13 59854698 59854929 -60429383 - MLT1C LTR MaLR -52 415 155 5 1041 333 94 203 0 chr13 59855975 59856039 -60428273 - B1_Mus2 SINE Alu -21 126 50 5 1041 446 221 147 0 chr13 59857044 59857139 -60427173 + PB1D10 SINE Alu 3 111 -6 5 1041 23 0 0 0 chr13 59857145 59857168 -60427144 + AT_rich Low_complexity Low_complexity 1 23 0 5 1041 222 283 0 16 chr13 59858863 59858924 -60425388 - B3A SINE B2 -115 83 24 5 1041 452 282 47 40 chr13 59859318 59859451 -60424861 + B3A SINE B2 31 163 -35 5 1041 288 53 0 0 chr13 59859451 59859489 -60424823 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1041 405 219 112 56 chr13 59859489 59859521 -60424791 + B3 SINE B2 167 205 -11 5 1041 277 245 155 10 chr13 59859568 59859671 -60424641 + RSINE1 SINE B4 8 125 -40 5 1041 228 246 49 0 chr13 59859717 59859778 -60424534 + PB1D10 SINE Alu 20 83 -34 5 1041 496 242 94 43 chr13 59860104 59860242 -60424070 + ID_B1 SINE B4 80 224 0 5 1041 250 243 95 78 chr13 59860427 59860543 -60423769 + PB1D7 SINE Alu 1 118 -2 5 1041 318 87 0 0 chr13 59860630 59860676 -60423636 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1041 377 307 0 0 chr13 59861076 59861164 -60423148 - PB1D10 SINE Alu -29 88 1 5 1041 207 204 0 0 chr13 59861164 59861208 -60423104 + T-rich Low_complexity Low_complexity 1 44 0 5 1041 411 238 0 12 chr13 59861296 59861377 -60422935 - B1_Mus2 SINE Alu -63 84 5 5 1041 266 338 0 0 chr13 59861314 59861385 -60422927 - B4A SINE B4 -140 152 82 5 1041 279 0 0 0 chr13 59861605 59861636 -60422676 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1041 1094 171 67 113 chr13 59861664 59861751 -60422561 - MTC LTR MaLR -151 270 210 5 1041 1240 115 15 54 chr13 59861751 59861954 -60422358 - B2_Mm2 SINE B2 0 195 1 5 1041 1094 171 67 113 chr13 59861954 59862149 -60422163 - MTC LTR MaLR -212 209 1 5 1041 263 340 0 55 chr13 59862588 59862600 -60421712 + ID SINE ID 70 75 -149 5 1041 399 314 43 21 chr13 59862600 59862740 -60421572 + B1F2 SINE Alu 1 143 -6 5 1041 2514 60 38 0 chr13 59863242 59863557 -60420755 + ORR1A2 LTR MaLR 1 327 0 5 1041 287 318 0 33 chr13 59863704 59863795 -60420517 + MER20 DNA MER1_type 54 141 -78 5 1041 248 227 76 0 chr13 59865124 59865151 -60419161 + B4 SINE B4 3 30 -262 5 1041 351 0 0 0 chr13 59865151 59865190 -60419122 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1041 248 227 76 0 chr13 59865190 59865228 -60419084 + B4 SINE B4 31 72 -220 5 1041 399 314 8 33 chr13 59865239 59865361 -60418951 + B4 SINE B4 168 286 -6 5 1041 212 0 36 0 chr13 59865513 59865541 -60418771 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1041 326 261 68 51 chr13 59865698 59865815 -60418497 + ORR1A3 LTR MaLR 22 140 -186 5 1041 796 78 0 0 chr13 59865718 59865821 -60418491 - MT2B2 LTR ERVL -282 302 200 5 1041 8902 62 3 21 chr13 59865828 59867054 -60417258 + ORR1A0-int LTR MaLR 1 1792 0 5 1041 440 211 21 43 chr13 59867084 59867178 -60417134 + PB1D10 SINE Alu 21 112 -5 6 1041 407 233 44 0 chr13 59867970 59868060 -60416252 + RSINE1 SINE B4 68 161 -4 6 1041 26 0 0 0 chr13 59868060 59868086 -60416226 + AT_rich Low_complexity Low_complexity 1 26 0 6 1041 352 282 41 118 chr13 59868165 59868386 -60415926 - B4 SINE B4 -82 210 7 6 1041 3538 104 100 4 chr13 59869120 59869649 -60414663 + MT2B2 LTR ERVL 1 580 -4 6 1041 192 269 139 61 chr13 59872108 59872223 -60412089 - L3 LINE CR1 -1565 2924 2801 6 1041 233 61 0 0 chr13 59872223 59872256 -60412056 - B1_Mm SINE Alu 0 147 115 6 1041 422 264 88 52 chr13 59874810 59874946 -60409366 - B1F1 SINE Alu -8 141 1 6 1041 261 0 0 0 chr13 59875383 59875412 -60408900 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1041 778 247 132 0 chr13 59877515 59877689 -60406623 + B3 SINE B2 10 206 -10 6 1041 4651 65 7 3 chr13 59878423 59879005 -60405307 + MT2B2 LTR ERVL 1 584 0 6 1041 265 335 130 27 chr13 59879518 59879702 -60404610 + L2a LINE L2 3224 3426 0 6 1041 857 242 109 38 chr13 59880938 59881204 -60403108 - B4 SINE B4 0 292 8 6 1041 969 164 31 36 chr13 59881237 59881433 -60402879 - B2_Mm2 SINE B2 0 195 1 6 1041 311 294 28 3 chr13 59881440 59881547 -60402765 - L1MDa LINE L1 -2924 3610 3506 6 1041 1095 108 0 7 chr13 59881547 59881696 -60402616 - B1_Mus1 SINE Alu 0 148 1 6 1041 305 297 0 73 chr13 59881696 59881726 -60402586 - L1MDa LINE L1 -4196 2437 2413 6 1041 420 270 118 8 chr13 59882225 59882352 -60401960 + B1F SINE Alu 1 141 -8 6 1041 456 283 8 16 chr13 59882720 59882842 -60401470 - PB1 SINE Alu -1 126 6 6 1041 796 211 200 0 chr13 59884162 59884342 -60399970 - B3 SINE B2 0 216 1 6 1041 553 185 57 65 chr13 59884525 59884713 -60399599 - B3 SINE B2 0 195 12 6 1041 355 274 148 5 chr13 59884724 59884849 -60399463 - B1F SINE Alu -1 148 11 6 1041 561 298 73 62 chr13 59885255 59885602 -60398710 + RLTR12B LTR ERVK 1 394 -134 6 1041 290 287 98 23 chr13 59885899 59886031 -60398281 + RLTR11A2 LTR ERVK 369 510 -17 6 1041 237 33 0 0 chr13 59886591 59886621 -60397691 + (CTG)n Simple_repeat Simple_repeat 3 32 0 6 1041 348 288 140 10 chr13 59886832 59887025 -60397287 + L1MA7 LINE L1 6011 6228 -63 6 1041 466 264 33 8 chr13 59887640 59887762 -60396550 + B1F SINE Alu 1 125 -24 6 1041 660 87 0 0 chr13 59888254 59888346 -60395966 + (TG)n Simple_repeat Simple_repeat 2 93 0 6 1041 29 0 0 0 chr13 59888814 59888843 -60395469 + AT_rich Low_complexity Low_complexity 1 29 0 6 1041 1317 20 0 0 chr13 59888843 59888991 -60395321 - B1_Mus1 SINE Alu 0 148 1 6 1041 268 281 88 117 chr13 59891075 59891097 -60393215 + MT2B LTR ERVL 151 211 -390 6 1041 390 228 206 0 chr13 59891097 59891189 -60393123 + B1_Mur1 SINE Alu 2 112 -37 6 1041 268 281 88 117 chr13 59891189 59891212 -60393100 + MT2B LTR ERVL 212 283 -318 6 1041 342 0 0 0 chr13 59891464 59891502 -60392810 + (CAA)n Simple_repeat Simple_repeat 2 39 0 6 1041 378 203 0 0 chr13 59891534 59891598 -60392714 + ID_B1 SINE B4 102 165 -59 6 1041 324 268 128 49 chr13 59891598 59891636 -60392676 + PB1D10 SINE Alu 21 130 -19 6 1041 237 271 0 0 chr13 59891914 59892058 -60392254 + (CA)n Simple_repeat Simple_repeat 2 145 0 6 1041 300 254 0 0 chr13 59892099 59892276 -60392036 + (CA)n Simple_repeat Simple_repeat 1 177 0 6 1041 772 169 6 75 chr13 59892611 59892771 -60391541 - B1_Mur3 SINE Alu 0 149 1 6 1041 221 279 14 56 chr13 59892822 59892894 -60391418 + ID_B1 SINE B4 88 156 -68 6 1041 279 0 0 0 chr13 59892926 59892957 -60391355 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1041 215 278 0 0 chr13 59892962 59893016 -60391296 + GA-rich Low_complexity Low_complexity 1 54 0 6 1041 397 257 93 28 chr13 59895057 59895165 -60389147 + PB1D10 SINE Alu 2 116 -1 6 1041 422 271 92 6 chr13 59895198 59895324 -60388988 + ID_B1 SINE B4 72 200 -24 6 1041 369 200 0 0 chr13 59895333 59895403 -60388909 + ID4 SINE ID 2 71 -12 6 1041 403 272 31 16 chr13 59895906 59896033 -60388279 + B1F1 SINE Alu 1 129 -20 6 1041 397 251 64 45 chr13 59896249 59896374 -60387938 - RSINE1 SINE B4 -39 126 1 6 1041 267 283 68 42 chr13 59897262 59897380 -60386932 - MER58A DNA MER1_type -62 162 42 6 1041 541 184 0 58 chr13 59897878 59897999 -60386313 - PB1D10 SINE Alu -2 115 2 6 1041 439 246 68 45 chr13 59898456 59898588 -60385724 - RSINE1 SINE B4 -29 136 2 6 1041 375 198 42 0 chr13 59899301 59899397 -60384915 + PB1D9 SINE Alu 12 111 -9 6 1041 235 261 0 0 chr13 59899703 59899749 -60384563 + PB1D9 SINE Alu 2 47 -73 6 1042 311 162 151 70 chr13 59900039 59900125 -60384187 + Lx8 LINE L1 7072 7164 -309 6 1042 539 250 13 71 chr13 59900766 59900921 -60383391 + RSINE1 SINE B4 1 146 -19 6 1042 261 83 0 0 chr13 59901295 59901331 -60382981 + (TCC)n Simple_repeat Simple_repeat 2 37 0 6 1042 936 231 19 9 chr13 59904240 59904450 -60379862 + MIRb SINE MIR 56 267 -1 6 1042 242 281 16 0 chr13 59904443 59904507 -60379805 + MIRb SINE MIR 133 197 -71 6 1042 318 307 26 0 chr13 59905338 59905452 -60378860 - MIR SINE MIR -132 130 14 6 1042 314 307 131 21 chr13 59905889 59906126 -60378186 + L1MA4A LINE L1 5635 5932 -371 6 1042 255 326 35 48 chr13 59906313 59906341 -60377971 + ID_B1 SINE B4 64 206 -18 6 1042 425 235 17 17 chr13 59906341 59906458 -60377854 + B1F SINE Alu 15 131 -18 6 1042 951 123 14 0 chr13 59906842 59906980 -60377332 + B1_Mur3 SINE Alu 9 148 -1 6 1042 293 208 112 56 chr13 59907440 59907547 -60376765 - MTE2b LTR MaLR -266 113 1 6 1042 252 59 0 0 chr13 59908507 59908541 -60375771 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1042 246 280 0 0 chr13 59908581 59908631 -60375681 - B1F1 SINE Alu -93 56 7 6 1042 384 262 61 69 chr13 59908749 59908880 -60375432 - B1F1 SINE Alu -6 143 14 6 1042 304 309 37 92 chr13 59908880 59908913 -60375399 - ID_B1 SINE B4 -6 218 64 6 1042 654 134 26 26 chr13 59909129 59909244 -60375068 + B2_Mm2 SINE B2 72 186 -9 6 1042 210 357 29 0 chr13 59909589 59909659 -60374653 - ID4 SINE ID -11 72 1 6 1042 413 222 78 29 chr13 59909813 59909915 -60374397 - PB1D10 SINE Alu -9 108 2 6 1042 1125 70 14 7 chr13 59910167 59910312 -60374000 - B1_Mus1 SINE Alu 0 148 3 6 1042 232 167 48 0 chr13 59910461 59910503 -60373809 + MT2C_Mm LTR ERVL 197 240 -235 6 1042 454 219 114 30 chr13 59910473 59910605 -60373707 + B1F2 SINE Alu 6 148 -1 6 1042 232 221 0 25 chr13 59910624 59910703 -60373609 + GA-rich Low_complexity Low_complexity 3 79 0 6 1042 862 191 21 32 chr13 59911020 59911209 -60373103 - B3 SINE B2 -3 213 27 6 1042 334 274 90 45 chr13 59911760 59911894 -60372418 + B1F SINE Alu 10 149 0 6 1042 614 335 13 1 chr13 59913333 59913540 -60370772 - B3A SINE B2 -3 213 3 6 1042 568 236 0 0 chr13 59913540 59913650 -60370662 - PB1D7 SINE Alu 0 120 11 6 1042 296 305 160 9 chr13 59913882 59913988 -60370324 + L2b LINE L2 3252 3373 -2 6 1042 522 288 6 67 chr13 59914079 59914258 -60370054 + B3A SINE B2 26 193 -5 6 1042 604 163 192 16 chr13 59914374 59914499 -60369813 - B1_Mur1 SINE Alu -1 148 2 6 1042 343 259 25 0 chr13 59914718 59914799 -60369513 - ID_B1 SINE B4 -51 173 91 6 1042 310 246 130 0 chr13 59914902 59914971 -60369341 - RSINE1 SINE B4 -85 80 3 6 1042 216 0 0 0 chr13 59914975 59914999 -60369313 + (TTA)n Simple_repeat Simple_repeat 2 25 0 6 1042 214 82 90 20 chr13 59915073 59915173 -60369139 + (TA)n Simple_repeat Simple_repeat 1 107 0 6 1042 21 36 0 0 chr13 59915342 59915370 -60368942 + AT_rich Low_complexity Low_complexity 1 28 0 6 1042 542 164 179 64 chr13 59915950 59916106 -60368206 + B3A SINE B2 9 182 -16 6 1042 258 243 29 0 chr13 59918296 59918366 -60365946 - ID4 SINE ID -10 73 2 6 1042 313 157 125 57 chr13 59919156 59919244 -60365068 + B3A SINE B2 1 94 -104 6 1042 229 300 33 0 chr13 59919472 59919532 -60364780 + RSINE1 SINE B4 2 63 -102 6 1042 584 259 26 55 chr13 59919532 59919678 -60364634 + B3 SINE B2 1 216 0 6 1042 395 299 74 31 chr13 59920547 59920565 -60363747 + ID_B1 SINE B4 56 224 0 6 1042 432 292 28 0 chr13 59920565 59920709 -60363603 + B1_Mur1 SINE Alu 2 149 0 6 1042 579 234 21 21 chr13 59921071 59921211 -60363101 - B1_Mur1 SINE Alu -9 140 1 6 1042 315 274 0 35 chr13 59921383 59921470 -60362842 - PB1D10 SINE Alu -22 95 12 6 1042 361 220 107 27 chr13 59921903 59922015 -60362297 + B1_Mur2 SINE Alu 22 142 -7 6 1042 200 180 19 39 chr13 59922463 59922515 -60361797 + CT-rich Low_complexity Low_complexity 3 53 0 6 1042 23 33 0 0 chr13 59924630 59924660 -60359652 + GC_rich Low_complexity Low_complexity 1 30 0 6 1042 1006 72 72 0 chr13 59924904 59925042 -60359270 + B1_Mus1 SINE Alu 1 148 0 6 1042 730 55 0 0 chr13 59925434 59925525 -60358787 + B1_Mus2 SINE Alu 57 147 0 6 1042 404 233 126 0 chr13 59925530 59925689 -60358623 - Lx4B LINE L1 -17 7041 6863 6 1042 436 239 126 35 chr13 59925823 59925966 -60358346 + B3A SINE B2 1 156 -42 6 1042 231 103 0 0 chr13 59925970 59926009 -60358303 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1042 512 235 187 16 chr13 59926503 59926685 -60357627 + B3 SINE B2 4 216 0 7 1042 882 221 21 16 chr13 59926714 59926907 -60357405 + B3A SINE B2 1 194 -4 7 1042 214 327 0 75 chr13 59927465 59927571 -60356741 + L2 LINE L2 2636 2733 -686 7 1042 306 256 103 0 chr13 59927819 59927897 -60356415 + B1F SINE Alu 1 86 -63 7 1042 198 71 0 0 chr13 59927898 59927926 -60356386 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1042 203 88 0 29 chr13 59927926 59927961 -60356351 + (AGGGGG)n Simple_repeat Simple_repeat 5 38 0 7 1042 458 274 77 0 chr13 59927966 59928083 -60356229 + B1F2 SINE Alu 24 149 0 7 1042 225 0 0 0 chr13 59928235 59928260 -60356052 + (TTG)n Simple_repeat Simple_repeat 3 27 0 7 1042 652 145 17 25 chr13 59928547 59928667 -60355645 - B1F SINE Alu -1 148 30 7 1042 7401 224 68 24 chr13 59928872 59930449 -60353863 - Lx6 LINE L1 -15 7445 5788 7 1042 4226 156 9 11 chr13 59930449 59931143 -60353169 + RLTR17 LTR ERVK 1 692 0 7 1042 7401 151 69 13 chr13 59931143 59932074 -60352238 - Lx6 LINE L1 -91 5789 4791 7 1042 4875 144 22 49 chr13 59932072 59933048 -60351264 + L1_Mur3 LINE L1 3253 4202 -1678 7 1042 423 0 0 0 chr13 59933071 59933118 -60351194 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 7 1042 1024 228 19 0 chr13 59933124 59933330 -60350982 - B3 SINE B2 -6 210 1 7 1042 207 123 53 27 chr13 59933469 59933544 -60350768 + (CAGA)n Simple_repeat Simple_repeat 4 80 0 7 1042 334 146 0 0 chr13 59933575 59933623 -60350689 + HAL1-3A_ME LINE L1 1975 2022 -836 7 1042 501 110 65 30 chr13 59933626 59933795 -60350517 + (CAGA)n Simple_repeat Simple_repeat 2 176 0 7 1042 207 214 0 0 chr13 59933811 59933881 -60350431 + (CA)n Simple_repeat Simple_repeat 2 71 0 7 1042 207 0 0 0 chr13 59934639 59934662 -60349650 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1042 561 329 0 0 chr13 59934664 59934801 -60349511 - B1F SINE Alu -12 137 1 7 1042 637 312 11 11 chr13 59934820 59934837 -60349475 - B3A SINE B2 -16 182 166 7 1042 800 63 0 9 chr13 59934837 59934949 -60349363 + (GA)n Simple_repeat Simple_repeat 1 111 0 7 1042 637 312 11 11 chr13 59934949 59935106 -60349206 - B3A SINE B2 -33 165 9 7 1042 1043 195 36 0 chr13 59935484 59935679 -60348633 - B3 SINE B2 -11 205 4 7 1042 611 178 0 9 chr13 59935685 59935793 -60348519 - ID_B1 SINE B4 0 224 118 7 1042 323 237 32 11 chr13 59935810 59935904 -60348408 - PB1D10 SINE Alu -8 109 16 7 1042 261 257 51 51 chr13 59935965 59936043 -60348269 + BC1_Mm scRNA scRNA 3 80 -72 7 1042 417 238 11 35 chr13 59936434 59936608 -60347704 + G-rich Low_complexity Low_complexity 2 171 0 7 1042 271 313 12 24 chr13 59936831 59937056 -60347256 + G-rich Low_complexity Low_complexity 1 222 0 7 1042 240 305 4 83 chr13 59937346 59937436 -60346876 - PB1 SINE Alu -59 90 2 7 1042 195 42 0 0 chr13 59938030 59938054 -60346258 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1042 49 0 0 0 chr13 59938157 59938206 -60346106 + AT_rich Low_complexity Low_complexity 1 49 0 7 1042 694 223 100 11 chr13 59938206 59938396 -60345916 - B3 SINE B2 -9 207 1 7 1042 394 226 58 42 chr13 59938401 59938521 -60345791 - B1F2 SINE Alu -5 144 23 7 1042 1215 62 0 0 chr13 59938779 59938925 -60345387 - B1_Mus2 SINE Alu 0 147 2 7 1042 21 0 0 0 chr13 59939401 59939422 -60344890 + AT_rich Low_complexity Low_complexity 1 21 0 7 1042 973 47 8 8 chr13 59939458 59939586 -60344726 + B1_Mus1 SINE Alu 21 148 0 7 1042 274 23 47 0 chr13 59939722 59939765 -60344547 + (CAAAAA)n Simple_repeat Simple_repeat 3 47 0 7 1042 1632 284 131 5 chr13 59939849 59940423 -60343889 + Lx8 LINE L1 6268 6913 -560 7 1042 359 131 16 0 chr13 59940433 59940494 -60343818 + B1_Mus2 SINE Alu 86 147 0 7 1042 4225 199 110 7 chr13 59940508 59941474 -60342838 + RMER1B Other Other 2 1066 0 7 1042 1280 121 19 33 chr13 59941593 59941806 -60342506 - RLTR31_Mm LTR ERVK -216 345 136 7 1042 539 254 23 67 chr13 59941882 59942066 -60342246 - B3A SINE B2 0 216 11 7 1042 2059 142 3 3 chr13 59943162 59943473 -60340839 - RLTR10E LTR ERVK 0 311 1 7 1042 433 299 39 19 chr13 59944193 59944363 -60339949 + L1MB4 LINE L1 5567 5739 -445 7 1042 754 174 362 21 chr13 59944436 59944676 -60339636 + MT2B LTR ERVL 18 339 -262 7 1042 32975 125 32 22 chr13 59944682 59949661 -60334651 + MERVL_2A-int LTR ERVL 427 5456 -305 7 1042 711 208 0 0 chr13 59949668 59949788 -60334524 - B3 SINE B2 -92 124 5 7 1042 1526 20 14 53 chr13 59949800 59950009 -60334303 - L1Md_F3 LINE L1 -1 6583 6383 7 1042 308 304 75 6 chr13 59950025 59950184 -60334128 + L1MB4 LINE L1 6012 6181 -2 7 1042 258 235 0 19 chr13 59950275 59950327 -60333985 + B3 SINE B2 20 70 -146 7 1042 1760 183 63 25 chr13 59950324 59950689 -60333623 + MTD LTR MaLR 41 419 0 7 1042 1540 137 0 17 chr13 59950793 59951023 -60333289 - URR1A DNA MER1_type 0 226 1 7 1042 384 22 0 0 chr13 59951586 59951631 -60332681 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1042 246 200 312 0 chr13 59952104 59952184 -60332128 + ID_B1 SINE B4 52 156 -68 7 1042 478 221 28 13 chr13 59952157 59952297 -60332015 + ID_B1 SINE B4 43 185 -107 7 1042 627 265 7 26 chr13 59952270 59952421 -60331891 + ID_B1 SINE B4 68 215 -9 7 1042 1780 154 127 53 chr13 59952451 59952862 -60331450 + RMER10A LTR ERVL 1 441 -1 7 1042 195 42 0 0 chr13 59952952 59952976 -60331336 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 7 1042 256 289 24 0 chr13 59953065 59953148 -60331164 + CT-rich Low_complexity Low_complexity 1 85 0 7 1042 247 191 0 0 chr13 59953741 59953788 -60330524 - B1F2 SINE Alu -96 53 7 7 1042 229 246 0 17 chr13 59953788 59953799 -60330513 - ID_B1 SINE B4 -90 134 78 7 1042 313 306 0 0 chr13 59953835 59953907 -60330405 - ID SINE ID -151 73 2 7 1042 317 263 200 46 chr13 59953923 59954098 -60330214 + B4 SINE B4 1 202 -22 7 1042 24 0 0 0 chr13 59954566 59954590 -60329722 + AT_rich Low_complexity Low_complexity 1 24 0 7 1042 404 213 202 9 chr13 59955694 59955803 -60328509 + ID_B1 SINE B4 94 223 -1 7 1042 1039 256 5 0 chr13 59956132 59956355 -60327957 - ID_B1 SINE B4 0 224 1 7 1042 300 302 31 10 chr13 59956370 59956467 -60327845 + ID_B1 SINE B4 81 179 -45 7 1042 966 343 86 4 chr13 59956602 59957105 -60327207 - Lx8 LINE L1 -151 7322 6779 7 1042 813 113 188 19 chr13 59957117 59957271 -60327041 + B2_Mm1t SINE B2 3 182 -11 7 1042 327 88 49 20 chr13 59957281 59957376 -60326936 + B2_Mm2 SINE B2 47 179 -16 7 1042 657 0 0 0 chr13 59957376 59957449 -60326863 + (GAA)n Simple_repeat Simple_repeat 1 73 0 7 1042 426 256 85 8 chr13 59957473 59957591 -60326721 - Lx9 LINE L1 -804 6840 6714 7 1042 201 39 0 0 chr13 59957677 59957703 -60326609 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 7 1042 677 229 26 13 chr13 59958629 59958784 -60325528 - B3 SINE B2 0 216 60 7 1042 448 275 69 75 chr13 59958830 59959003 -60325309 - Lx8 LINE L1 -135 7338 7167 7 1042 2561 260 42 46 chr13 59959069 59959765 -60324547 - Lx8 LINE L1 -284 7189 6491 7 1042 1477 224 58 36 chr13 59959765 59960130 -60324182 + ORR1D1 LTR MaLR 2 374 0 7 1042 2561 260 42 46 chr13 59960130 59960199 -60324113 - Lx8 LINE L1 -983 6490 6427 7 1042 547 176 102 7 chr13 59960189 59960326 -60323986 + Lx8 LINE L1 6289 6438 -1035 7 1042 203 286 9 0 chr13 59960653 59960758 -60323554 + (CA)n Simple_repeat Simple_repeat 1 106 0 7 1042 768 163 35 0 chr13 59961339 59961480 -60322832 - B3A SINE B2 -51 147 2 7 1042 325 141 0 45 chr13 59961485 59961552 -60322760 + T-rich Low_complexity Low_complexity 4 67 0 7 1042 446 204 0 10 chr13 59961552 59961656 -60322656 + CT-rich Low_complexity Low_complexity 2 104 0 7 1042 294 231 0 15 chr13 59961753 59961819 -60322493 + PB1D9 SINE Alu 37 101 -19 7 1042 261 0 0 0 chr13 59961821 59961850 -60322462 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7 1042 1139 115 59 16 chr13 59962316 59962502 -60321810 - B2_Mm2 SINE B2 0 195 2 7 1042 998 88 73 0 chr13 59962656 59962793 -60321519 + B1_Mm SINE Alu 1 147 0 7 1042 320 248 114 0 chr13 59963349 59963454 -60320858 + B1F1 SINE Alu 2 118 -31 7 1042 180 115 31 47 chr13 59963540 59963604 -60320708 + T-rich Low_complexity Low_complexity 2 64 0 7 1042 226 132 19 19 chr13 59963695 59963749 -60320563 + A-rich Low_complexity Low_complexity 4 57 0 7 1042 1077 84 0 0 chr13 59963918 59964147 -60320165 + (CA)n Simple_repeat Simple_repeat 1 229 0 7 1042 470 214 51 44 chr13 59964168 59964305 -60320007 + ID_B1 SINE B4 81 218 -6 7 1042 361 336 17 0 chr13 59964515 59964631 -60319681 + MTEb LTR MaLR 1 118 -261 7 1042 612 240 221 15 chr13 59964634 59964905 -60319407 + MTEb LTR MaLR 49 375 -4 7 1042 337 315 80 48 chr13 59965194 59965485 -60318827 + MLT1A LTR MaLR 1 307 -58 7 1042 868 204 25 5 chr13 59965846 59966038 -60318274 - B3 SINE B2 0 198 2 7 1042 675 190 0 32 chr13 59966555 59966680 -60317632 - B3 SINE B2 0 216 96 7 1042 582 301 17 28 chr13 59966982 59967163 -60317149 + B4A SINE B4 5 183 -109 7 1042 1188 227 148 33 chr13 59967178 59967237 -60317075 + ORR1D2 LTR MaLR 1 59 -311 7 1042 2221 181 8 123 chr13 59967237 59967862 -60316450 + RLTR31_Mur LTR ERVK 1 553 0 7 1042 1188 227 148 33 chr13 59967862 59968134 -60316178 + ORR1D2 LTR MaLR 60 370 0 7 1042 495 313 69 0 chr13 59968134 59968263 -60316049 + RSINE1 SINE B4 22 159 -6 7 1042 233 315 39 52 chr13 59968273 59968350 -60315962 + B4A SINE B4 215 290 -2 7 1042 180 0 0 0 chr13 59968392 59968412 -60315900 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 1042 751 268 5 30 chr13 59969732 59969932 -60314380 - B3A SINE B2 0 198 4 7 1042 745 230 7 0 chr13 59970073 59970212 -60314100 + B1_Mur1 SINE Alu 4 143 -6 7 1042 232 161 16 16 chr13 59970229 59970292 -60314020 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 7 1042 421 232 67 74 chr13 59970333 59970482 -60313830 - B1F SINE Alu -1 148 1 8 1042 842 235 44 15 chr13 59970978 59971181 -60313131 - B3 SINE B2 -6 210 2 8 1042 1394 170 67 55 chr13 59971198 59971558 -60312754 - ORR1C1 LTR MaLR 0 378 1 8 1042 368 209 36 51 chr13 59971558 59971710 -60312602 - ORR1C1 LTR MaLR -244 130 1 8 1042 438 220 207 86 chr13 59971775 59971949 -60312363 + B3A SINE B2 4 198 0 8 1042 1183 54 0 13 chr13 59971953 59972102 -60312210 + B1_Mm SINE Alu 1 147 0 8 1042 787 184 0 26 chr13 59972141 59972292 -60312020 + B1_Mus2 SINE Alu 1 147 0 8 1042 286 23 47 0 chr13 59972292 59972335 -60311977 + (CAAAAA)n Simple_repeat Simple_repeat 4 48 0 8 1042 871 280 151 23 chr13 59972851 59973202 -60311110 + MTD LTR MaLR 21 416 -3 8 1042 183 80 0 0 chr13 59974800 59974825 -60309487 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1042 552 82 10 39 chr13 59978726 59978828 -60305484 + (TCTA)n Simple_repeat Simple_repeat 1 99 0 8 1042 385 116 77 30 chr13 59978872 59979041 -60305271 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 8 1042 595 356 111 29 chr13 59979048 59979571 -60304741 + LTR78 LTR ERV1 62 627 -677 8 1042 665 111 24 24 chr13 59979668 59979835 -60304477 + (CAGA)n Simple_repeat Simple_repeat 2 168 0 8 1042 663 136 18 9 chr13 59980096 59980207 -60304105 + RMER10B LTR ERVL 21 132 -266 8 1042 459 0 0 0 chr13 59980208 59980259 -60304053 + (TC)n Simple_repeat Simple_repeat 2 52 0 8 1042 891 143 87 0 chr13 59980264 59980425 -60303887 + RMER10B LTR ERVL 224 398 0 8 1042 223 307 37 74 chr13 59980432 59980513 -60303799 + PB1D10 SINE Alu 23 100 -17 8 1042 23 0 0 0 chr13 59980514 59980537 -60303775 + GC_rich Low_complexity Low_complexity 1 23 0 8 1042 386 318 58 23 chr13 59980537 59980711 -60303601 + LTR78 LTR ERV1 1040 1219 -85 8 1042 233 20 59 39 chr13 59980926 59980977 -60303335 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 8 1042 273 297 77 0 chr13 59981726 59981817 -60302495 + MER46C DNA MER2_type 241 338 0 8 1042 229 292 70 12 chr13 59982011 59982105 -60302207 - B1F1 SINE Alu -19 98 2 8 1042 261 58 58 0 chr13 59982435 59982487 -60301825 + (TTTTTG)n Simple_repeat Simple_repeat 4 58 0 8 1042 254 214 39 39 chr13 59983580 59983682 -60300630 + G-rich Low_complexity Low_complexity 3 104 0 8 1042 35 0 0 0 chr13 59983783 59983818 -60300494 + AT_rich Low_complexity Low_complexity 1 35 0 8 1042 240 333 43 0 chr13 59984727 59984844 -60299468 + L1ME3A LINE L1 5990 6111 -62 8 1042 1954 152 116 77 chr13 59985376 59985781 -60298531 - MTC LTR MaLR 0 421 1 8 1042 274 301 21 0 chr13 59986474 59986567 -60297745 + BC1_Mm scRNA scRNA 1 95 -57 8 1042 316 231 0 124 chr13 59986636 59986725 -60297587 + PB1 SINE Alu 40 117 0 8 1042 501 286 54 13 chr13 59986758 59986907 -60297405 - RSINE1 SINE B4 -8 157 3 8 1042 2143 156 13 51 chr13 59986908 59987301 -60297011 - ORR1C1 LTR MaLR 0 378 1 8 1042 250 311 96 10 chr13 59987347 59987451 -60296861 - MARNA DNA Mariner -200 386 274 8 1042 1993 154 3 0 chr13 59987596 59987894 -60296418 - RMER19B LTR ERVK -603 299 1 8 1042 515 327 0 0 chr13 59987970 59988083 -60296229 + B4A SINE B4 1 113 -179 8 1042 1007 182 23 6 chr13 59988084 59988261 -60296051 - B3 SINE B2 -21 195 16 8 1042 255 31 0 0 chr13 59989057 59989089 -60295223 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 8 1042 388 345 60 77 chr13 59989188 59989552 -60294760 - MLT1I LTR MaLR -7 404 47 8 1042 474 18 0 0 chr13 59989766 59989821 -60294491 + (TC)n Simple_repeat Simple_repeat 2 56 0 8 1042 246 125 0 0 chr13 59989824 59989872 -60294440 + (TCTG)n Simple_repeat Simple_repeat 3 50 0 8 1042 899 172 0 8 chr13 59990269 59990522 -60293790 + (CA)n Simple_repeat Simple_repeat 1 251 0 8 1042 270 81 0 0 chr13 59991867 59991904 -60292408 + (CA)n Simple_repeat Simple_repeat 1 37 0 8 1042 425 277 50 0 chr13 59992186 59992287 -60292025 - PB1D10 SINE Alu -7 110 5 8 1042 261 206 139 43 chr13 59992489 59992582 -60291730 - MIRm SINE MIR -70 198 101 8 1042 518 258 50 0 chr13 59994771 59994891 -60289421 - B1F SINE Alu -23 126 1 8 1042 958 161 12 0 chr13 59994990 59995313 -60288999 + (TATG)n Simple_repeat Simple_repeat 1 327 0 8 1042 227 321 6 64 chr13 59995608 59995714 -60288598 + L2b LINE L2 3306 3425 -1 8 1042 270 0 0 0 chr13 59995777 59995807 -60288505 + (TG)n Simple_repeat Simple_repeat 1 30 0 8 1042 542 263 8 58 chr13 59995807 59995928 -60288384 - RSINE1 SINE B4 -46 119 5 8 1042 230 359 37 43 chr13 59995933 59996096 -60288216 - MIR SINE MIR -10 252 91 8 1042 858 198 96 5 chr13 59996298 59996486 -60287826 + B3 SINE B2 11 215 -1 8 1042 2038 90 89 54 chr13 59997218 59997534 -60286778 + ORR1A2 LTR MaLR 1 327 0 8 1042 360 325 65 127 chr13 59997619 59998285 -60286027 - L1MC LINE L1 -1378 4768 4135 8 1042 1174 82 0 0 chr13 59998285 59998431 -60285881 - B1_Mus2 SINE Alu -1 146 1 8 1042 360 325 65 127 chr13 59998431 59998465 -60285847 - L1MC LINE L1 -2012 4134 4119 8 1042 674 269 121 0 chr13 59998465 59998647 -60285665 + B3 SINE B2 3 206 -10 8 1042 360 325 65 127 chr13 59998647 59998732 -60285580 - L1MC LINE L1 -2028 4118 4031 8 1042 811 268 171 37 chr13 59998783 59999240 -60285072 - Lx8 LINE L1 -12 7461 6944 8 1042 275 330 168 27 chr13 59999384 59999716 -60284596 - L1MB4 LINE L1 -10 6174 5796 8 1042 495 258 65 85 chr13 59999739 59999985 -60284327 - L1MB4 LINE L1 -373 5805 5565 8 1042 535 158 28 30 chr13 60000290 60000654 -60283658 + (CA)n Simple_repeat Simple_repeat 1 362 0 1 1042 523 244 10 3 chr13 60003104 60003397 -60280915 + (TG)n Simple_repeat Simple_repeat 1 295 0 2 1042 252 0 0 0 chr13 60004368 60004396 -60279916 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1042 245 315 40 86 chr13 60005267 60005465 -60278847 + RLTR40 LTR ERVK 50 238 -579 4 1042 437 0 19 0 chr13 60005533 60005586 -60278726 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1042 807 303 97 11 chr13 60007107 60007487 -60276825 + Lx8 LINE L1 4858 5270 -610 6 1042 535 186 77 8 chr13 60007507 60007637 -60276675 + B1_Mus1 SINE Alu 10 148 0 7 1042 1034 259 126 6 chr13 60007644 60008075 -60276237 + Lx8 LINE L1 5446 5931 -369 6 1042 409 265 52 57 chr13 60008099 60008291 -60276021 + Lx8 LINE L1 6059 6249 -1224 6 1042 3850 142 18 13 chr13 60008307 60008926 -60275386 + RLTR17 LTR ERVK 1 622 -70 8 1042 1294 291 95 37 chr13 60008955 60009049 -60275263 + Lx8 LINE L1 6277 6365 -1108 6 1042 3295 59 129 17 chr13 60009049 60009514 -60274798 + MURVY-LTR LTR ERV1 1 517 -2 9 1042 1294 291 95 37 chr13 60009514 60009883 -60274429 + Lx8 LINE L1 6366 6767 -706 6 1042 310 263 83 55 chr13 60010423 60010568 -60273744 + MIRb SINE MIR 38 186 -82 1 1042 1503 226 114 16 chr13 60010858 60011227 -60273085 + MTD LTR MaLR 1 405 -14 1 1042 243 0 0 0 chr13 60011623 60011650 -60272662 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1042 422 289 40 57 chr13 60012428 60012604 -60271708 - MLT1K LTR MaLR -2 593 421 1 1042 796 182 182 0 chr13 60012610 60012780 -60271532 + URR1B DNA MER1_type 1 201 -24 1 1042 555 112 25 0 chr13 60012782 60012862 -60271450 + BC1_Mm scRNA scRNA 1 82 -70 1 1042 371 226 54 0 chr13 60012862 60012875 -60271437 + ID_B1 SINE B4 1 98 -126 1 1042 3068 53 52 3 chr13 60012935 60013316 -60270996 - MTB LTR MaLR 0 400 1 1 1042 237 211 0 0 chr13 60013773 60013825 -60270487 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1042 446 306 42 32 chr13 60013843 60014059 -60270253 + RMER12 LTR ERVK 771 988 -334 1 1042 494 192 16 0 chr13 60014060 60014185 -60270127 + (TATG)n Simple_repeat Simple_repeat 4 130 0 2 1042 328 331 33 0 chr13 60014210 60014331 -60269981 + Tigger5 DNA MER2_type 2107 2231 -175 2 1042 374 276 10 0 chr13 60014401 60014499 -60269813 + PB1D10 SINE Alu 5 103 -14 2 1042 202 222 0 16 chr13 60014499 60014560 -60269752 + (CAGA)n Simple_repeat Simple_repeat 1 60 0 2 1042 2470 186 21 15 chr13 60014560 60015084 -60269228 - RLTR11A2 LTR ERVK 0 527 1 2 1042 202 222 0 16 chr13 60015084 60015108 -60269204 + (CAGA)n Simple_repeat Simple_repeat 1 24 0 2 1042 219 69 0 0 chr13 60015185 60015214 -60269098 + (TGAG)n Simple_repeat Simple_repeat 4 32 0 2 1042 539 15 15 0 chr13 60015373 60015441 -60268871 + (TG)n Simple_repeat Simple_repeat 1 69 0 2 1042 490 334 61 17 chr13 60015601 60015856 -60268456 + RMER20B LTR ERVK 168 418 -209 2 1042 259 372 0 0 chr13 60016110 60016204 -60268108 + (TG)n Simple_repeat Simple_repeat 1 94 0 2 1042 536 340 85 50 chr13 60016205 60016487 -60267825 - B4A SINE B4 0 292 1 3 1042 248 282 70 0 chr13 60016516 60016587 -60267725 + ID4 SINE ID 5 80 -3 3 1042 240 347 40 57 chr13 60018340 60018517 -60265795 - LTR16A LTR ERVL -221 230 57 3 1042 967 265 149 21 chr13 60018518 60018846 -60265466 + ORR1D2 LTR MaLR 1 370 0 3 1042 554 246 6 0 chr13 60020288 60020455 -60263857 + (TG)n Simple_repeat Simple_repeat 2 169 0 3 1042 29 28 0 0 chr13 60020596 60020632 -60263680 + AT_rich Low_complexity Low_complexity 1 36 0 3 1042 206 194 16 0 chr13 60020652 60020714 -60263598 + (TATG)n Simple_repeat Simple_repeat 4 66 0 3 1042 438 351 148 21 chr13 60020729 60021107 -60263205 - L1MC1 LINE L1 -85 6248 5823 3 1042 293 200 44 11 chr13 60021429 60021520 -60262792 + (TGG)n Simple_repeat Simple_repeat 3 96 0 3 1042 27 0 0 0 chr13 60021771 60021798 -60262514 + AT_rich Low_complexity Low_complexity 1 27 0 3 1042 3978 178 78 29 chr13 60022257 60023075 -60261237 + RMER19B LTR ERVK 55 896 -6 4 1042 321 281 94 72 chr13 60023302 60023440 -60260872 - MLT1A1 LTR MaLR 0 408 268 4 1042 443 18 18 0 chr13 60023825 60023881 -60260431 + (CA)n Simple_repeat Simple_repeat 1 57 0 4 1042 1133 203 19 0 chr13 60025618 60025825 -60258487 + MT2A LTR ERVL 94 304 -229 4 1042 428 275 42 0 chr13 60026240 60026360 -60257952 - Lx8 LINE L1 -1164 6309 6185 4 1042 500 301 51 0 chr13 60026560 60026716 -60257596 + Lx8 LINE L1 6340 6503 -970 4 1042 821 85 0 0 chr13 60026720 60026826 -60257486 - ORR1A3 LTR MaLR 0 326 221 4 1042 1041 8 0 0 chr13 60027927 60028045 -60256267 + (TCTCC)n Simple_repeat Simple_repeat 5 122 0 4 1042 538 185 6 11 chr13 60028238 60028418 -60255894 + (TG)n Simple_repeat Simple_repeat 2 180 0 4 1042 264 210 0 0 chr13 60028418 60028480 -60255832 + (TCTG)n Simple_repeat Simple_repeat 2 63 0 4 1042 648 176 0 0 chr13 60028483 60028653 -60255659 + (TG)n Simple_repeat Simple_repeat 1 170 0 5 1042 411 113 0 0 chr13 60029827 60029889 -60254423 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 1042 261 323 40 0 chr13 60030596 60030695 -60253617 - L3 LINE CR1 -1610 2879 2777 5 130 627 285 167 53 chr13 60030868 60031150 -60253162 + MLT1D LTR MaLR 191 504 -1 5 1043 369 75 0 0 chr13 60031418 60031471 -60252841 + (TCTG)n Simple_repeat Simple_repeat 4 56 0 5 1043 250 282 120 73 chr13 60031531 60031722 -60252590 - B4 SINE B4 -18 274 75 5 1043 390 91 0 0 chr13 60031748 60031803 -60252509 + (TATG)n Simple_repeat Simple_repeat 4 58 0 5 1043 665 280 0 31 chr13 60031812 60031974 -60252338 - RSINE1 SINE B4 -4 161 5 5 1043 518 208 109 51 chr13 60032255 60032392 -60251920 + RLTR20C LTR ERVK 56 200 -334 5 1043 330 26 0 0 chr13 60032656 60032695 -60251617 + (TATG)n Simple_repeat Simple_repeat 4 42 0 5 1043 665 280 0 31 chr13 60032704 60032866 -60251446 - RSINE1 SINE B4 -4 161 5 6 1043 518 208 109 51 chr13 60033147 60033284 -60251028 + RLTR20C LTR ERVK 56 200 -334 6 1043 959 98 15 0 chr13 60033591 60033724 -60250588 + B1_Mur3 SINE Alu 6 140 -9 6 1043 294 29 0 0 chr13 60033724 60033759 -60250553 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1043 775 257 112 0 chr13 60033759 60033973 -60250339 - ORR1D1 LTR MaLR -63 311 74 6 1043 312 143 0 0 chr13 60033976 60034032 -60250280 + (CAA)n Simple_repeat Simple_repeat 2 57 0 6 1043 267 239 28 14 chr13 60034179 60034251 -60250061 + MTE2a LTR MaLR 106 178 -201 6 1043 309 68 0 0 chr13 60034298 60034342 -60249970 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1043 726 152 0 0 chr13 60034451 60034576 -60249736 + CT-rich Low_complexity Low_complexity 4 128 0 6 1043 350 48 0 0 chr13 60034576 60034618 -60249694 + (TCC)n Simple_repeat Simple_repeat 3 44 0 6 1043 206 304 25 0 chr13 60034697 60034776 -60249536 + C-rich Low_complexity Low_complexity 3 83 0 7 1043 1639 123 27 31 chr13 60035181 60035514 -60248798 - RLTR11B LTR ERVK 0 453 1 7 1043 257 204 57 0 chr13 60036315 60036403 -60247909 + (TA)n Simple_repeat Simple_repeat 1 93 0 7 1043 1069 289 7 51 chr13 60036403 60036695 -60247617 + B4 SINE B4 13 291 -1 7 1043 1306 155 170 28 chr13 60036863 60037222 -60247090 - RMER17C LTR ERVK 0 410 1 7 1043 218 253 179 12 chr13 60037409 60037493 -60246819 - MIR3 SINE MIR -24 184 87 7 1043 325 317 131 6 chr13 60038337 60038505 -60245807 + MIR SINE MIR 13 201 -61 7 1043 858 217 42 21 chr13 60038612 60038805 -60245507 - B3 SINE B2 0 216 20 7 1043 212 306 60 18 chr13 60039022 60039134 -60245178 - MIRm SINE MIR -48 220 98 7 1043 310 341 189 11 chr13 60040673 60040848 -60243464 - MLT1A LTR MaLR -15 554 349 7 1043 364 118 0 34 chr13 60040943 60041031 -60243281 + (CAGAGA)n Simple_repeat Simple_repeat 2 86 0 8 1043 420 173 19 39 chr13 60041098 60041254 -60243058 + GA-rich Low_complexity Low_complexity 4 156 0 8 1043 328 294 84 49 chr13 60041263 60041406 -60242906 - MLT1A LTR MaLR -226 148 1 7 1043 316 281 153 73 chr13 60041463 60041790 -60242522 + ORR1E LTR MaLR 3 355 -4 8 1043 1019 271 116 6 chr13 60043177 60043497 -60240815 - ORR1E LTR MaLR 0 359 5 8 1043 327 317 0 0 chr13 60043714 60043796 -60240516 + polypurine Low_complexity Low_complexity 2 83 0 8 1043 837 141 11 6 chr13 60043797 60043976 -60240336 + GA-rich Low_complexity Low_complexity 1 180 0 8 1043 250 363 75 13 chr13 60044148 60044307 -60240005 - MIR SINE MIR -10 252 84 8 1043 226 0 59 0 chr13 60045499 60045533 -60238779 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 8 1043 213 281 0 0 chr13 60046461 60046518 -60237794 + (TATG)n Simple_repeat Simple_repeat 3 59 0 8 1043 1036 161 32 11 chr13 60046641 60046829 -60237483 - B2_Mm2 SINE B2 -3 192 1 8 1043 315 0 0 0 chr13 60046889 60046924 -60237388 + (TTA)n Simple_repeat Simple_repeat 2 36 0 9 1043 862 232 53 0 chr13 60046928 60047118 -60237194 - B3 SINE B2 -16 200 1 9 1043 28 0 0 0 chr13 60048232 60048260 -60236052 + AT_rich Low_complexity Low_complexity 1 28 0 9 1043 645 224 0 0 chr13 60048459 60048689 -60235623 + (TG)n Simple_repeat Simple_repeat 1 230 0 9 1043 762 288 82 45 chr13 60048695 60048939 -60235373 - B4 SINE B4 0 292 40 9 1043 296 279 188 29 chr13 60048985 60049192 -60235120 - MLT2F LTR ERVL -345 318 79 9 1043 24 67 0 0 chr13 60049781 60049826 -60234486 + AT_rich Low_complexity Low_complexity 1 45 0 9 1043 518 293 37 70 chr13 60049959 60050146 -60234166 - Lx8 LINE L1 -154 7319 7139 9 1043 194 307 19 65 chr13 60050817 60050925 -60233387 + L2b LINE L2 2983 3085 -290 9 1043 573 189 150 0 chr13 60051961 60052088 -60232224 - B1F SINE Alu -3 146 1 9 1043 241 247 144 0 chr13 60052485 60052588 -60231724 - MIR SINE MIR -113 155 28 1 1043 407 182 16 120 chr13 60052898 60053023 -60231289 + MER44B DNA MER2_type 281 392 -158 1 1043 336 24 0 0 chr13 60053024 60053065 -60231247 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1043 785 243 13 0 chr13 60053065 60053217 -60231095 - B3A SINE B2 -44 154 1 1 1043 244 286 64 45 chr13 60053219 60053329 -60230983 + MER44B DNA MER2_type 364 475 -75 1 1043 180 235 110 66 chr13 60054106 60054197 -60230115 - L3 LINE CR1 -4309 180 86 1 1043 196 321 136 108 chr13 60054158 60054409 -60229903 - L2b LINE L2 0 3375 3118 1 1043 776 149 58 22 chr13 60054645 60054894 -60229418 + RMER17C LTR ERVK 3 325 -85 1 1043 536 275 152 40 chr13 60055031 60055261 -60229051 - MLT1B LTR MaLR 0 390 133 1 1043 375 222 52 54 chr13 60055261 60055373 -60228939 + MTD LTR MaLR 1 110 -286 1 1043 221 289 55 11 chr13 60055408 60055499 -60228813 - MIR SINE MIR -157 105 11 1 1043 455 269 79 24 chr13 60055720 60055884 -60228428 + MTD LTR MaLR 1 173 -246 1 1043 568 241 75 119 chr13 60055901 60056061 -60228251 + B3 SINE B2 34 186 -9 1 1043 1205 91 33 6 chr13 60056129 60056647 -60227665 + (TCTA)n Simple_repeat Simple_repeat 1 531 0 1 1043 505 52 26 0 chr13 60056658 60056735 -60227577 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 1 1043 1340 65 21 5 chr13 60059018 60059204 -60225108 - B2_Mm2 SINE B2 0 195 7 1 1043 957 214 266 63 chr13 60059339 60059719 -60224593 + MT2A LTR ERVL 1 465 -68 1 1043 504 0 0 0 chr13 60059719 60059775 -60224537 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 1 1043 957 214 266 63 chr13 60059775 60059804 -60224508 + MT2A LTR ERVL 466 493 -40 1 1043 466 165 8 16 chr13 60059805 60059928 -60224384 + (TATG)n Simple_repeat Simple_repeat 2 123 0 1 1043 361 266 116 5 chr13 60059931 60059987 -60224325 + RLTR21 LTR ERVK 1097 1158 -414 1 1043 968 124 6 0 chr13 60059987 60060165 -60224147 + (TATG)n Simple_repeat Simple_repeat 2 180 0 1 1043 361 266 116 5 chr13 60060165 60060297 -60224015 + RLTR21 LTR ERVK 1159 1305 -267 1 1043 277 132 0 68 chr13 60060317 60060355 -60223957 + MT2A LTR ERVL 466 499 -34 1 1043 348 64 0 0 chr13 60060355 60060402 -60223910 + (TCCA)n Simple_repeat Simple_repeat 3 49 0 1 1043 277 132 0 68 chr13 60060402 60060436 -60223876 + MT2A LTR ERVL 500 533 0 1 1043 195 300 33 0 chr13 60060730 60060790 -60223522 + L2c LINE L2 3266 3327 -60 1 1043 2529 131 60 10 chr13 60061257 60061658 -60222654 + MTC LTR MaLR 1 421 0 1 1043 310 189 13 63 chr13 60062685 60062764 -60221548 - HAL1-3A_ME LINE L1 -811 2047 1973 1 1043 482 143 7 43 chr13 60062793 60062932 -60221380 + (TG)n Simple_repeat Simple_repeat 1 134 0 1 1043 313 280 0 36 chr13 60063065 60063165 -60221147 - MLT1B LTR MaLR -20 388 265 1 1043 2074 33 0 0 chr13 60063699 60063942 -60220370 + L1Md_A LINE L1 6340 6582 0 1 1043 414 69 0 0 chr13 60065388 60065446 -60218866 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1043 346 291 29 19 chr13 60065514 60065619 -60218693 - MLT1B LTR MaLR -282 108 3 1 1043 522 311 16 16 chr13 60066093 60066217 -60218095 + RSINE1 SINE B4 3 126 -39 1 1043 23 33 0 0 chr13 60066267 60066297 -60218015 + AT_rich Low_complexity Low_complexity 1 30 0 1 1043 259 196 0 97 chr13 60066926 60066960 -60217352 - ORR1B2 LTR MaLR -252 115 86 1 1043 3063 60 42 3 chr13 60066960 60067345 -60216967 - MTB LTR MaLR 0 400 1 1 1043 259 196 0 97 chr13 60067345 60067372 -60216940 - ORR1B2 LTR MaLR -282 85 60 1 1043 2398 125 88 22 chr13 60067357 60067765 -60216547 + MT2B LTR ERVL 167 601 0 1 1043 261 288 0 0 chr13 60067938 60067997 -60216315 + MLT1A1 LTR MaLR 350 408 0 1 1043 478 264 19 0 chr13 60068586 60068692 -60215620 + polypyrimidine Low_complexity Low_complexity 2 109 0 1 1043 773 167 6 30 chr13 60068692 60069049 -60215263 + CT-rich Low_complexity Low_complexity 1 348 0 1 1043 303 313 92 46 chr13 60069329 60069503 -60214809 + MER44A DNA MER2_type 15 196 -143 1 1043 318 282 78 0 chr13 60069507 60069610 -60214702 - B1F2 SINE Alu -37 112 2 1 1043 450 206 103 0 chr13 60069611 60069718 -60214594 + MER44A DNA MER2_type 174 292 -47 1 1043 2155 203 131 62 chr13 60069798 60070354 -60213958 + RMER19B LTR ERVK 1 602 -300 1 1043 2017 135 16 0 chr13 60070354 60070658 -60213654 + RLTR27 LTR ERVK 1 309 0 1 1043 2155 239 82 99 chr13 60070658 60070895 -60213417 + RMER19B LTR ERVK 384 668 -234 1 1043 233 312 63 5 chr13 60071539 60071669 -60212643 - MIRb SINE MIR -95 173 31 1 1043 643 293 306 28 chr13 60074740 60075419 -60208893 - L1MD LINE L1 -870 5276 4401 1 1043 216 67 0 0 chr13 60075419 60075449 -60208863 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1043 324 303 224 43 chr13 60075449 60075570 -60208742 - L1MD LINE L1 -1746 4400 4266 1 1043 328 185 56 148 chr13 60075625 60075733 -60208579 - B4A SINE B4 0 292 195 1 1043 264 186 0 0 chr13 60078407 60078466 -60205846 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1043 411 255 88 0 chr13 60079046 60079148 -60205164 - B1F SINE Alu -38 111 1 1 1043 2036 247 67 69 chr13 60079834 60080429 -60203883 + RMER19C LTR ERVK 6 599 -12 1 1043 54 16 0 0 chr13 60080443 60080504 -60203808 + AT_rich Low_complexity Low_complexity 1 61 0 1 1043 264 367 59 20 chr13 60080937 60081090 -60203222 - Arthur1 DNA Tip100 -3624 323 165 1 1043 1118 284 119 24 chr13 60081287 60081748 -60202564 - Lx9 LINE L1 -1 7643 7139 1 1043 26 0 0 0 chr13 60082038 60082064 -60202248 + AT_rich Low_complexity Low_complexity 1 26 0 1 1043 189 315 137 0 chr13 60082679 60082752 -60201560 - L2b LINE L2 0 3375 3293 1 1043 273 270 42 15 chr13 60084458 60084574 -60199738 - MIRc SINE MIR -109 167 41 1 1043 740 11 0 11 chr13 60084713 60084803 -60199509 + (TCTA)n Simple_repeat Simple_repeat 1 89 0 1 1043 710 258 105 88 chr13 60084849 60084969 -60199343 + B4A SINE B4 2 134 -158 1 1043 378 0 0 0 chr13 60084969 60085011 -60199301 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1043 710 258 105 88 chr13 60085011 60085175 -60199137 + B4A SINE B4 135 291 -1 1 1043 892 209 61 0 chr13 60085194 60085390 -60198922 - B3 SINE B2 -8 208 1 1 1043 597 277 168 55 chr13 60086337 60086418 -60197894 + MTD LTR MaLR 22 104 -296 1 1043 432 37 0 0 chr13 60086418 60086472 -60197840 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1043 709 210 155 30 chr13 60086472 60086728 -60197584 + MTD LTR MaLR 105 418 -1 1 1043 284 115 0 19 chr13 60086737 60086759 -60197553 + (TTC)n Simple_repeat Simple_repeat 1 22 0 1 1043 1079 122 0 11 chr13 60086759 60086941 -60197371 + (TCC)n Simple_repeat Simple_repeat 1 180 0 1 1043 284 115 0 19 chr13 60086941 60086971 -60197341 + (TTC)n Simple_repeat Simple_repeat 2 30 0 1 1043 384 325 30 54 chr13 60087011 60087177 -60197135 - RSINE1 SINE B4 0 165 4 1 1043 1135 83 7 0 chr13 60087418 60087563 -60196749 + B1_Mus2 SINE Alu 1 146 -1 1 1043 224 30 0 29 chr13 60087564 60087598 -60196714 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1 1043 404 304 7 0 chr13 60087668 60087803 -60196509 + (TG)n Simple_repeat Simple_repeat 1 136 0 1 1043 402 139 0 0 chr13 60087816 60087888 -60196424 + (TG)n Simple_repeat Simple_repeat 1 72 0 1 1043 1001 111 89 44 chr13 60088267 60088447 -60195865 - B2_Mm2 SINE B2 -7 188 1 1 1043 239 257 83 28 chr13 60089443 60089515 -60194797 + MTEa LTR MaLR 290 365 -14 1 1043 198 308 154 0 chr13 60090703 60090807 -60193505 + MIRb SINE MIR 13 132 -136 1 1043 393 221 0 0 chr13 60091756 60091824 -60192488 + B3A SINE B2 8 75 -123 1 1043 474 333 55 27 chr13 60091934 60092153 -60192159 - MIRb SINE MIR -43 225 1 1 1043 226 238 24 36 chr13 60092665 60092748 -60191564 + G-rich Low_complexity Low_complexity 4 85 0 1 1043 1212 98 11 11 chr13 60093468 60093643 -60190669 - B2_Mm1t SINE B2 -18 175 1 1 1043 380 165 9 46 chr13 60093736 60093844 -60190468 + CT-rich Low_complexity Low_complexity 2 105 0 1 1043 380 363 71 65 chr13 60094916 60095255 -60189057 - ORR1E LTR MaLR 0 359 19 1 1043 368 324 54 0 chr13 60095558 60095669 -60188643 - PB1D10 SINE Alu 0 117 1 1 1043 248 311 0 16 chr13 60095614 60095676 -60188636 - B4 SINE B4 -152 140 80 1 1043 231 325 26 13 chr13 60096405 60096483 -60187829 - RSINE1 SINE B4 -4 161 83 1 1043 596 223 50 14 chr13 60096695 60096837 -60187475 - B1F SINE Alu -111 200 12 1 1043 922 161 0 36 chr13 60096991 60097159 -60187153 + URR1A DNA MER1_type 59 220 -6 1 1043 22 0 0 0 chr13 60097742 60097764 -60186548 + AT_rich Low_complexity Low_complexity 1 22 0 1 1043 396 0 0 0 chr13 60098888 60098932 -60185380 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1043 837 263 19 14 chr13 60099476 60099688 -60184624 - B3 SINE B2 -3 213 1 1 1043 1272 60 65 0 chr13 60099886 60100054 -60184258 + B2_Mm2 SINE B2 3 181 -14 1 1043 354 65 358 9 chr13 60100106 60100212 -60184100 + B2_Mm2 SINE B2 50 192 -3 1 1043 25 0 0 0 chr13 60100344 60100369 -60183943 + AT_rich Low_complexity Low_complexity 1 25 0 1 1043 1163 171 71 0 chr13 60100381 60100591 -60183721 - URR1B DNA MER1_type 0 225 1 1 1043 340 325 32 24 chr13 60100773 60100896 -60183416 - B4A SINE B4 -153 139 16 1 1043 314 320 29 0 chr13 60101382 60101485 -60182827 - MLT1H LTR MaLR -374 175 70 1 1043 196 374 89 8 chr13 60101535 60101659 -60182653 - MIRb SINE MIR -51 217 84 1 1043 567 283 90 35 chr13 60102345 60102634 -60181678 - L1MC LINE L1 -2261 5621 5317 1 1043 312 27 0 0 chr13 60102790 60102827 -60181485 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1043 424 326 86 23 chr13 60102989 60103209 -60181103 + MER102a DNA MER1_type 97 330 0 1 1043 278 253 50 12 chr13 60103669 60103749 -60180563 - Tigger5 DNA MER2_type -152 2254 2172 1 1043 201 74 0 0 chr13 60104182 60104209 -60180103 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1043 267 31 0 0 chr13 60104620 60104652 -60179660 + (TCC)n Simple_repeat Simple_repeat 3 34 0 1 1043 313 293 80 51 chr13 60105166 60105342 -60178970 + MLT1D LTR MaLR 284 464 -41 1 1043 754 252 0 0 chr13 60105383 60105522 -60178790 + RSINE1 SINE B4 8 146 -19 1 1043 303 28 0 0 chr13 60105956 60105992 -60178320 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1043 981 305 36 7 chr13 60106003 60106284 -60178028 - B4 SINE B4 -2 290 2 1 1043 367 309 83 36 chr13 60107103 60107355 -60176957 - L1MC4a LINE L1 -656 7226 6963 1 1043 354 167 27 27 chr13 60107514 60107662 -60176650 + (TCTA)n Simple_repeat Simple_repeat 4 151 0 1 1043 350 330 128 54 chr13 60107662 60107829 -60176483 - L1MC4a LINE L1 -4075 2167 2002 2 1043 1157 74 0 7 chr13 60107829 60107978 -60176334 - B1_Mus1 SINE Alu 0 148 1 2 1043 410 308 99 57 chr13 60107978 60108415 -60175897 - L1MC4a LINE L1 -1202 6680 6462 2 1043 384 338 113 0 chr13 60108416 60108629 -60175683 - BLACKJACK DNA AcHobo -2224 720 484 2 1043 237 146 0 0 chr13 60109630 60109678 -60174634 + (CTG)n Simple_repeat Simple_repeat 1 48 0 2 1043 362 255 99 46 chr13 60109678 60109830 -60174482 - RSINE1 SINE B4 -5 160 1 2 1043 291 54 0 0 chr13 60109845 60109882 -60174430 + (TAA)n Simple_repeat Simple_repeat 2 38 0 2 1043 378 0 0 0 chr13 60110189 60110231 -60174081 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1043 186 347 40 13 chr13 60110416 60110492 -60173820 - MIR3 SINE MIR -33 175 98 2 1043 411 228 13 0 chr13 60112284 60112363 -60171949 + ID4_ SINE ID 4 83 0 2 1043 467 236 216 58 chr13 60112570 60112741 -60171571 - B3A SINE B2 0 198 1 2 1043 276 309 21 21 chr13 60112791 60112887 -60171425 - BC1_Mm scRNA scRNA -55 97 2 2 1043 355 329 93 42 chr13 60112979 60113268 -60171044 - L1MA6 LINE L1 -101 6199 5896 2 1043 259 344 136 12 chr13 60113427 60113589 -60170723 + MIR3 SINE MIR 17 198 -10 2 1043 195 204 0 0 chr13 60113818 60113862 -60170450 + GA-rich Low_complexity Low_complexity 1 44 0 2 1043 648 302 102 0 chr13 60115004 60115219 -60169093 + MER2 DNA MER2_type 2 238 -107 2 1043 188 275 53 80 chr13 60116519 60116594 -60167718 + MIRm SINE MIR 91 163 -113 2 1043 770 279 67 22 chr13 60118249 60118561 -60165751 - MLT1F1 LTR MaLR -10 559 198 2 1043 192 97 0 0 chr13 60118585 60118616 -60165696 + (TGGG)n Simple_repeat Simple_repeat 3 33 0 2 1043 239 160 80 0 chr13 60118713 60118763 -60165549 - ORR1D1 LTR MaLR -8 366 313 2 1043 4830 43 17 5 chr13 60118788 60119365 -60164947 - MT2B2 LTR ERVL 0 584 1 2 1043 683 323 60 0 chr13 60119672 60119873 -60164439 + B4A SINE B4 16 228 -64 2 1043 207 0 0 0 chr13 60119994 60120017 -60164295 + (TTG)n Simple_repeat Simple_repeat 3 25 0 2 1043 186 176 0 50 chr13 60121813 60121933 -60162379 + G-rich Low_complexity Low_complexity 4 117 0 2 1043 180 0 0 0 chr13 60122761 60122781 -60161531 + (CTA)n Simple_repeat Simple_repeat 1 20 0 2 1043 186 189 0 0 chr13 60122884 60122921 -60161391 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1043 3089 15 0 0 chr13 60122984 60123321 -60160991 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1043 53778 24 17 6 chr13 60123321 60129725 -60154587 - IAPEz-int LTR ERVK 0 6481 8 2 1043 3103 12 0 0 chr13 60129725 60130062 -60154250 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1043 216 0 0 0 chr13 60130275 60130299 -60154013 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 1043 406 266 8 9 chr13 60130300 60130769 -60153543 + (CA)n Simple_repeat Simple_repeat 1 468 0 2 1043 602 258 8 0 chr13 60131640 60131764 -60152548 - RSINE1 SINE B4 -39 126 2 2 1043 692 310 17 30 chr13 60131764 60131995 -60152317 - B4A SINE B4 -63 229 2 2 1043 1178 7 0 14 chr13 60132135 60132273 -60152039 + B1_Mm SINE Alu 2 137 -10 2 1043 231 22 20 80 chr13 60132274 60132324 -60151988 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1043 1062 255 84 91 chr13 60134760 60135139 -60149173 + MTD LTR MaLR 1 408 -11 2 1043 1192 49 0 14 chr13 60135341 60135485 -60148827 + B1_Mus2 SINE Alu 1 142 -5 2 1043 1069 95 139 17 chr13 60136455 60136627 -60147685 - B2_Mm2 SINE B2 -2 193 1 2 1043 306 247 26 52 chr13 60138233 60138310 -60146002 + MLT1J2 LTR MaLR 65 139 -305 2 1043 677 284 9 130 chr13 60138544 60138868 -60145444 - Lx8 LINE L1 -340 7133 6849 2 1043 1155 201 10 0 chr13 60139042 60139241 -60145071 + B3 SINE B2 1 201 -15 2 1043 2241 93 9 75 chr13 60139586 60139935 -60144377 + ORR1A3 LTR MaLR 1 326 0 2 1043 251 250 0 19 chr13 60140516 60140569 -60143743 - MTEb LTR MaLR -34 345 294 2 1043 1261 175 114 46 chr13 60140869 60141327 -60142985 + ORR1C1 LTR MaLR 5 382 -12 2 1043 600 259 189 95 chr13 60141432 60141696 -60142616 + B4A SINE B4 4 292 0 2 1043 694 48 19 0 chr13 60141709 60141812 -60142500 + (TAGA)n Simple_repeat Simple_repeat 4 108 0 2 1043 458 346 98 14 chr13 60141901 60142115 -60142197 + MER115 DNA Tip100 213 444 -249 2 1043 606 228 119 76 chr13 60142487 60142672 -60141640 - B3A SINE B2 0 198 6 2 1043 1063 243 24 28 chr13 60143404 60143654 -60140658 + B4 SINE B4 24 272 -20 2 1043 531 0 0 0 chr13 60143657 60143716 -60140596 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1043 252 0 0 0 chr13 60143716 60143743 -60140569 + (GA)n Simple_repeat Simple_repeat 2 29 0 2 1043 1217 76 10 52 chr13 60145299 60145493 -60138819 + B2_Mm1t SINE B2 1 186 -7 2 1043 494 299 155 7 chr13 60147640 60147788 -60136524 + ID_B1 SINE B4 1 170 -54 2 1043 375 211 0 0 chr13 60147940 60148035 -60136277 + (TG)n Simple_repeat Simple_repeat 1 95 0 2 1043 333 68 0 0 chr13 60148035 60148079 -60136233 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1043 381 222 107 139 chr13 60148993 60149253 -60135059 + MLT1C LTR MaLR 73 323 -67 2 1043 390 328 0 6 chr13 60150460 60150698 -60133614 + (TG)n Simple_repeat Simple_repeat 1 236 0 2 1043 651 149 0 0 chr13 60150818 60150939 -60133373 + (TG)n Simple_repeat Simple_repeat 1 121 0 2 1043 186 206 114 29 chr13 60151552 60151622 -60132690 - MIR SINE MIR -65 143 68 2 1043 579 300 155 4 chr13 60151867 60152118 -60132194 - B4A SINE B4 -1 291 3 2 1043 300 296 63 56 chr13 60152817 60152960 -60131352 + MIR SINE MIR 30 173 -89 2 1043 425 309 0 0 chr13 60152990 60153100 -60131212 - PB1D10 SINE Alu -5 112 3 2 1043 234 250 0 16 chr13 60153123 60153184 -60131128 - MIRm SINE MIR -110 166 107 2 1043 236 192 0 0 chr13 60153205 60153257 -60131055 + Lx8 LINE L1 7420 7471 -2 2 1043 593 331 6 0 chr13 60153694 60153854 -60130458 - RSINE1 SINE B4 0 165 5 2 1043 308 218 11 0 chr13 60154517 60154604 -60129708 + GA-rich Low_complexity Low_complexity 2 89 0 2 1043 184 290 15 61 chr13 60154657 60154723 -60129589 + MIRc SINE MIR 88 150 -118 2 1043 311 220 177 28 chr13 60155098 60155239 -60129073 - MIRb SINE MIR -103 165 11 2 1043 690 250 17 6 chr13 60155849 60156022 -60128290 - MER121 Unknown Unknown -157 255 81 2 1043 625 95 38 0 chr13 60156247 60156352 -60127960 + (GGGAGA)n Simple_repeat Simple_repeat 4 112 0 2 1043 326 287 56 43 chr13 60156524 60156798 -60127514 - L1ME1 LINE L1 -310 6023 5744 2 1043 276 340 10 0 chr13 60156798 60156898 -60127414 - BC1_Mm scRNA scRNA -36 116 16 2 1043 300 316 98 34 chr13 60156911 60157297 -60127015 - L1ME1 LINE L1 -450 5729 5319 2 1043 378 337 31 6 chr13 60157309 60157493 -60126819 - L1ME1 LINE L1 -2007 4139 3952 2 1043 405 0 0 0 chr13 60157584 60157629 -60126683 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1043 268 203 40 97 chr13 60157757 60157932 -60126380 + (AGGTG)n Simple_repeat Simple_repeat 2 166 0 2 1043 190 193 17 17 chr13 60158644 60158702 -60125610 + GA-rich Low_complexity Low_complexity 3 60 0 2 1043 277 253 21 21 chr13 60158712 60158809 -60125503 + C-rich Low_complexity Low_complexity 2 98 0 2 1043 210 260 20 0 chr13 60158833 60158883 -60125429 + GA-rich Low_complexity Low_complexity 2 52 0 2 1043 215 316 12 12 chr13 60158900 60158980 -60125332 + ID4_ SINE ID 2 81 -2 2 1043 297 229 40 22 chr13 60160033 60160263 -60124049 + G-rich Low_complexity Low_complexity 1 234 0 2 1043 537 186 41 0 chr13 60160282 60160454 -60123858 + G-rich Low_complexity Low_complexity 1 179 0 2 1043 207 0 0 0 chr13 60160583 60160606 -60123706 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1043 30 45 0 0 chr13 60160671 60160715 -60123597 + AT_rich Low_complexity Low_complexity 1 44 0 2 1044 219 246 0 0 chr13 60163804 60163861 -60120451 + (TCTG)n Simple_repeat Simple_repeat 3 59 0 2 1044 215 204 19 0 chr13 60163912 60163966 -60120346 + (TCCA)n Simple_repeat Simple_repeat 4 58 0 2 1044 489 47 0 0 chr13 60164149 60164213 -60120099 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 1044 432 0 0 0 chr13 60164213 60164261 -60120051 + (CAAAC)n Simple_repeat Simple_repeat 1 48 0 2 1044 207 0 0 0 chr13 60164264 60164287 -60120025 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1044 346 293 34 8 chr13 60165653 60165770 -60118542 + MIRm SINE MIR 36 155 -121 2 1044 736 311 84 21 chr13 60167178 60167510 -60116802 + MLT1A1 LTR MaLR 56 408 0 2 1044 310 246 220 0 chr13 60168203 60168321 -60115991 - HAL1-3A_ME LINE L1 -420 2438 2295 2 1044 262 261 29 14 chr13 60168359 60168429 -60115883 + B4A SINE B4 107 177 -115 2 1044 228 122 0 0 chr13 60168544 60168585 -60115727 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 2 1044 280 216 102 56 chr13 60168917 60169025 -60115287 - L1MA8 LINE L1 -263 6028 5916 2 1044 444 19 0 0 chr13 60169105 60169158 -60115154 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1044 351 0 0 0 chr13 60170145 60170184 -60114128 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1044 306 0 0 0 chr13 60170184 60170217 -60114095 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 1044 1005 191 68 50 chr13 60171207 60171427 -60112885 - ID_B1 SINE B4 0 224 1 2 1044 285 296 25 0 chr13 60171721 60171802 -60112510 + (TATG)n Simple_repeat Simple_repeat 3 85 0 2 1044 477 50 0 0 chr13 60171936 60171996 -60112316 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1044 213 281 0 59 chr13 60172035 60172103 -60112209 - B3 SINE B2 -151 65 2 2 1044 389 236 0 114 chr13 60172110 60172215 -60112097 - PB1D10 SINE Alu -6 111 19 2 1044 217 339 0 0 chr13 60172247 60172306 -60112006 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1044 443 328 49 124 chr13 60172309 60172574 -60111738 - B4 SINE B4 -4 288 44 2 1044 600 14 0 0 chr13 60172793 60172862 -60111450 + (CAAG)n Simple_repeat Simple_repeat 2 70 0 2 1044 1017 274 21 124 chr13 60173826 60174246 -60110066 - MTE2a LTR MaLR 0 379 3 3 1044 448 297 100 76 chr13 60174546 60174837 -60109475 + MER2 DNA MER2_type 41 338 -7 3 1044 367 307 40 0 chr13 60175515 60175616 -60108696 - ID_B1 SINE B4 -1 223 119 3 1044 201 231 10 81 chr13 60176721 60176820 -60107492 + (CAGA)n Simple_repeat Simple_repeat 3 94 0 3 1044 216 0 0 0 chr13 60176910 60176934 -60107378 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1044 474 170 0 0 chr13 60176985 60177079 -60107233 + (CA)n Simple_repeat Simple_repeat 1 94 0 3 1044 866 180 58 11 chr13 60177285 60177459 -60106853 + B3 SINE B2 35 216 0 3 1044 955 117 0 12 chr13 60178197 60178361 -60105951 + (TCCC)n Simple_repeat Simple_repeat 3 164 0 3 1044 414 0 0 0 chr13 60179071 60179117 -60105195 + (TAAAA)n Simple_repeat Simple_repeat 4 49 0 3 1044 1109 73 0 0 chr13 60179225 60179362 -60104950 + B1_Mus1 SINE Alu 3 139 -9 3 1044 390 21 0 0 chr13 60179362 60179409 -60104903 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 3 1044 207 0 0 0 chr13 60179479 60179502 -60104810 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1044 1323 56 0 0 chr13 60180642 60180803 -60103509 + B2_Mm2 SINE B2 2 162 -33 3 1044 288 0 0 0 chr13 60180804 60180836 -60103476 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 3 1044 436 200 76 68 chr13 60181153 60181271 -60103041 - PB1D9 SINE Alu -1 119 1 3 1044 998 208 23 14 chr13 60181856 60182075 -60102237 - ID_B1 SINE B4 0 224 4 3 1044 8014 56 1 4 chr13 60183095 60184077 -60100235 - L1Md_F2 LINE L1 -12 6570 5592 3 1044 4774 52 0 3 chr13 60184041 60184622 -60099690 + L1Md_F2 LINE L1 5035 5613 -270 3 1044 276 379 81 0 chr13 60185076 60185250 -60099062 - MLT1K LTR MaLR -215 380 193 3 1044 236 53 26 0 chr13 60185411 60185449 -60098863 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1044 299 327 107 33 chr13 60185484 60185699 -60098613 - ORR1E LTR MaLR -15 344 114 3 1044 397 301 136 67 chr13 60188720 60189161 -60095151 - Tigger5 DNA MER2_type -2157 249 5 3 1044 1899 98 56 117 chr13 60189494 60189854 -60094458 + ORR1A1 LTR MaLR 1 338 -8 3 1044 460 262 365 22 chr13 60189968 60190251 -60094061 + MTE2a LTR MaLR 1 379 0 3 1044 317 245 70 44 chr13 60191135 60191293 -60093019 + HAL1-2a_MD LINE L1 2345 2506 -518 3 1044 375 225 49 84 chr13 60191326 60191763 -60092549 + HAL1-2a_MD LINE L1 2335 2517 -507 3 1044 330 237 52 94 chr13 60191773 60191964 -60092348 + HAL1-2a_MD LINE L1 2335 2517 -507 3 1044 271 368 122 33 chr13 60192334 60192514 -60091798 + Tigger5 DNA MER2_type 2 197 -2209 3 1044 198 372 64 8 chr13 60192718 60192843 -60091469 - MIRc SINE MIR -91 177 50 3 1044 1192 48 0 14 chr13 60192855 60193003 -60091309 - B1_Mus1 SINE Alu -1 147 2 3 1044 2342 116 0 12 chr13 60193149 60193482 -60090830 + ORR1A4 LTR MaLR 1 329 0 3 1044 4664 146 69 54 chr13 60193482 60194853 -60089459 + ORR1A4-int LTR MaLR 1 1545 -35 3 1044 1806 128 41 17 chr13 60194861 60195156 -60089156 + ORR1A4 LTR MaLR 28 329 0 3 1044 586 257 203 16 chr13 60195433 60195738 -60088574 + RMER15 LTR ERVL 214 575 0 3 1044 348 351 20 0 chr13 60195757 60195908 -60088404 - L1M4 LINE L1 -421 5758 5605 3 1044 537 286 8 0 chr13 60196082 60196201 -60088111 - RSINE1 SINE B4 -43 122 3 3 1044 348 322 141 48 chr13 60196206 60196519 -60087793 - L1M4 LINE L1 -941 5205 4864 3 1044 237 214 0 0 chr13 60197532 60197574 -60086738 - ORR1D2 LTR MaLR -325 45 4 3 1044 1255 37 24 0 chr13 60198118 60198414 -60085898 + (CACAG)n Simple_repeat Simple_repeat 1 303 0 3 1044 1350 26 29 8 chr13 60198438 60198948 -60085364 + (CACAG)n Simple_repeat Simple_repeat 1 521 0 3 1044 242 367 55 50 chr13 60199211 60199412 -60084900 - MER58A DNA MER1_type 0 224 23 3 1044 459 249 56 94 chr13 60199504 60199717 -60084595 - B3 SINE B2 -9 207 3 3 1044 717 262 39 5 chr13 60199823 60200026 -60084286 + ORR1E LTR MaLR 3 212 -147 3 1044 332 336 0 87 chr13 60200045 60200159 -60084153 + PB1D10 SINE Alu 1 105 -12 3 1044 351 65 0 0 chr13 60200159 60200205 -60084107 + (CAA)n Simple_repeat Simple_repeat 2 47 0 3 1044 332 336 0 87 chr13 60200205 60200217 -60084095 + PB1D10 SINE Alu 106 116 -1 3 1044 1898 128 0 0 chr13 60200639 60200912 -60083400 - Lx2 LINE L1 -4 6993 6721 3 1044 770 239 66 11 chr13 60200955 60201137 -60083175 - B3 SINE B2 -24 192 1 3 1044 218 233 291 0 chr13 60202991 60203077 -60081235 - MER5A DNA MER1_type -67 122 12 3 1044 209 274 32 0 chr13 60203420 60203482 -60080830 + GA-rich Low_complexity Low_complexity 4 67 0 3 1044 231 36 0 0 chr13 60203487 60203515 -60080797 + (GGGGA)n Simple_repeat Simple_repeat 3 30 0 3 1044 584 59 39 0 chr13 60203577 60203679 -60080633 + (GA)n Simple_repeat Simple_repeat 1 106 0 3 1044 507 56 0 0 chr13 60203666 60203737 -60080575 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1044 229 297 17 37 chr13 60203737 60203842 -60080470 + MIRc SINE MIR 44 149 -119 3 1044 243 254 0 0 chr13 60203872 60203927 -60080385 - MLT1N2 LTR MaLR -33 529 475 3 1044 2506 86 3 12 chr13 60204928 60205258 -60079054 + ORR1A2 LTR MaLR 1 327 0 3 1044 268 228 17 17 chr13 60205853 60205911 -60078401 - ID2 SINE ID -24 59 2 3 1044 224 30 0 29 chr13 60205948 60205982 -60078330 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 3 1044 369 288 136 12 chr13 60205982 60206144 -60078168 - LTR16C LTR ERVL -2 487 306 3 1044 515 316 98 66 chr13 60206541 60206876 -60077436 - ORR1E LTR MaLR -4 355 10 3 1044 699 329 79 88 chr13 60206906 60207486 -60076826 - Kanga1b DNA Tc2 -78 701 127 3 1044 600 14 0 0 chr13 60207964 60208033 -60076279 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 3 1044 529 194 129 59 chr13 60208117 60208161 -60076151 + Lx5 LINE L1 6869 6909 -141 3 1044 474 18 0 0 chr13 60208161 60208216 -60076096 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1044 529 194 129 59 chr13 60208216 60208341 -60075971 + Lx5 LINE L1 6910 7050 0 3 1044 33 0 0 0 chr13 60208341 60208374 -60075938 + AT_rich Low_complexity Low_complexity 1 33 0 3 1044 899 241 210 37 chr13 60209362 60209822 -60074490 - Tigger7 DNA MER2_type -8 542 3 3 1044 207 0 0 0 chr13 60210721 60210744 -60073568 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1044 405 0 0 0 chr13 60211391 60211436 -60072876 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1044 414 0 0 0 chr13 60212169 60212215 -60072097 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1044 359 309 21 0 chr13 60212746 60212843 -60071469 - MER81 DNA AcHobo -11 103 5 3 1044 327 49 0 0 chr13 60213734 60213775 -60070537 + (TTCA)n Simple_repeat Simple_repeat 1 41 0 3 1044 455 317 113 27 chr13 60215437 60215622 -60068690 + B4A SINE B4 1 201 -91 3 1044 1886 170 12 82 chr13 60215833 60216236 -60068076 - ORR1B1 LTR MaLR 0 394 20 3 1044 405 0 0 0 chr13 60216246 60216291 -60068021 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 1044 812 232 0 0 chr13 60216300 60216442 -60067870 - B3A SINE B2 -48 150 9 3 1044 281 234 96 72 chr13 60217808 60217976 -60066336 + MIRc SINE MIR 42 218 -50 3 1044 33 0 0 0 chr13 60218169 60218202 -60066110 + AT_rich Low_complexity Low_complexity 1 33 0 3 1044 198 71 0 0 chr13 60218429 60218457 -60065855 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1044 557 233 30 107 chr13 60218467 60218664 -60065648 - B3A SINE B2 -16 182 1 3 1044 36 40 0 0 chr13 60218668 60218718 -60065594 + AT_rich Low_complexity Low_complexity 1 50 0 3 1044 8049 169 32 8 chr13 60219221 60220121 -60064191 + L1_Mur2 LINE L1 1068 2049 -3828 3 1044 234 0 0 0 chr13 60220121 60220147 -60064165 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1044 8049 169 35 8 chr13 60220147 60220159 -60064153 + L1_Mur2 LINE L1 2050 2079 -3798 3 1044 185 65 32 0 chr13 60220159 60220190 -60064122 + (CAA)n Simple_repeat Simple_repeat 1 32 0 3 1044 8049 169 35 8 chr13 60220190 60220878 -60063434 + L1_Mur2 LINE L1 2080 2774 -3103 3 1044 30 0 0 0 chr13 60220878 60220908 -60063404 + AT_rich Low_complexity Low_complexity 1 30 0 3 1044 9101 127 28 14 chr13 60220917 60222700 -60061612 + Lx4B LINE L1 5238 7057 -1 3 1044 271 0 0 49 chr13 60223055 60223096 -60061216 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1044 22 0 0 0 chr13 60226203 60226225 -60058087 + AT_rich Low_complexity Low_complexity 1 22 0 3 1044 290 87 0 21 chr13 60226668 60226715 -60057597 + (TTTTC)n Simple_repeat Simple_repeat 5 50 0 3 1044 243 0 0 0 chr13 60227603 60227630 -60056682 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1044 300 212 15 0 chr13 60228290 60228356 -60055956 - B1_Mur2 SINE Alu -43 106 40 3 1044 492 160 17 8 chr13 60228790 60228910 -60055402 + CT-rich Low_complexity Low_complexity 1 121 0 3 1044 803 336 64 19 chr13 60229096 60229472 -60054840 - MER45B DNA Tip100 -413 627 235 3 1044 242 273 91 0 chr13 60229640 60229695 -60054617 - MER20 DNA MER1_type -158 61 2 3 1044 482 201 22 22 chr13 60231620 60231633 -60052679 + polypurine Low_complexity Low_complexity 1 13 0 3 1044 3172 52 5 52 chr13 60231633 60232060 -60052252 - MTB_Mm LTR MaLR 0 407 1 3 1044 482 201 22 22 chr13 60232060 60232224 -60052088 + GA-rich Low_complexity Low_complexity 14 177 0 3 1044 398 304 138 66 chr13 60232374 60232830 -60051482 + Charlie8 DNA MER1_type 3 480 -1948 3 1044 364 252 107 13 chr13 60233380 60233431 -60050881 + ID_B1 SINE B4 54 216 -8 3 1044 520 143 133 0 chr13 60233431 60233529 -60050783 + B1_Mur1 SINE Alu 31 141 -8 3 1044 234 91 0 0 chr13 60233585 60233618 -60050694 + (CAAAG)n Simple_repeat Simple_repeat 2 34 0 3 1044 207 139 0 0 chr13 60234031 60234067 -60050245 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 3 1044 537 227 6 17 chr13 60234076 60234255 -60050057 + CT-rich Low_complexity Low_complexity 3 179 0 3 1044 3877 210 123 25 chr13 60236504 60237513 -60046799 - Lx7 LINE L1 -2 7694 6521 3 1044 253 296 68 48 chr13 60238291 60238394 -60045918 + B4A SINE B4 38 142 -150 3 1044 1209 233 22 122 chr13 60238396 60238806 -60045506 - MTE2a LTR MaLR 0 379 11 3 1044 858 156 0 0 chr13 60238913 60239041 -60045271 - MTC LTR MaLR 0 421 294 3 1044 588 29 0 0 chr13 60239687 60239757 -60044555 + (TG)n Simple_repeat Simple_repeat 1 70 0 3 1044 294 106 0 0 chr13 60239758 60239805 -60044507 + (GGGAGA)n Simple_repeat Simple_repeat 3 49 0 4 1044 721 276 109 69 chr13 60240207 60240296 -60044016 + B4 SINE B4 6 102 -190 4 1044 195 42 0 0 chr13 60240296 60240320 -60043992 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1044 721 276 109 69 chr13 60240320 60240506 -60043806 + B4 SINE B4 103 292 0 4 1044 450 250 0 0 chr13 60240506 60240642 -60043670 + (CA)n Simple_repeat Simple_repeat 1 136 0 4 1044 399 328 107 42 chr13 60240753 60241014 -60043298 + MT2A LTR ERVL 10 287 -246 4 1044 922 220 27 27 chr13 60241017 60241241 -60043071 - ORR1D1 LTR MaLR -146 228 5 4 1044 436 268 7 34 chr13 60241931 60241964 -60042348 - Lx8 LINE L1 -1568 5905 5873 4 1044 3199 73 0 2 chr13 60241964 60242364 -60041948 - MTB LTR MaLR -1 399 1 4 1044 436 268 7 34 chr13 60242364 60242477 -60041835 - Lx8 LINE L1 -1601 5872 5763 4 1044 717 250 0 0 chr13 60242483 60242623 -60041689 + B3 SINE B2 1 140 -76 4 1044 659 48 39 0 chr13 60242643 60242747 -60041565 + (TC)n Simple_repeat Simple_repeat 2 109 0 4 1044 480 221 43 80 chr13 60242754 60242916 -60041396 + RMER17C LTR ERVK 226 381 -29 4 1044 405 0 0 0 chr13 60242945 60242990 -60041322 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1044 326 199 16 0 chr13 60243003 60243089 -60041223 - L1M3 LINE L1 -475 5816 5729 4 1044 327 25 0 0 chr13 60243102 60243142 -60041170 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 1044 222 37 0 0 chr13 60243142 60243168 -60041144 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1044 1001 98 137 0 chr13 60243174 60243327 -60040985 - B2_Mm2 SINE B2 -17 178 5 4 1044 276 353 10 0 chr13 60244524 60244626 -60039686 + MLT1A1 LTR MaLR 300 402 -6 4 1044 189 139 0 0 chr13 60246124 60246167 -60038145 + (A)n Simple_repeat Simple_repeat 1 43 0 4 1044 281 278 188 51 chr13 60246721 60246918 -60037394 + L1MB5 LINE L1 5930 6153 -21 4 1044 268 43 43 0 chr13 60247388 60247434 -60036878 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 4 1044 269 197 15 0 chr13 60248931 60248997 -60035315 + CT-rich Low_complexity Low_complexity 1 67 0 4 1044 204 125 0 0 chr13 60249198 60249230 -60035082 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1044 229 262 0 32 chr13 60249230 60249282 -60035030 + C-rich Low_complexity Low_complexity 7 56 0 4 1044 183 42 0 0 chr13 60249704 60249728 -60034584 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1044 384 217 238 27 chr13 60249754 60249901 -60034411 - B3A SINE B2 -19 179 2 4 1044 209 139 47 0 chr13 60250636 60250679 -60033633 + GA-rich Low_complexity Low_complexity 2 46 0 4 1044 1506 28 0 0 chr13 60250679 60250858 -60033454 + (GAA)n Simple_repeat Simple_repeat 1 179 0 4 1044 396 0 0 0 chr13 60251770 60251814 -60032498 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1044 2380 165 25 108 chr13 60252334 60252844 -60031468 - RMER19B LTR ERVK -434 468 1 4 1044 672 236 199 0 chr13 60252852 60253013 -60031299 - B3 SINE B2 -1 215 23 4 1044 1748 144 112 15 chr13 60253150 60253488 -60030824 + MTD LTR MaLR 48 418 -1 4 1044 778 151 0 22 chr13 60253545 60253728 -60030584 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1044 2149 312 116 47 chr13 60253786 60255200 -60029112 + Lx8 LINE L1 5588 7098 -375 4 1044 386 335 12 42 chr13 60255376 60255541 -60028771 + RSINE1 SINE B4 2 161 -4 4 1044 2242 172 103 7 chr13 60255607 60256052 -60028260 + RLTR12B LTR ERVK 1 488 -40 4 1044 23 54 0 0 chr13 60256087 60256124 -60028188 + AT_rich Low_complexity Low_complexity 1 37 0 4 1044 389 81 16 0 chr13 60256130 60256192 -60028120 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1044 257 250 0 95 chr13 60256201 60256285 -60028027 - B4 SINE B4 -207 85 10 4 1044 227 262 84 32 chr13 60256338 60256492 -60027820 + L1M4b LINE L1 1618 1779 -5555 4 1044 375 23 0 0 chr13 60256572 60256616 -60027696 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1044 742 221 12 52 chr13 60256630 60256802 -60027510 - B3 SINE B2 -50 166 2 4 1044 301 357 116 13 chr13 60256830 60257148 -60027164 + L1M4b LINE L1 4651 5001 -2005 4 1044 276 137 0 0 chr13 60257176 60257227 -60027085 + (CAGGG)n Simple_repeat Simple_repeat 2 52 0 4 1044 219 206 0 0 chr13 60257425 60257469 -60026843 - MIRc SINE MIR -103 159 117 4 1044 180 312 128 13 chr13 60257437 60257515 -60026797 - MIRm SINE MIR -122 154 68 4 1044 222 37 0 0 chr13 60258756 60258783 -60025529 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1044 234 0 0 0 chr13 60258809 60258835 -60025477 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1044 287 196 94 85 chr13 60259632 60259701 -60024611 + MLT1A0 LTR MaLR 40 108 -257 4 1044 690 251 37 32 chr13 60259701 60259919 -60024393 + ID_B1 SINE B4 5 223 -1 4 1044 287 196 94 85 chr13 60259919 60259955 -60024357 + MLT1A0 LTR MaLR 109 146 -219 4 1044 255 169 133 17 chr13 60259981 60260041 -60024271 - RMER5 LTR ERV1 -7 527 461 4 1044 335 303 102 48 chr13 60260165 60260352 -60023960 - MLT1C LTR MaLR -117 350 154 4 1044 796 219 9 97 chr13 60260360 60260587 -60023725 + ORR1D2 LTR MaLR 156 362 -8 4 1044 33 56 0 0 chr13 60260681 60260735 -60023577 + AT_rich Low_complexity Low_complexity 1 54 0 4 1044 247 317 39 10 chr13 60260932 60261034 -60023278 - Lx7 LINE L1 -375 7321 7217 4 1044 1149 106 0 0 chr13 60261129 60261309 -60023003 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 4 1044 253 284 30 0 chr13 60261313 60261380 -60022932 - Lx7 LINE L1 -411 7285 7217 4 1044 1194 100 0 0 chr13 60261451 60261631 -60022681 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 4 1044 1389 61 0 0 chr13 60261647 60261827 -60022485 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 4 1044 1475 28 0 5 chr13 60261846 60262062 -60022250 + (TCCA)n Simple_repeat Simple_repeat 1 214 0 4 1044 2080 215 101 9 chr13 60262069 60262497 -60021815 - Lx6 LINE L1 -169 7291 6825 4 1044 1434 143 0 5 chr13 60263763 60263981 -60020331 - MTC LTR MaLR -2 419 203 4 1044 476 235 60 84 chr13 60263992 60264159 -60020153 + RSINE1 SINE B4 3 165 0 4 1044 204 40 0 0 chr13 60264160 60264185 -60020127 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 4 1044 2075 97 23 10 chr13 60264215 60264547 -60019765 - ORR1A2 LTR MaLR 0 327 1 4 1044 440 159 0 0 chr13 60264547 60264615 -60019697 - ORR1A2 LTR MaLR -259 68 1 4 1044 464 289 171 97 chr13 60264637 60265362 -60018950 + Charlie1a DNA MER1_type 578 1356 -99 4 1044 529 182 7 7 chr13 60265464 60265613 -60018699 + (CCCTAA)n Simple_repeat Simple_repeat 2 150 0 4 1044 354 70 0 17 chr13 60265725 60265783 -60018529 - B2_Mm2 SINE B2 -1 194 138 4 1044 1186 136 11 0 chr13 60265915 60266092 -60018220 - B2_Mm1t SINE B2 -14 179 1 4 1044 2009 204 123 9 chr13 60266755 60267220 -60017092 - Lx9 LINE L1 -594 7050 6533 4 1044 461 320 127 30 chr13 60267220 60267603 -60016709 + MLT1H LTR MaLR 37 489 -60 4 1044 517 243 99 20 chr13 60267960 60268111 -60016201 - RSINE1 SINE B4 0 165 3 4 1044 441 0 0 0 chr13 60268345 60268394 -60015918 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4 1044 191 114 29 0 chr13 60268394 60268429 -60015883 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 4 1044 4223 206 66 8 chr13 60268546 60269904 -60014408 - Lx5 LINE L1 -739 6721 5061 4 1044 774 162 14 29 chr13 60269907 60270047 -60014265 - B1_Mus2 SINE Alu 0 147 10 4 1044 1041 231 87 41 chr13 60270236 60270502 -60013810 + MTEa LTR MaLR 1 278 -101 4 1044 810 135 0 0 chr13 60271206 60271384 -60012928 + (TC)n Simple_repeat Simple_repeat 1 178 0 4 1044 612 215 37 44 chr13 60271384 60271520 -60012792 - B1_Mur2 SINE Alu -13 136 2 4 1044 806 202 6 0 chr13 60272034 60272212 -60012100 + GA-rich Low_complexity Low_complexity 2 180 0 4 1044 366 114 0 0 chr13 60274460 60274530 -60009782 + (CCAA)n Simple_repeat Simple_repeat 2 71 0 4 1044 28 48 0 0 chr13 60276143 60276185 -60008127 + AT_rich Low_complexity Low_complexity 1 42 0 4 1044 27 49 0 0 chr13 60277280 60277321 -60006991 + GC_rich Low_complexity Low_complexity 1 41 0 4 1044 1041 70 0 0 chr13 60279446 60279602 -60004710 + (TC)n Simple_repeat Simple_repeat 1 156 0 4 1044 203 147 0 0 chr13 60279624 60279658 -60004654 + (CCA)n Simple_repeat Simple_repeat 3 36 0 4 1044 293 229 121 30 chr13 60280416 60280515 -60003797 + B1_Mur1 SINE Alu 1 108 -41 4 1044 316 279 104 44 chr13 60280634 60280769 -60003543 - MER5A DNA MER1_type -5 184 42 4 1044 1095 139 0 0 chr13 60280785 60280965 -60003347 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1044 306 310 100 33 chr13 60281313 60281463 -60002849 - HAL1-3A_ME LINE L1 -420 2438 2279 4 1044 463 201 48 79 chr13 60281488 60281673 -60002639 - ORR1C2 LTR MaLR -89 295 116 4 1044 2037 132 70 42 chr13 60281674 60282031 -60002281 - ORR1B2 LTR MaLR 0 367 1 4 1044 738 32 0 0 chr13 60282281 60282374 -60001938 + (TC)n Simple_repeat Simple_repeat 1 93 0 4 1044 189 0 0 0 chr13 60282374 60282394 -60001918 + (CA)n Simple_repeat Simple_repeat 1 21 0 4 1044 349 328 8 23 chr13 60283708 60283836 -60000476 + RCHARR1 DNA MER1_type 37 162 -812 4 1044 665 282 53 0 chr13 60283852 60284022 -60000290 + RCHARR1 DNA MER1_type 225 403 -571 4 1044 303 275 14 0 chr13 60284038 60284107 -60000205 - B4A SINE B4 0 292 223 4 1044 515 332 75 5 chr13 60284174 60284374 -59999938 - B4A SINE B4 -76 216 3 4 1044 671 158 65 71 chr13 60284374 60284544 -59999768 + RCHARR1 DNA MER1_type 381 549 -425 4 1044 1250 181 6 116 chr13 60284564 60284882 -59999430 - RMER19C LTR ERVK 0 611 329 4 1044 1014 245 124 35 chr13 60284882 60285229 -59999083 + RCHARR1 DNA MER1_type 594 971 -3 4 1044 1394 172 41 35 chr13 60285341 60285660 -59998652 + RLTRETN_Mm LTR ERVK 2 322 0 4 1044 790 211 21 153 chr13 60286450 60286725 -59997587 + MTE2a LTR MaLR 3 253 -166 4 1044 453 268 9 26 chr13 60286725 60286840 -59997472 + RMER2 LTR ERV1 4 116 -451 4 1044 581 228 97 120 chr13 60286897 60287156 -59997156 + RMER2 LTR ERV1 288 540 -27 4 1044 550 218 97 8 chr13 60287180 60287314 -59996998 + MTE2a LTR MaLR 234 379 0 4 1044 4322 42 4 13 chr13 60287614 60288146 -59996166 - L1Md_F2 LINE L1 0 6582 6056 4 1044 230 338 176 42 chr13 60288163 60288401 -59995911 + ORR1E LTR MaLR 90 359 0 4 1044 367 256 12 0 chr13 60288519 60288605 -59995707 + PB1D10 SINE Alu 23 109 -8 4 1044 423 0 0 0 chr13 60289090 60289137 -59995175 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1044 237 245 50 0 chr13 60289170 60289309 -59995003 + (TA)n Simple_repeat Simple_repeat 2 147 0 5 1044 3058 29 0 0 chr13 60289321 60289667 -59994645 - ORR1A0 LTR MaLR 0 346 1 5 1044 603 0 0 0 chr13 60290747 60290814 -59993498 + (GA)n Simple_repeat Simple_repeat 1 67 0 5 1044 181 28 26 77 chr13 60291163 60291202 -59993110 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 5 1044 192 77 0 0 chr13 60291818 60291844 -59992468 + (TTCC)n Simple_repeat Simple_repeat 3 28 0 5 1044 759 78 0 0 chr13 60291845 60291948 -59992364 + (TTTCC)n Simple_repeat Simple_repeat 2 104 0 5 1044 270 81 0 0 chr13 60291949 60291986 -59992326 + (CCCCCT)n Simple_repeat Simple_repeat 3 39 0 5 1044 888 101 0 0 chr13 60291986 60292115 -59992197 + (TTTC)n Simple_repeat Simple_repeat 1 129 0 5 1044 462 331 64 52 chr13 60292528 60292718 -59991594 - B4A SINE B4 -1 291 99 5 1044 252 0 0 0 chr13 60292718 60292746 -59991566 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1044 462 331 64 52 chr13 60292746 60292804 -59991508 - B4A SINE B4 -194 98 40 5 1045 298 140 35 0 chr13 60293494 60293551 -59990761 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1045 609 184 0 32 chr13 60293553 60293738 -59990574 + (TATG)n Simple_repeat Simple_repeat 1 179 0 5 1045 738 210 0 0 chr13 60293744 60294074 -59990238 + (TG)n Simple_repeat Simple_repeat 1 330 0 5 1045 266 289 55 97 chr13 60296522 60296687 -59987625 - RLTR15 LTR ERVK -23 336 179 5 1045 197 280 104 57 chr13 60297913 60298019 -59986293 + L2c LINE L2 2488 2598 -821 5 1045 2054 108 3 74 chr13 60298058 60298409 -59985903 - IAPLTR1a_Mm LTR ERVK -11 326 1 5 1045 59168 11 3 5 chr13 60298409 60304891 -59979421 - IAPEz-int LTR ERVK 0 6481 9 5 1045 2065 117 3 72 chr13 60304891 60305251 -59979061 - IAPLTR1a_Mm LTR ERVK -2 335 1 5 1045 242 316 82 76 chr13 60305583 60305754 -59978558 + MLT1G3 LTR MaLR 423 594 -1 5 1045 1084 77 0 0 chr13 60305889 60306032 -59978280 - B1_Mus1 SINE Alu 0 148 6 5 1045 514 198 8 101 chr13 60306045 60306174 -59978138 + URR1B DNA MER1_type 92 208 -17 5 1045 182 233 15 77 chr13 60306353 60306418 -59977894 + L2c LINE L2 3293 3353 -34 5 1045 261 0 0 0 chr13 60306700 60306729 -59977583 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1045 1845 211 195 6 chr13 60307576 60307953 -59976359 + Lx6 LINE L1 6883 7334 -126 5 1045 414 0 0 0 chr13 60307953 60307999 -59976313 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 1045 1845 211 195 6 chr13 60307999 60308099 -59976213 + Lx6 LINE L1 7335 7449 -11 5 1045 231 193 40 48 chr13 60308138 60308263 -59976049 + A-rich Low_complexity Low_complexity 3 126 0 5 1045 183 214 179 0 chr13 60309526 60309582 -59974730 + L3 LINE CR1 4158 4223 -266 5 1045 209 304 18 58 chr13 60310617 60310713 -59973599 + CT-rich Low_complexity Low_complexity 77 165 0 5 1045 1371 85 5 16 chr13 60310713 60310905 -59973407 - B2_Mm2 SINE B2 -5 190 1 5 1045 209 304 18 58 chr13 60310905 60310979 -59973333 + polypyrimidine Low_complexity Low_complexity 2 76 0 5 1045 567 0 0 0 chr13 60311141 60311204 -59973108 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 1045 537 30 0 0 chr13 60312464 60312531 -59971781 + (TC)n Simple_repeat Simple_repeat 1 67 0 5 1045 420 20 0 0 chr13 60312531 60312579 -59971733 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1045 2524 197 27 116 chr13 60313002 60313673 -59970639 + RMER19C LTR ERVK 1 611 0 5 1045 344 320 142 7 chr13 60316006 60316154 -59968158 - MER2 DNA MER2_type -177 168 1 5 1045 829 293 0 9 chr13 60317012 60317222 -59967090 + ID_B1 SINE B4 10 217 -7 5 1045 232 146 73 0 chr13 60317492 60317547 -59966765 + G-rich Low_complexity Low_complexity 4 62 0 5 1045 4273 82 7 0 chr13 60317618 60318182 -59966130 - Lx3_Mus LINE L1 0 7009 6442 5 1045 2210 86 0 19 chr13 60318182 60318491 -59965821 + Lx3_Mus LINE L1 6122 6424 -585 5 1045 838 291 19 0 chr13 60319129 60319339 -59964973 + B3 SINE B2 3 216 0 5 1045 426 328 67 60 chr13 60319369 60319638 -59964674 + B4 SINE B4 4 274 -18 5 1045 180 0 0 0 chr13 60319657 60319677 -59964635 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 1045 249 341 0 12 chr13 60319704 60319790 -59964522 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 1045 227 312 73 0 chr13 60319814 60319910 -59964402 + MER2 DNA MER2_type 90 192 -153 5 1045 503 252 32 32 chr13 60319942 60320065 -59964247 + B4A SINE B4 161 283 -9 5 1045 1980 133 9 66 chr13 60320208 60320634 -59963678 + RMER17C LTR ERVK 1 402 -8 5 1045 3879 114 35 35 chr13 60320642 60321491 -59962821 - RMER17A LTR ERVK -2 887 1 5 1045 1016 235 14 9 chr13 60321564 60321779 -59962533 - B3 SINE B2 0 216 1 5 1045 8069 39 1 13 chr13 60321912 60322892 -59961420 + L1Md_F2 LINE L1 5615 6582 0 5 1045 180 111 0 0 chr13 60323038 60323065 -59961247 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1045 1666 202 29 52 chr13 60323078 60323460 -59960852 + ORR1C2 LTR MaLR 1 373 -11 5 1045 432 0 0 0 chr13 60324310 60324358 -59959954 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1045 247 203 61 30 chr13 60324969 60325035 -59959277 - MLT1E2 LTR MaLR -11 616 549 5 1045 287 344 68 49 chr13 60325061 60325114 -59959198 - MLT1E2 LTR MaLR -173 454 407 5 1045 1425 176 93 71 chr13 60325114 60325480 -59958832 + ORR1D1 LTR MaLR 1 374 0 5 1045 287 344 68 49 chr13 60325480 60325588 -59958724 - MLT1E2 LTR MaLR -221 406 290 5 1045 417 299 110 0 chr13 60326304 60326431 -59957881 - B1F SINE Alu -8 141 1 5 1045 384 226 42 25 chr13 60326440 60326558 -59957754 - L1MA5 LINE L1 -27 6273 6154 5 1045 411 56 0 0 chr13 60326881 60326935 -59957377 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1045 204 217 0 0 chr13 60327846 60327892 -59956420 + C-rich Low_complexity Low_complexity 4 49 0 5 1045 192 77 0 0 chr13 60328209 60328235 -59956077 + (TGGGGG)n Simple_repeat Simple_repeat 2 27 0 5 1045 491 45 15 0 chr13 60329606 60329672 -59954640 + (TTCC)n Simple_repeat Simple_repeat 4 70 0 5 1045 438 20 0 0 chr13 60329670 60329721 -59954591 + (TC)n Simple_repeat Simple_repeat 1 51 0 5 1045 356 296 44 36 chr13 60329985 60330122 -59954190 + MLT1L LTR MaLR 345 482 -128 5 1045 654 165 10 0 chr13 60330923 60331026 -59953286 + (TCTCTG)n Simple_repeat Simple_repeat 5 108 0 5 1045 815 123 12 0 chr13 60331026 60331197 -59953115 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 5 1045 315 0 0 0 chr13 60331273 60331308 -59953004 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1045 221 154 0 0 chr13 60331384 60331423 -59952889 + (CAT)n Simple_repeat Simple_repeat 2 40 0 5 1045 548 65 0 13 chr13 60331482 60331560 -59952752 + (GGAA)n Simple_repeat Simple_repeat 3 79 0 5 1045 1479 291 68 25 chr13 60331999 60332587 -59951725 + Lx8 LINE L1 6861 7473 0 5 1045 486 0 0 0 chr13 60333200 60333254 -59951058 + (TC)n Simple_repeat Simple_repeat 1 54 0 5 1045 333 0 0 0 chr13 60333378 60333415 -59950897 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1045 210 262 71 39 chr13 60334156 60334283 -59950029 - MIR SINE MIR -43 219 89 5 1045 24 77 0 0 chr13 60334601 60334653 -59949659 + AT_rich Low_complexity Low_complexity 1 52 0 5 1045 423 0 0 0 chr13 60334677 60334724 -59949588 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1045 486 0 0 0 chr13 60334724 60334777 -59949535 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1045 335 281 0 40 chr13 60335942 60336042 -59948270 + RSINE1 SINE B4 2 97 -68 5 1045 329 272 136 0 chr13 60336137 60336240 -59948072 - B3 SINE B2 -92 124 8 5 1045 1973 182 63 28 chr13 60336998 60337428 -59946884 - Lx LINE L1 0 6654 6210 5 1045 3650 83 13 29 chr13 60337412 60337934 -59946378 + Lx LINE L1 5596 6109 -545 5 1045 236 192 0 0 chr13 60338377 60338429 -59945883 + A-rich Low_complexity Low_complexity 3 54 0 5 1045 209 33 33 0 chr13 60338468 60338498 -59945814 + (TTG)n Simple_repeat Simple_repeat 2 32 0 5 1045 230 269 52 31 chr13 60338777 60338873 -59945439 - Lx8 LINE L1 -170 7303 7206 5 1045 1169 284 45 0 chr13 60338904 60339238 -59945074 - Lx8 LINE L1 -360 7113 6765 5 1045 348 238 72 59 chr13 60339264 60339416 -59944896 - L1MEc LINE L1 -4460 1940 1787 5 1045 699 241 73 36 chr13 60339422 60339642 -59944670 + Lx9 LINE L1 6283 6510 -1134 5 1045 1055 312 122 52 chr13 60340385 60341386 -59942926 + L1_Mur3 LINE L1 4614 5689 -191 5 1045 2787 25 6 33 chr13 60341386 60341722 -59942590 - IAPLTR2b LTR ERVK 0 327 1 5 1045 1055 312 122 52 chr13 60341722 60341787 -59942525 + L1_Mur3 LINE L1 5690 5754 -126 5 1045 2025 99 8 111 chr13 60341800 60342162 -59942150 - ORR1A2 LTR MaLR -2 325 1 5 1045 31 0 0 0 chr13 60342722 60342753 -59941559 + AT_rich Low_complexity Low_complexity 1 31 0 5 1045 624 212 0 0 chr13 60342797 60342934 -59941378 + (TA)n Simple_repeat Simple_repeat 1 137 0 5 1045 374 262 64 75 chr13 60343006 60343179 -59941133 - Tigger7 DNA MER2_type -12 2479 2309 5 1045 198 0 0 0 chr13 60344148 60344170 -59940142 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1045 405 0 0 0 chr13 60344792 60344837 -59939475 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1045 402 21 0 0 chr13 60344837 60344883 -59939429 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 1045 840 213 52 57 chr13 60345139 60345488 -59938824 + RLTR15 LTR ERVK 1 347 -12 5 1045 588 278 66 0 chr13 60345603 60345801 -59938511 + B3 SINE B2 1 211 -5 5 1045 540 250 126 28 chr13 60346275 60346489 -59937823 - MER2 DNA MER2_type -110 235 1 5 1045 296 283 8 40 chr13 60347781 60347906 -59936406 + (CATATA)n Simple_repeat Simple_repeat 5 125 0 5 1045 1116 62 14 0 chr13 60348326 60348470 -59935842 - B1_Mus1 SINE Alu -1 147 2 5 1045 234 0 0 0 chr13 60348659 60348685 -59935627 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1045 23 78 0 0 chr13 60348706 60348757 -59935555 + AT_rich Low_complexity Low_complexity 1 51 0 5 1045 435 360 6 0 chr13 60348896 60349074 -59935238 + C-rich Low_complexity Low_complexity 1 179 0 5 1045 2101 150 133 28 chr13 60349399 60349709 -59934603 + RLTR24 LTR ERV1 6 336 -193 5 1045 378 0 0 0 chr13 60349709 60349751 -59934561 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1045 2101 150 133 28 chr13 60349751 60349912 -59934400 + RLTR24 LTR ERV1 337 526 -3 5 1045 198 0 0 0 chr13 60351457 60351479 -59932833 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1045 239 271 0 94 chr13 60351987 60352093 -59932219 - MLT1A0 LTR MaLR -246 119 24 5 1045 1046 199 5 38 chr13 60353054 60353285 -59931027 + Lx9 LINE L1 6721 7050 -594 5 1045 1265 255 49 12 chr13 60353428 60353773 -59930539 + Lx9 LINE L1 7058 7415 -229 5 1045 291 255 60 29 chr13 60353831 60353968 -59930344 + RLTR18B LTR ERVK 320 521 -95 6 1045 415 167 12 37 chr13 60354034 60354115 -59930197 + ORR1D1 LTR MaLR 26 104 -270 6 1045 567 295 89 42 chr13 60354105 60354342 -59929970 - B4A SINE B4 -43 249 2 6 1045 678 283 128 30 chr13 60355592 60355920 -59928392 + MTEa LTR MaLR 3 362 -17 6 1045 210 105 0 0 chr13 60357036 60357074 -59927238 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 6 1045 465 19 0 0 chr13 60357091 60357145 -59927167 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1045 204 188 0 0 chr13 60357152 60357184 -59927128 + polypurine Low_complexity Low_complexity 1 32 0 6 1045 324 0 0 0 chr13 60357644 60357680 -59926632 + (TTA)n Simple_repeat Simple_repeat 1 36 0 6 1045 337 270 24 59 chr13 60357754 60357923 -59926389 - RSINE1 SINE B4 -2 163 1 6 1045 207 182 0 0 chr13 60358317 60358350 -59925962 + T-rich Low_complexity Low_complexity 5 37 0 6 1045 371 20 39 0 chr13 60358761 60358812 -59925500 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 6 1045 304 179 13 13 chr13 60359123 60359202 -59925110 + CT-rich Low_complexity Low_complexity 3 81 0 6 1045 714 44 0 0 chr13 60359202 60359292 -59925020 + (TCCCC)n Simple_repeat Simple_repeat 3 92 0 6 1045 271 238 63 0 chr13 60359537 60359600 -59924712 - RSINE1 SINE B4 -18 147 81 6 1045 588 291 84 9 chr13 60360082 60360297 -59924015 + RCHARR1 DNA MER1_type 82 312 -662 6 1045 1021 292 111 45 chr13 60360378 60360912 -59923400 + Lx9 LINE L1 7074 7642 -2 6 1045 1908 238 90 10 chr13 60360985 60361587 -59922725 + RCHARR1 DNA MER1_type 318 967 -7 6 1045 505 305 38 19 chr13 60361726 60361883 -59922429 - MER21B LTR ERV1 -560 303 144 6 1045 475 256 81 52 chr13 60362104 60362314 -59921998 + B3 SINE B2 1 216 0 6 1045 349 283 165 16 chr13 60363215 60363463 -59920849 + L1M3 LINE L1 4252 4542 -1604 6 1045 297 51 0 0 chr13 60363486 60363525 -59920787 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1045 304 26 0 0 chr13 60364411 60364449 -59919863 - tRNA-Gly-GGA tRNA tRNA -37 38 1 6 1045 342 280 83 0 chr13 60364517 60364649 -59919663 - L1MA6 LINE L1 -369 5931 5789 6 1045 334 289 247 9 chr13 60364654 60364865 -59919447 + L1MA6 LINE L1 5913 6175 -125 6 1045 2488 109 3 63 chr13 60364865 60365247 -59919065 + RLTR10D LTR ERVK 1 359 0 6 1045 334 289 247 9 chr13 60365247 60365262 -59919050 + L1MA6 LINE L1 6176 6192 -108 6 1045 4583 69 5 28 chr13 60365265 60365863 -59918449 - MT2B2 LTR ERVL 0 584 1 6 1045 702 249 15 45 chr13 60365927 60366129 -59918183 + B3A SINE B2 2 197 -1 6 1045 233 75 75 0 chr13 60366813 60366866 -59917446 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 6 1045 333 0 0 0 chr13 60367170 60367207 -59917105 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 1045 1500 170 39 92 chr13 60367508 60367702 -59916610 - RMER17C LTR ERVK 0 410 215 6 1045 387 0 0 0 chr13 60367702 60367745 -59916567 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1045 1500 170 39 92 chr13 60367745 60367983 -59916329 - RMER17C LTR ERVK -196 214 1 6 1045 240 35 0 0 chr13 60368692 60368721 -59915591 + (GGA)n Simple_repeat Simple_repeat 2 30 0 6 1045 498 33 0 0 chr13 60368728 60368788 -59915524 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 1045 737 87 72 0 chr13 60369423 60369561 -59914751 - RMER17C LTR ERVK -261 149 2 6 1045 252 0 0 0 chr13 60370848 60370876 -59913436 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1045 200 143 24 0 chr13 60371285 60371327 -59912985 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1045 467 275 137 19 chr13 60371373 60371584 -59912728 - B4A SINE B4 0 292 57 6 1045 266 280 80 0 chr13 60372022 60372122 -59912190 - MER5A1 DNA MER1_type -57 109 2 6 1045 306 300 55 113 chr13 60372587 60372880 -59911432 + B4A SINE B4 2 277 -15 6 1045 606 75 0 0 chr13 60372908 60373001 -59911311 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 1045 336 232 12 0 chr13 60373561 60373643 -59910669 + RLTR25B LTR ERVK 946 1028 0 6 1045 398 275 189 5 chr13 60374250 60374440 -59909872 - RMER15 LTR ERVL -15 560 336 6 1045 315 0 0 0 chr13 60375295 60375330 -59908982 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1045 288 242 36 108 chr13 60375338 60375441 -59908871 - B4 SINE B4 -1 291 197 6 1045 3944 170 135 68 chr13 60375441 60376047 -59908265 - RLTR25A LTR ERVK 0 1103 395 6 1045 222 118 0 0 chr13 60376047 60376081 -59908231 + (CTTG)n Simple_repeat Simple_repeat 2 35 0 6 1045 3944 170 135 68 chr13 60376081 60376489 -59907823 - RLTR25A LTR ERVK -709 394 21 6 1045 486 282 117 37 chr13 60376542 60376730 -59907582 - B4 SINE B4 -89 203 1 6 1045 347 220 29 48 chr13 60376956 60377061 -59907251 + MLT1A1 LTR MaLR 306 408 0 6 1045 481 252 7 7 chr13 60379260 60379564 -59904748 + (CA)n Simple_repeat Simple_repeat 1 304 0 6 1045 320 241 93 8 chr13 60379895 60379937 -59904375 - MLT2B2 LTR ERVL -399 134 7 6 1045 497 193 0 0 chr13 60379937 60380020 -59904292 - MTEb LTR MaLR -290 89 7 6 1045 1191 146 51 19 chr13 60380380 60380497 -59903815 - Lx2 LINE L1 0 6997 6884 6 1045 204 40 0 0 chr13 60380497 60380522 -59903790 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 6 1045 1191 146 51 19 chr13 60380522 60380620 -59903692 - Lx2 LINE L1 -114 6883 6776 6 1045 7251 107 12 15 chr13 60380620 60381753 -59902559 - Lx2 LINE L1 -354 6643 5512 6 1045 7076 78 45 12 chr13 60381724 60383428 -59900884 - L1VL4 LINE L1 -1606 1953 194 6 1045 216 284 30 0 chr13 60383928 60383995 -59900317 + GA-rich Low_complexity Low_complexity 5 73 0 6 1045 534 247 71 18 chr13 60384158 60384327 -59899985 - L1MA7 LINE L1 -10 6281 6104 6 1045 279 0 0 0 chr13 60385151 60385182 -59899130 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1045 472 365 61 29 chr13 60385215 60385494 -59898818 - B4A SINE B4 -3 289 2 6 1045 263 340 91 26 chr13 60385938 60386092 -59898220 + RLTR42-int LTR ERVK 1237 1400 -4122 6 1045 892 270 93 38 chr13 60386836 60387232 -59897080 - MTD LTR MaLR -1 418 1 6 1045 213 39 0 0 chr13 60387882 60387908 -59896404 + (TTA)n Simple_repeat Simple_repeat 2 27 0 6 1045 301 171 80 0 chr13 60388726 60388814 -59895498 + (CAGAGA)n Simple_repeat Simple_repeat 6 100 0 6 1045 1348 109 16 10 chr13 60389854 60390048 -59894264 - B2_Mm2 SINE B2 0 195 1 6 1045 307 105 17 17 chr13 60390943 60391001 -59893311 + (AGGGGG)n Simple_repeat Simple_repeat 4 61 0 6 1045 552 322 16 37 chr13 60391951 60392141 -59892171 - B4A SINE B4 -106 186 1 6 1045 1161 23 0 0 chr13 60393781 60393910 -59890402 + L1Md_A LINE L1 5458 5586 -297 6 1045 8934 15 1 0 chr13 60393910 60394905 -59889407 + L1Md_A LINE L1 5587 6582 0 6 1045 610 307 38 36 chr13 60394909 60395096 -59889216 + B3A SINE B2 27 214 -2 6 1045 180 111 0 0 chr13 60395096 60395123 -59889189 + (TATG)n Simple_repeat Simple_repeat 2 28 0 6 1045 30 0 0 0 chr13 60395123 60395153 -59889159 + AT_rich Low_complexity Low_complexity 1 30 0 6 1045 786 303 34 66 chr13 60395284 60395531 -59888781 - MLT2B3 LTR ERVL -105 565 327 6 1045 1037 247 5 5 chr13 60395531 60395751 -59888561 - ID_B1 SINE B4 -4 220 1 6 1045 742 302 34 68 chr13 60395751 60395781 -59888531 - MLT2B3 LTR ERVL -391 326 306 6 1045 243 239 0 0 chr13 60395875 60395942 -59888370 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1045 876 295 49 22 chr13 60395964 60396231 -59888081 - B4A SINE B4 -17 275 2 6 1045 218 32 0 31 chr13 60396249 60396281 -59888031 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1045 617 304 0 7 chr13 60396299 60396445 -59887867 - RSINE1 SINE B4 -19 146 2 6 1045 679 268 48 16 chr13 60396843 60397029 -59887283 + Lx8 LINE L1 6261 6452 -1021 6 1045 617 233 172 46 chr13 60397032 60397293 -59887019 + Lx8 LINE L1 7180 7473 0 6 1045 448 282 86 67 chr13 60398896 60399211 -59885101 - L1MA10 LINE L1 -3 6331 6011 6 1045 378 108 0 0 chr13 60399289 60399354 -59884958 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 6 1045 1463 126 14 0 chr13 60399581 60399803 -59884509 - URR1B DNA MER1_type 0 225 1 6 1045 433 287 40 40 chr13 60400894 60400917 -59883395 - B1F SINE Alu 0 149 128 6 1045 213 39 0 0 chr13 60400917 60400943 -59883369 + (CCCTAA)n Simple_repeat Simple_repeat 3 28 0 6 1045 433 287 40 40 chr13 60400943 60401068 -59883244 - B1F SINE Alu -22 127 1 6 1045 333 214 106 12 chr13 60401578 60401663 -59882649 - PB1D10 SINE Alu -21 96 4 6 1045 204 273 28 66 chr13 60401752 60401858 -59882454 + L2a LINE L2 3287 3388 -38 6 1045 249 146 0 0 chr13 60402060 60402108 -59882204 + (TCCCC)n Simple_repeat Simple_repeat 2 49 0 6 1045 2920 135 39 29 chr13 60402394 60402914 -59881398 + RLTR11A2 LTR ERVK 1 525 -2 6 1045 1267 108 11 0 chr13 60403845 60404021 -59880291 + B2_Mm1t SINE B2 2 179 -14 6 1045 377 90 0 46 chr13 60404068 60404180 -59880132 + B2_Mm2 SINE B2 47 189 -6 6 1045 2620 274 35 10 chr13 60404214 60404928 -59879384 + Lx8 LINE L1 6223 6954 -519 6 1045 204 97 0 0 chr13 60405743 60405774 -59878538 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1045 828 161 8 0 chr13 60405792 60406157 -59878155 + (CA)n Simple_repeat Simple_repeat 1 368 0 6 1045 259 302 29 98 chr13 60406717 60406957 -59877355 + MTE2b LTR MaLR 92 331 -48 6 1045 1729 198 83 17 chr13 60407162 60407522 -59876790 + ORR1C2 LTR MaLR 1 384 0 6 1045 450 0 0 0 chr13 60407558 60407608 -59876704 + (CCAA)n Simple_repeat Simple_repeat 1 50 0 6 1045 441 324 256 0 chr13 60408593 60408800 -59875512 + MER44B DNA MER2_type 30 289 -261 6 1045 219 296 63 22 chr13 60410600 60410679 -59873633 - MIR SINE MIR -107 169 79 6 1045 837 218 14 0 chr13 60411811 60411958 -59872354 + RSINE1 SINE B4 4 152 -13 6 1045 255 61 0 0 chr13 60411981 60412014 -59872298 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 6 1045 22 35 0 0 chr13 60412014 60412043 -59872269 + AT_rich Low_complexity Low_complexity 1 29 0 6 1045 1033 238 0 28 chr13 60412462 60412482 -59871830 - B3 SINE B2 -8 208 193 6 1045 651 84 0 0 chr13 60412482 60412577 -59871735 + (TTATA)n Simple_repeat Simple_repeat 5 99 0 6 1045 1033 238 0 28 chr13 60412577 60412768 -59871544 - B3 SINE B2 -24 192 3 6 1045 1219 206 75 116 chr13 60413040 60413429 -59870883 - ORR1D1 LTR MaLR -1 373 1 6 1045 25 0 0 0 chr13 60413539 60413564 -59870748 + AT_rich Low_complexity Low_complexity 1 25 0 6 1045 456 19 0 0 chr13 60413633 60413686 -59870626 + (TC)n Simple_repeat Simple_repeat 1 53 0 6 1045 234 0 0 0 chr13 60413686 60413711 -59870601 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1045 446 270 8 8 chr13 60414633 60414906 -59869406 + (CA)n Simple_repeat Simple_repeat 1 273 0 7 1045 23 33 0 0 chr13 60415227 60415257 -59869055 + AT_rich Low_complexity Low_complexity 1 30 0 7 1045 267 103 0 0 chr13 60415258 60415297 -59869015 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 7 1045 266 195 13 0 chr13 60415314 60415391 -59868921 + GA-rich Low_complexity Low_complexity 1 78 0 7 1045 385 312 120 7 chr13 60415395 60415537 -59868775 - B3A SINE B2 -39 159 2 7 1045 292 336 71 33 chr13 60415698 60415938 -59868374 - L2a LINE L2 -78 3348 3100 7 1045 393 235 12 0 chr13 60415942 60416027 -59868285 + MTC LTR MaLR 1 86 -335 7 1045 375 247 236 45 chr13 60416028 60416185 -59868127 + B4A SINE B4 106 292 0 7 1045 422 259 7 0 chr13 60416201 60416344 -59867968 + (CA)n Simple_repeat Simple_repeat 1 144 0 7 1045 358 299 86 38 chr13 60416351 60416560 -59867752 - RMER12 LTR ERVK -334 988 770 7 1045 321 245 0 0 chr13 60416560 60416662 -59867650 + (CA)n Simple_repeat Simple_repeat 2 103 0 7 1045 272 339 167 37 chr13 60416705 60416950 -59867362 - L2a LINE L2 -575 2844 2568 7 1045 704 206 15 61 chr13 60417534 60417730 -59866582 + ORR1E LTR MaLR 5 191 -168 7 1045 308 242 107 16 chr13 60417730 60417852 -59866460 - HAL1-3A_ME LINE L1 -744 2114 1982 7 1045 702 261 16 5 chr13 60417875 60418064 -59866248 + ORR1E LTR MaLR 169 359 0 7 1045 914 345 71 16 chr13 60418195 60418634 -59865678 - MER82 DNA MER2_type -3 650 188 7 1045 250 265 77 101 chr13 60418763 60418931 -59865381 + L2 LINE L2 473 636 -2783 7 1045 764 362 133 18 chr13 60419661 60420494 -59863818 + L2 LINE L2 2024 2952 -467 7 1045 619 229 178 11 chr13 60421039 60421224 -59863088 + B3 SINE B2 1 216 0 7 1045 511 323 105 27 chr13 60421366 60421624 -59862688 + B4A SINE B4 9 286 -6 7 1045 450 243 57 21 chr13 60422631 60422824 -59861488 + L1MA8 LINE L1 6050 6249 -42 7 1045 809 267 62 77 chr13 60422899 60423171 -59861141 + B4A SINE B4 2 269 -23 7 1045 474 96 0 0 chr13 60423171 60423244 -59861068 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 1045 253 263 25 0 chr13 60423579 60423664 -59860648 + MER5A DNA MER1_type 4 92 -97 7 1046 669 270 65 20 chr13 60424871 60425071 -59859241 + B3 SINE B2 2 210 -6 7 1046 214 267 47 47 chr13 60425185 60425291 -59859021 + GA-rich Low_complexity Low_complexity 1 106 0 7 1046 521 207 0 21 chr13 60425305 60425448 -59858864 + GA-rich Low_complexity Low_complexity 1 140 0 7 1046 433 233 0 20 chr13 60425470 60425619 -59858693 + GA-rich Low_complexity Low_complexity 2 147 0 7 1046 21 0 0 0 chr13 60426268 60426289 -59858023 + AT_rich Low_complexity Low_complexity 1 21 0 7 1046 1620 229 36 133 chr13 60426758 60427105 -59857207 + Lx8 LINE L1 6585 6879 -594 7 1046 5407 127 68 8 chr13 60427105 60427956 -59856356 - RMER19B LTR ERVK 0 902 1 7 1046 1620 229 36 133 chr13 60427956 60428156 -59856156 + Lx8 LINE L1 6880 7079 -394 7 1046 1167 163 108 167 chr13 60428164 60428488 -59855824 - RMER19B LTR ERVK -597 305 1 7 1046 423 253 109 7 chr13 60428721 60428868 -59855444 + MLT1D LTR MaLR 344 505 0 7 1046 239 336 42 25 chr13 60429157 60429276 -59855036 + MER3 DNA MER1_type 46 166 -43 7 1046 818 161 170 11 chr13 60429296 60429478 -59854834 - B3 SINE B2 -5 211 1 7 1046 2012 120 106 78 chr13 60430123 60430585 -59853727 - IAPLTR2_Mm LTR ERVK 0 475 1 7 1046 2553 75 0 0 chr13 60431085 60431404 -59852908 - ORR1A2 LTR MaLR -8 319 1 7 1046 449 17 0 17 chr13 60432503 60432562 -59851750 + (CA)n Simple_repeat Simple_repeat 1 58 0 7 1046 508 256 8 30 chr13 60434466 60434599 -59849713 + RSINE1 SINE B4 32 161 -4 7 1046 405 0 0 0 chr13 60434608 60434653 -59849659 + (TAA)n Simple_repeat Simple_repeat 2 46 0 7 1046 304 297 45 81 chr13 60435157 60435188 -59849124 - B2_Mm2 SINE B2 -4 191 161 7 1046 207 0 0 0 chr13 60435188 60435211 -59849101 + (TG)n Simple_repeat Simple_repeat 1 23 0 7 1046 1267 72 0 11 chr13 60435211 60435392 -59848920 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1046 379 289 93 62 chr13 60435392 60435557 -59848755 - B3A SINE B2 -35 160 1 7 1046 370 355 46 42 chr13 60436910 60437172 -59847140 + L1ME1 LINE L1 5808 6070 -109 7 1046 1108 194 24 9 chr13 60437237 60437450 -59846862 + B3 SINE B2 1 216 0 7 1046 342 0 0 0 chr13 60438614 60438652 -59845660 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 7 1046 462 272 0 0 chr13 60439065 60439305 -59845007 + (TG)n Simple_repeat Simple_repeat 1 240 0 7 1046 474 176 0 0 chr13 60439306 60439425 -59844887 + GA-rich Low_complexity Low_complexity 2 120 0 7 1046 946 252 86 83 chr13 60440464 60440623 -59843689 + ORR1E LTR MaLR 6 144 -215 7 1046 550 270 32 73 chr13 60440623 60440843 -59843469 - B3 SINE B2 -5 211 1 7 1046 946 252 86 83 chr13 60440843 60441034 -59843278 + ORR1E LTR MaLR 145 357 -2 7 1046 873 259 96 0 chr13 60441059 60441279 -59843033 + MLT1A0 LTR MaLR 38 278 -87 7 1046 910 249 0 25 chr13 60442166 60442368 -59841944 + B3A SINE B2 1 197 -1 7 1046 256 200 35 52 chr13 60442523 60442581 -59841731 + PB1D9 SINE Alu 3 59 -61 7 1046 314 0 0 161 chr13 60442582 60442744 -59841568 + (CAGAG)n Simple_repeat Simple_repeat 5 140 0 7 1046 315 161 0 0 chr13 60442745 60442801 -59841511 + (CAGAGA)n Simple_repeat Simple_repeat 1 56 0 7 1046 613 152 19 0 chr13 60442801 60442906 -59841406 + B1_Mur1 SINE Alu 42 148 -1 7 1046 658 306 31 28 chr13 60443642 60443931 -59840381 + B4A SINE B4 3 292 0 7 1046 536 294 7 0 chr13 60445019 60445165 -59839147 - RSINE1 SINE B4 -16 149 3 7 1046 1283 198 158 0 chr13 60445497 60445820 -59838492 + ORR1D1 LTR MaLR 1 374 0 7 1046 1505 262 71 61 chr13 60445846 60446499 -59837813 + Lx7 LINE L1 5942 6663 -1033 7 1046 456 266 94 21 chr13 60446500 60446692 -59837620 + Lx7 LINE L1 6983 7188 -508 7 1046 1978 180 34 90 chr13 60446963 60447439 -59836873 - RLTR18B LTR ERVK -63 449 1 7 1046 195 184 0 0 chr13 60447470 60447508 -59836804 + (TA)n Simple_repeat Simple_repeat 2 39 0 7 1046 312 295 38 51 chr13 60447709 60447866 -59836446 + L1MDb LINE L1 1030 1184 -5225 7 1046 215 189 0 19 chr13 60448623 60448677 -59835635 + GA-rich Low_complexity Low_complexity 1 53 0 7 1046 554 213 133 0 chr13 60449916 60450066 -59834246 - B3 SINE B2 0 216 47 7 1046 514 242 72 34 chr13 60450753 60450838 -59833474 + ID_B1 SINE B4 8 224 0 7 1046 614 163 32 8 chr13 60450838 60450962 -59833350 + B1_Mur1 SINE Alu 23 149 0 7 1046 297 296 57 68 chr13 60451027 60451219 -59833093 - Charlie7 DNA MER1_type -437 2175 1986 7 1046 269 355 58 0 chr13 60451274 60451395 -59832917 + MLT1H1 LTR MaLR 58 185 -370 7 1046 21 0 0 0 chr13 60452308 60452329 -59831983 + AT_rich Low_complexity Low_complexity 1 21 0 7 1046 338 267 101 47 chr13 60452501 60452670 -59831642 - L1MC4 LINE L1 -285 7757 7580 7 1046 1012 285 207 37 chr13 60452912 60453502 -59830810 + RMER1C Other Other 639 1328 -14 7 1046 1138 88 0 0 chr13 60453523 60453670 -59830642 - B1_Mus1 SINE Alu -1 147 1 7 1046 341 318 164 41 chr13 60454179 60454399 -59829913 + MER82 DNA MER2_type 291 537 -116 7 1046 549 187 0 0 chr13 60454508 60454615 -59829697 - RLTR12B LTR ERVK -396 132 26 7 1046 269 308 192 33 chr13 60454895 60455408 -59828904 + L1MEc LINE L1 1602 2185 -4215 7 1046 299 355 94 41 chr13 60455433 60455700 -59828612 - MER74B LTR ERVL -50 572 292 7 1046 338 260 0 13 chr13 60455700 60455778 -59828534 - RMER20B LTR ERVK -25 602 526 7 1046 857 210 169 9 chr13 60455790 60456021 -59828291 - RMER20B LTR ERVK -38 589 322 7 1046 488 340 72 21 chr13 60456021 60456352 -59827960 + L1MEc LINE L1 4874 5221 -1098 7 1046 212 200 14 0 chr13 60456420 60456490 -59827822 + CT-rich Low_complexity Low_complexity 2 72 0 7 1046 186 340 32 0 chr13 60456789 60456883 -59827429 - MIRb SINE MIR -74 194 98 7 1046 279 0 0 0 chr13 60458313 60458344 -59825968 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1046 189 74 0 0 chr13 60458887 60458914 -59825398 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1046 429 238 29 0 chr13 60459147 60459252 -59825060 + B3A SINE B2 11 118 -80 7 1046 297 0 0 0 chr13 60459362 60459395 -59824917 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1046 268 233 17 0 chr13 60459451 60459511 -59824801 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1046 549 0 0 0 chr13 60459651 60459712 -59824600 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1046 688 298 32 49 chr13 60460658 60460931 -59823381 + B4A SINE B4 7 276 -16 7 1046 204 40 0 0 chr13 60460934 60460959 -59823353 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1046 395 94 31 0 chr13 60460959 60461023 -59823289 + (TATG)n Simple_repeat Simple_repeat 3 68 0 7 1046 269 73 0 0 chr13 60461450 60461491 -59822821 - B1_Mm SINE Alu 0 147 107 7 1046 399 248 197 33 chr13 60461797 60462010 -59822302 + L1M3 LINE L1 5562 5809 -371 7 1046 3014 287 76 40 chr13 60461999 60463187 -59821125 - Lx8 LINE L1 -562 6911 5682 7 1046 413 116 0 14 chr13 60463198 60463268 -59821044 + (GGA)n Simple_repeat Simple_repeat 2 70 0 7 1046 449 283 35 0 chr13 60463270 60463415 -59820897 + L1M2 LINE L1 5455 5604 -696 7 1046 1427 70 27 0 chr13 60463422 60463608 -59820704 + B2_Mm2 SINE B2 5 195 0 7 1046 234 0 0 0 chr13 60464161 60464187 -59820125 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 1046 617 71 0 0 chr13 60464652 60464737 -59819575 + ORR1A2 LTR MaLR 242 326 -1 7 1046 180 0 0 0 chr13 60465499 60465519 -59818793 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 1046 399 68 0 0 chr13 60465585 60465644 -59818668 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 1046 318 224 0 0 chr13 60465782 60465867 -59818445 + (TG)n Simple_repeat Simple_repeat 2 86 0 7 1046 279 0 0 0 chr13 60466193 60466224 -59818088 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1046 250 298 8 24 chr13 60466697 60466914 -59817398 + (CCA)n Simple_repeat Simple_repeat 1 213 0 7 1046 360 111 0 0 chr13 60467794 60467848 -59816464 + (AGGGGG)n Simple_repeat Simple_repeat 3 56 0 7 1046 817 238 88 49 chr13 60468485 60468790 -59815522 + MTEa LTR MaLR 30 346 -33 7 1046 324 0 0 0 chr13 60469699 60469735 -59814577 + (TC)n Simple_repeat Simple_repeat 2 37 0 8 1046 276 100 0 0 chr13 60469747 60469787 -59814525 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1046 542 297 72 26 chr13 60469862 60470166 -59814146 - Charlie1 DNA MER1_type -19 2762 2445 8 1046 420 20 0 0 chr13 60472209 60472258 -59812054 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1046 282 198 293 14 chr13 60472969 60473069 -59811243 + B1F SINE Alu 1 117 -32 8 1046 369 0 0 0 chr13 60473411 60473452 -59810860 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 1046 282 70 0 0 chr13 60473452 60473489 -59810823 + (GA)n Simple_repeat Simple_repeat 1 37 0 8 1046 325 263 0 11 chr13 60473512 60473689 -59810623 + (TG)n Simple_repeat Simple_repeat 2 176 0 8 1046 862 199 118 0 chr13 60473968 60474154 -59810158 - B3 SINE B2 -7 209 2 8 1046 678 255 188 8 chr13 60475305 60475591 -59808721 - MTD LTR MaLR -15 364 60 8 1046 637 256 72 17 chr13 60475591 60475839 -59808473 + RLTR20D LTR ERVK 1 284 -284 8 1046 657 204 62 56 chr13 60475826 60475987 -59808325 + RLTR20D LTR ERVK 407 568 0 8 1046 2151 105 69 0 chr13 60476177 60476509 -59807803 + Lx2 LINE L1 6643 6997 0 8 1046 401 265 0 12 chr13 60477154 60477238 -59807074 + ID4_ SINE ID 1 83 0 8 1046 330 299 113 0 chr13 60477366 60477463 -59806849 + B1_Mur2 SINE Alu 1 108 -41 8 1046 387 0 0 0 chr13 60477482 60477525 -59806787 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 8 1046 273 81 16 31 chr13 60477716 60477780 -59806532 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 8 1046 429 260 188 22 chr13 60478708 60478889 -59805423 + ID_B1 SINE B4 7 217 -7 8 1046 182 150 25 0 chr13 60478919 60478959 -59805353 + (ATTG)n Simple_repeat Simple_repeat 2 42 0 8 1046 1267 34 0 0 chr13 60480150 60480297 -59804015 - B1_Mus2 SINE Alu 0 147 1 8 1046 226 246 46 0 chr13 60481835 60481900 -59802412 - Lx7 LINE L1 0 7696 7629 8 1046 447 19 0 0 chr13 60481910 60481962 -59802350 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 1046 983 235 57 87 chr13 60482007 60482584 -59801728 + RMER19B LTR ERVK 118 898 -4 8 1046 539 96 12 0 chr13 60482593 60482676 -59801636 + (CA)n Simple_repeat Simple_repeat 1 84 0 8 1046 1874 162 23 17 chr13 60482733 60483137 -59801175 + Lx4A LINE L1 6600 7058 0 8 1046 4003 214 51 29 chr13 60483163 60484067 -59800245 - Lx7 LINE L1 -333 7363 6440 8 1046 232 347 24 16 chr13 60484234 60484357 -59799955 - L1M5 LINE L1 -444 5729 5606 8 1046 405 136 0 0 chr13 60484650 60484716 -59799596 + (TCC)n Simple_repeat Simple_repeat 1 66 0 8 1046 216 350 10 10 chr13 60485106 60485207 -59799105 + CT-rich Low_complexity Low_complexity 2 102 0 8 1046 801 220 5 0 chr13 60485318 60485543 -59798769 + (CA)n Simple_repeat Simple_repeat 1 226 0 8 1046 262 220 140 21 chr13 60485659 60485752 -59798560 + L1M5 LINE L1 2375 2478 -3668 8 1046 303 28 0 0 chr13 60486760 60486796 -59797516 + (TA)n Simple_repeat Simple_repeat 2 37 0 8 1046 1166 56 7 0 chr13 60486933 60487076 -59797236 + B1_Mus1 SINE Alu 5 148 0 8 1046 451 77 64 0 chr13 60487085 60487163 -59797149 + (GAAAA)n Simple_repeat Simple_repeat 4 86 0 8 1046 605 142 0 8 chr13 60487509 60487637 -59796675 + (TCC)n Simple_repeat Simple_repeat 2 128 0 8 1046 802 243 72 53 chr13 60487847 60488151 -59796161 + RCHARR1 DNA MER1_type 626 935 -39 8 1046 465 268 102 21 chr13 60488154 60488341 -59795971 + B3 SINE B2 2 203 -13 8 1046 27 0 0 0 chr13 60488354 60488381 -59795931 + AT_rich Low_complexity Low_complexity 1 27 0 8 1046 724 61 0 10 chr13 60488401 60488501 -59795811 - ORR1A2 LTR MaLR -5 321 223 8 1046 9825 152 43 7 chr13 60488499 60490376 -59793936 - ORR1A2-int LTR MaLR -18 1945 1 8 1046 2009 135 28 16 chr13 60490376 60490699 -59793613 - ORR1A2 LTR MaLR 0 327 1 8 1046 840 98 45 0 chr13 60490705 60490837 -59793475 - L1_Mur2 LINE L1 -1204 4673 4536 8 1046 38805 39 2 3 chr13 60490836 60496742 -59787570 + L1Md_T LINE L1 76 6064 -521 8 1046 857 48 0 0 chr13 60496737 60496840 -59787472 + L1Md_T LINE L1 5954 6056 -526 8 1046 5460 33 0 0 chr13 60496840 60497469 -59786843 + L1Md_T LINE L1 5954 6582 0 8 1046 680 149 0 9 chr13 60497469 60497480 -59786832 + L1_Mus3 LINE L1 6051 6061 -577 8 1046 292 50 25 0 chr13 60497470 60497510 -59786802 - L1_Mur2 LINE L1 -1328 4549 4509 8 1046 2495 133 7 32 chr13 60497505 60497910 -59786402 + L1_Mur2 LINE L1 5257 5651 -226 8 1046 1001 162 113 0 chr13 60497906 60498091 -59786221 + Lx4A LINE L1 6852 7057 -1 8 1046 265 260 49 56 chr13 60499040 60499195 -59785117 - RLTR43A LTR ERVK 0 364 240 8 1046 577 312 52 0 chr13 60499380 60499572 -59784740 + MT2B LTR ERVL 338 539 -62 8 1046 3036 28 3 62 chr13 60499572 60499960 -59784352 + RLTR10B2 LTR ERVK 1 365 0 8 1046 242 115 24 0 chr13 60500041 60500092 -59784220 + MT2B2 LTR ERVL 543 599 -2 1 1046 252 346 12 0 chr13 60500149 60500230 -59784082 + ID4_ SINE ID 2 83 0 2 1046 426 319 54 30 chr13 60500962 60501130 -59783182 + ID_B1 SINE B4 2 173 -51 3 1046 405 0 0 0 chr13 60501137 60501182 -59783130 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1046 225 0 0 0 chr13 60501604 60501629 -59782683 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1046 294 283 11 21 chr13 60502257 60502351 -59781961 + L1MB7 LINE L1 5850 5942 -242 6 1046 1027 194 20 5 chr13 60503036 60503238 -59781074 - B3 SINE B2 -11 205 1 7 1046 1728 247 24 98 chr13 60503601 60503639 -59780673 - RMER19B LTR ERVK -1 610 590 8 1046 5021 48 8 2 chr13 60503639 60504248 -59780064 - L1Md_F2 LINE L1 -15 6567 5955 9 1046 1913 167 58 52 chr13 60504248 60504739 -59779573 - RMER19B LTR ERVK -246 656 138 8 1046 513 225 126 19 chr13 60505647 60505797 -59778515 + B3 SINE B2 5 162 -33 1 1046 351 0 0 0 chr13 60505797 60505836 -59778476 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1046 469 240 60 60 chr13 60505836 60505867 -59778445 + B2_Mm2 SINE B2 163 186 -9 1 1046 247 65 21 21 chr13 60505966 60506013 -59778299 + (TTTG)n Simple_repeat Simple_repeat 4 50 0 1 1046 1002 80 17 17 chr13 60506014 60506193 -59778119 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1046 194 257 26 39 chr13 60507240 60507317 -59776995 - MIR SINE MIR -124 138 63 1 1046 2274 198 57 9 chr13 60508131 60508570 -59775742 + Lx5 LINE L1 6541 7000 -50 1 1046 412 280 211 5 chr13 60508735 60508944 -59775368 + MER2 DNA MER2_type 93 344 -1 1 1046 1934 163 77 17 chr13 60510271 60510633 -59773679 + ORR1B1 LTR MaLR 3 386 -8 1 1046 206 148 0 53 chr13 60510954 60511011 -59773301 + T-rich Low_complexity Low_complexity 1 54 0 1 1046 219 158 26 0 chr13 60511348 60511386 -59772926 + GA-rich Low_complexity Low_complexity 4 42 0 1 1046 450 0 0 0 chr13 60511425 60511475 -59772837 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1046 189 0 0 0 chr13 60511521 60511542 -59772770 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1046 543 278 94 58 chr13 60512025 60512216 -59772096 + B3A SINE B2 1 198 0 2 1046 258 241 47 24 chr13 60512315 60512400 -59771912 + MIR3 SINE MIR 81 167 -41 2 1046 879 250 89 22 chr13 60513240 60513555 -59770757 - L1MA8 LINE L1 -30 6261 5926 2 1046 1062 253 70 0 chr13 60513588 60513843 -59770469 - ORR1D2 LTR MaLR 0 370 98 2 1046 2118 101 30 28 chr13 60513843 60514243 -59770069 - ORR1A2 LTR MaLR 0 394 7 2 1046 435 281 10 0 chr13 60514223 60514319 -59769993 - ORR1D2 LTR MaLR -268 102 6 2 1046 363 278 120 11 chr13 60514319 60514539 -59769773 - L1MA8 LINE L1 -420 5892 5647 2 1046 461 58 14 0 chr13 60515284 60515353 -59768959 + (CA)n Simple_repeat Simple_repeat 2 71 0 2 1046 192 125 0 0 chr13 60515538 60515570 -59768742 + (GAA)n Simple_repeat Simple_repeat 1 32 0 2 1046 1160 49 0 0 chr13 60515681 60515823 -59768489 + L1_Mus1 LINE L1 6424 6565 -2 3 1046 420 277 0 24 chr13 60515857 60515942 -59768370 + B3 SINE B2 51 133 -83 3 1046 337 228 29 0 chr13 60516369 60516450 -59767862 - ID4 SINE ID -60 92 10 3 1046 740 277 31 5 chr13 60516646 60516838 -59767474 - B3A SINE B2 -1 197 1 3 1046 272 318 36 50 chr13 60516982 60517121 -59767191 + MLT1N2 LTR MaLR 79 215 -347 3 1046 314 315 22 0 chr13 60517383 60517472 -59766840 + MLT1I LTR MaLR 87 177 -234 3 1046 295 161 71 0 chr13 60517630 60517686 -59766626 - MER58A DNA MER1_type -138 86 27 3 1046 874 224 83 0 chr13 60517826 60518018 -59766294 - B3 SINE B2 -7 209 2 3 1046 190 228 123 0 chr13 60518692 60518749 -59765563 + L2 LINE L2 547 610 -2809 3 1046 347 384 0 7 chr13 60519301 60519453 -59764859 + MER58B DNA MER1_type 174 324 -17 3 1046 309 241 27 27 chr13 60519611 60519722 -59764590 + (TG)n Simple_repeat Simple_repeat 2 112 0 4 1046 1089 102 0 20 chr13 60519780 60519930 -59764382 + B1_Mus1 SINE Alu 2 148 0 4 1046 226 0 29 29 chr13 60519936 60519971 -59764341 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1046 255 333 113 10 chr13 60520565 60520662 -59763650 - MIRc SINE MIR -85 183 77 4 1046 498 276 82 56 chr13 60521104 60521300 -59763012 - B4A SINE B4 -91 201 1 4 1046 561 299 86 15 chr13 60521322 60521505 -59762807 - B3A SINE B2 -7 188 1 4 1046 2210 83 10 163 chr13 60522976 60523362 -59760950 + ORR1A2 LTR MaLR 1 327 0 4 1046 227 290 0 10 chr13 60523410 60523511 -59760801 + GA-rich Low_complexity Low_complexity 2 101 0 4 1046 235 254 17 0 chr13 60524909 60524968 -59759344 + L1MB2 LINE L1 5544 5603 -580 4 1046 1789 132 18 0 chr13 60524989 60525270 -59759042 + Lx2 LINE L1 6709 6994 -3 4 1046 682 294 80 10 chr13 60525303 60525592 -59758720 + L1MB2 LINE L1 5616 5924 -247 4 1046 1016 230 179 23 chr13 60525679 60526031 -59758281 - MTD LTR MaLR 0 419 13 5 1046 197 108 0 26 chr13 60526061 60526099 -59758213 + (TAA)n Simple_repeat Simple_repeat 1 37 0 5 1046 26 30 0 0 chr13 60526327 60526360 -59757952 + AT_rich Low_complexity Low_complexity 1 33 0 5 1046 369 277 146 29 chr13 60527209 60527380 -59756932 - ORR1E LTR MaLR -168 191 1 5 1046 297 217 0 0 chr13 60527713 60527773 -59756539 + L1MB8 LINE L1 6113 6172 -6 5 1046 1453 140 110 129 chr13 60528328 60528746 -59755566 - RMER17C LTR ERVK 0 410 1 5 1046 282 56 0 0 chr13 60528787 60528823 -59755489 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1046 703 202 3 8 chr13 60529970 60530339 -59753973 + CT-rich Low_complexity Low_complexity 1 366 0 5 1046 255 203 126 52 chr13 60530464 60530599 -59753713 - Lx8 LINE L1 -2 7471 7327 5 1046 894 231 13 116 chr13 60530612 60530837 -59753475 - B3 SINE B2 -6 210 9 5 1046 894 280 155 3 chr13 60530852 60531142 -59753170 - Lx8 LINE L1 -141 7332 6999 5 1046 340 352 75 58 chr13 60531494 60531802 -59752510 - MLT1A0 LTR MaLR -18 347 35 6 1046 181 211 26 0 chr13 60532685 60532723 -59751589 + L3 LINE CR1 4051 4089 -400 6 1046 357 186 110 30 chr13 60533427 60533527 -59750785 + MLT1D LTR MaLR 398 505 0 6 1046 3234 53 18 10 chr13 60533825 60534222 -59750090 + MTB LTR MaLR 1 400 0 6 1046 891 227 34 19 chr13 60534492 60534699 -59749613 + B3 SINE B2 7 216 0 6 1046 34 0 0 0 chr13 60534856 60534890 -59749422 + AT_rich Low_complexity Low_complexity 1 34 0 6 1046 248 212 0 15 chr13 60534971 60535038 -59749274 + (TATG)n Simple_repeat Simple_repeat 2 67 0 6 1046 204 40 0 0 chr13 60538336 60538361 -59745951 + (TTG)n Simple_repeat Simple_repeat 3 27 0 6 1046 979 69 45 30 chr13 60538385 60538519 -59745793 - B1_Mm SINE Alu -11 136 1 6 1046 1149 205 10 14 chr13 60538731 60538939 -59745373 + B3 SINE B2 1 207 -9 6 1046 22 0 0 0 chr13 60539100 60539122 -59745190 + GC_rich Low_complexity Low_complexity 1 22 0 7 1046 362 185 88 65 chr13 60539962 60540343 -59743969 + (AGTAG)n Simple_repeat Simple_repeat 1 390 0 7 1046 860 219 66 0 chr13 60540452 60540648 -59743664 - B3 SINE B2 -3 213 5 7 1046 333 193 517 8 chr13 60541313 60541433 -59742879 + B2_Mm2 SINE B2 1 181 -14 7 1046 701 222 26 72 chr13 60542335 60542515 -59741797 + B3A SINE B2 13 180 -18 7 1046 180 77 0 0 chr13 60542515 60542541 -59741771 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1046 701 221 28 67 chr13 60542541 60542558 -59741754 + B3A SINE B2 181 197 -1 7 1046 372 212 0 0 chr13 60542572 60542638 -59741674 - Lx5 LINE L1 -683 6367 6302 7 1046 279 316 22 15 chr13 60543562 60543697 -59740615 + L1MB8 LINE L1 5879 6014 -164 7 1046 808 199 35 0 chr13 60544852 60544993 -59739319 + B1_Mur1 SINE Alu 3 148 -1 7 1046 1142 118 5 0 chr13 60544993 60545205 -59739107 + (GAA)n Simple_repeat Simple_repeat 1 212 0 7 1046 519 294 106 34 chr13 60545325 60545712 -59738600 + L1ME2 LINE L1 5399 5813 -631 8 1046 909 226 10 35 chr13 60545723 60545899 -59738413 + B3A SINE B2 3 177 -21 8 1046 459 0 0 0 chr13 60545899 60545950 -59738362 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1046 909 226 10 35 chr13 60545950 60545970 -59738342 + B3A SINE B2 178 194 -4 8 1046 324 319 163 55 chr13 60545970 60546259 -59738053 + L1ME2 LINE L1 5826 6145 -19 8 1046 544 227 114 0 chr13 60546975 60547107 -59737205 + B3 SINE B2 60 206 -10 8 1046 216 0 0 0 chr13 60547852 60547876 -59736436 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1046 216 330 75 0 chr13 60549478 60549572 -59734740 + MIRc SINE MIR 28 128 -140 8 1046 711 273 67 0 chr13 60549580 60549745 -59734567 + B3A SINE B2 5 180 -18 8 1046 1310 85 11 0 chr13 60549896 60550072 -59734240 + B2_Mm1a SINE B2 2 179 -14 8 1046 261 0 0 0 chr13 60550087 60550116 -59734196 + (GA)n Simple_repeat Simple_repeat 2 30 0 8 1046 239 79 26 0 chr13 60550644 60550682 -59733630 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 1046 300 291 106 26 chr13 60551048 60551161 -59733151 - MLT1A1 LTR MaLR -12 396 275 9 1046 260 172 224 0 chr13 60551246 60551304 -59733008 - MLT1A1 LTR MaLR -258 116 46 9 1046 234 256 106 35 chr13 60552582 60552667 -59731645 + MIR SINE MIR 58 148 -60 9 1046 180 0 0 0 chr13 60552801 60552821 -59731491 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 9 1046 900 140 0 0 chr13 60552821 60552957 -59731355 - B1_Mur4 SINE Alu -13 137 2 9 1046 248 305 84 19 chr13 60552968 60553075 -59731237 - Charlie1a DNA MER1_type -15 1440 1327 9 1046 222 191 0 0 chr13 60553421 60553468 -59730844 + (CAA)n Simple_repeat Simple_repeat 2 48 0 9 1046 1058 244 9 9 chr13 60553708 60553923 -59730389 - B3 SINE B2 -1 215 1 9 1046 349 276 35 7 chr13 60553951 60554026 -59730286 + L1MB7 LINE L1 4618 4697 -1449 9 1046 248 0 31 0 chr13 60554026 60554058 -59730254 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 9 1046 349 276 35 7 chr13 60554058 60554124 -59730188 + L1MB7 LINE L1 4698 4762 -1384 9 1046 766 246 13 66 chr13 60554124 60554350 -59729962 + B3 SINE B2 3 216 0 9 1046 252 234 7 52 chr13 60554538 60554575 -59729737 + A-rich Low_complexity Low_complexity 3 37 0 1 1046 823 140 93 22 chr13 60554575 60554714 -59729598 + B1_Mur3 SINE Alu 1 149 0 1 1046 252 234 7 52 chr13 60554714 60554779 -59729533 + A-rich Low_complexity Low_complexity 38 100 0 1 1046 183 42 0 0 chr13 60554779 60554803 -59729509 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1046 252 234 7 52 chr13 60554803 60554834 -59729478 + A-rich Low_complexity Low_complexity 101 130 0 1 1046 489 262 235 0 chr13 60554860 60555043 -59729269 + L1MB7 LINE L1 5089 5314 -832 9 1046 763 199 21 0 chr13 60555100 60555241 -59729071 - B1_Mur1 SINE Alu -2 147 4 1 130 608 274 134 32 chr13 60555254 60555694 -59728618 + L1MB7 LINE L1 5320 5852 -326 9 1047 351 252 180 0 chr13 60555751 60555890 -59728422 + L1MB7 LINE L1 5963 6126 -58 9 1047 185 105 0 136 chr13 60556490 60556534 -59727778 + L3b LINE CR1 183 220 -262 1 1047 234 0 0 0 chr13 60557559 60557585 -59726727 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1047 364 328 78 40 chr13 60558985 60559240 -59725072 + MLT1G3 LTR MaLR 7 240 -351 1 1047 231 419 31 0 chr13 60559320 60559449 -59724863 + MLT1G3 LTR MaLR 457 589 -2 1 1047 539 299 48 0 chr13 60559454 60559601 -59724711 + RSINE1 SINE B4 7 160 -5 1 1047 315 0 0 0 chr13 60559811 60559846 -59724466 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 1047 203 319 73 21 chr13 60560270 60560366 -59723946 - MIRb SINE MIR -167 101 1 1 1047 234 283 0 62 chr13 60560411 60560475 -59723837 - MLT1I LTR MaLR -2 409 350 1 1047 238 244 31 72 chr13 60560660 60560757 -59723555 - MLT1I LTR MaLR -284 127 35 1 1047 27 29 0 0 chr13 60561380 60561414 -59722898 + AT_rich Low_complexity Low_complexity 1 34 0 1 1047 283 300 48 40 chr13 60561468 60561593 -59722719 - MLT1A LTR MaLR -34 340 215 1 1047 818 252 142 32 chr13 60562191 60562437 -59721875 + B4A SINE B4 2 274 -18 1 1047 249 221 0 0 chr13 60562522 60562590 -59721722 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1047 283 336 33 0 chr13 60562857 60562979 -59721333 + L2a LINE L2 3298 3423 -3 1 1047 3610 13 2 0 chr13 60563089 60563484 -59720828 - MTA_Mm LTR MaLR 0 396 1 1 1047 9585 29 0 0 chr13 60563484 60564582 -59719730 - MTA_Mm-int LTR MaLR 0 1098 1 1 1047 3597 15 2 0 chr13 60564582 60564977 -59719335 - MTA_Mm LTR MaLR 0 396 1 1 1047 782 245 125 0 chr13 60565026 60565218 -59719094 + B3 SINE B2 1 216 0 1 1047 343 202 71 50 chr13 60565330 60565429 -59718883 + MLT1D LTR MaLR 36 136 -369 1 1047 287 314 41 105 chr13 60565514 60565685 -59718627 + MLT1D LTR MaLR 303 462 -5 1 1047 2151 61 88 63 chr13 60565951 60566268 -59718044 + ORR1A2 LTR MaLR 1 325 -2 1 1047 290 316 81 65 chr13 60567254 60567440 -59716872 - MLT2D LTR ERVL -16 398 210 1 1047 636 246 158 51 chr13 60567670 60567855 -59716457 - B4 SINE B4 -9 283 82 1 1047 243 0 0 0 chr13 60567855 60567882 -59716430 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1047 636 246 158 51 chr13 60567882 60567949 -59716363 - B4 SINE B4 -211 81 5 1 1047 216 0 0 0 chr13 60569037 60569061 -59715251 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1047 849 250 42 0 chr13 60569066 60569258 -59715054 + B3 SINE B2 8 207 -9 1 1047 245 27 54 0 chr13 60569459 60569496 -59714816 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1047 414 94 0 0 chr13 60569566 60569630 -59714682 + (TTCA)n Simple_repeat Simple_repeat 3 66 0 1 1047 809 136 0 60 chr13 60570020 60570169 -59714143 + URR1B DNA MER1_type 83 222 -3 1 1047 303 28 0 0 chr13 60570253 60570289 -59714023 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 1047 1754 330 87 19 chr13 60570316 60571122 -59713190 - Lx8 LINE L1 -2 7471 6611 1 1047 901 238 29 19 chr13 60571125 60571335 -59712977 - B3 SINE B2 0 216 5 1 1047 2276 107 0 3 chr13 60571388 60571707 -59712605 + ORR1A3 LTR MaLR 1 318 -8 1 1047 363 280 16 25 chr13 60571737 60571858 -59712454 - L1_Mur1 LINE L1 -1510 4376 4257 1 1047 1307 270 74 6 chr13 60573134 60573484 -59710828 + MTE2b LTR MaLR 6 379 0 1 1047 2214 179 63 27 chr13 60573635 60574111 -59710201 - RLTR20B3 LTR ERVK 0 578 72 1 1047 297 346 58 57 chr13 60574234 60574452 -59709860 + MLT1G3 LTR MaLR 189 418 -161 1 1047 232 87 174 0 chr13 60575745 60575814 -59708498 + (CATGC)n Simple_repeat Simple_repeat 2 82 0 1 1047 817 259 50 28 chr13 60576266 60576548 -59707764 - B4A SINE B4 -2 290 3 1 1047 386 315 45 102 chr13 60576757 60577001 -59707311 + LTR81A LTR ERV1? 22 251 -1099 1 1047 868 270 91 80 chr13 60577097 60577472 -59706840 + MTE2a LTR MaLR 1 379 0 1 1047 401 235 40 99 chr13 60578017 60578168 -59706144 - RMER15 LTR ERVL -96 479 338 1 1047 256 277 0 73 chr13 60578357 60578435 -59705877 + MTEa LTR MaLR 1 71 -308 1 1047 417 264 37 92 chr13 60578461 60578624 -59705688 + MTEa LTR MaLR 172 325 -54 1 1047 440 242 20 0 chr13 60578918 60579017 -59705295 - Tigger7 DNA MER2_type -28 2463 2363 1 1047 284 325 55 24 chr13 60579210 60579374 -59704938 - L1MA8 LINE L1 -22 6269 6101 1 1047 732 282 36 0 chr13 60579975 60580170 -59704142 - B3 SINE B2 -14 202 1 1 1047 258 81 0 0 chr13 60581030 60581067 -59703245 + (GGGTG)n Simple_repeat Simple_repeat 1 37 0 1 1047 234 0 0 0 chr13 60581400 60581426 -59702886 + (CCCCCA)n Simple_repeat Simple_repeat 4 29 0 1 1047 978 41 0 0 chr13 60582875 60582997 -59701315 - B1_Mm SINE Alu -1 146 25 1 1047 215 328 87 29 chr13 60582920 60583058 -59701254 + ID_B1 SINE B4 12 157 -67 1 1047 211 250 151 14 chr13 60583062 60583135 -59701177 + B3 SINE B2 68 150 -66 1 1047 389 20 20 0 chr13 60583137 60583187 -59701125 + (TC)n Simple_repeat Simple_repeat 1 51 0 1 1047 225 0 0 0 chr13 60583278 60583303 -59701009 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1047 29 28 0 0 chr13 60583355 60583391 -59700921 + AT_rich Low_complexity Low_complexity 1 36 0 1 1047 688 206 152 31 chr13 60583397 60583588 -59700724 + B3 SINE B2 2 215 -1 1 1047 307 229 87 77 chr13 60583627 60583731 -59700581 - MTD LTR MaLR -1 418 314 1 1047 418 195 232 13 chr13 60584712 60584863 -59699449 + B3A SINE B2 1 184 -11 1 1047 3492 57 7 4 chr13 60584866 60585322 -59698990 - MusHAL1 LINE L1 -8 2704 2248 1 1047 853 298 35 28 chr13 60585835 60586122 -59698190 + B4A SINE B4 2 290 -2 1 1047 409 289 128 41 chr13 60586639 60586834 -59697478 - MER34A1 LTR ERV1 -367 220 9 1 1047 815 99 63 0 chr13 60587988 60588130 -59696182 + Lx LINE L1 6492 6642 -12 1 1047 441 0 0 0 chr13 60588212 60588261 -59696051 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1047 485 248 145 7 chr13 60588373 60588511 -59695801 - B3A SINE B2 -27 171 15 1 1047 390 259 12 0 chr13 60588515 60588600 -59695712 - B4A SINE B4 -65 227 142 1 1047 696 253 160 27 chr13 60588952 60589215 -59695097 + MTE2b LTR MaLR 1 298 -81 1 1047 200 206 0 0 chr13 60590312 60590346 -59693966 + polypurine Low_complexity Low_complexity 3 36 0 1 1047 226 264 155 77 chr13 60591090 60591126 -59693186 - MTE-int LTR MaLR -1327 253 178 1 1047 284 286 154 0 chr13 60591126 60591217 -59693095 - B4 SINE B4 -132 160 56 1 1047 226 264 155 77 chr13 60591217 60591271 -59693041 - MTE-int LTR MaLR -1327 177 59 1 1047 442 278 28 9 chr13 60591336 60591445 -59692867 - B3A SINE B2 -86 112 2 1 1047 711 332 97 71 chr13 60591624 60592046 -59692266 + MLT-int LTR MaLR 1303 1735 0 1 1047 516 282 114 93 chr13 60592182 60592506 -59691806 - ORR1E LTR MaLR -4 355 25 1 1047 371 255 66 34 chr13 60593651 60593789 -59690523 - B3A SINE B2 -43 152 1 1 1047 382 316 82 27 chr13 60593793 60594122 -59690190 - L1_Mur3 LINE L1 -3464 2416 2070 1 1047 1371 85 11 5 chr13 60594240 60594430 -59689882 - B2_Mm2 SINE B2 -4 191 1 1 1047 23 0 0 0 chr13 60594903 60594926 -59689386 + AT_rich Low_complexity Low_complexity 1 23 0 1 1047 5182 42 10 0 chr13 60595642 60596263 -59688049 - L1Md_F3 LINE L1 -14 6570 5944 1 1047 10159 49 3 1 chr13 60596264 60597499 -59686813 + L1Md_F3 LINE L1 4349 5586 -297 1 1047 8212 39 16 0 chr13 60597499 60598481 -59685831 + L1Md_F3 LINE L1 5587 6584 0 1 1047 185 94 0 30 chr13 60598647 60598680 -59685632 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1 1047 340 342 17 17 chr13 60598691 60598807 -59685505 - RSINE1 SINE B4 -48 117 2 1 1047 889 233 162 30 chr13 60599557 60599823 -59684489 - MTD LTR MaLR -118 301 1 1 1047 3901 213 78 33 chr13 60599842 60600398 -59683914 + Lx7 LINE L1 5531 6108 -1588 1 1047 2609 129 0 22 chr13 60600398 60600801 -59683511 - ORR1B1 LTR MaLR 0 394 1 1 1047 3901 230 55 58 chr13 60600801 60601393 -59682919 + Lx7 LINE L1 6109 6682 -1014 1 1047 475 250 0 27 chr13 60601400 60601511 -59682801 - B3A SINE B2 -58 140 33 1 1047 4766 269 99 22 chr13 60601522 60602688 -59681624 - Lx6 LINE L1 -27 7433 6132 1 1047 288 0 0 0 chr13 60602688 60602720 -59681592 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1047 4766 219 42 11 chr13 60602720 60603363 -59680949 - Lx6 LINE L1 -1329 6131 5488 1 1047 316 288 90 0 chr13 60604024 60604135 -59680177 - B4 SINE B4 -169 123 3 1 1047 288 371 0 6 chr13 60604143 60604303 -59680009 + (TCCA)n Simple_repeat Simple_repeat 3 161 0 1 1047 1657 212 35 45 chr13 60604868 60605244 -59679068 - ORR1D1 LTR MaLR 0 374 3 1 1047 604 114 35 29 chr13 60605961 60606133 -59678179 + (TCTA)n Simple_repeat Simple_repeat 4 176 0 1 1047 774 167 0 0 chr13 60606165 60606345 -59677967 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 1047 598 236 0 0 chr13 60606376 60606486 -59677826 - RSINE1 SINE B4 -53 112 3 1 1047 328 227 8 141 chr13 60606808 60606970 -59677342 + L1MA4A LINE L1 5699 5842 -461 1 1047 229 235 0 0 chr13 60606969 60607020 -59677292 + Lx8 LINE L1 7421 7471 -2 1 1047 23 0 0 0 chr13 60607091 60607114 -59677198 + AT_rich Low_complexity Low_complexity 1 23 0 1 1047 300 146 0 0 chr13 60607669 60607717 -59676595 - U2 snRNA snRNA -140 48 1 1 1047 902 37 0 0 chr13 60607878 60607986 -59676326 + B1_Mus1 SINE Alu 34 141 -7 1 1047 512 227 21 0 chr13 60608036 60608133 -59676179 + B3A SINE B2 4 102 -96 1 1047 5110 113 7 13 chr13 60608209 60608965 -59675347 - Lx2 LINE L1 0 6997 6247 1 1047 201 74 0 0 chr13 60609955 60609982 -59674330 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1047 292 347 77 56 chr13 60610379 60610601 -59673711 + MIRb SINE MIR 2 220 -48 1 1047 189 74 0 0 chr13 60610712 60610739 -59673573 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1047 321 26 0 0 chr13 60610841 60610879 -59673433 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1047 425 294 67 52 chr13 60610879 60611073 -59673239 - MER2 DNA MER2_type -32 313 117 2 1047 640 250 45 25 chr13 60611242 60611443 -59672869 - B3 SINE B2 -11 205 1 2 1047 1247 139 46 14 chr13 60611508 60611726 -59672586 + URR1B DNA MER1_type 1 225 0 2 1047 26 30 0 0 chr13 60611780 60611813 -59672499 + AT_rich Low_complexity Low_complexity 1 33 0 2 1047 372 269 25 8 chr13 60612616 60612736 -59671576 - MLT1G3 LTR MaLR -229 366 245 2 1047 1857 107 38 8 chr13 60613405 60613670 -59670642 + Lx LINE L1 6055 6327 -327 2 1047 906 121 0 13 chr13 60613664 60613823 -59670489 + Lx LINE L1 6485 6641 -13 2 1047 267 31 0 0 chr13 60613823 60613855 -59670457 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2 1047 306 255 35 62 chr13 60613879 60614051 -59670261 - ID_B1 SINE B4 -4 220 14 2 1047 333 338 145 24 chr13 60615042 60615339 -59668973 - L2a LINE L2 -5 3421 3089 2 1047 603 272 149 45 chr13 60615791 60616099 -59668213 - MTD LTR MaLR -16 403 64 2 1047 783 218 80 40 chr13 60616517 60616718 -59667594 - B3 SINE B2 -6 210 2 2 1047 324 73 36 18 chr13 60616754 60616810 -59667502 - L1_Mus2 LINE L1 -13 6553 6497 2 1047 3185 57 0 15 chr13 60617331 60617741 -59666571 + L1Md_F2 LINE L1 6179 6582 0 2 1047 414 0 0 0 chr13 60617880 60617926 -59666386 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1047 357 330 0 0 chr13 60618919 60619028 -59665284 - PB1D10 SINE Alu -5 112 4 2 1047 306 0 0 0 chr13 60619677 60619711 -59664601 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1047 423 174 50 0 chr13 60619763 60619884 -59664428 + (TATG)n Simple_repeat Simple_repeat 1 127 0 2 1047 270 211 0 0 chr13 60619884 60619936 -59664376 - ID4_ SINE ID -25 58 7 2 1047 2240 139 122 5 chr13 60620083 60620460 -59663852 - MTC LTR MaLR 0 421 1 2 1047 232 172 35 0 chr13 60621688 60621746 -59662566 + CT-rich Low_complexity Low_complexity 4 63 0 2 1047 489 149 169 69 chr13 60621847 60621977 -59662335 + B1_Mur2 SINE Alu 2 144 -5 2 1047 369 0 0 0 chr13 60622033 60622074 -59662238 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1047 882 175 7 0 chr13 60622219 60622362 -59661950 + B1_Mur2 SINE Alu 1 144 -5 2 1047 951 202 29 5 chr13 60622711 60622915 -59661397 + B3 SINE B2 2 210 -6 2 1047 1089 204 14 14 chr13 60623573 60623787 -59660525 - B3 SINE B2 0 216 3 2 1047 839 302 112 23 chr13 60623833 60624307 -59660005 + MER89 LTR ERV1 1 516 -43 2 1047 245 350 21 0 chr13 60624323 60624420 -59659892 + MER5A DNA MER1_type 17 115 -74 2 1047 716 207 7 14 chr13 60624996 60625138 -59659174 + B1_Mur2 SINE Alu 2 142 -7 2 1047 435 112 0 0 chr13 60625140 60625220 -59659092 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1047 241 278 79 0 chr13 60625706 60625832 -59658480 - Arthur1 DNA Tip100 -347 3600 3465 2 1047 5428 162 22 43 chr13 60625906 60626524 -59657788 + Lx7 LINE L1 4851 5472 -408 2 1047 1938 86 76 120 chr13 60626524 60626808 -59657504 + ORR1A2 LTR MaLR 1 270 -57 2 1047 1198 62 0 0 chr13 60626808 60626952 -59657360 + B1_Mus2 SINE Alu 4 147 0 2 1047 1938 86 76 120 chr13 60626952 60627009 -59657303 + ORR1A2 LTR MaLR 271 327 0 2 1047 5428 178 20 56 chr13 60627009 60627687 -59656625 + Lx7 LINE L1 5473 6116 -1580 2 1047 369 270 85 12 chr13 60627902 60628067 -59656245 + RMER20B LTR ERVK 180 356 -271 2 1047 1580 166 77 10 chr13 60628229 60628528 -59655784 + Lx7 LINE L1 6132 6450 -1246 2 1047 2946 166 4 68 chr13 60628825 60629386 -59654926 + Lx6 LINE L1 6434 6958 -502 2 1047 1319 187 33 69 chr13 60629403 60629726 -59654586 + Lx7 LINE L1 7375 7685 -11 2 1047 333 0 0 0 chr13 60629726 60629763 -59654549 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1047 750 93 0 0 chr13 60630664 60630772 -59653540 + (CA)n Simple_repeat Simple_repeat 2 109 0 2 1047 2381 139 13 0 chr13 60631739 60632135 -59652177 + MTC LTR MaLR 1 401 -20 2 1047 895 205 37 5 chr13 60632159 60632350 -59651962 - B3 SINE B2 -19 197 1 2 1047 997 246 31 12 chr13 60632597 60632856 -59651456 + B4A SINE B4 3 266 -26 2 1047 543 90 0 0 chr13 60632861 60632939 -59651373 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1047 555 256 0 0 chr13 60633003 60633136 -59651176 + ID_B1 SINE B4 86 218 -6 2 1047 264 178 41 0 chr13 60633139 60633212 -59651100 + GA-rich Low_complexity Low_complexity 2 77 0 2 1047 521 268 31 44 chr13 60633215 60633375 -59650937 + RSINE1 SINE B4 8 165 0 2 1047 716 260 28 0 chr13 60633975 60634152 -59650160 - B3A SINE B2 -16 182 1 2 1047 2232 73 19 3 chr13 60634493 60634810 -59649502 - ORR1A2 LTR MaLR 0 327 6 2 1047 314 355 9 9 chr13 60634853 60634964 -59649348 - B4A SINE B4 -163 129 19 2 1047 282 106 0 0 chr13 60634972 60635019 -59649293 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1047 369 0 0 0 chr13 60635019 60635059 -59649253 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1047 279 206 199 37 chr13 60635640 60635776 -59648536 - L1MB7 LINE L1 -51 6133 5976 2 1047 319 312 55 48 chr13 60635846 60635991 -59648321 - RSINE1 SINE B4 -15 150 5 2 1047 551 291 19 26 chr13 60636623 60636778 -59647534 + ID_B1 SINE B4 66 219 -5 2 1047 21 0 0 0 chr13 60636812 60636833 -59647479 + AT_rich Low_complexity Low_complexity 1 21 0 2 1047 182 278 0 89 chr13 60636901 60636980 -59647332 - MIR3 SINE MIR -29 179 108 2 1047 321 276 10 0 chr13 60636987 60637085 -59647227 + MER5A1 DNA MER1_type 4 102 -64 2 1047 483 250 262 0 chr13 60637291 60637517 -59646795 - B4A SINE B4 -2 290 6 2 1047 321 267 65 28 chr13 60637893 60638001 -59646311 - PB1D10 SINE Alu 0 117 6 2 1047 225 271 17 0 chr13 60638067 60638126 -59646186 - B1F SINE Alu -89 60 1 2 1047 254 287 127 37 chr13 60638223 60638357 -59645955 - LTR31 LTR ERV1 -60 559 414 2 1047 1094 174 44 10 chr13 60638992 60639195 -59645117 - B3 SINE B2 -6 210 1 2 1047 593 219 33 33 chr13 60639525 60639676 -59644636 - B3A SINE B2 -41 157 7 2 1047 642 122 75 0 chr13 60640160 60640267 -59644045 + B1_Mur1 SINE Alu 24 138 -11 2 1047 498 17 0 0 chr13 60640267 60640326 -59643986 + (CATA)n Simple_repeat Simple_repeat 2 60 0 2 1047 353 304 26 9 chr13 60640626 60640742 -59643570 + CT-rich Low_complexity Low_complexity 2 119 0 2 1047 635 257 221 51 chr13 60641003 60641167 -59643145 - ORR1D2 LTR MaLR 0 370 167 2 1047 543 31 0 0 chr13 60641167 60641232 -59643080 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 2 1047 635 257 221 51 chr13 60641232 60641383 -59642929 - ORR1D2 LTR MaLR -204 166 2 2 1047 5016 172 79 39 chr13 60641629 60642547 -59641765 + RMER12 LTR ERVK 1 957 -365 2 1047 282 116 0 0 chr13 60642547 60642590 -59641722 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1047 5016 172 79 39 chr13 60642590 60642842 -59641470 + RMER12 LTR ERVK 958 1217 -105 2 1047 512 206 0 11 chr13 60642980 60643162 -59641150 + CT-rich Low_complexity Low_complexity 1 180 0 2 1047 321 325 0 0 chr13 60643240 60643320 -59640992 - RSINE1 SINE B4 -29 136 57 2 1047 325 242 0 0 chr13 60644227 60644293 -59640019 + PB1D10 SINE Alu 39 104 -13 2 1047 189 0 0 0 chr13 60644293 60644314 -59639998 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 1047 578 237 34 0 chr13 60644315 60644433 -59639879 + RSINE1 SINE B4 3 124 -41 2 1047 189 74 0 0 chr13 60644435 60644462 -59639850 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1047 301 362 61 94 chr13 60644999 60645337 -59638975 - L2 LINE L2 -2030 1389 1070 2 1047 731 260 15 30 chr13 60645337 60645535 -59638777 + B3A SINE B2 3 197 -1 2 1047 301 362 61 94 chr13 60645535 60645739 -59638573 - L2 LINE L2 -2350 1069 865 2 1047 193 361 26 69 chr13 60646029 60646145 -59638167 - MIRb SINE MIR -154 114 4 2 1047 432 250 19 0 chr13 60647894 60647998 -59636314 + PB1D10 SINE Alu 5 110 -7 2 1047 21 0 0 0 chr13 60648867 60648888 -59635424 + AT_rich Low_complexity Low_complexity 1 21 0 2 1047 419 52 17 0 chr13 60648923 60648981 -59635331 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1047 294 284 60 52 chr13 60648997 60649016 -59635296 + B1F2 SINE Alu 5 139 -10 2 1047 404 287 17 0 chr13 60649016 60649131 -59635181 + ID_B1 SINE B4 98 214 -10 2 1047 366 23 0 0 chr13 60649397 60649440 -59634872 + (TTG)n Simple_repeat Simple_repeat 1 43 0 2 1047 520 143 254 18 chr13 60649452 60649566 -59634746 - B1_Mur2 SINE Alu -8 141 1 2 1047 350 220 10 20 chr13 60650313 60650415 -59633897 - MLT1A1 LTR MaLR -2 406 306 2 1047 219 69 0 0 chr13 60651177 60651206 -59633106 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 1047 231 114 0 0 chr13 60652397 60652432 -59631880 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2 1047 1223 61 0 0 chr13 60652432 60652595 -59631717 - B2_Mm2 SINE B2 -31 164 2 2 1047 281 293 74 15 chr13 60652657 60652792 -59631520 - ERVL-B4-int LTR ERVL -3072 2642 2500 2 1047 421 266 37 59 chr13 60654141 60654277 -59630035 - B3A SINE B2 0 198 66 2 1047 539 261 8 8 chr13 60654288 60654419 -59629893 + B3 SINE B2 86 216 0 2 1047 785 292 95 43 chr13 60655162 60655488 -59628824 + MER34A LTR ERV1 1 343 -228 2 1047 283 61 0 58 chr13 60655488 60655540 -59628772 + (CCCCCT)n Simple_repeat Simple_repeat 6 54 0 2 1047 1188 96 56 17 chr13 60655835 60655853 -59628459 - B2_Mm1a SINE B2 -4 189 162 2 1047 423 0 0 0 chr13 60655853 60655900 -59628412 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 2 1047 1188 96 56 17 chr13 60655900 60656061 -59628251 - B2_Mm1a SINE B2 -32 161 4 2 1047 849 206 57 72 chr13 60656724 60657078 -59627234 + RLTRETN_Mm LTR ERVK 6 403 0 2 1047 1514 153 97 16 chr13 60657081 60657400 -59626912 + Lx9 LINE L1 7294 7638 -6 2 1047 456 229 207 0 chr13 60657424 60657564 -59626748 + ID_B1 SINE B4 2 170 -54 2 1047 262 138 0 33 chr13 60657586 60657601 -59626711 + polypurine Low_complexity Low_complexity 2 16 0 2 1047 1294 56 6 11 chr13 60657601 60657782 -59626530 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 3 1047 262 138 0 33 chr13 60657782 60657826 -59626486 + polypurine Low_complexity Low_complexity 17 59 0 3 1047 662 213 16 0 chr13 60657938 60658065 -59626247 - ID_B1 SINE B4 -1 223 95 3 1047 399 259 45 0 chr13 60659163 60659275 -59625037 - PB1D10 SINE Alu 0 117 1 3 1047 2477 87 28 14 chr13 60659576 60659939 -59624373 - RLTR9A LTR ERVK 0 368 1 3 1047 1173 228 81 6 chr13 60660683 60660871 -59623441 - ORR1D2 LTR MaLR 0 370 178 3 1047 468 0 0 0 chr13 60660871 60660923 -59623389 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1047 1173 228 81 6 chr13 60660923 60661056 -59623256 - ORR1D2 LTR MaLR -193 177 26 3 1047 1396 159 9 22 chr13 60661292 60661517 -59622795 - URR1A DNA MER1_type -4 222 1 3 1047 608 162 269 0 chr13 60661584 60661744 -59622568 + MTD LTR MaLR 179 381 -38 3 1047 1811 225 11 16 chr13 60662196 60662571 -59621741 - ORR1D1 LTR MaLR -1 373 1 3 1047 2254 76 18 73 chr13 60662763 60663105 -59621207 - ORR1A2 LTR MaLR 0 327 5 3 1047 511 278 93 97 chr13 60663285 60663544 -59620768 + MTEa LTR MaLR 118 375 -4 3 1047 348 24 0 0 chr13 60663614 60663655 -59620657 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1047 242 229 0 10 chr13 60663748 60663845 -59620467 + GA-rich Low_complexity Low_complexity 2 97 0 3 1047 189 0 0 0 chr13 60663937 60663958 -59620354 + (TC)n Simple_repeat Simple_repeat 2 22 0 3 1047 540 136 0 0 chr13 60663958 60664046 -59620266 + (TA)n Simple_repeat Simple_repeat 2 89 0 3 1047 210 91 0 0 chr13 60664105 60664138 -59620174 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 1047 214 322 8 34 chr13 60664194 60664313 -59619999 + CT-rich Low_complexity Low_complexity 1 116 0 3 1047 255 125 0 0 chr13 60664429 60664469 -59619843 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1047 643 173 101 43 chr13 60664473 60664612 -59619700 - B1_Mur2 SINE Alu -1 148 2 3 1047 751 287 41 41 chr13 60664634 60664925 -59619387 + B4A SINE B4 1 291 -1 3 1047 3262 53 2 5 chr13 60665202 60665603 -59618709 + MTB LTR MaLR 1 400 0 3 1047 414 238 0 37 chr13 60666427 60666536 -59617776 - ORR1E LTR MaLR -13 366 262 3 1047 2843 147 44 6 chr13 60666580 60667085 -59617227 - RLTR28 LTR ERVL 0 524 1 3 1047 871 248 74 41 chr13 60667236 60667480 -59616832 - ORR1E LTR MaLR -107 252 1 3 1047 2929 151 52 13 chr13 60667667 60668203 -59616109 - RLTR31_Mm LTR ERVK 0 561 5 3 1047 1088 76 7 7 chr13 60668859 60669004 -59615308 + B1_Mm SINE Alu 2 146 -1 3 1047 258 163 0 0 chr13 60669855 60669904 -59614408 + L1M LINE L1 5256 5304 -820 3 1047 2154 123 9 58 chr13 60669931 60670277 -59614035 + ORR1A4 LTR MaLR 1 329 0 3 1047 666 105 11 0 chr13 60670387 60670482 -59613830 + MTC LTR MaLR 1 96 -325 3 1047 240 35 0 0 chr13 60670596 60670625 -59613687 + (CTAAT)n Simple_repeat Simple_repeat 3 31 0 3 1047 437 281 126 100 chr13 60670753 60670800 -59613512 + RMER1B Other Other 36 102 -964 3 1047 315 0 0 0 chr13 60670800 60670835 -59613477 + (GA)n Simple_repeat Simple_repeat 1 35 0 3 1047 437 281 126 100 chr13 60670835 60670977 -59613335 + RMER1B Other Other 103 230 -836 3 1047 2003 167 48 21 chr13 60670975 60671312 -59613000 + RMER1A Other Other 332 677 -353 3 1047 2332 145 54 3 chr13 60671312 60671699 -59612613 + MTB_Mm LTR MaLR 1 407 0 3 1047 2018 147 116 0 chr13 60671819 60672172 -59612140 - ORR1B1 LTR MaLR 0 394 1 3 1047 189 107 0 0 chr13 60672515 60672543 -59611769 + (A)n Simple_repeat Simple_repeat 1 28 0 3 1047 966 146 34 28 chr13 60672910 60673086 -59611226 + B2_Mm2 SINE B2 1 177 -18 3 1047 1006 91 0 0 chr13 60673227 60673359 -59610953 - B1_Mus1 SINE Alu -4 144 13 3 1047 469 256 62 83 chr13 60673229 60673374 -59610938 - B4 SINE B4 -72 220 79 3 1047 632 205 152 13 chr13 60673408 60673566 -59610746 - B3A SINE B2 -18 180 1 3 1047 908 50 16 0 chr13 60673804 60673925 -59610387 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 3 1047 3192 165 33 0 chr13 60673928 60674480 -59609832 - Lx2 LINE L1 -6 6991 6422 3 1047 837 197 43 16 chr13 60674679 60674865 -59609447 + B2_Mm2 SINE B2 2 192 -3 3 1047 243 0 0 0 chr13 60675062 60675089 -59609223 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1047 261 250 12 24 chr13 60676469 60676551 -59607761 + ID2 SINE ID 3 83 0 3 1047 333 0 0 0 chr13 60676683 60676720 -59607592 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 3 1047 1075 89 43 101 chr13 60676729 60676762 -59607550 - B2_Mm2 SINE B2 -18 177 163 3 1047 180 0 0 0 chr13 60676762 60676782 -59607530 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 3 1047 1075 89 43 101 chr13 60676782 60676936 -59607376 - B2_Mm2 SINE B2 -33 162 1 3 1047 393 39 0 0 chr13 60676948 60676999 -59607313 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 3 1047 1115 90 0 0 chr13 60676999 60677144 -59607168 - B1_Mus2 SINE Alu -2 145 1 3 1047 833 199 37 47 chr13 60677754 60677944 -59606368 - RMER10B LTR ERVL -17 381 194 3 1047 981 164 75 83 chr13 60677920 60678172 -59606140 - RMER10B LTR ERVL -146 252 3 3 1047 365 245 20 39 chr13 60678246 60678348 -59605964 + RSINE1 SINE B4 3 102 -63 3 1047 761 219 14 0 chr13 60678698 60678844 -59605468 - B1_Mur1 SINE Alu 0 149 2 3 1047 296 293 30 20 chr13 60679036 60679137 -59605175 - Lx8 LINE L1 -300 7173 7072 3 1047 235 208 0 0 chr13 60679417 60679470 -59604842 + L1MA6 LINE L1 6248 6300 0 3 1047 310 290 118 30 chr13 60680276 60680411 -59603901 - ORR1E LTR MaLR -210 149 3 3 1047 2976 79 18 0 chr13 60680460 60680852 -59603460 + MTB_Mm LTR MaLR 1 399 -8 3 1047 471 35 0 0 chr13 60680853 60680910 -59603402 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1047 257 286 0 0 chr13 60680917 60680980 -59603332 + (TGGA)n Simple_repeat Simple_repeat 3 65 0 3 1047 1020 112 130 0 chr13 60681166 60681335 -59602977 + B2_Mm2 SINE B2 2 192 -3 3 1047 381 43 0 0 chr13 60681399 60681446 -59602866 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1047 410 282 0 37 chr13 60681509 60681645 -59602667 + B1_Mur1 SINE Alu 5 135 -14 3 1047 24 32 0 0 chr13 60681654 60681685 -59602627 + AT_rich Low_complexity Low_complexity 1 31 0 3 1047 22 70 0 0 chr13 60681707 60681750 -59602562 + AT_rich Low_complexity Low_complexity 1 43 0 3 1047 615 51 0 0 chr13 60682015 60682094 -59602218 + (TC)n Simple_repeat Simple_repeat 1 79 0 3 1047 286 285 15 37 chr13 60682105 60682240 -59602072 + CT-rich Low_complexity Low_complexity 6 137 0 3 1047 208 250 0 0 chr13 60682286 60682330 -59601982 + GA-rich Low_complexity Low_complexity 3 46 0 3 1047 754 262 27 27 chr13 60682630 60682850 -59601462 + B4A SINE B4 9 228 -64 3 1047 636 335 86 21 chr13 60682929 60683255 -59601057 - MLT2C1 LTR ERVL -3 394 48 3 1047 225 0 0 0 chr13 60683481 60683506 -59600806 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1047 977 239 9 40 chr13 60683593 60683815 -59600497 + B3 SINE B2 2 216 0 3 1047 381 130 0 0 chr13 60683925 60683979 -59600333 - ORR1C2 LTR MaLR 0 384 331 3 1047 7487 69 7 18 chr13 60683991 60684598 -59599714 - L1_Mus2 LINE L1 -1 6565 5962 3 1047 1058 96 0 0 chr13 60684598 60684734 -59599578 - B1_Mm SINE Alu -11 136 1 3 1047 7487 90 2 22 chr13 60684734 60685890 -59598422 - L1_Mus2 LINE L1 -605 5961 4839 3 1047 1194 257 32 40 chr13 60685890 60686238 -59598074 - ORR1C2 LTR MaLR -39 345 1 3 1047 280 204 19 0 chr13 60686238 60686292 -59598020 - MIR SINE MIR -99 163 109 3 1048 508 292 58 49 chr13 60687215 60687299 -59597013 + B4 SINE B4 1 224 -67 3 1048 812 188 0 0 chr13 60687299 60687437 -59596875 + B1_Mur3 SINE Alu 11 148 -1 3 1048 358 242 87 72 chr13 60687456 60687594 -59596718 + B4A SINE B4 82 221 -71 3 1048 474 263 40 63 chr13 60687601 60687727 -59596585 + RSINE1 SINE B4 2 124 -41 3 1048 209 207 52 0 chr13 60687758 60687816 -59596496 + A-rich Low_complexity Low_complexity 6 66 0 3 1048 705 268 61 20 chr13 60687829 60688027 -59596285 + B3 SINE B2 11 216 0 3 1048 399 248 19 40 chr13 60688064 60688218 -59596094 + B3A SINE B2 4 213 -3 3 1048 298 276 1 62 chr13 60688231 60688320 -59595992 + B4A SINE B4 190 274 -18 3 1048 288 170 0 0 chr13 60688434 60688487 -59595825 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1048 543 31 0 0 chr13 60689170 60689235 -59595077 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1048 1293 120 16 0 chr13 60689335 60689526 -59594786 + B2_Mm2 SINE B2 1 194 -1 3 1048 1224 54 0 0 chr13 60689636 60689783 -59594529 - B1_Mm SINE Alu 0 147 1 3 1048 643 260 141 0 chr13 60689834 60690026 -59594286 + ID_B1 SINE B4 2 220 -4 3 1048 378 303 110 46 chr13 60690419 60690637 -59593675 + B4 SINE B4 1 232 -60 3 1048 1276 86 11 16 chr13 60691112 60691301 -59593011 + B2_Mm2 SINE B2 8 195 0 3 1048 318 256 77 0 chr13 60691469 60691547 -59592765 + PB1D7 SINE Alu 34 117 -3 3 1048 222 37 0 0 chr13 60691686 60691713 -59592599 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1048 1196 74 0 0 chr13 60691713 60691861 -59592451 - B1_Mus1 SINE Alu 0 148 1 3 1048 2881 55 8 19 chr13 60692017 60692391 -59591921 + L1Md_F2 LINE L1 6212 6581 -1 3 1048 498 219 100 8 chr13 60693713 60693833 -59590479 - B3A SINE B2 -67 131 1 3 1048 573 212 192 16 chr13 60693862 60694016 -59590296 + ORR1D2 LTR MaLR 1 186 -184 3 1048 1520 70 5 6 chr13 60694016 60694245 -59590067 + MTB LTR MaLR 1 228 -179 3 1048 1186 249 165 22 chr13 60694254 60694419 -59589893 + L1MC1 LINE L1 5459 5653 -680 3 1048 2521 71 3 55 chr13 60694419 60694764 -59589548 - ORR1A2 LTR MaLR 0 327 1 3 1048 1186 249 165 22 chr13 60694764 60695096 -59589216 + L1MC1 LINE L1 5654 6027 -306 3 1048 210 37 0 0 chr13 60695298 60695325 -59588987 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1048 1194 82 0 0 chr13 60695327 60695474 -59588838 - B1_Mus1 SINE Alu 0 148 2 3 1048 261 0 0 0 chr13 60695555 60695584 -59588728 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1048 543 280 173 31 chr13 60695646 60695970 -59588342 + ORR1D2 LTR MaLR 1 370 0 4 1048 1145 69 0 20 chr13 60696035 60696183 -59588129 + B1_Mus1 SINE Alu 4 148 0 4 1048 971 209 25 10 chr13 60696636 60696839 -59587473 - B3 SINE B2 -6 210 5 4 1048 358 268 98 0 chr13 60697253 60697365 -59586947 - B1F2 SINE Alu -20 129 7 4 1048 1238 42 0 0 chr13 60697719 60697861 -59586451 + B1_Mus2 SINE Alu 1 142 -5 4 1048 21 0 0 0 chr13 60698138 60698159 -59586153 + AT_rich Low_complexity Low_complexity 1 21 0 4 1048 587 133 66 16 chr13 60699095 60699217 -59585095 - RMER10A LTR ERVL -4 438 311 4 1048 668 255 0 26 chr13 60699532 60699685 -59584627 - B3A SINE B2 -49 149 1 4 1048 737 244 72 38 chr13 60699759 60699968 -59584344 + B3 SINE B2 1 216 0 4 1048 495 0 0 0 chr13 60700636 60700691 -59583621 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1048 1184 56 0 0 chr13 60700693 60700835 -59583477 - B1_Mus1 SINE Alu -6 142 1 4 1048 248 91 23 0 chr13 60700861 60700905 -59583407 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1048 527 226 17 9 chr13 60700908 60701024 -59583288 - RSINE1 SINE B4 -44 121 5 4 1048 231 200 22 0 chr13 60701026 60701071 -59583241 - MIRc SINE MIR -115 153 108 4 1048 1010 80 29 0 chr13 60701515 60701652 -59582660 - B1_Mus2 SINE Alu -6 141 1 4 1048 217 159 0 22 chr13 60701986 60702031 -59582281 + (TTG)n Simple_repeat Simple_repeat 3 46 0 4 1048 465 344 0 0 chr13 60702179 60702310 -59582002 - ID_B1 SINE B4 -27 197 67 4 1048 510 287 44 87 chr13 60702620 60702849 -59581463 - MER33 DNA MER1_type -72 252 34 4 1048 261 0 0 0 chr13 60703078 60703107 -59581205 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1048 25 0 0 0 chr13 60703506 60703531 -59580781 + GC_rich Low_complexity Low_complexity 1 25 0 4 1048 198 0 0 0 chr13 60704873 60704895 -59579417 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 4 1048 2503 98 0 3 chr13 60705944 60706272 -59578040 - ORR1A2 LTR MaLR 0 327 1 4 1048 407 293 29 82 chr13 60706351 60706522 -59577790 - B2_Mm2 SINE B2 -19 176 15 4 1048 378 0 0 0 chr13 60707157 60707199 -59577113 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1048 360 0 0 0 chr13 60707618 60707658 -59576654 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1048 457 303 76 54 chr13 60707672 60707948 -59576364 - B4A SINE B4 -8 284 3 4 1048 270 0 0 0 chr13 60709795 60709825 -59574487 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1048 280 265 16 42 chr13 60709950 60710065 -59574247 - ORR1E LTR MaLR -195 164 1 4 1048 690 13 0 0 chr13 60711162 60711241 -59573071 + (TTCC)n Simple_repeat Simple_repeat 3 81 0 4 1048 345 191 0 60 chr13 60711284 60711351 -59572961 - HAL1-3A_ME LINE L1 -821 2037 1975 4 1048 339 283 54 0 chr13 60711453 60711545 -59572767 - B4A SINE B4 -195 97 1 4 1048 515 197 116 43 chr13 60711561 60711699 -59572613 - B1_Mur1 SINE Alu 0 149 2 4 1048 345 218 111 33 chr13 60712970 60713060 -59571252 + B4A SINE B4 127 223 -69 4 1048 257 354 0 0 chr13 60713154 60713250 -59571062 + (CATA)n Simple_repeat Simple_repeat 3 98 0 4 1048 389 20 20 0 chr13 60713281 60713331 -59570981 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1048 246 323 130 30 chr13 60714190 60714321 -59569991 + MIRb SINE MIR 108 251 -17 4 1048 544 195 138 0 chr13 60714349 60714472 -59569840 + B1_Mur1 SINE Alu 5 144 -5 4 1048 299 193 0 12 chr13 60714984 60715068 -59569244 + G-rich Low_complexity Low_complexity 6 88 0 4 1048 917 133 13 47 chr13 60715160 60715310 -59569002 - B1_Mur4 SINE Alu 0 150 6 4 1048 377 244 7 146 chr13 60715204 60715348 -59568964 - MT2B LTR ERVL -343 258 135 4 1048 798 241 96 10 chr13 60715962 60716159 -59568153 + B3 SINE B2 2 215 -1 4 1048 194 0 39 0 chr13 60718006 60718032 -59566280 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 4 1048 1185 68 0 0 chr13 60718041 60718187 -59566125 - B1_Mus2 SINE Alu -1 146 1 4 1048 288 333 42 89 chr13 60718254 60718445 -59565867 - B3A SINE B2 -7 191 10 4 1048 204 40 0 0 chr13 60719030 60719055 -59565257 + (TC)n Simple_repeat Simple_repeat 2 26 0 4 1048 231 61 0 0 chr13 60719164 60719197 -59565115 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1048 234 241 84 84 chr13 60719848 60719943 -59564369 - RMER6C LTR ERVK -588 102 8 4 1048 206 0 0 65 chr13 60720757 60720788 -59563524 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 4 1048 1953 75 84 11 chr13 60723657 60723942 -59560370 - ORR1A2 LTR MaLR 0 327 22 4 1048 1079 186 5 31 chr13 60724032 60724226 -59560086 - B3 SINE B2 -27 189 1 4 1048 280 59 19 19 chr13 60724277 60724329 -59559983 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 4 1048 490 150 38 57 chr13 60724330 60724436 -59559876 - B1_Mur4 SINE Alu 0 150 47 4 1048 315 251 106 22 chr13 60724444 60724591 -59559721 - L1ME1 LINE L1 -2052 5943 5789 4 1048 261 291 123 108 chr13 60724680 60724892 -59559420 + Tigger7 DNA MER2_type 2277 2491 0 4 1048 3395 168 88 16 chr13 60725048 60725690 -59558622 - RMER19A LTR ERVK 0 737 1 4 1048 875 71 167 0 chr13 60727605 60727731 -59556581 + B1_Mus2 SINE Alu 1 147 0 4 1048 279 0 0 0 chr13 60727846 60727877 -59556435 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 4 1048 544 302 32 0 chr13 60728876 60729002 -59555310 + B4A SINE B4 43 172 -120 4 1048 397 179 0 39 chr13 60729567 60729695 -59554617 + GA-rich Low_complexity Low_complexity 2 124 0 4 1048 450 0 0 0 chr13 60729826 60729876 -59554436 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1048 233 266 8 148 chr13 60730149 60730277 -59554035 + B1_Mur1 SINE Alu 40 149 0 4 1048 1004 101 127 0 chr13 60730431 60730589 -59553723 + B2_Mm1t SINE B2 2 179 -14 4 1048 383 164 300 26 chr13 60730606 60730756 -59553556 + B2_Mm2 SINE B2 3 193 -2 4 1048 239 293 19 57 chr13 60731157 60731262 -59553050 + MER58B DNA MER1_type 2 100 -241 4 1048 871 225 37 11 chr13 60731238 60731427 -59552885 - B2_Mm2 SINE B2 -1 194 1 4 1048 545 262 126 25 chr13 60731430 60731669 -59552643 + MER58B DNA MER1_type 79 341 0 4 1048 39 38 0 0 chr13 60731889 60731942 -59552370 + AT_rich Low_complexity Low_complexity 1 53 0 4 1048 224 222 0 0 chr13 60732080 60732125 -59552187 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1048 22 70 0 0 chr13 60732132 60732175 -59552137 + AT_rich Low_complexity Low_complexity 1 43 0 4 1048 470 180 10 0 chr13 60732233 60732333 -59551979 + CT-rich Low_complexity Low_complexity 2 102 0 4 1048 474 289 42 7 chr13 60734184 60734327 -59549985 - B1_Mus1 SINE Alu 0 148 1 4 1048 1136 95 0 0 chr13 60734388 60734535 -59549777 + B1_Mm SINE Alu 1 147 0 4 1048 283 44 44 0 chr13 60734537 60734582 -59549730 + (GAAA)n Simple_repeat Simple_repeat 2 48 0 4 1048 669 257 79 17 chr13 60734610 60734788 -59549524 - B3A SINE B2 -8 190 2 4 1048 366 218 31 43 chr13 60734896 60735059 -59549253 + (TG)n Simple_repeat Simple_repeat 1 161 0 4 1048 504 234 263 0 chr13 60736595 60736766 -59547546 + B3 SINE B2 1 216 0 4 1048 1266 21 0 14 chr13 60736847 60736995 -59547317 - B1_Mm SINE Alu 0 147 2 4 1048 524 238 59 2 chr13 60737663 60737860 -59546452 + Lx8 LINE L1 5349 5597 -700 4 1048 481 212 135 32 chr13 60737869 60738062 -59546250 + B3 SINE B2 1 195 0 4 1048 406 88 0 29 chr13 60738062 60738132 -59546180 + (GAAA)n Simple_repeat Simple_repeat 1 68 0 4 1048 718 248 138 16 chr13 60738149 60738447 -59545865 + Lx8 LINE L1 5557 5912 -1561 4 1048 293 62 0 20 chr13 60739743 60739792 -59544520 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 4 1048 780 223 45 20 chr13 60739801 60740002 -59544310 - B3 SINE B2 -10 206 1 4 1048 733 222 7 0 chr13 60740209 60740344 -59543968 + ID_B1 SINE B4 89 224 0 4 1048 450 233 26 25 chr13 60740593 60740724 -59543588 - B1F2 SINE Alu -1 148 8 4 1048 475 241 17 8 chr13 60741170 60741287 -59543025 - PB1D9 SINE Alu -1 119 2 4 1048 476 248 149 42 chr13 60741574 60741789 -59542523 - MER74A LTR ERVL -8 550 313 4 1048 246 95 0 0 chr13 60742335 60742377 -59541935 + (T)n Simple_repeat Simple_repeat 1 42 0 4 1048 1173 113 0 0 chr13 60742503 60742680 -59541632 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 4 1048 891 183 0 0 chr13 60742692 60742867 -59541445 + CT-rich Low_complexity Low_complexity 4 178 0 4 1048 475 329 103 45 chr13 60742938 60743161 -59541151 + B4 SINE B4 8 243 -49 4 1048 240 35 0 0 chr13 60743986 60744015 -59540297 + (A)n Simple_repeat Simple_repeat 1 29 0 4 1048 302 270 0 98 chr13 60744017 60744099 -59540213 + B4 SINE B4 219 292 0 4 1048 238 250 30 45 chr13 60745041 60745108 -59539204 + MLT1A1 LTR MaLR 343 408 0 4 1048 829 274 58 45 chr13 60746025 60746334 -59537978 + ORR1E LTR MaLR 24 336 -23 4 1048 1685 191 91 35 chr13 60746339 60746714 -59537598 + MTD LTR MaLR 1 396 -23 4 1048 456 324 104 77 chr13 60747087 60747308 -59537004 - B4A SINE B4 -56 236 10 4 1048 474 18 0 0 chr13 60747585 60747640 -59536672 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1048 297 300 60 60 chr13 60747870 60747987 -59536325 + PB1D10 SINE Alu 1 117 0 4 1048 1221 68 0 0 chr13 60747992 60748139 -59536173 + B1_Mus2 SINE Alu 1 147 0 4 1048 291 114 0 0 chr13 60748139 60748183 -59536129 + (A)n Simple_repeat Simple_repeat 1 44 0 4 1048 549 322 109 29 chr13 60748192 60748569 -59535743 - Lx8 LINE L1 -1269 6204 5798 4 1048 702 298 107 52 chr13 60748568 60748915 -59535397 + Lx8 LINE L1 6201 6566 -907 4 1048 706 244 38 49 chr13 60748927 60749112 -59535200 + B3A SINE B2 1 183 -15 5 1048 353 222 23 0 chr13 60749112 60749283 -59535029 + (CA)n Simple_repeat Simple_repeat 2 176 0 5 1048 200 269 0 0 chr13 60749294 60749428 -59534884 + (CA)n Simple_repeat Simple_repeat 1 134 0 5 1048 1233 41 0 0 chr13 60749469 60749614 -59534698 + B1_Mus2 SINE Alu 2 146 -1 5 1048 180 152 0 0 chr13 60749774 60749807 -59534505 + CT-rich Low_complexity Low_complexity 4 36 0 5 1048 286 257 0 26 chr13 60749855 60749931 -59534381 - PB1D10 SINE Alu -42 75 2 5 1048 271 181 49 0 chr13 60751701 60751777 -59532535 - MIR SINE MIR -79 183 104 5 1048 382 256 10 13 chr13 60751814 60751904 -59532408 - B1F SINE Alu -9 140 46 5 1048 481 300 7 37 chr13 60751950 60752085 -59532227 - B4A SINE B4 0 292 162 5 1048 637 236 106 68 chr13 60753068 60753332 -59530980 + B4 SINE B4 1 274 -18 5 1048 346 281 52 0 chr13 60755008 60755104 -59529208 - PB1D10 SINE Alu -16 101 1 5 1048 290 301 0 12 chr13 60755104 60755188 -59529124 - Tigger5 DNA MER2_type -2314 92 10 5 1048 250 299 92 25 chr13 60755382 60755502 -59528810 + MER3 DNA MER1_type 69 196 -13 5 1048 648 227 0 0 chr13 60755924 60756100 -59528212 + (TG)n Simple_repeat Simple_repeat 1 176 0 5 1048 644 227 3 0 chr13 60756112 60756441 -59527871 + (TG)n Simple_repeat Simple_repeat 1 330 0 5 1048 317 239 11 22 chr13 60756503 60756593 -59527719 - L1MB2 LINE L1 -4 6167 6079 5 1048 212 86 0 28 chr13 60756897 60756933 -59527379 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 5 1048 494 131 0 45 chr13 60756935 60757047 -59527265 + CT-rich Low_complexity Low_complexity 3 109 0 5 1048 297 0 0 0 chr13 60758460 60758493 -59525819 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1048 298 152 0 0 chr13 60759091 60759137 -59525175 - B1F SINE Alu -7 142 97 5 1048 602 178 37 0 chr13 60759140 60759247 -59525065 - B1_Mur1 SINE Alu -27 122 12 5 1048 5934 69 16 5 chr13 60759265 60760069 -59524243 - L1_Mus1 LINE L1 0 6567 5781 5 1048 397 0 38 0 chr13 60760272 60760325 -59523987 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 5 1048 1206 81 0 0 chr13 60760326 60760486 -59523826 - B2_Mm2 SINE B2 -35 160 1 5 1048 293 217 0 16 chr13 60763093 60763154 -59521158 - RSINE1 SINE B4 -97 68 9 5 1048 451 266 11 0 chr13 60763627 60763721 -59520591 - B4A SINE B4 -194 98 4 5 1048 694 263 89 0 chr13 60763741 60763931 -59520381 - B3 SINE B2 -9 207 1 5 1048 565 162 38 9 chr13 60763954 60764060 -59520252 - PB1D10 SINE Alu -8 109 1 5 1048 838 262 83 11 chr13 60764289 60764555 -59519757 + B4 SINE B4 2 286 -6 5 1048 225 94 0 0 chr13 60765068 60765100 -59519212 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1048 456 19 0 0 chr13 60765122 60765175 -59519137 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1048 252 250 24 73 chr13 60766571 60766653 -59517659 + ID4 SINE ID 6 83 0 5 1048 1261 63 74 6 chr13 60766677 60766852 -59517460 + B2_Mm2 SINE B2 2 188 -7 5 1048 207 0 0 0 chr13 60767596 60767619 -59516693 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1048 594 244 37 74 chr13 60767637 60767651 -59516661 - B2_Mm1t SINE B2 -2 191 180 5 1048 679 145 186 0 chr13 60767651 60767775 -59516537 - B1_Mur4 SINE Alu 0 150 4 5 1048 787 179 70 54 chr13 60767775 60767950 -59516362 - B2_Mm2 SINE B2 -14 179 2 5 1048 2818 169 2 77 chr13 60768269 60768840 -59515472 - RLTR12B LTR ERVK 0 528 1 5 1048 225 320 113 16 chr13 60769421 60769545 -59514767 - MLT1J LTR MaLR -105 407 272 5 1048 257 175 175 0 chr13 60769584 60769647 -59514665 - MLT1J LTR MaLR -334 178 105 5 1048 234 250 0 28 chr13 60769990 60770097 -59514215 + C-rich Low_complexity Low_complexity 3 106 0 5 1048 285 185 0 18 chr13 60770666 60770721 -59513591 + B4A SINE B4 9 62 -230 5 1048 786 207 0 0 chr13 60770970 60771221 -59513091 + (TG)n Simple_repeat Simple_repeat 1 251 0 5 1048 532 277 109 174 chr13 60771612 60771905 -59512407 + B4 SINE B4 1 274 -18 5 1048 320 270 80 0 chr13 60772419 60772519 -59511793 - L1M5 LINE L1 -424 5700 5593 5 1048 411 176 14 0 chr13 60772972 60773046 -59511266 - B1F SINE Alu -2 147 73 5 1048 303 304 108 102 chr13 60773705 60773881 -59510431 - MER2 DNA MER2_type -1 344 168 5 1048 210 211 17 17 chr13 60774164 60774222 -59510090 + (TCCA)n Simple_repeat Simple_repeat 4 61 0 5 1048 230 298 52 31 chr13 60774592 60774689 -59509623 + MLT1E2 LTR MaLR 1 99 -528 5 1048 309 142 6 0 chr13 60774894 60774949 -59509363 + B1_Mm SINE Alu 61 117 -32 5 1048 482 176 12 0 chr13 60774942 60775027 -59509285 - B1_Mur4 SINE Alu -64 86 1 5 1048 303 233 9 151 chr13 60775027 60775048 -59509264 - MT2B LTR ERVL -361 240 150 5 1048 1468 58 15 20 chr13 60775280 60775475 -59508837 + B2_Mm2 SINE B2 2 195 0 5 1048 189 0 0 0 chr13 60776343 60776364 -59507948 + (TCC)n Simple_repeat Simple_repeat 2 22 0 5 1048 754 204 181 6 chr13 60777836 60777953 -59506359 + B4 SINE B4 1 139 -153 5 1048 753 12 0 0 chr13 60777953 60778039 -59506273 + (CCCTAA)n Simple_repeat Simple_repeat 3 88 0 5 1048 754 204 181 6 chr13 60778039 60778098 -59506214 + B4 SINE B4 140 208 -84 5 1048 1298 194 20 61 chr13 60778102 60778392 -59505920 + ORR1C2 LTR MaLR 65 342 -42 5 1048 955 70 12 112 chr13 60778392 60778553 -59505759 + B1_Mus1 SINE Alu 2 146 -2 5 1048 280 226 0 0 chr13 60778582 60778635 -59505677 + ORR1C2 LTR MaLR 330 382 -2 5 1048 208 354 0 0 chr13 60778694 60778776 -59505536 + (CATA)n Simple_repeat Simple_repeat 3 84 0 5 1048 574 298 42 42 chr13 60779339 60779598 -59504714 - Lx8 LINE L1 -1577 5896 5638 5 1048 562 289 26 0 chr13 60779724 60779880 -59504432 - RSINE1 SINE B4 0 165 6 5 1048 896 299 35 20 chr13 60779889 60780289 -59504023 - Lx8 LINE L1 -317 5563 5158 5 1048 310 237 26 26 chr13 60780631 60780709 -59503603 + PB1D9 SINE Alu 42 119 -1 5 1048 338 318 70 70 chr13 60780687 60780900 -59503412 + Charlie5 DNA MER1_type 2412 2624 0 5 1048 362 186 22 15 chr13 60781249 60781385 -59502927 + (TCTA)n Simple_repeat Simple_repeat 3 139 0 5 1048 299 202 0 11 chr13 60781406 60781501 -59502811 + (TATG)n Simple_repeat Simple_repeat 2 95 0 5 1048 483 18 0 0 chr13 60781515 60781571 -59502741 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1048 337 272 188 14 chr13 60781588 60781726 -59502586 - ID_B1 SINE B4 -59 165 4 5 1048 206 224 0 128 chr13 60782345 60782540 -59501772 + (CACAT)n Simple_repeat Simple_repeat 5 174 0 5 1048 254 208 0 126 chr13 60782780 60782978 -59501334 + (CACAT)n Simple_repeat Simple_repeat 5 177 0 5 1048 231 218 0 126 chr13 60783156 60783355 -59500957 + (CACAT)n Simple_repeat Simple_repeat 4 177 0 5 1048 1041 244 186 14 chr13 60784853 60785132 -59499180 + ORR1E LTR MaLR 33 359 0 5 1048 180 111 0 0 chr13 60786220 60786247 -59498065 + (TCCG)n Simple_repeat Simple_repeat 2 28 0 5 1048 618 288 32 99 chr13 60786247 60786548 -59497764 - B4A SINE B4 -10 282 2 5 1048 183 80 0 0 chr13 60786616 60786641 -59497671 + (TCCG)n Simple_repeat Simple_repeat 1 25 0 5 1048 748 203 32 5 chr13 60787166 60787354 -59496958 - Lx2B LINE L1 0 7000 6808 5 1048 315 267 0 95 chr13 60787878 60787994 -59496318 + ID_B1 SINE B4 72 176 -48 5 1048 227 275 0 70 chr13 60788234 60788320 -59495992 + PB1D10 SINE Alu 38 117 0 5 1048 235 140 52 17 chr13 60790732 60790790 -59493522 + GA-rich Low_complexity Low_complexity 3 62 0 5 1048 249 240 0 0 chr13 60791231 60791306 -59493006 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 1048 817 284 84 28 chr13 60791328 60791578 -59492734 - B4A SINE B4 0 292 29 5 1048 276 284 15 0 chr13 60791572 60791644 -59492668 - BC1_Mm scRNA scRNA -78 74 2 5 1048 519 293 115 18 chr13 60791897 60792123 -59492189 + MER82 DNA MER2_type 88 335 -318 5 1048 270 0 0 0 chr13 60792360 60792390 -59491922 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1048 771 238 103 26 chr13 60792415 60792609 -59491703 + B3 SINE B2 3 211 -5 5 1048 700 257 39 6 chr13 60793081 60793261 -59491051 + ORR1D2 LTR MaLR 1 186 -184 5 1048 258 220 0 0 chr13 60793283 60793333 -59490979 + ORR1D2 LTR MaLR 308 357 -2 5 1048 2002 130 20 68 chr13 60793932 60793983 -59490329 - ORR1A1 LTR MaLR -8 338 292 5 1048 1512 57 10 0 chr13 60793983 60794176 -59490136 - B2_Mm2 SINE B2 0 195 1 5 1048 2002 130 20 68 chr13 60794176 60794479 -59489833 - ORR1A1 LTR MaLR -55 291 1 5 1048 582 198 0 26 chr13 60795974 60796247 -59488065 + (TG)n Simple_repeat Simple_repeat 1 265 0 5 1048 226 348 130 30 chr13 60796576 60796807 -59487505 - MLT1K LTR MaLR 0 610 357 5 1048 230 353 30 92 chr13 60796901 60797032 -59487280 - MLT1K LTR MaLR -387 208 86 5 1048 438 154 0 0 chr13 60797322 60797400 -59486912 + GA-rich Low_complexity Low_complexity 3 80 0 5 1048 207 185 76 15 chr13 60798078 60798144 -59486168 + CT-rich Low_complexity Low_complexity 3 72 0 5 1048 3659 13 0 0 chr13 60798957 60799353 -59484959 + MTA_Mm LTR MaLR 1 396 0 5 1048 359 341 185 27 chr13 60799406 60799665 -59484647 - L1M5 LINE L1 -407 5772 5473 5 1048 376 289 87 107 chr13 60800455 60800811 -59483501 - ORR1E LTR MaLR 0 359 11 5 1048 1193 64 0 6 chr13 60800962 60801135 -59483177 + (TTCTC)n Simple_repeat Simple_repeat 4 175 0 5 1048 1239 34 0 20 chr13 60801184 60801333 -59482979 - B1_Mus2 SINE Alu 0 147 2 5 1048 886 133 34 27 chr13 60801724 60801871 -59482441 + B1_Mur4 SINE Alu 3 150 0 5 1048 453 286 155 11 chr13 60801901 60802088 -59482224 - ID_B1 SINE B4 -7 217 4 5 1048 585 281 112 36 chr13 60802149 60802426 -59481886 + MLT1C LTR MaLR 8 305 -162 5 1048 522 46 0 0 chr13 60802487 60802552 -59481760 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1048 234 294 62 20 chr13 60802771 60802917 -59481395 - L1MB2 LINE L1 -6 6165 6014 5 1048 1529 236 71 65 chr13 60804472 60805105 -59479207 - Lx9 LINE L1 0 7644 7008 5 1048 188 303 30 15 chr13 60807250 60807317 -59476995 + L2 LINE L2 2436 2503 -916 5 1048 306 0 0 0 chr13 60807404 60807438 -59476874 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1048 3170 63 13 0 chr13 60807683 60808077 -59476235 + MTB LTR MaLR 1 399 -1 6 1048 406 297 51 0 chr13 60809711 60809849 -59474463 + RMER15 LTR ERVL 422 566 -9 6 1048 228 35 0 0 chr13 60810829 60810858 -59473454 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 6 1048 427 261 36 48 chr13 60811489 60811654 -59472658 - RSINE1 SINE B4 0 165 3 6 1048 244 227 63 65 chr13 60811682 60811798 -59472514 - MLT1J1 LTR MaLR -240 208 92 6 1048 369 0 0 0 chr13 60812636 60812677 -59471635 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1048 504 336 44 49 chr13 60813852 60814077 -59470235 + MER58A DNA MER1_type 1 224 0 6 1048 594 155 0 0 chr13 60814413 60814529 -59469783 + CT-rich Low_complexity Low_complexity 1 116 0 6 1048 1196 146 0 10 chr13 60814565 60814605 -59469707 - B2_Mm2 SINE B2 -3 192 154 6 1048 462 36 0 0 chr13 60814605 60814661 -59469651 + (TATG)n Simple_repeat Simple_repeat 4 59 0 6 1048 1196 146 0 10 chr13 60814661 60814814 -59469498 - B2_Mm2 SINE B2 -42 153 1 6 1048 242 103 77 0 chr13 60815202 60815241 -59469071 + MER63D DNA AcHobo 1020 1061 0 6 1048 864 249 15 30 chr13 60816143 60816342 -59467970 + B3 SINE B2 15 210 -6 6 1048 333 0 0 0 chr13 60816983 60817020 -59467292 + (GA)n Simple_repeat Simple_repeat 1 37 0 6 1049 324 289 92 19 chr13 60817675 60817820 -59466492 + B4A SINE B4 89 237 -55 6 1049 238 82 20 39 chr13 60819265 60819316 -59464996 + (TTTG)n Simple_repeat Simple_repeat 3 52 0 6 1049 321 131 0 0 chr13 60820105 60820166 -59464146 + (TG)n Simple_repeat Simple_repeat 1 61 0 6 1049 1122 169 39 10 chr13 60820314 60820517 -59463795 - B3 SINE B2 -6 210 2 6 1049 567 335 4 77 chr13 60820517 60820750 -59463562 - B4A SINE B4 -76 216 1 6 1049 1239 48 0 0 chr13 60822589 60822735 -59461577 + B1_Mus2 SINE Alu 2 147 0 6 1049 849 226 75 19 chr13 60822787 60822999 -59461313 - ID_B1 SINE B4 0 224 1 6 1049 396 0 0 0 chr13 60824724 60824768 -59459544 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1049 582 54 0 0 chr13 60825370 60825444 -59458868 + (CA)n Simple_repeat Simple_repeat 2 75 0 6 1049 363 60 0 0 chr13 60826084 60826134 -59458178 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1049 243 286 143 0 chr13 60827656 60827775 -59456537 - L1MC4a LINE L1 -2 7880 7745 6 1049 1432 79 5 0 chr13 60828421 60828610 -59455702 + B2_Mm1t SINE B2 3 192 -1 6 1049 198 0 0 0 chr13 60828950 60828972 -59455340 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 6 1049 1280 50 0 0 chr13 60828972 60829132 -59455180 - B2_Mm2 SINE B2 -34 161 2 6 1049 1155 72 7 0 chr13 60829133 60829286 -59455026 - B2_Mm2 SINE B2 -41 154 1 6 1049 911 140 6 0 chr13 60829311 60829482 -59454830 + (GA)n Simple_repeat Simple_repeat 2 173 0 6 1049 271 360 36 0 chr13 60830050 60830161 -59454151 - MIRc SINE MIR -60 208 94 6 1049 267 286 21 21 chr13 60831452 60831545 -59452767 + MER20 DNA MER1_type 53 145 -74 6 1049 26 0 0 0 chr13 60832789 60832815 -59451497 + AT_rich Low_complexity Low_complexity 1 26 0 6 1049 358 159 13 0 chr13 60832825 60832895 -59451417 - B2_Mm2 SINE B2 -95 121 48 6 1049 1309 85 23 0 chr13 60832963 60833139 -59451173 - B2_Mm2 SINE B2 -14 181 2 6 1049 406 278 55 18 chr13 60834076 60834186 -59450126 + PB1D7 SINE Alu 6 119 -1 6 1049 348 291 18 9 chr13 60834767 60834878 -59449434 + CT-rich Low_complexity Low_complexity 2 113 0 6 1049 541 49 0 24 chr13 60835339 60835422 -59448890 + (CA)n Simple_repeat Simple_repeat 1 81 0 6 1049 1349 88 5 5 chr13 60836023 60836207 -59448105 + B2_Mm1t SINE B2 2 185 -8 6 1049 768 244 81 20 chr13 60836757 60836954 -59447358 - B3 SINE B2 -7 209 1 6 1049 287 338 13 0 chr13 60837100 60837177 -59447135 - MER119 DNA MER1_type -501 82 5 6 1049 272 290 28 42 chr13 60838567 60838639 -59445673 + Cheshire DNA MER1_type 173 243 -2177 6 1049 222 105 0 0 chr13 60838671 60838709 -59445603 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1049 206 177 65 0 chr13 60838916 60838978 -59445334 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 1049 296 335 199 0 chr13 60839686 60839892 -59444420 - Charlie5 DNA MER1_type -13 2611 2365 6 1049 390 367 77 6 chr13 60840341 60840522 -59443790 + MER20 DNA MER1_type 19 212 -7 6 1049 795 247 33 22 chr13 60841673 60841855 -59442457 + B3 SINE B2 2 185 -31 6 1049 247 274 0 52 chr13 60842337 60842414 -59441898 + ID SINE ID 1 73 -151 6 1049 974 221 122 0 chr13 60842412 60842634 -59441678 - MTC LTR MaLR -169 252 4 6 1049 1164 179 14 14 chr13 60845950 60846171 -59438141 + URR1B DNA MER1_type 1 221 -4 6 1049 196 306 41 0 chr13 60846921 60846970 -59437342 + MIR3 SINE MIR 105 155 -53 6 1049 274 344 152 30 chr13 60847304 60847436 -59436876 + RSINE1 SINE B4 3 150 -15 6 1049 255 31 0 0 chr13 60847437 60847469 -59436843 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1049 288 93 0 0 chr13 60848365 60848408 -59435904 + ORR1A2 LTR MaLR 2 44 -283 6 1049 358 254 206 17 chr13 60849112 60849292 -59435020 + L1MB7 LINE L1 5938 6151 -33 6 1049 259 193 0 66 chr13 60850906 60850967 -59433345 + MIRm SINE MIR 215 271 -5 6 1049 789 192 110 35 chr13 60854778 60854978 -59429334 + B3 SINE B2 1 215 -1 6 1049 415 360 16 0 chr13 60856235 60856360 -59427952 + B4A SINE B4 2 128 -164 6 1049 456 19 0 0 chr13 60856360 60856413 -59427899 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 1049 1017 252 121 91 chr13 60856416 60857146 -59427166 - RMER12 LTR ERVK -1074 774 16 6 1049 748 237 108 49 chr13 60857868 60858072 -59426240 - B3 SINE B2 0 216 1 6 1049 396 0 0 0 chr13 60859131 60859175 -59425137 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1049 531 45 0 0 chr13 60859176 60859242 -59425070 + (GA)n Simple_repeat Simple_repeat 2 67 0 6 1049 234 62 0 0 chr13 60859500 60859532 -59424780 + (TTAG)n Simple_repeat Simple_repeat 2 33 0 6 1049 224 248 16 44 chr13 60861053 60861143 -59423169 + PB1D9 SINE Alu 59 145 -4 6 1049 243 61 0 0 chr13 60861430 60861463 -59422849 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1049 507 190 196 0 chr13 60861716 60861879 -59422433 - Lx5 LINE L1 -1 7049 6855 6 1049 275 146 18 0 chr13 60863581 60863636 -59420676 + GA-rich Low_complexity Low_complexity 3 58 0 6 1049 186 43 0 0 chr13 60863908 60863931 -59420381 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 6 1049 208 162 0 26 chr13 60864404 60864442 -59419870 + (CATATA)n Simple_repeat Simple_repeat 3 39 0 6 1049 396 248 92 25 chr13 60865122 60865242 -59419070 - RMER12 LTR ERVK 0 1322 1195 6 1049 765 208 300 55 chr13 60865235 60865618 -59418694 - RMER12 LTR ERVK -317 1491 739 6 1049 225 119 0 0 chr13 60865618 60865660 -59418652 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1049 462 257 37 103 chr13 60865745 60865922 -59418390 - RMER12 LTR ERVK -997 811 609 6 1049 7252 84 11 63 chr13 60865922 60865961 -59418351 - MT-int LTR MaLR -4 1094 1059 6 1049 207 0 0 0 chr13 60865961 60865984 -59418328 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1049 462 257 37 103 chr13 60865984 60866010 -59418302 - RMER12 LTR ERVK -1200 608 585 6 1049 7252 84 11 63 chr13 60866010 60867098 -59417214 - MT-int LTR MaLR -40 1058 1 6 1049 2807 51 64 8 chr13 60867098 60867473 -59416839 - MTA_Mm LTR MaLR 0 396 1 6 1049 295 122 0 20 chr13 60867473 60867523 -59416789 + MurSatRep1 Unknown Unknown 961 1009 -1128 6 1049 476 227 135 55 chr13 60867514 60867677 -59416635 + MurSatRep1 Unknown Unknown 1558 1733 -404 6 1049 1673 252 102 50 chr13 60867977 60868618 -59415694 - RLTR22_Mur LTR ERVK -546 858 1 6 1049 608 278 15 0 chr13 60868712 60868845 -59415467 + ID_B1 SINE B4 82 216 -8 6 1049 304 277 45 57 chr13 60868859 60868947 -59415365 + B4A SINE B4 4 90 -202 6 1049 198 0 0 0 chr13 60868958 60868980 -59415332 + (G)n Simple_repeat Simple_repeat 1 22 0 6 1049 29 28 0 0 chr13 60869633 60869669 -59414643 + AT_rich Low_complexity Low_complexity 1 36 0 6 1049 350 184 0 34 chr13 60869687 60869758 -59414554 + B1_Mur4 SINE Alu 1 68 -80 6 1049 626 137 16 64 chr13 60870179 60870304 -59414008 + B1_Mur3 SINE Alu 26 144 -5 6 1049 6873 204 43 24 chr13 60870305 60870593 -59413719 - Lx6 LINE L1 -26 7434 7142 6 1049 426 20 0 0 chr13 60870593 60870644 -59413668 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1049 6873 204 43 24 chr13 60870644 60871761 -59412551 - Lx6 LINE L1 -319 7141 6001 6 1049 251 360 6 22 chr13 60871819 60871998 -59412314 + (TATATG)n Simple_repeat Simple_repeat 4 179 0 6 1049 405 0 0 0 chr13 60872891 60872936 -59411376 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1049 309 51 0 0 chr13 60874560 60874599 -59409713 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1049 1291 93 28 0 chr13 60874628 60874810 -59409502 + B2_Mm2 SINE B2 8 194 -1 6 1049 1018 160 38 72 chr13 60875482 60875718 -59408594 + Lx9 LINE L1 7290 7517 -127 6 1049 593 205 69 32 chr13 60875699 60875916 -59408396 + Lx9 LINE L1 7419 7643 -1 6 1049 507 299 106 14 chr13 60876057 60876349 -59407963 - Lx7 LINE L1 -233 7463 7145 6 1049 247 327 158 22 chr13 60877041 60877319 -59406993 - L1MB4 LINE L1 -244 5936 5621 6 1049 447 19 0 0 chr13 60877333 60877385 -59406927 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 1049 2937 75 31 0 chr13 60877422 60877810 -59406502 + MTB_Mm LTR MaLR 1 400 -7 6 1049 720 156 61 23 chr13 60877810 60877941 -59406371 - B1_Mur3 SINE Alu -11 138 3 6 1049 198 0 0 0 chr13 60878404 60878426 -59405886 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1049 594 254 8 0 chr13 60878443 60878561 -59405751 - RSINE1 SINE B4 -31 134 16 6 1049 236 315 48 14 chr13 60878567 60878712 -59405600 - L1MB4 LINE L1 -1118 5028 4879 6 1049 1103 289 114 14 chr13 60879022 60879390 -59404922 + MER31A LTR ERV1 4 408 -77 6 1049 452 239 47 40 chr13 60879935 60880083 -59404229 - B1_Mur3 SINE Alu 0 149 1 6 1049 302 336 83 11 chr13 60880458 60880735 -59403577 - L1MB7 LINE L1 -58 6126 5830 6 1049 579 66 0 0 chr13 60881595 60881671 -59402641 + (TTTC)n Simple_repeat Simple_repeat 3 78 0 7 1049 1216 200 9 0 chr13 60881976 60882191 -59402121 + MTD LTR MaLR 3 219 -200 7 1049 274 333 42 89 chr13 60882911 60883125 -59401187 - Tigger7 DNA MER2_type -2284 207 4 7 1049 29 0 0 0 chr13 60884393 60884422 -59399890 + AT_rich Low_complexity Low_complexity 1 29 0 7 1049 438 20 0 0 chr13 60886959 60887010 -59397302 + (TC)n Simple_repeat Simple_repeat 1 51 0 7 1049 304 309 116 5 chr13 60889301 60889490 -59394822 - L1M3 LINE L1 -492 5688 5479 7 1049 1257 61 0 7 chr13 60889630 60889779 -59394533 - B1_Mus1 SINE Alu 0 148 1 7 1049 600 14 0 0 chr13 60889839 60889908 -59394404 + (TC)n Simple_repeat Simple_repeat 1 69 0 7 1049 229 323 42 21 chr13 60889933 60890028 -59394284 - RSINE1 SINE B4 -53 112 16 7 1049 468 0 0 0 chr13 60890690 60890742 -59393570 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1049 3902 186 99 12 chr13 60890754 60891525 -59392787 - Lx5 LINE L1 -7 7043 6206 7 1049 562 164 71 59 chr13 60891569 60891738 -59392574 - Lx9 LINE L1 -8 7636 7466 7 1049 875 257 14 0 chr13 60891725 60891947 -59392365 + Lx9 LINE L1 7017 7241 -403 7 1049 2350 197 30 38 chr13 60892221 60893054 -59391258 - L1_Mur1 LINE L1 -2415 1497 670 7 1049 233 266 0 0 chr13 60893380 60893444 -59390868 + L1_Mur2 LINE L1 4898 4961 -916 7 1049 656 79 171 26 chr13 60893668 60893785 -59390527 + MTB_Mm LTR MaLR 1 134 -266 7 1049 17510 147 11 29 chr13 60893787 60895504 -59388808 + L1_Mm LINE L1 1452 3120 -2763 7 1049 3093 91 10 5 chr13 60895504 60895900 -59388412 - MTB LTR MaLR -2 398 1 7 1049 17510 147 11 29 chr13 60895900 60897355 -59386957 + L1_Mm LINE L1 3121 4567 -1316 7 1049 624 119 212 65 chr13 60897352 60897503 -59386809 + Lx LINE L1 6457 6637 -17 7 1049 723 24 0 0 chr13 60897503 60897588 -59386724 + (TA)n Simple_repeat Simple_repeat 2 86 0 7 1049 624 119 212 65 chr13 60897588 60897606 -59386706 + Lx LINE L1 6638 6650 -4 7 1049 2144 77 3 21 chr13 60897606 60897897 -59386415 + MTB_Mm LTR MaLR 122 407 0 7 1049 730 188 16 0 chr13 60899095 60899223 -59385089 + B3 SINE B2 1 130 -86 7 1049 598 235 52 0 chr13 60899275 60899411 -59384901 + B1_Mur3 SINE Alu 1 143 -6 7 1049 23 0 0 0 chr13 60905317 60905340 -59378972 + AT_rich Low_complexity Low_complexity 1 23 0 7 1049 3806 163 38 9 chr13 60905449 60906134 -59378178 - Lx4B LINE L1 -423 6635 5931 7 1049 834 215 5 43 chr13 60906135 60906344 -59377968 - L1_Mur2 LINE L1 -6004 708 508 7 1049 503 189 74 0 chr13 60907213 60907361 -59376951 - Lx9 LINE L1 -7 7637 7479 7 1049 373 281 26 100 chr13 60907376 60907566 -59376746 + Lx9 LINE L1 7066 7241 -403 7 1049 296 317 93 29 chr13 60908276 60908448 -59375864 + MER5A DNA MER1_type 7 189 0 7 1049 491 43 14 0 chr13 60908758 60908828 -59375484 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 7 1049 495 314 127 10 chr13 60908917 60909413 -59374899 - L1MB7 LINE L1 -85 6099 5546 7 1049 432 319 48 20 chr13 60910952 60911239 -59373073 - L1MB7 LINE L1 -584 5860 5548 7 1049 346 254 0 0 chr13 60911258 60911329 -59372983 + L1_Mur3 LINE L1 5045 5115 -765 7 1049 536 236 23 73 chr13 60911372 60911591 -59372721 + L1_Rod LINE L1 5273 5480 -367 7 1049 5467 199 74 19 chr13 60911614 60912341 -59371971 + RMER12 LTR ERVK 15 767 -555 7 1049 525 32 0 0 chr13 60912341 60912404 -59371908 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 7 1049 5467 199 74 19 chr13 60912404 60912444 -59371868 + RMER12 LTR ERVK 768 819 -503 7 1049 357 24 0 0 chr13 60912444 60912486 -59371826 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1049 5467 199 74 19 chr13 60912486 60912955 -59371357 + RMER12 LTR ERVK 820 1318 -4 7 1049 891 270 35 16 chr13 60912976 60913232 -59371080 + L1_Rod LINE L1 5508 5768 -79 7 1049 296 291 171 44 chr13 60914607 60914630 -59369682 + B4 SINE B4 68 157 -135 7 1049 558 214 17 26 chr13 60914630 60914745 -59369567 + PB1D9 SINE Alu 6 119 -1 7 1049 296 291 171 44 chr13 60914745 60914765 -59369547 + B4 SINE B4 158 246 -46 7 1049 650 254 209 0 chr13 60914868 60915045 -59369267 - B3 SINE B2 0 216 3 7 1049 519 344 16 36 chr13 60915233 60915483 -59368829 + B4A SINE B4 5 249 -43 7 1049 374 182 7 55 chr13 60916731 60916876 -59367436 + CT-rich Low_complexity Low_complexity 1 138 0 7 1049 21 0 0 0 chr13 60917464 60917485 -59366827 + AT_rich Low_complexity Low_complexity 1 21 0 7 1049 6990 165 51 19 chr13 60917485 60919314 -59364998 - Lx5 LINE L1 -6 7044 5151 7 1049 259 271 40 48 chr13 60919336 60919436 -59364876 + L1M2 LINE L1 5696 5799 -501 7 1049 432 0 0 0 chr13 60919436 60919484 -59364828 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1049 259 271 40 48 chr13 60919484 60919507 -59364805 + L1M2 LINE L1 5800 5818 -482 7 1049 737 84 3 0 chr13 60919641 60919735 -59364577 + B1_Mus2 SINE Alu 40 133 -14 7 1049 221 0 35 0 chr13 60919735 60919764 -59364548 + (CAAA)n Simple_repeat Simple_repeat 4 33 0 7 1049 737 71 0 0 chr13 60919764 60919777 -59364535 + B1_Mus2 SINE Alu 134 146 -1 7 1049 761 254 91 26 chr13 60920057 60920359 -59363953 + L1MA6 LINE L1 5646 5993 -307 7 1049 272 175 16 0 chr13 60920408 60920471 -59363841 + GA-rich Low_complexity Low_complexity 3 66 0 7 1049 3127 67 38 3 chr13 60920519 60920911 -59363401 - L1_Mus2 LINE L1 0 6566 6161 7 1049 425 375 61 0 chr13 60922147 60922443 -59361869 + Lx8 LINE L1 6960 7273 -200 7 1049 235 308 111 0 chr13 60922471 60922588 -59361724 + L1M2 LINE L1 5485 5614 -686 7 1049 237 236 185 46 chr13 60923187 60923338 -59360974 + L1M3 LINE L1 2146 2317 -3826 7 1049 1206 292 79 50 chr13 60923359 60923539 -59360773 + MT2A LTR ERVL 1 200 -333 7 1049 1286 189 23 0 chr13 60923539 60923756 -59360556 + URR1A DNA MER1_type 1 222 -4 7 1049 1206 293 84 47 chr13 60923756 60924049 -59360263 + MT2A LTR ERVL 201 535 -19 7 1049 194 143 24 0 chr13 60924066 60924089 -59360223 + polypyrimidine Low_complexity Low_complexity 22 45 0 7 1049 1067 134 6 0 chr13 60924089 60924268 -59360044 + (TC)n Simple_repeat Simple_repeat 1 180 0 7 1049 194 143 24 0 chr13 60924268 60924286 -59360026 + polypyrimidine Low_complexity Low_complexity 4 21 0 7 1049 501 246 90 55 chr13 60924298 60924667 -59359645 + L1M3 LINE L1 4392 4802 -1338 7 1049 23 68 0 0 chr13 60924699 60924743 -59359569 + AT_rich Low_complexity Low_complexity 1 44 0 7 1049 35 0 0 0 chr13 60924809 60924844 -59359468 + AT_rich Low_complexity Low_complexity 1 35 0 7 1049 3764 46 9 7 chr13 60924866 60925307 -59359005 - L1Md_F3 LINE L1 0 6584 6143 7 1049 3660 28 2 0 chr13 60925310 60925705 -59358607 - MTA_Mm LTR MaLR 0 396 1 7 1049 9863 33 2 0 chr13 60925705 60926801 -59357511 - MTA_Mm-int LTR MaLR 0 1098 1 7 1049 1681 39 0 10 chr13 60926801 60927009 -59357303 - MTA_Mm LTR MaLR 0 396 191 7 1049 2512 87 12 0 chr13 60927009 60927353 -59356959 - L1_Mus1 LINE L1 -282 6285 5938 7 1049 180 176 0 0 chr13 60928721 60928755 -59355557 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1049 2362 94 16 0 chr13 60929477 60929796 -59354516 - L1_Mus3 LINE L1 -5 6633 6310 7 1049 25 0 0 0 chr13 60929812 60929837 -59354475 + AT_rich Low_complexity Low_complexity 1 25 0 7 1049 18521 4 0 0 chr13 60929890 60931925 -59352387 + L1Md_A LINE L1 3552 5586 -297 7 1049 9591 4 0 0 chr13 60931925 60932921 -59351391 + L1Md_A LINE L1 5587 6582 0 7 1049 2690 123 55 2 chr13 60933226 60933642 -59350670 + Lx2B LINE L1 6556 6993 -7 7 1049 2191 272 49 15 chr13 60934000 60934862 -59349450 - L1_Mur3 LINE L1 -1840 4040 3150 7 1049 766 282 46 7 chr13 60934872 60935175 -59349137 + L1_Mur3 LINE L1 4088 4402 -1478 7 1049 569 278 117 86 chr13 60935835 60935876 -59348436 + Lx8 LINE L1 6932 6971 -502 7 1049 3502 43 2 5 chr13 60935876 60936273 -59348039 + MTA_Mm LTR MaLR 1 396 0 7 1049 569 278 117 86 chr13 60936273 60936581 -59347731 + Lx8 LINE L1 6972 7292 -181 7 1049 342 0 0 0 chr13 60936585 60936623 -59347689 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1049 8282 75 11 29 chr13 60938145 60939253 -59345059 - Lx3_Mus LINE L1 0 7009 5922 7 1049 636 50 0 0 chr13 60939256 60939336 -59344976 + (TTTTC)n Simple_repeat Simple_repeat 4 83 0 7 1049 4705 84 15 1 chr13 60939351 60940143 -59344169 - Lx3B LINE L1 -898 6083 5263 7 1049 219 36 0 0 chr13 60941043 60941071 -59343241 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 7 1049 23 0 0 0 chr13 60943168 60943191 -59341121 + AT_rich Low_complexity Low_complexity 1 23 0 7 1049 1958 121 81 40 chr13 60943317 60943663 -59340649 - RMER1B Other Other 0 1066 707 7 1049 554 114 142 9 chr13 60943685 60943791 -59340521 + B1_Mus1 SINE Alu 7 126 -22 7 1049 243 103 0 0 chr13 60943837 60943876 -59340436 + (TC)n Simple_repeat Simple_repeat 2 40 0 7 1049 312 91 0 0 chr13 60943876 60943920 -59340392 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1049 4400 124 121 38 chr13 60944651 60945471 -59338841 - RMER17A2 LTR ERVK -18 888 1 7 1049 396 0 0 0 chr13 60945534 60945578 -59338734 + (TC)n Simple_repeat Simple_repeat 2 45 0 7 1049 291 28 0 0 chr13 60945578 60945613 -59338699 + (TA)n Simple_repeat Simple_repeat 1 36 0 7 1049 468 0 0 0 chr13 60946246 60946298 -59338014 + (TA)n Simple_repeat Simple_repeat 1 52 0 7 1049 1987 286 58 17 chr13 60946989 60947454 -59336858 - L1_Mur3 LINE L1 -1913 3967 3478 7 1049 3161 39 10 25 chr13 60947454 60947846 -59336466 - L1Md_F2 LINE L1 0 6582 6197 7 1049 1987 286 58 17 chr13 60947846 60948137 -59336175 - L1_Mur3 LINE L1 -2403 3477 3181 7 1049 1314 140 85 0 chr13 60948164 60948400 -59335912 + Lx5 LINE L1 4917 5172 -705 7 131 6854 168 54 34 chr13 60948405 60949963 -59334349 + Lx5 LINE L1 5460 7050 0 7 1050 301 108 0 43 chr13 60949974 60950046 -59334266 + B1_Mur4 SINE Alu 57 150 0 7 1050 318 296 19 67 chr13 60950331 60950436 -59333876 + B1_Mur1 SINE Alu 49 148 -1 7 1050 1891 251 54 50 chr13 60950869 60951676 -59332636 + Lx7 LINE L1 5108 5904 -1792 7 1050 951 308 92 26 chr13 60951772 60952039 -59332273 + Lx7 LINE L1 7056 7349 -124 7 1050 261 0 0 0 chr13 60952039 60952068 -59332244 + (TAA)n Simple_repeat Simple_repeat 3 31 0 7 1050 951 308 92 26 chr13 60952068 60952190 -59332122 + Lx7 LINE L1 7350 7470 -3 7 1050 10719 95 2 0 chr13 60952215 60952512 -59331800 + L1_Mus1 LINE L1 4434 4731 -1152 7 1050 207 0 0 0 chr13 60952512 60952535 -59331777 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1050 10719 65 10 0 chr13 60952535 60954352 -59329960 + L1_Mus1 LINE L1 4732 6567 0 7 1050 3762 117 128 17 chr13 60955500 60956143 -59328169 + RMER19A LTR ERVK 24 737 0 7 1050 279 226 16 16 chr13 60956943 60957006 -59327306 + Lx9 LINE L1 7408 7470 -174 7 1050 23 0 0 0 chr13 60957103 60957126 -59327186 + AT_rich Low_complexity Low_complexity 1 23 0 7 1050 36155 36 0 0 chr13 60957202 60962866 -59321446 + L1Md_T LINE L1 1 5589 -297 7 1050 9555 5 0 3 chr13 60962866 60963865 -59320447 + L1Md_T LINE L1 5590 6585 0 7 1050 209 217 0 0 chr13 60966463 60966509 -59317803 + T-rich Low_complexity Low_complexity 1 46 0 7 1050 1163 99 99 0 chr13 60966522 60966693 -59317619 + B2_Mm2 SINE B2 1 188 -7 7 1050 314 304 132 0 chr13 60967083 60967271 -59317041 - L1MB3 LINE L1 0 6183 5969 8 1050 496 225 38 23 chr13 60967763 60967895 -59316417 + MER31A LTR ERV1 102 235 -250 8 1050 801 188 0 0 chr13 60968049 60968273 -59316039 + GA-rich Low_complexity Low_complexity 1 224 0 8 1050 263 279 0 0 chr13 60968849 60968917 -59315395 - Lx9 LINE L1 -1115 6529 6462 8 1050 605 282 44 55 chr13 60968919 60969212 -59315100 - L1MB7 LINE L1 0 6184 5895 8 1050 4737 216 26 7 chr13 60969682 60970570 -59313742 - Lx5 LINE L1 0 7050 6146 8 1050 462 257 56 4 chr13 60970570 60970698 -59313614 - Lx9 LINE L1 -1176 6468 6367 8 1050 702 123 0 0 chr13 60970705 60970835 -59313477 + (TC)n Simple_repeat Simple_repeat 2 131 0 8 1050 2337 262 92 69 chr13 60970964 60971171 -59313141 - Lx9 LINE L1 -1638 6006 5739 8 1050 183 129 0 0 chr13 60971171 60971202 -59313110 + (TA)n Simple_repeat Simple_repeat 1 31 0 8 1050 2337 248 42 60 chr13 60971202 60971937 -59312375 - Lx9 LINE L1 -109 5738 5004 8 1050 1302 174 13 4 chr13 60972530 60972755 -59311557 + RLTR17 LTR ERVK 202 428 -264 8 1050 353 271 32 48 chr13 60972755 60972879 -59311433 - Lx9 LINE L1 -1687 5957 5836 8 1050 1654 269 106 32 chr13 60972924 60973454 -59310858 + Lx5 LINE L1 6475 7043 -7 8 1050 315 0 0 0 chr13 60976125 60976160 -59308152 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1050 1043 86 0 7 chr13 60976160 60976301 -59308011 - B1_Mus1 SINE Alu -3 145 6 8 1050 516 16 0 0 chr13 60976330 60976391 -59307921 + (CA)n Simple_repeat Simple_repeat 1 61 0 8 1050 620 286 6 33 chr13 60976391 60976572 -59307740 - RMER15 LTR ERVL -54 521 346 8 1050 1053 269 133 34 chr13 60976835 60977219 -59307093 + MTC-int LTR MaLR 741 1162 -96 8 1050 429 20 0 0 chr13 60977219 60977269 -59307043 + (TTA)n Simple_repeat Simple_repeat 1 50 0 8 1050 607 326 45 76 chr13 60977269 60977346 -59306966 + MTD-int LTR MaLR 1019 1097 -1 8 1050 1090 273 100 8 chr13 60977350 60977730 -59306582 + MTD LTR MaLR 5 419 0 8 1050 480 336 50 93 chr13 60977730 60978087 -59306225 - RCHARR1 DNA MER1_type -593 381 41 8 1050 1355 161 4 39 chr13 60978704 60978936 -59305376 - URR1B DNA MER1_type 0 225 2 8 1050 189 0 0 0 chr13 60979343 60979364 -59304948 + (AAATG)n Simple_repeat Simple_repeat 3 23 0 8 1050 6624 50 24 2 chr13 60979779 60980573 -59303739 + Lx3_Mus LINE L1 6199 7009 0 8 1050 225 314 107 0 chr13 60980683 60980804 -59303508 + MER31A LTR ERV1 147 280 -205 8 1050 23 0 0 0 chr13 60980804 60980827 -59303485 + AT_rich Low_complexity Low_complexity 1 23 0 8 1050 462 272 109 34 chr13 60981029 60981204 -59303108 + MER31A LTR ERV1 298 485 0 8 1050 37928 23 1 7 chr13 60981326 60986514 -59297798 + L1Md_A LINE L1 440 5586 -297 8 1050 9014 31 0 1 chr13 60986514 60987511 -59296801 + L1Md_A LINE L1 5587 6582 0 8 1050 23774 15 0 1 chr13 60987511 60990207 -59294105 + L1Md_A LINE L1 2894 5587 -296 8 1050 9259 17 1 0 chr13 60990208 60991200 -59293112 + L1Md_A LINE L1 5589 6581 -1 8 1050 369 265 101 14 chr13 60991385 60991523 -59292789 - RMER15 LTR ERVL -71 504 355 8 1050 2821 311 19 30 chr13 60992250 60993216 -59291096 - MERVL_2A-int LTR ERVL -1732 4029 3075 8 1050 2082 207 39 29 chr13 60993228 60993308 -59291004 - L1_Mur3 LINE L1 -4085 1795 1721 8 1050 366 23 0 0 chr13 60993316 60993359 -59290953 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 8 1050 1218 69 0 7 chr13 60993359 60993496 -59290816 - B1_Mus2 SINE Alu -9 138 2 8 1050 2082 207 39 29 chr13 60993496 60993751 -59290561 - L1_Mur3 LINE L1 -4160 1720 1466 8 1050 3090 87 15 24 chr13 60993751 60994162 -59290150 - MTB_Mm LTR MaLR 0 407 1 8 1050 2082 222 39 57 chr13 60994162 60994736 -59289576 - L1_Mur3 LINE L1 -4415 1465 897 8 1050 228 320 13 58 chr13 60994766 60994922 -59289390 - L1_Mur3 LINE L1 -7170 558 410 8 1050 1091 343 132 21 chr13 60995540 60996215 -59288097 + MTE-int LTR MaLR 772 1521 -59 8 1050 583 250 127 0 chr13 60998139 60998367 -59285945 + Lx9 LINE L1 7388 7644 0 8 1050 1321 14 0 13 chr13 60998367 60998516 -59285796 + B1_Mus2 SINE Alu 1 147 0 8 1050 234 261 0 0 chr13 60998516 60998585 -59285727 + A-rich Low_complexity Low_complexity 1 69 0 8 1050 520 214 16 8 chr13 60999873 61000000 -59284312 + L1_Mur3 LINE L1 2657 2784 -3096 8 1050 771 201 45 14 chr13 61000001 61000223 -59284089 + L1_Mur3 LINE L1 2786 3014 -2866 1 1050 2709 137 35 17 chr13 61000224 61000685 -59283627 + RLTR31B_Mm LTR ERVK 3 471 -86 2 1050 428 196 10 0 chr13 61000699 61000796 -59283516 + L1_Mur3 LINE L1 3008 3105 -2775 1 1050 804 182 0 7 chr13 61000808 61000963 -59283349 + L1_Mur3 LINE L1 4446 4599 -1281 1 1050 23 33 0 0 chr13 61001076 61001106 -59283206 + AT_rich Low_complexity Low_complexity 1 30 0 3 1050 344 248 38 94 chr13 61001164 61001260 -59283052 + Lx9 LINE L1 7326 7427 -217 4 1050 6381 33 0 0 chr13 61001260 61002010 -59282302 + L1Md_T LINE L1 5833 6582 0 5 1050 344 248 38 94 chr13 61002010 61002073 -59282239 + Lx9 LINE L1 7428 7476 -168 4 1050 446 194 39 8 chr13 61002073 61002203 -59282109 + Lx9 LINE L1 7509 7642 -2 4 1050 27 0 0 0 chr13 61002592 61002619 -59281693 + AT_rich Low_complexity Low_complexity 1 27 0 6 1050 4170 35 0 0 chr13 61004054 61004542 -59279770 - L1Md_T LINE L1 -1 6581 6094 7 1050 3908 26 0 0 chr13 61004542 61005191 -59279121 + L1Md_A LINE L1 5420 6068 -514 8 1050 462 305 95 15 chr13 61006666 61006866 -59277446 + B3 SINE B2 1 216 0 9 1050 1874 160 35 6 chr13 61006876 61007216 -59277096 + Lx3B LINE L1 6618 6967 -6 1 1050 492 153 0 0 chr13 61007226 61007311 -59277001 + (TAG)n Simple_repeat Simple_repeat 1 85 0 1 1050 1545 266 45 7 chr13 61007757 61008184 -59276128 + Lx6 LINE L1 7011 7453 -7 1 1050 189 103 0 94 chr13 61008292 61008345 -59275967 + (TCTCTG)n Simple_repeat Simple_repeat 3 49 0 1 1050 2685 31 65 0 chr13 61008345 61008670 -59275642 + ORR1A1 LTR MaLR 1 346 0 1 1050 189 103 0 94 chr13 61008670 61008680 -59275632 + (TCTCTG)n Simple_repeat Simple_repeat 5 14 0 1 1050 597 162 11 6 chr13 61008673 61008847 -59275465 + (TCTA)n Simple_repeat Simple_repeat 2 176 0 1 1050 434 318 45 23 chr13 61009170 61009302 -59275010 + RSINE1 SINE B4 3 137 -28 1 1050 300 70 0 0 chr13 61009320 61009363 -59274949 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1050 435 38 0 0 chr13 61009365 61009418 -59274894 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1050 612 0 0 0 chr13 61009421 61009489 -59274823 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 2 1050 525 239 216 5 chr13 61009515 61009700 -59274612 + ORR1D1 LTR MaLR 126 349 -25 2 1050 599 293 92 80 chr13 61009988 61010404 -59273908 + MER31A LTR ERV1 29 442 -24 2 1050 228 186 0 0 chr13 61010995 61011038 -59273274 + RMER15 LTR ERVL 88 130 -445 2 1050 4948 103 18 50 chr13 61011108 61012056 -59272256 + L1VL2 LINE L1 223 1154 -2461 2 1050 10983 102 10 5 chr13 61012056 61014294 -59270018 - L1VL4 LINE L1 -995 2822 570 2 1050 1160 50 0 0 chr13 61014773 61014914 -59269398 - B1_Mm SINE Alu -6 141 1 2 1050 536 336 17 8 chr13 61014936 61015170 -59269142 + MERVL_2A-int LTR ERVL 2947 3182 -2532 2 1050 794 269 128 52 chr13 61015372 61015740 -59268572 - RLTR22_Mur LTR ERVK -1043 805 410 2 1050 371 188 61 145 chr13 61015764 61015895 -59268417 + RLTR23 LTR ERV1 311 430 0 2 1050 553 302 26 0 chr13 61015895 61016084 -59268228 + MERVL_2A-int LTR ERVL 3289 3482 -2279 2 1050 35 24 0 0 chr13 61016192 61016234 -59268078 + AT_rich Low_complexity Low_complexity 1 42 0 3 1050 1069 103 0 0 chr13 61016311 61016457 -59267855 + B1_Mus1 SINE Alu 2 147 -1 3 1050 326 23 23 0 chr13 61016458 61016501 -59267811 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1050 183 42 0 0 chr13 61016572 61016596 -59267716 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1050 2922 80 12 2 chr13 61016767 61017170 -59267142 - MTB_Mm LTR MaLR 0 407 1 3 1050 1775 268 43 45 chr13 61017421 61018019 -59266293 - Lx6 LINE L1 0 7460 6864 3 1050 3428 143 49 12 chr13 61019309 61019988 -59264324 - L1_Mur1 LINE L1 -2010 3876 3173 3 1050 2326 139 15 19 chr13 61019997 61020215 -59264097 + Lx2 LINE L1 6581 6799 -198 3 1050 3246 38 8 8 chr13 61020215 61020611 -59263701 - MTA_Mm LTR MaLR 0 396 1 3 1050 2326 139 15 19 chr13 61020611 61020803 -59263509 + Lx2 LINE L1 6800 6989 -8 3 1050 6592 46 4 0 chr13 61020819 61021662 -59262650 - L1Md_F3 LINE L1 0 5883 5038 3 1050 1280 13 0 0 chr13 61021661 61021813 -59262499 + L1Md_F3 LINE L1 5878 6029 -555 3 1050 850 54 0 15 chr13 61021813 61021945 -59262367 + L1Md_F3 LINE L1 6453 6582 -2 3 1050 304 272 19 0 chr13 61021977 61022080 -59262232 + L1_Mur3 LINE L1 1015 1119 -6593 4 1050 3026 176 8 58 chr13 61022121 61023385 -59260927 + L1VL4 LINE L1 142 1333 -2226 4 1050 8898 124 3 9 chr13 61023383 61024861 -59259451 + L1_Mm LINE L1 3363 4830 -1053 4 1050 11099 56 0 4 chr13 61025189 61027377 -59256935 - L1Md_F2 LINE L1 0 6582 4403 4 1050 201 39 0 0 chr13 61027516 61027542 -59256770 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 4 1050 406 333 57 24 chr13 61027837 61028049 -59256263 - MLT1D LTR MaLR -285 220 2 4 1050 5459 129 32 5 chr13 61028219 61028503 -59255809 + L1_Mus3 LINE L1 4817 5097 -786 4 1050 1771 102 0 19 chr13 61028503 61028774 -59255538 + L1Md_F2 LINE L1 6316 6581 -1 4 1050 5459 109 78 56 chr13 61028774 61029446 -59254866 + L1_Mus3 LINE L1 5098 5821 -817 4 1050 476 103 0 0 chr13 61029446 61029514 -59254798 + U4 snRNA snRNA 1 68 -77 4 1050 5459 109 78 56 chr13 61029514 61030260 -59254052 + L1_Mus3 LINE L1 5822 6628 -10 4 1050 275 329 39 27 chr13 61030675 61031009 -59253303 + L1MA4 LINE L1 4891 5228 -915 4 1050 730 255 106 74 chr13 61031098 61031735 -59252577 - Lx9 LINE L1 -1117 6527 5770 5 1050 3165 254 34 18 chr13 61031738 61032683 -59251629 + Lx9 LINE L1 6540 7499 -145 5 1050 26 30 0 0 chr13 61032781 61032814 -59251498 + AT_rich Low_complexity Low_complexity 1 33 0 5 1050 399 285 137 32 chr13 61032850 61033300 -59251012 + L1MA4 LINE L1 5343 5889 -411 4 1050 705 24 0 0 chr13 61033352 61033435 -59250877 + (TG)n Simple_repeat Simple_repeat 1 83 0 5 1050 276 263 150 40 chr13 61033863 61034027 -59250285 + MTE-int LTR MaLR 1303 1503 -77 5 1050 330 227 44 28 chr13 61035114 61035242 -59249070 + RLTR13D3 LTR ERVK 983 1072 -42 5 1050 2746 68 11 8 chr13 61035543 61035911 -59248401 - L1_Mus1 LINE L1 -1 6566 6198 5 1050 1628 79 0 0 chr13 61035912 61036141 -59248171 + L1Md_F2 LINE L1 5863 6091 -491 5 1050 481 253 122 0 chr13 61037460 61037689 -59246623 + Lx9 LINE L1 7382 7638 -6 5 1050 1267 203 33 12 chr13 61039060 61039394 -59244918 + L1_Mur3 LINE L1 2674 3014 -2866 5 1050 2346 131 10 37 chr13 61039395 61039799 -59244513 + RLTR31B_Mm LTR ERVK 3 395 -162 5 1050 23 33 0 0 chr13 61039850 61039880 -59244432 + AT_rich Low_complexity Low_complexity 1 30 0 6 1050 839 209 157 7 chr13 61039937 61040211 -59244101 + Lx9 LINE L1 7325 7639 -5 6 1050 24 0 0 0 chr13 61040642 61040666 -59243646 + AT_rich Low_complexity Low_complexity 1 24 0 6 1050 1442 59 0 0 chr13 61042147 61042333 -59241979 + L1Md_A LINE L1 6397 6582 0 6 1050 182 246 86 71 chr13 61042778 61042848 -59241464 - MIRb SINE MIR -146 122 52 6 1050 547 304 74 10 chr13 61043763 61043966 -59240346 + B3 SINE B2 1 216 0 6 1050 1884 181 6 6 chr13 61043979 61044324 -59239988 + Lx3B LINE L1 6623 6967 -6 6 1050 189 0 0 0 chr13 61044341 61044362 -59239950 + (CTA)n Simple_repeat Simple_repeat 1 21 0 6 1050 297 128 0 0 chr13 61044362 61044409 -59239903 + (ATG)n Simple_repeat Simple_repeat 2 48 0 6 1050 1440 304 45 0 chr13 61044853 61045278 -59239034 + Lx6 LINE L1 7014 7457 -3 6 1050 576 77 0 0 chr13 61045327 61045405 -59238907 + (TA)n Simple_repeat Simple_repeat 1 78 0 7 1050 471 303 50 37 chr13 61045710 61045871 -59238441 + RSINE1 SINE B4 3 165 0 7 1050 297 0 0 0 chr13 61045890 61045923 -59238389 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1050 1047 264 47 16 chr13 61045923 61046181 -59238131 + ORR1D2 LTR MaLR 105 370 0 7 1050 584 271 93 87 chr13 61046468 61046749 -59237563 + MER31A LTR ERV1 25 326 -140 7 1050 244 387 33 38 chr13 61047218 61047430 -59236882 - RMER15 LTR ERVL -56 519 309 7 1050 249 210 45 75 chr13 61047450 61047517 -59236795 + RMER15 LTR ERVL 84 148 -427 7 1050 3339 232 46 18 chr13 61047569 61048420 -59235892 + Lx6 LINE L1 6198 7072 -388 7 1050 2222 103 125 0 chr13 61048438 61048798 -59235514 - IAPLTR2a LTR ERVK -6 405 1 7 1050 6314 56 12 7 chr13 61048800 61049646 -59234666 - IAPEz-int LTR ERVK -2 6479 5630 7 1050 22907 48 23 17 chr13 61049632 61052676 -59231636 - IAPEz-int LTR ERVK -3405 3076 17 7 1050 310 91 0 83 chr13 61052687 61052747 -59231565 - IAPEz-int LTR ERVK -1930 57 3 7 1050 2222 103 125 0 chr13 61052757 61053117 -59231195 - IAPLTR2a LTR ERVK -6 405 1 7 1050 1541 247 33 3 chr13 61053119 61053485 -59230827 + Lx6 LINE L1 7079 7455 -5 7 1050 1407 274 72 71 chr13 61053866 61054612 -59229700 + Lx9 LINE L1 6768 7514 -130 7 1050 1765 182 21 67 chr13 61054801 61055236 -59229076 + RMER1B Other Other 380 922 -144 8 1050 414 0 0 0 chr13 61055752 61055798 -59228514 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 1050 502 320 8 0 chr13 61055798 61055920 -59228392 - RSINE1 SINE B4 -26 139 17 8 1050 1689 277 105 30 chr13 61056133 61056387 -59227925 - L1_Mur3 LINE L1 -1100 4780 4526 8 1050 2059 112 39 60 chr13 61056387 61056721 -59227591 + ORR1A2 LTR MaLR 1 327 0 8 1050 1689 277 105 30 chr13 61056721 61057483 -59226829 - L1_Mur3 LINE L1 -1355 4525 3687 8 1050 387 0 0 0 chr13 61057502 61057545 -59226767 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1050 26 0 0 0 chr13 61057629 61057655 -59226657 + AT_rich Low_complexity Low_complexity 1 26 0 8 1050 235 261 69 43 chr13 61057655 61057771 -59226541 - Lx8 LINE L1 -2 7471 7353 8 1050 186 103 0 0 chr13 61058716 61058745 -59225567 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 8 1050 4261 143 68 3 chr13 61058835 61059541 -59224771 - Lx2B LINE L1 -5 6995 6244 8 1050 5757 118 88 10 chr13 61060057 61061189 -59223123 + Lx4A LINE L1 5479 6695 -363 9 1050 671 78 17 9 chr13 61061190 61061306 -59223006 + L1_Mus3 LINE L1 6522 6638 0 9 1050 424 329 127 0 chr13 61061574 61061857 -59222455 + Lx8 LINE L1 6292 6610 -863 9 1050 566 326 42 30 chr13 61062184 61062421 -59221891 + MLT1E3 LTR MaLR 343 582 -42 9 1050 286 139 179 77 chr13 61062426 61062543 -59221769 - RCHARR1 DNA MER1_type -123 851 723 9 1050 441 275 41 16 chr13 61062583 61062705 -59221607 + RSINE1 SINE B4 41 165 0 9 1050 752 74 9 0 chr13 61062860 61062968 -59221344 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 9 1050 258 32 0 0 chr13 61062968 61062999 -59221313 + (TC)n Simple_repeat Simple_repeat 1 31 0 9 1050 852 318 48 39 chr13 61062999 61063461 -59220851 - RCHARR1 DNA MER1_type -448 526 61 9 1050 219 69 0 0 chr13 61063565 61063594 -59220718 + (ATG)n Simple_repeat Simple_repeat 2 30 0 9 1050 276 53 0 0 chr13 61063937 61063975 -59220337 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 9 1050 1049 210 4 30 chr13 61064950 61065181 -59219131 + URR1B DNA MER1_type 1 225 0 1 1050 405 0 0 0 chr13 61065822 61065867 -59218445 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1050 185 94 0 30 chr13 61065867 61065899 -59218413 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1050 22 70 0 0 chr13 61065958 61066001 -59218311 + AT_rich Low_complexity Low_complexity 1 43 0 1 1050 6715 78 14 9 chr13 61066022 61066416 -59217896 - L1_Mus2 LINE L1 0 6566 6174 1 1050 522 31 0 0 chr13 61066416 61066480 -59217832 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 1050 9907 96 6 12 chr13 61066480 61068307 -59216005 - L1_Mus2 LINE L1 -393 6173 4359 1 1050 28979 86 5 15 chr13 61068307 61073438 -59210874 - L1Md_F2 LINE L1 -2 6580 1506 1 1050 423 38 0 0 chr13 61074078 61074131 -59210181 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1050 365 58 0 19 chr13 61074131 61074183 -59210129 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1050 29 47 0 0 chr13 61074242 61074285 -59210027 + AT_rich Low_complexity Low_complexity 1 43 0 1 1050 6655 82 14 9 chr13 61074306 61074700 -59209612 - L1_Mus2 LINE L1 0 6566 6174 1 1050 522 31 0 0 chr13 61074700 61074764 -59209548 + (GA)n Simple_repeat Simple_repeat 2 65 0 1 1050 6655 93 9 7 chr13 61074764 61075771 -59208541 - L1_Mus2 LINE L1 -393 6173 5162 1 131 39380 5 1 0 chr13 61075764 61082138 -59202174 - L1Md_A LINE L1 0 6582 204 1 1051 5209 107 1 20 chr13 61082128 61082967 -59201345 - L1_Mus2 LINE L1 -702 5181 4359 1 1051 29309 86 5 8 chr13 61082967 61088056 -59196256 - L1Md_F2 LINE L1 -1 6581 1506 1 1051 396 0 0 0 chr13 61088694 61088738 -59195574 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1051 548 29 0 14 chr13 61088739 61088810 -59195502 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 1051 29 47 0 0 chr13 61088871 61088914 -59195398 + AT_rich Low_complexity Low_complexity 1 43 0 1 1051 9935 92 4 19 chr13 61088935 61091182 -59193130 - L1_Mus2 LINE L1 0 6566 4359 1 1051 30895 98 8 12 chr13 61091182 61097385 -59186927 - L1Md_F2 LINE L1 -1 6581 410 1 1051 436 269 18 36 chr13 61097386 61097552 -59186760 - L1_Mur2 LINE L1 -6035 677 515 1 1051 360 0 0 0 chr13 61097572 61097612 -59186700 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1051 2185 260 76 20 chr13 61097893 61099057 -59185255 - L1_Mur3 LINE L1 -4345 1532 305 1 1051 420 20 0 0 chr13 61099201 61099250 -59185062 + (TTCC)n Simple_repeat Simple_repeat 1 49 0 1 1051 1471 220 59 21 chr13 61099277 61099666 -59184646 - Lx9 LINE L1 -481 7163 6760 1 1051 399 231 154 0 chr13 61099644 61099761 -59184551 + Lx9 LINE L1 6497 6631 -1013 1 1051 23 33 0 0 chr13 61099766 61099796 -59184516 + AT_rich Low_complexity Low_complexity 1 30 0 1 1051 317 249 62 17 chr13 61099814 61099990 -59184322 - L1_Mur3 LINE L1 -2552 3328 3145 1 1051 339 349 28 28 chr13 61100175 61100355 -59183957 - Lx8 LINE L1 -200 7273 7094 1 1051 255 61 0 0 chr13 61100935 61100968 -59183344 + (CATA)n Simple_repeat Simple_repeat 2 34 0 1 1051 432 0 0 0 chr13 61101483 61101531 -59182781 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1051 336 379 53 43 chr13 61102278 61102485 -59181827 + B4A SINE B4 83 291 -1 1 1051 258 286 0 0 chr13 61102592 61102648 -59181664 - B3 SINE B2 -160 56 1 1 1051 195 184 0 0 chr13 61102957 61102995 -59181317 + (TA)n Simple_repeat Simple_repeat 2 39 0 1 1051 702 268 80 35 chr13 61103055 61103368 -59180944 + RLTR15 LTR ERVK 1 327 -32 1 1051 324 0 0 0 chr13 61105249 61105285 -59179027 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1051 198 0 0 0 chr13 61106060 61106082 -59178230 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1051 482 112 41 27 chr13 61106240 61106387 -59177925 + A-rich Low_complexity Low_complexity 2 150 0 1 1051 251 250 0 18 chr13 61108203 61108260 -59176052 + MLT1A1 LTR MaLR 45 100 -308 1 1051 3810 39 7 4 chr13 61110348 61110812 -59173500 + L1Md_F3 LINE L1 6108 6572 -12 1 1051 444 240 19 19 chr13 61113132 61113238 -59171074 - MTC-int LTR MaLR -1135 123 18 1 1051 492 308 55 0 chr13 61113236 61113382 -59170930 - MTD LTR MaLR -218 201 48 1 1051 225 300 21 32 chr13 61113326 61113419 -59170893 - MT2B LTR ERVL -509 92 1 1 1051 3186 139 19 71 chr13 61113503 61113933 -59170379 + L1_Mur2 LINE L1 4931 5360 -517 1 1051 1267 20 7 0 chr13 61113933 61114079 -59170233 + B1_Mus1 SINE Alu 2 148 0 1 1051 3186 139 19 71 chr13 61114079 61114298 -59170014 + L1_Mur2 LINE L1 5361 5546 -331 1 1051 334 219 0 144 chr13 61114367 61114548 -59169764 - Lx7 LINE L1 -97 7599 7445 1 1051 506 266 78 16 chr13 61114581 61114837 -59169475 - Lx7 LINE L1 -1478 6218 5947 1 1051 2164 19 0 0 chr13 61114851 61115107 -59169205 - ORR1A0 LTR MaLR -51 295 40 1 1051 3060 194 66 3 chr13 61115117 61115905 -59168407 - Lx7 LINE L1 -1755 5941 5102 1 1051 270 0 0 0 chr13 61115912 61115942 -59168370 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1 1051 747 226 31 5 chr13 61115942 61116138 -59168174 - Lx5 LINE L1 -14 7036 6836 1 1051 1414 209 142 8 chr13 61116133 61116500 -59167812 - Lx5 LINE L1 -558 6492 6077 1 1051 1093 227 66 42 chr13 61116500 61116881 -59167431 - Lx7 LINE L1 -3347 2533 2144 1 1051 252 224 0 0 chr13 61117712 61117770 -59166542 + L1_Mur1 LINE L1 694 751 -6231 1 1051 2100 218 57 53 chr13 61119736 61120418 -59163894 + RMER6C LTR ERVK 3 687 -3 1 1051 307 237 20 51 chr13 61121287 61121385 -59162927 - MTC-int LTR MaLR -1123 135 41 1 1051 1069 134 47 0 chr13 61121386 61121557 -59162755 + B2_Mm2 SINE B2 5 183 -12 1 1051 506 214 30 29 chr13 61121638 61121804 -59162508 - L1_Rod LINE L1 -4218 1629 1456 1 1051 251 255 29 0 chr13 61121814 61121916 -59162396 + T-rich Low_complexity Low_complexity 1 105 0 1 1051 246 238 15 31 chr13 61121916 61121981 -59162331 - B1_Mur3 SINE Alu -2 147 84 1 1051 254 113 274 0 chr13 61122131 61122193 -59162119 - URR1B DNA MER1_type -5 220 142 1 1051 6301 126 54 30 chr13 61122194 61122278 -59162034 + Lx3A LINE L1 5827 5910 -1071 1 1051 465 19 0 0 chr13 61122278 61122332 -59161980 + (CCAA)n Simple_repeat Simple_repeat 2 55 0 1 1051 6301 126 54 30 chr13 61122332 61123264 -59161048 + Lx3A LINE L1 5911 6856 -125 1 1051 204 40 0 0 chr13 61123264 61123289 -59161023 + (TGGGGG)n Simple_repeat Simple_repeat 3 27 0 1 1051 6301 126 54 30 chr13 61123289 61123388 -59160924 + Lx3A LINE L1 6857 6969 -12 1 1051 432 138 12 0 chr13 61123390 61123470 -59160842 + L1_Mur1 LINE L1 5375 5455 -431 1 1051 1714 132 88 136 chr13 61123481 61123980 -59160332 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1051 396 0 0 0 chr13 61123999 61124043 -59160269 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 1 1051 707 215 12 48 chr13 61124058 61124224 -59160088 - URR1B DNA MER1_type -66 159 1 1 1051 313 310 58 40 chr13 61124404 61124629 -59159683 - L1_Rod LINE L1 -362 5485 5257 1 1051 6651 78 77 8 chr13 61124627 61125349 -59158963 - L1_Mus3 LINE L1 -3 6635 5849 1 1051 3181 34 31 0 chr13 61125349 61125733 -59158579 - MTA_Mm LTR MaLR 0 396 1 1 1051 6651 140 4 14 chr13 61125733 61126861 -59157451 - L1_Mus3 LINE L1 -35 5848 4726 1 1051 6403 33 4 3 chr13 61126861 61127623 -59156689 - L1Md_F2 LINE L1 -14 6568 5806 1 1051 7591 55 0 0 chr13 61127623 61128996 -59155316 + L1Md_F3 LINE L1 5189 6561 -23 1 1051 267 333 0 0 chr13 61129092 61129164 -59155148 + RMER1C Other Other 458 529 -813 1 1051 6951 88 2 3 chr13 61129251 61130404 -59153908 - L1_Mus2 LINE L1 0 6566 5415 1 1051 343 291 60 0 chr13 61130400 61130533 -59153779 + RMER1A Other Other 328 448 -582 1 1051 1215 192 81 14 chr13 61130597 61130882 -59153430 + RMER1A Other Other 697 1000 -30 1 1051 452 149 0 0 chr13 61130882 61130976 -59153336 + L1_Mus3 LINE L1 6539 6632 -6 1 1051 11389 120 21 12 chr13 61130993 61133912 -59150400 + Lx3A LINE L1 4023 6966 -15 1 1051 3361 68 5 2 chr13 61133912 61134351 -59149961 + L1_Mus1 LINE L1 6128 6567 0 1 1051 7820 141 23 22 chr13 61134351 61134365 -59149947 + Lx3A LINE L1 6967 6978 -3 1 1051 22 0 0 0 chr13 61134375 61134397 -59149915 + AT_rich Low_complexity Low_complexity 1 22 0 1 1051 874 259 77 17 chr13 61134509 61134913 -59149399 - Lx7 LINE L1 -1489 6207 5780 1 1051 836 225 52 139 chr13 61134983 61135195 -59149117 - L1_Mur3 LINE L1 -1863 4014 3801 1 1051 1130 89 6 0 chr13 61135195 61135364 -59148948 + (TTC)n Simple_repeat Simple_repeat 2 171 0 1 1051 836 225 52 139 chr13 61135364 61135703 -59148609 - L1_Mur3 LINE L1 -2077 3800 3511 1 1051 25 0 0 0 chr13 61135709 61135734 -59148578 + AT_rich Low_complexity Low_complexity 1 25 0 1 1051 761 234 50 0 chr13 61135734 61136029 -59148283 - L1_Mur3 LINE L1 -4518 1362 1041 1 1051 278 394 44 22 chr13 61137086 61137312 -59147000 + B4A SINE B4 56 286 -6 1 1051 230 245 19 0 chr13 61137444 61137497 -59146815 - B3A SINE B2 -142 56 3 1 1051 437 0 19 0 chr13 61137785 61137838 -59146474 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1051 821 70 31 0 chr13 61137914 61138073 -59146239 - L1Md_F3 LINE L1 0 6584 6451 1 1051 204 105 0 0 chr13 61138073 61138080 -59146232 + (TTTTTA)n Simple_repeat Simple_repeat 6 12 0 1 1051 426 39 0 0 chr13 61139426 61139478 -59144834 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1051 762 171 20 33 chr13 61139734 61139885 -59144427 + B1_Mur4 SINE Alu 1 149 -1 1 1051 783 122 0 21 chr13 61139953 61140096 -59144216 + (GAA)n Simple_repeat Simple_repeat 3 142 0 1 1051 4881 72 23 3 chr13 61142342 61142995 -59141317 - L1_Mus1 LINE L1 -1 6566 5901 1 1051 4115 78 7 0 chr13 61142995 61143569 -59140743 + L1_Mus1 LINE L1 5306 5883 0 1 1051 3310 64 0 0 chr13 61144246 61144683 -59139629 + L1Md_F2 LINE L1 5150 5586 -297 1 1051 7910 55 8 3 chr13 61144683 61145673 -59138639 + L1Md_F2 LINE L1 5587 6581 -1 1 1051 977 93 35 7 chr13 61145916 61146057 -59138255 - B1_Mm SINE Alu -1 146 2 1 1051 933 9 0 0 chr13 61146057 61146163 -59138149 + (GAAA)n Simple_repeat Simple_repeat 2 107 0 1 1051 267 357 74 17 chr13 61146480 61146711 -59137601 - Lx7 LINE L1 -412 7284 7041 1 1051 1572 225 9 0 chr13 61146709 61147056 -59137256 - Lx4B LINE L1 -365 6693 6344 1 1051 6450 120 27 4 chr13 61147053 61148342 -59135970 + L1_Mus3 LINE L1 5309 6628 -10 1 1051 399 132 0 0 chr13 61148344 61148412 -59135900 - Lx4B LINE L1 -715 6343 6276 1 1051 5351 205 40 11 chr13 61148410 61149690 -59134622 + Lx3C LINE L1 5656 6972 -4 1 1051 741 305 137 22 chr13 61151637 61152002 -59132310 - MTD LTR MaLR -12 407 1 1 1051 862 258 120 44 chr13 61152031 61152478 -59131834 - L1_Rod LINE L1 -3923 1924 1425 1 1051 203 0 0 36 chr13 61152478 61152506 -59131806 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1051 862 258 120 44 chr13 61152506 61152606 -59131706 - L1_Rod LINE L1 -4423 1424 1335 1 1051 1678 248 42 0 chr13 61152866 61153270 -59131042 - MTC LTR MaLR 0 421 1 1 1051 3582 220 161 7 chr13 61153270 61154360 -59129952 - MTC-int LTR MaLR 0 1258 2 1 1051 234 0 0 0 chr13 61154421 61154447 -59129865 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1051 2746 236 122 14 chr13 61154447 61155450 -59128862 + L1_Mur3 LINE L1 4165 5275 -605 1 1051 1071 122 0 0 chr13 61155453 61155601 -59128711 + B1_Mus1 SINE Alu 1 148 0 1 1051 182 128 26 0 chr13 61155604 61155643 -59128669 + A-rich Low_complexity Low_complexity 3 42 0 2 1051 375 145 0 0 chr13 61155692 61155761 -59128551 + (TA)n Simple_repeat Simple_repeat 1 69 0 2 1051 1442 126 26 53 chr13 61155806 61156108 -59128204 - L1_Mur3 LINE L1 -1756 4124 3831 2 1051 2420 189 21 2 chr13 61156118 61156632 -59127680 - L1_Mur2 LINE L1 -143 5734 5211 2 1051 664 136 24 8 chr13 61156632 61156758 -59127554 + Lx2A LINE L1 6874 7001 -7 2 1051 4676 208 76 39 chr13 61156761 61156962 -59127350 - L1_Mur3 LINE L1 -2190 3690 3475 2 1051 215 31 31 0 chr13 61156962 61156994 -59127318 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 1051 4676 208 76 39 chr13 61156994 61158313 -59125999 - L1_Mur3 LINE L1 -2406 3474 2114 2 1051 5126 186 40 25 chr13 61159889 61161046 -59123266 - L1_Mur2 LINE L1 -1058 4819 3654 2 1051 465 19 0 0 chr13 61161046 61161100 -59123212 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1051 5126 186 40 25 chr13 61161100 61161189 -59123123 - L1_Mur2 LINE L1 -2224 3653 3555 2 1051 11327 138 245 7 chr13 61161202 61163658 -59120654 - L1_Mus1 LINE L1 0 6567 2796 2 1051 213 39 0 0 chr13 61163658 61163684 -59120628 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1051 11327 155 25 13 chr13 61163684 61165617 -59118695 - L1_Mus1 LINE L1 -1114 2800 857 2 1051 2809 55 0 0 chr13 61167627 61168020 -59116292 - L1_Mus1 LINE L1 -619 5948 5556 2 1051 387 278 26 0 chr13 61168236 61168351 -59115961 - MTD-int LTR MaLR -1140 118 1 2 1051 597 326 120 20 chr13 61168382 61168733 -59115579 - MTD LTR MaLR -33 386 1 2 1051 523 252 170 18 chr13 61168838 61169237 -59115075 - L1_Rod LINE L1 -4053 1794 1335 2 1051 889 208 62 8 chr13 61169295 61169538 -59114774 - L1_Mur2 LINE L1 -3615 2265 2010 2 1051 201 250 0 0 chr13 61169538 61169578 -59114734 + (CGTG)n Simple_repeat Simple_repeat 2 41 0 2 1051 449 194 0 51 chr13 61169621 61169763 -59114549 - L1_Mur2 LINE L1 -4080 1797 1665 2 1051 224 157 59 0 chr13 61169763 61169814 -59114498 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 2 1051 643 165 136 47 chr13 61169823 61170014 -59114298 - Lx3_Mus LINE L1 0 7009 6802 2 1051 2289 90 0 12 chr13 61171047 61171374 -59112938 - L1Md_F2 LINE L1 0 6582 6260 2 1051 3019 66 2 0 chr13 61171376 61171798 -59112514 + L1_Mm LINE L1 4074 4496 -1387 2 1051 541 281 36 7 chr13 61171994 61172134 -59112178 + RSINE1 SINE B4 3 146 -19 2 1051 393 294 82 43 chr13 61172157 61172388 -59111924 + L1M5 LINE L1 5357 5596 -528 2 1051 673 243 14 0 chr13 61172544 61172684 -59111628 - B1_Mur4 SINE Alu -8 142 1 2 1051 180 0 0 0 chr13 61173824 61173844 -59110468 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1051 6309 8 3 0 chr13 61175604 61176306 -59108006 - L1Md_T LINE L1 0 6582 5879 2 1051 607 269 24 9 chr13 61177496 61177706 -59106606 + Lx4B LINE L1 6190 6402 -656 2 1051 2558 161 56 0 chr13 61177703 61178182 -59106130 - Lx2 LINE L1 -165 6832 6327 2 1051 458 259 50 12 chr13 61181785 61181945 -59102367 + URR1A DNA MER1_type 61 226 0 2 1051 560 280 24 10 chr13 61183070 61183279 -59101033 + Lx4B LINE L1 6191 6402 -656 2 1051 2610 158 54 0 chr13 61183276 61183756 -59100556 - Lx2 LINE L1 -165 6832 6327 2 1051 471 259 50 12 chr13 61187362 61187522 -59096790 + URR1A DNA MER1_type 61 226 0 2 1051 596 271 24 10 chr13 61188648 61188857 -59095455 + Lx4B LINE L1 6191 6402 -656 2 1051 2594 160 52 0 chr13 61188854 61189335 -59094977 - Lx2 LINE L1 -165 6832 6327 2 1051 458 259 50 12 chr13 61192940 61193100 -59091212 + URR1A DNA MER1_type 61 226 0 2 1051 605 264 24 9 chr13 61194224 61194434 -59089878 + Lx4B LINE L1 6190 6402 -656 2 1051 2538 164 52 0 chr13 61194431 61194912 -59089400 - Lx2 LINE L1 -165 6832 6327 2 1051 1730 61 0 0 chr13 61195833 61196079 -59088233 + L1_Mm LINE L1 1306 1551 -4332 2 1051 445 256 37 12 chr13 61198758 61198920 -59085392 + URR1A DNA MER1_type 61 226 0 2 1051 541 288 24 9 chr13 61200046 61200256 -59084056 + Lx4B LINE L1 6190 6402 -656 2 1051 2640 156 52 0 chr13 61200253 61200734 -59083578 - Lx2 LINE L1 -165 6832 6327 2 1051 1942 102 28 22 chr13 61203477 61203797 -59080515 + RLTRETN_Mm LTR ERVK 1 322 0 2 1051 13653 28 1 7 chr13 61203797 61205468 -59078844 + ETnERV-int LTR ERVK 1 1660 -1654 2 1051 3345 315 38 29 chr13 61205701 61207478 -59076834 + ETnERV-int LTR ERVK 1790 3582 -2585 2 131 38691 16 3 6 chr13 61207489 61213877 -59070435 - L1Md_A LINE L1 -2 6580 215 2 1052 6969 137 6 1 chr13 61213878 61214928 -59069384 + ETnERV-int LTR ERVK 4352 5406 -2000 2 1052 13087 55 8 14 chr13 61214927 61216805 -59067507 + ETnERV-int LTR ERVK 1658 3314 0 2 1052 1742 125 31 22 chr13 61216805 61217124 -59067188 + RLTRETN_Mm LTR ERVK 1 322 0 2 1052 451 247 50 19 chr13 61217995 61218156 -59066156 + URR1A DNA MER1_type 61 226 0 2 1052 429 272 33 19 chr13 61219283 61219493 -59064819 + Lx4B LINE L1 6190 6402 -656 2 1052 2498 175 52 0 chr13 61219490 61219971 -59064341 - Lx2 LINE L1 -165 6832 6327 2 1052 2197 218 9 4 chr13 61223484 61224033 -59060279 - L1_Mur2 LINE L1 -188 5689 5138 2 1052 1620 74 4 0 chr13 61224663 61224892 -59059420 + L1_Mm LINE L1 4944 5173 -710 2 1052 344 0 0 0 chr13 61224925 61224968 -59059344 + L1Md_A LINE L1 5933 5975 -607 2 1052 282 0 0 0 chr13 61224964 61224999 -59059313 + L1Md_A LINE L1 5932 5966 -616 2 1052 420 20 0 0 chr13 61225497 61225546 -59058766 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 2 1052 5116 145 57 6 chr13 61225547 61226453 -59057859 - Lx3A LINE L1 -11 6970 6018 2 1052 3499 91 99 11 chr13 61226453 61227082 -59057230 + Lx3A LINE L1 5295 5962 -1019 2 1052 537 16 0 0 chr13 61227269 61227331 -59056981 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1052 3537 207 37 36 chr13 61228824 61229840 -59054472 - L1_Mur3 LINE L1 -1884 3996 2980 2 1052 310 267 33 84 chr13 61229851 61230069 -59054243 - RMER12 LTR ERVK 0 1322 991 2 1052 315 0 0 0 chr13 61230071 61230106 -59054206 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1052 603 92 0 0 chr13 61230165 61230252 -59054060 + (TA)n Simple_repeat Simple_repeat 1 87 0 2 1052 324 0 0 0 chr13 61230254 61230290 -59054022 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1052 358 183 28 0 chr13 61230293 61230364 -59053948 - RMER12 LTR ERVK -539 783 711 2 1052 7159 72 4 3 chr13 61230382 61231359 -59052953 - L1_Mus1 LINE L1 0 6567 5590 2 1052 453 133 0 30 chr13 61231380 61231481 -59052831 - L1Md_F2 LINE L1 0 6582 6485 2 1052 1904 167 10 0 chr13 61231481 61231787 -59052525 + RLTR27 LTR ERVK 1 309 0 2 1052 329 102 85 0 chr13 61231809 61231868 -59052444 + MMERVK10C-int LTR ERVK 204 267 -7314 2 1052 410 192 70 62 chr13 61231957 61232085 -59052227 + MMERVK10C-int LTR ERVK 724 852 -1135 2 1052 241 280 20 20 chr13 61232085 61232187 -59052125 + A-rich Low_complexity Low_complexity 3 104 0 2 1052 6013 303 40 44 chr13 61232486 61236685 -59047627 + MMERVK10C-int LTR ERVK 1197 5382 -2199 2 1052 1371 158 4 23 chr13 61236828 61237094 -59047218 + MMERVK10C-int LTR ERVK 7321 7581 0 2 1052 1761 169 14 0 chr13 61237094 61237384 -59046928 + RLTR27 LTR ERVK 1 294 -15 2 1052 1981 152 3 6 chr13 61237384 61237696 -59046616 - RLTR10E LTR ERVK 0 311 1 2 1052 3383 176 14 16 chr13 61237696 61238335 -59045977 - MMERVK10C-int LTR ERVK 0 7680 7043 2 1052 4041 75 18 4 chr13 61238332 61238893 -59045419 - MMERVK10C-int LTR ERVK -1252 6329 5761 2 1052 5999 106 1 8 chr13 61238884 61239738 -59044574 - MMERVK10C-int LTR ERVK -1939 5642 4795 2 1052 662 129 0 0 chr13 61239729 61239830 -59044482 - MMERVK10C-int LTR ERVK -3356 4225 4125 2 1052 2395 114 0 0 chr13 61239829 61240197 -59044115 - MMERVK10C-int LTR ERVK -3662 3919 3552 2 1052 1435 121 86 0 chr13 61240193 61240425 -59043887 - MMERVK10C-int LTR ERVK -4515 3066 2815 2 1052 3633 106 21 14 chr13 61240449 61241006 -59043306 - MMERVK10C-int LTR ERVK -5136 2445 1885 2 1052 342 210 123 0 chr13 61240997 61241078 -59043234 - MMERVK10C-int LTR ERVK -5109 1028 938 2 1052 928 219 209 37 chr13 61241083 61241457 -59042855 - MMERVK10C-int LTR ERVK -4587 819 382 2 1052 1914 182 58 17 chr13 61241456 61241522 -59042790 - MMERVK10C-int LTR ERVK -6711 870 807 2 1052 180 77 0 0 chr13 61241522 61241548 -59042764 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2 1052 1914 182 58 17 chr13 61241548 61241894 -59042418 - MMERVK10C-int LTR ERVK -6775 806 441 2 1052 1176 158 0 10 chr13 61241991 61242195 -59042117 - MMERVK10C-int LTR ERVK -7155 426 225 2 1052 248 244 0 0 chr13 61242195 61242240 -59042072 - RLTR27 LTR ERVK -34 275 231 2 1052 674 89 20 0 chr13 61242240 61242341 -59041971 - MMERVK10C-int LTR ERVK -7478 103 1 2 1052 1913 159 6 6 chr13 61242341 61242652 -59041660 - RLTR10E LTR ERVK 0 311 1 2 1052 10037 80 7 3 chr13 61242672 61244676 -59039636 - L1Md_F2 LINE L1 -91 6491 4481 2 1052 9924 122 51 5 chr13 61244676 61246375 -59037937 - L1_Mm LINE L1 -323 5560 3785 2 1052 1175 288 78 21 chr13 61246393 61246895 -59037417 - RMER12 LTR ERVK -764 558 1 2 1052 277 91 0 0 chr13 61246901 61246945 -59037367 - L1_Mur3 LINE L1 -2935 2945 2902 2 1052 3528 169 15 2 chr13 61246953 61247558 -59036754 - Lx2B LINE L1 -1 6999 6387 2 1052 246 279 49 49 chr13 61247833 61247976 -59036336 - MMSAT4 Satellite Satellite 0 168 26 2 1052 414 0 0 0 chr13 61248036 61248082 -59036230 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1052 311 295 43 42 chr13 61248571 61248946 -59035366 - MurSatRep1 Unknown Unknown -88 2049 1843 2 1052 380 284 18 18 chr13 61248745 61248981 -59035331 - MMSAT4 Satellite Satellite 0 236 1 2 1052 3396 158 56 25 chr13 61249025 61250444 -59033868 + L1_Mur1 LINE L1 3 1749 -4137 2 1052 372 113 0 0 chr13 61250442 61250495 -59033817 + Lx3A LINE L1 5608 5660 -1321 2 1052 388 290 30 41 chr13 61250489 61250658 -59033654 - Lx7 LINE L1 -1029 6667 6501 2 1052 881 159 53 0 chr13 61250663 61250833 -59033479 + Lx3_Mus LINE L1 6828 7006 -3 2 1052 376 134 0 0 chr13 61250973 61251040 -59033272 - MurSatRep1 Unknown Unknown -1128 1009 943 2 1052 737 171 0 0 chr13 61251036 61251165 -59033147 - MurSatRep1 Unknown Unknown -1397 740 612 2 1052 703 169 0 8 chr13 61251287 61251418 -59032894 - L1_Mur3 LINE L1 -626 5251 5122 2 1052 1881 233 17 122 chr13 61251450 61252325 -59031987 - L1_Mur3 LINE L1 -2684 3196 2414 2 1052 707 77 240 33 chr13 61252336 61252457 -59031855 + B1_Mus2 SINE Alu 2 147 0 2 1052 1241 231 12 34 chr13 61252515 61252931 -59031381 - L1_Mur3 LINE L1 -3892 1988 1582 2 1052 32510 79 5 1 chr13 61252958 61259405 -59024907 - L1Md_F2 LINE L1 -11 6571 98 2 1052 1097 197 18 23 chr13 61259393 61259706 -59024606 - L1VL1 LINE L1 -5973 751 217 2 1052 1035 244 26 13 chr13 61259710 61260092 -59024220 - L1_Mur3 LINE L1 -4291 1589 1203 2 1052 354 366 62 23 chr13 61261331 61261507 -59022805 + B4A SINE B4 109 291 -1 2 1052 236 28 0 53 chr13 61261601 61261639 -59022673 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 2 1052 271 208 0 0 chr13 61261697 61261745 -59022567 - B3 SINE B2 -164 52 5 2 1052 626 37 12 0 chr13 61264874 61264955 -59019357 + (GAGAA)n Simple_repeat Simple_repeat 4 85 0 2 1052 768 136 0 0 chr13 61265312 61265437 -59018875 + (TTCC)n Simple_repeat Simple_repeat 2 126 0 2 1052 318 100 0 0 chr13 61266908 61266968 -59017344 - L1_Mus3 LINE L1 -3 6635 6576 2 1052 458 225 18 0 chr13 61266968 61267079 -59017233 - Lx LINE L1 -6 7044 6932 2 1052 2019 247 50 4 chr13 61267082 61267626 -59016686 - Lx5 LINE L1 -4 7046 6478 2 1052 808 159 6 6 chr13 61267645 61267776 -59016536 + polypyrimidine Low_complexity Low_complexity 28 158 0 2 1052 1066 117 6 6 chr13 61267776 61267956 -59016356 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 1052 808 159 6 6 chr13 61267956 61267982 -59016330 + polypyrimidine Low_complexity Low_complexity 1 27 0 2 1052 292 29 0 0 chr13 61267982 61268016 -59016296 + (TCC)n Simple_repeat Simple_repeat 1 34 0 2 1052 2464 171 79 12 chr13 61268016 61268509 -59015803 - Lx LINE L1 -20 6634 6109 2 1052 518 366 25 9 chr13 61268514 61268831 -59015481 - Lx8 LINE L1 -699 6774 6453 2 1052 293 320 39 30 chr13 61268915 61269118 -59015194 - Lx7 LINE L1 -1406 6290 6086 2 1052 313 345 71 40 chr13 61269211 61269507 -59014805 + MER31A LTR ERV1 15 319 -166 2 1052 3878 114 3 3 chr13 61269977 61270833 -59013479 + L1_Mus4 LINE L1 5326 6182 -454 2 1052 435 157 0 12 chr13 61270836 61270920 -59013392 + RMER1A Other Other 943 1025 -5 2 1052 3475 118 26 12 chr13 61270910 61271541 -59012771 + L1_Mus3 LINE L1 5993 6647 -7 2 1052 428 337 115 11 chr13 61272257 61272518 -59011794 - L1MB7 LINE L1 -257 5927 5640 2 1052 331 265 39 10 chr13 61272974 61273077 -59011235 - MTC-int LTR MaLR -1152 106 1 3 1052 504 0 0 0 chr13 61273129 61273185 -59011127 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1052 448 232 63 0 chr13 61273193 61273288 -59011024 - RSINE1 SINE B4 -41 124 24 3 1052 1669 190 60 3 chr13 61273357 61273706 -59010606 + Lx2 LINE L1 6629 6997 0 3 1052 597 299 47 12 chr13 61274215 61274384 -59009928 + B3 SINE B2 2 176 -40 3 1052 1419 45 0 0 chr13 61274428 61274607 -59009705 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 3 1052 756 0 0 0 chr13 61274608 61274692 -59009620 + (GAGAA)n Simple_repeat Simple_repeat 1 84 0 3 1052 774 299 19 14 chr13 61274812 61275022 -59009290 + B3 SINE B2 5 215 -1 3 1052 661 346 57 19 chr13 61275203 61275465 -59008847 - MTD LTR MaLR -147 272 1 3 1052 396 263 58 0 chr13 61275542 61275679 -59008633 - L1_Rod LINE L1 -3952 1895 1751 3 1052 4093 189 13 1 chr13 61276067 61276763 -59007549 - RLTR45-int LTR ERVK -210 7196 6493 3 1052 1096 286 13 10 chr13 61276811 61277208 -59007104 - RLTR45-int LTR ERVK -470 7747 7411 3 1052 560 373 17 19 chr13 61276918 61277399 -59006913 - MuRRS4-int LTR ERV1 -227 4836 4357 3 1052 5214 173 48 64 chr13 61277414 61279370 -59004942 - RLTR45-int LTR ERVK -1411 5833 2555 3 1052 681 175 25 0 chr13 61279383 61279503 -59004809 - RMER16-int LTR ERVK -5077 1060 938 3 1052 2111 190 129 10 chr13 61279508 61280012 -59004300 - RMER16-int LTR ERVK -4587 819 256 3 1052 266 331 27 16 chr13 61280164 61280348 -59003964 - RMER16-int LTR ERVK -6878 366 181 3 1052 647 267 15 0 chr13 61280914 61281045 -59003267 - ETnERV2-int LTR ERVK -204 7202 7070 3 1052 535 266 17 43 chr13 61281058 61281290 -59003022 - L1_Rod LINE L1 -4103 1744 1519 3 1052 337 309 93 76 chr13 61281370 61282168 -59002144 - L1_Mur3 LINE L1 -1037 4843 4033 3 1052 351 288 95 7 chr13 61282174 61282321 -59001991 - Lx6 LINE L1 -34 7426 7267 3 1052 666 192 31 0 chr13 61282391 61282521 -59001791 + Lx3C LINE L1 6600 6733 -243 3 1052 2819 223 40 31 chr13 61282518 61283234 -59001078 - L1_Mur3 LINE L1 -85 5795 5073 3 1052 5086 211 38 8 chr13 61283226 61284452 -58999860 - L1_Mur3 LINE L1 -1131 4749 3488 3 1052 761 210 25 13 chr13 61284454 61284613 -58999699 - RLTR13D6 LTR ERVK 0 1033 873 3 1052 1970 30 0 0 chr13 61284651 61284884 -58999428 - L1Md_F2 LINE L1 -14 6568 6336 3 1052 7150 96 5 6 chr13 61284884 61286244 -58998068 - L1_Mus1 LINE L1 -9 6558 5198 3 1052 1262 129 0 0 chr13 61286248 61286434 -58997878 + L1_Mus1 LINE L1 4956 5141 -742 3 1052 4916 109 21 74 chr13 61286434 61287303 -58997009 - RLTR13D6 LTR ERVK -140 762 1 3 1052 3780 171 40 1 chr13 61287321 61287999 -58996313 - ETnERV3-int LTR ERVK -31 5777 5074 3 1052 2583 42 0 0 chr13 61288002 61288313 -58995999 - L1Md_F2 LINE L1 -648 5934 5624 3 1052 1782 136 79 15 chr13 61288313 61288642 -58995670 - RLTR45-int LTR ERVK -1431 5813 5464 3 1052 2904 218 103 29 chr13 61288667 61290137 -58994175 - L1_Mur3 LINE L1 -2431 3449 1103 3 1052 554 188 0 0 chr13 61290137 61290238 -58994074 + L1VL1 LINE L1 20 120 -6302 3 1052 31548 81 5 1 chr13 61290229 61295083 -58989229 + L1Md_F2 LINE L1 715 5586 -297 3 1052 7223 72 16 10 chr13 61295084 61296073 -58988239 + L1Md_F2 LINE L1 5588 6582 0 3 1052 280 239 0 15 chr13 61296079 61296147 -58988165 - L1_Mur3 LINE L1 -6613 1115 1049 3 1052 253 404 48 33 chr13 61297164 61297374 -58986938 + B4A SINE B4 48 260 -32 3 1052 423 38 0 0 chr13 61297393 61297446 -58986866 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1052 269 250 0 0 chr13 61297600 61297656 -58986656 - B3A SINE B2 -142 56 1 3 1052 182 0 107 0 chr13 61297977 61298005 -58986307 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 3 1052 964 105 0 65 chr13 61298149 61298302 -58986010 + B1_Mus1 SINE Alu 3 145 -3 3 1052 183 80 0 0 chr13 61298307 61298332 -58985980 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1052 263 0 0 78 chr13 61298584 61298635 -58985677 + (TATG)n Simple_repeat Simple_repeat 3 49 0 3 1052 187 0 0 104 chr13 61298725 61298773 -58985539 + (TATG)n Simple_repeat Simple_repeat 3 45 0 3 1052 566 254 189 22 chr13 61299271 61299456 -58984856 - B3 SINE B2 0 216 1 3 1052 24 77 0 0 chr13 61300219 61300271 -58984041 + AT_rich Low_complexity Low_complexity 1 52 0 3 1052 8176 196 22 10 chr13 61300277 61302746 -58981566 + Lx4B LINE L1 4459 6978 -22 3 1052 498 336 74 19 chr13 61306231 61306598 -58977714 - Lx7 LINE L1 -384 7312 6926 3 1052 704 207 85 77 chr13 61306598 61306844 -58977468 - Lx5 LINE L1 -776 6274 6027 3 1052 4979 218 58 46 chr13 61306844 61307372 -58976940 - RMER12 LTR ERVK 0 1322 769 3 1052 180 111 0 0 chr13 61307372 61307399 -58976913 + (TAGA)n Simple_repeat Simple_repeat 1 27 0 3 1052 4979 218 58 46 chr13 61307399 61308176 -58976136 - RMER12 LTR ERVK -554 768 2 3 1052 832 138 60 7 chr13 61308184 61308462 -58975850 - Lx5 LINE L1 -1026 6024 5656 3 1052 2890 246 39 29 chr13 61308460 61309181 -58975131 + Lx5 LINE L1 6273 7000 -50 3 1052 285 29 0 0 chr13 61309201 61309235 -58975077 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 3 1052 953 309 47 18 chr13 61309287 61309669 -58974643 - Lx7 LINE L1 -825 6871 6479 3 1052 401 276 118 25 chr13 61309736 61309848 -58974464 - Lx7 LINE L1 -1388 6308 6192 3 1052 444 77 0 0 chr13 61309848 61309913 -58974399 + (TATG)n Simple_repeat Simple_repeat 2 66 0 3 1052 401 276 118 25 chr13 61309913 61310004 -58974308 - Lx7 LINE L1 -1505 6191 6086 3 1052 263 368 94 32 chr13 61310191 61310500 -58973812 + MER31A LTR ERV1 150 477 -8 3 1052 1848 131 141 0 chr13 61311683 61312045 -58972267 + L1_Mm LINE L1 1566 1977 -3909 3 1052 257 214 66 22 chr13 61312029 61312120 -58972192 + MMSAT4 Satellite Satellite 50 144 -24 3 1052 607 350 25 8 chr13 61312594 61312839 -58971473 + RMER15 LTR ERVL 228 476 -99 3 1052 293 244 0 34 chr13 61312922 61312968 -58971344 + T-rich Low_complexity Low_complexity 43 86 0 3 1052 1185 142 0 5 chr13 61312968 61313159 -58971153 - B2_Mm2 SINE B2 -5 190 1 3 1052 293 244 0 34 chr13 61313159 61313201 -58971111 + T-rich Low_complexity Low_complexity 1 42 0 3 1052 589 257 170 39 chr13 61314640 61314976 -58969336 - L1_Rod LINE L1 -3953 1894 1515 3 1052 4031 191 39 10 chr13 61315328 61316228 -58968084 + L1_Mur3 LINE L1 4201 5126 -754 3 1052 824 255 88 50 chr13 61316222 61316646 -58967666 + L1_Mur3 LINE L1 1171 1621 -4259 3 1052 423 101 0 37 chr13 61316666 61316748 -58967564 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 3 1052 246 153 13 89 chr13 61316761 61316840 -58967472 + T-rich Low_complexity Low_complexity 2 74 0 3 1052 1245 259 17 0 chr13 61316996 61317289 -58967023 - MERVL_2A-int LTR ERVL -4174 1587 1290 3 1052 276 231 0 0 chr13 61317280 61317332 -58966980 - MERVL-int LTR ERVL -2575 2910 2859 3 1052 4868 233 54 80 chr13 61317451 61319018 -58965294 - MERVL-int LTR ERVL -2619 2866 1341 3 1052 3522 85 4 2 chr13 61319018 61319490 -58964822 + L1_Mus2 LINE L1 6094 6566 0 3 1052 22 0 0 0 chr13 61320456 61320478 -58963834 + AT_rich Low_complexity Low_complexity 1 22 0 3 1052 20009 133 43 10 chr13 61320673 61324609 -58959703 + L1_Mus1 LINE L1 562 4628 -1255 3 1052 29860 96 15 1 chr13 61324596 61329626 -58954686 + L1Md_F2 LINE L1 360 5462 -421 3 1052 1758 45 54 0 chr13 61329626 61329899 -58954413 + L1Md_F2 LINE L1 6333 6582 0 3 1052 1066 67 0 0 chr13 61329899 61330033 -58954279 + L1Md_F2 LINE L1 5452 5585 -298 3 1052 7369 73 6 4 chr13 61330034 61331016 -58953296 + L1Md_F2 LINE L1 5587 6570 -12 3 1052 7923 112 13 0 chr13 61331017 61332956 -58951356 + L1_Mus1 LINE L1 4601 6566 -1 3 1052 1345 247 9 3 chr13 61332969 61333310 -58951002 + L1_Mur2 LINE L1 5352 5694 -183 3 1052 497 27 27 0 chr13 61336458 61336531 -58947781 - L1Md_F3 LINE L1 0 6584 6510 3 1052 592 228 18 36 chr13 61336531 61336691 -58947621 - URR1A DNA MER1_type -7 219 62 3 1052 215 79 26 0 chr13 61337556 61337594 -58946718 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 3 1052 1133 74 0 20 chr13 61337598 61337749 -58946563 - B1_Mus1 SINE Alu 0 148 1 3 1052 32 57 0 0 chr13 61340450 61340503 -58943809 + AT_rich Low_complexity Low_complexity 1 53 0 3 1052 782 283 101 3 chr13 61340681 61341018 -58943294 - ORR1D2 LTR MaLR 0 370 1 3 131 1295 313 45 31 chr13 61341647 61342227 -58942085 - Lx8 LINE L1 -494 6979 6392 3 1053 319 283 127 79 chr13 61342232 61342438 -58941874 - Lx8 LINE L1 -1285 6188 5968 3 1053 423 0 0 0 chr13 61342438 61342485 -58941827 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1053 319 283 127 79 chr13 61342485 61342593 -58941719 - Lx8 LINE L1 -1506 5967 5859 3 1053 28 0 0 0 chr13 61343245 61343273 -58941039 + AT_rich Low_complexity Low_complexity 1 28 0 3 1053 427 204 0 11 chr13 61343938 61344032 -58940280 + Lx7 LINE L1 6149 6241 -1455 3 1053 216 0 0 0 chr13 61344040 61344064 -58940248 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3 1053 786 60 0 0 chr13 61344064 61344164 -58940148 - B1_Mm SINE Alu -10 137 38 3 1053 4739 244 20 7 chr13 61344164 61345206 -58939106 + Lx6 LINE L1 6228 7283 -177 3 1053 267 167 0 0 chr13 61345399 61345465 -58938847 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1053 2167 44 7 0 chr13 61345492 61345819 -58938493 - L1Md_A LINE L1 0 6582 6308 3 1053 253 281 0 17 chr13 61345819 61345878 -58938434 + T-rich Low_complexity Low_complexity 1 59 0 3 1053 254 247 0 13 chr13 61345940 61346018 -58938294 + GA-rich Low_complexity Low_complexity 4 80 0 3 1053 755 288 18 19 chr13 61346297 61346520 -58937792 + RMER12 LTR ERVK 2 223 -1625 3 1053 1694 268 44 30 chr13 61346590 61347093 -58937219 + RLTR11A2 LTR ERVK 1 510 -17 3 1053 580 103 0 18 chr13 61347144 61347253 -58937059 + L1_Mus3 LINE L1 6530 6636 -2 3 1053 594 28 0 0 chr13 61347967 61348039 -58936273 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 3 1053 408 274 19 0 chr13 61348546 61348652 -58935660 - Lx9 LINE L1 -452 7192 7085 3 1053 183 204 0 0 chr13 61348778 61348822 -58935490 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 1053 1146 75 7 0 chr13 61348857 61349004 -58935308 + B1_Mus1 SINE Alu 1 148 0 3 1053 215 160 0 20 chr13 61349006 61349057 -58935255 + A-rich Low_complexity Low_complexity 2 51 0 3 1053 24 53 0 0 chr13 61349136 61349174 -58935138 + AT_rich Low_complexity Low_complexity 1 38 0 3 1053 499 333 34 6 chr13 61350003 61350181 -58934131 + B3A SINE B2 1 183 -15 3 1053 262 352 87 8 chr13 61350274 61350400 -58933912 + B4A SINE B4 157 292 0 3 1053 4818 101 39 1 chr13 61350887 61351599 -58932713 + L1_Mus4 LINE L1 5897 6635 -1 3 1053 306 0 0 0 chr13 61351609 61351643 -58932669 + (CATA)n Simple_repeat Simple_repeat 1 34 0 3 1053 1220 152 30 0 chr13 61352047 61352245 -58932067 - URR1A DNA MER1_type -1 225 22 3 1053 3545 154 9 2 chr13 61353492 61354076 -58930236 - L1_Mur2 LINE L1 -187 5690 5103 3 1053 1937 187 25 13 chr13 61354076 61354471 -58929841 + Lx4A LINE L1 6653 7052 -6 3 1053 234 0 0 0 chr13 61354471 61354497 -58929815 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 1053 22 0 0 0 chr13 61354498 61354520 -58929792 + AT_rich Low_complexity Low_complexity 1 22 0 3 1053 21 57 0 0 chr13 61354552 61354587 -58929725 + AT_rich Low_complexity Low_complexity 1 35 0 3 1053 1208 48 0 0 chr13 61355636 61355782 -58928530 + B1_Mus2 SINE Alu 2 147 0 3 1053 2090 187 24 19 chr13 61357008 61357427 -58926885 - MTC LTR MaLR 0 421 1 4 1053 242 278 60 30 chr13 61357853 61357953 -58926359 - L1MB5 LINE L1 -137 6037 5935 4 1053 6835 132 11 6 chr13 61357981 61359247 -58925065 - Lx LINE L1 -7 6647 5374 4 1053 2474 201 72 42 chr13 61359247 61359870 -58924442 + RLTR26 LTR ERVK 1 642 0 4 1053 2370 172 48 11 chr13 61359872 61360349 -58923963 - Lx LINE L1 -506 5377 4883 4 1053 878 70 139 0 chr13 61360411 61360540 -58923772 + B1_Mm SINE Alu 1 147 0 4 1053 217 0 61 0 chr13 61360540 61360573 -58923739 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1053 529 299 55 44 chr13 61360970 61361243 -58923069 + MER31A LTR ERV1 83 358 -127 4 1053 220 336 87 32 chr13 61361746 61361872 -58922440 + MER5A DNA MER1_type 31 163 -26 4 1053 3647 307 78 11 chr13 61362042 61362246 -58922066 - Lx6 LINE L1 -569 7127 6924 4 1053 384 22 0 0 chr13 61362246 61362291 -58922021 + (TC)n Simple_repeat Simple_repeat 1 45 0 4 1053 4578 243 37 11 chr13 61362291 61363894 -58920418 - Lx6 LINE L1 -773 6923 5218 4 1053 1691 185 65 67 chr13 61363887 61364351 -58919961 + L1_Mur3 LINE L1 4355 4817 -1063 4 1053 182 279 90 78 chr13 61364793 61364960 -58919352 - L4 LINE RTE -1759 270 102 4 1053 2495 228 131 20 chr13 61365182 61365929 -58918383 - Lx7 LINE L1 -4 7692 6863 4 1053 1604 269 96 11 chr13 61365926 61366478 -58917834 - Lx7 LINE L1 -1101 6595 5997 4 1053 29 47 0 0 chr13 61366851 61366894 -58917418 + AT_rich Low_complexity Low_complexity 1 43 0 4 1053 1329 280 42 32 chr13 61366917 61367389 -58916923 + Lx6 LINE L1 5790 6266 -1194 4 1053 611 283 13 72 chr13 61367444 61367680 -58916632 + Lx6 LINE L1 6656 6877 -583 4 1053 4052 94 30 0 chr13 61368043 61368607 -58915705 - Lx3_Mus LINE L1 0 7009 6429 4 1053 464 272 42 42 chr13 61368670 61368685 -58915627 - B1_Mur1 SINE Alu -1 148 137 4 1053 387 60 0 0 chr13 61368685 61368735 -58915577 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 4 1053 464 272 42 42 chr13 61368735 61368861 -58915451 - B1_Mur1 SINE Alu -13 136 7 4 1053 2409 270 45 13 chr13 61368978 61369583 -58914729 - Lx5 LINE L1 -2 7048 6425 4 1053 1020 298 36 7 chr13 61369992 61370368 -58913944 + MTD LTR MaLR 20 404 -15 4 1053 1495 77 14 5 chr13 61370651 61370872 -58913440 + L1_Mus3 LINE L1 6410 6632 -6 4 1053 581 361 130 25 chr13 61372348 61373039 -58911273 - Lx8 LINE L1 -162 7311 6548 4 1053 993 102 12 6 chr13 61373664 61373831 -58910481 + (GGGAA)n Simple_repeat Simple_repeat 3 170 0 4 1053 1335 287 91 97 chr13 61374115 61375291 -58909021 + RLTR22_Mur LTR ERVK 1 1448 -400 4 1053 402 39 0 0 chr13 61375291 61375343 -58908969 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1053 360 269 142 91 chr13 61375343 61375468 -58908844 + RLTR22_Mur LTR ERVK 1449 1573 -275 4 1053 324 301 75 40 chr13 61375464 61375637 -58908675 + RMER12 LTR ERVK 1144 1322 0 4 1053 2653 196 6 76 chr13 61376434 61376780 -58907532 + RMER4B LTR ERVK 1 324 -261 4 1053 207 0 0 0 chr13 61376780 61376803 -58907509 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 4 1053 2653 196 6 76 chr13 61376803 61377084 -58907228 + RMER4B LTR ERVK 325 584 -1 4 1053 239 265 0 29 chr13 61377286 61377391 -58906921 + T-rich Low_complexity Low_complexity 2 103 0 4 1053 266 324 0 26 chr13 61377443 61377557 -58906755 + MER52-int LTR ERV1 4169 4279 -2812 4 1053 4309 53 2 9 chr13 61378613 61379169 -58905143 - L1Md_F2 LINE L1 0 6582 6031 4 1053 1764 269 18 27 chr13 61379767 61380282 -58904030 + RLTR11A2 LTR ERVK 1 510 -17 4 1053 1122 68 0 14 chr13 61380291 61380427 -58903885 + B1_Mus2 SINE Alu 2 137 -10 4 1053 306 0 0 0 chr13 61380427 61380461 -58903851 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1053 1122 68 0 14 chr13 61380461 61380472 -58903840 + B1_Mus2 SINE Alu 138 147 0 4 1053 34 24 0 0 chr13 61381365 61381406 -58902906 + AT_rich Low_complexity Low_complexity 1 41 0 4 1053 285 232 14 28 chr13 61382208 61382279 -58902033 - RLTR16 LTR ERVK -412 93 24 4 1053 639 217 23 6 chr13 61382361 61382537 -58901775 - MYSERV16_I-int LTR ERVK -76 2250 2072 4 1053 291 231 31 0 chr13 61382567 61382632 -58901680 - Lx9 LINE L1 -493 7151 7085 4 1053 304 298 85 32 chr13 61382631 61382877 -58901435 + Lx9 LINE L1 7336 7594 -50 4 1053 29 70 0 0 chr13 61382919 61382976 -58901336 + AT_rich Low_complexity Low_complexity 1 57 0 4 1053 301 317 131 0 chr13 61383787 61383932 -58900380 + B3 SINE B2 1 164 -52 4 1053 360 0 0 0 chr13 61384169 61384209 -58900103 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1053 2971 198 13 25 chr13 61384586 61385183 -58899129 + Lx2 LINE L1 6407 6996 -1 4 1053 1329 163 23 0 chr13 61385681 61385896 -58898416 - URR1A DNA MER1_type -1 225 6 4 1053 3143 168 28 2 chr13 61387123 61387695 -58896617 - L1_Mur2 LINE L1 -190 5687 5101 4 1053 1873 221 30 12 chr13 61387694 61388093 -58896219 + Lx4A LINE L1 6653 7058 0 4 1053 26 30 0 0 chr13 61388154 61388187 -58896125 + AT_rich Low_complexity Low_complexity 1 33 0 4 1053 558 94 0 10 chr13 61389490 61389587 -58894725 + L1_Mus2 LINE L1 6471 6566 0 4 1053 1466 197 36 0 chr13 61390366 61390670 -58893642 + Lx2 LINE L1 6683 6997 0 4 1053 280 299 10 10 chr13 61390840 61390938 -58893374 + Lx9 LINE L1 6772 6869 -775 4 1053 1471 69 25 0 chr13 61391529 61391733 -58892579 - L1Md_F2 LINE L1 -10 6572 6364 4 1053 612 98 8 97 chr13 61391778 61391902 -58892410 - L1_Mus2 LINE L1 -2 6564 6452 4 1053 2904 148 7 39 chr13 61392884 61393476 -58890836 - L1_Mur1 LINE L1 -2149 3737 3165 4 1053 1326 196 118 0 chr13 61393477 61393799 -58890513 + Lx2 LINE L1 6581 6940 -57 4 1053 216 0 0 0 chr13 61394543 61394567 -58889745 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1053 309 253 0 139 chr13 61394611 61394712 -58889600 - B1F SINE Alu -29 120 34 4 1053 2425 190 12 68 chr13 61394801 61395360 -58888952 + RMER4B LTR ERVK 1 528 -57 4 1053 1543 174 0 15 chr13 61395505 61395779 -58888533 - Lx LINE L1 -3 6651 6382 4 1053 270 81 0 0 chr13 61395863 61395900 -58888412 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 4 1053 207 0 0 0 chr13 61395900 61395923 -58888389 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1053 1809 275 22 20 chr13 61397785 61398294 -58886018 + RLTR11A2 LTR ERVK 1 510 -17 4 1053 420 20 0 0 chr13 61398425 61398474 -58885838 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1053 3610 54 0 5 chr13 61398795 61399244 -58885068 + L1Md_F2 LINE L1 6123 6569 -13 4 1053 351 350 56 61 chr13 61400060 61400258 -58884054 + B3A SINE B2 1 197 -1 4 1053 2819 175 53 7 chr13 61400836 61401423 -58882889 + Lx2B LINE L1 6386 6999 -1 4 1053 3025 28 3 0 chr13 61401664 61402022 -58882290 + L1Md_A LINE L1 6224 6582 0 4 1053 21 0 0 0 chr13 61402093 61402114 -58882198 + AT_rich Low_complexity Low_complexity 1 21 0 4 1053 1080 183 25 0 chr13 61402323 61402520 -58881792 - URR1A DNA MER1_type -4 222 21 4 1053 211 222 18 53 chr13 61403481 61403538 -58880774 + L4 LINE RTE 1701 1755 -274 4 1053 466 200 9 19 chr13 61403702 61403809 -58880503 + Lx4A LINE L1 6950 7055 -3 4 1053 208 237 0 0 chr13 61403817 61403876 -58880436 + A-rich Low_complexity Low_complexity 1 59 0 4 1053 22 0 0 0 chr13 61403876 61403898 -58880414 + AT_rich Low_complexity Low_complexity 1 22 0 4 1053 7881 39 2 1 chr13 61404913 61406145 -58878167 - L1Md_F2 LINE L1 0 6582 5348 4 1053 1840 213 39 27 chr13 61407445 61407851 -58876461 - MTC LTR MaLR 0 421 11 4 1053 22 0 0 0 chr13 61408770 61408792 -58875520 + AT_rich Low_complexity Low_complexity 1 22 0 4 1053 539 353 87 25 chr13 61408866 61409221 -58875091 + MER31A LTR ERV1 99 475 -10 4 1053 543 289 21 10 chr13 61409935 61410127 -58874185 - Lx6 LINE L1 -351 7109 6916 4 1053 423 0 0 0 chr13 61410130 61410177 -58874135 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 1053 2654 279 34 18 chr13 61410181 61411058 -58873254 - Lx6 LINE L1 -781 6679 5789 4 1053 6769 78 0 48 chr13 61411101 61412057 -58872255 - L1_Mus4 LINE L1 -2 6634 5727 4 1053 527 176 48 0 chr13 61412057 61412182 -58872130 - L1_Mus3 LINE L1 0 6638 6508 4 1053 6769 78 0 48 chr13 61412182 61412255 -58872057 - L1_Mus4 LINE L1 -910 5726 5654 4 1053 3492 149 0 2 chr13 61412250 61412842 -58871470 + L1_Mus4 LINE L1 5065 5655 -228 4 1053 2074 206 21 44 chr13 61412838 61413393 -58870919 - Lx6 LINE L1 -1663 5797 5254 4 1053 1737 152 65 21 chr13 61413394 61413756 -58870556 - ORR1A2 LTR MaLR 0 346 3 4 1053 9434 165 64 11 chr13 61413758 61415622 -58868690 - ORR1A2-int LTR MaLR 0 1963 1 4 1053 1915 144 22 3 chr13 61415622 61415942 -58868370 - ORR1A2 LTR MaLR 0 327 2 4 1053 2084 172 13 50 chr13 61415977 61416455 -58867857 + L1_Mur3 LINE L1 4357 4816 -1064 4 1053 4401 242 80 50 chr13 61418233 61419759 -58864553 - Lx7 LINE L1 0 7696 6125 4 1053 23 33 0 0 chr13 61420307 61420337 -58863975 + AT_rich Low_complexity Low_complexity 1 30 0 4 1053 257 250 9 0 chr13 61420445 61420553 -58863759 + (TA)n Simple_repeat Simple_repeat 1 109 0 4 1053 2147 53 7 18 chr13 61420695 61420980 -58863332 + L1_Mus1 LINE L1 6044 6325 -242 4 1053 1143 107 25 10 chr13 61420981 61421179 -58863133 - L1_Mus4 LINE L1 -4 6632 6432 4 1053 827 366 13 37 chr13 61421179 61421808 -58862504 - Lx9 LINE L1 -354 7290 6677 4 1053 267 31 0 0 chr13 61421816 61421848 -58862464 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 1053 245 226 9 0 chr13 61421856 61421971 -58862341 + (TG)n Simple_repeat Simple_repeat 2 117 0 4 1053 360 240 10 29 chr13 61422359 61422462 -58861850 + Lx9 LINE L1 6776 6876 -768 4 1053 3079 88 2 47 chr13 61422490 61422940 -58861372 - L1_Mus2 LINE L1 0 6566 6137 4 1053 23009 128 13 67 chr13 61422940 61423408 -58860904 + L1Md_F2 LINE L1 1634 2109 -3774 4 1053 5064 57 18 3 chr13 61423408 61424060 -58860252 - L1Md_F2 LINE L1 -1 6581 5920 4 1053 23009 130 12 66 chr13 61424060 61428078 -58856234 + L1Md_F2 LINE L1 2110 5899 -683 4 1053 296 29 0 0 chr13 61428078 61428113 -58856199 - U2 snRNA snRNA -153 35 1 4 1053 23009 130 12 66 chr13 61428113 61428833 -58855479 + L1Md_F2 LINE L1 5900 6580 -2 4 1053 14519 128 16 3 chr13 61428860 61431731 -58852581 - L1_Mus2 LINE L1 -415 6151 3240 4 1053 38202 22 3 6 chr13 61431704 61438105 -58846207 - L1Md_A LINE L1 -2 6580 201 4 1053 12552 106 11 8 chr13 61438099 61440185 -58844127 - MusHAL1 LINE L1 -620 2092 1 4 1053 2731 197 62 13 chr13 61440151 61440845 -58843467 - L1_Mus2 LINE L1 -5380 1236 509 4 1053 414 0 0 0 chr13 61441785 61441831 -58842481 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1053 1032 73 0 35 chr13 61441855 61441997 -58842315 + B1_Mus1 SINE Alu 4 140 -8 4 1053 1474 11 0 11 chr13 61441999 61442181 -58842131 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1053 184 203 91 30 chr13 61442264 61442330 -58841982 - L2a LINE L2 -125 3301 3232 5 1053 15506 79 3 4 chr13 61442433 61444702 -58839610 + L1_Mm LINE L1 3270 5536 -347 5 1053 4542 147 13 1 chr13 61445088 61445790 -58838522 - ETnERV2-int LTR ERVK -204 7202 6493 5 1053 960 303 9 6 chr13 61445898 61446220 -58838092 - RNERVK23-int LTR ERVK -469 7748 7426 5 1053 337 218 0 0 chr13 61447269 61447347 -58836965 - RNERVK23-int LTR ERVK -1886 6331 6254 5 1053 648 213 47 0 chr13 61448159 61448286 -58836026 - ETnERV2-int LTR ERVK -204 7202 7070 5 1053 7217 67 4 5 chr13 61448287 61449321 -58834991 + L1Md_F2 LINE L1 5529 6561 -21 5 1053 603 0 0 0 chr13 61449321 61449388 -58834924 + (TA)n Simple_repeat Simple_repeat 1 67 0 5 1053 201 171 0 0 chr13 61449397 61449432 -58834880 + A-rich Low_complexity Low_complexity 1 35 0 5 1053 2816 118 22 0 chr13 61449805 61450269 -58834043 - MusHAL1 LINE L1 -281 2431 1958 5 1053 1747 186 69 13 chr13 61450270 61450663 -58833649 + Lx2 LINE L1 6581 6995 -2 5 1053 616 298 20 123 chr13 61451400 61451603 -58832709 - B3 SINE B2 -13 182 1 5 1053 1331 247 64 8 chr13 61451617 61452103 -58832209 - RCHARR1 DNA MER1_type -137 837 325 5 1053 258 56 0 0 chr13 61452273 61452309 -58832003 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1053 1782 263 52 8 chr13 61452313 61452793 -58831519 + Lx6 LINE L1 6878 7378 -82 5 1053 210 369 23 62 chr13 61454674 61454804 -58829508 + B3A SINE B2 67 191 -7 5 1053 247 307 58 58 chr13 61454891 61455012 -58829300 + B4A SINE B4 168 288 -4 5 1053 3888 87 2 19 chr13 61455603 61456141 -58828171 + L1_Mus2 LINE L1 6038 6566 0 5 1053 465 19 0 0 chr13 61458450 61458504 -58825808 + (TA)n Simple_repeat Simple_repeat 1 54 0 5 1053 512 356 115 16 chr13 61460860 61461242 -58823070 + MER31A LTR ERV1 61 480 -5 5 1053 1540 277 28 30 chr13 61461602 61462074 -58822238 - Lx6 LINE L1 -31 7429 6959 5 1053 2981 221 40 66 chr13 61462099 61463078 -58821234 + L1_Mus1 LINE L1 5612 6564 -3 5 1053 233 383 0 32 chr13 61463102 61463226 -58821086 + Lx5 LINE L1 6205 6324 -726 5 1053 3762 94 2 43 chr13 61463238 61463582 -58820730 + MusHAL1 LINE L1 421 755 -1957 5 1053 1157 68 0 7 chr13 61463582 61463729 -58820583 + B1_Mus1 SINE Alu 1 146 -2 5 1053 3762 94 2 43 chr13 61463729 61464027 -58820285 + MusHAL1 LINE L1 756 1036 -1676 5 1053 1930 100 71 6 chr13 61464005 61464358 -58819954 + MusHAL1 LINE L1 1705 2080 -632 5 1053 1138 112 34 0 chr13 61464681 61464860 -58819452 - B2_Mm2 SINE B2 -8 187 3 5 1053 27840 102 47 6 chr13 61465000 61470687 -58813625 - Lx3_Mus LINE L1 -2 7007 1006 5 1053 1280 264 69 11 chr13 61471056 61471436 -58812876 + MTD LTR MaLR 13 402 -17 5 1053 21 36 0 0 chr13 61472179 61472207 -58812105 + AT_rich Low_complexity Low_complexity 1 28 0 5 1054 295 299 0 0 chr13 61473373 61473470 -58810842 - Lx7 LINE L1 -604 7092 6996 5 1054 712 256 10 10 chr13 61473605 61473802 -58810510 - Lx7 LINE L1 -1241 6455 6259 5 1054 348 24 0 0 chr13 61474094 61474135 -58810177 + (GA)n Simple_repeat Simple_repeat 2 42 0 5 1054 2994 52 0 21 chr13 61475161 61475550 -58808762 + L1Md_F2 LINE L1 6202 6582 0 5 1054 270 0 0 0 chr13 61476158 61476188 -58808124 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1054 26 50 0 0 chr13 61478060 61478100 -58806212 + AT_rich Low_complexity Low_complexity 1 40 0 5 1054 1579 185 43 15 chr13 61478267 61478596 -58805716 + RLTR15 LTR ERVK 8 345 -14 5 1054 1546 196 124 23 chr13 61479091 61479426 -58804886 + MTC LTR MaLR 1 376 -45 5 1054 468 0 0 0 chr13 61479426 61479478 -58804834 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1054 1546 196 124 23 chr13 61479478 61479496 -58804816 + MTC LTR MaLR 377 390 -31 5 1054 198 118 0 0 chr13 61479498 61479532 -58804780 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 5 1054 2335 242 92 61 chr13 61480055 61480772 -58803540 + RMER13A LTR ERVK 14 752 -108 5 1054 3189 76 2 4 chr13 61481033 61481496 -58802816 + L1Md_F2 LINE L1 638 1099 -5625 5 1054 29425 45 3 1 chr13 61481521 61485392 -58798920 + L1Md_F2 LINE L1 1705 5586 -297 5 1054 7418 68 19 2 chr13 61485392 61486359 -58797953 + L1Md_F2 LINE L1 5587 6569 -13 5 1054 885 74 41 8 chr13 61486409 61486531 -58797781 - B2_Mm2 SINE B2 -66 129 4 5 1054 6621 61 69 0 chr13 61486531 61487525 -58796787 + L1_Mus1 LINE L1 5505 6566 -1 5 1054 696 349 116 12 chr13 61487528 61487949 -58796363 + MTE-int LTR MaLR 1109 1573 -7 5 1054 459 0 0 0 chr13 61488030 61488081 -58796231 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1054 1580 274 32 4 chr13 61488354 61488815 -58795497 + Lx6 LINE L1 6321 6794 -666 5 1054 22 0 0 0 chr13 61488960 61488982 -58795330 + AT_rich Low_complexity Low_complexity 1 22 0 5 1054 482 315 32 27 chr13 61489013 61489199 -58795113 - B3A SINE B2 -10 188 2 5 1054 4849 94 105 10 chr13 61489619 61490050 -58794262 - L1_Mus3 LINE L1 -1 6637 6205 5 1054 3310 41 5 0 chr13 61490050 61490444 -58793868 - MTA_Mm LTR MaLR 0 396 1 5 1054 4849 94 105 10 chr13 61490444 61490743 -58793569 - L1_Mus3 LINE L1 -434 6204 5837 5 1054 453 50 0 0 chr13 61491585 61491645 -58792667 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 1054 379 244 94 18 chr13 61493815 61493986 -58790326 + L1_Rod LINE L1 544 727 -6445 5 1054 27348 95 14 2 chr13 61493986 61498678 -58785634 + L1Md_F LINE L1 557 5307 -576 5 1054 8884 28 1 6 chr13 61498673 61500000 -58784312 + L1Md_Gf LINE L1 86 1509 -4377 5 1054 31606 41 0 0 chr13 61500000 61504080 -58780232 + L1Md_T LINE L1 1507 5586 -297 1 1054 8938 8 0 3 chr13 61504080 61505079 -58779233 + L1Md_T LINE L1 5587 6582 0 1 1054 2273 50 3 7 chr13 61505083 61505378 -58778934 + L1_Rod LINE L1 5292 5586 -297 2 1054 7533 70 12 3 chr13 61505378 61506363 -58777949 + L1Md_F2 LINE L1 5587 6580 -2 3 1054 2273 244 2009 30 chr13 61506363 61506922 -58777390 + L1_Rod LINE L1 5587 5592 -291 2 1054 18783 124 7 5 chr13 61507105 61510772 -58773540 + L1VL4 LINE L1 675 4353 -1530 4 1054 816 241 18 21 chr13 61510765 61511049 -58773263 + L1VL1 LINE L1 17 299 -6123 5 1054 3965 18 0 0 chr13 61511045 61511562 -58772750 - L1Md_T LINE L1 -656 5926 5410 6 1054 5438 36 0 0 chr13 61511562 61512205 -58772107 + L1Md_T LINE L1 5940 6582 0 6 1054 563 215 412 0 chr13 61512218 61512429 -58771883 + L1Md_A LINE L1 332 629 -5987 7 1054 264 116 0 0 chr13 61512427 61512470 -58771842 + L1Md_A LINE L1 587 629 -5987 7 1054 2654 67 0 93 chr13 61512468 61512928 -58771384 + L1Md_A LINE L1 928 1344 -5380 7 1054 934 18 0 0 chr13 61512936 61513046 -58771266 + L1Md_T LINE L1 5477 5586 -297 8 1054 8526 31 0 0 chr13 61513046 61514042 -58770270 + L1Md_T LINE L1 5587 6582 0 8 1054 2334 192 19 12 chr13 61514049 61514535 -58769777 + RMER16-int LTR ERVK 1080 1568 -3838 9 1054 32110 45 1 3 chr13 61514573 61518820 -58765492 + L1Md_F3 LINE L1 1346 5586 -297 1 1054 7683 55 11 0 chr13 61518820 61519793 -58764519 + L1Md_F3 LINE L1 5587 6570 -14 1 1054 1284 89 0 0 chr13 61519811 61519991 -58764321 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1054 21 0 0 0 chr13 61520156 61520177 -58764135 + AT_rich Low_complexity Low_complexity 1 21 0 1 1054 186 43 0 0 chr13 61520191 61520214 -58764098 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1054 8006 99 24 5 chr13 61520215 61521449 -58762863 + L1Md_F2 LINE L1 4329 5585 -298 1 1054 7694 71 0 7 chr13 61521450 61522453 -58761859 + L1Md_F2 LINE L1 5587 6582 0 1 1054 23 0 0 0 chr13 61522468 61522491 -58761821 + AT_rich Low_complexity Low_complexity 1 23 0 1 1054 5827 106 1 8 chr13 61522491 61523385 -58760927 + L1_Mm LINE L1 4987 5874 -9 1 1054 36524 11 0 7 chr13 61523399 61529235 -58755077 + L1Md_A LINE L1 1 5586 -297 1 1054 8763 17 0 0 chr13 61529235 61530231 -58754081 + L1Md_A LINE L1 5587 6582 0 1 1054 6962 129 13 20 chr13 61530224 61531367 -58752945 + Lx2 LINE L1 5862 6996 -1 1 1054 1322 208 48 95 chr13 61531368 61531957 -58752355 + L1_Rod LINE L1 4220 4780 -1067 1 1054 463 339 128 3 chr13 61531956 61532313 -58751999 - Lx8 LINE L1 -996 6700 6308 2 1054 794 308 6 12 chr13 61533096 61533354 -58750958 + RMER1A Other Other 1 444 -586 2 1054 2190 229 69 42 chr13 61533349 61533549 -58750763 + RMER1B Other Other 281 559 -507 2 1054 405 0 0 0 chr13 61533549 61533594 -58750718 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 1054 696 35 0 0 chr13 61533594 61533680 -58750632 + (CA)n Simple_repeat Simple_repeat 1 87 0 2 1054 2190 235 70 48 chr13 61533680 61534212 -58750100 + RMER1B Other Other 498 1019 -11 2 1054 180 0 0 0 chr13 61536565 61536585 -58747727 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 1054 389 280 61 56 chr13 61537949 61538146 -58746166 + B3A SINE B2 1 198 0 2 1054 372 43 0 0 chr13 61538308 61538354 -58745958 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1054 221 102 0 39 chr13 61543072 61543123 -58741189 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 2 1054 236 408 29 12 chr13 61543916 61544087 -58740225 + MER5A DNA MER1_type 16 189 0 2 1054 3016 225 72 55 chr13 61544153 61544693 -58739619 - RMER12 LTR ERVK 0 1322 769 2 1054 459 52 0 0 chr13 61544693 61544751 -58739561 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 3 1054 3016 225 72 55 chr13 61544751 61545069 -58739243 - RMER12 LTR ERVK -554 768 449 2 1054 414 222 18 53 chr13 61545058 61545172 -58739140 - RMER12 LTR ERVK -1212 110 1 2 1054 6122 177 14 0 chr13 61545553 61546662 -58737650 + MERVL-int LTR ERVL 2941 4065 -1420 3 1054 23 68 0 0 chr13 61546956 61547000 -58737312 + AT_rich Low_complexity Low_complexity 1 44 0 3 1054 255 402 16 8 chr13 61547858 61548106 -58736206 - Lx8 LINE L1 -216 7257 7008 3 1054 855 325 42 16 chr13 61548378 61548763 -58735549 - Lx8 LINE L1 -802 6671 6277 3 1054 206 193 18 0 chr13 61549031 61549088 -58735224 + (TGG)n Simple_repeat Simple_repeat 1 58 0 3 1054 625 327 128 21 chr13 61549100 61549381 -58734931 - ORR1D2 LTR MaLR -55 315 5 3 1054 2526 257 45 56 chr13 61549940 61550266 -58734046 - Lx7 LINE L1 0 7696 7390 3 1054 3549 71 2 11 chr13 61550266 61550737 -58733575 + L1_Mus1 LINE L1 6101 6567 0 3 1054 2526 257 45 56 chr13 61550737 61551394 -58732918 - Lx7 LINE L1 -307 7389 6725 3 1054 1240 349 55 14 chr13 61553270 61554173 -58730139 - Lx8 LINE L1 -282 7191 6252 3 1054 260 206 0 16 chr13 61554218 61554282 -58730030 + CT-rich Low_complexity Low_complexity 1 63 0 3 1054 2851 222 73 3 chr13 61554589 61555259 -58729053 + Lx5 LINE L1 6334 7050 0 4 1054 2680 133 12 7 chr13 61555673 61556103 -58728209 + BGLII_B LTR ERVK 10 441 0 4 1054 540 332 52 24 chr13 61556313 61556563 -58727749 - RLTR16 LTR ERVK -248 257 1 4 1054 3054 135 24 0 chr13 61556563 61557073 -58727239 - Lx3C LINE L1 -537 6439 5918 4 1054 33 56 0 0 chr13 61558290 61558344 -58725968 + AT_rich Low_complexity Low_complexity 1 54 0 4 1054 2679 227 12 23 chr13 61558524 61559256 -58725056 - L1_Rod LINE L1 -1464 4383 3660 4 1054 320 94 19 0 chr13 61559294 61559347 -58724965 + (TTCC)n Simple_repeat Simple_repeat 2 55 0 4 1054 265 187 27 0 chr13 61559354 61559429 -58724883 + CT-rich Low_complexity Low_complexity 5 81 0 4 1054 947 251 15 15 chr13 61559452 61559787 -58724525 - L1_Rod LINE L1 -2188 3659 3325 4 1054 1135 286 65 29 chr13 61559788 61560313 -58723999 + L1_Mur3 LINE L1 56 599 -7129 4 1054 734 173 81 0 chr13 61560311 61560484 -58723828 + Lx3C LINE L1 6790 6976 0 4 1054 2691 246 47 5 chr13 61560500 61561240 -58723072 + L1_Mur3 LINE L1 370 1140 -6588 4 1054 5578 104 12 1 chr13 61561251 61562057 -58722255 - L1_Mus4 LINE L1 -7 6629 5815 5 1054 1732 80 0 0 chr13 61562066 61562304 -58722008 + L1_Mus4 LINE L1 5587 5824 -812 5 1054 751 170 77 0 chr13 61562303 61562497 -58721815 + L1_Mur3 LINE L1 1135 1343 -6385 4 1054 1423 65 21 0 chr13 61562497 61562683 -58721629 + MTB_Mm LTR MaLR 218 407 0 5 1054 953 197 12 20 chr13 61562684 61562928 -58721384 + L1_Mur3 LINE L1 1435 1676 -4204 4 1054 731 202 8 0 chr13 61563288 61563417 -58720895 - ETnERV2-int LTR ERVK -204 7202 7073 5 1054 3532 204 27 130 chr13 61563417 61564168 -58720144 + L1_Mur3 LINE L1 1682 2444 -3436 4 1054 916 105 4 4 chr13 61564168 61564313 -58719999 - B1_Mus1 SINE Alu 0 148 5 5 1054 3532 204 27 130 chr13 61564313 61564619 -58719693 + L1_Mur3 LINE L1 2445 2756 -3124 4 1054 216 97 0 0 chr13 61564619 61564650 -58719662 + (TAA)n Simple_repeat Simple_repeat 2 32 0 5 1054 3532 204 27 130 chr13 61564650 61564751 -58719561 + L1_Mur3 LINE L1 2757 2849 -3031 4 1054 884 85 15 0 chr13 61564751 61564881 -58719431 + (GAAA)n Simple_repeat Simple_repeat 3 134 0 5 1054 33113 50 2 11 chr13 61564890 61567614 -58716698 + L1Md_T LINE L1 116 2928 -2958 5 1054 4304 8 0 2 chr13 61567614 61568093 -58716219 + L1Md_T LINE L1 6105 6582 0 5 1054 33113 45 2 9 chr13 61568093 61570791 -58713521 + L1Md_T LINE L1 2929 5589 -297 5 1054 8259 40 7 0 chr13 61570791 61571779 -58712533 + L1Md_T LINE L1 5590 6584 -1 5 1054 896 157 0 6 chr13 61571806 61571973 -58712339 + GA-rich Low_complexity Low_complexity 3 168 0 5 1054 978 258 57 2 chr13 61571978 61572321 -58711991 + Lx6 LINE L1 7052 7402 -58 5 1054 308 348 16 16 chr13 61573488 61573675 -58710637 - Lx7 LINE L1 -620 7076 6890 6 1054 516 116 0 0 chr13 61573828 61573914 -58710398 + (TC)n Simple_repeat Simple_repeat 1 86 0 6 1054 291 71 0 0 chr13 61574449 61574491 -58709821 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1054 987 151 5 61 chr13 61574840 61575038 -58709274 - B2_Mm2 SINE B2 -8 187 1 6 1054 688 200 79 13 chr13 61576548 61576700 -58707612 - Lx LINE L1 -205 6449 6288 6 1054 1068 109 5 45 chr13 61576701 61576902 -58707410 + Lx LINE L1 6461 6653 -1 6 1054 802 121 50 0 chr13 61577259 61577400 -58706912 + L1Md_F2 LINE L1 6408 6555 -27 6 1054 1191 197 22 28 chr13 61577401 61577719 -58706593 + L1_Mur2 LINE L1 2819 3134 -2743 6 1054 2153 174 20 43 chr13 61577723 61578233 -58706079 + L1_Mur2 LINE L1 3445 3942 -1935 6 1054 721 193 30 0 chr13 61578232 61578398 -58705914 + L1_Mur2 LINE L1 4219 4389 -1497 6 1054 2308 228 48 31 chr13 61578398 61578941 -58705371 + RLTR20B2 LTR ERVK 1 552 -8 6 1054 4857 255 35 4 chr13 61578956 61580207 -58704105 + Lx5 LINE L1 5756 7045 -5 6 1054 606 200 46 46 chr13 61580221 61580394 -58703918 + L1_Mur3 LINE L1 4438 4610 -1270 6 1054 803 228 46 0 chr13 61580392 61580589 -58703723 - L1VL2 LINE L1 -6078 257 52 7 1054 2859 129 30 78 chr13 61580589 61581126 -58703186 + Lx LINE L1 6138 6648 -6 7 1054 516 32 0 0 chr13 61581126 61581188 -58703124 + (GA)n Simple_repeat Simple_repeat 1 62 0 7 1054 1995 226 49 11 chr13 61581198 61581767 -58702545 + L1_Mur3 LINE L1 4596 5186 -694 6 1054 1511 235 64 34 chr13 61581767 61582339 -58701973 + RMER12 LTR ERVK 4 583 -1265 7 1054 1112 131 0 17 chr13 61582419 61582597 -58701715 + B2_Mm2 SINE B2 1 175 -20 7 1054 266 286 42 70 chr13 61582616 61582759 -58701553 + RLTR22_Mur LTR ERVK 609 747 -1101 7 1054 242 287 15 76 chr13 61582729 61582861 -58701451 + RMER12 LTR ERVK 567 690 -632 7 1054 378 0 0 0 chr13 61582971 61583013 -58701299 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1054 786 219 39 87 chr13 61583028 61583258 -58701054 + RMER12 LTR ERVK 998 1216 -106 7 1054 837 166 35 6 chr13 61583326 61583552 -58700760 + L1_Mur3 LINE L1 5176 5404 -473 6 1054 28231 28 1 0 chr13 61584292 61587811 -58696501 + L1Md_T LINE L1 2063 5585 -298 7 1054 8306 42 0 0 chr13 61587812 61588808 -58695504 + L1Md_T LINE L1 5587 6582 0 7 1054 201 154 0 0 chr13 61589217 61589256 -58695056 + A-rich Low_complexity Low_complexity 2 40 0 7 1054 535 112 20 0 chr13 61591989 61592087 -58692225 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 8 1054 1002 63 22 28 chr13 61592109 61592288 -58692024 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 8 1054 1455 58 21 5 chr13 61592329 61592758 -58691554 + (TAGA)n Simple_repeat Simple_repeat 1 436 0 8 1054 762 81 0 0 chr13 61592775 61592886 -58691426 + (GGGA)n Simple_repeat Simple_repeat 3 113 0 8 1054 312 308 36 4 chr13 61594272 61594503 -58689809 - L1MB3 LINE L1 -3 6180 5940 8 1054 826 208 60 11 chr13 61594660 61594845 -58689467 - ORR1B1 LTR MaLR 0 394 201 8 1054 356 360 71 75 chr13 61595535 61595959 -58688353 + MER31A LTR ERV1 59 480 -5 8 1054 194 329 190 0 chr13 61596429 61596566 -58687746 + MER5A DNA MER1_type 27 189 0 8 1054 1665 199 56 85 chr13 61596626 61597071 -58687241 + RMER4B LTR ERVK 1 432 -153 8 1054 778 162 0 0 chr13 61597071 61597207 -58687105 + Lx2B LINE L1 6780 6915 -85 8 1054 298 150 11 91 chr13 61597213 61597301 -58687011 + RMER4B LTR ERVK 505 585 0 8 1054 1168 334 81 18 chr13 61597682 61598451 -58685861 - Lx8 LINE L1 -204 7269 6453 8 1054 449 287 175 15 chr13 61599607 61599876 -58684436 - Lx8 LINE L1 -1102 6371 6060 8 1054 1338 277 28 11 chr13 61599900 61600437 -58683875 - Lx8 LINE L1 -1790 5906 5351 8 1054 777 268 14 0 chr13 61600630 61600839 -58683473 - B3 SINE B2 0 216 5 8 1054 547 99 0 24 chr13 61602053 61602136 -58682176 + B1_Mus2 SINE Alu 65 145 -2 9 1054 213 146 24 0 chr13 61602139 61602180 -58682132 + A-rich Low_complexity Low_complexity 2 43 0 9 1054 23 68 0 0 chr13 61602329 61602373 -58681939 + AT_rich Low_complexity Low_complexity 1 44 0 9 1054 340 349 33 27 chr13 61602378 61602528 -58681784 + B3 SINE B2 6 156 -60 9 1054 23 0 0 0 chr13 61603111 61603134 -58681178 + AT_rich Low_complexity Low_complexity 1 23 0 9 1054 21 0 0 0 chr13 61603408 61603429 -58680883 + AT_rich Low_complexity Low_complexity 1 21 0 9 131 535 136 82 0 chr13 61603791 61603901 -58680411 - L1Md_F2 LINE L1 0 6582 6464 9 1055 1122 258 109 11 chr13 61604377 61604753 -58679559 + Lx5 LINE L1 6638 7050 0 9 1055 562 259 103 43 chr13 61605319 61605553 -58678759 + RMER10B LTR ERVL 1 248 -150 9 1055 1051 66 0 7 chr13 61605610 61605748 -58678564 - B1_Mus1 SINE Alu 0 148 12 9 1055 773 228 18 23 chr13 61605751 61605922 -58678390 + RMER10B LTR ERVL 229 398 0 9 1055 303 214 20 233 chr13 61606542 61606688 -58677624 + MT2A LTR ERVL 41 155 -378 1 1055 1061 96 59 12 chr13 61606689 61606858 -58677454 - B2_Mm2 SINE B2 -4 191 15 1 1055 626 284 44 24 chr13 61606868 61607160 -58677152 + MT2A LTR ERVL 318 601 0 1 1055 13543 49 11 11 chr13 61608120 61610143 -58674169 + L1Md_F3 LINE L1 4071 6093 -491 1 1055 248 298 34 15 chr13 61612055 61612261 -58672051 + MMSAT4 Satellite Satellite 1 209 -1 1 1055 2058 268 10 12 chr13 61612944 61613457 -58670855 - RLTR11A LTR ERVK -13 515 4 1 1055 738 339 33 12 chr13 61613475 61613720 -58670592 - ORR1D2 LTR MaLR -60 310 61 1 1055 23 0 0 0 chr13 61613886 61613909 -58670403 + AT_rich Low_complexity Low_complexity 1 23 0 1 1055 1013 198 69 93 chr13 61614154 61614523 -58669789 - RMER16 LTR ERVK 0 533 1 1 1055 759 219 53 9 chr13 61616473 61616699 -58667613 + L1_Rod LINE L1 2003 2238 -3609 1 1055 711 258 30 3 chr13 61617070 61617490 -58666822 + L1_Mur3 LINE L1 983 1418 -4459 1 1055 30675 74 0 10 chr13 61617492 61622559 -58661753 + L1Md_F2 LINE L1 473 5589 -297 1 1055 7871 54 3 3 chr13 61622560 61623553 -58660759 + L1Md_F2 LINE L1 5591 6583 -2 1 1055 9101 127 19 12 chr13 61623579 61625648 -58658664 + L1_Mus3 LINE L1 4203 6298 -340 1 1055 1303 115 15 0 chr13 61626154 61626354 -58657958 + L1_Mus3 LINE L1 6284 6486 -152 1 1055 5442 18 0 0 chr13 61626349 61627005 -58657307 + L1Md_T LINE L1 4931 5586 -297 1 1055 8326 40 0 0 chr13 61627005 61628001 -58656311 + L1Md_T LINE L1 5587 6582 0 1 1055 847 92 65 13 chr13 61628002 61628156 -58656156 + L1_Mus4 LINE L1 6475 6636 0 1 1055 589 146 14 21 chr13 61628174 61628314 -58655998 + L1_Mur3 LINE L1 3804 3942 -1935 1 1055 888 164 0 0 chr13 61628313 61628484 -58655828 + L1_Mur3 LINE L1 4210 4380 -1497 1 1055 2041 239 57 30 chr13 61628484 61629010 -58655302 + RLTR20B2 LTR ERVK 1 540 -20 1 1055 4721 240 33 22 chr13 61629018 61630238 -58654074 + Lx5 LINE L1 5729 6961 -89 1 1055 23 0 0 0 chr13 61630307 61630330 -58653982 + AT_rich Low_complexity Low_complexity 1 23 0 1 1055 832 184 6 6 chr13 61630433 61630603 -58653709 + L1_Mur3 LINE L1 4440 4609 -1271 1 1055 886 202 45 5 chr13 61630603 61630802 -58653510 - L1VL2 LINE L1 -6077 258 52 1 1055 3033 129 46 14 chr13 61630802 61631299 -58653013 + Lx LINE L1 6138 6650 -4 1 1055 2413 211 23 10 chr13 61631305 61631881 -58652431 + L1_Mur3 LINE L1 4596 5178 -702 1 1055 754 200 7 33 chr13 61631886 61631918 -58652394 + RMER12 LTR ERVK 1 28 -1294 1 1055 2823 105 2 2 chr13 61631918 61632318 -58651994 + MTB LTR MaLR 1 400 0 1 1055 754 200 7 33 chr13 61632318 61632435 -58651877 + RMER12 LTR ERVK 29 146 -1176 1 1055 234 0 0 0 chr13 61632435 61632461 -58651851 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 1 1055 236 0 91 0 chr13 61633069 61633113 -58651199 + (TTTTG)n Simple_repeat Simple_repeat 4 51 0 1 1055 848 249 76 51 chr13 61633906 61634343 -58649969 + RMER12 LTR ERVK 134 583 -1265 1 1055 941 157 0 0 chr13 61634423 61634576 -58649736 + B2_Mm2 SINE B2 1 153 -42 1 1055 465 66 0 0 chr13 61634578 61634639 -58649673 + (CATA)n Simple_repeat Simple_repeat 2 62 0 1 1055 243 241 56 33 chr13 61634658 61634748 -58649564 + RLTR22_Mus LTR ERVK 616 707 -1101 1 1055 438 301 83 104 chr13 61634931 61635115 -58649197 + RMER12 LTR ERVK 960 1122 -200 1 1055 3102 73 0 24 chr13 61635115 61635538 -58648774 - L1Md_F2 LINE L1 -12 6570 6158 1 1055 483 266 36 52 chr13 61635538 61635679 -58648633 + RMER12 LTR ERVK 1092 1277 -45 1 1055 595 171 40 27 chr13 61635735 61635885 -58648427 + L1_Mur3 LINE L1 5178 5329 -551 1 1055 1153 89 0 0 chr13 61635891 61636037 -58648275 + B1_Mus2 SINE Alu 2 147 0 1 1055 1355 71 0 9 chr13 61636049 61636391 -58647921 + (GAA)n Simple_repeat Simple_repeat 1 338 0 1 1055 231 103 0 0 chr13 61637071 61637110 -58647202 + (GA)n Simple_repeat Simple_repeat 2 40 0 1 1055 285 118 0 0 chr13 61638830 61638881 -58645431 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1055 187 157 39 0 chr13 61641944 61641995 -58642317 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 1 1055 1197 32 19 0 chr13 61642006 61642164 -58642148 + (TAGA)n Simple_repeat Simple_repeat 3 163 0 1 1055 432 0 0 0 chr13 61642175 61642223 -58642089 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1055 577 58 23 0 chr13 61642737 61642823 -58641489 + L1_Mus2 LINE L1 6478 6565 -1 1 1055 246 116 0 0 chr13 61643704 61643747 -58640565 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1055 3237 194 35 5 chr13 61643772 61644399 -58639913 - RLTR17 LTR ERVK -46 646 1 1 1055 1469 193 81 20 chr13 61644816 61645160 -58639152 - ORR1B2 LTR MaLR 0 367 3 1 1055 902 72 0 45 chr13 61645208 61645340 -58638972 + B1_Mus2 SINE Alu 22 147 0 1 1055 22237 83 3 5 chr13 61646162 61649183 -58635129 + L1Md_F2 LINE L1 2327 5344 -539 1 1055 3454 33 0 0 chr13 61649183 61649579 -58634733 - MTA_Mm LTR MaLR 0 396 1 1 1055 22237 83 3 5 chr13 61649579 61649824 -58634488 + L1Md_F2 LINE L1 5345 5586 -297 1 1055 7084 86 11 14 chr13 61649824 61650818 -58633494 + L1Md_F2 LINE L1 5587 6577 -5 1 1055 642 109 18 0 chr13 61650822 61650932 -58633380 + L1_Mm LINE L1 5286 5397 -486 1 1055 2156 158 17 29 chr13 61651081 61651635 -58632677 - L1VL4 LINE L1 -2517 1042 492 1 1055 243 0 0 0 chr13 61652851 61652878 -58631434 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1055 439 365 66 20 chr13 61653186 61653491 -58630821 + MER31A LTR ERV1 15 333 -152 1 1055 1061 277 93 7 chr13 61654372 61654779 -58629533 + RMER10A LTR ERVL 1 442 0 1 1055 23848 124 12 20 chr13 61656178 61660798 -58623514 + L1Md_F2 LINE L1 1218 5580 -297 1 1055 7011 95 9 4 chr13 61660799 61661789 -58622523 + L1Md_F2 LINE L1 5588 6582 0 1 1055 1355 261 45 18 chr13 61661794 61662238 -58622074 + Lx5 LINE L1 5756 6211 -839 1 1055 2206 287 43 0 chr13 61662231 61662880 -58621432 + Lx5 LINE L1 6358 7034 -16 1 1055 828 174 6 12 chr13 61662913 61663082 -58621230 + L1_Mur3 LINE L1 4443 4610 -1270 1 1055 847 209 43 0 chr13 61663080 61663267 -58621045 - L1VL2 LINE L1 -6078 257 63 1 1055 3220 144 8 6 chr13 61663279 61663794 -58620518 + Lx LINE L1 6139 6654 0 1 1055 1937 253 27 4 chr13 61663795 61664350 -58619962 + L1_Mur3 LINE L1 4596 5163 -717 1 1055 1604 239 58 34 chr13 61664350 61664955 -58619357 + RMER12 LTR ERVK 2 808 -596 1 1055 994 116 0 0 chr13 61665003 61665150 -58619162 + B2_Mm2 SINE B2 1 147 -48 1 1055 330 115 0 0 chr13 61665155 61665207 -58619105 + (CATA)n Simple_repeat Simple_repeat 1 52 0 1 1055 336 289 21 56 chr13 61665209 61665352 -58618960 + RLTR22_Mus LTR ERVK 616 753 -1055 1 1055 652 262 58 82 chr13 61665494 61665766 -58618546 + RMER12 LTR ERVK 960 1278 -44 1 1055 830 169 11 26 chr13 61665815 61666004 -58618308 + L1_Mur3 LINE L1 5172 5357 -523 1 1055 237 139 0 0 chr13 61667151 61667194 -58617118 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1055 198 103 0 0 chr13 61668460 61668489 -58615823 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1055 373 170 48 0 chr13 61670454 61670619 -58613693 + (TAGA)n Simple_repeat Simple_repeat 2 174 0 1 1055 3512 189 45 14 chr13 61671980 61672649 -58611663 - RLTR17 LTR ERVK -2 690 1 1 1055 254 312 84 18 chr13 61672683 61672908 -58611404 - L1MB3 LINE L1 -3 6180 5941 1 1055 1583 194 73 42 chr13 61673066 61673422 -58610890 - ORR1B2 LTR MaLR 0 367 1 1 1055 577 252 47 0 chr13 61674746 61674873 -58609439 + ETnERV2-int LTR ERVK 7070 7202 -204 1 1055 311 227 40 30 chr13 61675402 61675502 -58608810 + Lx7 LINE L1 7595 7695 -1 1 1055 476 202 29 0 chr13 61675511 61675615 -58608697 - ORR1B2-int LTR MaLR -103 1267 1161 1 1055 4312 50 0 0 chr13 61675615 61676097 -58608215 + LTRIS_Mm LTR ERV1 1 482 0 1 1055 19168 133 55 48 chr13 61676097 61679928 -58604384 + MuRRS-int LTR ERV1 1 4092 -598 1 1055 6438 24 12 0 chr13 61679926 61680650 -58603662 + MERVL-int LTR ERVL 2039 2771 -2714 1 1055 4435 56 0 15 chr13 61680676 61681218 -58603094 + MuRRS-int LTR ERV1 4157 4690 0 1 1055 4255 48 2 2 chr13 61681218 61681700 -58602612 + LTRIS_Mm LTR ERV1 1 482 0 1 1055 1421 246 78 14 chr13 61681700 61682059 -58602253 - ORR1B2-int LTR MaLR -206 1164 783 1 1055 2445 169 26 34 chr13 61683766 61684343 -58599969 - L1VL4 LINE L1 -2548 1011 441 1 1055 1181 95 0 0 chr13 61685110 61685257 -58599055 + B1_Mus1 SINE Alu 2 148 0 1 1055 980 249 13 23 chr13 61686789 61687093 -58597219 + L1VL1 LINE L1 1 301 -6121 1 1055 367 245 0 0 chr13 61687082 61687176 -58597136 + L1Md_F LINE L1 235 328 -6191 1 1055 567 233 0 0 chr13 61687173 61687293 -58597019 + L1Md_A LINE L1 306 425 -6191 1 1055 241 186 0 0 chr13 61687291 61687334 -58596978 + L1Md_A LINE L1 587 629 -5987 1 1055 34506 52 1 7 chr13 61687332 61691939 -58592373 + L1Md_A LINE L1 928 5495 -388 1 1055 828 145 19 0 chr13 61691939 61692098 -58592214 + GA-rich Low_complexity Low_complexity 1 162 0 1 1055 848 56 1 2 chr13 61692098 61692206 -58592106 + L1Md_F3 LINE L1 5442 5580 -303 1 1055 8308 45 14 1 chr13 61692207 61693179 -58591133 + L1Md_F3 LINE L1 5598 6582 -2 1 1055 645 262 73 5 chr13 61693186 61693378 -58590934 - Lx9 LINE L1 -1151 6493 6289 1 1055 1442 182 62 54 chr13 61693748 61694084 -58590228 - L1VL4 LINE L1 -5510 792 454 1 1055 3525 46 2 0 chr13 61694697 61695092 -58589220 - MTA_Mm LTR MaLR 0 396 1 1 1055 22 35 0 0 chr13 61695221 61695250 -58589062 + AT_rich Low_complexity Low_complexity 1 29 0 1 1055 475 346 70 53 chr13 61695922 61696337 -58587975 + MER31A LTR ERV1 59 480 -5 1 1055 202 319 180 6 chr13 61696783 61696944 -58587368 + MER5A DNA MER1_type 1 189 0 1 1055 2462 207 30 95 chr13 61697005 61697629 -58586683 + RMER4B LTR ERVK 2 585 0 1 1055 1120 332 63 93 chr13 61697984 61698414 -58585898 - Lx8 LINE L1 -181 7292 6845 1 1055 7943 54 11 11 chr13 61698414 61699356 -58584956 + L1Md_F2 LINE L1 5619 6557 -25 1 1055 1118 68 0 46 chr13 61699356 61699509 -58584803 + B1_Mus2 SINE Alu 1 146 -1 1 1055 7943 54 11 11 chr13 61699509 61699529 -58584783 + L1Md_F2 LINE L1 6558 6580 -2 1 1055 1120 332 63 93 chr13 61699529 61699960 -58584352 - Lx8 LINE L1 -629 6844 6457 1 1055 279 0 0 0 chr13 61701080 61701111 -58583201 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1055 564 295 194 11 chr13 61701496 61701774 -58582538 - Lx8 LINE L1 -1058 6415 6087 1 1055 1412 303 25 42 chr13 61701802 61701886 -58582426 - Lx8 LINE L1 -1565 5908 5822 1 1055 1093 82 0 7 chr13 61701886 61702021 -58582291 + B1_Mus2 SINE Alu 3 136 -11 1 1055 456 35 0 0 chr13 61702021 61702079 -58582233 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 1 1055 1412 294 29 29 chr13 61702079 61702547 -58581765 - Lx8 LINE L1 -59 5821 5351 1 1055 704 289 25 10 chr13 61702731 61702934 -58581378 - B3 SINE B2 -1 215 10 1 1055 408 191 0 0 chr13 61702965 61703049 -58581263 + (TA)n Simple_repeat Simple_repeat 2 85 0 1 1055 7629 94 16 6 chr13 61703532 61705000 -58579312 + L1_Mus3 LINE L1 5139 6626 -12 1 1055 434 96 0 14 chr13 61705834 61705908 -58578404 + (TG)n Simple_repeat Simple_repeat 2 74 0 1 1055 298 344 39 22 chr13 61706329 61706474 -58577838 + B3 SINE B2 6 154 -44 1 1055 373 19 18 18 chr13 61706508 61706563 -58577749 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 1 1055 1194 65 0 0 chr13 61706563 61706702 -58577610 - B1_Mus1 SINE Alu -9 139 1 1 1055 1457 210 92 72 chr13 61707873 61708041 -58576271 + RMER10B LTR ERVL 1 200 -198 1 1055 477 0 0 0 chr13 61708041 61708094 -58576218 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1055 441 0 0 0 chr13 61708094 61708142 -58576170 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1055 1457 210 92 72 chr13 61708142 61708362 -58575950 + RMER10B LTR ERVL 201 397 -1 1 1055 829 109 0 4 chr13 61708812 61708947 -58575365 - L1_Mus2 LINE L1 0 6582 6446 1 1055 560 143 0 0 chr13 61708942 61709036 -58575276 - L1_Mus2 LINE L1 -70 6497 6404 1 1055 1022 90 65 12 chr13 61709344 61709513 -58574799 - B2_Mm2 SINE B2 -3 192 15 1 1055 491 273 48 107 chr13 61709511 61709802 -58574510 + MT2B2 LTR ERVL 311 584 0 1 1055 506 228 54 23 chr13 61710967 61711097 -58573215 + RMER10A LTR ERVL 1 134 -308 1 1055 366 271 32 48 chr13 61711184 61711308 -58573004 + RMER10A LTR ERVL 259 380 -62 1 1055 388 74 19 0 chr13 61711472 61711526 -58572786 - RLTR1B-int LTR ERV1 -3244 55 1 2 1055 803 128 3 24 chr13 61711526 61711674 -58572638 - RLTR1 LTR ERV1 0 624 366 2 1055 591 303 24 48 chr13 61711675 61711966 -58572346 + MuRRS4-int LTR ERV1 180 463 -4600 2 1055 411 163 120 0 chr13 61711960 61712052 -58572260 + RMER16-int LTR ERVK 228 330 -5076 2 1055 433 93 48 10 chr13 61712056 61712134 -58572178 + MuRRS4-int LTR ERV1 394 444 -2855 2 1055 228 83 0 0 chr13 61712141 61712177 -58572135 + LTRIS2 LTR ERV1 290 325 -239 2 1055 19101 81 18 3 chr13 61712187 61715297 -58569015 - L1Md_F LINE L1 -2131 3752 594 2 1055 180 111 0 0 chr13 61715321 61715348 -58568964 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2 1055 23 54 0 0 chr13 61716546 61716583 -58567729 + AT_rich Low_complexity Low_complexity 1 37 0 2 1055 552 261 117 17 chr13 61716600 61716779 -58567533 + B3 SINE B2 9 205 -11 2 1055 233 255 36 89 chr13 61716862 61716974 -58567338 + MT2B LTR ERVL 24 129 -404 2 1055 474 275 60 104 chr13 61716945 61717338 -58566974 + MT2B LTR ERVL 70 601 0 2 1055 304 273 11 33 chr13 61717899 61717990 -58566322 + RLTR23 LTR ERV1 311 399 -31 2 1055 306 171 0 0 chr13 61718241 61718311 -58566001 + GA-rich Low_complexity Low_complexity 2 71 0 2 1055 311 280 9 0 chr13 61718330 61718437 -58565875 + GA-rich Low_complexity Low_complexity 3 110 0 2 1055 288 0 0 0 chr13 61719043 61719075 -58565237 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 1055 1181 45 0 0 chr13 61719075 61719209 -58565103 - B1_Mm SINE Alu -13 134 1 2 1055 1115 89 0 0 chr13 61719221 61719367 -58564945 - B1_Mus1 SINE Alu -1 147 2 2 1055 1204 22 0 42 chr13 61720561 61720704 -58563608 + B1_Mm SINE Alu 2 138 -9 2 1055 725 261 198 13 chr13 61722562 61722935 -58561377 + RMER10A LTR ERVL 1 442 0 2 1055 246 274 168 34 chr13 61724104 61724273 -58560039 + B3 SINE B2 9 191 -7 2 1055 495 362 73 46 chr13 61725104 61725431 -58558881 + MTD LTR MaLR 18 353 -66 2 1055 7538 63 2 1 chr13 61725676 61726888 -58557424 + L1_Mus1 LINE L1 5352 6563 -4 2 1055 1603 337 80 54 chr13 61726901 61728071 -58556241 + ORR1D2-int LTR MaLR 164 1363 -7 2 1055 199 0 65 0 chr13 61728115 61728146 -58556166 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 1055 872 105 0 0 chr13 61728146 61728270 -58556042 - B1_Mus1 SINE Alu -24 124 1 2 1055 397 299 124 66 chr13 61728287 61728513 -58555799 + ORR1D2 LTR MaLR 43 281 -89 2 1055 270 331 40 81 chr13 61728590 61728738 -58555574 - B1_Mus2 SINE Alu 0 147 6 2 1055 463 362 10 41 chr13 61728945 61729141 -58555171 - B3 SINE B2 0 216 27 2 1055 2097 238 88 8 chr13 61729143 61729233 -58555079 - RLTR20D LTR ERVK 0 568 467 2 1055 381 58 0 0 chr13 61729233 61729285 -58555027 + (CA)n Simple_repeat Simple_repeat 1 52 0 2 1055 2097 238 88 8 chr13 61729285 61729719 -58554593 - RLTR20D LTR ERVK -102 466 3 2 1055 3322 217 13 6 chr13 61729810 61730603 -58553709 + MurSatRep1 Unknown Unknown 5 802 -1335 2 1055 2433 249 60 16 chr13 61730625 61731432 -58552880 + MurSatRep1 Unknown Unknown 1208 2049 -88 2 1055 350 324 23 18 chr13 61731537 61731774 -58552538 + MurSatRep1 Unknown Unknown 1843 2049 -88 2 1055 329 281 22 22 chr13 61731715 61731853 -58552459 + MMSAT4 Satellite Satellite 31 168 0 2 1055 366 328 28 25 chr13 61731822 61731883 -58552429 + MurSatRep1 Unknown Unknown 1832 1918 -219 2 1055 457 279 0 0 chr13 61731883 61732105 -58552207 + MMSAT4 Satellite Satellite 1 222 0 2 1055 366 328 28 25 chr13 61732105 61732194 -58552118 + MurSatRep1 Unknown Unknown 1919 2049 -88 2 1055 247 263 21 21 chr13 61732139 61732236 -58552076 + MMSAT4 Satellite Satellite 35 131 -37 2 1055 464 309 43 22 chr13 61732239 61732378 -58551934 + ETnERV2-int LTR ERVK 7061 7202 -204 2 1055 302 282 38 15 chr13 61732936 61733069 -58551243 + RLTR45-int LTR ERVK 169 304 -6940 2 1055 1190 215 100 88 chr13 61733276 61733738 -58550574 + RLTR45-int LTR ERVK 241 623 -4783 2 1055 304 267 0 55 chr13 61733888 61733979 -58550333 + RLTR45-int LTR ERVK 2454 2539 -4867 2 1055 560 227 0 0 chr13 61733991 61734110 -58550202 + RLTR45-int LTR ERVK 2635 2753 -4653 2 131 4894 189 62 92 chr13 61734145 61736024 -58548288 + RLTR45-int LTR ERVK 3539 5907 -1337 2 1056 807 293 10 0 chr13 61736047 61736348 -58547964 + ETnERV2-int LTR ERVK 7506 7743 -474 2 1056 3791 182 24 14 chr13 61736396 61737099 -58547213 + ETnERV2-int LTR ERVK 6493 7202 -204 2 1056 532 270 4 2 chr13 61737372 61737705 -58546607 + MMSAT4 Satellite Satellite 1 333 0 2 1056 9406 63 2 21 chr13 61737702 61739795 -58544517 + L1Md_A LINE L1 445 2491 -3392 2 1056 2744 42 0 0 chr13 61739853 61740188 -58544124 - L1Md_A LINE L1 0 6582 6248 2 1056 375 167 0 0 chr13 61740416 61740494 -58543818 + Lx2 LINE L1 6912 6989 -8 2 1056 804 211 5 11 chr13 61740648 61740865 -58543447 - RMER17C LTR ERVK 0 410 1 2 1056 1047 109 0 0 chr13 61740892 61741039 -58543273 + B1_Mus1 SINE Alu 1 147 -1 2 1056 291 172 51 0 chr13 61741197 61741278 -58543034 + B1_Mus2 SINE Alu 32 147 0 2 1056 962 121 102 35 chr13 61741324 61741521 -58542791 - MTA_Mm LTR MaLR -186 210 1 2 1056 261 83 0 0 chr13 61741902 61741938 -58542374 + (CCA)n Simple_repeat Simple_repeat 1 36 0 2 1056 2963 34 6 0 chr13 61742262 61742619 -58541693 + MTA_Mm LTR MaLR 38 396 0 2 1056 291 259 11 80 chr13 61742619 61742707 -58541605 + B3A SINE B2 117 198 0 2 1056 281 265 58 19 chr13 61742774 61742878 -58541434 + MT2B LTR ERVL 22 129 -404 2 1056 522 260 99 111 chr13 61742901 61743225 -58541087 + MT2B LTR ERVL 280 599 -2 2 1056 251 230 40 0 chr13 61744045 61744119 -58540193 + GA-rich Low_complexity Low_complexity 2 78 0 2 1056 824 135 7 0 chr13 61744129 61744277 -58540035 + (GGA)n Simple_repeat Simple_repeat 2 150 0 2 1056 545 313 23 10 chr13 61746342 61746371 -58537941 - L1_Mur1 LINE L1 -3304 2836 2804 2 1056 1074 155 55 5 chr13 61746371 61746572 -58537740 - Lx3A LINE L1 -2 6979 6769 2 1056 5550 113 204 79 chr13 61746572 61747729 -58536583 - L1_Mur1 LINE L1 -3337 2803 1446 2 1056 212 0 0 35 chr13 61747729 61747758 -58536554 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1056 979 91 45 0 chr13 61747762 61747894 -58536418 - B1_Mus1 SINE Alu -10 138 1 2 1056 5550 119 179 74 chr13 61747894 61748183 -58536129 - L1_Mur1 LINE L1 -4441 1445 1189 2 1056 1139 88 0 0 chr13 61748183 61748330 -58535982 - B1_Mm SINE Alu 0 147 1 2 1056 5053 148 61 49 chr13 61748330 61749268 -58535044 - L1_Mur1 LINE L1 -5796 1188 209 2 1056 376 262 139 0 chr13 61751954 61752090 -58532222 + B3A SINE B2 52 205 -11 2 1056 361 357 85 5 chr13 61752809 61753020 -58531292 + MTD LTR MaLR 35 262 -157 2 1056 7369 175 5 10 chr13 61753088 61755177 -58529135 - Lx2 LINE L1 0 6997 4921 2 1056 967 215 0 0 chr13 61755176 61755376 -58528936 + L1VL2 LINE L1 66 265 -6070 2 1056 7260 222 27 50 chr13 61755437 61755530 -58528782 + MurSatRep1 Unknown Unknown 1 72 -2065 2 1056 1345 64 17 6 chr13 61755530 61755704 -58528608 + B2_Mm2 SINE B2 2 177 -18 2 1056 7260 222 27 50 chr13 61755704 61755899 -58528413 + MurSatRep1 Unknown Unknown 73 250 -1887 2 1056 959 143 0 26 chr13 61755899 61755911 -58528401 - B1_Mus2 SINE Alu 0 147 139 2 1056 321 26 0 0 chr13 61755911 61755949 -58528363 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 2 1056 959 143 0 26 chr13 61755949 61756087 -58528225 - B1_Mus2 SINE Alu -9 138 1 2 1056 7260 222 27 50 chr13 61756087 61756291 -58528021 + MurSatRep1 Unknown Unknown 251 439 -1698 2 1056 1095 153 16 5 chr13 61756291 61756481 -58527831 + B2_Mm2 SINE B2 2 193 -2 2 1056 7260 222 27 50 chr13 61756481 61758147 -58526165 + MurSatRep1 Unknown Unknown 440 2112 -25 2 1056 1015 172 5 25 chr13 61758148 61758345 -58525967 + B2_Mm1a SINE B2 1 193 0 2 1056 558 262 13 7 chr13 61758567 61759877 -58524435 + MMSAT4 Satellite Satellite 1 1317 0 2 1056 1134 95 0 0 chr13 61759901 61760049 -58524263 - B1_Mus1 SINE Alu 0 148 1 2 1056 258 56 0 0 chr13 61760324 61760360 -58523952 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1056 632 316 56 106 chr13 61761045 61761086 -58523226 - ORR1D2 LTR MaLR -1 369 330 2 1056 1745 264 23 25 chr13 61761086 61761615 -58522697 - RLTR11A LTR ERVK 0 528 1 2 1056 632 316 56 106 chr13 61761615 61761770 -58522542 - ORR1D2 LTR MaLR -41 329 188 2 1056 971 136 0 0 chr13 61761770 61761917 -58522395 + B1_Mus2 SINE Alu 1 147 0 2 1056 632 316 56 106 chr13 61761917 61762059 -58522253 - ORR1D2 LTR MaLR -183 187 47 2 1056 219 264 0 14 chr13 61763081 61763154 -58521158 + A-rich Low_complexity Low_complexity 3 74 0 2 1056 203 284 95 0 chr13 61763431 61763505 -58520807 - MIRb SINE MIR -84 184 104 2 1056 257 360 0 73 chr13 61763585 61763708 -58520604 + B1_Mus2 SINE Alu 1 114 -33 2 1056 27 29 0 0 chr13 61763939 61763973 -58520339 + AT_rich Low_complexity Low_complexity 1 34 0 2 1056 729 127 0 0 chr13 61765855 61765965 -58518347 + B1_Mus1 SINE Alu 39 148 0 2 1056 21 0 0 0 chr13 61765965 61765986 -58518326 + AT_rich Low_complexity Low_complexity 1 21 0 2 1056 780 136 121 29 chr13 61766125 61766259 -58518053 + B2_Mm1t SINE B2 3 156 -37 2 1056 441 0 0 0 chr13 61766259 61766308 -58518004 + (TAA)n Simple_repeat Simple_repeat 3 51 0 2 1056 780 136 121 29 chr13 61766308 61766347 -58517965 + B2_Mm1t SINE B2 157 192 -1 2 1056 254 223 0 21 chr13 61766981 61767077 -58517235 + GA-rich Low_complexity Low_complexity 2 95 0 2 1056 228 35 0 0 chr13 61769691 61769720 -58514592 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1056 7479 95 18 15 chr13 61769720 61770878 -58513434 - Lx3_Mus LINE L1 -65 6944 5783 2 1056 207 88 0 0 chr13 61770881 61770915 -58513397 + (TTTC)n Simple_repeat Simple_repeat 3 36 0 2 1056 3051 77 2 2 chr13 61770913 61771352 -58512960 - L1_Mus1 LINE L1 0 6567 6164 2 1056 1116 88 0 20 chr13 61771392 61771542 -58512770 - B1_Mm SINE Alu 0 147 1 2 1056 795 118 15 0 chr13 61771542 61771676 -58512636 - Lx3_Mus LINE L1 -371 5813 5678 2 1056 7331 69 2 2 chr13 61771738 61773298 -58511014 - L1Md_F2 LINE L1 -12 6570 5011 2 1056 1148 45 0 7 chr13 61773299 61773454 -58510858 + L1_Mm LINE L1 4688 4841 -1042 2 1056 31975 41 1 2 chr13 61773452 61777634 -58506678 + L1Md_F2 LINE L1 1410 5585 -298 2 1056 8545 46 1 2 chr13 61777635 61778619 -58505693 + L1Md_F2 LINE L1 5587 6569 -13 2 1056 3729 126 7 2 chr13 61778629 61779193 -58505119 + L1_Mm LINE L1 4987 5553 -330 2 1056 636 259 15 0 chr13 61779579 61779710 -58504602 - ETnERV2-int LTR ERVK -204 7202 7070 2 1056 7888 59 6 1 chr13 61779711 61780727 -58503585 + L1_Mus1 LINE L1 5548 6567 0 2 1056 580 323 104 33 chr13 61780866 61781173 -58503139 + ORR1D2-int LTR MaLR 120 448 -922 2 1056 1533 48 15 31 chr13 61781694 61781889 -58502423 + B2_Mm1a SINE B2 2 193 0 2 1056 706 103 259 0 chr13 61781913 61782029 -58502283 + B1_Mus1 SINE Alu 2 147 -1 2 1056 1032 352 64 67 chr13 61782080 61782754 -58501558 + ORR1D2-int LTR MaLR 559 1254 -116 2 1056 1112 110 0 0 chr13 61782754 61782900 -58501412 + B1_Mm SINE Alu 1 146 -1 2 1056 1032 352 64 67 chr13 61782900 61782922 -58501390 + ORR1D2-int LTR MaLR 1255 1255 -115 2 1056 675 46 0 0 chr13 61782922 61783009 -58501303 + (GA)n Simple_repeat Simple_repeat 2 88 0 2 1056 1032 352 64 67 chr13 61783009 61783118 -58501194 + ORR1D2-int LTR MaLR 1255 1363 -7 2 1056 275 338 84 62 chr13 61783149 61783376 -58500936 + ORR1D2 LTR MaLR 43 274 -96 2 1056 291 286 93 43 chr13 61783464 61783603 -58500709 - B1_Mus2 SINE Alu 0 147 2 2 1056 278 391 32 19 chr13 61783858 61784012 -58500300 - B3A SINE B2 -16 182 27 2 1056 1716 233 53 40 chr13 61784014 61784630 -58499682 - RLTR20D LTR ERVK 0 568 1 2 1056 2430 197 10 25 chr13 61784719 61784889 -58499423 + MurSatRep1 Unknown Unknown 1 169 -1968 2 1056 2955 77 141 139 chr13 61784889 61785400 -58498912 + RLTR1B LTR ERV1 1 512 0 2 1056 2430 200 122 18 chr13 61785400 61785885 -58498427 + MurSatRep1 Unknown Unknown 170 704 -1433 2 1056 821 70 0 0 chr13 61785881 61785981 -58498331 + L1_Mus2 LINE L1 6353 6452 -114 2 1056 2314 208 62 12 chr13 61785981 61786496 -58497816 + RLTR25B LTR ERVK 236 776 -252 2 1056 500 204 44 0 chr13 61786678 61786791 -58497521 + MusHAL1 LINE L1 1407 1524 -1188 3 1056 1381 188 26 4 chr13 61786776 61787048 -58497264 + L1_Mur2 LINE L1 5308 5585 -292 3 1056 1096 116 0 0 chr13 61787853 61787990 -58496322 + B1_Mus1 SINE Alu 2 138 -10 3 1056 272 0 0 73 chr13 61787990 61788031 -58496281 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 3 1056 1941 169 14 3 chr13 61788138 61788483 -58495829 - Lx2A1 LINE L1 -4 7004 6656 3 1056 3642 190 5 39 chr13 61789367 61790129 -58494183 - Lx2A1 LINE L1 -339 6669 5934 3 1056 2618 153 56 8 chr13 61790129 61790744 -58493568 + Lx2A1 LINE L1 5291 5953 -1055 3 1056 357 277 105 78 chr13 61791012 61791165 -58493147 - RMER12 LTR ERVK 0 1322 1166 3 1056 360 0 0 0 chr13 61791263 61791303 -58493009 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1056 1088 69 8 0 chr13 61791303 61791433 -58492879 - B1_Mus1 SINE Alu -15 133 3 3 1056 1406 218 159 18 chr13 61791433 61791819 -58492493 - RMER12 LTR ERVK -882 440 1 3 1056 1781 199 17 6 chr13 61791825 61792174 -58492138 - Lx4B LINE L1 -247 6811 6459 3 1056 2680 198 21 2 chr13 61792208 61792730 -58491582 + MurSatRep1 Unknown Unknown 484 1015 -1122 3 1056 3341 95 7 16 chr13 61792764 61793214 -58491098 - L1_Mus3 LINE L1 0 6638 6193 3 1056 4702 134 4 1 chr13 61793214 61793961 -58490351 - L1_Mur2 LINE L1 -1532 4345 3597 3 1056 4615 223 22 14 chr13 61793963 61795077 -58489235 + MurSatRep1 Unknown Unknown 1003 2126 -11 3 1056 227 356 22 0 chr13 61795204 61795339 -58488973 + MMSAT4 Satellite Satellite 31 168 0 3 1056 35947 65 9 2 chr13 61795363 61801478 -58482834 - L1Md_F2 LINE L1 -12 6570 476 3 1056 406 346 33 19 chr13 61801506 61801721 -58482591 + MurSatRep1 Unknown Unknown 1832 2049 -88 3 1056 534 266 18 18 chr13 61801662 61802383 -58481929 + MMSAT4 Satellite Satellite 1 721 0 3 1056 229 339 48 67 chr13 61802160 61802476 -58481836 + MurSatRep1 Unknown Unknown 1739 2048 -89 3 1056 874 241 44 0 chr13 61803120 61803323 -58480989 - RLTR11A LTR ERVK 0 528 317 3 1056 21 57 0 0 chr13 61804799 61804834 -58479478 + AT_rich Low_complexity Low_complexity 1 35 0 3 1056 1877 131 91 0 chr13 61805437 61805734 -58478578 + ORR1A2 LTR MaLR 1 324 -3 3 1056 1126 133 61 0 chr13 61805850 61806031 -58478281 - B2_Mm1t SINE B2 0 193 2 3 1056 2557 241 22 18 chr13 61806259 61806858 -58477454 - Lx5 LINE L1 -135 6915 6315 3 1056 396 0 0 0 chr13 61806861 61806905 -58477407 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 3 1056 408 192 52 35 chr13 61806905 61807078 -58477234 - RMER17C LTR ERVK -137 273 98 3 1056 3646 223 40 7 chr13 61807093 61808278 -58476034 - Lx5 LINE L1 -725 6325 5086 3 1056 1328 107 45 0 chr13 61808299 61808477 -58475835 - B2_Mm2 SINE B2 -8 187 2 3 1056 277 312 0 25 chr13 61809005 61809084 -58475228 + RSINE1 SINE B4 5 81 -84 3 1056 417 306 15 15 chr13 61809519 61809655 -58474657 + B1_Mus1 SINE Alu 11 146 -2 3 1056 582 15 0 0 chr13 61810505 61810572 -58473740 + (TTC)n Simple_repeat Simple_repeat 3 69 0 3 1056 1198 110 29 11 chr13 61810572 61810747 -58473565 - B2_Mm2 SINE B2 -15 180 3 3 1056 266 158 70 0 chr13 61811006 61811063 -58473249 - MIRc SINE MIR -102 166 106 3 1056 1153 88 7 0 chr13 61811345 61811492 -58472820 + B1_Mus1 SINE Alu 1 148 0 3 1056 748 111 86 0 chr13 61811650 61811767 -58472545 - B1_Mus2 SINE Alu 0 147 21 3 1056 329 303 80 95 chr13 61812352 61812677 -58471635 + RLTR46 LTR ERVK 1 320 0 3 1056 314 296 83 0 chr13 61812949 61813057 -58471255 - ID_B1 SINE B4 -10 214 98 3 1056 361 318 71 129 chr13 61813396 61813736 -58470576 + MT2B LTR ERVL 282 601 0 3 1056 513 231 80 40 chr13 61814522 61814698 -58469614 - RLTR22_Mur LTR ERVK 0 1848 1666 3 1056 527 268 75 122 chr13 61814917 61815291 -58469021 + MT2B LTR ERVL 40 531 -70 3 1056 297 0 0 0 chr13 61815291 61815324 -58468988 + (T)n Simple_repeat Simple_repeat 1 33 0 3 1056 1222 68 0 0 chr13 61815324 61815471 -58468841 - B1_Mus2 SINE Alu 0 147 1 3 1056 306 290 117 58 chr13 61816347 61816501 -58467811 + HAL1-3A_ME LINE L1 2273 2435 -423 3 1056 180 0 0 0 chr13 61818193 61818213 -58466099 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1056 1106 92 7 7 chr13 61818213 61818348 -58465964 - B1_Mus2 SINE Alu -11 136 1 3 1056 969 125 0 7 chr13 61818578 61818715 -58465597 + B1_Mus2 SINE Alu 1 136 -11 3 1056 309 26 0 0 chr13 61818715 61818753 -58465559 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 3 1056 321 235 47 12 chr13 61818838 61818924 -58465388 + MT2B LTR ERVL 41 129 -404 3 1056 437 307 51 96 chr13 61818949 61819284 -58465028 + MT2B LTR ERVL 282 601 0 3 1056 218 32 0 31 chr13 61819565 61819597 -58464715 + (GGA)n Simple_repeat Simple_repeat 1 31 0 3 1056 810 260 60 24 chr13 61820065 61820313 -58463999 - RLTR22_Mur LTR ERVK 0 1848 1592 3 1056 1087 168 26 0 chr13 61820471 61820662 -58463650 - RLTR22_Mur LTR ERVK -240 1608 1413 3 1056 496 183 0 19 chr13 61821423 61821529 -58462783 - Lx4A LINE L1 -2 7056 6953 3 1056 278 237 52 13 chr13 61822085 61822162 -58462150 + ORR1D1 LTR MaLR 295 374 0 3 1056 225 288 57 69 chr13 61823607 61823782 -58460530 + RMER2 LTR ERV1 368 540 -27 3 1056 2227 117 19 0 chr13 61824276 61824592 -58459720 + L1_Mus3 LINE L1 6313 6634 -4 3 1056 186 43 0 0 chr13 61826300 61826323 -58457989 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1056 319 179 0 0 chr13 61826659 61826715 -58457597 - MTB LTR MaLR 0 400 345 3 1056 242 146 18 35 chr13 61828042 61828099 -58456213 - Lx4B LINE L1 -191 6867 6812 3 1056 714 223 16 64 chr13 61828099 61828286 -58456026 - RMER12 LTR ERVK 0 1322 1145 3 1056 226 308 74 33 chr13 61828586 61828707 -58455605 - RMER12 LTR ERVK -131 1191 1066 3 1056 186 43 0 0 chr13 61828733 61828756 -58455556 + (GGAGA)n Simple_repeat Simple_repeat 2 24 0 3 1056 498 108 0 0 chr13 61828814 61828888 -58455424 + (TGGA)n Simple_repeat Simple_repeat 1 74 0 3 1056 1003 143 0 13 chr13 61829070 61829212 -58455100 + B1_Mus1 SINE Alu 1 141 -7 3 1056 393 22 0 0 chr13 61829212 61829258 -58455054 + (CAAAA)n Simple_repeat Simple_repeat 5 50 0 3 1056 653 139 0 0 chr13 61830265 61830366 -58453946 + B1_Mus2 SINE Alu 47 147 0 3 1056 233 75 25 0 chr13 61830390 61830430 -58453882 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1056 26715 68 8 2 chr13 61830431 61836592 -58447720 - L1Md_F2 LINE L1 -12 6570 375 3 1056 1005 96 0 0 chr13 61836592 61836727 -58447585 + B1_Mus1 SINE Alu 14 148 0 3 1056 231 61 0 0 chr13 61836729 61836762 -58447550 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 3 1056 265 284 68 0 chr13 61836882 61836956 -58447356 - ID_B1 SINE B4 -9 215 137 3 1056 347 327 4 91 chr13 61837218 61837258 -58447054 + MT2B LTR ERVL 40 70 -463 3 1056 237 83 0 0 chr13 61837258 61837294 -58447018 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1056 1057 99 0 0 chr13 61837298 61837440 -58446872 - B1_Mus2 SINE Alu -5 142 1 3 1056 412 267 69 112 chr13 61837440 61837821 -58446491 + MT2B LTR ERVL 71 599 -2 3 1056 341 285 139 2 chr13 61838118 61838262 -58446050 + B3A SINE B2 43 205 -11 3 1056 284 376 114 20 chr13 61838971 61839226 -58445086 + MTD LTR MaLR 18 296 -123 3 1056 7471 163 9 33 chr13 61839255 61841202 -58443110 - Lx2 LINE L1 0 6997 5090 3 1056 3054 47 42 0 chr13 61841202 61841582 -58442730 + MTA_Mm LTR MaLR 1 396 0 3 1056 4767 174 19 7 chr13 61841582 61841753 -58442559 - Lx2 LINE L1 -794 5089 4921 3 1056 1008 212 5 0 chr13 61841738 61841950 -58442362 + L1VL2 LINE L1 53 265 -6070 3 1056 7183 220 31 46 chr13 61842011 61842104 -58442208 + MurSatRep1 Unknown Unknown 1 76 -2061 3 1056 1030 107 64 12 chr13 61842104 61842275 -58442037 + B2_Mm2 SINE B2 2 181 -14 3 1056 7183 220 31 46 chr13 61842275 61842451 -58441861 + MurSatRep1 Unknown Unknown 77 250 -1887 3 1056 345 24 0 0 chr13 61842451 61842493 -58441819 + (GTTTG)n Simple_repeat Simple_repeat 2 43 0 3 1056 1034 104 0 0 chr13 61842496 61842631 -58441681 - B1_Mus2 SINE Alu -12 135 1 3 1056 7183 220 31 46 chr13 61842631 61842834 -58441478 + MurSatRep1 Unknown Unknown 251 424 -1713 3 1056 979 165 26 5 chr13 61842834 61843023 -58441289 + B2_Mm2 SINE B2 2 194 -1 3 1056 7183 220 31 46 chr13 61843023 61844677 -58439635 + MurSatRep1 Unknown Unknown 425 2101 -36 3 1056 1017 177 5 25 chr13 61844691 61844888 -58439424 + B2_Mm1a SINE B2 1 193 0 3 1056 228 355 25 50 chr13 61844932 61845172 -58439140 + MurSatRep1 Unknown Unknown 1810 2043 -94 3 1056 531 270 4 3 chr13 61845107 61847182 -58437130 + MMSAT4 Satellite Satellite 1 2076 0 3 1056 192 40 0 0 chr13 61847465 61847490 -58436822 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 1056 739 297 50 92 chr13 61848168 61848209 -58436103 - ORR1D2 LTR MaLR -1 369 330 3 1056 1405 264 62 31 chr13 61848209 61848721 -58435591 - RLTR11A LTR ERVK 0 528 1 3 1056 739 297 50 92 chr13 61848721 61848876 -58435436 - ORR1D2 LTR MaLR -41 329 172 3 1056 1023 112 0 0 chr13 61848876 61849019 -58435293 + B1_Mus2 SINE Alu 1 143 -4 3 1056 315 0 0 0 chr13 61849019 61849054 -58435258 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1056 739 297 50 92 chr13 61849054 61849192 -58435120 - ORR1D2 LTR MaLR -199 171 48 3 1056 345 177 0 0 chr13 61850124 61850193 -58434119 + T-rich Low_complexity Low_complexity 28 96 0 3 1056 920 137 7 0 chr13 61850193 61850339 -58433973 - B1_Mm SINE Alu 0 147 1 3 1056 345 177 0 0 chr13 61850339 61850365 -58433947 + T-rich Low_complexity Low_complexity 2 27 0 3 1056 1086 66 0 0 chr13 61850376 61850513 -58433799 - B1_Mm SINE Alu -10 137 1 3 1056 257 360 0 73 chr13 61851117 61851240 -58433072 + B1_Mus2 SINE Alu 1 114 -33 3 1056 198 0 0 0 chr13 61852410 61852432 -58431880 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 3 1056 1027 62 23 0 chr13 61852432 61852561 -58431751 - B1_Mus2 SINE Alu -11 136 5 3 1056 1219 113 11 0 chr13 61853244 61853421 -58430891 + B2_Mm1t SINE B2 2 180 -13 3 1056 474 240 87 0 chr13 61854644 61854748 -58429564 - B3 SINE B2 -103 113 1 3 1056 209 132 0 26 chr13 61854764 61854803 -58429509 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 3 1056 1028 95 7 20 chr13 61854806 61854956 -58429356 - B1_Mus1 SINE Alu 0 148 1 3 1056 646 351 56 0 chr13 61854993 61855281 -58429031 + MTE-int LTR MaLR 1037 1340 -240 3 1056 414 256 15 159 chr13 61855442 61855637 -58428675 - RLTR18 LTR ERVK -402 214 48 3 1056 271 213 61 41 chr13 61855613 61855711 -58428601 + MT2A LTR ERVL 434 533 0 3 1056 1216 41 7 0 chr13 61856471 61856617 -58427695 - B1_Mus2 SINE Alu 0 147 1 4 1056 258 246 15 8 chr13 61856748 61856879 -58427433 + GA-rich Low_complexity Low_complexity 3 134 0 4 1056 182 91 0 29 chr13 61856892 61856926 -58427386 + (GGA)n Simple_repeat Simple_repeat 2 34 0 4 1056 7428 96 13 33 chr13 61857484 61858608 -58425704 - Lx3_Mus LINE L1 0 7009 5908 4 1056 1148 154 0 25 chr13 61858612 61858654 -58425658 - B2_Mm2 SINE B2 0 195 159 4 1056 342 0 0 0 chr13 61858654 61858692 -58425620 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 4 1056 1148 154 0 25 chr13 61858692 61858849 -58425463 - B2_Mm2 SINE B2 -37 158 2 4 1056 340 74 0 0 chr13 61858849 61858902 -58425410 - Lx3_Mus LINE L1 -1146 5904 5852 4 1056 4127 77 0 7 chr13 61858901 61859479 -58424833 - Lx3_Mus LINE L1 0 5886 5313 4 1056 1309 176 58 4 chr13 61859490 61859764 -58424548 - L1_Mur1 LINE L1 -6348 634 346 4 1056 238 0 53 26 chr13 61860048 61860086 -58424226 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1056 1190 36 0 0 chr13 61860086 61860224 -58424088 - B1_Mm SINE Alu -9 138 1 4 1056 702 91 0 0 chr13 61860467 61860566 -58423746 - B1_Mus2 SINE Alu -2 145 47 4 1056 363 274 34 42 chr13 61860471 61860589 -58423723 - ID_B1 SINE B4 -6 218 102 4 1056 2360 166 70 9 chr13 61860589 61861117 -58423195 + L1_Mur1 LINE L1 4248 4807 -1079 4 1056 1139 95 0 0 chr13 61861357 61861504 -58422808 + B1_Mus2 SINE Alu 1 147 0 4 1056 526 42 56 0 chr13 61861553 61861625 -58422687 - MTB LTR MaLR 0 400 325 4 1056 394 98 75 11 chr13 61861625 61861718 -58422594 + GA-rich Low_complexity Low_complexity 2 100 0 4 1056 243 157 0 0 chr13 61862197 61862248 -58422064 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1056 852 158 7 7 chr13 61862555 61862708 -58421604 - B2_Mm1t SINE B2 -4 189 37 4 1056 284 270 0 63 chr13 61862764 61862843 -58421469 + RSINE1 SINE B4 8 81 -84 4 1056 440 81 0 13 chr13 61863338 61863413 -58420899 + (TTTTG)n Simple_repeat Simple_repeat 2 75 0 4 1056 204 40 0 0 chr13 61863608 61863633 -58420679 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1056 3052 220 83 6 chr13 61864918 61865637 -58418675 + RLTR25B LTR ERVK 1 775 -253 4 1056 517 177 26 0 chr13 61865837 61865950 -58418362 + MusHAL1 LINE L1 1409 1524 -1188 4 16 1115 193 29 43 chr13 61865935 61865989 -58418323 + L1_Mur2 LINE L1 5308 5360 -517 4 1057 1624 31 0 20 chr13 61865989 61866186 -58418126 + B2_Mm1a SINE B2 1 193 0 4 1057 1115 193 29 43 chr13 61866186 61866407 -58417905 + L1_Mur2 LINE L1 5361 5579 -298 4 1057 5117 166 19 31 chr13 61867277 61868333 -58415979 - Lx2A1 LINE L1 -32 6976 5934 4 1057 2849 158 19 0 chr13 61868332 61868959 -58415353 + Lx2A1 LINE L1 5287 5921 -1087 4 1057 186 43 0 0 chr13 61869050 61869073 -58415239 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1057 1001 86 14 14 chr13 61869081 61869223 -58415089 - B1_Mm SINE Alu -5 142 1 4 1057 378 160 8 23 chr13 61869246 61869374 -58414938 + T-rich Low_complexity Low_complexity 2 127 0 4 1057 551 230 6 69 chr13 61869530 61869689 -58414623 - RMER12 LTR ERVK 0 1322 1174 4 1057 411 276 184 66 chr13 61869903 61869936 -58414376 - RMER12 LTR ERVK -92 1230 1195 4 1057 1237 65 71 0 chr13 61869936 61870106 -58414206 + B2_Mm2 SINE B2 2 183 -12 4 1057 411 276 184 66 chr13 61870106 61870316 -58413996 - RMER12 LTR ERVK -128 1194 958 4 1057 565 199 35 53 chr13 61870357 61870478 -58413834 - RMER12 LTR ERVK -559 763 642 4 1057 1128 95 0 0 chr13 61870478 61870625 -58413687 + B1_Mus2 SINE Alu 1 147 0 4 1057 565 199 35 53 chr13 61870625 61870673 -58413639 - RMER12 LTR ERVK -681 641 597 4 1057 1594 184 153 13 chr13 61870662 61871047 -58413265 - RMER12 LTR ERVK -883 439 1 4 1057 256 321 0 0 chr13 61871053 61871137 -58413175 - Lx5 LINE L1 -262 6788 6705 4 1057 1528 38 16 0 chr13 61871200 61871383 -58412929 - B2_Mm1a SINE B2 -6 187 2 4 1057 648 258 90 59 chr13 61871387 61871746 -58412566 + MT2A LTR ERVL 92 601 0 4 1057 266 268 91 23 chr13 61872273 61872361 -58411951 + RLTR23 LTR ERV1 337 430 0 4 1057 384 207 7 20 chr13 61872552 61872705 -58411607 + GA-rich Low_complexity Low_complexity 3 153 0 4 1057 1069 71 7 0 chr13 61873472 61873612 -58410700 - B1_Mus2 SINE Alu -6 141 1 4 1057 1066 102 0 0 chr13 61874196 61874343 -58409969 + B1_Mm SINE Alu 1 147 0 4 1057 215 69 86 0 chr13 61874343 61874401 -58409911 + A-rich Low_complexity Low_complexity 3 65 0 4 1057 1176 62 0 0 chr13 61874955 61875101 -58409211 + B1_Mus2 SINE Alu 2 147 0 4 1057 243 150 0 0 chr13 61875101 61875161 -58409151 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 4 1057 180 0 0 0 chr13 61876110 61876130 -58408182 + (TA)n Simple_repeat Simple_repeat 2 21 0 4 1057 28 61 0 0 chr13 61876575 61876624 -58407688 + AT_rich Low_complexity Low_complexity 1 49 0 4 1057 973 143 17 6 chr13 61876737 61876913 -58407399 - B2_Mm1t SINE B2 -14 179 2 4 1057 22 0 0 0 chr13 61878057 61878079 -58406233 + AT_rich Low_complexity Low_complexity 1 22 0 4 1057 369 255 146 27 chr13 61878219 61878397 -58405915 + B3A SINE B2 2 206 -10 4 1057 1211 54 0 0 chr13 61878408 61878555 -58405757 + B1_Mm SINE Alu 1 147 0 4 1057 730 330 78 46 chr13 61879368 61879739 -58404573 + MTD LTR MaLR 18 400 -19 4 1057 22 0 0 0 chr13 61880020 61880042 -58404270 + AT_rich Low_complexity Low_complexity 1 22 0 4 1057 335 352 8 23 chr13 61880251 61880379 -58403933 - B3 SINE B2 -7 209 84 4 1057 1111 43 0 0 chr13 61880493 61880631 -58403681 - B1_Mm SINE Alu -1 146 9 4 1057 1736 240 54 88 chr13 61880640 61880716 -58403596 - RLTR20D LTR ERVK -17 551 475 4 1057 201 39 0 0 chr13 61880716 61880742 -58403570 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1057 1736 240 54 88 chr13 61880742 61881235 -58403077 - RLTR20D LTR ERVK -94 474 2 4 1057 4268 195 34 12 chr13 61881359 61882352 -58401960 + MurSatRep1 Unknown Unknown 1 1015 -1122 4 1057 12706 121 9 19 chr13 61882378 61885452 -58398860 - L1_Mus3 LINE L1 -2 6636 3603 4 1057 4185 214 18 48 chr13 61885454 61885676 -58398636 + MurSatRep1 Unknown Unknown 1003 1198 -939 4 1057 5649 48 10 0 chr13 61885676 61886363 -58397949 + L1Md_T LINE L1 5888 6581 -1 4 1057 4185 214 18 48 chr13 61886363 61887299 -58397013 + MurSatRep1 Unknown Unknown 1199 2126 -11 4 1057 300 304 14 0 chr13 61887496 61887634 -58396678 + MMSAT4 Satellite Satellite 29 168 0 4 1057 253 355 19 10 chr13 61887518 61887723 -58396589 + MurSatRep1 Unknown Unknown 1843 2049 -88 4 1057 416 261 14 14 chr13 61887676 61887958 -58396354 + MMSAT4 Satellite Satellite 1 282 0 4 1057 787 242 77 0 chr13 61888701 61888895 -58395417 - RLTR11A LTR ERVK -3 525 317 4 1057 1659 168 91 0 chr13 61889722 61890019 -58394293 + ORR1A2 LTR MaLR 1 324 -3 4 1057 900 136 167 0 chr13 61890149 61890311 -58394001 - B2_Mm1t SINE B2 -3 190 2 4 1057 2307 246 100 28 chr13 61890408 61891087 -58393225 - Lx5 LINE L1 -1 7049 6322 4 1057 369 0 0 0 chr13 61891089 61891130 -58393182 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1057 306 107 0 0 chr13 61891130 61891186 -58393126 + (GA)n Simple_repeat Simple_repeat 2 57 0 4 1057 438 181 55 33 chr13 61891186 61891369 -58392943 - RMER17C LTR ERVK -136 274 88 4 1057 3284 226 55 20 chr13 61891381 61892174 -58392138 - Lx5 LINE L1 -714 6344 5485 4 1057 305 24 24 0 chr13 61892174 61892216 -58392096 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1057 1057 97 0 0 chr13 61892216 61892350 -58391962 - B1_Mus2 SINE Alu -11 136 3 4 1057 3284 202 44 25 chr13 61892350 61892706 -58391606 - Lx5 LINE L1 -393 5484 5118 4 1057 1617 62 0 5 chr13 61892716 61892910 -58391402 - B2_Mm2 SINE B2 -1 194 2 4 1057 296 299 0 25 chr13 61894004 61894083 -58390229 + RSINE1 SINE B4 5 81 -84 4 1057 488 31 31 0 chr13 61894101 61894166 -58390146 + (TTTC)n Simple_repeat Simple_repeat 3 69 0 4 1057 1200 63 14 0 chr13 61894172 61894315 -58389997 - B1_Mm SINE Alu -2 145 1 4 1057 351 344 40 8 chr13 61894396 61894522 -58389790 + RSINE1 SINE B4 36 165 0 4 1057 410 311 53 0 chr13 61894741 61894873 -58389439 + B1_Mur2 SINE Alu 10 148 -1 4 1057 1206 68 0 0 chr13 61895850 61895996 -58388316 - B1_Mm SINE Alu -1 146 1 4 1057 11763 27 1 1 chr13 61896002 61898038 -58386274 - L1Md_T LINE L1 -2 6580 4547 4 1057 344 272 84 46 chr13 61898038 61898169 -58386143 - B1_Mur1 SINE Alu -2 147 12 4 1057 217 211 70 0 chr13 61898383 61898440 -58385872 - MIRc SINE MIR -102 166 106 4 1057 280 276 0 0 chr13 61898523 61898581 -58385731 + B4A SINE B4 86 143 -149 4 1057 755 321 47 4 chr13 61899535 61899813 -58384499 + MTE-int LTR MaLR 1055 1344 -236 4 1057 414 289 31 63 chr13 61899963 61900122 -58384190 - RLTR18 LTR ERVK -391 225 72 4 1057 347 281 54 14 chr13 61900199 61900347 -58383965 + Lx9 LINE L1 7346 7499 -145 4 1057 398 304 102 17 chr13 61902009 61902186 -58382126 + B3 SINE B2 24 215 -1 4 1057 1415 82 49 0 chr13 61902828 61903012 -58381300 - B2_Mm1t SINE B2 0 193 1 4 1057 1619 42 0 31 chr13 61903628 61903824 -58380488 + B2_Mm1t SINE B2 1 190 -3 4 1057 312 306 81 0 chr13 61903936 61904047 -58380265 - ID_B1 SINE B4 -10 214 95 4 1057 1103 109 84 12 chr13 61904202 61904369 -58379943 + B2_Mm1a SINE B2 1 179 -14 4 1057 264 140 345 62 chr13 61904414 61904527 -58379785 + B2_Mm2 SINE B2 48 192 -3 4 1057 288 259 47 12 chr13 61904608 61904694 -58379618 + MT2B LTR ERVL 41 129 -404 4 1057 395 292 88 116 chr13 61904719 61905048 -58379264 + MT2B LTR ERVL 282 601 0 4 1057 849 222 73 25 chr13 61905835 61906080 -58378232 - RLTR22_Mur LTR ERVK 0 1848 1592 4 1057 1094 179 5 5 chr13 61906239 61906435 -58377877 - RLTR22_Mur LTR ERVK -240 1608 1413 4 1057 1003 143 0 0 chr13 61906640 61906787 -58377525 - B1_Mus1 SINE Alu 0 148 2 4 1057 583 118 0 19 chr13 61907373 61907477 -58376835 - Lx4A LINE L1 -4 7054 6953 4 1057 1398 111 11 0 chr13 61907665 61907855 -58376457 - B2_Mm1t SINE B2 0 193 2 4 1057 1383 50 0 0 chr13 61908273 61908453 -58375859 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 4 1057 265 284 68 0 chr13 61909743 61909817 -58374495 - ID_B1 SINE B4 -9 215 137 4 1057 509 267 80 115 chr13 61910143 61910527 -58373785 + MT2B LTR ERVL 70 601 0 4 1057 310 230 11 39 chr13 61911342 61911523 -58372789 + GA-rich Low_complexity Low_complexity 3 178 0 4 1057 1098 98 7 14 chr13 61913188 61913333 -58370979 - B1_Mus2 SINE Alu -2 145 2 4 1057 987 122 0 7 chr13 61913564 61913704 -58370608 + B1_Mus2 SINE Alu 1 139 -8 4 1057 183 42 0 0 chr13 61913704 61913728 -58370584 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1057 308 247 47 12 chr13 61913812 61913898 -58370414 + MT2B LTR ERVL 41 129 -404 5 1057 402 309 57 91 chr13 61913923 61914254 -58370058 + MT2B LTR ERVL 282 601 0 5 1057 191 88 0 29 chr13 61914540 61914575 -58369737 + (GGA)n Simple_repeat Simple_repeat 1 34 0 5 1057 747 260 22 27 chr13 61915065 61915290 -58369022 - RLTR22_Mur LTR ERVK -33 1815 1592 5 1057 1212 147 5 0 chr13 61915448 61915646 -58368666 - RLTR22_Mus LTR ERVK -248 1560 1362 5 1057 195 42 0 0 chr13 61916187 61916211 -58368101 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1057 514 164 0 19 chr13 61916354 61916460 -58367852 - Lx4A LINE L1 -2 7056 6953 5 1057 262 224 49 62 chr13 61916992 61917073 -58367239 + ORR1D1 LTR MaLR 275 354 -20 5 1057 271 280 50 62 chr13 61918553 61918713 -58365599 + RMER2 LTR ERV1 383 540 -27 5 1057 1065 112 21 0 chr13 61919144 61919287 -58365025 + B1_Mus1 SINE Alu 3 148 0 5 1057 275 131 0 47 chr13 61919287 61919351 -58364961 + A-rich Low_complexity Low_complexity 1 61 0 5 1057 2281 111 19 3 chr13 61919432 61919749 -58364563 + L1_Mus3 LINE L1 6313 6634 -4 5 1057 319 179 0 0 chr13 61920139 61920195 -58364117 - MTB LTR MaLR 0 400 345 5 1057 249 127 18 35 chr13 61921422 61921479 -58362833 - Lx4B LINE L1 -191 6867 6812 5 1057 499 162 17 95 chr13 61921479 61921595 -58362717 - RMER12 LTR ERVK 0 1322 1216 5 1057 631 312 56 106 chr13 61922098 61922138 -58362174 - ORR1D2 LTR MaLR -1 369 330 5 1057 1849 258 25 30 chr13 61922138 61922669 -58361643 - RLTR11A LTR ERVK 0 528 1 5 1057 631 312 56 106 chr13 61922669 61922824 -58361488 - ORR1D2 LTR MaLR -41 329 183 5 1057 1166 95 0 0 chr13 61922824 61922971 -58361341 + B1_Mus2 SINE Alu 1 147 0 5 1057 631 312 56 106 chr13 61922971 61923114 -58361198 - ORR1D2 LTR MaLR -188 182 47 5 1057 248 111 0 18 chr13 61924053 61924108 -58360204 + (TTTTTG)n Simple_repeat Simple_repeat 1 54 0 5 1057 1139 95 0 13 chr13 61924108 61924257 -58360055 - B1_Mm SINE Alu 0 147 1 5 1057 525 32 0 0 chr13 61924689 61924752 -58359560 + (TA)n Simple_repeat Simple_repeat 2 64 0 5 1057 3771 23 136 0 chr13 61924790 61925224 -58359088 - MT2_Mm LTR ERVL 0 493 1 5 1057 240 229 49 0 chr13 61925224 61925285 -58359027 - MIRb SINE MIR -101 167 104 5 1057 237 351 81 0 chr13 61925364 61925438 -58358874 + ID_B1 SINE B4 81 160 -64 5 1057 1152 84 7 0 chr13 61926857 61926999 -58357313 - B1_Mus1 SINE Alu -1 147 5 5 1057 1246 129 27 0 chr13 61927688 61927874 -58356438 + B2_Mm1t SINE B2 2 192 -1 5 1057 234 0 0 0 chr13 61928836 61928862 -58355450 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1057 21 0 0 0 chr13 61928991 61929012 -58355300 + AT_rich Low_complexity Low_complexity 1 21 0 5 1057 38814 40 1 2 chr13 61929016 61935432 -58348880 - L1Md_T LINE L1 -12 6573 66 5 1057 343 245 191 0 chr13 61935564 61935658 -58348654 - B3 SINE B2 -103 113 2 5 1057 718 338 36 7 chr13 61935710 61935987 -58348325 + MTE-int LTR MaLR 1056 1340 -240 5 1057 231 195 0 0 chr13 61936163 61936204 -58348108 - RLTR18 LTR ERVK -416 200 160 5 1057 331 288 53 27 chr13 61936396 61936546 -58347766 + Lx9 LINE L1 7346 7499 -145 5 1057 7750 15 1 4 chr13 61937300 61938124 -58346188 - RLTR13B2 LTR ERVK 0 822 1 5 1057 22 56 0 0 chr13 61938246 61938282 -58346030 + AT_rich Low_complexity Low_complexity 1 36 0 5 1057 501 259 106 28 chr13 61938290 61938469 -58345843 + B3 SINE B2 24 216 0 5 1057 207 88 0 0 chr13 61939670 61939704 -58344608 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 5 1057 1070 111 0 7 chr13 61939704 61939844 -58344468 - B1_Mus1 SINE Alu -3 145 6 5 1057 292 232 130 0 chr13 61939979 61940048 -58344264 - ID_B1 SINE B4 -10 214 137 5 1057 299 247 47 12 chr13 61940311 61940397 -58343915 + MT2B2 LTR ERVL 41 129 -404 5 1057 516 241 64 143 chr13 61940422 61940751 -58343561 + MT2B2 LTR ERVL 282 584 0 5 1057 768 253 65 24 chr13 61941530 61941777 -58342535 - RLTR22_Mur LTR ERVK 0 1848 1592 5 1057 1153 151 21 0 chr13 61941936 61942128 -58342184 - RLTR22_Mur LTR ERVK -240 1608 1413 5 1057 480 196 0 19 chr13 61942839 61942943 -58341369 - Lx4A LINE L1 -4 7054 6953 5 1057 250 237 49 62 chr13 61943308 61943389 -58340923 + ORR1D1 LTR MaLR 275 354 -20 5 1057 1499 71 43 0 chr13 61943931 61944115 -58340197 + B2_Mm2 SINE B2 2 193 -2 5 1057 1750 21 0 10 chr13 61944116 61944308 -58340004 + B2_Mm1a SINE B2 2 191 -2 5 1057 231 36 0 0 chr13 61944322 61944350 -58339962 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1057 186 43 0 0 chr13 61944356 61944379 -58339933 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1057 222 37 0 0 chr13 61944383 61944410 -58339902 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1057 292 301 40 57 chr13 61945343 61945519 -58338793 + RMER2 LTR ERV1 368 540 -27 5 1057 2222 120 19 0 chr13 61946022 61946338 -58337974 + L1_Mus3 LINE L1 6313 6634 -4 5 1057 1318 34 0 0 chr13 61946359 61946505 -58337807 - B1_Mm SINE Alu 0 147 2 5 1057 319 179 0 0 chr13 61946900 61946956 -58337356 - MTB LTR MaLR 0 400 345 5 1057 860 78 0 0 chr13 61947471 61947586 -58336726 + B1_Mus2 SINE Alu 33 147 0 5 1057 186 43 0 0 chr13 61947587 61947610 -58336702 + (GAA)n Simple_repeat Simple_repeat 2 24 0 5 1057 242 146 18 35 chr13 61948428 61948485 -58335827 - Lx4B LINE L1 -191 6867 6812 5 1057 743 211 16 64 chr13 61948485 61948672 -58335640 - RMER12 LTR ERVK 0 1322 1145 5 1057 355 292 161 49 chr13 61948962 61949185 -58335127 - RMER12 LTR ERVK -134 1188 941 5 1057 231 114 0 0 chr13 61949186 61949221 -58335091 + (TGGA)n Simple_repeat Simple_repeat 1 35 0 5 1057 393 324 93 74 chr13 61949409 61949449 -58334863 + MT2B LTR ERVL 40 77 -456 5 1057 180 0 0 0 chr13 61949449 61949469 -58334843 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 1057 1149 83 0 0 chr13 61949469 61949614 -58334698 - B1_Mus2 SINE Alu -2 145 1 5 1057 443 266 99 128 chr13 61949614 61949994 -58334318 + MT2B LTR ERVL 78 599 -2 5 1057 313 268 153 10 chr13 61950296 61950394 -58333918 + B3A SINE B2 53 164 -34 5 1057 258 359 136 14 chr13 61951142 61951362 -58332950 + MTD LTR MaLR 18 264 -155 5 1057 2450 150 0 31 chr13 61951418 61951831 -58332481 - Lx LINE L1 -1 6653 6254 5 1057 3662 30 136 2 chr13 61951833 61952268 -58332044 + MT2_Mm LTR ERVL 1 493 0 5 1057 2872 25 0 0 chr13 61952268 61952593 -58331719 + MERVL-int LTR ERVL 1 325 -5160 5 1057 28391 21 13 0 chr13 61952586 61955763 -58328549 + MERVL-int LTR ERVL 945 4163 -1322 5 1057 5776 162 18 34 chr13 61955763 61957315 -58326997 - Lx2 LINE L1 -376 6621 5090 5 1057 3360 53 8 0 chr13 61957315 61957708 -58326604 + MTA_Mm LTR MaLR 1 396 0 5 1057 5116 176 24 8 chr13 61957708 61957879 -58326433 - Lx2 LINE L1 -794 5089 4921 5 1057 1047 213 9 0 chr13 61957864 61958075 -58326237 + L1VL2 LINE L1 53 265 -6070 5 1057 8091 220 30 48 chr13 61958136 61958229 -58326083 + MurSatRep1 Unknown Unknown 1 73 -2064 5 1057 1398 68 17 11 chr13 61958229 61958408 -58325904 + B2_Mm2 SINE B2 2 181 -14 5 1057 8091 220 30 48 chr13 61958408 61958590 -58325722 + MurSatRep1 Unknown Unknown 74 250 -1887 5 1057 198 0 0 0 chr13 61958590 61958612 -58325700 + (GTTTG)n Simple_repeat Simple_repeat 2 23 0 5 1057 1095 109 0 0 chr13 61958612 61958750 -58325562 - B1_Mus2 SINE Alu -9 138 1 5 1057 8091 220 30 48 chr13 61958750 61958954 -58325358 + MurSatRep1 Unknown Unknown 251 424 -1713 5 1057 1044 151 48 5 chr13 61958954 61959140 -58325172 + B2_Mm2 SINE B2 2 195 0 5 1057 8091 220 30 48 chr13 61959140 61960809 -58323503 + MurSatRep1 Unknown Unknown 425 2111 -26 5 1057 1016 172 5 25 chr13 61960810 61961007 -58323305 + B2_Mm1a SINE B2 1 193 0 5 1057 634 267 2 1 chr13 61961226 61961268 -58323044 + MMSAT4 Satellite Satellite 1 47 -1694 5 1057 441 333 15 10 chr13 61961268 61961465 -58322847 + MurSatRep1 Unknown Unknown 1852 2049 -88 5 1057 634 267 2 1 chr13 61961465 61962966 -58321346 + MMSAT4 Satellite Satellite 48 1741 0 5 1057 183 114 0 0 chr13 61963248 61963283 -58321029 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1057 333 225 44 11 chr13 61964020 61964110 -58320202 - RLTR11A LTR ERVK 0 528 436 5 1057 999 45 172 0 chr13 61964151 61964285 -58320027 - L1Md_A LINE L1 -1 6581 6425 5 1057 1338 259 90 35 chr13 61964285 61964717 -58319595 - RLTR11A LTR ERVK -72 456 1 5 1057 605 337 64 57 chr13 61964717 61964872 -58319440 - ORR1D2 LTR MaLR -41 329 168 5 1057 1083 112 0 0 chr13 61964872 61965015 -58319297 + B1_Mus2 SINE Alu 1 143 -4 5 1057 726 12 0 0 chr13 61965015 61965098 -58319214 + (GA)n Simple_repeat Simple_repeat 2 84 0 5 1057 605 337 64 57 chr13 61965098 61965222 -58319090 - ORR1D2 LTR MaLR -203 167 48 5 1057 243 60 60 0 chr13 61966167 61966217 -58318095 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 5 1057 4839 137 10 71 chr13 61966218 61967148 -58317164 - RLTR13A3 LTR ERVK 0 978 106 5 1057 1005 121 0 0 chr13 61967154 61967294 -58317018 - B1_Mm SINE Alu -7 140 1 5 1057 234 351 81 0 chr13 61967899 61967973 -58316339 + ID_B1 SINE B4 81 160 -64 5 1057 5396 52 3 3 chr13 61968925 61969560 -58314752 - L1Md_F2 LINE L1 -8 6574 5940 5 1057 384 59 0 0 chr13 61969685 61969736 -58314576 + (TTTG)n Simple_repeat Simple_repeat 3 53 0 5 1057 1051 62 31 0 chr13 61969736 61969865 -58314447 - B1_Mus1 SINE Alu -11 137 5 5 1057 1310 100 28 0 chr13 61970557 61970737 -58313575 + B2_Mm1t SINE B2 2 186 -7 5 1057 186 71 0 0 chr13 61971711 61971739 -58312573 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1057 393 279 87 0 chr13 61971995 61972099 -58312213 - B3 SINE B2 -103 113 1 5 1057 348 64 0 0 chr13 61972115 61972162 -58312150 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 5 1057 1283 35 7 0 chr13 61972174 61972318 -58311994 - B1_Mm SINE Alu 0 147 3 5 1057 315 0 0 0 chr13 61972320 61972355 -58311957 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 5 1057 222 37 0 0 chr13 61972357 61972384 -58311928 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 1057 1189 81 0 13 chr13 61972393 61972543 -58311769 - B1_Mus1 SINE Alu 0 148 1 5 1057 579 344 54 4 chr13 61972604 61972864 -58311448 + MTE-int LTR MaLR 1068 1340 -240 5 1057 398 228 17 176 chr13 61973027 61973203 -58311109 - RLTR18 LTR ERVK -404 212 65 5 1057 32 43 0 0 chr13 61974210 61974256 -58310056 + AT_rich Low_complexity Low_complexity 1 46 0 5 1057 283 255 167 0 chr13 61974326 61974428 -58309884 + B3 SINE B2 98 216 0 5 1057 411 286 100 58 chr13 61974598 61974876 -58309436 + MT2A LTR ERVL 86 517 -84 6 1057 370 121 0 0 chr13 61974889 61974955 -58309357 - B2_Mm1t SINE B2 -4 189 124 6 1057 180 0 0 0 chr13 61975004 61975024 -58309288 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 6 1057 1084 108 0 6 chr13 61975025 61975183 -58309129 - B2_Mm2 SINE B2 -37 158 2 6 1057 317 308 25 25 chr13 61975829 61975949 -58308363 + RLTR23 LTR ERV1 311 430 0 6 1057 31 26 0 0 chr13 61976017 61976055 -58308257 + AT_rich Low_complexity Low_complexity 1 38 0 6 1057 1174 76 14 0 chr13 61976055 61976200 -58308112 - B1_Mus2 SINE Alu 0 147 1 6 1057 3454 74 49 15 chr13 61976351 61976817 -58307495 + RLTR45 LTR ERVK 1 482 0 6 1057 251 237 7 7 chr13 61976838 61976998 -58307314 + GA-rich Low_complexity Low_complexity 1 160 0 6 1057 7851 97 16 45 chr13 61977175 61978325 -58305987 - Lx3_Mus LINE L1 0 7009 5893 6 1057 240 111 0 0 chr13 61978339 61978375 -58305937 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 6 1057 413 53 0 17 chr13 61978376 61978434 -58305878 - B2_Mm1a SINE B2 -19 174 118 6 1057 202 143 24 0 chr13 61978487 61978529 -58305783 + T-rich Low_complexity Low_complexity 5 47 0 6 1057 696 101 0 0 chr13 61978535 61978634 -58305678 - B1_Mus2 SINE Alu -2 145 47 6 1057 350 283 34 42 chr13 61978539 61978657 -58305655 - ID_B1 SINE B4 -6 218 102 6 1057 2652 174 56 9 chr13 61978657 61979192 -58305120 + L1_Mur1 LINE L1 4248 4807 -1079 6 1057 1196 95 0 0 chr13 61979432 61979579 -58304733 + B1_Mm SINE Alu 1 147 0 6 1057 346 37 146 12 chr13 61979602 61979684 -58304628 + GA-rich Low_complexity Low_complexity 2 94 0 6 1057 3001 55 3 5 chr13 61979684 61980067 -58304245 - MTA_Mm LTR MaLR -14 382 1 6 1057 328 396 71 64 chr13 61980077 61980437 -58303875 + ORR1D2-int LTR MaLR 181 543 -827 6 1057 617 115 283 0 chr13 61980437 61980550 -58303762 + B1_Mus1 SINE Alu 3 147 -1 6 1057 328 396 71 64 chr13 61980550 61980569 -58303743 + ORR1D2-int LTR MaLR 544 561 -809 6 1057 1045 100 6 6 chr13 61980569 61980740 -58303572 + (GAAA)n Simple_repeat Simple_repeat 3 173 0 6 1057 328 399 65 57 chr13 61980740 61980977 -58303335 + ORR1D2-int LTR MaLR 562 925 -655 6 1057 396 59 0 0 chr13 61980997 61981048 -58303264 + (TC)n Simple_repeat Simple_repeat 2 52 0 6 1057 982 86 42 21 chr13 61981060 61981203 -58303109 - B1_Mm SINE Alu 0 147 2 6 1057 922 320 99 28 chr13 61981226 61981421 -58302891 + ORR1D2-int LTR MaLR 835 1046 -324 6 1057 1229 82 0 0 chr13 61981421 61981567 -58302745 + B1_Mus2 SINE Alu 2 147 0 6 1057 922 320 99 28 chr13 61981567 61981844 -58302468 + ORR1D2-int LTR MaLR 1047 1341 -29 6 1057 278 335 88 66 chr13 61981898 61982125 -58302187 + ORR1D2 LTR MaLR 43 274 -96 6 1057 281 286 93 43 chr13 61982213 61982352 -58301960 - B1_Mus2 SINE Alu 0 147 2 6 1057 288 397 32 19 chr13 61982610 61982764 -58301548 - B3A SINE B2 -16 182 27 6 1057 982 274 28 49 chr13 61982766 61983050 -58301262 - RLTR20D LTR ERVK 0 568 291 6 1057 561 228 0 17 chr13 61983049 61983061 -58301251 - RLTR20D LTR ERVK -454 114 104 6 1057 216 0 0 0 chr13 61983070 61983094 -58301218 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1057 1093 116 0 0 chr13 61983094 61983231 -58301081 - B1_Mus1 SINE Alu -9 139 3 6 1057 561 228 0 17 chr13 61983231 61983334 -58300978 - RLTR20D LTR ERVK -465 103 1 6 1057 15956 98 6 11 chr13 61983440 61985004 -58299308 + L1_Mus1 LINE L1 3604 5172 -711 6 1057 1146 110 0 0 chr13 61985004 61985150 -58299162 + B1_Mus2 SINE Alu 2 147 0 6 1057 15956 72 2 3 chr13 61985150 61986559 -58297753 + L1_Mus1 LINE L1 5173 6565 -2 6 1057 591 209 14 29 chr13 61986580 61986718 -58297594 + MurSatRep1 Unknown Unknown 14 149 -1988 6 1057 450 290 15 0 chr13 61986720 61986851 -58297461 - B1_Mur2 SINE Alu -16 133 1 6 1057 1033 188 9 23 chr13 61986862 61986930 -58297382 + MurSatRep1 Unknown Unknown 293 356 -1781 6 1057 1226 68 0 0 chr13 61986930 61987077 -58297235 - B1_Mm SINE Alu 0 147 1 6 1057 1033 188 9 23 chr13 61987077 61987226 -58297086 + MurSatRep1 Unknown Unknown 357 507 -1630 6 1057 449 162 0 0 chr13 61987250 61987324 -58296988 + MurSatRep1 Unknown Unknown 627 700 -1437 6 1057 1740 79 0 0 chr13 61987324 61987538 -58296774 + L1_Mus2 LINE L1 6353 6566 0 6 1057 1180 83 21 0 chr13 61987551 61987696 -58296616 + B1_Mus1 SINE Alu 1 148 0 6 1057 267 31 0 0 chr13 61987703 61987735 -58296577 + (GA)n Simple_repeat Simple_repeat 2 33 0 6 1057 510 61 0 0 chr13 61987735 61987801 -58296511 + (GGAA)n Simple_repeat Simple_repeat 4 69 0 6 1057 1196 224 24 10 chr13 61987803 61988077 -58296235 - L1_Mur2 LINE L1 -4008 1869 1591 6 1057 207 0 0 0 chr13 61988077 61988100 -58296212 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 6 1057 1196 224 24 10 chr13 61988100 61988113 -58296199 - L1_Mur2 LINE L1 -4287 1590 1578 6 1057 225 65 0 0 chr13 61988113 61988144 -58296168 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 6 1057 733 95 20 66 chr13 61988151 61988319 -58295993 - B1_Mus1 SINE Alu 0 150 10 6 1057 1198 68 0 39 chr13 61988337 61988490 -58295822 - B1_Mus2 SINE Alu 0 147 1 6 1057 349 145 43 0 chr13 61988496 61988565 -58295747 - L1_Mur2 LINE L1 -4286 1594 1523 6 1057 636 50 0 0 chr13 61988583 61988663 -58295649 + (TC)n Simple_repeat Simple_repeat 1 80 0 6 1057 282 263 3 15 chr13 61988674 61988749 -58295563 - ORR1D2 LTR MaLR -244 130 55 6 1057 261 0 0 0 chr13 61989615 61989644 -58294668 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1057 327 169 0 0 chr13 61990143 61990214 -58294098 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 1057 869 157 7 7 chr13 61990524 61990678 -58293634 - B2_Mm1t SINE B2 -3 190 37 6 1057 277 270 0 63 chr13 61990734 61990813 -58293499 + RSINE1 SINE B4 8 81 -84 6 1057 351 0 0 0 chr13 61991325 61991364 -58292948 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1057 250 202 88 78 chr13 61992750 61992852 -58291460 + Lx9 LINE L1 7336 7438 -206 6 1057 3138 210 84 11 chr13 61992863 61993585 -58290727 + RLTR25B LTR ERVK 1 775 -253 6 1057 572 191 26 0 chr13 61993784 61993899 -58290413 + MusHAL1 LINE L1 1407 1524 -1188 6 1057 1324 196 26 4 chr13 61993884 61994156 -58290156 + L1_Mur2 LINE L1 5308 5585 -292 6 1057 202 51 50 25 chr13 61994213 61994253 -58290059 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 6 1057 1235 69 0 0 chr13 61994256 61994400 -58289912 - B1_Mus2 SINE Alu 0 147 4 6 1057 26 0 0 0 chr13 61994852 61994878 -58289434 + GC_rich Low_complexity Low_complexity 1 26 0 6 1057 3163 60 8 0 chr13 61995018 61995400 -58288912 + L1Md_F2 LINE L1 6197 6581 -1 6 1057 979 84 99 0 chr13 61995541 61995672 -58288640 + B1_Mus1 SINE Alu 5 148 0 6 1057 249 109 0 0 chr13 61995673 61995719 -58288593 + (A)n Simple_repeat Simple_repeat 1 46 0 6 1057 5848 178 19 29 chr13 61995787 61996870 -58287442 - Lx2A1 LINE L1 -3 7005 5934 6 132 3065 146 56 0 chr13 61996870 61997485 -58286827 + Lx LINE L1 5288 5925 -729 6 1058 366 236 110 91 chr13 61997768 61997922 -58286390 - RMER12 LTR ERVK 0 1322 1166 6 1058 180 150 0 0 chr13 61998157 61998187 -58286125 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1058 1335 20 7 0 chr13 61998187 61998333 -58285979 - B1_Mus2 SINE Alu 0 147 1 6 1058 180 150 0 0 chr13 61998333 61998342 -58285970 + (T)n Simple_repeat Simple_repeat 1 9 0 6 1058 1452 90 11 0 chr13 61998342 61998531 -58285781 - B2_Mm1t SINE B2 0 193 3 6 1058 400 227 203 14 chr13 61998573 61998716 -58285596 - RMER12 LTR ERVK -178 1144 975 6 1058 4433 148 41 53 chr13 61998729 61999378 -58284934 + RMER17A2 LTR ERVK 1 653 -253 6 1058 738 0 0 0 chr13 61999378 61999460 -58284852 + (TC)n Simple_repeat Simple_repeat 2 83 0 6 1058 4433 148 41 53 chr13 61999460 61999727 -58284585 + RMER17A2 LTR ERVK 654 906 0 6 1058 457 179 31 21 chr13 61999782 61999877 -58284435 - RMER12 LTR ERVK -557 765 670 6 1058 917 89 0 0 chr13 61999877 62000000 -58284312 + B2_Mm2 SINE B2 2 124 -71 6 1058 240 183 0 32 chr13 62000000 62000062 -58284250 + B2_Mm2 SINE B2 125 184 -11 1 1058 53 17 0 0 chr13 62000062 62000122 -58284190 + AT_rich Low_complexity Low_complexity 1 60 0 2 1058 394 77 38 13 chr13 62000122 62000201 -58284111 + (TATAA)n Simple_repeat Simple_repeat 2 82 0 3 1058 44 20 0 0 chr13 62000201 62000252 -58284060 + AT_rich Low_complexity Low_complexity 1 51 0 4 1058 1518 195 122 7 chr13 62000252 62000865 -58283447 - RMER12 LTR ERVK -638 684 1 5 1058 678 257 37 32 chr13 62000871 62001060 -58283252 - Lx5 LINE L1 -262 6788 6621 6 1058 1795 221 94 104 chr13 62001137 62001752 -58282560 - RLTR18 LTR ERVK -5 611 3 7 1058 240 236 33 22 chr13 62001823 62001914 -58282398 + Lx9 LINE L1 7385 7476 -168 8 1058 1075 95 0 0 chr13 62002009 62002156 -58282156 + B1_Mus1 SINE Alu 2 148 0 9 1058 185 0 40 0 chr13 62002277 62002302 -58282010 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1 1058 1085 96 7 0 chr13 62002304 62002450 -58281862 - B1_Mm SINE Alu 0 147 1 1 1058 1128 141 11 0 chr13 62002519 62002696 -58281616 + B2_Mm1t SINE B2 1 179 -14 1 1058 306 130 327 27 chr13 62002772 62002882 -58281430 + B2_Mm2 SINE B2 47 189 -6 1 1058 47 73 0 0 chr13 62002921 62003017 -58281295 + AT_rich Low_complexity Low_complexity 1 96 0 1 1058 637 261 105 11 chr13 62003018 62003208 -58281104 + B3 SINE B2 9 216 0 1 1058 376 224 10 39 chr13 62004103 62004205 -58280107 + MT2A LTR ERVL 82 180 -353 1 1058 1266 96 17 0 chr13 62004210 62004387 -58279925 + B2_Mm1t SINE B2 1 180 -13 1 1058 644 67 0 11 chr13 62004387 62004478 -58279834 + (GAAA)n Simple_repeat Simple_repeat 2 91 0 1 1058 21 0 0 0 chr13 62004491 62004512 -58279800 + AT_rich Low_complexity Low_complexity 1 21 0 1 1058 348 325 128 7 chr13 62004553 62004832 -58279480 + MT2A LTR ERVL 169 533 0 1 1058 321 253 45 22 chr13 62005369 62005458 -58278854 + RLTR23 LTR ERV1 337 427 -3 2 1058 264 241 7 27 chr13 62005650 62005799 -58278513 + GA-rich Low_complexity Low_complexity 2 147 0 2 1058 22 35 0 0 chr13 62007806 62007835 -58276477 + AT_rich Low_complexity Low_complexity 1 29 0 2 1058 27 29 0 0 chr13 62010266 62010300 -58274012 + AT_rich Low_complexity Low_complexity 1 34 0 2 1058 359 248 158 43 chr13 62010379 62010518 -58273794 + B3A SINE B2 52 206 -10 2 1058 243 0 0 0 chr13 62010941 62010968 -58273344 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 1058 1037 70 14 27 chr13 62010968 62011115 -58273197 - B1_Mm SINE Alu -2 145 1 2 1058 536 383 62 37 chr13 62011515 62011889 -58272423 + MTD LTR MaLR 18 400 -19 2 1058 408 262 33 60 chr13 62012176 62012326 -58271986 - B1_Mus2 SINE Alu 0 147 2 2 1058 24 0 0 0 chr13 62012327 62012351 -58271961 + AT_rich Low_complexity Low_complexity 1 24 0 2 1058 426 299 81 40 chr13 62012719 62012800 -58271512 - RLTR20D LTR ERVK -12 556 477 3 1058 360 0 0 0 chr13 62012800 62012840 -58271472 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1058 405 0 0 0 chr13 62012840 62012884 -58271428 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1058 426 299 81 40 chr13 62012884 62012975 -58271337 - RLTR20D LTR ERVK -92 476 377 3 1058 646 205 0 0 chr13 62012980 62013107 -58271205 - RLTR20D LTR ERVK -441 127 1 3 1058 392 234 11 0 chr13 62013225 62013319 -58270993 + MurSatRep1 Unknown Unknown 1 95 -2042 3 1058 1144 62 14 0 chr13 62013319 62013464 -58270848 + B1_Mm SINE Alu 1 147 0 3 1058 418 296 8 0 chr13 62013539 62013671 -58270641 - B1_Mur2 SINE Alu -12 137 5 3 1058 6902 208 23 56 chr13 62013686 62013961 -58270351 + MurSatRep1 Unknown Unknown 293 557 -1580 3 1058 1110 83 14 0 chr13 62013961 62014106 -58270206 + B1_Mm SINE Alu 1 147 0 3 1058 6902 208 23 56 chr13 62014106 62014640 -58269672 + MurSatRep1 Unknown Unknown 558 1048 -1089 3 1058 998 115 0 0 chr13 62014640 62014779 -58269533 + B1_Mus1 SINE Alu 1 139 -9 3 1058 6902 208 23 56 chr13 62014779 62015865 -58268447 + MurSatRep1 Unknown Unknown 1049 2126 -11 3 1058 286 308 20 20 chr13 62016054 62016203 -58268109 + MMSAT4 Satellite Satellite 20 168 0 3 1058 284 363 20 15 chr13 62016172 62016376 -58267936 + MurSatRep1 Unknown Unknown 1845 2049 -88 4 1058 544 251 6 5 chr13 62016240 62017121 -58267191 + MMSAT4 Satellite Satellite 1 882 0 4 1058 232 342 26 20 chr13 62017062 62017214 -58267098 + MurSatRep1 Unknown Unknown 1896 2048 -89 4 1058 234 281 17 26 chr13 62017547 62017664 -58266648 + MMSAT4 Satellite Satellite 53 168 0 4 1058 478 331 8 0 chr13 62017675 62017796 -58266516 - ORR1D2 LTR MaLR -193 177 56 4 1058 409 242 40 0 chr13 62020741 62020840 -58263472 - B1F SINE Alu -38 111 9 4 1058 615 96 273 52 chr13 62020882 62021036 -58263276 + B2_Mm1t SINE B2 1 188 -5 4 1058 331 267 29 29 chr13 62021334 62021438 -58262874 + RLTR23 LTR ERV1 311 414 -16 4 1058 252 0 0 0 chr13 62021559 62021587 -58262725 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 4 1058 1135 38 0 0 chr13 62021590 62021723 -58262589 - B1_Mus2 SINE Alu -14 133 1 4 1058 591 196 0 0 chr13 62021854 62022017 -58262295 + GA-rich Low_complexity Low_complexity 2 164 0 5 1058 227 152 0 0 chr13 62022019 62022052 -58262260 + G-rich Low_complexity Low_complexity 1 33 0 5 1058 3172 115 8 31 chr13 62022441 62022952 -58261360 + RLTR1C LTR ERV1 1 499 -4 5 1058 1059 83 0 14 chr13 62023394 62023529 -58260783 + B1_Mus2 SINE Alu 3 137 -10 5 1058 225 65 0 0 chr13 62023529 62023560 -58260752 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1058 1059 83 0 14 chr13 62023560 62023571 -58260741 + B1_Mus2 SINE Alu 138 147 0 5 1058 861 10 0 0 chr13 62023838 62023936 -58260376 + (TTC)n Simple_repeat Simple_repeat 2 99 0 5 1058 1008 128 0 0 chr13 62023938 62024079 -58260233 - B1_Mus1 SINE Alu -6 142 2 5 1058 346 174 309 50 chr13 62026675 62026814 -58257498 + RMER10A LTR ERVL 4 178 -264 5 1058 398 255 95 49 chr13 62026955 62026970 -58257342 + B3A SINE B2 8 34 -164 5 1058 234 176 211 42 chr13 62026970 62027041 -58257271 + B4A SINE B4 2 84 -208 5 1058 398 255 95 49 chr13 62027041 62027108 -58257204 + B3A SINE B2 35 164 -34 5 1058 28 71 0 0 chr13 62027372 62027428 -58256884 + AT_rich Low_complexity Low_complexity 1 56 0 6 1058 554 67 0 0 chr13 62028178 62028253 -58256059 + B1_Mus2 SINE Alu 73 147 0 6 1058 245 325 82 31 chr13 62028519 62028678 -58255634 + ORR1D-int LTR MaLR 6 172 -1198 6 1058 1626 299 72 25 chr13 62028882 62029209 -58255103 + ORR1D-int LTR MaLR 666 993 -377 6 1058 1158 50 0 0 chr13 62029209 62029348 -58254964 + B1_Mm SINE Alu 1 139 -8 6 1058 612 0 0 0 chr13 62029348 62029416 -58254896 + (GA)n Simple_repeat Simple_repeat 2 69 0 6 1058 1626 299 72 25 chr13 62029416 62029754 -58254558 + ORR1D-int LTR MaLR 994 1362 -8 6 1058 245 301 98 0 chr13 62030286 62030419 -58253893 - B1_Mus2 SINE Alu 0 147 2 6 1058 478 373 12 0 chr13 62030662 62030831 -58253481 - B3 SINE B2 -19 197 27 6 1058 449 316 124 94 chr13 62030833 62030915 -58253397 - RLTR20D LTR ERVK 0 505 398 6 1058 438 20 0 0 chr13 62030915 62030966 -58253346 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1058 1671 256 68 6 chr13 62030966 62031401 -58252911 - RLTR20D LTR ERVK -112 456 1 6 1058 520 259 7 0 chr13 62031526 62031673 -58252639 + MurSatRep1 Unknown Unknown 2 149 -1988 6 1058 365 331 8 0 chr13 62031674 62031807 -58252505 - B1_Mur2 SINE Alu -15 134 1 7 1058 6507 205 49 28 chr13 62031819 62032613 -58251699 + MurSatRep1 Unknown Unknown 294 1110 -1027 6 1058 1468 74 5 0 chr13 62032613 62032803 -58251509 + B2_Mm1t SINE B2 1 191 -2 7 1058 6507 205 49 28 chr13 62032803 62033319 -58250993 + MurSatRep1 Unknown Unknown 1111 1620 -517 6 1058 405 0 0 0 chr13 62033319 62033364 -58250948 + (TC)n Simple_repeat Simple_repeat 1 45 0 7 1058 6507 205 49 28 chr13 62033364 62033790 -58250522 + MurSatRep1 Unknown Unknown 1621 2067 -70 6 1058 1232 34 7 0 chr13 62033809 62033955 -58250357 - B1_Mm SINE Alu 0 147 1 7 1058 454 262 13 13 chr13 62034228 62034705 -58249607 + MMSAT4 Satellite Satellite 1 477 0 7 1058 3916 60 22 4 chr13 62034707 62035208 -58249104 + RLTR1B LTR ERV1 3 512 0 7 1058 451 261 9 3 chr13 62035421 62035706 -58248606 + MMSAT4 Satellite Satellite 1 286 0 7 1058 1087 55 13 52 chr13 62035745 62035898 -58248414 + B1_Mus2 SINE Alu 1 147 0 7 1058 348 253 25 35 chr13 62035923 62036113 -58248199 + MMSAT4 Satellite Satellite 1 188 0 7 1058 1044 75 0 0 chr13 62036113 62036247 -58248065 + B1_Mus1 SINE Alu 2 135 -13 7 1058 1183 61 12 0 chr13 62036249 62036414 -58247898 + (GAAA)n Simple_repeat Simple_repeat 3 169 0 8 1058 285 225 27 74 chr13 62036414 62036440 -58247872 + MMSAT4 Satellite Satellite 145 168 0 7 1058 203 169 14 0 chr13 62036625 62036696 -58247616 + GA-rich Low_complexity Low_complexity 1 72 0 8 1058 243 164 127 0 chr13 62037370 62037412 -58246900 - ORR1D2 LTR MaLR 0 370 322 8 1058 835 157 14 0 chr13 62037412 62037559 -58246753 - RLTR11A LTR ERVK 0 528 380 8 1058 30 0 0 0 chr13 62037785 62037815 -58246497 + AT_rich Low_complexity Low_complexity 1 30 0 8 1058 2656 44 14 63 chr13 62038699 62039062 -58245250 + IAPLTR4 LTR ERVK 1 345 0 8 1058 1985 273 55 74 chr13 62039062 62040035 -58244277 + IAPLTR3-int LTR ERVK 1 954 -5867 8 1058 283 192 15 111 chr13 62040009 62040144 -58244168 + MMERVK10C-int LTR ERVK 831 952 -6629 8 1058 991 204 109 82 chr13 62040266 62040767 -58243545 + RMER16-int LTR ERVK 255 668 -5469 8 1058 437 230 88 0 chr13 62040770 62040883 -58243429 + RMER16-int LTR ERVK 938 1060 -5077 8 1058 268 267 0 65 chr13 62040896 62040988 -58243324 + ETnERV3-int LTR ERVK 2454 2539 -4867 8 1058 6491 104 72 7 chr13 62041000 62042370 -58241942 + ETnERV3-int LTR ERVK 2735 4271 -3135 8 1058 530 179 12 0 chr13 62042372 62042491 -58241821 + ETnERV3-int LTR ERVK 2357 2464 -2380 8 1058 579 115 21 10 chr13 62042517 62042614 -58241698 + MMERVK10C-int LTR ERVK 4552 4649 -2932 8 1058 5939 241 37 29 chr13 62042747 62045261 -58239051 + ETnERV3-int LTR ERVK 3468 7329 -351 8 1058 2679 44 3 70 chr13 62045265 62045635 -58238677 + IAPLTR4 LTR ERVK 1 345 0 8 1058 344 310 123 9 chr13 62045752 62045866 -58238446 - B3 SINE B2 -89 127 1 9 1058 698 355 62 0 chr13 62045906 62046196 -58238116 + MTE-int LTR MaLR 1037 1344 -236 9 1058 733 295 107 24 chr13 62046272 62046609 -58237703 + ORR1D2 LTR MaLR 1 365 -5 9 1058 283 218 0 13 chr13 62046801 62046880 -58237432 + Lx2 LINE L1 6912 6989 -8 9 1058 702 222 8 14 chr13 62047033 62047250 -58237062 - RMER17C LTR ERVK 0 410 1 9 1058 1079 88 0 0 chr13 62047278 62047425 -58236887 + B1_Mus1 SINE Alu 2 148 0 9 1058 330 87 0 0 chr13 62047881 62047927 -58236385 + (T)n Simple_repeat Simple_repeat 1 46 0 9 1058 511 261 19 130 chr13 62048060 62048267 -58236045 + B3 SINE B2 9 216 0 9 1058 1184 112 6 22 chr13 62048271 62048433 -58235879 + B2_Mm2 SINE B2 1 160 -35 9 1058 1179 74 0 0 chr13 62048433 62048596 -58235716 + (TAGA)n Simple_repeat Simple_repeat 4 166 0 9 1058 1184 112 6 22 chr13 62048596 62048616 -58235696 + B2_Mm2 SINE B2 161 180 -15 9 1058 239 284 58 19 chr13 62048678 62048782 -58235530 + MT2B LTR ERVL 22 129 -404 1 1058 470 277 102 108 chr13 62048797 62049129 -58235183 + MT2B LTR ERVL 270 599 -2 1 1058 549 181 13 19 chr13 62049972 62050130 -58234182 + GA-rich Low_complexity Low_complexity 3 159 0 1 1058 1204 34 0 26 chr13 62051960 62052111 -58232201 + B1_Mm SINE Alu 1 147 0 1 1058 192 125 0 0 chr13 62052111 62052143 -58232169 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1058 1865 99 31 22 chr13 62052280 62052599 -58231713 + RLTRETN_Mm LTR ERVK 1 322 0 1 1058 18897 163 29 24 chr13 62052599 62059453 -58224859 + ETnERV2-int LTR ERVK 1 7299 -107 1 1058 2009 99 31 22 chr13 62059453 62059772 -58224540 + RLTRETN_Mm LTR ERVK 1 322 0 1 1058 1795 142 38 22 chr13 62059885 62060358 -58223954 - Lx3A LINE L1 -3062 2824 2504 1 1058 3880 86 11 11 chr13 62060343 62060909 -58223403 - Lx3A LINE L1 -3621 2265 1700 1 1058 890 102 0 0 chr13 62060909 62061037 -58223275 - B1_Mus1 SINE Alu -20 128 1 1 1058 235 289 6 26 chr13 62061037 62061085 -58223227 - ORR1B1-int LTR MaLR -863 646 602 1 1058 5630 126 80 42 chr13 62061086 62061536 -58222776 - L1_Mur1 LINE L1 -4483 1403 961 1 1058 2525 60 113 14 chr13 62061536 62061891 -58222421 + RLTR10 LTR ERVK 1 390 0 1 1058 5630 131 105 28 chr13 62061891 62062564 -58221748 - L1_Mur1 LINE L1 -6024 960 205 1 1058 1281 54 0 0 chr13 62063773 62063920 -58220392 - B1_Mus2 SINE Alu 0 147 1 1 1058 339 251 157 25 chr13 62065399 62065547 -58218765 + B3A SINE B2 52 216 0 1 1058 651 26 0 0 chr13 62066175 62066252 -58218060 + (TTC)n Simple_repeat Simple_repeat 3 79 0 1 1058 1251 141 6 0 chr13 62066252 62066429 -58217883 - B2_Mm1t SINE B2 -15 178 1 1 1058 271 389 69 13 chr13 62066636 62066868 -58217444 + MTD LTR MaLR 52 296 -123 1 1058 4732 160 1 19 chr13 62066902 62067672 -58216640 - Lx2 LINE L1 0 6997 6242 1 1058 2807 81 15 30 chr13 62067834 62068241 -58216071 - LTRIS2 LTR ERV1 -163 401 1 1 1058 330 299 25 25 chr13 62068374 62068494 -58215818 + RLTR23 LTR ERV1 311 430 0 1 1058 226 266 8 8 chr13 62068683 62068812 -58215500 + GA-rich Low_complexity Low_complexity 3 131 0 1 1058 205 170 0 60 chr13 62068825 62068875 -58215437 + GA-rich Low_complexity Low_complexity 2 48 0 1 1058 3855 115 26 0 chr13 62069406 62069935 -58214377 - Lx3_Mus LINE L1 0 7009 6467 1 1058 1725 100 4 8 chr13 62069935 62070188 -58214124 - L1_Mur1 LINE L1 -931 4955 4704 1 1058 5520 120 50 12 chr13 62070184 62070395 -58213917 - L1_Mur1 LINE L1 -5686 1298 1090 1 1058 2868 82 141 139 chr13 62070395 62070906 -58213406 + RLTR1B LTR ERV1 1 512 0 1 1058 5520 120 50 12 chr13 62070906 62071610 -58212702 - L1_Mur1 LINE L1 -5895 1089 348 1 1058 692 100 0 0 chr13 62072123 62072223 -58212089 - B1_Mus2 SINE Alu -1 146 47 1 1058 312 283 34 50 chr13 62072128 62072247 -58212065 - ID_B1 SINE B4 -6 218 102 1 1058 2554 184 50 11 chr13 62072247 62072786 -58211526 + L1_Mur1 LINE L1 4248 4807 -1079 1 1058 1128 122 0 0 chr13 62073026 62073173 -58211139 + B1_Mus2 SINE Alu 1 147 0 1 1058 267 79 0 0 chr13 62073173 62073211 -58211101 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1058 3200 67 15 3 chr13 62073222 62073613 -58210699 - MTA_Mm LTR MaLR 0 396 1 1 1058 365 378 83 21 chr13 62073635 62073986 -58210326 + MTE-int LTR MaLR 215 589 -991 1 1058 724 92 4 14 chr13 62073986 62074099 -58210213 + B2_Mm1t SINE B2 2 109 -89 1 1058 212 0 36 0 chr13 62074540 62074568 -58209744 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 1 1058 5955 165 19 31 chr13 62074894 62075970 -58208342 - Lx2A1 LINE L1 -11 6997 5934 1 1058 2956 159 25 4 chr13 62075971 62076605 -58207707 + Lx2A1 LINE L1 5288 5929 -1079 1 1058 737 22 0 11 chr13 62076687 62076779 -58207533 + (TTTTC)n Simple_repeat Simple_repeat 1 91 0 1 1058 1091 96 0 0 chr13 62076779 62076914 -58207398 - B1_Mm SINE Alu -12 135 1 1 1058 195 100 0 0 chr13 62076957 62076987 -58207325 + (GTTTG)n Simple_repeat Simple_repeat 4 33 0 1 1058 203 79 26 0 chr13 62076990 62077028 -58207284 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1058 551 230 6 79 chr13 62077193 62077358 -58206954 - RMER12 LTR ERVK -4 1318 1166 1 1058 388 261 224 26 chr13 62077562 62077595 -58206717 - RMER12 LTR ERVK -92 1230 1189 1 1058 1409 65 42 21 chr13 62077595 62077785 -58206527 + B2_Mm2 SINE B2 2 195 0 1 1058 388 261 224 26 chr13 62077785 62077979 -58206333 - RMER12 LTR ERVK -134 1188 959 1 1058 542 153 46 46 chr13 62078020 62078141 -58206171 - RMER12 LTR ERVK -559 763 642 1 1058 1234 82 0 0 chr13 62078141 62078288 -58206024 + B1_Mus2 SINE Alu 1 147 0 1 1058 1484 197 154 13 chr13 62078317 62078702 -58205610 - RMER12 LTR ERVK -883 439 1 1 1058 248 345 0 0 chr13 62078708 62078795 -58205517 - Lx5 LINE L1 -262 6788 6702 1 1058 611 263 87 59 chr13 62078837 62079198 -58205114 + MT2A LTR ERVL 92 601 0 1 1058 287 244 91 23 chr13 62079736 62079824 -58204488 + RLTR23 LTR ERV1 337 430 0 1 1058 391 229 7 13 chr13 62080015 62080170 -58204142 + GA-rich Low_complexity Low_complexity 3 156 0 1 1058 1108 83 7 0 chr13 62080924 62081068 -58203244 - B1_Mus2 SINE Alu -2 145 1 1 1058 1168 82 0 39 chr13 62081641 62081779 -58202533 + B1_Mm SINE Alu 1 138 -9 1 1058 180 0 0 0 chr13 62081779 62081799 -58202513 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1058 1168 82 0 39 chr13 62081799 62081813 -58202499 + B1_Mm SINE Alu 139 147 0 1 1058 24 32 0 0 chr13 62083408 62083439 -58200873 + AT_rich Low_complexity Low_complexity 1 31 0 1 1058 391 109 0 0 chr13 62083463 62083518 -58200794 - B2_Mm2 SINE B2 -94 101 47 1 1058 1161 112 12 0 chr13 62083553 62083722 -58200590 - B2_Mm1t SINE B2 -22 171 1 1 1058 29 28 0 0 chr13 62084092 62084128 -58200184 + AT_rich Low_complexity Low_complexity 1 36 0 1 1058 1073 137 17 6 chr13 62084249 62084425 -58199887 - B2_Mm1t SINE B2 -14 179 2 1 1058 25 0 0 0 chr13 62085572 62085597 -58198715 + AT_rich Low_complexity Low_complexity 1 25 0 1 1058 716 347 64 45 chr13 62086652 62087011 -58197301 + MTD LTR MaLR 35 400 -19 1 1058 22 0 0 0 chr13 62087292 62087314 -58196998 + AT_rich Low_complexity Low_complexity 1 22 0 1 1058 350 336 8 23 chr13 62087523 62087651 -58196661 - B3 SINE B2 -7 209 84 1 1058 1178 88 0 0 chr13 62087782 62087929 -58196383 - B1_Mus1 SINE Alu 0 148 2 1 1058 1643 247 64 90 chr13 62087930 62088005 -58196307 - RLTR20D LTR ERVK -17 551 465 1 1058 414 57 0 0 chr13 62088005 62088058 -58196254 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1058 1643 247 64 90 chr13 62088058 62088548 -58195764 - RLTR20D LTR ERVK -104 464 1 1 1058 4758 197 35 13 chr13 62088672 62089665 -58194647 + MurSatRep1 Unknown Unknown 1 1015 -1122 1 1058 13951 117 11 8 chr13 62089687 62091878 -58192434 - L1_Mus3 LINE L1 -1 6637 4439 1 1058 1338 117 16 0 chr13 62091878 62092066 -58192246 - B2_Mm1t SINE B2 -1 192 2 1 1058 13951 138 11 8 chr13 62092066 62092904 -58191408 - L1_Mus3 LINE L1 -1445 4438 3603 1 1058 4893 220 21 12 chr13 62092891 62094020 -58190292 + MurSatRep1 Unknown Unknown 988 2126 -11 1 1058 425 281 20 20 chr13 62094215 62094364 -58189948 + MMSAT4 Satellite Satellite 20 168 0 1 1058 375 335 19 15 chr13 62094247 62094453 -58189859 + MurSatRep1 Unknown Unknown 1843 2049 -88 1 1058 441 255 47 21 chr13 62094401 62094687 -58189625 + MMSAT4 Satellite Satellite 1 293 -4 1 1058 305 369 31 31 chr13 62094564 62094788 -58189524 + MurSatRep1 Unknown Unknown 1825 2048 -89 1 1058 905 230 45 0 chr13 62095424 62095624 -58188688 - RLTR11A LTR ERVK -3 525 317 1 1058 234 0 0 0 chr13 62096667 62096693 -58187619 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1058 1072 58 7 0 chr13 62096693 62096831 -58187481 - B1_Mus1 SINE Alu 0 148 10 1 1058 248 276 0 8 chr13 62096732 62096856 -58187456 - ORR1B1-int LTR MaLR -755 754 632 1 1058 1047 122 0 39 chr13 62097730 62097869 -58186443 + B1_Mus1 SINE Alu 1 139 -9 1 1058 774 56 0 0 chr13 62097869 62097977 -58186335 + (CAAAC)n Simple_repeat Simple_repeat 2 109 0 1 1058 1047 122 0 39 chr13 62097977 62097991 -58186321 + B1_Mus1 SINE Alu 140 148 0 1 1058 1844 138 91 0 chr13 62098174 62098471 -58185841 + ORR1A2 LTR MaLR 1 324 -3 1 1058 967 123 166 0 chr13 62098590 62098753 -58185559 - B2_Mm1t SINE B2 -2 191 2 1 1058 2392 229 73 11 chr13 62098980 62099531 -58184781 - Lx5 LINE L1 -135 6915 6331 1 1058 414 0 0 0 chr13 62099539 62099585 -58184727 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1058 191 81 54 0 chr13 62099601 62099638 -58184674 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 1 1058 394 241 53 29 chr13 62099641 62099850 -58184462 - RMER17C LTR ERVK -136 274 61 1 1058 537 291 9 75 chr13 62099851 62100078 -58184234 - Lx5 LINE L1 -744 6306 6095 1 1058 312 290 61 71 chr13 62100079 62100276 -58184036 - RLTR46 LTR ERVK 0 320 126 1 1058 3287 211 31 26 chr13 62100455 62100978 -58183334 - Lx5 LINE L1 -1048 6002 5459 1 1058 1123 90 0 7 chr13 62100978 62101124 -58183188 - B1_Mus2 SINE Alu 0 147 3 1 1058 3287 207 32 33 chr13 62101124 62101480 -58182832 - Lx5 LINE L1 -419 5458 5117 1 1058 1642 57 0 5 chr13 62101489 62101683 -58182629 - B2_Mm2 SINE B2 -1 194 2 1 1058 259 284 0 29 chr13 62102787 62102856 -58181456 + RSINE1 SINE B4 15 81 -84 1 1058 642 49 0 0 chr13 62102866 62102948 -58181364 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 1 1058 1158 84 14 0 chr13 62102954 62103097 -58181215 - B1_Mm SINE Alu -2 145 1 1 1058 406 308 53 0 chr13 62103530 62103663 -58180649 + B1_Mur2 SINE Alu 10 149 0 1 1058 207 254 28 0 chr13 62104568 62104639 -58179673 + T-rich Low_complexity Low_complexity 2 74 0 1 1058 1227 62 0 0 chr13 62104662 62104808 -58179504 - B1_Mm SINE Alu -1 146 1 1 1058 344 279 87 32 chr13 62104811 62104937 -58179375 - B1_Mur1 SINE Alu -2 147 15 1 1058 221 246 66 0 chr13 62105156 62105217 -58179095 - MIRc SINE MIR -102 166 102 1 1058 255 293 0 0 chr13 62105296 62105354 -58178958 + B4A SINE B4 86 143 -149 1 1058 764 318 47 4 chr13 62106306 62106584 -58177728 + MTE-int LTR MaLR 1055 1344 -236 1 1058 367 309 31 63 chr13 62106734 62106893 -58177419 - RLTR18 LTR ERVK -391 225 72 1 1058 347 281 54 14 chr13 62106970 62107118 -58177194 + Lx9 LINE L1 7346 7499 -145 1 1058 390 312 107 23 chr13 62108777 62108954 -58175358 + B3 SINE B2 24 215 -1 1 1058 548 276 47 16 chr13 62109627 62109756 -58174556 + RNERVK23-int LTR ERVK 7070 7202 -204 1 1058 322 285 56 16 chr13 62110329 62110454 -58173858 + RMER16-int LTR ERVK 181 310 -6934 1 1058 1385 235 93 47 chr13 62110677 62111189 -58173123 + RMER16-int LTR ERVK 241 688 -5449 1 1058 467 221 88 0 chr13 62111176 62111289 -58173023 + RMER16-int LTR ERVK 938 1060 -5077 1 1058 329 281 0 59 chr13 62111302 62111410 -58172902 + ETnERV3-int LTR ERVK 2454 2653 -3155 1 1058 5228 187 84 61 chr13 62111421 62113256 -58171056 + ETnERV3-int LTR ERVK 3583 5533 -1711 1 1058 988 309 9 9 chr13 62113279 62113602 -58170710 + RNERVK23-int LTR ERVK 7506 7828 -389 1 1058 3970 189 30 7 chr13 62113630 62114324 -58169988 + ETnERV2-int LTR ERVK 6493 7202 -204 1 1058 1143 73 7 0 chr13 62114721 62114871 -58169441 - B2_Mm1t SINE B2 -42 151 1 1 1058 301 315 81 0 chr13 62115584 62115695 -58168617 - ID_B1 SINE B4 -10 214 95 1 1058 1100 103 84 12 chr13 62115849 62116016 -58168296 + B2_Mm1a SINE B2 1 179 -14 2 1058 264 130 345 62 chr13 62116061 62116174 -58168138 + B2_Mm2 SINE B2 48 192 -3 2 1058 418 304 92 83 chr13 62116257 62116695 -58167617 + MT2B LTR ERVL 43 601 0 2 1058 796 233 88 25 chr13 62117482 62117720 -58166592 - RLTR22_Mur LTR ERVK 0 1848 1596 2 1058 1172 144 5 5 chr13 62117883 62118079 -58166233 - RLTR22_Mur LTR ERVK -240 1608 1413 2 1058 265 41 82 0 chr13 62118273 62118322 -58165990 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 2 1058 1034 116 7 0 chr13 62118322 62118468 -58165844 - B1_Mus1 SINE Alu 0 148 2 2 1058 234 0 0 0 chr13 62118840 62118866 -58165446 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1058 579 127 9 18 chr13 62119064 62119176 -58165136 - Lx4A LINE L1 -4 7054 6944 2 1058 1381 112 11 0 chr13 62119354 62119542 -58164770 - B2_Mm1t SINE B2 -2 191 2 2 1058 684 107 0 0 chr13 62119953 62120056 -58164256 + (TGGA)n Simple_repeat Simple_repeat 1 103 0 2 1058 292 257 68 0 chr13 62121333 62121407 -58162905 - ID_B1 SINE B4 -9 215 137 2 1058 536 261 71 104 chr13 62121733 62122117 -58162195 + MT2B LTR ERVL 70 575 -26 2 1058 397 212 0 48 chr13 62122970 62123158 -58161154 + GA-rich Low_complexity Low_complexity 2 180 0 2 1058 994 162 65 10 chr13 62125237 62125436 -58158876 - Lx3A LINE L1 0 6981 6772 2 1058 351 177 0 0 chr13 62125429 62125491 -58158821 - MusHAL1 LINE L1 -1131 1581 1520 2 1058 6050 142 65 16 chr13 62125478 62126586 -58157726 - L1_Mur1 LINE L1 -4523 1363 205 2 1059 363 208 174 20 chr13 62129297 62129395 -58154917 + B3A SINE B2 52 164 -34 2 1059 1163 83 7 14 chr13 62130072 62130219 -58154093 - B1_Mus2 SINE Alu 0 147 2 2 1059 949 142 0 7 chr13 62130450 62130599 -58153713 + B1_Mus1 SINE Alu 1 148 0 2 1059 297 247 47 12 chr13 62130696 62130782 -58153530 + MT2B LTR ERVL 41 129 -404 2 1059 503 308 64 94 chr13 62130807 62131137 -58153175 + MT2B LTR ERVL 282 601 0 2 1059 204 231 15 15 chr13 62131422 62131488 -58152824 + GA-rich Low_complexity Low_complexity 1 66 0 2 1059 807 256 60 24 chr13 62131921 62132169 -58152143 - RLTR22_Mur LTR ERVK 0 1848 1592 2 1059 1185 159 5 0 chr13 62132327 62132522 -58151790 - RLTR22_Mur LTR ERVK -240 1608 1413 2 1059 252 0 0 0 chr13 62133048 62133076 -58151236 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1059 566 135 0 19 chr13 62133268 62133374 -58150938 - Lx4A LINE L1 -2 7056 6953 2 1059 279 271 40 50 chr13 62133907 62134008 -58150304 + ORR1D1 LTR MaLR 275 374 0 2 1059 237 293 51 63 chr13 62135448 62135623 -58148689 + RMER2 LTR ERV1 368 540 -27 2 1059 2308 104 19 0 chr13 62136110 62136426 -58147886 + L1_Mus3 LINE L1 6313 6634 -4 2 1059 191 61 30 0 chr13 62136615 62136648 -58147664 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 2 1059 228 67 0 0 chr13 62138130 62138160 -58146152 + (A)n Simple_repeat Simple_repeat 1 30 0 2 1059 319 179 0 0 chr13 62138496 62138552 -58145760 - MTB LTR MaLR 0 400 345 2 1059 249 127 18 35 chr13 62139882 62139939 -58144373 - Lx4B LINE L1 -191 6867 6812 2 1059 698 259 14 48 chr13 62139939 62140146 -58144166 - RMER12 LTR ERVK 0 1322 1123 2 1059 186 43 0 0 chr13 62140572 62140595 -58143717 + (GGAGA)n Simple_repeat Simple_repeat 2 24 0 2 1059 468 91 0 0 chr13 62140653 62140719 -58143593 + (TGGA)n Simple_repeat Simple_repeat 1 66 0 2 1059 977 145 0 20 chr13 62140901 62141042 -58143270 + B1_Mus1 SINE Alu 2 141 -7 2 1059 197 0 71 0 chr13 62141042 62141070 -58143242 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 2 1059 686 119 0 0 chr13 62142071 62142172 -58142140 + B1_Mus2 SINE Alu 47 147 0 2 1059 459 0 0 0 chr13 62142203 62142254 -58142058 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 1059 5656 78 116 1 chr13 62142254 62143063 -58141249 - L1Md_A LINE L1 -12 6570 5669 2 1059 590 158 0 42 chr13 62143063 62143193 -58141119 + B1_Mus2 SINE Alu 5 147 0 2 1059 257 297 68 0 chr13 62143341 62143415 -58140897 - ID_B1 SINE B4 -9 215 137 2 1059 189 74 0 0 chr13 62143722 62143749 -58140563 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1059 1105 99 0 0 chr13 62143754 62143896 -58140416 - B1_Mus2 SINE Alu -5 142 1 2 1059 340 282 66 101 chr13 62143917 62144276 -58140036 + MT2A LTR ERVL 92 599 -2 2 1059 309 278 155 18 chr13 62144580 62144724 -58139588 + B3A SINE B2 43 205 -11 2 1059 288 344 138 14 chr13 62145428 62145646 -58138666 + MTD LTR MaLR 18 262 -157 2 1059 6421 178 6 12 chr13 62145709 62146841 -58137471 - Lx2 LINE L1 0 6997 5873 2 1059 431 36 18 0 chr13 62146842 62146897 -58137415 + MTB LTR MaLR 345 400 0 2 1059 974 167 0 6 chr13 62146897 62147066 -58137246 - L1_Mur1 LINE L1 -793 5093 4926 2 1059 1124 204 5 9 chr13 62147047 62147265 -58137047 + L1VL2 LINE L1 49 265 -6070 2 1059 8020 225 28 49 chr13 62147326 62147419 -58136893 + MurSatRep1 Unknown Unknown 1 72 -2065 2 1059 1137 101 64 12 chr13 62147419 62147590 -58136722 + B2_Mm2 SINE B2 2 181 -14 2 1059 8020 225 28 49 chr13 62147590 62147769 -58136543 + MurSatRep1 Unknown Unknown 73 250 -1887 2 1059 369 43 0 0 chr13 62147769 62147816 -58136496 + (GTTTG)n Simple_repeat Simple_repeat 2 48 0 2 1059 1092 104 0 0 chr13 62147819 62147954 -58136358 - B1_Mus2 SINE Alu -12 135 1 2 1059 8020 225 28 49 chr13 62147954 62148158 -58136154 + MurSatRep1 Unknown Unknown 251 424 -1713 2 1059 1110 153 26 5 chr13 62148158 62148348 -58135964 + B2_Mm2 SINE B2 2 195 0 2 1059 8020 225 28 49 chr13 62148348 62150021 -58134291 + MurSatRep1 Unknown Unknown 425 2112 -25 2 1059 1050 161 5 25 chr13 62150022 62150219 -58134093 + B2_Mm1a SINE B2 1 193 0 2 1059 261 358 21 46 chr13 62150263 62150503 -58133809 + MurSatRep1 Unknown Unknown 1810 2043 -94 2 1059 586 272 5 6 chr13 62150438 62152605 -58131707 + MMSAT4 Satellite Satellite 1 2165 0 2 1059 225 315 78 26 chr13 62152717 62152797 -58131515 + MurSatRep1 Unknown Unknown 1761 1844 -293 2 1059 192 40 0 0 chr13 62152797 62152822 -58131490 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1059 225 315 78 26 chr13 62152822 62152894 -58131418 + MurSatRep1 Unknown Unknown 1845 1921 -216 2 1059 642 281 62 101 chr13 62153503 62153544 -58130768 - ORR1D2 LTR MaLR -1 369 330 2 1059 1616 262 62 31 chr13 62153544 62154056 -58130256 - RLTR11A LTR ERVK 0 528 1 2 1059 642 281 62 101 chr13 62154056 62154210 -58130102 - ORR1D2 LTR MaLR -41 329 169 2 1059 1100 112 0 0 chr13 62154210 62154353 -58129959 + B1_Mus2 SINE Alu 1 143 -4 2 1059 504 0 0 0 chr13 62154354 62154410 -58129902 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 1059 642 281 62 101 chr13 62154410 62154547 -58129765 - ORR1D2 LTR MaLR -202 168 47 2 1059 279 0 0 0 chr13 62155508 62155539 -58128773 + (TTGG)n Simple_repeat Simple_repeat 2 32 0 2 1059 966 136 0 20 chr13 62155549 62155699 -58128613 - B1_Mm SINE Alu 0 147 1 2 1059 194 286 48 0 chr13 62156163 62156226 -58128086 - MIRc SINE MIR -102 166 101 2 1059 231 369 0 73 chr13 62156306 62156429 -58127883 + B1_Mus2 SINE Alu 1 114 -33 2 1059 213 39 0 0 chr13 62157608 62157634 -58126678 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1059 1017 112 0 0 chr13 62157634 62157768 -58126544 - B1_Mus1 SINE Alu -11 137 4 2 1059 1245 93 41 0 chr13 62158452 62158624 -58125688 + B2_Mm1t SINE B2 2 180 -13 2 1059 409 281 50 69 chr13 62158956 62159245 -58125067 + MT2B LTR ERVL 86 531 -70 2 1059 398 129 0 0 chr13 62159247 62159317 -58124995 - B2_Mm1t SINE B2 0 193 124 2 1059 333 0 0 0 chr13 62159367 62159404 -58124908 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 2 1059 1112 103 0 6 chr13 62159404 62159561 -58124751 - B2_Mm2 SINE B2 -38 157 2 2 1059 236 227 78 22 chr13 62159563 62159653 -58124659 + MT2A LTR ERVL 439 533 0 2 1059 287 325 26 26 chr13 62160211 62160328 -58123984 + RLTR23 LTR ERV1 314 430 0 2 1059 242 229 10 0 chr13 62160543 62160639 -58123673 + GA-rich Low_complexity Low_complexity 2 98 0 2 1059 182 91 0 29 chr13 62160652 62160686 -58123626 + (GGA)n Simple_repeat Simple_repeat 2 34 0 2 1059 9408 100 28 21 chr13 62161243 62161653 -58122659 - Lx3_Mus LINE L1 0 7009 6571 2 1059 3569 76 45 4 chr13 62161653 62162116 -58122196 + RLTR45 LTR ERVK 1 482 0 2 1059 9408 100 28 21 chr13 62162116 62162797 -58121515 - Lx3_Mus LINE L1 -439 6570 5908 2 1059 1193 159 0 25 chr13 62162797 62162839 -58121473 - B2_Mm2 SINE B2 0 195 159 2 1059 296 48 0 23 chr13 62162839 62162882 -58121430 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 2 1059 1193 159 0 25 chr13 62162882 62163039 -58121273 - B2_Mm2 SINE B2 -37 158 2 2 1059 9408 81 6 4 chr13 62163039 62164241 -58120071 - Lx3_Mus LINE L1 -1102 5907 4704 2 1059 5604 118 54 7 chr13 62164237 62165145 -58119167 - Lx3_Mus LINE L1 -5686 1298 348 2 1059 716 71 0 0 chr13 62165647 62165746 -58118566 - B1_Mus2 SINE Alu -2 145 47 2 1059 355 250 42 51 chr13 62165651 62165769 -58118543 - ID_B1 SINE B4 -6 218 102 2 1059 2586 176 60 9 chr13 62165769 62166302 -58118010 + L1_Mur1 LINE L1 4248 4807 -1079 2 1059 1095 136 0 0 chr13 62166542 62166689 -58117623 + B1_Mus2 SINE Alu 1 147 0 2 1059 1406 77 33 0 chr13 62166693 62166876 -58117436 + B2_Mm2 SINE B2 1 189 -6 2 1059 3109 77 15 3 chr13 62166924 62167315 -58116997 - MTA_Mm LTR MaLR 0 396 1 2 1059 1224 350 92 71 chr13 62167315 62167689 -58116623 + MTE-int LTR MaLR 194 603 -977 2 1059 1567 88 0 0 chr13 62167689 62167881 -58116431 + B2_Mm1t SINE B2 2 193 0 2 1059 1224 350 92 71 chr13 62167881 62168470 -58115842 + MTE-int LTR MaLR 604 1155 -425 2 1059 1104 110 0 14 chr13 62168470 62168618 -58115694 + B1_Mus2 SINE Alu 2 147 0 2 1059 1224 350 92 71 chr13 62168618 62168955 -58115357 + MTE-int LTR MaLR 1156 1521 -59 2 1059 303 263 108 43 chr13 62169299 62169438 -58114874 - B1_Mur3 SINE Alu 0 149 2 2 1059 260 406 38 0 chr13 62169717 62169850 -58114462 - B3A SINE B2 -34 164 27 2 1059 1085 247 26 43 chr13 62169852 62170149 -58114163 - RLTR20D LTR ERVK 0 568 290 2 1059 1166 89 7 0 chr13 62170167 62170313 -58113999 - B1_Mus1 SINE Alu 0 148 2 2 1059 538 216 0 0 chr13 62170314 62170416 -58113896 - RLTR20D LTR ERVK -466 102 1 2 1059 14252 113 69 12 chr13 62170520 62171990 -58112322 + L1_Mus1 LINE L1 3604 5169 -714 2 1059 1132 103 0 20 chr13 62171990 62172139 -58112173 + B1_Mus2 SINE Alu 2 147 0 2 1059 14252 74 4 4 chr13 62172139 62173548 -58110764 + L1_Mus1 LINE L1 5170 6565 -2 2 1059 551 181 26 0 chr13 62173594 62173710 -58110602 + MurSatRep1 Unknown Unknown 29 147 -1990 2 1059 477 276 22 7 chr13 62173710 62173845 -58110467 - B1_Mur2 SINE Alu -12 137 1 2 1059 1107 167 23 19 chr13 62173856 62174070 -58110242 + MurSatRep1 Unknown Unknown 293 507 -1630 2 1059 746 41 10 0 chr13 62174086 62174184 -58110128 + (TTTC)n Simple_repeat Simple_repeat 3 101 0 3 1059 811 102 17 0 chr13 62174191 62174309 -58110003 - B1_Mus2 SINE Alu 0 147 28 3 1059 306 145 43 0 chr13 62174309 62174378 -58109934 - L1_Mur3 LINE L1 -4286 1594 1523 3 1059 438 139 0 0 chr13 62174396 62174468 -58109844 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 1059 268 233 40 14 chr13 62174473 62174547 -58109765 - ORR1D2 LTR MaLR -244 130 55 3 1059 3128 87 20 162 chr13 62175191 62175753 -58108559 + RLTR45 LTR ERVK 1 482 0 3 1059 1542 50 33 0 chr13 62176161 62176341 -58107971 - B2_Mm1t SINE B2 -6 187 2 3 1059 276 200 0 0 chr13 62176666 62176741 -58107571 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1059 282 116 0 0 chr13 62177004 62177047 -58107265 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1059 917 131 20 0 chr13 62177079 62177232 -58107080 - B2_Mm1t SINE B2 -1 192 37 3 1059 250 284 0 63 chr13 62177288 62177367 -58106945 + RSINE1 SINE B4 8 81 -84 3 1059 231 58 36 55 chr13 62177871 62177926 -58106386 + (TTTTTG)n Simple_repeat Simple_repeat 1 54 0 3 1059 3282 212 53 12 chr13 62179419 62180153 -58104159 + RLTR25B LTR ERVK 1 764 -264 3 1059 3649 71 32 2 chr13 62180280 62180748 -58103564 + RLTR45 LTR ERVK 1 482 0 3 1059 547 191 26 0 chr13 62180835 62180950 -58103362 + MusHAL1 LINE L1 1407 1524 -1188 3 1059 1288 207 26 4 chr13 62180935 62181207 -58103105 + L1_Mur2 LINE L1 5308 5585 -292 3 1059 5920 171 19 31 chr13 62182061 62183144 -58101168 - Lx2A1 LINE L1 -5 7003 5934 3 1059 1737 174 0 0 chr13 62183145 62183439 -58100873 + Lx2A1 LINE L1 5283 5576 -301 3 1059 4005 30 104 19 chr13 62183439 62183977 -58100335 - RLTR6_Mm LTR ERV1 -70 584 1 3 1059 8953 58 21 25 chr13 62183977 62185753 -58098559 - MMVL30-int LTR ERV1 0 3698 1634 3 1059 4691 14 2 0 chr13 62185753 62186245 -58098067 - MT2_Mm LTR ERVL 0 493 1 3 1059 322 0 0 0 chr13 62186245 62186283 -58098029 - MERVL-int LTR ERVL 0 5485 5448 3 1059 387 167 46 35 chr13 62186283 62186370 -58097942 - ORR1A3-int LTR MaLR -1323 640 553 3 1059 48388 14 6 0 chr13 62186370 62191698 -58092614 - MERVL-int LTR ERVL -125 5360 1 3 1059 4691 14 2 0 chr13 62191698 62192190 -58092122 - MT2_Mm LTR ERVL 0 493 1 3 1059 6474 50 101 34 chr13 62192190 62193230 -58091082 - RLTR6-int LTR ERV1 -1817 1881 772 3 1059 6586 20 46 17 chr13 62193648 62194454 -58089858 - RLTR6-int LTR ERV1 -6949 829 1 3 1059 3690 31 174 19 chr13 62194454 62194978 -58089334 - RLTR6_Mm LTR ERV1 -49 605 1 3 1059 2113 125 31 0 chr13 62194986 62195350 -58088962 + Lx2A1 LINE L1 5587 5970 -612 3 1059 1135 88 0 20 chr13 62195426 62195576 -58088736 - B1_Mm SINE Alu 0 147 1 3 1059 391 126 8 56 chr13 62195599 62195725 -58088587 + T-rich Low_complexity Low_complexity 2 121 0 3 1059 553 224 6 77 chr13 62195882 62196051 -58088261 - RMER12 LTR ERVK 0 1322 1166 3 1059 421 257 224 26 chr13 62196255 62196288 -58088024 - RMER12 LTR ERVK -92 1230 1189 3 1059 1409 65 42 21 chr13 62196288 62196478 -58087834 + B2_Mm2 SINE B2 2 195 0 3 1059 421 257 224 26 chr13 62196478 62196672 -58087640 - RMER12 LTR ERVK -134 1188 959 3 1059 542 147 50 25 chr13 62196713 62196832 -58087480 - RMER12 LTR ERVK -559 763 642 3 1059 1182 95 0 0 chr13 62196834 62196981 -58087331 + B1_Mus2 SINE Alu 1 147 0 3 1059 288 0 0 0 chr13 62196981 62197013 -58087299 + (A)n Simple_repeat Simple_repeat 1 32 0 3 1059 1516 199 157 13 chr13 62197040 62197424 -58086888 - RMER12 LTR ERVK -883 439 1 3 1059 256 333 0 0 chr13 62197430 62197517 -58086795 - Lx5 LINE L1 -262 6788 6702 3 1059 616 261 88 56 chr13 62197559 62197919 -58086393 + MT2A LTR ERVL 92 575 -26 3 1059 234 247 99 66 chr13 62198446 62198537 -58085775 + RLTR23 LTR ERV1 337 430 0 3 1059 282 236 7 20 chr13 62198730 62198881 -58085431 + GA-rich Low_complexity Low_complexity 2 150 0 3 1059 1035 100 7 0 chr13 62199610 62199750 -58084562 - B1_Mus2 SINE Alu -6 141 1 3 1059 228 161 54 0 chr13 62200309 62200323 -58083989 + A-rich Low_complexity Low_complexity 2 15 0 3 1059 1194 82 0 0 chr13 62200323 62200470 -58083842 + B1_Mm SINE Alu 1 147 0 3 1059 228 161 54 0 chr13 62200470 62200511 -58083801 + A-rich Low_complexity Low_complexity 16 59 0 3 1059 1033 144 0 0 chr13 62201058 62201204 -58083108 + B1_Mus2 SINE Alu 2 147 0 3 1059 194 62 31 0 chr13 62201204 62201236 -58083076 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 3 1059 392 102 0 0 chr13 62202211 62202270 -58082042 + B1_Mus2 SINE Alu 89 147 0 3 1059 194 81 0 26 chr13 62202292 62202330 -58081982 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 1059 28 61 0 0 chr13 62202775 62202824 -58081488 + AT_rich Low_complexity Low_complexity 1 49 0 3 1059 1078 143 17 6 chr13 62202937 62203113 -58081199 - B2_Mm1t SINE B2 -14 179 2 3 1059 27 29 0 0 chr13 62204258 62204292 -58080020 + AT_rich Low_complexity Low_complexity 1 34 0 3 1059 1209 88 0 0 chr13 62204521 62204668 -58079644 + B1_Mus2 SINE Alu 1 147 0 3 1059 749 348 65 35 chr13 62205482 62205854 -58078458 + MTD LTR MaLR 18 400 -19 3 1059 22 0 0 0 chr13 62206134 62206156 -58078156 + AT_rich Low_complexity Low_complexity 1 22 0 3 1059 317 352 8 23 chr13 62206365 62206493 -58077819 - B3 SINE B2 -7 209 84 3 1059 1101 82 0 0 chr13 62206610 62206756 -58077556 - B1_Mus1 SINE Alu -1 147 2 3 1059 1737 237 66 89 chr13 62206757 62206833 -58077479 - RLTR20D LTR ERVK -17 551 475 3 1059 460 0 33 0 chr13 62206833 62206893 -58077419 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 1059 1737 237 66 89 chr13 62206893 62207380 -58076932 - RLTR20D LTR ERVK -94 474 2 3 1059 4635 201 34 12 chr13 62207504 62208497 -58075815 + MurSatRep1 Unknown Unknown 1 1015 -1122 3 1059 13916 118 16 12 chr13 62208523 62211563 -58072749 - L1_Mus3 LINE L1 -1 6637 3603 3 1059 4922 220 19 10 chr13 62211563 62212679 -58071633 + MurSatRep1 Unknown Unknown 1001 2126 -11 3 1059 369 292 21 21 chr13 62212876 62213016 -58071296 + MMSAT4 Satellite Satellite 29 168 0 3 1059 376 335 19 15 chr13 62212899 62213105 -58071207 + MurSatRep1 Unknown Unknown 1843 2049 -88 3 1059 454 276 13 13 chr13 62213053 62213347 -58070965 + MMSAT4 Satellite Satellite 1 294 0 3 1059 264 330 45 71 chr13 62213138 62213402 -58070910 + MurSatRep1 Unknown Unknown 1747 2001 -136 3 1059 3099 38 3 0 chr13 62213402 62213747 -58070565 + ORR1A0 LTR MaLR 1 346 0 3 1059 264 330 45 71 chr13 62213747 62213792 -58070520 + MurSatRep1 Unknown Unknown 2002 2047 -90 3 1059 821 250 45 0 chr13 62214432 62214632 -58069680 - RLTR11A LTR ERVK -3 525 317 3 1059 2441 78 119 11 chr13 62215631 62215983 -58068329 + RLTR10 LTR ERVK 1 390 0 3 1059 239 278 114 53 chr13 62216158 62216272 -58068040 - RSINE1 SINE B4 -36 129 9 3 1059 989 128 1 2 chr13 62216933 62217083 -58067229 + B1_Mus1 SINE Alu 1 148 0 3 1059 183 42 0 0 chr13 62217089 62217113 -58067199 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 3 1059 1486 65 27 5 chr13 62217214 62217400 -58066912 - B2_Mm1t SINE B2 -2 191 2 3 1059 1739 155 91 0 chr13 62217523 62217820 -58066492 + ORR1A2 LTR MaLR 1 324 -3 3 1059 947 123 166 0 chr13 62217939 62218102 -58066210 - B2_Mm1t SINE B2 -2 191 2 3 1059 23 0 0 0 chr13 62218187 62218210 -58066102 + AT_rich Low_complexity Low_complexity 1 23 0 3 1059 2427 236 72 10 chr13 62218329 62218908 -58065404 - Lx5 LINE L1 -135 6915 6301 3 1059 450 222 53 29 chr13 62218962 62219171 -58065141 - RMER17C LTR ERVK -136 274 61 3 1059 3282 242 57 18 chr13 62219172 62219950 -58064362 - Lx5 LINE L1 -744 6306 5485 3 1059 207 0 0 0 chr13 62219950 62219973 -58064339 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1059 1166 76 0 7 chr13 62219976 62220121 -58064191 - B1_Mus2 SINE Alu -1 146 3 3 1059 3282 209 44 28 chr13 62220121 62220477 -58063835 - Lx5 LINE L1 -393 5484 5117 3 1059 1625 62 0 5 chr13 62220487 62220681 -58063631 - B2_Mm2 SINE B2 -1 194 2 3 1059 246 286 0 31 chr13 62221773 62221838 -58062474 + RSINE1 SINE B4 19 81 -84 3 1059 1214 67 6 0 chr13 62221847 62222012 -58062300 + (TTTC)n Simple_repeat Simple_repeat 3 168 0 3 1059 1176 70 21 0 chr13 62222018 62222161 -58062151 - B1_Mus1 SINE Alu -2 146 1 3 1059 421 277 75 23 chr13 62222593 62222726 -58061586 + B1_Mur2 SINE Alu 10 149 0 3 1059 208 238 16 0 chr13 62223625 62223721 -58060591 + (TTTG)n Simple_repeat Simple_repeat 1 97 0 3 1059 1190 75 0 0 chr13 62223722 62223868 -58060444 - B1_Mm SINE Alu -1 146 1 3 1059 278 288 84 46 chr13 62223871 62224002 -58060310 - B1_Mur1 SINE Alu -2 147 12 3 1059 239 213 66 0 chr13 62224216 62224277 -58060035 - MIRc SINE MIR -102 166 102 3 1059 272 293 0 0 chr13 62224356 62224414 -58059898 + B4A SINE B4 86 143 -149 3 1059 779 321 47 4 chr13 62225365 62225643 -58058669 + MTE-int LTR MaLR 1055 1344 -236 3 1059 394 263 27 81 chr13 62225803 62225952 -58058360 - RLTR18 LTR ERVK -404 212 72 3 1059 362 274 54 14 chr13 62226029 62226177 -58058135 + Lx9 LINE L1 7346 7499 -145 3 1059 22 56 0 0 chr13 62227791 62227827 -58056485 + AT_rich Low_complexity Low_complexity 1 36 0 3 1059 390 296 113 28 chr13 62227835 62228012 -58056300 + B3 SINE B2 24 215 -1 3 1059 1381 82 49 0 chr13 62228655 62228838 -58055474 - B2_Mm1t SINE B2 -1 192 1 3 1059 274 274 68 0 chr13 62229556 62229629 -58054683 - ID_B1 SINE B4 -10 214 137 3 1059 1110 103 84 12 chr13 62229822 62229989 -58054323 + B2_Mm1a SINE B2 1 179 -14 3 1059 252 189 18 54 chr13 62230034 62230090 -58054222 + B2_Mm2 SINE B2 48 101 -94 3 1059 21 36 0 0 chr13 62230106 62230134 -58054178 + AT_rich Low_complexity Low_complexity 1 28 0 3 1059 451 260 92 121 chr13 62230228 62230668 -58053644 + MT2B2 LTR ERVL 41 584 0 3 1059 866 221 73 28 chr13 62231457 62231704 -58052608 - RLTR22_Mur LTR ERVK 0 1848 1591 3 1059 1202 154 5 0 chr13 62231862 62232057 -58052255 - RLTR22_Mur LTR ERVK -240 1608 1413 3 1059 250 24 47 23 chr13 62232249 62232292 -58052020 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 1059 1007 129 0 13 chr13 62232295 62232444 -58051868 - B1_Mus1 SINE Alu 0 148 2 3 1059 360 0 0 0 chr13 62232816 62232856 -58051456 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1059 584 147 0 10 chr13 62233054 62233157 -58051155 - Lx4A LINE L1 -4 7054 6953 3 1059 1417 105 11 0 chr13 62233338 62233528 -58050784 - B2_Mm1t SINE B2 0 193 2 3 1059 549 115 0 0 chr13 62233939 62234026 -58050286 + (TGGA)n Simple_repeat Simple_repeat 1 87 0 3 1059 292 257 68 0 chr13 62235304 62235378 -58048934 - ID_B1 SINE B4 -9 215 137 4 1059 429 266 33 128 chr13 62235679 62235911 -58048401 + MT2A LTR ERVL 68 435 -166 4 1059 1299 32 6 0 chr13 62235920 62236078 -58048234 + B2_Mm1a SINE B2 2 160 -33 4 1059 279 0 0 0 chr13 62236078 62236109 -58048203 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 4 1059 310 316 33 0 chr13 62236135 62236287 -58048025 + MT2A LTR ERVL 377 533 0 4 1059 461 202 12 29 chr13 62237107 62237280 -58047032 + GA-rich Low_complexity Low_complexity 3 172 0 4 1059 561 167 0 0 chr13 62238427 62238529 -58045783 + A-rich Low_complexity Low_complexity 1 102 0 4 1059 1036 151 55 5 chr13 62239773 62239973 -58044339 - Lx3A LINE L1 0 6981 6772 4 1059 3877 126 114 8 chr13 62239966 62240795 -58043517 - L1_Mur1 LINE L1 -3098 2779 1700 4 1059 948 86 0 0 chr13 62240795 62240923 -58043389 - B1_Mus1 SINE Alu -20 128 1 4 1059 5686 124 108 15 chr13 62240923 62242066 -58042246 - L1_Mur1 LINE L1 -4432 1454 205 4 1059 385 231 158 19 chr13 62245059 62245195 -58039117 + B3A SINE B2 52 205 -11 4 1059 1161 89 7 14 chr13 62245833 62245981 -58038331 - B1_Mus2 SINE Alu 0 147 1 4 1059 975 128 0 7 chr13 62246211 62246360 -58037952 + B1_Mus1 SINE Alu 1 148 0 4 1059 308 247 47 12 chr13 62246454 62246540 -58037772 + MT2B LTR ERVL 41 129 -404 4 1059 494 305 67 94 chr13 62246566 62246895 -58037417 + MT2B LTR ERVL 282 601 0 4 1059 185 65 0 31 chr13 62247181 62247213 -58037099 + (GGA)n Simple_repeat Simple_repeat 1 31 0 4 1059 743 273 60 24 chr13 62247681 62247929 -58036383 - RLTR22_Mur LTR ERVK 0 1848 1592 4 1059 1238 138 5 0 chr13 62248087 62248282 -58036030 - RLTR22_Mur LTR ERVK -240 1608 1413 4 1059 530 164 0 19 chr13 62249018 62249124 -58035188 - Lx4A LINE L1 -2 7056 6953 4 1059 278 237 52 13 chr13 62249681 62249758 -58034554 + ORR1D1 LTR MaLR 295 374 0 4 1059 243 287 51 63 chr13 62251198 62251373 -58032939 + RMER2 LTR ERV1 368 540 -27 4 1059 2275 111 19 0 chr13 62251860 62252176 -58032136 + L1_Mus3 LINE L1 6313 6634 -4 4 1059 208 135 0 0 chr13 62252363 62252400 -58031912 + (T)n Simple_repeat Simple_repeat 1 37 0 4 1059 339 161 0 0 chr13 62254236 62254292 -58030020 - MTB LTR MaLR 0 400 345 4 1059 735 237 5 53 chr13 62255677 62255864 -58028448 - RMER12 LTR ERVK 0 1322 1145 4 1059 366 312 152 43 chr13 62256160 62256391 -58027921 - RMER12 LTR ERVK -126 1196 941 4 1059 549 44 0 0 chr13 62256392 62256460 -58027852 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 4 1059 1025 130 0 20 chr13 62256655 62256797 -58027515 + B1_Mus1 SINE Alu 1 141 -7 4 1059 197 0 71 0 chr13 62256797 62256825 -58027487 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 4 1059 645 140 0 0 chr13 62257827 62257927 -58026385 + B1_Mus2 SINE Alu 47 146 -1 4 132 34973 68 13 4 chr13 62257967 62264109 -58020203 - L1Md_F2 LINE L1 -8 6574 377 4 1060 1008 109 0 0 chr13 62264109 62264246 -58020066 + B1_Mus1 SINE Alu 12 148 0 4 1060 184 30 0 57 chr13 62264248 62264283 -58020029 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 4 1060 310 257 68 0 chr13 62264403 62264477 -58019835 - ID_B1 SINE B4 -9 215 137 4 1060 1166 95 0 0 chr13 62264815 62264962 -58019350 - B1_Mus2 SINE Alu 0 147 1 4 1060 426 284 84 120 chr13 62264983 62265342 -58018970 + MT2B LTR ERVL 92 599 -2 4 1060 308 273 155 18 chr13 62265644 62265788 -58018524 + B3A SINE B2 43 205 -11 4 1060 328 335 138 14 chr13 62266501 62266719 -58017593 + MTD LTR MaLR 18 262 -157 4 1060 7767 172 6 33 chr13 62266782 62268742 -58015570 - Lx2 LINE L1 0 6997 5090 4 1060 3367 53 8 2 chr13 62268742 62269136 -58015176 + MTA_Mm LTR MaLR 1 396 0 4 1060 5198 179 9 10 chr13 62269136 62269315 -58014997 - Lx2 LINE L1 -794 5089 4912 4 1060 1051 217 5 0 chr13 62269292 62269504 -58014808 + L1VL2 LINE L1 53 265 -6070 4 1060 951 229 19 43 chr13 62269565 62269658 -58014654 + MurSatRep1 Unknown Unknown 1 85 -2052 4 1060 1143 111 59 32 chr13 62269658 62269844 -58014468 + B2_Mm2 SINE B2 2 192 -3 4 1060 951 229 19 43 chr13 62269844 62270006 -58014306 + MurSatRep1 Unknown Unknown 86 250 -1887 4 1060 378 94 0 0 chr13 62270007 62270071 -58014241 + (GTTTG)n Simple_repeat Simple_repeat 5 68 0 4 1060 1101 123 0 0 chr13 62270071 62270217 -58014095 - B1_Mus2 SINE Alu -1 146 1 4 1060 7226 226 30 33 chr13 62270229 62270421 -58013891 + MurSatRep1 Unknown Unknown 256 424 -1713 4 1060 1110 153 26 5 chr13 62270421 62270611 -58013701 + B2_Mm2 SINE B2 2 195 0 4 1060 7226 226 30 33 chr13 62270611 62272282 -58012030 + MurSatRep1 Unknown Unknown 425 2112 -25 4 1060 767 158 165 29 chr13 62272283 62272453 -58011859 + B2_Mm1a SINE B2 1 193 0 4 1060 271 360 25 50 chr13 62272497 62272737 -58011575 + MurSatRep1 Unknown Unknown 1810 2043 -94 4 1060 578 278 3 3 chr13 62272672 62274749 -58009563 + MMSAT4 Satellite Satellite 1 2077 0 4 1060 183 114 0 0 chr13 62275031 62275066 -58009246 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1060 2038 115 270 47 chr13 62275528 62275976 -58008336 - RLTR6_Mm LTR ERV1 -70 584 37 4 1060 677 289 53 100 chr13 62276318 62276359 -58007953 - ORR1D2 LTR MaLR -1 369 330 4 1060 1610 262 62 31 chr13 62276359 62276871 -58007441 - RLTR11A LTR ERVK 0 528 1 4 1060 677 289 53 100 chr13 62276871 62277026 -58007286 - ORR1D2 LTR MaLR -41 329 169 4 1060 1101 112 0 0 chr13 62277026 62277169 -58007143 + B1_Mus2 SINE Alu 1 143 -4 4 1060 792 21 0 0 chr13 62277170 62277264 -58007048 + (GA)n Simple_repeat Simple_repeat 1 94 0 4 1060 677 289 53 100 chr13 62277264 62277403 -58006909 - ORR1D2 LTR MaLR -202 168 47 4 1060 192 40 0 0 chr13 62278374 62278399 -58005913 + (TTG)n Simple_repeat Simple_repeat 1 25 0 4 1060 434 112 55 0 chr13 62278399 62278495 -58005817 - B1_Mm SINE Alu 0 149 46 4 1060 213 386 0 73 chr13 62278517 62278640 -58005672 + B1_Mus2 SINE Alu 1 114 -33 4 1060 1605 48 32 0 chr13 62278909 62279096 -58005216 + B2_Mm1a SINE B2 1 193 0 4 1060 1134 72 22 0 chr13 62280027 62280166 -58004146 - B1_Mus2 SINE Alu -1 146 5 4 1060 1279 125 11 0 chr13 62280848 62281032 -58003280 + B2_Mm1t SINE B2 2 187 -6 4 1060 446 250 87 0 chr13 62282260 62282364 -58001948 - B3 SINE B2 -103 113 1 4 1060 214 140 53 0 chr13 62282385 62282442 -58001870 + (TTTG)n Simple_repeat Simple_repeat 1 60 0 4 1060 1141 109 0 0 chr13 62282442 62282589 -58001723 - B1_Mus1 SINE Alu -1 147 1 4 1060 610 351 56 0 chr13 62282626 62282914 -58001398 + MTE-int LTR MaLR 1037 1340 -240 4 1060 412 241 12 171 chr13 62283075 62283245 -58001067 - RLTR18 LTR ERVK -402 214 72 4 1060 295 254 66 33 chr13 62283327 62283449 -58000863 + Lx9 LINE L1 7347 7472 -172 4 1060 21 57 0 0 chr13 62284272 62284307 -58000005 + AT_rich Low_complexity Low_complexity 1 35 0 4 1060 290 246 160 24 chr13 62284360 62284485 -57999827 + B3 SINE B2 75 216 0 4 1060 471 290 108 59 chr13 62284647 62284937 -57999375 + MT2A LTR ERVL 86 531 -70 4 1060 364 116 0 0 chr13 62284938 62285007 -57999305 - B2_Mm1t SINE B2 -1 192 124 4 1060 180 0 0 0 chr13 62285056 62285076 -57999236 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 4 1060 1108 102 0 6 chr13 62285077 62285235 -57999077 - B2_Mm2 SINE B2 -37 158 2 4 1060 269 204 78 22 chr13 62285237 62285327 -57998985 + MT2A LTR ERVL 439 533 0 4 1060 317 308 25 25 chr13 62285882 62286002 -57998310 + RLTR23 LTR ERV1 311 430 0 4 1060 26 0 0 0 chr13 62286070 62286096 -57998216 + AT_rich Low_complexity Low_complexity 1 26 0 4 1060 1272 54 0 0 chr13 62286096 62286243 -57998069 - B1_Mus2 SINE Alu 0 147 1 4 1060 225 230 11 21 chr13 62286374 62286568 -57997744 + GA-rich Low_complexity Low_complexity 1 191 0 4 1060 8010 126 18 78 chr13 62287125 62288245 -57996067 - Lx3A LINE L1 -8 6973 5907 4 1060 1391 97 22 0 chr13 62288245 62288430 -57995882 - B2_Mm1t SINE B2 -2 191 3 4 1060 8010 76 1 13 chr13 62288430 62289061 -57995251 - Lx3A LINE L1 -1075 5906 5314 4 1060 1420 179 58 4 chr13 62289062 62289336 -57994976 - L1_Mur1 LINE L1 -6348 634 346 4 1060 727 71 0 0 chr13 62289853 62289952 -57994360 - B1_Mus2 SINE Alu -2 145 47 4 1060 368 250 42 51 chr13 62289857 62289975 -57994337 - ID_B1 SINE B4 -6 218 102 4 1060 2728 171 48 9 chr13 62289975 62290513 -57993799 + L1_Mur1 LINE L1 4248 4806 -1080 4 1060 1065 143 0 13 chr13 62290754 62290903 -57993409 + B1_Mus2 SINE Alu 1 147 0 4 1060 267 181 0 0 chr13 62290906 62290978 -57993334 + A-rich Low_complexity Low_complexity 1 72 0 4 1060 3104 77 15 3 chr13 62290989 62291380 -57992932 - MTA_Mm LTR MaLR 0 396 1 4 1060 1314 365 76 52 chr13 62291380 62291754 -57992558 + MTE-int LTR MaLR 194 591 -989 4 1060 1470 94 0 30 chr13 62291754 62291952 -57992360 + B2_Mm1t SINE B2 2 193 0 4 1060 1314 365 76 52 chr13 62291952 62292531 -57991781 + MTE-int LTR MaLR 592 1156 -424 4 1060 1117 103 0 27 chr13 62292531 62292681 -57991631 + B1_Mus2 SINE Alu 2 147 0 4 1060 1314 365 76 52 chr13 62292681 62293026 -57991286 + MTE-int LTR MaLR 1157 1524 -56 4 1060 320 278 93 43 chr13 62293367 62293506 -57990806 - B1_Mm SINE Alu 0 147 2 4 1060 325 378 33 7 chr13 62293766 62293918 -57990394 - B3A SINE B2 -16 182 27 4 1060 1041 254 27 44 chr13 62293920 62294217 -57990095 - RLTR20D LTR ERVK 0 568 290 4 1060 1237 62 7 0 chr13 62294235 62294380 -57989932 - B1_Mus1 SINE Alu 0 148 3 4 1060 483 167 52 10 chr13 62294383 62294480 -57989832 - RLTR20D LTR ERVK -467 101 1 4 1060 15791 104 6 7 chr13 62294584 62296151 -57988161 + L1_Mus1 LINE L1 3604 5174 -709 4 1060 1122 116 0 0 chr13 62296151 62296297 -57988015 + B1_Mus2 SINE Alu 2 147 0 4 1060 15791 73 4 2 chr13 62296297 62297692 -57986620 + L1_Mus1 LINE L1 5175 6565 -2 4 1060 561 239 14 0 chr13 62297718 62297856 -57986456 + MurSatRep1 Unknown Unknown 14 153 -1984 4 1060 416 262 31 23 chr13 62297856 62297985 -57986327 - B1_Mur2 SINE Alu -19 130 1 4 1060 1686 165 169 11 chr13 62297996 62298352 -57985960 + MurSatRep1 Unknown Unknown 293 704 -1433 4 1060 813 70 0 0 chr13 62298348 62298448 -57985864 + L1_Mus2 LINE L1 6353 6452 -114 4 1060 2422 188 60 16 chr13 62298448 62298960 -57985352 + RLTR25B LTR ERVK 236 770 -258 4 1060 213 39 0 0 chr13 62298983 62299009 -57985303 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1060 484 159 103 0 chr13 62299161 62299268 -57985044 + L1_Mur3 LINE L1 2615 2732 -3148 4 1060 1328 206 22 4 chr13 62299253 62299526 -57984786 + L1_Mur2 LINE L1 5308 5585 -292 5 1060 964 94 65 7 chr13 62300327 62300466 -57983846 + B1_Mus1 SINE Alu 2 148 0 5 1060 1935 179 9 0 chr13 62300609 62300956 -57983356 - Lx2A1 LINE L1 -3 7005 6656 5 1060 3638 183 17 44 chr13 62301840 62302596 -57981716 - Lx2A1 LINE L1 -339 6669 5934 5 1060 2553 161 56 8 chr13 62302596 62303211 -57981101 + Lx2A1 LINE L1 5291 5953 -1055 5 1060 376 243 111 85 chr13 62303466 62303619 -57980693 - RMER12 LTR ERVK 0 1322 1166 5 1060 363 23 0 0 chr13 62303713 62303757 -57980555 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1060 1061 77 8 0 chr13 62303757 62303887 -57980425 - B1_Mus1 SINE Alu -15 133 3 5 1060 1439 211 155 16 chr13 62303887 62304273 -57980039 - RMER12 LTR ERVK -882 440 1 5 1060 1683 213 17 6 chr13 62304279 62304628 -57979684 - Lx4B LINE L1 -247 6811 6459 5 1060 2859 184 21 0 chr13 62304662 62305183 -57979129 + MurSatRep1 Unknown Unknown 484 1015 -1122 5 1060 234 0 0 0 chr13 62305186 62305212 -57979100 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 5 1060 3343 92 7 16 chr13 62305217 62305667 -57978645 - L1_Mus3 LINE L1 0 6638 6193 5 1060 4519 143 4 4 chr13 62305667 62306416 -57977896 - L1_Mur2 LINE L1 -1532 4345 3597 5 1060 4488 223 27 26 chr13 62306418 62307541 -57976771 + MurSatRep1 Unknown Unknown 1003 2126 -11 5 1060 256 356 22 0 chr13 62307661 62307796 -57976516 + MMSAT4 Satellite Satellite 31 168 0 5 1060 418 281 13 12 chr13 62307814 62308417 -57975895 + MMSAT4 Satellite Satellite 1 603 0 5 1060 685 250 152 0 chr13 62309149 62309333 -57974979 - RLTR11A LTR ERVK 0 528 317 5 1060 211 355 97 35 chr13 62310502 62310616 -57973696 - RSINE1 SINE B4 -36 129 9 5 1060 24 53 0 0 chr13 62310816 62310854 -57973458 + AT_rich Low_complexity Low_complexity 1 38 0 5 1060 1873 128 91 0 chr13 62311457 62311754 -57972558 + ORR1A2 LTR MaLR 1 324 -3 5 1060 1137 133 61 0 chr13 62311870 62312051 -57972261 - B2_Mm1t SINE B2 0 193 2 5 1060 2542 245 22 12 chr13 62312285 62312876 -57971436 - Lx5 LINE L1 -139 6911 6315 5 1060 396 0 0 0 chr13 62312879 62312923 -57971389 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 5 1060 448 188 55 33 chr13 62312923 62313105 -57971207 - RMER17C LTR ERVK -137 273 88 5 1060 3599 224 41 6 chr13 62313105 62314295 -57970017 - Lx5 LINE L1 -719 6331 5086 5 1060 1343 108 43 0 chr13 62314300 62314486 -57969826 - B2_Mm2 SINE B2 0 195 2 5 1060 1765 11 0 16 chr13 62314828 62315019 -57969293 - B2_Mm1a SINE B2 -4 189 2 5 1060 1327 31 0 0 chr13 62315173 62315332 -57968980 + B2_Mm1a SINE B2 2 160 -33 5 1060 288 0 0 0 chr13 62315332 62315364 -57968948 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 5 1060 307 325 0 0 chr13 62315439 62315516 -57968796 + RSINE1 SINE B4 5 81 -84 5 1060 2927 77 141 139 chr13 62315743 62316254 -57968058 - RLTR1B LTR ERV1 0 512 1 5 1060 370 240 52 6 chr13 62316465 62316587 -57967725 + B1_Mur2 SINE Alu 11 147 -2 5 1060 591 15 0 0 chr13 62317436 62317504 -57966808 + (TTC)n Simple_repeat Simple_repeat 2 69 0 5 1060 1237 98 29 11 chr13 62317504 62317679 -57966633 - B2_Mm2 SINE B2 -15 180 3 5 1060 276 158 70 0 chr13 62317938 62317995 -57966317 - MIRc SINE MIR -102 166 106 5 1060 1130 108 0 0 chr13 62318285 62318433 -57965879 + B1_Mus1 SINE Alu 1 148 0 5 1060 940 79 0 0 chr13 62318592 62318719 -57965593 - B1_Mus2 SINE Alu 0 147 21 5 1060 299 306 83 0 chr13 62319580 62319688 -57964624 - ID_B1 SINE B4 -10 214 98 5 1060 399 277 161 123 chr13 62319778 62320281 -57964031 + MT2A LTR ERVL 12 533 0 5 1060 538 223 81 7 chr13 62321067 62321216 -57963096 - RLTR22_Mur LTR ERVK 0 1848 1689 5 1060 237 287 33 33 chr13 62321462 62321552 -57962760 + MT2B LTR ERVL 40 129 -404 5 1060 471 251 97 115 chr13 62321525 62321829 -57962483 + MT2B LTR ERVL 70 529 -72 5 1060 1249 61 0 7 chr13 62321859 62322007 -57962305 - B1_Mm SINE Alu 0 147 1 5 1060 226 243 17 23 chr13 62322892 62323065 -57961247 + GA-rich Low_complexity Low_complexity 3 174 0 5 1060 1119 91 7 14 chr13 62324734 62324879 -57959433 - B1_Mus2 SINE Alu -2 145 2 5 1060 989 122 0 7 chr13 62325110 62325250 -57959062 + B1_Mus2 SINE Alu 1 139 -8 5 1060 198 0 0 0 chr13 62325250 62325272 -57959040 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 5 1060 286 253 48 0 chr13 62325354 62325437 -57958875 + MT2B LTR ERVL 43 129 -404 5 1060 512 288 54 98 chr13 62325463 62325798 -57958514 + MT2B LTR ERVL 282 601 0 5 1060 224 59 0 29 chr13 62326083 62326118 -57958194 + (GGA)n Simple_repeat Simple_repeat 1 34 0 5 1060 801 256 60 24 chr13 62326586 62326834 -57957478 - RLTR22_Mur LTR ERVK 0 1848 1592 5 1060 1130 151 21 0 chr13 62326991 62327183 -57957129 - RLTR22_Mur LTR ERVK -240 1608 1413 5 1060 534 154 0 19 chr13 62327940 62328046 -57956266 - Lx4A LINE L1 -2 7056 6953 5 1060 265 250 52 13 chr13 62328602 62328679 -57955633 + ORR1D1 LTR MaLR 295 374 0 5 1060 252 287 51 63 chr13 62330133 62330308 -57954004 + RMER2 LTR ERV1 368 540 -27 5 1060 4182 65 106 0 chr13 62330372 62330882 -57953430 + LTRIS2 LTR ERV1 1 564 0 5 1060 1455 132 0 0 chr13 62331351 62331564 -57952748 + L1_Mus3 LINE L1 6313 6525 -113 5 1060 5552 142 4 5 chr13 62331563 62332391 -57951921 - Lx LINE L1 -740 5914 5090 5 1060 3409 56 5 0 chr13 62332391 62332785 -57951527 + MTA_Mm LTR MaLR 1 396 0 5 1060 5552 168 4 8 chr13 62332785 62332956 -57951356 - Lx LINE L1 -794 5089 4921 5 1060 1125 193 5 0 chr13 62332941 62333153 -57951159 + L1VL2 LINE L1 53 265 -6070 5 1060 7585 225 31 63 chr13 62333214 62333307 -57951005 + MurSatRep1 Unknown Unknown 1 72 -2065 5 1060 1358 74 17 11 chr13 62333307 62333485 -57950827 + B2_Mm2 SINE B2 2 180 -15 5 1060 7585 225 31 63 chr13 62333485 62333688 -57950624 + MurSatRep1 Unknown Unknown 73 253 -1884 5 1060 1068 116 7 0 chr13 62333688 62333834 -57950478 - B1_Mus1 SINE Alu -1 147 1 5 1060 7585 225 31 63 chr13 62333834 62333907 -57950405 + MurSatRep1 Unknown Unknown 254 301 -1836 5 1060 1632 48 16 0 chr13 62333907 62334096 -57950216 - B2_Mm1a SINE B2 0 193 2 5 1060 7585 225 31 63 chr13 62334096 62334238 -57950074 + MurSatRep1 Unknown Unknown 302 439 -1698 5 1060 1109 165 21 5 chr13 62334238 62334427 -57949885 + B2_Mm2 SINE B2 2 193 -2 5 1060 7585 225 31 63 chr13 62334427 62336093 -57948219 + MurSatRep1 Unknown Unknown 440 2112 -25 5 1060 767 158 165 29 chr13 62336094 62336264 -57948048 + B2_Mm1a SINE B2 1 193 0 5 1060 273 340 66 35 chr13 62336308 62336625 -57947687 + MurSatRep1 Unknown Unknown 1810 2136 -1 5 1060 587 275 10 12 chr13 62336474 62337550 -57946762 + MMSAT4 Satellite Satellite 1 1074 0 5 1060 206 118 0 0 chr13 62337734 62337768 -57946544 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1060 730 326 60 44 chr13 62338453 62338494 -57945818 - ORR1D2 LTR MaLR -1 369 330 5 1060 1624 270 61 27 chr13 62338494 62339005 -57945307 - RLTR11A LTR ERVK 0 528 1 5 1060 730 326 60 44 chr13 62339005 62339160 -57945152 - ORR1D2 LTR MaLR -41 329 168 5 1060 1130 116 0 0 chr13 62339160 62339307 -57945005 + B1_Mus2 SINE Alu 1 147 0 5 1060 684 45 0 0 chr13 62339307 62339395 -57944917 + (GA)n Simple_repeat Simple_repeat 2 89 0 5 1060 730 326 60 44 chr13 62339395 62339514 -57944798 - ORR1D2 LTR MaLR -203 167 48 5 1060 213 39 0 0 chr13 62340486 62340512 -57943800 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1060 1051 110 14 0 chr13 62340518 62340663 -57943649 - B1_Mm SINE Alu 0 147 1 5 1060 209 270 48 0 chr13 62341126 62341189 -57943123 - MIRc SINE MIR -102 166 101 5 1060 210 386 0 73 chr13 62341269 62341392 -57942920 + B1_Mus2 SINE Alu 1 114 -33 5 1060 1112 70 14 0 chr13 62342568 62342710 -57941602 - B1_Mus1 SINE Alu 0 148 5 5 1060 236 326 68 27 chr13 62342853 62343001 -57941311 - ID_B1 SINE B4 0 224 71 5 1060 1360 98 11 0 chr13 62343411 62343594 -57940718 + B2_Mm1t SINE B2 2 186 -7 5 1060 319 263 189 0 chr13 62344832 62344927 -57939385 - B3 SINE B2 -103 113 1 5 1060 743 316 47 7 chr13 62344978 62345252 -57939060 + MTE-int LTR MaLR 1056 1340 -240 5 1060 225 224 20 0 chr13 62345419 62345468 -57938844 - RLTR18 LTR ERVK -407 209 160 5 1060 320 252 73 47 chr13 62345660 62345810 -57938502 + Lx9 LINE L1 7346 7499 -145 5 1060 258 32 0 0 chr13 62346181 62346212 -57938100 + (G)n Simple_repeat Simple_repeat 1 31 0 5 1060 22 56 0 0 chr13 62346707 62346743 -57937569 + AT_rich Low_complexity Low_complexity 1 36 0 5 1060 370 183 167 48 chr13 62346787 62346913 -57937399 + B3 SINE B2 75 215 -1 5 1060 204 67 0 0 chr13 62348120 62348150 -57936162 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 5 1060 1021 125 0 7 chr13 62348150 62348290 -57936022 - B1_Mus1 SINE Alu -3 145 6 5 1060 23 0 0 0 chr13 62348300 62348323 -57935989 + AT_rich Low_complexity Low_complexity 1 23 0 5 1060 1328 34 0 0 chr13 62348333 62348480 -57935832 + B1_Mus1 SINE Alu 2 148 0 5 1060 41304 12 0 3 chr13 62348583 62353468 -57930844 - L1Md_A LINE L1 0 6582 1716 5 1060 1693 42 5 0 chr13 62353468 62353660 -57930652 - B2_Mm1t SINE B2 0 193 1 5 1060 41304 29 8 24 chr13 62353660 62355375 -57928937 - L1Md_A LINE L1 -4168 1715 30 5 1060 284 272 104 88 chr13 62355380 62355505 -57928807 - ID_B1 SINE B4 0 224 98 5 1060 258 279 35 0 chr13 62355733 62355819 -57928493 + MT2B LTR ERVL 41 129 -404 5 1060 492 265 88 116 chr13 62355843 62356172 -57928140 + MT2B LTR ERVL 282 601 0 5 1060 203 61 0 29 chr13 62356458 62356492 -57927820 + (GGA)n Simple_repeat Simple_repeat 2 34 0 5 1060 874 253 48 28 chr13 62356960 62357212 -57927100 - RLTR22_Mur LTR ERVK 0 1848 1592 5 1060 1142 149 10 5 chr13 62357371 62357566 -57926746 - RLTR22_Mur LTR ERVK -240 1608 1413 5 1060 1436 88 11 0 chr13 62357964 62358146 -57926166 + B2_Mm1t SINE B2 3 186 -7 5 1060 462 250 36 79 chr13 62359073 62359238 -57925074 - RLTR43A LTR ERVK 0 375 218 5 1060 1276 37 12 0 chr13 62359228 62359391 -57924921 + B2_Mm1a SINE B2 27 191 -2 5 1060 1110 132 25 45 chr13 62360689 62360729 -57923583 - B2_Mm2 SINE B2 0 195 160 5 1060 180 0 0 0 chr13 62360729 62360749 -57923563 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 5 1060 1110 132 25 45 chr13 62360749 62360906 -57923406 - B2_Mm2 SINE B2 -36 159 2 5 1060 1248 62 0 0 chr13 62360924 62361070 -57923242 - B1_Mus2 SINE Alu 0 147 2 5 1060 424 253 173 13 chr13 62361148 62361304 -57923008 + ORR1D2 LTR MaLR 190 370 0 5 1060 1191 121 47 42 chr13 62361921 62362111 -57922201 + B2_Mm2 SINE B2 2 192 -3 5 1060 1283 41 0 7 chr13 62362191 62362337 -57921975 - B1_Mus2 SINE Alu -1 146 2 5 1060 549 0 0 0 chr13 62362362 62362423 -57921889 + (TTA)n Simple_repeat Simple_repeat 2 62 0 5 1060 1200 72 0 0 chr13 62362429 62362568 -57921744 - B1_Mus1 SINE Alu -9 139 1 5 1060 5576 163 46 19 chr13 62362576 62363562 -57920750 - Lx4A LINE L1 0 7058 6047 6 1060 505 304 82 69 chr13 62363813 62364020 -57920292 + MT2A LTR ERVL 33 250 -283 6 1060 1235 75 0 0 chr13 62364020 62364167 -57920145 + B1_Mus1 SINE Alu 2 148 0 6 1060 649 288 42 15 chr13 62364167 62364402 -57919910 + MT2A LTR ERVL 251 533 0 6 1060 271 250 36 0 chr13 62365327 62365411 -57918901 - L1MC LINE L1 -1103 5043 4957 6 1060 1044 53 105 0 chr13 62365716 62365849 -57918463 + B1_Mus1 SINE Alu 2 148 0 6 1060 381 93 0 0 chr13 62365849 62365903 -57918409 + (GAA)n Simple_repeat Simple_repeat 2 55 0 6 1060 429 20 0 0 chr13 62366279 62366329 -57917983 + (TTGG)n Simple_repeat Simple_repeat 2 51 0 6 1060 1017 106 0 28 chr13 62366329 62366468 -57917844 - B1_Mus2 SINE Alu -8 139 3 6 1060 1161 96 0 0 chr13 62366856 62367002 -57917310 - B1_Mus1 SINE Alu 0 148 3 6 1060 27 0 0 0 chr13 62367006 62367033 -57917279 + AT_rich Low_complexity Low_complexity 1 27 0 6 1060 309 26 0 0 chr13 62367206 62367244 -57917068 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1060 1222 56 0 0 chr13 62367244 62367386 -57916926 - B1_Mus1 SINE Alu -6 142 1 6 1060 299 91 0 0 chr13 62367390 62367434 -57916878 - L1_Mur3 LINE L1 -1303 4574 4531 6 1060 2790 213 180 18 chr13 62367430 62368314 -57915998 - L1_Mur3 LINE L1 -1467 4410 3384 6 1060 2102 201 115 38 chr13 62368353 62368664 -57915648 - L1_Mur3 LINE L1 -3528 2352 1997 6 1060 248 53 26 0 chr13 62368664 62368702 -57915610 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1060 2102 201 115 38 chr13 62368702 62368867 -57915445 - L1_Mur3 LINE L1 -3884 1996 1829 6 1060 1211 62 7 14 chr13 62368867 62369015 -57915297 - B1_Mus2 SINE Alu 0 147 1 6 1060 2102 201 115 38 chr13 62369015 62369138 -57915174 - L1_Mur3 LINE L1 -4052 1828 1707 6 1060 1427 104 5 15 chr13 62369138 62369334 -57914978 - B2_Mm2 SINE B2 -1 194 1 6 1060 423 189 81 19 chr13 62369344 62369606 -57914706 - L1_Mur3 LINE L1 -5792 1294 1041 6 1060 1266 100 10 50 chr13 62369606 62369658 -57914654 - B2_Mm1t SINE B2 -1 192 146 6 1060 4383 109 167 18 chr13 62369658 62370430 -57913882 + RMER17D LTR ERVK 1 887 -2 6 1060 1266 100 10 50 chr13 62370430 62370577 -57913735 - B2_Mm1t SINE B2 -48 145 1 6 1060 412 225 83 8 chr13 62370577 62370609 -57913703 - L1_Mur3 LINE L1 -6612 1116 1077 6 1060 3312 61 2 5 chr13 62370609 62371006 -57913306 + MTA_Mm LTR MaLR 1 396 0 6 1060 412 225 83 8 chr13 62371006 62371094 -57913218 - L1_Mur3 LINE L1 -6652 1076 987 6 1060 1101 113 17 6 chr13 62371094 62371277 -57913035 - B2_Mm1t SINE B2 -15 201 1 6 1060 22 0 0 0 chr13 62371369 62371391 -57912921 + AT_rich Low_complexity Low_complexity 1 22 0 6 1060 1950 317 51 48 chr13 62371416 62372254 -57912058 + ORR1E-int LTR MaLR 523 1363 -7 6 1060 497 364 29 4 chr13 62372271 62372511 -57911801 + ORR1E LTR MaLR 10 255 -104 6 1060 532 286 29 0 chr13 62372617 62372757 -57911555 - B1_Mus2 SINE Alu 0 147 4 6 1060 261 0 0 0 chr13 62372758 62372787 -57911525 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1060 524 325 43 29 chr13 62373017 62373226 -57911086 - B3 SINE B2 0 216 5 6 1060 10645 192 22 23 chr13 62373322 62373444 -57910868 + MurSatRep1 Unknown Unknown 1 118 -2019 6 1060 1344 97 16 21 chr13 62373444 62373633 -57910679 - B2_Mm2 SINE B2 -6 189 2 6 1060 10645 192 22 23 chr13 62373633 62375649 -57908663 + MurSatRep1 Unknown Unknown 119 2137 0 6 1060 490 316 30 28 chr13 62375769 62375828 -57908484 + MurSatRep1 Unknown Unknown 1832 2044 -88 6 1060 504 282 16 16 chr13 62375828 62376148 -57908164 + MMSAT4 Satellite Satellite 1 320 0 6 1060 500 326 54 34 chr13 62376137 62376489 -57907823 + MurSatRep1 Unknown Unknown 1691 2049 -88 6 1060 627 239 7 11 chr13 62376258 62376650 -57907662 + MMSAT4 Satellite Satellite 1 390 0 6 1060 1119 105 0 0 chr13 62377195 62377338 -57906974 + B1_Mus1 SINE Alu 1 143 -5 6 1060 1280 54 0 0 chr13 62377725 62377872 -57906440 - B1_Mus1 SINE Alu 0 148 2 6 1060 315 286 0 25 chr13 62378180 62378259 -57906053 + RSINE1 SINE B4 5 81 -84 6 1060 392 0 0 20 chr13 62378650 62378699 -57905613 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 6 1060 1181 72 0 0 chr13 62378699 62378837 -57905475 - B1_Mus2 SINE Alu -9 138 1 6 1060 260 284 0 111 chr13 62378899 62378998 -57905314 + MT2B LTR ERVL 168 255 -346 6 1060 532 285 8 0 chr13 62378909 62379039 -57905273 + B1_Mur4 SINE Alu 15 145 -5 6 1060 261 0 0 0 chr13 62379280 62379309 -57905003 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1060 1253 62 0 0 chr13 62379330 62379476 -57904836 - B1_Mm SINE Alu -1 146 1 6 1060 363 299 7 42 chr13 62380269 62380412 -57903900 - B1_Mur1 SINE Alu 0 149 12 6 1060 32 0 0 0 chr13 62380737 62380769 -57903543 + AT_rich Low_complexity Low_complexity 1 32 0 6 1060 284 77 88 79 chr13 62380782 62380847 -57903465 - B2_Mm2 SINE B2 -102 114 46 6 1060 1315 107 11 0 chr13 62380883 62381061 -57903251 - B2_Mm1t SINE B2 -13 180 1 6 1060 328 322 11 0 chr13 62381105 62381192 -57903120 + ID_B1 SINE B4 73 160 -64 6 1060 501 133 0 0 chr13 62381775 62381850 -57902462 + L1_Mm LINE L1 4864 4938 -945 6 1060 15442 70 3 3 chr13 62381851 62383232 -57901080 - L1_Mus1 LINE L1 0 6567 5189 6 1060 1485 154 33 72 chr13 62383232 62383567 -57900745 - RLTRETN_Mm LTR ERVK 0 322 1 6 1060 15442 101 3 6 chr13 62383567 62384961 -57899351 - L1_Mus1 LINE L1 -695 5188 3795 6 1060 4503 54 48 31 chr13 62384961 62385538 -57898774 + LTRIS_Mus LTR ERV1 1 587 0 6 1060 15442 101 3 6 chr13 62385538 62385608 -57898704 - L1_Mus1 LINE L1 -2089 3794 3725 6 1060 3214 111 20 65 chr13 62385608 62386068 -57898244 + L1_Mm LINE L1 4923 5362 -521 6 1060 1184 82 0 0 chr13 62386068 62386215 -57898097 - B1_Mus1 SINE Alu 0 148 2 6 1060 3214 111 20 65 chr13 62386215 62386304 -57898008 + L1_Mm LINE L1 5363 5447 -436 6 1060 929 244 7 106 chr13 62386456 62386740 -57897572 - Lx5 LINE L1 -148 6902 6647 6 1060 2954 92 169 13 chr13 62386765 62387302 -57897010 - RLTR6_Mm LTR ERV1 -33 621 1 6 1060 238 208 0 0 chr13 62387302 62387350 -57896962 - RMER19C LTR ERVK -259 352 305 6 1060 21 0 0 0 chr13 62388193 62388214 -57896098 + AT_rich Low_complexity Low_complexity 1 21 0 6 1060 1992 144 35 73 chr13 62388402 62388643 -57895669 + RLTR9A2 LTR ERVK 1 241 -142 6 1060 1227 55 0 0 chr13 62388643 62388789 -57895523 - B1_Mus2 SINE Alu 0 147 2 6 1060 1992 144 35 73 chr13 62388789 62388945 -57895367 + RLTR9A2 LTR ERVK 242 383 0 6 1060 966 106 42 0 chr13 62389047 62389189 -57895123 - B1_Mus1 SINE Alu 0 148 1 6 1060 198 164 0 0 chr13 62389498 62389553 -57894759 + T-rich Low_complexity Low_complexity 1 55 0 6 1060 1135 56 7 0 chr13 62389554 62389698 -57894614 - B1_Mus2 SINE Alu 0 147 3 6 1060 201 274 0 0 chr13 62389960 62390006 -57894306 + T-rich Low_complexity Low_complexity 19 64 0 6 1060 1097 89 7 0 chr13 62390006 62390152 -57894160 - B1_Mus2 SINE Alu 0 147 1 6 1060 201 274 0 0 chr13 62390152 62390167 -57894145 + T-rich Low_complexity Low_complexity 4 18 0 6 1061 1555 42 16 0 chr13 62390407 62390596 -57893716 + B2_Mm1a SINE B2 2 193 0 6 1061 214 258 48 0 chr13 62390913 62390975 -57893337 + MIRc SINE MIR 102 166 -102 6 1061 233 277 115 25 chr13 62391195 62391317 -57892995 + B1_Mur1 SINE Alu 15 147 -2 6 1061 265 312 0 25 chr13 62391874 62391953 -57892359 - RSINE1 SINE B4 -84 81 5 6 1061 3355 97 13 78 chr13 62393041 62393666 -57890646 - RLTR6_Mm LTR ERV1 -70 584 1 6 1061 8956 47 16 12 chr13 62393666 62394855 -57889457 - MMVL30-int LTR ERV1 0 3698 2079 6 1061 6931 34 76 3 chr13 62394854 62396360 -57887952 - MMVL30-int LTR ERV1 -1311 2387 772 6 1061 381 189 118 40 chr13 62396708 62396860 -57887452 - MMVL30-int LTR ERV1 -7023 533 280 6 1061 6141 21 98 18 chr13 62396854 62397622 -57886690 - RLTR6-int LTR ERV1 -6949 829 1 6 1061 3491 97 12 76 chr13 62397623 62398268 -57886044 - RLTR6_Mm LTR ERV1 -50 604 1 6 1061 543 168 23 23 chr13 62398423 62398551 -57885761 + Lx5 LINE L1 2804 2931 -2946 6 1061 4150 196 16 9 chr13 62398551 62399114 -57885198 + Lx5 LINE L1 3718 4291 -1586 6 1061 1211 42 0 0 chr13 62399114 62399256 -57885056 + B1_Mus1 SINE Alu 1 142 -6 6 1061 270 0 0 0 chr13 62399259 62399289 -57885023 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 6 1061 4150 196 16 9 chr13 62399289 62399603 -57884709 + Lx5 LINE L1 4292 4605 -1272 6 1061 2881 190 32 25 chr13 62399694 62400364 -57883948 + Lx5 LINE L1 5331 6006 -1044 6 1061 1643 38 0 0 chr13 62400364 62400549 -57883763 + B2_Mm1a SINE B2 1 185 -8 6 1061 2881 204 40 75 chr13 62400549 62400909 -57883403 + Lx5 LINE L1 6007 6342 -708 6 1061 1857 265 37 55 chr13 62400902 62401466 -57882846 + Lx5 LINE L1 6497 7050 0 6 1061 1138 48 0 52 chr13 62401551 62401706 -57882606 + B1_Mm SINE Alu 1 147 0 6 1061 2040 109 70 0 chr13 62401778 62402080 -57882232 - ORR1A2 LTR MaLR 0 327 5 6 1061 405 0 0 0 chr13 62402080 62402125 -57882187 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1061 1175 62 0 0 chr13 62402661 62402806 -57881506 + B1_Mus2 SINE Alu 1 145 -2 6 1061 261 128 0 0 chr13 62402809 62402856 -57881456 + (A)n Simple_repeat Simple_repeat 1 47 0 6 1061 571 324 57 36 chr13 62402868 62403074 -57881238 + ORR1D2 LTR MaLR 117 334 -36 6 1061 2052 240 25 0 chr13 62403074 62403586 -57880726 + RLTR11A LTR ERVK 4 528 0 6 1061 571 324 57 36 chr13 62403586 62403626 -57880686 + ORR1D2 LTR MaLR 335 368 -2 6 1061 2137 197 41 45 chr13 62403939 62404583 -57879729 - RLTR31_Mm LTR ERVK 0 584 1 6 1061 1876 128 85 3 chr13 62405164 62405470 -57878842 + IAPEY3_LTR LTR ERVK 1 331 -1 6 1061 54651 90 13 7 chr13 62405470 62412854 -57871458 + IAPEY3-int LTR ERVK 3 7376 -304 6 1061 1245 97 11 0 chr13 62412858 62413034 -57871278 - B2_Mm1t SINE B2 -14 179 2 6 1061 434 253 23 18 chr13 62413045 62413487 -57870825 - MMSAT4 Satellite Satellite -33 444 1 6 1061 421 333 30 34 chr13 62413342 62413578 -57870734 - MurSatRep1 Unknown Unknown -88 2049 1815 6 1061 236 336 0 0 chr13 62413514 62413636 -57870676 - MMSAT4 Satellite Satellite 0 168 47 6 1061 182 37 37 0 chr13 62413648 62413675 -57870637 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 6 1061 1132 37 0 0 chr13 62413675 62413810 -57870502 - B1_Mm SINE Alu -10 137 3 6 1061 8343 196 44 77 chr13 62413812 62414004 -57870308 - MurSatRep1 Unknown Unknown -22 2115 1936 6 1061 1331 106 5 11 chr13 62414004 62414195 -57870117 - B2_Mm2 SINE B2 -4 191 2 6 1061 8343 196 44 77 chr13 62414195 62414657 -57869655 - MurSatRep1 Unknown Unknown -202 1935 1451 6 1061 216 86 0 0 chr13 62414657 62414692 -57869620 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1061 8343 196 44 77 chr13 62414692 62414705 -57869607 - MurSatRep1 Unknown Unknown -687 1450 1434 6 1061 3572 15 2 0 chr13 62414705 62415100 -57869212 + MTA_Mm LTR MaLR 1 396 0 6 1061 9218 37 3 3 chr13 62415100 62416198 -57868114 + MTA_Mm-int LTR MaLR 1 1098 0 6 1061 3572 15 2 0 chr13 62416198 62416593 -57867719 + MTA_Mm LTR MaLR 1 396 0 6 1061 671 108 0 0 chr13 62416593 62416695 -57867617 - B1_Mus1 SINE Alu -14 134 33 6 1061 8343 196 44 77 chr13 62416695 62417331 -57866981 - MurSatRep1 Unknown Unknown -704 1433 769 6 1061 1335 106 26 0 chr13 62417331 62417520 -57866792 + B2_Mm2 SINE B2 1 194 -1 6 1061 8343 196 44 77 chr13 62417520 62418296 -57866016 - MurSatRep1 Unknown Unknown -1369 768 3 6 1061 1243 234 237 24 chr13 62418416 62418789 -57865523 + RLTR20D LTR ERVK 1 476 -92 6 1061 450 36 0 0 chr13 62418789 62418845 -57865467 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1061 288 0 0 0 chr13 62418845 62418876 -57865436 + (GA)n Simple_repeat Simple_repeat 1 32 0 6 1061 1243 234 237 24 chr13 62418876 62418969 -57865343 + RLTR20D LTR ERVK 477 567 -1 6 1061 362 374 18 0 chr13 62418971 62419137 -57865175 + B3 SINE B2 27 195 -21 6 1061 322 317 42 0 chr13 62419375 62419517 -57864795 + B1_Mur3 SINE Alu 2 149 0 6 1061 1035 349 105 54 chr13 62419884 62421067 -57863245 - ORR1D-int LTR MaLR -8 1362 120 6 1061 5061 71 0 42 chr13 62421668 62421879 -57862433 - RLTR22_Mus LTR ERVK -1005 803 601 7 1061 1084 96 14 0 chr13 62421879 62422025 -57862287 + B1_Mus1 SINE Alu 1 148 0 7 1061 5061 71 0 42 chr13 62422025 62422593 -57861719 - RLTR22_Mus LTR ERVK -1208 600 57 7 1061 4809 137 5 21 chr13 62422607 62423655 -57860657 + L1Md_F2 LINE L1 457 1484 -4399 7 1061 31623 65 2 4 chr13 62424133 62426113 -57858199 + L1Md_F2 LINE L1 1471 3444 -2439 7 1061 4198 72 2 4 chr13 62426113 62426660 -57857652 + L1Md_F2 LINE L1 6037 6582 0 7 1061 31623 65 2 4 chr13 62426660 62428800 -57855512 + L1Md_F2 LINE L1 3445 5584 -299 7 1061 8271 42 5 1 chr13 62428801 62429792 -57854520 + L1Md_F2 LINE L1 5587 6581 -1 7 1061 551 55 0 0 chr13 62429792 62429865 -57854447 - RLTR22_Mus LTR ERVK -1735 73 1 7 1061 318 148 0 0 chr13 62430511 62430565 -57853747 + (TCC)n Simple_repeat Simple_repeat 1 54 0 7 1061 1189 98 11 0 chr13 62431493 62431676 -57852636 + B2_Mm2 SINE B2 8 192 -3 7 1061 325 269 127 62 chr13 62431671 62431960 -57852352 - MT2A LTR ERVL -70 531 83 7 1061 434 287 106 5 chr13 62432119 62432308 -57852004 - B3 SINE B2 0 216 9 7 1061 21 36 0 0 chr13 62432315 62432343 -57851969 + AT_rich Low_complexity Low_complexity 1 28 0 7 1061 309 262 63 32 chr13 62433213 62433339 -57850973 - Lx9 LINE L1 -169 7475 7346 7 1061 404 245 12 169 chr13 62433414 62433586 -57850726 + RLTR18 LTR ERVK 65 209 -407 7 1061 995 91 0 0 chr13 62435015 62435147 -57849165 + B1_Mus1 SINE Alu 5 136 -12 7 1061 273 29 0 0 chr13 62435149 62435183 -57849129 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 7 1061 37 23 0 0 chr13 62436488 62436532 -57847780 + AT_rich Low_complexity Low_complexity 1 44 0 7 1061 218 311 81 0 chr13 62437151 62437225 -57847087 - ID_B1 SINE B4 -64 160 81 7 1061 194 182 23 0 chr13 62437304 62437348 -57846964 + MIRc SINE MIR 101 145 -123 7 1061 1091 110 0 0 chr13 62437369 62437515 -57846797 + B1_Mus1 SINE Alu 1 146 -2 7 1061 1507 135 36 80 chr13 62437622 62437959 -57846353 - RLTRETN_Mm LTR ERVK 0 322 1 7 1061 11332 106 17 30 chr13 62437959 62439855 -57844457 - MMETn-int LTR ERVK 0 4844 3219 7 1061 13046 77 2 9 chr13 62439908 62441578 -57842734 - ETnERV-int LTR ERVK -1654 1660 2 7 1061 1506 148 33 72 chr13 62441579 62441914 -57842398 - RLTRETN_Mm LTR ERVK 0 322 1 7 1061 1139 113 51 0 chr13 62442685 62442862 -57841450 - B2_Mm2 SINE B2 -8 187 2 7 1061 36138 39 1 4 chr13 62442967 62449065 -57835247 - L1Md_T LINE L1 0 6585 411 7 1061 337 311 62 62 chr13 62450124 62450254 -57834058 + ORR1D2 LTR MaLR 47 176 -194 7 1061 501 97 0 0 chr13 62450254 62450326 -57833986 + (TC)n Simple_repeat Simple_repeat 2 73 0 7 1061 473 313 46 36 chr13 62450326 62450346 -57833966 + ORR1D2 LTR MaLR 149 168 -202 7 1061 1039 106 0 0 chr13 62450346 62450488 -57833824 - B1_Mus2 SINE Alu -4 143 2 7 1061 473 313 46 36 chr13 62450488 62450644 -57833668 + ORR1D2 LTR MaLR 169 329 -41 7 1061 1600 284 13 24 chr13 62450644 62451178 -57833134 + RLTR11A LTR ERVK 1 528 0 7 1061 473 313 46 36 chr13 62451178 62451219 -57833093 + ORR1D2 LTR MaLR 330 368 -2 7 1061 280 123 0 15 chr13 62451433 62451501 -57832811 + L1_Mus2 LINE L1 6516 6582 0 7 1061 1104 78 0 0 chr13 62451511 62451652 -57832660 + B1_Mus1 SINE Alu 2 142 -6 7 1061 1071 53 15 0 chr13 62451998 62452130 -57832182 - B1_Mm SINE Alu -13 134 1 7 1061 558 0 0 0 chr13 62452316 62452378 -57831934 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 1061 549 261 8 7 chr13 62452654 62453628 -57830684 - MMSAT4 Satellite Satellite -12 975 1 7 1061 1042 167 5 25 chr13 62453849 62454046 -57830266 - B2_Mm1a SINE B2 0 193 1 7 1061 3511 228 31 112 chr13 62454060 62454958 -57829354 - MurSatRep1 Unknown Unknown -36 2101 1196 7 1061 941 65 0 0 chr13 62454958 62455082 -57829230 - B1_Mm SINE Alu -22 125 2 7 1061 3511 228 31 112 chr13 62455082 62455440 -57828872 - MurSatRep1 Unknown Unknown -36 1195 833 7 1061 642 71 0 0 chr13 62455440 62455525 -57828787 + B1_Mm SINE Alu 61 145 -2 7 1061 522 46 0 0 chr13 62455528 62455593 -57828719 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 1061 237 276 0 33 chr13 62455593 62455645 -57828667 - RSINE1 SINE B4 -99 66 15 7 1061 1189 71 112 0 chr13 62456724 62456893 -57827419 + B2_Mm2 SINE B2 2 189 -6 7 1061 2996 204 32 37 chr13 62456919 62457279 -57827033 + Lx5 LINE L1 5122 5484 -393 7 1061 1127 76 0 7 chr13 62457279 62457425 -57826887 + B1_Mus2 SINE Alu 3 147 0 7 1061 258 32 0 0 chr13 62457427 62457458 -57826854 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 7 1061 2996 237 49 28 chr13 62457458 62458271 -57826041 + Lx5 LINE L1 5485 6331 -719 7 1061 376 198 55 33 chr13 62458271 62458454 -57825858 + RMER17C LTR ERVK 88 274 -136 7 1061 191 116 47 0 chr13 62458457 62458500 -57825812 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 7 1061 2315 251 24 3 chr13 62458502 62459087 -57825225 + Lx5 LINE L1 6315 6911 -139 7 1061 891 101 180 12 chr13 62459322 62459483 -57824829 + B2_Mm1t SINE B2 2 189 -4 7 1061 1540 165 91 0 chr13 62459602 62459899 -57824413 - ORR1A2 LTR MaLR -3 324 1 7 1061 366 23 0 0 chr13 62460109 62460152 -57824160 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 7 1061 1016 121 0 0 chr13 62460152 62460293 -57824019 - B1_Mus2 SINE Alu -1 146 6 7 1061 449 266 33 65 chr13 62460157 62460310 -57824002 - B4A SINE B4 -71 221 74 7 1061 245 330 107 50 chr13 62460955 62461076 -57823236 + RSINE1 SINE B4 2 129 -36 7 1061 270 304 13 0 chr13 62462239 62462318 -57821994 + RLTR11A2 LTR ERVK 318 397 -130 7 1061 240 301 113 0 chr13 62462413 62462546 -57821766 + B1_Mur3 SINE Alu 2 149 0 7 1061 528 289 84 0 chr13 62462902 62463092 -57821220 - ORR1D-int LTR MaLR -7 1363 1158 7 1061 4407 16 0 0 chr13 62463774 62464267 -57820045 - MT2_Mm LTR ERVL 0 493 1 7 1061 3966 112 9 72 chr13 62464886 62465579 -57818733 - RLTR13B4 LTR ERVK -154 649 1 7 1061 32 26 0 0 chr13 62465798 62465837 -57818475 + AT_rich Low_complexity Low_complexity 1 39 0 7 1061 245 320 57 113 chr13 62466410 62466551 -57817761 - ID_B1 SINE B4 -11 213 81 7 1061 254 238 48 0 chr13 62466630 62466693 -57817619 + MIRc SINE MIR 101 166 -102 7 1061 857 92 0 25 chr13 62466753 62466875 -57817437 - B1_Mm SINE Alu -27 120 2 7 1061 23 0 0 0 chr13 62467174 62467197 -57817115 + AT_rich Low_complexity Low_complexity 1 23 0 7 1061 547 326 44 94 chr13 62468254 62468354 -57815958 + ORR1D2 LTR MaLR 87 176 -194 7 1061 1021 97 14 7 chr13 62468354 62468500 -57815812 - B1_Mus2 SINE Alu 0 147 1 7 1061 547 326 44 94 chr13 62468500 62468655 -57815657 + ORR1D2 LTR MaLR 177 329 -41 7 1061 1782 245 24 34 chr13 62468655 62469188 -57815124 + RLTR11A LTR ERVK 1 528 0 7 1061 547 326 44 94 chr13 62469188 62469229 -57815083 + ORR1D2 LTR MaLR 330 369 -1 7 1061 575 254 7 7 chr13 62470227 62471309 -57813003 - MMSAT4 Satellite Satellite -5 1321 52 7 1061 428 313 15 10 chr13 62471309 62471506 -57812806 - MurSatRep1 Unknown Unknown -88 2049 1852 7 1061 575 254 7 7 chr13 62471506 62471548 -57812764 - MMSAT4 Satellite Satellite -5 51 1 7 1061 1001 174 15 26 chr13 62471767 62471962 -57812350 - B2_Mm1a SINE B2 0 193 1 7 1061 1973 249 17 40 chr13 62471976 62472674 -57811638 - MurSatRep1 Unknown Unknown -36 2101 1420 7 1061 338 122 0 0 chr13 62472674 62472723 -57811589 - PB1D10 SINE Alu -67 50 2 7 1061 3701 194 34 23 chr13 62472725 62473481 -57810831 - MurSatRep1 Unknown Unknown -931 1206 433 7 1061 1105 139 16 5 chr13 62473481 62473669 -57810643 - B2_Mm2 SINE B2 -4 191 2 7 1061 3701 194 34 23 chr13 62473669 62473808 -57810504 - MurSatRep1 Unknown Unknown -1705 432 302 7 1061 339 303 30 22 chr13 62473829 62473964 -57810348 + B1_Mur2 SINE Alu 2 137 -12 7 1061 1319 63 28 17 chr13 62474042 62474220 -57810092 - B2_Mm2 SINE B2 -14 181 2 7 1061 342 237 21 0 chr13 62474220 62474313 -57809999 - MurSatRep1 Unknown Unknown -2042 95 1 7 1061 254 254 0 0 chr13 62474439 62474498 -57809814 + RLTR20D LTR ERVK 3 61 -507 7 1061 258 30 0 0 chr13 62474498 62474515 -57809797 + (T)n Simple_repeat Simple_repeat 1 17 0 7 1061 1482 42 15 30 chr13 62474515 62474712 -57809600 - B2_Mm2 SINE B2 0 195 2 7 1061 258 30 0 0 chr13 62474712 62474727 -57809585 + (T)n Simple_repeat Simple_repeat 1 15 0 7 1061 4217 33 10 10 chr13 62474809 62475327 -57808985 - L1Md_F3 LINE L1 -1 6583 6066 7 1061 1522 276 67 49 chr13 62475327 62475743 -57808569 + RLTR20D LTR ERVK 50 492 -76 7 1061 231 88 0 0 chr13 62475743 62475777 -57808535 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1061 1522 276 67 49 chr13 62475777 62475824 -57808488 + RLTR20D LTR ERVK 493 525 -43 7 1061 848 148 35 0 chr13 62475824 62475966 -57808346 - B1_Mus1 SINE Alu 0 148 2 7 1061 1522 276 67 49 chr13 62475966 62476011 -57808301 + RLTR20D LTR ERVK 526 568 0 7 1061 411 390 12 0 chr13 62476011 62476179 -57808133 + B3 SINE B2 28 197 -19 7 1061 301 331 98 0 chr13 62476419 62476552 -57807760 + B1_Mus2 SINE Alu 2 147 0 7 1061 435 319 49 2 chr13 62476883 62477063 -57807249 - ORR1D-int LTR MaLR -39 1541 1198 7 1061 1600 47 0 0 chr13 62477960 62478153 -57806159 - B2_Mm1a SINE B2 0 193 1 7 1061 341 223 6 40 chr13 62478902 62479075 -57805237 + CT-rich Low_complexity Low_complexity 3 169 0 7 1061 536 262 97 121 chr13 62479895 62480265 -57804047 - MT2B LTR ERVL 0 601 84 7 1061 273 163 0 0 chr13 62481907 62481956 -57802356 + (TCCA)n Simple_repeat Simple_repeat 3 51 0 7 1061 1217 104 49 0 chr13 62482376 62482559 -57801753 + B2_Mm1t SINE B2 2 193 0 7 1061 558 137 0 19 chr13 62482737 62482841 -57801471 + Lx4A LINE L1 6953 7054 -4 7 1061 924 109 58 0 chr13 62483431 62483568 -57800744 + B1_Mus1 SINE Alu 2 146 -2 7 1061 960 142 108 0 chr13 62483784 62483960 -57800352 + RLTR22_Mus LTR ERVK 1362 1556 -252 7 1061 875 231 64 24 chr13 62484120 62484369 -57799943 + RLTR22_Mur LTR ERVK 1590 1848 0 7 1061 449 303 94 85 chr13 62485155 62485596 -57798716 - MT2B LTR ERVL 0 601 41 7 1061 286 121 351 36 chr13 62485676 62485787 -57798525 - B2_Mm2 SINE B2 -2 193 48 7 1061 1037 92 90 12 chr13 62485827 62485993 -57798319 - B2_Mm1a SINE B2 -14 179 1 7 1061 279 275 100 0 chr13 62486179 62486259 -57798053 + ID_B1 SINE B4 127 214 -10 7 1061 1181 103 48 21 chr13 62487541 62487729 -57796583 + B2_Mm1t SINE B2 1 193 0 7 1061 353 322 102 17 chr13 62488369 62488546 -57795766 - B3 SINE B2 -1 215 24 7 1061 22 56 0 0 chr13 62488554 62488590 -57795722 + AT_rich Low_complexity Low_complexity 1 36 0 7 1061 305 244 66 16 chr13 62490225 62490346 -57793966 - Lx9 LINE L1 -172 7472 7346 7 1061 383 302 31 63 chr13 62490423 62490582 -57793730 + RLTR18 LTR ERVK 72 225 -391 7 1061 781 322 47 4 chr13 62490732 62491009 -57793303 - MTE-int LTR MaLR -236 1344 1056 7 1061 413 279 81 0 chr13 62491061 62491172 -57793140 + B3 SINE B2 2 121 -95 7 1061 1724 121 202 15 chr13 62491382 62491718 -57792594 - LTRIS4 LTR ERV1 0 507 109 8 1061 3575 61 14 24 chr13 62491732 62492233 -57792079 + LTRIS2 LTR ERV1 69 564 0 8 1061 275 204 36 18 chr13 62492233 62492283 -57792029 - LTRIS4 LTR ERV1 -335 172 122 8 1061 222 35 0 0 chr13 62492368 62492383 -57791929 + (A)n Simple_repeat Simple_repeat 1 15 0 8 1061 1262 27 0 0 chr13 62492383 62492530 -57791782 + B1_Mm SINE Alu 1 147 0 8 1061 222 35 0 0 chr13 62492530 62492543 -57791769 + (A)n Simple_repeat Simple_repeat 1 13 0 8 1061 280 276 0 0 chr13 62493802 62493860 -57790452 - B4A SINE B4 -149 143 86 8 1061 243 213 66 0 chr13 62493939 62494000 -57790312 + MIRc SINE MIR 102 166 -102 8 1061 1170 55 0 0 chr13 62494348 62494494 -57789818 + B1_Mm SINE Alu 1 146 -1 8 1061 206 32 32 0 chr13 62494495 62494526 -57789786 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 8 1061 399 306 57 0 chr13 62495487 62495611 -57788701 - B1_Mur2 SINE Alu -2 147 17 8 1061 1103 77 14 0 chr13 62496051 62496194 -57788118 + B1_Mm SINE Alu 1 145 -2 8 1061 782 91 8 0 chr13 62496200 62496321 -57787991 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 8 1061 239 286 0 31 chr13 62496330 62496395 -57787917 - RSINE1 SINE B4 -84 81 19 8 1061 1490 49 5 5 chr13 62497487 62497673 -57786639 + B2_Mm2 SINE B2 2 187 -8 8 1061 2943 202 34 52 chr13 62497689 62498054 -57786258 + Lx5 LINE L1 5117 5484 -393 8 1061 1015 103 0 7 chr13 62498054 62498200 -57786112 + B1_Mus2 SINE Alu 3 147 0 8 1061 2943 238 52 30 chr13 62498200 62499013 -57785299 + Lx5 LINE L1 5485 6320 -730 8 1061 383 203 55 33 chr13 62499027 62499210 -57785102 + RMER17C LTR ERVK 88 274 -136 8 1061 2180 242 74 3 chr13 62499262 62499833 -57784479 + Lx5 LINE L1 6301 6911 -139 8 1061 22 0 0 0 chr13 62499960 62499982 -57784330 + AT_rich Low_complexity Low_complexity 1 22 0 8 1061 930 124 168 0 chr13 62500067 62500228 -57784084 + B2_Mm1t SINE B2 2 189 -4 1 1061 1781 148 91 0 chr13 62500347 62500644 -57783668 - ORR1A2 LTR MaLR -3 324 1 2 1061 230 140 40 0 chr13 62500825 62500875 -57783437 + T-rich Low_complexity Low_complexity 4 55 0 3 1061 950 128 8 2 chr13 62500877 62501026 -57783286 - B1_Mus1 SINE Alu 0 148 1 4 1061 1627 62 0 0 chr13 62501130 62501323 -57782989 - B2_Mm1t SINE B2 0 193 1 5 1061 222 333 88 26 chr13 62501889 62502003 -57782309 + RSINE1 SINE B4 9 129 -36 6 1061 790 255 45 0 chr13 62503165 62503365 -57780947 + RLTR11A LTR ERVK 317 525 -3 7 1061 241 353 43 49 chr13 62504005 62504309 -57780003 - MurSatRep1 Unknown Unknown -89 2048 1747 8 1061 495 271 12 12 chr13 62504100 62504389 -57779923 - MMSAT4 Satellite Satellite -5 289 1 9 1061 310 350 19 15 chr13 62504342 62504548 -57779764 - MurSatRep1 Unknown Unknown -88 2049 1843 1 1061 305 314 21 21 chr13 62504431 62504571 -57779741 - MMSAT4 Satellite Satellite 0 168 29 1 1061 4904 220 19 12 chr13 62504768 62505887 -57778425 - MurSatRep1 Unknown Unknown -11 2126 1001 1 1061 9379 129 39 9 chr13 62505887 62507680 -57776632 + L1_Mus3 LINE L1 3597 5796 -842 1 1061 1663 58 0 0 chr13 62507680 62507871 -57776441 + B2_Mm1t SINE B2 2 192 -1 1 1061 8801 94 9 33 chr13 62507871 62508739 -57775573 + L1_Mus3 LINE L1 5785 6637 -1 1 1061 4627 208 22 12 chr13 62508765 62509770 -57774542 - MurSatRep1 Unknown Unknown -1122 1015 1 1 1061 1704 238 62 90 chr13 62509894 62510385 -57773927 + RLTR20D LTR ERVK 1 464 -104 1 1061 495 0 0 0 chr13 62510385 62510440 -57773872 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1061 1704 238 62 90 chr13 62510440 62510515 -57773797 + RLTR20D LTR ERVK 465 551 -17 1 1061 1224 82 0 0 chr13 62510516 62510662 -57773650 + B1_Mus1 SINE Alu 2 147 -1 1 1061 255 122 0 0 chr13 62510663 62510712 -57773600 + (A)n Simple_repeat Simple_repeat 1 49 0 1 1061 342 352 8 23 chr13 62510799 62510927 -57773385 + B3 SINE B2 84 209 -7 1 1061 23 0 0 0 chr13 62511136 62511159 -57773153 + AT_rich Low_complexity Low_complexity 1 23 0 2 1061 724 353 61 43 chr13 62511443 62511819 -57772493 - MTD LTR MaLR -19 400 18 2 1061 237 286 135 96 chr13 62512626 62512804 -57771508 - B2_Mm2 SINE B2 -9 186 2 2 1061 189 0 0 0 chr13 62513328 62513349 -57770963 + (TTTTA)n Simple_repeat Simple_repeat 5 25 0 2 1061 1634 28 6 0 chr13 62513349 62513527 -57770785 - B2_Mm1t SINE B2 -14 179 1 2 1061 1096 143 17 6 chr13 62514210 62514386 -57769926 + B2_Mm1t SINE B2 2 179 -14 2 1061 32 57 0 0 chr13 62514499 62514552 -57769760 + AT_rich Low_complexity Low_complexity 1 53 0 2 1061 188 34 0 33 chr13 62515000 62515030 -57769282 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1061 336 152 0 0 chr13 62515050 62515109 -57769203 - B1_Mus2 SINE Alu 0 147 89 2 1061 1650 52 5 0 chr13 62515664 62515856 -57768456 + B2_Mm1t SINE B2 1 193 0 2 1061 1129 103 0 0 chr13 62516297 62516443 -57767869 - B1_Mus2 SINE Alu 0 147 2 3 1061 1202 83 0 0 chr13 62517024 62517169 -57767143 - B1_Mm SINE Alu -2 145 1 3 1061 1044 100 7 0 chr13 62517745 62517885 -57766427 + B1_Mus2 SINE Alu 1 141 -6 3 1061 391 229 7 13 chr13 62518652 62518807 -57765505 + CT-rich Low_complexity Low_complexity 3 156 0 3 1061 275 273 67 22 chr13 62518999 62519089 -57765223 - RLTR23 LTR ERV1 0 430 337 3 1061 594 262 89 59 chr13 62519615 62519975 -57764337 - MT2A LTR ERVL -26 575 92 3 1061 228 329 0 0 chr13 62520025 62520104 -57764208 + Lx5 LINE L1 6710 6788 -262 3 1061 284 281 0 33 chr13 62520110 62520202 -57764110 + RMER12 LTR ERVK 1 89 -1233 3 132 36216 35 1 0 chr13 62520203 62526690 -57757622 + L1Md_T LINE L1 1 5589 -297 3 1062 9591 5 0 0 chr13 62526690 62527686 -57756626 + L1Md_T LINE L1 5590 6585 0 3 1062 1159 190 198 7 chr13 62527705 62528010 -57756302 + RMER12 LTR ERVK 77 439 -883 3 1062 256 24 49 0 chr13 62528037 62528078 -57756234 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 1062 1163 88 0 0 chr13 62528080 62528217 -57756095 - B1_Mus2 SINE Alu -10 137 1 4 1062 521 164 51 25 chr13 62528219 62528350 -57755962 + RMER12 LTR ERVK 642 763 -559 3 1062 443 283 183 21 chr13 62528379 62528580 -57755732 + RMER12 LTR ERVK 958 1194 -128 4 1062 1380 81 43 0 chr13 62528580 62528766 -57755546 - B2_Mm2 SINE B2 0 195 2 4 1062 443 283 183 21 chr13 62528766 62528799 -57755513 + RMER12 LTR ERVK 1195 1230 -92 4 1062 584 224 6 77 chr13 62528990 62529159 -57755153 + RMER12 LTR ERVK 1166 1322 0 4 1062 195 69 0 0 chr13 62529389 62529418 -57754894 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1062 1156 102 0 0 chr13 62529442 62529589 -57754723 + B1_Mm SINE Alu 1 147 0 4 1062 183 80 0 0 chr13 62529590 62529615 -57754697 + (GAAAA)n Simple_repeat Simple_repeat 2 26 0 4 1062 2180 153 102 7 chr13 62529701 62530111 -57754201 - Lx LINE L1 -729 5925 5427 4 1062 6734 58 53 4 chr13 62530111 62530926 -57753386 + RLTR13A LTR ERVK 1 855 0 4 1062 2180 189 178 14 chr13 62530926 62531070 -57753242 - Lx LINE L1 -457 5426 5287 4 1062 5170 170 20 67 chr13 62531069 62531519 -57752793 + Lx2A1 LINE L1 5934 6359 -649 4 1062 1268 74 0 0 chr13 62531519 62531667 -57752645 + B1_Mus1 SINE Alu 1 148 0 5 1062 5170 170 20 67 chr13 62531667 62532339 -57751973 + Lx2A1 LINE L1 6360 7003 -5 4 1062 1357 112 11 0 chr13 62533149 62533336 -57750976 + B2_Mm1t SINE B2 1 189 -4 5 1062 1553 48 48 0 chr13 62533351 62533537 -57750775 + B2_Mm2 SINE B2 1 195 0 5 1062 1247 210 33 4 chr13 62533591 62533881 -57750431 - L1_Mur1 LINE L1 -701 5643 5317 5 1062 547 191 26 0 chr13 62533866 62533981 -57750331 - MusHAL1 LINE L1 -1188 1524 1407 5 1062 21 0 0 0 chr13 62534147 62534168 -57750144 + AT_rich Low_complexity Low_complexity 1 21 0 5 1062 792 184 137 19 chr13 62534189 62534394 -57749918 - RLTR25A LTR ERVK -264 839 611 5 1062 228 23 0 83 chr13 62534528 62534576 -57749736 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 5 1062 280 270 0 63 chr13 62535082 62535161 -57749151 - RSINE1 SINE B4 -84 81 8 5 1062 818 182 7 0 chr13 62535217 62535371 -57748941 + B2_Mm1t SINE B2 37 191 -2 5 1062 231 157 0 0 chr13 62535679 62535730 -57748582 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1062 524 61 86 17 chr13 62536207 62536323 -57747989 + CT-rich Low_complexity Low_complexity 2 125 0 6 1062 523 42 56 0 chr13 62536323 62536395 -57747917 + MTB LTR MaLR 325 400 0 6 1062 702 65 0 0 chr13 62536408 62536500 -57747812 + (TCCCC)n Simple_repeat Simple_repeat 5 96 0 6 1062 1126 122 0 0 chr13 62536514 62536661 -57747651 - B1_Mus2 SINE Alu 0 147 1 6 1062 2445 174 72 13 chr13 62536901 62537430 -57746882 - L1_Mur1 LINE L1 -1079 4807 4248 6 1062 359 274 34 42 chr13 62537430 62537548 -57746764 + ID_B1 SINE B4 102 218 -6 6 1062 703 91 0 0 chr13 62537453 62537552 -57746760 + B1_Mus2 SINE Alu 47 145 -2 6 1062 1254 36 0 0 chr13 62537798 62537936 -57746376 + B1_Mm SINE Alu 1 138 -9 6 1062 188 0 74 0 chr13 62537936 62537963 -57746349 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1062 5812 118 38 7 chr13 62538245 62539167 -57745145 + Lx3B LINE L1 348 1298 -5686 7 1062 8705 87 5 5 chr13 62539163 62540366 -57743946 + Lx3B LINE L1 4704 5904 -1069 7 1062 1245 149 0 25 chr13 62540366 62540523 -57743789 + B2_Mm2 SINE B2 1 157 -38 7 1062 249 33 0 0 chr13 62540523 62540553 -57743759 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 7 1062 1245 149 0 25 chr13 62540553 62540595 -57743717 + B2_Mm2 SINE B2 158 194 -1 7 1062 6648 158 25 103 chr13 62540595 62541699 -57742613 + Lx3B LINE L1 5905 6892 -81 7 1062 225 0 0 0 chr13 62541699 62541724 -57742588 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 7 1062 6648 158 25 103 chr13 62541724 62541797 -57742515 + Lx3B LINE L1 6893 6968 -5 7 1062 497 280 47 16 chr13 62542615 62542742 -57741570 + ETnERV2-int LTR ERVK 7070 7200 -206 7 1062 254 103 77 0 chr13 62543298 62543337 -57740975 + RNERVK23-int LTR ERVK 1602 1643 -4524 7 1062 309 352 0 15 chr13 62543427 62543557 -57740755 + RNERVK23-int LTR ERVK 1701 1828 -4339 7 1062 522 348 52 52 chr13 62543597 62544158 -57740154 + RNERVK23-int LTR ERVK 2295 2855 -5362 7 1062 4238 329 74 57 chr13 62544176 62545790 -57738522 + RNERVK23-int LTR ERVK 3172 4798 -3419 7 1062 1788 11 11 0 chr13 62545790 62545981 -57738331 - B2_Mm1a SINE B2 0 193 1 7 1062 4238 329 74 57 chr13 62545981 62548947 -57735365 + RNERVK23-int LTR ERVK 4799 7828 -389 7 1062 3399 167 18 11 chr13 62548977 62549541 -57734771 + ETnERV2-int LTR ERVK 6495 7062 -344 7 1062 221 290 101 101 chr13 62549756 62549894 -57734418 - B1_Mus2 SINE Alu -11 138 1 7 1062 258 324 81 0 chr13 62549821 62549895 -57734417 - ID_B1 SINE B4 -64 160 81 7 1062 209 270 48 0 chr13 62549974 62550037 -57734275 + MIRc SINE MIR 101 166 -102 8 1062 698 124 0 19 chr13 62551452 62551559 -57732753 - B1_Mus2 SINE Alu -41 106 2 8 1062 429 324 57 40 chr13 62551559 62551714 -57732598 + ORR1D2 LTR MaLR 169 329 -41 8 1062 1855 262 55 25 chr13 62551714 62551956 -57732356 + RLTR11A LTR ERVK 1 229 -299 8 1062 982 0 0 17 chr13 62551956 62552076 -57732236 + (GAGAA)n Simple_repeat Simple_repeat 3 120 0 8 1062 1855 262 55 25 chr13 62552076 62552346 -57731966 + RLTR11A LTR ERVK 230 527 -1 8 1062 429 324 57 40 chr13 62552346 62552387 -57731925 + ORR1D2 LTR MaLR 330 368 -2 8 1062 321 118 0 0 chr13 62552602 62552653 -57731659 + L1_Mus2 LINE L1 6516 6566 0 8 1062 1093 106 0 0 chr13 62552672 62552813 -57731499 + B1_Mus1 SINE Alu 2 142 -6 8 1062 5710 10 0 0 chr13 62552904 62553501 -57730811 - L1Md_T LINE L1 0 6582 5986 8 1062 2109 4 0 0 chr13 62553501 62553735 -57730577 + L1Md_T LINE L1 5837 6070 -512 8 1062 21 0 0 0 chr13 62553974 62553995 -57730317 + AT_rich Low_complexity Low_complexity 1 21 0 8 1062 249 351 7 44 chr13 62553995 62554013 -57730299 - B3 SINE B2 -1 215 198 8 1062 1222 42 14 0 chr13 62554013 62554155 -57730157 - B1_Mm SINE Alu -3 144 1 9 1062 249 351 7 44 chr13 62554155 62554273 -57730039 - B3 SINE B2 -19 197 84 8 1062 1614 52 0 10 chr13 62554364 62554557 -57729755 - B2_Mm1t SINE B2 -2 191 1 9 1062 741 61 0 0 chr13 62554572 62554671 -57729641 - B1_Mm SINE Alu -48 99 1 9 1062 222 62 0 0 chr13 62554857 62554889 -57729423 + (TC)n Simple_repeat Simple_repeat 1 32 0 9 1062 560 264 9 1 chr13 62555077 62555808 -57728504 - MMSAT4 Satellite Satellite -4 736 1 9 1062 567 257 12 12 chr13 62555820 62556151 -57728161 - MMSAT4 Satellite Satellite 0 570 58 9 1062 485 323 20 15 chr13 62556151 62556355 -57727957 - MurSatRep1 Unknown Unknown -88 2049 1845 9 1062 305 326 29 54 chr13 62556325 62556565 -57727747 - MurSatRep1 Unknown Unknown -94 2043 1810 9 1062 567 257 12 12 chr13 62556355 62556390 -57727922 - MMSAT4 Satellite Satellite 0 57 1 9 1062 180 77 0 0 chr13 62556609 62556635 -57727677 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 1062 857 131 89 32 chr13 62556635 62556793 -57727519 - B2_Mm1a SINE B2 -26 167 1 9 1062 6474 226 39 34 chr13 62556807 62557699 -57726613 - MurSatRep1 Unknown Unknown -36 2101 1209 9 1062 1196 68 0 20 chr13 62557699 62557848 -57726464 - B1_Mm SINE Alu 0 147 2 1 1062 6474 226 39 34 chr13 62557848 62558607 -57725705 - MurSatRep1 Unknown Unknown -929 1208 425 9 1062 994 129 121 17 chr13 62558607 62558781 -57725531 - B2_Mm2 SINE B2 -2 193 2 1 1062 6474 226 39 34 chr13 62558781 62558914 -57725398 - MurSatRep1 Unknown Unknown -1713 424 307 9 1062 425 316 22 15 chr13 62558936 62559071 -57725241 + B1_Mur2 SINE Alu 2 137 -12 1 1062 245 257 0 26 chr13 62559072 62559148 -57725164 - MurSatRep1 Unknown Unknown -1991 146 73 9 1062 300 68 49 33 chr13 62559148 62559209 -57725103 - B2_Mm2 SINE B2 -14 181 120 1 1062 833 157 50 0 chr13 62559282 62559422 -57724890 - B1_Mus1 SINE Alu 0 148 2 1 1062 513 355 12 0 chr13 62559468 62559637 -57724675 + B3 SINE B2 27 197 -19 1 1062 249 308 97 8 chr13 62559877 62560011 -57724301 + B1_Mus2 SINE Alu 2 147 0 1 1062 417 295 64 6 chr13 62560369 62560526 -57723786 - ORR1D-int LTR MaLR -7 1363 1198 1 1062 2921 88 5 0 chr13 62561423 62561800 -57722512 - L1Md_F2 LINE L1 -2 6580 6202 1 1062 538 203 23 0 chr13 62562497 62562724 -57721588 + CT-rich Low_complexity Low_complexity 1 232 0 1 1062 230 268 91 23 chr13 62562916 62563004 -57721308 - RLTR23 LTR ERV1 0 430 337 1 1062 446 229 108 67 chr13 62563533 62563855 -57720457 - MT2A LTR ERVL 0 584 84 1 1062 549 115 0 0 chr13 62565484 62565571 -57718741 + (TCCA)n Simple_repeat Simple_repeat 1 87 0 1 1062 1431 96 11 0 chr13 62565989 62566177 -57718135 + B2_Mm1t SINE B2 2 191 -2 1 1062 470 125 0 40 chr13 62566350 62566450 -57717862 + Lx4A LINE L1 6961 7056 -2 1 1062 1140 88 0 20 chr13 62567025 62567175 -57717137 + B1_Mus1 SINE Alu 2 148 0 1 1062 1163 130 5 0 chr13 62567406 62567590 -57716722 + RLTR22_Mus LTR ERVK 1376 1560 -248 1 1062 923 227 60 24 chr13 62567748 62567996 -57716316 + RLTR22_Mur LTR ERVK 1592 1848 0 1 1062 477 288 64 91 chr13 62568784 62569113 -57715199 - MT2B LTR ERVL 0 601 282 1 1062 253 282 47 0 chr13 62569138 62569223 -57715089 - MT2B LTR ERVL -404 129 41 1 1062 302 101 342 52 chr13 62569303 62569417 -57714895 - B2_Mm2 SINE B2 -2 193 47 1 1062 1083 109 82 29 chr13 62569465 62569635 -57714677 - B2_Mm1a SINE B2 -14 179 1 1 1062 295 291 91 0 chr13 62569790 62569900 -57714412 + ID_B1 SINE B4 95 214 -10 1 1062 1369 82 50 0 chr13 62570617 62570799 -57713513 + B2_Mm1t SINE B2 1 191 -2 1 1062 396 321 35 47 chr13 62571445 62571615 -57712697 - B3 SINE B2 -25 191 24 1 1062 21 57 0 0 chr13 62571623 62571658 -57712654 + AT_rich Low_complexity Low_complexity 1 35 0 1 1062 1803 21 0 0 chr13 62571717 62571909 -57712403 - B2_Mm1a SINE B2 0 193 2 1 1062 347 281 54 14 chr13 62572742 62572890 -57711422 - Lx9 LINE L1 -145 7499 7346 1 1062 425 305 35 60 chr13 62572927 62573126 -57711186 + RLTR18 LTR ERVK 32 225 -391 1 1062 779 317 51 7 chr13 62573261 62573553 -57710759 - MTE-int LTR MaLR -220 1360 1056 1 1062 424 270 81 0 chr13 62573605 62573716 -57710596 + B3 SINE B2 2 121 -95 1 1062 2070 150 164 21 chr13 62573922 62574344 -57709968 - LTRIS4 LTR ERV1 0 507 26 1 1062 3346 16 0 37 chr13 62574349 62574730 -57709582 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1062 56826 21 15 3 chr13 62574730 62581128 -57703184 - IAPEz-int LTR ERVK 0 6481 8 1 1062 3346 16 0 37 chr13 62581128 62581509 -57702803 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1062 198 0 0 0 chr13 62581558 62581580 -57702732 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1062 1690 42 0 5 chr13 62582479 62582672 -57701640 + B2_Mm1t SINE B2 2 193 0 1 1062 5275 116 9 22 chr13 62582683 62583838 -57700474 + L1Md_A LINE L1 415 1552 -4331 1 1062 2297 45 0 0 chr13 62583858 62584122 -57700190 + L1Md_A LINE L1 6317 6580 -2 1 1062 11692 34 0 0 chr13 62584122 62585489 -57698823 + L1Md_F2 LINE L1 4219 5585 -298 1 1062 8600 44 3 9 chr13 62585490 62586492 -57697820 + L1Md_F2 LINE L1 5587 6582 0 1 1062 830 236 45 10 chr13 62587752 62587953 -57696359 + RLTR11A LTR ERVK 318 525 -3 1 1062 264 354 46 46 chr13 62588619 62588921 -57695391 - MurSatRep1 Unknown Unknown -89 2048 1747 1 1062 436 287 11 11 chr13 62588712 62589006 -57695306 - MMSAT4 Satellite Satellite -5 294 1 1 1062 376 335 19 15 chr13 62588954 62589160 -57695152 - MurSatRep1 Unknown Unknown -88 2049 1843 1 1062 353 299 21 21 chr13 62589043 62589183 -57695129 - MMSAT4 Satellite Satellite 0 168 29 1 1062 4713 218 21 13 chr13 62589379 62590469 -57693843 - MurSatRep1 Unknown Unknown -11 2126 1028 1 1062 14360 132 9 12 chr13 62590463 62591302 -57693010 + L1_Mus3 LINE L1 3605 4437 -1446 1 1062 1434 109 5 0 chr13 62591302 62591494 -57692818 + B2_Mm1t SINE B2 1 193 0 1 1062 14360 111 10 10 chr13 62591494 62593695 -57690617 + L1_Mus3 LINE L1 4438 6637 -1 1 1062 4397 192 34 55 chr13 62593717 62593965 -57690347 - MurSatRep1 Unknown Unknown -1122 1015 765 1 1062 1354 20 0 0 chr13 62593965 62594112 -57690200 + B1_Mus2 SINE Alu 1 147 0 1 1062 4397 192 34 55 chr13 62594112 62594900 -57689412 - MurSatRep1 Unknown Unknown -1373 764 1 1 1062 1665 240 62 90 chr13 62595024 62595515 -57688797 + RLTR20D LTR ERVK 1 464 -104 1 1062 315 0 0 0 chr13 62595515 62595550 -57688762 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1062 1665 240 62 90 chr13 62595550 62595625 -57688687 + RLTR20D LTR ERVK 465 551 -17 1 1062 1178 103 0 0 chr13 62595626 62595772 -57688540 + B1_Mus1 SINE Alu 2 147 -1 1 1062 370 336 8 23 chr13 62595890 62596018 -57688294 + B3 SINE B2 84 209 -7 1 1062 23 0 0 0 chr13 62596227 62596250 -57688062 + AT_rich Low_complexity Low_complexity 1 23 0 1 1062 755 354 56 37 chr13 62596534 62596910 -57687402 - MTD LTR MaLR -19 400 18 1 1062 235 265 127 127 chr13 62597723 62597896 -57686416 - B2_Mm2 SINE B2 -21 174 2 1 1062 24 32 0 0 chr13 62597936 62597967 -57686345 + AT_rich Low_complexity Low_complexity 1 31 0 1 1062 333 0 0 0 chr13 62598428 62598465 -57685847 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 1 1062 1659 22 6 0 chr13 62598467 62598645 -57685667 - B2_Mm1t SINE B2 -14 179 1 1 1062 1073 143 17 6 chr13 62599324 62599500 -57684812 + B2_Mm1t SINE B2 2 179 -14 1 1062 28 61 0 0 chr13 62599613 62599662 -57684650 + AT_rich Low_complexity Low_complexity 1 49 0 1 1062 22 35 0 0 chr13 62600113 62600142 -57684170 + AT_rich Low_complexity Low_complexity 1 29 0 1 1062 327 152 0 0 chr13 62600155 62600214 -57684098 - B1_Mus2 SINE Alu 0 147 89 1 1062 1587 58 11 0 chr13 62600770 62600961 -57683351 + B2_Mm1t SINE B2 1 193 0 1 1062 1140 96 0 0 chr13 62601403 62601549 -57682763 - B1_Mus2 SINE Alu 0 147 2 1 1062 228 23 0 83 chr13 62602795 62602843 -57681469 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1 1062 280 270 0 63 chr13 62603349 62603428 -57680884 - RSINE1 SINE B4 -84 81 8 1 1062 856 157 7 7 chr13 62603484 62603638 -57680674 + B2_Mm1t SINE B2 37 190 -3 1 1062 224 167 18 18 chr13 62603948 62604003 -57680309 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1062 293 69 65 54 chr13 62604478 62604570 -57679742 + CT-rich Low_complexity Low_complexity 2 94 0 1 1062 523 42 56 0 chr13 62604570 62604642 -57679670 + MTB LTR MaLR 325 400 0 1 1062 732 115 0 0 chr13 62604655 62604768 -57679544 + (TTCCC)n Simple_repeat Simple_repeat 4 116 0 1 1062 306 0 0 0 chr13 62604776 62604810 -57679502 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1062 1129 97 7 0 chr13 62604810 62604948 -57679364 - B1_Mus2 SINE Alu -7 140 2 1 1062 2515 165 74 13 chr13 62605188 62605716 -57678596 - L1_Mur1 LINE L1 -1079 4807 4248 1 1062 339 257 42 50 chr13 62605716 62605739 -57678573 + ID_B1 SINE B4 102 211 -13 1 1062 665 94 0 0 chr13 62605739 62605827 -57678485 + B1_Mus2 SINE Alu 47 134 -13 1 1062 297 68 0 0 chr13 62605827 62605871 -57678441 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 1 1062 1405 176 58 4 chr13 62606365 62606639 -57677673 + L1_Mur1 LINE L1 346 634 -6348 1 1062 9501 74 11 7 chr13 62606650 62607274 -57677038 + Lx3_Mus LINE L1 5313 5906 -1103 1 1062 1193 150 0 35 chr13 62607274 62607429 -57676883 + B2_Mm2 SINE B2 3 157 -38 1 1062 306 0 0 0 chr13 62607429 62607463 -57676849 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 1 1062 1193 150 0 35 chr13 62607463 62607507 -57676805 + B2_Mm2 SINE B2 158 194 -1 1 1062 9501 96 15 45 chr13 62607507 62608620 -57675692 + Lx3_Mus LINE L1 5907 7008 -1 1 1062 205 170 0 60 chr13 62609161 62609211 -57675101 + CT-rich Low_complexity Low_complexity 2 48 0 1 1062 221 240 10 0 chr13 62609224 62609320 -57674992 + CT-rich Low_complexity Low_complexity 2 98 0 1 1062 1252 48 7 0 chr13 62609483 62609629 -57674683 + B1_Mus2 SINE Alu 1 147 0 1 1062 24 0 0 0 chr13 62609629 62609653 -57674659 + AT_rich Low_complexity Low_complexity 1 24 0 1 1062 319 308 25 25 chr13 62609717 62609837 -57674475 - RLTR23 LTR ERV1 0 430 311 1 1062 1647 42 0 10 chr13 62610171 62610363 -57673949 + B2_Mm1a SINE B2 4 193 0 1 1062 1309 103 17 6 chr13 62610682 62610858 -57673454 + B2_Mm2 SINE B2 2 179 -16 1 1062 334 162 0 0 chr13 62610906 62610974 -57673338 + B2_Mm1t SINE B2 124 191 -2 1 1062 471 290 108 59 chr13 62610972 62611262 -57673050 - MT2A LTR ERVL -70 531 86 1 1062 263 304 136 0 chr13 62611432 62611557 -57672755 - B3 SINE B2 0 216 75 1 1062 21 57 0 0 chr13 62611610 62611645 -57672667 + AT_rich Low_complexity Low_complexity 1 35 0 1 1062 268 269 67 30 chr13 62612459 62612593 -57671719 - Lx9 LINE L1 -172 7472 7334 1 1062 396 245 17 165 chr13 62612657 62612833 -57671479 + RLTR18 LTR ERVK 65 214 -402 1 1062 583 345 34 0 chr13 62612994 62613258 -57671054 - MTE-int LTR MaLR -240 1340 1068 1 1062 947 104 22 0 chr13 62613319 62613453 -57670859 + B1_Mus1 SINE Alu 1 137 -11 1 1062 234 0 0 0 chr13 62613453 62613479 -57670833 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1062 1534 48 27 0 chr13 62614402 62614590 -57669722 - B2_Mm1a SINE B2 0 193 1 1 1062 1643 42 0 0 chr13 62614727 62614919 -57669393 + B2_Mm1a SINE B2 1 192 -1 1 1062 199 257 95 0 chr13 62615262 62615336 -57668976 + MIRb SINE MIR 104 184 -84 1 1062 1140 68 7 0 chr13 62615785 62615931 -57668381 + B1_Mm SINE Alu 1 147 0 1 1062 348 77 0 0 chr13 62615931 62615983 -57668329 + (A)n Simple_repeat Simple_repeat 1 52 0 1 1062 396 0 0 0 chr13 62616797 62616841 -57667471 + (TC)n Simple_repeat Simple_repeat 1 44 0 1 1062 1059 105 0 0 chr13 62616842 62616985 -57667327 - B1_Mus2 SINE Alu -4 143 1 2 1062 411 290 63 29 chr13 62617008 62617140 -57667172 + ORR1D2 LTR MaLR 190 329 -41 2 1062 1528 264 61 27 chr13 62617140 62617651 -57666661 + RLTR11A LTR ERVK 1 528 0 2 1062 411 290 63 29 chr13 62617651 62617692 -57666620 + ORR1D2 LTR MaLR 330 369 -1 2 1062 183 114 0 0 chr13 62618383 62618418 -57665894 + (TC)n Simple_repeat Simple_repeat 2 36 0 2 1062 589 282 2 2 chr13 62618690 62619927 -57664385 - MMSAT4 Satellite Satellite -5 1237 1 2 1062 253 355 25 50 chr13 62619862 62620102 -57664210 - MurSatRep1 Unknown Unknown -94 2043 1810 2 1062 1022 156 5 25 chr13 62620145 62620342 -57663970 - B2_Mm1a SINE B2 0 193 1 2 1062 3489 247 31 29 chr13 62620343 62621409 -57662903 - MurSatRep1 Unknown Unknown -25 2112 1045 2 1062 384 37 0 0 chr13 62621428 62621482 -57662830 - B1_Mm SINE Alu 0 147 94 2 1062 4407 210 28 46 chr13 62621482 62622094 -57662218 - MurSatRep1 Unknown Unknown -1082 1055 425 2 1062 1032 159 26 5 chr13 62622094 62622284 -57662028 - B2_Mm2 SINE B2 0 195 2 2 1062 4407 210 28 46 chr13 62622284 62622488 -57661824 - MurSatRep1 Unknown Unknown -1713 424 251 2 1062 1018 111 0 0 chr13 62622488 62622623 -57661689 + B1_Mus2 SINE Alu 1 135 -12 2 1062 390 21 0 0 chr13 62622626 62622673 -57661639 + (CAAAC)n Simple_repeat Simple_repeat 2 48 0 2 1062 4407 210 28 46 chr13 62622673 62622836 -57661476 - MurSatRep1 Unknown Unknown -1887 250 86 2 1062 1061 117 59 32 chr13 62622836 62623022 -57661290 - B2_Mm2 SINE B2 -3 192 2 2 1062 4407 210 28 46 chr13 62623022 62623110 -57661202 - MurSatRep1 Unknown Unknown -2052 85 1 2 1062 1037 202 43 9 chr13 62623171 62623381 -57660931 - L1VL2 LINE L1 -6070 265 49 2 1062 985 167 0 6 chr13 62623362 62623531 -57660781 + L1_Mur1 LINE L1 4926 5093 -793 2 1062 3024 55 42 0 chr13 62623531 62623911 -57660401 - MTA_Mm LTR MaLR 0 396 1 2 1062 7993 46 16 2 chr13 62623921 62624888 -57659424 + L1Md_F2 LINE L1 5594 6574 -8 2 1062 634 129 0 0 chr13 62624929 62625030 -57659282 - B1_Mus2 SINE Alu 0 147 47 2 1062 189 0 0 0 chr13 62626040 62626061 -57658251 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2 1062 926 149 0 0 chr13 62626062 62626203 -57658109 - B1_Mus1 SINE Alu -7 141 1 2 1062 519 95 0 0 chr13 62626384 62626458 -57657854 + (TCCA)n Simple_repeat Simple_repeat 1 74 0 2 1062 186 43 0 0 chr13 62626516 62626539 -57657773 + (TCTCC)n Simple_repeat Simple_repeat 2 24 0 2 1062 597 266 5 53 chr13 62626986 62627173 -57657139 + RMER12 LTR ERVK 1145 1322 0 2 1062 226 268 186 47 chr13 62627213 62627342 -57656970 + Lx4B LINE L1 6895 7041 -17 2 1062 322 161 0 0 chr13 62628558 62628614 -57655698 + MTB LTR MaLR 345 400 0 2 1062 2096 120 19 0 chr13 62630669 62630986 -57653326 - L1_Mus3 LINE L1 -3 6635 6313 2 1062 252 214 56 14 chr13 62633106 62633177 -57651135 - ORR1D1 LTR MaLR -6 368 295 2 1062 454 173 0 19 chr13 62633734 62633840 -57650472 + Lx4A LINE L1 6953 7056 -2 2 1062 204 40 0 0 chr13 62634034 62634059 -57650253 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1062 1162 138 5 0 chr13 62634584 62634779 -57649533 + RLTR22_Mus LTR ERVK 1365 1560 -248 2 1062 729 256 60 24 chr13 62634937 62635185 -57649127 + RLTR22_Mur LTR ERVK 1592 1848 0 2 1062 185 65 0 31 chr13 62635653 62635685 -57648627 + (TCC)n Simple_repeat Simple_repeat 1 31 0 2 1062 414 298 46 73 chr13 62635971 62636300 -57648012 - MT2B LTR ERVL 0 601 282 2 1062 281 247 47 12 chr13 62636326 62636412 -57647900 - MT2B LTR ERVL -404 129 41 2 1062 972 142 0 0 chr13 62636497 62636645 -57647667 - B1_Mus1 SINE Alu 0 148 1 2 1062 1042 90 14 14 chr13 62636876 62637022 -57647290 + B1_Mus2 SINE Alu 2 147 0 2 1062 2992 37 184 2 chr13 62637334 62637736 -57646576 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1062 298 212 73 29 chr13 62638105 62638173 -57646139 - B3A SINE B2 -34 164 94 2 1062 5902 123 97 15 chr13 62640912 62642066 -57642246 + L1_Mur1 LINE L1 205 1454 -4432 2 1062 875 94 0 0 chr13 62642066 62642194 -57642118 + B1_Mus1 SINE Alu 1 128 -20 2 1062 3971 123 106 10 chr13 62642194 62643022 -57641290 + L1_Mur1 LINE L1 1700 2802 -3045 2 1062 1025 146 55 5 chr13 62643022 62643222 -57641090 + Lx3A LINE L1 6772 6981 0 2 1062 661 309 30 12 chr13 62643222 62643258 -57641054 + L1_Mur1 LINE L1 2803 2839 -3008 2 1062 501 172 0 0 chr13 62644464 62644557 -57639755 + T-rich Low_complexity Low_complexity 1 93 0 2 1062 409 211 17 28 chr13 62645704 62645884 -57638428 + CT-rich Low_complexity Low_complexity 3 180 0 2 1062 480 256 55 125 chr13 62646704 62646865 -57637447 - MT2B LTR ERVL 0 601 444 2 1062 1306 51 97 0 chr13 62646865 62646883 -57637429 - B2_Mm1a SINE B2 0 193 176 2 1062 288 0 0 0 chr13 62646883 62646915 -57637397 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2 1062 1306 51 97 0 chr13 62646915 62647071 -57637241 - B2_Mm1a SINE B2 -18 175 3 2 1062 480 256 55 125 chr13 62647071 62647253 -57637059 - MT2B LTR ERVL -158 443 283 2 1062 265 257 68 0 chr13 62647613 62647687 -57636625 + ID_B1 SINE B4 137 215 -9 2 1062 374 121 15 0 chr13 62648992 62649058 -57635254 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 2 1062 1338 106 11 0 chr13 62649469 62649658 -57634654 + B2_Mm1t SINE B2 2 192 -1 2 1062 2425 103 55 25 chr13 62649906 62650305 -57634007 + IAPLTR2a LTR ERVK 1 411 0 2 1062 4245 75 17 140 chr13 62650306 62651051 -57633261 + IAPEz-int LTR ERVK 9 662 -5819 2 1062 2095 67 41 0 chr13 62651051 62651318 -57632994 + IAPEz-int LTR ERVK 1359 1636 -4845 2 1062 5764 61 13 20 chr13 62651317 62652068 -57632244 + IAPEz-int LTR ERVK 5736 6481 0 2 132 2412 105 55 25 chr13 62652068 62652467 -57631845 + IAPLTR2a LTR ERVK 1 411 0 2 1063 303 148 0 0 chr13 62652470 62652524 -57631788 + Lx4A LINE L1 7005 7058 0 2 1063 324 0 0 0 chr13 62652718 62652754 -57631558 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1063 970 129 0 0 chr13 62653128 62653275 -57631037 + B1_Mus1 SINE Alu 2 148 0 2 1063 207 157 0 0 chr13 62653275 62653326 -57630986 + A-rich Low_complexity Low_complexity 1 51 0 2 1063 4180 67 40 9 chr13 62653407 62653950 -57630362 - LTRIS2 LTR ERV1 0 564 5 2 1063 976 203 39 22 chr13 62653953 62654185 -57630127 - RLTR1B-int LTR ERV1 -42 5021 4786 2 1063 1101 215 64 23 chr13 62654270 62654685 -57629627 - RLTR1B-int LTR ERV1 -486 2813 2669 2 1063 8177 155 80 44 chr13 62654677 62656929 -57627383 - RLTR1B-int LTR ERV1 -746 2553 760 2 1063 4352 153 51 15 chr13 62656920 62657649 -57626663 - RMER16-int LTR ERVK -3962 1444 690 2 1063 881 141 74 63 chr13 62657673 62657862 -57626450 - RMER16-int LTR ERVK -5075 331 141 2 1063 745 72 0 2 chr13 62658208 62658317 -57625995 - RLTR1B-int LTR ERV1 -3006 293 139 2 1063 282 207 25 75 chr13 62658408 62658528 -57625784 - RLTR1B-int LTR ERV1 -3584 114 1 2 1063 4123 71 40 9 chr13 62658528 62659071 -57625241 - LTRIS2 LTR ERV1 0 564 5 2 1063 1148 149 5 0 chr13 62659176 62659371 -57624941 + RLTR22_Mur LTR ERVK 1413 1608 -240 2 1063 880 207 69 24 chr13 62659529 62659776 -57624536 + RLTR22_Mur LTR ERVK 1591 1848 0 2 1063 393 256 67 146 chr13 62660563 62660892 -57623420 - MT2B2 LTR ERVL 0 584 282 2 1063 269 253 48 12 chr13 62660917 62661001 -57623311 - MT2B2 LTR ERVL -404 129 43 2 1063 244 170 18 54 chr13 62661141 62661197 -57623115 - B2_Mm2 SINE B2 -94 101 48 2 1063 1057 103 84 12 chr13 62661242 62661409 -57622903 - B2_Mm1a SINE B2 -14 179 1 2 1063 261 262 100 0 chr13 62661595 62661675 -57622637 + ID_B1 SINE B4 127 214 -10 2 1063 1315 72 67 0 chr13 62662392 62662572 -57621740 + B2_Mm1t SINE B2 1 192 -1 2 1063 292 318 34 50 chr13 62663212 62663391 -57620921 - B3A SINE B2 -1 197 22 2 1063 22 56 0 0 chr13 62663397 62663433 -57620879 + AT_rich Low_complexity Low_complexity 1 36 0 2 1063 1551 243 58 88 chr13 62663725 62664216 -57620096 + RLTR20D LTR ERVK 1 473 -95 2 1063 183 42 0 0 chr13 62664216 62664240 -57620072 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1063 1551 243 58 88 chr13 62664240 62664316 -57619996 + RLTR20D LTR ERVK 474 550 -18 2 1063 1047 58 0 0 chr13 62664325 62664463 -57619849 + B1_Mm SINE Alu 9 146 -1 2 1063 902 58 0 8 chr13 62664479 62664601 -57619711 + (GAA)n Simple_repeat Simple_repeat 2 122 0 2 1063 287 352 8 23 chr13 62664686 62664814 -57619498 + B3 SINE B2 84 209 -7 2 1063 22 0 0 0 chr13 62665023 62665045 -57619267 + AT_rich Low_complexity Low_complexity 1 22 0 2 1063 1173 48 7 0 chr13 62665062 62665207 -57619105 + B1_Mus2 SINE Alu 2 147 0 2 1063 282 56 0 0 chr13 62665207 62665243 -57619069 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1063 656 345 61 43 chr13 62665515 62665891 -57618421 - MTD LTR MaLR -19 400 18 2 1063 1141 83 0 0 chr13 62666697 62666842 -57617470 - B1_Mm SINE Alu -2 145 1 2 1063 25 0 0 0 chr13 62667080 62667105 -57617207 + AT_rich Low_complexity Low_complexity 1 25 0 2 1063 1084 137 17 6 chr13 62668250 62668426 -57615886 + B2_Mm1t SINE B2 2 179 -14 2 1063 29 0 0 0 chr13 62668547 62668576 -57615736 + AT_rich Low_complexity Low_complexity 1 29 0 2 1063 1203 101 12 0 chr13 62668959 62669128 -57615184 + B2_Mm1t SINE B2 1 171 -22 2 1063 407 91 0 0 chr13 62669163 62669218 -57615094 + B2_Mm2 SINE B2 47 101 -94 2 1063 24 32 0 0 chr13 62669242 62669273 -57615039 + AT_rich Low_complexity Low_complexity 1 31 0 2 1063 396 0 0 0 chr13 62669369 62669413 -57614899 + (TA)n Simple_repeat Simple_repeat 2 45 0 2 1063 255 130 0 0 chr13 62670360 62670414 -57613898 + (T)n Simple_repeat Simple_repeat 1 54 0 2 1063 1227 68 0 0 chr13 62670415 62670561 -57613751 - B1_Mus2 SINE Alu 0 147 2 2 1063 1174 75 0 33 chr13 62671115 62671129 -57613183 - B1_Mm SINE Alu 0 147 138 2 1063 324 0 0 0 chr13 62671129 62671165 -57613147 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2 1063 1174 75 0 33 chr13 62671165 62671302 -57613010 - B1_Mm SINE Alu -10 137 1 2 1063 1035 100 7 0 chr13 62671868 62672008 -57612304 + B1_Mus2 SINE Alu 1 141 -6 2 1063 437 169 23 15 chr13 62672801 62672933 -57611379 + CT-rich Low_complexity Low_complexity 3 135 0 2 1063 289 272 20 61 chr13 62673124 62673222 -57611090 - RLTR23 LTR ERV1 0 430 337 2 1063 595 237 98 67 chr13 62673741 62674073 -57610239 - MT2A LTR ERVL -26 575 123 2 1063 244 333 0 0 chr13 62674135 62674222 -57610090 + Lx5 LINE L1 6702 6788 -262 2 1063 1575 178 16 16 chr13 62674228 62674542 -57609770 + RMER12 LTR ERVK 1 314 -1008 2 1063 235 241 0 0 chr13 62674556 62674614 -57609698 + RMER12 LTR ERVK 382 439 -883 2 1063 1173 82 0 45 chr13 62674640 62674794 -57609518 - B1_Mus2 SINE Alu 0 147 1 2 1063 541 147 50 25 chr13 62674796 62674915 -57609397 + RMER12 LTR ERVK 642 763 -559 2 1063 5957 160 20 40 chr13 62674956 62676048 -57608264 + Lx2A1 LINE L1 5934 7003 -5 2 1063 210 139 0 0 chr13 62676384 62676420 -57607892 + (C)n Simple_repeat Simple_repeat 1 36 0 2 1063 1368 65 53 0 chr13 62676888 62677058 -57607254 + B2_Mm2 SINE B2 1 179 -16 2 1063 450 0 0 0 chr13 62677058 62677108 -57607204 + (GAAAA)n Simple_repeat Simple_repeat 5 54 0 2 1063 1179 197 73 4 chr13 62677160 62677420 -57606892 - L1_Mur2 LINE L1 -292 5585 5308 2 1063 496 226 26 0 chr13 62677405 62677520 -57606792 - MusHAL1 LINE L1 -1188 1524 1407 2 1063 3055 218 80 7 chr13 62677718 62678440 -57605872 - RLTR25B LTR ERVK -253 775 1 2 1063 241 202 88 78 chr13 62678451 62678553 -57605759 - Lx9 LINE L1 -206 7438 7336 3 1063 228 23 0 83 chr13 62679931 62679979 -57604333 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1063 999 147 0 0 chr13 62680619 62680776 -57603536 + B2_Mm2 SINE B2 35 191 -4 3 1063 210 176 0 0 chr13 62681084 62681135 -57603177 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1063 274 263 3 15 chr13 62682455 62682530 -57601782 + ORR1D2 LTR MaLR 55 130 -244 3 1063 615 159 0 0 chr13 62682535 62682648 -57601664 + GA-rich Low_complexity Low_complexity 1 113 0 3 1063 270 149 36 146 chr13 62682648 62682758 -57601554 + L1_Mur2 LINE L1 1497 1594 -4286 3 1063 607 120 111 0 chr13 62682758 62682866 -57601446 + B1_Mus2 SINE Alu 28 147 0 3 1063 496 159 18 18 chr13 62682884 62682895 -57601417 + L1_Mur2 LINE L1 1578 1589 -4288 3 1063 1261 62 6 11 chr13 62682895 62683076 -57601236 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1063 496 159 18 18 chr13 62683076 62683173 -57601139 + L1_Mur2 LINE L1 1590 1686 -4191 3 1063 493 108 0 39 chr13 62683175 62683252 -57601060 - B1_Mus1 SINE Alu -74 74 1 3 1063 424 153 0 53 chr13 62683184 62683260 -57601052 - B4 SINE B4 -143 149 78 3 1063 1601 77 34 0 chr13 62683265 62683472 -57600840 - L1_Mus2 LINE L1 0 6566 6353 3 1063 1652 156 173 17 chr13 62683472 62683825 -57600487 - MurSatRep1 Unknown Unknown -1437 700 293 3 1063 401 271 30 23 chr13 62683836 62683968 -57600344 + B1_Mur2 SINE Alu 1 133 -16 3 1063 522 246 15 0 chr13 62683970 62684104 -57600208 - MurSatRep1 Unknown Unknown -1988 149 14 3 1063 15587 71 1 4 chr13 62684118 62685536 -57598776 - L1_Mus1 LINE L1 -2 6565 5175 3 1063 1101 123 0 0 chr13 62685536 62685682 -57598630 - B1_Mus2 SINE Alu 0 147 2 3 1063 15587 109 4 14 chr13 62685682 62687248 -57597064 - L1_Mus1 LINE L1 -709 5174 3604 3 1063 483 167 52 10 chr13 62687352 62687449 -57596863 + RLTR20D LTR ERVK 1 101 -467 3 1063 1151 90 7 0 chr13 62687452 62687597 -57596715 + B1_Mus1 SINE Alu 3 148 0 3 1063 1088 243 30 47 chr13 62687615 62687912 -57596400 + RLTR20D LTR ERVK 290 568 0 3 1063 211 370 43 0 chr13 62687914 62688006 -57596306 + B3A SINE B2 27 122 -76 3 1063 279 278 108 43 chr13 62688389 62688528 -57595784 + B1_Mur3 SINE Alu 2 149 0 3 1063 180 0 0 0 chr13 62688642 62688662 -57595650 + (GGAA)n Simple_repeat Simple_repeat 4 23 0 3 1063 1113 356 52 45 chr13 62688879 62689056 -57595256 - ORR1D-int LTR MaLR -8 1362 1183 3 1063 3715 65 45 4 chr13 62689056 62689519 -57594793 - RLTR45 LTR ERVK 0 482 1 3 1063 1113 356 52 45 chr13 62689519 62689666 -57594646 - ORR1D-int LTR MaLR -188 1182 1026 3 1063 1112 106 7 0 chr13 62689666 62689808 -57594504 - B1_Mus2 SINE Alu -3 144 2 3 1063 1113 356 52 45 chr13 62689808 62690276 -57594036 - ORR1D-int LTR MaLR -345 1025 564 3 1063 473 151 27 0 chr13 62690304 62690377 -57593935 - B1_Mus1 SINE Alu -71 77 3 3 1063 1530 68 0 35 chr13 62690387 62690586 -57593726 - B2_Mm1t SINE B2 0 193 2 3 1063 2620 176 47 19 chr13 62690647 62690691 -57593621 - L1_Mur1 LINE L1 -1087 4799 4764 3 1063 3551 80 45 2 chr13 62690691 62691153 -57593159 - RLTR45 LTR ERVK 0 482 1 3 1063 2620 176 47 19 chr13 62691153 62691645 -57592667 - L1_Mur1 LINE L1 -1123 4763 4248 3 1063 339 257 42 50 chr13 62691645 62691668 -57592644 + ID_B1 SINE B4 102 211 -13 3 1063 665 94 0 0 chr13 62691668 62691756 -57592556 + B1_Mus2 SINE Alu 47 134 -13 3 1063 297 68 0 0 chr13 62691756 62691800 -57592512 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 3 1063 1253 36 0 0 chr13 62692025 62692163 -57592149 + B1_Mm SINE Alu 1 138 -9 3 1063 238 0 53 26 chr13 62692163 62692201 -57592111 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1063 5696 120 39 7 chr13 62692483 62693404 -57590908 + Lx3_Mus LINE L1 348 1298 -5686 3 1063 961 91 0 14 chr13 62693400 62693545 -57590767 + Lx3_Mus LINE L1 4704 4846 -1040 3 1063 2564 49 15 9 chr13 62693545 62693876 -57590436 - IAPEY_LTR LTR ERVK 0 385 53 3 1063 9758 86 16 0 chr13 62693880 62694935 -57589377 + Lx3_Mus LINE L1 4837 5904 -1105 3 1063 1214 159 0 20 chr13 62694935 62695092 -57589220 + B2_Mm2 SINE B2 1 157 -38 3 1063 300 53 0 0 chr13 62695092 62695130 -57589182 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 3 1063 1214 159 0 20 chr13 62695130 62695171 -57589141 + B2_Mm2 SINE B2 158 194 -1 3 1063 9758 93 29 11 chr13 62695171 62696172 -57588140 + Lx3_Mus LINE L1 5905 6905 -104 3 1063 180 0 0 0 chr13 62696172 62696192 -57588120 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 3 1063 9758 93 29 11 chr13 62696192 62696281 -57588031 + Lx3_Mus LINE L1 6906 7008 -1 3 1063 205 170 0 60 chr13 62696824 62696874 -57587438 + CT-rich Low_complexity Low_complexity 2 48 0 3 1063 241 250 16 0 chr13 62696887 62697011 -57587301 + CT-rich Low_complexity Low_complexity 3 128 0 3 1063 291 193 78 22 chr13 62697874 62697964 -57586348 - MT2A LTR ERVL 0 533 439 3 1063 1292 103 17 6 chr13 62697966 62698142 -57586170 + B2_Mm2 SINE B2 2 179 -16 3 1063 405 77 0 0 chr13 62698195 62698260 -57586052 + B2_Mm1t SINE B2 129 193 0 3 1063 369 286 53 63 chr13 62698258 62698511 -57585801 - MT2A LTR ERVL -70 531 124 3 1063 451 178 0 114 chr13 62698526 62698543 -57585769 + MT2B LTR ERVL 152 155 -446 3 1063 783 49 2 6 chr13 62698543 62698655 -57585657 + B1_Mm SINE Alu 1 109 -11 3 1063 1150 144 10 26 chr13 62698661 62698853 -57585459 - B2_Mm1t SINE B2 -3 190 2 3 1063 1168 83 0 0 chr13 62699537 62699681 -57584631 + B1_Mus1 SINE Alu 4 147 -1 3 1063 32 26 0 0 chr13 62701035 62701074 -57583238 + AT_rich Low_complexity Low_complexity 1 39 0 3 1063 21 0 0 0 chr13 62702254 62702275 -57582037 + AT_rich Low_complexity Low_complexity 1 21 0 3 1063 1226 68 0 7 chr13 62703072 62703220 -57581092 + B1_Mm SINE Alu 1 147 0 3 1063 353 373 10 31 chr13 62703482 62703612 -57580700 + ORR1D2 LTR MaLR 56 169 -198 3 1063 1063 116 0 7 chr13 62703650 62703798 -57580514 - B1_Mus2 SINE Alu 0 147 1 3 1063 305 317 71 30 chr13 62703802 62703956 -57580356 + ORR1D2 LTR MaLR 169 329 -41 3 1063 1844 261 19 27 chr13 62703956 62704471 -57579841 + RLTR11A LTR ERVK 1 511 -17 3 1063 189 94 0 0 chr13 62705200 62705232 -57579080 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 1063 583 274 14 15 chr13 62705508 62706649 -57577663 - MMSAT4 Satellite Satellite -5 1140 1 3 1063 180 77 0 0 chr13 62706795 62706821 -57577491 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 1063 1071 120 6 29 chr13 62706821 62706993 -57577319 - B2_Mm1a SINE B2 -25 168 1 3 1063 7230 214 49 64 chr13 62706994 62707677 -57576635 - MurSatRep1 Unknown Unknown -25 2112 1438 3 1063 3643 23 5 0 chr13 62707677 62708071 -57576241 + MTA_Mm LTR MaLR 1 396 0 3 1063 7230 214 49 64 chr13 62708071 62709048 -57575264 - MurSatRep1 Unknown Unknown -700 1437 425 3 1063 1216 147 16 5 chr13 62709048 62709240 -57575072 - B2_Mm2 SINE B2 0 195 2 3 1063 7230 214 49 64 chr13 62709240 62709444 -57574868 - MurSatRep1 Unknown Unknown -1713 424 254 3 1063 1023 137 7 0 chr13 62709444 62709590 -57574722 + B1_Mus1 SINE Alu 1 147 -1 3 1063 1417 114 0 5 chr13 62709594 62709788 -57574524 + B2_Mm2 SINE B2 1 193 -2 3 1063 7230 214 49 64 chr13 62709788 62709979 -57574333 - MurSatRep1 Unknown Unknown -1884 253 83 3 1063 258 32 0 0 chr13 62709994 62710025 -57574287 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 3 1063 1068 120 19 0 chr13 62710025 62710183 -57574129 - B2_Mm2 SINE B2 -33 162 2 3 1063 401 223 21 0 chr13 62710186 62710280 -57574032 - MurSatRep1 Unknown Unknown -2041 96 1 3 1063 1105 202 0 0 chr13 62710341 62710554 -57573758 - L1VL2 LINE L1 -6070 265 53 3 1063 5500 158 12 2 chr13 62710539 62712061 -57572251 + Lx2 LINE L1 4921 6460 -537 3 1063 1682 47 0 0 chr13 62713121 62713312 -57571000 + B2_Mm1a SINE B2 2 192 -1 3 1063 21 36 0 0 chr13 62713386 62713414 -57570898 + AT_rich Low_complexity Low_complexity 1 28 0 3 1063 1832 10 0 0 chr13 62714019 62714211 -57570101 + B2_Mm1a SINE B2 1 192 -1 3 1063 5186 140 65 48 chr13 62714444 62715343 -57568969 + Lx3A LINE L1 205 1181 -5803 3 1063 1161 68 0 13 chr13 62715343 62715492 -57568820 + B1_Mm SINE Alu 1 147 0 3 1063 9574 109 36 44 chr13 62715492 62715759 -57568553 + Lx3A LINE L1 1182 1440 -4446 3 1063 928 163 7 13 chr13 62715759 62715908 -57568404 + B1_Mus1 SINE Alu 1 148 0 3 1063 9574 110 33 40 chr13 62715908 62717477 -57566835 + Lx3A LINE L1 1441 2824 -3062 3 1063 1398 30 6 0 chr13 62718137 62718306 -57566006 + B2_Mm1a SINE B2 2 171 -22 3 1063 653 0 13 0 chr13 62718311 62718388 -57565924 + (GAAAA)n Simple_repeat Simple_repeat 2 79 0 3 1063 346 215 15 0 chr13 62719801 62719936 -57564376 + CT-rich Low_complexity Low_complexity 2 138 0 3 1063 181 175 0 66 chr13 62719951 62720012 -57564300 + CT-rich Low_complexity Low_complexity 3 59 0 3 1063 482 253 101 136 chr13 62720833 62721171 -57563141 - MT2B LTR ERVL 0 601 276 3 1063 237 300 32 43 chr13 62721226 62721320 -57562992 - MT2B LTR ERVL -401 132 40 3 1063 322 243 68 0 chr13 62721583 62721657 -57562655 + ID_B1 SINE B4 137 215 -9 3 1063 660 107 0 0 chr13 62722937 62723040 -57561272 + (TCCA)n Simple_repeat Simple_repeat 1 103 0 3 1063 1253 129 11 21 chr13 62723456 62723646 -57560666 + B2_Mm1t SINE B2 2 189 -4 3 1063 447 202 0 46 chr13 62723761 62723870 -57560442 + Lx4A LINE L1 6953 7056 -2 3 1063 1162 75 7 13 chr13 62724458 62724607 -57559705 + B1_Mus1 SINE Alu 1 148 0 3 1063 1211 138 5 5 chr13 62724737 62724933 -57559379 + RLTR22_Mur LTR ERVK 1413 1608 -240 3 1063 884 218 98 4 chr13 62725092 62725327 -57558985 + RLTR22_Mur LTR ERVK 1592 1848 0 3 1063 477 259 86 127 chr13 62726113 62726527 -57557785 - MT2A LTR ERVL 0 584 41 3 1063 302 142 30 52 chr13 62726657 62726723 -57557589 - B2_Mm2 SINE B2 -83 115 46 3 1063 1105 109 84 12 chr13 62726770 62726937 -57557375 - B2_Mm1a SINE B2 -14 179 1 3 1063 327 297 81 0 chr13 62727092 62727203 -57557109 + ID_B1 SINE B4 95 214 -10 3 1063 370 290 132 29 chr13 62728555 62728729 -57555583 - B3 SINE B2 -1 215 24 3 1063 312 269 60 33 chr13 62729651 62729801 -57554511 - Lx9 LINE L1 -145 7499 7346 3 1063 31 0 0 0 chr13 62729932 62729963 -57554349 + AT_rich Low_complexity Low_complexity 1 31 0 3 1063 250 250 0 0 chr13 62730012 62730064 -57554248 + RLTR18 LTR ERVK 160 211 -405 3 1063 811 324 44 0 chr13 62730230 62730502 -57553810 - MTE-int LTR MaLR -240 1340 1057 3 1063 359 286 90 20 chr13 62730560 62730660 -57553652 + B3 SINE B2 7 113 -103 3 1063 1062 90 0 0 chr13 62732552 62732685 -57551627 + B1_Mus1 SINE Alu 4 136 -12 3 1063 243 0 0 0 chr13 62732686 62732713 -57551599 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1063 36 23 0 0 chr13 62734049 62734092 -57550220 + AT_rich Low_complexity Low_complexity 1 43 0 3 1063 185 286 48 0 chr13 62734854 62734917 -57549395 + MIRc SINE MIR 101 166 -102 3 1063 965 116 0 52 chr13 62734919 62734937 -57549375 + B1_Mm SINE Alu 1 14 -133 3 1063 3855 65 17 4 chr13 62734937 62735413 -57548899 - RLTR45 LTR ERVK 0 482 1 3 1063 965 116 0 52 chr13 62735413 62735549 -57548763 + B1_Mm SINE Alu 15 147 0 3 1063 3150 52 0 29 chr13 62736320 62736696 -57547616 + RLTR10B2 LTR ERVK 1 365 0 3 1063 1212 124 51 0 chr13 62736806 62736983 -57547329 - B2_Mm2 SINE B2 -8 187 2 3 1063 216 0 0 0 chr13 62737400 62737424 -57546888 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1063 1335 27 0 0 chr13 62737424 62737571 -57546741 - B1_Mm SINE Alu 0 147 1 4 1063 620 339 60 32 chr13 62738219 62738332 -57545980 + ORR1D2 LTR MaLR 47 165 -205 4 1063 612 0 0 0 chr13 62738332 62738400 -57545912 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 1063 1103 106 0 0 chr13 62738401 62738543 -57545769 - B1_Mus2 SINE Alu -4 143 2 4 1063 620 339 60 32 chr13 62738543 62738699 -57545613 + ORR1D2 LTR MaLR 166 329 -41 4 1063 1720 260 104 22 chr13 62738699 62738941 -57545371 + RLTR11A LTR ERVK 1 231 -297 4 1063 1001 8 8 0 chr13 62738941 62739059 -57545253 + (GGAGA)n Simple_repeat Simple_repeat 3 121 0 4 1063 1720 260 104 22 chr13 62739059 62739304 -57545008 + RLTR11A LTR ERVK 232 527 -1 4 1063 620 339 60 32 chr13 62739304 62739345 -57544967 + ORR1D2 LTR MaLR 330 368 -2 4 1063 263 141 0 0 chr13 62739561 62739625 -57544687 + L1_Mus2 LINE L1 6516 6582 0 4 1063 1199 83 0 0 chr13 62739642 62739787 -57544525 + B1_Mus1 SINE Alu 2 146 -2 4 1063 217 132 0 0 chr13 62740099 62740137 -57544175 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1063 308 331 23 23 chr13 62740138 62740151 -57544161 - B3 SINE B2 0 216 204 4 1063 1267 35 14 14 chr13 62740151 62740298 -57544014 - B1_Mm SINE Alu 0 147 1 4 1063 308 331 23 23 chr13 62740298 62740417 -57543895 - B3 SINE B2 -13 203 84 4 1063 718 98 10 0 chr13 62740508 62740618 -57543694 - B1_Mm SINE Alu 0 120 1 4 1063 576 0 0 0 chr13 62740801 62740865 -57543447 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1063 595 262 8 7 chr13 62741146 62742628 -57541684 - MMSAT4 Satellite Satellite -5 1484 1 4 1063 309 313 45 67 chr13 62742563 62742830 -57541482 - MurSatRep1 Unknown Unknown -94 2043 1783 4 1063 216 67 0 0 chr13 62742847 62742877 -57541435 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 1063 836 137 89 32 chr13 62742877 62743035 -57541277 - B2_Mm1a SINE B2 -26 167 1 4 1063 6573 221 50 38 chr13 62743036 62743923 -57540389 - MurSatRep1 Unknown Unknown -25 2112 1207 4 1063 657 135 70 26 chr13 62743923 62744037 -57540275 - PB1D9 SINE Alu 0 120 2 4 1063 6573 221 50 38 chr13 62744037 62744798 -57539514 - MurSatRep1 Unknown Unknown -931 1206 440 4 1063 1217 128 21 16 chr13 62744798 62744989 -57539323 - B2_Mm2 SINE B2 -2 193 2 4 1063 6573 221 50 38 chr13 62744989 62745128 -57539184 - MurSatRep1 Unknown Unknown -1698 439 302 4 1063 349 295 113 16 chr13 62745157 62745281 -57539031 + B1_Mur2 SINE Alu 2 137 -12 4 1063 1288 96 17 11 chr13 62745360 62745539 -57538773 - B2_Mm2 SINE B2 -14 181 2 4 1063 411 215 21 0 chr13 62745539 62745632 -57538680 - MurSatRep1 Unknown Unknown -2042 95 1 4 1063 1625 267 65 9 chr13 62745758 62746190 -57538122 + RLTR20D LTR ERVK 3 460 -108 4 1063 450 0 0 0 chr13 62746190 62746240 -57538072 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1063 1625 267 65 9 chr13 62746240 62746271 -57538041 + RLTR20D LTR ERVK 461 491 -77 4 1063 886 155 35 0 chr13 62746287 62746429 -57537883 - B1_Mus1 SINE Alu 0 148 2 4 1063 459 382 16 5 chr13 62746452 62746644 -57537668 + B3 SINE B2 4 197 -19 4 1063 251 265 116 43 chr13 62746884 62747022 -57537290 + B1_Mur3 SINE Alu 2 149 0 4 1063 444 278 107 11 chr13 62747386 62747564 -57536748 - ORR1D-int LTR MaLR -18 1352 1158 4 1063 1041 120 35 0 chr13 62748378 62748520 -57535792 - B1_Mm SINE Alu 0 147 1 4 1063 491 203 18 13 chr13 62749290 62749517 -57534795 + CT-rich Low_complexity Low_complexity 1 227 0 4 1063 348 297 34 0 chr13 62750340 62750488 -57533824 - MT2A LTR ERVL 0 533 381 4 1063 363 264 20 48 chr13 62750515 62750662 -57533650 - MT2A LTR ERVL -307 226 84 4 1063 666 117 0 0 chr13 62752296 62752407 -57531905 + (TCCA)n Simple_repeat Simple_repeat 1 111 0 4 1063 350 190 36 91 chr13 62752706 62752816 -57531496 + Lx4A LINE L1 6953 7056 -2 4 1063 1052 113 0 0 chr13 62753411 62753553 -57530759 + B1_Mus1 SINE Alu 2 143 -5 4 1063 245 27 54 0 chr13 62753557 62753594 -57530718 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1063 1222 149 5 0 chr13 62753790 62753985 -57530327 + RLTR22_Mur LTR ERVK 1413 1608 -240 4 1063 935 226 60 24 chr13 62754143 62754392 -57529920 + RLTR22_Mur LTR ERVK 1591 1848 0 4 1063 485 290 180 55 chr13 62755187 62755621 -57528691 - MT2B LTR ERVL 0 601 46 4 1063 21 0 0 0 chr13 62755719 62755740 -57528572 + AT_rich Low_complexity Low_complexity 1 21 0 4 1063 271 185 18 53 chr13 62755762 62755819 -57528493 - B2_Mm2 SINE B2 -94 101 47 4 1063 1141 97 84 12 chr13 62755867 62756034 -57528278 - B2_Mm1a SINE B2 -14 179 1 4 1063 304 300 91 0 chr13 62756189 62756299 -57528013 + ID_B1 SINE B4 95 214 -10 4 1063 3075 52 0 0 chr13 62757012 62757380 -57526932 - L1Md_F3 LINE L1 -108 6474 6107 4 1063 998 46 0 8 chr13 62757380 62757511 -57526801 + L1Md_F3 LINE L1 6441 6570 -14 4 1063 1384 73 62 0 chr13 62757527 62757704 -57526608 + B2_Mm2 SINE B2 1 188 -7 4 1063 570 266 100 49 chr13 62758962 62759276 -57525036 - MT2A LTR ERVL -35 566 92 4 1063 266 279 11 11 chr13 62759311 62759398 -57524914 + Lx5 LINE L1 6702 6788 -262 4 1063 1585 177 16 16 chr13 62759404 62759720 -57524592 + RMER12 LTR ERVK 1 316 -1006 4 1063 1089 109 0 45 chr13 62759820 62759974 -57524338 - B1_Mus2 SINE Alu 0 147 1 4 1063 482 172 50 25 chr13 62759976 62760095 -57524217 + RMER12 LTR ERVK 642 763 -559 4 1063 429 257 224 26 chr13 62760136 62760330 -57523982 + RMER12 LTR ERVK 958 1187 -135 4 1063 1384 70 42 21 chr13 62760330 62760520 -57523792 - B2_Mm2 SINE B2 0 195 2 4 1063 429 257 224 26 chr13 62760520 62760553 -57523759 + RMER12 LTR ERVK 1188 1229 -93 4 1063 2727 125 38 40 chr13 62760657 62761133 -57523179 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1063 26870 15 3 0 chr13 62761133 62764080 -57520232 - IAPEz-int LTR ERVK 0 6481 3525 4 1063 941 88 24 0 chr13 62764080 62764205 -57520107 - IAPEz-int LTR ERVK -2770 4910 4783 4 1063 1847 106 0 0 chr13 62764200 62764446 -57519866 - IAPEz-int LTR ERVK -5183 2497 2252 4 1063 923 67 0 8 chr13 62764447 62764567 -57519745 - IAPEz-int LTR ERVK -5004 1477 1359 4 1063 3531 67 4 42 chr13 62764567 62765329 -57518983 - IAPEz-int LTR ERVK -5819 662 8 4 1063 2727 125 38 40 chr13 62765329 62765805 -57518507 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1063 568 231 6 77 chr13 62765909 62766078 -57518234 + RMER12 LTR ERVK 1166 1322 0 4 1063 189 139 0 0 chr13 62766235 62766278 -57518034 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1063 188 86 29 0 chr13 62766283 62766318 -57517994 + (CAAAC)n Simple_repeat Simple_repeat 4 39 0 4 1063 1064 123 7 0 chr13 62766356 62766502 -57517810 + B1_Mm SINE Alu 1 147 0 4 1063 192 77 0 0 chr13 62766502 62766528 -57517784 + (GAAAA)n Simple_repeat Simple_repeat 1 26 0 4 1063 2997 166 24 0 chr13 62766619 62767244 -57517068 - Lx2A1 LINE L1 -1087 5921 5287 4 1063 557 235 0 0 chr13 62767243 62767358 -57516954 + Lx2A1 LINE L1 5934 6048 -960 4 1063 358 62 0 44 chr13 62767604 62767672 -57516640 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 4 1063 1236 62 0 0 chr13 62767675 62767820 -57516492 - B1_Mus2 SINE Alu 0 147 3 4 1063 3136 117 6 63 chr13 62768272 62768792 -57515520 - RLTR1C LTR ERV1 -13 490 1 4 1063 355 180 0 29 chr13 62769207 62769310 -57515002 + CT-rich Low_complexity Low_complexity 2 101 0 4 1063 1278 41 0 7 chr13 62769441 62769589 -57514723 + B1_Mus2 SINE Alu 1 147 0 4 1063 370 238 29 29 chr13 62769706 62769810 -57514502 - RLTR23 LTR ERV1 -16 414 311 4 1063 712 120 252 32 chr13 62770113 62770268 -57514044 - B2_Mm1t SINE B2 -4 189 1 4 1063 411 242 40 0 chr13 62770310 62770409 -57513903 + B1F SINE Alu 9 111 -38 4 1063 461 333 9 0 chr13 62773400 62773511 -57510801 + ORR1D2 LTR MaLR 56 167 -203 4 1063 244 298 17 26 chr13 62773532 62773649 -57510663 - MMSAT4 Satellite Satellite 0 168 53 4 1063 305 382 30 30 chr13 62773978 62774280 -57510032 - MurSatRep1 Unknown Unknown -89 2048 1747 4 1063 616 247 4 4 chr13 62774071 62774948 -57509364 - MMSAT4 Satellite Satellite -5 877 1 4 1063 319 349 28 35 chr13 62774901 62775005 -57509307 - MurSatRep1 Unknown Unknown -71 2066 1972 4 1063 335 303 22 22 chr13 62775005 62775140 -57509172 - MMSAT4 Satellite Satellite -15 153 19 4 1063 319 349 28 35 chr13 62775140 62775290 -57509022 - MurSatRep1 Unknown Unknown -71 1971 1832 4 1063 7913 205 25 45 chr13 62775329 62776421 -57507891 - MurSatRep1 Unknown Unknown -11 2126 1049 4 1063 1156 79 0 0 chr13 62776421 62776560 -57507752 - B1_Mus1 SINE Alu -9 139 1 4 1063 7913 205 25 45 chr13 62776560 62776814 -57507498 - MurSatRep1 Unknown Unknown -1089 1048 785 4 1063 189 0 0 0 chr13 62776814 62776835 -57507477 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 1063 7913 205 25 45 chr13 62776835 62777082 -57507230 - MurSatRep1 Unknown Unknown -1353 784 559 4 1063 1208 75 0 20 chr13 62777082 62777232 -57507080 - B1_Mm SINE Alu 0 147 1 4 1063 7913 205 25 45 chr13 62777232 62777507 -57506805 - MurSatRep1 Unknown Unknown -1579 558 294 4 1063 1410 77 44 0 chr13 62777515 62777696 -57506616 + B2_Mm1t SINE B2 1 189 -4 4 1063 386 319 7 0 chr13 62777804 62777939 -57506373 + B1_Mur2 SINE Alu 2 137 -12 4 1063 1019 81 0 0 chr13 62778310 62778446 -57505866 + B2_Mm2 SINE B2 15 150 -45 4 1063 285 29 0 0 chr13 62778449 62778483 -57505829 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 4 1063 723 222 31 6 chr13 62778858 62779021 -57505291 + RMER12 LTR ERVK 1123 1289 -33 4 1063 308 196 0 0 chr13 62780450 62780506 -57503806 + MTB LTR MaLR 345 400 0 4 1063 1275 34 0 0 chr13 62780736 62780883 -57503429 + B1_Mus2 SINE Alu 1 147 0 4 1063 312 83 0 0 chr13 62780883 62780931 -57503381 + (A)n Simple_repeat Simple_repeat 1 48 0 4 1063 1244 35 0 0 chr13 62781110 62781255 -57503057 + B1_Mus2 SINE Alu 3 147 0 4 1063 2290 81 19 0 chr13 62781291 62781599 -57502713 - L1_Mus3 LINE L1 -12 6626 6313 4 1063 263 301 46 63 chr13 62782106 62782280 -57502032 - RMER2 LTR ERV1 -29 538 368 4 132 1544 37 5 20 chr13 62783321 62783516 -57500796 + B2_Mm1t SINE B2 2 193 0 4 1064 270 250 52 13 chr13 62783935 62784012 -57500300 - ORR1D1 LTR MaLR 0 374 295 4 1064 546 144 0 19 chr13 62784585 62784691 -57499621 + Lx4A LINE L1 6953 7056 -2 4 1064 751 104 0 0 chr13 62784943 62785049 -57499263 + B1_Mus1 SINE Alu 31 136 -12 4 1064 350 233 16 101 chr13 62785049 62785068 -57499244 + ID_B1 SINE B4 110 223 -1 4 1064 910 162 87 0 chr13 62785558 62785731 -57498581 + RLTR22_Mur LTR ERVK 1421 1608 -240 4 1064 869 233 69 24 chr13 62785876 62786122 -57498190 + RLTR22_Mur LTR ERVK 1592 1848 0 4 1064 371 282 103 106 chr13 62786886 62787174 -57497138 - MT2B LTR ERVL 0 601 318 4 1064 540 0 0 0 chr13 62787174 62787234 -57497078 + (TA)n Simple_repeat Simple_repeat 1 60 0 4 1064 371 282 103 106 chr13 62787234 62787266 -57497046 - MT2B LTR ERVL -284 317 284 4 1064 1121 75 0 7 chr13 62787335 62787483 -57496829 - B1_Mm SINE Alu 0 147 1 4 1064 214 253 208 52 chr13 62787653 62787669 -57496643 + B1F SINE Alu 29 139 -10 4 1064 303 262 100 0 chr13 62787669 62787749 -57496563 + ID_B1 SINE B4 127 214 -10 4 1064 933 75 98 0 chr13 62788479 62788612 -57495700 + B1_Mm SINE Alu 2 147 0 4 1064 269 26 26 0 chr13 62788614 62788652 -57495660 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1064 1549 48 0 0 chr13 62789164 62789352 -57494960 - B2_Mm1a SINE B2 -4 189 2 4 1064 418 301 112 34 chr13 62789482 62789661 -57494651 - B3 SINE B2 0 216 24 5 1064 4048 67 4 4 chr13 62789889 62790401 -57493911 + RLTR1B LTR ERV1 1 512 0 5 1064 2393 123 37 5 chr13 62790856 62791264 -57493048 + BGLII LTR ERVK 1 421 0 5 1064 296 200 18 0 chr13 62791859 62791914 -57492398 + RLTR18 LTR ERVK 160 215 -401 5 1064 800 301 77 14 chr13 62792077 62792363 -57491949 - MTE-int LTR MaLR -240 1340 1037 5 1064 467 204 97 0 chr13 62792403 62792506 -57491806 + B3 SINE B2 1 113 -103 5 1064 1147 74 0 0 chr13 62792522 62792670 -57491642 + B1_Mus1 SINE Alu 1 148 0 5 1064 273 149 0 0 chr13 62792671 62792738 -57491574 + (A)n Simple_repeat Simple_repeat 1 67 0 5 1064 186 43 0 0 chr13 62793020 62793043 -57491269 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 1064 1128 75 7 0 chr13 62794113 62794260 -57490052 - B1_Mus1 SINE Alu 0 148 1 5 1064 301 276 92 54 chr13 62794721 62794851 -57489461 + B1_Mur1 SINE Alu 13 147 -2 5 1064 1308 99 10 5 chr13 62794911 62795104 -57489208 + B2_Mm2 SINE B2 2 195 0 5 1064 3442 199 36 13 chr13 62795114 62795983 -57488329 + Lx5 LINE L1 5117 6010 -1040 5 1064 790 55 30 23 chr13 62795983 62796114 -57488198 + L1Md_F3 LINE L1 6453 6584 0 5 1064 1928 253 56 58 chr13 62796114 62796332 -57487980 + Lx5 LINE L1 6011 6214 -836 5 1064 1109 88 0 0 chr13 62796332 62796479 -57487833 - B1_Mm SINE Alu 0 147 1 5 1064 1928 253 56 58 chr13 62796479 62796595 -57487717 + Lx5 LINE L1 6215 6330 -720 5 1064 419 200 67 28 chr13 62796595 62796775 -57487537 + RMER17C LTR ERVK 88 274 -136 5 1064 2306 254 51 51 chr13 62796810 62797536 -57486776 + Lx5 LINE L1 6322 7047 -3 5 1064 1086 117 67 0 chr13 62797633 62797813 -57486499 + B2_Mm1t SINE B2 2 193 0 5 1064 989 66 73 0 chr13 62797864 62798001 -57486311 + B1_Mm SINE Alu 1 147 0 5 1064 189 0 0 0 chr13 62798001 62798022 -57486290 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1064 1567 142 98 0 chr13 62798104 62798399 -57485913 - ORR1A2 LTR MaLR -3 324 1 5 1064 232 318 97 35 chr13 62799226 62799340 -57484972 + RSINE1 SINE B4 9 129 -36 5 1064 848 260 5 0 chr13 62800507 62800699 -57483613 + RLTR11A2 LTR ERVK 318 510 -17 5 1064 481 251 14 11 chr13 62801450 62802324 -57481988 - MMSAT4 Satellite Satellite -4 877 1 5 1064 227 350 19 15 chr13 62802272 62802478 -57481834 - MurSatRep1 Unknown Unknown -88 2049 1843 5 1064 270 336 0 0 chr13 62802361 62802495 -57481817 - MMSAT4 Satellite Satellite 0 168 35 5 1064 4262 226 20 13 chr13 62802700 62803817 -57480495 - MurSatRep1 Unknown Unknown -11 2126 1003 5 1064 13204 134 10 6 chr13 62803819 62805512 -57478800 + L1_Mus3 LINE L1 3603 5299 -584 5 1064 1486 49 16 0 chr13 62805512 62805695 -57478617 + B2_Mm2 SINE B2 2 187 -8 5 1064 13204 88 11 7 chr13 62805695 62807025 -57477287 + L1_Mus3 LINE L1 5300 6638 0 5 1064 21 0 0 0 chr13 62807026 62807047 -57477265 + AT_rich Low_complexity Low_complexity 1 21 0 5 1064 2711 184 18 96 chr13 62807051 62807301 -57477011 - MurSatRep1 Unknown Unknown -1122 1015 765 5 1064 897 117 73 0 chr13 62807301 62807438 -57476874 + B1_Mus2 SINE Alu 1 147 0 5 1064 2711 184 18 96 chr13 62807438 62807763 -57476549 - MurSatRep1 Unknown Unknown -1373 764 491 5 1064 1077 83 0 0 chr13 62807763 62807907 -57476405 - B1_Mus1 SINE Alu 0 148 5 5 1064 2711 184 18 96 chr13 62807907 62808046 -57476266 - MurSatRep1 Unknown Unknown -1647 490 356 5 1064 333 118 0 0 chr13 62808048 62808099 -57476213 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1064 1756 239 15 60 chr13 62808232 62808713 -57475599 + RLTR20D LTR ERVK 1 459 -109 5 1064 1065 96 0 0 chr13 62808718 62808864 -57475448 + B1_Mm SINE Alu 2 147 0 5 1064 225 0 0 0 chr13 62808864 62808889 -57475423 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1064 273 309 36 0 chr13 62808927 62809011 -57475301 + RLTR20D LTR ERVK 465 551 -17 5 1064 1057 86 0 21 chr13 62809012 62809154 -57475158 + B1_Mus1 SINE Alu 2 140 -8 5 1064 414 0 0 0 chr13 62809154 62809200 -57475112 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 5 1064 492 62 0 0 chr13 62809204 62809268 -57475044 + (GGA)n Simple_repeat Simple_repeat 2 65 0 5 1064 377 382 22 0 chr13 62809322 62809458 -57474854 + B3 SINE B2 57 195 -21 5 1064 711 350 61 43 chr13 62809970 62810346 -57473966 - MTD LTR MaLR -19 400 18 5 1064 985 125 21 93 chr13 62810521 62810715 -57473597 + B2_Mm2 SINE B2 2 181 -14 5 1064 30 27 0 0 chr13 62810836 62810873 -57473439 + AT_rich Low_complexity Low_complexity 1 37 0 5 1064 239 287 88 24 chr13 62811064 62811189 -57473123 + ID_B1 SINE B4 92 224 0 5 1064 579 29 0 0 chr13 62811323 62811392 -57472920 + (TA)n Simple_repeat Simple_repeat 1 69 0 5 1064 1148 68 0 0 chr13 62813460 62813606 -57470706 - B1_Mus2 SINE Alu 0 147 2 5 1064 312 295 165 8 chr13 62814395 62814528 -57469784 - HAL1-3A_ME LINE L1 -421 2437 2284 5 1064 363 242 32 21 chr13 62814726 62814819 -57469493 - RLTR23 LTR ERV1 0 430 337 5 1064 347 284 146 62 chr13 62815347 62815621 -57468691 - MT2B LTR ERVL 0 601 305 5 1064 7316 50 30 5 chr13 62815623 62816558 -57467754 + RLTR13A2 LTR ERVK 1 958 0 5 1064 1034 141 0 16 chr13 62816560 62816747 -57467565 + ETnERV3-int LTR ERVK 3 186 -5622 5 1064 42179 88 19 13 chr13 62817302 62821803 -57462509 + ETnERV3-int LTR ERVK 186 3977 -1831 5 1064 189 94 0 0 chr13 62821803 62821835 -57462477 + (TTAA)n Simple_repeat Simple_repeat 2 33 0 5 1064 42179 40 17 12 chr13 62821835 62823620 -57460692 + ETnERV3-int LTR ERVK 3978 5807 -1 5 1064 7316 50 30 5 chr13 62823625 62824560 -57459752 + RLTR13A2 LTR ERVK 1 958 0 5 1064 238 307 0 26 chr13 62824560 62824637 -57459675 - MT2B LTR ERVL -386 147 73 5 1064 248 317 39 10 chr13 62824613 62824715 -57459597 - MT2B LTR ERVL -404 129 25 5 1064 650 245 105 11 chr13 62825521 62825711 -57458601 - B3 SINE B2 0 216 9 5 1064 50 59 0 0 chr13 62825733 62825818 -57458494 + AT_rich Low_complexity Low_complexity 1 85 0 5 1064 439 112 327 27 chr13 62825847 62825957 -57458355 - B2_Mm2 SINE B2 -6 189 47 5 1064 1076 152 11 0 chr13 62826033 62826210 -57458102 - B2_Mm1t SINE B2 -14 179 1 5 1064 990 77 7 47 chr13 62826283 62826432 -57457880 + B1_Mus2 SINE Alu 5 147 0 5 1064 1135 75 0 0 chr13 62826583 62826730 -57457582 - B1_Mus1 SINE Alu 0 148 2 5 1064 273 225 33 22 chr13 62826825 62826916 -57457396 - Lx9 LINE L1 -168 7476 7385 5 1064 1793 223 92 104 chr13 62826987 62827603 -57456709 + RLTR18 LTR ERVK 3 611 -5 5 1064 4501 10 0 0 chr13 62827856 62828349 -57455963 - MT2_Mm LTR ERVL 0 493 1 5 1064 302 0 0 0 chr13 62828349 62828387 -57455925 - MERVL-int LTR ERVL 0 5485 5448 5 1064 390 167 46 35 chr13 62828387 62828474 -57455838 - ORR1A3-int LTR MaLR -1323 640 553 5 1064 45602 17 0 0 chr13 62828474 62833833 -57450479 - MERVL-int LTR ERVL -125 5360 1 5 1064 4784 10 0 0 chr13 62833833 62834326 -57449986 - MT2_Mm LTR ERVL 0 493 1 5 1064 1036 261 94 21 chr13 62834896 62835236 -57449076 - ORR1D1 LTR MaLR -9 365 1 5 1064 671 311 106 0 chr13 62835316 62835589 -57448723 - MTE-int LTR MaLR -241 1339 1038 5 1064 1418 76 27 5 chr13 62835650 62835835 -57448477 + B2_Mm2 SINE B2 1 189 -6 5 1064 1230 68 0 0 chr13 62835841 62835988 -57448324 + B1_Mus2 SINE Alu 1 147 0 5 1064 198 0 0 0 chr13 62835988 62836010 -57448302 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1064 2145 207 20 7 chr13 62836336 62836784 -57447528 + Lx4B LINE L1 6353 6806 -252 5 1064 1670 179 138 37 chr13 62836795 62837395 -57446917 + RMER12 LTR ERVK 1 680 -642 5 1064 1319 91 0 109 chr13 62837395 62837606 -57446706 - B2_Mm2 SINE B2 -6 189 2 5 1064 1670 164 83 52 chr13 62837606 62837716 -57446596 + RMER12 LTR ERVK 681 775 -547 5 1064 4554 141 42 55 chr13 62837744 62838011 -57446301 - RMER17A2 LTR ERVK 0 906 646 5 1064 594 0 0 0 chr13 62838011 62838077 -57446235 + (GA)n Simple_repeat Simple_repeat 2 67 0 5 1064 4554 141 42 55 chr13 62838077 62838726 -57445586 - RMER17A2 LTR ERVK -261 645 1 5 1064 464 271 193 18 chr13 62838739 62838925 -57445387 + RMER12 LTR ERVK 975 1191 -131 5 1064 1520 75 11 0 chr13 62838925 62839113 -57445199 + B2_Mm1t SINE B2 3 192 -1 5 1064 464 271 193 18 chr13 62839113 62839144 -57445168 + RMER12 LTR ERVK 1192 1230 -92 5 1064 366 236 110 91 chr13 62839348 62839502 -57444810 + RMER12 LTR ERVK 1166 1322 0 5 1064 245 226 19 19 chr13 62839543 62839597 -57444715 + Lx4B LINE L1 6895 6948 -110 5 1064 3036 142 58 2 chr13 62839782 62840401 -57443911 - Lx2A1 LINE L1 -1079 5929 5288 5 1064 5984 168 20 29 chr13 62840401 62841482 -57442830 + Lx2A1 LINE L1 5934 7005 -3 5 1064 198 160 0 0 chr13 62841554 62841604 -57442708 + T-rich Low_complexity Low_complexity 1 50 0 5 1064 1145 84 14 0 chr13 62841605 62841747 -57442565 - B1_Mus1 SINE Alu 0 148 5 5 1064 1201 76 0 0 chr13 62842504 62842648 -57441664 + B1_Mus2 SINE Alu 4 147 0 5 1064 1284 203 26 4 chr13 62842723 62842995 -57441317 - L1_Mur2 LINE L1 -292 5585 5308 5 1064 443 162 122 19 chr13 62842980 62843087 -57441225 - L1_Mur2 LINE L1 -3148 2732 2615 5 1064 28 0 0 0 chr13 62843246 62843274 -57441038 + AT_rich Low_complexity Low_complexity 1 28 0 5 1064 2771 206 46 16 chr13 62843334 62843940 -57440372 - RLTR25B LTR ERVK -404 624 1 5 1064 207 0 0 0 chr13 62844285 62844308 -57440004 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1064 1142 89 19 0 chr13 62844308 62844466 -57439846 - B2_Mm2 SINE B2 -33 162 2 5 1064 411 215 21 0 chr13 62844466 62844559 -57439753 - MurSatRep1 Unknown Unknown -2042 95 1 5 1064 1170 192 0 0 chr13 62844620 62844833 -57439479 - L1VL2 LINE L1 -6070 265 53 5 1064 8248 163 8 8 chr13 62844818 62846894 -57437418 + Lx2 LINE L1 4921 6997 0 5 1064 333 382 115 11 chr13 62846912 62847190 -57437122 - MTD LTR MaLR -95 324 18 5 1064 359 263 141 0 chr13 62848046 62848145 -57436167 - B3A SINE B2 -34 164 52 5 1064 1709 37 0 0 chr13 62849872 62850059 -57434253 + B2_Mm1a SINE B2 2 188 -5 5 1064 4966 148 67 61 chr13 62850989 62851897 -57432415 + L1_Mur1 LINE L1 205 1178 -5806 5 1064 1054 102 0 20 chr13 62851897 62852047 -57432265 + B1_Mus2 SINE Alu 1 147 0 5 1064 9525 105 36 43 chr13 62852047 62852319 -57431993 + L1_Mur1 LINE L1 1179 1440 -4446 5 1064 982 152 0 14 chr13 62852319 62852466 -57431846 + B1_Mus1 SINE Alu 4 148 0 5 1064 9525 98 30 41 chr13 62852466 62853814 -57430498 + L1_Mur1 LINE L1 1441 2762 -3124 5 1064 1156 151 87 5 chr13 62853814 62854033 -57430279 + Lx3A LINE L1 6745 6981 0 5 1064 445 188 7 15 chr13 62856095 62856230 -57428082 + CT-rich Low_complexity Low_complexity 2 135 0 5 1064 208 161 17 35 chr13 62856249 62856307 -57428005 + CT-rich Low_complexity Low_complexity 3 59 0 5 1064 560 273 81 104 chr13 62857127 62857511 -57426801 - MT2B LTR ERVL 0 601 70 5 1064 253 287 33 33 chr13 62857484 62857574 -57426738 - MT2B LTR ERVL -404 129 40 5 1064 255 284 68 0 chr13 62857837 62857911 -57426401 + ID_B1 SINE B4 137 215 -9 5 1064 228 163 0 0 chr13 62859178 62859221 -57425091 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 5 1064 1540 39 66 0 chr13 62859654 62859814 -57424498 + B2_Mm1a SINE B2 1 160 -33 5 1064 189 0 0 0 chr13 62859814 62859835 -57424477 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 5 1064 1540 39 66 0 chr13 62859835 62859855 -57424457 + B2_Mm1a SINE B2 161 191 -2 5 1064 1458 90 11 0 chr13 62859869 62860058 -57424254 + B2_Mm1t SINE B2 2 192 -1 5 1064 367 204 61 10 chr13 62860238 62860337 -57423975 + Lx4A LINE L1 6953 7056 -2 5 1064 189 0 0 0 chr13 62860536 62860557 -57423755 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 6 1064 374 263 8 85 chr13 62860896 62861025 -57423287 + MT2B LTR ERVL 139 257 -344 6 1064 980 108 0 0 chr13 62860930 62861069 -57423243 + B1_Mus1 SINE Alu 9 147 -1 6 1064 985 141 107 0 chr13 62861286 62861463 -57422849 + RLTR22_Mur LTR ERVK 1413 1608 -240 6 1064 897 236 60 28 chr13 62861622 62861871 -57422441 + RLTR22_Mur LTR ERVK 1592 1848 0 6 1064 394 310 70 97 chr13 62862657 62862986 -57421326 - MT2B LTR ERVL 0 601 282 6 1064 237 286 47 12 chr13 62863011 62863096 -57421216 - MT2B LTR ERVL -405 128 41 6 1064 279 152 176 51 chr13 62863176 62863290 -57421022 - B2_Mm2 SINE B2 -2 193 47 6 1064 1141 97 84 12 chr13 62863339 62863506 -57420806 - B2_Mm1a SINE B2 -14 179 1 6 1064 313 306 81 0 chr13 62863661 62863772 -57420540 + ID_B1 SINE B4 95 214 -10 6 1064 1269 68 0 0 chr13 62864489 62864636 -57419676 + B1_Mus2 SINE Alu 1 147 0 6 1064 375 322 53 70 chr13 62865282 62865469 -57418843 - B3 SINE B2 -9 207 24 6 1064 362 274 54 14 chr13 62866388 62866536 -57417776 - Lx9 LINE L1 -145 7499 7346 6 1064 409 246 13 182 chr13 62866613 62866772 -57417540 + RLTR18 LTR ERVK 72 203 -413 6 1064 815 331 33 0 chr13 62866946 62867221 -57417091 - MTE-int LTR MaLR -240 1340 1057 6 1064 273 264 168 42 chr13 62867279 62867374 -57416938 + B3 SINE B2 7 113 -103 6 1064 1277 104 11 27 chr13 62868603 62868790 -57415522 - B2_Mm1t SINE B2 -8 185 2 6 1064 261 0 0 0 chr13 62868814 62868843 -57415469 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1064 1077 64 0 7 chr13 62869493 62869629 -57414683 + B1_Mus1 SINE Alu 5 140 -8 6 1064 279 0 0 0 chr13 62869629 62869660 -57414652 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1064 231 369 0 73 chr13 62870839 62870962 -57413350 - B1_Mus2 SINE Alu -33 114 1 6 1064 234 351 81 0 chr13 62870889 62870963 -57413349 - ID_B1 SINE B4 -64 160 81 6 1064 1061 92 0 14 chr13 62871567 62871703 -57412609 + B1_Mm SINE Alu 1 135 -12 6 1064 383 16 62 0 chr13 62871703 62871767 -57412545 + (CAAAA)n Simple_repeat Simple_repeat 2 69 0 6 1064 352 326 46 173 chr13 62872693 62872845 -57411467 + ORR1D2 LTR MaLR 63 184 -186 6 1064 1162 77 0 0 chr13 62872845 62872988 -57411324 - B1_Mus2 SINE Alu -4 143 1 6 1064 352 326 46 173 chr13 62872988 62873143 -57411169 + ORR1D2 LTR MaLR 185 329 -41 6 1064 1839 277 21 26 chr13 62873143 62873674 -57410638 + RLTR11A LTR ERVK 1 528 0 6 1064 206 118 0 0 chr13 62874398 62874432 -57409880 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1064 582 281 8 8 chr13 62874616 62876120 -57408192 - MMSAT4 Satellite Satellite -4 1743 50 6 1064 386 318 30 25 chr13 62876120 62876317 -57407995 - MurSatRep1 Unknown Unknown -88 2049 1852 6 1064 253 335 29 54 chr13 62876294 62876534 -57407778 - MurSatRep1 Unknown Unknown -94 2043 1810 6 1064 582 281 8 8 chr13 62876317 62876359 -57407953 - MMSAT4 Satellite Satellite -4 49 1 6 1064 252 59 0 0 chr13 62876578 62876612 -57407700 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1064 1010 145 6 29 chr13 62876612 62876783 -57407529 - B2_Mm1a SINE B2 -26 167 1 6 1064 6718 223 45 44 chr13 62876833 62877181 -57407131 - MurSatRep1 Unknown Unknown -67 2070 1710 6 1064 1500 69 0 36 chr13 62877181 62877376 -57406936 - B2_Mm1t SINE B2 -4 189 2 6 1064 6718 223 45 44 chr13 62877376 62878645 -57405667 - MurSatRep1 Unknown Unknown -428 1709 425 6 1064 1204 142 16 5 chr13 62878645 62878836 -57405476 - B2_Mm2 SINE B2 -1 194 2 6 1064 6718 223 45 44 chr13 62878836 62879029 -57405283 - MurSatRep1 Unknown Unknown -1713 424 256 6 1064 663 88 50 0 chr13 62879041 62879156 -57405156 + B1_Mus2 SINE Alu 1 138 -9 6 1064 198 0 0 0 chr13 62879156 62879178 -57405134 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 6 1064 852 229 18 99 chr13 62879179 62879357 -57404955 - MurSatRep1 Unknown Unknown -1887 250 73 6 1064 1403 57 34 6 chr13 62879357 62879532 -57404780 - B2_Mm2 SINE B2 -14 181 2 6 1064 852 229 18 99 chr13 62879532 62879625 -57404687 - MurSatRep1 Unknown Unknown -2065 72 1 6 1064 622 288 63 43 chr13 62879751 62879958 -57404354 + RLTR20D LTR ERVK 3 213 -355 6 1064 195 204 0 0 chr13 62880303 62880347 -57403965 + GA-rich Low_complexity Low_complexity 2 45 0 6 1064 914 260 90 7 chr13 62881167 62881414 -57402898 + RLTR20D LTR ERVK 191 460 -108 6 1064 252 100 0 0 chr13 62881414 62881454 -57402858 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1064 914 260 90 7 chr13 62881454 62881485 -57402827 + RLTR20D LTR ERVK 461 492 -76 6 1064 183 42 0 0 chr13 62881486 62881510 -57402802 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1064 898 150 23 0 chr13 62881510 62881643 -57402669 - B1_Mus1 SINE Alu -11 137 2 6 1064 1147 168 38 53 chr13 62881741 62882005 -57402307 + Lx LINE L1 6389 6648 -6 6 1064 240 328 85 48 chr13 62882098 62882287 -57402025 - MTD LTR MaLR -214 205 10 6 1064 306 296 135 20 chr13 62882980 62883128 -57401184 - B3 SINE B2 0 216 52 6 1064 531 281 81 114 chr13 62883430 62883763 -57400549 - MT2B LTR ERVL 0 601 280 6 1064 956 144 7 0 chr13 62883811 62883957 -57400355 + B1_Mm SINE Alu 1 147 0 6 1064 244 279 37 37 chr13 62883984 62884066 -57400246 - MT2B LTR ERVL -412 121 40 6 1064 267 270 68 0 chr13 62884329 62884403 -57399909 + ID_B1 SINE B4 137 215 -9 6 1064 1251 81 0 0 chr13 62885522 62885670 -57398642 - B1_Mus1 SINE Alu 0 148 1 6 1064 249 139 0 0 chr13 62885850 62885893 -57398419 + (TCCA)n Simple_repeat Simple_repeat 1 43 0 6 1064 322 303 31 63 chr13 62885894 62886021 -57398291 + RMER12 LTR ERVK 941 1063 -259 6 1064 769 198 21 63 chr13 62886449 62886638 -57397674 + RMER12 LTR ERVK 1142 1322 0 6 1064 532 244 75 6 chr13 62886809 62886970 -57397342 + RLTR22_Mur LTR ERVK 1677 1848 0 6 1064 367 296 93 97 chr13 62887734 62888022 -57396290 - MT2B LTR ERVL 0 601 318 6 1064 225 65 0 0 chr13 62888022 62888053 -57396259 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 1064 367 296 93 97 chr13 62888053 62888085 -57396227 - MT2B LTR ERVL -284 317 282 6 1064 1197 68 7 0 chr13 62888161 62888307 -57396005 - B1_Mm SINE Alu 0 147 1 6 1064 272 306 81 0 chr13 62888462 62888573 -57395739 + ID_B1 SINE B4 95 214 -10 6 1064 1168 68 0 0 chr13 62889303 62889449 -57394863 + B1_Mm SINE Alu 2 147 0 6 1064 1543 49 0 0 chr13 62889990 62890175 -57394137 - B2_Mm1a SINE B2 -7 186 2 6 1064 359 295 112 34 chr13 62890305 62890484 -57393828 - B3 SINE B2 0 216 24 6 1064 31 58 0 0 chr13 62890502 62890554 -57393758 + AT_rich Low_complexity Low_complexity 1 52 0 6 1064 2669 34 0 42 chr13 62890572 62890908 -57393404 - RLTRETN_Mm LTR ERVK 0 322 1 6 1064 1264 34 0 0 chr13 62891009 62891156 -57393156 + B1_Mus2 SINE Alu 1 147 0 6 1064 435 68 0 0 chr13 62891610 62891669 -57392643 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1064 298 33 0 197 chr13 62892843 62892866 -57391446 - B2_Mm1a SINE B2 -6 187 165 6 1064 982 9 0 0 chr13 62892866 62892973 -57391339 + U6 snRNA snRNA 1 107 0 6 1064 5996 38 1 3 chr13 62892975 62893688 -57390624 + L1Md_F2 LINE L1 5858 6569 -13 6 1064 298 33 0 197 chr13 62893688 62893702 -57390610 - B2_Mm1a SINE B2 -29 164 161 6 1064 207 0 0 0 chr13 62893702 62893725 -57390587 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 6 1064 298 33 0 197 chr13 62893725 62893759 -57390553 - B2_Mm1a SINE B2 -33 160 127 6 1064 234 0 0 0 chr13 62894490 62894516 -57389796 + (CCA)n Simple_repeat Simple_repeat 3 28 0 6 1064 414 223 11 0 chr13 62894875 62894969 -57389343 - B1_Mur2 SINE Alu -5 144 50 6 1064 5713 191 40 5 chr13 62894977 62896158 -57388154 - MurSatRep1 Unknown Unknown -564 1573 352 6 1064 15225 16 10 0 chr13 62896145 62897882 -57386430 + L1Md_T LINE L1 3833 5586 -297 6 1064 8158 53 0 19 chr13 62897882 62898373 -57385939 + L1Md_T LINE L1 5587 6077 -505 6 1064 1654 31 5 0 chr13 62898373 62898564 -57385748 + B2_Mm1t SINE B2 2 193 0 6 1064 8158 53 0 19 chr13 62898564 62899087 -57385225 + L1Md_T LINE L1 6078 6582 0 6 1064 401 173 0 12 chr13 62899091 62899173 -57385139 - MurSatRep1 Unknown Unknown -1764 373 293 6 1064 451 294 7 0 chr13 62899184 62899320 -57384992 + B1_Mur2 SINE Alu 1 137 -12 6 1064 422 211 0 201 chr13 62899320 62899402 -57384910 - MurSatRep1 Unknown Unknown -1990 147 79 6 1064 1317 89 0 32 chr13 62899402 62899588 -57384724 + B2_Mm2 SINE B2 2 181 -14 6 1064 1231 48 0 7 chr13 62899590 62899738 -57384574 + B1_Mus2 SINE Alu 1 147 0 6 1064 422 211 0 201 chr13 62899738 62899836 -57384476 - MurSatRep1 Unknown Unknown -2059 78 1 6 1064 423 336 14 36 chr13 62899926 62900145 -57384167 + B3 SINE B2 2 215 -1 6 1064 359 288 36 36 chr13 62900365 62900502 -57383810 + B1_Mur4 SINE Alu 14 150 0 6 1064 1772 328 82 55 chr13 62900812 62901785 -57382527 - MTD-int LTR MaLR -10 1360 357 6 1064 1260 110 5 55 chr13 62901785 62901987 -57382325 + B2_Mm2 SINE B2 1 192 -3 6 1064 1772 328 82 55 chr13 62901987 62902335 -57381977 - MTD-int LTR MaLR -1014 356 2 6 1064 310 354 112 6 chr13 62902352 62902531 -57381781 - MTD LTR MaLR -14 405 208 6 1064 21 0 0 0 chr13 62903857 62903878 -57380434 + AT_rich Low_complexity Low_complexity 1 21 0 6 1064 4782 37 0 12 chr13 62904341 62904918 -57379394 - L1Md_T LINE L1 0 6582 6013 6 1064 1260 20 0 7 chr13 62904921 62905069 -57379243 - B1_Mus2 SINE Alu 0 147 1 6 1064 201 60 38 57 chr13 62905948 62906001 -57378311 + T-rich Low_complexity Low_complexity 2 53 0 6 1064 1205 48 0 7 chr13 62907046 62907193 -57377119 + B1_Mus1 SINE Alu 2 147 -1 6 1064 240 143 0 0 chr13 62907194 62907250 -57377062 + (A)n Simple_repeat Simple_repeat 1 56 0 6 1064 2193 119 11 16 chr13 62907250 62907617 -57376695 + Lx2 LINE L1 6631 6995 -2 6 1064 896 229 78 25 chr13 62907711 62908097 -57376215 + Lx6 LINE L1 916 1318 -5768 6 1064 7742 195 36 30 chr13 62908092 62908936 -57375376 + Lx6 LINE L1 1216 2082 -3798 6 1064 288 0 0 0 chr13 62908936 62908968 -57375344 + (CCA)n Simple_repeat Simple_repeat 1 32 0 6 1064 7742 195 36 30 chr13 62908968 62909251 -57375061 + Lx6 LINE L1 2083 2367 -3513 6 1064 2610 92 6 19 chr13 62909251 62909615 -57374697 - RLTR10D LTR ERVK 0 359 1 6 1064 7742 195 36 30 chr13 62909615 62909814 -57374498 + Lx6 LINE L1 2368 2580 -3300 6 1064 1064 70 0 0 chr13 62909814 62909943 -57374369 + B1_Mm SINE Alu 1 129 -18 6 1064 7742 195 36 30 chr13 62909943 62909961 -57374351 + Lx6 LINE L1 2581 2581 -3299 6 1064 387 0 0 0 chr13 62909961 62910004 -57374308 + (GA)n Simple_repeat Simple_repeat 2 44 0 6 1064 7742 195 36 30 chr13 62910004 62910040 -57374272 + Lx6 LINE L1 2581 2612 -3268 6 1064 1420 77 0 30 chr13 62910040 62910241 -57374071 + B2_Mm2 SINE B2 1 195 0 6 1064 7742 195 36 30 chr13 62910241 62910762 -57373550 + Lx6 LINE L1 2613 3132 -2748 6 1064 6214 216 58 25 chr13 62910741 62912930 -57371382 + Lx6 LINE L1 4324 6595 -865 6 1064 1401 265 10 67 chr13 62912978 62913395 -57370917 + Lx6 LINE L1 7059 7451 -9 6 1064 1158 69 0 14 chr13 62913805 62913952 -57370360 + B1_Mm SINE Alu 1 145 -2 6 1064 323 23 23 0 chr13 62913953 62913997 -57370315 + (CAAAAA)n Simple_repeat Simple_repeat 5 49 0 6 1064 29 90 0 0 chr13 62914343 62914421 -57369891 + GC_rich Low_complexity Low_complexity 1 78 0 6 1065 3146 26 78 3 chr13 62916319 62916701 -57367611 + IAPLTR2a LTR ERVK 1 411 0 6 1065 2725 77 53 15 chr13 62916991 62917385 -57366927 - RLTR9E LTR ERVK 0 409 1 6 1065 3023 129 72 46 chr13 62917700 62917962 -57366350 - RLTR31B_Mm LTR ERVK 0 557 276 6 1065 1248 98 11 0 chr13 62917962 62918136 -57366176 - B2_Mm1t SINE B2 -14 179 4 6 1065 3023 129 72 46 chr13 62918136 62918416 -57365896 - RLTR31B_Mm LTR ERVK -282 275 1 6 1065 3480 25 2 0 chr13 62918497 62918892 -57365420 + MTA_Mm LTR MaLR 1 396 0 6 1065 1241 48 0 0 chr13 62919386 62919533 -57364779 + B1_Mus2 SINE Alu 1 147 0 7 1065 299 206 76 0 chr13 62921081 62921173 -57363139 + L1MC LINE L1 4967 5065 -1081 7 1065 2315 98 221 87 chr13 62921289 62921747 -57362565 - MURVY-LTR LTR ERV1 0 519 1 7 1065 1234 41 0 0 chr13 62922339 62922485 -57361827 - B1_Mm SINE Alu 0 147 2 7 1065 2266 156 10 8 chr13 62922579 62922973 -57361339 + Lx2B LINE L1 6306 6700 -300 7 1065 233 238 32 0 chr13 62922971 62923034 -57361278 - Lx8 LINE L1 -1111 6362 6298 7 1065 184 30 61 0 chr13 62923043 62923076 -57361236 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1065 525 288 109 116 chr13 62923124 62923723 -57360589 + RMER13A LTR ERVK 30 684 -224 7 1065 536 327 117 45 chr13 62923736 62924198 -57360114 - Lx8 LINE L1 -1185 6288 5794 7 1065 1234 119 11 0 chr13 62924203 62924379 -57359933 + B2_Mm1t SINE B2 2 179 -14 7 1065 249 169 70 0 chr13 62924398 62924469 -57359843 + (AGCTG)n Simple_repeat Simple_repeat 3 78 0 7 1065 336 87 322 26 chr13 62924472 62924587 -57359725 + B2_Mm2 SINE B2 47 195 0 7 1065 512 249 75 46 chr13 62924617 62924857 -57359455 - Lx8 LINE L1 -388 5492 5246 7 1065 548 248 28 35 chr13 62924884 62925026 -57359286 - B1_Mur2 SINE Alu -6 143 3 7 1065 336 254 173 21 chr13 62925238 62925475 -57358837 - L1ME1 LINE L1 -238 5941 5669 7 1065 1189 74 0 0 chr13 62925511 62925659 -57358653 - B1_Mus1 SINE Alu 0 148 1 7 1065 216 132 0 50 chr13 62925806 62925846 -57358466 + C-rich Low_complexity Low_complexity 5 42 0 7 1065 745 236 0 0 chr13 62929119 62929267 -57355045 + B1F2 SINE Alu 1 148 -1 7 1065 435 280 121 0 chr13 62929278 62929410 -57354902 + B3A SINE B2 1 148 -50 7 1065 335 145 14 0 chr13 62929959 62930028 -57354284 + GA-rich Low_complexity Low_complexity 2 71 0 7 1065 532 236 219 27 chr13 62930295 62930482 -57353830 + RMER15 LTR ERVL 353 575 0 7 1065 564 268 47 16 chr13 62931606 62931735 -57352577 - ETnERV2-int LTR ERVK -204 7202 7070 7 1065 4217 112 12 6 chr13 62931799 62932458 -57351854 + RMER17B LTR ERVK 1 663 -295 7 1065 321 254 124 51 chr13 62932586 62932723 -57351589 - RMER15-int LTR ERVL -493 4506 4360 7 1065 245 330 44 0 chr13 62932771 62932862 -57351450 - Lx8 LINE L1 -1126 6347 6253 7 1065 1403 78 15 45 chr13 62932889 62933090 -57351222 - B2_Mm2 SINE B2 0 195 1 7 1065 935 319 39 11 chr13 62933323 62933761 -57350551 - L1M2 LINE L1 -3258 2885 2436 7 1065 806 82 197 0 chr13 62934193 62934315 -57349997 + B1_Mus1 SINE Alu 3 148 0 7 1065 258 105 0 0 chr13 62934315 62934353 -57349959 + (A)n Simple_repeat Simple_repeat 1 38 0 7 1065 532 207 23 17 chr13 62935066 62935238 -57349074 + CT-rich Low_complexity Low_complexity 4 176 0 7 1065 1403 86 11 0 chr13 62935421 62935607 -57348705 - B2_Mm1t SINE B2 -4 189 2 7 1065 1289 111 16 0 chr13 62936904 62937093 -57347219 + B2_Mm1t SINE B2 1 192 -1 7 1065 402 186 0 0 chr13 62937411 62937497 -57346815 + (TA)n Simple_repeat Simple_repeat 1 86 0 7 1065 1385 126 46 5 chr13 62937634 62937850 -57346462 + URR1A DNA MER1_type 1 225 -1 7 1065 246 62 0 0 chr13 62938942 62938974 -57345338 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 7 1065 1215 48 0 7 chr13 62939024 62939171 -57345141 + B1_Mus1 SINE Alu 3 148 0 7 1065 189 0 0 0 chr13 62939444 62939465 -57344847 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1065 1055 54 0 130 chr13 62939465 62939634 -57344678 - B1_Mm SINE Alu 0 147 1 7 1065 342 276 0 0 chr13 62939954 62940192 -57344120 + (CA)n Simple_repeat Simple_repeat 1 238 0 7 1065 1639 21 0 16 chr13 62941053 62941242 -57343070 + B2_Mm1a SINE B2 2 187 -6 7 1065 249 57 0 0 chr13 62941343 62941378 -57342934 + (GA)n Simple_repeat Simple_repeat 1 35 0 7 1065 963 218 5 0 chr13 62941846 62942039 -57342273 + B3 SINE B2 1 194 -22 7 1065 266 0 0 29 chr13 62942039 62942074 -57342238 + (TAAAA)n Simple_repeat Simple_repeat 5 38 0 7 1065 1167 82 0 0 chr13 62942093 62942232 -57342080 + B1_Mus1 SINE Alu 2 140 -8 7 1065 207 0 0 0 chr13 62942232 62942255 -57342057 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 7 1065 590 316 79 0 chr13 62942290 62942480 -57341832 + B4 SINE B4 1 205 -87 7 1065 342 0 0 0 chr13 62942516 62942554 -57341758 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1065 24 0 0 0 chr13 62943562 62943586 -57340726 + AT_rich Low_complexity Low_complexity 1 24 0 7 1065 746 104 9 0 chr13 62943612 62943718 -57340594 + B2_Mm1t SINE B2 59 165 -28 7 1065 1026 86 48 15 chr13 62943720 62943887 -57340425 - B2_Mm2 SINE B2 0 216 9 7 1065 403 295 209 46 chr13 62944427 62944788 -57339524 + MER90 LTR ERV1 148 600 -14 7 1065 228 233 0 0 chr13 62944852 62944895 -57339417 + RLTR13D3 LTR ERVK 1 43 -1071 7 1065 2745 70 70 5 chr13 62944906 62945277 -57339035 + MTA_Mm LTR MaLR 1 395 -1 7 1065 253 191 0 0 chr13 62945680 62945722 -57338590 + B2_Mm2 SINE B2 1 42 -153 7 1065 438 256 82 78 chr13 62945869 62946141 -57338171 + RLTR13D3 LTR ERVK 750 1114 0 7 1065 358 367 6 0 chr13 62946175 62946344 -57337968 + (TG)n Simple_repeat Simple_repeat 1 170 0 7 1065 487 341 0 0 chr13 62946354 62946593 -57337719 + (TG)n Simple_repeat Simple_repeat 1 239 0 7 1065 306 0 0 0 chr13 62946636 62946670 -57337642 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1065 564 282 68 86 chr13 62946694 62946973 -57337339 - B4A SINE B4 -18 274 1 7 1065 424 278 0 53 chr13 62947024 62947138 -57337174 + PB1D10 SINE Alu 2 109 -8 7 1065 714 11 32 0 chr13 62947142 62947237 -57337075 + (TC)n Simple_repeat Simple_repeat 1 98 0 7 1065 1327 89 39 11 chr13 62947240 62947422 -57336890 - B2_Mm2 SINE B2 -8 187 1 7 1065 314 287 80 24 chr13 62950186 62950311 -57334001 - MER3 DNA MER1_type -4 205 74 7 1065 5962 124 85 21 chr13 62951563 62951967 -57332345 + Lx3B LINE L1 5866 6266 -707 7 1065 1170 68 0 0 chr13 62951967 62952113 -57332199 + B1_Mm SINE Alu 1 146 -1 7 1065 5962 124 85 21 chr13 62952113 62952746 -57331566 + Lx3B LINE L1 6267 6968 -5 7 1065 929 311 20 12 chr13 62953056 62953310 -57331002 - B4 SINE B4 -19 273 18 7 1065 1302 245 82 3 chr13 62953826 62954129 -57330183 + MTD LTR MaLR 42 368 -51 7 1065 498 296 91 149 chr13 62954145 62954649 -57329663 + MLT1E2 LTR MaLR 151 625 -2 7 1065 509 284 0 0 chr13 62954728 62954837 -57329475 + PB1D10 SINE Alu 8 116 -1 7 1065 1229 219 141 38 chr13 62956899 62957269 -57327043 + MTD LTR MaLR 7 414 -5 7 1065 270 0 0 0 chr13 62957316 62957346 -57326966 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1065 198 0 0 0 chr13 62959128 62959150 -57325162 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1065 22 0 0 0 chr13 62960283 62960305 -57324007 + AT_rich Low_complexity Low_complexity 1 22 0 7 1065 288 252 230 10 chr13 62960334 62960434 -57323878 + B3A SINE B2 31 152 -46 7 1065 3197 74 19 113 chr13 62960492 62961024 -57323288 - RLTR45 LTR ERVK 0 482 1 7 1065 698 150 113 0 chr13 62961522 62961673 -57322639 + B2_Mm2 SINE B2 1 197 -19 7 1065 266 315 0 22 chr13 62961776 62961958 -57322354 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 7 1065 707 234 216 22 chr13 62961990 62962221 -57322091 + B4A SINE B4 3 278 -14 7 1065 838 265 55 68 chr13 62962926 62963218 -57321094 + B4A SINE B4 4 291 -1 7 1065 297 0 0 0 chr13 62963261 62963294 -57321018 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 1065 288 256 110 8 chr13 62963335 62963453 -57320859 - MLT1D LTR MaLR -61 406 277 7 1065 1219 246 105 87 chr13 62963506 62963907 -57320405 + MT2A LTR ERVL 6 413 -120 7 1065 252 0 0 0 chr13 62963943 62963971 -57320341 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1065 340 319 39 89 chr13 62964002 62964205 -57320107 - MLT1D LTR MaLR -289 216 24 7 1065 362 219 0 0 chr13 62964997 62965061 -57319251 + B4 SINE B4 1 64 -228 7 1065 263 303 0 116 chr13 62965091 62965177 -57319135 + B4 SINE B4 213 288 -4 7 1065 21 0 0 0 chr13 62965196 62965217 -57319095 + GC_rich Low_complexity Low_complexity 1 21 0 7 1065 186 43 0 0 chr13 62965425 62965448 -57318864 + (GA)n Simple_repeat Simple_repeat 1 23 0 7 1065 217 267 37 56 chr13 62965917 62966024 -57318288 + MIR SINE MIR 39 143 -119 7 1065 1167 192 48 0 chr13 62966610 62966881 -57317431 - Lx LINE L1 -2 6652 6369 7 1065 189 0 0 0 chr13 62966930 62966951 -57317361 + (TC)n Simple_repeat Simple_repeat 1 21 0 7 1065 369 0 0 0 chr13 62967685 62967726 -57316586 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1065 414 0 0 0 chr13 62967734 62967780 -57316532 + (GA)n Simple_repeat Simple_repeat 2 47 0 7 1065 831 217 60 22 chr13 62967784 62967968 -57316344 + ID_B1 SINE B4 4 194 -30 7 1065 351 0 0 0 chr13 62967969 62968008 -57316304 + (GA)n Simple_repeat Simple_repeat 2 40 0 7 1065 275 45 45 0 chr13 62969480 62969524 -57314788 + (TCTG)n Simple_repeat Simple_repeat 1 46 0 7 1065 238 270 27 0 chr13 62969532 62969606 -57314706 + (TG)n Simple_repeat Simple_repeat 1 76 0 7 1065 337 312 128 12 chr13 62969632 62969875 -57314437 - B4A SINE B4 -18 274 4 7 1065 372 327 0 0 chr13 62970633 62970740 -57313572 + PB1D10 SINE Alu 2 108 -9 7 1065 477 277 85 0 chr13 62970740 62970881 -57313431 + Lx8 LINE L1 7143 7295 -178 7 1065 654 97 0 0 chr13 62970916 62971029 -57313283 + (TC)n Simple_repeat Simple_repeat 1 113 0 7 1065 225 0 0 0 chr13 62971197 62971222 -57313090 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 7 1065 347 214 147 0 chr13 62972362 62972439 -57311873 + B3 SINE B2 1 87 -111 7 1065 252 0 0 0 chr13 62972444 62972472 -57311840 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1065 774 176 28 7 chr13 62972763 62972906 -57311406 - URR1A DNA MER1_type 0 226 81 7 1065 219 103 0 0 chr13 62973513 62973552 -57310760 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 7 1065 254 95 24 0 chr13 62974248 62974290 -57310022 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 7 1065 239 370 119 13 chr13 62974307 62974466 -57309846 - L4 LINE RTE -174 1855 1680 8 1065 294 261 78 98 chr13 62974487 62974907 -57309405 + RLTR15 LTR ERVK 1 341 -18 8 1065 24 0 0 0 chr13 62974911 62974935 -57309377 + AT_rich Low_complexity Low_complexity 1 24 0 8 1065 328 262 39 39 chr13 62975132 62975259 -57309053 - RLTR15 LTR ERVK -191 168 42 8 1065 302 281 88 139 chr13 62976894 62977109 -57307203 - MER106B DNA MER1_type -3 1056 866 8 1065 544 263 204 6 chr13 62977619 62977795 -57306517 - ID_B1 SINE B4 -13 211 1 8 1065 387 0 0 0 chr13 62978369 62978412 -57305900 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1065 233 163 20 0 chr13 62978412 62978461 -57305851 + GA-rich Low_complexity Low_complexity 1 50 0 8 1065 293 316 80 46 chr13 62978998 62979153 -57305159 - L2b LINE L2 -10 3377 3189 8 1065 4556 179 58 4 chr13 62979856 62980693 -57303619 + Lx5 LINE L1 6168 7050 0 8 1065 188 265 36 109 chr13 62981590 62981700 -57302612 - L3 LINE CR1 -3646 843 742 8 1065 1067 75 0 8 chr13 62981948 62982082 -57302230 + B1_Mus2 SINE Alu 1 133 -14 8 1065 213 65 0 0 chr13 62982085 62982116 -57302196 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1065 1224 81 0 6 chr13 62982191 62982353 -57301959 + B2_Mm2 SINE B2 5 165 -30 8 1065 343 325 77 52 chr13 62982414 62982633 -57301679 + MIRm SINE MIR 6 223 -39 8 1065 221 338 0 13 chr13 62982745 62982823 -57301489 + MIRc SINE MIR 43 119 -149 8 1065 1328 93 5 20 chr13 62983339 62983536 -57300776 - B2_Mm2 SINE B2 0 195 2 8 1065 1456 249 155 33 chr13 62983778 62984352 -57299960 - Lx8 LINE L1 -3 7470 6827 8 1065 310 184 171 0 chr13 62984398 62984474 -57299838 - ID_B1 SINE B4 -9 215 127 8 1065 259 204 61 0 chr13 62984467 62984516 -57299796 - ID4_ SINE ID -31 52 1 8 1065 844 31 31 8 chr13 62984704 62984833 -57299479 + (GA)n Simple_repeat Simple_repeat 1 132 0 8 1065 991 284 7 37 chr13 62985312 62985612 -57298700 + B4 SINE B4 1 291 -1 8 1065 364 298 83 50 chr13 62985798 62985978 -57298334 - MIRc SINE MIR -71 197 12 8 1065 1650 21 0 16 chr13 62986425 62986616 -57297696 - B2_Mm1a SINE B2 -4 189 2 8 1065 228 131 115 0 chr13 62986633 62986694 -57297618 + (CATAT)n Simple_repeat Simple_repeat 3 70 0 8 1065 351 0 0 0 chr13 62987362 62987401 -57296911 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1065 650 175 24 32 chr13 62988335 62988459 -57295853 + B1_Mur2 SINE Alu 18 140 -9 8 1065 435 294 155 52 chr13 62990196 62990487 -57293825 - L2a LINE L2 -4 3422 3102 8 1065 454 305 13 31 chr13 62990487 62990646 -57293666 + B4 SINE B4 132 287 -5 8 1065 267 328 152 26 chr13 62990648 62990839 -57293473 - L2a LINE L2 -464 2955 2741 8 1065 355 324 62 100 chr13 62991138 62991378 -57292934 - LTR16A LTR ERVL -112 339 109 8 1065 724 237 12 73 chr13 62991791 62991955 -57292357 - RSINE1 SINE B4 -2 163 10 8 1065 4673 147 66 10 chr13 62992194 62992847 -57291465 + RLTR25A LTR ERVK 1 694 -409 8 1065 1505 64 16 0 chr13 62992847 62993035 -57291277 + B2_Mm2 SINE B2 1 191 -4 8 1065 4673 141 42 187 chr13 62993035 62993196 -57291116 + RLTR25A LTR ERVK 621 849 -254 8 1065 6665 68 5 14 chr13 62993196 62994069 -57290243 - L1_Mus3 LINE L1 -1 6637 5773 8 1065 4536 141 42 187 chr13 62994069 62994456 -57289856 + RLTR25B LTR ERVK 774 1028 0 8 1065 234 305 0 109 chr13 62994461 62994553 -57289759 + ID4_ SINE ID 2 83 0 8 1065 276 322 58 0 chr13 62994700 62994787 -57289525 + MIR SINE MIR 58 149 -59 8 1065 467 344 47 38 chr13 62994805 62995041 -57289271 - MIR SINE MIR -9 253 16 8 1065 281 192 164 0 chr13 62995773 62995846 -57288466 - MTD LTR MaLR 0 419 335 8 1065 365 290 50 0 chr13 62995844 62995944 -57288368 + B4A SINE B4 173 277 -15 8 1065 501 17 0 0 chr13 62995951 62996009 -57288303 + (TC)n Simple_repeat Simple_repeat 1 58 0 8 1065 363 60 0 0 chr13 62996009 62996058 -57288254 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 1065 1580 142 139 44 chr13 62996059 62996426 -57287886 + RMER17C LTR ERVK 1 402 -8 8 1065 200 35 35 0 chr13 62996426 62996455 -57287857 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1065 258 56 0 0 chr13 62996455 62996491 -57287821 + (TC)n Simple_repeat Simple_repeat 1 36 0 8 1065 27 49 0 0 chr13 62996495 62996536 -57287776 + AT_rich Low_complexity Low_complexity 1 41 0 8 1065 306 334 216 16 chr13 62996677 62997386 -57286926 + L2a LINE L2 1976 2826 -593 8 1065 417 301 14 29 chr13 62997403 62997537 -57286775 - PB1D10 SINE Alu -4 144 10 8 1065 280 366 0 56 chr13 62997448 62997555 -57286757 - ID_B1 SINE B4 -45 179 79 8 1065 276 298 47 47 chr13 62997839 62997966 -57286346 + L2a LINE L2 3294 3420 -6 8 1065 1158 90 0 0 chr13 62998319 62998464 -57285848 + B1_Mus1 SINE Alu 4 148 0 8 1065 230 364 65 41 chr13 62998489 62998612 -57285700 - LTR33 LTR ERVL -53 462 337 8 1065 1546 325 97 61 chr13 63000264 63000821 -57283491 + Lx8 LINE L1 5644 6195 -1501 1 1065 971 50 24 19 chr13 63000821 63001028 -57283284 + (TAGA)n Simple_repeat Simple_repeat 1 207 0 2 1065 2867 286 114 22 chr13 63001028 63002158 -57282154 + Lx8 LINE L1 6196 7473 0 1 1065 252 349 24 42 chr13 63002216 63002406 -57281906 - MLT2B2 LTR ERVL -306 214 27 3 1065 247 353 68 23 chr13 63002451 63002628 -57281684 + MLT1C LTR MaLR 283 467 0 4 1065 572 224 95 34 chr13 63003621 63003720 -57280592 - B3A SINE B2 -11 184 81 5 1065 186 43 0 0 chr13 63003720 63003743 -57280569 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 6 1065 495 0 0 0 chr13 63003743 63003798 -57280514 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 1065 572 223 91 18 chr13 63003798 63003857 -57280455 - B3A SINE B2 -110 85 25 5 1065 539 280 17 28 chr13 63003858 63004038 -57280274 - L1M5 LINE L1 -978 5466 5289 8 1065 516 258 129 0 chr13 63004093 63004248 -57280064 + MER2 DNA MER2_type 7 181 -164 9 1065 360 0 0 0 chr13 63004340 63004380 -57279932 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 1 1065 407 302 103 9 chr13 63004521 63004745 -57279567 - L1MC LINE L1 -1196 4950 4706 1 1065 780 163 0 0 chr13 63004764 63004899 -57279413 + B1_Mus1 SINE Alu 6 140 -8 1 1065 261 0 0 0 chr13 63004899 63004928 -57279384 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1065 276 304 65 17 chr13 63005161 63005279 -57279033 + B1F1 SINE Alu 23 146 -4 1 1065 24 32 0 0 chr13 63005553 63005584 -57278728 + AT_rich Low_complexity Low_complexity 1 31 0 1 1065 206 207 17 0 chr13 63005642 63005700 -57278612 + (TTA)n Simple_repeat Simple_repeat 2 60 0 1 1065 676 164 17 8 chr13 63005707 63005824 -57278488 - B1_Mur2 SINE Alu -20 129 12 1 1065 546 250 48 69 chr13 63006259 63006448 -57277864 + B4A SINE B4 102 286 -6 1 1065 251 231 187 0 chr13 63007034 63007125 -57277187 - MER58B DNA MER1_type -14 327 220 1 1065 330 87 0 0 chr13 63007667 63007713 -57276599 + (GA)n Simple_repeat Simple_repeat 2 47 0 2 1065 561 272 174 25 chr13 63007958 63008199 -57276113 + B4 SINE B4 6 282 -10 2 1065 678 165 0 14 chr13 63008293 63008419 -57275893 + B1_Mur3 SINE Alu 6 119 -1 2 1065 293 270 0 0 chr13 63010206 63010281 -57274031 - ID4_ SINE ID -58 94 20 2 1065 330 353 52 26 chr13 63010431 63010661 -57273651 + MIRb SINE MIR 31 266 -2 2 1065 832 202 116 25 chr13 63010831 63011029 -57273283 + ID_B1 SINE B4 3 218 -6 2 1065 235 294 129 119 chr13 63011669 63011862 -57272450 + B4 SINE B4 97 291 -1 2 1065 357 226 174 49 chr13 63011912 63012056 -57272256 - MER5A1 DNA MER1_type -4 162 1 2 1065 1210 255 75 16 chr13 63012415 63012814 -57271498 + L1MA4 LINE L1 5542 5964 -192 2 1065 396 0 0 0 chr13 63012814 63012858 -57271454 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1065 824 315 22 6 chr13 63012858 63012902 -57271410 + L1MA4 LINE L1 5965 6011 -145 2 1065 26 74 0 0 chr13 63012908 63012962 -57271350 + AT_rich Low_complexity Low_complexity 1 54 0 3 1065 364 164 45 0 chr13 63013500 63013567 -57270745 - B3A SINE B2 -128 70 1 3 1065 407 286 43 18 chr13 63013576 63013740 -57270572 + L1M4 LINE L1 4182 4349 -1797 3 1065 405 0 0 0 chr13 63013740 63013785 -57270527 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1065 978 218 45 103 chr13 63014355 63014647 -57269665 + B4 SINE B4 16 290 -2 3 1065 757 196 46 6 chr13 63015273 63015447 -57268865 - MER5A DNA MER1_type -3 186 6 3 1065 335 309 47 29 chr13 63015660 63015830 -57268482 + MIR SINE MIR 47 219 -43 3 1065 189 0 0 0 chr13 63016021 63016042 -57268270 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1065 315 0 0 0 chr13 63016042 63016076 -57268236 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1065 405 340 134 12 chr13 63016126 63016379 -57267933 - LTR31 LTR ERV1 -120 499 216 3 1065 710 164 29 22 chr13 63016415 63016552 -57267760 + ORR1E LTR MaLR 6 143 -216 4 1065 200 184 20 0 chr13 63016558 63016607 -57267705 + CT-rich Low_complexity Low_complexity 4 53 0 4 1065 1311 292 21 111 chr13 63016638 63016805 -57267507 + Lx9 LINE L1 6868 7036 -608 4 1065 2382 156 60 8 chr13 63016805 63017205 -57267107 - MTC LTR MaLR 0 421 1 4 1065 1311 292 21 111 chr13 63017205 63017688 -57266624 + Lx9 LINE L1 7037 7460 -184 4 1065 2863 152 57 72 chr13 63017739 63018548 -57265764 + RMER19B LTR ERVK 1 886 -16 4 1065 1353 77 38 6 chr13 63018548 63018731 -57265581 + B2_Mm2 SINE B2 2 190 -5 4 1065 27 0 0 0 chr13 63018843 63018870 -57265442 + AT_rich Low_complexity Low_complexity 1 27 0 4 1065 543 254 16 0 chr13 63018871 63018997 -57265315 + B3 SINE B2 27 154 -62 4 1065 281 318 25 8 chr13 63019292 63019428 -57264884 + LTR16D1 LTR ERVL 435 675 0 4 1065 231 314 133 0 chr13 63019948 63020053 -57264259 + Charlie25 DNA MER1_type 1019 1137 -1387 4 1065 6585 32 1 4 chr13 63020328 63021099 -57263213 + L1Md_F2 LINE L1 5814 6582 0 5 1065 418 386 43 31 chr13 63021382 63021732 -57262580 + Charlie25 DNA MER1_type 1650 2003 -521 4 1065 510 227 92 0 chr13 63021771 63021890 -57262422 + B1F2 SINE Alu 14 143 -6 5 1065 243 0 0 0 chr13 63022943 63022970 -57261342 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1065 1046 222 9 23 chr13 63022977 63023194 -57261118 + B3 SINE B2 1 214 -2 5 1065 432 0 0 0 chr13 63023355 63023403 -57260909 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1065 568 250 34 20 chr13 63023693 63023840 -57260472 - B1_Mur3 SINE Alu 0 149 1 5 1065 240 151 0 36 chr13 63023898 63023953 -57260359 - B1F SINE Alu -1 148 96 5 1065 253 145 58 0 chr13 63024328 63024397 -57259915 + (CA)n Simple_repeat Simple_repeat 2 74 0 5 1065 470 150 26 19 chr13 63024411 63024567 -57259745 + (CA)n Simple_repeat Simple_repeat 2 158 0 5 1065 644 265 64 79 chr13 63026026 63026292 -57258020 - B4A SINE B4 0 292 31 5 1065 296 289 131 70 chr13 63027116 63027423 -57256889 + MLT1C LTR MaLR 45 434 -33 5 1065 827 284 27 5 chr13 63027593 63027812 -57256500 + ID_B1 SINE B4 1 224 0 6 1065 426 20 0 0 chr13 63028139 63028190 -57256122 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1065 333 337 41 18 chr13 63028793 63028962 -57255350 - MER5A DNA MER1_type -1 188 16 6 1065 615 190 174 3 chr13 63029121 63029305 -57255007 - B3A SINE B2 0 216 1 6 1065 472 299 20 58 chr13 63029590 63029866 -57254446 - MLT1A1 LTR MaLR -26 382 86 6 1065 291 54 0 0 chr13 63030756 63030793 -57253519 + (T)n Simple_repeat Simple_repeat 1 37 0 6 1065 1209 55 0 0 chr13 63030793 63030939 -57253373 - B1_Mus2 SINE Alu 0 147 2 6 1065 258 256 0 0 chr13 63030953 63031017 -57253295 - B1F2 SINE Alu -49 68 5 6 1065 188 67 0 32 chr13 63032046 63032077 -57252235 + (TCTCC)n Simple_repeat Simple_repeat 5 34 0 6 1065 857 310 135 3 chr13 63032237 63032586 -57251726 + Lx8 LINE L1 6920 7314 -159 6 1065 513 68 0 0 chr13 63032592 63032666 -57251646 + (TC)n Simple_repeat Simple_repeat 2 75 0 7 1065 180 0 0 0 chr13 63032666 63032686 -57251626 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 1065 553 216 80 25 chr13 63032856 63033024 -57251288 + B3 SINE B2 5 181 -14 7 1065 298 219 138 72 chr13 63033042 63033180 -57251132 + B1F1 SINE Alu 1 147 -2 7 1065 626 256 32 30 chr13 63033580 63033771 -57250541 + B3A SINE B2 1 186 -7 7 1065 831 249 148 4 chr13 63033964 63034214 -57250098 + B4 SINE B4 1 286 -6 7 1065 1222 54 0 0 chr13 63034250 63034397 -57249915 + B1_Mm SINE Alu 1 147 0 7 1065 727 278 84 19 chr13 63034540 63034753 -57249559 - B4A SINE B4 -16 276 50 7 1065 446 17 0 33 chr13 63035840 63035900 -57248412 + (TCCCC)n Simple_repeat Simple_repeat 4 61 0 7 1065 709 122 0 0 chr13 63035906 63036013 -57248299 - B1_Mus2 SINE Alu -40 107 1 7 1065 267 152 0 0 chr13 63036026 63036072 -57248240 + CT-rich Low_complexity Low_complexity 2 47 0 8 1065 359 217 113 32 chr13 63036266 63036363 -57247949 + PB1D10 SINE Alu 2 105 -22 8 1065 505 323 30 24 chr13 63036508 63036676 -57247636 - B4 SINE B4 -123 169 1 8 1065 723 247 50 154 chr13 63037285 63037701 -57246611 + MLT1B LTR MaLR 16 388 -2 8 1065 296 337 152 54 chr13 63037839 63038134 -57246178 - MLT1H1 LTR MaLR -219 336 13 8 1065 693 264 32 127 chr13 63038368 63038620 -57245692 + B4 SINE B4 2 229 -63 8 1065 237 268 0 104 chr13 63038672 63038768 -57245544 + B4A SINE B4 207 292 0 8 1065 248 203 17 17 chr13 63038988 63039048 -57245264 - MER58D DNA MER1_type -40 346 287 8 1065 984 260 14 54 chr13 63039283 63039560 -57244752 + B4 SINE B4 27 292 0 8 1065 229 196 0 21 chr13 63039583 63039630 -57244682 + G-rich Low_complexity Low_complexity 3 48 0 8 1065 441 278 147 7 chr13 63040289 63040563 -57243749 - L1ME2 LINE L1 -37 6127 5816 8 1065 1595 147 115 18 chr13 63041521 63041860 -57242452 + RLTR11A LTR ERVK 1 372 -156 9 1065 259 261 11 54 chr13 63041857 63041950 -57242362 + B1F SINE Alu 53 141 -8 9 1065 309 26 0 0 chr13 63042442 63042480 -57241832 + (CAAA)n Simple_repeat Simple_repeat 4 41 0 9 1065 3318 112 8 10 chr13 63043480 63043965 -57240347 - Lx4A LINE L1 -1 7057 6574 9 1065 1291 208 17 47 chr13 63043986 63044284 -57240028 + Lx6 LINE L1 7146 7434 -26 9 1065 351 0 0 0 chr13 63044361 63044400 -57239912 + (TC)n Simple_repeat Simple_repeat 2 40 0 9 1065 23 33 0 0 chr13 63044549 63044579 -57239733 + AT_rich Low_complexity Low_complexity 1 30 0 9 1065 324 250 53 38 chr13 63044579 63044712 -57239600 - L1MA10 LINE L1 -7 6327 6193 9 1065 355 320 58 24 chr13 63044759 63044967 -57239345 - MLT1K LTR MaLR 0 595 381 9 1066 714 230 144 86 chr13 63047102 63047359 -57236953 - B4 SINE B4 -1 291 20 9 1066 183 28 83 0 chr13 63047360 63047396 -57236916 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1 1066 255 293 122 0 chr13 63047397 63047479 -57236833 - PB1D7 SINE Alu -21 99 8 1 1066 283 329 37 0 chr13 63047412 63047494 -57236818 - ID_B1 SINE B4 -63 161 77 1 1066 1716 152 17 67 chr13 63047603 63047948 -57236364 - ORR1A4 LTR MaLR -1 328 1 1 1066 564 302 51 25 chr13 63048053 63048250 -57236062 - B3 SINE B2 -13 203 2 1 1066 524 327 69 31 chr13 63048399 63048718 -57235594 + MER2B DNA MER2_type 5 335 -1 1 1066 316 244 122 0 chr13 63048819 63048901 -57235411 - ORR1E LTR MaLR -267 92 1 1 1066 1066 239 85 61 chr13 63048902 63049277 -57235035 + L1_Rod LINE L1 5250 5633 -214 1 1066 1860 165 62 11 chr13 63049299 63049673 -57234639 + Lx9 LINE L1 7252 7644 0 1 1066 1095 207 283 7 chr13 63049776 63050073 -57234239 - MTE2b LTR MaLR 0 379 1 1 1066 346 175 0 0 chr13 63050073 63050136 -57234176 + MT2A LTR ERVL 4 66 -467 1 1066 381 301 19 10 chr13 63050230 63050334 -57233978 + PB1D10 SINE Alu 1 105 -12 1 1066 527 181 14 20 chr13 63050342 63050489 -57233823 + CT-rich Low_complexity Low_complexity 3 148 0 1 1066 228 330 30 0 chr13 63050490 63050590 -57233722 - PB1D10 SINE Alu -14 103 1 1 1066 203 298 18 0 chr13 63050812 63050869 -57233443 - MIRm SINE MIR -176 100 43 1 1066 372 297 54 0 chr13 63051878 63051989 -57232323 - B4 SINE B4 -76 216 100 1 1066 958 195 105 5 chr13 63052273 63052464 -57231848 + B3 SINE B2 1 210 -6 1 1066 180 0 0 0 chr13 63052479 63052499 -57231813 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1 1066 1147 86 0 6 chr13 63052500 63052663 -57231649 - B2_Mm2 SINE B2 -33 162 1 1 1066 241 270 120 0 chr13 63052758 63052788 -57231524 - BC1_Mm scRNA scRNA -39 113 2 1 1066 292 171 186 0 chr13 63052788 63052858 -57231454 - ID SINE ID -140 84 2 1 1066 346 217 24 0 chr13 63053091 63053174 -57231138 + B4 SINE B4 100 184 -108 1 1066 397 260 220 6 chr13 63053329 63053511 -57230801 - RMER21B LTR ERV1 -275 567 347 1 1066 294 298 0 9 chr13 63053551 63053656 -57230656 - RMER21B LTR ERV1 -660 182 79 1 1066 470 290 58 51 chr13 63053827 63054121 -57230191 + L1MC5 LINE L1 7647 7942 -19 1 1066 855 245 96 123 chr13 63054383 63054913 -57229399 + RMER21B LTR ERV1 52 567 -275 1 1066 231 279 0 14 chr13 63055109 63055178 -57229134 - MER53 DNA hAT 0 193 126 1 1066 734 174 0 57 chr13 63055943 63056083 -57228229 + B1_Mus2 SINE Alu 9 140 -7 1 1066 402 314 7 62 chr13 63056284 63056430 -57227882 + RSINE1 SINE B4 2 139 -26 1 1066 315 0 0 0 chr13 63056445 63056480 -57227832 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1066 654 105 0 0 chr13 63056480 63056594 -57227718 + (GA)n Simple_repeat Simple_repeat 1 114 0 1 1066 236 218 66 44 chr13 63056660 63056751 -57227561 + L1M LINE L1 5262 5354 -825 1 1066 375 23 0 0 chr13 63056778 63056822 -57227490 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1066 235 226 45 61 chr13 63056823 63056889 -57227423 - RSINE1 SINE B4 -97 68 4 1 1066 180 0 0 0 chr13 63057297 63057317 -57226995 + (GA)n Simple_repeat Simple_repeat 1 20 0 1 1066 627 161 113 0 chr13 63057656 63057780 -57226532 + URR1B DNA MER1_type 88 225 0 1 1066 476 257 78 136 chr13 63058189 63058585 -57225727 - MLT1A1 LTR MaLR -7 401 29 1 1066 267 336 73 76 chr13 63059400 63059717 -57224595 - LTR16E2 LTR ERVL -56 512 184 1 1066 601 288 146 13 chr13 63060978 63061217 -57223095 + B4A SINE B4 2 272 -20 1 1066 234 0 0 0 chr13 63061270 63061296 -57223016 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1066 399 330 47 73 chr13 63062159 63062391 -57221921 + Charlie12 DNA MER1_type 2113 2338 -535 1 1066 273 275 0 12 chr13 63062421 63062502 -57221810 + Charlie12 DNA MER1_type 2417 2496 -377 1 1066 240 111 0 0 chr13 63062508 63062544 -57221768 + (TGG)n Simple_repeat Simple_repeat 1 36 0 1 1066 499 280 137 20 chr13 63062604 63062808 -57221504 - B4A SINE B4 -63 229 2 1 1066 595 231 23 51 chr13 63062808 63063022 -57221290 + Charlie12 DNA MER1_type 2486 2693 -180 1 1066 295 237 151 0 chr13 63063437 63063530 -57220782 - B1_Mur1 SINE Alu -1 148 42 1 1066 470 287 132 42 chr13 63064479 63064646 -57219666 + B3A SINE B2 1 182 -16 1 1066 288 0 0 0 chr13 63064913 63064945 -57219367 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1066 528 213 0 27 chr13 63065565 63065676 -57218636 + B3 SINE B2 14 121 -95 1 1066 626 144 27 0 chr13 63065956 63066067 -57218245 + B1_Mus2 SINE Alu 34 147 0 1 1066 255 365 39 24 chr13 63066838 63067046 -57217266 - MIRb SINE MIR -38 230 20 1 1066 760 286 74 56 chr13 63067178 63067448 -57216864 - B4 SINE B4 -1 291 17 1 1066 513 0 0 0 chr13 63067475 63067532 -57216780 + (TTC)n Simple_repeat Simple_repeat 2 58 0 1 1066 1214 96 0 43 chr13 63067532 63067717 -57216595 - B2_Mm2 SINE B2 -17 178 2 1 1066 198 209 0 0 chr13 63067821 63067864 -57216448 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1066 279 0 0 0 chr13 63067864 63067895 -57216417 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1066 180 0 0 0 chr13 63068191 63068211 -57216101 + (C)n Simple_repeat Simple_repeat 1 20 0 1 1066 258 364 41 27 chr13 63070185 63070332 -57213980 + MIR SINE MIR 46 194 -68 1 1066 774 181 36 0 chr13 63070640 63070778 -57213534 + B1_Mus1 SINE Alu 1 143 -5 1 1066 462 239 43 34 chr13 63070862 63070979 -57213333 - RSINE1 SINE B4 -44 121 4 1 1066 312 290 140 0 chr13 63071213 63071313 -57212999 + PB1D10 SINE Alu 4 117 0 1 1066 576 344 55 18 chr13 63071576 63071902 -57212410 - L1MB4 LINE L1 -65 6115 5778 1 1066 259 403 7 27 chr13 63072172 63072320 -57211992 - MIR SINE MIR -92 170 26 1 1066 236 53 26 0 chr13 63072850 63072888 -57211424 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 1 1066 237 267 0 0 chr13 63073970 63074030 -57210282 + ID2 SINE ID 16 75 -8 1 1066 662 197 30 0 chr13 63074455 63074587 -57209725 + RSINE1 SINE B4 6 141 -24 1 1066 329 286 51 51 chr13 63074699 63074817 -57209495 - MER20 DNA MER1_type -62 157 40 1 1066 13076 133 24 19 chr13 63075165 63078283 -57206029 - Lx4B LINE L1 -6 6994 3848 1 1066 583 149 0 0 chr13 63078285 63078379 -57205933 + B1_Mur4 SINE Alu 8 101 -49 1 1066 1143 95 0 0 chr13 63078385 63078532 -57205780 - B1_Mus2 SINE Alu 0 147 1 1 1066 595 208 230 34 chr13 63078566 63078775 -57205537 + MTD LTR MaLR 147 396 -23 1 1066 948 237 5 5 chr13 63078967 63079166 -57205146 + B3 SINE B2 3 201 -15 1 1066 572 256 104 32 chr13 63080301 63080551 -57203761 - B4 SINE B4 -22 270 3 1 1066 698 293 88 54 chr13 63081122 63081439 -57202873 - Lx8 LINE L1 -15 7458 7131 1 1066 597 242 39 0 chr13 63082500 63082628 -57201684 - B1F SINE Alu -12 137 5 1 1066 1420 86 0 5 chr13 63082845 63083033 -57201279 + B2_Mm2 SINE B2 2 188 -7 1 1066 693 246 64 6 chr13 63083210 63083382 -57200930 - B3A SINE B2 -16 182 1 1 1066 216 184 0 0 chr13 63083492 63083541 -57200771 + C-rich Low_complexity Low_complexity 4 52 0 1 1066 725 160 88 0 chr13 63083548 63083673 -57200639 - B1_Mur3 SINE Alu -13 136 1 1 1066 799 291 77 14 chr13 63083911 63084277 -57200035 - L1MB7 LINE L1 -72 6112 5724 1 1066 396 301 28 4 chr13 63086205 63086331 -57197981 + PB1D10 SINE Alu 2 127 -22 1 1066 579 244 30 0 chr13 63086329 63086464 -57197848 + ID_B1 SINE B4 20 158 -66 1 1066 317 219 60 12 chr13 63086394 63086477 -57197835 + PB1D10 SINE Alu 6 92 -25 1 1066 329 333 67 0 chr13 63086491 63086641 -57197671 + MIR SINE MIR 74 233 -29 1 1066 288 186 42 14 chr13 63087003 63087074 -57197238 + RSINE1 SINE B4 45 117 -48 1 1066 465 157 32 80 chr13 63087965 63088090 -57196222 - RMER12 LTR ERVK -107 1215 1097 1 1066 9517 115 6 6 chr13 63088094 63088656 -57195656 + L1VL4 LINE L1 529 1090 -2469 1 1066 3917 64 0 4 chr13 63088656 63089141 -57195171 + L1_Mus1 LINE L1 6085 6567 0 1 1066 9517 84 13 14 chr13 63089141 63090308 -57194004 + L1VL4 LINE L1 1091 2256 -1303 1 1066 4696 59 45 13 chr13 63090308 63090928 -57193384 + L1_Mus2 LINE L1 5927 6566 0 1 1066 305 314 89 77 chr13 63090936 63091067 -57193245 - RMER12 LTR ERVK -224 1098 978 1 1066 204 40 0 0 chr13 63091067 63091092 -57193220 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1066 608 238 35 40 chr13 63091092 63091284 -57193028 - RMER12 LTR ERVK -345 977 771 1 1066 2570 133 57 45 chr13 63091773 63092286 -57192026 + RMER19B LTR ERVK 3 521 -381 1 1066 1598 91 8 0 chr13 63092279 63092521 -57191791 + RMER12 LTR ERVK 519 762 -560 1 1066 2060 136 54 0 chr13 63092527 63092879 -57191433 + RMER19B LTR ERVK 532 902 0 1 1066 5005 99 23 8 chr13 63092926 63092937 -57191375 - RMER12 LTR ERVK -535 787 777 1 1066 366 23 0 0 chr13 63092937 63092980 -57191332 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1066 5005 99 23 8 chr13 63092980 63093742 -57190570 - RMER12 LTR ERVK -546 776 3 1 1066 1713 66 0 17 chr13 63093861 63094091 -57190221 - L1_Mus1 LINE L1 0 6567 6342 1 1066 24 32 0 0 chr13 63094214 63094245 -57190067 + AT_rich Low_complexity Low_complexity 1 31 0 1 1066 286 282 35 12 chr13 63096018 63096190 -57188122 - L1MEa LINE L1 -4858 1342 1167 1 1066 256 252 56 37 chr13 63096190 63096297 -57188015 - PB1D10 SINE Alu 0 117 9 1 1066 286 245 24 12 chr13 63096309 63096411 -57187901 - L1MD3 LINE L1 -19 7976 7896 1 1066 259 302 92 8 chr13 63097208 63097338 -57186974 - L1MD3 LINE L1 -455 7540 7400 1 1066 321 304 52 82 chr13 63097385 63097715 -57186597 - L1MD3 LINE L1 -954 7041 6722 1 1066 291 227 80 74 chr13 63097824 63098000 -57186312 - L1MEa LINE L1 -5150 1050 874 1 1066 297 286 130 75 chr13 63098469 63098878 -57185434 - L1MEa LINE L1 -5235 859 434 1 1066 325 260 151 24 chr13 63098878 63099004 -57185308 + B1_Mur1 SINE Alu 1 142 -7 1 1066 297 286 130 75 chr13 63099004 63099156 -57185156 - L1MEa LINE L1 -5661 433 267 1 1066 452 318 64 12 chr13 63100119 63100291 -57184021 + B3A SINE B2 2 182 -16 1 1066 2595 154 27 0 chr13 63100308 63100716 -57183596 - MTC LTR MaLR 0 421 3 1 1066 258 316 5 29 chr13 63100807 63100902 -57183410 - PB1D9 SINE Alu -66 54 3 1 1066 22931 62 12 5 chr13 63101084 63104940 -57179372 - L1Md_Gf LINE L1 -1600 4286 304 1 1066 1245 112 45 5 chr13 63104941 63105139 -57179173 - L1_Mur3 LINE L1 -380 5500 5295 2 1066 730 106 15 68 chr13 63105164 63105296 -57179016 - ORR1A4 LTR MaLR -57 272 148 2 1066 1116 53 0 0 chr13 63105328 63105478 -57178834 - B2_Mm2 SINE B2 -44 151 2 2 1066 2463 140 43 2 chr13 63105478 63105892 -57178420 - L1_Mur3 LINE L1 -638 5242 4812 2 1066 2220 135 24 13 chr13 63105896 63106278 -57178034 - ORR1B1 LTR MaLR 0 394 9 2 1066 12412 140 65 32 chr13 63106278 63108574 -57175738 - L1_Mur3 LINE L1 -1082 4798 2427 2 1066 756 182 7 20 chr13 63108574 63108725 -57175587 + B1_Mur4 SINE Alu 2 150 0 2 1066 12412 140 65 32 chr13 63108725 63108880 -57175432 - L1_Mur3 LINE L1 -1082 2426 2265 2 1066 3560 75 10 47 chr13 63108880 63109386 -57174926 + L1_Mus3 LINE L1 6145 6631 -7 2 1066 9710 201 61 96 chr13 63109386 63109634 -57174678 - L1_Mur3 LINE L1 -3613 2273 2049 2 1066 324 0 0 0 chr13 63109634 63109670 -57174642 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1066 271 321 64 70 chr13 63109676 63109916 -57174396 - RSINE1 SINE B4 -16 276 48 2 1066 7962 228 76 139 chr13 63109916 63110630 -57173682 - L1_Mur3 LINE L1 -3838 2042 1237 2 1066 417 39 0 0 chr13 63110639 63110690 -57173622 + (TCCC)n Simple_repeat Simple_repeat 1 51 0 2 1066 536 42 0 14 chr13 63110690 63110761 -57173551 + (TTTC)n Simple_repeat Simple_repeat 3 73 0 2 1066 2348 166 22 5 chr13 63110774 63111221 -57173091 - L1_Mur3 LINE L1 -6464 1248 794 2 1066 868 180 17 11 chr13 63111225 63111405 -57172907 - L1_Mur3 LINE L1 -7492 220 40 2 1066 473 0 18 0 chr13 63112477 63112534 -57171778 + (GA)n Simple_repeat Simple_repeat 2 59 0 2 1066 513 0 0 0 chr13 63112534 63112591 -57171721 + (GGAA)n Simple_repeat Simple_repeat 4 60 0 2 1066 312 208 21 10 chr13 63112606 63112703 -57171609 + GA-rich Low_complexity Low_complexity 3 100 0 2 1066 521 256 48 68 chr13 63114418 63114565 -57169747 + B1F SINE Alu 6 149 0 2 1066 370 294 2 9 chr13 63114857 63114968 -57169344 + B1F2 SINE Alu 1 108 -41 2 1066 360 288 17 35 chr13 63118935 63119050 -57165262 + PB1D7 SINE Alu 2 114 -6 2 1066 359 274 230 40 chr13 63119500 63119731 -57164581 - B4A SINE B4 -10 282 8 2 1066 268 256 46 11 chr13 63119947 63120034 -57164278 + L1MC3 LINE L1 6295 6384 -1401 2 1066 289 235 65 84 chr13 63120417 63120502 -57163810 + L1MC3 LINE L1 7439 7523 -262 2 1066 441 248 0 35 chr13 63120502 63120615 -57163697 + PB1D10 SINE Alu 4 112 -5 2 1066 289 235 65 84 chr13 63120615 63120636 -57163676 + L1MC3 LINE L1 7524 7543 -242 2 1066 22253 22 0 0 chr13 63120671 63123869 -57160443 - L1Md_T LINE L1 -1 6581 3384 2 1066 562 267 95 51 chr13 63125309 63125605 -57158707 - Lx8 LINE L1 -60 7413 7105 2 1066 180 0 0 0 chr13 63125706 63125726 -57158586 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 1066 4000 265 73 92 chr13 63125726 63128092 -57156220 - Lx8 LINE L1 -281 7415 5086 2 1066 387 301 0 11 chr13 63128117 63128229 -57156083 + PB1D9 SINE Alu 3 112 -8 2 1066 241 320 9 112 chr13 63128131 63128247 -57156065 + MT2B LTR ERVL 180 283 -318 2 1066 380 191 202 0 chr13 63128256 63128350 -57155962 - PB1D9 SINE Alu -7 113 1 2 1066 1215 74 0 0 chr13 63128359 63128522 -57155790 + (GAAA)n Simple_repeat Simple_repeat 3 165 0 2 1066 210 208 0 0 chr13 63128572 63128620 -57155692 + GA-rich Low_complexity Low_complexity 6 53 0 2 1066 190 318 100 8 chr13 63128706 63128836 -57155476 + MIR3 SINE MIR 49 190 -18 2 1066 535 212 16 41 chr13 63130422 63130545 -57153767 + PB1D7 SINE Alu 1 120 0 2 1066 198 0 0 0 chr13 63130546 63130568 -57153744 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2 1066 216 230 189 0 chr13 63130838 63130912 -57153400 + PB1D7 SINE Alu 24 111 -9 2 1066 417 245 64 0 chr13 63131108 63131202 -57153110 - ID_B1 SINE B4 -34 190 91 2 1066 298 307 34 11 chr13 63131122 63131211 -57153101 - PB1D10 SINE Alu -25 92 2 2 1066 404 242 161 0 chr13 63131318 63131442 -57152870 + B1F SINE Alu 1 144 -5 2 1066 531 273 133 0 chr13 63131629 63131794 -57152518 + B4 SINE B4 51 237 -55 2 1066 279 357 0 45 chr13 63132742 63132874 -57151438 - ID_B1 SINE B4 -18 206 81 2 1066 396 284 185 8 chr13 63133131 63133369 -57150943 + LTR33A_ LTR ERVL 244 523 -8 2 1066 243 0 0 0 chr13 63134132 63134159 -57150153 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1066 1184 102 97 0 chr13 63135703 63135879 -57148433 - B2_Mm2 SINE B2 -2 193 1 2 1066 2141 262 145 14 chr13 63135972 63136681 -57147631 - Lx8 LINE L1 -5 7468 6667 2 1066 186 71 0 0 chr13 63136689 63136717 -57147595 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1066 6500 135 24 18 chr13 63136723 63137973 -57146339 - Lx LINE L1 -8 6646 5387 2 1066 350 286 11 0 chr13 63137965 63138056 -57146256 - Lx8 LINE L1 -797 6676 6585 2 1066 708 205 0 0 chr13 63138065 63138216 -57146096 + (CATA)n Simple_repeat Simple_repeat 1 151 0 2 1066 2317 263 76 31 chr13 63138219 63139024 -57145288 - Lx8 LINE L1 -1508 6188 5323 2 1066 687 25 0 0 chr13 63139024 63139105 -57145207 + (TCTCCC)n Simple_repeat Simple_repeat 5 85 0 2 1066 2317 260 70 31 chr13 63139105 63139350 -57144962 - Lx8 LINE L1 -558 5322 5075 2 1066 258 200 53 13 chr13 63139923 63139999 -57144313 - B1F2 SINE Alu -69 80 2 2 1066 488 342 53 14 chr13 63140113 63140395 -57143917 - L1M6 LINE L1 -616 5802 5510 2 1066 390 303 183 26 chr13 63140664 63141091 -57143221 - L1M6 LINE L1 -5442 1054 561 2 1066 968 200 38 28 chr13 63141255 63141466 -57142846 - B3 SINE B2 -2 214 2 2 1066 497 155 15 15 chr13 63141755 63141886 -57142426 + (TG)n Simple_repeat Simple_repeat 1 131 0 2 1066 368 210 0 25 chr13 63141978 63142139 -57142173 + (TG)n Simple_repeat Simple_repeat 2 158 0 2 1066 30 27 0 0 chr13 63142154 63142191 -57142121 + AT_rich Low_complexity Low_complexity 1 37 0 2 1066 3539 245 143 51 chr13 63142289 63142726 -57141586 - Lx9 LINE L1 -182 7462 7035 2 1066 946 17 17 0 chr13 63142726 63142846 -57141466 + (TTTC)n Simple_repeat Simple_repeat 4 125 0 2 1066 3539 245 143 51 chr13 63142846 63142863 -57141449 - Lx9 LINE L1 -610 7034 7034 2 1066 2270 59 39 16 chr13 63142863 63143174 -57141138 - L1_Mus1 LINE L1 0 6567 6250 2 1066 3539 245 143 51 chr13 63143174 63143546 -57140766 - Lx9 LINE L1 -610 7034 6614 2 1066 1145 82 0 14 chr13 63143546 63143694 -57140618 + B1_Mus2 SINE Alu 2 147 0 2 1066 3539 245 143 51 chr13 63143694 63144062 -57140250 - Lx9 LINE L1 -1031 6613 6156 2 1066 470 258 25 123 chr13 63144119 63144322 -57139990 - B4A SINE B4 -46 246 64 2 1066 1734 21 0 0 chr13 63144654 63144845 -57139467 + B2_Mm1t SINE B2 1 191 -2 2 1066 796 103 34 11 chr13 63144906 63145082 -57139230 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 2 1066 285 109 31 15 chr13 63145088 63145153 -57139159 + GA-rich Low_complexity Low_complexity 4 69 0 2 1066 865 91 22 28 chr13 63145161 63145342 -57138970 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 2 1066 264 268 28 0 chr13 63145546 63145617 -57138695 + MER58A DNA MER1_type 1 73 -151 2 1066 252 274 0 0 chr13 63145789 63145851 -57138461 + PB1D10 SINE Alu 38 99 -18 2 1066 756 207 28 18 chr13 63146966 63147166 -57137146 - B3A SINE B2 0 195 1 2 1066 615 305 23 28 chr13 63148976 63149192 -57135120 - ID_B1 SINE B4 -1 223 9 2 1066 269 271 181 28 chr13 63150657 63150839 -57133473 - MIRb SINE MIR -30 238 29 2 1066 28042 129 19 6 chr13 63151400 63153828 -57130484 + Lx LINE L1 434 2913 -2970 2 1066 1407 95 5 0 chr13 63153828 63154018 -57130294 + B2_Mm1a SINE B2 1 191 -2 2 1066 28042 130 19 10 chr13 63154018 63157740 -57126572 + Lx LINE L1 2914 6654 0 2 1066 25 83 0 0 chr13 63158280 63158340 -57125972 + AT_rich Low_complexity Low_complexity 1 60 0 2 1066 1435 254 85 55 chr13 63158470 63159037 -57125275 - RLTR31A_Mm LTR ERVK 0 584 1 2 1066 300 222 42 53 chr13 63159037 63159132 -57125180 + PB1D7 SINE Alu 27 120 0 2 1066 5093 60 2 6 chr13 63159218 63159857 -57124455 - L1_Mus1 LINE L1 0 6567 5932 2 1066 258 229 35 165 chr13 63160245 63160360 -57123952 - HAL1 LINE L1 -783 1724 1625 2 1066 428 299 8 16 chr13 63161003 63161132 -57123180 - ID_B1 SINE B4 0 224 97 2 1066 815 215 31 0 chr13 63161332 63161495 -57122817 + B3A SINE B2 6 173 -25 2 1066 201 316 26 13 chr13 63161883 63161960 -57122352 - MIRc SINE MIR -179 89 12 2 1066 22 0 0 0 chr13 63161974 63161996 -57122316 + AT_rich Low_complexity Low_complexity 1 22 0 2 1066 183 80 0 0 chr13 63163055 63163080 -57121232 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1066 807 263 43 5 chr13 63163178 63163388 -57120924 + ID_B1 SINE B4 3 220 -4 2 1066 225 372 83 30 chr13 63163673 63163939 -57120373 + MLT1I LTR MaLR 124 403 -8 2 1066 528 276 24 0 chr13 63164290 63164417 -57119895 + RSINE1 SINE B4 2 131 -34 2 1066 180 0 0 0 chr13 63164429 63164449 -57119863 + (TC)n Simple_repeat Simple_repeat 1 20 0 2 1066 633 27 0 0 chr13 63164449 63164523 -57119789 + (CA)n Simple_repeat Simple_repeat 1 75 0 2 1066 1441 70 38 0 chr13 63164642 63164828 -57119484 - B2_Mm2 SINE B2 -1 194 2 2 1066 366 23 0 0 chr13 63165774 63165817 -57118495 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1066 1104 84 7 0 chr13 63165845 63165988 -57118324 - B1_Mus1 SINE Alu -4 144 1 2 1066 209 264 95 42 chr13 63166227 63166322 -57117990 + L3b LINE CR1 33 132 -350 2 1066 489 242 56 8 chr13 63167188 63167313 -57116999 - B1F SINE Alu 0 149 19 2 1066 391 264 33 0 chr13 63167364 63167455 -57116857 - PB1D10 SINE Alu -8 109 16 2 1066 1107 200 54 0 chr13 63168290 63168495 -57115817 + ID_B1 SINE B4 1 216 -8 2 1066 500 263 44 2 chr13 63168703 63168838 -57115474 + ID_B1 SINE B4 86 220 -4 2 1066 1556 58 5 0 chr13 63169150 63169340 -57114972 - B2_Mm1t SINE B2 -2 191 1 2 1066 481 305 66 31 chr13 63169823 63170050 -57114262 + MamSINE1 SINE tRNA 12 246 -44 2 1066 404 67 0 16 chr13 63170513 63170574 -57113738 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1066 1124 88 0 0 chr13 63172905 63173052 -57111260 - B1_Mus2 SINE Alu 0 147 1 2 1066 252 86 0 0 chr13 63174107 63174142 -57110170 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1066 2002 253 162 24 chr13 63174772 63175615 -57108697 - RCHARR1 DNA MER1_type -14 960 1 2 1066 324 232 14 0 chr13 63176530 63176599 -57107713 + ID4_ SINE ID 3 72 -11 2 1066 399 284 85 50 chr13 63176599 63176672 -57107640 + ID_B1 SINE B4 79 153 -71 2 133 4004 149 126 71 chr13 63176672 63177527 -57106785 - RMER19B LTR ERVK 0 902 1 3 1067 399 284 85 50 chr13 63177527 63177594 -57106718 + ID_B1 SINE B4 154 224 0 2 1067 410 200 25 0 chr13 63177755 63177833 -57106479 - B1_Mur1 SINE Alu -16 133 54 3 1067 337 173 0 156 chr13 63177833 63177929 -57106383 - RMER10B LTR ERVL 0 398 318 3 1067 440 310 229 42 chr13 63177935 63178221 -57106091 - RMER17C-int LTR ERVK -75 3163 2823 3 1067 2369 94 19 0 chr13 63178221 63178540 -57105772 + ORR1A2 LTR MaLR 3 327 0 3 1067 389 225 151 124 chr13 63178540 63178749 -57105563 - RMER17C-int LTR ERVK -416 2822 2609 3 1067 297 200 0 0 chr13 63178752 63178812 -57105500 - MYSERV6-int LTR ERVK -177 8782 8723 3 1067 2996 167 63 48 chr13 63178901 63179569 -57104743 - RLTR19-int LTR ERVK -3130 3007 2330 3 1067 2357 93 110 37 chr13 63180203 63180604 -57103708 - RLTR23 LTR ERV1 0 430 1 3 1067 1541 173 48 27 chr13 63180836 63181168 -57103144 - RMER10B LTR ERVL -57 341 3 3 1067 286 197 90 15 chr13 63181168 63181224 -57103088 - B1_Mus1 SINE Alu -86 62 2 3 1067 241 250 0 48 chr13 63181855 63181939 -57102373 + MER103 DNA DNA 14 93 -73 3 1067 24 32 0 0 chr13 63183381 63183412 -57100900 + AT_rich Low_complexity Low_complexity 1 31 0 3 1067 1307 80 28 0 chr13 63183588 63183764 -57100548 - B2_Mm1a SINE B2 -9 184 4 3 1067 25 0 0 0 chr13 63183768 63183793 -57100519 + AT_rich Low_complexity Low_complexity 1 25 0 3 1067 5617 113 71 16 chr13 63184455 63185362 -57098950 + RMER17B LTR ERVK 3 958 0 3 1067 16671 73 8 28 chr13 63185563 63187499 -57096813 - L1_Mus1 LINE L1 0 6654 4623 3 1067 368 40 20 0 chr13 63187507 63187557 -57096755 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 1067 978 94 43 14 chr13 63187557 63187688 -57096624 - B1_Mus1 SINE Alu -9 139 3 3 1067 16671 90 15 57 chr13 63187688 63187738 -57096574 - L1_Mus1 LINE L1 -1261 4622 4575 3 1067 508 128 0 0 chr13 63187738 63187816 -57096496 - B2_Mm2 SINE B2 -113 82 5 3 1067 16671 90 15 57 chr13 63187816 63188992 -57095320 - L1_Mus1 LINE L1 -1261 4574 3443 3 1067 1368 127 0 26 chr13 63190119 63190346 -57093966 - URR1A DNA MER1_type -5 221 1 3 1067 275 243 40 0 chr13 63191336 63191410 -57092902 + B4A SINE B4 1 77 -215 3 1067 429 237 253 16 chr13 63191402 63191592 -57092720 - MTE2b LTR MaLR -144 235 1 3 1067 264 130 0 0 chr13 63191696 63191742 -57092570 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1067 486 0 0 0 chr13 63192081 63192135 -57092177 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1067 181 182 0 35 chr13 63193169 63193226 -57091086 + CT-rich Low_complexity Low_complexity 5 59 0 3 1067 21 57 0 0 chr13 63193236 63193271 -57091041 + AT_rich Low_complexity Low_complexity 1 35 0 3 1067 947 79 20 7 chr13 63193327 63193479 -57090833 + (TTTC)n Simple_repeat Simple_repeat 1 154 0 3 1067 681 266 114 94 chr13 63194891 63195293 -57089019 - RMER5 LTR ERV1 -10 524 115 3 1067 225 0 0 0 chr13 63195821 63195846 -57088466 + (CCA)n Simple_repeat Simple_repeat 3 27 0 3 1067 21 0 0 0 chr13 63196793 63196814 -57087498 + AT_rich Low_complexity Low_complexity 1 21 0 3 1067 342 45 0 0 chr13 63198619 63198663 -57085649 + (CAGAGA)n Simple_repeat Simple_repeat 3 46 0 3 1067 354 127 0 0 chr13 63198722 63198793 -57085519 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1067 396 208 162 38 chr13 63198809 63198969 -57085343 - L1M4 LINE L1 -948 5198 5019 3 1067 773 194 196 22 chr13 63201145 63201329 -57082983 + B3 SINE B2 1 216 0 3 1067 402 279 45 19 chr13 63201407 63201564 -57082748 + L1MC5 LINE L1 6704 6864 -1097 3 1067 345 333 16 86 chr13 63201577 63201764 -57082548 + ID_B1 SINE B4 44 217 -7 3 1067 1171 75 0 0 chr13 63201928 63202089 -57082223 + B2_Mm2 SINE B2 1 161 -34 3 1067 351 0 0 0 chr13 63202089 63202128 -57082184 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 3 1067 670 213 0 0 chr13 63202585 63202712 -57081600 + B1_Mus2 SINE Alu 1 127 -20 3 1067 336 102 0 0 chr13 63202715 63202764 -57081548 + (TTA)n Simple_repeat Simple_repeat 1 49 0 3 1067 269 222 184 18 chr13 63202884 63203130 -57081182 - L1MD LINE L1 -842 5517 5230 3 1067 261 329 0 24 chr13 63203303 63203387 -57080925 - PB1 SINE Alu -40 87 6 3 1067 276 265 0 0 chr13 63203474 63203542 -57080770 - L1_Mur1 LINE L1 -1265 4621 4554 3 1067 916 262 113 11 chr13 63203915 63204278 -57080034 - L1MA5 LINE L1 -127 6173 5774 3 1067 866 268 83 9 chr13 63204873 63205103 -57079209 - B4A SINE B4 0 292 46 3 1067 419 149 57 38 chr13 63206272 63206377 -57077935 - Lx7 LINE L1 -1861 5835 5729 3 1067 310 298 109 30 chr13 63208166 63208358 -57075954 - MLT1D LTR MaLR -55 450 243 3 1067 246 275 98 80 chr13 63208358 63208583 -57075729 + MLT1A0 LTR MaLR 3 231 -134 3 1067 409 271 10 0 chr13 63209426 63209522 -57074790 + B1F SINE Alu 32 128 -21 3 1067 685 87 23 23 chr13 63210517 63210647 -57073665 + (TCCCC)n Simple_repeat Simple_repeat 4 133 0 3 1067 505 312 24 65 chr13 63211408 63211576 -57072736 - RSINE1 SINE B4 -2 163 3 3 1067 540 201 18 173 chr13 63211590 63211758 -57072554 - B1F SINE Alu 0 149 8 3 1067 281 333 101 35 chr13 63212020 63212219 -57072093 - MLT1J LTR MaLR -65 447 236 3 1067 224 301 55 0 chr13 63212277 63212350 -57071962 - ID4_ SINE ID -2 81 5 3 1067 364 242 11 0 chr13 63216770 63216865 -57067447 - PB1D9 SINE Alu 0 120 25 3 1067 211 250 33 0 chr13 63216882 63216942 -57067370 - PB1D10 SINE Alu -6 111 50 3 1067 544 280 76 45 chr13 63217053 63217367 -57066945 - MER45B DNA Tip100 -4 1036 713 3 1067 1646 166 108 15 chr13 63217411 63217753 -57066559 + ORR1D1 LTR MaLR 1 374 0 3 1067 1368 87 11 0 chr13 63217772 63217956 -57066356 + B2_Mm1t SINE B2 1 186 -7 3 1067 408 342 56 50 chr13 63218132 63218452 -57065860 - MER45B DNA Tip100 -587 453 132 3 1067 375 23 0 0 chr13 63218725 63218769 -57065543 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1067 183 98 38 38 chr13 63222429 63222482 -57061830 + A-rich Low_complexity Low_complexity 2 54 0 3 1067 612 218 0 90 chr13 63222788 63222944 -57061368 + B1_Mur2 SINE Alu 2 143 -6 3 1067 428 315 16 52 chr13 63225044 63225235 -57059077 - MLT1J1 LTR MaLR -227 217 34 3 1067 1834 109 117 15 chr13 63225892 63226218 -57058094 + RLTR15 LTR ERVK 1 359 0 3 1067 650 217 85 0 chr13 63226619 63226748 -57057564 - B1F SINE Alu 0 149 10 3 1067 541 269 63 41 chr13 63226748 63226781 -57057531 - ID_B1 SINE B4 0 224 61 3 1067 1192 54 7 0 chr13 63226915 63227062 -57057250 + B1_Mus1 SINE Alu 1 148 0 3 1067 312 352 63 74 chr13 63228261 63228546 -57055766 - L1MD2 LINE L1 -49 6310 6029 3 1067 242 214 104 0 chr13 63229189 63229301 -57055011 - L1MDa LINE L1 -3062 3475 3346 3 1067 473 238 178 19 chr13 63229338 63229693 -57054619 - L1MDa LINE L1 -3640 2897 2480 3 1067 426 362 48 0 chr13 63229726 63229955 -57054357 - L1MDa LINE L1 -4273 2360 2121 3 1067 295 326 43 0 chr13 63229978 63230070 -57054242 + PB1D10 SINE Alu 19 114 -3 3 1067 577 282 97 33 chr13 63230200 63230625 -57053687 - L1MDa LINE L1 -4563 2070 1619 3 1067 240 293 57 49 chr13 63230706 63230828 -57053484 + L1ME3 LINE L1 6005 6127 -35 3 1067 3282 71 9 16 chr13 63230914 63231359 -57052953 + L1_Mus1 LINE L1 6126 6567 0 3 1067 28 48 0 0 chr13 63231360 63231402 -57052910 + AT_rich Low_complexity Low_complexity 1 42 0 3 1067 249 394 8 8 chr13 63231633 63231761 -57052551 + B1F SINE Alu 5 132 -17 3 1067 300 333 87 31 chr13 63231983 63232212 -57052100 + L1M5 LINE L1 2883 3124 -3022 3 1067 423 52 0 0 chr13 63232246 63232304 -57052008 + (TTGG)n Simple_repeat Simple_repeat 2 59 0 3 1067 515 228 78 39 chr13 63232587 63232782 -57051530 + MTEb LTR MaLR 149 375 -4 3 1067 273 299 8 101 chr13 63233110 63233133 -57051179 + MT2B LTR ERVL 151 162 -439 3 1067 433 276 48 0 chr13 63233133 63233238 -57051074 + PB1D10 SINE Alu 2 111 -6 3 1067 330 258 122 108 chr13 63233234 63233315 -57050997 + ID_B1 SINE B4 80 151 -73 3 1067 1131 35 0 46 chr13 63233315 63233467 -57050845 + B1_Mm SINE Alu 1 145 -2 3 1067 330 258 122 108 chr13 63233467 63233524 -57050788 + ID_B1 SINE B4 152 220 -4 3 1067 674 143 7 20 chr13 63233525 63233675 -57050637 + GA-rich Low_complexity Low_complexity 1 148 0 3 1067 578 234 52 52 chr13 63233675 63233810 -57050502 + B1_Mur1 SINE Alu 5 139 -10 3 1067 321 26 0 0 chr13 63233810 63233848 -57050464 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 1067 655 215 128 7 chr13 63233917 63234080 -57050232 + ID_B1 SINE B4 66 246 -46 3 1067 1083 275 20 86 chr13 63234099 63234505 -57049807 - MTE2a LTR MaLR 0 379 1 3 1067 275 257 91 9 chr13 63234687 63234797 -57049515 + L1M5 LINE L1 5544 5662 -462 3 1067 1208 48 0 7 chr13 63235938 63236085 -57048227 - B1_Mm SINE Alu 0 147 2 3 1067 533 229 133 17 chr13 63236955 63237075 -57047237 - RSINE1 SINE B4 -31 134 1 3 1067 341 274 35 23 chr13 63237096 63237182 -57047130 - MER5A1 DNA MER1_type -11 155 69 3 1067 471 256 50 17 chr13 63238091 63238210 -57046102 - RSINE1 SINE B4 -40 125 3 3 1067 357 258 134 0 chr13 63238327 63238424 -57045888 + PB1D10 SINE Alu 11 120 0 3 1067 320 303 56 0 chr13 63238480 63238569 -57045743 + PB1D10 SINE Alu 2 95 -22 3 1067 601 224 43 0 chr13 63238489 63238605 -57045707 + ID_B1 SINE B4 92 212 -12 3 1067 370 336 22 44 chr13 63240041 63240178 -57044134 + L2b LINE L2 3242 3375 0 3 1067 198 293 120 51 chr13 63240268 63240426 -57043886 + MIRc SINE MIR 69 237 -31 3 1067 689 0 12 0 chr13 63240592 63240673 -57043639 + (TG)n Simple_repeat Simple_repeat 2 83 0 3 1067 252 290 0 0 chr13 63240891 63240953 -57043359 + (CA)n Simple_repeat Simple_repeat 2 63 0 3 1067 184 243 0 0 chr13 63241167 63241204 -57043108 + L3 LINE CR1 4446 4482 -7 3 1067 2860 29 6 178 chr13 63243375 63243846 -57040466 - RLTR10 LTR ERVK 0 390 1 3 1067 9158 13 0 0 chr13 63243848 63244843 -57039469 - RLTR10-int LTR ERVK -3 1984 990 3 1067 319 264 62 39 chr13 63244925 63245055 -57039257 - RLTR10-int LTR ERVK -5987 1594 1462 3 1067 8256 50 6 8 chr13 63245119 63246139 -57038173 - RLTR10-int LTR ERVK -989 998 3 3 1067 2465 31 7 161 chr13 63246151 63246567 -57037745 - RLTR10 LTR ERVK -38 352 1 4 1067 360 0 0 0 chr13 63246921 63246961 -57037351 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1067 228 380 36 18 chr13 63247294 63247460 -57036852 + MLT1L LTR MaLR 237 405 -205 4 1067 4805 57 14 41 chr13 63248702 63249340 -57034972 + L1_Mus2 LINE L1 5946 6566 0 4 1067 267 190 0 0 chr13 63249443 63249501 -57034811 + (CCA)n Simple_repeat Simple_repeat 1 58 0 4 1067 858 198 0 0 chr13 63250487 63250664 -57033648 + GA-rich Low_complexity Low_complexity 2 178 0 4 1067 240 59 0 0 chr13 63251346 63251380 -57032932 + (TTTTTG)n Simple_repeat Simple_repeat 5 38 0 4 1067 324 309 35 24 chr13 63251381 63251445 -57032867 - PB1D7 SINE Alu -1 148 8 4 1067 330 284 0 47 chr13 63251445 63251530 -57032782 - ID_B1 SINE B4 -55 169 89 4 1067 842 246 257 6 chr13 63251569 63251904 -57032408 + MTD LTR MaLR 1 419 0 4 1067 641 273 96 5 chr13 63252914 63253120 -57031192 + B4 SINE B4 51 283 -9 4 1067 268 194 14 127 chr13 63253262 63253333 -57030979 + RSINE1 SINE B4 77 139 -26 4 1067 324 0 0 0 chr13 63253333 63253369 -57030943 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1067 1385 188 34 14 chr13 63253526 63253817 -57030495 + Lx4B LINE L1 6758 7054 -4 4 1067 918 125 0 0 chr13 63254639 63254783 -57029529 + (TC)n Simple_repeat Simple_repeat 1 144 0 4 1067 477 0 0 0 chr13 63255172 63255225 -57029087 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1067 323 73 18 0 chr13 63258140 63258195 -57026117 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 4 1067 2954 24 0 6 chr13 63258253 63258592 -57025720 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1067 13812 25 15 3 chr13 63258592 63260160 -57024152 - IAPEz-int LTR ERVK 0 6481 4896 4 1067 40459 22 14 8 chr13 63260156 63264745 -57019567 - IAPEz-int LTR ERVK -1858 4623 8 4 1067 2954 24 0 6 chr13 63264745 63265084 -57019228 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1067 191 36 0 35 chr13 63267999 63268028 -57016284 + (TTTTG)n Simple_repeat Simple_repeat 5 32 0 4 1067 323 318 11 0 chr13 63268031 63268119 -57016193 - B1F2 SINE Alu -12 137 49 4 1067 425 232 40 10 chr13 63268178 63268278 -57016034 + B1F2 SINE Alu 36 138 -11 4 1067 282 305 55 28 chr13 63268520 63268665 -57015647 + B1F SINE Alu 1 149 0 4 1067 768 136 0 0 chr13 63268938 63269063 -57015249 + (TTTC)n Simple_repeat Simple_repeat 2 126 0 4 1067 1200 54 0 13 chr13 63269065 63269214 -57015098 - B1_Mm SINE Alu 0 147 1 4 1067 217 374 14 48 chr13 63269561 63269707 -57014605 + MIR3 SINE MIR 5 145 -63 4 1067 3613 18 0 0 chr13 63270067 63270463 -57013849 + MTA_Mm LTR MaLR 1 396 0 4 1067 229 218 47 82 chr13 63270602 63270687 -57013625 + MER73 LTR ERVL 292 373 -271 4 1067 318 320 129 81 chr13 63270997 63271269 -57013043 - MLT1A LTR MaLR -9 365 81 4 1067 873 96 0 0 chr13 63272439 63272564 -57011748 + (TCCC)n Simple_repeat Simple_repeat 4 128 0 4 1067 186 43 0 0 chr13 63272688 63272711 -57011601 + (GA)n Simple_repeat Simple_repeat 2 24 0 4 1067 265 305 42 0 chr13 63275344 63275439 -57008873 - PB1D10 SINE Alu -18 99 1 4 1067 468 0 0 0 chr13 63275673 63275725 -57008587 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1067 645 58 0 0 chr13 63276614 63276700 -57007612 + (TCC)n Simple_repeat Simple_repeat 3 88 0 4 1067 539 348 68 0 chr13 63278474 63278695 -57005617 - MLT1B LTR MaLR -45 345 110 4 1067 342 0 0 0 chr13 63281177 63281215 -57003097 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 1067 414 39 0 0 chr13 63281549 63281601 -57002711 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 1067 459 223 0 26 chr13 63281603 63281718 -57002594 + Lx9 LINE L1 7532 7643 -1 4 1067 744 316 103 26 chr13 63282311 63282817 -57001495 + L1M4 LINE L1 4112 4656 -1490 4 1067 1204 62 0 0 chr13 63282817 63282963 -57001349 + B1_Mus2 SINE Alu 1 146 -1 4 1067 240 59 0 0 chr13 63283039 63283073 -57001239 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1067 744 200 37 24 chr13 63283075 63283255 -57001057 + L1M4 LINE L1 4622 4807 -1339 4 1067 656 314 86 17 chr13 63283727 63284086 -57000226 + L1MB7 LINE L1 5733 6116 -68 4 1067 212 211 0 37 chr13 63284272 63284326 -56999986 - B1_Mus1 SINE Alu -80 68 17 4 1067 233 244 70 70 chr13 63284287 63284415 -56999897 - B3A SINE B2 -70 128 1 4 1067 374 267 9 47 chr13 63284425 63284531 -56999781 - B1F SINE Alu -7 142 41 4 1067 288 77 0 0 chr13 63284531 63284570 -56999742 + (TTCTCC)n Simple_repeat Simple_repeat 1 39 0 4 1067 405 147 74 0 chr13 63284579 63284674 -56999638 - Lx LINE L1 -4 6650 6549 4 1067 8384 45 0 1 chr13 63284750 63285839 -56998473 - L1Md_F2 LINE L1 -13 6569 5482 4 1067 21 0 0 0 chr13 63286690 63286711 -56997601 + AT_rich Low_complexity Low_complexity 1 21 0 4 1067 731 188 0 0 chr13 63286921 63287059 -56997253 - B1_Mur4 SINE Alu -1 149 12 4 1067 433 285 0 62 chr13 63287059 63287082 -56997230 - ID_B1 SINE B4 -1 223 73 4 1067 363 121 0 0 chr13 63291363 63291421 -56992891 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1067 295 317 33 16 chr13 63292815 63292937 -56991375 + B4A SINE B4 33 156 -136 4 1067 198 0 0 0 chr13 63293059 63293081 -56991231 + (TC)n Simple_repeat Simple_repeat 1 22 0 4 1067 399 41 0 0 chr13 63293081 63293129 -56991183 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1067 447 274 114 20 chr13 63293246 63293395 -56990917 - RSINE1 SINE B4 0 165 3 4 1067 2258 80 12 60 chr13 63293491 63293823 -56990489 - ORR1A3 LTR MaLR -8 318 3 4 1067 308 341 0 0 chr13 63293886 63293974 -56990338 - B4A SINE B4 -201 91 4 4 1067 374 241 72 27 chr13 63294116 63294227 -56990085 - PB1D10 SINE Alu -1 116 1 4 1067 304 213 42 85 chr13 63294450 63294568 -56989744 + B1F2 SINE Alu 37 149 0 4 1067 213 39 0 0 chr13 63294572 63294598 -56989714 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 1067 428 296 73 24 chr13 63294695 63294941 -56989371 - HAL1b LINE L1 -639 1370 1113 4 1067 468 0 0 0 chr13 63296236 63296288 -56988024 + (GA)n Simple_repeat Simple_repeat 1 52 0 4 1067 1072 204 102 16 chr13 63296839 63297093 -56987219 + B4 SINE B4 15 290 -2 4 1067 846 56 0 0 chr13 63297178 63297286 -56987026 + (TTTCC)n Simple_repeat Simple_repeat 3 110 0 4 1067 1239 41 7 0 chr13 63297306 63297451 -56986861 - B1_Mm SINE Alu -1 146 1 4 1067 4512 156 48 51 chr13 63297500 63297780 -56986532 - RMER21A LTR ERV1 -6 941 701 4 1067 828 30 0 0 chr13 63297780 63297879 -56986433 + (TTC)n Simple_repeat Simple_repeat 2 100 0 4 1067 4512 156 48 51 chr13 63297879 63298493 -56985819 - RMER21A LTR ERV1 -247 700 50 4 1067 22 35 0 0 chr13 63298661 63298690 -56985622 + AT_rich Low_complexity Low_complexity 1 29 0 4 1067 412 256 0 0 chr13 63298751 63298833 -56985479 - B1F1 SINE Alu -67 82 1 4 1067 298 238 152 38 chr13 63298870 63298975 -56985337 + PB1D10 SINE Alu 1 117 0 4 1067 321 47 0 0 chr13 63300033 63300076 -56984236 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 4 1067 4907 101 18 20 chr13 63300076 63300781 -56983531 - Lx LINE L1 -33 6621 5918 4 1067 1044 306 51 84 chr13 63301368 63301739 -56982573 - MTE2b LTR MaLR -20 359 1 4 1067 459 221 0 0 chr13 63302016 63302102 -56982210 - ID_B1 SINE B4 -17 207 122 4 1067 197 139 5 126 chr13 63302145 63302343 -56981969 + CT-rich Low_complexity Low_complexity 3 176 0 4 1067 212 353 0 0 chr13 63302346 63302431 -56981881 + C-rich Low_complexity Low_complexity 6 90 0 4 1067 500 274 64 8 chr13 63302435 63302560 -56981752 - ID_B1 SINE B4 -77 147 16 4 1067 245 250 0 0 chr13 63303408 63303456 -56980856 - BC1_Mm scRNA scRNA -96 56 9 4 1067 358 358 32 57 chr13 63303467 63303624 -56980688 - RSINE1 SINE B4 -4 161 9 4 1067 880 45 0 43 chr13 63303815 63303826 -56980486 - B1_Mm SINE Alu -1 146 140 4 1067 276 53 0 0 chr13 63303826 63303864 -56980448 + (GTTTG)n Simple_repeat Simple_repeat 2 39 0 4 1067 880 45 0 43 chr13 63303864 63303969 -56980343 - B1_Mm SINE Alu -8 139 35 4 1067 2412 127 92 8 chr13 63304008 63304389 -56979923 - MTC LTR MaLR -8 413 1 4 1067 236 250 0 55 chr13 63304485 63304540 -56979772 - tRNA-Ala-GCA tRNA tRNA -8 67 16 4 1067 306 0 0 0 chr13 63306976 63307010 -56977302 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1068 190 296 18 0 chr13 63308031 63308094 -56976218 + MIR SINE MIR 57 121 -87 4 1068 239 260 164 0 chr13 63308490 63308563 -56975749 + PB1 SINE Alu 36 120 -7 4 1068 359 309 89 0 chr13 63309205 63309328 -56974984 - L3b LINE CR1 -268 214 81 4 1068 211 320 53 13 chr13 63310589 63310665 -56973647 - RSINE1 SINE B4 -85 80 2 4 1068 211 114 0 64 chr13 63311362 63311409 -56972903 + T-rich Low_complexity Low_complexity 2 45 0 4 1068 365 320 107 0 chr13 63313712 63313834 -56970478 - ID_B1 SINE B4 -7 217 83 4 1068 302 67 0 22 chr13 63315300 63315346 -56968966 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1068 262 235 163 12 chr13 63315347 63315433 -56968879 - PB1D9 SINE Alu -6 114 16 4 1068 431 277 99 26 chr13 63315514 63315666 -56968646 + Charlie5 DNA MER1_type 2270 2432 -192 4 1068 3406 242 111 25 chr13 63316276 63316926 -56967386 + RMER1C Other Other 391 1054 -288 4 1068 1191 97 0 93 chr13 63316926 63317120 -56967192 + B2_Mm2 SINE B2 1 176 -19 4 1068 3406 239 118 25 chr13 63317120 63317387 -56966925 + RMER1C Other Other 1055 1342 0 4 1068 304 278 113 0 chr13 63317433 63317530 -56966782 + PB1D10 SINE Alu 5 112 -5 4 1068 22 0 0 0 chr13 63317548 63317570 -56966742 + AT_rich Low_complexity Low_complexity 1 22 0 4 1068 312 232 147 29 chr13 63317657 63317759 -56966553 - HAL1-3A_ME LINE L1 -770 2088 1975 4 1068 369 214 5 38 chr13 63317762 63317947 -56966365 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 1068 211 284 66 26 chr13 63318069 63318145 -56966167 - B4 SINE B4 -131 161 83 4 1068 2973 33 5 14 chr13 63319309 63319679 -56964633 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1068 29356 22 1 0 chr13 63319683 63322949 -56961363 - IAPEz-int LTR ERVK -3 6478 3210 4 1068 7499 86 155 7 chr13 63322948 63324086 -56960226 - IAPEz-int LTR ERVK -5168 1313 8 4 1068 2973 33 5 14 chr13 63324086 63324456 -56959856 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1068 1000 264 102 78 chr13 63324563 63324937 -56959375 - MLT1B LTR MaLR -7 383 1 5 1068 204 83 0 53 chr13 63325086 63325124 -56959188 + (TAAAAA)n Simple_repeat Simple_repeat 5 40 0 5 1068 599 255 131 84 chr13 63326287 63326561 -56957751 + B4 SINE B4 6 292 0 5 1068 426 39 0 0 chr13 63326578 63326630 -56957682 + (CATA)n Simple_repeat Simple_repeat 1 52 0 5 1068 261 0 0 0 chr13 63327886 63327915 -56956397 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1068 477 349 15 51 chr13 63331196 63331392 -56952920 - B3A SINE B2 -9 189 1 5 1068 464 252 67 0 chr13 63331392 63331514 -56952798 - B4A SINE B4 -59 233 103 5 1068 198 71 0 0 chr13 63331525 63331553 -56952759 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1068 262 271 16 25 chr13 63331600 63331689 -56952623 - B4 SINE B4 -201 91 2 5 1068 268 345 25 17 chr13 63331766 63331884 -56952428 - MIRb SINE MIR -23 245 127 5 1068 423 248 26 9 chr13 63332009 63332123 -56952189 - PB1D10 SINE Alu -1 116 1 5 1068 207 0 0 0 chr13 63334197 63334220 -56950092 + (CCCCCT)n Simple_repeat Simple_repeat 2 24 0 5 1068 486 0 0 0 chr13 63334731 63334785 -56949527 + (CACAC)n Simple_repeat Simple_repeat 1 54 0 5 1068 342 0 0 0 chr13 63334823 63334861 -56949451 + (TC)n Simple_repeat Simple_repeat 2 39 0 5 1068 366 23 0 0 chr13 63334862 63334905 -56949407 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1068 617 265 241 29 chr13 63335062 63335303 -56949009 + B4 SINE B4 1 292 0 5 1068 249 83 0 0 chr13 63335307 63335343 -56948969 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1068 1175 97 6 0 chr13 63335757 63335933 -56948379 + (TTCTC)n Simple_repeat Simple_repeat 4 180 0 5 1068 255 125 0 0 chr13 63335945 63335985 -56948327 + (TCC)n Simple_repeat Simple_repeat 3 42 0 5 1068 804 150 16 0 chr13 63336019 63336146 -56948166 - B2_Mm2 SINE B2 -66 129 1 5 1068 206 276 35 0 chr13 63336377 63336435 -56947877 - L4 LINE RTE 0 2029 1970 5 1068 279 256 163 0 chr13 63337487 63337573 -56946739 - PB1D10 SINE Alu 0 117 18 5 1068 189 0 0 0 chr13 63337859 63337880 -56946432 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1068 1607 42 5 0 chr13 63338403 63338594 -56945718 - B2_Mm1t SINE B2 0 193 2 5 1068 244 273 150 36 chr13 63338819 63338845 -56945467 - B2_Mm1a SINE B2 -7 186 1 5 1068 446 266 106 14 chr13 63338845 63338986 -56945326 - RSINE1 SINE B4 -10 155 2 5 1068 222 399 7 15 chr13 63339001 63339136 -56945176 - L2b LINE L2 -23 3352 3219 5 1068 450 287 51 39 chr13 63339152 63339284 -56945028 + RSINE1 SINE B4 8 145 -20 5 1068 198 0 0 0 chr13 63339284 63339306 -56945006 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1068 450 287 51 39 chr13 63339306 63339329 -56944983 + RSINE1 SINE B4 146 165 0 5 1068 282 143 0 0 chr13 63341134 63341183 -56943129 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 5 1068 278 82 41 0 chr13 63341286 63341335 -56942977 + (CCCG)n Simple_repeat Simple_repeat 2 52 0 5 1068 540 167 149 28 chr13 63343357 63343479 -56940833 + B1_Mur2 SINE Alu 13 149 0 5 1068 357 82 0 0 chr13 63344578 63344627 -56939685 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1068 441 0 0 0 chr13 63345478 63345527 -56938785 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1068 447 78 0 0 chr13 63345527 63345591 -56938721 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1068 183 100 0 0 chr13 63346229 63346259 -56938053 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1068 189 0 0 0 chr13 63348669 63348690 -56935622 + (TGGGGG)n Simple_repeat Simple_repeat 4 24 0 5 1068 522 0 0 0 chr13 63350310 63350368 -56933944 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1068 355 301 122 51 chr13 63350927 63351221 -56933091 - L1ME1 LINE L1 -214 5965 5651 5 1068 243 0 0 0 chr13 63353031 63353058 -56931254 + (CTG)n Simple_repeat Simple_repeat 1 27 0 5 1068 467 156 49 12 chr13 63353182 63353344 -56930968 + (TG)n Simple_repeat Simple_repeat 2 169 0 5 1068 724 115 27 27 chr13 63353361 63353585 -56930727 + (TG)n Simple_repeat Simple_repeat 1 224 0 5 1068 653 103 22 49 chr13 63353602 63353786 -56930526 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1068 225 0 0 0 chr13 63353889 63353914 -56930398 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1068 339 194 42 0 chr13 63354878 63354950 -56929362 - PB1D9 SINE Alu -1 119 45 5 1068 630 214 0 25 chr13 63355919 63356039 -56928273 + ID_B1 SINE B4 103 219 -5 5 1068 423 78 0 0 chr13 63357899 63357963 -56926349 + (T)n Simple_repeat Simple_repeat 1 64 0 5 1068 1058 43 57 14 chr13 63357965 63358105 -56926207 - B1_Mm SINE Alu -1 146 1 5 1068 929 267 86 60 chr13 63358519 63359033 -56925279 - L1MB8 LINE L1 -16 6162 5636 5 1068 324 0 0 0 chr13 63360758 63360794 -56923518 + (TCTCCC)n Simple_repeat Simple_repeat 1 36 0 5 1068 725 236 83 11 chr13 63364106 63364286 -56920026 - B3A SINE B2 -4 194 2 5 1068 377 191 43 17 chr13 63364842 63364950 -56919362 - PB1 SINE Alu -7 120 11 5 1068 1174 62 0 0 chr13 63365814 63365958 -56918354 + B1_Mus2 SINE Alu 1 144 -3 5 1068 189 107 0 0 chr13 63365959 63365987 -56918325 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1068 454 258 81 40 chr13 63366601 63366823 -56917489 - Lx9 LINE L1 -1 7643 7413 5 1068 36 40 0 0 chr13 63369490 63369540 -56914772 + AT_rich Low_complexity Low_complexity 1 50 0 5 1068 747 262 184 27 chr13 63370156 63370450 -56913862 - MLT1D LTR MaLR 0 505 166 5 1068 326 151 14 0 chr13 63372134 63372207 -56912105 + GA-rich Low_complexity Low_complexity 2 75 0 5 1068 22 35 0 0 chr13 63372411 63372440 -56911872 + AT_rich Low_complexity Low_complexity 1 29 0 5 1068 216 0 0 0 chr13 63374900 63374924 -56909388 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1068 333 159 0 0 chr13 63377847 63377910 -56906402 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1068 542 279 7 22 chr13 63377929 63378068 -56906244 + ID_B1 SINE B4 88 224 0 5 1068 576 0 0 0 chr13 63379255 63379319 -56904993 + (CAG)n Simple_repeat Simple_repeat 1 64 0 5 1068 22 56 0 0 chr13 63384126 63384162 -56900150 + AT_rich Low_complexity Low_complexity 1 36 0 5 1068 293 316 75 68 chr13 63385310 63385456 -56898856 - MER58B DNA MER1_type -1 340 194 5 1068 1238 48 0 0 chr13 63387088 63387235 -56897077 + B1_Mus1 SINE Alu 2 148 0 5 1068 630 157 0 0 chr13 63387266 63387406 -56896906 + GA-rich Low_complexity Low_complexity 1 140 0 5 1068 212 300 14 41 chr13 63387451 63387524 -56896788 + PB1D10 SINE Alu 38 108 -9 5 1068 263 222 59 109 chr13 63387575 63387676 -56896636 + MT2B LTR ERVL 161 256 -345 5 1068 440 204 53 11 chr13 63387588 63387682 -56896630 + B1_Mur1 SINE Alu 12 109 -40 5 1068 252 284 15 0 chr13 63388218 63388285 -56896027 - ID4 SINE ID -12 71 4 5 1068 299 299 124 0 chr13 63388608 63388705 -56895607 - MER20 DNA MER1_type -89 130 22 5 1068 358 287 11 0 chr13 63389505 63389592 -56894720 + B1_Mus2 SINE Alu 2 89 -58 5 1068 306 222 35 69 chr13 63389514 63389601 -56894711 + MT2B2 LTR ERVL 175 258 -326 5 1068 555 220 335 14 chr13 63390273 63390494 -56893818 - B4 SINE B4 0 292 1 5 1068 243 61 0 0 chr13 63393621 63393654 -56890658 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1068 653 263 0 15 chr13 63393654 63393778 -56890534 - B1_Mur1 SINE Alu -13 136 13 5 1068 245 380 73 9 chr13 63393682 63393791 -56890521 - B4 SINE B4 -95 197 82 5 1068 1274 41 0 0 chr13 63393826 63393973 -56890339 + B1_Mus2 SINE Alu 1 147 0 5 1068 326 300 36 0 chr13 63394457 63394567 -56889745 + PB1D7 SINE Alu 3 116 -4 5 1068 813 259 23 51 chr13 63395979 63396195 -56888117 + ID_B1 SINE B4 1 210 -14 5 1068 1439 57 17 0 chr13 63397351 63397528 -56886784 + B2_Mm2 SINE B2 2 181 -14 5 1068 328 89 0 0 chr13 63398696 63398741 -56885571 - HAL1-3A_ME LINE L1 -836 2022 1978 5 1068 790 197 13 13 chr13 63399673 63399822 -56884490 - B1_Mur1 SINE Alu 0 149 1 5 1068 310 303 0 0 chr13 63408668 63408744 -56875568 - ID_B1 SINE B4 -41 183 108 5 1068 1250 34 7 0 chr13 63409003 63409149 -56875163 - B1_Mus2 SINE Alu 0 147 1 5 1068 370 297 104 6 chr13 63409155 63409338 -56874974 - L1MB3 LINE L1 -4 6179 5979 5 1068 481 254 71 8 chr13 63409520 63409647 -56874665 - RSINE1 SINE B4 -25 140 6 5 1068 334 273 141 53 chr13 63410412 63410711 -56873601 + ORR1D2 LTR MaLR 9 339 -20 5 1068 417 20 0 0 chr13 63411390 63411440 -56872872 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 1068 451 184 40 10 chr13 63415858 63415957 -56868355 + MTE2b LTR MaLR 276 377 -2 5 1068 1230 29 0 0 chr13 63416445 63416582 -56867730 - B1_Mm SINE Alu -10 137 1 5 1068 30 45 0 0 chr13 63416818 63416862 -56867450 + AT_rich Low_complexity Low_complexity 1 44 0 5 1068 589 168 35 17 chr13 63416893 63417008 -56867304 - ID_B1 SINE B4 0 224 108 5 1068 367 226 0 0 chr13 63417164 63417256 -56867056 - L1MB4 LINE L1 -409 5882 5791 5 1068 454 273 112 26 chr13 63417545 63417855 -56866457 - L1MB4 LINE L1 -749 5397 5057 5 1068 360 337 70 17 chr13 63417929 63418101 -56866211 + ORR1E LTR MaLR 2 182 -177 5 1068 313 263 47 107 chr13 63418114 63418263 -56866049 + ORR1E LTR MaLR 240 379 0 5 1068 492 254 25 123 chr13 63421026 63421188 -56863124 - RSINE1 SINE B4 -18 147 2 5 1068 953 70 85 0 chr13 63421390 63421519 -56862793 + B1_Mus1 SINE Alu 2 141 -7 5 1068 240 143 0 0 chr13 63421525 63421567 -56862745 + (A)n Simple_repeat Simple_repeat 1 42 0 5 1068 34 0 0 0 chr13 63421606 63421640 -56862672 + AT_rich Low_complexity Low_complexity 1 34 0 5 1068 473 273 126 0 chr13 63421640 63421783 -56862529 - RSINE1 SINE B4 -2 163 3 5 1068 1087 208 18 35 chr13 63421955 63422184 -56862128 - URR1B DNA MER1_type 0 225 1 5 1068 715 216 215 6 chr13 63422330 63422493 -56861819 - B3 SINE B2 -15 201 5 5 1068 933 239 0 20 chr13 63424154 63424355 -56859957 - B3A SINE B2 -1 197 1 6 1068 462 268 7 72 chr13 63424983 63425136 -56859176 - ID_B1 SINE B4 0 224 82 6 1068 291 215 15 0 chr13 63425985 63426050 -56858262 - RMER10A LTR ERVL 0 442 377 6 1068 189 26 79 0 chr13 63427075 63427113 -56857199 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 6 1068 358 346 68 57 chr13 63427427 63427675 -56856637 - L1ME2 LINE L1 -35 6129 5879 6 1068 909 181 7 0 chr13 63428323 63428472 -56855840 + B1_Mur4 SINE Alu 1 150 0 6 1068 298 263 40 0 chr13 63431660 63431736 -56852576 + ID4 SINE ID 3 81 -2 6 1068 433 151 0 76 chr13 63432405 63432484 -56851828 + B1_Mus2 SINE Alu 5 77 -70 6 1068 704 208 49 18 chr13 63432513 63432683 -56851629 + B3A SINE B2 2 157 -38 6 1068 318 232 44 44 chr13 63433330 63433465 -56850847 + L1ME4a LINE L1 5966 6100 -24 6 1068 207 162 0 0 chr13 63436017 63436054 -56848258 + CT-rich Low_complexity Low_complexity 1 37 0 6 1069 708 119 0 0 chr13 63439525 63439634 -56844678 + (GGGA)n Simple_repeat Simple_repeat 3 111 0 6 1069 1211 54 0 0 chr13 63439978 63440126 -56844186 - B1_Mus1 SINE Alu 0 148 1 6 1069 693 176 67 0 chr13 63440252 63440371 -56843941 - RSINE1 SINE B4 -31 134 8 6 1069 939 139 0 0 chr13 63440486 63440666 -56843646 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 1069 1510 68 5 0 chr13 63442199 63442390 -56841922 + B2_Mm1t SINE B2 2 193 0 6 1069 468 274 10 125 chr13 63442592 63442784 -56841528 - B4A SINE B4 0 292 123 6 1069 301 352 259 43 chr13 63443326 63443700 -56840612 - MER21B LTR ERV1 -397 466 12 6 1069 691 246 38 44 chr13 63444919 63445102 -56839210 - B3A SINE B2 -16 182 1 6 1069 466 209 47 19 chr13 63445163 63445270 -56839042 - PB1D7 SINE Alu -2 118 9 6 1069 329 256 21 32 chr13 63445187 63445280 -56839032 - ID_B1 SINE B4 -53 171 80 6 1069 1611 32 11 0 chr13 63445289 63445477 -56838835 - B2_Mm1a SINE B2 -2 191 2 6 1069 1396 71 44 0 chr13 63445483 63445665 -56838647 - B2_Mm2 SINE B2 -4 191 2 6 1069 213 222 0 0 chr13 63446122 63446185 -56838127 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1069 845 28 0 18 chr13 63446492 63446601 -56837711 + (GAAA)n Simple_repeat Simple_repeat 2 108 0 6 1069 21 0 0 0 chr13 63446668 63446689 -56837623 + AT_rich Low_complexity Low_complexity 1 21 0 6 1069 379 288 181 30 chr13 63446895 63447458 -56836854 + Charlie1 DNA MER1_type 1274 1921 -860 6 1069 1394 98 5 20 chr13 63447459 63447657 -56836655 + B2_Mm2 SINE B2 1 195 0 6 1069 234 267 0 0 chr13 63447725 63447786 -56836526 + B4A SINE B4 94 154 -138 6 1069 227 290 89 10 chr13 63447842 63447943 -56836369 - RSINE1 SINE B4 -13 152 44 6 1069 251 325 203 0 chr13 63447955 63448167 -56836145 + Charlie1 DNA MER1_type 1932 2186 -595 6 1069 315 282 51 0 chr13 63448320 63448437 -56835875 + Charlie1 DNA MER1_type 2637 2759 -22 6 1069 394 321 0 0 chr13 63448463 63448572 -56835740 + RSINE1 SINE B4 28 136 -29 6 1069 357 24 0 0 chr13 63448573 63448615 -56835697 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 1069 1751 205 16 115 chr13 63449414 63449591 -56834721 + RLTR18B LTR ERVK 37 204 -308 6 1069 2071 167 189 16 chr13 63449591 63450041 -56834271 + RLTR11A LTR ERVK 1 528 0 6 1069 1751 205 16 115 chr13 63450041 63450360 -56833952 + RLTR18B LTR ERVK 205 484 -28 6 1069 21 36 0 0 chr13 63451277 63451305 -56833007 + AT_rich Low_complexity Low_complexity 1 28 0 6 1069 853 298 4 4 chr13 63452682 63452908 -56831404 - B4 SINE B4 -66 226 1 6 1069 793 138 36 0 chr13 63453956 63454094 -56830218 - B1_Mus1 SINE Alu 0 148 6 6 1069 7291 49 12 3 chr13 63454120 63455005 -56829307 + RLTR13B1 LTR ERVK 1 893 0 6 1069 896 245 141 54 chr13 63455145 63455550 -56828762 - L1MB2 LINE L1 -105 6066 5627 6 1069 387 271 28 0 chr13 63455572 63455679 -56828633 - PB1D10 SINE Alu -2 115 6 6 1069 310 206 90 30 chr13 63455682 63455782 -56828530 - L1MB2 LINE L1 -571 5609 5504 6 1069 180 0 0 0 chr13 63455784 63455804 -56828508 + (CACAA)n Simple_repeat Simple_repeat 3 22 0 6 1069 468 0 0 0 chr13 63455833 63455885 -56828427 + (CTA)n Simple_repeat Simple_repeat 2 53 0 6 1069 384 22 0 0 chr13 63455885 63455930 -56828382 + (TTC)n Simple_repeat Simple_repeat 3 47 0 6 1069 706 248 14 20 chr13 63455933 63456081 -56828231 - B1_Mur1 SINE Alu -1 148 2 6 1069 240 227 0 0 chr13 63456112 63456156 -56828156 - L1MB2 LINE L1 -732 5436 5393 6 1069 256 340 53 7 chr13 63456178 63456329 -56827983 - L1M3 LINE L1 -2424 3716 3559 6 1069 699 299 153 13 chr13 63456625 63456933 -56827379 - L1M3 LINE L1 -3154 2986 2636 6 1069 345 18 34 34 chr13 63456978 63457037 -56827275 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 6 1069 1223 22 0 0 chr13 63457037 63457175 -56827137 - B1_Mus1 SINE Alu -10 138 1 6 1069 684 235 92 32 chr13 63457535 63457720 -56826592 + ID_B1 SINE B4 15 210 -14 6 1069 329 212 27 14 chr13 63458257 63458344 -56825968 - RSINE1 SINE B4 -200 92 6 6 1069 433 284 105 16 chr13 63458534 63458849 -56825463 - L1MB4 LINE L1 -70 6110 5768 6 1069 685 232 169 115 chr13 63458912 63459243 -56825069 + MTD LTR MaLR 9 357 -22 6 1069 261 333 32 0 chr13 63459245 63459368 -56824944 + L1MB4 LINE L1 5874 6000 -180 6 1069 698 300 58 10 chr13 63459367 63459657 -56824655 - L1MB4 LINE L1 -533 5647 5350 6 1069 287 265 32 159 chr13 63460000 63460068 -56824244 - B1F SINE Alu -2 147 77 6 1069 561 226 28 0 chr13 63460068 63460174 -56824138 + PB1D9 SINE Alu 2 110 -10 6 1069 287 265 32 159 chr13 63460174 63460262 -56824050 - B1F SINE Alu -73 76 11 6 1069 231 244 0 113 chr13 63460262 63460359 -56823953 - L1MB4 LINE L1 -900 5246 5161 6 1069 270 252 0 3 chr13 63460362 63460431 -56823881 - ID4 SINE ID -72 80 13 6 1069 30 45 0 0 chr13 63460440 63460484 -56823828 + AT_rich Low_complexity Low_complexity 1 44 0 6 1069 203 146 24 0 chr13 63460503 63460544 -56823768 + (TTA)n Simple_repeat Simple_repeat 2 43 0 6 1069 455 276 29 22 chr13 63460554 63460691 -56823621 - RSINE1 SINE B4 -25 140 3 6 1069 358 287 71 29 chr13 63462022 63462162 -56822150 - RSINE1 SINE B4 -10 155 10 6 1069 2575 121 57 32 chr13 63462295 63462737 -56821575 - RLTR11B LTR ERVK 0 453 1 6 1069 180 77 0 0 chr13 63465095 63465121 -56819191 + (GGGA)n Simple_repeat Simple_repeat 2 27 0 6 1069 459 0 0 0 chr13 63465477 63465528 -56818784 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1069 1224 84 0 0 chr13 63465528 63465707 -56818605 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 1069 1218 102 0 0 chr13 63465718 63466134 -56818178 + (TG)n Simple_repeat Simple_repeat 1 416 0 6 1069 271 274 0 16 chr13 63466211 63466274 -56818038 - RSINE1 SINE B4 -97 68 7 6 1069 709 266 43 10 chr13 63466486 63466695 -56817617 + B3 SINE B2 1 216 0 6 1069 523 286 12 30 chr13 63467034 63467200 -56817112 - RSINE1 SINE B4 0 165 3 6 1069 748 229 61 30 chr13 63467227 63467425 -56816887 - B3 SINE B2 -5 211 8 6 1069 936 222 14 5 chr13 63469548 63469756 -56814556 + B3 SINE B2 1 210 -6 6 1069 1849 123 3 148 chr13 63469981 63470236 -56814076 - RLTR10E LTR ERVK 0 311 106 6 1069 1476 45 28 0 chr13 63470236 63470414 -56813898 - B2_Mm1t SINE B2 -9 184 2 6 1069 1849 123 3 148 chr13 63470414 63470522 -56813790 - RLTR10E LTR ERVK -206 105 1 6 1069 3389 48 0 0 chr13 63470728 63471124 -56813188 + MTA_Mm LTR MaLR 1 396 0 6 1069 3555 152 37 3 chr13 63471215 63471810 -56812502 + Lx LINE L1 6034 6648 -6 6 1069 271 270 212 12 chr13 63472526 63472691 -56811621 - MER20 DNA MER1_type -5 214 17 6 1069 276 288 0 0 chr13 63472796 63472869 -56811443 - ID4 SINE ID -7 76 4 6 1069 202 335 75 37 chr13 63473210 63473371 -56810941 + MIRb SINE MIR 69 239 -29 6 1069 760 152 15 0 chr13 63474005 63474137 -56810175 - B1_Mur4 SINE Alu -12 138 5 6 1069 189 341 85 31 chr13 63474140 63474270 -56810042 + MIRb SINE MIR 128 264 -4 6 1069 693 211 21 0 chr13 63474734 63474876 -56809436 - B1F SINE Alu 0 149 5 6 1069 663 279 102 0 chr13 63475150 63475347 -56808965 + ID_B1 SINE B4 8 224 0 6 1069 751 207 14 14 chr13 63475365 63475512 -56808800 + B1_Mur4 SINE Alu 2 148 -2 6 1069 1234 41 0 0 chr13 63477673 63477820 -56806492 - B1_Mus1 SINE Alu 0 148 2 6 1069 949 282 34 0 chr13 63478413 63478675 -56805637 + B4A SINE B4 4 274 -18 6 1069 23 0 0 0 chr13 63482930 63482953 -56801359 + AT_rich Low_complexity Low_complexity 1 23 0 6 1069 204 125 0 0 chr13 63483522 63483554 -56800758 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1069 1033 104 0 0 chr13 63484664 63484798 -56799514 - L1_Mur1 LINE L1 -194 5692 5559 6 1069 2121 87 27 0 chr13 63484791 63485090 -56799222 + Lx3_Mus LINE L1 4757 5063 -823 6 1069 1734 70 16 24 chr13 63485068 63485317 -56798995 + Lx3_Mus LINE L1 5750 5996 -1013 6 1069 215 298 26 17 chr13 63485732 63485848 -56798464 + (TATG)n Simple_repeat Simple_repeat 1 117 0 6 1069 307 280 0 99 chr13 63485850 63485899 -56798413 - RSINE1 SINE B4 -6 159 116 6 1069 2304 183 263 17 chr13 63485899 63486489 -56797823 + RMER19A LTR ERVK 3 737 0 6 1069 307 280 0 99 chr13 63486489 63486530 -56797782 - RSINE1 SINE B4 -50 115 78 6 1069 305 279 61 81 chr13 63486780 63486928 -56797384 + MLT1D LTR MaLR 346 490 -15 6 1069 451 237 189 26 chr13 63487229 63487541 -56796771 + L1MC1 LINE L1 4931 5293 -853 6 1069 300 358 61 45 chr13 63487591 63487837 -56796475 + B4 SINE B4 43 292 0 6 1069 765 298 69 35 chr13 63487868 63488387 -56795925 + L1MC1 LINE L1 5286 5839 -494 6 1069 612 262 33 56 chr13 63488532 63488746 -56795566 + L1MC1 LINE L1 6120 6328 -5 6 1069 4574 130 22 26 chr13 63489690 63490449 -56793863 + RMER6A LTR ERVK 1 756 0 6 1069 2007 207 57 88 chr13 63491252 63491765 -56792547 + RLTR18B LTR ERVK 14 510 -2 6 1069 192 70 45 23 chr13 63492045 63492089 -56792223 + (CAA)n Simple_repeat Simple_repeat 2 46 0 6 1069 943 305 117 25 chr13 63492622 63493338 -56790974 + L1ME1 LINE L1 5383 6164 -15 6 1069 11874 108 60 3 chr13 63493319 63494214 -56790098 + Lx4A LINE L1 3948 4918 -959 6 1069 234 116 0 0 chr13 63494214 63494257 -56790055 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1069 450 0 0 0 chr13 63494257 63494306 -56790006 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1069 11874 98 38 7 chr13 63494306 63495379 -56788933 + Lx4A LINE L1 4919 6026 -1032 6 1069 2093 83 83 0 chr13 63495379 63495681 -56788631 + ORR1A2 LTR MaLR 1 327 0 6 1069 3588 84 6 12 chr13 63495681 63495735 -56788577 + Lx4A LINE L1 6027 6075 -983 6 1069 713 248 177 48 chr13 63495736 63496007 -56788305 + ORR1D2 LTR MaLR 38 343 -27 7 1069 194 339 31 0 chr13 63497492 63497557 -56786755 + L2b LINE L2 3128 3194 -181 7 1069 942 151 165 16 chr13 63498584 63498766 -56785546 - B3 SINE B2 -7 209 1 7 1069 1059 184 92 0 chr13 63499069 63499276 -56785036 - URR1A DNA MER1_type 0 226 1 7 1069 467 189 139 19 chr13 63501901 63502009 -56782303 - B1_Mur2 SINE Alu -2 147 27 1 1069 2606 188 53 55 chr13 63502457 63503055 -56781257 - RLTR18 LTR ERVK -14 602 6 2 1069 24 32 0 0 chr13 63503374 63503405 -56780907 + AT_rich Low_complexity Low_complexity 1 31 0 3 1069 625 172 0 72 chr13 63503432 63503557 -56780755 + B1_Mur4 SINE Alu 3 118 -32 4 1069 225 296 0 112 chr13 63503864 63503944 -56780368 + ID4_ SINE ID 11 81 -2 5 1069 527 239 62 0 chr13 63505024 63505154 -56779158 + B4A SINE B4 145 282 -10 6 1069 438 269 144 27 chr13 63505975 63506197 -56778115 + RMER21B LTR ERV1 318 565 -277 7 1069 273 172 15 30 chr13 63507011 63507077 -56777235 - MT2B LTR ERVL 0 601 537 8 1069 312 27 0 0 chr13 63507077 63507114 -56777198 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 1069 268 235 20 26 chr13 63507114 63507267 -56777045 + (TA)n Simple_repeat Simple_repeat 1 152 0 1 1069 205 190 34 17 chr13 63507290 63507349 -56776963 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 1069 1075 207 29 56 chr13 63507350 63507808 -56776504 - MT2B LTR ERVL -47 554 1 8 1069 462 263 7 7 chr13 63508584 63508722 -56775590 - Charlie1a DNA MER1_type -1 1454 1317 1 1069 785 169 250 0 chr13 63509996 63510168 -56774144 + B3 SINE B2 2 216 0 1 1069 363 167 0 0 chr13 63510168 63510258 -56774054 + A-rich Low_complexity Low_complexity 1 90 0 1 1069 264 189 26 26 chr13 63510746 63510822 -56773490 + C-rich Low_complexity Low_complexity 4 79 0 1 1069 612 239 73 16 chr13 63510941 63511238 -56773074 - MTD LTR MaLR 0 419 51 1 1069 234 296 20 75 chr13 63511131 63511277 -56773035 - MT2A LTR ERVL -395 138 1 1 1069 660 193 79 36 chr13 63511298 63511438 -56772874 + B1_Mus2 SINE Alu 2 147 0 1 1069 210 71 0 0 chr13 63512854 63512882 -56771430 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1069 416 132 26 13 chr13 63513150 63513227 -56771085 + MTC LTR MaLR 344 421 0 1 1069 5217 171 64 69 chr13 63513226 63513396 -56770916 + MTC-int LTR MaLR 2 155 -1103 1 1069 1474 78 16 0 chr13 63513396 63513588 -56770724 + B2_Mm2 SINE B2 1 195 0 2 1069 5217 171 64 69 chr13 63513588 63514674 -56769638 + MTC-int LTR MaLR 156 1252 -6 1 1069 2011 170 23 61 chr13 63514681 63515108 -56769204 + MTC LTR MaLR 1 411 -10 1 1069 478 231 69 0 chr13 63515115 63515245 -56769067 + B3 SINE B2 69 207 -9 2 1069 357 258 99 45 chr13 63515284 63515507 -56768805 + L1M5 LINE L1 5527 5761 -363 2 1069 1002 125 0 0 chr13 63515823 63515967 -56768345 + B1_Mur4 SINE Alu 2 145 -5 2 1069 198 0 0 0 chr13 63516054 63516076 -56768236 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1069 218 261 92 0 chr13 63516410 63516529 -56767783 + (CATCC)n Simple_repeat Simple_repeat 3 132 0 2 1069 1186 62 0 0 chr13 63516868 63517014 -56767298 + B1_Mus1 SINE Alu 3 148 0 2 1069 23 0 0 0 chr13 63517017 63517040 -56767272 + AT_rich Low_complexity Low_complexity 1 23 0 2 1069 237 33 0 0 chr13 63517703 63517733 -56766579 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 2 1069 1095 73 0 0 chr13 63517746 63517883 -56766429 - B1_Mm SINE Alu -10 137 1 2 1069 419 275 120 23 chr13 63518237 63518562 -56765750 + L1MA4 LINE L1 5583 5944 -359 3 1069 1177 244 99 32 chr13 63518819 63519323 -56764989 + L1M2 LINE L1 3211 3748 -2392 3 1069 984 227 34 19 chr13 63519326 63519533 -56764779 + B3 SINE B2 1 210 -6 3 1069 799 156 42 0 chr13 63519554 63519712 -56764600 + B2_Mm2 SINE B2 2 198 -18 3 1069 207 0 0 0 chr13 63519716 63519739 -56764573 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 3 1069 238 271 0 14 chr13 63519797 63519868 -56764444 + L1M2 LINE L1 3824 3893 -2250 3 1069 1225 56 0 0 chr13 63519870 63520030 -56764282 + B2_Mm1t SINE B2 1 160 -33 3 1069 225 0 0 0 chr13 63520030 63520055 -56764257 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 3 1069 1302 281 88 66 chr13 63520080 63520851 -56763461 + L1M2 LINE L1 3901 4688 -1455 3 1069 308 292 75 0 chr13 63520922 63521042 -56763270 + Tigger5 DNA MER2_type 106 234 -2172 3 1069 242 217 63 165 chr13 63522540 63522667 -56761645 - MLT1B LTR MaLR -276 114 1 3 1069 369 303 105 7 chr13 63522909 63523052 -56761260 + MER68 LTR ERVL 41 197 -366 3 1069 271 257 164 26 chr13 63523141 63523293 -56761019 + MER68 LTR ERVL 373 545 -18 3 1069 310 284 10 40 chr13 63523390 63523489 -56760823 - RSINE1 SINE B4 -68 97 2 4 1069 726 44 0 0 chr13 63523667 63523757 -56760555 + (GAAA)n Simple_repeat Simple_repeat 3 92 0 4 1069 204 67 0 0 chr13 63524258 63524288 -56760024 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1069 13614 65 3 7 chr13 63524401 63525251 -56759061 + L1VL2 LINE L1 177 1029 -5306 4 1069 4269 17 2 2 chr13 63525251 63525732 -56758580 - LTRIS_Mm LTR ERV1 0 482 2 4 1069 13614 70 17 76 chr13 63525732 63526372 -56757940 + L1VL2 LINE L1 1030 1670 -1945 4 1069 985 66 7 0 chr13 63526372 63526509 -56757803 + B1_Mus1 SINE Alu 11 148 0 4 1069 13614 70 17 76 chr13 63526509 63527820 -56756492 + L1VL2 LINE L1 1671 2987 -628 4 1069 1239 34 7 0 chr13 63527838 63527984 -56756328 - B1_Mm SINE Alu 0 147 1 4 1069 1388 75 32 0 chr13 63528145 63528332 -56755980 - B2_Mm2 SINE B2 -2 193 1 4 1069 962 73 0 14 chr13 63528403 63528542 -56755770 - B1_Mus2 SINE Alu 0 147 11 4 1069 441 234 46 93 chr13 63528409 63528560 -56755752 - B4 SINE B4 -72 220 77 4 1069 21 71 0 0 chr13 63528636 63528678 -56755634 + AT_rich Low_complexity Low_complexity 1 42 0 5 1069 21 36 0 0 chr13 63528773 63528801 -56755511 + AT_rich Low_complexity Low_complexity 1 28 0 5 1069 310 287 21 17 chr13 63529177 63529333 -56754979 + L1ME1 LINE L1 4226 4380 -1766 5 1069 416 264 94 16 chr13 63529368 63529495 -56754817 + ID_B1 SINE B4 84 220 -4 5 1069 1259 102 11 0 chr13 63529592 63529768 -56754544 + B2_Mm1t SINE B2 2 179 -14 5 1069 318 102 392 0 chr13 63529834 63529931 -56754381 + B2_Mm2 SINE B2 47 181 -14 5 1069 273 246 76 76 chr13 63529960 63530092 -56754220 + L1ME1 LINE L1 4541 4672 -1474 5 1069 300 150 105 0 chr13 63530109 63530183 -56754129 + L1ME1 LINE L1 5488 5568 -744 5 1069 686 257 80 33 chr13 63530232 63530534 -56753778 + L1ME1 LINE L1 5700 6015 -164 5 1069 216 341 49 0 chr13 63530665 63530747 -56753565 + B1_Mus2 SINE Alu 1 86 -61 5 1069 837 121 8 0 chr13 63530911 63531035 -56753277 + B1_Mur2 SINE Alu 9 133 -16 5 1069 493 266 60 110 chr13 63531552 63531852 -56752460 + B4A SINE B4 2 286 -6 5 1069 251 297 5 54 chr13 63532600 63532785 -56751527 + (CCCCG)n Simple_repeat Simple_repeat 5 180 0 5 1069 287 225 232 40 chr13 63533428 63533553 -56750759 - RSINE1 SINE B4 -14 151 3 6 1069 1159 21 0 82 chr13 63533654 63533813 -56750499 - B1_Mm SINE Alu -1 146 1 6 1069 693 147 62 0 chr13 63533938 63534067 -56750245 + RMER6B LTR ERVK 1 137 -324 6 1069 408 104 25 49 chr13 63534068 63534149 -56750163 + RMER6-int LTR ERVK 2632 2710 -467 6 1069 897 193 62 0 chr13 63534167 63534359 -56749953 + B3 SINE B2 11 214 -2 6 1069 243 0 0 0 chr13 63534649 63534676 -56749636 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1069 441 294 41 52 chr13 63536020 63536214 -56748098 - ORR1E LTR MaLR -167 192 1 6 1069 385 169 41 27 chr13 63536489 63536562 -56747750 - ID4 SINE ID -9 74 1 6 1069 372 325 118 30 chr13 63536705 63536908 -56747404 - MLT1D LTR MaLR 0 505 285 6 1069 533 244 50 19 chr13 63536925 63537084 -56747228 - MLT1D LTR MaLR -295 210 47 6 1069 201 121 0 0 chr13 63537257 63537290 -56747022 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1069 548 257 0 0 chr13 63537611 63537724 -56746588 - B1_Mur2 SINE Alu -32 117 5 7 1069 180 0 0 0 chr13 63537740 63537760 -56746552 + (T)n Simple_repeat Simple_repeat 1 20 0 7 1069 7619 38 1 0 chr13 63537772 63538663 -56745649 - L1Md_T LINE L1 0 6582 5691 7 1069 2517 30 3 0 chr13 63538654 63538955 -56745357 + L1_Mm LINE L1 5004 5305 -578 7 1069 36111 36 0 0 chr13 63538950 63544179 -56740133 + L1Md_T LINE L1 264 5589 -297 7 1069 9134 6 0 0 chr13 63544179 63545174 -56739138 + L1Md_T LINE L1 5590 6584 -1 7 1069 3673 12 0 0 chr13 63545443 63545849 -56738463 + L1_Mm LINE L1 5288 5693 -190 7 1069 425 296 84 13 chr13 63545952 63546183 -56738129 + Charlie8 DNA MER1_type 26 273 -2155 7 1069 587 257 175 60 chr13 63546238 63546490 -56737822 + B4A SINE B4 1 281 -11 7 1069 344 275 221 0 chr13 63546648 63546779 -56737533 + MER5A1 DNA MER1_type 1 160 -6 7 1069 185 300 57 0 chr13 63547264 63547334 -56736978 + L2a LINE L2 3103 3176 -250 7 1069 288 0 0 0 chr13 63548588 63548620 -56735692 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 7 1069 210 37 0 0 chr13 63549189 63549216 -56735096 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 1069 330 206 0 0 chr13 63549352 63549420 -56734892 - B1F SINE Alu -9 140 73 8 1069 3066 41 3 0 chr13 63549896 63550262 -56734050 - L1Md_F2 LINE L1 0 6582 6216 8 1069 277 316 25 0 chr13 63550327 63550406 -56733906 + ID4_ SINE ID 3 83 0 8 1069 781 240 78 9 chr13 63550907 63551270 -56733042 + L1MB7 LINE L1 5107 5491 -692 8 1069 1072 124 83 17 chr13 63551278 63551459 -56732853 + B2_Mm1t SINE B2 1 193 0 8 1069 598 220 175 37 chr13 63551479 63551668 -56732644 + B3 SINE B2 2 216 0 8 1069 200 233 0 0 chr13 63551677 63551720 -56732592 + A-rich Low_complexity Low_complexity 1 43 0 8 1069 183 156 0 0 chr13 63551813 63551845 -56732467 + GA-rich Low_complexity Low_complexity 3 34 0 8 1069 517 271 170 20 chr13 63551849 63552185 -56732127 + L1MB7 LINE L1 5660 6049 -1946 8 1069 250 219 61 30 chr13 63552724 63552790 -56731522 - L3 LINE CR1 -506 3983 3916 8 1069 359 300 41 8 chr13 63553457 63553578 -56730734 - PB1 SINE Alu -2 125 1 9 1069 653 216 7 22 chr13 63553715 63553852 -56730460 - RSINE1 SINE B4 -28 137 3 9 1069 335 197 26 0 chr13 63555543 63555619 -56728693 - PB1D7 SINE Alu -8 112 35 9 1069 451 158 0 0 chr13 63555981 63556057 -56728255 - B3 SINE B2 -6 210 135 9 1069 27 0 0 0 chr13 63556399 63556426 -56727886 + AT_rich Low_complexity Low_complexity 1 27 0 9 1069 443 261 0 0 chr13 63556468 63556560 -56727752 + PB1D9 SINE Alu 18 109 -11 9 1069 207 0 0 0 chr13 63556560 63556583 -56727729 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 9 1069 1183 62 0 20 chr13 63556757 63556906 -56727406 + B1_Mm SINE Alu 1 146 -1 9 1069 201 47 22 44 chr13 63556906 63556951 -56727361 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 9 1069 759 254 111 5 chr13 63557487 63557677 -56726635 - B3 SINE B2 -6 210 1 9 1069 456 217 0 0 chr13 63558276 63558359 -56725953 + B3 SINE B2 129 211 -5 1 1069 23 0 0 0 chr13 63558364 63558387 -56725925 + AT_rich Low_complexity Low_complexity 1 23 0 1 1069 1146 82 0 7 chr13 63558392 63558540 -56725772 + B1_Mus1 SINE Alu 2 148 0 1 1069 207 97 15 75 chr13 63558540 63558607 -56725705 + A-rich Low_complexity Low_complexity 4 66 0 1 1069 21 36 0 0 chr13 63558627 63558655 -56725657 + AT_rich Low_complexity Low_complexity 1 28 0 1 1069 1647 32 0 0 chr13 63558783 63558969 -56725343 - B2_Mm1a SINE B2 -6 187 2 1 1069 217 222 0 22 chr13 63559096 63559142 -56725170 + C-rich Low_complexity Low_complexity 2 46 0 1 1069 1049 216 35 0 chr13 63559260 63559459 -56724853 + B3 SINE B2 4 209 -7 1 1069 297 294 196 18 chr13 63560141 63560304 -56724008 + Tigger5 DNA MER2_type 2214 2405 -1 1 1069 2263 128 70 5 chr13 63560445 63560831 -56723481 + MTC LTR MaLR 3 413 -8 1 1069 573 291 211 3 chr13 63560835 63561199 -56723113 + MLT1D LTR MaLR 66 505 0 1 1069 344 258 170 52 chr13 63561363 63561498 -56722814 - RSINE1 SINE B4 -13 152 2 1 1069 1745 211 133 19 chr13 63561516 63561955 -56722357 + MT2A LTR ERVL 2 493 -40 1 1069 561 55 0 0 chr13 63561955 63562028 -56722284 + (CA)n Simple_repeat Simple_repeat 1 73 0 1 1069 1745 211 133 19 chr13 63562028 63562061 -56722251 + MT2A LTR ERVL 494 528 -5 1 1069 257 312 25 51 chr13 63562065 63562168 -56722144 + MER44B DNA MER2_type 34 133 -417 1 1069 2358 196 29 18 chr13 63562168 63562681 -56721631 - RMER5 LTR ERV1 0 534 16 1 1069 765 342 19 77 chr13 63562697 63563128 -56721184 + MER44B DNA MER2_type 132 537 -13 1 1069 319 275 154 23 chr13 63563428 63563603 -56720709 - MLT1D LTR MaLR -44 461 264 1 1069 236 211 17 17 chr13 63563737 63563795 -56720517 - ID4_ SINE ID -22 61 4 1 1069 533 196 6 0 chr13 63564078 63564183 -56720129 + (TG)n Simple_repeat Simple_repeat 1 106 0 1 1069 2680 58 3 0 chr13 63564183 63564509 -56719803 + ORR1A2 LTR MaLR 1 327 0 1 1069 533 196 6 0 chr13 63564509 63564576 -56719736 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1069 512 315 7 26 chr13 63564638 63564791 -56719521 - RSINE1 SINE B4 0 165 16 1 1069 585 0 0 0 chr13 63564817 63564882 -56719430 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1069 2949 54 5 3 chr13 63565076 63565447 -56718865 + Lx3_Mus LINE L1 6599 6970 -39 1 1069 282 221 14 14 chr13 63565672 63565741 -56718571 + ID_B1 SINE B4 149 217 -7 1 1069 576 234 57 0 chr13 63565870 63566011 -56718301 - B1F SINE Alu 0 149 1 1 1069 203 277 0 0 chr13 63566786 63566833 -56717479 + CT-rich Low_complexity Low_complexity 3 49 0 1 1069 258 276 0 13 chr13 63566908 63566985 -56717327 - RSINE1 SINE B4 -88 77 2 1 1069 584 248 81 0 chr13 63568285 63568434 -56715878 + Lx8 LINE L1 5633 5793 -1680 1 1069 1195 92 0 6 chr13 63568436 63568610 -56715702 + B2_Mm2 SINE B2 2 174 -21 1 1069 4039 284 106 44 chr13 63568612 63568944 -56715368 + Lx8 LINE L1 5785 6190 -1283 1 1069 441 0 0 0 chr13 63568944 63568993 -56715319 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 133 4039 284 106 44 chr13 63568993 63570242 -56714070 + Lx8 LINE L1 6191 7463 -10 1 1070 225 262 68 110 chr13 63571868 63571904 -56712408 + MT2B2 LTR ERVL 125 154 -430 1 1070 820 119 21 7 chr13 63571904 63572048 -56712264 + B1_Mus2 SINE Alu 2 147 0 1 1070 221 94 106 30 chr13 63572048 63572114 -56712198 + (TATATG)n Simple_repeat Simple_repeat 6 76 0 1 1070 384 188 40 50 chr13 63573172 63573273 -56711039 - B1_Mur4 SINE Alu -3 147 48 1 1070 200 35 35 0 chr13 63573494 63573523 -56710789 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 1 1070 838 129 0 41 chr13 63573523 63573668 -56710644 - B1_Mur3 SINE Alu -6 143 5 1 1070 517 253 26 13 chr13 63573707 63573863 -56710449 + MLT2B1 LTR ERVL 1 158 -362 1 1070 948 241 35 13 chr13 63573876 63574107 -56710205 + ORR1D2 LTR MaLR 1 236 -134 1 1070 326 23 0 23 chr13 63574114 63574158 -56710154 + (TTTTG)n Simple_repeat Simple_repeat 1 43 0 1 1070 382 215 52 70 chr13 63574544 63574574 -56709738 + ORR1D2 LTR MaLR 258 282 -88 1 1070 1246 167 47 0 chr13 63574574 63574789 -56709523 - URR1B DNA MER1_type 0 225 1 1 1070 382 215 52 70 chr13 63574789 63574873 -56709439 + ORR1D2 LTR MaLR 283 370 0 1 1070 1168 42 14 20 chr13 63575216 63575349 -56708963 + B1_Mus2 SINE Alu 2 134 -13 1 1070 216 0 0 0 chr13 63575349 63575373 -56708939 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1070 1168 42 14 20 chr13 63575373 63575386 -56708926 + B1_Mus2 SINE Alu 135 147 0 1 1070 1530 68 16 0 chr13 63575880 63576070 -56708242 - B2_Mm2 SINE B2 -2 193 1 1 1070 1188 62 0 0 chr13 63576202 63576348 -56707964 - B1_Mus2 SINE Alu 0 147 2 1 1070 356 319 92 54 chr13 63577969 63578213 -56706099 + ORR1E LTR MaLR 10 262 -108 1 1070 2694 141 53 52 chr13 63578507 63578598 -56705714 - RLTR20B3 LTR ERVK 0 577 484 1 1070 225 0 0 0 chr13 63578598 63578623 -56705689 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1070 2694 141 53 52 chr13 63578623 63579092 -56705220 - RLTR20B3 LTR ERVK -94 483 16 1 1070 883 276 131 12 chr13 63579353 63579690 -56704622 - MTEa LTR MaLR 0 379 3 1 1070 4029 270 62 79 chr13 63579692 63579884 -56704428 - MTEa-int LTR MaLR 0 1580 1395 1 1070 351 0 0 0 chr13 63579884 63579923 -56704389 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1070 1179 29 7 0 chr13 63579923 63580063 -56704249 - B1_Mus1 SINE Alu -3 145 5 1 1070 4029 270 62 79 chr13 63580063 63580934 -56703378 - MTEa-int LTR MaLR -186 1394 507 1 1070 1985 127 35 9 chr13 63580934 63581253 -56703059 - ORR1A2 LTR MaLR 0 327 1 1 1070 4029 270 62 79 chr13 63581253 63581332 -56702980 - MTEa-int LTR MaLR -1074 506 426 1 1070 3470 38 32 21 chr13 63581332 63581763 -56702549 + RLTR10C LTR ERVK 1 436 0 1 1070 4029 270 62 79 chr13 63581763 63582191 -56702121 - MTEa-int LTR MaLR -1155 425 35 1 1070 804 191 65 5 chr13 63582371 63582555 -56701757 + ORR1C2 LTR MaLR 190 384 0 1 1070 213 108 0 0 chr13 63582802 63582839 -56701473 + (ATG)n Simple_repeat Simple_repeat 3 39 0 1 1070 1411 87 16 0 chr13 63584022 63584205 -56700107 - B2_Mm2 SINE B2 -8 187 2 1 1070 282 364 12 0 chr13 63584552 63584663 -56699649 - B1F1 SINE Alu -1 119 7 1 1070 362 349 23 38 chr13 63585484 63585615 -56698697 - RSINE1 SINE B4 -3 162 34 1 1070 217 109 21 21 chr13 63588018 63588065 -56696247 + G-rich Low_complexity Low_complexity 1 47 0 1 1070 595 311 42 110 chr13 63589601 63590056 -56694256 - MLT-int LTR MaLR -10 1725 1302 1 1070 236 303 15 0 chr13 63591389 63591455 -56692857 + CT-rich Low_complexity Low_complexity 6 72 0 1 1070 600 299 18 78 chr13 63591949 63592285 -56692027 - MTEa LTR MaLR -52 327 1 1 1070 3139 293 100 32 chr13 63592287 63593540 -56690772 - MTE-int LTR MaLR -2 1578 241 1 1070 331 213 66 13 chr13 63593543 63593619 -56690693 + RSINE1 SINE B4 5 84 -81 1 1070 624 175 0 128 chr13 63593620 63593683 -56690629 - MTC LTR MaLR -278 143 88 1 1070 243 0 0 0 chr13 63593691 63593718 -56690594 + (CTTTG)n Simple_repeat Simple_repeat 3 29 0 1 1070 784 169 27 27 chr13 63593718 63593855 -56690457 - B1_Mur3 SINE Alu -8 141 3 1 1070 624 175 0 128 chr13 63593855 63593955 -56690357 - MTC LTR MaLR -334 87 1 1 1070 1023 246 77 115 chr13 63594081 63594229 -56690083 + MTEb LTR MaLR 3 132 -247 1 1070 1130 95 0 0 chr13 63594229 63594376 -56689936 + B1_Mus1 SINE Alu 1 147 -1 1 1070 1023 246 77 115 chr13 63594376 63594617 -56689695 + MTEb LTR MaLR 133 377 -2 1 1070 1022 306 58 36 chr13 63594621 63595089 -56689223 + MTEb-int LTR MaLR 3 480 -1100 1 1070 303 345 42 12 chr13 63595101 63595268 -56689044 - MTE-int LTR MaLR -1374 206 35 1 1070 855 151 0 112 chr13 63595311 63595490 -56688822 - ORR1C1 LTR MaLR -219 159 1 1 1070 443 229 32 25 chr13 63595494 63595651 -56688661 + L1MA6 LINE L1 6143 6300 0 1 1070 350 304 48 19 chr13 63595749 63595957 -56688355 + L1MC4 LINE L1 1264 1477 -4738 1 1070 237 192 19 0 chr13 63596197 63596249 -56688063 + L1MC4 LINE L1 1715 1767 -4448 1 1070 494 232 14 144 chr13 63596496 63596536 -56687776 + B3 SINE B2 3 40 -176 1 1070 1764 164 16 3 chr13 63596536 63596848 -56687464 + Lx LINE L1 6337 6652 -2 1 1070 494 232 14 144 chr13 63596848 63596953 -56687359 + B3 SINE B2 41 129 -87 1 1070 378 222 0 22 chr13 63597457 63597549 -56686763 + B3 SINE B2 124 213 -3 1 1070 437 167 62 0 chr13 63597592 63597688 -56686624 + B1_Mus2 SINE Alu 45 146 -1 1 1070 231 125 0 0 chr13 63598996 63599036 -56685276 + (TTC)n Simple_repeat Simple_repeat 1 40 0 1 1070 1435 89 21 0 chr13 63599430 63599621 -56684691 - B2_Mm2 SINE B2 0 195 1 1 1070 1237 40 0 0 chr13 63600506 63600654 -56683658 - B1_Mus1 SINE Alu 0 148 1 1 1070 1335 158 121 33 chr13 63600707 63601014 -56683298 - MTD LTR MaLR 0 419 86 1 1070 890 138 0 7 chr13 63601013 63601159 -56683153 - B1_Mur3 SINE Alu -3 146 2 1 1070 357 286 0 20 chr13 63601160 63601260 -56683052 - MTD LTR MaLR -321 98 1 1 1070 583 262 7 14 chr13 63601376 63601510 -56682802 + B1_Mus2 SINE Alu 1 135 -12 1 1070 243 0 0 0 chr13 63601510 63601537 -56682775 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 1 1070 583 262 7 14 chr13 63601537 63601549 -56682763 + B1_Mus2 SINE Alu 136 146 -1 1 1070 243 102 372 93 chr13 63601557 63601643 -56682669 + B3 SINE B2 105 214 -2 1 1070 270 301 36 0 chr13 63601696 63601779 -56682533 + MLT1E3 LTR MaLR 48 133 -491 1 1070 232 330 0 0 chr13 63601711 63601799 -56682513 + MLT2C1 LTR ERVL 45 132 -265 1 1070 970 217 17 98 chr13 63601891 63602126 -56682186 - B3 SINE B2 0 216 1 1 1070 1482 226 89 8 chr13 63602470 63602853 -56681459 - MTD LTR MaLR -5 414 1 1 1070 186 43 0 0 chr13 63602959 63602982 -56681330 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1 1070 710 204 30 0 chr13 63602982 63603114 -56681198 - B1_Mur2 SINE Alu -9 140 5 1 1070 1746 16 0 0 chr13 63603137 63603329 -56680983 - B2_Mm1a SINE B2 -1 192 1 1 1070 1494 59 11 0 chr13 63603333 63603520 -56680792 - B2_Mm1t SINE B2 -4 189 1 1 1070 272 0 0 73 chr13 63603596 63603637 -56680675 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1070 231 262 0 58 chr13 63604016 63604085 -56680227 - B3A SINE B2 -2 196 132 1 1070 1108 236 47 14 chr13 63604048 63604323 -56679989 - B4 SINE B4 0 292 9 1 1070 552 261 76 137 chr13 63604440 63604755 -56679557 + MER2 DNA MER2_type 18 313 -32 1 1070 462 284 41 71 chr13 63606238 63606435 -56677877 + RMER30 DNA MER1_type 5 195 -7 1 1070 202 179 36 0 chr13 63606973 63607029 -56677283 + GA-rich Low_complexity Low_complexity 2 59 0 1 1070 759 202 8 0 chr13 63607180 63607309 -56677003 + RSINE1 SINE B4 5 134 -31 1 1070 614 89 22 0 chr13 63607359 63607449 -56676863 + B1_Mur4 SINE Alu 59 150 0 1 1070 288 0 0 0 chr13 63607456 63607488 -56676824 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1 1070 429 294 59 0 chr13 63607876 63607995 -56676317 - B4 SINE B4 -165 127 2 2 1070 270 370 21 11 chr13 63608790 63608883 -56675429 - Cheshire DNA MER1_type -2144 276 183 2 1070 383 211 29 36 chr13 63609253 63609362 -56674950 - B3A SINE B2 -30 186 84 2 1070 24 32 0 0 chr13 63609967 63609998 -56674314 + AT_rich Low_complexity Low_complexity 1 31 0 2 1070 233 224 0 0 chr13 63610695 63610744 -56673568 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1070 213 39 0 0 chr13 63611769 63611795 -56672517 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1070 342 0 0 0 chr13 63613980 63614018 -56670294 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1070 277 314 0 0 chr13 63614537 63614607 -56669705 - ID4 SINE ID -7 76 7 2 1070 567 262 63 0 chr13 63618032 63618158 -56666154 + ID_B1 SINE B4 84 217 -7 2 1070 237 180 80 0 chr13 63618115 63618165 -56666147 + PB1D7 SINE Alu 67 120 0 2 1070 1186 75 0 0 chr13 63618244 63618390 -56665922 - B1_Mus2 SINE Alu 0 147 2 2 1070 311 207 92 108 chr13 63618979 63619109 -56665203 - B1_Mur2 SINE Alu 0 149 22 2 1070 321 328 79 9 chr13 63619039 63619153 -56665159 - ID_B1 SINE B4 -102 122 1 2 1070 279 326 104 15 chr13 63619633 63619767 -56664545 - B1_Mur4 SINE Alu -4 146 1 2 1070 730 288 25 10 chr13 63619767 63619847 -56664465 - ID SINE ID -141 83 1 2 1070 268 272 49 12 chr13 63619926 63620008 -56664304 + LTR37B LTR ERV1 6 90 -378 2 1070 516 209 16 65 chr13 63620025 63620148 -56664164 - B3 SINE B2 -15 201 85 2 1070 588 281 29 29 chr13 63620404 63620543 -56663769 + B4 SINE B4 136 274 -18 2 1070 336 256 17 0 chr13 63621982 63622154 -56662158 + (TG)n Simple_repeat Simple_repeat 2 176 0 2 1070 443 279 72 48 chr13 63622160 63622326 -56661986 - B4 SINE B4 0 292 123 2 1070 376 179 0 156 chr13 63622436 63622641 -56661671 + (CACAC)n Simple_repeat Simple_repeat 3 175 0 2 1070 415 297 85 79 chr13 63624746 63625051 -56659261 - B4A SINE B4 -19 273 3 2 1070 220 70 23 23 chr13 63625075 63625119 -56659193 + (GGGTG)n Simple_repeat Simple_repeat 3 46 0 2 1070 481 258 109 0 chr13 63628823 63628951 -56655361 + B3A SINE B2 1 142 -56 2 1070 398 20 0 19 chr13 63628952 63629004 -56655308 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1070 471 228 20 0 chr13 63629044 63629145 -56655167 + PB1D9 SINE Alu 5 107 -13 2 1070 402 21 0 0 chr13 63629152 63629199 -56655113 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 2 1070 441 220 75 57 chr13 63629228 63629334 -56654978 - B1_Mur1 SINE Alu -12 137 30 2 1070 205 182 0 0 chr13 63630177 63630221 -56654091 + A-rich Low_complexity Low_complexity 1 44 0 2 1070 234 224 61 0 chr13 63630644 63630693 -56653619 - MIRm SINE MIR -99 177 126 2 1070 382 289 129 29 chr13 63632510 63632649 -56651663 + RSINE1 SINE B4 11 163 -2 2 1070 237 234 149 0 chr13 63632822 63632916 -56651396 + L1MC1 LINE L1 6195 6302 -31 2 1070 426 248 277 7 chr13 63633216 63633383 -56650929 + B3 SINE B2 3 201 -15 2 1070 304 233 39 52 chr13 63633388 63633403 -56650909 + ID_B1 SINE B4 72 145 -77 2 1070 337 190 0 33 chr13 63633403 63633463 -56650849 + B1_Mus2 SINE Alu 2 59 -88 2 1070 348 161 0 0 chr13 63633471 63633533 -56650779 + (CAGAGA)n Simple_repeat Simple_repeat 1 62 0 2 1070 751 65 0 27 chr13 63633533 63633643 -56650669 + B1_Mur4 SINE Alu 43 149 -1 2 1070 411 107 0 0 chr13 63633643 63633718 -56650594 + (GA)n Simple_repeat Simple_repeat 1 75 0 2 1070 848 191 73 11 chr13 63635803 63635994 -56648318 - B3 SINE B2 -13 203 1 2 1070 390 21 0 0 chr13 63636176 63636223 -56648089 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1070 2067 174 205 23 chr13 63637682 63638160 -56646152 + RMER15 LTR ERVL 1 565 -10 2 1070 607 336 64 23 chr13 63638170 63638389 -56645923 + B4A SINE B4 65 292 0 2 1070 264 59 0 0 chr13 63638417 63638451 -56645861 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1070 200 176 0 38 chr13 63638455 63638508 -56645804 + (CAGAGA)n Simple_repeat Simple_repeat 6 56 0 2 1070 192 258 179 15 chr13 63641501 63641568 -56642744 + MER5A DNA MER1_type 109 186 -3 2 1070 180 0 0 0 chr13 63641636 63641656 -56642656 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1070 470 368 6 26 chr13 63641666 63641822 -56642490 - RSINE1 SINE B4 -10 155 3 2 1070 346 238 107 0 chr13 63643291 63643375 -56640937 + PB1D10 SINE Alu 24 116 -1 2 1070 233 270 111 51 chr13 63645035 63645152 -56639160 - MER92A LTR ERV1 -250 162 39 2 1070 687 286 144 16 chr13 63646749 63647005 -56637307 - MamRep434 DNA TcMar -129 297 9 2 1070 330 26 0 0 chr13 63647713 63647752 -56636560 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1070 592 176 258 0 chr13 63648670 63648829 -56635483 + B3 SINE B2 3 202 -14 2 1070 210 292 123 0 chr13 63650783 63650848 -56633464 + ID2 SINE ID 2 74 -9 2 1070 347 241 113 50 chr13 63651682 63651833 -56632479 - B3A SINE B2 -13 185 8 2 1070 21 0 0 0 chr13 63654468 63654489 -56629823 + AT_rich Low_complexity Low_complexity 1 21 0 2 1070 801 177 7 20 chr13 63654494 63654644 -56629668 + B1_Mur1 SINE Alu 2 149 0 2 1070 264 206 40 81 chr13 63654705 63654724 -56629588 + B1_Mur1 SINE Alu 79 149 0 2 1070 312 182 0 0 chr13 63654724 63654779 -56629533 + ID_B1 SINE B4 170 224 0 2 1070 306 0 0 0 chr13 63655414 63655448 -56628864 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1070 225 154 0 0 chr13 63656431 63656470 -56627842 + A-rich Low_complexity Low_complexity 1 39 0 2 1070 303 268 12 47 chr13 63657580 63657666 -56626646 - ID4_ SINE ID 0 83 1 2 1070 198 0 0 0 chr13 63661651 63661673 -56622639 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 2 1070 243 0 0 0 chr13 63662469 63662496 -56621816 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2 1070 230 246 33 0 chr13 63662768 63662829 -56621483 + ID4 SINE ID 2 64 -19 2 1070 203 161 179 36 chr13 63663378 63663462 -56620850 + MIRm SINE MIR 172 267 -9 2 1070 183 200 0 48 chr13 63663460 63663502 -56620810 + L2a LINE L2 3378 3417 -9 2 1070 342 0 0 0 chr13 63664089 63664127 -56620185 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1070 30 69 0 0 chr13 63664395 63664453 -56619859 + GC_rich Low_complexity Low_complexity 1 58 0 2 1070 197 65 32 0 chr13 63666452 63666483 -56617829 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1070 23 33 0 0 chr13 63666831 63666861 -56617451 + GC_rich Low_complexity Low_complexity 1 30 0 2 1070 240 100 0 0 chr13 63667256 63667296 -56617016 + (CTG)n Simple_repeat Simple_repeat 1 40 0 2 1070 185 132 26 0 chr13 63667550 63667588 -56616724 + GA-rich Low_complexity Low_complexity 1 39 0 2 1070 264 130 0 0 chr13 63667926 63667972 -56616340 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1070 23 33 0 0 chr13 63668399 63668429 -56615883 + AT_rich Low_complexity Low_complexity 1 30 0 2 1070 189 107 0 0 chr13 63669027 63669055 -56615257 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1070 310 241 50 12 chr13 63669055 63669135 -56615177 + HAL1-3A_ME LINE L1 2140 2222 -636 2 1070 226 293 8 47 chr13 63674519 63674648 -56609664 + CT-rich Low_complexity Low_complexity 4 127 0 2 1070 22 0 0 0 chr13 63674675 63674697 -56609615 + GC_rich Low_complexity Low_complexity 1 22 0 2 1070 322 21 43 0 chr13 63675341 63675388 -56608924 + (TTG)n Simple_repeat Simple_repeat 3 51 0 2 1070 21 0 0 0 chr13 63675948 63675969 -56608343 + AT_rich Low_complexity Low_complexity 1 21 0 2 1070 681 229 15 27 chr13 63676201 63676535 -56607777 + GA-rich Low_complexity Low_complexity 1 329 0 2 1070 667 239 74 55 chr13 63678501 63678718 -56605594 + ID_B1 SINE B4 2 222 -2 2 1070 342 267 136 50 chr13 63678769 63678821 -56605491 - MLT1B LTR MaLR -150 240 187 2 1070 1116 44 36 0 chr13 63678821 63678958 -56605354 - B1_Mus2 SINE Alu -4 143 2 2 1070 342 267 136 50 chr13 63678958 63679038 -56605274 - MLT1B LTR MaLR -204 186 86 2 1070 1404 45 85 0 chr13 63679038 63679055 -56605257 - B2_Mm1a SINE B2 0 193 177 2 1070 504 0 0 0 chr13 63679055 63679111 -56605201 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 2 1070 1404 45 85 0 chr13 63679111 63679270 -56605042 - B2_Mm1a SINE B2 -17 176 3 2 1070 342 267 136 50 chr13 63679270 63679357 -56604955 - MLT1B LTR MaLR -305 85 1 2 1070 189 0 0 0 chr13 63679599 63679620 -56604692 + (CTTG)n Simple_repeat Simple_repeat 1 21 0 2 1070 1154 64 0 0 chr13 63679621 63679762 -56604550 - B1_Mus1 SINE Alu -6 142 2 2 1070 199 235 37 56 chr13 63679831 63679885 -56604427 + MER5B DNA MER1_type 2 54 -124 2 1070 180 0 0 0 chr13 63679981 63680001 -56604311 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1070 388 328 64 0 chr13 63680587 63680712 -56603600 + RSINE1 SINE B4 31 163 -2 2 1070 263 191 0 0 chr13 63681118 63681165 -56603147 - MT2A LTR ERVL 0 533 487 2 1070 2373 198 45 2 chr13 63681219 63681684 -56602628 - MT2A LTR ERVL -44 489 5 2 1070 340 286 110 22 chr13 63681839 63681975 -56602337 - B1F1 SINE Alu -1 148 1 2 1070 346 157 152 33 chr13 63682005 63682097 -56602215 + PB1D10 SINE Alu 5 107 -10 2 1070 204 193 17 17 chr13 63682099 63682157 -56602155 + (TAAA)n Simple_repeat Simple_repeat 4 61 0 2 1070 234 296 82 74 chr13 63682199 63682334 -56601978 + MLT1J2 LTR MaLR 188 323 -125 2 1070 414 0 0 0 chr13 63682494 63682540 -56601772 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1070 2330 137 60 3 chr13 63682958 63683323 -56600989 + ORR1B1 LTR MaLR 1 386 -8 2 1070 246 109 83 42 chr13 63683364 63683412 -56600900 - MT2B LTR ERVL 0 584 535 2 1070 198 103 0 0 chr13 63683434 63683463 -56600849 + (CATATA)n Simple_repeat Simple_repeat 1 29 0 2 1070 717 223 70 32 chr13 63683497 63683705 -56600607 - MT2B LTR ERVL -29 572 404 2 1070 298 175 35 0 chr13 63683704 63683761 -56600551 + ORR1D1 LTR MaLR 287 345 -29 3 1070 1211 41 7 7 chr13 63683793 63683940 -56600372 - B1_Mm SINE Alu 0 147 1 3 1070 250 183 50 0 chr13 63683952 63684012 -56600300 + ORR1D1 LTR MaLR 312 374 0 3 1070 968 250 19 5 chr13 63684019 63684228 -56600084 - B3 SINE B2 -4 212 1 3 1070 590 150 10 20 chr13 63684414 63684516 -56599796 + B1_Mur2 SINE Alu 34 134 -15 3 1070 21 0 0 0 chr13 63684614 63684635 -56599677 + AT_rich Low_complexity Low_complexity 1 21 0 3 1070 1304 267 55 29 chr13 63684749 63685134 -56599178 - MTD LTR MaLR -7 412 18 3 1070 483 107 0 0 chr13 63685170 63685245 -56599067 + (CATA)n Simple_repeat Simple_repeat 2 76 0 3 1070 349 297 74 25 chr13 63685245 63685366 -56598946 + ID_B1 SINE B4 91 217 -7 3 1070 239 297 30 106 chr13 63685409 63685541 -56598771 - MLT1B LTR MaLR 0 390 269 3 1070 962 239 35 122 chr13 63685880 63686199 -56598113 + MTE2a LTR MaLR 1 291 -88 3 1070 226 330 136 36 chr13 63686883 63687103 -56597209 + MIRb SINE MIR 2 243 -25 3 1070 1071 132 189 5 chr13 63687274 63687465 -56596847 + URR1A DNA MER1_type 1 226 0 3 1070 583 249 0 54 chr13 63688012 63688160 -56596152 - ID_B1 SINE B4 -3 221 86 3 1070 641 221 128 31 chr13 63688331 63688400 -56595912 + B3 SINE B2 2 70 -146 3 1070 627 39 0 0 chr13 63688400 63688478 -56595834 + (CA)n Simple_repeat Simple_repeat 2 79 0 3 1070 641 221 128 31 chr13 63688478 63688604 -56595708 + B3 SINE B2 71 215 -1 3 1070 482 252 43 9 chr13 63688631 63688747 -56595565 + B4A SINE B4 4 123 -169 3 1070 659 197 146 14 chr13 63688973 63689146 -56595166 - MTD LTR MaLR -98 321 116 3 1070 180 214 0 0 chr13 63689590 63689646 -56594666 + (CTGTG)n Simple_repeat Simple_repeat 1 56 0 3 1070 440 301 53 32 chr13 63690555 63690744 -56593568 - MTEa LTR MaLR -3 376 184 3 1070 241 150 50 0 chr13 63690762 63690802 -56593510 - MTEa LTR MaLR -321 53 12 3 1070 1140 313 110 47 chr13 63690812 63691520 -56592792 - Lx8 LINE L1 -1018 6455 5703 3 1070 205 196 0 19 chr13 63691587 63691639 -56592673 + A-rich Low_complexity Low_complexity 3 53 0 3 1070 981 100 0 0 chr13 63691655 63691825 -56592487 + (TG)n Simple_repeat Simple_repeat 1 170 0 3 1070 210 121 0 0 chr13 63692622 63692655 -56591657 + B4A SINE B4 2 34 -258 3 1070 814 218 0 0 chr13 63692677 63692824 -56591488 + B1_Mm SINE Alu 1 147 0 3 1070 219 114 0 0 chr13 63692832 63692867 -56591445 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3 1070 2008 127 15 53 chr13 63692876 63693217 -56591095 + ORR1A4 LTR MaLR 1 328 -1 3 1070 1040 202 39 0 chr13 63693219 63693427 -56590885 + B3 SINE B2 1 216 0 3 1070 2336 190 15 10 chr13 63693464 63693874 -56590438 + MTC LTR MaLR 5 416 -5 3 1070 430 277 111 19 chr13 63693838 63694000 -56590312 + MER2 DNA MER2_type 162 338 -7 3 1070 207 0 0 0 chr13 63695117 63695140 -56589172 + (TAATG)n Simple_repeat Simple_repeat 5 27 0 3 1070 321 89 0 0 chr13 63695259 63695304 -56589008 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1070 201 152 0 0 chr13 63695821 63695844 -56588468 + T-rich Low_complexity Low_complexity 24 46 0 3 1070 793 200 14 14 chr13 63695844 63695991 -56588321 - B1_Mur1 SINE Alu 0 149 3 3 1070 201 152 0 0 chr13 63695991 63696013 -56588299 + T-rich Low_complexity Low_complexity 2 23 0 3 1070 295 89 18 18 chr13 63696220 63696277 -56588035 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1070 423 0 0 0 chr13 63697934 63697981 -56586331 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1070 523 216 35 18 chr13 63697985 63698098 -56586214 - RSINE1 SINE B4 -48 117 3 3 1070 879 246 61 24 chr13 63698099 63698311 -56586001 - B4A SINE B4 -62 230 11 3 1070 661 279 94 17 chr13 63698480 63698713 -56585599 - MER2 DNA MER2_type -73 272 22 3 1070 683 206 8 15 chr13 63698728 63698861 -56585451 + B1_Mur1 SINE Alu 17 148 -1 3 1070 775 208 6 31 chr13 63699021 63699180 -56585132 - MER20 DNA MER1_type -14 205 51 3 1070 657 223 0 39 chr13 63699293 63699447 -56584865 + B1_Mur2 SINE Alu 2 149 0 3 1070 741 272 37 26 chr13 63699475 63699664 -56584648 - B3A SINE B2 0 198 8 3 1070 359 253 0 46 chr13 63699773 63699860 -56584452 - RSINE1 SINE B4 0 165 83 3 1070 369 314 136 54 chr13 63700499 63700778 -56583534 + ORR1E LTR MaLR 53 354 -5 3 133 511 311 59 7 chr13 63700908 63701060 -56583252 + Tigger7 DNA MER2_type 9 168 -2323 3 1071 755 235 103 29 chr13 63701267 63701512 -56582800 + MER33 DNA MER1_type 2 255 -69 3 1071 226 226 0 0 chr13 63701536 63701589 -56582723 - L1MA9 LINE L1 -4 6308 6256 3 1071 277 175 159 0 chr13 63701673 63701736 -56582576 - ID4_ SINE ID 0 83 11 3 1071 259 335 142 28 chr13 63701765 63701977 -56582335 + MER106A DNA MER1_type 1 236 0 3 1071 339 286 167 25 chr13 63702129 63702333 -56581979 - LTR37B LTR ERV1 -65 403 171 3 1071 228 208 23 105 chr13 63702495 63702581 -56581731 - MTEa LTR MaLR -23 356 278 3 1071 679 272 148 27 chr13 63703029 63703286 -56581026 - MER121 Unknown Unknown -60 352 65 3 1071 537 196 0 0 chr13 63704308 63704405 -56579907 + MER94 DNA AcHobo 36 132 -2 3 1071 590 207 24 0 chr13 63704769 63704938 -56579374 + CT-rich Low_complexity Low_complexity 2 174 0 3 1071 294 243 27 0 chr13 63705597 63705671 -56578641 - MLT1M LTR MaLR -13 549 474 3 1071 1729 125 141 63 chr13 63705847 63706180 -56578132 - ORR1B2 LTR MaLR -8 359 1 3 1071 526 168 9 16 chr13 63706226 63706337 -56577975 - ORR1C2 LTR MaLR -1 383 255 3 1071 318 258 181 8 chr13 63706887 63707020 -56577292 - MLT1M LTR MaLR -369 303 148 3 1071 697 345 91 0 chr13 63707227 63707502 -56576810 + LTR16C LTR ERVL 178 477 -12 3 1071 491 322 19 62 chr13 63708317 63708479 -56575833 + RSINE1 SINE B4 11 165 0 3 1071 701 266 47 12 chr13 63708505 63708707 -56575605 + MLT2B2 LTR ERVL 1 211 -343 3 1071 838 269 60 50 chr13 63708707 63708989 -56575323 + B4A SINE B4 2 286 -6 3 1071 668 354 63 57 chr13 63708989 63709244 -56575068 + MLT2B2 LTR ERVL 212 461 -93 3 1071 320 328 87 8 chr13 63709216 63709342 -56574970 - RSINE1 SINE B4 -19 146 11 3 1071 251 310 51 34 chr13 63709370 63709425 -56574887 + MLT2B2 LTR ERVL 437 492 -63 3 1071 1179 141 0 45 chr13 63709425 63709625 -56574687 - B2_Mm2 SINE B2 -3 192 2 3 1071 279 246 0 0 chr13 63709625 63709686 -56574626 + MLT2B2 LTR ERVL 499 559 0 3 1071 509 219 280 0 chr13 63710299 63710452 -56573860 + ID_B1 SINE B4 29 224 0 3 1071 389 237 67 50 chr13 63710333 63710453 -56573859 + B1F SINE Alu 28 149 0 3 1071 218 114 62 25 chr13 63712000 63712081 -56572231 + CT-rich Low_complexity Low_complexity 1 84 0 3 1071 327 242 22 22 chr13 63712453 63712588 -56571724 + GA-rich Low_complexity Low_complexity 1 135 0 3 1071 185 211 18 0 chr13 63713752 63713809 -56570503 + GA-rich Low_complexity Low_complexity 1 58 0 3 1071 194 293 75 66 chr13 63713976 63714082 -56570230 + L3 LINE CR1 3032 3138 -1351 3 1071 2537 157 2 10 chr13 63714934 63715334 -56568978 + MTC LTR MaLR 21 417 -4 3 1071 5781 164 118 7 chr13 63715334 63716463 -56567849 + MTC-int LTR MaLR 1 1254 -4 3 1071 1405 197 116 54 chr13 63716467 63716548 -56567764 + MTC LTR MaLR 1 73 -348 3 1071 1327 44 70 22 chr13 63716548 63716733 -56567579 + B2_Mm2 SINE B2 1 194 -1 3 1071 1405 197 116 54 chr13 63716733 63717021 -56567291 + MTC LTR MaLR 74 393 -28 3 1071 387 0 0 0 chr13 63717025 63717068 -56567244 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1071 1050 232 92 103 chr13 63717105 63717485 -56566827 - MTE2a LTR MaLR -3 376 1 3 1071 203 179 0 0 chr13 63717507 63717546 -56566766 + A-rich Low_complexity Low_complexity 1 39 0 3 1071 232 324 82 34 chr13 63718214 63718361 -56565951 + MIR SINE MIR 104 257 -5 3 1071 2991 57 25 44 chr13 63719322 63719729 -56564583 + MTB LTR MaLR 2 400 0 3 1071 270 163 0 0 chr13 63720183 63720232 -56564080 + B3A SINE B2 1 49 -149 3 1071 291 286 0 25 chr13 63720368 63720447 -56563865 + CT-rich Low_complexity Low_complexity 4 80 0 3 1071 306 259 49 0 chr13 63720452 63720533 -56563779 - B1F2 SINE Alu -58 91 7 3 1071 230 344 33 0 chr13 63720460 63720550 -56563762 - ID_B1 SINE B4 -63 161 69 3 1071 484 320 156 20 chr13 63720580 63720978 -56563334 + L2 LINE L2 2402 2853 -566 3 1071 2585 167 49 104 chr13 63720993 63721023 -56563289 - RLTR20B1 LTR ERVK -7 556 523 3 1071 351 0 0 0 chr13 63721023 63721062 -56563250 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1071 387 0 0 0 chr13 63721062 63721104 -56563208 + (GA)n Simple_repeat Simple_repeat 1 43 0 3 1071 2585 167 49 104 chr13 63721104 63721189 -56563123 - RLTR20B1 LTR ERVK -41 522 457 3 1071 450 53 0 0 chr13 63721189 63721246 -56563066 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1071 2585 167 49 104 chr13 63721246 63721716 -56562596 - RLTR20B1 LTR ERVK -107 456 2 3 1071 283 266 13 0 chr13 63721899 63721978 -56562334 + L1M4 LINE L1 4621 4700 -1446 3 1071 379 295 45 8 chr13 63722047 63722262 -56562050 + MTEb LTR MaLR 2 288 -91 3 1071 423 0 0 0 chr13 63722358 63722405 -56561907 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1071 213 39 0 0 chr13 63723271 63723297 -56561015 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 3 1071 785 278 92 51 chr13 63723310 63723583 -56560729 + B4A SINE B4 5 288 -4 3 1071 555 230 0 19 chr13 63723783 63723999 -56560313 + GA-rich Low_complexity Low_complexity 1 212 0 3 1071 472 242 28 4 chr13 63724931 63725054 -56559258 + MTEa LTR MaLR 13 134 -245 3 1071 407 345 143 16 chr13 63724944 63725321 -56558991 + MT2A LTR ERVL 22 446 -87 3 1071 887 245 178 16 chr13 63725350 63725724 -56558588 - MT2A LTR ERVL -97 436 2 3 1071 309 333 49 21 chr13 63725872 63726016 -56558296 + Charlie8 DNA MER1_type 27 174 -2254 3 1071 1912 158 6 0 chr13 63726759 63727075 -56557237 + ORR1A3 LTR MaLR 1 318 -8 3 1071 548 264 117 7 chr13 63727366 63727511 -56556801 + RSINE1 SINE B4 4 164 -1 3 1071 826 194 7 0 chr13 63727954 63728093 -56556219 + B1_Mur2 SINE Alu 2 141 -8 3 1071 255 114 0 0 chr13 63728095 63728139 -56556173 + (GGA)n Simple_repeat Simple_repeat 3 46 0 3 1071 1022 103 29 0 chr13 63728236 63728411 -56555901 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1071 330 167 0 0 chr13 63728411 63728471 -56555841 + A-rich Low_complexity Low_complexity 1 60 0 4 1071 369 0 0 0 chr13 63728580 63728621 -56555691 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1071 183 80 0 0 chr13 63729595 63729620 -56554692 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1071 484 126 42 0 chr13 63730048 63730167 -56554145 + (TCTA)n Simple_repeat Simple_repeat 3 126 0 4 1071 576 91 76 3 chr13 63730200 63730490 -56553822 + (TCTA)n Simple_repeat Simple_repeat 1 311 0 4 1071 458 251 104 90 chr13 63730501 63730597 -56553715 - ID_B1 SINE B4 -19 205 113 4 1071 3442 25 5 0 chr13 63730597 63730989 -56553323 + MTA_Mm LTR MaLR 3 396 0 4 1071 458 251 104 90 chr13 63730989 63731093 -56553219 - ID_B1 SINE B4 -112 112 3 4 1071 285 75 0 0 chr13 63731138 63731178 -56553134 + (CAA)n Simple_repeat Simple_repeat 2 41 0 4 1071 336 281 10 50 chr13 63731179 63731280 -56553032 - B1F1 SINE Alu -52 97 1 4 1071 346 188 16 0 chr13 63731310 63731374 -56552938 - ID4_ SINE ID -17 66 2 4 1071 834 139 36 67 chr13 63731394 63731617 -56552695 - Lx9 LINE L1 -10 7634 7419 4 1071 2084 151 30 3 chr13 63731590 63731928 -56552384 - Lx9 LINE L1 -139 7505 7159 4 1071 286 298 46 52 chr13 63732676 63732815 -56551497 + MIRb SINE MIR 5 140 -68 4 1071 588 237 123 34 chr13 63733016 63733195 -56551117 - B3A SINE B2 -1 197 3 4 1071 486 296 0 59 chr13 63733600 63733769 -56550543 - L1MA8 LINE L1 -7 6284 6126 4 1071 328 257 84 4 chr13 63734183 63734334 -56549978 - Lx LINE L1 -765 5889 5691 4 1071 376 14 0 110 chr13 63734336 63734418 -56549894 + (TTTTTG)n Simple_repeat Simple_repeat 5 77 0 4 1071 530 252 37 7 chr13 63734418 63734554 -56549758 - B1F2 SINE Alu 0 149 10 4 1071 1104 254 31 88 chr13 63734563 63734766 -56549546 - Lx7 LINE L1 -1966 5730 5552 4 1071 1280 164 18 5 chr13 63734766 63734987 -56549325 - URR1B DNA MER1_type -1 224 1 4 1071 1104 252 35 92 chr13 63734987 63735234 -56549078 - Lx7 LINE L1 -329 5551 5302 4 1071 31 0 0 0 chr13 63735269 63735300 -56549012 + AT_rich Low_complexity Low_complexity 1 31 0 4 1071 207 0 0 0 chr13 63735342 63735365 -56548947 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1071 322 328 60 38 chr13 63735369 63735502 -56548810 - RSINE1 SINE B4 -26 139 4 4 1071 363 284 106 31 chr13 63735504 63735664 -56548648 + MER2 DNA MER2_type 109 280 -65 4 1071 434 270 81 0 chr13 63736213 63736324 -56547988 - ID_B1 SINE B4 -5 219 100 4 1071 518 286 239 30 chr13 63736342 63736677 -56547635 - MTD LTR MaLR -14 405 1 4 1071 29 0 0 0 chr13 63736692 63736721 -56547591 + AT_rich Low_complexity Low_complexity 1 29 0 4 1071 576 209 0 79 chr13 63737104 63737244 -56547068 - ORR1B1 LTR MaLR -265 129 1 4 1071 234 256 76 22 chr13 63737604 63737696 -56546616 + MTEb LTR MaLR 278 374 -5 4 1071 500 257 44 0 chr13 63739006 63739119 -56545193 + RSINE1 SINE B4 12 129 -36 4 1071 387 107 40 0 chr13 63739193 63739268 -56545044 + (GA)n Simple_repeat Simple_repeat 2 79 0 4 1071 819 49 7 2 chr13 63739293 63739427 -56544885 + MT2B LTR ERVL 20 156 -428 4 1071 278 185 36 36 chr13 63739404 63739460 -56544852 + B4 SINE B4 37 92 -200 4 1071 261 0 0 0 chr13 63739582 63739611 -56544701 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1071 243 331 53 6 chr13 63739617 63739787 -56544525 + Charlie2b DNA MER1_type 2021 2198 -584 4 1071 388 308 154 0 chr13 63740068 63740237 -56544075 + ID_B1 SINE B4 18 212 -12 4 1071 582 299 101 14 chr13 63740275 63740492 -56543820 + B4 SINE B4 2 237 -55 4 1071 287 192 0 0 chr13 63740520 63740572 -56543740 - B3A SINE B2 -144 54 3 4 1071 225 172 79 79 chr13 63740575 63740638 -56543674 + B4 SINE B4 226 288 -4 4 1071 330 280 38 102 chr13 63741713 63741891 -56542421 + B4A SINE B4 59 229 -63 4 1071 703 151 17 0 chr13 63741985 63742157 -56542155 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 4 1071 889 156 0 22 chr13 63742215 63742398 -56541914 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 4 1071 472 279 31 0 chr13 63742449 63742578 -56541734 + B1F SINE Alu 1 133 -16 4 1071 481 318 91 10 chr13 63742578 63742774 -56541538 + ID_B1 SINE B4 2 214 -10 4 1071 30 0 0 0 chr13 63743679 63743709 -56540603 + AT_rich Low_complexity Low_complexity 1 30 0 4 1071 273 57 0 0 chr13 63743715 63743750 -56540562 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1071 504 233 37 15 chr13 63743754 63743862 -56540450 - RSINE1 SINE B4 -25 140 33 4 1071 226 0 0 56 chr13 63743862 63743898 -56540414 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1071 504 233 37 15 chr13 63743898 63743924 -56540388 - RSINE1 SINE B4 -133 32 4 4 1071 216 0 0 0 chr13 63744239 63744263 -56540049 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1071 450 274 8 24 chr13 63745458 63745585 -56538727 + MLT1A1 LTR MaLR 19 143 -265 4 1071 323 264 57 74 chr13 63745610 63745786 -56538526 - Lx8 LINE L1 -1 7472 7300 4 1071 3302 247 34 36 chr13 63745815 63746667 -56537645 - Lx8 LINE L1 -360 7113 6264 4 1071 526 243 9 0 chr13 63747416 63747527 -56536785 + B3 SINE B2 30 141 -75 4 1071 651 249 5 111 chr13 63747527 63747735 -56536577 + Lx8 LINE L1 6468 6653 -820 4 1071 260 206 13 105 chr13 63747736 63747812 -56536500 + B3 SINE B2 148 216 0 4 1071 673 264 136 31 chr13 63748331 63748382 -56535930 - B4A SINE B4 0 292 249 4 1071 441 0 0 0 chr13 63748382 63748431 -56535881 + (TC)n Simple_repeat Simple_repeat 1 49 0 4 1071 673 264 136 31 chr13 63748431 63748637 -56535675 - B4A SINE B4 -44 248 9 4 1071 390 327 0 19 chr13 63748663 63748819 -56535493 + MER102b DNA MER1_type 56 208 -133 4 1071 443 251 233 15 chr13 63749148 63749330 -56534982 + B4A SINE B4 1 227 -65 4 1071 344 265 30 20 chr13 63749330 63749430 -56534882 + PB1D9 SINE Alu 1 101 -19 4 1071 331 213 119 32 chr13 63749880 63750006 -56534306 + MLT1A1 LTR MaLR 256 392 -16 4 1071 417 129 0 0 chr13 63750325 63750395 -56533917 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 1071 380 283 155 6 chr13 63750505 63750578 -56533734 + ID_B1 SINE B4 2 100 -124 4 1071 480 204 9 125 chr13 63750578 63750690 -56533622 + B1_Mur2 SINE Alu 1 99 -18 4 1071 246 291 0 37 chr13 63750765 63750847 -56533465 - BC1_Mm scRNA scRNA -58 94 16 4 1071 289 227 15 15 chr13 63750791 63750858 -56533454 - ID SINE ID -153 71 5 4 1071 279 311 91 46 chr13 63751730 63751905 -56532407 - HAL1 LINE L1 -2310 197 15 4 1071 345 272 36 59 chr13 63751984 63752147 -56532165 - MLT1A LTR MaLR -18 372 201 4 1071 561 255 7 7 chr13 63752225 63752363 -56531949 - ID_B1 SINE B4 -3 221 84 4 1071 324 358 100 64 chr13 63752618 63753087 -56531225 + L1M5 LINE L1 4809 5294 -852 4 1071 376 253 0 0 chr13 63753090 63753169 -56531143 - B3 SINE B2 -136 80 2 4 1071 837 252 74 5 chr13 63753222 63753425 -56530887 + ID_B1 SINE B4 1 217 -7 4 1071 294 98 0 0 chr13 63753427 63753478 -56530834 + (ACTG)n Simple_repeat Simple_repeat 3 53 0 4 1071 22 0 0 0 chr13 63754499 63754521 -56529791 + AT_rich Low_complexity Low_complexity 1 22 0 4 1071 210 250 111 0 chr13 63754526 63754598 -56529714 - RSINE1 SINE B4 -4 161 82 4 1071 875 213 43 29 chr13 63754599 63754807 -56529505 - B3 SINE B2 -4 212 2 4 1071 27 29 0 0 chr13 63755012 63755046 -56529266 + AT_rich Low_complexity Low_complexity 1 34 0 4 1071 730 253 184 0 chr13 63755430 63755675 -56528637 - B4A SINE B4 -1 291 2 4 1071 785 220 26 61 chr13 63755927 63756155 -56528157 - MER58A DNA MER1_type -3 221 2 4 1071 244 357 38 6 chr13 63756200 63756358 -56527954 - MLT1D LTR MaLR -66 439 277 4 1071 692 254 99 5 chr13 63756436 63756638 -56527674 - ID_B1 SINE B4 0 224 4 4 1071 354 23 0 0 chr13 63757508 63757551 -56526761 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 4 1071 219 114 0 0 chr13 63757551 63757586 -56526726 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1071 497 286 0 8 chr13 63757609 63757736 -56526576 - RSINE1 SINE B4 -37 128 3 4 1071 223 265 14 69 chr13 63757878 63757977 -56526335 - L2a LINE L2 -58 3368 3235 4 1071 239 261 229 8 chr13 63758880 63759011 -56525301 - RSINE1 SINE B4 -2 163 4 4 1071 246 214 0 67 chr13 63760094 63760154 -56524158 - ID4_ SINE ID -25 58 3 4 1071 978 212 6 16 chr13 63760599 63760781 -56523531 - B3 SINE B2 0 216 37 4 1071 576 247 119 16 chr13 63761576 63761769 -56522543 - ID_B1 SINE B4 0 224 12 4 1071 1362 87 11 5 chr13 63762795 63762981 -56521331 - B2_Mm1t SINE B2 -6 187 1 4 1071 258 307 52 9 chr13 63764121 63764236 -56520076 - ORR1E LTR MaLR -239 120 1 4 1071 451 288 0 0 chr13 63764279 63764397 -56519915 + B3A SINE B2 1 118 -80 4 1071 276 228 0 0 chr13 63764570 63764627 -56519685 - B1_Mus2 SINE Alu -89 58 2 4 1071 550 291 50 144 chr13 63764638 63765244 -56519068 - L1MC LINE L1 -1383 4763 4247 4 1071 444 321 74 46 chr13 63765244 63765528 -56518784 - B4A SINE B4 0 292 1 4 1071 550 291 50 144 chr13 63765528 63765879 -56518433 - L1MC LINE L1 -1900 4246 3897 4 1071 265 289 41 10 chr13 63765900 63765998 -56518314 - MLT1J LTR MaLR -300 212 112 4 1071 654 251 93 23 chr13 63766046 63766262 -56518050 + B4A SINE B4 3 233 -59 4 1071 351 0 0 0 chr13 63766288 63766327 -56517985 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1071 482 272 6 53 chr13 63766870 63767041 -56517271 - RSINE1 SINE B4 0 165 3 4 1071 716 212 159 96 chr13 63767778 63768049 -56516263 - B4A SINE B4 0 292 5 4 1071 357 197 0 0 chr13 63768110 63768186 -56516126 + GA-rich Low_complexity Low_complexity 3 78 0 4 1071 247 260 8 8 chr13 63768787 63768911 -56515401 + GA-rich Low_complexity Low_complexity 3 126 0 4 1071 336 24 0 0 chr13 63769820 63769861 -56514451 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1071 601 224 40 57 chr13 63771426 63771601 -56512711 - B3A SINE B2 -10 188 17 4 1071 319 287 65 27 chr13 63771614 63771800 -56512512 - L1M5 LINE L1 -3058 3088 2896 4 1071 356 273 151 39 chr13 63771880 63772059 -56512253 + B4A SINE B4 1 199 -93 5 1071 550 222 0 13 chr13 63773155 63773389 -56510923 + (TG)n Simple_repeat Simple_repeat 1 230 0 5 1071 400 226 0 0 chr13 63773417 63773501 -56510811 + B3 SINE B2 24 107 -109 5 1071 613 150 0 0 chr13 63773501 63773601 -56510711 - PB1D9 SINE Alu -19 101 2 5 1071 300 244 73 40 chr13 63774413 63774537 -56509775 - MTEb LTR MaLR -1 378 251 5 1071 326 255 126 10 chr13 63774567 63774670 -56509642 - B3 SINE B2 -22 194 80 5 1071 617 284 30 35 chr13 63775548 63775749 -56508563 - ID_B1 SINE B4 -24 200 1 5 1071 376 310 82 50 chr13 63776171 63776490 -56507822 + MLT1A LTR MaLR 46 374 0 5 1071 831 259 25 64 chr13 63777240 63777599 -56506713 + RLTR15 LTR ERVK 1 345 -14 5 1071 1048 291 21 4 chr13 63778513 63778792 -56505520 + B4 SINE B4 2 285 -7 5 1071 241 232 159 0 chr13 63779167 63779236 -56505076 - MLT1I LTR MaLR -288 123 44 5 1071 423 0 0 0 chr13 63779412 63779459 -56504853 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 5 1071 621 167 55 8 chr13 63779459 63779586 -56504726 + ID_B1 SINE B4 92 224 0 5 1071 605 235 52 12 chr13 63779590 63779893 -56504419 + MTD LTR MaLR 1 419 0 5 1071 1396 191 222 28 chr13 63779893 63780330 -56503982 + MTD-int LTR MaLR 1 522 -736 5 1071 286 329 0 68 chr13 63780345 63780433 -56503879 + MTE2a LTR MaLR 194 275 -104 5 1071 440 281 181 0 chr13 63780433 63780596 -56503716 - B4A SINE B4 -91 201 7 5 1071 195 294 55 34 chr13 63780672 63780829 -56503483 + MIR SINE MIR 10 168 -100 5 1071 244 191 235 0 chr13 63781021 63781089 -56503223 + MTEb LTR MaLR 10 93 -286 5 1071 724 231 82 50 chr13 63781097 63781279 -56503033 + B3A SINE B2 7 194 -4 5 1071 664 255 13 19 chr13 63781271 63781427 -56502885 + MTEb LTR MaLR 164 318 -61 5 1071 670 167 126 22 chr13 63781506 63781519 -56502793 - B1_Mur4 SINE Alu 0 150 138 5 1071 198 0 0 0 chr13 63781519 63781541 -56502771 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 5 1071 670 167 126 22 chr13 63781541 63781662 -56502650 - B1_Mur4 SINE Alu -13 137 2 5 1071 249 33 0 0 chr13 63781674 63781704 -56502608 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 5 1071 545 332 14 24 chr13 63782004 63782208 -56502104 + B4A SINE B4 8 209 -83 5 1071 963 236 98 105 chr13 63782208 63782624 -56501688 + MT2A LTR ERVL 1 540 -61 5 1071 816 75 27 13 chr13 63782625 63782774 -56501538 + (TCTA)n Simple_repeat Simple_repeat 2 152 0 5 1071 3185 43 10 0 chr13 63782774 63783165 -56501147 - MTB LTR MaLR -5 395 1 5 1071 214 95 48 0 chr13 63783165 63783207 -56501105 + (TCTA)n Simple_repeat Simple_repeat 4 47 0 5 1071 258 140 77 39 chr13 63783228 63783280 -56501032 + MT2A LTR ERVL 548 601 0 5 1071 270 81 0 0 chr13 63783376 63783413 -56500899 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1071 410 200 134 21 chr13 63783479 63783576 -56500736 - PB1D10 SINE Alu -4 113 6 5 1071 21 0 0 0 chr13 63783734 63783755 -56500557 + GC_rich Low_complexity Low_complexity 1 21 0 5 1071 202 293 0 65 chr13 63783829 63783891 -56500421 - MIR SINE MIR -148 114 57 5 1071 627 273 32 99 chr13 63784342 63784655 -56499657 + B4 SINE B4 1 292 0 5 1071 243 0 0 0 chr13 63784668 63784695 -56499617 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1071 312 27 0 0 chr13 63784695 63784732 -56499580 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1071 507 259 54 36 chr13 63784758 63784926 -56499386 - B4A SINE B4 -113 179 9 5 1071 253 231 19 0 chr13 63785202 63785254 -56499058 + (CAT)n Simple_repeat Simple_repeat 2 54 0 5 1071 486 232 0 0 chr13 63785257 63785395 -56498917 + (CCA)n Simple_repeat Simple_repeat 1 138 0 5 1071 537 316 0 6 chr13 63785431 63785606 -56498706 + (CCA)n Simple_repeat Simple_repeat 1 174 0 5 1071 1058 180 79 0 chr13 63785837 63786026 -56498286 + B3 SINE B2 2 205 -11 5 1071 860 217 17 0 chr13 63787314 63787489 -56496823 + B3A SINE B2 3 180 -18 5 1071 973 219 0 0 chr13 63787660 63787824 -56496488 + B3 SINE B2 1 164 -52 5 1071 297 89 0 0 chr13 63787824 63787869 -56496443 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1071 804 251 69 27 chr13 63787869 63787892 -56496420 + B3A SINE B2 177 196 -2 5 1071 983 84 0 7 chr13 63788304 63788448 -56495864 + (TTTCC)n Simple_repeat Simple_repeat 3 145 0 5 1071 186 43 0 0 chr13 63789229 63789252 -56495060 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 5 1071 844 238 135 5 chr13 63789287 63789502 -56494810 - B4 SINE B4 -48 244 2 5 1071 1895 143 73 18 chr13 63789683 63790011 -56494301 - ORR1B1 LTR MaLR -8 386 41 5 1071 232 203 220 0 chr13 63790084 63790143 -56494169 - B3 SINE B2 -143 73 2 5 1071 180 97 0 0 chr13 63790164 63790195 -56494117 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1071 548 222 8 49 chr13 63790239 63790362 -56493950 + PB1D9 SINE Alu 1 118 -2 5 1071 229 74 0 93 chr13 63790363 63790438 -56493874 + A-rich Low_complexity Low_complexity 1 68 0 5 1071 737 63 207 0 chr13 63790519 63790630 -56493682 - B1_Mus1 SINE Alu 0 148 15 5 1071 611 270 0 8 chr13 63790618 63790745 -56493567 - B1F SINE Alu -17 132 7 5 1071 1225 267 29 20 chr13 63790886 63791230 -56493082 - RMER5 LTR ERV1 -156 378 32 5 1071 634 264 45 0 chr13 63792340 63792495 -56491817 + RSINE1 SINE B4 3 164 -1 5 1071 750 211 0 0 chr13 63792606 63792786 -56491526 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1071 260 290 188 43 chr13 63793127 63793383 -56490929 - L1M5 LINE L1 -475 5765 5473 5 1071 252 316 79 60 chr13 63793501 63793729 -56490583 - L2a LINE L2 -3 3423 3135 5 1071 699 157 69 23 chr13 63794390 63794520 -56489792 + B1_Mur1 SINE Alu 12 147 -2 5 1071 283 339 39 49 chr13 63794511 63794716 -56489596 - LTR37A LTR ERV1 -16 410 208 5 1071 369 0 0 0 chr13 63794765 63794806 -56489506 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1071 328 269 184 50 chr13 63794927 63795068 -56489244 - RSINE1 SINE B4 -2 163 4 5 1071 505 262 53 40 chr13 63795454 63795537 -56488775 + B3A SINE B2 2 82 -116 5 1071 216 0 0 0 chr13 63795537 63795561 -56488751 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1071 505 262 53 40 chr13 63795561 63795628 -56488684 + B3A SINE B2 83 154 -44 5 1071 432 0 0 0 chr13 63795628 63795676 -56488636 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1071 332 354 134 19 chr13 63796070 63796286 -56488026 - LTR33C LTR ERVL -81 548 308 5 1071 817 307 44 0 chr13 63796531 63796736 -56487576 - ID_B1 SINE B4 -9 215 2 5 1071 227 289 0 0 chr13 63796875 63796972 -56487340 + (TTATA)n Simple_repeat Simple_repeat 1 97 0 5 1071 319 231 15 0 chr13 63797087 63797152 -56487160 + PB1D10 SINE Alu 41 106 -11 5 1071 205 175 0 0 chr13 63797349 63797389 -56486923 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1071 324 0 0 0 chr13 63798012 63798048 -56486264 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1071 1023 64 0 0 chr13 63798048 63798187 -56486125 + (GA)n Simple_repeat Simple_repeat 2 141 0 5 1071 323 308 58 33 chr13 63798391 63798512 -56485800 - HAL1-3A_ME LINE L1 -451 2407 2284 5 1071 363 176 11 21 chr13 63798515 63798608 -56485704 + CT-rich Low_complexity Low_complexity 1 92 0 5 1071 453 288 98 20 chr13 63798722 63798977 -56485335 - Lx9 LINE L1 -18 7626 7352 5 1071 2740 139 12 0 chr13 63799123 63799539 -56484773 + MTC LTR MaLR 1 421 0 5 1071 1043 221 148 49 chr13 63800188 63800224 -56484088 - MT2A LTR ERVL -2 599 549 5 1071 573 15 0 0 chr13 63800224 63800290 -56484022 + (TC)n Simple_repeat Simple_repeat 2 67 0 5 1071 1319 202 186 80 chr13 63800290 63800689 -56483623 - MT2A LTR ERVL -53 548 1 5 1071 950 159 10 91 chr13 63801287 63801495 -56482817 + B3A SINE B2 1 191 -7 5 1071 312 27 0 0 chr13 63801520 63801557 -56482755 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 5 1071 871 125 24 36 chr13 63801560 63801722 -56482590 - B2_Mm2 SINE B2 -36 180 2 5 1071 735 271 148 40 chr13 63803502 63803725 -56480587 + B4 SINE B4 46 292 0 5 1071 213 224 0 0 chr13 63803732 63803790 -56480522 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1071 273 217 14 28 chr13 63803811 63803882 -56480430 + (CATA)n Simple_repeat Simple_repeat 2 71 0 5 1071 504 240 0 0 chr13 63803882 63804061 -56480251 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 1071 299 231 8 0 chr13 63804104 63804238 -56480074 + (CA)n Simple_repeat Simple_repeat 2 136 0 5 1071 323 219 27 14 chr13 63804241 63804315 -56479997 + HAL1-3A_ME LINE L1 1976 2050 -808 5 1071 229 264 160 76 chr13 63804861 63804980 -56479332 - MIRb SINE MIR -117 151 23 5 1071 634 251 40 47 chr13 63805013 63805249 -56479063 - MIR SINE MIR -13 255 29 5 1071 191 333 0 48 chr13 63805374 63805437 -56478875 - L2b LINE L2 -302 3073 3014 5 1071 334 349 105 48 chr13 63805556 63805956 -56478356 - MLT1M LTR MaLR -210 462 40 5 1071 482 383 84 55 chr13 63806089 63806542 -56477770 - LTR33 LTR ERVL -12 503 38 5 1071 758 297 85 47 chr13 63806689 63806947 -56477365 - B4A SINE B4 -17 275 8 5 1071 279 0 0 0 chr13 63808190 63808221 -56476091 + (TC)n Simple_repeat Simple_repeat 1 31 0 5 1071 396 0 0 0 chr13 63808221 63808264 -56476048 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1071 657 281 107 33 chr13 63808355 63808627 -56475685 - B4A SINE B4 0 292 1 5 1071 3396 43 2 0 chr13 63808666 63809061 -56475251 - MTA_Mm LTR MaLR 0 396 1 5 1071 461 302 15 8 chr13 63809761 63809891 -56474421 + MTEa LTR MaLR 249 379 0 5 1071 236 357 0 57 chr13 63810294 63810463 -56473849 - L2a LINE L2 0 3426 3218 5 1071 267 319 41 41 chr13 63810848 63810862 -56473450 + CYRA11_Mm Unknown Y-chromosome 158 276 -339 5 1071 418 208 29 38 chr13 63810862 63810967 -56473345 - URR1B DNA MER1_type -1 224 121 5 1071 432 176 120 11 chr13 63810964 63811056 -56473256 - MT2A LTR ERVL -431 102 1 5 1071 840 224 20 40 chr13 63811127 63811327 -56472985 - B3A SINE B2 -1 197 2 5 1071 383 291 124 58 chr13 63811669 63811943 -56472369 - B4 SINE B4 0 292 1 6 1071 277 300 43 32 chr13 63812899 63812992 -56471320 + MTEb LTR MaLR 272 365 -14 6 1071 507 280 19 0 chr13 63813017 63813124 -56471188 + B3 SINE B2 107 215 -1 6 1071 894 167 14 0 chr13 63813128 63813272 -56471040 + B1_Mus1 SINE Alu 1 146 -2 6 1071 308 24 0 24 chr13 63813272 63813314 -56470998 + (TAA)n Simple_repeat Simple_repeat 2 42 0 6 1071 262 271 28 14 chr13 63813538 63813609 -56470703 + ID4_ SINE ID 10 81 -2 6 1071 454 226 161 0 chr13 63813548 63813672 -56470640 + ID_B1 SINE B4 11 154 -70 6 1071 1199 256 148 8 chr13 63814069 63814435 -56469877 + MTD LTR MaLR 3 419 0 6 1071 927 199 97 0 chr13 63814529 63814725 -56469587 + B3 SINE B2 1 215 -1 6 1071 450 0 0 0 chr13 63815032 63815082 -56469230 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 1071 782 136 80 0 chr13 63815171 63815296 -56469016 + B1_Mm SINE Alu 13 147 0 6 1071 876 256 49 64 chr13 63815296 63815563 -56468749 - B4A SINE B4 -28 264 2 6 1071 192 111 0 0 chr13 63816211 63816247 -56468065 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 6 1071 279 0 0 0 chr13 63816247 63816278 -56468034 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 6 1071 244 314 152 19 chr13 63816822 63817079 -56467233 + L1MA5A LINE L1 6010 6300 0 6 1071 1147 62 14 0 chr13 63817082 63817227 -56467085 + B1_Mus1 SINE Alu 1 147 -1 6 1071 327 250 0 0 chr13 63817244 63817304 -56467008 + ID4_ SINE ID 21 80 -3 6 1071 229 246 18 0 chr13 63817253 63817310 -56467002 + B4 SINE B4 31 88 -204 6 1071 368 214 74 79 chr13 63817349 63817422 -56466890 + B4 SINE B4 2 86 -138 6 1071 248 200 162 91 chr13 63817422 63817521 -56466791 + B3 SINE B2 2 107 -109 6 1071 1462 265 70 53 chr13 63817624 63818209 -56466103 + Lx8 LINE L1 6879 7473 0 6 1071 366 272 60 26 chr13 63818668 63818785 -56465527 - MIRc SINE MIR -50 218 98 6 1071 623 256 29 0 chr13 63818785 63818957 -56465355 + L1MA7 LINE L1 6115 6291 0 6 1071 24 53 0 0 chr13 63819030 63819068 -56465244 + AT_rich Low_complexity Low_complexity 1 38 0 6 1071 568 202 39 0 chr13 63819071 63819175 -56465137 + RSINE1 SINE B4 2 109 -56 6 1071 207 0 0 0 chr13 63819215 63819238 -56465074 + (CA)n Simple_repeat Simple_repeat 2 24 0 6 1071 379 274 32 0 chr13 63819394 63819489 -56464823 + B1F SINE Alu 1 98 -51 6 1071 250 200 36 0 chr13 63819507 63819562 -56464750 + GA-rich Low_complexity Low_complexity 2 58 0 6 1071 571 272 12 30 chr13 63819695 63819862 -56464450 - RSINE1 SINE B4 0 165 2 6 1071 791 186 0 8 chr13 63819876 63820006 -56464306 - B1_Mur1 SINE Alu -20 129 1 6 1071 213 220 20 20 chr13 63820006 63820049 -56464263 - RSINE1 SINE B4 -121 44 2 6 1071 261 0 0 0 chr13 63820089 63820118 -56464194 + (TTTTTG)n Simple_repeat Simple_repeat 3 31 0 6 1071 414 278 26 9 chr13 63820139 63820255 -56464057 - B1F SINE Alu -29 120 3 6 1071 225 322 158 59 chr13 63820442 63820594 -56463718 + MER20 DNA MER1_type 2 168 -51 6 1071 36 0 0 0 chr13 63823330 63823366 -56460946 + AT_rich Low_complexity Low_complexity 1 36 0 6 1071 189 0 0 0 chr13 63823419 63823440 -56460872 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 1071 660 26 0 0 chr13 63823801 63823879 -56460433 + (TC)n Simple_repeat Simple_repeat 2 79 0 6 1071 459 0 0 0 chr13 63826793 63826844 -56457468 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1071 396 111 0 0 chr13 63826844 63826916 -56457396 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 1071 1390 155 23 0 chr13 63827758 63827977 -56456335 + URR1B DNA MER1_type 2 225 0 6 1071 743 247 164 4 chr13 63828148 63828392 -56455920 + B4A SINE B4 4 286 -6 6 1071 428 368 114 10 chr13 63828701 63829000 -56455312 - MLT1K LTR MaLR -42 553 224 6 1071 407 287 137 17 chr13 63829746 63829863 -56454449 + RSINE1 SINE B4 2 132 -33 6 1071 227 31 31 0 chr13 63830058 63830090 -56454222 + (GA)n Simple_repeat Simple_repeat 1 33 0 6 1071 299 301 63 31 chr13 63830108 63830235 -56454077 + B3A SINE B2 64 194 -4 6 1071 315 333 22 44 chr13 63830268 63830403 -56453909 + MIRc SINE MIR 123 254 -14 6 1071 310 329 82 23 chr13 63830611 63830782 -56453530 + MIR SINE MIR 8 188 -74 6 1071 432 0 0 0 chr13 63831040 63831088 -56453224 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1071 625 267 123 64 chr13 63831796 63832016 -56452296 + B4A SINE B4 58 290 -2 6 1072 388 294 67 20 chr13 63832068 63832217 -56452095 - MLT1J LTR MaLR -351 161 6 6 1072 234 0 0 0 chr13 63832397 63832423 -56451889 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1072 258 267 0 0 chr13 63832457 63832502 -56451810 - ID4 SINE ID -38 45 1 6 1072 212 281 23 143 chr13 63832589 63832629 -56451683 + PB1D10 SINE Alu 1 117 0 6 1072 315 247 32 86 chr13 63832629 63832722 -56451590 + ID_B1 SINE B4 137 224 0 6 1072 389 320 10 0 chr13 63833378 63833481 -56450831 + PB1D10 SINE Alu 9 112 -5 6 1072 456 319 136 59 chr13 63834109 63834396 -56449916 - MLT1J LTR MaLR -160 352 44 6 1072 513 0 0 0 chr13 63835341 63835398 -56448914 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 1072 378 0 0 0 chr13 63835398 63835439 -56448873 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1072 864 181 0 32 chr13 63836022 63836176 -56448136 - B1_Mur2 SINE Alu 0 149 1 6 1072 1215 62 0 0 chr13 63836299 63836445 -56447867 + B1_Mus1 SINE Alu 3 148 0 6 1072 186 71 0 0 chr13 63836445 63836473 -56447839 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6 1072 1331 13 0 6 chr13 63836563 63836721 -56447591 + (GGGAGA)n Simple_repeat Simple_repeat 4 160 0 6 1072 180 111 0 0 chr13 63837804 63837831 -56446481 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 6 1072 282 201 86 40 chr13 63837837 63837962 -56446350 - L1MA5 LINE L1 -36 6255 6133 6 1072 706 231 6 48 chr13 63837966 63838013 -56446299 - B3A SINE B2 0 198 159 6 1072 321 26 0 0 chr13 63838013 63838051 -56446261 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1072 706 231 6 48 chr13 63838051 63838171 -56446141 - B3A SINE B2 -40 158 38 6 1072 2136 101 3 18 chr13 63838171 63838287 -56446025 - ORR1A4 LTR MaLR 0 329 219 6 1072 2369 112 12 0 chr13 63838287 63838610 -56445702 + ORR1A2 LTR MaLR 1 327 0 6 1072 2136 101 3 18 chr13 63838610 63838827 -56445485 - ORR1A4 LTR MaLR -111 218 1 6 1072 260 350 0 46 chr13 63839057 63839165 -56445147 + MLT1L LTR MaLR 287 389 -221 6 1072 228 86 0 0 chr13 63840233 63840268 -56444044 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 6 1072 605 168 31 16 chr13 63840281 63840408 -56443904 - B1_Mur3 SINE Alu 0 149 21 6 1072 229 216 19 19 chr13 63841352 63841404 -56442908 - MLT1L LTR MaLR -67 543 492 6 1072 767 239 62 105 chr13 63841465 63841769 -56442543 + MTE2b LTR MaLR 1 291 -88 6 1072 254 300 29 0 chr13 63841773 63841843 -56442469 + MTE2b LTR MaLR 16 87 -292 6 1072 525 208 66 9 chr13 63841916 63842053 -56442259 + MTE2b LTR MaLR 233 377 -2 6 1072 291 54 0 0 chr13 63842183 63842220 -56442092 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 6 1072 240 56 108 27 chr13 63843117 63843191 -56441121 + A-rich Low_complexity Low_complexity 2 81 0 6 1072 225 0 0 0 chr13 63843582 63843607 -56440705 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1072 330 221 139 94 chr13 63843904 63844149 -56440163 - L1MA9 LINE L1 -30 6282 6027 6 1072 27 0 0 0 chr13 63844195 63844222 -56440090 + AT_rich Low_complexity Low_complexity 1 27 0 6 1072 3352 100 17 23 chr13 63844269 63844789 -56439523 + L1_Mur2 LINE L1 4540 5056 -821 6 1072 295 263 30 10 chr13 63844788 63844888 -56439424 - L1MA9 LINE L1 -270 6042 5941 6 1072 740 182 0 63 chr13 63845233 63845299 -56439013 + B1_Mur1 SINE Alu 2 67 -82 6 1072 2000 151 135 21 chr13 63845299 63845467 -56438845 + MTC LTR MaLR 1 199 -222 6 1072 301 22 21 21 chr13 63845467 63845514 -56438798 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 6 1072 2000 151 135 21 chr13 63845514 63845723 -56438589 + MTC LTR MaLR 200 420 -1 6 1072 740 182 0 63 chr13 63845723 63845814 -56438498 + B1_Mur1 SINE Alu 68 149 0 6 1072 215 270 0 0 chr13 63845814 63845888 -56438424 + A-rich Low_complexity Low_complexity 2 75 0 6 1072 19373 67 15 33 chr13 63846145 63849574 -56434738 + L1VL4 LINE L1 191 3559 0 6 1072 32 57 0 0 chr13 63849845 63849898 -56434414 + AT_rich Low_complexity Low_complexity 1 53 0 6 1072 234 0 0 0 chr13 63850809 63850835 -56433477 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 6 1072 1058 135 0 6 chr13 63850835 63851014 -56433298 + (GGGAA)n Simple_repeat Simple_repeat 3 180 0 6 1072 486 49 0 0 chr13 63851014 63851075 -56433237 + (GAAAA)n Simple_repeat Simple_repeat 5 65 0 6 1072 397 274 145 0 chr13 63851152 63851276 -56433036 - B3A SINE B2 -55 143 2 6 1072 225 268 18 0 chr13 63851713 63851769 -56432543 + RSINE1 SINE B4 2 58 -107 6 1072 494 279 132 38 chr13 63852053 63852340 -56431972 - L1MB4 LINE L1 -10 6173 5859 6 1072 788 320 109 57 chr13 63852455 63852576 -56431736 + L1MB8 LINE L1 4352 4483 -1663 6 1072 709 214 115 0 chr13 63852576 63852758 -56431554 + B3 SINE B2 1 203 -13 6 1072 788 320 109 57 chr13 63852758 63853253 -56431059 + L1MB8 LINE L1 4484 5000 -1146 6 1072 296 320 0 0 chr13 63853253 63853328 -56430984 + ID4 SINE ID 9 83 0 6 1072 829 203 20 25 chr13 63853441 63853638 -56430674 + B3A SINE B2 18 213 -3 6 1072 473 268 52 7 chr13 63853646 63853800 -56430512 + L1MB8 LINE L1 5718 5878 -300 6 1072 371 324 9 0 chr13 63853856 63853964 -56430348 - PB1D10 SINE Alu -7 110 2 6 1072 428 277 21 0 chr13 63854101 63854195 -56430117 - B1F1 SINE Alu -45 104 9 6 1072 823 261 55 52 chr13 63854780 63855071 -56429241 - B4A SINE B4 0 292 1 6 1072 2492 44 98 3 chr13 63855385 63855701 -56428611 + ORR1A1 LTR MaLR 1 346 0 6 1072 14019 59 10 2 chr13 63855701 63857478 -56426834 + ORR1A1-int LTR MaLR 1 1792 0 6 1072 2626 40 67 9 chr13 63857478 63857741 -56426571 + ORR1A1 LTR MaLR 1 285 -61 6 1072 246 32 0 0 chr13 63857741 63857772 -56426540 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1072 2626 40 67 9 chr13 63857772 63857835 -56426477 + ORR1A1 LTR MaLR 286 345 -1 6 1072 183 42 0 0 chr13 63857839 63857863 -56426449 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1072 327 136 0 0 chr13 63858120 63858179 -56426133 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 1072 366 293 50 20 chr13 63858179 63858280 -56426032 + B4A SINE B4 30 133 -159 7 1072 707 210 40 41 chr13 63859155 63859366 -56424946 - Lx4B LINE L1 -5 7053 6738 7 1072 8050 72 13 4 chr13 63859366 63860380 -56423932 + RLTR13D5 LTR ERVK 1 1023 0 7 1072 622 246 140 51 chr13 63860380 63860464 -56423848 - Lx4B LINE L1 -239 6737 6655 7 1072 546 270 168 5 chr13 63860490 63860687 -56423625 + B4 SINE B4 1 229 -63 7 1072 725 167 36 0 chr13 63860682 63860820 -56423492 + B1_Mur4 SINE Alu 7 149 -1 7 1072 420 265 10 0 chr13 63860830 63860932 -56423380 + B3A SINE B2 1 103 -95 7 1072 21 0 0 0 chr13 63860950 63860971 -56423341 + AT_rich Low_complexity Low_complexity 1 21 0 7 1072 251 273 0 0 chr13 63860995 63861050 -56423262 + B4A SINE B4 220 274 -18 7 1072 612 0 0 0 chr13 63861050 63861118 -56423194 + (CA)n Simple_repeat Simple_repeat 2 69 0 7 1072 213 114 0 0 chr13 63861657 63861692 -56422620 - B1_Mus2 SINE Alu -26 121 87 7 1072 514 284 26 21 chr13 63862158 63862352 -56421960 - LTR82B Low_complexity ERVL -34 796 602 7 1072 286 289 76 16 chr13 63862823 63863037 -56421275 + MTD LTR MaLR 155 419 0 7 1072 919 181 0 37 chr13 63863092 63863281 -56421031 - URR1B DNA MER1_type -43 182 1 7 1072 30 0 0 0 chr13 63864718 63864748 -56419564 + AT_rich Low_complexity Low_complexity 1 30 0 7 1072 231 288 184 29 chr13 63864796 63864932 -56419380 + MLT1J LTR MaLR 9 165 -347 7 1072 36 23 0 0 chr13 63867890 63867933 -56416379 + AT_rich Low_complexity Low_complexity 1 43 0 7 1072 582 238 68 23 chr13 63868151 63868327 -56415985 + Tigger5 DNA MER2_type 2223 2406 0 7 1072 192 40 0 0 chr13 63868533 63868558 -56415754 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 7 1072 262 269 108 0 chr13 63868793 63868886 -56415426 - L2 LINE L2 -471 2948 2846 7 1072 263 300 0 14 chr13 63869879 63869950 -56414362 + ID2 SINE ID 3 72 -11 7 1072 591 15 0 0 chr13 63869950 63870018 -56414294 + (TC)n Simple_repeat Simple_repeat 1 68 0 7 1072 333 0 0 0 chr13 63870018 63870054 -56414258 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1072 844 227 12 21 chr13 63870070 63870297 -56414015 - B3A SINE B2 0 216 2 7 1072 232 261 31 0 chr13 63870463 63870528 -56413784 - MIRb SINE MIR -149 119 53 7 1072 558 322 173 13 chr13 63870586 63870979 -56413333 + MLT1G LTR MaLR 66 521 -70 7 1072 867 262 0 42 chr13 63871690 63871905 -56412407 + B4A SINE B4 79 284 -8 7 1072 673 258 4 131 chr13 63872976 63873244 -56411068 + Lx8 LINE L1 7238 7471 -2 7 1072 360 301 34 51 chr13 63873439 63873614 -56410698 + ORR1E LTR MaLR 18 189 -170 7 1072 187 229 48 32 chr13 63874925 63874988 -56409324 + L2 LINE L2 1836 1899 -1520 7 1072 758 214 139 23 chr13 63875002 63875174 -56409138 - B3A SINE B2 -6 192 1 7 1072 236 288 247 7 chr13 63875643 63875797 -56408515 + L2 LINE L2 2690 2880 -539 7 1072 1019 205 15 0 chr13 63876093 63876293 -56408019 - B3 SINE B2 -6 210 8 7 1072 504 0 0 0 chr13 63876322 63876378 -56407934 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 1072 1534 50 0 0 chr13 63877084 63877263 -56407049 + B2_Mm1a SINE B2 1 179 -14 7 1072 1074 219 99 115 chr13 63877487 63877869 -56406443 + MTE2a LTR MaLR 1 376 -3 7 1072 618 284 39 79 chr13 63877992 63878073 -56406239 - B4 SINE B4 -4 288 215 7 1072 437 0 19 0 chr13 63878073 63878126 -56406186 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 7 1072 618 284 39 79 chr13 63878126 63878273 -56406039 - B4 SINE B4 -78 214 69 7 1072 536 273 40 34 chr13 63878276 63878424 -56405888 - B4A SINE B4 -91 201 53 7 1072 495 239 99 21 chr13 63878424 63878565 -56405747 + Lx8 LINE L1 6980 7131 -342 7 1072 183 156 0 0 chr13 63878615 63878647 -56405665 + GA-rich Low_complexity Low_complexity 2 33 0 7 1072 1418 232 43 56 chr13 63879134 63879348 -56404964 - ORR1D2 LTR MaLR 0 370 145 7 1072 1199 195 189 31 chr13 63879348 63879671 -56404641 - ORR1D1 LTR MaLR 0 374 1 7 1072 1418 232 43 56 chr13 63879671 63879831 -56404481 - ORR1D2 LTR MaLR -226 144 1 7 1072 385 327 37 19 chr13 63879908 63880070 -56404242 - MER63A DNA AcHobo -44 166 2 7 1072 21 0 0 0 chr13 63880734 63880755 -56403557 + AT_rich Low_complexity Low_complexity 1 21 0 7 1072 213 229 0 40 chr13 63881123 63881173 -56403139 - ID4_ SINE ID -16 67 20 7 1072 716 157 82 0 chr13 63881677 63881811 -56402501 - ID_B1 SINE B4 0 224 80 7 1072 431 291 39 0 chr13 63882718 63882845 -56401467 + MER5A DNA MER1_type 5 136 -53 7 1072 284 269 234 89 chr13 63882848 63882943 -56401369 - L1MB4 LINE L1 0 6180 6076 7 1072 2288 137 35 3 chr13 63882943 63883309 -56401003 + ORR1C1 LTR MaLR 1 378 0 7 1072 284 269 234 89 chr13 63883309 63883366 -56400946 - L1MB4 LINE L1 -105 6075 6027 7 1072 948 173 47 31 chr13 63883366 63883557 -56400755 + B2_Mm2 SINE B2 2 195 0 7 1072 1134 73 0 0 chr13 63883562 63883699 -56400613 + B1_Mus2 SINE Alu 2 138 -9 7 1072 215 31 31 0 chr13 63883699 63883731 -56400581 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 7 1072 284 269 234 89 chr13 63883731 63883745 -56400567 - L1MB4 LINE L1 -154 6026 6026 7 1072 447 19 0 0 chr13 63883745 63883797 -56400515 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 7 1072 284 269 234 89 chr13 63883797 63884082 -56400230 - L1MB4 LINE L1 -154 6026 5654 7 1072 454 268 67 67 chr13 63884238 63884402 -56399910 - RSINE1 SINE B4 0 165 2 7 1072 533 55 0 14 chr13 63884515 63884589 -56399723 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 7 1072 1226 55 0 0 chr13 63884590 63884736 -56399576 - B1_Mus2 SINE Alu 0 147 2 7 1072 1244 247 138 23 chr13 63884737 63885209 -56399103 - L1MB4 LINE L1 -749 5397 4872 7 1072 305 293 53 7 chr13 63885534 63885685 -56398627 + RMER15 LTR ERVL 407 564 -11 7 1072 649 168 148 0 chr13 63885731 63885880 -56398432 - RMER15 LTR ERVL 0 575 405 7 1072 8788 93 14 0 chr13 63887035 63888120 -56396192 - Lx3_Mus LINE L1 0 7009 5917 7 1072 279 79 0 0 chr13 63888120 63888158 -56396154 + (TTG)n Simple_repeat Simple_repeat 2 39 0 7 1072 8788 93 14 0 chr13 63888158 63888282 -56396030 - Lx3_Mus LINE L1 -1093 5916 5784 7 1072 9746 65 4 5 chr13 63888285 63890243 -56394069 - L1Md_F2 LINE L1 0 6582 4626 7 1072 317 239 30 0 chr13 63890245 63890312 -56394000 + MER5A1 DNA MER1_type 36 104 -62 7 1072 388 188 9 18 chr13 63890312 63890426 -56393886 + CT-rich Low_complexity Low_complexity 1 113 0 7 1072 1119 230 0 0 chr13 63890470 63890670 -56393642 + B3 SINE B2 11 210 -6 7 1072 432 231 10 87 chr13 63890690 63890794 -56393518 - ID_B1 SINE B4 -46 178 83 7 1072 185 241 172 0 chr13 63890794 63890852 -56393460 + MER5A DNA MER1_type 122 189 0 7 1072 880 236 0 25 chr13 63891574 63891774 -56392538 - B3A SINE B2 -3 195 1 7 1072 21 0 0 0 chr13 63891795 63891816 -56392496 + AT_rich Low_complexity Low_complexity 1 21 0 7 1072 474 18 0 0 chr13 63892855 63892910 -56391402 + (CA)n Simple_repeat Simple_repeat 2 56 0 7 1072 1690 192 65 82 chr13 63893084 63893498 -56390814 + MTD LTR MaLR 13 419 0 7 1072 715 294 151 100 chr13 63893522 63894593 -56389719 + L1MCa LINE L1 176 1301 -5207 7 1072 378 263 189 55 chr13 63895357 63895476 -56388836 + MLT1A LTR MaLR 58 178 -196 7 1072 342 0 0 0 chr13 63895476 63895514 -56388798 + (TC)n Simple_repeat Simple_repeat 1 38 0 7 1072 522 31 0 0 chr13 63895514 63895577 -56388735 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 1072 378 263 189 55 chr13 63895577 63895673 -56388639 + MLT1A LTR MaLR 179 302 -72 7 1072 251 321 76 13 chr13 63895734 63895813 -56388499 - PB1D10 SINE Alu -6 111 28 7 1072 528 217 38 0 chr13 63896109 63896215 -56388097 + PB1D10 SINE Alu 1 110 -7 7 1072 25 0 0 0 chr13 63897331 63897356 -56386956 + AT_rich Low_complexity Low_complexity 1 25 0 7 1072 21 36 0 0 chr13 63897453 63897481 -56386831 + AT_rich Low_complexity Low_complexity 1 28 0 7 1072 298 300 38 51 chr13 63898262 63898420 -56385892 - RSINE1 SINE B4 -6 159 4 7 1072 201 116 23 23 chr13 63899200 63899244 -56385068 + T-rich Low_complexity Low_complexity 5 48 0 7 1072 1161 62 7 0 chr13 63899245 63899390 -56384922 - B1_Mus2 SINE Alu -1 146 1 7 1072 1731 236 179 33 chr13 63899463 63900194 -56384118 - RCHARR1 DNA MER1_type -134 840 3 7 1072 580 276 70 12 chr13 63900200 63900372 -56383940 + B3A SINE B2 1 182 -16 7 1072 270 0 0 0 chr13 63900372 63900402 -56383910 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1072 1803 183 71 25 chr13 63902764 63903117 -56381195 - MTD LTR MaLR -4 415 47 7 1072 976 116 7 33 chr13 63903117 63903269 -56381043 + B1_Mus1 SINE Alu 1 148 0 7 1072 225 187 0 0 chr13 63903270 63903345 -56380967 + A-rich Low_complexity Low_complexity 1 75 0 7 1072 278 213 168 11 chr13 63903627 63903722 -56380590 - Lx8 LINE L1 -12 7461 7352 7 1072 554 278 47 62 chr13 63903718 63903929 -56380383 - Lx8 LINE L1 -416 7057 6850 7 1072 231 182 0 35 chr13 63903931 63903988 -56380324 + GA-rich Low_complexity Low_complexity 2 56 0 7 1072 1372 252 122 50 chr13 63904049 63904507 -56379805 - L1M3 LINE L1 -2041 4099 3604 7 1072 968 143 14 0 chr13 63904507 63904654 -56379658 - B1_Mur3 SINE Alu 0 149 1 7 1072 1372 252 122 50 chr13 63904654 63904900 -56379412 - L1M3 LINE L1 -2537 3603 3344 7 1072 437 292 16 16 chr13 63905064 63905186 -56379126 + L2a LINE L2 3305 3426 0 7 1072 3585 194 89 15 chr13 63906790 63907587 -56376725 + Lx2B LINE L1 6117 6972 -28 7 1072 774 176 73 0 chr13 63907648 63907784 -56376528 - B1_Mur4 SINE Alu -3 147 2 7 1072 446 315 75 20 chr13 63907871 63908017 -56376295 + RSINE1 SINE B4 4 157 -8 7 1072 29 0 0 0 chr13 63908030 63908059 -56376253 + AT_rich Low_complexity Low_complexity 1 29 0 7 1072 294 317 72 72 chr13 63908364 63908517 -56375795 - B4 SINE B4 -4 288 136 7 1072 769 190 101 87 chr13 63908504 63908723 -56375589 - RMER21B LTR ERV1 -275 567 346 7 1072 494 277 107 0 chr13 63908851 63908963 -56375349 - B4 SINE B4 -81 211 88 7 1072 247 133 0 0 chr13 63908964 63909009 -56375303 - Lx9 LINE L1 -53 7591 7547 8 1072 339 241 91 11 chr13 63909022 63909110 -56375202 - B4 SINE B4 -187 105 11 7 1072 23 33 0 0 chr13 63909938 63909968 -56374344 + AT_rich Low_complexity Low_complexity 1 30 0 8 1072 274 382 128 48 chr13 63910478 63910627 -56373685 - LTR78 LTR ERV1 -10 1294 1129 8 1072 870 38 0 0 chr13 63910627 63910733 -56373579 + (CCA)n Simple_repeat Simple_repeat 2 107 0 8 1072 274 382 128 48 chr13 63910733 63910981 -56373331 - LTR78 LTR ERV1 -176 1128 866 8 1072 276 326 76 0 chr13 63911111 63911203 -56373109 - LTR78 LTR ERV1 -753 551 453 8 1072 502 281 59 48 chr13 63911715 63911902 -56372410 - ORR1E LTR MaLR -170 189 1 8 1072 300 338 75 57 chr13 63912192 63912443 -56371869 - MLT1A LTR MaLR -111 248 1 8 1072 378 225 62 27 chr13 63912651 63912797 -56371515 - L1MEd LINE L1 -4697 1528 1378 8 1072 229 265 86 0 chr13 63912917 63913034 -56371278 - L1MEd LINE L1 -5079 1040 914 8 1072 654 234 20 27 chr13 63913104 63913253 -56371059 - B1_Mur1 SINE Alu -1 148 1 8 1072 408 369 124 14 chr13 63913351 63913626 -56370686 - L1MEd LINE L1 -5319 800 496 8 1072 589 321 139 47 chr13 63913745 63914003 -56370309 - B4A SINE B4 -2 290 9 8 1072 276 278 0 0 chr13 63914155 63914209 -56370103 + ID4 SINE ID 2 55 -28 8 1072 658 251 120 5 chr13 63914212 63914404 -56369908 - ID_B1 SINE B4 -9 215 2 8 1072 279 203 0 112 chr13 63914611 63914700 -56369612 - ID_B1 SINE B4 0 224 146 8 1072 619 48 0 45 chr13 63914622 63914710 -56369602 - B1_Mm SINE Alu -7 140 57 8 1072 236 305 68 0 chr13 63914868 63914927 -56369385 - tRNA-Ala-GCY_ tRNA tRNA -7 68 6 8 1072 455 135 6 38 chr13 63915347 63915443 -56368869 + B1_Mur4 SINE Alu 21 142 -8 8 1072 398 276 46 30 chr13 63915697 63915828 -56368484 + MLT1E2 LTR MaLR 5 137 -490 8 1072 252 0 0 0 chr13 63915836 63915864 -56368448 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 8 1072 204 179 217 29 chr13 63917024 63917093 -56367219 + MIRb SINE MIR 128 209 -59 8 1072 396 329 112 0 chr13 63917362 63917505 -56366807 - RSINE1 SINE B4 -6 159 1 8 1072 1115 68 7 0 chr13 63918278 63918424 -56365888 + B1_Mus2 SINE Alu 1 147 0 8 1072 327 306 171 36 chr13 63918644 63918837 -56365475 + MER58A DNA MER1_type 6 224 0 8 1072 686 167 26 77 chr13 63918891 63919047 -56365265 - B1_Mur3 SINE Alu -1 148 1 8 1072 986 251 10 0 chr13 63920037 63920244 -56364068 - B3 SINE B2 -7 209 1 8 1072 729 129 0 0 chr13 63920699 63920815 -56363497 + (TA)n Simple_repeat Simple_repeat 2 117 0 8 1072 228 57 94 0 chr13 63921453 63921506 -56362806 + T-rich Low_complexity Low_complexity 4 61 0 8 1072 23 0 0 0 chr13 63921595 63921618 -56362694 + AT_rich Low_complexity Low_complexity 1 23 0 8 1072 25 51 0 0 chr13 63921792 63921831 -56362481 + AT_rich Low_complexity Low_complexity 1 39 0 8 1072 1043 285 130 0 chr13 63921986 63922362 -56361950 - Lx7 LINE L1 -383 7313 6889 8 1072 249 163 0 0 chr13 63923161 63923210 -56361102 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1072 440 246 117 21 chr13 63923218 63923363 -56360949 - RSINE1 SINE B4 -4 161 3 8 1072 369 321 157 39 chr13 63923889 63924329 -56359983 - L1MEg LINE L1 -4126 1958 1467 8 1072 27 0 0 0 chr13 63924329 63924356 -56359956 + AT_rich Low_complexity Low_complexity 1 27 0 8 1072 310 256 94 25 chr13 63924367 63924527 -56359785 - L1MEg LINE L1 -4528 1480 1310 8 1072 2266 102 3 12 chr13 63924732 63925069 -56359243 - L1_Mus3 LINE L1 -7 6631 6298 8 1072 265 303 32 43 chr13 63925241 63925334 -56358978 + B1F1 SINE Alu 47 138 -11 8 1072 319 289 121 46 chr13 63925444 63925618 -56358694 - MIR SINE MIR -58 204 18 8 1072 18612 76 6 5 chr13 63926371 63928586 -56355726 - L1_Mus2 LINE L1 0 6566 4343 8 1072 2710 38 20 0 chr13 63928586 63928927 -56355385 - L1Md_F2 LINE L1 0 6582 6235 8 1072 18612 86 6 8 chr13 63928927 63929991 -56354321 - L1_Mus2 LINE L1 -1541 4342 3286 8 1072 1884 96 9 2 chr13 63929989 63930287 -56354025 - L1_Mur1 LINE L1 -3541 2345 2046 8 1072 265 300 35 23 chr13 63930496 63930722 -56353590 + (TATATG)n Simple_repeat Simple_repeat 1 228 0 8 1072 326 268 103 38 chr13 63930801 63931014 -56353298 - L1M5 LINE L1 -3058 3088 2862 8 1072 871 160 185 42 chr13 63931540 63931729 -56352583 + B3 SINE B2 1 216 0 8 1072 24 32 0 0 chr13 63932341 63932372 -56351940 + AT_rich Low_complexity Low_complexity 1 31 0 8 1072 755 247 72 0 chr13 63932529 63932695 -56351617 + B3 SINE B2 1 178 -38 8 1072 22 56 0 0 chr13 63932702 63932738 -56351574 + AT_rich Low_complexity Low_complexity 1 36 0 8 1072 499 197 263 0 chr13 63933577 63933714 -56350598 + B4 SINE B4 6 178 -114 8 1072 288 143 0 0 chr13 63933726 63933782 -56350530 + (CCTG)n Simple_repeat Simple_repeat 4 59 0 8 1072 303 190 33 33 chr13 63933782 63933797 -56350515 - Lx4A LINE L1 -160 6898 6885 8 1072 2148 168 5 23 chr13 63933797 63934181 -56350131 - Lx4A LINE L1 0 7058 6682 8 1072 303 190 33 33 chr13 63934181 63934225 -56350087 - Lx4A LINE L1 -174 6884 6839 8 1072 376 290 66 85 chr13 63934725 63935093 -56349219 - ORR1E LTR MaLR 0 379 2 8 1072 335 296 118 56 chr13 63935349 63935510 -56348802 - L2 LINE L2 -1743 1676 1506 8 1072 262 292 17 34 chr13 63936873 63936990 -56347322 + PB1D10 SINE Alu 1 115 -2 8 1072 675 253 124 0 chr13 63937239 63937425 -56346887 + MER2 DNA MER2_type 130 338 -7 8 1072 461 318 156 0 chr13 63937468 63937641 -56346671 - MER58C DNA MER1_type -15 200 1 8 1072 535 323 47 13 chr13 63937890 63938280 -56346032 - L1ME2 LINE L1 -330 5834 5431 8 1072 419 291 145 30 chr13 63938301 63938804 -56345508 - L1ME2 LINE L1 -3442 2704 2144 8 1072 215 317 0 89 chr13 63938898 63938988 -56345324 - MIR SINE MIR -149 113 32 8 1072 194 0 0 37 chr13 63939583 63939610 -56344702 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 8 1072 225 282 75 25 chr13 63939649 63939729 -56344583 - B1F SINE Alu 0 149 66 8 1072 1480 124 33 4 chr13 63939766 63940009 -56344303 - Lx2 LINE L1 -1 6996 6747 8 1072 301 241 0 0 chr13 63940011 63940069 -56344243 - ID_B1 SINE B4 -67 157 100 8 1072 303 383 64 13 chr13 63940278 63940434 -56343878 - HAL1 LINE L1 -2190 317 154 8 1072 238 353 10 19 chr13 63940553 63940657 -56343655 + (TATATG)n Simple_repeat Simple_repeat 2 104 0 8 1072 372 278 197 38 chr13 63940778 63941022 -56343290 + B4 SINE B4 6 288 -4 8 1072 360 0 0 0 chr13 63941051 63941091 -56343221 + (CATA)n Simple_repeat Simple_repeat 4 43 0 8 1072 287 236 28 11 chr13 63941890 63941984 -56342328 - L1M4 LINE L1 -914 5232 5133 8 1072 361 334 136 54 chr13 63943677 63944009 -56340303 - ORR1E LTR MaLR 0 359 1 8 1072 521 229 38 0 chr13 63944031 63944136 -56340176 + PB1D9 SINE Alu 1 109 -11 8 1072 180 0 0 0 chr13 63944137 63944157 -56340155 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 8 1072 25 51 0 0 chr13 63945138 63945177 -56339135 + AT_rich Low_complexity Low_complexity 1 39 0 8 1072 1190 97 23 6 chr13 63946285 63946462 -56337850 + B2_Mm2 SINE B2 2 181 -14 8 1072 7311 46 6 5 chr13 63947543 63948435 -56335877 - L1_Mus1 LINE L1 0 6567 5675 8 1072 2557 182 63 20 chr13 63948819 63949323 -56334989 - RMER5 LTR ERV1 0 534 9 8 1072 21 0 0 0 chr13 63950833 63950854 -56333458 + AT_rich Low_complexity Low_complexity 1 21 0 8 1072 1210 54 0 0 chr13 63951019 63951166 -56333146 - B1_Mus2 SINE Alu 0 147 1 8 1072 25 65 0 0 chr13 63951662 63951708 -56332604 + AT_rich Low_complexity Low_complexity 1 46 0 8 1072 687 254 92 92 chr13 63951901 63952535 -56331777 + L1MC2 LINE L1 5188 5818 -526 8 1072 688 236 7 7 chr13 63952538 63952687 -56331625 + B1_Mur1 SINE Alu 1 149 0 8 1072 672 256 106 40 chr13 63952704 63952977 -56331335 + L1MC2 LINE L1 5845 6135 -209 8 1072 353 250 36 36 chr13 63953103 63953186 -56331126 + ID2 SINE ID 1 83 0 8 1072 1017 173 119 0 chr13 63956414 63956616 -56327696 - URR1A DNA MER1_type 0 226 1 8 1072 509 197 167 38 chr13 63957919 63958051 -56326261 + B1_Mur2 SINE Alu 1 149 0 8 1072 189 0 0 0 chr13 63958285 63958306 -56326006 + (GAAAA)n Simple_repeat Simple_repeat 1 21 0 8 1072 207 162 0 0 chr13 63958789 63958826 -56325486 + (TATG)n Simple_repeat Simple_repeat 4 40 0 8 1072 431 223 78 0 chr13 63959405 63959508 -56324804 - PB1D10 SINE Alu -1 116 6 8 1072 258 263 89 59 chr13 63959426 63959527 -56324785 - ID_B1 SINE B4 -48 176 73 8 1072 999 156 17 0 chr13 63961453 63961626 -56322686 + URR1B DNA MER1_type 50 225 0 8 1072 394 307 109 38 chr13 63961844 63962027 -56322285 + B3A SINE B2 1 196 -2 8 1072 216 233 0 72 chr13 63962190 63962287 -56322025 + GA-rich Low_complexity Low_complexity 1 90 0 8 1072 220 143 0 35 chr13 63962323 63962381 -56321931 + GA-rich Low_complexity Low_complexity 1 56 0 8 1072 207 0 0 0 chr13 63962500 63962523 -56321789 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 8 1072 338 179 0 0 chr13 63962541 63962597 -56321715 - ID4 SINE ID -27 56 1 8 16 271 304 153 56 chr13 63962667 63963360 -56320952 + L1M4c LINE L1 828 1587 -4797 8 1073 324 120 0 0 chr13 63963364 63963414 -56320898 + (TA)n Simple_repeat Simple_repeat 2 51 0 8 1073 32 95 0 0 chr13 63963429 63963524 -56320788 + AT_rich Low_complexity Low_complexity 1 95 0 8 1073 481 298 31 18 chr13 63963556 63963778 -56320534 + L1M4c LINE L1 1594 1818 -4566 8 1073 206 241 48 0 chr13 63963834 63963917 -56320395 + (TA)n Simple_repeat Simple_repeat 1 87 0 8 1073 388 315 46 23 chr13 63963924 63964027 -56320285 + L1M4c LINE L1 2231 2333 -4051 8 1073 558 250 68 0 chr13 63964027 63964159 -56320153 + B1_Mur3 SINE Alu 2 142 -7 8 1073 925 292 29 44 chr13 63964159 63964638 -56319674 + L1M4c LINE L1 2334 2810 -3566 8 1073 309 67 0 0 chr13 63964822 63964867 -56319445 - IAPLTR2b LTR ERVK 0 327 283 8 1073 2413 18 0 0 chr13 63964867 63965140 -56319172 + RLTR10-int LTR ERVK 1712 1984 -3 8 1073 2876 49 7 49 chr13 63965142 63965547 -56318765 + RLTR10 LTR ERVK 1 388 -2 8 1073 818 219 85 15 chr13 63965549 63965748 -56318564 - B3 SINE B2 -3 213 1 8 1073 426 202 222 37 chr13 63965957 63966065 -56318247 + B1_Mus2 SINE Alu 6 133 -14 8 1073 540 0 0 0 chr13 63966067 63966127 -56318185 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 8 1073 187 304 206 40 chr13 63966200 63966399 -56317913 - MIR SINE MIR -1 261 30 8 1073 200 61 0 57 chr13 63966440 63966475 -56317837 + (TTTC)n Simple_repeat Simple_repeat 2 34 0 8 1073 819 232 175 4 chr13 63966521 63966750 -56317562 - B4 SINE B4 -2 290 23 9 1073 399 247 84 32 chr13 63967071 63967226 -56317086 - L1MA10 LINE L1 -2 6332 6170 9 1073 973 160 190 16 chr13 63967579 63967763 -56316549 - B3 SINE B2 0 216 1 9 1073 525 245 129 0 chr13 63967768 63967915 -56316397 - MER5A1 DNA MER1_type 0 166 1 9 1073 185 125 40 40 chr13 63971873 63971948 -56312364 + (TTTG)n Simple_repeat Simple_repeat 2 76 0 9 1073 246 62 0 0 chr13 63972297 63972329 -56311983 + (TTG)n Simple_repeat Simple_repeat 2 33 0 9 1073 366 222 12 12 chr13 63972653 63972735 -56311577 - RSINE1 SINE B4 -81 84 3 9 1073 466 326 13 54 chr13 63972913 63973062 -56311250 - ID_B1 SINE B4 -2 222 80 9 1073 365 248 23 8 chr13 63974747 63974877 -56309435 + (TA)n Simple_repeat Simple_repeat 2 133 0 9 1073 1255 126 31 61 chr13 63976293 63976322 -56307990 - URR1B DNA MER1_type -4 221 196 9 1073 762 43 0 0 chr13 63976322 63976416 -56307896 + (TTTC)n Simple_repeat Simple_repeat 2 95 0 9 1073 1068 63 0 20 chr13 63976416 63976562 -56307750 - B1_Mus2 SINE Alu -3 144 2 9 1073 1255 126 31 61 chr13 63976562 63976759 -56307553 - URR1B DNA MER1_type -30 195 2 9 1073 1161 75 0 0 chr13 63977029 63977175 -56307137 + B1_Mus1 SINE Alu 3 148 0 9 1073 309 151 0 0 chr13 63977280 63977333 -56306979 + (TG)n Simple_repeat Simple_repeat 2 54 0 9 1073 520 291 25 25 chr13 63978189 63978309 -56306003 + PB1D7 SINE Alu 1 120 0 9 1073 411 258 85 8 chr13 63978341 63978470 -56305842 + B1_Mur1 SINE Alu 3 141 -8 9 1073 355 218 86 0 chr13 63978480 63978580 -56305732 + PB1D10 SINE Alu 6 120 -7 9 1073 1638 166 31 72 chr13 63978995 63979253 -56305059 + ORR1D1 LTR MaLR 1 250 -124 9 1073 216 0 0 0 chr13 63979253 63979277 -56305035 + (CCTG)n Simple_repeat Simple_repeat 4 27 0 9 1073 1638 166 31 72 chr13 63979277 63979408 -56304904 + ORR1D1 LTR MaLR 251 374 0 9 1073 224 30 30 0 chr13 63979595 63979628 -56304684 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 9 1073 534 121 32 32 chr13 63980108 63980202 -56304110 - B2_Mm2 SINE B2 -1 194 101 9 1073 530 191 18 9 chr13 63980215 63980326 -56303986 + L1_Rod LINE L1 5660 5771 -76 9 1073 440 48 32 0 chr13 63982030 63982092 -56302220 + (CATA)n Simple_repeat Simple_repeat 4 67 0 9 1073 350 317 106 82 chr13 63982911 63983193 -56301119 + B4A SINE B4 2 290 -2 9 1073 766 308 143 57 chr13 63983274 63983753 -56300559 + MLT2B3 LTR ERVL 1 506 -48 9 1073 664 0 52 0 chr13 63983753 63983849 -56300463 + (TG)n Simple_repeat Simple_repeat 2 102 0 9 1073 766 308 143 57 chr13 63983849 63983878 -56300434 + MLT2B3 LTR ERVL 507 552 -2 9 1073 707 233 100 32 chr13 63984147 63984426 -56299886 - Lx9 LINE L1 -25 7619 7322 9 1073 724 291 196 9 chr13 63985061 63985504 -56298808 + MER21B LTR ERV1 275 858 -5 9 1073 431 145 12 0 chr13 63986049 63986132 -56298180 + CT-rich Low_complexity Low_complexity 5 88 0 9 1073 486 108 0 0 chr13 63986180 63986263 -56298049 + (TG)n Simple_repeat Simple_repeat 2 84 0 9 1073 471 274 9 0 chr13 63986276 63986382 -56297930 - RSINE1 SINE B4 -53 112 6 9 1073 362 336 55 18 chr13 63986411 63986520 -56297792 + B1F1 SINE Alu 3 115 -34 9 1073 1444 130 274 0 chr13 63987667 63987952 -56296360 - ORR1B2 LTR MaLR 0 367 5 9 1073 315 278 116 23 chr13 63987986 63988115 -56296197 + B1F SINE Alu 8 148 -1 9 1073 21 57 0 0 chr13 63988265 63988300 -56296012 + AT_rich Low_complexity Low_complexity 1 35 0 9 1073 429 226 36 0 chr13 63988665 63988749 -56295563 + RSINE1 SINE B4 67 153 -12 9 1073 266 0 29 0 chr13 63988981 63989015 -56295297 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 9 1073 540 239 18 9 chr13 63990218 63990332 -56293980 - PB1D10 SINE Alu -2 115 1 9 1073 288 188 0 0 chr13 63990363 63990427 -56293885 + CT-rich Low_complexity Low_complexity 1 64 0 9 1073 922 190 128 0 chr13 63990450 63990629 -56293683 - B3 SINE B2 -14 202 1 9 1073 859 261 154 38 chr13 63990656 63990975 -56293337 - ORR1E LTR MaLR -1 358 3 9 1073 536 250 49 16 chr13 63991007 63991129 -56293183 + B1F SINE Alu 14 139 -10 9 1073 899 239 23 9 chr13 63992056 63992271 -56292041 + MLT1D LTR MaLR 288 505 0 9 1073 281 301 70 18 chr13 63993182 63993319 -56290993 - PB1D10 SINE Alu 0 149 2 9 1073 242 89 44 0 chr13 63993840 63993885 -56290427 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 9 1073 214 312 96 11 chr13 63994402 63994496 -56289816 - PB1D10 SINE Alu -15 102 1 9 1073 415 255 75 0 chr13 63994496 63994528 -56289784 - B4 SINE B4 -203 89 50 9 1073 517 297 81 0 chr13 63994573 63994721 -56289591 - RSINE1 SINE B4 -4 161 2 9 1073 217 257 0 14 chr13 63994929 63995000 -56289312 + T-rich Low_complexity Low_complexity 6 75 0 9 1073 22 0 0 0 chr13 63995156 63995178 -56289134 + AT_rich Low_complexity Low_complexity 1 22 0 9 1073 272 333 46 0 chr13 63995361 63995448 -56288864 - RSINE1 SINE B4 0 165 75 9 1073 477 326 7 0 chr13 63995508 63995646 -56288666 - ID_B1 SINE B4 -1 223 85 9 1073 22 0 0 0 chr13 63996239 63996261 -56288051 + AT_rich Low_complexity Low_complexity 1 22 0 9 1073 408 248 91 9 chr13 63996269 63996379 -56287933 - B1F SINE Alu -8 141 23 9 1073 202 314 117 61 chr13 63998050 63998247 -56286065 + L2b LINE L2 3148 3355 -20 9 1073 233 0 62 0 chr13 63998378 63998410 -56285902 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 9 1073 363 300 70 0 chr13 63998815 63998915 -56285397 - PB1D10 SINE Alu -8 109 3 9 1073 209 200 46 0 chr13 63999087 63999152 -56285160 + (TTTA)n Simple_repeat Simple_repeat 1 68 0 9 1073 368 339 26 9 chr13 63999622 63999738 -56284574 - RSINE1 SINE B4 -5 160 43 9 1073 355 192 122 14 chr13 64001008 64001082 -56283230 - ID SINE ID -142 82 1 1 1073 378 57 0 0 chr13 64001925 64001978 -56282334 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1073 216 0 0 0 chr13 64001978 64002002 -56282310 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1073 502 208 18 36 chr13 64002013 64002123 -56282189 + RMER5 LTR ERV1 365 472 -62 4 1073 252 319 57 21 chr13 64003621 64003762 -56280550 + L2 LINE L2 2671 2816 -603 5 1073 334 280 120 0 chr13 64003844 64003969 -56280343 - MIRb SINE MIR -14 254 115 6 1073 312 309 163 0 chr13 64004772 64004895 -56279417 - ID_B1 SINE B4 0 224 82 7 1073 248 254 79 0 chr13 64006104 64006167 -56278145 - ID SINE ID -154 70 3 7 1073 729 234 60 15 chr13 64006679 64006879 -56277433 - B3 SINE B2 -6 210 2 8 1073 258 248 17 0 chr13 64006990 64007063 -56277249 - L1MA9 LINE L1 -399 5913 5840 9 1073 384 284 43 81 chr13 64007430 64007454 -56276858 + B4 SINE B4 70 220 -68 1 1073 842 152 15 8 chr13 64007454 64007587 -56276725 + B1_Mur2 SINE Alu 10 143 -6 1 1073 221 182 0 22 chr13 64007591 64007636 -56276676 + GA-rich Low_complexity Low_complexity 3 46 0 1 1073 455 211 6 160 chr13 64009014 64009183 -56275129 + MT2A LTR ERVL 1 143 -390 1 1073 252 0 0 0 chr13 64009616 64009644 -56274668 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1073 283 249 23 11 chr13 64009904 64010079 -56274233 + C-rich Low_complexity Low_complexity 4 180 0 1 1073 200 11 0 160 chr13 64010071 64010283 -56274029 + (CCCTG)n Simple_repeat Simple_repeat 3 180 0 1 1073 747 267 167 8 chr13 64010412 64010741 -56273571 + MER74A LTR ERVL 7 358 -200 1 1073 618 59 9 38 chr13 64010774 64010880 -56273432 + L1Md_F2 LINE L1 6476 6578 -4 1 1073 437 0 19 0 chr13 64010938 64010991 -56273321 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1073 207 0 0 0 chr13 64010991 64011013 -56273299 + (GA)n Simple_repeat Simple_repeat 1 23 0 2 1073 1073 54 24 0 chr13 64011015 64011181 -56273131 + (TG)n Simple_repeat Simple_repeat 2 171 0 2 1073 322 206 48 0 chr13 64011185 64011248 -56273064 - ID4_ SINE ID -7 76 11 2 1073 528 237 35 9 chr13 64011256 64011371 -56272941 - B1F SINE Alu -1 148 31 2 1073 209 227 0 0 chr13 64011380 64011424 -56272888 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 2 1073 282 210 0 114 chr13 64011479 64011549 -56272763 - B4 SINE B4 -136 156 95 2 1073 526 242 50 0 chr13 64011573 64011693 -56272619 - ID_B1 SINE B4 -97 127 2 2 1073 186 347 28 0 chr13 64011694 64011766 -56272546 - L2a LINE L2 -44 3382 3309 2 1073 849 145 0 0 chr13 64012322 64012501 -56271811 + (TC)n Simple_repeat Simple_repeat 2 180 0 2 1073 643 142 0 13 chr13 64012502 64012652 -56271660 + CT-rich Low_complexity Low_complexity 1 148 0 2 1073 633 188 202 45 chr13 64012685 64012863 -56271449 - ID_B1 SINE B4 -15 209 4 3 1073 477 0 0 0 chr13 64012973 64013026 -56271286 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1073 3041 80 2 27 chr13 64013659 64014069 -56270243 - MTB LTR MaLR 0 400 1 3 1073 429 248 16 79 chr13 64014233 64014360 -56269952 - B4A SINE B4 0 292 174 3 1073 364 205 11 126 chr13 64014792 64014887 -56269425 + Lx8 LINE L1 7246 7329 -144 3 1073 188 35 35 0 chr13 64014888 64014917 -56269395 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 3 1073 335 220 141 11 chr13 64015075 64015167 -56269145 - MTEa LTR MaLR -275 104 1 3 1073 1370 195 19 75 chr13 64015178 64015538 -56268774 - Lx7 LINE L1 0 7696 7357 3 1073 415 90 58 41 chr13 64015543 64015797 -56268515 + (TAGA)n Simple_repeat Simple_repeat 1 258 0 3 1073 803 39 10 0 chr13 64015875 64015978 -56268334 + (GGAA)n Simple_repeat Simple_repeat 3 106 0 3 1073 263 247 90 70 chr13 64016153 64016253 -56268059 + RMER15 LTR ERVL 1 102 -473 4 1073 528 16 0 0 chr13 64016284 64016345 -56267967 + (GA)n Simple_repeat Simple_repeat 1 61 0 4 1073 255 103 0 0 chr13 64016345 64016383 -56267929 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1073 269 248 265 10 chr13 64017576 64017678 -56266634 - ID_B1 SINE B4 -18 206 79 4 1073 469 214 24 0 chr13 64017789 64017873 -56266439 + B4A SINE B4 186 271 -21 4 1073 321 89 0 0 chr13 64017878 64017923 -56266389 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1073 183 114 0 0 chr13 64018214 64018249 -56266063 + (CCCCCA)n Simple_repeat Simple_repeat 2 36 0 4 1073 180 0 0 0 chr13 64019197 64019217 -56265095 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 1073 808 37 19 0 chr13 64019376 64019484 -56264828 + (GA)n Simple_repeat Simple_repeat 2 111 0 4 1073 446 314 158 58 chr13 64021113 64021404 -56262908 - MER2 DNA MER2_type -1 344 25 4 1073 266 0 29 0 chr13 64022125 64022159 -56262153 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1073 303 28 0 0 chr13 64022363 64022399 -56261913 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 5 1073 407 310 139 6 chr13 64022412 64022584 -56261728 - RMER15 LTR ERVL -18 557 363 5 1073 2127 300 82 56 chr13 64022646 64023614 -56260698 - Lx8 LINE L1 -299 7174 6182 5 1073 953 280 23 12 chr13 64023616 64023873 -56260439 - RMER15-int LTR ERVL -2445 2554 2295 5 1073 468 0 0 0 chr13 64024336 64024388 -56259924 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1073 474 49 0 0 chr13 64024621 64024682 -56259630 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 5 1073 524 162 30 0 chr13 64024701 64024800 -56259512 - ID_B1 SINE B4 0 224 123 5 1073 269 233 0 16 chr13 64024811 64024872 -56259440 - ID4_ SINE ID -19 64 5 5 1073 534 303 80 69 chr13 64025288 64025466 -56258846 - RMER13A LTR ERVK -489 419 200 5 1073 1984 103 9 59 chr13 64025466 64025805 -56258507 + RLTRETN_Mm LTR ERVK 1 322 0 5 1073 534 295 105 77 chr13 64025805 64025989 -56258323 - RMER13A LTR ERVK -661 199 13 5 1073 337 219 47 0 chr13 64025988 64026052 -56258260 - B1_Mur3 SINE Alu -81 68 2 6 1073 1332 300 72 35 chr13 64026055 64026711 -56257601 - RMER15-int LTR ERVL -3574 1425 746 5 1073 1345 323 63 35 chr13 64026734 64027308 -56257004 - RMER15-int LTR ERVL -4406 593 4 5 1073 596 252 100 6 chr13 64027320 64027480 -56256832 - RMER15 LTR ERVL -18 557 383 5 1073 476 280 128 113 chr13 64027714 64027945 -56256367 + MLT1A0 LTR MaLR 39 323 -51 6 1073 1401 73 34 0 chr13 64027945 64028124 -56256188 - B2_Mm2 SINE B2 -10 185 1 6 1073 476 273 53 127 chr13 64028124 64028178 -56256134 + MLT1A0 LTR MaLR 314 354 -11 6 1073 1095 239 14 0 chr13 64028415 64028628 -56255684 - B3 SINE B2 0 216 1 6 1073 540 0 0 0 chr13 64028974 64029034 -56255278 + (TC)n Simple_repeat Simple_repeat 1 60 0 6 1073 211 268 0 18 chr13 64029043 64029100 -56255212 + G-rich Low_complexity Low_complexity 5 60 0 6 1073 927 86 34 22 chr13 64029158 64029336 -56254976 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 6 1073 202 152 0 0 chr13 64029336 64029364 -56254948 + polypyrimidine Low_complexity Low_complexity 7 34 0 6 1073 441 0 0 0 chr13 64029882 64029931 -56254381 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1073 441 0 0 0 chr13 64031075 64031124 -56253188 + (GA)n Simple_repeat Simple_repeat 1 49 0 6 1073 368 337 54 16 chr13 64031208 64031392 -56252920 - MIR SINE MIR 0 262 72 7 1073 575 311 131 60 chr13 64031394 64031846 -56252466 - MLT1F2 LTR MaLR -4 556 73 7 1073 191 237 0 0 chr13 64031905 64031943 -56252369 - MIR SINE MIR -197 65 28 7 1073 989 289 47 63 chr13 64031947 64032326 -56251986 - MTE2b LTR MaLR -2 357 1 7 1073 262 307 83 55 chr13 64032362 64032617 -56251695 - MTD LTR MaLR -15 404 98 7 1073 699 264 23 23 chr13 64032690 64032938 -56251374 + ORR1E LTR MaLR 13 287 -92 7 1073 23 0 0 0 chr13 64033003 64033026 -56251286 + AT_rich Low_complexity Low_complexity 1 23 0 7 1073 1056 231 9 9 chr13 64033332 64033546 -56250766 + ID_B1 SINE B4 3 216 -8 7 1073 216 0 0 0 chr13 64033570 64033594 -56250718 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1073 536 276 125 37 chr13 64034157 64034396 -56249916 + MLT-int LTR MaLR 1529 1735 0 7 1073 261 288 186 31 chr13 64034417 64034546 -56249766 + MLT1A1 LTR MaLR 90 238 -170 8 1073 266 242 80 50 chr13 64034695 64034795 -56249517 - PB1 SINE Alu -4 123 21 8 1073 394 264 180 40 chr13 64034727 64034877 -56249435 - B4 SINE B4 -121 171 1 8 1073 244 230 13 39 chr13 64034923 64035000 -56249312 - Lx8 LINE L1 -2 7471 7397 8 1073 315 260 0 52 chr13 64035159 64035236 -56249076 - ID2 SINE ID -8 75 3 8 1073 2473 64 3 69 chr13 64035236 64035586 -56248726 + ORR1A2 LTR MaLR 1 327 0 8 1073 211 184 0 0 chr13 64036762 64036800 -56247512 + (CA)n Simple_repeat Simple_repeat 1 38 0 8 1073 351 96 0 0 chr13 64036850 64036902 -56247410 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1073 299 211 0 0 chr13 64037264 64037316 -56246996 - B1_Mur2 SINE Alu -56 93 42 8 1073 405 162 0 0 chr13 64037332 64037443 -56246869 + CT-rich Low_complexity Low_complexity 70 180 0 8 1073 276 146 53 35 chr13 64037446 64037503 -56246809 - PB1D9 SINE Alu -61 59 2 8 1073 738 278 40 5 chr13 64037516 64037715 -56246597 - B3 SINE B2 -10 206 1 9 1073 359 236 96 78 chr13 64038919 64039034 -56245278 - PB1D10 SINE Alu 0 117 1 9 1073 288 0 0 0 chr13 64039437 64039469 -56244843 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 9 1073 254 220 49 4 chr13 64040519 64040583 -56243729 - ORR1E LTR MaLR -30 349 270 9 1073 440 270 65 75 chr13 64040728 64040928 -56243384 + B3A SINE B2 1 198 0 9 1073 206 0 69 0 chr13 64040936 64040965 -56243347 + (TTTTTG)n Simple_repeat Simple_repeat 4 34 0 9 1073 1163 49 14 0 chr13 64040966 64041110 -56243202 - B1_Mus2 SINE Alu -1 146 1 9 1073 338 269 26 0 chr13 64041266 64041344 -56242968 - ORR1E LTR MaLR -277 82 3 9 1073 343 271 46 9 chr13 64041628 64041736 -56242576 + MLT1J LTR MaLR 401 512 0 9 1073 382 217 9 9 chr13 64041832 64041948 -56242364 + (TG)n Simple_repeat Simple_repeat 1 116 0 9 1073 1740 213 23 17 chr13 64042730 64043084 -56241228 - ORR1D1 LTR MaLR -14 360 5 9 1073 745 275 61 60 chr13 64043230 64043541 -56240771 - B4A SINE B4 -25 267 1 1 1073 770 238 10 237 chr13 64044084 64044574 -56239738 - MTE2a LTR MaLR 0 379 1 1 1073 258 300 0 14 chr13 64045191 64045262 -56239050 + MLT1I LTR MaLR 66 135 -276 1 1073 549 250 12 37 chr13 64045374 64045536 -56238776 - RSINE1 SINE B4 -3 162 5 1 1073 297 311 38 0 chr13 64046579 64046685 -56237627 + B4A SINE B4 1 110 -182 1 1073 1534 203 89 11 chr13 64046742 64047091 -56237221 + Lx8 LINE L1 6106 6481 -992 1 1073 285 131 0 0 chr13 64047092 64047153 -56237159 + (T)n Simple_repeat Simple_repeat 1 61 0 1 1073 894 278 72 49 chr13 64047861 64048167 -56236145 + Lx8 LINE L1 6471 6783 -690 1 1073 477 0 0 0 chr13 64048171 64048224 -56236088 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1073 234 0 0 0 chr13 64048224 64048249 -56236063 + (GA)n Simple_repeat Simple_repeat 1 26 0 1 1073 356 59 0 19 chr13 64048249 64048301 -56236011 + (TAG)n Simple_repeat Simple_repeat 2 52 0 1 1073 238 241 0 0 chr13 64048640 64048698 -56235614 + L1MA8 LINE L1 6207 6264 -27 1 1073 528 176 0 0 chr13 64048939 64049041 -56235271 + GA-rich Low_complexity Low_complexity 2 103 0 1 1073 320 270 131 52 chr13 64049055 64049249 -56235063 + HAL1-3A_ME LINE L1 2284 2438 -420 1 1073 1246 41 7 0 chr13 64049495 64049642 -56234670 - B1_Mus1 SINE Alu 0 148 1 1 1073 535 169 7 34 chr13 64050229 64050376 -56233936 + GA-rich Low_complexity Low_complexity 3 145 0 1 1073 287 326 44 29 chr13 64051570 64051706 -56232606 - MIRb SINE MIR -38 230 93 1 1073 198 0 0 0 chr13 64051746 64051768 -56232544 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1073 476 72 14 0 chr13 64051768 64051837 -56232475 + (GA)n Simple_repeat Simple_repeat 2 71 0 1 1073 491 254 33 58 chr13 64051853 64051974 -56232338 - RSINE1 SINE B4 -41 124 7 1 1073 270 314 29 36 chr13 64051989 64052027 -56232285 + YREP_Mm Unknown Unknown 157 294 -1518 1 1073 485 210 10 10 chr13 64052027 64052128 -56232184 - ID_B1 SINE B4 -20 204 104 1 1073 585 0 0 0 chr13 64053718 64053783 -56230529 + (TC)n Simple_repeat Simple_repeat 1 65 0 1 1073 264 222 233 14 chr13 64054433 64054506 -56229806 + B1F2 SINE Alu 1 89 -60 1 1073 2522 92 0 0 chr13 64054517 64054844 -56229468 + ORR1A2 LTR MaLR 1 327 0 1 1073 945 232 63 141 chr13 64054883 64055294 -56229018 - MTE2a LTR MaLR 0 379 1 1 1073 1092 119 0 0 chr13 64055344 64055512 -56228800 + (TTTC)n Simple_repeat Simple_repeat 2 169 0 1 1073 905 335 10 20 chr13 64055656 64055949 -56228363 - B4A SINE B4 0 292 3 1 1073 21 57 0 0 chr13 64056371 64056406 -56227906 + AT_rich Low_complexity Low_complexity 1 35 0 1 1073 266 0 0 29 chr13 64056496 64056531 -56227781 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1 1073 353 233 151 28 chr13 64056602 64056708 -56227604 - PB1 SINE Alu -2 125 7 1 1073 639 326 159 0 chr13 64057433 64057703 -56226609 + Tigger7 DNA MER2_type 8 320 -2171 1 1073 207 162 0 0 chr13 64057735 64057772 -56226540 + CT-rich Low_complexity Low_complexity 1 37 0 1 1073 941 249 26 11 chr13 64057772 64058006 -56226306 - ID_B1 SINE B4 -46 246 8 1 1073 540 206 174 0 chr13 64058013 64058168 -56226144 + Tigger7 DNA MER2_type 2293 2470 -21 1 1073 1342 159 27 0 chr13 64058988 64059208 -56225104 + URR1A DNA MER1_type 1 226 0 1 1073 303 297 33 11 chr13 64059528 64059620 -56224692 + B1F SINE Alu 46 139 -10 1 1073 477 289 8 0 chr13 64059703 64059831 -56224481 - Tigger5 DNA MER2_type -2261 145 17 1 1073 253 282 23 12 chr13 64059884 64059970 -56224342 - Tigger16b DNA Tigger -32 305 219 1 1073 2040 211 33 165 chr13 64059970 64060483 -56223829 + RMER19C LTR ERVK 2 428 -183 1 1073 715 43 48 64 chr13 64060483 64060608 -56223704 - L1Md_F3 LINE L1 0 6584 6462 1 1073 2040 211 33 165 chr13 64060608 64060797 -56223515 + RMER19C LTR ERVK 429 611 0 1 1073 1042 170 43 104 chr13 64060833 64061177 -56223135 + RLTRETN_Mm LTR ERVK 1 409 0 1 1073 612 268 114 24 chr13 64061251 64061461 -56222851 + B4A SINE B4 2 230 -62 1 1073 991 180 15 127 chr13 64061792 64062059 -56222253 - RMER19C LTR ERVK -2 609 373 1 1073 555 210 0 0 chr13 64062055 64062207 -56222105 - RMER19C LTR ERVK -363 248 1 1 1073 714 301 47 47 chr13 64062591 64062870 -56221442 - MER2 DNA MER2_type -65 280 2 1 1073 660 26 0 0 chr13 64063589 64063667 -56220645 + (GAAA)n Simple_repeat Simple_repeat 1 78 0 1 1073 869 268 122 22 chr13 64063747 64063783 -56220529 + RMER5 LTR ERV1 112 143 -391 1 1073 2223 126 6 0 chr13 64063783 64064108 -56220204 - ORR1A2 LTR MaLR 0 327 1 1 1073 869 268 122 22 chr13 64064108 64064441 -56219871 + RMER5 LTR ERV1 144 518 -16 1 1073 477 0 0 0 chr13 64064778 64064831 -56219481 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1073 216 0 0 0 chr13 64065680 64065704 -56218608 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1073 280 291 23 0 chr13 64065933 64066019 -56218293 - Lx8 LINE L1 -2 7471 7384 1 1073 342 232 22 11 chr13 64066022 64066121 -56218191 + MTEb LTR MaLR 270 378 -1 1 1073 274 255 178 13 chr13 64066121 64066381 -56217931 - L1M4b LINE L1 -671 6367 6062 1 1073 185 196 0 21 chr13 64066387 64066434 -56217878 + CT-rich Low_complexity Low_complexity 4 49 0 1 1073 406 292 216 0 chr13 64066614 64066915 -56217397 - L1M4b LINE L1 -1501 5505 5140 1 1073 300 91 0 0 chr13 64066915 64066959 -56217353 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1073 365 276 128 26 chr13 64067166 64067316 -56216996 - B4 SINE B4 -52 240 75 1 1073 2863 77 2 12 chr13 64067316 64067726 -56216586 - MTB_Mm LTR MaLR 0 407 2 1 1073 1815 270 131 25 chr13 64067781 64068809 -56215503 - L1M4b LINE L1 -1900 5106 3970 1 1073 283 376 9 0 chr13 64068809 64068918 -56215394 - PB1D10 SINE Alu -2 115 6 1 1073 613 283 74 80 chr13 64068922 64069065 -56215247 - L1M4b LINE L1 -3105 3901 3769 1 1073 318 253 13 0 chr13 64069065 64069144 -56215168 - ID4_ SINE ID 0 83 4 1 1073 613 283 74 80 chr13 64069144 64069365 -56214947 - L1M4b LINE L1 -3238 3768 3539 1 1073 816 271 19 14 chr13 64069441 64069654 -56214658 - B3 SINE B2 -2 214 1 1 1073 22 0 0 0 chr13 64069832 64069854 -56214458 + AT_rich Low_complexity Low_complexity 1 22 0 1 1073 1870 132 138 18 chr13 64069860 64070200 -56214112 - ORR1C2 LTR MaLR -3 381 1 1 1073 537 293 172 54 chr13 64070230 64070752 -56213560 - L1M4b LINE L1 -4603 2731 2097 1 1073 240 292 14 27 chr13 64070937 64071011 -56213301 - B3A SINE B2 -125 73 1 1 1073 197 132 26 0 chr13 64071161 64071199 -56213113 + CT-rich Low_complexity Low_complexity 2 40 0 1 1073 277 209 45 0 chr13 64071786 64071853 -56212459 - Tigger7 DNA MER2_type -9 2482 2413 1 1073 263 239 41 52 chr13 64071866 64071963 -56212349 - Tigger7 DNA MER2_type -1444 1047 952 1 1073 1303 236 84 0 chr13 64071950 64072234 -56212078 - Tigger7 DNA MER2_type -2147 344 37 1 1073 741 250 32 16 chr13 64072247 64072434 -56211878 + ORR1E LTR MaLR 3 192 -167 1 1073 239 254 30 0 chr13 64072503 64072570 -56211742 + ORR1E LTR MaLR 288 356 -23 1 1073 261 0 0 0 chr13 64073736 64073765 -56210547 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1073 1134 92 0 0 chr13 64073765 64073938 -56210374 + (TG)n Simple_repeat Simple_repeat 1 174 0 1 1073 277 243 0 51 chr13 64073963 64074041 -56210271 - B3 SINE B2 -127 89 16 1 1073 431 217 9 0 chr13 64074477 64074583 -56209729 + CT-rich Low_complexity Low_complexity 2 108 0 1 1073 711 184 43 14 chr13 64074599 64074737 -56209575 - B1_Mm SINE Alu -1 146 5 1 1073 902 221 40 15 chr13 64074845 64075047 -56209265 + B3 SINE B2 4 210 -6 1 1073 49 32 0 0 chr13 64075047 64075110 -56209202 + AT_rich Low_complexity Low_complexity 1 63 0 1 1073 737 247 24 0 chr13 64075116 64075286 -56209026 + B3A SINE B2 1 174 -24 1 1073 718 278 31 20 chr13 64075673 64075868 -56208444 + B3A SINE B2 2 198 0 1 1073 1359 87 0 16 chr13 64076597 64076784 -56207528 + B2_Mm2 SINE B2 1 184 -11 1 1073 225 240 346 0 chr13 64077426 64077530 -56206782 - MLT1C LTR MaLR -36 354 215 1 1073 429 100 39 20 chr13 64077584 64077686 -56206626 + (TCTCTG)n Simple_repeat Simple_repeat 3 106 0 1 1073 283 292 54 63 chr13 64077686 64077891 -56206421 - MLT1C LTR MaLR -222 245 43 1 1073 715 243 135 84 chr13 64078901 64078970 -56205342 - B4 SINE B4 -4 288 222 1 1073 195 42 0 0 chr13 64078970 64078994 -56205318 + (TGG)n Simple_repeat Simple_repeat 1 24 0 1 1073 302 0 26 0 chr13 64079001 64079039 -56205273 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1073 715 243 135 84 chr13 64079039 64079235 -56205077 - B4 SINE B4 -77 215 1 1 1073 209 176 0 0 chr13 64079580 64079614 -56204698 + GA-rich Low_complexity Low_complexity 2 35 0 1 1073 1140 75 7 0 chr13 64079932 64080079 -56204233 - B1_Mus1 SINE Alu 0 148 1 1 1073 917 233 26 0 chr13 64082513 64082706 -56201606 + B3A SINE B2 1 198 0 1 1073 25 0 0 0 chr13 64082706 64082731 -56201581 + AT_rich Low_complexity Low_complexity 1 25 0 1 1073 203 267 112 19 chr13 64082934 64083041 -56201271 + MER5A DNA MER1_type 68 184 -5 1 1073 906 232 74 0 chr13 64083358 64083548 -56200764 - ID_B1 SINE B4 -18 206 3 1 1073 488 307 12 12 chr13 64084160 64084328 -56199984 - RCHARR1 DNA MER1_type -687 287 120 1 1073 592 283 16 26 chr13 64084412 64084604 -56199708 + B3A SINE B2 2 191 -7 1 1073 777 218 35 30 chr13 64084619 64084818 -56199494 + B3 SINE B2 7 206 -10 1 1073 727 104 0 0 chr13 64084818 64084924 -56199388 + B2_Mm2 SINE B2 2 107 -88 1 1073 201 147 0 0 chr13 64085003 64085037 -56199275 + (GAAA)n Simple_repeat Simple_repeat 2 35 0 1 1073 1251 48 0 0 chr13 64085251 64085398 -56198914 + B1_Mm SINE Alu 1 147 0 1 1073 195 184 0 0 chr13 64087353 64087391 -56196921 + GA-rich Low_complexity Low_complexity 3 40 0 1 1073 266 320 85 85 chr13 64087584 64087748 -56196564 + B4 SINE B4 2 165 -127 1 1073 189 74 0 0 chr13 64087810 64087837 -56196475 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1073 325 226 224 0 chr13 64088392 64088495 -56195817 + B4A SINE B4 154 270 -22 1 1073 1292 266 73 35 chr13 64088690 64089235 -56195077 + L1_Mur3 LINE L1 3902 4467 -1413 1 1073 708 243 225 10 chr13 64089463 64089866 -56194446 + MER89 LTR ERV1 69 559 0 1 1073 561 307 108 22 chr13 64090446 64090669 -56193643 - B4 SINE B4 -2 290 49 1 1073 269 208 0 0 chr13 64090673 64090726 -56193586 - L1M3 LINE L1 -541 5630 5578 1 1073 265 254 8 106 chr13 64090727 64090850 -56193462 + L1M4 LINE L1 5327 5437 -737 1 1073 1129 51 0 0 chr13 64090915 64091052 -56193260 + B1_Mm SINE Alu 2 138 -9 1 1073 284 64 0 21 chr13 64091052 64091100 -56193212 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1073 697 193 0 33 chr13 64091289 64091439 -56192873 + B1_Mur1 SINE Alu 4 148 -1 2 1073 669 269 88 5 chr13 64091443 64091637 -56192675 + ID_B1 SINE B4 2 211 -13 2 1073 29 28 0 0 chr13 64091637 64091673 -56192639 + AT_rich Low_complexity Low_complexity 1 36 0 2 1073 198 248 115 29 chr13 64092369 64092473 -56191839 - L2b LINE L2 -10 3365 3253 2 1073 742 197 0 58 chr13 64092688 64092833 -56191479 + B1_Mus2 SINE Alu 1 137 -10 2 1073 321 26 0 0 chr13 64092833 64092871 -56191441 + (CAAAG)n Simple_repeat Simple_repeat 2 39 0 2 1073 511 258 69 114 chr13 64092932 64093221 -56191091 + MLT1A LTR MaLR 94 369 -5 2 1073 899 176 0 0 chr13 64093551 64093704 -56190608 + MTC LTR MaLR 1 153 -268 2 1073 441 137 0 0 chr13 64093704 64093777 -56190535 + MTC LTR MaLR 347 419 0 2 1073 655 282 140 5 chr13 64093791 64094005 -56190307 + B4A SINE B4 39 281 -11 2 134 270 283 121 0 chr13 64094143 64094242 -56190070 + MER5A DNA MER1_type 13 123 -66 2 1074 197 164 30 0 chr13 64094788 64094855 -56189457 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 2 1074 420 185 23 11 chr13 64094882 64095057 -56189255 + (TCTCTG)n Simple_repeat Simple_repeat 2 178 0 2 1074 540 0 0 0 chr13 64095862 64095922 -56188390 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 1074 510 17 0 0 chr13 64096675 64096734 -56187578 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 1074 301 170 0 0 chr13 64096781 64096828 -56187484 - Lx8 LINE L1 -601 6872 6826 2 1074 227 31 31 0 chr13 64096887 64096919 -56187393 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 2 1074 764 229 0 0 chr13 64096921 64097061 -56187251 - B1_Mur2 SINE Alu -9 140 1 2 1074 274 158 51 34 chr13 64097082 64097141 -56187171 - L1M5 LINE L1 -3128 3018 2959 2 1074 261 57 0 0 chr13 64097200 64097235 -56187077 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2 1074 257 234 25 25 chr13 64097381 64097460 -56186852 - RLTR25B LTR ERVK -508 520 442 2 1074 806 47 0 0 chr13 64097392 64097499 -56186813 - B1_Mm SINE Alu -39 108 2 2 1074 273 227 55 0 chr13 64097393 64097521 -56186791 - ORR1B1-int LTR MaLR -755 754 620 2 1074 255 359 70 29 chr13 64097596 64097768 -56186544 + MER58A DNA MER1_type 4 182 -42 2 1074 660 86 0 0 chr13 64098715 64098820 -56185492 + (TG)n Simple_repeat Simple_repeat 2 106 0 2 1074 2038 296 33 15 chr13 64098827 64099441 -56184871 + Lx8 LINE L1 6194 6818 -655 2 1074 374 216 104 67 chr13 64100371 64100535 -56183777 + B4A SINE B4 123 292 0 2 1074 223 200 0 0 chr13 64100584 64100624 -56183688 + RSINE1 SINE B4 12 51 -114 2 1074 288 0 0 0 chr13 64100663 64100695 -56183617 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1074 412 174 81 0 chr13 64100712 64100798 -56183514 - MTD LTR MaLR -281 138 46 2 1074 272 270 144 11 chr13 64100796 64100886 -56183426 - MTEa LTR MaLR -257 122 21 2 1074 306 0 0 0 chr13 64101230 64101264 -56183048 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1074 893 225 182 40 chr13 64101712 64102036 -56182276 - ORR1D2 LTR MaLR 0 370 1 2 1074 231 237 0 33 chr13 64102636 64102697 -56181615 - ORR1E LTR MaLR -34 345 287 2 1074 248 308 67 17 chr13 64102824 64102943 -56181369 - ORR1E LTR MaLR -210 149 25 2 1074 372 43 0 0 chr13 64103502 64103548 -56180764 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1074 366 183 0 0 chr13 64104854 64104925 -56179387 + A-rich Low_complexity Low_complexity 1 71 0 2 1074 395 301 54 106 chr13 64106044 64106393 -56177919 - L1MC1 LINE L1 0 6333 6003 2 1074 229 120 0 57 chr13 64107339 64107392 -56176920 + GA-rich Low_complexity Low_complexity 2 51 0 2 1074 1200 94 77 6 chr13 64107483 64107664 -56176648 + B2_Mm2 SINE B2 1 194 -1 2 1074 438 69 0 0 chr13 64107664 64107722 -56176590 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1074 1515 28 0 0 chr13 64107724 64107904 -56176408 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2 1074 850 255 36 0 chr13 64107923 64108119 -56176193 - ID_B1 SINE B4 -21 203 1 2 1074 656 255 244 81 chr13 64108240 64108558 -56175754 + MTE2a LTR MaLR 3 372 -7 2 1074 316 333 49 19 chr13 64108893 64109055 -56175257 - MER5A DNA MER1_type -10 179 13 2 1074 258 32 0 0 chr13 64110065 64110096 -56174216 + (TG)n Simple_repeat Simple_repeat 1 31 0 2 1074 329 145 0 16 chr13 64110110 64110173 -56174139 + (TA)n Simple_repeat Simple_repeat 1 62 0 2 1074 695 306 54 39 chr13 64110355 64110634 -56173678 + B4A SINE B4 3 285 -7 2 1074 22 0 0 0 chr13 64110709 64110731 -56173581 + AT_rich Low_complexity Low_complexity 1 22 0 2 1074 647 255 14 0 chr13 64111880 64112018 -56172294 + B4A SINE B4 91 230 -62 2 1074 336 277 99 0 chr13 64112018 64112119 -56172193 + RSINE1 SINE B4 2 112 -53 2 1074 225 318 16 0 chr13 64112283 64112346 -56171966 + B4A SINE B4 229 292 0 2 1074 238 299 13 0 chr13 64112358 64112435 -56171877 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1074 547 293 34 48 chr13 64113000 64113208 -56171104 + MER102b DNA MER1_type 8 212 -129 2 1074 363 212 299 0 chr13 64113346 64113483 -56170829 - MER63A DNA AcHobo -4 206 29 2 1074 450 0 0 0 chr13 64113557 64113607 -56170705 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2 1074 479 232 67 79 chr13 64113625 64113789 -56170523 - RSINE1 SINE B4 -3 162 1 2 1074 876 90 0 0 chr13 64113792 64113937 -56170375 + (GTTTG)n Simple_repeat Simple_repeat 2 146 0 2 1074 589 259 90 93 chr13 64113960 64114250 -56170062 + B4 SINE B4 2 290 -2 2 1074 657 298 12 0 chr13 64115774 64115945 -56168367 + ID_B1 SINE B4 24 196 -28 2 1074 324 0 0 0 chr13 64116007 64116043 -56168269 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 2 1074 326 304 11 0 chr13 64116053 64116145 -56168167 - L2a LINE L2 0 3426 3334 2 1074 1237 226 74 34 chr13 64116506 64116858 -56167454 - MTD LTR MaLR -48 371 6 2 1074 625 242 69 63 chr13 64118495 64118654 -56165658 - B3A SINE B2 0 198 39 2 1074 900 255 70 46 chr13 64119316 64119600 -56164712 - B4A SINE B4 0 292 2 2 1074 180 363 31 24 chr13 64120487 64120614 -56163698 + L2 LINE L2 2648 2775 -644 2 1074 189 0 0 0 chr13 64122787 64122808 -56161504 + (TA)n Simple_repeat Simple_repeat 1 21 0 2 1074 275 357 92 17 chr13 64122965 64123139 -56161173 + MLT1I LTR MaLR 101 287 -124 2 1074 188 200 14 0 chr13 64123150 64123220 -56161092 + CT-rich Low_complexity Low_complexity 4 74 0 2 1074 564 211 24 0 chr13 64123232 64123398 -56160914 + CT-rich Low_complexity Low_complexity 4 173 0 2 1074 211 271 0 0 chr13 64123405 64123453 -56160859 - PB1D10 SINE Alu -41 76 29 2 1074 252 257 0 14 chr13 64123466 64123537 -56160775 + MLT1I LTR MaLR 340 409 -2 2 1074 522 278 159 20 chr13 64123807 64124002 -56160310 + B4A SINE B4 70 291 -1 2 1074 233 244 0 22 chr13 64124015 64124107 -56160205 + GA-rich Low_complexity Low_complexity 6 95 0 2 1074 242 185 31 0 chr13 64124887 64124952 -56159360 + CT-rich Low_complexity Low_complexity 1 67 0 2 1074 611 282 105 62 chr13 64125022 64125108 -56159204 + B4A SINE B4 4 98 -194 2 1074 1149 51 0 0 chr13 64125108 64125246 -56159066 + B1_Mus2 SINE Alu 1 138 -9 2 1074 219 36 0 0 chr13 64125246 64125274 -56159038 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 2 1074 611 282 105 62 chr13 64125274 64125462 -56158850 + B4A SINE B4 99 290 -2 2 1074 306 321 102 97 chr13 64126653 64127201 -56157111 - L1M5 LINE L1 -2044 4102 3552 2 1074 313 252 32 65 chr13 64127221 64127344 -56156968 + L1MD3 LINE L1 7283 7401 -594 2 1074 609 14 0 0 chr13 64127391 64127461 -56156851 + (TC)n Simple_repeat Simple_repeat 1 70 0 2 1074 408 20 0 0 chr13 64127461 64127509 -56156803 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1074 390 252 30 30 chr13 64127593 64127724 -56156588 - ID_B1 SINE B4 -93 131 1 2 1074 2174 264 77 32 chr13 64127926 64128637 -56155675 - Lx8 LINE L1 -2 7471 6729 2 1074 1520 163 91 37 chr13 64128928 64129309 -56155003 + RMER16 LTR ERVK 1 533 0 2 1074 394 189 0 40 chr13 64129483 64129582 -56154730 + B1F SINE Alu 35 129 -20 2 1074 316 326 40 0 chr13 64130025 64130131 -56154181 + B1F SINE Alu 1 108 -12 2 1074 333 297 0 0 chr13 64130737 64130838 -56153474 + MER2 DNA MER2_type 128 228 -117 2 1074 823 142 0 36 chr13 64130839 64130978 -56153334 + B1_Mur4 SINE Alu 15 148 -2 2 1074 495 0 0 0 chr13 64130978 64131033 -56153279 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1074 394 262 57 159 chr13 64131234 64131323 -56152989 + B4 SINE B4 4 85 -207 2 1074 1134 122 39 0 chr13 64131323 64131504 -56152808 + B2_Mm1a SINE B2 1 188 -5 2 1074 700 182 14 34 chr13 64131511 64131659 -56152653 + B1_Mus2 SINE Alu 1 145 -2 2 1074 787 192 82 46 chr13 64131687 64131883 -56152429 + B3 SINE B2 14 216 0 2 1074 207 0 0 0 chr13 64132470 64132493 -56151819 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1074 531 313 42 19 chr13 64132924 64133139 -56151173 + B4A SINE B4 1 220 -72 2 1074 2716 104 63 47 chr13 64133210 64133324 -56150988 + RLTR11B LTR ERVK 1 134 -319 2 1074 1154 56 0 7 chr13 64133324 64133468 -56150844 + B1_Mus2 SINE Alu 1 143 -4 2 1074 486 0 0 0 chr13 64133471 64133525 -56150787 + (TAAA)n Simple_repeat Simple_repeat 4 57 0 2 1074 2716 104 63 47 chr13 64133525 64133852 -56150460 + RLTR11B LTR ERVK 135 453 0 2 1074 1127 171 98 0 chr13 64133997 64134202 -56150110 - URR1B DNA MER1_type 0 225 1 2 1074 232 231 0 55 chr13 64134453 64134508 -56149804 + tRNA-Ala-GCY_ tRNA tRNA 17 68 -7 2 1074 555 288 79 6 chr13 64134617 64134795 -56149517 + ID_B1 SINE B4 3 193 -31 2 1074 337 281 70 8 chr13 64135137 64135266 -56149046 + ORR1E LTR MaLR 1 137 -222 2 1074 348 331 56 6 chr13 64135638 64135799 -56148513 - L2b LINE L2 -250 3125 2957 2 1074 686 278 43 22 chr13 64136056 64136240 -56148072 - B3 SINE B2 -27 189 2 2 1074 751 249 32 18 chr13 64137081 64137302 -56147010 + ID_B1 SINE B4 1 224 0 3 1074 484 180 0 0 chr13 64137696 64137785 -56146527 - ID_B1 SINE B4 0 224 136 3 1074 472 241 120 8 chr13 64138246 64138363 -56145949 + RSINE1 SINE B4 17 146 -19 3 1074 221 0 35 0 chr13 64138926 64138955 -56145357 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1074 342 0 0 0 chr13 64138955 64138993 -56145319 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 3 1074 931 57 0 0 chr13 64138993 64139117 -56145195 - B1_Mus1 SINE Alu -7 141 18 3 1074 264 180 281 0 chr13 64139859 64139948 -56144364 - ID_B1 SINE B4 -5 219 106 3 1074 244 317 130 34 chr13 64140051 64140289 -56144023 - MLT1B LTR MaLR -126 264 4 3 1074 763 252 243 30 chr13 64142207 64142510 -56141802 + RMER15 LTR ERVL 1 371 -204 3 1074 369 0 0 0 chr13 64142510 64142551 -56141761 + (TTG)n Simple_repeat Simple_repeat 3 43 0 3 1074 763 252 243 30 chr13 64142551 64142721 -56141591 + RMER15 LTR ERVL 372 575 0 3 1074 25 0 0 0 chr13 64142993 64143018 -56141294 + AT_rich Low_complexity Low_complexity 1 25 0 3 1074 638 172 0 8 chr13 64143020 64143149 -56141163 + (TA)n Simple_repeat Simple_repeat 1 128 0 3 1074 2618 35 0 3 chr13 64143152 64143491 -56140821 - ORR1A1 LTR MaLR -8 338 1 3 1074 12899 66 45 4 chr13 64143491 64145212 -56139100 - ORR1A1-int LTR MaLR 0 1792 1 3 1074 1613 71 0 22 chr13 64145214 64145445 -56138867 - ORR1A1 LTR MaLR -2 344 119 3 1074 758 197 7 0 chr13 64145458 64145600 -56138712 - B3A SINE B2 -55 143 1 3 1074 305 121 0 49 chr13 64145703 64145733 -56138579 + polypurine Low_complexity Low_complexity 3 32 0 3 1074 1221 106 0 0 chr13 64145733 64145913 -56138399 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1074 305 121 0 49 chr13 64145913 64145943 -56138369 + polypurine Low_complexity Low_complexity 33 60 0 3 1074 1151 99 5 0 chr13 64145943 64146166 -56138146 + (GGAA)n Simple_repeat Simple_repeat 1 224 0 3 1074 2802 86 3 3 chr13 64146185 64146546 -56137766 + Lx2B LINE L1 6455 6815 -185 3 1074 234 128 0 0 chr13 64146675 64146714 -56137598 + (CAA)n Simple_repeat Simple_repeat 1 39 0 3 1074 272 335 222 14 chr13 64146857 64147024 -56137288 + MLT1G3 LTR MaLR 263 477 -118 3 1074 6672 56 4 4 chr13 64147024 64147832 -56136480 - RLTR13C2 LTR ERVK 0 808 1 3 1074 272 335 222 14 chr13 64147832 64147885 -56136427 + MLT1G3 LTR MaLR 478 529 -66 3 1074 1336 87 22 0 chr13 64147907 64148092 -56136220 + B2_Mm1t SINE B2 2 190 -3 3 1074 2307 111 6 0 chr13 64148202 64148526 -56135786 + ORR1A3 LTR MaLR 1 326 0 3 1074 262 318 126 6 chr13 64148566 64148740 -56135572 + Tigger13a DNA MER2_type 155 349 -422 3 1074 254 319 51 42 chr13 64148949 64149067 -56135245 - MLT1A0 LTR MaLR -246 119 1 3 1074 841 237 88 37 chr13 64149106 64149378 -56134934 + Tigger13a DNA MER2_type 388 673 -98 3 1074 557 308 73 10 chr13 64149381 64149670 -56134642 + L1ME2z LINE L1 5613 5919 -525 3 1074 387 0 0 0 chr13 64150146 64150189 -56134123 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1074 600 14 0 0 chr13 64150189 64150257 -56134055 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1074 359 305 118 37 chr13 64150259 64150395 -56133917 + B4A SINE B4 86 232 -60 3 1074 296 311 113 48 chr13 64150451 64150823 -56133489 + L1MB5 LINE L1 5477 5894 -284 3 1074 301 239 0 0 chr13 64150843 64150914 -56133398 + PB1D10 SINE Alu 32 102 -15 3 1074 311 238 40 87 chr13 64150934 64151111 -56133201 + L1MB5 LINE L1 5945 6120 -58 3 1074 301 270 11 0 chr13 64151115 64151204 -56133108 + (TG)n Simple_repeat Simple_repeat 1 90 0 3 1074 503 295 47 0 chr13 64151269 64151418 -56132894 - B4A SINE B4 -135 157 2 3 1074 536 280 0 31 chr13 64151699 64151828 -56132484 + RSINE1 SINE B4 4 128 -37 3 1074 261 299 93 0 chr13 64152846 64152943 -56131369 - ORR1E LTR MaLR -250 109 4 3 1074 1388 240 80 8 chr13 64152954 64153111 -56131201 - MTD LTR MaLR -14 405 245 3 1074 4934 45 5 0 chr13 64153111 64153695 -56130617 - LTRIS_Mus LTR ERV1 0 587 1 3 1074 1388 240 80 8 chr13 64153695 64153898 -56130414 - MTD LTR MaLR -175 244 19 3 1074 378 0 0 0 chr13 64153898 64153940 -56130372 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 3 1074 449 228 96 0 chr13 64153949 64154085 -56130227 - MTD-int LTR MaLR 0 1258 1110 3 1074 838 153 20 27 chr13 64154111 64154259 -56130053 + B1_Mm SINE Alu 1 147 0 3 1074 1507 187 134 78 chr13 64154342 64154766 -56129546 + RLTR25B LTR ERVK 1 448 -580 3 1074 575 143 43 146 chr13 64155356 64155520 -56128792 + RLTR25B LTR ERVK 620 766 -262 3 1074 429 214 93 8 chr13 64155509 64155627 -56128685 + RLTR25B LTR ERVK 898 1025 -3 3 1074 2149 225 119 101 chr13 64155633 64155955 -56128357 - MTD-int LTR MaLR -242 1016 572 3 1074 3026 167 174 3 chr13 64155955 64156581 -56127731 + RMER19A LTR ERVK 5 737 0 3 1074 2149 218 25 96 chr13 64156581 64157159 -56127153 - MTD-int LTR MaLR -687 571 10 3 1074 746 187 237 5 chr13 64157185 64157423 -56126889 - MTD LTR MaLR -37 382 78 3 1074 227 216 0 19 chr13 64157465 64157517 -56126795 + MLT1G3 LTR MaLR 1 51 -544 3 1074 446 343 94 20 chr13 64157682 64157951 -56126361 + MLT1G3 LTR MaLR 180 454 -141 3 1074 470 270 9 0 chr13 64158435 64158546 -56125766 - B1F2 SINE Alu -30 119 8 3 1074 566 318 59 26 chr13 64158642 64158913 -56125399 - B4A SINE B4 -12 280 1 3 1074 1387 73 11 0 chr13 64158939 64159116 -56125196 + B2_Mm1t SINE B2 1 179 -14 3 1074 362 127 0 0 chr13 64159141 64159196 -56125116 + B2_Mm2 SINE B2 47 101 -94 3 1074 208 190 17 33 chr13 64159814 64159874 -56124438 + (CACCC)n Simple_repeat Simple_repeat 3 61 0 3 1074 211 200 169 0 chr13 64161171 64161236 -56123076 + ID4_ SINE ID 2 77 -6 3 1074 400 70 268 0 chr13 64161258 64161329 -56122983 + BC1_Mm scRNA scRNA 2 91 -61 3 1074 1223 95 0 140 chr13 64161332 64161371 -56122941 + B2_Mm1a SINE B2 2 34 -159 3 1074 1175 62 7 0 chr13 64161371 64161517 -56122795 + B1_Mus1 SINE Alu 2 148 0 3 1074 1223 95 0 140 chr13 64161517 64161698 -56122614 + B2_Mm1a SINE B2 35 191 -2 3 1074 337 252 81 0 chr13 64161791 64161890 -56122422 + PB1D10 SINE Alu 1 107 -10 3 1074 230 100 59 20 chr13 64162236 64162287 -56122025 + A-rich Low_complexity Low_complexity 3 55 0 3 1074 468 35 0 0 chr13 64162353 64162411 -56121901 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1074 315 113 0 0 chr13 64162420 64162473 -56121839 + (TC)n Simple_repeat Simple_repeat 1 53 0 3 1074 185 325 46 46 chr13 64162850 64162937 -56121375 - MIR SINE MIR -118 144 58 3 1074 399 162 0 0 chr13 64163063 64163143 -56121169 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 1074 707 272 10 82 chr13 64163546 64163663 -56120649 - ID_B1 SINE B4 -21 203 90 3 1074 1159 109 80 6 chr13 64163663 64163838 -56120474 - B2_Mm2 SINE B2 -5 190 3 3 1074 707 272 10 82 chr13 64163838 64163928 -56120384 - ID SINE ID -135 89 11 3 1074 180 97 0 0 chr13 64164698 64164729 -56119583 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1074 419 307 8 26 chr13 64164946 64165063 -56119249 - B1F SINE Alu -6 143 29 3 1074 1096 234 44 52 chr13 64166541 64166884 -56117428 + MTEb LTR MaLR 1 340 -39 3 1074 861 194 0 0 chr13 64166885 64167065 -56117247 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1074 735 208 0 0 chr13 64167089 64167342 -56116970 + (TG)n Simple_repeat Simple_repeat 1 253 0 3 1074 655 272 79 67 chr13 64167343 64167583 -56116729 - B4A SINE B4 0 292 50 3 1074 625 278 146 49 chr13 64168797 64169043 -56115269 - B4 SINE B4 -22 270 1 3 1074 380 223 143 41 chr13 64169172 64169368 -56114944 - MER44A DNA MER2_type -25 314 99 3 1074 381 329 136 12 chr13 64169880 64170049 -56114263 + Tigger5 DNA MER2_type 2 191 -2215 3 1074 236 227 54 43 chr13 64170096 64170188 -56114124 + Tigger5 DNA MER2_type 2295 2387 -19 3 1074 1087 248 123 16 chr13 64171166 64171531 -56112781 + MTD LTR MaLR 2 405 -14 3 1074 289 297 0 0 chr13 64171823 64171897 -56112415 + MER2 DNA MER2_type 1 74 -271 3 1074 432 283 7 86 chr13 64171918 64172069 -56112243 + Lx8 LINE L1 7206 7344 -129 3 1074 762 264 146 7 chr13 64172083 64172384 -56111928 + Lx8 LINE L1 7047 7389 -84 3 1074 409 318 166 0 chr13 64172702 64172925 -56111387 + MER2 DNA MER2_type 82 341 -4 3 1074 875 225 109 47 chr13 64173616 64173891 -56110421 + B4A SINE B4 1 292 0 3 1074 1084 125 65 0 chr13 64173964 64174132 -56110180 + B2_Mm1t SINE B2 1 179 -14 3 1074 352 78 316 9 chr13 64174198 64174312 -56110000 + B2_Mm2 SINE B2 47 195 0 3 1074 307 333 10 20 chr13 64174335 64174436 -56109876 - PB1D10 SINE Alu -17 100 1 3 1074 456 271 50 0 chr13 64174436 64174486 -56109826 - ID SINE ID -142 82 26 3 1074 568 269 15 0 chr13 64174865 64174999 -56109313 - RSINE1 SINE B4 0 165 30 3 1074 647 278 31 0 chr13 64175344 64175506 -56108806 + B3A SINE B2 3 169 -29 3 1074 546 67 0 0 chr13 64175509 64175584 -56108728 + (CA)n Simple_repeat Simple_repeat 1 75 0 3 1074 261 273 34 11 chr13 64175873 64175962 -56108350 - MIRb SINE MIR -82 186 96 3 1074 3188 44 0 8 chr13 64176600 64176988 -56107324 + L1_Mus1 LINE L1 6181 6565 -2 3 1074 890 182 189 22 chr13 64177089 64177274 -56107038 - B3 SINE B2 0 216 1 3 1074 746 283 94 4 chr13 64178013 64178247 -56106065 - B4 SINE B4 -35 257 3 3 1074 962 216 43 19 chr13 64179020 64179228 -56105084 + B3 SINE B2 1 213 -3 3 1074 24 53 0 0 chr13 64179249 64179287 -56105025 + AT_rich Low_complexity Low_complexity 1 38 0 3 1074 500 250 144 30 chr13 64179362 64179494 -56104818 + B1_Mur2 SINE Alu 2 148 -1 3 1074 235 91 0 52 chr13 64179495 64179553 -56104759 + (CAAAAA)n Simple_repeat Simple_repeat 4 58 0 3 1074 781 117 49 49 chr13 64179553 64179697 -56104615 + B1_Mur3 SINE Alu 4 147 -2 3 1074 232 257 103 51 chr13 64179766 64179922 -56104390 + L1M5 LINE L1 3498 3661 -2485 3 1074 243 0 0 0 chr13 64181053 64181080 -56103232 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1074 594 195 9 0 chr13 64181142 64181255 -56103057 + B3A SINE B2 2 115 -83 3 1074 866 159 0 0 chr13 64181660 64181798 -56102514 + B1_Mus1 SINE Alu 3 140 -8 3 1074 242 250 0 0 chr13 64183510 64183562 -56100750 + B4 SINE B4 115 166 -126 3 1074 220 194 0 0 chr13 64183585 64183621 -56100691 + polypurine Low_complexity Low_complexity 1 36 0 3 1074 287 221 136 23 chr13 64183768 64183856 -56100456 - L1MDa LINE L1 -5169 1464 1367 3 1074 347 284 85 38 chr13 64183856 64183962 -56100350 + ID_B1 SINE B4 72 182 -42 3 1074 525 71 0 0 chr13 64183997 64184067 -56100245 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 1074 207 0 0 0 chr13 64184072 64184095 -56100217 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 3 1074 910 236 14 28 chr13 64184151 64184365 -56099947 - B3 SINE B2 -5 211 1 4 1074 381 250 22 28 chr13 64185473 64185654 -56098658 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1074 360 64 0 0 chr13 64185681 64185728 -56098584 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1074 210 37 0 0 chr13 64185797 64185824 -56098488 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1074 416 134 10 0 chr13 64185824 64185921 -56098391 + (GA)n Simple_repeat Simple_repeat 2 99 0 4 1074 402 260 100 0 chr13 64185930 64186030 -56098282 - RSINE1 SINE B4 -31 134 25 4 1074 289 379 57 7 chr13 64186426 64186567 -56097745 + MLT1A LTR MaLR 9 156 -218 4 1074 599 263 22 0 chr13 64186946 64187083 -56097229 + RSINE1 SINE B4 2 141 -24 4 1074 297 100 0 0 chr13 64187085 64187135 -56097177 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1074 401 310 93 19 chr13 64187454 64187615 -56096697 - B4A SINE B4 -2 290 118 4 1074 976 96 0 0 chr13 64187720 64187856 -56096456 - B1_Mur2 SINE Alu -5 144 9 4 1074 420 244 25 25 chr13 64187852 64187970 -56096342 + B3A SINE B2 75 192 -6 4 1074 1441 91 0 0 chr13 64188052 64188239 -56096073 - B2_Mm2 SINE B2 -8 187 1 4 1074 315 257 188 0 chr13 64188348 64188449 -56095863 + PB1 SINE Alu 1 120 -7 4 1074 212 162 0 0 chr13 64188720 64188757 -56095555 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1074 22 70 0 0 chr13 64189929 64189972 -56094340 + AT_rich Low_complexity Low_complexity 1 43 0 4 1074 1313 151 114 38 chr13 64190921 64191237 -56093075 + Lx9 LINE L1 7178 7517 -127 4 1074 437 18 35 0 chr13 64191266 64191323 -56092989 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 4 1074 32 26 0 0 chr13 64191476 64191515 -56092797 + AT_rich Low_complexity Low_complexity 1 39 0 4 1074 898 264 10 0 chr13 64191715 64191908 -56092404 + ID_B1 SINE B4 2 196 -28 4 1074 251 212 71 48 chr13 64191882 64191966 -56092346 + B1_Mur1 SINE Alu 64 149 0 4 1074 1358 300 115 35 chr13 64192031 64192205 -56092107 - L1M4b LINE L1 -2048 4955 4780 4 1074 1104 98 91 6 chr13 64192205 64192380 -56091932 - B2_Mm1t SINE B2 -2 191 2 4 1074 1358 300 115 35 chr13 64192380 64193072 -56091240 - L1M4b LINE L1 -2224 4779 4019 4 1074 356 225 33 11 chr13 64193256 64193346 -56090966 - L1M4b LINE L1 -6391 943 852 4 1074 2607 154 12 0 chr13 64193441 64193857 -56090455 + MTC LTR MaLR 1 421 0 4 1074 624 247 29 134 chr13 64193938 64194214 -56090098 - ORR1E LTR MaLR 0 359 113 4 1074 437 257 19 9 chr13 64194598 64194704 -56089608 - RSINE1 SINE B4 -36 129 23 4 1074 306 282 105 0 chr13 64195137 64195261 -56089051 + ID_B1 SINE B4 16 152 -72 4 1074 559 218 97 0 chr13 64195348 64195472 -56088840 + B1_Mur1 SINE Alu 1 136 -13 4 1074 684 0 0 0 chr13 64195472 64195548 -56088764 + (GAAA)n Simple_repeat Simple_repeat 1 76 0 4 1074 1099 107 6 11 chr13 64195550 64195729 -56088583 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 4 1074 987 99 6 18 chr13 64195729 64195813 -56088499 + (GAAA)n Simple_repeat Simple_repeat 4 86 0 4 1074 1351 59 35 65 chr13 64195813 64196012 -56088300 + B2_Mm1a SINE B2 1 193 0 4 1074 987 99 6 18 chr13 64196012 64196092 -56088220 + (GAAA)n Simple_repeat Simple_repeat 3 82 0 4 1074 827 149 11 22 chr13 64196059 64196238 -56088074 + GA-rich Low_complexity Low_complexity 2 178 0 4 1074 23 0 0 0 chr13 64196268 64196291 -56088021 + AT_rich Low_complexity Low_complexity 1 23 0 4 1074 229 217 83 42 chr13 64196313 64196366 -56087946 + L1M3 LINE L1 5559 5614 -569 4 1074 769 190 0 60 chr13 64196366 64196517 -56087795 + B1_Mus2 SINE Alu 1 142 -5 4 1074 229 217 83 42 chr13 64196517 64196559 -56087753 + L1M3 LINE L1 5615 5658 -525 4 1074 277 135 112 80 chr13 64196559 64196657 -56087655 - PB1D10 SINE Alu -10 110 27 4 1074 392 300 0 9 chr13 64196662 64196773 -56087539 + L1M3 LINE L1 5666 5775 -405 4 1074 1438 233 41 24 chr13 64196794 64197133 -56087179 + MTE2b LTR MaLR 18 362 -17 4 1074 284 89 36 0 chr13 64197291 64197347 -56086965 + (TCTG)n Simple_repeat Simple_repeat 3 60 0 4 1074 216 0 0 0 chr13 64197347 64197370 -56086942 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1074 480 235 163 50 chr13 64197559 64197830 -56086482 - ORR1E LTR MaLR -4 355 26 4 1074 1089 84 136 18 chr13 64197919 64198088 -56086224 + B2_Mm1t SINE B2 2 190 -3 4 1074 965 252 51 12 chr13 64198114 64198371 -56085941 - B4A SINE B4 0 292 26 4 1074 318 208 12 49 chr13 64199441 64199522 -56084790 + ID4 SINE ID 1 78 -5 4 1074 644 247 0 33 chr13 64200828 64200979 -56083333 - B1_Mur1 SINE Alu 0 149 4 4 1074 278 253 73 92 chr13 64201108 64201217 -56083095 + ID_B1 SINE B4 109 215 -9 4 1074 22 0 0 0 chr13 64201750 64201772 -56082540 + AT_rich Low_complexity Low_complexity 1 22 0 4 1074 759 296 25 82 chr13 64201784 64202064 -56082248 + B4A SINE B4 25 288 -4 4 1074 1856 150 124 13 chr13 64202191 64202563 -56081749 - MTC LTR MaLR -8 413 1 4 1074 23 0 0 0 chr13 64202595 64202618 -56081694 + AT_rich Low_complexity Low_complexity 1 23 0 4 1074 1227 232 128 3 chr13 64202716 64203053 -56081259 + MTEa LTR MaLR 1 379 0 4 1074 360 301 38 19 chr13 64203499 64203658 -56080654 + MER21B LTR ERV1 438 599 -264 4 1074 723 201 124 47 chr13 64203662 64203855 -56080457 + B4 SINE B4 19 226 -66 4 1074 644 107 0 10 chr13 64203882 64203986 -56080326 + (CA)n Simple_repeat Simple_repeat 2 104 0 4 1074 354 325 51 38 chr13 64204433 64204590 -56079722 + RSINE1 SINE B4 6 164 -1 4 1074 21 36 0 0 chr13 64204621 64204649 -56079663 + AT_rich Low_complexity Low_complexity 1 28 0 4 1074 210 131 106 21 chr13 64205081 64205128 -56079184 + ID_B1 SINE B4 87 137 -87 4 1074 282 302 0 11 chr13 64205183 64205270 -56079042 - PB1D10 SINE Alu -31 86 1 4 1074 389 312 25 50 chr13 64205279 64205481 -56078831 - MIR SINE MIR -15 247 51 4 1074 279 93 0 0 chr13 64205510 64205553 -56078759 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1074 195 42 0 0 chr13 64205553 64205576 -56078736 + (GA)n Simple_repeat Simple_repeat 2 25 0 4 1074 587 268 33 13 chr13 64205651 64205802 -56078510 + B3A SINE B2 1 154 -44 4 1074 1972 85 21 0 chr13 64206387 64206670 -56077642 + ORR1A2 LTR MaLR 1 289 -38 4 1074 531 0 0 0 chr13 64206692 64206751 -56077561 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1074 404 313 7 63 chr13 64207612 64207755 -56076557 - RSINE1 SINE B4 0 165 31 4 1074 430 195 13 0 chr13 64207853 64207930 -56076382 - ID4 SINE ID -4 79 2 4 1074 22 35 0 0 chr13 64207968 64207997 -56076315 + AT_rich Low_complexity Low_complexity 1 29 0 4 1074 279 248 0 0 chr13 64209312 64209417 -56074895 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 4 1074 265 283 70 9 chr13 64210575 64210689 -56073623 - MER34A LTR ERV1 -83 488 368 4 1074 494 309 123 8 chr13 64210721 64210956 -56073356 - MER34A LTR ERV1 -285 286 25 4 1074 733 297 8 50 chr13 64211096 64211337 -56072975 + B4A SINE B4 1 231 -61 4 1074 1449 73 10 5 chr13 64211342 64211536 -56072776 + B2_Mm2 SINE B2 1 195 0 4 1074 547 203 236 7 chr13 64211550 64211694 -56072618 + RMER1B Other Other 857 1033 -33 4 1074 270 0 0 0 chr13 64211694 64211724 -56072588 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1074 227 268 125 0 chr13 64211746 64211802 -56072510 + B4 SINE B4 218 280 -12 4 1074 486 189 0 164 chr13 64211960 64212106 -56072206 + B1_Mur4 SINE Alu 8 129 -21 4 1074 380 37 19 0 chr13 64212137 64212191 -56072121 + (CAAA)n Simple_repeat Simple_repeat 1 55 0 4 1074 429 70 0 0 chr13 64212226 64212283 -56072029 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 1074 339 209 0 0 chr13 64212298 64212365 -56071947 - tRNA-Ala-GCY_ tRNA tRNA -7 68 2 4 1074 360 294 99 35 chr13 64212501 64212642 -56071670 + RMER30 DNA MER1_type 25 174 -28 4 1074 25 0 0 0 chr13 64212932 64212957 -56071355 + AT_rich Low_complexity Low_complexity 1 25 0 4 1074 379 73 29 0 chr13 64213065 64213133 -56071179 + (TA)n Simple_repeat Simple_repeat 1 70 0 4 1074 1082 54 0 7 chr13 64213133 64213283 -56071029 - B2_Mm1t SINE B2 -44 149 1 4 1074 829 257 98 15 chr13 64213848 64214113 -56070199 + B4A SINE B4 6 292 0 4 1074 213 146 0 0 chr13 64214185 64214233 -56070079 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 4 1074 1338 103 11 0 chr13 64214381 64214565 -56069747 - B2_Mm1t SINE B2 -7 186 1 4 1074 1736 138 88 18 chr13 64214677 64215008 -56069304 + ORR1B1 LTR MaLR 1 354 -40 4 1074 265 50 0 0 chr13 64215008 64215048 -56069264 + L1_Mus2 LINE L1 6527 6566 0 4 1074 399 71 0 0 chr13 64215066 64215122 -56069190 + ORR1B1 LTR MaLR 312 367 0 4 1074 432 216 39 31 chr13 64215124 64215253 -56069059 + L1M4 LINE L1 4580 4709 -1437 4 1074 865 186 24 94 chr13 64215256 64215469 -56068843 + B3A SINE B2 1 198 0 4 1074 26 0 0 0 chr13 64215471 64215497 -56068815 + AT_rich Low_complexity Low_complexity 1 26 0 4 1074 210 265 71 12 chr13 64215514 64215598 -56068714 + RSINE1 SINE B4 15 103 -62 4 1074 848 135 19 25 chr13 64215602 64215762 -56068550 - B2_Mm2 SINE B2 -35 160 2 4 1074 282 216 0 0 chr13 64215770 64215844 -56068468 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 1074 2481 63 0 37 chr13 64215874 64216202 -56068110 - L1_Mus2 LINE L1 -1 6565 6250 4 1074 292 241 142 9 chr13 64216216 64216329 -56067983 + L1M4 LINE L1 4690 4817 -1329 4 1074 297 75 0 0 chr13 64216783 64216823 -56067489 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1074 333 68 0 0 chr13 64216823 64216867 -56067445 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 1074 2173 141 15 3 chr13 64216867 64217208 -56067104 + ORR1A1 LTR MaLR 2 346 0 4 1074 1259 20 0 0 chr13 64217215 64217354 -56066958 + B1_Mm SINE Alu 1 139 -8 4 1074 197 33 33 0 chr13 64217354 64217384 -56066928 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1074 355 215 0 91 chr13 64217476 64217586 -56066726 - B1F SINE Alu -34 115 16 4 1074 243 235 14 14 chr13 64217607 64217676 -56066636 + L1MB4 LINE L1 6100 6168 -12 4 1074 287 279 13 0 chr13 64217879 64217958 -56066354 + B4A SINE B4 169 248 -44 5 1074 854 248 179 63 chr13 64218022 64218357 -56065955 - MTE2b LTR MaLR -5 374 1 5 1074 205 269 19 0 chr13 64218361 64218413 -56065899 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1074 1466 78 0 15 chr13 64218850 64219045 -56065267 - B2_Mm1a SINE B2 0 193 2 5 1074 827 206 14 0 chr13 64219050 64219196 -56065116 - B1_Mur2 SINE Alu 0 149 2 5 1074 995 223 184 6 chr13 64219327 64219647 -56064665 + MTD LTR MaLR 43 419 0 5 1074 234 0 0 0 chr13 64220249 64220275 -56064037 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 1074 1154 95 0 0 chr13 64220352 64220499 -56063813 + B1_Mus1 SINE Alu 2 148 0 5 1074 270 292 64 64 chr13 64220547 64220719 -56063593 + RMER5 LTR ERV1 22 193 -341 5 1074 540 0 0 0 chr13 64220719 64220779 -56063533 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1074 409 336 16 0 chr13 64221092 64221217 -56063095 + MER58A DNA MER1_type 10 136 -88 5 1074 355 149 68 0 chr13 64221266 64221340 -56062972 + B3 SINE B2 38 116 -100 5 1074 242 296 12 0 chr13 64221491 64221572 -56062740 - B4A SINE B4 -209 83 2 5 1074 316 312 0 0 chr13 64221646 64221726 -56062586 + PB1D10 SINE Alu 29 108 -9 5 1074 286 245 58 58 chr13 64222327 64222431 -56061881 + MT2B LTR ERVL 154 257 -344 5 1074 607 177 88 8 chr13 64222343 64222468 -56061844 + B1_Mur4 SINE Alu 7 141 -9 5 1074 479 312 74 11 chr13 64222711 64222886 -56061426 + B3A SINE B2 11 196 -2 5 1074 593 210 8 85 chr13 64222911 64223041 -56061271 + B1_Mur1 SINE Alu 1 120 0 5 1074 469 278 133 0 chr13 64223129 64223302 -56061010 + B3A SINE B2 2 197 -1 5 1074 23 0 0 0 chr13 64223761 64223784 -56060528 + AT_rich Low_complexity Low_complexity 1 23 0 5 1074 1194 128 16 36 chr13 64223818 64224012 -56060300 + B2_Mm2 SINE B2 2 191 -4 5 1074 1355 75 6 0 chr13 64224021 64224194 -56060118 + B2_Mm1a SINE B2 2 175 -18 5 1074 1359 149 123 40 chr13 64224200 64224500 -56059812 + ORR1C1 LTR MaLR 54 378 0 5 1074 331 237 113 0 chr13 64224564 64224661 -56059651 + PB1 SINE Alu 17 124 -3 5 1074 426 204 48 0 chr13 64224658 64224761 -56059551 + B3 SINE B2 9 116 -100 5 1075 641 146 73 51 chr13 64225461 64225598 -56058714 - B1_Mus1 SINE Alu -5 145 6 5 1075 459 52 0 0 chr13 64225601 64225659 -56058653 + (TCCC)n Simple_repeat Simple_repeat 4 61 0 5 1075 786 22 0 0 chr13 64225661 64225753 -56058559 + (TTTC)n Simple_repeat Simple_repeat 4 95 0 5 1075 338 287 32 0 chr13 64225754 64225848 -56058464 - PB1D7 SINE Alu -6 114 18 5 1075 2165 204 15 157 chr13 64226086 64226768 -56057544 - MTD-int LTR MaLR -669 589 5 5 1075 1120 204 206 17 chr13 64226772 64226995 -56057317 - MTD LTR MaLR 0 419 142 5 1075 2085 123 5 67 chr13 64226995 64227429 -56056883 + RMER17C LTR ERVK 1 407 -3 5 1075 1120 204 206 17 chr13 64227429 64227554 -56056758 - MTD LTR MaLR -278 141 6 5 1075 890 185 139 16 chr13 64228311 64228498 -56055814 - B3 SINE B2 -6 210 1 5 1075 281 242 111 40 chr13 64228504 64228603 -56055709 - PB1D10 SINE Alu 0 117 12 5 1075 463 216 184 14 chr13 64228534 64228675 -56055637 - ID_B1 SINE B4 -57 167 3 5 1075 309 299 0 0 chr13 64228830 64228897 -56055415 - B3A SINE B2 -65 133 67 5 1075 672 210 8 0 chr13 64228903 64229027 -56055285 + RSINE1 SINE B4 12 136 -29 5 1075 297 0 0 0 chr13 64229831 64229864 -56054448 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1075 222 329 37 25 chr13 64230086 64230167 -56054145 + PB1D7 SINE Alu 35 116 -4 5 1075 355 241 41 0 chr13 64230214 64230315 -56053997 + PB1D7 SINE Alu 10 115 -5 5 1075 1217 34 0 7 chr13 64231800 64231946 -56052366 + B1_Mus2 SINE Alu 3 147 0 5 1075 1685 26 5 0 chr13 64231997 64232189 -56052123 + B2_Mm1t SINE B2 1 193 0 5 1075 435 254 13 124 chr13 64232789 64232942 -56051370 + RSINE1 SINE B4 29 164 -1 5 1075 1526 139 201 22 chr13 64232990 64233358 -56050954 - RMER10A LTR ERVL -6 436 3 5 1075 475 225 0 35 chr13 64233563 64233678 -56050634 + PB1D9 SINE Alu 1 111 -9 5 1075 281 269 24 60 chr13 64233731 64233814 -56050498 + ID4_ SINE ID 3 82 -1 5 1075 1305 83 0 0 chr13 64233893 64234073 -56050239 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 5 1075 1213 41 0 7 chr13 64234135 64234283 -56050029 + B1_Mm SINE Alu 1 147 0 5 1075 24 0 0 0 chr13 64234332 64234356 -56049956 + AT_rich Low_complexity Low_complexity 1 24 0 5 1075 867 202 120 0 chr13 64236911 64237094 -56047218 + B3 SINE B2 4 208 -8 5 1075 371 263 163 64 chr13 64237199 64237463 -56046849 + L1MA7 LINE L1 5539 5828 -463 5 1075 763 174 29 7 chr13 64238876 64239015 -56045297 - B1_Mur3 SINE Alu -7 142 1 5 1075 1812 94 7 14 chr13 64239296 64239588 -56044724 - RMER6A LTR ERVK -62 694 405 5 1075 878 179 14 0 chr13 64240423 64240568 -56043744 - B1_Mus1 SINE Alu 0 148 2 5 1075 1206 48 0 0 chr13 64240865 64241011 -56043301 - B1_Mus1 SINE Alu -1 147 2 5 1075 275 106 42 21 chr13 64241050 64241098 -56043214 + Lx8 LINE L1 5858 5906 -1567 5 1075 396 203 0 60 chr13 64241447 64241531 -56042781 + ID4_ SINE ID 5 83 0 5 1075 232 56 0 27 chr13 64241714 64241751 -56042561 - B1_Mm SINE Alu 0 147 112 5 1075 425 144 111 0 chr13 64241867 64241957 -56042355 + B1_Mus2 SINE Alu 48 147 0 5 1075 639 281 120 15 chr13 64242155 64242560 -56041752 + L1ME1 LINE L1 5670 6124 -55 5 1075 616 220 0 8 chr13 64242574 64242707 -56041605 + B1_Mur2 SINE Alu 18 149 0 5 1075 243 0 0 0 chr13 64243822 64243849 -56040463 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 5 1075 1277 88 60 5 chr13 64243849 64244027 -56040285 - B2_Mm2 SINE B2 -6 189 1 5 1075 248 111 22 0 chr13 64244053 64244098 -56040214 + (CATATA)n Simple_repeat Simple_repeat 5 50 0 5 1075 786 201 0 51 chr13 64244155 64244312 -56040000 + B1_Mur1 SINE Alu 1 149 0 5 1075 276 30 0 0 chr13 64244446 64244479 -56039833 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 5 1075 228 150 25 0 chr13 64244490 64244530 -56039782 + RSINE1 SINE B4 3 43 -122 5 1075 525 110 0 0 chr13 64244531 64244613 -56039699 + B1_Mus1 SINE Alu 2 83 -65 5 1075 284 224 12 84 chr13 64244541 64244624 -56039688 + MT2B LTR ERVL 175 251 -350 5 1075 230 81 27 0 chr13 64244624 64244661 -56039651 + (GAAA)n Simple_repeat Simple_repeat 3 40 0 5 1075 1164 54 0 39 chr13 64244766 64244904 -56039408 + B1_Mus1 SINE Alu 1 138 -10 5 1075 183 42 0 0 chr13 64244904 64244928 -56039384 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1075 1164 54 0 39 chr13 64244928 64244943 -56039369 + B1_Mus1 SINE Alu 139 148 0 5 1075 1491 68 16 0 chr13 64244974 64245165 -56039147 + B2_Mm2 SINE B2 1 194 -1 5 1075 251 188 42 0 chr13 64245270 64245318 -56038994 + ID4_ SINE ID 2 51 -32 5 1075 287 335 88 33 chr13 64247165 64247347 -56036965 + L1MB4 LINE L1 278 469 -6138 5 1075 1679 32 0 0 chr13 64248483 64248673 -56035639 - B2_Mm1a SINE B2 -1 192 3 5 1075 289 267 0 95 chr13 64248752 64248768 -56035544 + MT2B LTR ERVL 152 158 -443 5 1075 572 226 17 9 chr13 64248768 64248884 -56035428 + PB1D9 SINE Alu 2 118 -2 5 1075 498 214 31 16 chr13 64248904 64249032 -56035280 + B1F SINE Alu 19 148 -1 5 1075 692 161 138 0 chr13 64249407 64249537 -56034775 + B1_Mur3 SINE Alu 2 149 0 5 1075 215 183 33 0 chr13 64249537 64249597 -56034715 + A-rich Low_complexity Low_complexity 3 64 0 5 1075 790 245 83 43 chr13 64249843 64250120 -56034192 - B4A SINE B4 -4 288 1 5 1075 364 123 645 16 chr13 64250458 64250585 -56033727 + MTD LTR MaLR 213 419 0 5 1075 297 128 0 0 chr13 64250639 64250686 -56033626 + (GGA)n Simple_repeat Simple_repeat 3 49 0 5 1075 586 139 26 9 chr13 64252229 64252345 -56031967 + B1_Mus2 SINE Alu 29 146 -1 5 1075 1395 140 18 5 chr13 64252358 64252580 -56031732 + URR1B DNA MER1_type 1 225 0 5 1075 508 236 36 0 chr13 64252637 64252747 -56031565 + B3 SINE B2 1 114 -102 5 1075 299 222 123 0 chr13 64253462 64253543 -56030769 + PB1D9 SINE Alu 1 91 -29 5 1075 28 29 0 0 chr13 64253862 64253897 -56030415 + GC_rich Low_complexity Low_complexity 1 35 0 5 1075 21 0 0 0 chr13 64254044 64254065 -56030247 + GC_rich Low_complexity Low_complexity 1 21 0 5 1075 1156 75 7 0 chr13 64255098 64255245 -56029067 - B1_Mus1 SINE Alu 0 148 1 5 1075 518 149 36 146 chr13 64255245 64255409 -56028903 - B1_Mur2 SINE Alu -2 147 1 5 1075 198 71 0 0 chr13 64256026 64256054 -56028258 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1075 613 244 106 0 chr13 64256057 64256237 -56028075 + B3 SINE B2 4 202 -14 5 1075 370 204 60 34 chr13 64256925 64257042 -56027270 + PB1D9 SINE Alu 1 120 0 5 1075 215 217 110 55 chr13 64257095 64257168 -56027144 + ID2 SINE ID 6 82 -1 5 1075 1430 51 34 6 chr13 64257361 64257540 -56026772 + B2_Mm2 SINE B2 2 185 -10 5 1075 716 281 48 0 chr13 64257606 64257773 -56026539 + B3A SINE B2 2 176 -22 5 1075 302 319 69 0 chr13 64257813 64257957 -56026355 + MER110A LTR ERV1 263 416 -52 5 1075 976 241 124 74 chr13 64258340 64258673 -56025639 + MTD LTR MaLR 1 373 -46 5 1075 1224 48 7 0 chr13 64258673 64258819 -56025493 - B1_Mm SINE Alu 0 147 1 5 1075 976 241 124 74 chr13 64258819 64258879 -56025433 + MTD LTR MaLR 374 414 -5 5 1075 944 149 208 0 chr13 64258948 64259116 -56025196 - B3 SINE B2 -13 203 1 6 1075 787 123 8 0 chr13 64259186 64259308 -56025004 + ORR1C1 LTR MaLR 256 378 0 6 1075 917 230 15 10 chr13 64259530 64259736 -56024576 + B3 SINE B2 1 207 -9 6 1075 372 260 32 8 chr13 64259788 64259912 -56024400 - L1MB7 LINE L1 -195 5989 5863 6 1075 317 43 0 21 chr13 64259967 64260015 -56024297 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 6 1075 509 256 16 8 chr13 64260019 64260141 -56024171 + B3A SINE B2 54 176 -22 6 1075 358 270 216 4 chr13 64260844 64261108 -56023204 - L1MB7 LINE L1 -748 5398 5079 6 1075 511 256 151 36 chr13 64261116 64261238 -56023074 + L1MC3 LINE L1 6721 6854 -931 6 1075 318 26 0 0 chr13 64261238 64261277 -56023035 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1075 511 256 151 36 chr13 64261277 64261458 -56022854 + L1MC3 LINE L1 6855 7059 -726 6 1075 237 319 152 46 chr13 64261482 64261745 -56022567 + ORR1D2 LTR MaLR 45 335 -35 6 1075 460 321 63 22 chr13 64261869 64262092 -56022220 - L1MB5 LINE L1 -288 5886 5655 6 1075 207 205 0 0 chr13 64262446 64262485 -56021827 + (CATATA)n Simple_repeat Simple_repeat 6 44 0 6 1075 215 231 14 97 chr13 64262545 64262617 -56021695 + RSINE1 SINE B4 13 78 -87 6 1075 264 122 0 0 chr13 64263180 64263221 -56021091 + (CGG)n Simple_repeat Simple_repeat 3 43 0 6 1075 22 35 0 0 chr13 64263472 64263501 -56020811 + GC_rich Low_complexity Low_complexity 1 29 0 6 1075 24 53 0 0 chr13 64265088 64265126 -56019186 + AT_rich Low_complexity Low_complexity 1 38 0 6 1075 198 0 0 0 chr13 64265200 64265222 -56019090 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1075 444 232 116 0 chr13 64265222 64265334 -56018978 - B1_Mur4 SINE Alu -11 139 15 6 1075 21 36 0 0 chr13 64265356 64265384 -56018928 + AT_rich Low_complexity Low_complexity 1 28 0 6 1075 335 251 32 16 chr13 64265568 64265746 -56018566 + B4A SINE B4 1 287 -5 6 1075 591 85 0 0 chr13 64265783 64265865 -56018447 + (TTTC)n Simple_repeat Simple_repeat 1 82 0 6 1075 805 198 118 15 chr13 64266854 64267049 -56017263 - B3 SINE B2 -1 215 1 6 1075 1278 27 0 0 chr13 64267059 64267206 -56017106 - B1_Mm SINE Alu 0 147 1 6 1075 2440 39 111 27 chr13 64267256 64267624 -56016688 - MTB_Mm LTR MaLR -8 399 1 6 1075 201 121 0 0 chr13 64267636 64267669 -56016643 + (TATG)n Simple_repeat Simple_repeat 2 34 0 6 1075 289 189 0 0 chr13 64267699 64267752 -56016560 - B3 SINE B2 -162 54 2 6 1075 1072 276 122 17 chr13 64267923 64268406 -56015906 - Lx9 LINE L1 -14 7630 7097 6 1075 440 225 0 6 chr13 64268430 64268494 -56015818 + polypurine Low_complexity Low_complexity 1 64 0 6 1075 369 0 0 0 chr13 64268494 64268535 -56015777 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1075 440 225 0 6 chr13 64268535 64268635 -56015677 + GA-rich Low_complexity Low_complexity 65 164 0 6 1075 357 62 0 0 chr13 64268635 64268683 -56015629 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1075 440 225 0 6 chr13 64268683 64268696 -56015616 + polypurine Low_complexity Low_complexity 165 177 0 6 1075 329 292 98 74 chr13 64268712 64268755 -56015557 - B4A SINE B4 -42 250 202 6 1075 488 204 120 60 chr13 64268755 64268938 -56015374 - B2_Mm2 SINE B2 0 195 2 6 1075 329 292 98 74 chr13 64268938 64269138 -56015174 - B4A SINE B4 -91 201 2 6 1075 219 91 321 18 chr13 64269271 64269327 -56014985 + B1_Mur2 SINE Alu 70 142 -7 6 1075 194 0 39 0 chr13 64269548 64269574 -56014738 + (TA)n Simple_repeat Simple_repeat 1 27 0 6 1075 808 167 20 27 chr13 64269795 64269943 -56014369 + B1_Mus1 SINE Alu 2 148 0 6 1075 1918 134 132 16 chr13 64270047 64270412 -56013900 - MTB_Mm LTR MaLR 0 407 1 6 1075 369 222 9 69 chr13 64270667 64270783 -56013529 - PB1D9 SINE Alu 0 120 12 6 1075 220 250 58 0 chr13 64270978 64271030 -56013282 + PB1D10 SINE Alu 46 100 -17 6 1075 290 250 11 0 chr13 64271198 64271290 -56013022 + (CTG)n Simple_repeat Simple_repeat 1 93 0 6 1075 270 226 0 0 chr13 64271689 64271742 -56012570 + ID4 SINE ID 2 54 -29 6 1075 1129 181 58 5 chr13 64271784 64271989 -56012323 - B3 SINE B2 0 216 1 6 1075 1237 41 0 0 chr13 64272046 64272191 -56012121 + B1_Mm SINE Alu 2 146 -1 6 1075 325 80 20 0 chr13 64272430 64272480 -56011832 - ORR1D1 LTR MaLR 0 384 334 6 1075 336 143 0 0 chr13 64272491 64272547 -56011765 + (TCC)n Simple_repeat Simple_repeat 3 58 0 6 1075 611 239 29 35 chr13 64272561 64272734 -56011578 - ORR1D1 LTR MaLR -60 314 143 6 1075 1072 195 39 5 chr13 64272785 64272991 -56011321 - RMER13B LTR ERVK -101 807 595 6 1075 2407 129 23 2 chr13 64272989 64273386 -56010926 - RMER13B LTR ERVK -503 405 1 6 1075 538 135 59 131 chr13 64273387 64273540 -56010772 - ORR1D1 LTR MaLR -227 147 6 6 1075 243 0 0 0 chr13 64273994 64274021 -56010291 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1075 726 172 52 7 chr13 64274021 64274156 -56010156 - B1_Mur4 SINE Alu -9 141 1 6 1075 785 206 10 96 chr13 64274525 64274734 -56009578 + B3A SINE B2 3 193 -5 6 1075 202 261 150 23 chr13 64275054 64275187 -56009125 + MIR SINE MIR 81 230 -32 6 1075 203 266 62 15 chr13 64275144 64275209 -56009103 + L2a LINE L2 3347 3414 -12 6 1075 250 24 47 23 chr13 64275263 64275306 -56009006 + (TTTTTG)n Simple_repeat Simple_repeat 3 46 0 6 1075 337 194 0 29 chr13 64275657 64275827 -56008485 + (TG)n Simple_repeat Simple_repeat 2 166 0 6 1075 201 111 0 0 chr13 64275828 64275855 -56008457 + (TGGG)n Simple_repeat Simple_repeat 4 30 0 6 1075 643 226 82 133 chr13 64275861 64276019 -56008293 - B3A SINE B2 -47 151 1 6 1075 207 0 0 0 chr13 64276469 64276492 -56007820 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 6 1075 477 267 83 0 chr13 64276494 64276614 -56007698 - B1F2 SINE Alu -18 131 2 6 1075 225 237 34 0 chr13 64276724 64276783 -56007529 - PB1D10 SINE Alu -6 111 51 6 1075 475 209 13 126 chr13 64276825 64276984 -56007328 + B1_Mur1 SINE Alu 2 142 -7 6 1075 201 121 0 0 chr13 64277452 64277485 -56006827 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1075 662 102 0 63 chr13 64277601 64277727 -56006585 - Lx3A LINE L1 -3 6978 6861 6 1075 473 268 181 12 chr13 64277727 64277893 -56006419 - B4A SINE B4 -42 250 57 6 1075 723 196 7 15 chr13 64277917 64278052 -56006260 - B1_Mus2 SINE Alu -13 134 1 6 1075 1221 35 0 0 chr13 64278066 64278208 -56006104 - B1_Mus2 SINE Alu -5 142 1 6 1075 316 290 22 9 chr13 64278490 64278585 -56005727 - B4A SINE B4 -76 216 127 6 1075 693 214 31 31 chr13 64278722 64278881 -56005431 - RSINE1 SINE B4 -6 159 1 6 1075 1291 94 10 30 chr13 64278895 64279092 -56005220 - B2_Mm2 SINE B2 -2 193 1 6 1075 430 250 229 28 chr13 64281002 64281279 -56003033 - L1MC3 LINE L1 -1840 5945 5607 6 1075 976 169 197 0 chr13 64281302 64281480 -56002832 - B3 SINE B2 -3 213 1 6 1075 601 221 0 119 chr13 64281493 64281652 -56002660 - B1_Mur3 SINE Alu -9 140 1 6 1075 240 183 66 16 chr13 64281679 64281740 -56002572 + CT-rich Low_complexity Low_complexity 2 65 0 6 1075 948 116 24 24 chr13 64281740 64281908 -56002404 - B2_Mm2 SINE B2 -27 168 1 6 1075 869 256 5 33 chr13 64282078 64282288 -56002024 - B3 SINE B2 -12 204 1 6 1075 973 131 222 0 chr13 64282649 64282825 -56001487 + B3 SINE B2 2 216 0 6 1075 740 263 91 5 chr13 64284356 64284555 -55999757 - B4A SINE B4 -56 236 21 6 1075 877 185 0 14 chr13 64285464 64285612 -55998700 - B1_Mus2 SINE Alu 0 147 2 6 1075 223 205 0 0 chr13 64286459 64286498 -55997814 + B3 SINE B2 92 130 -86 6 1075 611 100 21 0 chr13 64286895 64287004 -55997308 + B1_Mus2 SINE Alu 2 120 0 6 1075 1009 114 44 0 chr13 64288914 64289072 -55995240 + B2_Mm1t SINE B2 1 165 -28 6 1075 289 164 0 35 chr13 64289132 64289189 -55995123 + B2_Mm2 SINE B2 47 101 -94 6 1075 890 26 0 0 chr13 64289584 64289698 -55994614 + B1_Mus2 SINE Alu 29 142 -5 6 1075 1229 48 0 0 chr13 64292316 64292462 -55991850 - B1_Mm SINE Alu -1 146 1 6 1075 267 31 0 0 chr13 64292632 64292664 -55991648 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1075 357 24 0 0 chr13 64292746 64292788 -55991524 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1075 394 291 25 63 chr13 64292921 64293079 -55991233 - RSINE1 SINE B4 -9 156 5 6 1075 748 288 60 18 chr13 64293448 64293780 -55990532 + MLT1B LTR MaLR 41 386 -4 6 1075 27 49 0 0 chr13 64294060 64294101 -55990211 + AT_rich Low_complexity Low_complexity 1 41 0 6 1075 207 0 0 0 chr13 64294426 64294449 -55989863 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1075 585 133 0 20 chr13 64294452 64294552 -55989760 - B1_Mur4 SINE Alu -1 149 52 6 1075 3050 56 48 0 chr13 64295050 64295428 -55988884 + MTA_Mm LTR MaLR 1 396 0 6 1075 189 0 0 0 chr13 64296644 64296665 -55987647 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1075 545 145 9 52 chr13 64296944 64297060 -55987252 - PB1D9 SINE Alu -1 119 9 6 1075 416 176 231 19 chr13 64300666 64300770 -55983542 - B1_Mur1 SINE Alu -3 146 21 6 1075 1182 55 0 0 chr13 64300997 64301143 -55983169 - B1_Mm SINE Alu 0 147 2 6 1075 233 315 14 0 chr13 64301267 64301340 -55982972 + ID2 SINE ID 2 75 -8 6 1075 455 204 87 10 chr13 64301947 64302051 -55982261 + PB1D9 SINE Alu 9 120 0 6 1075 306 0 0 0 chr13 64304328 64304362 -55979950 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1075 1091 261 13 108 chr13 64307238 64307628 -55976684 + ORR1D2 LTR MaLR 18 370 0 6 1075 382 235 0 0 chr13 64307684 64307765 -55976547 - ID_B1 SINE B4 -31 193 113 6 1075 678 148 0 0 chr13 64308191 64308306 -55976006 + (GA)n Simple_repeat Simple_repeat 1 115 0 6 1075 415 304 40 8 chr13 64308306 64308432 -55975880 - B3A SINE B2 -65 133 4 7 1075 501 126 51 51 chr13 64308445 64308586 -55975726 - B3 SINE B2 -9 186 48 7 1075 1058 140 62 0 chr13 64308635 64308813 -55975499 - B2_Mm2 SINE B2 -6 189 1 7 1075 1240 48 0 0 chr13 64308912 64309059 -55975253 + B1_Mus2 SINE Alu 1 147 0 7 1075 249 33 0 0 chr13 64309059 64309089 -55975223 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1075 24 32 0 0 chr13 64309966 64309997 -55974315 + AT_rich Low_complexity Low_complexity 1 31 0 7 1075 201 100 24 24 chr13 64310523 64310564 -55973748 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 7 1075 537 16 0 0 chr13 64310617 64310679 -55973633 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1075 22 0 0 0 chr13 64312084 64312106 -55972206 + AT_rich Low_complexity Low_complexity 1 22 0 7 1075 180 241 0 108 chr13 64312171 64312236 -55972076 + MER5B DNA MER1_type 120 177 -1 7 1075 540 268 94 42 chr13 64312270 64312461 -55971851 + B3 SINE B2 2 202 -14 7 1075 457 309 32 26 chr13 64312815 64313111 -55971201 + RLTR15 LTR ERVK 48 329 -30 7 1075 554 295 61 27 chr13 64313178 64313439 -55970873 - B4A SINE B4 -21 271 2 7 1075 359 310 60 27 chr13 64313507 64313656 -55970656 + MLT2B4 LTR ERVL 85 238 -318 7 1075 376 277 37 25 chr13 64313834 64313997 -55970315 - L1M4c LINE L1 -2150 4226 4062 7 1075 484 287 155 0 chr13 64314059 64314240 -55970072 - ID_B1 SINE B4 -15 209 1 7 1075 293 247 113 0 chr13 64314281 64314378 -55969934 - L1M4c LINE L1 -2469 3910 3803 7 1075 513 283 84 38 chr13 64314606 64314819 -55969493 - B4A SINE B4 -62 230 8 7 1075 325 242 211 35 chr13 64314992 64315219 -55969093 - L1M4c LINE L1 -4520 1864 1598 7 1075 936 282 133 31 chr13 64315238 64315892 -55968420 - L1M4c LINE L1 -4888 1496 776 7 1075 587 240 144 10 chr13 64316240 64316434 -55967878 + ID_B1 SINE B4 1 220 -4 7 1075 391 294 0 35 chr13 64316515 64316628 -55967684 + RSINE1 SINE B4 9 117 -48 7 1075 207 0 0 0 chr13 64316635 64316658 -55967654 + (TC)n Simple_repeat Simple_repeat 2 24 0 7 1075 265 349 65 20 chr13 64317260 64317459 -55966853 - 7SLRNA srpRNA srpRNA -106 208 1 7 1075 359 246 38 96 chr13 64317937 64318094 -55966218 - B1F2 SINE Alu 0 149 2 7 1075 594 239 119 68 chr13 64318252 64318530 -55965782 - B4A SINE B4 0 292 1 7 1075 207 0 0 0 chr13 64318547 64318570 -55965742 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1075 1177 81 0 0 chr13 64318735 64318883 -55965429 + B1_Mus1 SINE Alu 1 148 0 7 1075 366 23 0 0 chr13 64319249 64319292 -55965020 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1075 461 315 123 14 chr13 64319297 64319516 -55964796 - B4A SINE B4 0 292 50 7 1075 216 24 73 0 chr13 64319521 64319562 -55964750 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 7 1075 1625 26 5 10 chr13 64319580 64319773 -55964539 - B2_Mm1t SINE B2 0 193 2 7 1075 1208 41 7 0 chr13 64319791 64319937 -55964375 - B1_Mus2 SINE Alu 0 147 1 7 1075 666 225 58 0 chr13 64320060 64320198 -55964114 - B1_Mur1 SINE Alu -3 146 1 7 1075 289 298 20 50 chr13 64320936 64321035 -55963277 + RSINE1 SINE B4 30 125 -40 7 1075 192 40 0 0 chr13 64321056 64321081 -55963231 + (TCTCTG)n Simple_repeat Simple_repeat 2 26 0 7 1075 195 42 0 0 chr13 64321081 64321105 -55963207 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 1075 358 182 25 25 chr13 64321735 64321814 -55962498 - ID4 SINE ID -2 81 3 7 1075 533 325 16 48 chr13 64322628 64322880 -55961432 - B4A SINE B4 -37 255 12 7 1075 394 301 62 27 chr13 64322881 64323106 -55961206 + L1ME3 LINE L1 5899 6131 -31 7 1075 27 0 0 0 chr13 64323286 64323313 -55960999 + AT_rich Low_complexity Low_complexity 1 27 0 7 1075 541 246 103 0 chr13 64323683 64323809 -55960503 + B1_Mur2 SINE Alu 3 141 -8 7 1075 369 0 0 0 chr13 64323833 64323874 -55960438 + (GGGGA)n Simple_repeat Simple_repeat 3 43 0 7 1075 789 11 0 0 chr13 64323875 64323965 -55960347 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 7 1075 3134 167 123 57 chr13 64323991 64324785 -55959527 + RLTR25B LTR ERVK 1 847 -181 7 1075 1175 116 0 0 chr13 64324805 64324977 -55959335 + B2_Mm2 SINE B2 1 172 -23 7 1075 695 206 47 134 chr13 64325231 64325529 -55958783 + RLTR25B LTR ERVK 757 1028 0 7 1075 570 199 76 8 chr13 64325529 64325658 -55958654 + B1_Mur2 SINE Alu 12 149 0 7 1075 275 0 29 0 chr13 64326639 64326674 -55957638 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1075 373 290 0 202 chr13 64327319 64327417 -55956895 - RSINE1 SINE B4 -26 139 60 7 1075 1166 94 37 37 chr13 64327417 64327431 -55956881 - B2_Mm2 SINE B2 -8 187 178 7 1075 261 0 0 0 chr13 64327431 64327460 -55956852 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 7 1075 1166 94 37 37 chr13 64327460 64327632 -55956680 - B2_Mm2 SINE B2 -18 177 1 7 1075 373 290 0 202 chr13 64327632 64327706 -55956606 - RSINE1 SINE B4 -106 59 2 7 1075 477 243 139 0 chr13 64327723 64327867 -55956445 - B3 SINE B2 -1 215 52 7 1075 452 176 0 97 chr13 64328081 64328194 -55956118 - B1_Mur1 SINE Alu 0 149 48 7 1075 200 59 29 0 chr13 64328619 64328653 -55955659 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1075 225 0 0 0 chr13 64328662 64328687 -55955625 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 7 1075 648 156 82 0 chr13 64328688 64328810 -55955502 - B1_Mus2 SINE Alu -7 140 9 7 1075 377 303 56 14 chr13 64328810 64328832 -55955480 - B4 SINE B4 -73 219 70 7 1075 1554 124 145 9 chr13 64328986 64329304 -55955008 + RLTR19 LTR ERVK 1 361 -138 7 1075 553 133 93 19 chr13 64329335 64329442 -55954870 + B1_Mm SINE Alu 31 145 -2 7 1075 494 332 56 15 chr13 64329469 64329684 -55954628 + B4A SINE B4 1 218 -74 7 1075 648 0 0 0 chr13 64329684 64329756 -55954556 + (GA)n Simple_repeat Simple_repeat 2 73 0 7 1075 494 332 56 15 chr13 64329756 64329809 -55954503 + B4A SINE B4 219 279 -13 7 1075 726 269 186 16 chr13 64330018 64330335 -55953977 + MTEb LTR MaLR 1 371 -8 7 1075 310 192 176 14 chr13 64330438 64330512 -55953800 - B1_Mur4 SINE Alu -34 86 1 7 1075 185 65 32 0 chr13 64330537 64330568 -55953744 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 7 1075 626 25 0 0 chr13 64330568 64330647 -55953665 - B1_Mm SINE Alu -11 136 58 7 1075 399 252 44 18 chr13 64330837 64330950 -55953362 + B2_Mm2 SINE B2 68 183 -12 7 1075 225 0 0 0 chr13 64330950 64330975 -55953337 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 7 1075 1172 66 132 0 chr13 64330983 64331150 -55953162 + B2_Mm2 SINE B2 2 190 -5 7 1075 726 263 104 104 chr13 64331214 64331579 -55952733 + MTE2a LTR MaLR 1 365 -14 7 1075 207 88 0 0 chr13 64332035 64332069 -55952243 + (A)n Simple_repeat Simple_repeat 1 34 0 7 1075 26 0 0 0 chr13 64332327 64332353 -55951959 + AT_rich Low_complexity Low_complexity 1 26 0 7 1075 972 58 44 0 chr13 64332449 64332586 -55951726 + B1_Mus1 SINE Alu 6 148 0 7 1075 216 0 0 0 chr13 64333148 64333172 -55951140 + (ACTG)n Simple_repeat Simple_repeat 4 27 0 7 1075 225 65 0 0 chr13 64333252 64333283 -55951029 + (ACTG)n Simple_repeat Simple_repeat 4 34 0 7 1075 561 224 65 85 chr13 64334049 64334249 -55950063 + B3 SINE B2 3 198 -18 7 1075 613 192 40 0 chr13 64334256 64334381 -55949931 - B1_Mus1 SINE Alu -1 147 18 7 1075 251 122 122 0 chr13 64334820 64334869 -55949443 + B3A SINE B2 2 56 -142 7 1075 786 178 39 22 chr13 64334903 64335081 -55949231 - B2_Mm2 SINE B2 -11 184 4 7 1075 645 223 14 0 chr13 64335101 64335234 -55949078 + B3 SINE B2 66 200 -16 7 1075 216 0 0 0 chr13 64335234 64335258 -55949054 + (TTAA)n Simple_repeat Simple_repeat 2 25 0 7 1075 400 267 0 0 chr13 64335538 64335628 -55948684 + ID_B1 SINE B4 4 93 -131 7 1075 341 290 112 0 chr13 64335912 64336019 -55948293 + RSINE1 SINE B4 9 127 -38 7 1075 417 39 0 0 chr13 64336133 64336184 -55948128 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 1075 180 125 0 0 chr13 64336213 64336245 -55948067 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 7 1075 230 250 73 0 chr13 64336245 64336313 -55947999 + PB1 SINE Alu 24 96 -31 7 1075 515 204 258 42 chr13 64337078 64337318 -55946994 - B4 SINE B4 0 292 1 7 1075 326 336 0 17 chr13 64337350 64337468 -55946844 + PB1D10 SINE Alu 2 117 0 7 1075 498 223 152 32 chr13 64337597 64337722 -55946590 + B1_Mur3 SINE Alu 1 140 -9 7 1075 201 182 0 0 chr13 64337731 64337764 -55946548 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 7 1075 215 31 31 0 chr13 64337842 64337874 -55946438 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 7 1075 637 234 0 54 chr13 64337977 64338126 -55946186 - B1_Mur1 SINE Alu -6 143 3 7 1075 494 238 274 17 chr13 64338173 64338348 -55945964 - ID_B1 SINE B4 -1 223 4 7 1075 388 259 110 20 chr13 64339511 64339657 -55944655 + RSINE1 SINE B4 7 165 0 7 1075 261 245 0 0 chr13 64339681 64339730 -55944582 + ID4 SINE ID 11 59 -24 7 1075 198 0 0 0 chr13 64339738 64339760 -55944552 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 7 1075 644 199 71 18 chr13 64339769 64339946 -55944366 + B3A SINE B2 5 205 -11 7 1075 720 171 49 21 chr13 64340092 64340235 -55944077 - B1_Mus1 SINE Alu 0 148 2 7 1075 493 73 0 0 chr13 64340359 64340427 -55943885 + L1Md_F2 LINE L1 6503 6570 -12 7 1075 283 281 22 0 chr13 64340491 64340580 -55943732 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 7 1075 257 319 43 21 chr13 64340599 64340692 -55943620 - B4A SINE B4 -14 278 184 7 1075 540 261 39 35 chr13 64340752 64340982 -55943330 + RLTR15 LTR ERVK 1 231 -128 7 1075 1400 85 5 11 chr13 64341064 64341254 -55943058 + B2_Mm2 SINE B2 1 189 -6 7 1075 1610 174 115 32 chr13 64341873 64342246 -55942066 - MTB_Mm LTR MaLR -3 404 1 8 1075 210 273 44 29 chr13 64342482 64342550 -55941762 + ID4_ SINE ID 2 70 -13 8 1075 732 200 7 27 chr13 64342576 64342725 -55941587 + B1_Mm SINE Alu 1 146 -1 8 1075 673 255 7 26 chr13 64343201 64343354 -55940958 + RSINE1 SINE B4 5 154 -11 8 1075 231 176 0 0 chr13 64343382 64343429 -55940883 + B1F1 SINE Alu 59 134 -15 8 1075 570 256 60 42 chr13 64343433 64343600 -55940712 - B3A SINE B2 0 198 29 8 1075 406 261 0 43 chr13 64344009 64344101 -55940211 - RSINE1 SINE B4 -11 154 67 8 1075 246 278 0 0 chr13 64344416 64344470 -55939842 + RSINE1 SINE B4 6 59 -106 8 1075 465 19 0 0 chr13 64344493 64344547 -55939765 + (CA)n Simple_repeat Simple_repeat 1 54 0 8 1075 342 0 0 0 chr13 64344547 64344584 -55939728 + (GA)n Simple_repeat Simple_repeat 2 39 0 8 1075 504 181 21 3 chr13 64345529 64345635 -55938677 - B1_Mur2 SINE Alu -3 146 42 8 1075 344 208 76 103 chr13 64345605 64345750 -55938562 + B3 SINE B2 66 206 -10 8 1075 289 39 11 0 chr13 64345774 64345820 -55938492 + B1_Mur4 SINE Alu 100 150 0 8 1075 285 235 59 0 chr13 64345902 64345987 -55938325 + L1ME3A LINE L1 6084 6173 0 8 1075 426 288 147 18 chr13 64347237 64347400 -55936912 - B3 SINE B2 -24 192 9 8 1075 303 239 14 0 chr13 64347654 64347725 -55936587 - PB1D10 SINE Alu 0 117 46 8 1075 324 0 0 0 chr13 64348179 64348215 -55936097 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 1075 247 229 78 102 chr13 64350526 64350653 -55933659 + B4 SINE B4 11 153 -12 8 1075 648 0 0 0 chr13 64351066 64351138 -55933174 + (TC)n Simple_repeat Simple_repeat 2 73 0 8 1075 802 61 0 17 chr13 64351199 64351316 -55932996 - B1_Mus1 SINE Alu -29 119 5 8 1075 345 302 8 8 chr13 64351472 64351589 -55932723 - RSINE1 SINE B4 -31 134 18 8 1075 210 167 0 53 chr13 64351929 64351986 -55932326 + T-rich Low_complexity Low_complexity 2 55 0 8 1075 669 190 42 7 chr13 64351987 64352130 -55932182 - B1_Mur2 SINE Alu 0 149 2 8 1075 548 273 30 8 chr13 64352172 64352305 -55932007 + RSINE1 SINE B4 1 136 -29 8 1075 1172 76 0 0 chr13 64352329 64352473 -55931839 - B1_Mm SINE Alu 0 147 4 8 1075 769 241 41 28 chr13 64353088 64353306 -55931006 + ID_B1 SINE B4 4 224 0 8 1075 841 135 139 12 chr13 64353397 64353569 -55930743 + MTD LTR MaLR 214 407 -12 8 1075 314 255 39 39 chr13 64353571 64353673 -55930639 + B1_Mus1 SINE Alu 7 108 -40 8 1075 373 116 0 42 chr13 64354058 64354130 -55930182 + B1_Mur3 SINE Alu 81 149 0 8 1075 401 234 171 34 chr13 64354149 64354295 -55930017 - RCHARR1 DNA MER1_type -256 718 553 8 1075 275 242 140 21 chr13 64354371 64354464 -55929848 - RCHARR1 DNA MER1_type -868 106 3 8 1075 340 243 118 26 chr13 64354681 64354833 -55929479 + L1M5 LINE L1 5319 5484 -680 8 1075 473 0 18 0 chr13 64355234 64355291 -55929021 + (CA)n Simple_repeat Simple_repeat 1 58 0 8 1075 759 238 155 108 chr13 64355411 64355500 -55928812 + MTD LTR MaLR 41 129 -290 8 1075 1222 41 0 0 chr13 64355500 64355647 -55928665 + B1_Mus2 SINE Alu 1 147 0 8 1075 759 238 155 108 chr13 64355647 64355919 -55928393 + MTD LTR MaLR 130 419 0 8 1075 311 226 278 0 chr13 64356117 64356250 -55928062 + L1M5 LINE L1 5572 5741 -423 8 1076 781 224 15 50 chr13 64356596 64356798 -55927514 + B3A SINE B2 1 195 -3 8 1076 1091 93 0 0 chr13 64356958 64357098 -55927214 + B1_Mus2 SINE Alu 2 141 -6 8 1076 268 148 16 16 chr13 64357098 64357160 -55927152 + GA-rich Low_complexity Low_complexity 1 62 0 8 1076 514 254 63 7 chr13 64357195 64357338 -55926974 + ID_B1 SINE B4 58 208 -16 8 1076 629 147 104 37 chr13 64357388 64357522 -55926790 + B1_Mur2 SINE Alu 2 144 -5 8 1076 1501 114 69 162 chr13 64358158 64358565 -55925747 - ORR1B1 LTR MaLR -8 386 18 8 1076 671 217 0 23 chr13 64358959 64359091 -55925221 - B1_Mur1 SINE Alu -20 129 1 8 1076 195 42 0 0 chr13 64360045 64360069 -55924243 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1076 653 135 36 9 chr13 64360092 64360204 -55924108 + PB1D9 SINE Alu 5 119 -1 8 1076 420 189 27 0 chr13 64360408 64360482 -55923830 - ID4 SINE ID -6 77 2 8 1076 1271 40 0 0 chr13 64360900 64361048 -55923264 + B1_Mus1 SINE Alu 1 148 0 8 1076 779 137 51 56 chr13 64361607 64361785 -55922527 - MTC-int LTR MaLR -836 422 246 8 1076 369 167 0 14 chr13 64361829 64361902 -55922410 + RMER15 LTR ERVL 1 72 -503 8 1076 418 169 183 20 chr13 64361903 64362019 -55922293 + B1_Mur3 SINE Alu 11 144 -5 8 1076 639 199 106 35 chr13 64362023 64362221 -55922091 + RMER15 LTR ERVL 71 282 -293 8 1076 1190 49 0 0 chr13 64362235 64362379 -55921933 + B1_Mm SINE Alu 4 147 0 8 1076 650 185 30 65 chr13 64362402 64362570 -55921742 + RMER15 LTR ERVL 246 407 -168 8 1076 978 46 0 0 chr13 64362640 64362770 -55921542 + B1_Mm SINE Alu 18 147 0 8 1076 427 242 47 31 chr13 64362865 64362993 -55921319 + ID_B1 SINE B4 88 217 -7 8 1076 253 236 41 14 chr13 64363066 64363139 -55921173 + RSINE1 SINE B4 37 111 -54 8 1076 639 194 70 28 chr13 64363171 64363314 -55920998 + B1_Mur1 SINE Alu 1 149 0 8 1076 260 53 0 26 chr13 64363330 64363369 -55920943 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 8 1076 645 256 132 52 chr13 64363933 64364259 -55920053 - MTD LTR MaLR -41 378 27 8 1076 218 32 0 31 chr13 64364290 64364322 -55919990 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 8 1076 504 254 101 6 chr13 64365125 64365303 -55919009 + B3 SINE B2 5 199 -17 8 1076 216 275 28 42 chr13 64365413 64365485 -55918827 + ID4 SINE ID 3 73 -10 8 1076 353 293 20 0 chr13 64366167 64366266 -55918046 + RSINE1 SINE B4 3 103 -62 8 1076 1067 101 0 25 chr13 64366529 64366691 -55917621 + B2_Mm2 SINE B2 1 158 -37 8 1076 207 0 0 0 chr13 64366692 64366715 -55917597 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 8 1076 663 158 197 0 chr13 64366886 64367038 -55917274 + B3 SINE B2 25 206 -10 8 1076 236 84 66 66 chr13 64367046 64367084 -55917228 + A-rich Low_complexity Low_complexity 2 40 0 8 1076 1076 96 14 14 chr13 64367084 64367232 -55917080 + B1_Mus1 SINE Alu 1 148 0 8 1076 236 84 66 66 chr13 64367232 64367269 -55917043 + A-rich Low_complexity Low_complexity 41 77 0 8 1076 1413 171 222 35 chr13 64367629 64367999 -55916313 + BGLII_B LTR ERVK 2 440 -1 8 1076 627 227 0 43 chr13 64368002 64368140 -55916172 + B1_Mur1 SINE Alu 17 148 -1 8 1076 593 276 0 7 chr13 64369551 64369686 -55914626 + RSINE1 SINE B4 4 137 -28 8 1076 198 91 0 0 chr13 64369695 64369728 -55914584 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1076 477 0 0 0 chr13 64369728 64369780 -55914532 + (GA)n Simple_repeat Simple_repeat 2 54 0 8 1076 207 171 0 0 chr13 64370354 64370395 -55913917 + L2a LINE L2 3386 3426 0 8 1076 752 205 102 29 chr13 64370648 64370854 -55913458 + ID_B1 SINE B4 1 221 -3 8 1076 1155 74 0 0 chr13 64371031 64371179 -55913133 + B1_Mus1 SINE Alu 1 148 0 8 1076 557 64 13 0 chr13 64371179 64371257 -55913055 + (GA)n Simple_repeat Simple_repeat 2 80 0 8 1076 262 174 0 55 chr13 64371247 64371338 -55912974 + A-rich Low_complexity Low_complexity 5 90 0 8 1076 489 52 515 0 chr13 64371901 64371998 -55912314 + B1_Mus1 SINE Alu 2 148 0 8 1076 204 48 71 0 chr13 64372000 64372042 -55912270 + (CAAA)n Simple_repeat Simple_repeat 4 48 0 8 1076 756 97 73 0 chr13 64372064 64372188 -55912124 + B1_Mur4 SINE Alu 11 143 -7 8 1076 428 313 101 13 chr13 64372233 64372382 -55911930 + ID_B1 SINE B4 29 190 -34 8 1076 355 357 40 0 chr13 64372885 64373011 -55911301 + RSINE1 SINE B4 13 143 -22 8 1076 419 176 32 42 chr13 64373046 64373141 -55911171 + B1_Mur1 SINE Alu 49 142 -7 8 1076 453 252 61 0 chr13 64373307 64373422 -55910890 + B1F SINE Alu 13 134 -15 8 1076 227 275 109 11 chr13 64373467 64373559 -55910753 + B3 SINE B2 109 209 -7 8 1076 1620 0 0 4 chr13 64373664 64373891 -55910421 + (TTTC)n Simple_repeat Simple_repeat 1 226 0 8 1076 487 210 192 8 chr13 64374279 64374404 -55909908 - B1_Mur2 SINE Alu 0 149 2 8 1076 249 233 161 77 chr13 64377554 64377684 -55906628 - B1F SINE Alu 0 149 9 8 1076 914 50 8 0 chr13 64377700 64377820 -55906492 + (TC)n Simple_repeat Simple_repeat 2 122 0 8 1076 405 267 22 15 chr13 64378258 64378395 -55905917 + ID_B1 SINE B4 86 223 -1 8 1076 336 302 37 73 chr13 64378408 64378544 -55905768 + RSINE1 SINE B4 4 134 -31 8 1076 522 266 137 11 chr13 64378890 64379065 -55905247 + B3A SINE B2 1 197 -1 8 1076 496 307 66 0 chr13 64379106 64379272 -55905040 + B4A SINE B4 11 187 -105 8 1076 424 248 88 0 chr13 64379435 64379548 -55904764 + B3 SINE B2 1 123 -93 8 1076 27 29 0 0 chr13 64379588 64379622 -55904690 + AT_rich Low_complexity Low_complexity 1 34 0 8 1076 468 299 45 0 chr13 64379631 64379765 -55904547 + B1F1 SINE Alu 2 141 -8 8 1076 729 157 0 55 chr13 64379779 64379907 -55904405 - B1_Mur2 SINE Alu 0 149 29 8 1076 519 186 0 47 chr13 64379957 64380064 -55904248 - B1_Mur3 SINE Alu -1 148 47 8 1076 246 203 40 26 chr13 64380312 64380388 -55903924 + MTEb LTR MaLR 296 372 -7 8 1076 205 128 51 0 chr13 64380469 64380508 -55903804 + CT-rich Low_complexity Low_complexity 2 42 0 8 1076 492 227 127 15 chr13 64380524 64380658 -55903654 - B1_Mur2 SINE Alu 0 149 1 8 1076 267 292 60 81 chr13 64380687 64380836 -55903476 + MLT1A LTR MaLR 3 148 -226 8 1076 1170 68 7 0 chr13 64381142 64381289 -55903023 + B1_Mus1 SINE Alu 1 148 0 9 1076 929 63 0 0 chr13 64382034 64382160 -55902152 - B1_Mus2 SINE Alu -9 138 13 9 1076 405 73 0 0 chr13 64382160 64382215 -55902097 + B2_Mm2 SINE B2 3 57 -138 9 1076 566 72 24 0 chr13 64382220 64382303 -55902009 + (GAAAA)n Simple_repeat Simple_repeat 2 86 0 9 1076 287 303 20 49 chr13 64382374 64382500 -55901812 - B3A SINE B2 -48 150 10 9 1076 1425 77 16 0 chr13 64382547 64382730 -55901582 - B2_Mm2 SINE B2 -8 187 2 9 1076 1079 73 0 7 chr13 64382742 64382893 -55901419 + (TTTTC)n Simple_repeat Simple_repeat 3 152 0 9 1076 1128 45 0 0 chr13 64382893 64383027 -55901285 - B1_Mm SINE Alu -12 135 2 9 1076 29 28 0 0 chr13 64383236 64383272 -55901040 + AT_rich Low_complexity Low_complexity 1 36 0 9 1076 531 0 0 0 chr13 64383272 64383331 -55900981 + (TG)n Simple_repeat Simple_repeat 2 60 0 9 1076 733 219 107 0 chr13 64383331 64383500 -55900812 - B3 SINE B2 -28 188 2 9 1076 403 252 18 64 chr13 64383500 64383608 -55900704 - B4A SINE B4 -61 231 129 9 1076 348 239 0 0 chr13 64383667 64383734 -55900578 - PB1D9 SINE Alu -52 68 2 9 1076 432 0 0 0 chr13 64383739 64383787 -55900525 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 1076 327 163 68 23 chr13 64383851 64383939 -55900373 - PB1D9 SINE Alu -2 118 27 9 1076 222 295 0 13 chr13 64384143 64384222 -55900090 - ID4 SINE ID -4 79 2 9 1076 250 322 11 0 chr13 64384233 64384320 -55899992 - PB1D10 SINE Alu -9 108 21 9 1076 425 220 202 0 chr13 64384803 64384912 -55899400 - ID_B1 SINE B4 -3 221 91 9 1076 303 28 0 0 chr13 64385044 64385080 -55899232 + (TC)n Simple_repeat Simple_repeat 1 36 0 9 1076 234 0 0 0 chr13 64385083 64385109 -55899203 + (TG)n Simple_repeat Simple_repeat 1 26 0 9 1076 334 244 13 0 chr13 64385121 64385199 -55899113 - RSINE1 SINE B4 -43 122 44 9 1076 560 219 19 0 chr13 64385197 64385302 -55899010 + B1_Mur1 SINE Alu 24 130 -19 9 1076 369 0 0 0 chr13 64385302 64385343 -55898969 + (TC)n Simple_repeat Simple_repeat 1 41 0 9 1076 665 43 11 0 chr13 64385343 64385435 -55898877 + (CA)n Simple_repeat Simple_repeat 1 94 0 9 1076 1543 185 51 75 chr13 64385527 64385901 -55898411 + ORR1D1 LTR MaLR 10 374 0 9 1076 257 272 3 0 chr13 64385950 64386034 -55898278 - L1M5 LINE L1 -392 5787 5703 9 1076 230 191 21 0 chr13 64386091 64386138 -55898174 - B4A SINE B4 -170 122 75 9 1076 472 278 30 36 chr13 64386140 64386308 -55898004 - B3A SINE B2 -6 192 26 9 1076 24 32 0 0 chr13 64386340 64386371 -55897941 + AT_rich Low_complexity Low_complexity 1 31 0 9 1076 417 333 31 19 chr13 64386479 64386641 -55897671 - RSINE1 SINE B4 0 165 2 9 1076 264 82 32 16 chr13 64386722 64386784 -55897528 + (TTTTG)n Simple_repeat Simple_repeat 2 64 0 9 1076 565 159 16 208 chr13 64386799 64386982 -55897330 - B1_Mur2 SINE Alu -1 148 1 9 1076 230 229 42 0 chr13 64387363 64387411 -55896901 - ID2 SINE ID -22 61 12 9 1076 1247 266 38 84 chr13 64387421 64387946 -55896366 + RLTR20B3 LTR ERVK 21 521 -56 9 1076 283 217 48 12 chr13 64388019 64388103 -55896209 - PB1 SINE Alu -18 109 23 9 1076 301 235 47 0 chr13 64388601 64388686 -55895626 + ORR1C2 LTR MaLR 237 325 -59 9 1076 330 26 0 0 chr13 64388825 64388864 -55895448 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1076 1412 149 131 7 chr13 64388941 64389232 -55895080 + ORR1C2 LTR MaLR 1 327 -57 9 1076 315 0 0 0 chr13 64389232 64389267 -55895045 + (T)n Simple_repeat Simple_repeat 1 35 0 9 1076 980 75 6 99 chr13 64389267 64389429 -55894883 - B1_Mus2 SINE Alu 0 147 1 9 1076 263 152 43 0 chr13 64389476 64389522 -55894790 - U6 snRNA snRNA 0 107 60 9 1076 5071 137 104 35 chr13 64389644 64390676 -55893636 + RLTR25A LTR ERVK 1 1103 0 9 1076 394 282 0 0 chr13 64390749 64390834 -55893478 + PB1D10 SINE Alu 2 86 -31 9 1076 478 277 0 0 chr13 64390939 64391058 -55893254 - B3A SINE B2 -74 124 6 9 1076 29 60 0 0 chr13 64391113 64391163 -55893149 + AT_rich Low_complexity Low_complexity 1 50 0 9 1076 386 115 0 49 chr13 64391440 64391522 -55892790 - PB1D9 SINE Alu -2 118 41 9 1076 377 220 223 25 chr13 64391554 64391675 -55892637 - B1F SINE Alu 0 149 5 9 1076 180 0 0 0 chr13 64391752 64391772 -55892540 + (TG)n Simple_repeat Simple_repeat 1 20 0 9 1076 259 243 41 41 chr13 64391871 64391944 -55892368 + ID SINE ID 2 74 -150 9 1076 1254 41 0 0 chr13 64392239 64392386 -55891926 + B1_Mus1 SINE Alu 2 148 0 9 1076 1311 87 27 16 chr13 64392596 64392783 -55891529 - B2_Mm1t SINE B2 -3 190 2 9 1076 221 222 17 85 chr13 64392821 64392880 -55891432 - B4A SINE B4 -151 141 87 9 1076 865 177 133 37 chr13 64392936 64393124 -55891188 - B3 SINE B2 -10 206 1 9 1076 23 68 0 0 chr13 64393212 64393256 -55891056 + AT_rich Low_complexity Low_complexity 1 44 0 9 1076 275 203 14 0 chr13 64394013 64394082 -55890230 + GA-rich Low_complexity Low_complexity 6 75 0 9 1076 710 214 0 27 chr13 64394243 64394392 -55889920 - B1_Mur1 SINE Alu 0 149 5 9 1076 1447 147 199 3 chr13 64394506 64394813 -55889499 + ORR1B2 LTR MaLR 1 367 0 9 1076 1595 32 5 5 chr13 64394869 64395059 -55889253 + B2_Mm1t SINE B2 2 191 -2 9 1076 751 176 0 8 chr13 64395222 64395348 -55888964 + RSINE1 SINE B4 3 127 -38 9 1076 451 250 17 17 chr13 64395438 64395556 -55888756 + B1_Mur1 SINE Alu 32 149 0 9 1076 524 163 0 0 chr13 64395573 64395659 -55888653 + B1_Mur2 SINE Alu 43 128 -21 9 1076 366 175 12 12 chr13 64395667 64395695 -55888617 + A-rich Low_complexity Low_complexity 4 30 0 9 1076 1058 135 6 0 chr13 64395695 64395873 -55888439 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 9 1076 366 175 12 12 chr13 64395873 64395891 -55888421 + A-rich Low_complexity Low_complexity 31 48 0 9 1076 1455 0 0 32 chr13 64395891 64396077 -55888235 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 9 1076 366 175 12 12 chr13 64396077 64396110 -55888202 + A-rich Low_complexity Low_complexity 49 82 0 9 1076 1419 11 0 27 chr13 64396110 64396294 -55888018 + (GGGAA)n Simple_repeat Simple_repeat 1 179 0 9 1076 731 101 0 90 chr13 64396296 64396660 -55887652 + GA-rich Low_complexity Low_complexity 1 331 0 9 1076 376 152 75 54 chr13 64397381 64397494 -55886818 - PB1D9 SINE Alu -2 115 1 9 1076 243 227 86 54 chr13 64397412 64397505 -55886807 - B4A SINE B4 -123 169 74 9 1076 410 184 227 11 chr13 64397744 64397832 -55886480 - U6 snRNA snRNA 0 107 1 9 1076 667 254 10 54 chr13 64397863 64398067 -55886245 - B3A SINE B2 -2 196 2 9 1076 1645 32 0 5 chr13 64398076 64398266 -55886046 - B2_Mm1a SINE B2 -4 189 1 9 1076 464 192 176 55 chr13 64398800 64398965 -55885347 - B3A SINE B2 -11 187 3 9 1076 265 269 32 21 chr13 64399107 64399202 -55885110 - MER20 DNA MER1_type -70 149 54 9 1076 267 200 0 0 chr13 64400017 64400072 -55884240 - B3 SINE B2 0 216 162 9 1076 287 260 13 13 chr13 64400081 64400159 -55884153 - MER21B LTR ERV1 -279 584 507 9 1076 744 262 105 67 chr13 64400209 64400460 -55883852 + MTE2a LTR MaLR 20 289 -130 9 1076 321 89 0 0 chr13 64400460 64400505 -55883807 + (CA)n Simple_repeat Simple_repeat 2 46 0 9 1076 744 257 99 67 chr13 64400505 64400633 -55883679 + MTE2a LTR MaLR 249 379 0 9 1076 1330 34 40 0 chr13 64400816 64400993 -55883319 - MTB LTR MaLR -8 392 209 9 1076 992 79 0 7 chr13 64400978 64401119 -55883193 + MTB LTR MaLR 258 397 -3 9 1076 6318 86 25 98 chr13 64401139 64401525 -55882787 + MTB-int LTR MaLR 1 389 -709 9 1076 7560 80 18 53 chr13 64401525 64402666 -55881646 + Lx3_Mus LINE L1 5909 7009 0 9 1076 6318 86 25 98 chr13 64402666 64403464 -55880848 + MTB-int LTR MaLR 390 1098 0 9 1076 2939 70 39 13 chr13 64403464 64403644 -55880668 + MTB LTR MaLR 1 193 -207 9 1076 1170 42 0 20 chr13 64403644 64403779 -55880533 + B1_Mus2 SINE Alu 2 136 -11 9 1076 243 0 0 0 chr13 64403779 64403806 -55880506 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1076 1170 42 0 20 chr13 64403806 64403817 -55880495 + B1_Mus2 SINE Alu 137 145 -2 9 1076 2939 70 39 13 chr13 64403817 64404026 -55880286 + MTB LTR MaLR 194 400 0 9 1076 442 224 0 0 chr13 64404027 64404112 -55880200 - B3 SINE B2 -131 85 1 9 1076 395 262 107 0 chr13 64404131 64404253 -55880059 - B3 SINE B2 -5 211 77 9 1076 252 301 57 28 chr13 64404368 64404474 -55879838 + B3A SINE B2 58 166 -32 9 1076 242 299 13 25 chr13 64404609 64404688 -55879624 - RMER17B LTR ERVK -221 737 660 9 1076 729 247 83 88 chr13 64404767 64404862 -55879450 - RMER13A LTR ERVK -453 407 308 9 1076 1143 37 0 0 chr13 64404862 64404996 -55879316 + B1_Mm SINE Alu 1 134 -13 9 1076 183 42 0 0 chr13 64404996 64405020 -55879292 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 9 1076 192 40 0 0 chr13 64405020 64405044 -55879268 + (TA)n Simple_repeat Simple_repeat 1 25 0 9 1076 729 247 83 88 chr13 64405044 64405355 -55878957 - RMER13A LTR ERVK -553 307 3 9 1076 243 104 42 0 chr13 64405355 64405399 -55878913 + B3 SINE B2 171 216 0 9 1076 1441 45 50 0 chr13 64405419 64405598 -55878714 + B2_Mm1t SINE B2 1 188 -5 9 1076 279 222 16 0 chr13 64405615 64405678 -55878634 + B1_Mur4 SINE Alu 2 65 -85 9 1076 303 212 0 66 chr13 64406898 64406989 -55877323 + PB1D10 SINE Alu 33 117 0 9 1076 2778 28 0 0 chr13 64407021 64407344 -55876968 - L1Md_A LINE L1 -1 6581 6259 9 1076 1856 103 48 10 chr13 64407926 64408220 -55876092 + L1_Mus3 LINE L1 6334 6638 0 9 1076 2436 300 104 42 chr13 64408224 64409253 -55875059 + MTE-int LTR MaLR 170 1262 -318 9 1076 1892 226 22 7 chr13 64409254 64409659 -55874653 + MTD LTR MaLR 1 411 -8 9 1076 418 244 45 68 chr13 64409671 64409803 -55874509 + MTE-int LTR MaLR 1288 1416 -164 9 1076 821 244 11 0 chr13 64409834 64410014 -55874298 - B3A SINE B2 -16 182 1 1 1076 485 180 99 0 chr13 64410735 64410846 -55873466 + RSINE1 SINE B4 15 136 -29 1 1076 225 263 112 56 chr13 64410900 64411061 -55873251 + L1MA7 LINE L1 5161 5330 -813 1 1076 677 238 90 76 chr13 64411157 64411434 -55872878 + B4 SINE B4 2 282 -10 1 1076 1783 278 61 45 chr13 64411482 64411899 -55872413 + L1MA7 LINE L1 5388 5832 -459 1 1076 692 181 7 46 chr13 64411899 64412050 -55872262 - B1_Mur3 SINE Alu -4 145 1 1 1076 1783 278 61 45 chr13 64412050 64412381 -55871931 + L1MA7 LINE L1 5833 6148 -143 1 1076 1275 81 46 0 chr13 64412387 64412560 -55871752 + B2_Mm2 SINE B2 2 182 -13 1 1076 258 243 122 0 chr13 64412586 64412660 -55871652 + L1MA4 LINE L1 5694 5776 -524 1 1076 367 230 76 41 chr13 64412716 64412861 -55871451 + L1MA4 LINE L1 5783 5932 -368 1 1076 487 237 83 17 chr13 64414326 64414446 -55869866 + B3 SINE B2 2 129 -87 1 1076 484 272 120 0 chr13 64414465 64414590 -55869722 + B3A SINE B2 24 163 -35 1 1076 934 116 14 7 chr13 64414688 64414835 -55869477 + B1_Mus1 SINE Alu 1 148 0 1 1076 407 269 115 76 chr13 64414874 64415031 -55869281 - RSINE1 SINE B4 0 165 3 1 1076 473 225 27 0 chr13 64415036 64415147 -55869165 - ERVL-B4-int LTR ERVL -417 5297 5184 1 1076 580 252 0 15 chr13 64415462 64415595 -55868717 - RSINE1 SINE B4 0 165 35 1 1076 493 274 92 13 chr13 64415656 64415885 -55868427 + RLTR15 LTR ERVK 1 247 -112 1 1076 496 267 168 42 chr13 64416260 64416664 -55867648 + RLTR12B LTR ERVK 18 472 -56 1 1076 303 233 50 0 chr13 64416849 64416909 -55867403 + RSINE1 SINE B4 73 135 -30 1 1076 1375 39 11 0 chr13 64417358 64417536 -55866776 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1076 1125 77 0 0 chr13 64417542 64417685 -55866627 - B1_Mus1 SINE Alu -5 143 1 1 1076 1340 87 0 26 chr13 64417694 64417884 -55866428 - B2_Mm2 SINE B2 -9 186 2 1 1076 191 353 11 34 chr13 64417929 64418017 -55866295 + L2a LINE L2 3338 3423 -3 1 1076 740 264 178 62 chr13 64418150 64418408 -55865904 - B4 SINE B4 -4 288 1 1 1076 1029 81 117 12 chr13 64418440 64418603 -55865709 + B2_Mm2 SINE B2 2 181 -14 1 1076 23 25 0 24 chr13 64418603 64418614 -55865698 + AT_rich Low_complexity Low_complexity 1 11 0 1 1076 1279 27 0 0 chr13 64418614 64418760 -55865552 - B1_Mm SINE Alu -1 146 1 1 1076 23 25 0 24 chr13 64418760 64418789 -55865523 + AT_rich Low_complexity Low_complexity 1 29 0 1 1076 342 215 108 0 chr13 64418826 64418839 -55865473 + ID_B1 SINE B4 71 90 -134 1 1076 315 226 97 32 chr13 64418839 64418931 -55865381 + B1F2 SINE Alu 3 94 -33 1 1076 1271 80 11 17 chr13 64419014 64419193 -55865119 - B2_Mm2 SINE B2 -17 178 1 1 1076 633 188 78 28 chr13 64419228 64419370 -55864942 - B1_Mur2 SINE Alu 0 149 1 1 1076 894 219 44 10 chr13 64419375 64419393 -55864919 - B3 SINE B2 -6 210 189 1 1076 279 0 0 0 chr13 64419393 64419424 -55864888 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1076 894 219 44 10 chr13 64419424 64419608 -55864704 - B3 SINE B2 -28 188 2 1 1076 22 0 0 0 chr13 64419612 64419634 -55864678 + AT_rich Low_complexity Low_complexity 1 22 0 1 1076 1308 154 18 0 chr13 64419957 64420178 -55864134 + URR1B DNA MER1_type 1 225 0 1 1076 429 301 25 13 chr13 64420341 64420499 -55863813 - RSINE1 SINE B4 -3 162 3 1 1076 297 264 169 8 chr13 64420499 64420629 -55863683 - HERVL40-int LTR ERVL -3993 1537 1387 1 1076 880 163 7 33 chr13 64420774 64420926 -55863386 - B1_Mur3 SINE Alu -1 148 1 1 1076 1121 65 0 0 chr13 64421163 64421316 -55862996 + B2_Mm2 SINE B2 2 154 -41 1 1076 2456 195 67 67 chr13 64421340 64421951 -55862361 - RMER19C LTR ERVK 0 611 1 1 1076 1190 55 7 0 chr13 64422057 64422203 -55862109 - B1_Mm SINE Alu 0 147 1 1 1076 280 337 21 0 chr13 64422654 64422749 -55861563 - B4 SINE B4 -169 123 27 1 1076 1322 92 12 0 chr13 64423313 64423486 -55860826 + B2_Mm1t SINE B2 1 175 -18 1 1076 330 260 25 72 chr13 64423486 64423807 -55860505 - MMSAT4 Satellite Satellite -6 305 1 1 1076 385 267 19 19 chr13 64423922 64424131 -55860181 - MMSAT4 Satellite Satellite 0 209 1 1 1076 1216 48 0 0 chr13 64424221 64424366 -55859946 - B1_Mus2 SINE Alu 0 147 3 1 1076 495 0 0 0 chr13 64424868 64424923 -55859389 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 1 1076 1190 63 0 0 chr13 64424923 64425081 -55859231 - B2_Mm2 SINE B2 -36 159 2 1 1076 574 191 8 17 chr13 64425775 64425892 -55858420 + PB1D9 SINE Alu 5 120 0 1 1076 225 94 0 0 chr13 64425895 64425927 -55858385 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 1 1076 1031 133 194 0 chr13 64426178 64426358 -55857954 + B3 SINE B2 2 216 0 1 1076 711 187 259 17 chr13 64426371 64426545 -55857767 + B3 SINE B2 1 216 0 1 1076 651 257 34 9 chr13 64426750 64426942 -55857370 + B3A SINE B2 14 211 -5 1 1076 183 42 0 0 chr13 64427004 64427028 -55857284 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1 1076 736 143 1 0 chr13 64427029 64427159 -55857153 - B1_Mus1 SINE Alu -12 136 5 1 1076 1019 103 0 7 chr13 64427184 64427330 -55856982 + B1_Mus1 SINE Alu 2 146 -2 1 1076 230 73 24 0 chr13 64427331 64427372 -55856940 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 1 1076 307 257 83 0 chr13 64427388 64427497 -55856815 - L1ME3B LINE L1 -242 5998 5881 1 1076 748 230 0 26 chr13 64427522 64427674 -55856638 - B1_Mur1 SINE Alu 0 149 2 1 1076 23 33 0 0 chr13 64427685 64427715 -55856597 + AT_rich Low_complexity Low_complexity 1 30 0 1 1076 27 0 0 0 chr13 64428265 64428292 -55856020 + AT_rich Low_complexity Low_complexity 1 27 0 1 1076 717 297 66 33 chr13 64428318 64428590 -55855722 - B4A SINE B4 -9 283 3 1 1076 2155 164 65 3 chr13 64428590 64428976 -55855336 + MTC LTR MaLR 1 410 -11 1 1076 346 109 0 0 chr13 64428988 64429043 -55855269 - ORR1B1 LTR MaLR 0 394 340 1 1076 180 0 0 0 chr13 64429053 64429073 -55855239 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1 1076 1050 106 0 36 chr13 64429073 64429240 -55855072 - B2_Mm2 SINE B2 -33 162 2 1 1076 1112 67 0 0 chr13 64429244 64429394 -55854918 - B2_Mm2 SINE B2 -26 169 20 1 1076 2077 137 18 3 chr13 64429401 64429739 -55854573 - ORR1B1 LTR MaLR -41 353 11 1 1076 1490 68 5 5 chr13 64429749 64429942 -55854370 - B2_Mm1a SINE B2 0 193 1 1 1076 693 224 37 0 chr13 64429996 64430130 -55854182 + B1_Mur1 SINE Alu 2 140 -9 1 1076 486 0 0 0 chr13 64430148 64430202 -55854110 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1 1076 582 239 0 8 chr13 64430202 64430320 -55853992 - PB1 SINE Alu -9 118 2 1 1076 1234 71 94 0 chr13 64431142 64431312 -55853000 - B2_Mm2 SINE B2 -9 186 1 1 1076 314 244 45 34 chr13 64431503 64431592 -55852720 - RSINE1 SINE B4 -68 97 8 1 1076 962 153 0 7 chr13 64432001 64432152 -55852160 + B1_Mur4 SINE Alu 1 150 0 1 1076 195 152 0 0 chr13 64432174 64432220 -55852092 + (TAG)n Simple_repeat Simple_repeat 3 48 0 1 1076 231 184 0 39 chr13 64432220 64432271 -55852041 + A-rich Low_complexity Low_complexity 4 52 0 1 1076 1234 27 0 7 chr13 64432367 64432514 -55851798 - B1_Mm SINE Alu 0 147 2 1 1076 1451 79 5 0 chr13 64432735 64432925 -55851387 - B2_Mm1t SINE B2 -2 191 1 1 1076 845 170 13 20 chr13 64433018 64433168 -55851144 - B1_Mur2 SINE Alu 0 149 1 1 1076 334 269 73 74 chr13 64433197 64433504 -55850808 - B4 SINE B4 -18 274 2 1 1076 504 182 0 10 chr13 64433510 64433610 -55850702 + ID_B1 SINE B4 105 203 -21 1 1076 24 32 0 0 chr13 64434416 64434447 -55849865 + AT_rich Low_complexity Low_complexity 1 31 0 1 1076 372 271 62 32 chr13 64434447 64434681 -55849631 + L1ME2 LINE L1 5651 5925 -239 1 1076 4948 148 76 4 chr13 64434683 64435485 -55848827 + RMER13A LTR ERVK 1 860 0 1 1076 681 61 10 0 chr13 64435653 64435751 -55848561 - B1_Mus2 SINE Alu -48 99 1 1 1076 352 91 0 40 chr13 64435773 64435840 -55848472 - B2_Mm2 SINE B2 -107 109 47 1 1076 933 107 121 36 chr13 64435872 64436037 -55848275 - B2_Mm1t SINE B2 -14 179 1 1 1076 518 235 117 96 chr13 64436170 64436358 -55847954 + B3A SINE B2 7 198 0 1 1076 1749 138 138 3 chr13 64437066 64437371 -55846941 - ORR1A1 LTR MaLR 0 346 1 1 1076 545 28 0 14 chr13 64437371 64437443 -55846869 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 1076 342 307 8 15 chr13 64437443 64437569 -55846743 - B3A SINE B2 -85 131 9 1 1076 451 217 0 9 chr13 64437580 64437687 -55846625 - B1F SINE Alu -1 148 43 1 1076 584 241 17 0 chr13 64437718 64437834 -55846478 - PB1D9 SINE Alu -2 118 1 1 1076 1396 87 5 0 chr13 64437992 64438177 -55846135 + B2_Mm1a SINE B2 1 186 -7 1 1076 578 293 57 9 chr13 64438213 64438423 -55845889 + ID_B1 SINE B4 2 221 -3 1 1076 547 294 181 3 chr13 64438583 64438893 -55845419 - L1MB2 LINE L1 -169 6002 5638 1 1076 709 200 177 6 chr13 64438935 64439116 -55845196 - B3 SINE B2 0 216 5 1 1076 696 232 61 9 chr13 64439127 64439297 -55845015 - L1MB4 LINE L1 -162 6018 5838 1 1076 3398 135 59 168 chr13 64439297 64439737 -55844575 - RMER6A LTR ERVK 0 756 343 1 1076 1493 65 5 0 chr13 64439737 64439923 -55844389 + B2_Mm1t SINE B2 2 188 -5 1 1076 3398 135 59 168 chr13 64439923 64440331 -55843981 - RMER6A LTR ERVK -414 342 1 1 1076 696 232 61 9 chr13 64440331 64440390 -55843922 - L1MB4 LINE L1 -343 5837 5778 1 1076 758 133 0 0 chr13 64440431 64440551 -55843761 + B1_Mus1 SINE Alu 29 148 0 1 1076 380 223 62 9 chr13 64440688 64440801 -55843511 - Tigger5 DNA MER2_type 0 2406 2288 1 1076 577 316 7 0 chr13 64440853 64441008 -55843304 - RSINE1 SINE B4 -6 159 4 1 1076 275 260 64 46 chr13 64441008 64441117 -55843195 - Tigger5 DNA MER2_type -117 2289 2179 1 1076 534 247 6 88 chr13 64441127 64441287 -55843025 - Tigger5 DNA MER2_type -2177 229 83 1 1076 1382 108 0 5 chr13 64441365 64441560 -55842752 + B2_Mm2 SINE B2 2 195 0 1 1076 243 258 16 0 chr13 64441615 64441677 -55842635 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 1076 1462 60 16 11 chr13 64441733 64441919 -55842393 - B2_Mm2 SINE B2 -8 187 1 1 1076 490 269 18 26 chr13 64442039 64442239 -55842073 - L1MB4 LINE L1 -679 5501 5305 1 1076 342 278 101 34 chr13 64442263 64442412 -55841900 + MLT1B LTR MaLR 35 193 -181 1 1076 180 111 0 0 chr13 64442413 64442440 -55841872 + (TTCTCC)n Simple_repeat Simple_repeat 1 27 0 1 1076 447 260 121 28 chr13 64442452 64442634 -55841678 + MLT1B LTR MaLR 192 390 0 1 1076 372 240 45 130 chr13 64442713 64442726 -55841586 + B4A SINE B4 78 150 -142 1 1076 850 156 0 26 chr13 64442726 64442877 -55841435 + B1_Mur1 SINE Alu 3 149 0 1 1076 372 240 45 130 chr13 64442877 64442890 -55841422 + B4A SINE B4 151 239 -53 1 1076 541 234 55 55 chr13 64443273 64443436 -55840876 + RSINE1 SINE B4 3 165 0 1 1076 215 125 0 24 chr13 64443445 64443486 -55840826 + (TAA)n Simple_repeat Simple_repeat 3 42 0 1 1076 291 288 0 0 chr13 64443518 64443584 -55840728 + ID_B1 SINE B4 86 151 -73 1 1076 1238 48 0 0 chr13 64443621 64443767 -55840545 + B1_Mm SINE Alu 1 146 -1 1 1076 231 143 0 0 chr13 64443863 64443898 -55840414 + L1MC LINE L1 5539 5573 -771 1 1076 33 0 0 0 chr13 64443951 64443984 -55840328 + AT_rich Low_complexity Low_complexity 1 33 0 1 1076 593 234 29 0 chr13 64443984 64444121 -55840191 - B1_Mur2 SINE Alu -7 142 2 1 1076 431 35 18 0 chr13 64444126 64444183 -55840129 + (TTA)n Simple_repeat Simple_repeat 3 60 0 1 1076 509 244 23 8 chr13 64444196 64444324 -55839988 - RSINE1 SINE B4 -35 130 1 1 1076 425 250 21 0 chr13 64444633 64444729 -55839583 + PB1D10 SINE Alu 1 98 -19 1 1076 371 301 40 53 chr13 64445999 64446150 -55838162 + B1F2 SINE Alu 1 149 0 1 1076 471 258 121 39 chr13 64446698 64446904 -55837408 + ID_B1 SINE B4 2 224 0 1 1076 313 219 12 12 chr13 64446926 64447009 -55837303 + B4 SINE B4 104 186 -106 1 1076 833 29 0 9 chr13 64447021 64447126 -55837186 + (GAAA)n Simple_repeat Simple_repeat 3 106 0 1 1076 228 86 0 0 chr13 64447128 64447163 -55837149 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 1 1076 477 0 0 0 chr13 64447218 64447271 -55837041 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1076 767 251 154 45 chr13 64447737 64448029 -55836283 + ORR1E LTR MaLR 6 329 -30 1 1076 1180 64 0 0 chr13 64448030 64448186 -55836126 - B2_Mm2 SINE B2 -38 157 2 1 1076 726 242 62 74 chr13 64449243 64449426 -55834886 + RLTR11A2 LTR ERVK 115 286 -241 1 1076 934 81 0 44 chr13 64449426 64449606 -55834706 + (GGA)n Simple_repeat Simple_repeat 2 173 0 1 1076 726 242 62 74 chr13 64449606 64449761 -55834551 + RLTR11A2 LTR ERVK 287 448 -79 1 1076 1303 69 75 0 chr13 64449767 64449941 -55834371 - B2_Mm2 SINE B2 -7 188 2 1 1076 1473 88 0 0 chr13 64451240 64451580 -55832732 + (GAA)n Simple_repeat Simple_repeat 1 340 0 1 1076 598 231 114 40 chr13 64451601 64451777 -55832535 + ID_B1 SINE B4 2 190 -34 1 1076 221 0 35 0 chr13 64451842 64451871 -55832441 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 1 1076 430 270 94 30 chr13 64451874 64452141 -55832171 + L1MEf LINE L1 924 1207 -4993 1 1076 947 274 59 52 chr13 64452806 64453249 -55831063 + RLTR12B LTR ERVK 41 486 -42 1 1076 1251 134 76 20 chr13 64453804 64454055 -55830257 + RMER10B LTR ERVL 1 265 -133 1 1076 847 194 18 82 chr13 64454057 64454276 -55830036 + RMER10B LTR ERVL 194 398 0 1 1076 2311 160 63 5 chr13 64454309 64454705 -55829607 - MTC LTR MaLR 0 421 3 1 1076 276 301 57 74 chr13 64454743 64454973 -55829339 - RLTR6-int LTR ERV1 -131 7647 7422 1 1076 366 204 0 0 chr13 64454974 64455077 -55829235 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1076 1310 68 22 11 chr13 64455174 64455353 -55828959 - B2_Mm1t SINE B2 -8 185 5 1 1076 989 181 74 78 chr13 64455567 64455824 -55828488 - RLTR19-int LTR ERVK -1756 4381 4126 1 1076 284 200 77 0 chr13 64455895 64455960 -55828352 - RLTR19-int LTR ERVK -2030 4107 4038 1 1076 510 191 41 97 chr13 64456030 64456175 -55828137 - RLTR19-int LTR ERVK -2348 3789 3653 1 1076 1374 50 55 11 chr13 64456179 64456360 -55827952 + B2_Mm2 SINE B2 4 192 -3 1 1076 281 250 16 0 chr13 64456360 64456424 -55827888 - RLTR19-int LTR ERVK -2895 3242 3178 1 1076 551 276 77 19 chr13 64456700 64456953 -55827359 - MYSERV6-int LTR ERVK -1451 7508 7329 1 1076 7654 82 1 0 chr13 64457018 64458681 -55825631 + L1_Mus2 LINE L1 4902 6566 0 1 1076 738 251 96 52 chr13 64459210 64459693 -55824619 - RLTR42-int LTR ERVK -3565 2572 1870 1 1076 1662 129 14 28 chr13 64459906 64460192 -55824120 - RLTR14 LTR ERV1 -54 328 47 1 1076 905 160 14 14 chr13 64460275 64460421 -55823891 - B1_Mur4 SINE Alu 0 150 5 1 1076 940 99 62 6 chr13 64460452 64460614 -55823698 - B2_Mm2 SINE B2 -16 179 9 1 1076 796 108 0 16 chr13 64460682 64460804 -55823508 - B2_Mm2 SINE B2 -70 125 6 1 1076 540 225 149 6 chr13 64460932 64461108 -55823204 - RLTR42-int LTR ERVK -4222 1300 1129 1 1076 1349 179 4 42 chr13 64461682 64462006 -55822306 + ORR1B2-int LTR MaLR 1228 1521 -59 1 1076 1865 133 88 3 chr13 64462012 64462343 -55821969 + ORR1B2 LTR MaLR 1 359 -8 1 1076 373 244 0 0 chr13 64462453 64462535 -55821777 + B4A SINE B4 146 227 -65 1 1076 458 169 0 13 chr13 64463026 64463104 -55821208 + B3A SINE B2 1 77 -121 1 1076 1534 48 27 0 chr13 64463169 64463356 -55820956 - B2_Mm1t SINE B2 0 193 2 1 1076 622 259 95 78 chr13 64463432 64463738 -55820574 + MTEa LTR MaLR 39 349 -30 1 1076 340 103 17 17 chr13 64463882 64463941 -55820371 + MER31A LTR ERV1 55 113 -372 1 1076 586 148 57 0 chr13 64464329 64464451 -55819861 + URR1A DNA MER1_type 91 219 -7 1 1076 367 254 16 0 chr13 64464519 64464611 -55819701 + PB1D10 SINE Alu 3 98 -51 1 1076 309 226 217 12 chr13 64464618 64464779 -55819533 + L1MA6 LINE L1 6102 6295 -5 1 1076 399 241 148 35 chr13 64464784 64464926 -55819386 + RSINE1 SINE B4 2 159 -6 1 1076 391 246 252 31 chr13 64465648 64465874 -55818438 - B4A SINE B4 -16 276 1 1 1076 463 245 0 0 chr13 64465961 64466055 -55818257 - ID_B1 SINE B4 -130 94 1 1 1076 489 230 95 0 chr13 64466782 64466908 -55817404 + B1_Mur1 SINE Alu 2 139 -10 1 1076 727 268 48 5 chr13 64466910 64467116 -55817196 - ID_B1 SINE B4 -9 215 1 1 1076 328 302 93 9 chr13 64467421 64467528 -55816784 + RSINE1 SINE B4 8 123 -42 1 1076 555 221 43 43 chr13 64467571 64467732 -55816580 + B3A SINE B2 1 161 -37 1 1076 764 128 38 0 chr13 64468459 64468592 -55815720 - B1F2 SINE Alu 0 149 12 1 1076 1204 28 0 14 chr13 64468638 64468778 -55815534 + B1_Mm SINE Alu 1 139 -8 1 1076 216 0 0 0 chr13 64468778 64468802 -55815510 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1076 336 280 36 99 chr13 64468820 64468931 -55815381 + PB1D10 SINE Alu 3 106 -11 1 1076 317 256 47 0 chr13 64468969 64469055 -55815257 + Lx8 LINE L1 7133 7222 -251 1 1076 285 188 159 0 chr13 64469640 64469709 -55814603 + B3A SINE B2 1 80 -118 1 1076 460 101 434 0 chr13 64469716 64469815 -55814497 - B1_Mus1 SINE Alu -5 143 2 1 1076 519 149 263 0 chr13 64470143 64470257 -55814055 + B1_Mus1 SINE Alu 5 148 0 1 1076 1249 114 38 0 chr13 64470773 64470957 -55813355 - B2_Mm1t SINE B2 -2 191 1 1 1076 204 125 0 0 chr13 64472281 64472313 -55811999 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1076 950 58 14 7 chr13 64472313 64472453 -55811859 - B1_Mus1 SINE Alu 0 148 8 1 1076 226 191 196 0 chr13 64472506 64472581 -55811731 - B1_Mur2 SINE Alu -15 105 19 1 1076 1223 41 14 0 chr13 64472876 64473022 -55811290 - B1_Mus1 SINE Alu 0 148 1 1 1076 936 127 7 7 chr13 64473053 64473196 -55811116 - B1_Mur4 SINE Alu -6 144 2 1 1076 357 287 116 14 chr13 64473240 64473378 -55810934 + RSINE1 SINE B4 1 152 -13 1 1076 702 174 51 0 chr13 64473409 64473547 -55810765 - B1_Mm SINE Alu -2 145 1 1 1076 404 174 24 121 chr13 64473561 64473685 -55810627 + MT2B LTR ERVL 153 264 -337 1 1076 1056 36 0 0 chr13 64473578 64473715 -55810597 + B1_Mus2 SINE Alu 6 142 -5 1 1076 526 221 66 7 chr13 64473773 64473910 -55810402 + B1_Mur1 SINE Alu 3 147 -2 1 1076 438 291 26 33 chr13 64473998 64474173 -55810139 + B3A SINE B2 10 182 -34 1 1076 254 276 93 28 chr13 64474286 64474394 -55809918 - PB1D10 SINE Alu -2 115 1 1 1076 991 155 14 0 chr13 64474479 64474627 -55809685 + B1_Mur4 SINE Alu 1 150 0 1 1076 295 279 92 154 chr13 64474841 64475036 -55809276 - MER89 LTR ERV1 -163 396 214 1 1076 939 162 194 6 chr13 64475532 64475712 -55808600 - B3 SINE B2 -1 215 2 1 1076 1126 75 0 0 chr13 64476108 64476254 -55808058 - B1_Mm SINE Alu 0 147 2 1 1076 697 221 54 16 chr13 64476282 64476466 -55807846 + ID_B1 SINE B4 3 193 -31 1 1076 236 264 96 43 chr13 64476364 64476479 -55807833 + B1_Mur3 SINE Alu 7 127 -22 1 1076 237 241 163 132 chr13 64476926 64477055 -55807257 - ID_B1 SINE B4 -70 154 22 1 1076 542 277 19 43 chr13 64477340 64477502 -55806810 - RSINE1 SINE B4 -4 161 4 1 1076 225 0 0 0 chr13 64477627 64477652 -55806660 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1076 263 286 14 14 chr13 64478047 64478118 -55806194 - MER5A DNA MER1_type -56 133 63 1 1076 201 147 0 0 chr13 64478210 64478244 -55806068 + (CAA)n Simple_repeat Simple_repeat 3 36 0 1 1076 773 304 18 40 chr13 64478244 64478467 -55805845 - B4A SINE B4 -74 218 1 1 1076 966 111 7 27 chr13 64478489 64478637 -55805675 + B1_Mur4 SINE Alu 5 149 -1 1 1076 21 0 0 0 chr13 64478644 64478665 -55805647 + AT_rich Low_complexity Low_complexity 1 21 0 1 1076 3060 105 107 132 chr13 64479438 64480053 -55804259 + MT2B LTR ERVL 2 601 0 1 1076 515 272 0 0 chr13 64480450 64480553 -55803759 - RSINE1 SINE B4 -17 148 46 1 1076 726 12 0 0 chr13 64480553 64480636 -55803676 + (TTTTA)n Simple_repeat Simple_repeat 2 84 0 1 1076 346 195 57 11 chr13 64480714 64480802 -55803510 - B1_Mus1 SINE Alu -22 126 35 1 1076 707 188 0 29 chr13 64480818 64480955 -55803357 - B1_Mur1 SINE Alu -5 144 12 1 1076 431 192 135 0 chr13 64480965 64481069 -55803243 - PB1D9 SINE Alu 0 120 3 1 1076 523 293 108 20 chr13 64482004 64482199 -55802113 + B4 SINE B4 81 292 0 1 1076 342 0 0 0 chr13 64482578 64482616 -55801696 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 1076 239 311 132 26 chr13 64482632 64482708 -55801604 - RSINE1 SINE B4 0 165 82 1 1076 345 297 7 28 chr13 64483078 64483220 -55801092 + CT-rich Low_complexity Low_complexity 2 140 0 1 1076 235 257 0 41 chr13 64483741 64483814 -55800498 - MLT1A1 LTR MaLR -12 396 327 1 1076 486 0 0 0 chr13 64484448 64484502 -55799810 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1076 1239 35 0 0 chr13 64484771 64484916 -55799396 - B1_Mus2 SINE Alu -2 145 1 1 1076 996 198 91 0 chr13 64484936 64485133 -55799179 - B3 SINE B2 -1 215 1 1 1076 237 190 19 39 chr13 64485704 64485808 -55798504 + GA-rich Low_complexity Low_complexity 1 102 0 1 1076 1145 173 87 0 chr13 64485827 64486035 -55798277 + URR1A DNA MER1_type 1 226 0 1 1076 213 351 10 31 chr13 64486046 64486143 -55798169 + MIR3 SINE MIR 83 177 -31 1 1076 320 264 95 58 chr13 64486173 64486310 -55798002 - L1ME1 LINE L1 -13 6166 6025 1 1076 679 277 12 24 chr13 64486368 64486577 -55797735 - B3A SINE B2 -3 213 9 1 1076 581 281 14 7 chr13 64486608 64486755 -55797557 + ID_B1 SINE B4 77 224 0 1 1076 300 53 0 0 chr13 64486757 64486795 -55797517 + (GGAA)n Simple_repeat Simple_repeat 2 39 0 1 1076 965 156 0 39 chr13 64486916 64487070 -55797242 + B1_Mur4 SINE Alu 3 150 0 1 1076 180 0 0 0 chr13 64487087 64487107 -55797205 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1 1077 924 239 53 5 chr13 64488079 64488285 -55796027 - ID_B1 SINE B4 -7 217 2 1 1077 259 319 14 0 chr13 64488484 64488556 -55795756 - B4A SINE B4 -173 119 47 1 1077 237 33 0 0 chr13 64488770 64488800 -55795512 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1 1077 1054 67 0 0 chr13 64488803 64488937 -55795375 - B1_Mus2 SINE Alu -12 135 2 1 1077 293 189 0 0 chr13 64488947 64489000 -55795312 - ID_B1 SINE B4 -2 222 170 1 1077 523 299 122 0 chr13 64489004 64489151 -55795161 + RSINE1 SINE B4 1 165 0 1 1077 298 333 11 0 chr13 64489228 64489318 -55794994 - PB1D10 SINE Alu -26 91 1 1 1077 809 149 280 0 chr13 64489333 64489501 -55794811 - B3 SINE B2 -1 215 1 1 1077 255 230 102 11 chr13 64490779 64490867 -55793445 - ID_B1 SINE B4 -2 222 127 1 1077 237 247 55 110 chr13 64490867 64490888 -55793424 - PB1D9 SINE Alu -2 118 16 1 1077 724 193 21 0 chr13 64490941 64491081 -55793231 - B1_Mur4 SINE Alu 0 150 8 1 1077 439 336 21 0 chr13 64491140 64491280 -55793032 + B1F SINE Alu 1 143 -6 1 1077 304 247 12 12 chr13 64491483 64491569 -55792743 + L1MA7 LINE L1 3274 3359 -2781 1 1077 909 271 4 22 chr13 64492317 64492543 -55791769 + ID_B1 SINE B4 1 222 -2 1 1077 776 151 58 0 chr13 64492628 64492767 -55791545 + B1_Mm SINE Alu 1 147 0 1 1077 293 269 26 0 chr13 64492860 64492938 -55791374 + ID4 SINE ID 2 81 -2 1 1077 499 243 35 26 chr13 64492953 64493067 -55791245 + RSINE1 SINE B4 7 121 -44 1 1077 680 309 36 18 chr13 64493075 64493299 -55791013 + B4A SINE B4 3 230 -62 1 1077 679 175 7 59 chr13 64493303 64493455 -55790857 + B1F2 SINE Alu 5 148 -1 1 1077 430 246 188 23 chr13 64493585 64493718 -55790594 + ID_B1 SINE B4 70 224 0 1 1077 257 240 219 0 chr13 64493718 64493814 -55790498 + L1MA7 LINE L1 5373 5489 -802 1 1077 450 211 105 9 chr13 64493814 64493885 -55790427 + B3 SINE B2 1 70 -146 1 1077 480 35 0 0 chr13 64493885 64493943 -55790369 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1077 450 211 105 9 chr13 64493943 64493976 -55790336 + B3 SINE B2 71 113 -103 1 1077 234 0 0 0 chr13 64493990 64494016 -55790296 + (TA)n Simple_repeat Simple_repeat 2 27 0 1 1077 21 0 0 0 chr13 64494043 64494064 -55790248 + AT_rich Low_complexity Low_complexity 1 21 0 1 1077 379 300 0 98 chr13 64494077 64494199 -55790113 + B1_Mur1 SINE Alu 1 110 -39 1 1077 1323 218 161 48 chr13 64494442 64494938 -55789374 - RMER4B LTR ERVK 0 585 34 1 1077 1674 36 0 0 chr13 64494943 64495136 -55789176 - B2_Mm1a SINE B2 0 193 1 1 1077 1561 52 5 0 chr13 64495144 64495335 -55788977 - B2_Mm1a SINE B2 0 193 2 1 1077 1275 27 0 0 chr13 64495362 64495509 -55788803 + B1_Mm SINE Alu 1 147 0 1 1077 628 140 47 0 chr13 64495556 64495663 -55788649 + B1_Mur1 SINE Alu 18 129 -20 1 1077 288 258 32 21 chr13 64495666 64495761 -55788551 + L1MA7 LINE L1 5858 5953 -338 1 1077 371 252 109 54 chr13 64495949 64496135 -55788177 + L1MA7 LINE L1 6034 6239 -52 1 1077 429 70 0 0 chr13 64496135 64496192 -55788120 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1077 371 252 109 54 chr13 64496192 64496244 -55788068 + L1MA7 LINE L1 6240 6285 -6 1 1077 1296 27 0 0 chr13 64496357 64496505 -55787807 + B1_Mus1 SINE Alu 1 148 0 1 1077 722 286 13 40 chr13 64496532 64496758 -55787554 + ID_B1 SINE B4 1 220 -4 1 1077 877 160 0 11 chr13 64496774 64496812 -55787500 + polypyrimidine Low_complexity Low_complexity 140 177 0 1 1077 1473 39 0 0 chr13 64496812 64496992 -55787320 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 1 1077 877 160 0 11 chr13 64496992 64497130 -55787182 + polypyrimidine Low_complexity Low_complexity 4 139 0 1 1077 812 151 19 70 chr13 64497130 64497287 -55787025 - B1_Mur3 SINE Alu 0 149 1 1 1077 738 216 0 26 chr13 64498042 64498194 -55786118 - B1_Mus1 SINE Alu 0 148 1 1 1077 189 0 0 0 chr13 64498230 64498251 -55786061 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1077 401 277 58 64 chr13 64498388 64498656 -55785656 + MLT1E1A LTR MaLR 400 680 0 1 1077 354 204 31 41 chr13 64499069 64499166 -55785146 + PB1D10 SINE Alu 22 117 0 1 1077 385 252 131 0 chr13 64499787 64499894 -55784418 + ID_B1 SINE B4 85 205 -19 1 1077 204 67 0 0 chr13 64499902 64499932 -55784380 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 1077 210 273 0 0 chr13 64499932 64499987 -55784325 + A-rich Low_complexity Low_complexity 1 55 0 1 1077 379 303 7 108 chr13 64500232 64500380 -55783932 + ID_B1 SINE B4 84 216 -8 1 1077 517 242 113 0 chr13 64500387 64500511 -55783801 + B1_Mur1 SINE Alu 5 142 -7 2 1077 328 266 52 31 chr13 64500548 64500645 -55783667 + PB1D10 SINE Alu 18 116 -1 3 1077 707 33 11 0 chr13 64500645 64500735 -55783577 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 4 1077 213 229 39 103 chr13 64500763 64500841 -55783471 + ID4 SINE ID 1 73 -10 5 1077 296 77 0 19 chr13 64500922 64500975 -55783337 + (TTTTA)n Simple_repeat Simple_repeat 4 55 0 6 1077 1257 34 0 0 chr13 64500975 64501121 -55783191 - B1_Mm SINE Alu 0 147 2 7 1077 303 209 221 0 chr13 64501139 64501225 -55783087 + B1_Mur1 SINE Alu 5 109 -40 8 1077 235 175 0 0 chr13 64501222 64501262 -55783050 + ID_B1 SINE B4 133 172 -52 9 1077 1392 322 69 40 chr13 64502010 64502831 -55781481 + MER68-int LTR ERVL 1051 1895 -1095 1 1077 261 0 0 0 chr13 64502838 64502867 -55781445 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1077 661 229 121 73 chr13 64502871 64502970 -55781342 + MER68-int LTR ERVL 1924 2021 -969 1 1077 1070 121 7 0 chr13 64502970 64503119 -55781193 + B1_Mur4 SINE Alu 1 150 0 1 1077 661 229 121 73 chr13 64503119 64503415 -55780897 + MER68-int LTR ERVL 2022 2338 -652 1 1077 396 232 11 0 chr13 64504187 64504282 -55780030 - Lx7 LINE L1 -596 7100 7005 1 1077 696 74 0 61 chr13 64504285 64504400 -55779912 - BC1_Mm scRNA scRNA -44 108 1 1 1077 1972 192 59 34 chr13 64504402 64504707 -55779605 - Lx7 LINE L1 -616 7080 6759 1 1077 2037 159 16 134 chr13 64504707 64505107 -55779205 - RLTR23 LTR ERV1 0 430 74 1 1077 378 0 0 0 chr13 64505107 64505149 -55779163 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1 1077 2037 159 16 134 chr13 64505149 64505234 -55779078 - RLTR23 LTR ERV1 -357 73 2 1 1077 1972 192 59 34 chr13 64505234 64505371 -55778941 - Lx7 LINE L1 -938 6758 6627 1 1077 1459 127 35 13 chr13 64505362 64505593 -55778719 - Lx6 LINE L1 -936 6524 6289 1 1077 1312 166 26 62 chr13 64505611 64505912 -55778400 + Lx7 LINE L1 7170 7669 -27 1 1077 928 210 15 0 chr13 64505940 64506140 -55778172 - RMER10B LTR ERVL 0 398 196 2 1077 215 170 21 0 chr13 64506183 64506230 -55778082 + GA-rich Low_complexity Low_complexity 1 48 0 2 1077 1256 141 60 4 chr13 64506230 64506480 -55777832 - RMER10B LTR ERVL -134 264 1 2 1077 320 255 274 0 chr13 64506584 64506737 -55777575 + RMER15 LTR ERVL 366 560 -15 2 1077 346 264 110 16 chr13 64507116 64507243 -55777069 + MER77 LTR ERVL 469 607 0 2 1077 651 249 2 56 chr13 64507306 64507498 -55776814 - B3A SINE B2 -18 177 9 2 1077 773 172 0 0 chr13 64507558 64507686 -55776626 + B3 SINE B2 2 129 -87 2 1077 207 100 0 0 chr13 64507739 64507769 -55776543 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1077 226 26 51 26 chr13 64507797 64507836 -55776476 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 2 1077 254 301 145 0 chr13 64507847 64507930 -55776382 - PB1D10 SINE Alu -5 112 18 2 1077 280 130 54 36 chr13 64507957 64508013 -55776299 + PB1D9 SINE Alu 3 59 -61 3 1077 374 263 0 0 chr13 64508018 64508117 -55776195 + GA-rich Low_complexity Low_complexity 6 104 0 3 1077 476 211 28 19 chr13 64508119 64508225 -55776087 + B1_Mur1 SINE Alu 42 148 -1 3 1077 1450 65 43 0 chr13 64508388 64508574 -55775738 + B2_Mm2 SINE B2 1 194 -1 3 1077 1030 70 28 7 chr13 64508585 64508717 -55775595 + B1_Mm SINE Alu 1 136 -11 3 1077 351 0 0 0 chr13 64508717 64508756 -55775556 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1077 1030 70 28 7 chr13 64508756 64508767 -55775545 + B1_Mm SINE Alu 137 147 0 3 1077 267 79 0 0 chr13 64508893 64508931 -55775381 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 3 1077 1191 226 144 23 chr13 64509019 64509386 -55774926 + RLTR20A2 LTR ERVK 72 481 -97 3 1077 315 0 0 0 chr13 64509386 64509421 -55774891 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1077 1191 226 144 23 chr13 64509421 64509483 -55774829 + RLTR20A2 LTR ERVK 482 552 -26 3 1077 272 77 0 0 chr13 64509495 64509534 -55774778 + ORR1C2 LTR MaLR 331 369 -15 3 1077 272 180 82 0 chr13 64509744 64509805 -55774507 + ORR1D2 LTR MaLR 305 370 0 4 1077 1739 207 42 55 chr13 64509966 64510349 -55773963 - ORR1C1 LTR MaLR 0 378 1 4 1077 223 169 79 66 chr13 64510407 64510483 -55773829 - PB1D10 SINE Alu -1 116 40 4 1077 910 314 69 20 chr13 64510549 64510998 -55773314 - ERVL-B4-int LTR ERVL -325 5389 4919 4 1077 1776 112 93 26 chr13 64511077 64511390 -55772922 - MTC LTR MaLR -87 334 1 4 1077 374 203 0 0 chr13 64511392 64511456 -55772856 - ID4_ SINE ID -16 67 4 4 1077 328 250 25 0 chr13 64511458 64511538 -55772774 - PB1D10 SINE Alu 0 117 36 4 1077 628 233 107 28 chr13 64511618 64511795 -55772517 - ERVL-B4-int LTR ERVL -861 4853 4663 4 1077 481 205 169 20 chr13 64512151 64512334 -55771978 - ERVL-B4-int LTR ERVL -823 4662 4383 4 1077 600 264 40 0 chr13 64512424 64512549 -55771763 - RSINE1 SINE B4 -24 141 12 4 1077 1158 161 14 19 chr13 64512566 64512775 -55771537 - URR1B DNA MER1_type -1 224 17 4 1077 1219 230 75 42 chr13 64512950 64513282 -55771030 + Lx5 LINE L1 6708 7050 0 4 1077 1192 62 0 0 chr13 64513309 64513455 -55770857 + B1_Mus2 SINE Alu 1 146 -1 5 1077 804 302 134 85 chr13 64514024 64514330 -55769982 - ERVL-B4-int LTR ERVL -1319 4395 4052 4 1077 666 244 82 0 chr13 64514330 64514465 -55769847 + RSINE1 SINE B4 3 148 -17 5 1077 804 302 134 85 chr13 64514465 64514488 -55769824 - ERVL-B4-int LTR ERVL -1663 4051 4038 4 1077 306 50 0 0 chr13 64514488 64514528 -55769784 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1077 804 302 134 85 chr13 64514528 64514845 -55769467 - ERVL-B4-int LTR ERVL -1677 4037 3716 4 1077 1179 242 106 22 chr13 64514845 64515212 -55769100 + MTD LTR MaLR 8 405 -14 5 1077 646 285 196 19 chr13 64515214 64515525 -55768787 - ERVL-B4-int LTR ERVL -1993 3721 3356 4 1077 292 262 182 45 chr13 64515539 64515715 -55768597 - MT2A LTR ERVL 0 533 334 5 1077 389 307 8 34 chr13 64515713 64515831 -55768481 - MTEa LTR MaLR -264 115 1 5 1077 633 250 81 0 chr13 64515834 64516006 -55768306 - ERVL-B4-int LTR ERVL -2371 3343 3158 4 1077 859 236 70 12 chr13 64516010 64516266 -55768046 + Lx8 LINE L1 5656 5919 -1777 5 1077 1797 131 99 72 chr13 64516266 64516574 -55767738 + ORR1D1 LTR MaLR 3 300 -74 5 1077 198 0 0 0 chr13 64516574 64516596 -55767716 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 5 1077 639 0 0 0 chr13 64516596 64516667 -55767645 + (TTC)n Simple_repeat Simple_repeat 2 72 0 5 1077 1797 131 99 72 chr13 64516667 64516719 -55767593 + ORR1D1 LTR MaLR 301 373 -1 5 1077 750 294 58 67 chr13 64516719 64516895 -55767417 + Lx8 LINE L1 5920 6084 -1612 5 1077 677 161 0 3 chr13 64517187 64517312 -55767000 + B1_Mur1 SINE Alu 9 130 -19 6 1077 374 174 80 23 chr13 64517417 64517505 -55766807 + PB1D9 SINE Alu 22 114 -6 6 1077 933 194 31 109 chr13 64517521 64517880 -55766432 + RMER17C LTR ERVK 80 410 0 6 1077 862 116 14 0 chr13 64518879 64519026 -55765286 + (TCCC)n Simple_repeat Simple_repeat 2 150 0 6 1077 785 238 51 42 chr13 64519026 64519241 -55765071 - ID_B1 SINE B4 -6 218 2 6 1077 1573 127 112 136 chr13 64519337 64519524 -55764788 - RLTR14 LTR ERV1 0 382 166 6 1077 5006 70 6 0 chr13 64519524 64520163 -55764149 + L1_Mus1 LINE L1 5925 6567 0 6 1077 1573 127 112 136 chr13 64520163 64520366 -55763946 - RLTR14 LTR ERV1 -217 165 1 6 1077 228 163 0 0 chr13 64520397 64520440 -55763872 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1077 257 197 15 0 chr13 64520455 64520521 -55763791 + CT-rich Low_complexity Low_complexity 2 68 0 6 1077 534 217 17 3 chr13 64520863 64520993 -55763319 - B1_Mur1 SINE Alu -7 142 20 6 1077 260 362 73 29 chr13 64521067 64521340 -55762972 + L1M5 LINE L1 2305 2589 -3557 7 1077 393 268 116 0 chr13 64521369 64521481 -55762831 - B1F2 SINE Alu -3 146 22 7 1077 892 223 96 75 chr13 64521508 64521606 -55762706 + RMER17C LTR ERVK 1 96 -314 7 1077 810 120 0 0 chr13 64521606 64521731 -55762581 + (TC)n Simple_repeat Simple_repeat 2 126 0 7 1077 892 223 96 75 chr13 64521731 64521967 -55762345 + RMER17C LTR ERVK 97 342 -68 7 1077 1237 22 0 0 chr13 64522031 64522170 -55762142 + B1_Mm SINE Alu 1 139 -8 7 1077 183 42 0 0 chr13 64522170 64522194 -55762118 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1077 380 229 142 35 chr13 64522194 64522358 -55761954 - B3A SINE B2 -16 179 2 7 1077 196 30 29 29 chr13 64522647 64522681 -55761631 + (TGGGGG)n Simple_repeat Simple_repeat 1 34 0 7 1077 1161 261 50 18 chr13 64523523 64523862 -55760450 - ORR1E LTR MaLR -9 350 1 7 1077 477 283 7 46 chr13 64523916 64524068 -55760244 - B1F1 SINE Alu -3 146 1 7 1077 658 178 0 37 chr13 64524269 64524456 -55759856 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 1077 994 232 63 49 chr13 64524456 64524742 -55759570 - B4 SINE B4 0 292 3 8 1077 344 225 78 11 chr13 64524745 64524835 -55759477 - L1MB4 LINE L1 -6423 184 89 8 1077 226 296 24 36 chr13 64525244 64525328 -55758984 - B1F SINE Alu 0 149 67 8 1077 399 284 105 26 chr13 64525387 64525539 -55758773 - RSINE1 SINE B4 0 165 2 8 1077 668 145 0 9 chr13 64525570 64525681 -55758631 - B1_Mus1 SINE Alu -6 142 33 8 1077 266 304 65 0 chr13 64526164 64526256 -55758056 + LTR41 LTR ERVL 3 100 -668 8 1077 608 137 26 19 chr13 64526302 64526458 -55757854 + (CA)n Simple_repeat Simple_repeat 2 158 0 8 1077 193 151 19 19 chr13 64526530 64526584 -55757728 + (CA)n Simple_repeat Simple_repeat 2 55 0 8 1077 488 149 28 21 chr13 64526614 64526758 -55757554 + (CA)n Simple_repeat Simple_repeat 1 145 0 8 1077 393 171 110 0 chr13 64526910 64526992 -55757320 - MER67B LTR ERV1 0 661 571 8 1077 433 90 22 33 chr13 64527057 64527149 -55757163 + (CA)n Simple_repeat Simple_repeat 1 91 0 9 1077 7752 81 27 1 chr13 64527156 64528249 -55756063 - L1_Mus3 LINE L1 0 6638 5528 9 1077 311 168 34 34 chr13 64528255 64528403 -55755909 + (CA)n Simple_repeat Simple_repeat 2 149 0 9 1077 420 166 25 37 chr13 64528463 64528626 -55755686 + (CATA)n Simple_repeat Simple_repeat 3 163 0 9 1077 2179 95 13 22 chr13 64528679 64528991 -55755321 - RLTR27 LTR ERVK 0 309 1 9 1077 23 0 0 0 chr13 64529057 64529080 -55755232 + AT_rich Low_complexity Low_complexity 1 23 0 9 1077 768 241 125 5 chr13 64529099 64529291 -55755021 - B3 SINE B2 0 216 2 9 1077 351 0 0 0 chr13 64529892 64529931 -55754381 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 9 1077 1376 79 16 11 chr13 64529945 64530136 -55754176 + B2_Mm1t SINE B2 1 192 -1 9 1077 360 250 58 33 chr13 64530136 64530245 -55754067 - B1_Mur1 SINE Alu -34 115 3 9 1077 693 234 14 0 chr13 64530345 64530490 -55753822 - RSINE1 SINE B4 -17 148 2 1 1077 858 144 0 0 chr13 64530493 64530673 -55753639 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1077 237 183 0 0 chr13 64530679 64530739 -55753573 + CT-rich Low_complexity Low_complexity 1 60 0 1 1077 545 267 128 13 chr13 64530978 64531213 -55753099 - Lx9 LINE L1 -56 7588 7327 1 1077 402 167 63 53 chr13 64531213 64531308 -55753004 - PB1D10 SINE Alu -11 106 11 1 1077 2425 122 73 20 chr13 64531424 64531877 -55752435 - RLTR28 LTR ERVL 0 524 48 1 1077 578 204 0 9 chr13 64531975 64532089 -55752223 + B1_Mur1 SINE Alu 24 136 -13 1 1077 182 37 37 0 chr13 64532089 64532116 -55752196 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1077 441 202 16 66 chr13 64532414 64532536 -55751776 - PB1D7 SINE Alu -1 119 4 1 1077 396 246 61 14 chr13 64532752 64532900 -55751412 - L1M2 LINE L1 -820 5492 5338 1 1077 271 372 8 8 chr13 64532939 64533061 -55751251 - ID_B1 SINE B4 -98 126 5 1 1077 1895 127 68 3 chr13 64533136 64533443 -55750869 + ORR1A2 LTR MaLR 1 327 0 1 1077 1127 70 0 13 chr13 64534880 64535039 -55749273 + (TTTC)n Simple_repeat Simple_repeat 4 160 0 1 1077 1096 220 9 5 chr13 64535565 64535780 -55748532 - B3 SINE B2 0 216 1 1 1077 188 79 53 0 chr13 64535791 64535829 -55748483 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 1 1077 1457 70 5 0 chr13 64536048 64536233 -55748079 + B2_Mm1a SINE B2 2 187 -6 1 1077 474 223 10 10 chr13 64536440 64536544 -55747768 + ID_B1 SINE B4 82 185 -39 1 1077 382 248 34 42 chr13 64536544 64536558 -55747754 + PB1D7 SINE Alu 1 117 -3 1 1077 312 27 0 0 chr13 64536668 64536705 -55747607 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1077 1170 62 0 7 chr13 64536705 64536852 -55747460 - B1_Mus1 SINE Alu 0 148 3 1 1077 901 127 239 37 chr13 64541077 64541265 -55743047 - URR1A DNA MER1_type 0 226 1 1 1077 234 283 28 66 chr13 64541430 64541536 -55742776 + ID_B1 SINE B4 78 179 -45 1 1077 424 250 29 0 chr13 64541446 64541550 -55742762 + PB1D7 SINE Alu 9 115 -5 1 1077 233 200 0 32 chr13 64541550 64541612 -55742700 + (TATG)n Simple_repeat Simple_repeat 3 62 0 1 1077 305 286 112 0 chr13 64542270 64542368 -55741944 - ID_B1 SINE B4 -34 190 82 1 1077 515 267 153 11 chr13 64542614 64542803 -55741509 - ID_B1 SINE B4 -8 216 1 1 1077 216 311 78 0 chr13 64542803 64542906 -55741406 - PB1D10 SINE Alu -6 111 1 1 1077 1399 6 0 27 chr13 64543699 64543884 -55740428 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1077 391 113 14 14 chr13 64543978 64544050 -55740262 + (GGA)n Simple_repeat Simple_repeat 3 74 0 1 1077 318 282 82 34 chr13 64544210 64544252 -55740060 - RMER15 LTR ERVL 0 575 530 1 1077 1183 48 14 0 chr13 64544252 64544397 -55739915 + B1_Mus2 SINE Alu 1 147 0 1 1077 318 252 467 34 chr13 64544397 64544561 -55739751 - RMER15 LTR ERVL -46 529 296 1 1077 560 215 36 54 chr13 64544551 64544718 -55739594 - RMER15 LTR ERVL -390 185 22 1 1077 420 203 216 23 chr13 64545450 64545606 -55738706 - B3 SINE B2 -4 212 13 1 1077 605 252 7 20 chr13 64546021 64546171 -55738141 + ID_B1 SINE B4 1 148 -76 1 1077 348 222 140 10 chr13 64546108 64546208 -55738104 + PB1D10 SINE Alu 5 117 0 1 1077 880 245 10 5 chr13 64546410 64546619 -55737693 - B3 SINE B2 -6 210 1 1 1077 424 143 39 0 chr13 64546641 64546718 -55737594 - PB1D7 SINE Alu -5 115 36 1 1077 184 300 60 36 chr13 64546762 64546845 -55737467 - L2b LINE L2 -52 3323 3239 1 1077 443 218 0 0 chr13 64547252 64547330 -55736982 - ID4 SINE ID -2 81 4 1 1077 255 61 0 0 chr13 64547437 64547470 -55736842 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1077 449 250 124 8 chr13 64547807 64547936 -55736376 + B1F2 SINE Alu 4 147 -2 1 1077 757 229 52 10 chr13 64548050 64548244 -55736068 + L1M2 LINE L1 4430 4631 -1512 1 1077 382 268 98 0 chr13 64548252 64548364 -55735948 + RSINE1 SINE B4 4 126 -39 1 1077 708 207 14 0 chr13 64548467 64548612 -55735700 - B1_Mur2 SINE Alu -1 148 2 1 1077 569 287 28 7 chr13 64548671 64548815 -55735497 + B1F SINE Alu 1 147 -2 1 1077 611 297 91 1 chr13 64548854 64549276 -55735036 + L1M2 LINE L1 4963 5437 -860 1 1077 610 122 0 18 chr13 64549650 64549759 -55734553 + (TCC)n Simple_repeat Simple_repeat 3 109 0 1 1077 832 261 9 18 chr13 64549765 64549991 -55734321 - ID_B1 SINE B4 0 224 1 1 1077 322 325 132 50 chr13 64551086 64551306 -55733006 + B4A SINE B4 2 239 -53 1 1077 228 184 0 0 chr13 64552642 64552691 -55731621 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1077 296 156 0 0 chr13 64552699 64552753 -55731559 - B1_Mur2 SINE Alu -5 145 92 1 1077 454 214 0 12 chr13 64552809 64552894 -55731418 - B1_Mur3 SINE Alu -60 89 6 1 1077 8278 50 5 0 chr13 64552967 64554593 -55729719 - L1Md_F2 LINE L1 -13 6569 4933 1 1077 1295 113 16 0 chr13 64555190 64555375 -55728937 + B2_Mm2 SINE B2 2 189 -6 1 1077 1715 29 0 5 chr13 64555486 64555696 -55728616 - L1Md_F2 LINE L1 -1 6581 6373 1 1077 457 94 12 12 chr13 64557734 64557820 -55726492 + (TG)n Simple_repeat Simple_repeat 2 87 0 1 1077 192 200 0 0 chr13 64560154 64560194 -55724118 + (CCG)n Simple_repeat Simple_repeat 3 42 0 1 1077 737 122 53 15 chr13 64560439 64560572 -55723740 + ORR1C1 LTR MaLR 233 370 -8 1 1077 1401 70 11 0 chr13 64561659 64561844 -55722468 + B2_Mm1t SINE B2 4 190 -3 1 1077 195 100 0 0 chr13 64562074 64562104 -55722208 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1 1077 1196 215 0 5 chr13 64562116 64562331 -55721981 - B3 SINE B2 -2 214 1 1 1077 21 0 0 0 chr13 64562411 64562432 -55721880 + AT_rich Low_complexity Low_complexity 1 21 0 1 1077 192 77 0 0 chr13 64562628 64562654 -55721658 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 1 1077 679 171 0 65 chr13 64562689 64562827 -55721485 - B3 SINE B2 -86 130 2 1 1077 488 247 6 93 chr13 64562868 64563029 -55721283 - B1F SINE Alu -1 148 2 1 1077 691 260 58 19 chr13 64563303 64563511 -55720801 - ID_B1 SINE B4 -1 223 8 1 1077 736 129 0 22 chr13 64563642 64563777 -55720535 + CT-rich Low_complexity Low_complexity 3 134 0 1 1077 21 0 0 0 chr13 64564740 64564761 -55719551 + AT_rich Low_complexity Low_complexity 1 21 0 1 1077 1009 280 123 14 chr13 64564930 64565288 -55719024 - Lx8 LINE L1 -30 7443 7047 1 1077 562 262 21 14 chr13 64565467 64565610 -55718702 + ID_B1 SINE B4 81 224 0 1 1077 228 111 56 0 chr13 64565610 64565800 -55718512 + (CA)n Simple_repeat Simple_repeat 1 200 0 1 1077 359 144 57 25 chr13 64565912 64566069 -55718243 + (CA)n Simple_repeat Simple_repeat 2 163 0 1 1077 246 167 40 40 chr13 64566128 64566380 -55717932 + (CA)n Simple_repeat Simple_repeat 1 252 0 1 1077 342 0 0 0 chr13 64566918 64566956 -55717356 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 1 1077 360 0 0 0 chr13 64567089 64567129 -55717183 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1077 269 281 176 35 chr13 64567177 64567347 -55716965 - B4A SINE B4 -98 194 1 1 1077 24 77 0 0 chr13 64567601 64567653 -55716659 + AT_rich Low_complexity Low_complexity 1 52 0 1 1077 1147 76 7 0 chr13 64567654 64567799 -55716513 - B1_Mm SINE Alu -1 146 1 1 1077 808 143 50 0 chr13 64567865 64568005 -55716307 - B1_Mur3 SINE Alu -2 147 1 1 1077 811 278 38 0 chr13 64568114 64568326 -55715986 - ID_B1 SINE B4 -1 223 4 1 1077 459 0 0 0 chr13 64569065 64569116 -55715196 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1077 1264 253 96 0 chr13 64569368 64569700 -55714612 - MTE2b LTR MaLR -11 368 5 1 1077 1282 207 129 30 chr13 64569899 64570233 -55714079 - ORR1D2 LTR MaLR 0 370 4 1 1077 1076 132 189 0 chr13 64570826 64571016 -55713296 + URR1A DNA MER1_type 1 226 0 1 1077 258 376 0 0 chr13 64571207 64571308 -55713004 + U6 snRNA snRNA 7 107 0 1 1077 911 203 47 26 chr13 64571381 64571573 -55712739 - B3A SINE B2 0 198 3 1 1077 1232 238 7 47 chr13 64571843 64572139 -55712173 + B4A SINE B4 3 286 -6 1 1077 673 201 0 14 chr13 64572168 64572453 -55711859 + (CA)n Simple_repeat Simple_repeat 1 280 0 1 1077 523 237 18 95 chr13 64573890 64574085 -55710227 + B4A SINE B4 2 173 -51 1 1077 228 302 63 0 chr13 64574142 64574205 -55710107 + RSINE1 SINE B4 83 149 -16 1 1077 623 13 13 0 chr13 64574219 64574295 -55710017 + (TATG)n Simple_repeat Simple_repeat 2 78 0 1 1077 589 168 136 8 chr13 64574379 64574511 -55709801 + B1_Mur2 SINE Alu 1 149 0 1 1077 1200 65 92 17 chr13 64574616 64574789 -55709523 - B2_Mm1a SINE B2 -7 186 1 1 1077 21 57 0 0 chr13 64574917 64574952 -55709360 + AT_rich Low_complexity Low_complexity 1 35 0 1 1077 824 180 62 6 chr13 64574952 64575131 -55709181 - B3 SINE B2 -2 214 26 1 1077 377 259 0 44 chr13 64575444 64575557 -55708755 + RSINE1 SINE B4 16 123 -42 1 1077 189 0 0 0 chr13 64575589 64575610 -55708702 + (AGGGGG)n Simple_repeat Simple_repeat 3 23 0 1 1077 361 277 35 55 chr13 64575632 64575777 -55708535 - ORR1E LTR MaLR -217 142 1 1 1077 339 206 148 4 chr13 64575777 64575893 -55708419 - MIRb SINE MIR -129 139 4 1 1077 891 256 14 0 chr13 64576157 64576368 -55707944 - ID_B1 SINE B4 -2 222 9 1 1077 59 38 0 0 chr13 64577947 64578027 -55706285 + AT_rich Low_complexity Low_complexity 1 80 0 1 1077 955 224 57 46 chr13 64578041 64578322 -55705990 + B4 SINE B4 2 285 -7 1 1077 548 227 42 0 chr13 64578591 64578666 -55705646 + ID SINE ID 2 81 -143 1 1077 276 341 0 23 chr13 64578666 64578753 -55705559 + PB1D10 SINE Alu 1 85 -32 2 1077 244 247 192 20 chr13 64578809 64578908 -55705404 + PB1D10 SINE Alu 1 116 -1 2 1077 272 273 13 25 chr13 64583371 64583450 -55700862 + L1M5 LINE L1 4561 4638 -1508 2 1077 451 288 0 9 chr13 64583460 64583565 -55700747 + PB1 SINE Alu 20 123 -4 2 1077 311 257 40 37 chr13 64583576 64583734 -55700578 + L1MD LINE L1 4650 4808 -1338 2 1077 961 190 22 54 chr13 64583793 64584016 -55700296 + B3 SINE B2 1 216 0 2 1077 28 0 0 0 chr13 64584304 64584332 -55699980 + AT_rich Low_complexity Low_complexity 1 28 0 2 1077 228 100 0 0 chr13 64584332 64584362 -55699950 - L1MD2 LINE L1 -6085 462 433 2 1077 273 98 0 0 chr13 64584363 64584404 -55699908 + (TTA)n Simple_repeat Simple_repeat 2 42 0 2 1077 267 206 62 16 chr13 64584407 64584471 -55699841 - RSINE1 SINE B4 -17 148 82 2 1077 473 0 18 0 chr13 64584993 64585050 -55699262 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 2 1077 205 171 0 0 chr13 64585050 64585085 -55699227 + (TCTG)n Simple_repeat Simple_repeat 3 37 0 2 1077 700 229 14 0 chr13 64585499 64585639 -55698673 - ID_B1 SINE B4 -3 221 80 2 1077 38 0 0 0 chr13 64585667 64585705 -55698607 + AT_rich Low_complexity Low_complexity 1 38 0 2 1077 605 273 0 36 chr13 64585723 64585890 -55698422 - RSINE1 SINE B4 -2 163 3 2 1077 1189 122 26 11 chr13 64586239 64586430 -55697882 - B2_Mm2 SINE B2 0 195 2 2 1077 601 207 59 13 chr13 64586535 64586687 -55697625 - ID_B1 SINE B4 -65 159 1 2 1077 300 341 132 7 chr13 64586709 64587019 -55697293 + MER74B LTR ERVL 200 548 -74 2 1077 378 0 0 0 chr13 64587743 64587785 -55696527 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1077 400 304 87 16 chr13 64587830 64587957 -55696355 - B4A SINE B4 -75 217 82 2 1077 1181 44 0 0 chr13 64587976 64588113 -55696199 - B1_Mus1 SINE Alu -11 137 1 2 1077 234 313 3 0 chr13 64588654 64588731 -55695581 - MIRc SINE MIR -50 158 81 2 1077 23 0 0 0 chr13 64588965 64588988 -55695324 + AT_rich Low_complexity Low_complexity 1 23 0 2 1077 237 316 39 13 chr13 64589482 64589559 -55694753 + B4 SINE B4 2 80 -212 2 1077 251 200 0 0 chr13 64589682 64589727 -55694585 + RSINE1 SINE B4 78 122 -43 2 1077 991 289 28 11 chr13 64590378 64590661 -55693651 + ORR1E LTR MaLR 67 354 -5 2 1077 439 313 105 38 chr13 64591752 64591961 -55692351 + ID_B1 SINE B4 2 224 0 2 1077 3517 55 0 18 chr13 64592506 64592946 -55691366 - L1_Mus1 LINE L1 -2 6565 6134 2 1077 213 121 0 0 chr13 64593126 64593159 -55691153 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2 1077 355 294 180 16 chr13 64593170 64593298 -55691014 - RSINE1 SINE B4 -16 149 1 2 1077 180 0 0 0 chr13 64593385 64593405 -55690907 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 1077 283 260 39 13 chr13 64593477 64593555 -55690757 + PB1D7 SINE Alu 25 104 -16 2 1077 369 252 26 17 chr13 64593589 64593706 -55690606 + L1MC4 LINE L1 7781 7898 -144 2 1077 478 348 12 12 chr13 64593924 64594087 -55690225 + RSINE1 SINE B4 2 164 -1 2 1077 22 0 0 0 chr13 64594096 64594118 -55690194 + AT_rich Low_complexity Low_complexity 1 22 0 2 1077 201 39 0 0 chr13 64594305 64594331 -55689981 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 2 1077 1235 108 17 0 chr13 64594401 64594577 -55689735 + B2_Mm1t SINE B2 1 179 -14 2 1077 262 164 0 52 chr13 64594680 64594738 -55689574 + B2_Mm2 SINE B2 47 101 -94 2 1077 21 57 0 0 chr13 64594745 64594780 -55689532 + AT_rich Low_complexity Low_complexity 1 35 0 2 1077 180 179 0 0 chr13 64595473 64595512 -55688800 + (CCCA)n Simple_repeat Simple_repeat 3 41 0 2 1077 257 105 0 50 chr13 64595531 64595591 -55688721 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 2 1077 848 217 51 139 chr13 64595601 64595976 -55688336 + L1MC4a LINE L1 7541 7882 0 2 1077 299 85 21 0 chr13 64596510 64596557 -55687755 + (TA)n Simple_repeat Simple_repeat 1 48 0 2 1077 245 269 49 37 chr13 64596562 64596643 -55687669 - MER102b DNA MER1_type -230 111 30 2 1077 340 272 10 52 chr13 64596896 64596993 -55687319 + B4 SINE B4 1 93 -199 2 1077 697 257 111 46 chr13 64597003 64597264 -55687048 + B4A SINE B4 1 278 -14 2 1077 894 98 0 0 chr13 64597269 64597422 -55686890 + (CA)n Simple_repeat Simple_repeat 2 154 0 2 1077 531 0 0 0 chr13 64597422 64597480 -55686832 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1077 242 174 0 21 chr13 64597484 64597531 -55686781 - ID SINE ID -174 50 5 2 1077 251 54 27 0 chr13 64597678 64597715 -55686597 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1077 429 70 0 0 chr13 64597848 64597905 -55686407 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1077 450 254 88 34 chr13 64598032 64598179 -55686133 - ID_B1 SINE B4 0 224 70 2 1077 3533 33 53 40 chr13 64599806 64600275 -55684037 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1077 6567 56 12 10 chr13 64600277 64601104 -55683208 - IAPEz-int LTR ERVK -2 6479 5651 2 1077 2677 79 0 3 chr13 64601097 64601440 -55682872 - IAPEz-int LTR ERVK -4781 1700 1359 2 1077 3197 49 29 22 chr13 64601440 64601854 -55682458 - IAPEz-int LTR ERVK -5819 662 246 2 1077 514 102 76 182 chr13 64601847 64601979 -55682333 - IAPEz-int LTR ERVK -6355 126 9 2 1077 3533 33 53 40 chr13 64601980 64602449 -55681863 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1077 268 165 48 40 chr13 64602666 64602792 -55681520 + CT-rich Low_complexity Low_complexity 3 129 0 2 1077 689 270 101 10 chr13 64603022 64603220 -55681092 - B3 SINE B2 0 216 1 2 1077 343 275 0 0 chr13 64603967 64604036 -55680276 - ID4_ SINE ID -13 70 2 2 1077 302 209 130 28 chr13 64604036 64604144 -55680168 - L1M4 LINE L1 -390 5784 5666 2 1077 1333 66 43 21 chr13 64604791 64604978 -55679334 + B2_Mm1a SINE B2 1 191 -2 2 1077 685 195 0 15 chr13 64605142 64605272 -55679040 - B1_Mur3 SINE Alu -19 130 3 2 1077 513 275 6 70 chr13 64605706 64605878 -55678434 - B3A SINE B2 0 198 38 2 1077 373 127 0 0 chr13 64605878 64605933 -55678379 - Lx5 LINE L1 -267 6783 6729 2 1077 1082 202 35 35 chr13 64606345 64606632 -55677680 - Lx3C LINE L1 0 6976 6690 2 1077 198 0 0 0 chr13 64607613 64607635 -55676677 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2 1077 300 133 0 0 chr13 64607729 64607774 -55676538 + L1M6 LINE L1 1512 1556 -4940 2 1077 1089 239 83 35 chr13 64607793 64608131 -55676181 + ORR1E LTR MaLR 1 354 -5 2 1077 376 207 11 44 chr13 64608583 64608765 -55675547 + GA-rich Low_complexity Low_complexity 4 179 0 2 1077 334 242 0 0 chr13 64608933 64608995 -55675317 - B1_Mur3 SINE Alu -87 62 1 2 1077 180 77 0 0 chr13 64609854 64609880 -55674432 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 2 1077 1940 144 3 3 chr13 64610322 64610643 -55673669 + MT2B2 LTR ERVL 185 505 -79 2 1077 635 152 37 29 chr13 64612431 64612638 -55671674 + Lx3C LINE L1 6760 7000 0 2 1077 1706 131 67 103 chr13 64613483 64613824 -55670488 + ORR1A4 LTR MaLR 1 329 0 2 1077 213 114 0 0 chr13 64613824 64613853 -55670459 + (TGGGGG)n Simple_repeat Simple_repeat 5 33 0 2 1077 1112 268 88 24 chr13 64614119 64614263 -55670049 + L1MB3 LINE L1 5691 5855 -328 2 1077 3472 192 62 30 chr13 64614263 64614957 -55669355 - RMER6D LTR ERVK -4 716 1 2 1077 1112 268 88 24 chr13 64614957 64615233 -55669079 + L1MB3 LINE L1 5856 6137 -46 2 1077 1143 271 96 18 chr13 64615306 64615693 -55668619 + MTD LTR MaLR 3 419 0 2 1077 2236 80 43 40 chr13 64616080 64616404 -55667908 - L1Md_F2 LINE L1 -2 6580 6256 2 1077 395 211 108 23 chr13 64617164 64617391 -55666921 - L1M5 LINE L1 -700 5464 5204 2 1077 1716 139 130 0 chr13 64617608 64617931 -55666381 + RLTR40 LTR ERVK 7 371 -446 2 134 5735 42 0 24 chr13 64617936 64618614 -55665698 - L1Md_T LINE L1 0 6582 5921 2 1078 814 261 107 66 chr13 64618631 64618996 -55665316 - RLTR14 LTR ERV1 0 382 3 2 1078 554 283 62 23 chr13 64619187 64619364 -55664948 - RLTR14-int LTR ERV1 -161 5156 4973 2 1078 1136 167 126 217 chr13 64619986 64620437 -55663875 + RLTR40 LTR ERVK 388 797 -20 2 1078 241 175 31 16 chr13 64620514 64620578 -55663734 + T-rich Low_complexity Low_complexity 3 67 0 2 1078 1032 316 143 4 chr13 64620628 64620709 -55663603 - Lx8 LINE L1 -20 7453 7349 2 1078 934 159 28 0 chr13 64620709 64620854 -55663458 - B1_Mur1 SINE Alu 0 149 1 2 1078 1032 316 143 4 chr13 64620854 64621267 -55663045 - Lx8 LINE L1 -125 7348 6890 2 1078 1038 295 40 23 chr13 64621929 64622279 -55662033 + MTE2b LTR MaLR 1 356 -23 2 1078 416 299 19 58 chr13 64622610 64622766 -55661546 + RSINE1 SINE B4 2 151 -14 2 1078 556 246 292 0 chr13 64622820 64622991 -55661321 - ID_B1 SINE B4 0 224 4 2 1078 437 199 7 0 chr13 64623299 64623450 -55660862 + (TG)n Simple_repeat Simple_repeat 2 153 0 2 1078 234 268 0 58 chr13 64623450 64623537 -55660775 + L1MA7 LINE L1 6061 6142 -149 2 1078 261 0 0 0 chr13 64623560 64623589 -55660723 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1078 249 347 27 0 chr13 64623637 64623659 -55660653 - PB1D10 SINE Alu -7 110 34 2 1078 277 245 0 0 chr13 64623659 64623712 -55660600 - ID_B1 SINE B4 -57 167 115 2 1078 28 29 0 0 chr13 64623729 64623764 -55660548 + AT_rich Low_complexity Low_complexity 1 35 0 2 1078 1303 92 54 5 chr13 64624263 64624448 -55659864 + B2_Mm2 SINE B2 2 195 0 2 1078 2432 63 0 13 chr13 64624702 64625006 -55659306 - L1_Mus2 LINE L1 0 6566 6267 2 1078 243 88 0 0 chr13 64625127 64625161 -55659151 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1078 1110 205 75 0 chr13 64625481 64625681 -55658631 - B3 SINE B2 0 216 2 2 1078 553 234 172 0 chr13 64625696 64625897 -55658415 - MT2A LTR ERVL -41 560 196 2 1078 806 142 8 8 chr13 64625913 64626041 -55658271 - MT2A LTR ERVL -405 128 1 2 1078 546 256 73 78 chr13 64626108 64626299 -55658013 + B3A SINE B2 9 198 0 2 1078 243 381 63 19 chr13 64626314 64626472 -55657840 + Charlie2a DNA MER1_type 144 308 -2553 2 1078 706 333 58 21 chr13 64626586 64627065 -55657247 + Charlie2a DNA MER1_type 2345 2841 -20 2 1078 458 298 86 48 chr13 64627402 64627670 -55656642 + RMER2 LTR ERV1 290 567 0 3 1078 211 182 0 0 chr13 64627837 64627870 -55656442 + (CGTG)n Simple_repeat Simple_repeat 4 36 0 3 1078 796 260 75 46 chr13 64627870 64628152 -55656160 - B4A SINE B4 -1 291 2 3 1078 812 232 26 13 chr13 64629169 64629322 -55654990 + RSINE1 SINE B4 3 157 -8 3 1078 616 259 15 0 chr13 64629387 64629518 -55654794 + B1_Mur2 SINE Alu 2 134 -15 3 1078 24 32 0 0 chr13 64629663 64629694 -55654618 + AT_rich Low_complexity Low_complexity 1 31 0 3 1078 339 284 55 9 chr13 64630378 64630488 -55653824 + MLT1A1 LTR MaLR 294 408 0 3 1078 400 235 161 36 chr13 64630939 64631076 -55653236 - MER20 DNA MER1_type -59 160 7 3 1078 276 288 0 0 chr13 64631897 64631963 -55652349 + B3A SINE B2 94 159 -39 3 1078 383 38 19 0 chr13 64631989 64632042 -55652270 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1078 688 196 92 59 chr13 64632183 64632335 -55651977 + B3A SINE B2 3 159 -39 3 1078 425 240 76 9 chr13 64632740 64632845 -55651467 + PB1D7 SINE Alu 5 116 -4 3 1078 29 0 0 0 chr13 64632868 64632897 -55651415 + AT_rich Low_complexity Low_complexity 1 29 0 3 1078 921 217 91 5 chr13 64632944 64633143 -55651169 - B3 SINE B2 0 216 1 3 1078 261 276 138 0 chr13 64633210 64633297 -55651015 - MER5B DNA MER1_type -79 99 1 3 1078 781 273 34 37 chr13 64634658 64634907 -55649405 - MTD LTR MaLR -162 257 8 3 1078 22 35 0 0 chr13 64635191 64635220 -55649092 + AT_rich Low_complexity Low_complexity 1 29 0 3 1078 280 225 52 12 chr13 64635992 64636104 -55648208 + Lx5 LINE L1 5680 5791 -377 3 1078 802 263 259 0 chr13 64636146 64636378 -55647934 - B4A SINE B4 0 292 1 3 1078 862 324 39 25 chr13 64636422 64636704 -55647608 - B4A SINE B4 -6 286 1 3 1078 7000 131 29 21 chr13 64637039 64638203 -55646109 + L1_Mur2 LINE L1 4308 5480 -397 3 1078 5579 207 51 13 chr13 64638199 64639361 -55644951 + Lx5 LINE L1 5845 7050 0 3 1078 332 321 146 18 chr13 64639440 64639776 -55644536 - L1MCb LINE L1 -5316 729 351 3 1078 976 277 116 8 chr13 64640114 64640365 -55643947 - B4A SINE B4 -14 278 1 3 1078 1142 102 0 26 chr13 64640835 64640986 -55643326 - B1_Mus2 SINE Alu 0 147 1 3 1078 40388 27 3 6 chr13 64641201 64647461 -55636851 - L1Md_T LINE L1 0 6582 383 3 1078 426 236 34 0 chr13 64648430 64648519 -55635793 + B1F SINE Alu 36 127 -22 3 1078 325 197 78 13 chr13 64648547 64648624 -55635688 + ID4_ SINE ID 2 83 0 3 1078 1410 95 0 26 chr13 64648962 64649156 -55635156 + B2_Mm2 SINE B2 2 190 -5 3 1078 450 0 0 0 chr13 64649203 64649253 -55635059 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 3 1078 326 200 0 0 chr13 64649353 64649413 -55634899 - B4 SINE B4 -232 60 1 3 1078 1140 243 104 39 chr13 64650085 64650440 -55633872 - MTE2a LTR MaLR -1 378 1 3 1078 2045 57 4 26 chr13 64650501 64650771 -55633541 - L1_Mus2 LINE L1 0 6566 6303 3 1078 279 215 0 0 chr13 64651350 64651415 -55632897 + CT-rich Low_complexity Low_complexity 4 68 0 3 1078 423 0 0 0 chr13 64651448 64651495 -55632817 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1078 3563 54 0 2 chr13 64652393 64652801 -55631511 - MTB_Mm LTR MaLR 0 407 1 3 1078 461 304 35 96 chr13 64653603 64653822 -55630490 - RMER15 LTR ERVL 0 575 116 3 1078 432 336 71 21 chr13 64653822 64653962 -55630350 + B3A SINE B2 50 196 -2 3 1078 461 304 35 96 chr13 64653962 64653988 -55630324 - RMER15 LTR ERVL 0 115 58 3 1078 1355 55 0 11 chr13 64654164 64654346 -55629966 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 3 1078 953 127 0 6 chr13 64654354 64654512 -55629800 + (TTCTCC)n Simple_repeat Simple_repeat 1 157 0 3 1078 546 235 0 25 chr13 64654788 64654906 -55629406 - B1_Mus1 SINE Alu -23 125 11 3 1078 477 0 0 0 chr13 64654910 64654963 -55629349 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 3 1078 522 0 0 0 chr13 64655042 64655100 -55629212 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 3 1078 7504 53 3 2 chr13 64656009 64656933 -55627379 + L1_Mus1 LINE L1 5672 6567 0 3 1078 1478 78 10 10 chr13 64657213 64657406 -55626906 - B2_Mm1t SINE B2 0 193 1 3 1078 486 0 0 0 chr13 64657719 64657773 -55626539 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1078 960 262 63 12 chr13 64657773 64658028 -55626284 - B4A SINE B4 -23 269 2 3 1078 1067 228 5 24 chr13 64659051 64659258 -55625054 + B3 SINE B2 1 203 -13 3 1078 2713 83 74 8 chr13 64659317 64659695 -55624617 - RLTR9D LTR ERVK 0 403 1 3 1078 1140 270 50 28 chr13 64659723 64660119 -55624193 - L1MA5 LINE L1 -453 5847 5443 3 1078 411 279 205 0 chr13 64660140 64660262 -55624050 - ID_B1 SINE B4 -75 149 3 3 1078 28 48 0 0 chr13 64660287 64660329 -55623983 + AT_rich Low_complexity Low_complexity 1 42 0 3 1078 226 275 12 138 chr13 64660896 64660976 -55623336 - RSINE1 SINE B4 0 165 96 3 1078 278 335 125 77 chr13 64660943 64661111 -55623201 - B4 SINE B4 -18 274 99 3 1078 557 55 0 0 chr13 64661101 64661174 -55623138 - 4.5SRNA scRNA scRNA -5 89 17 3 1078 1501 52 0 30 chr13 64661176 64661373 -55622939 + L1Md_F2 LINE L1 6391 6581 -1 3 1078 369 310 42 25 chr13 64661402 64661521 -55622791 - B4A SINE B4 -169 123 3 3 1078 239 133 22 0 chr13 64662312 64662357 -55621955 + GA-rich Low_complexity Low_complexity 1 46 0 3 1078 1047 135 53 16 chr13 64662621 64662808 -55621504 + RMER4A LTR ERVK 1 196 -389 3 1078 3236 72 12 14 chr13 64662808 64663228 -55621084 + BGLII LTR ERVK 3 421 0 3 1078 859 281 60 65 chr13 64663228 64663252 -55621060 + RMER4A LTR ERVK 197 231 -354 3 1078 1163 107 0 6 chr13 64663252 64663431 -55620881 + (GAA)n Simple_repeat Simple_repeat 1 178 0 3 1078 4732 105 45 14 chr13 64663434 64664127 -55620185 - RLTR19B LTR ERVK 0 715 2 3 1078 859 281 60 65 chr13 64664127 64664242 -55620070 + RMER4A LTR ERVK 232 334 -251 3 1078 1224 101 0 0 chr13 64664242 64664420 -55619892 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 3 1078 859 281 60 65 chr13 64664420 64664665 -55619647 + RMER4A LTR ERVK 335 579 -6 3 1078 1179 249 38 55 chr13 64664757 64665162 -55619150 + MTE2a LTR MaLR 10 419 0 3 1078 3142 159 79 43 chr13 64665215 64665821 -55618491 + RLTR5_Mm LTR ERV1 1 628 0 3 1078 198 0 0 0 chr13 64666610 64666632 -55617680 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1078 1395 59 0 36 chr13 64667539 64667732 -55616580 + L1_Mus1 LINE L1 6382 6567 0 3 1078 398 315 73 27 chr13 64668005 64668155 -55616157 + MLT1E3 LTR MaLR 434 590 -34 3 1078 212 284 14 56 chr13 64669034 64669105 -55615207 - B1_Mus2 SINE Alu -79 68 1 3 1078 526 243 65 22 chr13 64669105 64669181 -55615131 - ID SINE ID -138 86 5 3 1078 1485 235 91 53 chr13 64669469 64669955 -55614357 - LTR69 LTR ERVL -84 504 1 3 1078 300 312 84 33 chr13 64669966 64670181 -55614131 - HAL1 LINE L1 -287 2220 1995 3 1078 292 303 111 41 chr13 64670240 64670412 -55613900 - LTR16E1 LTR ERVL -52 486 303 3 1078 220 310 64 100 chr13 64670527 64670667 -55613645 - RSINE1 SINE B4 -29 136 2 3 1078 301 248 324 0 chr13 64670964 64671022 -55613290 - B3A SINE B2 -53 145 54 3 1078 3466 63 55 2 chr13 64671022 64671480 -55612832 + RLTR45 LTR ERVK 1 482 0 3 1078 301 248 324 0 chr13 64671480 64671526 -55612786 - B3A SINE B2 -145 53 8 3 1078 947 301 126 31 chr13 64671775 64672058 -55612254 - L1MB7 LINE L1 -10 6174 5872 3 1078 940 143 31 67 chr13 64672058 64672253 -55612059 - B2_Mm2 SINE B2 -7 188 1 3 1078 947 298 88 23 chr13 64672253 64672864 -55611448 - L1MB7 LINE L1 -313 5871 5204 3 1078 442 227 176 7 chr13 64672894 64673036 -55611276 - B3A SINE B2 -30 168 3 3 1078 237 198 70 40 chr13 64673048 64673148 -55611164 - L1MB7 LINE L1 -955 5191 5089 3 1078 791 286 95 0 chr13 64673154 64673521 -55610791 + L1MA4A LINE L1 5526 5927 -376 3 1078 25 51 0 0 chr13 64673634 64673673 -55610639 + AT_rich Low_complexity Low_complexity 1 39 0 3 1078 225 240 0 0 chr13 64673826 64673901 -55610411 - L1M2a LINE L1 -5141 2027 1953 3 1078 235 316 0 10 chr13 64674157 64674256 -55610056 + A-rich Low_complexity Low_complexity 3 100 0 3 1078 418 271 21 0 chr13 64674351 64674447 -55609865 + B3A SINE B2 1 98 -100 3 1078 867 227 20 44 chr13 64674499 64674702 -55609610 + B3A SINE B2 1 198 0 3 1078 228 208 0 36 chr13 64674750 64674805 -55609507 + A-rich Low_complexity Low_complexity 5 57 0 3 1078 201 74 0 0 chr13 64674880 64674907 -55609405 + (TA)n Simple_repeat Simple_repeat 2 28 0 3 1078 215 200 0 0 chr13 64674936 64674976 -55609336 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1078 216 0 0 0 chr13 64675020 64675044 -55609268 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1078 180 0 0 0 chr13 64676011 64676031 -55608281 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1078 666 29 400 0 chr13 64676045 64676150 -55608162 - B1_Mm SINE Alu 0 147 1 3 1078 249 152 324 81 chr13 64676216 64676327 -55607985 - B2_Mm2 SINE B2 0 195 58 3 1078 1305 91 11 0 chr13 64676439 64676615 -55607697 - B2_Mm1t SINE B2 -14 179 2 3 1078 3831 197 136 8 chr13 64676959 64677864 -55606448 - RMER1B Other Other -45 1021 1 3 1078 241 208 73 198 chr13 64677978 64678036 -55606276 - B4A SINE B4 -207 85 28 3 1078 1422 39 79 0 chr13 64678036 64678054 -55606258 - B2_Mm1a SINE B2 0 193 176 3 1078 567 0 0 0 chr13 64678054 64678117 -55606195 + (TTTA)n Simple_repeat Simple_repeat 3 65 0 3 1078 1422 39 79 0 chr13 64678117 64678276 -55606036 - B2_Mm1a SINE B2 -18 175 3 3 1078 241 208 73 198 chr13 64678276 64678313 -55605999 - B4A SINE B4 -265 27 2 3 1078 576 0 0 0 chr13 64678371 64678435 -55605877 + (TC)n Simple_repeat Simple_repeat 1 64 0 3 1078 885 62 8 0 chr13 64678764 64678894 -55605418 - MusHAL1 LINE L1 -147 2565 2435 3 1078 621 0 0 0 chr13 64678926 64678995 -55605317 + (GA)n Simple_repeat Simple_repeat 1 69 0 3 1078 213 136 68 0 chr13 64679002 64679046 -55605266 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 3 1078 314 231 82 71 chr13 64679120 64679316 -55604996 - Lx9 LINE L1 -3 7641 7444 3 1078 207 0 0 0 chr13 64679317 64679340 -55604972 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1078 847 55 0 0 chr13 64679340 64679449 -55604863 - B1_Mus2 SINE Alu 0 147 39 4 1078 313 197 77 26 chr13 64679383 64679461 -55604851 - RLTR25B LTR ERVK -519 509 428 4 1078 3587 264 77 32 chr13 64679470 64681867 -55602445 - Lx9 LINE L1 -209 7435 4723 3 1078 24 0 0 0 chr13 64682041 64682065 -55602247 + AT_rich Low_complexity Low_complexity 1 24 0 4 1078 1035 320 56 8 chr13 64682481 64682837 -55601475 + MER70A LTR ERVL 79 451 -21 4 1078 841 291 78 3 chr13 64682922 64683242 -55601070 + Lx8 LINE L1 6814 7157 -316 4 1078 345 298 140 0 chr13 64683270 64683441 -55600871 + Lx8 LINE L1 7205 7399 -74 4 1078 26 30 0 0 chr13 64683497 64683530 -55600782 + AT_rich Low_complexity Low_complexity 1 33 0 4 1078 321 26 0 0 chr13 64683694 64683732 -55600580 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1078 468 289 26 66 chr13 64683789 64683941 -55600371 - RSINE1 SINE B4 -16 149 4 4 1078 39120 13 1 6 chr13 64683962 64690764 -55593548 - L1Md_A LINE L1 0 6582 1 4 1078 327 248 27 27 chr13 64690922 64691034 -55593278 + MTE2a LTR MaLR 6 117 -302 4 1078 463 255 0 0 chr13 64691039 64691132 -55593180 + MTE2a LTR MaLR 250 342 -37 4 1078 359 151 116 0 chr13 64691132 64691218 -55593094 - MT2A LTR ERVL -1 532 437 4 1078 992 207 41 5 chr13 64691215 64691409 -55592903 - MT2A LTR ERVL -332 201 1 4 1078 515 259 7 0 chr13 64691603 64691742 -55592570 - L1MA4 LINE L1 -366 5934 5795 4 1078 435 193 0 0 chr13 64691777 64691865 -55592447 + (TA)n Simple_repeat Simple_repeat 2 89 0 4 1078 268 279 38 0 chr13 64691865 64691944 -55592368 + B1_Mus1 SINE Alu 10 91 -57 4 1078 459 0 0 0 chr13 64691944 64691995 -55592317 + (CATA)n Simple_repeat Simple_repeat 2 52 0 4 1078 312 158 39 13 chr13 64691995 64692072 -55592240 - Lx4B LINE L1 -18 7040 6962 4 1078 280 306 35 0 chr13 64692076 64692161 -55592151 - B1_Mus2 SINE Alu -57 90 3 4 1078 792 0 0 0 chr13 64692318 64692406 -55591906 + (CAAAC)n Simple_repeat Simple_repeat 2 89 0 4 1078 599 230 40 0 chr13 64693341 64693467 -55590845 - B1F2 SINE Alu -10 139 9 4 1078 837 255 14 41 chr13 64694009 64694230 -55590082 + ID_B1 SINE B4 3 217 -7 4 1078 594 309 131 19 chr13 64694264 64694420 -55589892 + B4A SINE B4 50 227 -65 4 1078 207 0 0 0 chr13 64694420 64694443 -55589869 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 4 1078 594 309 131 19 chr13 64694443 64694500 -55589812 + B4A SINE B4 228 286 -6 4 1078 39 22 0 0 chr13 64694807 64694853 -55589459 + AT_rich Low_complexity Low_complexity 1 46 0 4 1078 1120 264 23 15 chr13 64694879 64695141 -55589171 - MTE2b LTR MaLR -115 264 1 4 1078 602 263 50 96 chr13 64695761 64695959 -55588353 + B3A SINE B2 4 192 -6 4 1078 1192 263 50 0 chr13 64696044 64696322 -55587990 - B4A SINE B4 0 292 1 4 1078 200 345 58 47 chr13 64696884 64697018 -55587294 + MIRb SINE MIR 58 195 -73 4 1078 942 206 13 44 chr13 64697087 64697315 -55586997 - RMER19C LTR ERVK 0 611 391 4 1078 873 180 91 23 chr13 64697286 64697462 -55586850 - RMER19C LTR ERVK -344 558 371 4 1078 423 0 0 0 chr13 64697465 64697512 -55586800 + (TC)n Simple_repeat Simple_repeat 1 47 0 4 1078 419 386 22 11 chr13 64697551 64697818 -55586494 - B4A SINE B4 -19 273 4 4 1078 243 300 0 0 chr13 64698332 64698382 -55585930 + ID4_ SINE ID 34 83 0 4 1078 495 330 45 45 chr13 64699866 64700066 -55584246 + RMER30 DNA MER1_type 2 201 -1 4 1078 722 322 63 48 chr13 64700409 64700807 -55583505 + MLT1C LTR MaLR 61 464 -3 4 1078 1331 250 87 36 chr13 64701394 64701751 -55582561 + ORR1D1 LTR MaLR 5 379 0 4 1078 1089 286 76 14 chr13 64701758 64701835 -55582477 + ORR1D1-int LTR MaLR 14 93 -1487 4 1078 468 0 0 0 chr13 64701835 64701887 -55582425 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 1078 1089 286 76 14 chr13 64701887 64702164 -55582148 + ORR1D1-int LTR MaLR 94 389 -1191 4 1078 969 273 41 11 chr13 64702191 64702461 -55581851 + ORR1D1-int LTR MaLR 449 726 -854 4 1078 362 257 62 27 chr13 64702457 64702569 -55581743 + ORR1D1-int LTR MaLR 1225 1340 -30 4 1078 1771 217 30 14 chr13 64703043 64703407 -55580905 + ORR1D1 LTR MaLR 1 370 -4 4 1078 1039 241 14 23 chr13 64703919 64704140 -55580172 + MTEb LTR MaLR 3 221 -158 4 1078 827 138 12 33 chr13 64704152 64704312 -55580000 + RLTR20A LTR ERVK 1 164 -396 4 1078 684 212 34 7 chr13 64704305 64704452 -55579860 + MTEb LTR MaLR 234 384 0 4 1078 737 196 157 73 chr13 64704501 64704713 -55579599 + RLTR20C LTR ERVK 213 448 -93 4 1078 330 80 0 0 chr13 64704713 64704763 -55579549 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1078 737 192 156 66 chr13 64704763 64704859 -55579453 + RLTR20C LTR ERVK 444 534 0 4 1078 387 299 63 18 chr13 64704859 64704992 -55579320 - ORR1D1 LTR MaLR -46 328 180 4 1078 4889 93 10 0 chr13 64705942 64706852 -55577460 - L1_Mus4 LINE L1 -350 6286 5363 4 1078 2549 79 11 17 chr13 64706852 64707211 -55577101 + Lx LINE L1 6298 6654 0 4 1078 3527 67 2 0 chr13 64707336 64707784 -55576528 + L1_Mus2 LINE L1 6117 6565 -1 4 1078 368 240 30 6 chr13 64707840 64707933 -55576379 + PB1D10 SINE Alu 10 107 -13 4 1078 36523 40 0 3 chr13 64707935 64714170 -55570142 - L1Md_T LINE L1 0 6585 271 4 1078 363 337 100 63 chr13 64714198 64714499 -55569813 + MLT1C LTR MaLR 82 393 -74 4 1078 1708 209 157 14 chr13 64714655 64715169 -55569143 + RMER19A LTR ERVK 1 672 -65 4 1078 10606 109 5 38 chr13 64715170 64717419 -55566893 - L1VL4 LINE L1 -1121 2438 279 4 1078 261 119 0 0 chr13 64717425 64717467 -55566845 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 1078 1077 140 0 0 chr13 64717467 64717645 -55566667 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 4 1078 621 40 0 0 chr13 64717647 64717723 -55566589 + (TTTC)n Simple_repeat Simple_repeat 1 76 0 4 1078 1149 262 41 0 chr13 64717879 64718150 -55566162 - MTEb LTR MaLR 0 379 98 4 1078 974 261 80 115 chr13 64718139 64718512 -55565800 - MTE2a LTR MaLR -8 371 12 4 1078 397 189 5 75 chr13 64718515 64718619 -55565693 - MTEb LTR MaLR -260 119 18 4 1078 27 73 0 0 chr13 64718764 64718819 -55565493 + AT_rich Low_complexity Low_complexity 1 55 0 4 1078 279 250 253 32 chr13 64719244 64719339 -55564973 - PB1D10 SINE Alu 0 117 2 4 1078 189 0 0 0 chr13 64720385 64720406 -55563906 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 1078 705 268 91 26 chr13 64720442 64720707 -55563605 - B4A SINE B4 -10 282 1 4 1078 349 332 91 23 chr13 64720783 64721002 -55563310 + MLT1C LTR MaLR 193 426 -41 4 1078 33 25 0 0 chr13 64721976 64722016 -55562296 + AT_rich Low_complexity Low_complexity 1 40 0 4 1078 552 223 93 46 chr13 64722386 64722602 -55561710 + Lx8 LINE L1 6890 7115 -358 4 1078 380 275 60 74 chr13 64722817 64722966 -55561346 + B4 SINE B4 29 175 -117 4 1078 430 306 48 8 chr13 64723000 64723125 -55561187 + B4 SINE B4 135 264 -28 4 1078 198 0 0 0 chr13 64723126 64723148 -55561164 + (CG)n Simple_repeat Simple_repeat 2 23 0 4 1078 441 0 0 0 chr13 64723148 64723196 -55561116 + (CA)n Simple_repeat Simple_repeat 1 49 0 4 1078 23 54 0 0 chr13 64723552 64723589 -55560723 + AT_rich Low_complexity Low_complexity 1 37 0 4 1078 429 273 178 43 chr13 64724175 64724428 -55559884 + B4A SINE B4 3 289 -3 4 1078 301 211 11 11 chr13 64724438 64724522 -55559790 + (TA)n Simple_repeat Simple_repeat 2 85 0 4 1078 408 20 0 0 chr13 64724522 64724571 -55559741 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1078 301 211 11 11 chr13 64724571 64724577 -55559735 + (TA)n Simple_repeat Simple_repeat 2 7 0 4 1078 1134 255 114 12 chr13 64724589 64725078 -55559234 + L1MB2 LINE L1 5632 6170 -1 4 1078 222 276 114 38 chr13 64725100 64725179 -55559133 + B3 SINE B2 1 85 -131 4 1078 425 59 29 0 chr13 64726322 64726390 -55557922 + (TCTCTG)n Simple_repeat Simple_repeat 3 72 0 4 1078 198 0 0 0 chr13 64726390 64726411 -55557901 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1078 439 340 67 19 chr13 64726481 64726691 -55557621 + MLT1B LTR MaLR 4 223 -167 4 1078 482 192 140 28 chr13 64726692 64726799 -55557513 + B3A SINE B2 1 119 -79 4 1078 1565 120 4 0 chr13 64726847 64727072 -55557240 - MTC LTR MaLR 0 421 196 4 1078 753 160 30 15 chr13 64727112 64727245 -55557067 - B1_Mur3 SINE Alu -9 140 6 4 1078 911 192 0 90 chr13 64727229 64727418 -55556894 - MTC LTR MaLR -249 172 1 4 1078 405 278 64 26 chr13 64727439 64727594 -55556718 + MLT1B LTR MaLR 264 441 -64 4 1078 307 283 187 0 chr13 64728061 64728250 -55556062 + Lx8 LINE L1 5718 5930 -370 4 1078 1783 162 129 6 chr13 64728339 64728681 -55555631 + ORR1C2 LTR MaLR 1 384 0 4 1078 630 0 0 0 chr13 64729954 64730024 -55554288 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 1078 224 269 44 15 chr13 64730219 64730287 -55554025 - MER5B DNA MER1_type -58 120 51 4 1078 611 342 172 4 chr13 64730765 64731044 -55553268 + MLT2F LTR ERVL 188 513 -150 4 1078 409 318 0 67 chr13 64731058 64731193 -55553119 + ID_B1 SINE B4 78 203 -21 4 1078 1537 152 20 12 chr13 64731490 64731743 -55552569 + RLTR12A LTR ERVK 1 255 -313 4 1078 506 112 34 0 chr13 64731746 64731835 -55552477 + RLTR12A LTR ERVK 477 568 0 4 1078 1910 273 88 7 chr13 64732207 64732820 -55551492 + Lx8 LINE L1 6811 7473 0 4 1078 2084 141 25 25 chr13 64732865 64733258 -55551054 - L1_Mur3 LINE L1 -2141 3739 3347 4 1078 1852 136 22 22 chr13 64733258 64733575 -55550737 + RLTR15 LTR ERVK 1 317 -42 4 1078 546 148 0 0 chr13 64733593 64733674 -55550638 - ID2 SINE ID 0 83 3 4 1078 239 121 0 0 chr13 64733675 64733708 -55550604 + RLTR15 LTR ERVK 302 334 -25 4 1078 4888 126 69 34 chr13 64733717 64734762 -55549550 - L1_Mur3 LINE L1 -2528 3352 2271 4 1078 351 274 8 41 chr13 64734854 64734976 -55549336 + GA-rich Low_complexity Low_complexity 1 118 0 4 1078 271 341 57 8 chr13 64735028 64735152 -55549160 + MER5B DNA MER1_type 1 130 -48 4 1078 447 252 39 0 chr13 64735661 64735764 -55548548 + PB1D10 SINE Alu 5 111 -6 4 1078 183 184 0 0 chr13 64735765 64735803 -55548509 + A-rich Low_complexity Low_complexity 1 38 0 4 1078 192 158 0 0 chr13 64735814 64735852 -55548460 + A-rich Low_complexity Low_complexity 3 40 0 4 1078 329 248 9 62 chr13 64735856 64735968 -55548344 + ID4 SINE ID 8 113 -39 4 1078 1007 269 106 68 chr13 64736651 64736990 -55547322 - ORR1E LTR MaLR -7 352 1 4 1078 339 318 98 17 chr13 64738502 64738675 -55545637 + MLT1J LTR MaLR 310 496 -16 4 1078 553 268 0 0 chr13 64738817 64738929 -55545383 + ID_B1 SINE B4 94 205 -19 4 1078 636 219 156 84 chr13 64740379 64740558 -55543754 - B3A SINE B2 -3 192 1 4 1078 2494 186 60 8 chr13 64741880 64742119 -55542193 + RLTR12B LTR ERVK 1 269 -259 4 1078 695 12 12 0 chr13 64742119 64742203 -55542109 + (GA)n Simple_repeat Simple_repeat 1 85 0 4 1078 885 89 0 0 chr13 64742205 64742329 -55541983 + (GGA)n Simple_repeat Simple_repeat 3 126 0 4 1078 2494 186 60 8 chr13 64742329 64742584 -55541728 + RLTR12B LTR ERVK 270 522 -6 4 1078 406 235 7 66 chr13 64742612 64742753 -55541559 + MLT1D LTR MaLR 363 617 -10 5 1078 1678 158 20 56 chr13 64743468 64743823 -55540489 - RMER6C LTR ERVK -3 687 346 5 134 36437 46 0 3 chr13 64743956 64750626 -55533686 - L1Md_T LINE L1 0 6585 1 5 1079 1789 126 80 13 chr13 64750627 64750940 -55533372 - RMER6C LTR ERVK -356 334 1 5 1079 213 424 31 6 chr13 64751028 64751070 -55533242 + L2a LINE L2 3014 3057 -369 5 1079 261 0 0 0 chr13 64751070 64751099 -55533213 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1079 213 424 31 6 chr13 64751099 64751215 -55533097 + L2a LINE L2 3058 3175 -251 5 1079 470 320 65 16 chr13 64751367 64751551 -55532761 - MLT2B1 LTR ERVL -39 528 336 5 1079 817 295 104 82 chr13 64751549 64751952 -55532360 + MLT2B1 LTR ERVL 109 520 0 5 1079 29 0 0 0 chr13 64752682 64752711 -55531601 + AT_rich Low_complexity Low_complexity 1 29 0 5 1079 369 0 0 0 chr13 64752912 64752953 -55531359 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 1079 267 152 0 0 chr13 64752953 64752999 -55531313 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 5 1079 345 261 144 104 chr13 64753037 64753238 -55531074 - B4 SINE B4 -2 290 82 5 1079 387 0 0 0 chr13 64753577 64753620 -55530692 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1079 222 235 0 14 chr13 64754035 64754104 -55530208 + T-rich Low_complexity Low_complexity 2 69 0 5 1079 24211 89 8 13 chr13 64754470 64758467 -55525845 - L1_Mus1 LINE L1 0 6567 2602 5 1079 1324 88 11 0 chr13 64758467 64758649 -55525663 - B2_Mm1t SINE B2 -8 185 2 5 1079 24211 102 3 17 chr13 64758649 64759105 -55525207 - L1_Mus1 LINE L1 -3282 2601 2145 5 1079 21358 135 15 74 chr13 64759099 64766423 -55517889 - L1Md_F2 LINE L1 -3 6579 189 5 1079 6458 44 0 8 chr13 64766500 64767353 -55516959 + L1_Mm LINE L1 3496 4341 -1542 5 1079 7580 67 8 3 chr13 64767366 64768356 -55515956 + L1Md_F2 LINE L1 5587 6581 -1 5 1079 2307 91 28 0 chr13 64769104 64769422 -55514890 + ORR1A2 LTR MaLR 1 327 0 5 1079 282 342 149 0 chr13 64769471 64769652 -55514660 - MIR SINE MIR -29 233 26 5 1079 444 37 0 0 chr13 64769909 64769963 -55514349 + (TTCA)n Simple_repeat Simple_repeat 4 57 0 5 1079 538 333 11 11 chr13 64769968 64770150 -55514162 - B3A SINE B2 -16 182 1 5 1079 898 234 100 24 chr13 64770151 64770361 -55513951 - B4A SINE B4 -62 230 5 5 1079 186 259 54 36 chr13 64771646 64771702 -55512610 - L2 LINE L2 -522 2897 2841 5 1079 1036 266 134 3 chr13 64772571 64772854 -55511458 + ORR1E LTR MaLR 1 320 -39 5 1079 786 22 0 0 chr13 64772854 64772946 -55511366 + (TTCC)n Simple_repeat Simple_repeat 4 95 0 5 1079 602 49 0 12 chr13 64772951 64773034 -55511278 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 5 1079 881 256 10 0 chr13 64773036 64773231 -55511081 - B3 SINE B2 -15 201 5 5 1079 5087 102 9 8 chr13 64773247 64773996 -55510316 - Lx LINE L1 -3 6651 5902 5 1079 940 171 1 14 chr13 64773996 64774194 -55510118 + L1_Mur2 LINE L1 3339 3567 -2579 5 1079 691 233 136 149 chr13 64774712 64775095 -55509217 + MTE2a LTR MaLR 1 378 -1 5 1079 3525 39 9 0 chr13 64776544 64776981 -55507331 + L1Md_F3 LINE L1 6144 6584 0 5 1079 598 248 0 0 chr13 64777299 64777416 -55506896 + B3A SINE B2 1 117 -81 5 1079 243 0 0 0 chr13 64777541 64777568 -55506744 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1079 471 74 41 21 chr13 64779931 64780028 -55504284 + (TCTCTG)n Simple_repeat Simple_repeat 2 100 0 5 1079 983 253 134 4 chr13 64780029 64780275 -55504037 - B4A SINE B4 -14 278 1 5 1079 238 309 0 0 chr13 64780391 64780446 -55503866 + MER96 DNA hAT 94 148 -27 5 1079 2621 85 51 48 chr13 64780493 64780888 -55503424 + MTA_Mm LTR MaLR 1 396 0 5 1079 1340 222 119 6 chr13 64781879 64782206 -55502106 + MTE2b LTR MaLR 8 371 -8 5 1079 299 265 39 39 chr13 64782453 64782555 -55501757 - MLT1A LTR MaLR 0 374 273 5 1079 284 310 0 0 chr13 64782959 64783017 -55501295 + RSINE1 SINE B4 86 143 -22 5 1079 252 0 0 0 chr13 64783021 64783049 -55501263 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1079 26 50 0 0 chr13 64783222 64783262 -55501050 + AT_rich Low_complexity Low_complexity 1 40 0 5 1079 655 225 243 0 chr13 64783269 64783438 -55500874 - B3 SINE B2 -6 210 1 5 1079 510 269 156 12 chr13 64783445 64783618 -55500694 - B3A SINE B2 0 198 1 5 1079 704 270 82 14 chr13 64783623 64783830 -55500482 - B4 SINE B4 -70 222 2 5 1079 195 69 0 0 chr13 64784330 64784359 -55499953 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1079 270 0 0 0 chr13 64784835 64784865 -55499447 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 5 1079 1381 88 0 5 chr13 64784886 64785080 -55499232 - L1_Mus2 LINE L1 -2 6564 6372 5 1079 495 0 0 0 chr13 64785425 64785480 -55498832 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1079 718 271 59 50 chr13 64785481 64785901 -55498411 - RLTR11B LTR ERVK -47 394 5 5 1079 261 299 91 100 chr13 64786286 64786606 -55497706 - ORR1C1 LTR MaLR -4 374 58 5 1079 548 235 209 29 chr13 64786826 64787032 -55497280 - RMER15 LTR ERVL -14 561 319 5 1079 495 0 0 0 chr13 64787228 64787283 -55497029 + (TG)n Simple_repeat Simple_repeat 1 55 0 5 1079 513 0 0 0 chr13 64787283 64787339 -55496973 + (GA)n Simple_repeat Simple_repeat 1 57 0 5 1079 27 29 0 0 chr13 64787580 64787614 -55496698 + AT_rich Low_complexity Low_complexity 1 34 0 5 1079 187 205 26 0 chr13 64787882 64787921 -55496391 + MIRm SINE MIR 222 261 -15 5 1079 217 191 24 0 chr13 64789744 64789786 -55494526 - L2 LINE L2 -484 2935 2893 5 1079 694 286 21 21 chr13 64789940 64790126 -55494186 + MTD LTR MaLR 21 206 -213 5 1079 2143 120 101 17 chr13 64790126 64790482 -55493830 + ORR1B1 LTR MaLR 1 386 -8 5 1079 325 240 60 37 chr13 64791516 64791650 -55492662 + RLTR15 LTR ERVK 205 341 -18 5 1079 692 54 0 11 chr13 64791664 64791758 -55492554 + (TTCC)n Simple_repeat Simple_repeat 4 96 0 5 1079 1620 0 0 0 chr13 64791758 64791993 -55492319 + (TCTCC)n Simple_repeat Simple_repeat 1 235 0 5 1079 675 117 0 0 chr13 64791991 64792094 -55492218 + (TTTC)n Simple_repeat Simple_repeat 3 105 0 5 1079 475 220 20 10 chr13 64792150 64792251 -55492061 - B3A SINE B2 -95 103 2 5 1079 2811 55 0 6 chr13 64792301 64792649 -55491663 + ORR1A1 LTR MaLR 1 346 0 5 1079 997 274 55 52 chr13 64792672 64792999 -55491313 + ORR1E LTR MaLR 6 333 -26 5 1079 685 196 29 14 chr13 64793945 64794085 -55490227 - MT2A LTR ERVL -391 142 1 5 1079 2285 214 32 174 chr13 64794376 64794665 -55489647 + RMER19C LTR ERVK 1 251 -360 5 1079 4559 68 0 0 chr13 64794665 64795238 -55489074 - L1_Mus1 LINE L1 0 6567 5995 5 1079 2285 214 32 174 chr13 64795238 64795660 -55488652 + RMER19C LTR ERVK 252 610 -1 5 1079 606 269 22 17 chr13 64796120 64796298 -55488014 + B3A SINE B2 4 182 -16 5 1079 1847 173 81 0 chr13 64796829 64797176 -55487136 + ORR1C1 LTR MaLR 1 375 -3 5 1079 653 252 86 64 chr13 64798429 64798742 -55485570 - RLTR15 LTR ERVK -16 343 24 5 1079 683 182 56 0 chr13 64798747 64798890 -55485422 - MYSERV-int LTR ERVK -865 5685 5535 5 1079 1091 112 15 46 chr13 64798892 64799089 -55485223 - Lx2B LINE L1 -4 6996 6806 5 1079 498 340 55 14 chr13 64799189 64799335 -55484977 - ID_B1 SINE B4 -68 156 5 5 1079 822 262 89 5 chr13 64799571 64799774 -55484538 - ID_B1 SINE B4 -3 221 2 5 1079 434 242 12 35 chr13 64799790 64799861 -55484451 + L1MA7 LINE L1 6125 6195 -96 5 1079 3257 38 2 20 chr13 64799861 64800264 -55484048 - MTA_Mm LTR MaLR 0 396 1 5 1079 434 242 12 35 chr13 64800264 64800363 -55483949 + L1MA7 LINE L1 6196 6291 0 5 1079 531 340 25 6 chr13 64800865 64801025 -55483287 - B3A SINE B2 -35 163 1 5 1079 26 74 0 0 chr13 64801097 64801151 -55483161 + AT_rich Low_complexity Low_complexity 1 54 0 5 1079 423 317 79 28 chr13 64801231 64801445 -55482867 - B4A SINE B4 -14 278 54 5 1079 22 56 0 0 chr13 64801491 64801527 -55482785 + AT_rich Low_complexity Low_complexity 1 36 0 5 1079 550 257 15 30 chr13 64801533 64801698 -55482614 - RSINE1 SINE B4 0 165 2 5 1079 477 303 68 86 chr13 64802280 64802558 -55481754 - B4A SINE B4 -19 273 1 5 1079 785 269 19 6 chr13 64803045 64803206 -55481106 + RSINE1 SINE B4 3 165 0 5 1079 560 271 82 0 chr13 64803240 64803410 -55480902 + B3A SINE B2 1 184 -14 5 1079 342 0 0 0 chr13 64803454 64803492 -55480820 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1079 519 112 0 0 chr13 64803740 64803820 -55480492 + (TC)n Simple_repeat Simple_repeat 1 80 0 5 1079 534 320 79 57 chr13 64803875 64804229 -55480083 - L1MCa LINE L1 -5139 1989 1628 5 1079 232 285 37 37 chr13 64804246 64804381 -55479931 - L1MCa LINE L1 -4899 1524 1390 5 1079 643 353 53 19 chr13 64805128 64805391 -55478921 - B4A SINE B4 -20 272 1 5 1079 322 299 87 13 chr13 64805606 64805755 -55478557 + RMER15 LTR ERVL 207 366 -209 5 1079 483 18 0 0 chr13 64805758 64805814 -55478498 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1079 813 251 34 0 chr13 64806432 64806607 -55477705 + MTE2a LTR MaLR 10 190 -189 5 1079 370 342 20 54 chr13 64806752 64806956 -55477356 - LTR81A LTR ERV1? -1033 317 121 5 1079 24 0 0 0 chr13 64807254 64807278 -55477034 + AT_rich Low_complexity Low_complexity 1 24 0 5 1079 260 188 0 14 chr13 64807316 64807386 -55476926 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 1079 562 131 32 8 chr13 64807412 64807535 -55476777 + CT-rich Low_complexity Low_complexity 2 127 0 5 1079 5185 60 3 3 chr13 64808234 64808900 -55475412 - L1Md_F2 LINE L1 0 6582 5917 5 1079 734 235 53 27 chr13 64809271 64809459 -55474853 - B3A SINE B2 0 198 6 5 1079 37562 26 2 7 chr13 64809523 64815531 -55468781 - L1Md_T LINE L1 0 6582 613 6 1079 5027 71 22 0 chr13 64815611 64816283 -55468029 - L1_Mus3 LINE L1 -7 6631 5945 6 1079 363 280 78 28 chr13 64816309 64816489 -55467823 + L1MB8 LINE L1 5912 6100 -78 6 1079 228 67 0 0 chr13 64817028 64817058 -55467254 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1079 1283 228 152 35 chr13 64817059 64817513 -55466799 - Lx9 LINE L1 -179 7465 6959 6 1079 212 158 0 26 chr13 64817733 64817772 -55466540 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1079 528 275 112 6 chr13 64818210 64818389 -55465923 + B3A SINE B2 1 198 0 6 1079 398 267 15 77 chr13 64818596 64818726 -55465586 + RMER15 LTR ERVL 39 160 -415 6 1079 744 279 98 0 chr13 64818724 64818928 -55465384 + RMER15 LTR ERVL 275 498 -77 6 1079 250 316 0 117 chr13 64819018 64819129 -55465183 - LTR40a LTR ERVL -4 515 418 6 1079 312 250 26 0 chr13 64819955 64820031 -55464281 + ID4 SINE ID 3 80 -3 6 1079 831 345 65 73 chr13 64820687 64821122 -55463190 + MT2A LTR ERVL 1 432 -101 6 1079 1208 219 123 9 chr13 64821122 64821462 -55462850 + MTE2b LTR MaLR 1 379 0 6 1079 831 345 65 73 chr13 64821462 64821489 -55462823 + MT2A LTR ERVL 433 459 -74 6 1079 1356 116 23 9 chr13 64822082 64822300 -55462012 - URR1A DNA MER1_type -1 225 5 6 1079 801 58 0 0 chr13 64822347 64822450 -55461862 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 6 1079 317 299 81 27 chr13 64822531 64822679 -55461633 - MLT1A1 LTR MaLR -4 404 249 6 1079 276 343 48 85 chr13 64822700 64822888 -55461424 - B4 SINE B4 -60 232 52 6 1079 450 329 13 7 chr13 64823165 64823315 -55460997 + RSINE1 SINE B4 2 152 -13 6 1079 23 68 0 0 chr13 64823337 64823381 -55460931 + AT_rich Low_complexity Low_complexity 1 44 0 6 1079 22 0 0 0 chr13 64823666 64823688 -55460624 + AT_rich Low_complexity Low_complexity 1 22 0 6 1079 7560 52 0 37 chr13 64823706 64825038 -55459274 - L1_Mus1 LINE L1 -2 6565 5269 6 1079 25 31 0 0 chr13 64825371 64825403 -55458909 + AT_rich Low_complexity Low_complexity 1 32 0 6 1079 192 77 0 0 chr13 64825971 64825997 -55458315 + (CACCC)n Simple_repeat Simple_repeat 1 26 0 6 1079 1886 106 46 3 chr13 64826199 64826484 -55457828 + RLTR22_Mur LTR ERVK 1 297 -1551 6 1079 565 250 41 124 chr13 64826566 64826675 -55457637 + RMER12 LTR ERVK 1101 1195 -127 6 1079 7953 31 0 1 chr13 64826675 64827611 -55456701 + L1Md_A LINE L1 5648 6582 0 6 1079 565 250 41 124 chr13 64827611 64827743 -55456569 + RMER12 LTR ERVK 1196 1322 0 6 1079 695 217 16 0 chr13 64828044 64828173 -55456139 + B1_Mur3 SINE Alu 2 132 -17 6 1079 3046 56 0 27 chr13 64828305 64828712 -55455600 + L1Md_F2 LINE L1 6174 6569 -13 6 1079 733 188 0 115 chr13 64829712 64829929 -55454383 - Lx4B LINE L1 -2 7056 6865 6 1079 1017 58 0 0 chr13 64829960 64830097 -55454215 + (TCTA)n Simple_repeat Simple_repeat 2 138 0 6 1079 498 311 28 22 chr13 64830139 64830320 -55453992 - B4A SINE B4 -25 267 86 6 1079 316 322 17 17 chr13 64831714 64831831 -55452481 - PB1D10 SINE Alu 0 117 1 6 1079 3187 53 0 5 chr13 64832089 64832485 -55451827 - MTA_Mm LTR MaLR -2 394 1 6 1079 717 280 161 74 chr13 64832514 64833000 -55451312 + L1MC2 LINE L1 5564 6091 -253 6 1079 1277 205 20 12 chr13 64833332 64833579 -55450733 - MTC LTR MaLR -17 404 156 6 1079 299 290 51 70 chr13 64833552 64833708 -55450604 - RLTR14 LTR ERV1 -6 376 224 6 1079 1120 206 10 0 chr13 64833983 64834187 -55450125 - MTC LTR MaLR -203 218 13 6 1079 1914 169 113 0 chr13 64835087 64835441 -55448871 - ORR1B1 LTR MaLR 0 394 1 6 1079 494 133 112 26 chr13 64835911 64836027 -55448285 + Lx4B LINE L1 6910 7035 -23 6 1079 1569 6 0 0 chr13 64836030 64836208 -55448104 + (CAAAG)n Simple_repeat Simple_repeat 2 179 0 6 1079 233 341 38 81 chr13 64836313 64836498 -55447814 - Charlie24 DNA MER1_type -1290 1160 984 6 1079 4229 91 46 10 chr13 64840012 64840637 -55443675 + Lx2A LINE L1 6346 6993 -15 6 1079 228 86 0 0 chr13 64840637 64840672 -55443640 + (TAA)n Simple_repeat Simple_repeat 1 35 0 6 1079 546 321 90 50 chr13 64841012 64841291 -55443021 - B4 SINE B4 0 292 3 6 1079 717 88 0 0 chr13 64841987 64842089 -55442223 + (TG)n Simple_repeat Simple_repeat 2 103 0 6 1079 468 269 20 82 chr13 64842699 64842845 -55441467 - RSINE1 SINE B4 -21 144 8 6 1079 194 62 0 30 chr13 64842929 64842962 -55441350 + (TTG)n Simple_repeat Simple_repeat 2 33 0 6 1079 574 256 0 0 chr13 64842962 64843079 -55441233 - PB1D9 SINE Alu -3 117 1 6 1079 339 65 0 0 chr13 64843165 64843211 -55441101 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1079 567 250 100 0 chr13 64843214 64843354 -55440958 - B3A SINE B2 -42 156 3 6 1079 2417 131 0 8 chr13 64844395 64844757 -55439555 + L1_Mur2 LINE L1 343 701 -6011 6 1079 451 293 35 1 chr13 64845081 64845198 -55439114 - B1F2 SINE Alu 0 117 1 6 1079 273 238 10 134 chr13 64845117 64845214 -55439098 - MT2B LTR ERVL -362 239 155 6 1079 567 144 0 0 chr13 64845257 64845382 -55438930 + (GA)n Simple_repeat Simple_repeat 1 125 0 6 1079 2229 189 24 19 chr13 64845391 64845801 -55438511 - MTD LTR MaLR -7 412 1 6 1079 299 256 132 12 chr13 64845801 64845884 -55438428 - B3A SINE B2 -51 147 55 6 1079 2317 202 73 2 chr13 64846211 64846701 -55437611 - RLTR11A2 LTR ERVK -2 525 1 6 1079 357 24 0 0 chr13 64847133 64847175 -55437137 + (GA)n Simple_repeat Simple_repeat 1 42 0 6 1079 372 18 0 50 chr13 64847332 64847392 -55436920 + (TTTTA)n Simple_repeat Simple_repeat 2 58 0 6 1079 587 274 31 82 chr13 64847392 64847587 -55436725 - B3A SINE B2 -8 190 6 6 1079 588 269 75 30 chr13 64850217 64850416 -55433896 - L1M2 LINE L1 -2313 3830 3623 6 1079 1051 254 122 30 chr13 64851171 64851508 -55432804 - ORR1D2 LTR MaLR 0 370 3 6 1079 327 275 0 0 chr13 64851744 64851813 -55432499 + ID4_ SINE ID 11 79 -4 6 1079 359 312 10 10 chr13 64851860 64851957 -55432355 + ID_B1 SINE B4 2 98 -126 6 1079 509 0 16 0 chr13 64854265 64854326 -55429986 + (TATG)n Simple_repeat Simple_repeat 2 63 0 6 1079 553 296 28 14 chr13 64854337 64854481 -55429831 - RSINE1 SINE B4 -19 146 1 6 1079 239 268 0 0 chr13 64854687 64854743 -55429569 + (CATA)n Simple_repeat Simple_repeat 2 57 0 6 1079 1949 156 93 19 chr13 64855287 64855654 -55428658 - ORR1B1 LTR MaLR 0 394 1 6 1079 6350 172 96 35 chr13 64855654 64855705 -55428607 - ORR1B1-int LTR MaLR 0 1509 1462 6 1079 3822 65 2 21 chr13 64855705 64856236 -55428076 + L1Md_F2 LINE L1 6062 6582 0 6 1079 6350 172 96 35 chr13 64856236 64856336 -55427976 - ORR1B1-int LTR MaLR -48 1461 1362 6 1079 1249 31 18 6 chr13 64856336 64856500 -55427812 - L1Md_F3 LINE L1 0 6584 6419 6 1079 6350 172 96 35 chr13 64856500 64856538 -55427774 - ORR1B1-int LTR MaLR -148 1361 1332 6 1079 315 49 0 0 chr13 64856538 64856579 -55427733 + (CTA)n Simple_repeat Simple_repeat 1 41 0 6 1079 6350 172 96 35 chr13 64856579 64857808 -55426504 - ORR1B1-int LTR MaLR -178 1331 1 6 1079 2304 132 65 5 chr13 64857808 64858180 -55426132 - ORR1B1 LTR MaLR 0 394 1 6 1079 1068 313 4 26 chr13 64858189 64858458 -55425854 + B4A SINE B4 25 287 -5 6 1079 218 57 57 0 chr13 64858946 64858981 -55425331 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 6 1079 279 0 0 0 chr13 64858981 64859012 -55425300 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1079 441 0 0 0 chr13 64860069 64860118 -55424194 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1079 419 295 97 77 chr13 64860378 64860727 -55423585 + HAL1b LINE L1 497 852 -1157 6 1079 261 0 0 0 chr13 64861743 64861772 -55422540 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 1079 1011 291 25 28 chr13 64862359 64862642 -55421670 - B4 SINE B4 -6 286 5 6 1079 413 345 100 56 chr13 64862773 64863114 -55421198 + ORR1E LTR MaLR 4 359 0 6 1079 991 234 10 0 chr13 64863809 64864010 -55420302 - B3 SINE B2 -13 203 1 6 1079 21 0 0 0 chr13 64864108 64864129 -55420183 + AT_rich Low_complexity Low_complexity 1 21 0 6 1079 2297 130 0 19 chr13 64864354 64864729 -55419583 + Lx LINE L1 6287 6654 0 6 1079 204 125 0 0 chr13 64865371 64865403 -55418909 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 6 1079 645 14 0 0 chr13 64865687 64865761 -55418551 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 1079 731 93 8 0 chr13 64865787 64865905 -55418407 + (TAGA)n Simple_repeat Simple_repeat 4 122 0 6 1079 946 187 105 29 chr13 64867154 64867363 -55416949 + URR1B DNA MER1_type 1 225 0 6 1079 998 247 79 40 chr13 64867393 64867722 -55416590 + Lx8 LINE L1 7130 7471 -2 6 1079 315 222 119 20 chr13 64867761 64867862 -55416450 + L1MCa LINE L1 1770 1880 -4628 6 1079 3308 35 5 2 chr13 64867864 64868259 -55416053 - MTA_Mm LTR MaLR 0 396 1 6 1079 1297 182 48 1 chr13 64868814 64869111 -55415201 + L1VL4 LINE L1 804 1125 -5859 6 1079 1726 83 0 0 chr13 64869110 64869338 -55414974 + MusHAL1 LINE L1 195 422 -2932 6 1079 3907 139 39 15 chr13 64869335 64870052 -55414260 + MusHAL1 LINE L1 939 1672 -1681 6 1079 3668 147 57 52 chr13 64870019 64870396 -55413916 + L1VL4 LINE L1 3606 3980 -1897 6 1079 1150 62 0 0 chr13 64870396 64870541 -55413771 + B1_Mm SINE Alu 3 147 0 6 1079 3668 147 57 52 chr13 64870541 64870916 -55413396 + L1VL4 LINE L1 3981 4362 -1515 6 1079 1879 194 60 16 chr13 64870913 64871295 -55413017 + Lx3C LINE L1 6576 6974 -2 6 1079 359 262 182 12 chr13 64871340 64871510 -55412802 + L1MCa LINE L1 2035 2233 -4275 6 1079 338 303 27 18 chr13 64871604 64871715 -55412597 + PB1D10 SINE Alu 5 116 -1 6 1079 230 275 147 70 chr13 64872070 64872199 -55412113 + MLT1A LTR MaLR 236 374 0 6 1079 260 236 101 0 chr13 64872223 64872312 -55412000 + L1MCa LINE L1 2289 2386 -4122 6 1079 975 285 107 8 chr13 64872451 64872713 -55411599 + B4A SINE B4 1 288 -4 6 1079 731 278 37 15 chr13 64872731 64873001 -55411311 + L1MCa LINE L1 2496 2771 -3550 6 1079 24 32 0 0 chr13 64874263 64874294 -55410018 + AT_rich Low_complexity Low_complexity 1 31 0 6 1079 245 200 46 128 chr13 64874413 64874522 -55409790 + B3A SINE B2 11 110 -88 6 1079 23 33 0 0 chr13 64875224 64875254 -55409058 + AT_rich Low_complexity Low_complexity 1 30 0 6 1079 1188 272 11 15 chr13 64876280 64876541 -55407771 - B4 SINE B4 -30 262 3 6 1079 774 198 11 34 chr13 64877067 64877266 -55407046 + B3 SINE B2 1 186 -9 6 1079 336 210 161 0 chr13 64877847 64877928 -55406384 + ORR1D1 LTR MaLR 1 94 -280 7 1079 215 360 107 0 chr13 64878718 64878915 -55405397 + MIR SINE MIR 32 249 -13 7 1079 23 0 0 0 chr13 64879158 64879181 -55405131 + AT_rich Low_complexity Low_complexity 1 23 0 7 1079 1003 262 38 72 chr13 64879256 64879336 -55404976 - B4A SINE B4 0 292 228 7 1079 829 152 19 70 chr13 64879336 64879492 -55404820 - B1_Mur3 SINE Alu 0 149 2 7 1079 1003 262 38 72 chr13 64879492 64879703 -55404609 - B4A SINE B4 -65 227 11 7 1079 278 286 14 0 chr13 64879824 64879894 -55404418 + ID4 SINE ID 4 74 -9 7 1079 226 242 0 0 chr13 64880259 64880321 -55403991 + Lx6 LINE L1 7373 7434 -26 7 1080 486 284 5 78 chr13 64880714 64880932 -55403380 + L1M3 LINE L1 4527 4728 -1412 7 1080 222 37 0 0 chr13 64881290 64881317 -55402995 + (TTA)n Simple_repeat Simple_repeat 1 27 0 7 1080 222 209 0 0 chr13 64881802 64881845 -55402467 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 7 1080 375 23 0 0 chr13 64881861 64881905 -55402407 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1080 529 269 106 75 chr13 64881914 64882179 -55402133 - B4 SINE B4 -18 274 2 7 1080 24 0 0 29 chr13 64882469 64882488 -55401824 + AT_rich Low_complexity Low_complexity 1 19 0 7 1080 946 241 35 0 chr13 64882488 64882691 -55401621 - B3 SINE B2 -5 211 2 7 1080 24 0 0 29 chr13 64882691 64882706 -55401606 + AT_rich Low_complexity Low_complexity 1 15 0 7 1080 491 325 68 0 chr13 64882709 64882872 -55401440 - B3A SINE B2 -24 174 1 7 1080 19361 52 2 1 chr13 64883279 64886445 -55397867 + L1Md_F2 LINE L1 3446 6582 0 7 1080 486 284 113 18 chr13 64887159 64887388 -55396924 + LTR37A LTR ERV1 93 343 -83 7 1080 454 251 133 72 chr13 64887491 64887671 -55396641 - B3A SINE B2 -6 192 2 7 1080 439 311 152 65 chr13 64887992 64888487 -55395825 + MLT2B3 LTR ERVL 17 554 0 7 1080 411 250 75 28 chr13 64889520 64889627 -55394685 + RSINE1 SINE B4 3 114 -51 7 1080 216 0 0 0 chr13 64889627 64889651 -55394661 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1080 477 0 0 0 chr13 64889652 64889705 -55394607 + (GA)n Simple_repeat Simple_repeat 1 53 0 7 1080 3927 92 2 0 chr13 64889726 64890306 -55394006 - Lx4A LINE L1 -1138 5920 5339 7 1080 1618 72 14 0 chr13 64890303 64890525 -55393787 + L1_Mus3 LINE L1 5873 6097 -541 7 1080 690 13 0 0 chr13 64890819 64890898 -55393414 + (TC)n Simple_repeat Simple_repeat 1 79 0 7 1080 189 0 0 0 chr13 64890898 64890918 -55393394 + (CA)n Simple_repeat Simple_repeat 1 21 0 7 1080 256 190 63 47 chr13 64890918 64891045 -55393267 + (TCTA)n Simple_repeat Simple_repeat 3 131 0 7 1080 558 0 0 0 chr13 64891056 64891118 -55393194 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 7 1080 317 295 103 35 chr13 64891126 64891242 -55393070 - B4A SINE B4 -3 289 166 7 1080 1677 21 0 0 chr13 64891883 64892072 -55392240 - B2_Mm1t SINE B2 -3 190 2 7 1080 557 170 9 0 chr13 64892418 64892530 -55391782 + (TA)n Simple_repeat Simple_repeat 2 114 0 7 1080 578 288 33 27 chr13 64892540 64892690 -55391622 - B3A SINE B2 -47 151 1 7 1080 2003 153 128 3 chr13 64892806 64893172 -55391140 + MTC LTR MaLR 1 412 -9 7 1080 609 14 0 0 chr13 64893173 64893243 -55391069 + (TC)n Simple_repeat Simple_repeat 2 71 0 7 1080 802 295 57 8 chr13 64893273 64893536 -55390776 - B4A SINE B4 -13 279 4 7 1080 380 321 54 0 chr13 64894012 64894124 -55390188 - B1_Mur2 SINE Alu -2 118 1 7 1080 24 0 0 0 chr13 64894124 64894148 -55390164 + AT_rich Low_complexity Low_complexity 1 24 0 7 1080 245 274 0 0 chr13 64894895 64894957 -55389355 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 7 1080 685 278 40 23 chr13 64894957 64895134 -55389178 - B3A SINE B2 -16 182 3 7 1080 25 0 0 0 chr13 64895139 64895164 -55389148 + AT_rich Low_complexity Low_complexity 1 25 0 7 1080 249 414 9 0 chr13 64895286 64895397 -55388915 + MER94 DNA AcHobo 23 134 0 7 1080 21 57 0 0 chr13 64895695 64895730 -55388582 + AT_rich Low_complexity Low_complexity 1 35 0 7 1080 486 198 38 0 chr13 64895752 64895909 -55388403 + GA-rich Low_complexity Low_complexity 6 168 0 7 1080 882 280 50 0 chr13 64898542 64898742 -55385570 - ID_B1 SINE B4 -3 221 12 7 1080 829 310 28 28 chr13 64899935 64900187 -55384125 - B4A SINE B4 -31 261 10 7 1080 7251 82 28 9 chr13 64900707 64901711 -55382601 + RLTR13D5 LTR ERVK 1 1023 0 7 1080 271 275 49 12 chr13 64901964 64902045 -55382267 - MIR3 SINE MIR -23 185 102 7 1080 888 232 117 3 chr13 64903320 64903644 -55380668 + L1_Mur3 LINE L1 834 1194 -6518 7 1080 854 253 10 5 chr13 64903662 64903861 -55380451 + Lx6 LINE L1 6958 7157 -303 7 1080 6576 180 27 58 chr13 64903884 64904713 -55379599 - Lx2B LINE L1 -3 6997 6135 7 1080 215 23 91 0 chr13 64904713 64904757 -55379555 + (CATTC)n Simple_repeat Simple_repeat 3 50 0 7 1080 6576 180 27 58 chr13 64904757 64905221 -55379091 - Lx2B LINE L1 -866 6134 5678 7 1080 536 43 0 0 chr13 64905221 64905290 -55379022 + B1_Mm SINE Alu 73 141 -6 7 1080 261 0 0 0 chr13 64905290 64905319 -55378993 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 7 1080 6576 128 30 115 chr13 64905319 64905699 -55378613 - Lx2B LINE L1 -1323 5677 5274 7 1080 484 230 16 8 chr13 64905701 64905828 -55378484 + Lx6 LINE L1 7193 7320 -140 7 1080 929 294 38 34 chr13 64906128 64906454 -55377858 + ORR1E LTR MaLR 1 315 -79 7 1080 200 35 35 0 chr13 64906455 64906484 -55377828 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 7 1080 180 0 0 0 chr13 64906732 64906752 -55377560 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 7 1080 278 125 0 82 chr13 64906777 64906838 -55377474 - B2_Mm2 SINE B2 -93 102 47 7 1080 1092 117 47 6 chr13 64906885 64907057 -55377255 - B2_Mm1t SINE B2 -14 179 1 7 1080 869 291 65 25 chr13 64907303 64907641 -55376671 + MTE2a LTR MaLR 18 370 -49 7 1080 34 55 0 0 chr13 64907902 64907957 -55376355 + AT_rich Low_complexity Low_complexity 1 55 0 7 1080 383 194 10 0 chr13 64908558 64908656 -55375656 + (TG)n Simple_repeat Simple_repeat 2 100 0 7 1080 23 33 0 0 chr13 64909795 64909825 -55374487 + AT_rich Low_complexity Low_complexity 1 30 0 7 1080 309 269 122 8 chr13 64910655 64910786 -55373526 + B4A SINE B4 7 152 -140 7 1080 374 294 29 0 chr13 64910798 64910900 -55373412 + B4A SINE B4 188 292 0 7 1080 225 286 0 95 chr13 64910850 64910966 -55373346 + B3 SINE B2 112 216 0 7 1080 3297 41 5 5 chr13 64911936 64912332 -55371980 + MTA_Mm LTR MaLR 1 396 0 7 1080 4261 40 60 0 chr13 64912525 64913045 -55371267 - L1_Mus1 LINE L1 -1 6566 6016 7 1080 288 138 0 22 chr13 64913374 64913442 -55370870 + Lx LINE L1 4672 4737 -1146 7 1080 6976 123 20 7 chr13 64913495 64915398 -55368914 + Lx LINE L1 4733 6654 0 7 1080 333 0 0 0 chr13 64915628 64915665 -55368647 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 7 1080 408 255 11 0 chr13 64915737 64915831 -55368481 + B4A SINE B4 2 96 -196 7 1080 4388 138 10 8 chr13 64915836 64916639 -55367673 + L1_Mur3 LINE L1 3615 4419 -1461 7 1080 4564 210 35 83 chr13 64916641 64917791 -55366521 + Lx6 LINE L1 6039 7133 -327 7 1080 33 25 0 0 chr13 64917791 64917831 -55366481 + AT_rich Low_complexity Low_complexity 1 40 0 7 1080 690 207 118 6 chr13 64917894 64918064 -55366248 + Lx4B LINE L1 6646 6834 -224 7 1080 257 253 10 10 chr13 64918072 64918168 -55366144 + T-rich Low_complexity Low_complexity 5 100 0 7 1080 334 138 182 5 chr13 64918673 64918780 -55365532 - B2_Mm2 SINE B2 -2 191 47 7 1080 1013 108 81 35 chr13 64918846 64919019 -55365293 - B2_Mm2 SINE B2 -14 181 1 7 1080 1321 18 12 18 chr13 64919084 64919253 -55365059 + L1Md_F3 LINE L1 6416 6583 -1 7 1080 1123 68 12 6 chr13 64919284 64919446 -55364866 + (TTTC)n Simple_repeat Simple_repeat 2 164 0 7 1080 1134 51 0 0 chr13 64919446 64919583 -55364729 - B1_Mm SINE Alu -10 137 1 7 1080 12961 82 21 4 chr13 64919583 64922226 -55362086 - L1VL2 LINE L1 -643 2972 284 7 1080 364 220 53 13 chr13 64922224 64922376 -55361936 + Lx6 LINE L1 7129 7258 -202 7 1080 835 319 14 0 chr13 64922383 64922590 -55361722 + B4 SINE B4 81 290 -2 7 1080 348 24 0 0 chr13 64922603 64922644 -55361668 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1080 1854 150 55 37 chr13 64924227 64924628 -55359684 + RMER17C LTR ERVK 3 410 0 7 1080 266 256 99 99 chr13 64924633 64924654 -55359658 - B2_Mm2 SINE B2 -8 187 160 7 1080 297 0 0 0 chr13 64924654 64924687 -55359625 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1080 459 0 0 0 chr13 64924687 64924737 -55359575 + (GA)n Simple_repeat Simple_repeat 1 51 0 7 1080 505 219 126 57 chr13 64924737 64924866 -55359446 - B3A SINE B2 -25 173 37 7 1080 1399 274 45 48 chr13 64924892 64925267 -55359045 + MTEa LTR MaLR 6 379 0 7 1080 2285 107 25 0 chr13 64925551 64925870 -55358442 + ORR1A2 LTR MaLR 1 327 0 7 1080 1291 66 11 27 chr13 64926124 64926311 -55358001 - B2_Mm1t SINE B2 0 193 10 7 1080 287 309 0 23 chr13 64926235 64926321 -55357991 - RSINE1 SINE B4 -79 86 3 7 1080 983 255 5 0 chr13 64926539 64926751 -55357561 + B3 SINE B2 1 213 -3 7 1080 195 42 0 0 chr13 64926784 64926808 -55357504 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 7 1080 591 278 145 96 chr13 64926847 64927297 -55357015 + RMER15 LTR ERVL 1 571 -4 7 1080 269 296 61 0 chr13 64927603 64927718 -55356594 + Helitron1Na_Mam RC Helitron 430 551 -511 7 1080 484 264 87 57 chr13 64927854 64928119 -55356193 + Helitron1Na_Mam RC Helitron 723 995 -67 7 1080 463 342 0 24 chr13 64928108 64928231 -55356081 + RSINE1 SINE B4 24 143 -22 7 1080 210 150 0 0 chr13 64929099 64929139 -55355173 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 7 1080 23 33 0 0 chr13 64929278 64929308 -55355004 + AT_rich Low_complexity Low_complexity 1 30 0 7 1080 566 318 35 25 chr13 64929927 64930211 -55354101 + B4A SINE B4 2 288 -4 7 1080 351 191 84 11 chr13 64930340 64930435 -55353877 + L1MA5 LINE L1 6168 6269 -31 7 1080 295 207 17 33 chr13 64930507 64930567 -55353745 + ORR1E LTR MaLR 3 61 -298 7 1080 219 139 0 0 chr13 64930586 64930622 -55353690 + (CA)n Simple_repeat Simple_repeat 1 36 0 8 1080 29 0 0 0 chr13 64930629 64930658 -55353654 + AT_rich Low_complexity Low_complexity 1 29 0 8 1080 260 254 150 23 chr13 64930765 64930938 -55353374 + L1MA4 LINE L1 6045 6239 -61 8 1080 31 0 0 0 chr13 64931016 64931047 -55353265 + AT_rich Low_complexity Low_complexity 1 31 0 8 1080 4339 14 0 0 chr13 64931266 64931748 -55352564 - LTRIS_Mm LTR ERV1 0 482 1 8 1080 33775 32 5 18 chr13 64931748 64936264 -55348048 - MuRRS-int LTR ERV1 0 4690 1 8 1080 4384 8 0 0 chr13 64936264 64936746 -55347566 - LTRIS_Mm LTR ERV1 0 482 1 8 1080 438 265 19 10 chr13 64936989 64937092 -55347220 + B4A SINE B4 2 105 -187 8 1080 4164 116 68 17 chr13 64937092 64937797 -55346515 + RMER6A LTR ERVK 4 744 -12 8 1080 706 229 65 59 chr13 64937818 64938004 -55346308 + B4A SINE B4 106 292 0 8 1080 240 301 0 52 chr13 64937965 64938042 -55346270 - RLTR22_Mur LTR ERVK -472 1376 1304 8 1080 257 191 29 29 chr13 64938127 64938197 -55346115 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 8 1080 1751 240 45 45 chr13 64938662 64939176 -55345136 - RLTR20B3 LTR ERVK -43 534 21 8 1080 1207 274 76 102 chr13 64939432 64940047 -55344265 - MT2B LTR ERVL 0 601 3 8 1080 194 302 0 9 chr13 64940624 64940731 -55343581 + (TG)n Simple_repeat Simple_repeat 1 106 0 8 1080 503 318 18 85 chr13 64940766 64940931 -55343381 - B4 SINE B4 -137 155 2 8 1080 5322 109 20 34 chr13 64940943 64941795 -55342517 + RLTR22_Mur LTR ERVK 1 840 -1008 8 1080 1570 26 0 5 chr13 64941918 64942110 -55342202 - L1Md_F2 LINE L1 -14 6568 6378 8 1080 268 273 171 88 chr13 64942208 64942413 -55341899 + RMER12 LTR ERVK 1101 1322 0 8 1080 228 111 0 0 chr13 64942767 64942803 -55341509 + (CCA)n Simple_repeat Simple_repeat 3 38 0 8 1080 533 245 35 0 chr13 64944150 64944293 -55340019 - L1MB1 LINE L1 0 6168 6021 8 1080 282 152 17 17 chr13 64944298 64944358 -55339954 + L1M3 LINE L1 5492 5551 -761 8 1080 347 256 32 70 chr13 64944653 64944856 -55339456 + L1M3 LINE L1 5586 5774 -526 8 1080 231 36 0 0 chr13 64945163 64945191 -55339121 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 8 1080 519 60 0 0 chr13 64945191 64945258 -55339054 + (TC)n Simple_repeat Simple_repeat 2 68 0 8 1080 472 235 20 0 chr13 64946013 64946111 -55338201 - PB1D10 SINE Alu -6 111 12 8 1080 427 331 23 8 chr13 64946224 64946352 -55337960 - B1F1 SINE Alu -8 141 12 8 1080 3144 70 15 117 chr13 64947024 64947561 -55336751 + RLTR45 LTR ERVK 1 482 0 8 1080 316 230 20 0 chr13 64947751 64947851 -55336461 - Lx7 LINE L1 -17 7679 7578 8 1080 849 156 156 0 chr13 64947869 64948049 -55336263 + L1_Mur2 LINE L1 4512 4719 -1158 8 1080 4823 100 34 1 chr13 64948067 64948776 -55335536 + Lx LINE L1 5922 6653 -1 8 1080 196 158 17 17 chr13 64948781 64948839 -55335473 + A-rich Low_complexity Low_complexity 3 60 0 8 1080 197 83 28 0 chr13 64948848 64948884 -55335428 + (CA)n Simple_repeat Simple_repeat 2 38 0 8 1080 440 211 39 39 chr13 64948884 64949012 -55335300 - Lx7 LINE L1 -293 7403 7276 8 1080 251 301 103 83 chr13 64949030 64949186 -55335126 + MT2B2 LTR ERVL 93 251 -333 8 1080 551 191 18 18 chr13 64949097 64949209 -55335103 + PB1D10 SINE Alu 6 117 0 8 1080 259 270 0 31 chr13 64949888 64949953 -55334359 + polypurine Low_complexity Low_complexity 4 66 0 8 1080 214 347 0 13 chr13 64950086 64950162 -55334150 + MIRb SINE MIR 177 251 -17 8 1080 286 311 16 63 chr13 64950578 64950705 -55333607 + MLT1A LTR MaLR 235 355 -19 8 1080 240 125 60 36 chr13 64950710 64950793 -55333519 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 8 1080 504 0 0 0 chr13 64951248 64951304 -55333008 + (TC)n Simple_repeat Simple_repeat 1 56 0 8 1080 295 140 20 0 chr13 64951310 64951372 -55332940 - B1_Mur4 SINE Alu -31 118 53 8 1080 512 269 0 0 chr13 64952823 64952931 -55331381 - PB1D10 SINE Alu 0 117 10 8 1080 548 207 51 8 chr13 64952971 64953099 -55331213 + B1_Mur2 SINE Alu 2 144 -5 8 1080 189 309 70 43 chr13 64953420 64953535 -55330777 + MIR SINE MIR 110 227 -35 8 1080 7013 72 18 1 chr13 64954541 64956110 -55328202 + L1_Mus2 LINE L1 4906 6567 0 8 1080 2777 75 28 0 chr13 64956260 64956649 -55327663 - BGLII LTR ERVK -21 400 1 8 1080 196 349 41 100 chr13 64956662 64956952 -55327360 - L2 LINE L2 -747 2672 2400 8 1080 550 194 10 0 chr13 64957291 64957389 -55326923 + MTE2b LTR MaLR 1 99 -280 8 1080 25 0 0 0 chr13 64957472 64957497 -55326815 + AT_rich Low_complexity Low_complexity 1 25 0 8 1080 552 300 67 18 chr13 64958014 64958238 -55326074 - MLT1B LTR MaLR -122 268 34 8 1080 340 162 94 0 chr13 64958681 64958860 -55325452 - L1_Mus4 LINE L1 0 6654 6504 8 1080 2133 98 31 3 chr13 64958862 64959181 -55325131 + Lx LINE L1 5911 6238 -416 8 1080 24 67 0 0 chr13 64959501 64959546 -55324766 + AT_rich Low_complexity Low_complexity 1 45 0 8 1080 423 219 0 0 chr13 64960153 64960249 -55324063 + (TA)n Simple_repeat Simple_repeat 2 97 0 8 1080 1325 195 103 48 chr13 64961482 64961500 -55322812 + ORR1D1 LTR MaLR 65 77 -297 8 1080 2500 154 29 2 chr13 64961500 64961910 -55322402 - MTC LTR MaLR 0 421 1 8 1080 1325 195 103 48 chr13 64961910 64962000 -55322312 + ORR1D1 LTR MaLR 78 196 -178 8 1080 648 0 0 0 chr13 64962000 64962072 -55322240 + (TC)n Simple_repeat Simple_repeat 1 72 0 8 1080 1325 195 103 48 chr13 64962072 64962253 -55322059 + ORR1D1 LTR MaLR 197 371 -3 8 1080 4994 232 59 19 chr13 64962257 64963436 -55320876 + ORR1D1-int LTR MaLR 2 1228 -142 8 1080 1033 217 36 10 chr13 64963460 64963706 -55320606 - ORR1D-int LTR MaLR -1277 303 46 8 1080 610 308 125 7 chr13 64964690 64964877 -55319435 - B3A SINE B2 -13 203 4 8 1080 657 238 0 0 chr13 64965565 64965687 -55318625 - B1_Mur2 SINE Alu -26 123 2 8 1080 207 0 0 0 chr13 64965698 64965721 -55318591 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1080 990 104 0 0 chr13 64965722 64965856 -55318456 - B1_Mus1 SINE Alu -12 136 3 8 1080 504 0 0 0 chr13 64965898 64965954 -55318358 + (TG)n Simple_repeat Simple_repeat 1 56 0 8 1080 324 276 121 10 chr13 64966008 64966107 -55318205 - RSINE1 SINE B4 -54 111 2 8 1080 528 16 0 0 chr13 64966203 64966264 -55318048 + (TC)n Simple_repeat Simple_repeat 2 62 0 8 1080 751 278 81 73 chr13 64967267 64967484 -55316828 + B4A SINE B4 2 222 -70 8 1080 647 250 0 20 chr13 64967484 64967635 -55316677 + B1_Mur1 SINE Alu 2 149 0 8 1080 751 278 81 73 chr13 64967635 64967677 -55316635 + B4A SINE B4 223 263 -29 8 1080 516 302 26 4 chr13 64968069 64968322 -55315990 + B4A SINE B4 1 289 -3 8 1080 779 252 164 33 chr13 64969087 64969509 -55314803 - L1MB3 LINE L1 -4 6179 5703 8 1080 216 366 28 56 chr13 64969634 64969741 -55314571 - MIRc SINE MIR -144 124 21 8 1080 673 241 111 151 chr13 64970453 64970732 -55313580 + B4 SINE B4 2 269 -23 8 1080 435 19 0 0 chr13 64970732 64970784 -55313528 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1080 1184 308 26 41 chr13 64971730 64972075 -55312237 + ORR1E LTR MaLR 3 342 -17 8 1080 485 178 0 18 chr13 64972946 64973055 -55311257 + (CATA)n Simple_repeat Simple_repeat 1 107 0 8 1080 620 302 6 0 chr13 64973380 64973539 -55310773 - RSINE1 SINE B4 -2 163 4 8 1080 279 79 0 0 chr13 64974199 64974237 -55310075 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 8 1080 751 200 16 0 chr13 64974237 64974362 -55309950 - B1_Mus1 SINE Alu -13 135 9 8 1080 390 248 98 78 chr13 64974249 64974402 -55309910 - MT2B LTR ERVL -325 276 121 8 1080 279 289 98 98 chr13 64974513 64974697 -55309615 + ORR1E LTR MaLR 1 184 -175 8 1080 270 0 0 0 chr13 64975170 64975200 -55309112 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 8 1080 1017 261 24 24 chr13 64976003 64976293 -55308019 + B4A SINE B4 3 292 0 8 1080 25 83 0 0 chr13 64978239 64978299 -55306013 + AT_rich Low_complexity Low_complexity 1 60 0 8 1080 1983 111 3 84 chr13 64979367 64979722 -55304590 + IAPLTR1a_Mm LTR ERVK 1 326 -11 8 1080 54781 11 3 21 chr13 64979723 64986324 -55297988 + IAPEz-int LTR ERVK 1 6481 0 8 1080 1983 111 3 84 chr13 64986324 64986679 -55297633 + IAPLTR1a_Mm LTR ERVK 1 326 -11 8 1080 260 420 53 0 chr13 64988001 64988132 -55296180 - ORR1E LTR MaLR -221 138 1 8 1080 22 0 0 0 chr13 64988317 64988339 -55295973 + AT_rich Low_complexity Low_complexity 1 22 0 8 1080 21 0 0 0 chr13 64988363 64988384 -55295928 + AT_rich Low_complexity Low_complexity 1 21 0 8 1080 585 0 0 0 chr13 64988607 64988672 -55295640 + (TA)n Simple_repeat Simple_repeat 2 66 0 8 1080 26 50 0 0 chr13 64988924 64988964 -55295348 + AT_rich Low_complexity Low_complexity 1 40 0 8 1080 792 282 81 22 chr13 64989191 64989463 -55294849 + B4A SINE B4 5 292 0 8 1080 276 30 0 0 chr13 64990459 64990492 -55293820 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 1080 303 28 0 0 chr13 64990492 64990527 -55293785 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 1080 939 283 48 110 chr13 64990660 64991087 -55293225 + MTE2a LTR MaLR 1 398 -21 8 1080 26 74 0 0 chr13 64991175 64991229 -55293083 + AT_rich Low_complexity Low_complexity 1 54 0 8 1080 2871 126 2 37 chr13 64991236 64991722 -55292590 - Lx3B LINE L1 -3 6970 6502 8 1080 656 290 76 29 chr13 64992103 64992380 -55291932 - B4A SINE B4 -2 290 1 8 1080 723 271 74 28 chr13 64992669 64992992 -55291320 + RLTR15 LTR ERVK 3 340 -19 8 1080 1953 147 30 50 chr13 64994067 64994468 -55289844 - L1_Mur3 LINE L1 -1681 4199 3807 8 1080 25 51 0 0 chr13 64994479 64994518 -55289794 + AT_rich Low_complexity Low_complexity 1 39 0 8 1080 836 181 311 11 chr13 64994539 64994893 -55289419 - Lx2B LINE L1 -4 7054 6498 8 1080 2443 152 31 0 chr13 64994889 64995304 -55289008 - L1_Mur1 LINE L1 -9 5877 5450 8 1080 852 91 0 0 chr13 64995302 64995423 -55288889 - L1_Mur3 LINE L1 -1730 4150 4030 8 1080 1951 265 11 19 chr13 64995424 64996101 -55288211 + Lx6 LINE L1 6460 7427 -33 8 1080 26 0 0 0 chr13 64996659 64996685 -55287627 + AT_rich Low_complexity Low_complexity 1 26 0 8 1080 192 77 0 0 chr13 64996889 64996915 -55287397 + (CA)n Simple_repeat Simple_repeat 1 26 0 8 1080 268 291 31 12 chr13 64997563 64997723 -55286589 + (CA)n Simple_repeat Simple_repeat 2 164 0 9 1080 418 39 38 25 chr13 64997747 64997826 -55286486 + (CA)n Simple_repeat Simple_repeat 1 80 0 9 1080 541 292 66 35 chr13 64998104 64998338 -55285974 - LTR40c LTR ERVL 0 519 242 9 1080 2314 181 68 72 chr13 64998339 64998880 -55285432 + RMER4B LTR ERVK 1 539 -46 9 1080 272 303 11 43 chr13 64998836 64998929 -55285383 - LTR40c LTR ERVL -227 235 146 9 1080 436 302 0 0 chr13 64999771 64999877 -55284435 - B3A SINE B2 -89 109 4 9 1080 541 257 125 0 chr13 65000311 65000447 -55283865 + MTE2a LTR MaLR 129 281 -98 1 1080 2026 156 0 77 chr13 65000447 65000520 -55283792 - ORR1A1 LTR MaLR 0 346 286 2 1080 2867 46 0 0 chr13 65000520 65000869 -55283443 - L1_Mus1 LINE L1 -2 6565 6217 3 1080 2026 156 0 77 chr13 65000869 65001170 -55283142 - ORR1A1 LTR MaLR -61 285 1 2 1080 22 35 0 0 chr13 65001261 65001290 -55283022 + AT_rich Low_complexity Low_complexity 1 29 0 4 1080 3273 50 35 9 chr13 65002902 65003326 -55280986 + L1_Mus1 LINE L1 6133 6567 0 5 1080 732 54 0 0 chr13 65005597 65005690 -55278622 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 1080 306 250 138 14 chr13 65005991 65006129 -55278183 + MER96B DNA hAT 262 416 -1 7 1080 255 125 0 0 chr13 65006164 65006204 -55278108 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1080 23 0 0 0 chr13 65008238 65008261 -55276051 + AT_rich Low_complexity Low_complexity 1 23 0 9 1080 414 345 141 0 chr13 65008468 65008674 -55275638 + L1M3de LINE L1 483 717 -6096 1 1080 6559 92 47 9 chr13 65008680 65010252 -55274060 + L1_Mus3 LINE L1 5001 6633 -5 1 1080 366 350 70 70 chr13 65010291 65010506 -55273806 + L1M3de LINE L1 775 989 -5824 1 1080 340 303 165 22 chr13 65010527 65010709 -55273603 + L1M3de LINE L1 1052 1259 -5554 1 1080 663 302 59 27 chr13 65010731 65011154 -55273158 + L1M3de LINE L1 1376 2134 -4519 1 1080 23 0 0 0 chr13 65011330 65011353 -55272959 + AT_rich Low_complexity Low_complexity 1 23 0 1 16 898 187 112 34 chr13 65011546 65011779 -55272533 + RMER12 LTR ERVK 1044 1294 -28 1 1081 15470 123 23 136 chr13 65011974 65017801 -55266511 + L1VL2 LINE L1 498 5076 -801 1 1081 360 64 0 0 chr13 65017817 65017864 -55266448 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1081 826 254 43 16 chr13 65017865 65018053 -55266259 - B3 SINE B2 -13 203 11 1 1081 291 246 0 0 chr13 65018065 65018130 -55266182 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1081 364 306 131 19 chr13 65018146 65018166 -55266146 - B4A SINE B4 -1 291 272 1 1081 500 0 17 0 chr13 65018166 65018226 -55266086 + (GA)n Simple_repeat Simple_repeat 1 61 0 1 1081 364 306 131 19 chr13 65018226 65018465 -55265847 - B4A SINE B4 -21 271 5 1 1081 209 258 0 61 chr13 65019002 65019068 -55265244 + CT-rich Low_complexity Low_complexity 4 65 0 2 1081 239 265 42 25 chr13 65019755 65019875 -55264437 + (TG)n Simple_repeat Simple_repeat 1 122 0 2 1081 267 291 144 120 chr13 65020034 65020159 -55264153 + B4A SINE B4 88 215 -77 2 1081 293 289 70 30 chr13 65020109 65020209 -55264103 - B1F2 SINE Alu -45 104 1 2 1081 559 270 50 56 chr13 65020209 65020287 -55264025 - B4A SINE B4 -214 78 2 2 1081 757 290 33 22 chr13 65020302 65020482 -55263830 + B4A SINE B4 6 187 -105 2 1081 207 0 0 0 chr13 65020549 65020572 -55263740 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1081 252 356 144 0 chr13 65020652 65020742 -55263570 + B1F2 SINE Alu 3 105 -44 2 1081 601 196 88 22 chr13 65020753 65020889 -55263423 + B3A SINE B2 1 145 -53 2 1081 279 0 0 0 chr13 65020896 65020927 -55263385 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1081 938 335 30 4 chr13 65024621 65024891 -55259421 + B4A SINE B4 8 284 -8 3 1081 630 0 0 0 chr13 65025705 65025775 -55258537 + (CAAAA)n Simple_repeat Simple_repeat 3 72 0 3 1081 1583 205 137 80 chr13 65026164 65026688 -55257624 + RMER4B LTR ERVK 17 570 -15 3 1081 812 216 48 11 chr13 65026809 65026996 -55257316 + MurERV4-int LTR ERVK 130 323 -4937 3 1081 11348 138 57 6 chr13 65027033 65028265 -55256047 + MurERV4-int LTR ERVK 2234 3519 -1741 3 1081 612 0 0 0 chr13 65028265 65028333 -55255979 + (GA)n Simple_repeat Simple_repeat 1 68 0 3 1081 11348 138 57 6 chr13 65028333 65029145 -55255167 + MurERV4-int LTR ERVK 3520 4381 -879 3 1081 1095 159 5 37 chr13 65030558 65030774 -55253538 + MurERV4-int LTR ERVK 4397 4605 -655 3 1081 19733 75 8 5 chr13 65030776 65033031 -55251281 - L1VL1 LINE L1 -1808 4075 1809 3 1081 2492 132 66 18 chr13 65033031 65033484 -55250828 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1081 19733 81 9 30 chr13 65033484 65034920 -55249392 - L1VL1 LINE L1 -4075 1808 410 3 1081 3186 218 68 33 chr13 65034937 65034993 -55249319 + MurERV4-int LTR ERVK 5558 5604 -946 3 1081 4395 88 5 0 chr13 65034993 65035574 -55248738 - MT2B2 LTR ERVL 0 584 1 3 1081 3374 189 64 41 chr13 65035574 65036475 -55247837 + MurERV4-int LTR ERVK 8095 8957 -2 3 1081 3974 57 0 0 chr13 65036665 65037176 -55247136 - L1Md_F2 LINE L1 0 5883 5373 3 1081 5479 54 1 14 chr13 65037176 65037887 -55246425 + L1Md_F2 LINE L1 5879 6580 -2 3 1081 271 249 68 20 chr13 65037955 65038096 -55246216 - RMER4B LTR ERVK -14 571 389 3 1081 739 245 37 46 chr13 65038079 65038393 -55245919 + RMER4B LTR ERVK 255 573 -12 4 1081 2826 161 16 24 chr13 65038542 65039044 -55245268 + RLTR12B LTR ERVK 20 517 -11 4 1081 1093 205 100 8 chr13 65039953 65040204 -55244108 - RMER6-int LTR ERVK -2871 306 33 4 1081 2647 176 76 65 chr13 65040219 65040946 -55243366 - RMER6C LTR ERVK -9 711 55 4 1081 277 250 62 0 chr13 65040955 65041051 -55243261 + L1M5 LINE L1 3470 3571 -2575 4 1081 294 29 0 0 chr13 65041072 65041107 -55243205 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 4 1081 1403 39 6 0 chr13 65041107 65041284 -55243028 + (GA)n Simple_repeat Simple_repeat 2 180 0 4 1081 678 130 0 0 chr13 65041284 65041392 -55242920 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 4 1081 10175 118 6 72 chr13 65041591 65043139 -55241173 - L1_Mur2 LINE L1 -866 5011 3470 4 1081 1302 62 0 0 chr13 65043139 65043364 -55240948 + (TTGG)n Simple_repeat Simple_repeat 1 225 0 4 1081 10175 118 6 72 chr13 65043364 65043771 -55240541 - L1_Mur2 LINE L1 -2408 3469 3185 4 1081 14976 82 4 1 chr13 65043795 65046730 -55237582 - L1_Mus1 LINE L1 0 6567 3625 4 1081 1848 147 42 14 chr13 65046730 65047118 -55237194 - L1_Mur2 LINE L1 -2764 3122 2744 4 1081 180 97 0 0 chr13 65047119 65047150 -55237162 + (TTAA)n Simple_repeat Simple_repeat 4 34 0 5 1081 9367 89 6 13 chr13 65047151 65048953 -55235359 - Lx3_Mus LINE L1 -17 6992 5208 5 1081 14473 69 30 3 chr13 65048946 65050806 -55233506 + L1_Mur1 LINE L1 3011 4926 -960 5 1081 1130 117 6 0 chr13 65050806 65050985 -55233327 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1081 14473 69 30 3 chr13 65050985 65051259 -55233053 + L1_Mur1 LINE L1 4927 5202 -684 5 1081 5021 117 101 10 chr13 65051253 65051849 -55232463 - L1_Mur2 LINE L1 -3143 2734 2050 4 1081 441 0 0 0 chr13 65051849 65051898 -55232414 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1081 5021 117 101 10 chr13 65051898 65052288 -55232024 - L1_Mur2 LINE L1 -3828 2049 1658 4 1081 1262 112 5 0 chr13 65052282 65052497 -55231815 - L1_Mur2 LINE L1 -5763 1323 1108 4 1081 318 65 0 0 chr13 65052486 65052532 -55231780 - L1_Mur2 LINE L1 -4609 1268 1223 5 1081 4735 86 3 0 chr13 65053936 65054602 -55229710 - L1_Mus3 LINE L1 -309 6329 5662 5 1081 2190 85 7 3 chr13 65054602 65054908 -55229404 + L1_Mus3 LINE L1 6328 6634 -4 5 1081 263 294 36 9 chr13 65055328 65055438 -55228874 - MMSAT4 Satellite Satellite -23 145 33 5 1081 311 274 32 16 chr13 65055557 65055683 -55228629 - MMSAT4 Satellite Satellite -5 163 36 5 1081 1873 144 35 9 chr13 65056535 65056851 -55227461 - ORR1A4 LTR MaLR -5 324 1 5 1081 1772 60 8 0 chr13 65057226 65057460 -55226852 + L1Md_F2 LINE L1 6344 6579 -3 6 1081 293 328 51 66 chr13 65058446 65058583 -55225729 - RMER12 LTR ERVK -4 1318 1184 6 1081 1679 168 78 58 chr13 65059414 65059813 -55224499 + MTB_Mm LTR MaLR 1 407 0 6 1081 423 0 0 0 chr13 65060275 65060322 -55223990 + (TTAG)n Simple_repeat Simple_repeat 2 48 0 6 1081 382 83 0 0 chr13 65060325 65060385 -55223927 - Lx2A LINE L1 -9 6999 6940 6 1081 5099 97 70 17 chr13 65060392 65061235 -55223077 + Lx2A1 LINE L1 6040 6927 -81 6 1081 2248 150 11 0 chr13 65061330 65061684 -55222628 + ORR1B2 LTR MaLR 2 359 -8 6 1081 415 312 18 0 chr13 65061726 65061835 -55222477 - ID_B1 SINE B4 0 224 114 6 1081 353 333 69 15 chr13 65061835 65061857 -55222455 - B1F SINE Alu 0 149 12 6 1081 717 294 67 9 chr13 65062234 65062457 -55221855 - B4 SINE B4 0 292 57 6 1081 267 250 0 0 chr13 65062455 65062511 -55221801 - B1F2 SINE Alu -93 56 1 7 1081 183 184 77 58 chr13 65062682 65062734 -55221578 - L2c LINE L2 -236 3151 3099 7 1081 258 237 33 0 chr13 65062887 65062958 -55221354 + ID2 SINE ID 2 74 -9 7 1081 360 0 0 0 chr13 65062972 65063012 -55221300 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1081 357 93 0 0 chr13 65063248 65063302 -55221010 + (CACCC)n Simple_repeat Simple_repeat 3 56 0 7 1081 258 284 122 28 chr13 65063593 65063908 -55220404 + L1MEf LINE L1 1199 1616 -5124 7 1081 564 196 360 19 chr13 65063908 65064069 -55220243 + B3 SINE B2 1 216 0 7 1081 674 203 15 38 chr13 65064620 65064753 -55219559 + B1_Mur4 SINE Alu 1 130 -20 7 1081 237 250 13 13 chr13 65065019 65065096 -55219216 + L1MEf LINE L1 3852 3928 -2716 7 1081 587 310 112 0 chr13 65065690 65065877 -55218435 + B4A SINE B4 11 218 -74 7 1081 457 118 65 13 chr13 65065890 65065967 -55218345 + BC1_Mm scRNA scRNA 3 83 -69 7 1081 459 0 0 0 chr13 65066017 65066068 -55218244 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 1081 25 31 0 0 chr13 65066241 65066273 -55218039 + AT_rich Low_complexity Low_complexity 1 32 0 8 1081 1828 197 8 0 chr13 65066377 65066733 -55217579 + RLTR15 LTR ERVK 1 359 0 8 1081 893 296 27 19 chr13 65066940 65067198 -55217114 - B4A SINE B4 -23 269 10 8 1081 1098 75 14 0 chr13 65067276 65067422 -55216890 + B1_Mus1 SINE Alu 1 148 0 8 1081 847 134 22 0 chr13 65067888 65068022 -55216290 - RLTR30 LTR ERV1 -36 343 207 8 1081 1805 186 91 3 chr13 65068084 65068435 -55215877 + ORR1B1 LTR MaLR 1 382 -12 8 1081 1738 153 36 12 chr13 65068436 65068777 -55215535 - ORR1A4 LTR MaLR 0 394 23 8 1081 184 238 0 23 chr13 65068777 65068820 -55215492 - L4 LINE RTE -765 1264 1223 8 1081 1126 49 21 0 chr13 65068855 65068999 -55215313 - L1_Mus2 LINE L1 -1 6565 6419 8 1081 248 286 13 25 chr13 65069666 65069745 -55214567 - ID4_ SINE ID -4 79 2 9 1081 314 344 71 10 chr13 65069752 65070046 -55214266 - L1MEc LINE L1 -3327 2992 2681 9 1081 4010 93 51 29 chr13 65070076 65070664 -55213648 - MT2B LTR ERVL 0 601 1 9 1081 227 369 21 63 chr13 65070829 65071020 -55213292 + RMER4B LTR ERVK 10 192 -393 9 1081 3943 114 21 21 chr13 65071316 65071926 -55212386 - Lx LINE L1 0 6654 6045 9 1081 2786 86 5 0 chr13 65071926 65072256 -55212056 + Lx LINE L1 5636 5966 -688 9 1081 2677 61 0 0 chr13 65072256 65072600 -55211712 + L1Md_F2 LINE L1 6238 6581 -1 9 1081 2786 86 5 0 chr13 65072600 65072665 -55211647 + Lx LINE L1 5967 6032 -622 9 1081 294 263 35 0 chr13 65072695 65072809 -55211503 - L1MEc LINE L1 -4034 2366 2249 9 1081 255 309 34 40 chr13 65072925 65073100 -55211212 - L1MEc LINE L1 -6136 264 91 9 1081 225 119 0 0 chr13 65073112 65073154 -55211158 + (T)n Simple_repeat Simple_repeat 1 42 0 9 1081 399 306 66 36 chr13 65073192 65073497 -55210815 - Kanga2_a DNA Tc2 -141 747 434 9 1081 723 258 93 0 chr13 65074003 65074251 -55210061 - L1M3e LINE L1 -6755 275 5 9 1081 1011 104 72 18 chr13 65074306 65074472 -55209840 - B2_Mm2 SINE B2 -19 176 2 9 1081 243 250 15 30 chr13 65074888 65074954 -55209358 + ID4_ SINE ID 9 73 -10 1 1081 34833 52 12 4 chr13 65074983 65080483 -55203829 + L1Md_T LINE L1 99 5586 -297 1 1081 8056 55 0 0 chr13 65080483 65081479 -55202833 + L1Md_T LINE L1 5587 6582 0 1 1081 669 317 0 56 chr13 65081483 65081787 -55202525 + Lx8 LINE L1 6915 7201 -272 1 1081 790 224 6 18 chr13 65081885 65082049 -55202263 + ORR1D1 LTR MaLR 1 162 -212 1 1081 1628 164 85 7 chr13 65082012 65082306 -55202006 - ORR1B1 LTR MaLR -77 317 1 1 1081 289 306 71 89 chr13 65082774 65082969 -55201343 - MTEb LTR MaLR -14 365 158 1 1081 30 0 0 0 chr13 65083104 65083134 -55201178 + AT_rich Low_complexity Low_complexity 1 30 0 1 1081 9341 107 14 11 chr13 65083134 65084805 -55199507 - Lx4A LINE L1 -4 7054 5378 1 1081 461 88 0 62 chr13 65084805 65084902 -55199410 - L1Md_F2 LINE L1 0 6582 6492 1 1081 4012 97 13 5 chr13 65084902 65085021 -55199291 - Lx4A LINE L1 -500 5377 5259 1 1081 223 300 20 0 chr13 65085021 65085071 -55199241 - B1_Mur2 SINE Alu -96 53 3 1 1081 327 350 0 0 chr13 65085505 65085605 -55198707 + RSINE1 SINE B4 45 144 -21 1 1081 7855 132 24 67 chr13 65085824 65087351 -55196961 - L1Md_F2 LINE L1 0 6582 5108 1 1081 228 195 0 0 chr13 65087351 65087392 -55196920 + B3A SINE B2 2 42 -156 1 1081 7855 132 24 67 chr13 65087392 65087853 -55196459 - L1Md_F2 LINE L1 0 5107 4661 1 1081 680 266 75 0 chr13 65088101 65088289 -55196023 - B3 SINE B2 -14 202 1 1 1081 2775 177 96 10 chr13 65088310 65089261 -55195051 - Lx7 LINE L1 -1344 6352 5326 1 1081 818 206 21 0 chr13 65089262 65089451 -55194861 + Lx6 LINE L1 7091 7283 -177 1 1081 21 0 0 0 chr13 65089688 65089709 -55194603 + AT_rich Low_complexity Low_complexity 1 21 0 1 1081 29 84 0 0 chr13 65089807 65089878 -55194434 + AT_rich Low_complexity Low_complexity 1 71 0 1 1081 730 88 9 0 chr13 65089923 65090036 -55194276 + Lx2 LINE L1 6883 6996 -1 1 1081 288 286 0 25 chr13 65090087 65090166 -55194146 + ORR1D1 LTR MaLR 6 82 -292 1 1081 536 224 0 11 chr13 65090535 65090716 -55193596 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 1081 284 248 8 0 chr13 65090752 65090869 -55193443 + (CA)n Simple_repeat Simple_repeat 1 118 0 1 1081 1243 89 0 6 chr13 65090918 65091088 -55193224 - B2_Mm2 SINE B2 -25 170 2 1 1081 919 144 29 11 chr13 65091210 65091385 -55192927 + Lx7 LINE L1 7514 7691 -5 1 1081 37355 59 1 23 chr13 65091441 65098320 -55185992 - L1Md_T LINE L1 -1 6581 99 1 1081 442 209 9 9 chr13 65098322 65098438 -55185874 - L1Md_T LINE L1 -6397 219 104 1 1081 1441 268 61 9 chr13 65098436 65098877 -55185435 - Lx8 LINE L1 -549 6924 6461 1 1081 31 26 0 0 chr13 65098959 65098997 -55185315 + AT_rich Low_complexity Low_complexity 1 38 0 1 1081 906 216 10 5 chr13 65099030 65099235 -55185077 - Lx7 LINE L1 -307 7389 7184 1 1081 2761 241 50 32 chr13 65099242 65099984 -55184328 - Lx7 LINE L1 -700 6996 6242 1 1081 253 171 56 22 chr13 65100683 65100773 -55183539 + (GTTTG)n Simple_repeat Simple_repeat 2 94 0 1 1081 246 42 62 0 chr13 65100792 65100840 -55183472 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 1 1081 1161 62 7 0 chr13 65100842 65100988 -55183324 - B1_Mus2 SINE Alu 0 147 1 1 1081 1167 64 0 0 chr13 65101021 65101177 -55183135 - L1_Mus1 LINE L1 0 6567 6412 1 1081 961 47 16 0 chr13 65101177 65101304 -55183008 + B1_Mus2 SINE Alu 19 147 0 1 1081 394 58 0 0 chr13 65101327 65101379 -55182933 - L1_Mus1 LINE L1 -134 6433 6382 1 1081 198 0 0 0 chr13 65102209 65102231 -55182081 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1081 5395 198 66 9 chr13 65102236 65103714 -55180598 - Lx7 LINE L1 -1463 6233 4648 1 1081 2395 213 43 81 chr13 65103715 65104402 -55179910 - Lx7 LINE L1 -3825 2055 1352 1 1081 596 71 0 0 chr13 65104402 65104487 -55179825 + L1_Mus2 LINE L1 6481 6565 -1 1 1081 2395 213 43 81 chr13 65104487 65104579 -55179733 - Lx7 LINE L1 -4529 1351 1304 1 1081 1264 68 61 22 chr13 65104579 65104760 -55179552 - B2_Mm2 SINE B2 -7 188 1 1 1081 2395 243 16 149 chr13 65104760 65105019 -55179293 - Lx7 LINE L1 -6425 1303 1093 1 1081 1219 103 49 0 chr13 65105019 65105204 -55179108 - B2_Mm2 SINE B2 0 195 2 1 1081 546 253 7 171 chr13 65105204 65105485 -55178827 - Lx7 LINE L1 -6636 1092 843 1 1081 252 0 0 0 chr13 65105911 65105939 -55178373 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 1081 1314 151 27 9 chr13 65105948 65106168 -55178144 - URR1B DNA MER1_type 0 225 2 1 1081 315 0 0 0 chr13 65106389 65106424 -55177888 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1081 632 287 0 7 chr13 65106450 65106594 -55177718 + ID_B1 SINE B4 80 222 -2 1 1081 21 0 0 0 chr13 65106594 65106615 -55177697 + AT_rich Low_complexity Low_complexity 1 21 0 1 1081 2147 158 22 12 chr13 65107617 65108028 -55176284 + Lx LINE L1 6218 6632 -22 1 1081 249 167 222 0 chr13 65108294 65108366 -55175946 + L1M4b LINE L1 1433 1520 -5814 1 1081 600 14 0 0 chr13 65109365 65109434 -55174878 + (GA)n Simple_repeat Simple_repeat 1 69 0 1 1081 293 318 180 9 chr13 65109660 65109771 -55174541 - MLT2B2 LTR ERVL -180 335 206 1 1081 1040 112 7 10 chr13 65110014 65110075 -55174237 + (GAAA)n Simple_repeat Simple_repeat 1 61 -236 1 1081 1040 112 7 10 chr13 65110082 65110313 -55173999 + (GAAA)n Simple_repeat Simple_repeat 62 297 0 1 1081 443 131 59 29 chr13 65110313 65110406 -55173906 + Lx9 LINE L1 7537 7633 -11 1 1081 351 0 0 0 chr13 65110413 65110452 -55173860 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1081 1120 120 0 0 chr13 65110459 65110617 -55173695 + B2_Mm2 SINE B2 1 158 -37 1 1081 495 0 0 0 chr13 65110618 65110673 -55173639 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 1 1081 3063 37 7 4 chr13 65110947 65111351 -55172961 - L1Md_F2 LINE L1 -621 5961 5585 1 1081 306 0 0 0 chr13 65111500 65111534 -55172778 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1081 1133 83 0 0 chr13 65112341 65112485 -55171827 - L1_Mus1 LINE L1 0 6567 6424 1 1081 412 265 113 42 chr13 65112970 65113112 -55171200 - RSINE1 SINE B4 -9 156 5 1 1081 21 0 0 0 chr13 65113125 65113146 -55171166 + AT_rich Low_complexity Low_complexity 1 21 0 1 1081 788 272 12 14 chr13 65113146 65113360 -55170952 - B3A SINE B2 0 216 6 1 1081 2497 232 86 15 chr13 65113553 65113988 -55170324 + L1_Mur3 LINE L1 5038 5493 -387 1 1081 3416 26 36 8 chr13 65113988 65114373 -55169939 + MTA_Mm LTR MaLR 1 396 0 1 1081 2497 232 86 15 chr13 65114373 65114649 -55169663 + L1_Mur3 LINE L1 5494 5799 -81 1 1081 884 88 8 8 chr13 65114684 65114810 -55169502 + B2_Mm1t SINE B2 1 126 -67 1 1081 1787 227 81 31 chr13 65114830 65115312 -55169000 + Lx9 LINE L1 7134 7639 -5 1 1081 1287 278 46 27 chr13 65115305 65115862 -55168450 + L1M2 LINE L1 3332 3912 -2234 1 1081 1265 122 5 16 chr13 65116382 65116566 -55167746 + B2_Mm1t SINE B2 2 183 -10 1 1081 327 254 166 28 chr13 65117372 65117583 -55166729 + L1MA7 LINE L1 5893 6132 -159 1 1081 1777 211 16 25 chr13 65117882 65118027 -55166285 - ORR1D1 LTR MaLR 0 374 229 1 1081 1227 215 34 227 chr13 65118027 65118653 -55165659 + RLTR16 LTR ERVK 1 505 0 1 1081 1777 211 16 25 chr13 65118653 65118871 -55165441 - ORR1D1 LTR MaLR -146 228 14 1 1081 695 131 24 16 chr13 65119446 65119570 -55164742 - RMER6A LTR ERVK -631 125 1 1 1081 564 146 0 0 chr13 65119769 65119872 -55164440 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1081 22 56 0 0 chr13 65119872 65119908 -55164404 + AT_rich Low_complexity Low_complexity 1 36 0 1 1081 1146 99 99 0 chr13 65122641 65122803 -55161509 + B2_Mm1t SINE B2 2 179 -14 1 1081 230 222 18 36 chr13 65122846 65122902 -55161410 + B2_Mm2 SINE B2 47 101 -94 1 1081 204 311 96 43 chr13 65123030 65123124 -55161188 - MIRb SINE MIR -131 137 39 1 1081 1090 56 0 6 chr13 65123163 65123306 -55161006 - B1_Mm SINE Alu 0 147 12 1 1081 225 204 0 18 chr13 65123404 65123459 -55160853 + MER31A LTR ERV1 432 485 0 1 1081 201 143 0 0 chr13 65123561 65123596 -55160716 + (CTA)n Simple_repeat Simple_repeat 1 35 0 1 1081 391 235 35 0 chr13 65124371 65124456 -55159856 + B4A SINE B4 1 88 -204 1 1081 273 267 48 38 chr13 65124456 65124476 -55159836 + B3A SINE B2 1 106 -92 1 1081 333 0 0 0 chr13 65124586 65124623 -55159689 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1081 775 279 111 0 chr13 65124665 65124980 -55159332 - L1MB2 LINE L1 -1 6170 5821 1 1081 1511 70 21 0 chr13 65125159 65125345 -55158967 - B2_Mm2 SINE B2 -5 190 1 1 1081 276 0 68 0 chr13 65125448 65125492 -55158820 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1081 596 75 21 0 chr13 65125655 65125749 -55158563 + (TAGA)n Simple_repeat Simple_repeat 3 98 0 1 1081 35056 61 3 8 chr13 65126811 65131816 -55152496 + L1Md_F3 LINE L1 397 5586 -297 1 1081 8816 29 4 2 chr13 65131816 65132798 -55151514 + L1Md_F3 LINE L1 5587 6570 -14 1 1081 1558 64 27 0 chr13 65132850 65133037 -55151275 + B2_Mm2 SINE B2 2 193 -2 1 1081 268 224 119 0 chr13 65133076 65133143 -55151169 + ID_B1 SINE B4 136 210 -14 1 1081 552 301 7 14 chr13 65133193 65133338 -55150974 + B1F SINE Alu 3 146 -3 1 1081 1336 147 36 14 chr13 65133766 65133987 -55150325 - URR1A DNA MER1_type 0 226 1 1 1081 423 0 0 0 chr13 65136099 65136146 -55148166 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1081 408 20 0 0 chr13 65139307 65139356 -55144956 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1081 1942 119 53 0 chr13 65140407 65140709 -55143603 + ORR1A2 LTR MaLR 1 318 -9 1 1081 2762 166 37 2 chr13 65141794 65142284 -55142028 - Lx4B LINE L1 -671 6387 5881 1 135 3491 205 20 6 chr13 65142284 65142938 -55141374 + Lx4B LINE L1 6392 7054 -4 1 1082 1070 118 0 6 chr13 65142939 65143101 -55141211 + ORR1C2 LTR MaLR 13 173 -211 1 1082 1463 116 33 0 chr13 65143500 65143715 -55140597 - Lx3A LINE L1 -95 6886 6665 1 1082 5362 79 36 8 chr13 65143716 65144433 -55139879 + L1Md_F2 LINE L1 5843 6579 -3 1 1082 1031 142 82 26 chr13 65144455 65144687 -55139625 + Lx3A LINE L1 5978 6222 -759 1 1082 493 289 23 0 chr13 65144687 65144815 -55139497 - ID_B1 SINE B4 -68 156 26 1 1082 387 41 0 0 chr13 65145158 65145207 -55139105 + (TTTG)n Simple_repeat Simple_repeat 3 51 0 1 1082 295 336 0 8 chr13 65148016 65148136 -55136176 + (TCCA)n Simple_repeat Simple_repeat 2 120 0 1 1082 957 42 0 0 chr13 65148182 65148300 -55136012 + (TTCC)n Simple_repeat Simple_repeat 4 121 0 1 1082 482 323 109 17 chr13 65148583 65148885 -55135427 - L2 LINE L2 -373 3046 2717 1 1082 612 0 0 0 chr13 65148994 65149062 -55135250 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1082 339 25 0 0 chr13 65149068 65149108 -55135204 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 1082 180 0 0 0 chr13 65149691 65149711 -55134601 + (TAATG)n Simple_repeat Simple_repeat 1 20 0 2 1082 237 241 35 0 chr13 65150055 65150113 -55134199 + MTEb LTR MaLR 294 353 -26 2 1082 1672 180 138 18 chr13 65150938 65151106 -55133206 + ORR1D1 LTR MaLR 1 171 -203 2 1082 515 16 0 15 chr13 65151106 65151171 -55133141 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 1082 1672 180 138 18 chr13 65151171 65151336 -55132976 + ORR1D1 LTR MaLR 172 374 0 2 1082 180 328 15 30 chr13 65151417 65151483 -55132829 - MIR3 SINE MIR -7 201 137 2 1082 388 362 93 51 chr13 65151513 65151845 -55132467 + ORR1E LTR MaLR 3 348 -11 2 1082 297 247 12 94 chr13 65154309 65154325 -55129987 - B4 SINE B4 -128 164 153 2 1082 910 67 0 22 chr13 65154325 65154462 -55129850 + (TAG)n Simple_repeat Simple_repeat 2 135 0 2 1082 297 247 12 94 chr13 65154462 65154530 -55129782 - B4 SINE B4 -140 152 87 2 1082 1759 209 86 8 chr13 65154532 65154893 -55129419 + MT2A LTR ERVL 74 462 -71 2 1082 2327 205 52 24 chr13 65154893 65155419 -55128893 + Lx7 LINE L1 6788 7311 -385 2 1082 1858 181 55 9 chr13 65155534 65155879 -55128433 + MTC LTR MaLR 1 361 -60 2 1082 1642 254 35 88 chr13 65155879 65156663 -55127649 + RMER12 LTR ERVK 1 747 -1101 2 1082 2768 52 7 148 chr13 65156784 65157238 -55127074 - RLTR10 LTR ERVK 0 390 1 2 1082 13162 35 2 3 chr13 65157240 65159113 -55125199 - RLTR10-int LTR ERVK -3 1984 41 2 1082 2773 54 7 148 chr13 65159123 65159577 -55124735 - RLTR10 LTR ERVK 0 390 1 2 1082 2618 159 91 88 chr13 65159577 65159651 -55124661 + RLTR22_Mur LTR ERVK 45 108 -1740 2 1082 4935 56 14 2 chr13 65159651 65160226 -55124086 - MT2B2 LTR ERVL 0 584 3 2 1082 2618 159 91 88 chr13 65160226 65160691 -55123621 + RLTR22_Mur LTR ERVK 109 588 -1260 2 1082 1226 68 0 0 chr13 65160691 65160837 -55123475 - B1_Mm SINE Alu 0 147 2 2 1082 2618 159 91 88 chr13 65160837 65160953 -55123359 + RLTR22_Mur LTR ERVK 589 703 -1145 2 1082 230 174 65 0 chr13 65163248 65163294 -55121018 - URR1B DNA MER1_type 0 225 177 2 1082 2630 97 19 8 chr13 65163588 65163951 -55120361 + RLTR9A LTR ERVK 2 368 0 2 1082 1064 201 152 0 chr13 65165206 65165430 -55118882 + MTC-int LTR MaLR 709 966 -292 2 1082 329 169 69 145 chr13 65165419 65165564 -55118748 + MTC-int LTR MaLR 1120 1253 -5 2 1082 2276 125 82 6 chr13 65165544 65165898 -55118414 + MTC LTR MaLR 36 416 -5 2 1082 413 287 20 75 chr13 65166049 65166196 -55118116 - B3A SINE B2 -33 165 27 2 1082 24 32 0 0 chr13 65167092 65167123 -55117189 + AT_rich Low_complexity Low_complexity 1 31 0 2 1082 237 217 45 91 chr13 65167187 65167253 -55117059 - PB1 SINE Alu 0 127 65 2 1082 256 259 0 0 chr13 65167707 65167765 -55116547 + GA-rich Low_complexity Low_complexity 2 59 0 2 1082 297 240 73 46 chr13 65168233 65168342 -55115970 - PB1D10 SINE Alu -1 116 5 2 1082 494 261 244 0 chr13 65168719 65168899 -55115413 - ID_B1 SINE B4 0 224 1 2 1082 341 289 16 9 chr13 65171182 65171292 -55113020 + PB1D10 SINE Alu 1 111 -6 2 1082 318 132 0 0 chr13 65171789 65171842 -55112470 + (GGA)n Simple_repeat Simple_repeat 2 54 0 2 1082 1282 292 140 21 chr13 65172341 65172856 -55111456 + Lx8 LINE L1 6898 7473 0 2 1082 437 257 72 12 chr13 65172864 65172998 -55111314 + PB1D7 SINE Alu 5 143 -6 2 1082 474 333 47 13 chr13 65174425 65174574 -55109738 - RSINE1 SINE B4 -10 155 2 2 1082 181 359 29 19 chr13 65175396 65175501 -55108811 + MER5B DNA MER1_type 64 169 -9 2 1082 21 36 0 0 chr13 65175544 65175572 -55108740 + AT_rich Low_complexity Low_complexity 1 28 0 2 1082 320 304 0 0 chr13 65176024 65176093 -55108219 + PB1D9 SINE Alu 1 69 -51 2 1082 528 208 0 0 chr13 65176608 65176709 -55107603 - ID_B1 SINE B4 -3 221 121 2 1082 361 261 89 20 chr13 65177149 65177322 -55106990 - B3 SINE B2 -1 194 1 2 1082 221 135 55 55 chr13 65177612 65177667 -55106645 + PB1D9 SINE Alu 66 120 0 2 1082 636 14 0 0 chr13 65177855 65177928 -55106384 + (GGGGA)n Simple_repeat Simple_repeat 3 75 0 2 1082 219 255 78 0 chr13 65177929 65177980 -55106332 + ID4 SINE ID 11 65 -18 2 1082 558 101 105 57 chr13 65178864 65178969 -55105343 + RLTR11B LTR ERVK 342 451 -2 2 1082 477 0 0 0 chr13 65179047 65179100 -55105212 + (CATA)n Simple_repeat Simple_repeat 4 56 0 2 1082 282 247 183 0 chr13 65179427 65179520 -55104792 + ID_B1 SINE B4 81 190 -34 2 1082 577 140 190 37 chr13 65180479 65180642 -55103670 - RMER12 LTR ERVK 0 1322 1135 2 1082 5462 130 25 77 chr13 65180630 65181329 -55102983 - RMER12 LTR ERVK -220 1352 317 2 1082 3983 83 23 32 chr13 65181329 65181928 -55102384 + Lx LINE L1 6061 6654 0 2 1082 5462 116 17 77 chr13 65181928 65182242 -55102070 - RMER12 LTR ERVK -1006 316 1 2 1082 567 43 0 0 chr13 65182897 65182967 -55101345 + (TTCC)n Simple_repeat Simple_repeat 4 73 0 2 1082 20361 131 136 17 chr13 65183050 65184413 -55099899 + Lx4B LINE L1 587 2049 -3828 2 1082 270 0 0 0 chr13 65184413 65184443 -55099869 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1082 20361 114 186 21 chr13 65184443 65184909 -55099403 + Lx4B LINE L1 2050 2512 -3365 2 1082 1058 78 28 0 chr13 65184909 65185050 -55099262 + B1_Mus2 SINE Alu 3 147 0 2 1082 20361 118 167 21 chr13 65185050 65188373 -55095939 + Lx4B LINE L1 2513 6480 -578 2 1082 21 0 0 0 chr13 65188764 65188785 -55095527 + AT_rich Low_complexity Low_complexity 1 21 0 2 1082 216 231 0 0 chr13 65189060 65189099 -55095213 + B3A SINE B2 3 41 -157 2 1082 2355 70 0 30 chr13 65189099 65189437 -55094875 + L1Md_F2 LINE L1 6236 6563 -19 2 1082 207 0 0 0 chr13 65189440 65189463 -55094849 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 1082 183 80 0 0 chr13 65189500 65189525 -55094787 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1082 523 311 18 36 chr13 65189525 65189692 -55094620 + B3A SINE B2 27 190 -8 2 1082 5503 134 33 11 chr13 65189719 65191244 -55093068 + L1Md_F LINE L1 522 2081 -3802 2 1082 713 321 5 13 chr13 65191353 65191577 -55092735 - Lx7 LINE L1 -389 7307 7086 2 1082 809 214 0 0 chr13 65191579 65191724 -55092588 + Lx7 LINE L1 6949 7093 -603 2 1082 661 256 135 51 chr13 65192145 65192515 -55091797 + L1MC1 LINE L1 5296 5696 -637 2 1082 201 74 0 0 chr13 65192559 65192586 -55091726 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1082 234 236 138 11 chr13 65192611 65192705 -55091607 + L1MC1 LINE L1 5859 5964 -369 2 1082 3238 155 126 25 chr13 65193002 65193602 -55090710 + L1VL4 LINE L1 415 1087 -2528 2 1082 1340 66 49 0 chr13 65193602 65193785 -55090527 + B2_Mm1t SINE B2 2 193 0 2 1082 3238 134 26 61 chr13 65193785 65194004 -55090308 + L1VL4 LINE L1 1088 1287 -2328 2 1082 1443 59 11 11 chr13 65194004 65194191 -55090121 + B2_Mm2 SINE B2 2 188 -7 2 1082 3238 134 26 61 chr13 65194191 65194425 -55089887 + L1VL4 LINE L1 1288 1533 -2082 2 1082 802 120 8 31 chr13 65194596 65194725 -55089587 + L1_Mur2 LINE L1 151 276 -6436 2 1082 1298 48 6 0 chr13 65194725 65194890 -55089422 - ORR1A0 LTR MaLR 0 346 181 2 1082 244 152 68 0 chr13 65194890 65194949 -55089363 + Lx4A LINE L1 6996 7058 0 2 1082 255 299 54 52 chr13 65194958 65195045 -55089267 + L1M2 LINE L1 3054 3142 -2738 2 1082 249 108 0 0 chr13 65195045 65195082 -55089230 + (TATG)n Simple_repeat Simple_repeat 2 38 0 2 1082 397 281 37 52 chr13 65195082 65195345 -55088967 + L1M2 LINE L1 3143 3436 -2707 2 1082 1438 145 22 9 chr13 65195512 65195742 -55088570 + MTC LTR MaLR 1 233 -188 2 1082 552 194 127 37 chr13 65196153 65196287 -55088025 - B1_Mm SINE Alu 0 147 2 2 1082 655 254 55 45 chr13 65196485 65196687 -55087625 + B3 SINE B2 3 206 -10 2 1082 516 227 106 43 chr13 65197157 65197318 -55086994 - ORR1D2 LTR MaLR 0 370 200 2 1082 1704 168 14 97 chr13 65197348 65197698 -55086614 + ORR1A4 LTR MaLR 1 321 -8 2 1082 553 195 11 28 chr13 65197686 65197842 -55086470 - ORR1D2-int LTR MaLR -18 1562 1253 2 1082 757 164 21 28 chr13 65197842 65197986 -55086326 + B1_Mur3 SINE Alu 1 143 -6 2 1082 931 59 8 1 chr13 65197986 65198117 -55086195 + B1_Mus2 SINE Alu 16 142 -5 2 1082 1486 268 128 107 chr13 65198148 65198766 -55085546 - ORR1D2-int LTR MaLR -112 1258 628 2 1082 700 195 92 26 chr13 65198788 65198932 -55085380 + URR1B DNA MER1_type 1 154 -71 2 1082 1063 69 76 0 chr13 65198932 65199077 -55085235 + B2_Mm2 SINE B2 2 157 -38 2 1082 475 216 14 204 chr13 65199083 65199304 -55085008 - ORR1D2-int LTR MaLR -727 643 465 2 1082 2409 85 60 0 chr13 65200137 65200489 -55083823 + L1_Mus3 LINE L1 6265 6637 -1 2 1082 447 215 38 0 chr13 65200693 65200772 -55083540 + PB1D7 SINE Alu 9 90 -30 2 1082 201 159 0 0 chr13 65200779 65200823 -55083489 + T-rich Low_complexity Low_complexity 1 44 0 2 1082 1177 68 0 0 chr13 65200834 65200981 -55083331 - B1_Mus2 SINE Alu 0 147 1 2 1082 301 238 128 37 chr13 65201153 65201262 -55083050 - Lx8 LINE L1 -6 7467 7349 2 1082 559 240 93 7 chr13 65201276 65201427 -55082885 - MTC LTR MaLR -52 369 206 2 1082 907 304 184 50 chr13 65201427 65202202 -55082110 - RMER1C Other Other -434 908 30 2 1082 397 273 9 18 chr13 65202343 65202455 -55081857 - Lx8 LINE L1 -162 7311 7201 2 1082 423 0 0 0 chr13 65203205 65203252 -55081060 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 2 1082 1099 103 6 0 chr13 65203253 65203409 -55080903 - B2_Mm2 SINE B2 -37 158 2 2 1082 6167 157 58 22 chr13 65203470 65204830 -55079482 + L1VL4 LINE L1 236 1657 -1902 2 1082 192 40 0 0 chr13 65204830 65204855 -55079457 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2 1082 6167 140 26 15 chr13 65204855 65205228 -55079084 + L1VL4 LINE L1 1658 2033 -1526 2 1082 281 221 189 8 chr13 65205249 65205381 -55078931 + L1MB2 LINE L1 6006 6161 -10 2 1082 667 97 18 0 chr13 65205382 65205496 -55078816 + (GA)n Simple_repeat Simple_repeat 2 117 0 2 1082 219 133 0 0 chr13 65205682 65205727 -55078585 + (T)n Simple_repeat Simple_repeat 1 45 0 2 1082 1297 229 86 28 chr13 65207016 65207343 -55076969 + MTD LTR MaLR 1 346 -73 2 1082 1092 158 217 0 chr13 65207354 65207607 -55076705 + ORR1D1 LTR MaLR 10 317 -57 2 1082 247 206 87 14 chr13 65207660 65207729 -55076583 + ORR1D1 LTR MaLR 301 374 0 2 1082 326 183 17 0 chr13 65207729 65207789 -55076523 + MTD LTR MaLR 359 419 0 2 1082 220 268 0 18 chr13 65208360 65208417 -55075895 - ID4_ SINE ID -17 66 11 2 1082 201 224 26 130 chr13 65208784 65208861 -55075451 - MIR SINE MIR -112 150 82 2 1082 361 246 98 75 chr13 65209154 65209533 -55074779 + RLTR15 LTR ERVK 48 564 -4 2 1082 494 292 131 31 chr13 65210077 65210268 -55074044 + MER2 DNA MER2_type 2 211 -134 2 1082 522 168 129 0 chr13 65210325 65210480 -55073832 - RCHARR1 DNA MER1_type -85 889 715 2 1082 938 195 71 5 chr13 65210822 65211018 -55073294 + B3 SINE B2 3 211 -5 2 1082 25 65 0 0 chr13 65211063 65211109 -55073203 + AT_rich Low_complexity Low_complexity 1 46 0 2 1082 344 341 58 43 chr13 65211952 65212090 -55072222 + B4A SINE B4 2 141 -151 3 1082 989 48 0 0 chr13 65212093 65212218 -55072094 + B1_Mm SINE Alu 1 125 -22 3 1082 429 237 41 10 chr13 65212236 65212334 -55071978 + B4A SINE B4 127 227 -65 3 1082 380 37 0 0 chr13 65214545 65214599 -55069713 - L1_Mus3 LINE L1 -6 6632 6579 3 1082 214 220 15 92 chr13 65214733 65214798 -55069514 + ID4 SINE ID 11 70 -13 3 1082 334 330 26 44 chr13 65214857 65214971 -55069341 - B1F1 SINE Alu -36 113 2 3 1082 335 222 144 45 chr13 65215061 65215193 -55069119 - RLTR24 LTR ERV1 0 529 385 3 1082 609 254 34 11 chr13 65215699 65215874 -55068438 + B3A SINE B2 2 180 -18 3 1082 317 275 22 156 chr13 65215975 65216199 -55068113 - B3A SINE B2 0 198 5 3 1082 632 248 14 21 chr13 65216214 65216358 -55067954 - B1_Mur2 SINE Alu -1 148 6 3 1082 44 20 0 0 chr13 65216368 65216419 -55067893 + AT_rich Low_complexity Low_complexity 1 51 0 3 1082 565 333 26 0 chr13 65216435 65216588 -55067724 - RSINE1 SINE B4 -6 159 3 3 1082 1062 108 73 22 chr13 65217011 65217190 -55067122 + B2_Mm2 SINE B2 2 189 -6 3 1082 396 286 97 8 chr13 65217242 65217376 -55066936 + B1_Mus2 SINE Alu 2 147 0 3 1082 778 182 42 7 chr13 65218264 65218408 -55065904 + B1_Mur2 SINE Alu 1 149 0 3 1082 329 58 19 0 chr13 65218408 65218460 -55065852 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 3 1082 390 291 9 43 chr13 65218963 65218979 -55065333 - PB1D7 SINE Alu -1 119 108 3 1082 1010 133 6 0 chr13 65218979 65219152 -55065160 + (TTTC)n Simple_repeat Simple_repeat 3 176 0 3 1082 443 274 0 1 chr13 65219152 65219250 -55065062 - B1F1 SINE Alu -13 107 9 3 1082 1071 126 6 6 chr13 65219427 65219595 -55064717 - URR1A DNA MER1_type 0 226 59 3 1082 2484 100 24 5 chr13 65219865 65220238 -55064074 + L1_Mus3 LINE L1 6253 6632 -6 3 1082 333 260 12 25 chr13 65220332 65220433 -55063879 + PB1D10 SINE Alu 5 104 -16 3 1082 297 51 0 0 chr13 65220433 65220472 -55063840 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1082 427 324 34 19 chr13 65220533 65220741 -55063571 - L1MB3 LINE L1 -86 6097 5887 3 1082 565 247 63 43 chr13 65220805 65221059 -55063253 - L1M4 LINE L1 -431 5743 5485 3 1082 763 243 124 0 chr13 65221158 65221343 -55062969 + B3 SINE B2 3 210 -6 3 1082 1008 72 58 0 chr13 65221346 65221485 -55062827 + B1_Mus2 SINE Alu 1 147 0 3 1082 216 0 0 0 chr13 65221485 65221509 -55062803 + (A)n Simple_repeat Simple_repeat 1 24 0 3 1082 4650 123 50 3 chr13 65221909 65222644 -55061668 + Lx3B LINE L1 6199 6968 -5 3 1082 410 220 60 0 chr13 65223139 65223239 -55061073 + Lx2B LINE L1 6892 6997 -3 3 1082 221 28 83 0 chr13 65223296 65223332 -55060980 + (TTTTG)n Simple_repeat Simple_repeat 3 41 0 3 1082 352 179 0 0 chr13 65223894 65223950 -55060362 - B1F1 SINE Alu -7 142 87 3 1082 585 0 0 0 chr13 65223958 65224023 -55060289 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1082 311 315 9 44 chr13 65224221 65224334 -55059978 - L1MD LINE L1 -1188 4958 4850 3 1082 269 365 35 0 chr13 65224362 65224447 -55059865 + PB1D7 SINE Alu 27 114 -6 3 1082 856 313 83 31 chr13 65224511 65225026 -55059286 + L1MB3 LINE L1 5499 6040 -143 3 1082 258 81 0 0 chr13 65225026 65225063 -55059249 + (TTTTC)n Simple_repeat Simple_repeat 2 38 0 3 1082 1131 74 0 0 chr13 65225065 65225213 -55059099 - B1_Mus1 SINE Alu 0 148 1 3 1082 237 208 125 0 chr13 65225615 65225687 -55058625 - Zaphod DNA Tip100 -79 3952 3872 3 1082 1449 50 22 0 chr13 65225808 65225989 -55058323 - B2_Mm1a SINE B2 -8 185 1 3 1082 21 0 0 0 chr13 65225998 65226019 -55058293 + AT_rich Low_complexity Low_complexity 1 21 0 3 1082 396 220 110 0 chr13 65226646 65226746 -55057566 + MTE2b LTR MaLR 267 377 -2 3 1082 32 26 0 0 chr13 65226901 65226940 -55057372 + AT_rich Low_complexity Low_complexity 1 39 0 3 1082 672 97 7 2 chr13 65226993 65227110 -55057202 + B1_Mus1 SINE Alu 1 120 0 3 1082 225 128 0 0 chr13 65227687 65227734 -55056578 + (TCTA)n Simple_repeat Simple_repeat 1 47 0 3 1082 657 118 0 0 chr13 65227734 65227844 -55056468 - Lx3A LINE L1 -2 6979 6870 3 1082 3152 98 36 15 chr13 65227908 65228382 -55055930 - Lx3A LINE L1 -74 6907 6424 3 1082 769 129 21 3 chr13 65228867 65229007 -55055305 + B2_Mm2 SINE B2 7 155 -61 3 1082 7696 96 4 12 chr13 65229022 65230418 -55053894 - L1_Mus3 LINE L1 -2 6636 5261 3 1082 1189 104 12 0 chr13 65230418 65230591 -55053721 - B2_Mm2 SINE B2 -19 176 2 3 1082 4331 122 0 42 chr13 65230591 65230653 -55053659 - L1_Mus3 LINE L1 -623 5260 5205 3 1082 3423 80 0 0 chr13 65230654 65231119 -55053193 - L1_Mus3 LINE L1 -1419 4464 4000 3 1082 1047 141 12 0 chr13 65231119 65231282 -55053030 - Lx5 LINE L1 -577 6473 6309 3 1082 1874 153 3 67 chr13 65231286 65231629 -55052683 - ORR1A4 LTR MaLR -8 321 1 3 1082 6382 104 30 128 chr13 65231629 65232877 -55051435 - ORR1A4-int LTR MaLR 0 1963 838 3 1082 3974 82 4 7 chr13 65232894 65233436 -55050876 - L1Md_F2 LINE L1 0 6582 6043 3 1082 21 0 0 0 chr13 65233500 65233521 -55050791 + AT_rich Low_complexity Low_complexity 1 21 0 3 1082 4231 162 28 19 chr13 65233521 65234309 -55050003 - Lx3C LINE L1 -2 6974 6180 3 1082 14533 164 58 50 chr13 65234696 65235898 -55048414 - Lx3C LINE L1 -780 6196 4970 3 1082 1250 74 0 38 chr13 65235898 65235918 -55048394 - B2_Mm2 SINE B2 -19 176 162 3 1082 486 49 0 0 chr13 65235918 65235979 -55048333 + (TTTA)n Simple_repeat Simple_repeat 1 61 0 3 1082 1250 74 0 38 chr13 65235979 65236141 -55048171 - B2_Mm2 SINE B2 -34 161 1 3 1082 14533 188 91 79 chr13 65236141 65236389 -55047923 - Lx3C LINE L1 -917 4969 4736 3 1082 303 28 0 0 chr13 65236389 65236425 -55047887 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 3 1082 14533 188 91 79 chr13 65236425 65236513 -55047799 - Lx3C LINE L1 -1151 4735 4634 3 1082 230 0 33 0 chr13 65236513 65236543 -55047769 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 1082 14533 188 91 79 chr13 65236543 65239241 -55045071 - Lx3C LINE L1 -1253 4633 1741 3 1082 235 362 12 0 chr13 65240474 65240554 -55043758 - ID4_ SINE ID -1 82 2 3 1082 1299 86 21 0 chr13 65240564 65240751 -55043561 - B2_Mm2 SINE B2 -3 192 2 3 1082 21 0 0 0 chr13 65242308 65242329 -55041983 + AT_rich Low_complexity Low_complexity 1 21 0 3 1082 341 286 33 26 chr13 65242383 65242534 -55041778 - L1MC LINE L1 -3082 3064 2913 3 1082 33 0 0 0 chr13 65242537 65242570 -55041742 + AT_rich Low_complexity Low_complexity 1 33 0 3 1082 225 222 35 53 chr13 65243148 65243262 -55041050 - L1MA7 LINE L1 0 6291 6180 3 1082 1030 284 57 17 chr13 65244201 65244502 -55039810 - MTE2b LTR MaLR -66 313 1 3 1082 38 68 0 0 chr13 65244767 65244840 -55039472 + AT_rich Low_complexity Low_complexity 1 73 0 3 1082 469 83 22 67 chr13 65246952 65247042 -55037270 + Lx LINE L1 6568 6653 -1 3 1082 1934 76 14 0 chr13 65247285 65247576 -55036736 - MusHAL1 LINE L1 -626 2086 1792 3 1082 402 74 0 0 chr13 65247576 65247630 -55036682 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 3 1082 1220 55 6 0 chr13 65247634 65247797 -55036515 - L1_Mus1 LINE L1 0 6567 6404 3 1082 1288 106 0 0 chr13 65247798 65247977 -55036335 - L1VL2 LINE L1 -5980 355 177 3 1082 3417 123 11 6 chr13 65248053 65248599 -55035713 - L1_Mur2 LINE L1 -1320 4557 4009 3 1082 9627 109 13 10 chr13 65248721 65250174 -55034138 - Lx2B LINE L1 0 7000 5547 3 1082 3631 157 25 14 chr13 65250169 65250820 -55033492 + Lx2B LINE L1 4883 5540 -337 3 1082 24 32 0 0 chr13 65250941 65250972 -55033340 + AT_rich Low_complexity Low_complexity 1 31 0 3 1082 481 371 85 41 chr13 65252476 65252816 -55031496 + MLT1D LTR MaLR 6 360 -145 3 1082 261 350 0 0 chr13 65253081 65253161 -55031151 - ID4_ SINE ID -2 81 2 3 1082 27 29 0 0 chr13 65254577 65254611 -55029701 + AT_rich Low_complexity Low_complexity 1 34 0 3 1082 36 40 0 0 chr13 65254843 65254893 -55029419 + AT_rich Low_complexity Low_complexity 1 50 0 3 1082 417 268 34 46 chr13 65255228 65255383 -55028929 - L1ME3B LINE L1 -401 5839 5689 3 1082 192 77 0 0 chr13 65255383 65255409 -55028903 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1082 417 307 137 33 chr13 65255409 65255725 -55028587 - L1ME3B LINE L1 -476 5688 5327 3 1082 2358 139 16 254 chr13 65255760 65256607 -55027705 + RMER6A LTR ERVK 111 756 0 3 1082 225 227 45 0 chr13 65256610 65256676 -55027636 - L1MD LINE L1 -893 5253 5185 3 1082 2592 150 47 33 chr13 65256678 65257168 -55027144 - RLTR19 LTR ERVK -2 497 1 3 1082 4092 71 0 7 chr13 65257198 65257735 -55026577 + L1Md_F2 LINE L1 6046 6578 -4 3 1082 410 320 59 93 chr13 65257901 65258256 -55026056 - L1MC LINE L1 -1046 5100 4758 3 1082 1011 66 36 0 chr13 65258533 65258670 -55025642 + B1_Mm SINE Alu 6 147 0 3 1082 30 0 0 0 chr13 65258671 65258701 -55025611 + AT_rich Low_complexity Low_complexity 1 30 0 3 1082 335 282 44 82 chr13 65258788 65258923 -55025389 + MLT1E2 LTR MaLR 1 130 -497 3 1082 307 136 14 43 chr13 65258935 65259004 -55025308 - RMER30 DNA MER1_type -51 151 85 3 1082 225 65 0 0 chr13 65259026 65259057 -55025255 + (TATG)n Simple_repeat Simple_repeat 2 32 0 3 1082 341 238 0 111 chr13 65259341 65259431 -55024881 - Lx9 LINE L1 -1164 6480 6401 3 1082 28 0 0 0 chr13 65259432 65259460 -55024852 + AT_rich Low_complexity Low_complexity 1 28 0 3 1082 1089 0 0 0 chr13 65259712 65259833 -55024479 + (GAAA)n Simple_repeat Simple_repeat 4 124 0 3 1082 1560 210 221 18 chr13 65259900 65260462 -55023850 - Lx9 LINE L1 -1263 6381 5706 3 1082 1582 37 5 10 chr13 65261009 65261202 -55023110 + B2_Mm1a SINE B2 2 193 0 3 1082 5178 210 110 19 chr13 65261827 65262912 -55021400 + RMER12B LTR ERVK 1 1179 -225 3 1082 261 0 0 0 chr13 65262912 65262941 -55021371 + (TC)n Simple_repeat Simple_repeat 2 30 0 3 1082 423 0 0 0 chr13 65262941 65262987 -55021325 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1082 5178 210 110 19 chr13 65262987 65263187 -55021125 + RMER12B LTR ERVK 1180 1403 -1 3 1082 317 247 85 20 chr13 65263224 65263377 -55020935 + L1MA9 LINE L1 6038 6200 -112 3 1082 641 256 64 43 chr13 65263643 65263670 -55020642 - B3 SINE B2 -24 192 165 3 1082 570 67 0 0 chr13 65263670 65263745 -55020567 + (TTTA)n Simple_repeat Simple_repeat 3 77 0 4 1082 1241 62 0 0 chr13 65263745 65263905 -55020407 - B2_Mm1t SINE B2 -33 160 1 4 1082 1177 75 0 0 chr13 65264263 65264410 -55019902 + B1_Mus1 SINE Alu 1 147 -1 4 1082 207 0 0 0 chr13 65265055 65265078 -55019234 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 1082 344 347 117 58 chr13 65265391 65265596 -55018716 + B4A SINE B4 1 217 -75 4 1082 433 348 92 4 chr13 65265704 65265955 -55018357 - L1ME3B LINE L1 -285 5955 5683 4 1082 223 187 21 42 chr13 65266440 65266535 -55017777 + (TTAGGG)n Simple_repeat Simple_repeat 5 97 0 4 1082 327 258 42 31 chr13 65266766 65266862 -55017450 + RLTR42-int LTR ERVK 1696 1792 -3730 4 1082 201 94 0 0 chr13 65266987 65267019 -55017293 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 4 1082 22 94 0 0 chr13 65267582 65267646 -55016666 + AT_rich Low_complexity Low_complexity 1 64 0 4 1082 360 111 0 0 chr13 65267939 65267993 -55016319 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 1082 25396 71 10 2 chr13 65269063 65273169 -55011143 + L1_Mus4 LINE L1 2499 6636 0 4 1082 442 315 23 8 chr13 65273176 65273304 -55011008 - B3 SINE B2 -17 199 70 4 1082 397 261 14 21 chr13 65273391 65273532 -55010780 - Lx9 LINE L1 -172 7472 7333 4 1082 326 274 0 0 chr13 65273763 65273836 -55010476 - ID_B1 SINE B4 -65 159 87 4 1083 423 0 0 0 chr13 65274242 65274289 -55010023 + (TTA)n Simple_repeat Simple_repeat 2 48 0 4 1083 1110 90 0 0 chr13 65274289 65274433 -55009879 - B1_Mus1 SINE Alu -3 145 2 4 1083 479 240 0 39 chr13 65274434 65274538 -55009774 - PB1D10 SINE Alu -1 116 17 4 1083 484 269 0 0 chr13 65275000 65275108 -55009204 - PB1D10 SINE Alu -1 116 9 4 1083 42 0 0 0 chr13 65275185 65275227 -55009085 + AT_rich Low_complexity Low_complexity 1 42 0 4 1083 2021 208 28 5 chr13 65275602 65276032 -55008280 + BGLII_B LTR ERVK 2 441 0 4 1083 300 127 11 54 chr13 65276438 65276530 -55007782 + (TA)n Simple_repeat Simple_repeat 2 89 0 4 1083 304 244 0 47 chr13 65276904 65276990 -55007322 + B1F SINE Alu 1 82 -67 4 1083 400 112 12 24 chr13 65277772 65277854 -55006458 + (TCTCCC)n Simple_repeat Simple_repeat 5 85 0 4 1083 402 85 0 0 chr13 65278321 65278380 -55005932 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1083 727 214 30 76 chr13 65279031 65279228 -55005084 - B3A SINE B2 -10 188 1 4 1083 713 216 176 0 chr13 65279375 65279551 -55004761 + B3 SINE B2 1 207 -9 4 1083 611 247 200 25 chr13 65279606 65279851 -55004461 - B4A SINE B4 0 292 5 4 1083 242 115 19 0 chr13 65280101 65280153 -55004159 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1083 1053 297 56 22 chr13 65280182 65280540 -55003772 - ORR1D2 LTR MaLR 0 370 1 4 1083 439 250 207 24 chr13 65281059 65281194 -55003118 - RMER30 DNA MER1_type -1 201 35 4 1083 744 43 0 0 chr13 65281194 65281286 -55003026 + (TG)n Simple_repeat Simple_repeat 1 92 0 4 1083 439 250 207 24 chr13 65281286 65281314 -55002998 - RMER30 DNA MER1_type -168 34 8 4 1083 760 293 16 68 chr13 65281382 65281690 -55002622 + B4 SINE B4 1 292 0 4 1083 532 227 27 114 chr13 65281898 65282082 -55002230 - Tigger5 DNA MER2_type -99 2307 2140 4 1083 36 0 0 0 chr13 65282282 65282318 -55001994 + AT_rich Low_complexity Low_complexity 1 36 0 4 1083 701 279 84 40 chr13 65282457 65282730 -55001582 - B4 SINE B4 -4 288 4 4 1083 236 341 108 0 chr13 65283224 65283353 -55000959 + MLT1H LTR MaLR 100 242 -307 4 1083 640 268 30 6 chr13 65283363 65283532 -55000780 + MLT1B LTR MaLR 1 173 -217 4 1083 335 331 85 14 chr13 65283551 65283692 -55000620 + MLT1B LTR MaLR 301 451 -16 4 1083 216 250 16 0 chr13 65283766 65283830 -55000482 + (TCCA)n Simple_repeat Simple_repeat 2 66 0 4 1083 785 159 227 0 chr13 65283946 65284122 -55000190 - B3 SINE B2 0 216 1 4 1083 181 323 106 48 chr13 65284135 65284239 -55000073 - L3 LINE CR1 -1405 3084 2975 4 1083 742 249 11 22 chr13 65284606 65284787 -54999525 + B3A SINE B2 1 179 -19 4 1083 338 283 0 0 chr13 65285062 65285154 -54999158 - Lx7 LINE L1 -395 7301 7210 4 1083 586 369 22 56 chr13 65285691 65286010 -54998302 + ORR1E LTR MaLR 9 316 -43 4 1083 727 302 35 90 chr13 65286767 65287167 -54997145 - MTE2a LTR MaLR -1 378 1 4 1083 412 325 63 42 chr13 65287505 65287743 -54996569 - MER2 DNA MER2_type -12 333 91 4 1083 283 317 23 58 chr13 65287780 65287867 -54996445 - RSINE1 SINE B4 0 165 82 4 1083 258 323 0 15 chr13 65287886 65287952 -54996360 - PB1D10 SINE Alu -37 80 16 4 1083 288 0 0 0 chr13 65287964 65287996 -54996316 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1083 442 313 119 5 chr13 65288010 65288189 -54996123 - B3A SINE B2 -27 189 8 4 1083 1856 223 70 45 chr13 65288189 65288658 -54995654 + RLTR26 LTR ERVK 1 481 -161 4 1083 225 295 157 42 chr13 65289039 65289230 -54995082 - B3 SINE B2 0 216 4 4 1083 535 272 136 0 chr13 65290583 65290752 -54993560 - B3 SINE B2 -1 215 24 4 1083 587 228 18 0 chr13 65290869 65290983 -54993329 - RSINE1 SINE B4 -46 119 4 4 1083 746 292 51 140 chr13 65291070 65291484 -54992828 + MTE2a LTR MaLR 1 377 -2 4 1083 266 372 74 20 chr13 65291815 65292018 -54992294 + MER20 DNA MER1_type 4 217 -2 4 1083 766 282 14 9 chr13 65292335 65292550 -54991762 + B3 SINE B2 1 216 0 4 1083 195 328 96 24 chr13 65292978 65293103 -54991209 + MIRc SINE MIR 34 167 -101 4 1083 416 322 42 7 chr13 65293116 65293260 -54991052 - RSINE1 SINE B4 -14 151 3 4 1083 233 367 55 0 chr13 65293370 65293430 -54990882 - B4A SINE B4 -144 148 87 4 1083 207 0 0 0 chr13 65293430 65293453 -54990859 + (TTTG)n Simple_repeat Simple_repeat 4 26 0 4 1083 233 367 55 0 chr13 65293453 65293501 -54990811 - B4A SINE B4 -206 86 35 4 1083 278 321 12 0 chr13 65293832 65293913 -54990399 + ID4_ SINE ID 2 83 0 4 1083 1245 27 7 0 chr13 65293941 65294087 -54990225 + B1_Mm SINE Alu 1 147 0 4 1083 350 281 8 81 chr13 65294143 65294267 -54990045 - PB1D7 SINE Alu -5 115 1 4 1083 524 309 122 17 chr13 65294289 65294470 -54989842 - ID_B1 SINE B4 -23 201 2 4 1083 448 259 37 0 chr13 65294537 65294645 -54989667 + PB1D9 SINE Alu 1 112 -8 4 1083 392 281 96 52 chr13 65294768 65294903 -54989409 + B3A SINE B2 57 197 -1 4 1083 297 260 7 64 chr13 65295057 65295197 -54989115 - Lx9 LINE L1 -127 7517 7386 4 1083 23 0 0 0 chr13 65296968 65296991 -54987321 + AT_rich Low_complexity Low_complexity 1 23 0 4 1083 626 251 159 16 chr13 65297244 65297426 -54986886 + B3 SINE B2 1 208 -8 4 1083 252 317 53 76 chr13 65297461 65297686 -54986626 + L1MEg LINE L1 994 1213 -4871 4 1083 918 102 8 0 chr13 65297810 65297937 -54986375 - B1_Mus2 SINE Alu -19 128 1 4 1083 282 323 0 0 chr13 65298051 65298113 -54986199 - B4A SINE B4 -8 284 223 4 1083 2281 85 27 0 chr13 65298128 65298494 -54985818 + L1_Mur1 LINE L1 923 1298 -5686 4 1083 7735 77 2 3 chr13 65298490 65299589 -54984723 + L1_Mur1 LINE L1 4704 5801 -85 4 1083 1144 68 0 0 chr13 65299590 65299737 -54984575 + B1_Mus2 SINE Alu 1 147 0 4 1083 657 269 33 33 chr13 65299757 65299972 -54984340 - B3 SINE B2 -1 215 1 4 1083 343 295 63 0 chr13 65300049 65300144 -54984168 - B4A SINE B4 -191 101 1 4 1083 1368 289 92 108 chr13 65300938 65301740 -54982572 + Lx6 LINE L1 6530 7318 -142 4 1083 513 156 0 0 chr13 65301743 65301839 -54982473 + CT-rich Low_complexity Low_complexity 2 97 0 4 1083 681 253 72 26 chr13 65301964 65302159 -54982153 + B4A SINE B4 78 281 -11 4 1083 884 217 11 0 chr13 65302308 65302497 -54981815 - URR1B DNA MER1_type 0 225 35 4 1083 805 246 34 15 chr13 65302564 65302770 -54981542 + B3 SINE B2 1 210 -6 4 1083 287 301 27 87 chr13 65302912 65302988 -54981324 + B1F SINE Alu 1 67 -82 4 1083 775 122 114 0 chr13 65302988 65303119 -54981193 + B1_Mus1 SINE Alu 1 146 -2 4 1083 197 33 33 0 chr13 65303119 65303149 -54981163 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 1083 287 301 27 87 chr13 65303149 65303220 -54981092 + B1F SINE Alu 68 139 -10 4 1083 528 184 0 0 chr13 65303222 65303309 -54981003 + B3 SINE B2 1 87 -129 4 1083 225 220 20 20 chr13 65303314 65303365 -54980947 + B3 SINE B2 66 116 -100 4 1083 791 257 0 42 chr13 65303356 65303547 -54980765 + B3A SINE B2 16 198 0 4 1083 292 275 54 21 chr13 65303596 65303689 -54980623 + BC1_Mm scRNA scRNA 10 105 -47 4 1083 297 258 0 0 chr13 65303932 65303994 -54980318 + B4 SINE B4 231 292 0 4 1083 265 250 27 14 chr13 65304079 65304152 -54980160 + ID2 SINE ID 1 74 -9 4 1083 406 247 0 0 chr13 65304962 65305047 -54979265 + Lx8 LINE L1 7132 7216 -257 4 1083 227 261 0 0 chr13 65305243 65305289 -54979023 + polypurine Low_complexity Low_complexity 5 50 0 4 1083 815 169 13 39 chr13 65305359 65305513 -54978799 + B1_Mur4 SINE Alu 1 150 0 4 1083 228 35 0 0 chr13 65305518 65305547 -54978765 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1083 463 193 34 11 chr13 65305561 65305650 -54978662 + PB1D9 SINE Alu 9 99 -21 4 1083 1515 58 5 0 chr13 65305714 65305904 -54978408 + B2_Mm1t SINE B2 1 191 -2 4 1083 28 0 0 0 chr13 65307359 65307387 -54976925 + GC_rich Low_complexity Low_complexity 1 28 0 4 1083 330 302 18 3 chr13 65307647 65307759 -54976553 - PB1D10 SINE Alu -34 115 1 4 1083 398 209 165 50 chr13 65307854 65307975 -54976337 + RSINE1 SINE B4 2 136 -29 4 1083 299 261 37 172 chr13 65307966 65308262 -54976050 + Tigger7 DNA MER2_type 2207 2462 -29 4 1083 26 0 0 0 chr13 65308290 65308316 -54975996 + AT_rich Low_complexity Low_complexity 1 26 0 4 1083 468 288 16 31 chr13 65308557 65308672 -54975640 + RSINE1 SINE B4 28 141 -24 5 1083 231 88 0 0 chr13 65308672 65308706 -54975606 + (CATG)n Simple_repeat Simple_repeat 3 36 0 5 1083 468 288 16 31 chr13 65308706 65308719 -54975593 + RSINE1 SINE B4 142 154 -11 5 1083 894 169 92 29 chr13 65309066 65309273 -54975039 - URR1A DNA MER1_type 0 226 7 5 1083 28 0 0 0 chr13 65309334 65309362 -54974950 + AT_rich Low_complexity Low_complexity 1 28 0 5 1083 599 241 9 0 chr13 65309363 65309479 -54974833 - RSINE1 SINE B4 -46 119 3 5 1083 319 333 25 106 chr13 65310127 65310151 -54974161 + B4 SINE B4 72 219 -73 5 1083 759 228 0 7 chr13 65310151 65310288 -54974024 + B1_Mur1 SINE Alu 7 142 -7 5 1083 266 196 149 21 chr13 65310293 65310387 -54973925 + L1M5 LINE L1 5334 5439 -740 5 1083 567 0 0 0 chr13 65310713 65310776 -54973536 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 1083 322 271 90 152 chr13 65310844 65311245 -54973067 - RMER10A LTR ERVL -62 380 5 5 1083 278 276 57 11 chr13 65311388 65311534 -54972778 + L1M5 LINE L1 5552 5710 -469 5 1083 753 243 141 20 chr13 65311535 65311883 -54972429 - Lx7 LINE L1 -1528 6168 5779 5 1083 991 279 0 33 chr13 65311886 65312190 -54972122 - Lx6 LINE L1 -605 6855 6562 5 1083 4870 172 37 13 chr13 65312189 65313131 -54971181 - Lx7 LINE L1 -88 5792 4827 5 1083 198 0 0 0 chr13 65313131 65313153 -54971159 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 5 1083 4870 172 37 13 chr13 65313153 65313272 -54971040 - Lx7 LINE L1 -1054 4826 4706 5 1083 4543 183 45 103 chr13 65313271 65313544 -54970768 - Lx7 LINE L1 -3200 2680 2468 5 1083 428 36 0 0 chr13 65313544 65313599 -54970713 + B1_Mus1 SINE Alu 2 56 -92 5 1083 4543 183 45 103 chr13 65313599 65313665 -54970647 - Lx7 LINE L1 -3200 2467 2416 5 1083 1262 60 6 0 chr13 65313665 65313833 -54970479 + (GGAA)n Simple_repeat Simple_repeat 4 172 0 5 1083 1466 28 0 6 chr13 65313834 65314014 -54970298 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 5 1083 4543 183 45 103 chr13 65314014 65315049 -54969263 - Lx7 LINE L1 -3465 2415 1332 5 1083 487 173 162 9 chr13 65315052 65315163 -54969149 - RMER19B LTR ERVK -470 432 305 5 1083 1134 69 7 0 chr13 65315535 65315680 -54968632 - B1_Mm SINE Alu -1 146 1 5 1083 531 310 67 4 chr13 65315836 65316076 -54968236 - Lx8 LINE L1 -80 7393 7139 5 1083 374 304 26 9 chr13 65316120 65316233 -54968079 - B3 SINE B2 -32 184 70 5 1083 25 0 0 0 chr13 65316382 65316407 -54967905 + AT_rich Low_complexity Low_complexity 1 25 0 5 1083 684 292 46 0 chr13 65316435 65316630 -54967682 - B3 SINE B2 -10 206 3 5 1083 249 108 0 0 chr13 65317052 65317089 -54967223 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1083 479 192 0 0 chr13 65317092 65317212 -54967100 + Lx9 LINE L1 7525 7644 0 5 1083 1971 164 15 88 chr13 65317300 65317709 -54966603 + MTB_Mm LTR MaLR 15 393 -14 5 1083 306 252 0 175 chr13 65318044 65318164 -54966148 + RMER10A LTR ERVL 324 422 -20 5 1083 221 0 0 33 chr13 65318164 65318194 -54966118 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1083 2962 146 25 47 chr13 65318424 65318629 -54965683 + RMER16 LTR ERVK 16 240 -293 5 1083 1005 92 18 12 chr13 65318629 65318795 -54965517 + L1_Mus3 LINE L1 6472 6638 0 5 1083 2962 137 29 55 chr13 65318795 65319145 -54965167 + RMER16 LTR ERVK 197 528 -5 5 1083 252 230 80 13 chr13 65319192 65319267 -54965045 + RMER15 LTR ERVL 356 435 -140 5 1083 539 56 0 0 chr13 65319268 65319339 -54964973 + Lx2A1 LINE L1 6409 6479 -529 5 1083 1070 215 112 24 chr13 65319335 65319631 -54964681 - Lx5 LINE L1 -304 6746 6425 5 1083 434 202 20 10 chr13 65319682 65319782 -54964530 + RLTR10A LTR ERVK 147 247 -164 5 1083 341 254 17 50 chr13 65319795 65319915 -54964397 + RLTR10A LTR ERVK 296 411 0 5 1083 944 192 62 9 chr13 65319915 65320125 -54964187 - Lx5 LINE L1 -615 6435 6215 5 1083 245 289 53 80 chr13 65320126 65320163 -54964149 + RMER15 LTR ERVL 422 455 -120 5 1083 4319 39 0 2 chr13 65320163 65320677 -54963635 + L1Md_T LINE L1 6070 6582 0 5 1083 245 289 53 80 chr13 65320677 65320752 -54963560 + RMER15 LTR ERVL 456 531 -44 5 1083 284 126 61 31 chr13 65320962 65321060 -54963252 + (TTAAA)n Simple_repeat Simple_repeat 2 102 0 5 1083 1108 69 21 0 chr13 65321615 65321760 -54962552 + B1_Mus1 SINE Alu 1 148 0 5 1083 221 71 119 0 chr13 65321760 65321802 -54962510 + A-rich Low_complexity Low_complexity 1 47 0 5 1083 308 349 0 45 chr13 65322031 65322208 -54962104 + CT-rich Low_complexity Low_complexity 5 173 0 5 1083 206 257 40 13 chr13 65322236 65322257 -54962055 + polypyrimidine Low_complexity Low_complexity 58 78 0 5 1083 2852 43 3 0 chr13 65322257 65322602 -54961710 - ORR1A1 LTR MaLR 0 346 1 5 1083 206 257 40 13 chr13 65322602 65322655 -54961657 + polypyrimidine Low_complexity Low_complexity 3 57 0 5 1083 299 348 31 36 chr13 65322683 65322877 -54961435 + RMER15 LTR ERVL 378 570 -5 5 1083 1689 208 30 4 chr13 65322883 65323351 -54960961 - L1_Mur3 LINE L1 -2528 3352 2873 5 1083 6735 118 9 6 chr13 65323378 65325003 -54959309 - L1_Mus3 LINE L1 -2 6636 5009 5 1083 1955 45 4 0 chr13 65325004 65325247 -54959065 + ORR1A1 LTR MaLR 103 346 0 5 1083 774 202 6 6 chr13 65325247 65325411 -54958901 - Lx4B LINE L1 -166 6892 6729 5 1083 486 257 85 7 chr13 65325416 65325557 -54958755 + MTE-int LTR MaLR 1378 1529 -51 5 1083 180 77 0 0 chr13 65325686 65325712 -54958600 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1083 857 217 26 22 chr13 65325722 65325948 -54958364 - Lx4B LINE L1 -5 7053 6827 5 1083 1370 56 79 0 chr13 65326414 65326573 -54957739 + B2_Mm1t SINE B2 2 160 -33 5 1083 222 37 0 0 chr13 65326573 65326600 -54957712 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 5 1083 1370 56 79 0 chr13 65326600 65326618 -54957694 + B2_Mm1t SINE B2 161 191 -2 5 1083 469 271 0 41 chr13 65327404 65327504 -54956808 + L1_Mur3 LINE L1 904 1003 -6725 5 1083 3237 81 59 2 chr13 65327504 65327960 -54956352 - RLTR45 LTR ERVK 0 482 1 5 1083 469 271 0 41 chr13 65327960 65328055 -54956257 + L1_Mur3 LINE L1 1004 1091 -6637 5 1083 1221 231 65 57 chr13 65328390 65328900 -54955412 + L1_Mur3 LINE L1 1323 1836 -4044 5 1083 439 296 170 108 chr13 65329854 65330289 -54954023 - MT2B LTR ERVL 0 601 72 5 1083 445 189 44 63 chr13 65330294 65330452 -54953860 + (TTAGGG)n Simple_repeat Simple_repeat 6 160 0 5 1083 2397 62 0 3 chr13 65331313 65331621 -54952691 - L1_Mus2 LINE L1 0 6566 6260 5 1083 26 93 0 0 chr13 65332248 65332323 -54951989 + AT_rich Low_complexity Low_complexity 1 75 0 5 1083 13521 25 0 0 chr13 65332734 65334283 -54950029 + L1Md_A LINE L1 4038 5586 -297 5 1083 8736 23 1 1 chr13 65334283 65335278 -54949034 + L1Md_A LINE L1 5587 6581 -1 5 1083 404 214 0 0 chr13 65335441 65335525 -54948787 + RLTR42-int LTR ERVK 4258 4341 -1181 5 1083 303 175 0 31 chr13 65336035 65336100 -54948212 + HAL1-3A_ME LINE L1 1966 2028 -830 5 1083 244 94 38 0 chr13 65336111 65336164 -54948148 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1083 26 50 0 0 chr13 65336832 65336872 -54947440 + AT_rich Low_complexity Low_complexity 1 40 0 5 1083 283 186 17 0 chr13 65337271 65337330 -54946982 - MT2A LTR ERVL -473 60 1 5 1083 2193 202 58 15 chr13 65337341 65337936 -54946376 - MERVL_2A-int LTR ERVL -11 5750 5189 5 1083 5329 201 88 29 chr13 65338951 65339898 -54944414 - L1_Mur3 LINE L1 -971 4909 3907 5 1083 1349 83 33 0 chr13 65339898 65340079 -54944233 - B2_Mm1a SINE B2 -6 187 1 5 1083 5329 201 88 29 chr13 65340079 65340535 -54943777 - L1_Mur3 LINE L1 -1974 3906 3435 5 1083 414 0 0 0 chr13 65340535 65340581 -54943731 + (TA)n Simple_repeat Simple_repeat 1 46 0 5 1083 5329 201 88 29 chr13 65340581 65340650 -54943662 - L1_Mur3 LINE L1 -2446 3434 3352 5 1083 2061 81 60 28 chr13 65340653 65340972 -54943340 - L1_Mus4 LINE L1 -5 6631 6303 5 1083 1420 189 97 62 chr13 65340973 65341345 -54942967 - RLTR41 LTR ERV1 0 446 62 5 1083 1320 75 1 13 chr13 65341364 65341557 -54942755 - L1_Mus4 LINE L1 -261 6305 6116 5 1083 596 314 74 60 chr13 65345460 65345826 -54938486 + MTD LTR MaLR 33 403 -16 5 1083 578 351 23 15 chr13 65345859 65346183 -54938129 + MTD-int LTR MaLR 6 361 -1219 5 1083 1451 238 19 3 chr13 65346224 65346549 -54937763 - Lx4B LINE L1 0 7058 6729 5 1083 438 242 90 8 chr13 65346554 65346687 -54937625 + MTD-int LTR MaLR 1378 1521 -59 5 1083 3377 174 59 11 chr13 65346849 65347547 -54936765 - Lx4B LINE L1 -5 7053 6323 5 1083 1158 95 95 0 chr13 65347671 65347840 -54936472 + B2_Mm2 SINE B2 1 185 -10 5 1083 264 181 0 0 chr13 65347915 65347982 -54936330 - B1_Mur4 SINE Alu 0 150 83 5 1083 200 186 14 28 chr13 65348297 65348369 -54935943 + (TTTG)n Simple_repeat Simple_repeat 1 71 0 5 1083 1169 48 0 27 chr13 65348371 65348521 -54935791 - B1_Mus2 SINE Alu 0 147 2 5 1083 286 356 26 0 chr13 65348525 65348640 -54935672 - B3A SINE B2 -79 119 2 5 1083 6235 222 27 67 chr13 65348736 65349390 -54934922 + MurSatRep1 Unknown Unknown 406 1015 -1122 5 1083 1165 82 0 0 chr13 65349390 65349537 -54934775 - B1_Mus1 SINE Alu 0 148 2 5 1083 6235 247 35 58 chr13 65349537 65351009 -54933303 + MurSatRep1 Unknown Unknown 1016 2137 0 5 1083 375 281 26 22 chr13 65350951 65351419 -54932893 + MMSAT4 Satellite Satellite 1 469 -9 5 1083 439 190 42 14 chr13 65351484 65351628 -54932684 - RMER17B LTR ERVK -496 462 315 5 1083 242 339 17 8 chr13 65351640 65351759 -54932553 + MMSAT4 Satellite Satellite 49 168 0 5 1083 359 326 48 44 chr13 65351725 65351953 -54932359 + MurSatRep1 Unknown Unknown 1842 2070 -67 5 1083 324 319 7 4 chr13 65352119 65352336 -54931976 + MMSAT4 Satellite Satellite 1 217 -2 5 1083 243 276 57 0 chr13 65352392 65352497 -54931815 + MMSAT4 Satellite Satellite 51 161 -7 5 1083 335 333 17 23 chr13 65352463 65352638 -54931674 + MurSatRep1 Unknown Unknown 1751 1924 -213 5 1083 1466 214 19 36 chr13 65352640 65353004 -54931308 + ORR1B1 LTR MaLR 29 386 -8 5 1083 3228 199 76 102 chr13 65353008 65354140 -54930172 + ORR1B1-int LTR MaLR 1 1102 -861 5 1083 306 194 0 56 chr13 65354137 65354208 -54930104 + ORR1B1-int LTR MaLR 1897 1963 0 5 1083 1465 161 33 127 chr13 65354208 65354459 -54929853 + ORR1B1 LTR MaLR 1 231 -98 5 1083 1557 32 27 0 chr13 65354459 65354646 -54929666 + B2_Mm1t SINE B2 2 193 0 5 1083 1465 161 33 127 chr13 65354646 65354757 -54929555 + ORR1B1 LTR MaLR 232 329 0 5 1083 250 161 0 152 chr13 65355124 65355190 -54929122 - RLTR33 LTR ERVK -156 522 467 5 1083 1694 196 38 0 chr13 65355810 65356183 -54928129 - L1_Mur3 LINE L1 -1596 4284 3898 5 1083 785 235 23 36 chr13 65356296 65356517 -54927795 + MT2B LTR ERVL 384 601 0 5 1083 379 290 24 8 chr13 65357419 65357544 -54926768 + B3 SINE B2 70 196 -20 5 1083 789 178 74 11 chr13 65358978 65359154 -54925158 + B2_Mm2 SINE B2 9 195 0 5 1083 741 182 0 0 chr13 65359221 65359364 -54924948 + (TA)n Simple_repeat Simple_repeat 2 144 0 5 1083 315 0 0 0 chr13 65359475 65359510 -54924802 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1083 457 248 6 44 chr13 65361600 65361653 -54922659 + B3A SINE B2 1 51 -147 5 1083 4465 50 18 16 chr13 65361653 65362216 -54922096 + LTRIS2 LTR ERV1 1 564 0 5 1083 457 259 9 86 chr13 65362216 65362386 -54921926 + B3A SINE B2 50 192 -3 5 1083 4298 15 4 0 chr13 65362905 65363385 -54920927 - LTRIS_Mm LTR ERV1 0 482 1 5 1083 221 271 0 0 chr13 65363591 65363661 -54920651 + B4 SINE B4 92 161 -131 5 1083 317 24 24 0 chr13 65363799 65363841 -54920471 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 5 1083 198 26 77 0 chr13 65364245 65364284 -54920028 + (CCCCCA)n Simple_repeat Simple_repeat 4 45 0 5 1083 21 36 0 0 chr13 65365755 65365783 -54918529 + AT_rich Low_complexity Low_complexity 1 28 0 6 1083 288 370 49 12 chr13 65365785 65365949 -54918363 - B3A SINE B2 -28 170 1 6 1083 802 211 25 35 chr13 65366184 65366385 -54917927 + Lx4B LINE L1 6853 7051 -7 6 1083 206 162 0 26 chr13 65366391 65366429 -54917883 + GA-rich Low_complexity Low_complexity 4 40 0 6 1083 1501 313 63 38 chr13 65366592 65367375 -54916937 - ORR1D-int LTR MaLR -7 1363 562 6 1083 6903 190 21 40 chr13 65367385 65368482 -54915830 + Lx4B LINE L1 5637 6734 -324 6 1083 896 49 180 0 chr13 65368482 65368604 -54915708 + B1_Mus1 SINE Alu 1 144 -4 6 1083 6903 190 21 40 chr13 65368604 65368952 -54915360 + Lx4B LINE L1 6735 7054 -4 6 1083 584 333 51 11 chr13 65368995 65369292 -54915020 - ORR1D-int LTR MaLR -1221 359 24 6 1083 525 178 93 0 chr13 65370281 65370388 -54913924 - ID_B1 SINE B4 0 224 108 6 1083 371 208 25 51 chr13 65370540 65370697 -54913615 + RMER17C LTR ERVK 123 275 -135 6 1083 207 0 0 0 chr13 65370698 65370721 -54913591 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1083 1263 27 0 13 chr13 65370871 65371020 -54913292 + B1_Mm SINE Alu 1 147 0 6 1083 183 42 0 0 chr13 65371025 65371049 -54913263 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 6 1083 243 304 121 29 chr13 65371735 65371942 -54912370 + L1M5 LINE L1 5676 5901 -261 6 1083 504 335 32 59 chr13 65372073 65372137 -54912175 + B3A SINE B2 1 61 -137 6 1083 1669 36 0 0 chr13 65372137 65372330 -54911982 - B2_Mm1a SINE B2 0 193 1 6 1083 504 324 55 60 chr13 65372330 65372482 -54911830 + B3A SINE B2 62 216 0 6 1083 323 269 43 0 chr13 65372527 65372620 -54911692 + ID_B1 SINE B4 128 224 0 6 1083 567 0 0 0 chr13 65372674 65372737 -54911575 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1083 1075 169 6 0 chr13 65372756 65372939 -54911373 - B3 SINE B2 -31 185 2 6 1083 348 319 41 28 chr13 65372977 65373122 -54911190 - B1F SINE Alu -1 148 2 6 1083 651 280 59 0 chr13 65373142 65373328 -54910984 + B3A SINE B2 2 198 0 6 1083 555 248 123 53 chr13 65373339 65373509 -54910803 + B3A SINE B2 1 182 -16 6 1083 26 0 0 0 chr13 65373517 65373543 -54910769 + AT_rich Low_complexity Low_complexity 1 26 0 6 1083 617 246 182 11 chr13 65373820 65374001 -54910311 - B3 SINE B2 -4 212 1 6 1083 838 291 112 65 chr13 65374077 65374551 -54909761 - MLT1D LTR MaLR -9 496 1 6 1083 231 36 0 0 chr13 65375057 65375085 -54909227 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 6 1083 338 202 152 33 chr13 65375092 65375184 -54909128 - PB1D9 SINE Alu -13 107 5 6 1083 745 270 36 55 chr13 65375256 65375530 -54908782 + MT2B LTR ERVL 277 545 -56 6 1083 498 33 0 0 chr13 65375561 65375621 -54908691 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 6 1083 687 199 50 0 chr13 65376154 65376295 -54908017 + B1_Mur1 SINE Alu 2 149 0 6 1083 410 79 0 16 chr13 65376297 65376361 -54907951 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 6 1083 490 361 13 0 chr13 65376839 65376997 -54907315 + RSINE1 SINE B4 5 164 -1 6 1083 372 119 0 0 chr13 65376998 65377057 -54907255 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 1083 850 149 6 57 chr13 65377095 65377252 -54907060 - B1_Mur4 SINE Alu -1 149 1 6 1083 699 273 35 10 chr13 65377531 65377731 -54906581 + ID_B1 SINE B4 2 206 -18 6 1083 1267 95 45 0 chr13 65377850 65378029 -54906283 + B2_Mm2 SINE B2 2 188 -7 6 1083 1111 209 36 43 chr13 65378459 65378823 -54905489 - RMER16 LTR ERVK 0 533 1 6 1083 2359 169 8 55 chr13 65378906 65379395 -54904917 - RMER4A LTR ERVK 0 466 1 6 1083 380 264 164 0 chr13 65380884 65381024 -54903288 - RSINE1 SINE B4 0 165 3 6 1083 22 0 0 0 chr13 65381032 65381054 -54903258 + AT_rich Low_complexity Low_complexity 1 22 0 6 1083 1069 66 0 7 chr13 65381066 65381204 -54903108 + B1_Mus1 SINE Alu 2 138 -10 6 1083 180 0 0 0 chr13 65381207 65381227 -54903085 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 1083 308 312 7 7 chr13 65381563 65381705 -54902607 + MurSatRep1 Unknown Unknown 607 748 -1389 6 1083 286 224 66 0 chr13 65381730 65381806 -54902506 + ID_B1 SINE B4 86 166 -58 6 1083 21152 88 14 4 chr13 65381850 65384905 -54899407 - L1_Mus1 LINE L1 0 6567 3483 6 1083 207 0 0 0 chr13 65384905 65384928 -54899384 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1083 21152 98 9 5 chr13 65384928 65385561 -54898751 - L1_Mus1 LINE L1 -2401 3482 2843 6 1083 282 256 24 71 chr13 65386458 65386542 -54897770 - ID4_ SINE ID 0 83 4 6 1083 422 308 54 0 chr13 65386619 65386749 -54897563 - ID_B1 SINE B4 0 224 88 6 1083 215 163 0 58 chr13 65386756 65386808 -54897504 + T-rich Low_complexity Low_complexity 2 50 0 6 1083 658 182 136 0 chr13 65387009 65387141 -54897171 + B1_Mur4 SINE Alu 1 150 0 6 1083 1816 191 35 30 chr13 65387338 65387706 -54896606 - ORR1D1 LTR MaLR -4 370 1 6 1083 434 148 158 0 chr13 65387707 65387808 -54896504 - ORR1D1-int LTR MaLR -1 1369 1253 6 1083 454 193 175 15 chr13 65387810 65387947 -54896365 + B3 SINE B2 1 159 -57 6 1083 789 130 117 11 chr13 65387948 65388127 -54896185 - ORR1D1-int LTR MaLR -113 1257 1060 6 1083 1104 155 134 38 chr13 65388120 65388382 -54895930 - ORR1D1 LTR MaLR -69 305 19 6 1083 428 195 0 49 chr13 65389410 65389491 -54894821 - ID4_ SINE ID -4 79 3 6 1083 545 217 35 9 chr13 65390228 65390344 -54893968 + PB1D9 SINE Alu 2 120 0 6 1083 341 203 40 0 chr13 65390406 65390480 -54893832 - B3 SINE B2 -2 214 138 6 1083 1210 96 271 0 chr13 65391690 65391867 -54892445 - URR1B DNA MER1_type 0 225 1 6 1083 302 191 202 53 chr13 65392137 65392231 -54892081 + PB1D10 SINE Alu 10 117 0 6 1083 710 268 91 0 chr13 65392232 65392430 -54891882 + ID_B1 SINE B4 1 216 -8 6 1083 642 262 102 25 chr13 65392756 65392952 -54891360 - ID_B1 SINE B4 -11 213 3 6 1083 403 300 42 21 chr13 65392964 65393107 -54891205 - B1F1 SINE Alu -3 146 1 6 1083 513 305 35 29 chr13 65394070 65394242 -54890070 + MLT1D LTR MaLR 263 435 -70 6 1083 336 336 61 8 chr13 65394247 65394379 -54889933 + B1F1 SINE Alu 3 141 -8 6 1083 481 322 83 57 chr13 65394476 65394706 -54889606 + B4A SINE B4 55 290 -2 6 1083 775 67 0 0 chr13 65394991 65395095 -54889217 - B1_Mus2 SINE Alu 0 147 44 6 1083 319 260 0 59 chr13 65395026 65395128 -54889184 - MT2B LTR ERVL -337 264 169 6 1083 254 227 68 68 chr13 65398428 65398546 -54885766 + MMSAT4 Satellite Satellite 37 154 -14 6 1083 31821 89 14 4 chr13 65399050 65402117 -54882195 - L1_Mus1 LINE L1 0 6567 3483 6 1083 234 0 0 0 chr13 65402117 65402143 -54882169 + (TTG)n Simple_repeat Simple_repeat 2 27 0 6 135 31821 141 42 39 chr13 65402143 65405332 -54878980 - L1_Mus1 LINE L1 -2401 3482 262 6 1084 1105 242 232 68 chr13 65405538 65405627 -54878685 + MT2A LTR ERVL 1 85 -448 6 1084 224 30 30 0 chr13 65405627 65405660 -54878652 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 6 1084 1228 63 0 0 chr13 65405660 65405803 -54878509 - B1_Mm SINE Alu -4 143 1 6 1084 1105 242 232 68 chr13 65405803 65406168 -54878144 + MT2A LTR ERVL 86 530 -3 6 1084 864 127 14 36 chr13 65406188 65406327 -54877985 - B1_Mus1 SINE Alu -1 147 12 6 1084 517 253 24 65 chr13 65406189 65406358 -54877954 - ID_B1 SINE B4 0 224 63 6 1084 486 0 0 0 chr13 65406581 65406635 -54877677 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 6 1084 664 255 48 7 chr13 65406660 65406806 -54877506 + RSINE1 SINE B4 4 155 -10 6 1084 584 280 89 6 chr13 65406829 65406998 -54877314 + B3A SINE B2 2 184 -14 6 1084 311 284 14 0 chr13 65407102 65407176 -54877136 + tRNA-Ala-GCG tRNA tRNA 1 75 0 6 1084 275 315 122 14 chr13 65407607 65407755 -54876557 - MLT1G3 LTR MaLR 0 595 432 6 1084 1767 201 96 16 chr13 65408492 65408877 -54875435 - MTD LTR MaLR -3 416 1 6 1084 1763 169 59 42 chr13 65408888 65409246 -54875066 + ORR1B1 LTR MaLR 1 364 -30 6 1084 591 225 38 15 chr13 65409552 65409683 -54874629 - B1_Mur2 SINE Alu -11 138 5 6 1084 685 241 14 28 chr13 65409715 65409860 -54874452 - B1_Mur2 SINE Alu -6 143 1 6 1084 1881 168 82 3 chr13 65409934 65410323 -54873989 - L1_Mur3 LINE L1 -2451 3429 3010 6 1084 184 30 61 0 chr13 65411199 65411232 -54873080 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1084 276 192 60 23 chr13 65411257 65411390 -54872922 + (TG)n Simple_repeat Simple_repeat 1 138 0 6 1084 233 264 71 81 chr13 65411569 65411779 -54872533 + RLTR25A LTR ERVK 895 1102 -1 6 1084 28 29 0 0 chr13 65411933 65411968 -54872344 + AT_rich Low_complexity Low_complexity 1 35 0 6 1084 546 224 28 149 chr13 65412250 65412465 -54871847 + B2_Mm2 SINE B2 7 195 0 6 1084 1569 180 22 16 chr13 65413536 65413886 -54870426 + ORR1A3-int LTR MaLR 982 1514 -449 6 1084 1475 122 30 4 chr13 65413890 65414121 -54870191 - RMER16-int LTR ERVK -3408 1998 1762 6 1084 1782 180 15 6 chr13 65414121 65414451 -54869861 + Lx2B LINE L1 6039 6371 -629 6 1084 1725 181 106 6 chr13 65414449 65414822 -54869490 + Lx2B LINE L1 6599 6997 -3 6 1084 21 0 0 0 chr13 65416345 65416366 -54867946 + AT_rich Low_complexity Low_complexity 1 21 0 6 1084 587 271 6 11 chr13 65416523 65416702 -54867610 - Lx7 LINE L1 -283 7413 7236 6 1084 1585 253 50 19 chr13 65416961 65417424 -54866888 - Lx7 LINE L1 -485 7211 6735 6 1084 21 0 0 0 chr13 65417618 65417639 -54866673 + AT_rich Low_complexity Low_complexity 1 21 0 6 1084 37137 51 5 1 chr13 65417985 65423126 -54861186 + L1Md_F3 LINE L1 1045 6206 -378 6 1084 3051 36 2 122 chr13 65423126 65423569 -54860743 - RLTR10 LTR ERVK 0 390 1 6 1084 8783 21 3 1 chr13 65423571 65424564 -54859748 - RLTR10-int LTR ERVK -3 1984 990 6 1084 349 273 39 15 chr13 65424646 65424776 -54859536 - RLTR10-int LTR ERVK -5987 1594 1462 6 1084 6881 40 71 47 chr13 65424840 65425784 -54858528 - RLTR10-int LTR ERVK -989 998 1 6 1084 3051 36 2 122 chr13 65425784 65426227 -54858085 - RLTR10 LTR ERVK 0 390 1 6 1084 3265 29 19 8 chr13 65426227 65426606 -54857706 + L1Md_F3 LINE L1 6201 6583 -1 6 1084 630 189 0 0 chr13 65426618 65426729 -54857583 - Lx7 LINE L1 -350 7346 7236 6 1084 1584 258 44 19 chr13 65426976 65427450 -54856862 - Lx7 LINE L1 -476 7220 6735 6 1084 3590 91 85 0 chr13 65428327 65428846 -54855466 + L1_Mus2 LINE L1 4289 4851 -1032 6 1084 7267 83 6 25 chr13 65428845 65429394 -54854918 + L1_Mus2 LINE L1 5458 6010 -556 6 1084 1053 103 20 7 chr13 65429394 65429540 -54854772 + B1_Mus1 SINE Alu 1 148 0 6 1084 7267 72 5 33 chr13 65429540 65430124 -54854188 + L1_Mus2 LINE L1 6011 6563 -3 6 1084 8136 216 36 51 chr13 65430144 65430254 -54854058 + L1_Mur3 LINE L1 1965 2057 -3823 7 1084 219 114 0 0 chr13 65430254 65430289 -54854023 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1084 8136 216 36 51 chr13 65430289 65431213 -54853099 + L1_Mur3 LINE L1 2058 2953 -2927 7 1084 1719 42 0 0 chr13 65431213 65431405 -54852907 + B2_Mm1t SINE B2 1 192 -1 7 1084 8136 216 36 51 chr13 65431405 65432261 -54852051 + L1_Mur3 LINE L1 2954 3820 -2060 7 1084 2631 53 276 11 chr13 65432261 65432642 -54851670 + RLTR45 LTR ERVK 1 482 0 7 1084 8136 216 36 51 chr13 65432642 65433133 -54851179 + L1_Mur3 LINE L1 3821 4312 -1568 7 1084 290 325 32 13 chr13 65433474 65433630 -54850682 - MurSatRep1 Unknown Unknown -88 2049 1891 7 1084 23 0 0 0 chr13 65434152 65434175 -54850137 + AT_rich Low_complexity Low_complexity 1 23 0 7 1084 1750 184 0 72 chr13 65434430 65434776 -54849536 - ORR1A4 LTR MaLR -8 321 1 7 1084 5584 205 123 130 chr13 65434776 65435038 -54849274 - ORR1A4-int LTR MaLR 0 1963 1761 7 1084 1124 116 7 0 chr13 65435038 65435185 -54849127 - B1_Mus1 SINE Alu 0 148 1 7 1084 5584 205 123 130 chr13 65435185 65436527 -54847785 - ORR1A4-int LTR MaLR -203 1760 464 7 1084 1309 56 0 11 chr13 65436527 65436708 -54847604 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 7 1084 1136 92 0 0 chr13 65436710 65436851 -54847461 - B1_Mm SINE Alu -5 142 2 7 1084 5584 205 123 130 chr13 65436851 65437217 -54847095 - ORR1A4-int LTR MaLR -1500 463 1 7 1084 1587 216 7 34 chr13 65437218 65437590 -54846722 - ORR1A4 LTR MaLR -1 393 1 7 1084 265 299 7 62 chr13 65437647 65437757 -54846555 - MMSAT4 Satellite Satellite 0 168 59 7 1084 2571 152 15 15 chr13 65437757 65438165 -54846147 - RLTR9E LTR ERVK 0 409 2 7 1084 265 299 7 62 chr13 65438165 65438200 -54846112 - MMSAT4 Satellite Satellite -110 58 31 7 1084 231 324 41 66 chr13 65438200 65438369 -54845943 - MurSatRep1 Unknown Unknown -197 1940 1738 7 1084 237 310 44 33 chr13 65438314 65438537 -54845775 - MMSAT4 Satellite Satellite 0 225 1 7 1084 346 276 28 16 chr13 65438732 65438950 -54845362 - MMSAT4 Satellite Satellite 0 220 1 7 1084 399 305 0 0 chr13 65439173 65439301 -54845011 - MMSAT4 Satellite Satellite -22 146 19 7 1084 596 313 61 42 chr13 65439233 65440205 -54844107 - MurSatRep1 Unknown Unknown 0 2137 1746 7 1084 550 232 24 24 chr13 65440159 65440395 -54843917 - MMSAT4 Satellite Satellite 0 236 1 7 1084 8534 266 74 44 chr13 65440325 65440937 -54843375 - MurSatRep1 Unknown Unknown 0 2137 1759 7 1084 207 0 0 0 chr13 65440937 65440960 -54843352 + (TA)n Simple_repeat Simple_repeat 1 23 0 7 1084 8534 195 81 32 chr13 65440960 65442096 -54842216 - MurSatRep1 Unknown Unknown -193 1944 769 7 1084 1363 20 0 0 chr13 65442096 65442244 -54842068 + B1_Mus1 SINE Alu 1 148 0 7 1084 8534 195 81 32 chr13 65442244 65442952 -54841360 - MurSatRep1 Unknown Unknown -1369 768 1 7 1084 307 376 24 19 chr13 65443048 65443257 -54841055 + B3 SINE B2 2 211 -5 7 1084 223 191 21 0 chr13 65443483 65443530 -54840782 + B1_Mus2 SINE Alu 100 147 0 7 1084 26 0 0 0 chr13 65443533 65443559 -54840753 + AT_rich Low_complexity Low_complexity 1 26 0 7 1084 787 194 0 0 chr13 65443667 65443827 -54840485 - MurSatRep1 Unknown Unknown -1977 160 1 7 1084 434 191 16 50 chr13 65443875 65443996 -54840316 + Lx4B LINE L1 6336 6452 -606 7 1084 5704 206 28 32 chr13 65443996 65445379 -54838933 + Lx4B LINE L1 5677 7052 -6 7 1084 480 374 44 24 chr13 65445426 65445754 -54838558 - MTD-int LTR MaLR -1219 361 2 7 1084 615 357 67 44 chr13 65445780 65446123 -54838189 - MTD LTR MaLR -16 403 53 7 1084 1046 92 7 0 chr13 65448389 65448530 -54835782 + B1_Mus2 SINE Alu 4 145 -2 7 1084 180 0 0 0 chr13 65448530 65448550 -54835762 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 7 1084 366 249 100 6 chr13 65448562 65448732 -54835580 + L1_Mur3 LINE L1 906 1091 -6637 7 1084 1321 235 63 58 chr13 65449057 65449577 -54834735 + L1_Mur3 LINE L1 1314 1836 -4044 7 1084 305 274 0 35 chr13 65450339 65450426 -54833886 - MT2A LTR ERVL -376 157 74 7 1084 237 167 0 69 chr13 65450465 65450523 -54833789 + (TTAGGG)n Simple_repeat Simple_repeat 5 58 0 7 1084 223 306 61 10 chr13 65450701 65450800 -54833512 + B1_Mus1 SINE Alu 9 112 -36 7 1084 28 29 0 0 chr13 65451290 65451325 -54832987 + AT_rich Low_complexity Low_complexity 1 35 0 7 1084 1528 161 168 35 chr13 65451805 65452179 -54832133 - RLTR33 LTR ERVK -254 424 1 7 1084 318 237 107 58 chr13 65452459 65452580 -54831732 - B1_Mur1 SINE Alu -1 148 22 7 1084 207 0 0 0 chr13 65452622 65452645 -54831667 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1084 21 71 0 0 chr13 65452710 65452752 -54831560 + AT_rich Low_complexity Low_complexity 1 42 0 7 1084 333 239 43 0 chr13 65452755 65452872 -54831440 + (TG)n Simple_repeat Simple_repeat 1 122 0 7 1084 276 137 0 0 chr13 65452953 65453004 -54831308 + (TATG)n Simple_repeat Simple_repeat 4 54 0 7 1084 597 313 65 20 chr13 65454048 65454446 -54829866 + Lx9 LINE L1 7202 7617 -27 7 1084 26 64 0 0 chr13 65455638 65455685 -54828627 + AT_rich Low_complexity Low_complexity 1 47 0 7 1084 831 166 0 12 chr13 65457175 65457340 -54826972 - Lx2 LINE L1 -67 6930 6768 7 1084 355 97 0 0 chr13 65457346 65457408 -54826904 + Lx2 LINE L1 6935 6996 -1 7 1084 30 0 0 0 chr13 65457535 65457565 -54826747 + AT_rich Low_complexity Low_complexity 1 30 0 7 1084 231 36 0 0 chr13 65458336 65458364 -54825948 + (TTG)n Simple_repeat Simple_repeat 2 29 0 7 1084 1297 87 40 0 chr13 65458367 65458540 -54825772 - B2_Mm2 SINE B2 -15 180 1 7 1084 27737 74 5 1 chr13 65458564 65462500 -54821812 + L1Md_F2 LINE L1 1635 5586 -297 7 1084 7401 76 4 14 chr13 65462501 65463506 -54820806 + L1Md_F2 LINE L1 5588 6582 0 7 1084 1157 61 7 0 chr13 65463751 65463898 -54820414 - B1_Mus1 SINE Alu 0 148 1 7 1084 30 45 0 0 chr13 65465260 65465304 -54819008 + AT_rich Low_complexity Low_complexity 1 44 0 7 1084 225 171 0 0 chr13 65465305 65465346 -54818966 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1084 23 0 0 0 chr13 65466098 65466121 -54818191 + AT_rich Low_complexity Low_complexity 1 23 0 7 1084 1153 55 7 7 chr13 65466967 65467114 -54817198 + B1_Mus2 SINE Alu 1 147 0 7 1084 186 71 0 0 chr13 65467146 65467174 -54817138 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 7 1084 221 164 36 18 chr13 65469086 65469142 -54815170 + A-rich Low_complexity Low_complexity 2 58 0 7 1084 212 200 0 16 chr13 65469457 65469518 -54814794 + CT-rich Low_complexity Low_complexity 2 61 0 7 1084 540 0 0 0 chr13 65470556 65470616 -54813696 + (TC)n Simple_repeat Simple_repeat 1 60 0 7 1084 1039 133 0 0 chr13 65470620 65470763 -54813549 - B1_Mus2 SINE Alu -4 143 1 7 1084 777 177 20 14 chr13 65470846 65471042 -54813270 - L1_Mur3 LINE L1 -1864 4276 4062 7 1084 204 40 0 0 chr13 65471044 65471069 -54813243 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 1084 12353 160 33 19 chr13 65471419 65472233 -54812079 + L1_Mur2 LINE L1 677 1514 -4363 7 1084 1833 133 112 0 chr13 65472233 65472527 -54811785 + ORR1A2 LTR MaLR 1 327 0 7 1084 12353 166 24 77 chr13 65472527 65473278 -54811034 + L1_Mur2 LINE L1 1515 2223 -3654 7 1084 1618 47 0 0 chr13 65473278 65473471 -54810841 + B2_Mm1t SINE B2 1 193 0 7 1084 12353 166 24 77 chr13 65473471 65475271 -54809041 + L1_Mur2 LINE L1 2224 3929 -1948 7 1084 1336 92 11 0 chr13 65475271 65475455 -54808857 + B2_Mm2 SINE B2 1 186 -9 7 1084 12353 166 24 77 chr13 65475455 65475688 -54808624 + L1_Mur2 LINE L1 3930 4133 -1744 7 1084 2018 76 23 0 chr13 65475682 65475985 -54808327 - MusHAL1 LINE L1 -733 1979 1670 7 1084 303 260 96 30 chr13 65475985 65476120 -54808192 + B1_Mm SINE Alu 4 147 0 7 1084 839 118 0 48 chr13 65476128 65476315 -54807997 + GA-rich Low_complexity Low_complexity 3 180 0 7 1084 180 111 0 0 chr13 65476372 65476399 -54807913 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 7 1084 414 0 0 0 chr13 65476528 65476574 -54807738 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1084 477 0 0 0 chr13 65476613 65476666 -54807646 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1084 2772 154 101 50 chr13 65476708 65477274 -54807038 - RLTR33 LTR ERVK -83 595 1 7 1084 202 97 0 31 chr13 65477530 65477562 -54806750 + (CATG)n Simple_repeat Simple_repeat 2 32 0 7 1084 280 307 122 48 chr13 65477570 65477717 -54806595 - B4A SINE B4 -41 251 94 7 1084 311 294 122 38 chr13 65477591 65477722 -54806590 - B1_Mus1 SINE Alu -1 147 6 7 1084 195 69 0 0 chr13 65477747 65477776 -54806536 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1084 267 79 0 0 chr13 65477799 65477837 -54806475 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1084 180 250 78 0 chr13 65478433 65478497 -54805815 - L3 LINE CR1 -886 3603 3535 7 1084 288 0 0 0 chr13 65479999 65480031 -54804281 + (TG)n Simple_repeat Simple_repeat 1 32 0 7 1084 272 193 57 25 chr13 65480069 65480191 -54804121 + (TG)n Simple_repeat Simple_repeat 1 126 0 7 1084 348 24 0 0 chr13 65480246 65480287 -54804025 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1084 520 239 23 148 chr13 65481047 65481263 -54803049 + B2_Mm2 SINE B2 7 195 0 7 1084 1485 184 15 50 chr13 65482351 65482689 -54801623 + ORR1A3-int LTR MaLR 1189 1514 -449 7 1084 1375 124 13 4 chr13 65482698 65482924 -54801388 - RMER16-int LTR ERVK -3417 1989 1762 7 1084 1594 184 18 6 chr13 65482924 65483252 -54801060 + Lx2B LINE L1 6039 6370 -630 7 1084 1956 141 78 11 chr13 65483262 65483634 -54800678 + Lx2B LINE L1 6599 6995 -5 7 1084 21 0 0 0 chr13 65484495 65484516 -54799796 + AT_rich Low_complexity Low_complexity 1 21 0 7 1084 227 104 0 59 chr13 65484675 65484726 -54799586 + A-rich Low_complexity Low_complexity 2 49 0 7 1084 570 211 0 0 chr13 65484729 65484852 -54799460 - Lx7 LINE L1 -338 7358 7236 7 1084 1486 242 25 23 chr13 65485132 65485563 -54798749 - Lx7 LINE L1 -520 7176 6745 7 1084 21 0 0 0 chr13 65485767 65485788 -54798524 + AT_rich Low_complexity Low_complexity 1 21 0 7 1084 310 194 114 3 chr13 65486360 65486468 -54797844 - MTD LTR MaLR 0 421 298 7 1084 9849 102 16 12 chr13 65486474 65488076 -54796236 + L1_Mus2 LINE L1 4304 5923 -643 7 1084 3454 20 5 0 chr13 65488076 65488470 -54795842 - MTA_Mm LTR MaLR 0 396 1 7 1084 9099 37 5 1 chr13 65488470 65489564 -54794748 - MTA_Mm-int LTR MaLR 0 1098 1 7 1084 3454 20 5 0 chr13 65489564 65489958 -54794354 - MTA_Mm LTR MaLR 0 396 1 7 1084 6428 68 22 45 chr13 65489958 65490050 -54794262 + L1_Mus2 LINE L1 5924 6004 -562 7 1084 892 140 0 7 chr13 65490050 65490194 -54794118 + B1_Mus1 SINE Alu 1 143 -5 7 1084 6428 68 22 45 chr13 65490194 65490775 -54793537 + L1_Mus2 LINE L1 6005 6564 -2 7 1084 7114 222 38 46 chr13 65490798 65490911 -54793401 + L1_Mur3 LINE L1 1965 2058 -3822 7 1084 180 0 0 0 chr13 65490911 65490931 -54793381 + (CA)n Simple_repeat Simple_repeat 1 20 0 7 1084 7114 222 38 46 chr13 65490931 65493183 -54791129 + L1_Mur3 LINE L1 2059 4312 -1568 7 1084 4516 224 99 139 chr13 65494443 65496635 -54787677 - ORR1B1-int LTR MaLR 0 1792 15 7 1084 1039 125 0 0 chr13 65496635 65496779 -54787533 - B1_Mus2 SINE Alu -1 146 3 7 1084 4516 202 130 152 chr13 65496779 65497148 -54787164 - ORR1B1-int LTR MaLR -1512 451 1 7 1084 1570 234 6 38 chr13 65497148 65497513 -54786799 - ORR1B1 LTR MaLR 0 394 42 7 1084 2339 145 22 25 chr13 65497689 65498093 -54786219 - RLTR9E LTR ERVK 0 409 7 7 1084 233 297 27 9 chr13 65498762 65498874 -54785438 - MMSAT4 Satellite Satellite -12 156 43 7 1084 512 309 53 38 chr13 65499000 65499842 -54784470 - MurSatRep1 Unknown Unknown 0 2137 1755 7 1084 483 273 0 0 chr13 65499842 65499981 -54784331 - MMSAT4 Satellite Satellite 0 168 30 7 1084 512 309 53 38 chr13 65499981 65499998 -54784314 - MurSatRep1 Unknown Unknown 0 1754 1747 7 1084 389 335 24 24 chr13 65500005 65500296 -54784016 - MurSatRep1 Unknown Unknown -88 2049 1759 1 1084 456 259 18 25 chr13 65500010 65500312 -54784000 - MMSAT4 Satellite Satellite 0 299 1 2 1084 6951 197 130 19 chr13 65500348 65501122 -54783190 - MurSatRep1 Unknown Unknown -3 2134 1345 3 1084 402 21 0 0 chr13 65501122 65501169 -54783143 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1084 6951 197 130 19 chr13 65501169 65502161 -54782151 - MurSatRep1 Unknown Unknown -793 1344 168 3 1084 273 311 76 0 chr13 65502161 65502280 -54782032 + B1_Mur2 SINE Alu 5 132 -17 5 1084 6951 197 130 19 chr13 65502280 65502433 -54781879 - MurSatRep1 Unknown Unknown -1970 167 2 3 1084 429 364 30 20 chr13 65502529 65502728 -54781584 + B3 SINE B2 2 202 -14 6 1084 226 191 21 0 chr13 65502970 65503017 -54781295 + B1_Mus2 SINE Alu 100 147 0 7 1084 34933 69 13 18 chr13 65503093 65508754 -54775558 + Lx4B LINE L1 99 5586 -297 8 1084 8014 57 0 0 chr13 65508754 65509750 -54774562 + L1Md_T LINE L1 5587 6582 0 9 1084 34933 170 22 16 chr13 65509750 65511275 -54773037 + Lx4B LINE L1 5587 7052 -6 8 1084 503 371 29 19 chr13 65511322 65511653 -54772659 - MTD-int LTR MaLR -1219 361 2 1 1084 683 327 79 50 chr13 65511679 65512020 -54772292 - MTD LTR MaLR -16 403 53 1 1084 1030 91 28 0 chr13 65514340 65514483 -54769829 + B1_Mus2 SINE Alu 1 147 0 1 1084 410 262 81 6 chr13 65514509 65514682 -54769630 + L1_Mur3 LINE L1 906 1091 -6637 1 1084 1118 243 54 87 chr13 65515011 65515276 -54769036 + L1_Mur3 LINE L1 1314 1595 -4285 1 1084 1439 69 5 0 chr13 65515276 65515465 -54768847 + B2_Mm1t SINE B2 2 191 -2 1 1084 1118 243 54 87 chr13 65515465 65515740 -54768572 + L1_Mur3 LINE L1 1596 1836 -4044 1 1084 290 271 40 16 chr13 65516483 65516582 -54767730 - MT2A LTR ERVL -376 157 74 1 1084 234 250 0 19 chr13 65516563 65516616 -54767696 - MT2A LTR ERVL -410 123 72 1 1084 237 167 0 69 chr13 65516621 65516679 -54767633 + (TTAGGG)n Simple_repeat Simple_repeat 5 58 0 1 1084 30 77 0 0 chr13 65517172 65517237 -54767075 + AT_rich Low_complexity Low_complexity 1 65 0 1 1084 223 306 61 10 chr13 65518692 65518791 -54765521 + B1_Mus1 SINE Alu 9 112 -36 1 1084 26 30 0 0 chr13 65519280 65519313 -54764999 + AT_rich Low_complexity Low_complexity 1 33 0 1 1084 1490 163 168 37 chr13 65519795 65520170 -54764142 - RLTR33 LTR ERVK -254 424 1 1 1084 318 237 107 58 chr13 65520450 65520571 -54763741 - B1_Mur1 SINE Alu -1 148 22 2 1084 540 45 0 0 chr13 65520613 65520680 -54763632 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1084 21 71 0 0 chr13 65520745 65520787 -54763525 + AT_rich Low_complexity Low_complexity 1 42 0 2 1084 308 248 43 0 chr13 65520790 65520907 -54763405 + (TG)n Simple_repeat Simple_repeat 1 122 0 2 1084 276 137 0 0 chr13 65520988 65521039 -54763273 + (TATG)n Simple_repeat Simple_repeat 4 54 0 2 1084 614 310 65 20 chr13 65522080 65522478 -54761834 + Lx9 LINE L1 7202 7617 -27 2 1084 26 64 0 0 chr13 65523670 65523717 -54760595 + AT_rich Low_complexity Low_complexity 1 47 0 2 1084 21 95 0 0 chr13 65524936 65524999 -54759313 + AT_rich Low_complexity Low_complexity 1 63 0 2 1084 818 172 0 12 chr13 65525206 65525371 -54758941 - Lx2 LINE L1 -67 6930 6768 2 1084 337 113 0 0 chr13 65525377 65525439 -54758873 + Lx2 LINE L1 6935 6996 -1 2 1084 37 23 0 0 chr13 65525566 65525610 -54758702 + AT_rich Low_complexity Low_complexity 1 44 0 2 1084 231 36 0 0 chr13 65526367 65526395 -54757917 + (TTG)n Simple_repeat Simple_repeat 2 29 0 3 1084 1297 87 40 0 chr13 65526398 65526571 -54757741 - B2_Mm2 SINE B2 -15 180 1 3 1084 27692 75 5 1 chr13 65526595 65530529 -54753783 + L1Md_F2 LINE L1 1635 5586 -297 3 1084 7441 74 4 17 chr13 65530530 65531538 -54752774 + L1Md_F2 LINE L1 5588 6582 0 3 1084 1157 61 7 0 chr13 65531777 65531924 -54752388 - B1_Mus1 SINE Alu 0 148 1 3 1084 30 45 0 0 chr13 65533285 65533329 -54750983 + AT_rich Low_complexity Low_complexity 1 44 0 3 1084 225 171 0 0 chr13 65533330 65533371 -54750941 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1084 23 0 0 0 chr13 65534123 65534146 -54750166 + AT_rich Low_complexity Low_complexity 1 23 0 3 1084 1140 55 14 7 chr13 65534992 65535138 -54749174 + B1_Mus2 SINE Alu 1 147 0 3 1084 245 100 20 0 chr13 65535147 65535197 -54749115 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 3 1085 182 146 0 40 chr13 65537110 65537160 -54747152 + A-rich Low_complexity Low_complexity 2 49 0 3 1085 224 200 0 16 chr13 65537480 65537541 -54746771 + CT-rich Low_complexity Low_complexity 2 61 0 4 1085 441 0 0 0 chr13 65538579 65538628 -54745684 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1085 13340 162 24 18 chr13 65538628 65539143 -54745169 + L1_Mur2 LINE L1 992 1517 -4360 4 1085 1873 122 112 0 chr13 65539143 65539437 -54744875 + ORR1A2 LTR MaLR 1 327 0 4 1085 13340 157 32 30 chr13 65539437 65540786 -54743526 + L1_Mur2 LINE L1 1518 2870 -3007 4 1085 1047 147 0 0 chr13 65540786 65540963 -54743349 + (GGGA)n Simple_repeat Simple_repeat 3 179 0 4 1085 13340 157 32 30 chr13 65540963 65541997 -54742315 + L1_Mur2 LINE L1 2871 3929 -1948 4 1085 1304 77 11 11 chr13 65541997 65542181 -54742131 + B2_Mm1t SINE B2 1 184 -9 4 1085 13340 157 32 30 chr13 65542181 65542414 -54741898 + L1_Mur2 LINE L1 3930 4133 -1744 4 1085 2042 73 23 0 chr13 65542408 65542711 -54741601 - MusHAL1 LINE L1 -733 1979 1670 4 1085 316 260 96 30 chr13 65542711 65542846 -54741466 + B1_Mm SINE Alu 4 147 0 4 1085 467 170 0 10 chr13 65542854 65542955 -54741357 + GA-rich Low_complexity Low_complexity 3 102 0 4 1085 984 126 0 17 chr13 65542958 65543135 -54741177 + (GAAA)n Simple_repeat Simple_repeat 3 176 0 4 1085 4584 71 6 34 chr13 65543206 65543544 -54740768 - L1_Mus2 LINE L1 -239 6327 6011 5 1085 1030 79 7 7 chr13 65543544 65543685 -54740627 - B1_Mus1 SINE Alu -7 141 1 5 1085 4584 71 6 34 chr13 65543685 65544033 -54740279 - L1_Mus2 LINE L1 -556 6010 5660 5 1085 6277 61 28 18 chr13 65544033 65544879 -54739433 + RLTR13A LTR ERVK 1 855 0 5 1085 42561 25 5 2 chr13 65544881 65550175 -54734137 + ETnERV3-int LTR ERVK 3 5313 -495 5 1085 2797 23 0 25 chr13 65550179 65550538 -54733774 + ETnERV3-int LTR ERVK 5449 5798 -10 5 1085 6277 61 28 18 chr13 65550546 65551392 -54732920 + RLTR13A LTR ERVK 1 855 0 5 1085 1047 107 0 0 chr13 65551393 65551543 -54732769 - L1_Mus2 LINE L1 -219 5664 5515 5 1085 495 112 43 8 chr13 65551694 65551811 -54732501 + (TG)n Simple_repeat Simple_repeat 1 121 0 5 1085 207 218 67 15 chr13 65551836 65551971 -54732341 + (TG)n Simple_repeat Simple_repeat 1 142 0 5 1085 527 245 23 144 chr13 65552736 65552951 -54731361 + B2_Mm2 SINE B2 7 195 0 5 1085 244 254 0 0 chr13 65553118 65553173 -54731139 + RLTR22_Mur LTR ERVK 2 56 -1792 5 1085 1485 184 15 50 chr13 65554035 65554373 -54729939 + ORR1A3-int LTR MaLR 1189 1514 -449 5 1085 1391 120 13 4 chr13 65554382 65554608 -54729704 - RMER16-int LTR ERVK -3417 1989 1762 5 1085 1744 170 15 6 chr13 65554608 65554939 -54729373 + Lx2B LINE L1 6039 6372 -628 5 1085 1906 146 83 11 chr13 65554947 65555320 -54728992 + Lx2B LINE L1 6599 6998 -2 5 1085 183 129 0 0 chr13 65556159 65556190 -54728122 + (TTA)n Simple_repeat Simple_repeat 1 31 0 5 1085 618 266 6 11 chr13 65556358 65556537 -54727775 - Lx7 LINE L1 -283 7413 7236 6 1085 1548 255 23 20 chr13 65556818 65557259 -54727053 - Lx7 LINE L1 -520 7176 6735 6 1085 260 267 46 20 chr13 65557295 65557448 -54726864 + Lx9 LINE L1 7486 7642 -2 6 1085 3919 93 3 14 chr13 65558144 65558713 -54725599 + L1_Mus2 LINE L1 4289 4851 -1032 6 1085 3334 66 9 2 chr13 65558712 65559262 -54725050 + L1_Mus2 LINE L1 5458 6010 -556 6 1085 1076 83 28 7 chr13 65559262 65559407 -54724905 + B1_Mus1 SINE Alu 1 148 0 6 1085 1292 62 0 0 chr13 65559418 65559578 -54724734 + B2_Mm1t SINE B2 1 160 -33 6 1085 486 0 0 0 chr13 65559578 65559632 -54724680 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 6 1085 4342 77 2 41 chr13 65559639 65560222 -54724090 + L1_Mus2 LINE L1 6004 6563 -3 6 1085 1337 217 33 92 chr13 65560242 65560352 -54723960 + L1_Mur3 LINE L1 1965 2057 -3823 6 1085 279 0 0 0 chr13 65560352 65560383 -54723929 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1085 1337 217 33 92 chr13 65560383 65560729 -54723583 + L1_Mur3 LINE L1 2058 2394 -3486 6 1085 422 388 21 26 chr13 65560739 65560972 -54723340 + B4A SINE B4 60 291 -1 6 1085 536 97 0 11 chr13 65561006 65561100 -54723212 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 1085 295 259 0 0 chr13 65561112 65561166 -54723146 + B4 SINE B4 229 282 -10 7 1085 355 333 97 48 chr13 65561326 65561635 -54722677 - ORR1E LTR MaLR -17 342 19 7 1085 197 65 0 31 chr13 65562677 65562709 -54721603 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 7 1085 634 206 79 8 chr13 65562709 65562836 -54721476 - B1_Mur2 SINE Alu -13 136 1 7 1085 324 194 28 0 chr13 65562875 65562947 -54721365 - Lx2 LINE L1 -15 6982 6909 7 1085 1365 105 11 0 chr13 65562953 65563143 -54721169 - B2_Mm1t SINE B2 0 193 2 7 1085 3719 18 2 0 chr13 65563227 65563622 -54720690 - MTA_Mm LTR MaLR 0 396 1 7 1085 1156 201 13 13 chr13 65563718 65563950 -54720362 + MTC LTR MaLR 182 413 -8 7 1085 813 155 27 47 chr13 65563969 65564118 -54720194 - B1_Mur3 SINE Alu 0 149 4 7 1085 383 296 130 0 chr13 65564148 65564263 -54720049 - RSINE1 SINE B4 -33 132 3 7 1085 615 198 0 0 chr13 65564354 65564450 -54719862 + PB1D9 SINE Alu 6 101 -19 8 1085 836 278 49 0 chr13 65564521 65564726 -54719586 + B3 SINE B2 2 216 0 8 1085 216 130 0 0 chr13 65564797 65564843 -54719469 + (TTTG)n Simple_repeat Simple_repeat 1 46 0 8 1085 887 159 29 7 chr13 65564847 65564986 -54719326 - B1_Mur4 SINE Alu -6 144 3 8 1085 308 344 80 75 chr13 65565114 65565384 -54718928 - MLT1G1 LTR MaLR -220 375 84 8 1085 1184 212 65 90 chr13 65565890 65566366 -54717946 - MT2B LTR ERVL 0 601 6 8 1085 233 175 0 0 chr13 65566363 65566403 -54717909 + ID_B1 SINE B4 184 223 -1 8 1085 567 288 0 8 chr13 65566427 65566546 -54717766 + RSINE1 SINE B4 18 135 -30 8 1085 806 237 19 72 chr13 65566739 65566948 -54717364 + B3A SINE B2 1 198 0 8 1085 456 240 207 0 chr13 65566969 65567090 -54717222 + B1_Mur2 SINE Alu 3 148 -1 8 1085 278 277 35 24 chr13 65567095 65567180 -54717132 + polypurine Low_complexity Low_complexity 3 88 0 9 1085 2469 176 77 6 chr13 65567221 65567702 -54716610 + RLTR11A2 LTR ERVK 1 515 -12 9 1085 1074 176 131 0 chr13 65567884 65568083 -54716229 - URR1A DNA MER1_type -1 225 1 9 1085 361 156 0 15 chr13 65568083 65568148 -54716164 + RLTR18B LTR ERVK 38 101 -411 9 1085 2893 216 53 96 chr13 65568152 65568287 -54716025 - RLTR18-int LTR ERVK -850 4511 4373 9 1085 746 181 265 0 chr13 65568287 65568453 -54715859 + B3 SINE B2 2 211 -5 9 1085 2893 216 53 96 chr13 65568453 65569356 -54714956 - RLTR18-int LTR ERVK -989 4372 3518 9 1085 875 156 21 0 chr13 65569356 65569497 -54714815 + B1_Mur4 SINE Alu 1 144 -6 9 1085 1247 71 0 17 chr13 65569513 65569685 -54714627 + B2_Mm2 SINE B2 2 170 -25 9 1085 3006 201 30 25 chr13 65569701 65570343 -54713969 - RLTR18-int LTR ERVK -1811 3550 2906 9 1085 2143 72 0 0 chr13 65570345 65570621 -54713691 + RLTR10A LTR ERVK 1 276 -135 9 1085 1778 156 7 0 chr13 65570622 65570898 -54713414 + RLTR27 LTR ERVK 32 309 0 9 1085 720 61 10 0 chr13 65570916 65571014 -54713298 - MTB LTR MaLR -4 322 224 1 1085 1001 99 6 38 chr13 65571419 65571455 -54712857 - MTB LTR MaLR -247 153 122 1 1085 2437 129 16 52 chr13 65571455 65571879 -54712433 + RLTR9E LTR ERVK 1 409 0 1 1085 1001 99 6 38 chr13 65571879 65572000 -54712312 - MTB LTR MaLR -279 121 1 1 1085 387 245 66 38 chr13 65572101 65572207 -54712105 - PB1D10 SINE Alu -5 112 4 1 1085 945 165 4 12 chr13 65572257 65572502 -54711810 + CT-rich Low_complexity Low_complexity 1 243 0 1 1085 4357 104 39 3 chr13 65572591 65573201 -54711111 + L1_Mus4 LINE L1 6005 6636 0 1 1085 31 26 0 0 chr13 65573276 65573314 -54710998 + AT_rich Low_complexity Low_complexity 1 38 0 1 1085 247 282 89 59 chr13 65573475 65573675 -54710637 - RLTR25B LTR ERVK -9 1094 855 1 1085 309 220 51 40 chr13 65573745 65573920 -54710392 + (CA)n Simple_repeat Simple_repeat 1 177 0 1 1085 4404 116 3 2 chr13 65575309 65575895 -54708417 - LTRIS_Mus LTR ERV1 0 587 1 1 1085 623 272 32 35 chr13 65576631 65576855 -54707457 - LTRIS5 LTR ERV1 -7 512 237 1 1085 261 109 15 30 chr13 65577447 65577513 -54706799 + G-rich Low_complexity Low_complexity 1 65 0 1 1085 28 0 0 0 chr13 65577923 65577951 -54706361 + AT_rich Low_complexity Low_complexity 1 28 0 1 1085 351 238 54 90 chr13 65578048 65578159 -54706153 - B4 SINE B4 -103 189 83 1 1085 204 40 0 0 chr13 65578381 65578406 -54705906 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1085 675 0 0 0 chr13 65578417 65578492 -54705820 + (TTTA)n Simple_repeat Simple_repeat 3 77 0 1 1085 1247 22 0 0 chr13 65578492 65578627 -54705685 - B1_Mus2 SINE Alu -11 136 2 1 1085 233 295 32 24 chr13 65579423 65579548 -54704764 - MMSAT4 Satellite Satellite 0 168 43 1 1085 316 287 24 24 chr13 65579586 65579711 -54704601 - MMSAT4 Satellite Satellite 0 168 44 1 1085 21 36 0 0 chr13 65579715 65579743 -54704569 + AT_rich Low_complexity Low_complexity 1 28 0 1 1085 426 311 45 40 chr13 65579764 65579962 -54704350 - MurSatRep1 Unknown Unknown -88 2049 1851 1 1085 308 305 22 30 chr13 65579852 65579987 -54704325 - MMSAT4 Satellite Satellite 0 168 35 1 1085 378 269 23 23 chr13 65580023 65580234 -54704078 - MMSAT4 Satellite Satellite -5 211 1 1 1085 9633 191 27 60 chr13 65580269 65580476 -54703836 - MurSatRep1 Unknown Unknown -1 2136 1924 1 1085 1182 95 0 0 chr13 65580476 65580624 -54703688 - B1_Mus1 SINE Alu 0 148 1 1 1085 9633 191 27 60 chr13 65580624 65581543 -54702769 - MurSatRep1 Unknown Unknown -214 1923 1090 1 1085 831 88 0 272 chr13 65581543 65581745 -54702567 - B1_Mus1 SINE Alu 0 148 2 1 1085 9633 191 27 60 chr13 65581745 65582826 -54701486 - MurSatRep1 Unknown Unknown -1048 1089 1 1 1085 225 224 19 0 chr13 65583330 65583396 -54700916 + B1_Mus2 SINE Alu 83 149 0 1 1085 21 0 0 0 chr13 65583398 65583419 -54700893 + AT_rich Low_complexity Low_complexity 1 21 0 1 1085 238 35 0 0 chr13 65583576 65583605 -54700707 + Lx4B LINE L1 6353 6381 -677 1 1085 1182 164 9 9 chr13 65583626 65583836 -54700476 + Lx4B LINE L1 6690 6899 -159 1 1085 237 316 121 28 chr13 65584164 65584379 -54699933 + L1_Mur3 LINE L1 48 282 -7446 1 1085 510 256 40 18 chr13 65584412 65584639 -54699673 + L1_Mur3 LINE L1 860 1091 -6637 1 1085 1363 238 59 37 chr13 65584958 65585469 -54698843 + L1_Mur3 LINE L1 1314 1835 -4045 1 1085 357 333 25 78 chr13 65586561 65586805 -54697507 - MT2A LTR ERVL -228 305 75 1 1085 242 102 61 0 chr13 65586889 65586938 -54697374 + (TTAGGG)n Simple_repeat Simple_repeat 1 52 0 1 1085 801 128 17 0 chr13 65588386 65588503 -54695809 - PB1D9 SINE Alu 0 120 2 1 1085 999 191 11 8 chr13 65588945 65589394 -54694918 + MMSAT4 Satellite Satellite 1 450 0 1 1085 25 0 0 0 chr13 65589867 65589892 -54694420 + AT_rich Low_complexity Low_complexity 1 25 0 1 1085 1196 68 0 7 chr13 65589892 65590039 -54694273 - B1_Mm SINE Alu 0 147 2 1 1085 457 348 33 14 chr13 65590062 65590275 -54694037 + RMER15 LTR ERVL 258 474 -101 1 1085 4592 94 24 5 chr13 65591096 65591716 -54692596 - L1_Mus4 LINE L1 0 6636 6005 1 1085 261 290 0 36 chr13 65591796 65591894 -54692418 + GA-rich Low_complexity Low_complexity 2 97 0 1 1085 1137 82 0 7 chr13 65591894 65592042 -54692270 + B1_Mus2 SINE Alu 1 147 0 1 1085 261 290 0 36 chr13 65592042 65592054 -54692258 + polypurine Low_complexity Low_complexity 98 108 0 1 1085 772 139 0 14 chr13 65592054 65592200 -54692112 + GA-rich Low_complexity Low_complexity 2 145 0 1 1085 387 245 66 38 chr13 65592246 65592352 -54691960 + PB1D10 SINE Alu 4 112 -5 1 1085 378 42 0 0 chr13 65592409 65592457 -54691855 + (TA)n Simple_repeat Simple_repeat 1 48 0 1 1085 993 105 6 38 chr13 65592489 65592610 -54691702 + MTB LTR MaLR 1 121 -279 1 1085 2482 145 7 29 chr13 65592610 65593028 -54691284 - RLTR9E LTR ERVK 0 409 1 1 1085 993 105 6 38 chr13 65593028 65593064 -54691248 + MTB LTR MaLR 122 153 -247 1 1085 784 50 0 0 chr13 65593469 65593568 -54690744 + MTB LTR MaLR 224 322 -4 1 1085 3380 175 28 24 chr13 65593568 65594205 -54690107 + RLTR18-int LTR ERVK 2892 3531 -1830 1 1085 1252 65 0 17 chr13 65594242 65594414 -54689898 - B2_Mm2 SINE B2 -25 170 2 1 1085 952 143 20 0 chr13 65594427 65594574 -54689738 - B1_Mur4 SINE Alu 0 150 1 1 1085 2461 173 160 46 chr13 65594574 65595345 -54688967 + RLTR18-int LTR ERVK 3518 4372 -989 1 1085 767 175 265 0 chr13 65595345 65595511 -54688801 - B3 SINE B2 -5 211 2 1 1085 2461 165 71 76 chr13 65595511 65595646 -54688666 + RLTR18-int LTR ERVK 4373 4511 -850 1 1085 346 172 0 15 chr13 65595650 65595715 -54688597 - RLTR18B LTR ERVK -411 101 38 1 1085 1232 141 131 0 chr13 65595715 65595914 -54688398 + URR1A DNA MER1_type 1 225 -1 1 1085 249 244 37 49 chr13 65595955 65596037 -54688275 + Charlie1b DNA MER1_type 104 184 -339 1 1085 2370 186 77 6 chr13 65596096 65596577 -54687735 - RLTR11A2 LTR ERVK -12 515 1 1 1085 329 301 146 0 chr13 65596699 65596802 -54687510 + RSINE1 SINE B4 15 132 -33 1 1085 326 293 30 91 chr13 65596820 65596833 -54687479 + B4A SINE B4 78 162 -130 1 1085 843 131 28 49 chr13 65596833 65596977 -54687335 + B1_Mur3 SINE Alu 4 144 -5 1 1085 1175 196 13 13 chr13 65596996 65597229 -54687083 - MTC LTR MaLR -8 413 181 1 1085 418 174 11 11 chr13 65597402 65597495 -54686817 + Lx2B LINE L1 6908 7000 0 1 1085 608 244 68 8 chr13 65597515 65597647 -54686665 + B1_Mur2 SINE Alu 1 140 -9 1 1085 225 0 0 0 chr13 65598126 65598151 -54686161 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 1085 432 0 0 0 chr13 65598153 65598201 -54686111 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1085 413 324 91 42 chr13 65598749 65599058 -54685254 + ORR1E LTR MaLR 19 342 -17 1 1085 295 259 0 0 chr13 65599218 65599272 -54685040 - B4 SINE B4 -10 282 229 1 1085 359 73 0 18 chr13 65599284 65599340 -54684972 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1085 478 349 18 35 chr13 65599385 65599670 -54684642 - B4A SINE B4 -12 280 1 1 1085 480 312 43 0 chr13 65599692 65599830 -54684482 - B4 SINE B4 -68 224 81 1 1085 922 156 13 20 chr13 65600476 65600626 -54683686 + B1_Mur4 SINE Alu 1 149 -1 1 1085 722 170 54 47 chr13 65600725 65600873 -54683439 - B1_Mur3 SINE Alu 0 149 1 1 1085 1486 161 172 35 chr13 65601318 65601691 -54682621 + RLTR33 LTR ERVK 1 424 -254 1 1085 21 0 0 0 chr13 65602436 65602457 -54681855 + AT_rich Low_complexity Low_complexity 1 21 0 1 1085 22 88 0 0 chr13 65602526 65602583 -54681729 + AT_rich Low_complexity Low_complexity 1 57 0 1 1085 239 254 0 27 chr13 65603684 65603757 -54680555 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 1 1085 219 149 39 51 chr13 65603770 65603848 -54680464 + (CCCTAA)n Simple_repeat Simple_repeat 6 82 0 1 1085 239 233 16 16 chr13 65603853 65603914 -54680398 + MT2A LTR ERVL 72 132 -401 1 1085 1384 243 65 58 chr13 65605195 65605714 -54678598 - L1_Mur3 LINE L1 -4044 1836 1314 1 1085 429 267 81 0 chr13 65606033 65606205 -54678107 - L1_Mur3 LINE L1 -6637 1091 906 1 1085 180 0 0 0 chr13 65606217 65606237 -54678075 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1 1085 1060 124 0 0 chr13 65606237 65606382 -54677930 - B1_Mus2 SINE Alu -2 145 1 1 1085 602 322 91 62 chr13 65608496 65608837 -54675475 + MTD LTR MaLR 53 403 -16 1 1085 453 363 48 35 chr13 65608863 65609193 -54675119 + MTD-int LTR MaLR 2 361 -1219 1 1085 5807 211 39 25 chr13 65609234 65610714 -54673598 - Lx4B LINE L1 0 7058 5658 1 1085 869 169 0 0 chr13 65610764 65610912 -54673400 + MurSatRep1 Unknown Unknown 1 148 -1989 1 1085 383 311 76 0 chr13 65610917 65611036 -54673276 - B1_Mur2 SINE Alu -17 132 5 1 1085 6771 240 66 29 chr13 65611038 65613983 -54670329 + MurSatRep1 Unknown Unknown 282 2137 0 1 1085 494 255 28 24 chr13 65613927 65614316 -54669996 + MMSAT4 Satellite Satellite 1 390 0 1 1085 360 295 83 73 chr13 65614186 65614486 -54669826 + MurSatRep1 Unknown Unknown 1747 2049 -88 1 1085 294 287 30 17 chr13 65614612 65614819 -54669493 + MMSAT4 Satellite Satellite 1 209 -12 1 1085 256 331 15 8 chr13 65615102 65615236 -54669076 + MMSAT4 Satellite Satellite 34 168 0 1 1085 2517 152 17 15 chr13 65615384 65615792 -54668520 + RLTR9E LTR ERVK 1 409 0 1 1085 267 278 18 18 chr13 65615792 65615902 -54668410 + MMSAT4 Satellite Satellite 59 168 0 1 1085 233 309 32 11 chr13 65615857 65615952 -54668360 + MurSatRep1 Unknown Unknown 1832 1928 -209 1 1085 1433 242 13 43 chr13 65615953 65616329 -54667983 + ORR1A4 LTR MaLR 29 393 -1 1 1085 5489 196 121 124 chr13 65616330 65616695 -54667617 + ORR1A4-int LTR MaLR 1 463 -1500 1 1085 1100 95 0 0 chr13 65616695 65616832 -54667480 + B1_Mm SINE Alu 2 138 -9 1 1085 1217 90 0 6 chr13 65616832 65617010 -54667302 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 1 1085 5489 196 121 124 chr13 65617010 65618333 -54665979 + ORR1A4-int LTR MaLR 464 1759 -204 1 1085 1020 124 14 20 chr13 65618333 65618481 -54665831 + B1_Mus1 SINE Alu 1 147 -1 1 1085 5489 196 121 124 chr13 65618481 65618759 -54665553 + ORR1A4-int LTR MaLR 1760 1962 -1 1 1085 1637 196 0 67 chr13 65618759 65619103 -54665209 + ORR1A4 LTR MaLR 1 321 -8 1 1085 2494 59 21 45 chr13 65619677 65620012 -54664300 + IAPLTR2b LTR ERVK 1 327 0 1 1085 598 124 16 124 chr13 65620013 65620142 -54664170 + IAPEz-int LTR ERVK 9 123 -6358 1 1085 231 267 0 0 chr13 65620142 65620187 -54664125 + RLTR27 LTR ERVK 231 275 -34 1 1085 3655 65 6 21 chr13 65620190 65620846 -54663466 + IAPEz-int LTR ERVK 94 662 -5819 1 1085 2747 61 0 3 chr13 65620846 65621189 -54663123 + IAPEz-int LTR ERVK 1359 1700 -4781 1 1085 6536 61 12 6 chr13 65621182 65622006 -54662306 + IAPEz-int LTR ERVK 5651 6479 -2 1 1085 2326 97 3 9 chr13 65622008 65622342 -54661970 + IAPLTR2b LTR ERVK 1 332 -5 1 1085 229 294 37 67 chr13 65622578 65622622 -54661690 + MurSatRep1 Unknown Unknown 1891 1929 -208 1 1085 1657 53 0 0 chr13 65622622 65622810 -54661502 - B2_Mm1t SINE B2 -5 188 1 1 1085 229 294 37 67 chr13 65622810 65622929 -54661383 + MurSatRep1 Unknown Unknown 1930 2049 -88 1 1085 7872 210 54 50 chr13 65623270 65625621 -54658691 - L1_Mur3 LINE L1 -1568 4312 1953 1 1085 7357 61 7 42 chr13 65625640 65626231 -54658081 - L1_Mus2 LINE L1 -3 6563 6011 1 1085 1110 79 7 7 chr13 65626231 65626372 -54657940 - B1_Mus1 SINE Alu -7 141 1 1 1085 7357 72 8 32 chr13 65626372 65626921 -54657391 - L1_Mus2 LINE L1 -556 6010 5458 1 1085 3850 105 5 2 chr13 65626920 65627481 -54656831 - L1_Mus2 LINE L1 -1032 4851 4289 1 1085 1903 154 96 6 chr13 65628191 65628557 -54655755 - Lx2B LINE L1 -3 6997 6599 1 1085 1618 204 15 6 chr13 65628565 65628896 -54655416 - Lx2B LINE L1 -628 6372 6039 1 1085 1458 112 18 9 chr13 65628896 65629122 -54655190 + RMER16-int LTR ERVK 1762 1989 -3417 1 1085 1500 181 15 50 chr13 65629131 65629469 -54654843 - ORR1A3-int LTR MaLR -449 1514 1189 1 1085 487 247 23 147 chr13 65630552 65630770 -54653542 - B2_Mm2 SINE B2 0 195 5 1 1085 21 57 0 0 chr13 65631051 65631086 -54653226 + AT_rich Low_complexity Low_complexity 1 35 0 2 1085 229 292 62 67 chr13 65631240 65631449 -54652863 - RLTR25A LTR ERVK -1 1102 895 2 1085 297 102 64 18 chr13 65631585 65631695 -54652617 + (CA)n Simple_repeat Simple_repeat 1 115 0 2 1085 245 205 50 60 chr13 65631706 65631888 -54652424 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1085 333 0 0 0 chr13 65631925 65631962 -54652350 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1085 523 298 92 84 chr13 65633837 65634064 -54650248 - LTRIS4 LTR ERV1 0 512 284 2 1085 2156 186 50 13 chr13 65634881 65635336 -54648976 + RLTR1 LTR ERV1 132 624 0 2 1085 378 0 0 0 chr13 65635803 65635845 -54648467 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1085 39947 31 3 6 chr13 65636114 65641861 -54642451 + L1Md_T LINE L1 422 6144 -438 2 1085 294 316 46 7 chr13 65642183 65642336 -54641976 - MurSatRep1 Unknown Unknown -88 2049 1891 2 1085 4395 216 101 146 chr13 65643134 65645343 -54638969 - ORR1B1-int LTR MaLR 0 1792 15 2 1085 1123 118 0 0 chr13 65645343 65645487 -54638825 - B1_Mus2 SINE Alu -1 146 3 2 1085 4395 197 129 159 chr13 65645487 65645856 -54638456 - ORR1B1-int LTR MaLR -1512 451 1 2 1085 1534 236 6 38 chr13 65645856 65646221 -54638091 - ORR1B1 LTR MaLR 0 394 42 2 1085 253 303 0 0 chr13 65646279 65646355 -54637957 - MMSAT4 Satellite Satellite -76 92 17 2 1085 2360 142 22 25 chr13 65646397 65646801 -54637511 - RLTR9E LTR ERVK 0 409 7 2 1085 235 325 54 58 chr13 65646812 65647073 -54637239 - MurSatRep1 Unknown Unknown -119 2018 1759 2 1085 283 344 37 30 chr13 65647286 65647583 -54636729 - MurSatRep1 Unknown Unknown -88 2049 1751 2 1085 380 256 25 25 chr13 65647817 65647937 -54636375 - MMSAT4 Satellite Satellite -22 146 27 2 1085 656 307 58 40 chr13 65647877 65648345 -54635967 - MurSatRep1 Unknown Unknown 0 2137 1747 2 1085 504 241 33 33 chr13 65648299 65648449 -54635863 - MMSAT4 Satellite Satellite 0 168 19 2 1085 625 295 67 45 chr13 65648381 65649340 -54634972 - MurSatRep1 Unknown Unknown 0 2137 1747 2 1085 409 271 36 36 chr13 65649223 65649361 -54634951 - MMSAT4 Satellite Satellite 0 168 31 2 1085 8995 201 63 21 chr13 65649389 65651441 -54632871 - MurSatRep1 Unknown Unknown 0 2137 1 2 1085 410 366 27 21 chr13 65651537 65651724 -54632588 + B3 SINE B2 2 189 -27 2 1085 217 191 21 0 chr13 65651978 65652025 -54632287 + B1_Mus2 SINE Alu 100 147 0 2 1085 835 182 6 0 chr13 65652162 65652321 -54631991 - MurSatRep1 Unknown Unknown -1977 160 1 2 1085 6319 209 28 19 chr13 65652370 65653854 -54630458 + Lx4B LINE L1 5644 7058 0 2 1085 462 367 38 28 chr13 65653895 65654226 -54630086 - ORR1B1-int LTR MaLR -1219 361 2 2 1085 653 344 82 53 chr13 65654252 65654593 -54629719 - ORR1B1 LTR MaLR -16 403 53 2 1085 1095 91 28 0 chr13 65656913 65657056 -54627256 + B1_Mus2 SINE Alu 1 147 0 2 1085 463 256 81 6 chr13 65657082 65657255 -54627057 + L1_Mur3 LINE L1 906 1091 -6637 2 1085 1293 245 54 87 chr13 65657584 65657849 -54626463 + L1_Mur3 LINE L1 1314 1595 -4285 2 1085 1574 63 5 0 chr13 65657849 65658038 -54626274 + B2_Mm1t SINE B2 2 191 -2 2 1085 1293 245 54 87 chr13 65658038 65658313 -54625999 + L1_Mur3 LINE L1 1596 1836 -4044 2 1085 237 167 0 69 chr13 65659193 65659251 -54625061 + (TTAGGG)n Simple_repeat Simple_repeat 5 58 0 2 1085 30 77 0 0 chr13 65659741 65659806 -54624506 + AT_rich Low_complexity Low_complexity 1 65 0 2 1085 223 306 61 10 chr13 65661262 65661361 -54622951 + B1_Mus1 SINE Alu 9 112 -36 2 1085 26 30 0 0 chr13 65661850 65661883 -54622429 + AT_rich Low_complexity Low_complexity 1 33 0 2 1085 1509 161 168 37 chr13 65662365 65662740 -54621572 - RLTR33 LTR ERVK -254 424 1 2 1085 320 254 107 58 chr13 65663020 65663141 -54621171 - B1_Mur1 SINE Alu -1 148 22 2 1085 579 29 0 0 chr13 65663183 65663252 -54621060 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 1085 21 71 0 0 chr13 65663317 65663359 -54620953 + AT_rich Low_complexity Low_complexity 1 42 0 2 1085 308 248 43 0 chr13 65663362 65663479 -54620833 + (TG)n Simple_repeat Simple_repeat 1 122 0 2 1085 276 137 0 0 chr13 65663560 65663611 -54620701 + (TATG)n Simple_repeat Simple_repeat 4 54 0 2 1085 729 313 65 20 chr13 65664652 65665050 -54619262 + Lx9 LINE L1 7202 7617 -27 2 1085 26 64 0 0 chr13 65666237 65666284 -54618028 + AT_rich Low_complexity Low_complexity 1 47 0 2 1086 807 167 0 12 chr13 65667774 65667938 -54616374 - Lx2 LINE L1 -67 6930 6769 2 1086 355 97 0 0 chr13 65667945 65668007 -54616305 + Lx2 LINE L1 6935 6996 -1 2 1086 37 23 0 0 chr13 65668134 65668178 -54616134 + AT_rich Low_complexity Low_complexity 1 44 0 2 1086 231 36 0 0 chr13 65668926 65668954 -54615358 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2 1086 1293 87 40 0 chr13 65668957 65669130 -54615182 - B2_Mm2 SINE B2 -15 180 1 2 1086 27128 75 15 1 chr13 65669154 65673051 -54611261 + L1Md_F2 LINE L1 1635 5586 -297 2 1086 7428 75 4 15 chr13 65673051 65674058 -54610254 + L1Md_F2 LINE L1 5587 6582 0 2 1086 1147 68 7 0 chr13 65674303 65674450 -54609862 - B1_Mus1 SINE Alu 0 148 1 2 1086 27 49 0 0 chr13 65675810 65675851 -54608461 + AT_rich Low_complexity Low_complexity 1 41 0 2 1086 258 196 18 0 chr13 65675851 65675907 -54608405 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1086 23 0 0 0 chr13 65676648 65676671 -54607641 + AT_rich Low_complexity Low_complexity 1 23 0 2 1086 1102 56 21 7 chr13 65677516 65677661 -54606651 + B1_Mus2 SINE Alu 1 147 0 2 1086 186 71 0 0 chr13 65677693 65677721 -54606591 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 2 1086 220 208 0 0 chr13 65679623 65679676 -54604636 + A-rich Low_complexity Low_complexity 1 53 0 2 1086 212 200 0 16 chr13 65679997 65680058 -54604254 + CT-rich Low_complexity Low_complexity 2 61 0 2 1086 789 11 0 0 chr13 65681095 65681185 -54603127 + (TC)n Simple_repeat Simple_repeat 1 90 0 2 1086 1031 105 0 27 chr13 65681189 65681336 -54602976 - B1_Mus2 SINE Alu -4 143 1 2 1086 758 183 20 14 chr13 65681419 65681615 -54602697 - L1_Mur3 LINE L1 -1864 4276 4062 2 1086 204 40 0 0 chr13 65681617 65681642 -54602670 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1086 7407 178 34 19 chr13 65681992 65682806 -54601506 + L1_Mur2 LINE L1 677 1515 -4371 2 1086 1857 129 112 0 chr13 65682806 65683100 -54601212 + ORR1A2 LTR MaLR 1 327 0 2 1086 7407 251 27 73 chr13 65683100 65683841 -54600471 + L1_Mur2 LINE L1 1516 2231 -3655 2 1086 1635 42 0 0 chr13 65683841 65684034 -54600278 + B2_Mm1t SINE B2 1 193 0 2 1086 7407 251 27 73 chr13 65684034 65685833 -54598479 + L1_Mur2 LINE L1 2232 3926 -1960 2 1086 1341 92 11 0 chr13 65685833 65686017 -54598295 + B2_Mm2 SINE B2 1 186 -9 2 1086 7407 251 27 73 chr13 65686017 65686250 -54598062 + L1_Mur2 LINE L1 3927 4142 -1744 2 1086 1985 73 26 0 chr13 65686244 65686546 -54597766 - MusHAL1 LINE L1 -733 1979 1670 2 1086 294 267 96 30 chr13 65686546 65686681 -54597631 + B1_Mm SINE Alu 4 147 0 2 1086 257 130 0 53 chr13 65686689 65686715 -54597597 + polypurine Low_complexity Low_complexity 3 27 0 2 1086 1073 90 0 22 chr13 65686715 65686896 -54597416 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 2 1086 257 130 0 53 chr13 65686896 65686926 -54597386 + polypurine Low_complexity Low_complexity 28 56 0 2 1086 414 0 0 0 chr13 65687135 65687181 -54597131 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1086 594 0 0 0 chr13 65687219 65687285 -54597027 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 1086 2785 154 101 48 chr13 65687327 65687892 -54596420 - RLTR33 LTR ERVK -83 595 1 2 1086 202 97 0 31 chr13 65688148 65688180 -54596132 + (CATG)n Simple_repeat Simple_repeat 2 32 0 2 1086 280 307 122 48 chr13 65688188 65688335 -54595977 - B4A SINE B4 -41 251 94 2 1086 311 294 122 38 chr13 65688209 65688340 -54595972 - B1_Mus1 SINE Alu -1 147 6 2 1086 195 69 0 0 chr13 65688365 65688394 -54595918 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1086 312 120 0 0 chr13 65688417 65688467 -54595845 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1086 441 97 58 0 chr13 65690629 65690732 -54593580 + (TG)n Simple_repeat Simple_repeat 1 109 0 2 1086 525 239 23 144 chr13 65691574 65691789 -54592523 + B2_Mm2 SINE B2 7 195 0 2 1086 564 236 14 7 chr13 65692602 65692743 -54591569 - Lx7 LINE L1 -810 6886 6745 2 1086 21 0 0 0 chr13 65692947 65692968 -54591344 + AT_rich Low_complexity Low_complexity 1 21 0 2 1086 286 224 91 10 chr13 65693549 65693648 -54590664 - ORR1E LTR MaLR -15 404 298 2 1086 3490 104 4 4 chr13 65693654 65694202 -54590110 + L1_Mus2 LINE L1 4304 4851 -1032 2 1086 6828 76 6 34 chr13 65694201 65694752 -54589560 + L1_Mus2 LINE L1 5458 6010 -556 2 1086 991 93 7 7 chr13 65694752 65694893 -54589419 + B1_Mus1 SINE Alu 1 141 -7 2 1086 6828 64 5 42 chr13 65694893 65695485 -54588827 + L1_Mus2 LINE L1 6011 6563 -3 2 1086 1044 223 59 89 chr13 65695507 65695617 -54588695 + L1_Mur3 LINE L1 1965 2057 -3823 2 1086 210 37 0 0 chr13 65695617 65695644 -54588668 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1086 1044 223 59 89 chr13 65695644 65695971 -54588341 + L1_Mur3 LINE L1 2058 2389 -3491 2 1086 423 383 21 26 chr13 65695986 65696219 -54588093 + B4A SINE B4 60 291 -1 2 1086 635 65 0 11 chr13 65696253 65696347 -54587965 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 1086 297 259 0 0 chr13 65696359 65696413 -54587899 + B4 SINE B4 229 282 -10 2 1086 406 326 97 48 chr13 65696573 65696882 -54587430 - ORR1E LTR MaLR -17 342 19 2 1086 333 0 0 0 chr13 65697428 65697465 -54586847 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1086 218 32 0 31 chr13 65697943 65697975 -54586337 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 2 1086 625 205 70 8 chr13 65697975 65698103 -54586209 - B1_Mur2 SINE Alu -13 136 1 2 1086 315 192 14 0 chr13 65698142 65698215 -54586097 - Lx2B LINE L1 -19 6981 6908 2 1086 1284 100 11 0 chr13 65698224 65698414 -54585898 - B2_Mm1t SINE B2 0 193 2 2 1086 3449 20 5 0 chr13 65698499 65698893 -54585419 - MTA_Mm LTR MaLR 0 396 1 2 1086 1156 216 4 4 chr13 65698989 65699221 -54585091 + MTC LTR MaLR 182 413 -8 2 1086 1689 31 0 0 chr13 65699242 65699435 -54584877 - B2_Mm1t SINE B2 0 193 1 2 1086 803 150 27 48 chr13 65699440 65699587 -54584725 - B1_Mur3 SINE Alu -2 147 4 2 1086 381 331 118 0 chr13 65699606 65699733 -54584579 - RSINE1 SINE B4 -21 144 3 2 1086 606 231 0 0 chr13 65699821 65699929 -54584383 + PB1D9 SINE Alu 3 110 -10 2 1086 700 299 39 5 chr13 65699991 65700199 -54584113 + B3 SINE B2 2 216 0 2 1086 255 103 0 0 chr13 65700276 65700315 -54583997 + (ATTG)n Simple_repeat Simple_repeat 1 39 0 2 1086 817 189 14 7 chr13 65700315 65700454 -54583858 - B1_Mus1 SINE Alu -6 142 3 2 1086 372 347 78 67 chr13 65700557 65700844 -54583468 - MLT1G1 LTR MaLR -235 344 90 2 1086 204 430 0 0 chr13 65701138 65701238 -54583074 + L2a LINE L2 3046 3145 -281 3 1086 1214 203 72 90 chr13 65701356 65701832 -54582480 - MT2B LTR ERVL 0 601 6 3 1086 588 274 8 25 chr13 65701893 65702013 -54582299 + RSINE1 SINE B4 18 135 -30 3 1086 750 237 21 48 chr13 65702207 65702393 -54581919 + B3A SINE B2 1 181 -17 3 1086 27 29 0 0 chr13 65702393 65702427 -54581885 + AT_rich Low_complexity Low_complexity 1 34 0 3 1086 428 229 205 0 chr13 65702438 65702560 -54581752 + B1_Mur2 SINE Alu 3 149 0 3 1086 296 312 0 12 chr13 65702567 65702648 -54581664 + GA-rich Low_complexity Low_complexity 3 82 0 3 1086 2414 188 75 6 chr13 65702690 65703172 -54581140 + RLTR11A2 LTR ERVK 1 515 -12 3 1086 1025 166 131 0 chr13 65703354 65703553 -54580759 - URR1A DNA MER1_type -1 225 1 3 1086 376 172 0 0 chr13 65703553 65703617 -54580695 + RLTR18B LTR ERVK 38 101 -411 3 1086 490 186 84 15 chr13 65703621 65703752 -54580560 - RLTR18-int LTR ERVK -850 4511 4372 3 1086 674 161 0 3 chr13 65703756 65703877 -54580435 + B3 SINE B2 2 119 -76 3 1086 1876 165 165 21 chr13 65703925 65704681 -54579631 - RLTR18-int LTR ERVK -976 4385 3521 3 1086 847 149 21 0 chr13 65704684 65704825 -54579487 + B1_Mur4 SINE Alu 1 144 -6 3 1086 1194 83 0 18 chr13 65704842 65705013 -54579299 + B2_Mm2 SINE B2 2 169 -26 3 1086 2484 208 43 25 chr13 65705030 65705662 -54578650 - RLTR18-int LTR ERVK -1811 3550 2908 3 1086 2137 69 0 0 chr13 65705666 65705942 -54578370 + RLTR10A LTR ERVK 1 276 -135 3 1086 1746 156 7 0 chr13 65705943 65706219 -54578093 + RLTR27 LTR ERVK 32 309 0 3 1086 780 50 0 0 chr13 65706237 65706336 -54577976 - MTB_Mm LTR MaLR -4 322 224 3 1086 942 106 6 44 chr13 65706741 65706777 -54577535 - MTB_Mm LTR MaLR -255 152 116 3 1086 2225 157 5 26 chr13 65706777 65707195 -54577117 + RLTR9E LTR ERVK 1 409 0 3 1086 942 106 6 44 chr13 65707195 65707316 -54576996 - MTB_Mm LTR MaLR -292 115 1 3 1086 307 275 66 38 chr13 65707417 65707523 -54576789 - PB1D10 SINE Alu -5 112 4 3 1086 888 178 11 8 chr13 65707592 65707859 -54576453 + CT-rich Low_complexity Low_complexity 1 268 0 3 1086 3909 107 40 29 chr13 65707962 65708587 -54575725 + L1_Mus4 LINE L1 6005 6636 0 3 1086 34 24 0 0 chr13 65708662 65708703 -54575609 + AT_rich Low_complexity Low_complexity 1 41 0 3 1086 243 277 68 102 chr13 65708861 65709066 -54575246 - RLTR25A LTR ERVK -9 1094 897 3 1086 264 30 0 0 chr13 65709253 65709286 -54575026 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1086 4227 108 3 2 chr13 65710676 65711262 -54573050 - LTRIS_Mus LTR ERV1 0 587 1 3 1086 582 284 43 52 chr13 65711990 65712220 -54572092 - LTRIS4 LTR ERV1 0 507 280 3 1086 194 143 20 0 chr13 65712815 65712864 -54571448 + G-rich Low_complexity Low_complexity 1 50 0 3 1086 27 0 0 0 chr13 65713266 65713293 -54571019 + AT_rich Low_complexity Low_complexity 1 27 0 3 1086 370 247 16 84 chr13 65713378 65713499 -54570813 - B4 SINE B4 -75 217 90 3 1086 240 376 57 0 chr13 65714021 65714162 -54570150 + LTRIS_Mm LTR ERV1 271 419 -63 3 1086 271 325 4 4 chr13 65714427 65714637 -54569675 - MMSAT4 Satellite Satellite 0 210 1 3 1086 298 283 32 32 chr13 65714676 65714800 -54569512 - MMSAT4 Satellite Satellite -1 167 44 3 1086 352 167 0 0 chr13 65714845 65714899 -54569413 + RLTR45 LTR ERVK 312 365 -117 3 1086 399 301 30 25 chr13 65714929 65715127 -54569185 - MurSatRep1 Unknown Unknown -88 2049 1851 3 1086 287 308 7 15 chr13 65715017 65715152 -54569160 - MMSAT4 Satellite Satellite 0 168 35 3 1086 298 281 23 23 chr13 65715188 65715399 -54568913 - MMSAT4 Satellite Satellite -5 211 1 3 1086 8671 195 28 50 chr13 65715434 65715646 -54568666 - MurSatRep1 Unknown Unknown -1 2136 1924 3 1086 1120 91 0 0 chr13 65715646 65715789 -54568523 - B1_Mus1 SINE Alu -5 143 1 3 1086 8671 195 28 50 chr13 65715789 65716678 -54567634 - MurSatRep1 Unknown Unknown -214 1923 1090 3 1086 727 95 0 272 chr13 65716678 65716880 -54567432 - B1_Mus1 SINE Alu 0 148 2 3 1086 8671 195 28 50 chr13 65716880 65717959 -54566353 - MurSatRep1 Unknown Unknown -1048 1089 1 3 1086 226 288 15 0 chr13 65718463 65718529 -54565783 + B1_Mur3 SINE Alu 83 149 0 3 1086 21 0 0 0 chr13 65718531 65718552 -54565760 + AT_rich Low_complexity Low_complexity 1 21 0 3 1086 1111 159 9 9 chr13 65718759 65718969 -54565343 + Lx4B LINE L1 6690 6899 -159 3 1086 444 256 40 18 chr13 65719545 65719772 -54564540 + L1_Mur3 LINE L1 860 1091 -6637 3 1086 1107 256 57 39 chr13 65720091 65720604 -54563708 + L1_Mur3 LINE L1 1314 1835 -4045 3 1086 267 31 0 0 chr13 65720610 65720642 -54563670 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1086 338 43 0 0 chr13 65720642 65720689 -54563623 - B1_Mm SINE Alu 0 147 101 3 1086 306 0 0 0 chr13 65720689 65720723 -54563589 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1086 1289 14 0 0 chr13 65720723 65720869 -54563443 - B1_Mm SINE Alu 0 147 2 3 1086 362 338 25 78 chr13 65721966 65722210 -54562102 - MT2A LTR ERVL -228 305 75 3 1086 251 100 60 0 chr13 65722294 65722344 -54561968 + (TTAGGG)n Simple_repeat Simple_repeat 6 58 0 3 1086 1574 33 22 0 chr13 65723609 65723793 -54560519 + B2_Mm1t SINE B2 1 188 -5 3 1086 750 128 17 0 chr13 65723982 65724099 -54560213 - PB1D9 SINE Alu 0 120 2 3 1086 918 178 0 0 chr13 65724640 65724988 -54559324 + MMSAT4 Satellite Satellite 1 348 0 3 1086 1126 68 0 7 chr13 65725483 65725630 -54558682 - B1_Mm SINE Alu 0 147 2 3 1086 473 351 28 9 chr13 65725653 65725866 -54558446 + RMER15 LTR ERVL 258 474 -101 3 1086 4295 94 24 5 chr13 65726687 65727307 -54557005 - L1_Mus4 LINE L1 0 6636 6005 3 1086 198 232 10 31 chr13 65727429 65727487 -54556825 + GA-rich Low_complexity Low_complexity 2 59 0 3 1086 1085 82 0 7 chr13 65727487 65727635 -54556677 + B1_Mus2 SINE Alu 1 147 0 3 1086 198 232 10 31 chr13 65727635 65727674 -54556638 + polypurine Low_complexity Low_complexity 60 97 0 3 1086 1091 114 0 6 chr13 65727674 65727850 -54556462 + (GGAGAA)n Simple_repeat Simple_repeat 1 175 0 3 1086 260 275 0 91 chr13 65727896 65727984 -54556328 + B4A SINE B4 89 168 -124 3 1086 370 226 72 41 chr13 65727905 65728002 -54556310 + PB1D10 SINE Alu 13 112 -5 3 1086 21 0 0 0 chr13 65728059 65728080 -54556232 + AT_rich Low_complexity Low_complexity 1 21 0 3 1086 987 105 6 38 chr13 65728109 65728230 -54556082 + MTB LTR MaLR 1 121 -279 3 1086 2334 143 7 29 chr13 65728230 65728648 -54555664 - RLTR9E LTR ERVK 0 409 1 3 1086 987 105 6 38 chr13 65728648 65728684 -54555628 + MTB LTR MaLR 122 153 -247 3 1086 761 61 0 0 chr13 65729088 65729187 -54555125 + MTB LTR MaLR 224 322 -4 3 1086 3061 177 28 24 chr13 65729187 65729824 -54554488 + RLTR18-int LTR ERVK 2892 3531 -1830 3 1086 1200 83 0 17 chr13 65729861 65730033 -54554279 - B2_Mm2 SINE B2 -25 170 2 3 1086 857 157 20 0 chr13 65730047 65730194 -54554118 - B1_Mur4 SINE Alu 0 150 1 3 1086 2139 171 160 46 chr13 65730194 65730965 -54553347 + RLTR18-int LTR ERVK 3518 4372 -989 3 1086 713 181 265 0 chr13 65730965 65731131 -54553181 - B3 SINE B2 -5 211 2 3 1086 2139 170 71 76 chr13 65731131 65731266 -54553046 + RLTR18-int LTR ERVK 4373 4511 -850 3 1086 344 172 0 15 chr13 65731270 65731335 -54552977 - RLTR18B LTR ERVK -411 101 38 3 1086 1094 151 131 0 chr13 65731335 65731534 -54552778 + URR1A DNA MER1_type 1 225 -1 3 1086 2336 199 77 6 chr13 65731716 65732197 -54552115 - RLTR11A2 LTR ERVK -12 515 1 3 1086 322 324 137 0 chr13 65732321 65732423 -54551889 + RSINE1 SINE B4 17 132 -33 3 1086 339 293 30 91 chr13 65732441 65732456 -54551856 + B4A SINE B4 78 168 -124 3 1086 882 131 28 35 chr13 65732456 65732598 -54551714 + B1_Mur4 SINE Alu 5 145 -5 3 1086 1163 216 4 4 chr13 65732617 65732849 -54551463 - MTC LTR MaLR -8 413 182 3 1086 371 185 11 11 chr13 65733023 65733116 -54551196 + Lx2B LINE L1 6908 7000 0 3 1086 563 236 70 8 chr13 65733136 65733264 -54551048 + B1_Mur2 SINE Alu 1 136 -13 3 1086 218 32 0 31 chr13 65733264 65733296 -54551016 + (CCAA)n Simple_repeat Simple_repeat 4 34 0 3 1086 582 15 0 0 chr13 65733749 65733816 -54550496 + (TC)n Simple_repeat Simple_repeat 1 67 0 3 1086 429 20 0 0 chr13 65733818 65733868 -54550444 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1086 414 338 86 38 chr13 65734409 65734723 -54549589 + ORR1E LTR MaLR 14 342 -17 3 1086 297 259 0 0 chr13 65734883 65734937 -54549375 - B4 SINE B4 -10 282 229 3 1086 217 150 0 24 chr13 65734951 65734992 -54549320 + (TG)n Simple_repeat Simple_repeat 1 40 0 3 1086 614 376 14 30 chr13 65735023 65735319 -54548993 - B4A SINE B4 -1 291 1 3 1086 533 355 62 0 chr13 65735341 65735552 -54548760 - B4 SINE B4 -68 224 1 3 1086 877 162 13 7 chr13 65736127 65736276 -54548036 + B1_Mur4 SINE Alu 1 150 0 3 1086 662 170 54 47 chr13 65736375 65736523 -54547789 - B1_Mur3 SINE Alu 0 149 1 3 1086 1485 161 172 35 chr13 65736968 65737341 -54546971 + RLTR33 LTR ERVK 1 424 -254 3 1086 1556 27 27 0 chr13 65738090 65738277 -54546035 + B2_Mm1a SINE B2 2 193 0 3 1086 21 0 0 0 chr13 65738283 65738304 -54546008 + AT_rich Low_complexity Low_complexity 1 21 0 3 1086 22 88 0 0 chr13 65738373 65738430 -54545882 + AT_rich Low_complexity Low_complexity 1 57 0 3 1086 239 254 0 27 chr13 65739529 65739602 -54544710 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 3 1086 219 149 39 51 chr13 65739615 65739693 -54544619 + (CCCTAA)n Simple_repeat Simple_repeat 6 82 0 3 1086 242 233 16 16 chr13 65739698 65739759 -54544553 + MT2A LTR ERVL 72 132 -401 3 1086 1164 245 65 58 chr13 65741041 65741560 -54542752 - L1_Mur3 LINE L1 -4044 1836 1314 3 1086 365 267 81 0 chr13 65741879 65742051 -54542261 - L1_Mur3 LINE L1 -6637 1091 906 3 1086 180 0 0 0 chr13 65742063 65742083 -54542229 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 3 1086 963 138 0 0 chr13 65742083 65742228 -54542084 - B1_Mus2 SINE Alu -2 145 1 3 1086 677 326 97 43 chr13 65744329 65744681 -54539631 + MTD LTR MaLR 33 403 -16 3 1086 498 373 34 27 chr13 65744707 65745035 -54539277 + MTD-int LTR MaLR 2 331 -1039 3 1086 5222 208 50 22 chr13 65745084 65746423 -54537889 - Lx4B LINE L1 -6 7052 5677 3 1086 394 209 16 57 chr13 65746423 65746545 -54537767 - Lx5 LINE L1 -606 6452 6334 3 1086 796 169 0 0 chr13 65746594 65746742 -54537570 + MurSatRep1 Unknown Unknown 1 148 -1989 3 1086 331 311 76 0 chr13 65746747 65746866 -54537446 - B1_Mur2 SINE Alu -17 132 5 3 1086 6543 209 70 16 chr13 65746868 65748436 -54535876 + MurSatRep1 Unknown Unknown 282 1944 -193 3 1086 456 19 0 0 chr13 65748436 65748489 -54535823 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 1086 6543 272 67 41 chr13 65748489 65748877 -54535435 + MurSatRep1 Unknown Unknown 1747 2004 -133 3 1086 451 275 0 0 chr13 65748877 65749015 -54535297 + MMSAT4 Satellite Satellite 31 168 0 3 1086 6543 272 67 41 chr13 65749015 65749044 -54535268 + MurSatRep1 Unknown Unknown 2005 2023 -114 3 1086 487 273 0 0 chr13 65749044 65749183 -54535129 + MMSAT4 Satellite Satellite 30 168 0 4 1086 6543 272 67 41 chr13 65749183 65749352 -54534960 + MurSatRep1 Unknown Unknown 2024 2137 0 3 1086 430 261 23 23 chr13 65749296 65749687 -54534625 + MMSAT4 Satellite Satellite 1 391 0 4 1086 296 297 56 51 chr13 65749557 65749857 -54534455 + MurSatRep1 Unknown Unknown 1747 2049 -88 4 1086 250 279 30 17 chr13 65749983 65750183 -54534129 + MMSAT4 Satellite Satellite 1 202 -12 4 1086 2363 152 17 15 chr13 65750755 65751163 -54533149 + RLTR9E LTR ERVK 1 409 0 4 1086 1480 244 13 43 chr13 65751324 65751700 -54532612 + ORR1A4 LTR MaLR 29 393 -1 4 1086 4835 204 131 128 chr13 65751701 65752066 -54532246 + ORR1A4-int LTR MaLR 1 463 -1500 4 1086 1050 82 0 0 chr13 65752066 65752200 -54532112 + B1_Mm SINE Alu 2 135 -12 4 1086 916 108 7 7 chr13 65752200 65752349 -54531963 + (GAAA)n Simple_repeat Simple_repeat 2 150 0 4 1086 4835 204 131 128 chr13 65752349 65753661 -54530651 + ORR1A4-int LTR MaLR 464 1759 -204 4 1086 1005 110 14 20 chr13 65753661 65753809 -54530503 + B1_Mus1 SINE Alu 1 147 -1 4 1086 4835 204 131 128 chr13 65753809 65754087 -54530225 + ORR1A4-int LTR MaLR 1760 1962 -1 4 1086 1679 193 0 72 chr13 65754087 65754433 -54529879 + ORR1A4 LTR MaLR 1 321 -8 4 1086 1608 42 0 0 chr13 65755279 65755468 -54528844 - B2_Mm1t SINE B2 -4 189 1 4 1086 6957 216 46 47 chr13 65755928 65758279 -54526033 - L1_Mur3 LINE L1 -1568 4312 1965 4 1086 6829 60 7 45 chr13 65758305 65758900 -54525412 - L1_Mus2 LINE L1 -3 6563 6011 4 1086 1057 71 7 7 chr13 65758900 65759041 -54525271 - B1_Mus1 SINE Alu -7 141 1 4 1086 6829 71 8 35 chr13 65759041 65759590 -54524722 - L1_Mus2 LINE L1 -556 6010 5458 4 1086 3560 102 4 2 chr13 65759589 65760140 -54524172 - L1_Mus2 LINE L1 -1032 4851 4300 4 1086 236 284 74 0 chr13 65760140 65760221 -54524091 + MTD LTR MaLR 298 384 -35 4 1086 1928 146 96 6 chr13 65760863 65761227 -54523085 - Lx2B LINE L1 -5 6995 6599 4 1086 1549 195 15 6 chr13 65761235 65761566 -54522746 - Lx2B LINE L1 -628 6372 6039 4 1086 1387 107 18 4 chr13 65761566 65761791 -54522521 + RMER16-int LTR ERVK 1762 1989 -3417 4 1086 1507 174 15 50 chr13 65761800 65762138 -54522174 - ORR1A3-int LTR MaLR -449 1514 1189 4 1086 529 239 23 140 chr13 65763223 65763437 -54520875 - B2_Mm2 SINE B2 0 195 7 4 1086 21 57 0 0 chr13 65763722 65763757 -54520555 + AT_rich Low_complexity Low_complexity 1 35 0 4 1086 297 102 64 18 chr13 65764256 65764366 -54519946 + (CA)n Simple_repeat Simple_repeat 1 115 0 4 1086 269 209 44 55 chr13 65764377 65764559 -54519753 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1086 423 0 0 0 chr13 65764596 65764643 -54519669 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1086 545 282 60 41 chr13 65766499 65766717 -54517595 - LTRIS4 LTR ERV1 0 507 286 4 1086 2097 192 50 13 chr13 65767544 65767997 -54516315 + RLTR1 LTR ERV1 134 624 0 4 1086 396 0 0 0 chr13 65768464 65768508 -54515804 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1086 31878 31 2 8 chr13 65768777 65773561 -54510751 + L1Md_A LINE L1 422 5173 -710 4 1086 310 194 114 3 chr13 65774112 65774220 -54510092 - MTD LTR MaLR 0 421 298 4 1086 9887 104 13 11 chr13 65774226 65775919 -54508393 + L1_Mus2 LINE L1 4304 6010 -556 4 1086 916 122 21 7 chr13 65775919 65776060 -54508252 + B1_Mus1 SINE Alu 1 143 -5 4 1086 6508 68 23 40 chr13 65776060 65776647 -54507665 + L1_Mus2 LINE L1 6011 6566 0 4 1086 5029 221 28 55 chr13 65776670 65778365 -54505947 + L1_Mur3 LINE L1 1965 3612 -2268 4 1086 4345 26 0 0 chr13 65778367 65778860 -54505452 + MT2_Mm LTR ERVL 1 493 0 4 1086 44858 18 9 0 chr13 65778860 65784175 -54500137 + MERVL-int LTR ERVL 1 5360 -125 4 1086 373 179 46 35 chr13 65784175 65784262 -54500050 + ORR1A3-int LTR MaLR 553 640 -1323 4 1086 265 0 27 0 chr13 65784262 65784299 -54500013 + MERVL-int LTR ERVL 5448 5485 0 4 1086 4386 22 0 0 chr13 65784299 65784792 -54499520 + MT2_Mm LTR ERVL 1 493 0 4 1086 1950 226 56 42 chr13 65784792 65785485 -54498827 + L1_Mur3 LINE L1 3610 4312 -1568 4 1086 244 316 46 7 chr13 65785824 65785977 -54498335 - MurSatRep1 Unknown Unknown -88 2049 1891 4 1086 4865 219 111 110 chr13 65786775 65788810 -54495502 - ORR1B1-int LTR MaLR 0 1792 15 4 1086 651 13 0 0 chr13 65788810 65788886 -54495426 + (TC)n Simple_repeat Simple_repeat 1 76 0 4 1086 4865 200 147 102 chr13 65788886 65788931 -54495381 - ORR1B1-int LTR MaLR -1500 463 463 4 1086 1018 105 7 14 chr13 65788931 65789076 -54495236 - B1_Mus2 SINE Alu -1 146 3 4 1086 4865 200 147 102 chr13 65789076 65789444 -54494868 - ORR1B1-int LTR MaLR -1501 462 1 4 1086 1567 234 8 42 chr13 65789444 65789823 -54494489 - ORR1B1 LTR MaLR 0 394 29 4 1086 2313 147 20 25 chr13 65789985 65790389 -54493923 - RLTR9E LTR ERVK 0 409 8 4 1086 264 291 25 8 chr13 65791054 65791172 -54493140 - MMSAT4 Satellite Satellite -6 162 43 4 1086 229 310 69 65 chr13 65791298 65791515 -54492797 - MurSatRep1 Unknown Unknown -88 2049 1832 4 1086 387 280 12 12 chr13 65791408 65791609 -54492703 - MMSAT4 Satellite Satellite -22 201 1 4 1086 523 304 56 42 chr13 65791549 65792020 -54492292 - MurSatRep1 Unknown Unknown 0 2137 1747 4 1086 484 253 15 15 chr13 65791974 65792281 -54492031 - MMSAT4 Satellite Satellite 0 307 1 4 1086 7994 225 71 25 chr13 65792056 65793161 -54491151 - MurSatRep1 Unknown Unknown 0 2137 1335 4 1086 399 41 0 0 chr13 65793161 65793210 -54491102 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1086 192 40 0 0 chr13 65793210 65793234 -54491078 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1086 7994 195 74 18 chr13 65793234 65794488 -54489824 - MurSatRep1 Unknown Unknown -803 1334 2 4 1086 441 358 14 45 chr13 65794584 65794806 -54489506 + B3 SINE B2 2 216 0 4 1086 26 0 0 0 chr13 65795074 65795100 -54489212 + AT_rich Low_complexity Low_complexity 1 26 0 4 1086 804 170 6 0 chr13 65795208 65795367 -54488945 - MurSatRep1 Unknown Unknown -1977 160 1 4 1086 425 200 16 50 chr13 65795416 65795537 -54488775 + Lx4B LINE L1 6336 6452 -606 4 1086 5623 210 33 15 chr13 65795510 65796888 -54487424 + Lx4B LINE L1 5646 7052 -6 4 1086 399 355 70 61 chr13 65796935 65797264 -54487048 - MTD-int LTR MaLR -1219 361 2 4 1086 665 330 90 50 chr13 65797290 65797647 -54486665 - MTD LTR MaLR -16 403 33 4 1087 1243 232 58 54 chr13 65799275 65799739 -54484573 + L1_Mur3 LINE L1 1314 1779 -4101 4 1087 245 310 0 35 chr13 65800552 65800639 -54483673 - MT2A LTR ERVL -376 157 74 4 1087 219 149 39 51 chr13 65800678 65800756 -54483556 + (TTAGGG)n Simple_repeat Simple_repeat 6 82 0 4 1087 212 268 0 27 chr13 65800769 65800842 -54483470 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 4 1087 3497 34 0 0 chr13 65801360 65801770 -54482542 - L1Md_T LINE L1 -1 6581 6172 4 1087 992 131 0 0 chr13 65803177 65803322 -54480990 + B1_Mus2 SINE Alu 1 145 -2 4 1087 432 0 0 0 chr13 65803322 65803370 -54480942 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 4 1087 429 256 81 0 chr13 65803382 65803554 -54480758 + L1_Mur3 LINE L1 906 1091 -6637 4 1087 1138 245 65 58 chr13 65803875 65804394 -54479918 + L1_Mur3 LINE L1 1314 1836 -4044 4 1087 21 0 0 0 chr13 65805368 65805389 -54478923 + AT_rich Low_complexity Low_complexity 1 21 0 4 1087 226 250 16 16 chr13 65805675 65805736 -54478576 - MT2A LTR ERVL -401 132 72 4 1087 224 200 37 55 chr13 65805741 65805905 -54478407 + (TTAGGG)n Simple_repeat Simple_repeat 6 166 0 4 1087 22 88 0 0 chr13 65807008 65807065 -54477247 + AT_rich Low_complexity Low_complexity 1 57 0 4 1087 1422 170 175 35 chr13 65807899 65808271 -54476041 - RLTR33 LTR ERVK -254 424 1 4 1087 649 206 57 0 chr13 65808716 65808857 -54475455 + B1_Mur3 SINE Alu 1 149 0 4 1087 816 159 13 27 chr13 65808959 65809108 -54475204 - B1_Mur3 SINE Alu -2 147 1 4 1087 3516 13 2 0 chr13 65809263 65809658 -54474654 - MTA_Mm LTR MaLR 0 396 1 4 1087 560 346 61 13 chr13 65810087 65810318 -54473994 + B4 SINE B4 5 246 -46 4 1087 628 364 17 34 chr13 65810320 65810616 -54473696 + B4A SINE B4 1 291 -1 4 1087 287 96 0 19 chr13 65810661 65810714 -54473598 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1087 297 259 0 0 chr13 65810726 65810780 -54473532 + B4 SINE B4 229 282 -10 4 1087 401 315 104 55 chr13 65810940 65811249 -54473063 - ORR1E LTR MaLR -17 342 19 4 1087 197 65 0 31 chr13 65812273 65812305 -54472007 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 4 1087 625 205 70 8 chr13 65812305 65812433 -54471879 - B1_Mur2 SINE Alu -13 136 1 4 1087 274 200 21 72 chr13 65812448 65812545 -54471767 - Lx2B LINE L1 -1 6999 6908 4 1087 1286 90 21 0 chr13 65812553 65812741 -54471571 - B2_Mm1t SINE B2 0 193 2 4 1087 1171 220 4 4 chr13 65812916 65813149 -54471163 + MTC LTR MaLR 181 413 -8 4 1087 827 162 27 34 chr13 65813168 65813315 -54470997 - B1_Mur4 SINE Alu 0 150 5 4 1087 321 309 78 35 chr13 65813189 65813330 -54470982 - B4 SINE B4 -69 223 77 4 1087 569 250 0 0 chr13 65813551 65813659 -54470653 + PB1D9 SINE Alu 3 110 -10 4 1087 744 270 66 0 chr13 65813721 65813917 -54470395 + B3 SINE B2 2 210 -6 4 1087 270 116 0 0 chr13 65814005 65814048 -54470264 + (TTGG)n Simple_repeat Simple_repeat 1 43 0 4 1087 792 170 21 7 chr13 65814049 65814191 -54470121 - B1_Mus1 SINE Alu -2 146 3 4 1087 352 352 78 67 chr13 65814294 65814581 -54469731 - MLT1G1 LTR MaLR -235 344 90 4 1087 1199 240 24 57 chr13 65815095 65815431 -54468881 - MT2B LTR ERVL 0 601 277 4 1087 6863 39 34 1 chr13 65815434 65816262 -54468050 + RLTR13A LTR ERVK 1 855 0 4 1087 1058 141 0 11 chr13 65816264 65816450 -54467862 + ETnERV3-int LTR ERVK 3 186 -5622 4 1087 265 286 0 0 chr13 65816522 65816620 -54467692 + ETnERV3-int LTR ERVK 279 376 -6877 4 1087 43135 72 11 12 chr13 65817005 65823326 -54460986 + ETnERV3-int LTR ERVK 186 5797 -11 4 1087 2913 42 58 3 chr13 65823334 65823713 -54460599 + RLTR13A LTR ERVK 1 400 -455 4 1087 245 310 0 35 chr13 65823976 65824063 -54460249 - MT2B LTR ERVL -376 157 74 4 1087 219 149 39 51 chr13 65824102 65824180 -54460132 + (TTAGGG)n Simple_repeat Simple_repeat 6 82 0 4 1087 233 239 0 27 chr13 65824193 65824266 -54460046 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 4 1087 5365 34 0 0 chr13 65824784 65825409 -54458903 - L1Md_T LINE L1 -1 6581 5957 4 1087 311 0 0 25 chr13 65825750 65825790 -54458522 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1087 1470 35 0 0 chr13 65825835 65826008 -54458304 - B2_Mm1t SINE B2 -19 174 2 4 1087 297 248 108 58 chr13 65826635 65826755 -54457557 - B1_Mur1 SINE Alu -1 148 23 4 1087 333 0 0 0 chr13 65826801 65826838 -54457474 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1087 23 86 0 0 chr13 65826886 65826944 -54457368 + AT_rich Low_complexity Low_complexity 1 58 0 4 1087 317 248 43 0 chr13 65826947 65827064 -54457248 + (TG)n Simple_repeat Simple_repeat 1 122 0 4 1087 237 139 0 0 chr13 65827145 65827188 -54457124 + (TATG)n Simple_repeat Simple_repeat 4 46 0 4 1087 182 182 45 0 chr13 65828155 65828199 -54456113 + L3 LINE CR1 2526 2571 -1918 4 1087 535 322 58 20 chr13 65828238 65828631 -54455681 + Lx9 LINE L1 7202 7609 -35 4 1087 26 64 0 0 chr13 65829825 65829872 -54454440 + AT_rich Low_complexity Low_complexity 1 47 0 4 1087 859 166 0 12 chr13 65831351 65831516 -54452796 - Lx2 LINE L1 -67 6930 6768 4 1087 360 95 0 0 chr13 65831522 65831585 -54452727 + Lx2 LINE L1 6935 6997 0 4 1087 25 31 0 0 chr13 65831706 65831738 -54452574 + AT_rich Low_complexity Low_complexity 1 32 0 4 1087 976 128 0 0 chr13 65832702 65832843 -54451469 - B1_Mus1 SINE Alu -5 143 3 4 1087 2062 39 12 4 chr13 65834124 65834381 -54449931 - L1Md_F3 LINE L1 -2 6582 6324 4 1087 34 24 0 0 chr13 65834486 65834527 -54449785 + AT_rich Low_complexity Low_complexity 1 41 0 4 1087 209 255 0 0 chr13 65834527 65834578 -54449734 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1087 23 0 0 0 chr13 65835318 65835341 -54448971 + AT_rich Low_complexity Low_complexity 1 23 0 4 1087 387 157 0 28 chr13 65835497 65835569 -54448743 - ID_B1 SINE B4 -76 148 79 5 1087 408 88 0 0 chr13 65835508 65835565 -54448747 - B1_Mus2 SINE Alu -89 58 2 5 1087 242 219 0 147 chr13 65835565 65835583 -54448729 - MT2B LTR ERVL -386 215 152 5 1087 13073 157 36 11 chr13 65835909 65836638 -54447674 + L1_Mur2 LINE L1 672 1416 -4461 5 1087 1531 27 0 26 chr13 65836638 65836828 -54447484 + B2_Mm1a SINE B2 2 186 -7 5 1087 13073 169 8 49 chr13 65836828 65836927 -54447385 + L1_Mur2 LINE L1 1417 1517 -4360 5 1087 1880 119 112 0 chr13 65836927 65837221 -54447091 + ORR1A2 LTR MaLR 1 327 0 5 1087 13073 169 8 49 chr13 65837221 65837774 -54446538 + L1_Mur2 LINE L1 1518 2060 -3817 5 1087 432 0 0 0 chr13 65837774 65837822 -54446490 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1087 13073 169 8 49 chr13 65837822 65838752 -54445560 + L1_Mur2 LINE L1 2061 2883 -2994 5 1087 402 21 0 0 chr13 65838752 65838799 -54445513 + (GGAA)n Simple_repeat Simple_repeat 2 48 0 5 1087 13073 169 8 49 chr13 65838799 65840051 -54444261 + L1_Mur2 LINE L1 2884 4132 -1745 5 1087 1966 86 23 0 chr13 65840045 65840348 -54443964 - MusHAL1 LINE L1 -733 1979 1670 5 1087 373 288 103 29 chr13 65840348 65840484 -54443828 + B1_Mur3 SINE Alu 4 149 0 5 1087 238 296 0 0 chr13 65840676 65840730 -54443582 + ID4_ SINE ID 30 83 0 5 1087 234 231 29 58 chr13 65840756 65840825 -54443487 + MIRb SINE MIR 19 85 -183 5 1087 27 0 0 0 chr13 65841158 65841185 -54443127 + AT_rich Low_complexity Low_complexity 1 27 0 5 1087 1095 89 7 0 chr13 65841419 65841565 -54442747 + B1_Mm SINE Alu 1 147 0 5 1087 195 0 56 28 chr13 65841565 65841601 -54442711 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 5 1087 245 304 266 23 chr13 65841601 65841729 -54442583 + MIR SINE MIR 29 187 -75 5 1087 2053 190 42 18 chr13 65842778 65843238 -54441074 - RLTR1 LTR ERV1 0 624 132 5 1087 600 287 39 18 chr13 65844066 65844284 -54440028 + LTRIS4 LTR ERV1 286 587 0 5 1087 227 240 55 23 chr13 65846321 65846449 -54437863 + (TG)n Simple_repeat Simple_repeat 2 133 0 5 1087 21 57 0 0 chr13 65846892 65846927 -54437385 + AT_rich Low_complexity Low_complexity 1 35 0 5 1087 258 370 7 62 chr13 65847211 65847355 -54436957 + B3 SINE B2 7 142 -74 5 1087 1203 28 0 0 chr13 65847408 65847551 -54436761 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 5 1087 257 254 0 0 chr13 65847688 65847743 -54436569 + RLTR22_Mur LTR ERVK 2 56 -1792 5 1087 1558 176 6 55 chr13 65848633 65848976 -54435336 + ORR1A3-int LTR MaLR 1189 1514 -449 5 1087 1361 124 13 4 chr13 65848985 65849211 -54435101 - RMER16-int LTR ERVK -3417 1989 1762 5 1087 1710 166 18 6 chr13 65849211 65849539 -54434773 + Lx2B LINE L1 6039 6370 -630 5 1087 1757 156 78 18 chr13 65849535 65849920 -54434392 + Lx2B LINE L1 6588 6995 -5 5 1087 182 116 0 23 chr13 65850995 65851039 -54433273 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 5 1087 570 219 0 0 chr13 65851042 65851165 -54433147 - Lx7 LINE L1 -338 7358 7236 5 1087 1468 244 33 14 chr13 65851446 65851870 -54432442 - Lx7 LINE L1 -520 7176 6745 5 1087 239 248 18 27 chr13 65851917 65852029 -54432283 + Lx9 LINE L1 7486 7596 -48 5 1087 21 0 0 0 chr13 65852074 65852095 -54432217 + AT_rich Low_complexity Low_complexity 1 21 0 5 1087 3373 100 49 2 chr13 65852775 65853305 -54431007 + L1_Mus2 LINE L1 4297 4851 -1032 5 1087 6750 83 9 28 chr13 65853304 65853847 -54430465 + L1_Mus2 LINE L1 5458 6010 -556 5 1087 999 93 7 7 chr13 65853847 65853988 -54430324 + B1_Mus1 SINE Alu 1 141 -7 5 1087 6750 72 5 37 chr13 65853988 65854577 -54429735 + L1_Mus2 LINE L1 6011 6564 -2 5 1087 6853 219 45 48 chr13 65854598 65856940 -54427372 + L1_Mur3 LINE L1 1965 4298 -1582 5 1087 229 185 0 0 chr13 65857386 65857440 -54426872 - MMSAT4 Satellite Satellite -4 164 111 5 1087 4941 201 55 142 chr13 65858270 65858906 -54425406 - ORR1B1-int LTR MaLR 0 1963 1757 5 1087 953 119 27 20 chr13 65858906 65859052 -54425260 - B1_Mus1 SINE Alu -1 147 1 5 1087 4941 198 106 197 chr13 65859052 65860395 -54423917 - ORR1B1-int LTR MaLR -207 1756 472 5 1087 933 107 0 0 chr13 65860395 65860535 -54423777 + (TCCCC)n Simple_repeat Simple_repeat 3 142 0 5 1087 4941 198 106 197 chr13 65860535 65860744 -54423568 - ORR1B1-int LTR MaLR -1492 471 410 5 1087 1105 102 0 0 chr13 65860744 65860891 -54423421 - B1_Mus2 SINE Alu 0 147 1 5 1087 4941 198 106 197 chr13 65860891 65861207 -54423105 - ORR1B1-int LTR MaLR -1554 409 1 5 1087 1552 221 7 34 chr13 65861208 65861580 -54422732 - ORR1B1 LTR MaLR -1 393 1 5 1087 2300 158 20 17 chr13 65861748 65862155 -54422157 - RLTR9E LTR ERVK 0 409 2 5 1087 258 274 30 17 chr13 65862730 65862930 -54421382 - MMSAT4 Satellite Satellite -7 202 1 5 1087 273 284 8 8 chr13 65863168 65863285 -54421027 - MMSAT4 Satellite Satellite -22 146 30 5 1087 423 328 33 33 chr13 65863225 65863528 -54420784 - MurSatRep1 Unknown Unknown -88 2049 1747 5 1087 503 256 25 24 chr13 65863398 65864151 -54420161 - MMSAT4 Satellite Satellite 0 1056 24 5 1087 343 303 73 45 chr13 65864151 65864438 -54419874 - MurSatRep1 Unknown Unknown 0 2137 1843 5 1087 8409 226 44 17 chr13 65864316 65865273 -54419039 - MurSatRep1 Unknown Unknown 0 2137 1346 5 1087 503 256 25 24 chr13 65864438 65864453 -54419859 - MMSAT4 Satellite Satellite 0 23 1 5 1087 378 0 0 0 chr13 65865273 65865315 -54418997 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1087 8409 203 47 15 chr13 65865315 65866600 -54417712 - MurSatRep1 Unknown Unknown -792 1345 2 5 1087 330 392 10 0 chr13 65866696 65866890 -54417422 + B3 SINE B2 2 197 -19 5 1087 853 169 0 0 chr13 65867315 65867475 -54416837 - MurSatRep1 Unknown Unknown -1977 160 1 5 1087 5643 215 28 15 chr13 65867524 65868997 -54415315 + Lx4B LINE L1 5644 7052 -6 5 1087 555 336 46 40 chr13 65869045 65869373 -54414939 - MTD-int LTR MaLR -1039 331 2 5 1087 685 323 85 56 chr13 65869399 65869740 -54414572 - MTD LTR MaLR -16 403 53 5 1087 21 0 0 0 chr13 65871570 65871591 -54412721 + AT_rich Low_complexity Low_complexity 1 21 0 5 1087 1520 236 15 17 chr13 65871795 65872204 -54412108 + Lx7 LINE L1 6745 7152 -544 5 1087 533 228 0 0 chr13 65872510 65872633 -54411679 + Lx7 LINE L1 7236 7358 -338 5 1087 227 104 0 59 chr13 65872636 65872687 -54411625 + T-rich Low_complexity Low_complexity 2 49 0 5 1087 36510 39 0 3 chr13 65872732 65878974 -54405338 - L1Md_T LINE L1 -2 6583 262 5 1087 26 0 0 0 chr13 65879101 65879127 -54405185 + AT_rich Low_complexity Low_complexity 1 26 0 5 1087 2034 130 78 11 chr13 65880010 65880382 -54403930 - Lx2B LINE L1 -5 6995 6599 5 1087 253 122 0 0 chr13 65880392 65880433 -54403879 - Lx2B LINE L1 -630 6370 6330 5 1087 4112 75 0 0 chr13 65880433 65880965 -54403347 + L1Md_T LINE L1 6051 6582 0 5 1087 967 114 19 0 chr13 65880966 65881124 -54403188 + RMER16-int LTR ERVK 1829 1989 -3417 5 1087 1507 176 9 56 chr13 65881133 65881475 -54402837 - ORR1A3-int LTR MaLR -449 1514 1189 5 1087 525 236 23 147 chr13 65882553 65882771 -54401541 - B2_Mm2 SINE B2 0 195 5 5 1087 21 57 0 0 chr13 65883052 65883087 -54401225 + AT_rich Low_complexity Low_complexity 1 35 0 5 1087 297 102 64 18 chr13 65883586 65883696 -54400616 + (CA)n Simple_repeat Simple_repeat 1 115 0 5 1087 270 199 50 60 chr13 65883707 65883889 -54400423 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1087 333 0 0 0 chr13 65883926 65883963 -54400349 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1087 545 282 60 41 chr13 65885820 65886038 -54398274 - LTRIS4 LTR ERV1 0 507 286 5 1087 2104 190 50 13 chr13 65886866 65887319 -54396993 + RLTR1 LTR ERV1 134 624 0 5 1087 480 35 0 0 chr13 65887780 65887838 -54396474 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1087 31608 28 2 8 chr13 65888106 65892689 -54391623 + L1Md_A LINE L1 631 5173 -710 5 1087 289 258 87 16 chr13 65893240 65893390 -54390922 - MTD LTR MaLR 0 421 264 5 1087 9674 103 14 10 chr13 65893390 65895047 -54389265 + L1_Mus2 LINE L1 4340 6010 -556 5 1087 888 154 0 7 chr13 65895047 65895191 -54389121 + B1_Mus1 SINE Alu 1 143 -5 5 1087 6530 68 23 38 chr13 65895191 65895776 -54388536 + L1_Mus2 LINE L1 6011 6566 0 5 1087 6924 221 36 55 chr13 65895799 65897498 -54386814 + L1_Mur3 LINE L1 1965 3612 -2268 5 1087 4401 20 0 0 chr13 65897498 65897991 -54386321 + MT2_Mm LTR ERVL 1 493 0 5 1087 6924 221 36 55 chr13 65897991 65898684 -54385628 + L1_Mur3 LINE L1 3613 4312 -1568 5 1087 244 316 46 7 chr13 65899022 65899175 -54385137 - MurSatRep1 Unknown Unknown -88 2049 1891 5 1087 2831 254 93 122 chr13 65899973 65902143 -54382169 - ORR1B1-int LTR MaLR 0 1963 15 5 1087 1049 93 0 14 chr13 65902143 65902285 -54382027 - B1_Mus2 SINE Alu -5 142 3 5 1087 2831 252 125 132 chr13 65902285 65902653 -54381659 - ORR1B1-int LTR MaLR -1512 451 1 5 1087 1578 226 8 42 chr13 65902653 65903032 -54381280 - ORR1B1 LTR MaLR 0 394 29 5 1087 2301 145 20 25 chr13 65903194 65903598 -54380714 - RLTR9E LTR ERVK 0 409 8 5 1087 249 284 30 17 chr13 65904181 65904381 -54379931 - MMSAT4 Satellite Satellite -7 202 1 5 1087 558 297 59 43 chr13 65904622 65905061 -54379251 - MurSatRep1 Unknown Unknown 0 2137 1747 5 1087 421 257 22 22 chr13 65905015 65905154 -54379158 - MMSAT4 Satellite Satellite 0 168 30 5 1087 496 316 55 36 chr13 65905097 65905183 -54379129 - MurSatRep1 Unknown Unknown 0 2137 2002 5 1087 498 234 14 14 chr13 65905183 65905322 -54378990 - MMSAT4 Satellite Satellite 0 168 30 5 1087 496 316 55 36 chr13 65905322 65905481 -54378831 - MurSatRep1 Unknown Unknown 0 2001 1747 5 1087 505 258 17 17 chr13 65905351 65905937 -54378375 - MMSAT4 Satellite Satellite 0 888 26 5 1087 397 300 63 35 chr13 65905937 65906224 -54378088 - MurSatRep1 Unknown Unknown 0 2137 1843 5 1087 8113 214 60 25 chr13 65906102 65907046 -54377266 - MurSatRep1 Unknown Unknown 0 2137 1351 5 1087 505 258 17 17 chr13 65906224 65906239 -54378073 - MMSAT4 Satellite Satellite 0 25 1 5 1087 351 0 0 0 chr13 65907046 65907085 -54377227 + (TA)n Simple_repeat Simple_repeat 1 39 0 5 1087 8113 196 64 21 chr13 65907085 65908361 -54375951 - MurSatRep1 Unknown Unknown -787 1350 1 5 1087 441 358 14 45 chr13 65908457 65908679 -54375633 + B3 SINE B2 2 216 0 5 1087 26 0 0 0 chr13 65908947 65908973 -54375339 + AT_rich Low_complexity Low_complexity 1 26 0 5 1087 826 164 6 0 chr13 65909081 65909240 -54375072 - MurSatRep1 Unknown Unknown -1977 160 1 5 1087 425 200 16 50 chr13 65909289 65909410 -54374902 + Lx4B LINE L1 6336 6452 -606 5 1087 5660 209 33 15 chr13 65909383 65910761 -54373551 + Lx4B LINE L1 5646 7052 -6 5 1087 421 352 70 61 chr13 65910808 65911137 -54373175 - MTD-int LTR MaLR -1219 361 2 5 1087 607 339 90 50 chr13 65911163 65911520 -54372792 - MTD LTR MaLR -16 403 33 5 1087 1225 235 58 54 chr13 65913148 65913612 -54370700 + L1_Mur3 LINE L1 1314 1779 -4101 5 1087 262 298 0 35 chr13 65914426 65914513 -54369799 - MT2A LTR ERVL -376 157 74 5 1087 240 135 39 51 chr13 65914552 65914630 -54369682 + (TTAGGG)n Simple_repeat Simple_repeat 6 82 0 5 1087 204 214 14 41 chr13 65914643 65914716 -54369596 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 5 1087 3401 42 0 0 chr13 65915235 65915644 -54368668 - L1Md_T LINE L1 -2 6580 6172 5 1087 1017 117 0 0 chr13 65917051 65917196 -54367116 + B1_Mus2 SINE Alu 1 145 -2 5 1087 504 0 0 0 chr13 65917196 65917252 -54367060 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 5 1087 439 250 81 0 chr13 65917264 65917436 -54366876 + L1_Mur3 LINE L1 906 1091 -6637 5 1087 205 245 19 47 chr13 65917525 65917632 -54366680 + (CAGAGA)n Simple_repeat Simple_repeat 4 107 0 5 1087 1180 243 65 58 chr13 65917758 65918277 -54366035 + L1_Mur3 LINE L1 1314 1836 -4044 5 1087 21 0 0 0 chr13 65919252 65919273 -54365039 + AT_rich Low_complexity Low_complexity 1 21 0 5 1087 340 345 25 67 chr13 65919348 65919587 -54364725 - MT2A LTR ERVL -231 302 74 5 1087 219 149 39 51 chr13 65919626 65919704 -54364608 + (TTAGGG)n Simple_repeat Simple_repeat 6 82 0 5 1087 228 254 0 27 chr13 65919717 65919790 -54364522 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 5 1087 22 88 0 0 chr13 65920893 65920950 -54363362 + AT_rich Low_complexity Low_complexity 1 57 0 6 1087 1421 170 175 35 chr13 65921784 65922156 -54362156 - RLTR33 LTR ERVK -254 424 1 6 1087 649 206 57 0 chr13 65922601 65922742 -54361570 + B1_Mur3 SINE Alu 1 149 0 6 1087 819 141 14 40 chr13 65922844 65922992 -54361320 - B1_Mur3 SINE Alu -5 144 1 6 1087 3516 13 2 0 chr13 65923147 65923542 -54360770 - MTA_Mm LTR MaLR 0 396 1 6 1087 549 351 61 13 chr13 65923974 65924205 -54360107 + B4 SINE B4 5 246 -46 6 1087 437 349 18 35 chr13 65924207 65924492 -54359820 + B4A SINE B4 1 280 -12 6 1087 431 87 0 14 chr13 65924537 65924607 -54359705 + (CA)n Simple_repeat Simple_repeat 2 70 0 6 1087 297 259 0 0 chr13 65924619 65924673 -54359639 + B4 SINE B4 229 282 -10 6 1087 381 339 89 38 chr13 65924849 65925162 -54359150 - ORR1E LTR MaLR -17 342 14 6 1087 423 68 0 0 chr13 65925701 65925760 -54358552 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1087 197 65 0 31 chr13 65926238 65926270 -54358042 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 6 1087 611 213 70 8 chr13 65926270 65926398 -54357914 - B1_Mur2 SINE Alu -13 136 1 6 1087 304 182 19 67 chr13 65926413 65926525 -54357787 - Lx2B LINE L1 -1 6999 6897 6 1087 978 171 34 135 chr13 65926526 65926763 -54357549 - MT2A LTR ERVL -315 218 6 6 1087 246 125 0 0 chr13 65926760 65926800 -54357512 + ID_B1 SINE B4 184 223 -1 6 1087 592 280 0 17 chr13 65926824 65926944 -54357368 + RSINE1 SINE B4 18 135 -30 6 1087 207 0 0 0 chr13 65926949 65926972 -54357340 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 6 1087 731 237 19 67 chr13 65927152 65927360 -54356952 + B3A SINE B2 1 198 0 6 1087 388 250 216 0 chr13 65927382 65927498 -54356814 + B1_Mur2 SINE Alu 3 143 -6 6 1087 215 214 87 10 chr13 65927513 65927617 -54356695 + GA-rich Low_complexity Low_complexity 3 114 0 6 1087 2534 186 44 14 chr13 65927657 65928154 -54356158 + RLTR11A2 LTR ERVK 1 512 -15 6 1087 246 256 37 49 chr13 65928216 65928298 -54356014 - Charlie1b DNA MER1_type -339 184 104 6 1087 2674 78 143 139 chr13 65928315 65928825 -54355487 - RLTR1B LTR ERV1 0 512 1 6 1087 994 167 136 0 chr13 65928853 65929051 -54355261 - URR1A DNA MER1_type -1 225 1 6 1087 364 188 0 0 chr13 65929051 65929115 -54355197 + RLTR18B LTR ERVK 38 101 -411 6 135 2149 173 69 74 chr13 65929119 65929254 -54355058 - RLTR18-int LTR ERVK -850 4511 4370 6 1088 687 187 265 0 chr13 65929254 65929420 -54354892 + B3 SINE B2 2 211 -5 6 1088 2149 174 159 45 chr13 65929420 65930191 -54354121 - RLTR18-int LTR ERVK -992 4369 3518 6 1088 881 137 20 0 chr13 65930191 65930337 -54353975 + B1_Mur4 SINE Alu 1 149 -1 6 1088 1224 77 0 17 chr13 65930348 65930520 -54353792 + B2_Mm2 SINE B2 2 170 -25 6 1088 3002 180 28 24 chr13 65930558 65931195 -54353117 - RLTR18-int LTR ERVK -1830 3531 2892 6 1088 780 50 0 0 chr13 65931195 65931294 -54353018 - MTB LTR MaLR -4 322 224 6 1088 1019 92 6 38 chr13 65931698 65931734 -54352578 - MTB LTR MaLR -247 153 122 6 1088 2327 127 14 36 chr13 65931734 65932152 -54352160 + RLTR9E LTR ERVK 1 409 0 6 1088 1019 92 6 38 chr13 65932152 65932273 -54352039 - MTB LTR MaLR -279 121 1 6 1088 768 77 0 0 chr13 65932305 65932409 -54351903 + (TA)n Simple_repeat Simple_repeat 1 104 0 6 1088 370 226 72 41 chr13 65932464 65932561 -54351751 - PB1D10 SINE Alu -5 112 13 6 1088 257 275 0 91 chr13 65932482 65932570 -54351742 - B4A SINE B4 -124 168 89 6 1088 1055 101 0 6 chr13 65932610 65932770 -54351542 + (TTC)n Simple_repeat Simple_repeat 1 159 0 6 1088 223 240 10 10 chr13 65932776 65932814 -54351498 + polypyrimidine Low_complexity Low_complexity 61 98 0 6 1088 1227 48 0 0 chr13 65932814 65932961 -54351351 - B1_Mus2 SINE Alu 0 147 1 6 1088 223 240 10 10 chr13 65932961 65933019 -54351293 + CT-rich Low_complexity Low_complexity 3 60 0 6 1088 189 0 0 0 chr13 65933092 65933113 -54351199 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1088 4269 92 24 5 chr13 65933147 65933767 -54350545 + L1_Mus4 LINE L1 6005 6636 0 6 1088 645 356 80 18 chr13 65934509 65934846 -54349466 - RMER15 LTR ERVL 0 575 218 6 1088 736 170 4 0 chr13 65935303 65935463 -54348849 - MMSAT4 Satellite Satellite -25 160 1 6 1088 30048 25 3 0 chr13 65935463 65939201 -54345111 + L1Md_T LINE L1 1838 5586 -297 6 1088 8526 32 0 0 chr13 65939201 65940197 -54344115 + L1Md_T LINE L1 5587 6582 0 6 1088 845 187 60 10 chr13 65940198 65940398 -54343914 + MurSatRep1 Unknown Unknown 1927 2136 -1 6 1088 309 277 23 19 chr13 65940433 65940643 -54343669 + MMSAT4 Satellite Satellite 1 210 0 6 1088 347 259 72 51 chr13 65940691 65940886 -54343426 + MurSatRep1 Unknown Unknown 1755 1953 -184 6 1088 299 301 8 8 chr13 65940949 65941073 -54343239 + MMSAT4 Satellite Satellite 44 167 -1 6 1088 237 341 0 0 chr13 65941112 65941238 -54343074 + MMSAT4 Satellite Satellite 43 168 0 6 1088 349 257 16 84 chr13 65942250 65942371 -54341941 + B4 SINE B4 90 217 -75 6 1088 27 0 0 0 chr13 65942456 65942483 -54341829 + AT_rich Low_complexity Low_complexity 1 27 0 6 1088 208 102 20 20 chr13 65942885 65942935 -54341377 + (CCCCCA)n Simple_repeat Simple_repeat 1 50 0 6 1088 593 275 43 52 chr13 65943530 65943760 -54340552 + LTRIS4 LTR ERV1 280 507 0 6 1088 4503 104 5 2 chr13 65944488 65945073 -54339239 + LTRIS_Mus LTR ERV1 1 587 0 6 1088 227 31 31 0 chr13 65946428 65946460 -54337852 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 1088 206 241 67 18 chr13 65946474 65946639 -54337673 + (TG)n Simple_repeat Simple_repeat 1 173 0 6 1088 255 276 63 98 chr13 65946660 65946865 -54337447 + RLTR25A LTR ERVK 897 1094 -9 6 1088 24 53 0 0 chr13 65947026 65947064 -54337248 + AT_rich Low_complexity Low_complexity 1 38 0 6 1088 4258 99 40 29 chr13 65947139 65947764 -54336548 - L1_Mus4 LINE L1 0 6636 6005 6 1088 234 214 116 7 chr13 65947814 65947960 -54336352 - RMER17C LTR ERVK -137 273 112 6 1088 1010 88 0 7 chr13 65947969 65948117 -54336195 + (GAA)n Simple_repeat Simple_repeat 1 147 0 6 1088 242 284 23 69 chr13 65948167 65948254 -54336058 + B4A SINE B4 89 171 -121 6 1088 343 247 72 41 chr13 65948176 65948273 -54336039 + PB1D10 SINE Alu 13 112 -5 6 1088 1013 99 6 38 chr13 65948388 65948509 -54335803 + MTB LTR MaLR 1 121 -279 6 1088 2489 138 9 36 chr13 65948509 65948929 -54335383 - RLTR9E LTR ERVK 0 409 1 6 1088 1013 99 6 38 chr13 65948929 65948965 -54335347 + MTB LTR MaLR 122 153 -247 6 1088 778 50 0 0 chr13 65949369 65949468 -54334844 + MTB LTR MaLR 224 322 -4 6 1088 1730 167 7 0 chr13 65949486 65949762 -54334550 - RLTR27 LTR ERVK 0 309 32 6 1088 2088 73 4 0 chr13 65949763 65950038 -54334274 - RLTR10A LTR ERVK -135 276 1 6 1088 2887 199 29 26 chr13 65950040 65950664 -54333648 + RLTR18-int LTR ERVK 2906 3531 -1830 6 1088 1285 71 0 12 chr13 65950701 65950872 -54333440 - B2_Mm2 SINE B2 -25 170 2 6 1088 890 149 21 0 chr13 65950888 65951029 -54333283 - B1_Mur4 SINE Alu -6 144 1 6 1088 2525 169 160 47 chr13 65951029 65951801 -54332511 + RLTR18-int LTR ERVK 3518 4369 -992 6 1088 758 187 265 0 chr13 65951801 65951967 -54332345 - B3 SINE B2 -5 211 2 6 1088 2525 163 71 78 chr13 65951967 65952102 -54332210 + RLTR18-int LTR ERVK 4370 4511 -850 6 1088 373 156 0 15 chr13 65952106 65952171 -54332141 - RLTR18B LTR ERVK -411 101 38 6 1088 1112 166 131 0 chr13 65952171 65952370 -54331942 + URR1A DNA MER1_type 1 225 -1 6 1088 2349 188 77 6 chr13 65952552 65953033 -54331279 - RLTR11A2 LTR ERVK -12 515 1 6 1088 325 299 0 22 chr13 65953070 65953159 -54331153 + C-rich Low_complexity Low_complexity 6 92 0 6 1088 467 231 207 0 chr13 65953164 65953285 -54331027 - B1_Mur2 SINE Alu -1 148 3 6 1088 785 243 21 48 chr13 65953329 65953515 -54330797 - B3A SINE B2 -17 181 1 6 1088 540 314 0 17 chr13 65953708 65953828 -54330484 - RSINE1 SINE B4 -30 135 18 6 1088 240 150 0 0 chr13 65953852 65953892 -54330420 - ID_B1 SINE B4 -1 223 184 6 1088 1241 198 65 90 chr13 65953889 65954365 -54329947 + MT2A LTR ERVL 6 601 0 6 1088 195 430 0 0 chr13 65954483 65954583 -54329729 - L2a LINE L2 -281 3145 3046 6 1088 361 367 126 15 chr13 65954831 65955148 -54329164 + MLT1G1 LTR MaLR 1 401 -178 6 1088 934 154 21 7 chr13 65955261 65955405 -54328907 + B1_Mus1 SINE Alu 1 146 -2 6 1088 204 125 0 0 chr13 65955405 65955437 -54328875 + (CCAA)n Simple_repeat Simple_repeat 4 35 0 6 1088 826 272 64 0 chr13 65955519 65955721 -54328591 - B3 SINE B2 0 216 2 6 1088 641 212 0 0 chr13 65955792 65955891 -54328421 - PB1D9 SINE Alu -19 101 3 6 1088 334 297 144 0 chr13 65955983 65956094 -54328218 + RSINE1 SINE B4 6 132 -33 6 1088 326 296 77 56 chr13 65956111 65956254 -54328058 + B4 SINE B4 77 222 -70 6 1088 828 162 27 34 chr13 65956126 65956273 -54328039 + B1_Mur4 SINE Alu 5 150 0 6 1088 1071 215 17 13 chr13 65956292 65956523 -54327789 - MTC LTR MaLR -8 413 182 6 1088 3687 18 5 0 chr13 65956619 65957013 -54327299 + MTA_Mm LTR MaLR 1 396 0 6 1088 1384 96 11 0 chr13 65957098 65957286 -54327026 + B2_Mm1t SINE B2 2 191 -2 6 1088 324 194 28 0 chr13 65957292 65957364 -54326948 + Lx2 LINE L1 6909 6982 -15 6 1088 634 206 79 8 chr13 65957403 65957530 -54326782 + B1_Mur2 SINE Alu 1 136 -13 6 1088 218 32 0 31 chr13 65957530 65957562 -54326750 + (CCAA)n Simple_repeat Simple_repeat 4 34 0 6 1088 391 333 87 39 chr13 65958603 65958912 -54325400 + ORR1E LTR MaLR 19 342 -17 6 1088 295 259 0 0 chr13 65959072 65959126 -54325186 - B4 SINE B4 -10 282 229 6 1088 500 101 0 11 chr13 65959138 65959228 -54325084 + (TG)n Simple_repeat Simple_repeat 2 90 0 6 1088 399 388 21 26 chr13 65959262 65959495 -54324817 - B4A SINE B4 -1 291 60 6 1088 1341 222 33 86 chr13 65959508 65959851 -54324461 - L1_Mur3 LINE L1 -3486 2394 2058 6 1088 192 40 0 0 chr13 65959851 65959876 -54324436 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 1088 1341 222 33 86 chr13 65959876 65959986 -54324326 - L1_Mur3 LINE L1 -3823 2057 1965 6 1088 4305 81 2 41 chr13 65960006 65960589 -54323723 - L1_Mus2 LINE L1 -3 6563 6004 6 1088 486 0 0 0 chr13 65960593 65960647 -54323665 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 6 1088 1300 56 0 0 chr13 65960647 65960807 -54323505 - B2_Mm1t SINE B2 -33 160 1 7 1088 1089 76 28 7 chr13 65960818 65960963 -54323349 - B1_Mus1 SINE Alu 0 148 1 7 1088 3334 67 9 2 chr13 65960963 65961513 -54322799 - L1_Mus2 LINE L1 -556 6010 5458 6 1088 3912 93 3 14 chr13 65961512 65962081 -54322231 - L1_Mus2 LINE L1 -1032 4851 4289 6 1088 260 267 46 20 chr13 65962777 65962930 -54321382 - Lx9 LINE L1 -2 7642 7486 7 1088 1542 255 23 20 chr13 65962966 65963407 -54320905 + Lx7 LINE L1 6735 7176 -520 7 1088 618 266 6 11 chr13 65963688 65963867 -54320445 + Lx7 LINE L1 7236 7413 -283 7 1088 183 129 0 0 chr13 65964035 65964066 -54320246 + (TAA)n Simple_repeat Simple_repeat 1 31 0 7 1088 2061 145 84 11 chr13 65964907 65965277 -54319035 - Lx2B LINE L1 -5 6995 6599 7 1088 1791 164 15 41 chr13 65965285 65965324 -54318988 - Lx2B LINE L1 -628 6372 6338 7 1088 3666 0 0 0 chr13 65965324 65965706 -54318606 + L1Md_A LINE L1 6201 6582 0 7 1088 1791 164 15 41 chr13 65965706 65966009 -54318303 - Lx2B LINE L1 -663 6337 6039 7 1088 1508 120 13 4 chr13 65966009 65966235 -54318077 + RMER16-int LTR ERVK 1762 1989 -3417 7 1088 1503 181 15 50 chr13 65966244 65966582 -54317730 - ORR1A3-int LTR MaLR -449 1514 1189 7 1088 249 254 0 0 chr13 65967456 65967511 -54316801 - RLTR22_Mur LTR ERVK -1792 56 2 7 1088 521 245 23 144 chr13 65967678 65967893 -54316419 - B2_Mm2 SINE B2 0 195 7 7 1088 207 218 67 15 chr13 65968662 65968797 -54315515 + (CA)n Simple_repeat Simple_repeat 1 142 0 7 1088 465 102 46 9 chr13 65968822 65968931 -54315381 + (CA)n Simple_repeat Simple_repeat 1 113 0 7 1088 5637 71 6 21 chr13 65969083 65969576 -54314736 + L1_Mus2 LINE L1 5515 6007 -559 7 1088 1087 90 20 7 chr13 65969576 65969722 -54314590 + B1_Mus1 SINE Alu 1 148 0 7 1088 5637 64 5 24 chr13 65969722 65970055 -54314257 + L1_Mus2 LINE L1 6008 6327 -239 7 1088 1052 108 0 28 chr13 65970130 65970387 -54313925 + (TTTC)n Simple_repeat Simple_repeat 1 249 0 7 1088 375 261 108 0 chr13 65970395 65970525 -54313787 - B1_Mm SINE Alu 0 147 4 7 1088 2200 73 23 0 chr13 65970525 65970828 -54313484 + MusHAL1 LINE L1 1670 1979 -733 7 1088 14688 157 32 30 chr13 65970822 65971055 -54313257 - L1_Mur2 LINE L1 -1744 4133 3930 7 1088 1398 77 11 11 chr13 65971055 65971239 -54313073 - B2_Mm1t SINE B2 -9 184 1 7 1088 14688 157 32 30 chr13 65971239 65972276 -54312036 - L1_Mur2 LINE L1 -1948 3929 2885 7 1088 360 0 0 0 chr13 65972276 65972316 -54311996 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 7 1088 1079 129 0 6 chr13 65972318 65972497 -54311815 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 7 1088 14688 157 32 30 chr13 65972497 65973838 -54310474 - L1_Mur2 LINE L1 -2993 2884 1522 7 1088 2011 122 112 0 chr13 65973838 65974132 -54310180 - ORR1A2 LTR MaLR 0 327 1 7 1088 14688 159 24 18 chr13 65974132 65974647 -54309665 - L1_Mur2 LINE L1 -4356 1521 992 7 1088 225 0 0 0 chr13 65974647 65974672 -54309640 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 1088 224 200 0 16 chr13 65975710 65975771 -54308541 + GA-rich Low_complexity Low_complexity 2 61 0 7 1088 182 146 0 40 chr13 65976089 65976139 -54308173 + T-rich Low_complexity Low_complexity 2 49 0 7 1088 242 87 22 0 chr13 65978028 65978074 -54306238 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 7 1088 1208 55 14 7 chr13 65978083 65978229 -54306083 - B1_Mus2 SINE Alu 0 147 1 7 1088 23 0 0 0 chr13 65979075 65979098 -54305214 + AT_rich Low_complexity Low_complexity 1 23 0 7 1088 241 176 20 0 chr13 65979839 65979890 -54304422 + (CA)n Simple_repeat Simple_repeat 2 53 0 7 1088 30 45 0 0 chr13 65979891 65979935 -54304377 + AT_rich Low_complexity Low_complexity 1 44 0 7 1088 1224 61 7 0 chr13 65981295 65981442 -54302870 + B1_Mus1 SINE Alu 1 148 0 7 1088 32230 73 5 3 chr13 65981687 65986631 -54297681 - L1Md_F2 LINE L1 0 6582 1635 7 1088 1386 87 40 0 chr13 65986655 65986828 -54297484 + B2_Mm2 SINE B2 1 180 -15 7 1088 231 36 0 0 chr13 65986831 65986859 -54297453 + (CAA)n Simple_repeat Simple_repeat 2 29 0 7 1088 37 23 0 0 chr13 65987616 65987660 -54296652 + AT_rich Low_complexity Low_complexity 1 44 0 7 1088 365 113 0 0 chr13 65987787 65987849 -54296463 - Lx2 LINE L1 -1 6996 6935 7 1088 851 178 0 12 chr13 65987855 65988020 -54296292 + Lx2 LINE L1 6768 6930 -67 7 1088 26 64 0 0 chr13 65989510 65989557 -54294755 + AT_rich Low_complexity Low_complexity 1 47 0 7 1088 642 318 65 27 chr13 65990749 65991150 -54293162 - Lx9 LINE L1 -27 7617 7202 7 1088 182 182 45 0 chr13 65991189 65991233 -54293079 - L3 LINE CR1 -1918 2571 2526 7 1088 255 157 0 0 chr13 65992196 65992247 -54292065 + (CATA)n Simple_repeat Simple_repeat 4 54 0 7 1088 335 244 42 0 chr13 65992326 65992445 -54291867 + (CA)n Simple_repeat Simple_repeat 1 124 0 7 1088 21 71 0 0 chr13 65992448 65992490 -54291822 + AT_rich Low_complexity Low_complexity 1 42 0 7 1088 291 28 0 0 chr13 65992555 65992591 -54291721 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1088 295 266 108 58 chr13 65992635 65992755 -54291557 + B1_Mur1 SINE Alu 23 148 -1 7 1088 1571 163 167 36 chr13 65993035 65993424 -54290888 + RLTR33 LTR ERVK 1 440 -238 7 1088 24 0 0 0 chr13 65993895 65993919 -54290393 + AT_rich Low_complexity Low_complexity 1 24 0 7 1088 241 306 61 10 chr13 65994417 65994516 -54289796 - B1_Mus1 SINE Alu -36 112 9 7 1088 207 0 0 0 chr13 65994770 65994793 -54289519 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1088 21 0 0 0 chr13 65995901 65995922 -54288390 + AT_rich Low_complexity Low_complexity 1 21 0 7 1088 29 84 0 0 chr13 65995991 65996062 -54288250 + AT_rich Low_complexity Low_complexity 1 71 0 7 1088 1487 57 0 17 chr13 65996695 65996854 -54287458 + B2_Mm1t SINE B2 2 160 -33 7 1088 315 0 0 0 chr13 65996854 65996889 -54287423 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 7 1088 1487 57 0 17 chr13 65996889 65996907 -54287405 + B2_Mm1t SINE B2 161 176 -17 7 1088 269 299 30 30 chr13 65996931 65997031 -54287281 - RLTR42-int LTR ERVK -3729 1793 1694 7 1088 244 254 0 27 chr13 65997373 65997446 -54286866 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 7 1088 192 155 0 90 chr13 65997459 65997537 -54286775 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 7 1088 249 301 0 35 chr13 65997577 65997663 -54286649 + MT2A LTR ERVL 75 157 -376 7 1088 1229 257 53 72 chr13 65998428 65998694 -54285618 - L1_Mur3 LINE L1 -4044 1836 1596 7 1088 1430 95 5 16 chr13 65998694 65998887 -54285425 - B2_Mm1t SINE B2 -1 192 2 7 1088 1229 257 53 72 chr13 65998887 65999148 -54285164 - L1_Mur3 LINE L1 -4285 1595 1319 7 1088 455 248 89 6 chr13 65999484 65999642 -54284670 - L1_Mur3 LINE L1 -6637 1091 921 7 1088 1061 105 28 0 chr13 65999682 65999825 -54284487 - B1_Mus2 SINE Alu 0 147 1 7 1088 490 381 30 16 chr13 66002049 66002379 -54281933 + MTE-int LTR MaLR 2 361 -1219 1 1088 5553 209 35 17 chr13 66002426 66003810 -54280502 - Lx4B LINE L1 -6 7052 5644 2 1088 360 216 24 12 chr13 66003780 66003896 -54280416 - Lx4B LINE L1 -610 6448 6335 2 1088 843 170 0 0 chr13 66003946 66004105 -54280207 + MurSatRep1 Unknown Unknown 2 160 -1977 3 1088 210 213 21 0 chr13 66004242 66004289 -54280023 - B1_Mus2 SINE Alu 0 147 100 4 1088 394 384 19 23 chr13 66004507 66004723 -54279589 - B3 SINE B2 0 216 2 5 1088 5997 198 80 25 chr13 66004819 66006085 -54278227 + MurSatRep1 Unknown Unknown 1 1347 -790 6 1088 432 0 0 0 chr13 66006085 66006133 -54278179 + (TA)n Simple_repeat Simple_repeat 1 48 0 7 1088 5997 203 40 31 chr13 66006133 66006834 -54277478 + MurSatRep1 Unknown Unknown 1348 2066 -71 6 1088 2990 42 0 0 chr13 66006834 66007194 -54277118 - L1Md_A LINE L1 0 6582 6223 8 1088 5997 203 40 31 chr13 66007194 66007285 -54277027 + MurSatRep1 Unknown Unknown 2067 2136 -1 6 1088 345 311 0 0 chr13 66007319 66007451 -54276861 + MMSAT4 Satellite Satellite 37 168 0 9 1088 490 268 77 49 chr13 66007334 66007621 -54276691 + MurSatRep1 Unknown Unknown 1843 2137 0 1 1088 470 256 7 7 chr13 66007564 66007787 -54276525 + MMSAT4 Satellite Satellite 1 223 0 1 1088 471 287 75 57 chr13 66007657 66008041 -54276271 + MurSatRep1 Unknown Unknown 1747 2137 0 1 1088 469 278 0 0 chr13 66007984 66008207 -54276105 + MMSAT4 Satellite Satellite 1 223 0 1 1088 483 278 70 42 chr13 66008092 66008377 -54275935 + MurSatRep1 Unknown Unknown 1845 2137 0 1 1088 479 267 11 11 chr13 66008320 66008941 -54275371 + MMSAT4 Satellite Satellite 1 621 0 1 1088 280 299 74 60 chr13 66008749 66009048 -54275264 + MurSatRep1 Unknown Unknown 1747 2049 -88 1 1088 245 302 26 8 chr13 66009158 66009275 -54275037 + MMSAT4 Satellite Satellite 43 161 -7 1 1088 2290 145 22 25 chr13 66009854 66010257 -54274055 + RLTR9E LTR ERVK 8 409 0 1 1088 1605 229 8 42 chr13 66010419 66010798 -54273514 + ORR1B1 LTR MaLR 29 394 0 1 1088 4904 207 141 99 chr13 66010798 66011165 -54273147 + ORR1B1-int LTR MaLR 1 462 -1501 1 1088 1080 97 0 14 chr13 66011165 66011312 -54273000 + B1_Mus2 SINE Alu 2 146 -1 2 1088 4904 207 141 99 chr13 66011312 66011357 -54272955 + ORR1B1-int LTR MaLR 463 463 -1500 1 1088 543 16 0 0 chr13 66011357 66011421 -54272891 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1088 4904 221 97 103 chr13 66011421 66013464 -54270848 + ORR1B1-int LTR MaLR 15 1792 0 1 1088 270 303 46 7 chr13 66014261 66014414 -54269898 + MurSatRep1 Unknown Unknown 1891 2049 -88 2 1088 7048 226 34 43 chr13 66014749 66017003 -54267309 - L1_Mur3 LINE L1 -1568 4312 2059 2 1088 324 0 0 0 chr13 66017003 66017039 -54267273 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1088 7048 226 34 43 chr13 66017039 66017152 -54267160 - L1_Mur3 LINE L1 -3822 2058 1965 2 1088 5408 84 11 42 chr13 66017177 66017757 -54266555 - L1_Mus2 LINE L1 0 6566 6005 2 1088 1004 93 21 7 chr13 66017757 66017898 -54266414 - B1_Mus1 SINE Alu -5 143 1 2 1088 5408 84 11 42 chr13 66017898 66018126 -54266186 - L1_Mus2 LINE L1 -562 6004 5783 2 1088 36288 42 1 3 chr13 66018126 66024363 -54259949 - L1Md_T LINE L1 0 6585 262 2 1088 9291 113 11 3 chr13 66024364 66025843 -54258469 - L1_Mus2 LINE L1 -90 5793 4304 2 1088 243 245 91 10 chr13 66025849 66025948 -54258364 + MTD LTR MaLR 298 404 -15 2 1088 22 0 0 0 chr13 66026528 66026550 -54257762 + AT_rich Low_complexity Low_complexity 1 22 0 2 1088 279 264 0 0 chr13 66026755 66026827 -54257485 + Lx7 LINE L1 6745 6816 -880 3 1088 1364 239 11 17 chr13 66027487 66027840 -54256472 + Lx7 LINE L1 6802 7152 -544 3 1088 568 211 0 0 chr13 66028143 66028266 -54256046 + Lx7 LINE L1 7236 7358 -338 3 1088 210 120 59 20 chr13 66028269 66028320 -54255992 + T-rich Low_complexity Low_complexity 2 54 0 3 1088 202 158 0 26 chr13 66028486 66028525 -54255787 + (TAA)n Simple_repeat Simple_repeat 3 40 0 3 1088 1760 168 17 6 chr13 66029320 66029331 -54254981 - Lx2B LINE L1 -607 6393 6383 3 1088 1895 149 78 11 chr13 66029331 66029703 -54254609 - Lx2B LINE L1 -5 6995 6599 3 1088 1760 168 17 6 chr13 66029703 66030039 -54254273 - Lx2B LINE L1 -618 6382 6043 3 1088 1312 122 26 9 chr13 66030042 66030274 -54254038 + RMER16-int LTR ERVK 1762 1997 -3409 3 1088 1549 165 7 17 chr13 66030278 66030574 -54253738 - ORR1A3-int LTR MaLR -449 1514 1222 3 1088 257 254 0 0 chr13 66031501 66031556 -54252756 - RLTR22_Mur LTR ERVK -1792 56 2 3 1088 1038 39 0 0 chr13 66031693 66031820 -54252492 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 3 1088 233 233 39 52 chr13 66031825 66031902 -54252410 - B2_Mm1a SINE B2 -15 178 103 3 1088 265 370 7 62 chr13 66031872 66032016 -54252296 - B3 SINE B2 -74 142 7 4 1088 21 57 0 0 chr13 66032300 66032335 -54251977 + AT_rich Low_complexity Low_complexity 1 35 0 4 1088 252 269 116 61 chr13 66032493 66032691 -54251621 - RLTR25B LTR ERVK -5 1023 815 4 1088 202 246 62 16 chr13 66032778 66032906 -54251406 + (CA)n Simple_repeat Simple_repeat 2 135 0 4 1088 610 280 37 31 chr13 66034951 66035178 -54249134 - LTRIS4 LTR ERV1 0 587 280 4 1088 2101 179 41 20 chr13 66035972 66036433 -54247879 + RLTR1 LTR ERV1 132 624 0 4 1088 244 304 266 23 chr13 66037483 66037611 -54246701 - MIR SINE MIR -75 187 29 4 1088 195 0 56 28 chr13 66037611 66037647 -54246665 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 4 1088 1095 89 7 0 chr13 66037647 66037793 -54246519 - B1_Mm SINE Alu 0 147 1 4 1088 27 0 0 0 chr13 66038027 66038054 -54246258 + AT_rich Low_complexity Low_complexity 1 27 0 4 1088 233 288 85 31 chr13 66038327 66038456 -54245856 - MIRb SINE MIR -114 154 19 5 1088 373 288 103 29 chr13 66038728 66038864 -54245448 - B1_Mur3 SINE Alu 0 149 4 5 1088 1924 92 23 0 chr13 66038864 66039167 -54245145 + MusHAL1 LINE L1 1670 1979 -733 5 1088 12810 165 9 71 chr13 66039161 66041975 -54242337 - L1_Mur2 LINE L1 -1744 4133 1518 5 1088 1825 126 116 0 chr13 66041975 66042268 -54242044 - ORR1A2 LTR MaLR 0 327 1 5 1088 12810 163 49 18 chr13 66042268 66043072 -54241240 - L1_Mur2 LINE L1 -4360 1517 672 5 1088 242 219 0 147 chr13 66043398 66043473 -54240839 + MT2B LTR ERVL 152 215 -386 5 1088 408 88 0 0 chr13 66043416 66043473 -54240839 + B1_Mus2 SINE Alu 2 58 -89 5 1088 387 157 0 28 chr13 66043473 66043484 -54240828 + ID_B1 SINE B4 83 148 -76 5 1088 23 0 0 0 chr13 66043641 66043664 -54240648 + AT_rich Low_complexity Low_complexity 1 23 0 5 1088 228 224 0 0 chr13 66044405 66044454 -54239858 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1088 34 24 0 0 chr13 66044454 66044495 -54239817 + AT_rich Low_complexity Low_complexity 1 41 0 6 1088 2077 35 8 11 chr13 66044592 66044852 -54239460 + L1Md_F3 LINE L1 6324 6582 -2 6 1088 1068 108 0 0 chr13 66046130 66046278 -54238034 + B1_Mus1 SINE Alu 1 148 0 6 1088 25 31 0 0 chr13 66047263 66047295 -54237017 + AT_rich Low_complexity Low_complexity 1 32 0 6 1088 342 111 0 0 chr13 66047417 66047480 -54236832 - Lx2 LINE L1 0 6997 6935 6 1088 836 178 0 12 chr13 66047486 66047651 -54236661 + Lx2 LINE L1 6768 6930 -67 6 1088 21 0 0 0 chr13 66049562 66049583 -54234729 + AT_rich Low_complexity Low_complexity 1 21 0 6 1088 36 62 0 0 chr13 66049651 66049715 -54234597 + AT_rich Low_complexity Low_complexity 1 64 0 6 1088 254 187 37 55 chr13 66050797 66050961 -54233351 + (CCCTAA)n Simple_repeat Simple_repeat 6 166 0 6 1088 272 298 0 35 chr13 66050999 66051086 -54233226 + MT2A LTR ERVL 74 157 -376 6 1088 963 99 35 0 chr13 66051889 66052031 -54232281 - B1_Mus2 SINE Alu 0 147 1 6 1088 680 330 88 61 chr13 66054148 66054490 -54229822 + MTD LTR MaLR 53 403 -16 7 1088 433 369 34 21 chr13 66054516 66054846 -54229466 + MTD-int LTR MaLR 2 361 -1219 7 1088 5499 208 34 16 chr13 66054893 66056245 -54228067 - Lx4B LINE L1 -6 7052 5677 7 1088 449 200 16 57 chr13 66056245 66056367 -54227945 - Lx4B LINE L1 -606 6452 6336 7 1088 8574 198 72 27 chr13 66056416 66057659 -54226653 + MurSatRep1 Unknown Unknown 1 1334 -803 7 1088 297 0 0 0 chr13 66057659 66057692 -54226620 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1088 8574 198 72 27 chr13 66057692 66058278 -54226034 + MurSatRep1 Unknown Unknown 1335 1945 -192 7 1088 297 0 0 0 chr13 66058278 66058311 -54226001 + (TA)n Simple_repeat Simple_repeat 2 34 0 7 1088 8574 198 72 27 chr13 66058311 66058433 -54225879 + MurSatRep1 Unknown Unknown 1946 2062 -75 7 1088 3030 61 0 0 chr13 66058433 66058793 -54225519 - L1Md_T LINE L1 0 6582 6223 7 1088 8574 198 72 27 chr13 66058793 66058884 -54225428 + MurSatRep1 Unknown Unknown 2063 2136 -1 7 1088 401 311 0 0 chr13 66058918 66059050 -54225262 + MMSAT4 Satellite Satellite 37 168 0 7 1088 583 287 79 58 chr13 66058933 66059472 -54224840 + MurSatRep1 Unknown Unknown 1747 2137 0 7 1088 568 252 22 22 chr13 66059415 66059868 -54224444 + MMSAT4 Satellite Satellite 1 453 -5 7 16 228 360 25 20 chr13 66060197 66060401 -54223911 + MurSatRep1 Unknown Unknown 1845 2049 -88 8 1089 282 303 16 16 chr13 66060605 66060729 -54223583 + MMSAT4 Satellite Satellite 45 168 0 8 1089 236 322 44 71 chr13 66060695 66060877 -54223435 + MurSatRep1 Unknown Unknown 1759 1935 -202 8 1089 2619 142 5 26 chr13 66060877 66061295 -54223017 + RLTR9E LTR ERVK 1 409 0 8 1089 236 322 44 71 chr13 66061295 66061409 -54222903 + MurSatRep1 Unknown Unknown 1936 2047 -90 8 1089 1461 239 5 45 chr13 66061451 66061832 -54222480 + ORR1A4 LTR MaLR 29 394 0 8 1089 5416 202 126 148 chr13 66061832 66062008 -54222304 + ORR1A4-int LTR MaLR 1 224 -1739 8 1089 1835 11 0 0 chr13 66062008 66062199 -54222113 - B2_Mm1a SINE B2 -1 192 2 8 1089 5416 202 126 148 chr13 66062199 66062398 -54221914 + ORR1A4-int LTR MaLR 225 451 -1512 8 1089 1175 79 0 0 chr13 66062398 66062538 -54221774 + B1_Mm SINE Alu 2 141 -6 8 1089 5416 202 126 148 chr13 66062538 66063892 -54220420 + ORR1A4-int LTR MaLR 452 1756 -207 8 1089 1099 122 7 0 chr13 66063892 66064039 -54220273 + B1_Mus1 SINE Alu 1 148 0 8 1089 5416 202 126 148 chr13 66064039 66064315 -54219997 + ORR1A4-int LTR MaLR 1757 1963 0 8 1089 1655 193 0 56 chr13 66064315 66064655 -54219657 + ORR1A4 LTR MaLR 1 321 -8 8 1089 314 316 46 7 chr13 66065410 66065563 -54218749 + MurSatRep1 Unknown Unknown 1891 2049 -88 8 1089 10372 101 3 2 chr13 66065662 66067108 -54217204 - L1_Mm LINE L1 -136 5747 4300 8 1089 325 204 91 10 chr13 66067108 66067207 -54217105 + MTD LTR MaLR 298 404 -15 9 1089 22 0 0 0 chr13 66067789 66067811 -54216501 + AT_rich Low_complexity Low_complexity 1 22 0 9 1089 319 256 0 0 chr13 66068006 66068088 -54216224 + Lx7 LINE L1 6735 6816 -880 9 1089 1415 265 46 15 chr13 66068772 66069167 -54215145 + Lx7 LINE L1 6806 7212 -484 9 1089 593 184 18 0 chr13 66069426 66069535 -54214777 + Lx7 LINE L1 7236 7346 -350 9 1089 194 125 0 20 chr13 66069550 66069599 -54214713 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 9 1089 22 0 0 0 chr13 66069756 66069778 -54214534 + AT_rich Low_complexity Low_complexity 1 22 0 9 1089 2033 155 78 11 chr13 66070646 66071018 -54213294 - Lx2B LINE L1 -5 6995 6599 9 1089 1878 162 15 6 chr13 66071027 66071357 -54212955 - Lx2B LINE L1 -629 6371 6039 9 1089 1459 124 13 13 chr13 66071357 66071585 -54212727 + RMER16-int LTR ERVK 1762 1989 -3417 9 1089 1609 164 10 17 chr13 66071594 66071886 -54212426 - ORR1A3-int LTR MaLR -449 1514 1225 9 1089 888 82 0 0 chr13 66073017 66073139 -54211173 + (TC)n Simple_repeat Simple_repeat 1 122 0 9 1089 420 235 0 0 chr13 66073141 66073256 -54211056 + CT-rich Low_complexity Low_complexity 1 115 0 9 1089 307 275 125 42 chr13 66073256 66073400 -54210912 - HAL1-3A_ME LINE L1 -419 2439 2284 1 1089 218 125 45 45 chr13 66073410 66073477 -54210835 + CT-rich Low_complexity Low_complexity 5 71 0 1 1089 1196 63 0 11 chr13 66073477 66073653 -54210659 + (TTTCC)n Simple_repeat Simple_repeat 3 176 0 1 1089 23 0 0 0 chr13 66073653 66073676 -54210636 + AT_rich Low_complexity Low_complexity 1 23 0 1 1089 231 274 32 0 chr13 66073789 66073851 -54210461 - B2_Mm1t SINE B2 -119 74 11 1 1089 21 57 0 0 chr13 66074139 66074174 -54210138 + AT_rich Low_complexity Low_complexity 1 35 0 1 1089 368 130 52 9 chr13 66074688 66074804 -54209508 + (CA)n Simple_repeat Simple_repeat 1 121 0 1 1089 260 254 50 7 chr13 66074815 66074954 -54209358 + (CA)n Simple_repeat Simple_repeat 1 145 0 1 1089 213 65 0 0 chr13 66075446 66075477 -54208835 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 1089 1172 59 0 0 chr13 66075477 66075612 -54208700 - B1_Mus2 SINE Alu -11 136 2 1 1089 313 338 0 0 chr13 66077286 66077496 -54206816 - MMSAT4 Satellite Satellite 0 210 1 1 1089 339 281 28 28 chr13 66077535 66077678 -54206634 - MMSAT4 Satellite Satellite -1 167 25 1 1089 450 300 45 40 chr13 66077709 66077907 -54206405 - MurSatRep1 Unknown Unknown -88 2049 1851 1 1089 371 287 25 17 chr13 66077882 66078168 -54206144 - MMSAT4 Satellite Satellite 0 288 1 1 1089 245 368 15 25 chr13 66078042 66078240 -54206072 - MurSatRep1 Unknown Unknown -88 2049 1854 1 1089 7414 185 83 137 chr13 66078214 66078424 -54205888 - MurSatRep1 Unknown Unknown -1 2136 1924 1 1089 1239 68 0 0 chr13 66078424 66078570 -54205742 - B1_Mus1 SINE Alu -2 146 1 1 1089 7414 185 83 137 chr13 66078570 66079424 -54204888 - MurSatRep1 Unknown Unknown -214 1923 990 1 1089 355 216 78 94 chr13 66079424 66079436 -54204876 - PB1 SINE Alu 0 127 117 1 1089 609 52 0 0 chr13 66079436 66079513 -54204799 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 1 1089 823 86 3 3 chr13 66079513 66079628 -54204684 - B1_Mus1 SINE Alu -11 116 2 1 1089 459 232 99 84 chr13 66079628 66079728 -54204584 - MT2B LTR ERVL -446 155 53 1 1089 7414 185 83 137 chr13 66079628 66080692 -54203620 - MurSatRep1 Unknown Unknown -1148 989 1 1 1089 210 213 21 0 chr13 66081215 66081262 -54203050 + B1_Mus2 SINE Alu 100 147 0 1 1089 21 57 0 0 chr13 66081262 66081297 -54203015 + AT_rich Low_complexity Low_complexity 1 35 0 1 1089 238 35 0 0 chr13 66081452 66081481 -54202831 + Lx4B LINE L1 6353 6381 -677 1 1089 1121 178 9 9 chr13 66081502 66081712 -54202600 + Lx4B LINE L1 6690 6899 -159 1 1089 3401 99 34 13 chr13 66082360 66082832 -54201480 + RLTR45 LTR ERVK 1 482 0 1 1089 10336 66 61 5 chr13 66082832 66084174 -54200138 + RLTR45-int LTR ERVK 1 1418 -5826 1 1089 10805 38 20 9 chr13 66084168 66085506 -54198806 + RLTR45-int LTR ERVK 1859 3211 -4033 1 1089 4541 63 7 24 chr13 66085479 66086097 -54198215 + RLTR45-int LTR ERVK 3380 3986 -3258 1 1089 7973 50 0 10 chr13 66086090 66087066 -54197246 + RLTR45-int LTR ERVK 5065 6030 -1214 1 1089 1614 88 3 150 chr13 66087070 66087116 -54197196 + RLTR13B1 LTR ERVK 247 293 -600 1 1089 1285 48 0 0 chr13 66087116 66087263 -54197049 + B1_Mus2 SINE Alu 1 147 0 1 1089 1614 88 3 150 chr13 66087263 66087523 -54196789 + RLTR13B1 LTR ERVK 294 508 -385 1 1089 4874 44 0 20 chr13 66087523 66088010 -54196302 + RLTR45-int LTR ERVK 6333 6818 -426 1 1089 763 11 0 0 chr13 66088010 66088101 -54196211 + L1Md_T LINE L1 6492 6582 0 1 1089 4874 44 0 20 chr13 66088101 66088198 -54196114 + RLTR45-int LTR ERVK 6819 6905 -339 1 1089 578 184 65 14 chr13 66088198 66088336 -54195976 + L1_Mur3 LINE L1 1546 1690 -4190 1 1089 2775 58 9 156 chr13 66088343 66088797 -54195515 + RLTR10 LTR ERVK 1 387 -3 1 1089 7799 41 27 2 chr13 66088812 66089747 -54194565 + RLTR10-int LTR ERVK 41 998 -989 1 1089 326 256 62 39 chr13 66089811 66089941 -54194371 + RLTR10-int LTR ERVK 1462 1594 -5987 1 1089 8827 24 0 2 chr13 66090023 66091020 -54193292 + RLTR10-int LTR ERVK 990 1984 -3 1 1089 2870 50 9 156 chr13 66091022 66091477 -54192835 + RLTR10 LTR ERVK 1 388 -2 1 1089 628 225 5 91 chr13 66091486 66091696 -54192616 + L1_Mur3 LINE L1 1644 1835 -4045 1 1089 364 326 29 82 chr13 66092786 66093030 -54191282 - MT2A LTR ERVL -228 305 75 1 1089 251 100 60 0 chr13 66093114 66093164 -54191148 + (TTAGGG)n Simple_repeat Simple_repeat 6 58 0 1 1089 1127 102 0 0 chr13 66094595 66094742 -54189570 - B1_Mus1 SINE Alu 0 148 2 1 1089 1066 174 20 3 chr13 66095281 66096279 -54188033 + MMSAT4 Satellite Satellite 1 1015 0 1 1089 513 347 28 36 chr13 66096731 66096982 -54187330 + RMER15 LTR ERVL 226 474 -101 1 1089 1510 125 81 8 chr13 66097806 66098064 -54186248 - L1_Mus4 LINE L1 0 6636 6360 1 1089 3491 49 110 2 chr13 66098064 66098493 -54185819 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1089 14695 59 11 1 chr13 66098495 66100300 -54184012 - IAPEz-int LTR ERVK -2 6479 4656 1 1089 1882 98 0 0 chr13 66100299 66100545 -54183767 - IAPEz-int LTR ERVK -5183 2497 2252 1 1089 934 76 0 0 chr13 66100546 66100665 -54183647 - IAPEz-int LTR ERVK -5004 1477 1359 1 1089 3468 64 14 16 chr13 66100665 66101236 -54183076 - IAPEz-int LTR ERVK -5819 662 168 1 1089 241 321 0 0 chr13 66101236 66101289 -54183023 - RLTR27 LTR ERVK -34 275 223 1 1089 228 321 0 0 chr13 66101317 66101370 -54182942 - RLTR27 LTR ERVK -34 275 223 1 1089 228 321 0 0 chr13 66101398 66101451 -54182861 - RLTR27 LTR ERVK -34 275 223 1 1089 1118 73 50 119 chr13 66101451 66101652 -54182660 - IAPEz-int LTR ERVK -6286 195 9 1 1089 3444 49 115 2 chr13 66101653 66102080 -54182232 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1089 660 70 0 0 chr13 66102081 66102167 -54182145 - L1_Mus4 LINE L1 -272 6364 6279 1 1089 3228 187 26 26 chr13 66102167 66102815 -54181497 + RLTR18-int LTR ERVK 2903 3550 -1811 1 1089 1187 83 0 17 chr13 66102831 66103003 -54181309 - B2_Mm2 SINE B2 -25 170 2 1 1089 845 177 20 0 chr13 66103018 66103165 -54181147 - B1_Mur4 SINE Alu 0 150 1 1 1089 2582 168 158 45 chr13 66103165 66103937 -54180375 + RLTR18-int LTR ERVK 3518 4369 -992 1 1089 791 181 265 0 chr13 66103937 66104103 -54180209 - B3 SINE B2 -5 211 2 1 1089 2582 166 68 74 chr13 66104103 66104238 -54180074 + RLTR18-int LTR ERVK 4370 4511 -850 1 1089 335 188 0 15 chr13 66104242 66104307 -54180005 - RLTR18B LTR ERVK -411 101 38 1 1089 1141 161 131 0 chr13 66104307 66104506 -54179806 + URR1A DNA MER1_type 1 225 -1 1 1089 2605 178 32 6 chr13 66104688 66105190 -54179122 - RLTR11A2 LTR ERVK -12 515 1 1 1089 312 250 0 50 chr13 66105230 66105310 -54179002 + polypyrimidine Low_complexity Low_complexity 3 78 0 1 1089 467 231 207 0 chr13 66105320 66105441 -54178871 - B1_Mur2 SINE Alu -1 148 3 1 1089 844 209 34 86 chr13 66105482 66105691 -54178621 - B3A SINE B2 0 198 1 1 1089 23 0 0 0 chr13 66105837 66105860 -54178452 + AT_rich Low_complexity Low_complexity 1 23 0 1 1089 631 271 0 17 chr13 66105885 66106005 -54178307 - RSINE1 SINE B4 -30 135 18 1 1089 1147 217 65 90 chr13 66106066 66106542 -54177770 + MT2B LTR ERVL 6 601 0 1 1089 194 404 10 10 chr13 66106660 66106760 -54177552 - L2a LINE L2 -281 3145 3046 1 1089 332 351 78 67 chr13 66107056 66107343 -54176969 + MLT1G1 LTR MaLR 90 344 -235 1 1089 880 163 21 7 chr13 66107446 66107588 -54176724 + B1_Mus1 SINE Alu 3 146 -2 1 1089 252 120 0 0 chr13 66107589 66107639 -54176673 + (CAAA)n Simple_repeat Simple_repeat 1 50 0 1 1089 860 275 45 0 chr13 66107725 66107925 -54176387 - B3 SINE B2 -6 210 2 1 1089 581 259 0 0 chr13 66107987 66108095 -54176217 - PB1D9 SINE Alu -10 110 3 1 1089 345 313 130 0 chr13 66108183 66108298 -54176014 + RSINE1 SINE B4 3 132 -33 1 1089 321 309 78 35 chr13 66108316 66108457 -54175855 + B4 SINE B4 77 223 -69 1 1089 821 163 27 34 chr13 66108331 66108477 -54175835 + B1_Mur4 SINE Alu 5 149 -1 1 1089 270 56 0 0 chr13 66108500 66108536 -54175776 + (CGG)n Simple_repeat Simple_repeat 2 37 0 1 1089 25 0 0 0 chr13 66109615 66109640 -54174672 + AT_rich Low_complexity Low_complexity 1 25 0 1 1089 30 0 0 0 chr13 66109820 66109850 -54174462 + AT_rich Low_complexity Low_complexity 1 30 0 1 1089 26 0 0 0 chr13 66110045 66110071 -54174241 + AT_rich Low_complexity Low_complexity 1 26 0 1 1089 27 29 0 0 chr13 66111471 66111505 -54172807 + AT_rich Low_complexity Low_complexity 1 34 0 1 1089 26 30 0 0 chr13 66112949 66112982 -54171330 + AT_rich Low_complexity Low_complexity 1 33 0 1 1089 1122 208 4 4 chr13 66113001 66113233 -54171079 - MTC LTR MaLR -8 413 182 1 1089 2769 39 89 0 chr13 66113233 66113570 -54170742 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1089 56649 21 15 7 chr13 66113570 66119989 -54164323 + IAPEz-int LTR ERVK 8 6481 0 1 1089 2769 39 89 0 chr13 66119989 66120326 -54163986 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1089 1310 90 21 0 chr13 66120508 66120696 -54163616 + B2_Mm1t SINE B2 2 193 0 1 1089 317 218 13 0 chr13 66120704 66120798 -54163514 + Lx2 LINE L1 6909 6982 -15 1 1089 627 205 70 8 chr13 66120816 66120944 -54163368 + B1_Mur2 SINE Alu 1 136 -13 1 1089 197 65 0 31 chr13 66120944 66120976 -54163336 + (CCAA)n Simple_repeat Simple_repeat 4 34 0 1 1089 298 292 97 9 chr13 66121998 66122112 -54162200 + ORR1E LTR MaLR 19 142 -217 1 1089 273 259 0 0 chr13 66122467 66122521 -54161791 - B4 SINE B4 -10 282 229 1 1089 305 93 0 18 chr13 66122533 66122588 -54161724 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1089 419 349 18 35 chr13 66122644 66122929 -54161383 - B4A SINE B4 -12 280 1 1 1089 470 320 86 19 chr13 66122951 66123161 -54161151 - B4 SINE B4 -68 224 1 1 1089 3560 13 2 0 chr13 66123597 66123992 -54160320 + MTA_Mm LTR MaLR 1 396 0 1 1089 821 141 14 40 chr13 66124147 66124295 -54160017 + B1_Mur3 SINE Alu 1 144 -5 1 1089 640 207 57 0 chr13 66124396 66124536 -54159776 - B1_Mur3 SINE Alu -1 148 1 1 1089 1299 170 175 35 chr13 66124981 66125353 -54158959 + RLTR33 LTR ERVK 1 424 -254 1 1089 22 88 0 0 chr13 66126187 66126244 -54158068 + AT_rich Low_complexity Low_complexity 1 57 0 1 1089 197 204 18 73 chr13 66127347 66127511 -54156801 + (CCCTAA)n Simple_repeat Simple_repeat 6 160 0 1 1089 21 0 0 0 chr13 66127863 66127884 -54156428 + AT_rich Low_complexity Low_complexity 1 21 0 1 1089 1367 241 65 58 chr13 66128859 66129378 -54154934 - L1_Mur3 LINE L1 -4044 1836 1314 1 1089 215 219 45 45 chr13 66129504 66129614 -54154698 + (TCTCTG)n Simple_repeat Simple_repeat 4 113 0 1 1089 488 250 81 0 chr13 66129703 66129875 -54154437 - L1_Mur3 LINE L1 -6637 1091 906 1 1089 504 0 0 0 chr13 66129887 66129943 -54154369 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 1 1089 1018 117 0 0 chr13 66129943 66130088 -54154224 - B1_Mus2 SINE Alu -2 145 1 1 1089 234 373 78 11 chr13 66130159 66130606 -54153706 - L1_Mur3 LINE L1 -7205 523 47 1 1089 3550 29 0 0 chr13 66131495 66131904 -54152408 + L1Md_T LINE L1 6172 6580 -2 1 1089 228 254 0 27 chr13 66132422 66132495 -54151817 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 1 1089 219 149 39 51 chr13 66132508 66132586 -54151726 + (CCCTAA)n Simple_repeat Simple_repeat 6 82 0 1 1089 1387 254 52 52 chr13 66133467 66133990 -54150322 - L1_Mur3 LINE L1 -4044 1836 1314 1 1089 485 336 88 61 chr13 66135633 66135975 -54148337 + MTD LTR MaLR 53 403 -16 1 1089 322 348 59 49 chr13 66136001 66136330 -54147982 + MTD-int LTR MaLR 2 361 -1219 1 1089 6184 204 36 19 chr13 66136377 66137755 -54146557 - Lx4B LINE L1 -6 7052 5651 1 1089 466 200 16 50 chr13 66137728 66137849 -54146463 - Lx4B LINE L1 -606 6452 6336 1 1089 892 164 6 0 chr13 66137898 66138057 -54146255 + MurSatRep1 Unknown Unknown 1 160 -1977 1 1089 26 0 0 0 chr13 66138165 66138191 -54146121 + AT_rich Low_complexity Low_complexity 1 26 0 1 1089 352 358 14 45 chr13 66138459 66138681 -54145631 - B3 SINE B2 0 216 2 1 1089 8844 194 72 18 chr13 66138777 66140031 -54144281 + MurSatRep1 Unknown Unknown 1 1334 -803 1 1089 264 30 0 0 chr13 66140031 66140064 -54144248 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1089 423 0 0 0 chr13 66140064 66140110 -54144202 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1089 8844 259 69 36 chr13 66140110 66141246 -54143066 + MurSatRep1 Unknown Unknown 1335 1837 -300 1 1089 550 226 14 14 chr13 66141246 66141385 -54142927 + MMSAT4 Satellite Satellite 30 168 0 2 1089 8844 259 69 36 chr13 66141385 66142061 -54142251 + MurSatRep1 Unknown Unknown 1838 2137 0 1 1089 279 300 28 16 chr13 66142176 66142394 -54141918 + MMSAT4 Satellite Satellite 1 220 -6 2 1089 233 352 37 30 chr13 66142185 66142484 -54141828 + MurSatRep1 Unknown Unknown 1749 2049 -88 2 1089 239 316 54 60 chr13 66142773 66142958 -54141354 + MurSatRep1 Unknown Unknown 1835 2018 -119 2 1089 2110 148 22 25 chr13 66142970 66143373 -54140939 + RLTR9E LTR ERVK 8 409 0 2 1089 247 303 0 0 chr13 66143415 66143491 -54140821 + MMSAT4 Satellite Satellite 17 92 -76 2 1089 1458 229 8 42 chr13 66143535 66143914 -54140398 + ORR1B1 LTR MaLR 29 394 0 2 1089 2336 252 130 130 chr13 66143914 66144282 -54140030 + ORR1B1-int LTR MaLR 1 451 -1512 2 1089 1062 103 0 14 chr13 66144282 66144429 -54139883 + B1_Mus2 SINE Alu 3 147 0 2 1089 2336 245 91 119 chr13 66144429 66146586 -54137726 + ORR1B1-int LTR MaLR 15 1963 0 2 1089 293 316 46 7 chr13 66147383 66147536 -54136776 + MurSatRep1 Unknown Unknown 1891 2049 -88 2 1089 7705 220 36 55 chr13 66147875 66148568 -54135744 - L1_Mur3 LINE L1 -1568 4312 3613 2 1089 4480 20 0 0 chr13 66148568 66149061 -54135251 - MT2_Mm LTR ERVL 0 493 1 2 1089 7705 220 36 55 chr13 66149061 66150762 -54133550 - L1_Mur3 LINE L1 -2268 3612 1965 2 1089 7012 68 23 39 chr13 66150785 66151371 -54132941 - L1_Mus2 LINE L1 0 6566 6011 2 1089 886 140 21 7 chr13 66151371 66151515 -54132797 - B1_Mus1 SINE Alu -2 146 1 2 1089 10672 102 13 10 chr13 66151515 66153208 -54131104 - L1_Mus2 LINE L1 -556 6010 4304 2 1089 247 263 81 0 chr13 66153214 66153313 -54130999 + MTD LTR MaLR 298 404 -15 2 1089 33703 32 3 8 chr13 66153873 66158656 -54125656 - L1Md_A LINE L1 -710 5173 422 2 1089 444 37 0 0 chr13 66158925 66158979 -54125333 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1089 1945 182 43 14 chr13 66159440 66159892 -54124420 - RLTR1 LTR ERV1 0 624 135 2 1089 472 293 43 23 chr13 66160720 66160938 -54123374 + LTRIS4 LTR ERV1 286 587 0 2 1089 304 210 56 19 chr13 66162888 66163048 -54121264 + (TG)n Simple_repeat Simple_repeat 1 166 0 2 1089 393 246 19 152 chr13 66163954 66164165 -54120147 + B2_Mm1a SINE B2 11 193 0 2 1089 1445 162 10 24 chr13 66165293 66165590 -54118722 + ORR1A3-int LTR MaLR 1222 1514 -449 2 1089 1433 129 13 4 chr13 66165599 66165825 -54118487 - RMER16-int LTR ERVK -3417 1989 1762 2 1089 1859 185 15 3 chr13 66165825 66166155 -54118157 + Lx2 LINE L1 6039 6372 -625 2 1089 1830 164 72 5 chr13 66166164 66166538 -54117774 + Lx2 LINE L1 6599 6997 -3 2 1089 21 0 0 0 chr13 66167397 66167418 -54116894 + AT_rich Low_complexity Low_complexity 1 21 0 2 1089 646 233 34 39 chr13 66167575 66167754 -54116558 - Lx7 LINE L1 -283 7413 7236 2 1089 2560 81 3 65 chr13 66167803 66168171 -54116141 + L1_Mus2 LINE L1 6219 6563 -3 2 1089 1265 245 20 77 chr13 66168195 66168309 -54116003 + L1_Mur3 LINE L1 1965 2057 -3823 2 1089 225 0 0 0 chr13 66168309 66168334 -54115978 + (CA)n Simple_repeat Simple_repeat 1 25 0 2 1089 1265 245 20 77 chr13 66168334 66168675 -54115637 + L1_Mur3 LINE L1 2058 2394 -3486 2 1089 424 383 21 26 chr13 66168685 66168918 -54115394 + B4A SINE B4 60 291 -1 2 1089 449 84 0 14 chr13 66168952 66169024 -54115288 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1089 295 259 0 0 chr13 66169036 66169090 -54115222 + B4 SINE B4 229 282 -10 2 1089 370 324 101 49 chr13 66169266 66169574 -54114738 - ORR1E LTR MaLR -17 342 19 2 1089 1818 11 0 0 chr13 66170157 66170345 -54113967 - B2_Mm1a SINE B2 -4 189 2 2 1089 218 32 0 31 chr13 66170806 66170838 -54113474 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 2 1089 648 213 70 8 chr13 66170838 66170966 -54113346 - B1_Mur2 SINE Alu -13 136 1 2 1089 334 192 14 0 chr13 66171005 66171078 -54113234 - Lx2 LINE L1 -15 6982 6909 2 1089 1364 106 11 0 chr13 66171092 66171280 -54113032 - B2_Mm1t SINE B2 -2 191 2 2 1089 3700 15 5 0 chr13 66171365 66171759 -54112553 - MTA_Mm LTR MaLR 0 396 1 2 1089 1126 205 13 13 chr13 66171855 66172087 -54112225 + MTC LTR MaLR 182 413 -8 2 1089 828 162 27 34 chr13 66172106 66172253 -54112059 - B1_Mur4 SINE Alu 0 150 5 2 1089 326 296 77 56 chr13 66172125 66172268 -54112044 - B4 SINE B4 -70 222 77 2 1089 334 297 144 0 chr13 66172285 66172396 -54111916 - RSINE1 SINE B4 -33 132 6 2 1089 641 212 0 0 chr13 66172487 66172586 -54111726 + PB1D9 SINE Alu 3 101 -19 2 1089 826 272 64 0 chr13 66172657 66172859 -54111453 + B3 SINE B2 2 216 0 2 1089 204 125 0 0 chr13 66172941 66172973 -54111339 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 2 1089 924 161 21 7 chr13 66172973 66173117 -54111195 - B1_Mus1 SINE Alu -2 146 1 2 1089 355 352 77 61 chr13 66173218 66173547 -54110765 - MLT1G1 LTR MaLR -235 344 1 2 1089 195 430 0 0 chr13 66173795 66173895 -54110417 + L2a LINE L2 3046 3145 -281 2 1089 1241 198 65 90 chr13 66174013 66174489 -54109823 - MT2A LTR ERVL 0 601 6 2 1089 240 150 0 0 chr13 66174486 66174526 -54109786 + ID_B1 SINE B4 184 223 -1 2 1089 540 314 0 17 chr13 66174550 66174670 -54109642 + RSINE1 SINE B4 18 135 -30 2 1089 785 243 21 48 chr13 66174863 66175049 -54109263 + B3A SINE B2 1 181 -17 2 1089 467 231 207 0 chr13 66175093 66175214 -54109098 + B1_Mur2 SINE Alu 3 148 -1 2 1089 325 299 0 22 chr13 66175219 66175308 -54109004 + G-rich Low_complexity Low_complexity 6 92 0 2 1089 2395 186 75 6 chr13 66175345 66175827 -54108485 + RLTR11A2 LTR ERVK 1 515 -12 2 1089 1134 161 131 0 chr13 66176009 66176208 -54108104 - URR1A DNA MER1_type -1 225 1 2 1089 346 172 0 15 chr13 66176208 66176273 -54108039 + RLTR18B LTR ERVK 38 101 -411 2 1089 2553 159 71 78 chr13 66176277 66176412 -54107900 - RLTR18-int LTR ERVK -850 4511 4370 2 1089 758 187 265 0 chr13 66176412 66176578 -54107734 + B3 SINE B2 2 211 -5 2 1089 2553 167 160 47 chr13 66176578 66177350 -54106962 - RLTR18-int LTR ERVK -992 4369 3518 2 1089 899 148 21 0 chr13 66177350 66177492 -54106820 + B1_Mur4 SINE Alu 1 145 -5 2 1089 1306 59 0 12 chr13 66177507 66177678 -54106634 + B2_Mm2 SINE B2 2 170 -25 2 1089 2908 197 29 26 chr13 66177715 66178339 -54105973 - RLTR18-int LTR ERVK -1830 3531 2906 2 1089 2088 73 4 0 chr13 66178341 66178616 -54105696 + RLTR10A LTR ERVK 1 276 -135 2 1089 1730 167 7 0 chr13 66178617 66178893 -54105419 + RLTR27 LTR ERVK 32 309 0 2 1089 799 40 0 0 chr13 66178911 66179010 -54105302 - MTB LTR MaLR -4 322 224 2 1089 1013 99 6 38 chr13 66179414 66179450 -54104862 - MTB LTR MaLR -247 153 122 2 1089 2411 141 12 45 chr13 66179450 66179873 -54104439 + RLTR9E LTR ERVK 1 409 0 2 1089 1013 99 6 38 chr13 66179873 66179994 -54104318 - MTB LTR MaLR -279 121 1 2 1089 189 0 0 0 chr13 66180041 66180062 -54104250 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 1089 343 247 72 41 chr13 66180115 66180212 -54104100 - PB1D10 SINE Alu -5 112 13 2 1089 242 284 23 69 chr13 66180134 66180221 -54104091 - B4A SINE B4 -121 171 89 2 1089 875 98 0 8 chr13 66180271 66180404 -54103908 + (TTC)n Simple_repeat Simple_repeat 1 132 0 2 1089 295 202 0 23 chr13 66180413 66180499 -54103813 + CT-rich Low_complexity Low_complexity 2 85 0 2 1089 4258 99 40 29 chr13 66180607 66181232 -54103080 + L1_Mus4 LINE L1 6005 6636 0 2 1089 24 53 0 0 chr13 66181307 66181345 -54102967 + AT_rich Low_complexity Low_complexity 1 38 0 2 1089 255 276 63 98 chr13 66181506 66181711 -54102601 - RLTR25A LTR ERVK -9 1094 897 2 1089 206 241 67 18 chr13 66181732 66181897 -54102415 + (CA)n Simple_repeat Simple_repeat 1 173 0 2 1089 263 28 28 0 chr13 66181911 66181947 -54102365 + (CA)n Simple_repeat Simple_repeat 1 37 0 2 1089 4490 106 5 2 chr13 66183308 66183893 -54100419 - LTRIS_Mus LTR ERV1 0 587 1 2 1089 588 275 43 52 chr13 66184621 66184851 -54099461 - LTRIS4 LTR ERV1 0 507 280 2 1089 208 102 20 20 chr13 66185446 66185496 -54098816 + (TGGGGG)n Simple_repeat Simple_repeat 1 50 0 2 1089 27 0 0 0 chr13 66185898 66185925 -54098387 + AT_rich Low_complexity Low_complexity 1 27 0 2 1089 365 230 55 91 chr13 66186022 66186132 -54098180 - B4 SINE B4 -103 189 84 2 1089 281 357 0 0 chr13 66187059 66187269 -54097043 - MMSAT4 Satellite Satellite 0 210 1 2 1089 239 335 66 52 chr13 66187269 66187341 -54096971 - MurSatRep1 Unknown Unknown -88 2044 1759 2 1089 351 273 24 24 chr13 66187308 66187432 -54096880 - MMSAT4 Satellite Satellite -1 167 44 2 1089 428 259 72 51 chr13 66187495 66187690 -54096622 - MurSatRep1 Unknown Unknown -184 1953 1755 2 1089 367 279 31 21 chr13 66187652 66187948 -54096364 - MMSAT4 Satellite Satellite 0 298 1 2 1089 943 267 57 18 chr13 66187812 66188187 -54096125 - MurSatRep1 Unknown Unknown -1 2136 1791 2 136 34883 25 3 0 chr13 66188184 66192917 -54091395 - L1Md_T LINE L1 -1 6581 1838 2 1090 799 170 4 0 chr13 66192917 66193077 -54091235 + MMSAT4 Satellite Satellite 1 160 0 2 1090 622 351 83 21 chr13 66193534 66193871 -54090441 + RMER15 LTR ERVL 218 575 0 2 1090 4550 94 24 5 chr13 66194613 66195233 -54089079 - L1_Mus4 LINE L1 0 6636 6005 2 1090 241 226 8 39 chr13 66195352 66195410 -54088902 + GA-rich Low_complexity Low_complexity 2 59 0 2 1090 1296 48 0 0 chr13 66195410 66195557 -54088755 + B1_Mus2 SINE Alu 1 147 0 2 1090 241 226 8 39 chr13 66195557 66195606 -54088706 + polypurine Low_complexity Low_complexity 60 106 0 2 1090 1077 140 0 0 chr13 66195606 66195784 -54088528 + (GAA)n Simple_repeat Simple_repeat 1 178 0 2 1090 241 226 8 39 chr13 66195784 66195804 -54088508 + polypurine Low_complexity Low_complexity 107 126 0 2 1090 251 275 0 91 chr13 66195845 66195933 -54088379 + B4A SINE B4 89 168 -124 2 1090 371 226 72 41 chr13 66195854 66195951 -54088361 + PB1D10 SINE Alu 13 112 -5 2 1090 570 98 0 0 chr13 66196006 66196088 -54088224 + (TA)n Simple_repeat Simple_repeat 1 82 0 2 1090 1027 92 6 38 chr13 66196120 66196241 -54088071 + MTB LTR MaLR 1 121 -279 2 1090 2504 127 14 36 chr13 66196241 66196659 -54087653 - RLTR9E LTR ERVK 0 409 1 2 1090 1027 92 6 38 chr13 66196659 66196695 -54087617 + MTB LTR MaLR 122 153 -247 2 1090 766 61 0 0 chr13 66197099 66197198 -54087114 + MTB LTR MaLR 224 322 -4 2 1090 3298 181 27 24 chr13 66197198 66197836 -54086476 + RLTR18-int LTR ERVK 2892 3531 -1830 3 1090 1179 83 6 18 chr13 66197874 66198045 -54086267 - B2_Mm2 SINE B2 -25 170 2 3 1090 903 151 20 0 chr13 66198056 66198202 -54086110 - B1_Mur4 SINE Alu -1 149 1 3 1090 2449 176 159 45 chr13 66198202 66198973 -54085339 + RLTR18-int LTR ERVK 3518 4369 -992 3 1090 774 181 265 0 chr13 66198973 66199139 -54085173 - B3 SINE B2 -5 211 2 3 1090 2449 175 69 74 chr13 66199139 66199274 -54085038 + RLTR18-int LTR ERVK 4370 4511 -850 3 1090 365 188 0 0 chr13 66199278 66199342 -54084970 - RLTR18B LTR ERVK -411 101 38 3 1090 1090 167 136 0 chr13 66199342 66199540 -54084772 + URR1A DNA MER1_type 1 225 -1 3 1090 2914 73 143 139 chr13 66199568 66200078 -54084234 + RLTR1B LTR ERV1 1 512 0 3 1090 239 256 37 49 chr13 66200095 66200177 -54084135 + Charlie1b DNA MER1_type 104 184 -339 3 1090 2524 184 44 14 chr13 66200238 66200735 -54083577 - RLTR11A2 LTR ERVK -15 512 1 3 1090 215 214 87 10 chr13 66200775 66200879 -54083433 + CT-rich Low_complexity Low_complexity 3 114 0 3 1090 431 256 207 0 chr13 66200889 66201010 -54083302 - B1_Mur2 SINE Alu -1 148 3 3 1090 806 237 19 67 chr13 66201032 66201240 -54083072 - B3A SINE B2 0 198 1 3 1090 207 0 0 0 chr13 66201420 66201443 -54082869 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 3 1090 593 280 0 17 chr13 66201448 66201568 -54082744 - RSINE1 SINE B4 -30 135 18 3 1090 246 125 0 0 chr13 66201592 66201632 -54082680 - ID_B1 SINE B4 -1 223 184 3 1090 970 171 34 135 chr13 66201629 66201866 -54082446 + MT2A LTR ERVL 6 218 -315 3 1090 339 182 19 67 chr13 66201867 66201979 -54082333 + Lx2B LINE L1 6897 6999 -1 3 1090 675 214 68 8 chr13 66201994 66202126 -54082186 + B1_Mur2 SINE Alu 1 140 -9 3 1090 183 80 0 0 chr13 66202129 66202154 -54082158 + (CCAA)n Simple_repeat Simple_repeat 2 26 0 3 1090 390 57 0 0 chr13 66202632 66202685 -54081627 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1090 347 338 91 39 chr13 66203229 66203537 -54080775 + ORR1E LTR MaLR 19 342 -17 3 1090 295 259 0 0 chr13 66203713 66203767 -54080545 - B4 SINE B4 -10 282 229 3 1090 377 95 0 16 chr13 66203779 66203843 -54080469 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1090 524 349 18 35 chr13 66203888 66204173 -54080139 - B4A SINE B4 -12 280 1 3 1090 535 330 78 30 chr13 66204175 66204406 -54079906 - B4 SINE B4 -46 246 5 3 1090 3723 15 2 0 chr13 66204838 66205233 -54079079 + MTA_Mm LTR MaLR 1 396 0 3 1090 878 170 13 20 chr13 66205391 66205541 -54078771 + B1_Mur3 SINE Alu 1 149 0 3 1090 699 207 57 0 chr13 66205641 66205781 -54078531 - B1_Mur3 SINE Alu -1 148 1 3 1090 1424 170 175 35 chr13 66206226 66206598 -54077714 + RLTR33 LTR ERVK 1 424 -254 3 1090 22 88 0 0 chr13 66207432 66207489 -54076823 + AT_rich Low_complexity Low_complexity 1 57 0 3 1090 228 254 0 27 chr13 66208592 66208665 -54075647 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 3 1090 219 149 39 51 chr13 66208678 66208756 -54075556 + (CCCTAA)n Simple_repeat Simple_repeat 6 82 0 3 1090 337 278 21 70 chr13 66208795 66208938 -54075374 + MT2A LTR ERVL 74 209 -324 3 1090 21 0 0 0 chr13 66209109 66209130 -54075182 + AT_rich Low_complexity Low_complexity 1 21 0 3 1090 1384 243 65 58 chr13 66210105 66210624 -54073688 - L1_Mur3 LINE L1 -4044 1836 1314 3 1090 205 245 19 47 chr13 66210750 66210857 -54073455 + (TCTCTG)n Simple_repeat Simple_repeat 4 107 0 3 1090 491 250 81 0 chr13 66210946 66211118 -54073194 - L1_Mur3 LINE L1 -6637 1091 906 3 1090 504 0 0 0 chr13 66211130 66211186 -54073126 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 3 1090 1080 117 0 0 chr13 66211186 66211331 -54072981 - B1_Mus2 SINE Alu -2 145 1 3 1090 270 377 76 9 chr13 66211402 66211849 -54072463 - L1_Mur3 LINE L1 -7205 523 47 3 1090 3612 42 0 0 chr13 66212738 66213147 -54071165 + L1Md_T LINE L1 6172 6580 -2 3 1090 204 214 14 41 chr13 66213666 66213739 -54070573 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 3 1090 240 135 39 51 chr13 66213752 66213830 -54070482 + (CCCTAA)n Simple_repeat Simple_repeat 6 82 0 3 1090 250 298 0 35 chr13 66213869 66213956 -54070356 + MT2A LTR ERVL 74 157 -376 3 1090 1438 252 52 52 chr13 66214711 66215234 -54069078 - L1_Mur3 LINE L1 -4044 1836 1314 3 1090 587 336 88 61 chr13 66216877 66217219 -54067093 + MTD LTR MaLR 53 403 -16 3 1090 394 352 70 61 chr13 66217245 66217574 -54066738 + MTD-int LTR MaLR 2 361 -1219 3 1090 6211 203 36 19 chr13 66217621 66218999 -54065313 - Lx4B LINE L1 -6 7052 5651 3 1090 467 200 16 50 chr13 66218972 66219093 -54065219 - Lx4B LINE L1 -606 6452 6336 3 1090 901 164 6 0 chr13 66219142 66219301 -54065011 + MurSatRep1 Unknown Unknown 1 160 -1977 3 1090 26 0 0 0 chr13 66219409 66219435 -54064877 + AT_rich Low_complexity Low_complexity 1 26 0 3 1090 329 362 14 37 chr13 66219710 66219925 -54064387 - B3 SINE B2 -5 211 2 3 1090 8978 195 71 17 chr13 66220021 66221275 -54063037 + MurSatRep1 Unknown Unknown 1 1334 -803 3 1090 192 40 0 0 chr13 66221275 66221300 -54063012 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1090 450 0 0 0 chr13 66221300 66221349 -54062963 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1090 8978 231 70 26 chr13 66221349 66222541 -54061771 + MurSatRep1 Unknown Unknown 1335 2137 0 3 1090 505 255 13 13 chr13 66222232 66223043 -54061269 + MMSAT4 Satellite Satellite 1 811 0 3 1090 518 314 55 36 chr13 66222913 66223297 -54061015 + MurSatRep1 Unknown Unknown 1747 2137 0 3 1090 438 250 22 22 chr13 66223240 66223379 -54060933 + MMSAT4 Satellite Satellite 30 168 0 3 1090 540 295 61 46 chr13 66223333 66223772 -54060540 + MurSatRep1 Unknown Unknown 1747 2137 0 3 1090 249 284 30 17 chr13 66224013 66224213 -54060099 + MMSAT4 Satellite Satellite 1 202 -6 3 1090 2301 145 20 25 chr13 66224796 66225200 -54059112 + RLTR9E LTR ERVK 8 409 0 3 1090 1578 226 8 42 chr13 66225362 66225741 -54058571 + ORR1B1 LTR MaLR 29 394 0 3 1090 4749 201 143 116 chr13 66225741 66226109 -54058203 + ORR1B1-int LTR MaLR 1 451 -1512 3 1090 1020 100 0 14 chr13 66226109 66226251 -54058061 + B1_Mus2 SINE Alu 3 142 -5 3 1090 4749 201 143 116 chr13 66226251 66226325 -54057987 + ORR1B1-int LTR MaLR 452 463 -1500 3 1090 831 10 0 0 chr13 66226325 66226421 -54057891 + (GA)n Simple_repeat Simple_repeat 1 96 0 3 1090 4749 194 141 98 chr13 66226421 66227709 -54056603 + ORR1B1-int LTR MaLR 464 1748 -215 3 1090 814 135 8 0 chr13 66227727 66227853 -54056459 + B1_Mus1 SINE Alu 1 127 -21 3 1090 1678 195 17 73 chr13 66227849 66228457 -54055855 + ORR1B1 LTR MaLR 15 386 -8 3 1090 244 316 46 7 chr13 66229254 66229407 -54054905 + MurSatRep1 Unknown Unknown 1891 2049 -88 3 1090 6912 221 36 55 chr13 66229746 66230439 -54053873 - L1_Mur3 LINE L1 -1568 4312 3613 3 1090 4376 22 0 0 chr13 66230439 66230932 -54053380 - MT2_Mm LTR ERVL 0 493 1 3 1090 6912 221 36 55 chr13 66230932 66232633 -54051679 - L1_Mur3 LINE L1 -2268 3612 1965 3 1090 6530 68 23 38 chr13 66232656 66233241 -54051071 - L1_Mus2 LINE L1 0 6566 6011 3 1090 880 140 28 7 chr13 66233241 66233385 -54050927 - B1_Mus1 SINE Alu -1 147 1 3 1090 9688 103 14 10 chr13 66233385 66235042 -54049270 - L1_Mus2 LINE L1 -556 6010 4340 3 1090 289 258 87 16 chr13 66235042 66235192 -54049120 + MTD LTR MaLR 264 421 0 3 1090 31636 29 2 8 chr13 66235743 66240325 -54043987 - L1Md_A LINE L1 -710 5173 631 3 1090 408 40 0 0 chr13 66240593 66240643 -54043669 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1090 2126 188 51 14 chr13 66241104 66241559 -54042753 - RLTR1 LTR ERV1 0 624 132 3 1090 545 282 60 41 chr13 66242386 66242604 -54041708 + LTRIS4 LTR ERV1 286 507 0 3 1090 294 29 0 0 chr13 66244461 66244496 -54039816 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1090 325 186 44 55 chr13 66244545 66244727 -54039585 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1090 493 234 23 144 chr13 66245557 66245772 -54038540 + B2_Mm2 SINE B2 7 195 0 3 1090 1535 173 9 56 chr13 66246850 66247192 -54037120 + ORR1A3-int LTR MaLR 1189 1514 -449 3 1090 1357 120 13 4 chr13 66247201 66247427 -54036885 - RMER16-int LTR ERVK -3417 1989 1762 3 1090 1643 196 18 3 chr13 66247427 66247755 -54036557 + Lx2B LINE L1 6039 6371 -626 3 1090 2037 130 78 11 chr13 66247765 66248137 -54036175 + Lx2B LINE L1 6599 6995 -5 3 1090 33 0 0 0 chr13 66249020 66249053 -54035259 + AT_rich Low_complexity Low_complexity 1 33 0 3 1090 33847 43 0 4 chr13 66249173 66254427 -54029885 + L1Md_T LINE L1 262 5589 -297 3 1090 8512 30 0 0 chr13 66254427 66255421 -54028891 + L1Md_T LINE L1 5590 6583 -2 3 1090 211 125 0 59 chr13 66255466 66255517 -54028795 + A-rich Low_complexity Low_complexity 2 49 0 3 1090 533 228 0 0 chr13 66255520 66255643 -54028669 - Lx7 LINE L1 -338 7358 7236 3 1090 1503 236 15 17 chr13 66255948 66256357 -54027955 - Lx7 LINE L1 -544 7152 6745 3 1090 21 0 0 0 chr13 66256561 66256582 -54027730 + AT_rich Low_complexity Low_complexity 1 21 0 3 1090 689 325 91 62 chr13 66258409 66258750 -54025562 + MTD LTR MaLR 53 403 -16 3 1090 529 346 46 40 chr13 66258776 66259104 -54025208 + MTD-int LTR MaLR 2 331 -1039 3 1090 5711 213 28 15 chr13 66259152 66260625 -54023687 - Lx4B LINE L1 -6 7052 5644 3 1090 853 169 0 0 chr13 66260674 66260834 -54023478 + MurSatRep1 Unknown Unknown 1 160 -1977 3 1090 330 392 10 0 chr13 66261259 66261453 -54022859 - B3 SINE B2 -19 197 2 3 1090 8290 201 46 28 chr13 66261549 66262007 -54022305 + MurSatRep1 Unknown Unknown 1 470 -1667 3 1090 1283 14 0 0 chr13 66262007 66262153 -54022159 + B1_Mus2 SINE Alu 2 147 0 3 1090 8290 201 46 28 chr13 66262153 66263005 -54021307 + MurSatRep1 Unknown Unknown 471 1344 -793 3 1090 414 0 0 0 chr13 66263005 66263051 -54021261 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1090 8290 233 41 28 chr13 66263051 66264103 -54020209 + MurSatRep1 Unknown Unknown 1345 2136 -1 3 1090 504 259 20 20 chr13 66263871 66264989 -54019323 + MMSAT4 Satellite Satellite 1 1118 0 3 1090 282 276 29 16 chr13 66265228 66265435 -54018877 + MMSAT4 Satellite Satellite 1 209 -6 3 1090 2267 162 20 17 chr13 66266003 66266410 -54017902 + RLTR9E LTR ERVK 2 409 0 3 1090 230 291 10 10 chr13 66266416 66266520 -54017792 + MMSAT4 Satellite Satellite 65 168 0 3 1090 1521 231 7 34 chr13 66266578 66266950 -54017362 + ORR1B1 LTR MaLR 1 393 -1 3 1090 1308 175 251 45 chr13 66266951 66267267 -54017045 + ORR1B1-int LTR MaLR 1 409 -1554 3 1090 1105 102 0 0 chr13 66267267 66267414 -54016898 + B1_Mus2 SINE Alu 1 147 0 3 1090 1308 175 251 45 chr13 66267414 66267479 -54016833 + ORR1B1-int LTR MaLR 410 461 -1502 3 1090 715 140 0 0 chr13 66267483 66267590 -54016722 + B1_Mm SINE Alu 3 109 -38 3 1090 4493 209 81 148 chr13 66267597 66267623 -54016689 + ORR1B1-int LTR MaLR 421 448 -1515 3 1090 1107 109 0 0 chr13 66267623 66267788 -54016524 + (GGGGA)n Simple_repeat Simple_repeat 3 167 0 3 1090 4493 209 81 148 chr13 66267788 66269124 -54015188 + ORR1B1-int LTR MaLR 449 1755 -208 3 1090 925 133 27 20 chr13 66269124 66269270 -54015042 + B1_Mus1 SINE Alu 1 147 -1 3 1090 4493 204 37 115 chr13 66269270 66269906 -54014406 + ORR1B1-int LTR MaLR 1756 1962 -1 3 1090 229 185 0 0 chr13 66270735 66270789 -54013523 + MMSAT4 Satellite Satellite 111 164 -4 3 1090 6799 220 45 49 chr13 66271235 66273578 -54010734 - L1_Mur3 LINE L1 -1582 4298 1965 3 1090 6743 72 5 37 chr13 66273601 66274189 -54010123 - L1_Mus2 LINE L1 -3 6563 6011 3 1090 982 93 7 7 chr13 66274189 66274330 -54009982 - B1_Mus1 SINE Alu -7 141 1 3 1090 6743 83 9 28 chr13 66274330 66274873 -54009439 - L1_Mus2 LINE L1 -556 6010 5458 3 1090 3411 96 49 2 chr13 66274872 66275402 -54008910 - L1_Mus2 LINE L1 -1032 4851 4297 3 1090 21 0 0 0 chr13 66276082 66276103 -54008209 + AT_rich Low_complexity Low_complexity 1 21 0 3 1090 239 248 18 27 chr13 66276148 66276260 -54008052 - Lx9 LINE L1 -48 7596 7486 3 1090 1498 242 33 14 chr13 66276307 66276731 -54007581 + Lx7 LINE L1 6745 7176 -520 4 1090 558 228 0 0 chr13 66277012 66277135 -54007177 + Lx7 LINE L1 7236 7358 -338 4 1090 182 116 0 23 chr13 66277138 66277182 -54007130 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 4 1090 2066 153 78 18 chr13 66278258 66278643 -54005669 - Lx2B LINE L1 -5 6995 6588 4 1090 1775 171 19 6 chr13 66278643 66278967 -54005345 - Lx2B LINE L1 -634 6366 6039 4 1090 1427 129 13 9 chr13 66278967 66279194 -54005118 + RMER16-int LTR ERVK 1762 1989 -3417 4 1090 1593 158 7 20 chr13 66279203 66279500 -54004812 - ORR1A3-int LTR MaLR -449 1514 1222 4 1090 263 254 0 0 chr13 66280436 66280491 -54003821 - RLTR22_Mur LTR ERVK -1792 56 2 4 1090 1197 103 0 0 chr13 66280628 66280803 -54003509 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 4 1090 253 370 7 62 chr13 66280855 66280999 -54003313 - B3 SINE B2 -74 142 7 4 1090 202 248 55 23 chr13 66281761 66281889 -54002423 + (CA)n Simple_repeat Simple_repeat 2 133 0 4 1090 598 283 36 53 chr13 66283928 66284146 -54000166 - LTRIS4 LTR ERV1 0 587 286 4 1090 2084 191 41 18 chr13 66285014 66285474 -53998838 + RLTR1 LTR ERV1 132 624 0 4 1090 241 304 266 23 chr13 66286522 66286650 -53997662 - MIR SINE MIR -75 187 29 4 1090 195 0 56 28 chr13 66286650 66286686 -53997626 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 4 1090 1164 89 7 0 chr13 66286686 66286832 -53997480 - B1_Mm SINE Alu 0 147 1 4 1090 27 0 0 0 chr13 66287066 66287093 -53997219 + AT_rich Low_complexity Low_complexity 1 27 0 4 1090 231 231 29 58 chr13 66287426 66287495 -53996817 - MIRb SINE MIR -183 85 19 4 1090 234 296 0 0 chr13 66287521 66287575 -53996737 - ID4_ SINE ID 0 83 30 4 1090 368 288 103 29 chr13 66287767 66287903 -53996409 - B1_Mur3 SINE Alu 0 149 4 4 1090 2079 92 23 0 chr13 66287903 66288206 -53996106 + MusHAL1 LINE L1 1670 1979 -733 4 1090 14120 170 10 58 chr13 66288200 66290419 -53993893 - L1_Mur2 LINE L1 -1744 4133 2061 4 1090 414 0 0 0 chr13 66290419 66290465 -53993847 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1090 14120 170 10 58 chr13 66290465 66291018 -53993294 - L1_Mur2 LINE L1 -3817 2060 1518 4 1090 2020 119 112 0 chr13 66291018 66291312 -53993000 - ORR1A2 LTR MaLR 0 327 1 4 1090 14120 170 10 58 chr13 66291312 66291395 -53992917 - L1_Mur2 LINE L1 -4360 1517 1432 4 1090 1608 27 0 27 chr13 66291395 66291582 -53992730 - B2_Mm1a SINE B2 -10 183 2 4 1090 14120 159 37 10 chr13 66291582 66292310 -53992002 - L1_Mur2 LINE L1 -4446 1431 672 4 1090 246 219 0 147 chr13 66292636 66292711 -53991601 + MT2B LTR ERVL 152 215 -386 4 1090 416 88 0 0 chr13 66292654 66292711 -53991601 + B1_Mus2 SINE Alu 2 58 -89 4 1090 391 157 0 28 chr13 66292711 66292722 -53991590 + ID_B1 SINE B4 83 148 -76 4 1090 23 0 0 0 chr13 66292878 66292901 -53991411 + AT_rich Low_complexity Low_complexity 1 23 0 4 1090 209 255 0 0 chr13 66293641 66293692 -53990620 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1090 34 24 0 0 chr13 66293692 66293733 -53990579 + AT_rich Low_complexity Low_complexity 1 41 0 4 1090 2147 47 12 4 chr13 66293838 66294095 -53990217 + L1Md_F3 LINE L1 6324 6582 -2 4 1090 1038 128 0 0 chr13 66295376 66295517 -53988795 + B1_Mus1 SINE Alu 3 143 -5 4 1090 25 31 0 0 chr13 66296481 66296513 -53987799 + AT_rich Low_complexity Low_complexity 1 32 0 4 1090 389 95 0 0 chr13 66296634 66296697 -53987615 - Lx2 LINE L1 0 6997 6935 4 1090 906 159 0 12 chr13 66296703 66296868 -53987444 + Lx2 LINE L1 6768 6930 -67 4 1090 26 64 0 0 chr13 66298348 66298395 -53985917 + AT_rich Low_complexity Low_complexity 1 47 0 4 1090 669 317 60 21 chr13 66299601 66299981 -53984331 - Lx9 LINE L1 -48 7596 7202 4 1090 182 182 45 0 chr13 66300020 66300064 -53984248 - L3 LINE CR1 -1918 2571 2526 4 1090 237 139 0 0 chr13 66301032 66301075 -53983237 + (CATA)n Simple_repeat Simple_repeat 4 46 0 4 1090 308 248 43 0 chr13 66301156 66301273 -53983039 + (CA)n Simple_repeat Simple_repeat 1 122 0 4 1090 23 86 0 0 chr13 66301276 66301334 -53982978 + AT_rich Low_complexity Low_complexity 1 58 0 4 1090 495 0 0 0 chr13 66301382 66301437 -53982875 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1090 310 257 108 58 chr13 66301483 66301603 -53982709 + B1_Mur1 SINE Alu 23 148 -1 4 1090 1526 43 32 11 chr13 66302230 66302418 -53981894 + B2_Mm1a SINE B2 2 193 0 4 1090 266 0 0 29 chr13 66302453 66302488 -53981824 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1090 5642 35 0 0 chr13 66302829 66303453 -53980859 + L1Md_T LINE L1 5957 6580 -2 4 1090 393 227 43 55 chr13 66303972 66304135 -53980177 + (CCCTAA)n Simple_repeat Simple_repeat 6 166 0 4 1090 250 298 0 35 chr13 66304174 66304261 -53980051 + MT2A LTR ERVL 74 157 -376 4 1090 1258 260 58 60 chr13 66305003 66305522 -53978790 - L1_Mur3 LINE L1 -4044 1836 1319 4 1090 510 244 81 6 chr13 66305852 66306025 -53978287 - L1_Mur3 LINE L1 -6637 1091 906 4 1090 1059 105 28 0 chr13 66306051 66306194 -53978118 - B1_Mus2 SINE Alu 0 147 1 4 1090 682 321 77 63 chr13 66308316 66308674 -53975638 + MTD LTR MaLR 53 403 -16 4 1090 437 346 56 56 chr13 66308710 66309014 -53975298 + MTD-int LTR MaLR 27 361 -1219 4 1090 2027 230 69 11 chr13 66309055 66309578 -53974734 - Lx4B LINE L1 0 7058 6506 4 1090 243 273 0 0 chr13 66310434 66310489 -53973823 - RLTR22_Mur LTR ERVK -1792 56 2 4 1090 1197 75 0 0 chr13 66310613 66310774 -53973538 + (TTTC)n Simple_repeat Simple_repeat 4 164 0 4 1090 615 157 0 0 chr13 66310776 66310884 -53973428 + CT-rich Low_complexity Low_complexity 2 109 0 4 1090 310 322 4 45 chr13 66310927 66311090 -53973222 - B2_Mm2 SINE B2 -57 159 7 4 1090 21 57 0 0 chr13 66311373 66311408 -53972904 + AT_rich Low_complexity Low_complexity 1 35 0 4 1090 238 132 38 0 chr13 66311944 66311997 -53972315 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1090 606 254 66 58 chr13 66314077 66314303 -53970009 - LTRIS4 LTR ERV1 0 507 280 4 1090 2241 178 40 18 chr13 66315152 66315613 -53968699 + RLTR1 LTR ERV1 132 624 0 4 1090 519 17 0 0 chr13 66316077 66316137 -53968175 + (CA)n Simple_repeat Simple_repeat 1 60 0 4 1090 40189 31 3 7 chr13 66316404 66322154 -53962158 + L1Md_T LINE L1 422 6144 -438 4 1091 293 316 46 7 chr13 66322476 66322629 -53961683 - MurSatRep1 Unknown Unknown -88 2049 1891 4 1091 1613 203 22 72 chr13 66323427 66324033 -53960279 - ORR1B1 LTR MaLR -8 386 15 4 1091 822 127 8 0 chr13 66324029 66324155 -53960157 - B1_Mus1 SINE Alu -21 127 1 4 1091 4155 202 127 135 chr13 66324169 66325504 -53958808 - ORR1B1-int LTR MaLR -215 1748 494 4 1091 726 101 0 0 chr13 66325504 66325613 -53958699 + (TTCC)n Simple_repeat Simple_repeat 3 111 0 4 1091 4155 205 129 163 chr13 66325613 66326119 -53958193 - ORR1B1-int LTR MaLR -1470 493 1 4 1091 1583 223 8 42 chr13 66326119 66326498 -53957814 - ORR1B1 LTR MaLR 0 394 29 4 1091 260 307 7 62 chr13 66326550 66326660 -53957652 - MMSAT4 Satellite Satellite 0 168 59 4 1091 2497 148 22 17 chr13 66326660 66327066 -53957246 - RLTR9E LTR ERVK 0 409 2 4 1091 260 307 7 62 chr13 66327066 66327101 -53957211 - MMSAT4 Satellite Satellite -110 58 31 4 1091 239 371 24 19 chr13 66327210 66327416 -53956896 - MurSatRep1 Unknown Unknown -88 2049 1843 4 1091 293 307 29 21 chr13 66327299 66327439 -53956873 - MMSAT4 Satellite Satellite 0 168 28 4 1091 283 341 45 35 chr13 66327548 66327633 -53956679 - MurSatRep1 Unknown Unknown -88 2049 1894 4 1091 333 296 28 16 chr13 66327633 66327851 -53956461 - MMSAT4 Satellite Satellite 0 220 1 4 1091 283 341 45 35 chr13 66327851 66327930 -53956382 - MurSatRep1 Unknown Unknown -88 1893 1745 4 1091 319 289 26 26 chr13 66328078 66328195 -53956117 - MMSAT4 Satellite Satellite -22 146 30 4 1091 553 314 61 40 chr13 66328135 66328823 -53955489 - MurSatRep1 Unknown Unknown 0 2137 1691 4 1091 500 279 3 3 chr13 66328812 66329035 -53955277 - MMSAT4 Satellite Satellite 0 223 1 4 1091 447 297 72 44 chr13 66329035 66329171 -53955141 - MurSatRep1 Unknown Unknown 0 2135 1843 4 1091 3901 214 78 24 chr13 66329146 66330156 -53954156 - MurSatRep1 Unknown Unknown 0 2137 1073 4 1091 3049 24 0 9 chr13 66330157 66330497 -53953815 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 1091 42142 16 7 3 chr13 66330497 66336920 -53947392 + IAPEz-int LTR ERVK 8 6481 0 4 1091 2863 27 0 9 chr13 66336920 66337260 -53947052 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 1091 3245 170 98 16 chr13 66337260 66337996 -53946316 - MurSatRep1 Unknown Unknown -1060 1077 282 4 1091 272 328 76 0 chr13 66337998 66338117 -53946195 + B1_Mur2 SINE Alu 5 132 -17 4 1091 830 153 0 0 chr13 66338119 66338269 -53946043 - MurSatRep1 Unknown Unknown -1987 150 1 4 1091 472 384 11 5 chr13 66338365 66338551 -53945761 + B3 SINE B2 2 188 -28 4 1091 26 0 0 0 chr13 66338850 66338876 -53945436 + AT_rich Low_complexity Low_complexity 1 26 0 4 1091 839 175 0 0 chr13 66338984 66339144 -53945168 - MurSatRep1 Unknown Unknown -1977 160 1 4 1091 399 209 16 50 chr13 66339193 66339314 -53944998 + Lx4B LINE L1 6336 6452 -606 4 1091 5578 209 34 13 chr13 66339314 66340661 -53943651 + Lx4B LINE L1 5677 7052 -6 4 1091 461 358 49 39 chr13 66340710 66341015 -53943297 - MTD-int LTR MaLR -1039 331 24 4 1091 689 321 77 63 chr13 66341048 66341406 -53942906 - MTD LTR MaLR -16 403 53 4 1091 995 105 28 0 chr13 66343528 66343671 -53940641 + B1_Mus2 SINE Alu 1 147 0 4 1091 455 244 81 6 chr13 66343697 66343870 -53940442 + L1_Mur3 LINE L1 906 1091 -6637 4 1091 1099 266 48 52 chr13 66344200 66344720 -53939592 + L1_Mur3 LINE L1 1319 1836 -4044 4 1091 262 298 0 35 chr13 66345461 66345548 -53938764 - MT2A LTR ERVL -376 157 74 4 1091 397 230 18 68 chr13 66345587 66345750 -53938562 + (TTAGGG)n Simple_repeat Simple_repeat 6 160 0 4 1091 5335 34 0 0 chr13 66346268 66346892 -53937420 - L1Md_T LINE L1 -2 6580 5957 4 1091 311 0 0 25 chr13 66347233 66347273 -53937039 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1091 1468 33 55 0 chr13 66347314 66347496 -53936816 - B2_Mm1t SINE B2 0 193 2 4 1091 308 239 108 58 chr13 66348123 66348243 -53936069 - B1_Mur1 SINE Alu -1 148 23 4 1091 369 0 0 0 chr13 66348289 66348330 -53935982 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1091 23 86 0 0 chr13 66348378 66348436 -53935876 + AT_rich Low_complexity Low_complexity 1 58 0 4 1091 308 248 43 0 chr13 66348439 66348556 -53935756 + (TG)n Simple_repeat Simple_repeat 1 122 0 4 1091 237 139 0 0 chr13 66348637 66348680 -53935632 + (TATG)n Simple_repeat Simple_repeat 4 46 0 4 1091 182 182 45 0 chr13 66349648 66349692 -53934620 + L3 LINE CR1 2526 2571 -1918 4 1091 541 317 60 21 chr13 66349731 66350111 -53934201 + Lx9 LINE L1 7202 7596 -48 4 1091 26 64 0 0 chr13 66351319 66351366 -53932946 + AT_rich Low_complexity Low_complexity 1 47 0 4 1091 859 166 0 12 chr13 66352846 66353011 -53931301 - Lx2 LINE L1 -67 6930 6768 4 1091 360 95 0 0 chr13 66353017 66353080 -53931232 + Lx2 LINE L1 6935 6997 0 4 1091 25 31 0 0 chr13 66353201 66353233 -53931079 + AT_rich Low_complexity Low_complexity 1 32 0 5 1091 976 128 0 0 chr13 66354197 66354338 -53929974 - B1_Mus1 SINE Alu -5 143 3 5 1091 2005 51 12 4 chr13 66355617 66355874 -53928438 - L1Md_F3 LINE L1 -2 6582 6324 5 1091 34 24 0 0 chr13 66355979 66356020 -53928292 + AT_rich Low_complexity Low_complexity 1 41 0 5 1091 225 108 0 0 chr13 66356020 66356057 -53928255 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1091 23 0 0 0 chr13 66356811 66356834 -53927478 + AT_rich Low_complexity Low_complexity 1 23 0 5 1091 369 191 0 14 chr13 66356993 66357062 -53927250 - ID_B1 SINE B4 -78 146 79 5 1091 408 88 0 0 chr13 66357001 66357058 -53927254 - B1_Mus2 SINE Alu -89 58 2 5 1091 242 219 0 147 chr13 66357058 66357076 -53927236 - MT2B LTR ERVL -386 215 152 5 1091 13517 164 35 9 chr13 66357400 66358216 -53926096 + L1_Mur2 LINE L1 672 1517 -4360 5 1091 1825 133 112 0 chr13 66358216 66358510 -53925802 + ORR1A2 LTR MaLR 1 327 0 5 1091 13517 165 14 27 chr13 66358510 66359062 -53925250 + L1_Mur2 LINE L1 1518 2060 -3817 5 1091 213 39 0 0 chr13 66359062 66359088 -53925224 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1091 13517 165 14 27 chr13 66359088 66359955 -53924357 + L1_Mur2 LINE L1 2061 2883 -2994 5 1091 612 62 0 0 chr13 66359955 66360036 -53924276 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 5 1091 13517 165 14 27 chr13 66360036 66361276 -53923036 + L1_Mur2 LINE L1 2884 4132 -1745 5 1091 1882 93 26 0 chr13 66361270 66361572 -53922740 - MusHAL1 LINE L1 -733 1979 1670 5 1091 373 288 103 29 chr13 66361572 66361708 -53922604 + B1_Mur3 SINE Alu 4 149 0 5 1091 236 280 85 31 chr13 66361976 66362105 -53922207 + MIRb SINE MIR 19 154 -114 5 1091 27 0 0 0 chr13 66362378 66362405 -53921907 + AT_rich Low_complexity Low_complexity 1 27 0 5 1091 1071 109 0 0 chr13 66362639 66362786 -53921526 + B1_Mm SINE Alu 1 147 0 5 1091 195 0 56 28 chr13 66362786 66362822 -53921490 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 5 1091 234 329 78 13 chr13 66362822 66362899 -53921413 + MIR SINE MIR 29 110 -152 5 1091 2123 182 42 18 chr13 66363998 66364458 -53919854 - RLTR1 LTR ERV1 0 624 132 5 1091 603 313 62 45 chr13 66365033 66365544 -53918768 + LTRIS4 LTR ERV1 1 587 0 5 1091 21 57 0 0 chr13 66368162 66368197 -53916115 + AT_rich Low_complexity Low_complexity 1 35 0 5 1091 243 328 0 0 chr13 66368481 66368548 -53915764 + B3A SINE B2 7 73 -125 5 1091 1044 24 0 0 chr13 66368677 66368800 -53915512 + (GAAA)n Simple_repeat Simple_repeat 2 124 0 5 1091 257 254 0 0 chr13 66368937 66368992 -53915320 + RLTR22_Mur LTR ERVK 2 56 -1792 5 1091 1507 175 7 14 chr13 66369920 66370215 -53914097 + ORR1A3-int LTR MaLR 1222 1514 -449 5 1091 1320 129 25 8 chr13 66370219 66370454 -53913858 - RMER16-int LTR ERVK -3409 1997 1759 5 1091 1679 176 15 6 chr13 66370454 66370780 -53913532 + Lx2B LINE L1 6042 6370 -630 5 1091 1912 134 80 14 chr13 66370800 66371163 -53913149 + Lx2B LINE L1 6609 6995 -5 5 1091 22 0 0 0 chr13 66371987 66372009 -53912303 + AT_rich Low_complexity Low_complexity 1 22 0 5 1091 210 120 59 20 chr13 66372170 66372221 -53912091 + A-rich Low_complexity Low_complexity 2 54 0 5 1091 554 219 0 0 chr13 66372224 66372347 -53911965 - Lx7 LINE L1 -338 7358 7236 5 1091 1332 242 11 17 chr13 66372652 66373005 -53911307 - Lx7 LINE L1 -544 7152 6802 5 1091 1690 85 25 69 chr13 66373663 66373940 -53910372 + L1_Mus2 LINE L1 6302 6566 0 5 1091 6988 224 35 46 chr13 66373963 66374076 -53910236 + L1_Mur3 LINE L1 1965 2058 -3822 5 1091 321 26 0 0 chr13 66374076 66374114 -53910198 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1091 6988 224 35 46 chr13 66374114 66376374 -53907938 + L1_Mur3 LINE L1 2059 4312 -1568 5 1091 4906 223 104 114 chr13 66377662 66379768 -53904544 - ORR1B1-int LTR MaLR 0 1792 15 5 1091 1148 111 0 6 chr13 66379768 66379949 -53904363 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1091 1013 102 0 14 chr13 66379951 66380091 -53904221 - B1_Mus2 SINE Alu -7 140 3 5 1091 4906 204 137 109 chr13 66380091 66380459 -53903853 - ORR1B1-int LTR MaLR -1512 451 1 5 1091 1303 219 0 111 chr13 66380459 66380829 -53903483 - ORR1B1 LTR MaLR 0 329 1 5 1091 2253 145 27 25 chr13 66380997 66381399 -53902913 - RLTR9E LTR ERVK 0 409 7 5 1091 260 272 34 21 chr13 66381978 66382178 -53902134 - MMSAT4 Satellite Satellite -7 202 1 5 1091 358 300 60 61 chr13 66382289 66382676 -53901636 - MurSatRep1 Unknown Unknown -88 2049 1747 5 1091 431 239 44 44 chr13 66382546 66382937 -53901375 - MMSAT4 Satellite Satellite 0 391 1 5 1091 422 312 36 36 chr13 66382709 66383012 -53901300 - MurSatRep1 Unknown Unknown -88 2049 1747 5 1091 526 255 33 33 chr13 66382966 66383434 -53900878 - MMSAT4 Satellite Satellite 0 468 1 5 1091 6040 196 61 16 chr13 66383468 66383641 -53900671 - MurSatRep1 Unknown Unknown 0 2137 1946 5 1091 369 0 0 0 chr13 66383641 66383682 -53900630 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 1091 6040 196 61 16 chr13 66383682 66384261 -53900051 - MurSatRep1 Unknown Unknown -192 1945 1336 5 1091 279 0 0 0 chr13 66384261 66384292 -53900020 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1091 6040 191 181 15 chr13 66384292 66385274 -53899038 - MurSatRep1 Unknown Unknown -802 1335 168 5 1091 263 330 85 0 chr13 66385274 66385392 -53898920 + B1_Mur2 SINE Alu 5 132 -17 5 1091 1157 174 344 13 chr13 66385392 66385545 -53898767 - MurSatRep1 Unknown Unknown -1970 167 2 5 1091 398 384 19 23 chr13 66385641 66385857 -53898455 + B3 SINE B2 2 216 0 5 1091 226 191 21 0 chr13 66386076 66386123 -53898189 + B1_Mus2 SINE Alu 100 147 0 5 1091 836 175 0 0 chr13 66386259 66386419 -53897893 - MurSatRep1 Unknown Unknown -1977 160 1 5 1091 421 191 11 0 chr13 66386496 66386590 -53897722 + Lx5 LINE L1 6334 6428 -622 5 1091 5412 215 38 22 chr13 66386557 66387943 -53896369 + Lx4B LINE L1 5645 7052 -6 5 1091 490 374 38 17 chr13 66387990 66388318 -53895994 - MTD-int LTR MaLR -1219 361 2 5 1091 607 333 87 59 chr13 66388328 66388685 -53895627 - MTD LTR MaLR 0 419 53 5 1091 1067 124 0 0 chr13 66390809 66390954 -53893358 + B1_Mus2 SINE Alu 1 145 -2 5 1091 180 0 0 0 chr13 66390954 66390974 -53893338 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 5 1091 491 250 81 0 chr13 66390986 66391158 -53893154 + L1_Mur3 LINE L1 906 1091 -6637 5 1091 1250 260 66 56 chr13 66391478 66391996 -53892316 + L1_Mur3 LINE L1 1314 1836 -4044 5 1091 21 0 0 0 chr13 66392971 66392992 -53891320 + AT_rich Low_complexity Low_complexity 1 21 0 5 1091 319 286 21 70 chr13 66393163 66393306 -53891006 - MT2A LTR ERVL -324 209 74 5 1091 194 137 59 0 chr13 66393373 66393424 -53890888 + (TTAGGG)n Simple_repeat Simple_repeat 5 58 0 5 1091 219 268 0 27 chr13 66393436 66393509 -53890803 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 5 1091 22 88 0 0 chr13 66394613 66394670 -53889642 + AT_rich Low_complexity Low_complexity 1 57 0 5 1091 21 0 0 0 chr13 66394739 66394760 -53889552 + AT_rich Low_complexity Low_complexity 1 21 0 5 1091 1467 168 175 34 chr13 66395496 66395878 -53888434 - RLTR33 LTR ERVK -242 436 1 5 1091 3743 15 2 0 chr13 66396200 66396595 -53887717 + MTA_Mm LTR MaLR 1 396 0 5 1091 9651 34 8 1 chr13 66396595 66397685 -53886627 + MTA_Mm-int LTR MaLR 1 1098 0 5 1091 3757 13 2 0 chr13 66397685 66398080 -53886232 + MTA_Mm LTR MaLR 1 396 0 5 1091 739 200 57 0 chr13 66398206 66398346 -53885966 + B1_Mur3 SINE Alu 1 148 -1 5 1091 899 176 13 13 chr13 66398446 66398596 -53885716 - B1_Mur4 SINE Alu 0 150 1 5 1091 496 348 81 19 chr13 66399168 66399379 -53884933 + B4 SINE B4 1 224 -68 5 1091 509 349 18 35 chr13 66399401 66399686 -53884626 + B4A SINE B4 1 280 -12 5 1091 647 46 0 11 chr13 66399731 66399819 -53884493 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 1091 275 267 17 0 chr13 66399824 66399884 -53884428 + B4 SINE B4 222 282 -10 5 1091 372 320 97 45 chr13 66400060 66400368 -53883944 - ORR1E LTR MaLR -17 342 19 5 1091 197 65 0 31 chr13 66401344 66401376 -53882936 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 5 1091 586 244 70 8 chr13 66401376 66401504 -53882808 - B1_Mur2 SINE Alu -13 136 1 5 1091 405 185 11 11 chr13 66401524 66401617 -53882695 - Lx2B LINE L1 0 7000 6908 5 1091 1233 187 13 13 chr13 66401790 66402023 -53882289 + MTC LTR MaLR 181 413 -8 5 1091 850 146 28 35 chr13 66402042 66402184 -53882128 - B1_Mur4 SINE Alu -5 145 5 5 1091 326 293 30 91 chr13 66402184 66402199 -53882113 - B4A SINE B4 -60 186 78 5 1091 329 301 146 0 chr13 66402217 66402320 -53881992 - RSINE1 SINE B4 -33 132 15 5 1091 2310 197 77 6 chr13 66402442 66402923 -53881389 + RLTR11A2 LTR ERVK 1 515 -12 5 1091 1136 161 131 0 chr13 66403105 66403304 -53881008 - URR1A DNA MER1_type -1 225 1 5 1091 346 172 0 15 chr13 66403304 66403369 -53880943 + RLTR18B LTR ERVK 38 101 -411 5 1091 2452 168 71 76 chr13 66403373 66403508 -53880804 - RLTR18-int LTR ERVK -850 4511 4373 5 1091 754 175 265 0 chr13 66403508 66403674 -53880638 + B3 SINE B2 2 211 -5 5 1091 2452 174 160 46 chr13 66403674 66404447 -53879865 - RLTR18-int LTR ERVK -989 4372 3516 5 1091 901 159 21 0 chr13 66404447 66404592 -53879720 + B1_Mur4 SINE Alu 3 150 0 5 1091 1237 71 0 17 chr13 66404604 66404776 -53879536 + B2_Mm2 SINE B2 2 170 -25 5 1091 3390 174 28 24 chr13 66404813 66405450 -53878862 - RLTR18-int LTR ERVK -1830 3531 2892 5 1091 734 81 0 0 chr13 66405450 66405549 -53878763 - MTB_Mm LTR MaLR -4 322 224 5 1091 919 113 6 44 chr13 66405953 66405989 -53878323 - MTB_Mm LTR MaLR -255 152 116 5 1091 2458 155 5 24 chr13 66405989 66406406 -53877906 + RLTR9E LTR ERVK 1 409 0 5 1091 919 113 6 44 chr13 66406406 66406527 -53877785 - MTB_Mm LTR MaLR -292 115 1 5 1091 21 0 0 0 chr13 66406556 66406577 -53877735 + AT_rich Low_complexity Low_complexity 1 21 0 5 1091 373 255 66 38 chr13 66406634 66406740 -53877572 - PB1D10 SINE Alu -5 112 4 5 1091 749 187 0 6 chr13 66406784 66406924 -53877388 + CT-rich Low_complexity Low_complexity 33 171 0 5 1091 1192 82 0 0 chr13 66406924 66407071 -53877241 - B1_Mus2 SINE Alu 0 147 1 5 1091 749 187 0 6 chr13 66407071 66407102 -53877210 + polypyrimidine Low_complexity Low_complexity 2 32 0 5 1091 4592 92 24 5 chr13 66407250 66407870 -53876442 + L1_Mus4 LINE L1 6005 6636 0 5 1091 458 348 33 14 chr13 66408691 66408904 -53875408 - RMER15 LTR ERVL -101 474 258 5 1091 1205 68 0 7 chr13 66408927 66409074 -53875238 + B1_Mm SINE Alu 2 147 0 5 1091 29 0 0 0 chr13 66409074 66409103 -53875209 + AT_rich Low_complexity Low_complexity 1 29 0 5 1091 999 198 23 16 chr13 66409576 66410025 -53874287 - MMSAT4 Satellite Satellite -22 451 1 5 1091 776 137 17 0 chr13 66410467 66410584 -53873728 + PB1D9 SINE Alu 2 120 0 5 1091 251 100 60 0 chr13 66412019 66412069 -53872243 + (CCCTAA)n Simple_repeat Simple_repeat 6 58 0 5 1091 311 325 32 74 chr13 66412153 66412369 -53871943 + MT2A LTR ERVL 75 281 -252 5 1091 1224 239 37 115 chr13 66413497 66414063 -53870249 - L1_Mur3 LINE L1 -4045 1835 1314 5 1091 492 256 40 18 chr13 66414381 66414608 -53869704 - L1_Mur3 LINE L1 -6637 1091 860 5 1091 227 320 121 28 chr13 66414641 66414856 -53869456 - L1_Mur3 LINE L1 -7446 282 48 5 1091 1089 167 29 10 chr13 66415183 66415389 -53868923 - Lx4B LINE L1 -159 6899 6690 6 1091 238 35 0 0 chr13 66415410 66415439 -53868873 - Lx4B LINE L1 -677 6381 6353 6 1091 21 0 0 0 chr13 66415592 66415613 -53868699 + AT_rich Low_complexity Low_complexity 1 21 0 6 1091 225 224 19 0 chr13 66415617 66415683 -53868629 - B1_Mus2 SINE Alu 0 149 83 6 1091 4850 199 40 28 chr13 66416187 66417263 -53867049 + MurSatRep1 Unknown Unknown 1 1089 -1048 6 1091 790 63 0 297 chr13 66417263 66417465 -53866847 + B1_Mus1 SINE Alu 2 143 -5 6 1091 497 94 12 0 chr13 66417465 66417550 -53866762 + (GAAA)n Simple_repeat Simple_repeat 1 86 0 6 1091 4229 204 38 62 chr13 66417550 66418423 -53865889 + MurSatRep1 Unknown Unknown 1074 1928 -209 6 1091 1011 107 57 0 chr13 66418423 66418563 -53865749 + B1_Mus1 SINE Alu 1 148 0 6 1091 4229 269 33 47 chr13 66418563 66418951 -53865361 + MurSatRep1 Unknown Unknown 1830 2136 -1 6 1091 341 294 26 17 chr13 66418825 66419111 -53865201 + MMSAT4 Satellite Satellite 1 288 0 6 1091 498 323 50 47 chr13 66419073 66419336 -53864976 + MurSatRep1 Unknown Unknown 1755 2082 -50 6 1091 341 261 48 48 chr13 66419336 66419461 -53864851 + MMSAT4 Satellite Satellite 44 168 0 6 1091 498 323 50 47 chr13 66419461 66419499 -53864813 + MurSatRep1 Unknown Unknown 2083 2131 -1 6 1091 314 336 4 0 chr13 66419499 66419708 -53864604 + MMSAT4 Satellite Satellite 1 209 -18 6 1091 345 240 55 91 chr13 66420645 66420755 -53863557 + B4 SINE B4 84 189 -103 6 1091 194 0 0 37 chr13 66420855 66420882 -53863430 + (TAA)n Simple_repeat Simple_repeat 2 27 0 6 1091 752 209 52 157 chr13 66421517 66421784 -53862528 - RLTR5_Mm LTR ERV1 0 628 349 6 1091 365 244 16 108 chr13 66421870 66421999 -53862313 - RLTR6_Mm LTR ERV1 -537 117 1 6 1091 586 288 30 42 chr13 66422446 66422678 -53861634 + LTRIS4 LTR ERV1 270 587 0 6 1091 4498 100 7 2 chr13 66423403 66423983 -53860329 + LTRIS_Mus LTR ERV1 5 587 0 6 1091 1164 66 0 0 chr13 66424891 66425027 -53859285 + B1_Mus2 SINE Alu 2 137 -10 6 1091 279 0 0 0 chr13 66425027 66425058 -53859254 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 6 1091 235 311 38 63 chr13 66425165 66425244 -53859068 - LTR50 LTR ERVL -611 184 108 6 1091 255 250 48 0 chr13 66425550 66425654 -53858658 + (TG)n Simple_repeat Simple_repeat 1 109 0 6 1091 347 120 45 18 chr13 66425689 66425799 -53858513 + (TG)n Simple_repeat Simple_repeat 1 113 0 6 1091 207 194 63 21 chr13 66425854 66425949 -53858363 + (TG)n Simple_repeat Simple_repeat 1 99 0 6 1091 28 29 0 0 chr13 66426313 66426348 -53857964 + AT_rich Low_complexity Low_complexity 1 35 0 6 1091 350 291 24 155 chr13 66426636 66426843 -53857469 + B2_Mm1a SINE B2 11 190 -3 6 1091 789 146 33 30 chr13 66426843 66427278 -53857034 + GA-rich Low_complexity Low_complexity 1 436 0 6 1091 297 128 0 0 chr13 66427268 66427315 -53856997 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 6 1091 894 106 0 0 chr13 66427315 66427447 -53856865 + (GAAA)n Simple_repeat Simple_repeat 1 132 0 6 1091 1579 203 37 6 chr13 66428513 66428865 -53855447 + ORR1A3-int LTR MaLR 1152 1514 -449 6 1091 1467 120 13 18 chr13 66428874 66429103 -53855209 - RMER16-int LTR ERVK -3417 1989 1762 6 1091 1914 173 15 3 chr13 66429103 66429433 -53854879 + Lx2B LINE L1 6039 6372 -625 6 1091 1983 160 78 11 chr13 66429442 66429814 -53854498 + Lx2B LINE L1 6599 6995 -5 6 1091 22 0 0 0 chr13 66430683 66430705 -53853607 + AT_rich Low_complexity Low_complexity 1 22 0 6 1091 21 36 0 0 chr13 66430803 66430831 -53853481 + AT_rich Low_complexity Low_complexity 1 28 0 6 1091 215 31 31 0 chr13 66430863 66430895 -53853417 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1091 593 184 18 0 chr13 66430931 66431040 -53853272 - Lx7 LINE L1 -350 7346 7236 6 1091 1385 268 46 15 chr13 66431298 66431692 -53852620 - Lx7 LINE L1 -485 7211 6806 6 1091 319 256 0 0 chr13 66432375 66432457 -53851855 - Lx7 LINE L1 -880 6816 6735 6 1091 22 0 0 0 chr13 66432652 66432674 -53851638 + AT_rich Low_complexity Low_complexity 1 22 0 6 1091 325 205 92 9 chr13 66433247 66433355 -53850957 - ORR1A4 LTR MaLR -15 404 298 6 1091 10264 101 6 2 chr13 66433355 66434798 -53849514 + L1_Mm LINE L1 4300 5747 -136 6 1091 347 303 46 7 chr13 66434897 66435050 -53849262 - MurSatRep1 Unknown Unknown -88 2049 1891 6 1091 1643 196 0 56 chr13 66435809 66436149 -53848163 - ORR1A4 LTR MaLR -8 321 1 6 1091 5745 198 116 145 chr13 66436149 66436425 -53847887 - ORR1A4-int LTR MaLR 0 1963 1757 6 1091 1123 116 7 0 chr13 66436425 66436572 -53847740 - B1_Mus1 SINE Alu 0 148 1 6 1091 5745 198 116 145 chr13 66436572 66437949 -53846363 - ORR1A4-int LTR MaLR -207 1756 452 6 1091 1113 100 0 0 chr13 66437949 66438089 -53846223 - B1_Mm SINE Alu -6 141 2 6 1091 5745 198 116 145 chr13 66438089 66438456 -53845856 - ORR1A4-int LTR MaLR -1512 451 1 6 1091 1447 242 5 45 chr13 66438456 66438837 -53845475 - ORR1A4 LTR MaLR 0 394 29 6 1091 2620 140 7 24 chr13 66438993 66439409 -53844903 - RLTR9E LTR ERVK 0 409 1 6 1091 280 352 59 21 chr13 66439472 66439710 -53844602 - MurSatRep1 Unknown Unknown -1 2136 1890 6 1091 263 328 34 29 chr13 66439885 66440089 -53844223 - MurSatRep1 Unknown Unknown -88 2049 1845 6 1091 293 301 37 25 chr13 66439975 66440181 -53844131 - MMSAT4 Satellite Satellite 0 208 1 6 1091 537 276 7 7 chr13 66440418 66440630 -53843682 - MMSAT4 Satellite Satellite -22 212 1 6 1091 603 303 65 47 chr13 66440562 66440946 -53843366 - MurSatRep1 Unknown Unknown 0 2137 1747 6 1091 556 254 9 9 chr13 66440816 66441218 -53843094 - MMSAT4 Satellite Satellite 0 402 1 6 1091 541 287 63 32 chr13 66441150 66441434 -53842878 - MurSatRep1 Unknown Unknown 0 2137 1845 6 1091 503 249 23 20 chr13 66441320 66441626 -53842686 - MMSAT4 Satellite Satellite 0 306 1 6 1091 511 301 66 38 chr13 66441569 66441856 -53842456 - MurSatRep1 Unknown Unknown 0 2137 1843 6 1091 393 313 0 0 chr13 66441739 66441870 -53842442 - MMSAT4 Satellite Satellite 0 168 38 6 1091 6395 208 44 33 chr13 66441905 66441996 -53842316 - MurSatRep1 Unknown Unknown 0 2137 2064 6 1091 3156 47 0 0 chr13 66441996 66442356 -53841956 + L1Md_T LINE L1 6223 6582 0 6 1091 6395 208 44 33 chr13 66442356 66442480 -53841832 - MurSatRep1 Unknown Unknown -74 2063 1945 6 1091 441 0 0 0 chr13 66442480 66442529 -53841783 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 1091 6395 208 44 33 chr13 66442529 66443120 -53841192 - MurSatRep1 Unknown Unknown -193 1944 1336 6 1091 459 0 0 0 chr13 66443120 66443171 -53841141 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1091 6395 207 83 26 chr13 66443171 66444419 -53839893 - MurSatRep1 Unknown Unknown -802 1335 1 6 1091 448 367 23 28 chr13 66444515 66444731 -53839581 + B3 SINE B2 2 216 0 6 1091 226 191 21 0 chr13 66444950 66444997 -53839315 + B1_Mus2 SINE Alu 100 147 0 6 1091 860 169 0 0 chr13 66445134 66445294 -53839018 - MurSatRep1 Unknown Unknown -1977 160 1 6 1091 394 209 16 57 chr13 66445343 66445465 -53838847 + Lx5 LINE L1 6334 6452 -606 6 1091 5611 207 32 16 chr13 66445465 66446819 -53837493 + Lx4B LINE L1 5677 7052 -6 6 1091 429 344 103 15 chr13 66446866 66447197 -53837115 - MTD-int LTR MaLR -1219 361 2 6 1091 666 334 90 67 chr13 66447222 66447565 -53836747 - MTD LTR MaLR -16 403 53 6 1091 987 92 35 0 chr13 66449688 66449830 -53834482 + B1_Mus2 SINE Alu 1 147 0 6 1091 272 298 0 35 chr13 66450634 66450721 -53833591 - MT2A LTR ERVL -376 157 74 6 1091 233 194 37 55 chr13 66450759 66450923 -53833389 + (TTAGGG)n Simple_repeat Simple_repeat 6 166 0 6 1091 35 71 0 0 chr13 66452005 66452075 -53832237 + AT_rich Low_complexity Low_complexity 1 70 0 6 1091 21 0 0 0 chr13 66452143 66452164 -53832148 + AT_rich Low_complexity Low_complexity 1 21 0 6 1091 23 68 0 0 chr13 66452546 66452590 -53831722 + AT_rich Low_complexity Low_complexity 1 44 0 6 1092 836 178 0 12 chr13 66454073 66454238 -53830074 - Lx2 LINE L1 -67 6930 6768 6 1092 360 95 0 0 chr13 66454244 66454307 -53830005 + Lx2 LINE L1 6935 6997 0 6 1092 25 31 0 0 chr13 66454428 66454460 -53829852 + AT_rich Low_complexity Low_complexity 1 32 0 6 1092 1068 108 0 0 chr13 66455445 66455593 -53828719 - B1_Mus1 SINE Alu 0 148 1 6 1092 1998 47 8 4 chr13 66456870 66457128 -53827184 - L1Md_F3 LINE L1 -2 6582 6324 6 1092 34 24 0 0 chr13 66457225 66457266 -53827046 + AT_rich Low_complexity Low_complexity 1 41 0 6 1092 224 213 0 0 chr13 66457268 66457315 -53826997 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1092 23 0 0 0 chr13 66458055 66458078 -53826234 + AT_rich Low_complexity Low_complexity 1 23 0 6 1092 387 157 0 28 chr13 66458234 66458306 -53826006 - ID_B1 SINE B4 -76 148 79 6 1092 408 88 0 0 chr13 66458245 66458302 -53826010 - B1_Mus2 SINE Alu -89 58 2 6 1092 242 219 0 147 chr13 66458302 66458320 -53825992 - MT2B LTR ERVL -386 215 152 6 1092 12547 157 35 18 chr13 66458646 66459462 -53824850 + L1_Mur2 LINE L1 672 1517 -4360 6 1092 1876 122 112 0 chr13 66459462 66459756 -53824556 + ORR1A2 LTR MaLR 1 327 0 6 1092 12547 167 14 71 chr13 66459756 66462556 -53821756 + L1_Mur2 LINE L1 1518 4133 -1744 6 1092 1937 86 23 3 chr13 66462550 66462854 -53821458 - MusHAL1 LINE L1 -733 1979 1670 6 1092 373 288 103 29 chr13 66462854 66462990 -53821322 + B1_Mur3 SINE Alu 4 149 0 6 1092 223 246 29 58 chr13 66463262 66463331 -53820981 + MIRb SINE MIR 19 85 -183 6 1092 1093 89 7 0 chr13 66463924 66464070 -53820242 + B1_Mm SINE Alu 1 147 0 6 1092 258 301 248 29 chr13 66464097 66464234 -53820078 + MIRb SINE MIR 25 191 -77 6 1092 2133 182 41 20 chr13 66465287 66465748 -53818564 - RLTR1 LTR ERV1 0 624 132 6 1092 608 267 46 40 chr13 66466567 66466794 -53817518 + LTRIS4 LTR ERV1 280 587 0 6 1092 21 57 0 0 chr13 66469414 66469449 -53814863 + AT_rich Low_complexity Low_complexity 1 35 0 6 1092 243 328 0 0 chr13 66469733 66469800 -53814512 + B3A SINE B2 7 73 -125 6 1092 1113 100 0 0 chr13 66469929 66470160 -53814152 + (GAAA)n Simple_repeat Simple_repeat 1 231 0 6 1092 257 254 0 0 chr13 66470309 66470364 -53813948 + RLTR22_Mur LTR ERVK 2 56 -1792 6 1092 1549 165 7 17 chr13 66471291 66471587 -53812725 + ORR1A3-int LTR MaLR 1222 1514 -449 6 1092 1297 118 14 9 chr13 66471596 66471819 -53812493 - RMER16-int LTR ERVK -3417 1989 1766 6 1092 1833 154 15 6 chr13 66471822 66472154 -53812158 + Lx2B LINE L1 6038 6372 -628 6 1092 1899 142 84 11 chr13 66472162 66472532 -53811780 + Lx2B LINE L1 6599 6995 -5 6 1092 202 158 0 26 chr13 66473336 66473375 -53810937 + (TTA)n Simple_repeat Simple_repeat 3 40 0 6 1092 210 120 59 20 chr13 66473542 66473593 -53810719 + A-rich Low_complexity Low_complexity 2 54 0 6 1092 575 211 0 0 chr13 66473596 66473719 -53810593 - Lx7 LINE L1 -338 7358 7236 6 1092 1337 236 11 17 chr13 66474022 66474371 -53809941 - Lx7 LINE L1 -544 7152 6806 6 1092 255 225 14 14 chr13 66475051 66475123 -53809189 - Lx7 LINE L1 -880 6816 6745 6 1092 21 0 0 0 chr13 66475327 66475348 -53808964 + AT_rich Low_complexity Low_complexity 1 21 0 6 1092 8052 134 24 41 chr13 66475362 66477587 -53806725 - RLTR45-int LTR ERVK -2 7242 5065 6 1092 3661 88 32 30 chr13 66477580 66478181 -53806131 - RLTR45-int LTR ERVK -3258 3986 3385 6 1092 11154 38 51 7 chr13 66478162 66479966 -53804346 - RLTR45-int LTR ERVK -4032 3212 1329 6 1092 1082 51 0 0 chr13 66480777 66480915 -53803397 - RLTR45-int LTR ERVK -6426 818 681 6 1092 4055 71 110 20 chr13 66481215 66481850 -53802462 - RLTR45-int LTR ERVK -6552 692 1 6 1092 3497 77 30 2 chr13 66481850 66482319 -53801993 - RLTR45 LTR ERVK 0 482 1 6 1092 276 210 114 3 chr13 66482883 66482991 -53801321 - MTD LTR MaLR 0 421 298 6 1092 5091 105 0 3 chr13 66482997 66483780 -53800532 + L1_Mm LINE L1 4304 5084 -799 7 1092 772 194 112 90 chr13 66483780 66484236 -53800076 + RLTR6_Mm LTR ERV1 1 589 -65 7 1092 534 58 5 0 chr13 66484294 66484412 -53799900 + MMVL30-int LTR ERV1 60 150 -7406 7 1092 231 118 0 0 chr13 66484412 66484446 -53799866 + tRNA-Arg-AGG tRNA tRNA 43 76 0 7 1092 1454 103 0 33 chr13 66484446 66484688 -53799624 + MMVL30-int LTR ERV1 185 418 -7138 7 1092 345 189 118 40 chr13 66484692 66484844 -53799468 + MMVL30-int LTR ERV1 280 533 -7023 7 1092 5259 50 3 7 chr13 66485192 66485877 -53798435 + MMVL30-int LTR ERV1 772 1453 -2245 7 1092 18029 47 9 19 chr13 66485964 66488437 -53795875 + MMVL30-int LTR ERV1 960 3698 0 7 1092 703 198 119 95 chr13 66488437 66488909 -53795403 + RLTR6_Mm LTR ERV1 1 606 -48 7 1092 6533 93 21 19 chr13 66488909 66489803 -53794509 + L1_Mus2 LINE L1 5105 6010 -556 7 1092 1007 112 0 7 chr13 66489803 66489947 -53794365 + B1_Mus1 SINE Alu 1 143 -5 7 1092 6533 70 22 36 chr13 66489947 66490528 -53793784 + L1_Mus2 LINE L1 6011 6566 0 7 1092 7148 222 35 45 chr13 66490552 66490665 -53793647 + L1_Mur3 LINE L1 1965 2058 -3822 7 1092 558 0 0 0 chr13 66490665 66490727 -53793585 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 1092 7148 222 35 45 chr13 66490727 66492984 -53791328 + L1_Mur3 LINE L1 2059 4312 -1568 7 1092 227 316 46 7 chr13 66493323 66493476 -53790836 - MurSatRep1 Unknown Unknown -88 2049 1891 7 1092 1630 213 19 67 chr13 66494273 66494881 -53789431 - ORR1B1 LTR MaLR -8 386 15 7 1092 814 135 8 0 chr13 66494877 66495003 -53789309 - B1_Mus1 SINE Alu -21 127 1 7 1092 2212 242 73 47 chr13 66495017 66496323 -53787989 - ORR1B1-int LTR MaLR -215 1748 464 7 1092 921 145 6 11 chr13 66496333 66496514 -53787798 + CT-rich Low_complexity Low_complexity 1 180 0 7 1092 1016 125 0 0 chr13 66496526 66496670 -53787642 - B1_Mus2 SINE Alu -1 146 3 7 1092 1423 162 272 3 chr13 66496674 66497038 -53787274 - ORR1B1-int LTR MaLR -1501 462 1 7 1092 1542 227 11 40 chr13 66497038 66497410 -53786902 - ORR1B1 LTR MaLR 0 394 1 7 1092 2173 168 19 24 chr13 66497578 66497988 -53786324 - RLTR9E LTR ERVK 0 409 2 7 1092 486 359 41 29 chr13 66498464 66498793 -53785519 - ORR1B1-int LTR MaLR -1220 360 2 7 1092 691 335 80 53 chr13 66498803 66499160 -53785152 - ORR1B1 LTR MaLR -16 403 53 7 1092 268 374 76 9 chr13 66500766 66501214 -53783098 + L1_Mur3 LINE L1 47 524 -7204 1 1092 1029 138 0 0 chr13 66501285 66501430 -53782882 + B1_Mus2 SINE Alu 1 145 -2 2 1092 195 42 0 0 chr13 66501430 66501454 -53782858 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1092 513 226 88 12 chr13 66501470 66501640 -53782672 + L1_Mur3 LINE L1 909 1091 -6637 1 1092 209 252 27 45 chr13 66501730 66501842 -53782470 + (CAGAGA)n Simple_repeat Simple_repeat 4 113 0 4 1092 1392 251 58 46 chr13 66501969 66502486 -53781826 + L1_Mur3 LINE L1 1314 1836 -4044 1 1092 281 332 38 83 chr13 66503557 66503797 -53780515 - MT2A LTR ERVL -231 302 74 5 1092 431 207 39 58 chr13 66503836 66503990 -53780322 + (TTAGGG)n Simple_repeat Simple_repeat 4 154 0 6 1092 21 0 0 0 chr13 66505222 66505243 -53779069 + AT_rich Low_complexity Low_complexity 1 21 0 7 1092 1586 142 170 43 chr13 66505988 66506364 -53777948 - RLTR33 LTR ERVK -254 424 1 8 1092 717 209 58 0 chr13 66506805 66506944 -53777368 + B1_Mur3 SINE Alu 1 147 -2 9 1092 859 161 14 34 chr13 66507045 66507193 -53777119 - B1_Mur4 SINE Alu -5 145 1 1 1092 699 161 9 32 chr13 66507580 66507740 -53776572 + RLTR9C LTR ERVK 256 409 0 1 1092 893 91 0 0 chr13 66507740 66507861 -53776451 - MTB_Mm LTR MaLR -286 121 1 1 1092 358 265 66 38 chr13 66507962 66508068 -53776244 - PB1D10 SINE Alu -5 112 4 1 1092 1028 141 0 6 chr13 66508114 66508292 -53776020 + (TTC)n Simple_repeat Simple_repeat 1 177 0 1 1092 2331 84 0 0 chr13 66508408 66508717 -53775595 + L1_Mus4 LINE L1 6005 6313 -323 1 1092 251 100 60 0 chr13 66509770 66509820 -53774492 + (CCCTAA)n Simple_repeat Simple_repeat 6 58 0 1 1092 286 330 29 82 chr13 66509904 66510148 -53774164 + MT2A LTR ERVL 75 305 -228 1 1092 1288 244 61 37 chr13 66511243 66511753 -53772559 - L1_Mur3 LINE L1 -4045 1835 1314 1 1092 479 260 44 18 chr13 66512070 66512297 -53772015 - L1_Mur3 LINE L1 -6636 1092 860 1 1092 1145 173 9 9 chr13 66512871 66513081 -53771231 - Lx4B LINE L1 -159 6899 6690 1 1092 596 139 0 0 chr13 66513161 66513247 -53771065 + RLTR1B LTR ERV1 325 410 -102 2 1092 1038 133 13 0 chr13 66513259 66513417 -53770895 + RLTR1B LTR ERV1 353 512 0 2 1092 264 204 0 0 chr13 66513423 66513477 -53770835 + MMSAT4 Satellite Satellite 115 168 0 2 1092 257 350 49 35 chr13 66513443 66513515 -53770797 + MurSatRep1 Unknown Unknown 1759 2044 -88 2 1092 307 342 0 0 chr13 66513515 66513725 -53770587 + MMSAT4 Satellite Satellite 1 210 0 2 1092 1013 188 162 38 chr13 66513989 66514279 -53770033 - IAPEY3_LTR LTR ERVK -4 386 1 2 1092 319 278 9 93 chr13 66514961 66515068 -53769244 + B4 SINE B4 92 189 -103 2 1092 27 0 0 0 chr13 66515165 66515192 -53769120 + AT_rich Low_complexity Low_complexity 1 27 0 2 1092 661 282 50 54 chr13 66516232 66516472 -53767840 + LTRIS4 LTR ERV1 269 507 0 2 1092 402 21 0 0 chr13 66518558 66518605 -53765707 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1092 221 207 68 17 chr13 66518631 66518749 -53765563 + (TG)n Simple_repeat Simple_repeat 1 124 0 2 1092 366 23 0 0 chr13 66518804 66518847 -53765465 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1092 451 250 23 144 chr13 66519610 66519825 -53764487 + B2_Mm2 SINE B2 7 195 0 3 1092 617 250 13 7 chr13 66520636 66520789 -53763523 - Lx7 LINE L1 -808 6888 6735 3 1092 21 0 0 0 chr13 66520982 66521003 -53763309 + AT_rich Low_complexity Low_complexity 1 21 0 3 1092 3853 98 7 7 chr13 66521673 66522236 -53762076 + L1_Mus2 LINE L1 4289 4851 -1032 3 1092 7315 67 14 31 chr13 66522235 66522784 -53761528 + L1_Mus2 LINE L1 5458 6010 -556 3 1092 1076 86 7 7 chr13 66522784 66522924 -53761388 + B1_Mus1 SINE Alu 1 140 -8 3 1092 7315 58 15 41 chr13 66522924 66523506 -53760806 + L1_Mus2 LINE L1 6011 6563 -3 3 1092 7979 218 43 46 chr13 66523532 66523638 -53760674 + L1_Mur3 LINE L1 1965 2057 -3823 3 1092 477 0 0 0 chr13 66523638 66523691 -53760621 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1092 7979 218 43 46 chr13 66523691 66525939 -53758373 + L1_Mur3 LINE L1 2058 4312 -1568 3 1092 1651 191 6 78 chr13 66527222 66527568 -53756744 - ORR1A4 LTR MaLR -8 321 1 3 1092 5936 199 119 130 chr13 66527568 66527856 -53756456 - ORR1A4-int LTR MaLR 0 1963 1757 3 1092 1138 109 0 20 chr13 66527856 66528006 -53756306 - B1_Mus1 SINE Alu -1 147 1 3 1092 5936 199 119 130 chr13 66528006 66529331 -53754981 - ORR1A4-int LTR MaLR -207 1756 464 3 1092 1123 53 11 23 chr13 66529331 66529506 -53754806 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 3 1092 1076 97 0 0 chr13 66529506 66529640 -53754672 - B1_Mm SINE Alu -12 135 2 4 1092 5936 199 119 130 chr13 66529640 66530007 -53754305 - ORR1A4-int LTR MaLR -1500 463 2 3 1092 1419 239 16 43 chr13 66530007 66530383 -53753929 - ORR1A4 LTR MaLR 0 394 29 3 1092 240 309 32 11 chr13 66530384 66530479 -53753833 - MurSatRep1 Unknown Unknown -209 1928 1832 4 1092 279 303 9 9 chr13 66530434 66530544 -53753768 - MMSAT4 Satellite Satellite 0 168 59 4 1092 2496 154 17 15 chr13 66530544 66530952 -53753360 - RLTR9E LTR ERVK 0 409 1 4 1092 256 331 15 8 chr13 66531100 66531234 -53753078 - MMSAT4 Satellite Satellite 0 168 34 4 1092 285 292 30 17 chr13 66531517 66531724 -53752588 - MMSAT4 Satellite Satellite 0 209 1 4 1092 665 302 60 48 chr13 66531963 66532020 -53752292 - MurSatRep1 Unknown Unknown 0 2137 2103 4 1092 473 251 25 25 chr13 66532020 66532243 -53752069 - MMSAT4 Satellite Satellite 0 223 1 4 1092 665 302 60 48 chr13 66532243 66532821 -53751491 - MurSatRep1 Unknown Unknown 0 2102 1747 4 1092 492 243 34 34 chr13 66532776 66532925 -53751387 - MMSAT4 Satellite Satellite 0 168 20 4 1092 545 303 63 35 chr13 66532858 66533145 -53751167 - MurSatRep1 Unknown Unknown 0 2137 1843 4 1092 409 311 0 0 chr13 66533028 66533160 -53751152 - MMSAT4 Satellite Satellite 0 168 37 5 1092 8726 206 71 15 chr13 66533194 66533382 -53750930 - MurSatRep1 Unknown Unknown 0 2137 1947 5 1092 402 21 0 0 chr13 66533382 66533429 -53750883 + (TA)n Simple_repeat Simple_repeat 1 47 0 5 1092 8726 206 71 15 chr13 66533429 66533999 -53750313 - MurSatRep1 Unknown Unknown -191 1946 1349 5 1092 261 0 0 0 chr13 66533999 66534028 -53750284 + (TA)n Simple_repeat Simple_repeat 1 29 0 5 1092 8726 206 71 15 chr13 66534028 66535291 -53749021 - MurSatRep1 Unknown Unknown -789 1348 3 5 1092 302 358 29 24 chr13 66535387 66535596 -53748716 + B3 SINE B2 2 211 -5 5 1092 26 0 0 0 chr13 66535872 66535898 -53748414 + AT_rich Low_complexity Low_complexity 1 26 0 5 1092 867 190 0 0 chr13 66536008 66536166 -53748146 - MurSatRep1 Unknown Unknown -1979 158 1 5 1092 446 200 16 57 chr13 66536214 66536336 -53747976 + Lx4B LINE L1 6336 6452 -606 5 1092 5829 215 38 20 chr13 66536336 66537693 -53746619 + Lx4B LINE L1 5677 7058 0 5 1092 462 375 38 17 chr13 66537734 66538062 -53746250 - MTD-int LTR MaLR -1219 361 2 5 1092 616 322 91 62 chr13 66538088 66538429 -53745883 - MTD LTR MaLR -16 403 53 5 1092 1033 138 0 0 chr13 66540550 66540695 -53743617 + B1_Mus2 SINE Alu 1 145 -2 6 1092 180 0 0 0 chr13 66540695 66540715 -53743597 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 6 1092 497 250 81 0 chr13 66540727 66540899 -53743413 + L1_Mur3 LINE L1 906 1091 -6637 6 1092 1250 253 69 62 chr13 66541221 66541740 -53742572 + L1_Mur3 LINE L1 1314 1836 -4044 6 1092 21 0 0 0 chr13 66542715 66542736 -53741576 + AT_rich Low_complexity Low_complexity 1 21 0 6 1092 319 286 21 70 chr13 66542907 66543050 -53741262 - MT2A LTR ERVL -324 209 74 6 1092 411 239 37 55 chr13 66543089 66543253 -53741059 + (TTAGGG)n Simple_repeat Simple_repeat 6 166 0 6 1092 21 0 0 0 chr13 66544478 66544499 -53739813 + AT_rich Low_complexity Low_complexity 1 21 0 6 1092 1459 167 172 35 chr13 66545244 66545617 -53738695 - RLTR33 LTR ERVK -254 424 1 6 1092 3729 18 2 0 chr13 66545939 66546334 -53737978 + MTA_Mm LTR MaLR 1 396 0 6 1092 9613 36 8 1 chr13 66546334 66547424 -53736888 + MTA_Mm-int LTR MaLR 1 1098 0 6 1092 3731 15 2 0 chr13 66547424 66547819 -53736493 + MTA_Mm LTR MaLR 1 396 0 6 1092 730 206 57 0 chr13 66547945 66548086 -53736226 + B1_Mur3 SINE Alu 1 149 0 6 1092 899 176 13 13 chr13 66548184 66548334 -53735978 - B1_Mur4 SINE Alu 0 150 1 7 1092 552 329 81 19 chr13 66548906 66549117 -53735195 + B4 SINE B4 1 224 -68 7 1092 556 338 18 35 chr13 66549139 66549424 -53734888 + B4A SINE B4 1 280 -12 7 1092 2324 170 72 77 chr13 66549441 66549556 -53734756 - RLTR18-int LTR ERVK -870 4491 4373 7 1092 774 187 265 0 chr13 66549556 66549722 -53734590 + B3 SINE B2 2 211 -5 7 1092 2324 170 160 47 chr13 66549722 66550493 -53733819 - RLTR18-int LTR ERVK -989 4372 3518 7 1092 904 163 20 0 chr13 66550493 66550640 -53733672 + B1_Mur4 SINE Alu 1 150 0 7 1092 1237 71 0 17 chr13 66550655 66550827 -53733485 + B2_Mm2 SINE B2 2 170 -25 7 1092 3347 177 28 24 chr13 66550864 66551501 -53732811 - RLTR18-int LTR ERVK -1830 3531 2892 7 1092 755 71 0 0 chr13 66551501 66551600 -53732712 - MTB LTR MaLR -4 322 224 7 1092 929 125 6 38 chr13 66552004 66552040 -53732272 - MTB LTR MaLR -247 153 122 7 1092 2492 147 5 24 chr13 66552040 66552457 -53731855 + RLTR9E LTR ERVK 1 409 0 7 1092 929 125 6 38 chr13 66552457 66552578 -53731734 - MTB LTR MaLR -279 121 1 7 1092 21 0 0 0 chr13 66552607 66552628 -53731684 + AT_rich Low_complexity Low_complexity 1 21 0 7 1092 350 236 72 41 chr13 66552685 66552782 -53731530 - PB1D10 SINE Alu -5 112 13 8 1092 231 288 0 91 chr13 66552703 66552791 -53731521 - B4A SINE B4 -124 168 89 8 1092 796 178 0 11 chr13 66552838 66552994 -53731318 + CT-rich Low_complexity Low_complexity 26 180 0 8 1092 1203 75 0 0 chr13 66552994 66553141 -53731171 - B1_Mus2 SINE Alu 0 147 1 8 1092 796 178 0 11 chr13 66553141 66553166 -53731146 + polypyrimidine Low_complexity Low_complexity 1 25 0 8 1092 4619 91 24 5 chr13 66553317 66553937 -53730375 + L1_Mus4 LINE L1 6005 6636 0 8 1092 457 348 33 14 chr13 66554758 66554971 -53729341 - RMER15 LTR ERVL -101 474 258 8 1092 1196 68 0 7 chr13 66554994 66555141 -53729171 + B1_Mm SINE Alu 2 147 0 8 1092 999 198 23 16 chr13 66555634 66556083 -53728229 - MMSAT4 Satellite Satellite -22 451 1 8 1092 765 134 18 0 chr13 66556525 66556637 -53727675 + PB1D9 SINE Alu 2 115 -5 8 1092 251 100 60 0 chr13 66558067 66558117 -53726195 + (CCCTAA)n Simple_repeat Simple_repeat 6 58 0 9 1092 342 328 28 69 chr13 66558201 66558417 -53725895 + MT2A LTR ERVL 75 281 -252 9 1092 1362 234 61 39 chr13 66559537 66560048 -53724264 - L1_Mur3 LINE L1 -4045 1835 1314 9 1092 510 256 40 18 chr13 66560367 66560594 -53723718 - L1_Mur3 LINE L1 -6637 1091 860 9 1092 1194 169 9 12 chr13 66561170 66561395 -53722917 - Lx4B LINE L1 -159 6899 6676 9 1092 238 35 0 0 chr13 66561401 66561430 -53722882 - Lx4B LINE L1 -677 6381 6353 9 1092 21 0 0 0 chr13 66561587 66561608 -53722704 + AT_rich Low_complexity Low_complexity 1 21 0 9 1092 225 224 19 0 chr13 66561610 66561676 -53722636 - B1_Mus2 SINE Alu 0 149 83 9 1092 9646 196 31 45 chr13 66562180 66563256 -53721056 + MurSatRep1 Unknown Unknown 1 1089 -1048 9 1092 730 116 0 272 chr13 66563256 66563458 -53720854 + B1_Mus1 SINE Alu 2 148 0 9 1092 9646 196 31 45 chr13 66563458 66564341 -53719971 + MurSatRep1 Unknown Unknown 1090 1923 -214 9 1092 1160 108 0 0 chr13 66564341 66564489 -53719823 + B1_Mus1 SINE Alu 1 148 0 9 1092 9646 196 31 45 chr13 66564489 66564695 -53719617 + MurSatRep1 Unknown Unknown 1924 2136 -1 9 1092 350 292 24 21 chr13 66564730 66565112 -53719200 + MMSAT4 Satellite Satellite 1 383 0 1 1092 476 295 45 40 chr13 66565002 66565200 -53719112 + MurSatRep1 Unknown Unknown 1851 2049 -88 1 1092 337 263 48 48 chr13 66565254 66565378 -53718934 + MMSAT4 Satellite Satellite 44 167 -1 1 1092 233 359 52 38 chr13 66565345 66565417 -53718895 + MurSatRep1 Unknown Unknown 1759 2044 -88 1 1092 317 325 4 4 chr13 66565417 66565627 -53718685 + MMSAT4 Satellite Satellite 1 210 0 1 1092 228 376 57 0 chr13 66565891 66566032 -53718280 - LTRIS_Mm LTR ERV1 -63 419 271 1 1092 383 220 55 91 chr13 66566553 66566663 -53717649 + B4 SINE B4 84 189 -103 1 1092 27 0 0 0 chr13 66566760 66566787 -53717525 + AT_rich Low_complexity Low_complexity 1 27 0 1 1092 281 76 29 29 chr13 66567189 66567257 -53717055 + (CCCCCA)n Simple_repeat Simple_repeat 1 68 0 1 1092 570 265 58 31 chr13 66567870 66568061 -53716251 + LTRIS4 LTR ERV1 294 489 -18 1 1092 4523 108 3 2 chr13 66568814 66569400 -53714912 + LTRIS_Mus LTR ERV1 1 587 0 1 1092 228 35 0 0 chr13 66570789 66570818 -53713494 + (TG)n Simple_repeat Simple_repeat 1 29 0 1 1092 251 277 68 102 chr13 66571028 66571233 -53713079 + RLTR25A LTR ERVK 897 1094 -9 1 1092 34 24 0 0 chr13 66571391 66571432 -53712880 + AT_rich Low_complexity Low_complexity 1 41 0 1 1092 4219 105 40 29 chr13 66571507 66572132 -53712180 - L1_Mus4 LINE L1 0 6636 6005 1 1092 357 216 0 25 chr13 66572235 66572334 -53711978 + GA-rich Low_complexity Low_complexity 2 97 0 1 1092 1214 95 6 0 chr13 66572334 66572513 -53711799 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 1092 357 216 0 25 chr13 66572513 66572532 -53711780 + polypurine Low_complexity Low_complexity 98 116 0 1 1092 345 275 66 38 chr13 66572579 66572685 -53711627 + PB1D10 SINE Alu 4 112 -5 1 1092 907 119 6 44 chr13 66572786 66572907 -53711405 + MTB_Mm LTR MaLR 1 115 -292 1 1092 2468 147 5 26 chr13 66572907 66573325 -53710987 - RLTR9E LTR ERVK 0 409 1 1 1092 907 119 6 44 chr13 66573325 66573361 -53710951 + MTB_Mm LTR MaLR 116 152 -255 1 1092 778 50 0 0 chr13 66573766 66573865 -53710447 + MTB_Mm LTR MaLR 224 322 -4 1 1092 1786 152 7 0 chr13 66573883 66574159 -53710153 - RLTR27 LTR ERVK 0 309 32 1 1092 2132 80 0 0 chr13 66574160 66574436 -53709876 - RLTR10A LTR ERVK -135 276 1 1 1092 2830 200 44 23 chr13 66574438 66575052 -53709260 + RLTR18-int LTR ERVK 2906 3532 -1829 1 1092 1200 83 0 18 chr13 66575089 66575260 -53709052 - B2_Mm2 SINE B2 -26 169 2 1 1092 860 152 22 0 chr13 66575276 66575414 -53708898 - B1_Mur4 SINE Alu -5 145 5 1 1092 2445 172 160 47 chr13 66575417 66576190 -53708122 + RLTR18-int LTR ERVK 3517 4369 -992 1 1092 774 187 265 0 chr13 66576190 66576356 -53707956 - B3 SINE B2 -5 211 2 1 1092 2445 170 71 78 chr13 66576356 66576491 -53707821 + RLTR18-int LTR ERVK 4370 4511 -850 1 1092 346 172 0 15 chr13 66576495 66576560 -53707752 - RLTR18B LTR ERVK -411 101 38 1 1092 1088 171 131 0 chr13 66576560 66576759 -53707553 + URR1A DNA MER1_type 1 225 -1 1 1092 2438 178 77 6 chr13 66576941 66577422 -53706890 - RLTR11A2 LTR ERVK -12 515 1 1 1092 303 265 35 24 chr13 66577461 66577546 -53706766 + polypyrimidine Low_complexity Low_complexity 3 88 0 1 1092 467 231 207 0 chr13 66577551 66577672 -53706640 - B1_Mur2 SINE Alu -1 148 3 1 1092 796 259 20 49 chr13 66577693 66577896 -53706416 - B3A SINE B2 0 198 2 1 1092 567 288 0 8 chr13 66578094 66578213 -53706099 - RSINE1 SINE B4 -30 135 18 1 1092 233 175 0 0 chr13 66578237 66578277 -53706035 - ID_B1 SINE B4 -1 223 184 1 1092 1188 212 65 90 chr13 66578274 66578750 -53705562 + MT2B LTR ERVL 6 601 0 1 1092 284 355 66 74 chr13 66579258 66579501 -53704811 + MLT1G1 LTR MaLR 94 334 -245 1 1092 895 163 21 7 chr13 66579649 66579791 -53704521 + B1_Mus1 SINE Alu 3 146 -2 1 1092 223 174 0 0 chr13 66579793 66579839 -53704473 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 1 1092 836 278 49 0 chr13 66579905 66580110 -53704202 - B3 SINE B2 0 216 2 1 1092 638 209 0 0 chr13 66580172 66580277 -53704035 - PB1D9 SINE Alu -10 110 6 1 1092 394 287 130 0 chr13 66580368 66580483 -53703829 + RSINE1 SINE B4 3 132 -33 1 1092 292 309 18 101 chr13 66580500 66580513 -53703799 + B4A SINE B4 78 162 -130 1 1092 795 156 27 47 chr13 66580513 66580661 -53703651 + B1_Mur3 SINE Alu 4 148 -1 1 1092 1140 205 13 13 chr13 66580680 66580912 -53703400 - MTC LTR MaLR -8 413 182 1 1092 3756 15 2 0 chr13 66581008 66581403 -53702909 + MTA_Mm LTR MaLR 1 396 0 1 1092 1383 105 11 0 chr13 66581487 66581677 -53702635 + B2_Mm1t SINE B2 2 193 0 1 1092 310 208 28 0 chr13 66581691 66581763 -53702549 + Lx2 LINE L1 6909 6982 -15 1 1092 624 206 79 8 chr13 66581802 66581929 -53702383 + B1_Mur2 SINE Alu 1 136 -13 1 1092 197 65 0 31 chr13 66581929 66581961 -53702351 + (CCAA)n Simple_repeat Simple_repeat 4 34 0 1 1092 351 44 0 0 chr13 66582435 66582480 -53701832 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1092 373 340 87 39 chr13 66583029 66583338 -53700974 + ORR1E LTR MaLR 19 342 -17 1 1092 295 259 0 0 chr13 66583498 66583552 -53700760 - B4 SINE B4 -10 282 229 1 1092 194 128 0 25 chr13 66583564 66583604 -53700708 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1092 466 353 18 35 chr13 66583650 66583935 -53700377 - B4A SINE B4 -12 280 1 1 1092 518 333 81 19 chr13 66583957 66584168 -53700144 - B4 SINE B4 -68 224 1 1 1093 944 155 13 20 chr13 66584740 66584891 -53699421 + B1_Mur4 SINE Alu 1 150 0 1 1093 699 177 54 47 chr13 66584991 66585139 -53699173 - B1_Mur3 SINE Alu 0 149 1 1 1093 1432 167 175 35 chr13 66585584 66585956 -53698356 + RLTR33 LTR ERVK 1 424 -254 1 1093 21 0 0 0 chr13 66586700 66586721 -53697591 + AT_rich Low_complexity Low_complexity 1 21 0 1 1093 22 88 0 0 chr13 66586790 66586847 -53697465 + AT_rich Low_complexity Low_complexity 1 57 0 1 1093 244 254 0 27 chr13 66587951 66588024 -53696288 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 1 1093 219 149 39 51 chr13 66588037 66588115 -53696197 + (CCCTAA)n Simple_repeat Simple_repeat 6 82 0 1 1093 229 250 16 16 chr13 66588120 66588181 -53696131 + MT2A LTR ERVL 72 132 -401 1 1093 4464 196 83 151 chr13 66589448 66589487 -53694825 + ORR1A4-int LTR MaLR 426 463 -1500 1 1093 1141 92 0 0 chr13 66589487 66589628 -53694684 + B1_Mm SINE Alu 2 142 -5 1 1093 929 110 0 7 chr13 66589630 66589776 -53694536 + (GGAA)n Simple_repeat Simple_repeat 3 147 0 1 1093 4464 196 83 151 chr13 66589776 66591104 -53693208 + ORR1A4-int LTR MaLR 464 1759 -204 1 1093 1028 117 14 20 chr13 66591104 66591252 -53693060 + B1_Mus1 SINE Alu 1 147 -1 1 1093 4464 196 83 151 chr13 66591252 66591530 -53692782 + ORR1A4-int LTR MaLR 1760 1963 0 1 1093 1695 190 0 72 chr13 66591530 66591876 -53692436 + ORR1A4 LTR MaLR 1 321 -8 1 1093 229 294 37 67 chr13 66592678 66592722 -53691590 + MurSatRep1 Unknown Unknown 1891 1929 -208 1 1093 1694 53 0 0 chr13 66592722 66592912 -53691400 - B2_Mm1t SINE B2 -3 190 1 1 1093 229 294 37 67 chr13 66592912 66593031 -53691281 + MurSatRep1 Unknown Unknown 1930 2049 -88 1 1093 8052 219 40 49 chr13 66593366 66595734 -53688578 - L1_Mur3 LINE L1 -1568 4312 1965 1 1093 7341 57 15 42 chr13 66595756 66596339 -53687973 - L1_Mus2 LINE L1 -3 6563 6011 1 1093 1076 86 7 7 chr13 66596339 66596479 -53687833 - B1_Mus1 SINE Alu -8 140 1 1 1093 7341 66 14 32 chr13 66596479 66597028 -53687284 - L1_Mus2 LINE L1 -556 6010 5458 1 1093 3939 89 6 2 chr13 66597027 66597577 -53686735 - L1_Mus2 LINE L1 -1032 4851 4300 1 1093 229 284 74 0 chr13 66597577 66597658 -53686654 + MTD LTR MaLR 298 384 -35 1 1093 1788 181 17 6 chr13 66598287 66598298 -53686014 - Lx2B LINE L1 -607 6393 6383 1 1093 2040 152 78 11 chr13 66598298 66598670 -53685642 - Lx2B LINE L1 -5 6995 6599 1 1093 1788 181 17 6 chr13 66598670 66599009 -53685303 - Lx2B LINE L1 -618 6382 6040 1 1093 1490 112 18 4 chr13 66599009 66599234 -53685078 + RMER16-int LTR ERVK 1762 1989 -3417 1 1093 1560 165 7 17 chr13 66599243 66599539 -53684773 - ORR1A3-int LTR MaLR -449 1514 1222 1 1093 263 254 0 0 chr13 66600466 66600521 -53683791 - RLTR22_Mur LTR ERVK -1792 56 2 1 1093 1368 58 0 0 chr13 66600670 66600877 -53683435 + (TTTC)n Simple_repeat Simple_repeat 1 207 0 1 1093 22 0 0 0 chr13 66600881 66600903 -53683409 + AT_rich Low_complexity Low_complexity 1 22 0 1 1093 240 328 0 0 chr13 66601007 66601074 -53683238 - B3A SINE B2 -125 73 7 1 1093 21 57 0 0 chr13 66601358 66601393 -53682919 + AT_rich Low_complexity Low_complexity 1 35 0 1 1093 622 271 35 55 chr13 66604009 66604236 -53680076 - LTRIS4 LTR ERV1 0 587 280 1 1093 2137 185 41 20 chr13 66605054 66605515 -53678797 + RLTR1 LTR ERV1 132 624 0 1 1093 271 282 266 31 chr13 66606568 66606696 -53677616 - MIRb SINE MIR -77 191 34 1 1093 195 0 56 28 chr13 66606696 66606732 -53677580 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 1 1093 1176 82 7 0 chr13 66606732 66606878 -53677434 - B1_Mm SINE Alu 0 147 1 1 1093 220 246 29 58 chr13 66607470 66607539 -53676773 - MIRb SINE MIR -183 85 19 1 1093 368 288 103 29 chr13 66607811 66607947 -53676365 - B1_Mur3 SINE Alu 0 149 4 1 1093 2068 89 23 3 chr13 66607947 66608251 -53676061 + MusHAL1 LINE L1 1670 1979 -733 1 1093 9293 239 18 70 chr13 66608245 66611032 -53673280 - L1_Mur2 LINE L1 -1746 4134 1515 1 1093 2015 122 112 0 chr13 66611032 66611326 -53672986 - ORR1A2 LTR MaLR 0 327 1 1 1093 9293 172 34 18 chr13 66611326 66612143 -53672169 - L1_Mur2 LINE L1 -4366 1514 672 1 1093 242 219 0 147 chr13 66612469 66612544 -53671768 + MT2B LTR ERVL 152 215 -386 1 1093 408 88 0 0 chr13 66612487 66612544 -53671768 + B1_Mus2 SINE Alu 2 58 -89 1 1093 387 157 0 28 chr13 66612544 66612555 -53671757 + ID_B1 SINE B4 83 148 -76 1 1093 23 0 0 0 chr13 66612711 66612734 -53671578 + AT_rich Low_complexity Low_complexity 1 23 0 1 1093 224 213 0 0 chr13 66613474 66613521 -53670791 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1093 34 24 0 0 chr13 66613523 66613564 -53670748 + AT_rich Low_complexity Low_complexity 1 41 0 1 1093 2087 35 8 4 chr13 66613661 66613919 -53670393 + L1Md_F3 LINE L1 6324 6582 -2 1 1093 1032 122 0 0 chr13 66615197 66615345 -53668967 + B1_Mus1 SINE Alu 1 148 0 1 1093 25 31 0 0 chr13 66616330 66616362 -53667950 + AT_rich Low_complexity Low_complexity 1 32 0 1 1093 360 95 0 0 chr13 66616483 66616546 -53667766 - Lx2 LINE L1 0 6997 6935 2 1093 851 172 0 12 chr13 66616552 66616717 -53667595 + Lx2 LINE L1 6768 6930 -67 2 1093 23 68 0 0 chr13 66618200 66618244 -53666068 + AT_rich Low_complexity Low_complexity 1 44 0 2 1093 21 0 0 0 chr13 66618625 66618646 -53665666 + AT_rich Low_complexity Low_complexity 1 21 0 2 1093 35 71 0 0 chr13 66618714 66618784 -53665528 + AT_rich Low_complexity Low_complexity 1 70 0 2 1093 209 254 0 40 chr13 66619866 66619940 -53664372 + (CCCTAA)n Simple_repeat Simple_repeat 6 76 0 2 1093 219 149 39 51 chr13 66619953 66620031 -53664281 + (CCCTAA)n Simple_repeat Simple_repeat 6 82 0 2 1093 272 298 0 35 chr13 66620069 66620156 -53664156 + MT2A LTR ERVL 74 157 -376 2 1093 987 92 35 0 chr13 66620960 66621102 -53663210 - B1_Mus2 SINE Alu 0 147 1 2 1093 642 349 70 41 chr13 66623227 66623568 -53660744 + MTD LTR MaLR 53 403 -16 2 1093 428 353 103 15 chr13 66623593 66623924 -53660388 + MTD-int LTR MaLR 2 361 -1219 2 1093 5609 207 32 16 chr13 66623971 66625325 -53658987 - Lx4B LINE L1 -6 7052 5677 2 1093 436 191 16 57 chr13 66625325 66625447 -53658865 - Lx5 LINE L1 -606 6452 6334 2 1093 854 169 0 0 chr13 66625496 66625656 -53658656 + MurSatRep1 Unknown Unknown 1 160 -1977 2 1093 226 191 21 0 chr13 66625793 66625840 -53658472 - B1_Mus2 SINE Alu 0 147 100 2 1093 448 367 23 28 chr13 66626059 66626275 -53658037 - B3 SINE B2 0 216 2 2 1093 5726 207 81 27 chr13 66626371 66627621 -53656691 + MurSatRep1 Unknown Unknown 1 1334 -803 2 1093 315 0 0 0 chr13 66627621 66627656 -53656656 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1093 5726 208 42 35 chr13 66627656 66628253 -53656059 + MurSatRep1 Unknown Unknown 1335 1943 -194 2 1093 405 0 0 0 chr13 66628253 66628298 -53656014 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1093 5726 208 42 35 chr13 66628298 66628421 -53655891 + MurSatRep1 Unknown Unknown 1944 2062 -75 2 1093 2958 50 0 0 chr13 66628421 66628781 -53655531 - L1Md_T LINE L1 0 6582 6223 2 1093 5726 208 42 35 chr13 66628781 66628872 -53655440 + MurSatRep1 Unknown Unknown 2063 2136 -1 2 1093 345 311 0 0 chr13 66628906 66629038 -53655274 + MMSAT4 Satellite Satellite 37 168 0 2 1093 432 299 29 24 chr13 66628921 66629127 -53655185 + MurSatRep1 Unknown Unknown 1843 2049 -88 2 1093 454 265 12 12 chr13 66629068 66629458 -53654854 + MMSAT4 Satellite Satellite 1 390 0 2 1093 447 286 60 32 chr13 66629343 66629628 -53654684 + MurSatRep1 Unknown Unknown 1845 2137 0 2 1093 488 260 8 8 chr13 66629487 66630360 -53653952 + MMSAT4 Satellite Satellite 1 873 0 2 1093 234 274 51 42 chr13 66630678 66630796 -53653516 + MMSAT4 Satellite Satellite 43 161 -7 2 1093 2430 143 7 24 chr13 66631369 66631785 -53652527 + RLTR9E LTR ERVK 1 409 0 2 1093 1434 247 5 45 chr13 66631941 66632322 -53651990 + ORR1A4 LTR MaLR 29 394 0 2 1093 5005 197 116 145 chr13 66632322 66632689 -53651623 + ORR1A4-int LTR MaLR 1 451 -1512 2 1093 1094 86 0 0 chr13 66632689 66632829 -53651483 + B1_Mm SINE Alu 2 141 -6 2 1093 5005 197 116 145 chr13 66632829 66634206 -53650106 + ORR1A4-int LTR MaLR 452 1756 -207 2 1093 1055 116 7 0 chr13 66634206 66634353 -53649959 + B1_Mus1 SINE Alu 1 148 0 2 1093 5005 197 116 145 chr13 66634353 66634629 -53649683 + ORR1A4-int LTR MaLR 1757 1963 0 2 1093 1628 198 9 56 chr13 66634629 66634966 -53649346 + ORR1A4 LTR MaLR 1 321 -8 2 1093 285 303 46 7 chr13 66635726 66635879 -53648433 + MurSatRep1 Unknown Unknown 1891 2049 -88 2 1093 9502 100 7 2 chr13 66635978 66637419 -53646893 - L1_Mm LINE L1 -136 5747 4300 2 1093 256 205 114 0 chr13 66637419 66637527 -53646785 + ORR1D2 LTR MaLR 258 421 0 2 1093 22 0 0 0 chr13 66638100 66638122 -53646190 + AT_rich Low_complexity Low_complexity 1 22 0 2 1093 295 236 0 0 chr13 66638327 66638399 -53645913 + Lx7 LINE L1 6745 6816 -880 2 1093 1271 260 13 16 chr13 66639081 66639453 -53644859 + Lx7 LINE L1 6806 7176 -520 2 1093 515 178 37 0 chr13 66639734 66639841 -53644471 + Lx7 LINE L1 7236 7346 -350 2 1093 215 31 31 0 chr13 66639877 66639909 -53644403 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1093 21 36 0 0 chr13 66639941 66639969 -53644343 + AT_rich Low_complexity Low_complexity 1 28 0 2 1093 22 0 0 0 chr13 66640067 66640089 -53644223 + AT_rich Low_complexity Low_complexity 1 22 0 2 1093 1827 160 78 11 chr13 66640958 66641330 -53642982 - Lx2B LINE L1 -5 6995 6599 2 1093 1791 173 15 3 chr13 66641339 66641669 -53642643 - Lx2B LINE L1 -625 6372 6039 2 1093 1346 120 13 18 chr13 66641669 66641898 -53642414 + RMER16-int LTR ERVK 1762 1989 -3417 2 1093 1561 203 37 6 chr13 66641907 66642259 -53642053 - ORR1A3-int LTR MaLR -449 1514 1152 2 1093 180 0 0 0 chr13 66643325 66643345 -53640967 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 2 1093 708 98 0 0 chr13 66643345 66643447 -53640865 + (TC)n Simple_repeat Simple_repeat 1 102 0 2 1093 1550 0 0 16 chr13 66643455 66643638 -53640674 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 2 1093 513 76 0 0 chr13 66643640 66643719 -53640593 + (TCCTG)n Simple_repeat Simple_repeat 2 80 0 2 1093 355 284 25 159 chr13 66643719 66643920 -53640392 - B2_Mm1a SINE B2 -9 184 11 2 1093 28 29 0 0 chr13 66644208 66644243 -53640069 + AT_rich Low_complexity Low_complexity 1 35 0 2 1093 207 194 63 21 chr13 66644607 66644702 -53639610 + (CA)n Simple_repeat Simple_repeat 1 99 0 2 1093 347 120 45 18 chr13 66644757 66644867 -53639445 + (CA)n Simple_repeat Simple_repeat 1 113 0 2 1093 354 23 0 0 chr13 66645440 66645483 -53638829 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 1093 1103 66 0 0 chr13 66645483 66645619 -53638693 - B1_Mus2 SINE Alu -10 137 2 2 1093 4177 104 7 2 chr13 66646527 66647107 -53637205 - LTRIS_Mus LTR ERV1 0 587 5 2 1093 625 292 52 14 chr13 66647827 66648039 -53636273 - LTRIS4 LTR ERV1 -18 489 270 2 1093 232 287 52 69 chr13 66648207 66648323 -53635989 - MURVY-LTR LTR ERV1 -405 114 1 2 1093 386 226 16 108 chr13 66648484 66648613 -53635699 + RLTR6_Mm LTR ERV1 1 117 -537 2 1093 724 197 79 90 chr13 66648699 66648966 -53635346 + RLTR5_Mm LTR ERV1 349 628 0 2 1093 26 0 0 0 chr13 66649604 66649630 -53634682 + AT_rich Low_complexity Low_complexity 1 26 0 2 1093 367 228 54 90 chr13 66649727 66649838 -53634474 - B4 SINE B4 -103 189 83 2 1093 240 319 103 107 chr13 66650200 66650491 -53633821 + RLTR41 LTR ERV1 100 389 -57 2 1093 258 309 0 8 chr13 66650857 66650984 -53633328 - MMSAT4 Satellite Satellite 0 168 43 2 1093 287 289 32 32 chr13 66651022 66651147 -53633165 - MMSAT4 Satellite Satellite 0 168 44 2 1093 422 290 30 25 chr13 66651199 66651397 -53632915 - MurSatRep1 Unknown Unknown -88 2049 1851 2 1093 309 277 24 24 chr13 66651458 66651658 -53632654 - MMSAT4 Satellite Satellite -5 200 1 2 1093 3859 202 38 56 chr13 66651704 66651913 -53632399 - MurSatRep1 Unknown Unknown -1 2136 1929 2 1093 956 100 57 0 chr13 66651913 66652053 -53632259 - B1_Mus1 SINE Alu 0 148 1 2 1093 3859 202 38 56 chr13 66652053 66652926 -53631386 - MurSatRep1 Unknown Unknown -209 1928 1074 2 1093 677 99 8 0 chr13 66652926 66653047 -53631265 + (TTTC)n Simple_repeat Simple_repeat 1 122 0 2 1093 737 56 0 297 chr13 66653047 66653249 -53631063 - B1_Mus1 SINE Alu -5 143 2 2 1093 4398 201 40 25 chr13 66653249 66654322 -53629990 - MurSatRep1 Unknown Unknown -1048 1089 1 2 1093 234 288 15 0 chr13 66654826 66654892 -53629420 + B1_Mur3 SINE Alu 83 149 0 2 1093 21 0 0 0 chr13 66654896 66654917 -53629395 + AT_rich Low_complexity Low_complexity 1 21 0 2 1093 1017 162 29 10 chr13 66655120 66655326 -53628986 + Lx4B LINE L1 6690 6899 -159 2 1093 422 256 40 18 chr13 66655902 66656129 -53628183 + L1_Mur3 LINE L1 860 1091 -6637 2 1093 1054 229 39 118 chr13 66656453 66657013 -53627299 + L1_Mur3 LINE L1 1320 1835 -4045 2 1093 351 326 29 86 chr13 66658113 66658358 -53625954 - MT2A LTR ERVL -228 305 75 2 1093 251 100 60 0 chr13 66658442 66658492 -53625820 + (TTAGGG)n Simple_repeat Simple_repeat 6 58 0 2 1093 2196 84 0 0 chr13 66659545 66659854 -53624458 - L1_Mus4 LINE L1 -323 6313 6005 2 1093 233 119 0 23 chr13 66659950 66659993 -53624319 + (GGA)n Simple_repeat Simple_repeat 2 43 0 2 1093 1078 122 0 11 chr13 66659993 66660175 -53624137 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1093 345 267 70 42 chr13 66660221 66660343 -53623969 + PB1D10 SINE Alu 4 128 -21 2 1093 885 145 54 12 chr13 66660428 66660549 -53623763 + MTB LTR MaLR 1 128 -272 2 1093 707 135 16 40 chr13 66660549 66660709 -53623603 - RLTR9C LTR ERVK 0 409 256 2 1093 838 153 13 34 chr13 66661085 66661234 -53623078 + B1_Mur4 SINE Alu 1 146 -4 2 1093 660 209 58 0 chr13 66661336 66661475 -53622837 - B1_Mur3 SINE Alu -2 147 1 2 1093 1517 166 162 39 chr13 66661916 66662305 -53622007 + RLTR33 LTR ERVK 1 437 -241 2 1093 21 0 0 0 chr13 66663010 66663031 -53621281 + AT_rich Low_complexity Low_complexity 1 21 0 2 1093 191 186 29 49 chr13 66664259 66664361 -53619951 + (CCCTAA)n Simple_repeat Simple_repeat 4 103 0 2 1093 1274 246 52 52 chr13 66665169 66665692 -53618620 - L1_Mur3 LINE L1 -4044 1836 1314 2 1093 16271 57 0 2 chr13 66667229 66670084 -53614228 - L1Md_F2 LINE L1 -12 6570 3722 2 1093 677 325 84 67 chr13 66670176 66670519 -53613793 + ORR1B1 LTR MaLR 50 398 -21 2 1093 527 366 32 16 chr13 66670544 66670873 -53613439 + ORR1B1-int LTR MaLR 2 361 -1219 2 1093 5226 201 20 20 chr13 66671051 66672375 -53611937 - Lx4B LINE L1 -175 6883 5644 2 1093 808 181 0 0 chr13 66672424 66672584 -53611728 + MurSatRep1 Unknown Unknown 1 160 -1977 2 1093 343 401 16 31 chr13 66673015 66673208 -53611104 - B3A SINE B2 -7 191 2 2 1093 7960 197 75 18 chr13 66673304 66674554 -53609758 + MurSatRep1 Unknown Unknown 1 1333 -804 2 1093 246 62 0 0 chr13 66674554 66674586 -53609726 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 1093 7960 226 69 26 chr13 66674586 66675391 -53608921 + MurSatRep1 Unknown Unknown 1334 1943 -194 2 1093 321 276 38 38 chr13 66675391 66675523 -53608789 + MMSAT4 Satellite Satellite 37 168 0 2 1093 7960 226 69 26 chr13 66675523 66675777 -53608535 + MurSatRep1 Unknown Unknown 1944 2137 0 2 1093 461 282 0 0 chr13 66675717 66675859 -53608453 + MMSAT4 Satellite Satellite 27 168 0 2 1093 506 313 51 36 chr13 66675813 66676252 -53608060 + MurSatRep1 Unknown Unknown 1747 2137 0 2 1093 266 291 25 8 chr13 66676493 66676611 -53607701 + MMSAT4 Satellite Satellite 43 162 -6 2 1093 2370 148 20 17 chr13 66677268 66677675 -53606637 + RLTR9E LTR ERVK 2 409 0 2 1093 234 289 0 0 chr13 66677717 66677793 -53606519 + MMSAT4 Satellite Satellite 17 92 -76 2 1093 1564 226 8 42 chr13 66677837 66678216 -53606096 + ORR1B1 LTR MaLR 29 394 0 2 1093 922 222 282 26 chr13 66678216 66678232 -53606080 + ORR1B1-int LTR MaLR 1 14 -1778 2 1093 3567 15 0 0 chr13 66678232 66678628 -53605684 + MTA_Mm LTR MaLR 1 396 0 2 1093 9209 33 2 1 chr13 66678628 66679725 -53604587 + MTA_Mm-int LTR MaLR 1 1098 0 2 1093 3553 18 0 0 chr13 66679725 66680121 -53604191 + MTA_Mm LTR MaLR 1 396 0 2 1093 922 222 282 26 chr13 66680121 66680482 -53603830 + ORR1B1-int LTR MaLR 15 475 -1317 2 1093 1011 113 0 0 chr13 66680480 66680622 -53603690 + B1_Mus1 SINE Alu 6 147 -1 2 1093 287 79 0 0 chr13 66680633 66680671 -53603641 + (GGAA)n Simple_repeat Simple_repeat 4 41 0 2 1093 687 132 0 0 chr13 66680671 66680785 -53603527 + (GA)n Simple_repeat Simple_repeat 1 114 0 2 1093 513 300 40 29 chr13 66680787 66680962 -53603350 + ORR1B1-int LTR MaLR 464 640 -1323 2 1093 1557 36 0 35 chr13 66681038 66681238 -53603074 - B2_Mm1t SINE B2 0 193 1 2 1093 454 288 89 72 chr13 66681241 66681477 -53602835 + MT2B LTR ERVL 18 257 -344 2 1093 2299 197 42 8 chr13 66681369 66681941 -53602371 + ORR1B1-int LTR MaLR 324 1228 -735 2 1093 2999 228 14 71 chr13 66681943 66682984 -53601328 - L1_Mur3 LINE L1 -2934 2946 1965 2 1093 6617 74 8 44 chr13 66683008 66683597 -53600715 - L1_Mus2 LINE L1 0 6566 6010 3 1093 903 122 21 7 chr13 66683597 66683737 -53600575 - B1_Mus1 SINE Alu -5 143 2 3 1093 10155 104 3 13 chr13 66683737 66685447 -53598865 - L1_Mus2 LINE L1 -557 6009 4304 3 1093 300 214 106 10 chr13 66685453 66685557 -53598755 + MTD LTR MaLR 298 411 -8 3 1093 21 0 0 0 chr13 66686135 66686156 -53598156 + AT_rich Low_complexity Low_complexity 1 21 0 3 1093 22 0 0 0 chr13 66686191 66686213 -53598099 + AT_rich Low_complexity Low_complexity 1 22 0 3 1093 309 236 0 0 chr13 66686368 66686440 -53597872 + Lx7 LINE L1 6745 6816 -880 3 1093 2653 73 77 206 chr13 66686809 66687397 -53596915 - RLTR1B LTR ERV1 0 512 1 3 1093 970 209 24 0 chr13 66687397 66687603 -53596709 - MMERGLN-int LTR ERV1 0 7556 7346 3 1093 8077 37 6 44 chr13 66687603 66688794 -53595518 + L1Md_A LINE L1 254 1390 -4490 3 1093 290 181 44 57 chr13 66688917 66689080 -53595232 + (CCCTAA)n Simple_repeat Simple_repeat 1 160 0 3 1093 242 233 16 16 chr13 66689085 66689146 -53595166 + MT2A LTR ERVL 72 132 -401 3 1093 226 379 16 8 chr13 66689314 66689439 -53594873 + MT2B LTR ERVL 378 503 -98 3 1093 237 228 29 38 chr13 66690632 66690737 -53593575 + (TCTCTG)n Simple_repeat Simple_repeat 4 107 0 3 1093 442 253 80 6 chr13 66690827 66691002 -53593310 - L1_Mur3 LINE L1 -6637 1075 888 3 1093 1153 75 0 0 chr13 66691034 66691181 -53593131 - B1_Mus2 SINE Alu 0 147 1 3 1093 704 319 90 59 chr13 66693301 66693657 -53590655 + MTD LTR MaLR 53 419 0 3 1093 475 360 49 43 chr13 66693667 66693995 -53590317 + MTD-int LTR MaLR 2 331 -1039 3 1093 5432 216 34 15 chr13 66694043 66695393 -53588919 - Lx4B LINE L1 -6 7052 5677 3 1093 440 191 16 50 chr13 66695393 66695514 -53588798 - Lx4B LINE L1 -606 6452 6336 3 1093 878 162 0 0 chr13 66695563 66695723 -53588589 + MurSatRep1 Unknown Unknown 1 160 -1977 3 1093 26 0 0 0 chr13 66695831 66695857 -53588455 + AT_rich Low_complexity Low_complexity 1 26 0 3 1093 210 213 21 0 chr13 66695860 66695907 -53588405 - B1_Mus2 SINE Alu 0 147 100 3 1093 418 374 18 32 chr13 66696125 66696343 -53587969 - B3 SINE B2 0 216 2 3 1093 8070 196 70 24 chr13 66696439 66696722 -53587590 + MurSatRep1 Unknown Unknown 1 292 -1845 3 1093 1544 38 5 0 chr13 66696722 66696907 -53587405 - B2_Mm1t SINE B2 -6 187 2 3 1093 8070 196 70 24 chr13 66696907 66697892 -53586420 + MurSatRep1 Unknown Unknown 293 1349 -788 3 1093 222 118 0 0 chr13 66697892 66697926 -53586386 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1093 8070 196 70 24 chr13 66697926 66698698 -53585614 + MurSatRep1 Unknown Unknown 1350 2136 -1 3 1093 514 300 59 43 chr13 66698673 66698748 -53585564 + MurSatRep1 Unknown Unknown 1747 1796 -341 3 1093 308 218 52 52 chr13 66698748 66698864 -53585448 + MMSAT4 Satellite Satellite 53 168 0 3 1093 514 300 59 43 chr13 66698864 66699373 -53584939 + MurSatRep1 Unknown Unknown 1797 2137 0 3 1093 558 244 7 7 chr13 66699228 66699430 -53584882 + MMSAT4 Satellite Satellite 1 202 0 3 1093 263 306 8 8 chr13 66700170 66700292 -53584020 + MMSAT4 Satellite Satellite 47 168 0 3 1093 249 292 7 55 chr13 66700406 66700440 -53583872 + MMSAT4 Satellite Satellite 31 61 -107 3 1093 2516 142 5 17 chr13 66700440 66700854 -53583458 + RLTR9E LTR ERVK 1 409 0 3 1093 249 292 7 55 chr13 66700854 66700964 -53583348 + MMSAT4 Satellite Satellite 62 168 0 3 1093 1186 210 0 174 chr13 66701021 66701113 -53583199 + ORR1A4 LTR MaLR 1 52 -277 3 1093 1217 34 0 0 chr13 66701113 66701259 -53583053 - B1_Mus2 SINE Alu 0 147 2 3 1093 1186 210 0 174 chr13 66701259 66701563 -53582749 + ORR1A4 LTR MaLR 53 328 -1 3 1093 859 161 273 3 chr13 66701564 66701928 -53582384 + ORR1A4-int LTR MaLR 1 462 -1501 3 1093 1074 67 0 0 chr13 66701931 66702065 -53582247 + B1_Mm SINE Alu 2 135 -12 3 1093 1106 102 0 6 chr13 66702067 66702235 -53582077 + (GAAA)n Simple_repeat Simple_repeat 2 168 0 3 1093 340 158 132 0 chr13 66703214 66703290 -53581022 + ORR1A4-int LTR MaLR 1258 1343 -449 3 1093 1289 129 18 4 chr13 66703299 66703524 -53580788 - RMER16-int LTR ERVK -3417 1989 1762 3 1093 1595 190 18 6 chr13 66703524 66703853 -53580459 + Lx2B LINE L1 6039 6371 -629 3 1093 2009 126 84 14 chr13 66703862 66704233 -53580079 + Lx2B LINE L1 6599 6995 -5 3 1093 21 0 0 0 chr13 66705107 66705128 -53579184 + AT_rich Low_complexity Low_complexity 1 21 0 3 1093 203 140 59 20 chr13 66705288 66705339 -53578973 + A-rich Low_complexity Low_complexity 2 54 0 3 1093 572 211 0 0 chr13 66705342 66705465 -53578847 - Lx7 LINE L1 -338 7358 7236 3 1093 1472 254 12 15 chr13 66705747 66706155 -53578157 - Lx7 LINE L1 -520 7176 6770 3 1093 1212 54 0 0 chr13 66706155 66706302 -53578010 + B1_Mus2 SINE Alu 1 147 0 3 1093 21 0 0 0 chr13 66706549 66706570 -53577742 + AT_rich Low_complexity Low_complexity 1 21 0 3 1093 3606 93 3 18 chr13 66707242 66707813 -53576499 + L1_Mus2 LINE L1 4289 4851 -1032 3 1093 3090 65 9 5 chr13 66707812 66708363 -53575949 + L1_Mus2 LINE L1 5458 6010 -556 3 1093 1027 86 7 7 chr13 66708363 66708504 -53575808 + B1_Mus1 SINE Alu 1 141 -7 3 1093 1281 62 0 0 chr13 66708520 66708680 -53575632 + B2_Mm1a SINE B2 1 160 -33 3 1093 702 0 0 0 chr13 66708680 66708758 -53575554 + (TAAA)n Simple_repeat Simple_repeat 3 80 0 3 1093 4013 79 2 41 chr13 66708765 66709348 -53574964 + L1_Mus2 LINE L1 6004 6563 -3 3 1093 1268 224 26 85 chr13 66709360 66709478 -53574834 + L1_Mur3 LINE L1 1953 2057 -3823 3 1093 210 37 0 0 chr13 66709478 66709505 -53574807 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1093 1268 211 22 45 chr13 66709505 66709848 -53574464 + L1_Mur3 LINE L1 2058 2394 -3486 3 1093 423 380 22 27 chr13 66709859 66710081 -53574231 + B4A SINE B4 60 280 -12 3 1093 503 78 0 13 chr13 66710126 66710204 -53574108 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1093 297 259 0 0 chr13 66710216 66710270 -53574042 + B4 SINE B4 229 282 -10 3 1093 397 331 96 48 chr13 66710430 66710744 -53573568 - ORR1E LTR MaLR -17 342 14 3 1093 408 55 0 0 chr13 66711287 66711342 -53572970 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1093 197 65 0 31 chr13 66711816 66711848 -53572464 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 3 1093 598 199 79 8 chr13 66711848 66711975 -53572337 - B1_Mur2 SINE Alu -13 136 1 3 1093 276 212 28 32 chr13 66711990 66712101 -53572211 - Lx2 LINE L1 -1 6999 6896 3 1093 1249 116 11 0 chr13 66712101 66712291 -53572021 - B2_Mm1t SINE B2 0 193 2 3 1093 3497 15 5 0 chr13 66712375 66712769 -53571543 - MTA_Mm LTR MaLR 0 396 1 3 1093 1172 212 4 4 chr13 66712865 66713097 -53571215 + MTC LTR MaLR 182 413 -8 3 1093 799 162 27 47 chr13 66713120 66713269 -53571043 - B1_Mur3 SINE Alu 0 149 4 3 1093 268 309 20 60 chr13 66713182 66713282 -53571030 - B4A SINE B4 -119 173 78 3 1093 390 296 130 0 chr13 66713299 66713414 -53570898 - RSINE1 SINE B4 -33 132 3 3 1093 594 208 0 0 chr13 66713505 66713601 -53570711 + PB1D9 SINE Alu 6 101 -19 3 1093 759 278 49 0 chr13 66713672 66713877 -53570435 + B3 SINE B2 2 216 0 3 1093 180 143 0 0 chr13 66713948 66713990 -53570322 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 3 1093 816 170 21 7 chr13 66713991 66714133 -53570179 - B1_Mus1 SINE Alu -2 146 3 3 1093 276 360 66 74 chr13 66714281 66714524 -53569788 - MLT1G1 LTR MaLR -245 334 94 3 1093 1199 240 24 57 chr13 66715038 66715374 -53568938 - MT2B LTR ERVL 0 601 277 3 136 6917 36 30 1 chr13 66715377 66716208 -53568104 + RLTR13A LTR ERVK 1 855 0 3 1094 670 200 16 8 chr13 66716225 66716351 -53567961 - MT2B LTR ERVL -401 132 6 3 1094 588 274 8 25 chr13 66716412 66716532 -53567780 + RSINE1 SINE B4 18 135 -30 3 1094 750 237 21 48 chr13 66716726 66716912 -53567400 + B3A SINE B2 1 181 -17 3 1094 27 29 0 0 chr13 66716912 66716946 -53567366 + AT_rich Low_complexity Low_complexity 1 34 0 3 1094 420 224 216 0 chr13 66716957 66717073 -53567239 + B1_Mur2 SINE Alu 3 143 -6 3 1094 322 250 22 43 chr13 66717076 66717168 -53567144 + polypurine Low_complexity Low_complexity 4 93 0 3 1094 2583 184 32 6 chr13 66717208 66717710 -53566602 + RLTR11A2 LTR ERVK 1 515 -12 3 1094 227 269 37 49 chr13 66717769 66717851 -53566461 - Charlie1b DNA MER1_type -339 184 104 3 1094 1030 161 131 0 chr13 66717892 66718091 -53566221 - URR1A DNA MER1_type -1 225 1 3 1094 344 172 0 15 chr13 66718091 66718156 -53566156 + RLTR18B LTR ERVK 38 101 -411 3 1094 2227 169 68 74 chr13 66718160 66718295 -53566017 - RLTR18-int LTR ERVK -850 4511 4373 3 1094 714 181 265 0 chr13 66718295 66718461 -53565851 + B3 SINE B2 2 211 -5 3 1094 2227 168 158 45 chr13 66718461 66719233 -53565079 - RLTR18-int LTR ERVK -989 4372 3518 3 1094 758 184 20 0 chr13 66719233 66719380 -53564932 + B1_Mur4 SINE Alu 1 150 0 3 1094 1186 83 0 17 chr13 66719396 66719568 -53564744 + B2_Mm2 SINE B2 2 170 -25 3 1094 2911 185 26 26 chr13 66719584 66720227 -53564085 - RLTR18-int LTR ERVK -1811 3550 2908 3 1094 1984 113 61 26 chr13 66720232 66720319 -53563993 + L1_Mus4 LINE L1 6279 6364 -272 3 1094 3283 47 110 2 chr13 66720319 66720748 -53563564 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1094 1984 113 61 26 chr13 66720748 66721006 -53563306 + L1_Mus4 LINE L1 6365 6636 0 3 1094 520 354 24 32 chr13 66721829 66722080 -53562232 - RMER15 LTR ERVL -101 474 226 3 1094 964 174 13 2 chr13 66722534 66723147 -53561165 - MMSAT4 Satellite Satellite -24 619 1 3 1094 982 141 15 3 chr13 66723161 66723530 -53560782 - MMSAT4 Satellite Satellite 0 373 1 3 1094 1059 102 0 0 chr13 66724070 66724217 -53560095 + B1_Mus1 SINE Alu 2 148 0 3 1094 251 100 60 0 chr13 66725650 66725700 -53558612 + (CCCTAA)n Simple_repeat Simple_repeat 6 58 0 3 1094 388 326 29 82 chr13 66725784 66726028 -53558284 + MT2A LTR ERVL 75 305 -228 3 1094 590 216 8 191 chr13 66727118 66727473 -53556839 - L1_Mur3 LINE L1 -4045 1835 1546 3 1094 13956 46 20 14 chr13 66727473 66727569 -53556743 - RLTR45-int LTR ERVK -339 6905 6819 3 1094 790 19 0 0 chr13 66727569 66727675 -53556637 - L1Md_T LINE L1 -1 6581 6476 3 1094 13956 46 20 14 chr13 66727675 66729407 -53554905 - RLTR45-int LTR ERVK -426 6818 5065 3 1094 4218 61 7 24 chr13 66729400 66730018 -53554294 - RLTR45-int LTR ERVK -3258 3986 3380 3 1094 9923 38 19 20 chr13 66729996 66731344 -53552968 - RLTR45-int LTR ERVK -4039 3205 1859 3 1094 9565 67 61 7 chr13 66731338 66732684 -53551628 - RLTR45-int LTR ERVK -5826 1418 1 3 1094 3185 99 34 13 chr13 66732684 66733156 -53551156 - RLTR45 LTR ERVK 0 482 1 3 1094 1070 183 10 5 chr13 66733804 66734013 -53550299 - Lx4B LINE L1 -159 6899 6690 3 1094 24 32 0 0 chr13 66734219 66734250 -53550062 + AT_rich Low_complexity Low_complexity 1 31 0 3 1094 222 284 0 29 chr13 66734250 66734319 -53549993 - B1_Mur3 SINE Alu 0 149 83 3 1094 3992 193 42 23 chr13 66734823 66735764 -53548548 + MurSatRep1 Unknown Unknown 1 959 -1178 3 1094 481 225 86 99 chr13 66735764 66735894 -53548418 + MT2B LTR ERVL 29 155 -446 3 1094 834 72 0 0 chr13 66735894 66736005 -53548307 + B1_Mus1 SINE Alu 2 112 -36 3 1094 729 63 0 0 chr13 66736011 66736106 -53548206 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 3 1094 4066 191 33 54 chr13 66736114 66736970 -53547342 + MurSatRep1 Unknown Unknown 1093 1923 -214 3 1094 1170 68 0 0 chr13 66736970 66737116 -53547196 + B1_Mus1 SINE Alu 1 146 -2 3 1094 4066 191 33 54 chr13 66737116 66737326 -53546986 + MurSatRep1 Unknown Unknown 1924 2136 -1 3 1094 303 271 32 24 chr13 66737372 66737571 -53546741 + MMSAT4 Satellite Satellite 1 200 0 3 1094 372 306 30 25 chr13 66737632 66737830 -53546482 + MurSatRep1 Unknown Unknown 1851 2049 -88 4 1094 285 301 8 8 chr13 66737880 66738004 -53546308 + MMSAT4 Satellite Satellite 44 167 -1 4 1094 268 338 0 0 chr13 66738043 66738253 -53546059 + MMSAT4 Satellite Satellite 1 210 0 4 1094 1102 67 0 0 chr13 66739928 66740063 -53544249 + B1_Mus2 SINE Alu 2 136 -11 4 1094 249 57 0 0 chr13 66740063 66740098 -53544214 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 1094 246 261 50 7 chr13 66740587 66740726 -53543586 + (TG)n Simple_repeat Simple_repeat 1 145 0 4 1094 428 111 51 8 chr13 66740737 66740855 -53543457 + (TG)n Simple_repeat Simple_repeat 1 123 0 4 1094 221 183 63 21 chr13 66740910 66741005 -53543307 + (TG)n Simple_repeat Simple_repeat 1 99 0 4 1094 28 29 0 0 chr13 66741369 66741404 -53542908 + AT_rich Low_complexity Low_complexity 1 35 0 4 1094 247 274 32 0 chr13 66741692 66741754 -53542558 + B2_Mm1t SINE B2 11 74 -119 4 1094 24 0 0 0 chr13 66741866 66741890 -53542422 + AT_rich Low_complexity Low_complexity 1 24 0 4 1094 1142 73 0 11 chr13 66741890 66742070 -53542242 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 4 1094 253 93 104 26 chr13 66742070 66742147 -53542165 + GA-rich Low_complexity Low_complexity 4 86 0 4 1094 317 236 122 54 chr13 66742150 66742298 -53542014 + HAL1-3A_ME LINE L1 2282 2439 -419 4 1094 339 292 72 59 chr13 66742312 66742465 -53541847 + HAL1-3A_ME LINE L1 2284 2438 -420 4 1094 750 78 0 0 chr13 66742466 66742568 -53541744 + (GA)n Simple_repeat Simple_repeat 1 102 0 4 1094 1537 206 37 6 chr13 66743637 66743989 -53540323 + ORR1A3-int LTR MaLR 1152 1514 -449 4 1094 1326 124 13 13 chr13 66743998 66744226 -53540086 - RMER16-int LTR ERVK -3417 1989 1762 4 1094 1755 162 15 6 chr13 66744226 66744556 -53539756 + Lx2B LINE L1 6039 6371 -629 4 1094 1839 155 81 11 chr13 66744565 66744936 -53539376 + Lx2B LINE L1 6599 6995 -5 4 1094 22 0 0 0 chr13 66745804 66745826 -53538486 + AT_rich Low_complexity Low_complexity 1 22 0 4 1094 216 257 4 42 chr13 66745845 66746039 -53538273 + A-rich Low_complexity Low_complexity 1 186 0 4 1094 541 184 18 0 chr13 66746048 66746157 -53538155 - Lx7 LINE L1 -350 7346 7236 4 1094 181 291 89 44 chr13 66746294 66746384 -53537928 - MIRc SINE MIR -39 229 136 4 1094 1273 256 22 14 chr13 66746439 66746807 -53537505 - Lx7 LINE L1 -520 7176 6806 4 1094 269 250 0 0 chr13 66747490 66747562 -53536750 - Lx7 LINE L1 -880 6816 6745 4 1094 22 0 0 0 chr13 66747766 66747788 -53536524 + AT_rich Low_complexity Low_complexity 1 22 0 4 1094 282 198 144 0 chr13 66748361 66748460 -53535852 - MTD LTR MaLR 0 421 298 4 1094 9687 98 3 2 chr13 66748460 66749906 -53534406 + L1_Mm LINE L1 4300 5747 -136 4 1094 232 322 46 7 chr13 66750005 66750158 -53534154 - MurSatRep1 Unknown Unknown -88 2049 1891 4 1094 484 134 164 27 chr13 66750246 66750392 -53533920 + Lx2B LINE L1 6830 6995 -5 4 1094 202 158 0 26 chr13 66751199 66751238 -53533074 + (TTA)n Simple_repeat Simple_repeat 3 40 0 4 1094 210 120 59 20 chr13 66751404 66751455 -53532857 + A-rich Low_complexity Low_complexity 2 54 0 4 1094 568 211 0 0 chr13 66751458 66751581 -53532731 - Lx7 LINE L1 -338 7358 7236 4 1094 1364 239 11 17 chr13 66751884 66752237 -53532075 - Lx7 LINE L1 -544 7152 6802 4 1094 279 264 0 0 chr13 66752895 66752967 -53531345 - Lx7 LINE L1 -880 6816 6745 4 1094 22 0 0 0 chr13 66753172 66753194 -53531118 + AT_rich Low_complexity Low_complexity 1 22 0 4 1094 310 236 108 56 chr13 66753765 66753873 -53530439 - MTD LTR MaLR -15 404 293 4 1094 9324 110 12 3 chr13 66753879 66755356 -53528956 + L1_Mm LINE L1 4304 5793 -90 4 1094 33766 45 1 3 chr13 66755357 66760599 -53523713 + L1Md_T LINE L1 262 5589 -297 4 1094 8537 31 0 0 chr13 66760599 66761595 -53522717 + L1Md_T LINE L1 5590 6585 0 4 1094 5457 80 11 43 chr13 66761594 66761822 -53522490 + L1_Mus2 LINE L1 5783 6004 -562 4 1094 984 100 21 7 chr13 66761822 66761963 -53522349 + B1_Mus1 SINE Alu 1 143 -5 4 1094 5457 80 11 43 chr13 66761963 66762544 -53521768 + L1_Mus2 LINE L1 6005 6566 0 4 1094 7039 225 35 45 chr13 66762568 66762681 -53521631 + L1_Mur3 LINE L1 1965 2058 -3822 4 1094 180 0 0 0 chr13 66762681 66762701 -53521611 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1094 7039 225 35 45 chr13 66762701 66764959 -53519353 + L1_Mur3 LINE L1 2059 4312 -1568 4 1094 270 303 46 7 chr13 66765294 66765447 -53518865 - MurSatRep1 Unknown Unknown -88 2049 1891 4 1094 4870 228 103 107 chr13 66766244 66768288 -53516024 - ORR1B1-int LTR MaLR 0 1792 15 4 1094 540 0 0 0 chr13 66768288 66768348 -53515964 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 1094 4870 206 141 101 chr13 66768348 66768393 -53515919 - ORR1B1-int LTR MaLR -1500 463 463 4 1094 1051 105 0 14 chr13 66768393 66768538 -53515774 - B1_Mus2 SINE Alu -2 145 3 4 1094 4870 206 141 101 chr13 66768538 66768906 -53515406 - ORR1B1-int LTR MaLR -1501 462 1 4 1094 1618 226 8 42 chr13 66768906 66769285 -53515027 - ORR1B1 LTR MaLR 0 394 29 4 1094 2203 158 22 24 chr13 66769447 66769856 -53514456 - RLTR9E LTR ERVK 0 409 2 4 1094 274 276 30 17 chr13 66770430 66770630 -53513682 - MMSAT4 Satellite Satellite -7 202 1 4 1094 418 268 14 14 chr13 66770927 66771234 -53513078 - MMSAT4 Satellite Satellite 0 307 1 4 1094 476 299 68 50 chr13 66771177 66771561 -53512751 - MurSatRep1 Unknown Unknown 0 2137 1747 4 1094 459 239 14 14 chr13 66771515 66771655 -53512657 - MMSAT4 Satellite Satellite 0 168 29 4 1094 540 290 55 39 chr13 66771597 66772304 -53512008 - MurSatRep1 Unknown Unknown 0 2137 1747 4 1094 345 311 0 0 chr13 66772187 66772319 -53511993 - MMSAT4 Satellite Satellite 0 168 37 4 1094 7907 198 69 25 chr13 66772353 66772444 -53511868 - MurSatRep1 Unknown Unknown 0 2137 2064 4 1094 2891 53 0 0 chr13 66772444 66772804 -53511508 + L1Md_A LINE L1 6223 6582 0 4 1094 7907 198 69 25 chr13 66772804 66772926 -53511386 - MurSatRep1 Unknown Unknown -74 2063 1943 4 1094 291 54 0 0 chr13 66772926 66772963 -53511349 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 1094 7907 198 69 25 chr13 66772963 66773530 -53510782 - MurSatRep1 Unknown Unknown -195 1942 1348 4 1094 198 0 0 0 chr13 66773530 66773552 -53510760 + (TA)n Simple_repeat Simple_repeat 1 22 0 4 1094 7907 198 69 25 chr13 66773552 66774816 -53509496 - MurSatRep1 Unknown Unknown -790 1347 2 4 1094 258 370 19 23 chr13 66774912 66775128 -53509184 + B3 SINE B2 2 216 0 4 1094 210 213 21 0 chr13 66775346 66775393 -53508919 + B1_Mus2 SINE Alu 100 147 0 4 1094 843 170 0 0 chr13 66775530 66775689 -53508623 - MurSatRep1 Unknown Unknown -1977 160 2 4 1094 5545 208 36 21 chr13 66775739 66777209 -53507103 + Lx4B LINE L1 5644 7052 -6 4 1094 490 381 30 16 chr13 66777256 66777586 -53506726 - MTE-int LTR MaLR -1219 361 2 4 1094 1047 105 28 0 chr13 66780031 66780174 -53504138 + B1_Mus2 SINE Alu 1 147 0 4 1094 445 255 89 6 chr13 66780214 66780372 -53503940 + L1_Mur3 LINE L1 921 1091 -6637 4 1094 205 278 18 44 chr13 66780461 66780574 -53503738 + (CAGAGA)n Simple_repeat Simple_repeat 4 113 0 4 1094 1208 259 53 72 chr13 66780706 66780967 -53503345 + L1_Mur3 LINE L1 1319 1595 -4285 4 1094 1441 89 5 16 chr13 66780967 66781160 -53503152 + B2_Mm1t SINE B2 2 192 -1 4 1094 1208 259 53 72 chr13 66781160 66781426 -53502886 + L1_Mur3 LINE L1 1596 1836 -4044 4 1094 262 298 0 35 chr13 66782199 66782286 -53502026 - MT2A LTR ERVL -376 157 74 4 1094 254 187 37 55 chr13 66782324 66782488 -53501824 + (TTAGGG)n Simple_repeat Simple_repeat 6 166 0 4 1094 34 72 0 0 chr13 66783571 66783640 -53500672 + AT_rich Low_complexity Low_complexity 1 69 0 4 1094 21 0 0 0 chr13 66783708 66783729 -53500583 + AT_rich Low_complexity Low_complexity 1 21 0 4 1094 26 64 0 0 chr13 66784111 66784158 -53500154 + AT_rich Low_complexity Low_complexity 1 47 0 4 1094 880 177 2 12 chr13 66785641 66785812 -53498500 - Lx2 LINE L1 -107 6951 6768 4 1094 371 111 0 0 chr13 66785812 66785875 -53498437 + Lx2 LINE L1 6935 6997 0 4 1094 281 308 56 0 chr13 66785875 66785886 -53498426 - Lx2 LINE L1 -205 6853 6840 4 1094 25 31 0 0 chr13 66785997 66786029 -53498283 + AT_rich Low_complexity Low_complexity 1 32 0 4 1094 1134 108 0 0 chr13 66787014 66787162 -53497150 - B1_Mus1 SINE Alu 0 148 1 4 1094 2220 35 8 8 chr13 66788440 66788699 -53495613 - L1Md_F3 LINE L1 -2 6582 6324 4 1094 34 24 0 0 chr13 66788796 66788837 -53495475 + AT_rich Low_complexity Low_complexity 1 41 0 4 1094 228 224 0 0 chr13 66788837 66788886 -53495426 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1094 23 0 0 0 chr13 66789626 66789649 -53494663 + AT_rich Low_complexity Low_complexity 1 23 0 4 1094 391 157 0 28 chr13 66789805 66789877 -53494435 - ID_B1 SINE B4 -76 148 79 4 1094 416 88 0 0 chr13 66789816 66789873 -53494439 - B1_Mus2 SINE Alu -89 58 2 4 1094 246 219 0 147 chr13 66789873 66789891 -53494421 - MT2B LTR ERVL -386 215 152 4 1094 14299 162 49 16 chr13 66790217 66791021 -53493291 + L1_Mur2 LINE L1 672 1517 -4360 4 1094 1927 133 116 0 chr13 66791021 66791314 -53492998 + ORR1A2 LTR MaLR 1 327 0 4 1094 14299 166 9 59 chr13 66791314 66791866 -53492446 + L1_Mur2 LINE L1 1518 2060 -3817 4 1094 303 28 0 0 chr13 66791866 66791902 -53492410 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1094 14299 166 9 59 chr13 66791902 66794126 -53490186 + L1_Mur2 LINE L1 2061 4133 -1744 4 1094 2142 82 23 0 chr13 66794120 66794423 -53489889 - MusHAL1 LINE L1 -733 1979 1670 4 1094 368 288 103 29 chr13 66794423 66794559 -53489753 + B1_Mur3 SINE Alu 4 149 0 4 1094 220 246 29 58 chr13 66794831 66794900 -53489412 + MIRb SINE MIR 19 85 -183 4 1094 1176 82 7 0 chr13 66795492 66795638 -53488674 + B1_Mm SINE Alu 1 147 0 4 1094 195 0 56 28 chr13 66795638 66795674 -53488638 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 4 1094 271 282 266 31 chr13 66795674 66795802 -53488510 + MIRb SINE MIR 34 191 -77 4 1094 2117 144 6 3 chr13 66796854 66797201 -53487111 - RLTR1 LTR ERV1 0 624 277 4 1094 245 374 78 6 chr13 66797270 66797604 -53486708 + L1_Mur3 LINE L1 167 524 -7204 4 1094 1082 117 0 0 chr13 66797675 66797820 -53486492 + B1_Mus2 SINE Alu 1 145 -2 4 1094 195 42 0 0 chr13 66797820 66797844 -53486468 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 4 1094 534 220 88 12 chr13 66797860 66798030 -53486282 + L1_Mur3 LINE L1 909 1091 -6637 4 1094 1288 244 61 48 chr13 66798359 66798819 -53485493 + L1_Mur3 LINE L1 1314 1779 -4101 4 1094 183 80 0 0 chr13 66800061 66800086 -53484226 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1094 420 207 39 58 chr13 66800240 66800394 -53483918 + (TTAGGG)n Simple_repeat Simple_repeat 4 154 0 4 1094 21 0 0 0 chr13 66801653 66801674 -53482638 + AT_rich Low_complexity Low_complexity 1 21 0 4 1094 1562 144 170 43 chr13 66802419 66802795 -53481517 - RLTR33 LTR ERVK -254 424 1 4 1094 723 207 57 0 chr13 66803236 66803376 -53480936 + B1_Mur3 SINE Alu 1 148 -1 4 1094 877 162 13 33 chr13 66803476 66803629 -53480683 - B1_Mur4 SINE Alu 0 150 1 4 1094 678 168 9 32 chr13 66804024 66804182 -53480130 + RLTR9C LTR ERVK 258 409 0 4 1094 872 152 54 12 chr13 66804182 66804303 -53480009 - MTB LTR MaLR -272 128 1 4 1094 351 258 75 47 chr13 66804404 66804510 -53479802 - PB1D10 SINE Alu -5 112 4 4 1094 972 120 0 0 chr13 66804563 66804713 -53479599 + (TTC)n Simple_repeat Simple_repeat 1 150 0 4 1094 180 0 0 0 chr13 66804781 66804801 -53479511 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1094 2339 81 0 0 chr13 66804835 66805144 -53479168 + L1_Mus4 LINE L1 6005 6313 -323 4 1094 251 100 60 0 chr13 66806195 66806245 -53478067 + (CCCTAA)n Simple_repeat Simple_repeat 6 58 0 4 1094 286 330 29 82 chr13 66806329 66806573 -53477739 + MT2A LTR ERVL 75 305 -228 5 1094 1338 236 61 37 chr13 66807668 66808178 -53476134 - L1_Mur3 LINE L1 -4045 1835 1314 5 1094 491 252 44 18 chr13 66808496 66808722 -53475590 - L1_Mur3 LINE L1 -6637 1091 860 5 1094 1155 168 9 9 chr13 66809298 66809508 -53474804 - Lx4B LINE L1 -159 6899 6690 5 1094 596 139 0 0 chr13 66809588 66809674 -53474638 + RLTR1B LTR ERV1 325 410 -102 5 1094 1019 146 13 0 chr13 66809686 66809844 -53474468 + RLTR1B LTR ERV1 353 512 0 5 1094 264 204 0 0 chr13 66809850 66809904 -53474408 + MMSAT4 Satellite Satellite 115 168 0 5 1094 257 350 49 35 chr13 66809870 66809942 -53474370 + MurSatRep1 Unknown Unknown 1759 2044 -88 5 1094 307 342 0 0 chr13 66809942 66810152 -53474160 + MMSAT4 Satellite Satellite 1 210 0 5 1094 1013 188 162 38 chr13 66810517 66810807 -53473505 - IAPEY3_LTR LTR ERVK -4 386 1 5 1094 319 278 9 93 chr13 66811488 66811595 -53472717 + B4 SINE B4 92 189 -103 5 1094 27 0 0 0 chr13 66811692 66811719 -53472593 + AT_rich Low_complexity Low_complexity 1 27 0 5 1094 641 286 41 27 chr13 66812779 66812998 -53471314 + LTRIS4 LTR ERV1 286 507 0 5 1094 456 19 0 0 chr13 66815086 66815139 -53469173 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1094 226 198 68 17 chr13 66815165 66815283 -53469029 + (TG)n Simple_repeat Simple_repeat 1 124 0 5 1094 477 0 0 0 chr13 66815338 66815391 -53468921 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1094 1336 14 0 7 chr13 66816026 66816174 -53468138 + B1_Mus2 SINE Alu 1 147 0 5 1094 261 57 0 0 chr13 66816174 66816209 -53468103 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1094 502 239 23 144 chr13 66816347 66816562 -53467750 + B2_Mm2 SINE B2 7 195 0 5 1094 617 250 13 7 chr13 66817374 66817527 -53466785 - Lx7 LINE L1 -808 6888 6735 5 1094 274 258 122 15 chr13 66817511 66817716 -53466596 + Lx9 LINE L1 7416 7642 -2 5 1094 21 0 0 0 chr13 66817721 66817742 -53466570 + AT_rich Low_complexity Low_complexity 1 21 0 5 1094 3790 107 5 7 chr13 66818412 66818976 -53465336 + L1_Mus2 LINE L1 4289 4851 -1032 5 1094 7326 75 7 30 chr13 66818975 66819526 -53464786 + L1_Mus2 LINE L1 5458 6010 -556 5 1094 1085 83 20 7 chr13 66819526 66819672 -53464640 + B1_Mus1 SINE Alu 1 148 0 5 1094 7326 64 6 38 chr13 66819672 66820258 -53464054 + L1_Mus2 LINE L1 6011 6563 -3 5 1094 1288 232 26 91 chr13 66820280 66820396 -53463916 + L1_Mur3 LINE L1 1965 2057 -3823 5 1094 369 0 0 0 chr13 66820396 66820437 -53463875 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1094 1288 232 26 91 chr13 66820437 66820780 -53463532 + L1_Mur3 LINE L1 2058 2394 -3486 5 1094 370 392 21 26 chr13 66820793 66821026 -53463286 + B4A SINE B4 60 291 -1 5 1094 476 89 0 12 chr13 66821060 66821140 -53463172 + (CA)n Simple_repeat Simple_repeat 2 80 0 5 1094 295 259 0 0 chr13 66821152 66821206 -53463106 + B4 SINE B4 229 282 -10 5 1094 382 326 97 48 chr13 66821366 66821675 -53462637 - ORR1E LTR MaLR -17 342 19 5 1094 423 0 0 0 chr13 66822215 66822262 -53462050 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1094 183 42 0 0 chr13 66822262 66822286 -53462026 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 1094 218 32 0 31 chr13 66822743 66822775 -53461537 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 5 1094 674 205 70 8 chr13 66822775 66822903 -53461409 - B1_Mur2 SINE Alu -13 136 1 5 1094 314 206 14 0 chr13 66822942 66823015 -53461297 - Lx2 LINE L1 -15 6982 6909 5 1094 1337 111 11 0 chr13 66823024 66823214 -53461098 - B2_Mm1t SINE B2 0 193 2 5 1094 3689 15 5 0 chr13 66823299 66823693 -53460619 - MTA_Mm LTR MaLR 0 396 1 5 1094 1177 196 13 13 chr13 66823789 66824021 -53460291 + MTC LTR MaLR 182 413 -8 5 1094 839 142 27 47 chr13 66824040 66824188 -53460124 - B1_Mur3 SINE Alu -1 148 4 5 1094 273 309 18 101 chr13 66824188 66824201 -53460111 - B4A SINE B4 -60 182 78 5 1094 346 313 130 0 chr13 66824219 66824334 -53459978 - RSINE1 SINE B4 -33 132 3 5 1094 647 231 0 0 chr13 66824422 66824530 -53459782 + PB1D9 SINE Alu 3 110 -10 5 1094 732 293 48 19 chr13 66824592 66824801 -53459511 + B3 SINE B2 2 216 0 5 1094 342 91 0 0 chr13 66824878 66824933 -53459379 + (ATTG)n Simple_repeat Simple_repeat 1 55 0 5 1094 821 181 14 7 chr13 66824933 66825072 -53459240 - B1_Mus1 SINE Alu -6 142 3 5 1094 359 347 78 67 chr13 66825175 66825462 -53458850 - MLT1G1 LTR MaLR -235 344 90 5 1094 195 430 0 0 chr13 66825756 66825856 -53458456 + L2a LINE L2 3046 3145 -281 5 1094 1216 205 65 90 chr13 66825974 66826450 -53457862 - MT2A LTR ERVL 0 601 6 5 1094 564 282 8 25 chr13 66826511 66826631 -53457681 + RSINE1 SINE B4 18 135 -30 5 1094 825 232 19 72 chr13 66826825 66827034 -53457278 + B3A SINE B2 1 198 0 5 1094 467 231 207 0 chr13 66827056 66827177 -53457135 + B1_Mur2 SINE Alu 3 148 -1 5 1094 285 293 0 39 chr13 66827190 66827268 -53457044 + G-rich Low_complexity Low_complexity 4 78 0 5 1094 2431 182 75 6 chr13 66827308 66827790 -53456522 + RLTR11A2 LTR ERVK 1 515 -12 5 1094 1091 171 131 0 chr13 66827972 66828171 -53456141 - URR1A DNA MER1_type -1 225 1 5 1094 346 172 0 15 chr13 66828171 66828236 -53456076 + RLTR18B LTR ERVK 38 101 -411 5 1094 2471 170 69 77 chr13 66828240 66828375 -53455937 - RLTR18-int LTR ERVK -850 4511 4373 5 1094 770 175 265 0 chr13 66828375 66828541 -53455771 + B3 SINE B2 2 211 -5 5 1094 2471 177 159 47 chr13 66828541 66829314 -53454998 - RLTR18-int LTR ERVK -989 4372 3518 5 1094 915 148 21 0 chr13 66829314 66829456 -53454856 + B1_Mur4 SINE Alu 1 145 -5 5 1094 1247 71 0 17 chr13 66829472 66829644 -53454668 + B2_Mm2 SINE B2 2 170 -25 5 1094 3019 200 30 25 chr13 66829660 66830302 -53454010 - RLTR18-int LTR ERVK -1811 3550 2906 5 1094 2143 72 0 0 chr13 66830304 66830580 -53453732 + RLTR10A LTR ERVK 1 276 -135 5 1094 1771 159 7 0 chr13 66830581 66830857 -53453455 + RLTR27 LTR ERVK 32 309 0 5 1094 764 74 11 16 chr13 66830875 66831019 -53453293 - ORR1A3 LTR MaLR -4 390 224 5 1094 318 157 0 0 chr13 66831094 66831145 -53453167 - U2 snRNA snRNA -137 51 1 5 1094 1001 99 6 38 chr13 66831426 66831462 -53452850 - MTB LTR MaLR -247 153 122 5 1094 2432 129 16 54 chr13 66831462 66831887 -53452425 + RLTR9E LTR ERVK 1 409 0 5 1094 1001 99 6 38 chr13 66831887 66832008 -53452304 - MTB LTR MaLR -279 121 1 5 1094 387 245 66 38 chr13 66832109 66832215 -53452097 - PB1D10 SINE Alu -5 112 4 5 1094 1212 88 0 0 chr13 66832265 66832436 -53451876 + (TTC)n Simple_repeat Simple_repeat 1 171 0 5 1094 392 171 0 12 chr13 66832436 66832519 -53451793 + CT-rich Low_complexity Low_complexity 2 83 0 5 1094 4306 107 39 3 chr13 66832629 66833239 -53451073 + L1_Mus4 LINE L1 6005 6636 0 5 1094 31 26 0 0 chr13 66833314 66833352 -53450960 + AT_rich Low_complexity Low_complexity 1 38 0 5 1094 251 277 68 102 chr13 66833513 66833718 -53450594 - RLTR25A LTR ERVK -9 1094 897 5 1094 281 232 51 40 chr13 66833783 66833958 -53450354 + (CA)n Simple_repeat Simple_repeat 1 177 0 5 1094 4432 113 3 2 chr13 66835346 66835932 -53448380 - LTRIS_Mus LTR ERV1 0 587 1 5 1094 595 282 32 35 chr13 66836669 66836893 -53447419 - LTRIS5 LTR ERV1 -7 512 237 5 1094 256 130 29 0 chr13 66837484 66837553 -53446759 + G-rich Low_complexity Low_complexity 1 71 0 5 1094 27 0 0 0 chr13 66837963 66837990 -53446322 + AT_rich Low_complexity Low_complexity 1 27 0 5 1094 369 220 63 99 chr13 66838087 66838198 -53446114 - B4 SINE B4 -103 189 83 5 1094 213 39 0 0 chr13 66838421 66838447 -53445865 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1094 546 16 0 0 chr13 66838458 66838521 -53445791 + (TTTA)n Simple_repeat Simple_repeat 3 65 0 5 1094 1214 30 0 0 chr13 66838521 66838656 -53445656 - B1_Mus2 SINE Alu -11 136 2 5 1094 233 295 32 24 chr13 66839452 66839577 -53444735 - MMSAT4 Satellite Satellite 0 168 43 5 1094 316 287 24 24 chr13 66839615 66839740 -53444572 - MMSAT4 Satellite Satellite 0 168 44 5 1094 21 36 0 0 chr13 66839744 66839772 -53444540 + AT_rich Low_complexity Low_complexity 1 28 0 5 1094 426 311 45 40 chr13 66839793 66839991 -53444321 - MurSatRep1 Unknown Unknown -88 2049 1851 5 1094 308 305 22 30 chr13 66839881 66840016 -53444296 - MMSAT4 Satellite Satellite 0 168 35 5 1094 378 269 23 23 chr13 66840052 66840263 -53444049 - MMSAT4 Satellite Satellite -5 211 1 5 1094 4778 188 31 46 chr13 66840298 66840504 -53443808 - MurSatRep1 Unknown Unknown -1 2136 1924 5 1094 1182 95 0 0 chr13 66840504 66840652 -53443660 - B1_Mus1 SINE Alu 0 148 1 5 1094 4778 188 31 46 chr13 66840652 66841523 -53442789 - MurSatRep1 Unknown Unknown -214 1923 1075 5 1094 261 83 0 0 chr13 66841523 66841559 -53442753 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 5 1094 831 88 0 272 chr13 66841568 66841770 -53442542 - B1_Mus1 SINE Alu 0 148 2 5 1094 5149 196 23 26 chr13 66841770 66842863 -53441449 - MurSatRep1 Unknown Unknown -1047 1090 2 5 1094 210 213 21 0 chr13 66843386 66843433 -53440879 + B1_Mus2 SINE Alu 100 147 0 5 1094 27 29 0 0 chr13 66843433 66843467 -53440845 + AT_rich Low_complexity Low_complexity 1 34 0 5 1094 238 35 0 0 chr13 66843618 66843647 -53440665 + Lx4B LINE L1 6353 6381 -677 5 1094 1145 173 9 9 chr13 66843668 66843878 -53440434 + Lx4B LINE L1 6690 6899 -159 5 1094 237 316 121 28 chr13 66844206 66844421 -53439891 + L1_Mur3 LINE L1 48 282 -7446 5 1094 473 257 44 18 chr13 66844454 66844680 -53439632 + L1_Mur3 LINE L1 860 1091 -6637 5 1094 1417 234 59 37 chr13 66844997 66845508 -53438804 + L1_Mur3 LINE L1 1314 1835 -4045 5 136 360 333 25 78 chr13 66846600 66846844 -53437468 - MT2A LTR ERVL -228 305 75 5 1095 22 35 0 0 chr13 66846853 66846882 -53437430 + AT_rich Low_complexity Low_complexity 1 29 0 5 1095 251 100 60 0 chr13 66846931 66846981 -53437331 + (TTAGGG)n Simple_repeat Simple_repeat 6 58 0 5 1095 2304 91 0 0 chr13 66848035 66848344 -53435968 - L1_Mus4 LINE L1 -323 6313 6005 5 1095 198 0 0 0 chr13 66848378 66848400 -53435912 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1095 339 25 0 0 chr13 66848464 66848504 -53435808 + (GGA)n Simple_repeat Simple_repeat 1 40 0 5 1095 1538 20 0 12 chr13 66848504 66848762 -53435550 + (GAA)n Simple_repeat Simple_repeat 1 255 0 5 1095 351 258 75 47 chr13 66848808 66848914 -53435398 + PB1D10 SINE Alu 4 112 -5 5 1095 869 180 42 0 chr13 66849015 66849136 -53435176 + MTB LTR MaLR 1 128 -272 5 1095 725 148 9 32 chr13 66849136 66849296 -53435016 - RLTR9C LTR ERVK 0 409 256 5 1095 838 168 14 34 chr13 66849683 66849831 -53434481 + B1_Mur4 SINE Alu 1 145 -5 6 1095 768 191 57 0 chr13 66849935 66850076 -53434236 - B1_Mur3 SINE Alu 0 149 1 6 1095 1562 144 170 43 chr13 66850520 66850896 -53433416 + RLTR33 LTR ERVK 1 424 -254 6 1095 21 0 0 0 chr13 66851642 66851663 -53432649 + AT_rich Low_complexity Low_complexity 1 21 0 6 1095 420 207 39 58 chr13 66852893 66853047 -53431265 + (CCCTAA)n Simple_repeat Simple_repeat 4 154 0 6 1095 281 289 7 75 chr13 66853086 66853232 -53431080 + MT2A LTR ERVL 74 209 -324 6 1095 1429 254 52 46 chr13 66854399 66854919 -53429393 - L1_Mur3 LINE L1 -4044 1836 1314 6 1095 209 252 27 45 chr13 66855046 66855158 -53429154 + (TCTCTG)n Simple_repeat Simple_repeat 4 113 0 6 1095 511 226 88 12 chr13 66855248 66855418 -53428894 - L1_Mur3 LINE L1 -6637 1091 909 6 1095 195 42 0 0 chr13 66855434 66855458 -53428854 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 6 1095 1071 124 0 0 chr13 66855458 66855603 -53428709 - B1_Mus2 SINE Alu -2 145 1 6 1095 227 378 76 9 chr13 66855674 66856122 -53428190 - L1_Mur3 LINE L1 -7204 524 47 6 1095 655 337 82 53 chr13 66857728 66858069 -53426243 + ORR1B1 LTR MaLR 53 403 -16 6 1095 464 365 38 26 chr13 66858095 66858424 -53425888 + ORR1B1-int LTR MaLR 2 360 -1220 6 1095 236 347 15 11 chr13 66858526 66858751 -53425561 + MMSAT4 Satellite Satellite 1 225 0 6 1095 269 307 7 62 chr13 66858865 66858900 -53425412 + MMSAT4 Satellite Satellite 31 58 -110 6 1095 2407 155 19 24 chr13 66858900 66859310 -53425002 + RLTR9E LTR ERVK 2 409 0 6 1095 269 307 7 62 chr13 66859310 66859420 -53424892 + MMSAT4 Satellite Satellite 59 168 0 6 1095 1501 229 11 40 chr13 66859478 66859850 -53424462 + ORR1B1 LTR MaLR 1 394 0 6 1095 852 160 273 3 chr13 66859850 66860214 -53424098 + ORR1B1-int LTR MaLR 1 462 -1501 6 1095 988 121 0 0 chr13 66860221 66860362 -53423950 + B1_Mus2 SINE Alu 6 146 -1 6 1095 2055 285 86 75 chr13 66860361 66860391 -53423921 + ORR1B1-int LTR MaLR 421 452 -1511 6 1095 1107 100 0 22 chr13 66860391 66860575 -53423737 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1095 2188 238 80 47 chr13 66860575 66861891 -53422421 + ORR1B1-int LTR MaLR 453 1747 -216 6 1095 792 128 16 0 chr13 66861905 66862030 -53422282 + B1_Mus1 SINE Alu 1 127 -21 6 1095 1615 216 16 72 chr13 66862026 66862634 -53421678 + ORR1B1 LTR MaLR 15 386 -8 6 1095 311 309 46 7 chr13 66863431 66863584 -53420728 + MurSatRep1 Unknown Unknown 1891 2049 -88 6 1095 8072 223 36 46 chr13 66863923 66866181 -53418131 - L1_Mur3 LINE L1 -1568 4312 2059 6 1095 558 0 0 0 chr13 66866181 66866243 -53418069 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1095 8072 223 36 46 chr13 66866243 66866356 -53417956 - L1_Mur3 LINE L1 -3822 2058 1965 6 1095 7000 71 22 36 chr13 66866380 66866961 -53417351 - L1_Mus2 LINE L1 0 6566 6011 6 1095 1024 112 28 7 chr13 66866961 66867105 -53417207 - B1_Mus1 SINE Alu -1 147 1 6 1095 7000 96 21 19 chr13 66867105 66867999 -53416313 - L1_Mus2 LINE L1 -556 6010 5105 6 1095 719 194 119 95 chr13 66867999 66868471 -53415841 - RLTR6_Mm LTR ERV1 -48 606 1 6 1095 19257 46 12 17 chr13 66868471 66870932 -53413380 - MMVL30-int LTR ERV1 0 3698 960 6 1095 5629 46 3 7 chr13 66871019 66871704 -53412608 - MMVL30-int LTR ERV1 -2245 1453 772 6 1095 398 165 151 45 chr13 66872052 66872204 -53412108 - MMVL30-int LTR ERV1 -7023 533 256 6 1095 1672 77 98 114 chr13 66872208 66872450 -53411862 - MMERGLN-int LTR ERV1 -2951 747 288 6 1095 232 118 0 0 chr13 66872450 66872484 -53411828 - tRNA-Arg-AGG tRNA tRNA 0 76 43 6 1095 1672 77 98 114 chr13 66872484 66872602 -53411710 - MMERGLN-int LTR ERV1 -2951 287 60 6 1095 790 193 119 91 chr13 66872660 66873113 -53411199 - RLTR6_Mm LTR ERV1 -65 589 1 6 1095 5343 115 0 3 chr13 66873113 66873896 -53410416 - L1_Mm LINE L1 -799 5084 4304 6 1095 303 214 91 10 chr13 66873902 66874001 -53410311 + MTD LTR MaLR 298 404 -15 6 1095 22 0 0 0 chr13 66874580 66874602 -53409710 + AT_rich Low_complexity Low_complexity 1 22 0 6 1095 344 256 0 0 chr13 66874797 66874879 -53409433 + Lx7 LINE L1 6735 6816 -880 6 1095 387 0 0 0 chr13 66875547 66875590 -53408722 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 1095 1394 259 46 16 chr13 66875592 66875980 -53408332 + Lx7 LINE L1 6812 7211 -485 6 1095 622 211 0 0 chr13 66876238 66876361 -53407951 + Lx7 LINE L1 7236 7358 -338 6 1095 228 312 45 75 chr13 66876385 66876718 -53407594 + Lx7 LINE L1 7329 7651 -45 6 1095 24 0 0 0 chr13 66877437 66877461 -53406851 + AT_rich Low_complexity Low_complexity 1 24 0 6 1095 2128 144 78 11 chr13 66877477 66877849 -53406463 - Lx2B LINE L1 -5 6995 6599 6 1095 1864 168 15 6 chr13 66877858 66878188 -53406124 - Lx2B LINE L1 -629 6371 6039 6 1095 1443 124 13 9 chr13 66878188 66878415 -53405897 + RMER16-int LTR ERVK 1762 1989 -3417 6 1095 1090 165 24 30 chr13 66878424 66878691 -53405621 - ORR1A3-int LTR MaLR -449 1514 1325 6 1095 253 254 0 0 chr13 66879609 66879664 -53404648 - RLTR22_Mur LTR ERVK -1792 56 2 6 1095 1279 61 19 0 chr13 66879793 66880017 -53404295 + (TTTC)n Simple_repeat Simple_repeat 1 228 0 6 1095 335 254 0 0 chr13 66880147 66880214 -53404098 - B2_Mm2 SINE B2 -122 73 7 6 1095 21 57 0 0 chr13 66880497 66880532 -53403780 + AT_rich Low_complexity Low_complexity 1 35 0 6 1095 200 246 62 16 chr13 66880974 66881102 -53403210 + (CA)n Simple_repeat Simple_repeat 2 135 0 6 1095 34373 27 3 8 chr13 66882980 66886614 -53397698 + L1Md_T LINE L1 1820 5461 -422 6 1095 1684 27 0 16 chr13 66886614 66886805 -53397507 + B2_Mm1a SINE B2 2 189 -4 6 1095 34373 29 3 5 chr13 66886805 66887513 -53396799 + L1Md_T LINE L1 5462 6144 -438 6 1095 2548 249 39 109 chr13 66888779 66890459 -53393853 - ORR1B1-int LTR MaLR 0 1963 15 6 1095 484 306 78 75 chr13 66890336 66890604 -53393708 - MT2B LTR ERVL -332 269 1 6 1095 475 321 52 62 chr13 66890604 66890828 -53393484 - ORR1B1-int LTR MaLR -1286 677 457 6 1095 390 42 0 0 chr13 66890829 66890877 -53393435 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1095 596 70 0 11 chr13 66890875 66890962 -53393350 + (TTCC)n Simple_repeat Simple_repeat 2 87 0 6 1095 1022 94 0 0 chr13 66890962 66891100 -53393212 - B1_Mus1 SINE Alu -1 147 10 6 1095 1191 199 272 3 chr13 66891107 66891474 -53392838 - ORR1B1-int LTR MaLR -1497 466 1 6 1095 1596 226 8 42 chr13 66891474 66891853 -53392459 - ORR1B1 LTR MaLR 0 394 29 6 1095 2317 148 22 17 chr13 66892015 66892421 -53391891 - RLTR9E LTR ERVK 0 409 2 6 1095 242 306 29 22 chr13 66892654 66892791 -53391521 - MMSAT4 Satellite Satellite 0 168 31 6 1095 258 293 29 16 chr13 66892988 66893195 -53391117 - MMSAT4 Satellite Satellite 0 209 1 6 1095 270 289 26 26 chr13 66893426 66893543 -53390769 - MMSAT4 Satellite Satellite -22 146 30 6 1095 449 324 27 27 chr13 66893485 66893786 -53390526 - MurSatRep1 Unknown Unknown -90 2047 1747 6 1095 455 260 24 24 chr13 66893740 66894460 -53389852 - MMSAT4 Satellite Satellite 0 720 1 6 1095 330 332 20 15 chr13 66894323 66894519 -53389793 - MurSatRep1 Unknown Unknown -88 2049 1853 6 1095 5897 196 80 20 chr13 66894494 66896511 -53387801 - MurSatRep1 Unknown Unknown 0 2137 1 6 1095 635 159 0 0 chr13 66896609 66896722 -53387590 - MurSatRep1 Unknown Unknown -2024 113 1 6 1095 348 390 23 28 chr13 66896818 66897034 -53387278 + B3 SINE B2 2 216 0 6 1095 840 175 0 0 chr13 66897437 66897597 -53386715 - MurSatRep1 Unknown Unknown -1977 160 1 6 1095 434 191 16 50 chr13 66897646 66897767 -53386545 + Lx4B LINE L1 6336 6452 -606 6 1095 5357 214 34 19 chr13 66897767 66899123 -53385189 + Lx4B LINE L1 5677 7052 -6 6 1095 464 372 36 23 chr13 66899170 66899500 -53384812 - MTD-int LTR MaLR -1219 361 2 6 1095 654 334 82 53 chr13 66899526 66899867 -53384445 - MTD LTR MaLR -16 403 53 6 1095 927 126 28 0 chr13 66901989 66902132 -53382180 + B1_Mus2 SINE Alu 1 147 0 6 1095 455 244 81 6 chr13 66902158 66902331 -53381981 + L1_Mur3 LINE L1 906 1091 -6637 6 1095 1138 268 42 46 chr13 66902665 66903185 -53381127 + L1_Mur3 LINE L1 1319 1836 -4044 6 1095 266 217 16 16 chr13 66903982 66904043 -53380269 - MT2A LTR ERVL -401 132 72 6 1095 434 208 43 55 chr13 66904048 66904211 -53380101 + (TTAGGG)n Simple_repeat Simple_repeat 6 166 0 6 1095 5310 32 0 2 chr13 66904729 66905354 -53378958 - L1Md_T LINE L1 -2 6580 5957 6 1095 264 30 0 0 chr13 66905701 66905734 -53378578 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1095 28 86 0 0 chr13 66906303 66906373 -53377939 + AT_rich Low_complexity Low_complexity 1 70 0 6 1095 21 0 0 0 chr13 66906442 66906463 -53377849 + AT_rich Low_complexity Low_complexity 1 21 0 6 1095 24 0 0 0 chr13 66906703 66906727 -53377585 + AT_rich Low_complexity Low_complexity 1 24 0 6 1095 1624 149 165 37 chr13 66907212 66907588 -53376724 - RLTR33 LTR ERVK -254 424 1 6 1095 278 258 123 47 chr13 66907881 66907987 -53376325 - B1_Mus2 SINE Alu -12 135 22 6 1095 351 0 0 0 chr13 66908032 66908071 -53376241 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1095 23 86 0 0 chr13 66908119 66908177 -53376135 + AT_rich Low_complexity Low_complexity 1 58 0 6 1095 308 248 43 0 chr13 66908180 66908297 -53376015 + (TG)n Simple_repeat Simple_repeat 1 122 0 6 1095 237 139 0 0 chr13 66908378 66908421 -53375891 + (TATG)n Simple_repeat Simple_repeat 4 46 0 6 1095 463 328 60 21 chr13 66909468 66909848 -53374464 + Lx9 LINE L1 7202 7596 -48 6 1095 26 64 0 0 chr13 66911056 66911103 -53373209 + AT_rich Low_complexity Low_complexity 1 47 0 6 1095 859 166 0 12 chr13 66912587 66912752 -53371560 - Lx2 LINE L1 -67 6930 6768 6 1095 266 119 68 0 chr13 66912758 66912817 -53371495 + Lx2 LINE L1 6935 6997 0 6 1095 29 28 0 0 chr13 66912938 66912974 -53371338 + AT_rich Low_complexity Low_complexity 1 36 0 6 1095 964 135 0 0 chr13 66913937 66914078 -53370234 - B1_Mus1 SINE Alu -5 143 3 6 1095 2044 43 8 4 chr13 66915357 66915615 -53368697 - L1Md_F3 LINE L1 -2 6582 6324 6 1095 36 23 0 0 chr13 66915720 66915763 -53368549 + AT_rich Low_complexity Low_complexity 1 43 0 6 1095 207 114 0 0 chr13 66915763 66915798 -53368514 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1095 23 0 0 0 chr13 66916552 66916575 -53367737 + AT_rich Low_complexity Low_complexity 1 23 0 6 1095 369 191 0 14 chr13 66916734 66916803 -53367509 - ID_B1 SINE B4 -78 146 79 6 1095 408 88 0 0 chr13 66916742 66916799 -53367513 - B1_Mus2 SINE Alu -89 58 2 6 1095 242 219 0 147 chr13 66916799 66916817 -53367495 - MT2B LTR ERVL -386 215 152 6 1095 13507 162 35 8 chr13 66917140 66917956 -53366356 + L1_Mur2 LINE L1 672 1517 -4360 6 1095 1822 133 112 0 chr13 66917956 66918250 -53366062 + ORR1A2 LTR MaLR 1 327 0 6 1095 13507 166 16 19 chr13 66918250 66918802 -53365510 + L1_Mur2 LINE L1 1518 2060 -3817 6 1095 198 0 0 0 chr13 66918802 66918824 -53365488 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1095 13507 166 16 19 chr13 66918824 66919657 -53364655 + L1_Mur2 LINE L1 2061 2881 -2996 6 1095 606 28 0 0 chr13 66919657 66919729 -53364583 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 1095 567 0 0 0 chr13 66919730 66919793 -53364519 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 6 1095 13507 166 16 19 chr13 66919793 66921033 -53363279 + L1_Mur2 LINE L1 2882 4130 -1747 6 1095 1930 86 26 0 chr13 66921027 66921329 -53362983 - MusHAL1 LINE L1 -733 1979 1670 6 1095 373 288 103 29 chr13 66921329 66921465 -53362847 + B1_Mur3 SINE Alu 4 149 0 6 1095 238 296 0 0 chr13 66921657 66921711 -53362601 + ID4_ SINE ID 30 83 0 6 1095 223 246 29 58 chr13 66921737 66921806 -53362506 + MIRb SINE MIR 19 85 -183 6 1095 27 0 0 0 chr13 66922139 66922166 -53362146 + AT_rich Low_complexity Low_complexity 1 27 0 6 1095 1144 68 7 0 chr13 66922400 66922546 -53361766 + B1_Mm SINE Alu 1 147 0 6 1095 191 61 30 0 chr13 66922549 66922582 -53361730 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1095 259 296 266 23 chr13 66922583 66922711 -53361601 + MIR SINE MIR 29 187 -75 7 1095 2174 172 41 23 chr13 66923763 66924225 -53360087 - RLTR1 LTR ERV1 0 624 132 7 1095 599 280 37 31 chr13 66925044 66925271 -53359041 + LTRIS4 LTR ERV1 280 587 0 7 1095 252 269 116 61 chr13 66927519 66927717 -53356595 + RLTR25B LTR ERVK 815 1023 -5 7 1095 21 57 0 0 chr13 66927875 66927910 -53356402 + AT_rich Low_complexity Low_complexity 1 35 0 7 1095 243 328 0 0 chr13 66928194 66928261 -53356051 + B3A SINE B2 7 73 -125 7 1095 849 20 0 0 chr13 66928390 66928489 -53355823 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 7 1095 255 254 0 0 chr13 66928626 66928681 -53355631 + RLTR22_Mur LTR ERVK 2 56 -1792 7 1095 1522 183 6 39 chr13 66929574 66929904 -53354408 + ORR1A3-int LTR MaLR 1196 1514 -449 7 1095 1317 124 13 9 chr13 66929913 66930140 -53354172 - RMER16-int LTR ERVK -3417 1989 1762 7 1095 1805 155 15 6 chr13 66930140 66930470 -53353842 + Lx2B LINE L1 6039 6371 -629 7 1095 1901 149 78 11 chr13 66930479 66930851 -53353461 + Lx2B LINE L1 6599 6995 -5 7 1095 189 0 0 0 chr13 66930944 66930965 -53353347 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1095 202 158 0 26 chr13 66931660 66931699 -53352613 + (TTA)n Simple_repeat Simple_repeat 3 40 0 7 1095 568 211 0 0 chr13 66931919 66932042 -53352270 - Lx7 LINE L1 -338 7358 7236 7 1095 1358 239 11 17 chr13 66932345 66932698 -53351614 - Lx7 LINE L1 -544 7152 6802 7 1095 230 236 0 0 chr13 66933391 66933446 -53350866 - Lx7 LINE L1 -897 6799 6745 7 1095 22 0 0 0 chr13 66933651 66933673 -53350639 + AT_rich Low_complexity Low_complexity 1 22 0 7 1095 289 207 114 3 chr13 66934244 66934352 -53349960 - MTD LTR MaLR 0 421 298 7 1095 9468 108 10 3 chr13 66934358 66935838 -53348474 + L1_Mm LINE L1 4304 5793 -90 7 1095 34080 45 0 3 chr13 66935839 66941301 -53343011 + L1Md_T LINE L1 50 5589 -297 7 1095 8413 37 0 0 chr13 66941301 66942297 -53342015 + L1Md_T LINE L1 5590 6585 0 7 1095 5367 81 12 44 chr13 66942297 66942525 -53341787 + L1_Mus2 LINE L1 5783 6004 -562 7 1095 1007 112 0 7 chr13 66942525 66942669 -53341643 + B1_Mus1 SINE Alu 1 143 -5 7 1095 5367 81 12 44 chr13 66942669 66943250 -53341062 + L1_Mus2 LINE L1 6005 6566 0 7 1095 3811 231 27 57 chr13 66943275 66943388 -53340924 + L1_Mur3 LINE L1 1965 2058 -3822 7 1095 324 0 0 0 chr13 66943388 66943424 -53340888 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1095 7003 227 35 45 chr13 66943424 66945684 -53338628 + L1_Mur3 LINE L1 2059 4312 -1568 7 1095 270 303 46 7 chr13 66946019 66946172 -53338140 - MurSatRep1 Unknown Unknown -88 2049 1891 7 1095 4896 227 103 106 chr13 66946969 66949014 -53335298 - ORR1B1-int LTR MaLR 0 1792 15 7 1095 540 30 0 0 chr13 66949014 66949080 -53335232 + (TC)n Simple_repeat Simple_repeat 1 66 0 7 1095 4896 205 141 99 chr13 66949080 66949121 -53335191 - ORR1B1-int LTR MaLR -1500 463 463 7 1095 1034 117 0 14 chr13 66949121 66949268 -53335044 - B1_Mus2 SINE Alu -1 146 2 7 1095 4896 205 141 99 chr13 66949268 66949636 -53334676 - ORR1B1-int LTR MaLR -1501 462 1 7 1095 1605 229 8 42 chr13 66949636 66950015 -53334297 - ORR1B1 LTR MaLR 0 394 29 7 1095 229 303 0 0 chr13 66950059 66950135 -53334177 - MMSAT4 Satellite Satellite -76 92 17 7 1095 2288 147 20 25 chr13 66950177 66950582 -53333730 - RLTR9E LTR ERVK 0 409 7 7 1095 263 281 30 17 chr13 66951161 66951361 -53332951 - MMSAT4 Satellite Satellite -7 202 1 7 1095 503 257 9 9 chr13 66951660 66952052 -53332260 - MMSAT4 Satellite Satellite 0 392 1 7 1095 520 266 67 43 chr13 66951994 66952293 -53332019 - MurSatRep1 Unknown Unknown 0 2137 1832 7 1095 519 265 5 5 chr13 66952164 66952556 -53331756 - MMSAT4 Satellite Satellite 0 392 1 7 1095 520 266 67 43 chr13 66952498 66952797 -53331515 - MurSatRep1 Unknown Unknown 0 2137 1832 7 1095 519 261 10 10 chr13 66952668 66953563 -53330749 - MMSAT4 Satellite Satellite 0 895 1 7 1095 470 289 65 36 chr13 66953506 66953676 -53330636 - MurSatRep1 Unknown Unknown 0 2137 1921 7 1095 345 311 0 0 chr13 66953676 66953808 -53330504 - MMSAT4 Satellite Satellite 0 168 37 7 1095 470 289 65 36 chr13 66953808 66953867 -53330445 - MurSatRep1 Unknown Unknown 0 1920 1843 7 1095 5801 206 47 28 chr13 66953842 66953932 -53330380 - MurSatRep1 Unknown Unknown 0 2137 2064 7 1095 2941 50 0 0 chr13 66953932 66954292 -53330020 + L1Md_A LINE L1 6223 6582 0 7 1095 5801 206 47 28 chr13 66954292 66954412 -53329900 - MurSatRep1 Unknown Unknown -74 2063 1947 7 1095 459 0 0 0 chr13 66954412 66954463 -53329849 + (TA)n Simple_repeat Simple_repeat 1 51 0 7 1095 5801 206 47 28 chr13 66954463 66955030 -53329282 - MurSatRep1 Unknown Unknown -191 1946 1351 7 1095 537 16 0 0 chr13 66955030 66955092 -53329220 + (TA)n Simple_repeat Simple_repeat 1 62 0 7 1095 5801 202 86 23 chr13 66955092 66956357 -53327955 - MurSatRep1 Unknown Unknown -787 1350 1 7 1095 276 365 19 23 chr13 66956453 66956669 -53327643 + B3 SINE B2 2 216 0 7 1095 210 213 21 0 chr13 66956887 66956934 -53327378 + B1_Mus2 SINE Alu 100 147 0 7 1095 823 176 0 0 chr13 66957071 66957230 -53327082 - MurSatRep1 Unknown Unknown -1977 160 2 7 1095 5464 207 36 20 chr13 66957280 66958749 -53325563 + Lx4B LINE L1 5644 7052 -6 7 1095 469 380 29 16 chr13 66958796 66959126 -53325186 - MTE-int LTR MaLR -1219 361 2 7 1095 993 105 28 0 chr13 66961350 66961493 -53322819 + B1_Mus2 SINE Alu 1 147 0 7 1095 400 261 89 6 chr13 66961533 66961691 -53322621 + L1_Mur3 LINE L1 921 1091 -6637 7 1095 1034 259 53 72 chr13 66962025 66962286 -53322026 + L1_Mur3 LINE L1 1319 1595 -4285 7 1095 1327 95 5 16 chr13 66962286 66962479 -53321833 + B2_Mm1t SINE B2 2 192 -1 7 1095 1034 259 53 72 chr13 66962479 66962745 -53321567 + L1_Mur3 LINE L1 1596 1836 -4044 7 1095 260 301 0 35 chr13 66963512 66963598 -53320714 - MT2A LTR ERVL -376 157 75 7 1095 192 155 0 90 chr13 66963638 66963716 -53320596 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 7 1095 244 254 0 27 chr13 66963729 66963802 -53320510 + (TTAGGG)n Simple_repeat Simple_repeat 6 76 0 7 1095 1372 57 73 0 chr13 66964273 66964290 -53320022 - B2_Mm1t SINE B2 -2 191 162 7 1095 207 0 0 0 chr13 66964290 66964313 -53319999 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 7 1095 1372 57 73 0 chr13 66964313 66964472 -53319840 - B2_Mm1t SINE B2 -32 161 3 7 1095 29 84 0 0 chr13 66965092 66965163 -53319149 + AT_rich Low_complexity Low_complexity 1 71 0 7 1095 21 0 0 0 chr13 66965232 66965253 -53319059 + AT_rich Low_complexity Low_complexity 1 21 0 7 1095 243 306 61 10 chr13 66966635 66966734 -53317578 + B1_Mus1 SINE Alu 9 112 -36 7 1095 24 0 0 0 chr13 66967232 66967256 -53317056 + AT_rich Low_complexity Low_complexity 1 24 0 7 1095 1549 165 167 36 chr13 66967727 66968116 -53316196 - RLTR33 LTR ERVK -238 440 1 7 1095 293 248 108 58 chr13 66968396 66968516 -53315796 - B1_Mur1 SINE Alu -1 148 23 7 1095 270 56 0 0 chr13 66968560 66968596 -53315716 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1095 27 62 0 0 chr13 66968655 66968703 -53315609 + AT_rich Low_complexity Low_complexity 1 48 0 7 1095 317 248 43 0 chr13 66968706 66968823 -53315489 + (TG)n Simple_repeat Simple_repeat 1 122 0 7 1095 255 157 0 0 chr13 66968902 66968953 -53315359 + (TATG)n Simple_repeat Simple_repeat 4 54 0 7 1095 182 182 45 0 chr13 66969916 66969960 -53314352 + L3 LINE CR1 2526 2571 -1918 7 1095 458 315 73 28 chr13 66969999 66970397 -53313915 + Lx9 LINE L1 7202 7617 -27 7 1095 26 64 0 0 chr13 66971571 66971618 -53312694 + AT_rich Low_complexity Low_complexity 1 47 0 7 1095 866 153 0 12 chr13 66973102 66973267 -53311045 - Lx2 LINE L1 -67 6930 6768 7 1095 277 150 0 0 chr13 66973273 66973333 -53310979 + Lx2 LINE L1 6935 6994 -3 7 1095 24 32 0 0 chr13 66973477 66973508 -53310804 + AT_rich Low_complexity Low_complexity 1 31 0 7 1095 180 158 0 0 chr13 66974952 66974990 -53309322 + A-rich Low_complexity Low_complexity 2 39 0 7 1095 192 111 0 0 chr13 66975683 66975719 -53308593 + (A)n Simple_repeat Simple_repeat 1 36 0 7 1095 272 189 0 13 chr13 66976032 66976107 -53308205 + CT-rich Low_complexity Low_complexity 2 75 0 7 1095 272 137 14 14 chr13 66976776 66976850 -53307462 - RLTR10 LTR ERVK -46 344 271 7 1095 27 0 0 0 chr13 66977007 66977034 -53307278 + AT_rich Low_complexity Low_complexity 1 27 0 7 136 7798 41 5 0 chr13 66977040 66978023 -53306289 - L1Md_F2 LINE L1 0 6582 5595 7 1096 5368 54 0 4 chr13 66978020 66978725 -53305587 + L1Md_F2 LINE L1 4883 5584 -299 7 1096 1232 87 76 0 chr13 66978798 66978982 -53305330 + ORR1A2 LTR MaLR 122 319 -8 7 1096 2464 172 121 54 chr13 66978985 66979860 -53304452 + ORR1A2-int LTR MaLR 3 873 -919 7 1096 777 89 18 0 chr13 66979862 66979974 -53304338 + ORR1A2-int LTR MaLR 1850 1963 0 7 1096 1811 92 105 96 chr13 66979974 66980230 -53304082 + ORR1A2 LTR MaLR 1 286 -41 7 1096 1205 48 0 0 chr13 66980230 66980377 -53303935 + B1_Mus2 SINE Alu 1 147 0 7 1096 1811 92 105 96 chr13 66980377 66980444 -53303868 + ORR1A2 LTR MaLR 287 327 0 7 1096 359 174 89 19 chr13 66980839 66980929 -53303383 + B1_Mur2 SINE Alu 1 106 -43 7 1096 342 0 0 0 chr13 66980939 66980977 -53303335 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 7 1096 645 141 38 83 chr13 66981398 66981530 -53302782 + RLTR15 LTR ERVK 1 126 -233 7 1096 219 139 0 0 chr13 66982037 66982073 -53302239 + (T)n Simple_repeat Simple_repeat 1 36 0 7 1096 1324 56 11 0 chr13 66982165 66982343 -53301969 - L1_Mus1 LINE L1 0 6567 6388 7 1096 21607 105 9 5 chr13 66982344 66986432 -53297880 + L1_Mus3 LINE L1 2531 6634 -4 7 1096 678 167 13 34 chr13 66986442 66986591 -53297721 + Lx7 LINE L1 5738 5883 -1813 7 1096 2106 165 70 40 chr13 66986591 66986998 -53297314 - RMER6A LTR ERVK 0 756 331 7 1096 192 40 0 0 chr13 66986998 66987023 -53297289 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 7 1096 414 0 0 0 chr13 66987030 66987076 -53297236 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 1096 2106 165 70 40 chr13 66987076 66987133 -53297179 - RMER6A LTR ERVK -426 330 270 7 1096 4135 247 97 16 chr13 66987139 66987814 -53296498 + Lx6 LINE L1 6120 6832 -628 7 1096 4343 143 42 3 chr13 66987814 66988523 -53295789 - RMER19A LTR ERVK 0 737 1 7 1096 4135 247 97 16 chr13 66988523 66989063 -53295249 + Lx6 LINE L1 6833 7433 -27 7 1096 294 277 32 48 chr13 66989084 66989270 -53295042 - RMER10B LTR ERVL -141 257 75 7 1096 232 289 162 63 chr13 66989722 66989944 -53294368 + L2c LINE L2 3028 3271 -116 7 1096 779 191 0 0 chr13 66990066 66990197 -53294115 + B1_Mur4 SINE Alu 1 131 -19 7 1096 245 201 64 13 chr13 66990242 66990398 -53293914 + (TA)n Simple_repeat Simple_repeat 2 165 0 7 1096 23 0 0 0 chr13 66990468 66990491 -53293821 + AT_rich Low_complexity Low_complexity 1 23 0 7 1096 408 252 92 0 chr13 66990492 66990611 -53293701 - B3 SINE B2 -4 212 83 7 1096 408 276 30 10 chr13 66994927 66995026 -53289286 - B3A SINE B2 -96 102 2 7 1096 384 240 29 29 chr13 66995267 66995370 -53288942 - PB1D10 SINE Alu 0 117 15 7 1096 2242 195 75 32 chr13 66995580 66995669 -53288643 - RLTR20B2 LTR ERVK -3 557 467 7 1096 441 0 0 0 chr13 66995669 66995718 -53288594 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1096 2242 195 75 32 chr13 66995718 66996162 -53288150 - RLTR20B2 LTR ERVK -94 466 2 7 1096 366 295 16 118 chr13 66996835 66996962 -53287350 - RSINE1 SINE B4 -6 159 46 7 1096 595 152 0 0 chr13 66997429 66997521 -53286791 + RMER6C LTR ERVK 1 92 -598 7 1096 1598 152 84 22 chr13 66997557 66997582 -53286730 + RMER6C LTR ERVK 348 381 -309 7 1096 1934 158 184 37 chr13 66997582 66998017 -53286295 - RLTR19 LTR ERVK 0 499 1 7 1096 1598 152 84 22 chr13 66998017 66998314 -53285998 + RMER6C LTR ERVK 382 690 0 7 1096 404 305 43 62 chr13 66999022 66999183 -53285129 + ID_B1 SINE B4 64 221 -3 8 1096 590 233 52 15 chr13 66999053 66999188 -53285124 + B1_Mur1 SINE Alu 10 149 0 8 1096 1093 90 107 12 chr13 66999330 66999499 -53284813 - B2_Mm2 SINE B2 -9 186 2 8 1096 721 143 9 0 chr13 67000000 67000105 -53284207 + B1_Mur4 SINE Alu 29 134 -16 1 1096 265 289 69 107 chr13 67000013 67000172 -53284140 + RLTR25B LTR ERVK 442 594 -434 2 1096 229 236 53 53 chr13 67000422 67000498 -53283814 - B1_Mus2 SINE Alu 0 147 72 3 1096 1638 230 51 15 chr13 67000581 67000970 -53283342 - Lx5 LINE L1 -81 6969 6567 4 1096 300 323 52 32 chr13 67002049 67002213 -53282099 + MIRc SINE MIR 23 187 -81 5 1096 282 272 59 83 chr13 67002564 67002728 -53281584 - PB1D9 SINE Alu 0 149 3 6 1096 435 38 0 0 chr13 67002741 67002794 -53281518 + (TG)n Simple_repeat Simple_repeat 2 54 0 7 1096 351 271 243 35 chr13 67002815 67003041 -53281271 - B4 SINE B4 -13 279 7 8 1096 407 319 96 0 chr13 67003250 67003385 -53280927 + RSINE1 SINE B4 4 151 -14 9 1096 35 24 0 0 chr13 67004143 67004185 -53280127 + AT_rich Low_complexity Low_complexity 1 42 0 1 1096 227 200 0 0 chr13 67004353 67004388 -53279924 + B1F SINE Alu 18 52 -97 1 1096 264 77 0 0 chr13 67004409 67004448 -53279864 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1096 289 262 33 0 chr13 67004458 67004519 -53279793 + ID4_ SINE ID 1 63 -20 1 1096 524 290 23 15 chr13 67004698 67004831 -53279481 - B4 SINE B4 -56 236 103 1 1096 371 234 0 38 chr13 67004905 67004985 -53279327 - B4 SINE B4 -215 77 1 1 1096 787 242 98 21 chr13 67005158 67005352 -53278960 + ID_B1 SINE B4 16 224 0 1 1096 568 318 126 16 chr13 67006634 67006880 -53277432 - MER2 DNA MER2_type -64 281 9 1 1096 259 283 84 9 chr13 67006886 67006993 -53277319 - MIR SINE MIR -62 200 86 1 1096 375 252 97 8 chr13 67007224 67007348 -53276964 + B1F1 SINE Alu 13 147 -2 1 1096 1235 68 0 20 chr13 67007643 67007794 -53276518 + B1_Mus1 SINE Alu 1 148 0 1 1096 214 136 22 22 chr13 67007796 67007841 -53276471 + A-rich Low_complexity Low_complexity 3 47 0 2 1096 671 96 19 0 chr13 67008264 67008368 -53275944 + (CATA)n Simple_repeat Simple_repeat 2 107 0 2 1096 736 227 86 54 chr13 67008459 67008645 -53275667 + B3A SINE B2 1 192 -6 2 1096 23 0 0 0 chr13 67009525 67009548 -53274764 + AT_rich Low_complexity Low_complexity 1 23 0 2 1096 300 263 82 31 chr13 67010258 67010356 -53273956 + MLT1I LTR MaLR 299 401 -10 2 1096 938 290 50 7 chr13 67010408 67010686 -53273626 - B4A SINE B4 -2 290 1 2 1096 250 355 30 68 chr13 67011362 67011495 -53272817 - MIRc SINE MIR -119 149 22 2 1096 701 194 288 0 chr13 67011906 67012066 -53272246 + B3 SINE B2 3 208 -8 2 1096 434 269 57 19 chr13 67012118 67012362 -53271950 + Lx9 LINE L1 7061 7347 -297 2 1096 1565 167 86 31 chr13 67012378 67012735 -53271577 + ORR1C2 LTR MaLR 12 384 0 2 1096 390 243 107 66 chr13 67012735 67012977 -53271335 + Lx9 LINE L1 7388 7639 -5 2 1096 26 74 0 0 chr13 67013052 67013106 -53271206 + AT_rich Low_complexity Low_complexity 1 54 0 3 1096 464 280 62 23 chr13 67013448 67013576 -53270736 + B1F1 SINE Alu 1 133 -16 3 1096 242 347 65 16 chr13 67013724 67013847 -53270465 + MER5A DNA MER1_type 58 186 -3 3 1096 242 29 29 0 chr13 67015954 67015989 -53268323 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 3 1096 1279 41 7 0 chr13 67016919 67017064 -53267248 + B1_Mus2 SINE Alu 2 147 0 3 1096 411 171 0 0 chr13 67018280 67018356 -53265956 + (TA)n Simple_repeat Simple_repeat 1 76 0 3 1096 24 0 0 0 chr13 67018553 67018577 -53265735 + AT_rich Low_complexity Low_complexity 1 24 0 3 1096 673 294 107 23 chr13 67018598 67018862 -53265450 - B4 SINE B4 -11 281 5 3 1096 393 288 0 46 chr13 67018875 67018984 -53265328 - PB1D10 SINE Alu -8 109 6 3 1096 6204 123 56 2 chr13 67019198 67020107 -53264205 + RMER17B LTR ERVK 1 958 0 3 1096 376 280 9 61 chr13 67020217 67020331 -53263981 + MIR SINE MIR 15 122 -140 4 1096 1338 165 9 26 chr13 67020724 67020954 -53263358 + URR1A DNA MER1_type 1 226 0 4 1096 2109 232 25 25 chr13 67021351 67021854 -53262458 + MT2A LTR ERVL 9 596 -5 4 1096 219 69 0 0 chr13 67021899 67021928 -53262384 + (TTA)n Simple_repeat Simple_repeat 1 29 0 4 1096 576 257 0 0 chr13 67021980 67022085 -53262227 + PB1D10 SINE Alu 5 109 -8 4 1096 2132 92 42 22 chr13 67022345 67022378 -53261934 - ORR1A2 LTR MaLR -9 318 292 4 1096 7822 45 39 5 chr13 67022378 67023305 -53261007 + RLTR13A2 LTR ERVK 1 958 0 4 1096 2132 92 42 22 chr13 67023305 67023583 -53260729 - ORR1A2 LTR MaLR -36 291 1 4 1096 300 197 45 15 chr13 67024138 67024205 -53260107 + B1F1 SINE Alu 33 101 -48 4 1096 357 289 26 0 chr13 67024266 67024342 -53259970 + ID4_ SINE ID 3 80 -3 4 1096 2782 162 76 28 chr13 67024638 67025178 -53259134 - RLTR20A2 LTR ERVK -12 566 1 4 1096 1060 114 123 35 chr13 67025178 67025405 -53258907 - MYSERV16_I-int LTR ERVK 0 2326 2080 4 1096 287 299 167 40 chr13 67025983 67026157 -53258155 - LTR33A_ LTR ERVL -291 240 45 5 1096 625 234 229 7 chr13 67026602 67026873 -53257439 - L1MA9 LINE L1 -244 6068 5738 5 1096 240 292 79 71 chr13 67026914 67026941 -53257371 - B4A SINE B4 -46 246 168 5 1096 246 300 43 43 chr13 67026941 67027035 -53257277 - MT2B LTR ERVL -310 291 198 5 1096 502 228 10 0 chr13 67026955 67027068 -53257244 - B1_Mur1 SINE Alu -29 120 7 5 1096 240 292 79 71 chr13 67027035 67027054 -53257258 - B4A SINE B4 -46 167 106 5 1096 694 246 47 142 chr13 67027448 67027680 -53256632 + B4 SINE B4 1 210 -82 5 1096 459 0 0 0 chr13 67027738 67027789 -53256523 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1096 240 100 0 0 chr13 67028144 67028184 -53256128 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1096 1831 151 114 27 chr13 67028244 67028577 -53255735 + ORR1B2 LTR MaLR 3 364 -3 5 1096 249 83 0 0 chr13 67028800 67028836 -53255476 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1096 673 256 99 11 chr13 67029333 67029515 -53254797 + B3A SINE B2 1 198 0 6 1096 308 250 59 59 chr13 67029631 67029733 -53254579 + PB1D7 SINE Alu 1 102 -18 6 1096 322 246 15 0 chr13 67029856 67029921 -53254391 - PB1D7 SINE Alu -49 71 6 6 1096 267 367 0 0 chr13 67029921 67029935 -53254377 - B4A SINE B4 -137 155 77 6 1096 1517 73 5 20 chr13 67031500 67031695 -53252617 + B2_Mm1t SINE B2 2 193 0 6 1096 1344 34 0 0 chr13 67031705 67031852 -53252460 + B1_Mm SINE Alu 1 147 0 6 1096 299 203 43 14 chr13 67032356 67032426 -53251886 + B1F SINE Alu 1 72 -77 6 1096 247 298 121 38 chr13 67035715 67035872 -53248440 + MIR SINE MIR 76 245 -17 6 1096 344 300 64 0 chr13 67035880 67035990 -53248322 - PB1D10 SINE Alu 0 117 1 6 1096 269 266 24 48 chr13 67036483 67036566 -53247746 + MIR SINE MIR 101 181 -81 6 1096 30 0 0 0 chr13 67036818 67036848 -53247464 + AT_rich Low_complexity Low_complexity 1 30 0 7 1096 29 0 0 0 chr13 67036957 67036986 -53247326 + AT_rich Low_complexity Low_complexity 1 29 0 7 1096 1072 69 0 116 chr13 67036986 67037150 -53247162 - B1_Mus2 SINE Alu -1 146 2 7 1096 295 123 70 0 chr13 67038110 67038167 -53246145 + B1F1 SINE Alu 89 149 0 7 1096 1487 98 262 55 chr13 67039454 67039725 -53244587 + ORR1A2 LTR MaLR 1 327 0 7 1096 4217 162 122 17 chr13 67039728 67040658 -53243654 + ORR1A2-int LTR MaLR 4 1030 -933 7 1096 505 110 0 0 chr13 67040653 67040726 -53243586 + ORR1A2 LTR MaLR 254 326 0 7 1096 220 254 0 0 chr13 67040737 67040819 -53243493 + (TCTCTG)n Simple_repeat Simple_repeat 1 82 0 7 1096 22 0 0 0 chr13 67041965 67041987 -53242325 + AT_rich Low_complexity Low_complexity 1 22 0 7 1096 385 304 28 28 chr13 67042033 67042175 -53242137 - RSINE1 SINE B4 -13 152 11 7 1096 294 344 93 19 chr13 67042475 67042733 -53241579 - L1MC LINE L1 -2039 5843 5567 7 1096 284 309 67 107 chr13 67043419 67043528 -53240784 + MIRb SINE MIR 37 136 -132 7 1096 1683 16 27 0 chr13 67043528 67043713 -53240599 - B2_Mm1t SINE B2 -3 190 1 8 1096 284 309 67 107 chr13 67043713 67043828 -53240484 + MIRb SINE MIR 137 252 -16 7 1096 300 278 78 49 chr13 67044377 67044479 -53239833 - RSINE1 SINE B4 0 165 61 8 1096 793 162 62 56 chr13 67044551 67044695 -53239617 - B1_Mus1 SINE Alu 0 148 4 8 1096 21 0 0 0 chr13 67045223 67045244 -53239068 + AT_rich Low_complexity Low_complexity 1 21 0 8 1096 206 281 18 0 chr13 67045563 67045620 -53238692 + GA-rich Low_complexity Low_complexity 1 58 0 8 1096 1120 91 0 0 chr13 67046577 67046720 -53237592 - B1_Mus1 SINE Alu -5 143 1 8 1096 272 250 25 12 chr13 67046736 67046817 -53237495 - MLT1A1 LTR MaLR -19 389 308 8 1096 1348 95 28 0 chr13 67046927 67047106 -53237206 - B2_Mm1t SINE B2 -9 184 1 8 1096 201 108 0 0 chr13 67047322 67047359 -53236953 + (T)n Simple_repeat Simple_repeat 1 37 0 8 1096 1253 47 0 0 chr13 67047360 67047508 -53236804 - B1_Mus1 SINE Alu 0 148 1 8 1096 386 287 41 8 chr13 67047551 67047674 -53236638 - B1F SINE Alu -3 146 20 9 1096 207 0 0 0 chr13 67047761 67047784 -53236528 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 9 1096 1518 79 0 16 chr13 67048076 67048269 -53236043 - B2_Mm2 SINE B2 -4 191 2 9 1096 216 0 0 0 chr13 67048720 67048744 -53235568 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1096 679 291 143 31 chr13 67048755 67049014 -53235298 - B4A SINE B4 -3 289 2 9 1096 183 80 0 0 chr13 67049511 67049536 -53234776 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 9 1096 270 242 0 31 chr13 67049900 67049964 -53234348 - MIR3 SINE MIR -30 178 117 9 1096 483 148 0 0 chr13 67051481 67051569 -53232743 + (TG)n Simple_repeat Simple_repeat 1 88 0 9 1096 429 305 82 79 chr13 67051658 67051847 -53232465 - B4A SINE B4 -85 207 15 9 1096 303 311 0 62 chr13 67051859 67051873 -53232439 - PB1D10 SINE Alu -7 110 102 9 1096 1734 146 274 3 chr13 67051873 67052183 -53232129 - ORR1B1 LTR MaLR 0 394 1 1 1096 303 311 0 62 chr13 67052183 67052264 -53232048 - PB1D10 SINE Alu -16 101 21 9 1096 3114 35 0 14 chr13 67052342 67052693 -53231619 - ORR1A1 LTR MaLR 0 346 1 1 1096 562 289 74 52 chr13 67052930 67053194 -53231118 - RLTR15 LTR ERVK -37 322 49 1 1096 1485 89 5 10 chr13 67053194 67053387 -53230925 - B2_Mm1a SINE B2 0 193 2 1 1096 402 272 88 106 chr13 67053387 67053527 -53230785 - RLTR15 LTR ERVK -339 189 48 1 1096 971 104 74 0 chr13 67053527 67053662 -53230650 - B1_Mm SINE Alu 0 147 3 1 1096 402 272 88 106 chr13 67053662 67053705 -53230607 - RLTR15 LTR ERVK -481 47 1 1 1096 1191 83 0 0 chr13 67054970 67055114 -53229198 - B1_Mus1 SINE Alu 0 148 5 1 1096 402 224 181 16 chr13 67055364 67055491 -53228821 - B1_Mur3 SINE Alu 0 149 2 1 1096 304 146 21 0 chr13 67056055 67056103 -53228209 + B4A SINE B4 29 77 -215 1 1096 189 132 0 0 chr13 67057274 67057312 -53227000 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1096 278 333 193 16 chr13 67058189 67058433 -53225879 - MER21B LTR ERV1 -169 694 408 1 1096 225 0 0 0 chr13 67059158 67059183 -53225129 + (CTG)n Simple_repeat Simple_repeat 2 26 0 1 1096 720 211 49 0 chr13 67059222 67059364 -53224948 + B1_Mur2 SINE Alu 1 149 0 1 1096 401 241 0 11 chr13 67060514 67060602 -53223710 + PB1D10 SINE Alu 24 110 -7 1 1096 1342 82 33 0 chr13 67060882 67061066 -53223246 - B2_Mm2 SINE B2 -5 190 1 1 1096 397 265 29 0 chr13 67061076 67061178 -53223134 - ID_B1 SINE B4 -5 219 115 1 1096 414 0 0 0 chr13 67061896 67061942 -53222370 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1096 1009 232 214 12 chr13 67062097 67062433 -53221879 - MTD LTR MaLR -14 405 2 1 1096 838 252 122 0 chr13 67062500 67062762 -53221550 + MER2 DNA MER2_type 30 323 -22 1 1096 1254 48 0 0 chr13 67063377 67063523 -53220789 - B1_Mus2 SINE Alu -1 146 1 1 1096 246 62 0 0 chr13 67063628 67063660 -53220652 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1096 759 310 44 27 chr13 67064834 67065172 -53219140 - MLT1C LTR MaLR -73 394 51 1 1096 243 88 0 0 chr13 67065772 67065806 -53218506 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1096 213 65 0 0 chr13 67065825 67065856 -53218456 + (TTG)n Simple_repeat Simple_repeat 3 33 0 1 1096 518 212 9 17 chr13 67067671 67067786 -53216526 + B1F SINE Alu 28 141 -8 1 1096 241 293 0 51 chr13 67067995 67068074 -53216238 - L2 LINE L2 -353 3066 2992 1 1096 1163 105 10 3 chr13 67068168 67069358 -53214954 + (TCC)n Simple_repeat Simple_repeat 1 1197 0 1 1096 1666 157 77 18 chr13 67069818 67070156 -53214156 - ORR1B2 LTR MaLR -8 359 2 1 1096 257 218 0 0 chr13 67070569 67070624 -53213688 - L1M5 LINE L1 -259 5865 5811 1 1096 329 315 26 44 chr13 67071862 67071975 -53212337 - PB1D10 SINE Alu -2 115 5 1 1096 196 323 80 10 chr13 67072166 67072266 -53212046 - MIRb SINE MIR -82 186 80 1 1096 23 0 0 0 chr13 67073882 67073905 -53210407 + AT_rich Low_complexity Low_complexity 1 23 0 1 1096 202 200 0 0 chr13 67074269 67074304 -53210008 + C-rich Low_complexity Low_complexity 1 35 0 1 1096 391 315 38 8 chr13 67074685 67074816 -53209496 + B1F1 SINE Alu 1 135 -14 1 1096 237 294 0 0 chr13 67075856 67075907 -53208405 + RSINE1 SINE B4 4 54 -111 1 1096 739 253 0 13 chr13 67076401 67076553 -53207759 - RSINE1 SINE B4 -12 153 4 1 1096 33 0 0 0 chr13 67078039 67078072 -53206240 + AT_rich Low_complexity Low_complexity 1 33 0 1 1096 292 368 26 36 chr13 67078850 67079042 -53205270 - B4A SINE B4 0 292 103 1 1096 1234 34 7 0 chr13 67081833 67081979 -53202333 + B1_Mus1 SINE Alu 2 148 0 1 1096 198 71 0 0 chr13 67081986 67082014 -53202298 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1096 926 281 50 22 chr13 67082221 67082578 -53201734 - RLTR18-int LTR ERVK -112 5249 4883 1 1096 2601 57 6 15 chr13 67083568 67083906 -53200406 - L1_Mus3 LINE L1 -6 6632 6298 1 1096 392 218 29 38 chr13 67084373 67084478 -53199834 - MMERGLN-int LTR ERV1 -2487 5291 5188 1 1096 332 339 43 30 chr13 67084513 67084814 -53199498 - RLTR14-int LTR ERV1 -1997 3320 3016 1 1096 239 141 0 40 chr13 67085200 67085274 -53199038 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 1 1096 968 86 65 0 chr13 67085276 67085415 -53198897 - B1_Mus1 SINE Alu 0 148 1 1 1096 408 322 39 43 chr13 67085419 67085675 -53198637 - MMERGLN-int LTR ERV1 -3217 4339 4057 1 1096 294 246 0 0 chr13 67085740 67085797 -53198515 + B3 SINE B2 12 68 -148 1 1096 1931 181 32 45 chr13 67085818 67086195 -53198117 - Lx5 LINE L1 -4 7046 6675 1 1096 494 225 246 0 chr13 67086195 67086333 -53197979 + B3 SINE B2 45 216 0 1 1096 345 256 0 62 chr13 67086760 67086856 -53197456 - MER57A-int LTR ERV1 -294 5893 5804 1 1096 294 73 0 0 chr13 67086902 67086943 -53197369 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1096 694 259 126 51 chr13 67086993 67087327 -53196985 - ORR1E LTR MaLR 0 359 1 1 1096 421 271 9 0 chr13 67089340 67089447 -53194865 - Lx8 LINE L1 -325 7148 7041 1 1096 200 135 0 26 chr13 67089808 67089846 -53194466 + (TTAA)n Simple_repeat Simple_repeat 3 39 0 1 1096 195 42 0 0 chr13 67090209 67090233 -53194079 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1096 1483 63 5 10 chr13 67090379 67090572 -53193740 + B2_Mm1a SINE B2 2 193 0 1 1096 298 258 75 11 chr13 67091320 67091414 -53192898 - MTEb LTR MaLR -5 374 275 1 1096 225 0 0 0 chr13 67091514 67091539 -53192773 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1096 209 320 80 20 chr13 67093496 67093646 -53190666 + MIR3 SINE MIR 40 198 -10 1 1096 244 313 49 63 chr13 67093989 67094132 -53190180 - MER2 DNA MER2_type -9 336 196 1 1096 495 0 0 0 chr13 67095009 67095064 -53189248 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1096 24 32 0 0 chr13 67095222 67095253 -53189059 + AT_rich Low_complexity Low_complexity 1 31 0 1 1096 1554 159 45 21 chr13 67095380 67095668 -53188644 + Lx4A LINE L1 6762 7056 -2 1 1096 291 140 0 0 chr13 67095801 67095851 -53188461 + (T)n Simple_repeat Simple_repeat 1 50 0 1 1096 301 262 87 0 chr13 67095871 67095974 -53188338 - B4 SINE B4 -179 113 2 1 1096 243 88 0 0 chr13 67096191 67096225 -53188087 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1 1096 531 0 0 0 chr13 67097139 67097198 -53187114 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 1096 477 110 0 0 chr13 67099346 67099419 -53184893 + (TCCC)n Simple_repeat Simple_repeat 4 76 0 1 1096 266 270 16 0 chr13 67099670 67099733 -53184579 - ID4_ SINE ID -3 80 17 1 1096 1203 36 0 0 chr13 67099785 67099924 -53184388 - B1_Mm SINE Alu -7 140 2 1 1096 240 35 0 0 chr13 67101249 67101278 -53183034 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1096 349 177 12 37 chr13 67101936 67102018 -53182294 - PB1D10 SINE Alu -17 100 21 1 1096 23 0 0 0 chr13 67103745 67103768 -53180544 + AT_rich Low_complexity Low_complexity 1 23 0 1 1096 3239 42 0 0 chr13 67104511 67104897 -53179415 + L1Md_F2 LINE L1 6197 6582 0 1 1096 403 242 141 0 chr13 67105149 67105248 -53179064 + PB1D9 SINE Alu 1 113 -7 1 1096 293 341 16 24 chr13 67105521 67105647 -53178665 - Arthur1B DNA Tip100 -1099 126 2 1 1096 188 79 0 50 chr13 67106735 67106775 -53177537 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 1 1096 1383 234 89 9 chr13 67107516 67107865 -53176447 - MTEa LTR MaLR 0 379 3 1 1096 426 290 6 90 chr13 67107950 67108128 -53176184 + RSINE1 SINE B4 3 165 0 1 1097 571 192 92 0 chr13 67108986 67109106 -53175206 + ID_B1 SINE B4 94 224 0 1 1097 605 259 228 0 chr13 67109319 67109543 -53174769 + MTE2b LTR MaLR 1 275 -104 1 1097 269 75 0 24 chr13 67109570 67109611 -53174701 + B4 SINE B4 188 227 -65 1 1097 1437 241 59 11 chr13 67109703 67110059 -53174253 - ORR1D1 LTR MaLR -1 373 1 1 1097 1373 269 111 39 chr13 67110080 67110922 -53173390 - L1MB1 LINE L1 -119 6172 5256 1 1097 180 0 0 0 chr13 67110928 67110948 -53173364 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1 1097 1154 82 0 7 chr13 67110948 67111096 -53173216 - B1_Mus2 SINE Alu 0 147 1 1 1097 24 0 0 0 chr13 67111633 67111657 -53172655 + AT_rich Low_complexity Low_complexity 1 24 0 1 1097 684 154 36 14 chr13 67111658 67111796 -53172516 - Lx3B LINE L1 -3 6970 6830 1 1097 738 226 33 47 chr13 67111935 67112149 -53172163 + MER121 Unknown Unknown 82 292 -120 1 1097 475 295 152 35 chr13 67113598 67114119 -53170193 + MER20B DNA MER1_type 202 783 0 1 1097 744 268 43 12 chr13 67114201 67114454 -53169858 + L1MB2 LINE L1 5791 6051 -120 1 1097 586 279 147 13 chr13 67114541 67114773 -53169539 - MER33 DNA MER1_type -58 266 4 1 1097 212 304 214 32 chr13 67114796 67114983 -53169329 - MIR SINE MIR -11 251 31 1 1097 426 39 0 0 chr13 67115184 67115236 -53169076 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1097 35341 26 3 7 chr13 67115455 67120678 -53163634 + L1Md_T LINE L1 412 5586 -297 1 1097 8455 34 0 0 chr13 67120678 67121673 -53162639 + L1Md_T LINE L1 5587 6581 -1 1 1097 636 249 379 24 chr13 67122594 67122897 -53161415 + MTD LTR MaLR 7 398 -21 1 1097 558 231 6 159 chr13 67122889 67123059 -53161253 + ID_B1 SINE B4 81 224 0 1 1097 192 25 100 0 chr13 67123348 67123388 -53160924 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 1 1097 1201 55 0 0 chr13 67123389 67123535 -53160777 - B1_Mus1 SINE Alu -2 146 1 1 1097 2334 89 36 0 chr13 67123776 67124112 -53160200 - MTB LTR MaLR -52 348 1 1 1097 6485 75 9 1 chr13 67124118 67125018 -53159294 + L1_Mus1 LINE L1 5661 6567 0 1 1097 3027 74 0 0 chr13 67125105 67125497 -53158815 - MTB LTR MaLR 0 400 9 1 1097 641 311 83 31 chr13 67125986 67126167 -53158145 + Lx8 LINE L1 6728 6911 -562 2 1097 2197 120 101 10 chr13 67126167 67126554 -53157758 - BGLII_Mus LTR ERVK 0 422 1 2 1097 641 311 83 31 chr13 67126554 67126697 -53157615 + Lx8 LINE L1 6912 7069 -404 2 1097 359 274 37 9 chr13 67126747 67126854 -53157458 + PB1D9 SINE Alu 5 114 -6 2 1097 598 171 18 31 chr13 67126862 67127025 -53157287 + A-rich Low_complexity Low_complexity 4 164 0 2 1097 4240 76 17 32 chr13 67127050 67127646 -53156666 - LTRIS_Mus LTR ERV1 0 587 1 2 1097 302 262 49 28 chr13 67128270 67128456 -53155856 + L1_Rod LINE L1 1243 1421 -4459 2 1097 416 163 88 98 chr13 67128481 67128685 -53155627 + RMER17C LTR ERVK 71 272 -138 2 1097 744 71 0 0 chr13 67128686 67128785 -53155527 + (GAAA)n Simple_repeat Simple_repeat 1 99 0 2 1097 250 177 0 13 chr13 67128839 67128893 -53155419 - RLTR31A_Mm LTR ERVK -2 582 542 2 1097 2025 147 0 3 chr13 67128925 67129245 -53155067 - RLTR31A_Mm LTR ERVK -265 319 1 2 1097 809 290 110 29 chr13 67129254 67130307 -53154005 + L1_Rod LINE L1 1538 2687 -3456 2 1097 532 288 86 0 chr13 67130329 67130468 -53153844 - MTE2b LTR MaLR -2 377 227 2 1097 1292 263 88 21 chr13 67130535 67131000 -53153312 + RMER15 LTR ERVL 27 575 0 2 1097 588 312 29 126 chr13 67131000 67131243 -53153069 - MTE2b LTR MaLR -160 219 1 2 1097 947 298 50 41 chr13 67131245 67131885 -53152427 + L1_Mur3 LINE L1 2681 3326 -2554 2 1097 549 340 117 19 chr13 67131892 67132201 -53152111 - MTEa LTR MaLR 0 379 41 2 1097 315 287 53 11 chr13 67132180 67132275 -53152037 - MTE2b LTR MaLR -280 99 1 2 1097 419 313 53 15 chr13 67132371 67132504 -53151808 - MTE2b LTR MaLR -241 138 1 2 1097 246 311 0 19 chr13 67133498 67133603 -53150709 + Lx7 LINE L1 6090 6192 -1504 2 1097 870 309 0 0 chr13 67133649 67133898 -53150414 + Lx8 LINE L1 6395 6643 -830 2 1097 545 318 99 0 chr13 67134028 67134179 -53150133 + B3A SINE B2 2 167 -31 2 1097 615 14 0 0 chr13 67134184 67134256 -53150056 + (CA)n Simple_repeat Simple_repeat 2 73 0 2 1097 236 200 0 83 chr13 67134401 67134461 -53149851 + PB1 SINE Alu 19 73 -54 2 1097 459 0 0 0 chr13 67134839 67134890 -53149422 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1097 343 333 81 37 chr13 67135678 67135924 -53148388 + L1M3 LINE L1 3707 3963 -2180 2 1097 668 89 44 9 chr13 67136111 67136222 -53148090 + RLTR9A LTR ERVK 271 413 -2 2 1097 573 301 82 5 chr13 67136492 67136676 -53147636 + B3A SINE B2 1 198 0 2 1097 707 301 30 7 chr13 67136688 67136986 -53147326 + L1M3 LINE L1 4305 4609 -1531 2 1097 4153 45 4 6 chr13 67137410 67137927 -53146385 + L1Md_F2 LINE L1 6067 6582 0 2 1097 2253 214 48 85 chr13 67138025 67138719 -53145593 - MTC-int LTR MaLR -118 1140 473 2 1097 1245 41 0 0 chr13 67138984 67139131 -53145181 - B1_Mus2 SINE Alu 0 147 1 2 1097 21 57 0 0 chr13 67139524 67139559 -53144753 + AT_rich Low_complexity Low_complexity 1 35 0 2 1097 250 192 91 0 chr13 67139625 67139724 -53144588 + (TATAA)n Simple_repeat Simple_repeat 3 110 0 2 1097 472 229 35 36 chr13 67141289 67142098 -53142214 - MMSAT4 Satellite Satellite -2 808 1 2 1097 239 331 28 35 chr13 67142030 67142174 -53142138 - MurSatRep1 Unknown Unknown -248 1889 1747 2 1097 430 246 40 35 chr13 67142131 67143172 -53141140 - MMSAT4 Satellite Satellite -3 1045 1 2 1097 371 250 0 14 chr13 67143467 67143540 -53140772 + RSINE1 SINE B4 62 133 -32 2 1097 465 19 0 0 chr13 67143553 67143607 -53140705 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1097 1063 118 35 0 chr13 67144237 67144407 -53139905 + B2_Mm2 SINE B2 2 177 -18 2 1097 1800 161 17 65 chr13 67144868 67145172 -53139140 + RLTR11A LTR ERVK 59 332 -196 2 1097 1612 37 0 0 chr13 67145172 67145360 -53138952 + B2_Mm1t SINE B2 2 189 -4 2 1097 1800 153 20 51 chr13 67145360 67145566 -53138746 + RLTR11A LTR ERVK 333 528 0 2 1097 227 264 27 60 chr13 67146195 67146344 -53137968 - L1_Mur1 LINE L1 -2297 3589 3446 2 1097 315 96 0 0 chr13 67146426 67146478 -53137834 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 2 1097 435 256 132 5 chr13 67146478 67146690 -53137622 + Lx8 LINE L1 3639 3877 -2003 2 1097 331 324 101 7 chr13 67146692 67146841 -53137471 + L1M2 LINE L1 4201 4363 -1780 2 1097 1210 288 71 46 chr13 67146872 67147851 -53136461 + Lx8 LINE L1 4922 5976 -1668 2 1097 275 274 90 104 chr13 67147925 67148266 -53136046 + RLTR20D LTR ERVK 60 390 -302 2 1097 13860 160 156 19 chr13 67148278 67149367 -53134945 + Lx5 LINE L1 2112 3224 -2653 2 1097 567 0 0 0 chr13 67149367 67149430 -53134882 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 1097 13860 158 148 17 chr13 67149430 67151674 -53132638 + Lx5 LINE L1 3225 5917 -1133 2 1097 3998 229 79 24 chr13 67152087 67152694 -53131618 + Lx5 LINE L1 5959 6631 -419 2 1097 558 0 0 0 chr13 67152694 67152756 -53131556 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1097 3998 229 79 24 chr13 67152756 67153182 -53131130 + Lx5 LINE L1 6632 7049 -1 2 1097 266 240 20 20 chr13 67153233 67153331 -53130981 - MurSatRep1 Unknown Unknown -1409 728 631 2 1097 31 26 0 0 chr13 67153882 67153920 -53130392 + AT_rich Low_complexity Low_complexity 1 38 0 2 1097 1109 171 1 8 chr13 67156885 67156964 -53127348 + ORR1D1 LTR MaLR 156 182 -192 2 1097 387 0 0 0 chr13 67156964 67157007 -53127305 + (TCTG)n Simple_repeat Simple_repeat 1 43 0 2 1097 1109 184 4 35 chr13 67157007 67157200 -53127112 + ORR1D1 LTR MaLR 183 374 0 2 1097 776 295 67 46 chr13 67157740 67158326 -53125986 - L1_Mur3 LINE L1 -120 5760 5163 2 1097 742 246 52 74 chr13 67158375 67158740 -53125572 - L1M2 LINE L1 -1185 4958 4602 2 1097 26 0 0 0 chr13 67160869 67160895 -53123417 + AT_rich Low_complexity Low_complexity 1 26 0 2 1097 338 266 11 0 chr13 67161112 67161206 -53123106 + ID_B1 SINE B4 122 216 -8 2 1097 666 271 49 93 chr13 67161250 67161383 -53122929 + Lx8 LINE L1 7090 7231 -242 2 1097 222 37 0 0 chr13 67161383 67161410 -53122902 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1097 666 271 49 93 chr13 67161410 67161662 -53122650 + Lx8 LINE L1 7232 7457 -16 2 1097 1141 68 7 0 chr13 67162461 67162607 -53121705 - B1_Mus1 SINE Alu -1 147 1 2 1097 1234 102 32 16 chr13 67162624 67162814 -53121498 - B2_Mm1t SINE B2 0 193 1 2 1097 304 312 10 0 chr13 67162831 67162927 -53121385 + L1M LINE L1 5299 5395 -729 2 1097 343 390 27 0 chr13 67162960 67163106 -53121206 + ID_B1 SINE B4 73 222 -2 2 1097 551 287 0 43 chr13 67163165 67163329 -53120983 - RLTR16 LTR ERVK 0 505 349 2 1097 4121 141 84 94 chr13 67163355 67164270 -53120042 + RMER17A2 LTR ERVK 1 906 0 2 1097 23 33 0 0 chr13 67164282 67164312 -53120000 + AT_rich Low_complexity Low_complexity 1 30 0 2 1097 242 257 29 0 chr13 67164503 67164573 -53119739 + L1MA6 LINE L1 6141 6212 -88 2 1097 23 33 0 0 chr13 67165261 67165291 -53119021 + AT_rich Low_complexity Low_complexity 1 30 0 2 1097 180 0 0 0 chr13 67165326 67165346 -53118966 + (ATTG)n Simple_repeat Simple_repeat 2 21 0 2 1097 1142 108 0 0 chr13 67165347 67165505 -53118807 - B2_Mm2 SINE B2 -37 158 1 2 1097 739 288 51 60 chr13 67165855 67166271 -53118041 + BGLII_B LTR ERVK 5 414 -27 2 1097 1275 34 0 0 chr13 67166997 67167144 -53117168 + B1_Mus2 SINE Alu 1 147 0 2 1097 464 191 82 30 chr13 67167435 67167570 -53116742 + MYSERV6-int LTR ERVK 4843 4984 -3975 2 1097 274 312 38 0 chr13 67167572 67167652 -53116660 + B1F2 SINE Alu 29 111 -38 2 1097 953 138 152 49 chr13 67167759 67168002 -53116310 + MYSERV6-int LTR ERVK 6407 6674 -2285 2 1097 604 262 115 22 chr13 67167984 67168253 -53116059 + MYSERV16_I-int LTR ERVK 28 321 -2005 2 1097 240 152 0 0 chr13 67168255 67168288 -53116024 - Lx4A LINE L1 -146 6912 6880 2 1097 995 153 41 41 chr13 67168286 67168483 -53115829 + Lx4A LINE L1 6862 7058 0 2 1097 428 296 36 107 chr13 67168529 67168885 -53115427 + MYSERV16_I-int LTR ERVK 320 650 -1676 2 1097 630 212 0 33 chr13 67168900 67169022 -53115290 + MYSERV-int LTR ERVK 4915 5032 -1518 2 1097 491 180 7 123 chr13 67169065 67169211 -53115101 + MYSERV-int LTR ERVK 6418 6546 -4 2 1097 976 278 61 44 chr13 67169214 67169621 -53114691 + BGLII_B LTR ERVK 1 414 -27 2 1097 1298 263 78 12 chr13 67169866 67170240 -53114072 - MTD LTR MaLR -14 405 2 2 1097 558 249 32 32 chr13 67171110 67171643 -53112669 - MMSAT4 Satellite Satellite -25 533 1 2 1097 474 380 16 16 chr13 67171584 67171897 -53112415 - MurSatRep1 Unknown Unknown -88 2049 1737 2 1097 507 236 48 48 chr13 67171841 67172468 -53111844 - MMSAT4 Satellite Satellite 0 627 1 2 1097 201 74 0 0 chr13 67173525 67173552 -53110760 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2 1097 304 317 48 0 chr13 67173602 67173706 -53110606 + RSINE1 SINE B4 57 165 0 2 1097 2599 180 57 45 chr13 67173850 67174427 -53109885 + RLTR31A_Mm LTR ERVK 1 584 0 2 1097 572 304 95 8 chr13 67174483 67174735 -53109577 + B4A SINE B4 1 274 -18 2 1097 936 182 0 7 chr13 67175506 67175655 -53108657 + B1_Mus1 SINE Alu 1 148 0 2 1097 255 271 20 20 chr13 67175779 67175877 -53108435 - MurSatRep1 Unknown Unknown -1409 728 631 2 1097 22 56 0 0 chr13 67175898 67175934 -53108378 + AT_rich Low_complexity Low_complexity 1 36 0 2 1097 361 355 59 18 chr13 67176650 67176988 -53107324 - L1MA6 LINE L1 -62 6238 5887 2 1097 1131 203 0 6 chr13 67177064 67177247 -53107065 + RLTR21 LTR ERVK 1 182 -1390 2 1097 1043 258 13 4 chr13 67177247 67177473 -53106839 - RLTR33 LTR ERVK 0 678 451 2 1097 556 224 183 18 chr13 67177476 67177640 -53106672 - MTC-int LTR MaLR -813 445 255 2 1097 851 196 44 6 chr13 67177642 67177822 -53106490 - ORR1D1 LTR MaLR -185 189 3 2 1097 262 209 59 15 chr13 67178105 67178173 -53106139 + ID4 SINE ID 2 72 -11 2 1097 518 262 16 0 chr13 67178564 67178686 -53105626 + B1_Mur1 SINE Alu 25 148 -1 2 1097 861 58 190 0 chr13 67178775 67178887 -53105425 + B1_Mus1 SINE Alu 2 136 -12 2 1097 207 0 0 0 chr13 67178887 67178910 -53105402 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 2 1097 1301 195 83 4 chr13 67179184 67179462 -53104850 + MTD LTR MaLR 112 411 -8 2 1097 2276 256 49 45 chr13 67179467 67180118 -53104194 + MTD-int LTR MaLR 2 655 -603 2 1097 237 303 26 0 chr13 67180118 67180194 -53104118 + L1_Mur3 LINE L1 3722 3799 -2081 2 1097 2963 194 67 38 chr13 67180197 67180224 -53104088 + L1_Rod LINE L1 4795 4824 -1023 2 1097 369 0 0 0 chr13 67180224 67180265 -53104047 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1097 2963 194 67 38 chr13 67180265 67181030 -53103282 + L1_Rod LINE L1 4825 5609 -238 2 1097 228 67 0 0 chr13 67181125 67181155 -53103157 + (TAGA)n Simple_repeat Simple_repeat 1 30 0 2 1097 472 271 37 8 chr13 67182793 67182897 -53101415 + MTD LTR MaLR 260 367 -54 2 1097 368 198 109 36 chr13 67182897 67183007 -53101305 + MT2B LTR ERVL 1 118 -415 2 1097 2879 131 28 18 chr13 67183032 67183469 -53100843 + BGLII_B LTR ERVK 1 441 0 2 1097 350 176 29 29 chr13 67183488 67183558 -53100754 + MT2B LTR ERVL 250 319 -282 2 1097 195 222 0 0 chr13 67183564 67183609 -53100703 + T-rich Low_complexity Low_complexity 1 45 0 3 1097 1120 102 0 0 chr13 67183609 67183756 -53100556 - B1_Mus2 SINE Alu 0 147 1 3 1097 1205 142 66 5 chr13 67183760 67183972 -53100340 + URR1A DNA MER1_type 2 226 0 3 1097 675 210 156 82 chr13 67183972 67184207 -53100105 + MT2B LTR ERVL 312 561 -40 2 1097 534 31 0 0 chr13 67184207 67184271 -53100041 + (CATA)n Simple_repeat Simple_repeat 4 67 0 3 1097 675 210 156 82 chr13 67184271 67184305 -53100007 + MT2B LTR ERVL 562 601 0 2 1097 318 180 0 16 chr13 67184305 67184367 -53099945 + MTD LTR MaLR 361 421 0 2 1097 1377 173 71 82 chr13 67184367 67184720 -53099592 + MTD-int LTR MaLR 1 349 -909 2 1097 657 331 34 22 chr13 67185093 67185471 -53098841 - RLTR14-int LTR ERV1 -1865 3452 3113 3 1097 733 169 15 15 chr13 67185700 67185832 -53098480 + MTC LTR MaLR 290 421 0 3 1097 5035 219 114 10 chr13 67185833 67187430 -53096882 + Lx9 LINE L1 5547 7445 -199 3 1097 1297 28 0 0 chr13 67187430 67187571 -53096741 + B1_Mm SINE Alu 1 141 -6 3 1097 216 0 0 0 chr13 67187572 67187596 -53096716 + (CAA)n Simple_repeat Simple_repeat 1 24 0 3 1097 290 228 38 0 chr13 67187684 67187763 -53096549 + Lx9 LINE L1 7562 7643 -1 3 1097 253 259 58 23 chr13 67187800 67187887 -53096425 + 4.5SRNA scRNA scRNA 2 91 -3 3 1097 832 278 33 14 chr13 67187889 67188101 -53096211 + B3 SINE B2 1 216 0 3 1097 233 349 94 8 chr13 67188353 67188375 -53095937 - B1F SINE Alu -11 138 1 3 1097 332 301 67 19 chr13 67188375 67188480 -53095832 - ID_B1 SINE B4 -33 191 82 3 1097 415 268 86 40 chr13 67188506 67188704 -53095608 - MTEa LTR MaLR -13 366 160 3 1097 2084 162 82 13 chr13 67189401 67189789 -53094523 - MTC LTR MaLR -6 415 1 3 1097 270 262 120 80 chr13 67192007 67192381 -53091931 + L1_Rod LINE L1 2337 2725 -3122 3 1097 872 27 18 0 chr13 67192402 67192512 -53091800 + (GGAAA)n Simple_repeat Simple_repeat 4 115 0 3 1097 1135 69 14 7 chr13 67192707 67192853 -53091459 + B1_Mus2 SINE Alu 1 147 0 3 1097 244 256 93 0 chr13 67192869 67192998 -53091314 + L1_Mur3 LINE L1 3389 3529 -2351 3 1097 22 35 0 0 chr13 67192999 67193028 -53091284 + AT_rich Low_complexity Low_complexity 1 29 0 3 1097 200 137 0 19 chr13 67193028 67193080 -53091232 + T-rich Low_complexity Low_complexity 1 51 0 3 1097 679 304 143 25 chr13 67193084 67193692 -53090620 + L1M3 LINE L1 3557 4236 -1904 3 1097 952 216 10 0 chr13 67193739 67193932 -53090380 + MTD LTR MaLR 16 210 -209 3 1097 612 160 6 23 chr13 67193932 67194052 -53090260 + B3 SINE B2 1 120 -73 3 1097 570 29 0 0 chr13 67194135 67194203 -53090109 + (GGAA)n Simple_repeat Simple_repeat 3 70 0 3 1097 420 207 11 16 chr13 67194209 67194301 -53090011 + MTD LTR MaLR 186 288 -133 3 1097 1446 128 68 0 chr13 67194301 67194550 -53089762 - RLTR22_Mus LTR ERVK 0 1808 1543 3 1097 5634 78 15 6 chr13 67194814 67195612 -53088700 - RLTR22_Mus LTR ERVK -1003 805 1 3 1097 464 243 43 81 chr13 67195612 67195763 -53088549 + MTD LTR MaLR 275 419 0 3 1097 447 311 60 60 chr13 67195765 67196505 -53087807 + L1_Mur3 LINE L1 4238 5005 -1135 3 1097 329 32 15 61 chr13 67196626 67196658 -53087654 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1097 1035 66 72 14 chr13 67196658 67196797 -53087515 + B1_Mm SINE Alu 1 147 0 3 1097 329 32 15 61 chr13 67196797 67196830 -53087482 + (CAAAAA)n Simple_repeat Simple_repeat 5 34 0 3 1097 1623 212 84 19 chr13 67196840 67197268 -53087044 + RLTR16 LTR ERVK 1 456 -49 3 1097 232 250 46 81 chr13 67197327 67197414 -53086898 + RLTR16 LTR ERVK 420 503 -2 3 1097 242 296 82 0 chr13 67197577 67197670 -53086642 - MTE2a LTR MaLR -4 375 275 3 1097 492 239 73 0 chr13 67197670 67197779 -53086533 + ORR1D1 LTR MaLR 1 117 -257 3 1097 281 26 26 0 chr13 67197779 67197817 -53086495 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1097 395 234 69 23 chr13 67198107 67198235 -53086077 - MTD LTR MaLR -14 405 272 3 1097 952 186 101 0 chr13 67198235 67198434 -53085878 + URR1B DNA MER1_type 1 219 -6 3 1097 432 335 29 48 chr13 67198450 67198657 -53085655 - MTD LTR MaLR -165 254 52 3 1097 377 271 60 60 chr13 67199197 67199410 -53084902 - MMSAT4 Satellite Satellite -5 213 1 3 1097 403 262 49 49 chr13 67199444 67199986 -53084326 - MMSAT4 Satellite Satellite 0 542 1 3 1097 5195 202 97 21 chr13 67201383 67202606 -53081706 + Lx9 LINE L1 6322 7637 -7 3 1097 484 212 40 0 chr13 67203439 67203538 -53080774 + B1_Mur2 SINE Alu 26 128 -21 3 1097 258 275 32 24 chr13 67203644 67203767 -53080545 - MurSatRep1 Unknown Unknown -1409 728 605 3 1097 435 136 48 96 chr13 67204295 67204482 -53079830 + RMER17C LTR ERVK 97 274 -136 3 1097 677 148 20 20 chr13 67204569 67204721 -53079591 + CT-rich Low_complexity Low_complexity 1 152 0 3 1097 612 268 126 57 chr13 67204751 67205226 -53079086 - L1_Rod LINE L1 -2389 3458 2951 3 1097 820 260 46 25 chr13 67205225 67205509 -53078803 + L1_Rod LINE L1 1792 2081 -3766 3 1097 700 142 0 29 chr13 67205511 67205631 -53078681 + BC1_Mm scRNA scRNA 1 116 -36 3 1097 995 129 20 20 chr13 67205631 67205781 -53078531 + B1_Mur4 SINE Alu 1 150 0 3 1097 700 142 0 29 chr13 67205781 67205798 -53078514 + BC1_Mm scRNA scRNA 117 133 -19 3 1097 229 329 14 41 chr13 67206734 67206807 -53077505 + ID4_ SINE ID 2 72 -11 3 1097 227 323 10 77 chr13 67207114 67207218 -53077094 + RSINE1 SINE B4 69 165 0 3 1097 292 338 72 14 chr13 67207312 67207450 -53076862 + B1F2 SINE Alu 4 149 0 3 1097 821 207 126 0 chr13 67207888 67208062 -53076250 + B3 SINE B2 1 196 -20 3 1097 333 0 0 0 chr13 67208064 67208101 -53076211 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1097 438 20 0 0 chr13 67208110 67208161 -53076151 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 1097 759 211 0 0 chr13 67210881 67211023 -53073289 - B1_Mus2 SINE Alu -1 146 5 3 1097 416 350 9 47 chr13 67211046 67211259 -53073053 - B3 SINE B2 0 216 12 3 1097 728 280 79 48 chr13 67211625 67211924 -53072388 + RLTR11B LTR ERVK 1 309 -144 3 1097 1136 108 0 0 chr13 67211924 67212082 -53072230 + B2_Mm2 SINE B2 1 158 -37 3 1097 495 0 0 0 chr13 67212083 67212138 -53072174 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 3 1097 261 57 0 0 chr13 67212156 67212191 -53072121 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1097 400 266 26 17 chr13 67214392 67214507 -53069805 + ID_B1 SINE B4 93 208 -16 3 1097 325 307 62 8 chr13 67214507 67214520 -53069792 + B1F SINE Alu 12 146 -3 3 1097 2061 142 42 11 chr13 67214956 67215312 -53069000 - RLTR9A LTR ERVK 0 368 2 3 1097 3233 195 68 80 chr13 67215598 67216057 -53068255 - ETnERV2-int LTR ERVK -984 6422 5999 3 1097 480 18 0 0 chr13 67216057 67216114 -53068198 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1097 3233 195 68 80 chr13 67216114 67216507 -53067805 - ETnERV2-int LTR ERVK -1408 5998 5582 3 1097 7855 55 2 15 chr13 67216524 67216909 -53067403 - L1_Mus2 LINE L1 0 6566 6195 3 1097 971 179 164 97 chr13 67216909 67217292 -53067020 + RLTR9E LTR ERVK 1 409 0 3 1097 29281 78 11 11 chr13 67217292 67218222 -53066090 - L1_Mus2 LINE L1 -372 6194 5241 3 1097 441 0 0 0 chr13 67218222 67218271 -53066041 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1097 29281 121 43 4 chr13 67218271 67222630 -53061682 - L1_Mus2 LINE L1 -643 5240 716 3 1097 247 224 28 56 chr13 67222635 67222706 -53061606 + RMER21B LTR ERV1 629 697 -145 3 1097 764 204 32 101 chr13 67222706 67222924 -53061388 - L1_Mus2 LINE L1 -5999 639 437 3 1097 2659 203 23 13 chr13 67222921 67223526 -53060786 - L1_Mur3 LINE L1 -1750 4130 3520 3 1097 2460 234 42 24 chr13 67223530 67223813 -53060499 - L1_Mur3 LINE L1 -3027 2850 2570 3 1097 3150 41 0 0 chr13 67223813 67224158 -53060154 + ORR1A1 LTR MaLR 1 345 -1 3 1097 261 0 0 0 chr13 67224158 67224187 -53060125 + (TG)n Simple_repeat Simple_repeat 1 29 0 3 1097 2460 234 42 24 chr13 67224187 67224619 -53059693 - L1_Mur3 LINE L1 -3308 2569 2122 3 1097 1249 242 34 87 chr13 67224694 67225052 -53059260 + ORR1B1 LTR MaLR 48 386 -8 3 1097 1401 180 3 33 chr13 67225056 67225302 -53059010 + ORR1B1-int LTR MaLR 1 238 -1725 3 1097 294 50 0 0 chr13 67225302 67225342 -53058970 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 3 1097 420 111 0 0 chr13 67225348 67225420 -53058892 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 1097 1401 180 3 33 chr13 67225420 67225470 -53058842 + ORR1B1-int LTR MaLR 245 295 -1668 3 1097 433 305 112 10 chr13 67225566 67225771 -53058541 + MTD LTR MaLR 1 226 -193 3 1097 210 118 0 0 chr13 67226261 67226295 -53058017 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1097 423 319 21 14 chr13 67226358 67226501 -53057811 - B1_Mus2 SINE Alu -2 145 2 3 1097 29 0 0 0 chr13 67226501 67226530 -53057782 + AT_rich Low_complexity Low_complexity 1 29 0 3 1097 202 178 44 0 chr13 67226532 67226577 -53057735 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 3 1097 1189 58 0 0 chr13 67226731 67226868 -53057444 - B1_Mus2 SINE Alu -9 138 2 3 1097 2491 169 4 47 chr13 67227339 67227811 -53056501 - RLTR11B LTR ERVK -1 452 1 3 1097 1155 57 0 34 chr13 67228461 67228607 -53055705 + B1_Mus2 SINE Alu 2 142 -5 3 1097 1640 259 62 21 chr13 67230346 67230859 -53053453 - RMER5 LTR ERV1 0 534 1 3 1097 675 231 32 11 chr13 67230973 67231161 -53053151 + L1_Rod LINE L1 3184 3375 -2472 3 1097 3141 61 5 30 chr13 67231190 67231593 -53052719 + MTA_Mm LTR MaLR 1 393 -3 3 1097 1587 238 152 3 chr13 67231594 67232172 -53052140 - L1_Rod LINE L1 -3635 2212 1549 3 1097 1610 204 48 116 chr13 67232203 67232507 -53051805 - RLTR20A LTR ERVK -71 470 191 3 1097 746 22 11 0 chr13 67232507 67232599 -53051713 + (TC)n Simple_repeat Simple_repeat 1 93 0 3 1097 1610 204 48 116 chr13 67232599 67232793 -53051519 - RLTR20A LTR ERVK -351 190 6 3 1097 1160 239 62 52 chr13 67232813 67233393 -53050919 - L1_Rod LINE L1 -4358 1489 925 3 1097 243 358 51 31 chr13 67235462 67235560 -53048752 + L2b LINE L2 3261 3360 -15 3 1097 375 372 43 31 chr13 67235584 67235906 -53048406 - MLT1C LTR MaLR -4 463 138 3 1097 994 60 3 10 chr13 67235881 67236019 -53048293 - ORR1A1 LTR MaLR -79 315 133 3 1097 1404 279 29 17 chr13 67236034 67236450 -53047862 + MTC LTR MaLR 1 421 0 3 1097 611 258 0 8 chr13 67236484 67236617 -53047695 - B3 SINE B2 -84 132 1 3 1097 1633 48 5 0 chr13 67236867 67237054 -53047258 - B2_Mm1t SINE B2 -5 188 1 3 1097 602 270 73 92 chr13 67237113 67237609 -53046703 - RLTR11B LTR ERVK -32 496 1 3 1097 23 0 0 0 chr13 67237624 67237647 -53046665 + AT_rich Low_complexity Low_complexity 1 23 0 3 1097 288 327 0 0 chr13 67237684 67237785 -53046527 + MurSatRep1 Unknown Unknown 644 744 -1393 3 1097 1726 219 3 23 chr13 67238437 67238779 -53045533 - Lx4A LINE L1 0 7058 6724 3 1097 1098 182 32 5 chr13 67238783 67239004 -53045308 - RLTR12B LTR ERVK -299 229 3 3 137 385 272 40 40 chr13 67239695 67240668 -53043644 + MMSAT4 Satellite Satellite 1 973 -1 3 1098 400 270 41 41 chr13 67240699 67241420 -53042892 + MMSAT4 Satellite Satellite 1 721 -1 3 1098 457 250 44 55 chr13 67241459 67241930 -53042382 + MMSAT4 Satellite Satellite 1 465 0 3 1098 781 303 79 19 chr13 67242168 67242552 -53041760 + ORR1C1-int LTR MaLR 1154 1568 -12 3 1098 214 276 86 0 chr13 67242598 67242656 -53041656 + RSINE1 SINE B4 65 127 -38 3 1098 447 350 62 9 chr13 67242784 67243009 -53041303 + MTE2b LTR MaLR 41 277 -102 4 1098 1877 197 29 37 chr13 67243009 67243389 -53040923 + ORR1C1 LTR MaLR 1 377 -1 3 1098 2153 140 19 0 chr13 67243397 67243718 -53040594 + ORR1A2 LTR MaLR 1 327 0 4 1098 10095 157 78 11 chr13 67243718 67245558 -53038754 + ORR1A2-int LTR MaLR 1 1963 0 4 1098 2135 132 3 0 chr13 67245558 67245876 -53038436 + ORR1A2 LTR MaLR 1 319 -8 4 1098 1735 177 76 6 chr13 67246112 67246643 -53037669 - MYSERV6-int LTR ERVK -321 8638 8071 4 1098 1879 202 72 58 chr13 67246647 67247094 -53037218 + RLTR11A LTR ERVK 4 456 -72 4 1098 204 312 0 0 chr13 67247101 67247149 -53037163 + (CATG)n Simple_repeat Simple_repeat 1 48 0 4 1098 245 235 29 14 chr13 67247149 67247218 -53037094 + RLTR11A LTR ERVK 459 528 0 4 1098 444 130 25 25 chr13 67247800 67247918 -53036394 + (TA)n Simple_repeat Simple_repeat 2 119 0 4 1098 3754 215 6 25 chr13 67248263 67249115 -53035197 + MYSERV16_I-int LTR ERVK 1 772 -1554 4 1098 556 244 0 0 chr13 67249131 67249246 -53035066 - Lx3C LINE L1 -136 6840 6726 4 1098 621 228 22 0 chr13 67249240 67249376 -53034936 - Lx2B LINE L1 -945 6055 5917 4 1098 2783 224 25 40 chr13 67249445 67249906 -53034406 + L1_Mus2 LINE L1 492 948 -5709 4 1098 4690 14 0 2 chr13 67249906 67250400 -53033912 + MT2_Mm LTR ERVL 1 493 0 4 1098 29753 114 13 6 chr13 67250400 67255860 -53028452 + L1_Mus2 LINE L1 949 6381 -185 4 1098 248 133 43 22 chr13 67255860 67255906 -53028406 - RMER17C LTR ERVK -361 49 3 4 1098 34244 77 1 16 chr13 67256003 67261373 -53022939 + L1Md_F LINE L1 300 5586 -297 4 1098 8646 48 4 0 chr13 67261373 67262361 -53021951 + L1Md_F2 LINE L1 5587 6578 -4 4 1098 34244 67 0 1 chr13 67262361 67262375 -53021937 + L1Md_F LINE L1 5587 5600 -283 4 1098 21 0 0 0 chr13 67263008 67263029 -53021283 + AT_rich Low_complexity Low_complexity 1 21 0 4 1098 1449 166 34 61 chr13 67263082 67263127 -53021185 - ORR1B1 LTR MaLR -8 386 344 4 1098 1370 36 112 12 chr13 67263127 67263297 -53021015 - B2_Mm1a SINE B2 -5 188 2 4 1098 1449 166 34 61 chr13 67263297 67263547 -53020765 - ORR1B1 LTR MaLR -51 343 99 4 1098 289 180 33 0 chr13 67263626 67263687 -53020625 - LTR23-int LTR ERV1 -4067 1056 994 4 1098 959 251 78 0 chr13 67263726 67263945 -53020367 + RMER1A Other Other 198 433 -597 4 1098 324 244 70 0 chr13 67264359 67264445 -53019867 + ID_B1 SINE B4 95 186 -38 4 1098 985 97 0 0 chr13 67264440 67264574 -53019738 + B1_Mus1 SINE Alu 15 148 0 4 1098 713 171 233 0 chr13 67266041 67266217 -53018095 - URR1B DNA MER1_type -8 217 1 4 1098 1774 297 78 29 chr13 67266542 67267345 -53016967 + Lx9 LINE L1 6539 7381 -263 4 1098 1595 223 94 5 chr13 67268284 67268667 -53015645 - MTD LTR MaLR 0 419 3 4 1098 324 244 32 32 chr13 67268740 67268863 -53015449 + MurSatRep1 Unknown Unknown 606 728 -1409 4 1098 805 128 17 0 chr13 67269105 67269222 -53015090 + PB1D9 SINE Alu 2 120 0 4 1098 627 130 0 0 chr13 67269222 67269322 -53014990 + (GA)n Simple_repeat Simple_repeat 1 100 0 4 1098 306 0 0 0 chr13 67270224 67270258 -53014054 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 1098 1024 276 29 14 chr13 67270695 67271041 -53013271 - RLTR42-int LTR ERVK -4122 1400 1050 4 1098 396 0 0 0 chr13 67271314 67271358 -53012954 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1098 422 313 65 5 chr13 67273285 67273500 -53010812 - RLTR42-int LTR ERVK -4122 1400 1173 4 1098 1483 86 0 5 chr13 67274993 67275180 -53009132 - B2_Mm2 SINE B2 -9 186 1 4 1098 890 312 53 28 chr13 67276497 67276929 -53007383 + Lx9 LINE L1 6540 6982 -662 4 1098 350 300 51 103 chr13 67277092 67277326 -53006986 + Lx9 LINE L1 6953 7174 -470 4 1098 295 271 0 0 chr13 67277414 67277499 -53006813 + MurSatRep1 Unknown Unknown 644 728 -1409 4 1098 348 234 34 51 chr13 67278686 67278803 -53005509 - RLTR42-int LTR ERVK -2660 2862 2748 4 1098 1041 259 29 61 chr13 67278785 67279163 -53005149 - RLTR42-int LTR ERVK -3032 2490 2125 4 1098 727 232 141 0 chr13 67279347 67279532 -53004780 + B3 SINE B2 3 213 -3 4 1098 695 281 15 0 chr13 67280716 67280915 -53003397 - RLTR42-int LTR ERVK -4122 1400 1199 4 1098 504 273 28 21 chr13 67281858 67282000 -53002312 + B1_Mur3 SINE Alu 2 144 -5 4 1098 429 244 30 30 chr13 67282755 67282886 -53001426 + MMSAT4 Satellite Satellite 37 167 -1 4 1098 332 243 21 21 chr13 67282922 67283062 -53001250 + MMSAT4 Satellite Satellite 1 140 0 4 1098 409 276 33 33 chr13 67283169 67283559 -53000753 + MMSAT4 Satellite Satellite 1 390 0 4 1098 251 290 41 44 chr13 67283673 67283890 -53000422 + MMSAT4 Satellite Satellite 1 216 0 4 1098 970 212 86 67 chr13 67284042 67284373 -52999939 + RLTR31A_Mm LTR ERVK 205 584 0 4 1098 290 341 122 40 chr13 67284454 67284756 -52999556 + RMER5 LTR ERV1 140 466 -68 4 1098 1197 259 17 57 chr13 67285284 67285690 -52998622 + RLTR42-int LTR ERVK 2121 2510 -3012 4 1098 1694 27 21 0 chr13 67286193 67286379 -52997933 - B2_Mm1t SINE B2 -2 191 2 4 1098 1028 340 61 24 chr13 67286504 67287246 -52997066 + Lx8 LINE L1 6440 7208 -265 4 1098 1767 175 9 67 chr13 67287294 67287763 -52996549 - RMER17C LTR ERVK -519 439 16 4 1098 1397 193 36 11 chr13 67290758 67291036 -52993276 - ORR1B1 LTR MaLR -14 380 96 4 1098 304 191 29 29 chr13 67291111 67291181 -52993131 - LTR23-int LTR ERV1 -4067 1056 987 4 1098 872 244 21 0 chr13 67291207 67291426 -52992886 + RMER1A Other Other 3 434 -596 4 1098 21 0 0 0 chr13 67291826 67291847 -52992465 + AT_rich Low_complexity Low_complexity 1 21 0 4 1098 236 391 59 18 chr13 67292690 67292909 -52991403 + MTE2b LTR MaLR 13 240 -139 4 1098 789 274 62 10 chr13 67293374 67293662 -52990650 - ORR1D1 LTR MaLR -60 314 12 4 1098 529 322 172 49 chr13 67293672 67294533 -52989779 + MTE-int LTR MaLR 508 1474 -106 4 1098 187 283 49 16 chr13 67296422 67296483 -52987829 + L2 LINE L2 67 129 -3290 4 1098 1311 48 0 0 chr13 67297614 67297761 -52986551 + B1_Mus2 SINE Alu 1 147 0 4 1098 21 0 0 0 chr13 67298004 67298025 -52986287 + AT_rich Low_complexity Low_complexity 1 21 0 4 1098 982 298 64 31 chr13 67298551 67298974 -52985338 + Lx9 LINE L1 6546 6982 -662 4 1098 374 295 51 103 chr13 67299176 67299410 -52984902 + Lx9 LINE L1 6953 7174 -470 4 1098 299 240 20 20 chr13 67299486 67299584 -52984728 + MurSatRep1 Unknown Unknown 631 728 -1409 4 1098 1190 128 0 39 chr13 67301016 67301220 -52983092 - L1Md_F2 LINE L1 -4 6578 6383 4 1098 2087 225 65 84 chr13 67301703 67302455 -52981857 - RLTR42-int LTR ERVK -2660 2862 2125 4 1098 529 118 0 0 chr13 67302577 67302662 -52981650 - Lx LINE L1 -1 6653 6569 4 1098 960 150 84 21 chr13 67302747 67302938 -52981374 - Lx LINE L1 -90 6564 6362 4 1098 897 200 136 5 chr13 67302989 67303180 -52981132 + B3 SINE B2 1 216 0 4 1098 311 301 49 0 chr13 67303187 67303310 -52981002 - RLTR42-int LTR ERVK -3505 2017 1889 4 1098 23 78 0 0 chr13 67303695 67303746 -52980566 + AT_rich Low_complexity Low_complexity 1 51 0 4 1098 1135 253 31 20 chr13 67304681 67305032 -52979280 - RLTR42-int LTR ERVK -4122 1400 1046 4 1098 582 247 14 0 chr13 67307012 67307158 -52977154 + B1_Mur3 SINE Alu 2 149 0 4 1098 441 265 39 39 chr13 67307905 67308205 -52976107 + MMSAT4 Satellite Satellite 1 300 0 4 1098 382 263 53 53 chr13 67308319 67308778 -52975534 + MMSAT4 Satellite Satellite 1 459 0 4 1098 642 236 21 59 chr13 67309858 67310097 -52974215 + RLTR42-int LTR ERVK 2121 2350 -3172 4 1098 254 100 100 0 chr13 67310335 67310375 -52973937 + Lx8 LINE L1 6446 6489 -984 4 1098 2035 127 79 12 chr13 67310429 67310772 -52973540 - RLTR9D LTR ERVK -37 366 1 4 1098 448 122 28 12 chr13 67310773 67310857 -52973455 - ETnERV2-int LTR ERVK -2 7404 7331 4 1098 942 234 15 5 chr13 67311059 67311261 -52973051 - ETnERV2-int LTR ERVK -981 6425 6222 4 1098 6626 110 3 8 chr13 67311309 67312223 -52972089 - ETnERV2-int LTR ERVK -1179 6227 5318 4 1098 1531 165 61 5 chr13 67312191 67312475 -52971837 - ETnERV2-int LTR ERVK -3065 4341 4083 4 1098 4153 109 15 7 chr13 67312514 67313125 -52971187 - ETnERV2-int LTR ERVK -4292 3114 2499 4 1098 5956 142 67 46 chr13 67313123 67314288 -52970024 - ETnERV2-int LTR ERVK -5165 2241 1053 4 1098 34 42 0 0 chr13 67314288 67314336 -52969976 + AT_rich Low_complexity Low_complexity 1 48 0 4 1098 1096 225 39 9 chr13 67314501 67314525 -52969787 + MTC LTR MaLR 178 204 -217 4 1098 735 12 0 0 chr13 67314525 67314609 -52969703 + (CAAAA)n Simple_repeat Simple_repeat 4 87 0 4 1098 1096 225 39 9 chr13 67314609 67314817 -52969495 + MTC LTR MaLR 205 417 -4 4 1098 366 230 11 22 chr13 67315102 67315191 -52969121 - RLTR31_Mur LTR ERVK -5 548 461 4 1098 387 263 35 17 chr13 67315211 67315327 -52968985 - Lx9 LINE L1 -217 7427 7310 4 1098 425 289 19 19 chr13 67315363 67315518 -52968794 - Lx9 LINE L1 -405 7239 7085 4 1098 559 165 0 0 chr13 67315959 67316050 -52968262 + MYSERV6-int LTR ERVK 6690 6780 -2179 4 1098 3702 161 31 24 chr13 67316043 67316751 -52967561 + MYSERV6-int LTR ERVK 7335 8047 -912 4 1098 565 283 69 127 chr13 67316753 67317202 -52967110 - RLTR23 LTR ERV1 0 430 8 4 1098 1740 118 262 21 chr13 67317224 67317400 -52966912 + MYSERV6-int LTR ERVK 8043 8269 -690 4 1098 3652 88 103 10 chr13 67317400 67317916 -52966396 + LTRIS2 LTR ERV1 1 564 0 4 1098 1740 118 38 28 chr13 67317916 67318062 -52966250 + MYSERV6-int LTR ERVK 8270 8409 -550 4 1098 495 68 0 26 chr13 67318550 67318616 -52965696 + L1Md_F3 LINE L1 6498 6563 -21 4 1098 219 69 0 0 chr13 67318616 67318645 -52965667 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 1098 20261 81 274 10 chr13 67318723 67322977 -52961335 + L1Md_F3 LINE L1 217 5586 -297 4 1098 8903 28 6 2 chr13 67322977 67323969 -52960343 + L1Md_F3 LINE L1 5587 6582 -2 4 1098 402 205 122 32 chr13 67324087 67324243 -52960069 + L1MB1 LINE L1 5254 5423 -877 4 1098 462 325 73 9 chr13 67324264 67324606 -52959706 + L1MB1 LINE L1 5541 5904 -285 4 1098 511 313 100 33 chr13 67324628 67324929 -52959383 + L1MA10 LINE L1 5996 6316 -18 4 1098 734 0 12 0 chr13 67324947 67325033 -52959279 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 4 1098 2132 83 18 63 chr13 67326765 67327099 -52957213 - ORR1A2 LTR MaLR -8 319 1 4 1098 747 314 130 31 chr13 67327975 67328451 -52955861 - MER89 LTR ERV1 -9 550 28 4 1098 1719 42 0 0 chr13 67329916 67330109 -52954203 + B2_Mm1a SINE B2 1 193 0 4 1098 3524 65 62 5 chr13 67330729 67331178 -52953134 - MT2C_Mm LTR ERVL 0 475 1 4 1098 910 258 165 24 chr13 67331676 67331932 -52952380 - ORR1C2 LTR MaLR -3 381 91 4 1098 1430 87 27 5 chr13 67331932 67332117 -52952195 - B2_Mm2 SINE B2 -4 191 3 4 1098 910 258 165 24 chr13 67332117 67332194 -52952118 - ORR1C2 LTR MaLR -294 90 1 4 1098 598 323 6 66 chr13 67332253 67332419 -52951893 + RSINE1 SINE B4 3 158 -7 4 1098 1497 106 42 12 chr13 67332474 67332778 -52951534 + RLTR4_Mm LTR ERV1 1 274 -468 4 1098 2149 42 20 24 chr13 67332755 67333048 -52951264 + RLTR4_Mm LTR ERV1 451 742 0 4 1098 306 0 0 0 chr13 67333291 67333325 -52950987 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1098 1125 60 8 0 chr13 67333326 67333460 -52950852 - B1_Mus1 SINE Alu -13 135 1 4 1098 4226 137 5 5 chr13 67333980 67334581 -52949731 + MT2B LTR ERVL 1 601 0 4 1098 3005 19 0 0 chr13 67334838 67335160 -52949152 + RLTRETN_Mm LTR ERVK 1 322 0 4 1098 41355 30 5 12 chr13 67335160 67340038 -52944274 + MMETn-int LTR ERVK 1 4844 0 4 1098 2993 22 0 0 chr13 67340038 67340360 -52943952 + RLTRETN_Mm LTR ERVK 1 322 0 4 1098 2629 135 39 0 chr13 67340540 67340947 -52943365 + Lx2B LINE L1 6561 6983 -17 4 1098 237 128 0 0 chr13 67340953 67341000 -52943312 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1098 639 13 0 0 chr13 67341002 67341080 -52943232 - B1_Mm SINE Alu 0 147 70 4 1098 787 172 275 12 chr13 67341615 67341786 -52942526 - B3 SINE B2 0 216 1 4 1098 374 287 133 46 chr13 67342066 67342198 -52942114 + Lx9 LINE L1 7344 7476 -168 5 1098 315 0 0 0 chr13 67342198 67342233 -52942079 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1098 459 0 0 0 chr13 67342233 67342283 -52942029 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1098 374 287 133 46 chr13 67342283 67342412 -52941900 + Lx9 LINE L1 7477 7628 -16 5 1098 346 336 95 47 chr13 67342558 67342811 -52941501 + HAL1 LINE L1 279 543 -1964 5 1098 372 259 126 105 chr13 67342811 67343001 -52941311 + B4 SINE B4 2 195 -97 5 1098 1648 87 57 20 chr13 67343006 67343253 -52941059 - Lx LINE L1 -1 6653 6398 5 1098 1027 158 97 5 chr13 67343267 67343397 -52940915 + L1_Mm LINE L1 5261 5402 -481 5 1098 4932 53 5 5 chr13 67343397 67343984 -52940328 - LTRIS_Mus LTR ERV1 0 587 1 5 1098 1027 158 97 5 chr13 67343984 67344069 -52940243 + L1_Mm LINE L1 5403 5495 -388 5 1098 495 0 0 0 chr13 67344631 67344686 -52939626 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 5 1098 903 100 23 0 chr13 67344919 67345049 -52939263 + MTB_Mm LTR MaLR 2 134 -273 5 1098 1205 149 117 5 chr13 67345039 67345261 -52939051 + ORR1A3 LTR MaLR 80 326 0 5 1098 251 301 74 48 chr13 67345427 67345657 -52938655 - L1M4 LINE L1 -1021 5125 4890 5 1098 6340 47 0 0 chr13 67345653 67346412 -52937900 + L1Md_F2 LINE L1 4828 5586 -297 5 1098 8492 47 12 2 chr13 67346412 67347396 -52936916 + L1Md_F2 LINE L1 5587 6580 -2 5 1098 529 152 190 10 chr13 67347407 67347507 -52936805 + PB1D9 SINE Alu 3 120 0 5 1098 441 172 43 11 chr13 67347846 67347940 -52936372 + RMER6B LTR ERVK 365 461 0 5 1098 873 191 30 94 chr13 67347940 67348071 -52936241 - ORR1B1 LTR MaLR -205 189 65 5 1098 1263 108 17 6 chr13 67348071 67348248 -52936064 - B2_Mm2 SINE B2 -14 181 3 5 1098 873 196 22 117 chr13 67348248 67348366 -52935946 - ORR1B1 LTR MaLR -330 64 1 5 1098 337 331 38 23 chr13 67348432 67348565 -52935747 + Lx6 LINE L1 6919 7053 -407 5 1098 902 254 45 61 chr13 67348573 67348837 -52935475 - RMER13A LTR ERVK -597 263 4 5 1098 5652 117 33 70 chr13 67348842 67349543 -52934769 + Lx4A LINE L1 1592 2269 -3608 5 1098 430 57 14 14 chr13 67349543 67349614 -52934698 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 5 1098 5652 117 33 70 chr13 67349614 67350004 -52934308 + Lx4A LINE L1 2270 2642 -3235 5 1098 6794 126 38 12 chr13 67350001 67351133 -52933179 + Lx4A LINE L1 4103 5263 -614 5 1098 2612 54 6 0 chr13 67351133 67351468 -52932844 + ORR1A1 LTR MaLR 1 337 -9 5 1098 11165 141 47 36 chr13 67351510 67353450 -52930862 + ORR1A1-int LTR MaLR 1 1963 0 5 1098 2957 58 3 3 chr13 67353450 67353796 -52930516 + ORR1A1 LTR MaLR 1 346 0 5 1098 4847 147 54 39 chr13 67353796 67354902 -52929410 + Lx4A LINE L1 5259 6385 -673 5 1098 309 151 0 0 chr13 67354996 67355049 -52929263 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1098 594 124 0 0 chr13 67355052 67355173 -52929139 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 5 1098 1524 124 60 37 chr13 67355173 67355235 -52929077 + Lx4A LINE L1 6374 6448 -610 5 1098 1106 253 134 62 chr13 67355235 67355706 -52928606 + RLTR16 LTR ERVK 1 505 0 5 1098 1524 124 60 37 chr13 67355706 67355911 -52928401 + Lx4A LINE L1 6449 6647 -411 5 1098 407 215 80 75 chr13 67356872 67357331 -52926981 - MMSAT4 Satellite Satellite -10 460 1 5 1098 373 240 48 51 chr13 67357470 67357923 -52926389 - MMSAT4 Satellite Satellite -21 451 1 5 1098 322 376 14 19 chr13 67357875 67358084 -52926228 - MurSatRep1 Unknown Unknown -184 1953 1746 5 1098 483 265 45 44 chr13 67357954 67359083 -52925229 - MMSAT4 Satellite Satellite -1 1130 1 5 1098 432 0 0 0 chr13 67359469 67359517 -52924795 + (TA)n Simple_repeat Simple_repeat 1 48 0 5 1098 2082 235 18 79 chr13 67359661 67360215 -52924097 + RLTR12B LTR ERVK 3 522 -6 5 1098 320 286 0 0 chr13 67361063 67361161 -52923151 - MurSatRep1 Unknown Unknown -1409 728 631 5 1098 840 246 4 55 chr13 67361212 67361466 -52922846 + RLTR11B LTR ERVK 1 241 -212 5 1098 1485 92 0 5 chr13 67361509 67361695 -52922617 - B2_Mm2 SINE B2 -9 186 2 5 1098 672 48 0 0 chr13 67361896 67361980 -52922332 + (TTCTG)n Simple_repeat Simple_repeat 4 87 0 5 1098 1273 36 0 0 chr13 67361980 67362120 -52922192 - B1_Mus1 SINE Alu -8 140 1 5 1098 245 290 81 64 chr13 67362255 67362428 -52921884 - RLTR42 LTR ERVK -2 237 62 5 1098 2300 257 107 13 chr13 67363478 67364679 -52919633 + L1_Rod LINE L1 934 2245 -3602 5 1098 713 300 26 108 chr13 67364680 67365170 -52919142 - L1_Rod LINE L1 -2472 3375 2926 5 1098 1214 225 51 99 chr13 67365197 67365744 -52918568 + L1_Rod LINE L1 3405 3925 -1922 5 1098 852 299 39 132 chr13 67365747 67366255 -52918057 + RLTR18B LTR ERVK 50 510 -2 5 1098 3328 132 53 2 chr13 67366338 67366868 -52917444 + Lx4A LINE L1 6502 7058 0 5 1098 11759 162 21 19 chr13 67367056 67368149 -52916163 + L1_Mur2 LINE L1 3614 4723 -1154 5 1098 294 29 0 0 chr13 67368149 67368184 -52916128 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1098 11759 162 21 19 chr13 67368184 67369303 -52915009 + L1_Mur2 LINE L1 4724 5832 -45 5 1098 602 168 10 0 chr13 67369305 67369406 -52914906 - RMER19C LTR ERVK 0 611 510 5 1098 1680 37 5 0 chr13 67370532 67370721 -52913591 + B2_Mm1t SINE B2 3 192 -1 5 1099 394 312 116 4 chr13 67371851 67372013 -52912299 + B3A SINE B2 4 177 -39 5 1099 273 57 0 0 chr13 67372013 67372048 -52912264 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 5 1099 389 330 99 16 chr13 67372048 67372067 -52912245 + B3 SINE B2 178 199 -17 5 1099 309 218 0 0 chr13 67372079 67372157 -52912155 + (TA)n Simple_repeat Simple_repeat 1 78 0 5 1099 492 328 0 0 chr13 67372180 67372314 -52911998 + B1_Mus1 SINE Alu 11 144 -4 5 1099 1270 87 87 0 chr13 67372362 67372546 -52911766 + MTB LTR MaLR 1 200 -200 5 1099 455 116 0 0 chr13 67372546 67372615 -52911697 + L1_Mur3 LINE L1 1540 1608 -4272 5 1099 39100 10 2 7 chr13 67372618 67377823 -52906489 + L1Md_A LINE L1 415 5586 -297 5 1099 9464 11 0 0 chr13 67377823 67378819 -52905493 + L1Md_A LINE L1 5587 6582 0 5 1099 544 152 9 19 chr13 67378869 67378976 -52905336 + Lx2B LINE L1 6892 6997 -3 5 1099 876 46 0 0 chr13 67379042 67379151 -52905161 + (GAA)n Simple_repeat Simple_repeat 2 110 0 5 1099 459 0 0 0 chr13 67379151 67379202 -52905110 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1099 3837 167 129 35 chr13 67380015 67380622 -52903690 - RMER19B LTR ERVK -13 889 249 5 1099 1211 133 31 16 chr13 67380622 67380813 -52903499 - B2_Mm2 SINE B2 -1 194 1 5 1099 3837 167 129 35 chr13 67380813 67381017 -52903295 - RMER19B LTR ERVK -654 248 1 5 1099 2575 167 46 53 chr13 67381864 67382409 -52901903 + RLTR20A LTR ERVK 1 541 0 5 1099 410 224 0 0 chr13 67382993 67383078 -52901234 - RMER21B LTR ERV1 0 842 758 5 1099 2467 222 147 17 chr13 67383078 67383737 -52900575 - RMER21B LTR ERV1 -19 823 79 5 1099 475 208 97 70 chr13 67383979 67384165 -52900147 + RLTR42-int LTR ERVK 1122 1312 -4210 5 1099 388 231 244 16 chr13 67384175 67384298 -52900014 + RLTR12B LTR ERVK 12 162 -406 5 1099 3824 75 25 13 chr13 67384333 67384887 -52899425 + RMER2 LTR ERV1 1 561 -6 5 1099 543 243 9 0 chr13 67384894 67385005 -52899307 + ORR1B1 LTR MaLR 146 257 -137 5 1099 419 232 0 112 chr13 67385117 67385224 -52899088 + MurERV4-int LTR ERVK 4543 4637 -623 5 1099 373 186 134 116 chr13 67385224 67385388 -52898924 - RLTR13D3 LTR ERVK 0 1114 948 5 1099 1771 31 0 0 chr13 67385767 67385959 -52898353 - B2_Mm1t SINE B2 -1 192 1 5 1099 1559 285 65 93 chr13 67386055 67386949 -52897363 + MYSERV-int LTR ERVK 3907 4775 -1775 5 1099 817 124 0 127 chr13 67386984 67387141 -52897171 + ORR1A3 LTR MaLR 1 137 -189 5 1099 1183 196 84 128 chr13 67387374 67387779 -52896533 + RMER10B LTR ERVL 1 387 -11 5 1099 1107 126 0 0 chr13 67388834 67389025 -52895287 + MYSERV6-int LTR ERVK 7857 8047 -912 5 1099 878 276 47 119 chr13 67389027 67389479 -52894833 - RLTR23 LTR ERV1 0 430 12 5 1099 4597 166 41 5 chr13 67389504 67390388 -52893924 + MYSERV6-int LTR ERVK 8043 8958 -1 5 1099 793 217 99 51 chr13 67390388 67390765 -52893547 + RMER6B LTR ERVK 1 461 0 5 1099 714 201 57 17 chr13 67390765 67390942 -52893370 - ORR1B1 LTR MaLR -205 189 6 5 1099 973 297 82 12 chr13 67390945 67391361 -52892951 + Lx6 LINE L1 6785 7229 -231 5 1099 4570 176 141 1 chr13 67391448 67392382 -52891930 + RLTR25A LTR ERVK 20 1084 -19 5 1099 3464 21 0 0 chr13 67392697 67393118 -52891194 - L1_Mm LINE L1 -835 5048 4628 5 1099 3463 41 0 0 chr13 67393118 67393563 -52890749 + L1Md_T LINE L1 6169 6582 0 5 1099 343 258 42 44 chr13 67393586 67394469 -52889843 - MMSAT4 Satellite Satellite -1 881 1 5 1099 378 243 45 45 chr13 67394510 67394973 -52889339 - MMSAT4 Satellite Satellite -1 463 1 5 1099 307 277 16 16 chr13 67395098 67395219 -52889093 - MMSAT4 Satellite Satellite -1 167 47 5 1099 204 163 0 0 chr13 67395664 67395707 -52888605 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1099 1211 186 9 5 chr13 67395859 67396080 -52888232 + RLTR12B LTR ERVK 3 224 -304 5 1099 416 35 17 0 chr13 67396080 67396138 -52888174 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1099 1046 251 23 15 chr13 67396138 67396401 -52887911 + RLTR12B LTR ERVK 258 522 -6 5 1099 21 0 0 0 chr13 67397099 67397120 -52887192 + AT_rich Low_complexity Low_complexity 1 21 0 5 1099 649 250 89 53 chr13 67397402 67397682 -52886630 + RLTR11B LTR ERVK 1 300 -145 5 1099 901 225 115 18 chr13 67397685 67398006 -52886306 + RMER17B LTR ERVK 355 685 -273 5 1099 9335 72 0 15 chr13 67398006 67399315 -52884997 - MMETn-int LTR ERVK -3492 1352 64 5 1099 639 299 48 135 chr13 67399315 67399377 -52884935 + RMER13B LTR ERVK 554 609 -299 5 1099 1978 113 12 51 chr13 67399377 67399712 -52884600 - RLTRETN_Mm LTR ERVK 0 322 1 5 1099 639 299 48 135 chr13 67399712 67400028 -52884284 + RMER13B LTR ERVK 610 898 -10 5 1099 2284 248 92 11 chr13 67400630 67401289 -52883023 + L1_Rod LINE L1 934 1595 -4252 5 1099 186 118 0 0 chr13 67401289 67401323 -52882989 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1099 2284 238 136 10 chr13 67401323 67401836 -52882476 + L1_Rod LINE L1 1596 2222 -3625 5 1099 398 242 63 30 chr13 67401878 67402146 -52882166 - L1_Rod LINE L1 -2499 3348 3072 5 1099 666 263 69 104 chr13 67402376 67402705 -52881607 + L1_Rod LINE L1 3405 3703 -2144 5 1099 1107 91 0 0 chr13 67402705 67402848 -52881464 + B1_Mus1 SINE Alu 1 143 -5 5 1099 666 263 69 104 chr13 67402848 67403083 -52881229 + L1_Rod LINE L1 3704 3949 -1898 5 1099 357 125 0 0 chr13 67403110 67403166 -52881146 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 5 1099 3896 76 19 35 chr13 67403215 67403464 -52880848 + RMER2 LTR ERV1 1 246 -321 5 1099 2720 58 6 0 chr13 67403464 67403808 -52880504 - ORR1A1 LTR MaLR 0 346 1 5 1099 3896 76 19 35 chr13 67403808 67404130 -52880182 + RMER2 LTR ERV1 247 563 -4 5 1099 445 0 0 0 chr13 67404870 67404928 -52879384 - L1Md_T LINE L1 0 6582 6525 5 1099 406 293 24 16 chr13 67405048 67405173 -52879139 - ID_B1 SINE B4 -5 219 94 5 1099 504 0 0 0 chr13 67405580 67405636 -52878676 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1099 1676 273 48 8 chr13 67405654 67406153 -52878159 + RMER5 LTR ERV1 1 519 -15 5 1099 2553 125 15 72 chr13 67408526 67409000 -52875312 + RLTR11B LTR ERVK 1 447 -6 5 1099 243 0 0 0 chr13 67409610 67409637 -52874675 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1099 26 0 0 0 chr13 67409651 67409677 -52874635 + AT_rich Low_complexity Low_complexity 1 26 0 6 1099 432 310 23 8 chr13 67409690 67409820 -52874492 + B1_Mus1 SINE Alu 11 142 -6 6 1099 225 94 0 0 chr13 67409895 67409927 -52874385 + (TA)n Simple_repeat Simple_repeat 1 32 0 6 1099 275 368 26 26 chr13 67410429 67410640 -52873672 - MTD LTR MaLR -210 211 1 6 1099 1492 221 35 50 chr13 67410753 67411153 -52873159 - ORR1B1 LTR MaLR 0 394 1 6 1099 647 184 35 28 chr13 67411155 67411300 -52873012 - ORR1B1-int LTR MaLR -2 1368 1223 6 1099 2749 226 221 110 chr13 67411283 67412106 -52872206 - ORR1B1-int LTR MaLR -432 1531 442 6 1099 180 0 0 0 chr13 67412106 67412126 -52872186 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 6 1099 2749 226 221 110 chr13 67412126 67412305 -52872007 - ORR1B1-int LTR MaLR -1522 441 251 6 1099 288 0 0 0 chr13 67412305 67412337 -52871975 + (CA)n Simple_repeat Simple_repeat 2 33 0 6 1099 2749 226 221 110 chr13 67412337 67412710 -52871602 - ORR1B1-int LTR MaLR -1713 250 2 6 1099 1235 186 81 103 chr13 67412714 67413062 -52871250 - ORR1B1 LTR MaLR -8 386 47 6 1099 1992 206 22 44 chr13 67413156 67413745 -52870567 + L1_Mur3 LINE L1 2146 2721 -3159 6 1099 1378 130 0 14 chr13 67413750 67413969 -52870343 + BGLII_B LTR ERVK 226 441 0 6 1099 1892 210 74 41 chr13 67414008 67414519 -52869793 - RLTR11A LTR ERVK 0 528 1 6 1099 2824 160 42 5 chr13 67414523 67415077 -52869235 + MYSERV6-int LTR ERVK 8073 8646 -313 6 1099 653 315 67 48 chr13 67415237 67415315 -52868997 - MTE2b LTR MaLR -25 354 278 6 1099 1282 254 33 25 chr13 67415315 67415683 -52868629 - ORR1C1 LTR MaLR -3 375 5 6 1099 653 315 67 48 chr13 67415683 67415917 -52868395 - MTE2b LTR MaLR -102 277 36 6 1099 852 254 89 25 chr13 67416189 67416550 -52867762 - ORR1B1-int LTR MaLR -39 1541 1152 6 1099 305 241 63 47 chr13 67416869 67417064 -52867248 - MMSAT4 Satellite Satellite 0 198 1 6 1099 395 258 38 38 chr13 67417218 67418592 -52865720 - MMSAT4 Satellite Satellite -20 1374 1 6 1099 299 289 42 35 chr13 67418627 67418916 -52865396 - MMSAT4 Satellite Satellite -1 291 1 6 1099 26 0 0 0 chr13 67419315 67419341 -52864971 + AT_rich Low_complexity Low_complexity 1 26 0 6 1099 2480 208 30 10 chr13 67419464 67419969 -52864343 + RLTR12B LTR ERVK 3 517 -11 6 1099 25 0 0 0 chr13 67419980 67420005 -52864307 + AT_rich Low_complexity Low_complexity 1 25 0 6 1099 2553 208 17 13 chr13 67420177 67420337 -52863975 + Lx4A LINE L1 6514 6680 -378 6 1099 3098 20 0 0 chr13 67420337 67420683 -52863629 + ORR1A0 LTR MaLR 1 346 0 6 1099 2553 208 17 13 chr13 67420683 67421062 -52863250 + Lx4A LINE L1 6681 7055 -3 6 1099 234 128 0 0 chr13 67421064 67421103 -52863209 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1099 309 265 0 0 chr13 67421774 67421872 -52862440 - MurSatRep1 Unknown Unknown -1409 728 631 6 1099 615 263 35 92 chr13 67421928 67422471 -52861841 + RLTR11B LTR ERVK 1 506 -21 6 1099 633 250 0 8 chr13 67422744 67422877 -52861435 + B3 SINE B2 1 132 -84 6 1099 1456 260 60 10 chr13 67422911 67423002 -52861310 - MTC LTR MaLR 0 421 326 6 1099 819 0 0 0 chr13 67423002 67423093 -52861219 + (CACAG)n Simple_repeat Simple_repeat 4 94 0 6 1099 1456 260 60 10 chr13 67423093 67423386 -52860926 - MTC LTR MaLR -96 325 18 6 1099 458 94 0 0 chr13 67423749 67423813 -52860499 - L1_Mus4 LINE L1 -428 6208 6145 6 1099 2747 92 41 2 chr13 67423813 67424227 -52860085 + L1_Mus4 LINE L1 6199 6628 -8 6 1099 1797 252 105 24 chr13 67426018 67427233 -52857079 + L1_Rod LINE L1 933 2245 -3602 6 1099 751 299 30 25 chr13 67427241 67427680 -52856632 - L1_Rod LINE L1 -2479 3368 2928 6 1099 1158 49 7 0 chr13 67427720 67427863 -52856449 + B1_Mm SINE Alu 1 144 -3 6 1099 243 0 0 0 chr13 67427863 67427890 -52856422 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 6 1099 7321 206 45 105 chr13 67428083 67428936 -52855376 + Lx5 LINE L1 3618 4450 -1430 6 1099 1135 78 0 0 chr13 67428936 67429077 -52855235 + B1_Mus1 SINE Alu 2 142 -6 6 1099 7321 206 45 105 chr13 67429077 67429203 -52855109 + Lx5 LINE L1 4451 4451 -1429 6 1099 1620 0 0 0 chr13 67429203 67429383 -52854929 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 6 1099 7321 215 76 71 chr13 67429383 67431520 -52852792 + Lx5 LINE L1 4451 6654 -396 6 1099 255 170 0 0 chr13 67431618 67431665 -52852647 + GA-rich Low_complexity Low_complexity 65 111 0 6 1099 385 309 24 24 chr13 67432145 67432271 -52852041 - ID_B1 SINE B4 -5 219 94 6 1099 228 35 0 0 chr13 67432690 67432719 -52851593 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1099 1476 98 18 4 chr13 67434530 67434756 -52849556 + ORR1A2 LTR MaLR 91 319 -8 6 1099 8386 168 62 17 chr13 67434793 67436508 -52847804 + ORR1A2-int LTR MaLR 1 1792 0 6 1099 2076 131 19 6 chr13 67436508 67436831 -52847481 + ORR1A2 LTR MaLR 1 327 0 6 1099 1348 207 82 24 chr13 67436840 67436949 -52847363 - ORR1B1-int LTR MaLR -1613 350 241 6 1099 432 0 0 0 chr13 67436949 67436997 -52847315 + (TC)n Simple_repeat Simple_repeat 1 48 0 6 1099 261 0 0 0 chr13 67436997 67437025 -52847287 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1099 1348 207 82 24 chr13 67437025 67437245 -52847067 - ORR1B1-int LTR MaLR -1723 240 2 6 1099 1510 214 36 55 chr13 67437245 67437606 -52846706 - ORR1B1 LTR MaLR 0 394 41 6 1099 2054 235 27 38 chr13 67437675 67438385 -52845927 + L1_Mur2 LINE L1 2121 2828 -3049 6 1099 1950 144 36 30 chr13 67438385 67438749 -52845563 - RLTR9A LTR ERVK 0 368 3 6 1099 2054 235 27 38 chr13 67438749 67438776 -52845536 + L1_Mur2 LINE L1 2829 2850 -3027 6 1099 681 13 0 0 chr13 67438809 67438887 -52845425 + (TTTC)n Simple_repeat Simple_repeat 1 78 0 6 1099 775 51 0 0 chr13 67438887 67438985 -52845327 - B1_Mm SINE Alu -12 135 38 6 1099 312 103 51 17 chr13 67438933 67438992 -52845320 - 4.5SRNA scRNA scRNA -8 86 26 6 1099 1783 230 45 42 chr13 67438994 67439070 -52845242 + L1_Mur2 LINE L1 3557 3621 -2259 6 1099 1142 58 0 0 chr13 67439070 67439209 -52845103 + B1_Mus2 SINE Alu 1 139 -8 6 1099 279 0 0 0 chr13 67439209 67439240 -52845072 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1099 1783 230 45 42 chr13 67439240 67439784 -52844528 + L1_Mur2 LINE L1 3622 4179 -1701 6 1099 590 229 24 6 chr13 67439787 67439954 -52844358 + L1_Mur2 LINE L1 4303 4472 -1408 6 1099 485 307 62 106 chr13 67439999 67440422 -52843890 - RLTR12B LTR ERVK -108 420 17 6 1099 2544 249 70 13 chr13 67440514 67441390 -52842922 - MYSERV-int LTR ERVK -299 6251 5326 6 1099 331 346 40 55 chr13 67441390 67441589 -52842723 - RMER4A LTR ERVK -12 454 259 6 1099 1369 205 35 54 chr13 67441653 67441968 -52842344 - ORR1C1 LTR MaLR -69 309 1 6 1099 523 342 61 9 chr13 67441968 67442198 -52842114 - MTE2a LTR MaLR -102 277 36 6 1099 749 296 57 22 chr13 67442441 67442756 -52841556 - MTE-int LTR MaLR -12 1568 1243 6 1099 292 242 50 50 chr13 67443129 67443268 -52841044 - MMSAT4 Satellite Satellite 0 168 30 6 1099 316 247 41 73 chr13 67443620 67443773 -52840539 - MMSAT4 Satellite Satellite -1 148 1 6 1099 604 24 0 47 chr13 67443773 67443859 -52840453 + L1Md_F2 LINE L1 6501 6582 0 6 1099 324 268 32 67 chr13 67443859 67444016 -52840296 - MMSAT4 Satellite Satellite -61 151 1 6 1099 392 263 67 67 chr13 67444059 67444532 -52839780 - MMSAT4 Satellite Satellite -5 473 1 6 1099 2068 225 39 19 chr13 67445140 67445625 -52838687 + RLTR12B LTR ERVK 1 495 -33 6 1099 1719 221 0 22 chr13 67445806 67446167 -52838145 + Lx4A LINE L1 6706 7058 0 6 1099 42 36 0 0 chr13 67446167 67446223 -52838089 + AT_rich Low_complexity Low_complexity 1 56 0 6 1099 3001 77 64 0 chr13 67446493 67446869 -52837443 - MTB LTR MaLR 0 400 1 6 1099 7544 98 6 76 chr13 67446871 67448049 -52836263 - MTB-int LTR MaLR -2 1096 1 6 1099 2963 88 61 0 chr13 67448049 67448426 -52835886 - MTB LTR MaLR 0 400 1 6 1099 264 326 22 22 chr13 67448772 67448910 -52835402 - MurSatRep1 Unknown Unknown -1392 745 608 6 1099 252 253 19 194 chr13 67448950 67449166 -52835146 + RLTR11B LTR ERVK 1 178 -275 6 1099 885 271 124 28 chr13 67449105 67449428 -52834884 - MTC LTR MaLR -67 354 1 6 1099 1193 232 65 42 chr13 67451147 67451696 -52832616 + L1_Rod LINE L1 925 1482 -4365 6 1099 1540 213 85 47 chr13 67451747 67451907 -52832405 + RLTR20A LTR ERVK 31 188 -353 6 1099 600 14 0 0 chr13 67451907 67451976 -52832336 + (GA)n Simple_repeat Simple_repeat 1 69 0 6 1099 1540 213 85 47 chr13 67451976 67452217 -52832095 + RLTR20A LTR ERVK 189 438 -103 6 1099 180 0 0 0 chr13 67452217 67452237 -52832075 + (TG)n Simple_repeat Simple_repeat 2 21 0 6 1099 1540 213 85 47 chr13 67452237 67452258 -52832054 + RLTR20A LTR ERVK 439 468 -73 6 1099 405 228 24 8 chr13 67452281 67452405 -52831907 + L1_Rod LINE L1 1541 1666 -4181 6 1099 851 216 22 13 chr13 67452423 67452648 -52831664 + L1_Rod LINE L1 1747 1973 -3874 6 1099 1356 47 0 0 chr13 67452648 67452808 -52831504 + B2_Mm1t SINE B2 1 160 -33 6 1099 564 29 0 0 chr13 67452808 67452878 -52831434 + (TAAA)n Simple_repeat Simple_repeat 3 72 0 6 1099 719 258 67 0 chr13 67452888 67453128 -52831184 + L1_Rod LINE L1 1978 2233 -3614 6 1099 731 290 43 34 chr13 67453141 67453580 -52830732 - L1_Rod LINE L1 -2472 3375 2933 6 1099 233 297 58 19 chr13 67453600 67453703 -52830609 + L1_Rod LINE L1 3417 3523 -2324 6 1099 239 29 0 54 chr13 67453726 67453763 -52830549 + (TATG)n Simple_repeat Simple_repeat 2 36 0 6 1099 233 183 155 24 chr13 67453842 67453926 -52830386 + Lx5 LINE L1 3615 3709 -2168 6 1099 3131 162 14 30 chr13 67453905 67454546 -52829766 + Lx5 LINE L1 3817 4447 -1430 6 1099 308 102 0 78 chr13 67454549 67454613 -52829699 + B1_Mus1 SINE Alu 2 60 -88 6 1099 330 282 0 0 chr13 67454618 67454788 -52829524 + GA-rich Low_complexity Low_complexity 3 172 0 6 1099 508 259 11 28 chr13 67454811 67455393 -52828919 + GA-rich Low_complexity Low_complexity 1 572 0 6 1099 411 278 7 10 chr13 67455412 67456130 -52828182 + GA-rich Low_complexity Low_complexity 1 715 0 6 1099 284 169 82 27 chr13 67456137 67456210 -52828102 + RLTR25B LTR ERVK 432 508 -520 6 1099 710 111 0 9 chr13 67456145 67456254 -52828058 + B1_Mus2 SINE Alu 40 147 0 6 1099 387 125 31 0 chr13 67456255 67456319 -52827993 + Lx5 LINE L1 4442 4507 -1370 6 1099 2207 89 28 9 chr13 67456319 67456638 -52827674 + IAPLTR2b LTR ERVK 1 325 -2 6 1099 7425 166 53 12 chr13 67456640 67458727 -52825585 + Lx5 LINE L1 4502 6654 -396 6 1099 423 0 0 0 chr13 67459884 67459931 -52824381 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1099 1629 266 85 6 chr13 67459948 67460443 -52823869 + RMER5 LTR ERV1 1 534 0 6 1099 2535 146 44 57 chr13 67462735 67463194 -52821118 + RLTR11B LTR ERVK 1 453 0 6 1099 307 351 90 0 chr13 67463860 67463994 -52820318 + B1_Mus2 SINE Alu 2 147 0 6 1099 1334 180 78 32 chr13 67464201 67464370 -52819942 - ORR1B1 LTR MaLR -77 317 154 6 1099 564 15 0 0 chr13 67464370 67464435 -52819877 + (CA)n Simple_repeat Simple_repeat 2 66 0 6 1099 1334 180 78 32 chr13 67464435 67464546 -52819766 - ORR1B1 LTR MaLR -241 153 24 6 1099 589 229 34 30 chr13 67464552 67464717 -52819595 - ORR1B1-int LTR MaLR -36 1544 1224 6 1099 1556 227 20 29 chr13 67464696 67465041 -52819271 - ORR1B1-int LTR MaLR -427 1536 1195 6 1099 586 309 22 14 chr13 67465041 67465264 -52819048 - Lx8 LINE L1 -809 6664 6440 6 1099 1179 261 17 60 chr13 67465867 67466270 -52818042 - RLTR42-int LTR ERVK -3012 2510 2125 6 1099 300 316 126 6 chr13 67466873 67467048 -52817264 - RMER5 LTR ERV1 -155 379 184 6 1099 267 266 56 56 chr13 67467348 67467564 -52816748 - MMSAT4 Satellite Satellite -6 216 1 6 1099 441 303 4 4 chr13 67467594 67467815 -52816497 - MMSAT4 Satellite Satellite 0 221 1 6 1099 256 340 61 64 chr13 67467706 67467986 -52816326 - MurSatRep1 Unknown Unknown -122 2015 1737 6 1099 354 239 21 21 chr13 67467924 67468063 -52816249 - MMSAT4 Satellite Satellite -78 139 1 6 1099 429 244 30 30 chr13 67468099 67468230 -52816082 - MMSAT4 Satellite Satellite -1 167 37 6 1099 572 232 35 28 chr13 67468985 67469127 -52815185 - B1_Mur3 SINE Alu -5 144 2 6 1099 715 281 15 0 chr13 67470037 67470236 -52814076 + RLTR42-int LTR ERVK 1199 1400 -4122 6 1099 29 47 0 0 chr13 67470869 67470912 -52813400 + AT_rich Low_complexity Low_complexity 1 43 0 6 1099 863 207 133 0 chr13 67471430 67471618 -52812694 - B3 SINE B2 -3 213 1 6 1099 2254 231 62 47 chr13 67471800 67472527 -52811785 + RLTR42-int LTR ERVK 2125 2862 -2660 6 1099 333 229 20 20 chr13 67473697 67473795 -52810517 - MurSatRep1 Unknown Unknown -1409 728 631 6 1099 347 299 55 101 chr13 67473866 67474104 -52810208 - Lx9 LINE L1 -465 7179 6953 6 1099 927 303 63 28 chr13 67474228 67474656 -52809656 - Lx9 LINE L1 -662 6982 6540 6 1099 1698 300 76 30 chr13 67477301 67478115 -52806197 - Lx9 LINE L1 -263 7381 6530 6 1099 662 139 57 0 chr13 67478483 67478605 -52805707 + URR1B DNA MER1_type 89 217 -8 6 1099 6891 81 27 38 chr13 67478713 67479653 -52804659 + RLTR13B3 LTR ERVK 1 929 0 6 1099 26 0 0 0 chr13 67480420 67480446 -52803866 + AT_rich Low_complexity Low_complexity 1 26 0 7 1099 1258 55 0 0 chr13 67481262 67481408 -52802904 + B1_Mm SINE Alu 2 147 0 7 1099 884 107 0 0 chr13 67481903 67482025 -52802287 - B1_Mus1 SINE Alu 0 148 27 7 1099 538 289 51 27 chr13 67482025 67482122 -52802190 - ID_B1 SINE B4 0 224 53 7 1099 4007 76 38 6 chr13 67483474 67483977 -52800335 + MURVY-LTR LTR ERV1 1 519 0 7 1099 5167 263 49 66 chr13 67483977 67484576 -52799736 + MuRRS4-int LTR ERV1 3 601 -4462 7 1099 1524 55 11 21 chr13 67484576 67484763 -52799549 + B2_Mm2 SINE B2 2 186 -9 7 1099 5167 273 50 62 chr13 67484763 67486855 -52797457 + MuRRS4-int LTR ERV1 602 2815 -4741 7 1099 1692 183 31 80 chr13 67487170 67487638 -52796674 + RMER17C LTR ERVK 16 439 -519 7 1099 1066 327 88 40 chr13 67487673 67488431 -52795881 - Lx8 LINE L1 -239 7234 6440 7 1099 1058 263 25 59 chr13 67489050 67489454 -52794858 - RLTR42-int LTR ERVK -3012 2510 2121 7 1099 1015 218 97 48 chr13 67490348 67490637 -52793675 - RLTR31A_Mm LTR ERVK -71 513 211 7 1099 255 267 55 59 chr13 67490794 67491011 -52793301 - MMSAT4 Satellite Satellite -6 216 1 7 1099 415 289 31 31 chr13 67491125 67491515 -52792797 - MMSAT4 Satellite Satellite 0 390 1 7 1099 239 303 0 13 chr13 67491608 67491685 -52792627 - MurSatRep1 Unknown Unknown -325 1812 1737 7 1099 371 228 21 21 chr13 67491623 67491762 -52792550 - MMSAT4 Satellite Satellite -78 139 1 7 1099 421 244 30 30 chr13 67491798 67491929 -52792383 - MMSAT4 Satellite Satellite -1 167 37 7 1099 542 237 21 49 chr13 67492684 67492826 -52791486 - B1_Mus1 SINE Alu -5 143 6 7 1099 671 291 15 0 chr13 67493762 67493961 -52790351 + RLTR42-int LTR ERVK 1199 1400 -4122 7 1099 23 33 0 0 chr13 67494593 67494623 -52789689 + AT_rich Low_complexity Low_complexity 1 30 0 7 1099 693 232 151 0 chr13 67495134 67495319 -52788993 - B3 SINE B2 -3 213 1 7 1099 2327 222 62 45 chr13 67495501 67496227 -52788085 + RLTR42-int LTR ERVK 2125 2862 -2660 7 1099 1306 41 0 0 chr13 67496454 67496600 -52787712 - B1_Mus2 SINE Alu 0 147 2 7 1099 305 271 0 0 chr13 67497576 67497661 -52786651 - MurSatRep1 Unknown Unknown -1409 728 644 7 1099 274 284 50 92 chr13 67497745 67497865 -52786447 - Lx9 LINE L1 -465 7179 7065 7 1099 824 315 64 28 chr13 67498069 67498491 -52785821 - Lx9 LINE L1 -662 6982 6546 7 1099 399 311 74 14 chr13 67501321 67501536 -52782776 + RLTR42-int LTR ERVK 1173 1400 -4122 1 137 333 282 42 10 chr13 67502011 67502177 -52782135 + Lx7 LINE L1 5614 5789 -502 2 1100 243 0 0 0 chr13 67502177 67502204 -52782108 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 1100 237 345 48 18 chr13 67502204 67502314 -52781998 + Lx7 LINE L1 5735 5847 0 2 1100 2720 172 38 10 chr13 67502385 67502889 -52781423 + RLTR12B LTR ERVK 1 518 -10 4 1100 1612 62 0 10 chr13 67503508 67503702 -52780610 + B2_Mm1a SINE B2 2 193 0 5 1100 495 16 16 0 chr13 67503814 67503878 -52780434 - B1_Mm SINE Alu 0 147 83 6 1100 658 268 87 10 chr13 67503905 67504112 -52780200 + LTRIS4 LTR ERV1 283 505 -2 7 1100 1515 184 69 47 chr13 67504557 67504917 -52779395 + RLTR9A LTR ERVK 1 368 0 8 1100 2159 160 94 42 chr13 67505224 67505700 -52778612 + RLTR12B LTR ERVK 1 501 -27 9 1100 731 218 76 76 chr13 67506038 67506276 -52778036 - RLTR42-int LTR ERVK -2707 2815 2578 1 1100 239 292 0 0 chr13 67506277 67506349 -52777963 + (CATA)n Simple_repeat Simple_repeat 1 72 0 1 1100 1170 235 54 61 chr13 67506368 67506776 -52777536 - RLTR42-int LTR ERVK -2997 2525 2121 1 1100 523 315 42 70 chr13 67507309 67507516 -52776796 - RMER5 LTR ERV1 -72 462 268 1 1100 1181 79 0 0 chr13 67507516 67507656 -52776656 - B1_Mus1 SINE Alu -8 140 1 1 1100 523 315 42 70 chr13 67507656 67507735 -52776577 - RMER5 LTR ERV1 -267 267 184 1 1100 1711 207 108 13 chr13 67507845 67507973 -52776339 - MTC LTR MaLR -4 417 286 1 1100 1243 68 0 0 chr13 67507973 67508119 -52776193 + B1_Mus2 SINE Alu 2 147 0 1 1100 1711 207 108 13 chr13 67508119 67508371 -52775941 - MTC LTR MaLR -136 285 2 1 1100 1943 114 42 19 chr13 67508499 67508811 -52775501 - ORR1A2 LTR MaLR -8 319 1 1 1100 268 284 47 47 chr13 67508891 67509020 -52775292 - MMSAT4 Satellite Satellite 0 168 40 1 1100 331 276 42 33 chr13 67509143 67509448 -52774864 - MMSAT4 Satellite Satellite 0 307 1 1 1100 400 224 46 46 chr13 67509476 67509607 -52774705 - MMSAT4 Satellite Satellite -1 167 37 1 1100 633 243 28 0 chr13 67510333 67510477 -52773835 - B1_Mur3 SINE Alu 0 149 2 1 1100 1214 134 5 16 chr13 67510490 67510680 -52773632 - B2_Mm2 SINE B2 -7 188 1 2 1100 1018 266 38 20 chr13 67512697 67513042 -52771270 + RLTR42-int LTR ERVK 1050 1400 -4122 2 1100 1113 97 7 0 chr13 67514394 67514538 -52769774 - B1_Mus2 SINE Alu -1 146 2 2 1100 320 281 16 16 chr13 67514780 67514903 -52769409 - MurSatRep1 Unknown Unknown -1409 728 606 2 1100 1574 219 96 8 chr13 67514976 67515353 -52768959 + MTD LTR MaLR 3 412 -7 2 1100 2762 116 15 10 chr13 67516596 67516997 -52767315 - RLTR9D LTR ERVK 0 403 1 2 1100 231 326 81 7 chr13 67517238 67517386 -52766926 - L1MA6 LINE L1 -337 5963 5805 2 1100 1795 21 0 0 chr13 67517412 67517603 -52766709 + B2_Mm1t SINE B2 2 192 -1 2 1100 618 309 30 7 chr13 67517632 67517935 -52766377 - Lx9 LINE L1 -25 7619 7310 2 1100 1766 282 57 39 chr13 67517979 67518613 -52765699 - Lx9 LINE L1 -470 7174 6530 2 1100 324 130 290 0 chr13 67518980 67519080 -52765232 + URR1B DNA MER1_type 89 217 -8 2 1100 26 0 0 0 chr13 67519950 67519976 -52764336 + AT_rich Low_complexity Low_complexity 1 26 0 3 1100 658 359 17 10 chr13 67523168 67523576 -52760736 - Lx8 LINE L1 -259 7214 6804 3 1100 1448 85 0 5 chr13 67523578 67523778 -52760534 + RLTR9E LTR ERVK 1 199 -210 3 1100 447 293 89 0 chr13 67523796 67523953 -52760359 - Lx8 LINE L1 -803 6670 6500 3 1100 534 16 0 0 chr13 67525098 67525161 -52759151 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1100 432 271 173 32 chr13 67525405 67525646 -52758666 - RMER5 LTR ERV1 -72 462 187 3 1100 1410 67 44 11 chr13 67525646 67525826 -52758486 + B2_Mm2 SINE B2 2 187 -8 3 1100 432 271 173 32 chr13 67525826 67525862 -52758450 - RMER5 LTR ERV1 -348 186 147 3 1100 291 342 8 8 chr13 67526579 67526700 -52757612 - MurSatRep1 Unknown Unknown -120 2017 1897 3 1100 3091 93 7 12 chr13 67526748 67527171 -52757141 + BGLII LTR ERVK 1 421 0 3 1100 599 164 10 0 chr13 67528477 67528581 -52755731 + URR1B DNA MER1_type 121 225 0 3 1100 1060 210 72 34 chr13 67528771 67528953 -52755359 + RLTR42-int LTR ERVK 2125 2317 -3205 3 1100 519 17 0 0 chr13 67528953 67529013 -52755299 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 1100 1060 210 72 34 chr13 67529013 67529150 -52755162 + RLTR42-int LTR ERVK 2318 2455 -3067 3 1100 553 292 128 54 chr13 67529205 67529541 -52754771 + RLTR9A LTR ERVK 8 368 0 4 1100 386 210 76 48 chr13 67529601 67529706 -52754606 + RLTR42-int LTR ERVK 2533 2640 -2882 3 1100 2940 201 62 56 chr13 67530400 67530983 -52753329 + L1_Mur2 LINE L1 892 1425 -4452 4 1100 1178 83 0 0 chr13 67530983 67531128 -52753184 + B1_Mm SINE Alu 1 145 -2 4 1100 2940 183 70 60 chr13 67531128 67531154 -52753158 + L1_Mur2 LINE L1 1426 1431 -4446 4 1100 1058 23 8 0 chr13 67531154 67531283 -52753029 + (GAAA)n Simple_repeat Simple_repeat 2 131 0 4 1100 2940 183 70 60 chr13 67531283 67531841 -52752471 + L1_Mur2 LINE L1 1432 2006 -3871 4 1100 1382 7 0 0 chr13 67532005 67532152 -52752160 + B1_Mm SINE Alu 1 147 0 4 1100 308 295 16 16 chr13 67532842 67532966 -52751346 - MurSatRep1 Unknown Unknown -1409 728 605 4 1100 1058 81 7 33 chr13 67533067 67533220 -52751092 - B2_Mm1t SINE B2 -43 150 2 4 1100 1307 68 11 6 chr13 67533371 67533548 -52750764 - RMER16 LTR ERVK 0 533 356 4 1100 263 326 107 80 chr13 67533654 67533678 -52750634 + B4 SINE B4 60 213 -79 4 1100 626 182 40 0 chr13 67533678 67533804 -52750508 + B1_Mur4 SINE Alu 7 137 -13 5 1100 486 33 0 0 chr13 67533804 67533864 -52750448 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 5 1100 331 204 112 0 chr13 67534002 67534101 -52750211 + PB1D9 SINE Alu 7 114 -6 5 1100 1226 81 0 0 chr13 67534200 67534348 -52749964 - B1_Mus1 SINE Alu 0 148 1 5 1100 746 276 43 47 chr13 67534676 67534934 -52749378 - LTRIS4 LTR ERV1 0 507 251 5 1100 207 0 0 0 chr13 67534950 67534973 -52749339 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1100 440 185 109 0 chr13 67535409 67535501 -52748811 + U6 snRNA snRNA 1 102 -5 5 1100 2256 119 0 25 chr13 67535505 67535866 -52748446 + L1_Mur2 LINE L1 4794 5145 -732 5 1100 3369 229 60 10 chr13 67535861 67536688 -52747624 + Lx2B LINE L1 6132 7000 0 5 1100 492 99 0 0 chr13 67536688 67536759 -52747553 + (GAA)n Simple_repeat Simple_repeat 1 71 0 5 1100 257 146 62 0 chr13 67536831 67536879 -52747433 - RLTR11A LTR ERVK -470 58 8 6 1100 211 211 0 0 chr13 67536880 67536918 -52747394 + (AAATG)n Simple_repeat Simple_repeat 3 40 0 6 1100 23 0 0 0 chr13 67537598 67537621 -52746691 + AT_rich Low_complexity Low_complexity 1 23 0 6 1100 340 319 69 59 chr13 67537624 67537827 -52746485 - MTE-int LTR MaLR -244 1336 1132 6 1100 228 350 30 0 chr13 67537977 67538077 -52746235 - MTE-int LTR MaLR -706 874 772 6 1100 453 252 37 22 chr13 67538100 67538234 -52746078 - MTE-int LTR MaLR -896 684 549 6 1100 1074 210 37 18 chr13 67538267 67538539 -52745773 + ORR1D1 LTR MaLR 5 281 -93 6 1100 299 335 50 73 chr13 67538638 67538899 -52745413 - RMER15 LTR ERVL -42 533 279 6 1100 284 242 0 0 chr13 67539384 67539450 -52744862 + MER57A-int LTR ERV1 1100 1165 -5022 6 1100 432 0 0 0 chr13 67539463 67539511 -52744801 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1100 28 0 0 0 chr13 67539513 67539541 -52744771 + AT_rich Low_complexity Low_complexity 1 28 0 6 1100 188 35 35 0 chr13 67539753 67539782 -52744530 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1100 1208 44 0 0 chr13 67539782 67539919 -52744393 - B1_Mus1 SINE Alu -10 138 2 7 1100 751 355 117 18 chr13 67540315 67541134 -52743178 - Lx8 LINE L1 -113 7360 6461 7 1100 3566 144 134 0 chr13 67541321 67541919 -52742393 - RLTR33 LTR ERVK 0 678 1 7 1100 378 310 122 5 chr13 67542509 67542713 -52741599 - RMER5 LTR ERV1 -72 462 235 7 1100 387 270 10 15 chr13 67543218 67543365 -52740947 - MMSAT4 Satellite Satellite -75 146 1 7 1100 272 343 63 67 chr13 67543253 67543537 -52740775 - MurSatRep1 Unknown Unknown -120 2017 1735 7 1100 340 260 51 51 chr13 67543479 67543617 -52740695 - MMSAT4 Satellite Satellite 0 168 31 7 1100 504 245 44 44 chr13 67543647 67544041 -52740271 - MMSAT4 Satellite Satellite 0 394 1 7 1100 292 290 30 30 chr13 67544067 67544202 -52740110 - MMSAT4 Satellite Satellite 0 168 34 7 1100 774 40 0 0 chr13 67544562 67544661 -52739651 - MT-int LTR MaLR -685 413 315 7 1100 2535 65 65 39 chr13 67544773 67545109 -52739203 + MTA_Mm LTR MaLR 1 345 -1 7 1100 3903 102 47 22 chr13 67545112 67546053 -52738259 + MTA_Mm-int LTR MaLR 1 1098 0 7 1100 3334 61 5 2 chr13 67546053 67546447 -52737865 + MTA_Mm LTR MaLR 1 395 -1 7 1100 2152 176 73 14 chr13 67546701 67547196 -52737116 + MYSERV16_I-int LTR ERVK 1786 2309 -17 7 1100 183 100 0 0 chr13 67547196 67547226 -52737086 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 8 1100 554 273 71 28 chr13 67547261 67547472 -52736840 + RLTR16 LTR ERVK 32 251 -254 7 1100 5883 193 60 23 chr13 67547816 67549196 -52735116 + L1_Mur3 LINE L1 2064 3494 -2386 8 1100 1068 116 7 0 chr13 67549223 67549369 -52734943 + B1_Mus1 SINE Alu 2 148 0 8 1100 219 69 0 0 chr13 67549369 67549398 -52734914 + (GAAAA)n Simple_repeat Simple_repeat 3 31 0 8 1100 262 267 32 32 chr13 67550296 67550420 -52733892 - MurSatRep1 Unknown Unknown -1409 728 605 8 1100 234 184 0 0 chr13 67551564 67551613 -52732699 + A-rich Low_complexity Low_complexity 1 49 0 8 1100 357 122 40 0 chr13 67551763 67551837 -52732475 + CT-rich Low_complexity Low_complexity 2 78 0 8 1100 1215 61 7 0 chr13 67551850 67551997 -52732315 - B1_Mus1 SINE Alu 0 148 1 8 1100 567 165 57 16 chr13 67553064 67553187 -52731125 + B1_Mur1 SINE Alu 21 148 -1 8 1100 365 243 107 0 chr13 67553375 67553478 -52730834 + PB1D9 SINE Alu 2 115 -5 8 1100 2854 140 30 8 chr13 67553541 67554046 -52730266 + L1_Mur2 LINE L1 154 669 -6043 9 1100 633 240 62 22 chr13 67554051 67554230 -52730082 + RLTR20A LTR ERVK 21 206 -371 9 1100 1283 105 0 95 chr13 67554232 67554432 -52729880 + B2_Mm2 SINE B2 1 181 -14 9 1100 8092 85 30 1 chr13 67554432 67556177 -52728135 - L1_Mus3 LINE L1 -9 6629 4820 9 1100 213 121 0 0 chr13 67556193 67556226 -52728086 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 9 1100 358 86 356 10 chr13 67556358 67556462 -52727850 - B2_Mm2 SINE B2 -4 191 52 9 1100 1074 84 0 7 chr13 67556460 67556604 -52727708 - B2_Mm2 SINE B2 -48 147 5 9 1100 812 217 13 100 chr13 67556608 67556838 -52727474 + RLTR20A LTR ERVK 332 541 0 9 1100 19774 101 65 128 chr13 67556838 67557932 -52726380 + Lx4A LINE L1 1039 2154 -3723 9 1100 1405 70 32 0 chr13 67557932 67558118 -52726194 + B2_Mm2 SINE B2 1 192 -3 9 1100 19774 104 72 170 chr13 67558118 67559156 -52725156 + Lx4A LINE L1 2155 3382 -2495 9 1100 2704 33 48 0 chr13 67559156 67559486 -52724826 - ORR1A1 LTR MaLR 0 346 1 9 1100 19774 104 72 170 chr13 67559486 67559546 -52724766 + Lx4A LINE L1 3383 3407 -2470 9 1100 1085 90 14 0 chr13 67559546 67559691 -52724621 - B1_Mm SINE Alu 0 147 1 1 1100 19774 105 72 157 chr13 67559691 67563079 -52721233 + Lx4A LINE L1 3408 6149 -909 9 1100 1405 115 54 31 chr13 67563081 67563341 -52720971 + BGLII_Mus LTR ERVK 157 422 0 1 1100 489 110 0 0 chr13 67563723 67563796 -52720516 + (CA)n Simple_repeat Simple_repeat 2 74 0 1 1100 248 320 46 46 chr13 67563834 67563965 -52720347 - MTE-int LTR MaLR -15 1565 1435 1 1100 463 304 31 49 chr13 67563982 67564207 -52720105 - MTE-int LTR MaLR -228 1352 1132 1 1100 258 340 30 0 chr13 67564359 67564459 -52719853 - MTE-int LTR MaLR -706 874 772 1 1100 463 274 88 19 chr13 67564482 67564642 -52719670 - MTE-int LTR MaLR -896 684 514 1 1100 884 214 136 13 chr13 67564649 67564936 -52719376 + ORR1D1 LTR MaLR 5 326 -44 1 1100 2558 104 23 10 chr13 67564958 67565346 -52718966 - RLTR31A_Mm LTR ERVK -191 393 1 1 1100 212 29 86 0 chr13 67565866 67565901 -52718411 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1 1100 19318 64 1 1 chr13 67565944 67568573 -52715739 + L1Md_F2 LINE L1 2958 5586 -297 1 1100 7487 62 29 5 chr13 67568573 67569546 -52714766 + L1Md_F2 LINE L1 5587 6582 0 1 1100 240 35 0 0 chr13 67569717 67569746 -52714566 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1100 519 95 0 0 chr13 67569759 67569833 -52714479 + (CCTA)n Simple_repeat Simple_repeat 2 75 0 1 1100 277 309 50 118 chr13 67569968 67570206 -52714106 - RLTR41 LTR ERV1 -26 420 199 1 1100 201 74 0 0 chr13 67571200 67571227 -52713085 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1100 1711 16 0 0 chr13 67571227 67571419 -52712893 - B2_Mm1a SINE B2 0 193 2 1 1100 503 353 109 23 chr13 67571512 67572156 -52712156 - Lx8 LINE L1 -253 7220 6522 1 1100 3368 144 121 2 chr13 67572408 67573011 -52711301 - RLTR33 LTR ERVK -3 675 1 1 1100 306 73 0 0 chr13 67573209 67573250 -52711062 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1 1100 361 294 156 10 chr13 67573505 67573704 -52710608 - RMER5 LTR ERV1 -72 462 235 1 1100 1163 88 0 0 chr13 67573961 67574108 -52710204 - B1_Mus2 SINE Alu 0 147 1 1 1100 1223 48 0 0 chr13 67574246 67574393 -52709919 + B1_Mm SINE Alu 1 147 0 1 1100 350 257 14 14 chr13 67574844 67574982 -52709330 - MMSAT4 Satellite Satellite 0 168 31 1 1100 284 252 51 51 chr13 67575096 67575234 -52709078 - MMSAT4 Satellite Satellite 0 168 31 1 1100 432 242 33 33 chr13 67575348 67575658 -52708654 - MMSAT4 Satellite Satellite 0 310 1 1 1100 264 271 44 44 chr13 67575684 67575819 -52708493 - MMSAT4 Satellite Satellite 0 168 34 1 1100 813 269 108 47 chr13 67576537 67576931 -52707381 + RMER13A LTR ERVK 164 591 -317 1 1100 656 132 35 0 chr13 67576951 67577065 -52707247 + URR1B DNA MER1_type 107 224 -1 1 1100 1479 223 60 112 chr13 67577275 67577319 -52706993 + RLTR42-int LTR ERVK 2125 2168 -3354 1 1100 1323 92 0 30 chr13 67577319 67577520 -52706792 + B2_Mm2 SINE B2 1 195 0 1 1100 1479 223 60 112 chr13 67577520 67577795 -52706517 + RLTR42-int LTR ERVK 2169 2424 -3098 1 1100 3557 20 0 0 chr13 67577795 67578191 -52706121 - MTA_Mm LTR MaLR 0 396 1 1 1100 1479 223 60 112 chr13 67578191 67578502 -52705810 + RLTR42-int LTR ERVK 2425 2723 -2799 1 1100 26 50 0 0 chr13 67578715 67578755 -52705557 + AT_rich Low_complexity Low_complexity 1 40 0 1 1100 8193 188 72 28 chr13 67579135 67580305 -52704007 + L1_Mur2 LINE L1 894 2053 -3824 1 1100 387 0 0 0 chr13 67580305 67580348 -52703964 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1100 8193 178 78 27 chr13 67580348 67580896 -52703416 + L1_Mur2 LINE L1 2054 2596 -3281 1 1100 326 23 23 0 chr13 67580896 67580939 -52703373 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1100 8193 178 78 27 chr13 67580939 67581481 -52702831 + L1_Mur2 LINE L1 2597 3221 -2656 1 1100 516 16 0 0 chr13 67581481 67581542 -52702770 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1100 8193 178 78 27 chr13 67581542 67581831 -52702481 + L1_Mur2 LINE L1 3222 3492 -2385 1 1100 180 0 0 0 chr13 67582033 67582053 -52702259 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1 1100 274 250 20 20 chr13 67582665 67582763 -52701549 - MurSatRep1 Unknown Unknown -1409 728 631 1 1100 1258 20 0 0 chr13 67583931 67584078 -52700234 + B1_Mm SINE Alu 1 147 0 1 1100 192 77 0 0 chr13 67584078 67584104 -52700208 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1100 839 62 0 0 chr13 67585978 67586090 -52698222 - B1_Mm SINE Alu 0 147 36 1 1100 1876 194 83 10 chr13 67586193 67586604 -52697708 + BGLII_B LTR ERVK 1 441 0 1 1100 1129 75 14 0 chr13 67587104 67587250 -52697062 + B1_Mus1 SINE Alu 1 148 0 1 1100 603 0 0 0 chr13 67587254 67587321 -52696991 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1100 1869 181 71 82 chr13 67587545 67588081 -52696231 + RLTR31A_Mm LTR ERVK 1 530 -54 1 1100 1099 296 121 15 chr13 67588231 67588694 -52695618 - MT2A LTR ERVL -10 523 12 1 1100 1040 278 33 71 chr13 67588998 67589362 -52694950 - MTE2b LTR MaLR -1 378 29 1 1100 1050 95 7 0 chr13 67589437 67589574 -52694738 + B1_Mm SINE Alu 1 138 -9 1 1100 207 0 0 0 chr13 67589591 67589614 -52694698 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1100 500 323 44 31 chr13 67589645 67589805 -52694507 - RSINE1 SINE B4 -2 163 2 1 1100 1054 294 75 35 chr13 67589811 67590301 -52694011 - MTE-int LTR MaLR -33 1547 1038 1 1100 385 254 109 15 chr13 67591086 67591312 -52693000 - MTD LTR MaLR -37 382 107 1 1100 269 135 19 0 chr13 67591329 67591381 -52692931 + A-rich Low_complexity Low_complexity 3 55 0 1 1100 379 260 11 11 chr13 67591881 67592025 -52692287 - MMSAT4 Satellite Satellite -78 144 1 1 1100 393 258 40 40 chr13 67592211 67593021 -52691291 - MMSAT4 Satellite Satellite 0 810 1 1 1100 846 183 0 0 chr13 67593323 67593458 -52690854 + B1_Mur4 SINE Alu 3 137 -13 1 1100 195 42 0 0 chr13 67593458 67593482 -52690830 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1100 1439 68 5 5 chr13 67594382 67594573 -52689739 + B2_Mm1t SINE B2 2 192 -1 1 1100 1648 230 88 16 chr13 67595739 67596124 -52688188 + MTD LTR MaLR 7 419 0 1 1100 240 35 0 0 chr13 67596584 67596613 -52687699 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1100 3294 126 30 122 chr13 67596615 67597346 -52686966 + RMER6A LTR ERVK 93 756 0 1 1100 265 274 10 21 chr13 67597555 67597652 -52686660 - L1MA8 LINE L1 -318 5973 5878 1 1100 24 0 0 0 chr13 67597706 67597730 -52686582 + AT_rich Low_complexity Low_complexity 1 24 0 1 1100 2154 58 7 20 chr13 67599565 67599863 -52684449 - MTA_Mm LTR MaLR 0 396 103 1 1100 864 70 0 9 chr13 67600045 67600161 -52684151 - MTA_Mm LTR MaLR -281 115 1 1 1100 2227 72 0 3 chr13 67602146 67602453 -52681859 + L1_Mus2 LINE L1 6040 6345 -221 1 1100 3236 48 8 2 chr13 67602702 67603100 -52681212 + MTB LTR MaLR 1 400 0 1 1100 276 214 34 54 chr13 67603451 67603557 -52680755 - MTD LTR MaLR 0 379 269 1 1100 1176 205 191 12 chr13 67603570 67603916 -52680396 + MTD LTR MaLR 12 419 0 1 1100 949 286 57 10 chr13 67603916 67604210 -52680102 - MTD LTR MaLR -97 322 15 1 1100 597 320 78 39 chr13 67604546 67604629 -52679683 + MTE2b LTR MaLR 100 179 -200 1 1100 1443 216 62 11 chr13 67604629 67604985 -52679327 + ORR1D1 LTR MaLR 1 374 0 1 1100 597 320 78 39 chr13 67604985 67605158 -52679154 + MTE2b LTR MaLR 180 366 -13 1 1100 541 213 139 134 chr13 67605268 67605353 -52678959 - B3 SINE B2 -14 202 133 1 1100 749 172 12 52 chr13 67605353 67605525 -52678787 + Lx3C LINE L1 6811 6975 -1 1 1100 541 213 139 134 chr13 67605525 67605640 -52678672 - B3 SINE B2 -84 132 1 1 1100 237 176 13 39 chr13 67605925 67606002 -52678310 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 1 1100 335 300 81 36 chr13 67606190 67606522 -52677790 + L1M3 LINE L1 4227 4573 -1567 1 1100 443 200 30 50 chr13 67607440 67607540 -52676772 + B3 SINE B2 6 103 -113 1 1100 449 352 35 0 chr13 67607771 67607916 -52676396 + RSINE1 SINE B4 12 161 -4 1 1100 345 392 15 0 chr13 67607998 67608128 -52676184 + ID_B1 SINE B4 91 222 -2 1 1100 1934 132 52 55 chr13 67608258 67608642 -52675670 - RLTR9A2 LTR ERVK 0 383 1 1 1100 1035 241 51 79 chr13 67608654 67608952 -52675360 + MTD LTR MaLR 1 290 -129 1 1100 1174 74 0 0 chr13 67608952 67609100 -52675212 - B1_Mus1 SINE Alu 0 148 1 1 1100 1035 241 51 79 chr13 67609100 67609117 -52675195 + MTD LTR MaLR 291 307 -112 1 1100 1069 249 65 9 chr13 67609110 67609435 -52674877 + MTD-int LTR MaLR 914 1256 -2 1 1100 958 271 29 8 chr13 67609437 67609683 -52674629 + MTD LTR MaLR 1 251 -168 1 1100 380 211 33 0 chr13 67609695 67609785 -52674527 + L1_Rod LINE L1 5606 5698 -149 1 1100 404 258 72 8 chr13 67610199 67610324 -52673988 + B1_Mur1 SINE Alu 2 134 -15 1 1100 946 251 163 37 chr13 67611600 67612035 -52672277 - Lx9 LINE L1 0 7644 7155 1 1100 228 241 17 0 chr13 67612065 67612123 -52672189 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1100 1465 262 111 12 chr13 67612163 67612758 -52671554 + RMER15-int LTR ERVL 1 654 -4345 1 1100 1966 294 29 39 chr13 67612810 67613602 -52670710 + RMER15-int LTR ERVL 764 1547 -3452 1 1100 463 312 182 48 chr13 67613658 67614203 -52670109 + L1M2 LINE L1 2633 3250 -2893 1 1100 225 312 0 36 chr13 67614205 67614288 -52670024 + GA-rich Low_complexity Low_complexity 3 82 0 1 1100 549 314 83 53 chr13 67614309 67614600 -52669712 + L1M2 LINE L1 3368 3668 -2475 1 1100 270 0 0 0 chr13 67614600 67614630 -52669682 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1100 549 314 83 53 chr13 67614630 67615330 -52668982 + L1M2 LINE L1 3669 4388 -1755 1 1100 361 169 0 24 chr13 67615348 67615433 -52668879 + GA-rich Low_complexity Low_complexity 3 85 0 1 1100 280 117 65 32 chr13 67615476 67615538 -52668774 - B1F1 SINE Alu 0 149 86 1 1100 339 291 77 75 chr13 67615568 67616089 -52668223 + L1M2 LINE L1 4454 5004 -1139 1 1100 21 0 0 0 chr13 67616089 67616110 -52668202 + AT_rich Low_complexity Low_complexity 1 21 0 1 1100 815 169 35 14 chr13 67616120 67616264 -52668048 + B1_Mus1 SINE Alu 2 148 0 1 1100 327 25 0 0 chr13 67616401 67616441 -52667871 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1100 655 300 37 74 chr13 67616574 67616672 -52667640 - MTE2a LTR MaLR -1 378 282 1 1100 1214 250 91 9 chr13 67616672 67617011 -52667301 - ORR1D2 LTR MaLR -2 368 2 1 1100 655 300 37 74 chr13 67617011 67617211 -52667101 - MTE2a LTR MaLR -98 281 91 1 1100 280 253 46 42 chr13 67617589 67617810 -52666502 - MMSAT4 Satellite Satellite 0 221 1 1 1100 241 278 55 55 chr13 67618005 67618208 -52666104 - MMSAT4 Satellite Satellite 0 203 1 1 1100 313 256 53 53 chr13 67618346 67618647 -52665665 - MMSAT4 Satellite Satellite -5 301 1 1 1100 285 276 0 13 chr13 67618656 67618733 -52665579 - MurSatRep1 Unknown Unknown -325 1812 1737 1 1100 327 289 18 18 chr13 67618761 67618980 -52665332 - MMSAT4 Satellite Satellite 0 219 1 1 1100 1089 265 101 6 chr13 67619411 67619737 -52664575 - ORR1D2 LTR MaLR -3 367 11 1 1100 33 20 0 20 chr13 67620159 67620180 -52664132 + AT_rich Low_complexity Low_complexity 1 21 0 1 1100 4328 93 6 42 chr13 67620180 67620843 -52663469 + Lx3A LINE L1 6333 6971 -10 1 1100 33 20 0 20 chr13 67620843 67620872 -52663440 + AT_rich Low_complexity Low_complexity 1 29 0 2 1100 265 250 32 32 chr13 67622139 67622263 -52662049 - MurSatRep1 Unknown Unknown -1409 728 605 1 1100 247 362 24 24 chr13 67622601 67622765 -52661547 - MER5A1 DNA MER1_type -2 164 1 2 1100 1871 178 41 19 chr13 67622896 67623314 -52660998 + RLTR11A LTR ERVK 1 528 0 2 1100 207 0 0 0 chr13 67624606 67624629 -52659683 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 2 1100 189 74 0 0 chr13 67624664 67624691 -52659621 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1100 349 355 16 0 chr13 67625384 67625505 -52658807 - ID_B1 SINE B4 -8 216 94 2 1100 577 200 57 32 chr13 67628081 67628205 -52656107 - B1_Mus1 SINE Alu -17 131 5 2 1100 353 278 86 53 chr13 67628089 67628241 -52656071 - B4 SINE B4 -87 205 49 2 1100 545 325 46 46 chr13 67628663 67628882 -52655430 - MTE2b-int LTR MaLR -850 730 512 2 1100 1369 191 115 17 chr13 67629187 67629529 -52654783 + RLTR20A2 LTR ERVK 1 377 -201 2 1100 2639 175 137 12 chr13 67629529 67630097 -52654215 + RLTR26 LTR ERVK 4 642 0 2 1100 641 191 121 11 chr13 67630099 67630289 -52654023 + RLTR20A1 LTR ERVK 336 546 -5 2 1100 1049 315 38 20 chr13 67630294 67630754 -52653558 - MTE2b-int LTR MaLR -1089 491 1 2 1100 428 300 33 99 chr13 67630756 67630893 -52653419 - MTE2b LTR MaLR -2 377 248 2 1100 1129 122 38 27 chr13 67630893 67631079 -52653233 + B2_Mm2 SINE B2 1 188 -7 2 1100 428 300 33 99 chr13 67631079 67631152 -52653160 - MTE2b LTR MaLR -132 247 181 2 1100 450 217 82 9 chr13 67631199 67631323 -52652989 - MTD LTR MaLR -14 405 246 2 1100 236 298 18 0 chr13 67631379 67631436 -52652876 + ORR1B1 LTR MaLR 16 73 -306 2 1100 624 108 189 0 chr13 67631425 67631536 -52652776 + ORR1B1 LTR MaLR 260 391 -3 2 1100 285 29 0 0 chr13 67632331 67632365 -52651947 + (GA)n Simple_repeat Simple_repeat 2 35 0 2 1100 289 250 40 40 chr13 67632443 67632568 -52651744 + RLTR15 LTR ERVK 221 345 -14 2 1100 261 0 0 0 chr13 67632838 67632867 -52651445 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1101 1058 292 67 42 chr13 67634657 67635394 -52648918 - L1_Mur3 LINE L1 -3922 1958 1204 2 1101 1230 173 190 75 chr13 67635562 67635894 -52648418 - ORR1C2 LTR MaLR 0 384 15 2 1101 198 0 0 0 chr13 67637027 67637049 -52647263 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1101 1111 56 28 0 chr13 67637049 67637192 -52647120 - B1_Mus1 SINE Alu 0 148 2 2 1101 653 315 32 14 chr13 67637198 67637475 -52646837 - Lx8 LINE L1 -387 7086 6805 2 1101 339 302 86 45 chr13 67637506 67637728 -52646584 + RLTR16 LTR ERVK 32 262 -243 2 1101 1230 106 11 0 chr13 67638801 67638980 -52645332 + B2_Mm1t SINE B2 1 181 -12 2 1101 288 200 300 7 chr13 67638998 67639138 -52645174 + B2_Mm2 SINE B2 1 181 -14 2 1101 304 197 0 29 chr13 67639554 67639622 -52644690 - RMER5 LTR ERV1 -8 526 461 2 1101 392 261 44 7 chr13 67639642 67639777 -52644535 - RMER15 LTR ERVL -27 548 409 2 1101 282 315 111 26 chr13 67639814 67640003 -52644309 - RMER5 LTR ERV1 -74 460 256 2 1101 1120 252 109 22 chr13 67640125 67640437 -52643875 - MTD LTR MaLR 0 419 81 2 1101 345 261 38 38 chr13 67641635 67642104 -52642208 - MMSAT4 Satellite Satellite -5 469 1 2 1101 287 274 43 43 chr13 67642218 67642524 -52641788 - MMSAT4 Satellite Satellite 0 306 1 2 1101 355 254 49 49 chr13 67642554 67643112 -52641200 - MMSAT4 Satellite Satellite 0 558 1 2 1101 1421 84 5 0 chr13 67644157 67644348 -52639964 - B2_Mm1a SINE B2 -1 192 1 2 1101 1138 71 0 0 chr13 67644412 67644552 -52639760 + B1_Mus2 SINE Alu 1 140 -7 2 1101 1175 114 11 0 chr13 67644586 67644762 -52639550 + B2_Mm1t SINE B2 2 179 -14 2 1101 474 68 371 19 chr13 67644826 67644931 -52639381 + B2_Mm2 SINE B2 47 188 -7 2 1101 279 176 43 76 chr13 67645234 67645326 -52638986 + GA-rich Low_complexity Low_complexity 1 89 0 2 1101 1034 52 22 0 chr13 67646504 67646640 -52637672 - B1_Mm SINE Alu 0 147 9 2 1101 580 217 70 0 chr13 67646838 67646967 -52637345 + B1_Mus2 SINE Alu 1 138 -9 2 1101 2319 192 68 36 chr13 67647020 67647518 -52636794 + RLTR11A LTR ERVK 15 528 0 2 1101 262 287 16 16 chr13 67647571 67647695 -52636617 - MurSatRep1 Unknown Unknown -1409 728 605 2 1101 682 221 57 7 chr13 67648247 67648388 -52635924 + B1_Mur2 SINE Alu 2 149 0 2 1101 378 304 121 33 chr13 67648417 67648723 -52635589 - L1MA6 LINE L1 -202 6098 5766 2 1101 1537 252 27 88 chr13 67649397 67649940 -52634372 + RLTR20C LTR ERVK 33 550 -27 2 1101 1128 72 0 0 chr13 67650381 67650519 -52633793 + B1_Mm SINE Alu 1 138 -9 2 1101 206 0 69 0 chr13 67650519 67650548 -52633764 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1101 200 227 0 0 chr13 67650724 67650768 -52633544 + A-rich Low_complexity Low_complexity 1 44 0 2 1101 220 378 0 0 chr13 67650874 67650948 -52633364 + PB1D10 SINE Alu 18 91 -26 2 1101 497 231 174 0 chr13 67651558 67651679 -52632633 - B1_Mur2 SINE Alu -5 144 3 2 1101 198 0 0 0 chr13 67655047 67655069 -52629243 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1101 1180 61 0 0 chr13 67655088 67655235 -52629077 + B1_Mus1 SINE Alu 2 148 0 2 1101 513 115 0 0 chr13 67655235 67655313 -52628999 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 2 1101 1066 118 23 29 chr13 67655384 67655558 -52628754 + B2_Mm2 SINE B2 3 175 -20 2 1101 408 118 29 0 chr13 67655968 67656036 -52628276 - MTB LTR MaLR 0 407 338 2 1101 754 130 0 0 chr13 67656023 67656138 -52628174 + ORR1A3-int LTR MaLR 1302 1416 -547 2 1101 2419 51 42 0 chr13 67656135 67656448 -52627864 - MTB LTR MaLR -74 326 1 2 1101 265 299 91 20 chr13 67656476 67656575 -52627737 - ID_B1 SINE B4 -1 223 118 2 1101 7591 83 18 1 chr13 67657610 67659146 -52625166 - L1_Mus3 LINE L1 -7 6631 5060 2 1101 1925 97 0 0 chr13 67659143 67659412 -52624900 - L1_Mm LINE L1 -215 5668 5400 2 1101 2025 103 45 63 chr13 67659438 67659769 -52624543 - ORR1A3 LTR MaLR 0 326 2 2 1101 1920 174 28 6 chr13 67659954 67660313 -52623999 + ORR1B2 LTR MaLR 1 367 0 2 1101 249 228 0 17 chr13 67660317 67660375 -52623937 - RMER5 LTR ERV1 -21 513 457 2 1101 477 0 0 0 chr13 67660400 67660453 -52623859 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1101 467 311 96 67 chr13 67660596 67660910 -52623402 - RMER5 LTR ERV1 -72 462 140 2 1101 723 223 152 0 chr13 67661677 67661861 -52622451 + B3 SINE B2 2 213 -3 2 1101 32 0 0 0 chr13 67662133 67662165 -52622147 + AT_rich Low_complexity Low_complexity 1 32 0 2 1101 264 59 0 0 chr13 67662320 67662354 -52621958 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1101 1224 26 0 7 chr13 67662357 67662510 -52621802 - B2_Mm2 SINE B2 -43 152 1 2 1101 21 36 0 0 chr13 67662574 67662602 -52621710 + AT_rich Low_complexity Low_complexity 1 28 0 2 1101 787 65 202 8 chr13 67662604 67662728 -52621584 - B1_Mus1 SINE Alu 0 148 1 2 1101 5003 40 2 2 chr13 67662815 67663424 -52620888 - L1Md_F2 LINE L1 0 6582 5974 2 1101 3350 12 5 0 chr13 67663427 67663830 -52620482 + L1Md_F2 LINE L1 5587 5991 -591 2 1101 1381 84 11 0 chr13 67663830 67664020 -52620292 - B2_Mm1t SINE B2 -1 192 1 2 1101 1829 192 33 141 chr13 67664038 67664207 -52620105 - RLTR16 LTR ERVK -18 487 324 2 1101 758 114 0 29 chr13 67664207 67664343 -52619969 + Lx LINE L1 6519 6650 -4 2 1101 1829 192 33 141 chr13 67664343 67664719 -52619593 - RLTR16 LTR ERVK -182 323 1 2 1101 228 100 0 0 chr13 67664854 67664884 -52619428 - URR1B DNA MER1_type 0 225 196 2 1101 875 43 26 0 chr13 67665716 67665831 -52618481 - B1_Mus1 SINE Alu -4 144 27 2 1101 1743 217 113 62 chr13 67666296 67666862 -52617450 - RMER19B LTR ERVK 0 902 308 2 1101 526 100 22 22 chr13 67667135 67667252 -52617060 + B1_Mus2 SINE Alu 1 117 -3 2 1101 381 324 28 60 chr13 67667308 67667525 -52616787 + B3 SINE B2 4 213 -3 2 1101 402 202 113 68 chr13 67667559 67667692 -52616620 + B1_Mus2 SINE Alu 11 150 0 2 1101 666 95 0 0 chr13 67668192 67668287 -52616025 + (TCTG)n Simple_repeat Simple_repeat 2 96 0 2 1101 327 288 67 15 chr13 67668567 67668701 -52615611 - MTD LTR MaLR -5 414 274 2 1101 575 348 18 5 chr13 67668862 67669084 -52615228 - MTD LTR MaLR -194 225 1 2 1101 1486 242 40 50 chr13 67669589 67670397 -52613915 + L1_Mur3 LINE L1 889 1679 -4201 2 1101 713 207 70 116 chr13 67670408 67670473 -52613839 + L1_Mur3 LINE L1 2127 2197 -3680 2 1101 280 0 0 48 chr13 67670473 67670515 -52613797 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1101 713 207 70 116 chr13 67670515 67670750 -52613562 + L1_Mur3 LINE L1 2198 2413 -3464 2 1101 2558 77 11 11 chr13 67670753 67671106 -52613206 + RMER16 LTR ERVK 128 480 -53 2 1101 549 0 0 0 chr13 67671116 67671177 -52613135 + (TTTA)n Simple_repeat Simple_repeat 3 63 0 2 1101 1114 90 6 31 chr13 67671177 67671338 -52612974 - B2_Mm2 SINE B2 -38 157 1 2 1101 504 61 0 0 chr13 67671372 67671438 -52612874 + RMER16 LTR ERVK 468 533 0 2 1101 4600 51 2 14 chr13 67671548 67671754 -52612558 - LTRIS_Mus LTR ERV1 0 587 387 2 1101 4189 29 12 0 chr13 67671754 67672241 -52612071 + MT2_Mm LTR ERVL 1 493 0 2 1101 4600 51 2 14 chr13 67672241 67672628 -52611684 - LTRIS_Mus LTR ERV1 -201 386 1 2 1101 642 250 0 0 chr13 67672861 67672993 -52611319 + B3 SINE B2 1 132 -84 2 1101 2220 203 2 14 chr13 67673033 67673452 -52610860 - MTC LTR MaLR -7 414 1 2 1101 7360 119 6 16 chr13 67673695 67673871 -52610441 + RLTR21 LTR ERVK 1 177 -1395 2 1101 2397 131 12 24 chr13 67673871 67674285 -52610027 + RLTR9E LTR ERVK 1 409 0 2 1101 7360 119 6 16 chr13 67674285 67674696 -52609616 + RLTR21 LTR ERVK 178 581 -991 2 1101 3993 46 0 32 chr13 67674696 67675194 -52609118 - LTRIS_Mm LTR ERV1 0 482 1 2 1101 7360 119 6 16 chr13 67675194 67675743 -52608569 + RLTR21 LTR ERVK 582 1127 -445 2 1101 1366 152 17 9 chr13 67675944 67676177 -52608135 + ORR1A4 LTR MaLR 5 239 -90 2 1101 1920 259 133 19 chr13 67676674 67677666 -52606646 + L1_Rod LINE L1 1138 2233 -3614 2 1101 585 282 52 68 chr13 67677676 67677975 -52606337 - L1_Rod LINE L1 -2472 3375 3088 2 1101 1053 99 0 0 chr13 67677975 67678127 -52606185 + (TTCC)n Simple_repeat Simple_repeat 3 154 0 2 1101 1569 27 0 11 chr13 67678127 67678312 -52606000 - B2_Mm1t SINE B2 -9 184 2 2 1101 1104 8 0 0 chr13 67678312 67678437 -52605875 + (TTTC)n Simple_repeat Simple_repeat 2 126 0 2 1101 1320 91 17 0 chr13 67678439 67678615 -52605697 - B2_Mm2 SINE B2 -15 180 2 2 1101 585 282 52 68 chr13 67678615 67678767 -52605545 - L1_Rod LINE L1 -2760 3087 2929 2 1101 293 258 106 40 chr13 67678801 67679027 -52605285 + L1_Rod LINE L1 3417 3657 -2190 2 1101 1425 180 26 151 chr13 67679214 67679705 -52604607 - RLTR23 LTR ERV1 0 430 1 2 1101 2258 104 0 60 chr13 67679866 67680214 -52604098 + ORR1A2 LTR MaLR 1 327 0 2 1101 202 194 0 0 chr13 67681017 67681053 -52603259 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1101 262 299 54 27 chr13 67681540 67681713 -52602599 - RLTR12A LTR ERVK -341 187 8 3 1101 3578 212 52 65 chr13 67681720 67682718 -52601594 - MYSERV6-int LTR ERVK 0 8959 7968 3 1101 5315 51 6 1 chr13 67682718 67683382 -52600930 - L1Md_F2 LINE L1 0 6582 5916 3 1101 3578 212 52 65 chr13 67683382 67683502 -52600810 - MYSERV6-int LTR ERVK -992 7967 7856 3 1101 434 285 12 56 chr13 67683547 67683749 -52600563 - RMER4A LTR ERVK -30 555 251 3 1101 10094 141 77 1 chr13 67683795 67684248 -52600064 + L1_Mur2 LINE L1 3017 3471 -2406 3 1101 258 32 0 0 chr13 67684248 67684279 -52600033 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1101 10094 141 77 1 chr13 67684279 67684447 -52599865 + L1_Mur2 LINE L1 3472 3645 -2232 3 1101 591 15 0 0 chr13 67684447 67684515 -52599797 + (GAAA)n Simple_repeat Simple_repeat 2 69 0 3 1101 10094 141 77 1 chr13 67684515 67685833 -52598479 + L1_Mur2 LINE L1 3646 5102 -775 3 1101 3880 151 45 28 chr13 67686002 67686753 -52597559 - RMER12 LTR ERVK -549 773 10 3 1101 2450 192 47 11 chr13 67686755 67687288 -52597024 + MYSERV6-int LTR ERVK 8168 8719 -240 3 1101 219 45 43 22 chr13 67687602 67687648 -52596664 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 3 1101 1202 149 25 12 chr13 67687648 67687892 -52596420 + MYSERV6-int LTR ERVK 8712 8958 -1 3 1101 717 193 190 38 chr13 67687892 67688239 -52596073 + RMER6B LTR ERVK 1 451 -10 3 1101 546 242 141 0 chr13 67688233 67688382 -52595930 - ORR1B1 LTR MaLR -208 186 17 3 1101 539 311 76 1 chr13 67688478 67688764 -52595548 + Lx6 LINE L1 6990 7259 -201 3 1101 489 295 77 57 chr13 67689035 67689618 -52594694 + L1M3 LINE L1 3846 4440 -1700 3 1101 198 0 0 0 chr13 67689618 67689640 -52594672 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1101 1208 55 0 0 chr13 67689652 67689798 -52594514 + B1_Mm SINE Alu 2 147 0 3 1101 339 261 80 0 chr13 67690241 67690329 -52593983 - MTE2b LTR MaLR -12 367 273 3 1101 692 213 73 73 chr13 67690329 67690506 -52593806 - ORR1C2 LTR MaLR 0 384 208 3 1101 241 371 66 9 chr13 67690586 67690692 -52593620 - RSINE1 SINE B4 0 165 54 3 1101 696 274 81 22 chr13 67690748 67691020 -52593292 - MTE-int LTR MaLR -40 1540 1253 3 1101 818 132 116 29 chr13 67691843 67692015 -52592297 - B2_Mm2 SINE B2 -8 187 1 3 1101 304 340 20 25 chr13 67692073 67692275 -52592037 - MurSatRep1 Unknown Unknown -191 1946 1746 3 1101 321 279 34 34 chr13 67692145 67692362 -52591950 - MMSAT4 Satellite Satellite -1 217 1 3 1101 353 245 50 50 chr13 67692481 67693034 -52591278 - MMSAT4 Satellite Satellite -1 553 1 3 1101 336 259 51 51 chr13 67693157 67693957 -52590355 - MMSAT4 Satellite Satellite -5 800 1 3 1101 365 251 47 47 chr13 67693993 67694710 -52589602 - MMSAT4 Satellite Satellite -1 717 1 3 1101 213 200 18 18 chr13 67695255 67695311 -52589001 + (TA)n Simple_repeat Simple_repeat 2 57 0 3 1101 1638 236 55 46 chr13 67695409 67695867 -52588445 + RLTR12B LTR ERVK 59 520 -8 3 1101 5068 126 45 17 chr13 67696700 67697541 -52586771 + Lx2A1 LINE L1 6138 7002 -6 3 1101 1156 278 30 104 chr13 67697753 67698226 -52586086 + RLTR11B LTR ERVK 1 438 -15 3 1101 792 169 8 0 chr13 67698513 67698643 -52585669 + B3 SINE B2 1 131 -85 3 1101 216 0 0 0 chr13 67698905 67698929 -52585383 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1101 623 245 47 9 chr13 67699581 67699795 -52584517 + L1_Rod LINE L1 930 1151 -6457 3 1101 346 231 141 0 chr13 67699784 67699905 -52584407 + L1_Rod LINE L1 1438 1575 -4272 3 1101 724 198 50 10 chr13 67699937 67700136 -52584176 + L1_Rod LINE L1 3719 3925 -1922 3 1101 291 271 94 0 chr13 67700142 67700227 -52584085 + RLTR18B LTR ERVK 53 145 -367 3 1101 825 241 5 5 chr13 67700282 67700470 -52583842 + RLTR18B LTR ERVK 297 484 -28 3 1101 459 95 14 0 chr13 67700658 67700732 -52583580 + L1_Mur2 LINE L1 3614 3688 -2189 3 1101 776 36 2 1 chr13 67700743 67700847 -52583465 - B1_Mus2 SINE Alu 0 147 45 3 1101 245 221 98 65 chr13 67700778 67700870 -52583442 - MT2B2 LTR ERVL -320 264 170 3 1101 8689 16 1 0 chr13 67700870 67701919 -52582393 + L1Md_T LINE L1 4537 5586 -297 3 1101 8505 32 0 0 chr13 67701919 67702913 -52581399 + L1Md_T LINE L1 5587 6580 -2 3 1101 463 79 16 0 chr13 67702925 67702988 -52581324 - B1_Mus2 SINE Alu -83 64 1 3 1101 356 141 15 30 chr13 67702929 67702995 -52581317 - ID_B1 SINE B4 -83 141 77 3 1101 9911 156 38 42 chr13 67702995 67703620 -52580692 + L1_Mur2 LINE L1 3683 4283 -1594 3 1101 1078 82 7 0 chr13 67703620 67703766 -52580546 + B1_Mus1 SINE Alu 2 148 0 3 1101 9911 156 38 42 chr13 67703766 67704494 -52579818 + L1_Mur2 LINE L1 4284 4994 -883 3 1101 1284 83 27 11 chr13 67704494 67704677 -52579635 + B2_Mm2 SINE B2 3 188 -7 3 1101 9911 156 38 42 chr13 67704677 67705472 -52578840 + L1_Mur2 LINE L1 4995 5823 -54 3 1101 2534 174 159 8 chr13 67705472 67706000 -52578312 - RMER19C LTR ERVK -3 608 1 3 1101 4024 227 79 34 chr13 67706000 67707162 -52577150 + Lx5 LINE L1 5835 7049 -1 3 1101 330 245 31 31 chr13 67707992 67708089 -52576223 - ID_B1 SINE B4 -5 219 123 3 1101 1833 274 36 10 chr13 67708561 67709081 -52575231 + RMER5 LTR ERV1 1 534 0 3 1101 1284 89 0 0 chr13 67709118 67709298 -52575014 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1101 842 139 0 0 chr13 67709312 67709441 -52574871 - B2_Mm2 SINE B2 -64 131 3 3 1101 1216 48 0 0 chr13 67710807 67710954 -52573358 + B1_Mus1 SINE Alu 2 148 0 3 1101 222 62 0 0 chr13 67710954 67710986 -52573326 + (A)n Simple_repeat Simple_repeat 1 32 0 3 1101 2195 187 18 14 chr13 67712019 67712453 -52571859 + RLTR11B LTR ERVK 1 436 -17 3 1101 802 256 54 39 chr13 67712448 67712651 -52571661 - ORR1A4 LTR MaLR -49 280 75 3 1101 857 260 43 16 chr13 67712651 67712956 -52571356 - MYSERV-int LTR ERVK -926 5624 5312 3 1101 441 290 43 101 chr13 67712960 67713167 -52571145 - RMER4A LTR ERVK -32 434 240 3 1101 470 257 161 45 chr13 67713192 67713502 -52570810 - MYSERV-int LTR ERVK -672 4588 4243 3 1101 826 114 23 8 chr13 67713512 67713619 -52570693 + MTA_Mm LTR MaLR 1 109 -287 3 1101 1545 206 86 14 chr13 67713619 67713979 -52570333 - RLTR1 LTR ERV1 0 624 239 3 1101 1374 106 5 31 chr13 67714309 67714380 -52569932 - RLTR1B-int LTR ERV1 -79 3220 3151 3 1101 4914 100 82 100 chr13 67714380 67715289 -52569023 + RLTR13B1 LTR ERVK 1 893 0 3 1101 1374 106 5 31 chr13 67715289 67715441 -52568871 - RLTR1B-int LTR ERV1 -149 3150 3003 3 1101 1236 41 0 0 chr13 67715460 67715607 -52568705 - B1_Mus2 SINE Alu 0 147 1 3 1101 2158 93 15 15 chr13 67715610 67715947 -52568365 - MMVL30-int LTR ERV1 -282 3416 3080 3 1101 3229 169 31 88 chr13 67716016 67716266 -52568046 - RMER12 LTR ERVK -549 773 543 3 1101 2774 145 57 13 chr13 67716266 67716796 -52567516 + RLTR31_Mur LTR ERVK 1 553 0 3 1101 3229 169 31 88 chr13 67716796 67717016 -52567296 - RMER12 LTR ERVK -780 542 310 3 1101 1047 52 73 0 chr13 67717016 67717152 -52567160 + B1_Mus1 SINE Alu 3 148 0 3 1101 3229 169 31 88 chr13 67717152 67717451 -52566861 - RMER12 LTR ERVK -1013 309 47 3 1101 558 67 0 0 chr13 67717646 67717721 -52566591 + (TATG)n Simple_repeat Simple_repeat 1 75 0 3 1101 280 427 23 8 chr13 67717722 67717854 -52566458 - RSINE1 SINE B4 -27 138 5 3 1101 1272 238 39 50 chr13 67717927 67718264 -52566048 - ORR1C1 LTR MaLR -45 333 1 3 1101 655 328 77 15 chr13 67718264 67718524 -52565788 - MTE2a LTR MaLR -102 277 2 3 1101 528 59 0 0 chr13 67718595 67718663 -52565649 + (TATG)n Simple_repeat Simple_repeat 1 68 0 3 1101 261 424 15 8 chr13 67718664 67718797 -52565515 - RSINE1 SINE B4 -27 138 5 3 1101 738 308 88 8 chr13 67718814 67719151 -52565161 - ORR1C1-int LTR MaLR -43 1537 1163 3 1101 341 249 43 40 chr13 67719388 67719610 -52564702 - MMSAT4 Satellite Satellite 0 222 1 3 1101 756 178 26 62 chr13 67719994 67720186 -52564126 - B2_Mm2 SINE B2 -10 185 1 3 1101 375 254 54 54 chr13 67720231 67721877 -52562435 - MMSAT4 Satellite Satellite 0 1646 1 3 1101 479 240 48 48 chr13 67721926 67722725 -52561587 - MMSAT4 Satellite Satellite -15 799 1 3 1101 215 102 67 17 chr13 67723184 67723244 -52561068 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1101 1678 253 14 64 chr13 67723318 67723803 -52560509 + RLTR12B LTR ERVK 3 463 -65 3 1101 1826 16 0 0 chr13 67723805 67723997 -52560315 + B2_Mm1a SINE B2 1 192 -1 3 1101 292 269 0 13 chr13 67724022 67724101 -52560211 + RLTR12B LTR ERVK 445 522 -6 3 1101 23 33 0 0 chr13 67724120 67724150 -52560162 + AT_rich Low_complexity Low_complexity 1 30 0 3 1101 317 229 20 20 chr13 67724982 67725080 -52559232 - MurSatRep1 Unknown Unknown -1409 728 631 3 1101 261 0 0 0 chr13 67725119 67725148 -52559164 + (TA)n Simple_repeat Simple_repeat 1 29 0 3 1101 713 263 33 66 chr13 67725159 67725460 -52558852 + RLTR11B LTR ERVK 1 291 -162 3 1101 592 249 24 43 chr13 67725487 67725687 -52558625 + RLTR11B LTR ERVK 257 501 -27 3 1101 782 169 8 0 chr13 67725959 67726089 -52558223 + B3 SINE B2 1 131 -85 3 1101 613 230 64 20 chr13 67726979 67727183 -52557129 + L1_Rod LINE L1 930 1142 -6466 3 1101 386 217 131 16 chr13 67727181 67727303 -52557009 + L1_Rod LINE L1 1440 1575 -4272 3 1101 543 171 40 16 chr13 67727324 67727449 -52556863 + L1_Rod LINE L1 3709 3836 -2011 3 1101 275 271 94 0 chr13 67727595 67727680 -52556632 + RLTR18B LTR ERVK 53 145 -367 3 1101 684 273 0 37 chr13 67727739 67727885 -52556427 + RLTR18B LTR ERVK 302 444 -68 3 1101 3164 45 76 0 chr13 67727885 67728267 -52556045 + IAPLTR2a LTR ERVK 1 411 0 3 1101 684 273 0 37 chr13 67728267 67728310 -52556002 + RLTR18B LTR ERVK 445 484 -28 3 1101 3636 158 18 11 chr13 67728498 67729092 -52555220 + L1_Mur2 LINE L1 3614 4212 -1665 3 1101 198 71 0 0 chr13 67729092 67729120 -52555192 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1101 3636 158 18 11 chr13 67729120 67729179 -52555133 + L1_Mur2 LINE L1 4213 4271 -1606 3 1101 2475 109 0 0 chr13 67729179 67729490 -52554822 + RLTR10E LTR ERVK 1 311 0 3 1101 670 55 22 0 chr13 67729491 67729582 -52554730 + MMERVK10C-int LTR ERVK 2 94 -7487 3 1101 590 282 6 0 chr13 67729577 67729733 -52554579 + MMERVK10C-int LTR ERVK 271 427 -7154 3 1101 516 216 66 25 chr13 67729727 67729944 -52554368 + MMERVK10C-int LTR ERVK 660 887 -6694 3 1101 896 57 16 63 chr13 67729944 67730133 -52554179 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 3 1101 516 216 66 25 chr13 67730133 67730157 -52554155 + MMERVK10C-int LTR ERVK 888 911 -6670 3 1101 556 150 189 2 chr13 67730145 67730270 -52554042 + IAP-d-int LTR ERVK 55 177 -6365 3 1101 770 176 34 7 chr13 67730268 67730417 -52553895 + IAP-d-int LTR ERVK 351 503 -6039 3 1101 1609 103 103 0 chr13 67730417 67730650 -52553662 + IAP-d-int LTR ERVK 5007 5263 -1279 3 1101 1706 207 14 6 chr13 67730649 67731008 -52553304 + IAPEY3-int LTR ERVK 7046 7407 -273 3 1101 2613 84 0 0 chr13 67731096 67731407 -52552905 + RLTR10E LTR ERVK 1 311 0 3 1101 1219 76 7 0 chr13 67731450 67731595 -52552717 + B1_Mus2 SINE Alu 2 147 0 3 1101 8250 157 36 29 chr13 67731595 67732339 -52551973 + L1_Mur2 LINE L1 4274 4994 -883 3 1101 1361 87 27 11 chr13 67732339 67732526 -52551786 + B2_Mm2 SINE B2 3 192 -3 3 1101 8250 157 36 29 chr13 67732526 67732764 -52551548 + L1_Mur2 LINE L1 4995 5232 -645 3 1101 261 0 0 0 chr13 67732764 67732793 -52551519 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 1101 8250 157 36 29 chr13 67732793 67733343 -52550969 + L1_Mur2 LINE L1 5233 5818 -59 3 1101 2465 170 157 22 chr13 67733347 67733526 -52550786 - RMER19C LTR ERVK -3 608 436 3 1101 3267 59 20 8 chr13 67733526 67733917 -52550395 + MTA_Mm LTR MaLR 1 396 0 3 1101 2465 170 157 22 chr13 67733917 67734273 -52550039 - RMER19C LTR ERVK -176 435 1 3 1101 4427 227 79 31 chr13 67734273 67735433 -52548879 + Lx5 LINE L1 5835 7050 0 3 1101 339 280 27 27 chr13 67736265 67736375 -52547937 - ID_B1 SINE B4 -6 218 109 3 1101 1793 252 52 17 chr13 67736850 67737366 -52546946 + RMER5 LTR ERV1 1 534 0 3 1101 894 168 69 0 chr13 67737432 67737605 -52546707 - B2_Mm2 SINE B2 -9 186 2 3 1101 2259 155 18 62 chr13 67739942 67740396 -52543916 + RLTR11B LTR ERVK 1 434 -19 3 1101 1031 255 42 68 chr13 67740393 67740746 -52543566 - ORR1B1 LTR MaLR -48 346 3 3 1101 316 87 43 0 chr13 67740807 67740853 -52543459 - MTB_Mm LTR MaLR -356 51 4 3 1101 610 126 11 45 chr13 67740855 67740980 -52543332 + MTA_Mm LTR MaLR 262 396 0 4 1101 1305 127 9 0 chr13 67740982 67741195 -52543117 + MTA_Mm-int LTR MaLR 3 217 -881 4 1101 1707 64 0 0 chr13 67741215 67741434 -52542878 + MTB LTR MaLR 182 400 0 4 1101 2720 233 70 26 chr13 67741450 67742224 -52542088 - MYSERV6-int LTR ERVK -5292 3667 2860 4 1101 1332 190 17 53 chr13 67742224 67742524 -52541788 - RMER6B LTR ERVK 0 461 173 4 1101 3105 61 203 9 chr13 67742527 67742956 -52541356 + RLTR1B LTR ERV1 1 512 0 4 1101 67865 19 0 0 chr13 67742956 67750511 -52533801 + MMERGLN-int LTR ERV1 1 7556 0 4 1101 1657 86 58 11 chr13 67750511 67750876 -52533436 + RLTR1B LTR ERV1 1 449 -63 4 1101 4597 0 2 0 chr13 67750904 67751381 -52532931 - L1Md_A LINE L1 0 6582 6105 4 1101 2969 9 0 0 chr13 67751381 67751706 -52532606 + L1_Mm LINE L1 4804 5128 -755 4 1101 520 111 0 12 chr13 67751706 67751788 -52532524 + RLTR1B LTR ERV1 432 512 0 4 1101 886 155 6 29 chr13 67751792 67751965 -52532347 - RMER6B LTR ERVK -292 169 1 4 1101 620 164 40 16 chr13 67751969 67752093 -52532219 - MYSERV6-int LTR ERVK -1191 7768 7642 4 1101 180 0 0 0 chr13 67752094 67752114 -52532198 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1101 1215 63 0 0 chr13 67752117 67752260 -52532052 - B1_Mus2 SINE Alu -4 143 1 4 1101 1364 151 0 5 chr13 67752260 67752479 -52531833 - MYSERV6-int LTR ERVK -1303 7656 7439 4 1101 3014 49 16 92 chr13 67752509 67752934 -52531378 + MTA_Mm LTR MaLR 4 396 0 4 1101 680 35 0 0 chr13 67752934 67753020 -52531292 + MTA_Mm-int LTR MaLR 1 86 -1012 4 1101 2843 179 110 37 chr13 67753021 67753977 -52530335 - RLTR13D1 LTR ERVK 0 1023 13 4 1101 7317 57 28 3 chr13 67753969 67754961 -52529351 + MTA_Mm-int LTR MaLR 82 1098 0 4 1101 3507 51 2 5 chr13 67754961 67755358 -52528954 + MTA_Mm LTR MaLR 1 396 0 4 1101 1378 180 4 54 chr13 67755358 67755634 -52528678 - MYSERV6-int LTR ERVK -1550 7409 7148 4 1101 2071 215 7 35 chr13 67755635 67756089 -52528223 - BGLII_B LTR ERVK 0 441 1 4 1101 8160 168 66 28 chr13 67756090 67757073 -52527239 - MYSERV16_I-int LTR ERVK -2 2324 1311 4 1101 1403 103 5 25 chr13 67757073 67757272 -52527040 - B2_Mm2 SINE B2 0 195 1 4 1101 8160 168 66 28 chr13 67757272 67757966 -52526346 - MYSERV16_I-int LTR ERVK -1016 1310 583 4 1101 489 204 8 42 chr13 67758003 67758121 -52526191 - MYSERV6-int LTR ERVK -4546 4413 4300 4 1101 260 88 0 0 chr13 67758123 67758157 -52526155 + RMER6B LTR ERVK 81 114 -347 4 1101 731 266 24 64 chr13 67758184 67758433 -52525879 + RMER6B LTR ERVK 223 461 0 4 1101 1378 203 37 24 chr13 67758433 67758731 -52525581 + MYSERV6-int LTR ERVK 1 302 -8657 4 1101 4837 113 50 12 chr13 67758732 67759510 -52524802 + RLTR13C2 LTR ERVK 1 808 0 4 1101 2107 84 55 10 chr13 67759625 67759914 -52524398 - L1_Mus1 LINE L1 0 6567 6266 4 1101 783 168 7 0 chr13 67760029 67760172 -52524140 + MYSERV6-int LTR ERVK 359 502 -8457 4 1101 4250 195 26 5 chr13 67760198 67760971 -52523341 + MERVL_2A-int LTR ERVL 4182 4970 -791 4 1101 906 206 79 92 chr13 67761002 67761306 -52523006 + L1VL4 LINE L1 470 769 -5533 4 1101 697 173 0 0 chr13 67762588 67762744 -52521568 + L1_Mur1 LINE L1 1108 1263 -5721 4 1101 370 127 0 0 chr13 67762801 67762856 -52521456 + B2_Mm2 SINE B2 47 101 -94 4 1101 25 31 0 0 chr13 67762874 67762906 -52521406 + AT_rich Low_complexity Low_complexity 1 32 0 4 1101 18069 180 48 19 chr13 67762909 67763632 -52520680 + L1_Mur1 LINE L1 1257 2060 -3817 4 1101 330 26 0 0 chr13 67763632 67763671 -52520641 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 137 18069 180 48 19 chr13 67763671 67765106 -52519206 + L1_Mur1 LINE L1 2061 3513 -2364 4 1102 183 100 0 0 chr13 67765106 67765136 -52519176 + (CCTA)n Simple_repeat Simple_repeat 2 31 0 4 1102 1309 108 43 5 chr13 67765136 67765323 -52518989 - B2_Mm2 SINE B2 0 195 2 4 1102 18069 180 48 19 chr13 67765323 67767077 -52517235 + L1_Mur1 LINE L1 3514 5285 -592 4 1102 2695 64 0 3 chr13 67767077 67767408 -52516904 + L1Md_A LINE L1 6253 6582 0 4 1102 18069 180 48 19 chr13 67767408 67767423 -52516889 + L1_Mur1 LINE L1 5286 5299 -578 4 1102 1088 174 8 59 chr13 67767527 67767775 -52516537 - RMER12 LTR ERVK -552 770 536 4 1102 1783 122 34 12 chr13 67767775 67768098 -52516214 + RLTR31_Mur LTR ERVK 1 330 -223 4 1102 423 0 0 0 chr13 67768116 67768163 -52516149 + (TATG)n Simple_repeat Simple_repeat 4 50 0 4 1102 214 358 48 32 chr13 67768171 67768295 -52516017 - RSINE1 SINE B4 -35 130 5 4 1102 693 309 97 10 chr13 67768309 67768620 -52515692 - MTE-int LTR MaLR -40 1540 1203 4 1102 366 254 56 46 chr13 67768894 67769110 -52515202 - MMSAT4 Satellite Satellite -6 218 1 4 1102 228 258 45 61 chr13 67769264 67769396 -52514916 - MMSAT4 Satellite Satellite -4 164 35 4 1102 735 213 0 45 chr13 67769522 67769699 -52514613 - B2_Mm2 SINE B2 -26 169 1 4 1102 316 282 33 26 chr13 67769744 67769963 -52514349 - MMSAT4 Satellite Satellite 0 220 1 4 1102 322 261 50 53 chr13 67770009 67770639 -52513673 - MMSAT4 Satellite Satellite -15 627 1 4 1102 450 266 46 47 chr13 67770668 67771639 -52512673 - MMSAT4 Satellite Satellite -3 970 1 4 1102 447 239 53 52 chr13 67771675 67772393 -52511919 - MMSAT4 Satellite Satellite 0 718 1 4 1102 215 100 66 16 chr13 67772943 67773004 -52511308 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 1102 1331 255 37 59 chr13 67773079 67773632 -52510680 + RLTR12A LTR ERVK 3 522 -6 4 1102 29 0 0 0 chr13 67773651 67773680 -52510632 + AT_rich Low_complexity Low_complexity 1 29 0 4 1102 297 240 20 20 chr13 67774509 67774607 -52509705 - MurSatRep1 Unknown Unknown -1409 728 631 4 1102 204 40 0 0 chr13 67774634 67774659 -52509653 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1102 630 259 41 72 chr13 67774680 67774901 -52509411 + RLTR11B LTR ERVK 3 216 -237 4 1102 258 266 12 48 chr13 67774862 67774945 -52509367 + B1_Mur4 SINE Alu 64 143 -7 4 1102 605 242 24 43 chr13 67775064 67775268 -52509044 + RLTR11B LTR ERVK 257 501 -27 4 1102 750 163 15 8 chr13 67775540 67775670 -52508642 + B3 SINE B2 1 131 -85 4 1102 633 255 47 14 chr13 67776604 67776819 -52507493 + L1_Rod LINE L1 930 1151 -6457 4 1102 367 200 148 16 chr13 67776808 67776930 -52507382 + L1_Rod LINE L1 1438 1575 -4272 4 1102 860 197 40 31 chr13 67776930 67777155 -52507157 + L1_Rod LINE L1 3699 3925 -1922 4 1102 287 271 94 0 chr13 67777161 67777246 -52507066 + RLTR18B LTR ERVK 53 145 -367 4 1102 753 257 5 5 chr13 67777301 67777489 -52506823 + RLTR18B LTR ERVK 297 484 -28 4 1102 10184 159 37 50 chr13 67777677 67777762 -52506550 + Lx5 LINE L1 3614 3676 -2201 4 1102 1195 54 0 0 chr13 67777762 67777909 -52506403 - B1_Mus2 SINE Alu 0 147 1 4 1102 10184 159 37 50 chr13 67777909 67778453 -52505859 + Lx5 LINE L1 3677 4208 -1669 4 1102 270 0 0 0 chr13 67778453 67778483 -52505829 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 4 1102 10184 159 37 50 chr13 67778483 67778566 -52505746 + Lx5 LINE L1 4209 4284 -1593 4 1102 586 214 17 0 chr13 67778566 67778683 -52505629 + PB1D9 SINE Alu 2 120 0 4 1102 10184 159 37 50 chr13 67778683 67779422 -52504890 + Lx5 LINE L1 4285 4993 -884 4 1102 1139 117 28 11 chr13 67779422 67779604 -52504708 + B2_Mm2 SINE B2 3 187 -8 4 1102 10184 159 37 50 chr13 67779604 67780390 -52503922 + Lx5 LINE L1 4994 5825 -52 4 1102 2447 172 165 22 chr13 67780391 67780566 -52503746 - RMER19C LTR ERVK -1 610 436 4 1102 2956 52 34 8 chr13 67780566 67780952 -52503360 + MTA_Mm LTR MaLR 1 396 0 4 1102 8042 64 35 1 chr13 67780952 67782014 -52502298 + MTA_Mm-int LTR MaLR 1 1098 0 4 1102 3307 46 5 0 chr13 67782014 67782408 -52501904 + MTA_Mm LTR MaLR 1 396 0 4 1102 2447 172 165 22 chr13 67782408 67782764 -52501548 - RMER19C LTR ERVK -176 435 3 4 1102 852 153 38 0 chr13 67782764 67782921 -52501391 + Lx5 LINE L1 5835 5997 -1053 4 1102 618 214 15 15 chr13 67782936 67783069 -52501243 + RMER5 LTR ERV1 394 526 -8 4 1102 563 0 0 15 chr13 67783115 67783183 -52501129 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 4 1102 872 138 0 0 chr13 67783198 67783328 -52500984 - B2_Mm2 SINE B2 -64 131 2 4 1102 14804 53 2 16 chr13 67785451 67787465 -52496847 - MMETn-int LTR ERVK -2858 1986 2 4 1102 2061 92 15 51 chr13 67787466 67787800 -52496512 - RLTRETN_Mm LTR ERVK 0 322 1 4 1102 2311 163 9 59 chr13 67788038 67788495 -52495817 + RLTR11B LTR ERVK 1 434 -19 4 1102 1101 229 44 73 chr13 67788492 67788807 -52495505 - ORR1B1 LTR MaLR -48 346 41 4 1102 1824 236 44 28 chr13 67788889 67789542 -52494770 + L1_Mur3 LINE L1 2146 2809 -3071 4 1102 207 0 0 0 chr13 67789566 67789589 -52494723 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1102 881 108 39 0 chr13 67789592 67789722 -52494590 - B1_Mus2 SINE Alu -12 135 1 4 1102 2299 213 25 35 chr13 67789778 67790257 -52494055 + L1_Mur3 LINE L1 3520 3994 -1886 4 1102 2878 64 45 18 chr13 67790257 67790653 -52493659 - MTB_Mm LTR MaLR 0 407 1 4 1102 2299 213 25 35 chr13 67790653 67790849 -52493463 + L1_Mur3 LINE L1 3995 4188 -1692 4 1102 563 237 6 17 chr13 67790843 67791015 -52493297 + L1_Mur3 LINE L1 4303 4472 -1408 4 1102 402 286 70 66 chr13 67791036 67791477 -52492835 - RLTR12B LTR ERVK -31 328 17 4 1102 1370 248 43 60 chr13 67791492 67791576 -52492736 - MYSERV-int LTR ERVK 0 6550 6473 4 1102 2803 22 3 0 chr13 67791576 67791897 -52492415 - RLTRETN_Mm LTR ERVK 0 322 1 4 1102 1899 242 48 34 chr13 67791897 67792206 -52492106 - MYSERV6-int LTR ERVK -57 8902 8583 4 1102 1189 49 0 0 chr13 67792206 67792348 -52491964 + B1_Mus1 SINE Alu 1 142 -6 4 1102 228 35 0 0 chr13 67792349 67792378 -52491934 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 4 1102 1899 242 48 34 chr13 67792378 67792653 -52491659 - MYSERV6-int LTR ERVK -377 8582 8308 4 1102 1329 248 25 2 chr13 67792650 67793050 -52491262 - MYSERV-int LTR ERVK -831 5719 5311 4 1102 504 206 19 107 chr13 67793050 67793238 -52491074 - RMER4A LTR ERVK -53 532 251 4 1102 2728 243 115 32 chr13 67793299 67793402 -52490910 - MYSERV6-int LTR ERVK -4925 4034 3919 4 1102 183 42 0 0 chr13 67793402 67793426 -52490886 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 4 1102 2728 243 115 32 chr13 67793426 67793612 -52490700 - MYSERV6-int LTR ERVK -5041 3918 3684 4 1102 2823 86 26 8 chr13 67793612 67794001 -52490311 + MTA_Mm LTR MaLR 1 396 0 4 1102 2728 243 115 32 chr13 67794001 67794795 -52489517 - MYSERV6-int LTR ERVK -5276 3683 2860 4 1102 2163 180 13 42 chr13 67794795 67795270 -52489042 - RMER6B LTR ERVK 0 461 1 4 1102 3009 167 11 27 chr13 67795280 67795902 -52488410 - MYSERV6-int LTR ERVK -1200 7759 7148 4 1102 2011 215 9 35 chr13 67795903 67796356 -52487956 - BGLII_B LTR ERVK 0 441 1 4 1102 4028 155 54 1 chr13 67796357 67797150 -52487162 - MYSERV16_I-int LTR ERVK -2 2324 1490 4 1102 2487 145 111 77 chr13 67797148 67797769 -52486543 + MuRRS-int LTR ERV1 208 1080 -3610 4 1102 717 194 59 24 chr13 67797948 67798117 -52486195 + RLTR13D1 LTR ERVK 632 806 0 4 1102 2033 74 56 3 chr13 67798228 67798514 -52485798 - L1_Mus1 LINE L1 0 6567 6267 4 1102 312 164 0 0 chr13 67798522 67798583 -52485729 + MYSERV6-int LTR ERVK 371 431 -8528 4 1102 736 144 15 0 chr13 67798634 67798766 -52485546 + MYSERV6-int LTR ERVK 367 500 -8459 4 1102 3952 192 26 5 chr13 67798794 67799567 -52484745 + MERVL_2A-int LTR ERVL 4182 4970 -791 4 1102 853 257 25 17 chr13 67799608 67799919 -52484393 + L1VL4 LINE L1 798 1124 -5533 4 1102 696 145 0 0 chr13 67801194 67801339 -52482973 + L1VL4 LINE L1 1108 1252 -5732 4 1102 431 55 0 0 chr13 67801408 67801463 -52482849 + B2_Mm2 SINE B2 47 101 -94 4 1102 7471 193 42 16 chr13 67801516 67802288 -52482024 + MusHAL1 LINE L1 55 848 -1864 4 1102 555 16 0 0 chr13 67802288 67802352 -52481960 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1102 7471 193 42 16 chr13 67802352 67803430 -52480882 + MusHAL1 LINE L1 849 1954 -758 4 1102 4384 138 38 4 chr13 67803429 67804245 -52480067 + L1VL4 LINE L1 4458 5301 -576 4 1102 1109 195 12 40 chr13 67804352 67804603 -52479709 - RMER12 LTR ERVK -551 771 528 4 1102 2530 147 61 12 chr13 67804609 67805099 -52479213 + RLTR31_Mur LTR ERVK 40 553 0 4 1102 1969 185 45 87 chr13 67805101 67805320 -52478992 - RMER12 LTR ERVK -782 540 321 4 1102 1144 42 0 7 chr13 67805320 67805463 -52478849 + B1_Mus2 SINE Alu 2 143 -4 4 1102 1969 185 45 87 chr13 67805463 67805759 -52478553 - RMER12 LTR ERVK -1002 320 47 4 1102 300 347 57 24 chr13 67805760 67805884 -52478428 - MTE2b LTR MaLR -250 129 2 4 1102 630 26 0 0 chr13 67805953 67806029 -52478283 + (TATG)n Simple_repeat Simple_repeat 1 76 0 4 1102 260 401 15 15 chr13 67806030 67806164 -52478148 - RSINE1 SINE B4 -27 138 5 4 1102 711 326 114 3 chr13 67806178 67806538 -52477774 - MTE-int LTR MaLR -40 1540 1141 4 1102 270 253 57 49 chr13 67806756 67806950 -52477362 - MMSAT4 Satellite Satellite -6 195 1 4 1102 189 0 0 0 chr13 67806986 67807007 -52477305 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 4 1102 7188 82 0 1 chr13 67807030 67808064 -52476248 - L1Md_F2 LINE L1 -11 6571 5540 4 1102 1213 80 17 0 chr13 67808057 67808233 -52476079 - L1Md_F2 LINE L1 -3138 2745 2567 4 1102 601 127 9 9 chr13 67808227 67808338 -52475974 - L1VL1 LINE L1 -6156 266 156 4 1102 720 183 31 62 chr13 67808754 67808946 -52475366 - B2_Mm2 SINE B2 -9 186 1 4 1102 346 256 41 41 chr13 67808991 67809461 -52474851 - MMSAT4 Satellite Satellite 0 470 1 4 1102 348 221 62 62 chr13 67809500 67809711 -52474601 - MMSAT4 Satellite Satellite -5 211 1 4 1102 188 77 57 19 chr13 67810277 67810330 -52473982 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 1102 1910 250 13 66 chr13 67810404 67810948 -52473364 + RLTR12B LTR ERVK 3 517 -11 4 1102 271 250 20 20 chr13 67811828 67811926 -52472386 - MurSatRep1 Unknown Unknown -1409 728 631 4 1102 466 245 19 71 chr13 67811975 67812129 -52472183 + RLTR11B LTR ERVK 1 146 -307 5 1102 10415 157 36 45 chr13 67812349 67813058 -52471254 + Lx5 LINE L1 3614 4284 -1593 5 1102 995 130 0 0 chr13 67813058 67813204 -52471108 + B1_Mus2 SINE Alu 2 147 0 5 1102 10415 157 36 45 chr13 67813204 67813939 -52470373 + Lx5 LINE L1 4285 4994 -883 5 1102 1270 84 28 11 chr13 67813939 67814120 -52470192 + B2_Mm2 SINE B2 5 188 -7 5 1102 10415 157 36 45 chr13 67814120 67814900 -52469412 + Lx5 LINE L1 4995 5820 -57 5 1102 2533 181 157 6 chr13 67814903 67815431 -52468881 - RMER19C LTR ERVK -3 608 1 5 1102 3443 232 61 34 chr13 67815431 67816542 -52467770 + Lx5 LINE L1 5835 7058 0 5 1102 16256 108 87 4 chr13 67816567 67820981 -52463331 + L1Md_F LINE L1 392 5590 -296 5 1102 7831 50 11 6 chr13 67820981 67821971 -52462341 + L1Md_F2 LINE L1 5588 6582 0 5 1102 391 278 27 18 chr13 67822802 67822912 -52461400 - ID_B1 SINE B4 -5 219 109 5 1102 283 286 148 16 chr13 67822912 67822929 -52461383 - B1F SINE Alu -4 144 1 5 1102 1826 274 36 10 chr13 67823375 67823895 -52460417 + RMER5 LTR ERV1 1 534 0 5 1102 228 86 0 0 chr13 67823929 67823964 -52460348 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 5 1102 884 131 0 0 chr13 67823981 67824111 -52460201 - B2_Mm2 SINE B2 -64 131 2 5 1102 260 265 36 36 chr13 67826076 67826213 -52458099 - MMSAT4 Satellite Satellite -1 167 31 5 1102 306 205 69 69 chr13 67826244 67826375 -52457937 - MMSAT4 Satellite Satellite -1 167 37 5 1102 647 281 34 6 chr13 67826469 67826648 -52457664 - MTC LTR MaLR -237 184 1 5 1102 789 191 12 0 chr13 67827920 67828082 -52456230 + L1_Mur2 LINE L1 4455 4618 -1259 5 1102 396 0 0 0 chr13 67828084 67828128 -52456184 + (TA)n Simple_repeat Simple_repeat 1 44 0 5 1102 1686 280 44 14 chr13 67828487 67829005 -52455307 + RMER5 LTR ERV1 1 534 0 5 1102 192 97 0 0 chr13 67829870 67829901 -52454411 + (C)n Simple_repeat Simple_repeat 1 31 0 5 1102 230 239 0 0 chr13 67831146 67831192 -52453120 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1102 1568 173 118 12 chr13 67832444 67832784 -52451528 + RLTR1 LTR ERV1 249 624 0 5 1102 1235 61 0 0 chr13 67833215 67833362 -52450950 - B1_Mus2 SINE Alu 0 147 1 5 1102 2044 153 113 8 chr13 67833401 67833763 -52450549 + RLTR9D LTR ERVK 1 400 -3 5 1102 305 278 27 18 chr13 67833832 67833942 -52450370 - RLTR42-int LTR ERVK -3626 3627 3517 5 1102 4642 94 5 2 chr13 67834229 67834814 -52449498 - LTRIS_Mus LTR ERV1 0 587 1 5 1102 1090 214 15 139 chr13 67835137 67835539 -52448773 - MMETn-int LTR ERVK -4492 352 1 5 1102 1088 182 190 48 chr13 67835540 67835898 -52448414 - RLTR9E LTR ERVK 0 409 1 5 1102 634 238 48 0 chr13 67836117 67836264 -52448048 - RLTR42-int LTR ERVK -2791 2731 2578 5 1102 402 74 0 0 chr13 67836266 67836320 -52447992 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1102 237 281 100 15 chr13 67836345 67836475 -52447837 + L1MC4 LINE L1 6602 6742 -1300 5 1102 1030 235 66 89 chr13 67836478 67836694 -52447618 - RLTR42-int LTR ERVK -3016 2506 2308 5 1102 906 230 116 68 chr13 67836694 67836749 -52447563 + RMER6B LTR ERVK 2 62 -399 5 1102 386 20 20 0 chr13 67836749 67836800 -52447512 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1102 906 230 116 68 chr13 67836800 67837183 -52447129 + RMER6B LTR ERVK 63 460 -1 5 1102 1030 235 66 89 chr13 67837183 67837234 -52447078 - RLTR42-int LTR ERVK -3215 2307 2269 5 1102 1358 82 16 32 chr13 67837234 67837423 -52446889 + B2_Mm2 SINE B2 2 187 -8 5 1102 1030 235 66 89 chr13 67837423 67837625 -52446687 - RLTR42-int LTR ERVK -3254 2268 2047 5 1102 359 301 158 9 chr13 67838120 67838348 -52445964 - RMER5 LTR ERV1 -72 462 201 5 1102 3403 58 2 2 chr13 67838899 67839295 -52445017 + MTA_Mm LTR MaLR 1 396 0 5 1102 366 198 37 0 chr13 67839807 67839888 -52444424 + HY1 scRNA scRNA 3 86 -26 5 1102 1022 86 235 7 chr13 67840035 67840188 -52444124 - B2_Mm2 SINE B2 -6 189 2 5 1102 2462 156 36 24 chr13 67840489 67840971 -52443341 + RLTR31A_Mm LTR ERVK 1 584 0 5 1102 3862 165 67 7 chr13 67841014 67841733 -52442579 + Lx4B LINE L1 6265 7026 -32 5 1102 3043 118 8 83 chr13 67841898 67842425 -52441887 - RLTR1C LTR ERV1 -16 487 1 5 1102 21 36 0 0 chr13 67843036 67843064 -52441248 + AT_rich Low_complexity Low_complexity 1 28 0 5 1102 662 228 81 0 chr13 67843426 67843562 -52440750 + B1_Mur3 SINE Alu 3 149 0 5 1102 2089 157 175 11 chr13 67843960 67844516 -52439796 + RLTR17 LTR ERVK 1 648 -44 5 1102 243 0 0 0 chr13 67844517 67844544 -52439768 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1102 256 206 62 97 chr13 67846051 67846164 -52438148 + RLTR42-int LTR ERVK 901 1009 -4513 5 1102 717 23 0 0 chr13 67846618 67846705 -52437607 + (CA)n Simple_repeat Simple_repeat 2 88 0 5 1102 782 205 21 37 chr13 67846882 67847070 -52437242 + RLTR20A2 LTR ERVK 386 578 0 5 1102 1271 251 108 8 chr13 67848258 67848627 -52435685 - MTD LTR MaLR -13 406 1 5 1102 530 228 48 48 chr13 67849473 67850594 -52433718 - MMSAT4 Satellite Satellite -25 1121 1 5 1102 1281 68 0 0 chr13 67850803 67850951 -52433361 - B1_Mus1 SINE Alu 0 148 1 5 1102 870 85 8 0 chr13 67850952 67851070 -52433242 - B2_Mm1t SINE B2 -74 119 1 5 1102 380 351 20 7 chr13 67851681 67851833 -52432479 + RSINE1 SINE B4 9 162 -3 5 1102 401 289 28 56 chr13 67852015 67852253 -52432059 + B4 SINE B4 1 288 -4 5 1102 202 319 0 0 chr13 67852268 67852337 -52431975 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1102 944 137 14 14 chr13 67853020 67853168 -52431144 + B1_Mus1 SINE Alu 1 148 0 5 1102 288 77 0 0 chr13 67853184 67853223 -52431089 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 5 1102 255 271 20 20 chr13 67853335 67853433 -52430879 - MurSatRep1 Unknown Unknown -1409 728 631 5 1102 375 346 100 29 chr13 67853636 67853950 -52430362 - L1MA6 LINE L1 -150 6150 5805 5 1102 303 248 137 73 chr13 67854109 67854453 -52429859 + Lx9 LINE L1 5900 6265 -1379 5 1102 587 274 67 6 chr13 67854539 67854719 -52429593 - B3 SINE B2 0 216 26 5 1102 21 0 0 0 chr13 67854719 67854740 -52429572 + AT_rich Low_complexity Low_complexity 1 21 0 5 1102 21 0 0 0 chr13 67854802 67854823 -52429489 + AT_rich Low_complexity Low_complexity 1 21 0 5 1102 189 0 0 0 chr13 67855483 67855504 -52428808 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1102 239 245 41 0 chr13 67856497 67856546 -52427766 + PB1 SINE Alu 23 73 -54 5 1102 1743 152 98 20 chr13 67857433 67857772 -52426540 + MTC LTR MaLR 1 366 -55 5 1102 337 244 113 75 chr13 67857772 67857958 -52426354 + MT2B LTR ERVL 2 194 -407 5 1102 315 295 0 0 chr13 67857990 67858051 -52426261 + URR1B DNA MER1_type 1 61 -164 5 1102 1541 184 182 11 chr13 67858388 67858740 -52425572 + MTC LTR MaLR 1 412 -9 5 1102 5525 169 73 13 chr13 67858745 67859817 -52424495 + MTC-int LTR MaLR 1 1136 -122 5 1102 650 230 32 0 chr13 67859858 67859984 -52424328 - B3 SINE B2 -86 130 1 5 1102 474 141 12 0 chr13 67859985 67860070 -52424242 + MTC-int LTR MaLR 1121 1206 -52 5 1102 1216 74 0 0 chr13 67860093 67860241 -52424071 - B1_Mus1 SINE Alu 0 148 1 5 1102 792 229 16 37 chr13 67860278 67860452 -52423860 + MTC LTR MaLR 161 330 -91 5 1102 3061 200 41 35 chr13 67860452 67861090 -52423222 + RLTR26 LTR ERVK 1 642 0 5 1102 524 167 10 10 chr13 67861090 67861190 -52423122 + MTC LTR MaLR 320 419 0 5 1102 1093 212 21 17 chr13 67861192 67861427 -52422885 + L1_Rod LINE L1 5548 5783 -64 5 1102 260 321 24 0 chr13 67861526 67861610 -52422702 + 4.5SRNA scRNA scRNA 6 91 -3 5 1102 905 264 10 0 chr13 67861618 67861819 -52422493 + B3 SINE B2 9 211 -5 5 1102 1184 102 0 0 chr13 67861842 67861989 -52422323 + B1_Mus1 SINE Alu 2 148 0 5 1102 4459 206 28 16 chr13 67862080 67863062 -52421250 - MYSERV-int LTR ERVK -254 6296 5304 5 1102 451 301 42 7 chr13 67863062 67863206 -52421106 - RMER4A LTR ERVK -27 439 291 5 1102 1516 147 24 0 chr13 67863217 67863469 -52420843 + RLTR11A2 LTR ERVK 270 527 0 5 1102 1674 22 0 21 chr13 67863780 67863968 -52420344 - B2_Mm1a SINE B2 -6 187 4 5 1102 244 246 52 57 chr13 67864156 67864300 -52420012 - MMSAT4 Satellite Satellite -75 143 1 5 1102 262 292 21 42 chr13 67864573 67864716 -52419596 - MMSAT4 Satellite Satellite -1 167 28 5 1102 1748 26 0 0 chr13 67865007 67865196 -52419116 + B2_Mm1a SINE B2 2 190 -3 5 1102 944 91 192 13 chr13 67865269 67865425 -52418887 - B2_Mm1t SINE B2 -8 185 2 5 1102 267 263 46 46 chr13 67865563 67865771 -52418541 - MMSAT4 Satellite Satellite -14 208 1 5 1102 287 294 25 25 chr13 67865873 67866098 -52418214 - MMSAT4 Satellite Satellite 0 225 1 5 1102 510 237 14 43 chr13 67866126 67866267 -52418045 - MMSAT4 Satellite Satellite -1 167 31 5 1102 601 229 35 14 chr13 67866976 67867118 -52417194 - B1_Mur3 SINE Alu 0 149 5 5 1102 477 122 0 0 chr13 67867315 67867389 -52416923 + (CATA)n Simple_repeat Simple_repeat 3 76 0 5 1102 288 0 0 0 chr13 67867496 67867528 -52416784 + (TC)n Simple_repeat Simple_repeat 2 33 0 5 1102 261 0 0 0 chr13 67867528 67867556 -52416756 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1102 872 261 100 18 chr13 67869427 67869708 -52414604 + RLTR42-int LTR ERVK 1051 1354 -4168 5 1102 722 185 44 7 chr13 67869710 67869846 -52414466 + B1_Mur3 SINE Alu 1 141 -8 5 1102 600 14 0 0 chr13 67869847 67869916 -52414396 + (CAAAA)n Simple_repeat Simple_repeat 5 73 0 5 1102 241 213 65 16 chr13 67870270 67870332 -52413980 + HY1 scRNA scRNA 21 85 -27 5 1102 1155 96 0 0 chr13 67870424 67870570 -52413742 - B1_Mus1 SINE Alu 0 148 3 5 1102 574 202 16 16 chr13 67871022 67871143 -52413169 - B1_Mur4 SINE Alu 0 150 30 5 1102 808 191 14 70 chr13 67871213 67871427 -52412885 + RLTR42-int LTR ERVK 1895 2096 -3426 5 1102 2596 216 52 66 chr13 67871530 67872345 -52411967 + RLTR42-int LTR ERVK 2060 2862 -2660 5 1102 667 221 33 33 chr13 67872781 67872931 -52411381 - B1_Mur4 SINE Alu 0 150 1 5 1102 262 267 32 32 chr13 67874273 67874397 -52409915 - MurSatRep1 Unknown Unknown -1409 728 605 5 1102 28 0 0 0 chr13 67874420 67874448 -52409864 + AT_rich Low_complexity Low_complexity 1 28 0 5 1102 1642 219 114 3 chr13 67874476 67874843 -52409469 + MTD LTR MaLR 12 419 0 5 1102 23 0 0 0 chr13 67875332 67875355 -52408957 + AT_rich Low_complexity Low_complexity 1 23 0 5 1102 1106 246 69 20 chr13 67875653 67875956 -52408356 - Lx5 LINE L1 -2 7048 6731 5 1102 180 0 0 0 chr13 67876522 67876542 -52407770 + (G)n Simple_repeat Simple_repeat 1 20 0 5 1102 603 209 55 0 chr13 67876647 67876757 -52407555 - RLTR14-int LTR ERV1 -3143 2174 2059 5 1102 1750 165 20 10 chr13 67877468 67877768 -52406544 - RLTR14-int LTR ERV1 -3269 2048 1746 5 1102 319 267 52 13 chr13 67877889 67877991 -52406321 - RLTR14-int LTR ERV1 -3613 1704 1615 6 1102 1451 216 21 80 chr13 67877993 67878259 -52406053 - MTC-int LTR MaLR -238 1020 776 6 1102 1680 51 0 0 chr13 67878259 67878455 -52405857 - L1Md_T LINE L1 0 6582 6387 6 1102 1451 216 21 80 chr13 67878455 67878561 -52405751 - MTC-int LTR MaLR -483 775 670 6 1102 243 0 0 0 chr13 67879383 67879410 -52404902 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1102 376 307 0 0 chr13 67880088 67880176 -52404136 - PB1D10 SINE Alu -8 109 22 6 1102 838 58 41 24 chr13 67880375 67880498 -52403814 - B1_Mus1 SINE Alu -23 125 1 6 1102 394 254 122 42 chr13 67880498 67880575 -52403737 - B4 SINE B4 -200 92 1 6 1102 357 241 34 85 chr13 67881866 67881922 -52402390 - PB1D10 SINE Alu -24 123 12 6 1102 365 194 0 0 chr13 67881922 67881984 -52402328 - ID_B1 SINE B4 -70 154 93 6 1102 465 248 8 55 chr13 67882005 67882133 -52402179 - RSINE1 SINE B4 -41 124 3 6 1102 1068 173 206 15 chr13 67882413 67882691 -52401621 + ORR1D1 LTR MaLR 5 333 -41 6 1102 907 175 21 0 chr13 67882691 67882834 -52401478 + B1_Mur4 SINE Alu 2 147 -3 6 1102 800 242 115 72 chr13 67882834 67882902 -52401410 + ORR1D1 LTR MaLR 287 365 -5 6 1102 245 271 0 0 chr13 67884783 67884842 -52399470 + MurSatRep1 Unknown Unknown 670 728 -1409 6 1102 1478 168 57 10 chr13 67885480 67885781 -52398531 + RLTR31_Mm LTR ERVK 1 315 -246 6 1102 1087 60 22 0 chr13 67885870 67886004 -52398308 - B1_Mus1 SINE Alu -11 137 1 6 1102 254 289 141 16 chr13 67886476 67886743 -52397569 - L1MB2 LINE L1 -209 5974 5677 6 1102 845 206 193 6 chr13 67886785 67886966 -52397346 - B3 SINE B2 -1 215 1 6 1102 568 247 44 47 chr13 67887091 67888560 -52395752 + MMSAT4 Satellite Satellite 1 1464 0 6 1102 1094 191 52 0 chr13 67889128 67889338 -52394974 - URR1B DNA MER1_type -1 224 4 6 1102 1332 220 48 173 chr13 67889384 67889586 -52394726 + MTD LTR MaLR 1 206 -213 6 1102 1046 214 15 0 chr13 67889586 67889792 -52394520 + B3 SINE B2 1 209 -7 6 1102 1332 220 48 173 chr13 67889792 67890068 -52394244 + MTD LTR MaLR 207 419 0 6 1102 1551 180 52 25 chr13 67890106 67890430 -52393882 - RLTR23 LTR ERV1 0 430 98 6 1102 937 136 95 0 chr13 67890467 67890636 -52393676 - Lx2 LINE L1 0 6997 6813 6 1102 2966 236 66 129 chr13 67890692 67890982 -52393330 + MTC-int LTR MaLR 35 256 -1002 6 1102 1167 75 0 7 chr13 67890982 67891129 -52393183 - B1_Mus2 SINE Alu 0 147 2 6 1102 2966 236 66 129 chr13 67891129 67892097 -52392215 + MTC-int LTR MaLR 257 1214 -44 6 1102 2577 60 188 66 chr13 67892095 67892579 -52391733 - RLTR6_Mm LTR ERV1 -68 586 44 6 1102 229 145 219 31 chr13 67892620 67892684 -52391628 - RLTR6_Mm LTR ERV1 -578 76 1 6 1102 1599 249 40 2 chr13 67892742 67893063 -52391249 + MTD LTR MaLR 3 333 -86 6 1102 1402 144 19 255 chr13 67893063 67893577 -52390735 + RLTR9C LTR ERVK 1 393 0 6 1102 1599 249 40 2 chr13 67893577 67893657 -52390655 + MTD LTR MaLR 334 419 0 6 1102 1130 257 97 9 chr13 67894042 67894384 -52389928 + MTD LTR MaLR 48 419 0 6 1102 1775 128 56 30 chr13 67894473 67894778 -52389534 + L1_Mus4 LINE L1 6317 6629 -7 6 1102 255 133 0 0 chr13 67894976 67895021 -52389291 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1103 363 239 0 54 chr13 67895452 67895545 -52388767 + B4 SINE B4 80 167 -125 6 1103 531 158 2 0 chr13 67895466 67895566 -52388746 + B1_Mur4 SINE Alu 5 104 -16 6 1103 243 0 0 0 chr13 67895607 67895634 -52388678 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1103 289 0 49 0 chr13 67896155 67896196 -52388116 + (TTTTTG)n Simple_repeat Simple_repeat 4 46 0 6 1103 982 102 12 35 chr13 67896641 67896813 -52387499 + L1_Mus3 LINE L1 6471 6638 0 6 1103 254 305 0 0 chr13 67897047 67897106 -52387206 - L2a LINE L2 -31 3395 3337 6 1103 181 373 0 0 chr13 67897301 67897360 -52386952 - L2a LINE L2 -31 3395 3337 6 1103 1259 92 43 10 chr13 67897415 67897624 -52386688 - RLTR9E LTR ERVK 0 409 194 6 1103 242 302 12 0 chr13 67898470 67898556 -52385756 + (TG)n Simple_repeat Simple_repeat 1 87 0 6 1103 434 136 12 0 chr13 67898800 67898881 -52385431 + (GGA)n Simple_repeat Simple_repeat 1 82 0 6 1103 552 15 0 0 chr13 67899115 67899180 -52385132 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 6 1103 718 96 0 0 chr13 67899180 67899284 -52385028 - B1_Mur3 SINE Alu -13 136 33 6 1103 446 143 92 5 chr13 67899288 67899400 -52384912 - RLTR13D6 LTR ERVK -68 834 640 6 1103 1078 115 6 0 chr13 67899398 67899563 -52384749 - B2_Mm2 SINE B2 -29 166 1 6 1103 4604 94 40 16 chr13 67899564 67900306 -52384006 - RLTR13D6 LTR ERVK -142 760 1 6 1103 1021 105 28 0 chr13 67900394 67900537 -52383775 + B1_Mus1 SINE Alu 2 148 0 6 1103 1452 59 0 8 chr13 67900537 67900775 -52383537 + (GAAA)n Simple_repeat Simple_repeat 1 236 0 6 1103 249 33 0 0 chr13 67901993 67902023 -52382289 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 6 1103 1208 62 0 0 chr13 67902283 67902429 -52381883 + B1_Mm SINE Alu 2 147 0 6 1103 519 95 0 0 chr13 67902429 67902503 -52381809 + (A)n Simple_repeat Simple_repeat 1 74 0 6 1103 549 180 161 15 chr13 67902896 67903026 -52381286 - B1_Mur2 SINE Alu 0 149 1 6 1103 182 257 157 10 chr13 67903055 67903157 -52381155 - MIR SINE MIR -67 141 25 6 1103 229 208 35 70 chr13 67905437 67905538 -52378774 + (TCTCTG)n Simple_repeat Simple_repeat 1 99 0 6 1103 477 0 0 0 chr13 67905538 67905591 -52378721 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1103 297 0 0 0 chr13 67905591 67905623 -52378689 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1103 229 158 8 17 chr13 67905623 67905677 -52378635 + (TCTCTG)n Simple_repeat Simple_repeat 1 53 0 6 1103 389 250 29 11 chr13 67905684 67905858 -52378454 + (TCTG)n Simple_repeat Simple_repeat 2 178 0 6 1103 385 289 20 0 chr13 67905808 67905957 -52378355 + CT-rich Low_complexity Low_complexity 1 152 0 6 1103 201 74 0 0 chr13 67906019 67906046 -52378266 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 6 1103 513 251 126 16 chr13 67906793 67906975 -52377337 + B3 SINE B2 2 203 -13 6 1103 363 23 0 0 chr13 67907330 67907374 -52376938 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1103 472 303 39 17 chr13 67907397 67907578 -52376734 + RMER4A LTR ERVK 251 435 -31 6 1103 3171 198 38 107 chr13 67907578 67908107 -52376205 + MYSERV6-int LTR ERVK 7760 8242 -717 6 1103 1090 109 0 0 chr13 67908107 67908254 -52376058 - B1_Mus1 SINE Alu -1 147 1 6 1103 3171 198 38 107 chr13 67908254 67908761 -52375551 + MYSERV6-int LTR ERVK 8243 8724 -235 6 1103 841 279 10 0 chr13 67908854 67909055 -52375257 - B3 SINE B2 -5 211 9 6 1103 266 307 23 0 chr13 67909063 67909151 -52375161 - 4.5SRNA scRNA scRNA -3 91 2 6 1103 4283 209 110 8 chr13 67909186 67909462 -52374850 - Lx9 LINE L1 0 7644 7334 6 1103 3030 74 10 5 chr13 67909462 67909856 -52374456 + MTA_Mm LTR MaLR 1 396 0 6 1103 4283 209 110 8 chr13 67909856 67910597 -52373715 - Lx9 LINE L1 -311 7333 6523 6 1103 1304 172 0 25 chr13 67910598 67910842 -52373470 - MTB_Mm LTR MaLR -169 238 1 6 1103 471 264 190 12 chr13 67910843 67911096 -52373216 - Lx9 LINE L1 -1189 6455 6158 6 1103 240 220 0 17 chr13 67912010 67912070 -52372242 + (CTG)n Simple_repeat Simple_repeat 3 61 0 6 1103 1373 254 65 35 chr13 67912237 67912670 -52371642 - Lx9 LINE L1 -1612 6032 5587 6 1103 453 194 0 10 chr13 67912678 67912779 -52371533 - MTD LTR MaLR 0 419 320 6 1103 831 237 57 103 chr13 67912779 67913042 -52371270 - RLTR26 LTR ERVK 0 642 392 6 1103 293 242 53 17 chr13 67913813 67913932 -52370380 + RLTR13D3 LTR ERVK 981 1072 -42 6 1103 321 123 0 0 chr13 67915802 67915867 -52368445 + (A)n Simple_repeat Simple_repeat 1 65 0 6 1103 1466 65 0 11 chr13 67916255 67916441 -52367871 - B2_Mm1a SINE B2 -8 185 2 6 1103 2532 50 3 0 chr13 67916497 67916834 -52367478 + ORR1A1 LTR MaLR 1 338 -8 6 1103 7923 59 29 1 chr13 67916838 67917980 -52366332 + ORR1A1-int LTR MaLR 1 1174 -618 6 1103 4308 34 2 0 chr13 67917977 67918543 -52365769 - ORR1A1-int LTR MaLR -1225 567 1 6 1103 2192 65 42 27 chr13 67918547 67918880 -52365432 - ORR1A1 LTR MaLR -8 338 1 6 1103 1884 280 36 24 chr13 67918880 67919513 -52364799 - L1_Rod LINE L1 -103 5744 5104 6 1103 1215 236 9 31 chr13 67919891 67920214 -52364098 - L1_Rod LINE L1 -737 5110 4795 6 1103 1112 293 18 6 chr13 67920293 67920619 -52363693 - MTC-int LTR MaLR -603 655 326 6 1103 794 196 55 16 chr13 67920684 67920866 -52363446 + ORR1D1 LTR MaLR 1 189 -185 6 1103 1055 277 52 27 chr13 67920885 67921252 -52363060 + MTC-int LTR MaLR 281 656 -602 6 1103 386 300 6 25 chr13 67921299 67921491 -52362821 - L1M2 LINE L1 -557 5683 5497 6 1103 365 342 101 14 chr13 67921713 67922009 -52362303 + L1MA6 LINE L1 5836 6157 -143 6 1103 965 80 64 14 chr13 67922244 67922375 -52361937 + B1_Mus1 SINE Alu 1 140 -8 6 1103 288 0 0 0 chr13 67922375 67922407 -52361905 + (GA)n Simple_repeat Simple_repeat 2 33 0 6 1103 258 326 0 0 chr13 67923195 67923293 -52361019 + MurSatRep1 Unknown Unknown 631 728 -1409 6 1103 299 130 19 0 chr13 67923407 67923461 -52360851 + (TC)n Simple_repeat Simple_repeat 1 55 0 6 1103 930 124 14 7 chr13 67923470 67923616 -52360696 - B1_Mus1 SINE Alu -1 147 1 6 1103 267 157 0 0 chr13 67923679 67923730 -52360582 + T-rich Low_complexity Low_complexity 1 51 0 6 1103 356 279 248 38 chr13 67924426 67924664 -52359648 - B4 SINE B4 -4 288 1 6 1103 340 344 20 7 chr13 67924846 67924998 -52359314 - RSINE1 SINE B4 -3 162 9 6 1103 1220 54 0 0 chr13 67925631 67925778 -52358534 + B1_Mus2 SINE Alu 1 147 0 6 1103 252 77 0 0 chr13 67925786 67925825 -52358487 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1103 569 224 46 46 chr13 67925916 67927187 -52357125 + MMSAT4 Satellite Satellite 1 1271 0 6 1103 1141 260 77 3 chr13 67928069 67928405 -52355907 + MTD LTR MaLR 46 406 -13 6 1103 215 246 0 17 chr13 67928832 67928890 -52355422 + (CATATA)n Simple_repeat Simple_repeat 3 59 0 6 1103 646 218 0 49 chr13 67929624 67929788 -52354524 - RLTR20A2 LTR ERVK 0 578 423 6 1103 1136 48 0 27 chr13 67930004 67930153 -52354159 - B1_Mm SINE Alu -1 146 2 6 1103 594 0 0 0 chr13 67930192 67930258 -52354054 + (TG)n Simple_repeat Simple_repeat 2 67 0 6 1103 252 172 88 124 chr13 67930719 67930832 -52353480 - RLTR42-int LTR ERVK -4513 1009 901 6 1103 911 50 0 161 chr13 67931220 67931388 -52352924 + B1_Mm SINE Alu 7 147 0 7 1103 218 56 0 27 chr13 67932363 67932400 -52351912 + (TTTTTG)n Simple_repeat Simple_repeat 6 41 0 7 1103 576 230 82 0 chr13 67932401 67932536 -52351776 - B1_Mur3 SINE Alu -1 148 3 7 1103 1277 234 120 8 chr13 67933713 67934088 -52350224 - MTD LTR MaLR 0 419 3 7 1103 306 252 32 32 chr13 67934161 67934284 -52350028 + MurSatRep1 Unknown Unknown 606 728 -1409 7 1103 2030 125 40 9 chr13 67934927 67935251 -52349061 - Lx4B LINE L1 -464 6594 6261 7 1103 241 150 0 0 chr13 67935259 67935299 -52349013 + Lx4B LINE L1 6238 6277 -781 7 1103 338 0 24 0 chr13 67935307 67935349 -52348963 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 7 1103 1259 75 40 6 chr13 67935351 67935525 -52348787 - B2_Mm2 SINE B2 -15 180 1 7 1103 798 91 0 0 chr13 67935903 67936013 -52348299 + B1_Mus1 SINE Alu 2 111 -37 7 1103 389 224 0 144 chr13 67935913 67936038 -52348274 + MT2B LTR ERVL 175 281 -320 7 1103 396 190 335 7 chr13 67936472 67936617 -52347695 - B3A SINE B2 -9 207 15 7 1103 3080 82 58 2 chr13 67936607 67937070 -52347242 - RLTR13C2 LTR ERVK -319 489 1 7 1103 2247 158 87 5 chr13 67938173 67938562 -52345750 - MTC LTR MaLR 0 421 1 7 1103 237 259 12 24 chr13 67938822 67938905 -52345407 + CT-rich Low_complexity Low_complexity 1 82 0 7 1103 384 326 124 4 chr13 67939350 67939624 -52344688 - L1MC3 LINE L1 -1717 6068 5762 7 1103 1095 61 0 20 chr13 67939647 67939797 -52344515 - B1_Mm SINE Alu 0 147 1 7 1103 325 327 92 31 chr13 67939862 67940089 -52344223 + MLT1D LTR MaLR 7 247 -258 7 1103 303 298 30 50 chr13 67940246 67940444 -52343868 - L1MC3 LINE L1 -1656 4490 4297 7 1103 477 165 38 85 chr13 67940897 67941003 -52343309 - B1_Mus2 SINE Alu -8 139 39 7 1103 1112 63 35 0 chr13 67941008 67941150 -52343162 - B1_Mus2 SINE Alu 0 147 1 7 1103 29 0 0 0 chr13 67945535 67945564 -52338748 + GC_rich Low_complexity Low_complexity 1 29 0 7 1103 2003 111 84 40 chr13 67945564 67945911 -52338401 + RLTR9A LTR ERVK 5 366 -2 7 1103 252 363 35 17 chr13 67946269 67946306 -52338006 - ID_B1 SINE B4 -106 118 2 7 1103 283 308 13 0 chr13 67946306 67946384 -52337928 - ID4 SINE ID -3 80 2 7 1103 1237 108 0 11 chr13 67946527 67946686 -52337626 + B2_Mm2 SINE B2 1 158 -37 7 1103 243 0 0 0 chr13 67946686 67946713 -52337599 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 7 1103 1237 108 0 11 chr13 67946713 67946731 -52337581 + B2_Mm2 SINE B2 159 176 -19 7 1103 261 0 0 0 chr13 67947132 67947161 -52337151 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1103 287 331 74 17 chr13 67948148 67948323 -52335989 - RMER15 LTR ERVL -91 484 300 7 1103 240 306 81 10 chr13 67948375 67948474 -52335838 - RMER15 LTR ERVL -445 130 25 7 1103 619 281 65 10 chr13 67948622 67948823 -52335489 - RMER15-int LTR ERVL -598 4401 4190 7 1103 347 315 62 16 chr13 67948965 67949094 -52335218 + L1MEg LINE L1 1839 1973 -4111 7 1103 429 318 47 12 chr13 67949122 67949294 -52335018 - Lx7 LINE L1 -394 7302 7125 7 1103 26 0 0 0 chr13 67949582 67949608 -52334704 + AT_rich Low_complexity Low_complexity 1 26 0 7 1103 636 343 30 71 chr13 67950705 67951100 -52333212 - RMER15-int LTR ERVL -3236 1763 1385 7 1103 1719 154 41 88 chr13 67951246 67951610 -52332702 - ORR1B1 LTR MaLR -7 387 41 7 1103 2288 8 114 0 chr13 67952181 67952443 -52331869 + RLTR10B LTR ERVK 1 292 0 7 1103 285 29 0 0 chr13 67952467 67952501 -52331811 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1103 445 236 59 26 chr13 67953627 67953779 -52330533 + Lx9 LINE L1 7255 7411 -233 7 1103 1274 136 61 5 chr13 67954769 67954983 -52329329 + URR1A DNA MER1_type 1 226 0 7 1103 423 273 20 20 chr13 67956720 67956873 -52327439 + L1MA9 LINE L1 6157 6309 -3 7 1103 294 278 50 20 chr13 67956904 67957003 -52327309 - MTE2a LTR MaLR -6 373 272 7 1103 3917 42 19 10 chr13 67957073 67957554 -52326758 + L1Md_F3 LINE L1 6100 6584 0 7 1103 407 293 25 33 chr13 67957618 67957738 -52326574 - Lx8 LINE L1 -220 7253 7135 7 1103 298 269 19 37 chr13 67958011 67958119 -52326193 - Lx7 LINE L1 -787 6909 6804 7 1103 338 227 0 51 chr13 67958114 67958193 -52326119 - Lx8 LINE L1 -814 6659 6585 7 1103 186 43 0 0 chr13 67958549 67958572 -52325740 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 7 1103 1017 132 0 0 chr13 67959218 67959536 -52324776 + (TG)n Simple_repeat Simple_repeat 1 318 0 7 1103 221 0 0 33 chr13 67959908 67959938 -52324374 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1103 1011 191 50 48 chr13 67960220 67960543 -52323769 + RMER17C LTR ERVK 1 407 -3 7 1103 380 255 63 9 chr13 67960715 67960826 -52323486 + ORR1E LTR MaLR 1 117 -242 7 1103 2119 54 0 21 chr13 67960826 67961111 -52323201 - Lx3_Mus LINE L1 -573 5313 5035 7 1103 4458 71 13 2 chr13 67961111 67961714 -52322598 + Lx3_Mus LINE L1 5312 5918 -1091 7 1103 207 0 0 0 chr13 67961714 67961737 -52322575 + (CAA)n Simple_repeat Simple_repeat 2 24 0 7 1103 3837 72 0 0 chr13 67961737 67961887 -52322425 + Lx3_Mus LINE L1 5919 6068 -941 7 1103 378 0 0 0 chr13 67961887 67961929 -52322383 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1103 366 23 0 0 chr13 67961929 67961971 -52322341 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 1103 1167 50 0 21 chr13 67961972 67962116 -52322196 + B1_Mm SINE Alu 4 144 -3 7 1103 194 0 39 0 chr13 67962116 67962142 -52322170 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1103 201 182 0 0 chr13 67962142 67962175 -52322137 + A-rich Low_complexity Low_complexity 1 33 0 7 1103 654 263 55 98 chr13 67962175 67962205 -52322107 + ORR1E LTR MaLR 98 127 -232 7 1103 2408 167 0 15 chr13 67962205 67962617 -52321695 - MTB_Mm LTR MaLR 0 407 2 7 1103 654 263 55 98 chr13 67962617 67962860 -52321452 + ORR1E LTR MaLR 128 359 0 7 1103 530 98 12 0 chr13 67963014 67963096 -52321216 + (TCC)n Simple_repeat Simple_repeat 2 84 0 7 1103 744 167 14 35 chr13 67963125 67963268 -52321044 - B1_Mur3 SINE Alu 0 149 10 7 1103 316 277 170 0 chr13 67963693 67963805 -52320507 + MLT1C LTR MaLR 1 131 -336 7 1103 941 54 132 0 chr13 67963896 67964025 -52320287 + B1_Mm SINE Alu 2 147 0 7 1103 237 65 0 0 chr13 67964954 67964985 -52319327 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1103 25 0 0 0 chr13 67965017 67965042 -52319270 + GC_rich Low_complexity Low_complexity 1 25 0 7 1103 765 137 6 70 chr13 67965351 67965503 -52318809 + B2_Mm2 SINE B2 2 155 -61 7 1103 180 0 0 0 chr13 67965523 67965543 -52318769 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 7 1103 723 12 0 0 chr13 67965597 67965681 -52318631 + (TCCC)n Simple_repeat Simple_repeat 4 87 0 7 1103 198 0 0 0 chr13 67966591 67966613 -52317699 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1103 268 185 15 15 chr13 67968601 67968667 -52315645 + CT-rich Low_complexity Low_complexity 1 66 0 7 1103 444 19 19 0 chr13 67969925 67969979 -52314333 - MTB LTR MaLR 0 400 346 7 1103 2102 78 123 3 chr13 67969965 67970273 -52314039 - MT2C_Mm LTR ERVL -130 345 1 7 1103 276 234 59 93 chr13 67970273 67970299 -52314013 - ORR1A3-int LTR MaLR -1350 613 592 7 1103 31 26 0 0 chr13 67970452 67970490 -52313822 + AT_rich Low_complexity Low_complexity 1 38 0 7 1103 390 221 23 0 chr13 67970573 67970662 -52313650 - MLT1B LTR MaLR -20 370 297 7 1103 248 228 175 13 chr13 67970667 67970743 -52313569 - ID4_ SINE ID -60 92 5 7 1103 1541 82 157 22 chr13 67971528 67971802 -52312510 - RLTR6_Mm LTR ERV1 -68 586 276 7 1103 860 142 6 99 chr13 67971815 67971987 -52312325 - RLTR6_Mm LTR ERV1 -498 156 1 7 1103 388 91 30 0 chr13 67972960 67973026 -52311286 + (GA)n Simple_repeat Simple_repeat 2 69 0 7 1103 1197 43 0 0 chr13 67973684 67973822 -52310490 + B1_Mus2 SINE Alu 1 138 -9 7 1103 315 0 0 0 chr13 67973822 67973857 -52310455 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1103 366 311 58 0 chr13 67974479 67974582 -52309730 - PB1D10 SINE Alu -8 109 1 7 1103 180 0 0 0 chr13 67975060 67975080 -52309232 + (TGG)n Simple_repeat Simple_repeat 2 21 0 7 1103 1259 27 0 20 chr13 67975193 67975343 -52308969 - B1_Mus2 SINE Alu 0 147 1 7 1103 973 130 59 11 chr13 67975345 67975531 -52308781 + RMER17C LTR ERVK 209 403 -7 7 1103 186 43 0 0 chr13 67976023 67976046 -52308266 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 7 1103 317 303 53 57 chr13 67976067 67976215 -52308097 + L1MEf LINE L1 1920 2077 -4123 7 1103 900 224 25 5 chr13 67976215 67976417 -52307895 + B3 SINE B2 5 210 -6 7 1103 317 303 53 57 chr13 67976417 67976513 -52307799 + L1MEf LINE L1 2078 2163 -4037 7 1103 1839 207 34 3 chr13 67976734 67977117 -52307195 + RMER16 LTR ERVK 1 525 -8 7 1103 3488 62 136 38 chr13 67977228 67977778 -52306534 - RLTR6_Mm LTR ERV1 -50 604 1 7 1103 1514 189 57 91 chr13 67978493 67978878 -52305434 - ORR1D1 LTR MaLR 0 374 3 7 1103 492 18 0 0 chr13 67979030 67979087 -52305225 + (TAGA)n Simple_repeat Simple_repeat 3 59 0 7 1103 364 322 17 9 chr13 67979177 67979293 -52305019 + ORR1E LTR MaLR 1 117 -242 7 1103 361 195 45 11 chr13 67979360 67979448 -52304864 + ORR1E LTR MaLR 289 379 0 7 1103 374 326 181 60 chr13 67979474 67979592 -52304720 - MLT1C LTR MaLR -25 442 326 7 1103 959 141 167 11 chr13 67979592 67979778 -52304534 - B3 SINE B2 -1 215 1 7 1103 374 326 181 60 chr13 67979778 67980024 -52304288 - MLT1C LTR MaLR -142 325 34 7 1103 1555 283 105 25 chr13 67980218 67980859 -52303453 - MER67C LTR ERV1 -19 692 1 7 1103 1105 201 43 192 chr13 67981390 67981672 -52302640 - ORR1D1 LTR MaLR -2 372 147 7 1103 531 0 0 0 chr13 67981672 67981731 -52302581 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1103 261 0 0 0 chr13 67981731 67981759 -52302553 + (GA)n Simple_repeat Simple_repeat 2 30 0 7 1103 1105 201 43 192 chr13 67981759 67981912 -52302400 - ORR1D1 LTR MaLR -228 146 2 7 1103 240 242 10 62 chr13 67981938 67982035 -52302277 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 7 1103 644 333 39 35 chr13 67982040 67982326 -52301986 - B4A SINE B4 -4 288 2 7 1103 1312 79 25 36 chr13 67983668 67983864 -52300448 + B2_Mm2 SINE B2 2 195 0 7 1103 415 314 57 39 chr13 67984534 67984783 -52299529 + RLTR15 LTR ERVK 33 264 -95 7 1103 852 173 0 0 chr13 67985191 67985370 -52298942 + (TG)n Simple_repeat Simple_repeat 1 179 0 7 1103 225 0 0 0 chr13 67985397 67985422 -52298890 + (TG)n Simple_repeat Simple_repeat 1 25 0 7 1103 1056 30 90 0 chr13 67985440 67985573 -52298739 - B1_Mus1 SINE Alu -2 146 2 7 1103 2198 58 0 23 chr13 67985824 67986123 -52298189 - RLTR4_Mm LTR ERV1 0 742 451 7 1103 1930 75 22 11 chr13 67986100 67986371 -52297941 - RLTR4_Mm LTR ERV1 -468 274 1 7 1103 61945 66 3 1 chr13 67986373 67993962 -52290350 - MuLV-int LTR ERV1 0 7606 1 7 1103 2198 58 0 23 chr13 67993964 67994263 -52290049 - RLTR4_Mm LTR ERV1 0 742 451 7 1103 1930 75 22 11 chr13 67994240 67994511 -52289801 - RLTR4_Mm LTR ERV1 -468 274 1 7 1103 3309 81 29 33 chr13 67995254 67995738 -52288574 - RLTR45 LTR ERVK 0 482 1 7 1103 477 0 0 0 chr13 67995936 67995989 -52288323 + (TTTA)n Simple_repeat Simple_repeat 3 55 0 8 1103 1173 70 6 12 chr13 67995989 67996149 -52288163 - B2_Mm1t SINE B2 -33 160 2 8 1103 476 214 50 106 chr13 67997156 67997297 -52287015 + RSINE1 SINE B4 11 143 -22 8 1103 216 0 0 0 chr13 67998816 67998840 -52285472 + (CAT)n Simple_repeat Simple_repeat 3 26 0 8 1103 198 0 0 0 chr13 67998991 67999013 -52285299 + (A)n Simple_repeat Simple_repeat 1 22 0 8 1103 453 245 0 11 chr13 67999142 67999237 -52285075 + B1F SINE Alu 1 94 -55 8 1103 204 62 0 59 chr13 67999420 67999454 -52284858 + (CCCCCA)n Simple_repeat Simple_repeat 1 32 0 8 1103 598 216 0 31 chr13 68000590 68000719 -52283593 - Lx9 LINE L1 -178 7466 7342 1 1103 355 269 143 6 chr13 68000736 68000897 -52283415 + Lx9 LINE L1 7462 7644 0 1 1103 1353 178 25 0 chr13 68000926 68001168 -52283144 + Lx4A LINE L1 6133 6380 -678 2 1103 2240 61 227 0 chr13 68001233 68001559 -52282753 + MTB LTR MaLR 1 400 0 3 1103 675 156 425 12 chr13 68001965 68002200 -52282112 - ORR1A4 LTR MaLR -2 392 1 4 1103 398 315 35 0 chr13 68002508 68002651 -52281661 + ORR1E LTR MaLR 1 148 -211 5 1103 658 202 0 23 chr13 68002793 68002925 -52281387 + Lx6 LINE L1 6758 6886 -574 6 1103 354 251 79 22 chr13 68002955 68003070 -52281242 + ORR1E LTR MaLR 254 366 -13 5 1103 3420 38 2 2 chr13 68003070 68003466 -52280846 + MTA_Mm LTR MaLR 1 396 0 7 1103 280 309 58 22 chr13 68003626 68003765 -52280547 + MLT1A LTR MaLR 182 325 -49 8 1103 295 173 33 100 chr13 68003794 68003884 -52280428 + Lx9 LINE L1 7561 7644 0 9 1103 264 317 0 10 chr13 68005123 68005225 -52279087 + G-rich Low_complexity Low_complexity 1 101 0 1 1103 339 182 0 0 chr13 68005299 68005376 -52278936 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 1103 1338 285 67 0 chr13 68005507 68005984 -52278328 - L1MA6 LINE L1 -175 6125 5617 1 1103 194 0 39 0 chr13 68006047 68006073 -52278239 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1103 1490 77 0 15 chr13 68006364 68006561 -52277751 + B2_Mm2 SINE B2 2 195 0 1 1103 241 227 0 0 chr13 68006984 68007028 -52277284 + polypurine Low_complexity Low_complexity 2 45 0 1 1103 854 175 6 0 chr13 68007029 68007206 -52277106 + GA-rich Low_complexity Low_complexity 3 180 0 1 1103 294 284 12 0 chr13 68007482 68007563 -52276749 + ID4 SINE ID 1 82 -1 1 1103 251 203 0 14 chr13 68007659 68007729 -52276583 + (CAT)n Simple_repeat Simple_repeat 1 69 0 1 1103 1753 247 75 12 chr13 68008024 68008582 -52275730 - Lx9 LINE L1 -1 7643 7051 1 1103 1084 89 7 0 chr13 68009204 68009350 -52274962 + B1_Mus2 SINE Alu 1 147 0 2 1103 255 103 0 0 chr13 68009352 68009391 -52274921 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1103 335 309 78 21 chr13 68010245 68010387 -52273925 + MLT1D LTR MaLR 44 193 -312 2 1103 308 215 0 15 chr13 68010396 68010462 -52273850 + L1M3e LINE L1 8 72 -6958 2 1103 2141 111 81 85 chr13 68010548 68010970 -52273342 - RLTR9B2 LTR ERVK 0 420 1 2 1103 2901 64 64 0 chr13 68013026 68013402 -52270910 - MTB LTR MaLR 0 400 1 2 1103 268 194 209 0 chr13 68015283 68015350 -52268962 + RLTR6_Mm LTR ERV1 1 81 -573 2 1103 1884 118 267 46 chr13 68015390 68015843 -52268469 + RLTR6_Mm LTR ERV1 37 589 -65 2 1103 66202 35 12 0 chr13 68015843 68023546 -52260766 + RLTR6-int LTR ERV1 1 7778 0 2 1103 1817 179 150 59 chr13 68023546 68024092 -52260220 + RLTR6_Mm LTR ERV1 1 596 -58 2 1103 878 48 32 8 chr13 68025453 68025575 -52258737 - ORR1A2 LTR MaLR -8 318 194 2 1103 3467 125 14 12 chr13 68025575 68026143 -52258169 - RLTR1D LTR ERV1 0 605 37 2 1103 1142 114 19 94 chr13 68026152 68026365 -52257947 - ORR1A2 LTR MaLR -130 197 1 2 1104 737 310 132 31 chr13 68027234 68027717 -52256595 - MER89 LTR ERV1 -5 554 23 2 1104 24 32 0 0 chr13 68028952 68028983 -52255329 + AT_rich Low_complexity Low_complexity 1 31 0 3 1104 1192 35 0 7 chr13 68029941 68030081 -52254231 + B1_Mus1 SINE Alu 1 139 -9 3 1104 351 0 0 0 chr13 68030081 68030120 -52254192 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1104 189 0 0 0 chr13 68030143 68030164 -52254148 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1104 3581 67 19 4 chr13 68030538 68031006 -52253306 - MT2C_Mm LTR ERVL 0 475 1 3 1104 810 240 179 55 chr13 68031497 68031757 -52252555 - ORR1D1 LTR MaLR -3 371 92 3 1104 1320 117 26 5 chr13 68031757 68031946 -52252366 - B2_Mm2 SINE B2 -2 193 1 3 1104 810 240 179 55 chr13 68031946 68032015 -52252297 - ORR1D1 LTR MaLR -283 91 1 3 1104 526 291 8 0 chr13 68032074 68032191 -52252121 + RSINE1 SINE B4 3 120 -45 3 1104 294 50 0 0 chr13 68032221 68032261 -52252051 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 3 1104 396 0 0 0 chr13 68032553 68032597 -52251715 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 1104 1019 80 7 0 chr13 68032597 68032734 -52251578 - B1_Mus1 SINE Alu -10 138 1 4 1104 3673 138 27 0 chr13 68033253 68033838 -52250474 + MT2B LTR ERVL 1 601 0 4 1104 2367 168 29 0 chr13 68034269 68034687 -52249625 + Lx2B LINE L1 6561 6990 -10 4 1104 804 143 275 18 chr13 68035215 68035386 -52248926 - B3 SINE B2 -1 215 1 4 1104 444 260 141 46 chr13 68035667 68035929 -52248383 + Lx9 LINE L1 7343 7629 -15 4 1104 213 213 0 0 chr13 68036634 68036681 -52247631 + G-rich Low_complexity Low_complexity 5 51 0 4 1104 204 167 0 45 chr13 68036690 68036734 -52247578 + GA-rich Low_complexity Low_complexity 1 42 0 4 1104 955 166 11 4 chr13 68036748 68037014 -52247298 + GA-rich Low_complexity Low_complexity 1 268 0 4 1104 1043 129 6 0 chr13 68037017 68037195 -52247117 + (GGA)n Simple_repeat Simple_repeat 2 180 0 4 1104 252 238 0 60 chr13 68037961 68038028 -52246284 + 5S rRNA rRNA 13 75 -46 4 1104 1980 107 3 62 chr13 68039047 68039386 -52244926 + ORR1A2 LTR MaLR 1 319 -8 4 1104 442 82 51 0 chr13 68041125 68041223 -52243089 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 5 1104 380 317 92 39 chr13 68041241 68041546 -52242766 - L1MB1 LINE L1 -18 6316 5996 5 1104 429 329 79 15 chr13 68041568 68041910 -52242402 - L1MB1 LINE L1 -285 5904 5541 5 1104 330 268 109 19 chr13 68041931 68042087 -52242225 - L1MB1 LINE L1 -745 5423 5254 5 1104 192 40 0 0 chr13 68042273 68042298 -52242014 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 5 1104 250 228 36 48 chr13 68042302 68042385 -52241927 + L1M4 LINE L1 5044 5125 -1021 5 1104 1090 139 21 1 chr13 68042551 68042759 -52241553 - ORR1A2 LTR MaLR 0 327 94 5 1104 835 128 8 0 chr13 68042763 68042896 -52241416 - ORR1A2 LTR MaLR -273 134 1 5 1104 1098 153 93 5 chr13 68043709 68043793 -52240519 - L1_Mm LINE L1 -388 5495 5404 5 1104 4311 74 34 0 chr13 68043793 68044361 -52239951 + LTRIS_Mus LTR ERV1 1 587 0 5 1104 1098 153 93 5 chr13 68044361 68044492 -52239820 - L1_Mm LINE L1 -480 5403 5262 5 1104 1399 128 53 20 chr13 68044506 68044753 -52239559 + Lx LINE L1 6398 6652 -2 5 1104 251 278 122 102 chr13 68044753 68044949 -52239363 - B4 SINE B4 -91 201 2 5 1104 256 304 89 55 chr13 68044949 68045151 -52239161 - HAL1 LINE L1 -1964 543 335 5 1104 24 0 0 0 chr13 68045329 68045353 -52238959 + AT_rich Low_complexity Low_complexity 1 24 0 6 1104 374 0 22 0 chr13 68045477 68045523 -52238789 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1104 489 266 14 0 chr13 68045523 68045666 -52238646 - Lx9 LINE L1 -157 7487 7343 6 1104 585 165 39 0 chr13 68045947 68046050 -52238262 + B3 SINE B2 1 107 -109 6 1104 26 30 0 0 chr13 68046103 68046136 -52238176 + AT_rich Low_complexity Low_complexity 1 33 0 6 1104 2490 146 29 0 chr13 68046629 68047046 -52237266 - Lx2B LINE L1 -11 6989 6561 6 1104 3892 134 8 5 chr13 68047477 68048076 -52236236 - MT2B LTR ERVL 0 601 1 6 1104 1048 95 7 0 chr13 68048598 68048745 -52235567 + B1_Mus1 SINE Alu 1 148 0 6 1104 324 150 0 0 chr13 68048748 68048828 -52235484 + (A)n Simple_repeat Simple_repeat 1 80 0 6 1104 339 44 0 0 chr13 68049115 68049160 -52235152 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1104 546 276 9 0 chr13 68049201 68049317 -52234995 - RSINE1 SINE B4 -45 120 4 7 1104 785 267 150 26 chr13 68049377 68049454 -52234858 + ORR1C2 LTR MaLR 1 90 -294 7 1104 1315 112 26 5 chr13 68049454 68049643 -52234669 + B2_Mm2 SINE B2 3 195 0 7 1104 785 267 150 26 chr13 68049643 68049904 -52234408 + ORR1C2 LTR MaLR 91 381 -3 7 1104 3599 67 19 4 chr13 68050397 68050865 -52233447 + MT2C_Mm LTR ERVL 1 475 0 7 1104 3026 33 44 0 chr13 68052212 68052575 -52231737 - L1Md_F3 LINE L1 -4 6580 6202 7 1104 715 299 53 25 chr13 68053602 68053924 -52230388 + MER89 LTR ERV1 224 554 -5 7 1104 2016 101 3 62 chr13 68054796 68055133 -52229179 + ORR1A2 LTR MaLR 1 317 -10 7 1104 442 82 51 0 chr13 68056866 68056964 -52227348 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 7 1104 380 317 92 39 chr13 68056982 68057287 -52227025 - L1MB1 LINE L1 -18 6316 5996 7 1104 423 321 82 18 chr13 68057309 68057651 -52226661 - L1MB1 LINE L1 -285 5904 5541 7 1104 330 268 109 19 chr13 68057672 68057828 -52226484 - L1MB1 LINE L1 -745 5423 5254 7 1104 250 228 36 48 chr13 68058043 68058126 -52226186 + L1M4 LINE L1 5044 5125 -1021 7 1104 1090 139 21 1 chr13 68058292 68058500 -52225812 - ORR1A2 LTR MaLR 0 327 94 8 1104 835 128 8 0 chr13 68058504 68058637 -52225675 - ORR1A2 LTR MaLR -273 134 1 8 1104 1098 153 93 5 chr13 68059452 68059536 -52224776 - L1_Mm LINE L1 -388 5495 5404 8 1104 4324 72 34 0 chr13 68059536 68060104 -52224208 + LTRIS_Mus LTR ERV1 1 587 0 8 1104 1098 153 93 5 chr13 68060104 68060235 -52224077 - L1_Mm LINE L1 -480 5403 5262 8 1104 1399 128 53 20 chr13 68060249 68060496 -52223816 + Lx LINE L1 6398 6652 -2 8 1104 251 278 122 102 chr13 68060496 68060692 -52223620 - B4 SINE B4 -91 201 2 8 1104 256 304 89 55 chr13 68060692 68060894 -52223418 - HAL1 LINE L1 -1964 543 335 8 1104 23 0 0 0 chr13 68061072 68061095 -52223217 + AT_rich Low_complexity Low_complexity 1 23 0 8 1104 482 0 17 0 chr13 68061219 68061277 -52223035 + (CA)n Simple_repeat Simple_repeat 2 60 0 8 1104 506 259 14 0 chr13 68061277 68061420 -52222892 - Lx9 LINE L1 -157 7487 7343 8 1104 585 165 39 0 chr13 68061702 68061805 -52222507 + B3 SINE B2 1 107 -109 8 1104 26 30 0 0 chr13 68061858 68061891 -52222421 + AT_rich Low_complexity Low_complexity 1 33 0 9 1104 2490 146 29 0 chr13 68062384 68062801 -52221511 - Lx2B LINE L1 -11 6989 6561 9 1104 3892 134 8 5 chr13 68063232 68063831 -52220481 - MT2B LTR ERVL 0 601 1 9 1104 1048 95 7 0 chr13 68064353 68064500 -52219812 + B1_Mus1 SINE Alu 1 148 0 9 1104 264 152 0 0 chr13 68064503 68064569 -52219743 + A-rich Low_complexity Low_complexity 1 66 0 9 1104 285 51 0 0 chr13 68064856 68064895 -52219417 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1104 546 276 9 0 chr13 68064936 68065052 -52219260 - RSINE1 SINE B4 -45 120 4 9 1104 795 267 151 21 chr13 68065112 68065189 -52219123 + ORR1C2 LTR MaLR 1 90 -294 9 1104 1307 112 27 5 chr13 68065189 68065377 -52218935 + B2_Mm2 SINE B2 3 194 -1 9 1104 795 267 151 21 chr13 68065377 68065636 -52218676 + ORR1C2 LTR MaLR 91 381 -3 9 1104 3599 67 19 4 chr13 68066129 68066597 -52217715 + MT2C_Mm LTR ERVL 1 475 0 9 1104 3026 33 44 0 chr13 68067944 68068307 -52216005 - L1Md_F3 LINE L1 -4 6580 6202 1 1104 715 299 53 25 chr13 68069334 68069656 -52214656 + MER89 LTR ERV1 224 554 -5 1 1104 2016 101 3 62 chr13 68070528 68070865 -52213447 + ORR1A2 LTR MaLR 1 317 -10 1 1104 442 82 51 0 chr13 68072597 68072695 -52211617 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 1 1104 380 317 92 39 chr13 68072713 68073018 -52211294 - L1MB1 LINE L1 -18 6316 5996 1 1104 423 321 82 18 chr13 68073040 68073382 -52210930 - L1MB1 LINE L1 -285 5904 5541 1 1104 330 268 109 19 chr13 68073403 68073559 -52210753 - L1MB1 LINE L1 -745 5423 5254 1 1104 250 228 36 48 chr13 68073774 68073857 -52210455 + L1M4 LINE L1 5044 5125 -1021 1 1104 1089 139 21 1 chr13 68074023 68074231 -52210081 - ORR1A2 LTR MaLR 0 327 94 1 1104 835 128 8 0 chr13 68074235 68074368 -52209944 - ORR1A2 LTR MaLR -273 134 1 1 1104 1079 158 93 5 chr13 68075183 68075267 -52209045 - L1_Mm LINE L1 -388 5495 5404 1 1104 4298 74 34 0 chr13 68075267 68075835 -52208477 + LTRIS_Mus LTR ERV1 1 587 0 1 1104 1079 158 93 5 chr13 68075835 68075966 -52208346 - L1_Mm LINE L1 -480 5403 5262 1 1104 1399 128 53 20 chr13 68075980 68076227 -52208085 + Lx LINE L1 6398 6652 -2 1 1104 251 278 122 102 chr13 68076227 68076423 -52207889 - B4 SINE B4 -91 201 2 1 1104 256 304 89 55 chr13 68076423 68076625 -52207687 - HAL1 LINE L1 -1964 543 335 1 1104 23 0 0 0 chr13 68076803 68076826 -52207486 + AT_rich Low_complexity Low_complexity 1 23 0 1 1104 428 0 19 0 chr13 68076950 68077002 -52207310 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1104 506 259 14 0 chr13 68077002 68077145 -52207167 - Lx9 LINE L1 -157 7487 7343 1 1104 585 165 39 0 chr13 68077427 68077530 -52206782 + B3 SINE B2 1 107 -109 1 1104 26 30 0 0 chr13 68077583 68077616 -52206696 + AT_rich Low_complexity Low_complexity 1 33 0 1 1104 2490 146 29 0 chr13 68078109 68078526 -52205786 - Lx2B LINE L1 -11 6989 6561 1 1104 3892 134 8 5 chr13 68078957 68079556 -52204756 - MT2B LTR ERVL 0 601 1 1 1104 1048 95 7 0 chr13 68080078 68080225 -52204087 + B1_Mus1 SINE Alu 1 148 0 1 1104 294 151 0 0 chr13 68080228 68080301 -52204011 + A-rich Low_complexity Low_complexity 1 73 0 1 1104 285 51 0 0 chr13 68080588 68080627 -52203685 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1104 546 276 9 0 chr13 68080668 68080784 -52203528 - RSINE1 SINE B4 -45 120 4 1 1104 795 267 151 21 chr13 68080844 68080921 -52203391 + ORR1C2 LTR MaLR 1 90 -294 1 1104 1307 112 27 5 chr13 68080921 68081109 -52203203 + B2_Mm2 SINE B2 3 194 -1 1 1104 795 267 151 21 chr13 68081109 68081368 -52202944 + ORR1C2 LTR MaLR 91 381 -3 1 1104 3599 67 19 4 chr13 68081861 68082329 -52201983 + MT2C_Mm LTR ERVL 1 475 0 1 1104 3026 33 44 0 chr13 68083676 68084039 -52200273 - L1Md_F3 LINE L1 -4 6580 6202 1 1104 715 299 53 25 chr13 68085066 68085388 -52198924 + MER89 LTR ERV1 224 554 -5 1 1104 2016 101 3 62 chr13 68086260 68086597 -52197715 + ORR1A2 LTR MaLR 1 317 -10 1 1104 442 82 51 0 chr13 68088329 68088427 -52195885 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 1 1104 493 318 189 25 chr13 68088445 68089112 -52195200 - L1MA10 LINE L1 -18 6316 5541 1 1104 330 268 109 19 chr13 68089133 68089289 -52195023 - L1MA10 LINE L1 -745 5423 5254 1 1104 192 40 0 0 chr13 68089475 68089500 -52194812 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 1 1104 250 228 36 48 chr13 68089504 68089587 -52194725 + L1M4 LINE L1 5044 5125 -1021 1 1104 1090 139 21 1 chr13 68089753 68089961 -52194351 - ORR1A2 LTR MaLR 0 327 94 1 1104 835 128 8 0 chr13 68089965 68090098 -52194214 - ORR1A2 LTR MaLR -273 134 1 1 1104 1079 145 97 9 chr13 68090912 68090996 -52193316 - L1_Mm LINE L1 -388 5495 5404 1 1104 4046 104 5 20 chr13 68090996 68091407 -52192905 + LTRIS_Mus LTR ERV1 1 410 -177 1 1104 1634 26 0 20 chr13 68091407 68091602 -52192710 + B2_Mm1a SINE B2 1 191 -2 1 1104 4046 104 5 20 chr13 68091602 68091786 -52192526 + LTRIS_Mus LTR ERV1 411 587 0 1 1104 1079 145 97 9 chr13 68091786 68091917 -52192395 - L1_Mm LINE L1 -480 5403 5262 1 1104 1343 137 51 24 chr13 68091926 68092180 -52192132 + Lx LINE L1 6393 6653 -1 1 1104 322 254 119 108 chr13 68092195 68092380 -52191932 - B4 SINE B4 -104 188 2 1 1104 530 252 76 36 chr13 68092780 68093056 -52191256 - Lx9 LINE L1 -15 7629 7343 1 1104 623 188 278 24 chr13 68093341 68093510 -52190802 + B3 SINE B2 5 216 0 1 1104 2452 155 29 0 chr13 68094036 68094455 -52189857 - Lx2B LINE L1 -10 6990 6560 1 1104 3642 159 19 0 chr13 68094880 68095470 -52188842 - MT2B LTR ERVL 0 601 1 1 1104 1971 120 14 38 chr13 68095708 68096053 -52188259 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1104 11209 109 121 26 chr13 68096053 68098187 -52186125 + IAPEz-int LTR ERVK 8 2345 -4136 1 1104 371 125 0 0 chr13 68098186 68098242 -52186070 + IAPEz-int LTR ERVK 2719 2774 -3707 1 1104 3170 20 0 0 chr13 68098240 68098597 -52185715 + IAPEz-int LTR ERVK 4001 4357 -2124 1 1104 5978 66 12 18 chr13 68098588 68099364 -52184948 + IAPEz-int LTR ERVK 5709 6479 -2 1 1104 1971 120 14 38 chr13 68099366 68099711 -52184601 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1104 1005 97 21 0 chr13 68099999 68100144 -52184168 + B1_Mus1 SINE Alu 1 148 0 1 1104 248 53 26 0 chr13 68100454 68100492 -52183820 + (TCTG)n Simple_repeat Simple_repeat 4 42 0 1 1104 523 280 8 0 chr13 68100515 68100633 -52183679 - RSINE1 SINE B4 -44 121 3 1 1104 816 259 151 33 chr13 68100692 68100763 -52183549 + ORR1D1 LTR MaLR 1 81 -293 1 1104 1179 139 21 5 chr13 68100763 68100951 -52183361 + B2_Mm2 SINE B2 3 193 -2 1 1104 816 259 151 33 chr13 68100951 68101211 -52183101 + ORR1D1 LTR MaLR 82 370 -4 1 1104 803 305 73 22 chr13 68101716 68102085 -52182227 + MER89 LTR ERV1 167 554 -5 1 1104 4171 135 18 16 chr13 68102409 68103085 -52181227 + RMER16-int LTR ERVK 763 1439 -3967 1 1104 10072 149 59 60 chr13 68103081 68106060 -52178252 + RLTR1B-int LTR ERV1 760 4271 -792 1 1104 940 210 28 5 chr13 68106065 68106280 -52178032 + RLTR1B-int LTR ERV1 4802 5021 -42 1 1104 3453 74 12 6 chr13 68106281 68106772 -52177540 + LTRIS2 LTR ERV1 1 494 -70 1 1104 36947 53 3 1 chr13 68106776 68112106 -52172206 - L1Md_F3 LINE L1 -14 6570 1231 1 1104 6655 25 3 0 chr13 68112102 68112870 -52171442 + L1Md_T LINE L1 4817 5586 -297 1 1104 8205 32 28 0 chr13 68112870 68113839 -52170473 + L1Md_T LINE L1 5587 6582 0 1 1104 423 281 290 25 chr13 68114045 68114559 -52169753 - L1MB1 LINE L1 -286 5903 5254 1 1104 327 345 71 26 chr13 68114580 68114848 -52169464 + L1M4 LINE L1 4846 5125 -1021 1 1104 1148 128 21 1 chr13 68115014 68115222 -52169090 - ORR1A2 LTR MaLR 0 327 94 1 1104 724 167 8 0 chr13 68115226 68115358 -52168954 - ORR1A2 LTR MaLR -273 134 2 1 1104 1001 132 111 5 chr13 68116204 68116262 -52168050 - L1_Mm LINE L1 -413 5470 5404 1 1104 4029 110 5 3 chr13 68116262 68116848 -52167464 + LTRIS_Mus LTR ERV1 1 587 0 1 1104 1001 132 111 5 chr13 68116848 68116979 -52167333 - L1_Mm LINE L1 -480 5403 5262 1 1104 1409 112 53 20 chr13 68116993 68117239 -52167073 + Lx LINE L1 6398 6651 -3 1 1104 273 273 122 102 chr13 68117239 68117435 -52166877 - B4 SINE B4 -91 201 2 1 1104 909 94 0 7 chr13 68117770 68117910 -52166402 - MT2C_Mm LTR ERVL -336 139 1 1 1104 658 249 51 43 chr13 68118402 68118637 -52165675 - ORR1D1 LTR MaLR -3 371 135 1 1104 231 61 0 0 chr13 68119053 68119086 -52165226 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 1 1104 909 124 7 0 chr13 68119086 68119223 -52165089 - B1_Mus1 SINE Alu -10 138 1 1 1104 3803 138 24 0 chr13 68119745 68120332 -52163980 + MT2B LTR ERVL 1 601 0 1 1104 1051 151 228 3 chr13 68120757 68121107 -52163205 + Lx2 LINE L1 6563 6991 -6 1 1104 511 230 86 14 chr13 68121621 68121798 -52162514 - B3 SINE B2 -13 182 4 1 1104 497 278 18 0 chr13 68122082 68122251 -52162061 + Lx9 LINE L1 7343 7514 -130 1 1104 318 228 0 23 chr13 68122263 68122393 -52161919 + (TA)n Simple_repeat Simple_repeat 1 127 0 1 1104 1603 319 67 63 chr13 68122420 68124755 -52159557 + RLTR45-int LTR ERVK 1517 5609 -2608 1 1104 426 288 50 25 chr13 68125238 68125398 -52158914 + RLTR45-int LTR ERVK 6195 6358 -1859 1 1104 2628 60 6 0 chr13 68125760 68126078 -52158234 + RLTR45-int LTR ERVK 1329 1648 -5596 1 1104 7460 152 17 19 chr13 68126167 68127571 -52156741 + RLTR45-int LTR ERVK 6334 7815 -402 1 1104 2182 170 32 74 chr13 68127571 68128074 -52156238 + RLTR45 LTR ERVK 1 482 0 1 1104 195 42 0 0 chr13 68128104 68128128 -52156184 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1104 246 231 37 49 chr13 68128132 68128214 -52156098 + L1M4 LINE L1 5044 5124 -1022 1 1104 1095 145 131 0 chr13 68128371 68128592 -52155720 - ORR1A4 LTR MaLR 0 329 80 1 1104 901 105 8 0 chr13 68128582 68128715 -52155597 - MTB_Mm LTR MaLR -273 134 1 1 1104 966 131 109 5 chr13 68129547 68129606 -52154706 - L1_Mm LINE L1 -413 5470 5410 1 1104 4372 96 2 0 chr13 68129606 68130192 -52154120 + LTRIS_Mus LTR ERV1 1 587 0 1 1104 966 131 109 5 chr13 68130192 68130316 -52153996 - L1_Mm LINE L1 -474 5409 5269 1 1104 1272 163 49 30 chr13 68130322 68130588 -52153724 + Lx LINE L1 6384 6654 0 1 1104 260 295 104 83 chr13 68130594 68130786 -52153526 - B4 SINE B4 -95 197 2 1 1104 28 48 0 0 chr13 68131166 68131208 -52153104 + AT_rich Low_complexity Low_complexity 1 42 0 1 1104 433 144 11 11 chr13 68131349 68131440 -52152872 + (TA)n Simple_repeat Simple_repeat 1 91 0 1 1104 1138 42 0 40 chr13 68131611 68131761 -52152551 - RLTR45-int LTR ERVK -6552 692 549 1 1104 3423 136 26 31 chr13 68132522 68133100 -52151212 - RLTR45-int LTR ERVK -6669 575 1 1 1104 1012 153 49 87 chr13 68133102 68133426 -52150886 - RLTR45 LTR ERVK -2 480 207 1 1104 1451 124 57 102 chr13 68133422 68133754 -52150558 - RLTR45 LTR ERVK -165 317 1 1 1104 377 308 278 12 chr13 68133914 68134422 -52149890 + L1MB1 LINE L1 5254 5896 -293 1 1104 404 309 101 20 chr13 68134452 68134749 -52149563 + L1MA10 LINE L1 5996 6316 -18 1 1104 561 30 0 0 chr13 68134767 68134834 -52149478 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 1 1104 2021 82 6 87 chr13 68136570 68136613 -52147699 - ORR1A2 LTR MaLR -8 319 285 1 1104 1518 68 0 16 chr13 68136613 68136807 -52147505 - B2_Mm1t SINE B2 -2 191 1 1 1104 2021 82 6 87 chr13 68136807 68137110 -52147202 - ORR1A2 LTR MaLR -43 284 1 1 1104 690 311 83 40 chr13 68137985 68138357 -52145955 - MER89 LTR ERV1 -5 554 167 1 1104 3046 82 18 4 chr13 68139338 68139791 -52144521 - MT2C_Mm LTR ERVL -16 459 1 1 1104 703 231 59 38 chr13 68140277 68140534 -52143778 - ORR1D1 LTR MaLR -3 371 91 1 1104 1178 131 27 5 chr13 68140534 68140718 -52143594 - B2_Mm2 SINE B2 -5 190 3 1 1104 510 270 140 33 chr13 68140718 68140789 -52143523 - ORR1D1 LTR MaLR -277 90 1 1 1104 536 274 8 0 chr13 68140847 68140964 -52143348 + RSINE1 SINE B4 3 120 -45 1 1104 207 125 0 0 chr13 68140992 68141032 -52143280 + (CAGA)n Simple_repeat Simple_repeat 3 42 0 1 1104 338 0 24 0 chr13 68141331 68141373 -52142939 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1104 923 131 0 0 chr13 68141373 68141510 -52142802 - B1_Mus2 SINE Alu -10 137 1 1 1104 3159 148 8 2 chr13 68142026 68142554 -52141758 + MT2B LTR ERVL 1 531 -70 1 1104 4421 89 5 2 chr13 68142555 68143140 -52141172 - LTRIS_Mus LTR ERV1 0 587 1 1 1104 6779 190 11 26 chr13 68143140 68145224 -52139088 - MuRRS-int LTR ERV1 0 4690 2525 1 1104 14313 93 5 6 chr13 68145223 68147151 -52137161 - MuRRS-int LTR ERV1 -1675 3015 1090 2 1104 380 224 40 30 chr13 68147160 68147261 -52137051 - MuRRS-int LTR ERV1 -4194 869 768 2 1104 2842 129 8 21 chr13 68147410 68148170 -52136142 - MuRRS-int LTR ERV1 -3581 1109 1 2 1104 2437 62 6 0 chr13 68148185 68148521 -52135791 - LTRIS_Mus LTR ERV1 -249 338 1 2 1104 332 202 38 0 chr13 68148523 68148602 -52135710 + L1_Mm LINE L1 5415 5496 -387 2 1104 767 110 8 0 chr13 68149407 68149525 -52134787 + MTB_Mm LTR MaLR 1 119 -288 2 1105 2389 106 20 3 chr13 68199878 68200229 -52084083 - IAPEY2_LTR LTR ERVK 0 357 1 2 1105 5541 99 6 9 chr13 68200229 68201010 -52083302 - IAPEy-int LTR ERVK 0 7513 6735 2 1105 3383 97 0 4 chr13 68200999 68201456 -52082856 - IAPEy-int LTR ERVK -1366 6215 5761 2 1105 3255 92 0 37 chr13 68201444 68201904 -52082408 - IAPEy-int LTR ERVK -1936 5645 5203 2 1105 595 100 38 57 chr13 68202158 68202264 -52082048 - IAPEy-int LTR ERVK -2911 4670 4567 2 1105 438 86 0 0 chr13 68202261 68202319 -52081993 - IAPEy-int LTR ERVK -3782 3624 3567 2 1105 586 236 393 25 chr13 68202345 68202564 -52081748 - IAPEy-int LTR ERVK -4653 2753 2454 2 1105 486 204 88 0 chr13 68202577 68202690 -52081622 - RMER16-int LTR ERVK -5077 1060 938 2 1105 1720 186 215 27 chr13 68202695 68203170 -52081142 - RMER16-int LTR ERVK -4587 819 256 2 1105 1575 55 0 0 chr13 68203262 68203464 -52080848 - L1Md_T LINE L1 0 6582 6381 2 1105 8662 26 0 0 chr13 68203466 68204498 -52079814 - L1Md_T LINE L1 0 6582 5551 2 1105 39771 33 0 0 chr13 68204498 68209721 -52074591 - L1Md_T LINE L1 -189 6393 1170 2 1105 5655 165 21 30 chr13 68209727 68210844 -52073468 - L1Md_T LINE L1 -5411 1205 99 2 1105 997 132 145 24 chr13 68210892 68211282 -52073030 - IAPEy-int LTR ERVK -6629 952 407 2 1105 2283 144 55 19 chr13 68211696 68212113 -52072199 - IAPEy-int LTR ERVK -7081 432 1 2 1105 2231 137 20 3 chr13 68212113 68212464 -52071848 - IAPEY2_LTR LTR ERVK 0 357 1 2 1105 1367 158 0 28 chr13 68212799 68213053 -52071259 + MT2B LTR ERVL 12 258 -343 2 1105 2376 146 31 2 chr13 68213167 68213586 -52070726 + Lx2 LINE L1 6561 6991 -6 2 1105 623 195 273 17 chr13 68214115 68214287 -52070025 - B3 SINE B2 0 216 1 2 1105 516 257 14 0 chr13 68214566 68214706 -52069606 + Lx9 LINE L1 7343 7484 -160 2 1105 429 116 0 0 chr13 68214707 68214776 -52069536 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 1105 23 0 0 0 chr13 68214900 68214923 -52069389 + AT_rich Low_complexity Low_complexity 1 23 0 2 1105 1306 126 57 20 chr13 68215499 68215743 -52068569 - Lx LINE L1 -4 6650 6398 2 1105 1016 177 93 5 chr13 68215757 68215888 -52068424 + L1_Mm LINE L1 5261 5402 -481 2 1105 4239 104 3 0 chr13 68215888 68216473 -52067839 - LTRIS_Mus LTR ERV1 0 587 1 2 1105 1016 177 93 5 chr13 68216473 68216557 -52067755 + L1_Mm LINE L1 5403 5494 -389 2 1105 4590 6 0 0 chr13 68217167 68217660 -52066652 - MT2_Mm LTR ERVL 0 493 1 2 1105 719 173 7 22 chr13 68217786 68217922 -52066390 + MTB LTR MaLR 1 134 -266 2 1105 1055 145 34 0 chr13 68217908 68218130 -52066182 + ORR1A2 LTR MaLR 79 329 0 2 1105 258 203 48 60 chr13 68218291 68218375 -52065937 - L1M3 LINE L1 -1020 5120 5038 2 1105 225 0 0 0 chr13 68218378 68218403 -52065909 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 2 1105 304 266 103 13 chr13 68218594 68218750 -52065562 + L1MB1 LINE L1 5254 5423 -868 2 1105 386 332 89 12 chr13 68218773 68219111 -52065201 + L1MB1 LINE L1 5541 5904 -285 2 1105 488 321 83 17 chr13 68219133 68219434 -52064878 + L1MA10 LINE L1 5996 6316 -18 2 1105 620 101 15 15 chr13 68219452 68219583 -52064729 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 2 1105 1999 107 3 62 chr13 68221453 68221792 -52062520 - ORR1A2 LTR MaLR -8 319 1 2 1105 741 285 93 35 chr13 68222662 68223029 -52061283 - MER89 LTR ERV1 -5 554 167 2 1105 3109 53 8 0 chr13 68224013 68224392 -52059920 + L1Md_F3 LINE L1 6202 6583 -1 2 1105 3452 82 19 4 chr13 68225740 68226208 -52058104 - MT2C_Mm LTR ERVL 0 475 1 2 1105 626 290 34 17 chr13 68226700 68226935 -52057377 - ORR1C2 LTR MaLR -3 381 143 2 1105 192 40 0 0 chr13 68227038 68227063 -52057249 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 2 1105 231 61 0 0 chr13 68227353 68227386 -52056926 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2 1105 866 153 0 0 chr13 68227386 68227523 -52056789 - B1_Mus2 SINE Alu -10 137 1 2 1105 2005 148 6 0 chr13 68228076 68228406 -52055906 + MT2B LTR ERVL 1 332 -269 2 1105 928 105 14 0 chr13 68228406 68228549 -52055763 + B1_Mm SINE Alu 1 145 -2 2 1105 734 227 103 52 chr13 68228408 68228640 -52055672 + MT2B LTR ERVL 167 410 -191 2 1105 262 209 209 0 chr13 68228640 68228707 -52055605 + RLTR6_Mm LTR ERV1 1 81 -573 2 1105 680 111 348 99 chr13 68228747 68228947 -52055365 + RLTR6_Mm LTR ERV1 37 286 -368 2 1105 3880 40 100 18 chr13 68228947 68229505 -52054807 + RLTR6_Mm LTR ERV1 1 604 -50 2 1105 3639 55 26 8 chr13 68229505 68230260 -52054052 + MMVL30-int LTR ERV1 21 829 -6949 2 1105 281 96 19 0 chr13 68230286 68230338 -52053974 + MMVL30-int LTR ERV1 325 377 -2922 2 1105 8614 89 46 48 chr13 68230687 68233680 -52050632 + MMVL30-int LTR ERV1 772 3698 0 2 1105 4017 35 98 18 chr13 68233680 68234253 -52050059 + RLTR6_Mm LTR ERV1 1 619 -35 2 1105 811 102 40 43 chr13 68234253 68234509 -52049803 + RLTR6_Mm LTR ERV1 283 589 -65 2 1105 62591 37 13 0 chr13 68234509 68242093 -52042219 + RLTR6-int LTR ERV1 1 7778 0 2 1105 268 194 209 0 chr13 68242093 68242160 -52042152 + RLTR6_Mm LTR ERV1 1 81 -573 2 1105 1827 123 259 34 chr13 68242200 68242647 -52041665 + RLTR6_Mm LTR ERV1 37 584 -70 2 1105 789 115 25 0 chr13 68242647 68242769 -52041543 + MT2B LTR ERVL 407 531 -70 2 1105 4250 79 33 3 chr13 68242770 68243340 -52040972 - LTRIS_Mus LTR ERV1 0 587 1 2 1105 5993 211 26 46 chr13 68243340 68245217 -52039095 - MuRRS-int LTR ERV1 -1950 5502 3819 2 1105 333 0 0 0 chr13 68245770 68245807 -52038505 + (TAGA)n Simple_repeat Simple_repeat 2 38 0 2 1105 340 327 72 23 chr13 68245816 68245951 -52038361 - L1MB1 LINE L1 -9 6325 6181 2 1105 1480 133 38 53 chr13 68245951 68246214 -52038098 + L1Md_F2 LINE L1 6321 6579 -3 2 1105 404 328 133 17 chr13 68246214 68246756 -52037556 - L1MB1 LINE L1 -154 6180 5541 2 1105 278 176 168 19 chr13 68246779 68246901 -52037411 - L1MB1 LINE L1 -877 5423 5288 2 1105 246 241 36 48 chr13 68247087 68247170 -52037142 + L1M4 LINE L1 5044 5125 -1021 2 1105 1175 111 125 5 chr13 68247336 68247544 -52036768 - ORR1A3 LTR MaLR 0 326 94 2 1105 815 128 8 0 chr13 68247548 68247681 -52036631 - ORR1A3 LTR MaLR -273 134 1 2 1105 1036 149 92 46 chr13 68248512 68248597 -52035715 - L1_Mm LINE L1 -395 5488 5411 2 1105 4229 99 5 0 chr13 68248597 68249180 -52035132 + LTRIS_Mus LTR ERV1 1 586 -1 2 1105 1036 149 92 46 chr13 68249180 68249312 -52035000 - L1_Mm LINE L1 -473 5410 5261 2 1105 1457 109 60 20 chr13 68249321 68249573 -52034739 + Lx LINE L1 6393 6654 0 2 1105 520 239 129 46 chr13 68250174 68250437 -52033875 - Lx9 LINE L1 -17 7627 7343 2 1105 659 161 279 23 chr13 68250718 68250890 -52033422 + B3 SINE B2 1 216 0 2 1105 2385 160 29 0 chr13 68251423 68251842 -52032470 - Lx2B LINE L1 -10 6990 6560 2 1105 454 123 0 0 chr13 68252272 68252345 -52031967 - MT2B2 LTR ERVL 0 584 512 2 1105 4607 77 2 2 chr13 68252345 68252932 -52031380 + LTRIS_Mus LTR ERV1 1 587 0 2 1105 1925 140 24 0 chr13 68252932 68253225 -52031087 + MuRRS-int LTR ERV1 1 300 -4390 2 1105 2866 109 4 51 chr13 68253226 68253698 -52030614 + MuRRS-int LTR ERV1 660 1109 -3581 2 1105 14683 100 6 8 chr13 68253825 68255879 -52028433 + MuRRS-int LTR ERV1 756 3015 -1675 2 1105 6339 195 28 31 chr13 68255880 68257949 -52026363 + MuRRS-int LTR ERV1 2527 4690 0 2 1105 4356 78 16 3 chr13 68257949 68258529 -52025783 + LTRIS_Mus LTR ERV1 1 587 0 2 1105 3080 154 8 2 chr13 68258530 68259058 -52025254 - MT2B LTR ERVL -70 531 1 2 1105 207 0 0 0 chr13 68259424 68259447 -52024865 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1105 504 95 0 0 chr13 68259733 68259817 -52024495 + (TG)n Simple_repeat Simple_repeat 2 85 0 2 1105 505 228 20 0 chr13 68259866 68259967 -52024345 - RSINE1 SINE B4 -45 120 18 2 1105 760 253 179 55 chr13 68260038 68260110 -52024202 + ORR1D1 LTR MaLR 1 91 -283 2 1105 1210 134 27 5 chr13 68260110 68260297 -52024015 + B2_Mm2 SINE B2 3 193 -2 2 1105 760 253 179 55 chr13 68260297 68260554 -52023758 + ORR1D1 LTR MaLR 92 371 -3 2 1105 3630 62 19 4 chr13 68261047 68261515 -52022797 + MT2C_Mm LTR ERVL 1 475 0 2 1105 3191 42 5 0 chr13 68262860 68263240 -52021072 - L1Md_F3 LINE L1 -1 6583 6202 2 1105 765 304 79 22 chr13 68264221 68264588 -52019724 + MER89 LTR ERV1 167 554 -5 2 1105 2087 94 3 54 chr13 68265460 68265796 -52018516 + ORR1A2 LTR MaLR 1 319 -8 2 1105 409 92 51 0 chr13 68267529 68267627 -52016685 + (TAGA)n Simple_repeat Simple_repeat 4 106 0 2 1105 404 327 78 39 chr13 68267645 68267954 -52016358 - L1MB1 LINE L1 -18 6316 5996 2 1105 407 324 82 18 chr13 68267976 68268318 -52015994 - L1MB1 LINE L1 -285 5904 5541 2 1105 326 273 103 13 chr13 68268339 68268495 -52015817 - L1MB1 LINE L1 -745 5423 5254 2 1105 225 312 65 35 chr13 68268559 68268788 -52015524 + L1M4 LINE L1 4890 5125 -1021 2 1105 1078 140 125 5 chr13 68268954 68269162 -52015150 - ORR1A3 LTR MaLR 0 326 94 2 1105 835 128 8 0 chr13 68269166 68269299 -52015013 - ORR1A3 LTR MaLR -273 134 1 2 1105 1037 167 92 9 chr13 68270110 68270195 -52014117 - L1_Mm LINE L1 -388 5495 5404 2 1105 4130 93 34 0 chr13 68270195 68270763 -52013549 + LTRIS_Mus LTR ERV1 1 587 0 2 1105 1037 167 92 9 chr13 68270763 68270894 -52013418 - L1_Mm LINE L1 -480 5403 5262 2 1105 1455 112 53 20 chr13 68270910 68271155 -52013157 + Lx LINE L1 6400 6652 -2 2 1105 245 284 102 56 chr13 68271350 68271566 -52012746 - HAL1 LINE L1 -1964 543 318 2 1105 440 301 62 4 chr13 68271750 68271881 -52012431 - Lx9 LINE L1 -13 7631 7487 2 1105 348 24 0 0 chr13 68271881 68271922 -52012390 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1105 440 301 62 4 chr13 68271922 68272063 -52012249 - Lx9 LINE L1 -158 7486 7344 2 1105 592 206 79 24 chr13 68272344 68272533 -52011779 + B3 SINE B2 1 185 -10 2 1105 2378 161 31 0 chr13 68273025 68273441 -52010871 - Lx2B LINE L1 -11 6989 6561 2 1105 410 127 0 14 chr13 68273872 68273944 -52010368 - MT2B2 LTR ERVL 0 584 514 2 1105 1074 82 7 0 chr13 68274332 68274479 -52009833 + B1_Mus1 SINE Alu 1 148 0 2 1105 523 274 7 75 chr13 68274803 68274949 -52009363 - RSINE1 SINE B4 -4 161 26 2 1105 729 272 155 24 chr13 68275033 68275108 -52009204 + ORR1C2 LTR MaLR 3 92 -292 2 1105 1254 119 27 5 chr13 68275108 68275293 -52009019 + B2_Mm2 SINE B2 3 191 -4 2 1105 729 272 155 24 chr13 68275293 68275552 -52008760 + ORR1C2 LTR MaLR 93 380 -4 2 1105 3559 60 19 31 chr13 68276044 68276525 -52007787 + MT2C_Mm LTR ERVL 1 475 0 2 1105 3145 47 3 0 chr13 68277869 68278250 -52006062 - L1Md_F3 LINE L1 -1 6583 6202 2 1105 768 306 79 22 chr13 68279115 68279482 -52004830 + MER89 LTR ERV1 167 554 -5 2 1105 2032 101 3 62 chr13 68280358 68280697 -52003615 + ORR1A2 LTR MaLR 1 319 -8 2 1105 358 89 56 0 chr13 68282436 68282526 -52001786 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 2 1105 424 314 93 27 chr13 68282544 68282845 -52001467 - L1MA10 LINE L1 -18 6316 5996 2 1105 387 321 79 23 chr13 68282867 68283221 -52001091 - L1MA10 LINE L1 -285 5904 5531 2 1105 394 258 102 13 chr13 68283229 68283386 -52000926 - L1MA10 LINE L1 -744 5424 5254 2 1105 312 311 73 60 chr13 68283450 68283683 -52000629 + L1M4 LINE L1 4890 5125 -1021 2 1105 1114 128 21 1 chr13 68283845 68284053 -52000259 - ORR1A2 LTR MaLR 0 327 94 2 1105 859 120 8 0 chr13 68284057 68284190 -52000122 - ORR1A2 LTR MaLR -273 134 1 2 1105 331 44 0 0 chr13 68284340 68284385 -51999927 - LTRIS_Mus LTR ERV1 -235 352 308 2 1105 21 0 0 0 chr13 68284889 68284910 -51999402 + AT_rich Low_complexity Low_complexity 1 21 0 2 1105 970 159 101 10 chr13 68285030 68285115 -51999197 - L1_Mm LINE L1 -388 5495 5404 2 1105 4153 85 35 0 chr13 68285115 68285682 -51998630 + LTRIS_Mus LTR ERV1 1 587 0 2 1105 970 159 101 10 chr13 68285682 68285805 -51998507 - L1_Mm LINE L1 -480 5403 5269 2 1105 1417 116 98 20 chr13 68285817 68286072 -51998240 + Lx LINE L1 6377 6651 -3 2 1105 259 270 41 131 chr13 68286097 68286242 -51998070 - B4 SINE B4 -118 174 43 2 1105 27 0 0 0 chr13 68286644 68286671 -51997641 + AT_rich Low_complexity Low_complexity 1 27 0 2 1105 207 0 0 0 chr13 68286795 68286818 -51997494 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1105 519 60 0 0 chr13 68286819 68286886 -51997426 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1105 452 268 16 0 chr13 68286892 68287019 -51997293 - Lx9 LINE L1 -173 7471 7343 3 1105 640 189 273 17 chr13 68287298 68287470 -51996842 + B3 SINE B2 1 216 0 3 1105 2153 162 41 0 chr13 68288003 68288417 -51995895 - Lx2B LINE L1 -10 6990 6560 3 1106 1348 152 4 27 chr13 68288535 68288792 -51995520 - MT2B LTR ERVL -347 254 4 3 1106 2337 123 20 3 chr13 68289117 68289468 -51994844 + IAPEY2_LTR LTR ERVK 1 357 0 3 1106 1940 189 48 21 chr13 68289468 68289889 -51994423 + IAPEy-int LTR ERVK 1 432 -7081 3 1106 1449 136 145 25 chr13 68290312 68290702 -51993610 + IAPEy-int LTR ERVK 407 952 -6629 3 1106 1716 187 95 27 chr13 68290822 68291294 -51993018 + RMER16-int LTR ERVK 256 819 -4587 3 1106 470 212 88 0 chr13 68291299 68291412 -51992900 + RMER16-int LTR ERVK 938 1060 -5077 3 1106 668 240 376 25 chr13 68291426 68291647 -51992665 + IAPEy-int LTR ERVK 2455 2753 -4653 3 1106 452 86 0 0 chr13 68291673 68291731 -51992581 + IAPEy-int LTR ERVK 3567 3624 -3782 3 1106 588 98 12 0 chr13 68291728 68291810 -51992502 + IAPEy-int LTR ERVK 4567 4649 -2932 3 1106 3111 117 0 29 chr13 68292088 68292544 -51991768 + IAPEy-int LTR ERVK 5203 5645 -1936 3 1106 3372 101 0 4 chr13 68292532 68292989 -51991323 + IAPEy-int LTR ERVK 5761 6215 -1366 3 1106 5480 86 29 8 chr13 68292978 68293741 -51990571 + IAPEy-int LTR ERVK 6735 7513 0 3 1106 2299 115 26 3 chr13 68293741 68294090 -51990222 + IAPEY2_LTR LTR ERVK 1 357 0 3 1106 278 0 54 0 chr13 68294745 68294782 -51989530 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1106 22 70 0 0 chr13 68295177 68295220 -51989092 + AT_rich Low_complexity Low_complexity 1 43 0 3 1106 1021 72 7 28 chr13 68295509 68295651 -51988661 + B1_Mus2 SINE Alu 2 140 -7 3 1106 183 42 0 0 chr13 68295655 68295679 -51988633 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1106 616 330 89 3 chr13 68295762 68296066 -51988246 - MTE2b LTR MaLR -19 360 31 3 1106 300 320 0 0 chr13 68297067 68297142 -51987170 - B1F1 SINE Alu -73 76 2 3 1106 675 55 0 0 chr13 68297585 68297676 -51986636 - B2_Mm2 SINE B2 -104 91 1 3 1106 1253 159 142 19 chr13 68297802 68298104 -51986208 + ORR1B1 LTR MaLR 1 346 -48 3 1106 7031 14 0 0 chr13 68298104 68298888 -51985424 - L1Md_T LINE L1 -78 5805 5022 3 1106 6287 43 0 0 chr13 68298888 68299635 -51984677 + L1Md_T LINE L1 5836 6582 0 3 1106 229 196 78 0 chr13 68299638 68299689 -51984623 + ORR1B1 LTR MaLR 312 366 -1 3 1106 1324 89 21 0 chr13 68299744 68299934 -51984378 - L1Md_F2 LINE L1 -12 6570 6377 3 1106 297 0 0 0 chr13 68300034 68300067 -51984245 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1106 271 355 90 5 chr13 68300731 68300866 -51983446 + MIR SINE MIR 8 157 -105 3 1106 2460 92 6 0 chr13 68300866 68301191 -51983121 - ORR1A2 LTR MaLR 0 327 1 3 1106 271 355 90 5 chr13 68301191 68301267 -51983045 + MIR SINE MIR 158 236 -26 3 1106 2202 57 53 9 chr13 68301397 68301717 -51982595 + ORR1A1 LTR MaLR 5 338 -8 3 1106 531 162 0 20 chr13 68303675 68303776 -51980536 + RLTR33 LTR ERVK 175 273 -405 3 1106 621 0 0 0 chr13 68303778 68303847 -51980465 + (TC)n Simple_repeat Simple_repeat 1 69 0 3 1106 442 269 245 16 chr13 68304203 68304452 -51979860 + RLTR28B LTR ERVL 1 306 -175 3 1106 1118 80 0 6 chr13 68305184 68305348 -51978964 + (TCTCC)n Simple_repeat Simple_repeat 1 163 0 3 1106 278 261 89 118 chr13 68305360 68305495 -51978817 + RMER17C LTR ERVK 246 376 -34 3 1106 187 392 10 10 chr13 68307138 68307236 -51977076 + MIRb SINE MIR 123 220 -48 3 1106 229 232 54 8 chr13 68307318 68307398 -51976914 + MIR SINE MIR 74 148 -114 3 1106 236 226 0 0 chr13 68307700 68307753 -51976559 + L1M4 LINE L1 5073 5125 -1021 3 1106 441 93 147 0 chr13 68307919 68307994 -51976318 - MTB_Mm LTR MaLR 0 327 242 3 1106 1169 122 126 5 chr13 68307984 68308199 -51976113 - ORR1A3 LTR MaLR -6 320 80 3 1106 823 135 8 0 chr13 68308189 68308322 -51975990 - MTB_Mm LTR MaLR -273 134 1 3 1106 345 190 38 0 chr13 68309127 68309206 -51975106 - L1_Mm LINE L1 -387 5496 5415 3 1106 2280 92 3 3 chr13 68309208 68309546 -51974766 + LTRIS_Mus LTR ERV1 1 338 -249 3 1106 2881 133 9 19 chr13 68309561 68310321 -51973991 + MuRRS-int LTR ERV1 1 1109 -3581 3 1106 362 224 40 30 chr13 68310470 68310571 -51973741 + MuRRS-int LTR ERV1 768 869 -4194 3 1106 14431 93 5 6 chr13 68310580 68312509 -51971803 + MuRRS-int LTR ERV1 1090 3015 -1675 3 1106 2522 263 5 5 chr13 68312508 68313135 -51971177 + MuRRS-int LTR ERV1 2525 3151 -1912 3 1106 1245 27 0 13 chr13 68313135 68313284 -51971028 + B1_Mm SINE Alu 1 147 0 3 1106 6575 157 11 18 chr13 68313446 68314788 -51969524 + MuRRS-int LTR ERV1 3239 4690 0 3 1106 960 103 14 0 chr13 68314792 68314938 -51969374 + LTRIS_Mus LTR ERV1 5 152 -435 3 1106 3185 104 10 44 chr13 68314959 68315461 -51968851 - Lx4A LINE L1 -1 7057 6573 3 1106 6845 53 5 2 chr13 68315700 68316543 -51967769 - L1Md_F2 LINE L1 0 6582 5738 3 1106 3860 82 29 0 chr13 68316543 68317102 -51967210 + LTRIS_Mus LTR ERV1 13 587 0 3 1106 3083 163 7 2 chr13 68317102 68317631 -51966681 - MT2B LTR ERVL -69 532 1 3 1106 834 161 0 0 chr13 68318146 68318283 -51966029 + B1_Mus2 SINE Alu 1 137 -10 3 1106 387 0 0 0 chr13 68318283 68318326 -51965986 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 3 1106 240 100 0 0 chr13 68318625 68318665 -51965647 + (TCTG)n Simple_repeat Simple_repeat 3 42 0 3 1106 514 291 8 0 chr13 68318693 68318810 -51965502 - RSINE1 SINE B4 -45 120 3 3 1106 828 222 152 45 chr13 68318869 68318946 -51965366 + ORR1D1 LTR MaLR 1 84 -290 3 1106 1190 141 16 0 chr13 68318946 68319130 -51965182 + B2_Mm2 SINE B2 3 189 -6 3 1106 828 222 152 45 chr13 68319130 68319387 -51964925 + ORR1D1 LTR MaLR 85 371 -3 3 1106 3088 79 18 4 chr13 68319883 68320339 -51963973 + MT2C_Mm LTR ERVL 1 462 -13 3 1106 670 314 84 32 chr13 68321317 68321686 -51962626 + MER89 LTR ERV1 167 554 -5 3 1106 1941 95 6 87 chr13 68322570 68322873 -51961439 + ORR1A2 LTR MaLR 1 279 -48 3 1106 1508 68 0 20 chr13 68322873 68323068 -51961244 + B2_Mm1t SINE B2 1 191 -2 3 1106 1941 95 6 87 chr13 68323068 68323111 -51961201 + ORR1A2 LTR MaLR 280 319 -8 3 1106 561 30 0 0 chr13 68324836 68324903 -51959409 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 3 1106 407 315 97 20 chr13 68324921 68325219 -51959093 - L1MA10 LINE L1 -18 6316 5996 3 1106 374 263 116 6 chr13 68325585 68325757 -51958555 - L1MA10 LINE L1 -724 5444 5254 3 1106 1778 142 38 241 chr13 68325918 68326520 -51957792 + RLTR45 LTR ERVK 1 480 -2 3 1106 3591 124 26 31 chr13 68326522 68327096 -51957216 + RLTR45-int LTR ERVK 1 571 -6673 3 1106 1008 39 0 45 chr13 68327861 68327995 -51956317 + RLTR45-int LTR ERVK 549 676 -6568 3 1106 1877 94 181 7 chr13 68327995 68328340 -51955972 + MT2C_Mm LTR ERVL 60 459 -16 3 1106 697 314 84 32 chr13 68329282 68329651 -51954661 + MER89 LTR ERV1 167 554 -5 3 1106 1959 89 12 84 chr13 68330526 68330826 -51953486 + ORR1A2 LTR MaLR 1 279 -48 3 1106 1535 63 0 16 chr13 68330826 68331020 -51953292 + B2_Mm1t SINE B2 1 191 -2 3 1106 1959 89 12 84 chr13 68331020 68331063 -51953249 + ORR1A2 LTR MaLR 280 319 -8 3 1106 561 30 0 0 chr13 68332802 68332869 -51951443 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 3 1106 463 320 80 10 chr13 68332887 68333187 -51951125 - L1MA10 LINE L1 -18 6316 5996 3 1106 423 289 282 16 chr13 68333217 68333725 -51950587 - L1MA10 LINE L1 -293 5896 5254 3 1106 1452 128 58 94 chr13 68333885 68334214 -51950098 + RLTR45 LTR ERVK 1 317 -165 3 1106 1019 150 49 87 chr13 68334210 68334534 -51949778 + RLTR45 LTR ERVK 207 480 -2 3 1106 3567 128 26 28 chr13 68334536 68335108 -51949204 + RLTR45-int LTR ERVK 1 571 -6673 3 1106 1116 49 0 40 chr13 68335874 68336024 -51948288 + RLTR45-int LTR ERVK 549 692 -6552 3 1106 1851 52 4 9 chr13 68336369 68336600 -51947712 + RLTR45-int LTR ERVK 681 910 -6334 3 1106 1354 109 9 0 chr13 68336761 68336971 -51947341 - ORR1A1 LTR MaLR -8 338 127 3 1106 257 65 42 42 chr13 68336971 68337019 -51947293 + RLTR45-int LTR ERVK 984 1031 -6213 3 1106 2878 318 74 50 chr13 68337306 68340334 -51943978 + RLTR45-int LTR ERVK 2224 5726 -2491 3 1106 459 273 28 28 chr13 68340718 68340861 -51943451 + RLTR45-int LTR ERVK 6195 6337 -1880 3 1106 2530 70 6 3 chr13 68341253 68341569 -51942743 + RLTR45-int LTR ERVK 1332 1648 -5596 3 1106 7379 147 20 21 chr13 68341658 68343064 -51941248 + RLTR45-int LTR ERVK 6334 7761 -456 3 1106 2129 176 32 74 chr13 68343064 68343567 -51940745 + RLTR45 LTR ERVK 1 482 0 3 1106 230 241 36 48 chr13 68343625 68343708 -51940604 + L1M4 LINE L1 5044 5125 -1021 3 1106 1095 145 131 0 chr13 68343874 68344095 -51940217 - ORR1A4 LTR MaLR 0 329 80 3 1106 881 113 8 0 chr13 68344085 68344218 -51940094 - MTB_Mm LTR MaLR -273 134 1 3 1106 1007 167 92 5 chr13 68345025 68345110 -51939202 - L1_Mm LINE L1 -387 5496 5410 3 1106 4320 92 5 0 chr13 68345110 68345694 -51938618 + LTRIS_Mus LTR ERV1 1 587 0 3 1106 1007 167 92 5 chr13 68345694 68345825 -51938487 - L1_Mm LINE L1 -474 5409 5262 3 1106 1413 120 53 20 chr13 68345839 68346086 -51938226 + Lx LINE L1 6398 6652 -2 3 1106 456 104 0 0 chr13 68346812 68346879 -51937433 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1106 346 271 25 8 chr13 68346892 68347011 -51937301 - Lx9 LINE L1 -181 7463 7343 3 1106 584 201 87 14 chr13 68347297 68347471 -51936841 + B3 SINE B2 7 182 -13 3 1106 1547 183 223 0 chr13 68347984 68348334 -51935978 - Lx2 LINE L1 -6 6991 6564 3 1106 3678 137 27 5 chr13 68348759 68349347 -51934965 - MT2B LTR ERVL 0 601 1 3 1106 872 131 7 0 chr13 68349868 68350005 -51934307 + B1_Mus1 SINE Alu 1 138 -10 3 1106 231 61 0 0 chr13 68350005 68350038 -51934274 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1106 648 112 0 0 chr13 68350570 68350668 -51933644 - ORR1A3 LTR MaLR -8 318 221 3 1106 799 276 152 15 chr13 68350824 68351081 -51933231 - ORR1C2 LTR MaLR -3 381 93 3 1106 1284 118 27 5 chr13 68351081 68351268 -51933044 - B2_Mm2 SINE B2 -2 193 3 3 1106 799 276 152 15 chr13 68351268 68351345 -51932967 - ORR1C2 LTR MaLR -292 92 1 3 1106 521 293 9 0 chr13 68351405 68351521 -51932791 + RSINE1 SINE B4 4 120 -45 3 1106 237 83 0 0 chr13 68351549 68351585 -51932727 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 3 1106 181 0 0 65 chr13 68351876 68351907 -51932405 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1106 1047 82 14 0 chr13 68351913 68352059 -51932253 - B1_Mus1 SINE Alu 0 148 1 3 1106 3953 43 45 25 chr13 68352060 68352632 -51931680 - RLTR6_Mm LTR ERV1 -70 584 1 3 1106 18973 76 22 29 chr13 68352632 68356459 -51927853 - MMVL30-int LTR ERV1 0 3698 1 3 1106 4117 43 44 24 chr13 68356459 68357052 -51927260 - RLTR6_Mm LTR ERV1 -49 605 1 3 1106 3916 132 8 3 chr13 68357577 68358175 -51926137 + MT2B LTR ERVL 1 601 0 3 1106 2430 149 31 0 chr13 68358606 68359022 -51925290 + Lx2B LINE L1 6561 6989 -11 3 1106 625 196 83 15 chr13 68359527 68359704 -51924608 - B3 SINE B2 -18 177 1 3 1106 438 258 16 0 chr13 68359979 68360103 -51924209 + Lx9 LINE L1 7341 7466 -178 3 1106 279 0 0 0 chr13 68360114 68360145 -51924167 + (TA)n Simple_repeat Simple_repeat 2 32 0 3 1106 366 23 0 0 chr13 68360145 68360187 -51924125 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1106 23 0 0 0 chr13 68360311 68360334 -51923978 + AT_rich Low_complexity Low_complexity 1 23 0 3 1106 238 337 75 40 chr13 68360512 68360713 -51923599 + HAL1 LINE L1 335 542 -1965 3 1106 323 291 58 78 chr13 68360715 68360920 -51923392 + B4 SINE B4 1 201 -91 3 1106 1412 120 53 20 chr13 68360920 68361167 -51923145 - Lx LINE L1 -2 6652 6398 3 1106 1076 154 97 9 chr13 68361181 68361311 -51923001 + L1_Mm LINE L1 5261 5402 -481 3 1106 4114 93 34 0 chr13 68361311 68361879 -51922433 - LTRIS_Mus LTR ERV1 0 587 1 3 1106 1076 154 97 9 chr13 68361879 68361964 -51922348 + L1_Mm LINE L1 5403 5494 -389 3 1106 812 135 8 0 chr13 68362771 68362904 -51921408 + ORR1A2 LTR MaLR 1 134 -273 3 1106 1079 145 21 1 chr13 68362908 68363116 -51921196 + ORR1A2 LTR MaLR 94 327 0 3 1106 250 281 0 12 chr13 68363282 68363365 -51920947 - L1M4 LINE L1 -1021 5125 5044 4 1106 228 35 0 0 chr13 68363369 68363398 -51920914 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 4 1106 344 266 103 13 chr13 68363585 68363741 -51920571 + L1MB1 LINE L1 5254 5423 -745 4 1106 406 315 91 21 chr13 68363762 68364102 -51920210 + L1MB1 LINE L1 5541 5904 -285 4 1106 408 311 81 39 chr13 68364124 68364432 -51919880 + L1MB1 LINE L1 5996 6316 -18 4 1106 778 60 37 0 chr13 68364450 68364584 -51919728 + (TCTA)n Simple_repeat Simple_repeat 4 142 0 4 1106 2021 98 3 62 chr13 68366312 68366649 -51917663 - ORR1A2 LTR MaLR -10 317 1 4 1106 711 309 79 22 chr13 68367521 68367888 -51916424 - MER89 LTR ERV1 -5 554 167 4 1106 3271 29 5 0 chr13 68368792 68369171 -51915141 + L1Md_F3 LINE L1 6202 6582 -2 4 1106 3551 73 19 4 chr13 68370511 68370979 -51913333 - MT2C_Mm LTR ERVL 0 475 1 4 1106 641 287 39 17 chr13 68371471 68371705 -51912607 - ORR1C2 LTR MaLR -3 381 143 4 1106 3277 96 164 12 chr13 68371748 68372316 -51911996 - RLTR6_Mm LTR ERV1 0 654 1 4 1106 17077 61 21 23 chr13 68372316 68374684 -51909628 - MMVL30-int LTR ERV1 0 3698 960 4 1106 5979 39 1 7 chr13 68374757 68375458 -51908854 - MMVL30-int LTR ERV1 -2230 1468 772 4 1106 3936 28 27 14 chr13 68375884 68376654 -51907658 - MMVL30-int LTR ERV1 -6949 829 1 4 1106 388 73 0 0 chr13 68376654 68376709 -51907603 - RLTR6_Mm LTR ERV1 -15 639 585 4 1106 3253 95 165 12 chr13 68376709 68377273 -51907039 - RLTR6_Mm LTR ERV1 0 654 5 4 1106 1130 149 0 6 chr13 68377273 68377448 -51906864 - B2_Mm2 SINE B2 -19 176 3 4 1106 243 222 0 0 chr13 68377480 68377525 -51906787 - ORR1C2 LTR MaLR -333 45 1 4 1106 520 213 11 0 chr13 68377607 68377701 -51906611 + RSINE1 SINE B4 26 120 -45 4 1106 201 94 0 0 chr13 68377729 68377761 -51906551 + (CAGA)n Simple_repeat Simple_repeat 3 34 0 4 1106 184 72 23 45 chr13 68378048 68378092 -51906220 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 4 1106 1059 95 7 0 chr13 68378096 68378243 -51906069 - B1_Mus1 SINE Alu 0 148 1 4 1106 4003 128 8 3 chr13 68378764 68379362 -51904950 + MT2B LTR ERVL 1 601 0 4 1106 2451 151 29 0 chr13 68379793 68380210 -51904102 + Lx2B LINE L1 6561 6989 -11 4 1106 633 201 275 12 chr13 68380719 68380890 -51903422 - B3 SINE B2 0 216 1 4 1106 563 261 19 110 chr13 68381171 68381489 -51902823 + Lx9 LINE L1 7343 7631 -13 4 1106 1294 151 53 20 chr13 68382083 68382327 -51901985 - Lx LINE L1 -5 6649 6398 4 1106 952 191 93 5 chr13 68382341 68382472 -51901840 + L1_Mm LINE L1 5261 5402 -481 4 1106 3873 112 24 0 chr13 68382472 68383045 -51901267 - LTRIS_Mus LTR ERV1 0 587 1 4 1106 952 191 93 5 chr13 68383045 68383129 -51901183 + L1_Mm LINE L1 5403 5494 -389 4 1106 762 142 8 0 chr13 68383936 68384063 -51900249 + ORR1A2 LTR MaLR 1 128 -279 4 1106 1053 146 27 1 chr13 68384073 68384280 -51900032 + ORR1A2 LTR MaLR 94 327 0 4 1106 232 279 164 56 chr13 68384442 68384533 -51899779 - L1M4 LINE L1 -1021 5125 5040 4 1106 192 40 0 0 chr13 68384533 68384558 -51899754 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 4 1106 232 279 164 56 chr13 68384558 68384679 -51899633 - L1M4 LINE L1 -1107 5039 4890 4 1106 348 273 103 13 chr13 68384743 68384899 -51899413 + L1MB1 LINE L1 5254 5423 -745 4 1106 404 332 71 14 chr13 68384908 68385262 -51899050 + L1MB1 LINE L1 5531 5904 -285 4 1106 319 323 100 33 chr13 68385284 68385585 -51898727 + L1MA10 LINE L1 5996 6316 -18 4 1106 462 89 54 0 chr13 68385603 68385715 -51898597 + (TCTA)n Simple_repeat Simple_repeat 1 118 0 4 1106 1895 119 3 62 chr13 68387458 68387797 -51896515 - ORR1A2 LTR MaLR -8 319 1 4 1106 753 304 79 22 chr13 68388670 68389037 -51895275 - MER89 LTR ERV1 -5 554 167 4 1106 3275 29 8 0 chr13 68390019 68390399 -51893913 + L1Md_F3 LINE L1 6202 6584 0 4 1106 3538 69 21 4 chr13 68391743 68392210 -51892102 - MT2C_Mm LTR ERVL 0 475 1 4 1106 702 252 188 61 chr13 68392703 68392960 -51891352 - ORR1D1 LTR MaLR -3 371 92 4 1106 1319 108 21 5 chr13 68392960 68393146 -51891166 - B2_Mm2 SINE B2 -4 191 3 4 1106 702 252 188 61 chr13 68393146 68393217 -51891095 - ORR1D1 LTR MaLR -283 91 1 4 1106 472 222 40 0 chr13 68393288 68393387 -51890925 + RSINE1 SINE B4 18 120 -45 4 1106 444 86 0 0 chr13 68393436 68393506 -51890806 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1106 207 0 0 0 chr13 68393792 68393815 -51890497 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 1106 3086 154 8 4 chr13 68394183 68394712 -51889600 + MT2B LTR ERVL 1 531 -70 4 1106 4209 89 19 5 chr13 68394713 68395292 -51889020 - LTRIS_Mus LTR ERV1 0 587 1 4 1106 6517 200 11 28 chr13 68395292 68397379 -51886933 - MuRRS-int LTR ERV1 0 4690 2527 4 1106 14582 89 4 7 chr13 68397380 68399318 -51884994 - MuRRS-int LTR ERV1 -1675 3015 1084 4 1106 2802 125 2 45 chr13 68399561 68400031 -51884281 - MuRRS-int LTR ERV1 -3581 1109 660 4 1106 1907 140 24 0 chr13 68400032 68400325 -51883987 - MuRRS-int LTR ERV1 -4390 300 1 4 1106 4591 78 2 2 chr13 68400325 68400912 -51883400 - LTRIS_Mus LTR ERV1 0 587 1 4 1106 454 123 0 0 chr13 68400912 68400985 -51883327 + MT2B2 LTR ERVL 512 584 0 4 1106 2340 167 29 0 chr13 68401415 68401834 -51882478 + Lx2 LINE L1 6561 6991 -6 4 1106 648 161 279 23 chr13 68402368 68402540 -51881772 - B3 SINE B2 0 216 1 4 1106 502 247 119 37 chr13 68402815 68403084 -51881228 + Lx9 LINE L1 7337 7627 -17 4 1106 291 273 120 104 chr13 68403487 68403679 -51880633 + B4 SINE B4 3 197 -95 4 1106 1454 110 60 20 chr13 68403688 68403939 -51880373 - Lx LINE L1 -1 6653 6393 4 1106 1037 149 93 33 chr13 68403948 68404080 -51880232 + L1_Mm LINE L1 5261 5410 -473 4 1106 4224 104 3 0 chr13 68404080 68404664 -51879648 - LTRIS_Mus LTR ERV1 -1 586 1 4 1106 1037 149 93 33 chr13 68404664 68404746 -51879566 + L1_Mm LINE L1 5411 5488 -395 4 1106 341 306 0 53 chr13 68405175 68405327 -51878985 + MuRRS-int LTR ERV1 742 885 -4178 4 1106 8844 105 4 9 chr13 68405331 68406574 -51877738 + MuRRS-int LTR ERV1 1110 2346 -2344 4 1106 648 38 0 0 chr13 68407707 68407786 -51876526 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 4 1106 474 309 90 23 chr13 68407804 68408105 -51876207 - L1MA10 LINE L1 -18 6316 5996 4 1106 440 303 280 12 chr13 68408135 68408642 -51875670 - L1MA10 LINE L1 -293 5896 5254 4 1106 1783 140 36 246 chr13 68408802 68409409 -51874903 + RLTR45 LTR ERVK 1 480 -2 4 1106 3331 135 52 20 chr13 68409411 68409664 -51874648 + RLTR45-int LTR ERVK 1 268 -6976 4 1106 189 0 0 0 chr13 68409664 68409685 -51874627 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 4 1106 3331 135 52 20 chr13 68409685 68409984 -51874328 + RLTR45-int LTR ERVK 269 570 -6674 4 1106 1127 42 0 40 chr13 68410751 68410901 -51873411 + RLTR45-int LTR ERVK 549 692 -6552 4 1106 1701 57 5 0 chr13 68411246 68411456 -51872856 + RLTR45-int LTR ERVK 681 891 -6353 4 1106 1374 86 14 0 chr13 68411623 68411832 -51872480 - ORR1A1 LTR MaLR -8 338 127 4 1106 3054 321 71 50 chr13 68412274 68415092 -51869220 + RNERVK23-int LTR ERVK 2732 5609 -2608 4 1106 420 295 50 25 chr13 68415575 68415735 -51868577 + RNERVK23-int LTR ERVK 6195 6358 -1859 4 1106 2650 57 6 0 chr13 68416097 68416415 -51867897 + RLTR45-int LTR ERVK 1329 1648 -5596 4 1106 4796 178 21 21 chr13 68416504 68417577 -51866735 + RLTR45-int LTR ERVK 6334 7761 -456 4 1106 3031 96 2 2 chr13 68417577 68418036 -51866276 + LTRIS_Mus LTR ERV1 129 587 0 4 1106 733 141 86 0 chr13 68418038 68418166 -51866146 - L1_Mm LINE L1 -483 5400 5262 4 1106 1366 148 49 23 chr13 68418166 68418429 -51865883 + Lx LINE L1 6384 6653 -1 4 1106 247 279 125 104 chr13 68418438 68418630 -51865682 - B4 SINE B4 -95 197 2 4 1106 27 49 0 0 chr13 68419010 68419051 -51865261 + AT_rich Low_complexity Low_complexity 1 41 0 4 1106 348 83 0 0 chr13 68419155 68419203 -51865109 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1106 298 310 10 0 chr13 68419216 68419316 -51864996 - Lx9 LINE L1 -181 7463 7363 4 1107 514 226 87 14 chr13 68419622 68419796 -51864516 + B3 SINE B2 7 182 -13 4 1107 628 240 58 0 chr13 68420311 68420482 -51863830 - Lx2 LINE L1 -6 6991 6811 4 1107 198 128 0 0 chr13 68421053 68421092 -51863220 + (A)n Simple_repeat Simple_repeat 1 39 0 4 1107 733 160 8 0 chr13 68421318 68421449 -51862863 + ORR1A2 LTR MaLR 3 134 -273 4 1107 1118 134 21 1 chr13 68421453 68421661 -51862651 + ORR1A2 LTR MaLR 94 327 0 4 1107 231 241 36 48 chr13 68421827 68421910 -51862402 - L1M4 LINE L1 -1021 5125 5044 4 1107 387 279 292 27 chr13 68422116 68422630 -51861682 + L1MB1 LINE L1 5254 5903 -286 4 1107 374 345 14 0 chr13 68422652 68422800 -51861512 + L1MB1 LINE L1 5996 6145 -44 4 1107 9449 27 0 0 chr13 68422836 68424601 -51859711 - L1Md_T LINE L1 0 6582 4817 4 1107 34416 54 3 1 chr13 68424597 68428944 -51855368 + L1Md_F3 LINE L1 1231 5586 -297 4 1107 7896 45 8 5 chr13 68428946 68429925 -51854387 + L1Md_F3 LINE L1 5589 6570 -14 4 1107 3444 76 12 6 chr13 68429929 68430420 -51853892 - LTRIS2 LTR ERV1 -70 494 1 4 1107 897 218 50 5 chr13 68430421 68430642 -51853670 - RLTR1B-int LTR ERV1 -42 5021 4791 4 1107 10051 135 47 72 chr13 68430641 68433005 -51851307 - RLTR1B-int LTR ERV1 -792 4271 1161 4 1107 1484 206 122 12 chr13 68433027 68433594 -51850718 - RLTR1B-int LTR ERV1 -3675 1388 760 4 1107 4096 139 19 16 chr13 68433590 68434265 -51850047 - RMER16-int LTR ERVK -3967 1439 763 4 1107 803 308 73 22 chr13 68434589 68434958 -51849354 - MER89 LTR ERV1 -5 554 167 4 1107 2793 102 165 16 chr13 68434972 68435529 -51848783 + RLTR6_Mm LTR ERV1 1 640 -14 4 1107 4409 58 6 6 chr13 68435529 68436320 -51847992 + RLTR6-int LTR ERV1 1 829 -6949 4 1107 281 96 19 0 chr13 68436346 68436398 -51847914 + MMVL30-int LTR ERV1 325 377 -2922 4 1107 8628 41 66 7 chr13 68436738 68439503 -51844809 + MMVL30-int LTR ERV1 772 3698 0 4 1107 2659 104 172 15 chr13 68439503 68440038 -51844274 + RLTR6_Mm LTR ERV1 1 619 -35 4 1107 722 248 47 38 chr13 68440533 68440768 -51843544 - ORR1D1 LTR MaLR -3 371 135 4 1107 1271 118 21 5 chr13 68440793 68440981 -51843331 - B2_Mm2 SINE B2 -2 193 3 4 1107 781 92 0 0 chr13 68441007 68441116 -51843196 - B2_Mm2 SINE B2 -84 111 3 4 1107 242 179 0 0 chr13 68441148 68441187 -51843125 - ORR1D1 LTR MaLR -328 39 1 4 1107 525 282 8 0 chr13 68441246 68441363 -51842949 + RSINE1 SINE B4 3 120 -45 4 1107 251 71 24 0 chr13 68441387 68441429 -51842883 + (CAGA)n Simple_repeat Simple_repeat 4 46 0 4 1107 1037 109 7 0 chr13 68441741 68441888 -51842424 - B1_Mus1 SINE Alu 0 148 1 4 1107 3543 171 19 0 chr13 68442408 68442998 -51841314 + MT2B LTR ERVL 1 601 0 4 1107 2413 151 34 0 chr13 68443423 68443840 -51840472 + Lx2B LINE L1 6560 6990 -10 4 1107 633 182 278 24 chr13 68444366 68444535 -51839777 - B3 SINE B2 0 216 5 4 1107 362 264 66 0 chr13 68444820 68444941 -51839371 + Lx9 LINE L1 7343 7471 -173 4 1107 606 63 0 0 chr13 68444947 68445026 -51839286 + (TA)n Simple_repeat Simple_repeat 2 80 0 4 1107 239 273 119 108 chr13 68445550 68445735 -51838577 + B4 SINE B4 2 188 -104 4 1107 1402 116 52 24 chr13 68445752 68446000 -51838312 - Lx LINE L1 -2 6652 6398 4 1107 973 164 97 14 chr13 68446014 68446145 -51838167 + L1_Mm LINE L1 5261 5402 -481 4 1107 3987 107 24 0 chr13 68446145 68446718 -51837594 - LTRIS_Mus LTR ERV1 0 587 1 4 1107 973 164 97 14 chr13 68446718 68446803 -51837509 + L1_Mm LINE L1 5403 5494 -389 4 1107 867 120 8 0 chr13 68447610 68447743 -51836569 + MTB_Mm LTR MaLR 1 134 -273 4 1107 1136 126 126 5 chr13 68447733 68447948 -51836364 + ORR1A3 LTR MaLR 80 320 -6 4 1107 556 128 0 0 chr13 68447938 68448024 -51836288 + MTB_Mm LTR MaLR 242 327 0 4 1107 289 274 83 48 chr13 68448188 68448460 -51835852 - L1M3 LINE L1 -1021 5125 4846 4 1107 276 246 127 35 chr13 68448481 68448654 -51835658 + L1M2 LINE L1 5254 5442 -858 4 1107 350 341 79 12 chr13 68448658 68448999 -51835313 + L1MB1 LINE L1 5541 5904 -264 4 1107 353 308 107 33 chr13 68449021 68449320 -51834992 + L1MA10 LINE L1 5996 6316 -18 4 1107 1379 44 0 5 chr13 68449338 68449545 -51834767 + (TCTA)n Simple_repeat Simple_repeat 1 206 0 4 1107 3382 114 25 23 chr13 68451310 68451832 -51832480 + Lx LINE L1 6115 6637 -17 4 1107 184 167 20 20 chr13 68454234 68454283 -51830029 + GA-rich Low_complexity Low_complexity 3 51 0 5 1107 363 198 17 8 chr13 68454347 68454441 -51829871 + GA-rich Low_complexity Low_complexity 3 96 0 5 1107 981 150 0 0 chr13 68454441 68454621 -51829691 + (GGA)n Simple_repeat Simple_repeat 1 180 0 5 1107 363 198 17 8 chr13 68454621 68454643 -51829669 + polypurine Low_complexity Low_complexity 97 119 0 5 1107 795 156 11 11 chr13 68454646 68454821 -51829491 + GA-rich Low_complexity Low_complexity 1 175 0 5 1107 253 293 0 51 chr13 68455581 68455660 -51828652 + 5S rRNA rRNA 13 87 -34 5 1107 1129 109 5 47 chr13 68455819 68456011 -51828301 - ETnERV3-int LTR ERVK -5622 186 3 5 1107 5364 98 45 2 chr13 68456013 68456841 -51827471 - RLTR13B1 LTR ERVK 0 893 31 5 1107 264 209 63 0 chr13 68457518 68457593 -51826719 - MIR SINE MIR -104 164 81 5 1107 34548 11 0 8 chr13 68458559 68463259 -51821053 - L1Md_A LINE L1 -763 5120 462 5 1107 692 166 273 17 chr13 68463476 68463648 -51820664 - B3 SINE B2 0 216 1 5 1107 361 281 23 0 chr13 68463930 68464058 -51820254 + Lx9 LINE L1 7343 7473 -171 5 1107 387 105 0 0 chr13 68464063 68464120 -51820192 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1107 24 0 0 0 chr13 68464233 68464257 -51820055 + AT_rich Low_complexity Low_complexity 1 24 0 5 1107 242 277 119 104 chr13 68464638 68464831 -51819481 + B4 SINE B4 2 197 -95 5 1107 792 116 89 13 chr13 68464834 68464991 -51819321 - Lx LINE L1 -4 6650 6482 5 1107 2201 27 114 0 chr13 68464991 68465253 -51819059 + RLTR10B LTR ERVK 1 292 0 5 1107 1960 75 12 0 chr13 68465253 68465508 -51818804 + MMERVK10C-int LTR ERVK 1 258 -7323 5 1107 235 222 0 0 chr13 68465510 68465555 -51818757 + RLTR27 LTR ERVK 231 275 -34 5 1107 359 21 106 0 chr13 68465555 68465602 -51818710 + MMERVK10C-int LTR ERVK 225 276 -7305 5 1107 938 86 23 0 chr13 68465588 68465716 -51818596 + MMERVK10C-int LTR ERVK 5436 5566 -2015 5 1107 1825 85 0 0 chr13 68465716 68465951 -51818361 + MMERVK10C-int LTR ERVK 7347 7581 0 5 1107 2175 27 114 0 chr13 68465951 68466213 -51818099 + RLTR10B LTR ERVK 1 292 0 5 1107 628 106 0 44 chr13 68466213 68466319 -51817993 - Lx LINE L1 -167 6487 6398 5 1107 1036 168 93 5 chr13 68466321 68466452 -51817860 + L1_Mm LINE L1 5261 5402 -481 5 1107 4295 93 9 0 chr13 68466452 68467034 -51817278 - LTRIS_Mus LTR ERV1 0 587 1 5 1107 1036 168 93 5 chr13 68467034 68467118 -51817194 + L1_Mm LINE L1 5403 5494 -389 5 1107 570 219 275 12 chr13 68468234 68468405 -51815907 - B3 SINE B2 0 216 1 5 1107 414 308 45 45 chr13 68468686 68468814 -51815498 + Lx9 LINE L1 7343 7477 -167 5 1107 468 91 0 0 chr13 68468814 68468880 -51815432 + (TA)n Simple_repeat Simple_repeat 2 67 0 5 1107 414 308 45 45 chr13 68468880 68469040 -51815272 + Lx9 LINE L1 7478 7630 -14 5 1107 1312 146 53 20 chr13 68469635 68469879 -51814433 - Lx LINE L1 -5 6649 6398 5 1107 951 195 93 5 chr13 68469893 68470024 -51814288 + L1_Mm LINE L1 5261 5402 -481 5 1107 3947 108 23 0 chr13 68470024 68470598 -51813714 - LTRIS_Mus LTR ERV1 0 587 1 5 1107 951 195 93 5 chr13 68470598 68470682 -51813630 + L1_Mm LINE L1 5403 5494 -389 5 1107 778 150 8 0 chr13 68471490 68471623 -51812689 + ORR1A2 LTR MaLR 1 134 -273 5 1107 1064 141 27 1 chr13 68471627 68471834 -51812478 + ORR1A2 LTR MaLR 94 327 0 5 1107 195 69 0 0 chr13 68472082 68472111 -51812201 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 5 1107 363 273 103 13 chr13 68472297 68472453 -51811859 + L1MB1 LINE L1 5254 5423 -745 5 1107 420 327 73 6 chr13 68472474 68472815 -51811497 + L1MB1 LINE L1 5541 5904 -285 5 1107 379 331 83 17 chr13 68472837 68473138 -51811174 + L1MA10 LINE L1 5996 6316 -18 5 1107 508 107 41 0 chr13 68473156 68473277 -51811035 + (TCTA)n Simple_repeat Simple_repeat 1 126 0 5 1107 2057 94 3 62 chr13 68475021 68475360 -51808952 - ORR1A2 LTR MaLR -8 319 1 5 1107 751 302 82 22 chr13 68476233 68476599 -51807713 - MER89 LTR ERV1 -5 554 167 5 1107 3270 29 8 0 chr13 68477509 68477889 -51806423 + L1Md_F3 LINE L1 6202 6584 0 5 1107 3631 62 19 4 chr13 68479233 68479701 -51804611 - MT2C_Mm LTR ERVL 0 475 1 5 1107 722 257 167 60 chr13 68480194 68480451 -51803861 - ORR1D1 LTR MaLR -3 371 92 5 1107 1281 118 27 5 chr13 68480451 68480638 -51803674 - B2_Mm2 SINE B2 -2 193 3 5 1107 722 257 167 60 chr13 68480638 68480715 -51803597 - ORR1D1 LTR MaLR -283 91 1 5 1107 553 274 8 0 chr13 68480775 68480892 -51803420 + RSINE1 SINE B4 4 121 -44 5 1107 249 33 0 0 chr13 68480919 68480949 -51803363 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 5 1107 202 68 22 43 chr13 68481246 68481292 -51803020 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1107 970 110 14 0 chr13 68481296 68481442 -51802870 - B1_Mus1 SINE Alu 0 148 1 5 1107 3899 136 8 3 chr13 68481961 68482559 -51801753 + MT2B LTR ERVL 1 601 0 5 1107 2134 107 242 27 chr13 68482839 68483290 -51801022 + RLTR6_Mm LTR ERV1 37 584 -70 5 1107 2422 147 36 0 chr13 68483554 68483968 -51800344 + Lx2B LINE L1 6561 6989 -11 5 1107 26 30 0 0 chr13 68484461 68484494 -51799818 + AT_rich Low_complexity Low_complexity 1 33 0 5 1107 621 146 39 0 chr13 68484547 68484650 -51799662 - B3 SINE B2 -109 107 1 5 1107 452 268 16 0 chr13 68484931 68485058 -51799254 + Lx9 LINE L1 7343 7471 -173 5 1107 510 17 0 0 chr13 68485064 68485123 -51799189 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1107 366 23 0 0 chr13 68485123 68485165 -51799147 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1107 22 0 0 0 chr13 68485288 68485310 -51799002 + AT_rich Low_complexity Low_complexity 1 22 0 5 1107 229 284 102 56 chr13 68485474 68485690 -51798622 + HAL1 LINE L1 318 543 -1964 5 1107 237 278 122 102 chr13 68485690 68485886 -51798426 + B4 SINE B4 2 201 -91 5 1107 1411 124 53 20 chr13 68485886 68486133 -51798179 - Lx LINE L1 -2 6652 6398 5 1107 1027 164 98 5 chr13 68486147 68486277 -51798035 + L1_Mm LINE L1 5261 5402 -481 5 1107 4226 84 34 0 chr13 68486277 68486845 -51797467 - LTRIS_Mus LTR ERV1 0 587 1 5 1107 1027 164 98 5 chr13 68486845 68486929 -51797383 + L1_Mm LINE L1 5403 5494 -389 5 1107 835 128 8 0 chr13 68487739 68487872 -51796440 + ORR1A2 LTR MaLR 1 134 -273 5 1107 1089 139 21 1 chr13 68487876 68488084 -51796228 + ORR1A2 LTR MaLR 94 327 0 5 1107 249 247 32 53 chr13 68488250 68488337 -51795975 - L1M4 LINE L1 -1021 5125 5040 5 1107 264 30 0 0 chr13 68488337 68488370 -51795942 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 5 1107 318 313 272 17 chr13 68488556 68489075 -51795237 + L1MA10 LINE L1 5254 5904 -408 5 1107 347 309 98 49 chr13 68489097 68489403 -51794909 + L1MA10 LINE L1 5996 6316 -18 5 1107 294 29 0 0 chr13 68489421 68489456 -51794856 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 5 1107 206 47 93 0 chr13 68489468 68489511 -51794801 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 5 1107 2031 104 3 62 chr13 68491242 68491581 -51792731 - ORR1A2 LTR MaLR -8 319 1 5 1107 686 310 82 22 chr13 68492452 68492818 -51791494 - MER89 LTR ERV1 -5 554 167 5 1107 3176 45 3 0 chr13 68493800 68494181 -51790131 + L1Md_F3 LINE L1 6202 6583 -1 5 1107 3634 62 19 4 chr13 68495524 68495992 -51788320 - MT2C_Mm LTR ERVL 0 475 1 5 1107 722 254 167 60 chr13 68496485 68496742 -51787570 - ORR1D1 LTR MaLR -3 371 92 5 1107 1192 139 21 5 chr13 68496742 68496930 -51787382 - B2_Mm2 SINE B2 -2 193 3 5 1107 722 254 167 60 chr13 68496930 68497007 -51787305 - ORR1D1 LTR MaLR -283 91 1 5 1107 546 276 9 0 chr13 68497067 68497183 -51787129 + RSINE1 SINE B4 4 120 -45 5 1107 360 59 0 0 chr13 68497206 68497257 -51787055 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1107 203 171 0 0 chr13 68497545 68497586 -51786726 + T-rich Low_complexity Low_complexity 1 41 0 5 1107 1056 89 7 0 chr13 68497587 68497733 -51786579 - B1_Mus1 SINE Alu -1 147 1 5 1107 1899 161 144 84 chr13 68498136 68498692 -51785620 + RLTR6_Mm LTR ERV1 1 589 -65 5 1107 10196 53 40 0 chr13 68498692 68500000 -51784312 + RLTR6-int LTR ERV1 1 1345 -6433 5 1107 55449 35 7 0 chr13 68500000 68506390 -51777922 + RLTR6-int LTR ERV1 1346 7778 0 1 1107 241 194 206 15 chr13 68506390 68506458 -51777854 + RLTR6_Mm LTR ERV1 1 81 -573 1 1107 1827 143 244 53 chr13 68506498 68506970 -51777342 + RLTR6_Mm LTR ERV1 37 598 -56 1 1107 314 235 86 29 chr13 68506954 68507059 -51777253 - ORR1D1 LTR MaLR -129 245 135 2 1107 1186 139 27 5 chr13 68507084 68507272 -51777040 - B2_Mm2 SINE B2 -1 194 3 3 1107 228 179 0 0 chr13 68507310 68507349 -51776963 - ORR1D1 LTR MaLR -328 39 1 2 1107 487 226 11 0 chr13 68507432 68507525 -51776787 + RSINE1 SINE B4 27 120 -45 4 1107 276 102 0 0 chr13 68507556 68507605 -51776707 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1107 193 29 0 56 chr13 68507891 68507927 -51776385 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1107 1097 75 7 0 chr13 68507932 68508079 -51776233 - B1_Mus1 SINE Alu 0 148 1 7 1107 3886 134 8 3 chr13 68508602 68509200 -51775112 + MT2B LTR ERVL 1 601 0 8 1107 1640 136 19 0 chr13 68509630 68509887 -51774425 + Lx2B LINE L1 6560 6821 -179 9 1107 454 272 75 35 chr13 68510082 68510337 -51773975 + RMER17C LTR ERVK 112 376 -34 1 1107 324 0 0 0 chr13 68511761 68511797 -51772515 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1107 262 266 62 21 chr13 68512172 68512268 -51772044 + MIRc SINE MIR 65 164 -104 1 1107 5961 104 49 2 chr13 68512935 68513788 -51770524 + RLTR13B1 LTR ERVK 1 893 0 1 1107 1200 104 5 42 chr13 68513790 68513981 -51770331 + ETnERV3-int LTR ERVK 3 186 -5622 1 1107 903 137 17 0 chr13 68514992 68515167 -51769145 + CT-rich Low_complexity Low_complexity 3 180 0 1 1107 1000 126 11 0 chr13 68515192 68515366 -51768946 + (TCC)n Simple_repeat Simple_repeat 3 178 0 1 1107 606 211 0 0 chr13 68515373 68515442 -51768870 + polypyrimidine Low_complexity Low_complexity 86 154 0 1 1107 1078 112 0 11 chr13 68515442 68515622 -51768690 + (TCC)n Simple_repeat Simple_repeat 3 180 0 1 1107 606 211 0 0 chr13 68515622 68515704 -51768608 + polypyrimidine Low_complexity Low_complexity 4 85 0 1 1107 302 267 18 45 chr13 68515715 68515825 -51768487 + CT-rich Low_complexity Low_complexity 6 112 0 1 1107 3408 110 27 27 chr13 68518212 68518735 -51765577 - Lx LINE L1 -17 6637 6115 2 1107 624 33 33 0 chr13 68520515 68520606 -51763706 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 2 1107 358 330 90 17 chr13 68520611 68520910 -51763402 - L1MB1 LINE L1 -18 6316 5996 2 1107 449 330 73 6 chr13 68520932 68521273 -51763039 - L1MB1 LINE L1 -285 5904 5541 2 1107 246 249 115 29 chr13 68521277 68521451 -51762861 - L1M2 LINE L1 -858 5442 5254 2 1107 323 309 77 48 chr13 68521472 68521744 -51762568 + L1M4 LINE L1 4846 5125 -1021 2 1107 533 139 0 0 chr13 68521909 68521995 -51762317 - MTB_Mm LTR MaLR 0 327 242 2 1107 1157 122 126 5 chr13 68521985 68522200 -51762112 - ORR1A3 LTR MaLR -6 320 80 2 1107 867 120 8 0 chr13 68522190 68522323 -51761989 - MTB_Mm LTR MaLR -273 134 1 2 1107 371 212 0 12 chr13 68523129 68523210 -51761102 - L1_Mm LINE L1 -388 5495 5416 2 1107 3445 97 8 11 chr13 68523213 68523747 -51760565 + LTRIS_Mus LTR ERV1 1 532 -55 2 1107 1349 109 60 40 chr13 68523802 68524051 -51760261 + Lx LINE L1 6398 6651 -3 2 1107 314 244 120 109 chr13 68524066 68524250 -51760062 - B4 SINE B4 -104 188 3 3 1107 372 94 0 0 chr13 68524774 68524827 -51759485 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1107 315 273 66 0 chr13 68524833 68524954 -51759358 - Lx9 LINE L1 -173 7471 7343 3 1107 633 161 298 36 chr13 68525239 68525407 -51758905 + B3 SINE B2 5 216 0 3 1107 2149 189 34 0 chr13 68525933 68526350 -51757962 - Lx2 LINE L1 -6 6991 6561 3 1107 3568 166 19 0 chr13 68526775 68527365 -51756947 - MT2B LTR ERVL 0 601 1 3 1107 1016 102 7 7 chr13 68527888 68528036 -51756276 + B1_Mus1 SINE Alu 1 148 0 3 1107 216 0 0 0 chr13 68528041 68528065 -51756247 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1107 236 120 20 0 chr13 68528355 68528405 -51755907 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 3 1107 487 252 10 0 chr13 68528429 68528528 -51755784 - RSINE1 SINE B4 -45 120 21 3 1107 257 128 0 0 chr13 68528605 68528644 -51755668 + ORR1C2 LTR MaLR 1 39 -328 4 1107 754 111 0 0 chr13 68528677 68528785 -51755527 + B2_Mm2 SINE B2 4 111 -84 4 1107 1270 118 21 5 chr13 68528811 68528999 -51755313 + B2_Mm2 SINE B2 3 193 -2 4 1107 700 273 34 17 chr13 68529024 68529259 -51755053 + ORR1C2 LTR MaLR 143 381 -3 4 1107 764 310 73 22 chr13 68529763 68530132 -51754180 + MER89 LTR ERV1 167 554 -5 4 1107 3872 149 18 17 chr13 68530460 68531117 -51753195 + RMER16-int LTR ERVK 763 1420 -3986 4 1107 10018 151 65 62 chr13 68531121 68534088 -51750224 + RLTR1B-int LTR ERV1 760 4271 -792 4 1107 899 218 50 5 chr13 68534087 68534308 -51750004 + RLTR1B-int LTR ERV1 4791 5021 -42 4 1107 3421 78 12 6 chr13 68534309 68534800 -51749512 + LTRIS2 LTR ERV1 1 494 -70 4 1107 37423 66 3 1 chr13 68534803 68540945 -51743367 - L1Md_F3 LINE L1 -14 6570 459 4 1107 580 76 43 0 chr13 68540956 68541048 -51743264 + LTRIS2 LTR ERV1 469 564 0 4 1107 671 0 13 0 chr13 68542296 68542375 -51741937 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 4 1107 256 200 18 0 chr13 68542388 68542443 -51741869 - L1MA10 LINE L1 -13 6321 6266 4 1107 462 284 288 23 chr13 68542712 68543226 -51741086 - L1MB1 LINE L1 -286 5903 5254 5 1107 225 0 0 0 chr13 68543413 68543438 -51740874 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 5 1107 234 228 36 48 chr13 68543438 68543521 -51740791 + L1M4 LINE L1 5044 5125 -1021 5 1107 1172 140 117 5 chr13 68543687 68543909 -51740403 - ORR1A3 LTR MaLR 0 326 80 5 1107 743 159 8 0 chr13 68543899 68544031 -51740281 - MTB_Mm LTR MaLR -273 134 2 5 1107 1070 154 96 5 chr13 68544859 68544936 -51739376 - L1_Mm LINE L1 -395 5488 5404 5 1107 3996 107 9 3 chr13 68544936 68545520 -51738792 + LTRIS_Mus LTR ERV1 1 587 0 5 1107 1070 154 96 5 chr13 68545520 68545651 -51738661 - L1_Mm LINE L1 -480 5403 5262 5 1107 1316 140 52 20 chr13 68545665 68545913 -51738399 + Lx LINE L1 6398 6653 -1 5 1107 288 273 122 102 chr13 68545913 68546109 -51738203 - B4 SINE B4 -91 201 2 5 1107 1040 73 0 7 chr13 68546418 68546570 -51737742 - MT2C_Mm LTR ERVL -324 151 1 5 1107 757 251 34 17 chr13 68547062 68547297 -51737015 - ORR1C2 LTR MaLR -3 381 143 6 1107 243 61 0 0 chr13 68547711 68547744 -51736568 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 6 1107 911 124 7 0 chr13 68547744 68547881 -51736431 - B1_Mus1 SINE Alu -10 138 1 6 1107 3795 131 24 3 chr13 68548403 68548992 -51735320 + MT2B LTR ERVL 1 601 0 6 1107 1624 171 223 0 chr13 68549417 68549767 -51734545 + Lx2 LINE L1 6564 6991 -6 6 1107 520 271 52 23 chr13 68550281 68550455 -51733857 - B2_Mm2 SINE B2 -13 182 4 6 1108 453 262 82 39 chr13 68550738 68551020 -51733292 + Lx9 LINE L1 7343 7636 -8 6 1108 1394 144 49 23 chr13 68551618 68551881 -51732431 - Lx LINE L1 -1 6653 6384 6 1108 942 191 93 0 chr13 68551881 68552011 -51732301 + L1_Mm LINE L1 5262 5408 -475 6 1108 4281 99 3 0 chr13 68552011 68552596 -51731716 - LTRIS_Mus LTR ERV1 0 587 1 6 1108 942 191 93 0 chr13 68552596 68552680 -51731632 + L1_Mm LINE L1 5409 5495 -388 6 1108 232 136 167 0 chr13 68552771 68552837 -51731475 - L1MEc LINE L1 -4487 1913 1837 7 1108 881 113 8 0 chr13 68553485 68553618 -51730694 + MTB_Mm LTR MaLR 1 134 -273 7 1108 1076 154 131 0 chr13 68553608 68553829 -51730483 + ORR1A4 LTR MaLR 80 329 0 7 1108 239 231 37 49 chr13 68553986 68554068 -51730244 - L1M4 LINE L1 -1022 5124 5044 7 1108 195 42 0 0 chr13 68554072 68554096 -51730216 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 7 1108 2163 166 34 75 chr13 68554126 68554629 -51729683 - RLTR45 LTR ERVK 0 482 1 7 1108 7578 150 16 19 chr13 68554629 68556039 -51728273 - RLTR45-int LTR ERVK -456 7761 6334 7 1108 2551 70 6 0 chr13 68556128 68556443 -51727869 - RLTR45-int LTR ERVK -5596 1648 1332 7 1108 458 280 50 25 chr13 68556813 68556974 -51727338 - RNERVK23-int LTR ERVK -1858 6359 6195 7 1108 1790 319 71 57 chr13 68557359 68559688 -51724624 - RNERVK23-int LTR ERVK -2491 5726 1534 7 1108 41937 7 0 0 chr13 68559705 68566280 -51718032 - L1Md_A LINE L1 0 6582 7 7 1108 864 336 47 42 chr13 68566280 68567000 -51717312 - RNERVK23-int LTR ERVK -3220 2947 2224 7 1108 1322 105 9 0 chr13 68567332 68567542 -51716770 + ORR1A1 LTR MaLR 127 338 -8 7 1108 1871 57 4 0 chr13 68567703 68567932 -51716380 - RLTR45-int LTR ERVK -6334 910 681 7 1108 1138 42 0 40 chr13 68568277 68568427 -51715885 - RLTR45-int LTR ERVK -6552 692 549 7 1108 3549 129 26 28 chr13 68569193 68569765 -51714547 - RLTR45-int LTR ERVK -6673 571 1 7 1108 1019 150 49 87 chr13 68569767 68570091 -51714221 - RLTR45 LTR ERVK -2 480 207 7 1108 1452 128 58 94 chr13 68570087 68570416 -51713896 - RLTR45 LTR ERVK -165 317 1 8 1108 434 293 280 14 chr13 68570576 68571084 -51713228 + L1MB1 LINE L1 5254 5896 -293 8 1108 459 320 80 10 chr13 68571114 68571414 -51712898 + L1MA10 LINE L1 5996 6316 -18 8 1108 561 30 0 0 chr13 68571432 68571499 -51712813 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 8 1108 1959 89 12 84 chr13 68573238 68573281 -51711031 - ORR1A2 LTR MaLR -8 319 280 8 1108 1535 63 0 16 chr13 68573281 68573475 -51710837 - B2_Mm1t SINE B2 -2 191 1 8 1108 1959 89 12 84 chr13 68573475 68573775 -51710537 - ORR1A2 LTR MaLR -48 279 1 8 1108 697 314 84 32 chr13 68574650 68575019 -51709293 - MER89 LTR ERV1 -5 554 167 8 1108 2343 86 148 5 chr13 68575961 68576360 -51707952 - MT2C_Mm LTR ERVL -16 459 4 8 1108 708 231 51 39 chr13 68576859 68577093 -51707219 - ORR1D1 LTR MaLR -3 371 135 8 1108 1163 144 26 5 chr13 68577110 68577299 -51707013 - B2_Mm2 SINE B2 0 195 3 8 1108 524 282 8 0 chr13 68577428 68577545 -51706767 + RSINE1 SINE B4 3 120 -45 9 1108 204 111 0 0 chr13 68577573 68577609 -51706703 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 9 1108 743 0 11 0 chr13 68577909 68577996 -51706316 + (TTTTG)n Simple_repeat Simple_repeat 2 89 0 9 1108 865 147 7 0 chr13 68577996 68578132 -51706180 - B1_Mus2 SINE Alu -10 137 1 9 1108 3173 146 8 2 chr13 68578649 68579177 -51705135 + MT2B LTR ERVL 1 531 -70 9 1108 4373 91 5 2 chr13 68579178 68579763 -51704549 - LTRIS_Mus LTR ERV1 0 587 1 9 1108 6643 126 7 19 chr13 68579763 68580870 -51703442 - MuRRS-int LTR ERV1 0 4690 3474 9 1108 2164 91 216 64 chr13 68580871 68581352 -51702960 - RLTR6_Mm LTR ERV1 -70 584 31 9 1108 57335 30 23 1 chr13 68581425 68589033 -51695279 - RLTR6-int LTR ERV1 0 7778 1 9 1108 2298 91 212 55 chr13 68589034 68589525 -51694787 - RLTR6_Mm LTR ERV1 -50 604 37 9 1108 2653 258 11 11 chr13 68589935 68590586 -51693726 - MuRRS-int LTR ERV1 -1886 3177 2527 9 1108 14402 93 5 6 chr13 68590587 68592515 -51691797 - MuRRS-int LTR ERV1 -1675 3015 1090 9 1108 390 254 0 41 chr13 68592502 68592625 -51691687 - MuRRS-int LTR ERV1 -4178 885 768 9 1108 2833 136 9 22 chr13 68592774 68593534 -51690778 - MuRRS-int LTR ERV1 -3581 1109 1 9 1108 2421 68 3 0 chr13 68593549 68593886 -51690426 - LTRIS_Mus LTR ERV1 -249 338 1 1 1108 323 205 39 0 chr13 68593888 68593966 -51690346 + L1_Mm LINE L1 5415 5495 -388 1 1108 8526 33 1 1 chr13 68594237 68595785 -51688527 - L1Md_T LINE L1 0 6582 5060 1 1108 863 120 8 0 chr13 68596282 68596415 -51687897 + ORR1A3 LTR MaLR 1 134 -273 1 1108 1090 108 138 5 chr13 68596419 68596615 -51687697 + ORR1A3 LTR MaLR 94 315 -11 1 1108 347 174 0 55 chr13 68596610 68596657 -51687655 + ORR1A2 LTR MaLR 242 288 -39 1 1108 2365 36 0 0 chr13 68596657 68596935 -51687377 + L1Md_A LINE L1 6305 6582 0 1 1108 347 174 0 55 chr13 68596935 68596978 -51687334 + ORR1A2 LTR MaLR 289 327 0 1 1108 211 286 83 8 chr13 68597446 68597584 -51686728 - MIR SINE MIR -51 217 68 1 1108 549 0 0 0 chr13 68597957 68598018 -51686294 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1108 365 260 52 103 chr13 68599452 68599684 -51684628 - RMER17C LTR ERVK -34 376 157 1 1108 437 287 241 12 chr13 68600227 68600635 -51683677 - RLTR28B LTR ERVL -26 498 3 1 1108 522 0 0 0 chr13 68600996 68601054 -51683258 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1108 557 152 0 20 chr13 68601055 68601156 -51683156 - RLTR33 LTR ERVK -405 273 175 1 1108 2488 56 3 9 chr13 68603117 68603457 -51680855 - ORR1A1 LTR MaLR -8 338 1 1 1108 302 344 89 5 chr13 68603582 68603659 -51680653 - MIR SINE MIR -24 238 159 1 1108 2555 83 3 0 chr13 68603659 68603985 -51680327 + ORR1A2 LTR MaLR 1 327 0 1 1108 302 344 89 5 chr13 68603985 68604120 -51680192 - MIR SINE MIR -104 158 9 1 1108 1349 74 21 0 chr13 68604902 68605092 -51679220 + L1Md_F2 LINE L1 6377 6570 -12 1 1108 1484 157 133 16 chr13 68605148 68605487 -51678825 - ORR1B1 LTR MaLR -1 393 1 1 1108 699 33 0 0 chr13 68605613 68605704 -51678608 + B2_Mm2 SINE B2 1 91 -104 1 1108 335 276 0 0 chr13 68606147 68606223 -51678089 + B1F1 SINE Alu 2 77 -72 1 1108 728 320 75 6 chr13 68607201 68607519 -51676793 + MTE2b LTR MaLR 21 360 -19 1 1108 1090 69 7 27 chr13 68607624 68607773 -51676539 - B1_Mus2 SINE Alu 0 147 2 1 1108 22 70 0 0 chr13 68608062 68608105 -51676207 + AT_rich Low_complexity Low_complexity 1 43 0 1 1108 2265 121 26 3 chr13 68609180 68609529 -51674783 - IAPEY2_LTR LTR ERVK 0 357 1 1 1108 5568 96 6 8 chr13 68609529 68610305 -51674007 - IAPEy-int LTR ERVK 0 7513 6739 1 1108 3362 99 0 7 chr13 68610298 68610756 -51673556 - IAPEy-int LTR ERVK -1366 6215 5761 1 1108 3209 102 0 29 chr13 68610744 68611200 -51673112 - IAPEy-int LTR ERVK -1936 5645 5203 1 1108 607 100 38 57 chr13 68611454 68611560 -51672752 - IAPEy-int LTR ERVK -2911 4670 4567 1 1108 416 121 0 0 chr13 68611557 68611615 -51672697 - IAPEy-int LTR ERVK -3782 3624 3567 1 1108 647 238 374 25 chr13 68611641 68611863 -51672449 - IAPEy-int LTR ERVK -4653 2753 2454 1 1108 1207 212 110 32 chr13 68611964 68612413 -51671899 - IAPEy-int LTR ERVK -4899 507 256 1 1108 1011 137 145 24 chr13 68612534 68612924 -51671388 - IAPEY3-int LTR ERVK -6629 952 407 1 1108 1665 183 34 17 chr13 68613349 68613742 -51670570 - IAPEY3-int LTR ERVK -7081 432 1 1 1108 2184 131 21 3 chr13 68613742 68614079 -51670233 - IAPEY2_LTR LTR ERVK 0 357 15 1 1108 1459 146 8 27 chr13 68614403 68614663 -51669649 + MT2B LTR ERVL 4 258 -343 1 1108 2537 153 29 0 chr13 68614777 68615196 -51669116 + Lx2B LINE L1 6560 6990 -10 1 1108 750 178 273 17 chr13 68615727 68615899 -51668413 - B3 SINE B2 0 216 1 1 1108 341 254 49 33 chr13 68616179 68616301 -51668011 + Lx9 LINE L1 7343 7466 -178 1 1108 231 114 0 0 chr13 68616312 68616347 -51667965 + (TA)n Simple_repeat Simple_repeat 2 36 0 1 1108 303 274 128 103 chr13 68616863 68617058 -51667254 + B4 SINE B4 2 201 -91 1 1108 1471 121 57 25 chr13 68617058 68617303 -51667009 - Lx LINE L1 -4 6650 6398 1 1108 953 191 93 5 chr13 68617317 68617448 -51666864 + L1_Mm LINE L1 5261 5402 -481 1 1108 4379 108 7 0 chr13 68617448 68618031 -51666281 - LTRIS_Mus LTR ERV1 0 587 1 1 1108 953 191 93 5 chr13 68618031 68618115 -51666197 + L1_Mm LINE L1 5403 5494 -389 1 1108 611 199 39 4 chr13 68619281 68619399 -51664913 - B3 SINE B2 -76 119 1 1 1108 472 272 75 46 chr13 68619680 68619829 -51664483 + Lx9 LINE L1 7343 7497 -147 1 1108 183 80 0 0 chr13 68619829 68619854 -51664458 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1108 472 272 75 46 chr13 68619854 68619985 -51664327 + Lx9 LINE L1 7498 7630 -14 1 1108 364 261 122 102 chr13 68620370 68620566 -51663746 + B4 SINE B4 2 201 -91 1 1108 1508 126 53 20 chr13 68620567 68620811 -51663501 - Lx LINE L1 -5 6649 6398 1 1108 1028 132 103 21 chr13 68620825 68620956 -51663356 + L1_Mm LINE L1 5261 5402 -481 1 1108 4281 103 23 0 chr13 68620956 68621530 -51662782 - LTRIS_Mus LTR ERV1 0 587 1 1 1108 1028 132 103 21 chr13 68621530 68621592 -51662720 + L1_Mm LINE L1 5403 5469 -414 1 1108 893 120 8 0 chr13 68622426 68622559 -51661753 + MTB_Mm LTR MaLR 1 134 -273 1 1108 1115 168 117 5 chr13 68622549 68622771 -51661541 + ORR1A3 LTR MaLR 80 326 0 1 1108 237 241 36 48 chr13 68622937 68623020 -51661292 - L1M4 LINE L1 -1021 5125 5044 1 1108 225 0 0 0 chr13 68623022 68623047 -51661265 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1 1108 392 277 96 13 chr13 68623232 68623389 -51660923 + L1MB1 LINE L1 5254 5423 -745 1 1108 417 322 76 12 chr13 68623410 68623752 -51660560 + L1MB1 LINE L1 5541 5904 -285 1 1108 449 330 84 17 chr13 68623779 68624075 -51660237 + L1MA10 LINE L1 6001 6316 -18 1 1108 370 89 56 0 chr13 68624093 68624183 -51660129 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 1 1108 2154 104 3 62 chr13 68625920 68626259 -51658053 - ORR1A2 LTR MaLR -8 319 1 1 1108 839 320 79 22 chr13 68627135 68627502 -51656810 - MER89 LTR ERV1 -5 554 167 1 1108 3304 47 3 0 chr13 68628365 68628747 -51655565 + L1Md_F3 LINE L1 6202 6584 0 1 1108 3801 64 19 4 chr13 68630090 68630558 -51653754 - MT2C_Mm LTR ERVL 0 475 1 1 1108 883 267 151 21 chr13 68631050 68631309 -51653003 - ORR1C2 LTR MaLR -3 381 91 1 1108 1319 120 22 5 chr13 68631309 68631493 -51652819 - B2_Mm2 SINE B2 -6 189 3 1 1108 883 267 151 21 chr13 68631493 68631570 -51652742 - ORR1C2 LTR MaLR -294 90 1 1 1108 538 302 9 0 chr13 68631630 68631746 -51652566 + RSINE1 SINE B4 4 120 -45 1 1108 210 105 0 0 chr13 68631776 68631814 -51652498 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 1 1108 201 24 71 24 chr13 68632099 68632141 -51652171 + (TTTTG)n Simple_repeat Simple_repeat 4 47 0 1 1108 1102 102 7 0 chr13 68632141 68632288 -51652024 - B1_Mus1 SINE Alu 0 148 1 1 1108 4230 129 8 2 chr13 68632810 68633407 -51650905 + MT2B LTR ERVL 1 601 0 1 1108 2664 144 29 0 chr13 68633838 68634255 -51650057 + Lx2B LINE L1 6561 6989 -11 1 1108 696 183 273 17 chr13 68634765 68634937 -51649375 - B3 SINE B2 0 216 1 1 1108 505 262 82 61 chr13 68635218 68635369 -51648943 + Lx9 LINE L1 7343 7495 -149 1 1108 477 0 0 0 chr13 68635369 68635422 -51648890 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1108 505 262 82 61 chr13 68635422 68635550 -51648762 + Lx9 LINE L1 7496 7627 -17 1 1108 261 289 102 56 chr13 68635733 68635949 -51648363 + HAL1 LINE L1 318 543 -1964 1 1108 369 258 128 110 chr13 68635949 68636145 -51648167 + B4 SINE B4 2 201 -91 1 1108 1562 112 98 20 chr13 68636145 68636400 -51647912 - Lx LINE L1 -3 6651 6377 1 1108 369 258 128 110 chr13 68636400 68636421 -51647891 + B4 SINE B4 202 223 -69 1 1108 931 162 106 5 chr13 68636421 68636535 -51647777 + L1_Mm LINE L1 5277 5402 -481 1 1108 4415 88 34 0 chr13 68636535 68637103 -51647209 - LTRIS_Mus LTR ERV1 0 587 1 1 1108 931 162 106 5 chr13 68637103 68637187 -51647125 + L1_Mm LINE L1 5403 5494 -389 1 1108 910 120 8 0 chr13 68637994 68638127 -51646185 + MTB_Mm LTR MaLR 1 134 -273 1 1108 1090 163 131 0 chr13 68638117 68638338 -51645974 + ORR1A4 LTR MaLR 80 329 0 1 1108 334 340 76 42 chr13 68638504 68638768 -51645544 - L1M4 LINE L1 -1021 5125 4853 1 1108 313 243 126 34 chr13 68638795 68638970 -51645342 + L1M2 LINE L1 5254 5444 -856 1 1108 437 325 70 9 chr13 68638972 68639314 -51644998 + L1MB1 LINE L1 5541 5903 -286 1 1108 386 344 25 0 chr13 68639336 68639499 -51644813 + L1MB1 LINE L1 5996 6162 -6 1 1108 760 20 20 0 chr13 68639651 68639749 -51644563 + (TCTA)n Simple_repeat Simple_repeat 3 102 0 1 1108 611 76 43 0 chr13 68640995 68641087 -51643225 - LTRIS2 LTR ERV1 0 564 469 1 1108 36020 58 3 1 chr13 68641098 68646257 -51638055 + L1Md_A LINE L1 459 5586 -297 1 1108 8611 38 16 1 chr13 68646259 68647237 -51637075 + L1Md_A LINE L1 5589 6581 -1 1 1108 207 0 0 0 chr13 68647970 68647993 -51636319 + (TA)n Simple_repeat Simple_repeat 1 23 0 1 1108 2748 326 32 46 chr13 68647997 68649291 -51635021 + Lx8 LINE L1 6198 7472 -1 1 1108 3639 48 13 44 chr13 68649972 68650428 -51633884 - L1_Mus2 LINE L1 0 6566 6125 1 1108 14393 43 1 6 chr13 68651881 68653635 -51630677 + L1Md_F3 LINE L1 3394 5138 -745 1 1108 35925 50 1 4 chr13 68653632 68659073 -51625239 + L1Md_Gf LINE L1 67 5589 -297 1 1108 9597 4 0 0 chr13 68659073 68660069 -51624243 + L1Md_A LINE L1 5587 6582 0 1 1108 7271 38 21 0 chr13 68660069 68660896 -51623416 + L1Md_T LINE L1 5739 6582 0 1 1108 35925 46 1 1 chr13 68660896 68660926 -51623386 + L1Md_Gf LINE L1 5590 5617 -269 1 1108 3577 66 0 0 chr13 68660926 68661366 -51622946 + L1Md_F3 LINE L1 5147 5586 -297 1 1108 8500 38 12 0 chr13 68661367 68662337 -51621975 + L1Md_F3 LINE L1 5588 6569 -15 1 1108 3478 81 25 12 chr13 68662342 68662830 -51621482 - LTRIS2 LTR ERV1 -70 494 1 1 1108 913 214 50 5 chr13 68662831 68663052 -51621260 - RLTR1B-int LTR ERV1 -42 5021 4791 1 1108 7859 144 45 31 chr13 68663051 68666048 -51618264 - RLTR1B-int LTR ERV1 -792 4271 760 1 1108 4226 133 19 20 chr13 68666039 68666722 -51617590 - RMER16-int LTR ERVK -3962 1444 763 1 1108 566 283 77 10 chr13 68667209 68667416 -51616896 - MER89 LTR ERV1 -172 387 167 1 1108 21 0 0 0 chr13 68668136 68668157 -51616155 + AT_rich Low_complexity Low_complexity 1 21 0 1 1108 831 121 8 0 chr13 68668380 68668512 -51615800 + ORR1A3 LTR MaLR 1 133 -274 1 1108 1126 126 125 5 chr13 68668517 68668725 -51615587 + ORR1A3 LTR MaLR 94 326 0 1 1108 304 311 36 89 chr13 68668892 68669139 -51615173 - L1M4 LINE L1 -1023 5123 4890 1 1108 1281 148 188 10 chr13 68669228 68669521 -51614791 - IAPLTR4 LTR ERVK 0 345 1 1 1108 6198 264 52 38 chr13 68669521 68672025 -51612287 - IAPLTR3-int LTR ERVK -351 7329 5064 1 1108 704 150 39 8 chr13 68672160 68672288 -51612024 - IAPLTR3-int LTR ERVK -2920 4661 4530 1 1108 521 176 13 33 chr13 68672300 68672437 -51611875 - IAPLTR3-int LTR ERVK -2380 2464 2357 1 1108 6279 113 100 4 chr13 68672467 68673757 -51610555 - ETnERV3-int LTR ERVK -3198 4208 2735 1 1108 470 212 88 0 chr13 68673862 68673975 -51610337 - RMER16-int LTR ERVK -5077 1060 938 1 1108 1380 199 107 43 chr13 68674102 68674448 -51609864 - RMER16-int LTR ERVK -4783 623 256 1 1108 5745 96 15 18 chr13 68674568 68675431 -51608881 - IAPLTR4_I LTR ERVK -6629 952 1 1 1108 231 332 89 18 chr13 68675508 68675842 -51608470 + L1MA10 LINE L1 5541 5896 -416 1 1108 309 308 106 45 chr13 68675883 68676044 -51608268 + L1MA10 LINE L1 6007 6179 -155 1 1108 1411 123 39 55 chr13 68676044 68676301 -51608011 - L1Md_F2 LINE L1 -3 6579 6327 1 1108 309 308 106 45 chr13 68676301 68676431 -51607881 + L1MA10 LINE L1 6180 6316 -18 1 1108 666 58 0 0 chr13 68676448 68676535 -51607777 + (TCTA)n Simple_repeat Simple_repeat 4 90 0 1 1108 1993 99 18 63 chr13 68678263 68678597 -51605715 - ORR1A2 LTR MaLR -8 319 1 1 1108 3415 76 30 4 chr13 68680445 68680908 -51603404 - MT2C_Mm LTR ERVL 0 475 1 1 1108 837 252 162 30 chr13 68681406 68681664 -51602648 - ORR1D1 LTR MaLR -3 371 93 1 138 1365 105 21 5 chr13 68681664 68681855 -51602457 - B2_Mm2 SINE B2 -1 194 1 1 1109 837 252 162 30 chr13 68681855 68681924 -51602388 - ORR1D1 LTR MaLR -282 92 2 1 1109 539 282 8 0 chr13 68681983 68682100 -51602212 + RSINE1 SINE B4 3 120 -45 2 1109 198 71 0 0 chr13 68682130 68682158 -51602154 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 2 1109 693 0 0 0 chr13 68682450 68682527 -51601785 + (TTTTG)n Simple_repeat Simple_repeat 2 78 0 2 1109 948 104 8 0 chr13 68682529 68682663 -51601649 - B1_Mus1 SINE Alu -13 135 1 2 1109 270 0 0 0 chr13 68683010 68683040 -51601272 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 2 1109 506 304 91 28 chr13 68683240 68683592 -51600720 + L1MB1 LINE L1 5530 5903 -286 2 1109 413 321 76 27 chr13 68683616 68683764 -51600548 + L1MA10 LINE L1 6001 6148 -186 2 1109 4378 14 0 0 chr13 68683764 68684246 -51600066 - LTRIS_Mm LTR ERV1 0 482 1 2 1109 413 321 76 27 chr13 68684246 68684398 -51599914 + L1MA10 LINE L1 6149 6316 -18 2 1109 474 18 0 0 chr13 68684416 68684471 -51599841 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2 1109 27 73 0 0 chr13 68684976 68685031 -51599281 + AT_rich Low_complexity Low_complexity 1 55 0 2 1109 3322 47 4 148 chr13 68685676 68686231 -51598081 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1109 3470 104 25 21 chr13 68686495 68687013 -51597299 + Lx LINE L1 6115 6634 -20 2 1109 255 103 0 0 chr13 68687015 68687054 -51597258 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 1109 195 222 0 0 chr13 68689441 68689486 -51594826 + G-rich Low_complexity Low_complexity 2 46 0 2 1109 200 343 0 14 chr13 68689495 68689566 -51594746 + GA-rich Low_complexity Low_complexity 1 70 0 2 1109 940 136 6 6 chr13 68689570 68689747 -51594565 + (GGA)n Simple_repeat Simple_repeat 2 178 0 2 1109 890 162 7 3 chr13 68689755 68690057 -51594255 + GA-rich Low_complexity Low_complexity 1 302 0 2 1109 435 185 17 8 chr13 68690050 68690105 -51594207 + polypurine Low_complexity Low_complexity 6 60 0 2 1109 1000 128 6 6 chr13 68690105 68690285 -51594027 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2 1109 435 185 17 8 chr13 68690285 68690349 -51593963 + polypurine Low_complexity Low_complexity 61 125 0 2 1109 262 293 0 51 chr13 68691109 68691188 -51593124 + 5S rRNA rRNA 13 87 -34 2 1109 234 234 55 8 chr13 68691866 68691957 -51592355 - MIR SINE MIR -104 164 74 2 1109 197 381 10 10 chr13 68692039 68692137 -51592175 - MIRb SINE MIR -48 220 123 2 1109 603 0 0 0 chr13 68692338 68692405 -51591907 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1109 414 272 78 47 chr13 68693843 68694020 -51590292 - RMER17C LTR ERVK -34 376 192 2 1109 960 9 0 0 chr13 68694020 68694129 -51590183 + (GGAGA)n Simple_repeat Simple_repeat 3 111 0 2 1109 414 272 78 47 chr13 68694129 68694144 -51590168 - RMER17C LTR ERVK -219 191 178 2 1109 365 286 223 7 chr13 68694685 68695041 -51589271 - RLTR28B LTR ERVL -26 498 76 2 1109 214 130 43 0 chr13 68695195 68695241 -51589071 + (TCTA)n Simple_repeat Simple_repeat 4 51 0 2 1109 844 227 41 5 chr13 68695243 68695438 -51588874 - B3 SINE B2 -14 202 1 2 1109 2924 49 0 0 chr13 68695563 68695909 -51588403 - ORR1A1 LTR MaLR 0 346 1 2 1109 262 355 90 5 chr13 68696035 68696111 -51588201 - MIR SINE MIR -25 237 159 2 1109 2467 95 3 0 chr13 68696111 68696437 -51587875 + ORR1A2 LTR MaLR 1 327 0 2 1109 262 355 90 5 chr13 68696437 68696572 -51587740 - MIR SINE MIR -104 158 9 2 1109 252 280 47 16 chr13 68696756 68696883 -51587429 + (TAGA)n Simple_repeat Simple_repeat 1 131 0 2 1109 1407 159 140 16 chr13 68697386 68697723 -51586589 - ORR1B1 LTR MaLR -1 393 1 2 1109 647 77 0 0 chr13 68698210 68698301 -51586011 + B2_Mm2 SINE B2 1 91 -104 2 1109 318 289 0 0 chr13 68698738 68698814 -51585498 + B1F1 SINE Alu 2 77 -72 2 1109 781 316 74 3 chr13 68699800 68700136 -51584176 + MTE2b LTR MaLR 1 360 -19 2 1109 1136 48 0 58 chr13 68700229 68700384 -51583928 - B1_Mus2 SINE Alu 0 147 2 2 1109 22 70 0 0 chr13 68700670 68700713 -51583599 + AT_rich Low_complexity Low_complexity 1 43 0 2 1109 198 91 0 0 chr13 68701109 68701142 -51583170 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1109 359 292 77 46 chr13 68704432 68704626 -51579686 + Lx8 LINE L1 7204 7403 -70 2 1109 1139 68 0 7 chr13 68706911 68707058 -51577254 + B1_Mus2 SINE Alu 2 147 0 2 1109 186 43 0 0 chr13 68707062 68707085 -51577227 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1109 298 229 67 77 chr13 68707829 68707933 -51576379 + B1F1 SINE Alu 46 148 -1 2 1109 297 135 0 0 chr13 68707933 68707985 -51576327 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 2 1109 439 236 143 20 chr13 68709266 68709413 -51574899 + B3A SINE B2 1 165 -33 2 1109 405 54 0 0 chr13 68709416 68709472 -51574840 + (TC)n Simple_repeat Simple_repeat 2 57 0 2 1109 261 0 0 0 chr13 68709472 68709501 -51574811 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1109 21 0 0 0 chr13 68709620 68709641 -51574671 + AT_rich Low_complexity Low_complexity 1 21 0 2 1109 309 103 44 0 chr13 68709794 68709862 -51574450 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1109 204 132 26 0 chr13 68710299 68710337 -51573975 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1109 326 222 55 11 chr13 68710357 68710448 -51573864 + B1_Mus1 SINE Alu 3 97 -51 2 1109 267 349 74 74 chr13 68710502 68710691 -51573621 + B4 SINE B4 41 229 -63 2 1109 474 18 0 0 chr13 68710728 68710783 -51573529 + (CA)n Simple_repeat Simple_repeat 1 55 0 2 1109 230 286 130 0 chr13 68711622 68711699 -51572613 + B4 SINE B4 4 90 -202 2 1109 317 328 81 58 chr13 68712045 68712304 -51572008 + LTR16A LTR ERVL 88 352 -99 2 1109 1061 82 0 40 chr13 68713252 68713404 -51570908 + B1_Mus2 SINE Alu 2 147 0 2 1109 231 114 0 0 chr13 68713404 68713439 -51570873 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1109 253 384 123 0 chr13 68716937 68717083 -51567229 + MER58A DNA MER1_type 17 180 -44 2 1109 268 267 118 62 chr13 68717574 68717587 -51566725 - RSINE1 SINE B4 -2 163 151 2 1109 447 19 0 0 chr13 68717587 68717639 -51566673 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1109 268 267 118 62 chr13 68717639 68717769 -51566543 - RSINE1 SINE B4 -15 150 12 2 1109 238 246 49 0 chr13 68718098 68718159 -51566153 + ID4 SINE ID 4 67 -16 2 1109 357 24 0 0 chr13 68718976 68719018 -51565294 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1109 255 158 33 19 chr13 68719074 68719147 -51565165 + B1_Mur4 SINE Alu 47 119 -1 2 1109 256 210 122 12 chr13 68719283 68719365 -51564947 + ID_B1 SINE B4 131 221 -3 2 1109 260 20 39 39 chr13 68719974 68720025 -51564287 + (CAAAAA)n Simple_repeat Simple_repeat 2 52 0 2 1109 1052 97 12 12 chr13 68720028 68720195 -51564117 + B2_Mm1t SINE B2 14 180 -13 2 1109 281 151 324 36 chr13 68720227 68720338 -51563974 + B2_Mm2 SINE B2 48 191 -2 2 1109 551 241 173 51 chr13 68725806 68726140 -51558172 + MTD LTR MaLR 5 419 0 2 1109 308 207 11 128 chr13 68726164 68726258 -51558054 + B1_Mur4 SINE Alu 1 83 -44 2 1109 2334 145 37 27 chr13 68727430 68727833 -51556479 + MTB_Mm LTR MaLR 1 407 0 2 1109 478 146 24 12 chr13 68728337 68728420 -51555892 + Lx6 LINE L1 7056 7139 -321 2 1109 1706 189 91 3 chr13 68728459 68728788 -51555524 + Lx6 LINE L1 7099 7456 -4 2 1109 402 321 43 12 chr13 68729299 68729460 -51554852 - MER57F LTR ERV1 -254 182 17 2 1109 1248 74 0 0 chr13 68730172 68730335 -51553977 + RMER17D2 LTR ERVK 1 163 -646 2 1109 793 99 15 15 chr13 68730330 68730463 -51553849 + RMER17D2 LTR ERVK 677 809 0 2 1109 285 128 0 0 chr13 68731340 68731387 -51552925 + (GGGA)n Simple_repeat Simple_repeat 3 49 0 2 1109 1209 187 185 9 chr13 68731826 68732150 -51552162 + MTD LTR MaLR 39 419 0 2 1109 324 286 45 45 chr13 68732170 68732302 -51552010 - MLT1C LTR MaLR -14 453 322 2 1109 180 0 0 0 chr13 68732374 68732394 -51551918 + (TG)n Simple_repeat Simple_repeat 2 21 0 2 1109 330 26 0 0 chr13 68732914 68732953 -51551359 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1109 648 67 0 0 chr13 68732953 68733042 -51551270 + (GA)n Simple_repeat Simple_repeat 1 90 0 2 1109 297 368 40 0 chr13 68733127 68733252 -51551060 + LTR16E1 LTR ERVL 408 537 -1 2 1109 356 190 39 20 chr13 68733269 68733371 -51550941 - Lx4B LINE L1 -3 7055 6952 2 1109 2005 97 21 7 chr13 68733371 68733651 -51550661 - Lx4A LINE L1 -314 6744 6461 2 1109 184 327 88 26 chr13 68733664 68733777 -51550535 - L2c LINE L2 -1 3386 3267 2 1109 580 323 79 48 chr13 68733891 68734320 -51549992 + RMER15 LTR ERVL 23 555 -20 2 1109 654 239 65 85 chr13 68734332 68734625 -51549687 + MER31A LTR ERV1 61 347 -138 2 1109 305 283 19 48 chr13 68734672 68734776 -51549536 + MER31A LTR ERV1 349 449 -36 2 1109 725 262 149 55 chr13 68734788 68735127 -51549185 - MTD LTR MaLR -20 399 6 2 1109 468 0 0 0 chr13 68735437 68735489 -51548823 + (TTTTA)n Simple_repeat Simple_repeat 1 52 0 2 1109 224 325 60 0 chr13 68736003 68736086 -51548226 + L2c LINE L2 3268 3355 -32 2 1109 208 222 14 14 chr13 68736404 68736477 -51547835 + GA-rich Low_complexity Low_complexity 3 75 0 2 1109 180 0 0 0 chr13 68736878 68736898 -51547414 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 2 1109 319 70 0 0 chr13 68737117 68737160 -51547152 - B1_Mur4 SINE Alu 0 150 108 2 1109 2120 167 35 11 chr13 68737625 68737994 -51546318 - MTC LTR MaLR -8 413 36 2 1109 255 292 163 119 chr13 68737990 68738309 -51546003 + RMER13A LTR ERVK 409 741 -119 2 1109 972 32 0 31 chr13 68738779 68738908 -51545404 - B1_Mus1 SINE Alu -2 146 22 2 1109 387 141 0 0 chr13 68738930 68739008 -51545304 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1109 362 113 0 19 chr13 68739021 68739075 -51545237 + HAL1-3A_ME LINE L1 1976 2028 -830 2 1109 666 211 0 8 chr13 68739103 68739907 -51544405 + (CA)n Simple_repeat Simple_repeat 1 797 0 2 1109 241 325 91 91 chr13 68740956 68741210 -51543102 + L2a LINE L2 3161 3414 -12 2 1109 578 262 7 40 chr13 68741767 68741918 -51542394 - B4 SINE B4 -66 226 81 3 1109 42 0 0 0 chr13 68742666 68742708 -51541604 + AT_rich Low_complexity Low_complexity 1 42 0 3 1109 420 241 6 11 chr13 68743096 68743272 -51541040 + CT-rich Low_complexity Low_complexity 3 177 0 3 1109 690 274 60 73 chr13 68743277 68743592 -51540720 - Lx8 LINE L1 -55 7418 7108 3 1109 305 308 109 17 chr13 68743820 68743939 -51540373 + B4A SINE B4 65 194 -98 3 1109 777 170 0 56 chr13 68743847 68743990 -51540322 + B1_Mus1 SINE Alu 13 147 -1 3 1109 353 123 0 15 chr13 68744034 68744100 -51540212 + (CA)n Simple_repeat Simple_repeat 2 66 0 3 1109 350 156 214 20 chr13 68744422 68744520 -51539792 - MLT1I LTR MaLR 0 411 295 3 1109 275 301 67 10 chr13 68744595 68744699 -51539613 - MLT1I LTR MaLR -230 181 72 3 1109 333 180 0 0 chr13 68744700 68744789 -51539523 + GA-rich Low_complexity Low_complexity 3 91 0 3 1109 508 326 112 69 chr13 68745055 68745404 -51538908 - MLT1C LTR MaLR -26 364 1 3 1109 23 68 0 0 chr13 68745578 68745622 -51538690 + AT_rich Low_complexity Low_complexity 1 44 0 3 1109 225 275 82 59 chr13 68745721 68745806 -51538506 - ORR1D2 LTR MaLR -4 366 280 3 1109 213 39 0 0 chr13 68746894 68746920 -51537392 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 3 1109 551 198 0 0 chr13 68747455 68747541 -51536771 + B3A SINE B2 8 93 -105 3 1109 385 197 43 147 chr13 68747560 68747653 -51536659 + B3A SINE B2 63 143 -50 3 1109 432 0 0 0 chr13 68747703 68747751 -51536561 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1109 641 342 67 0 chr13 68749324 68749578 -51534734 + MLT1A0 LTR MaLR 84 354 -11 3 1109 1053 24 0 0 chr13 68749777 68749901 -51534411 + (TG)n Simple_repeat Simple_repeat 1 124 0 3 1109 195 204 0 0 chr13 68750257 68750301 -51534011 + (TA)n Simple_repeat Simple_repeat 2 45 0 3 1109 215 346 13 0 chr13 68750318 68750396 -51533916 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 1109 444 295 6 39 chr13 68750362 68750542 -51533770 + (TATATG)n Simple_repeat Simple_repeat 6 179 0 3 1109 234 62 0 0 chr13 68753156 68753188 -51531124 + (TTA)n Simple_repeat Simple_repeat 1 32 0 3 1109 533 247 19 87 chr13 68753192 68753400 -51530912 - B3A SINE B2 0 198 5 3 1109 3931 37 0 0 chr13 68754205 68754662 -51529650 - L1Md_T LINE L1 0 6582 6126 3 1109 23750 22 0 0 chr13 68754662 68757622 -51526690 + L1Md_T LINE L1 3162 6121 -461 3 1109 263 314 169 14 chr13 68758033 68758201 -51526111 - MIRb SINE MIR -36 232 34 3 1109 7043 73 9 4 chr13 68759838 68760754 -51523558 + Lx LINE L1 5735 6654 0 3 1109 2600 311 86 24 chr13 68760899 68762089 -51522223 + Lx8 LINE L1 6095 7358 -115 3 1109 233 319 137 14 chr13 68765170 68765243 -51519069 - PB1D10 SINE Alu -30 87 6 3 1109 429 274 68 38 chr13 68768926 68769059 -51515253 - ID_B1 SINE B4 -2 222 86 3 1109 1998 88 107 10 chr13 68769421 68769721 -51514591 + ORR1A4 LTR MaLR 1 329 0 3 1109 183 260 60 0 chr13 68770103 68770153 -51514159 + L2 LINE L2 26 78 -3341 3 1109 541 281 126 27 chr13 68770474 68770737 -51513575 + MLT1B LTR MaLR 32 320 -70 3 1109 207 0 0 0 chr13 68770865 68770888 -51513424 + (TTA)n Simple_repeat Simple_repeat 2 24 0 3 1109 496 275 63 58 chr13 68771184 68771373 -51512939 - MER20 DNA MER1_type 0 219 30 3 1109 2333 167 40 5 chr13 68771536 68771934 -51512378 - MTC LTR MaLR -8 413 2 3 1109 231 146 0 0 chr13 68771977 68772018 -51512294 + (CAT)n Simple_repeat Simple_repeat 1 41 0 3 1109 370 368 7 36 chr13 68772038 68772176 -51512136 - RSINE1 SINE B4 -26 139 6 3 1109 403 290 18 18 chr13 68773151 68773260 -51511052 + MIRb SINE MIR 43 151 -117 3 1109 2286 229 63 65 chr13 68773277 68774019 -51510293 + Lx9 LINE L1 6776 7516 -128 3 1109 195 42 0 0 chr13 68774019 68774043 -51510269 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1109 456 19 0 0 chr13 68774042 68774095 -51510217 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 1109 37 39 0 0 chr13 68775226 68775277 -51509035 + AT_rich Low_complexity Low_complexity 1 51 0 3 1109 208 206 0 0 chr13 68776487 68776521 -51507791 + polypyrimidine Low_complexity Low_complexity 3 36 0 3 1109 190 316 37 25 chr13 68777236 68777317 -51506995 + MIRm SINE MIR 68 149 -127 3 1109 1619 197 38 30 chr13 68777978 68778345 -51505967 + ORR1D1 LTR MaLR 1 370 -4 3 1109 1364 234 70 9 chr13 68778392 68778737 -51505575 + MTD LTR MaLR 54 419 0 3 1109 1021 241 8 13 chr13 68779130 68779369 -51504943 + Lx7 LINE L1 6712 6949 -747 3 1109 4481 31 0 0 chr13 68781992 68782532 -51501780 - L1Md_T LINE L1 0 6582 6061 3 1109 199 125 0 0 chr13 68783682 68783714 -51500598 - MIRm SINE MIR -132 144 113 3 1109 195 371 27 45 chr13 68783997 68784107 -51500205 + MER5B DNA MER1_type 29 136 -42 3 1109 588 14 0 0 chr13 68785577 68785646 -51498666 + (CAGT)n Simple_repeat Simple_repeat 4 72 0 3 1109 217 298 96 37 chr13 68787111 68787247 -51497065 - MIRb SINE MIR -124 144 1 3 1109 337 327 37 19 chr13 68788001 68788163 -51496149 + RSINE1 SINE B4 1 165 0 3 1109 717 12 0 0 chr13 68788173 68788255 -51496057 + (CA)n Simple_repeat Simple_repeat 1 82 0 3 1109 2683 92 7 51 chr13 68789121 68789555 -51494757 - Lx LINE L1 0 6654 6240 3 1109 624 224 31 43 chr13 68789854 68790017 -51494295 - RSINE1 SINE B4 -1 164 4 3 1109 552 273 103 7 chr13 68790085 68790240 -51494072 - ID_B1 SINE B4 -28 196 27 3 1109 3504 44 0 5 chr13 68792122 68792531 -51491781 + MTB_Mm LTR MaLR 1 407 0 3 1109 422 93 47 0 chr13 68792977 68793063 -51491249 + (TCTA)n Simple_repeat Simple_repeat 3 92 0 3 1109 762 288 14 19 chr13 68794155 68794364 -51489948 - B3 SINE B2 -6 210 3 3 1109 23 0 0 0 chr13 68796180 68796203 -51488109 + AT_rich Low_complexity Low_complexity 1 23 0 3 1109 513 330 37 37 chr13 68799045 68799344 -51484968 - MLT1C LTR MaLR -150 317 19 3 1109 236 161 16 0 chr13 68799442 68799504 -51484808 + CT-rich Low_complexity Low_complexity 1 63 0 3 1109 552 281 107 20 chr13 68800869 68801065 -51483247 + B3 SINE B2 3 215 -1 3 1109 477 0 0 0 chr13 68801325 68801378 -51482934 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1109 612 27 0 0 chr13 68801378 68801451 -51482861 + (GA)n Simple_repeat Simple_repeat 2 75 0 3 1109 240 111 0 0 chr13 68804351 68804387 -51479925 + (TCCC)n Simple_repeat Simple_repeat 3 38 0 3 1109 519 17 0 0 chr13 68804387 68804447 -51479865 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1109 273 169 0 0 chr13 68804447 68804506 -51479806 + GA-rich Low_complexity Low_complexity 2 60 0 3 1109 225 239 53 53 chr13 68806102 68806177 -51478135 + BC1_Mm scRNA scRNA 7 81 -71 3 1109 651 60 0 0 chr13 68806815 68806899 -51477413 + (TCCA)n Simple_repeat Simple_repeat 4 87 0 3 1109 238 345 0 0 chr13 68807003 68807090 -51477222 + PB1 SINE Alu 22 108 -19 3 1109 1361 82 16 5 chr13 68809856 68810040 -51474272 - B2_Mm2 SINE B2 -9 186 1 3 1109 595 211 193 33 chr13 68812471 68812652 -51471660 + B3 SINE B2 1 210 -6 3 1110 415 218 27 0 chr13 68813252 68813362 -51470950 - Lx9 LINE L1 -1 7643 7531 3 1110 299 278 67 15 chr13 68813918 68814053 -51470259 + L1MB5 LINE L1 5876 6017 -157 3 1110 759 277 9 14 chr13 68814165 68814381 -51469931 - B3 SINE B2 0 216 2 3 1110 1093 226 148 26 chr13 68815780 68816199 -51468113 + L1MA8 LINE L1 5673 6142 -149 3 1110 270 237 0 0 chr13 68816209 68816285 -51468027 + (CA)n Simple_repeat Simple_repeat 2 77 0 3 1110 560 272 136 0 chr13 68816438 68816607 -51467705 - ID_B1 SINE B4 -7 217 26 3 1110 216 220 20 0 chr13 68816563 68816613 -51467699 - ID4_ SINE ID -15 68 18 3 1110 425 276 189 46 chr13 68817016 68817191 -51467121 + B3 SINE B2 3 202 -14 3 1110 293 162 0 14 chr13 68817219 68817288 -51467024 + (CCAA)n Simple_repeat Simple_repeat 2 69 0 3 1110 357 265 12 0 chr13 68818355 68818438 -51465874 - Lx8 LINE L1 -518 6955 6872 3 1110 29 47 0 0 chr13 68818512 68818555 -51465757 + AT_rich Low_complexity Low_complexity 1 43 0 3 1110 601 260 88 8 chr13 68818642 68818918 -51465394 - L1MB1 LINE L1 -272 6019 5729 3 1110 512 256 37 8 chr13 68820817 68820951 -51463361 + ID_B1 SINE B4 84 221 -3 3 1110 371 335 113 35 chr13 68821600 68821857 -51462455 + B4 SINE B4 14 290 -2 3 1110 452 86 14 0 chr13 68822409 68822479 -51461833 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 3 1110 195 42 0 0 chr13 68822970 68822994 -51461318 + (TGG)n Simple_repeat Simple_repeat 3 26 0 3 1110 229 89 44 0 chr13 68822994 68823039 -51461273 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1110 2445 86 6 0 chr13 68823282 68823606 -51460706 + ORR1A2 LTR MaLR 1 326 -1 3 1110 446 280 63 33 chr13 68824212 68824527 -51459785 - MTEa LTR MaLR -1 378 18 3 1110 384 318 60 53 chr13 68825055 68825270 -51459042 - L1M2 LINE L1 -482 5398 5203 3 1110 1559 54 0 0 chr13 68825270 68825456 -51458856 - B2_Mm1a SINE B2 -6 187 2 3 1110 384 317 58 49 chr13 68825456 68825712 -51458600 - L1M2 LINE L1 -912 5231 4927 3 1110 1027 271 82 22 chr13 68825704 68826168 -51458144 + L1MA4 LINE L1 5439 5930 -370 3 1110 485 333 0 0 chr13 68826191 68826311 -51458001 - B1F2 SINE Alu -11 138 19 3 1110 252 186 12 157 chr13 68827088 68827171 -51457141 - B3 SINE B2 -2 214 144 3 1110 835 140 201 13 chr13 68827483 68827642 -51456670 + B2_Mm2 SINE B2 1 189 -6 3 1110 247 293 67 48 chr13 68827799 68827903 -51456409 + PB1D7 SINE Alu 3 108 -12 3 1110 710 341 38 0 chr13 68828834 68829095 -51455217 + B4A SINE B4 18 288 -4 3 1110 320 0 25 0 chr13 68829097 68829137 -51455175 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1110 486 152 0 0 chr13 68829280 68829359 -51454953 - B3 SINE B2 -123 93 15 4 1110 498 281 157 0 chr13 68830082 68830115 -51454197 - B3 SINE B2 -6 210 167 4 1110 432 0 0 0 chr13 68830115 68830163 -51454149 + (TATG)n Simple_repeat Simple_repeat 2 49 0 4 1110 498 281 157 0 chr13 68830163 68830307 -51454005 - B3 SINE B2 -50 166 6 4 1110 3604 117 81 28 chr13 68830319 68830890 -51453422 + MT2B LTR ERVL 1 601 0 4 1110 1480 215 17 37 chr13 68831042 68831390 -51452922 + Lx9 LINE L1 7075 7415 -229 4 1110 4117 198 106 18 chr13 68832375 68833287 -51451025 + Lx9 LINE L1 6648 7640 -4 4 1110 496 346 60 77 chr13 68833288 68833836 -51450476 - L1MD LINE L1 -2933 3213 2675 4 1110 875 293 64 11 chr13 68833920 68834203 -51450109 + Lx9 LINE L1 6615 6912 -732 4 1110 443 284 32 35 chr13 68834269 68834527 -51449785 + MLT1A0 LTR MaLR 1 347 -18 4 1110 198 0 0 0 chr13 68836524 68836546 -51447766 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 4 1110 294 200 103 23 chr13 68836579 68836666 -51447646 + L1MA5 LINE L1 6184 6277 -23 4 1110 323 106 27 55 chr13 68837513 68837623 -51446689 + A-rich Low_complexity Low_complexity 4 110 0 4 1110 30 0 0 0 chr13 68838416 68838446 -51445866 + AT_rich Low_complexity Low_complexity 1 30 0 4 1110 26832 79 11 6 chr13 68838483 68842776 -51441536 - L1_Mus1 LINE L1 -1 6566 2250 4 1110 7407 33 0 0 chr13 68842776 68843591 -51440721 - L1Md_T LINE L1 0 6582 5768 4 1110 22570 127 10 47 chr13 68843591 68845986 -51438326 - L1VL1 LINE L1 -3618 2259 217 4 1110 216 0 0 0 chr13 68846796 68846820 -51437492 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1110 311 85 0 33 chr13 68847581 68847642 -51436670 + (TCTCTG)n Simple_repeat Simple_repeat 1 59 0 4 1110 815 313 10 63 chr13 68848149 68848449 -51435863 - B4A SINE B4 -8 284 1 4 1110 247 395 0 0 chr13 68848483 68848564 -51435748 + ID4 SINE ID 2 82 -1 4 1110 2061 114 3 3 chr13 68850616 68850898 -51433414 - Lx LINE L1 0 6654 6373 4 1110 863 158 0 71 chr13 68851381 68851551 -51432761 + URR1B DNA MER1_type 3 160 -65 4 1110 345 289 10 0 chr13 68852447 68852544 -51431768 - L1M3 LINE L1 -532 5657 5560 4 1110 478 71 62 23 chr13 68853483 68853613 -51430699 + (TCTA)n Simple_repeat Simple_repeat 4 138 0 4 1110 1356 119 9 6 chr13 68853627 68853973 -51430339 + (TCTA)n Simple_repeat Simple_repeat 1 347 0 4 1110 607 284 13 6 chr13 68854104 68854260 -51430052 - RSINE1 SINE B4 -4 161 5 4 1110 33 25 0 0 chr13 68854903 68854943 -51429369 + AT_rich Low_complexity Low_complexity 1 40 0 4 1110 360 0 0 0 chr13 68854970 68855010 -51429302 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1110 379 306 96 7 chr13 68855043 68855178 -51429134 - RSINE1 SINE B4 -16 149 3 4 1110 283 350 8 0 chr13 68855875 68855998 -51428314 + GA-rich Low_complexity Low_complexity 2 125 0 4 1110 372 287 26 17 chr13 68856314 68856431 -51427881 + MLT1A LTR MaLR 11 128 -246 4 1110 929 39 69 23 chr13 68856876 68857007 -51427305 - B1_Mur4 SINE Alu 0 150 14 4 1110 597 199 47 47 chr13 68856881 68857029 -51427283 - ID_B1 SINE B4 -2 222 75 4 1110 282 232 0 102 chr13 68857253 68857440 -51426872 + (CACTA)n Simple_repeat Simple_repeat 2 169 0 4 1110 322 225 0 99 chr13 68857494 68857686 -51426626 + (CACTA)n Simple_repeat Simple_repeat 2 174 0 4 1110 22 0 0 0 chr13 68859075 68859097 -51425215 + AT_rich Low_complexity Low_complexity 1 22 0 4 1110 342 168 95 0 chr13 68859109 68859204 -51425108 + Lx9 LINE L1 7539 7642 -2 4 1110 647 277 28 33 chr13 68862484 68862697 -51421615 + B3 SINE B2 1 212 -4 4 1110 4858 137 25 28 chr13 68863369 68864158 -51420154 + Lx2B LINE L1 6208 6994 -6 4 1110 612 0 0 0 chr13 68865149 68865217 -51419095 + (TC)n Simple_repeat Simple_repeat 1 68 0 4 1110 425 156 8 76 chr13 68865530 68865611 -51418701 + Lx9 LINE L1 7512 7587 -57 4 1110 2880 58 96 6 chr13 68865611 68865974 -51418338 + MTA_Mm LTR MaLR 1 396 0 4 1110 425 156 8 76 chr13 68865974 68866024 -51418288 + Lx9 LINE L1 7588 7634 -10 4 1110 196 276 44 44 chr13 68867321 68867412 -51416900 + MIRc SINE MIR 65 155 -113 4 1110 708 45 0 0 chr13 68868852 68868940 -51415372 + (TTCC)n Simple_repeat Simple_repeat 3 90 0 4 1110 24 0 0 0 chr13 68869762 68869786 -51414526 + AT_rich Low_complexity Low_complexity 1 24 0 4 1110 342 0 0 0 chr13 68871532 68871570 -51412742 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1110 582 257 96 43 chr13 68871603 68871790 -51412522 + B3A SINE B2 2 198 0 4 1110 374 309 35 35 chr13 68872514 68872658 -51411654 + MLT1F LTR MaLR 74 217 -250 4 1110 240 230 85 57 chr13 68873724 68873830 -51410482 - L4 LINE RTE -279 1750 1642 4 1110 1359 84 0 0 chr13 68874059 68874360 -51409952 + (GAAA)n Simple_repeat Simple_repeat 1 301 0 4 1110 23 0 0 0 chr13 68875406 68875429 -51408883 + AT_rich Low_complexity Low_complexity 1 23 0 4 1110 397 341 171 16 chr13 68875539 68875849 -51408463 + MLT1F LTR MaLR 188 545 -3 4 1110 378 0 0 0 chr13 68877653 68877695 -51406617 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 4 1110 845 273 156 0 chr13 68879369 68879658 -51404654 - Lx8 LINE L1 -5 7468 7135 4 1110 322 341 21 62 chr13 68880516 68880660 -51403652 - ORR1E LTR MaLR -221 138 1 4 1110 376 209 9 28 chr13 68880774 68880880 -51403432 - MTEa LTR MaLR -2 417 279 4 1110 881 290 57 21 chr13 68882074 68882356 -51401956 - MTEa LTR MaLR -82 297 6 4 1110 545 324 86 16 chr13 68883274 68883519 -51400793 + RMER15 LTR ERVL 300 561 -14 4 1110 692 340 18 7 chr13 68883850 68884131 -51400181 + B4A SINE B4 2 285 -7 4 1110 226 222 0 0 chr13 68884134 68884179 -51400133 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1110 226 371 12 19 chr13 68884354 68884516 -51399796 - MIR SINE MIR -9 253 93 4 1110 510 31 0 0 chr13 68885465 68885529 -51398783 + (CCAA)n Simple_repeat Simple_repeat 1 64 0 4 1110 2641 81 3 0 chr13 68887032 68887355 -51396957 + ORR1A2 LTR MaLR 1 324 -3 4 1110 189 276 84 84 chr13 68887361 68887444 -51396868 + L2b LINE L2 3289 3371 -4 4 1110 231 331 112 63 chr13 68888528 68888938 -51395374 - MLT1H LTR MaLR 0 549 120 4 1110 816 30 0 0 chr13 68889334 68889433 -51394879 + (GA)n Simple_repeat Simple_repeat 2 100 0 4 1110 1540 174 75 55 chr13 68892001 68892200 -51392112 - RMER17C LTR ERVK 0 410 218 4 1110 723 24 0 0 chr13 68892200 68892285 -51392027 + (GA)n Simple_repeat Simple_repeat 2 86 0 4 1110 1540 174 75 55 chr13 68892285 68892487 -51391825 - RMER17C LTR ERVK -193 217 1 4 1110 404 264 18 0 chr13 68892526 68892636 -51391676 + ORR1E LTR MaLR 7 118 -241 4 1110 4322 75 1 7 chr13 68892644 68893225 -51391087 + L1_Mus3 LINE L1 5796 6378 -260 4 1110 676 156 43 3 chr13 68894240 68894616 -51389696 + (TCTA)n Simple_repeat Simple_repeat 1 391 0 4 1110 484 304 95 26 chr13 68894673 68894937 -51389375 - MLT2C2 LTR ERVL -169 295 14 4 1110 342 0 0 0 chr13 68898875 68898913 -51385399 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1110 459 311 22 70 chr13 68899299 68899492 -51384820 + MLT1D LTR MaLR 19 209 -296 4 1110 219 69 0 0 chr13 68899492 68899521 -51384791 + (ATGGTG)n Simple_repeat Simple_repeat 5 33 0 4 1110 459 311 22 70 chr13 68899521 68899555 -51384757 + MLT1D LTR MaLR 210 235 -270 4 1110 262 255 86 75 chr13 68899533 68899707 -51384605 + MLT1D LTR MaLR 183 358 -147 4 1110 21 36 0 0 chr13 68900783 68900811 -51383501 + AT_rich Low_complexity Low_complexity 1 28 0 4 1110 1983 193 107 26 chr13 68901266 68901724 -51382588 - Lx4B LINE L1 -10 7048 6554 4 1110 334 229 34 26 chr13 68901837 68901968 -51382344 - L1M2 LINE L1 -3962 2887 2753 4 1110 443 245 0 89 chr13 68902089 68902201 -51382111 + RSINE1 SINE B4 45 146 -19 4 1110 412 299 88 13 chr13 68902304 68902463 -51381849 + MER2 DNA MER2_type 17 187 -158 4 1110 364 292 147 100 chr13 68902898 68903259 -51381053 + MLT2D LTR ERVL 28 405 -9 4 1110 4296 81 5 2 chr13 68903863 68904435 -51379877 + L1_Mus3 LINE L1 6065 6638 0 4 1110 367 328 141 18 chr13 68905974 68906288 -51378024 + MLT2D LTR ERVL 23 392 -22 4 1110 29 28 0 0 chr13 68907078 68907114 -51377198 + AT_rich Low_complexity Low_complexity 1 36 0 4 1110 372 152 0 0 chr13 68907114 68907180 -51377132 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 1110 350 259 127 48 chr13 68907184 68907350 -51376962 - B3A SINE B2 -16 182 4 4 1110 552 266 104 7 chr13 68908427 68908571 -51375741 - B3 SINE B2 -56 160 3 4 1110 1329 314 79 6 chr13 68908584 68909055 -51375257 - Lx8 LINE L1 -2 7471 6967 4 1110 291 286 54 48 chr13 68909078 68909225 -51375087 + MLT2D LTR ERVL 419 566 -1 4 1110 1826 160 137 18 chr13 68909771 68910165 -51374147 + BGLII_B LTR ERVK 1 441 0 4 1110 276 288 55 33 chr13 68910288 68910471 -51373841 + L2 LINE L2 1626 1812 -1607 4 1110 301 243 14 14 chr13 68910475 68910546 -51373766 - PB1 SINE Alu -12 115 45 4 1110 557 153 234 0 chr13 68913504 68913615 -51370697 + B1_Mur3 SINE Alu 13 149 0 4 1110 25 65 0 0 chr13 68914444 68914490 -51369822 + AT_rich Low_complexity Low_complexity 1 46 0 4 1110 495 181 92 59 chr13 68915218 68915371 -51368941 - MTD LTR MaLR -261 158 1 4 1110 887 286 98 65 chr13 68915404 68915771 -51368541 + MTE2a LTR MaLR 1 379 0 4 1110 203 333 81 27 chr13 68915873 68916021 -51368291 - MIR SINE MIR -95 167 12 4 1110 328 197 0 0 chr13 68916682 68916743 -51367569 + Lx6 LINE L1 7382 7442 -18 4 1110 204 40 0 0 chr13 68916743 68916768 -51367544 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 4 1110 931 309 78 106 chr13 68917096 68917457 -51366855 + Lx8 LINE L1 6254 6618 -855 4 1110 8209 43 2 4 chr13 68917457 68918452 -51365860 + L1Md_F2 LINE L1 5587 6579 -3 4 1110 931 309 78 106 chr13 68918452 68918645 -51365667 + Lx8 LINE L1 6619 6792 -681 4 1110 246 22 64 21 chr13 68918645 68918692 -51365620 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 4 1110 776 40 0 0 chr13 68918692 68918793 -51365519 - B1_Mus2 SINE Alu 0 147 47 4 1110 1155 342 80 6 chr13 68918794 68919321 -51364991 + Lx8 LINE L1 6781 7346 -127 4 1110 317 234 152 30 chr13 68919463 68919595 -51364717 + Tigger5 DNA MER2_type 2134 2281 -125 4 1110 496 372 93 18 chr13 68919743 68920140 -51364172 + MT2A LTR ERVL 3 429 -104 5 1110 180 0 0 0 chr13 68920785 68920805 -51363507 + (TA)n Simple_repeat Simple_repeat 1 20 0 5 1110 459 0 0 0 chr13 68921521 68921572 -51362740 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1110 318 354 77 71 chr13 68923120 68923460 -51360852 + MER54A LTR ERVL 1 342 -559 5 1110 4541 47 0 5 chr13 68923460 68924021 -51360291 - L1Md_F2 LINE L1 -1 6581 6024 5 1110 24 0 0 0 chr13 68924609 68924633 -51359679 + AT_rich Low_complexity Low_complexity 1 24 0 5 1110 454 314 87 26 chr13 68925732 68925961 -51358351 - Lx8 LINE L1 -611 6862 6620 5 1110 1355 258 124 36 chr13 68925975 68926554 -51357758 + Lx8 LINE L1 6842 7471 -2 5 1110 881 191 53 11 chr13 68927090 68927280 -51357032 - B3 SINE B2 -5 211 14 5 1110 437 327 116 77 chr13 68927740 68927828 -51356484 + MLT1D LTR MaLR 6 94 -411 5 1110 498 309 123 5 chr13 68927828 68928023 -51356289 - ID_B1 SINE B4 -3 221 4 5 1110 437 327 116 77 chr13 68928023 68928415 -51355897 + MLT1D LTR MaLR 95 505 0 5 1110 2747 71 18 18 chr13 68928836 68928927 -51355385 + MTB LTR MaLR 1 93 -307 5 1110 4552 131 30 15 chr13 68928927 68929724 -51354588 + RMER17D2 LTR ERVK 1 809 0 5 1110 2747 71 18 18 chr13 68929724 68930032 -51354280 + MTB LTR MaLR 94 400 0 5 1110 561 264 7 0 chr13 68930135 68930275 -51354037 - B1F SINE Alu -6 143 3 5 1110 264 134 36 12 chr13 68930652 68930735 -51353577 + (CAAA)n Simple_repeat Simple_repeat 1 85 0 5 1110 555 16 0 0 chr13 68931397 68931461 -51352851 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1110 357 24 0 0 chr13 68931489 68931531 -51352781 + (TGG)n Simple_repeat Simple_repeat 3 44 0 5 1110 279 0 0 0 chr13 68931766 68931797 -51352515 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 1110 243 229 0 125 chr13 68931799 68931879 -51352433 - B4A SINE B4 -221 71 2 5 1110 481 276 60 87 chr13 68932572 68932755 -51351557 - B3A SINE B2 -10 188 11 5 1110 246 274 11 35 chr13 68933049 68933136 -51351176 + RMER15 LTR ERVL 337 421 -154 5 1110 215 109 43 21 chr13 68933218 68933265 -51351047 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 5 1110 205 329 0 14 chr13 68933568 68933639 -51350673 + GA-rich Low_complexity Low_complexity 3 72 0 5 1110 1250 276 16 34 chr13 68934558 68934944 -51349368 + MTEb LTR MaLR 1 379 0 5 1110 237 65 0 0 chr13 68935717 68935748 -51348564 + (CAACC)n Simple_repeat Simple_repeat 5 35 0 5 1110 189 0 0 0 chr13 68935830 68935851 -51348461 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 5 1110 285 348 74 16 chr13 68936580 68936770 -51347542 - L1M5 LINE L1 -424 5700 5500 5 1110 196 137 19 19 chr13 68938044 68938096 -51346216 + T-rich Low_complexity Low_complexity 2 53 0 5 1110 355 168 88 7 chr13 68938160 68938261 -51346051 + Lx2 LINE L1 6693 6763 -234 5 1110 802 189 7 13 chr13 68938261 68938411 -51345901 - B1_Mur2 SINE Alu 0 149 1 5 1110 794 282 45 45 chr13 68939229 68939519 -51344793 + B4A SINE B4 1 290 -2 5 1110 224 213 16 0 chr13 68939519 68939580 -51344732 + (CATA)n Simple_repeat Simple_repeat 4 65 0 5 1110 485 220 17 17 chr13 68939629 68939805 -51344507 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 5 1110 498 46 0 0 chr13 68939960 68940025 -51344287 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 1110 393 331 90 7 chr13 68940027 68940182 -51344130 - B3A SINE B2 -30 168 1 5 1110 1175 74 0 0 chr13 68942420 68942568 -51341744 + B1_Mus1 SINE Alu 1 148 0 5 1110 278 70 40 53 chr13 68942569 68942645 -51341667 + A-rich Low_complexity Low_complexity 2 76 0 5 1111 1070 16 8 0 chr13 68944640 68944768 -51339544 + (TCTA)n Simple_repeat Simple_repeat 1 129 0 5 1111 356 326 73 10 chr13 68945258 68945450 -51338862 - MLT1B LTR MaLR -186 204 1 5 1111 402 282 53 60 chr13 68945487 68945638 -51338674 - RSINE1 SINE B4 -2 163 14 5 1111 303 283 18 54 chr13 68945840 68945952 -51338360 - Lx8 LINE L1 -341 7132 7025 5 1111 316 287 22 0 chr13 68945908 68946009 -51338303 + Lx8 LINE L1 6909 7010 -686 5 1111 485 292 65 68 chr13 68946231 68946554 -51337758 - MER119 DNA MER1_type -14 569 248 5 1111 266 369 118 0 chr13 68946991 68947262 -51337050 - LTR33 LTR ERVL -5 510 208 5 1111 802 215 318 63 chr13 68950077 68950397 -51333915 - RLTR22_Mur LTR ERVK -259 1589 1445 5 1111 300 120 0 0 chr13 68950397 68950447 -51333865 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1111 802 259 67 120 chr13 68950447 68950743 -51333569 - RLTR22_Mur LTR ERVK -404 1444 1163 5 1111 1473 251 65 124 chr13 68950848 68951590 -51332722 - RLTR22_Mur LTR ERVK -1150 698 1 5 1111 1265 201 5 0 chr13 68951934 68952158 -51332154 - URR1A DNA MER1_type 0 226 2 5 1111 1542 167 46 10 chr13 68955821 68956123 -51328189 - Lx9 LINE L1 0 7644 7332 5 1111 273 273 0 0 chr13 68956123 68956189 -51328123 + Lx9 LINE L1 7136 7201 -443 5 1111 284 298 0 6 chr13 68956684 68956856 -51327456 + (TG)n Simple_repeat Simple_repeat 2 172 0 5 1111 2432 80 0 16 chr13 68958027 68958343 -51325969 + RLTR10E LTR ERVK 1 311 0 5 1111 214 383 66 8 chr13 68959280 68959401 -51324911 - MER5A DNA MER1_type -56 133 6 5 1111 31 0 0 0 chr13 68959710 68959741 -51324571 + AT_rich Low_complexity Low_complexity 1 31 0 5 1111 414 310 30 15 chr13 68959770 68959901 -51324411 - RSINE1 SINE B4 0 165 33 5 1111 888 10 0 0 chr13 68960721 68960822 -51323490 + (TC)n Simple_repeat Simple_repeat 2 102 0 5 1111 279 0 0 0 chr13 68960822 68960852 -51323460 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1111 183 173 0 0 chr13 68961215 68961267 -51323045 + (TAA)n Simple_repeat Simple_repeat 2 53 0 5 1111 583 297 115 0 chr13 68961946 68962111 -51322201 + B3 SINE B2 9 192 -24 5 1111 435 38 0 0 chr13 68962114 68962167 -51322145 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1111 829 267 11 2 chr13 68962420 68962630 -51321682 - B3 SINE B2 0 216 1 5 1111 21 36 0 0 chr13 68962980 68963008 -51321304 + AT_rich Low_complexity Low_complexity 1 28 0 5 1111 222 37 0 0 chr13 68963091 68963118 -51321194 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 1111 1025 101 7 0 chr13 68963120 68963258 -51321054 - B1_Mus1 SINE Alu -6 142 4 5 1111 546 86 0 0 chr13 68963376 68963457 -51320855 + (TG)n Simple_repeat Simple_repeat 1 81 0 5 1111 558 0 0 0 chr13 68963643 68963705 -51320607 + (TC)n Simple_repeat Simple_repeat 2 63 0 5 1111 210 37 0 0 chr13 68963705 68963731 -51320581 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1111 22 0 0 0 chr13 68964153 68964175 -51320137 + AT_rich Low_complexity Low_complexity 1 22 0 5 1111 462 65 0 0 chr13 68965312 68965374 -51318938 + (TATG)n Simple_repeat Simple_repeat 2 63 0 5 1111 1160 253 100 0 chr13 68966341 68966661 -51317651 + ORR1D2 LTR MaLR 17 368 -2 5 1111 217 269 63 13 chr13 68966705 68966784 -51317528 + ID4_ SINE ID 1 83 0 5 1111 200 196 0 0 chr13 68966859 68966905 -51317407 + (CAGA)n Simple_repeat Simple_repeat 3 48 0 5 1111 511 331 42 5 chr13 68967806 68967997 -51316315 + B4 SINE B4 1 198 -94 5 1111 3135 59 52 0 chr13 68968021 68968408 -51315904 + MTB_Mm LTR MaLR 1 407 0 5 1111 24 32 0 0 chr13 68968667 68968698 -51315614 + AT_rich Low_complexity Low_complexity 1 31 0 5 1111 24 0 0 0 chr13 68969291 68969315 -51314997 + AT_rich Low_complexity Low_complexity 1 24 0 5 1111 678 148 8 0 chr13 68969315 68969443 -51314869 - Lx4A LINE L1 0 7058 6930 5 1111 501 97 0 0 chr13 68970062 68970134 -51314178 + (TTTA)n Simple_repeat Simple_repeat 4 75 0 5 1111 419 321 89 44 chr13 68971155 68971403 -51312909 + RMER15 LTR ERVL 298 556 -19 5 1111 358 355 58 19 chr13 68971551 68971861 -51312451 - L1MEf LINE L1 -1425 4721 4400 5 1111 230 317 148 36 chr13 68972019 68972236 -51312076 - L1MEf LINE L1 -1950 4196 3950 5 1111 1101 50 0 7 chr13 68972236 68972376 -51311936 + B1_Mm SINE Alu 1 139 -8 5 1111 696 83 0 0 chr13 68972376 68972472 -51311840 + (GAAA)n Simple_repeat Simple_repeat 2 97 0 5 1111 230 317 148 36 chr13 68972472 68972584 -51311728 - L1MEf LINE L1 -2197 3949 3830 5 1111 476 222 10 29 chr13 68972835 68972937 -51311375 + PB1D10 SINE Alu 1 100 -17 5 1111 231 310 108 37 chr13 68973713 68974008 -51310304 - L1MEf LINE L1 -4659 1583 1268 5 1111 526 291 41 86 chr13 68974092 68974382 -51309930 - ORR1E LTR MaLR -62 297 21 5 1111 27 29 0 0 chr13 68975061 68975095 -51309217 + AT_rich Low_complexity Low_complexity 1 34 0 5 1111 2352 162 49 14 chr13 68975121 68975548 -51308764 - Lx4B LINE L1 -4 7054 6613 5 1111 243 61 0 0 chr13 68975548 68975581 -51308731 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1111 3465 76 14 21 chr13 68975586 68976069 -51308243 - L1_Mus3 LINE L1 -1 6637 6158 5 1111 1257 40 0 0 chr13 68976069 68976219 -51308093 + L1_Mus3 LINE L1 5994 6143 -495 5 1111 2998 38 11 3 chr13 68976223 68976591 -51307721 - L1Md_F3 LINE L1 0 6584 6214 5 1111 458 190 5 2 chr13 68976597 68976683 -51307629 - Lx4B LINE L1 -382 6618 6531 5 1111 26 0 0 0 chr13 68977023 68977049 -51307263 + AT_rich Low_complexity Low_complexity 1 26 0 5 1111 579 74 0 0 chr13 68977705 68977786 -51306526 + (CA)n Simple_repeat Simple_repeat 2 82 0 5 1111 423 52 0 0 chr13 68978301 68978359 -51305953 + (TC)n Simple_repeat Simple_repeat 2 59 0 5 1111 207 0 0 0 chr13 68978362 68978385 -51305927 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1111 180 0 0 0 chr13 68978385 68978404 -51305908 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 1111 297 0 0 0 chr13 68978404 68978436 -51305876 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1111 1024 144 183 10 chr13 68980301 68980558 -51303754 + RMER10B LTR ERVL 1 297 -145 5 1111 905 187 30 5 chr13 68980585 68980784 -51303528 + RMER10B LTR ERVL 195 398 0 5 1111 200 155 16 49 chr13 68981284 68981345 -51302967 + A-rich Low_complexity Low_complexity 4 62 0 5 1111 286 279 212 23 chr13 68981605 68981737 -51302575 + Tigger5 DNA MER2_type 25 181 -2225 5 1111 630 0 0 0 chr13 68981904 68981974 -51302338 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 1111 420 234 57 88 chr13 68983368 68983527 -51300785 + MTEa LTR MaLR 151 304 -75 5 1111 1263 126 16 0 chr13 68984391 68984581 -51299731 + B2_Mm2 SINE B2 3 195 0 5 1111 198 0 0 0 chr13 68985494 68985516 -51298796 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 1111 441 104 0 0 chr13 68985516 68985593 -51298719 + (GA)n Simple_repeat Simple_repeat 2 78 0 6 1111 1386 258 130 14 chr13 68986114 68986538 -51297774 + Lx8 LINE L1 7001 7473 0 6 1111 3864 273 17 38 chr13 68988241 68989343 -51294969 + Lx7 LINE L1 6209 7287 -409 6 1111 199 106 42 21 chr13 68989367 68989415 -51294897 + T-rich Low_complexity Low_complexity 1 49 0 6 1111 1212 54 0 13 chr13 68989415 68989565 -51294747 - B1_Mus1 SINE Alu 0 148 1 6 1111 203 189 0 0 chr13 68989710 68989747 -51294565 + A-rich Low_complexity Low_complexity 1 37 0 6 1111 773 21 0 10 chr13 68990298 68990394 -51293918 + (TTCC)n Simple_repeat Simple_repeat 2 96 0 6 1111 27 81 0 0 chr13 68991471 68991533 -51292779 + AT_rich Low_complexity Low_complexity 1 62 0 6 1111 473 315 136 53 chr13 68991582 68991847 -51292465 - B4A SINE B4 -5 287 1 6 1111 343 62 0 58 chr13 68992636 68992705 -51291607 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 6 1111 199 54 54 0 chr13 68993324 68993361 -51290951 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1111 209 235 0 29 chr13 68993498 68993568 -51290744 + GA-rich Low_complexity Low_complexity 2 69 0 6 1111 192 200 0 0 chr13 68993605 68993645 -51290667 + GA-rich Low_complexity Low_complexity 1 40 0 6 1111 787 291 75 0 chr13 68993870 68994135 -51290177 - B4A SINE B4 -6 286 2 6 1111 897 10 0 0 chr13 68996491 68996593 -51287719 + (GAA)n Simple_repeat Simple_repeat 2 103 0 6 1111 234 0 0 0 chr13 68996593 68996619 -51287693 + (TAG)n Simple_repeat Simple_repeat 1 26 0 6 1111 180 0 0 0 chr13 68997138 68997158 -51287154 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1111 586 244 8 0 chr13 68997158 68997289 -51287023 - B1_Mur1 SINE Alu -9 140 9 6 1111 706 274 5 62 chr13 68999736 68999946 -51284366 + B3A SINE B2 1 198 0 6 1111 188 326 116 0 chr13 69001133 69001219 -51283093 + MIR SINE MIR 28 123 -139 1 1111 434 385 47 64 chr13 69002363 69002848 -51281464 + MLT1F2 LTR MaLR 19 495 -65 2 1111 322 298 77 72 chr13 69002933 69003154 -51281158 + ERVL-B4-int LTR ERVL 5490 5711 -3 3 1111 769 321 50 72 chr13 69003162 69003562 -51280750 + MLT2C1 LTR ERVL 7 397 0 3 1111 517 245 162 36 chr13 69003587 69003921 -51280391 + L1MC LINE L1 2882 3257 -2889 4 1111 341 167 0 27 chr13 69004155 69004229 -51280083 + CT-rich Low_complexity Low_complexity 1 72 0 5 1111 1026 118 6 17 chr13 69004229 69004410 -51279902 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 6 1111 4252 133 35 33 chr13 69004415 69005120 -51279192 - Lx LINE L1 -21 6633 5927 7 1111 758 307 36 47 chr13 69006210 69006487 -51277825 + B4 SINE B4 5 278 -14 8 1111 369 0 0 0 chr13 69006528 69006569 -51277743 + (CA)n Simple_repeat Simple_repeat 1 41 0 9 1111 823 106 69 2 chr13 69008542 69008678 -51275634 - Lx4B LINE L1 -508 6550 6430 1 1111 1117 172 5 0 chr13 69008670 69008856 -51275456 - Lx4A LINE L1 -660 6398 6212 1 1111 263 387 27 36 chr13 69008959 69009069 -51275243 + B4A SINE B4 36 144 -148 1 1111 614 235 15 0 chr13 69009428 69009560 -51274752 + ID_B1 SINE B4 90 223 -1 1 1111 22 0 0 0 chr13 69011098 69011120 -51273192 + AT_rich Low_complexity Low_complexity 1 22 0 1 1111 189 315 70 53 chr13 69012485 69012599 -51271713 - L3b LINE CR1 -343 139 24 1 1111 318 256 0 165 chr13 69012716 69012744 -51271568 + ORR1D1 LTR MaLR 1 28 -346 1 1111 3189 55 29 3 chr13 69012744 69013130 -51271182 - MTA_Mm LTR MaLR 0 396 1 1 1111 318 256 0 165 chr13 69013130 69013204 -51271108 + ORR1D1 LTR MaLR 29 86 -288 1 1111 1859 177 46 11 chr13 69013202 69013550 -51270762 - ORR1D1 LTR MaLR -14 360 1 1 1111 723 212 226 23 chr13 69013550 69013767 -51270545 + ORR1D1 LTR MaLR 110 370 -4 1 1111 325 277 61 50 chr13 69014972 69015071 -51269241 - RSINE1 SINE B4 -36 129 30 1 1111 319 240 58 29 chr13 69015177 69015280 -51269032 + RSINE1 SINE B4 2 107 -58 2 1111 23 33 0 0 chr13 69015359 69015389 -51268923 + AT_rich Low_complexity Low_complexity 1 30 0 2 1111 306 0 0 0 chr13 69016712 69016746 -51267566 + (TATG)n Simple_repeat Simple_repeat 2 35 0 2 1111 281 351 38 57 chr13 69016936 69017047 -51267265 + MLT1D LTR MaLR 275 385 -120 2 1111 345 24 0 0 chr13 69017047 69017089 -51267223 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1111 281 351 38 57 chr13 69017089 69017134 -51267178 + MLT1D LTR MaLR 386 428 -77 2 1111 400 297 205 73 chr13 69017869 69018196 -51266116 + ORR1E LTR MaLR 1 370 0 2 1111 565 288 165 14 chr13 69018378 69018596 -51265716 + RMER15 LTR ERVL 276 526 -49 2 1111 188 316 74 25 chr13 69018752 69018833 -51265479 - MIR3 SINE MIR -120 88 4 2 1111 22 0 0 0 chr13 69019086 69019108 -51265204 + AT_rich Low_complexity Low_complexity 1 22 0 2 1111 200 143 71 0 chr13 69019229 69019271 -51265041 + T-rich Low_complexity Low_complexity 1 45 0 2 1111 1002 129 0 0 chr13 69019271 69019434 -51264878 + (TTC)n Simple_repeat Simple_repeat 3 165 0 3 1111 486 0 0 0 chr13 69020087 69020141 -51264171 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1111 540 250 81 32 chr13 69022159 69022346 -51261966 + MTE2a LTR MaLR 181 368 -2 3 1111 422 256 78 62 chr13 69022557 69022686 -51261626 + ID_B1 SINE B4 93 223 -1 3 1111 564 15 0 0 chr13 69022759 69022824 -51261488 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1111 1017 162 106 0 chr13 69023076 69023274 -51261038 - URR1B DNA MER1_type 0 225 7 3 1111 2474 206 43 8 chr13 69023575 69024060 -51260252 - Lx5 LINE L1 0 7050 6549 3 1111 3400 71 0 12 chr13 69025062 69025474 -51258838 - MTB_Mm LTR MaLR 0 407 1 3 1111 288 186 0 0 chr13 69026588 69026647 -51257665 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1111 236 326 136 105 chr13 69027151 69027408 -51256904 + B4 SINE B4 28 292 0 3 1111 811 302 150 38 chr13 69027618 69028178 -51256134 + L1MB5 LINE L1 5552 6174 0 4 1111 239 0 32 0 chr13 69031760 69031791 -51252521 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 1111 320 281 158 40 chr13 69032019 69032171 -51252141 - MLT1D LTR MaLR 0 505 336 4 1111 39032 44 0 3 chr13 69032343 69038783 -51245529 - L1Md_T LINE L1 0 6585 68 4 1111 963 242 22 50 chr13 69039849 69039957 -51244355 - B3 SINE B2 0 216 117 4 1111 1921 191 42 8 chr13 69039957 69040317 -51243995 + ORR1D1 LTR MaLR 1 372 -2 4 1111 963 242 22 50 chr13 69040317 69040430 -51243882 - B3 SINE B2 -100 116 1 4 1111 346 296 56 22 chr13 69040544 69040724 -51243588 + L1M2 LINE L1 5293 5478 -834 4 1111 258 266 126 112 chr13 69040860 69041099 -51243213 - ORR1E LTR MaLR -83 276 51 4 1111 1137 278 118 3 chr13 69041153 69041525 -51242787 + Lx8 LINE L1 6640 7054 -419 4 1111 644 218 23 0 chr13 69041899 69042032 -51242280 - B1F SINE Alu -5 144 9 4 1111 285 75 0 0 chr13 69042050 69042090 -51242222 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 5 1111 432 0 0 0 chr13 69042204 69042252 -51242060 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1111 312 164 115 0 chr13 69042850 69042911 -51241401 - ID4 SINE ID -15 68 1 5 1111 237 206 122 10 chr13 69043589 69043687 -51240625 - Lx9 LINE L1 -4 7640 7532 5 1111 258 156 0 0 chr13 69043691 69043736 -51240576 + C-rich Low_complexity Low_complexity 5 49 0 5 1111 227 337 0 0 chr13 69043784 69043867 -51240445 - Lx9 LINE L1 -228 7416 7334 5 1111 566 298 7 26 chr13 69044012 69044167 -51240145 - B4A SINE B4 0 292 141 5 1111 337 222 97 0 chr13 69044166 69044238 -51240074 - B3 SINE B2 -137 79 1 5 1111 22 80 0 0 chr13 69044239 69044289 -51240023 + AT_rich Low_complexity Low_complexity 1 50 0 5 1111 543 241 3 3 chr13 69046395 69046775 -51237537 + (CA)n Simple_repeat Simple_repeat 1 380 0 5 1111 453 81 0 0 chr13 69046937 69046999 -51237313 + (GGA)n Simple_repeat Simple_repeat 3 64 0 5 1111 195 42 0 0 chr13 69046999 69047023 -51237289 + (CAA)n Simple_repeat Simple_repeat 2 25 0 6 1111 224 200 0 0 chr13 69047899 69047944 -51236368 + GA-rich Low_complexity Low_complexity 3 47 0 6 1111 395 92 0 15 chr13 69047945 69048011 -51236301 + (GGA)n Simple_repeat Simple_repeat 2 66 0 6 1111 233 287 67 22 chr13 69048180 69048269 -51236043 - L1MD3 LINE L1 -1186 6809 6717 6 1111 356 175 0 0 chr13 69048520 69048583 -51235729 - MTD LTR MaLR 0 419 357 6 1111 357 331 175 32 chr13 69048770 69049059 -51235253 - L1MC3 LINE L1 -85 7700 7338 6 1111 2410 111 158 13 chr13 69049059 69049444 -51234868 + BGLII_B LTR ERVK 1 441 0 6 1111 357 331 175 32 chr13 69049444 69049834 -51234478 - L1MC3 LINE L1 -448 7337 6924 6 1111 22 70 0 0 chr13 69050000 69050043 -51234269 + AT_rich Low_complexity Low_complexity 1 43 0 6 1111 531 284 68 57 chr13 69050083 69050343 -51233969 - B4A SINE B4 0 292 1 6 1111 477 0 0 0 chr13 69052071 69052124 -51232188 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 6 1111 284 295 64 0 chr13 69052477 69052555 -51231757 - ID_B1 SINE B4 -14 210 128 7 1111 269 358 48 69 chr13 69053117 69053450 -51230862 - Lx8 LINE L1 0 7473 7148 7 1111 516 281 58 13 chr13 69053591 69053746 -51230566 - Lx8 LINE L1 -373 7100 6939 7 1111 1877 178 107 28 chr13 69055547 69055911 -51228401 - ORR1B1 LTR MaLR 0 394 2 7 1111 481 263 104 13 chr13 69056033 69056187 -51228125 + RLTR20B3 LTR ERVK 1 168 -409 7 1111 565 295 21 16 chr13 69056183 69056369 -51227943 + RLTR20B3 LTR ERVK 293 479 -98 7 1111 5569 75 3 1 chr13 69056369 69057106 -51227206 - L1_Mm LINE L1 -1341 4542 3805 7 1111 9264 60 26 1 chr13 69057102 69058266 -51226046 + L1_Mm LINE L1 4547 5739 -144 7 1111 3134 78 2 12 chr13 69058267 69058668 -51225644 + L1_Mus1 LINE L1 6171 6567 0 7 1111 781 233 38 72 chr13 69059063 69059146 -51225166 - Lx9 LINE L1 -5 7639 7552 7 1111 2650 43 9 30 chr13 69059146 69059479 -51224833 + L1Md_F3 LINE L1 6259 6584 0 7 1111 781 233 38 72 chr13 69059479 69059659 -51224653 - Lx9 LINE L1 -93 7551 7385 7 1111 967 286 71 19 chr13 69060044 69060452 -51223860 + RMER15 LTR ERVL 2 547 -28 7 1111 282 250 15 15 chr13 69060979 69061044 -51223268 - ID4_ SINE ID -18 65 1 7 1111 2393 71 52 61 chr13 69063909 69064239 -51220073 - ORR1A2 LTR MaLR 0 327 1 8 1111 370 306 62 28 chr13 69064316 69064494 -51219818 + Tigger5 DNA MER2_type 51 234 -2172 8 1111 717 238 128 0 chr13 69064619 69064791 -51219521 + MTEa LTR MaLR 5 198 -181 8 1111 225 132 0 0 chr13 69064795 69064833 -51219479 + (CAT)n Simple_repeat Simple_repeat 3 40 0 8 1111 246 306 0 0 chr13 69064846 69064918 -51219394 + (TATATG)n Simple_repeat Simple_repeat 4 75 0 8 1111 515 286 24 36 chr13 69064989 69065156 -51219156 + MTEa LTR MaLR 215 379 0 8 1111 225 0 0 0 chr13 69065977 69066002 -51218310 + (CCA)n Simple_repeat Simple_repeat 1 25 0 8 1111 1236 279 46 42 chr13 69066003 69066456 -51217856 - RMER5 LTR ERV1 -8 526 72 8 1111 1111 87 0 28 chr13 69066844 69066986 -51217326 + B1_Mus2 SINE Alu 1 138 -9 8 1111 1359 67 0 0 chr13 69066986 69067165 -51217147 + (GA)n Simple_repeat Simple_repeat 2 180 0 8 1111 641 24 24 0 chr13 69067165 69067247 -51217065 + (GAAA)n Simple_repeat Simple_repeat 3 86 0 8 1111 1051 181 155 34 chr13 69067930 69068221 -51216091 - Lx9 LINE L1 -4 7640 7315 9 1111 473 312 60 86 chr13 69068389 69068691 -51215621 + ORR1E LTR MaLR 7 344 -35 9 1111 218 182 0 0 chr13 69070803 69070847 -51213465 + C-rich Low_complexity Low_complexity 1 44 0 9 1111 431 233 93 7 chr13 69071720 69071871 -51212441 + Lx9 LINE L1 7384 7547 -97 9 1111 246 234 166 40 chr13 69072489 69072640 -51211672 - L1M LINE L1 -701 5423 5254 9 1111 838 198 14 66 chr13 69072948 69073159 -51211153 - Lx7 LINE L1 -335 7361 7162 9 1111 264 352 168 15 chr13 69074649 69074845 -51209467 + Lx8 LINE L1 7105 7330 -143 9 1112 2309 160 65 3 chr13 69075606 69075975 -51208337 - ORR1B1 LTR MaLR -2 392 1 9 1112 2713 63 146 0 chr13 69076078 69076427 -51207885 + MTB LTR MaLR 1 400 0 9 1112 201 74 0 0 chr13 69076835 69076862 -51207450 + (A)n Simple_repeat Simple_repeat 1 27 0 9 1112 415 313 0 25 chr13 69077121 69077239 -51207073 - PB1D10 SINE Alu -1 116 2 1 1112 556 304 149 0 chr13 69077268 69077449 -51206863 - B3 SINE B2 -6 210 3 1 1112 344 279 93 10 chr13 69077473 69077749 -51206563 + L1MEc LINE L1 2248 2541 -3778 1 1112 722 205 0 0 chr13 69077787 69077909 -51206403 + B3A SINE B2 22 143 -55 1 1112 260 27 0 26 chr13 69077931 69077969 -51206343 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1112 420 143 0 0 chr13 69079187 69079257 -51205055 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 1112 2478 46 0 0 chr13 69079514 69079828 -51204484 + L1_Mus1 LINE L1 6284 6567 0 1 1112 489 92 0 0 chr13 69082529 69082605 -51201707 + (TCTCTG)n Simple_repeat Simple_repeat 2 77 0 1 1112 330 115 0 0 chr13 69082605 69082657 -51201655 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1112 340 288 8 48 chr13 69082732 69082856 -51201456 - RMER12 LTR ERVK -471 851 733 1 1112 188 368 7 35 chr13 69083141 69083282 -51201030 - L2 LINE L2 -830 2589 2453 1 1112 1393 182 0 39 chr13 69084936 69085170 -51199142 - URR1B DNA MER1_type 0 225 1 1 1112 1101 226 110 24 chr13 69086004 69086294 -51198018 + ORR1E LTR MaLR 45 359 0 1 1112 23 0 0 0 chr13 69088968 69088991 -51195321 + AT_rich Low_complexity Low_complexity 1 23 0 1 1112 778 233 49 38 chr13 69088995 69089178 -51195134 + B3 SINE B2 2 186 -30 1 1112 351 0 0 0 chr13 69089183 69089222 -51195090 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1112 3458 59 33 7 chr13 69089252 69089676 -51194636 - L1Md_F2 LINE L1 -5 6577 6143 1 1112 321 138 92 0 chr13 69090545 69090610 -51193702 - HAL1-3A_ME LINE L1 -813 2045 1975 1 1112 774 207 0 0 chr13 69090610 69090789 -51193523 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1112 718 198 109 0 chr13 69090853 69091045 -51193267 - Lx9 LINE L1 -9 7635 7423 1 1112 25 0 0 0 chr13 69091900 69091925 -51192387 + AT_rich Low_complexity Low_complexity 1 25 0 1 1112 3523 135 48 9 chr13 69093111 69093648 -51190664 + Lx2 LINE L1 6439 6996 -1 1 1112 522 294 119 18 chr13 69093822 69094099 -51190213 - MLT2C1 LTR ERVL -80 317 13 1 1112 648 38 0 0 chr13 69096020 69096099 -51188213 + (TGGA)n Simple_repeat Simple_repeat 2 80 0 1 1112 222 295 82 0 chr13 69096110 69096171 -51188141 - ID4 SINE ID -3 80 15 1 1112 372 294 133 16 chr13 69096765 69097012 -51187300 - Lx9 LINE L1 0 7473 7187 1 1112 592 261 211 40 chr13 69097271 69097445 -51186867 + MTEa LTR MaLR 1 200 -179 1 1112 648 0 0 0 chr13 69097445 69097517 -51186795 + (TC)n Simple_repeat Simple_repeat 1 72 0 1 1112 592 261 211 40 chr13 69097517 69097665 -51186647 + MTEa LTR MaLR 201 377 -2 1 1112 683 272 125 10 chr13 69098866 69099163 -51185149 + MER82 DNA MER2_type 1 331 -322 1 1112 323 292 190 40 chr13 69099208 69099408 -51184904 + MER82 DNA MER2_type 405 634 -19 1 1112 21 0 0 0 chr13 69099727 69099748 -51184564 + AT_rich Low_complexity Low_complexity 1 21 0 1 1112 261 0 0 0 chr13 69100489 69100518 -51183794 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1112 1283 48 0 0 chr13 69101340 69101487 -51182825 + B1_Mm SINE Alu 1 147 0 1 1112 294 95 0 0 chr13 69101487 69101529 -51182783 + (GAAAA)n Simple_repeat Simple_repeat 3 44 0 1 1112 315 71 0 0 chr13 69101659 69101701 -51182611 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1112 1453 28 22 17 chr13 69102337 69102518 -51181794 + L1Md_F3 LINE L1 6401 6582 -2 1 1112 394 345 46 39 chr13 69103396 69103833 -51180479 - L1MEc LINE L1 -1128 5191 4752 1 1112 288 0 0 0 chr13 69103970 69104002 -51180310 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1112 624 27 0 0 chr13 69104002 69104075 -51180237 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 1112 228 259 0 36 chr13 69104290 69104346 -51179966 - L1MEc LINE L1 -1661 4658 4605 1 1112 459 309 96 90 chr13 69104785 69105440 -51178872 - L1MC LINE L1 -1961 4185 3527 1 1112 300 335 132 65 chr13 69105601 69105926 -51178386 - ORR1E LTR MaLR -4 355 9 1 1112 725 325 111 30 chr13 69105934 69106710 -51177602 - L1MEc LINE L1 -2784 3535 2677 1 1112 241 316 138 31 chr13 69106960 69107221 -51177091 - L1MEc LINE L1 -6058 342 54 1 1112 284 278 117 68 chr13 69108185 69108287 -51176025 + MLT1A LTR MaLR 187 290 -84 1 1112 486 0 0 0 chr13 69108287 69108341 -51175971 + (GA)n Simple_repeat Simple_repeat 1 54 0 1 1112 284 278 117 68 chr13 69108341 69108400 -51175912 + MLT1A LTR MaLR 291 356 -18 1 1112 552 30 0 0 chr13 69108544 69108610 -51175702 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1112 1327 102 5 5 chr13 69108668 69108856 -51175456 + B2_Mm2 SINE B2 4 191 -4 1 1112 1230 87 0 0 chr13 69109237 69109410 -51174902 + (GGAA)n Simple_repeat Simple_repeat 4 176 0 1 1112 619 175 24 18 chr13 69109412 69109581 -51174731 + GA-rich Low_complexity Low_complexity 2 171 0 1 1112 779 247 34 71 chr13 69109819 69110085 -51174227 + MTEa LTR MaLR 6 261 -118 1 1112 241 343 30 48 chr13 69111194 69111348 -51172964 + MIR SINE MIR 2 155 -107 1 1112 332 294 108 32 chr13 69111627 69111785 -51172527 + ID_B1 SINE B4 49 218 -6 1 1112 254 241 101 0 chr13 69111759 69111838 -51172474 + B4 SINE B4 195 281 -11 1 1112 336 305 35 66 chr13 69113467 69113695 -51170617 + MLT1B LTR MaLR 1 221 -169 1 1112 226 87 21 21 chr13 69114450 69114497 -51169815 + (CAA)n Simple_repeat Simple_repeat 1 47 0 1 1112 2293 120 3 0 chr13 69114586 69114912 -51169400 + ORR1A2 LTR MaLR 1 327 0 1 1112 2108 116 0 0 chr13 69116121 69116422 -51167890 - L1_Mur2 LINE L1 -95 5782 5482 1 1112 3270 152 88 3 chr13 69116422 69116887 -51167425 + Lx4A LINE L1 6442 6928 -130 1 1112 314 74 19 0 chr13 69116887 69116941 -51167371 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1112 3270 152 88 3 chr13 69116941 69117042 -51167270 + Lx4A LINE L1 6929 7055 -3 1 1112 213 98 46 62 chr13 69117042 69117107 -51167205 + (TAAA)n Simple_repeat Simple_repeat 1 64 0 1 1112 21 36 0 0 chr13 69118293 69118321 -51165991 + AT_rich Low_complexity Low_complexity 1 28 0 1 1112 735 168 174 0 chr13 69118322 69118512 -51165800 - Lx9 LINE L1 -1 7643 7421 1 1112 471 79 0 0 chr13 69118611 69118674 -51165638 - L1_Mm LINE L1 -391 5492 5430 1 1112 4279 152 27 12 chr13 69118672 69119501 -51164811 + Lx4B LINE L1 5478 6324 -734 1 1112 598 166 133 33 chr13 69119521 69119702 -51164610 + Lx4B LINE L1 6851 7049 -9 1 1112 504 0 0 0 chr13 69119864 69119920 -51164392 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1112 483 230 31 16 chr13 69120497 69120625 -51163687 + L1MA7 LINE L1 6032 6161 -130 1 1112 586 252 35 14 chr13 69120627 69120768 -51163544 + B1F2 SINE Alu 1 144 -5 1 1112 1090 81 0 0 chr13 69120779 69120927 -51163385 + B1_Mus1 SINE Alu 1 148 0 1 1112 344 237 68 88 chr13 69120957 69121105 -51163207 + L1MA7 LINE L1 6146 6290 -1 1 1112 216 0 0 0 chr13 69121604 69121628 -51162684 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1112 807 142 0 0 chr13 69121891 69122025 -51162287 + (GGA)n Simple_repeat Simple_repeat 2 135 0 1 1112 621 82 0 0 chr13 69122321 69122418 -51161894 + (TC)n Simple_repeat Simple_repeat 1 97 0 1 1112 35 24 0 0 chr13 69123944 69123986 -51160326 + AT_rich Low_complexity Low_complexity 1 42 0 1 1112 995 300 50 23 chr13 69124102 69124501 -51159811 - Lx8 LINE L1 -135 7338 6929 1 1112 517 193 35 0 chr13 69124513 69124658 -51159654 + (TA)n Simple_repeat Simple_repeat 1 150 0 1 1112 507 33 0 0 chr13 69125499 69125560 -51158752 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 1 1112 214 254 55 0 chr13 69126496 69126551 -51157761 + ID SINE ID 23 80 -144 1 1112 581 180 138 15 chr13 69127407 69127537 -51156775 + B3 SINE B2 41 186 -30 1 1112 414 57 0 0 chr13 69127537 69127590 -51156722 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1112 368 211 138 0 chr13 69128055 69128164 -51156148 + ID_B1 SINE B4 101 224 0 1 1112 266 186 14 14 chr13 69128166 69128237 -51156075 + A-rich Low_complexity Low_complexity 5 75 0 1 1112 708 268 80 134 chr13 69128283 69128671 -51155641 - MTE2a LTR MaLR -5 374 8 1 1112 183 129 0 0 chr13 69128778 69128809 -51155503 + (TAA)n Simple_repeat Simple_repeat 1 31 0 1 1112 284 247 39 0 chr13 69128881 69128958 -51155354 - Tigger5 DNA MER2_type -4 2402 2323 1 1112 251 361 66 28 chr13 69129018 69129200 -51155112 - Tigger5 DNA MER2_type -2200 206 18 1 1112 1262 122 21 0 chr13 69129278 69129466 -51154846 + B2_Mm2 SINE B2 2 193 -2 1 1112 419 245 9 28 chr13 69130123 69130232 -51154080 + B1_Mur3 SINE Alu 33 139 -10 1 1112 504 72 0 0 chr13 69130234 69130303 -51154009 + (CAAG)n Simple_repeat Simple_repeat 2 70 0 1 1112 221 218 0 13 chr13 69130588 69130667 -51153645 + (TG)n Simple_repeat Simple_repeat 2 79 0 1 1112 399 215 0 0 chr13 69130683 69130804 -51153508 + (TG)n Simple_repeat Simple_repeat 2 122 0 1 1112 210 143 29 0 chr13 69130804 69130839 -51153473 + CT-rich Low_complexity Low_complexity 4 39 0 1 1112 215 61 30 0 chr13 69131021 69131054 -51153258 + (GA)n Simple_repeat Simple_repeat 2 35 0 1 1112 31 44 0 0 chr13 69131489 69131534 -51152778 + AT_rich Low_complexity Low_complexity 1 45 0 1 1112 231 299 92 0 chr13 69132907 69132994 -51151318 + MIR SINE MIR 51 145 -63 1 1112 450 306 38 19 chr13 69134817 69135027 -51149285 - ID_B1 SINE B4 -10 214 1 1 1112 375 242 266 0 chr13 69135924 69136048 -51148264 + Lx8 LINE L1 7165 7321 -152 1 1112 197 65 0 31 chr13 69138091 69138123 -51146189 + (CCG)n Simple_repeat Simple_repeat 2 32 0 1 1112 42 106 0 0 chr13 69138345 69138506 -51145806 + GC_rich Low_complexity Low_complexity 1 161 0 1 1112 271 342 70 9 chr13 69141299 69141414 -51142898 + MER45A DNA Tip100 56 177 -1 1 1112 659 266 193 0 chr13 69142204 69142520 -51141792 + MTE2b LTR MaLR 3 379 0 1 1112 2861 137 47 8 chr13 69143336 69143805 -51140507 + RLTR20A2 LTR ERVK 1 489 -89 1 1112 558 0 0 0 chr13 69143805 69143867 -51140445 + (TG)n Simple_repeat Simple_repeat 2 63 0 1 1112 2861 137 47 8 chr13 69143867 69143890 -51140422 + RLTR20A2 LTR ERVK 490 512 -66 1 1112 663 57 0 0 chr13 69143957 69144045 -51140267 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 1 1112 234 0 0 0 chr13 69144932 69144958 -51139354 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1112 702 0 0 0 chr13 69148330 69148408 -51135904 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 1112 605 239 56 7 chr13 69150139 69150282 -51134030 + RSINE1 SINE B4 3 152 -13 1 1112 346 186 23 0 chr13 69150282 69150368 -51133944 + CT-rich Low_complexity Low_complexity 1 88 0 1 1112 246 62 0 0 chr13 69150376 69150408 -51133904 + (GA)n Simple_repeat Simple_repeat 1 32 0 2 1112 22 56 0 0 chr13 69150764 69150800 -51133512 + AT_rich Low_complexity Low_complexity 1 36 0 2 1112 320 371 9 0 chr13 69150810 69150926 -51133386 - PB1 SINE Alu -8 119 3 2 1112 805 107 15 0 chr13 69150961 69151092 -51133220 + (TTC)n Simple_repeat Simple_repeat 3 135 0 2 1112 353 331 0 8 chr13 69151094 69151225 -51133087 + (TATATG)n Simple_repeat Simple_repeat 5 134 0 2 1112 670 278 43 100 chr13 69151243 69151543 -51132769 - B4 SINE B4 -8 284 2 2 1112 582 28 0 0 chr13 69151656 69151728 -51132584 + (TC)n Simple_repeat Simple_repeat 1 72 0 2 1112 324 0 0 0 chr13 69151745 69151781 -51132531 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1112 1204 316 42 23 chr13 69154212 69154691 -51129621 - Lx8 LINE L1 -370 7103 6616 2 1112 189 0 0 0 chr13 69157006 69157027 -51127285 + (TA)n Simple_repeat Simple_repeat 1 21 0 2 1112 22 35 0 0 chr13 69157491 69157520 -51126792 + AT_rich Low_complexity Low_complexity 1 29 0 2 1112 1701 129 104 9 chr13 69157837 69158165 -51126147 - ORR1B2 LTR MaLR -8 359 1 2 1112 220 200 0 0 chr13 69158246 69158291 -51126021 + GA-rich Low_complexity Low_complexity 1 45 0 2 1112 1455 215 150 42 chr13 69158521 69159049 -51125263 - RMER4B LTR ERVK 0 585 1 2 1112 517 343 32 24 chr13 69160857 69161108 -51123204 - B4A SINE B4 0 292 40 2 1112 1276 189 122 25 chr13 69162777 69163098 -51121214 - ORR1B1 LTR MaLR 0 394 43 2 1112 612 307 54 64 chr13 69163841 69164137 -51120175 - Charlie1a DNA MER1_type -246 1209 917 2 1112 333 0 0 0 chr13 69164140 69164177 -51120135 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1112 324 169 0 0 chr13 69164177 69164254 -51120058 + GA-rich Low_complexity Low_complexity 2 78 0 2 1112 399 276 72 7 chr13 69164546 69164699 -51119613 + L1MA4 LINE L1 5770 5932 -368 2 1112 564 106 0 0 chr13 69164710 69164795 -51119517 + (TG)n Simple_repeat Simple_repeat 1 85 0 2 1112 341 326 88 73 chr13 69165509 69165687 -51118625 + L1ME2 LINE L1 5427 5600 -562 2 1112 818 291 27 98 chr13 69165687 69166095 -51118217 - MTE2a LTR MaLR 0 379 1 2 1112 341 339 82 34 chr13 69166095 69166335 -51117977 + L1ME2 LINE L1 5601 5855 -309 2 1112 243 235 35 12 chr13 69166467 69166553 -51117759 + L1ME2 LINE L1 6067 6154 -8 2 1112 226 346 12 12 chr13 69167412 69167494 -51116818 - ID4_ SINE ID 0 83 2 2 1112 315 0 0 0 chr13 69167561 69167596 -51116716 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1112 29 0 0 0 chr13 69167686 69167715 -51116597 + AT_rich Low_complexity Low_complexity 1 29 0 2 1112 216 0 0 0 chr13 69168024 69168048 -51116264 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 2 1112 244 350 10 10 chr13 69168057 69168155 -51116157 - Lx8 LINE L1 -363 7110 7013 2 1112 405 0 0 0 chr13 69168702 69168747 -51115565 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1112 292 270 135 0 chr13 69169581 69169670 -51114642 + L1MA4 LINE L1 5693 5793 -507 2 1112 254 182 15 0 chr13 69169684 69169750 -51114562 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1112 372 287 27 1 chr13 69169757 69169887 -51114425 + L1MA4 LINE L1 5779 5917 -383 2 1112 408 155 0 0 chr13 69169904 69169975 -51114337 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1112 461 310 28 0 chr13 69170250 69170392 -51113920 - B1F1 SINE Alu -3 146 1 2 1112 180 0 0 0 chr13 69170671 69170691 -51113621 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 1112 373 278 61 6 chr13 69170740 69170903 -51113409 + L1MC1 LINE L1 4756 4927 -1219 2 1112 225 176 13 26 chr13 69171001 69171077 -51113235 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 1112 956 251 178 7 chr13 69171100 69171409 -51112903 - ORR1D2 LTR MaLR -8 362 1 2 1112 265 226 59 12 chr13 69171409 69171494 -51112818 + L1MC1 LINE L1 5076 5164 -982 2 1112 234 156 0 0 chr13 69171565 69171610 -51112702 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1112 477 148 0 0 chr13 69171651 69171732 -51112580 + (GGGAA)n Simple_repeat Simple_repeat 4 84 0 2 1112 512 116 12 0 chr13 69171727 69171813 -51112499 + (GA)n Simple_repeat Simple_repeat 2 88 0 2 1112 283 271 62 0 chr13 69171852 69171974 -51112338 - L1M2 LINE L1 -873 5270 5118 2 1112 525 80 0 0 chr13 69171993 69172068 -51112244 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 1112 351 325 119 41 chr13 69172331 69172674 -51111638 + L1MC1 LINE L1 5329 5698 -635 2 1112 254 277 157 0 chr13 69172703 69172786 -51111526 + Tigger5 DNA MER2_type 41 136 -2270 2 1112 921 302 152 14 chr13 69172953 69173524 -51110788 + L1MC1 LINE L1 5684 6333 0 2 1112 437 304 83 47 chr13 69173804 69173816 -51110496 - B3A SINE B2 -5 193 185 2 1112 495 0 0 0 chr13 69173816 69173871 -51110441 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1112 437 304 83 47 chr13 69173871 69174027 -51110285 - B3A SINE B2 -14 184 19 2 1112 758 161 96 6 chr13 69174191 69174347 -51109965 + Lx4B LINE L1 6593 6762 -296 2 1112 747 185 89 11 chr13 69174348 69174528 -51109784 + Lx4B LINE L1 6865 7058 0 2 1112 468 0 0 0 chr13 69174604 69174656 -51109656 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1112 519 60 0 0 chr13 69176777 69176844 -51107468 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 2 1112 274 343 67 7 chr13 69177346 69177481 -51106831 - MLT1A0 LTR MaLR -222 143 1 2 1112 3878 14 0 0 chr13 69178490 69178924 -51105388 + L1Md_T LINE L1 5153 5586 -297 2 1112 8502 59 0 0 chr13 69178924 69179920 -51104392 + L1Md_T LINE L1 5587 6582 0 2 1112 295 239 136 19 chr13 69181659 69181821 -51102491 - Tigger7 DNA MER2_type -33 2458 2278 2 1112 358 369 47 35 chr13 69181819 69182075 -51102237 - Tigger7 DNA MER2_type -2162 329 71 2 1112 744 246 11 60 chr13 69182323 69182548 -51101764 + ORR1C2 LTR MaLR 156 377 -7 2 1112 2396 189 27 2 chr13 69183195 69183603 -51100709 - Lx5 LINE L1 0 7050 6633 2 1112 1825 162 0 0 chr13 69183603 69183886 -51100426 - Lx5 LINE L1 -559 6491 6209 2 1112 4328 138 54 7 chr13 69183885 69184925 -51099387 + Lx5 LINE L1 5125 6216 -834 2 1112 2950 65 72 11 chr13 69187031 69187407 -51096905 + MTB LTR MaLR 1 399 -1 2 1112 4585 101 8 2 chr13 69188792 69189407 -51094905 - L1_Mus3 LINE L1 -2 6636 6018 2 1112 1264 144 114 0 chr13 69190026 69190227 -51094085 + URR1A DNA MER1_type 2 225 -1 2 1112 257 27 54 0 chr13 69190310 69190347 -51093965 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1112 1952 165 45 23 chr13 69190849 69191203 -51093109 - MTC LTR MaLR -59 362 1 2 1112 303 211 50 40 chr13 69191263 69191362 -51092950 - Lx6 LINE L1 -47 7413 7314 2 1112 228 311 67 6 chr13 69191964 69192129 -51092183 + L1MC5 LINE L1 6990 7164 -797 2 1112 180 0 0 0 chr13 69192579 69192599 -51091713 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 1112 325 315 35 82 chr13 69193385 69193617 -51090695 + MER63D DNA AcHobo 93 313 -748 2 1112 727 208 174 23 chr13 69193674 69193846 -51090466 + MTD LTR MaLR 207 404 -15 2 1112 1921 250 72 71 chr13 69193893 69194722 -51089590 + MTD-int LTR MaLR 4 848 -250 2 1112 198 0 0 0 chr13 69194722 69194744 -51089568 + (ATTTG)n Simple_repeat Simple_repeat 3 24 0 2 1112 1890 284 72 97 chr13 69194744 69195033 -51089279 + MTD-int LTR MaLR 849 1094 -4 2 1112 1642 210 80 35 chr13 69195042 69195408 -51088904 + MTD LTR MaLR 3 387 -32 2 1112 243 0 0 0 chr13 69195408 69195435 -51088877 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2 1112 1642 210 80 35 chr13 69195435 69195467 -51088845 + MTD LTR MaLR 388 419 0 2 1112 180 357 40 10 chr13 69195917 69196016 -51088296 - MIRb SINE MIR -20 248 147 2 1112 429 132 40 81 chr13 69197849 69197948 -51086364 - B2_Mm1a SINE B2 -4 189 95 2 1112 1174 54 0 0 chr13 69197937 69198084 -51086228 - B2_Mm1a SINE B2 -44 149 3 2 1112 486 0 0 0 chr13 69198391 69198445 -51085867 + (TC)n Simple_repeat Simple_repeat 2 55 0 2 1112 540 0 0 0 chr13 69198446 69198506 -51085806 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1112 202 296 0 40 chr13 69198506 69198580 -51085732 + L2a LINE L2 3110 3180 -246 2 1112 230 224 39 26 chr13 69198859 69198937 -51085375 - L1MC5 LINE L1 -91 7870 7792 2 1112 1471 325 61 22 chr13 69202777 69203401 -51080911 - Lx9 LINE L1 -213 7431 6784 2 1112 48 32 0 0 chr13 69204818 69204880 -51079432 + AT_rich Low_complexity Low_complexity 1 62 0 2 1112 1427 274 128 23 chr13 69204909 69205440 -51078872 - Lx8 LINE L1 -50 7423 6837 2 1113 330 26 0 0 chr13 69206244 69206283 -51078029 + (TAGA)n Simple_repeat Simple_repeat 2 40 0 2 1113 297 0 0 0 chr13 69206468 69206501 -51077811 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1113 209 205 0 0 chr13 69207147 69207186 -51077126 + (CATATA)n Simple_repeat Simple_repeat 1 39 0 2 1113 533 311 80 61 chr13 69208572 69208884 -51075428 - MLT1C LTR MaLR -18 449 132 2 1113 394 250 0 81 chr13 69209389 69209472 -51074840 + RMER17C LTR ERVK 1 83 -327 2 1113 608 0 0 14 chr13 69209472 69209545 -51074767 + (TC)n Simple_repeat Simple_repeat 2 73 0 2 1113 394 250 0 81 chr13 69209545 69209635 -51074677 + RMER17C LTR ERVK 84 160 -250 2 1113 315 165 0 0 chr13 69209681 69209766 -51074546 + (CTGGGG)n Simple_repeat Simple_repeat 6 90 0 2 1113 378 242 111 0 chr13 69209767 69209866 -51074446 + RMER17C LTR ERVK 301 410 0 2 1113 790 269 6 0 chr13 69210317 69210488 -51073824 - B3 SINE B2 -44 172 1 2 1113 2961 106 42 27 chr13 69210500 69210947 -51073365 - Lx2A LINE L1 0 7008 6555 2 1113 3058 18 0 0 chr13 69211035 69211458 -51072854 + RLTR1B-int LTR ERV1 2525 3026 -273 2 1113 327 339 66 44 chr13 69212114 69212296 -51072016 + ORR1E LTR MaLR 5 190 -169 2 1113 302 330 80 46 chr13 69212832 69213134 -51071178 - L1MC LINE L1 -2199 3947 3636 2 1113 387 305 39 7 chr13 69213249 69213404 -51070908 + Lx9 LINE L1 7313 7472 -172 2 1113 22 0 0 0 chr13 69213510 69213532 -51070780 + AT_rich Low_complexity Low_complexity 1 22 0 2 1113 2122 188 41 24 chr13 69213603 69214018 -51070294 + Lx2B LINE L1 6578 6999 -1 2 1113 226 302 89 76 chr13 69214291 69214832 -51069480 - L1M5 LINE L1 -3000 3146 2599 2 1113 1345 231 56 25 chr13 69214958 69215317 -51068995 + ORR1D2 LTR MaLR 1 370 0 2 1113 314 0 49 0 chr13 69215554 69215595 -51068717 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2 1113 1154 73 0 0 chr13 69215595 69215731 -51068581 - B1_Mus1 SINE Alu -12 136 1 2 1113 796 293 18 42 chr13 69215857 69216074 -51068238 - B4 SINE B4 -79 213 2 2 1113 312 271 56 32 chr13 69216182 69216308 -51068004 - L1M4b LINE L1 -1387 5619 5491 2 1113 211 373 16 48 chr13 69216380 69216504 -51067808 + B4 SINE B4 31 150 -142 2 1113 324 313 40 87 chr13 69216442 69216568 -51067744 + B1F SINE Alu 5 124 -3 2 1113 369 259 59 33 chr13 69216867 69217019 -51067293 - L1M4b LINE L1 -1821 5185 5030 2 1113 888 282 115 20 chr13 69217118 69217614 -51066698 - L1M4b LINE L1 -2313 4693 4151 2 1113 241 223 40 24 chr13 69217644 69217768 -51066544 + CT-rich Low_complexity Low_complexity 2 127 0 2 1113 3841 58 15 6 chr13 69217866 69218334 -51065978 - L1Md_F2 LINE L1 0 6582 6111 2 1113 1216 87 6 0 chr13 69218334 69218495 -51065817 + L1Md_F2 LINE L1 5950 6111 -471 2 1113 36913 6 1 0 chr13 69218541 69224907 -51059405 - L1Md_A LINE L1 -1 6581 214 3 1113 321 225 207 6 chr13 69224984 69225158 -51059154 - L1M4b LINE L1 -4099 3235 3027 2 1113 236 308 116 47 chr13 69225407 69225639 -51058673 + LTR55 LTR ERV 130 377 -171 3 1113 738 60 0 0 chr13 69225860 69225960 -51058352 + (TC)n Simple_repeat Simple_repeat 2 101 0 3 1113 1317 225 107 13 chr13 69226029 69226421 -51057891 + Lx9 LINE L1 7058 7486 -158 3 1113 3438 62 12 2 chr13 69226936 69227339 -51056973 - MTB_Mm LTR MaLR 0 407 1 3 1113 239 238 61 24 chr13 69227779 69227861 -51056451 - Lx7 LINE L1 0 7696 7612 3 1113 216 0 0 0 chr13 69227895 69227919 -51056393 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 1113 342 0 0 0 chr13 69227969 69228007 -51056305 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1113 1246 301 22 20 chr13 69228052 69228456 -51055856 - Lx7 LINE L1 -389 7307 6903 3 1113 666 215 0 8 chr13 69228454 69228585 -51055727 - Lx7 LINE L1 -1437 6259 6130 3 1113 1010 126 6 6 chr13 69228585 69228760 -51055552 + Lx4A LINE L1 5940 6114 -944 3 1113 1763 213 71 42 chr13 69228753 69229028 -51055284 + L1_Mur3 LINE L1 5284 5576 -304 3 1113 2160 143 38 0 chr13 69229028 69229343 -51054969 + ORR1A2 LTR MaLR 1 327 0 3 1113 1763 213 71 42 chr13 69229343 69229473 -51054839 + L1_Mur3 LINE L1 5577 5701 -179 3 1113 2213 266 75 14 chr13 69229739 69230388 -51053924 + Lx9 LINE L1 6161 6849 -795 3 1113 890 283 98 16 chr13 69230605 69230860 -51053452 + B4A SINE B4 7 282 -10 3 1113 304 283 12 7 chr13 69230975 69231071 -51053241 - L1M2 LINE L1 -2120 5762 5670 3 1113 235 278 19 0 chr13 69231384 69231438 -51052874 - RSINE1 SINE B4 -108 57 3 3 1113 305 311 146 0 chr13 69231453 69231556 -51052756 - PB1 SINE Alu -3 124 7 3 1113 348 111 0 0 chr13 69231579 69231633 -51052679 + (TCTG)n Simple_repeat Simple_repeat 3 56 0 3 1113 29 0 0 0 chr13 69232323 69232352 -51051960 + AT_rich Low_complexity Low_complexity 1 29 0 3 1113 1352 111 21 0 chr13 69232410 69232600 -51051712 + B2_Mm2 SINE B2 2 195 0 3 1113 888 118 0 0 chr13 69232623 69232759 -51051553 + (GAAA)n Simple_repeat Simple_repeat 1 136 0 3 1113 236 175 0 0 chr13 69232970 69233010 -51051302 + Lx5 LINE L1 6646 6685 -365 3 1113 3125 263 70 17 chr13 69233018 69233678 -51050634 - Lx7 LINE L1 -668 7028 6319 3 1113 450 0 0 0 chr13 69233678 69233728 -51050584 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1113 3125 263 70 17 chr13 69233728 69233933 -51050379 - Lx7 LINE L1 -1378 6318 6118 3 1113 501 284 79 22 chr13 69233922 69234149 -51050163 + Lx7 LINE L1 7171 7410 -286 3 1113 34497 70 1 16 chr13 69234284 69239474 -51044838 + L1Md_F2 LINE L1 478 5586 -297 3 1113 8678 46 2 2 chr13 69239474 69240470 -51043842 + L1Md_F2 LINE L1 5587 6582 0 3 1113 629 274 10 38 chr13 69241013 69241222 -51043090 + Lx7 LINE L1 6095 6297 -1399 3 1113 28 0 0 26 chr13 69241481 69241502 -51042810 + AT_rich Low_complexity Low_complexity 1 21 0 3 1113 1239 68 0 0 chr13 69241502 69241649 -51042663 - B1_Mus1 SINE Alu 0 148 2 3 1113 28 0 0 26 chr13 69241649 69241666 -51042646 + AT_rich Low_complexity Low_complexity 1 17 0 3 1113 482 371 0 36 chr13 69241834 69241999 -51042313 + RSINE1 SINE B4 1 159 -6 3 1113 21 107 0 0 chr13 69243205 69243289 -51041023 + AT_rich Low_complexity Low_complexity 1 84 0 3 1113 669 323 56 69 chr13 69243572 69243689 -51040623 + Lx8 LINE L1 5910 6034 -1662 3 1113 4549 28 2 0 chr13 69243689 69244185 -51040127 + L1Md_F2 LINE L1 6085 6581 -1 3 1113 938 283 64 65 chr13 69244185 69244377 -51039935 + Lx8 LINE L1 6035 6229 -1244 3 1113 1172 164 84 37 chr13 69244377 69244592 -51039720 + URR1B DNA MER1_type 1 225 0 3 1113 938 272 66 64 chr13 69244592 69244637 -51039675 + Lx8 LINE L1 6230 6273 -1200 3 1113 884 49 182 24 chr13 69244637 69244763 -51039549 + B1_Mus2 SINE Alu 2 147 0 3 1113 938 272 66 64 chr13 69244763 69244943 -51039369 + Lx8 LINE L1 6274 6438 -1035 3 1113 857 291 68 14 chr13 69244942 69245235 -51039077 + Lx8 LINE L1 6604 6912 -561 3 1113 1721 71 107 4 chr13 69245235 69245488 -51038824 + MTB_Mm LTR MaLR 129 407 0 3 1113 807 324 53 49 chr13 69245491 69245942 -51038370 + Lx8 LINE L1 6961 7413 -60 3 1113 293 348 95 79 chr13 69246373 69246622 -51037690 - B4 SINE B4 -60 232 33 3 1113 287 314 126 32 chr13 69246643 69246890 -51037422 + L2a LINE L2 3157 3426 0 3 1113 1223 268 130 25 chr13 69249060 69250065 -51034247 - L1MA4 LINE L1 -192 6108 4996 3 1113 269 295 159 40 chr13 69250418 69250619 -51033693 - L1MA4 LINE L1 -1397 4746 4522 3 1113 240 35 0 0 chr13 69250869 69250898 -51033414 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1113 254 290 0 0 chr13 69251020 69251089 -51033223 + Lx7 LINE L1 7605 7673 -23 3 1113 180 0 0 0 chr13 69251091 69251111 -51033201 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1113 684 294 10 112 chr13 69251415 69251817 -51032495 + L1M2 LINE L1 4534 4894 -1249 3 1113 3055 81 35 18 chr13 69252810 69253210 -51031102 + MTB_Mm LTR MaLR 1 407 0 3 1113 213 333 0 0 chr13 69253879 69253939 -51030373 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1113 1347 230 73 17 chr13 69254357 69254715 -51029597 - Lx9 LINE L1 0 7644 7267 3 1113 406 311 71 45 chr13 69254888 69255043 -51029269 + B4 SINE B4 2 160 -132 3 1113 887 211 17 0 chr13 69255048 69255223 -51029089 + B3 SINE B2 1 178 -38 3 1113 555 279 62 0 chr13 69255529 69255658 -51028654 - ID_B1 SINE B4 -7 217 81 3 1113 2438 279 122 14 chr13 69255787 69256633 -51027679 + Lx8 LINE L1 6414 7350 -123 3 1113 552 216 0 19 chr13 69256663 69256819 -51027493 + G-rich Low_complexity Low_complexity 5 157 0 3 1113 792 81 0 0 chr13 69256784 69256822 -51027490 + (GAA)n Simple_repeat Simple_repeat 1 38 0 3 1113 1518 22 0 0 chr13 69256822 69257000 -51027312 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 3 1113 792 81 0 0 chr13 69257000 69257072 -51027240 + (GAA)n Simple_repeat Simple_repeat 3 74 0 3 1113 552 158 8 0 chr13 69257164 69257284 -51027028 - Lx9 LINE L1 -1 7643 7523 3 1113 1101 68 0 0 chr13 69257637 69257770 -51026542 + B1_Mm SINE Alu 3 135 -12 3 1113 378 0 0 0 chr13 69257770 69257812 -51026500 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 3 1113 247 32 0 0 chr13 69257837 69257868 -51026444 + B1_Mm SINE Alu 105 135 -12 3 1113 522 0 0 0 chr13 69257868 69257926 -51026386 + (TAAA)n Simple_repeat Simple_repeat 1 58 0 3 1113 439 308 60 0 chr13 69259084 69259269 -51025043 - L1M4 LINE L1 -1333 4813 4618 3 1113 338 284 49 0 chr13 69259280 69259361 -51024951 + RSINE1 SINE B4 4 88 -77 3 1113 960 225 102 50 chr13 69259530 69259751 -51024561 - MTD LTR MaLR -13 406 196 3 1113 376 298 0 0 chr13 69259803 69259897 -51024415 - MTD LTR MaLR -219 200 107 3 1113 1579 214 11 81 chr13 69259927 69260309 -51024003 - Lx5 LINE L1 -71 6979 6625 3 1113 519 261 174 60 chr13 69260363 69260680 -51023632 - RLTR16 LTR ERVK -256 436 24 3 1113 267 104 19 94 chr13 69260733 69260892 -51023420 + (TTG)n Simple_repeat Simple_repeat 2 148 0 3 1113 578 123 21 14 chr13 69261679 69261819 -51022493 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 3 1113 215 205 0 0 chr13 69261825 69261864 -51022448 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1113 377 310 57 21 chr13 69261864 69261980 -51022332 - PB1D10 SINE Alu -27 122 6 3 1113 2389 113 121 3 chr13 69262373 69262738 -51021574 - L1_Mus3 LINE L1 0 6638 6231 3 1113 22 0 0 0 chr13 69262841 69262863 -51021449 + AT_rich Low_complexity Low_complexity 1 22 0 3 1113 371 308 153 6 chr13 69262958 69263128 -51021184 - Lx7 LINE L1 -359 7337 7143 3 1113 717 317 23 74 chr13 69263153 69263504 -51020808 - Lx7 LINE L1 -518 7178 6833 3 1113 271 226 23 23 chr13 69264114 69264200 -51020112 + Lx5 LINE L1 6922 7007 -43 3 1113 243 0 0 0 chr13 69264280 69264307 -51020005 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 1113 459 0 0 0 chr13 69264307 69264357 -51019955 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1113 903 105 0 0 chr13 69264822 69264955 -51019357 + (GGA)n Simple_repeat Simple_repeat 3 135 0 3 1113 370 252 99 0 chr13 69265118 69265249 -51019063 + MLT1B LTR MaLR 1 144 -246 3 1113 1503 213 17 38 chr13 69265290 69265637 -51018675 - ORR1B2 LTR MaLR 0 367 28 3 1113 280 273 15 0 chr13 69265852 69265918 -51018394 - ID4_ SINE ID -13 70 4 3 1113 923 246 15 5 chr13 69266798 69266994 -51017318 + B3 SINE B2 9 206 -10 3 1113 363 44 0 0 chr13 69267865 69267910 -51016402 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1113 312 361 0 23 chr13 69268157 69268330 -51015982 + L1MEd LINE L1 883 1051 -5503 3 1113 283 275 77 0 chr13 69268581 69268672 -51015640 + B1F SINE Alu 36 133 -16 3 1113 21 0 0 0 chr13 69268832 69268853 -51015459 + AT_rich Low_complexity Low_complexity 1 21 0 3 1113 239 291 81 28 chr13 69269975 69270163 -51014149 + L1MEd LINE L1 935 1217 -5534 3 1113 449 230 33 58 chr13 69270163 69270283 -51014029 + PB1D7 SINE Alu 3 119 -1 3 1113 225 308 60 43 chr13 69270283 69270328 -51013984 + L1MEd LINE L1 1218 1264 -5487 3 1113 454 287 54 52 chr13 69270762 69270993 -51013319 + L1M2 LINE L1 4781 4985 -901 3 1113 33 25 0 0 chr13 69271090 69271130 -51013182 + AT_rich Low_complexity Low_complexity 1 40 0 3 1113 769 207 11 6 chr13 69272008 69272360 -51011952 + CT-rich Low_complexity Low_complexity 1 354 0 3 1113 367 309 23 68 chr13 69272727 69272859 -51011453 + B4A SINE B4 5 130 -162 3 1113 4303 116 0 17 chr13 69272880 69273477 -51010835 + Lx LINE L1 6068 6654 0 3 1113 448 204 34 123 chr13 69275046 69275225 -51009087 - HAL1-2a_MD LINE L1 -517 2507 2345 3 1113 234 375 11 0 chr13 69275241 69275417 -51008895 + (ATG)n Simple_repeat Simple_repeat 3 180 0 3 1113 407 316 11 53 chr13 69275398 69275585 -51008727 + (ATGGTG)n Simple_repeat Simple_repeat 2 180 0 3 1113 272 48 24 0 chr13 69276015 69276057 -51008255 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 1113 23 0 0 0 chr13 69276648 69276671 -51007641 + AT_rich Low_complexity Low_complexity 1 23 0 3 1113 2433 180 138 87 chr13 69277110 69277688 -51006624 - RMER19C LTR ERVK -3 608 1 3 1113 315 317 38 123 chr13 69277983 69278055 -51006257 - MLT1B LTR MaLR -1 389 323 3 1113 1429 107 0 0 chr13 69278055 69278242 -51006070 + B2_Mm2 SINE B2 1 187 -8 3 1113 315 317 38 123 chr13 69278242 69278381 -51005931 - MLT1B LTR MaLR -68 322 196 3 1113 476 138 0 22 chr13 69278448 69278537 -51005775 + GA-rich Low_complexity Low_complexity 3 89 0 3 1113 249 299 26 0 chr13 69278592 69278669 -51005643 - MLT1B LTR MaLR -295 79 1 3 1113 272 208 130 0 chr13 69279072 69279149 -51005163 + MIR3 SINE MIR 122 208 0 3 1113 946 242 78 21 chr13 69279198 69279481 -51004831 + Lx8 LINE L1 7175 7473 0 3 1113 21 0 0 0 chr13 69279602 69279623 -51004689 + AT_rich Low_complexity Low_complexity 1 21 0 4 1113 265 326 111 12 chr13 69280022 69280308 -51004004 + MLT1C LTR MaLR 6 328 -139 4 1113 24 0 0 0 chr13 69280345 69280369 -51003943 + AT_rich Low_complexity Low_complexity 1 24 0 4 1113 7581 28 0 0 chr13 69280369 69281232 -51003080 - L1Md_T LINE L1 -1 6581 5719 4 1113 998 18 0 0 chr13 69281230 69281341 -51002971 + L1Md_T LINE L1 5596 5706 -177 4 1113 252 287 215 7 chr13 69281498 69281642 -51002670 - MIRb SINE MIR -43 225 52 4 1113 233 345 90 9 chr13 69283131 69283242 -51001070 - ORR1B2 LTR MaLR -176 191 72 4 1113 241 325 93 88 chr13 69284782 69284998 -50999314 + L2 LINE L2 567 783 -2636 4 1113 339 287 99 23 chr13 69285166 69285337 -50998975 - MER53 DNA hAT -4 189 6 4 1113 2353 110 62 28 chr13 69285500 69285856 -50998456 - RLTR9A LTR ERVK 0 368 1 4 1113 284 268 61 10 chr13 69286771 69286869 -50997443 + MER58D DNA MER1_type 284 386 0 4 1113 568 311 33 13 chr13 69286998 69287148 -50997164 - RSINE1 SINE B4 -2 163 11 4 1113 249 267 0 0 chr13 69288687 69288732 -50995580 - RSINE1 SINE B4 -34 131 87 4 1113 192 167 0 0 chr13 69288746 69288776 -50995536 + L2 LINE L2 2397 2426 -993 4 1113 4147 56 19 0 chr13 69288792 69289274 -50995038 - L1_Mus1 LINE L1 0 6567 6077 4 1113 463 206 11 0 chr13 69289277 69289369 -50994943 - RSINE1 SINE B4 -70 95 3 4 1113 246 241 0 0 chr13 69290701 69290759 -50993553 - Charlie5 DNA MER1_type -1311 1313 1256 4 1113 22 0 0 0 chr13 69291091 69291113 -50993199 + AT_rich Low_complexity Low_complexity 1 22 0 4 1113 269 242 106 0 chr13 69291114 69291180 -50993132 - ID4_ SINE ID -4 79 7 4 1113 38436 44 3 3 chr13 69291483 69297897 -50986415 - L1Md_T LINE L1 0 6585 73 4 1113 323 242 116 0 chr13 69298490 69298585 -50985727 + L1MC3 LINE L1 7375 7480 -305 4 1113 953 267 31 155 chr13 69298587 69299014 -50985298 + MTD LTR MaLR 1 375 -44 4 1113 305 248 76 50 chr13 69299023 69299142 -50985170 + L1MC3 LINE L1 7485 7606 -179 4 1113 26 30 0 0 chr13 69299220 69299253 -50985059 + AT_rich Low_complexity Low_complexity 1 33 0 4 1113 1679 139 0 4 chr13 69299393 69299639 -50984673 - Lx3A LINE L1 0 6981 6737 4 1113 3458 69 9 0 chr13 69299639 69300086 -50984226 + Lx3A LINE L1 6266 6716 -265 4 1113 953 267 115 70 chr13 69300615 69300998 -50983314 + MTD LTR MaLR 6 405 -14 4 1113 1075 256 15 70 chr13 69301032 69301359 -50982953 - ORR1E LTR MaLR -47 312 4 4 1113 690 278 118 84 chr13 69302068 69302414 -50981898 + MTEa LTR MaLR 4 361 -18 4 1113 942 265 212 6 chr13 69302461 69302928 -50981384 + L1_Mur3 LINE L1 5238 5800 -80 4 1113 347 309 56 16 chr13 69302970 69303095 -50981217 - MLT1J LTR MaLR -361 151 22 4 1113 288 0 0 0 chr13 69303229 69303261 -50981051 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1113 539 112 0 10 chr13 69303261 69303360 -50980952 + (GA)n Simple_repeat Simple_repeat 1 98 0 4 1113 486 0 0 0 chr13 69303712 69303766 -50980546 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 1113 196 297 40 13 chr13 69306416 69306491 -50977821 + L3b LINE CR1 254 330 -152 4 1113 1775 246 59 25 chr13 69307182 69307778 -50976534 + Lx7 LINE L1 6987 7660 -36 4 1113 2331 78 14 115 chr13 69307778 69308142 -50976170 + ORR1A2 LTR MaLR 1 327 0 4 1113 448 226 42 57 chr13 69308142 69308190 -50976122 + Lx7 LINE L1 7661 7691 -5 4 1113 225 241 0 147 chr13 69309127 69309229 -50975083 + MT2B2 LTR ERVL 171 257 -327 4 1113 499 298 0 0 chr13 69309143 69309274 -50975038 + B1F SINE Alu 19 149 0 4 1113 37229 63 1 27 chr13 69309938 69315780 -50968532 + L1Md_T LINE L1 99 5586 -297 4 1113 8447 60 1 0 chr13 69315780 69316775 -50967537 + L1Md_T LINE L1 5587 6582 0 4 1113 257 325 37 60 chr13 69318234 69318368 -50965944 - LTR33A_ LTR ERVL 0 531 401 4 1113 350 198 58 11 chr13 69319230 69319317 -50964995 + L1MA8 LINE L1 5818 5908 -392 4 1113 726 227 177 0 chr13 69319318 69319516 -50964796 + B4A SINE B4 2 234 -58 4 1113 258 56 0 0 chr13 69319588 69319624 -50964688 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1113 183 80 0 0 chr13 69319651 69319676 -50964636 + (TATG)n Simple_repeat Simple_repeat 2 26 0 4 1113 426 136 0 0 chr13 69319714 69319795 -50964517 + (TATG)n Simple_repeat Simple_repeat 2 82 0 4 1113 348 133 0 0 chr13 69319827 69319887 -50964425 + (GA)n Simple_repeat Simple_repeat 2 61 0 4 1113 4560 72 5 15 chr13 69320128 69320718 -50963594 - L1_Mus3 LINE L1 -2 6636 6053 4 1113 254 270 0 26 chr13 69321009 69321085 -50963227 - L1MC4 LINE L1 -664 7378 7305 4 1113 2721 189 54 65 chr13 69321348 69321960 -50962352 + Lx2B LINE L1 6379 6983 -17 4 1113 220 222 9 83 chr13 69322444 69322552 -50961760 + (GGATG)n Simple_repeat Simple_repeat 4 103 0 4 1113 1251 314 46 15 chr13 69322850 69323251 -50961061 + Lx8 LINE L1 6827 7246 -227 4 1113 2340 113 25 0 chr13 69323251 69323569 -50960743 + ORR1A3 LTR MaLR 1 326 0 4 1113 1251 314 46 15 chr13 69323569 69323646 -50960666 + Lx8 LINE L1 7247 7320 -153 4 1113 342 0 0 0 chr13 69323655 69323693 -50960619 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 1113 406 264 101 67 chr13 69324005 69324188 -50960124 + ORR1E LTR MaLR 4 179 -195 4 1113 486 0 0 0 chr13 69324792 69324846 -50959466 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1113 266 67 0 22 chr13 69326460 69326506 -50957806 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 4 1113 1350 67 0 0 chr13 69326604 69326782 -50957530 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 4 1113 393 250 47 40 chr13 69326957 69327107 -50957205 + RMER15 LTR ERVL 63 213 -362 4 1113 627 236 92 16 chr13 69327148 69327333 -50956979 + RMER15 LTR ERVL 377 575 0 4 1113 1158 92 0 0 chr13 69328783 69328925 -50955387 - B1_Mus1 SINE Alu -5 143 2 4 1113 361 310 57 23 chr13 69330038 69330213 -50954099 - L1M5 LINE L1 -2855 3291 3111 4 1113 200 351 89 9 chr13 69330263 69330375 -50953937 - L2 LINE L2 -510 2909 2789 4 1113 595 217 7 7 chr13 69330748 69330901 -50953411 + CT-rich Low_complexity Low_complexity 3 155 0 4 1113 247 62 83 0 chr13 69331807 69331855 -50952457 + (TAAAA)n Simple_repeat Simple_repeat 3 54 0 4 1113 681 13 0 0 chr13 69332310 69332388 -50951924 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1113 360 347 46 21 chr13 69333288 69333512 -50950800 - MTEb LTR MaLR -126 253 26 4 1113 382 258 41 0 chr13 69333566 69333663 -50950649 + RSINE1 SINE B4 37 137 -28 4 1113 231 253 49 25 chr13 69334646 69334727 -50949585 - MLT1A LTR MaLR -181 193 111 4 1113 690 13 0 0 chr13 69335221 69335300 -50949012 + (TC)n Simple_repeat Simple_repeat 1 79 0 4 1113 252 0 0 0 chr13 69335300 69335327 -50948985 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1113 329 302 98 42 chr13 69335579 69335793 -50948519 + RLTR18 LTR ERVK 33 258 -358 4 1114 2850 73 65 5 chr13 69337186 69337570 -50946742 - MTB_Mm LTR MaLR 0 407 1 4 1114 1061 89 7 0 chr13 69337827 69337973 -50946339 - B1_Mus2 SINE Alu 0 147 1 4 1114 471 35 0 0 chr13 69337998 69338055 -50946257 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1114 399 281 143 33 chr13 69338526 69338798 -50945514 + L1MA7 LINE L1 5953 6254 -37 4 1114 229 260 40 40 chr13 69338820 69338920 -50945392 + PB1D10 SINE Alu 12 111 -6 4 1114 37 52 0 0 chr13 69338964 69339022 -50945290 + AT_rich Low_complexity Low_complexity 1 58 0 4 1114 348 288 80 60 chr13 69339122 69339391 -50944921 + L1MA9 LINE L1 5744 6024 -160 4 1114 1930 115 16 6 chr13 69339394 69339709 -50944603 + ORR1A4 LTR MaLR 1 318 -11 4 1114 334 248 25 33 chr13 69339726 69339847 -50944465 + L1MA9 LINE L1 6049 6168 0 4 1114 234 250 17 0 chr13 69340047 69340107 -50944205 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1114 1171 113 16 0 chr13 69340518 69340703 -50943609 - B2_Mm2 SINE B2 -2 193 6 4 1114 973 340 48 58 chr13 69341657 69342141 -50942171 - Lx8 LINE L1 -459 7014 6536 4 1114 489 17 0 0 chr13 69343014 69343072 -50941240 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1114 791 45 0 35 chr13 69343308 69343424 -50940888 - B2_Mm1a SINE B2 -2 191 80 4 1114 232 414 14 21 chr13 69344463 69344606 -50939706 + MLT1F1 LTR MaLR 305 446 -123 4 1114 374 257 28 56 chr13 69344608 69344715 -50939597 + LSU-rRNA_Hsa rRNA rRNA 1960 2063 -2972 4 1114 549 305 141 8 chr13 69344792 69345222 -50939090 + L1MA8 LINE L1 4947 5442 -858 4 1114 4432 183 56 12 chr13 69345222 69346085 -50938227 + Lx5 LINE L1 6150 7050 0 4 1114 997 291 167 35 chr13 69346130 69346849 -50937463 + L1MA8 LINE L1 5418 6231 -60 4 1114 24 0 0 0 chr13 69347073 69347097 -50937215 + GC_rich Low_complexity Low_complexity 1 24 0 4 1114 1100 205 8 43 chr13 69347562 69347796 -50936516 - URR1A DNA MER1_type 0 226 1 4 1114 406 339 11 55 chr13 69347940 69348121 -50936191 + MTEa LTR MaLR 1 173 -206 4 1114 659 277 145 14 chr13 69349375 69349734 -50934578 - Lx9 LINE L1 -5 7639 7234 4 1114 180 0 0 0 chr13 69349864 69349884 -50934428 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 4 1114 1127 84 7 0 chr13 69349905 69350048 -50934264 + B1_Mus1 SINE Alu 5 148 0 4 1114 205 51 0 49 chr13 69350053 69350094 -50934218 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 4 1114 391 266 53 9 chr13 69351286 69351400 -50932912 + MLT1F1 LTR MaLR 428 546 -23 4 1114 354 45 0 0 chr13 69353076 69353120 -50931192 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1114 2066 104 0 35 chr13 69354118 69354437 -50929875 - L1_Mus4 LINE L1 0 6636 6329 4 1114 448 97 0 18 chr13 69354437 69354512 -50929800 - Lx LINE L1 -428 6226 6156 4 1114 313 279 8 90 chr13 69356536 69356658 -50927654 + PB1D10 SINE Alu 1 112 -5 4 1114 905 160 106 18 chr13 69356701 69356918 -50927394 + Lx9 LINE L1 7406 7641 -3 4 1114 410 322 0 22 chr13 69357114 69357395 -50926917 + (TATG)n Simple_repeat Simple_repeat 1 274 0 4 1114 1219 65 6 6 chr13 69358056 69358227 -50926085 - L1_Mus2 LINE L1 0 6566 6396 4 1114 1508 67 5 20 chr13 69358228 69358426 -50925886 + L1_Mus2 LINE L1 6176 6370 -196 4 1114 246 237 30 30 chr13 69358500 69358600 -50925712 + (TATAA)n Simple_repeat Simple_repeat 3 102 0 4 1114 3206 65 8 0 chr13 69359069 69359466 -50924846 - MTB LTR MaLR 0 400 1 4 1114 1138 88 0 0 chr13 69359707 69359854 -50924458 + B1_Mus2 SINE Alu 1 147 0 5 1114 3610 62 39 4 chr13 69360117 69360584 -50923728 + L1Md_F2 LINE L1 6086 6568 -14 5 1114 713 275 145 6 chr13 69361400 69361779 -50922533 - MLT2B5 LTR ERVL -175 426 1 5 1114 265 239 28 0 chr13 69361859 69361930 -50922382 + LTR52 LTR ERVL 336 408 -13 5 1114 787 320 47 47 chr13 69362621 69362959 -50921353 + MTE2b LTR MaLR 1 338 -41 5 1114 2269 62 3 0 chr13 69363450 69363755 -50920557 + MTB LTR MaLR 95 400 0 5 1114 1612 315 54 17 chr13 69365104 69365644 -50918668 - Lx5 LINE L1 -18 7032 6473 5 1114 2628 218 84 16 chr13 69365637 69366305 -50918007 - Lx5 LINE L1 -687 6363 5651 5 1114 1193 161 0 5 chr13 69366308 69366514 -50917798 - L1_Mur3 LINE L1 -768 5112 4908 5 1114 7714 160 51 4 chr13 69366517 69367910 -50916402 - Lx5 LINE L1 -1403 5647 4184 5 1114 270 317 104 52 chr13 69368576 69368769 -50915543 + L2b LINE L2 3172 3374 -1 5 1114 598 316 57 80 chr13 69370133 69370432 -50913880 + ORR1E LTR MaLR 68 359 0 5 1114 579 15 0 0 chr13 69371984 69372052 -50912260 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 1114 450 306 28 72 chr13 69372073 69372351 -50911961 - B4A SINE B4 -13 279 6 5 1114 431 263 58 0 chr13 69373152 69373289 -50911023 + RLTR40 LTR ERVK 1 145 -672 5 1114 1247 177 84 0 chr13 69373296 69373522 -50910790 - Lx9 LINE L1 -423 7221 6977 5 1114 268 210 37 112 chr13 69373523 69373657 -50910655 + Lx9 LINE L1 7520 7643 -1 5 1114 1222 215 183 79 chr13 69373670 69373879 -50910433 + RLTR40 LTR ERVK 158 417 -400 5 1114 1189 64 0 9 chr13 69373879 69374102 -50910210 + (TG)n Simple_repeat Simple_repeat 1 220 0 5 1114 1222 215 183 79 chr13 69374102 69374420 -50909892 + RLTR40 LTR ERVK 418 739 -78 5 1114 180 238 0 0 chr13 69375958 69376021 -50908291 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1114 467 56 0 14 chr13 69376086 69376158 -50908154 + (CAGAGA)n Simple_repeat Simple_repeat 6 76 0 5 1114 21 0 0 0 chr13 69380186 69380207 -50904105 + AT_rich Low_complexity Low_complexity 1 21 0 5 1114 1165 58 0 0 chr13 69380210 69380349 -50903963 + B1_Mus2 SINE Alu 5 143 -4 5 1114 228 67 0 0 chr13 69380351 69380381 -50903931 + (TAA)n Simple_repeat Simple_repeat 2 31 0 5 1114 926 238 148 3 chr13 69382570 69382894 -50901418 - MTE2b LTR MaLR 0 379 9 5 1114 409 215 0 16 chr13 69382932 69382982 -50901330 + polypurine Low_complexity Low_complexity 1 49 0 5 1114 1257 85 0 0 chr13 69382982 69383158 -50901154 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 5 1114 409 215 0 16 chr13 69383158 69383190 -50901122 + polypurine Low_complexity Low_complexity 50 81 0 5 1114 1245 102 0 0 chr13 69383190 69383543 -50900769 + (GAAA)n Simple_repeat Simple_repeat 1 353 0 5 1114 409 215 0 16 chr13 69383543 69383581 -50900731 + polypurine Low_complexity Low_complexity 82 118 0 5 1114 6623 47 0 35 chr13 69384181 69385042 -50899270 - L1_Mm LINE L1 -1316 4567 3737 5 1114 8402 63 0 2 chr13 69385039 69386073 -50898239 + L1_Mm LINE L1 4553 5586 -297 5 1114 8118 56 1 0 chr13 69386073 69387066 -50897246 + L1Md_F2 LINE L1 5587 6580 -2 5 1114 254 331 126 7 chr13 69387102 69387245 -50897067 + MTE2a LTR MaLR 20 179 -200 5 1114 1051 306 40 33 chr13 69387148 69387604 -50896708 + MT2A LTR ERVL 75 533 0 5 1114 368 310 6 39 chr13 69387758 69387936 -50896376 - MT2A LTR ERVL -44 489 318 5 1114 373 212 211 9 chr13 69387938 69388052 -50896260 + B3 SINE B2 1 137 -79 5 1114 526 270 43 43 chr13 69388208 69388394 -50895918 - MTEa LTR MaLR -186 193 8 5 1114 679 233 0 0 chr13 69388402 69388535 -50895777 + B1_Mur4 SINE Alu 5 137 -13 5 1114 2514 107 23 65 chr13 69389174 69389605 -50894707 + Lx3B LINE L1 6561 6973 0 5 1114 414 310 62 21 chr13 69390582 69390727 -50893585 + RSINE1 SINE B4 15 165 0 5 1114 2452 89 95 0 chr13 69391596 69391932 -50892380 + RLTR9A LTR ERVK 1 368 0 5 1114 203 324 29 29 chr13 69392457 69392562 -50891750 - MER5A DNA MER1_type -46 143 39 5 1114 28 95 0 0 chr13 69393824 69393908 -50890404 + AT_rich Low_complexity Low_complexity 1 84 0 5 1114 358 179 30 0 chr13 69393912 69393979 -50890333 - B3A SINE B2 -128 70 2 5 1114 22 35 0 0 chr13 69394225 69394254 -50890058 + AT_rich Low_complexity Low_complexity 1 29 0 5 1114 1721 183 77 19 chr13 69394459 69394822 -50889490 + ORR1C2 LTR MaLR 1 384 0 5 1114 4426 105 24 72 chr13 69395776 69396565 -50887747 - RMER17A LTR ERVK 0 751 1 5 1114 2116 188 39 12 chr13 69396647 69397057 -50887255 + MTC LTR MaLR 1 421 0 5 1114 652 236 7 26 chr13 69397871 69398023 -50886289 + B1_Mur1 SINE Alu 1 149 0 5 1114 806 166 17 6 chr13 69398029 69398205 -50886107 + GA-rich Low_complexity Low_complexity 1 178 0 5 1114 1897 162 36 39 chr13 69398224 69398610 -50885702 - ORR1B1 LTR MaLR -8 386 2 5 1114 1114 88 0 0 chr13 69399133 69399280 -50885032 - B1_Mus2 SINE Alu 0 147 1 5 1114 326 267 65 10 chr13 69401510 69401629 -50882683 - B1F SINE Alu -20 129 5 5 1114 324 250 40 105 chr13 69403413 69403565 -50880747 + B4 SINE B4 2 143 -149 5 1114 4722 157 9 49 chr13 69403625 69404516 -50879796 - L1_Mm LINE L1 -717 5166 4312 5 1114 1143 124 9 43 chr13 69404516 69404726 -50879586 + Lx LINE L1 6447 6649 -5 5 1114 2264 132 42 18 chr13 69404955 69405601 -50878711 - L1_Mus3 LINE L1 -1059 6401 5726 5 1114 4656 82 27 0 chr13 69405601 69406222 -50878090 + L1_Mus3 LINE L1 5999 6636 -2 5 1114 9064 217 68 41 chr13 69406240 69408716 -50875596 - Lx5 LINE L1 -1688 6008 3472 5 1114 267 188 37 65 chr13 69408746 69408854 -50875458 - Lx6 LINE L1 -20 7440 7336 5 1114 746 195 0 0 chr13 69408897 69409025 -50875287 - B1_Mus1 SINE Alu -18 130 3 5 1114 662 223 54 10 chr13 69409029 69409233 -50875079 - Lx5 LINE L1 -2405 3475 3263 5 1114 434 18 18 0 chr13 69409237 69409292 -50875020 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1114 609 160 21 0 chr13 69409294 69409438 -50874874 + (TG)n Simple_repeat Simple_repeat 2 148 0 5 1114 531 207 0 0 chr13 69409475 69409620 -50874692 + (TG)n Simple_repeat Simple_repeat 2 146 0 5 1114 792 173 0 0 chr13 69409676 69409855 -50874457 + (TG)n Simple_repeat Simple_repeat 1 179 0 5 1114 540 228 81 46 chr13 69409855 69410096 -50874216 - Lx5 LINE L1 -671 3243 2995 5 1114 198 103 0 0 chr13 69410107 69410136 -50874176 + (TTG)n Simple_repeat Simple_repeat 1 29 0 5 1114 184 318 125 0 chr13 69412444 69412532 -50871780 - L2a LINE L2 -13 3413 3315 5 1114 3419 97 37 14 chr13 69413003 69413869 -50870443 + RLTR13C1 LTR ERVK 1 983 0 5 1114 251 357 142 22 chr13 69414376 69414651 -50869661 + MLT1D LTR MaLR 70 377 -128 5 1114 1104 262 25 76 chr13 69415506 69415873 -50868439 - ORR1E LTR MaLR -10 349 2 5 1114 620 277 0 0 chr13 69415909 69416057 -50868255 - B1F SINE Alu -1 148 1 5 1114 2698 58 105 3 chr13 69416107 69416469 -50867843 + MTB LTR MaLR 2 400 0 5 1114 261 139 0 0 chr13 69416665 69416708 -50867604 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1114 1460 224 54 35 chr13 69417511 69417700 -50866612 + MTD LTR MaLR 2 210 -211 5 1114 1336 93 22 0 chr13 69417700 69417883 -50866429 + B2_Mm2 SINE B2 1 187 -8 5 1114 1460 224 40 34 chr13 69417883 69418088 -50866224 + MTD LTR MaLR 211 419 0 5 1114 254 275 40 23 chr13 69418242 69418417 -50865895 + (CATG)n Simple_repeat Simple_repeat 3 180 0 5 1114 251 291 26 43 chr13 69419356 69419471 -50864841 + L2c LINE L2 3050 3162 -225 5 1114 189 0 0 0 chr13 69419772 69419793 -50864519 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1114 294 73 0 0 chr13 69419873 69419914 -50864398 + (TTTG)n Simple_repeat Simple_repeat 3 43 0 5 1114 1162 87 189 0 chr13 69420005 69420201 -50864111 - L1_Mus3 LINE L1 0 6638 6406 5 1114 388 310 130 7 chr13 69420422 69420568 -50863744 - MLT2B2 LTR ERVL -224 291 128 5 1114 275 340 54 42 chr13 69421119 69421285 -50863027 - MTE-int LTR MaLR -870 710 543 5 1114 1191 187 111 59 chr13 69421306 69421455 -50862857 - Lx7 LINE L1 0 7696 7550 5 1114 450 53 0 0 chr13 69421455 69421512 -50862800 + (TAAAA)n Simple_repeat Simple_repeat 5 61 0 5 1114 1191 187 111 59 chr13 69421512 69421686 -50862626 - Lx7 LINE L1 -147 7549 7356 5 1114 809 186 60 23 chr13 69421774 69421989 -50862323 - L1_Mur3 LINE L1 -7200 512 290 5 1114 231 194 14 95 chr13 69422001 69422075 -50862237 - L1_Mur3 LINE L1 -7128 584 517 5 1114 412 322 52 33 chr13 69422085 69422297 -50862015 - MTE-int LTR MaLR -1068 512 297 5 1114 35703 65 6 1 chr13 69422303 69427632 -50856680 + L1Md_F3 LINE L1 275 5586 -297 5 1114 8311 37 2 1 chr13 69427632 69428614 -50855698 + L1Md_F3 LINE L1 5587 6569 -15 5 1114 264 30 0 0 chr13 69428618 69428651 -50855661 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 5 1114 955 300 6 29 chr13 69428672 69428984 -50855328 - MTE-int LTR MaLR -1275 305 1 5 1114 691 319 77 40 chr13 69429439 69429766 -50854546 + MTE2b LTR MaLR 4 342 -37 5 1114 1268 242 125 3 chr13 69429773 69430133 -50854179 + MTD LTR MaLR 1 404 -15 5 1114 2102 23 109 51 chr13 69430822 69431098 -50853214 + RLTR10B LTR ERVK 1 292 0 5 1114 434 299 73 68 chr13 69431506 69431543 -50852769 + MLT1D LTR MaLR 109 141 -364 5 1114 2577 65 6 0 chr13 69431543 69431864 -50852448 - ORR1A2 LTR MaLR 0 327 5 5 1114 434 299 73 68 chr13 69431864 69432196 -50852116 + MLT1D LTR MaLR 142 480 -25 5 1114 207 0 0 0 chr13 69432209 69432232 -50852080 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 1114 235 134 29 15 chr13 69433669 69433737 -50850575 + (TCTCTG)n Simple_repeat Simple_repeat 5 73 0 5 1114 226 263 70 0 chr13 69433787 69433844 -50850468 - ID4 SINE ID -19 64 4 5 1114 245 343 88 0 chr13 69433859 69433996 -50850316 - B1F1 SINE Alu 0 149 1 5 1114 2759 248 77 39 chr13 69434021 69435115 -50849197 - Lx8 LINE L1 -496 5351 4217 5 1114 2847 305 48 39 chr13 69435112 69436955 -50847357 + Lx8 LINE L1 5334 7231 -242 5 1114 2639 90 48 8 chr13 69437895 69438288 -50846024 + Lx2 LINE L1 6589 6997 0 5 1114 788 86 17 0 chr13 69438305 69438422 -50845890 + (GGGA)n Simple_repeat Simple_repeat 4 122 0 5 1114 600 281 24 63 chr13 69438487 69438692 -50845620 + ID_B1 SINE B4 28 224 0 5 1114 1234 30 0 52 chr13 69440567 69440732 -50843580 + B2_Mm2 SINE B2 5 161 -34 5 1114 486 0 0 0 chr13 69440732 69440786 -50843526 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 5 1114 225 314 58 11 chr13 69441135 69441222 -50843090 - MLT1A1 LTR MaLR -313 95 5 5 1114 395 215 47 18 chr13 69442173 69442308 -50842004 - L1M4 LINE L1 -780 5394 5256 5 1114 710 324 56 44 chr13 69442328 69442809 -50841503 - L1M4 LINE L1 -1094 5052 4566 5 1114 688 290 6 0 chr13 69443909 69444085 -50840227 + B3A SINE B2 3 179 -19 6 1114 482 219 7 0 chr13 69444087 69444233 -50840079 + (CA)n Simple_repeat Simple_repeat 2 148 0 6 1114 547 178 15 0 chr13 69444246 69444381 -50839931 + (CA)n Simple_repeat Simple_repeat 2 138 0 6 1114 396 103 0 0 chr13 69446933 69446991 -50837321 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 6 1114 379 206 14 41 chr13 69447001 69447148 -50837164 + (TTATA)n Simple_repeat Simple_repeat 1 143 0 6 1114 207 69 0 0 chr13 69447226 69447255 -50837057 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 6 1114 4519 203 50 42 chr13 69447270 69448334 -50835978 - Lx7 LINE L1 -6 7690 6619 6 1114 5208 164 53 19 chr13 69448330 69449885 -50834427 - L1_Mur3 LINE L1 -4009 1871 262 6 1114 1099 246 107 14 chr13 69450243 69450672 -50833640 + L1MB1 LINE L1 4776 5244 -896 6 1114 620 254 42 13 chr13 69450687 69450881 -50833431 + Lx4B LINE L1 6843 7029 -21 6 1114 441 0 0 0 chr13 69450882 69450931 -50833381 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 6 1114 257 136 32 54 chr13 69450931 69451024 -50833288 + (TA)n Simple_repeat Simple_repeat 2 92 0 6 1114 1230 288 39 7 chr13 69451159 69451593 -50832719 + L1MB1 LINE L1 5603 6050 -139 6 1114 1514 209 96 26 chr13 69454084 69454282 -50830030 + MTD LTR MaLR 1 208 -211 6 1114 1196 72 0 0 chr13 69454282 69454434 -50829878 + L1_Mus1 LINE L1 6415 6566 -1 6 1114 1152 106 0 0 chr13 69454444 69454614 -50829698 + (GGAA)n Simple_repeat Simple_repeat 4 173 0 6 1114 1514 209 96 26 chr13 69454614 69454788 -50829524 + MTD LTR MaLR 216 410 -9 6 1114 275 269 62 31 chr13 69455021 69455117 -50829195 + RMER15 LTR ERVL 32 130 -445 6 1114 749 268 41 12 chr13 69455182 69455428 -50828884 + RMER15 LTR ERVL 305 557 -18 6 1114 333 0 0 0 chr13 69456052 69456089 -50828223 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1114 287 211 176 11 chr13 69459218 69459309 -50825003 + MTD LTR MaLR 1 106 -315 6 1114 221 83 0 27 chr13 69459311 69459348 -50824964 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 6 1114 409 236 0 16 chr13 69459400 69459529 -50824783 + (TA)n Simple_repeat Simple_repeat 2 128 0 6 1114 718 204 51 0 chr13 69459531 69459688 -50824624 + MTD LTR MaLR 255 419 0 6 1114 288 307 26 0 chr13 69460357 69460471 -50823841 + MER5A1 DNA MER1_type 40 156 -10 6 1114 262 320 10 20 chr13 69460746 69460848 -50823464 + (TATATG)n Simple_repeat Simple_repeat 2 102 0 6 1114 225 227 51 51 chr13 69460949 69461028 -50823284 - RSINE1 SINE B4 -85 80 2 6 1114 1228 138 16 5 chr13 69462041 69462231 -50822081 + B2_Mm2 SINE B2 1 192 -3 6 1114 468 0 0 0 chr13 69462435 69462487 -50821825 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 6 1114 216 279 0 29 chr13 69462487 69462557 -50821755 - ID4_ SINE ID -7 76 9 6 1114 432 160 0 0 chr13 69463155 69463255 -50821057 + GA-rich Low_complexity Low_complexity 1 100 0 6 1114 616 280 19 39 chr13 69463844 69463989 -50820323 + RSINE1 SINE B4 12 155 -10 6 1114 522 0 0 0 chr13 69463989 69464047 -50820265 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1114 234 0 0 0 chr13 69464047 69464072 -50820240 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 1114 2109 288 43 34 chr13 69464649 69465353 -50818959 + Lx9 LINE L1 6451 7160 -484 6 1114 831 39 0 0 chr13 69465379 69465482 -50818830 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 6 1114 251 244 13 6 chr13 69465503 69465580 -50818732 + RMER1B Other Other 988 1048 -18 6 1114 461 250 39 72 chr13 69465637 69465716 -50818596 + B4A SINE B4 1 73 -219 6 1114 248 286 8 139 chr13 69465716 69465838 -50818474 + B1_Mur2 SINE Alu 1 106 -43 6 1114 668 243 168 0 chr13 69466260 69466433 -50817879 + B3 SINE B2 2 203 -13 6 1114 266 295 0 82 chr13 69466463 69466489 -50817823 + ID4 SINE ID 1 26 -57 6 1114 3044 71 26 26 chr13 69466489 69466910 -50817402 + BGLII LTR ERVK 1 421 0 6 1114 266 295 0 82 chr13 69466910 69466968 -50817344 + ID4 SINE ID 27 78 -5 6 1114 367 319 0 11 chr13 69467356 69467448 -50816864 + B4 SINE B4 11 101 -191 6 1114 395 241 35 44 chr13 69467466 69467579 -50816733 + B4 SINE B4 163 274 -18 6 1114 208 244 22 0 chr13 69467613 69467658 -50816654 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1115 618 291 64 46 chr13 69468382 69468566 -50815746 + MLT1B LTR MaLR 52 242 -148 6 1115 4455 109 105 1 chr13 69468566 69469234 -50815078 - RMER19A LTR ERVK 0 737 1 6 1115 618 291 64 46 chr13 69469234 69469377 -50814935 + MLT1B LTR MaLR 243 385 -5 6 1115 763 237 111 52 chr13 69469601 69469908 -50814404 - ORR1E LTR MaLR -31 328 4 6 1115 259 241 122 70 chr13 69471348 69471504 -50812808 + L1MA5 LINE L1 6047 6210 -90 6 1115 303 49 0 0 chr13 69472665 69472706 -50811606 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 6 1115 497 315 73 35 chr13 69473503 69473845 -50810467 + Lx9 LINE L1 7256 7610 -34 6 1115 260 190 35 71 chr13 69474751 69474836 -50809476 + L1MEg LINE L1 1271 1352 -4732 6 1115 567 0 0 0 chr13 69474905 69474968 -50809344 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1115 604 276 31 31 chr13 69474971 69475195 -50809117 - B4 SINE B4 -20 272 49 6 1115 291 284 113 20 chr13 69475326 69475477 -50808835 - MER58A DNA MER1_type 0 224 60 6 1115 395 251 18 13 chr13 69476429 69476891 -50807421 + (CA)n Simple_repeat Simple_repeat 1 464 0 6 1115 234 0 0 0 chr13 69479319 69479345 -50804967 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1115 857 316 47 0 chr13 69479464 69479784 -50804528 - MLT2C1 LTR ERVL -62 335 1 6 1115 1307 218 36 100 chr13 69479903 69480351 -50803961 - MTD LTR MaLR 0 419 1 6 1115 418 304 13 7 chr13 69481850 69481999 -50802313 - L2a LINE L2 -6 3420 3271 6 1115 1719 187 71 18 chr13 69482244 69482626 -50801686 - MTD LTR MaLR -17 402 1 6 1115 451 328 110 28 chr13 69482628 69483136 -50801176 - L2a LINE L2 -1323 2096 1547 6 1115 555 107 0 0 chr13 69483606 69483690 -50800622 + (TTTA)n Simple_repeat Simple_repeat 1 84 0 6 1115 1157 68 0 0 chr13 69483690 69483836 -50800476 - B1_Mm SINE Alu -1 146 1 6 1115 396 0 0 0 chr13 69483985 69484029 -50800283 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1115 233 177 191 16 chr13 69484030 69484093 -50800219 - Lx7 LINE L1 -1424 6272 6199 6 1115 623 217 14 14 chr13 69484168 69484308 -50800004 - RLTR25A LTR ERVK 0 1103 964 6 1115 706 169 46 20 chr13 69484291 69484442 -50799870 - RLTR25A LTR ERVK -254 774 620 6 1115 268 43 43 0 chr13 69485731 69485777 -50798535 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 6 1115 2463 205 28 11 chr13 69485780 69486326 -50797986 - RLTR25A LTR ERVK -420 608 1 6 1115 2574 208 46 21 chr13 69486664 69487292 -50797020 - Lx7 LINE L1 -724 5156 4513 6 1115 332 272 12 17 chr13 69487661 69487833 -50796479 + G-rich Low_complexity Low_complexity 6 176 0 6 1115 457 200 23 29 chr13 69487800 69487975 -50796337 + GA-rich Low_complexity Low_complexity 5 178 0 6 1115 1004 69 0 58 chr13 69488796 69488950 -50795362 + B1_Mus2 SINE Alu 3 147 0 6 1115 265 302 42 8 chr13 69491753 69491873 -50792439 + MER3 DNA MER1_type 86 209 0 6 1115 25 0 0 0 chr13 69493053 69493078 -50791234 + AT_rich Low_complexity Low_complexity 1 25 0 6 1115 3120 63 10 2 chr13 69493203 69493598 -50790714 + MTB LTR MaLR 1 398 -2 6 1115 1244 164 13 22 chr13 69494346 69494570 -50789742 - URR1B DNA MER1_type -3 222 1 6 1115 1979 229 44 10 chr13 69494667 69495149 -50789163 + Lx6 LINE L1 6963 7460 0 6 1115 4520 100 23 8 chr13 69495315 69495980 -50788332 - Lx2A LINE L1 0 7008 6334 6 1115 410 305 93 126 chr13 69495986 69496320 -50787992 - MER65D LTR ERV1 -141 332 10 6 1115 1263 251 39 31 chr13 69496853 69497211 -50787101 + MTEa LTR MaLR 18 378 -1 6 1115 444 307 8 22 chr13 69498265 69498399 -50785913 + B1F1 SINE Alu 6 140 -9 6 1115 22 0 0 0 chr13 69500146 69500168 -50784144 + AT_rich Low_complexity Low_complexity 1 22 0 1 1115 757 268 106 13 chr13 69500965 69501192 -50783120 + B4A SINE B4 1 248 -44 2 1115 196 28 26 53 chr13 69501203 69501241 -50783071 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 3 1115 676 188 208 38 chr13 69501851 69502034 -50782278 + B3 SINE B2 1 214 -2 4 1115 1211 42 0 0 chr13 69502039 69502181 -50782131 + B1_Mus1 SINE Alu 1 142 -6 5 1115 542 15 15 0 chr13 69502182 69502249 -50782063 + (TAAA)n Simple_repeat Simple_repeat 4 71 0 6 1115 27 0 0 0 chr13 69502265 69502292 -50782020 + AT_rich Low_complexity Low_complexity 1 27 0 7 1115 1891 318 27 9 chr13 69503182 69503817 -50780495 + Lx8 LINE L1 6452 7097 -376 8 1115 335 236 77 21 chr13 69503821 69503964 -50780348 - L1MA4 LINE L1 -370 5930 5780 9 1115 180 77 0 0 chr13 69505487 69505513 -50778799 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1115 1534 150 0 4 chr13 69506121 69506375 -50777937 + ORR1A1 LTR MaLR 1 253 -93 1 1115 273 208 96 14 chr13 69506369 69506442 -50777870 + B3 SINE B2 130 208 -8 1 1115 990 316 17 8 chr13 69506506 69506857 -50777455 + Lx9 LINE L1 6581 6934 -710 1 1115 567 268 204 56 chr13 69506857 69507231 -50777081 + Lx9 LINE L1 6847 7418 -226 1 1115 2480 285 72 99 chr13 69507868 69508910 -50775402 + Lx9 LINE L1 6418 7431 -213 1 1115 608 209 61 23 chr13 69509044 69509176 -50775136 + B1_Mur3 SINE Alu 1 137 -12 1 1115 1620 4 0 0 chr13 69509176 69509431 -50774881 + (GGAAA)n Simple_repeat Simple_repeat 1 255 0 1 1115 451 112 12 12 chr13 69509431 69509512 -50774800 + (GGAGA)n Simple_repeat Simple_repeat 1 81 0 1 1115 686 128 0 8 chr13 69509494 69509612 -50774700 + (GGAA)n Simple_repeat Simple_repeat 3 119 0 1 1115 246 336 26 34 chr13 69510424 69510541 -50773771 - MLT1G1 LTR MaLR -233 346 231 2 1115 2091 120 0 3 chr13 69510940 69511242 -50773070 - L1_Mm LINE L1 -188 5695 5395 2 1115 876 169 42 0 chr13 69511242 69511408 -50772904 + Lx2 LINE L1 6823 6995 -2 2 1115 27 0 0 0 chr13 69511408 69511435 -50772877 + AT_rich Low_complexity Low_complexity 1 27 0 2 1115 919 242 32 0 chr13 69512434 69512653 -50771659 - MTE2b LTR MaLR -151 228 3 2 1115 327 318 12 16 chr13 69513774 69514023 -50770289 + GA-rich Low_complexity Low_complexity 1 247 0 2 1115 606 170 0 17 chr13 69514885 69515059 -50769253 + (TG)n Simple_repeat Simple_repeat 2 172 0 2 1115 352 209 54 11 chr13 69515104 69515196 -50769116 - B4A SINE B4 -20 272 177 2 1115 508 301 29 0 chr13 69515271 69515407 -50768905 - B4A SINE B4 -120 172 33 2 1115 2857 70 0 12 chr13 69515447 69515851 -50768461 + MTB_Mm LTR MaLR 1 399 -8 2 1115 295 308 77 0 chr13 69515922 69516052 -50768260 + L1M2 LINE L1 4045 4184 -1959 2 1115 236 298 64 0 chr13 69517944 69518038 -50766274 + L1MD LINE L1 2469 2568 -3578 3 1115 2264 82 6 0 chr13 69518121 69518438 -50765874 + ORR1A2 LTR MaLR 1 319 -8 3 1115 799 284 77 34 chr13 69518757 69519110 -50765202 - L1MA4A LINE L1 -414 5889 5522 3 1115 386 246 70 56 chr13 69519186 69519199 -50765113 + ID_B1 SINE B4 79 133 -91 3 1115 491 200 36 9 chr13 69519199 69519310 -50765002 + B1F1 SINE Alu 6 119 -30 3 1115 386 246 70 56 chr13 69519310 69519328 -50764984 + ID_B1 SINE B4 134 222 -2 3 1115 893 266 143 16 chr13 69519613 69519934 -50764378 + MTEa LTR MaLR 17 378 -1 3 1115 918 291 97 32 chr13 69519949 69520329 -50763983 + MTE-int LTR MaLR 59 463 -1117 3 1115 689 298 290 28 chr13 69520334 69520734 -50763578 + MTE-int LTR MaLR 648 1152 -428 3 1115 663 196 83 0 chr13 69520839 69520972 -50763340 + B1_Mur2 SINE Alu 6 149 0 3 1115 447 248 55 62 chr13 69521308 69521454 -50762858 + B1F SINE Alu 3 147 -2 3 1115 217 238 24 12 chr13 69522097 69522182 -50762130 + GA-rich Low_complexity Low_complexity 4 89 0 3 1115 296 295 64 102 chr13 69522922 69523182 -50761130 - B4A SINE B4 -19 273 7 4 1115 918 270 87 13 chr13 69523264 69523575 -50760737 - Lx9 LINE L1 -26 7618 7285 4 1115 206 167 0 20 chr13 69523702 69523751 -50760561 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1115 924 167 17 28 chr13 69523770 69523949 -50760363 - B2_Mm2 SINE B2 -18 177 1 4 1115 21 0 0 0 chr13 69524493 69524514 -50759798 + AT_rich Low_complexity Low_complexity 1 21 0 4 1115 270 0 0 0 chr13 69525834 69525864 -50758448 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1115 748 252 26 35 chr13 69526376 69526602 -50757710 + Lx9 LINE L1 7106 7329 -315 4 1115 296 231 0 49 chr13 69526611 69526693 -50757619 + PB1D9 SINE Alu 41 118 -2 4 1115 236 282 59 21 chr13 69527429 69527563 -50756749 + MIRb SINE MIR 30 166 -102 4 1115 186 71 0 0 chr13 69528061 69528089 -50756223 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 4 1115 229 26 26 26 chr13 69528092 69528131 -50756181 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1115 4942 70 39 0 chr13 69528133 69528772 -50755540 - L1_Mus3 LINE L1 -12 6626 5963 5 1115 628 308 14 24 chr13 69529061 69529274 -50755038 - ID_B1 SINE B4 -7 217 7 5 1115 192 327 0 0 chr13 69529315 69529367 -50754945 + MIRm SINE MIR 212 263 -13 5 1115 2110 188 52 43 chr13 69529507 69529797 -50754515 + Lx9 LINE L1 7150 7448 -196 5 1115 3120 86 0 14 chr13 69529797 69530210 -50754102 + MTB_Mm LTR MaLR 1 407 0 5 1115 2110 188 52 43 chr13 69530210 69530404 -50753908 + Lx9 LINE L1 7449 7638 -6 5 1115 624 83 0 0 chr13 69531392 69531488 -50752824 + (TC)n Simple_repeat Simple_repeat 1 96 0 5 1115 281 26 26 0 chr13 69532654 69532692 -50751620 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 5 1115 26 30 0 0 chr13 69532860 69532893 -50751419 + AT_rich Low_complexity Low_complexity 1 33 0 5 1115 2104 127 41 134 chr13 69534016 69534479 -50749833 - RLTR9B2 LTR ERVK 0 420 1 5 1115 4301 87 27 2 chr13 69535371 69535958 -50748354 + Lx3_Mus LINE L1 6408 7009 0 6 1115 790 197 71 5 chr13 69536179 69536363 -50747949 + Lx8 LINE L1 6311 6506 -967 6 1115 279 335 79 0 chr13 69536357 69536521 -50747791 + Lx8 LINE L1 6768 6944 -529 6 1115 1194 282 18 9 chr13 69536524 69536867 -50747445 + Lx8 LINE L1 6516 6861 -612 6 1115 924 267 72 88 chr13 69537023 69537454 -50746858 + Lx8 LINE L1 6913 7336 -137 6 1115 299 276 0 0 chr13 69537988 69538045 -50746267 + B1_Mus1 SINE Alu 6 62 -86 6 1115 1227 137 145 17 chr13 69538045 69538082 -50746230 + RMER4B LTR ERVK 1 51 -415 6 1115 1116 23 0 0 chr13 69538082 69538213 -50746099 + (GA)n Simple_repeat Simple_repeat 2 132 0 6 1115 2522 120 76 65 chr13 69538213 69538564 -50745748 + RMER4B LTR ERVK 54 434 -151 6 1115 4731 70 19 8 chr13 69538564 69539188 -50745124 + L1_Mus4 LINE L1 6006 6636 0 6 1115 2522 120 76 65 chr13 69539188 69539283 -50745029 + RMER4B LTR ERVK 435 510 -75 6 1115 3343 41 5 2 chr13 69539283 69539678 -50744634 - MTA_Mm LTR MaLR 0 396 1 6 1115 2522 120 76 65 chr13 69539678 69539756 -50744556 + RMER4B LTR ERVK 511 585 0 6 1115 343 107 0 51 chr13 69539756 69539810 -50744502 + B1_Mus2 SINE Alu 90 140 -7 6 1115 456 67 0 0 chr13 69540068 69540128 -50744184 + (TCC)n Simple_repeat Simple_repeat 2 61 0 6 1115 702 0 0 0 chr13 69540128 69540206 -50744106 + (CTG)n Simple_repeat Simple_repeat 1 78 0 7 1115 279 243 13 26 chr13 69540729 69540805 -50743507 - MTEb LTR MaLR 0 379 305 7 1115 278 277 32 0 chr13 69540819 69540913 -50743399 - Tigger7 DNA MER2_type -53 2438 2342 7 1115 350 274 0 0 chr13 69542255 69542357 -50741955 + L1MB4 LINE L1 6044 6145 -35 7 1115 507 134 0 0 chr13 69542366 69542448 -50741864 + (TA)n Simple_repeat Simple_repeat 2 83 0 7 1115 671 116 0 9 chr13 69542458 69542571 -50741741 + (GGAA)n Simple_repeat Simple_repeat 3 114 0 7 1115 512 279 109 0 chr13 69542584 69542731 -50741581 + RSINE1 SINE B4 3 165 0 7 1115 450 299 31 25 chr13 69544242 69544403 -50739909 + RSINE1 SINE B4 4 165 0 7 1115 1684 89 95 11 chr13 69546198 69546472 -50737840 - ORR1A2 LTR MaLR -4 323 27 7 1115 8214 71 8 5 chr13 69546472 69547692 -50736620 - L1_Mus3 LINE L1 0 6638 5415 7 1115 372 123 0 0 chr13 69547692 69547749 -50736563 - ORR1A2 LTR MaLR -270 57 1 7 1115 263 238 22 56 chr13 69548298 69548387 -50735925 + MTE2a LTR MaLR 90 175 -204 8 1115 544 268 72 88 chr13 69550320 69550755 -50733557 + MTE2a LTR MaLR 2 379 0 8 1115 1541 201 114 3 chr13 69550815 69551174 -50733138 - MTD LTR MaLR 0 419 21 8 1115 387 0 0 0 chr13 69551174 69551217 -50733095 + (TAA)n Simple_repeat Simple_repeat 2 44 0 8 1115 233 160 0 39 chr13 69551270 69551322 -50732990 + GA-rich Low_complexity Low_complexity 4 53 0 8 1115 2282 71 15 21 chr13 69551842 69551893 -50732419 - ORR1A2 LTR MaLR 0 327 283 8 1115 611 117 0 66 chr13 69551893 69552030 -50732282 - Lx LINE L1 0 6654 6527 8 1115 2282 71 15 21 chr13 69552030 69552307 -50732005 - ORR1A2 LTR MaLR -45 282 1 8 1115 572 303 154 11 chr13 69552476 69552853 -50731459 + MER74A LTR ERVL 23 453 -105 8 1115 1448 134 110 4 chr13 69552912 69552980 -50731332 + ORR1B2 LTR MaLR 75 168 -199 8 1115 717 12 0 0 chr13 69552980 69553062 -50731250 + (TC)n Simple_repeat Simple_repeat 2 83 0 8 1115 1448 134 110 4 chr13 69553062 69553256 -50731056 + ORR1B2 LTR MaLR 169 364 -3 8 1115 352 320 6 74 chr13 69554123 69554285 -50730027 + B4A SINE B4 142 292 0 9 1115 395 300 6 0 chr13 69554326 69554496 -50729816 + (CA)n Simple_repeat Simple_repeat 2 172 0 9 1115 294 185 0 61 chr13 69554505 69554603 -50729709 + (CATA)n Simple_repeat Simple_repeat 1 92 0 9 1115 508 332 56 52 chr13 69554767 69555018 -50729294 + B4A SINE B4 41 292 0 9 1115 233 29 29 0 chr13 69555067 69555101 -50729211 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 9 1115 235 0 0 0 chr13 69557224 69557252 -50727060 + ORR1A2 LTR MaLR 1 28 -299 9 1115 254 128 21 21 chr13 69557852 69557900 -50726412 - MTD LTR MaLR -20 401 354 9 1115 745 261 45 11 chr13 69558077 69558255 -50726057 - MTD LTR MaLR -42 377 194 9 1115 242 190 158 33 chr13 69558266 69558386 -50725926 - Lx9 LINE L1 -20 7624 7490 9 1115 388 241 181 0 chr13 69558385 69558518 -50725794 + Lx9 LINE L1 7316 7472 -172 9 1115 570 146 32 8 chr13 69558575 69558699 -50725613 - Lx9 LINE L1 -1 7643 7517 9 1115 594 233 46 7 chr13 69558707 69558858 -50725454 - MTD LTR MaLR -217 202 46 9 1115 419 225 7 130 chr13 69558933 69559071 -50725241 - MLT2B3 LTR ERVL -427 127 7 9 1115 295 309 116 75 chr13 69559214 69559455 -50724857 - MLT1C LTR MaLR -208 259 9 1 1115 815 269 155 106 chr13 69559558 69559907 -50724405 - MTE2a LTR MaLR -11 368 3 1 1115 500 295 6 154 chr13 69559939 69560095 -50724217 - ID_B1 SINE B4 -8 216 84 1 1115 433 250 99 64 chr13 69560661 69560802 -50723510 - RMER30 DNA MER1_type -50 152 7 1 1115 326 260 62 0 chr13 69561173 69561269 -50723043 - MLT2D LTR ERVL -136 278 177 1 1115 1172 151 5 25 chr13 69561269 69561466 -50722846 - MTB_Mm LTR MaLR -214 193 1 1 1115 378 42 0 0 chr13 69561491 69561539 -50722773 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1115 339 280 129 40 chr13 69561550 69561751 -50722561 - L1ME4a LINE L1 -123 6001 5783 1 1115 216 0 0 0 chr13 69561753 69561777 -50722535 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 1 1115 478 110 0 14 chr13 69561902 69561976 -50722336 + Lx7 LINE L1 6202 6274 -1422 1 1115 803 354 108 30 chr13 69561975 69562743 -50721569 + Lx8 LINE L1 6596 7423 -50 1 1115 209 314 8 53 chr13 69562816 69562947 -50721365 + GA-rich Low_complexity Low_complexity 6 130 0 1 1115 21 0 0 0 chr13 69563047 69563068 -50721244 + AT_rich Low_complexity Low_complexity 1 21 0 1 1115 306 241 28 20 chr13 69563091 69563234 -50721078 + L1M2 LINE L1 1681 1835 -4012 1 1115 508 310 101 32 chr13 69563308 69563739 -50720573 + L1M2 LINE L1 2709 3201 -2942 1 1115 1101 62 22 11 chr13 69563813 69563991 -50720321 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 1115 1363 73 28 0 chr13 69564126 69564304 -50720008 + B2_Mm2 SINE B2 2 184 -11 1 1115 495 0 0 0 chr13 69564304 69564359 -50719953 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1115 189 0 0 0 chr13 69565473 69565494 -50718818 + (CTTG)n Simple_repeat Simple_repeat 3 23 0 1 1115 312 308 18 12 chr13 69565612 69565783 -50718529 + GA-rich Low_complexity Low_complexity 5 176 0 1 1115 372 256 0 74 chr13 69565725 69565915 -50718397 + G-rich Low_complexity Low_complexity 3 178 0 1 1115 458 265 5 43 chr13 69565836 69566216 -50718096 + GA-rich Low_complexity Low_complexity 1 365 0 1 1115 493 226 0 63 chr13 69565960 69566149 -50718163 + G-rich Low_complexity Low_complexity 3 179 0 1 1115 829 227 279 10 chr13 69566419 69566717 -50717595 + MTEb LTR MaLR 1 378 -1 1 1115 21 0 0 0 chr13 69566890 69566911 -50717401 + AT_rich Low_complexity Low_complexity 1 21 0 1 1115 367 127 0 18 chr13 69566932 69566988 -50717324 - ORR1A2 LTR MaLR -223 104 50 1 1115 2254 81 7 0 chr13 69566988 69567284 -50717028 + ORR1A2 LTR MaLR 1 298 -29 1 1115 1785 87 142 12 chr13 69567508 69567964 -50716348 - RLTR1B LTR ERV1 0 507 1 1 1115 229 269 60 0 chr13 69569727 69569794 -50714518 + MLT1I LTR MaLR 318 388 -23 1 1115 233 263 18 0 chr13 69570103 69570160 -50714152 - MER45A DNA Tip100 -32 146 89 1 1115 1123 43 20 19 chr13 69570369 69570680 -50713632 + (TG)n Simple_repeat Simple_repeat 1 311 0 1 1115 1139 50 0 37 chr13 69570702 69570889 -50713423 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1115 225 270 16 0 chr13 69570895 69570958 -50713354 - ID4 SINE ID -18 65 2 1 1115 779 260 208 44 chr13 69571026 69571477 -50712835 + MT2A LTR ERVL 9 533 0 1 1115 5253 131 83 7 chr13 69571477 69572363 -50711949 - RMER17B LTR ERVK -4 954 1 1 1115 27 49 0 0 chr13 69573286 69573327 -50710985 + AT_rich Low_complexity Low_complexity 1 41 0 1 1115 2350 147 72 0 chr13 69574752 69575141 -50709171 - MTC LTR MaLR -2 419 3 1 1115 273 328 57 66 chr13 69575242 69575454 -50708858 + MLT1J LTR MaLR 86 295 -217 1 1115 378 171 0 0 chr13 69575726 69575796 -50708516 + GA-rich Low_complexity Low_complexity 1 70 0 1 1115 1387 68 6 6 chr13 69575796 69576122 -50708190 + (GAAA)n Simple_repeat Simple_repeat 1 326 0 1 1115 333 68 0 0 chr13 69576251 69576295 -50708017 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1115 3270 273 62 22 chr13 69576338 69577298 -50707014 + Lx8 LINE L1 6252 7250 -223 1 1115 746 193 117 35 chr13 69577304 69577499 -50706813 - ORR1D1 LTR MaLR -169 225 5 1 1115 504 0 0 0 chr13 69578002 69578058 -50706254 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 1 1115 360 0 0 0 chr13 69578084 69578124 -50706188 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1115 234 322 132 40 chr13 69578686 69578838 -50705474 + MLT1E LTR MaLR 472 637 -16 1 1115 724 230 67 28 chr13 69580019 69580198 -50704114 + B3A SINE B2 11 196 -2 1 1115 185 244 73 49 chr13 69580405 69580487 -50703825 - L3 LINE CR1 -2244 2245 2162 1 1115 323 250 39 96 chr13 69581065 69581273 -50703039 - Lx9 LINE L1 -4 7640 7445 1 1115 544 275 0 48 chr13 69581327 69581472 -50702840 + B1F SINE Alu 12 149 0 1 1115 197 65 0 31 chr13 69581537 69581569 -50702743 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 1 1115 300 193 70 0 chr13 69582685 69582742 -50701570 + ID_B1 SINE B4 161 221 -3 1 1115 642 106 24 0 chr13 69582790 69582913 -50701399 + (CATA)n Simple_repeat Simple_repeat 2 127 0 1 1115 1179 69 0 0 chr13 69582954 69583129 -50701183 + (TAGA)n Simple_repeat Simple_repeat 3 177 0 1 1115 3268 271 91 28 chr13 69583131 69584203 -50700109 + Lx8 LINE L1 6059 7197 -276 1 1115 2242 113 43 16 chr13 69584238 69584598 -50699714 + ORR1A2 LTR MaLR 1 374 0 1 1115 2715 178 50 20 chr13 69585259 69585797 -50698515 - RMER19B LTR ERVK 0 902 349 1 1115 224 171 49 0 chr13 69586112 69586171 -50698141 + polypyrimidine Low_complexity Low_complexity 1 61 0 1 1115 345 300 135 54 chr13 69586391 69586687 -50697625 - RMER15 LTR ERVL -66 509 190 1 1115 531 0 0 0 chr13 69587224 69587283 -50697029 + (CA)n Simple_repeat Simple_repeat 1 59 0 1 1115 251 322 17 39 chr13 69587640 69587821 -50696491 + (CATA)n Simple_repeat Simple_repeat 4 180 0 1 1115 554 366 56 21 chr13 69588137 69588477 -50695835 + MLT2D LTR ERVL 9 360 -54 1 1115 1309 13 26 9 chr13 69588605 69588833 -50695479 + (TAGA)n Simple_repeat Simple_repeat 1 231 0 1 1115 800 138 51 0 chr13 69588881 69589140 -50695172 + (TAGA)n Simple_repeat Simple_repeat 1 272 0 1 1115 1270 126 192 45 chr13 69589210 69589501 -50694811 + RLTR9E LTR ERVK 76 409 0 1 1115 422 238 108 7 chr13 69590035 69590183 -50694129 - Lx8 LINE L1 -441 7032 6870 1 1115 430 340 48 5 chr13 69590185 69590374 -50693938 + MER58B DNA MER1_type 79 275 -66 1 1115 603 102 0 0 chr13 69590893 69590981 -50693331 + (TG)n Simple_repeat Simple_repeat 1 88 0 1 1115 654 268 129 75 chr13 69591048 69591357 -50692955 - ORR1E LTR MaLR -7 372 38 1 1115 354 218 54 18 chr13 69592262 69592374 -50691938 - L1MC1 LINE L1 -6 6327 6212 1 1115 376 125 31 0 chr13 69592395 69592459 -50691853 - ORR1B2 LTR MaLR 0 394 329 1 1115 689 171 136 4 chr13 69592460 69592631 -50691681 - B3 SINE B2 0 198 2 1 1115 1541 170 72 28 chr13 69592633 69592923 -50691389 - ORR1B2 LTR MaLR -58 309 7 1 1115 445 317 41 33 chr13 69592923 69593194 -50691118 - L1MC1 LINE L1 -162 6171 5899 1 1115 476 205 12 0 chr13 69593239 69593322 -50690990 - ORR1D2 LTR MaLR -1 369 286 1 1115 294 81 0 0 chr13 69593322 69593359 -50690953 - Lx LINE L1 -250 6404 6368 1 1115 810 103 55 61 chr13 69593359 69593524 -50690788 + Lx2 LINE L1 6833 6996 -1 1 1115 749 137 13 19 chr13 69593530 69593686 -50690626 + GA-rich Low_complexity Low_complexity 3 157 0 1 1115 1243 237 78 7 chr13 69593686 69593979 -50690333 - ORR1D2 LTR MaLR -56 314 1 1 1115 1181 222 44 93 chr13 69594761 69595128 -50689184 + ORR1E LTR MaLR 5 353 -6 1 1115 652 115 87 133 chr13 69595234 69595296 -50689016 + URR1B DNA MER1_type 83 144 -81 1 1115 1201 48 0 7 chr13 69595296 69595444 -50688868 + B1_Mm SINE Alu 1 147 0 1 1115 652 115 87 133 chr13 69595444 69595531 -50688781 + URR1B DNA MER1_type 145 225 0 1 1115 434 349 4 6 chr13 69596225 69596407 -50687905 + B4 SINE B4 68 248 -44 1 1115 287 323 30 0 chr13 69596476 69596575 -50687737 - RMER12 LTR ERVK -476 846 745 1 1115 277 288 127 78 chr13 69597828 69598039 -50686273 + RLTR12B LTR ERVK 22 228 -300 1 1115 182 33 67 0 chr13 69598039 69598069 -50686243 + (CAGA)n Simple_repeat Simple_repeat 1 32 0 1 1115 277 288 127 78 chr13 69598069 69598102 -50686210 + RLTR12B LTR ERVK 229 277 -251 1 1115 313 238 46 28 chr13 69598297 69598461 -50685851 + L1MA4 LINE L1 5738 5907 -393 1 1115 207 347 10 10 chr13 69598548 69598644 -50685668 + GA-rich Low_complexity Low_complexity 6 101 0 1 1115 277 222 13 40 chr13 69599092 69599167 -50685145 - MamRep1161 DNA TcMar -121 836 764 1 1116 3952 74 20 61 chr13 69600194 69600784 -50683528 - RMER2 LTR ERV1 0 567 2 1 1116 243 0 0 0 chr13 69600876 69600903 -50683409 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1116 343 231 52 52 chr13 69601218 69601314 -50682998 + MER90 LTR ERV1 3 98 -477 1 1116 189 107 0 0 chr13 69601411 69601439 -50682873 + (CCCCCA)n Simple_repeat Simple_repeat 2 29 0 1 1116 909 56 4 16 chr13 69601641 69601779 -50682533 + B1_Mus1 SINE Alu 10 149 0 1 1116 279 215 12 12 chr13 69601779 69601859 -50682453 + (TAAA)n Simple_repeat Simple_repeat 1 80 0 1 1116 1235 193 226 13 chr13 69602307 69602617 -50681695 + ORR1C2 LTR MaLR 9 384 0 1 1116 255 133 0 0 chr13 69602839 69602884 -50681428 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1116 431 341 67 48 chr13 69602896 69603460 -50680852 + L1M2c LINE L1 1436 2010 -4779 1 1116 1350 41 6 23 chr13 69603657 69603817 -50680495 + B2_Mm1t SINE B2 1 160 -33 1 1116 207 0 0 0 chr13 69603817 69603840 -50680472 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 1116 1350 41 6 23 chr13 69603840 69603855 -50680457 + B2_Mm1t SINE B2 161 173 -20 1 1116 246 132 0 0 chr13 69604024 69604077 -50680235 + (T)n Simple_repeat Simple_repeat 1 53 0 1 1116 1174 48 0 33 chr13 69604080 69604232 -50680080 - B1_Mm SINE Alu 0 147 1 1 1116 920 129 11 17 chr13 69604406 69604587 -50679725 + GA-rich Low_complexity Low_complexity 1 180 0 1 1116 402 261 64 48 chr13 69605331 69605447 -50678865 + ORR1E LTR MaLR 1 118 -252 1 1116 1512 124 92 11 chr13 69605447 69605629 -50678683 + RLTR20D LTR ERVK 1 190 -378 1 1116 432 0 0 0 chr13 69605629 69605677 -50678635 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1116 1512 124 92 11 chr13 69605677 69605754 -50678558 + RLTR20D LTR ERVK 191 280 -288 1 1116 803 162 73 13 chr13 69605743 69605807 -50678505 + RLTR20D LTR ERVK 403 471 -97 1 1116 429 20 0 0 chr13 69605807 69605857 -50678455 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1116 803 162 73 13 chr13 69605857 69605942 -50678370 + RLTR20D LTR ERVK 472 560 -8 1 1116 2443 95 0 9 chr13 69606050 69606381 -50677931 + RLTR13D2 LTR ERVK 1 328 -478 2 1116 2482 155 18 20 chr13 69606374 69606816 -50677496 + RLTR13D2 LTR ERVK 583 1023 0 2 1116 566 237 68 15 chr13 69606816 69606944 -50677368 + ORR1E LTR MaLR 221 355 -4 1 1116 303 281 12 0 chr13 69607106 69607188 -50677124 + L1MA4 LINE L1 5847 5929 -371 2 1116 1502 191 68 41 chr13 69607485 69607824 -50676488 - RMER19B LTR ERVK -96 806 459 2 1116 471 249 106 42 chr13 69608140 69608329 -50675983 - MER3 DNA MER1_type -3 206 6 2 1116 244 250 0 0 chr13 69608606 69608666 -50675646 - MADE2 DNA Mariner -3 77 18 2 1116 324 70 0 0 chr13 69609475 69609518 -50674794 + (A)n Simple_repeat Simple_repeat 1 43 0 2 1116 212 352 31 15 chr13 69609988 69610118 -50674194 - L3 LINE CR1 -303 4186 4055 2 1116 347 250 106 12 chr13 69610194 69610279 -50674033 + ID_B1 SINE B4 79 171 -53 2 1116 383 212 125 0 chr13 69610205 69610285 -50674027 + PB1D10 SINE Alu 8 97 -20 2 1116 1069 283 40 42 chr13 69611237 69611638 -50672674 + MTE2a LTR MaLR 6 406 -13 2 1116 1541 316 57 55 chr13 69612308 69613233 -50671079 + Lx9 LINE L1 6696 7622 -22 2 1116 978 103 0 0 chr13 69613285 69613430 -50670882 + (GAA)n Simple_repeat Simple_repeat 2 146 0 2 1116 254 293 26 8 chr13 69613816 69613933 -50670379 + L1MC5 LINE L1 7315 7433 -528 2 1116 1041 293 47 61 chr13 69613970 69614122 -50670190 - ORR1E LTR MaLR 0 359 213 2 1116 672 93 0 0 chr13 69614122 69614219 -50670093 + (TTTC)n Simple_repeat Simple_repeat 2 98 0 2 1116 5002 97 45 7 chr13 69614219 69614317 -50669995 - Lx LINE L1 -15 6639 6519 2 1116 180 0 0 0 chr13 69614317 69614337 -50669975 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 2 1116 5002 97 45 7 chr13 69614337 69614933 -50669379 - Lx LINE L1 -136 6518 5919 2 1116 1041 293 47 61 chr13 69614933 69615139 -50669173 - ORR1E LTR MaLR -147 212 6 2 1116 1447 104 9 0 chr13 69615356 69615577 -50668735 - Lx2 LINE L1 0 6997 6775 2 1116 4921 111 24 7 chr13 69615575 69616336 -50667976 - Lx2 LINE L1 -352 6645 5872 2 1116 30 0 0 0 chr13 69616376 69616406 -50667906 + AT_rich Low_complexity Low_complexity 1 30 0 2 1116 1168 188 100 15 chr13 69617344 69617604 -50666708 - MTD LTR MaLR 0 419 138 2 1116 2511 101 5 65 chr13 69618118 69618500 -50665812 + RLTR10D LTR ERVK 1 359 0 2 1116 1173 238 54 45 chr13 69618520 69619042 -50665270 + RMER12 LTR ERVK 643 1202 -120 2 1116 250 143 143 0 chr13 69619145 69619194 -50665118 + RMER17C-int LTR ERVK 2971 3026 -3111 2 1116 399 154 11 11 chr13 69619264 69619352 -50664960 + RMER17C-int LTR ERVK 2108 2176 -1062 2 1116 896 252 135 19 chr13 69619799 69620066 -50664246 - MTD LTR MaLR -20 399 102 2 1116 402 262 33 60 chr13 69620684 69620834 -50663478 + MER5B DNA MER1_type 26 171 -7 2 1116 597 64 0 0 chr13 69621400 69621478 -50662834 + (TTTC)n Simple_repeat Simple_repeat 3 80 0 2 1116 385 363 32 6 chr13 69621700 69621858 -50662454 - RSINE1 SINE B4 -1 164 3 2 1116 247 274 227 86 chr13 69622712 69622968 -50661344 - MLT1A LTR MaLR 0 408 117 2 1116 1358 75 32 0 chr13 69623585 69623773 -50660539 + B2_Mm2 SINE B2 2 195 0 2 1116 305 274 10 21 chr13 69624022 69624119 -50660193 + L1MA5 LINE L1 6205 6300 0 2 1116 308 261 33 50 chr13 69624125 69624246 -50660066 + L1M LINE L1 5278 5396 -2599 2 1116 312 271 102 20 chr13 69624395 69624493 -50659819 + MER20 DNA MER1_type 95 200 -19 2 1116 1034 167 318 24 chr13 69624546 69624835 -50659477 - ORR1D1 LTR MaLR 0 374 1 2 1116 765 268 136 30 chr13 69624835 69625059 -50659253 + ORR1E LTR MaLR 18 267 -92 2 1116 261 0 0 0 chr13 69625060 69625089 -50659223 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1116 265 280 58 47 chr13 69625255 69625341 -50658971 - MLT1A LTR MaLR -283 91 5 2 1116 679 233 55 50 chr13 69626069 69626250 -50658062 + B3A SINE B2 15 196 -2 2 1116 1331 117 16 0 chr13 69626272 69626460 -50657852 + B2_Mm2 SINE B2 1 191 -4 2 1116 635 192 185 0 chr13 69628012 69628163 -50656149 + B3 SINE B2 1 179 -37 2 1116 333 68 0 0 chr13 69628525 69628569 -50655743 + (TCTG)n Simple_repeat Simple_repeat 4 47 0 2 1116 2793 203 113 94 chr13 69628876 69629720 -50654592 - RMER13A LTR ERVK 0 860 1 2 1116 311 250 142 33 chr13 69630126 69630246 -50654066 + RMER30 DNA MER1_type 8 140 -62 2 1116 462 268 76 101 chr13 69630732 69631060 -50653252 - RLTR15 LTR ERVK -37 322 3 2 1116 3113 148 43 13 chr13 69632637 69633177 -50651135 + RLTR31_Mm LTR ERVK 1 556 -5 2 1116 524 311 293 22 chr13 69633622 69633938 -50650374 - MER54A LTR ERVL -484 417 16 2 1116 1304 102 32 0 chr13 69634530 69634717 -50649595 + B2_Mm1a SINE B2 1 193 0 2 1116 415 203 299 7 chr13 69634991 69635145 -50649167 - B4 SINE B4 -92 200 2 2 1116 1327 91 11 0 chr13 69635613 69635789 -50648523 + B2_Mm1t SINE B2 2 179 -14 2 1116 376 110 378 0 chr13 69635837 69635923 -50648389 + B2_Mm2 SINE B2 48 169 -26 2 1116 720 64 0 0 chr13 69635924 69636018 -50648294 + (GGAA)n Simple_repeat Simple_repeat 4 97 0 2 1116 22 0 0 0 chr13 69637186 69637208 -50647104 + AT_rich Low_complexity Low_complexity 1 22 0 2 1116 466 72 0 0 chr13 69639203 69639272 -50645040 + Lx5 LINE L1 6647 6715 -335 2 1116 347 213 35 21 chr13 69641522 69641666 -50642646 + (CA)n Simple_repeat Simple_repeat 2 147 0 2 1116 278 310 180 9 chr13 69642128 69642356 -50641956 + Charlie5 DNA MER1_type 2302 2568 -56 2 1116 4653 78 11 8 chr13 69644434 69645064 -50639248 + L1_Mus4 LINE L1 5998 6629 -7 2 1116 246 362 0 0 chr13 69647393 69647570 -50636742 + (CATA)n Simple_repeat Simple_repeat 2 178 0 2 1116 564 273 62 0 chr13 69647691 69647819 -50636493 + B1F SINE Alu 4 139 -10 2 1116 591 266 35 0 chr13 69647953 69648096 -50636216 + B1F1 SINE Alu 2 149 0 2 1116 520 204 240 13 chr13 69648605 69648759 -50635553 - B2_Mm2 SINE B2 -6 189 1 2 1116 1620 0 9 0 chr13 69650045 69650261 -50634051 + (GAGAA)n Simple_repeat Simple_repeat 1 218 0 2 1116 621 0 0 0 chr13 69650266 69650335 -50633977 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 1116 432 0 0 0 chr13 69651388 69651436 -50632876 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1116 261 345 26 26 chr13 69652570 69652683 -50631629 + MLT1A0 LTR MaLR 253 365 0 2 1116 446 192 129 20 chr13 69654187 69654288 -50630024 - PB1D9 SINE Alu -8 112 1 2 1116 1253 54 0 0 chr13 69654804 69654951 -50629361 + B1_Mm SINE Alu 1 147 0 2 1116 986 115 6 17 chr13 69654957 69655134 -50629178 + (GAA)n Simple_repeat Simple_repeat 2 176 0 2 1116 827 241 48 33 chr13 69655206 69655416 -50628896 + B3 SINE B2 1 213 -3 2 1116 887 250 14 36 chr13 69655430 69655650 -50628662 - B3 SINE B2 0 216 2 2 1116 513 0 0 0 chr13 69656275 69656332 -50627980 + (CA)n Simple_repeat Simple_repeat 1 57 0 2 1116 351 235 71 0 chr13 69657224 69657322 -50626990 + PB1D10 SINE Alu 5 109 -8 2 1116 860 196 121 5 chr13 69657914 69658104 -50626208 + B3 SINE B2 1 212 -4 2 1116 690 236 7 0 chr13 69658463 69658607 -50625705 - B1_Mur1 SINE Alu -2 147 3 2 1116 192 143 0 0 chr13 69659084 69659126 -50625186 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1116 756 269 61 88 chr13 69659416 69659746 -50624566 - MTD LTR MaLR -18 401 81 2 1116 1225 48 7 0 chr13 69659808 69659954 -50624358 + B1_Mus2 SINE Alu 1 147 0 2 1116 271 353 12 0 chr13 69662828 69662913 -50621399 + PB1D10 SINE Alu 2 87 -30 2 1116 286 220 112 55 chr13 69663854 69664024 -50620288 + MIRc SINE MIR 15 190 -18 2 1116 225 259 45 80 chr13 69664925 69665013 -50619299 - Charlie5 DNA MER1_type -2534 90 6 2 1116 396 0 0 0 chr13 69665237 69665281 -50619031 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1116 1620 200 24 12 chr13 69665889 69666223 -50618089 + Lx2B LINE L1 6648 6985 -15 2 1116 207 0 0 0 chr13 69666607 69666630 -50617682 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 1116 525 276 59 65 chr13 69668218 69668404 -50615908 + B3A SINE B2 2 186 -12 2 1116 23 54 0 0 chr13 69668427 69668464 -50615848 + AT_rich Low_complexity Low_complexity 1 37 0 2 1116 29 28 0 0 chr13 69672406 69672442 -50611870 + GC_rich Low_complexity Low_complexity 1 36 0 2 1116 231 88 0 0 chr13 69672707 69672741 -50611571 + (CGA)n Simple_repeat Simple_repeat 2 35 0 2 1116 54 77 0 0 chr13 69672795 69672912 -50611400 + GC_rich Low_complexity Low_complexity 1 117 0 2 1116 24 0 0 0 chr13 69673063 69673087 -50611225 + GC_rich Low_complexity Low_complexity 1 24 0 2 1116 257 68 0 22 chr13 69673090 69673135 -50611177 + (CCCCG)n Simple_repeat Simple_repeat 2 45 0 2 1116 218 204 42 21 chr13 69673195 69673290 -50611022 + (CGG)n Simple_repeat Simple_repeat 2 98 0 2 1116 43 47 0 0 chr13 69673466 69673530 -50610782 + GC_rich Low_complexity Low_complexity 1 64 0 2 1116 293 241 4 40 chr13 69674301 69674401 -50609911 + B1F SINE Alu 7 99 -49 2 1116 184 333 125 0 chr13 69674705 69674825 -50609487 + L2 LINE L2 2802 2936 -483 2 1116 205 161 0 0 chr13 69674866 69674897 -50609415 + L2 LINE L2 3019 3049 -370 2 1116 394 327 135 23 chr13 69674972 69675238 -50609074 - MLT1C LTR MaLR -99 368 73 2 1116 794 76 244 0 chr13 69675710 69675829 -50608483 - B1_Mus1 SINE Alu 0 148 1 2 1116 924 221 42 38 chr13 69675855 69676067 -50608245 - B3 SINE B2 -1 215 3 2 1116 618 221 20 40 chr13 69676690 69676841 -50607471 - B3 SINE B2 -2 214 67 2 1116 2621 182 59 31 chr13 69678789 69679243 -50605069 + RLTR20B2 LTR ERVK 1 469 -91 2 1116 207 0 0 0 chr13 69679243 69679266 -50605046 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1116 2621 182 59 31 chr13 69679266 69679356 -50604956 + RLTR20B2 LTR ERVK 470 559 -1 2 1116 406 324 138 36 chr13 69679561 69679814 -50604498 - MLT1J2 LTR MaLR -113 335 57 2 1116 394 289 48 0 chr13 69680961 69681065 -50603247 - B1F SINE Alu -39 110 2 2 1116 198 0 0 0 chr13 69681080 69681102 -50603210 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1116 1145 88 0 7 chr13 69681104 69681252 -50603060 - B1_Mus1 SINE Alu 0 148 2 3 1116 279 0 0 0 chr13 69682932 69682963 -50601349 + (CCCCCA)n Simple_repeat Simple_repeat 2 32 0 3 1116 186 43 0 0 chr13 69683553 69683576 -50600736 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 3 1116 1249 62 12 0 chr13 69683576 69683736 -50600576 - B2_Mm2 SINE B2 -33 162 1 3 1116 702 276 100 53 chr13 69684738 69685098 -50599214 + RMER5 LTR ERV1 158 534 0 3 1116 180 0 0 0 chr13 69686417 69686437 -50597875 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1116 1979 199 55 0 chr13 69689381 69689778 -50594534 - ORR1D1-int LTR MaLR -951 419 1 3 1116 2283 153 3 24 chr13 69689778 69690160 -50594152 - ORR1D1 LTR MaLR 0 374 1 3 1116 757 145 159 32 chr13 69690372 69690529 -50593783 + B2_Mm2 SINE B2 1 177 -18 3 1116 225 188 47 0 chr13 69690529 69690593 -50593719 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1116 482 294 99 28 chr13 69690598 69690780 -50593532 + B3A SINE B2 4 198 0 3 1116 1478 165 113 0 chr13 69690800 69691109 -50593203 + Lx9 LINE L1 7299 7642 -2 3 1116 677 299 122 73 chr13 69691144 69691487 -50592825 - MTE2a LTR MaLR -15 364 5 3 1116 390 302 12 25 chr13 69691562 69691725 -50592587 + L1M5 LINE L1 4559 4719 -1427 3 1116 293 14 40 68 chr13 69691943 69692017 -50592295 + (CAAAA)n Simple_repeat Simple_repeat 2 73 0 3 1116 330 238 173 20 chr13 69692021 69692171 -50592141 - B2_Mm2 SINE B2 -14 181 9 3 1116 1128 102 71 6 chr13 69692550 69692718 -50591594 + B2_Mm2 SINE B2 3 181 -14 3 1116 951 82 7 13 chr13 69692742 69692891 -50591421 + (GAA)n Simple_repeat Simple_repeat 1 148 0 3 1116 243 0 0 0 chr13 69692891 69692918 -50591394 + (CAG)n Simple_repeat Simple_repeat 1 27 0 3 1116 893 291 98 18 chr13 69693427 69693753 -50590559 + Lx8 LINE L1 7120 7471 -2 3 1116 572 312 86 86 chr13 69693903 69694366 -50589946 - MLT1D LTR MaLR -4 501 39 3 1116 186 240 0 0 chr13 69694648 69694698 -50589614 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1116 1341 66 50 0 chr13 69694772 69694954 -50589358 + B2_Mm1a SINE B2 1 191 -2 3 1116 652 147 187 5 chr13 69695512 69695650 -50588662 - Lx9 LINE L1 0 7644 7496 3 1116 270 0 0 0 chr13 69695650 69695680 -50588632 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1116 652 147 187 5 chr13 69695680 69695739 -50588573 - Lx9 LINE L1 -149 7495 7412 3 1116 420 207 25 0 chr13 69695904 69696025 -50588287 + GA-rich Low_complexity Low_complexity 3 126 0 3 1116 476 277 123 58 chr13 69696832 69697158 -50587154 + MLT1B LTR MaLR 34 380 -10 3 1116 4240 82 0 2 chr13 69697484 69698032 -50586280 - L1_Mus1 LINE L1 0 6567 6021 3 1116 363 340 90 24 chr13 69698141 69698411 -50585901 - ERVL-E-int LTR ERVL -3432 2235 1956 3 1116 513 0 0 0 chr13 69698411 69698468 -50585844 + (TC)n Simple_repeat Simple_repeat 1 57 0 3 1116 363 340 90 24 chr13 69698468 69698607 -50585705 - ERVL-E-int LTR ERVL -3712 1955 1800 3 1116 301 192 87 36 chr13 69699150 69699243 -50585069 + B1_Mur1 SINE Alu 51 149 0 3 1116 428 308 20 33 chr13 69699268 69699419 -50584893 + RSINE1 SINE B4 16 164 -1 3 1116 412 283 0 10 chr13 69699451 69699551 -50584761 + PB1D10 SINE Alu 1 99 -18 3 1116 474 18 0 0 chr13 69699564 69699619 -50584693 + (TAAA)n Simple_repeat Simple_repeat 1 55 0 3 1116 912 67 0 0 chr13 69699656 69699776 -50584536 + (TTC)n Simple_repeat Simple_repeat 2 121 0 3 1116 687 262 7 7 chr13 69699829 69699971 -50584341 - RSINE1 SINE B4 -22 143 2 3 1116 1437 65 0 5 chr13 69700099 69700286 -50584026 - B2_Mm2 SINE B2 0 195 10 3 1116 1012 179 29 44 chr13 69700286 69700491 -50583821 - B3 SINE B2 -10 206 5 3 1116 420 257 119 27 chr13 69700507 69700747 -50583565 - L1MC LINE L1 -722 5611 5356 3 1116 185 365 40 0 chr13 69702173 69702247 -50582065 - MIR SINE MIR -168 94 18 3 1116 2170 147 55 48 chr13 69702341 69702778 -50581534 + RMER5 LTR ERV1 1 440 -94 3 1116 1027 122 0 13 chr13 69703774 69703923 -50580389 - B1_Mur3 SINE Alu -1 148 2 3 1116 3568 66 2 60 chr13 69704012 69704256 -50580056 + L1_Mus2 LINE L1 6095 6338 -228 3 1116 976 178 106 106 chr13 69704256 69704577 -50579735 - RLTRETN_Mm LTR ERVK 0 322 2 3 1116 3568 66 2 60 chr13 69704577 69704833 -50579479 + L1_Mus2 LINE L1 6339 6566 0 3 1116 1218 48 0 14 chr13 69704879 69705027 -50579285 + B1_Mus2 SINE Alu 2 147 0 3 1116 234 0 0 0 chr13 69705163 69705189 -50579123 + (TCTA)n Simple_repeat Simple_repeat 1 26 0 3 1116 1397 84 11 0 chr13 69705448 69705638 -50578674 + B2_Mm1t SINE B2 2 193 0 3 1116 276 30 0 0 chr13 69705638 69705671 -50578641 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 3 1116 684 0 0 0 chr13 69706031 69706107 -50578205 + (TTCC)n Simple_repeat Simple_repeat 4 79 0 3 1116 545 194 0 69 chr13 69706108 69706224 -50578088 - B1_Mur2 SINE Alu -6 143 36 3 1116 2810 164 37 13 chr13 69706375 69706919 -50577393 + RMER5 LTR ERV1 19 526 -8 3 1116 957 236 159 117 chr13 69706996 69707519 -50576793 - RMER4B LTR ERVK -24 561 17 3 1116 1154 82 0 0 chr13 69707743 69707889 -50576423 + B1_Mus2 SINE Alu 2 147 0 3 1116 574 225 33 0 chr13 69707890 69708010 -50576302 - B1F SINE Alu -23 126 3 3 1116 347 291 49 142 chr13 69708010 69708112 -50576200 - B4 SINE B4 -197 95 13 3 1116 1409 74 5 5 chr13 69708623 69708813 -50575499 - B2_Mm2 SINE B2 -4 191 2 3 1116 881 218 41 15 chr13 69708840 69709036 -50575276 + B3 SINE B2 16 216 0 3 1116 482 209 16 73 chr13 69709601 69709725 -50574587 + PB1D10 SINE Alu 1 117 0 3 1116 223 261 250 0 chr13 69709867 69709959 -50574353 - B3A SINE B2 -22 176 62 3 1116 1814 180 114 46 chr13 69710139 69710430 -50573882 + RLTR31A_Mm LTR ERVK 3 322 -262 3 1116 1557 43 5 0 chr13 69710430 69710617 -50573695 + B2_Mm1a SINE B2 1 188 -5 3 1116 1814 180 114 46 chr13 69710617 69710843 -50573469 + RLTR31A_Mm LTR ERVK 323 555 -29 3 1116 316 306 117 65 chr13 69710835 69711066 -50573246 + RLTR31A_Mm LTR ERVK 342 584 0 3 1116 896 173 39 77 chr13 69711110 69711317 -50572995 + B3 SINE B2 5 203 -13 3 1116 1229 55 0 0 chr13 69711944 69712090 -50572222 + B1_Mus2 SINE Alu 2 147 0 3 1116 298 266 16 0 chr13 69712523 69712587 -50571725 + ID2 SINE ID 10 74 -9 3 1116 23 0 0 0 chr13 69713441 69713464 -50570848 + AT_rich Low_complexity Low_complexity 1 23 0 3 1116 1248 62 0 0 chr13 69714197 69714359 -50569953 + (TG)n Simple_repeat Simple_repeat 2 163 0 3 1116 469 317 28 14 chr13 69714363 69714507 -50569805 - RSINE1 SINE B4 -17 148 3 3 1116 1004 256 56 84 chr13 69714656 69715048 -50569264 + BGLII_B LTR ERVK 1 381 -60 3 1116 1534 152 51 81 chr13 69715052 69715520 -50568792 + RMER17C LTR ERVK 20 438 -520 3 1116 195 69 0 0 chr13 69717142 69717171 -50567141 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1116 8552 12 0 0 chr13 69717173 69718234 -50566078 - L1Md_A LINE L1 -2 6580 5520 3 1116 9714 8 0 0 chr13 69718231 69719355 -50564957 + L1_Mm LINE L1 4490 5613 -270 3 1116 1861 120 64 81 chr13 69719620 69720029 -50564283 + RMER17C LTR ERVK 1 402 -8 3 1116 335 242 0 10 chr13 69720244 69720344 -50563968 + (TA)n Simple_repeat Simple_repeat 1 99 0 3 1116 342 219 137 0 chr13 69720427 69720500 -50563812 - PB1 SINE Alu -11 116 34 3 1116 830 85 8 0 chr13 69721013 69721131 -50563181 - ORR1B2 LTR MaLR 0 367 249 3 1116 354 197 15 0 chr13 69721127 69721193 -50563119 - ORR1B2 LTR MaLR -297 70 4 3 1116 233 300 22 11 chr13 69721292 69721383 -50562929 - LTR86B1 LTR ERVL -387 106 15 3 1116 2180 154 96 0 chr13 69721487 69721851 -50562461 - MTC LTR MaLR -8 413 15 3 1116 333 0 0 0 chr13 69723680 69723717 -50560595 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 1116 540 0 0 0 chr13 69723812 69723872 -50560440 + (GA)n Simple_repeat Simple_repeat 2 61 0 3 1116 1743 131 140 14 chr13 69723982 69724186 -50560126 - RMER17C LTR ERVK 0 410 186 3 1116 968 0 0 9 chr13 69724186 69724299 -50560013 + (GAGAA)n Simple_repeat Simple_repeat 5 116 0 3 1116 1743 131 140 14 chr13 69724299 69724458 -50559854 - RMER17C LTR ERVK -225 185 1 3 1116 1155 210 188 33 chr13 69724866 69725009 -50559303 + ORR1C2 LTR MaLR 1 185 -199 3 1116 258 32 0 0 chr13 69725009 69725040 -50559272 + (TCTCCC)n Simple_repeat Simple_repeat 2 32 0 3 1116 1155 210 188 33 chr13 69725040 69725226 -50559086 + ORR1C2 LTR MaLR 186 381 -3 3 1116 270 95 0 0 chr13 69726120 69726162 -50558150 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1116 723 224 0 0 chr13 69728795 69729064 -50555248 + (TG)n Simple_repeat Simple_repeat 1 269 0 3 1116 615 215 14 69 chr13 69729376 69729521 -50554791 + RSINE1 SINE B4 27 163 -2 3 1116 211 216 0 0 chr13 69729528 69729565 -50554747 + (ATG)n Simple_repeat Simple_repeat 3 39 0 3 1116 1452 74 11 0 chr13 69729798 69729988 -50554324 - B2_Mm1t SINE B2 0 193 2 3 1116 655 235 90 19 chr13 69730128 69730284 -50554028 + B4 SINE B4 11 177 -115 3 1117 485 271 0 163 chr13 69731443 69731615 -50552697 + B1_Mur1 SINE Alu 1 144 -5 3 1117 713 238 204 28 chr13 69731756 69732045 -50552267 + ORR1E LTR MaLR 11 350 -9 3 1117 572 328 121 15 chr13 69732443 69732715 -50551597 + RMER15 LTR ERVL 275 575 0 3 1117 342 0 0 0 chr13 69733340 69733378 -50550934 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1117 247 292 0 15 chr13 69735417 69735483 -50548829 + MTEb LTR MaLR 4 68 -311 3 1117 471 254 16 48 chr13 69735512 69735636 -50548676 + MTEb LTR MaLR 132 251 -128 3 1117 243 203 159 0 chr13 69735778 69735847 -50548465 + B4 SINE B4 2 81 -211 3 1117 1116 105 74 0 chr13 69735785 69735947 -50548365 + B2_Mm2 SINE B2 20 193 -2 3 1117 1547 53 11 0 chr13 69735961 69736149 -50548163 + B2_Mm1a SINE B2 1 190 -3 3 1117 1545 241 72 13 chr13 69736238 69736624 -50547688 + MTE-int LTR MaLR 89 497 -1083 3 1117 1352 214 25 7 chr13 69736736 69737014 -50547298 + MTEa LTR MaLR 97 379 0 4 1117 1040 301 53 32 chr13 69738144 69738580 -50545732 + Lx9 LINE L1 6983 7427 -217 4 1117 180 0 0 0 chr13 69738616 69738636 -50545676 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 1117 1333 84 13 32 chr13 69738754 69738968 -50545344 + B2_Mm2 SINE B2 1 214 -2 4 1117 201 147 0 0 chr13 69739599 69739633 -50544679 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1117 318 338 0 0 chr13 69739712 69739783 -50544529 + B4 SINE B4 3 73 -219 4 1117 1163 75 7 0 chr13 69739792 69739938 -50544374 - B1_Mus2 SINE Alu 0 147 1 4 1117 713 325 160 6 chr13 69740347 69740852 -50543460 + Cheshire DNA MER1_type 1411 1993 -427 4 1117 460 267 22 29 chr13 69740908 69741047 -50543265 + Lx9 LINE L1 6378 6515 -1129 4 1117 215 345 44 26 chr13 69741249 69741362 -50542950 + L2 LINE L2 2708 2822 -597 4 1117 293 264 0 0 chr13 69741584 69741656 -50542656 + L1MA4 LINE L1 5859 5930 -370 4 1117 268 206 40 0 chr13 69741661 69741787 -50542525 + (TA)n Simple_repeat Simple_repeat 1 131 0 4 1117 229 274 0 31 chr13 69741907 69741971 -50542341 + G-rich Low_complexity Low_complexity 4 65 0 4 1117 203 211 42 14 chr13 69741978 69742050 -50542262 + (TTAAA)n Simple_repeat Simple_repeat 2 75 0 4 1117 638 231 0 63 chr13 69742670 69742813 -50541499 + B1_Mur1 SINE Alu 1 134 -15 4 1117 315 71 0 0 chr13 69742961 69743003 -50541309 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4 1117 633 263 131 112 chr13 69743035 69743348 -50540964 + ORR1D2 LTR MaLR 1 319 -55 4 1117 228 67 0 0 chr13 69743955 69743985 -50540327 + (CAGG)n Simple_repeat Simple_repeat 1 30 0 4 1117 309 250 0 0 chr13 69744012 69744080 -50540232 + PB1D10 SINE Alu 49 116 -1 4 1117 328 255 125 58 chr13 69744081 69744289 -50540023 + MER65-int LTR ERV1 1544 1765 -3106 4 1117 309 266 198 26 chr13 69744434 69744550 -50539762 + B3 SINE B2 72 207 -9 4 1117 893 143 2 17 chr13 69744909 69745061 -50539251 + B1_Mus2 SINE Alu 2 147 0 4 1117 352 207 0 0 chr13 69745626 69745684 -50538628 - PB1D10 SINE Alu -1 116 59 4 1117 1467 163 112 9 chr13 69745762 69746082 -50538230 + ORR1B1 LTR MaLR 1 394 0 4 1117 895 119 41 20 chr13 69746108 69746254 -50538058 + B1_Mur3 SINE Alu 1 149 0 4 1117 257 247 0 129 chr13 69746950 69747136 -50537176 + MER65-int LTR ERV1 1989 2150 -4608 4 1117 315 179 0 0 chr13 69748441 69748508 -50535804 + GA-rich Low_complexity Low_complexity 3 69 0 4 1117 234 286 24 72 chr13 69748509 69748592 -50535720 - RSINE1 SINE B4 -14 151 73 4 1117 281 219 77 15 chr13 69748696 69748761 -50535551 - B4A SINE B4 -223 69 1 4 1117 511 250 57 69 chr13 69748877 69748892 -50535420 + ID_B1 SINE B4 65 215 -9 4 1117 847 173 0 15 chr13 69748892 69749027 -50535285 + B1_Mur4 SINE Alu 9 141 -9 4 1117 185 0 40 0 chr13 69749027 69749052 -50535260 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1117 25 0 0 0 chr13 69750972 69750997 -50533315 + GC_rich Low_complexity Low_complexity 1 25 0 4 1117 932 127 115 44 chr13 69752035 69752217 -50532095 - B2_Mm2 SINE B2 0 195 1 4 1117 432 177 234 24 chr13 69752240 69752363 -50531949 - B1_Mus2 SINE Alu -1 146 1 4 1117 881 141 106 31 chr13 69752369 69752530 -50531782 - B2_Mm2 SINE B2 -22 173 1 4 1117 439 221 127 32 chr13 69753148 69753274 -50531038 - B1_Mur1 SINE Alu -8 141 4 4 1117 1177 55 0 7 chr13 69758025 69758172 -50526140 - B1_Mus2 SINE Alu 0 147 2 4 1117 771 69 0 0 chr13 69758740 69758842 -50525470 + (CA)n Simple_repeat Simple_repeat 2 103 0 4 1117 21 0 0 0 chr13 69759483 69759504 -50524808 + AT_rich Low_complexity Low_complexity 1 21 0 4 1117 229 218 0 114 chr13 69759928 69760016 -50524296 - MER45R DNA Tip100 -576 1005 928 4 1117 704 201 190 31 chr13 69760693 69760813 -50523499 + URR1A DNA MER1_type 1 157 -69 4 1117 1237 55 0 0 chr13 69760813 69760959 -50523353 + B1_Mm SINE Alu 1 146 -1 4 1117 704 201 190 31 chr13 69760959 69761033 -50523279 + URR1A DNA MER1_type 158 226 0 4 1117 852 138 21 28 chr13 69761074 69761216 -50523096 + B1_Mus2 SINE Alu 6 146 -1 4 1117 643 211 193 6 chr13 69761365 69761546 -50522766 - B3 SINE B2 -1 215 1 4 1117 465 19 0 0 chr13 69763838 69763892 -50520420 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 1117 222 37 0 0 chr13 69764308 69764335 -50519977 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1117 1163 63 0 0 chr13 69764338 69764480 -50519832 - B1_Mus2 SINE Alu -4 143 2 4 1117 367 306 244 0 chr13 69764917 69765126 -50519186 - L1MB7 LINE L1 -9 6175 5916 4 1117 718 71 259 0 chr13 69765133 69765245 -50519067 + B1_Mus1 SINE Alu 2 142 -6 4 1117 354 337 85 6 chr13 69767517 69767693 -50516619 + MER33 DNA MER1_type 127 316 -8 4 1117 239 293 157 12 chr13 69770752 69770835 -50513477 + PB1D10 SINE Alu 1 95 -22 4 1117 307 232 188 0 chr13 69770767 69770836 -50513476 + ID_B1 SINE B4 96 177 -47 4 1117 917 78 252 7 chr13 69771343 69771498 -50512814 - B2_Mm2 SINE B2 -2 193 1 4 1117 389 360 14 62 chr13 69771557 69771702 -50512610 - RSINE1 SINE B4 -25 140 3 4 1117 552 30 0 0 chr13 69771884 69771950 -50512362 + (TCCC)n Simple_repeat Simple_repeat 2 67 0 4 1117 277 242 113 68 chr13 69773671 69773804 -50510508 + RMER15 LTR ERVL 347 485 -90 4 1117 322 280 140 0 chr13 69774286 69774379 -50509933 - PB1D10 SINE Alu -6 111 6 4 1117 713 235 104 17 chr13 69774768 69774941 -50509371 + B3A SINE B2 1 188 -10 4 1117 845 42 246 0 chr13 69774951 69775069 -50509243 + B1_Mm SINE Alu 1 147 0 4 1117 956 125 6 91 chr13 69776878 69776933 -50507379 + ORR1B1 LTR MaLR 232 284 -110 4 1117 1036 199 145 115 chr13 69776933 69777375 -50506937 - RMER6B LTR ERVK -2 459 5 4 1117 956 125 6 91 chr13 69777375 69777495 -50506817 + ORR1B1 LTR MaLR 285 392 -2 4 1117 5716 187 133 8 chr13 69777493 69778833 -50505479 + ORR1B1-int LTR MaLR 1 1507 -2 4 1117 556 133 133 0 chr13 69778835 69778940 -50505372 + ORR1B1 LTR MaLR 9 127 -267 4 1117 257 339 23 30 chr13 69779438 69779569 -50504743 - MLT1A0 LTR MaLR -204 161 32 4 1117 317 220 167 20 chr13 69780011 69780113 -50504199 + RMER10B LTR ERVL 271 387 -11 4 1117 779 264 71 148 chr13 69780187 69780565 -50503747 + MTE2a LTR MaLR 20 368 -11 4 1117 623 246 143 26 chr13 69780582 69780796 -50503516 + MTE2a-int LTR MaLR 31 243 -1337 4 1117 331 277 111 73 chr13 69780789 69781111 -50503201 + MTE2a-int LTR MaLR 838 1384 -196 4 1117 933 171 146 28 chr13 69781810 69782043 -50502269 - ORR1B1 LTR MaLR -141 253 15 4 1117 1380 155 17 8 chr13 69782035 69782269 -50502043 - ORR1B1-int LTR MaLR -191 1318 1083 4 1117 327 146 0 0 chr13 69782490 69782545 -50501767 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1117 536 229 65 8 chr13 69783048 69783171 -50501141 - RMER5 LTR ERV1 -17 517 388 4 1117 351 252 50 93 chr13 69783168 69783308 -50501004 - B3A SINE B2 0 198 65 4 1117 356 256 54 32 chr13 69784074 69784167 -50500145 + RSINE1 SINE B4 65 159 -6 4 1117 315 0 0 0 chr13 69784347 69784382 -50499930 + (TC)n Simple_repeat Simple_repeat 1 35 0 4 1117 423 0 0 0 chr13 69784382 69784428 -50499884 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1117 182 309 29 0 chr13 69784930 69784998 -50499314 + MER5B DNA MER1_type 4 73 -105 4 1117 240 385 57 0 chr13 69785508 69785630 -50498682 + MLT1E1 LTR MaLR 4 132 -522 4 1117 32436 90 12 15 chr13 69786962 69792859 -50491453 - L1_Mus2 LINE L1 0 6566 671 4 1117 1300 242 146 42 chr13 69792926 69793400 -50490912 - Lx6 LINE L1 -220 7240 6529 4 1117 1712 26 0 0 chr13 69793790 69793982 -50490330 - B2_Mm1a SINE B2 -1 192 1 4 1117 2594 249 137 1 chr13 69794394 69795087 -50489225 - Lx6 LINE L1 -700 6760 5974 4 1117 552 236 198 6 chr13 69795288 69795491 -50488821 - MTEa LTR MaLR 0 379 134 4 1117 581 119 10 0 chr13 69795897 69795998 -50488314 + (TG)n Simple_repeat Simple_repeat 2 103 0 4 1117 234 245 0 0 chr13 69796044 69796093 -50488219 + CT-rich Low_complexity Low_complexity 1 49 0 4 1117 317 228 50 12 chr13 69796184 69796264 -50488048 - B1F SINE Alu 0 149 67 4 1117 303 266 229 0 chr13 69796185 69796294 -50488018 - ID_B1 SINE B4 0 224 91 4 1117 1137 128 0 0 chr13 69796316 69796496 -50487816 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1117 24 0 0 0 chr13 69796530 69796554 -50487758 + AT_rich Low_complexity Low_complexity 1 24 0 4 1117 1201 41 0 14 chr13 69796554 69796702 -50487610 - B1_Mm SINE Alu 0 147 2 4 1117 266 287 69 0 chr13 69797317 69797418 -50486894 - B1F SINE Alu -5 144 37 4 1117 560 307 74 4 chr13 69797656 69797914 -50486398 - L1MA7 LINE L1 0 6291 6016 4 1117 316 309 0 0 chr13 69798543 69798624 -50485688 - ID4 SINE ID 0 83 3 4 1117 300 102 0 0 chr13 69798664 69798713 -50485599 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1117 1508 58 5 5 chr13 69799863 69800052 -50484260 + B2_Mm2 SINE B2 1 189 -6 4 1117 3585 111 13 8 chr13 69800121 69800646 -50483666 - Lx LINE L1 -12 6642 6115 4 1117 227 276 39 147 chr13 69800654 69800756 -50483556 + ORR1E LTR MaLR 46 136 -223 4 1117 1262 283 111 34 chr13 69801528 69802051 -50482261 + Lx9 LINE L1 6898 7460 -184 4 1117 460 305 116 79 chr13 69802072 69802609 -50481703 + L1M5 LINE L1 4138 4696 -1450 4 1117 402 39 0 0 chr13 69802609 69802661 -50481651 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1117 1946 180 132 36 chr13 69803027 69803551 -50480761 - RLTR19-int LTR ERVK -4121 2016 1443 4 1117 212 412 0 6 chr13 69803666 69803832 -50480480 + (CCA)n Simple_repeat Simple_repeat 1 165 0 4 1117 1944 112 61 3 chr13 69803972 69804267 -50480045 - ORR1A4 LTR MaLR 0 329 18 4 1117 254 298 73 37 chr13 69804714 69804878 -50479434 - L1M3 LINE L1 -653 5518 5349 4 1117 279 289 62 47 chr13 69804909 69805120 -50479192 - L1M3 LINE L1 -1803 4337 4124 4 1117 23 33 0 0 chr13 69805215 69805245 -50479067 + AT_rich Low_complexity Low_complexity 1 30 0 4 1117 32 43 0 0 chr13 69805256 69805302 -50479010 + AT_rich Low_complexity Low_complexity 1 46 0 4 1117 222 149 21 0 chr13 69805676 69805723 -50478589 + A-rich Low_complexity Low_complexity 6 53 0 5 1117 689 254 120 58 chr13 69805731 69806138 -50478174 + RLTR20D LTR ERVK 1 551 0 5 1117 1958 137 63 37 chr13 69807975 69808292 -50476020 - ORR1B2 LTR MaLR -8 359 32 5 1117 941 119 7 0 chr13 69808298 69808449 -50475863 + (TTTC)n Simple_repeat Simple_repeat 1 152 0 5 1117 1171 43 0 14 chr13 69808449 69808584 -50475728 - B1_Mm SINE Alu -12 135 1 5 1117 1958 137 63 37 chr13 69808584 69808616 -50475696 - ORR1B2 LTR MaLR -336 31 1 5 1117 1022 251 153 15 chr13 69809217 69809544 -50474768 - MTE2b LTR MaLR 0 379 8 5 1117 271 225 28 213 chr13 69809762 69809903 -50474409 - MLT1H2 LTR MaLR 0 489 375 5 1117 1605 222 70 25 chr13 69810361 69810759 -50473553 + MTD LTR MaLR 3 418 -1 5 1117 1077 96 0 0 chr13 69812805 69812941 -50471371 - Lx4A LINE L1 -154 6904 6769 5 1117 730 166 39 13 chr13 69812941 69813094 -50471218 + Lx4A LINE L1 6902 7058 0 5 1117 328 342 131 63 chr13 69813753 69814180 -50470132 - L1MD LINE L1 -1773 4373 3918 5 1117 522 102 74 21 chr13 69814298 69814584 -50469728 + (TAGA)n Simple_repeat Simple_repeat 1 301 0 5 1117 292 207 17 0 chr13 69815690 69815806 -50468506 + CT-rich Low_complexity Low_complexity 1 118 0 5 1117 739 0 11 11 chr13 69815809 69815901 -50468411 + (TCTA)n Simple_repeat Simple_repeat 2 93 0 5 1117 2571 72 12 0 chr13 69815901 69816222 -50468090 + ORR1A2 LTR MaLR 2 326 -1 5 1117 951 112 0 0 chr13 69816230 69816409 -50467903 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 5 1117 258 264 39 108 chr13 69816433 69816602 -50467710 + MLT1B LTR MaLR 37 198 -192 5 1117 980 281 40 83 chr13 69816602 69816998 -50467314 - MTE2a LTR MaLR 0 379 1 5 1117 258 264 39 108 chr13 69816998 69817032 -50467280 + MLT1B LTR MaLR 199 226 -164 5 1117 529 178 21 62 chr13 69817679 69817775 -50466537 + B3A SINE B2 4 95 -103 5 1117 35 41 0 0 chr13 69817824 69817873 -50466439 + AT_rich Low_complexity Low_complexity 1 49 0 5 1117 1658 42 0 0 chr13 69818321 69818513 -50465799 + B2_Mm1t SINE B2 2 193 0 5 1117 212 189 40 13 chr13 69818739 69818814 -50465498 + (TTATA)n Simple_repeat Simple_repeat 5 81 0 5 1117 2597 62 114 3 chr13 69819413 69819771 -50464541 - MTB LTR MaLR -2 398 1 5 1117 239 284 90 45 chr13 69819792 69819925 -50464387 - MIRm SINE MIR -133 143 5 5 1117 351 275 13 90 chr13 69820145 69820301 -50464011 + HAL1-2a_MD LINE L1 2346 2489 -535 5 1117 377 320 25 23 chr13 69820303 69820476 -50463836 + HAL1-2a_MD LINE L1 2355 2505 -519 5 1117 723 260 42 28 chr13 69821856 69821968 -50462344 - ID_B1 SINE B4 -3 221 103 5 1117 2367 60 36 62 chr13 69821968 69822304 -50462008 + ORR1A2 LTR MaLR 1 327 0 5 1117 723 260 42 28 chr13 69822304 69822405 -50461907 - ID_B1 SINE B4 -122 102 5 5 1117 4640 64 5 24 chr13 69822984 69823579 -50460733 + MT2B2 LTR ERVL 1 584 0 5 1117 409 335 78 63 chr13 69823711 69824300 -50460012 + L1MB7 LINE L1 5536 6133 -51 5 1117 221 296 79 90 chr13 69824818 69824996 -50459316 - L2b LINE L2 -11 3364 3189 5 1117 741 12 0 0 chr13 69826367 69826453 -50457859 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 5 1117 5029 152 40 33 chr13 69826454 69826720 -50457592 - RMER19B LTR ERVK -20 882 609 5 1117 2697 109 211 27 chr13 69826720 69827199 -50457113 + RMER2 LTR ERV1 1 567 0 5 1117 5029 152 40 33 chr13 69827199 69827808 -50456504 - RMER19B LTR ERVK -294 608 1 5 1117 1199 138 19 199 chr13 69828861 69829168 -50455144 - ORR1B1 LTR MaLR -142 252 1 5 1117 309 303 75 43 chr13 69831152 69831360 -50452952 + HAL1-3A_ME LINE L1 2272 2439 -419 5 1117 301 243 0 18 chr13 69831360 69831469 -50452843 + G-rich Low_complexity Low_complexity 2 108 0 5 1117 682 276 152 55 chr13 69831623 69831900 -50452412 - MTD LTR MaLR 0 419 113 5 1117 3140 56 8 3 chr13 69831900 69832291 -50452021 + MTA_Mm LTR MaLR 3 395 -1 5 1117 682 276 152 55 chr13 69832291 69832342 -50451970 - MTD LTR MaLR -307 112 59 5 1117 877 285 37 8 chr13 69832344 69832585 -50451727 - B4A SINE B4 -41 251 4 5 1117 315 0 0 0 chr13 69832601 69832636 -50451676 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1117 414 213 26 13 chr13 69832995 69833147 -50451165 + CT-rich Low_complexity Low_complexity 5 158 0 5 1117 2324 146 21 124 chr13 69836850 69837156 -50447156 - MTC LTR MaLR 0 421 121 5 1117 1230 35 7 0 chr13 69837156 69837300 -50447012 + B1_Mm SINE Alu 3 147 0 5 1117 2324 146 21 124 chr13 69837300 69837462 -50446850 - MTC LTR MaLR -301 120 1 5 1117 248 164 0 71 chr13 69837769 69837854 -50446458 + (TAA)n Simple_repeat Simple_repeat 3 81 0 5 1117 21 0 0 0 chr13 69839747 69839768 -50444544 + AT_rich Low_complexity Low_complexity 1 21 0 5 1117 746 288 35 56 chr13 69839779 69840066 -50444246 - B4A SINE B4 -8 284 4 5 1117 708 310 19 0 chr13 69840658 69840874 -50443438 + ID_B1 SINE B4 1 220 -4 5 1117 1083 236 0 9 chr13 69841272 69841486 -50442826 + B3 SINE B2 1 212 -4 5 1117 225 143 0 45 chr13 69841492 69841519 -50442793 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 5 1117 912 70 0 0 chr13 69841519 69841648 -50442664 + (GGAA)n Simple_repeat Simple_repeat 1 129 0 5 1117 225 143 0 45 chr13 69841648 69841664 -50442648 + (CAGA)n Simple_repeat Simple_repeat 2 17 0 5 1117 790 244 0 66 chr13 69843720 69843810 -50440502 + RMER30 DNA MER1_type 5 86 -116 5 1117 180 77 0 0 chr13 69843810 69843836 -50440476 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 1117 790 244 0 66 chr13 69843836 69843956 -50440356 + RMER30 DNA MER1_type 87 201 -1 5 1117 450 0 0 0 chr13 69844953 69845003 -50439309 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1117 998 266 38 32 chr13 69845492 69845807 -50438505 + MTEb LTR MaLR 59 375 -4 5 1117 632 36 12 0 chr13 69845861 69845944 -50438368 + (GA)n Simple_repeat Simple_repeat 1 84 0 5 1117 276 185 0 0 chr13 69846367 69846421 -50437891 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1117 500 315 56 0 chr13 69846436 69846579 -50437733 - B4 SINE B4 -120 172 22 5 1117 450 0 0 0 chr13 69847344 69847394 -50436918 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1117 264 194 161 0 chr13 69847480 69847542 -50436770 + MIR SINE MIR 82 153 -109 5 1117 2895 52 3 0 chr13 69847565 69847910 -50436402 - ORR1A1 LTR MaLR 0 346 1 5 1117 549 0 0 0 chr13 69848862 69848923 -50435389 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1117 662 297 139 44 chr13 69850490 69850807 -50433505 + ORR1E LTR MaLR 5 351 -8 5 1117 1233 114 23 0 chr13 69850814 69850990 -50433322 + B2_Mm2 SINE B2 2 181 -14 5 1117 398 135 281 26 chr13 69851060 69851174 -50433138 + B2_Mm2 SINE B2 47 189 -6 5 1117 348 83 0 0 chr13 69851478 69851526 -50432786 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 5 1117 477 263 40 12 chr13 69851618 69851779 -50432533 - B3 SINE B2 -9 184 14 5 1117 238 354 41 20 chr13 69852376 69852572 -50431740 - MIR SINE MIR -24 238 39 5 1117 962 244 147 27 chr13 69852843 69853186 -50431126 - MTD LTR MaLR -42 377 18 5 1117 753 310 30 0 chr13 69853345 69853548 -50430764 - ID_B1 SINE B4 -14 210 2 5 1117 194 62 0 30 chr13 69854513 69854546 -50429766 + (TGGG)n Simple_repeat Simple_repeat 4 35 0 5 1117 1706 215 77 71 chr13 69855831 69855887 -50428425 - RLTR11A LTR ERVK -17 511 456 5 1117 720 23 0 0 chr13 69855887 69855973 -50428339 + (CA)n Simple_repeat Simple_repeat 1 86 0 5 1117 1706 215 77 71 chr13 69855973 69856421 -50427891 - RLTR11A LTR ERVK -73 455 5 5 1117 216 67 0 0 chr13 69858711 69858741 -50425571 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 5 1117 505 250 10 0 chr13 69858747 69858851 -50425461 - PB1D9 SINE Alu -15 105 1 5 1117 242 290 0 0 chr13 69859197 69859259 -50425053 + (CATATA)n Simple_repeat Simple_repeat 5 66 0 5 1118 1303 31 4 22 chr13 69861425 69861658 -50422654 + (CA)n Simple_repeat Simple_repeat 1 228 0 5 1118 1917 172 18 44 chr13 69863424 69863615 -50420697 - ORR1D1 LTR MaLR 0 374 184 5 1118 882 69 0 0 chr13 69863615 69863746 -50420566 + (GA)n Simple_repeat Simple_repeat 2 132 0 5 1118 1917 172 18 44 chr13 69863746 69863938 -50420374 - ORR1D1 LTR MaLR -191 183 1 5 1118 460 235 37 131 chr13 69864533 69864724 -50419588 - B4A SINE B4 -117 175 3 5 1118 566 235 17 8 chr13 69865625 69865745 -50418567 + B1F SINE Alu 27 147 -2 5 1118 2201 191 256 14 chr13 69865763 69866356 -50417956 + RMER19A LTR ERVK 1 737 0 5 1118 386 229 0 119 chr13 69867261 69867370 -50416942 + B4 SINE B4 115 210 -82 5 1118 204 23 21 85 chr13 69867474 69867521 -50416791 + (CAAAAA)n Simple_repeat Simple_repeat 6 49 0 5 1118 214 300 33 22 chr13 69870314 69870406 -50413906 - L2c LINE L2 -242 3145 3053 5 1118 933 321 55 40 chr13 69872111 69872490 -50411822 + MLT1B LTR MaLR 4 388 -2 5 1118 227 333 0 32 chr13 69872722 69872784 -50411528 + Charlie12 DNA MER1_type 7 66 -2807 5 1118 324 0 0 0 chr13 69872822 69872858 -50411454 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1118 1232 286 74 24 chr13 69872945 69873467 -50410845 + Lx8 LINE L1 6912 7433 -40 5 1118 320 231 2 2 chr13 69874451 69874522 -50409790 + B1F1 SINE Alu 2 72 -55 5 1118 600 27 0 0 chr13 69875762 69875836 -50408476 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 1118 221 0 35 0 chr13 69875954 69875983 -50408329 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1118 414 154 0 0 chr13 69876852 69876930 -50407382 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 1118 286 243 0 48 chr13 69877843 69877990 -50406322 + (CCG)n Simple_repeat Simple_repeat 3 142 0 5 1118 202 118 0 29 chr13 69878045 69878080 -50406232 + (CTG)n Simple_repeat Simple_repeat 2 35 0 5 1118 406 215 0 15 chr13 69880257 69880376 -50403936 + CT-rich Low_complexity Low_complexity 14 131 0 5 1118 231 36 0 0 chr13 69880376 69880404 -50403908 + (CACCAT)n Simple_repeat Simple_repeat 4 31 0 5 1118 406 215 0 15 chr13 69880404 69880416 -50403896 + polypyrimidine Low_complexity Low_complexity 2 13 0 5 1118 1678 236 37 24 chr13 69880534 69880595 -50403717 - MTEb LTR MaLR 0 379 324 5 1118 1972 205 17 19 chr13 69880595 69881017 -50403295 + MTC LTR MaLR 1 421 0 5 1118 1678 236 37 24 chr13 69881017 69881329 -50402983 - MTEb LTR MaLR -56 323 1 5 1118 856 246 5 25 chr13 69882189 69882385 -50401927 + B3A SINE B2 1 192 -6 6 1118 2246 152 66 32 chr13 69882469 69882501 -50401811 + MTC LTR MaLR 1 31 -390 6 1118 3811 108 67 34 chr13 69882501 69883084 -50401228 - RLTR1D LTR ERV1 0 605 4 6 1118 2246 152 66 32 chr13 69883084 69883458 -50400854 + MTC LTR MaLR 32 421 0 6 1118 2103 151 19 19 chr13 69884026 69884391 -50399921 - ORR1B2 LTR MaLR -2 365 1 6 1118 484 263 0 0 chr13 69884735 69884834 -50399478 + PB1D10 SINE Alu 2 100 -17 6 1118 267 379 34 54 chr13 69885098 69885246 -50399066 - MIR SINE MIR -11 251 107 6 1118 1414 87 0 5 chr13 69886057 69886243 -50398069 - B2_Mm2 SINE B2 -10 185 1 6 1118 515 204 66 0 chr13 69886413 69886550 -50397762 - Lx9 LINE L1 0 7644 7499 6 1118 4176 116 6 32 chr13 69886568 69887297 -50397015 + Lx2 LINE L1 5532 6247 -750 6 1118 451 254 26 0 chr13 69887296 69887410 -50396902 - Lx9 LINE L1 -160 7484 7368 6 1118 306 347 169 27 chr13 69887730 69887955 -50396357 - RMER15 LTR ERVL -44 531 275 6 1118 235 230 126 50 chr13 69887984 69888038 -50396274 - RMER15 LTR ERVL -446 129 68 6 1118 3249 105 49 6 chr13 69888038 69888506 -50395806 - Lx4A LINE L1 -1 7057 6570 6 1118 236 230 126 50 chr13 69888506 69888570 -50395742 - RMER15 LTR ERVL -508 67 3 6 1118 828 181 2 36 chr13 69888876 69889381 -50394931 + (TCTCTG)n Simple_repeat Simple_repeat 1 487 0 6 1118 335 204 21 0 chr13 69889393 69889486 -50394826 + (TCTCTG)n Simple_repeat Simple_repeat 4 98 0 6 1118 2868 72 13 0 chr13 69889715 69890089 -50394223 + MTB LTR MaLR 1 379 -21 6 1118 951 301 44 66 chr13 69891158 69891319 -50392993 - L1ME2 LINE L1 -96 6068 5936 6 1118 429 20 0 0 chr13 69891319 69891369 -50392943 + (TCCC)n Simple_repeat Simple_repeat 3 52 0 6 1118 951 301 44 66 chr13 69891369 69891499 -50392813 - L1ME2 LINE L1 -229 5935 5802 6 1118 279 0 0 0 chr13 69891499 69891530 -50392782 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 6 1118 951 301 44 66 chr13 69891530 69891782 -50392530 - L1ME2 LINE L1 -363 5801 5537 6 1118 1479 170 110 29 chr13 69891920 69892265 -50392047 + ORR1D1 LTR MaLR 2 374 0 6 1118 780 250 144 35 chr13 69892681 69892938 -50391374 + Lx8 LINE L1 7179 7463 -10 6 1118 1378 174 8 13 chr13 69893250 69893489 -50390823 - MTC LTR MaLR -8 413 176 6 1118 541 364 0 0 chr13 69893884 69894206 -50390106 + C-rich Low_complexity Low_complexity 1 322 0 6 1118 207 327 0 0 chr13 69894206 69894261 -50390051 + (TCTCTG)n Simple_repeat Simple_repeat 6 60 0 6 1118 189 312 0 0 chr13 69894261 69894338 -50389974 + C-rich Low_complexity Low_complexity 1 77 0 6 1118 243 358 0 0 chr13 69894387 69894566 -50389746 + C-rich Low_complexity Low_complexity 1 179 0 6 1118 406 261 45 0 chr13 69895132 69895220 -50389092 - MTC LTR MaLR -286 93 2 6 1118 339 169 0 0 chr13 69895971 69896042 -50388270 + (TG)n Simple_repeat Simple_repeat 1 71 0 6 1118 256 278 14 0 chr13 69896046 69896118 -50388194 - RSINE1 SINE B4 0 165 93 6 1118 1145 293 56 71 chr13 69896170 69896702 -50387610 + MT2B LTR ERVL 1 601 0 6 1118 1546 264 88 4 chr13 69896899 69897355 -50386957 + Lx8 LINE L1 6973 7466 -7 6 1118 2387 91 0 3 chr13 69897464 69897784 -50386528 + ORR1A2 LTR MaLR 1 319 -8 6 1118 800 269 169 38 chr13 69897792 69898136 -50386176 - MER57C2 LTR ERV1 -1 433 45 6 1118 746 265 37 26 chr13 69898313 69898503 -50385809 - B3 SINE B2 -5 211 20 6 1118 446 300 77 120 chr13 69898584 69898910 -50385402 + MLT1B LTR MaLR 71 382 -8 6 1118 670 204 17 0 chr13 69899357 69899529 -50384783 + (TATG)n Simple_repeat Simple_repeat 4 178 0 6 1118 777 194 0 0 chr13 69899510 69899844 -50384468 + (TG)n Simple_repeat Simple_repeat 1 334 0 6 1118 189 0 0 0 chr13 69900642 69900663 -50383649 + (TG)n Simple_repeat Simple_repeat 1 21 0 6 1118 308 351 48 52 chr13 69901909 69902140 -50382172 + ORR1E LTR MaLR 87 316 -43 6 1118 908 277 135 27 chr13 69902181 69902515 -50381797 - MTEb LTR MaLR -5 374 5 6 1118 645 239 32 30 chr13 69902518 69902698 -50381614 + B3 SINE B2 1 171 -24 6 1118 903 274 59 26 chr13 69902896 69903169 -50381143 + MTE2b LTR MaLR 1 282 -97 6 1118 231 293 82 89 chr13 69904309 69904444 -50379868 + MT2B LTR ERVL 124 257 -344 6 1118 308 295 32 103 chr13 69904331 69904358 -50379954 + ID_B1 SINE B4 72 215 -9 6 1118 573 230 23 47 chr13 69904358 69904486 -50379826 + B1_Mur1 SINE Alu 16 140 -9 6 1118 342 0 0 0 chr13 69904487 69904525 -50379787 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1118 851 148 0 23 chr13 69904648 69904905 -50379407 + GA-rich Low_complexity Low_complexity 1 251 0 6 1118 425 50 17 0 chr13 69905189 69905249 -50379063 + (GA)n Simple_repeat Simple_repeat 1 61 0 6 1118 838 147 171 102 chr13 69905689 69905894 -50378418 + URR1B DNA MER1_type 1 219 -6 6 1118 603 215 25 49 chr13 69905888 69906057 -50378255 + ORR1E LTR MaLR 15 170 -208 6 1118 408 249 138 101 chr13 69906076 69906344 -50377968 + MTE-int LTR MaLR 1 278 -1302 6 1118 413 286 62 56 chr13 69906362 69906540 -50377772 + ORR1E LTR MaLR 201 379 0 6 1118 1859 77 0 0 chr13 69907276 69907511 -50376801 + MT2B2 LTR ERVL 1 235 -349 6 1118 2183 123 25 0 chr13 69907520 69907838 -50376474 + ORR1A3 LTR MaLR 1 326 0 6 1118 572 310 77 30 chr13 69907838 69908071 -50376241 - MTEa LTR MaLR -48 331 88 6 1118 319 238 0 59 chr13 69909143 69909228 -50375084 + B1F SINE Alu 30 109 -40 6 1118 309 296 129 19 chr13 69909633 69909788 -50374524 + MLT1C LTR MaLR 289 460 -7 6 1118 419 304 65 0 chr13 69910661 69910799 -50373513 - MER20 DNA MER1_type -57 162 16 6 1118 231 36 0 0 chr13 69911130 69911158 -50373154 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1118 717 12 0 0 chr13 69911159 69911241 -50373071 + (CCA)n Simple_repeat Simple_repeat 1 82 0 6 1118 944 183 31 54 chr13 69911490 69911751 -50372561 + RMER17C LTR ERVK 1 407 -551 6 1118 1371 23 11 6 chr13 69911751 69911927 -50372385 + (TTCTC)n Simple_repeat Simple_repeat 2 178 0 6 1118 944 159 28 52 chr13 69911927 69911984 -50372328 + RMER17C LTR ERVK 189 246 -164 6 1118 225 0 0 0 chr13 69911984 69912009 -50372303 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 1118 1300 138 12 33 chr13 69912009 69912340 -50371972 + RMER17C LTR ERVK 84 407 -3 6 1118 4110 39 0 12 chr13 69912511 69913006 -50371306 - L1Md_F2 LINE L1 -9 6573 6085 6 1118 504 0 0 0 chr13 69913169 69913225 -50371087 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1118 342 204 0 0 chr13 69913529 69913627 -50370685 + T-rich Low_complexity Low_complexity 1 98 0 6 1118 1019 148 5 21 chr13 69915599 69915774 -50368538 - ORR1B2 LTR MaLR 0 367 193 6 1118 773 297 5 0 chr13 69915774 69915983 -50368329 + ID_B1 SINE B4 4 213 -11 6 1118 282 296 45 90 chr13 69915983 69915999 -50368313 - ORR1B2 LTR MaLR -167 192 179 6 1118 798 120 0 78 chr13 69916320 69916474 -50367838 + Lx4B LINE L1 6907 7048 -10 6 1118 290 26 0 25 chr13 69916474 69916514 -50367798 + (TAA)n Simple_repeat Simple_repeat 2 40 0 6 1118 915 276 16 36 chr13 69916585 69916837 -50367475 + B4 SINE B4 40 286 -6 6 1118 425 19 19 0 chr13 69916870 69916924 -50367388 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1118 1447 69 26 0 chr13 69917768 69917957 -50366355 - B2_Mm2 SINE B2 0 195 2 6 1118 851 301 24 14 chr13 69918267 69918625 -50365687 - L1MA5A LINE L1 -187 5969 5606 6 1118 210 62 61 20 chr13 69918626 69918675 -50365637 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 6 1118 864 196 6 25 chr13 69918748 69918910 -50365402 - RSINE1 SINE B4 0 165 7 6 1118 504 294 79 32 chr13 69918931 69919184 -50365128 - L1MA5A LINE L1 -735 5562 5298 6 1118 409 211 44 44 chr13 69919199 69919313 -50364999 - RLTR23 LTR ERV1 -1 429 316 6 1118 289 280 23 31 chr13 69919741 69919870 -50364442 - L1MA5A LINE L1 -970 5173 5046 6 1118 1371 180 26 22 chr13 69919985 69920252 -50364060 + ORR1C2 LTR MaLR 109 376 -8 6 1118 832 264 77 30 chr13 69920282 69920646 -50363666 - L1MA5A LINE L1 -1176 4967 4587 6 1118 327 290 134 63 chr13 69920674 69920928 -50363384 - L1MA5A LINE L1 -2841 3302 3031 6 1118 533 199 45 185 chr13 69920933 69921155 -50363157 - MTEa LTR MaLR -5 374 184 6 1118 431 343 40 40 chr13 69921605 69921857 -50362455 + MERVK26-int LTR ERVK 65 316 -6603 6 1118 581 227 42 0 chr13 69921864 69921983 -50362329 - MTEa LTR MaLR -248 131 8 6 1118 2650 77 115 3 chr13 69922123 69922489 -50361823 - MTB_Mm LTR MaLR 0 407 1 6 1118 307 290 55 27 chr13 69922532 69922642 -50361670 - L1MD3 LINE L1 -523 7472 7360 6 1118 1201 62 0 0 chr13 69924613 69924759 -50359553 - B1_Mus2 SINE Alu 0 147 2 6 1118 2417 100 0 3 chr13 69924786 69925116 -50359196 + ORR1A4 LTR MaLR 1 329 0 6 1118 221 328 0 17 chr13 69925843 69925902 -50358410 + PB1D7 SINE Alu 30 87 -33 6 1118 2062 197 50 0 chr13 69925884 69926285 -50358027 - RLTR11A LTR ERVK -107 421 1 6 1118 198 71 0 0 chr13 69926341 69926369 -50357943 + (CTAA)n Simple_repeat Simple_repeat 1 28 0 6 1118 266 305 59 0 chr13 69926626 69926744 -50357568 - RSINE1 SINE B4 0 165 41 6 1118 1262 253 100 24 chr13 69926987 69927327 -50356985 - Lx5 LINE L1 0 7050 6685 6 1118 234 321 12 24 chr13 69927418 69927501 -50356811 + MLT1A LTR MaLR 177 258 -116 6 1118 522 0 0 0 chr13 69927508 69927566 -50356746 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1118 312 221 112 0 chr13 69927605 69927688 -50356624 + MIR SINE MIR 64 153 -115 6 1118 541 281 104 60 chr13 69929196 69929367 -50354945 - ORR1E LTR MaLR -9 350 171 6 1118 2373 77 28 43 chr13 69929367 69929694 -50354618 + ORR1A2 LTR MaLR 5 326 -1 6 1118 541 281 104 60 chr13 69929694 69929772 -50354540 - ORR1E LTR MaLR -189 170 90 6 1118 285 217 146 65 chr13 69930071 69930194 -50354118 + ID_B1 SINE B4 84 216 -8 6 1118 263 200 16 40 chr13 69930603 69930728 -50353584 + (CACAC)n Simple_repeat Simple_repeat 1 122 0 6 1118 462 236 11 11 chr13 69930766 69930942 -50353370 + (CATAC)n Simple_repeat Simple_repeat 5 180 0 6 1118 522 0 0 0 chr13 69931331 69931389 -50352923 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1118 405 189 0 0 chr13 69932156 69932251 -50352061 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 1118 2932 46 0 0 chr13 69932523 69932869 -50351443 + L1_Mus1 LINE L1 6222 6567 0 6 1118 338 254 35 17 chr13 69932960 69933076 -50351236 - L1MA6 LINE L1 -152 6148 6031 6 1118 314 244 13 13 chr13 69933100 69933179 -50351133 + ID4 SINE ID 2 80 -3 6 1118 269 312 85 31 chr13 69934165 69934294 -50350018 - MLT1A1 LTR MaLR -16 392 257 6 1118 597 28 0 0 chr13 69934399 69934470 -50349842 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 6 1118 501 17 0 0 chr13 69934515 69934573 -50349739 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1118 1131 253 0 15 chr13 69934574 69934847 -50349465 - Lx9 LINE L1 -189 7455 7187 7 1118 1818 129 92 3 chr13 69934848 69935152 -50349160 - Lx LINE L1 0 6654 6324 7 1118 253 267 111 95 chr13 69935165 69935236 -50349076 - MLT1A1 LTR MaLR -141 224 153 6 1118 513 0 0 0 chr13 69935236 69935293 -50349019 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 7 1118 288 231 125 36 chr13 69935293 69935411 -50348901 - MLT1A1 LTR MaLR -213 152 32 6 1118 382 286 30 67 chr13 69935865 69936000 -50348312 + RMER10B LTR ERVL 269 398 0 7 1118 1306 229 68 10 chr13 69936536 69936831 -50347481 + ORR1D1 LTR MaLR 2 313 -61 7 1118 899 250 6 0 chr13 69938176 69938356 -50345956 + ID_B1 SINE B4 44 224 0 7 1118 219 69 0 0 chr13 69939000 69939029 -50345283 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 7 1118 3250 57 2 19 chr13 69939236 69939650 -50344662 + MTB_Mm LTR MaLR 1 407 0 7 1118 291 190 0 0 chr13 69940251 69940309 -50344003 + (CACCAT)n Simple_repeat Simple_repeat 6 63 0 7 1118 1121 80 6 0 chr13 69940418 69940580 -50343732 + (TTCC)n Simple_repeat Simple_repeat 2 164 0 7 1118 559 156 0 20 chr13 69940933 69941031 -50343281 - ORR1D2 LTR MaLR 0 370 275 7 1118 269 361 24 16 chr13 69941042 69941166 -50343146 + MLT1G1 LTR MaLR 3 127 -452 7 1118 247 361 112 28 chr13 69941184 69941540 -50342772 + MLT1G1 LTR MaLR 180 565 -14 7 1118 11886 183 57 20 chr13 69941662 69943315 -50340997 + MERVL_2A-int LTR ERVL 2684 4386 -1375 7 1118 3314 48 0 8 chr13 69943315 69943714 -50340598 + MTA_Mm LTR MaLR 1 396 0 7 1118 9663 181 47 48 chr13 69943714 69944350 -50339962 + MERVL_2A-int LTR ERVL 4387 5059 -702 7 1118 3517 115 105 4 chr13 69944350 69944892 -50339420 - MT2B LTR ERVL -4 597 1 7 1118 9663 181 47 48 chr13 69944892 69945328 -50338984 + MERVL_2A-int LTR ERVL 5060 5484 -277 7 1118 4315 21 2 0 chr13 69945328 69945809 -50338503 - LTRIS_Mm LTR ERV1 0 482 1 7 1118 9663 181 47 48 chr13 69945809 69946108 -50338204 + MERVL_2A-int LTR ERVL 5485 5761 0 7 1118 1542 238 88 67 chr13 69946108 69946213 -50338099 + MT2A LTR ERVL 1 87 -446 7 1118 602 255 22 7 chr13 69946213 69946351 -50337961 - B1_Mur2 SINE Alu -7 142 3 7 1118 1542 238 88 67 chr13 69946351 69946389 -50337923 + MT2A LTR ERVL 88 130 -403 7 1118 3927 43 21 0 chr13 69946389 69946854 -50337458 + MT2C_Mm LTR ERVL 1 475 0 7 1118 1542 238 88 67 chr13 69946854 69947218 -50337094 + MT2A LTR ERVL 131 520 -13 7 1118 1302 200 101 102 chr13 69947222 69947705 -50336607 + MT2B LTR ERVL 5 565 -36 7 1118 342 0 0 0 chr13 69947705 69947743 -50336569 + (TC)n Simple_repeat Simple_repeat 2 39 0 7 1118 1302 189 43 101 chr13 69947743 69947771 -50336541 + MT2B LTR ERVL 566 588 -13 7 1118 365 322 71 51 chr13 69947826 69948049 -50336263 - L1M5 LINE L1 -2416 3730 3510 7 1118 285 210 0 0 chr13 69948051 69948113 -50336199 + CT-rich Low_complexity Low_complexity 3 64 0 7 1118 736 250 0 35 chr13 69948210 69948380 -50335932 - RSINE1 SINE B4 0 165 2 7 1118 22 56 0 0 chr13 69948676 69948712 -50335600 + GC_rich Low_complexity Low_complexity 1 36 0 7 1118 759 184 28 14 chr13 69950829 69950972 -50333340 + B1_Mus2 SINE Alu 3 147 0 7 1118 546 91 0 0 chr13 69950992 69951069 -50333243 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 7 1118 1230 48 0 0 chr13 69951716 69951861 -50332451 - B1_Mus1 SINE Alu -3 145 1 7 1118 254 284 30 0 chr13 69955440 69955507 -50328805 - MLT1B LTR MaLR -24 366 298 7 1118 194 190 238 12 chr13 69956204 69956284 -50328028 + MIRc SINE MIR 82 179 -89 7 1118 319 302 107 42 chr13 69956341 69956539 -50327773 + MLT1D LTR MaLR 206 395 -72 7 1118 293 337 11 29 chr13 69959367 69959541 -50324771 + (TATATG)n Simple_repeat Simple_repeat 2 172 0 7 1118 264 303 26 0 chr13 69961691 69961767 -50322545 + B4A SINE B4 210 287 -5 7 1118 470 61 15 0 chr13 69961849 69961915 -50322397 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 1118 931 41 52 12 chr13 69963502 69963674 -50320638 + (TG)n Simple_repeat Simple_repeat 2 180 0 7 1118 711 114 22 28 chr13 69963688 69963868 -50320444 + (TG)n Simple_repeat Simple_repeat 2 180 0 7 1118 457 193 98 73 chr13 69963869 69963992 -50320320 - B4 SINE B4 0 292 167 7 1118 321 300 65 32 chr13 69966429 69966553 -50317759 + MLT1C LTR MaLR 1 128 -339 7 1118 393 103 0 0 chr13 69966732 69966800 -50317512 + (TCTG)n Simple_repeat Simple_repeat 2 69 0 7 1118 204 40 0 0 chr13 69966800 69966825 -50317487 + (CA)n Simple_repeat Simple_repeat 1 25 0 7 1118 231 36 0 0 chr13 69967327 69967355 -50316957 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 1118 737 31 0 10 chr13 69967653 69967750 -50316562 + (GA)n Simple_repeat Simple_repeat 2 97 0 7 1118 185 0 40 0 chr13 69968360 69968385 -50315927 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 7 1118 283 121 35 0 chr13 69968481 69968539 -50315773 + (TCCA)n Simple_repeat Simple_repeat 1 60 0 7 1118 186 103 0 0 chr13 69968614 69968643 -50315669 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 7 1118 611 121 105 49 chr13 69969792 69970081 -50314231 - IAPLTR2_Mm LTR ERVK -383 506 222 7 1118 1626 114 38 4 chr13 69970108 69970371 -50313941 - IAPLTR2_Mm LTR ERVK -203 272 1 7 1118 369 298 106 0 chr13 69970381 69970522 -50313790 - MIR SINE MIR -64 198 43 7 1118 825 308 130 53 chr13 69970676 69971170 -50313142 + MT2A LTR ERVL 2 533 0 7 1118 842 250 70 97 chr13 69973668 69973925 -50310387 - B4 SINE B4 0 292 43 7 1118 1912 275 102 45 chr13 69974204 69974299 -50310013 - Lx8 LINE L1 -30 7443 7355 7 1118 716 86 0 9 chr13 69974299 69974405 -50309907 + (TCCC)n Simple_repeat Simple_repeat 4 108 0 7 1118 1912 275 102 45 chr13 69974405 69974874 -50309438 - Lx8 LINE L1 -119 7354 6865 7 1118 351 136 0 0 chr13 69974874 69974933 -50309379 + (CTA)n Simple_repeat Simple_repeat 3 61 0 7 1118 1912 275 102 45 chr13 69974933 69975140 -50309172 - Lx8 LINE L1 -609 6864 6628 7 1118 2181 64 0 21 chr13 69975140 69975429 -50308883 + MTB_Mm LTR MaLR 1 283 -124 7 1118 1442 296 28 25 chr13 69975456 69975890 -50308422 - Lx8 LINE L1 -848 6625 6191 7 1118 241 222 91 80 chr13 69975890 69975978 -50308334 - MTEa LTR MaLR -51 328 240 7 1118 570 209 57 0 chr13 69976023 69976128 -50308184 - MTEa LTR MaLR -107 272 162 7 1118 398 158 42 0 chr13 69976143 69976238 -50308074 - Lx5 LINE L1 -1 7049 6951 7 1118 21 0 0 0 chr13 69976254 69976275 -50308037 + AT_rich Low_complexity Low_complexity 1 21 0 7 1118 3509 25 2 0 chr13 69976481 69976876 -50307436 - MTA_Mm LTR MaLR 0 396 1 7 1118 28 71 0 0 chr13 69977612 69977668 -50306644 + AT_rich Low_complexity Low_complexity 1 56 0 7 1118 8322 204 57 30 chr13 69978172 69981051 -50303261 + Lx7 LINE L1 4727 7696 0 7 1118 263 303 13 0 chr13 69981115 69981191 -50303121 + ID2 SINE ID 2 78 -5 7 1118 322 284 49 174 chr13 69981695 69982045 -50302267 - MLT1D LTR MaLR -5 500 195 7 1118 2092 246 43 6 chr13 69982650 69983136 -50301176 - Lx6 LINE L1 -12 7448 6945 7 1118 441 121 0 0 chr13 69983159 69983242 -50301070 + (TG)n Simple_repeat Simple_repeat 1 83 0 7 1118 240 296 175 24 chr13 69984771 69984937 -50299375 + Helitron1Na_Mam RC Helitron 749 939 -123 7 1118 1031 265 106 20 chr13 69985395 69985756 -50298556 - MTD LTR MaLR -14 405 7 7 1118 395 258 64 11 chr13 69985798 69985892 -50298420 + MTEb LTR MaLR 264 362 -17 7 1118 295 312 7 86 chr13 69985998 69986149 -50298163 + MLT1H2 LTR MaLR 336 474 -15 7 1118 369 0 0 0 chr13 69986668 69986709 -50297603 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1118 497 327 147 15 chr13 69989059 69989353 -50294959 - LTR40c LTR ERVL 0 465 158 7 1118 275 312 64 0 chr13 69989353 69989462 -50294850 - MER20 DNA MER1_type -2 217 102 7 1118 1206 256 105 22 chr13 69990192 69990573 -50293739 + MTE2b LTR MaLR 1 405 -14 7 1119 3301 59 0 7 chr13 69993355 69993765 -50290547 + MTB_Mm LTR MaLR 1 407 0 7 1119 1553 236 86 93 chr13 69995338 69996044 -50288268 + L1_Mus2 LINE L1 5865 6565 -1 7 1119 4924 85 17 40 chr13 69997069 69997838 -50286474 + RMER17A LTR ERVK 1 751 0 7 1119 360 231 0 0 chr13 69997984 69998049 -50286263 - RMER15 LTR ERVL 0 575 511 7 1119 336 255 166 40 chr13 69998108 69998259 -50286053 - RMER21B LTR ERV1 -275 567 398 7 1119 384 171 14 0 chr13 69998444 69998514 -50285798 - RMER15 LTR ERVL -62 513 443 7 1119 506 234 36 21 chr13 69998844 69998984 -50285328 + RLTR23 LTR ERV1 289 430 0 7 1119 2411 200 27 7 chr13 69998985 69999429 -50284883 - RMER15 LTR ERVL -122 453 1 7 1119 233 354 10 10 chr13 69999713 69999813 -50284499 + Charlie26a DNA MER1_type 72 171 -154 7 1119 562 180 16 8 chr13 69999871 70000000 -50284312 + GA-rich Low_complexity Low_complexity 4 133 0 7 1119 305 164 30 0 chr13 70000001 70000068 -50284244 + GA-rich Low_complexity Low_complexity 1 69 0 1 1119 453 217 0 0 chr13 70000068 70000151 -50284161 - RMER1B Other Other -288 778 696 2 1119 323 301 71 45 chr13 70000501 70000742 -50283570 + MLT1A LTR MaLR 141 373 -17 3 1119 374 347 82 10 chr13 70002561 70002756 -50281556 - MLT1A LTR MaLR -19 355 147 4 1119 180 125 0 0 chr13 70002918 70002950 -50281362 + (CTTG)n Simple_repeat Simple_repeat 3 34 0 5 1119 229 308 90 30 chr13 70003135 70003269 -50281043 - MLT1A LTR MaLR -223 142 1 4 1119 750 11 0 0 chr13 70003404 70003491 -50280821 + (GA)n Simple_repeat Simple_repeat 1 87 0 6 1119 557 236 0 6 chr13 70004749 70004924 -50279388 + CT-rich Low_complexity Low_complexity 3 176 0 7 1119 465 232 16 28 chr13 70005827 70006009 -50278303 + CT-rich Low_complexity Low_complexity 1 180 0 8 1119 261 269 90 42 chr13 70007603 70007767 -50276545 - MLT1C LTR MaLR -162 228 60 9 1119 2258 177 85 16 chr13 70008416 70008450 -50275862 - RLTR11A2 LTR ERVK 0 527 499 1 1119 3761 18 121 0 chr13 70008450 70008890 -50275422 + MT2_Mm LTR ERVL 1 493 0 1 1119 2258 177 85 16 chr13 70008890 70009348 -50274964 - RLTR11A2 LTR ERVK -29 498 1 1 1119 573 330 34 46 chr13 70009460 70009698 -50274614 - Lx8 LINE L1 -80 7393 7159 1 1119 755 217 100 3 chr13 70009698 70009964 -50274348 + MTD LTR MaLR 91 419 0 1 1119 1116 202 9 39 chr13 70010234 70010466 -50273846 - URR1B DNA MER1_type 0 225 1 1 1119 348 351 0 7 chr13 70011074 70011223 -50273089 + (CACCAT)n Simple_repeat Simple_repeat 5 152 0 1 1119 341 275 6 0 chr13 70011251 70011418 -50272894 + (CAT)n Simple_repeat Simple_repeat 3 170 0 1 1119 12850 154 28 183 chr13 70013049 70014689 -50269623 + L1_Mur2 LINE L1 2619 4281 -1596 1 1119 2920 46 13 16 chr13 70014689 70015067 -50269245 - L1Md_F2 LINE L1 -1 6581 6205 1 1119 14792 65 1 0 chr13 70015067 70016927 -50267385 + L1Md_F2 LINE L1 3724 5584 -299 1 1119 8244 40 4 3 chr13 70016929 70017924 -50266388 + L1Md_F2 LINE L1 5587 6582 0 1 1119 7274 73 1 1 chr13 70017929 70018857 -50265455 + L1Md_F2 LINE L1 4657 5584 -299 2 1119 8009 49 18 0 chr13 70018859 70019825 -50264487 + L1Md_F2 LINE L1 5587 6569 -13 2 1119 223 295 14 13 chr13 70020591 70020678 -50263634 + B4 SINE B4 9 97 -68 2 1119 38585 26 8 8 chr13 70020722 70027310 -50257002 + L1Md_A LINE L1 1 5585 -298 2 1119 9191 3 0 0 chr13 70027311 70028307 -50256005 + L1Md_A LINE L1 5587 6582 0 2 1119 1188 24 0 0 chr13 70028307 70028442 -50255870 + L1_Mm LINE L1 5452 5615 -718 2 1119 8945 17 0 0 chr13 70028442 70029437 -50254875 + L1Md_A LINE L1 5587 6581 -1 2 1119 577 269 6 6 chr13 70029437 70029466 -50254846 + L1_Mm LINE L1 5616 5645 -688 2 1119 851 270 136 59 chr13 70029651 70030025 -50254287 + MTD LTR MaLR 1 403 -16 2 1119 1042 267 105 16 chr13 70030660 70030983 -50253329 + MTD LTR MaLR 68 419 0 2 1119 295 269 35 53 chr13 70031507 70031621 -50252691 + MLT1A0 LTR MaLR 30 141 -224 2 1119 2867 61 0 0 chr13 70031852 70032198 -50252114 - ORR1A0 LTR MaLR 0 346 1 2 1119 12028 81 59 5 chr13 70032198 70033897 -50250415 - ORR1A0-int LTR MaLR 0 1792 1 2 1119 2841 67 0 0 chr13 70033897 70034243 -50250069 - ORR1A0 LTR MaLR 0 346 1 2 1119 381 156 0 0 chr13 70035969 70036046 -50248266 + CT-rich Low_complexity Low_complexity 1 77 0 2 1119 279 133 0 0 chr13 70036723 70036768 -50247544 + (CATG)n Simple_repeat Simple_repeat 2 46 0 3 1119 652 264 136 101 chr13 70036838 70037353 -50246959 - MT2B2 LTR ERVL 0 584 1 3 1119 400 346 107 5 chr13 70037357 70037563 -50246749 - B4 SINE B4 -64 228 2 3 1119 526 315 111 21 chr13 70037715 70038137 -50246175 + Zaphod DNA Tip100 1019 1478 -2553 3 1119 423 328 99 76 chr13 70038201 70038921 -50245391 + Zaphod DNA Tip100 1593 2328 -1703 3 1119 222 62 0 0 chr13 70039038 70039070 -50245242 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1119 345 270 45 39 chr13 70039149 70039303 -50245009 + L1MA9 LINE L1 6153 6307 -5 3 1119 396 299 166 12 chr13 70039441 70039688 -50244624 + Zaphod DNA Tip100 2594 2878 -1153 3 1119 24 32 0 0 chr13 70039967 70039998 -50244314 + AT_rich Low_complexity Low_complexity 1 31 0 3 1119 469 302 87 7 chr13 70040526 70040676 -50243636 - RSINE1 SINE B4 -2 163 2 3 1119 254 208 55 14 chr13 70040718 70040791 -50243521 - L1MCa LINE L1 -3368 2953 2878 3 1119 238 264 11 54 chr13 70040786 70040878 -50243434 - L1MCa LINE L1 -4694 1814 1727 3 1119 1414 238 32 3 chr13 70041674 70041986 -50242326 + Lx8 LINE L1 6812 7132 -341 3 1119 222 159 0 64 chr13 70042640 70042687 -50241625 - ID4_ SINE ID -4 79 36 4 1119 327 146 0 0 chr13 70044167 70044222 -50240090 + (TCC)n Simple_repeat Simple_repeat 1 55 0 4 1119 471 204 62 0 chr13 70044226 70044339 -50239973 - B1_Mur2 SINE Alu -20 129 10 4 1119 225 0 0 0 chr13 70045196 70045221 -50239091 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1119 2992 170 39 45 chr13 70045242 70045888 -50238424 - RLTR26 LTR ERVK 0 642 1 4 1119 453 115 0 0 chr13 70047006 70047084 -50237228 + (TG)n Simple_repeat Simple_repeat 1 78 0 4 1119 468 192 0 0 chr13 70047970 70048074 -50236238 + (TCCA)n Simple_repeat Simple_repeat 4 107 0 4 1119 1185 106 0 0 chr13 70048089 70048269 -50236043 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 4 1119 1002 137 0 0 chr13 70048285 70048497 -50235815 + (TCCA)n Simple_repeat Simple_repeat 1 212 0 4 1119 294 223 90 53 chr13 70049300 70049423 -50234889 - MLT1A1 LTR MaLR -2 406 231 4 1119 931 315 11 18 chr13 70050117 70050395 -50233917 - B4 SINE B4 -1 291 16 4 1119 741 326 76 18 chr13 70051002 70051449 -50232863 + L1MB3 LINE L1 5683 6155 -28 4 1119 239 62 14 86 chr13 70052346 70052416 -50231896 + A-rich Low_complexity Low_complexity 2 66 0 5 1119 363 321 42 18 chr13 70053171 70053336 -50230976 - MLT1I LTR MaLR -199 212 44 5 1119 2488 26 9 25 chr13 70055182 70055499 -50228813 - L1Md_F3 LINE L1 -14 6570 6259 5 1119 289 236 33 11 chr13 70056031 70056121 -50228191 - LTR37A LTR ERV1 -46 380 289 5 1119 462 344 0 0 chr13 70056162 70056316 -50227996 - RSINE1 SINE B4 -1 164 11 5 1119 314 267 0 0 chr13 70056610 70056685 -50227627 + (TG)n Simple_repeat Simple_repeat 2 76 0 5 1119 1439 198 118 21 chr13 70056999 70057371 -50226941 + MTD LTR MaLR 12 419 0 5 1119 215 218 91 48 chr13 70057374 70057472 -50226840 + MIR SINE MIR 110 208 -60 5 1119 225 0 0 0 chr13 70057654 70057679 -50226633 + (CA)n Simple_repeat Simple_repeat 2 26 0 5 1119 180 206 0 0 chr13 70059477 70059511 -50224801 + L3 LINE CR1 1616 1649 -2840 5 1119 638 319 151 23 chr13 70060242 70060720 -50223592 - MER68 LTR ERVL -24 539 1 6 1119 222 191 0 0 chr13 70060803 70060850 -50223462 + (CACCAT)n Simple_repeat Simple_repeat 4 50 0 6 1119 600 27 0 0 chr13 70060851 70060925 -50223387 + (TAG)n Simple_repeat Simple_repeat 1 74 0 6 1119 321 330 10 10 chr13 70061433 70061534 -50222778 + LTR90A LTR LTR 852 952 -24 6 1119 234 0 0 0 chr13 70061629 70061655 -50222657 + (TGG)n Simple_repeat Simple_repeat 1 26 0 6 1119 1687 242 35 8 chr13 70061839 70062238 -50222074 - MTD LTR MaLR -5 414 5 6 1119 293 371 48 0 chr13 70062221 70062407 -50221905 + MLT1B LTR MaLR 179 373 -17 6 1119 411 368 31 29 chr13 70062686 70063036 -50221276 + MTE2b LTR MaLR 18 375 -4 6 1119 287 298 39 39 chr13 70063329 70063458 -50220854 + MLT1A1 LTR MaLR 268 396 -12 6 1119 243 61 0 0 chr13 70063475 70063508 -50220804 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 6 1119 383 335 38 6 chr13 70063814 70063997 -50220315 + MER5A DNA MER1_type 1 189 0 7 1119 229 317 0 0 chr13 70064019 70064079 -50220233 + CT-rich Low_complexity Low_complexity 2 61 0 7 1119 317 245 37 9 chr13 70064155 70064262 -50220050 + (TATG)n Simple_repeat Simple_repeat 1 110 0 7 1119 2334 93 12 0 chr13 70064399 70064722 -50219590 + ORR1A2 LTR MaLR 1 327 0 7 1119 716 264 0 79 chr13 70065015 70065152 -50219160 + RSINE1 SINE B4 3 137 -28 7 1119 3265 62 2 7 chr13 70065152 70065561 -50218751 + MTB_Mm LTR MaLR 1 407 0 7 1119 716 264 0 79 chr13 70065561 70065600 -50218712 + RSINE1 SINE B4 138 165 0 7 1119 1092 96 7 0 chr13 70066134 70066280 -50218032 + B1_Mus2 SINE Alu 1 147 0 7 1119 1189 41 14 0 chr13 70069408 70069553 -50214759 + B1_Mus2 SINE Alu 1 147 0 7 1119 234 91 0 0 chr13 70069553 70069586 -50214726 + (A)n Simple_repeat Simple_repeat 1 33 0 7 1119 670 12 0 0 chr13 70069868 70069950 -50214362 + BC1_Mm scRNA scRNA 3 84 -68 7 1119 5093 147 17 55 chr13 70070955 70071939 -50212373 - RMER21A LTR ERV1 0 947 1 8 1119 220 358 0 0 chr13 70072891 70072958 -50211354 - ID4 SINE ID -14 69 3 8 1119 387 141 0 0 chr13 70073316 70073380 -50210932 + (TA)n Simple_repeat Simple_repeat 1 64 0 8 1119 227 146 24 0 chr13 70073987 70074028 -50210284 + L1MC1 LINE L1 1194 1235 -4901 8 1119 1910 285 123 36 chr13 70074250 70075251 -50209061 + L1MC1 LINE L1 5241 6320 -13 8 1119 191 326 35 0 chr13 70075775 70075861 -50208451 - MIRb SINE MIR -74 194 106 8 1119 2062 133 80 22 chr13 70076264 70076625 -50207687 - ORR1C2 LTR MaLR -2 382 1 8 1119 1872 210 41 17 chr13 70077492 70077903 -50206409 - MTC LTR MaLR 0 421 1 8 1119 315 0 0 0 chr13 70078157 70078192 -50206120 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1119 247 136 34 0 chr13 70078193 70078252 -50206060 + (TA)n Simple_repeat Simple_repeat 1 61 0 8 1119 269 197 0 16 chr13 70079455 70079517 -50204795 + (TG)n Simple_repeat Simple_repeat 2 62 0 8 1119 285 146 0 0 chr13 70079872 70079920 -50204392 + (GGA)n Simple_repeat Simple_repeat 2 49 0 9 1119 2549 170 2 5 chr13 70080405 70080825 -50203487 + MTC LTR MaLR 3 421 0 9 1119 1835 229 12 24 chr13 70081695 70082112 -50202200 + MTD LTR MaLR 6 417 -2 9 1119 776 261 63 60 chr13 70084637 70084922 -50199390 - B4A SINE B4 -2 290 5 9 1119 1176 214 91 97 chr13 70086259 70086732 -50197580 - MT2B LTR ERVL -2 599 1 9 1119 381 43 0 0 chr13 70087063 70087110 -50197202 + (GGGAGA)n Simple_repeat Simple_repeat 3 49 0 9 1119 1512 232 150 55 chr13 70087112 70087235 -50197077 - RLTR40 LTR ERVK -84 733 609 9 1119 546 16 0 0 chr13 70087235 70087298 -50197014 + (TG)n Simple_repeat Simple_repeat 1 63 0 9 1119 1512 232 150 55 chr13 70087298 70087586 -50196726 - RLTR40 LTR ERVK -209 608 275 9 1119 204 40 0 0 chr13 70087586 70087611 -50196701 + (CA)n Simple_repeat Simple_repeat 2 26 0 9 1119 1512 232 150 55 chr13 70087611 70087851 -50196461 - RLTR40 LTR ERVK -543 274 20 9 1119 239 341 15 30 chr13 70088012 70088145 -50196167 - MT2A LTR ERVL -134 399 269 9 1119 292 246 104 43 chr13 70088267 70088382 -50195930 - MTEa LTR MaLR -255 124 3 1 1119 1388 292 52 35 chr13 70088614 70089097 -50195215 + Lx8 LINE L1 6210 6700 -773 1 1119 613 239 77 57 chr13 70089192 70089401 -50194911 + Lx8 LINE L1 7250 7462 -11 1 1119 617 212 0 35 chr13 70089492 70089634 -50194678 + URR1B DNA MER1_type 89 225 0 1 1119 188 408 28 17 chr13 70090669 70090846 -50193466 - MIRb SINE MIR -42 226 48 1 1119 181 246 46 0 chr13 70091507 70091572 -50192740 + L2 LINE L2 1699 1766 -1653 1 1119 4511 78 30 2 chr13 70092515 70093108 -50191204 + L1_Mus3 LINE L1 6026 6635 -3 1 1119 4255 107 38 82 chr13 70093315 70094139 -50190173 - RLTR13B4 LTR ERVK -16 787 1 1 1119 573 316 38 51 chr13 70094301 70094614 -50189698 - MT2A LTR ERVL -120 413 105 1 1119 886 306 47 18 chr13 70095687 70095963 -50188349 + B4 SINE B4 7 290 -2 1 1119 337 283 42 58 chr13 70096129 70096249 -50188063 - RSINE1 SINE B4 -16 149 32 1 1119 347 328 17 0 chr13 70096321 70096437 -50187875 - B4A SINE B4 -92 200 83 1 1119 1797 321 58 35 chr13 70096478 70097333 -50186979 - Lx8 LINE L1 -6 7467 6593 1 1119 996 305 41 14 chr13 70097367 70097736 -50186576 + Lx8 LINE L1 6205 6583 -890 1 1119 2187 104 28 3 chr13 70097887 70098204 -50186108 + ORR1A2 LTR MaLR 3 327 0 1 1119 196 213 21 0 chr13 70098882 70098929 -50185383 + MIR SINE MIR 89 136 -126 1 1119 474 320 99 33 chr13 70099233 70099672 -50184640 - Lx9 LINE L1 0 7473 6989 1 1119 21 0 0 0 chr13 70100929 70100950 -50183362 + AT_rich Low_complexity Low_complexity 1 21 0 1 1119 262 287 78 20 chr13 70102333 70102486 -50181826 - MTD LTR MaLR -12 367 206 1 1119 549 44 0 0 chr13 70103606 70103674 -50180638 + (CA)n Simple_repeat Simple_repeat 1 68 0 1 1119 319 351 77 46 chr13 70103711 70103971 -50180341 - MER57E1 LTR ERV1 -2 370 103 1 1119 462 261 82 55 chr13 70104336 70104555 -50179757 + MLT1C LTR MaLR 53 277 -190 1 1119 274 231 0 15 chr13 70104759 70104825 -50179487 + GA-rich Low_complexity Low_complexity 2 66 0 1 1119 357 299 70 8 chr13 70104866 70104994 -50179318 - MTD LTR MaLR -223 136 1 1 1119 439 262 192 23 chr13 70104994 70105142 -50179170 - MTD-int LTR MaLR -53 1527 1351 1 1119 279 247 27 0 chr13 70105164 70105237 -50179075 - MTEa LTR MaLR -17 362 288 1 1119 656 342 56 40 chr13 70105847 70106243 -50178069 - MTD-int LTR MaLR -1147 433 32 1 1119 230 253 13 51 chr13 70106298 70106377 -50177935 - MTD LTR MaLR -14 365 290 1 1119 861 212 64 5 chr13 70106422 70106626 -50177686 - MTD LTR MaLR -181 238 23 1 1119 524 349 62 8 chr13 70106627 70106870 -50177442 - ORR1E LTR MaLR -103 256 1 1 1119 309 355 36 0 chr13 70106893 70107031 -50177281 + MLT1C LTR MaLR 322 464 -3 1 1119 779 294 22 84 chr13 70111005 70111382 -50172930 - MLT1B LTR MaLR -34 356 3 1 1119 333 0 0 0 chr13 70111620 70111657 -50172655 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1119 241 234 0 38 chr13 70111671 70111751 -50172561 - Lx7 LINE L1 -15 7681 7605 1 1119 5302 212 40 60 chr13 70111782 70112080 -50172232 + L1_Mur3 LINE L1 4193 4482 -1398 1 1119 1665 34 10 0 chr13 70112080 70112285 -50172027 + L1Md_F2 LINE L1 6374 6580 -2 1 1119 5302 212 40 60 chr13 70112285 70113073 -50171239 + L1_Mur3 LINE L1 4483 5257 -623 1 1119 222 37 0 0 chr13 70113073 70113100 -50171212 + (CCAA)n Simple_repeat Simple_repeat 2 28 0 1 1119 5302 212 40 60 chr13 70113100 70113124 -50171188 + L1_Mur3 LINE L1 5258 5276 -604 1 1119 1265 115 0 10 chr13 70113124 70113317 -50170995 + B2_Mm2 SINE B2 2 192 -3 1 1119 5302 212 40 60 chr13 70113317 70113642 -50170670 + L1_Mur3 LINE L1 5277 5601 -279 1 1119 576 104 48 0 chr13 70114848 70114973 -50169339 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 1 1119 259 331 32 41 chr13 70115818 70115941 -50168371 - MLT-int LTR MaLR -726 1009 888 1 1119 915 323 67 58 chr13 70117069 70117519 -50166793 - MLT-int LTR MaLR -1114 621 168 1 1119 256 336 0 0 chr13 70117550 70117624 -50166688 + MLT1A LTR MaLR 38 110 -255 1 1119 390 289 123 13 chr13 70117664 70117818 -50166494 + MLT1A LTR MaLR 201 371 -3 1 1119 230 268 13 53 chr13 70117818 70117886 -50166426 - MLT1A0 LTR MaLR -269 96 32 1 1119 351 115 0 0 chr13 70119904 70119965 -50164347 + Lx4A LINE L1 6998 7058 0 1 1119 356 336 115 5 chr13 70119986 70120204 -50164108 + L1M5 LINE L1 3738 3979 -2167 1 1119 315 333 0 39 chr13 70120552 70120655 -50163657 - MLT1H LTR MaLR -367 182 84 1 1119 1279 113 0 5 chr13 70120905 70121092 -50163220 - B2_Mm2 SINE B2 -8 187 2 1 1119 2980 67 43 5 chr13 70121631 70122023 -50162289 + MTB_Mm LTR MaLR 1 407 0 1 1120 23 68 0 0 chr13 70124012 70124056 -50160256 + AT_rich Low_complexity Low_complexity 1 44 0 1 1120 222 118 0 0 chr13 70124792 70124826 -50159486 + (TC)n Simple_repeat Simple_repeat 2 35 0 1 1120 232 229 160 67 chr13 70128132 70128207 -50156105 + B1_Mm SINE Alu 44 125 -22 1 1120 740 244 97 55 chr13 70129043 70129424 -50154888 + RMER20B LTR ERVK 130 589 -38 1 1120 260 340 14 14 chr13 70129551 70129697 -50154615 + (CATG)n Simple_repeat Simple_repeat 1 146 0 1 1120 408 307 124 39 chr13 70129778 70130123 -50154189 - MLT1B LTR MaLR 0 467 1 1 1120 751 289 127 4 chr13 70132368 70132622 -50151690 + MTE2b LTR MaLR 108 416 -3 1 1120 3175 298 95 77 chr13 70132624 70134162 -50150150 + MTE2b-int LTR MaLR 15 1580 0 1 1120 1186 276 51 40 chr13 70134165 70134519 -50149793 + MTE2b LTR MaLR 4 361 -18 1 1120 369 325 25 17 chr13 70134717 70134836 -50149476 - HAL1b LINE L1 -504 1505 1386 1 1120 274 265 175 25 chr13 70135021 70135141 -50149171 - B1_Mus1 SINE Alu -8 140 3 1 1120 842 97 0 0 chr13 70135315 70135429 -50148883 - ORR1A2 LTR MaLR 0 326 213 1 1120 1521 123 5 0 chr13 70135851 70136071 -50148241 - ORR1A2 LTR MaLR -106 221 1 1 1120 4304 27 0 0 chr13 70136197 70136679 -50147633 + LTRIS_Mm LTR ERV1 1 482 0 1 1120 501 263 0 62 chr13 70137146 70137191 -50147121 + MT2B LTR ERVL 121 156 -445 1 1120 928 89 0 0 chr13 70137191 70137314 -50146998 + B1_Mus2 SINE Alu 2 124 -23 1 1120 315 0 0 0 chr13 70137314 70137349 -50146963 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 1120 821 129 64 7 chr13 70137349 70137365 -50146947 + B1_Mur2 SINE Alu 129 148 -1 1 1120 966 63 0 0 chr13 70137392 70137518 -50146794 + (TTTC)n Simple_repeat Simple_repeat 1 126 0 1 1120 23 33 0 0 chr13 70137540 70137570 -50146742 + AT_rich Low_complexity Low_complexity 1 30 0 1 1120 456 321 53 57 chr13 70137903 70138131 -50146181 - L1MEd LINE L1 -4926 1193 967 1 1120 1641 134 153 10 chr13 70138726 70139034 -50145278 - RLTR9A LTR ERVK -8 360 9 1 1120 1027 55 0 0 chr13 70139170 70139297 -50145015 + B1_Mus1 SINE Alu 13 139 -9 1 1120 4877 167 134 62 chr13 70139319 70140539 -50143773 + ORR1B1-int LTR MaLR 12 1318 -191 1 1120 682 178 0 0 chr13 70140536 70140654 -50143658 + ORR1B1 LTR MaLR 277 394 0 1 1120 952 224 85 31 chr13 70140657 70140915 -50143397 + MTE2b LTR MaLR 108 379 0 1 1120 2921 79 3 3 chr13 70141060 70141441 -50142871 - MTB_Mm LTR MaLR -8 399 19 1 1120 195 265 56 56 chr13 70141682 70141754 -50142558 + MIR SINE MIR 24 95 -167 1 1120 2336 79 35 3 chr13 70141852 70142168 -50142144 - ORR1A2 LTR MaLR -1 326 1 1 1120 221 276 0 0 chr13 70142322 70142380 -50141932 + (CCCCG)n Simple_repeat Simple_repeat 5 62 0 1 1120 451 295 105 35 chr13 70143599 70143799 -50140513 - MER21B LTR ERV1 -230 633 420 1 1120 423 98 0 0 chr13 70143800 70143861 -50140451 + (CGTG)n Simple_repeat Simple_repeat 1 61 0 1 1120 447 344 0 0 chr13 70144543 70144723 -50139589 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1120 456 276 71 30 chr13 70144771 70144939 -50139373 - B3A SINE B2 -16 182 8 1 1120 1435 6 23 0 chr13 70145123 70145297 -50139015 + (TTTCC)n Simple_repeat Simple_repeat 1 178 0 1 1120 1290 80 0 0 chr13 70145297 70145472 -50138840 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 1 1120 417 177 0 0 chr13 70145473 70145552 -50138760 + CT-rich Low_complexity Low_complexity 2 80 0 1 1120 21 57 0 0 chr13 70145552 70145587 -50138725 + AT_rich Low_complexity Low_complexity 1 35 0 1 1120 641 283 58 11 chr13 70148406 70148595 -50135717 + B4A SINE B4 9 206 -86 1 1120 3086 94 2 12 chr13 70148666 70149077 -50135235 - MTB_Mm LTR MaLR 0 407 1 1 1120 6313 118 39 80 chr13 70149077 70150221 -50134091 - MTB_Mm-int LTR MaLR 0 1098 1 1 1120 2884 85 19 57 chr13 70150221 70150644 -50133668 - MTB_Mm LTR MaLR 0 407 1 1 1120 182 136 23 0 chr13 70150718 70150762 -50133550 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1120 198 0 0 0 chr13 70150813 70150835 -50133477 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 1120 549 0 0 0 chr13 70150835 70150895 -50133417 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1120 240 143 0 0 chr13 70150998 70151054 -50133258 + (A)n Simple_repeat Simple_repeat 1 56 0 1 1120 235 274 80 37 chr13 70152151 70152314 -50131998 + L1M LINE L1 5260 5429 -749 1 1120 2399 200 39 68 chr13 70152444 70153050 -50131262 - RLTR31_Mur LTR ERVK 0 557 1 1 1120 1769 155 131 0 chr13 70153108 70153444 -50130868 + ORR1B1 LTR MaLR 1 380 -14 1 1120 1923 162 37 34 chr13 70155661 70156013 -50128299 - ORR1B1 LTR MaLR -1 393 41 1 1120 433 301 27 18 chr13 70156043 70156263 -50128049 + L1MA4 LINE L1 5258 5479 -818 1 1120 3552 218 63 65 chr13 70156272 70156739 -50127573 + Lx5 LINE L1 6088 6572 -478 1 1120 235 111 0 0 chr13 70156739 70156775 -50127537 + Tigger10 DNA Tigger 1251 1286 -557 1 1120 3552 218 63 65 chr13 70156775 70157117 -50127195 + Lx5 LINE L1 6573 6930 -120 1 1120 811 224 132 15 chr13 70157115 70157319 -50126993 + Lx5 LINE L1 6817 7044 -6 1 1120 1164 285 53 55 chr13 70157337 70157880 -50126432 + L1MA4 LINE L1 5479 6020 -280 1 1120 535 197 145 0 chr13 70158034 70158151 -50126161 + B1_Mm SINE Alu 1 134 -13 1 1120 233 188 23 23 chr13 70158151 70158232 -50126080 + GA-rich Low_complexity Low_complexity 7 88 0 1 1120 729 246 42 45 chr13 70158243 70158418 -50125894 + B3A SINE B2 1 180 -36 1 1120 483 18 0 0 chr13 70158418 70158474 -50125838 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1120 618 286 59 77 chr13 70158474 70158518 -50125794 + B3 SINE B2 181 216 0 1 1120 351 0 0 0 chr13 70158763 70158802 -50125510 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1120 1165 96 11 0 chr13 70158802 70158979 -50125333 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 1120 220 298 31 41 chr13 70159441 70159539 -50124773 + L3b LINE CR1 143 239 -243 1 1120 1192 115 14 52 chr13 70160045 70160233 -50124079 - RMER17C LTR ERVK 0 410 228 1 1120 489 34 0 0 chr13 70160233 70160292 -50124020 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 1120 1192 218 20 45 chr13 70160292 70160446 -50123866 - RMER17C LTR ERVK -599 307 156 1 1120 360 331 0 49 chr13 70160996 70161139 -50123173 - L1MB7 LINE L1 -16 6168 6033 1 1120 267 284 39 87 chr13 70161292 70161396 -50122916 - L1MB7 LINE L1 -179 6000 5902 1 1120 198 0 0 0 chr13 70161534 70161556 -50122756 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1120 8191 58 3 5 chr13 70161716 70163104 -50121208 - L1_Mus1 LINE L1 0 6567 5235 1 1120 23 0 0 0 chr13 70163267 70163290 -50121022 + AT_rich Low_complexity Low_complexity 1 23 0 2 1120 225 0 0 0 chr13 70163387 70163412 -50120900 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1120 543 280 86 23 chr13 70163554 70163850 -50120462 - L1MB7 LINE L1 -706 5472 5160 1 1120 470 241 27 18 chr13 70163953 70164063 -50120249 - MER106B DNA MER1_type -902 157 47 2 1120 711 289 102 20 chr13 70165080 70165387 -50118925 - ORR1D2 LTR MaLR -10 349 1 2 1120 329 206 13 52 chr13 70165387 70165464 -50118848 + B4A SINE B4 4 77 -215 2 1120 4675 99 64 7 chr13 70165795 70166496 -50117816 + Lx LINE L1 5913 6653 -1 2 1120 647 84 0 10 chr13 70166506 70166602 -50117710 + (GAA)n Simple_repeat Simple_repeat 2 96 0 2 1120 302 257 141 18 chr13 70169315 70169485 -50114827 - L1M5 LINE L1 -1489 4657 4467 2 1120 219 236 0 0 chr13 70169740 70169812 -50114500 + CT-rich Low_complexity Low_complexity 2 73 0 2 1120 221 256 85 49 chr13 70169847 70169929 -50114383 - B1_Mur3 SINE Alu -62 87 3 2 1120 242 254 56 0 chr13 70169859 70169930 -50114382 - ID_B1 SINE B4 -67 157 83 2 1120 28 0 0 0 chr13 70170546 70170574 -50113738 + AT_rich Low_complexity Low_complexity 1 28 0 2 1120 2439 64 38 0 chr13 70170590 70170904 -50113408 + ORR1A2 LTR MaLR 1 326 -1 2 1120 317 77 58 0 chr13 70170984 70171036 -50113276 + B1_Mus1 SINE Alu 1 55 -93 2 1120 249 257 43 0 chr13 70171036 70171054 -50113258 + ID_B1 SINE B4 82 154 -70 2 1120 270 222 0 0 chr13 70171058 70171148 -50113164 + GA-rich Low_complexity Low_complexity 2 91 0 2 1120 726 161 0 0 chr13 70171138 70171312 -50113000 + (CAGG)n Simple_repeat Simple_repeat 2 175 0 2 1120 729 65 9 0 chr13 70171351 70171458 -50112854 + B1_Mus2 SINE Alu 40 147 0 2 1120 306 0 0 0 chr13 70171467 70171501 -50112811 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 1120 423 274 157 5 chr13 70172991 70173189 -50111123 + MLT1A1 LTR MaLR 1 228 -180 2 1120 340 184 11 22 chr13 70173310 70173399 -50110913 + CT-rich Low_complexity Low_complexity 3 90 0 2 1120 1559 238 28 26 chr13 70173405 70173794 -50110518 - Lx9 LINE L1 -506 7138 6749 2 1120 266 293 50 20 chr13 70173962 70174063 -50110249 + LTR50 LTR ERVL 82 185 -610 2 1120 685 223 15 0 chr13 70174361 70174491 -50109821 + B1_Mus2 SINE Alu 5 136 -11 2 1120 926 144 11 0 chr13 70174493 70174667 -50109645 + GA-rich Low_complexity Low_complexity 1 176 0 2 1120 390 21 0 0 chr13 70176402 70176449 -50107863 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1120 351 0 0 0 chr13 70176555 70176594 -50107718 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1120 257 212 57 36 chr13 70176683 70176798 -50107514 + MIR SINE MIR 15 130 -78 2 1120 2841 204 54 7 chr13 70177549 70178106 -50106206 + Lx7 LINE L1 6267 6849 -847 2 1120 382 280 100 17 chr13 70178898 70179018 -50105294 + B1F SINE Alu 3 132 -17 2 1120 423 153 34 34 chr13 70179069 70179245 -50105067 + (CACAA)n Simple_repeat Simple_repeat 2 177 0 2 1120 216 133 120 0 chr13 70179247 70179322 -50104990 + (CAA)n Simple_repeat Simple_repeat 3 86 0 2 1120 1281 259 92 13 chr13 70179424 70179842 -50104470 - RMER19C LTR ERVK -34 577 115 2 1120 27 0 0 0 chr13 70179899 70179926 -50104386 + AT_rich Low_complexity Low_complexity 1 27 0 2 1120 3170 76 2 12 chr13 70181181 70181592 -50102720 + MTB_Mm LTR MaLR 1 407 0 2 1120 546 16 0 0 chr13 70182286 70182349 -50101963 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 1120 1622 251 107 32 chr13 70184348 70184883 -50099429 + RMER15 LTR ERVL 1 575 0 2 1120 452 274 112 70 chr13 70185206 70185423 -50098889 + Lx7 LINE L1 6967 7175 -521 2 1120 453 19 0 0 chr13 70185423 70185477 -50098835 + (CAAT)n Simple_repeat Simple_repeat 2 55 0 2 1120 452 274 112 70 chr13 70185477 70185589 -50098723 + Lx7 LINE L1 7176 7309 -387 2 1120 217 240 13 13 chr13 70185603 70185679 -50098633 + GA-rich Low_complexity Low_complexity 1 76 0 2 1120 1122 197 5 9 chr13 70186181 70186401 -50097911 - URR1B DNA MER1_type -6 219 1 2 1120 225 370 6 13 chr13 70188225 70188384 -50095928 + (TG)n Simple_repeat Simple_repeat 1 158 0 2 1120 1806 153 60 9 chr13 70188471 70188820 -50095492 - ORR1B2 LTR MaLR 0 367 1 2 1120 627 14 0 0 chr13 70188848 70188920 -50095392 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1120 454 292 25 19 chr13 70190038 70190195 -50094117 - Lx8 LINE L1 -1144 6329 6172 2 1120 563 197 11 33 chr13 70190196 70190380 -50093932 + (TATG)n Simple_repeat Simple_repeat 1 180 0 2 1120 393 293 91 103 chr13 70190416 70190755 -50093557 - Lx8 LINE L1 -1316 6157 5823 2 1120 352 264 27 36 chr13 70190761 70190871 -50093441 - Lx9 LINE L1 -1751 5893 5785 2 1120 960 144 209 23 chr13 70190897 70191074 -50093238 - B3 SINE B2 -4 212 3 2 1120 608 328 61 20 chr13 70191171 70191464 -50092848 + Lx8 LINE L1 7048 7352 -121 2 1120 2368 156 7 39 chr13 70192392 70192799 -50091513 - ORR1B1 LTR MaLR 0 394 1 2 1120 944 127 13 0 chr13 70192799 70192957 -50091355 - ORR1B1-int LTR MaLR 0 1509 1350 2 1120 1291 98 17 0 chr13 70192988 70193161 -50091151 + B2_Mm2 SINE B2 2 177 -18 2 1120 298 277 0 46 chr13 70193188 70193275 -50091037 - RMER19C LTR ERVK -8 603 521 2 1120 1687 240 19 46 chr13 70193296 70193776 -50090536 - RMER19C LTR ERVK -19 592 126 2 1120 481 306 23 17 chr13 70193967 70194143 -50090169 + MER90a LTR ERV1 344 520 -94 2 1120 632 324 80 15 chr13 70194191 70194517 -50089795 - MLT1A0 LTR MaLR 0 365 19 2 1120 757 272 39 5 chr13 70194687 70194890 -50089422 - Lx8 LINE L1 -156 7317 7108 2 1120 194 412 0 0 chr13 70195427 70195529 -50088783 - MIR SINE MIR -149 113 12 2 1120 341 310 26 103 chr13 70196116 70196310 -50088002 + B3A SINE B2 4 182 -16 2 1120 198 264 19 0 chr13 70198870 70198923 -50085389 - MIRm SINE MIR -167 109 56 2 1120 1014 54 0 0 chr13 70199016 70199145 -50085167 + (GGAA)n Simple_repeat Simple_repeat 3 131 0 2 1120 195 129 0 0 chr13 70200014 70200045 -50084267 + (TATATG)n Simple_repeat Simple_repeat 3 33 0 2 1120 4515 38 2 7 chr13 70201271 70201808 -50082504 + L1Md_F2 LINE L1 6037 6570 -12 2 1120 204 40 0 0 chr13 70202610 70202635 -50081677 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 2 1120 1262 114 95 0 chr13 70203063 70203274 -50081038 - Lx2 LINE L1 -1 6996 6766 2 1120 467 350 57 4 chr13 70203683 70203930 -50080382 + MLT1A0 LTR MaLR 106 365 0 2 1120 802 324 11 72 chr13 70204548 70204961 -50079351 - MTE2a LTR MaLR -14 405 6 2 1120 2361 106 19 0 chr13 70205088 70205409 -50078903 - ORR1A2 LTR MaLR 0 327 1 2 1120 297 0 0 0 chr13 70206349 70206382 -50077930 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1120 383 165 0 9 chr13 70206382 70206492 -50077820 + GA-rich Low_complexity Low_complexity 2 110 0 2 1120 1909 0 0 0 chr13 70206517 70206728 -50077584 - L1Md_A LINE L1 -1 6581 6371 2 1120 1535 109 0 4 chr13 70206860 70207100 -50077212 + Lx LINE L1 6416 6654 0 2 1120 266 284 18 35 chr13 70207980 70208093 -50076219 - L1ME1 LINE L1 -217 5962 5852 2 1120 225 373 42 8 chr13 70208278 70208397 -50075915 + B4A SINE B4 3 125 -167 2 1120 23 0 0 0 chr13 70208502 70208525 -50075787 + AT_rich Low_complexity Low_complexity 1 23 0 2 1120 2388 63 34 34 chr13 70208525 70208853 -50075459 - L1_Mus1 LINE L1 0 6567 6240 2 1120 2611 77 0 0 chr13 70208853 70209180 -50075132 + L1_Mus1 LINE L1 5893 6219 -348 2 1120 1394 205 80 23 chr13 70209239 70209272 -50075040 - ORR1D1 LTR MaLR -4 370 335 2 1120 2865 96 46 0 chr13 70209272 70209666 -50074646 + Lx3C LINE L1 6561 6972 -4 2 1120 1394 205 80 23 chr13 70209666 70209982 -50074330 - ORR1D1 LTR MaLR -40 334 1 2 1120 214 247 82 0 chr13 70209994 70210079 -50074233 + (CATATA)n Simple_repeat Simple_repeat 3 94 0 2 1120 1155 64 76 0 chr13 70210086 70210257 -50074055 + B2_Mm2 SINE B2 9 192 -3 2 1120 342 309 78 60 chr13 70210352 70210683 -50073629 - L1M5 LINE L1 -1376 4770 4434 2 1120 278 296 82 74 chr13 70210702 70210837 -50073475 - RSINE1 SINE B4 -4 161 26 2 1120 378 0 0 0 chr13 70211605 70211647 -50072665 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1120 398 303 93 19 chr13 70212806 70213119 -50071193 - MER31A LTR ERV1 0 485 150 2 1120 180 0 0 0 chr13 70213848 70213868 -50070444 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2 1120 232 356 91 35 chr13 70214503 70214701 -50069611 - MER58A DNA MER1_type 0 224 16 2 1120 347 277 19 19 chr13 70214726 70214829 -50069483 - MER5A DNA MER1_type -28 161 59 2 1120 504 252 0 0 chr13 70214822 70214941 -50069371 - ID_B1 SINE B4 -7 217 99 2 1120 413 191 0 9 chr13 70215589 70215705 -50068607 + (TA)n Simple_repeat Simple_repeat 1 115 0 2 1120 573 163 15 15 chr13 70215708 70215839 -50068473 + (CAGAGA)n Simple_repeat Simple_repeat 3 133 0 2 1120 242 346 0 0 chr13 70216962 70217040 -50067272 + ID4 SINE ID 6 83 0 2 1120 284 270 33 22 chr13 70217040 70217131 -50067181 + GA-rich Low_complexity Low_complexity 4 95 0 2 1120 201 121 0 0 chr13 70217153 70217186 -50067126 + (GGAA)n Simple_repeat Simple_repeat 3 35 0 2 1120 221 310 8 25 chr13 70217186 70217305 -50067007 + GA-rich Low_complexity Low_complexity 1 117 0 2 1120 201 176 0 0 chr13 70217693 70217727 -50066585 + T-rich Low_complexity Low_complexity 1 34 0 2 1120 534 277 15 8 chr13 70217945 70218076 -50066236 - RSINE1 SINE B4 -22 143 12 2 1120 511 287 36 31 chr13 70218101 70218295 -50066017 + ID_B1 SINE B4 6 200 -24 2 1120 783 192 0 0 chr13 70218593 70218910 -50065402 + (CA)n Simple_repeat Simple_repeat 1 317 0 2 1120 420 234 0 0 chr13 70218948 70219089 -50065223 + (CA)n Simple_repeat Simple_repeat 1 141 0 2 1120 206 192 19 0 chr13 70220440 70220492 -50063820 + CT-rich Low_complexity Low_complexity 4 56 0 2 1120 209 256 23 31 chr13 70221093 70221222 -50063090 + T-rich Low_complexity Low_complexity 5 132 0 2 1120 207 255 0 0 chr13 70221227 70221274 -50063038 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1120 306 247 49 0 chr13 70221288 70221369 -50062943 - B4 SINE B4 -12 280 196 3 1120 298 299 0 0 chr13 70222262 70222329 -50061983 - tRNA-Ala-GCY_ tRNA tRNA -7 68 2 3 1120 1467 100 28 12 chr13 70223136 70223390 -50060922 - L1_Mus4 LINE L1 0 6636 6379 3 1120 495 279 57 0 chr13 70223393 70223576 -50060736 - L1MB5 LINE L1 -246 5933 5727 3 1120 223 291 152 29 chr13 70225495 70225633 -50058679 + L3b LINE CR1 260 414 -68 3 1120 321 287 50 0 chr13 70225765 70225866 -50058446 + ID_B1 SINE B4 35 140 -84 3 1120 266 235 19 75 chr13 70225879 70225985 -50058327 + ID_B1 SINE B4 123 222 -2 3 1120 213 279 12 71 chr13 70225909 70225994 -50058318 + B1_Mur2 SINE Alu 70 149 0 3 1120 369 75 0 0 chr13 70225994 70226047 -50058265 + (CAAAA)n Simple_repeat Simple_repeat 1 53 0 3 1120 216 86 0 0 chr13 70226048 70226083 -50058229 + (CCAA)n Simple_repeat Simple_repeat 1 35 0 3 1120 517 353 37 28 chr13 70227824 70228150 -50056162 + MER58B DNA MER1_type 1 329 -12 3 1120 180 0 0 0 chr13 70228574 70228594 -50055718 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 1120 186 250 0 145 chr13 70228690 70228807 -50055505 + L2c LINE L2 3268 3367 -20 3 1120 3850 146 58 10 chr13 70229056 70229746 -50054566 + RMER19A LTR ERVK 3 725 -12 3 1120 250 260 98 68 chr13 70230269 70230401 -50053911 - B4 SINE B4 -155 137 2 3 1120 712 273 158 8 chr13 70231232 70231605 -50052707 - MLT1C LTR MaLR -2 465 37 3 1120 909 266 44 16 chr13 70231769 70232021 -50052291 - ORR1E LTR MaLR -54 305 47 3 1120 483 18 0 0 chr13 70232701 70232757 -50051555 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1120 378 0 0 0 chr13 70232844 70232886 -50051426 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1120 498 217 0 0 chr13 70233595 70233756 -50050556 + (TG)n Simple_repeat Simple_repeat 2 162 0 3 1120 441 235 0 0 chr13 70233823 70234002 -50050310 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1120 837 156 0 0 chr13 70234030 70234197 -50050115 + (TG)n Simple_repeat Simple_repeat 1 167 0 3 1120 436 280 53 13 chr13 70234412 70234564 -50049748 - Lx6 LINE L1 -24 7436 7279 3 1120 484 222 42 17 chr13 70236341 70236460 -50047852 - ORR1D2 LTR MaLR -244 126 5 3 1120 2086 50 4 0 chr13 70236869 70237128 -50047184 - L1Md_F2 LINE L1 -512 6070 5811 3 1120 3754 72 4 18 chr13 70237128 70237635 -50046677 + L1Md_F2 LINE L1 6079 6578 -4 3 1120 510 46 0 0 chr13 70237824 70237889 -50046423 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1120 1436 79 5 0 chr13 70238069 70238259 -50046053 - B2_Mm2 SINE B2 -3 192 2 3 1120 6589 76 38 34 chr13 70238344 70239321 -50044991 - Lx3_Mus LINE L1 -8 7001 6021 3 1120 297 322 99 53 chr13 70240661 70240863 -50043449 - L1MD LINE L1 -1807 4339 4122 3 1120 1164 206 5 0 chr13 70240863 70241086 -50043226 - URR1B DNA MER1_type 0 225 2 3 1120 297 322 99 53 chr13 70241086 70241277 -50043035 - L1MD LINE L1 -2025 4121 3928 3 1120 713 252 347 36 chr13 70241960 70242205 -50042107 - MTEa LTR MaLR 0 379 60 3 1120 3090 72 16 137 chr13 70242205 70242753 -50041559 - RLTR45 LTR ERVK 0 482 1 3 1120 367 290 0 70 chr13 70242753 70242808 -50041504 - MTEa LTR MaLR -300 59 6 3 1120 489 138 0 0 chr13 70242936 70243016 -50041296 + (TG)n Simple_repeat Simple_repeat 2 81 0 3 1120 446 296 109 55 chr13 70243905 70244252 -50040060 - Lx8 LINE L1 -39 7434 7041 3 1120 429 183 0 0 chr13 70246517 70246621 -50037691 + CT-rich Low_complexity Low_complexity 3 106 0 3 1120 573 206 22 22 chr13 70246655 70246789 -50037523 - Lx5 LINE L1 -12 7038 6905 3 1120 9150 142 55 45 chr13 70246785 70248970 -50035342 - L1VL4 LINE L1 -1196 4681 2490 3 1120 513 0 0 0 chr13 70248970 70249027 -50035285 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1120 6879 224 75 100 chr13 70249027 70249208 -50035104 - L1VL4 LINE L1 -3397 2489 2358 3 1120 1884 127 153 6 chr13 70249208 70249542 -50034770 - RLTR9A2 LTR ERVK 0 383 1 3 1120 6879 224 75 100 chr13 70249542 70249611 -50034701 - L1VL4 LINE L1 -3529 2357 2287 3 1120 1224 101 0 0 chr13 70249611 70249789 -50034523 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 3 1120 6879 215 54 88 chr13 70249789 70251640 -50032672 - L1VL4 LINE L1 -3600 2286 529 3 1120 358 268 26 9 chr13 70251850 70251963 -50032349 + GA-rich Low_complexity Low_complexity 2 116 0 3 1120 361 271 12 0 chr13 70251998 70252083 -50032229 + MTD LTR MaLR 20 105 -314 3 1120 315 212 25 12 chr13 70253500 70253581 -50030731 + B4A SINE B4 16 97 -195 3 1120 1193 55 7 0 chr13 70253581 70253727 -50030585 + B1_Mus1 SINE Alu 2 148 0 3 1120 255 330 27 36 chr13 70253925 70254035 -50030277 + B4A SINE B4 176 284 -8 3 1121 203 105 53 0 chr13 70254866 70254904 -50029408 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 3 1121 395 264 9 28 chr13 70255107 70255216 -50029096 + MTEb LTR MaLR 24 130 -249 3 1121 432 222 86 61 chr13 70255247 70255410 -50028902 + MTEb LTR MaLR 195 361 -18 3 1121 1040 37 0 0 chr13 70255487 70255622 -50028690 + B1_Mm SINE Alu 13 147 0 3 1121 243 0 0 0 chr13 70256307 70256334 -50027978 + (CAG)n Simple_repeat Simple_repeat 1 27 0 3 1121 480 111 0 0 chr13 70256620 70256692 -50027620 + (TG)n Simple_repeat Simple_repeat 2 73 0 3 1121 1038 245 0 0 chr13 70257012 70257220 -50027092 - B3 SINE B2 -7 209 2 3 1121 1101 286 44 27 chr13 70257220 70257587 -50026725 - MTE2b LTR MaLR -5 374 2 3 1121 304 317 48 27 chr13 70259266 70259412 -50024900 + L1MEe LINE L1 140 288 -4566 3 1121 180 322 51 0 chr13 70260874 70260933 -50023379 + MIRb SINE MIR 117 178 -90 3 1121 3261 208 44 101 chr13 70261023 70262051 -50022261 + Lx7 LINE L1 6728 7696 0 3 1121 549 76 0 0 chr13 70262823 70262902 -50021410 + (TG)n Simple_repeat Simple_repeat 2 80 0 3 1121 218 136 23 0 chr13 70264732 70264776 -50019536 + (CAT)n Simple_repeat Simple_repeat 1 45 0 3 1121 183 139 0 0 chr13 70266310 70266346 -50017966 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1121 235 282 24 0 chr13 70266784 70266869 -50017443 - Charlie7 DNA MER1_type -1935 677 591 3 1121 228 274 23 23 chr13 70267293 70267379 -50016933 - L1MEc LINE L1 -494 5843 5758 3 1121 547 237 23 15 chr13 70267394 70267527 -50016785 + RSINE1 SINE B4 8 141 -24 3 1121 2150 76 71 56 chr13 70267527 70267849 -50016463 - ORR1A2 LTR MaLR 0 327 1 3 1121 363 311 66 0 chr13 70267916 70268099 -50016213 - L1MEc LINE L1 -598 5754 5560 3 1121 609 238 115 16 chr13 70268237 70268429 -50015883 + MTD LTR MaLR 1 211 -208 3 1121 878 300 106 88 chr13 70268451 70269095 -50015217 + Lx9 LINE L1 6959 7613 -31 3 1121 823 215 61 10 chr13 70269132 70269329 -50014983 + MTD LTR MaLR 196 402 -17 3 1121 721 312 148 32 chr13 70269823 70270814 -50013498 - L1MEc LINE L1 -1404 4909 3790 3 1121 283 296 92 9 chr13 70270969 70271078 -50013234 - PB1D10 SINE Alu -3 124 7 3 1121 267 297 133 45 chr13 70271252 70271942 -50012370 - L1MEc LINE L1 -2831 3488 2731 3 1121 584 327 38 30 chr13 70271977 70272349 -50011963 - L1MEc LINE L1 -5518 882 508 3 1121 477 236 229 49 chr13 70273742 70273947 -50010365 - MTD LTR MaLR -40 379 138 3 1121 225 190 0 94 chr13 70273942 70274006 -50010306 - B4A SINE B4 -149 143 86 3 1121 4375 52 2 2 chr13 70274562 70275099 -50009213 + L1Md_F2 LINE L1 6045 6581 -1 3 1121 243 0 0 0 chr13 70275332 70275359 -50008953 + (CTG)n Simple_repeat Simple_repeat 2 28 0 3 1121 351 320 45 7 chr13 70276114 70276268 -50008044 + ID_B1 SINE B4 2 161 -63 3 1121 221 317 0 12 chr13 70276878 70276961 -50007351 + (TATG)n Simple_repeat Simple_repeat 2 83 0 3 1121 560 269 170 4 chr13 70276964 70277199 -50007113 - B4A SINE B4 -14 278 5 3 1121 23 0 0 0 chr13 70277214 70277237 -50007075 + AT_rich Low_complexity Low_complexity 1 23 0 3 1121 1064 51 51 0 chr13 70277237 70277375 -50006937 - B1_Mus1 SINE Alu -2 146 2 3 1121 21 0 0 0 chr13 70277385 70277406 -50006906 + AT_rich Low_complexity Low_complexity 1 21 0 3 1121 1015 190 40 140 chr13 70277407 70277786 -50006526 - Lx9 LINE L1 -1 7643 7303 3 1121 894 150 0 0 chr13 70277982 70278135 -50006177 + CT-rich Low_complexity Low_complexity 2 154 0 3 1121 235 317 148 21 chr13 70278256 70278398 -50005914 + MER82 DNA MER2_type 361 520 -133 3 1121 365 260 89 76 chr13 70278629 70278768 -50005544 - Lx9 LINE L1 -8 7636 7506 3 1121 372 88 0 0 chr13 70278768 70278825 -50005487 + (TG)n Simple_repeat Simple_repeat 1 57 0 3 1121 365 260 89 76 chr13 70278825 70278976 -50005336 - Lx9 LINE L1 -139 7505 7342 3 1121 501 297 13 7 chr13 70279234 70279383 -50004929 - RSINE1 SINE B4 0 165 16 3 1121 435 167 0 0 chr13 70279761 70279851 -50004461 + (TA)n Simple_repeat Simple_repeat 2 91 0 3 1121 243 0 0 0 chr13 70279851 70279878 -50004434 + (GA)n Simple_repeat Simple_repeat 2 28 0 3 1121 634 130 10 0 chr13 70280402 70280502 -50003810 - RMER6A LTR ERVK 0 756 656 3 1121 369 202 0 23 chr13 70280492 70280578 -50003734 - RMER6A LTR ERVK -277 443 360 3 1121 289 284 51 63 chr13 70280867 70281025 -50003287 - RLTR14 LTR ERV1 -1 381 226 3 1121 270 0 0 0 chr13 70281243 70281273 -50003039 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1121 291 258 183 6 chr13 70281741 70281848 -50002464 - Lx9 LINE L1 -6 7638 7524 3 1121 357 109 0 0 chr13 70281848 70281903 -50002409 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1121 291 258 183 6 chr13 70281903 70281959 -50002353 - Lx9 LINE L1 -121 7523 7447 3 1121 1282 255 60 39 chr13 70282121 70282228 -50002084 - MTD LTR MaLR -2 417 319 3 1121 3135 140 198 76 chr13 70282228 70282885 -50001427 - RMER19A LTR ERVK 0 737 1 3 1121 1282 255 60 39 chr13 70282885 70283160 -50001152 - MTD LTR MaLR -101 318 27 3 1121 189 0 0 0 chr13 70283996 70284017 -50000295 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 1121 1491 132 231 9 chr13 70285256 70285577 -49998735 - MTC LTR MaLR -26 395 4 3 1121 206 118 0 0 chr13 70286242 70286276 -49998036 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1121 207 0 0 0 chr13 70286499 70286522 -49997790 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1121 667 224 7 13 chr13 70286768 70286917 -49997395 - B1_Mur1 SINE Alu 0 149 2 3 1121 1568 302 78 11 chr13 70286943 70287899 -49996413 - Lx8 LINE L1 -8 7465 6401 3 1121 308 300 63 9 chr13 70289632 70289743 -49994569 - ID_B1 SINE B4 -21 203 87 3 1121 468 284 39 0 chr13 70289960 70290087 -49994225 - MLT1D LTR MaLR -327 178 47 3 1121 406 271 186 0 chr13 70292121 70292261 -49992051 + B3A SINE B2 1 166 -32 3 1121 522 118 0 0 chr13 70292264 70292357 -49991955 + (CA)n Simple_repeat Simple_repeat 2 94 0 3 1121 264 122 0 0 chr13 70292533 70292574 -49991738 + (T)n Simple_repeat Simple_repeat 1 41 0 3 1121 387 0 0 0 chr13 70292726 70292769 -49991543 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 3 1121 279 322 75 66 chr13 70292793 70293157 -49991155 + MLT2C2 LTR ERVL 1 383 -173 4 1121 592 276 54 0 chr13 70293735 70293920 -49990392 + L1MA6 LINE L1 6105 6299 -1 4 1121 33 0 0 0 chr13 70295296 70295329 -49988983 + AT_rich Low_complexity Low_complexity 1 33 0 4 1121 234 0 0 0 chr13 70295759 70295785 -49988527 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1121 306 269 13 0 chr13 70296345 70296423 -49987889 - ID SINE ID -145 79 1 4 1121 915 263 61 28 chr13 70296516 70296852 -49987460 + ORR1E LTR MaLR 11 379 0 4 1121 513 0 0 0 chr13 70297865 70297922 -49986390 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1121 420 214 0 0 chr13 70298996 70299169 -49985143 + (TG)n Simple_repeat Simple_repeat 2 174 0 4 1121 369 0 0 0 chr13 70299186 70299227 -49985085 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 1121 453 250 192 26 chr13 70299228 70299384 -49984928 - B3A SINE B2 -16 182 1 4 1121 511 271 443 20 chr13 70302501 70302754 -49981558 - MTE2b LTR MaLR -19 360 1 4 1121 275 259 115 109 chr13 70303177 70303333 -49980979 - MLT2D LTR ERVL -3 557 401 4 1121 441 160 112 48 chr13 70303779 70303867 -49980445 - URR1B DNA MER1_type 0 225 127 4 1121 2955 74 26 0 chr13 70303867 70304257 -49980055 + MTB LTR MaLR 1 400 0 4 1121 441 160 112 48 chr13 70304257 70304293 -49980019 - URR1B DNA MER1_type -99 126 93 4 1121 458 218 27 18 chr13 70304547 70304659 -49979653 + RSINE1 SINE B4 12 124 -41 4 1121 486 134 18 18 chr13 70305739 70305831 -49978481 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 4 1121 279 0 0 0 chr13 70305831 70305862 -49978450 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1121 414 0 0 0 chr13 70305862 70305907 -49978405 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1121 486 134 18 18 chr13 70305907 70305927 -49978385 + (TAGA)n Simple_repeat Simple_repeat 2 20 0 4 1121 311 291 0 18 chr13 70306096 70306208 -49978104 + CT-rich Low_complexity Low_complexity 1 110 0 4 1121 746 282 57 81 chr13 70306305 70306676 -49977636 - MTEb LTR MaLR -17 362 1 4 1121 3589 211 112 28 chr13 70308166 70309108 -49975204 + RMER1B Other Other 45 1066 0 4 1121 189 0 0 0 chr13 70310340 70310361 -49973951 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1121 1104 36 0 0 chr13 70311230 70311367 -49972945 + (CA)n Simple_repeat Simple_repeat 2 138 0 4 1121 1316 283 19 16 chr13 70312980 70313350 -49970962 + MTEa LTR MaLR 1 371 -8 4 1121 252 333 60 77 chr13 70313371 70313670 -49970642 + MLT1D LTR MaLR 112 405 -100 4 1121 808 261 51 75 chr13 70314794 70315088 -49969224 - B4A SINE B4 0 292 6 4 1121 21 0 0 0 chr13 70315600 70315621 -49968691 + AT_rich Low_complexity Low_complexity 1 21 0 4 1121 305 287 29 38 chr13 70317644 70317749 -49966563 + MTEa LTR MaLR 26 129 -250 4 1121 514 357 44 11 chr13 70317826 70318101 -49966211 + MT2A LTR ERVL 246 529 -4 4 1121 737 274 109 89 chr13 70318882 70319230 -49965082 - ORR1E LTR MaLR -4 355 1 4 1121 357 240 89 10 chr13 70319230 70319323 -49964989 - MTE-int LTR MaLR -52 1528 1428 4 1121 528 16 0 0 chr13 70319422 70319483 -49964829 + (TC)n Simple_repeat Simple_repeat 1 61 0 4 1121 6307 254 57 11 chr13 70319494 70321297 -49963015 + Lx7 LINE L1 5425 7320 -376 4 1121 387 41 0 0 chr13 70321314 70321363 -49962949 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1121 3417 306 86 19 chr13 70321370 70322712 -49961600 - MTE-int LTR MaLR -149 1431 1 4 1121 1121 102 19 0 chr13 70324687 70324844 -49959468 - L1_Mur2 LINE L1 -344 5533 5374 4 1121 5327 133 54 15 chr13 70324845 70325710 -49958602 + Lx4A LINE L1 6159 7057 -1 4 1121 234 91 0 0 chr13 70325718 70325751 -49958561 + (GGGGA)n Simple_repeat Simple_repeat 3 35 0 4 1121 1011 161 0 0 chr13 70325751 70325931 -49958381 + GA-rich Low_complexity Low_complexity 1 180 0 4 1121 315 309 58 76 chr13 70326187 70326358 -49957954 + L1MC5 LINE L1 7178 7340 -621 4 1121 7450 11 4 6 chr13 70326358 70327182 -49957130 - RLTR13B2 LTR ERVK 0 822 1 4 1121 315 309 58 76 chr13 70327182 70327353 -49956959 + L1MC5 LINE L1 7341 7514 -447 4 1121 1797 182 22 3 chr13 70327449 70327763 -49956549 + Lx2B LINE L1 6432 6751 -249 4 1121 393 306 61 39 chr13 70327890 70328070 -49956242 + B3A SINE B2 5 188 -10 4 1121 549 278 12 58 chr13 70329874 70330046 -49954266 - B3 SINE B2 -6 210 47 4 1121 312 188 45 34 chr13 70330265 70330353 -49953959 + Lx9 LINE L1 7515 7603 -41 4 1121 22 0 0 0 chr13 70330353 70330375 -49953937 + AT_rich Low_complexity Low_complexity 1 22 0 4 1121 610 300 98 72 chr13 70330943 70331302 -49953010 - MLT1F2 LTR MaLR -113 447 80 4 1121 207 182 0 0 chr13 70331305 70331349 -49952963 + G-rich Low_complexity Low_complexity 1 44 0 4 1121 459 0 0 0 chr13 70331868 70331919 -49952393 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1121 1078 199 9 19 chr13 70333929 70334144 -49950168 + B3 SINE B2 4 216 0 4 1121 599 0 14 0 chr13 70336697 70336768 -49947544 + (TG)n Simple_repeat Simple_repeat 1 72 0 4 1121 486 0 0 0 chr13 70336768 70336821 -49947491 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 1121 469 308 15 0 chr13 70336935 70337068 -49947244 - B4A SINE B4 -156 136 2 4 1121 224 77 0 25 chr13 70337184 70337224 -49947088 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1121 1909 118 108 82 chr13 70338652 70339115 -49945197 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1121 232 370 59 24 chr13 70339128 70339297 -49945015 + Tigger5 DNA MER2_type 32 206 -2200 4 1121 402 248 39 0 chr13 70339996 70340125 -49944187 - L1M2 LINE L1 -2391 3752 3619 4 1121 672 285 82 27 chr13 70340132 70340441 -49943871 - ORR1D2 LTR MaLR -20 350 2 4 1121 350 246 99 8 chr13 70340444 70340575 -49943737 - L1M2 LINE L1 -2514 3629 3487 4 1121 984 81 0 0 chr13 70340579 70340702 -49943610 - L1_Mus3 LINE L1 -159 6479 6357 4 1121 296 331 30 24 chr13 70340796 70340969 -49943343 - L1_Rod LINE L1 -3369 2478 2296 4 1121 7298 82 44 15 chr13 70341010 70341590 -49942722 - L1_Mus3 LINE L1 0 6638 6022 4 1121 4489 18 0 0 chr13 70341590 70342083 -49942229 - MT2_Mm LTR ERVL 0 493 1 4 1121 7298 82 44 15 chr13 70342083 70342524 -49941788 - L1_Mus3 LINE L1 -617 6021 5587 4 1121 243 279 29 0 chr13 70342555 70342623 -49941689 - L1M2 LINE L1 -3870 2273 2204 4 1121 497 323 75 15 chr13 70342635 70342968 -49941344 + L1M2 LINE L1 4519 4871 -1272 4 1121 325 294 11 11 chr13 70343315 70343408 -49940904 - MTEa LTR MaLR -286 93 1 4 1121 296 282 127 53 chr13 70344932 70345082 -49939230 + RSINE1 SINE B4 5 165 0 4 1121 204 125 0 0 chr13 70345105 70345137 -49939175 + (TGG)n Simple_repeat Simple_repeat 1 32 0 4 1121 387 0 0 0 chr13 70345757 70345800 -49938512 + (TATG)n Simple_repeat Simple_repeat 2 44 0 4 1121 580 289 56 42 chr13 70345924 70346137 -49938175 - ID_B1 SINE B4 -8 216 1 4 1121 225 333 44 32 chr13 70346200 70346358 -49937954 + MLT1E LTR MaLR 282 441 -212 4 1121 369 327 50 19 chr13 70346389 70346548 -49937764 + MLT1D LTR MaLR 313 476 -29 4 1121 360 216 113 30 chr13 70347823 70347958 -49936354 + Lx7 LINE L1 6945 7078 -618 4 1121 544 193 0 44 chr13 70348343 70348457 -49935855 - RMER1B Other Other -16 1050 942 4 1121 447 92 0 0 chr13 70348769 70348834 -49935478 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 1121 539 283 28 42 chr13 70349845 70350059 -49934253 + B3 SINE B2 1 211 -5 4 1121 269 312 13 0 chr13 70350444 70350521 -49933791 - ID4_ SINE ID -3 80 3 4 1121 459 295 43 73 chr13 70351061 70351361 -49932951 - B4A SINE B4 -1 291 1 4 1121 264 250 25 12 chr13 70352600 70352681 -49931631 + ID4_ SINE ID 2 83 0 4 1121 294 234 64 13 chr13 70352703 70352781 -49931531 + PB1D10 SINE Alu 4 85 -32 4 1121 214 179 0 49 chr13 70353808 70353890 -49930422 + (CA)n Simple_repeat Simple_repeat 2 79 0 4 1121 274 325 25 25 chr13 70354432 70354552 -49929760 - Tigger5 DNA MER2_type -2243 163 44 4 1121 461 244 65 13 chr13 70354770 70354924 -49929388 - MTEa LTR MaLR -13 366 205 4 1121 283 270 0 0 chr13 70354979 70355042 -49929270 - MTEa LTR MaLR -294 65 3 4 1121 864 29 0 0 chr13 70357150 70357253 -49927059 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 4 1121 1020 104 7 0 chr13 70357264 70357408 -49926904 - B1_Mus1 SINE Alu -2 146 2 4 1121 207 0 0 0 chr13 70357509 70357532 -49926780 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1121 280 238 0 99 chr13 70357732 70357923 -49926389 + CT-rich Low_complexity Low_complexity 3 174 0 4 1121 270 309 153 24 chr13 70358060 70358315 -49925997 + L1M2 LINE L1 5565 5852 -445 4 1121 25 0 0 0 chr13 70358634 70358659 -49925653 + AT_rich Low_complexity Low_complexity 1 25 0 4 1121 207 0 0 0 chr13 70359207 70359230 -49925082 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1121 23 0 0 0 chr13 70359948 70359971 -49924341 + AT_rich Low_complexity Low_complexity 1 23 0 4 1121 327 258 31 10 chr13 70360842 70360940 -49923372 + ORR1E LTR MaLR 142 241 -118 4 1121 2376 195 5 81 chr13 70362062 70362669 -49921643 + RLTR31_Mm LTR ERVK 1 561 0 4 1121 2421 244 96 35 chr13 70362928 70363315 -49920997 - RCHARR1 DNA MER1_type -15 959 582 4 1121 1658 195 85 25 chr13 70363315 70363498 -49920814 - ORR1D1 LTR MaLR 0 374 164 4 1121 576 0 0 0 chr13 70363498 70363562 -49920750 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 1121 1658 195 85 25 chr13 70363562 70363731 -49920581 - ORR1D1 LTR MaLR -211 163 1 4 1121 2421 244 96 35 chr13 70363731 70364202 -49920110 - RCHARR1 DNA MER1_type -393 581 49 4 1121 194 0 0 37 chr13 70364330 70364357 -49919955 + (CACAA)n Simple_repeat Simple_repeat 4 29 0 4 1121 498 247 0 0 chr13 70366613 70366775 -49917537 + (CA)n Simple_repeat Simple_repeat 1 162 0 4 1121 222 280 23 11 chr13 70366775 70366955 -49917357 + (CATG)n Simple_repeat Simple_repeat 1 182 0 4 1121 213 222 0 0 chr13 70367020 70367083 -49917229 + (CATA)n Simple_repeat Simple_repeat 1 63 0 4 1121 563 273 38 0 chr13 70369225 70369357 -49914955 - Lx8 LINE L1 -161 7312 7176 4 1121 414 0 0 0 chr13 70370883 70370929 -49913383 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1121 5455 90 106 17 chr13 70370929 70371803 -49912509 - RMER17B LTR ERVK -2 956 5 5 1121 1567 174 82 23 chr13 70374569 70374922 -49909390 - ORR1C1 LTR MaLR 0 378 5 5 1121 296 149 14 29 chr13 70375889 70375958 -49908354 - ORR1D2 LTR MaLR -302 68 1 5 1121 671 320 94 24 chr13 70375983 70376322 -49907990 - MTD LTR MaLR -56 363 1 5 1121 3389 33 8 0 chr13 70380390 70380783 -49903529 - MTA_Mm LTR MaLR 0 396 1 5 1121 8745 50 14 2 chr13 70380783 70381868 -49902444 - MTA_Mm-int LTR MaLR 0 1098 1 5 1121 3320 21 37 0 chr13 70381868 70382250 -49902062 - MTA_Mm LTR MaLR 0 396 1 5 1121 365 333 104 13 chr13 70383878 70384329 -49899983 + L1MEg LINE L1 432 923 -5161 5 1121 368 358 7 33 chr13 70384372 70384525 -49899787 + ORR1A2 LTR MaLR 1 149 -210 5 1121 4915 117 33 0 chr13 70384496 70385280 -49899032 + ORR1A2-int LTR MaLR 1154 1963 0 5 1121 2385 103 12 0 chr13 70385280 70385601 -49898711 + ORR1A2 LTR MaLR 1 325 -2 5 1122 2044 106 51 0 chr13 70386386 70386697 -49897615 - ORR1A4 LTR MaLR 0 329 3 5 1122 277 197 33 0 chr13 70387501 70387562 -49896750 - ID4 SINE ID -20 63 1 5 1122 251 203 0 42 chr13 70387568 70387640 -49896672 + CT-rich Low_complexity Low_complexity 4 72 0 5 1122 1043 203 83 0 chr13 70387641 70387907 -49896405 - Lx9 LINE L1 -7 7637 7350 5 1122 810 310 68 40 chr13 70389079 70389678 -49894634 + ORR1D1-int LTR MaLR 774 1905 -58 5 1122 234 265 155 10 chr13 70389703 70389806 -49894506 + ORR1D1 LTR MaLR 19 136 -238 5 1122 258 70 23 0 chr13 70389862 70389905 -49894407 - L1_Mus2 LINE L1 0 6566 6523 5 1122 966 275 49 56 chr13 70389908 70390212 -49894100 - MTD LTR MaLR -85 334 33 5 1122 304 285 97 30 chr13 70390255 70390389 -49893923 - MLT1A1 LTR MaLR -50 358 216 5 1122 856 10 0 0 chr13 70390692 70390795 -49893517 - L1Md_T LINE L1 0 6582 6480 5 1122 261 75 0 0 chr13 70390852 70390892 -49893420 + (T)n Simple_repeat Simple_repeat 1 40 0 5 1122 821 328 63 11 chr13 70391012 70391283 -49893029 - B4A SINE B4 -2 290 6 5 1122 326 286 174 0 chr13 70391891 70391989 -49892323 + MLT1C LTR MaLR 353 467 0 5 1122 12302 111 35 20 chr13 70392864 70396163 -49888149 + L1VL4 LINE L1 543 3914 0 5 1122 273 354 17 17 chr13 70396310 70396425 -49887887 - MLT1A0 LTR MaLR -249 116 2 5 1122 24 32 0 0 chr13 70398683 70398714 -49885598 + AT_rich Low_complexity Low_complexity 1 31 0 5 1122 1969 99 114 7 chr13 70399573 70399680 -49884632 - Lx2 LINE L1 -1 6996 6889 5 1122 324 0 0 0 chr13 70399680 70399716 -49884596 + (CTCA)n Simple_repeat Simple_repeat 2 37 0 5 1122 1969 99 114 7 chr13 70399716 70399914 -49884398 - Lx2 LINE L1 -109 6888 6659 5 1122 255 152 0 0 chr13 70400154 70400200 -49884112 + (TTAA)n Simple_repeat Simple_repeat 1 46 0 5 1122 1085 274 57 9 chr13 70400308 70400640 -49883672 + MTE2b LTR MaLR 19 366 -13 5 1122 514 326 34 38 chr13 70401562 70401798 -49882514 + RMER15 LTR ERVL 301 535 -40 5 1122 420 281 109 30 chr13 70401829 70402031 -49882281 + RMER15-int LTR ERVL 2 219 -4780 5 1122 691 351 46 26 chr13 70402057 70402510 -49881802 + RMER15-int LTR ERVL 268 729 -4270 5 1122 35652 80 7 8 chr13 70402707 70408988 -49875324 + L1Md_F2 LINE L1 358 6582 0 5 1122 451 270 132 81 chr13 70408988 70409246 -49875066 + RMER15-int LTR ERVL 949 1219 -3780 5 1122 484 325 20 10 chr13 70409423 70409619 -49874693 + RMER15-int LTR ERVL 1426 1623 -3376 5 1122 629 264 103 10 chr13 70410555 70410750 -49873562 + Lx6 LINE L1 7069 7281 -179 5 1122 341 253 24 12 chr13 70410779 70410863 -49873449 + RMER15-int LTR ERVL 2104 2188 -2811 5 1122 1105 264 32 23 chr13 70411040 70411350 -49872962 + RMER15-int LTR ERVL 4175 4487 -512 5 1122 615 245 12 12 chr13 70413177 70413338 -49870974 - RCHARR1 DNA MER1_type -1 973 813 5 1122 656 251 37 0 chr13 70413363 70413526 -49870786 - RCHARR1 DNA MER1_type -224 750 582 5 1122 650 233 7 26 chr13 70413523 70413677 -49870635 - RCHARR1 DNA MER1_type -818 156 6 5 1122 7464 66 13 1 chr13 70414168 70415714 -49868598 - L1_Mus1 LINE L1 -2 6565 4992 5 1122 2898 103 20 8 chr13 70415772 70416009 -49868303 + MTB_Mm LTR MaLR 3 242 -165 5 1122 489 34 0 0 chr13 70416009 70416068 -49868244 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1122 2898 103 20 8 chr13 70416068 70416230 -49868082 + MTB_Mm LTR MaLR 243 407 0 5 1122 392 331 52 0 chr13 70416454 70416626 -49867686 - MER53 DNA hAT -4 189 9 5 1122 210 345 82 27 chr13 70416863 70417009 -49867303 + L4 LINE RTE 1341 1494 -535 5 1122 372 185 36 18 chr13 70417829 70417994 -49866318 + (TG)n Simple_repeat Simple_repeat 2 169 0 5 1122 228 227 11 22 chr13 70418017 70418107 -49866205 + (TATATG)n Simple_repeat Simple_repeat 4 92 0 5 1122 30 45 0 0 chr13 70419321 70419365 -49864947 + AT_rich Low_complexity Low_complexity 1 44 0 5 1122 2139 121 2 105 chr13 70419761 70420156 -49864156 - ORR1A1 LTR MaLR 0 346 1 5 1122 240 226 0 0 chr13 70420350 70420412 -49863900 + GA-rich Low_complexity Low_complexity 1 62 0 5 1122 238 239 60 0 chr13 70420412 70420479 -49863833 - MLT2B3 LTR ERVL -71 491 421 5 1122 315 266 148 23 chr13 70420524 70420684 -49863628 - MLT2B3 LTR ERVL -307 249 78 5 1122 246 105 0 0 chr13 70422017 70422055 -49862257 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 5 1122 21 0 0 0 chr13 70422648 70422669 -49861643 + GC_rich Low_complexity Low_complexity 1 21 0 5 1122 23 86 0 0 chr13 70422826 70422884 -49861428 + AT_rich Low_complexity Low_complexity 1 58 0 5 1122 270 300 75 0 chr13 70423137 70423257 -49861055 + L1M4 LINE L1 5652 5780 -404 5 1122 571 273 33 45 chr13 70423277 70423432 -49860880 + RSINE1 SINE B4 1 163 -2 5 1122 228 233 156 89 chr13 70423432 70423449 -49860863 + B2_Mm2 SINE B2 49 193 -2 5 1122 405 283 53 9 chr13 70423452 70423566 -49860746 + PB1D7 SINE Alu 1 119 -1 5 1122 1599 5 0 0 chr13 70425009 70425225 -49859087 + (GAA)n Simple_repeat Simple_repeat 1 216 0 5 1122 611 303 30 10 chr13 70425675 70425875 -49858437 - RMER15 LTR ERVL -97 478 275 5 1122 309 267 114 57 chr13 70425901 70426024 -49858288 + MTE2a LTR MaLR 1 130 -249 5 1122 423 276 11 87 chr13 70425957 70426140 -49858172 + MT2A LTR ERVL 70 238 -295 5 1122 308 88 65 21 chr13 70426193 70426286 -49858026 + (TAGA)n Simple_repeat Simple_repeat 3 99 0 5 1122 392 370 78 0 chr13 70426302 70426494 -49857818 + LTR80B LTR ERVL 363 569 -15 5 1122 333 68 0 0 chr13 70426845 70426889 -49857423 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 5 1122 189 283 22 0 chr13 70427382 70427428 -49856884 - MIRb SINE MIR -47 221 175 5 1122 840 199 81 42 chr13 70429225 70429461 -49854851 + Lx9 LINE L1 5735 5979 -1665 5 1122 1790 301 57 35 chr13 70429617 70430272 -49854040 + Lx9 LINE L1 6318 6986 -658 5 1122 2656 312 24 28 chr13 70430459 70431310 -49853002 - Lx8 LINE L1 -361 7112 6266 5 1122 348 206 29 14 chr13 70432212 70432350 -49851962 + (CA)n Simple_repeat Simple_repeat 1 140 0 5 1122 531 0 0 0 chr13 70432398 70432457 -49851855 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1122 222 278 14 27 chr13 70432544 70432618 -49851694 + (TATG)n Simple_repeat Simple_repeat 3 75 0 5 1122 412 331 54 49 chr13 70432620 70432804 -49851508 - B4A SINE B4 0 292 108 5 1122 339 25 0 0 chr13 70432937 70432977 -49851335 + (TTGG)n Simple_repeat Simple_repeat 4 43 0 5 1122 1770 180 112 14 chr13 70433469 70433835 -49850477 - MTC LTR MaLR -19 402 1 5 1122 296 241 111 77 chr13 70433969 70434086 -49850226 + B1F1 SINE Alu 21 141 -8 5 1122 272 256 32 85 chr13 70434102 70434196 -49850116 + ID4 SINE ID 3 91 -61 5 1122 216 0 0 0 chr13 70434439 70434463 -49849849 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1122 261 0 0 0 chr13 70434824 70434853 -49849459 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1122 591 215 17 0 chr13 70435858 70436035 -49848277 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1122 425 186 15 15 chr13 70436092 70436223 -49848089 + (CA)n Simple_repeat Simple_repeat 2 132 0 5 1122 1641 166 190 16 chr13 70436695 70437074 -49847238 - RLTR41 LTR ERV1 0 446 1 5 1122 304 197 113 0 chr13 70437332 70437403 -49846909 + MTEa LTR MaLR 1 79 -300 5 1122 6423 120 35 9 chr13 70438355 70439288 -49845024 - RMER17B LTR ERVK 0 958 1 5 1122 28 29 0 0 chr13 70439811 70439846 -49844466 + AT_rich Low_complexity Low_complexity 1 35 0 5 1122 718 202 12 0 chr13 70440112 70440280 -49844032 + GA-rich Low_complexity Low_complexity 1 170 0 5 1122 374 316 55 97 chr13 70440280 70440518 -49843794 + ORR1E LTR MaLR 12 239 -131 5 1122 848 10 10 0 chr13 70440696 70440797 -49843515 + (TTTC)n Simple_repeat Simple_repeat 3 104 0 5 1122 1361 96 17 0 chr13 70440797 70440974 -49843338 - B2_Mm2 SINE B2 -15 180 1 5 1122 1991 90 29 0 chr13 70441248 70441525 -49842787 + ORR1A2 LTR MaLR 43 327 0 5 1122 182 282 81 69 chr13 70441855 70442015 -49842297 + MIRb SINE MIR 70 231 -37 5 1122 225 94 0 0 chr13 70443168 70443200 -49841112 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1122 313 260 52 0 chr13 70444152 70444248 -49840064 - MLT1C LTR MaLR -294 173 73 5 1122 428 283 12 42 chr13 70445726 70445892 -49838420 - RLTR11B LTR ERVK -20 433 273 5 1122 197 196 0 75 chr13 70447656 70447750 -49836562 + CT-rich Low_complexity Low_complexity 1 87 0 5 1122 911 231 40 5 chr13 70448513 70448713 -49835599 - B3 SINE B2 -9 207 1 5 1122 23 0 0 0 chr13 70448942 70448965 -49835347 + AT_rich Low_complexity Low_complexity 1 23 0 5 1122 207 259 0 65 chr13 70449316 70449378 -49834934 + polypyrimidine Low_complexity Low_complexity 4 61 0 5 1122 333 0 0 0 chr13 70450042 70450079 -49834233 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1122 222 118 0 0 chr13 70450708 70450742 -49833570 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 5 1122 196 149 21 21 chr13 70451135 70451183 -49833129 + CT-rich Low_complexity Low_complexity 4 51 0 5 1122 405 0 0 0 chr13 70451478 70451523 -49832789 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 5 1122 245 319 43 0 chr13 70452701 70452817 -49831495 - L1MB7 LINE L1 -29 6149 6029 5 1122 473 268 231 8 chr13 70452866 70453126 -49831186 - MTE2b LTR MaLR -3 376 59 5 1122 276 253 65 11 chr13 70453126 70453218 -49831094 - MTE2b LTR MaLR -280 99 3 5 1122 536 330 66 45 chr13 70453226 70453667 -49830645 - L1MB7 LINE L1 -193 5991 5542 5 1122 1584 31 0 54 chr13 70453982 70454186 -49830126 - B2_Mm1t SINE B2 0 193 1 5 1122 639 206 128 0 chr13 70454312 70454453 -49829859 + B3A SINE B2 2 160 -38 5 1122 6351 26 4 0 chr13 70456260 70456994 -49827318 + L1Md_F2 LINE L1 4849 5585 -298 5 1122 8285 43 2 7 chr13 70456995 70457996 -49826316 + L1Md_F2 LINE L1 5587 6582 0 5 1122 214 328 0 0 chr13 70458376 70458440 -49825872 + ID4_ SINE ID 6 69 -14 5 1122 456 19 0 0 chr13 70458456 70458509 -49825803 + (TAA)n Simple_repeat Simple_repeat 1 53 0 5 1122 650 243 27 38 chr13 70459384 70459568 -49824744 + B3A SINE B2 1 182 -16 5 1122 28 48 0 0 chr13 70459592 70459634 -49824678 + AT_rich Low_complexity Low_complexity 1 42 0 5 1122 3506 206 110 2 chr13 70460557 70461359 -49822953 - Lx9 LINE L1 -1 7643 6756 5 1122 495 87 0 0 chr13 70461856 70461925 -49822387 + (TA)n Simple_repeat Simple_repeat 1 69 0 5 1122 225 0 0 0 chr13 70461925 70461950 -49822362 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1122 285 145 0 98 chr13 70463283 70463319 -49820993 - ORR1C1 LTR MaLR 0 384 354 6 1122 2047 117 38 16 chr13 70463319 70463639 -49820673 - ORR1A2 LTR MaLR 0 327 1 6 1122 285 145 0 98 chr13 70463639 70463663 -49820649 - ORR1C1 LTR MaLR -31 353 330 6 1122 1243 54 0 0 chr13 70463685 70463832 -49820480 - B1_Mm SINE Alu 0 147 1 6 1122 1604 165 53 19 chr13 70463832 70464154 -49820158 - ORR1C1 LTR MaLR -41 337 5 6 1122 342 298 45 96 chr13 70464224 70464380 -49819932 - B4 SINE B4 -142 150 3 6 1122 210 128 0 0 chr13 70464911 70464950 -49819362 + (TATG)n Simple_repeat Simple_repeat 2 40 0 6 1122 270 326 57 102 chr13 70464970 70465127 -49819185 - RSINE1 SINE B4 -13 152 3 6 1122 381 234 0 41 chr13 70465381 70465479 -49818833 + RLTR18 LTR ERVK 1 94 -522 6 1122 1678 171 8 64 chr13 70465498 70465873 -49818439 + ORR1B1 LTR MaLR 41 394 0 6 1122 2239 175 63 33 chr13 70466204 70466694 -49817618 + RLTR18 LTR ERVK 111 615 -1 6 1122 243 0 0 0 chr13 70467055 70467082 -49817230 + (TG)n Simple_repeat Simple_repeat 2 28 0 6 1122 462 172 27 27 chr13 70467500 70467649 -49816663 + (CA)n Simple_repeat Simple_repeat 1 149 0 6 1122 199 185 43 11 chr13 70468125 70468218 -49816094 + (TG)n Simple_repeat Simple_repeat 1 96 0 6 1122 287 255 19 58 chr13 70470610 70470714 -49813598 - RMER4B LTR ERVK -460 125 26 6 1122 226 286 0 16 chr13 70472189 70472253 -49812059 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 1122 1906 117 32 3 chr13 70474026 70474335 -49809977 - ORR1A2 LTR MaLR -9 318 1 6 1122 181 167 18 18 chr13 70475303 70475358 -49808954 + CT-rich Low_complexity Low_complexity 2 56 0 6 1122 1300 275 84 19 chr13 70476341 70476805 -49807507 - RMER5 LTR ERV1 0 534 41 6 1122 224 221 0 9 chr13 70478252 70478366 -49805946 + CT-rich Low_complexity Low_complexity 2 114 0 6 1122 256 324 38 9 chr13 70479042 70479148 -49805164 - MLT1E1A LTR MaLR -189 491 383 6 1122 288 0 0 0 chr13 70479940 70479972 -49804340 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 1122 23 0 0 0 chr13 70480098 70480121 -49804191 + AT_rich Low_complexity Low_complexity 1 23 0 6 1122 1052 196 28 78 chr13 70480793 70481075 -49803237 + MTD LTR MaLR 1 268 -151 6 1122 271 228 38 0 chr13 70482201 70482280 -49802032 + (CA)n Simple_repeat Simple_repeat 2 83 0 6 1122 186 43 0 0 chr13 70482301 70482324 -49801988 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1122 240 231 38 13 chr13 70482366 70482445 -49801867 + (CATATA)n Simple_repeat Simple_repeat 5 85 0 6 1122 551 92 73 0 chr13 70482448 70482557 -49801755 + CT-rich Low_complexity Low_complexity 3 119 0 6 1122 447 106 0 0 chr13 70483614 70483680 -49800632 + (TC)n Simple_repeat Simple_repeat 1 66 0 6 1122 861 291 62 60 chr13 70483954 70484383 -49799929 - RLTR26 LTR ERVK -179 463 6 6 1122 539 241 45 56 chr13 70484655 70484853 -49799459 + RLTR40 LTR ERVK 417 612 -205 6 1122 1175 35 7 0 chr13 70485201 70485342 -49798970 + B1_Mm SINE Alu 1 142 -5 6 1122 351 96 0 0 chr13 70485344 70485396 -49798916 + (A)n Simple_repeat Simple_repeat 1 52 0 6 1122 248 215 39 88 chr13 70488142 70488244 -49796068 - MLT1A1 LTR MaLR -4 404 308 6 1122 4328 94 30 58 chr13 70488592 70489362 -49794950 - RMER17A LTR ERVK 0 751 4 6 1122 405 0 0 0 chr13 70489517 70489562 -49794750 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1122 5942 79 14 28 chr13 70489565 70490402 -49793910 - L1_Mus3 LINE L1 -9 6629 5804 6 1122 252 111 0 0 chr13 70490829 70490874 -49793438 + (T)n Simple_repeat Simple_repeat 1 45 0 6 1122 3005 82 113 4 chr13 70491288 70491764 -49792548 + RLTR47_MM LTR ERV1 1 528 -4 6 1122 824 262 41 115 chr13 70491790 70492156 -49792156 - MTE2a LTR MaLR -21 358 20 6 1122 441 0 0 0 chr13 70492195 70492244 -49792068 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1122 688 319 39 14 chr13 70492272 70492552 -49791760 - B4A SINE B4 -3 289 3 6 1122 475 229 31 16 chr13 70492587 70492778 -49791534 - RMER17C LTR ERVK -133 277 84 6 1122 213 125 0 0 chr13 70492830 70492849 -49791463 + (T)n Simple_repeat Simple_repeat 1 19 0 6 1122 1200 61 0 0 chr13 70492849 70492996 -49791316 - B1_Mus1 SINE Alu 0 148 2 6 1122 213 125 0 0 chr13 70492996 70493016 -49791296 + (T)n Simple_repeat Simple_repeat 1 20 0 6 1122 2472 50 37 0 chr13 70493931 70494231 -49790081 - RLTR10E LTR ERVK 0 311 1 6 1122 341 367 29 0 chr13 70495317 70495456 -49788856 + RSINE1 SINE B4 2 144 -21 6 1122 29 94 0 0 chr13 70495573 70495658 -49788654 + AT_rich Low_complexity Low_complexity 1 85 0 6 1122 767 257 146 29 chr13 70497790 70498139 -49786173 - Lx8 LINE L1 0 7473 7084 6 1122 369 248 169 8 chr13 70498806 70498936 -49785376 - MLT1D LTR MaLR -76 429 279 6 1122 252 152 22 0 chr13 70501121 70501167 -49783145 + L1M3 LINE L1 5693 5739 -450 1 1122 401 346 7 29 chr13 70501348 70501488 -49782824 + RSINE1 SINE B4 1 137 -28 2 1122 1243 24 42 18 chr13 70501522 70501689 -49782623 + L1Md_F3 LINE L1 6414 6584 0 3 1122 482 203 22 7 chr13 70502880 70503019 -49781293 + (TA)n Simple_repeat Simple_repeat 2 142 0 4 1122 2013 197 45 5 chr13 70503056 70503459 -49780853 - MT2A LTR ERVL -73 460 42 5 1122 712 268 18 6 chr13 70503932 70504101 -49780211 + MTD LTR MaLR 20 190 -229 6 1122 324 127 0 53 chr13 70504158 70504231 -49780081 + MTD LTR MaLR 306 405 -14 6 1122 7827 100 2 7 chr13 70505177 70507033 -49777279 + L1_Mus3 LINE L1 4793 6637 -1 7 1122 249 167 13 40 chr13 70507036 70507111 -49777201 + (TATATG)n Simple_repeat Simple_repeat 1 73 0 8 1122 355 36 17 35 chr13 70507111 70507169 -49777143 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 9 1122 863 95 14 7 chr13 70507256 70507394 -49776918 - URR1A DNA MER1_type -7 219 81 1 1122 704 143 8 0 chr13 70507614 70507740 -49776572 + CT-rich Low_complexity Low_complexity 3 129 0 1 1122 331 190 49 37 chr13 70507872 70507954 -49776358 + B1F2 SINE Alu 1 83 -66 1 1122 369 62 0 0 chr13 70509130 70509178 -49775134 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1122 322 275 33 0 chr13 70509751 70509842 -49774470 - L1ME3A LINE L1 -179 5994 5901 1 1122 429 20 0 0 chr13 70509882 70509932 -49774380 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1122 22 70 0 0 chr13 70510217 70510260 -49774052 + AT_rich Low_complexity Low_complexity 1 43 0 1 1122 2762 52 3 11 chr13 70510873 70511220 -49773092 - L1_Mus2 LINE L1 -407 6159 5816 1 1122 2723 115 2 30 chr13 70511220 70511650 -49772662 + L1_Mus2 LINE L1 6149 6566 0 1 1122 258 268 0 0 chr13 70511880 70511936 -49772376 - ID4 SINE ID -2 81 26 1 1122 408 40 0 0 chr13 70512188 70512238 -49772074 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1122 2917 92 17 10 chr13 70512332 70512736 -49771576 + MTB_Mm LTR MaLR 1 407 0 2 1122 332 294 25 0 chr13 70512882 70513001 -49771311 + (TG)n Simple_repeat Simple_repeat 1 122 0 2 1122 527 268 180 57 chr13 70513772 70514156 -49770156 + MLT1D LTR MaLR 3 433 -72 2 1122 379 220 155 7 chr13 70514676 70514818 -49769494 - MLT1A LTR MaLR -53 321 159 2 1122 301 382 23 0 chr13 70514823 70514954 -49769358 + Lx8 LINE L1 7194 7327 -146 2 1122 812 265 0 68 chr13 70515823 70516042 -49768270 - ID_B1 SINE B4 -7 217 14 2 140 576 362 39 25 chr13 70516605 70516962 -49767350 + MLT1A0 LTR MaLR 4 365 0 2 1123 3504 73 60 4 chr13 70517397 70517902 -49766410 + L1_Mus3 LINE L1 6121 6638 0 2 1123 345 274 7 88 chr13 70519514 70519662 -49764650 + MamRep434 DNA TcMar 139 274 -152 2 1123 1528 199 54 14 chr13 70520945 70521039 -49763273 - RLTR20D LTR ERVK 0 568 462 2 1123 453 50 0 0 chr13 70521039 70521099 -49763213 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1123 480 35 0 0 chr13 70521099 70521156 -49763156 + (GA)n Simple_repeat Simple_repeat 2 59 0 3 1123 1528 199 54 14 chr13 70521156 70521412 -49762900 - RLTR20D LTR ERVK -107 461 204 2 1123 253 258 45 0 chr13 70521397 70521463 -49762849 + RLTR20D LTR ERVK 500 568 0 3 1123 329 324 118 44 chr13 70521859 70522067 -49762245 - Charlie1b DNA MER1_type -98 425 207 3 1123 1324 251 105 16 chr13 70522067 70522448 -49761864 + MTD LTR MaLR 5 419 0 3 1123 329 324 118 44 chr13 70522448 70522629 -49761683 - Charlie1b DNA MER1_type -317 206 8 3 1123 643 281 126 14 chr13 70522744 70523109 -49761203 - L1ME2z LINE L1 -5 6439 6034 3 1123 257 371 113 0 chr13 70523975 70524126 -49760186 - LTR33 LTR ERVL -13 502 335 3 1123 1052 279 35 95 chr13 70525050 70525070 -49759242 - MTD LTR MaLR -21 398 384 3 1123 183 42 0 0 chr13 70525070 70525094 -49759218 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1123 1052 279 35 95 chr13 70525094 70525346 -49758966 - MTD LTR MaLR -36 383 125 3 1123 1280 20 0 0 chr13 70525346 70525499 -49758813 + L1Md_A LINE L1 6429 6581 -1 3 1123 1052 279 35 95 chr13 70525499 70525648 -49758664 - MTD LTR MaLR -295 124 1 3 1123 294 29 0 0 chr13 70526032 70526067 -49758245 + (TGG)n Simple_repeat Simple_repeat 1 35 0 4 1123 8208 52 3 0 chr13 70526255 70527720 -49756592 - L1Md_F2 LINE L1 -2 6580 5111 4 1123 302 408 34 0 chr13 70527861 70528094 -49756218 - Lx8 LINE L1 -244 7229 6989 4 1123 390 91 0 0 chr13 70528094 70528149 -49756163 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 4 1123 1218 87 0 0 chr13 70528149 70528322 -49755990 + (TTTC)n Simple_repeat Simple_repeat 3 175 0 4 1123 38893 42 0 3 chr13 70528333 70534633 -49749679 - L1Md_T LINE L1 -12 6573 198 4 1123 657 0 0 0 chr13 70534633 70534706 -49749606 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 4 1123 3640 56 0 0 chr13 70534767 70535210 -49749102 - L1_Mus1 LINE L1 -2 6565 6123 4 1123 4530 72 0 0 chr13 70535210 70535793 -49748519 - L1_Mm LINE L1 -390 5493 4911 4 1123 705 293 86 10 chr13 70535818 70536132 -49748180 - Lx8 LINE L1 -461 7012 6675 4 1123 260 27 0 26 chr13 70536145 70536183 -49748129 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 5 1123 435 226 0 15 chr13 70536255 70536390 -49747922 - MER33 DNA MER1_type -16 308 176 5 1123 1317 172 77 0 chr13 70536564 70536837 -49747475 - MTD LTR MaLR -12 407 114 5 1123 488 31 0 30 chr13 70536837 70536904 -49747408 + (GAAA)n Simple_repeat Simple_repeat 1 65 0 5 1123 509 229 0 0 chr13 70536909 70537014 -49747298 - MTD LTR MaLR -314 105 1 5 1123 189 0 0 0 chr13 70537588 70537609 -49746703 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 5 1123 321 240 0 0 chr13 70537609 70537705 -49746607 + (TG)n Simple_repeat Simple_repeat 2 97 0 5 1123 472 264 23 76 chr13 70537710 70537882 -49746430 - RSINE1 SINE B4 0 165 3 5 1123 974 231 94 58 chr13 70538251 70538559 -49745753 - ORR1D2 LTR MaLR -4 366 48 5 1123 3415 40 2 0 chr13 70539215 70539610 -49744702 - MTA_Mm LTR MaLR 0 396 1 5 1123 8617 46 38 1 chr13 70539610 70540669 -49743643 - MTA_Mm-int LTR MaLR 0 1098 1 5 1123 2982 33 10 44 chr13 70540669 70540889 -49743423 - MTA_Mm LTR MaLR 0 396 190 5 1123 4789 59 0 2 chr13 70540889 70541479 -49742833 - L1Md_F2 LINE L1 0 6582 5994 5 1123 2982 33 10 44 chr13 70541479 70541668 -49742644 - MTA_Mm LTR MaLR -207 189 1 5 1123 183 156 44 69 chr13 70542101 70542154 -49742158 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 6 1123 261 0 0 0 chr13 70542154 70542183 -49742129 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1123 183 156 44 69 chr13 70542183 70542288 -49742024 + (TCTA)n Simple_repeat Simple_repeat 3 105 0 6 1123 477 355 70 86 chr13 70543390 70543775 -49740537 - MTEb LTR MaLR 0 379 1 6 1123 1083 251 90 51 chr13 70543993 70544215 -49740097 - ORR1D2 LTR MaLR 0 370 149 6 1123 1298 212 63 117 chr13 70544215 70544610 -49739702 - ORR1D1 LTR MaLR 0 374 1 6 1123 1083 251 90 51 chr13 70544610 70544743 -49739569 - ORR1D2 LTR MaLR -222 148 1 6 1123 706 304 143 23 chr13 70545540 70545890 -49738422 + MTE-int LTR MaLR 2 393 -1187 6 1123 595 253 118 51 chr13 70545904 70546158 -49738154 - MTE-int LTR MaLR -355 1225 955 6 1123 492 59 0 0 chr13 70547092 70547160 -49737152 + (CA)n Simple_repeat Simple_repeat 2 69 0 6 1123 297 0 0 0 chr13 70547377 70547410 -49736902 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1123 315 0 0 0 chr13 70548047 70548082 -49736230 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1123 338 298 9 19 chr13 70548337 70548443 -49735869 + (CATA)n Simple_repeat Simple_repeat 3 107 0 7 1123 210 205 0 0 chr13 70548860 70548899 -49735413 - MIRc SINE MIR -117 151 113 7 1123 210 192 0 0 chr13 70549737 70549789 -49734523 + (TA)n Simple_repeat Simple_repeat 2 53 0 7 1123 254 337 21 0 chr13 70551109 70551204 -49733108 - L1M3 LINE L1 -1319 4821 4725 7 1123 599 223 0 0 chr13 70551242 70551354 -49732958 - PB1D9 SINE Alu -8 112 1 7 1123 413 298 133 17 chr13 70552192 70552486 -49731826 + Lx9 LINE L1 7294 7621 -23 7 1123 253 288 128 8 chr13 70552558 70552691 -49731621 - B1F SINE Alu 0 149 1 7 1123 3205 206 29 10 chr13 70553994 70554795 -49729517 + Lx2B LINE L1 6149 7008 0 7 1123 263 302 82 26 chr13 70558759 70558953 -49725359 - L1MD3 LINE L1 -14 7981 7777 7 1123 246 278 40 30 chr13 70558975 70559075 -49725237 - L1MD3 LINE L1 -277 7718 7618 7 1123 377 267 12 0 chr13 70560538 70560624 -49723688 - RLTR20A2 LTR ERVK 0 578 492 8 1123 306 0 0 0 chr13 70560624 70560658 -49723654 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 1123 29 0 0 0 chr13 70560659 70560688 -49723624 + AT_rich Low_complexity Low_complexity 1 29 0 8 1123 237 108 0 0 chr13 70560725 70560762 -49723550 + (TAAAA)n Simple_repeat Simple_repeat 3 39 0 8 1123 201 74 0 0 chr13 70561492 70561519 -49722793 + (TCC)n Simple_repeat Simple_repeat 1 27 0 8 1123 3005 122 15 0 chr13 70561646 70562123 -49722189 - RLTR20A2 LTR ERVK -94 484 1 8 1123 657 134 0 0 chr13 70563129 70563241 -49721071 + (CA)n Simple_repeat Simple_repeat 1 112 0 8 1123 252 246 0 15 chr13 70563772 70563838 -49720474 + MER31B LTR ERV1 4 68 -398 8 1123 1371 232 46 14 chr13 70563921 70564271 -49720041 - ORR1D1 LTR MaLR -6 368 8 8 1123 260 278 80 44 chr13 70564286 70564399 -49719913 + MER31B LTR ERV1 244 360 -106 8 1123 1166 251 80 15 chr13 70564676 70565012 -49719300 + ORR1D2 LTR MaLR 3 360 -10 8 1123 1627 158 21 52 chr13 70566181 70566509 -49717803 - RLTR11A LTR ERVK -14 514 197 8 1123 684 67 0 0 chr13 70566637 70566726 -49717586 - L1_Mm LINE L1 -3484 2399 2311 9 1123 2293 76 16 0 chr13 70566726 70567030 -49717282 + L1_Mus1 LINE L1 6259 6567 0 9 1123 299 287 0 31 chr13 70567229 70567326 -49716986 - ID_B1 SINE B4 -1 223 130 9 1123 595 261 48 6 chr13 70567832 70567998 -49716314 + B3A SINE B2 1 173 -25 9 1123 234 0 0 0 chr13 70568647 70568673 -49715639 + (T)n Simple_repeat Simple_repeat 1 26 0 9 1123 423 38 0 0 chr13 70568725 70568778 -49715534 + (CA)n Simple_repeat Simple_repeat 2 54 0 9 1123 334 322 79 104 chr13 70568793 70569147 -49715165 + ORR1E LTR MaLR 3 347 -12 9 1123 206 338 0 0 chr13 70569836 70569904 -49714408 + CT-rich Low_complexity Low_complexity 1 68 0 9 1123 235 337 10 19 chr13 70569932 70569943 -49714369 - ID_B1 SINE B4 -41 183 82 9 1123 263 311 11 22 chr13 70569943 70570035 -49714277 - PB1D10 SINE Alu -26 91 1 9 1123 323 189 302 0 chr13 70570152 70570258 -49714054 + Lx8 LINE L1 6815 6952 -521 1 1123 260 148 0 69 chr13 70570258 70570316 -49713996 + MT2B2 LTR ERVL 535 601 0 1 1123 241 241 0 0 chr13 70570317 70570371 -49713941 + Lx8 LINE L1 7417 7470 -3 1 1123 221 128 0 41 chr13 70570402 70570451 -49713861 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 1123 375 342 130 9 chr13 70572448 70572764 -49711548 + MLT1C LTR MaLR 113 466 -1 1 1123 341 340 58 34 chr13 70572792 70573087 -49711225 + L1MB5 LINE L1 5814 6115 -59 1 1123 753 12 0 0 chr13 70573301 70573387 -49710925 + (TC)n Simple_repeat Simple_repeat 2 87 0 1 1123 591 151 9 0 chr13 70573640 70573746 -49710566 + URR1B DNA MER1_type 119 225 0 1 1123 317 345 105 8 chr13 70573822 70574070 -49710242 - MLT-int LTR MaLR -1388 347 76 1 1123 350 235 0 0 chr13 70574571 70574652 -49709660 + Lx7 LINE L1 6754 6834 -862 1 1123 807 270 43 69 chr13 70574677 70575095 -49709217 + BGLII_B LTR ERVK 3 409 -32 1 1123 1030 288 89 17 chr13 70575112 70575462 -49708850 + Lx7 LINE L1 6880 7254 -442 1 1123 233 244 46 11 chr13 70575540 70575627 -49708685 + T-rich Low_complexity Low_complexity 3 92 0 1 1123 192 40 0 0 chr13 70575789 70575814 -49708498 + (TC)n Simple_repeat Simple_repeat 1 25 0 1 1123 330 167 0 0 chr13 70575817 70575877 -49708435 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 1123 1615 164 87 15 chr13 70578803 70579138 -49705174 - ORR1B2 LTR MaLR -8 359 1 1 1123 460 317 165 32 chr13 70579699 70580038 -49704274 + MLT2C1 LTR ERVL 8 391 -6 1 1123 222 37 0 0 chr13 70580843 70580870 -49703442 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1123 235 224 17 33 chr13 70582799 70582859 -49701453 + L1M2b LINE L1 338 396 -6813 1 1123 252 0 0 0 chr13 70583532 70583560 -49700752 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 1123 417 20 0 0 chr13 70583560 70583609 -49700703 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1123 214 152 43 0 chr13 70583632 70583678 -49700634 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1 1123 21 0 0 0 chr13 70583975 70583996 -49700316 + AT_rich Low_complexity Low_complexity 1 21 0 1 1123 522 313 6 0 chr13 70584513 70584679 -49699633 + L1MEc LINE L1 37 203 -6197 1 1123 1165 292 40 0 chr13 70584774 70585103 -49699209 + MTD LTR MaLR 1 342 -77 1 1123 192 167 0 0 chr13 70585220 70585268 -49699044 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1123 323 264 200 39 chr13 70585529 70585789 -49698523 + L1MEc LINE L1 1071 1372 -5028 1 1123 639 252 40 11 chr13 70585939 70586137 -49698175 + B3A SINE B2 3 204 -12 1 1123 813 65 0 0 chr13 70586173 70586281 -49698031 + (GGGA)n Simple_repeat Simple_repeat 4 111 0 1 1123 232 180 20 0 chr13 70586281 70586331 -49697981 + (CAGAGA)n Simple_repeat Simple_repeat 5 55 0 1 1123 300 307 77 22 chr13 70586354 70586537 -49697775 + L1MEc LINE L1 1663 1855 -4560 1 1123 2300 118 3 18 chr13 70588743 70589071 -49695241 + ORR1A2 LTR MaLR 2 324 -3 1 1123 727 125 0 0 chr13 70589082 70589194 -49695118 + ORR1A3 LTR MaLR 215 326 0 1 1123 213 0 81 0 chr13 70589755 70589792 -49694520 + (CAA)n Simple_repeat Simple_repeat 2 41 0 1 1123 333 0 0 0 chr13 70590742 70590779 -49693533 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1123 21 36 0 0 chr13 70590987 70591015 -49693297 + AT_rich Low_complexity Low_complexity 1 28 0 1 1123 457 364 134 28 chr13 70591052 70591744 -49692568 + Lx8 LINE L1 6698 7463 -10 1 1123 241 291 0 0 chr13 70592427 70592482 -49691830 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1123 369 243 11 22 chr13 70592487 70592668 -49691644 + (CATA)n Simple_repeat Simple_repeat 2 180 0 1 1123 290 267 0 0 chr13 70592669 70592744 -49691568 + (CA)n Simple_repeat Simple_repeat 2 76 0 1 1123 262 331 96 0 chr13 70592770 70592906 -49691406 - MER20 DNA MER1_type -40 179 31 1 1123 2922 51 0 0 chr13 70594439 70594791 -49689521 + L1Md_F2 LINE L1 5235 5586 -297 1 1123 8380 49 1 0 chr13 70594791 70595786 -49688526 + L1Md_F2 LINE L1 5587 6582 0 1 1123 180 0 0 0 chr13 70596134 70596154 -49688158 + (TA)n Simple_repeat Simple_repeat 2 21 0 1 1123 4278 141 20 52 chr13 70598350 70599131 -49685181 - RMER6A LTR ERVK 0 756 1 1 1123 525 71 0 0 chr13 70599146 70599216 -49685096 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1123 740 88 9 0 chr13 70599216 70599330 -49684982 + (GA)n Simple_repeat Simple_repeat 2 116 0 1 1123 180 135 0 0 chr13 70599885 70599922 -49684390 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1 1123 605 221 14 14 chr13 70601254 70601396 -49682916 - B1F SINE Alu -7 142 1 1 1123 935 284 15 122 chr13 70601476 70601885 -49682427 - MTE2a LTR MaLR -14 365 1 1 1123 327 290 93 41 chr13 70603122 70603316 -49680996 + BLACKJACK DNA AcHobo 741 944 -2000 1 1123 375 302 92 31 chr13 70603488 70603847 -49680465 + BLACKJACK DNA AcHobo 1300 1680 -1264 1 1123 700 269 102 55 chr13 70604106 70604681 -49679631 + L1ME2 LINE L1 5481 6139 -305 1 1123 33500 76 30 1 chr13 70604892 70607305 -49677007 - L1Md_F2 LINE L1 -1 6581 4150 1 1123 3058 37 8 23 chr13 70607305 70607739 -49676573 - L1Md_F3 LINE L1 0 6584 6191 1 1123 33500 105 44 11 chr13 70607739 70611496 -49672816 - L1Md_F2 LINE L1 -1734 4149 210 1 1123 254 363 58 12 chr13 70611526 70611699 -49672613 - MLT1D LTR MaLR -191 314 134 1 1123 380 302 122 42 chr13 70612162 70612563 -49671749 + BLACKJACK DNA AcHobo 1861 2293 -651 1 1123 32 75 0 0 chr13 70612743 70612810 -49671502 + AT_rich Low_complexity Low_complexity 1 67 0 1 1123 2217 144 0 0 chr13 70613040 70613386 -49670926 - MTB_Mm LTR MaLR -61 346 1 1 1123 2311 153 112 18 chr13 70613391 70613889 -49670423 - MTB_Mm-int LTR MaLR -9 1249 705 1 1123 1761 173 26 2 chr13 70613893 70614419 -49669893 - L1_Mur3 LINE L1 -4357 1520 984 1 1123 601 259 15 51 chr13 70614871 70615066 -49669246 - B3A SINE B2 -9 189 2 1 1123 2844 73 68 3 chr13 70615590 70615972 -49668340 + MTB_Mm LTR MaLR 1 407 0 1 1123 1065 57 14 7 chr13 70616327 70616469 -49667843 + B1_Mm SINE Alu 5 147 0 1 1123 250 126 62 67 chr13 70617748 70617927 -49666385 + (CACAG)n Simple_repeat Simple_repeat 1 178 0 1 1123 303 108 62 67 chr13 70618093 70618272 -49666040 + (CACAG)n Simple_repeat Simple_repeat 1 178 0 1 1123 303 108 62 67 chr13 70618318 70618497 -49665815 + (CACAG)n Simple_repeat Simple_repeat 1 178 0 1 1123 488 59 0 14 chr13 70618908 70618977 -49665335 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1123 21 0 0 0 chr13 70619137 70619158 -49665154 + AT_rich Low_complexity Low_complexity 1 21 0 1 1123 443 328 91 19 chr13 70619781 70619989 -49664323 + Lx8 LINE L1 7151 7373 -100 1 1123 18802 174 100 33 chr13 70619998 70621417 -49662895 + L1_Mur2 LINE L1 575 2061 -3816 1 1123 414 0 0 0 chr13 70621417 70621463 -49662849 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1123 387 0 0 0 chr13 70621463 70621505 -49662807 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1123 18802 131 44 31 chr13 70621505 70622308 -49662004 + L1_Mur2 LINE L1 2062 2891 -2986 1 1123 279 0 0 0 chr13 70622308 70622339 -49661973 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 1 1123 18802 131 44 31 chr13 70622339 70624082 -49660230 + L1_Mur2 LINE L1 2892 4668 -1209 1 1123 922 147 6 0 chr13 70624093 70624249 -49660063 + RLTR1B LTR ERV1 356 512 0 1 1123 13293 77 68 87 chr13 70624249 70624694 -49659618 + RLTR1B-int LTR ERV1 1 310 -2989 1 1123 207 0 0 0 chr13 70624694 70624717 -49659595 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1123 13293 77 68 87 chr13 70624717 70624993 -49659319 + RLTR1B-int LTR ERV1 311 609 -2690 1 1123 198 0 0 0 chr13 70624993 70625015 -49659297 + (CCA)n Simple_repeat Simple_repeat 3 24 0 1 1123 13293 77 68 87 chr13 70625015 70625531 -49658781 + RLTR1B-int LTR ERV1 610 1137 -2162 1 1123 474 18 0 0 chr13 70625531 70625586 -49658726 + (GA)n Simple_repeat Simple_repeat 1 55 0 1 1123 13293 87 40 50 chr13 70625586 70627113 -49657199 + RLTR1B-int LTR ERV1 1138 3299 0 1 1123 3148 54 26 0 chr13 70627113 70627538 -49656774 + RLTR1B LTR ERV1 1 436 -76 1 1123 6363 158 28 25 chr13 70627543 70628866 -49655446 + Lx5 LINE L1 4661 6006 -1044 1 1123 3390 176 109 11 chr13 70628860 70629557 -49654755 + Lx5 LINE L1 6286 7050 0 1 1123 218 213 0 0 chr13 70629727 70629774 -49654538 + T-rich Low_complexity Low_complexity 1 47 0 1 1123 3280 55 12 5 chr13 70630489 70630919 -49653393 + L1Md_F2 LINE L1 6152 6582 0 1 1123 338 58 0 147 chr13 70631570 70631956 -49652356 + (CAGAT)n Simple_repeat Simple_repeat 1 329 0 1 1123 181 0 17 149 chr13 70631960 70632135 -49652177 + (ACTCG)n Simple_repeat Simple_repeat 5 156 0 1 1123 301 34 0 152 chr13 70632136 70632307 -49652005 + (CAGAT)n Simple_repeat Simple_repeat 5 149 0 1 1123 189 171 0 0 chr13 70632743 70632778 -49651534 + CT-rich Low_complexity Low_complexity 3 37 0 1 1123 414 0 0 0 chr13 70632903 70632949 -49651363 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1123 2941 86 34 10 chr13 70633088 70633499 -49650813 - BGLII LTR ERVK 0 421 1 1 1123 2777 207 50 37 chr13 70633504 70634258 -49650054 - RMER3D-int LTR ERVK -5 2837 2074 1 1123 234 329 105 19 chr13 70634596 70634853 -49649459 - L1M5 LINE L1 -1411 4735 4457 1 1123 369 0 0 0 chr13 70636759 70636800 -49647512 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 1123 402 21 0 0 chr13 70636800 70636847 -49647465 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1123 1756 109 8 0 chr13 70636901 70637166 -49647146 - L1_Mur1 LINE L1 -512 5374 5108 1 1123 2172 146 132 12 chr13 70637162 70637552 -49646760 + Lx3B LINE L1 6524 6964 -9 1 1123 216 0 0 0 chr13 70637552 70637576 -49646736 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1123 507 78 0 0 chr13 70637838 70637915 -49646397 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1123 382 326 145 28 chr13 70639267 70639412 -49644900 + RSINE1 SINE B4 3 164 -1 1 1123 405 102 0 0 chr13 70639412 70639471 -49644841 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1123 442 308 225 20 chr13 70639521 70639863 -49644449 - MLT1D LTR MaLR -91 414 3 1 1123 279 268 14 0 chr13 70640008 70640079 -49644233 + ID4_ SINE ID 2 73 -10 1 1123 240 289 44 0 chr13 70641036 70641126 -49643186 + Lx9 LINE L1 7536 7629 -15 1 1123 254 267 0 0 chr13 70642049 70642109 -49642203 - PB1D7 SINE Alu -44 76 17 1 1123 561 293 120 9 chr13 70643243 70643460 -49640852 + MLT1A0 LTR MaLR 125 365 0 1 1123 1719 11 11 0 chr13 70643588 70643779 -49640533 + B2_Mm1t SINE B2 1 193 0 1 1123 780 182 11 6 chr13 70643854 70644031 -49640281 + T-rich Low_complexity Low_complexity 1 178 0 1 1123 549 44 0 0 chr13 70644062 70644130 -49640182 + (TTTCC)n Simple_repeat Simple_repeat 4 71 0 1 1123 943 56 0 0 chr13 70644131 70644256 -49640056 - B1_Mm SINE Alu -11 136 12 1 1123 3053 50 37 3 chr13 70644947 70645328 -49638984 + MTA_Mm LTR MaLR 1 394 -2 1 1123 206 32 0 31 chr13 70645990 70646022 -49638290 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1123 439 289 107 17 chr13 70646504 70646724 -49637588 - L1MB1 LINE L1 -280 5903 5666 1 1123 312 276 0 13 chr13 70646934 70647011 -49637301 - ID4 SINE ID -1 82 7 1 1123 293 0 27 0 chr13 70647098 70647135 -49637177 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1124 382 279 89 18 chr13 70649140 70649308 -49635004 + B3A SINE B2 3 182 -16 2 1124 372 325 134 30 chr13 70650521 70650819 -49633493 + MLT1A0 LTR MaLR 37 365 0 2 1124 1136 0 0 0 chr13 70655244 70655369 -49628943 - L1_Mm LINE L1 -821 5062 4938 2 1124 667 35 0 0 chr13 70655369 70655456 -49628856 + L1Md_T LINE L1 6496 6582 0 2 1124 225 0 0 0 chr13 70655465 70655490 -49628822 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1124 871 265 84 26 chr13 70655531 70655841 -49628471 + MTE2b LTR MaLR 8 335 -44 2 1124 553 294 121 53 chr13 70655846 70656184 -49628128 + MTE-int LTR MaLR 14 374 -1206 2 1124 1960 321 67 15 chr13 70656211 70657014 -49627298 + MTE-int LTR MaLR 543 1387 -193 2 1124 925 243 178 28 chr13 70657076 70657402 -49626910 + MTE2b LTR MaLR 3 377 -2 2 1124 740 270 65 0 chr13 70657633 70657833 -49626479 + B3 SINE B2 1 213 -3 2 1124 40315 24 7 6 chr13 70659370 70665487 -49618825 - L1Md_A LINE L1 -1 6581 462 2 1124 308 119 29 43 chr13 70669534 70669604 -49614708 - Lx7 LINE L1 0 7696 7628 2 1124 1134 224 84 39 chr13 70669866 70670224 -49614088 + ORR1D1 LTR MaLR 1 374 0 2 1124 209 269 0 29 chr13 70670842 70670911 -49613401 + GA-rich Low_complexity Low_complexity 1 67 0 2 1124 426 20 0 0 chr13 70672157 70672208 -49612104 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1124 1710 210 154 30 chr13 70672585 70673046 -49611266 + RMER15 LTR ERVL 46 563 -12 2 1124 253 368 36 117 chr13 70674053 70674302 -49610010 + MER115 DNA Tip100 1 229 -464 2 1124 370 43 0 0 chr13 70676565 70676611 -49607701 - HAL1-3A_ME LINE L1 -837 2021 1976 2 1124 431 239 8 0 chr13 70676611 70676741 -49607571 + (TG)n Simple_repeat Simple_repeat 1 131 0 2 1124 200 231 30 15 chr13 70676760 70676826 -49607486 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1124 183 139 0 0 chr13 70676826 70676862 -49607450 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1124 350 306 49 8 chr13 70676877 70676999 -49607313 - MT2A LTR ERVL -81 452 326 2 1124 840 171 215 6 chr13 70677019 70677196 -49607116 + B3 SINE B2 1 214 -2 2 1124 1705 265 80 22 chr13 70677308 70678405 -49605907 - RMER1A Other Other -542 524 1 2 1124 595 236 156 6 chr13 70679019 70679198 -49605114 + B3 SINE B2 7 212 -4 2 1124 1003 226 61 5 chr13 70679666 70679862 -49604450 + B3 SINE B2 10 216 0 2 1124 732 200 0 0 chr13 70680177 70680357 -49603955 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1124 522 0 0 0 chr13 70680359 70680417 -49603895 + (TA)n Simple_repeat Simple_repeat 2 59 0 2 1124 411 368 92 31 chr13 70681295 70681847 -49602465 - L1MB5 LINE L1 -215 5959 5374 2 1124 414 0 0 0 chr13 70681933 70681979 -49602333 + (TA)n Simple_repeat Simple_repeat 2 47 0 2 1124 1261 76 6 6 chr13 70682054 70682225 -49602087 + B2_Mm2 SINE B2 4 174 -21 2 1124 498 323 66 36 chr13 70682313 70682689 -49601623 - L1MB5 LINE L1 -810 5336 4951 2 1124 981 104 0 0 chr13 70682689 70682833 -49601479 + (TTTC)n Simple_repeat Simple_repeat 4 147 0 2 1124 498 323 66 36 chr13 70682833 70683017 -49601295 - L1MB5 LINE L1 -1196 4950 4759 2 1124 238 308 2 22 chr13 70683185 70683277 -49601035 - L1M5 LINE L1 -463 5661 5569 2 1124 717 188 0 21 chr13 70684441 70684675 -49599637 + GA-rich Low_complexity Low_complexity 1 229 0 2 1124 240 86 0 0 chr13 70684675 70684710 -49599602 + (GA)n Simple_repeat Simple_repeat 1 35 0 2 1124 1145 62 7 7 chr13 70685648 70685794 -49598518 - B1_Mus1 SINE Alu -2 146 1 2 1124 301 312 9 52 chr13 70685819 70685934 -49598378 + B3 SINE B2 102 211 -5 2 1124 334 224 47 0 chr13 70687082 70687167 -49597145 - Lx8 LINE L1 -2 7471 7383 2 1124 230 270 116 68 chr13 70687477 70687545 -49596767 + L1MB5 LINE L1 5831 5909 -265 2 1124 216 0 0 0 chr13 70687545 70687569 -49596743 + (TA)n Simple_repeat Simple_repeat 2 25 0 2 1124 230 270 116 68 chr13 70687569 70687647 -49596665 + L1MB5 LINE L1 5910 5984 -190 2 1124 1119 216 72 75 chr13 70688898 70689139 -49595173 - ORR1D2 LTR MaLR -26 344 95 2 1124 1314 263 36 22 chr13 70689139 70689504 -49594808 + ORR1D2 LTR MaLR 1 370 0 2 1124 1119 216 72 75 chr13 70689504 70689607 -49594705 - ORR1D2 LTR MaLR -276 94 1 2 1124 626 304 92 52 chr13 70690236 70690507 -49593805 + B4A SINE B4 1 282 -10 2 1124 21 0 0 0 chr13 70690578 70690599 -49593713 + AT_rich Low_complexity Low_complexity 1 21 0 2 1124 440 325 58 102 chr13 70690665 70690960 -49593352 - ORR1E LTR MaLR -5 354 73 2 1124 704 323 146 57 chr13 70690959 70691723 -49592589 - ORR1E-int LTR MaLR -167 1203 476 2 1124 350 301 0 42 chr13 70691750 70691809 -49592503 - L1M2 LINE L1 -713 5578 5520 2 1124 3077 61 20 13 chr13 70691809 70692206 -49592106 + MTB LTR MaLR 1 400 0 2 1124 350 301 0 42 chr13 70692206 70692288 -49592024 - L1M2 LINE L1 -772 5519 5443 2 1124 1247 284 29 44 chr13 70692302 70692781 -49591531 - Lx8 LINE L1 -221 7252 6760 2 1124 743 104 0 9 chr13 70692998 70693114 -49591198 + (TC)n Simple_repeat Simple_repeat 2 116 0 2 1124 1628 164 68 38 chr13 70693135 70693502 -49590810 - Lx LINE L1 -6 6648 6271 2 1124 4379 131 74 45 chr13 70694357 70695141 -49589171 + Lx4B LINE L1 6007 6813 -245 2 1124 299 324 53 44 chr13 70695256 70695369 -49588943 + RSINE1 SINE B4 26 139 -26 2 1124 954 47 0 0 chr13 70695407 70695535 -49588777 + (CA)n Simple_repeat Simple_repeat 1 128 0 2 1124 50 18 0 0 chr13 70696276 70696333 -49587979 + AT_rich Low_complexity Low_complexity 1 57 0 2 1124 915 239 24 28 chr13 70697016 70697227 -49587085 - B3 SINE B2 0 216 7 2 1124 180 0 0 0 chr13 70697490 70697510 -49586802 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1124 673 276 49 43 chr13 70698554 70698876 -49585436 + MTE2b LTR MaLR 6 379 0 2 1124 634 318 131 33 chr13 70699535 70699932 -49584380 + MLT1C LTR MaLR 26 461 -6 2 1124 476 245 9 29 chr13 70700214 70700319 -49583993 + RSINE1 SINE B4 6 108 -57 2 1124 223 348 123 16 chr13 70701357 70701667 -49582645 - L2 LINE L2 -1146 2273 1931 2 1124 6372 154 99 16 chr13 70701717 70702477 -49581835 + RMER12 LTR ERVK 1 772 -550 2 1124 375 78 0 0 chr13 70702477 70702528 -49581784 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1124 6372 154 99 16 chr13 70702528 70702652 -49581660 + RMER12 LTR ERVK 773 896 -426 2 1124 444 91 0 0 chr13 70702652 70702718 -49581594 + (TG)n Simple_repeat Simple_repeat 2 67 0 2 1124 6372 154 99 16 chr13 70702718 70703025 -49581287 + RMER12 LTR ERVK 897 1291 -31 2 1124 1430 328 79 46 chr13 70703047 70703792 -49580520 - Lx8 LINE L1 -6 7467 6698 2 1124 771 278 66 62 chr13 70703828 70704170 -49580142 + RLTR12B LTR ERVK 19 307 -221 2 1124 513 290 68 6 chr13 70704223 70704386 -49579926 + RLTR12B LTR ERVK 347 519 -9 2 1124 252 178 0 62 chr13 70704400 70704448 -49579864 - Lx7 LINE L1 -1049 6647 6603 2 1124 194 393 36 0 chr13 70704454 70704594 -49579718 - L2 LINE L2 -1626 1793 1649 2 1124 226 373 97 5 chr13 70704765 70704951 -49579361 - L2 LINE L2 -2041 1378 1176 2 1124 188 34 0 33 chr13 70705017 70705047 -49579265 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1124 1169 44 0 0 chr13 70705047 70705183 -49579129 - B1_Mus2 SINE Alu -10 137 2 2 1124 613 221 31 0 chr13 70705916 70706043 -49578269 - B1F SINE Alu 0 149 19 2 1124 306 0 0 0 chr13 70706304 70706338 -49577974 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1124 794 271 5 15 chr13 70706398 70706593 -49577719 - B3 SINE B2 -19 197 5 2 1124 609 246 295 8 chr13 70706598 70706832 -49577480 + MTD LTR MaLR 105 405 -14 2 1124 243 308 53 32 chr13 70707792 70707886 -49576426 + MLT1G LTR MaLR 162 257 -322 2 1124 675 304 107 30 chr13 70707907 70708141 -49576171 + B4 SINE B4 14 265 -27 2 1124 251 230 9 0 chr13 70708192 70708305 -49576007 + (CA)n Simple_repeat Simple_repeat 2 115 0 2 1124 422 239 6 0 chr13 70708345 70708521 -49575791 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 1124 1229 47 0 0 chr13 70708554 70708702 -49575610 + B1_Mus1 SINE Alu 1 148 0 2 1124 270 136 0 0 chr13 70708702 70708746 -49575566 + (A)n Simple_repeat Simple_repeat 1 44 0 2 1124 392 324 99 46 chr13 70708800 70709062 -49575250 + MLT1G LTR MaLR 263 538 -53 2 1124 767 332 30 4 chr13 70712048 70712314 -49571998 + MTE-int LTR MaLR 1284 1556 -24 2 1124 355 366 99 53 chr13 70712321 70712624 -49571688 + ORR1E LTR MaLR 43 359 0 2 1124 691 251 72 11 chr13 70713635 70713816 -49570496 + MTD LTR MaLR 3 194 -225 2 1124 1565 204 62 45 chr13 70713827 70714228 -49570084 + RMER10A LTR ERVL 30 437 -5 2 1124 432 97 0 0 chr13 70714231 70714293 -49570019 + (TCCC)n Simple_repeat Simple_repeat 4 65 0 2 1124 1229 212 9 0 chr13 70714315 70714546 -49569766 + MTD LTR MaLR 186 418 -1 2 1124 244 250 37 9 chr13 70715115 70715224 -49569088 + (CAGA)n Simple_repeat Simple_repeat 4 115 0 2 1124 468 35 0 0 chr13 70715536 70715594 -49568718 + (CA)n Simple_repeat Simple_repeat 2 59 0 2 1124 255 103 0 0 chr13 70715610 70715649 -49568663 + (CAGA)n Simple_repeat Simple_repeat 1 39 0 2 1124 243 335 62 11 chr13 70715682 70715860 -49568452 - L1MEf LINE L1 -4535 1882 1696 2 1124 230 167 20 20 chr13 70716191 70716240 -49568072 - L1MEf LINE L1 -4867 1641 1593 2 1124 233 239 102 79 chr13 70716413 70716540 -49567772 - L1MEf LINE L1 -4865 1552 1423 2 1124 470 260 12 0 chr13 70716674 70716792 -49567520 - PB1D7 SINE Alu -22 127 4 2 1124 529 196 53 102 chr13 70716856 70717136 -49567176 + MTEa LTR MaLR 126 365 -14 2 1124 773 217 14 14 chr13 70717492 70717632 -49566680 + ETnERV2-int LTR ERVK 7063 7202 -204 2 1124 209 146 21 0 chr13 70718671 70718719 -49565593 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1124 258 276 111 28 chr13 70719105 70719213 -49565099 - PB1D10 SINE Alu 0 117 1 2 1124 465 233 101 0 chr13 70721032 70721161 -49563151 + B1F SINE Alu 1 142 -7 2 1124 198 71 0 0 chr13 70721859 70721887 -49562425 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1124 443 311 145 16 chr13 70722163 70722418 -49561894 + Lx8 LINE L1 6633 6920 -553 2 1124 403 293 140 12 chr13 70723020 70723352 -49560960 - L1MA6 LINE L1 -272 6019 5650 2 1124 348 324 58 0 chr13 70723479 70723618 -49560694 - L1MA6 LINE L1 -840 5457 5311 2 1124 1402 249 41 30 chr13 70723618 70723987 -49560325 + MTEa LTR MaLR 1 373 -6 2 1124 692 308 206 35 chr13 70724065 70725163 -49559149 - L1MA6 LINE L1 -926 5217 3933 2 1124 432 0 0 0 chr13 70726385 70726433 -49557879 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 2 1124 202 262 0 0 chr13 70726689 70726731 -49557581 + G-rich Low_complexity Low_complexity 4 45 0 2 1124 21 0 0 0 chr13 70727584 70727605 -49556707 + AT_rich Low_complexity Low_complexity 1 21 0 2 1124 22 35 0 0 chr13 70729853 70729882 -49554430 + AT_rich Low_complexity Low_complexity 1 29 0 2 1124 488 189 16 112 chr13 70731049 70731174 -49553138 - MTC LTR MaLR -308 113 1 2 1124 2112 157 97 23 chr13 70731810 70732200 -49552112 + MTC LTR MaLR 3 421 0 2 1124 293 313 184 17 chr13 70732669 70732903 -49551409 + Charlie1a DNA MER1_type 774 1046 -409 3 1124 225 188 0 59 chr13 70733368 70733419 -49550893 + MLT1F-int LTR MaLR 619 666 -823 3 1124 311 215 15 15 chr13 70735717 70735783 -49548529 - L1MEg LINE L1 -4132 1952 1887 3 1124 195 69 0 0 chr13 70736498 70736527 -49547785 + (G)n Simple_repeat Simple_repeat 1 29 0 3 1124 702 191 50 0 chr13 70736836 70736977 -49547335 - B1_Mur3 SINE Alu 0 149 2 3 1124 569 247 58 26 chr13 70737595 70737749 -49546563 + RSINE1 SINE B4 5 163 -2 3 1124 284 240 232 30 chr13 70738260 70738359 -49545953 - PB1D7 SINE Alu -1 119 1 3 1124 239 227 91 0 chr13 70748825 70748913 -49535399 + L1MC4a LINE L1 7075 7170 -712 3 1124 1122 139 118 10 chr13 70749681 70749884 -49534428 - URR1B DNA MER1_type 0 225 1 3 1124 1254 168 22 39 chr13 70752990 70753219 -49531093 - URR1B DNA MER1_type 0 225 1 3 1124 342 298 72 102 chr13 70753219 70753262 -49531050 + CYRA11_Mm Unknown Y-chromosome 398 432 -185 3 1124 1906 208 65 5 chr13 70755297 70755679 -49528633 + MTC LTR MaLR 17 421 0 3 1124 4902 115 22 38 chr13 70756354 70757176 -49527136 - RMER17D2 LTR ERVK 0 809 1 3 1124 606 93 0 0 chr13 70757637 70757723 -49526589 + (GGGGA)n Simple_repeat Simple_repeat 3 88 0 3 1124 507 194 0 0 chr13 70757722 70757825 -49526487 + GA-rich Low_complexity Low_complexity 1 103 0 3 1124 1577 186 38 135 chr13 70760514 70760716 -49523596 + ORR1C2 LTR MaLR 4 181 -203 3 1124 1236 41 0 7 chr13 70760716 70760864 -49523448 + B1_Mus2 SINE Alu 1 147 0 3 1124 1577 186 38 135 chr13 70760864 70760876 -49523436 + ORR1C2 LTR MaLR 182 182 -202 3 1124 315 0 0 0 chr13 70760876 70760911 -49523401 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1124 1577 186 38 135 chr13 70760911 70760922 -49523390 + ORR1C2 LTR MaLR 182 184 -200 3 1124 511 104 10 20 chr13 70760922 70761020 -49523292 + (TCTA)n Simple_repeat Simple_repeat 3 99 0 3 1124 1577 186 38 135 chr13 70761020 70761214 -49523098 + ORR1C2 LTR MaLR 185 384 0 3 1124 541 286 96 17 chr13 70761710 70761888 -49522424 + B3A SINE B2 1 192 -6 3 1124 637 128 16 8 chr13 70763569 70763695 -49520617 + L1_Mus4 LINE L1 6505 6631 -5 3 1124 344 314 32 13 chr13 70764402 70764557 -49519755 - RSINE1 SINE B4 -6 159 2 3 1124 14872 86 38 38 chr13 70765344 70768642 -49515670 + L1VL4 LINE L1 553 3834 -80 3 1124 7823 63 26 6 chr13 70768648 70769671 -49514641 + L1_Mus3 LINE L1 5588 6631 -7 3 1124 304 122 35 47 chr13 70769673 70769759 -49514553 + L1VL4 LINE L1 3830 3914 0 3 1124 324 327 39 0 chr13 70770731 70770887 -49513425 + L1M4 LINE L1 5611 5772 -412 3 1124 535 276 88 6 chr13 70771507 70771689 -49512623 + MTEb LTR MaLR 178 374 -5 3 1124 286 257 87 110 chr13 70771702 70771829 -49512483 + ID_B1 SINE B4 81 204 -20 3 1124 1326 170 5 0 chr13 70772276 70772500 -49511812 + URR1B DNA MER1_type 1 225 0 3 1124 305 261 110 15 chr13 70774358 70774494 -49509818 + MER58B DNA MER1_type 189 337 -4 3 1124 268 295 138 66 chr13 70774817 70775013 -49509299 + L2 LINE L2 2834 3043 -376 3 1124 3130 104 2 62 chr13 70777413 70777782 -49506530 - MT2C_Mm LTR ERVL -2 473 126 3 1124 1587 37 5 0 chr13 70777782 70777969 -49506343 + B2_Mm1t SINE B2 1 188 -5 3 1124 3130 104 2 62 chr13 70777969 70778102 -49506210 - MT2C_Mm LTR ERVL -350 125 1 3 140 471 18 0 0 chr13 70778876 70778932 -49505380 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1125 243 122 0 0 chr13 70778932 70778980 -49505332 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1125 822 125 21 42 chr13 70779551 70779693 -49504619 - B1_Mur3 SINE Alu -1 148 10 3 1125 235 246 28 28 chr13 70780135 70780206 -49504106 + MLT1A LTR MaLR 304 374 0 3 1125 304 347 46 70 chr13 70780402 70780622 -49503690 + MTE-int LTR MaLR 307 485 -1250 3 1125 270 0 0 0 chr13 70781502 70781532 -49502780 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1125 220 250 36 84 chr13 70781925 70782008 -49502304 + B4 SINE B4 2 80 -212 3 1125 464 236 14 16 chr13 70781974 70782094 -49502218 - B3 SINE B2 -72 121 3 3 1125 273 57 0 0 chr13 70782113 70782148 -49502164 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1125 1172 106 0 0 chr13 70782148 70782308 -49502004 - B2_Mm2 SINE B2 -35 160 1 3 1125 621 309 36 25 chr13 70782321 70782343 -49501969 + B4 SINE B4 66 87 -205 3 1125 267 31 0 0 chr13 70782343 70782375 -49501937 + (CAAG)n Simple_repeat Simple_repeat 4 35 0 3 1125 621 309 36 25 chr13 70782375 70782548 -49501764 + B4 SINE B4 88 262 -30 3 1125 2261 254 44 97 chr13 70784203 70785037 -49499275 + Lx9 LINE L1 6678 7467 -177 3 1125 188 262 79 32 chr13 70786467 70786530 -49497782 - MIRc SINE MIR -142 126 61 3 1125 2725 83 5 32 chr13 70788111 70788511 -49495801 + L1_Mus3 LINE L1 6249 6637 -1 3 1125 380 303 113 36 chr13 70788850 70789228 -49495084 + L2a LINE L2 2962 3421 -5 3 1125 691 283 142 52 chr13 70789404 70789959 -49494353 + L1MC1 LINE L1 5723 6327 -6 3 1125 3024 90 2 24 chr13 70790258 70790667 -49493645 + MTB LTR MaLR 1 400 0 3 1125 1027 148 12 0 chr13 70790732 70790901 -49493411 + B2_Mm1t SINE B2 1 171 -22 3 1125 360 294 61 61 chr13 70791210 70791373 -49492939 - RSINE1 SINE B4 0 165 3 3 1125 243 299 62 42 chr13 70792182 70792374 -49491938 + L1MA5 LINE L1 6105 6300 0 3 1125 339 130 0 0 chr13 70795736 70795790 -49488522 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1125 497 240 22 74 chr13 70796174 70796309 -49488003 + B1F SINE Alu 3 130 -19 3 1125 264 302 83 16 chr13 70796760 70796881 -49487431 + MER110A LTR ERV1 1 129 -339 3 1125 203 171 0 0 chr13 70796881 70796916 -49487396 + A-rich Low_complexity Low_complexity 2 36 0 3 1125 305 310 48 77 chr13 70796982 70797150 -49487162 + MER110A LTR ERV1 267 429 -39 3 1125 925 168 0 0 chr13 70797310 70797453 -49486859 + B1_Mur2 SINE Alu 3 145 -4 3 1125 522 0 0 0 chr13 70797457 70797515 -49486797 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 1125 508 58 28 46 chr13 70797538 70797646 -49486666 + (TAGA)n Simple_repeat Simple_repeat 3 108 0 3 1125 3330 26 13 8 chr13 70797653 70798046 -49486266 - MTA_Mm LTR MaLR 0 396 2 3 1125 1034 91 4 18 chr13 70798046 70798325 -49485987 + (TAGA)n Simple_repeat Simple_repeat 1 275 0 3 1125 303 273 132 72 chr13 70798459 70798625 -49485687 + MLT1D LTR MaLR 70 245 -260 3 1125 1027 213 0 46 chr13 70799821 70800079 -49484233 + ORR1B1 LTR MaLR 1 208 -186 3 1125 9186 126 25 19 chr13 70800084 70802518 -49481794 - L1_Mus4 LINE L1 0 6636 4186 3 1125 502 301 49 0 chr13 70802518 70802641 -49481671 + ETnERV2-int LTR ERVK 7074 7202 -204 3 1125 17487 142 4 10 chr13 70803022 70805750 -49478562 - L1VL4 LINE L1 -1684 4199 1486 3 1125 2486 105 0 0 chr13 70805750 70806082 -49478230 - IAPEY3_LTR LTR ERVK 0 332 1 3 1125 17487 152 15 11 chr13 70806082 70806865 -49477447 - L1VL4 LINE L1 -4398 1485 492 3 1125 1122 183 0 0 chr13 70806899 70807085 -49477227 + ORR1B1 LTR MaLR 209 394 0 3 1125 3109 43 67 0 chr13 70807142 70807513 -49476799 - MTA_Mm LTR MaLR 0 396 1 3 1125 366 355 37 37 chr13 70808040 70808286 -49476026 - MLT1E3 LTR MaLR 0 624 379 3 1125 395 353 48 5 chr13 70808332 70808520 -49475792 - MLT1E3 LTR MaLR -361 263 68 3 1125 1871 139 43 78 chr13 70810125 70810336 -49473976 + RMER17C LTR ERVK 1 179 -231 3 1125 1243 58 0 17 chr13 70810336 70810511 -49473801 + (TTCTC)n Simple_repeat Simple_repeat 5 176 0 3 1125 1871 139 43 78 chr13 70810511 70810721 -49473591 + RMER17C LTR ERVK 180 406 -4 3 1125 228 313 93 58 chr13 70811078 70811217 -49473095 + L2 LINE L2 2783 2926 -493 3 1125 547 224 151 80 chr13 70811485 70811583 -49472729 + MTEa LTR MaLR 3 124 -255 3 1125 414 0 0 0 chr13 70811583 70811629 -49472683 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1125 547 224 151 80 chr13 70811629 70811729 -49472583 + MTEa LTR MaLR 125 215 -164 3 1125 737 83 18 0 chr13 70811729 70811838 -49472474 + (TTCC)n Simple_repeat Simple_repeat 3 113 0 3 1125 242 250 15 15 chr13 70811838 70811903 -49472409 + MTEa LTR MaLR 315 379 0 3 1125 523 312 152 23 chr13 70812462 70812718 -49471594 - MLT1A1 LTR MaLR 0 408 120 3 1125 561 311 96 61 chr13 70812729 70813092 -49471220 - MTEa LTR MaLR 0 379 4 3 1125 244 329 104 17 chr13 70813104 70813277 -49471035 + Lx8 LINE L1 7278 7465 -8 3 1125 691 202 17 35 chr13 70813348 70813522 -49470790 - RMER10A LTR ERVL 0 442 272 3 1125 689 125 25 0 chr13 70813525 70813645 -49470667 + Lx2 LINE L1 6869 6991 -6 3 1125 946 311 211 8 chr13 70816203 70816512 -49467800 + MER44C DNA MER2_type 36 396 -337 3 1125 423 0 0 0 chr13 70816512 70816559 -49467753 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1125 946 266 194 66 chr13 70816559 70816806 -49467506 + MER44C DNA MER2_type 397 712 -21 3 1125 350 282 0 11 chr13 70817482 70817658 -49466654 + (CATATA)n Simple_repeat Simple_repeat 3 176 0 3 1125 220 179 0 0 chr13 70817658 70817697 -49466615 + (CAGA)n Simple_repeat Simple_repeat 1 39 0 3 1125 320 271 206 67 chr13 70818030 70818224 -49466088 - B4A SINE B4 -67 225 5 3 1125 585 42 0 0 chr13 70820167 70820239 -49464073 + (GA)n Simple_repeat Simple_repeat 2 73 0 3 1125 509 282 109 47 chr13 70820805 70821111 -49463201 - MER31A LTR ERV1 -163 322 21 3 1125 289 259 0 105 chr13 70821669 70821764 -49462548 - B3A SINE B2 0 198 114 3 1125 717 271 27 55 chr13 70822057 70822171 -49462141 + B3 SINE B2 1 116 -100 3 1125 2868 78 47 0 chr13 70822171 70822553 -49461759 - MTB LTR MaLR 0 400 1 3 1125 717 271 27 55 chr13 70822553 70822657 -49461655 + B3 SINE B2 117 213 -3 3 1125 216 67 0 0 chr13 70822779 70822809 -49461503 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1125 513 131 0 0 chr13 70822839 70822923 -49461389 + (GA)n Simple_repeat Simple_repeat 1 84 0 3 1125 531 67 34 0 chr13 70823215 70823304 -49461008 + (TC)n Simple_repeat Simple_repeat 1 92 0 3 1125 234 223 147 57 chr13 70823498 70823655 -49460657 + Lx8 LINE L1 7303 7473 0 3 1125 435 38 0 0 chr13 70824455 70824508 -49459804 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1125 474 18 0 0 chr13 70824508 70824562 -49459750 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 1125 262 253 62 62 chr13 70824941 70825021 -49459291 + MER5A DNA MER1_type 5 84 -105 3 1125 757 299 14 24 chr13 70826213 70826422 -49457890 + ID_B1 SINE B4 15 221 -3 3 1125 1005 301 136 14 chr13 70826450 70826891 -49457421 - RMER5 LTR ERV1 0 534 40 3 1125 898 285 88 22 chr13 70829001 70829274 -49455038 + B4A SINE B4 2 292 0 4 1125 742 113 8 8 chr13 70829783 70829908 -49454404 + (TC)n Simple_repeat Simple_repeat 2 126 0 4 1125 426 212 0 0 chr13 70830796 70830895 -49453417 + GA-rich Low_complexity Low_complexity 1 99 0 4 1125 1806 189 80 26 chr13 70831400 70831790 -49452522 + MTD LTR MaLR 8 418 -1 4 1125 2082 197 82 62 chr13 70832477 70832975 -49451337 + RLTR18B LTR ERVK 1 508 -4 4 1125 1566 62 0 0 chr13 70833460 70833652 -49450660 - B2_Mm1a SINE B2 0 193 2 4 1125 947 225 103 143 chr13 70834723 70835262 -49449050 - Lx7 LINE L1 -6 7690 7200 4 1125 2040 219 24 82 chr13 70835266 70835853 -49448459 + RLTR31_Mur LTR ERVK 1 553 0 4 1125 2067 201 17 17 chr13 70835853 70836267 -49448045 - Lx7 LINE L1 -495 7201 6788 4 1125 2111 222 5 17 chr13 70836263 70836671 -49447641 - Lx7 LINE L1 -1027 6669 6267 4 1125 281 287 21 21 chr13 70836705 70836801 -49447511 - Lx3C LINE L1 -598 6378 6283 4 1125 507 267 56 25 chr13 70836815 70837011 -49447301 - MTE2b LTR MaLR -218 203 5 4 1125 1580 246 24 29 chr13 70837862 70838243 -49446069 + MTEb LTR MaLR 1 379 0 4 1125 228 288 17 0 chr13 70838488 70838547 -49445765 + L1MD LINE L1 4961 5020 -1126 4 1125 646 338 6 19 chr13 70838563 70838723 -49445589 + RSINE1 SINE B4 5 162 -3 4 1125 396 364 29 61 chr13 70838734 70839047 -49445265 + L1MD LINE L1 5000 5302 -844 4 1125 433 184 29 0 chr13 70839893 70839996 -49444316 - Lx9 LINE L1 -22 7622 7517 4 1125 243 0 0 0 chr13 70839996 70840023 -49444289 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1125 471 90 0 0 chr13 70840023 70840101 -49444211 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1125 445 190 0 71 chr13 70840127 70840212 -49444100 - 5S rRNA rRNA -16 105 27 4 1125 1091 40 20 7 chr13 70840686 70840838 -49443474 + L1Md_F3 LINE L1 6431 6584 0 4 1125 315 104 0 0 chr13 70841089 70841137 -49443175 + (TCCCC)n Simple_repeat Simple_repeat 4 51 0 4 1125 714 94 46 29 chr13 70841236 70841411 -49442901 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 4 1125 552 138 60 37 chr13 70841427 70841728 -49442584 + (TCTA)n Simple_repeat Simple_repeat 1 308 0 4 1125 285 291 42 56 chr13 70842799 70842941 -49441371 - MLT1B LTR MaLR -201 189 50 4 1125 945 67 0 0 chr13 70843192 70843326 -49440986 + (TG)n Simple_repeat Simple_repeat 2 135 0 4 1125 651 248 245 0 chr13 70844070 70844307 -49440005 + MTE2b LTR MaLR 83 377 -2 4 1125 1717 214 138 13 chr13 70844360 70844838 -49439474 + Lx9 LINE L1 7099 7636 -8 4 1125 1857 157 76 0 chr13 70844839 70845183 -49439129 - Lx9 LINE L1 -141 7503 7134 4 1125 267 222 40 36 chr13 70845788 70845872 -49438440 - MLT1A0 LTR MaLR -46 421 273 4 1125 544 338 51 9 chr13 70846345 70846560 -49437752 - MLT1A0 LTR MaLR -130 235 12 4 1125 247 169 0 101 chr13 70847719 70847798 -49436514 + C-rich Low_complexity Low_complexity 6 76 0 4 1125 380 291 63 24 chr13 70847831 70848084 -49436228 - Lx9 LINE L1 -135 7509 7247 4 1125 344 318 98 0 chr13 70848085 70848217 -49436095 - MTEa LTR MaLR -230 149 5 4 1125 351 299 68 56 chr13 70848835 70849101 -49435211 + L1M4 LINE L1 5032 5300 -846 4 1125 703 247 58 0 chr13 70849203 70849377 -49434935 + Lx6 LINE L1 7265 7448 -12 4 1125 469 246 135 32 chr13 70849485 70849737 -49434575 + L1M4 LINE L1 5501 5778 -402 4 1125 495 253 163 0 chr13 70849799 70849989 -49434323 + L1MB7 LINE L1 5886 6106 -78 4 1125 835 262 140 41 chr13 70850216 70850448 -49433864 + Lx9 LINE L1 6687 6951 -693 4 1125 261 0 0 0 chr13 70850448 70850477 -49433835 + (TC)n Simple_repeat Simple_repeat 2 30 0 4 1125 261 0 0 0 chr13 70850477 70850505 -49433807 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 1125 835 277 148 42 chr13 70850505 70850637 -49433675 + Lx9 LINE L1 6809 7031 -613 4 1125 299 242 99 0 chr13 70851240 70851331 -49432981 - MER74B LTR ERVL -439 183 84 4 1125 724 101 17 8 chr13 70851492 70851612 -49432700 + (TTCC)n Simple_repeat Simple_repeat 1 121 0 4 1125 795 170 12 12 chr13 70851681 70851854 -49432458 + CT-rich Low_complexity Low_complexity 4 176 0 4 1125 750 226 65 5 chr13 70851854 70852054 -49432258 - B3 SINE B2 -4 212 1 4 1125 650 265 151 58 chr13 70853416 70853860 -49430452 - L1M4 LINE L1 -594 5739 5258 4 1125 522 350 20 44 chr13 70853901 70854152 -49430160 - Tigger5 DNA MER2_type -10 2396 2152 4 1125 678 287 98 4 chr13 70856300 70856555 -49427757 - B4 SINE B4 -12 280 2 4 1125 399 217 0 46 chr13 70856906 70856993 -49427319 - B1_Mur2 SINE Alu -8 141 59 4 1125 543 322 148 30 chr13 70857213 70857511 -49426801 - MLT1B LTR MaLR -42 348 16 4 1125 329 246 86 124 chr13 70858644 70858830 -49425482 + B2_Mm2 SINE B2 9 187 -8 4 1125 315 159 39 50 chr13 70860448 70860627 -49423685 + (TAGA)n Simple_repeat Simple_repeat 4 180 0 4 1125 958 300 122 51 chr13 70860701 70861129 -49423183 - MLT2B2 LTR ERVL -48 467 10 4 1125 1562 223 77 9 chr13 70862138 70862477 -49421835 + ORR1D2 LTR MaLR 1 362 -8 4 1125 222 37 0 0 chr13 70864492 70864519 -49419793 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1125 562 290 53 34 chr13 70865821 70866028 -49418284 + MLT2D LTR ERVL 6 216 -198 4 1125 616 327 34 10 chr13 70866039 70866243 -49418069 + ID_B1 SINE B4 5 213 -11 4 1125 295 316 109 55 chr13 70866226 70866427 -49417885 + MLT2D LTR ERVL 245 456 -8 4 1125 21 0 0 0 chr13 70866693 70866714 -49417598 + AT_rich Low_complexity Low_complexity 1 21 0 4 1125 853 272 61 103 chr13 70867975 70868335 -49415977 + ORR1E LTR MaLR 2 346 -13 4 1125 538 138 48 24 chr13 70871366 70871492 -49412820 + Lx4B LINE L1 6922 7050 -8 4 1125 193 365 18 36 chr13 70871633 70871744 -49412568 - L2b LINE L2 0 3375 3267 4 1125 236 254 34 0 chr13 70873481 70873540 -49410772 + ORR1E LTR MaLR 91 151 -208 4 1125 874 162 14 0 chr13 70873934 70874082 -49410230 - URR1B DNA MER1_type 0 225 76 4 1125 296 181 12 0 chr13 70875789 70875872 -49408440 + (TG)n Simple_repeat Simple_repeat 1 84 0 4 1125 767 101 0 8 chr13 70876313 70876433 -49407879 + (TTTTC)n Simple_repeat Simple_repeat 3 121 0 4 1125 288 53 0 0 chr13 70876458 70876496 -49407816 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 4 1125 1201 72 0 0 chr13 70876496 70876649 -49407663 - B2_Mm2 SINE B2 -42 153 1 4 1125 206 220 0 17 chr13 70876659 70876719 -49407593 + CT-rich Low_complexity Low_complexity 2 60 0 4 1125 180 152 0 0 chr13 70876721 70876754 -49407558 + GA-rich Low_complexity Low_complexity 3 35 0 4 1125 217 54 0 119 chr13 70876755 70876797 -49407515 - B1_Mm SINE Alu -18 129 93 4 1125 35 78 0 0 chr13 70878111 70878188 -49406124 + AT_rich Low_complexity Low_complexity 1 77 0 4 1125 279 0 0 0 chr13 70878401 70878432 -49405880 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1125 180 0 0 0 chr13 70878660 70878680 -49405632 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1125 514 283 54 98 chr13 70880277 70880645 -49403667 + ORR1E LTR MaLR 8 359 0 4 1125 757 287 38 4 chr13 70883421 70883659 -49400653 + Tigger13a DNA MER2_type 205 450 -321 4 1125 234 0 0 0 chr13 70884195 70884221 -49400091 + (TAA)n Simple_repeat Simple_repeat 2 27 0 4 1125 282 137 13 40 chr13 70885905 70885933 -49398379 + polypyrimidine Low_complexity Low_complexity 50 75 0 4 1125 1013 145 0 6 chr13 70885933 70886113 -49398199 + CT-rich Low_complexity Low_complexity 1 179 0 4 1125 282 137 13 40 chr13 70886113 70886160 -49398152 + polypyrimidine Low_complexity Low_complexity 3 49 0 4 1125 362 123 0 17 chr13 70886300 70886358 -49397954 + ORR1C1 LTR MaLR 8 64 -314 4 1125 186 246 88 0 chr13 70886375 70886432 -49397880 + L2 LINE L2 2609 2670 -749 4 1125 796 258 39 49 chr13 70888681 70888966 -49395346 - ORR1E LTR MaLR -3 356 75 4 1125 255 130 0 0 chr13 70888966 70889020 -49395292 + (A)n Simple_repeat Simple_repeat 1 54 0 4 1125 278 186 56 14 chr13 70890350 70890421 -49393891 + MER67A LTR ERV1 1 74 -469 4 1125 12480 221 35 6 chr13 70894993 70897506 -49386806 - ERVL-B4-int LTR ERVL -1298 4416 1829 4 1125 2043 176 54 11 chr13 70897506 70897973 -49386339 + ORR1A4-int LTR MaLR 920 1482 -27 4 1125 1949 145 0 66 chr13 70897974 70898322 -49385990 + ORR1A4 LTR MaLR 5 329 0 4 1125 460 318 5 65 chr13 70899255 70899440 -49384872 + B3A SINE B2 2 175 -23 4 1125 423 0 0 0 chr13 70899441 70899488 -49384824 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1125 22 56 0 0 chr13 70900186 70900222 -49384090 + AT_rich Low_complexity Low_complexity 1 36 0 4 1125 583 320 71 13 chr13 70901039 70901264 -49383048 + Lx8 LINE L1 6416 6653 -820 4 1125 306 194 0 0 chr13 70901317 70901379 -49382933 + GA-rich Low_complexity Low_complexity 3 64 0 4 1125 183 114 0 0 chr13 70901379 70901414 -49382898 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 4 1125 386 303 132 6 chr13 70901545 70901711 -49382601 + MTE2a LTR MaLR 186 372 -7 4 1125 309 19 56 19 chr13 70903040 70903094 -49381218 + (TTTTTG)n Simple_repeat Simple_repeat 4 59 0 4 1125 390 299 108 65 chr13 70903133 70903530 -49380782 + L1MA5A LINE L1 2268 2681 -3462 4 1125 1155 297 84 14 chr13 70903555 70904201 -49380111 + L1MA5A LINE L1 4300 4990 -1153 4 1125 779 129 0 8 chr13 70904202 70904335 -49379977 + (GAAA)n Simple_repeat Simple_repeat 3 134 0 4 1125 416 250 25 20 chr13 70904571 70904733 -49379579 + Lx7 LINE L1 7536 7680 -16 4 1125 825 320 70 45 chr13 70904822 70905478 -49378834 + L1MA5A LINE L1 5220 5932 -365 4 1125 1136 113 33 7 chr13 70905943 70906219 -49378093 + (TCTA)n Simple_repeat Simple_repeat 1 282 0 4 1125 256 296 79 51 chr13 70907137 70907148 -49377164 + CYRA11_Mm Unknown Y-chromosome 161 249 -368 4 1125 891 203 5 16 chr13 70907148 70907338 -49376974 - URR1B DNA MER1_type 0 225 38 4 1125 256 296 79 51 chr13 70907338 70907351 -49376961 + CYRA11_Mm Unknown Y-chromosome 250 380 -237 4 1125 186 255 0 0 chr13 70908969 70909016 -49375296 + L2a LINE L2 3378 3424 -2 4 1125 385 226 19 19 chr13 70909296 70909400 -49374912 - B1_Mur2 SINE Alu 0 149 46 4 1125 205 138 0 0 chr13 70909465 70909494 -49374818 + (CAT)n Simple_repeat Simple_repeat 2 30 0 4 1125 194 244 0 0 chr13 70909554 70909595 -49374717 + MIRm SINE MIR 234 274 -2 4 1126 21 36 0 0 chr13 70911913 70911941 -49372371 + AT_rich Low_complexity Low_complexity 1 28 0 4 1126 3151 316 80 39 chr13 70912914 70913119 -49371193 + Lx9 LINE L1 5995 6338 -1306 4 1126 207 0 0 0 chr13 70913119 70913142 -49371170 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1126 3151 271 92 33 chr13 70913142 70914245 -49370067 + Lx9 LINE L1 6339 7514 -130 4 1126 372 43 0 0 chr13 70914245 70914291 -49370021 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1126 3151 271 92 33 chr13 70914291 70914415 -49369897 + Lx9 LINE L1 7515 7644 0 4 1126 348 64 0 0 chr13 70915739 70915786 -49368526 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1126 348 127 0 0 chr13 70915790 70915845 -49368467 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1126 889 157 94 36 chr13 70915858 70916050 -49368262 - Lx3B LINE L1 -2 6971 6769 5 1126 282 340 40 0 chr13 70916751 70916851 -49367461 - PB1 SINE Alu -2 125 22 5 1126 222 220 0 0 chr13 70916945 70917004 -49367308 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 5 1126 197 234 20 41 chr13 70918263 70918312 -49366000 + L2b LINE L2 3311 3358 -17 5 1126 228 207 19 26 chr13 70918948 70919103 -49365209 + CT-rich Low_complexity Low_complexity 1 153 0 5 1126 1424 296 121 63 chr13 70920004 70920323 -49363989 + L1MC LINE L1 3546 3861 -2285 5 1126 685 240 153 22 chr13 70920323 70920506 -49363806 + B3 SINE B2 4 210 -6 5 1126 1424 296 121 63 chr13 70920506 70921456 -49362856 + L1MC LINE L1 3862 4878 -1268 5 1126 1921 39 84 55 chr13 70921456 70921730 -49362582 + L1_Mus1 LINE L1 6286 6567 0 5 1126 1424 296 121 63 chr13 70921730 70921782 -49362530 + L1MC LINE L1 4879 4944 -1202 5 1126 1031 289 88 56 chr13 70924101 70924439 -49359873 + Lx8 LINE L1 6817 7167 -306 5 1126 3632 13 0 0 chr13 70924439 70924835 -49359477 + MTA_Mm LTR MaLR 1 396 0 5 1126 1031 289 88 56 chr13 70924835 70924999 -49359313 + Lx8 LINE L1 7168 7335 -138 5 1126 654 49 0 0 chr13 70925003 70925085 -49359227 + (CCA)n Simple_repeat Simple_repeat 1 82 0 5 1126 284 335 83 83 chr13 70925119 70925396 -49358916 + B4A SINE B4 2 278 -14 5 1126 460 141 11 73 chr13 70925469 70925660 -49358652 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 5 1126 326 317 137 0 chr13 70926327 70926532 -49357780 - Lx9 LINE L1 -215 7429 7197 5 1126 401 214 78 78 chr13 70926532 70926699 -49357613 + Lx9 LINE L1 7430 7596 -48 5 1126 21 36 0 0 chr13 70926729 70926757 -49357555 + AT_rich Low_complexity Low_complexity 1 28 0 5 1126 180 0 0 0 chr13 70926808 70926828 -49357484 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 5 1126 198 300 17 0 chr13 70928940 70929000 -49355312 + MIRc SINE MIR 83 143 -125 5 1126 183 162 0 0 chr13 70930273 70930310 -49354002 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1126 367 360 160 6 chr13 70931158 70931471 -49352841 - MER68 LTR ERVL -198 365 5 5 1126 315 0 0 0 chr13 70932448 70932483 -49351829 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1126 261 0 0 0 chr13 70932483 70932511 -49351801 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 1126 360 0 0 0 chr13 70933923 70933963 -49350349 + (TC)n Simple_repeat Simple_repeat 1 40 0 5 1126 290 26 26 0 chr13 70933963 70934001 -49350311 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1126 213 100 19 39 chr13 70934092 70934144 -49350168 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1126 209 33 33 0 chr13 70934414 70934444 -49349868 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1126 306 106 0 0 chr13 70934696 70934743 -49349569 + (TCC)n Simple_repeat Simple_repeat 2 48 0 5 1126 957 131 0 0 chr13 70934754 70934907 -49349405 + (CAT)n Simple_repeat Simple_repeat 1 153 0 5 1126 218 289 13 0 chr13 70936290 70936366 -49347946 + (CATATA)n Simple_repeat Simple_repeat 6 82 0 5 1126 230 245 10 0 chr13 70936385 70936483 -49347829 + (CA)n Simple_repeat Simple_repeat 2 100 0 5 1126 576 222 0 0 chr13 70936525 70936705 -49347607 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1126 240 321 24 0 chr13 70940526 70940610 -49343702 + L1MC LINE L1 5433 5518 -2364 5 1126 825 272 82 87 chr13 70940763 70941396 -49342916 + L1M2 LINE L1 3764 4393 -1750 5 1126 2130 153 171 44 chr13 70942302 70942821 -49341491 - RMER4B LTR ERVK 0 585 1 5 1126 1238 234 177 52 chr13 70946726 70947230 -49337082 + RMER2 LTR ERV1 1 567 0 5 1126 1099 184 36 9 chr13 70947742 70947961 -49336351 + URR1B DNA MER1_type 1 225 0 5 1126 28367 101 65 10 chr13 70947971 70950049 -49334263 - L1Md_F LINE L1 -103 5780 3485 5 1126 453 36 0 0 chr13 70950049 70950104 -49334208 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 5 1126 28367 101 65 10 chr13 70950104 70950791 -49333521 - L1Md_F LINE L1 -2399 3484 2818 5 1126 1164 62 7 0 chr13 70950791 70950936 -49333376 - B1_Mm SINE Alu 0 147 2 5 1126 28367 119 58 8 chr13 70950936 70953346 -49330966 - L1Md_F LINE L1 -3066 2817 330 5 1126 1240 235 102 0 chr13 70953350 70953673 -49330639 - MTD LTR MaLR -63 356 1 5 1126 410 169 0 0 chr13 70955653 70955718 -49328594 - ID4_ SINE ID -17 66 2 5 1126 2373 108 12 6 chr13 70955963 70956308 -49328004 - Lx2 LINE L1 0 6997 6651 5 1126 594 311 32 43 chr13 70958631 70958819 -49325493 + B3 SINE B2 1 186 -30 5 1126 607 201 6 6 chr13 70961569 70961734 -49322578 + (TG)n Simple_repeat Simple_repeat 1 165 0 5 1126 354 215 0 0 chr13 70962011 70962090 -49322222 + CT-rich Low_complexity Low_complexity 4 82 0 5 1126 652 300 20 49 chr13 70962428 70962673 -49321639 + MTEa LTR MaLR 3 240 -139 5 1126 406 324 96 52 chr13 70965114 70965365 -49318947 + MTE2a LTR MaLR 112 373 -6 5 1126 226 233 43 65 chr13 70965882 70965896 -49318416 - PB1D7 SINE Alu 0 120 111 5 1126 216 0 0 0 chr13 70965896 70965920 -49318392 + (TTG)n Simple_repeat Simple_repeat 2 25 0 5 1126 289 174 34 25 chr13 70965920 70965997 -49318315 - B1_Mur4 SINE Alu -10 110 31 5 1126 23 33 0 0 chr13 70966079 70966109 -49318203 + AT_rich Low_complexity Low_complexity 1 30 0 5 1126 243 61 0 0 chr13 70966325 70966358 -49317954 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1126 248 0 31 0 chr13 70967564 70967596 -49316716 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1126 1740 128 22 22 chr13 70968432 70968752 -49315560 + RLTR15 LTR ERVK 1 320 -39 5 1126 3397 183 62 116 chr13 70968865 70969830 -49314482 + Lx9 LINE L1 6731 7643 -1 5 1126 207 0 0 0 chr13 70970380 70970403 -49313909 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1126 556 118 0 110 chr13 70970804 70971004 -49313308 + C-rich Low_complexity Low_complexity 3 180 0 5 1126 251 264 0 0 chr13 70971005 70971058 -49313254 + CT-rich Low_complexity Low_complexity 4 56 0 5 1126 572 78 78 0 chr13 70971145 70971235 -49313077 - BC1_Mm scRNA scRNA -55 97 1 5 1126 21 57 0 0 chr13 70971256 70971291 -49313021 + AT_rich Low_complexity Low_complexity 1 35 0 5 1126 1937 190 93 3 chr13 70972415 70972801 -49311511 - MTC LTR MaLR 0 421 1 5 1126 315 0 0 0 chr13 70973814 70973849 -49310463 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1126 1181 298 27 14 chr13 70973952 70974319 -49309993 + MTE2b LTR MaLR 2 373 -6 5 1126 684 0 0 0 chr13 70977079 70977155 -49307157 + (TC)n Simple_repeat Simple_repeat 2 77 0 5 1126 266 227 53 0 chr13 70977742 70977817 -49306495 + L1M2 LINE L1 5700 5778 -513 5 1126 210 105 0 0 chr13 70977840 70977878 -49306434 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1126 211 151 94 0 chr13 70978959 70979012 -49305300 + RSINE1 SINE B4 100 157 -8 5 1126 403 287 20 13 chr13 70980660 70980812 -49303500 + GA-rich Low_complexity Low_complexity 1 153 0 5 1126 261 83 0 0 chr13 70981210 70981246 -49303066 + (CAGGG)n Simple_repeat Simple_repeat 4 39 0 5 1126 218 105 0 26 chr13 70981905 70981944 -49302368 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 1126 309 109 0 0 chr13 70982114 70982169 -49302143 + (TCTG)n Simple_repeat Simple_repeat 4 58 0 5 1126 2405 63 28 16 chr13 70982229 70982550 -49301762 - ORR1A2 LTR MaLR 0 327 3 5 1126 1023 139 0 0 chr13 70982555 70982735 -49301577 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 5 1126 234 143 0 0 chr13 70982735 70982771 -49301541 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 1126 342 384 77 5 chr13 70982775 70982995 -49301317 - Lx8 LINE L1 -158 7315 7080 5 1126 836 265 92 4 chr13 70982974 70983224 -49301088 + Lx8 LINE L1 6543 6814 -659 5 1126 1463 248 65 18 chr13 70983228 70983614 -49300698 - MTD LTR MaLR -8 411 8 5 1126 253 298 75 0 chr13 70984522 70984616 -49299696 + MER58A DNA MER1_type 15 115 -109 5 1126 229 250 29 0 chr13 70984760 70984828 -49299484 + ID4 SINE ID 3 72 -11 5 1126 248 211 0 13 chr13 70988527 70988604 -49295708 + CT-rich Low_complexity Low_complexity 6 81 0 5 1126 351 0 0 0 chr13 70989348 70989387 -49294925 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1126 23 33 0 0 chr13 70989492 70989522 -49294790 + AT_rich Low_complexity Low_complexity 1 30 0 5 1126 312 336 99 59 chr13 70991078 70991299 -49293013 - MLT1D LTR MaLR -19 486 257 5 1126 342 0 0 0 chr13 70992365 70992403 -49291909 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1126 890 64 0 16 chr13 70992423 70992550 -49291762 + (GGGAGA)n Simple_repeat Simple_repeat 3 127 0 5 1126 345 274 24 12 chr13 70992563 70992648 -49291664 - B1F SINE Alu -63 86 1 5 1126 360 0 0 0 chr13 70993852 70993892 -49290420 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1126 288 340 36 42 chr13 70994375 70994541 -49289771 + MLT-int LTR MaLR 1571 1735 0 5 1126 372 43 0 0 chr13 70994761 70994807 -49289505 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 1126 212 158 26 0 chr13 70994822 70994860 -49289452 + CT-rich Low_complexity Low_complexity 4 42 0 5 1126 658 233 0 11 chr13 70994877 70995059 -49289253 + CT-rich Low_complexity Low_complexity 1 180 0 5 1126 238 279 17 35 chr13 70995061 70995176 -49289136 + Lx8 LINE L1 7358 7470 -3 5 1126 331 164 160 27 chr13 70995378 70995453 -49288859 + B1_Mus1 SINE Alu 12 96 -52 5 1126 1015 245 175 25 chr13 70995463 70995902 -49288410 - L1MEc LINE L1 -1162 5683 5179 5 1126 456 114 29 37 chr13 70995902 70996038 -49288274 + (TA)n Simple_repeat Simple_repeat 1 135 0 5 1126 2547 49 2 221 chr13 70996052 70996549 -49287763 - RLTR10 LTR ERVK -2 388 1 5 1126 1143 199 79 11 chr13 70996792 70997072 -49287240 - MTD LTR MaLR -8 411 113 5 1126 1345 96 11 0 chr13 70997072 70997260 -49287052 + B2_Mm1t SINE B2 4 193 0 5 1126 1794 313 67 69 chr13 70997289 70998928 -49285384 - L1MEc LINE L1 -2098 4747 3112 5 1126 21 0 0 0 chr13 70999161 70999182 -49285130 + AT_rich Low_complexity Low_complexity 1 21 0 5 1126 297 327 84 52 chr13 70999279 70999908 -49284404 - L1MEc LINE L1 -4057 2792 2144 5 1126 312 70 0 0 chr13 71000259 71000302 -49284010 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1126 233 364 0 0 chr13 71000306 71000394 -49283918 - PB1D10 SINE Alu -13 104 17 2 1126 267 146 0 0 chr13 71001757 71001812 -49282500 + (CAAAAA)n Simple_repeat Simple_repeat 5 59 0 3 1126 495 0 0 0 chr13 71001891 71001946 -49282366 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 4 1126 288 0 0 0 chr13 71002045 71002077 -49282235 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 5 1126 481 143 51 0 chr13 71002077 71002175 -49282137 - Lx4A LINE L1 -4 7054 6952 6 1126 7895 133 31 2 chr13 71002176 71004214 -49280098 - Lx4A LINE L1 -323 6735 4631 6 1126 571 321 20 20 chr13 71004289 71004489 -49279823 - MTD LTR MaLR -219 200 1 7 1126 267 114 0 0 chr13 71004758 71004802 -49279510 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1126 214 291 34 23 chr13 71005754 71005842 -49278470 - B4A SINE B4 -198 94 6 9 1126 252 148 0 0 chr13 71006664 71006725 -49277587 + (TTTTTG)n Simple_repeat Simple_repeat 3 63 0 1 1126 791 68 246 0 chr13 71006727 71006845 -49277467 - B1_Mus2 SINE Alu 0 147 1 1 1126 1264 86 10 41 chr13 71007526 71007721 -49276591 + B2_Mm2 SINE B2 1 189 -6 1 1126 962 162 6 0 chr13 71008409 71008588 -49275724 + GA-rich Low_complexity Low_complexity 1 180 0 1 1126 731 59 25 8 chr13 71009118 71009237 -49275075 + (TC)n Simple_repeat Simple_repeat 2 122 0 1 1126 280 286 27 0 chr13 71009485 71009582 -49274730 - ID4 SINE ID -48 104 1 1 1126 241 254 0 0 chr13 71009751 71009810 -49274502 - L1M1 LINE L1 -411 5889 5831 1 1126 353 283 0 0 chr13 71009862 71009961 -49274351 + L1M2 LINE L1 4920 5018 -1125 1 1126 242 254 79 0 chr13 71010151 71010214 -49274098 - MLT1C LTR MaLR -17 450 383 1 1126 1577 135 33 69 chr13 71012851 71013185 -49271127 + RLTRETN_Mm LTR ERVK 1 322 0 1 1126 2242 128 0 32 chr13 71013234 71013572 -49270740 - ORR1A2 LTR MaLR 0 327 1 2 1126 1051 206 206 39 chr13 71014819 71015178 -49269134 + RLTR23 LTR ERV1 12 430 0 2 1126 187 262 30 15 chr13 71015640 71015706 -49268606 + MIRb SINE MIR 164 230 -38 2 1126 731 228 116 19 chr13 71017612 71017827 -49266485 - MTEa LTR MaLR -143 236 1 2 1126 369 0 0 0 chr13 71018195 71018236 -49266076 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2 1126 229 279 164 0 chr13 71018721 71018843 -49265469 - RMER15 LTR ERVL -40 535 394 2 1126 807 292 14 130 chr13 71018873 71018970 -49265342 + MTE2a LTR MaLR 6 76 -303 2 1126 2081 139 95 16 chr13 71018970 71019349 -49264963 + RLTR9E LTR ERVK 1 409 0 2 1126 807 292 14 130 chr13 71019349 71019621 -49264691 + MTE2a LTR MaLR 77 332 -47 2 1126 212 286 32 0 chr13 71021424 71021487 -49262825 + CT-rich Low_complexity Low_complexity 2 66 0 2 1126 630 279 7 0 chr13 71021489 71021643 -49262669 - ID_B1 SINE B4 -36 188 34 2 1126 761 332 104 4 chr13 71025930 71026402 -49257910 - Lx8 LINE L1 -1 7472 6954 3 1126 245 326 21 11 chr13 71027025 71027118 -49257194 + MLT1A1 LTR MaLR 37 130 -278 3 1126 658 164 0 0 chr13 71027723 71027839 -49256473 + ORR1B2-int LTR MaLR 1300 1415 -94 3 1126 816 147 84 0 chr13 71027871 71028014 -49256298 + ORR1B2 LTR MaLR 213 367 0 3 1126 573 304 85 34 chr13 71028163 71028541 -49255771 + MTE2a LTR MaLR 4 374 -5 3 1126 229 278 62 83 chr13 71028559 71028594 -49255718 - B2_Mm2 SINE B2 -6 189 150 3 1126 681 13 0 0 chr13 71028594 71028672 -49255640 + (TA)n Simple_repeat Simple_repeat 1 78 0 3 1126 332 278 62 83 chr13 71028672 71028828 -49255484 - B3 SINE B2 -65 151 2 3 1126 1710 135 57 93 chr13 71029309 71029676 -49254636 - ORR1B1 LTR MaLR 0 394 41 3 1126 387 60 0 0 chr13 71031033 71031083 -49253229 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1126 867 220 27 10 chr13 71031269 71031465 -49252847 - Lx9 LINE L1 -415 7229 7077 3 1126 215 31 31 0 chr13 71031488 71031520 -49252792 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 3 1126 1209 177 225 12 chr13 71031526 71031864 -49252448 - RMER17C LTR ERVK 0 410 1 4 1126 267 260 27 71 chr13 71032171 71032283 -49252029 + RMER12 LTR ERVK 750 856 -466 4 1126 266 317 0 14 chr13 71032285 71032429 -49251883 + (TATATG)n Simple_repeat Simple_repeat 3 144 0 4 1126 384 191 19 0 chr13 71032429 71032534 -49251778 + Lx9 LINE L1 7458 7564 -80 4 1126 231 88 0 0 chr13 71032706 71032740 -49251572 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 4 1126 274 281 97 45 chr13 71033923 71034057 -49250255 + MLT1A0 LTR MaLR 225 365 0 4 1126 281 186 14 0 chr13 71034250 71034320 -49249992 + (TA)n Simple_repeat Simple_repeat 1 71 0 4 1126 610 256 0 0 chr13 71034436 71034573 -49249739 - MTD LTR MaLR -163 256 120 4 1126 531 112 0 0 chr13 71035373 71035453 -49248859 + (GGA)n Simple_repeat Simple_repeat 3 82 0 4 1126 777 41 0 0 chr13 71035848 71035945 -49248367 + (TTCC)n Simple_repeat Simple_repeat 4 100 0 4 1126 842 84 4 83 chr13 71035945 71036214 -49248098 + (TCTA)n Simple_repeat Simple_repeat 1 247 0 5 1126 1809 208 109 53 chr13 71036352 71036845 -49247467 + RMER2 LTR ERV1 6 526 -41 5 1126 34 65 0 0 chr13 71037641 71037703 -49246609 + AT_rich Low_complexity Low_complexity 1 62 0 5 1126 544 292 138 35 chr13 71037739 71038051 -49246261 - Lx8 LINE L1 -2 7471 7128 5 1126 714 181 0 0 chr13 71039266 71039415 -49244897 + (CA)n Simple_repeat Simple_repeat 1 149 0 5 1126 216 0 0 0 chr13 71039475 71039499 -49244813 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1126 276 123 0 109 chr13 71039692 71039756 -49244556 - PB1D9 SINE Alu -1 119 63 5 1126 316 225 10 82 chr13 71040328 71040425 -49243887 - B3A SINE B2 0 198 109 5 1127 411 107 0 0 chr13 71041942 71042017 -49242295 + (CA)n Simple_repeat Simple_repeat 2 76 0 5 1127 267 304 17 59 chr13 71043162 71043281 -49241031 - RMER13A LTR ERVK -652 208 95 5 1127 493 244 24 66 chr13 71045002 71045169 -49239143 + RSINE1 SINE B4 6 165 0 6 1127 523 126 31 8 chr13 71045169 71045297 -49239015 + (CA)n Simple_repeat Simple_repeat 1 131 0 6 1127 754 118 25 31 chr13 71045312 71045802 -49238510 + (CA)n Simple_repeat Simple_repeat 1 487 0 6 1127 198 0 0 0 chr13 71045823 71045845 -49238467 + (CAAT)n Simple_repeat Simple_repeat 2 23 0 6 1127 417 344 35 35 chr13 71048887 71049113 -49235199 + L3 LINE CR1 3443 3668 -821 6 1127 513 0 0 0 chr13 71050244 71050301 -49234011 + (TC)n Simple_repeat Simple_repeat 2 58 0 6 1127 388 338 19 13 chr13 71051135 71051291 -49233021 + RMER5 LTR ERV1 360 516 -18 6 1127 272 27 27 0 chr13 71051918 71051955 -49232357 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1127 253 229 93 35 chr13 71053615 71053701 -49230611 + B4A SINE B4 194 284 -8 6 1127 3265 207 90 27 chr13 71053819 71055162 -49229150 - Lx9 LINE L1 -1035 6609 5021 6 1127 3749 215 108 20 chr13 71055151 71056080 -49228232 + Lx9 LINE L1 6634 7643 -1 6 1127 14056 80 14 7 chr13 71056194 71058825 -49225487 + L1VL2 LINE L1 332 2980 -635 6 1127 1408 56 5 5 chr13 71058818 71059014 -49225298 + MusHAL1 LINE L1 1891 2086 -626 7 1127 21 57 0 0 chr13 71059168 71059203 -49225109 + AT_rich Low_complexity Low_complexity 1 35 0 7 1127 516 132 0 0 chr13 71059269 71059352 -49224960 + (TA)n Simple_repeat Simple_repeat 1 83 0 7 1127 26 30 0 0 chr13 71059665 71059698 -49224614 + AT_rich Low_complexity Low_complexity 1 33 0 7 1127 913 236 94 4 chr13 71059848 71060103 -49224209 + MTD LTR MaLR 85 362 -57 7 1127 414 0 0 0 chr13 71061141 71061187 -49223125 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1127 272 360 22 0 chr13 71061618 71061757 -49222555 - MLT1E3 LTR MaLR 0 653 512 7 1127 233 338 32 117 chr13 71061778 71061932 -49222380 - MLT1E3 LTR MaLR -207 417 277 7 1127 377 223 70 48 chr13 71061943 71062109 -49222203 - MLT1E3 LTR MaLR -376 277 60 7 1127 1487 214 78 25 chr13 71062120 71062148 -49222164 - MTD LTR MaLR 0 419 389 7 1127 315 0 0 0 chr13 71062148 71062183 -49222129 + (TAA)n Simple_repeat Simple_repeat 2 36 0 7 1127 1487 214 78 25 chr13 71062183 71062552 -49221760 - MTD LTR MaLR -31 388 1 7 1127 36166 40 0 1 chr13 71062952 71067536 -49216776 + L1Md_T LINE L1 912 5589 -297 7 1127 8536 34 0 4 chr13 71067536 71068536 -49215776 + L1Md_T LINE L1 5590 6585 0 7 1127 25 0 0 0 chr13 71069030 71069055 -49215257 + AT_rich Low_complexity Low_complexity 1 25 0 8 1127 2589 77 0 0 chr13 71069887 71070224 -49214088 - L1_Mm LINE L1 -1784 4099 3763 8 1127 1867 68 4 0 chr13 71070226 71070462 -49213850 + L1_Mus1 LINE L1 6331 6567 0 8 1127 234 238 63 0 chr13 71071425 71071488 -49212824 - Lx9 LINE L1 -1 7643 7577 8 1127 1208 42 0 0 chr13 71074867 71075010 -49209302 - B1_Mus2 SINE Alu 0 147 5 8 1127 1438 308 155 57 chr13 71075366 71076681 -49207631 - L1MC3 LINE L1 -258 7527 6084 8 1127 198 0 0 0 chr13 71076965 71076987 -49207325 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 8 1127 405 0 0 0 chr13 71077079 71077124 -49207188 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 8 1127 599 263 11 33 chr13 71077124 71077305 -49207007 - Lx5 LINE L1 -19 7031 6855 8 1127 1454 62 0 6 chr13 71077340 71077519 -49206793 - B2_Mm2 SINE B2 -17 178 1 8 1127 253 267 171 37 chr13 71077522 71077709 -49206603 + MER31A LTR ERV1 270 481 -4 9 1127 1806 221 22 8 chr13 71077862 71078263 -49206049 + Lx9 LINE L1 7089 7495 -149 9 1127 2022 259 78 43 chr13 71078316 71079007 -49205305 - Lx9 LINE L1 -851 6793 6079 9 1127 279 281 83 50 chr13 71079850 71080060 -49204252 + MER67B LTR ERV1 20 358 -303 9 1127 1600 289 104 8 chr13 71080642 71081281 -49203031 - Lx8 LINE L1 -706 6767 6073 9 1127 303 28 0 0 chr13 71081584 71081620 -49202692 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 1127 7439 60 17 38 chr13 71081678 71082293 -49202019 - L1_Mus1 LINE L1 -2 6565 5963 9 1127 1087 83 7 0 chr13 71082293 71082438 -49201874 - B1_Mm SINE Alu -1 146 1 9 1127 31555 113 25 12 chr13 71082438 71088052 -49196260 - L1_Mus1 LINE L1 -605 5962 279 9 1127 833 301 125 25 chr13 71088736 71089169 -49195143 + Lx8 LINE L1 6622 7097 -376 9 1127 239 175 0 17 chr13 71089204 71089262 -49195050 + GA-rich Low_complexity Low_complexity 1 57 0 9 1127 388 226 31 41 chr13 71089385 71089482 -49194830 + B3A SINE B2 4 99 -99 1 1127 3427 61 77 0 chr13 71089482 71089923 -49194389 - MT2C_Mm LTR ERVL 0 475 1 1 1127 321 0 0 0 chr13 71089923 71089961 -49194351 - MERVL_2A-int LTR ERVL 0 5485 5448 1 1127 339 125 26 53 chr13 71089961 71090037 -49194275 - ORR1A3-int LTR MaLR -1323 640 567 1 1127 20469 80 5 0 chr13 71090037 71094054 -49190258 - MERVL_2A-int LTR ERVL -114 5371 1336 1 1127 2458 58 96 6 chr13 71094056 71094422 -49189890 - MT2C_Mm LTR ERVL -76 399 1 1 1127 405 116 0 0 chr13 71094442 71094511 -49189801 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 1 1127 466 304 91 38 chr13 71094555 71094873 -49189439 - L1M2 LINE L1 -504 5793 5459 1 1127 269 304 0 80 chr13 71094918 71095018 -49189294 - B1F SINE Alu -3 146 55 1 1127 316 301 32 68 chr13 71095172 71095393 -49188919 - L1M2 LINE L1 -816 5327 5065 1 1127 860 144 7 13 chr13 71095810 71095965 -49188347 - L1_Mur3 LINE L1 -2146 3734 3581 1 1127 510 17 0 0 chr13 71095999 71096058 -49188254 + (TA)n Simple_repeat Simple_repeat 2 60 0 1 1127 650 299 147 29 chr13 71096068 71096620 -49187692 - L1M2 LINE L1 -1104 5039 4423 1 1127 227 267 22 34 chr13 71096616 71096705 -49187607 + L1M2 LINE L1 4952 5039 -1104 1 1127 183 42 0 0 chr13 71096766 71096790 -49187522 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1127 493 337 6 25 chr13 71098048 71098290 -49186022 + CT-rich Low_complexity Low_complexity 1 237 0 1 1127 183 300 0 0 chr13 71099928 71099978 -49184334 - L4 LINE RTE -204 1825 1776 1 1127 298 61 20 20 chr13 71100330 71100380 -49183932 + (CAA)n Simple_repeat Simple_repeat 1 50 0 1 1127 347 41 20 0 chr13 71100692 71100741 -49183571 + (TCTCCC)n Simple_repeat Simple_repeat 3 52 0 1 1127 703 288 148 0 chr13 71101964 71102308 -49182004 - Lx9 LINE L1 -45 7599 7205 1 1127 321 47 0 0 chr13 71102723 71102766 -49181546 + (GGA)n Simple_repeat Simple_repeat 2 44 0 1 1127 1023 98 11 17 chr13 71102822 71102999 -49181313 + (GGAGA)n Simple_repeat Simple_repeat 1 176 0 1 1127 303 28 0 0 chr13 71103202 71103238 -49181074 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1127 531 0 0 0 chr13 71103239 71103298 -49181014 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 1127 22 0 0 0 chr13 71103995 71104017 -49180295 + AT_rich Low_complexity Low_complexity 1 22 0 1 1127 244 276 53 0 chr13 71105012 71105088 -49179224 + Lx2B LINE L1 6917 6996 -4 1 1127 2261 141 8 3 chr13 71105162 71105525 -49178787 + RLTR8 LTR ERVK 1 365 0 1 1127 243 323 0 0 chr13 71107826 71107888 -49176424 + RMER30 DNA MER1_type 21 82 -120 1 1127 192 77 0 0 chr13 71107890 71107916 -49176396 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1127 475 239 23 0 chr13 71107937 71108067 -49176245 + ORR1D2 LTR MaLR 1 133 -237 1 1127 548 29 0 14 chr13 71109696 71109767 -49174545 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 1127 1837 299 67 8 chr13 71110892 71111519 -49172793 + Lx8 LINE L1 6679 7342 -131 1 1127 441 290 99 43 chr13 71111794 71112097 -49172215 - L1ME1 LINE L1 -316 5863 5544 1 1127 1250 319 79 18 chr13 71112122 71112678 -49171634 + Lx8 LINE L1 6525 7114 -359 1 1127 821 135 0 13 chr13 71112708 71112858 -49171454 + (TTCC)n Simple_repeat Simple_repeat 3 150 0 1 1127 312 122 0 20 chr13 71112858 71112908 -49171404 + (TTTTC)n Simple_repeat Simple_repeat 5 53 0 1 1127 215 173 19 0 chr13 71112913 71112965 -49171347 + CT-rich Low_complexity Low_complexity 1 53 0 1 1127 246 294 15 0 chr13 71113321 71113389 -49170923 - L1MB2 LINE L1 -61 6110 6042 1 1127 384 262 38 69 chr13 71113486 71113617 -49170695 + Lx8 LINE L1 7226 7352 -121 1 1127 936 226 0 5 chr13 71113622 71113813 -49170499 - RLTR14 LTR ERV1 0 382 193 1 1127 323 125 0 18 chr13 71114549 71114606 -49169706 + HAL1-3A_ME LINE L1 1963 2018 -840 1 1127 898 108 22 33 chr13 71114608 71114790 -49169522 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 1127 667 160 28 22 chr13 71114820 71114999 -49169313 + (CATA)n Simple_repeat Simple_repeat 1 180 0 1 1127 22 0 0 0 chr13 71115032 71115054 -49169258 + AT_rich Low_complexity Low_complexity 1 22 0 1 1127 276 53 0 0 chr13 71115883 71115921 -49168391 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1127 252 295 67 11 chr13 71116091 71116180 -49168132 + PB1D10 SINE Alu 5 98 -19 1 1127 270 0 0 0 chr13 71116191 71116221 -49168091 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1 1127 229 273 43 54 chr13 71117028 71117121 -49167191 + MLT1F2 LTR MaLR 219 310 -250 1 1127 540 0 0 0 chr13 71117680 71117740 -49166572 + (CA)n Simple_repeat Simple_repeat 2 61 0 1 1127 272 158 18 0 chr13 71117747 71117804 -49166508 + GA-rich Low_complexity Low_complexity 2 59 0 1 1127 401 196 8 97 chr13 71118379 71118503 -49165809 + ORR1B2 LTR MaLR 6 118 -249 1 1127 1942 137 7 7 chr13 71118521 71118830 -49165482 + ORR1B2 LTR MaLR 59 367 0 1 1127 397 332 28 14 chr13 71118865 71119079 -49165233 + L1M2 LINE L1 5544 5760 -531 1 1127 375 281 63 77 chr13 71120030 71120315 -49163997 - B4 SINE B4 -10 282 2 1 1127 227 250 0 0 chr13 71120480 71120532 -49163780 + MTE2a LTR MaLR 44 95 -284 1 1127 936 299 58 43 chr13 71120531 71120856 -49163456 + MTE2a LTR MaLR 50 379 0 1 1127 632 293 26 36 chr13 71121518 71121713 -49162599 + ID_B1 SINE B4 2 194 -30 1 1127 337 289 32 24 chr13 71121607 71121731 -49162581 + B1F1 SINE Alu 9 133 -16 1 1127 465 19 0 0 chr13 71122324 71122378 -49161934 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1127 333 360 11 39 chr13 71122764 71122946 -49161366 + C-rich Low_complexity Low_complexity 3 179 0 1 1127 526 308 41 0 chr13 71122983 71123155 -49161157 + C-rich Low_complexity Low_complexity 1 179 0 1 1127 686 219 111 29 chr13 71123803 71123827 -49160485 - Lx9 LINE L1 -1 7643 7619 1 1127 3360 48 2 0 chr13 71123827 71124222 -49160090 + MTA_Mm LTR MaLR 1 396 0 1 1127 686 219 111 29 chr13 71124222 71124441 -49159871 - Lx9 LINE L1 -26 7618 7380 1 1127 723 280 177 38 chr13 71124752 71125301 -49159011 - Lx9 LINE L1 -63 7581 6957 1 1127 266 234 17 35 chr13 71127541 71127656 -49156656 - Lx9 LINE L1 -1 7643 7531 1 1127 216 0 0 0 chr13 71128163 71128187 -49156125 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1127 309 230 0 0 chr13 71128612 71128712 -49155600 + (CA)n Simple_repeat Simple_repeat 2 101 0 1 1127 252 0 0 0 chr13 71129463 71129491 -49154821 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1127 1715 144 113 0 chr13 71130881 71131172 -49153140 + ORR1A3 LTR MaLR 3 326 0 1 1127 232 355 0 9 chr13 71131276 71131384 -49152928 + G-rich Low_complexity Low_complexity 3 109 0 1 1127 334 201 29 29 chr13 71131396 71131534 -49152778 + G-rich Low_complexity Low_complexity 2 139 0 1 1127 1949 166 29 53 chr13 71132708 71133084 -49151228 - ORR1B2 LTR MaLR 0 367 1 1 1127 1915 188 83 18 chr13 71133517 71133912 -49150400 + MTC LTR MaLR 1 421 0 1 1127 235 320 13 0 chr13 71134784 71134862 -49149450 + ID2 SINE ID 3 81 -2 1 1127 360 273 29 109 chr13 71135002 71135043 -49149269 - B2_Mm1a SINE B2 0 193 158 1 1127 369 0 0 0 chr13 71135043 71135084 -49149228 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1127 243 0 0 0 chr13 71135085 71135112 -49149200 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1127 723 273 29 109 chr13 71135112 71135278 -49149034 - B3A SINE B2 -35 163 1 1 1127 208 224 35 0 chr13 71135424 71135482 -49148830 + (TA)n Simple_repeat Simple_repeat 2 61 0 1 1127 2851 169 72 21 chr13 71136310 71136891 -49147421 - RMER19C LTR ERVK 0 611 1 1 1127 317 313 73 32 chr13 71137274 71137491 -49146821 - LTR53 LTR ERVL -36 483 258 1 1127 562 277 128 86 chr13 71137491 71137558 -49146754 - MT2A LTR ERVL 0 601 545 1 1127 521 30 0 15 chr13 71137558 71137626 -49146686 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 1127 252 0 0 0 chr13 71137627 71137655 -49146657 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1127 675 235 85 91 chr13 71137655 71138053 -49146259 - MT2A LTR ERVL -57 544 1 1 1127 252 0 0 0 chr13 71140473 71140501 -49143811 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1127 2281 67 0 27 chr13 71143996 71144333 -49139979 - MTB_Mm LTR MaLR -79 328 1 1 1127 222 291 23 11 chr13 71145470 71145557 -49138755 + (TATG)n Simple_repeat Simple_repeat 4 91 0 1 1127 526 293 142 27 chr13 71146418 71146755 -49137557 - MLT1C LTR MaLR -49 418 43 1 1127 9459 159 69 11 chr13 71147667 71150380 -49133932 - Lx5 LINE L1 0 7050 4147 1 1127 2297 116 3 3 chr13 71150686 71151015 -49133297 - ORR1A4 LTR MaLR 0 329 1 1 1127 3374 38 2 2 chr13 71151401 71151795 -49132517 + MTA_Mm LTR MaLR 1 394 -2 1 1127 999 68 0 0 chr13 71152896 71153028 -49131284 + (TC)n Simple_repeat Simple_repeat 1 132 0 1 1127 322 148 24 12 chr13 71153034 71153116 -49131196 + CT-rich Low_complexity Low_complexity 4 86 0 1 1127 303 304 60 44 chr13 71153370 71153497 -49130815 - B4A SINE B4 -163 129 2 1 1127 239 309 74 74 chr13 71159642 71159978 -49124334 + L1MD LINE L1 4579 4914 -1232 1 1127 697 212 6 6 chr13 71160246 71160426 -49123886 + CT-rich Low_complexity Low_complexity 1 180 0 1 1127 417 229 93 64 chr13 71160482 71160622 -49123690 - B1F SINE Alu -1 148 5 1 1127 313 247 37 0 chr13 71160933 71161014 -49123298 + CT-rich Low_complexity Low_complexity 3 86 0 1 1127 393 210 5 46 chr13 71161098 71161198 -49123114 - PB1D10 SINE Alu -1 119 21 1 1127 499 250 5 64 chr13 71161824 71162012 -49122300 + HAL1-2a_MD LINE L1 2343 2519 -505 1 1127 243 189 0 0 chr13 71162012 71162065 -49122247 + (CAT)n Simple_repeat Simple_repeat 2 54 0 1 1127 384 290 22 38 chr13 71162068 71162251 -49122061 + HAL1-2a_MD LINE L1 2347 2526 -498 1 1127 618 68 0 0 chr13 71162418 71162506 -49121806 + (TC)n Simple_repeat Simple_repeat 1 88 0 1 1127 632 102 30 17 chr13 71163451 71163570 -49120742 + B1_Mus1 SINE Alu 1 112 -5 1 1127 510 149 0 0 chr13 71164216 71164303 -49120009 + (T)n Simple_repeat Simple_repeat 1 87 0 1 1127 284 222 0 0 chr13 71166297 71166360 -49117952 - L1MA5 LINE L1 -8 6292 6230 1 1127 276 310 85 36 chr13 71166436 71166660 -49117652 - L1MA5 LINE L1 -361 5939 5705 1 1127 429 54 0 0 chr13 71168936 71168992 -49115320 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1127 238 130 42 32 chr13 71169044 71169139 -49115173 + A-rich Low_complexity Low_complexity 6 101 0 1 1127 292 189 42 0 chr13 71169139 71169234 -49115078 + (TA)n Simple_repeat Simple_repeat 2 100 0 1 1127 692 234 28 22 chr13 71169571 71169750 -49114562 + B3A SINE B2 1 180 -18 1 1127 378 0 0 0 chr13 71171904 71171946 -49112366 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 140 1104 95 0 0 chr13 71171972 71172119 -49112193 + B1_Mm SINE Alu 1 147 0 2 1128 216 0 0 0 chr13 71172119 71172143 -49112169 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1128 354 292 27 13 chr13 71172158 71172307 -49112005 + (CATATA)n Simple_repeat Simple_repeat 6 156 0 2 1128 348 270 11 58 chr13 71172237 71172426 -49111886 + (CATA)n Simple_repeat Simple_repeat 1 180 0 2 1128 275 281 22 60 chr13 71172488 71172670 -49111642 + (CATA)n Simple_repeat Simple_repeat 4 178 0 2 1128 375 268 49 0 chr13 71172821 71172985 -49111327 + (CATA)n Simple_repeat Simple_repeat 4 175 0 2 1128 232 289 10 20 chr13 71173015 71173114 -49111198 + (CA)n Simple_repeat Simple_repeat 1 98 0 2 1128 225 0 0 0 chr13 71176249 71176274 -49108038 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 2 1128 405 0 0 0 chr13 71176328 71176373 -49107939 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1128 330 333 6 19 chr13 71176775 71176931 -49107381 + (CATATA)n Simple_repeat Simple_repeat 1 154 0 2 1128 383 291 158 12 chr13 71177183 71177437 -49106875 + B4A SINE B4 2 292 0 2 1128 657 142 17 17 chr13 71177445 71177617 -49106695 + (CA)n Simple_repeat Simple_repeat 2 173 0 2 1128 216 209 23 0 chr13 71177617 71177660 -49106652 + (CATA)n Simple_repeat Simple_repeat 3 46 0 2 1128 356 183 28 21 chr13 71177666 71177811 -49106501 + (CA)n Simple_repeat Simple_repeat 2 147 0 2 1128 243 230 11 22 chr13 71177936 71178025 -49106287 + GA-rich Low_complexity Low_complexity 1 88 0 2 1128 192 308 93 18 chr13 71178196 71178305 -49106007 + MIRb SINE MIR 2 120 -148 2 1128 300 297 0 38 chr13 71178898 71179003 -49105309 + GA-rich Low_complexity Low_complexity 3 103 0 2 1128 299 243 14 0 chr13 71180175 71180245 -49104067 + PB1D10 SINE Alu 47 117 0 2 1128 732 314 40 88 chr13 71180358 71180756 -49103556 + MTE2b LTR MaLR 1 379 0 2 1128 279 321 82 7 chr13 71180799 71180934 -49103378 + L1M4b LINE L1 155 299 -7035 2 1128 9913 163 15 18 chr13 71181621 71183380 -49100932 + RMER16-int LTR ERVK 3651 5404 -2 2 1128 759 170 75 35 chr13 71183383 71183700 -49100612 + RMER16 LTR ERVK 198 533 0 2 1128 2299 158 13 3 chr13 71183704 71184078 -49100234 - ORR1C1 LTR MaLR 0 378 1 2 1128 236 335 80 0 chr13 71184140 71184316 -49099996 + L1M4b LINE L1 6123 6312 -732 2 1128 498 281 100 37 chr13 71184395 71184716 -49099596 - L1MA9 LINE L1 -65 6247 5907 2 1128 249 180 20 20 chr13 71184776 71184827 -49099485 + PB1D10 SINE Alu 18 68 -49 2 1128 764 282 67 21 chr13 71186413 71186728 -49097584 + MTD LTR MaLR 3 360 -59 2 1128 3287 89 8 50 chr13 71186737 71187235 -49097077 + L1_Mus3 LINE L1 6162 6638 0 2 1128 21 0 0 0 chr13 71187355 71187376 -49096936 + AT_rich Low_complexity Low_complexity 1 21 0 2 1128 218 222 0 0 chr13 71187526 71187571 -49096741 + (TAA)n Simple_repeat Simple_repeat 1 45 0 2 1128 513 92 0 0 chr13 71189002 71189078 -49095234 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 2 1128 227 325 123 47 chr13 71189276 71189447 -49094865 - Tigger7 DNA MER2_type -8 2483 2300 2 1128 27 29 0 0 chr13 71191949 71191983 -49092329 + AT_rich Low_complexity Low_complexity 1 34 0 2 1128 268 306 62 23 chr13 71195036 71195213 -49089099 - L1MCa LINE L1 -4705 1803 1620 2 1128 869 271 137 33 chr13 71195926 71196407 -49087905 - Lx9 LINE L1 -4 7640 7110 2 1128 3722 95 16 7 chr13 71196407 71196961 -49087351 + RMER2 LTR ERV1 1 559 -8 2 1128 1472 251 21 8 chr13 71197035 71197408 -49086904 - Lx9 LINE L1 -598 7046 6669 2 1128 1634 219 124 16 chr13 71199743 71200234 -49084078 + Lx9 LINE L1 7093 7636 -8 2 1128 778 229 159 15 chr13 71200357 71200627 -49083685 + MTE2a LTR MaLR 60 368 -11 2 1128 405 0 0 0 chr13 71200737 71200782 -49083530 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1128 289 327 23 14 chr13 71202336 71202553 -49081759 - L1M2 LINE L1 -953 5190 4972 2 1128 429 109 0 0 chr13 71202693 71202757 -49081555 + (CA)n Simple_repeat Simple_repeat 2 65 0 2 1128 237 103 33 33 chr13 71202789 71202849 -49081463 + A-rich Low_complexity Low_complexity 2 61 0 2 1128 868 98 0 0 chr13 71203280 71203412 -49080900 - B1_Mus1 SINE Alu 0 148 17 2 1128 731 239 277 10 chr13 71204641 71204769 -49079543 - ORR1D2 LTR MaLR 0 370 228 2 1128 787 46 9 9 chr13 71204769 71204878 -49079434 + (GGGAGA)n Simple_repeat Simple_repeat 1 109 0 2 1128 731 239 277 10 chr13 71204878 71205041 -49079271 - ORR1D2 LTR MaLR -143 227 2 2 1128 23 0 0 0 chr13 71205400 71205423 -49078889 + AT_rich Low_complexity Low_complexity 1 23 0 2 1128 374 179 0 0 chr13 71206241 71206308 -49078004 - B4 SINE B4 -217 75 9 2 1128 628 86 0 19 chr13 71210093 71210200 -49074112 + (GGA)n Simple_repeat Simple_repeat 2 106 0 2 1128 241 274 36 0 chr13 71210301 71210385 -49073927 + L1MC LINE L1 4955 5041 -1105 2 1128 887 333 22 22 chr13 71210448 71210807 -49073505 - Lx8 LINE L1 -715 6758 6400 2 1128 431 325 32 0 chr13 71210830 71210987 -49073325 - Lx8 LINE L1 -155 7318 7157 2 1128 28 29 0 0 chr13 71211856 71211891 -49072421 + AT_rich Low_complexity Low_complexity 1 35 0 2 1128 21 36 0 0 chr13 71211898 71211926 -49072386 + AT_rich Low_complexity Low_complexity 1 28 0 2 1128 185 79 79 0 chr13 71214002 71214040 -49070272 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 2 1128 283 247 10 110 chr13 71214053 71214153 -49070159 - B1F SINE Alu -51 98 9 2 1128 542 286 102 26 chr13 71214948 71215214 -49069098 + Lx8 LINE L1 7173 7458 -15 2 1128 451 297 108 19 chr13 71217949 71218162 -49066150 - B4A SINE B4 -26 266 35 2 1128 253 344 11 104 chr13 71219220 71219402 -49064910 + B4A SINE B4 7 171 -121 2 1128 1645 227 31 3 chr13 71219683 71220071 -49064241 - MTD LTR MaLR -14 405 7 2 1128 993 260 187 65 chr13 71220081 71221041 -49063271 - MTD-int LTR MaLR -10 1088 1 2 1128 1337 258 79 0 chr13 71221041 71221428 -49062884 - MTD LTR MaLR -14 405 1 2 1128 299 278 98 42 chr13 71222633 71222847 -49061465 + MLT1C LTR MaLR 219 444 -23 2 1128 328 164 45 0 chr13 71223210 71223277 -49061035 - B2_Mm2 SINE B2 -14 181 112 2 1128 204 121 30 0 chr13 71223829 71223862 -49060450 + (TTG)n Simple_repeat Simple_repeat 3 36 0 2 1128 265 355 36 45 chr13 71223968 71224192 -49060120 + L1MC3 LINE L1 6692 6913 -872 2 1128 4458 12 2 12 chr13 71224540 71225038 -49059274 + MT2_Mm LTR ERVL 1 493 0 2 1128 48308 16 6 0 chr13 71225038 71230364 -49053948 + MERVL-int LTR ERVL 1 5360 -125 2 1128 336 179 46 35 chr13 71230364 71230451 -49053861 + ORR1A3-int LTR MaLR 553 640 -1323 2 1128 321 0 0 0 chr13 71230451 71230489 -49053823 + MERVL-int LTR ERVL 5448 5485 0 2 1128 4458 12 2 12 chr13 71230489 71230987 -49053325 + MT2_Mm LTR ERVL 1 493 0 2 1128 240 111 0 0 chr13 71231029 71231074 -49053238 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1128 227 348 129 20 chr13 71231429 71231684 -49052628 + L1MC3 LINE L1 7294 7576 -209 2 1128 1189 62 0 0 chr13 71232028 71232174 -49052138 - B1_Mus2 SINE Alu 0 147 2 2 1128 188 56 0 77 chr13 71232530 71232569 -49051743 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1128 270 200 0 62 chr13 71233483 71233547 -49050765 - L1M1 LINE L1 -426 5874 5815 2 1128 1720 162 107 12 chr13 71236080 71236302 -49048010 + Lx LINE L1 6284 6518 -136 2 1128 204 40 0 0 chr13 71236302 71236327 -49047985 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 2 1128 1720 162 107 12 chr13 71236327 71236442 -49047870 + Lx LINE L1 6519 6651 -3 2 1128 256 273 151 76 chr13 71236607 71236726 -49047586 + MTEa LTR MaLR 26 153 -226 2 1128 350 323 39 8 chr13 71240521 71240649 -49043663 + B1F SINE Alu 10 141 -8 2 1128 338 281 0 12 chr13 71240661 71240744 -49043568 + ID4 SINE ID 1 82 -1 2 1128 1610 133 0 4 chr13 71241109 71241380 -49042932 - Lx2 LINE L1 -1 6996 6727 2 1128 631 60 24 0 chr13 71241657 71241740 -49042572 - L1_Mus2 LINE L1 -264 6302 6218 2 1128 2122 61 4 0 chr13 71241740 71242004 -49042308 + L1_Mus2 LINE L1 6302 6566 0 2 1128 345 47 0 0 chr13 71242528 71242571 -49041741 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1128 198 0 0 0 chr13 71242571 71242593 -49041719 + (TG)n Simple_repeat Simple_repeat 2 23 0 2 1128 363 44 0 0 chr13 71242725 71242770 -49041542 + (GA)n Simple_repeat Simple_repeat 1 45 0 2 1128 288 0 0 0 chr13 71242994 71243026 -49041286 + (TC)n Simple_repeat Simple_repeat 2 33 0 2 1128 225 0 0 0 chr13 71243026 71243051 -49041261 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1128 300 53 0 0 chr13 71243051 71243089 -49041223 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 1128 30 0 0 0 chr13 71243106 71243136 -49041176 + AT_rich Low_complexity Low_complexity 1 30 0 2 1128 183 42 0 0 chr13 71244643 71244667 -49039645 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1128 1683 132 38 67 chr13 71245134 71245476 -49038836 - ORR1A4 LTR MaLR -1 378 1 2 1128 266 282 0 0 chr13 71245846 71245931 -49038381 + (TATG)n Simple_repeat Simple_repeat 2 86 0 2 1128 480 254 0 0 chr13 71245932 71246109 -49038203 + (TG)n Simple_repeat Simple_repeat 2 178 0 2 1128 207 269 14 29 chr13 71246112 71246181 -49038131 + (TATG)n Simple_repeat Simple_repeat 3 70 0 2 1128 558 197 0 0 chr13 71246183 71246315 -49037997 + (TG)n Simple_repeat Simple_repeat 1 132 0 2 1128 606 246 50 74 chr13 71246315 71246614 -49037698 - B4A SINE B4 0 292 1 2 1128 255 295 103 39 chr13 71247068 71247223 -49037089 - L1M2 LINE L1 -399 5901 5737 2 1128 1282 171 9 5 chr13 71247421 71247644 -49036668 - URR1A DNA MER1_type -2 224 1 2 1128 302 287 177 25 chr13 71247748 71248030 -49036282 - L1M2 LINE L1 -1080 5063 4739 2 1128 765 98 0 0 chr13 71248033 71248145 -49036167 + (TTCTC)n Simple_repeat Simple_repeat 4 115 0 2 1128 3938 88 42 12 chr13 71248166 71248733 -49035579 - Lx3A LINE L1 -3 6978 6395 2 1128 2532 98 73 0 chr13 71248733 71249102 -49035210 + Lx3_Mus LINE L1 5988 6383 -626 2 1128 371 265 10 10 chr13 71249878 71249981 -49034331 + B3A SINE B2 29 131 -67 2 1128 252 59 0 0 chr13 71249985 71250019 -49034293 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1128 672 247 10 73 chr13 71250123 71250328 -49033984 - B3A SINE B2 -6 192 1 2 1128 283 136 0 43 chr13 71250899 71250945 -49033367 - Lx8 LINE L1 -317 7156 7113 2 1128 189 0 0 0 chr13 71251022 71251043 -49033269 + (TC)n Simple_repeat Simple_repeat 2 22 0 2 1128 297 118 0 0 chr13 71251043 71251093 -49033219 + (TA)n Simple_repeat Simple_repeat 2 52 0 2 1128 306 0 0 0 chr13 71251329 71251363 -49032949 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1128 687 128 0 0 chr13 71251421 71251530 -49032782 + (TA)n Simple_repeat Simple_repeat 2 110 0 3 1128 216 170 43 0 chr13 71251564 71251611 -49032701 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 3 1128 1069 238 84 128 chr13 71251717 71252108 -49032204 - ORR1D1 LTR MaLR 0 374 1 3 1128 728 126 50 36 chr13 71253051 71253191 -49031121 - Lx2 LINE L1 -51 6946 6805 3 1128 1433 294 123 21 chr13 71253462 71254161 -49030151 + Charlie1 DNA MER1_type 1763 2532 -249 3 1128 3611 86 45 0 chr13 71254203 71254690 -49029622 - L1_Mus1 LINE L1 -2 6565 6057 3 1128 469 219 24 32 chr13 71254869 71254992 -49029320 - B3A SINE B2 -76 122 1 3 1128 346 309 95 9 chr13 71255417 71255649 -49028663 - L1M2 LINE L1 -1413 4730 4479 3 1128 187 133 44 0 chr13 71255736 71255781 -49028531 + (TA)n Simple_repeat Simple_repeat 1 47 0 3 1128 557 166 41 0 chr13 71255788 71255957 -49028355 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 3 1128 218 160 20 0 chr13 71255960 71256010 -49028302 + (CAGA)n Simple_repeat Simple_repeat 2 52 0 3 1128 291 258 208 0 chr13 71256020 71256140 -49028172 - RSINE1 SINE B4 -18 147 3 3 1128 314 349 116 30 chr13 71256541 71256842 -49027470 - L1M2 LINE L1 -2281 3859 3533 3 1128 186 276 0 0 chr13 71258060 71258118 -49026194 + (CAGA)n Simple_repeat Simple_repeat 3 60 0 3 1128 1158 224 87 36 chr13 71260654 71261010 -49023302 - ORR1D1 LTR MaLR 0 374 1 3 1128 297 0 0 0 chr13 71261127 71261160 -49023152 + (TC)n Simple_repeat Simple_repeat 2 34 0 3 1128 3662 135 6 56 chr13 71261768 71262444 -49021868 - RLTR26 LTR ERVK 0 642 1 3 1128 23 0 0 0 chr13 71263097 71263120 -49021192 + AT_rich Low_complexity Low_complexity 1 23 0 3 1128 314 131 0 32 chr13 71263406 71263469 -49020843 + GA-rich Low_complexity Low_complexity 4 64 0 3 1128 1085 72 0 7 chr13 71263625 71263778 -49020534 + (TTCC)n Simple_repeat Simple_repeat 4 155 0 3 1128 503 243 10 26 chr13 71263782 71264093 -49020219 + (TG)n Simple_repeat Simple_repeat 1 305 0 3 1128 490 257 0 53 chr13 71263972 71264161 -49020151 + (TATG)n Simple_repeat Simple_repeat 1 179 0 3 1128 247 194 32 21 chr13 71264174 71264269 -49020043 + (TG)n Simple_repeat Simple_repeat 2 97 0 3 1128 201 211 0 37 chr13 71264271 71264325 -49019987 + (TATG)n Simple_repeat Simple_repeat 2 53 0 3 1128 547 287 22 66 chr13 71264325 71264508 -49019804 + RMER20B LTR ERVK 1 175 -452 3 1128 871 76 53 0 chr13 71264849 71265157 -49019155 + (TCTA)n Simple_repeat Simple_repeat 1 324 0 3 1128 450 0 0 0 chr13 71265994 71266044 -49018268 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1128 576 84 0 0 chr13 71267531 71267614 -49016698 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 3 1128 200 94 31 0 chr13 71267615 71267647 -49016665 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 3 1128 37012 56 8 9 chr13 71267712 71273626 -49010686 - L1Md_F3 LINE L1 -4 6578 612 3 1128 279 350 7 0 chr13 71275873 71276013 -49008299 + (CATA)n Simple_repeat Simple_repeat 4 144 0 3 1128 180 0 0 0 chr13 71278539 71278559 -49005753 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1128 259 331 8 24 chr13 71281172 71281296 -49003016 + MLT1D LTR MaLR 73 194 -311 3 1128 588 29 0 0 chr13 71281399 71281469 -49002843 + (TC)n Simple_repeat Simple_repeat 1 70 0 3 1128 215 250 78 0 chr13 71282235 71282299 -49002013 + ID SINE ID 3 71 -153 3 1128 435 222 11 23 chr13 71282400 71282567 -49001745 + (TA)n Simple_repeat Simple_repeat 2 166 0 3 1128 486 75 0 0 chr13 71282567 71282634 -49001678 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1128 435 222 11 23 chr13 71282634 71282641 -49001671 + (TA)n Simple_repeat Simple_repeat 1 7 0 3 1128 571 239 0 0 chr13 71282680 71282793 -49001519 + ID_B1 SINE B4 104 216 -8 3 1128 742 272 0 11 chr13 71285156 71285338 -48998974 + B3 SINE B2 1 180 -36 3 1128 311 298 67 24 chr13 71286095 71286260 -48998052 - MTEa LTR MaLR -4 375 204 3 1128 2027 68 21 4 chr13 71286323 71286602 -48997710 - L1_Mus3 LINE L1 -2 6636 6353 3 1128 2694 74 20 0 chr13 71286603 71286955 -48997357 + L1_Mus3 LINE L1 6008 6366 -272 3 1128 244 308 15 0 chr13 71286960 71287025 -48997287 - MTEa LTR MaLR -235 124 59 3 1128 234 196 0 0 chr13 71287838 71287884 -48996428 + L2a LINE L2 3377 3422 -4 3 1128 486 33 0 0 chr13 71288820 71288880 -48995432 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1128 247 304 144 54 chr13 71290609 71290776 -48993536 + MLT1A LTR MaLR 1 182 -192 3 1128 402 21 0 0 chr13 71291455 71291502 -48992810 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1128 1242 102 0 0 chr13 71292934 71293201 -48991111 + (TG)n Simple_repeat Simple_repeat 1 267 0 3 1128 448 102 0 56 chr13 71293719 71293844 -48990468 + T-rich Low_complexity Low_complexity 1 118 0 3 1128 315 65 0 0 chr13 71294060 71294106 -48990206 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1128 405 0 0 0 chr13 71294106 71294151 -48990161 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1128 356 40 0 20 chr13 71295836 71295887 -48988425 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1128 282 165 82 0 chr13 71295897 71295982 -48988330 + (TCTA)n Simple_repeat Simple_repeat 3 94 0 3 1128 478 191 11 44 chr13 71298570 71298751 -48985561 + (TG)n Simple_repeat Simple_repeat 1 175 0 3 1128 22 0 0 0 chr13 71299185 71299207 -48985105 + AT_rich Low_complexity Low_complexity 1 22 0 3 1128 180 0 0 0 chr13 71299965 71299985 -48984327 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1128 286 319 36 0 chr13 71300803 71300941 -48983371 + B1F SINE Alu 1 143 -6 3 1128 351 0 0 0 chr13 71301336 71301375 -48982937 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 1128 447 68 0 0 chr13 71301375 71301433 -48982879 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1129 1152 179 46 32 chr13 71303540 71303759 -48980553 + URR1A DNA MER1_type 1 222 -4 3 1129 21 0 0 0 chr13 71304275 71304296 -48980016 + AT_rich Low_complexity Low_complexity 1 21 0 3 1129 228 135 0 0 chr13 71304739 71304776 -48979536 + (A)n Simple_repeat Simple_repeat 1 37 0 3 1129 204 196 43 0 chr13 71304817 71304863 -48979449 + CT-rich Low_complexity Low_complexity 3 50 0 3 1129 282 95 0 0 chr13 71305861 71305903 -48978409 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1129 23 0 0 0 chr13 71305937 71305960 -48978352 + AT_rich Low_complexity Low_complexity 1 23 0 3 1129 23 0 0 0 chr13 71306368 71306391 -48977921 + AT_rich Low_complexity Low_complexity 1 23 0 3 1129 651 339 68 25 chr13 71306616 71306982 -48977330 - Lx9 LINE L1 -317 7327 6946 3 1129 1063 325 59 8 chr13 71307106 71307497 -48976815 - Lx9 LINE L1 -703 6941 6531 3 1129 1310 306 73 105 chr13 71307691 71308592 -48975720 - L1M4c LINE L1 -5465 919 48 3 1129 503 347 39 21 chr13 71308797 71309030 -48975282 + MLT1A0 LTR MaLR 2 238 -127 3 1129 374 298 11 0 chr13 71309350 71309444 -48974868 - RSINE1 SINE B4 -69 96 2 3 1129 315 0 0 0 chr13 71310197 71310232 -48974080 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1129 740 269 90 0 chr13 71312217 71312418 -48971894 + ID_B1 SINE B4 1 219 -5 3 1129 2836 104 0 43 chr13 71313432 71313854 -48970458 - MTB_Mm LTR MaLR 0 407 4 3 1129 404 325 93 77 chr13 71314901 71314912 -48969400 - MLT1B LTR MaLR -1 389 379 3 1129 199 54 54 0 chr13 71314912 71314949 -48969363 + (TTG)n Simple_repeat Simple_repeat 2 40 0 3 1129 404 325 93 77 chr13 71314949 71315301 -48969011 - MLT1B LTR MaLR -12 378 20 3 1129 7945 76 6 7 chr13 71315933 71316978 -48967334 - L1_Mus3 LINE L1 -1 6637 5594 3 1129 399 167 2 0 chr13 71316973 71317037 -48967275 + L1_Mm LINE L1 5519 5582 -295 3 1129 1093 171 53 53 chr13 71317731 71317997 -48966315 - Lx9 LINE L1 -66 7578 7313 3 1129 456 0 47 0 chr13 71318497 71318561 -48965751 + (TA)n Simple_repeat Simple_repeat 1 67 0 3 1129 228 230 183 19 chr13 71318723 71318931 -48965381 - Charlie2a DNA MER1_type -379 2482 2241 3 1129 229 275 106 28 chr13 71319032 71319174 -48965138 - Charlie2a DNA MER1_type -1836 1025 873 3 1129 445 304 108 19 chr13 71319377 71319635 -48964677 + RMER5 LTR ERV1 33 313 -221 3 1129 247 275 138 35 chr13 71319656 71319873 -48964439 + ORR1D2 LTR MaLR 60 374 0 3 1129 403 256 65 75 chr13 71319874 71320073 -48964239 + RMER5 LTR ERV1 312 508 -26 3 1129 538 240 53 81 chr13 71321544 71321753 -48962559 + B3 SINE B2 1 203 -13 3 1129 330 225 0 0 chr13 71321754 71321834 -48962478 + (CATA)n Simple_repeat Simple_repeat 4 83 0 3 1129 756 40 65 33 chr13 71321884 71322037 -48962275 + (CATATA)n Simple_repeat Simple_repeat 5 162 0 3 1129 231 36 0 0 chr13 71322125 71322153 -48962159 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1129 248 91 0 22 chr13 71323204 71323249 -48961063 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1129 321 250 7 20 chr13 71323273 71323420 -48960892 + (CATATA)n Simple_repeat Simple_repeat 5 149 0 3 1129 426 39 0 0 chr13 71323422 71323474 -48960838 + (GA)n Simple_repeat Simple_repeat 2 53 0 3 1129 328 101 327 18 chr13 71324425 71324535 -48959777 - B2_Mm2 SINE B2 -5 190 47 3 1129 1200 115 17 0 chr13 71324582 71324756 -48959556 - B2_Mm1t SINE B2 -14 179 3 3 1129 2058 141 22 0 chr13 71325880 71326200 -48958112 + ORR1A2 LTR MaLR 1 327 0 3 1129 198 0 0 0 chr13 71326973 71326995 -48957317 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 1129 1093 55 7 20 chr13 71327380 71327528 -48956784 + B1_Mus2 SINE Alu 2 147 0 3 1129 2449 80 9 3 chr13 71327575 71327903 -48956409 + L1_Mus2 LINE L1 6216 6545 -21 3 1129 30181 113 26 8 chr13 71327908 71333218 -48951094 - L1Md_F LINE L1 -301 5582 177 3 1129 25 75 0 0 chr13 71333376 71333429 -48950883 + AT_rich Low_complexity Low_complexity 1 53 0 3 1129 441 0 0 0 chr13 71333775 71333824 -48950488 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 1129 270 292 27 14 chr13 71335869 71335942 -48948370 + RSINE1 SINE B4 23 96 -69 3 1129 427 248 0 56 chr13 71336066 71336093 -48948219 - ORR1E LTR MaLR -254 105 79 3 1129 1099 267 37 66 chr13 71336093 71336383 -48947929 + ORR1D2 LTR MaLR 1 304 -66 3 1129 189 0 0 0 chr13 71336383 71336404 -48947908 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 3 1129 357 24 0 0 chr13 71336405 71336447 -48947865 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1129 1099 267 37 66 chr13 71336447 71336535 -48947777 + ORR1D2 LTR MaLR 305 370 0 3 1129 427 248 0 56 chr13 71336535 71336614 -48947698 - ORR1E LTR MaLR -281 78 5 3 1129 614 274 6 0 chr13 71336747 71336922 -48947390 - MLT2C1 LTR ERVL -221 176 1 4 1129 267 324 129 14 chr13 71337862 71338009 -48946303 - MLT2B4 LTR ERVL -384 172 9 4 1129 246 192 0 0 chr13 71338707 71338759 -48945553 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1129 664 204 11 0 chr13 71338775 71338951 -48945361 + (CA)n Simple_repeat Simple_repeat 1 178 0 4 1129 784 204 8 4 chr13 71338988 71339249 -48945063 + (CA)n Simple_repeat Simple_repeat 1 262 0 4 1129 493 199 24 6 chr13 71340330 71340497 -48943815 + (TG)n Simple_repeat Simple_repeat 1 170 0 4 1129 536 199 20 4 chr13 71340545 71340789 -48943523 + (TG)n Simple_repeat Simple_repeat 1 247 0 4 1129 297 0 0 0 chr13 71340789 71340822 -48943490 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1129 570 207 26 2 chr13 71340822 71341214 -48943098 + (TG)n Simple_repeat Simple_repeat 1 401 0 4 1129 336 217 0 0 chr13 71341455 71341547 -48942765 + (CA)n Simple_repeat Simple_repeat 2 93 0 4 1129 1219 291 35 78 chr13 71341564 71341802 -48942510 - RCHARR1 DNA MER1_type -275 699 496 4 1129 362 285 298 5 chr13 71341802 71341855 -48942457 - B4 SINE B4 -14 278 225 4 1129 311 0 26 0 chr13 71341855 71341894 -48942418 + (TTTTA)n Simple_repeat Simple_repeat 3 42 0 4 1129 362 285 298 5 chr13 71341894 71342055 -48942257 - B4 SINE B4 -68 224 3 4 1129 1219 291 35 78 chr13 71342055 71342508 -48941804 - RCHARR1 DNA MER1_type -479 495 38 4 1129 369 229 135 18 chr13 71343056 71343167 -48941145 - RSINE1 SINE B4 -40 125 2 4 1129 189 0 0 0 chr13 71344348 71344369 -48939943 + (TC)n Simple_repeat Simple_repeat 1 21 0 4 1129 291 241 0 0 chr13 71344369 71344452 -48939860 + (CA)n Simple_repeat Simple_repeat 2 84 0 4 1129 748 167 0 43 chr13 71344472 71344660 -48939652 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1129 268 43 0 42 chr13 71345601 71345649 -48938663 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 1129 824 114 8 0 chr13 71345665 71345796 -48938516 + (TC)n Simple_repeat Simple_repeat 1 132 0 4 1129 1540 155 257 9 chr13 71347193 71347346 -48936966 + RMER10B LTR ERVL 1 227 -171 4 1129 423 0 0 0 chr13 71347346 71347393 -48936919 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 4 1129 1540 155 257 9 chr13 71347393 71347558 -48936754 + RMER10B LTR ERVL 228 397 -1 4 1129 277 280 13 0 chr13 71347764 71347839 -48936473 - L1MD3 LINE L1 -1209 6786 6711 4 1129 22 80 0 0 chr13 71348280 71348330 -48935982 + AT_rich Low_complexity Low_complexity 1 50 0 4 1129 319 174 23 0 chr13 71349076 71349162 -48935150 + (TA)n Simple_repeat Simple_repeat 2 89 0 4 1129 279 0 0 0 chr13 71349280 71349311 -48935001 + (TA)n Simple_repeat Simple_repeat 1 31 0 4 1129 243 0 0 0 chr13 71349311 71349337 -48934975 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 1129 872 143 0 0 chr13 71349339 71349479 -48934833 - B2_Mm2 SINE B2 -54 141 2 4 1129 423 0 0 0 chr13 71350178 71350225 -48934087 + (TTCC)n Simple_repeat Simple_repeat 2 48 0 4 1129 286 121 30 0 chr13 71350595 71350661 -48933651 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 1129 24 32 0 0 chr13 71350977 71351008 -48933304 + AT_rich Low_complexity Low_complexity 1 31 0 4 1129 717 231 45 17 chr13 71351666 71351842 -48932470 - B3A SINE B2 -16 182 2 4 1129 381 197 42 51 chr13 71352452 71352555 -48931757 + PB1D10 SINE Alu 3 105 -15 4 1129 4504 43 4 0 chr13 71352555 71353088 -48931224 - L1Md_F2 LINE L1 -329 6253 5719 4 1129 2378 70 0 16 chr13 71353088 71353409 -48930903 + L1Md_F2 LINE L1 6257 6572 -10 4 1129 24 0 0 0 chr13 71353516 71353540 -48930772 + AT_rich Low_complexity Low_complexity 1 24 0 4 1129 334 349 78 101 chr13 71353773 71354130 -48930182 + ORR1E LTR MaLR 5 353 -6 4 1129 27 0 0 0 chr13 71354237 71354264 -48930048 + AT_rich Low_complexity Low_complexity 1 27 0 4 1129 364 225 234 21 chr13 71354341 71354486 -48929826 + B3A SINE B2 5 180 -18 4 1129 189 0 0 0 chr13 71355010 71355031 -48929281 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1129 213 300 0 53 chr13 71355482 71355577 -48928735 + (TATG)n Simple_repeat Simple_repeat 4 93 0 4 1129 187 89 43 43 chr13 71360146 71360193 -48924119 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 4 1129 201 121 0 0 chr13 71360762 71360795 -48923517 - MIR SINE MIR -119 143 111 4 1129 797 176 13 8 chr13 71361374 71361609 -48922703 + CT-rich Low_complexity Low_complexity 1 236 0 4 1129 531 0 0 0 chr13 71363381 71363440 -48920872 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1129 267 230 156 12 chr13 71364687 71364779 -48919533 - MTEa LTR MaLR -17 362 256 4 1129 243 257 57 0 chr13 71364911 71364981 -48919331 - MTEa LTR MaLR -279 80 7 4 1129 432 0 0 0 chr13 71369957 71370005 -48914307 + (CA)n Simple_repeat Simple_repeat 2 49 0 4 1129 351 0 0 0 chr13 71370005 71370044 -48914268 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 1129 239 250 108 33 chr13 71370900 71371020 -48913292 + B4A SINE B4 8 136 -156 4 1129 397 308 54 91 chr13 71371427 71371871 -48912441 + RMER20B LTR ERVK 96 579 -48 4 1129 234 0 0 0 chr13 71373252 71373278 -48911034 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1129 1419 303 54 8 chr13 71373730 71374229 -48910083 + Lx8 LINE L1 6823 7344 -129 4 1129 1521 313 63 5 chr13 71375964 71376551 -48907761 + Lx8 LINE L1 6700 7320 -153 4 1129 279 0 0 0 chr13 71376562 71376593 -48907719 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1129 271 239 15 0 chr13 71376593 71376660 -48907652 + RLTR11A LTR ERVK 461 528 0 4 1129 267 31 0 0 chr13 71377067 71377099 -48907213 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1129 2014 148 118 2 chr13 71377099 71377499 -48906813 - RLTR11A LTR ERVK -82 446 1 4 1129 501 17 0 0 chr13 71378774 71378832 -48905480 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 1129 22 0 0 0 chr13 71379452 71379474 -48904838 + AT_rich Low_complexity Low_complexity 1 22 0 4 1129 276 0 68 0 chr13 71379521 71379565 -48904747 + (TTG)n Simple_repeat Simple_repeat 2 48 0 4 1129 527 292 38 38 chr13 71381582 71381767 -48902545 - B3A SINE B2 -13 185 1 4 1129 335 222 5 49 chr13 71381936 71382121 -48902191 + (TG)n Simple_repeat Simple_repeat 1 177 0 4 1129 276 30 0 0 chr13 71382775 71382808 -48901504 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1129 565 229 150 6 chr13 71382832 71382862 -48901450 - B3A SINE B2 -6 192 155 4 1129 465 66 0 0 chr13 71382862 71382923 -48901389 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 1129 565 229 150 6 chr13 71382923 71383059 -48901253 - B3A SINE B2 -44 154 2 4 1129 1031 65 19 13 chr13 71383529 71383686 -48900626 + B2_Mm2 SINE B2 28 185 -10 4 1129 329 285 0 63 chr13 71383691 71383859 -48900453 + RMER17C LTR ERVK 71 231 -179 4 1129 1107 43 0 0 chr13 71383859 71384000 -48900312 + (TC)n Simple_repeat Simple_repeat 2 142 0 4 1129 329 285 0 63 chr13 71384000 71384052 -48900260 + RMER17C LTR ERVK 232 277 -133 4 1129 459 0 0 0 chr13 71385733 71385784 -48898528 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 4 1129 303 85 0 0 chr13 71386149 71386196 -48898116 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 4 1129 2543 113 63 19 chr13 71386555 71386969 -48897343 + Lx2 LINE L1 6554 6985 -12 4 1129 234 0 0 0 chr13 71388044 71388070 -48896242 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1129 297 89 0 0 chr13 71388685 71388730 -48895582 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1129 21 57 0 0 chr13 71389760 71389795 -48894517 + AT_rich Low_complexity Low_complexity 1 35 0 4 1129 24 53 0 0 chr13 71390473 71390511 -48893801 + AT_rich Low_complexity Low_complexity 1 38 0 4 1129 242 281 72 51 chr13 71391163 71391509 -48892803 + L1MC LINE L1 2843 3199 -2947 4 1129 273 331 95 16 chr13 71392640 71392793 -48891519 - MLT1E2 LTR MaLR -188 439 278 4 1129 310 312 53 11 chr13 71392971 71393065 -48891247 - B1F SINE Alu -1 148 51 4 1129 401 333 66 43 chr13 71393521 71393752 -48890560 + B4A SINE B4 6 239 -53 4 1129 357 276 68 47 chr13 71394588 71394778 -48889534 - L1MC LINE L1 -2147 3999 3806 4 1129 183 80 0 0 chr13 71395058 71395083 -48889229 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1129 341 203 139 66 chr13 71395322 71395459 -48888853 + B1F1 SINE Alu 1 147 -2 4 1129 399 250 87 33 chr13 71395459 71395482 -48888830 + ID_B1 SINE B4 85 248 -44 4 1129 340 284 35 44 chr13 71395699 71395813 -48888499 + MTEa LTR MaLR 258 370 -9 4 1129 225 0 0 0 chr13 71395981 71396006 -48888306 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1129 4222 80 15 0 chr13 71396023 71396547 -48887765 - L1_Mus3 LINE L1 0 6638 6107 4 1129 335 278 6 0 chr13 71396682 71396858 -48887454 + (TG)n Simple_repeat Simple_repeat 2 178 0 4 1129 410 0 20 0 chr13 71397571 71397621 -48886691 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1129 684 67 0 0 chr13 71397621 71397710 -48886602 + (GA)n Simple_repeat Simple_repeat 1 90 0 4 1129 4077 100 30 21 chr13 71397801 71398432 -48885880 + RMER17B LTR ERVK 1 637 -321 4 1129 371 259 102 65 chr13 71398514 71398729 -48885583 + L1M3 LINE L1 5306 5528 -661 4 1129 1173 70 0 0 chr13 71398744 71398900 -48885412 + (GA)n Simple_repeat Simple_repeat 1 156 0 4 1129 320 292 179 12 chr13 71398988 71399161 -48885151 - MLT2B2 LTR ERVL -134 381 180 4 1129 1651 213 90 13 chr13 71399202 71399578 -48884734 + MTD LTR MaLR 1 405 -14 4 1129 342 159 108 58 chr13 71400837 71400957 -48883355 - Lx9 LINE L1 0 7644 7519 4 1129 616 70 38 23 chr13 71400958 71401090 -48883222 + (TA)n Simple_repeat Simple_repeat 2 135 0 4 1129 914 154 104 23 chr13 71403449 71403622 -48880690 - B2_Mm2 SINE B2 -8 187 1 4 1129 322 377 9 17 chr13 71403909 71404005 -48880307 + PB1D7 SINE Alu 6 100 -20 4 1129 4431 89 23 7 chr13 71404005 71404580 -48879732 - MT2B2 LTR ERVL 0 584 1 4 1129 322 377 9 17 chr13 71404580 71404599 -48879713 + PB1D7 SINE Alu 101 119 -1 4 1129 372 147 0 0 chr13 71404599 71404674 -48879638 + (CAAAC)n Simple_repeat Simple_repeat 5 79 0 4 1129 22 35 0 0 chr13 71405562 71405591 -48878721 + AT_rich Low_complexity Low_complexity 1 29 0 4 1129 1014 229 44 0 chr13 71406768 71406973 -48877339 - B3 SINE B2 -1 215 2 4 1129 390 21 0 0 chr13 71407245 71407292 -48877020 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1129 385 355 70 13 chr13 71407424 71407724 -48876588 - L1MEc LINE L1 -5597 803 487 4 1129 2296 141 18 0 chr13 71407732 71408066 -48876246 - Lx4A LINE L1 -2 7056 6717 4 1129 198 0 0 0 chr13 71408482 71408504 -48875808 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1129 24 0 0 0 chr13 71409027 71409051 -48875261 + AT_rich Low_complexity Low_complexity 1 24 0 5 1129 1337 158 18 13 chr13 71410248 71410472 -48873840 - URR1B DNA MER1_type 0 225 1 5 1129 411 245 146 48 chr13 71411593 71411860 -48872452 - MTEa LTR MaLR 0 379 35 5 1129 2375 189 59 51 chr13 71411860 71412385 -48871927 + RLTR24 LTR ERV1 1 529 0 5 1129 261 268 13 66 chr13 71412385 71412410 -48871902 - MTEa LTR MaLR -325 34 13 5 1129 387 0 0 0 chr13 71412756 71412799 -48871513 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1129 223 169 15 30 chr13 71412946 71413013 -48871299 + T-rich Low_complexity Low_complexity 2 67 0 5 1129 261 0 0 0 chr13 71413474 71413503 -48870809 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1129 342 0 0 0 chr13 71413673 71413711 -48870601 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 5 1129 182 118 29 0 chr13 71414022 71414056 -48870256 + (TAGA)n Simple_repeat Simple_repeat 3 37 0 5 1129 25 0 0 0 chr13 71414121 71414146 -48870166 + AT_rich Low_complexity Low_complexity 1 25 0 5 1129 1279 48 0 0 chr13 71414595 71414740 -48869572 + B1_Mus2 SINE Alu 3 147 0 5 1129 207 0 0 0 chr13 71415197 71415220 -48869092 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1129 450 36 0 0 chr13 71416413 71416469 -48867843 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1129 429 206 80 45 chr13 71416588 71416700 -48867612 - B1_Mur2 SINE Alu -1 148 33 5 1129 333 0 0 0 chr13 71417447 71417484 -48866828 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1129 1035 259 197 6 chr13 71417959 71418289 -48866023 - MTD LTR MaLR -21 398 6 5 1129 684 293 65 56 chr13 71418468 71418711 -48865601 - MLT1A0 LTR MaLR -22 343 101 5 1129 3076 74 35 15 chr13 71418711 71419110 -48865202 - MTB_Mm LTR MaLR 0 407 1 5 1129 684 293 65 56 chr13 71419110 71419206 -48865106 - MLT1A0 LTR MaLR -265 100 1 5 1129 697 225 65 38 chr13 71420078 71420263 -48864049 + ORR1D1 LTR MaLR 1 190 -184 5 1129 332 179 0 13 chr13 71420269 71420348 -48863964 + CT-rich Low_complexity Low_complexity 1 78 0 5 1129 748 194 136 35 chr13 71420349 71420547 -48863765 + ORR1D1 LTR MaLR 157 374 0 5 1129 201 74 0 0 chr13 71420645 71420672 -48863640 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1129 224 200 17 0 chr13 71421212 71421272 -48863040 + (TA)n Simple_repeat Simple_repeat 1 61 0 5 1129 194 62 31 0 chr13 71421414 71421446 -48862866 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 5 1129 1322 266 45 6 chr13 71421455 71421810 -48862502 + MTD LTR MaLR 37 405 -14 5 1129 412 279 57 16 chr13 71423113 71423237 -48861075 + Lx8 LINE L1 6943 7071 -402 5 1129 419 305 48 10 chr13 71423388 71423649 -48860663 + RMER15 LTR ERVL 276 572 -3 5 1129 2309 92 13 0 chr13 71424238 71424553 -48859759 + ORR1A2 LTR MaLR 1 319 -8 5 1129 799 264 64 34 chr13 71424781 71424985 -48859327 + B3 SINE B2 1 210 -6 5 1129 308 218 82 82 chr13 71425398 71425568 -48858744 - RLTR15 LTR ERVK -21 338 169 5 1129 396 256 25 25 chr13 71425574 71425694 -48858618 - L1MA4A LINE L1 -373 5930 5811 5 1129 857 104 11 44 chr13 71425710 71425891 -48858421 + (TCTA)n Simple_repeat Simple_repeat 2 176 0 5 1129 414 0 0 0 chr13 71425891 71425937 -48858375 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1129 657 162 0 0 chr13 71425940 71426039 -48858273 + RMER6D LTR ERVK 11 109 -611 5 1129 483 23 5 116 chr13 71426063 71426261 -48858051 + (TTTTTG)n Simple_repeat Simple_repeat 4 179 0 5 1129 1231 68 0 0 chr13 71426263 71426409 -48857903 - B1_Mus2 SINE Alu -1 146 1 5 1129 354 164 0 0 chr13 71426409 71426470 -48857842 + RMER6D LTR ERVK 101 161 -559 5 1129 600 134 0 0 chr13 71426476 71426573 -48857739 + (TTTTC)n Simple_repeat Simple_repeat 4 100 0 5 1129 485 201 33 44 chr13 71426573 71426755 -48857557 - RMER17C LTR ERVK -138 272 93 5 1129 2947 171 37 12 chr13 71426754 71427318 -48856994 + RMER6D LTR ERVK 143 720 0 5 1129 367 302 27 72 chr13 71428704 71428925 -48855387 + B3 SINE B2 3 213 -3 5 1129 1577 261 117 22 chr13 71429093 71429612 -48854700 - Lx6 LINE L1 -27 7433 6484 5 1129 626 95 0 10 chr13 71429692 71429788 -48854524 + (TTCC)n Simple_repeat Simple_repeat 3 97 0 5 1129 718 215 81 30 chr13 71429790 71429987 -48854325 - B3 SINE B2 -1 215 9 5 1129 626 287 60 56 chr13 71430012 71430296 -48854016 - Lx5 LINE L1 0 7050 6766 5 1129 229 298 107 0 chr13 71430378 71430499 -48853813 - L1MEc LINE L1 -1486 4833 4700 5 1129 662 284 95 30 chr13 71430556 71430930 -48853382 - L1MA5 LINE L1 -23 6277 5873 5 1129 1909 59 0 8 chr13 71431053 71431291 -48853021 - L1Md_F2 LINE L1 -7 6575 6340 5 1129 1960 54 4 0 chr13 71431291 71431531 -48852781 + L1Md_F2 LINE L1 6071 6311 -271 5 1129 226 232 221 21 chr13 71431641 71431786 -48852526 - L1MEc LINE L1 -4171 2229 2056 5 1129 691 225 28 213 chr13 71431894 71432221 -48852091 - ORR1A2 LTR MaLR 0 379 122 5 1129 342 287 92 0 chr13 71432227 71432401 -48851911 - L1_Rod LINE L1 -1 5846 5657 5 1129 2909 87 63 28 chr13 71433780 71434207 -48850105 - L1_Mus4 LINE L1 -1 6635 6194 5 141 1307 84 0 55 chr13 71434207 71434409 -48849903 + L1_Mus4 LINE L1 5847 6037 -599 5 1130 344 163 194 0 chr13 71436326 71436424 -48847888 - Lx9 LINE L1 -8 7636 7520 5 1130 234 0 0 0 chr13 71436424 71436450 -48847862 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1130 4427 172 48 18 chr13 71436454 71437380 -48846932 - ORR1A2-int LTR MaLR -839 953 1 5 1130 1892 114 40 64 chr13 71437384 71437711 -48846601 - ORR1A2 LTR MaLR -8 319 1 5 1130 617 342 43 5 chr13 71437717 71437898 -48846414 + B4A SINE B4 5 192 -100 5 1130 808 257 45 57 chr13 71437898 71438341 -48845971 + RLTR15 LTR ERVK 1 350 -9 5 1130 303 288 0 0 chr13 71438344 71438417 -48845895 + B4A SINE B4 193 265 -27 5 1130 538 321 31 10 chr13 71438515 71438707 -48845605 + RMER30 DNA MER1_type 5 200 -2 5 1130 390 181 110 17 chr13 71439227 71439345 -48844967 - Lx9 LINE L1 -5 7639 7511 5 1130 213 36 0 0 chr13 71440050 71440063 -48844249 + (TA)n Simple_repeat Simple_repeat 1 13 0 5 1130 453 36 0 0 chr13 71440063 71440118 -48844194 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1130 213 36 0 0 chr13 71440118 71440132 -48844180 + (TA)n Simple_repeat Simple_repeat 1 14 0 5 1130 180 0 0 0 chr13 71440741 71440761 -48843551 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1130 1509 60 33 0 chr13 71441955 71442138 -48842174 - B2_Mm2 SINE B2 -5 190 2 5 1130 391 276 268 7 chr13 71442190 71442332 -48841980 - B3A SINE B2 -19 179 1 5 1130 1495 121 204 0 chr13 71442593 71442857 -48841455 - ORR1A2 LTR MaLR -9 318 1 5 1130 797 94 18 24 chr13 71444627 71444791 -48839521 + (TA)n Simple_repeat Simple_repeat 2 164 0 5 1130 931 269 129 59 chr13 71444811 71445097 -48839215 - Lx9 LINE L1 -239 7405 7077 5 1130 3010 71 12 15 chr13 71445097 71445498 -48838814 + MTA_Mm LTR MaLR 1 400 0 5 1130 8502 55 18 2 chr13 71445498 71446579 -48837733 + MTA_Mm-int LTR MaLR 1 1098 0 5 1130 3088 73 2 5 chr13 71446579 71446976 -48837336 + MTA_Mm LTR MaLR 1 396 0 5 1130 931 269 129 59 chr13 71446976 71447058 -48837254 - Lx9 LINE L1 -568 7076 7011 5 1130 1539 274 74 33 chr13 71447035 71447521 -48836791 + Lx9 LINE L1 6504 7009 -635 5 1130 207 0 0 0 chr13 71447554 71447577 -48836735 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1130 377 293 54 141 chr13 71448536 71448834 -48835478 + MLT1B LTR MaLR 114 385 -5 5 1130 9263 168 47 8 chr13 71449290 71451557 -48832755 + L1VL4 LINE L1 802 3142 -772 5 1130 37694 31 5 19 chr13 71451556 71453636 -48830676 + L1Md_A LINE L1 360 2406 -3477 5 1130 3677 42 5 2 chr13 71453636 71454071 -48830241 + RLTR10C LTR ERVK 1 436 0 5 1130 37694 22 1 2 chr13 71454071 71457252 -48827060 + L1Md_A LINE L1 2407 5586 -297 5 1130 8546 30 6 0 chr13 71457252 71458242 -48826070 + L1Md_A LINE L1 5587 6582 0 5 1130 1616 119 31 0 chr13 71458242 71458503 -48825809 + L1VL4 LINE L1 3134 3402 -2484 5 1130 6307 184 67 22 chr13 71458507 71459925 -48824387 + Lx2B LINE L1 5499 6989 -11 5 1130 438 349 84 13 chr13 71460045 71460353 -48823959 - ORR1E LTR MaLR -10 349 20 5 1130 370 343 67 40 chr13 71461006 71461155 -48823157 + ID_B1 SINE B4 18 170 -54 5 1130 369 0 0 0 chr13 71461980 71462021 -48822291 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1130 315 0 0 0 chr13 71462021 71462055 -48822257 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1130 352 263 6 6 chr13 71462075 71462255 -48822057 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1130 317 261 22 0 chr13 71462261 71462353 -48821959 + (CATA)n Simple_repeat Simple_repeat 3 96 0 5 1130 321 255 0 0 chr13 71462380 71462537 -48821775 + (CA)n Simple_repeat Simple_repeat 2 158 0 5 1130 300 282 12 0 chr13 71462570 71462655 -48821657 + (CA)n Simple_repeat Simple_repeat 1 86 0 5 1130 232 194 56 0 chr13 71463839 71463911 -48820401 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 5 1130 438 69 0 0 chr13 71466233 71466291 -48818021 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1130 696 157 0 0 chr13 71466291 71466457 -48817855 + GA-rich Low_complexity Low_complexity 2 167 0 5 1130 405 338 77 63 chr13 71466464 71466751 -48817561 - B4 SINE B4 0 292 2 5 1130 302 241 48 51 chr13 71467364 71467524 -48816788 + RLTR8 LTR ERVK 221 410 -27 5 1130 297 274 0 0 chr13 71467945 71468062 -48816250 + (TATATG)n Simple_repeat Simple_repeat 6 122 0 5 1130 267 169 0 84 chr13 71470903 71470974 -48813338 - MLT1C LTR MaLR -330 137 73 5 1130 233 329 0 12 chr13 71471154 71471237 -48813075 - ID4_ SINE ID 0 83 2 5 1130 201 314 59 0 chr13 71471858 71471960 -48812352 - L2b LINE L2 -2 3373 3266 5 1130 419 94 0 0 chr13 71472980 71473033 -48811279 + Lx8 LINE L1 7073 7125 -348 5 1130 372 243 83 113 chr13 71473030 71473283 -48811029 + Lx9 LINE L1 7383 7629 -15 5 1130 3068 63 25 12 chr13 71473283 71473685 -48810627 - MTB_Mm LTR MaLR 0 407 1 5 1130 372 243 83 113 chr13 71473685 71473696 -48810616 + Lx9 LINE L1 7630 7638 -6 5 1130 507 345 0 0 chr13 71473705 71473847 -48810465 + Lx8 LINE L1 7121 7262 -211 5 1130 237 65 0 0 chr13 71474645 71474676 -48809636 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1130 374 343 26 106 chr13 71474676 71474865 -48809447 - B4A SINE B4 -26 266 93 5 1130 1369 98 11 0 chr13 71475259 71475443 -48808869 - B2_Mm2 SINE B2 -7 188 3 5 1130 275 343 9 19 chr13 71476326 71476433 -48807879 - ID_B1 SINE B4 -1 223 118 5 1130 2082 146 42 74 chr13 71478802 71479209 -48805103 - ORR1B1 LTR MaLR 0 394 1 5 1130 1760 244 48 23 chr13 71480006 71480489 -48803823 + RMER20A LTR ERVK 22 516 0 5 1130 815 241 46 5 chr13 71480683 71480879 -48803433 - Lx5 LINE L1 -1029 6021 5818 5 1130 1044 274 67 31 chr13 71480886 71481213 -48803099 + Lx6 LINE L1 7096 7434 -26 5 1130 1680 196 30 72 chr13 71481275 71481676 -48802636 + ORR1C2 LTR MaLR 1 384 0 5 1130 41800 7 1 1 chr13 71482502 71489343 -48794969 - L1Md_A LINE L1 0 6582 1 5 1130 227 305 163 52 chr13 71491657 71492006 -48792306 - L1ME2z LINE L1 -414 6030 5643 6 1130 189 0 0 0 chr13 71492189 71492210 -48792102 + (TTTTTG)n Simple_repeat Simple_repeat 6 26 0 6 1130 1184 68 0 0 chr13 71492210 71492358 -48791954 - B1_Mus1 SINE Alu 0 148 1 6 1130 863 287 65 39 chr13 71492434 71492742 -48791570 + MTD LTR MaLR 91 406 -13 6 1130 2690 166 0 2 chr13 71493530 71493952 -48790360 + MTC LTR MaLR 1 421 0 6 1130 450 0 0 0 chr13 71494110 71494160 -48790152 + (TA)n Simple_repeat Simple_repeat 1 50 0 6 1130 591 150 33 8 chr13 71494179 71494300 -48790012 + Lx2A1 LINE L1 6880 7003 -5 6 1130 486 169 0 0 chr13 71495775 71495864 -48788448 + (TA)n Simple_repeat Simple_repeat 1 89 0 6 1130 314 204 45 0 chr13 71496364 71496452 -48787860 - Lx9 LINE L1 -1 7643 7552 6 1130 1686 243 86 0 chr13 71496475 71496927 -48787385 - Lx9 LINE L1 -147 7497 7007 6 1130 236 291 76 17 chr13 71497173 71497241 -48787071 - MTEa LTR MaLR 0 379 305 6 1130 450 0 0 0 chr13 71497241 71497291 -48787021 + (TTTTA)n Simple_repeat Simple_repeat 4 53 0 6 1130 236 291 76 17 chr13 71497291 71497341 -48786971 - MTEa LTR MaLR -75 304 254 6 1130 434 253 47 41 chr13 71497341 71497510 -48786802 + L1M2 LINE L1 2400 2569 -4280 6 1130 1960 285 120 31 chr13 71497828 71499071 -48785241 + L1M2 LINE L1 2973 4326 -2516 6 1130 609 311 26 15 chr13 71499385 71499649 -48784663 + L1MD3 LINE L1 7693 7959 -36 6 1130 845 292 99 5 chr13 71500000 71500161 -48784151 - L1MA6 LINE L1 -474 5826 5644 1 1130 471 35 0 0 chr13 71500161 71500218 -48784094 + (TA)n Simple_repeat Simple_repeat 1 57 0 2 1130 845 292 99 5 chr13 71500218 71500428 -48783884 - L1MA6 LINE L1 -657 5643 5421 1 1130 378 0 0 0 chr13 71500976 71501018 -48783294 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1130 24 0 0 0 chr13 71501765 71501789 -48782523 + AT_rich Low_complexity Low_complexity 1 24 0 4 1130 405 0 0 0 chr13 71502319 71502364 -48781948 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1130 454 348 37 23 chr13 71502716 71502931 -48781381 - RMER15 LTR ERVL -2 573 356 6 1130 2630 114 36 19 chr13 71503662 71504081 -48780231 + Lx LINE L1 6229 6654 0 7 1130 469 31 0 0 chr13 71506387 71506451 -48777861 + L1_Mus2 LINE L1 6503 6566 0 8 1130 895 57 32 0 chr13 71507233 71507357 -48776955 + L1Md_F2 LINE L1 6443 6570 -12 9 1130 396 0 0 0 chr13 71507532 71507576 -48776736 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1130 450 0 0 0 chr13 71507576 71507625 -48776687 + (GA)n Simple_repeat Simple_repeat 2 51 0 1 1130 531 0 0 0 chr13 71508246 71508305 -48776007 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1130 315 0 0 0 chr13 71508305 71508339 -48775973 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1130 376 250 92 25 chr13 71508369 71508488 -48775824 - B3A SINE B2 -65 133 7 1 1130 2434 208 51 20 chr13 71509481 71510074 -48774238 - Lx9 LINE L1 -1 7643 7033 1 1130 199 106 42 21 chr13 71510086 71510134 -48774178 + A-rich Low_complexity Low_complexity 4 52 0 1 1130 326 349 7 50 chr13 71510823 71510929 -48773383 - B1F SINE Alu -15 134 32 1 1130 2892 35 18 6 chr13 71510929 71511271 -48773041 - ORR1A0 LTR MaLR 0 346 1 1 1130 326 349 7 50 chr13 71511271 71511303 -48773009 - B1F SINE Alu -118 31 2 1 1130 488 312 22 0 chr13 71511415 71511553 -48772759 - ID_B1 SINE B4 -1 223 83 1 1130 225 0 0 0 chr13 71514084 71514109 -48770203 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 2 1130 22 0 0 0 chr13 71516987 71517009 -48767303 + AT_rich Low_complexity Low_complexity 1 22 0 2 1130 343 295 88 9 chr13 71519396 71519509 -48764803 + B4 SINE B4 2 123 -169 2 1130 459 199 0 33 chr13 71519688 71519839 -48764473 + (CATA)n Simple_repeat Simple_repeat 1 146 0 2 1130 432 218 23 12 chr13 71519905 71520077 -48764235 + (CATA)n Simple_repeat Simple_repeat 2 175 0 2 1130 338 194 14 0 chr13 71520079 71520151 -48764161 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 1130 35981 44 8 4 chr13 71520292 71525729 -48758583 + L1Md_T LINE L1 30 5589 -297 2 1130 8634 32 0 0 chr13 71525729 71526725 -48757587 + L1Md_T LINE L1 5590 6585 0 2 1130 259 232 28 21 chr13 71526977 71527122 -48757190 + (CATA)n Simple_repeat Simple_repeat 1 146 0 2 1130 523 320 60 4 chr13 71527707 71527939 -48756373 - 7SK RNA RNA -86 245 1 2 1130 661 297 204 3 chr13 71528011 71528325 -48755987 + MTE2b LTR MaLR 1 377 -2 2 1130 292 223 204 0 chr13 71529492 71529595 -48754717 + B1F1 SINE Alu 25 148 -1 3 1130 251 261 0 28 chr13 71529994 71530065 -48754247 + (CATA)n Simple_repeat Simple_repeat 1 69 0 3 1130 444 150 0 0 chr13 71530090 71530170 -48754142 + (CA)n Simple_repeat Simple_repeat 1 80 0 3 1130 811 161 0 27 chr13 71531017 71531202 -48753110 + CT-rich Low_complexity Low_complexity 1 180 0 3 1130 238 242 98 0 chr13 71531358 71531437 -48752875 + PB1D10 SINE Alu 4 97 -52 3 1130 382 132 13 13 chr13 71531444 71531521 -48752791 + GA-rich Low_complexity Low_complexity 3 79 0 3 1130 184 123 13 52 chr13 71532328 71532405 -48751907 + (TTAA)n Simple_repeat Simple_repeat 4 77 0 3 1130 732 121 0 0 chr13 71534799 71534940 -48749372 + (GA)n Simple_repeat Simple_repeat 2 142 0 3 1130 279 0 0 0 chr13 71535707 71535738 -48748574 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1130 279 0 0 0 chr13 71536519 71536550 -48747762 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1130 2397 89 125 3 chr13 71537051 71537412 -48746900 - MTB_Mm LTR MaLR 0 407 3 4 1130 207 0 0 0 chr13 71540929 71540952 -48743360 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1130 549 271 97 0 chr13 71541536 71541680 -48742632 + RSINE1 SINE B4 4 161 -4 4 1130 219 36 0 0 chr13 71541997 71542025 -48742287 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 4 1130 252 77 0 0 chr13 71544042 71544081 -48740231 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1130 1080 72 0 0 chr13 71544261 71544399 -48739913 + B1_Mus1 SINE Alu 1 138 -10 4 1130 198 0 0 0 chr13 71544805 71544827 -48739485 + (TG)n Simple_repeat Simple_repeat 2 23 0 4 1130 1343 57 6 0 chr13 71545267 71545444 -48738868 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 4 1130 408 40 0 0 chr13 71545457 71545507 -48738805 + (TC)n Simple_repeat Simple_repeat 2 51 0 4 1130 2850 48 17 0 chr13 71545508 71545860 -48738452 - L1_Mus1 LINE L1 0 6567 6210 4 1130 1243 78 3 1 chr13 71545861 71546025 -48738287 + L1_Mus1 LINE L1 6034 6179 -388 4 1130 1242 100 0 0 chr13 71546454 71546634 -48737678 + (GAA)n Simple_repeat Simple_repeat 1 180 0 5 1130 527 300 44 126 chr13 71547113 71547403 -48736909 + ORR1E LTR MaLR 3 268 -91 5 1130 2226 4 0 0 chr13 71547403 71547647 -48736665 + L1Md_A LINE L1 6339 6582 0 5 1130 527 300 44 126 chr13 71547647 71547745 -48736567 + ORR1E LTR MaLR 269 359 0 5 1130 258 107 54 0 chr13 71549830 71549886 -48734426 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1130 616 265 71 10 chr13 71551892 71552090 -48732222 - ORR1D2 LTR MaLR -2 368 159 5 1130 419 287 189 6 chr13 71552119 71552294 -48732018 - MTEa LTR MaLR -147 232 26 5 1130 323 71 0 0 chr13 71552435 71552477 -48731835 - L1_Mus2 LINE L1 -250 6316 6275 5 1130 1825 79 7 53 chr13 71552477 71552759 -48731553 + L1_Mus2 LINE L1 6296 6564 -2 5 1130 183 80 0 0 chr13 71552800 71552825 -48731487 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1130 3630 55 13 0 chr13 71553692 71554145 -48730167 - L1_Mus1 LINE L1 -522 6045 5587 5 1130 3972 63 49 0 chr13 71554145 71554656 -48729656 + L1_Mus1 LINE L1 6025 6560 -7 5 1130 336 256 93 43 chr13 71555006 71555187 -48729125 + MLT1A-int LTR MaLR 2 180 -1555 5 1130 311 390 5 50 chr13 71555159 71555380 -48728932 + MLT1A-int LTR MaLR 300 510 -861 5 1130 463 126 21 0 chr13 71555456 71555551 -48728761 + (CA)n Simple_repeat Simple_repeat 1 97 0 5 1130 474 18 0 0 chr13 71555551 71555606 -48728706 + (GA)n Simple_repeat Simple_repeat 2 56 0 6 1130 235 325 215 16 chr13 71556031 71556338 -48727974 + MLT1A-int LTR MaLR 988 1355 -16 5 1130 269 359 43 61 chr13 71556451 71556614 -48727698 + MLT1A LTR MaLR 118 277 -97 5 1130 1354 175 88 10 chr13 71557960 71558255 -48726057 - ORR1B2 LTR MaLR -6 361 44 6 1130 232 247 0 90 chr13 71558266 71558355 -48725957 - ORR1A1 LTR MaLR -234 112 32 6 1130 467 227 35 21 chr13 71558543 71558687 -48725625 - ORR1B1 LTR MaLR -248 146 1 6 1130 331 253 24 0 chr13 71559936 71560019 -48724293 - B1_Mur2 SINE Alu 0 149 65 6 1130 339 267 67 0 chr13 71560015 71560105 -48724207 - B1F SINE Alu -23 126 31 6 1130 1284 249 111 14 chr13 71560282 71560443 -48723869 - MTD LTR MaLR -3 416 237 6 1130 6265 45 25 3 chr13 71560443 71561209 -48723103 - L1Md_F2 LINE L1 0 6582 5800 6 1130 1284 249 111 14 chr13 71561209 71561418 -48722894 - MTD LTR MaLR -183 236 10 6 1130 214 293 17 0 chr13 71561798 71561856 -48722456 + PB1D10 SINE Alu 19 77 -40 6 1130 1793 5 0 10 chr13 71563389 71563598 -48720714 + L1Md_T LINE L1 6376 6582 0 6 1130 10965 22 0 1 chr13 71563964 71565215 -48719097 + L1_Mm LINE L1 4616 5865 -18 7 1131 2268 0 0 0 chr13 71565853 71566101 -48718211 + L1Md_T LINE L1 6335 6582 0 7 1131 450 0 0 0 chr13 71566298 71566348 -48717964 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1131 409 362 7 21 chr13 71566404 71566548 -48717764 + RSINE1 SINE B4 4 145 -20 7 1131 330 26 0 0 chr13 71566560 71566599 -48717713 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1131 3921 36 3 0 chr13 71567310 71567836 -48716476 + L1Md_T LINE L1 1 552 -5970 7 1131 30008 38 1 2 chr13 71567936 71571566 -48712746 + L1Md_T LINE L1 1965 5589 -297 7 1131 9152 6 0 0 chr13 71571566 71572562 -48711750 + L1Md_T LINE L1 5590 6585 0 7 1131 295 233 0 76 chr13 71572696 71572775 -48711537 + ID4_ SINE ID 2 74 -9 7 1131 216 0 0 0 chr13 71575715 71575739 -48708573 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1131 271 310 49 20 chr13 71576367 71576469 -48707843 - PB1D10 SINE Alu -10 107 3 7 1131 1434 247 52 25 chr13 71579264 71579671 -48704641 - MTD LTR MaLR 0 419 2 7 1131 303 258 0 15 chr13 71580321 71580388 -48703924 + PB1D10 SINE Alu 19 84 -33 8 1131 1475 84 131 0 chr13 71581945 71582210 -48702102 - L1_Mus4 LINE L1 -27 5859 5522 8 1131 3755 97 6 4 chr13 71582210 71582737 -48701575 + L1_Mus4 LINE L1 6098 6625 -11 8 1131 819 174 0 0 chr13 71583670 71583848 -48700464 + (TG)n Simple_repeat Simple_repeat 1 178 0 8 1131 545 190 6 0 chr13 71583888 71584062 -48700250 + (TG)n Simple_repeat Simple_repeat 2 176 0 8 1131 804 299 84 56 chr13 71584083 71584367 -48699945 - B4A SINE B4 0 292 1 8 1131 1817 105 14 130 chr13 71588390 71588751 -48695561 + ORR1A2 LTR MaLR 1 319 -8 8 1131 189 0 0 0 chr13 71592172 71592193 -48692119 + (GA)n Simple_repeat Simple_repeat 1 21 0 8 1131 24 0 0 0 chr13 71592696 71592720 -48691592 + AT_rich Low_complexity Low_complexity 1 24 0 8 1131 389 615 0 0 chr13 71594564 71594743 -48689569 + polypyrimidine Low_complexity Low_complexity 2 180 0 8 1131 260 216 0 22 chr13 71595041 71595131 -48689181 + RMER17C LTR ERVK 184 271 -139 8 1131 344 277 104 30 chr13 71595195 71595329 -48688983 + B3A SINE B2 1 144 -54 9 1131 360 0 0 0 chr13 71595750 71595790 -48688522 + (CA)n Simple_repeat Simple_repeat 2 41 0 9 1131 222 200 0 0 chr13 71597159 71597209 -48687103 + (TGGG)n Simple_repeat Simple_repeat 1 50 0 9 1131 273 287 0 17 chr13 71598146 71598193 -48686119 + T-rich Low_complexity Low_complexity 69 115 0 9 1131 1671 127 25 0 chr13 71598193 71598468 -48685844 - Lx2 LINE L1 0 6997 6716 9 1131 273 287 0 17 chr13 71598468 71598537 -48685775 + T-rich Low_complexity Low_complexity 1 68 0 9 1131 274 17 49 49 chr13 71598547 71598608 -48685704 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 9 1131 401 348 9 33 chr13 71599196 71599410 -48684902 + Lx8 LINE L1 7133 7341 -132 9 1131 610 255 174 0 chr13 71599510 71599722 -48684590 - ORR1D2 LTR MaLR 0 370 122 9 1131 1557 275 73 44 chr13 71600359 71601044 -48683268 + Lx9 LINE L1 6864 7568 -76 9 1131 407 208 98 16 chr13 71601239 71601361 -48682951 - ORR1D2 LTR MaLR -221 138 7 9 1131 1709 227 53 5 chr13 71602399 71602797 -48681515 - MTD LTR MaLR 0 419 3 1 1131 2895 201 38 5 chr13 71603229 71603785 -48680527 - Lx5 LINE L1 0 7050 6477 1 1131 284 256 143 0 chr13 71604203 71604300 -48680012 - PB1D9 SINE Alu -6 114 6 1 1131 735 12 0 0 chr13 71604758 71604842 -48679470 + (CA)n Simple_repeat Simple_repeat 2 85 0 1 1131 1948 162 36 0 chr13 71605026 71605360 -48678952 + ORR1A1 LTR MaLR 1 346 0 1 1131 3597 149 38 12 chr13 71605427 71606033 -48678279 - Lx5 LINE L1 -102 5775 5154 1 1131 6273 193 30 13 chr13 71606033 71607300 -48677012 + Lx5 LINE L1 5754 7041 -9 1 1131 210 245 0 20 chr13 71608186 71608236 -48676076 + GA-rich Low_complexity Low_complexity 3 51 0 1 1131 231 254 0 73 chr13 71608363 71608431 -48675881 + RSINE1 SINE B4 83 145 -20 1 1131 463 171 0 19 chr13 71608806 71608913 -48675399 + (CATA)n Simple_repeat Simple_repeat 3 107 0 1 1131 240 192 0 0 chr13 71609163 71609215 -48675097 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1 1131 279 157 0 0 chr13 71611809 71611860 -48672452 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1131 21 0 0 0 chr13 71612967 71612988 -48671324 + AT_rich Low_complexity Low_complexity 1 21 0 1 1131 21 0 0 0 chr13 71613489 71613510 -48670802 + AT_rich Low_complexity Low_complexity 1 21 0 1 1131 188 57 17 86 chr13 71613697 71613755 -48670557 + A-rich Low_complexity Low_complexity 2 55 0 1 1131 314 311 45 62 chr13 71613922 71614241 -48670071 - MLT1A1 LTR MaLR -21 387 43 1 1131 21 36 0 0 chr13 71615595 71615623 -48668689 + AT_rich Low_complexity Low_complexity 1 28 0 1 1131 695 310 25 11 chr13 71615839 71616113 -48668199 + B4 SINE B4 1 278 -14 1 1131 186 43 0 0 chr13 71616501 71616524 -48667788 + (GGCTG)n Simple_repeat Simple_repeat 4 26 0 1 1131 837 138 0 0 chr13 71616624 71616871 -48667441 + (TC)n Simple_repeat Simple_repeat 1 247 0 1 1131 423 0 0 0 chr13 71616871 71616918 -48667394 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1131 311 337 112 24 chr13 71618143 71618392 -48665920 - MLT1A LTR MaLR -84 290 20 1 1131 255 306 0 0 chr13 71622167 71622239 -48662073 + RMER15 LTR ERVL 398 469 -106 1 1131 488 59 15 0 chr13 71622456 71622524 -48661788 + (CATA)n Simple_repeat Simple_repeat 4 72 0 1 1131 491 31 15 0 chr13 71622656 71622721 -48661591 + (GA)n Simple_repeat Simple_repeat 1 66 0 1 1131 228 239 105 44 chr13 71622805 71622856 -48661456 + L1_Rod LINE L1 5703 5757 -90 1 1131 267 21 85 0 chr13 71622856 71622903 -48661409 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1 1131 228 239 105 44 chr13 71622903 71622965 -48661347 + L1_Rod LINE L1 5758 5823 -24 1 1131 386 233 5 9 chr13 71622999 71623230 -48661082 + (TG)n Simple_repeat Simple_repeat 1 229 0 1 1131 4156 50 0 6 chr13 71623410 71623917 -48660395 + L1Md_F2 LINE L1 6079 6582 0 1 1131 219 146 0 0 chr13 71623921 71623962 -48660350 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1131 894 96 80 15 chr13 71624681 71624818 -48659494 - L1_Mus1 LINE L1 -370 6197 6052 1 1131 416 186 11 65 chr13 71624818 71624910 -48659402 + MT2B LTR ERVL 206 292 -309 1 1131 820 213 0 52 chr13 71624885 71625153 -48659159 + ORR1A3-int LTR MaLR 739 992 -971 1 1131 646 132 47 148 chr13 71625089 71625258 -48659054 + RLTR25B LTR ERVK 620 771 -257 1 1131 520 236 34 48 chr13 71625240 71625387 -48658925 + RLTR25B LTR ERVK 884 1028 0 1 1131 1014 246 103 27 chr13 71626557 71626887 -48657425 - ORR1D2 LTR MaLR 0 370 16 1 1131 1200 81 0 0 chr13 71628459 71628607 -48655705 - B1_Mus1 SINE Alu 0 148 1 1 1131 836 295 19 73 chr13 71628614 71629090 -48655222 - Lx9 LINE L1 -106 7538 7089 1 1131 36073 35 0 0 chr13 71629092 71634564 -48649748 + L1Md_T LINE L1 23 5589 -297 1 1131 9108 8 0 0 chr13 71634564 71635560 -48648752 + L1Md_T LINE L1 5590 6585 0 1 1131 261 0 0 0 chr13 71635563 71635592 -48648720 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1131 422 293 23 52 chr13 71635599 71635772 -48648540 - Lx9 LINE L1 -544 7100 6933 1 1131 267 225 0 0 chr13 71635908 71635979 -48648333 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1131 674 44 11 0 chr13 71636352 71636442 -48647870 + (TC)n Simple_repeat Simple_repeat 2 92 0 1 1131 370 246 98 8 chr13 71638489 71638612 -48645700 - Lx7 LINE L1 -1647 6049 5916 1 1131 444 261 34 38 chr13 71638595 71638765 -48645547 + Lx7 LINE L1 7538 7679 -17 1 1131 30 45 0 0 chr13 71638862 71638906 -48645406 + AT_rich Low_complexity Low_complexity 1 44 0 1 1131 382 261 138 27 chr13 71639177 71639401 -48644911 + B4A SINE B4 1 249 -43 1 1131 211 130 37 0 chr13 71639523 71639577 -48644735 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1131 271 207 0 0 chr13 71639694 71639752 -48644560 - B3 SINE B2 -6 210 153 1 1131 414 0 0 0 chr13 71639814 71639860 -48644452 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 1 1131 5272 118 74 2 chr13 71640354 71641196 -48643116 + RLTR13D6 LTR ERVK 1 902 0 1 1131 369 176 0 0 chr13 71641530 71641638 -48642674 + T-rich Low_complexity Low_complexity 1 108 0 1 1131 207 0 0 0 chr13 71641635 71641658 -48642654 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 1 1131 343 287 93 0 chr13 71641663 71641771 -48642541 - B1F SINE Alu -1 148 31 1 1131 545 273 35 0 chr13 71642576 71642719 -48641593 - MTE2b LTR MaLR -231 148 1 1 1131 341 22 22 0 chr13 71643277 71643323 -48640989 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 1 1131 212 179 0 25 chr13 71643995 71644035 -48640277 + GA-rich Low_complexity Low_complexity 2 40 0 1 1131 961 311 38 35 chr13 71646561 71647041 -48637271 + RMER5 LTR ERV1 43 523 -11 1 1131 822 274 34 157 chr13 71647295 71647710 -48636602 + MTE2a LTR MaLR 1 364 -15 1 1131 271 215 31 0 chr13 71647984 71648049 -48636263 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 1131 25 31 0 0 chr13 71648094 71648126 -48636186 + AT_rich Low_complexity Low_complexity 1 32 0 1 1131 29 47 0 0 chr13 71651576 71651619 -48632693 + AT_rich Low_complexity Low_complexity 1 43 0 1 1131 414 134 0 0 chr13 71651629 71651696 -48632616 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 1131 249 169 0 63 chr13 71651721 71651816 -48632496 + (TATG)n Simple_repeat Simple_repeat 2 90 0 1 1131 1686 148 12 70 chr13 71653708 71654049 -48630263 + ORR1A4 LTR MaLR 1 321 -8 1 1131 1326 263 24 15 chr13 71654060 71654392 -48629920 + MTEa LTR MaLR 13 347 -32 1 1131 616 108 0 0 chr13 71654976 71655069 -48629243 + MT2B2 LTR ERVL 1 93 -491 1 1131 422 216 21 0 chr13 71655010 71655107 -48629205 + ORR1A4-int LTR MaLR 646 744 -1219 1 1131 1119 107 128 6 chr13 71655107 71655286 -48629026 - MERVL-int LTR ERVL -381 5104 4904 1 1131 471 149 25 0 chr13 71656504 71656625 -48627687 + (TAGA)n Simple_repeat Simple_repeat 3 126 0 1 1131 768 130 35 6 chr13 71656717 71656887 -48627425 + (TAGA)n Simple_repeat Simple_repeat 4 178 0 1 1131 351 268 113 44 chr13 71657259 71657462 -48626850 - RLTR42-int LTR ERVK -4122 1400 1184 1 1131 346 316 21 0 chr13 71657699 71657794 -48626518 + B1F SINE Alu 1 97 -52 1 1131 277 327 6 62 chr13 71657806 71657966 -48626346 + L1MA4A LINE L1 5421 5571 -597 1 1131 695 302 60 15 chr13 71658000 71658317 -48625995 + L1MA4A LINE L1 5637 5961 -195 1 1131 21 36 0 0 chr13 71658420 71658448 -48625864 + AT_rich Low_complexity Low_complexity 1 28 0 1 1131 420 37 0 0 chr13 71661109 71661163 -48623149 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1131 6060 64 13 5 chr13 71661303 71662070 -48622242 - L1Md_F2 LINE L1 -12 6570 5798 1 1131 21734 71 5 1 chr13 71662070 71664908 -48619404 + L1_Mm LINE L1 2593 5458 -736 1 1131 741 283 79 13 chr13 71665164 71665468 -48618844 + L1MC3 LINE L1 7219 7542 -243 1 1131 489 47 0 0 chr13 71665712 71665776 -48618536 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 1131 639 0 0 0 chr13 71665777 71665848 -48618464 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 1131 376 91 15 15 chr13 71666206 71666273 -48618039 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 1131 225 0 0 0 chr13 71668032 71668057 -48616255 + (CCA)n Simple_repeat Simple_repeat 2 26 0 1 1131 739 249 87 0 chr13 71669368 71669553 -48614759 - B3 SINE B2 -5 211 11 1 1131 241 280 13 13 chr13 71669554 71669572 -48614740 + polypyrimidine Low_complexity Low_complexity 60 77 0 1 1131 1179 117 0 0 chr13 71669572 71669752 -48614560 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 1 1131 241 280 13 13 chr13 71669752 71669809 -48614503 + polypyrimidine Low_complexity Low_complexity 2 59 0 1 1131 201 108 0 0 chr13 71670970 71671007 -48613305 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 1 1131 890 233 33 19 chr13 71671320 71671530 -48612782 - B3 SINE B2 -3 213 1 1 1131 619 215 6 6 chr13 71672315 71672493 -48611819 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 1131 2350 15 0 0 chr13 71673270 71673529 -48610783 - L1Md_T LINE L1 -205 6377 6119 1 1131 1693 61 0 0 chr13 71673530 71673799 -48610513 + L1Md_T LINE L1 6367 6582 0 1 1131 402 289 0 17 chr13 71675221 71675337 -48608975 + B4A SINE B4 5 118 -174 1 1131 387 0 0 0 chr13 71675453 71675496 -48608816 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1131 609 61 0 0 chr13 71676600 71676682 -48607630 + (GGAA)n Simple_repeat Simple_repeat 3 84 0 1 1131 315 0 0 0 chr13 71677949 71677984 -48606328 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1131 393 240 296 46 chr13 71678482 71678766 -48605546 + MTEb LTR MaLR 1 355 -24 1 1131 21 0 0 0 chr13 71679416 71679437 -48604875 + AT_rich Low_complexity Low_complexity 1 21 0 1 1131 1110 217 109 23 chr13 71679510 71679859 -48604453 - Lx9 LINE L1 -1530 6114 5736 1 1131 8062 65 0 4 chr13 71679851 71681491 -48602821 - L1Md_F2 LINE L1 -2 6580 4946 1 1131 1365 265 13 24 chr13 71681488 71681863 -48602449 - Lx9 LINE L1 -136 5711 5341 1 1131 3785 221 50 17 chr13 71681848 71682749 -48601563 + Lx9 LINE L1 6528 7458 -186 1 1131 471 18 0 0 chr13 71682756 71682812 -48601500 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 1 1131 2139 150 0 57 chr13 71683278 71683667 -48600645 + ORR1B2 LTR MaLR 1 367 0 1 1131 351 0 0 0 chr13 71683737 71683776 -48600536 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1131 243 0 0 0 chr13 71683972 71683999 -48600313 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1131 562 96 0 21 chr13 71684007 71684103 -48600209 - L1Md_F2 LINE L1 -25 6557 6464 2 1131 221 75 0 24 chr13 71684341 71684382 -48599930 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1131 2089 192 12 94 chr13 71684494 71685070 -48599242 - RLTR20B3 LTR ERVK -43 534 6 2 1131 507 283 22 36 chr13 71685163 71685412 -48598900 + CT-rich Low_complexity Low_complexity 1 245 0 2 1131 183 162 0 0 chr13 71688310 71688347 -48595965 + (ATGGTG)n Simple_repeat Simple_repeat 1 37 0 2 1131 21 0 0 0 chr13 71690644 71690665 -48593647 + AT_rich Low_complexity Low_complexity 1 21 0 2 1131 347 0 0 23 chr13 71691184 71691228 -48593084 + (CAA)n Simple_repeat Simple_repeat 3 45 0 2 1131 269 295 0 0 chr13 71691645 71691706 -48592606 + Lx8 LINE L1 7263 7323 -150 2 1131 254 184 13 0 chr13 71691706 71691782 -48592530 + GA-rich Low_complexity Low_complexity 2 78 0 2 1131 588 153 22 11 chr13 71691796 71691974 -48592338 + (CAGA)n Simple_repeat Simple_repeat 1 180 0 2 1131 180 97 0 0 chr13 71691994 71692025 -48592287 + (CGAG)n Simple_repeat Simple_repeat 2 32 0 2 1131 2393 88 22 0 chr13 71692119 71692439 -48591873 + ORR1A2 LTR MaLR 1 327 0 2 1131 450 279 241 54 chr13 71693900 71694197 -48590115 - MTE2a LTR MaLR -21 358 7 2 1131 274 292 57 31 chr13 71694715 71694874 -48589438 - L1MB2 LINE L1 -242 5929 5767 2 1131 689 33 22 0 chr13 71695328 71695419 -48588893 + (TCTA)n Simple_repeat Simple_repeat 4 96 0 2 1131 495 217 0 0 chr13 71695427 71695579 -48588733 + (TA)n Simple_repeat Simple_repeat 2 153 0 2 1132 2180 225 81 19 chr13 71696912 71697436 -48586876 - Lx9 LINE L1 0 7644 7076 2 1132 378 0 0 0 chr13 71697436 71697478 -48586834 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2 1132 2180 225 81 19 chr13 71697478 71697537 -48586775 - Lx9 LINE L1 -569 7075 7026 2 1132 466 246 150 0 chr13 71697541 71697708 -48586604 + Lx9 LINE L1 6791 6982 -662 2 1132 210 37 0 0 chr13 71697709 71697736 -48586576 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 2 1132 2998 54 0 3 chr13 71697736 71698105 -48586207 + L1_Mus1 LINE L1 6200 6567 0 2 1132 1655 76 0 30 chr13 71698137 71698369 -48585943 + L1_Mus1 LINE L1 6342 6566 -1 2 1132 702 48 0 0 chr13 71698717 71698800 -48585512 - L1_Mus4 LINE L1 -480 6156 6074 2 1132 713 100 8 8 chr13 71698801 71698922 -48585390 + Lx LINE L1 6534 6654 0 2 1132 270 254 0 14 chr13 71699775 71699847 -48584465 - RLTR31_Mm LTR ERVK 0 561 491 2 1132 3080 136 10 4 chr13 71699846 71700342 -48583970 - RLTR17 LTR ERVK -96 596 98 2 1132 219 257 27 0 chr13 71700607 71700681 -48583631 - B2_Mm2 SINE B2 -118 77 2 2 1132 230 276 13 13 chr13 71701343 71701420 -48582892 + MER57D LTR ERV1 118 194 -240 2 1132 239 227 51 40 chr13 71701424 71701524 -48582788 + MER57D LTR ERV1 299 396 -38 2 1132 1019 305 60 11 chr13 71702012 71702360 -48581952 + MTEa LTR MaLR 1 365 -14 2 1132 201 108 0 0 chr13 71703974 71704011 -48580301 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1132 200 35 35 0 chr13 71704423 71704452 -48579860 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1132 817 137 12 0 chr13 71704872 71705040 -48579272 + (TCTA)n Simple_repeat Simple_repeat 3 172 0 2 1132 217 158 53 0 chr13 71705048 71705105 -48579207 + (CATATA)n Simple_repeat Simple_repeat 4 63 0 2 1132 204 245 20 0 chr13 71705864 71705913 -48578399 + (CATA)n Simple_repeat Simple_repeat 2 51 0 2 1132 531 133 38 12 chr13 71705913 71706073 -48578239 + (TAGA)n Simple_repeat Simple_repeat 3 166 0 2 1132 516 200 27 11 chr13 71706073 71706344 -48577968 + (CATA)n Simple_repeat Simple_repeat 1 275 0 2 1132 265 316 124 37 chr13 71706370 71706531 -48577781 - MLT2C2 LTR ERVL -253 211 37 2 1132 212 196 0 18 chr13 71707153 71707210 -48577102 + (TA)n Simple_repeat Simple_repeat 1 56 0 2 1132 433 318 86 53 chr13 71708417 71708849 -48575463 - L1M5 LINE L1 -1599 4547 4102 2 1132 240 330 164 57 chr13 71709525 71709824 -48574488 + L1M2a LINE L1 775 1105 -6063 2 1132 323 208 61 25 chr13 71711268 71711431 -48572881 + (CTGTG)n Simple_repeat Simple_repeat 1 169 0 2 1132 216 0 0 0 chr13 71711710 71711734 -48572578 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1132 496 256 96 69 chr13 71711749 71711967 -48572345 - B4A SINE B4 -14 278 55 2 1132 272 329 85 24 chr13 71714435 71714600 -48569712 - L1MC3 LINE L1 -293 7492 7318 2 1132 7771 70 3 2 chr13 71714619 71715833 -48568479 - L1_Mus2 LINE L1 0 6566 5351 2 1132 420 333 85 21 chr13 71716549 71716828 -48567484 - MLT2B3 LTR ERVL -46 624 336 2 1132 883 316 84 9 chr13 71717164 71717650 -48566662 - L1MA4 LINE L1 -204 6096 5564 2 1132 1121 257 102 61 chr13 71717668 71718108 -48566204 + RMER13A LTR ERVK 4 461 -399 2 1132 508 289 75 83 chr13 71719416 71719778 -48564534 - ORR1E LTR MaLR 0 359 1 2 1132 305 221 54 23 chr13 71721716 71721846 -48562466 + (TAGA)n Simple_repeat Simple_repeat 4 137 0 2 1132 922 71 32 6 chr13 71721859 71722016 -48562296 + (TAGA)n Simple_repeat Simple_repeat 3 163 0 2 1132 7754 85 6 1 chr13 71722153 71723744 -48560568 - L1_Mus1 LINE L1 0 6567 4969 2 1132 502 261 34 34 chr13 71725757 71725904 -48558408 - B1F1 SINE Alu -2 147 1 2 1132 323 97 302 50 chr13 71726217 71726336 -48557976 - B2_Mm2 SINE B2 0 195 47 2 1132 1287 91 23 0 chr13 71726393 71726568 -48557744 - B2_Mm2 SINE B2 -13 182 4 2 1132 608 328 6 0 chr13 71726605 71726776 -48557536 + B3A SINE B2 1 172 -26 2 1132 30 0 0 0 chr13 71726811 71726841 -48557471 + AT_rich Low_complexity Low_complexity 1 30 0 2 1132 381 305 13 60 chr13 71727226 71727376 -48556936 + RMER15 LTR ERVL 346 488 -87 2 1132 369 0 0 0 chr13 71730596 71730637 -48553675 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1132 399 254 62 14 chr13 71730921 71731065 -48553247 - L1MC LINE L1 -1421 4725 4575 2 1132 283 181 35 29 chr13 71731380 71731456 -48552856 + B1F SINE Alu 1 78 -49 2 1132 324 184 0 0 chr13 71731490 71731588 -48552724 + GA-rich Low_complexity Low_complexity 1 98 0 2 1132 1038 69 8 34 chr13 71732717 71732957 -48551355 + (CA)n Simple_repeat Simple_repeat 1 233 0 2 1132 1362 210 15 128 chr13 71734249 71734656 -48549656 + ORR1B1 LTR MaLR 1 394 0 2 1132 741 53 0 0 chr13 71735073 71735167 -48549145 + (TA)n Simple_repeat Simple_repeat 2 95 0 2 1132 545 215 6 28 chr13 71736231 71736413 -48547899 + GA-rich Low_complexity Low_complexity 3 180 0 2 1132 618 195 0 30 chr13 71736429 71736598 -48547714 + G-rich Low_complexity Low_complexity 4 167 0 2 1132 492 32 0 0 chr13 71737209 71737271 -48547041 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 1132 330 26 0 0 chr13 71737652 71737691 -48546621 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1132 303 317 107 17 chr13 71740504 71740738 -48543574 - MER33 DNA MER1_type -47 277 23 2 1132 307 333 83 36 chr13 71741149 71741342 -48542970 + B4A SINE B4 3 204 -88 2 1132 387 0 0 0 chr13 71741393 71741436 -48542876 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1132 27 29 0 0 chr13 71741866 71741900 -48542412 + AT_rich Low_complexity Low_complexity 1 34 0 2 1132 225 333 19 19 chr13 71743417 71743524 -48540788 - Lx8 LINE L1 0 7473 7367 2 1132 465 271 7 14 chr13 71744655 71744801 -48539511 - MMAR1 DNA Mariner -159 1127 983 2 1132 943 125 0 12 chr13 71744818 71744988 -48539324 + (TTC)n Simple_repeat Simple_repeat 2 169 0 2 1132 287 325 56 8 chr13 71745047 71745171 -48539141 - B3A SINE B2 -66 150 12 2 1132 1574 289 85 13 chr13 71745182 71745736 -48538576 - MMAR1 DNA Mariner -321 965 372 2 1132 664 232 115 112 chr13 71745984 71746270 -48538042 - MMAR1 DNA Mariner -875 411 125 2 1132 365 297 26 51 chr13 71746631 71746787 -48537525 + L3b LINE CR1 177 328 -154 2 1132 26 0 0 0 chr13 71746851 71746877 -48537435 + AT_rich Low_complexity Low_complexity 1 26 0 2 1132 426 271 130 15 chr13 71747480 71747611 -48536701 - RSINE1 SINE B4 -15 150 5 2 1132 1244 298 104 38 chr13 71747830 71748047 -48536265 - Lx5 LINE L1 0 7050 6830 2 1132 366 23 0 0 chr13 71748047 71748090 -48536222 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 2 1132 1244 298 104 38 chr13 71748090 71748136 -48536176 - Lx5 LINE L1 -221 6829 6790 2 1132 351 0 0 0 chr13 71748136 71748175 -48536137 + (CA)n Simple_repeat Simple_repeat 1 39 0 2 1132 1244 298 104 38 chr13 71748175 71748440 -48535872 - Lx5 LINE L1 -261 6789 6487 2 1132 1699 199 28 16 chr13 71748438 71748986 -48535326 - Lx5 LINE L1 -702 6348 5651 2 1132 410 347 80 48 chr13 71751374 71751625 -48532687 - ORR1E LTR MaLR 0 359 101 2 1132 1878 188 38 0 chr13 71751791 71752164 -48532148 - Lx LINE L1 0 6654 6268 2 1132 406 303 80 15 chr13 71752252 71752453 -48531859 - MLT1B LTR MaLR -2 388 175 2 1132 366 91 0 35 chr13 71752523 71752580 -48531732 + RLTR23 LTR ERV1 3 57 -373 2 1132 369 145 0 0 chr13 71752620 71752682 -48531630 + (CTG)n Simple_repeat Simple_repeat 2 63 0 2 1132 323 268 10 0 chr13 71752682 71752779 -48531533 + (CAA)n Simple_repeat Simple_repeat 3 100 0 2 1132 1085 195 43 17 chr13 71752780 71753015 -48531297 + RLTR23 LTR ERV1 190 430 0 2 1132 25 0 0 0 chr13 71754531 71754556 -48529756 + AT_rich Low_complexity Low_complexity 1 25 0 2 1132 3067 74 65 7 chr13 71755070 71755503 -48528809 - L1_Mus4 LINE L1 -277 6359 5902 2 1132 1395 116 0 0 chr13 71755513 71755720 -48528592 + L1_Mus4 LINE L1 6424 6630 -6 2 1132 1238 165 89 8 chr13 71755869 71756126 -48528186 + ORR1C2 LTR MaLR 107 384 0 2 1132 1109 284 136 19 chr13 71756382 71756920 -48527392 + RCHARR1 DNA MER1_type 67 667 -307 2 1132 39 50 0 0 chr13 71756920 71756980 -48527332 + AT_rich Low_complexity Low_complexity 1 60 0 2 1132 230 191 0 41 chr13 71757001 71757050 -48527262 + G-rich Low_complexity Low_complexity 6 52 0 2 1132 300 233 171 65 chr13 71757161 71757331 -48526981 - L3b LINE CR1 -118 364 177 2 1132 294 293 7 26 chr13 71757935 71758086 -48526226 + (TG)n Simple_repeat Simple_repeat 2 149 0 2 1132 369 0 0 0 chr13 71758091 71758132 -48526180 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1132 255 31 0 0 chr13 71758132 71758163 -48526149 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1132 2797 202 49 20 chr13 71758594 71759201 -48525111 - Lx2B LINE L1 -3 6997 6373 2 1132 225 132 0 0 chr13 71760108 71760146 -48524166 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1132 367 328 50 0 chr13 71760192 71760311 -48524001 - RSINE1 SINE B4 -29 136 12 2 1132 938 76 0 8 chr13 71761369 71761502 -48522810 + (TTC)n Simple_repeat Simple_repeat 2 133 0 3 1132 3360 51 7 10 chr13 71763399 71763817 -48520495 - L1_Mus1 LINE L1 -416 6151 5735 3 1132 1897 48 9 0 chr13 71763817 71764048 -48520264 + L1_Mus1 LINE L1 6335 6567 0 3 1132 330 82 0 58 chr13 71766936 71766988 -48517324 + HAL1-3A_ME LINE L1 1964 2012 -846 3 1132 193 174 0 28 chr13 71767002 71767073 -48517239 + (CA)n Simple_repeat Simple_repeat 1 69 0 3 1132 657 261 28 46 chr13 71768217 71768434 -48515878 - B3 SINE B2 -3 213 1 3 1132 318 176 0 0 chr13 71768645 71768730 -48515582 + (TG)n Simple_repeat Simple_repeat 1 85 0 3 1132 501 32 0 0 chr13 71768734 71768797 -48515515 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 1132 351 0 0 0 chr13 71768797 71768835 -48515477 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1132 348 309 56 20 chr13 71769478 71769729 -48514583 + L1M3b LINE L1 1176 1435 -4878 3 1132 959 163 202 6 chr13 71769761 71769934 -48514378 - B3 SINE B2 -6 210 4 3 1132 267 319 46 30 chr13 71770204 71770466 -48513846 + L1M3b LINE L1 1418 1683 -4701 3 1132 192 35 49 66 chr13 71770466 71770527 -48513785 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 3 1132 1165 148 148 0 chr13 71770655 71770851 -48513461 + URR1B DNA MER1_type 1 225 0 3 1132 663 312 19 12 chr13 71771394 71771650 -48512662 + L1M3b LINE L1 4086 4343 -2036 3 1132 3782 189 22 9 chr13 71771782 71772651 -48511661 - Lx2B LINE L1 0 7008 6081 3 1132 1427 175 77 0 chr13 71772656 71772941 -48511371 + IAPEY3_LTR LTR ERVK 14 320 -12 3 1132 3808 142 9 7 chr13 71772946 71773777 -48510535 - Lx2B LINE L1 -907 6093 5263 3 1132 7030 180 37 19 chr13 71773776 71775474 -48508838 + Lx5 LINE L1 5313 7049 -1 3 1132 210 254 0 0 chr13 71775656 71775723 -48508589 + GA-rich Low_complexity Low_complexity 2 68 0 3 1132 764 292 61 26 chr13 71775842 71776302 -48508010 + L1M3b LINE L1 5037 5512 -867 3 1132 425 304 77 5 chr13 71776330 71776525 -48507787 + Lx9 LINE L1 6480 6688 -956 3 1132 1394 191 16 98 chr13 71776601 71776967 -48507345 + RMER17A2 LTR ERVK 1 336 -570 3 1132 1741 75 29 29 chr13 71776978 71777253 -48507059 + MTB LTR MaLR 126 400 0 3 1132 371 275 51 0 chr13 71777296 71777434 -48506878 + L1MA7 LINE L1 6067 6211 -80 3 1132 263 259 0 0 chr13 71777646 71777700 -48506612 + B3 SINE B2 1 54 -162 3 1132 1209 124 17 0 chr13 71777980 71778157 -48506155 + B2_Mm2 SINE B2 2 181 -14 3 1132 275 322 165 0 chr13 71779680 71779801 -48504511 - RSINE1 SINE B4 -21 144 4 3 1132 457 111 28 0 chr13 71783328 71783400 -48500912 + Lx9 LINE L1 7371 7444 -200 3 1132 491 242 7 22 chr13 71783413 71783548 -48500764 + Lx9 LINE L1 7511 7643 -1 3 1132 446 203 0 8 chr13 71784038 71784162 -48500150 + (CA)n Simple_repeat Simple_repeat 2 124 0 3 1132 318 50 0 0 chr13 71785739 71785779 -48498533 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 1132 276 77 0 0 chr13 71785802 71785841 -48498471 + (GA)n Simple_repeat Simple_repeat 2 40 0 3 1132 496 288 81 53 chr13 71785841 71786050 -48498262 - B4A SINE B4 -77 215 1 3 1132 298 345 11 0 chr13 71788351 71788438 -48495874 - Lx8 LINE L1 -147 7326 7239 3 1132 432 0 0 0 chr13 71790740 71790788 -48493524 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1132 201 39 0 0 chr13 71792664 71792690 -48491622 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1132 215 280 108 20 chr13 71793421 71793523 -48490789 + PB1D10 SINE Alu 1 111 -6 3 1132 1211 263 43 9 chr13 71795402 71795728 -48488584 - ORR1D2 LTR MaLR -1 369 33 3 1132 636 237 7 14 chr13 71795729 71795870 -48488442 - Lx6 LINE L1 -409 7051 6912 3 1132 558 0 0 0 chr13 71795870 71795932 -48488380 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1132 200 182 0 0 chr13 71800061 71800094 -48484218 + (CTTG)n Simple_repeat Simple_repeat 3 35 0 3 1132 1147 233 174 0 chr13 71800655 71801011 -48483301 - MTD LTR MaLR -1 418 1 3 1132 634 222 14 7 chr13 71801369 71801514 -48482798 + B1_Mus1 SINE Alu 2 147 -1 3 1132 705 302 6 0 chr13 71801544 71801723 -48482589 + B3A SINE B2 1 180 -18 3 1132 189 0 0 0 chr13 71801742 71801763 -48482549 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 1132 561 30 0 0 chr13 71802077 71802144 -48482168 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 1132 222 347 0 0 chr13 71803683 71803778 -48480534 + GA-rich Low_complexity Low_complexity 4 98 0 3 1132 198 0 0 0 chr13 71804266 71804288 -48480024 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1132 368 255 29 29 chr13 71804307 71804412 -48479900 - PB1D10 SINE Alu -11 106 2 3 1132 1591 184 68 0 chr13 71805047 71805356 -48478956 + Lx9 LINE L1 7120 7449 -195 3 1132 606 51 0 0 chr13 71805356 71805434 -48478878 + (TAGA)n Simple_repeat Simple_repeat 3 80 0 3 1132 228 135 0 0 chr13 71805440 71805477 -48478835 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 3 1132 354 198 22 11 chr13 71805478 71805570 -48478742 + Lx9 LINE L1 7548 7640 -4 3 1132 333 0 0 0 chr13 71806123 71806160 -48478152 + (A)n Simple_repeat Simple_repeat 1 37 0 3 1132 288 170 0 0 chr13 71807317 71807370 -48476942 + A-rich Low_complexity Low_complexity 1 53 0 3 1132 378 0 0 0 chr13 71807796 71807838 -48476474 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1132 580 297 42 26 chr13 71808748 71808938 -48475374 + B3A SINE B2 1 193 -5 3 1132 2342 334 43 14 chr13 71808960 71810046 -48474266 + Lx8 LINE L1 6109 7226 -247 3 1132 312 172 0 0 chr13 71810046 71810104 -48474208 + G-rich Low_complexity Low_complexity 4 61 0 3 1132 1976 191 15 10 chr13 71810494 71810895 -48473417 + MTC LTR MaLR 6 408 -13 3 1132 214 100 75 0 chr13 71812703 71812743 -48471569 + T-rich Low_complexity Low_complexity 2 44 0 3 1132 258 222 0 45 chr13 71815168 71815234 -48469078 + GA-rich Low_complexity Low_complexity 4 66 0 3 1132 603 134 7 54 chr13 71815761 71816204 -48468108 + (TATG)n Simple_repeat Simple_repeat 1 422 0 3 1132 264 108 27 73 chr13 71816222 71816372 -48467940 + (TATG)n Simple_repeat Simple_repeat 4 146 0 3 1132 323 207 66 8 chr13 71816844 71816966 -48467346 + (TCTA)n Simple_repeat Simple_repeat 1 129 0 3 1132 281 299 0 31 chr13 71817366 71817528 -48466784 + (CATATA)n Simple_repeat Simple_repeat 2 158 0 3 1132 338 253 188 40 chr13 71817751 71817953 -48466359 - MLT2C2 LTR ERVL -232 232 1 3 1132 4534 51 0 4 chr13 71818131 71818683 -48465629 + L1Md_F2 LINE L1 6021 6570 -12 3 1132 2811 101 28 2 chr13 71821934 71822331 -48461981 - MTB_Mm LTR MaLR 0 407 1 3 1132 26 0 0 0 chr13 71823682 71823708 -48460604 + AT_rich Low_complexity Low_complexity 1 26 0 3 1132 235 90 36 71 chr13 71825136 71825220 -48459092 + T-rich Low_complexity Low_complexity 3 83 0 3 1132 235 182 33 43 chr13 71825236 71825328 -48458984 + T-rich Low_complexity Low_complexity 2 92 0 3 1132 194 62 0 30 chr13 71825334 71825367 -48458945 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 3 1132 1048 115 0 7 chr13 71825381 71825530 -48458782 - B1_Mus1 SINE Alu 0 148 1 3 1132 222 80 39 20 chr13 71825560 71825611 -48458701 + (TTTTA)n Simple_repeat Simple_repeat 2 53 0 3 1132 217 181 11 98 chr13 71825645 71825737 -48458575 + T-rich Low_complexity Low_complexity 6 89 0 3 1133 255 157 0 0 chr13 71829912 71829963 -48454349 + (TTG)n Simple_repeat Simple_repeat 2 52 0 3 1133 325 0 22 22 chr13 71830559 71830605 -48453707 + (GA)n Simple_repeat Simple_repeat 1 46 0 3 1133 2068 226 71 8 chr13 71830612 71831117 -48453195 + Lx9 LINE L1 6959 7495 -149 3 1133 427 156 10 20 chr13 71831248 71831346 -48452966 + L1M2 LINE L1 5125 5221 -922 3 1133 465 92 0 0 chr13 71831347 71831423 -48452889 + (GAAAA)n Simple_repeat Simple_repeat 2 77 0 3 1133 231 88 0 0 chr13 71833424 71833458 -48450854 + (TATG)n Simple_repeat Simple_repeat 1 34 0 3 1133 2103 128 0 58 chr13 71834367 71834714 -48449598 + ORR1A2 LTR MaLR 1 327 0 3 1133 676 280 30 82 chr13 71834723 71835054 -48449258 - ORR1E LTR MaLR -36 323 10 3 1133 312 0 0 0 chr13 71835087 71835125 -48449187 - tRNA-Ile-ATA tRNA tRNA -39 38 1 3 1133 402 85 0 0 chr13 71836761 71836820 -48447492 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1133 447 294 11 43 chr13 71836832 71837017 -48447295 + (CATA)n Simple_repeat Simple_repeat 2 180 0 3 1133 214 333 0 0 chr13 71840418 71840475 -48443837 + B1F2 SINE Alu 4 60 -89 3 1133 314 256 12 35 chr13 71840482 71840567 -48443745 + B4A SINE B4 187 269 -23 3 1133 279 0 0 0 chr13 71841001 71841032 -48443280 + (CTA)n Simple_repeat Simple_repeat 3 33 0 3 1133 711 35 0 0 chr13 71841032 71841118 -48443194 + (GA)n Simple_repeat Simple_repeat 2 87 0 3 1133 603 0 0 0 chr13 71841118 71841185 -48443127 + (GGA)n Simple_repeat Simple_repeat 2 68 0 3 1133 233 352 21 7 chr13 71842378 71842518 -48441794 - MER121 Unknown Unknown -193 219 78 3 1133 539 302 0 7 chr13 71844439 71844579 -48439733 + B3A SINE B2 28 166 -32 3 1133 879 10 0 0 chr13 71844581 71844681 -48439631 + (CA)n Simple_repeat Simple_repeat 1 100 0 3 1133 261 0 0 0 chr13 71845744 71845773 -48438539 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1133 225 196 0 0 chr13 71845991 71846042 -48438270 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 3 1133 29 0 0 0 chr13 71846510 71846539 -48437773 + AT_rich Low_complexity Low_complexity 1 29 0 3 1133 248 294 29 0 chr13 71846592 71846660 -48437652 + L1M4 LINE L1 5565 5634 -550 3 1133 365 314 135 18 chr13 71846839 71847121 -48437191 + L1MD1 LINE L1 5907 6221 -21 3 1133 711 263 36 26 chr13 71847204 71847399 -48436913 + B3A SINE B2 2 198 0 3 1133 433 319 172 13 chr13 71849601 71849833 -48434479 - B4A SINE B4 -22 270 2 3 1133 297 333 78 46 chr13 71851720 71851937 -48432375 - Tigger5 DNA MER2_type -2169 237 14 3 1133 369 232 22 34 chr13 71852120 71852209 -48432103 + PB1D10 SINE Alu 23 110 -7 3 1133 405 277 0 38 chr13 71852494 71852599 -48431713 + RSINE1 SINE B4 4 104 -61 3 1133 2312 57 14 0 chr13 71853978 71854275 -48430037 - L1Md_F2 LINE L1 0 6582 6282 3 1133 517 198 67 3 chr13 71854789 71854913 -48429399 - B2_Mm2 SINE B2 -30 186 52 3 1133 369 43 0 0 chr13 71854915 71854962 -48429350 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1133 305 304 169 16 chr13 71855846 71856030 -48428282 - MLT1A LTR MaLR -159 215 4 4 1133 2136 113 116 3 chr13 71856252 71856606 -48427706 + ORR1B1 LTR MaLR 1 394 0 4 1133 1052 292 69 53 chr13 71856637 71856686 -48427626 + RCHARR1 DNA MER1_type 47 90 -884 4 1133 1823 129 112 3 chr13 71856686 71856981 -48427331 - ORR1A2 LTR MaLR 0 327 1 4 1133 1052 292 69 53 chr13 71856981 71857307 -48427005 + RCHARR1 DNA MER1_type 91 428 -546 4 1133 255 246 0 0 chr13 71857370 71857439 -48426873 - Lx9 LINE L1 0 7644 7576 4 1133 24 32 0 0 chr13 71857525 71857556 -48426756 + AT_rich Low_complexity Low_complexity 1 31 0 4 1133 1369 87 9 5 chr13 71857596 71857798 -48426514 + L1_Mus2 LINE L1 5870 6073 -493 4 1133 1473 214 76 39 chr13 71857798 71858313 -48425999 + RCHARR1 DNA MER1_type 441 974 0 4 1133 288 382 71 31 chr13 71860642 71860866 -48423446 + MLT1H LTR MaLR 96 328 -221 4 1133 595 306 75 11 chr13 71861016 71861204 -48423108 + ID_B1 SINE B4 8 207 -17 4 1133 332 254 201 13 chr13 71861708 71861970 -48422342 + L1MC LINE L1 5378 5679 -665 4 1133 548 215 44 19 chr13 71862035 71862208 -48422104 + Lx9 LINE L1 5791 5970 -1674 4 1133 406 61 30 0 chr13 71862389 71862455 -48421857 + (TA)n Simple_repeat Simple_repeat 2 69 0 4 1133 2027 289 121 65 chr13 71862460 71863433 -48420879 + Lx9 LINE L1 6361 7388 -256 4 1133 285 215 0 0 chr13 71863498 71863591 -48420721 + (TG)n Simple_repeat Simple_repeat 2 94 0 4 1133 569 287 179 20 chr13 71863982 71864234 -48420078 - B4 SINE B4 0 292 1 4 1133 246 105 0 0 chr13 71865275 71865313 -48418999 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1133 813 179 164 26 chr13 71866013 71866048 -48418264 - B3 SINE B2 -1 215 183 4 1133 351 0 0 0 chr13 71866048 71866087 -48418225 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1133 813 179 164 26 chr13 71866087 71866240 -48418072 - B3 SINE B2 -34 182 1 4 1133 213 39 0 0 chr13 71866904 71866930 -48417382 + (TTGG)n Simple_repeat Simple_repeat 1 26 0 4 1133 261 0 0 0 chr13 71866935 71866964 -48417348 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1133 1047 80 0 0 chr13 71866964 71867114 -48417198 + (GA)n Simple_repeat Simple_repeat 1 151 0 4 1133 477 0 0 0 chr13 71868710 71868763 -48415549 + (TC)n Simple_repeat Simple_repeat 2 54 0 4 1133 270 248 0 114 chr13 71869128 71869151 -48415161 - B4A SINE B4 0 292 271 4 1133 342 0 0 0 chr13 71869151 71869189 -48415123 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1133 270 257 46 118 chr13 71869189 71869328 -48414984 - B4A SINE B4 -22 270 115 4 1133 4300 117 5 0 chr13 71869328 71869926 -48414386 - MT2B LTR ERVL 0 601 1 4 1133 255 280 161 129 chr13 71869926 71870059 -48414253 - B4 SINE B4 -178 114 2 4 1133 2128 82 6 12 chr13 71870251 71870572 -48413740 - ORR1A2 LTR MaLR -8 319 1 4 1133 227 369 0 18 chr13 71872474 71872587 -48411725 + (CA)n Simple_repeat Simple_repeat 1 111 0 4 1133 286 185 15 30 chr13 71873078 71873145 -48411167 - ID4 SINE ID -2 81 16 4 1133 257 199 45 8 chr13 71874928 71875060 -48409252 + (TCTA)n Simple_repeat Simple_repeat 3 139 0 4 1133 224 59 29 0 chr13 71875067 71875101 -48409211 + (TC)n Simple_repeat Simple_repeat 2 36 0 4 1133 799 105 41 12 chr13 71875113 71875360 -48408952 + (TCTA)n Simple_repeat Simple_repeat 1 254 0 4 1133 389 170 64 41 chr13 71875406 71875578 -48408734 + (TCTA)n Simple_repeat Simple_repeat 4 179 0 4 1133 579 102 0 0 chr13 71876745 71876833 -48407479 + (TCCC)n Simple_repeat Simple_repeat 1 88 0 4 1133 2449 265 22 38 chr13 71876863 71877574 -48406738 - Lx7 LINE L1 -320 7376 6677 4 1133 689 265 234 41 chr13 71878041 71878379 -48405933 + MTD LTR MaLR 3 405 -14 4 1133 268 215 156 43 chr13 71878819 71878960 -48405352 + Lx8 LINE L1 7315 7471 -2 4 1133 666 272 51 33 chr13 71879231 71879474 -48404838 - ID_B1 SINE B4 -39 253 1 4 1133 27 29 0 0 chr13 71879484 71879518 -48404794 + AT_rich Low_complexity Low_complexity 1 34 0 4 1133 1000 236 68 4 chr13 71879601 71879852 -48404460 - Lx6 LINE L1 -11 7449 7183 4 1133 580 292 25 48 chr13 71880304 71880568 -48403744 - MT2A LTR ERVL -3 598 260 4 1133 509 236 132 10 chr13 71881004 71881187 -48403125 - MTD LTR MaLR -24 395 214 4 1133 407 333 15 8 chr13 71881568 71881698 -48402614 + B3A SINE B2 31 161 -37 4 1133 195 154 62 25 chr13 71882864 71882944 -48401368 + (TCTA)n Simple_repeat Simple_repeat 3 85 0 4 1133 895 285 81 87 chr13 71882960 71883691 -48400621 - L1MA4 LINE L1 -362 5938 5103 4 1133 1229 232 78 24 chr13 71885055 71885390 -48398922 + MTEb LTR MaLR 17 369 -10 4 1133 1106 328 125 31 chr13 71885871 71886687 -48397625 - L1MC3 LINE L1 -1 7784 6864 4 1133 222 91 0 0 chr13 71886687 71886720 -48397592 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1133 1106 328 125 31 chr13 71886720 71887044 -48397268 - L1MC3 LINE L1 -922 6863 6536 4 1133 4072 170 156 7 chr13 71887054 71887878 -48396434 + RLTR25A LTR ERVK 16 944 -159 4 1133 369 0 0 0 chr13 71887878 71887919 -48396393 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1133 4072 170 156 7 chr13 71887919 71888041 -48396271 + RLTR25A LTR ERVK 945 1102 -1 4 1133 24 53 0 0 chr13 71888497 71888535 -48395777 + AT_rich Low_complexity Low_complexity 1 38 0 4 1133 374 311 39 51 chr13 71888542 71888796 -48395516 - L1MC3 LINE L1 -490 5843 5593 4 1133 1042 260 18 35 chr13 71888920 71889203 -48395109 - B4A SINE B4 -14 278 1 4 1133 210 37 0 0 chr13 71889322 71889349 -48394963 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1133 1282 289 134 38 chr13 71889645 71890450 -48393862 - L1MC3 LINE L1 -979 5167 4253 4 1133 356 0 23 0 chr13 71890450 71890494 -48393818 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1133 1282 282 140 37 chr13 71890494 71890563 -48393749 - L1MC3 LINE L1 -1894 4252 4174 4 1133 2316 107 0 0 chr13 71890630 71890949 -48393363 + ORR1A2 LTR MaLR 1 319 -8 4 1133 207 200 0 24 chr13 71891061 71891102 -48393210 + CT-rich Low_complexity Low_complexity 2 41 0 4 1133 747 313 78 34 chr13 71891277 71891843 -48392469 - L1MC3 LINE L1 -2049 4097 3507 4 1133 412 331 35 21 chr13 71892118 71892260 -48392052 - B1F1 SINE Alu -5 144 1 4 1133 330 310 0 0 chr13 71892722 71892822 -48391490 - Lx7 LINE L1 -19 7677 7578 4 1133 480 125 47 0 chr13 71892822 71892950 -48391362 + (TCTA)n Simple_repeat Simple_repeat 1 134 0 4 1133 195 42 0 0 chr13 71893061 71893085 -48391227 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1133 233 291 76 17 chr13 71893239 71893358 -48390954 - L1MC3 LINE L1 -3382 2764 2639 4 1133 301 337 59 33 chr13 71893378 71893648 -48390664 - L1MC3 LINE L1 -3580 2566 2290 4 1133 405 255 30 10 chr13 71893726 71893825 -48390487 - PB1D10 SINE Alu -10 107 7 4 1133 227 316 26 0 chr13 71894033 71894109 -48390203 - MER89 LTR ERV1 -78 481 404 4 1133 1271 251 94 16 chr13 71896316 71896698 -48387614 + MTD LTR MaLR 1 404 -15 4 1133 191 261 43 0 chr13 71896893 71896939 -48387373 - MIRb SINE MIR -176 92 45 4 1133 30 0 0 0 chr13 71897045 71897075 -48387237 + AT_rich Low_complexity Low_complexity 1 30 0 4 1133 183 80 0 0 chr13 71897112 71897137 -48387175 + (GGGA)n Simple_repeat Simple_repeat 1 25 0 4 1133 327 290 10 31 chr13 71897188 71897284 -48387028 - B3 SINE B2 -118 98 5 4 1133 1687 181 83 98 chr13 71897338 71897786 -48386526 + RMER10A LTR ERVL 1 441 -1 4 1133 244 306 0 14 chr13 71897851 71897924 -48386388 - B4A SINE B4 -217 75 4 4 1133 237 65 0 0 chr13 71898373 71898404 -48385908 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1133 204 64 64 0 chr13 71899496 71899543 -48384769 + (TTG)n Simple_repeat Simple_repeat 2 51 0 4 1133 396 0 0 0 chr13 71899549 71899593 -48384719 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 4 1133 245 312 99 12 chr13 71899593 71899674 -48384638 - PB1D10 SINE Alu -17 100 13 4 1133 573 315 144 28 chr13 71900248 71900574 -48383738 + MLT1B LTR MaLR 24 387 -3 4 1133 441 212 30 20 chr13 71900821 71900922 -48383390 - MTEa LTR MaLR 0 379 278 4 1133 418 286 67 0 chr13 71900969 71901074 -48383238 - MTEa LTR MaLR -245 114 3 4 1133 435 188 0 0 chr13 71902572 71902684 -48381628 + GA-rich Low_complexity Low_complexity 2 113 0 4 1133 2381 82 151 0 chr13 71902704 71903021 -48381291 - RLTR8 LTR ERVK 0 365 1 4 1133 301 366 53 64 chr13 71903153 71903495 -48380817 - ORR1E LTR MaLR -12 347 10 4 1133 211 150 25 0 chr13 71903515 71903555 -48380757 + CT-rich Low_complexity Low_complexity 3 43 0 4 1133 27 0 0 0 chr13 71904209 71904236 -48380076 + AT_rich Low_complexity Low_complexity 1 27 0 4 1133 207 0 0 0 chr13 71904253 71904276 -48380036 + (GTTTG)n Simple_repeat Simple_repeat 5 27 0 4 1133 706 268 44 6 chr13 71904883 71905041 -48379271 + B3A SINE B2 2 165 -33 4 1133 419 35 18 0 chr13 71905173 71905230 -48379082 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1133 363 113 0 0 chr13 71906357 71906419 -48377893 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1133 357 24 0 0 chr13 71906505 71906547 -48377765 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1133 358 338 84 54 chr13 71907028 71907865 -48376447 - L1ME1 LINE L1 -1 6178 5317 4 1133 408 323 269 59 chr13 71908008 71908291 -48376021 + ORR1E LTR MaLR 25 367 -12 4 1133 217 89 22 22 chr13 71908487 71908533 -48375779 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 1133 521 270 146 44 chr13 71909594 71909915 -48374397 - L1MB3 LINE L1 -25 6333 5980 4 1133 391 355 19 0 chr13 71909924 71910031 -48374281 + ID_B1 SINE B4 10 118 -106 4 1133 574 274 133 23 chr13 71910128 71910514 -48373798 - L1MB3 LINE L1 -472 5883 5456 4 1133 660 181 59 15 chr13 71911330 71911465 -48372847 - B1_Mur2 SINE Alu -8 141 1 4 1133 238 287 64 9 chr13 71911476 71911585 -48372727 - L1MB3 LINE L1 -4560 1948 1834 4 1133 342 0 0 0 chr13 71911635 71911673 -48372639 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1133 465 345 13 52 chr13 71911840 71912072 -48372240 + ID_B1 SINE B4 2 224 0 4 1133 652 312 82 46 chr13 71913115 71913397 -48370915 + B4A SINE B4 1 292 0 4 1133 429 54 0 0 chr13 71913633 71913689 -48370623 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1133 482 266 181 68 chr13 71914053 71914379 -48369933 + MLT1A LTR MaLR 7 369 -5 4 1133 342 0 0 0 chr13 71916370 71916408 -48367904 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 4 1133 266 262 0 0 chr13 71917182 71917243 -48367069 + RLTR33 LTR ERVK 176 236 -442 4 1133 731 164 29 15 chr13 71917234 71917370 -48366942 + ORR1A1 LTR MaLR 16 153 -193 4 1133 2951 149 12 19 chr13 71917358 71917872 -48366440 - ORR1A2-int LTR MaLR -1453 510 1 4 1133 2319 120 6 58 chr13 71917872 71918217 -48366095 - ORR1A2 LTR MaLR 0 327 1 4 1133 1513 213 139 19 chr13 71918217 71918591 -48365721 + RLTR33 LTR ERVK 237 655 -23 4 1133 474 18 0 0 chr13 71919344 71919399 -48364913 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1133 695 343 37 21 chr13 71919574 71919701 -48364611 + MTE-int LTR MaLR 14 149 -1431 4 1133 1260 50 0 0 chr13 71919701 71919841 -48364471 + B1_Mus2 SINE Alu 1 140 -7 4 1133 270 0 0 0 chr13 71919845 71919875 -48364437 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 5 1133 695 343 37 21 chr13 71919875 71920067 -48364245 + MTE-int LTR MaLR 150 340 -1240 4 1133 1180 78 14 0 chr13 71921053 71921195 -48363117 + B1_Mus1 SINE Alu 1 144 -4 5 1133 327 49 0 0 chr13 71921399 71921440 -48362872 + (TA)n Simple_repeat Simple_repeat 2 42 0 5 1133 228 260 144 0 chr13 71924399 71924503 -48359809 - L1MD LINE L1 -2233 5762 5644 5 1133 1604 321 135 23 chr13 71924982 71926005 -48358307 + Lx8 LINE L1 6357 7443 -30 5 1133 280 334 90 7 chr13 71926059 71926271 -48358041 - ORR1D2 LTR MaLR -114 245 5 5 1133 447 19 0 0 chr13 71926849 71926901 -48357411 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1133 374 268 137 30 chr13 71927863 71927994 -48356318 + Tigger5 DNA MER2_type 47 191 -2215 5 1133 1632 303 88 66 chr13 71928173 71929207 -48355105 + Lx9 LINE L1 6370 7467 -6 5 1133 2978 285 140 38 chr13 71929210 71930857 -48353455 + Charlie12 DNA MER1_type 959 2773 -100 5 1133 2070 271 67 79 chr13 71932089 71933509 -48350803 + Lx9 LINE L1 3178 4568 -1572 5 1133 1220 275 47 42 chr13 71933518 71933970 -48350342 + Lx9 LINE L1 5637 6090 -1554 5 1133 1070 199 120 4 chr13 71934076 71934343 -48349969 + Lx9 LINE L1 7338 7635 -9 5 1133 593 206 106 8 chr13 71934341 71934473 -48349839 + Lx9 LINE L1 7112 7256 -388 5 1133 1075 172 214 43 chr13 71934919 71935131 -48349181 + Lx9 LINE L1 7257 7478 -166 5 1133 351 0 0 0 chr13 71935131 71935170 -48349142 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1133 369 62 0 0 chr13 71935174 71935222 -48349090 + (CCA)n Simple_repeat Simple_repeat 1 48 0 5 1133 1075 172 214 43 chr13 71935222 71935326 -48348986 + Lx9 LINE L1 7479 7622 -22 5 1133 1334 41 6 0 chr13 71935326 71935495 -48348817 + (GAAA)n Simple_repeat Simple_repeat 2 171 0 5 1133 252 0 0 0 chr13 71937399 71937427 -48346885 + (TC)n Simple_repeat Simple_repeat 2 29 0 5 1133 968 289 44 85 chr13 71938040 71938430 -48345882 - MTEb LTR MaLR 0 379 6 5 1133 600 136 63 3 chr13 71939521 71939863 -48344449 + (TAGA)n Simple_repeat Simple_repeat 1 362 0 5 1133 1095 195 20 5 chr13 71940279 71940480 -48343832 + B3 SINE B2 1 204 -12 5 1133 227 203 0 17 chr13 71940491 71940551 -48343761 + GA-rich Low_complexity Low_complexity 3 61 0 5 1133 441 215 11 92 chr13 71943303 71943378 -48340934 - Lx9 LINE L1 -8 7636 7575 5 1133 2983 70 8 8 chr13 71943378 71943750 -48340562 - L1Md_F2 LINE L1 -12 6570 6199 5 1133 429 187 68 48 chr13 71943750 71943911 -48340401 - Lx9 LINE L1 -70 7574 7348 5 1133 186 103 0 0 chr13 71943923 71943952 -48340360 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1133 1065 283 84 3 chr13 71944605 71944952 -48339360 + MTE2b LTR MaLR 1 375 -4 5 1133 423 318 120 15 chr13 71946996 71947405 -48336907 - L1MD3 LINE L1 -2066 5929 5478 5 1133 875 302 96 49 chr13 71948024 71948744 -48335568 - L1MD3 LINE L1 -1052 5094 4341 5 1133 2552 176 126 24 chr13 71949009 71949557 -48334755 - RMER19C LTR ERVK 0 611 8 5 1133 384 77 0 0 chr13 71949586 71949638 -48334674 + (A)n Simple_repeat Simple_repeat 1 52 0 5 1133 585 0 0 0 chr13 71949891 71949956 -48334356 + (TC)n Simple_repeat Simple_repeat 1 65 0 5 1133 22 56 0 0 chr13 71950763 71950799 -48333513 + AT_rich Low_complexity Low_complexity 1 36 0 5 1133 3658 71 2 20 chr13 71951679 71952168 -48332144 + L1_Mus1 LINE L1 6088 6567 0 5 1133 1120 238 106 26 chr13 71952562 71952911 -48331401 - MTE2b LTR MaLR -2 377 1 5 1133 218 274 0 0 chr13 71953243 71953294 -48331018 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1133 822 290 43 14 chr13 71954476 71954752 -48329560 + B4 SINE B4 1 284 -8 5 1133 23 33 0 0 chr13 71955532 71955562 -48328750 + AT_rich Low_complexity Low_complexity 1 30 0 5 1133 24 53 0 0 chr13 71955643 71955681 -48328631 + AT_rich Low_complexity Low_complexity 1 38 0 5 1133 204 40 0 0 chr13 71956485 71956510 -48327802 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 5 1134 7888 51 20 4 chr13 71958564 71959580 -48324732 - L1_Mus1 LINE L1 0 6567 5536 5 1134 1960 308 49 54 chr13 71959661 71960451 -48323861 - Lx8 LINE L1 -121 7352 6567 5 1134 543 31 0 0 chr13 71960954 71961019 -48323293 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1134 381 43 0 0 chr13 71961019 71961065 -48323247 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 1134 343 335 49 37 chr13 71961118 71961282 -48323030 + B4 SINE B4 1 166 -126 5 1134 738 236 19 0 chr13 71962167 71962324 -48321988 + B3 SINE B2 1 160 -56 5 1134 258 32 0 0 chr13 71966395 71966426 -48317886 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1134 432 0 0 0 chr13 71966426 71966473 -48317839 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1134 360 333 59 0 chr13 71966484 71966619 -48317693 + B4A SINE B4 1 143 -149 5 1134 3053 75 6 1 chr13 71966707 71967111 -48317201 - L1_Mus3 LINE L1 -459 6179 5784 5 1134 468 77 0 0 chr13 71968302 71968367 -48315945 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1134 551 338 39 65 chr13 71968376 71968636 -48315676 - B4 SINE B4 0 292 40 5 1134 1193 101 0 6 chr13 71968733 71968913 -48315399 + (GAA)n Simple_repeat Simple_repeat 1 179 0 5 1134 4870 35 16 0 chr13 71969741 71970316 -48313996 - L1Md_F2 LINE L1 -16 6566 5983 5 1134 1346 287 64 40 chr13 71970321 71971126 -48313186 - Lx8 LINE L1 -1306 6167 5315 5 1134 411 21 0 0 chr13 71971425 71971473 -48312839 + (GGGA)n Simple_repeat Simple_repeat 3 50 0 5 1134 496 327 58 0 chr13 71972896 71973052 -48311260 - B4 SINE B4 -4 288 124 5 1134 927 279 95 7 chr13 71973231 71973255 -48311057 + Lx8 LINE L1 6326 6349 -1124 5 1134 1749 195 78 18 chr13 71973255 71973652 -48310660 - MTC LTR MaLR 0 421 1 5 1134 927 316 131 20 chr13 71973652 71974462 -48309850 + Lx8 LINE L1 6350 7292 -181 5 1134 1759 79 9 0 chr13 71974479 71974707 -48309605 - L1_Mus1 LINE L1 -1 6566 6337 5 1134 10932 80 9 38 chr13 71974707 71977087 -48307225 - L1VL1 LINE L1 -3149 2734 416 5 1134 1237 41 0 0 chr13 71977330 71977477 -48306835 - B1_Mm SINE Alu 0 147 1 5 1134 251 260 61 61 chr13 71977477 71977641 -48306671 + L1MDa LINE L1 2403 2566 -4067 5 1134 231 36 0 0 chr13 71977801 71977829 -48306483 + (TGG)n Simple_repeat Simple_repeat 1 28 0 5 1134 202 212 30 15 chr13 71978586 71978653 -48305659 + T-rich Low_complexity Low_complexity 6 73 0 5 1134 2374 97 48 0 chr13 71979049 71979401 -48304911 + L1_Mus3 LINE L1 6269 6637 -1 5 1134 1097 261 110 26 chr13 71979991 71980337 -48303975 + MTE2b LTR MaLR 1 375 -4 5 1134 7214 64 0 2 chr13 71980726 71981616 -48302696 + L1_Mus1 LINE L1 5671 6558 -9 5 1134 378 323 44 0 chr13 71982802 71982960 -48301352 - Lx8 LINE L1 -122 7351 7187 5 1134 630 307 113 25 chr13 71983048 71983332 -48300980 + Lx8 LINE L1 6643 6951 -522 5 1134 3594 133 36 25 chr13 71983686 71983883 -48300429 + L1_Mur2 LINE L1 3952 4166 -1711 5 1134 2587 107 0 0 chr13 71983883 71984246 -48300066 - RLTR8 LTR ERVK 0 365 3 5 1134 3594 133 36 25 chr13 71984246 71984690 -48299622 + L1_Mur2 LINE L1 4167 4600 -1277 5 1134 189 163 20 39 chr13 71991513 71991564 -48292748 - MIRc SINE MIR -137 131 82 5 1134 189 121 0 0 chr13 71994866 71994899 -48289413 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1134 432 280 0 0 chr13 71995827 71995945 -48288367 + B4A SINE B4 146 263 -29 5 1134 321 208 0 0 chr13 71995985 71996057 -48288255 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 1134 216 0 0 0 chr13 71996208 71996232 -48288080 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1134 1005 283 29 29 chr13 71996307 71996649 -48287663 + MTEa LTR MaLR 38 379 0 5 1134 407 395 58 6 chr13 71996975 71997286 -48287026 + MER2 DNA MER2_type 14 340 -5 5 1134 246 396 6 6 chr13 71998944 71999109 -48285203 + CT-rich Low_complexity Low_complexity 3 167 0 5 1134 233 340 47 9 chr13 71999150 71999257 -48285055 + MER70B LTR ERVL 353 463 -115 5 1134 185 215 0 15 chr13 71999276 71999311 -48285001 + polypyrimidine Low_complexity Low_complexity 33 66 0 5 1134 1021 114 11 6 chr13 71999311 71999488 -48284824 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 5 1134 185 215 0 15 chr13 71999488 71999518 -48284794 + polypyrimidine Low_complexity Low_complexity 3 32 0 5 1134 735 197 0 0 chr13 71999518 71999696 -48284616 + CT-rich Low_complexity Low_complexity 1 178 0 5 1134 237 139 0 0 chr13 71999698 71999741 -48284571 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 5 1134 863 215 55 5 chr13 72001549 72001750 -48282562 + URR1B DNA MER1_type 7 217 -8 1 1134 246 331 57 7 chr13 72002301 72002441 -48281871 + MTE-int LTR MaLR 1274 1420 -160 2 1134 2078 100 29 0 chr13 72004068 72004378 -48279934 - ORR1A2 LTR MaLR -8 319 1 3 1134 379 253 21 0 chr13 72004684 72004779 -48279533 + ORR1A4 LTR MaLR 1 97 -282 4 1134 721 238 117 119 chr13 72004829 72005172 -48279140 - MTE2a LTR MaLR -31 348 7 5 1134 631 179 115 6 chr13 72005225 72005382 -48278930 + RMER19C LTR ERVK 1 174 -437 6 1134 1352 160 4 0 chr13 72005371 72005608 -48278704 + ORR1A4 LTR MaLR 88 325 -4 4 1134 412 268 167 19 chr13 72006049 72006205 -48278107 - B3A SINE B2 -18 180 2 7 1134 564 302 75 37 chr13 72007442 72007683 -48276629 + B4A SINE B4 36 285 -7 8 1134 441 0 0 0 chr13 72007716 72007765 -48276547 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 1134 352 327 6 0 chr13 72008156 72008318 -48275994 + (TG)n Simple_repeat Simple_repeat 1 163 0 1 1134 2051 144 22 0 chr13 72008940 72009259 -48275053 + ORR1A3 LTR MaLR 1 326 0 1 1134 308 368 32 16 chr13 72010005 72010193 -48274119 - MLT1B LTR MaLR -9 381 191 1 1134 5889 68 12 4 chr13 72010238 72011010 -48273302 + Lx3_Mus LINE L1 6232 7009 0 1 1134 513 0 0 0 chr13 72011418 72011475 -48272837 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1134 1453 208 152 0 chr13 72011475 72011831 -48272481 - MTD LTR MaLR -5 414 5 1 1134 476 325 6 11 chr13 72011835 72012009 -48272303 + (TG)n Simple_repeat Simple_repeat 1 173 0 1 1134 347 249 6 28 chr13 72012041 72012223 -48272089 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 1 1134 278 308 0 21 chr13 72012249 72012342 -48271970 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 1 1134 341 253 33 0 chr13 72012416 72012507 -48271805 - B1F SINE Alu -7 142 49 1 1134 392 145 41 7 chr13 72013927 72014073 -48270239 + (TAGA)n Simple_repeat Simple_repeat 2 152 0 1 1134 1033 112 28 0 chr13 72014113 72014402 -48269910 + (TAGA)n Simple_repeat Simple_repeat 1 297 0 1 1134 486 0 0 0 chr13 72014581 72014635 -48269677 + (TC)n Simple_repeat Simple_repeat 2 55 0 2 1134 195 42 0 0 chr13 72014636 72014660 -48269652 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1134 1699 227 50 13 chr13 72016537 72016934 -48267378 + MTD LTR MaLR 1 412 -7 2 1134 32751 51 43 5 chr13 72016960 72022382 -48261930 + L1Md_T LINE L1 1 5589 -297 2 1134 8572 31 2 0 chr13 72022382 72023376 -48260936 + L1Md_T LINE L1 5590 6585 0 2 1134 325 307 34 0 chr13 72023700 72023788 -48260524 + B3A SINE B2 2 92 -106 2 1134 396 0 0 0 chr13 72023788 72023832 -48260480 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1134 405 0 0 0 chr13 72023832 72023876 -48260436 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1134 21 0 0 0 chr13 72023903 72023924 -48260388 + AT_rich Low_complexity Low_complexity 1 21 0 2 1134 2166 166 56 13 chr13 72024097 72024487 -48259825 - MTB_Mm LTR MaLR 0 407 1 2 1134 981 201 58 0 chr13 72024876 72025065 -48259247 + MTC LTR MaLR 96 295 -126 2 1134 207 297 10 29 chr13 72025329 72025433 -48258879 + GA-rich Low_complexity Low_complexity 3 104 0 3 1134 661 256 8 0 chr13 72026260 72026393 -48257919 + RSINE1 SINE B4 2 135 -30 3 1134 303 150 0 0 chr13 72026393 72026453 -48257859 + (TG)n Simple_repeat Simple_repeat 1 60 0 3 1134 317 303 20 10 chr13 72026666 72026766 -48257546 + PB1D10 SINE Alu 6 106 -11 3 1134 440 309 33 7 chr13 72027165 72027315 -48256997 + RSINE1 SINE B4 2 155 -10 3 1134 437 329 75 38 chr13 72027579 72027977 -48256335 + L1ME2 LINE L1 5728 6140 -24 3 1134 341 268 211 26 chr13 72029514 72029779 -48254533 + L1M5 LINE L1 2748 3061 -3085 3 1134 310 254 88 76 chr13 72030171 72030406 -48253906 + L1MA7 LINE L1 5992 6237 -63 3 1134 232 363 0 0 chr13 72030408 72030543 -48253769 + (TG)n Simple_repeat Simple_repeat 1 135 0 3 1134 353 22 0 21 chr13 72030600 72030647 -48253665 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 3 1134 3888 129 45 3 chr13 72031226 72031854 -48252458 - RMER19A LTR ERVK 0 737 84 4 1134 209 248 13 58 chr13 72032783 72032937 -48251375 + CT-rich Low_complexity Low_complexity 3 149 0 4 1134 5337 221 73 12 chr13 72033051 72034770 -48249542 + Lx7 LINE L1 5170 6994 -702 4 1134 303 208 0 40 chr13 72034769 72034844 -48249468 + Lx7 LINE L1 7245 7316 -380 4 1134 1376 238 31 14 chr13 72034830 72035124 -48249188 - Lx7 LINE L1 -1006 6690 6392 4 1134 1665 238 96 52 chr13 72035124 72035801 -48248511 + Lx7 LINE L1 6990 7696 0 4 1134 192 158 0 0 chr13 72036154 72036192 -48248120 + GA-rich Low_complexity Low_complexity 5 42 0 4 1134 237 195 0 0 chr13 72036938 72036979 -48247333 + B3A SINE B2 1 41 -157 4 1134 337 171 23 0 chr13 72036991 72037079 -48247233 + (TATG)n Simple_repeat Simple_repeat 1 90 0 4 1134 287 318 12 0 chr13 72037245 72037330 -48246982 + B3A SINE B2 27 112 -86 4 1134 315 0 0 0 chr13 72037431 72037466 -48246846 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1134 356 284 18 24 chr13 72037573 72037739 -48246573 + (CATA)n Simple_repeat Simple_repeat 4 168 0 5 1134 740 232 64 6 chr13 72039249 72039422 -48244890 + B3A SINE B2 1 183 -15 5 1134 224 277 0 0 chr13 72039424 72039471 -48244841 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1134 946 242 67 139 chr13 72039775 72040178 -48244134 - MTE2a LTR MaLR -3 376 3 5 1134 944 251 144 36 chr13 72040237 72040571 -48243741 - ORR1D2 LTR MaLR 0 370 1 5 1134 575 265 88 20 chr13 72041555 72041759 -48242553 + ID_B1 SINE B4 1 218 -6 5 1134 678 85 47 0 chr13 72043345 72043474 -48240838 + (TG)n Simple_repeat Simple_repeat 1 135 0 5 1134 350 188 10 0 chr13 72043511 72043612 -48240700 + (TG)n Simple_repeat Simple_repeat 2 103 0 5 1134 964 249 15 5 chr13 72044337 72044543 -48239769 - B3 SINE B2 -7 209 2 5 1134 2777 199 137 3 chr13 72046349 72046953 -48237359 + RMER1B Other Other 382 1066 0 5 1134 226 235 29 29 chr13 72047361 72047431 -48236881 + L1MA7 LINE L1 6030 6099 -192 5 1134 459 0 0 0 chr13 72048187 72048238 -48236074 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1134 468 35 0 0 chr13 72048981 72049039 -48235273 + (TCTG)n Simple_repeat Simple_repeat 3 60 0 6 1134 1394 203 122 40 chr13 72049773 72049793 -48234519 + ORR1C2 LTR MaLR 1 34 -350 6 1134 234 0 0 0 chr13 72049793 72049819 -48234493 + (TA)n Simple_repeat Simple_repeat 2 27 0 6 1134 423 0 0 0 chr13 72049819 72049865 -48234447 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1134 1394 203 122 40 chr13 72049865 72050197 -48234115 + ORR1C2 LTR MaLR 35 382 -2 6 1134 354 215 0 37 chr13 72050857 72050939 -48233373 + B1F1 SINE Alu 66 144 -5 6 1134 184 182 234 0 chr13 72053510 72053587 -48230725 - L3 LINE CR1 -4273 216 122 6 1134 192 77 0 0 chr13 72055014 72055040 -48229272 + (TGG)n Simple_repeat Simple_repeat 1 26 0 6 1134 301 331 114 27 chr13 72055215 72055619 -48228693 + L1MA9 LINE L1 5512 5950 -362 6 1134 291 299 128 22 chr13 72055624 72055850 -48228462 + L1MA9 LINE L1 6062 6311 -1 6 1134 1508 306 62 25 chr13 72055908 72056431 -48227881 + Lx9 LINE L1 6927 7526 -118 6 1134 242 279 59 0 chr13 72056431 72056499 -48227813 - RSINE1 SINE B4 0 165 94 7 1134 1508 306 62 25 chr13 72056499 72056599 -48227713 + Lx9 LINE L1 7527 7643 -1 6 1134 432 0 0 0 chr13 72057863 72057911 -48226401 + (TA)n Simple_repeat Simple_repeat 2 49 0 7 1134 211 308 63 13 chr13 72058798 72058877 -48225435 + MIRc SINE MIR 66 148 -120 7 1134 971 236 73 76 chr13 72060418 72060707 -48223605 + MTD LTR MaLR 118 405 -14 7 1134 2736 98 66 0 chr13 72064539 72064918 -48219394 - MTB_Mm LTR MaLR -3 404 1 7 1134 214 88 35 81 chr13 72065696 72065783 -48218529 + T-rich Low_complexity Low_complexity 2 84 0 7 1134 327 237 13 26 chr13 72065868 72065946 -48218366 - B4A SINE B4 -207 85 9 7 1134 301 289 12 12 chr13 72067049 72067133 -48217179 - MLT1A0 LTR MaLR -57 308 225 7 1134 241 240 118 13 chr13 72067147 72067223 -48217089 + MLT1A1 LTR MaLR 20 103 -305 7 1134 408 326 27 20 chr13 72068152 72068302 -48216010 + MLT1B LTR MaLR 23 173 -217 7 1134 459 181 21 21 chr13 72068314 72068410 -48215902 - Lx7 LINE L1 -546 7150 7055 8 1134 23 0 0 0 chr13 72068415 72068438 -48215874 + AT_rich Low_complexity Low_complexity 1 23 0 8 1134 375 241 216 35 chr13 72068731 72068847 -48215465 + B1F1 SINE Alu 8 144 -5 8 1134 236 301 0 67 chr13 72068901 72068990 -48215322 + ID4 SINE ID 1 83 0 8 1134 248 184 0 39 chr13 72071405 72071456 -48212856 + G-rich Low_complexity Low_complexity 2 50 0 8 1134 194 231 111 37 chr13 72072207 72072288 -48212024 + L3 LINE CR1 3315 3401 -1088 8 1134 450 314 14 14 chr13 72072343 72072482 -48211830 + ORR1E LTR MaLR 47 185 -174 8 1134 207 227 0 0 chr13 72072507 72072604 -48211708 + CT-rich Low_complexity Low_complexity 1 97 0 8 1134 547 89 0 114 chr13 72072586 72072788 -48211524 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 8 1134 246 178 0 45 chr13 72072859 72072971 -48211341 + (TCTCTG)n Simple_repeat Simple_repeat 2 108 0 8 1134 212 154 21 52 chr13 72073016 72073112 -48211200 + (TCTCTG)n Simple_repeat Simple_repeat 2 94 0 8 1134 1084 298 71 48 chr13 72073995 72074516 -48209796 - MT2A LTR ERVL 0 533 1 9 1134 889 203 51 20 chr13 72074717 72074913 -48209399 - B3 SINE B2 -6 210 9 9 1134 458 195 11 29 chr13 72075255 72075284 -48209028 + (CA)n Simple_repeat Simple_repeat 1 28 0 9 1134 492 18 0 0 chr13 72075284 72075341 -48208971 + (TC)n Simple_repeat Simple_repeat 1 57 0 9 1134 458 195 11 29 chr13 72075341 72075485 -48208827 + (CA)n Simple_repeat Simple_repeat 1 142 0 9 1134 435 229 14 7 chr13 72075507 72075652 -48208660 + (CA)n Simple_repeat Simple_repeat 2 147 0 9 1134 3261 143 19 8 chr13 72075824 72076347 -48207965 + Lx4A LINE L1 6526 7054 -4 9 1134 21 36 0 0 chr13 72076347 72076375 -48207937 + AT_rich Low_complexity Low_complexity 1 28 0 9 1134 669 35 0 0 chr13 72076396 72076482 -48207830 - L1Md_A LINE L1 -1 6581 6496 9 1134 278 339 18 0 chr13 72076708 72076817 -48207495 - L1MA6 LINE L1 -100 6200 6090 9 1134 1954 221 17 57 chr13 72077291 72077766 -48206546 + RMER19C LTR ERVK 138 593 -18 9 1134 1266 41 0 0 chr13 72077767 72077912 -48206400 + B1_Mus2 SINE Alu 1 145 -2 1 1134 236 289 81 46 chr13 72078534 72078621 -48205691 - ORR1B1 LTR MaLR -57 337 248 1 1134 453 162 26 13 chr13 72081915 72082071 -48202241 + (CA)n Simple_repeat Simple_repeat 2 159 0 1 1134 414 0 0 0 chr13 72082136 72082182 -48202130 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1134 313 308 31 16 chr13 72082627 72083602 -48200710 + (CATGC)n Simple_repeat Simple_repeat 1 989 0 1 1134 276 315 33 9 chr13 72083655 72083990 -48200322 + (CATGC)n Simple_repeat Simple_repeat 1 343 0 1 1134 236 264 122 43 chr13 72084588 72084703 -48199609 + MLT2B5 LTR ERVL 128 251 -350 1 1134 281 282 46 66 chr13 72085484 72085636 -48198676 - MER121 Unknown Unknown -133 279 131 1 1134 229 333 46 82 chr13 72085702 72085921 -48198391 + MER121 Unknown Unknown 146 356 -56 1 1134 819 283 62 31 chr13 72085936 72086195 -48198117 + B4A SINE B4 1 267 -25 1 1134 271 131 0 77 chr13 72086199 72086290 -48198022 + GA-rich Low_complexity Low_complexity 1 84 0 1 1134 278 159 0 14 chr13 72086599 72086669 -48197643 + GA-rich Low_complexity Low_complexity 1 69 0 1 1135 189 0 0 0 chr13 72093111 72093132 -48191180 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1135 23 0 0 0 chr13 72093250 72093273 -48191039 + AT_rich Low_complexity Low_complexity 1 23 0 1 1135 219 36 0 0 chr13 72094256 72094284 -48190028 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 1135 197 33 33 0 chr13 72094476 72094506 -48189806 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1135 224 182 0 43 chr13 72095990 72096036 -48188276 + C-rich Low_complexity Low_complexity 2 45 0 1 1135 214 208 38 0 chr13 72097746 72097799 -48186513 + GA-rich Low_complexity Low_complexity 2 56 0 1 1135 258 32 0 0 chr13 72099152 72099183 -48185129 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1135 43 35 0 0 chr13 72101017 72101074 -48183238 + GC_rich Low_complexity Low_complexity 1 57 0 1 1135 258 209 29 15 chr13 72101235 72101303 -48183009 + C-rich Low_complexity Low_complexity 3 71 0 1 1135 423 38 0 0 chr13 72106308 72106361 -48177951 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1135 1232 14 0 7 chr13 72108338 72108485 -48175827 + (TTC)n Simple_repeat Simple_repeat 3 148 0 1 1135 452 302 87 0 chr13 72110094 72110220 -48174092 + ORR1E LTR MaLR 1 137 -222 1 1135 244 315 86 69 chr13 72110443 72110617 -48173695 + RLTR22_Mur LTR ERVK 1580 1756 -92 1 1135 294 289 20 100 chr13 72110948 72111098 -48173214 - B1F1 SINE Alu 0 149 12 1 1135 764 297 5 9 chr13 72111181 72111392 -48172920 + B3 SINE B2 3 212 -4 1 1135 29 0 0 0 chr13 72111576 72111605 -48172707 + AT_rich Low_complexity Low_complexity 1 29 0 1 1135 530 0 14 0 chr13 72111743 72111813 -48172499 - L1Md_F2 LINE L1 0 6582 6512 1 1135 1518 237 41 18 chr13 72111819 72112214 -48172098 + MTD LTR MaLR 13 402 -17 1 1135 860 267 124 39 chr13 72113715 72114151 -48170161 - L1MA8 LINE L1 -267 6024 5552 1 1135 435 119 0 0 chr13 72114297 72114364 -48169948 + (CATA)n Simple_repeat Simple_repeat 2 68 0 1 1135 34 0 0 0 chr13 72115104 72115138 -48169174 + AT_rich Low_complexity Low_complexity 1 34 0 1 1135 471 18 0 0 chr13 72116119 72116175 -48168137 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1135 267 273 69 69 chr13 72121001 72121131 -48163181 - B3 SINE B2 -6 210 81 1 1135 198 0 0 0 chr13 72123254 72123276 -48161036 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 1135 327 228 82 57 chr13 72123511 72123669 -48160643 - L1MC1 LINE L1 -432 6076 5915 1 1135 530 316 6 50 chr13 72124054 72124214 -48160098 - B3A SINE B2 -44 154 2 1 1135 292 239 15 0 chr13 72124242 72124309 -48160003 - L1MC1 LINE L1 -632 5876 5809 1 1135 264 301 64 55 chr13 72124716 72124934 -48159378 - L1MC1 LINE L1 -1780 4541 4322 1 1135 499 234 71 59 chr13 72124983 72125306 -48159006 - L1MC1 LINE L1 -2191 4130 3804 1 1135 373 42 0 0 chr13 72125347 72125395 -48158917 - ORR1A4 LTR MaLR -8 321 274 1 1135 28505 132 13 10 chr13 72125403 72131621 -48152691 - L1_Mus3 LINE L1 0 6638 396 1 1135 1483 146 58 14 chr13 72131621 72131899 -48152413 - ORR1A4 LTR MaLR -39 290 1 1 1135 211 67 0 62 chr13 72132130 72132178 -48152134 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 1 1135 1171 294 70 74 chr13 72132178 72133226 -48151086 - L1MC1 LINE L1 -2802 3519 2477 1 1135 4447 36 0 8 chr13 72133914 72134446 -48149866 + L1Md_F3 LINE L1 6056 6583 -1 1 1135 741 281 23 19 chr13 72134494 72134708 -48149604 - B3 SINE B2 0 216 2 1 1135 24 0 0 0 chr13 72134718 72134742 -48149570 + AT_rich Low_complexity Low_complexity 1 24 0 1 1135 346 237 35 17 chr13 72135033 72135149 -48149163 - Lx9 LINE L1 -128 7516 7399 1 1135 417 193 53 18 chr13 72135328 72135497 -48148815 + CT-rich Low_complexity Low_complexity 3 177 0 1 1135 317 355 69 27 chr13 72135624 72135812 -48148500 - L1MC1 LINE L1 -4948 1560 1365 1 1135 301 233 54 70 chr13 72135844 72135973 -48148339 - L1MC1 LINE L1 -5136 1372 1246 1 1135 288 288 27 0 chr13 72137076 72137149 -48147163 - ID4 SINE ID -3 80 6 1 1135 315 279 81 0 chr13 72137184 72137295 -48147017 - PB1 SINE Alu -5 122 3 1 1135 567 253 15 0 chr13 72139422 72139568 -48144744 + B1F SINE Alu 1 148 -1 1 1135 248 77 0 25 chr13 72139606 72139646 -48144666 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 1 1135 405 145 30 127 chr13 72139688 72139822 -48144490 + Lx9 LINE L1 7517 7637 -7 1 1135 631 306 81 16 chr13 72139943 72140312 -48144000 + L1MA5 LINE L1 4912 5304 -839 1 1135 758 62 0 65 chr13 72140334 72140472 -48143840 + (GAAAA)n Simple_repeat Simple_repeat 1 129 0 1 1135 370 323 74 13 chr13 72140695 72140924 -48143388 + L1MA5 LINE L1 5751 5993 -307 1 1135 259 269 103 39 chr13 72141038 72141193 -48143119 + L1MA6 LINE L1 5596 5760 -540 1 1135 228 100 0 0 chr13 72141194 72141224 -48143088 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1135 465 103 0 0 chr13 72141224 72141292 -48143020 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1135 456 19 0 0 chr13 72141355 72141408 -48142904 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1135 454 313 116 34 chr13 72141414 72141881 -48142431 + L1MA6 LINE L1 5781 6285 -15 1 1135 22 0 0 0 chr13 72141910 72141932 -48142380 + AT_rich Low_complexity Low_complexity 1 22 0 1 1135 229 146 0 0 chr13 72142450 72142491 -48141821 + L1MA6 LINE L1 6254 6294 -6 1 1135 5402 18 2 2 chr13 72142880 72143491 -48140821 + L1Md_F3 LINE L1 5958 6568 -16 1 1135 3706 37 7 0 chr13 72143491 72143924 -48140388 - RLTR10C LTR ERVK 0 436 1 1 1135 7613 36 9 51 chr13 72143924 72144896 -48139416 - MMERVK10C-int LTR ERVK 0 7581 6651 1 1135 467 62 0 0 chr13 72144887 72144951 -48139361 - MMERVK10C-int LTR ERVK -1771 5810 5747 1 1135 3297 44 4 134 chr13 72144963 72145464 -48138848 - RLTR10C LTR ERVK 0 436 1 1 1135 194 327 0 0 chr13 72146259 72146314 -48137998 - L2b LINE L2 -12 3363 3309 1 1135 22 0 0 0 chr13 72147185 72147207 -48137105 + AT_rich Low_complexity Low_complexity 1 22 0 1 1135 339 127 0 0 chr13 72147343 72147406 -48136906 + (TGG)n Simple_repeat Simple_repeat 2 64 0 1 1135 2011 186 37 10 chr13 72147560 72148204 -48136108 - L1_Mur2 LINE L1 -4188 1689 1065 1 1135 7371 45 5 3 chr13 72148211 72149109 -48135203 - L1Md_F2 LINE L1 -2 6580 5682 1 1135 1014 296 47 63 chr13 72149099 72149528 -48134784 - L1_Mur2 LINE L1 -6028 1058 637 1 1135 1277 258 28 85 chr13 72149594 72150002 -48134310 - L1_Rod LINE L1 -132 5715 5334 1 1135 812 85 8 0 chr13 72150002 72150120 -48134192 + (TTTC)n Simple_repeat Simple_repeat 3 121 0 1 1135 1277 258 28 85 chr13 72150120 72150206 -48134106 - L1_Rod LINE L1 -514 5333 5249 1 1135 189 0 0 0 chr13 72150206 72150227 -48134085 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1 1135 1084 274 35 33 chr13 72150274 72150751 -48133561 - Lx7 LINE L1 -66 7630 7044 1 1135 458 276 41 103 chr13 72150759 72150953 -48133359 - B3 SINE B2 -5 190 9 1 1135 183 242 0 0 chr13 72150995 72151094 -48133218 + (TCTG)n Simple_repeat Simple_repeat 4 102 0 1 1135 484 275 53 15 chr13 72153806 72153939 -48130373 + ID_B1 SINE B4 3 140 -84 1 1135 338 302 94 0 chr13 72154095 72154201 -48130111 + B1F SINE Alu 10 125 -24 1 1135 213 39 0 0 chr13 72154201 72154227 -48130085 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 1 1135 550 231 39 58 chr13 72154237 72154393 -48129919 + B3A SINE B2 3 155 -43 1 1135 622 289 126 40 chr13 72156254 72156588 -48127724 + ORR1D2 LTR MaLR 1 355 -4 1 1135 250 287 21 21 chr13 72156669 72156821 -48127491 + (TG)n Simple_repeat Simple_repeat 1 152 0 1 1135 435 248 10 0 chr13 72156868 72156969 -48127343 + MTD LTR MaLR 1 102 -317 1 1135 342 179 16 13 chr13 72156969 72157054 -48127258 - ORR1D1 LTR MaLR 0 384 286 1 1135 249 246 0 55 chr13 72157078 72157151 -48127161 - ORR1D1 LTR MaLR -301 69 1 1 1135 3895 248 36 39 chr13 72157133 72158277 -48126035 - ORR1D1-int LTR MaLR -3 1367 227 1 1135 1134 233 104 0 chr13 72158324 72158445 -48125867 - ORR1D1 LTR MaLR -53 321 182 1 1135 414 0 0 0 chr13 72158445 72158491 -48125821 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1135 1134 233 104 0 chr13 72158491 72158656 -48125656 - ORR1D1 LTR MaLR -193 181 6 1 1135 348 332 142 0 chr13 72158650 72158861 -48125451 - ORR1D1-int LTR MaLR -1129 241 1 1 1135 1055 234 137 9 chr13 72158861 72159189 -48125123 - ORR1D1 LTR MaLR 0 370 1 1 1135 708 318 77 27 chr13 72159189 72159486 -48124826 + MTEb LTR MaLR 51 362 -17 1 1135 422 326 64 48 chr13 72159713 72159900 -48124412 - B3A SINE B2 -7 191 2 1 1135 661 299 59 0 chr13 72162757 72162961 -48121351 - B3 SINE B2 0 216 1 1 1135 890 244 42 153 chr13 72163597 72164023 -48120289 - MTE2a LTR MaLR 0 379 1 1 1135 555 56 0 0 chr13 72164885 72164956 -48119356 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 1 1135 235 155 35 23 chr13 72165671 72165757 -48118555 + CT-rich Low_complexity Low_complexity 2 88 0 1 1135 234 245 19 0 chr13 72167081 72167134 -48117178 + C-rich Low_complexity Low_complexity 4 57 0 1 1135 232 362 9 0 chr13 72167350 72167466 -48116846 + (CA)n Simple_repeat Simple_repeat 1 117 0 1 1135 192 176 37 56 chr13 72167557 72167611 -48116701 - L4 LINE RTE -195 1834 1782 1 1135 527 347 25 71 chr13 72168653 72168935 -48115377 + B4A SINE B4 8 276 -16 1 1135 197 65 32 0 chr13 72169320 72169351 -48114961 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1 1135 423 0 0 0 chr13 72169353 72169400 -48114912 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 1 1135 29 0 0 0 chr13 72169769 72169798 -48114514 + AT_rich Low_complexity Low_complexity 1 29 0 1 1135 3712 83 24 0 chr13 72169802 72170297 -48114015 - L1_Mus1 LINE L1 -2 6565 6059 1 1135 632 59 19 10 chr13 72170297 72170400 -48113912 + L1Md_F3 LINE L1 6479 6582 -2 1 1135 585 95 24 0 chr13 72170401 72170485 -48113827 + L1_Mm LINE L1 4849 4934 -949 1 1135 619 60 0 0 chr13 72170487 72170570 -48113742 + L1_Mus2 LINE L1 6484 6566 0 1 1135 2276 95 35 0 chr13 72171046 72171362 -48112950 - ORR1A2 LTR MaLR 0 327 1 1 1135 1175 212 111 62 chr13 72171583 72171935 -48112377 - ORR1D2 LTR MaLR 0 370 2 1 1135 201 175 0 0 chr13 72172128 72172168 -48112144 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1135 593 151 46 0 chr13 72172171 72172323 -48111989 + (TA)n Simple_repeat Simple_repeat 1 159 0 2 1135 2660 33 8 2 chr13 72172909 72173236 -48111076 + L1Md_F2 LINE L1 5713 6023 -559 2 1135 5677 159 24 31 chr13 72173232 72174341 -48109971 + L1Md_T LINE L1 104 1205 -5411 2 1135 36956 32 3 0 chr13 72174347 72178752 -48105560 + L1Md_T LINE L1 1170 5586 -297 2 1135 8110 58 0 0 chr13 72178752 72179747 -48104565 + L1Md_T LINE L1 5587 6581 -1 2 1135 4701 57 0 5 chr13 72179761 72180341 -48103971 + L1Md_F2 LINE L1 6005 6581 -1 2 1135 236 28 56 0 chr13 72181938 72181974 -48102338 + (TTTTTG)n Simple_repeat Simple_repeat 1 38 0 2 1135 594 279 81 55 chr13 72181994 72182267 -48102045 - Lx8 LINE L1 -10 7463 7184 2 1135 506 203 8 0 chr13 72183520 72183643 -48100669 + GA-rich Low_complexity Low_complexity 1 124 0 2 1135 195 42 0 0 chr13 72184160 72184184 -48100128 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 2 1135 180 0 0 0 chr13 72184353 72184373 -48099939 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1135 640 299 119 15 chr13 72184396 72184807 -48099505 - L1MC3 LINE L1 -8 7777 7324 2 1135 511 297 139 12 chr13 72184814 72185066 -48099246 + B4A SINE B4 1 284 -8 2 1135 418 236 137 27 chr13 72185173 72185356 -48098956 - ORR1D1 LTR MaLR -1 373 171 2 1135 34410 72 3 7 chr13 72185375 72190546 -48093766 + L1Md_F3 LINE L1 441 5586 -297 2 1135 7869 44 11 4 chr13 72190546 72191523 -48092789 + L1Md_F3 LINE L1 5587 6570 -14 2 1135 21 36 0 0 chr13 72191903 72191931 -48092381 + AT_rich Low_complexity Low_complexity 1 28 0 2 1135 497 94 12 0 chr13 72192754 72192839 -48091473 + (TCC)n Simple_repeat Simple_repeat 3 88 0 2 1135 291 375 65 13 chr13 72192887 72193119 -48091193 + L1MEf LINE L1 581 824 -5418 2 1135 290 297 173 10 chr13 72193840 72194037 -48090275 + L1MEf LINE L1 1737 1965 -4277 2 1135 238 330 10 0 chr13 72194058 72194158 -48090154 + (TA)n Simple_repeat Simple_repeat 1 101 0 2 1135 289 220 70 0 chr13 72194203 72194303 -48090009 + L1MEf LINE L1 2014 2120 -4122 2 1135 625 329 34 13 chr13 72194319 72194553 -48089759 + Lx8 LINE L1 7080 7318 -155 2 1135 1708 258 72 20 chr13 72194863 72195406 -48088906 + Lx8 LINE L1 6897 7467 -6 2 1135 246 259 118 18 chr13 72196128 72196238 -48088074 + L1MEf LINE L1 2795 2915 -3231 2 1135 279 210 4 68 chr13 72196458 72196564 -48087748 + L1MEf LINE L1 3200 3301 -2845 2 1135 339 25 0 0 chr13 72197869 72197909 -48086403 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 1135 836 189 67 0 chr13 72198204 72198368 -48085944 - B3 SINE B2 -36 180 6 2 1135 610 275 94 17 chr13 72198552 72198733 -48085579 + B4A SINE B4 3 197 -95 2 1135 432 51 0 0 chr13 72199496 72199555 -48084757 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1135 247 400 45 0 chr13 72202672 72202782 -48081530 - ID_B1 SINE B4 -10 214 100 2 1135 441 288 142 34 chr13 72202836 72203281 -48081031 - L1M5 LINE L1 -3202 2944 2452 2 1135 2943 172 46 7 chr13 72203818 72204363 -48079949 - MYSERV6-int LTR ERVK -215 8744 8179 2 1135 1632 253 82 55 chr13 72204356 72204916 -48079396 - MYSERV-int LTR ERVK -2184 4366 3792 2 1135 852 260 35 38 chr13 72205364 72205708 -48078604 - RLTR15 LTR ERVK -16 343 1 2 1135 1182 70 0 0 chr13 72205785 72205927 -48078385 + B1_Mus2 SINE Alu 1 142 -5 2 1135 232 48 48 0 chr13 72205941 72205983 -48078329 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2 1135 267 344 60 49 chr13 72206008 72206274 -48078038 - L1M4 LINE L1 -1794 4352 4084 2 1135 241 312 69 42 chr13 72206368 72206585 -48077727 - L1M4 LINE L1 -2801 3345 3123 2 1135 391 247 6 11 chr13 72206828 72207008 -48077304 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1135 674 202 6 0 chr13 72207022 72207200 -48077112 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1135 3351 100 52 0 chr13 72207717 72208199 -48076113 - Lx3_Mus LINE L1 0 7009 6503 2 1135 605 270 14 88 chr13 72208208 72208423 -48075889 - MTD-int LTR MaLR -1059 199 1 2 1135 1009 307 59 23 chr13 72208423 72208810 -48075502 - MTD LTR MaLR 0 419 19 2 1135 548 208 54 67 chr13 72210361 72210593 -48073719 + B3A SINE B2 2 215 -1 2 1135 774 251 129 5 chr13 72211607 72211831 -48072481 + MTEb LTR MaLR 32 283 -96 2 1135 878 296 105 19 chr13 72211812 72212184 -48072128 - MTD LTR MaLR -15 404 1 2 1135 469 331 16 73 chr13 72212910 72213102 -48071210 + B4A SINE B4 102 282 -10 2 1135 671 65 0 11 chr13 72218246 72218340 -48065972 + (TCTCCC)n Simple_repeat Simple_repeat 5 97 0 2 1135 324 0 0 0 chr13 72218345 72218381 -48065931 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1135 489 34 0 0 chr13 72218381 72218439 -48065873 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 1135 227 337 16 131 chr13 72219928 72220119 -48064193 - MamSINE1 SINE tRNA -104 186 18 2 1136 401 345 86 0 chr13 72220814 72220953 -48063359 - B4 SINE B4 -2 290 140 2 1136 286 240 30 40 chr13 72221688 72221788 -48062524 - MTEb LTR MaLR -32 347 249 2 1136 1080 124 12 0 chr13 72221797 72221966 -48062346 + ORR1B1 LTR MaLR 224 394 0 2 1136 3346 48 2 0 chr13 72222850 72223244 -48061068 - MTA_Mm LTR MaLR -1 395 1 2 1136 432 213 0 0 chr13 72223489 72223611 -48060701 + (CAT)n Simple_repeat Simple_repeat 3 124 0 2 1136 794 293 40 9 chr13 72224061 72224284 -48060028 + B4A SINE B4 1 230 -62 2 1136 612 344 17 0 chr13 72224284 72224464 -48059848 + B3A SINE B2 2 184 -14 2 1136 258 32 0 0 chr13 72224468 72224499 -48059813 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1136 2065 277 128 30 chr13 72224526 72225369 -48058943 + Lx8 LINE L1 6369 7294 -179 2 1136 306 0 0 0 chr13 72225511 72225545 -48058767 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1136 414 0 0 0 chr13 72225905 72225951 -48058361 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1136 637 317 82 65 chr13 72228718 72229180 -48055132 + MLT1D LTR MaLR 26 495 -10 2 1136 234 62 0 0 chr13 72229552 72229584 -48054728 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 1136 246 62 0 0 chr13 72229584 72229616 -48054696 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1136 312 274 149 9 chr13 72233310 72233424 -48050888 + RSINE1 SINE B4 35 164 -1 2 1136 536 200 17 6 chr13 72233427 72233603 -48050709 + (CA)n Simple_repeat Simple_repeat 1 178 0 2 1136 242 268 12 24 chr13 72233569 72233737 -48050575 + (CATATA)n Simple_repeat Simple_repeat 1 166 0 2 1136 741 162 11 6 chr13 72233738 72233912 -48050400 + (CA)n Simple_repeat Simple_repeat 1 175 0 2 1136 183 100 0 0 chr13 72234324 72234354 -48049958 + (G)n Simple_repeat Simple_repeat 1 30 0 2 1136 239 312 75 38 chr13 72238367 72238447 -48045865 + MER81 DNA AcHobo 12 94 -20 2 1136 344 306 103 24 chr13 72240131 72240610 -48043702 - L1M3 LINE L1 -537 5643 5126 2 1136 1348 91 0 0 chr13 72240622 72240798 -48043514 - B2_Mm2 SINE B2 -18 177 2 2 1136 581 292 31 0 chr13 72240805 72240966 -48043346 - B3 SINE B2 0 216 51 2 1136 726 318 86 32 chr13 72241035 72241689 -48042623 - L1M3 LINE L1 -1015 5125 4437 2 1136 378 0 0 0 chr13 72241772 72241814 -48042498 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 2 1136 800 185 0 0 chr13 72241819 72241949 -48042363 - B1_Mm SINE Alu -17 130 1 2 1136 227 236 40 53 chr13 72241974 72242050 -48042262 - B4A SINE B4 0 292 218 2 1136 463 70 14 14 chr13 72242057 72242130 -48042182 + (TTA)n Simple_repeat Simple_repeat 2 74 0 2 1136 426 250 15 77 chr13 72242130 72242260 -48042052 - RSINE1 SINE B4 0 165 44 2 1136 365 285 0 56 chr13 72242284 72242416 -48041896 - B4A SINE B4 -48 244 123 2 1136 2797 86 24 46 chr13 72243479 72243893 -48040419 - MTB_Mm LTR MaLR 0 407 3 2 1136 978 256 63 21 chr13 72244828 72245115 -48039197 - RCHARR1 DNA MER1_type -88 886 588 2 1136 1262 210 122 141 chr13 72245119 72245545 -48038767 + MTD LTR MaLR 1 418 -1 2 1136 500 248 45 19 chr13 72245546 72245702 -48038610 - RCHARR1 DNA MER1_type -387 587 428 2 1136 297 0 0 0 chr13 72245883 72245916 -48038396 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 2 1136 1345 70 108 25 chr13 72247665 72247741 -48036571 - L1_Mus3 LINE L1 -7 6631 6556 2 1136 189 0 0 0 chr13 72247741 72247762 -48036550 + (CCCCCT)n Simple_repeat Simple_repeat 3 23 0 2 1136 1345 70 108 25 chr13 72247762 72247889 -48036423 - L1_Mus3 LINE L1 -83 6555 6411 2 1136 460 284 103 63 chr13 72247993 72248245 -48036067 - L1M5 LINE L1 -768 5378 5117 2 1136 273 29 0 0 chr13 72248254 72248288 -48036024 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1136 351 0 0 0 chr13 72248425 72248464 -48035848 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 2 1136 296 361 19 0 chr13 72248842 72248950 -48035362 + PB1D9 SINE Alu 3 112 -8 2 1136 352 240 108 72 chr13 72249229 72249368 -48034944 + MLT1B LTR MaLR 1 144 -246 2 1136 234 321 0 0 chr13 72249543 72249599 -48034713 + MTEa LTR MaLR 8 63 -316 2 1136 1937 78 66 7 chr13 72249680 72249953 -48034359 - ORR1A2 LTR MaLR 0 327 39 2 1136 450 0 0 0 chr13 72249973 72250023 -48034289 + (GA)n Simple_repeat Simple_repeat 1 50 0 2 1136 537 306 19 31 chr13 72250028 72250190 -48034122 - B4 SINE B4 -12 280 121 2 1136 365 167 0 53 chr13 72250941 72251017 -48033295 + HAL1-3A_ME LINE L1 1976 2047 -811 2 1136 246 363 31 31 chr13 72251930 72252058 -48032254 + RMER15 LTR ERVL 294 421 -154 2 1136 315 0 0 0 chr13 72253951 72253986 -48030326 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1136 252 328 0 0 chr13 72254653 72254720 -48029592 - MIR SINE MIR -82 180 114 2 1136 283 309 126 9 chr13 72255611 72255722 -48028590 + PB1 SINE Alu 2 125 -2 2 1136 924 220 52 19 chr13 72256212 72256425 -48027887 + URR1B DNA MER1_type 6 225 0 2 1136 445 320 103 11 chr13 72257291 72257465 -48026847 + B3A SINE B2 9 198 0 2 1136 369 0 0 0 chr13 72257920 72257961 -48026351 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1136 192 40 0 0 chr13 72257961 72257986 -48026326 + (TCC)n Simple_repeat Simple_repeat 3 27 0 2 1136 459 326 6 17 chr13 72261024 72261251 -48023061 + (TATG)n Simple_repeat Simple_repeat 1 224 0 2 1136 334 114 29 0 chr13 72261763 72261833 -48022479 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1136 5801 183 73 11 chr13 72262325 72263465 -48020847 + Lx5 LINE L1 5825 7034 -16 2 1136 567 0 0 0 chr13 72263468 72263531 -48020781 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 2 1136 887 281 52 16 chr13 72263882 72264132 -48020180 - B4 SINE B4 -24 268 10 2 1136 673 236 0 46 chr13 72264174 72264325 -48019987 + B1_Mur1 SINE Alu 6 149 0 3 1136 441 270 31 31 chr13 72264464 72264594 -48019718 + RSINE1 SINE B4 11 140 -25 3 1136 396 0 0 0 chr13 72264594 72264638 -48019674 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1136 346 273 71 0 chr13 72265939 72266038 -48018274 - PB1D9 SINE Alu -8 112 7 3 1136 540 0 0 0 chr13 72266678 72266738 -48017574 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 3 1136 852 128 0 32 chr13 72267385 72267571 -48016741 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1136 683 71 0 10 chr13 72267693 72267792 -48016520 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 3 1136 550 308 36 61 chr13 72268838 72269118 -48015194 + B4A SINE B4 2 274 -18 3 1136 369 0 0 0 chr13 72269137 72269178 -48015134 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1136 395 296 16 125 chr13 72269385 72269562 -48014750 - B3A SINE B2 0 195 29 3 1136 2866 92 40 10 chr13 72269737 72270132 -48014180 + MTB_Mm LTR MaLR 1 407 0 3 1136 444 342 86 43 chr13 72274492 72274865 -48009447 + MLT1C LTR MaLR 18 406 -61 3 1136 495 0 0 0 chr13 72274993 72275048 -48009264 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 1136 438 305 20 10 chr13 72275197 72275399 -48008913 + L1MD LINE L1 3695 3898 -2248 3 1136 313 304 98 87 chr13 72275422 72275688 -48008624 + B4 SINE B4 5 273 -19 3 1136 339 196 9 29 chr13 72276179 72276284 -48008028 + GA-rich Low_complexity Low_complexity 2 104 0 3 1136 311 225 145 66 chr13 72276284 72276436 -48007876 + HAL1-3A_ME LINE L1 2284 2447 -411 3 1136 198 0 0 0 chr13 72279753 72279775 -48004537 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1136 258 32 0 0 chr13 72281374 72281405 -48002907 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1136 360 181 27 14 chr13 72281405 72281478 -48002834 - B4A SINE B4 -68 224 151 3 1136 483 18 0 0 chr13 72281480 72281536 -48002776 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1136 423 0 0 0 chr13 72282480 72282527 -48001785 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1136 362 305 103 92 chr13 72285227 72285498 -47998814 + B4 SINE B4 1 274 -18 3 1136 934 35 39 39 chr13 72285598 72285778 -47998534 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 3 1136 399 125 0 0 chr13 72285778 72285850 -47998462 + (CAGA)n Simple_repeat Simple_repeat 1 72 0 3 1136 298 325 8 16 chr13 72286601 72286729 -47997583 + GA-rich Low_complexity Low_complexity 3 129 0 3 1136 844 288 69 69 chr13 72287584 72287961 -47996351 - MTEa LTR MaLR 0 379 3 3 1136 511 256 15 52 chr13 72290425 72290561 -47993751 + ID_B1 SINE B4 89 219 -5 3 1136 399 56 0 0 chr13 72290802 72290856 -47993456 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1136 303 320 30 30 chr13 72291198 72291298 -47993014 - Lx8 LINE L1 -195 7278 7179 3 1136 417 333 71 39 chr13 72293351 72293660 -47990652 - MLT2B4 LTR ERVL -233 323 5 3 1136 2227 145 18 16 chr13 72293844 72294229 -47990083 - ORR1B1 LTR MaLR -8 386 1 3 1136 368 191 11 0 chr13 72294489 72294583 -47989729 + GA-rich Low_complexity Low_complexity 2 96 0 3 1136 410 283 87 35 chr13 72294611 72294783 -47989529 + MTEa LTR MaLR 190 370 -9 3 1136 330 336 109 0 chr13 72295382 72295510 -47988802 + B1F1 SINE Alu 6 147 -2 3 1136 2435 150 5 29 chr13 72295819 72296231 -47988081 + Lx2B LINE L1 6597 6998 -2 3 1136 741 155 0 0 chr13 72298271 72298400 -47985912 + (CA)n Simple_repeat Simple_repeat 1 129 0 3 1136 233 261 72 0 chr13 72302488 72302557 -47981755 + ORR1E LTR MaLR 240 313 -46 3 1136 896 198 119 0 chr13 72304536 72304738 -47979574 - URR1A DNA MER1_type 0 226 1 3 1136 4604 70 25 28 chr13 72305834 72305896 -47978416 + L1_Mus2 LINE L1 5243 5304 -579 3 1136 1015 109 0 7 chr13 72305896 72306043 -47978269 + B1_Mus2 SINE Alu 2 147 0 3 1136 4604 63 29 11 chr13 72306043 72306813 -47977499 + L1_Mus2 LINE L1 5305 6073 -493 3 1136 337 233 35 11 chr13 72307260 72307347 -47976965 - Lx8 LINE L1 -808 6665 6577 3 1136 461 167 0 10 chr13 72308768 72308871 -47975441 + (TA)n Simple_repeat Simple_repeat 2 103 0 3 1136 189 0 0 0 chr13 72309267 72309288 -47975024 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 3 1136 270 0 0 0 chr13 72309759 72309789 -47974523 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1136 27 0 0 0 chr13 72311238 72311265 -47973047 + AT_rich Low_complexity Low_complexity 1 27 0 3 1136 1022 24 8 0 chr13 72311331 72311456 -47972856 + (TTC)n Simple_repeat Simple_repeat 3 128 0 3 1136 1077 74 0 7 chr13 72311456 72311592 -47972720 - B1_Mus2 SINE Alu -12 135 1 3 1136 296 215 64 11 chr13 72312042 72312136 -47972176 - Lx7 LINE L1 -34 5813 5715 3 1136 511 201 22 28 chr13 72312157 72312336 -47971976 + (TATG)n Simple_repeat Simple_repeat 1 178 0 3 1136 222 193 23 46 chr13 72312362 72312449 -47971863 + (TATG)n Simple_repeat Simple_repeat 2 86 0 3 1136 1253 291 114 40 chr13 72312468 72313430 -47970882 - Lx7 LINE L1 -1956 5740 4692 3 1136 429 170 0 57 chr13 72313442 72313575 -47970737 - L1Md_F2 LINE L1 0 6582 6481 3 1136 1669 45 0 0 chr13 72313576 72313775 -47970537 + L1_Mus1 LINE L1 6262 6460 -107 3 1136 4287 97 21 23 chr13 72313864 72314518 -47969794 - L1_Mus3 LINE L1 -2 6636 5984 3 1136 422 294 44 10 chr13 72314532 72314738 -47969574 - L1MEf LINE L1 -1457 4683 4471 3 1136 34 24 0 0 chr13 72314744 72314785 -47969527 + AT_rich Low_complexity Low_complexity 1 41 0 3 1136 879 311 86 48 chr13 72314987 72315094 -47969218 - L1MEf LINE L1 -2903 3240 3141 3 1136 342 0 0 0 chr13 72315094 72315132 -47969180 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 3 1136 879 311 86 48 chr13 72315132 72315661 -47968651 - L1MEf LINE L1 -3003 3140 2587 3 1136 1998 150 91 3 chr13 72315661 72316023 -47968289 - ORR1B1 LTR MaLR 0 394 1 3 1136 879 309 72 91 chr13 72316023 72316669 -47967643 - L1MEf LINE L1 -3557 2586 1965 3 1136 3282 43 0 2 chr13 72316669 72317066 -47967246 + L1Md_F3 LINE L1 6189 6584 0 3 1136 338 309 72 91 chr13 72317066 72317329 -47966983 - L1MEf LINE L1 -4656 1586 1333 3 1136 2046 100 29 3 chr13 72317728 72318039 -47966273 + ORR1A2 LTR MaLR 1 319 -8 3 1136 337 249 40 27 chr13 72318129 72318285 -47966027 - L1_Mm LINE L1 -4182 1698 1536 3 1136 226 229 24 24 chr13 72318492 72318577 -47965735 - L1M3f LINE L1 -4222 1106 1022 3 1136 242 292 65 24 chr13 72319960 72320083 -47964229 - MLT1A0 LTR MaLR -157 208 81 3 1136 454 206 0 11 chr13 72320280 72320373 -47963939 - PB1 SINE Alu -2 125 34 3 1136 455 132 0 11 chr13 72327115 72327207 -47957105 + (GA)n Simple_repeat Simple_repeat 2 92 0 3 1136 315 0 0 0 chr13 72327339 72327374 -47956938 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1136 23 0 0 0 chr13 72327614 72327637 -47956675 + AT_rich Low_complexity Low_complexity 1 23 0 3 1136 1967 168 160 87 chr13 72328787 72329616 -47954696 + RMER19B LTR ERVK 1 890 -12 3 1136 224 228 0 48 chr13 72330358 72330441 -47953871 + (TATATG)n Simple_repeat Simple_repeat 6 84 0 3 1136 339 262 19 9 chr13 72330475 72330583 -47953729 + (TATG)n Simple_repeat Simple_repeat 2 110 0 3 1136 614 331 81 26 chr13 72330585 72330858 -47953454 - B4 SINE B4 -1 291 4 3 1136 433 306 78 24 chr13 72330895 72331175 -47953137 + L1MC2 LINE L1 5731 6022 -1763 3 1136 341 323 109 48 chr13 72331324 72331784 -47952528 + MLT2B3 LTR ERVL 235 694 -23 3 1136 1137 268 103 9 chr13 72331785 72332116 -47952196 - ORR1D2 LTR MaLR -3 367 6 3 1136 846 105 35 0 chr13 72332120 72332292 -47952020 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 3 1136 341 58 0 19 chr13 72332299 72332352 -47951960 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 1136 182 173 53 0 chr13 72332368 72332443 -47951869 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 3 1136 394 201 44 31 chr13 72332471 72332630 -47951682 + (TCTA)n Simple_repeat Simple_repeat 2 162 0 3 1136 330 244 40 23 chr13 72332673 72332849 -47951463 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 3 1136 273 57 0 0 chr13 72334697 72334732 -47949580 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 1136 182 80 80 0 chr13 72334790 72334840 -47949472 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 3 1136 185 132 26 0 chr13 72334845 72334883 -47949429 + (TA)n Simple_repeat Simple_repeat 2 40 0 3 1136 412 132 72 0 chr13 72334925 72335077 -47949235 + (TCTA)n Simple_repeat Simple_repeat 1 163 0 3 1136 1638 174 121 14 chr13 72337427 72337783 -47946529 + ORR1B1 LTR MaLR 1 394 0 3 1136 309 353 105 28 chr13 72337916 72338164 -47946148 - MER74A LTR ERVL -116 442 176 3 1136 257 229 163 41 chr13 72339340 72339462 -47944850 + MLT1C LTR MaLR 1 137 -253 3 1136 613 175 114 36 chr13 72339462 72339628 -47944684 - MTD LTR MaLR 0 419 241 3 1136 613 252 34 0 chr13 72339658 72339805 -47944507 - MTD LTR MaLR -267 152 1 3 1136 286 242 89 59 chr13 72339807 72339908 -47944404 + MLT1C LTR MaLR 142 245 -222 3 1136 16084 19 0 0 chr13 72341756 72343579 -47940733 + L1Md_T LINE L1 3764 5586 -297 3 1136 8651 31 0 0 chr13 72343579 72344575 -47939737 + L1Md_T LINE L1 5587 6582 0 3 1136 22 0 0 0 chr13 72345534 72345556 -47938756 + AT_rich Low_complexity Low_complexity 1 22 0 3 1136 258 245 129 88 chr13 72346143 72346313 -47937999 + RMER15 LTR ERVL 49 225 -350 3 1136 379 306 43 11 chr13 72346308 72346496 -47937816 + RMER15 LTR ERVL 381 574 -1 3 1136 27 0 0 0 chr13 72348875 72348902 -47935410 + AT_rich Low_complexity Low_complexity 1 27 0 3 1136 342 0 0 0 chr13 72351536 72351574 -47932738 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1136 204 392 15 0 chr13 72351588 72351718 -47932594 + (TG)n Simple_repeat Simple_repeat 2 133 0 3 1137 367 209 38 21 chr13 72356349 72356449 -47927863 + MTE2b LTR MaLR 245 365 -14 3 1137 381 252 45 112 chr13 72357348 72357482 -47926830 + ORR1D2 LTR MaLR 6 130 -240 3 1137 545 244 76 15 chr13 72357630 72357801 -47926511 + ORR1D2 LTR MaLR 168 355 -15 3 1137 3001 285 51 55 chr13 72357809 72359184 -47925128 + ORR1D2-int LTR MaLR 1 1370 0 3 1137 757 284 43 113 chr13 72359184 72359581 -47924731 + ORR1D2 LTR MaLR 1 369 -1 3 1137 206 259 17 17 chr13 72360800 72360859 -47923453 + MIRm SINE MIR 207 265 -11 3 1137 2849 78 59 8 chr13 72361007 72361394 -47922918 + MTB_Mm LTR MaLR 1 407 0 3 1137 392 272 9 9 chr13 72361491 72361606 -47922706 + RCHARR1 DNA MER1_type 857 971 -3 3 1137 366 74 0 0 chr13 72361757 72361811 -47922501 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1137 265 362 0 0 chr13 72363487 72363603 -47920709 + CT-rich Low_complexity Low_complexity 1 116 0 3 1137 192 303 0 0 chr13 72363615 72363793 -47920519 + CT-rich Low_complexity Low_complexity 3 180 0 3 1137 312 27 0 0 chr13 72363849 72363886 -47920426 + (TC)n Simple_repeat Simple_repeat 1 37 0 3 1137 336 299 35 56 chr13 72364141 72364283 -47920029 - L1M2 LINE L1 -2469 3674 3536 3 1137 477 0 0 0 chr13 72365798 72365851 -47918461 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1137 244 319 189 13 chr13 72365868 72366027 -47918285 + B4A SINE B4 105 291 -1 3 1137 367 106 15 15 chr13 72366061 72366128 -47918184 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1137 184 218 25 37 chr13 72366150 72366312 -47918000 + (CATA)n Simple_repeat Simple_repeat 2 161 0 4 1137 450 282 11 33 chr13 72366424 72366607 -47917705 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1137 564 15 0 0 chr13 72367080 72367145 -47917167 + (TTTC)n Simple_repeat Simple_repeat 2 66 0 4 1137 1685 62 0 0 chr13 72371444 72371655 -47912657 + L1_Mus1 LINE L1 6355 6565 -2 4 1137 216 312 13 0 chr13 72371698 72371775 -47912537 + MER5B DNA MER1_type 57 134 -44 4 1137 305 137 20 0 chr13 72371856 72371907 -47912405 + MTD LTR MaLR 1 52 -315 4 1137 536 53 0 13 chr13 72374338 72374415 -47909897 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1137 1609 236 31 8 chr13 72375012 72375393 -47908919 + MTD LTR MaLR 18 407 -12 4 1137 347 337 106 21 chr13 72375468 72375656 -47908656 - B4A SINE B4 -1 291 88 4 1137 226 95 24 0 chr13 72376350 72376392 -47907920 - MLT1A1 LTR MaLR -21 387 345 4 1137 248 288 54 9 chr13 72378942 72379054 -47905258 + L1MA6 LINE L1 6139 6255 -45 4 1137 21 36 0 0 chr13 72379084 72379112 -47905200 + AT_rich Low_complexity Low_complexity 1 28 0 4 1137 491 307 90 29 chr13 72381272 72381517 -47902795 - B4A SINE B4 -18 274 15 4 1137 1077 225 104 0 chr13 72381830 72382079 -47902233 - MTD LTR MaLR -143 276 2 4 1137 347 261 16 25 chr13 72382079 72382538 -47901774 + (TATG)n Simple_repeat Simple_repeat 1 454 0 4 1137 515 214 25 34 chr13 72382480 72382919 -47901393 + (TATG)n Simple_repeat Simple_repeat 1 435 0 4 1137 631 276 12 6 chr13 72384067 72384231 -47900081 + B3A SINE B2 1 165 -33 4 1137 238 283 97 40 chr13 72384629 72384857 -47899455 + L1M5 LINE L1 3099 3339 -2807 4 1137 1348 193 248 9 chr13 72385147 72385486 -47898826 - MTC LTR MaLR -1 420 1 4 1137 243 0 0 0 chr13 72386193 72386220 -47898092 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1137 317 174 217 0 chr13 72386397 72386489 -47897823 - ORR1D2 LTR MaLR -1 369 258 4 1137 889 259 105 25 chr13 72386489 72386774 -47897538 - ORR1D2 LTR MaLR -55 315 8 4 1137 523 311 54 18 chr13 72386913 72387158 -47897154 - L1MA4 LINE L1 -253 5915 5662 4 1137 26 0 0 0 chr13 72387160 72387186 -47897126 + AT_rich Low_complexity Low_complexity 1 26 0 4 1137 566 260 166 106 chr13 72387218 72387567 -47896745 + ORR1D2 LTR MaLR 1 370 0 4 1137 473 135 11 0 chr13 72387619 72387708 -47896604 + (TA)n Simple_repeat Simple_repeat 1 90 0 4 1137 710 268 43 10 chr13 72388002 72388209 -47896103 - B3 SINE B2 0 216 3 4 1137 376 111 0 27 chr13 72389565 72389639 -47894673 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 1137 273 322 16 63 chr13 72390437 72390563 -47893749 - PB1D7 SINE Alu 0 120 1 4 1137 2701 31 0 45 chr13 72390827 72391164 -47893148 + RLTRETN_Mm LTR ERVK 1 322 0 4 1137 1393 51 91 0 chr13 72391174 72391371 -47892941 - LTRIS3 LTR ERV1 -297 215 1 4 1137 1632 206 46 55 chr13 72392257 72392759 -47891553 - Lx8 LINE L1 -819 5058 4736 4 1137 1869 171 65 0 chr13 72392849 72393201 -47891111 + MTC LTR MaLR 3 377 -44 4 1137 365 252 34 25 chr13 72393734 72393852 -47890460 + MTD LTR MaLR 301 419 0 4 1137 342 307 45 0 chr13 72393902 72393990 -47890322 - RMER15-int LTR ERVL -2718 2281 2190 4 1137 2271 212 53 42 chr13 72394628 72395155 -47889157 - MT2A LTR ERVL 0 533 1 4 1137 741 85 0 0 chr13 72395426 72395532 -47888780 + (TCCC)n Simple_repeat Simple_repeat 4 109 0 4 1137 234 0 0 0 chr13 72397494 72397520 -47886792 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1137 579 243 28 21 chr13 72397520 72397652 -47886660 - B1F1 SINE Alu -11 138 6 4 1137 195 218 0 0 chr13 72398877 72398932 -47885380 + (CA)n Simple_repeat Simple_repeat 1 55 0 4 1137 440 303 82 94 chr13 72399780 72400035 -47884277 + B4A SINE B4 1 252 -40 4 1137 383 274 8 61 chr13 72400254 72400386 -47883926 + RSINE1 SINE B4 5 129 -36 4 1137 501 17 0 0 chr13 72400398 72400456 -47883856 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 1137 2524 243 61 79 chr13 72400769 72401721 -47882591 - RMER17B LTR ERVK -22 936 2 4 1137 330 87 0 0 chr13 72405265 72405311 -47879001 + (A)n Simple_repeat Simple_repeat 1 46 0 4 1137 3020 65 28 3 chr13 72406941 72407329 -47876983 + MTB LTR MaLR 2 399 -1 4 1137 1546 337 65 32 chr13 72409156 72410665 -47873647 - L1_Rod LINE L1 -3094 2753 1195 4 1137 232 307 36 30 chr13 72410708 72410876 -47873436 - L1_Rod LINE L1 -6514 1094 926 4 1137 433 337 29 24 chr13 72412396 72412566 -47871746 + RCHARR1 DNA MER1_type 4 174 -800 4 1137 389 369 46 39 chr13 72414855 72415076 -47869236 + B4A SINE B4 3 228 -64 4 1137 453 36 0 0 chr13 72415076 72415131 -47869181 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 4 1137 389 369 46 39 chr13 72415131 72415191 -47869121 + B4A SINE B4 229 286 -6 4 1137 869 284 83 34 chr13 72415207 72415587 -47868725 + MTE2a LTR MaLR 18 419 0 4 1137 432 281 0 0 chr13 72415664 72415842 -47868470 + (CA)n Simple_repeat Simple_repeat 2 179 0 4 1137 390 218 0 0 chr13 72415875 72415985 -47868327 + (CA)n Simple_repeat Simple_repeat 1 110 0 4 1137 447 307 43 0 chr13 72416693 72416773 -47867539 + B4A SINE B4 1 86 -206 4 1137 235 257 29 0 chr13 72416773 72416843 -47867469 + B1_Mus2 SINE Alu 2 73 -74 4 1137 521 178 0 48 chr13 72416916 72417105 -47867207 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1137 564 198 7 13 chr13 72417121 72417435 -47866877 + (CA)n Simple_repeat Simple_repeat 1 312 0 4 1137 354 157 0 0 chr13 72417494 72417577 -47866735 + (CA)n Simple_repeat Simple_repeat 1 83 0 4 1137 376 236 30 89 chr13 72418440 72418575 -47865737 - B1F SINE Alu 0 149 23 4 1137 696 213 0 22 chr13 72418627 72418766 -47865546 - B1_Mur2 SINE Alu -1 148 13 4 1137 233 94 74 19 chr13 72419233 72419256 -47865056 + (GTTTG)n Simple_repeat Simple_repeat 4 28 0 4 1137 369 0 0 0 chr13 72419256 72419297 -47865015 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1137 233 94 74 19 chr13 72419297 72419327 -47864985 + (GTTTG)n Simple_repeat Simple_repeat 2 33 0 4 1137 242 95 0 23 chr13 72422104 72422147 -47862165 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 4 1137 198 0 0 0 chr13 72422209 72422231 -47862081 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 4 1137 242 233 17 0 chr13 72422252 72422312 -47862000 + Lx7 LINE L1 7615 7675 -21 4 1137 1702 224 93 68 chr13 72422682 72423252 -47861060 + RLTR31A_Mm LTR ERVK 1 584 0 4 1137 2157 148 19 11 chr13 72424824 72425199 -47859113 + ORR1C1 LTR MaLR 1 378 0 4 1137 21 0 0 0 chr13 72427522 72427543 -47856769 + AT_rich Low_complexity Low_complexity 1 21 0 4 1137 465 19 0 0 chr13 72429204 72429258 -47855054 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1137 180 0 0 0 chr13 72430320 72430340 -47853972 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1137 327 49 0 0 chr13 72431763 72431804 -47852508 + (A)n Simple_repeat Simple_repeat 1 41 0 4 1137 186 43 0 0 chr13 72437532 72437555 -47846757 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 4 1137 392 105 18 0 chr13 72437556 72437613 -47846699 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 4 1137 855 192 0 0 chr13 72437613 72437790 -47846522 + CT-rich Low_complexity Low_complexity 2 178 0 4 1137 447 19 0 0 chr13 72438491 72438543 -47845769 + (TC)n Simple_repeat Simple_repeat 1 52 0 4 1137 546 54 0 0 chr13 72438543 72438616 -47845696 + (CA)n Simple_repeat Simple_repeat 1 74 0 4 1137 360 0 0 0 chr13 72441371 72441411 -47842901 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 1137 399 304 82 30 chr13 72444801 72445046 -47839266 + MTEa LTR MaLR 97 378 -1 4 1137 252 0 0 0 chr13 72445334 72445362 -47838950 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1137 605 246 37 8 chr13 72445857 72446022 -47838290 + B3A SINE B2 1 158 -58 4 1137 1354 277 25 11 chr13 72447980 72448268 -47836044 + Lx9 LINE L1 7204 7497 -147 4 1137 258 106 0 0 chr13 72448268 72448315 -47835997 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1137 1354 277 25 11 chr13 72448315 72448460 -47835852 + Lx9 LINE L1 7498 7642 -2 4 1137 22 35 0 0 chr13 72449077 72449106 -47835206 + AT_rich Low_complexity Low_complexity 1 29 0 4 1137 1250 60 2 37 chr13 72449154 72449670 -47834642 + (GAA)n Simple_repeat Simple_repeat 1 498 0 4 1137 687 84 0 0 chr13 72449670 72449765 -47834547 + (GGAA)n Simple_repeat Simple_repeat 2 96 0 4 1137 33 0 0 0 chr13 72450057 72450090 -47834222 + AT_rich Low_complexity Low_complexity 1 33 0 4 1137 1863 195 70 19 chr13 72450154 72450567 -47833745 - RMER20B LTR ERVK -193 434 1 4 1137 295 153 99 30 chr13 72450568 72450639 -47833673 - L1_Mur3 LINE L1 -2407 5475 5370 4 1137 606 283 156 16 chr13 72450643 72450700 -47833612 - L1_Mur3 LINE L1 -637 5243 5174 4 1137 606 28 0 0 chr13 72450700 72450772 -47833540 + (TC)n Simple_repeat Simple_repeat 2 73 0 4 1137 606 283 156 16 chr13 72450772 72451087 -47833225 - L1_Mur3 LINE L1 -707 5173 4819 4 1137 2191 278 68 32 chr13 72451127 72451450 -47832862 + Lx8 LINE L1 6629 6947 -526 4 1137 621 0 0 0 chr13 72451450 72451519 -47832793 + (TC)n Simple_repeat Simple_repeat 1 69 0 4 1137 477 0 0 0 chr13 72451519 72451571 -47832741 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1137 2191 278 68 32 chr13 72451571 72452061 -47832251 + Lx8 LINE L1 6948 7471 -2 4 1137 253 273 129 52 chr13 72452094 72452168 -47832144 - Lx8 LINE L1 -1291 6182 6105 4 1137 2469 165 14 5 chr13 72452168 72452583 -47831729 + MTC LTR MaLR 3 421 0 4 1137 253 273 129 52 chr13 72452583 72452624 -47831688 - Lx8 LINE L1 -1369 6104 6058 4 1137 21 0 0 0 chr13 72452685 72452706 -47831606 + AT_rich Low_complexity Low_complexity 1 21 0 4 1137 1355 289 109 18 chr13 72452728 72453388 -47830924 - L1_Mur3 LINE L1 -1106 4774 4055 4 1137 498 261 28 5 chr13 72453391 72453604 -47830708 + Lx8 LINE L1 5702 5959 -1685 4 1137 2843 90 23 3 chr13 72453748 72454139 -47830173 - MTB LTR MaLR 0 400 2 4 1137 369 0 0 0 chr13 72454253 72454294 -47830018 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1137 2344 294 68 41 chr13 72454295 72455194 -47829118 + Lx8 LINE L1 6277 7199 -274 4 1137 26 50 0 0 chr13 72455903 72455943 -47828369 + AT_rich Low_complexity Low_complexity 1 40 0 4 1137 1768 145 90 17 chr13 72455982 72456283 -47828029 - ORR1A3 LTR MaLR 0 326 4 4 1137 29 47 0 0 chr13 72456793 72456836 -47827476 + AT_rich Low_complexity Low_complexity 1 43 0 4 1137 511 299 0 0 chr13 72456890 72457024 -47827288 + RSINE1 SINE B4 1 134 -31 4 1137 307 265 118 0 chr13 72457837 72457939 -47826373 - MLT1A LTR MaLR -260 114 1 4 1137 278 280 122 32 chr13 72458311 72458499 -47825813 + L1MEf LINE L1 2004 2208 -3992 4 1137 812 156 185 16 chr13 72460360 72460549 -47823763 - URR1A DNA MER1_type 0 226 6 5 1137 1051 255 66 66 chr13 72460816 72461181 -47823131 + MTE2a LTR MaLR 1 365 -14 5 1137 261 207 83 0 chr13 72462167 72462288 -47822024 + (TCTA)n Simple_repeat Simple_repeat 2 132 0 5 1137 684 230 0 7 chr13 72462353 72462489 -47821823 - B1_Mur1 SINE Alu -13 136 2 5 1137 255 245 96 0 chr13 72462666 72462760 -47821552 - L1M2 LINE L1 -1159 4984 4882 5 1137 1050 274 34 22 chr13 72463280 72463638 -47820674 + Lx6 LINE L1 7068 7429 -31 5 1137 1250 80 0 6 chr13 72463656 72463833 -47820479 + (GGAGAA)n Simple_repeat Simple_repeat 2 177 0 5 1137 426 50 0 0 chr13 72463833 72463922 -47820390 + (GGAA)n Simple_repeat Simple_repeat 1 89 0 5 1137 219 146 0 0 chr13 72464331 72464372 -47819940 + (C)n Simple_repeat Simple_repeat 1 41 0 5 1137 771 310 184 9 chr13 72464430 72464860 -47819452 - MER21B LTR ERV1 -270 593 89 5 1137 865 269 56 32 chr13 72465336 72465620 -47818692 + B4 SINE B4 2 292 0 5 1137 239 313 89 20 chr13 72466066 72466167 -47818145 - RMER13A LTR ERVK -212 696 589 5 1137 1052 257 83 37 chr13 72466177 72466609 -47817703 - RMER13A LTR ERVK -395 465 14 5 1137 363 209 0 0 chr13 72468484 72468589 -47815723 + CT-rich Low_complexity Low_complexity 2 106 0 5 1137 1828 69 19 0 chr13 72468662 72468922 -47815390 - RMER17D LTR ERVK -624 265 1 5 1137 1187 55 0 14 chr13 72469457 72469604 -47814708 - B1_Mus2 SINE Alu -2 145 1 5 1137 450 218 102 24 chr13 72470312 72470439 -47813873 + B1_Mur4 SINE Alu 11 147 -3 5 1137 250 294 15 0 chr13 72470684 72470752 -47813560 + ORR1E LTR MaLR 271 339 -20 5 1137 465 303 128 11 chr13 72470780 72471054 -47813258 + L1MB3 LINE L1 5742 6047 -136 5 1137 186 143 0 0 chr13 72471196 72471231 -47813081 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1137 416 150 0 9 chr13 72471242 72471356 -47812956 + (TA)n Simple_repeat Simple_repeat 2 114 0 5 1137 2294 145 39 11 chr13 72471484 72471918 -47812394 + RLTR13D3 LTR ERVK 669 1114 0 5 1137 552 277 61 17 chr13 72472092 72472272 -47812040 + B3A SINE B2 11 198 0 5 1137 636 358 39 10 chr13 72474689 72475082 -47809230 - Lx9 LINE L1 -1 7472 7060 5 1137 252 0 0 0 chr13 72476170 72476198 -47808114 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1137 225 0 0 0 chr13 72476200 72476225 -47808087 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1137 903 130 14 7 chr13 72476659 72476806 -47807506 + B1_Mus1 SINE Alu 1 148 0 5 1137 660 102 0 0 chr13 72476816 72476914 -47807398 + (GAAA)n Simple_repeat Simple_repeat 3 100 0 5 1137 1016 199 118 15 chr13 72476914 72477185 -47807127 - Lx9 LINE L1 -13 7631 7333 5 1137 39 22 0 0 chr13 72478460 72478506 -47805806 + AT_rich Low_complexity Low_complexity 1 46 0 5 1137 468 0 0 0 chr13 72479688 72479740 -47804572 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1137 270 0 0 0 chr13 72479740 72479769 -47804543 + (CA)n Simple_repeat Simple_repeat 1 30 0 5 1137 330 26 0 0 chr13 72479814 72479853 -47804459 + (CATA)n Simple_repeat Simple_repeat 2 40 0 5 1137 495 27 41 0 chr13 72479864 72479937 -47804375 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 5 1137 675 212 73 77 chr13 72479950 72480170 -47804142 - MTD LTR MaLR -2 417 199 5 1137 1725 222 129 27 chr13 72480172 72480308 -47804004 - Lx9 LINE L1 -3 7641 7503 5 1137 315 0 0 0 chr13 72480308 72480343 -47803969 + (TGG)n Simple_repeat Simple_repeat 1 35 0 5 1137 1725 222 129 27 chr13 72480343 72480757 -47803555 - Lx9 LINE L1 -142 7502 7036 5 1137 865 231 53 129 chr13 72480757 72481075 -47803237 - Lx9 LINE L1 -1017 6627 6334 5 1137 942 202 14 38 chr13 72481076 72481287 -47803025 - MTD LTR MaLR -212 207 2 5 1137 819 184 206 6 chr13 72481390 72481570 -47802742 + B3 SINE B2 1 216 0 5 1137 480 287 81 38 chr13 72481659 72481869 -47802443 + ID_B1 SINE B4 1 219 -5 5 1137 2536 117 51 38 chr13 72482207 72482660 -47801652 - MT2C_Mm LTR ERVL 0 475 17 5 1138 21 0 0 0 chr13 72483244 72483265 -47801047 + AT_rich Low_complexity Low_complexity 1 21 0 5 1138 457 264 105 35 chr13 72483447 72483647 -47800665 + MamRep434 DNA TcMar 120 333 -93 5 1138 198 0 0 0 chr13 72483869 72483891 -47800421 + (CG)n Simple_repeat Simple_repeat 2 23 0 5 1138 240 35 0 0 chr13 72485090 72485119 -47799193 + (TTA)n Simple_repeat Simple_repeat 2 30 0 5 1138 819 152 6 70 chr13 72485952 72486108 -47798204 - B1_Mur4 SINE Alu 0 150 5 5 1138 315 293 24 16 chr13 72486230 72486355 -47797957 + (CA)n Simple_repeat Simple_repeat 1 126 0 5 1138 344 119 47 23 chr13 72487118 72487204 -47797108 + GA-rich Low_complexity Low_complexity 3 90 0 5 1138 207 0 0 0 chr13 72488567 72488590 -47795722 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1138 1246 13 0 13 chr13 72488845 72488999 -47795313 + (GGGAGA)n Simple_repeat Simple_repeat 5 156 0 5 1138 365 278 0 6 chr13 72489556 72489719 -47794593 + (CA)n Simple_repeat Simple_repeat 2 163 0 5 1138 270 0 0 0 chr13 72490688 72490718 -47793594 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1138 387 0 0 0 chr13 72491459 72491502 -47792810 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1138 227 155 32 65 chr13 72491635 72491697 -47792615 + L1M3 LINE L1 5150 5209 -931 5 1138 542 281 157 3 chr13 72491787 72492080 -47792232 + L1MA4 LINE L1 5173 5510 -370 5 1138 798 251 129 9 chr13 72492731 72492964 -47791348 - MTE2b LTR MaLR -113 266 6 5 1138 911 311 26 58 chr13 72493251 72493630 -47790682 - MTE2a LTR MaLR -1 378 12 5 1138 444 216 14 66 chr13 72493686 72493744 -47790568 + L1MA4 LINE L1 5703 5789 -511 5 1138 1643 142 40 78 chr13 72493744 72494170 -47790142 + RMER17C LTR ERVK 1 410 0 5 1138 444 226 74 62 chr13 72494170 72494275 -47790037 + L1MA4 LINE L1 5722 5889 -1584 5 1138 216 0 0 0 chr13 72494674 72494698 -47789614 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 5 1138 224 59 29 0 chr13 72494701 72494735 -47789577 + (GGA)n Simple_repeat Simple_repeat 2 36 0 5 1138 186 43 0 0 chr13 72494818 72494841 -47789471 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 5 1138 606 240 117 0 chr13 72494841 72495012 -47789300 + B3 SINE B2 16 206 -10 5 1138 207 0 0 0 chr13 72495998 72496021 -47788291 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1138 374 311 9 0 chr13 72496845 72496951 -47787361 - PB1D10 SINE Alu 0 117 11 5 1138 249 330 48 39 chr13 72496889 72496993 -47787319 - ID_B1 SINE B4 -71 153 49 5 1138 228 245 0 0 chr13 72497159 72497212 -47787100 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 5 1138 494 342 89 31 chr13 72497257 72497707 -47786605 - Lx8 LINE L1 -83 7390 6915 5 1138 28 61 0 0 chr13 72498135 72498184 -47786128 + AT_rich Low_complexity Low_complexity 1 49 0 5 1138 424 296 88 62 chr13 72499625 72499899 -47784413 - MT2A LTR ERVL -251 282 2 5 1138 231 264 28 0 chr13 72500749 72500821 -47783491 + G-rich Low_complexity Low_complexity 1 74 0 1 1138 28 0 0 0 chr13 72501778 72501806 -47782506 + AT_rich Low_complexity Low_complexity 1 28 0 2 1138 847 102 0 14 chr13 72502183 72502322 -47781990 + (TTTC)n Simple_repeat Simple_repeat 2 138 0 3 1138 306 328 6 34 chr13 72504375 72504552 -47779760 + CT-rich Low_complexity Low_complexity 2 173 0 4 1138 741 190 5 5 chr13 72504569 72504796 -47779516 + CT-rich Low_complexity Low_complexity 1 227 0 4 1138 249 325 0 41 chr13 72504838 72504960 -47779352 - PB1D10 SINE Alu 0 117 1 5 1138 1161 288 68 0 chr13 72509907 72510244 -47774068 - MTEa LTR MaLR -3 376 17 6 1138 282 348 104 55 chr13 72510684 72510848 -47773464 - MLT1I LTR MaLR -169 242 71 7 1138 217 123 51 34 chr13 72511143 72511202 -47773110 + (TA)n Simple_repeat Simple_repeat 2 61 0 8 1138 279 0 0 0 chr13 72511225 72511256 -47773056 + (TG)n Simple_repeat Simple_repeat 2 32 0 9 1138 645 66 0 0 chr13 72511281 72511372 -47772940 + (TA)n Simple_repeat Simple_repeat 2 92 0 1 1138 202 282 0 0 chr13 72511392 72511463 -47772849 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 1138 207 69 0 0 chr13 72511508 72511537 -47772775 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1138 233 340 154 0 chr13 72511874 72512030 -47772282 - MLT1I-int LTR MaLR -878 509 330 7 1138 620 345 105 9 chr13 72512038 72512356 -47771956 + MLT1A0 LTR MaLR 1 347 -18 1 1138 2170 202 79 2 chr13 72512876 72513308 -47771004 - Lx9 LINE L1 -588 7056 6592 1 1138 389 225 22 0 chr13 72513313 72513402 -47770910 + Lx9 LINE L1 7366 7456 -188 1 1138 405 0 0 0 chr13 72513404 72513449 -47770863 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1138 1279 223 118 6 chr13 72514536 72514865 -47769447 + ORR1D2 LTR MaLR 1 366 -4 1 1138 450 0 0 0 chr13 72515260 72515310 -47769002 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 1 1138 575 260 39 23 chr13 72515346 72515476 -47768836 - B3A SINE B2 -49 149 18 1 1138 396 0 0 0 chr13 72515593 72515637 -47768675 + (CAAAAA)n Simple_repeat Simple_repeat 3 46 0 1 1138 216 0 0 0 chr13 72515641 72515665 -47768647 + (CAAAC)n Simple_repeat Simple_repeat 4 27 0 2 1138 1177 70 0 0 chr13 72516598 72516741 -47767571 + B1_Mm SINE Alu 1 143 -4 2 1138 654 13 0 0 chr13 72516741 72516816 -47767496 + (GAAA)n Simple_repeat Simple_repeat 3 77 0 2 1138 363 60 0 0 chr13 72517150 72517200 -47767112 + (CAAG)n Simple_repeat Simple_repeat 1 50 0 2 1138 22 0 0 0 chr13 72517258 72517280 -47767032 + AT_rich Low_complexity Low_complexity 1 22 0 2 1138 379 231 38 2 chr13 72517294 72517391 -47766921 + ORR1D2 LTR MaLR 216 319 -40 2 1138 704 252 90 76 chr13 72518370 72518658 -47765654 + B4 SINE B4 1 292 0 2 1138 513 179 11 6 chr13 72518658 72518841 -47765471 + (CA)n Simple_repeat Simple_repeat 1 184 0 2 1138 1067 292 28 40 chr13 72518854 72519049 -47765263 - MTE2a LTR MaLR 0 379 191 2 1138 219 88 0 0 chr13 72519049 72519083 -47765229 + (CTTG)n Simple_repeat Simple_repeat 1 34 0 2 1138 1067 282 128 75 chr13 72519083 72519247 -47765065 - MTE2a LTR MaLR -180 239 41 2 1138 22 0 0 0 chr13 72519446 72519468 -47764844 + AT_rich Low_complexity Low_complexity 1 22 0 3 1138 180 178 106 43 chr13 72519612 72519659 -47764653 + MIRc SINE MIR 128 177 -91 3 1138 3382 93 4 15 chr13 72520394 72520551 -47763761 - L1_Mus4 LINE L1 0 6636 6590 3 1138 3480 40 0 0 chr13 72520551 72520947 -47763365 + MTA_Mm LTR MaLR 1 396 0 3 1138 3382 93 4 15 chr13 72520947 72521373 -47762939 - L1_Mus4 LINE L1 -47 6589 6163 3 1138 4558 82 3 0 chr13 72521373 72522147 -47762165 + L1_Mus4 LINE L1 5387 6162 -474 3 1138 390 57 0 0 chr13 72522539 72522592 -47761720 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1138 38604 32 1 0 chr13 72523221 72530343 -47753969 - L1Md_T LINE L1 0 6585 1 3 1138 417 20 0 0 chr13 72530438 72530488 -47753824 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1138 21 0 0 0 chr13 72531274 72531295 -47753017 + AT_rich Low_complexity Low_complexity 1 21 0 3 1138 337 330 85 0 chr13 72531757 72531863 -47752449 + PB1D7 SINE Alu 6 120 0 3 1138 750 288 40 166 chr13 72532204 72532274 -47752038 + MTEa LTR MaLR 8 70 -309 3 1138 1152 90 0 0 chr13 72532274 72532575 -47751737 + (TG)n Simple_repeat Simple_repeat 1 301 0 4 1138 750 288 40 166 chr13 72532575 72532923 -47751389 + MTEa LTR MaLR 71 375 -4 3 1138 1878 250 98 111 chr13 72532924 72533796 -47750516 + RMER13A LTR ERVK 1 860 0 4 1138 872 166 0 20 chr13 72534019 72534167 -47750145 - B1_Mus1 SINE Alu -1 147 3 4 1138 5247 12 0 0 chr13 72535607 72536208 -47748104 - L1Md_T LINE L1 0 6582 6006 4 1138 21 0 0 0 chr13 72538937 72538958 -47745354 + AT_rich Low_complexity Low_complexity 1 21 0 4 1138 275 266 34 42 chr13 72539082 72539200 -47745112 + GA-rich Low_complexity Low_complexity 3 119 0 4 1138 324 342 12 61 chr13 72539200 72539365 -47744947 + HAL1-3A_ME LINE L1 2283 2439 -419 4 1138 294 251 23 23 chr13 72539387 72539562 -47744750 + GA-rich Low_complexity Low_complexity 5 179 0 4 1138 320 284 120 45 chr13 72540469 72540602 -47743710 + Charlie2b DNA MER1_type 2580 2722 -60 4 1138 650 299 6 28 chr13 72540615 72540797 -47743515 + ID_B1 SINE B4 46 223 -1 4 1138 290 295 67 0 chr13 72542464 72542569 -47741743 + B4A SINE B4 1 112 -180 5 1138 1290 263 114 5 chr13 72543435 72543813 -47740499 + MTD LTR MaLR 1 419 0 5 1138 258 319 178 4 chr13 72544749 72544979 -47739333 + B4A SINE B4 5 274 -18 5 1138 231 36 0 0 chr13 72545046 72545074 -47739238 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1138 378 100 0 0 chr13 72546648 72546708 -47737604 + (TG)n Simple_repeat Simple_repeat 2 61 0 5 1138 215 186 23 0 chr13 72547793 72547836 -47736476 + GA-rich Low_complexity Low_complexity 1 44 0 5 1138 234 0 0 0 chr13 72548416 72548442 -47735870 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1138 242 75 0 48 chr13 72548459 72548501 -47735811 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 5 1138 211 238 0 16 chr13 72548516 72548580 -47735732 + (TA)n Simple_repeat Simple_repeat 1 63 0 5 1138 212 164 0 52 chr13 72548808 72548866 -47735446 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 5 1138 695 89 24 35 chr13 72548901 72549156 -47735156 + (TAGA)n Simple_repeat Simple_repeat 1 251 0 5 1138 300 158 0 0 chr13 72552154 72552230 -47732082 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 6 1138 3324 48 5 0 chr13 72553208 72553606 -47730706 - MTB LTR MaLR 0 400 1 6 1138 420 343 85 13 chr13 72554573 72554759 -47729553 + B3A SINE B2 2 189 -6 6 1138 260 338 188 9 chr13 72554956 72555296 -47729016 - L1MC1 LINE L1 -7 6326 5926 6 1138 555 298 144 0 chr13 72558287 72558468 -47725844 - ID_B1 SINE B4 -17 207 1 6 1138 1707 188 66 11 chr13 72559007 72559356 -47724956 + ORR1C1 LTR MaLR 1 368 -10 6 1138 2092 150 65 29 chr13 72559935 72560286 -47724026 + ORR1B2 LTR MaLR 1 364 -3 6 1138 1174 68 0 0 chr13 72561311 72561459 -47722853 - B1_Mus1 SINE Alu 0 148 1 6 1138 780 305 37 33 chr13 72562540 72562811 -47721501 - B4A SINE B4 -3 289 18 6 1138 762 288 16 0 chr13 72562958 72563149 -47721163 - ID_B1 SINE B4 -17 207 14 6 1138 213 39 0 0 chr13 72564530 72564556 -47719756 + (TGGGGG)n Simple_repeat Simple_repeat 1 26 0 7 1138 26 0 0 0 chr13 72565251 72565277 -47719035 + AT_rich Low_complexity Low_complexity 1 26 0 7 1138 489 242 39 88 chr13 72565402 72565583 -47718729 + MTEa LTR MaLR 208 379 0 7 1138 2808 106 5 10 chr13 72565973 72566375 -47717937 - MTB LTR MaLR 0 400 1 7 1138 493 252 101 34 chr13 72567287 72567435 -47716877 + Lx9 LINE L1 7126 7283 -361 7 1138 319 254 0 0 chr13 72567502 72567569 -47716743 + Lx9 LINE L1 7339 7405 -239 7 1138 340 319 97 0 chr13 72567756 72567941 -47716371 - MT2A LTR ERVL -330 203 1 7 1138 239 136 0 0 chr13 72568834 72568878 -47715434 - ID_B1 SINE B4 0 224 181 7 1138 234 245 43 113 chr13 72568878 72568949 -47715363 - B1F SINE Alu 0 149 43 7 1138 721 283 52 5 chr13 72568955 72569147 -47715165 - ID_B1 SINE B4 -22 202 2 7 1138 22 80 0 0 chr13 72569152 72569202 -47715110 + AT_rich Low_complexity Low_complexity 1 50 0 7 1138 326 308 117 39 chr13 72569974 72570231 -47714081 + L1M5 LINE L1 4450 4726 -1420 8 1138 380 252 77 21 chr13 72570735 72570983 -47713329 + L1MA4 LINE L1 5755 6020 -280 8 1138 646 253 121 0 chr13 72571041 72571231 -47713081 + B3 SINE B2 1 213 -3 8 1138 192 200 0 0 chr13 72571338 72571383 -47712929 + G-rich Low_complexity Low_complexity 2 46 0 8 1138 552 126 0 0 chr13 72571379 72571466 -47712846 + (CAGAGA)n Simple_repeat Simple_repeat 2 88 0 8 1138 364 340 101 50 chr13 72571477 72571774 -47712538 + ORR1E LTR MaLR 1 312 -47 8 1138 1928 350 106 29 chr13 72572342 72573641 -47710671 + MTE-int LTR MaLR 147 1546 -34 8 1138 296 317 0 46 chr13 72573627 72573736 -47710576 + ORR1E LTR MaLR 6 109 -250 8 1138 261 139 0 0 chr13 72573819 72573862 -47710450 + (TCCC)n Simple_repeat Simple_repeat 4 46 0 8 1138 297 0 0 0 chr13 72574209 72574242 -47710070 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1138 238 333 76 34 chr13 72574250 72574514 -47709798 + L1M5 LINE L1 5389 5663 -501 8 1138 248 189 0 0 chr13 72574758 72574811 -47709501 - Lx9 LINE L1 -10 7634 7582 9 1138 622 199 82 7 chr13 72574826 72574973 -47709339 - Lx9 LINE L1 -156 7488 7331 9 1138 1254 58 10 69 chr13 72576602 72576765 -47707547 + B2_Mm2 SINE B2 4 157 -38 9 1138 1301 46 17 6 chr13 72576765 72576941 -47707371 + L1Md_F3 LINE L1 6404 6581 -3 9 1138 1254 58 10 69 chr13 72576941 72576981 -47707331 + B2_Mm2 SINE B2 158 195 0 9 1138 280 325 44 38 chr13 72577432 72577592 -47706720 - MER74B LTR ERVL -459 163 3 9 1138 711 337 65 8 chr13 72578248 72578511 -47705801 - B4A SINE B4 -6 286 9 9 1138 489 262 185 36 chr13 72578590 72578871 -47705441 - MTEb LTR MaLR -42 337 15 9 1138 378 0 0 0 chr13 72579486 72579528 -47704784 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 9 1138 558 279 29 0 chr13 72579528 72579664 -47704648 - B1_Mur1 SINE Alu -9 140 1 9 1138 238 293 40 0 chr13 72583211 72583286 -47701026 + MLT1A1 LTR MaLR 21 98 -310 9 1138 2841 36 33 6 chr13 72583865 72584224 -47700088 + L1Md_F3 LINE L1 6215 6583 -1 9 1138 180 0 0 0 chr13 72584884 72584904 -47699408 + (CAAAAA)n Simple_repeat Simple_repeat 5 24 0 1 1138 275 316 18 0 chr13 72585111 72585225 -47699087 + (CATATA)n Simple_repeat Simple_repeat 6 121 0 1 1138 299 156 33 22 chr13 72585226 72585233 -47699079 + (TAGA)n Simple_repeat Simple_repeat 3 9 0 1 1138 315 0 0 0 chr13 72585233 72585268 -47699044 + (GA)n Simple_repeat Simple_repeat 1 35 0 1 1138 299 156 33 22 chr13 72585268 72585352 -47698960 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 1 1138 443 18 18 0 chr13 72585508 72585564 -47698748 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 1138 246 32 0 0 chr13 72585564 72585594 -47698718 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1138 416 244 200 0 chr13 72585597 72585712 -47698600 - B1F SINE Alu -1 148 11 1 1138 243 0 0 0 chr13 72586921 72586948 -47697364 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1138 858 81 0 0 chr13 72586948 72587063 -47697249 - B1_Mus1 SINE Alu -7 141 27 1 1138 415 307 30 52 chr13 72587067 72587201 -47697111 - B1F2 SINE Alu -7 142 12 1 1138 823 267 42 13 chr13 72587308 72587547 -47696765 + B4A SINE B4 43 288 -4 1 1138 6621 117 16 7 chr13 72588130 72589158 -47695154 - L1_Mur2 LINE L1 -964 4913 3876 1 1138 1144 142 94 5 chr13 72589154 72589366 -47694946 - Lx4A LINE L1 -905 6153 5923 1 1138 693 144 0 0 chr13 72590605 72590723 -47693589 + (TCCC)n Simple_repeat Simple_repeat 4 121 0 1 1138 235 318 28 0 chr13 72591284 72591391 -47692921 - MER2 DNA MER2_type -39 306 197 1 1138 325 286 33 0 chr13 72591902 72591993 -47692319 - RMER20B LTR ERVK -464 163 70 1 1138 429 227 11 0 chr13 72591999 72592087 -47692225 - RMER20B LTR ERVK -531 96 8 1 1138 189 0 0 0 chr13 72592100 72592121 -47692191 + (T)n Simple_repeat Simple_repeat 1 21 0 1 1138 567 249 6 51 chr13 72592771 72592811 -47691501 + ID_B1 SINE B4 55 222 0 1 1138 1028 59 0 0 chr13 72592811 72592947 -47691365 + B1_Mm SINE Alu 12 147 0 1 1138 243 0 0 0 chr13 72592949 72592976 -47691336 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1138 354 271 22 52 chr13 72593579 72593715 -47690597 + RLTR23 LTR ERV1 261 392 -38 1 1138 6253 45 49 5 chr13 72593872 72594646 -47689666 + RLTR13C2 LTR ERVK 1 808 0 1 1138 203 0 37 0 chr13 72594885 72594912 -47689400 + (TTG)n Simple_repeat Simple_repeat 1 28 0 1 1138 2058 186 116 51 chr13 72595004 72595513 -47688799 + RLTR19-int LTR ERVK 300 841 -5296 1 1138 4004 77 0 15 chr13 72595513 72596055 -47688257 + L1Md_F2 LINE L1 6047 6580 -2 1 1138 949 186 0 6 chr13 72596055 72596223 -47688089 + RLTR19-int LTR ERVK 926 1092 -5045 1 1138 426 69 0 0 chr13 72596307 72596365 -47687947 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 1 1138 1968 37 4 4 chr13 72597089 72597331 -47686981 + L1Md_F3 LINE L1 6343 6584 0 1 1138 440 202 19 9 chr13 72597343 72597448 -47686864 + RLTR19-int LTR ERVK 1346 1451 -1787 1 1138 4810 161 39 104 chr13 72597468 72598560 -47685752 + RLTR19-int LTR ERVK 2220 3239 -2898 1 1138 2963 153 27 23 chr13 72598574 72599089 -47685223 + RLTR19-int LTR ERVK 3881 4397 -1740 1 1138 465 275 16 62 chr13 72599737 72599931 -47684381 + RLTR23 LTR ERV1 246 430 0 1 1138 275 304 46 46 chr13 72600897 72601028 -47683284 + MamRep434 DNA TcMar 3 133 -293 1 1138 1097 92 6 0 chr13 72601669 72601833 -47682479 + (TC)n Simple_repeat Simple_repeat 1 165 0 1 1138 386 20 20 0 chr13 72601833 72601883 -47682429 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1138 1409 199 113 0 chr13 72601914 72602241 -47682071 + ORR1D2 LTR MaLR 5 368 -2 1 1138 751 295 8 126 chr13 72602440 72602836 -47681476 + MTE2a LTR MaLR 4 317 -62 1 1138 372 317 5 118 chr13 72605032 72605218 -47679094 + RSINE1 SINE B4 1 165 0 1 1138 234 0 0 0 chr13 72607403 72607429 -47676883 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1138 252 0 0 0 chr13 72607429 72607456 -47676856 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 1138 228 35 0 0 chr13 72609377 72609406 -47674906 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1138 974 303 90 17 chr13 72610165 72610521 -47673791 - Lx8 LINE L1 -766 6707 6326 1 1138 198 0 0 0 chr13 72610643 72610665 -47673647 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 1 1138 416 302 54 0 chr13 72610692 72610821 -47673491 - RSINE1 SINE B4 -22 143 8 1 1138 1021 316 46 19 chr13 72611104 72611475 -47672837 + Lx8 LINE L1 6704 7084 -389 1 1138 196 176 0 50 chr13 72611486 72611546 -47672766 + GA-rich Low_complexity Low_complexity 1 57 0 1 1138 2346 96 12 6 chr13 72611679 72612004 -47672308 + ORR1A2 LTR MaLR 1 327 0 1 1138 187 54 26 26 chr13 72612007 72612045 -47672267 + (CAAA)n Simple_repeat Simple_repeat 4 41 0 1 1138 1952 119 20 62 chr13 72613031 72613372 -47670940 + ORR1A2 LTR MaLR 1 327 0 1 1139 249 231 44 80 chr13 72616428 72616541 -47667771 + RMER12 LTR ERVK 745 853 -469 1 1139 251 203 16 0 chr13 72616555 72616619 -47667693 + (TA)n Simple_repeat Simple_repeat 1 65 0 1 1139 416 217 14 14 chr13 72616636 72616781 -47667531 + (TA)n Simple_repeat Simple_repeat 1 145 0 1 1139 383 208 8 0 chr13 72616805 72616925 -47667387 + (TG)n Simple_repeat Simple_repeat 2 122 0 1 1139 378 0 0 0 chr13 72619454 72619496 -47664816 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1139 528 272 69 78 chr13 72619699 72619930 -47664382 - ORR1E LTR MaLR -109 250 22 1 1139 435 19 0 0 chr13 72620000 72620052 -47664260 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1139 287 315 16 16 chr13 72620096 72620225 -47664087 + (TATG)n Simple_repeat Simple_repeat 2 130 0 1 1139 303 175 0 0 chr13 72620232 72620289 -47664023 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1139 203 270 15 31 chr13 72620352 72620417 -47663895 + (TATATG)n Simple_repeat Simple_repeat 4 67 0 1 1139 332 340 126 55 chr13 72620426 72620697 -47663615 - B4A SINE B4 0 292 3 1 1139 2794 175 29 12 chr13 72620767 72621286 -47663026 + RLTR11A LTR ERVK 1 528 0 1 1139 396 289 31 122 chr13 72621324 72621350 -47662962 + B3 SINE B2 2 25 -191 1 1139 3799 106 93 2 chr13 72621350 72621898 -47662414 - MT2B LTR ERVL -2 599 2 1 1139 396 289 31 122 chr13 72621898 72622100 -47662212 + B3 SINE B2 26 209 -7 1 1139 385 173 0 26 chr13 72623126 72623203 -47661109 - ID SINE ID -149 75 1 1 1139 267 175 0 0 chr13 72623255 72623312 -47661000 + (CATA)n Simple_repeat Simple_repeat 3 59 0 1 1139 413 379 6 0 chr13 72623315 72623492 -47660820 + (CA)n Simple_repeat Simple_repeat 1 178 0 1 1139 267 333 9 17 chr13 72623925 72624041 -47660271 + (CAT)n Simple_repeat Simple_repeat 3 117 0 1 1139 229 176 59 0 chr13 72624536 72624587 -47659725 + GA-rich Low_complexity Low_complexity 2 55 0 1 1139 265 183 146 97 chr13 72624592 72624613 -47659699 + MT2B LTR ERVL 149 174 -427 1 1139 545 142 195 0 chr13 72624613 72624726 -47659586 + B1_Mus1 SINE Alu 1 135 -13 1 1139 191 36 0 35 chr13 72624726 72624755 -47659557 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 1 1139 315 327 84 101 chr13 72624834 72625120 -47659192 - MLT1E LTR MaLR -4 649 369 1 1139 1343 27 17 16 chr13 72625291 72625812 -47658500 + (TAGA)n Simple_repeat Simple_repeat 1 521 0 1 1139 1331 46 21 21 chr13 72625825 72626360 -47657952 + (TAGA)n Simple_repeat Simple_repeat 1 535 0 1 1139 414 85 0 0 chr13 72626360 72626418 -47657894 + (CATA)n Simple_repeat Simple_repeat 2 60 0 1 1139 227 255 43 43 chr13 72626418 72626451 -47657861 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 1 1139 260 272 53 115 chr13 72626454 72626482 -47657830 - MLT2B2 LTR ERVL -20 535 505 1 1139 1288 17 17 22 chr13 72626482 72626663 -47657649 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 1 1139 534 103 0 0 chr13 72626663 72626749 -47657563 + (CATA)n Simple_repeat Simple_repeat 2 88 0 1 1139 260 272 53 115 chr13 72626749 72626789 -47657523 - MLT2B2 LTR ERVL -51 504 471 1 1139 563 53 31 21 chr13 72626789 72626886 -47657426 + (TAGA)n Simple_repeat Simple_repeat 2 99 0 1 1139 372 312 95 70 chr13 72626886 72627315 -47656997 - MLT2B2 LTR ERVL -85 470 8 1 1139 592 273 114 38 chr13 72627819 72628055 -47656257 - Lx8 LINE L1 -247 7226 6973 1 1139 321 125 0 97 chr13 72628310 72628372 -47655940 + HAL1-3A_ME LINE L1 1976 2031 -827 1 1139 242 319 106 21 chr13 72628378 72628660 -47655652 + L1MEg LINE L1 631 936 -5148 1 1139 3306 192 52 20 chr13 72629520 72630217 -47654095 - RMER6D LTR ERVK 0 720 2 1 1139 294 29 0 0 chr13 72630577 72630612 -47653700 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1139 5714 90 21 1 chr13 72630763 72631554 -47652758 - L1_Mus3 LINE L1 -7 6631 5825 1 1139 3125 95 0 0 chr13 72631554 72631963 -47652349 + L1_Mus3 LINE L1 5409 5817 -66 1 1139 2485 133 34 74 chr13 72636012 72636460 -47647852 - RLTR23 LTR ERV1 0 430 1 1 1139 1182 34 0 0 chr13 72637311 72637457 -47646855 + L1Md_A LINE L1 6437 6582 0 1 1139 21 0 0 0 chr13 72637952 72637973 -47646339 + AT_rich Low_complexity Low_complexity 1 21 0 1 1139 3340 175 119 5 chr13 72638012 72638673 -47645639 - RMER19A LTR ERVK 0 737 1 1 1139 1631 222 43 34 chr13 72639019 72639433 -47644879 - MTD LTR MaLR -1 418 1 1 1139 27 49 0 0 chr13 72640608 72640649 -47643663 + AT_rich Low_complexity Low_complexity 1 41 0 1 1139 198 0 0 0 chr13 72641146 72641168 -47643144 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1 1139 507 17 0 0 chr13 72642976 72643036 -47641276 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1139 4315 137 81 1 chr13 72643130 72643811 -47640501 + RMER19A LTR ERVK 1 735 -2 1 1139 1422 200 47 34 chr13 72644699 72645020 -47639292 - MTC LTR MaLR -96 325 1 1 1139 1474 232 52 22 chr13 72645385 72645786 -47638526 + MTD LTR MaLR 6 418 -1 1 1139 993 137 0 0 chr13 72647807 72648063 -47636249 + (TAGA)n Simple_repeat Simple_repeat 1 256 0 1 1139 333 0 0 0 chr13 72649321 72649358 -47634954 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1139 272 83 21 0 chr13 72649358 72649405 -47634907 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1139 218 140 35 0 chr13 72649422 72649479 -47634833 + (TCTG)n Simple_repeat Simple_repeat 4 62 0 1 1139 942 120 0 0 chr13 72649490 72649665 -47634647 + (TC)n Simple_repeat Simple_repeat 2 176 0 1 1139 711 260 94 67 chr13 72650372 72650714 -47633598 + ORR1E LTR MaLR 4 354 -5 1 1139 335 303 101 12 chr13 72650719 72650955 -47633357 + MLT1A0 LTR MaLR 89 447 -20 1 1139 21 0 0 0 chr13 72651400 72651421 -47632891 + AT_rich Low_complexity Low_complexity 1 21 0 1 1139 423 83 0 0 chr13 72652991 72653051 -47631261 + (TA)n Simple_repeat Simple_repeat 1 60 0 2 1139 772 258 6 6 chr13 72653076 72653255 -47631057 - B3 SINE B2 -37 179 1 2 1139 237 295 63 32 chr13 72653875 72654001 -47630311 - L1M5 LINE L1 -435 5727 5598 2 1139 21 36 0 0 chr13 72654181 72654209 -47630103 + AT_rich Low_complexity Low_complexity 1 28 0 2 1139 266 154 0 0 chr13 72654220 72654272 -47630040 - MT2A LTR ERVL 0 533 482 2 1139 27 92 0 0 chr13 72654272 72654348 -47629964 + AT_rich Low_complexity Low_complexity 1 76 0 2 1139 1824 248 43 2 chr13 72654359 72654799 -47629513 - MT2A LTR ERVL -74 459 2 2 1139 41 48 0 0 chr13 72655350 72655412 -47628900 + AT_rich Low_complexity Low_complexity 1 62 0 2 1139 21 36 0 0 chr13 72655451 72655479 -47628833 + AT_rich Low_complexity Low_complexity 1 28 0 2 1139 275 258 237 7 chr13 72656046 72656198 -47628114 - L1M5 LINE L1 -2535 3611 3425 2 1139 226 225 0 0 chr13 72656384 72656424 -47627888 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1139 5761 78 0 13 chr13 72657292 72658059 -47626253 + L1_Mus1 LINE L1 5810 6566 -1 2 1139 859 317 165 38 chr13 72658072 72658816 -47625496 + MTE-int LTR MaLR 67 905 -675 2 1139 23681 65 1 1 chr13 72659808 72662819 -47621493 + L1Md_F2 LINE L1 2573 5585 -298 2 1139 8374 37 0 9 chr13 72662820 72663816 -47620496 + L1Md_F2 LINE L1 5587 6573 -9 2 1139 189 0 0 0 chr13 72663835 72663856 -47620456 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1139 4607 151 11 4 chr13 72664146 72664878 -47619434 + RMER19A LTR ERVK 1 737 0 2 1139 21 0 0 0 chr13 72666147 72666168 -47618144 + AT_rich Low_complexity Low_complexity 1 21 0 2 1139 8456 38 2 1 chr13 72666215 72667383 -47616929 - L1Md_F2 LINE L1 -5 6577 5409 2 1139 3695 62 0 8 chr13 72667377 72667849 -47616463 + L1Md_F2 LINE L1 4904 5371 -512 2 1139 380 289 0 0 chr13 72667849 72667946 -47616366 - MER2 DNA MER2_type -122 223 127 2 1139 473 281 0 109 chr13 72667995 72668187 -47616125 + MTEa LTR MaLR 203 373 -6 2 1139 418 304 60 86 chr13 72668187 72668421 -47615891 + MTEa-int LTR MaLR 9 236 -1344 2 1139 1042 280 68 14 chr13 72668429 72668784 -47615528 - MTE2b LTR MaLR -5 374 1 2 1139 2505 313 83 51 chr13 72668784 72669889 -47614423 + MTEa-int LTR MaLR 235 1372 -208 2 1139 1623 213 18 34 chr13 72669889 72670269 -47614043 - ORR1D1 LTR MaLR 0 374 1 2 1139 2505 313 83 51 chr13 72670269 72670400 -47613912 + MTEa-int LTR MaLR 1373 1511 -69 2 1139 669 306 83 40 chr13 72670417 72670744 -47613568 + ORR1E LTR MaLR 4 344 -15 2 1139 504 0 0 0 chr13 72671257 72671313 -47612999 + (TC)n Simple_repeat Simple_repeat 1 56 0 2 1139 432 0 0 0 chr13 72671313 72671360 -47612952 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1139 251 140 0 20 chr13 72672245 72672296 -47612016 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1139 448 312 6 28 chr13 72672309 72672490 -47611822 + (TATG)n Simple_repeat Simple_repeat 3 179 0 2 1139 625 326 92 18 chr13 72672499 72672569 -47611743 - B4 SINE B4 0 292 226 2 1139 336 24 0 0 chr13 72672569 72672610 -47611702 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 2 1139 625 326 92 18 chr13 72672610 72672811 -47611501 - B4 SINE B4 -67 225 3 2 1139 202 185 0 36 chr13 72677030 72677086 -47607226 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1139 468 51 0 0 chr13 72678256 72678315 -47605997 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1139 261 0 0 0 chr13 72678315 72678343 -47605969 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1139 299 175 0 24 chr13 72678431 72678513 -47605799 + CT-rich Low_complexity Low_complexity 3 82 0 2 1139 607 290 15 63 chr13 72678547 72678753 -47605559 - B4 SINE B4 -95 197 2 2 1139 22 0 0 0 chr13 72678805 72678827 -47605485 + AT_rich Low_complexity Low_complexity 1 22 0 2 1139 671 309 57 35 chr13 72679832 72680114 -47604198 + B4A SINE B4 1 288 -4 2 1139 447 68 0 0 chr13 72680121 72680180 -47604132 + (CA)n Simple_repeat Simple_repeat 1 59 0 2 1139 239 202 11 35 chr13 72680415 72680502 -47603810 + GA-rich Low_complexity Low_complexity 3 87 0 2 1139 21 36 0 0 chr13 72681336 72681364 -47602948 + AT_rich Low_complexity Low_complexity 1 28 0 2 1139 280 352 33 60 chr13 72681488 72681639 -47602673 + B4A SINE B4 29 175 -117 2 1139 652 195 8 0 chr13 72682879 72683021 -47601291 + B1_Mur4 SINE Alu 2 143 -6 2 1139 234 286 92 37 chr13 72683486 72683595 -47600717 + PB1D10 SINE Alu 1 115 -2 2 1139 397 272 111 32 chr13 72683654 72683844 -47600468 + B3A SINE B2 7 211 -5 2 1139 393 103 0 0 chr13 72684460 72684528 -47599784 + (TC)n Simple_repeat Simple_repeat 2 69 0 2 1139 375 311 0 7 chr13 72684528 72684664 -47599648 + (TG)n Simple_repeat Simple_repeat 1 135 0 2 1139 1467 75 5 0 chr13 72684739 72684927 -47599385 + B2_Mm1t SINE B2 2 190 -3 2 1139 1151 75 0 0 chr13 72686222 72686369 -47597943 + B1_Mus2 SINE Alu 1 147 0 2 1139 2786 197 68 38 chr13 72686452 72687198 -47597114 + RMER1B Other Other 365 1020 -10 2 1139 3586 83 0 0 chr13 72688953 72689423 -47594889 + L1Md_T LINE L1 6113 6582 0 2 1139 773 234 62 6 chr13 72689465 72689641 -47594671 + B3 SINE B2 4 189 -27 2 1139 520 326 98 11 chr13 72689827 72690103 -47594209 + RMER15 LTR ERVL 276 575 0 2 1139 333 0 0 0 chr13 72690458 72690495 -47593817 + (TTG)n Simple_repeat Simple_repeat 2 38 0 2 1139 3580 38 2 0 chr13 72690755 72691178 -47593134 + L1Md_F2 LINE L1 5163 5586 -297 2 1139 8539 39 0 0 chr13 72691178 72692174 -47592138 + L1Md_F2 LINE L1 5587 6582 0 2 1139 201 39 0 0 chr13 72694306 72694332 -47589980 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1139 1453 257 60 65 chr13 72696914 72697507 -47586805 + Lx9 LINE L1 5920 6630 -1014 2 1139 459 52 0 0 chr13 72697591 72697649 -47586663 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1139 605 332 118 20 chr13 72697680 72697926 -47586386 - B4A SINE B4 -1 291 22 2 1139 383 0 21 0 chr13 72699331 72699378 -47584934 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1139 186 103 0 0 chr13 72699378 72699407 -47584905 + (CCA)n Simple_repeat Simple_repeat 1 29 0 2 1139 249 374 18 55 chr13 72700039 72700203 -47584109 + MIR SINE MIR 66 223 -45 2 1139 913 303 38 67 chr13 72700429 72700772 -47583540 - Lx9 LINE L1 -954 6690 6358 2 1139 603 0 0 0 chr13 72700793 72700860 -47583452 + (GA)n Simple_repeat Simple_repeat 2 68 0 2 1139 447 141 0 0 chr13 72701106 72701184 -47583128 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1139 330 265 83 57 chr13 72701306 72701393 -47582919 + Lx7 LINE L1 7471 7554 -142 2 1139 183 80 0 0 chr13 72701393 72701418 -47582894 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2 1139 330 265 83 57 chr13 72701418 72701522 -47582790 + Lx7 LINE L1 7555 7666 -30 2 1139 6822 96 61 11 chr13 72701524 72702519 -47581793 + L1_Mus4 LINE L1 5587 6631 -5 2 1139 61 27 0 0 chr13 72702597 72702672 -47581640 + AT_rich Low_complexity Low_complexity 1 75 0 2 1139 454 314 133 5 chr13 72703256 72703467 -47580845 + ORR1E LTR MaLR 1 238 -121 2 1139 631 322 87 25 chr13 72703954 72704355 -47579957 - L1MB7 LINE L1 -308 5876 5451 2 1139 1730 291 86 97 chr13 72704395 72705292 -47579020 - L1MB7 LINE L1 -756 5390 4460 2 1139 1068 147 27 21 chr13 72705292 72705480 -47578832 + B2_Mm2 SINE B2 1 189 -6 2 1139 1730 291 86 97 chr13 72705480 72705959 -47578353 - L1MB7 LINE L1 -1687 4459 4028 2 1139 396 223 0 0 chr13 72705973 72706076 -47578236 + (TTG)n Simple_repeat Simple_repeat 3 105 0 2 1139 1467 73 16 0 chr13 72706331 72706522 -47577790 - B2_Mm2 SINE B2 0 195 2 2 1139 760 194 52 0 chr13 72706528 72706662 -47577650 - B1_Mus2 SINE Alu -6 141 1 2 1139 207 0 0 0 chr13 72706680 72706703 -47577609 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2 1139 504 117 0 0 chr13 72706717 72706794 -47577518 + (TA)n Simple_repeat Simple_repeat 1 77 0 2 1139 1321 53 5 36 chr13 72706904 72707099 -47577213 + L1Md_F2 LINE L1 6393 6581 -1 2 1139 1102 65 0 0 chr13 72707230 72707368 -47576944 - B1_Mus2 SINE Alu -9 138 1 2 1139 37 69 0 0 chr13 72707455 72707527 -47576785 + AT_rich Low_complexity Low_complexity 1 72 0 2 1139 506 298 37 18 chr13 72707556 72707720 -47576592 - B3A SINE B2 -22 176 10 2 1139 1535 50 15 0 chr13 72707740 72707941 -47576371 - L1Md_F3 LINE L1 0 6584 6381 2 1139 381 164 0 0 chr13 72708166 72708239 -47576073 + (TG)n Simple_repeat Simple_repeat 2 74 0 2 1139 221 0 0 33 chr13 72709801 72709831 -47574481 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1139 469 242 6 17 chr13 72711367 72711548 -47572764 + (CA)n Simple_repeat Simple_repeat 2 180 0 2 1139 1166 103 16 5 chr13 72711639 72711810 -47572502 + B2_Mm2 SINE B2 8 180 -15 2 1139 1118 82 0 7 chr13 72711810 72711958 -47572354 + B1_Mus1 SINE Alu 2 148 0 2 1139 1166 103 16 5 chr13 72711958 72711972 -47572340 + B2_Mm2 SINE B2 181 194 -1 2 1139 382 322 218 16 chr13 72712151 72712514 -47571798 - Lx9 LINE L1 -22 7622 7187 2 1139 400 312 36 36 chr13 72715709 72715902 -47568410 - L1MA6 LINE L1 -7 6293 6101 2 1139 801 0 0 0 chr13 72716202 72716291 -47568021 + (TTTCC)n Simple_repeat Simple_repeat 3 91 0 2 1139 228 220 0 0 chr13 72716296 72716346 -47567966 - L1VL2 LINE L1 -5843 492 443 2 1139 258 282 53 15 chr13 72716410 72716543 -47567769 - L1MA6 LINE L1 -899 5392 5255 2 1139 310 216 169 39 chr13 72716982 72717112 -47567200 + L1M2 LINE L1 4574 4720 -1423 2 1139 959 281 85 16 chr13 72717114 72717456 -47566856 + ORR1D2 LTR MaLR 1 416 -5 2 1139 463 279 196 11 chr13 72717457 72717809 -47566503 + L1M2 LINE L1 4739 5155 -988 2 1139 297 340 0 10 chr13 72719377 72719481 -47564831 + CT-rich Low_complexity Low_complexity 3 105 0 2 1139 4446 102 36 5 chr13 72719484 72720126 -47564186 - Lx LINE L1 -1 6653 5992 2 1139 273 294 0 66 chr13 72722031 72722122 -47562190 + MTEa LTR MaLR 31 115 -264 2 1139 495 317 162 4 chr13 72722196 72722424 -47561888 + MT2A LTR ERVL 253 516 -17 2 1139 851 239 190 11 chr13 72722880 72723159 -47561153 + ORR1D2 LTR MaLR 42 370 0 2 1139 306 268 12 0 chr13 72724622 72724704 -47559608 + (TGGA)n Simple_repeat Simple_repeat 4 86 0 2 1139 2019 262 56 30 chr13 72724722 72725293 -47559019 + MTC-int LTR MaLR 413 998 -260 2 1139 191 36 0 35 chr13 72725293 72725322 -47558990 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 2 1139 874 180 0 21 chr13 72725324 72725466 -47558846 - B1_Mur3 SINE Alu -6 143 5 2 1139 606 231 74 102 chr13 72725463 72725748 -47558564 + MTC-int LTR MaLR 982 1258 0 2 1139 1849 228 12 10 chr13 72725748 72726165 -47558147 + MTC LTR MaLR 1 418 -3 2 1139 185 183 0 16 chr13 72726185 72726246 -47558066 + (TGGG)n Simple_repeat Simple_repeat 2 61 0 2 1139 1008 288 90 15 chr13 72726326 72726661 -47557651 + MTEb LTR MaLR 20 379 0 2 1139 303 297 0 66 chr13 72729488 72729654 -47554658 + GA-rich Low_complexity Low_complexity 1 155 0 3 1139 284 278 99 27 chr13 72733227 72733338 -47550974 - PB1D7 SINE Alu -1 119 1 3 1139 301 250 8 8 chr13 72735081 72735206 -47549106 + (CA)n Simple_repeat Simple_repeat 2 126 0 3 1139 252 241 169 50 chr13 72735211 72735412 -47548900 - RLTR21 LTR ERVK -264 1308 1084 3 1139 278 228 22 14 chr13 72735463 72735601 -47548711 + (CATA)n Simple_repeat Simple_repeat 4 142 0 3 1139 300 55 0 52 chr13 72737981 72738039 -47546273 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1139 312 336 36 29 chr13 72738076 72738214 -47546098 + L1M5 LINE L1 3375 3513 -2633 3 1139 914 167 194 0 chr13 72738443 72738623 -47545689 + B3 SINE B2 2 216 0 3 1139 266 288 0 0 chr13 72738887 72738953 -47545359 - ID4 SINE ID -2 81 16 3 1139 315 289 60 40 chr13 72739465 72739719 -47544593 + L1MEc LINE L1 2246 2534 -4568 3 1139 1638 220 55 30 chr13 72740294 72740692 -47543620 + MTD LTR MaLR 10 417 -2 3 1139 373 268 94 23 chr13 72740747 72741003 -47543309 + L1MEc LINE L1 2889 3162 -3925 3 1139 191 191 16 0 chr13 72741966 72742029 -47542283 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 1139 1027 182 103 0 chr13 72742124 72742327 -47541985 - URR1A DNA MER1_type -2 224 1 3 1139 189 0 0 0 chr13 72742826 72742847 -47541465 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 1139 586 265 0 22 chr13 72742875 72743010 -47541302 + B1F SINE Alu 16 147 -2 3 1139 710 89 0 9 chr13 72743094 72743207 -47541105 + (GAAAA)n Simple_repeat Simple_repeat 1 112 0 3 1139 225 232 48 57 chr13 72743248 72743353 -47540959 + L1MEc LINE L1 4083 4186 -2820 3 1139 297 341 100 36 chr13 72743638 72744338 -47539974 + L1MEc LINE L1 4611 5355 -1651 3 1139 1189 214 162 6 chr13 72744343 72744370 -47539942 - ORR1D2 LTR MaLR 0 370 343 3 1139 186 43 0 0 chr13 72744370 72744393 -47539919 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1139 1189 214 162 6 chr13 72744393 72744685 -47539627 - ORR1D2 LTR MaLR -28 342 2 3 1140 370 324 118 45 chr13 72745190 72745290 -47539022 + L1MEc LINE L1 6212 6319 -720 3 1140 540 0 0 0 chr13 72745290 72745350 -47538962 + (GA)n Simple_repeat Simple_repeat 2 61 0 3 1140 370 324 118 45 chr13 72745350 72745562 -47538750 + L1MEc LINE L1 6320 6546 -493 3 1140 708 245 73 0 chr13 72745620 72745771 -47538541 + RSINE1 SINE B4 4 165 0 3 1140 320 287 116 52 chr13 72745771 72745793 -47538519 + B2_Mm2 SINE B2 3 186 -9 3 1140 681 163 6 27 chr13 72746032 72746215 -47538097 + (TG)n Simple_repeat Simple_repeat 2 180 0 3 1140 271 303 109 14 chr13 72746310 72746457 -47537855 + MLT1C LTR MaLR 291 451 -16 3 1140 206 268 0 31 chr13 72746597 72746724 -47537588 + CT-rich Low_complexity Low_complexity 2 124 0 3 1140 393 275 0 62 chr13 72747141 72747269 -47537043 - B3 SINE B2 -95 121 2 3 1140 437 250 18 9 chr13 72747281 72747390 -47536922 - PB1D9 SINE Alu -9 111 2 3 1140 299 341 95 32 chr13 72748165 72748386 -47535926 + MLT1B LTR MaLR 115 349 -41 3 1140 662 35 12 0 chr13 72749042 72749127 -47535185 + (TAGA)n Simple_repeat Simple_repeat 2 87 0 3 1140 717 153 0 0 chr13 72750097 72750221 -47534091 + GA-rich Low_complexity Low_complexity 4 127 0 3 1140 1046 128 0 6 chr13 72750223 72750396 -47533916 + (GGGAA)n Simple_repeat Simple_repeat 4 175 0 3 1140 493 263 146 44 chr13 72750541 72750835 -47533477 - Lx9 LINE L1 0 7644 7321 3 1140 2417 145 31 45 chr13 72750967 72751386 -47532926 - MTC LTR MaLR -8 413 1 3 1140 423 274 130 31 chr13 72751470 72751632 -47532680 + B3A SINE B2 5 182 -16 3 1140 541 234 0 7 chr13 72751669 72751948 -47532364 + (CA)n Simple_repeat Simple_repeat 1 276 0 3 1140 271 269 68 57 chr13 72752635 72752812 -47531500 - L1M3 LINE L1 -662 5518 5340 3 1140 214 162 0 0 chr13 72752974 72753011 -47531301 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1140 659 254 58 29 chr13 72753021 72753195 -47531117 - B3A SINE B2 -18 180 2 3 1140 1412 223 69 47 chr13 72753896 72754258 -47530054 - ORR1D2 LTR MaLR 0 370 1 3 1140 237 323 88 29 chr13 72754443 72754580 -47529732 - ID_B1 SINE B4 -72 152 8 3 1140 284 215 109 14 chr13 72754496 72754587 -47529725 - ID4_ SINE ID -54 98 1 3 1140 189 0 0 0 chr13 72754618 72754639 -47529673 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1140 383 254 7 48 chr13 72755154 72755299 -47529013 + L1MA4 LINE L1 5767 5905 -395 3 1140 512 248 43 36 chr13 72755650 72755788 -47528524 + B1_Mm SINE Alu 3 141 -6 3 1140 303 303 64 52 chr13 72755868 72756195 -47528117 + L1M4 LINE L1 4373 4703 -1443 3 1140 276 30 0 0 chr13 72756328 72756361 -47527951 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1140 428 299 0 22 chr13 72756407 72756544 -47527768 + (CATATA)n Simple_repeat Simple_repeat 5 138 0 3 1140 351 297 38 106 chr13 72756573 72756600 -47527712 + L1M4 LINE L1 5094 5118 -1028 3 1140 231 114 0 0 chr13 72756600 72756635 -47527677 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 1140 351 297 38 106 chr13 72756635 72756844 -47527468 + L1M4 LINE L1 5119 5313 -833 3 1140 424 236 0 0 chr13 72757074 72757146 -47527166 - B1_Mur4 SINE Alu -65 85 14 3 1140 515 238 0 71 chr13 72757275 72757415 -47526897 + ID_B1 SINE B4 94 223 -1 3 1140 23 33 0 0 chr13 72757505 72757535 -47526777 + AT_rich Low_complexity Low_complexity 1 30 0 3 1140 818 116 16 0 chr13 72757548 72757669 -47526643 + Lx9 LINE L1 7352 7474 -170 3 1140 998 60 8 0 chr13 72757669 72757803 -47526509 + (GA)n Simple_repeat Simple_repeat 1 135 0 3 1140 32 26 0 0 chr13 72757821 72757860 -47526452 + AT_rich Low_complexity Low_complexity 1 39 0 3 1140 801 249 39 10 chr13 72757884 72758087 -47526225 + B3 SINE B2 1 209 -7 3 1140 382 264 51 60 chr13 72758350 72758467 -47525845 + MT2B LTR ERVL 152 267 -334 3 1140 735 181 82 15 chr13 72758366 72758501 -47525811 + B1_Mur3 SINE Alu 6 149 0 3 1140 971 234 70 55 chr13 72758546 72758858 -47525454 - ORR1E LTR MaLR -15 344 28 3 1140 213 102 51 0 chr13 72763426 72763485 -47520827 + (TTG)n Simple_repeat Simple_repeat 2 63 0 3 1140 327 232 0 0 chr13 72763963 72764045 -47520267 + (TA)n Simple_repeat Simple_repeat 1 82 0 3 1140 759 22 0 0 chr13 72764392 72764481 -47519831 + (TTCCC)n Simple_repeat Simple_repeat 4 92 0 3 1140 250 222 0 0 chr13 72766080 72766134 -47518178 + C-rich Low_complexity Low_complexity 1 54 0 3 1140 23 0 0 0 chr13 72766483 72766506 -47517806 + GC_rich Low_complexity Low_complexity 1 23 0 3 1140 211 93 47 0 chr13 72767128 72767171 -47517141 + (TGGGGG)n Simple_repeat Simple_repeat 2 46 0 3 1140 189 0 0 0 chr13 72770284 72770305 -47514007 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1140 423 56 0 0 chr13 72773530 72773584 -47510728 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 3 1140 1008 0 0 0 chr13 72773584 72773696 -47510616 + (GAGAA)n Simple_repeat Simple_repeat 5 116 0 3 1140 22 56 0 0 chr13 72774658 72774694 -47509618 + AT_rich Low_complexity Low_complexity 1 36 0 3 1140 219 111 21 43 chr13 72775675 72775722 -47508590 + C-rich Low_complexity Low_complexity 3 48 0 3 1140 23 0 0 0 chr13 72777946 72777969 -47506343 + GC_rich Low_complexity Low_complexity 1 23 0 3 1140 767 210 170 6 chr13 72779301 72779483 -47504829 + ID_B1 SINE B4 11 222 -2 3 1140 221 295 0 16 chr13 72779918 72779980 -47504332 + CT-rich Low_complexity Low_complexity 2 62 0 3 1140 574 219 24 24 chr13 72780001 72780127 -47504185 - B1_Mur1 SINE Alu -19 130 5 3 1140 240 185 0 0 chr13 72780982 72781036 -47503276 + (TTAGGG)n Simple_repeat Simple_repeat 6 59 0 3 1140 1616 260 52 5 chr13 72781048 72781435 -47502877 - MTD LTR MaLR 0 419 15 3 1140 333 0 0 0 chr13 72781723 72781760 -47502552 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1140 26 0 0 0 chr13 72781864 72781890 -47502422 + AT_rich Low_complexity Low_complexity 1 26 0 3 1140 273 294 103 29 chr13 72782116 72782291 -47502021 - MER53 DNA hAT -1 192 5 3 1140 1529 245 28 3 chr13 72782490 72782850 -47501462 + ORR1D2 LTR MaLR 1 369 -1 3 1140 249 306 16 0 chr13 72782960 72783022 -47501290 - ORR1D1 LTR MaLR -285 89 27 3 1140 980 268 40 32 chr13 72783542 72783789 -47500523 + MTEb LTR MaLR 21 269 -110 3 1140 1063 257 66 56 chr13 72784104 72784484 -47499828 - MTE2a LTR MaLR -14 405 20 3 1140 3961 110 154 19 chr13 72785147 72785796 -47498516 - RMER19A LTR ERVK 0 737 1 3 1140 703 145 157 44 chr13 72787508 72787667 -47496645 + Lx4A LINE L1 6882 7058 0 3 1140 280 336 0 16 chr13 72787960 72788084 -47496228 + (CA)n Simple_repeat Simple_repeat 1 122 0 3 1140 495 0 0 0 chr13 72788763 72788818 -47495494 + (TTA)n Simple_repeat Simple_repeat 3 57 0 3 1140 13559 127 21 1 chr13 72788818 72791737 -47492575 - L1_Mus4 LINE L1 -19 6617 3640 3 1140 225 0 0 0 chr13 72793164 72793189 -47491123 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1140 24 32 0 0 chr13 72794189 72794220 -47490092 + AT_rich Low_complexity Low_complexity 1 31 0 3 1140 1203 272 23 104 chr13 72794374 72795062 -47489250 - RMER19C LTR ERVK -58 844 1 3 1140 25 75 0 0 chr13 72797793 72797846 -47486466 + AT_rich Low_complexity Low_complexity 1 53 0 3 1140 1600 67 174 25 chr13 72799133 72799408 -47484904 - RLTR10A LTR ERVK 0 411 96 3 1140 473 228 0 7 chr13 72799780 72799917 -47484395 + (TCCA)n Simple_repeat Simple_repeat 4 139 0 3 1140 209 306 16 0 chr13 72799926 72799988 -47484324 + CT-rich Low_complexity Low_complexity 3 65 0 3 1140 675 98 8 24 chr13 72800000 72800125 -47484187 + (TCTA)n Simple_repeat Simple_repeat 3 125 0 3 1140 22 35 0 0 chr13 72800754 72800783 -47483529 + AT_rich Low_complexity Low_complexity 1 29 0 3 1140 385 239 7 7 chr13 72801091 72801230 -47483082 + (TG)n Simple_repeat Simple_repeat 2 140 0 3 1140 364 293 60 42 chr13 72801250 72801467 -47482845 + RMER12 LTR ERVK 770 990 -332 3 1140 199 244 8 40 chr13 72801468 72801592 -47482720 + (TATG)n Simple_repeat Simple_repeat 1 120 0 3 1140 387 309 52 64 chr13 72801602 72801664 -47482648 - B4A SINE B4 -4 288 118 3 1140 416 200 108 54 chr13 72801664 72801775 -47482537 - B1F2 SINE Alu 0 149 33 3 1140 511 332 29 37 chr13 72801758 72801999 -47482313 - B4A SINE B4 -44 248 10 4 1140 256 280 151 0 chr13 72805197 72805290 -47479022 + PB1D9 SINE Alu 14 120 0 4 1140 1186 201 127 29 chr13 72805304 72805459 -47478853 + ORR1D1 LTR MaLR 1 176 -198 4 1140 549 0 0 0 chr13 72805459 72805520 -47478792 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1140 1186 201 127 29 chr13 72805520 72805671 -47478641 + ORR1D1 LTR MaLR 177 337 -37 4 1140 483 213 35 53 chr13 72805660 72805774 -47478538 - MTEa LTR MaLR -267 112 1 4 1140 429 287 85 0 chr13 72806340 72806469 -47477843 - Lx8 LINE L1 -592 6881 6742 4 1140 278 362 17 25 chr13 72809826 72809945 -47474367 - LFSINE_Vert SINE SINE -298 161 44 4 1140 256 277 68 43 chr13 72810686 72810803 -47473509 + MIRm SINE MIR 139 258 -18 4 1140 1755 138 109 6 chr13 72813133 72813446 -47470866 - ORR1B1 LTR MaLR -9 385 41 4 1140 1675 235 22 3 chr13 72813786 72814144 -47470168 - ORR1D2 LTR MaLR -5 365 1 4 1140 195 69 0 0 chr13 72814413 72814442 -47469870 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1140 347 0 0 23 chr13 72814735 72814779 -47469533 + (TAA)n Simple_repeat Simple_repeat 3 45 0 4 1140 38342 17 6 7 chr13 72814781 72820370 -47463942 + L1Md_A LINE L1 7 5586 -297 4 1140 8979 13 0 1 chr13 72820370 72821367 -47462945 + L1Md_A LINE L1 5587 6582 0 4 1140 260 313 203 5 chr13 72821467 72821679 -47462633 - MLT2B3 LTR ERVL -1 553 300 4 1140 1518 234 27 49 chr13 72821776 72822145 -47462167 - MTEb LTR MaLR -18 361 1 4 1140 435 19 0 0 chr13 72822189 72822241 -47462071 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1140 420 252 117 8 chr13 72824414 72824542 -47459770 + B1F1 SINE Alu 6 147 -2 4 1140 778 263 15 10 chr13 72825264 72825280 -47459032 - B3A SINE B2 -1 197 182 4 1140 396 0 0 0 chr13 72825280 72825324 -47458988 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1140 504 0 0 0 chr13 72825324 72825379 -47458933 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 1140 778 263 15 10 chr13 72825379 72825557 -47458755 - B3A SINE B2 -17 181 2 4 1140 226 346 51 14 chr13 72825584 72825722 -47458590 - MLT1C LTR MaLR -9 458 316 4 1140 465 66 0 0 chr13 72825857 72825918 -47458394 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1140 231 203 0 0 chr13 72825917 72825986 -47458326 + (TG)n Simple_repeat Simple_repeat 2 70 0 4 1140 416 216 0 7 chr13 72825985 72826134 -47458178 + CT-rich Low_complexity Low_complexity 1 148 0 4 1140 191 36 36 0 chr13 72827181 72827209 -47457103 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 4 1140 1118 274 61 14 chr13 72827448 72827810 -47456502 + MTEa LTR MaLR 1 379 0 4 1140 543 307 140 55 chr13 72828228 72828908 -47455404 - MLT1C-int LTR MaLR -472 1017 80 4 1140 225 0 0 0 chr13 72829577 72829602 -47454710 + (C)n Simple_repeat Simple_repeat 1 25 0 4 1140 752 144 52 15 chr13 72832314 72832448 -47451864 + B1_Mur4 SINE Alu 10 148 -2 4 1140 242 263 9 116 chr13 72832643 72832755 -47451557 + MT2B LTR ERVL 152 251 -350 4 1140 434 312 9 0 chr13 72832666 72832775 -47451537 + PB1D10 SINE Alu 7 116 -1 4 1140 345 197 41 27 chr13 72833189 72833262 -47451050 - HAL1-3A_ME LINE L1 -809 2049 1976 4 1140 218 260 0 8 chr13 72833265 72833393 -47450919 + (TG)n Simple_repeat Simple_repeat 2 128 0 4 1140 399 252 0 0 chr13 72833434 72833593 -47450719 + (TG)n Simple_repeat Simple_repeat 2 160 0 4 1140 282 205 0 0 chr13 72833620 72833703 -47450609 + (TG)n Simple_repeat Simple_repeat 1 83 0 4 1140 500 293 148 42 chr13 72833715 72833979 -47450333 - B4A SINE B4 0 292 1 4 1140 221 0 35 0 chr13 72835528 72835557 -47448755 + (TC)n Simple_repeat Simple_repeat 1 30 0 4 1140 180 0 0 0 chr13 72835557 72835576 -47448736 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1140 254 26 0 50 chr13 72835582 72835622 -47448690 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 4 1140 828 305 134 8 chr13 72836815 72837387 -47446925 + L1MB4 LINE L1 5265 5914 -266 4 1140 2144 104 49 29 chr13 72837426 72837772 -47446540 + MTB LTR MaLR 47 399 -1 4 1140 502 249 12 0 chr13 72838123 72838296 -47446016 + (TG)n Simple_repeat Simple_repeat 1 175 0 4 1140 450 99 0 53 chr13 72838303 72838378 -47445934 - 4.5SRNA scRNA scRNA -1 93 23 4 1140 1035 159 11 11 chr13 72838388 72838566 -47445746 + B2_Mm1t SINE B2 2 179 -14 4 1140 319 95 0 0 chr13 72838582 72838624 -47445688 + B2_Mm2 SINE B2 50 91 -104 4 1140 371 273 81 24 chr13 72838630 72838754 -47445558 - ORR1E LTR MaLR -218 141 11 4 1140 1867 194 26 14 chr13 72838796 72839146 -47445166 - ORR1B1 LTR MaLR 0 394 41 4 1140 915 257 5 23 chr13 72839566 72839785 -47444527 + B3 SINE B2 2 216 0 4 1140 419 231 92 69 chr13 72839838 72839968 -47444344 + B3A SINE B2 1 133 -65 4 1140 778 316 58 61 chr13 72840759 72841119 -47443193 + ORR1E LTR MaLR 1 359 0 4 1140 1899 199 58 3 chr13 72841482 72841862 -47442450 - MTD LTR MaLR -12 407 18 4 1140 198 0 0 0 chr13 72841865 72841887 -47442425 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 1140 661 246 75 16 chr13 72842047 72842233 -47442079 - B3A SINE B2 0 198 2 4 1140 234 0 0 0 chr13 72843857 72843883 -47440429 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 4 1140 423 209 0 0 chr13 72843886 72843996 -47440316 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 1140 729 244 57 28 chr13 72843996 72844173 -47440139 - B3A SINE B2 -16 182 1 4 1140 351 212 23 70 chr13 72844259 72844345 -47439967 - ID4 SINE ID 0 83 2 4 1140 236 200 165 72 chr13 72844355 72844452 -47439860 - PB1 SINE Alu 0 127 22 4 1140 288 130 0 0 chr13 72845362 72845408 -47438904 + (GGA)n Simple_repeat Simple_repeat 1 46 0 4 1140 966 207 222 23 chr13 72846397 72846543 -47437769 + RMER17C LTR ERVK 1 214 -196 4 1140 564 62 0 0 chr13 72846543 72846624 -47437688 + (TC)n Simple_repeat Simple_repeat 2 82 0 4 1140 225 0 0 0 chr13 72846624 72846648 -47437664 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1140 966 207 222 23 chr13 72846648 72846842 -47437470 + RMER17C LTR ERVK 215 409 -1 4 1140 486 0 0 0 chr13 72849246 72849300 -47435012 + (GA)n Simple_repeat Simple_repeat 1 54 0 4 1140 268 281 0 58 chr13 72850166 72850253 -47434059 + (CA)n Simple_repeat Simple_repeat 2 83 0 4 1140 218 192 19 0 chr13 72850257 72850309 -47434003 + (CATA)n Simple_repeat Simple_repeat 4 56 0 4 1140 300 70 0 0 chr13 72850335 72850378 -47433934 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1140 602 298 138 20 chr13 72851654 72851907 -47432405 + B4 SINE B4 2 284 -8 4 1140 438 20 0 0 chr13 72851916 72851967 -47432345 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1140 1073 50 7 0 chr13 72853146 72853286 -47431026 + (GA)n Simple_repeat Simple_repeat 1 141 0 4 1140 1775 247 90 8 chr13 72854333 72854855 -47429457 - RCHARR1 DNA MER1_type 0 974 410 4 1140 1071 251 108 22 chr13 72854854 72855161 -47429151 + MTE2b LTR MaLR 29 415 -6 4 1140 1038 245 45 62 chr13 72855181 72855473 -47428839 - RCHARR1 DNA MER1_type -559 415 129 4 1140 743 105 113 0 chr13 72855473 72855597 -47428715 - L1_Mus2 LINE L1 0 6566 6429 4 1140 6699 65 12 10 chr13 72855597 72856593 -47427719 + L1_Mus2 LINE L1 5432 6430 -136 4 1140 366 302 138 0 chr13 72856593 72856709 -47427603 - RCHARR1 DNA MER1_type -842 132 1 4 1140 692 177 0 12 chr13 72856927 72857093 -47427219 + CT-rich Low_complexity Low_complexity 3 166 0 4 1140 800 227 146 0 chr13 72857614 72857799 -47426513 - B3 SINE B2 -3 213 2 4 1140 569 290 7 0 chr13 72857812 72857950 -47426362 - B1F1 SINE Alu -5 144 6 4 1140 4801 196 63 13 chr13 72857995 72858836 -47425476 + RMER1A Other Other 30 871 -159 4 1140 345 24 0 0 chr13 72858836 72858878 -47425434 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1140 4801 196 63 13 chr13 72858878 72858982 -47425330 + RMER1A Other Other 872 1022 -8 4 1140 472 68 14 14 chr13 72859865 72859939 -47424373 + (TCTA)n Simple_repeat Simple_repeat 2 75 0 4 1140 724 74 61 12 chr13 72859983 72860148 -47424164 + (TCTA)n Simple_repeat Simple_repeat 3 175 0 4 1140 432 0 0 0 chr13 72862018 72862066 -47422246 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1140 23 33 0 0 chr13 72862250 72862280 -47422032 + AT_rich Low_complexity Low_complexity 1 30 0 4 1140 363 23 0 0 chr13 72862337 72862381 -47421931 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1140 225 146 0 0 chr13 72863999 72864047 -47420265 + (A)n Simple_repeat Simple_repeat 1 48 0 4 1140 180 298 124 31 chr13 72865181 72865278 -47419034 + L3 LINE CR1 3947 4052 -437 4 1140 423 0 0 0 chr13 72866420 72866467 -47417845 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1140 2425 189 108 7 chr13 72867518 72868103 -47416209 + Lx9 LINE L1 7001 7644 0 4 1140 406 292 80 0 chr13 72868115 72868228 -47416084 + B1F SINE Alu 7 128 -21 4 1140 239 374 56 81 chr13 72868439 72868698 -47415614 + B4A SINE B4 15 269 -23 4 1140 252 0 0 0 chr13 72868698 72868726 -47415586 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1140 239 374 56 81 chr13 72868726 72868751 -47415561 + B4A SINE B4 270 292 0 4 1140 1630 62 0 0 chr13 72872039 72872250 -47412062 - L1Md_F2 LINE L1 -2 6580 6370 4 1140 4080 57 0 0 chr13 72872250 72872740 -47411572 + L1Md_F2 LINE L1 5884 6373 -209 4 1140 189 311 0 16 chr13 72873034 72873096 -47411216 + MIR SINE MIR 154 214 -48 4 1140 255 125 0 0 chr13 72873792 72873832 -47410480 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1140 497 242 0 40 chr13 72875074 72875199 -47409113 - PB1D9 SINE Alu 0 120 1 4 1141 1386 232 78 20 chr13 72877652 72878000 -47406312 + Lx5 LINE L1 6683 7050 0 4 1141 272 328 57 32 chr13 72878018 72878141 -47406171 + Charlie1 DNA MER1_type 84 209 -2572 4 1141 1101 259 44 122 chr13 72878829 72878870 -47405442 - MTE2a LTR MaLR -2 377 336 4 1141 2502 89 3 0 chr13 72878870 72879196 -47405116 + ORR1A2 LTR MaLR 1 327 0 4 1141 1101 259 44 122 chr13 72879196 72879563 -47404749 - MTE2a LTR MaLR -44 335 1 4 1141 363 295 64 7 chr13 72880312 72880452 -47403860 - B1F SINE Alu 0 149 2 4 1141 187 128 51 0 chr13 72880508 72880547 -47403765 - L3 LINE CR1 -2090 2399 2359 4 1141 1007 316 67 82 chr13 72880915 72881659 -47402653 + RMER19B LTR ERVK 12 878 -24 4 1141 206 0 69 0 chr13 72882622 72882651 -47401661 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1141 252 0 0 0 chr13 72883103 72883131 -47401181 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1141 748 278 5 20 chr13 72883230 72883428 -47400884 + B3 SINE B2 5 199 -17 4 1141 405 0 0 0 chr13 72883870 72883915 -47400397 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 1141 297 0 0 0 chr13 72883915 72883947 -47400365 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1141 633 61 0 0 chr13 72885844 72885926 -47398386 + (GAAA)n Simple_repeat Simple_repeat 3 84 0 5 1141 342 318 69 25 chr13 72886892 72887095 -47397217 - MLT1B LTR MaLR -176 214 3 5 1141 382 260 30 0 chr13 72887483 72887583 -47396729 + LTR82A LTR ERVL 225 327 -545 5 1141 432 0 0 0 chr13 72887643 72887691 -47396621 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1141 271 340 79 13 chr13 72887867 72888019 -47396293 - MLT2C2 LTR ERVL -20 539 378 5 1141 719 289 54 15 chr13 72888384 72888644 -47395668 + LTR82A LTR ERVL 598 867 -5 5 1141 4207 54 31 9 chr13 72889164 72889706 -47394606 - L1Md_F2 LINE L1 -2 6580 6027 5 1141 2164 46 0 0 chr13 72889706 72889966 -47394346 + L1Md_F2 LINE L1 5760 6019 -563 5 1141 475 90 26 0 chr13 72890145 72890223 -47394089 + (GA)n Simple_repeat Simple_repeat 2 81 0 5 1141 339 220 35 30 chr13 72890223 72890430 -47393882 + GA-rich Low_complexity Low_complexity 1 208 0 5 1141 274 109 0 21 chr13 72890286 72890333 -47393979 + (GA)n Simple_repeat Simple_repeat 2 47 0 5 1141 270 175 31 16 chr13 72890906 72890970 -47393342 - MTE2b LTR MaLR -11 368 304 5 1141 757 189 78 90 chr13 72891007 72891321 -47392991 + RLTRETN_Mm LTR ERVK 40 408 -1 5 1141 954 268 72 11 chr13 72891321 72891593 -47392719 - MTE2b LTR MaLR -85 294 6 5 1141 201 279 0 0 chr13 72891737 72891805 -47392507 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 1141 498 267 112 0 chr13 72892026 72892174 -47392138 + MTEa LTR MaLR 3 165 -214 5 1141 370 279 125 15 chr13 72895125 72895325 -47388987 - L1MB3 LINE L1 -103 6080 5859 5 1141 948 296 86 46 chr13 72895468 72896446 -47387866 - L1MA6 LINE L1 -282 6018 4921 5 1141 308 256 208 48 chr13 72896461 72896629 -47387683 + MTD LTR MaLR 133 327 -92 5 1141 389 284 42 66 chr13 72896643 72896809 -47387503 - L1MA6 LINE L1 -1198 4945 4784 5 1141 2134 76 30 0 chr13 72896809 72897112 -47387200 - MTB_Mm LTR MaLR -91 316 5 5 1141 365 42 0 0 chr13 72897128 72897176 -47387136 - HAL1-3A_ME LINE L1 -835 2023 1976 5 1141 183 42 0 0 chr13 72897176 72897200 -47387112 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1141 550 164 0 22 chr13 72897195 72897376 -47386936 + (TCTCTG)n Simple_repeat Simple_repeat 2 178 0 5 1141 204 217 0 0 chr13 72897365 72897411 -47386901 + CT-rich Low_complexity Low_complexity 3 48 0 5 1141 447 19 0 0 chr13 72897411 72897463 -47386849 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1141 704 299 62 16 chr13 72897467 72897725 -47386587 - B4 SINE B4 -20 272 3 5 1141 25 31 0 0 chr13 72897731 72897763 -47386549 + AT_rich Low_complexity Low_complexity 1 32 0 5 1141 779 267 132 53 chr13 72898296 72898636 -47385676 + ORR1D2 LTR MaLR 4 370 0 5 1141 656 282 73 51 chr13 72898758 72899082 -47385230 - ORR1E LTR MaLR 0 379 25 5 1141 200 330 10 10 chr13 72899404 72899508 -47384804 + (CA)n Simple_repeat Simple_repeat 2 105 0 5 1141 1875 185 117 8 chr13 72899957 72900333 -47383979 - MTC LTR MaLR 0 421 5 5 1141 2528 169 49 61 chr13 72901465 72902038 -47382274 + RMER2 LTR ERV1 2 567 0 5 1141 429 95 0 0 chr13 72904118 72904181 -47380131 + (TG)n Simple_repeat Simple_repeat 1 63 0 5 1141 354 331 8 8 chr13 72905098 72905232 -47379080 + GA-rich Low_complexity Low_complexity 2 135 0 5 1141 216 0 0 0 chr13 72905402 72905426 -47378886 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1141 236 247 75 53 chr13 72906784 72906878 -47377434 - AmnSINE1 SINE SINE -399 176 81 5 1141 212 235 0 14 chr13 72907102 72907171 -47377141 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 1141 224 301 13 19 chr13 72907183 72907370 -47376942 + (TCTG)n Simple_repeat Simple_repeat 1 185 0 5 1141 366 258 19 19 chr13 72907330 72907492 -47376820 + (TG)n Simple_repeat Simple_repeat 1 162 0 5 1141 584 168 0 7 chr13 72907511 72907661 -47376651 + (TG)n Simple_repeat Simple_repeat 2 150 0 5 1141 497 239 90 42 chr13 72907892 72908036 -47376276 + RSINE1 SINE B4 15 165 0 5 1141 1796 228 188 17 chr13 72908354 72908876 -47375436 + RMER19C LTR ERVK 1 611 0 5 1141 794 264 106 72 chr13 72909510 72910382 -47373930 - L1M2 LINE L1 -2180 4665 3768 5 1141 423 0 0 0 chr13 72910382 72910429 -47373883 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1141 785 299 111 91 chr13 72910429 72910664 -47373648 - L1M2 LINE L1 -3078 3767 3485 5 1141 945 210 53 14 chr13 72910664 72910872 -47373440 + B3 SINE B2 1 216 0 5 1141 785 299 111 91 chr13 72910872 72911109 -47373203 - L1M2 LINE L1 -3361 3484 3285 5 1141 1110 96 0 0 chr13 72911109 72911255 -47373057 - B1_Mus1 SINE Alu 0 148 3 5 1141 785 273 98 100 chr13 72911255 72911773 -47372539 - L1M2 LINE L1 -3561 3284 2771 5 1141 676 318 54 68 chr13 72911869 72912503 -47371809 - L1M2 LINE L1 -4298 2551 1938 5 1141 1648 182 141 19 chr13 72912503 72912878 -47371434 + MTC LTR MaLR 1 421 0 5 1141 676 318 54 68 chr13 72912878 72913042 -47371270 - L1M2 LINE L1 -4912 1937 1764 5 1141 1251 116 0 36 chr13 72913140 72913336 -47370976 - B2_Mm2 SINE B2 -5 190 2 5 1141 560 278 55 60 chr13 72913432 72913472 -47370840 - B3A SINE B2 0 198 166 5 1141 387 0 0 0 chr13 72913472 72913515 -47370797 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1141 560 278 55 60 chr13 72913515 72913673 -47370639 - B3A SINE B2 -33 165 1 5 1141 3487 28 2 2 chr13 72914148 72914544 -47369768 - MTA_Mm LTR MaLR 0 396 1 5 1141 24 0 0 0 chr13 72914567 72914591 -47369721 + AT_rich Low_complexity Low_complexity 1 24 0 5 1141 606 140 0 0 chr13 72914760 72914860 -47369452 + (TTTC)n Simple_repeat Simple_repeat 3 102 0 5 1141 2015 113 3 29 chr13 72915080 72915389 -47368923 - L1_Mus4 LINE L1 -18 6618 6318 5 1141 1629 219 75 16 chr13 72915408 72915792 -47368520 - Lx2B LINE L1 -12 6988 6582 5 1141 299 242 30 6 chr13 72916832 72916998 -47367314 + (TTCA)n Simple_repeat Simple_repeat 4 173 0 5 1141 432 0 0 0 chr13 72917834 72917882 -47366430 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1141 390 175 0 0 chr13 72919442 72919522 -47364790 + CT-rich Low_complexity Low_complexity 1 80 0 5 1141 932 160 0 0 chr13 72919523 72919673 -47364639 - B1_Mur4 SINE Alu 0 150 1 5 1141 2102 118 42 0 chr13 72924273 72924586 -47359726 + ORR1A3 LTR MaLR 1 326 0 5 1141 1702 26 0 0 chr13 72924765 72924955 -47359357 - B2_Mm1a SINE B2 -3 190 1 5 1141 501 17 0 0 chr13 72924983 72925041 -47359271 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1141 290 221 57 23 chr13 72925128 72925216 -47359096 + ORR1E LTR MaLR 269 359 0 5 1141 229 294 71 38 chr13 72927060 72927244 -47357068 + L1MA4 LINE L1 5832 6021 -282 5 1141 230 284 24 12 chr13 72927249 72927331 -47356981 + L1MA4 LINE L1 6210 6292 -8 5 1141 968 244 56 99 chr13 72927977 72928372 -47355940 - MTE2a LTR MaLR 0 379 2 5 1141 783 216 168 0 chr13 72929165 72929350 -47354962 - B3 SINE B2 0 216 1 5 1141 478 254 148 45 chr13 72929649 72929851 -47354461 - MTD LTR MaLR -196 223 1 5 1141 765 180 36 0 chr13 72931120 72931259 -47353053 + B1_Mus1 SINE Alu 4 147 -1 5 1141 198 103 0 0 chr13 72931416 72931445 -47352867 + (CAA)n Simple_repeat Simple_repeat 3 31 0 5 1141 1341 21 47 6 chr13 72931714 72932055 -47352257 + (CAGAGA)n Simple_repeat Simple_repeat 1 354 0 5 1141 1188 244 59 38 chr13 72933928 72934371 -47349941 - RCHARR1 DNA MER1_type 0 974 523 5 1141 548 261 41 77 chr13 72935255 72935425 -47348887 + RSINE1 SINE B4 2 165 0 5 1141 262 43 42 21 chr13 72935598 72935646 -47348666 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 5 1141 237 197 0 0 chr13 72935961 72936032 -47348280 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1141 231 103 0 0 chr13 72936060 72936099 -47348213 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 5 1141 366 179 0 0 chr13 72936102 72936197 -47348115 + (TG)n Simple_repeat Simple_repeat 2 96 0 5 1141 543 125 0 0 chr13 72936204 72936308 -47348004 + (TC)n Simple_repeat Simple_repeat 1 104 0 5 1141 351 0 0 0 chr13 72936308 72936347 -47347965 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1141 413 294 18 0 chr13 72936347 72936456 -47347856 - B3A SINE B2 -86 112 2 5 1141 292 22 44 0 chr13 72936875 72936920 -47347392 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1141 1015 271 115 38 chr13 72937057 72937458 -47346854 - RCHARR1 DNA MER1_type -542 432 1 5 1141 321 135 0 0 chr13 72937855 72937907 -47346405 + (A)n Simple_repeat Simple_repeat 1 52 0 5 1141 21 36 0 0 chr13 72938639 72938667 -47345645 + AT_rich Low_complexity Low_complexity 1 28 0 5 1141 1088 119 6 0 chr13 72941382 72941559 -47342753 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 5 1141 823 284 102 12 chr13 72943339 72943663 -47340649 - MTEa LTR MaLR -26 353 1 5 1141 456 341 70 20 chr13 72944431 72944877 -47339435 - L1ME1 LINE L1 -177 6002 5535 5 1141 331 119 30 0 chr13 72945043 72945110 -47339202 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 5 1141 694 196 32 75 chr13 72945111 72945299 -47339013 - B3A SINE B2 -5 193 14 5 1141 2884 79 42 3 chr13 72945440 72945821 -47338491 + MTA_Mm LTR MaLR 1 396 0 5 1141 242 279 25 0 chr13 72946652 72946731 -47337581 + (TCTCTG)n Simple_repeat Simple_repeat 2 82 0 5 1141 1270 246 82 42 chr13 72947086 72947417 -47336895 - ORR1D2 LTR MaLR -6 364 21 5 1141 677 302 15 5 chr13 72948463 72948659 -47335653 + B4 SINE B4 81 278 -14 5 1141 243 0 0 0 chr13 72948704 72948731 -47335581 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 5 1141 654 275 0 0 chr13 72948740 72948882 -47335430 - B1_Mur1 SINE Alu -7 142 1 5 1141 544 101 62 22 chr13 72950440 72950714 -47333598 + (TAGA)n Simple_repeat Simple_repeat 1 284 0 5 1141 1282 183 233 3 chr13 72950967 72951268 -47333044 - ORR1D1 LTR MaLR -2 372 3 5 1141 518 247 49 93 chr13 72951386 72951414 -47332898 + MTEa LTR MaLR 167 198 -181 5 1141 264 30 0 0 chr13 72951414 72951447 -47332865 + (TCTCTG)n Simple_repeat Simple_repeat 2 34 0 5 1141 518 247 49 93 chr13 72951447 72951623 -47332689 + MTEa LTR MaLR 199 361 -18 5 1141 258 32 0 0 chr13 72952952 72952983 -47331329 + (TCCCC)n Simple_repeat Simple_repeat 1 31 0 5 1141 249 161 0 33 chr13 72956090 72956180 -47328132 + (TTTG)n Simple_repeat Simple_repeat 2 88 0 5 1141 953 144 20 0 chr13 72956189 72956335 -47327977 - B1_Mur3 SINE Alu 0 149 1 5 1141 280 287 151 13 chr13 72956380 72956532 -47327780 + MLT1H1 LTR MaLR 275 447 -108 5 1141 384 22 0 0 chr13 72956953 72956998 -47327314 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1141 1031 281 38 38 chr13 72958431 72958572 -47325740 - Lx6 LINE L1 0 7460 7321 5 1141 711 0 0 0 chr13 72958572 72958651 -47325661 + (GAA)n Simple_repeat Simple_repeat 2 80 0 6 1141 1031 281 38 38 chr13 72958651 72958827 -47325485 - Lx6 LINE L1 -140 7320 7143 5 1141 880 158 6 6 chr13 72960331 72960350 -47323962 + polypyrimidine Low_complexity Low_complexity 158 176 0 6 1141 1138 96 0 17 chr13 72960350 72960531 -47323781 + (TTCTC)n Simple_repeat Simple_repeat 3 180 0 6 1141 880 158 6 6 chr13 72960531 72960683 -47323629 + CT-rich Low_complexity Low_complexity 5 157 0 6 1141 252 383 100 6 chr13 72960850 72961199 -47323113 + MER82 DNA MER2_type 45 426 -227 6 1141 234 0 0 0 chr13 72961451 72961477 -47322835 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 6 1141 267 289 0 24 chr13 72961516 72961601 -47322711 + (TCCA)n Simple_repeat Simple_repeat 3 85 0 6 1141 280 138 15 15 chr13 72961614 72961680 -47322632 + (TTCA)n Simple_repeat Simple_repeat 4 69 0 6 1141 312 27 0 0 chr13 72961804 72961841 -47322471 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 6 1141 325 224 39 13 chr13 72963408 72963485 -47320827 - PB1D7 SINE Alu -21 99 21 6 1141 186 43 0 0 chr13 72963496 72963519 -47320793 + (CCCTAA)n Simple_repeat Simple_repeat 3 25 0 6 1141 1240 152 31 44 chr13 72969729 72969956 -47314356 + URR1A DNA MER1_type 1 224 -2 6 1141 700 313 18 14 chr13 72973382 72973599 -47310713 + B4 SINE B4 33 250 -42 6 1141 30 27 0 0 chr13 72973744 72973781 -47310531 + AT_rich Low_complexity Low_complexity 1 37 0 6 1141 700 241 87 43 chr13 72973781 72973989 -47310323 - ID_B1 SINE B4 -7 217 1 6 1141 1066 273 34 14 chr13 72975741 72976038 -47308274 + MTE2b LTR MaLR 1 303 -76 6 1141 629 25 13 0 chr13 72976969 72977048 -47307264 + (TTC)n Simple_repeat Simple_repeat 2 81 0 6 1141 268 224 30 0 chr13 72977302 72977369 -47306943 - RMER15 LTR ERVL -104 471 403 6 1141 521 235 108 44 chr13 72977442 72977691 -47306621 - Lx8 LINE L1 -272 7201 6937 6 1141 321 343 78 70 chr13 72978582 72978852 -47305460 + MLT1A LTR MaLR 1 264 -110 6 1141 2793 109 33 8 chr13 72978852 72979249 -47305063 - MTB_Mm LTR MaLR 0 407 1 6 1141 321 343 78 70 chr13 72979249 72979348 -47304964 + MLT1A LTR MaLR 265 372 -2 6 1141 604 240 20 33 chr13 72979765 72979916 -47304396 - B1_Mur2 SINE Alu 0 149 1 6 1141 453 275 83 79 chr13 72980561 72980814 -47303498 - MTE2a LTR MaLR -17 362 109 6 1141 181 165 41 10 chr13 72980829 72980927 -47303385 + (TA)n Simple_repeat Simple_repeat 1 101 0 6 1141 340 267 49 16 chr13 72980953 72981075 -47303237 - MTE2a LTR MaLR -292 127 2 6 1141 2934 43 0 0 chr13 72981096 72981441 -47302871 + L1_Mus1 LINE L1 6217 6561 -6 6 1141 1020 96 0 0 chr13 72981455 72981601 -47302711 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 6 1141 484 333 15 92 chr13 72981608 72981869 -47302443 + B4A SINE B4 48 288 -4 6 1141 8353 38 1 4 chr13 72982210 72983493 -47300819 - L1Md_F2 LINE L1 0 6582 5305 6 1141 389 348 19 6 chr13 72983527 72983686 -47300626 + RSINE1 SINE B4 5 165 0 6 1141 2135 181 235 18 chr13 72983718 72983875 -47300437 + RMER19A LTR ERVK 3 225 -512 6 1141 186 43 0 0 chr13 72983875 72983898 -47300414 + (CTCTG)n Simple_repeat Simple_repeat 5 27 0 6 1141 2135 181 235 18 chr13 72983898 72984247 -47300065 + RMER19A LTR ERVK 226 644 -93 6 1141 2380 90 186 8 chr13 72984247 72984617 -47299695 - RLTR10C LTR ERVK 0 436 1 6 1141 2135 181 235 18 chr13 72984617 72984713 -47299599 + RMER19A LTR ERVK 645 736 -1 6 1141 210 299 0 15 chr13 72985624 72985692 -47298620 + B3A SINE B2 6 72 -126 6 1141 303 28 0 0 chr13 72986359 72986395 -47297917 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1141 180 179 0 0 chr13 72987137 72987176 -47297136 + (CATG)n Simple_repeat Simple_repeat 4 42 0 6 1141 1150 332 101 19 chr13 72987768 72988521 -47295791 - Lx7 LINE L1 -4 7469 6567 6 1141 612 313 84 18 chr13 72988682 72989014 -47295298 - MLT1A LTR MaLR -16 358 5 6 1141 231 103 0 0 chr13 72989752 72989791 -47294521 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1141 26 74 0 0 chr13 72993245 72993299 -47291013 + AT_rich Low_complexity Low_complexity 1 54 0 6 1141 198 156 0 0 chr13 72993299 72993344 -47290968 + (TA)n Simple_repeat Simple_repeat 1 45 0 6 1141 3313 286 61 48 chr13 72993373 72993598 -47290714 - L1_Mur3 LINE L1 -2609 3271 3047 6 1141 1216 61 0 0 chr13 72993598 72993745 -47290567 - B1_Mus2 SINE Alu 0 147 1 6 1141 3313 286 61 48 chr13 72993745 72995357 -47288955 - L1_Mur3 LINE L1 -2834 3046 1411 6 1141 1183 253 63 0 chr13 72996545 72996861 -47287451 - MTEa LTR MaLR -4 375 40 6 1141 360 0 0 0 chr13 72996957 72996997 -47287315 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1141 198 71 0 0 chr13 72997954 72997982 -47286330 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 6 1141 241 309 85 30 chr13 72999267 72999467 -47284845 + MLT1A LTR MaLR 26 236 -138 6 1141 21 71 0 0 chr13 72999931 72999973 -47284339 + AT_rich Low_complexity Low_complexity 1 42 0 6 1141 788 164 0 13 chr13 73000598 73000752 -47283560 + GA-rich Low_complexity Low_complexity 2 153 0 1 1141 519 17 0 0 chr13 73001837 73001897 -47282415 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 1141 533 247 60 45 chr13 73004148 73004347 -47279965 + B4 SINE B4 4 205 -87 3 1141 1621 150 96 17 chr13 73004940 73005285 -47279027 + ORR1C2 LTR MaLR 1 372 -12 4 1141 1182 107 18 16 chr13 73005697 73005899 -47278413 - B2_Mm2 SINE B2 0 198 2 5 1141 507 59 0 0 chr13 73005899 73005960 -47278352 + tRNA-Lys-AAG tRNA tRNA 14 74 -2 6 1142 592 201 239 0 chr13 73007481 73007640 -47276672 - MTD LTR MaLR -5 414 218 7 1142 406 295 61 20 chr13 73007666 73007863 -47276449 - MLT1C LTR MaLR -226 241 37 8 1142 364 327 68 54 chr13 73007902 73008121 -47276191 + MER96B DNA hAT 44 267 -150 9 1142 339 309 56 21 chr13 73008121 73008263 -47276049 + B1F2 SINE Alu 3 149 0 1 1142 364 327 68 54 chr13 73008263 73008412 -47275900 + MER96B DNA hAT 268 417 0 9 1142 220 316 5 75 chr13 73008613 73008801 -47275511 + (CATATA)n Simple_repeat Simple_repeat 5 179 0 1 1142 522 287 66 108 chr13 73010030 73010335 -47273977 - B4 SINE B4 0 292 1 1 1142 231 266 11 0 chr13 73010336 73010430 -47273882 + (TA)n Simple_repeat Simple_repeat 2 96 0 1 1142 210 71 0 0 chr13 73012243 73012271 -47272041 + (CTG)n Simple_repeat Simple_repeat 3 30 0 1 1142 465 66 0 0 chr13 73012542 73012603 -47271709 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1142 253 287 119 0 chr13 73013846 73013947 -47270365 - L2b LINE L2 -8 3367 3255 1 1142 28 29 0 0 chr13 73014032 73014067 -47270245 + AT_rich Low_complexity Low_complexity 1 35 0 1 1142 603 87 19 9 chr13 73014309 73014414 -47269898 + (TC)n Simple_repeat Simple_repeat 2 107 0 1 1142 1383 228 102 3 chr13 73014450 73014793 -47269519 + MTD LTR MaLR 20 396 -23 1 1142 501 297 113 26 chr13 73015040 73015306 -47269006 - Lx8 LINE L1 -34 7439 7151 2 1142 234 190 0 49 chr13 73015945 73016006 -47268306 + (CATATA)n Simple_repeat Simple_repeat 6 63 0 2 1142 362 209 21 7 chr13 73016008 73016148 -47268164 + (CA)n Simple_repeat Simple_repeat 1 142 0 2 1142 365 214 17 51 chr13 73016149 73016267 -47268045 + (CATA)n Simple_repeat Simple_repeat 3 116 0 2 1142 279 79 0 0 chr13 73016267 73016305 -47268007 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1142 230 326 0 61 chr13 73016586 73016684 -47267628 - MTEa LTR MaLR -286 93 2 2 1142 732 233 37 37 chr13 73016876 73017090 -47267222 + B3 SINE B2 3 216 0 2 1142 246 345 18 0 chr13 73017613 73017726 -47266586 + MER58A DNA MER1_type 3 117 -107 2 1142 395 291 59 7 chr13 73018587 73018722 -47265590 + MER95 LTR ERV 190 331 -100 2 1142 768 230 219 13 chr13 73020362 73020599 -47263713 + MTEa LTR MaLR 5 290 -89 2 1142 1459 228 2 99 chr13 73020599 73021033 -47263279 - RMER19C LTR ERVK 0 611 220 3 1142 1101 209 7 101 chr13 73021049 73021357 -47262955 - RMER19C LTR ERVK -332 279 1 3 1142 262 241 165 0 chr13 73021363 73021442 -47262870 + MTEa LTR MaLR 288 379 0 2 1142 3162 60 5 2 chr13 73023343 73023742 -47260570 - MTB LTR MaLR 0 400 1 3 1142 267 370 7 7 chr13 73023896 73024043 -47260269 + CT-rich Low_complexity Low_complexity 2 148 0 3 1142 209 222 16 0 chr13 73024685 73024748 -47259564 + CT-rich Low_complexity Low_complexity 6 69 0 3 1142 704 300 19 30 chr13 73024771 73025034 -47259278 + RCHARR1 DNA MER1_type 168 427 -547 3 1142 1247 229 126 14 chr13 73025034 73025384 -47258928 - MTD LTR MaLR 0 419 31 3 1142 988 231 82 39 chr13 73025404 73025710 -47258602 + RCHARR1 DNA MER1_type 424 742 -232 3 1142 402 21 0 0 chr13 73025734 73025781 -47258531 + (CATA)n Simple_repeat Simple_repeat 2 48 0 3 1142 326 271 34 8 chr13 73025781 73025900 -47258412 + RCHARR1 DNA MER1_type 818 939 -35 3 1142 711 201 0 0 chr13 73027800 73027964 -47256348 + (TA)n Simple_repeat Simple_repeat 1 164 0 3 1142 447 202 0 11 chr13 73028347 73028437 -47255875 - MTC LTR MaLR -26 395 307 3 1142 834 202 6 6 chr13 73028432 73028611 -47255701 - MTC LTR MaLR -229 192 14 3 1142 379 323 6 25 chr13 73028639 73028798 -47255514 - HAL1-2a_MD LINE L1 -524 2500 2345 4 1142 191 170 0 21 chr13 73028802 73028850 -47255462 + (ATGGTG)n Simple_repeat Simple_repeat 4 50 0 4 1142 644 284 108 10 chr13 73030092 73030387 -47253925 + Lx8 LINE L1 6933 7256 -217 4 1142 471 167 18 9 chr13 73030577 73030686 -47253626 - Lx2 LINE L1 -14 6983 6874 4 1142 219 139 0 0 chr13 73032457 73032493 -47251819 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1142 315 0 0 0 chr13 73033133 73033168 -47251144 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1142 279 0 0 0 chr13 73035601 73035632 -47248680 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1142 222 134 45 0 chr13 73036307 73036374 -47247938 + (TCTCTG)n Simple_repeat Simple_repeat 2 71 0 4 1142 450 53 0 0 chr13 73036545 73036602 -47247710 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1142 3223 259 72 57 chr13 73036604 73037802 -47246510 - L1_Mur3 LINE L1 -629 5251 4036 4 1142 456 279 28 14 chr13 73037803 73037945 -47246367 + Lx8 LINE L1 5775 5918 -1555 5 1142 389 356 37 6 chr13 73038133 73038297 -47246015 + Lx8 LINE L1 7184 7352 -121 5 1142 21 36 0 0 chr13 73039200 73039228 -47245084 + AT_rich Low_complexity Low_complexity 1 28 0 5 1142 612 0 0 0 chr13 73039710 73039778 -47244534 + (GA)n Simple_repeat Simple_repeat 2 69 0 5 1142 348 43 0 0 chr13 73041971 73042017 -47242295 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 1142 1298 208 162 12 chr13 73042017 73042362 -47241950 - MTD LTR MaLR -20 399 3 5 1142 2204 48 0 0 chr13 73043904 73044176 -47240136 - L1_Mus1 LINE L1 -608 5959 5688 5 1142 5275 51 3 6 chr13 73044176 73044830 -47239482 + L1_Mus1 LINE L1 5915 6566 -1 5 1142 677 153 0 6 chr13 73044830 73045007 -47239305 + GA-rich Low_complexity Low_complexity 1 176 0 5 1142 419 152 0 12 chr13 73047401 73047481 -47236831 + GA-rich Low_complexity Low_complexity 3 81 0 5 1142 186 43 0 0 chr13 73047959 73047982 -47236330 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 5 1142 785 246 10 25 chr13 73048593 73048793 -47235519 + B3A SINE B2 2 198 0 6 1142 1172 61 0 7 chr13 73049805 73049953 -47234359 + B1_Mus1 SINE Alu 1 147 -1 6 1142 315 0 0 0 chr13 73049956 73049991 -47234321 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 6 1142 954 65 7 54 chr13 73050110 73050257 -47234055 - L1_Mus2 LINE L1 -1 6565 6426 6 1142 25 31 0 0 chr13 73050309 73050341 -47233971 + AT_rich Low_complexity Low_complexity 1 32 0 6 1142 269 330 29 7 chr13 73050955 73051043 -47233269 + L2a LINE L2 3242 3376 -50 6 1142 740 269 0 56 chr13 73051583 73051780 -47232532 + Lx9 LINE L1 6864 7049 -595 6 1142 294 275 58 7 chr13 73051824 73051963 -47232349 + L1MD LINE L1 2348 2493 -3653 6 1142 588 311 102 3 chr13 73052548 73052851 -47231461 - L1M3 LINE L1 -349 5819 5487 6 1142 216 97 0 0 chr13 73052868 73052899 -47231413 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 6 1142 500 272 0 11 chr13 73052917 73053099 -47231213 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1142 666 239 0 0 chr13 73053141 73053317 -47230995 + (TG)n Simple_repeat Simple_repeat 1 176 0 7 1142 358 248 148 35 chr13 73053317 73053459 -47230853 - RSINE1 SINE B4 0 165 8 7 1142 416 280 37 165 chr13 73053476 73053549 -47230763 - ID_B1 SINE B4 -1 223 162 7 1142 1227 48 0 0 chr13 73053549 73053695 -47230617 + B1_Mus2 SINE Alu 2 147 0 7 1142 416 280 37 165 chr13 73053695 73053839 -47230473 - ID_B1 SINE B4 -63 161 34 7 1142 527 238 7 0 chr13 73054128 73054279 -47230033 + (TG)n Simple_repeat Simple_repeat 2 153 0 7 1142 363 259 0 0 chr13 73054279 73054391 -47229921 + (CA)n Simple_repeat Simple_repeat 2 113 0 7 1142 326 244 267 23 chr13 73055069 73055241 -47229071 - B3 SINE B2 0 216 3 7 1142 21 57 0 0 chr13 73055295 73055330 -47228982 + AT_rich Low_complexity Low_complexity 1 35 0 7 1142 267 299 82 27 chr13 73055372 73055482 -47228830 - MTEb LTR MaLR 0 379 264 7 1142 601 314 24 19 chr13 73055498 73055585 -47228727 - MTEb LTR MaLR -167 212 126 7 1142 2916 127 0 16 chr13 73055585 73056033 -47228279 + BGLII_B LTR ERVK 1 441 0 7 1142 601 314 24 19 chr13 73056033 73056156 -47228156 - MTEb LTR MaLR -254 125 1 7 1142 2071 302 66 14 chr13 73056156 73056874 -47227438 - MTE-int LTR MaLR -53 1527 772 8 1142 1328 146 8 24 chr13 73056863 73057109 -47227203 - RMER4B LTR ERVK -338 247 6 8 1142 444 82 0 0 chr13 73057109 73057170 -47227142 + (TG)n Simple_repeat Simple_repeat 1 61 0 8 1142 312 331 77 7 chr13 73057174 73057317 -47226995 - RSINE1 SINE B4 -10 155 3 8 1142 575 290 75 24 chr13 73057320 73057532 -47226780 - B4A SINE B4 -68 224 2 8 1142 717 236 80 10 chr13 73058856 73059057 -47225255 + B3 SINE B2 2 216 0 8 1142 643 249 26 122 chr13 73059872 73060142 -47224170 - MTE2b LTR MaLR -135 244 1 8 1142 1270 34 0 0 chr13 73061459 73061606 -47222706 + B1_Mus2 SINE Alu 1 147 0 8 1142 219 88 0 0 chr13 73061607 73061641 -47222671 + (A)n Simple_repeat Simple_repeat 1 34 0 8 1142 306 0 0 0 chr13 73061951 73061985 -47222327 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1142 461 32 16 0 chr13 73061985 73062047 -47222265 + (GA)n Simple_repeat Simple_repeat 1 64 0 9 1142 318 128 0 0 chr13 73062858 73062905 -47221407 - HAL1-3A_ME LINE L1 -836 2022 1976 9 1142 361 280 104 15 chr13 73062918 73063052 -47221260 - RSINE1 SINE B4 -2 163 18 9 1142 1351 143 9 0 chr13 73063058 73063275 -47221037 + URR1B DNA MER1_type 7 225 0 9 1142 1016 146 6 0 chr13 73063911 73064089 -47220223 + CT-rich Low_complexity Low_complexity 2 180 0 9 1142 881 264 63 38 chr13 73064532 73064847 -47219465 + MTE2b LTR MaLR 57 379 0 9 1142 198 0 0 0 chr13 73064854 73064876 -47219436 + (TG)n Simple_repeat Simple_repeat 2 23 0 9 1142 325 281 76 76 chr13 73066300 73066458 -47217854 + RLTR14 LTR ERV1 225 382 0 9 1142 239 254 45 0 chr13 73067072 73067169 -47217143 - ID4 SINE ID -45 107 2 9 1142 306 281 97 0 chr13 73067178 73067292 -47217020 - PB1 SINE Alu -2 125 1 9 1142 561 30 0 0 chr13 73067604 73067671 -47216641 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 1142 208 53 26 26 chr13 73069068 73069107 -47215205 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1142 578 296 23 0 chr13 73069364 73069536 -47214776 - MER2 DNA MER2_type -50 295 120 1 1142 856 230 226 32 chr13 73070190 73070378 -47213934 - MTE2b LTR MaLR -2 377 165 1 1142 270 0 0 0 chr13 73070378 73070408 -47213904 + (TTTAG)n Simple_repeat Simple_repeat 5 34 0 1 1142 856 230 226 32 chr13 73070408 73070533 -47213779 - MTE2b LTR MaLR -215 164 3 1 1142 227 230 64 51 chr13 73072954 73073032 -47211280 + ID4 SINE ID 3 81 -2 1 1142 617 204 7 0 chr13 73073375 73073517 -47210795 + (TA)n Simple_repeat Simple_repeat 1 143 0 1 1142 399 92 0 0 chr13 73073516 73073581 -47210731 + (GA)n Simple_repeat Simple_repeat 2 66 0 1 1142 405 136 0 0 chr13 73075481 73075547 -47208765 + (GGA)n Simple_repeat Simple_repeat 1 66 0 1 1142 794 139 0 7 chr13 73075550 73075688 -47208624 + (GAAAA)n Simple_repeat Simple_repeat 4 140 0 1 1142 261 0 0 0 chr13 73076209 73076238 -47208074 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1142 835 293 31 34 chr13 73076866 73077159 -47207153 + B4A SINE B4 1 292 0 1 1142 735 206 0 0 chr13 73077178 73077358 -47206954 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1142 1081 117 6 0 chr13 73077562 73077724 -47206588 + B2_Mm2 SINE B2 1 163 -32 1 1142 252 0 0 0 chr13 73077724 73077752 -47206560 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 1142 1188 68 0 0 chr13 73078273 73078419 -47205893 + B1_Mus2 SINE Alu 2 147 0 1 1142 367 79 48 0 chr13 73078424 73078487 -47205825 + (GAAA)n Simple_repeat Simple_repeat 2 67 0 1 1142 360 64 0 0 chr13 73079729 73079776 -47204536 + (TCC)n Simple_repeat Simple_repeat 2 48 0 1 1142 320 306 73 9 chr13 73080512 73080621 -47203691 - PB1D7 SINE Alu -2 118 3 1 1142 286 291 31 0 chr13 73080771 73080898 -47203414 + L1M2 LINE L1 3232 3362 -2781 1 1142 2538 305 97 60 chr13 73081016 73081381 -47202931 - MTE-int LTR MaLR -135 1445 1045 1 1142 3401 43 2 0 chr13 73081381 73081780 -47202532 + MTB LTR MaLR 1 400 0 1 1142 2538 305 97 60 chr13 73081780 73082438 -47201874 - MTE-int LTR MaLR -536 1044 351 1 1142 2149 61 7 7 chr13 73082438 73082717 -47201595 - L1Md_F2 LINE L1 -14 6568 6290 1 1142 2538 305 97 60 chr13 73082717 73083003 -47201309 - MTE-int LTR MaLR -1230 350 86 1 1142 817 271 61 19 chr13 73082997 73083211 -47201101 - MTE2b LTR MaLR -145 234 12 1 1142 1345 302 86 38 chr13 73083390 73084231 -47200081 + L1M2 LINE L1 3360 4240 -1903 1 1142 372 244 25 16 chr13 73084238 73084359 -47199953 + (CA)n Simple_repeat Simple_repeat 2 123 0 1 1142 369 297 40 26 chr13 73084449 73084601 -47199711 + GA-rich Low_complexity Low_complexity 4 157 0 1 1142 4565 120 78 9 chr13 73084604 73085437 -47198875 - RLTR13D6 LTR ERVK -4 1029 11 1 1142 282 288 0 0 chr13 73087217 73087290 -47197022 + B4A SINE B4 217 289 -3 1 1142 216 67 0 0 chr13 73087343 73087373 -47196939 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1142 633 245 7 0 chr13 73087470 73087609 -47196703 - B3A SINE B2 -57 141 2 1 1142 381 298 83 8 chr13 73088269 73088401 -47195911 - RSINE1 SINE B4 -20 145 4 1 1142 415 266 172 54 chr13 73089639 73090047 -47194265 - L1MC1 LINE L1 -339 5994 5536 1 1142 975 296 85 7 chr13 73090064 73090513 -47193799 - L1M3 LINE L1 -1359 4781 4298 1 1142 387 0 0 0 chr13 73090927 73090970 -47193342 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1 1142 213 39 0 0 chr13 73090970 73090995 -47193317 + (TGG)n Simple_repeat Simple_repeat 1 26 0 1 1142 366 42 0 0 chr13 73091589 73091637 -47192675 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 1142 269 289 43 32 chr13 73092275 73092368 -47191944 - PB1D10 SINE Alu -18 102 9 1 1142 656 311 59 69 chr13 73092517 73092807 -47191505 + B4A SINE B4 6 292 0 1 1142 281 398 27 0 chr13 73093578 73093764 -47190548 + MER63C DNA AcHobo 478 668 -262 1 1142 1233 133 113 0 chr13 73095006 73095209 -47189103 + URR1A DNA MER1_type 1 226 0 1 1142 257 250 31 0 chr13 73095220 73095284 -47189028 + MLT1C LTR MaLR 20 85 -382 1 1142 540 0 0 0 chr13 73098087 73098147 -47186165 + (AGATG)n Simple_repeat Simple_repeat 5 64 0 1 1142 355 279 67 37 chr13 73098433 73098567 -47185745 - LTR16B2 LTR ERVL -308 154 17 1 1142 381 180 62 62 chr13 73099526 73099750 -47184562 + (TAGA)n Simple_repeat Simple_repeat 1 224 0 1 1142 334 64 72 31 chr13 73099783 73099880 -47184432 + (TAGA)n Simple_repeat Simple_repeat 1 101 0 1 1142 441 0 0 0 chr13 73099880 73099929 -47184383 + (GA)n Simple_repeat Simple_repeat 1 49 0 1 1142 2212 68 249 15 chr13 73099929 73100258 -47184054 + MTB_Mm LTR MaLR 2 407 0 1 1142 522 0 0 0 chr13 73100264 73100322 -47183990 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 1 1142 221 122 41 0 chr13 73101011 73101060 -47183252 + A-rich Low_complexity Low_complexity 2 52 0 1 1142 3111 9 6 3 chr13 73101806 73102151 -47182161 - ORR1A0 LTR MaLR 0 346 1 1 1142 296 242 30 34 chr13 73102411 73102516 -47181796 + PB1D7 SINE Alu 1 112 -8 1 1142 354 331 14 7 chr13 73102787 73102930 -47181382 + (CA)n Simple_repeat Simple_repeat 1 144 0 1 1142 308 200 0 0 chr13 73103168 73103223 -47181089 - B4A SINE B4 -20 272 218 1 1142 580 258 25 75 chr13 73103233 73103434 -47180878 - B3A SINE B2 -1 197 7 1 1142 390 198 64 32 chr13 73103441 73103535 -47180777 - B4A SINE B4 -60 232 136 1 1142 461 222 35 12 chr13 73103536 73103709 -47180603 + (TATG)n Simple_repeat Simple_repeat 4 180 0 1 1142 222 306 23 12 chr13 73103717 73103803 -47180509 - B1F1 SINE Alu -60 89 3 1 1142 591 318 13 0 chr13 73103803 73103879 -47180433 - B4A SINE B4 -205 87 10 1 1142 1308 62 6 0 chr13 73104299 73104477 -47179835 + L1Md_F2 LINE L1 6398 6576 -6 1 1142 360 0 0 0 chr13 73104477 73104517 -47179795 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1142 786 286 14 0 chr13 73104595 73104808 -47179504 - B3 SINE B2 0 216 1 1 1142 438 36 0 0 chr13 73106589 73106645 -47177667 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1142 677 333 10 0 chr13 73106655 73106853 -47177459 - ID_B1 SINE B4 -21 203 4 1 1142 759 52 0 0 chr13 73106912 73107008 -47177304 + (TCC)n Simple_repeat Simple_repeat 2 97 0 1 1142 428 315 170 22 chr13 73108089 73108407 -47175905 - L1M2 LINE L1 -476 5815 5451 1 1142 1148 161 73 13 chr13 73108946 73109143 -47175169 - ORR1C1 LTR MaLR -2 376 182 1 1142 1082 30 8 0 chr13 73109143 73109277 -47175035 + (GGGAGA)n Simple_repeat Simple_repeat 5 139 0 1 1142 1148 161 73 13 chr13 73109277 73109312 -47175000 - ORR1C1 LTR MaLR -197 181 132 1 1142 463 282 164 55 chr13 73110393 73111008 -47173304 + L1MDa LINE L1 1281 1962 -4671 1 1142 1337 138 76 5 chr13 73111802 73112013 -47172299 + URR1A DNA MER1_type 1 226 0 1 1142 444 228 20 10 chr13 73112527 73112629 -47171683 + PB1D10 SINE Alu 1 103 -14 1 1142 442 175 6 61 chr13 73112668 73112769 -47171543 + polypurine Low_complexity Low_complexity 3 97 0 1 1142 1112 45 0 58 chr13 73112769 73112960 -47171352 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 1 1142 442 175 6 61 chr13 73112960 73113022 -47171290 + polypurine Low_complexity Low_complexity 98 157 0 1 1142 467 56 14 0 chr13 73113279 73113350 -47170962 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1142 1884 119 11 0 chr13 73113409 73113687 -47170625 + ORR1A3 LTR MaLR 46 326 0 1 1142 293 156 0 0 chr13 73115158 73115203 -47169109 + (TCTCTG)n Simple_repeat Simple_repeat 1 45 0 1 1142 250 310 28 0 chr13 73115759 73115830 -47168482 - MER2 DNA MER2_type -271 74 2 1 1142 344 332 113 89 chr13 73116603 73117009 -47167303 + MER57C2 LTR ERV1 9 424 -10 1 1142 447 19 0 0 chr13 73119506 73119558 -47164754 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1142 600 256 58 0 chr13 73119628 73119765 -47164547 + RSINE1 SINE B4 7 151 -14 1 1142 550 187 13 19 chr13 73121655 73121813 -47162499 + GA-rich Low_complexity Low_complexity 3 159 0 1 1142 470 185 8 23 chr13 73121830 73121963 -47162349 + GA-rich Low_complexity Low_complexity 3 133 0 1 1142 40155 29 2 8 chr13 73122626 73128839 -47155473 - L1Md_T LINE L1 0 6582 409 1 1142 690 160 0 0 chr13 73129194 73129325 -47154987 + (TCCA)n Simple_repeat Simple_repeat 2 132 0 1 1142 305 302 20 15 chr13 73129372 73129578 -47154734 + (TCCA)n Simple_repeat Simple_repeat 1 207 0 1 1142 186 43 0 0 chr13 73130067 73130090 -47154222 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 1 1142 195 42 0 0 chr13 73130829 73130853 -47153459 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1142 21 71 0 0 chr13 73131242 73131284 -47153028 + AT_rich Low_complexity Low_complexity 1 42 0 1 1142 1287 170 560 31 chr13 73132804 73132942 -47151370 - Lx9 LINE L1 -1 7643 7420 1 1142 447 35 0 0 chr13 73132942 73132999 -47151313 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1142 315 0 0 0 chr13 73132999 73133033 -47151279 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1142 1287 238 88 49 chr13 73133033 73133391 -47150921 - Lx9 LINE L1 -225 7419 7060 1 1142 330 300 0 0 chr13 73133548 73133628 -47150684 + B4 SINE B4 195 274 -18 1 1142 477 0 0 0 chr13 73133637 73133690 -47150622 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1142 611 250 8 0 chr13 73136060 73136184 -47148128 - RSINE1 SINE B4 -14 151 27 1 1142 1229 103 43 19 chr13 73136366 73136573 -47147739 + MTB_Mm LTR MaLR 1 212 -188 1 1142 1053 60 0 80 chr13 73136573 73136736 -47147576 + L1_Mus2 LINE L1 6414 6563 -3 1 1142 297 0 0 0 chr13 73136736 73136769 -47147543 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1142 1559 84 4 26 chr13 73136769 73137000 -47147312 + MTB_Mm LTR MaLR 182 407 0 1 1142 225 0 0 0 chr13 73137727 73137752 -47146560 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 1 1143 695 157 121 0 chr13 73138461 73138627 -47145685 + Lx9 LINE L1 7458 7643 -1 1 1143 1006 282 28 14 chr13 73139388 73139672 -47144640 + B4 SINE B4 1 288 -4 1 1143 299 275 16 16 chr13 73139674 73139933 -47144379 + (CATATA)n Simple_repeat Simple_repeat 1 259 0 1 1143 435 228 4 30 chr13 73139873 73140112 -47144200 + (CATA)n Simple_repeat Simple_repeat 1 232 0 1 1143 306 186 45 37 chr13 73140125 73140259 -47144053 + (CATATA)n Simple_repeat Simple_repeat 6 140 0 1 1143 23 0 0 0 chr13 73140505 73140528 -47143784 + AT_rich Low_complexity Low_complexity 1 23 0 1 1143 1166 87 0 9 chr13 73143608 73143828 -47140484 + (GAA)n Simple_repeat Simple_repeat 1 217 0 2 1143 232 348 6 24 chr13 73144092 73144260 -47140052 + (CATA)n Simple_repeat Simple_repeat 2 166 0 2 1143 318 295 0 30 chr13 73144311 73144444 -47139868 + (CATATA)n Simple_repeat Simple_repeat 4 132 0 2 1143 244 212 11 23 chr13 73144477 73144564 -47139748 + (CATA)n Simple_repeat Simple_repeat 3 88 0 2 1143 222 62 0 0 chr13 73145168 73145200 -47139112 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1143 209 280 0 0 chr13 73146161 73146211 -47138101 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1143 24 0 0 0 chr13 73147272 73147296 -47137016 + AT_rich Low_complexity Low_complexity 1 24 0 2 1143 378 0 0 0 chr13 73149721 73149763 -47134549 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1143 324 348 113 18 chr13 73151370 73151654 -47132658 + L1MC3 LINE L1 1404 1714 -4794 2 1143 324 277 114 38 chr13 73152161 73152554 -47131758 + L1MC3 LINE L1 2604 3036 -3285 2 1143 291 277 101 20 chr13 73152713 73152912 -47131400 + L1MC3 LINE L1 3056 3270 -3051 2 1143 477 0 0 0 chr13 73154144 73154197 -47130115 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1143 257 282 121 0 chr13 73154430 73154579 -47129733 + L1MC3 LINE L1 5116 5282 -1039 2 1143 280 164 30 0 chr13 73154588 73154655 -47129657 + (CA)n Simple_repeat Simple_repeat 2 70 0 2 1143 516 193 40 6 chr13 73154678 73154822 -47129490 - MTD LTR MaLR -43 376 240 2 1143 305 246 19 16 chr13 73155069 73155156 -47129156 - MLT1A0 LTR MaLR -55 412 246 2 1143 346 232 51 31 chr13 73155165 73155263 -47129049 + L1MC3 LINE L1 6230 6329 -1631 2 1143 2120 176 74 2 chr13 73155349 73155742 -47128570 - MTC LTR MaLR 0 421 1 2 1143 209 273 18 0 chr13 73156209 73156264 -47128048 + GA-rich Low_complexity Low_complexity 1 56 0 2 1143 234 0 0 0 chr13 73157895 73157921 -47126391 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1143 203 294 0 0 chr13 73158424 73158475 -47125837 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 2 1143 333 0 0 0 chr13 73158476 73158513 -47125799 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1143 703 336 118 13 chr13 73159320 73159784 -47124528 + Lx8 LINE L1 6960 7472 -1 2 1143 2979 73 25 12 chr13 73161791 73162193 -47122119 - MTB_Mm LTR MaLR 0 407 1 2 1143 28927 61 2 6 chr13 73162793 73167063 -47117249 - L1Md_A LINE L1 -1043 4840 590 2 1143 2024 106 7 0 chr13 73167066 73167349 -47116963 - ORR1A2 LTR MaLR -42 285 1 2 1143 321 68 0 0 chr13 73167349 73167393 -47116919 + (TGGA)n Simple_repeat Simple_repeat 3 46 0 2 1143 471 162 0 0 chr13 73167497 73167596 -47116716 + (CA)n Simple_repeat Simple_repeat 2 100 0 2 1143 423 285 144 62 chr13 73167606 73167849 -47116463 + MLT1C LTR MaLR 119 458 -9 2 1143 23 0 0 0 chr13 73168240 73168263 -47116049 + AT_rich Low_complexity Low_complexity 1 23 0 2 1143 333 0 0 0 chr13 73168500 73168537 -47115775 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1143 333 239 78 86 chr13 73169883 73170011 -47114301 + MT2B LTR ERVL 152 278 -323 2 1143 565 246 77 0 chr13 73169903 73170033 -47114279 + B1_Mur1 SINE Alu 10 149 0 2 1143 615 81 0 0 chr13 73170044 73170130 -47114182 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 2 1143 213 121 0 0 chr13 73172739 73172772 -47111540 + (GAA)n Simple_repeat Simple_repeat 2 34 0 2 1143 224 59 29 0 chr13 73174098 73174132 -47110180 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 2 1143 365 183 0 37 chr13 73174339 73174447 -47109865 + CT-rich Low_complexity Low_complexity 2 105 0 2 1143 475 282 137 6 chr13 73174896 73175071 -47109241 - Tigger5 DNA MER2_type -23 2383 2186 2 1143 338 337 72 16 chr13 73175142 73175335 -47108977 - Tigger5 DNA MER2_type -2181 225 22 2 1143 1065 152 84 0 chr13 73175784 73175962 -47108350 - Lx2B LINE L1 -315 6685 6493 2 1143 1547 225 88 10 chr13 73176070 73176456 -47107856 + MTD LTR MaLR 4 419 0 2 1143 393 22 0 0 chr13 73176837 73176883 -47107429 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1143 1627 50 5 0 chr13 73177706 73177908 -47106404 + MTB LTR MaLR 1 203 -197 2 1143 1924 58 25 4 chr13 73177908 73178149 -47106163 + L1_Mus1 LINE L1 6121 6366 -201 2 1143 489 76 0 0 chr13 73178149 73178215 -47106097 + (TA)n Simple_repeat Simple_repeat 2 67 0 2 1143 1635 60 5 9 chr13 73178231 73178448 -47105864 + MTB LTR MaLR 185 400 0 2 1143 229 225 46 81 chr13 73179477 73179564 -47104748 - ORR1A0 LTR MaLR -197 149 66 2 1143 375 148 0 0 chr13 73180604 73180692 -47103620 + (TG)n Simple_repeat Simple_repeat 2 89 0 2 1143 1048 263 43 0 chr13 73180695 73180950 -47103362 - B4 SINE B4 -2 290 25 2 1143 1761 205 73 11 chr13 73182424 73182887 -47101425 - RCHARR1 DNA MER1_type -16 958 467 2 1143 461 210 36 7 chr13 73182892 73183031 -47101281 + MT2A LTR ERVL 350 492 -41 2 1143 315 257 0 0 chr13 73183032 73183176 -47101136 + (CA)n Simple_repeat Simple_repeat 2 145 0 2 1143 279 71 0 0 chr13 73183211 73183253 -47101059 + (CAGA)n Simple_repeat Simple_repeat 1 42 0 2 1143 1470 149 83 0 chr13 73183374 73183663 -47100649 - Lx9 LINE L1 -1 7643 7331 2 1143 998 172 81 9 chr13 73183663 73183874 -47100438 - Lx9 LINE L1 -438 7206 6981 2 1143 409 291 29 36 chr13 73184448 73184587 -47099725 + L1M2 LINE L1 5440 5577 -720 2 1143 1181 55 7 0 chr13 73185193 73185339 -47098973 + B1_Mus2 SINE Alu 1 147 0 2 1143 678 109 0 0 chr13 73185339 73185440 -47098872 + (GAAA)n Simple_repeat Simple_repeat 3 103 0 2 1143 276 111 0 0 chr13 73185807 73185852 -47098460 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1143 207 0 0 0 chr13 73187962 73187985 -47096327 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 2 1143 1281 154 22 132 chr13 73189660 73190025 -47094287 - Lx7 LINE L1 0 7696 7372 2 1143 1916 221 16 3 chr13 73190030 73190252 -47094060 - Lx7 LINE L1 -717 6979 6755 2 1143 279 0 0 0 chr13 73190252 73190283 -47094029 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 2 1143 1916 221 16 3 chr13 73190283 73190437 -47093875 - Lx7 LINE L1 -942 6754 6599 2 1143 1715 184 73 39 chr13 73190437 73190793 -47093519 - ORR1C2 LTR MaLR -16 368 1 2 1143 4312 220 52 25 chr13 73190793 73190909 -47093403 - ORR1C2-int LTR MaLR 0 1370 1261 2 1143 5114 31 5 0 chr13 73190909 73191498 -47092814 + L1Md_F2 LINE L1 5988 6579 -3 2 1143 4312 220 52 25 chr13 73191498 73192373 -47091939 - ORR1C2-int LTR MaLR -110 1260 353 2 1143 275 266 116 11 chr13 73192420 73192515 -47091797 - RLTR25A LTR ERVK 0 1103 999 2 1143 512 175 4 241 chr13 73192507 73192652 -47091660 - RLTR25B LTR ERVK -248 780 672 2 1143 3116 75 15 0 chr13 73192652 73193051 -47091261 + MTB_Mm LTR MaLR 3 407 0 2 1143 512 175 4 241 chr13 73193051 73193146 -47091166 - RLTR25B LTR ERVK -357 671 597 2 1143 483 96 0 0 chr13 73193233 73193316 -47090996 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 2 1143 241 250 0 15 chr13 73193322 73193387 -47090925 + (CATA)n Simple_repeat Simple_repeat 1 64 0 2 1143 280 233 0 16 chr13 73193440 73193501 -47090811 - B2_Mm2 SINE B2 -134 61 2 2 1143 2299 182 17 80 chr13 73193829 73194307 -47090005 - RLTR25B LTR ERVK -580 448 1 2 1143 6702 158 38 12 chr13 73194309 73195452 -47088860 - L1_Mur3 LINE L1 -80 5800 4632 2 1143 441 0 0 0 chr13 73195452 73195501 -47088811 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1143 6702 158 38 12 chr13 73195501 73195558 -47088754 - L1_Mur3 LINE L1 -1249 4631 4570 2 1143 576 0 0 0 chr13 73195860 73195924 -47088388 + (GAAA)n Simple_repeat Simple_repeat 2 65 0 2 1143 2557 139 18 0 chr13 73196595 73196982 -47087330 - ORR1B1 LTR MaLR 0 394 1 2 1143 275 211 165 21 chr13 73197601 73197698 -47086614 - L1MA4 LINE L1 -400 5900 5790 2 1143 413 256 0 0 chr13 73198124 73198210 -47086102 + ID_B1 SINE B4 116 201 -23 2 1143 387 0 0 0 chr13 73198211 73198254 -47086058 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1143 357 294 161 16 chr13 73198426 73198668 -47085644 + L1M5 LINE L1 2339 2615 -3531 2 1143 307 289 0 11 chr13 73198938 73199029 -47085283 + GA-rich Low_complexity Low_complexity 1 90 0 2 1143 262 318 25 81 chr13 73199029 73199190 -47085122 - ORR1E LTR MaLR -167 192 41 2 1143 364 267 19 62 chr13 73199234 73199394 -47084918 + L1MD LINE L1 2729 2881 -3265 2 1143 1871 227 56 83 chr13 73199407 73199682 -47084630 + Lx6 LINE L1 6747 7012 -448 2 1143 576 0 0 0 chr13 73199682 73199746 -47084566 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1143 1871 227 56 83 chr13 73199746 73200023 -47084289 + Lx6 LINE L1 7013 7284 -176 2 1143 284 83 21 0 chr13 73200037 73200085 -47084227 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 2 1143 27 62 0 0 chr13 73200430 73200478 -47083834 + AT_rich Low_complexity Low_complexity 1 48 0 2 1143 340 293 100 77 chr13 73200479 73200960 -47083352 + L1MC LINE L1 2903 3394 -2752 2 1143 207 114 0 0 chr13 73200994 73201029 -47083283 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1143 3132 71 0 24 chr13 73201985 73202402 -47081910 - MTB_Mm LTR MaLR 0 407 1 2 1143 1340 251 53 14 chr13 73202981 73203337 -47080975 + ORR1D2 LTR MaLR 1 370 0 2 1143 395 288 9 9 chr13 73203816 73203921 -47080391 + PB1D10 SINE Alu 12 116 -1 2 1143 252 180 59 20 chr13 73204127 73204178 -47080134 - MTD LTR MaLR -7 412 360 2 1143 1450 262 79 34 chr13 73205844 73206286 -47078026 - RCHARR1 DNA MER1_type -510 464 3 2 1143 289 351 18 6 chr13 73212365 73212534 -47071778 + (TG)n Simple_repeat Simple_repeat 2 172 0 2 1143 186 43 0 0 chr13 73213205 73213228 -47071084 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1143 283 333 171 0 chr13 73217583 73217688 -47066624 + RSINE1 SINE B4 43 165 0 2 1143 270 160 0 0 chr13 73217727 73217777 -47066535 + (TGGA)n Simple_repeat Simple_repeat 1 50 0 2 1143 38 0 0 0 chr13 73217799 73217837 -47066475 + AT_rich Low_complexity Low_complexity 1 38 0 2 1143 1821 191 21 40 chr13 73219188 73219564 -47064748 - ORR1D1 LTR MaLR -5 369 1 2 1143 1807 209 108 23 chr13 73220381 73220814 -47063498 + RLTR20B3 LTR ERVK 1 453 -124 2 1143 4911 126 19 25 chr13 73220814 73221603 -47062709 + Lx LINE L1 5865 6648 -6 2 1143 1807 209 108 23 chr13 73221603 73221617 -47062695 + RLTR20B3 LTR ERVK 454 489 -88 2 1143 216 97 0 0 chr13 73221617 73221648 -47062664 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1143 1807 209 108 23 chr13 73221648 73221680 -47062632 + RLTR20B3 LTR ERVK 490 521 -56 2 1143 315 0 0 0 chr13 73221689 73221724 -47062588 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1143 313 295 178 51 chr13 73222056 73222331 -47061981 + MLT1E1A LTR MaLR 309 618 -62 2 1143 261 286 151 33 chr13 73222726 73222878 -47061434 + MLT1C LTR MaLR 226 395 -72 2 1143 230 266 172 0 chr13 73225073 73225137 -47059175 + PB1 SINE Alu 1 75 -52 2 1143 229 261 14 42 chr13 73225159 73225213 -47059099 + polypurine Low_complexity Low_complexity 5 57 0 2 1143 1203 102 0 0 chr13 73225213 73225390 -47058922 + (GGGGA)n Simple_repeat Simple_repeat 4 180 0 2 1143 229 261 14 42 chr13 73225390 73225407 -47058905 + polypurine Low_complexity Low_complexity 58 74 0 3 1143 468 0 0 0 chr13 73225533 73225585 -47058727 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1143 860 244 0 0 chr13 73226107 73226271 -47058041 + B3A SINE B2 1 164 -34 3 1143 270 116 0 0 chr13 73226271 73226314 -47057998 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1143 1181 248 98 23 chr13 73227290 73227678 -47056634 - MTD LTR MaLR 0 419 3 3 1143 1386 234 69 24 chr13 73227700 73228120 -47056192 + MTE-int LTR MaLR 52 490 -1090 3 1143 353 256 18 18 chr13 73228324 73228495 -47055817 + (TA)n Simple_repeat Simple_repeat 1 171 0 3 1143 2845 269 107 18 chr13 73228512 73229463 -47054849 + MTE-int LTR MaLR 484 1519 -61 3 1143 1098 252 105 34 chr13 73229469 73229793 -47054519 + ORR1E LTR MaLR 4 350 -9 3 1143 339 328 88 40 chr13 73231027 73231278 -47053034 + MLT1A0 LTR MaLR 19 281 -84 3 1143 246 386 47 8 chr13 73231913 73232041 -47052271 - B1_Mur3 SINE Alu -16 133 1 3 1143 529 265 98 6 chr13 73232041 73232101 -47052211 - ID SINE ID -144 80 6 3 1143 1855 181 19 68 chr13 73232271 73232670 -47051642 + MTB_Mm LTR MaLR 1 380 -27 3 1143 5226 55 1 14 chr13 73232670 73233329 -47050983 + L1_Mus1 LINE L1 5916 6566 -1 3 1143 1855 181 19 68 chr13 73233329 73233355 -47050957 + MTB_Mm LTR MaLR 381 405 -2 3 1143 699 197 0 0 chr13 73233917 73234293 -47050019 + (TG)n Simple_repeat Simple_repeat 1 376 0 3 1143 486 0 0 0 chr13 73235314 73235368 -47048944 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1143 834 327 40 20 chr13 73236323 73236725 -47047587 - L1M2 LINE L1 -1074 5069 4660 3 1143 541 259 152 32 chr13 73236737 73237080 -47047232 - Lx9 LINE L1 -4 7640 7257 3 1143 423 228 0 0 chr13 73237123 73237202 -47047110 + Lx9 LINE L1 7074 7152 -492 3 1143 314 277 79 86 chr13 73237308 73237612 -47046700 - L1M2 LINE L1 -1521 4622 4321 3 1143 590 296 42 157 chr13 73237892 73238311 -47046001 - RMER20B LTR ERVK -38 589 164 3 1143 438 314 97 0 chr13 73238457 73238642 -47045670 - L1M2 LINE L1 -2015 4128 3926 3 1143 521 230 6 0 chr13 73238853 73239031 -47045281 + (TTGG)n Simple_repeat Simple_repeat 2 180 0 3 1143 694 180 11 0 chr13 73239075 73239253 -47045059 + (TTGG)n Simple_repeat Simple_repeat 1 180 0 3 1143 204 163 0 0 chr13 73239283 73239326 -47044986 + (TTGG)n Simple_repeat Simple_repeat 4 46 0 3 1143 539 225 7 0 chr13 73239507 73239645 -47044667 + (TA)n Simple_repeat Simple_repeat 2 140 0 3 1143 230 289 13 0 chr13 73239645 73239721 -47044591 - L1M2 LINE L1 -2561 3582 3506 3 1143 833 254 130 13 chr13 73239733 73240187 -47044125 - L1M2 LINE L1 -2812 3331 2825 3 1143 1098 275 83 53 chr13 73240273 73240800 -47043512 - Ricksha DNA MuDR -534 2712 2170 3 1143 250 315 83 14 chr13 73240812 73240957 -47043355 - Ricksha DNA MuDR -1123 2123 1969 3 1143 327 365 0 0 chr13 73242390 73242457 -47041855 + B4 SINE B4 124 190 -102 3 1143 1716 221 63 72 chr13 73242457 73242828 -47041484 - MT2A LTR ERVL 0 533 174 3 1143 2261 103 6 17 chr13 73242828 73243175 -47041137 - Lx3A LINE L1 -6 6975 6633 3 1143 1716 221 63 72 chr13 73243175 73243341 -47040971 - MT2A LTR ERVL -360 173 1 3 1143 317 267 13 0 chr13 73243671 73243746 -47040566 - B4A SINE B4 -216 76 1 3 1143 863 45 9 0 chr13 73243772 73243884 -47040428 + (TC)n Simple_repeat Simple_repeat 2 114 0 3 1143 1078 78 14 0 chr13 73246504 73246646 -47037666 - B1_Mm SINE Alu -2 145 2 3 1143 390 307 113 79 chr13 73247661 73247926 -47036386 + B4 SINE B4 3 276 -16 3 1143 254 29 29 0 chr13 73247950 73247985 -47036327 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1143 406 226 67 20 chr13 73248461 73248610 -47035702 + L1MDa LINE L1 1828 1983 -4650 3 1143 546 16 0 0 chr13 73248750 73248813 -47035499 + (GGA)n Simple_repeat Simple_repeat 2 64 0 3 1143 499 285 147 6 chr13 73248970 73249078 -47035234 + L1M2 LINE L1 4850 4965 -1178 3 1143 339 94 0 0 chr13 73249078 73249131 -47035181 + L1_Mus2 LINE L1 6514 6566 0 3 1143 499 285 147 6 chr13 73249131 73249382 -47034930 + L1M2 LINE L1 4966 5260 -883 3 1143 277 268 31 0 chr13 73249386 73249483 -47034829 + L1M2 LINE L1 5208 5307 -836 3 1143 303 250 126 21 chr13 73249492 73249635 -47034677 + L1M2 LINE L1 5285 5442 -741 3 1143 1074 271 38 0 chr13 73249640 73249906 -47034406 + B4 SINE B4 15 290 -2 3 1143 233 340 21 0 chr13 73250073 73250167 -47034145 + L1M2 LINE L1 5658 5753 -415 3 1143 395 322 24 68 chr13 73250182 73250496 -47033816 + L1MA7 LINE L1 5735 6037 -254 3 1143 564 326 6 44 chr13 73251605 73251788 -47032524 - B3A SINE B2 -22 176 1 3 1143 514 135 0 0 chr13 73253270 73253359 -47030953 - L1_Mus3 LINE L1 -15 6623 6535 3 1143 21 57 0 0 chr13 73255467 73255502 -47028810 + AT_rich Low_complexity Low_complexity 1 35 0 3 1143 252 0 0 0 chr13 73255928 73255956 -47028356 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1143 1658 47 4 58 chr13 73256941 73257147 -47027165 + L1_Mm LINE L1 5394 5586 -297 3 1143 8706 30 0 0 chr13 73257147 73258143 -47026169 + L1Md_T LINE L1 5587 6582 0 3 1143 1658 47 4 58 chr13 73258143 73258162 -47026150 + L1_Mm LINE L1 5587 5606 -277 3 1143 2482 95 3 0 chr13 73259506 73259832 -47024480 - ORR1A2 LTR MaLR 0 327 1 3 1143 216 0 0 0 chr13 73261432 73261456 -47022856 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1143 41542 14 2 6 chr13 73261474 73267667 -47016645 - L1Md_A LINE L1 0 6582 422 3 1144 216 0 0 0 chr13 73269835 73269859 -47014453 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1144 1736 160 70 18 chr13 73269865 73270196 -47014116 - Lx4A LINE L1 -12 7046 6699 3 1144 447 232 35 9 chr13 73271319 73271432 -47012880 + PB1D7 SINE Alu 3 118 -2 3 1144 194 0 39 0 chr13 73271544 73271570 -47012742 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1144 346 302 12 0 chr13 73271777 73271949 -47012363 + GA-rich Low_complexity Low_complexity 2 175 0 3 1144 183 139 0 0 chr13 73271964 73272000 -47012312 + (CAGAGA)n Simple_repeat Simple_repeat 1 36 0 3 1144 242 247 34 57 chr13 73272114 73272290 -47012022 + (CAGAGA)n Simple_repeat Simple_repeat 5 176 0 3 1144 1331 135 22 4 chr13 73274097 73274327 -47009985 - MTC-int LTR MaLR -377 881 648 3 1144 332 267 23 0 chr13 73274761 73274847 -47009465 + MTEa LTR MaLR 288 375 -4 3 1144 238 284 0 0 chr13 73275261 73275328 -47008984 - ORR1E LTR MaLR -10 349 283 3 1144 1970 115 25 9 chr13 73275337 73275652 -47008660 + ORR1A2 LTR MaLR 1 320 -7 3 1144 260 231 19 0 chr13 73275653 73275705 -47008607 - B4 SINE B4 -225 67 15 3 1144 216 0 0 0 chr13 73276225 73276249 -47008063 + (TCTG)n Simple_repeat Simple_repeat 1 24 0 3 1144 576 42 0 0 chr13 73276458 73276529 -47007783 + (GGA)n Simple_repeat Simple_repeat 1 71 0 3 1144 357 43 0 0 chr13 73276529 73276575 -47007737 + (CGGA)n Simple_repeat Simple_repeat 2 48 0 3 1144 869 250 33 80 chr13 73276622 73276896 -47007416 + ORR1D2 LTR MaLR 105 365 -5 3 1144 272 311 172 0 chr13 73277033 73277155 -47007157 - ID_B1 SINE B4 0 224 82 3 1144 835 173 0 11 chr13 73277329 73277504 -47006808 + GA-rich Low_complexity Low_complexity 1 173 0 3 1144 232 253 58 0 chr13 73277636 73277723 -47006589 - L1M5 LINE L1 -919 5227 5136 3 1144 1096 256 30 94 chr13 73277799 73278351 -47005961 + RMER19C LTR ERVK 1 502 -235 3 1144 516 340 6 41 chr13 73278424 73278593 -47005719 + RSINE1 SINE B4 3 165 0 3 1144 195 205 25 25 chr13 73278605 73278685 -47005627 + (TAGA)n Simple_repeat Simple_repeat 4 83 0 3 1144 238 313 84 26 chr13 73278696 73278850 -47005462 - L1M5 LINE L1 -2159 3987 3825 3 1144 606 222 90 34 chr13 73278940 73279173 -47005139 + L1MDa LINE L1 1098 1343 -5290 3 1144 3308 45 5 29 chr13 73279550 73279960 -47004352 - MTB LTR MaLR 0 400 1 3 1144 2966 35 18 0 chr13 73280177 73280571 -47003741 - IAPLTR2a LTR ERVK -10 401 1 3 1144 6669 60 12 0 chr13 73280573 73281392 -47002920 - IAPEz-int LTR ERVK -2 6479 5651 3 1144 11147 74 44 75 chr13 73281385 73283231 -47001081 - IAPEz-int LTR ERVK -4781 1700 3 3 1144 3443 25 17 0 chr13 73283233 73283637 -47000675 - IAPLTR2a LTR ERVK 0 411 1 3 1144 2979 160 23 76 chr13 73283812 73284000 -47000312 + RMER19C LTR ERVK 1 161 -450 3 1144 2761 113 66 5 chr13 73284000 73284409 -46999903 - RLTR10C LTR ERVK -2 434 1 3 1144 2979 160 23 76 chr13 73284409 73284864 -46999448 + RMER19C LTR ERVK 162 610 -1 3 1144 540 0 0 0 chr13 73285690 73285750 -46998562 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1144 478 261 40 108 chr13 73286012 73286188 -46998124 + MTE2a LTR MaLR 6 169 -210 3 1144 673 206 7 14 chr13 73286439 73286577 -46997735 + B1_Mur1 SINE Alu 1 137 -12 3 1144 1236 197 19 0 chr13 73287406 73287614 -46996698 - B3 SINE B2 -3 213 2 3 1144 315 0 0 0 chr13 73287894 73287929 -46996383 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1144 255 31 0 0 chr13 73287976 73288008 -46996304 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 1144 767 66 0 0 chr13 73288008 73288114 -46996198 - B2_Mm2 SINE B2 -89 106 1 3 1144 650 205 157 257 chr13 73290422 73290835 -46993477 + ORR1D1 LTR MaLR 3 374 0 3 1144 1923 156 69 3 chr13 73290896 73291256 -46993056 + ORR1B1 LTR MaLR 3 386 -8 3 1144 615 27 0 0 chr13 73291738 73291811 -46992501 + (GA)n Simple_repeat Simple_repeat 1 73 0 3 1144 477 0 0 0 chr13 73292366 73292419 -46991893 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1144 431 248 67 44 chr13 73292479 73292614 -46991698 - B1F1 SINE Alu 0 149 12 3 1144 437 306 54 58 chr13 73292888 73293093 -46991219 - MLT1B LTR MaLR -186 204 1 3 1144 680 233 6 89 chr13 73293226 73293405 -46990907 + RSINE1 SINE B4 2 165 0 3 1144 1124 66 0 0 chr13 73293592 73293729 -46990583 + B1_Mus1 SINE Alu 2 138 -10 3 1144 324 0 0 0 chr13 73293729 73293765 -46990547 + (TAA)n Simple_repeat Simple_repeat 2 37 0 3 1144 1036 181 65 0 chr13 73293776 73293975 -46990337 + B3 SINE B2 5 216 0 3 1144 244 102 0 39 chr13 73294774 73294825 -46989487 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 1144 390 101 0 0 chr13 73295034 73295103 -46989209 + (TCTG)n Simple_repeat Simple_repeat 2 70 0 3 1144 864 302 24 21 chr13 73295146 73295437 -46988875 - B4 SINE B4 0 292 1 3 1144 261 0 0 0 chr13 73296783 73296812 -46987500 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1144 516 32 0 0 chr13 73301191 73301253 -46983059 + (TGG)n Simple_repeat Simple_repeat 1 62 0 3 1144 313 321 123 25 chr13 73301256 73301726 -46982586 + L1M4 LINE L1 2416 2931 -3215 3 1144 1252 271 113 0 chr13 73301733 73302132 -46982180 + MT2A LTR ERVL 16 459 -74 3 1144 261 0 0 0 chr13 73302132 73302161 -46982151 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1144 274 303 20 99 chr13 73302170 73302311 -46982001 + L1M4 LINE L1 2942 3079 -3067 3 1144 1167 196 9 23 chr13 73302311 73302530 -46981782 + B3 SINE B2 1 216 0 3 1144 274 303 20 99 chr13 73302530 73302681 -46981631 + L1M4 LINE L1 3080 3211 -2935 3 1144 529 296 24 6 chr13 73302692 73302862 -46981450 + U2 snRNA snRNA 11 183 -5 3 1144 1268 164 113 38 chr13 73303376 73303667 -46980645 - MTC LTR MaLR 0 421 109 3 1144 8264 142 14 10 chr13 73303671 73304981 -46979331 + Lx5 LINE L1 4520 5838 -39 4 1144 2196 69 250 0 chr13 73304981 73305301 -46979011 + MTB LTR MaLR 1 400 0 4 1144 8264 179 65 23 chr13 73305301 73306119 -46978193 + Lx5 LINE L1 5839 6732 -318 4 1144 513 0 0 0 chr13 73306119 73306176 -46978136 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1144 528 16 0 0 chr13 73306176 73306236 -46978076 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 1144 7279 181 67 24 chr13 73306236 73306553 -46977759 + Lx5 LINE L1 6733 7046 -4 4 1144 558 169 3 1 chr13 73306563 73306667 -46977645 - MTC LTR MaLR -290 106 1 3 1144 470 223 10 0 chr13 73307328 73307431 -46976881 + U1 snRNA snRNA 29 132 -33 4 1144 625 248 66 0 chr13 73307482 73307619 -46976693 + B3A SINE B2 3 148 -50 4 1144 215 0 67 0 chr13 73307776 73307806 -46976506 + (CAGAGA)n Simple_repeat Simple_repeat 2 33 0 4 1144 523 290 24 0 chr13 73308206 73308330 -46975982 + B1F SINE Alu 9 135 -14 4 1144 758 160 24 0 chr13 73308334 73308503 -46975809 + (TAGA)n Simple_repeat Simple_repeat 1 173 0 4 1144 2455 99 41 23 chr13 73308509 73308903 -46975409 - MTB_Mm LTR MaLR 0 407 7 4 1144 881 113 6 0 chr13 73308905 73309064 -46975248 + (TAGA)n Simple_repeat Simple_repeat 3 162 0 4 1144 932 136 6 0 chr13 73309938 73310100 -46974212 + (TC)n Simple_repeat Simple_repeat 2 164 0 4 1144 225 261 58 0 chr13 73310192 73310261 -46974051 - B4A SINE B4 -6 286 214 4 1144 2290 70 0 60 chr13 73310269 73310601 -46973711 - L1_Mus2 LINE L1 0 6566 6255 4 1144 2076 111 13 6 chr13 73310624 73310941 -46973371 - ORR1A2 LTR MaLR -8 319 1 4 1144 234 329 74 14 chr13 73311297 73311445 -46972867 - MLT1C LTR MaLR -303 164 8 4 1144 938 106 0 14 chr13 73311437 73311581 -46972731 - MTB LTR MaLR -202 198 57 4 1144 232 265 191 0 chr13 73312787 73312934 -46971378 + MLT1C LTR MaLR 293 467 0 4 1144 469 297 13 33 chr13 73315460 73315613 -46968699 + MTE2a LTR MaLR 51 200 -179 4 1144 369 0 0 0 chr13 73316036 73316077 -46968235 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1144 29 60 0 0 chr13 73316133 73316183 -46968129 + AT_rich Low_complexity Low_complexity 1 50 0 4 1144 234 0 0 0 chr13 73317110 73317136 -46967176 + (CCCTAA)n Simple_repeat Simple_repeat 3 28 0 4 1144 243 213 0 0 chr13 73317574 73317649 -46966663 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 1144 556 195 12 0 chr13 73317672 73317836 -46966476 + (CA)n Simple_repeat Simple_repeat 2 167 0 4 1144 287 281 81 52 chr13 73318219 73318429 -46965883 + L1ME2 LINE L1 5943 6158 -6 4 1144 767 323 45 8 chr13 73318999 73319267 -46965045 - B4 SINE B4 -4 288 11 4 1144 437 62 0 15 chr13 73319269 73319335 -46964977 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1144 3562 268 107 29 chr13 73319740 73321016 -46963296 - Lx8 LINE L1 -4 7469 6095 4 1144 1993 104 23 78 chr13 73321841 73322186 -46962126 + ORR1A4 LTR MaLR 1 326 -3 4 1144 249 140 0 0 chr13 73322620 73322677 -46961635 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 4 1144 260 250 15 0 chr13 73322737 73322805 -46961507 + MLT1B LTR MaLR 190 258 -132 4 1144 1099 202 5 28 chr13 73325934 73326148 -46958164 - B3 SINE B2 -6 210 2 4 1144 355 180 40 13 chr13 73326701 73326853 -46957459 + (TG)n Simple_repeat Simple_repeat 2 157 0 4 1144 664 229 23 80 chr13 73326855 73326947 -46957365 + L1M2 LINE L1 5394 5477 -814 4 1144 1251 41 0 0 chr13 73326947 73327093 -46957219 + B1_Mus2 SINE Alu 1 146 -1 4 1144 321 26 0 0 chr13 73327093 73327131 -46957181 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 4 1144 664 243 72 72 chr13 73327131 73327305 -46957007 + L1M2 LINE L1 5478 5686 -605 4 1144 237 330 74 45 chr13 73329145 73329389 -46954923 - L1MEc LINE L1 -4424 1976 1726 4 1144 2549 260 95 9 chr13 73329387 73330143 -46954169 + Lx8 LINE L1 6480 7300 -173 4 1144 715 97 18 0 chr13 73330161 73330275 -46954037 + (TAGA)n Simple_repeat Simple_repeat 4 119 0 4 1144 288 280 102 9 chr13 73330275 73330383 -46953929 + Lx8 LINE L1 7354 7471 -2 4 1144 234 210 191 35 chr13 73330488 73330661 -46953651 - L1MEc LINE L1 -4879 1521 1322 4 1144 893 135 213 16 chr13 73330770 73330958 -46953354 + URR1B DNA MER1_type 1 225 0 4 1144 652 176 0 0 chr13 73330988 73331107 -46953205 - URR1A DNA MER1_type -88 138 20 4 1144 274 286 143 0 chr13 73331203 73331301 -46953011 - MTE-int LTR MaLR -955 625 514 4 1144 588 305 157 19 chr13 73331350 73331744 -46952568 - MTE-int LTR MaLR -947 423 2 4 1144 831 263 19 74 chr13 73331895 73332166 -46952146 - MTEa LTR MaLR -123 256 1 4 1144 1263 136 36 27 chr13 73332798 73333018 -46951294 + URR1B DNA MER1_type 1 222 -3 4 1144 1118 279 60 146 chr13 73333588 73334475 -46949837 + L1M2 LINE L1 1824 2677 -3466 4 1144 510 237 18 0 chr13 73334475 73334589 -46949723 - B3 SINE B2 -100 116 1 4 1144 1118 279 60 146 chr13 73334589 73334826 -46949486 + L1M2 LINE L1 2678 2907 -3236 4 1144 5916 63 13 8 chr13 73334826 73335598 -46948714 + Lx3_Mus LINE L1 6233 7008 -1 4 1144 1118 290 64 38 chr13 73335598 73335926 -46948386 + L1M2 LINE L1 2908 3226 -2917 4 1144 577 298 80 15 chr13 73335929 73336130 -46948182 + B3 SINE B2 1 214 -2 4 1144 1435 230 93 13 chr13 73336178 73336566 -46947746 - MTD LTR MaLR 0 419 1 4 1144 2097 244 92 73 chr13 73336566 73337375 -46946937 - MTD-int LTR MaLR 0 1258 435 4 1144 1223 347 82 14 chr13 73337545 73337763 -46946549 + Lx8 LINE L1 6628 6849 -624 4 1144 225 65 0 0 chr13 73337763 73337794 -46946518 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1144 1223 347 82 14 chr13 73337794 73338365 -46945947 + Lx8 LINE L1 6850 7470 -3 4 1144 700 238 86 11 chr13 73338563 73338750 -46945562 - B3 SINE B2 -13 203 3 4 1144 214 238 0 0 chr13 73341929 73341971 -46942341 + GA-rich Low_complexity Low_complexity 4 45 0 4 1144 324 296 109 22 chr13 73341972 73342110 -46942202 + HAL1-3A_ME LINE L1 2289 2438 -420 4 1144 316 181 24 0 chr13 73342110 73342193 -46942119 + GA-rich Low_complexity Low_complexity 2 86 0 4 1144 366 273 114 0 chr13 73343451 73343627 -46940685 - MER33 DNA MER1_type -6 318 123 4 1144 230 333 12 23 chr13 73343799 73343885 -46940427 + PB1D10 SINE Alu 24 108 -9 4 1144 559 230 5 130 chr13 73343907 73344092 -46940220 - RSINE1 SINE B4 -2 163 2 4 1144 228 356 0 0 chr13 73344122 73344195 -46940117 + ID4_ SINE ID 2 74 -9 4 1144 938 262 155 3 chr13 73345705 73346027 -46938285 - MTE2b LTR MaLR -4 375 5 4 1144 2639 270 139 7 chr13 73346054 73346908 -46937404 - MTE2b-int LTR MaLR -39 1541 575 4 1144 691 143 10 16 chr13 73346911 73347049 -46937263 - ORR1D2 LTR MaLR -6 373 247 4 1144 536 235 140 0 chr13 73347089 73347225 -46937087 + MTE-int LTR MaLR 49 203 -1377 4 1144 430 229 9 9 chr13 73347232 73347338 -46936974 - ORR1D2 LTR MaLR -264 106 1 4 1144 1456 247 148 12 chr13 73347338 73347845 -46936467 - MTE2b-int LTR MaLR -1004 576 1 4 1144 1126 266 49 31 chr13 73347857 73348206 -46936106 - MTE2b LTR MaLR -23 356 2 4 1144 434 284 17 95 chr13 73349044 73349223 -46935089 + RSINE1 SINE B4 1 165 0 4 1144 243 272 0 0 chr13 73349241 73349333 -46934979 + (CA)n Simple_repeat Simple_repeat 1 92 0 4 1144 1946 178 126 19 chr13 73349340 73349752 -46934560 + RMER6B LTR ERVK 2 457 -4 4 1144 489 17 0 0 chr13 73349752 73349810 -46934502 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1144 2226 146 41 0 chr13 73350288 73350657 -46933655 - ORR1C2 LTR MaLR 0 384 1 4 1144 227 200 22 0 chr13 73351081 73351126 -46933186 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1144 5234 112 1 2 chr13 73352849 73353681 -46930631 - Lx LINE L1 -704 5932 5101 4 1144 4703 109 68 7 chr13 73353681 73354384 -46929928 + Lx LINE L1 5906 6651 -3 4 1144 216 0 0 0 chr13 73356296 73356320 -46927992 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1144 717 261 125 43 chr13 73357008 73357264 -46927048 - B4 SINE B4 0 292 16 4 1144 182 274 103 35 chr13 73359321 73359408 -46924904 + MIRb SINE MIR 81 173 -95 4 1144 265 284 111 7 chr13 73360071 73360206 -46924106 - ORR1D2 LTR MaLR -10 369 221 4 1144 442 190 264 0 chr13 73360339 73360460 -46923852 - ORR1D2 LTR MaLR -217 153 1 4 1144 687 259 81 91 chr13 73360463 73360657 -46923655 + L1MC2 LINE L1 5614 5825 -519 4 1144 691 238 13 13 chr13 73360657 73360806 -46923506 + B1_Mur2 SINE Alu 1 149 0 4 1144 687 259 81 91 chr13 73360806 73360896 -46923416 + L1MC2 LINE L1 5826 5895 -449 4 1144 328 329 91 29 chr13 73361056 73361297 -46923015 + B4A SINE B4 37 292 0 4 1144 6948 211 59 77 chr13 73361542 73362353 -46921959 - L1_Rod LINE L1 -929 4918 4072 4 1144 856 142 14 21 chr13 73362353 73362497 -46921815 + B1_Mur4 SINE Alu 3 145 -5 4 1144 6948 211 59 77 chr13 73362497 73362846 -46921466 - L1_Rod LINE L1 -1776 4071 3733 4 1144 1773 125 61 32 chr13 73362846 73363159 -46921153 + Lx LINE L1 6321 6642 -12 4 1144 6948 211 59 77 chr13 73363159 73364287 -46920025 - L1_Rod LINE L1 -2115 3732 2670 4 1144 258 32 0 0 chr13 73364287 73364318 -46919994 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1144 1162 292 123 11 chr13 73365983 73366710 -46917602 - L1MA4A LINE L1 -373 5930 5098 4 1144 360 0 0 0 chr13 73367345 73367385 -46916927 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1144 214 242 48 87 chr13 73367724 73367828 -46916484 - PB1D7 SINE Alu -2 118 19 4 1144 246 256 39 0 chr13 73367754 73367832 -46916480 - ID_B1 SINE B4 -48 176 96 4 1144 506 211 167 0 chr13 73367877 73367991 -46916321 - B1_Mur2 SINE Alu -12 137 5 4 1144 339 316 109 35 chr13 73368392 73368648 -46915664 - ORR1E LTR MaLR -21 338 64 4 1144 1245 236 59 24 chr13 73369855 73370208 -46914104 + MTD LTR MaLR 5 360 -36 4 1144 428 307 98 63 chr13 73371588 73371984 -46912328 + MLT1C LTR MaLR 48 457 -10 4 1144 201 39 0 0 chr13 73372538 73372564 -46911748 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1144 619 289 66 24 chr13 73373351 73373564 -46910748 + ID_B1 SINE B4 2 223 -1 4 1144 258 247 0 25 chr13 73374147 73374278 -46910034 + G-rich Low_complexity Low_complexity 1 127 0 4 1144 1539 42 5 25 chr13 73376023 73376220 -46908092 + B2_Mm1t SINE B2 1 193 0 4 1144 242 348 49 28 chr13 73376318 73376460 -46907852 - MLT1A1 LTR MaLR -263 145 1 4 1144 1243 35 0 0 chr13 73377620 73377763 -46906549 - B1_Mm SINE Alu -2 145 3 4 1144 342 0 0 0 chr13 73377825 73377863 -46906449 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1144 432 333 0 6 chr13 73377912 73378075 -46906237 + (TG)n Simple_repeat Simple_repeat 1 162 0 4 1144 243 0 0 0 chr13 73379703 73379730 -46904582 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1144 259 336 23 105 chr13 73380319 73380452 -46903860 + MLT1J LTR MaLR 241 362 -150 4 1144 252 170 0 0 chr13 73380543 73380596 -46903716 + (CAT)n Simple_repeat Simple_repeat 3 55 0 4 1144 270 279 108 32 chr13 73381378 73381691 -46902621 - L1MD LINE L1 -2840 3306 2956 4 1144 206 154 36 55 chr13 73382092 73382147 -46902165 + T-rich Low_complexity Low_complexity 6 59 0 4 1144 1222 48 7 0 chr13 73382147 73382293 -46902019 - B1_Mus2 SINE Alu 0 147 1 5 1144 333 332 77 13 chr13 73382301 73382536 -46901776 - L1MA5 LINE L1 -1 6299 6050 5 1144 371 320 159 20 chr13 73382708 73382960 -46901352 - RMER15 LTR ERVL -14 561 275 5 1144 1191 103 52 42 chr13 73383316 73383508 -46900804 - B2_Mm2 SINE B2 -1 194 1 5 1144 3178 56 35 2 chr13 73385291 73385685 -46898627 - MTB_Mm LTR MaLR 0 407 1 5 1144 318 267 152 22 chr13 73386136 73386274 -46898038 + MLT2B3 LTR ERVL 144 299 -255 5 1144 239 318 24 0 chr13 73387628 73387713 -46896599 + MLT1F2 LTR MaLR 47 133 -427 5 1144 1086 140 0 0 chr13 73388047 73388226 -46896086 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 1144 463 273 167 44 chr13 73389630 73389948 -46894364 + ORR1E LTR MaLR 3 359 0 5 1144 354 359 7 27 chr13 73389955 73390104 -46894208 + RSINE1 SINE B4 3 148 -17 5 1144 312 283 15 98 chr13 73390684 73390817 -46893495 + L1M5 LINE L1 4942 5063 -1083 5 1144 486 0 0 0 chr13 73391255 73391309 -46893003 + (TGG)n Simple_repeat Simple_repeat 3 56 0 5 1144 270 0 0 0 chr13 73391310 73391340 -46892972 + (CTG)n Simple_repeat Simple_repeat 3 32 0 5 1144 251 361 0 0 chr13 73391342 73391414 -46892898 - ID4 SINE ID -3 80 9 5 1144 415 340 157 9 chr13 73392963 73393301 -46891011 + MLT1C LTR MaLR 45 432 -35 5 1144 405 0 0 0 chr13 73393645 73393690 -46890622 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1144 1461 168 123 70 chr13 73394250 73394443 -46889869 - ORR1C1 LTR MaLR 0 378 149 5 1144 645 14 0 0 chr13 73394443 73394517 -46889795 + (GA)n Simple_repeat Simple_repeat 1 74 0 5 1144 1461 168 123 70 chr13 73394517 73394682 -46889630 - ORR1C1 LTR MaLR -230 148 2 5 1144 234 62 0 0 chr13 73398207 73398239 -46886073 + (CGG)n Simple_repeat Simple_repeat 2 33 0 5 1145 180 91 22 43 chr13 73402074 73402120 -46882192 + T-rich Low_complexity Low_complexity 1 45 0 5 1145 234 0 0 0 chr13 73403189 73403215 -46881097 + (CCCCG)n Simple_repeat Simple_repeat 5 30 0 5 1145 727 108 8 8 chr13 73403496 73403617 -46880695 + (TCTCCC)n Simple_repeat Simple_repeat 3 123 0 5 1145 218 167 0 0 chr13 73405207 73405243 -46879069 + G-rich Low_complexity Low_complexity 3 38 0 5 1145 207 139 0 0 chr13 73408725 73408761 -46875551 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1145 23 0 0 0 chr13 73409987 73410010 -46874302 + GC_rich Low_complexity Low_complexity 1 23 0 5 1145 216 333 0 29 chr13 73410606 73410708 -46873604 + GA-rich Low_complexity Low_complexity 1 99 0 5 1145 180 0 0 0 chr13 73411085 73411105 -46873207 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5 1145 393 149 0 0 chr13 73414359 73414426 -46869886 + (CA)n Simple_repeat Simple_repeat 1 67 0 5 1145 1940 119 40 118 chr13 73414535 73414934 -46869378 - MTC LTR MaLR -53 368 1 5 1145 318 26 0 0 chr13 73415861 73415900 -46868412 + (CTG)n Simple_repeat Simple_repeat 2 40 0 5 1145 815 197 0 6 chr13 73415898 73416077 -46868235 + CT-rich Low_complexity Low_complexity 1 178 0 5 1145 240 67 0 0 chr13 73416077 73416107 -46868205 + (TCC)n Simple_repeat Simple_repeat 2 31 0 5 1145 1044 148 32 0 chr13 73416263 73416452 -46867860 + B2_Mm2 SINE B2 1 195 0 5 1145 351 0 0 0 chr13 73417139 73417178 -46867134 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1145 261 215 0 58 chr13 73417204 73417273 -46867039 + 4.5SRNA scRNA scRNA 26 90 -4 5 1145 606 136 29 10 chr13 73417212 73417316 -46866996 + B1_Mus1 SINE Alu 35 140 -8 5 1145 182 191 21 0 chr13 73417322 73417369 -46866943 + GA-rich Low_complexity Low_complexity 1 48 0 5 1145 405 284 77 26 chr13 73417450 73417645 -46866667 + MLT1B LTR MaLR 160 364 -26 5 1145 270 217 0 0 chr13 73417769 73417838 -46866474 + (CATA)n Simple_repeat Simple_repeat 4 72 0 5 1145 373 283 39 7 chr13 73417889 73418042 -46866270 + (CATATA)n Simple_repeat Simple_repeat 2 159 0 5 1145 966 56 0 0 chr13 73418043 73418168 -46866144 + (TATATG)n Simple_repeat Simple_repeat 6 130 0 5 1145 473 285 27 14 chr13 73418666 73418812 -46865500 - B1F SINE Alu -1 148 1 5 1145 279 0 0 0 chr13 73418971 73419002 -46865310 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1145 243 0 0 0 chr13 73420750 73420777 -46863535 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1145 182 330 52 31 chr13 73421988 73422085 -46862227 + MIRb SINE MIR 112 210 -58 5 1145 551 228 179 22 chr13 73424482 73424666 -46859646 - MTD LTR MaLR -94 325 113 5 1145 319 329 161 20 chr13 73426861 73427062 -46857250 + L1MC2 LINE L1 6051 6287 -57 5 1145 403 269 8 42 chr13 73427062 73427182 -46857130 - PB1D10 SINE Alu -1 116 1 5 1145 319 329 161 20 chr13 73427182 73427228 -46857084 + L1MC2 LINE L1 6288 6333 -11 5 1145 252 0 0 0 chr13 73427254 73427282 -46857030 + (GA)n Simple_repeat Simple_repeat 2 29 0 5 1145 321 333 13 13 chr13 73429295 73429444 -46854868 + (CATA)n Simple_repeat Simple_repeat 3 151 0 5 1145 408 350 11 18 chr13 73429489 73429840 -46854472 + (CATATA)n Simple_repeat Simple_repeat 1 348 0 5 1145 1562 166 172 59 chr13 73430614 73430985 -46853327 + MTC LTR MaLR 1 413 -8 5 1145 812 264 156 38 chr13 73432148 73432429 -46851883 - MTE2a LTR MaLR -54 325 12 5 1145 238 296 0 24 chr13 73432862 73432945 -46851367 + (TATG)n Simple_repeat Simple_repeat 1 81 0 5 1145 504 37 12 12 chr13 73434683 73434765 -46849547 + L1Md_F2 LINE L1 6488 6569 -13 5 1145 308 164 90 0 chr13 73434937 73435004 -46849308 + B1_Mur1 SINE Alu 77 149 0 5 1145 1097 56 0 7 chr13 73435540 73435683 -46848629 - B1_Mus1 SINE Alu -5 143 2 5 1145 486 0 0 0 chr13 73436784 73436838 -46847474 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1145 400 315 68 7 chr13 73437412 73437559 -46846753 - MLT1C LTR MaLR -244 223 68 5 1145 441 0 0 0 chr13 73439261 73439310 -46845002 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1145 1050 90 70 53 chr13 73439338 73439525 -46844787 - B2_Mm2 SINE B2 -2 193 4 5 1145 855 202 90 10 chr13 73439619 73439819 -46844493 - B3 SINE B2 0 216 1 5 1145 306 107 0 0 chr13 73440046 73440102 -46844210 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 1145 21 0 0 0 chr13 73440164 73440185 -46844127 + AT_rich Low_complexity Low_complexity 1 21 0 5 1145 618 14 0 0 chr13 73440287 73440358 -46843954 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 5 1145 1107 73 92 0 chr13 73440360 73440524 -46843788 - B2_Mm2 SINE B2 -15 180 2 5 1145 317 157 0 41 chr13 73440910 73440983 -46843329 + G-rich Low_complexity Low_complexity 3 72 0 5 1145 341 43 0 21 chr13 73441820 73441868 -46842444 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 5 1145 248 299 59 8 chr13 73445285 73445403 -46838909 + L1MB3 LINE L1 5593 5716 -464 5 1145 322 291 68 6 chr13 73445462 73445638 -46838674 + L1MB3 LINE L1 5816 6002 -181 5 1145 243 247 96 0 chr13 73445665 73445738 -46838574 + L1MB3 LINE L1 6054 6133 -47 5 1145 326 247 14 0 chr13 73445754 73445827 -46838485 + ID4_ SINE ID 1 74 -9 5 1145 1799 218 60 0 chr13 73449294 73449749 -46834563 + Lx8 LINE L1 5424 5910 -1786 5 1145 1568 164 88 119 chr13 73449881 73450079 -46834233 + ORR1C1 LTR MaLR 4 221 -157 5 1145 1820 176 108 27 chr13 73450079 73450488 -46833824 + RMER10A LTR ERVL 1 442 0 5 1145 1568 164 88 119 chr13 73450488 73450676 -46833636 + ORR1C1 LTR MaLR 222 378 0 5 1145 441 81 0 0 chr13 73450759 73450821 -46833491 + (CA)n Simple_repeat Simple_repeat 2 63 0 5 1145 2137 264 136 90 chr13 73450858 73451949 -46832363 + Lx8 LINE L1 6246 7377 -96 5 1145 1414 94 11 0 chr13 73451949 73452140 -46832172 + B2_Mm1t SINE B2 1 193 0 5 1145 2137 264 136 90 chr13 73452140 73452222 -46832090 + Lx8 LINE L1 7378 7472 -1 5 1145 889 234 198 18 chr13 73453547 73453830 -46830482 - MTEa LTR MaLR -43 336 3 5 1145 313 130 0 0 chr13 73454176 73454230 -46830082 - Lx9 LINE L1 0 7644 7591 5 1145 2099 179 47 2 chr13 73454324 73454727 -46829585 + MTC LTR MaLR 1 421 0 5 1145 265 283 0 0 chr13 73454762 73454815 -46829497 + ID4_ SINE ID 1 53 -30 5 1145 375 317 123 55 chr13 73454832 73455052 -46829260 + L1M5 LINE L1 2922 3156 -2990 5 1145 232 282 35 12 chr13 73455155 73455241 -46829071 - L1_Rod LINE L1 -3468 2379 2292 5 1145 2098 122 17 111 chr13 73455896 73456303 -46828009 + ORR1B1 LTR MaLR 26 394 0 5 1145 387 226 456 0 chr13 73456633 73456758 -46827554 + B3A SINE B2 7 188 -10 5 1145 268 270 130 0 chr13 73463261 73463361 -46820951 - MER117 DNA MER1_type -9 188 76 5 1145 212 128 21 21 chr13 73463571 73463619 -46820693 + A-rich Low_complexity Low_complexity 3 50 0 5 1145 1497 173 117 24 chr13 73463989 73464336 -46819976 + MTD LTR MaLR 1 405 -14 5 1145 1962 144 147 20 chr13 73465219 73465572 -46818740 - RMER10B LTR ERVL 0 398 1 5 1145 396 263 50 8 chr13 73466774 73466785 -46817527 - ID_B1 SINE B4 -18 206 86 5 1145 498 200 67 0 chr13 73466785 73466890 -46817422 - B1F1 SINE Alu -33 116 5 5 1145 628 238 102 36 chr13 73466930 73467126 -46817186 - B3 SINE B2 -6 210 2 5 1145 442 299 103 7 chr13 73467179 73467324 -46816988 - RSINE1 SINE B4 -4 161 3 5 1145 261 139 0 0 chr13 73467360 73467403 -46816909 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1145 2353 78 3 46 chr13 73467408 73467755 -46816557 - L1_Mus2 LINE L1 -1 6565 6234 5 1145 311 112 0 4 chr13 73467755 73467809 -46816503 + L1_Mus2 LINE L1 6210 6268 -314 5 1145 189 107 0 0 chr13 73467981 73468009 -46816303 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1145 323 268 0 0 chr13 73469349 73469420 -46814892 - PB1D9 SINE Alu -6 114 44 5 1145 1222 97 62 11 chr13 73469795 73469972 -46814340 + B2_Mm2 SINE B2 2 187 -8 5 1145 2103 129 0 132 chr13 73470947 73471402 -46812910 + RMER10B LTR ERVL 4 398 0 5 1145 3323 53 2 2 chr13 73472403 73472803 -46811509 - MTB LTR MaLR 0 400 1 5 1145 389 294 92 8 chr13 73472921 73473041 -46811271 - RMER30 DNA MER1_type -8 194 65 5 1145 1122 88 129 0 chr13 73475189 73475359 -46808953 - B2_Mm1t SINE B2 -1 192 1 5 1145 2286 84 14 113 chr13 73475919 73476282 -46808030 + ORR1A2 LTR MaLR 1 327 0 6 1145 1355 263 71 3 chr13 73476588 73476942 -46807370 - MTEb LTR MaLR -1 378 1 6 1145 237 250 39 65 chr13 73478305 73478382 -46805930 + ID4_ SINE ID 2 76 -7 6 1145 1096 116 0 0 chr13 73479626 73479772 -46804540 - B1_Mus1 SINE Alu 0 148 3 6 1145 503 290 213 20 chr13 73480060 73480313 -46803999 - MLT1B LTR MaLR -18 372 71 6 1145 180 0 0 0 chr13 73481696 73481716 -46802596 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1145 891 63 55 0 chr13 73481994 73482121 -46802191 - B2_Mm1t SINE B2 -19 174 41 6 1145 1136 121 6 11 chr13 73482121 73482297 -46802015 - B2_Mm2 SINE B2 -16 179 5 6 1145 1030 128 64 0 chr13 73482406 73482578 -46801734 - RMER19B LTR ERVK -38 864 682 6 1145 849 209 81 0 chr13 73483051 73483223 -46801089 - B3 SINE B2 -28 188 3 6 1145 1374 210 108 39 chr13 73483596 73483977 -46800335 + RMER20B LTR ERVK 12 418 -209 6 1145 3118 115 25 11 chr13 73483989 73484515 -46799797 - L1VL4 LINE L1 -5379 923 391 6 1145 402 84 0 40 chr13 73484519 73484593 -46799719 + L1_Mus4 LINE L1 6558 6628 -8 6 1145 512 268 25 44 chr13 73484593 73484753 -46799559 + RMER20B LTR ERVK 449 605 -22 6 1145 336 215 12 48 chr13 73485279 73485362 -46798950 + Lx9 LINE L1 6411 6490 -1154 6 1145 1718 226 8 13 chr13 73485450 73485823 -46798489 + Lx9 LINE L1 6404 6774 -870 6 1145 2415 122 34 13 chr13 73485823 73486213 -46798099 + ORR1B1 LTR MaLR 1 386 -8 6 1145 362 120 15 38 chr13 73486227 73486303 -46798009 - B2_Mm2 SINE B2 -127 71 1 6 1145 667 151 9 0 chr13 73486680 73486786 -46797526 + MTC LTR MaLR 100 206 -215 6 1145 336 247 290 20 chr13 73486984 73487129 -46797183 + MTE2b LTR MaLR 5 188 -191 6 1145 432 335 47 12 chr13 73488547 73488807 -46795505 - MLT2D LTR ERVL -293 263 4 6 1145 1023 93 19 0 chr13 73489659 73489821 -46794491 + (TTC)n Simple_repeat Simple_repeat 3 167 0 6 1145 203 200 25 0 chr13 73489821 73489861 -46794451 + CT-rich Low_complexity Low_complexity 6 46 0 6 1145 1348 74 23 6 chr13 73492141 73492318 -46791994 + B2_Mm2 SINE B2 2 181 -14 6 1145 329 127 0 17 chr13 73492366 73492472 -46791840 + B2_Mm2 SINE B2 46 185 -10 6 1145 226 250 19 0 chr13 73492511 73492615 -46791697 + (CA)n Simple_repeat Simple_repeat 1 106 0 6 1145 338 268 15 89 chr13 73493343 73493478 -46790834 - HAL1-3A_ME LINE L1 -759 2099 1975 6 1145 929 288 7 42 chr13 73493535 73493818 -46790494 - B4A SINE B4 -18 274 2 6 1145 216 179 0 0 chr13 73494583 73494622 -46789690 + T-rich Low_complexity Low_complexity 4 42 0 6 1145 285 29 0 0 chr13 73494758 73494792 -46789520 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1145 234 0 0 0 chr13 73495333 73495359 -46788953 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1145 241 345 127 0 chr13 73495894 73496004 -46788308 - ORR1E LTR MaLR -162 197 74 6 1145 536 333 26 44 chr13 73496146 73496375 -46787937 - MLT1A0 LTR MaLR -56 309 85 6 1145 221 264 38 0 chr13 73496385 73496438 -46787874 + ID4_ SINE ID 28 82 -1 6 1145 558 67 0 0 chr13 73496742 73496817 -46787495 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 1145 694 240 31 92 chr13 73496872 73496912 -46787400 + B3 SINE B2 2 36 -180 6 1145 1228 48 0 0 chr13 73496912 73497048 -46787264 + B1_Mus1 SINE Alu 1 136 -12 6 1145 903 19 0 0 chr13 73497048 73497153 -46787159 + (GAA)n Simple_repeat Simple_repeat 1 105 0 6 1145 694 240 31 92 chr13 73497161 73497273 -46787039 + B3 SINE B2 37 141 -75 6 1145 1271 82 58 49 chr13 73497273 73497478 -46786834 - L1_Mus2 LINE L1 0 6566 6360 6 1145 694 240 31 92 chr13 73497478 73497553 -46786759 + B3 SINE B2 142 216 0 6 1145 1390 79 11 0 chr13 73497566 73497756 -46786556 + B2_Mm1t SINE B2 2 193 0 6 1145 1003 248 87 65 chr13 73497885 73498208 -46786104 - MER2 DNA MER2_type -15 330 1 6 1145 271 305 86 129 chr13 73498949 73499182 -46785130 + RMER12 LTR ERVK 742 964 -358 6 1145 802 268 38 0 chr13 73499159 73499342 -46784970 - B4 SINE B4 -4 288 99 6 1145 465 277 0 11 chr13 73499337 73499432 -46784880 - B3 SINE B2 -67 149 56 6 1145 1077 108 18 6 chr13 73501208 73501376 -46782936 + URR1B DNA MER1_type 55 224 -1 1 1145 1663 143 273 3 chr13 73501678 73502008 -46782304 - MTC LTR MaLR 0 421 3 2 1145 213 140 25 136 chr13 73502358 73502556 -46781756 + (CACTG)n Simple_repeat Simple_repeat 5 180 0 3 1145 298 303 0 100 chr13 73504547 73504568 -46779744 - RSINE1 SINE B4 -64 101 87 4 1145 3525 107 31 6 chr13 73504568 73505087 -46779225 - Lx LINE L1 -2 6652 6121 5 1145 298 303 0 100 chr13 73505087 73505175 -46779137 - RSINE1 SINE B4 -79 86 3 4 1145 413 250 94 24 chr13 73505175 73505298 -46779014 - MLT1C LTR MaLR -282 185 54 6 1145 1415 264 16 41 chr13 73505769 73506068 -46778244 + MTEa LTR MaLR 1 292 -87 7 1145 3018 23 12 0 chr13 73506068 73506410 -46777902 + ORR1A0 LTR MaLR 1 346 0 8 1145 1415 264 16 41 chr13 73506410 73506497 -46777815 + MTEa LTR MaLR 293 376 -3 7 1145 249 255 126 11 chr13 73506560 73506655 -46777657 + L1MCa LINE L1 510 615 -5893 9 1145 693 286 220 25 chr13 73506770 73507514 -46776798 + L1MCa LINE L1 829 1717 -4791 9 1145 577 247 188 35 chr13 73507511 73507884 -46776428 + L1MCa LINE L1 1864 2293 -4215 9 1145 246 268 183 19 chr13 73507929 73508142 -46776170 + L1MCa LINE L1 2378 2625 -3696 9 1145 1214 225 66 30 chr13 73508227 73508727 -46775585 + L1MCa LINE L1 2845 3362 -2959 9 1145 1261 94 44 0 chr13 73508733 73508913 -46775399 + B2_Mm2 SINE B2 1 188 -7 1 1145 683 240 203 20 chr13 73508913 73509131 -46775181 + L1MCa LINE L1 3375 3623 -2698 9 1145 3351 45 5 0 chr13 73509131 73509529 -46774783 + MTB LTR MaLR 1 400 0 1 1145 683 240 203 20 chr13 73509529 73509616 -46774696 + L1MCa LINE L1 3624 3736 -2585 9 1145 1716 267 128 6 chr13 73509906 73510617 -46773695 + L1MCa LINE L1 4665 5462 -859 9 1145 315 319 0 32 chr13 73510634 73510728 -46773584 + B4A SINE B4 2 92 -200 1 1145 342 310 218 15 chr13 73510745 73511093 -46773219 - MLT1F1 LTR MaLR -63 485 77 1 1145 2431 102 0 0 chr13 73513276 73513601 -46770711 + ORR1A2 LTR MaLR 3 327 0 1 1145 885 188 76 14 chr13 73513828 73514039 -46770273 + RMER1B Other Other 843 1066 0 1 1145 1244 54 0 0 chr13 73515737 73515884 -46768428 - B1_Mm SINE Alu 0 147 1 1 1145 447 245 51 0 chr13 73517056 73517154 -46767158 - RCHARR1 DNA MER1_type -804 170 68 1 1145 1035 241 67 8 chr13 73518987 73519255 -46765057 + B4A SINE B4 1 284 -8 1 1145 242 205 0 0 chr13 73519282 73519321 -46764991 + B4A SINE B4 250 288 -4 1 1145 245 233 0 0 chr13 73519340 73519383 -46764929 + B4A SINE B4 246 288 -4 2 1145 245 233 0 0 chr13 73519402 73519445 -46764867 + B4A SINE B4 246 288 -4 2 1145 242 205 0 0 chr13 73519468 73519507 -46764805 + B4A SINE B4 250 288 -4 2 1145 253 209 0 0 chr13 73519526 73519569 -46764743 + B4A SINE B4 246 288 -4 2 1145 242 205 0 0 chr13 73519592 73519631 -46764681 + B4A SINE B4 250 288 -4 2 1145 252 244 0 0 chr13 73519650 73519695 -46764617 + B4A SINE B4 246 290 -2 2 1145 1267 206 227 9 chr13 73519733 73520076 -46764236 + MTD LTR MaLR 2 419 0 2 1145 1155 70 0 0 chr13 73520756 73520898 -46763414 - B1_Mus2 SINE Alu -2 145 4 2 1145 228 326 97 34 chr13 73520923 73521161 -46763151 - L1MEd LINE L1 -4887 1232 980 2 1145 707 249 48 0 chr13 73521161 73521326 -46762986 - B3 SINE B2 -5 211 39 2 1145 239 324 48 14 chr13 73521521 73521668 -46762644 - L1MEd LINE L1 -5370 749 598 2 1145 339 104 0 159 chr13 73523678 73523804 -46760508 + (CACTG)n Simple_repeat Simple_repeat 1 106 0 3 1145 317 239 178 8 chr13 73525565 73525683 -46758629 - HAL1 LINE L1 -846 1661 1524 3 1145 2970 69 38 13 chr13 73527908 73528305 -46756007 + MTB_Mm LTR MaLR 1 407 0 3 1145 277 338 33 13 chr13 73528581 73528731 -46755581 + L1MEg2 LINE L1 4 156 -6296 3 1145 1895 234 33 161 chr13 73529438 73530136 -46754176 - RMER19C LTR ERVK 0 611 3 3 1145 480 68 0 0 chr13 73530336 73530395 -46753917 + L1_Mus3 LINE L1 6373 6431 -207 3 1145 631 281 20 0 chr13 73530399 73530545 -46753767 + B4 SINE B4 143 291 -1 3 1145 681 242 26 73 chr13 73530623 73530815 -46753497 + ORR1D2 LTR MaLR 1 183 -187 3 1145 522 297 105 61 chr13 73530864 73531208 -46753104 + L1MEg2 LINE L1 4352 4710 -2744 3 1146 1354 214 31 28 chr13 73531399 73531687 -46752625 + B4 SINE B4 3 291 -1 3 1146 423 291 162 42 chr13 73532145 73532708 -46751604 + L1MEg2 LINE L1 5348 5983 -1471 3 1146 206 216 0 0 chr13 73533077 73533114 -46751198 + polypurine Low_complexity Low_complexity 3 39 0 3 1146 189 94 0 0 chr13 73533116 73533148 -46751164 + (CAGA)n Simple_repeat Simple_repeat 2 33 0 4 1146 332 250 38 0 chr13 73535578 73535658 -46748654 - ID4 SINE ID 0 83 1 4 1146 285 351 38 0 chr13 73535693 73535878 -46748434 - L1MEd LINE L1 -2697 3449 3258 4 1146 25 0 0 0 chr13 73535943 73535968 -46748344 + AT_rich Low_complexity Low_complexity 1 25 0 4 1146 2251 81 3 50 chr13 73536175 73536457 -46747855 + ORR1A4 LTR MaLR 7 273 -56 4 1146 1405 75 37 5 chr13 73536457 73536646 -46747666 + B2_Mm2 SINE B2 1 195 0 4 1146 2251 81 3 50 chr13 73536646 73536702 -46747610 + ORR1A4 LTR MaLR 274 329 0 4 1146 240 218 57 11 chr13 73536725 73536813 -46747499 + CT-rich Low_complexity Low_complexity 1 92 0 4 1146 648 283 63 27 chr13 73537015 73537316 -46746996 - L1MEd LINE L1 -3078 3068 2757 4 1146 1497 192 81 0 chr13 73537325 73537596 -46746716 - MTD LTR MaLR -8 411 119 4 1146 644 266 57 22 chr13 73537634 73537869 -46746443 + MLT1A1 LTR MaLR 127 401 -7 4 1146 365 282 66 142 chr13 73538143 73538354 -46745958 - L1MEd LINE L1 -5031 1105 911 4 1146 711 249 129 50 chr13 73538627 73538779 -46745533 + Lx8 LINE L1 7167 7326 -147 4 1146 4080 104 38 35 chr13 73538779 73539378 -46744934 - MT2B LTR ERVL 0 601 1 5 1146 711 249 129 50 chr13 73539378 73539504 -46744808 + Lx8 LINE L1 7327 7467 -6 4 1146 2133 190 7 37 chr13 73540257 73540689 -46743623 + MTD LTR MaLR 1 419 0 5 1146 221 93 36 36 chr13 73541153 73541209 -46743103 + (CAAA)n Simple_repeat Simple_repeat 4 59 0 5 1146 626 209 60 37 chr13 73541830 73541964 -46742348 - B1F1 SINE Alu -1 148 12 5 1146 240 247 0 121 chr13 73541890 73541973 -46742339 - MT2B2 LTR ERVL -344 240 168 5 1146 3298 58 5 2 chr13 73542478 73542877 -46741435 + MTB LTR MaLR 1 400 0 5 1146 808 162 214 36 chr13 73542903 73543095 -46741217 - URR1A DNA MER1_type 0 226 1 5 1146 378 0 0 0 chr13 73544259 73544301 -46740011 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 5 1146 345 293 36 12 chr13 73544826 73544909 -46739403 + PB1D10 SINE Alu 4 88 -29 5 1146 371 232 31 16 chr13 73547361 73547488 -46736824 + (CAGAGA)n Simple_repeat Simple_repeat 4 132 0 5 1146 259 241 140 14 chr13 73547616 73547759 -46736553 + L1_Mur3 LINE L1 1638 1798 -4082 6 1146 1045 110 14 0 chr13 73547792 73547938 -46736374 + B1_Mus1 SINE Alu 1 148 0 6 1146 4598 137 73 63 chr13 73548032 73548415 -46735897 + RMER12 LTR ERVK 1 375 -947 6 1146 1373 104 5 5 chr13 73548415 73548609 -46735703 + B2_Mm2 SINE B2 2 195 0 6 1146 4598 179 96 66 chr13 73548609 73549445 -46734867 + RMER12 LTR ERVK 376 1322 0 6 1146 762 302 0 15 chr13 73549746 73549941 -46734371 + B3A SINE B2 2 193 -5 6 1146 672 283 69 40 chr13 73549970 73550091 -46734221 + L1_Mur3 LINE L1 2178 2311 -3569 6 1146 4268 74 60 0 chr13 73550091 73550642 -46733670 + MT2B2 LTR ERVL 1 584 0 6 1146 672 283 69 40 chr13 73550642 73550896 -46733416 + L1_Mur3 LINE L1 2312 2564 -3316 6 1146 891 275 113 100 chr13 73550908 73551212 -46733100 + L1M2 LINE L1 4182 4492 -1651 6 1146 1356 34 91 0 chr13 73551212 73551388 -46732924 + B2_Mm1a SINE B2 2 193 0 6 1146 891 275 113 100 chr13 73551388 73551842 -46732470 + L1M2 LINE L1 4493 4950 -1193 6 1146 319 312 87 94 chr13 73551941 73552217 -46732095 + ORR1D2 LTR MaLR 87 360 -10 6 1146 198 0 0 0 chr13 73552792 73552814 -46731498 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 6 1146 216 158 0 0 chr13 73552843 73552881 -46731431 + (CATA)n Simple_repeat Simple_repeat 1 38 0 7 1146 1261 82 5 5 chr13 73553116 73553301 -46731011 - L1_Mus3 LINE L1 -5 6633 6449 7 1146 3570 181 8 16 chr13 73553325 73553950 -46730362 + Lx5 LINE L1 6431 7050 0 7 1146 1242 54 0 0 chr13 73553997 73554144 -46730168 - B1_Mm SINE Alu 0 147 1 7 1146 332 323 51 6 chr13 73557108 73557264 -46727048 + MLT1C LTR MaLR 287 449 -18 7 1146 306 0 0 0 chr13 73558690 73558724 -46725588 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1146 212 182 0 22 chr13 73560132 73560151 -46724161 + polypyrimidine Low_complexity Low_complexity 27 45 0 7 1146 1103 94 0 22 chr13 73560151 73560335 -46723977 + (TC)n Simple_repeat Simple_repeat 1 180 0 7 1146 212 182 0 22 chr13 73560335 73560360 -46723952 + polypyrimidine Low_complexity Low_complexity 2 26 0 7 1146 526 303 64 6 chr13 73561387 73561543 -46722769 + B3A SINE B2 29 193 -5 7 1146 456 19 0 0 chr13 73561620 73561673 -46722639 + (TGG)n Simple_repeat Simple_repeat 3 55 0 8 1146 381 22 0 0 chr13 73561756 73561802 -46722510 + (T)n Simple_repeat Simple_repeat 1 46 0 8 1146 1251 61 0 0 chr13 73561802 73561949 -46722363 - B1_Mus2 SINE Alu 0 147 1 8 1146 1291 104 16 5 chr13 73562060 73562244 -46722068 - B2_Mm2 SINE B2 -7 188 3 8 1146 242 169 0 33 chr13 73563843 73563904 -46720408 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 8 1146 930 282 57 13 chr13 73565362 73565660 -46718652 + RMER15-int LTR ERVL 4155 4465 -534 8 1146 917 156 123 37 chr13 73565686 73565851 -46718461 + B3 SINE B2 1 182 -34 8 1146 258 32 0 0 chr13 73565851 73565882 -46718430 + (CA)n Simple_repeat Simple_repeat 2 32 0 8 1146 917 156 123 37 chr13 73565882 73565903 -46718409 + B3 SINE B2 183 203 -13 8 1146 231 36 0 0 chr13 73565904 73565932 -46718380 + (GA)n Simple_repeat Simple_repeat 1 28 0 8 1146 270 0 0 0 chr13 73566721 73566751 -46717561 + (TGG)n Simple_repeat Simple_repeat 2 31 0 8 1146 242 328 48 70 chr13 73567112 73567299 -46717013 - MLT1F LTR MaLR -308 240 58 9 1146 336 260 48 48 chr13 73567365 73567470 -46716842 + MLT1A0 LTR MaLR 228 332 -33 9 1146 245 310 26 8 chr13 73567579 73567696 -46716616 - L1MEg LINE L1 -5155 929 811 9 1146 223 186 0 0 chr13 73567773 73567816 -46716496 + A-rich Low_complexity Low_complexity 1 43 0 9 1146 755 173 6 0 chr13 73568035 73568203 -46716109 + (TCTCTG)n Simple_repeat Simple_repeat 6 174 0 9 1146 454 243 65 9 chr13 73570310 73570480 -46713832 + L1M5 LINE L1 5560 5743 -421 9 1146 246 32 0 0 chr13 73570509 73570540 -46713772 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 1146 22 56 0 0 chr13 73570596 73570632 -46713680 + AT_rich Low_complexity Low_complexity 1 36 0 9 1146 198 94 94 0 chr13 73570727 73570791 -46713521 + GA-rich Low_complexity Low_complexity 2 71 0 9 1146 538 284 91 40 chr13 73570956 73571209 -46713103 - MLT1F1 LTR MaLR -9 560 295 9 1146 233 57 0 28 chr13 73574244 73574280 -46710032 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1146 348 321 93 0 chr13 73574912 73575074 -46709238 - RMER20B LTR ERVK -271 356 180 1 1146 1404 74 16 0 chr13 73575702 73575892 -46708420 + B2_Mm1t SINE B2 1 193 0 1 1146 1161 63 0 7 chr13 73575979 73576122 -46708190 + B1_Mus2 SINE Alu 2 143 -4 1 1146 261 0 0 0 chr13 73576123 73576152 -46708160 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1146 378 0 0 0 chr13 73577065 73577107 -46707205 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 1146 372 59 0 0 chr13 73577107 73577157 -46707155 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1146 533 268 257 18 chr13 73577163 73577334 -46706978 - B4 SINE B4 -76 216 5 1 1146 336 346 37 22 chr13 73577726 73577862 -46706450 + MLT1C LTR MaLR 204 341 -126 1 1146 919 25 17 0 chr13 73580447 73580565 -46703747 + (CA)n Simple_repeat Simple_repeat 1 120 0 1 1146 358 280 0 11 chr13 73581193 73581287 -46703025 + BC1_Mm scRNA scRNA 16 108 -44 1 1146 742 231 116 39 chr13 73581831 73581913 -46702399 + B4A SINE B4 3 85 -207 1 1146 441 0 0 0 chr13 73581913 73581962 -46702350 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1146 742 231 116 39 chr13 73581962 73582086 -46702226 + B4A SINE B4 86 225 -67 1 1146 491 56 14 0 chr13 73582200 73582271 -46702041 + (CA)n Simple_repeat Simple_repeat 1 72 0 1 1146 1116 298 99 75 chr13 73583020 73583663 -46700649 - RMER13A LTR ERVK -201 659 1 1 1146 414 0 0 0 chr13 73584851 73584897 -46699415 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1146 450 0 0 0 chr13 73584897 73584946 -46699366 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1146 335 231 15 0 chr13 73585384 73585449 -46698863 - tRNA-Lys-AAA tRNA tRNA -9 67 2 1 1146 603 258 120 5 chr13 73587207 73587398 -46696914 + B3 SINE B2 4 216 0 1 1146 725 223 0 54 chr13 73588707 73588854 -46695458 + B1_Mur1 SINE Alu 5 143 -6 1 1146 333 190 10 20 chr13 73588856 73588914 -46695398 + polypurine Low_complexity Low_complexity 3 60 0 1 1146 975 140 99 0 chr13 73588914 73589085 -46695227 + B2_Mm2 SINE B2 4 191 -4 1 1146 333 190 10 20 chr13 73589085 73589128 -46695184 + polypurine Low_complexity Low_complexity 61 103 0 1 1146 235 218 0 0 chr13 73589638 73589664 -46694648 + A-rich Low_complexity Low_complexity 1 26 0 1 1146 1181 34 0 52 chr13 73589664 73589819 -46694493 + B1_Mm SINE Alu 1 147 0 1 1146 235 218 0 0 chr13 73589819 73589847 -46694465 + A-rich Low_complexity Low_complexity 27 54 0 1 1146 339 324 68 42 chr13 73589943 73590133 -46694179 - RMER15 LTR ERVL -1 574 380 1 1146 2368 102 9 0 chr13 73590218 73590542 -46693770 + ORR1A2 LTR MaLR 1 327 0 1 1146 202 220 100 17 chr13 73592725 73592785 -46691527 + MIRb SINE MIR 118 182 -86 1 1146 312 319 32 32 chr13 73592868 73592991 -46691321 - MLT1J LTR MaLR -298 214 92 1 1146 2655 138 0 81 chr13 73592991 73593449 -46690863 + MTC LTR MaLR 1 421 0 1 1146 522 317 56 43 chr13 73593564 73593798 -46690514 + MLT1A0 LTR MaLR 103 339 -26 1 1146 501 17 0 0 chr13 73594043 73594101 -46690211 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 1 1146 1301 72 6 0 chr13 73594102 73594268 -46690044 - B2_Mm1a SINE B2 -26 167 1 1 1146 3968 45 6 14 chr13 73594318 73594818 -46689494 - LTRIS2 LTR ERV1 0 564 69 1 1146 462 287 16 39 chr13 73595327 73595454 -46688858 - B1F SINE Alu -25 124 1 1 1146 3030 82 12 5 chr13 73595469 73595887 -46688425 + BGLII LTR ERVK 1 421 0 1 1146 388 326 126 0 chr13 73596968 73597048 -46687264 + L1MD LINE L1 2643 2726 -3420 1 1146 945 222 239 38 chr13 73597048 73597233 -46687079 + MTEa LTR MaLR 1 188 -191 1 1146 279 0 0 0 chr13 73597233 73597264 -46687048 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1146 945 222 239 38 chr13 73597264 73597392 -46686920 + MTEa LTR MaLR 189 376 -3 1 1146 388 321 125 0 chr13 73597392 73597522 -46686790 + L1MD LINE L1 2727 2879 -3267 1 1146 1167 22 58 0 chr13 73597560 73597698 -46686614 + B1_Mm SINE Alu 1 146 -1 1 1146 809 298 66 42 chr13 73597756 73597845 -46686467 - B4A SINE B4 -27 265 180 1 1146 1228 129 119 0 chr13 73597845 73598047 -46686265 + URR1A DNA MER1_type 1 226 0 1 1146 809 298 66 42 chr13 73598047 73598216 -46686096 - B4A SINE B4 -113 179 1 1 1146 319 319 29 41 chr13 73598228 73598470 -46685842 + L1MC LINE L1 2875 3113 -3033 1 1146 586 277 132 46 chr13 73598492 73598666 -46685646 + B4 SINE B4 8 196 -96 1 1146 464 291 42 43 chr13 73598681 73598873 -46685439 + B4A SINE B4 24 229 -63 1 1146 333 0 0 0 chr13 73598924 73598961 -46685351 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1146 312 325 0 12 chr13 73598967 73599048 -46685264 + B4 SINE B4 213 292 0 1 1146 280 283 8 104 chr13 73599234 73599368 -46684944 - B4 SINE B4 -146 146 26 1 1146 361 312 228 15 chr13 73599403 73599754 -46684558 + L1M4 LINE L1 3263 3673 -2473 1 1146 273 118 0 0 chr13 73599755 73599806 -46684506 + (G)n Simple_repeat Simple_repeat 1 51 0 1 1146 1194 62 0 0 chr13 73599911 73600055 -46684257 + B1_Mus2 SINE Alu 4 147 0 1 1146 186 43 0 0 chr13 73600056 73600079 -46684233 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1146 295 345 81 0 chr13 73600131 73600328 -46683984 + L1M4 LINE L1 4150 4362 -1784 1 1146 436 286 8 25 chr13 73600520 73600642 -46683670 + PB1 SINE Alu 1 120 -7 1 1146 252 383 0 21 chr13 73600792 73600888 -46683424 + PB1D10 SINE Alu 17 110 -7 1 1146 427 326 139 17 chr13 73601099 73601674 -46682638 + L1MEc LINE L1 1659 2303 -4097 1 1146 339 127 0 0 chr13 73601713 73601776 -46682536 + (GTTTG)n Simple_repeat Simple_repeat 5 67 0 1 1146 408 276 9 19 chr13 73601788 73601895 -46682417 - PB1D7 SINE Alu -5 115 10 1 1146 243 288 157 30 chr13 73601996 73602232 -46682080 + L1MEc LINE L1 2574 2839 -3480 1 1146 569 297 94 24 chr13 73602269 73602600 -46681712 + L1M5 LINE L1 2778 3131 -3015 1 1146 260 255 89 54 chr13 73602772 73602884 -46681428 + LTR16B2 LTR ERVL 90 205 -257 1 1146 369 304 96 43 chr13 73602964 73603194 -46681118 - MLT1C LTR MaLR -10 457 216 1 1146 1201 48 7 0 chr13 73603613 73603758 -46680554 + B1_Mm SINE Alu 2 147 0 1 1146 219 236 28 0 chr13 73604723 73604795 -46679517 + (CTCGG)n Simple_repeat Simple_repeat 3 76 0 1 1146 28 0 0 0 chr13 73604838 73604866 -46679446 + GC_rich Low_complexity Low_complexity 1 28 0 1 1146 739 323 27 48 chr13 73608742 73608954 -46675358 - B4A SINE B4 -3 289 79 1 1146 2576 142 34 17 chr13 73608954 73609368 -46674944 + MTC LTR MaLR 1 421 0 1 1146 739 323 27 48 chr13 73609368 73609448 -46674864 - B4A SINE B4 -214 78 3 1 1146 2452 83 38 6 chr13 73610476 73610817 -46673495 + MTA_Mm LTR MaLR 1 352 -44 1 1146 1275 47 0 0 chr13 73613481 73613629 -46670683 + B1_Mus1 SINE Alu 1 148 0 1 1146 216 0 0 0 chr13 73615114 73615138 -46669174 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1146 447 35 0 0 chr13 73617302 73617359 -46666953 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1146 682 203 51 0 chr13 73617380 73617498 -46666814 - RSINE1 SINE B4 -39 126 3 1 1146 2190 133 123 6 chr13 73617826 73618175 -46666137 + ORR1B1 LTR MaLR 1 390 -4 1 1146 336 318 16 38 chr13 73618330 73618513 -46665799 + (TG)n Simple_repeat Simple_repeat 2 180 0 1 1146 249 316 58 84 chr13 73618527 73618752 -46665560 + RLTR21 LTR ERVK 1090 1308 -264 1 1146 871 266 114 5 chr13 73621174 73621393 -46662919 - B4 SINE B4 -2 290 48 1 1146 333 0 0 0 chr13 73621883 73621920 -46662392 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1146 231 114 0 0 chr13 73623170 73623205 -46661107 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1146 2473 164 116 112 chr13 73623535 73624222 -46660090 + RMER6C LTR ERVK 1 690 0 1 1146 312 372 0 11 chr13 73624548 73624730 -46659582 + (TATG)n Simple_repeat Simple_repeat 1 180 0 1 1146 282 287 25 34 chr13 73624835 73624954 -46659358 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 1 1146 210 192 0 0 chr13 73625870 73625922 -46658390 + CT-rich Low_complexity Low_complexity 2 53 0 1 1146 344 232 131 0 chr13 73627065 73627164 -46657148 - MLT1D LTR MaLR -359 146 35 1 1146 2005 193 26 26 chr13 73627578 73627993 -46656319 - MTD LTR MaLR 0 419 5 1 1146 196 239 22 0 chr13 73628186 73628232 -46656080 + L3 LINE CR1 719 765 -3724 1 1146 1524 182 174 14 chr13 73629677 73630034 -46654278 - MTD LTR MaLR 0 419 6 1 1146 2007 92 50 62 chr13 73630250 73630573 -46653739 - ORR1A2 LTR MaLR -8 319 1 1 1146 280 303 151 74 chr13 73630892 73631105 -46653207 - Looper DNA PiggyBac -1240 318 94 1 1146 1309 92 49 0 chr13 73631105 73631290 -46653022 - B2_Mm2 SINE B2 0 195 2 1 1146 280 303 151 74 chr13 73631290 73631347 -46652965 - Looper DNA PiggyBac -1465 93 27 1 1146 411 349 90 59 chr13 73631631 73631954 -46652358 - MLT1B LTR MaLR -52 338 6 1 1146 438 69 0 0 chr13 73632935 73632993 -46651319 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1146 216 0 0 0 chr13 73633946 73633970 -46650342 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1146 507 268 0 0 chr13 73635960 73636139 -46648173 + (CA)n Simple_repeat Simple_repeat 2 180 0 1 1146 3115 64 10 5 chr13 73639586 73639980 -46644332 - MTA_Mm LTR MaLR 0 396 1 1 1146 225 0 0 0 chr13 73640308 73640333 -46643979 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1146 747 206 234 0 chr13 73641151 73641326 -46642986 - B3 SINE B2 0 216 1 1 1146 594 195 17 17 chr13 73641455 73641575 -46642737 + PB1D9 SINE Alu 1 120 0 1 1146 183 114 0 0 chr13 73642661 73642696 -46641616 + (TGAG)n Simple_repeat Simple_repeat 4 38 0 1 1146 259 288 16 33 chr13 73642699 73642821 -46641491 + (TATG)n Simple_repeat Simple_repeat 2 121 0 1 1146 324 205 86 0 chr13 73644376 73644493 -46639819 + Lx7 LINE L1 7570 7696 0 1 1146 347 188 29 38 chr13 73644498 73644603 -46639709 - Lx9 LINE L1 -7 7637 7534 1 1146 580 179 9 9 chr13 73644616 73644723 -46639589 - B1_Mus2 SINE Alu -2 145 39 1 1146 420 37 0 0 chr13 73644744 73644798 -46639514 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1146 4639 196 40 30 chr13 73644800 73645829 -46638483 - Lx9 LINE L1 -170 7474 6436 1 1146 189 0 0 0 chr13 73647925 73647946 -46636366 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2 1146 395 127 0 5 chr13 73647960 73648025 -46636287 - B2_Mm2 SINE B2 -107 109 47 2 1146 1266 118 0 6 chr13 73648070 73648249 -46636063 - B2_Mm1t SINE B2 -14 179 2 2 1146 1021 265 69 44 chr13 73648879 73649199 -46635113 - MTEb LTR MaLR -2 377 50 2 1146 2359 102 6 0 chr13 73649265 73649590 -46634722 + ORR1A2 LTR MaLR 1 327 0 2 1146 268 232 0 0 chr13 73649607 73649663 -46634649 - MTEa LTR MaLR 0 379 324 2 1146 558 223 154 0 chr13 73649671 73649801 -46634511 + B3A SINE B2 6 155 -43 2 1146 377 116 0 14 chr13 73649814 73649884 -46634428 + (CATA)n Simple_repeat Simple_repeat 4 72 0 2 1146 959 232 175 12 chr13 73649894 73650134 -46634178 - MTEa LTR MaLR -45 334 56 2 1146 690 225 130 31 chr13 73654097 73654358 -46629954 + B4 SINE B4 2 288 -4 2 1146 3334 130 77 65 chr13 73654376 73655010 -46629302 + RLTR26 LTR ERVK 1 642 0 2 1146 1054 132 92 0 chr13 73655146 73655321 -46628991 - B2_Mm2 SINE B2 -13 203 1 2 1146 477 258 101 53 chr13 73655335 73655523 -46628789 - B3A SINE B2 0 198 2 2 1146 645 194 111 7 chr13 73655605 73655740 -46628572 - B1_Mur1 SINE Alu 0 149 1 2 1146 230 221 101 46 chr13 73657878 73657987 -46626325 + L1MEc LINE L1 1267 1381 -5127 2 1146 1473 60 0 0 chr13 73658073 73658488 -46625824 + (CA)n Simple_repeat Simple_repeat 1 415 0 2 1146 320 265 77 47 chr13 73658798 73658968 -46625344 + L1MEc LINE L1 1630 1804 -4537 2 1146 357 323 106 30 chr13 73659001 73659036 -46625276 + L1MEc LINE L1 2078 2119 -4283 2 1146 720 222 14 7 chr13 73659036 73659181 -46625131 + B1_Mus1 SINE Alu 1 146 -2 2 1146 357 323 106 30 chr13 73659181 73659410 -46624902 + L1MEc LINE L1 2120 2361 -4041 2 1146 371 305 164 47 chr13 73660029 73660524 -46623788 + L1MEc LINE L1 587 1139 -5261 2 1146 1270 112 18 13 chr13 73660526 73660753 -46623559 - Lx4B LINE L1 -2225 3652 3425 2 1146 11728 137 13 84 chr13 73660753 73661330 -46622982 + Lx4B LINE L1 3657 4165 -1712 2 1146 399 97 362 19 chr13 73661330 73661435 -46622877 - B2_Mm2 SINE B2 -8 187 47 2 1146 11728 137 13 84 chr13 73661435 73661492 -46622820 + Lx4B LINE L1 4166 4217 -1660 2 1146 1213 89 53 0 chr13 73661492 73661661 -46622651 - B2_Mm1t SINE B2 -14 179 2 2 143 11728 144 51 54 chr13 73661661 73664346 -46619966 + Lx4B LINE L1 4218 7042 -16 2 1147 306 0 0 0 chr13 73664346 73664380 -46619932 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 2 1147 6614 155 111 7 chr13 73664380 73664393 -46619919 + Lx4B LINE L1 7043 7055 -3 2 1147 208 246 0 0 chr13 73664402 73664459 -46619853 + A-rich Low_complexity Low_complexity 1 57 0 2 1147 529 350 76 9 chr13 73665634 73665859 -46618453 + RMER15 LTR ERVL 336 575 0 2 1147 468 0 0 0 chr13 73666065 73666117 -46618195 - ORR1C2 LTR MaLR 0 384 333 2 1147 3934 247 30 72 chr13 73666163 73667280 -46617032 - Lx5 LINE L1 -60 6990 5920 2 1147 531 151 11 15 chr13 73667281 73667382 -46616930 - ORR1C2 LTR MaLR -41 343 189 2 1147 732 23 0 0 chr13 73667393 73667479 -46616833 + (GGGAGA)n Simple_repeat Simple_repeat 6 91 0 2 1147 1972 151 24 50 chr13 73667527 73667877 -46616435 - ORR1B2 LTR MaLR 0 367 17 2 1147 1491 82 0 5 chr13 73667877 73668073 -46616239 - B2_Mm2 SINE B2 0 195 1 2 1147 1972 151 24 50 chr13 73668073 73668099 -46616213 - ORR1B2 LTR MaLR -351 16 1 2 1147 216 0 0 0 chr13 73668130 73668154 -46616158 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2 1147 180 0 0 0 chr13 73668253 73668273 -46616039 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 2 1147 1199 236 189 3 chr13 73668280 73668577 -46615735 - Lx6 LINE L1 -177 7283 6932 2 1147 1983 166 104 5 chr13 73668580 73668956 -46615356 - MTC LTR MaLR -8 413 1 2 1147 4798 151 185 52 chr13 73668956 73670066 -46614246 - MTC-int LTR MaLR 0 1258 2 2 1147 2185 128 79 22 chr13 73670142 73670511 -46613801 - MTC LTR MaLR -31 390 1 2 1147 1879 201 61 13 chr13 73670511 73670912 -46613400 - Lx6 LINE L1 -1071 6625 6206 2 1147 198 0 0 0 chr13 73670912 73670934 -46613378 + (CA)n Simple_repeat Simple_repeat 2 23 0 2 1147 1558 234 108 16 chr13 73670934 73670966 -46613346 - Lx6 LINE L1 -1491 6205 6152 2 1147 2306 222 77 27 chr13 73671698 73672113 -46612199 - RLTR40 LTR ERVK -13 804 298 2 1147 423 0 0 0 chr13 73672113 73672160 -46612152 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1147 2306 198 88 16 chr13 73672160 73672427 -46611885 - RLTR40 LTR ERVK -520 297 13 2 1147 1131 206 59 66 chr13 73676376 73676647 -46607665 + B4 SINE B4 3 271 -21 2 1147 580 87 0 21 chr13 73677111 73677205 -46607107 + (TCCC)n Simple_repeat Simple_repeat 1 92 0 2 1147 234 324 13 39 chr13 73677206 73677283 -46607029 - ID4_ SINE ID 0 83 9 2 1147 266 361 24 39 chr13 73677299 73677426 -46606886 - PB1 SINE Alu -2 125 1 2 1147 202 194 77 0 chr13 73678738 73678893 -46605419 + (TCTA)n Simple_repeat Simple_repeat 3 169 0 2 1147 263 320 50 10 chr13 73680318 73680419 -46603893 + PB1D10 SINE Alu 9 113 -4 2 1147 543 31 0 0 chr13 73680866 73680931 -46603381 + (TC)n Simple_repeat Simple_repeat 2 66 0 2 1147 519 110 0 0 chr13 73681339 73681412 -46602900 - RLTR9B2 LTR ERVK -3 417 345 2 1147 211 346 0 29 chr13 73683124 73683228 -46601084 + (TATG)n Simple_repeat Simple_repeat 4 104 0 2 1147 393 253 12 12 chr13 73683606 73683690 -46600622 + PB1D10 SINE Alu 13 96 -21 2 1147 14850 134 42 36 chr13 73683963 73687514 -46596798 - Lx5 LINE L1 -11 7039 3442 2 1147 1113 65 0 0 chr13 73687514 73687653 -46596659 - B1_Mus1 SINE Alu -9 139 1 2 1147 14850 126 41 48 chr13 73687653 73687904 -46596408 - Lx5 LINE L1 -2436 3441 3199 2 1147 244 291 0 0 chr13 73689160 73689215 -46595097 - ID4_ SINE ID -20 63 9 2 1147 658 197 17 0 chr13 73689215 73689332 -46594980 + MTC LTR MaLR 1 119 -302 2 1147 450 242 20 10 chr13 73689343 73689443 -46594869 + PB1 SINE Alu 1 101 -26 2 1147 236 256 68 8 chr13 73689502 73689620 -46594692 - L1MEc LINE L1 -3561 2758 2634 2 1147 332 0 47 0 chr13 73689627 73689670 -46594642 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2 1147 337 139 0 226 chr13 73689679 73689781 -46594531 - RSINE1 SINE B4 0 165 87 2 1147 456 19 0 0 chr13 73689804 73689857 -46594455 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1147 280 268 146 42 chr13 73689918 73690283 -46594029 - L1MEc LINE L1 -3732 2587 2187 2 1147 191 241 18 53 chr13 73691091 73691148 -46593164 - L3 LINE CR1 -1246 3243 3189 2 1147 384 296 0 0 chr13 73691159 73691247 -46593065 - PB1D10 SINE Alu -9 108 21 2 1147 323 252 210 10 chr13 73691877 73691977 -46592335 + MIRm SINE MIR 34 153 -123 2 1147 246 322 67 26 chr13 73692314 73692541 -46591771 + RLTR21 LTR ERVK 1083 1254 -318 2 1147 338 268 0 0 chr13 73692521 73692592 -46591720 - B4A SINE B4 -2 290 220 2 1147 1052 280 23 60 chr13 73692608 73692633 -46591679 - B4A SINE B4 0 292 271 2 1147 378 61 0 0 chr13 73692633 73692682 -46591630 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1147 1052 280 23 60 chr13 73692682 73692956 -46591356 - B4A SINE B4 -22 270 4 2 1147 1225 48 0 0 chr13 73696124 73696271 -46588041 + B1_Mm SINE Alu 1 147 0 2 1147 225 128 0 0 chr13 73696274 73696321 -46587991 + (A)n Simple_repeat Simple_repeat 1 47 0 2 1147 414 0 0 0 chr13 73697149 73697195 -46587117 + (TGGA)n Simple_repeat Simple_repeat 1 46 0 2 1147 464 301 0 61 chr13 73698562 73698693 -46585619 - B1F SINE Alu 0 149 27 2 1147 362 235 22 45 chr13 73700519 73700646 -46583666 - MLT1A1 LTR MaLR 0 408 238 2 1147 233 353 35 0 chr13 73700748 73700833 -46583479 - ORR1D2 LTR MaLR -3 367 280 2 1147 685 250 107 0 chr13 73701263 73701431 -46582881 + B4 SINE B4 1 186 -106 2 1147 220 398 24 16 chr13 73701350 73701475 -46582837 + FAM SINE Alu 148 273 -38 2 1147 234 297 127 0 chr13 73703162 73703280 -46581032 - MLT1A1 LTR MaLR -250 161 29 2 1147 369 0 0 0 chr13 73703433 73703474 -46580838 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1147 516 59 0 0 chr13 73703474 73703541 -46580771 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 1147 230 56 0 27 chr13 73706663 73706700 -46577612 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1147 261 0 0 0 chr13 73706723 73706752 -46577560 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1147 836 198 152 8 chr13 73706755 73706999 -46577313 + L1MB3 LINE L1 5801 6079 -104 2 1147 207 0 0 0 chr13 73707495 73707518 -46576794 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1147 891 85 114 8 chr13 73707518 73707640 -46576672 - B1_Mus2 SINE Alu -9 138 2 2 1147 473 0 18 0 chr13 73709231 73709288 -46575024 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1147 987 40 0 0 chr13 73710046 73710170 -46574142 + (TAGA)n Simple_repeat Simple_repeat 1 124 0 2 1147 198 0 0 0 chr13 73711110 73711132 -46573180 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1147 1088 75 0 0 chr13 73711215 73711348 -46572964 + B1_Mus2 SINE Alu 1 133 -14 2 1147 266 0 29 0 chr13 73711349 73711383 -46572929 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 2 1147 920 184 0 7 chr13 73711437 73711585 -46572727 + B1_Mur4 SINE Alu 3 149 -1 2 1147 332 309 32 16 chr13 73711894 73712019 -46572293 - L1MEc LINE L1 -5309 1091 965 2 1147 279 0 0 0 chr13 73712064 73712095 -46572217 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1147 210 238 0 0 chr13 73712199 73712241 -46572071 + (CATG)n Simple_repeat Simple_repeat 1 42 0 2 1147 862 282 59 9 chr13 73712312 73712534 -46571778 - B4 SINE B4 -59 233 1 2 1147 700 233 14 7 chr13 73712553 73712700 -46571612 - B1_Mur1 SINE Alu -1 148 1 2 1147 434 273 108 23 chr13 73713037 73713213 -46571099 - L1MEc LINE L1 -6168 232 42 2 1147 210 37 0 0 chr13 73714313 73714340 -46569972 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1147 253 247 133 56 chr13 73714340 73714430 -46569882 - PB1D10 SINE Alu -11 106 10 2 1147 1413 118 22 26 chr13 73716681 73716908 -46567404 - URR1A DNA MER1_type 0 226 1 2 1147 255 299 46 18 chr13 73718522 73718631 -46565681 + LTR16A1 LTR ERVL 273 384 -72 2 1147 522 0 0 0 chr13 73718756 73718814 -46565498 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1147 489 314 58 7 chr13 73719033 73719171 -46565141 - RSINE1 SINE B4 -19 146 2 2 1147 269 211 82 72 chr13 73719220 73719317 -46564995 + MLT1C LTR MaLR 140 237 -230 2 1147 876 175 216 0 chr13 73719326 73719497 -46564815 - B3 SINE B2 -8 208 1 2 1147 1531 249 165 20 chr13 73719529 73719638 -46564674 - Lx8 LINE L1 -4 7469 7340 2 1147 360 0 0 0 chr13 73719638 73719678 -46564634 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1147 1531 249 165 20 chr13 73719678 73720125 -46564187 - Lx8 LINE L1 -134 7339 6834 2 1147 659 247 163 48 chr13 73720123 73720412 -46563900 - Lx9 LINE L1 -318 7326 7005 2 1147 8000 80 14 7 chr13 73720396 73721506 -46562806 + L1_Mus3 LINE L1 5581 6638 0 3 1147 1110 249 8 12 chr13 73721536 73721788 -46562524 - Lx9 LINE L1 -644 7000 6750 3 1147 301 177 114 0 chr13 73721808 73721887 -46562425 - Lx9 LINE L1 -2 7642 7555 3 1147 1320 298 28 28 chr13 73721902 73722324 -46561988 - Lx9 LINE L1 -898 6746 6325 3 1147 255 241 0 0 chr13 73722541 73722595 -46561717 + Lx9 LINE L1 7385 7438 -206 3 1147 396 0 0 0 chr13 73722609 73722653 -46561659 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1147 792 257 9 26 chr13 73722838 73723066 -46561246 - Lx8 LINE L1 -650 6823 6600 3 1147 1277 261 35 8 chr13 73723219 73723586 -46560726 - Lx8 LINE L1 -849 6624 6248 3 1147 604 175 106 45 chr13 73723653 73723677 -46560635 - Lx2B LINE L1 -4 7054 7037 3 1147 438 20 0 0 chr13 73723677 73723728 -46560584 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 3 1147 1162 221 53 44 chr13 73723728 73724115 -46560197 - Lx2B LINE L1 -22 7036 6548 3 1147 606 135 0 0 chr13 73724692 73724796 -46559516 + (TGGA)n Simple_repeat Simple_repeat 3 106 0 3 1147 503 327 0 24 chr13 73724844 73725010 -46559302 + (TGGG)n Simple_repeat Simple_repeat 2 163 0 3 1147 588 277 17 6 chr13 73726268 73726446 -46557866 + Lx8 LINE L1 6954 7133 -340 3 1147 1251 54 0 0 chr13 73726477 73726624 -46557688 + B1_Mm SINE Alu 1 147 0 3 1147 367 282 27 27 chr13 73726701 73726847 -46557465 + Lx8 LINE L1 7187 7332 -141 3 1147 693 134 0 0 chr13 73727836 73727948 -46556364 + (GGAA)n Simple_repeat Simple_repeat 4 115 0 3 1147 193 232 129 14 chr13 73728043 73728113 -46556199 + L3 LINE CR1 1715 1792 -2697 3 1147 2567 80 6 6 chr13 73728523 73728850 -46555462 + ORR1A2 LTR MaLR 1 327 0 3 1147 897 272 73 76 chr13 73728997 73729351 -46554961 + ORR1E LTR MaLR 1 353 -6 3 1147 1467 74 16 0 chr13 73729436 73729625 -46554687 - B2_Mm2 SINE B2 -2 193 2 3 1147 269 338 81 0 chr13 73730966 73731102 -46553210 + L1MC4a LINE L1 6345 6491 -1391 3 1147 311 193 34 67 chr13 73731168 73731257 -46553055 + PB1 SINE Alu 38 123 -4 3 1147 450 0 0 0 chr13 73731321 73731371 -46552941 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1147 245 289 97 0 chr13 73732175 73732289 -46552023 + L1MC4a LINE L1 7757 7881 -1 3 1147 465 272 104 83 chr13 73732389 73732766 -46551546 + MLT1C LTR MaLR 6 367 -23 3 1147 307 321 164 23 chr13 73733219 73733567 -46550745 - L1MC LINE L1 -1001 5145 4749 3 1147 277 235 127 102 chr13 73733580 73733720 -46550592 + MTEa LTR MaLR 1 138 -241 3 1147 225 208 56 159 chr13 73734882 73735008 -46549304 - LTR9 LTR ERV1 -431 181 69 3 1147 631 306 124 46 chr13 73735228 73735574 -46548738 - MER21B LTR ERV1 -72 791 419 3 1147 1271 281 25 27 chr13 73735703 73736079 -46548233 - MTE2b LTR MaLR -1 420 37 3 1147 198 171 0 0 chr13 73737496 73737537 -46546775 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 3 1147 307 222 0 0 chr13 73737584 73737638 -46546674 - B3A SINE B2 -119 79 26 3 1147 1330 102 16 16 chr13 73737903 73738093 -46546219 + B2_Mm2 SINE B2 2 191 -4 3 1147 1336 11 7 18 chr13 73738264 73738550 -46545762 + (GTGTG)n Simple_repeat Simple_repeat 1 282 0 3 1147 1552 174 215 3 chr13 73739561 73739900 -46544412 + MTD LTR MaLR 1 411 -8 3 1147 3183 141 90 13 chr13 73740257 73740803 -46543509 + Lx5 LINE L1 6458 7045 -5 3 1147 307 208 93 10 chr13 73740827 73740924 -46543388 + Lx4B LINE L1 6950 7054 -4 3 1147 24 0 0 0 chr13 73741564 73741588 -46542724 + GC_rich Low_complexity Low_complexity 1 24 0 3 1147 22 35 0 0 chr13 73741643 73741672 -46542640 + GC_rich Low_complexity Low_complexity 1 29 0 3 1147 336 314 19 10 chr13 73743519 73743535 -46540777 + ID_B1 SINE B4 73 176 -48 3 1147 432 221 0 11 chr13 73743535 73743622 -46540690 + PB1D10 SINE Alu 10 95 -22 3 1147 351 326 22 0 chr13 73744318 73744407 -46539905 + B1F SINE Alu 1 91 -58 3 1147 262 278 0 58 chr13 73745864 73745950 -46538362 - BC1_Mm scRNA scRNA -2 81 2 3 1147 22 0 0 0 chr13 73745952 73745974 -46538338 + AT_rich Low_complexity Low_complexity 1 22 0 3 1147 1165 88 57 34 chr13 73758172 73758349 -46525963 + B2_Mm2 SINE B2 1 181 -14 3 1147 198 0 0 0 chr13 73758349 73758371 -46525941 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1147 249 345 108 28 chr13 73759278 73759454 -46524858 - MLT1D LTR MaLR -55 450 261 3 1147 395 244 43 13 chr13 73759862 73759969 -46524343 + PB1 SINE Alu 14 116 -1 3 1147 3319 61 2 0 chr13 73760839 73761234 -46523078 + MTA_Mm LTR MaLR 1 396 0 3 1147 479 271 85 0 chr13 73761317 73761435 -46522877 + ID_B1 SINE B4 97 224 0 3 1147 535 281 22 0 chr13 73762933 73763068 -46521244 - ID_B1 SINE B4 -1 223 86 3 1147 1695 118 128 181 chr13 73766432 73766886 -46517426 - RLTR23 LTR ERV1 0 430 1 3 1147 609 141 62 69 chr13 73767506 73767651 -46516661 + B1_Mm SINE Alu 2 145 -2 3 1147 772 203 7 7 chr13 73767668 73767812 -46516500 + B1_Mur4 SINE Alu 3 146 -4 3 1147 1167 75 7 0 chr13 73768788 73768934 -46515378 + B1_Mus1 SINE Alu 2 148 0 3 1147 569 290 8 0 chr13 73768939 73769070 -46515242 - B1_Mur1 SINE Alu -17 132 1 3 1147 245 274 71 0 chr13 73769171 73769255 -46515057 - PB1 SINE Alu -20 107 18 3 1147 1295 82 0 12 chr13 73769368 73769540 -46514772 + B2_Mm2 SINE B2 1 170 -25 3 1147 26 0 0 0 chr13 73769540 73769566 -46514746 + AT_rich Low_complexity Low_complexity 1 26 0 3 1147 471 141 0 0 chr13 73769672 73769750 -46514562 + (TCCC)n Simple_repeat Simple_repeat 4 81 0 3 1147 941 185 19 61 chr13 73769800 73770013 -46514299 - B3 SINE B2 -10 206 3 3 1147 234 0 0 0 chr13 73770026 73770052 -46514260 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 3 1147 1198 43 0 0 chr13 73770052 73770190 -46514122 - B1_Mus1 SINE Alu -9 139 2 3 1147 761 177 214 39 chr13 73770504 73770686 -46513626 - B3 SINE B2 -1 215 2 3 1147 641 260 294 9 chr13 73771011 73771232 -46513080 - B4A SINE B4 -8 284 1 3 1147 419 294 13 19 chr13 73771232 73771388 -46512924 - RMER5 LTR ERV1 -265 269 115 3 1147 1022 153 0 0 chr13 73772269 73772419 -46511893 - B1_Mur4 SINE Alu 0 150 1 3 1147 335 347 32 8 chr13 73775440 73775565 -46508747 - L1M5 LINE L1 -3123 3023 2896 3 1147 270 0 0 0 chr13 73775596 73775626 -46508686 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1147 1236 68 0 0 chr13 73775626 73775774 -46508538 - B1_Mus1 SINE Alu 0 148 1 3 1147 350 250 50 0 chr13 73776054 73776134 -46508178 + B1F SINE Alu 14 97 -52 3 1147 309 278 0 65 chr13 73777963 73778043 -46506269 + L1_Rod LINE L1 3784 3856 -1991 3 1147 1389 58 0 0 chr13 73778043 73778216 -46506096 + L1Md_T LINE L1 6409 6581 -1 3 1147 309 278 0 65 chr13 73778216 73778258 -46506054 + L1_Rod LINE L1 3857 3898 -1949 3 1147 450 0 0 0 chr13 73779926 73779976 -46504336 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1147 23 33 0 0 chr13 73785571 73785601 -46498711 + GC_rich Low_complexity Low_complexity 1 30 0 3 1147 252 0 0 0 chr13 73786210 73786238 -46498074 + (TGG)n Simple_repeat Simple_repeat 2 29 0 3 1147 327 163 715 26 chr13 73786885 73787003 -46497309 - ORR1D1 LTR MaLR 0 374 176 3 1147 543 16 0 0 chr13 73787005 73787069 -46497243 + (GA)n Simple_repeat Simple_repeat 2 65 0 3 1147 511 279 41 0 chr13 73787355 73787477 -46496835 - B1_Mur4 SINE Alu -22 128 2 3 1147 399 41 0 0 chr13 73787688 73787737 -46496575 + (TTCC)n Simple_repeat Simple_repeat 2 50 0 3 1147 1076 44 73 0 chr13 73787771 73787908 -46496404 + B1_Mus2 SINE Alu 1 147 0 3 1147 2630 182 54 0 chr13 73787921 73788405 -46495907 - Lx6 LINE L1 -21 7439 6930 3 1147 2774 203 22 25 chr13 73788408 73788958 -46495354 - Lx6 LINE L1 -736 6724 6177 3 1147 266 79 0 0 chr13 73789463 73789501 -46494811 + B2_Mm2 SINE B2 1 38 -157 3 1147 318 196 105 155 chr13 73789749 73789827 -46494485 + RLTR13D3 LTR ERVK 943 1009 -105 3 1147 1724 26 0 0 chr13 73789827 73790020 -46494292 - B2_Mm1a SINE B2 0 193 1 3 1147 318 196 105 155 chr13 73790020 73790122 -46494190 + RLTR13D3 LTR ERVK 1010 1114 0 3 1147 2442 191 44 16 chr13 73790122 73790771 -46493541 - Lx6 LINE L1 -1278 6182 5514 3 1147 734 197 66 0 chr13 73790782 73790919 -46493393 - ORR1D1 LTR MaLR -227 147 2 3 1147 3886 221 88 41 chr13 73790920 73791013 -46493299 - ORR1D1-int LTR MaLR 0 1370 1271 3 1147 430 200 410 0 chr13 73791013 73791108 -46493204 + B1_Mus1 SINE Alu 2 135 -13 3 1147 3886 221 88 41 chr13 73791108 73791811 -46492501 - ORR1D1-int LTR MaLR -100 1270 526 3 1147 1189 68 0 0 chr13 73791811 73791958 -46492354 - B1_Mm SINE Alu 0 147 1 3 1147 3886 221 88 41 chr13 73791958 73792145 -46492167 - ORR1D1-int LTR MaLR -891 618 342 3 1147 1356 41 41 0 chr13 73792145 73792314 -46491998 + B2_Mm1t SINE B2 4 179 -14 3 1147 2883 280 93 90 chr13 73792314 73792832 -46491480 - ORR1D1-int LTR MaLR -1034 475 1 3 1147 1755 190 58 19 chr13 73792832 73793192 -46491120 - ORR1D1 LTR MaLR 0 374 1 3 1147 448 282 54 15 chr13 73793195 73793400 -46490912 + L1M2 LINE L1 4424 4636 -1507 3 143 730 194 0 8 chr13 73793415 73793540 -46490772 + B1_Mus1 SINE Alu 2 125 -23 3 1148 2829 221 51 46 chr13 73793548 73794396 -46489916 + Lx9 LINE L1 4960 5818 -29 3 1148 2791 89 88 9 chr13 73794396 73794816 -46489496 + RLTR11B LTR ERVK 1 453 0 3 1148 2829 247 30 52 chr13 73794816 73794969 -46489343 + Lx9 LINE L1 5819 5997 -1647 3 1148 378 0 0 0 chr13 73795290 73795332 -46488980 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1148 1504 111 0 0 chr13 73795406 73795623 -46488689 + RMER6A LTR ERVK 1 217 -539 3 1148 872 270 100 16 chr13 73795625 73795945 -46488367 + Lx9 LINE L1 6924 7270 -374 3 1148 1272 14 0 0 chr13 73797154 73797300 -46487012 + (TC)n Simple_repeat Simple_repeat 1 146 0 3 1148 376 252 54 45 chr13 73797302 73797414 -46486898 + B4 SINE B4 106 218 -74 3 1148 1901 195 95 13 chr13 73797445 73797834 -46486478 + MTC LTR MaLR 1 421 0 3 1148 2198 142 25 6 chr13 73798036 73798396 -46485916 + ORR1B2 LTR MaLR 1 367 0 3 1148 2153 147 106 3 chr13 73798478 73798846 -46485466 - MTC LTR MaLR 0 421 16 3 1148 291 313 61 66 chr13 73798848 73799060 -46485252 + MLT1D LTR MaLR 1 211 -294 3 1148 2092 24 0 19 chr13 73799129 73799390 -46484922 + L1_Mus1 LINE L1 5596 5851 -716 3 1148 1152 150 61 33 chr13 73802535 73802749 -46481563 - URR1B DNA MER1_type 0 225 6 3 1148 3099 67 20 10 chr13 73803256 73803651 -46480661 + MTB LTR MaLR 2 400 0 3 1148 315 0 0 0 chr13 73804627 73804662 -46479650 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1148 2136 305 77 9 chr13 73806007 73806672 -46477640 + MTE-int LTR MaLR 827 1536 -44 4 1148 468 0 0 0 chr13 73806792 73806844 -46477468 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1148 248 208 110 61 chr13 73806910 73806992 -46477320 + MTEb LTR MaLR 294 379 0 4 1148 286 256 116 116 chr13 73807071 73807261 -46477051 - MLT1C LTR MaLR -273 194 5 4 1148 754 199 134 27 chr13 73808184 73808370 -46475942 + B3 SINE B2 1 206 -10 4 1148 25 65 0 0 chr13 73808376 73808422 -46475890 + AT_rich Low_complexity Low_complexity 1 46 0 4 1148 255 289 0 0 chr13 73809410 73809538 -46474774 + (TA)n Simple_repeat Simple_repeat 2 129 0 4 1148 552 197 0 43 chr13 73809597 73809783 -46474529 + (TA)n Simple_repeat Simple_repeat 2 179 0 4 1148 402 21 0 0 chr13 73812251 73812298 -46472014 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1148 1040 301 38 15 chr13 73812299 73812562 -46471750 - B4 SINE B4 -23 269 1 4 1148 845 305 34 54 chr13 73813545 73813840 -46470472 + B4 SINE B4 4 292 0 4 1148 1170 100 78 0 chr13 73814011 73814191 -46470121 - B2_Mm2 SINE B2 0 195 2 4 1148 204 97 0 0 chr13 73818582 73818613 -46465699 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4 1148 364 299 11 43 chr13 73818663 73818848 -46465464 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 4 1148 335 159 29 0 chr13 73820852 73820921 -46463391 + (TATG)n Simple_repeat Simple_repeat 2 72 0 4 1148 3282 241 83 48 chr13 73821909 73822987 -46461325 + Lx9 LINE L1 6485 7600 -44 4 1148 237 309 98 29 chr13 73824839 73825012 -46459300 + L1MB5 LINE L1 5477 5661 -517 4 1148 264 282 14 0 chr13 73825303 73825374 -46458938 + L1MB5 LINE L1 6047 6118 -56 4 1148 493 308 8 0 chr13 73828285 73828415 -46455897 - B1F SINE Alu 0 149 19 4 1148 244 232 36 0 chr13 73828423 73828479 -46455833 + C-rich Low_complexity Low_complexity 6 63 0 4 1148 237 197 0 0 chr13 73828499 73828560 -46455752 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1148 1127 265 24 34 chr13 73828595 73828888 -46455424 - B4 SINE B4 -1 291 2 4 1148 206 277 12 12 chr13 73829737 73829821 -46454491 + G-rich Low_complexity Low_complexity 4 87 0 4 1148 350 248 70 70 chr13 73831266 73831310 -46453002 + L1MEg LINE L1 1797 1836 -4248 4 1148 869 261 23 14 chr13 73831310 73831524 -46452788 + B3 SINE B2 1 216 0 4 1148 350 248 70 70 chr13 73831524 73831541 -46452771 + L1MEg LINE L1 1837 1854 -4230 4 1148 580 186 153 0 chr13 73831541 73831665 -46452647 + B1_Mur3 SINE Alu 1 143 -6 4 1148 350 248 70 70 chr13 73831665 73831758 -46452554 + L1MEg LINE L1 1855 1952 -4132 4 1148 704 85 6 56 chr13 73831760 73831922 -46452390 + (GAGAA)n Simple_repeat Simple_repeat 4 157 0 4 1148 754 278 73 26 chr13 73831927 73832415 -46451897 + L1MB3 LINE L1 5176 5705 -475 4 1148 270 251 230 0 chr13 73832556 73832743 -46451569 + L1MB3 LINE L1 5944 6173 -10 4 1148 872 66 231 50 chr13 73832885 73833045 -46451267 + B2_Mm2 SINE B2 1 189 -6 4 1148 372 347 6 6 chr13 73833644 73833818 -46450494 + GA-rich Low_complexity Low_complexity 2 175 0 4 1148 1230 48 0 0 chr13 73835406 73835552 -46448760 - B1_Mus2 SINE Alu 0 147 2 4 1148 1102 75 0 40 chr13 73835579 73835731 -46448581 + B1_Mm SINE Alu 2 147 0 4 1148 468 0 0 0 chr13 73835840 73835892 -46448420 + (TCTCCC)n Simple_repeat Simple_repeat 1 52 0 4 1148 468 0 0 0 chr13 73835894 73835946 -46448366 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1148 351 0 0 0 chr13 73837055 73837094 -46447218 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1148 322 330 93 75 chr13 73839631 73840007 -46444305 + L1MEg LINE L1 866 1248 -4836 4 1148 2674 88 8 19 chr13 73840773 73841142 -46443170 - RLTR8 LTR ERVK 0 365 1 4 1148 24 32 0 0 chr13 73841703 73841734 -46442578 + AT_rich Low_complexity Low_complexity 1 31 0 4 1148 251 217 16 32 chr13 73842888 73842950 -46441362 - L1ME3 LINE L1 -60 6102 6042 4 1148 436 292 138 31 chr13 73843319 73843478 -46440834 + ID_B1 SINE B4 1 176 -48 4 1148 433 297 30 0 chr13 73843390 73843491 -46440821 + PB1D10 SINE Alu 7 110 -7 4 1148 315 0 0 0 chr13 73844532 73844567 -46439745 + (TC)n Simple_repeat Simple_repeat 1 35 0 4 1148 500 277 44 69 chr13 73844626 73844785 -46439527 + RSINE1 SINE B4 4 158 -7 4 1148 527 215 0 61 chr13 73844820 73844934 -46439378 - ORR1D2 LTR MaLR -9 361 255 4 1148 1793 177 181 39 chr13 73844948 73845457 -46438855 - RMER4B LTR ERVK -3 582 1 4 1148 548 154 0 9 chr13 73851098 73851203 -46433109 + CT-rich Low_complexity Low_complexity 3 106 0 4 1148 1060 124 0 11 chr13 73851204 73851384 -46432928 + (TCC)n Simple_repeat Simple_repeat 1 178 0 4 1148 282 309 0 12 chr13 73851386 73851468 -46432844 + CT-rich Low_complexity Low_complexity 1 81 0 4 1148 2209 148 75 28 chr13 73851856 73852245 -46432067 - MTB_Mm LTR MaLR 0 407 1 4 1148 318 286 47 23 chr13 73852536 73852708 -46431604 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 4 1148 1271 41 0 0 chr13 73852812 73852958 -46431354 + B1_Mus2 SINE Alu 1 146 -1 4 1148 1668 42 0 0 chr13 73852959 73853152 -46431160 + B2_Mm1a SINE B2 1 193 0 4 1148 1304 109 15 20 chr13 73853164 73853360 -46430952 + B2_Mm2 SINE B2 1 195 0 4 1148 1017 161 86 0 chr13 73854459 73854633 -46429679 - ORR1B1 LTR MaLR 0 394 206 4 1148 296 54 0 0 chr13 73854752 73854789 -46429523 - MT2A LTR ERVL -496 37 1 4 1148 1296 190 82 12 chr13 73854789 73855044 -46429268 - MTD LTR MaLR -56 363 91 4 1148 355 250 0 13 chr13 73855471 73855548 -46428764 + RSINE1 SINE B4 76 151 -14 4 1148 333 0 0 0 chr13 73855550 73855587 -46428725 + (TC)n Simple_repeat Simple_repeat 1 37 0 4 1148 216 0 0 0 chr13 73855587 73855610 -46428702 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1148 455 33 16 0 chr13 73855613 73855674 -46428638 + (TAAA)n Simple_repeat Simple_repeat 1 62 0 4 1148 405 0 0 0 chr13 73856172 73856217 -46428095 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1148 2198 231 83 43 chr13 73856229 73856952 -46427360 + RLTR40 LTR ERVK 19 770 -47 4 1148 3440 104 76 22 chr13 73856985 73857334 -46426978 + RMER2 LTR ERV1 1 368 -199 4 1148 405 0 0 0 chr13 73857334 73857379 -46426933 + (CA)n Simple_repeat Simple_repeat 1 45 0 4 1148 3440 104 76 22 chr13 73857379 73857567 -46426745 + RMER2 LTR ERV1 369 566 -1 4 1148 467 302 0 33 chr13 73857567 73857687 -46426625 - B3A SINE B2 -82 116 1 4 1148 324 356 39 22 chr13 73857767 73857945 -46426367 + L1MC4 LINE L1 7392 7572 -470 4 1148 289 287 71 36 chr13 73857947 73858059 -46426253 + PB1D10 SINE Alu 1 116 -1 4 1148 351 355 7 55 chr13 73858064 73858210 -46426102 + ID_B1 SINE B4 82 220 -4 4 1148 569 272 7 7 chr13 73858233 73858370 -46425942 + B1_Mur1 SINE Alu 11 147 -2 4 1148 342 45 0 0 chr13 73858382 73858426 -46425886 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1148 237 238 0 0 chr13 73858541 73858583 -46425729 + B1F SINE Alu 72 113 -36 4 1148 1394 69 26 5 chr13 73858646 73858835 -46425477 - B2_Mm2 SINE B2 -2 193 1 4 1148 775 273 180 46 chr13 73859001 73859285 -46425027 - MTE2b LTR MaLR 0 379 58 4 1148 250 314 139 0 chr13 73859285 73859371 -46424941 - MTE2b LTR MaLR -281 98 1 4 1148 403 341 36 14 chr13 73859372 73859512 -46424800 + MER5B DNA MER1_type 20 162 -16 4 1148 629 133 10 0 chr13 73859546 73859599 -46424713 + RMER6A LTR ERVK 1 54 -702 4 1148 678 25 0 0 chr13 73859599 73859679 -46424633 + (GAA)n Simple_repeat Simple_repeat 2 81 0 4 1148 629 133 10 0 chr13 73859679 73859723 -46424589 + RMER6A LTR ERVK 55 98 -658 4 1148 1287 113 5 15 chr13 73859721 73859927 -46424385 + RMER6A LTR ERVK 411 614 -142 4 1148 581 178 56 0 chr13 73859933 73860040 -46424272 + B1_Mur1 SINE Alu 23 135 -14 4 1148 648 0 0 0 chr13 73860407 73860479 -46423833 + (CTG)n Simple_repeat Simple_repeat 1 72 0 4 1148 1194 48 14 0 chr13 73861161 73861306 -46423006 + B1_Mm SINE Alu 1 147 0 4 1148 889 126 132 0 chr13 73862182 73862341 -46421971 + B2_Mm2 SINE B2 1 180 -15 4 1148 285 29 0 0 chr13 73862374 73862408 -46421904 + (CAGAGA)n Simple_repeat Simple_repeat 2 35 0 4 1148 1086 73 33 0 chr13 73862409 73862559 -46421753 + B2_Mm2 SINE B2 31 185 -10 4 1148 186 43 0 0 chr13 73862559 73862582 -46421730 + (GGAA)n Simple_repeat Simple_repeat 3 25 0 4 1148 423 0 0 0 chr13 73862713 73862760 -46421552 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1148 333 0 0 0 chr13 73862760 73862797 -46421515 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1148 3920 132 39 14 chr13 73862797 73863507 -46420805 - RMER6A LTR ERVK -4 752 1 4 1148 1437 83 0 25 chr13 73864028 73864226 -46420086 - B2_Mm1t SINE B2 0 193 1 4 1148 1008 257 93 51 chr13 73864226 73864582 -46419730 + RMER5 LTR ERV1 118 488 -46 4 1148 372 272 139 9 chr13 73867277 73867392 -46416920 + B1F SINE Alu 1 130 -19 4 1148 241 289 19 0 chr13 73868020 73868072 -46416240 - B1_Mus1 SINE Alu -93 55 3 4 1148 806 289 79 25 chr13 73868076 73868317 -46415995 + MTEb LTR MaLR 110 363 -16 4 1148 207 238 96 103 chr13 73868806 73868942 -46415370 + L2c LINE L2 3253 3387 0 4 1148 1986 103 66 0 chr13 73868965 73869266 -46415046 - ORR1A4 LTR MaLR -8 321 1 4 1148 582 122 0 10 chr13 73869422 73869521 -46414791 - URR1B DNA MER1_type -45 180 83 4 1148 274 278 25 57 chr13 73870382 73870504 -46413808 + C-rich Low_complexity Low_complexity 1 118 0 4 1148 183 205 0 0 chr13 73870668 73870707 -46413605 + (CCCCAA)n Simple_repeat Simple_repeat 3 41 0 4 1148 345 75 0 0 chr13 73871810 73871863 -46412449 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1148 450 0 0 0 chr13 73875580 73875630 -46408682 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1148 416 162 81 0 chr13 73875832 73875906 -46408406 + ID2 SINE ID 1 80 -3 4 1148 300 219 12 24 chr13 73875911 73875995 -46408317 + L1M5 LINE L1 5354 5436 -743 4 1148 225 147 0 0 chr13 73876001 73876035 -46408277 + ID4 SINE ID 4 37 -46 4 1148 430 272 55 6 chr13 73876090 73876253 -46408059 + L1MB3 LINE L1 5424 5594 -577 5 1148 707 230 26 26 chr13 73876268 73876424 -46407888 + RSINE1 SINE B4 10 165 0 5 1148 1264 41 0 0 chr13 73876911 73877058 -46407254 + B1_Mus2 SINE Alu 1 147 0 5 1148 255 272 186 45 chr13 73877149 73877418 -46406894 + L1MB3 LINE L1 5860 6166 -17 5 1148 775 258 15 88 chr13 73877434 73877638 -46406674 - B3A SINE B2 0 198 10 5 1148 243 0 0 0 chr13 73877727 73877754 -46406558 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1148 468 0 0 0 chr13 73878387 73878439 -46405873 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1148 316 185 171 163 chr13 73878595 73878724 -46405588 + B1F SINE Alu 20 149 0 5 1148 392 221 102 37 chr13 73878781 73878889 -46405423 + PB1D9 SINE Alu 2 116 -4 5 1148 1280 21 0 0 chr13 73880043 73880187 -46404125 + B1_Mm SINE Alu 2 145 -2 5 1148 278 0 54 0 chr13 73883323 73883360 -46400952 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1148 350 61 41 0 chr13 73883360 73883409 -46400903 + ORR1B1 LTR MaLR 337 387 -7 5 1148 581 54 0 59 chr13 73883447 73883565 -46400747 + (CCCTAA)n Simple_repeat Simple_repeat 2 112 0 5 1148 1214 93 21 42 chr13 73883851 73884041 -46400271 - B2_Mm2 SINE B2 -7 188 3 5 1148 226 250 25 50 chr13 73884064 73884144 -46400168 + MLT1A0 LTR MaLR 16 93 -315 5 1148 1890 133 21 126 chr13 73884153 73884202 -46400110 - ORR1B1 LTR MaLR -7 387 354 5 1148 278 0 54 0 chr13 73884202 73884239 -46400073 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1148 1069 67 7 0 chr13 73884239 73884374 -46399938 - B1_Mus1 SINE Alu -11 137 2 5 1148 1890 133 21 126 chr13 73884374 73884711 -46399601 - ORR1B1 LTR MaLR -41 353 42 5 1148 254 286 118 12 chr13 73884824 73884909 -46399403 + MLT1A0 LTR MaLR 271 364 -1 5 1148 1420 205 67 40 chr13 73884955 73885345 -46398967 + MT2A LTR ERVL 1 522 -79 5 1148 216 97 0 0 chr13 73885345 73885376 -46398936 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1148 562 199 45 67 chr13 73885376 73885406 -46398906 + MT2A LTR ERVL 460 489 -44 5 1148 378 136 37 0 chr13 73885406 73885487 -46398825 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 1148 358 71 15 138 chr13 73885521 73885586 -46398726 + HAL1-3A_ME LINE L1 1976 2032 -826 5 1148 585 252 14 22 chr13 73886455 73886593 -46397719 - ID_B1 SINE B4 -5 219 83 5 1148 2090 119 33 79 chr13 73887392 73887822 -46396490 + RMER17C LTR ERVK 1 410 0 5 1148 988 108 95 17 chr13 73888368 73888547 -46395765 - B2_Mm2 SINE B2 -1 194 2 5 1148 2924 98 78 4 chr13 73888880 73889364 -46394948 + RLTR28 LTR ERVL 1 520 -4 5 1148 278 263 33 66 chr13 73890140 73890262 -46394050 - MLT1C LTR MaLR -270 197 80 5 1148 307 360 36 7 chr13 73890488 73890625 -46393687 - L1MD LINE L1 -3224 2922 2782 5 1148 235 315 82 0 chr13 73890914 73890987 -46393325 - ID4 SINE ID -1 82 4 5 1148 1033 43 14 0 chr13 73891367 73891507 -46392805 - B1_Mm SINE Alu 0 147 6 5 1148 471 188 0 82 chr13 73891402 73891524 -46392788 - MT2B LTR ERVL -337 264 153 5 1148 1363 93 0 5 chr13 73891537 73891732 -46392580 + B2_Mm2 SINE B2 2 195 0 5 1148 725 219 99 17 chr13 73891739 73891867 -46392445 + B3 SINE B2 27 162 -54 5 1148 603 40 0 0 chr13 73891867 73891941 -46392371 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 1148 725 219 99 17 chr13 73891941 73891984 -46392328 + B3 SINE B2 163 212 -4 5 1148 252 245 0 0 chr13 73892054 73892107 -46392205 + GA-rich Low_complexity Low_complexity 2 54 0 5 1148 258 32 0 0 chr13 73892251 73892282 -46392030 + (TCCCC)n Simple_repeat Simple_repeat 4 34 0 5 1148 417 39 0 0 chr13 73892364 73892415 -46391897 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1148 634 262 199 10 chr13 73893758 73894070 -46390242 + L1MB3 LINE L1 5709 6079 -104 5 1148 562 209 23 15 chr13 73894181 73894312 -46390000 + B1F2 SINE Alu 10 141 -8 5 1148 207 100 0 0 chr13 73894313 73894343 -46389969 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 5 1148 403 285 67 37 chr13 73894454 73894589 -46389723 - RSINE1 SINE B4 -24 141 3 5 1148 272 104 62 0 chr13 73895454 73895502 -46388810 - Ricksha_c DNA MuDR -1143 905 855 5 1148 542 114 11 0 chr13 73895822 73895910 -46388402 + (TTTTC)n Simple_repeat Simple_repeat 2 90 0 5 1148 337 157 0 5 chr13 73896181 73896246 -46388066 - B2_Mm2 SINE B2 -107 109 47 5 1148 1135 108 11 28 chr13 73896278 73896459 -46387853 - B2_Mm1a SINE B2 -14 179 2 5 1148 999 96 126 6 chr13 73898056 73898223 -46386089 + B2_Mm2 SINE B2 2 188 -7 5 1148 1323 84 16 0 chr13 73898231 73898421 -46385891 + B2_Mm1t SINE B2 1 193 0 5 1148 247 227 89 118 chr13 73898492 73898627 -46385685 + B4 SINE B4 105 235 -57 5 1148 398 53 0 17 chr13 73898634 73898692 -46385620 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1148 673 216 29 7 chr13 73899389 73899529 -46384783 + ID_B1 SINE B4 79 221 -3 5 1148 21 0 0 0 chr13 73901420 73901441 -46382871 + GC_rich Low_complexity Low_complexity 1 21 0 5 1148 678 242 84 25 chr13 73902973 73903093 -46381219 - ID_B1 SINE B4 -5 219 84 5 1148 183 42 0 0 chr13 73903093 73903117 -46381195 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1148 678 242 84 25 chr13 73903117 73903199 -46381113 - ID SINE ID -141 83 5 5 1148 31 68 0 0 chr13 73903397 73903456 -46380856 + AT_rich Low_complexity Low_complexity 1 59 0 5 1148 2100 213 106 17 chr13 73903457 73903974 -46380338 - Lx3B LINE L1 -4 6969 6407 5 1148 22 0 0 0 chr13 73906273 73906295 -46378017 + AT_rich Low_complexity Low_complexity 1 22 0 5 1148 1083 96 0 0 chr13 73908984 73909130 -46375182 - B1_Mus2 SINE Alu 0 147 2 5 1148 202 351 20 20 chr13 73909468 73909619 -46374693 + (TATG)n Simple_repeat Simple_repeat 3 153 0 5 1148 573 112 0 0 chr13 73911781 73911861 -46372451 + B2_Mm2 SINE B2 1 80 -115 5 1148 536 240 125 13 chr13 73912778 73912930 -46371382 - B3 SINE B2 -21 195 27 5 1148 685 210 48 27 chr13 73914025 73914172 -46370140 - B1_Mur4 SINE Alu 0 150 1 5 1148 1255 0 7 0 chr13 73914838 73914984 -46369328 - B1_Mm SINE Alu 0 147 1 5 1148 357 152 47 23 chr13 73915659 73915787 -46368525 + (TCTA)n Simple_repeat Simple_repeat 2 132 0 5 1148 1189 75 0 0 chr13 73915790 73915951 -46368361 - B2_Mm2 SINE B2 -34 161 1 5 1148 266 225 0 12 chr13 73916291 73916372 -46367940 + (TG)n Simple_repeat Simple_repeat 1 80 0 5 1148 641 252 0 13 chr13 73917131 73917280 -46367032 - B1_Mur1 SINE Alu -2 147 1 5 1148 828 62 9 0 chr13 73918223 73918336 -46365976 - B1_Mus1 SINE Alu 0 148 35 5 1148 305 265 81 81 chr13 73918225 73918373 -46365939 - B4 SINE B4 -69 223 76 5 1148 2475 159 80 4 chr13 73918697 73919184 -46365128 - RLTR28 LTR ERVL 0 524 1 5 1148 234 0 0 0 chr13 73920390 73920416 -46363896 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 5 1148 418 275 153 42 chr13 73921408 73921670 -46362642 + RMER20A LTR ERVK 135 425 -91 5 1148 391 235 114 57 chr13 73922927 73923067 -46361245 - B1F1 SINE Alu -1 148 1 5 143 475 318 124 26 chr13 73924534 73924728 -46359584 + B3 SINE B2 3 215 -1 5 1149 336 175 0 0 chr13 73924956 73925019 -46359293 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 5 1149 511 93 0 10 chr13 73928496 73928594 -46355718 - L1_Mus4 LINE L1 -4 6632 6536 5 1149 414 0 0 0 chr13 73928624 73928670 -46355642 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 5 1149 477 71 0 0 chr13 73928670 73928740 -46355572 - B1_Mur4 SINE Alu -2 148 79 5 1149 837 250 26 172 chr13 73928831 73929025 -46355287 - MTE2b LTR MaLR -85 294 106 5 1149 1233 77 50 0 chr13 73929025 73929207 -46355105 - B2_Mm1t SINE B2 0 193 3 5 1149 837 250 26 172 chr13 73929207 73929355 -46354957 - MTE2b LTR MaLR -274 105 2 5 1149 1072 251 130 9 chr13 73930532 73930862 -46353450 - ORR1D2 LTR MaLR 0 370 1 5 1149 336 304 80 9 chr13 73931757 73931870 -46352442 - B1F SINE Alu -9 140 20 5 1149 398 108 0 13 chr13 73932779 73932854 -46351458 + (TC)n Simple_repeat Simple_repeat 2 75 0 5 1149 212 186 40 54 chr13 73932855 73932929 -46351383 + (TCTCTG)n Simple_repeat Simple_repeat 2 74 0 5 1149 378 181 0 27 chr13 73933393 73933467 -46350845 + ID4_ SINE ID 1 72 -11 5 1149 2300 96 16 0 chr13 73933557 73933879 -46350433 - ORR1A2 LTR MaLR 0 327 1 5 1149 1142 54 0 13 chr13 73938890 73939039 -46345273 + B1_Mus1 SINE Alu 2 148 0 5 1149 1121 69 0 7 chr13 73940280 73940417 -46343895 + B1_Mus2 SINE Alu 2 138 -9 5 1149 351 60 0 0 chr13 73940417 73940467 -46343845 + (CAAT)n Simple_repeat Simple_repeat 2 51 0 5 1149 258 260 25 49 chr13 73940520 73940601 -46343711 - ID4_ SINE ID -3 80 2 5 1149 411 108 27 0 chr13 73942688 73942762 -46341550 - B2_Mm2 SINE B2 -2 193 118 5 1149 2556 79 109 16 chr13 73944156 73944542 -46339770 - Lx2A1 LINE L1 -2 7006 6585 5 1149 646 101 0 0 chr13 73944543 73944632 -46339680 + Lx2A1 LINE L1 6486 6574 -434 5 1149 180 270 100 75 chr13 73955931 73956011 -46328301 + L3 LINE CR1 786 867 -3622 5 1149 838 152 241 12 chr13 73956784 73956950 -46327362 - B3 SINE B2 -12 204 1 5 1149 285 135 0 0 chr13 73958415 73958467 -46325845 + (TGG)n Simple_repeat Simple_repeat 2 53 0 5 1149 239 0 0 31 chr13 73960821 73960853 -46323459 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 5 1149 284 281 73 0 chr13 73961279 73961361 -46322951 - ID_B1 SINE B4 -58 166 79 5 1149 337 221 8 126 chr13 73966085 73966204 -46318108 + MT2B LTR ERVL 153 257 -344 5 1149 656 178 8 25 chr13 73966108 73966229 -46318083 + B1_Mur2 SINE Alu 10 128 -21 5 1149 183 156 0 0 chr13 73966468 73966500 -46317812 + CT-rich Low_complexity Low_complexity 2 33 0 5 1149 279 254 30 0 chr13 73967229 73967296 -46317016 + ID4_ SINE ID 15 83 0 5 1149 752 11 22 0 chr13 73967964 73968056 -46316256 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 5 1149 189 107 0 0 chr13 73969638 73969666 -46314646 + (GAAA)n Simple_repeat Simple_repeat 3 30 0 6 1149 261 0 0 0 chr13 73971693 73971722 -46312590 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1149 423 362 0 0 chr13 73972509 73972650 -46311662 + (CA)n Simple_repeat Simple_repeat 2 142 0 6 1149 210 267 7 30 chr13 73972667 73972802 -46311510 + (CATA)n Simple_repeat Simple_repeat 4 135 0 6 1149 738 62 0 0 chr13 73978759 73978855 -46305457 + (TTCTC)n Simple_repeat Simple_repeat 2 97 0 6 1149 492 18 0 0 chr13 73978858 73978915 -46305397 + (TTCC)n Simple_repeat Simple_repeat 2 58 0 6 1149 802 20 0 0 chr13 73978916 73979016 -46305296 - B1_Mus1 SINE Alu -39 109 10 6 1149 826 161 12 43 chr13 73979026 73979043 -46305269 - B2_Mm2 SINE B2 -19 176 163 6 1149 360 0 0 0 chr13 73979043 73979083 -46305229 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 6 1149 826 161 12 43 chr13 73979083 73979227 -46305085 - B2_Mm2 SINE B2 -33 162 20 6 1149 428 262 9 25 chr13 73979564 73979711 -46304601 + B4 SINE B4 145 288 -4 6 1149 189 245 0 0 chr13 73979717 73979766 -46304546 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 6 1149 325 147 57 29 chr13 73986089 73986159 -46298153 - ID_B1 SINE B4 -16 208 137 6 1149 436 248 40 8 chr13 73986961 73987087 -46297225 - RMER15 LTR ERVL -18 557 428 6 1149 591 15 0 0 chr13 73988185 73988253 -46296059 + (TC)n Simple_repeat Simple_repeat 2 69 0 6 1149 378 0 0 0 chr13 73988253 73988294 -46296018 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1149 679 262 152 12 chr13 73989933 73990176 -46294136 - RMER15 LTR ERVL -14 561 285 6 1149 2010 104 2 185 chr13 73990418 73990721 -46293591 + ORR1A2 LTR MaLR 1 284 -43 6 1149 1190 68 7 0 chr13 73990721 73990867 -46293445 + B1_Mus1 SINE Alu 2 148 0 6 1149 2010 104 2 185 chr13 73990867 73990963 -46293349 + ORR1A2 LTR MaLR 285 327 0 6 1149 814 169 0 27 chr13 73992465 73992611 -46291701 - B1_Mur1 SINE Alu -7 142 1 6 1149 356 186 0 0 chr13 73992664 73992723 -46291589 + 5S rRNA rRNA 32 90 -31 6 1149 245 241 17 0 chr13 73993598 73993656 -46290656 + RLTR19C LTR ERVK 39 97 -409 6 1149 558 0 0 0 chr13 73994779 73994841 -46289471 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 1149 1270 47 0 0 chr13 73995668 73995816 -46288496 - B1_Mus1 SINE Alu 0 148 1 6 1149 21 0 0 0 chr13 73995828 73995849 -46288463 + AT_rich Low_complexity Low_complexity 1 21 0 6 1149 371 308 0 9 chr13 73995856 73995961 -46288351 - PB1D10 SINE Alu 0 117 14 6 1149 357 174 0 0 chr13 73996832 73996901 -46287411 + (TG)n Simple_repeat Simple_repeat 1 69 0 6 1149 3171 60 39 3 chr13 73999487 73999873 -46284439 - MTB LTR MaLR 0 400 1 6 1149 431 270 142 96 chr13 74000042 74000219 -46284093 + ORR1E LTR MaLR 4 188 -182 1 1149 746 207 0 48 chr13 74000251 74000398 -46283914 + B1_Mur1 SINE Alu 2 141 -8 2 1149 347 149 14 0 chr13 74000398 74000472 -46283840 + (CATA)n Simple_repeat Simple_repeat 3 77 0 3 1149 300 246 65 16 chr13 74000480 74000604 -46283708 - L1MEc LINE L1 -4972 1428 1299 4 1149 300 252 42 62 chr13 74000829 74000973 -46283339 - L1MEc LINE L1 -5046 1263 1123 4 1149 489 305 76 5 chr13 74001082 74001293 -46283019 - L1MEc LINE L1 -5529 871 646 4 1149 571 313 98 45 chr13 74001321 74001679 -46282633 + MLT1B LTR MaLR 8 384 -6 5 1149 491 276 122 33 chr13 74001804 74002108 -46282204 - L1MEc LINE L1 -6032 368 38 4 1149 336 241 43 75 chr13 74002961 74002978 -46281334 + PB1D7 SINE Alu 5 19 -101 6 1149 405 0 0 0 chr13 74002978 74003023 -46281289 + (TGGGGG)n Simple_repeat Simple_repeat 1 45 0 7 1149 616 183 70 0 chr13 74003023 74003138 -46281174 + B1_Mur2 SINE Alu 16 138 -11 8 1149 288 0 0 0 chr13 74003156 74003188 -46281124 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 1149 450 0 0 0 chr13 74003188 74003238 -46281074 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1149 245 160 0 20 chr13 74003300 74003351 -46280961 + Lx4A LINE L1 7009 7058 0 1 1149 602 318 106 3 chr13 74003577 74003889 -46280423 - MLT1C LTR MaLR -6 461 118 1 1149 248 318 11 11 chr13 74003966 74004141 -46280171 + CT-rich Low_complexity Low_complexity 1 175 0 1 1149 1174 157 14 50 chr13 74004962 74005183 -46279129 - ORR1C2 LTR MaLR 0 384 172 1 1149 329 172 26 26 chr13 74005186 74005341 -46278971 + (CAGA)n Simple_repeat Simple_repeat 2 156 0 1 1149 1597 184 48 48 chr13 74005355 74005686 -46278626 - ORR1D1 LTR MaLR -43 331 1 1 1149 1025 97 14 0 chr13 74005877 74006022 -46278290 + B1_Mus1 SINE Alu 2 148 0 1 1149 196 0 27 81 chr13 74006026 74006063 -46278249 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1149 180 0 0 0 chr13 74006643 74006663 -46277649 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1149 775 255 36 36 chr13 74007385 74007580 -46276732 + B3A SINE B2 4 198 0 2 1149 576 0 0 0 chr13 74007918 74007982 -46276330 + (CAAAA)n Simple_repeat Simple_repeat 4 67 0 2 1149 1753 159 83 70 chr13 74008222 74008595 -46275717 + ORR1C1 LTR MaLR 1 378 0 2 1149 461 284 62 57 chr13 74008699 74008908 -46275404 - MTEb LTR MaLR -164 215 6 2 1149 228 333 26 0 chr13 74009988 74010066 -46274246 + (CATA)n Simple_repeat Simple_repeat 1 80 0 2 1149 504 308 31 43 chr13 74011225 74011388 -46272924 - ID_B1 SINE B4 -5 219 59 2 1149 3521 61 100 4 chr13 74011620 74012112 -46272200 - Lx3_Mus LINE L1 -412 6597 6059 2 1149 3293 60 2 0 chr13 74012111 74012514 -46271798 + Lx3_Mus LINE L1 6585 6988 -21 2 1149 349 319 0 69 chr13 74012653 74012673 -46271639 - B4A SINE B4 -116 176 162 2 1149 351 0 0 0 chr13 74012673 74012712 -46271600 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1149 349 319 0 69 chr13 74012712 74012792 -46271520 - B4A SINE B4 -131 161 83 2 1149 2767 36 2 200 chr13 74013894 74014380 -46269932 - RLTR10 LTR ERVK 0 390 1 2 1149 9044 18 0 0 chr13 74014380 74015377 -46268935 - RLTR10-int LTR ERVK -1 1986 990 2 1149 374 246 54 31 chr13 74015459 74015589 -46268723 - RLTR10-int LTR ERVK -5987 1594 1462 3 1149 8194 42 3 34 chr13 74015653 74016697 -46267615 - RLTR10-int LTR ERVK -989 998 9 3 1149 2767 36 2 200 chr13 74016698 74017184 -46267128 - RLTR10 LTR ERVK 0 390 1 3 1149 1126 232 71 82 chr13 74020842 74021123 -46263189 + B4 SINE B4 15 292 0 3 1149 237 217 0 0 chr13 74021123 74021169 -46263143 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1149 459 178 35 78 chr13 74022914 74023043 -46261269 + PB1D9 SINE Alu 1 127 -22 3 1149 225 289 26 0 chr13 74023170 74023246 -46261066 + CT-rich Low_complexity Low_complexity 4 81 0 3 1149 1303 115 26 0 chr13 74025581 74025773 -46258539 + URR1B DNA MER1_type 29 225 0 3 1149 1344 61 61 0 chr13 74027694 74027874 -46256438 + B2_Mm1a SINE B2 1 191 -2 3 1149 3165 69 2 2 chr13 74028896 74029290 -46255022 + MTA_Mm LTR MaLR 1 394 -2 3 1149 508 278 16 48 chr13 74030313 74030502 -46253810 + L1M5 LINE L1 3861 4043 -2103 3 1149 351 0 0 0 chr13 74030841 74030880 -46253432 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1149 388 270 61 26 chr13 74031012 74031126 -46253186 + RSINE1 SINE B4 3 120 -45 4 1149 1977 175 57 13 chr13 74031126 74031509 -46252803 + Lx5 LINE L1 6651 7050 0 4 1149 352 350 133 11 chr13 74031810 74032073 -46252239 + L1M5 LINE L1 4891 5185 -961 3 1149 372 227 170 129 chr13 74032096 74032231 -46252081 + B4 SINE B4 41 181 -111 4 1149 492 184 10 10 chr13 74032231 74032330 -46251982 + ORR1D1 LTR MaLR 3 101 -273 4 1149 1178 247 84 36 chr13 74032330 74032533 -46251779 - RMER17C LTR ERVK 0 410 185 4 1149 297 0 0 0 chr13 74032533 74032566 -46251746 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1149 369 0 0 0 chr13 74032566 74032606 -46251706 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1149 1178 247 84 36 chr13 74032606 74032634 -46251678 - RMER17C LTR ERVK -226 184 159 4 1149 2472 89 0 24 chr13 74032634 74032967 -46251345 + ORR1A2 LTR MaLR 1 325 -2 4 1149 1178 247 84 36 chr13 74032967 74033013 -46251299 - RMER17C LTR ERVK -252 158 116 4 1149 657 63 0 0 chr13 74033013 74033108 -46251204 + (GA)n Simple_repeat Simple_repeat 2 96 0 4 1149 1178 247 84 36 chr13 74033108 74033218 -46251094 - RMER17C LTR ERVK -295 115 2 4 1149 1269 140 114 72 chr13 74033226 74033488 -46250824 + ORR1D1 LTR MaLR 97 369 -5 4 1149 296 267 0 0 chr13 74033513 74033573 -46250739 + B3 SINE B2 1 60 -156 4 1149 201 114 0 54 chr13 74033596 74033633 -46250679 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 5 1149 1812 198 34 57 chr13 74033658 74034130 -46250182 + L1_Mur3 LINE L1 3471 3931 -1949 5 1149 695 241 14 42 chr13 74034130 74034273 -46250039 + B1_Mur2 SINE Alu 1 139 -10 5 1149 304 301 79 29 chr13 74035106 74035246 -46249066 + L1MEg LINE L1 804 950 -5134 5 1149 351 0 0 0 chr13 74037465 74037504 -46246808 + (A)n Simple_repeat Simple_repeat 1 39 0 5 1149 4858 25 18 0 chr13 74037569 74038133 -46246179 - L1Md_F3 LINE L1 -2 6582 6009 5 1149 739 249 132 132 chr13 74038725 74038820 -46245492 + RMER5 LTR ERV1 126 192 -342 5 1149 1074 79 0 7 chr13 74038820 74038960 -46245352 - B1_Mm SINE Alu -8 139 1 5 1149 739 249 132 132 chr13 74038960 74039257 -46245055 + RMER5 LTR ERV1 193 518 -16 5 1149 342 239 129 62 chr13 74039468 74039646 -46244666 + MER34 LTR ERV1 1 190 -352 5 1149 1033 71 0 0 chr13 74039704 74039831 -46244481 + B1_Mus2 SINE Alu 3 129 -18 5 1149 208 138 31 0 chr13 74039837 74039902 -46244410 + (CAAA)n Simple_repeat Simple_repeat 1 67 0 6 1149 1375 170 4 13 chr13 74040262 74040489 -46243823 - URR1A DNA MER1_type -1 225 1 6 1149 623 218 48 21 chr13 74041263 74041394 -46242918 + B1F1 SINE Alu 1 138 -11 6 1149 342 0 0 0 chr13 74041394 74041432 -46242880 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 6 1149 623 218 48 21 chr13 74041432 74041445 -46242867 + B1F1 SINE Alu 139 149 0 6 1149 261 0 0 0 chr13 74041858 74041887 -46242425 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 6 1149 313 172 30 32 chr13 74041942 74042036 -46242276 - L1M4 LINE L1 -746 5400 5298 6 1149 432 0 0 0 chr13 74042403 74042451 -46241861 + (TA)n Simple_repeat Simple_repeat 1 48 0 6 1149 609 181 51 144 chr13 74042522 74042721 -46241591 - ORR1C2 LTR MaLR -192 186 20 6 1149 1041 41 0 149 chr13 74043134 74043308 -46241004 - B1_Mus1 SINE Alu 0 148 1 6 1149 1080 153 199 161 chr13 74043341 74043398 -46240914 - ORR1C2 LTR MaLR -4 380 326 6 1149 216 0 0 0 chr13 74043398 74043422 -46240890 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1149 1080 153 199 161 chr13 74043422 74043730 -46240582 - ORR1C2 LTR MaLR -59 325 2 6 1149 262 308 31 0 chr13 74043734 74043799 -46240513 + LTR40c LTR ERVL 336 402 -63 7 1149 276 303 114 0 chr13 74045071 74045203 -46239109 + RMER15 LTR ERVL 428 574 -1 7 1149 1488 201 86 14 chr13 74046588 74046984 -46237328 + L1VL4 LINE L1 831 1245 -5737 7 1149 430 61 15 15 chr13 74047057 74047124 -46237188 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 1149 646 330 86 48 chr13 74047169 74047586 -46236726 + Lx8 LINE L1 7036 7468 -5 7 1149 3643 209 90 72 chr13 74047741 74048778 -46235534 + RMER1B Other Other 3 1057 -9 7 1149 227 298 0 153 chr13 74048792 74048903 -46235409 + B3A SINE B2 25 118 -80 7 1149 234 281 118 43 chr13 74048822 74048915 -46235397 + B4A SINE B4 49 148 -144 7 1149 621 191 119 0 chr13 74049104 74049230 -46235082 + B1F2 SINE Alu 1 141 -8 7 1149 329 181 223 0 chr13 74049301 74049395 -46234917 - L1M5 LINE L1 -2386 3760 3646 8 1149 1495 215 99 23 chr13 74051512 74051864 -46232448 + MTE2a LTR MaLR 1 379 0 8 1149 2326 165 13 15 chr13 74052146 74052540 -46231772 - RLTR17 LTR ERVK 0 692 300 8 1149 407 168 290 0 chr13 74052738 74052845 -46231467 + B1_Mus2 SINE Alu 2 139 -8 8 1149 258 56 0 0 chr13 74052845 74052881 -46231431 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 8 1149 3132 53 8 8 chr13 74053192 74053588 -46230724 + MTA_Mm LTR MaLR 1 396 0 8 1149 515 314 132 5 chr13 74054270 74054459 -46229853 - B4A SINE B4 -78 214 2 8 1149 895 62 0 0 chr13 74054500 74054613 -46229699 + B1_Mus1 SINE Alu 36 148 0 8 1149 22 0 0 0 chr13 74055594 74055616 -46228696 + GC_rich Low_complexity Low_complexity 1 22 0 8 143 532 69 230 0 chr13 74055642 74055729 -46228583 - B1_Mus1 SINE Alu -41 107 1 8 1150 204 200 0 0 chr13 74056939 74056974 -46227338 + G-rich Low_complexity Low_complexity 1 35 0 9 1150 971 33 8 0 chr13 74058476 74058596 -46225716 + B1_Mus2 SINE Alu 27 147 0 9 1150 291 227 121 0 chr13 74059205 74059271 -46225041 - B1_Mur2 SINE Alu -9 140 67 9 1150 33 25 0 0 chr13 74059428 74059468 -46224844 + AT_rich Low_complexity Low_complexity 1 40 0 9 1150 999 103 13 40 chr13 74059468 74059620 -46224692 + B1_Mus1 SINE Alu 1 148 0 9 1150 238 163 22 55 chr13 74059620 74059711 -46224601 + A-rich Low_complexity Low_complexity 3 90 0 9 1150 23 33 0 0 chr13 74059737 74059767 -46224545 + AT_rich Low_complexity Low_complexity 1 30 0 9 1150 785 277 142 18 chr13 74060718 74061039 -46223273 - MTEa LTR MaLR -6 373 13 9 1150 992 192 34 24 chr13 74061333 74061541 -46222771 + B3 SINE B2 1 210 -6 9 1150 4029 151 94 53 chr13 74061742 74062029 -46222283 + RLTR25A LTR ERVK 31 315 -788 9 1150 1280 40 0 0 chr13 74062029 74062177 -46222135 + B1_Mus1 SINE Alu 1 148 0 1 1150 4029 151 94 53 chr13 74062177 74062721 -46221591 + RLTR25A LTR ERVK 316 896 -207 9 1150 715 140 107 40 chr13 74062987 74063136 -46221176 + RLTR25A LTR ERVK 945 1103 0 9 1150 10018 38 4 1 chr13 74063284 74064860 -46219452 - L1Md_F2 LINE L1 -330 6252 4672 1 1150 2684 43 0 9 chr13 74064860 74065189 -46219123 + L1Md_F2 LINE L1 6257 6582 0 1 1150 292 295 177 56 chr13 74065879 74066130 -46218182 + ORR1C1 LTR MaLR 30 313 -65 1 1150 496 222 16 57 chr13 74066130 74066254 -46218058 - PB1D9 SINE Alu -1 119 1 1 1150 292 295 177 56 chr13 74066254 74066268 -46218044 + ORR1C1 LTR MaLR 314 327 -51 1 1150 855 244 14 23 chr13 74066268 74066486 -46217826 - B3 SINE B2 0 216 1 1 1150 375 129 97 0 chr13 74066602 74066664 -46217648 - B1_Mur4 SINE Alu -82 68 1 1 1150 292 162 174 14 chr13 74066605 74066674 -46217638 - B4A SINE B4 -143 149 70 1 1150 395 159 89 22 chr13 74067875 74067965 -46216347 + ID_B1 SINE B4 124 219 -5 1 1150 210 173 192 0 chr13 74067990 74068042 -46216270 + ID4_ SINE ID 8 69 -14 1 1150 1472 287 197 57 chr13 74068118 74068517 -46215795 + Lx8 LINE L1 6473 6867 -606 1 1150 1163 49 28 0 chr13 74068517 74068660 -46215652 + B1_Mm SINE Alu 1 147 0 1 1150 1472 287 197 57 chr13 74068660 74069123 -46215189 + Lx8 LINE L1 6868 7456 -17 1 1150 328 269 115 47 chr13 74069264 74069412 -46214900 - L1MD LINE L1 -3122 3024 2867 1 1150 587 189 31 47 chr13 74069563 74069691 -46214621 - RLTR11A LTR ERVK 0 528 403 1 1150 376 302 100 89 chr13 74069778 74070129 -46214183 + ORR1E LTR MaLR 10 379 0 1 1150 4252 86 12 62 chr13 74070557 74070755 -46213557 + L1_Mus3 LINE L1 6021 6224 -414 1 1150 1142 82 0 13 chr13 74070755 74070904 -46213408 + B1_Mus1 SINE Alu 2 148 0 1 1150 4252 86 12 62 chr13 74070904 74071348 -46212964 + L1_Mus3 LINE L1 6225 6631 -7 1 1150 240 308 41 122 chr13 74071434 74071474 -46212838 - B4 SINE B4 -43 249 151 1 1150 499 250 24 16 chr13 74071474 74071600 -46212712 - B1_Mus1 SINE Alu -13 135 9 1 1150 240 308 41 122 chr13 74071600 74071630 -46212682 - B4 SINE B4 -43 150 70 1 1150 269 238 16 0 chr13 74071946 74072009 -46212303 - L1MD3 LINE L1 -676 7366 7303 1 1150 276 311 137 28 chr13 74072213 74072468 -46211844 - L1MD3 LINE L1 -942 7100 6783 1 1150 235 229 257 0 chr13 74073338 74073408 -46210904 + RMER21B LTR ERV1 480 567 -275 1 1150 1152 82 0 0 chr13 74073774 74073921 -46210391 + B1_Mus2 SINE Alu 1 147 0 1 1150 243 167 0 0 chr13 74073921 74073987 -46210325 + A-rich Low_complexity Low_complexity 1 66 0 1 1150 462 61 0 0 chr13 74074057 74074123 -46210189 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1150 180 179 0 0 chr13 74076024 74076063 -46208249 + GA-rich Low_complexity Low_complexity 2 40 0 1 1150 995 117 7 0 chr13 74076664 74076809 -46207503 - B1_Mus2 SINE Alu 0 147 2 1 1150 702 193 15 0 chr13 74076809 74076943 -46207369 - B1_Mus1 SINE Alu -11 137 1 1 1150 1031 236 0 5 chr13 74078367 74078559 -46205753 - B3 SINE B2 -25 191 1 1 1150 522 46 0 0 chr13 74084531 74084596 -46199716 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1150 916 276 12 72 chr13 74084630 74084880 -46199432 - B4 SINE B4 -47 245 11 1 1150 384 185 118 44 chr13 74085353 74085489 -46198823 - Lx4B LINE L1 -9 7049 6904 1 1150 2166 165 52 12 chr13 74086494 74086825 -46197487 + MTC LTR MaLR 1 349 -72 1 1150 207 0 0 0 chr13 74086825 74086848 -46197464 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1150 2166 165 52 12 chr13 74086848 74086921 -46197391 + MTC LTR MaLR 350 420 -1 1 1150 582 251 112 21 chr13 74088021 74088208 -46196104 - MLT1B LTR MaLR -144 246 43 1 1150 24 0 0 0 chr13 74088503 74088527 -46195785 + AT_rich Low_complexity Low_complexity 1 24 0 1 1150 215 122 20 0 chr13 74088763 74088812 -46195500 + (TTA)n Simple_repeat Simple_repeat 3 52 0 1 1150 3297 48 5 2 chr13 74089134 74089529 -46194783 - MTA_Mm LTR MaLR 0 396 1 1 1150 1472 58 26 31 chr13 74089873 74090067 -46194245 - B2_Mm2 SINE B2 -1 194 2 1 1150 292 304 13 0 chr13 74090252 74090331 -46193981 - ID4 SINE ID -2 81 2 1 1150 351 0 0 0 chr13 74090351 74090390 -46193922 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1150 664 301 257 9 chr13 74090391 74090609 -46193703 - B4 SINE B4 -13 279 8 1 1150 519 274 221 8 chr13 74093062 74093316 -46190996 + MER21B LTR ERV1 502 809 -54 1 1150 360 64 0 0 chr13 74093971 74094018 -46190294 + (T)n Simple_repeat Simple_repeat 1 47 0 1 1150 309 295 41 31 chr13 74094071 74094169 -46190143 - L1MEg LINE L1 -4069 2015 1917 1 1150 626 170 0 0 chr13 74094623 74094723 -46189589 - Lx9 LINE L1 -442 7202 7103 1 1150 1107 260 175 59 chr13 74095818 74096188 -46188124 - RMER15-int LTR ERVL -56 4943 4507 1 1150 1634 185 64 42 chr13 74096188 74096262 -46188050 - ORR1D1 LTR MaLR -1 373 312 1 1150 895 167 7 0 chr13 74096262 74096400 -46187912 + B1_Mur2 SINE Alu 3 141 -8 1 1150 1634 185 64 42 chr13 74096400 74096686 -46187626 - ORR1D1 LTR MaLR -63 311 5 1 1150 1107 260 175 59 chr13 74096686 74096756 -46187556 - RMER15-int LTR ERVL -493 4506 4452 1 1150 180 0 0 0 chr13 74096786 74096806 -46187506 + (TGG)n Simple_repeat Simple_repeat 1 20 0 1 1150 2437 234 37 27 chr13 74096820 74097418 -46186894 - RMER15-int LTR ERVL -3305 1694 1091 1 1150 233 290 103 48 chr13 74099205 74099350 -46184962 - L1MB5 LINE L1 -13 6161 6009 1 1150 329 0 24 0 chr13 74099793 74099834 -46184478 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1150 190 261 95 68 chr13 74102462 74102536 -46181776 - L3 LINE CR1 -898 3591 3516 1 1150 404 312 24 19 chr13 74104334 74104540 -46179772 - L1M5 LINE L1 -2623 3523 3317 1 1150 393 268 41 0 chr13 74104544 74104641 -46179671 - PB1D10 SINE Alu -5 112 12 1 1150 854 106 0 8 chr13 74104676 74104809 -46179503 + (TCCC)n Simple_repeat Simple_repeat 3 134 0 1 1150 344 295 11 0 chr13 74104817 74104912 -46179400 - PB1D10 SINE Alu -21 96 1 1 1150 337 283 43 17 chr13 74104913 74105028 -46179284 - L1MD LINE L1 -2929 3217 3100 1 1150 2351 155 42 15 chr13 74105116 74105522 -46178790 + MTD LTR MaLR 1 417 -2 1 1150 256 245 19 0 chr13 74107262 74107315 -46176997 - RSINE1 SINE B4 -4 161 108 1 1150 1208 153 77 20 chr13 74107334 74107580 -46176732 - Lx5 LINE L1 0 7050 6791 1 1150 24 0 0 0 chr13 74108485 74108509 -46175803 + GC_rich Low_complexity Low_complexity 1 24 0 1 1150 426 39 0 0 chr13 74111508 74111560 -46172752 + (TGG)n Simple_repeat Simple_repeat 3 54 0 1 1150 997 128 176 0 chr13 74112564 74112751 -46171561 - URR1B DNA MER1_type -1 224 5 1 1150 350 291 30 45 chr13 74112999 74113132 -46171180 - L1MD LINE L1 -2935 3211 3081 1 1150 195 42 0 0 chr13 74113386 74113410 -46170902 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1 1150 1074 93 0 0 chr13 74113410 74113549 -46170763 - B1_Mus1 SINE Alu -9 139 1 1 1150 1089 173 63 15 chr13 74113558 74113763 -46170549 - B3 SINE B2 0 216 2 1 1150 436 248 12 8 chr13 74113909 74114153 -46170159 + GA-rich Low_complexity Low_complexity 1 245 0 1 1150 225 132 0 0 chr13 74114160 74114198 -46170114 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 1 1150 297 305 127 79 chr13 74115098 74115474 -46168838 + MLT1D LTR MaLR 6 390 0 1 1150 202 216 0 0 chr13 74115810 74115847 -46168465 + GA-rich Low_complexity Low_complexity 4 40 0 1 1150 257 277 15 0 chr13 74117456 74117521 -46166791 + CT-rich Low_complexity Low_complexity 1 66 0 1 1150 183 260 82 0 chr13 74118331 74118404 -46165908 - L2 LINE L2 -910 2509 2431 1 1150 181 0 0 65 chr13 74119380 74119411 -46164901 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1150 291 212 22 71 chr13 74120338 74120521 -46163791 + (TATG)n Simple_repeat Simple_repeat 2 175 0 1 1150 251 213 71 30 chr13 74120528 74120697 -46163615 + (TG)n Simple_repeat Simple_repeat 2 177 0 1 1150 277 157 41 29 chr13 74120733 74120913 -46163399 + (TG)n Simple_repeat Simple_repeat 1 182 0 1 1150 236 300 0 0 chr13 74120933 74121003 -46163309 + Lx7 LINE L1 7252 7321 -375 1 1150 189 171 0 0 chr13 74121018 74121053 -46163259 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1150 519 287 127 49 chr13 74121190 74121702 -46162610 + L1M4 LINE L1 3562 4128 -2018 1 1150 370 325 191 34 chr13 74121822 74122179 -46162133 + L1M4 LINE L1 4797 5209 -937 1 1150 924 283 17 44 chr13 74123037 74123127 -46161185 - B4A SINE B4 0 292 209 1 1150 891 0 0 0 chr13 74123127 74123226 -46161086 + (TC)n Simple_repeat Simple_repeat 1 99 0 1 1150 924 283 17 44 chr13 74123226 74123431 -46160881 - B4A SINE B4 -84 208 5 1 1150 405 0 0 0 chr13 74124098 74124143 -46160169 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 1 1150 1150 52 0 0 chr13 74124143 74124279 -46160033 - B1_Mm SINE Alu -11 136 1 1 1150 245 192 94 19 chr13 74124777 74124830 -46159482 - ID_B1 SINE B4 -9 215 159 1 1150 249 246 16 16 chr13 74124789 74124851 -46159461 - B1F1 SINE Alu -28 121 60 1 1150 452 182 0 38 chr13 74124823 74124903 -46159409 + ID_B1 SINE B4 148 224 0 1 1150 918 230 89 0 chr13 74124935 74125126 -46159186 + B3 SINE B2 3 210 -6 1 1150 209 240 0 26 chr13 74126271 74126348 -46157964 + T-rich Low_complexity Low_complexity 2 76 0 1 1150 506 303 82 26 chr13 74129979 74130297 -46154015 + Tigger5 DNA MER2_type 2291 2405 -1 1 1150 409 144 98 49 chr13 74130298 74130400 -46153912 + L1ME2z LINE L1 6329 6435 -9 1 1150 378 173 38 60 chr13 74130630 74130814 -46153498 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1150 327 150 0 0 chr13 74130915 74130975 -46153337 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1150 2145 131 6 9 chr13 74131331 74131647 -46152665 - ORR1B1 LTR MaLR -79 315 1 1 1150 384 327 125 27 chr13 74131868 74132154 -46152158 + L1MD LINE L1 3413 3731 -2415 1 1150 282 243 16 116 chr13 74132924 74133045 -46151267 + L1M3 LINE L1 5428 5536 -647 1 1150 306 303 156 65 chr13 74133055 74133362 -46150950 - L1M4 LINE L1 -1453 4693 4359 1 1150 25 31 0 0 chr13 74133435 74133467 -46150845 + AT_rich Low_complexity Low_complexity 1 32 0 1 1150 219 288 69 52 chr13 74134060 74134226 -46150086 + MIRm SINE MIR 31 194 -68 1 1150 961 150 34 28 chr13 74134344 74134522 -46149790 - B2_Mm2 SINE B2 -16 179 1 1 1150 1092 180 25 83 chr13 74134544 74134786 -46149526 + MT2A LTR ERVL 1 228 -305 1 1150 304 200 188 0 chr13 74134801 74134886 -46149426 + MT2A LTR ERVL 433 533 0 1 1150 1446 143 38 4 chr13 74135490 74135728 -46148584 - Lx4A LINE L1 -3 7055 6810 1 1150 270 181 5 14 chr13 74136925 74136985 -46147327 + B3A SINE B2 1 58 -158 2 1150 501 280 130 29 chr13 74137041 74137387 -46146925 - L1M4c LINE L1 -3317 3065 2685 2 1150 330 222 186 23 chr13 74137555 74137684 -46146628 - L1M4c LINE L1 -4317 2067 1918 2 1150 375 267 8 40 chr13 74137786 74137911 -46146401 - L1M4c LINE L1 -4647 1737 1617 2 1150 1483 180 94 7 chr13 74137943 74138229 -46146083 - MTC LTR MaLR -110 311 1 2 1150 1297 119 5 16 chr13 74138931 74139119 -46145193 - B2_Mm2 SINE B2 -9 186 1 2 1150 384 22 0 0 chr13 74139302 74139347 -46144965 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1150 243 98 49 0 chr13 74140227 74140268 -46144044 - PB1D9 SINE Alu -48 72 30 2 1150 489 34 0 0 chr13 74141147 74141206 -46143106 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1150 296 304 175 34 chr13 74141510 74141922 -46142390 - L1MEc LINE L1 -5530 870 401 2 1150 300 234 167 16 chr13 74144149 74144275 -46140037 - L1MEd LINE L1 -5168 951 807 2 1150 1229 95 27 13 chr13 74144277 74144477 -46139835 - B2_Mm2 SINE B2 -1 215 1 2 1150 466 283 0 82 chr13 74145258 74145416 -46138896 + B3A SINE B2 54 198 0 2 1150 2648 72 27 0 chr13 74145527 74145862 -46138450 - ORR1A1 LTR MaLR -2 344 1 2 1150 420 37 0 0 chr13 74146208 74146262 -46138050 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1150 244 252 48 40 chr13 74149352 74149476 -46134836 - L1ME3B LINE L1 -270 5970 5846 2 1150 347 319 89 35 chr13 74149811 74149980 -46134332 - L1ME3B LINE L1 -811 5335 5158 2 1150 234 217 0 0 chr13 74150321 74150367 -46133945 - MLT1A1 LTR MaLR -146 262 217 2 1150 280 288 68 98 chr13 74153008 74153207 -46131105 - B4 SINE B4 -2 290 48 2 1150 22 0 0 0 chr13 74153255 74153277 -46131035 + AT_rich Low_complexity Low_complexity 1 22 0 2 1150 926 83 0 8 chr13 74155848 74155982 -46128330 + (TTC)n Simple_repeat Simple_repeat 2 134 0 2 1150 1191 68 0 0 chr13 74157855 74158002 -46126310 - B1_Mus2 SINE Alu 0 147 1 2 1150 234 0 0 0 chr13 74164705 74164731 -46119581 + (CAG)n Simple_repeat Simple_repeat 3 28 0 2 1150 293 256 226 25 chr13 74166711 74166957 -46117355 - L1M4 LINE L1 -984 5360 5066 2 1150 526 99 105 20 chr13 74167276 74167399 -46116913 - B1_Mur4 SINE Alu 0 148 6 2 1150 406 291 56 12 chr13 74172322 74172482 -46111830 + MER58A DNA MER1_type 42 208 -16 2 1150 724 164 63 21 chr13 74173938 74174081 -46110231 + B1_Mur1 SINE Alu 1 149 0 2 1150 1660 119 184 3 chr13 74179124 74179444 -46104868 + ORR1B1 LTR MaLR 17 394 0 2 1150 3903 180 64 35 chr13 74179444 74180283 -46104029 + Lx9 LINE L1 6779 7642 -2 2 1150 3568 45 2 24 chr13 74181180 74181635 -46102677 - L1_Mus2 LINE L1 0 6566 6122 2 1150 950 62 23 0 chr13 74183311 74183473 -46100839 + L1_Mus1 LINE L1 6427 6567 0 2 1150 258 205 0 67 chr13 74184729 74184907 -46099405 + (CATAG)n Simple_repeat Simple_repeat 1 166 0 2 1150 250 231 0 62 chr13 74184918 74185015 -46099297 + (CATAG)n Simple_repeat Simple_repeat 1 91 0 2 1150 2589 143 17 7 chr13 74185418 74185832 -46098480 + MTC LTR MaLR 4 421 0 2 1151 24 53 0 0 chr13 74189070 74189108 -46095204 + AT_rich Low_complexity Low_complexity 1 38 0 2 1151 430 287 53 24 chr13 74190879 74191086 -46093226 + L1M4 LINE L1 815 1027 -5515 2 1151 1458 239 47 40 chr13 74191089 74191512 -46092800 + Lx7 LINE L1 5749 6178 -1518 2 1151 2333 165 68 0 chr13 74191512 74191906 -46092406 + MTC LTR MaLR 1 421 0 2 1151 1458 239 47 40 chr13 74191906 74191927 -46092385 + Lx7 LINE L1 6179 6196 -1500 2 1151 459 0 0 0 chr13 74193296 74193347 -46090965 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1151 700 253 58 0 chr13 74194929 74195083 -46089229 - RSINE1 SINE B4 0 165 3 2 1151 351 113 0 0 chr13 74195378 74195431 -46088881 + (TGG)n Simple_repeat Simple_repeat 1 53 0 2 1151 340 328 29 44 chr13 74195464 74195601 -46088711 - B4A SINE B4 0 292 158 2 1151 502 285 61 6 chr13 74197127 74197307 -46087005 + MER31A LTR ERV1 1 190 -295 2 1151 398 266 58 76 chr13 74197335 74197506 -46086806 + MER31A LTR ERV1 274 441 -44 2 1151 305 294 58 19 chr13 74197528 74197632 -46086680 - PB1D10 SINE Alu -1 116 9 2 1151 239 167 0 0 chr13 74197638 74197680 -46086632 + B1_Mur1 SINE Alu 95 136 -13 2 1151 297 0 0 0 chr13 74197681 74197714 -46086598 + (CAAG)n Simple_repeat Simple_repeat 4 36 0 2 1151 726 240 9 103 chr13 74197731 74197891 -46086421 + MTEa LTR MaLR 178 337 -42 2 1151 1480 62 5 20 chr13 74197891 74198087 -46086225 - B2_Mm1a SINE B2 0 193 1 2 1151 726 240 9 103 chr13 74198087 74198149 -46086163 + MTEa LTR MaLR 338 379 0 2 1151 448 299 23 58 chr13 74198201 74198510 -46085802 + L1MD LINE L1 2654 2951 -3195 2 1151 277 333 0 0 chr13 74198645 74198717 -46085595 + tRNA-Ala-GCY_ tRNA tRNA 2 73 -2 2 1151 268 300 124 43 chr13 74198849 74199291 -46085021 + L1MD LINE L1 3117 3594 -2552 2 1151 243 0 0 0 chr13 74200138 74200165 -46084147 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1151 5510 59 10 0 chr13 74204617 74205313 -46078999 - L1Md_F2 LINE L1 -1268 4615 3913 2 1151 7673 58 11 0 chr13 74205312 74206265 -46078047 + L1Md_F2 LINE L1 4623 5586 -297 2 1151 7051 69 71 4 chr13 74206265 74207199 -46077113 + L1Md_F2 LINE L1 5587 6582 0 2 1151 307 282 31 21 chr13 74207541 74207713 -46076599 + MLT1D LTR MaLR 292 505 0 2 1151 612 0 0 0 chr13 74209045 74209113 -46075199 + (TTTTC)n Simple_repeat Simple_repeat 5 72 0 2 1151 378 59 0 0 chr13 74209113 74209159 -46075153 + (TC)n Simple_repeat Simple_repeat 1 46 0 2 1151 895 0 18 9 chr13 74210624 74210735 -46073577 + (TTTCC)n Simple_repeat Simple_repeat 1 112 0 2 1151 238 228 35 71 chr13 74210752 74210837 -46073475 - L1MD LINE L1 -2537 5458 5377 2 1151 269 328 130 43 chr13 74210916 74211263 -46073049 - L1MC LINE L1 -1812 4334 3958 2 1151 796 161 7 21 chr13 74211435 74211575 -46072737 + B1_Mm SINE Alu 9 146 -1 2 1151 359 255 90 72 chr13 74211575 74211976 -46072336 - L1MC LINE L1 -2935 3211 2804 2 1151 321 335 58 19 chr13 74212198 74212457 -46071855 + MLT1B LTR MaLR 60 328 -62 2 1151 270 0 0 0 chr13 74213155 74213185 -46071127 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1151 803 298 19 72 chr13 74213186 74213231 -46071081 - B4A SINE B4 -40 252 204 2 1151 585 0 0 0 chr13 74213231 74213296 -46071016 + (TC)n Simple_repeat Simple_repeat 2 66 0 2 1151 803 298 19 72 chr13 74213296 74213514 -46070798 - B4A SINE B4 -89 203 4 2 1151 373 203 0 26 chr13 74213526 74213602 -46070710 - B1_Mur1 SINE Alu -5 144 71 2 1151 336 282 68 129 chr13 74213768 74213960 -46070352 + RMER10A LTR ERVL 29 233 -209 2 1151 210 128 0 0 chr13 74213960 74213999 -46070313 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2 1151 336 282 68 129 chr13 74213999 74214217 -46070095 + RMER10A LTR ERVL 234 414 -28 2 1151 487 296 20 27 chr13 74214626 74214772 -46069540 + RSINE1 SINE B4 12 156 -9 2 1151 242 29 29 0 chr13 74214787 74214822 -46069490 + (CAAT)n Simple_repeat Simple_repeat 1 36 0 2 1151 1197 211 169 19 chr13 74215148 74215510 -46068802 - MTD LTR MaLR 0 419 4 2 1151 225 65 0 0 chr13 74215515 74215546 -46068766 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 2 1151 563 210 22 153 chr13 74216049 74216233 -46068079 - B3A SINE B2 0 195 36 2 1151 335 332 71 29 chr13 74217195 74217434 -46066878 + L1MEg LINE L1 1020 1268 -4816 2 1151 1699 26 0 0 chr13 74217946 74218136 -46066176 - B2_Mm1t SINE B2 -2 191 2 2 1151 392 285 99 84 chr13 74218170 74218312 -46066000 + RSINE1 SINE B4 2 145 -20 2 1151 733 271 0 13 chr13 74218406 74218563 -46065749 + B3A SINE B2 2 156 -42 2 1151 288 0 0 0 chr13 74218572 74218604 -46065708 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1151 484 305 51 22 chr13 74218915 74219093 -46065219 - Tigger7 DNA MER2_type -8 2483 2301 2 1151 278 130 0 0 chr13 74219094 74219140 -46065172 + RLTR16 LTR ERVK 1 46 -459 2 1151 351 336 46 40 chr13 74219300 74219452 -46064860 + MER44C DNA MER2_type 154 306 -427 2 1151 4406 34 13 4 chr13 74220129 74220658 -46063654 + L1Md_F3 LINE L1 6051 6584 0 2 1151 405 0 0 0 chr13 74221480 74221525 -46062787 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1151 252 59 0 0 chr13 74222106 74222140 -46062172 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1151 214 219 55 37 chr13 74222141 74222250 -46062062 + (TA)n Simple_repeat Simple_repeat 1 111 0 2 1151 282 220 88 37 chr13 74222261 74222420 -46061892 - RMER10A LTR ERVL -15 427 263 2 1151 231 114 0 0 chr13 74224824 74224859 -46059453 + (TTAGGG)n Simple_repeat Simple_repeat 3 37 0 2 1151 906 157 0 13 chr13 74227532 74227666 -46056646 + B1_Mus1 SINE Alu 2 135 -13 2 1151 287 25 0 24 chr13 74227666 74227707 -46056605 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 2 1151 906 157 0 13 chr13 74227707 74227721 -46056591 + B1_Mus1 SINE Alu 136 148 0 2 1151 1069 256 43 25 chr13 74228152 74228433 -46055879 + B4 SINE B4 5 290 -2 2 1151 1666 206 95 11 chr13 74228453 74228811 -46055501 - MTD LTR MaLR -31 388 1 2 1151 273 303 11 11 chr13 74228880 74228970 -46055342 + L1M5 LINE L1 4577 4666 -1480 2 1151 238 281 56 0 chr13 74230033 74230122 -46054190 - L1MA4 LINE L1 0 6300 6207 2 1151 1059 268 119 27 chr13 74230117 74230604 -46053708 - L1MA4 LINE L1 -273 6027 5496 2 1151 1686 264 66 29 chr13 74230598 74231238 -46053074 + L1M2 LINE L1 4319 4974 -1169 2 1151 300 53 0 0 chr13 74231238 74231276 -46053036 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 2 1151 1686 264 66 29 chr13 74231276 74231317 -46052995 + L1M2 LINE L1 4975 5024 -1119 2 1151 238 329 71 0 chr13 74231319 74231389 -46052923 + ID SINE ID 2 76 -148 2 1151 201 299 0 0 chr13 74231400 74231487 -46052825 + GA-rich Low_complexity Low_complexity 6 92 0 2 1151 864 146 0 0 chr13 74231478 74231656 -46052656 + (GAA)n Simple_repeat Simple_repeat 3 180 0 2 1151 297 0 0 0 chr13 74231654 74231687 -46052625 + (CAA)n Simple_repeat Simple_repeat 2 34 0 2 1151 522 236 78 22 chr13 74231750 74232023 -46052289 + L1M2 LINE L1 5120 5424 -876 2 1151 597 28 0 0 chr13 74232510 74232581 -46051731 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1151 396 238 0 0 chr13 74232581 74232665 -46051647 - B4A SINE B4 -26 266 183 2 1151 711 82 0 0 chr13 74232662 74232765 -46051547 - B2_Mm2 SINE B2 -63 130 28 2 1151 866 221 159 54 chr13 74235404 74235421 -46048891 - B4A SINE B4 0 292 277 2 1151 477 50 0 0 chr13 74235421 74235481 -46048831 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 1151 866 221 159 54 chr13 74235481 74235507 -46048805 - B4A SINE B4 -16 276 224 2 1151 705 12 0 0 chr13 74235507 74235589 -46048723 + (TC)n Simple_repeat Simple_repeat 1 82 0 2 1151 866 221 159 54 chr13 74235589 74235802 -46048510 - B4A SINE B4 -69 223 9 2 1151 682 264 0 0 chr13 74235814 74235954 -46048358 - B1F1 SINE Alu 0 149 10 2 1151 357 249 110 38 chr13 74237348 74237660 -46046652 - L1MA10 LINE L1 0 6334 5852 3 1151 195 69 0 0 chr13 74237885 74237914 -46046398 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1151 385 249 150 26 chr13 74237951 74238298 -46046014 - L1MEc LINE L1 -4025 2375 1967 3 1151 296 279 7 54 chr13 74238320 74238468 -46045844 - L1MEc LINE L1 -6209 191 51 3 1151 25 75 0 0 chr13 74238478 74238531 -46045781 + AT_rich Low_complexity Low_complexity 1 53 0 3 1151 265 227 0 70 chr13 74239636 74239707 -46044605 + Tigger15a DNA TcMar 92 157 -558 3 1151 833 286 13 40 chr13 74240970 74241269 -46043043 + B4 SINE B4 2 292 0 3 1151 482 216 31 10 chr13 74241373 74241471 -46042841 + PB1D10 SINE Alu 17 116 -1 3 1151 342 0 0 0 chr13 74243245 74243283 -46041029 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1151 1807 113 110 0 chr13 74246527 74246818 -46037494 - IAPEY2_LTR LTR ERVK 0 357 35 3 1151 6257 218 25 19 chr13 74247864 74249204 -46035108 - ORR1C2-int LTR MaLR -20 1350 2 3 1151 2157 161 41 0 chr13 74249205 74249572 -46034740 - ORR1C2 LTR MaLR 0 384 3 3 1151 427 287 123 0 chr13 74257467 74257589 -46026723 - ID_B1 SINE B4 0 224 88 3 1151 26 0 0 0 chr13 74257723 74257749 -46026563 + AT_rich Low_complexity Low_complexity 1 26 0 3 1151 3847 69 8 2 chr13 74257756 74258247 -46026065 + L1_Mus1 LINE L1 6074 6567 0 3 1151 351 0 0 0 chr13 74259497 74259536 -46024776 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 3 1151 267 93 0 0 chr13 74259938 74259981 -46024331 + (T)n Simple_repeat Simple_repeat 1 43 0 3 1151 219 246 0 0 chr13 74262673 74262730 -46021582 + GA-rich Low_complexity Low_complexity 6 62 0 3 1151 1208 41 14 0 chr13 74262982 74263127 -46021185 - B1_Mm SINE Alu 0 147 1 3 1151 423 0 0 0 chr13 74265381 74265428 -46018884 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 3 1151 315 0 0 0 chr13 74265843 74265878 -46018434 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1151 2200 38 0 15 chr13 74266407 74266675 -46017637 + L1_Mus1 LINE L1 6304 6567 0 3 1151 399 73 0 0 chr13 74266838 74266893 -46017419 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1151 736 254 0 0 chr13 74266893 74267024 -46017288 - RSINE1 SINE B4 -13 152 22 3 1151 236 100 0 24 chr13 74267058 74267099 -46017213 + (GAGTG)n Simple_repeat Simple_repeat 1 40 0 3 1151 321 226 81 0 chr13 74267107 74267169 -46017143 + RSINE1 SINE B4 75 141 -24 3 1151 216 0 0 0 chr13 74267170 74267194 -46017118 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1151 288 268 0 0 chr13 74267299 74267355 -46016957 - RSINE1 SINE B4 -107 58 3 3 1151 210 191 0 0 chr13 74267693 74267735 -46016577 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1151 497 320 33 7 chr13 74267772 74267923 -46016389 - RSINE1 SINE B4 -6 159 5 3 1151 1246 274 105 28 chr13 74267961 74268485 -46015827 + Lx7 LINE L1 6906 7471 -2 3 1151 1230 252 212 9 chr13 74269857 74270385 -46013927 - L1MC1 LINE L1 -254 6079 5445 3 1151 1416 275 72 22 chr13 74270466 74270924 -46013388 - Lx8 LINE L1 0 7473 6993 3 1151 548 188 112 6 chr13 74270973 74271134 -46013178 - L1MC1 LINE L1 -817 5329 5152 3 1151 495 238 2 17 chr13 74271134 74271253 -46013059 + PB1D10 SINE Alu 1 117 0 3 1151 926 218 137 27 chr13 74271403 74271738 -46012574 - MTEa LTR MaLR -7 372 1 3 1151 474 257 13 102 chr13 74271895 74271974 -46012338 - L1P5 LINE L1 -601 5555 5479 3 1151 3432 91 35 2 chr13 74271974 74272459 -46011853 - L1_Mus3 LINE L1 -3 6635 6135 3 1151 474 257 13 102 chr13 74272459 74272604 -46011708 - L1P5 LINE L1 -678 5478 5351 3 1151 357 297 89 50 chr13 74272612 74272695 -46011617 - L1MC LINE L1 -870 5276 5180 3 1151 294 288 0 14 chr13 74272695 74272769 -46011543 - ID2 SINE ID -7 76 4 3 1151 1264 273 148 48 chr13 74272769 74273645 -46010667 - L1MC LINE L1 -967 5179 4208 3 1151 402 21 0 0 chr13 74274553 74274600 -46009712 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1151 2449 162 99 36 chr13 74274600 74275094 -46009218 - RLTR11A LTR ERVK -3 525 1 3 1151 558 297 103 0 chr13 74275108 74275253 -46009059 - RSINE1 SINE B4 0 165 6 3 1151 212 224 41 0 chr13 74275890 74275939 -46008373 + CT-rich Low_complexity Low_complexity 3 53 0 3 1151 296 216 39 51 chr13 74275943 74276021 -46008291 - ID_B1 SINE B4 -81 143 67 3 1151 620 291 100 26 chr13 74278792 74279203 -46005109 - L1MEf LINE L1 -4902 1600 1166 3 1151 627 173 158 0 chr13 74279203 74279330 -46004982 - B1_Mus1 SINE Alu -1 147 1 3 1151 225 269 130 37 chr13 74279330 74279344 -46004968 - L1MEf LINE L1 -5244 1165 1150 3 1151 316 245 156 21 chr13 74279345 74279441 -46004871 + MER58A DNA MER1_type 2 110 -114 3 1151 521 306 135 64 chr13 74279582 74280288 -46004024 - L1MEf LINE L1 -5294 1102 347 3 1151 242 340 74 107 chr13 74282446 74282628 -46001684 - ORR1E LTR MaLR -5 354 183 3 1151 635 294 16 26 chr13 74282628 74282820 -46001492 + B3A SINE B2 1 190 -8 3 1151 242 340 74 107 chr13 74282820 74283003 -46001309 - ORR1E LTR MaLR -177 182 1 3 1151 781 179 223 0 chr13 74287689 74287873 -45996439 - URR1B DNA MER1_type 0 225 1 3 1151 2050 137 103 3 chr13 74288882 74289240 -45995072 - ORR1B1 LTR MaLR 0 394 1 3 1151 6092 132 52 22 chr13 74289240 74290555 -45993757 - ORR1B1-int LTR MaLR -191 1772 611 3 1151 368 247 13 0 chr13 74290536 74290613 -45993699 - MT2B LTR ERVL -523 78 1 3 1151 973 254 94 30 chr13 74293171 74293532 -45990780 - MLT1B LTR MaLR 0 390 7 3 1151 322 233 150 33 chr13 74297237 74297344 -45986968 - L1M2 LINE L1 -2944 3199 3077 3 1151 1173 61 0 20 chr13 74297344 74297494 -45986818 - B1_Mus1 SINE Alu 0 148 2 3 1151 322 233 150 33 chr13 74297494 74297506 -45986806 - L1M2 LINE L1 -3067 3076 3066 3 1151 742 94 0 0 chr13 74298926 74299022 -45985290 - B1_Mm SINE Alu -31 116 21 3 1151 323 91 0 35 chr13 74299821 74299878 -45984434 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3 1151 194 0 39 0 chr13 74300165 74300191 -45984121 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1151 784 233 5 77 chr13 74302222 74302417 -45981895 + B3A SINE B2 2 182 -16 3 1151 404 147 292 10 chr13 74303719 74303815 -45980497 - B1_Mus2 SINE Alu -7 140 18 3 1151 1586 167 136 16 chr13 74307928 74308092 -45976220 + ORR1C2 LTR MaLR 1 172 -212 3 1151 234 0 0 0 chr13 74308092 74308118 -45976194 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 3 1151 1586 167 136 16 chr13 74308118 74308263 -45976049 + ORR1C2 LTR MaLR 173 347 -37 3 1151 1181 62 0 0 chr13 74309872 74310018 -45974294 - B1_Mus1 SINE Alu 0 148 3 3 1151 454 216 0 43 chr13 74311700 74311792 -45972520 - PB1D7 SINE Alu 0 120 33 3 1151 648 0 0 0 chr13 74312334 74312406 -45971906 + (CCA)n Simple_repeat Simple_repeat 2 73 0 3 1151 2930 204 66 47 chr13 74313178 74313694 -45970618 - RMER1A Other Other -10 1020 479 3 1151 261 109 0 0 chr13 74313694 74313740 -45970572 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1151 2930 204 66 47 chr13 74313740 74313919 -45970393 - RMER1A Other Other -552 478 312 3 1151 3751 120 43 26 chr13 74313929 74314643 -45969669 + RMER6A LTR ERVK 1 755 -1 3 1151 2211 216 57 20 chr13 74314665 74315160 -45969152 - RMER1B Other Other -546 520 8 3 1151 1030 159 26 21 chr13 74315313 74315506 -45968806 - B2_Mm2 SINE B2 -1 194 1 3 1151 8984 108 64 7 chr13 74315596 74317439 -45966873 + Lx2 LINE L1 5049 6997 0 3 1151 1954 31 0 0 chr13 74317447 74317672 -45966640 + L1_Mus1 LINE L1 6343 6567 0 3 1152 230 224 42 56 chr13 74317932 74318003 -45966309 + LTR83 LTR ERVL 408 477 -303 3 1152 313 319 101 0 chr13 74318269 74318388 -45965924 - L1MC LINE L1 -2065 5817 5687 3 1152 808 232 93 23 chr13 74318743 74318959 -45965353 - B4A SINE B4 -7 285 55 3 1152 198 0 0 0 chr13 74318972 74318994 -45965318 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1152 642 242 19 32 chr13 74320135 74320289 -45964023 + RSINE1 SINE B4 1 152 -13 3 1152 4309 110 25 9 chr13 74320968 74321621 -45962691 + RMER17B LTR ERVK 2 664 -294 3 1152 243 254 0 0 chr13 74321622 74321685 -45962627 + RMER17B LTR ERVK 844 906 0 3 1152 3096 213 40 26 chr13 74322349 74323067 -45961245 + L1_Rod LINE L1 85 812 -6360 3 1152 666 58 0 0 chr13 74323067 74323154 -45961158 + (GA)n Simple_repeat Simple_repeat 2 88 0 3 1152 1080 199 70 220 chr13 74323155 74323207 -45961105 + L1_Rod LINE L1 3251 3291 -2556 3 1152 1250 41 0 0 chr13 74323207 74323353 -45960959 + B1_Mus2 SINE Alu 2 147 0 3 1152 1080 199 70 220 chr13 74323353 74323633 -45960679 + L1_Rod LINE L1 3292 3567 -2280 3 1152 4497 78 114 5 chr13 74323633 74324182 -45960130 + Lx3_Mus LINE L1 6312 6867 -142 3 1152 189 0 0 0 chr13 74324182 74324203 -45960109 + (GGGTG)n Simple_repeat Simple_repeat 3 23 0 3 1152 4497 78 114 5 chr13 74324203 74324282 -45960030 + Lx3_Mus LINE L1 6868 7008 -1 3 1152 1080 199 70 220 chr13 74324282 74324707 -45959605 + L1_Rod LINE L1 3568 3895 -1952 3 1152 248 159 0 83 chr13 74324715 74324763 -45959549 + Lx9 LINE L1 6741 6784 -860 3 1152 896 193 80 15 chr13 74324767 74324786 -45959526 + ORR1C2 LTR MaLR 172 194 -190 3 1152 606 14 0 0 chr13 74324786 74324857 -45959455 + (CCTG)n Simple_repeat Simple_repeat 1 71 0 3 1152 896 193 80 15 chr13 74324857 74325037 -45959275 + ORR1C2 LTR MaLR 195 383 -1 3 1152 3172 169 84 12 chr13 74325038 74325679 -45958633 + Lx9 LINE L1 6956 7642 -2 3 1152 2578 73 28 11 chr13 74326046 74326406 -45957906 + L1Md_F2 LINE L1 6217 6582 0 3 1152 183 273 164 52 chr13 74328601 74328717 -45955595 + MIR SINE MIR 39 167 -95 3 1152 845 250 57 24 chr13 74328880 74329089 -45955223 + B3A SINE B2 1 216 0 3 1152 288 312 94 0 chr13 74329497 74329593 -45954719 - PB1D7 SINE Alu -6 114 10 3 1152 211 418 28 22 chr13 74329658 74329839 -45954473 + MIR SINE MIR 63 244 -18 3 1152 262 295 124 0 chr13 74330785 74330890 -45953422 + L1M4c LINE L1 37 154 -6230 3 1152 244 293 23 58 chr13 74330974 74331061 -45953251 + L1M4c LINE L1 290 373 -6011 3 1152 298 240 87 29 chr13 74331080 74331183 -45953129 + L1M4c LINE L1 452 560 -5824 3 1152 318 50 0 0 chr13 74331186 74331226 -45953086 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1152 614 277 167 136 chr13 74331413 74331916 -45952396 + L1M4c LINE L1 1091 1610 -4774 3 1152 395 271 37 0 chr13 74331916 74332023 -45952289 - PB1D7 SINE Alu -9 111 1 3 1152 614 277 167 136 chr13 74332023 74332183 -45952129 + L1M4c LINE L1 1611 1775 -4609 3 1152 617 278 23 0 chr13 74332226 74332359 -45951953 + ID_B1 SINE B4 82 217 -7 3 1152 759 259 124 36 chr13 74332447 74332835 -45951477 + L1M4c LINE L1 1964 2385 -3999 3 1152 371 274 120 57 chr13 74332858 74332958 -45951354 + L1M4c LINE L1 2353 2458 -3924 3 1152 955 265 10 15 chr13 74332958 74333161 -45951151 + B3 SINE B2 2 203 -13 3 1152 416 277 120 57 chr13 74333161 74333535 -45950777 + L1M4c LINE L1 2459 2857 -3525 3 1152 1132 225 45 0 chr13 74333550 74333794 -45950518 + RMER15 LTR ERVL 165 419 -156 3 1152 3575 181 37 8 chr13 74333794 74334721 -45949591 + Lx2B LINE L1 986 1939 -3938 3 1152 1695 137 157 12 chr13 74334693 74335018 -45949294 + Lx2B LINE L1 5059 5430 -456 3 1152 924 116 0 20 chr13 74335018 74335167 -45949145 + Lx2B LINE L1 6083 6228 -772 3 1152 1829 157 72 7 chr13 74335175 74335482 -45948830 + Lx2B LINE L1 6674 7000 0 3 1152 822 232 195 67 chr13 74335486 74335558 -45948754 + L1M4c LINE L1 3261 3324 -3058 3 1152 972 267 10 5 chr13 74335558 74335765 -45948547 + B3 SINE B2 3 210 -6 3 1152 822 232 195 67 chr13 74335765 74336173 -45948139 + L1M4c LINE L1 3325 3803 -2579 3 1152 232 317 27 91 chr13 74337605 74337824 -45946488 + L1M2 LINE L1 2169 2373 -3770 3 1152 507 276 86 20 chr13 74337831 74338123 -45946189 + L1M2 LINE L1 2334 2644 -3499 3 1152 402 270 124 0 chr13 74338135 74338272 -45946040 + RMER30 DNA MER1_type 2 155 -47 3 1152 4167 269 80 37 chr13 74338302 74340271 -45944041 + L1M2 LINE L1 2648 4702 -1441 3 1152 2094 322 131 26 chr13 74340274 74340527 -45943785 + Lx8 LINE L1 5918 6198 -1275 4 1152 2148 136 121 11 chr13 74340527 74340906 -45943406 + MTC LTR MaLR 1 421 0 4 1152 2094 322 131 26 chr13 74340906 74341881 -45942431 + Lx8 LINE L1 6199 7274 -199 4 1152 309 295 93 88 chr13 74341819 74342001 -45942311 + RMER1C Other Other 1103 1285 -57 4 1152 1052 296 74 13 chr13 74342051 74342776 -45941536 + L1MA4 LINE L1 4605 5441 -918 4 1152 546 305 8 0 chr13 74342781 74342912 -45941400 + B1F1 SINE Alu 9 140 -9 4 1152 769 238 41 6 chr13 74343031 74343200 -45941112 + B3 SINE B2 1 175 -41 4 1152 985 208 167 49 chr13 74343206 74343535 -45940777 + L1MA4 LINE L1 5576 5943 -357 4 1152 207 0 0 0 chr13 74343546 74343569 -45940743 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1152 432 0 0 0 chr13 74343569 74343616 -45940696 + (GA)n Simple_repeat Simple_repeat 2 49 0 4 1152 1061 150 14 209 chr13 74343663 74343787 -45940525 - URR1B DNA MER1_type 0 225 141 4 1152 1006 168 0 0 chr13 74343787 74343930 -45940382 - B1_Mur4 SINE Alu -7 143 1 4 1152 1061 150 14 209 chr13 74343930 74344083 -45940229 - URR1B DNA MER1_type -85 140 2 4 1152 408 200 189 0 chr13 74344202 74344297 -45940015 + MTC LTR MaLR 1 113 -308 4 1152 251 182 179 13 chr13 74349281 74349359 -45934953 - PB1D10 SINE Alu 0 117 27 4 1152 1786 188 88 11 chr13 74353951 74354327 -45929985 - MTC LTR MaLR -8 413 9 4 1152 686 176 72 14 chr13 74354434 74354572 -45929740 - B1_Mur4 SINE Alu -4 146 1 4 1152 280 327 105 56 chr13 74355254 74355416 -45928896 + MER82 DNA MER2_type 445 614 -39 4 1152 213 39 0 0 chr13 74356433 74356459 -45927853 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 4 1152 507 17 0 0 chr13 74356487 74356547 -45927765 + (CTA)n Simple_repeat Simple_repeat 3 62 0 4 1152 305 250 0 0 chr13 74356590 74356650 -45927662 + RMER15 LTR ERVL 1 60 -515 4 1152 2344 198 87 25 chr13 74356727 74357244 -45927068 + RMER15 LTR ERVL 27 575 0 4 1152 1430 77 16 6 chr13 74357696 74357879 -45926433 + B2_Mm2 SINE B2 3 187 -8 4 1152 1166 180 40 0 chr13 74359388 74359588 -45924724 + B3 SINE B2 2 209 -7 4 1152 589 333 7 0 chr13 74359711 74359852 -45924460 - RSINE1 SINE B4 -22 143 2 4 1152 291 54 0 0 chr13 74359853 74359890 -45924422 + (TTTG)n Simple_repeat Simple_repeat 3 39 0 4 1152 811 227 134 11 chr13 74359893 74360080 -45924232 - ID_B1 SINE B4 -13 211 2 4 1152 240 35 0 0 chr13 74361143 74361172 -45923140 + (CTTTG)n Simple_repeat Simple_repeat 1 29 0 4 1152 1122 269 91 3 chr13 74361395 74361693 -45922619 + MTEa LTR MaLR 2 325 -54 4 1152 411 21 0 0 chr13 74361693 74361741 -45922571 + (TTCC)n Simple_repeat Simple_repeat 3 50 0 4 1152 302 206 0 0 chr13 74361741 74361804 -45922508 + MTEa LTR MaLR 315 377 -2 4 1152 609 133 0 0 chr13 74363529 74363627 -45920685 + (GA)n Simple_repeat Simple_repeat 1 98 0 4 1152 319 252 35 88 chr13 74363627 74363740 -45920572 - PB1D7 SINE Alu -12 108 2 4 1152 315 0 0 0 chr13 74364486 74364521 -45919791 + (CAT)n Simple_repeat Simple_repeat 3 37 0 4 1152 3179 74 19 19 chr13 74364615 74365042 -45919270 - Lx5 LINE L1 -8 7001 6575 4 1152 4426 101 54 13 chr13 74365042 74365080 -45919232 + Lx3_Mus LINE L1 5887 5921 -1088 4 1152 207 0 0 0 chr13 74365080 74365103 -45919209 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1152 4426 101 54 13 chr13 74365103 74365768 -45918544 + Lx3_Mus LINE L1 5922 6619 -390 4 1152 1260 101 55 17 chr13 74365768 74365949 -45918363 - B2_Mm2 SINE B2 -7 188 1 4 1152 2341 97 21 0 chr13 74367553 74367884 -45916428 + L1_Mm LINE L1 4582 4919 -964 4 1152 6798 3 0 1 chr13 74368536 74369282 -45915030 + L1Md_A LINE L1 4842 5586 -297 4 1152 9639 2 0 0 chr13 74369282 74370278 -45914034 + L1Md_A LINE L1 5587 6582 0 4 1152 299 279 36 7 chr13 74370348 74370485 -45913827 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 4 1152 4734 134 40 10 chr13 74371104 74372347 -45911965 - Lx5 LINE L1 -679 6371 5085 4 1152 3233 189 89 13 chr13 74372346 74372959 -45911353 + Lx5 LINE L1 6372 7035 -15 4 1152 453 36 0 0 chr13 74372959 74373014 -45911298 + (TGAA)n Simple_repeat Simple_repeat 3 57 0 4 1152 3233 189 89 13 chr13 74373014 74373027 -45911285 + Lx5 LINE L1 7036 7046 -4 4 1152 252 224 118 0 chr13 74373306 74373382 -45910930 + L1M5 LINE L1 5563 5647 -517 4 1152 432 0 0 0 chr13 74373549 74373597 -45910715 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 4 1152 1153 45 15 0 chr13 74373597 74373731 -45910581 - B1_Mus1 SINE Alu -12 136 1 4 1152 950 215 116 34 chr13 74373738 74373769 -45910543 + L1M2 LINE L1 5083 5114 -1029 4 1152 414 0 0 0 chr13 74373769 74373815 -45910497 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 4 1152 950 203 60 28 chr13 74373815 74374128 -45910184 + L1M2 LINE L1 5115 5457 -855 4 1152 251 255 63 153 chr13 74374128 74374239 -45910073 + MT2B LTR ERVL 144 244 -357 4 1152 522 243 54 75 chr13 74374161 74374308 -45910004 + B1_Mur2 SINE Alu 6 149 0 4 1152 248 254 18 0 chr13 74374319 74374374 -45909938 + RSINE1 SINE B4 6 61 -104 4 1152 22 0 0 0 chr13 74374459 74374481 -45909831 + AT_rich Low_complexity Low_complexity 1 22 0 4 1152 544 362 9 67 chr13 74374734 74374944 -45909368 - B4A SINE B4 -94 198 1 4 1152 1386 249 80 58 chr13 74375018 74375618 -45908694 + RMER20A LTR ERVK 5 587 -40 4 1152 11892 142 22 35 chr13 74375880 74378454 -45905858 + L1_Mur2 LINE L1 814 3361 -2516 4 1152 29 47 0 0 chr13 74378461 74378504 -45905808 + AT_rich Low_complexity Low_complexity 1 43 0 4 1152 1075 248 139 21 chr13 74378512 74378986 -45905326 - RCHARR1 DNA MER1_type -432 542 13 4 1152 459 329 41 7 chr13 74379021 74379168 -45905144 - RSINE1 SINE B4 -12 153 2 4 1152 255 61 0 0 chr13 74379211 74379244 -45905068 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1152 417 280 83 72 chr13 74379343 74379445 -45904867 - L1MA8 LINE L1 -1 6182 6093 4 1152 597 0 0 0 chr13 74379445 74379514 -45904798 - L1_Mus1 LINE L1 0 6567 6499 4 1152 1904 241 148 19 chr13 74379514 74380357 -45903955 - L1MA8 LINE L1 -91 6092 5300 4 1152 625 129 181 0 chr13 74380363 74380479 -45903833 - B1_Mus2 SINE Alu -2 145 9 4 1152 5160 55 2 7 chr13 74380489 74381143 -45903169 - L1_Mus1 LINE L1 0 6567 5962 4 1152 533 256 39 21 chr13 74381165 74381371 -45902941 - L1MA8 LINE L1 -841 5302 5069 4 1152 315 233 23 0 chr13 74381353 74381439 -45902873 - L1M3 LINE L1 -396 5775 5688 4 1152 228 35 0 0 chr13 74383008 74383037 -45901275 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1152 626 95 0 10 chr13 74385807 74385903 -45898409 + (GAA)n Simple_repeat Simple_repeat 2 96 0 4 1152 369 0 0 0 chr13 74385901 74385942 -45898370 + (CAA)n Simple_repeat Simple_repeat 2 42 0 4 1152 558 317 65 65 chr13 74387109 74387399 -45896913 + RMER15-int LTR ERVL 1780 2069 -2930 4 1152 462 260 91 8 chr13 74387406 74387538 -45896774 - B1F SINE Alu -1 148 6 4 1152 276 316 66 90 chr13 74387538 74387566 -45896746 - B4A SINE B4 -60 204 70 4 1152 207 0 0 0 chr13 74387595 74387618 -45896694 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 4 1152 501 17 0 0 chr13 74387711 74387769 -45896543 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 1152 459 0 0 0 chr13 74387770 74387821 -45896491 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 4 1152 4095 198 65 45 chr13 74388040 74388491 -45895821 + Lx9 LINE L1 2773 3233 -2614 4 1152 1240 31 12 6 chr13 74388491 74388652 -45895660 + (GAAA)n Simple_repeat Simple_repeat 3 164 0 4 1152 4016 197 65 45 chr13 74388652 74389329 -45894983 + Lx9 LINE L1 3234 3923 -1924 4 1152 3746 216 68 43 chr13 74389301 74390526 -45893786 + Lx9 LINE L1 4862 6246 -1398 4 1152 522 0 0 0 chr13 74390557 74390615 -45893697 + (TAGA)n Simple_repeat Simple_repeat 2 59 0 4 1152 2407 162 50 28 chr13 74390690 74391147 -45893165 + Lx9 LINE L1 6918 7384 -260 4 1152 334 291 144 72 chr13 74391208 74391547 -45892765 + L1MD LINE L1 4235 4625 -1521 4 1152 719 236 42 61 chr13 74391547 74391759 -45892553 - B3 SINE B2 -6 210 3 4 1152 334 289 144 72 chr13 74391759 74391841 -45892471 + L1MD LINE L1 4621 4687 -1459 4 1152 668 226 10 79 chr13 74391841 74392043 -45892269 - B2_Mm2 SINE B2 -6 189 2 4 1152 509 290 22 0 chr13 74392208 74392346 -45891966 + RSINE1 SINE B4 3 143 -22 4 1152 273 75 0 0 chr13 74392346 74392386 -45891926 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1152 762 249 129 16 chr13 74392412 74392810 -45891502 + L1MD LINE L1 5009 5455 -989 4 1152 622 251 194 6 chr13 74393604 74393784 -45890528 - B3 SINE B2 0 216 3 4 1152 504 0 0 0 chr13 74394819 74394875 -45889437 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1152 664 152 0 36 chr13 74396569 74396586 -45887726 - URR1A DNA MER1_type -18 208 193 4 1152 216 0 0 0 chr13 74396586 74396610 -45887702 + (CCCTAA)n Simple_repeat Simple_repeat 5 28 0 4 1152 664 152 0 36 chr13 74396610 74396729 -45887583 - URR1A DNA MER1_type -34 192 77 4 1152 257 231 228 17 chr13 74399886 74400041 -45884271 + MLT2B1 LTR ERVL 364 560 0 4 1152 2194 99 38 9 chr13 74400065 74400382 -45883930 - ORR1A3 LTR MaLR 0 326 1 4 1152 21 0 0 0 chr13 74401247 74401268 -45883044 + AT_rich Low_complexity Low_complexity 1 21 0 4 1152 2530 188 111 49 chr13 74401568 74402143 -45882169 - RMER19C LTR ERVK 0 611 1 4 1152 2923 47 0 0 chr13 74402711 74403053 -45881259 - ORR1A1 LTR MaLR -4 342 1 4 1152 1853 156 12 29 chr13 74403503 74403847 -45880465 - ORR1A1 LTR MaLR -8 338 1 4 1152 393 271 23 8 chr13 74404224 74404354 -45879958 + L1MA4 LINE L1 4941 5072 -1071 4 1152 295 271 29 0 chr13 74404372 74404442 -45879870 + RSINE1 SINE B4 14 85 -80 4 1152 477 90 0 0 chr13 74404461 74404528 -45879784 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 1152 22 0 0 0 chr13 74404560 74404582 -45879730 + AT_rich Low_complexity Low_complexity 1 22 0 4 1152 1060 291 81 2 chr13 74404582 74405026 -45879286 + L1MA4 LINE L1 5591 6069 -231 4 1152 755 264 15 18 chr13 74405034 74405217 -45879095 + B3 SINE B2 23 210 -6 4 1152 507 285 179 49 chr13 74406290 74406743 -45877569 - L1MC4 LINE L1 -785 7257 6746 4 1152 665 225 80 0 chr13 74406758 74406896 -45877416 - B3A SINE B2 -49 149 1 4 1152 306 297 105 4 chr13 74406906 74407153 -45877159 - L1M5 LINE L1 -2667 3479 3208 4 1152 313 305 152 34 chr13 74407241 74407536 -45876776 - L1M5 LINE L1 -3216 2930 2601 4 1152 262 332 102 43 chr13 74407584 74407919 -45876393 - L1M5 LINE L1 -3613 2533 2175 4 1152 2449 128 25 20 chr13 74407919 74408324 -45875988 - MTB_Mm LTR MaLR 0 407 1 4 1152 262 332 102 43 chr13 74408324 74408382 -45875930 - L1M5 LINE L1 -3972 2174 2117 4 1152 772 250 0 0 chr13 74408508 74408656 -45875656 + B1_Mus1 SINE Alu 1 148 0 4 1152 1439 67 0 30 chr13 74408761 74408960 -45875352 - B2_Mm2 SINE B2 0 195 3 4 1152 420 305 141 21 chr13 74409349 74409550 -45874762 - MLT-int LTR MaLR -74 1661 1428 4 1152 1097 73 0 0 chr13 74409550 74409686 -45874626 + B1_Mus1 SINE Alu 2 137 -11 4 1152 261 0 0 0 chr13 74409686 74409715 -45874597 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 1152 654 13 0 0 chr13 74409715 74409789 -45874523 + (GGAAA)n Simple_repeat Simple_repeat 5 79 0 4 1152 420 305 141 21 chr13 74409789 74409876 -45874436 - MLT-int LTR MaLR -308 1427 1338 4 1152 1329 298 140 11 chr13 74410017 74410658 -45873654 - MLT1A-int LTR MaLR -639 732 9 5 1152 534 298 182 39 chr13 74410672 74410979 -45873333 - MLT1A LTR MaLR -23 351 1 5 1152 944 278 59 121 chr13 74412709 74413131 -45871181 + MTD LTR MaLR 9 404 -15 5 1152 936 286 129 16 chr13 74416571 74417162 -45867150 - L1MB5 LINE L1 -301 5873 5213 5 1152 390 264 184 40 chr13 74417756 74418206 -45866106 + L1MC LINE L1 4493 5046 -1100 5 1152 369 0 0 0 chr13 74418241 74418282 -45866030 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1152 738 233 14 0 chr13 74418997 74419143 -45865169 + B1_Mur1 SINE Alu 1 148 -1 5 1152 210 231 0 0 chr13 74419756 74419795 -45864517 + C-rich Low_complexity Low_complexity 1 39 0 5 1152 369 0 0 0 chr13 74419795 74419836 -45864476 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1152 1746 261 217 24 chr13 74421611 74422187 -45862125 + L1M4 LINE L1 2649 3355 -2791 5 1152 456 299 131 47 chr13 74422187 74422531 -45861781 + MLT1A LTR MaLR 2 374 0 5 1152 1746 261 217 24 chr13 74422531 74423289 -45861023 + L1M4 LINE L1 3356 4241 -1905 5 1152 755 210 14 0 chr13 74423330 74423468 -45860844 + B1_Mur1 SINE Alu 3 142 -7 5 1152 347 303 34 76 chr13 74423705 74423969 -45860343 + L1MEc LINE L1 1341 1593 -4807 5 1152 834 259 0 11 chr13 74424047 74424227 -45860085 + B3A SINE B2 5 182 -16 5 1152 807 175 0 0 chr13 74424229 74424460 -45859852 + (CA)n Simple_repeat Simple_repeat 1 231 0 5 1152 503 279 46 6 chr13 74424597 74424770 -45859542 + LTR41B LTR ERVL 2 181 -577 5 1152 404 37 0 18 chr13 74425062 74425117 -45859195 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1152 568 237 34 0 chr13 74425313 74425431 -45858881 + B3A SINE B2 1 122 -76 5 1152 497 215 0 0 chr13 74425457 74425550 -45858762 + PB1D10 SINE Alu 7 99 -18 5 1152 261 0 0 0 chr13 74425556 74425585 -45858727 + (TAAA)n Simple_repeat Simple_repeat 1 29 0 5 1152 775 228 38 148 chr13 74425626 74425854 -45858458 + L1M4 LINE L1 4831 5043 -1103 5 1152 1421 51 11 0 chr13 74425854 74426030 -45858282 - B2_Mm1t SINE B2 -14 179 2 5 1152 775 228 38 148 chr13 74426030 74426219 -45858093 + L1M4 LINE L1 5044 5202 -944 5 1152 485 214 0 0 chr13 74426226 74426315 -45857997 + B3 SINE B2 8 96 -120 5 1152 4427 20 2 0 chr13 74426446 74426938 -45857374 + MT2_Mm LTR ERVL 1 493 0 5 1152 524 157 284 9 chr13 74430961 74431077 -45853235 - B1_Mur4 SINE Alu -2 148 1 5 1152 22 80 0 0 chr13 74431088 74431138 -45853174 + AT_rich Low_complexity Low_complexity 1 50 0 5 1152 1640 191 39 30 chr13 74432234 74432596 -45851716 + ORR1D1 LTR MaLR 1 365 -9 5 1152 495 0 0 0 chr13 74433095 74433150 -45851162 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 1152 291 348 35 9 chr13 74434804 74434917 -45849395 + MTE-int LTR MaLR 883 998 -582 5 1152 7269 148 15 16 chr13 74434917 74436139 -45848173 + Lx4B LINE L1 5820 7040 -18 5 1152 318 106 0 0 chr13 74436139 74436186 -45848126 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 5 1152 2057 93 26 6 chr13 74436200 74436513 -45847799 + ORR1A2 LTR MaLR 1 319 -8 5 1152 545 251 210 5 chr13 74436526 74436726 -45847586 + MTE-int LTR MaLR 1002 1242 -338 5 1152 848 271 40 70 chr13 74437245 74437418 -45846894 - B4A SINE B4 0 292 117 5 1152 4080 53 0 8 chr13 74437418 74437927 -45846385 + L1Md_F2 LINE L1 6078 6582 0 5 1152 848 271 40 70 chr13 74437927 74438054 -45846258 - B4A SINE B4 -176 116 1 5 1152 1138 98 75 0 chr13 74439508 74439681 -45844631 - B2_Mm2 SINE B2 -8 187 2 5 1152 527 245 27 40 chr13 74442008 74442157 -45842155 - B1_Mur2 SINE Alu 0 149 3 5 1152 292 200 222 12 chr13 74442372 74442453 -45841859 + ID_B1 SINE B4 76 173 -51 5 1152 329 141 254 0 chr13 74442383 74442454 -45841858 + PB1D10 SINE Alu 5 93 -24 5 1152 350 263 202 0 chr13 74442482 74442596 -45841716 + B1F1 SINE Alu 13 149 0 5 1152 1111 229 205 19 chr13 74448192 74448504 -45835808 + ORR1D2 LTR MaLR 1 370 0 5 1153 306 232 186 69 chr13 74449729 74449831 -45834481 + ID_B1 SINE B4 85 198 -26 5 1153 987 246 96 51 chr13 74449963 74450297 -45834015 + MTEa LTR MaLR 19 367 -12 5 1153 250 327 8 66 chr13 74450741 74450824 -45833488 + MLT1A1 LTR MaLR 48 129 -279 5 1153 348 24 0 0 chr13 74450824 74450865 -45833447 + (GA)n Simple_repeat Simple_repeat 1 41 0 5 1153 250 327 8 66 chr13 74450865 74450902 -45833410 + MLT1A1 LTR MaLR 130 161 -247 5 1153 1546 60 11 0 chr13 74451139 74451324 -45832988 + B2_Mm1t SINE B2 1 187 -6 5 1153 508 206 229 16 chr13 74452191 74452374 -45831938 + ID_B1 SINE B4 2 223 -1 5 1153 1079 236 0 18 chr13 74452426 74452646 -45831666 + B3 SINE B2 1 216 0 5 1153 25 31 0 0 chr13 74452646 74452678 -45831634 + AT_rich Low_complexity Low_complexity 1 32 0 5 1153 227 103 0 25 chr13 74452880 74452920 -45831392 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 5 1153 21 57 0 0 chr13 74452938 74452973 -45831339 + AT_rich Low_complexity Low_complexity 1 35 0 5 1153 863 161 0 0 chr13 74452995 74453125 -45831187 - B3 SINE B2 -86 130 1 5 1153 1265 48 0 7 chr13 74453193 74453340 -45830972 - B1_Mm SINE Alu 0 147 2 5 1153 227 31 31 0 chr13 74453845 74453877 -45830435 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1153 209 286 0 38 chr13 74454404 74454484 -45829828 + GA-rich Low_complexity Low_complexity 2 78 0 5 1153 265 308 201 28 chr13 74455613 74455827 -45828485 - L3 LINE CR1 -928 3561 3311 5 1153 307 270 135 0 chr13 74456874 74457000 -45827312 + MER3 DNA MER1_type 66 208 -1 5 1153 266 311 0 102 chr13 74457553 74457605 -45826707 - PB1D10 SINE Alu 0 117 67 5 1153 409 294 84 58 chr13 74457605 74457796 -45826516 - B3A SINE B2 0 198 3 5 1153 266 311 0 102 chr13 74457796 74457861 -45826451 - PB1D10 SINE Alu -51 66 12 5 1153 672 258 75 55 chr13 74457973 74458318 -45825994 - RLTR15 LTR ERVK -7 352 1 5 1153 391 183 42 0 chr13 74458324 74458395 -45825917 - PB1D10 SINE Alu -43 74 1 5 1153 233 260 64 64 chr13 74458327 74458405 -45825907 - MT2B2 LTR ERVL -355 229 152 5 1153 610 272 119 6 chr13 74458475 74458672 -45825640 - L1MC LINE L1 -522 5662 5444 5 1153 418 281 8 26 chr13 74458678 74458795 -45825517 - PB1D10 SINE Alu -2 115 1 5 1153 2128 140 18 24 chr13 74458795 74459125 -45825187 + ORR1A4 LTR MaLR 2 329 0 5 1153 267 189 0 0 chr13 74459147 74459200 -45825112 + CT-rich Low_complexity Low_complexity 3 55 0 5 1153 340 274 133 6 chr13 74459312 74459492 -45824820 - L1ME2 LINE L1 -193 5971 5769 5 1153 1203 188 83 119 chr13 74459658 74460045 -45824267 - MTE2a LTR MaLR -6 373 1 5 1153 236 207 52 0 chr13 74460787 74460845 -45823467 - PB1D7 SINE Alu -21 99 39 5 1153 252 305 74 61 chr13 74460805 74461003 -45823309 + MTE2a LTR MaLR 183 377 -2 5 1153 225 202 126 102 chr13 74461657 74461784 -45822528 + YREP_Mm Unknown Unknown 162 291 -1521 5 1153 639 195 86 0 chr13 74461673 74461801 -45822511 - B1_Mus1 SINE Alu 0 148 10 5 1153 8075 65 20 0 chr13 74462541 74464166 -45820146 + L1_Mus1 LINE L1 4903 6654 0 5 1153 282 360 50 67 chr13 74466550 74466669 -45817643 - B1F1 SINE Alu 0 117 1 5 1153 238 154 204 21 chr13 74466920 74467013 -45817299 - L1ME1 LINE L1 -182 5997 5888 5 1153 198 0 0 0 chr13 74467873 74467895 -45816417 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 5 1153 925 125 29 14 chr13 74467899 74468037 -45816275 - B1_Mus1 SINE Alu -7 141 2 5 1153 468 270 10 0 chr13 74468085 74468185 -45816127 + B1_Mur1 SINE Alu 39 139 -10 5 1153 3139 81 5 0 chr13 74468185 74468582 -45815730 + Lx3_Mus LINE L1 6611 7009 0 5 1153 2171 141 107 3 chr13 74472151 74472506 -45811806 - ORR1B1 LTR MaLR -2 392 1 5 1153 318 232 157 25 chr13 74472569 74472728 -45811584 - L1MA9 LINE L1 -38 6274 6095 5 1153 392 312 85 34 chr13 74472761 74472937 -45811375 + ORR1E LTR MaLR 1 185 -174 5 1153 436 346 32 26 chr13 74473288 74473478 -45810834 - B4 SINE B4 -97 195 5 5 1153 559 265 118 45 chr13 74473584 74473762 -45810550 - B3A SINE B2 -5 193 3 5 1153 328 298 59 42 chr13 74473812 74473931 -45810381 - RSINE1 SINE B4 -22 143 23 5 1153 369 210 139 11 chr13 74473932 74474033 -45810279 + ORR1D1 LTR MaLR 1 111 -248 5 1153 375 202 160 0 chr13 74474029 74474123 -45810189 + ORR1D1 LTR MaLR 266 374 0 5 1153 334 290 31 17 chr13 74474193 74474323 -45809989 - L1MA9 LINE L1 -864 5436 5300 5 1153 180 111 0 0 chr13 74474331 74474358 -45809954 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 5 1153 232 274 0 61 chr13 74474397 74474463 -45809849 - ID4_ SINE ID -18 65 4 5 1153 1083 112 197 5 chr13 74475365 74475553 -45808759 - URR1B DNA MER1_type -1 224 1 5 1153 972 165 70 66 chr13 74475630 74475857 -45808455 + RMER1C Other Other 1115 1342 0 5 1153 1222 254 117 6 chr13 74476032 74476392 -45807920 + MTD LTR MaLR 1 400 -19 5 1153 22 35 0 0 chr13 74476403 74476432 -45807880 + AT_rich Low_complexity Low_complexity 1 29 0 5 1153 462 195 69 0 chr13 74477470 74477557 -45806755 - B1F2 SINE Alu -15 134 42 5 1153 285 241 135 111 chr13 74477557 74477596 -45806716 - ID_B1 SINE B4 -15 209 81 5 1153 279 291 168 43 chr13 74480101 74480309 -45804003 + ORR1E LTR MaLR 21 254 -105 5 1153 24 53 0 0 chr13 74480470 74480508 -45803804 + AT_rich Low_complexity Low_complexity 1 38 0 5 1153 615 67 0 0 chr13 74481150 74481239 -45803073 + (CA)n Simple_repeat Simple_repeat 2 90 0 5 1153 333 241 77 77 chr13 74481261 74481378 -45802934 - PB1D10 SINE Alu 0 117 1 5 1153 23 0 0 0 chr13 74482027 74482050 -45802262 + AT_rich Low_complexity Low_complexity 1 23 0 5 1153 829 181 79 7 chr13 74482125 74482264 -45802048 + B1_Mur1 SINE Alu 1 149 0 5 1153 567 170 175 14 chr13 74483216 74483359 -45800953 + RMER17C LTR ERVK 242 407 -3 5 1153 207 0 0 0 chr13 74483515 74483538 -45800774 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1153 1455 92 5 0 chr13 74483978 74484163 -45800149 + B2_Mm1t SINE B2 2 187 -6 5 1153 350 290 182 8 chr13 74484179 74484311 -45800001 + RSINE1 SINE B4 9 163 -2 6 1153 312 27 0 0 chr13 74484442 74484479 -45799833 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1153 3595 43 0 0 chr13 74485686 74486082 -45798230 + MTA_Mm LTR MaLR 1 396 0 6 1153 462 241 153 0 chr13 74488612 74488782 -45795530 + MER2 DNA MER2_type 22 217 -128 6 1153 216 158 0 0 chr13 74488946 74488984 -45795328 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 1153 722 220 56 7 chr13 74489286 74489428 -45794884 - B1_Mur3 SINE Alu 0 149 1 6 1153 354 254 14 78 chr13 74489924 74490065 -45794247 - MLT2B4 LTR ERVL -424 132 1 6 1153 242 276 184 24 chr13 74490511 74490643 -45793669 + MIRb SINE MIR 62 223 -45 6 1153 3126 96 0 2 chr13 74491327 74491724 -45792588 - MTA_Mm LTR MaLR 0 396 1 6 1153 353 312 94 0 chr13 74492146 74492242 -45792070 - PB1D10 SINE Alu 0 117 13 6 1153 1347 67 0 0 chr13 74492514 74492693 -45791619 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 6 1153 189 0 0 0 chr13 74492694 74492715 -45791597 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 6 1153 459 0 0 0 chr13 74492715 74492765 -45791547 + (TTTC)n Simple_repeat Simple_repeat 1 51 0 6 1153 316 297 0 13 chr13 74492767 74492842 -45791470 - ID4 SINE ID -9 74 1 6 1153 206 297 0 39 chr13 74492945 74493022 -45791290 + CT-rich Low_complexity Low_complexity 4 77 0 6 1153 313 277 64 0 chr13 74493117 74493211 -45791101 - L1MD1 LINE L1 -20 6222 6123 6 1153 1214 63 0 7 chr13 74495152 74495296 -45789016 - B1_Mm SINE Alu -3 144 2 6 1153 411 209 143 0 chr13 74495326 74495417 -45788895 - PB1D10 SINE Alu -2 115 12 6 1153 647 308 185 30 chr13 74495556 74495982 -45788330 - MER68 LTR ERVL -11 552 61 6 1153 190 320 58 67 chr13 74496542 74496646 -45787666 + MIR SINE MIR 42 144 -64 6 1153 587 263 69 19 chr13 74497202 74497361 -45786951 + RMER30 DNA MER1_type 35 201 -1 6 1153 1231 61 0 13 chr13 74497656 74497805 -45786507 - B1_Mus2 SINE Alu 0 147 1 6 1153 225 178 22 0 chr13 74499745 74499790 -45784522 + MLT1F LTR MaLR 491 536 -12 6 1153 1273 125 33 0 chr13 74501986 74502170 -45782142 + B2_Mm2 SINE B2 1 190 -5 1 1153 273 174 0 0 chr13 74502170 74502216 -45782096 - Lx7 LINE L1 -440 7256 7211 2 1153 627 275 29 81 chr13 74502953 74503127 -45781185 - RSINE1 SINE B4 0 165 1 3 1153 527 252 92 0 chr13 74503364 74503483 -45780829 - ID_B1 SINE B4 -8 216 87 4 1153 666 37 0 0 chr13 74503601 74503682 -45780630 + (TC)n Simple_repeat Simple_repeat 1 81 0 5 1153 3254 29 18 13 chr13 74503865 74504249 -45780063 + L1Md_F3 LINE L1 6199 6584 0 6 1153 1874 171 28 50 chr13 74504443 74504806 -45779506 + RMER19B LTR ERVK 310 664 -238 7 1153 900 112 7 20 chr13 74504839 74504985 -45779327 - ORR1A4 LTR MaLR -185 144 1 8 1153 3896 174 107 26 chr13 74504988 74505798 -45778514 + Lx5 LINE L1 6027 6902 -148 9 1153 189 0 0 0 chr13 74505879 74505900 -45778412 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1 1153 229 314 23 46 chr13 74505907 74506037 -45778275 + L1M2 LINE L1 2193 2319 -3821 1 1153 504 0 0 0 chr13 74506110 74506166 -45778146 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1153 605 252 35 7 chr13 74506167 74506311 -45778001 - B3A SINE B2 -50 148 1 1 1153 250 306 92 31 chr13 74506332 74506561 -45777751 + L1M2 LINE L1 2367 2609 -3531 1 1153 258 277 60 0 chr13 74506642 74506725 -45777587 - Lx8 LINE L1 -609 6864 6777 1 1153 1881 170 64 16 chr13 74506726 74507110 -45777202 - MTD LTR MaLR -12 407 13 1 1153 564 276 129 10 chr13 74507125 74507401 -45776911 + L1M2 LINE L1 4509 4823 -1057 1 1153 958 234 0 45 chr13 74507401 74507625 -45776687 - B3 SINE B2 0 216 3 1 1153 512 284 147 58 chr13 74507625 74507695 -45776617 + L1M2 LINE L1 4824 4886 -994 1 1153 313 103 16 18 chr13 74507744 74507805 -45776507 + ORR1B1 LTR MaLR 1 45 -349 1 1153 539 179 8 39 chr13 74507799 74507927 -45776385 + RLTR40 LTR ERVK 412 535 -282 1 1153 310 346 62 44 chr13 74509149 74509533 -45774779 - MurSatRep1 Unknown Unknown 0 2137 1747 1 1153 590 199 56 53 chr13 74509240 74510284 -45774028 - MMSAT4 Satellite Satellite -5 1047 1 2 1153 27 81 0 0 chr13 74510295 74510357 -45773955 + AT_rich Low_complexity Low_complexity 1 62 0 2 1153 237 270 176 21 chr13 74510435 74510628 -45773684 + L1MB5 LINE L1 5707 5929 -245 2 1153 1426 50 38 27 chr13 74510651 74510837 -45773475 + B2_Mm2 SINE B2 1 188 -7 2 1153 37 62 0 0 chr13 74511009 74511074 -45773238 + AT_rich Low_complexity Low_complexity 1 65 0 2 1153 180 0 0 0 chr13 74511298 74511318 -45772994 + (TTA)n Simple_repeat Simple_repeat 1 20 0 2 1153 1281 177 19 5 chr13 74511318 74511528 -45772784 - Lx4A LINE L1 -7 7051 6839 2 1153 2684 119 10 12 chr13 74511528 74511929 -45772383 + Lx4A LINE L1 6462 6861 -197 2 1153 3061 220 104 58 chr13 74512656 74513523 -45770789 + RMER13B LTR ERVK 1 907 -1 2 1153 227 320 0 0 chr13 74513878 74513953 -45770359 - MurSatRep1 Unknown Unknown -1393 744 670 2 1153 624 243 48 41 chr13 74515050 74515196 -45769116 + B1_Mur2 SINE Alu 2 148 -1 2 1153 1256 107 50 11 chr13 74516521 74516700 -45767612 - B2_Mm2 SINE B2 -8 187 2 3 1153 1068 90 7 0 chr13 74516763 74516908 -45767404 - B2_Mm2 SINE B2 -49 146 1 3 1153 705 226 124 10 chr13 74517154 74517355 -45766957 - MTD LTR MaLR 0 419 196 3 1153 444 37 0 0 chr13 74517366 74517420 -45766892 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 3 1153 369 0 0 0 chr13 74517500 74517541 -45766771 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 3 1153 612 246 92 0 chr13 74518178 74518308 -45766004 - B1F2 SINE Alu -5 144 3 3 1153 664 259 119 5 chr13 74518646 74518840 -45765472 + MER20 DNA MER1_type 1 216 -3 3 1153 4722 166 112 70 chr13 74519896 74520743 -45763569 - RMER12 LTR ERVK -85 1237 321 3 1153 1170 36 49 14 chr13 74520743 74520885 -45763427 + B1_Mus1 SINE Alu 2 148 0 3 1153 4722 166 112 70 chr13 74520885 74521197 -45763115 - RMER12 LTR ERVK -1002 320 29 3 1153 531 217 501 24 chr13 74521204 74521387 -45762925 + ORR1D2 LTR MaLR 101 370 0 3 1153 246 246 131 0 chr13 74521489 74521550 -45762762 - B1F SINE Alu -61 88 20 4 1153 23 33 0 0 chr13 74521603 74521633 -45762679 + AT_rich Low_complexity Low_complexity 1 30 0 4 1153 965 211 138 40 chr13 74521650 74521722 -45762590 + Lx7 LINE L1 6756 6849 -847 4 1153 2851 43 9 3 chr13 74521722 74522047 -45762265 + IAPLTR2b LTR ERVK 1 327 0 4 1153 965 211 138 40 chr13 74522047 74522221 -45762091 + Lx7 LINE L1 6850 7026 -670 4 1153 493 266 18 0 chr13 74522215 74522324 -45761988 + Lx7 LINE L1 7184 7294 -402 4 1153 1631 142 256 14 chr13 74522324 74522687 -45761625 + RMER6B LTR ERVK 1 451 -10 4 1153 387 0 0 0 chr13 74522711 74522754 -45761558 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1153 240 35 0 0 chr13 74522880 74522909 -45761403 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1153 1218 65 0 0 chr13 74522909 74523047 -45761265 - B1_Mus1 SINE Alu -10 138 1 4 1153 405 222 120 0 chr13 74523052 74523169 -45761143 + Lx7 LINE L1 7566 7696 0 4 1153 984 99 0 0 chr13 74523180 74523322 -45760990 + (GAAA)n Simple_repeat Simple_repeat 3 144 0 4 1153 486 258 16 55 chr13 74523366 74523493 -45760819 + RSINE1 SINE B4 44 165 0 4 1153 237 65 0 0 chr13 74523502 74523533 -45760779 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1153 21 0 0 0 chr13 74523543 74523564 -45760748 + AT_rich Low_complexity Low_complexity 1 21 0 5 1153 26 0 0 0 chr13 74523661 74523687 -45760625 + AT_rich Low_complexity Low_complexity 1 26 0 5 1153 748 178 30 8 chr13 74523801 74523948 -45760364 + B1F2 SINE Alu 1 149 0 5 1153 2185 158 70 48 chr13 74523996 74524408 -45759904 - MTC LTR MaLR 0 421 1 5 1153 744 69 26 0 chr13 74525251 74525367 -45758945 + (CA)n Simple_repeat Simple_repeat 2 120 0 5 1153 726 262 29 11 chr13 74525373 74525547 -45758765 - B4 SINE B4 -22 270 94 5 1153 501 164 100 0 chr13 74525602 74525712 -45758600 + RLTR28 LTR ERVL 24 144 -380 5 1153 304 257 14 0 chr13 74525808 74525882 -45758430 - ID_B1 SINE B4 -59 165 91 5 1153 5673 59 0 3 chr13 74525912 74526576 -45757736 + L1_Mus1 LINE L1 5906 6567 0 5 1153 1155 68 56 0 chr13 74527341 74527502 -45756810 - B2_Mm2 SINE B2 -14 181 12 6 1153 9749 116 29 14 chr13 74528999 74530595 -45753717 - Lx2 LINE L1 -20 6977 5362 6 1153 1202 65 0 0 chr13 74530595 74530733 -45753579 - B1_Mus2 SINE Alu -9 138 1 6 1153 9749 154 17 56 chr13 74530733 74532051 -45752261 - Lx2 LINE L1 -516 5361 4097 6 1153 481 291 30 7 chr13 74533045 74533180 -45751132 + B3 SINE B2 70 207 -9 6 1153 219 36 0 0 chr13 74533962 74533990 -45750322 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 6 1153 457 272 87 25 chr13 74534389 74534585 -45749727 - RLTR42-int LTR ERVK -1046 4476 4269 6 1153 234 0 0 0 chr13 74534809 74534835 -45749477 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1153 675 70 3 12 chr13 74534961 74535060 -45749252 + B1_Mus2 SINE Alu 28 147 0 6 1153 226 131 30 90 chr13 74535671 74535805 -45748507 + (CCCTAA)n Simple_repeat Simple_repeat 5 130 0 6 1153 1493 78 5 15 chr13 74535897 74536092 -45748220 + B2_Mm1t SINE B2 1 193 0 6 1153 416 308 52 95 chr13 74536143 74536498 -45747814 + MT2A LTR ERVL 110 601 0 7 1153 192 40 0 0 chr13 74536505 74536530 -45747782 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1153 852 28 9 0 chr13 74537489 74537598 -45746714 + B1_Mus1 SINE Alu 1 110 -38 7 1153 1318 223 36 56 chr13 74537598 74538045 -45746267 - L1_Mur3 LINE L1 -4124 1756 1319 7 1153 721 250 12 32 chr13 74538347 74538599 -45745713 - L1_Mur3 LINE L1 -6622 1106 860 7 1153 316 334 118 19 chr13 74538628 74539101 -45745211 - L1_Mur3 LINE L1 -7059 669 47 7 1153 2274 162 14 108 chr13 74539519 74540037 -45744275 - Lx4B LINE L1 -953 6105 5637 7 1153 1415 319 88 45 chr13 74540046 74540690 -45743622 + ORR1D-int LTR MaLR 562 1233 -137 7 1153 985 87 0 0 chr13 74540690 74540816 -45743496 + B1_Mm SINE Alu 1 126 -21 7 1153 180 0 0 0 chr13 74540816 74540836 -45743476 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1153 517 252 49 7 chr13 74540836 74540980 -45743332 + ORR1D-int LTR MaLR 1380 1529 -51 7 1153 3274 181 55 16 chr13 74541176 74541851 -45742461 - Lx4B LINE L1 -4 7054 6354 7 1153 225 194 30 75 chr13 74542027 74542094 -45742218 - B1_Mus2 SINE Alu 0 147 84 7 1153 465 344 21 10 chr13 74542323 74542517 -45741795 - B3 SINE B2 -19 197 2 8 1153 717 174 7 32 chr13 74542613 74542767 -45741545 + MurSatRep1 Unknown Unknown 1 150 -1987 8 1153 437 276 73 8 chr13 74542769 74542893 -45741419 - B1_Mur2 SINE Alu -17 132 1 8 1153 5410 152 21 20 chr13 74542893 74543837 -45740475 + MurSatRep1 Unknown Unknown 284 1228 -909 8 1153 3934 175 41 19 chr13 74544783 74545558 -45738754 + MurSatRep1 Unknown Unknown 1193 1984 -153 8 1153 6683 79 99 1 chr13 74545563 74546493 -45737819 - L1_Mus3 LINE L1 -2 6636 5616 8 1153 732 282 50 30 chr13 74546493 74547098 -45737214 + MurSatRep1 Unknown Unknown 1747 2137 0 8 1153 3627 226 103 96 chr13 74547100 74548566 -45735746 + ORR1A4-int LTR MaLR 464 1771 -192 8 1153 1288 85 34 11 chr13 74548566 74548745 -45735567 - B2_Mm1t SINE B2 -8 185 3 8 1153 3627 204 112 107 chr13 74548745 74548871 -45735441 + ORR1A4-int LTR MaLR 1663 1792 0 8 1153 1375 172 0 93 chr13 74548871 74549172 -45735140 + ORR1A4 LTR MaLR 1 273 -56 8 1153 2238 119 3 59 chr13 74549175 74549531 -45734781 - Lx LINE L1 -2 6652 6317 8 1153 2005 145 188 0 chr13 74550438 74550810 -45733502 - BGLII_A LTR ERVK -3 442 1 8 1153 5317 164 79 6 chr13 74550811 74551978 -45732334 - MYSERV16_I-int LTR ERVK -1 2325 1032 8 1153 230 301 50 70 chr13 74551979 74552079 -45732233 - RMER4A LTR ERVK -47 419 322 8 1153 1769 274 87 47 chr13 74552100 74553285 -45731027 - MYSERV16_I-int LTR ERVK -1925 4625 3963 8 1153 607 49 37 0 chr13 74553299 74553380 -45730932 - LTRIS3 LTR ERV1 0 512 429 9 1153 2138 210 110 30 chr13 74553388 74553963 -45730349 - MuRRS4-int LTR ERV1 -3637 1426 806 9 1153 4291 144 54 17 chr13 74553942 74554650 -45729662 - RMER16-int LTR ERVK -3988 1418 685 9 1153 1034 124 66 17 chr13 74554631 74554812 -45729500 - RMER16-int LTR ERVK -5075 331 142 9 1153 724 114 55 13 chr13 74555158 74555329 -45728983 - MuRRS4-int LTR ERV1 -3006 293 63 9 1153 318 182 33 83 chr13 74555358 74555478 -45728834 - MuRRS4-int LTR ERV1 -3584 114 1 9 1153 3800 43 14 22 chr13 74555479 74555978 -45728334 - LTRIS2 LTR ERV1 -1 563 69 9 1153 649 184 0 0 chr13 74555996 74556110 -45728202 - MYSERV6-int LTR ERVK -4794 4165 4052 9 1153 1648 154 92 0 chr13 74556110 74556403 -45727909 + IAPEY3_LTR LTR ERVK 1 320 -12 9 1153 493 258 0 8 chr13 74556413 74556534 -45727778 + L1VL4 LINE L1 207 326 -5976 9 1153 22 94 0 0 chr13 74556735 74556799 -45727513 + AT_rich Low_complexity Low_complexity 1 64 0 9 1153 22 80 0 0 chr13 74556879 74556929 -45727383 + AT_rich Low_complexity Low_complexity 1 50 0 9 1153 36970 54 5 6 chr13 74556929 74562882 -45721430 - L1Md_F2 LINE L1 0 6582 643 9 1153 2780 158 2 2 chr13 74563465 74563927 -45720385 + L1_Mur2 LINE L1 4761 5222 -655 9 1153 1548 66 0 0 chr13 74563940 74564152 -45720160 - L1_Mm LINE L1 -2490 3393 3182 1 1153 2920 60 1 8 chr13 74564148 74564563 -45719749 - L1_Mur1 LINE L1 -2326 1586 1173 1 1153 7755 69 16 2 chr13 74564611 74566155 -45718157 - L1_Mus1 LINE L1 -2 6565 4999 1 1153 2065 304 45 26 chr13 74566167 74566971 -45717341 - MYSERV6-int LTR ERVK -7689 1270 452 9 1153 1057 102 155 6 chr13 74567754 74567922 -45716390 - B2_Mm2 SINE B2 -1 194 2 1 1153 2305 148 102 0 chr13 74568488 74568892 -45715420 - BGLII_A LTR ERVK 0 445 1 1 1153 1654 27 0 36 chr13 74569163 74569355 -45714957 - B2_Mm1t SINE B2 -8 185 1 1 1153 1113 115 0 0 chr13 74570089 74570237 -45714075 - B1_Mus1 SINE Alu 0 148 1 1 1153 1877 143 20 80 chr13 74570318 74570668 -45713644 - ORR1A4 LTR MaLR 0 329 1 1 1153 4173 179 116 82 chr13 74570668 74571794 -45712518 - ORR1A4-int LTR MaLR 0 1792 628 1 1153 550 212 99 56 chr13 74571745 74571997 -45712315 - MT2B LTR ERVL -327 274 1 1 1153 262 161 194 0 chr13 74571998 74572060 -45712252 - MERVL_2A-int LTR ERVL -2 5759 5686 1 1153 278 279 36 24 chr13 74572060 74572255 -45712057 - MMSAT4 Satellite Satellite -24 197 1 1 1153 735 314 68 41 chr13 74572283 74572369 -45711943 - MurSatRep1 Unknown Unknown 0 2137 2090 1 1153 432 280 7 7 chr13 74572369 74572591 -45711721 - MMSAT4 Satellite Satellite 0 222 1 1 1153 735 314 68 41 chr13 74572591 74573308 -45711004 - MurSatRep1 Unknown Unknown 0 2089 1687 1 1153 4104 160 48 19 chr13 74573292 74574062 -45710250 - MurSatRep1 Unknown Unknown -1 2136 1345 1 1153 1475 94 16 0 chr13 74574064 74574256 -45710056 + B2_Mm2 SINE B2 1 195 0 1 1153 5981 158 13 37 chr13 74574333 74574507 -45709805 - MurSatRep1 Unknown Unknown -789 1348 1180 1 1153 3068 49 0 0 chr13 74574507 74574853 -45709459 + ORR1A0 LTR MaLR 1 346 0 1 1153 5981 158 13 37 chr13 74574853 74575769 -45708543 - MurSatRep1 Unknown Unknown -958 1179 284 1 1153 400 285 73 0 chr13 74575769 74575892 -45708420 + B1_Mur2 SINE Alu 1 132 -17 1 1153 874 131 0 40 chr13 74575895 74576046 -45708266 - MurSatRep1 Unknown Unknown -1988 149 5 1 1153 410 369 10 10 chr13 74576138 74576335 -45707977 + B3 SINE B2 2 198 -18 1 1153 214 184 20 20 chr13 74576608 74576658 -45707654 + B1_Mus2 SINE Alu 98 147 0 1 1153 21 0 0 0 chr13 74576666 74576687 -45707625 + AT_rich Low_complexity Low_complexity 1 21 0 1 1153 2144 216 29 19 chr13 74576841 74577273 -45707039 + Lx4B LINE L1 6565 6997 -61 1 1153 180 0 0 0 chr13 74577273 74577293 -45707019 + (TGGGGG)n Simple_repeat Simple_repeat 2 21 0 1 1153 2144 216 29 19 chr13 74577293 74577342 -45706970 + Lx4B LINE L1 6998 7051 -7 1 1153 321 305 12 0 chr13 74578572 74578654 -45705658 - ORR1D-int LTR MaLR -52 1528 1446 1 1153 1039 337 50 61 chr13 74578669 74579292 -45705020 - ORR1D-int LTR MaLR -193 1177 562 1 144 3603 186 80 77 chr13 74579302 74580041 -45704271 + Lx4B LINE L1 5637 6387 -671 1 1154 1306 93 33 0 chr13 74580041 74580224 -45704088 + B2_Mm1t SINE B2 1 189 -4 1 1154 3603 186 80 77 chr13 74580224 74580434 -45703878 + Lx4B LINE L1 6388 6589 -469 1 1154 2657 288 54 30 chr13 74580444 74580990 -45703322 + Lx6 LINE L1 5781 6341 -1119 1 1154 1725 131 126 13 chr13 74580990 74581300 -45703012 + IAPLTR4 LTR ERVK 1 345 0 1 1154 2657 288 54 30 chr13 74581300 74581639 -45702673 + Lx6 LINE L1 6342 6687 -773 1 1154 1250 291 16 23 chr13 74581641 74582028 -45702284 + Lx6 LINE L1 7060 7443 -17 1 1154 193 368 40 0 chr13 74582384 74582460 -45701852 - MER5A DNA MER1_type -77 112 34 1 1154 1083 122 0 0 chr13 74582580 74582728 -45701584 - B1_Mus1 SINE Alu 0 148 1 1 1154 1991 151 11 69 chr13 74582809 74583158 -45701154 - ORR1A4 LTR MaLR 0 329 1 1 1154 4830 155 115 83 chr13 74583158 74584302 -45700010 - ORR1A4-int LTR MaLR 0 1963 783 1 1154 559 231 95 47 chr13 74584248 74584489 -45699823 - MT2B LTR ERVL -336 265 1 1 1154 267 175 191 0 chr13 74584490 74584553 -45699759 - MERVL_2A-int LTR ERVL -2 5759 5685 1 1154 371 284 60 59 chr13 74584553 74584825 -45699487 - MurSatRep1 Unknown Unknown -88 2049 1744 1 1154 439 295 4 4 chr13 74584776 74585166 -45699146 - MMSAT4 Satellite Satellite 0 390 1 1 1154 472 317 66 45 chr13 74585110 74585453 -45698859 - MurSatRep1 Unknown Unknown 0 2137 1863 1 1154 475 269 0 0 chr13 74585453 74585587 -45698725 - MMSAT4 Satellite Satellite -5 163 30 1 1154 472 317 66 45 chr13 74585587 74585731 -45698581 - MurSatRep1 Unknown Unknown 0 1862 1747 1 1154 411 285 19 19 chr13 74585616 74586006 -45698306 - MMSAT4 Satellite Satellite 0 390 1 1 1154 302 372 11 5 chr13 74585863 74586047 -45698265 - MurSatRep1 Unknown Unknown -88 2049 1865 1 1154 4041 176 13 19 chr13 74586066 74586820 -45697492 - MurSatRep1 Unknown Unknown -43 2094 1345 1 1154 1414 92 43 0 chr13 74586822 74587006 -45697306 + B2_Mm2 SINE B2 1 192 -3 1 1154 5737 175 11 28 chr13 74587053 74588148 -45696164 - MurSatRep1 Unknown Unknown -780 1357 282 1 1154 392 302 76 0 chr13 74588150 74588269 -45696043 + B1_Mur2 SINE Alu 5 132 -17 1 1154 670 149 78 50 chr13 74588272 74588413 -45695899 - MurSatRep1 Unknown Unknown -1988 149 5 1 1154 424 339 36 16 chr13 74588517 74588709 -45695603 + B3 SINE B2 2 197 -19 1 1154 21 0 0 0 chr13 74589040 74589061 -45695251 + AT_rich Low_complexity Low_complexity 1 21 0 1 1154 1651 228 34 69 chr13 74589222 74589688 -45694624 + Lx4B LINE L1 6573 7022 -36 1 1154 21 0 0 0 chr13 74589705 74589726 -45694586 + AT_rich Low_complexity Low_complexity 1 21 0 1 1154 255 257 74 65 chr13 74589791 74589899 -45694413 - ORR1E LTR MaLR -241 118 10 1 1154 1364 318 110 33 chr13 74589870 74590690 -45693622 - ORR1E-int LTR MaLR -13 1567 562 1 1154 3255 199 52 86 chr13 74590700 74591441 -45692871 + Lx4B LINE L1 5637 6387 -671 1 1154 1221 104 65 5 chr13 74591441 74591625 -45692687 + B2_Mm2 SINE B2 1 195 0 1 1154 3255 199 52 86 chr13 74591625 74591756 -45692556 + Lx4B LINE L1 6388 6479 -579 1 1154 207 146 0 0 chr13 74591764 74591805 -45692507 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 1 1154 2143 80 0 0 chr13 74591820 74592084 -45692228 - L1_Mus1 LINE L1 0 6567 6304 1 1154 281 125 83 0 chr13 74592113 74592161 -45692151 + Lx4B LINE L1 6538 6589 -469 1 1154 2173 297 82 47 chr13 74592171 74592651 -45691661 + Lx6 LINE L1 5781 6297 -1163 1 1154 1204 75 0 13 chr13 74592651 74592800 -45691512 + B1_Mm SINE Alu 1 147 0 1 1154 2173 297 82 47 chr13 74592800 74593196 -45691116 + Lx6 LINE L1 6298 6688 -772 1 1154 279 0 0 0 chr13 74593215 74593246 -45691066 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1154 247 231 12 82 chr13 74593816 74593901 -45690411 + L1MA10 LINE L1 6216 6294 -40 1 1154 598 255 43 0 chr13 74594966 74595150 -45689162 - RMER10A LTR ERVL 0 442 251 1 1154 1253 172 43 31 chr13 74595165 74595423 -45688889 + RMER10B LTR ERVL 17 277 -121 1 1154 339 44 0 0 chr13 74595436 74595481 -45688831 + (CTAAT)n Simple_repeat Simple_repeat 4 48 0 1 1154 596 242 30 52 chr13 74595563 74595773 -45688539 - RMER10A LTR ERVL -192 206 1 1 1154 1154 74 18 0 chr13 74597573 74597736 -45686576 - L1Md_F2 LINE L1 0 6582 6417 1 1154 983 86 0 28 chr13 74597861 74598005 -45686307 + B2_Mm2 SINE B2 2 141 -54 1 1154 188 67 33 0 chr13 74598011 74598041 -45686271 + (TA)n Simple_repeat Simple_repeat 1 31 0 1 1154 1030 131 7 0 chr13 74598242 74598387 -45685925 + B1_Mus1 SINE Alu 3 148 0 1 1154 276 100 0 0 chr13 74598387 74598427 -45685885 + (A)n Simple_repeat Simple_repeat 1 40 0 1 1154 1947 226 27 22 chr13 74598716 74599205 -45685107 - Lx2B LINE L1 -19 6981 6491 1 1154 386 291 27 142 chr13 74601158 74601519 -45682793 - MT2A LTR ERVL -24 577 277 1 1154 223 131 0 115 chr13 74601603 74601707 -45682605 + (TTAGGG)n Simple_repeat Simple_repeat 3 94 0 1 1154 1097 155 27 11 chr13 74602347 74602530 -45681782 - B2_Mm2 SINE B2 -8 187 2 1 1154 331 338 34 15 chr13 74603705 74603909 -45680403 + RLTR42-int LTR ERVK 4032 4239 -1283 1 1154 2934 173 7 6 chr13 74604605 74605151 -45679161 + L1_Mur2 LINE L1 4750 5296 -581 1 1154 798 88 9 0 chr13 74605152 74605266 -45679046 + B1_Mus1 SINE Alu 34 148 0 1 1154 1490 83 35 17 chr13 74605285 74605517 -45678795 - L1_Mur1 LINE L1 -410 5476 5241 1 1154 1115 98 0 0 chr13 74605545 74605688 -45678624 + B1_Mus2 SINE Alu 5 147 0 1 1154 252 0 0 0 chr13 74606134 74606162 -45678150 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1154 195 42 0 0 chr13 74606229 74606253 -45678059 + (TTA)n Simple_repeat Simple_repeat 2 25 0 1 1154 545 276 32 32 chr13 74606850 74607097 -45677215 - L1_Mur3 LINE L1 -6622 1090 844 1 1154 304 326 95 19 chr13 74607130 74607407 -45676905 - L1_Mur3 LINE L1 -7446 266 2 1 1154 678 350 61 28 chr13 74609191 74609550 -45674762 + MTD LTR MaLR 33 403 -16 1 1154 607 322 44 15 chr13 74609608 74609870 -45674442 + ORR1D-int LTR MaLR 44 346 -1234 1 1154 6523 196 21 6 chr13 74609871 74611130 -45673182 - Lx4B LINE L1 -144 6914 5637 1 1154 2073 305 47 34 chr13 74611139 74611931 -45672381 + ORR1D-int LTR MaLR 562 1363 -7 1 1154 789 136 71 33 chr13 74611927 74612109 -45672203 - RMER17B LTR ERVK -590 368 180 1 1154 233 106 106 0 chr13 74612142 74612189 -45672123 + Lx9 LINE L1 7515 7566 -78 1 1154 854 220 65 5 chr13 74612207 74612408 -45671904 - RMER10A LTR ERVL 0 442 230 1 1154 705 238 73 45 chr13 74612390 74612677 -45671635 + RMER10B LTR ERVL 17 362 -36 1 1154 950 218 67 46 chr13 74612697 74612937 -45671375 - RMER10A LTR ERVL -197 245 1 1 1154 2364 98 126 6 chr13 74613211 74613559 -45670753 + RLTR10 LTR ERVK 1 390 0 1 1154 227 253 92 13 chr13 74613919 74613995 -45670317 + RLTR23 LTR ERV1 349 430 0 1 1154 1098 37 0 0 chr13 74615380 74615516 -45668796 - B1_Mus1 SINE Alu 0 148 13 1 1154 23 54 0 0 chr13 74615612 74615649 -45668663 + AT_rich Low_complexity Low_complexity 1 37 0 1 1154 1102 122 0 0 chr13 74617227 74617375 -45666937 - B1_Mus1 SINE Alu 0 148 1 1 1154 1404 135 14 14 chr13 74617456 74617674 -45666638 - ORR1B1 LTR MaLR 0 394 177 1 1154 412 276 64 54 chr13 74617783 74617986 -45666326 - MurSatRep1 Unknown Unknown -88 2049 1845 1 1154 476 273 15 15 chr13 74617955 74618597 -45665715 - MMSAT4 Satellite Satellite 0 642 1 1 1154 379 330 57 26 chr13 74618373 74618638 -45665674 - MurSatRep1 Unknown Unknown 0 2137 1865 1 1154 9351 170 16 60 chr13 74618657 74619406 -45664906 - MurSatRep1 Unknown Unknown -43 2094 1356 1 1154 1354 100 44 0 chr13 74619406 74619586 -45664726 + B2_Mm2 SINE B2 1 188 -7 1 1154 9351 170 16 60 chr13 74619586 74620729 -45663583 - MurSatRep1 Unknown Unknown -782 1355 284 1 1154 421 293 73 0 chr13 74620729 74620852 -45663460 + B1_Mur2 SINE Alu 1 132 -17 1 1154 829 130 0 48 chr13 74620855 74621000 -45663312 - MurSatRep1 Unknown Unknown -1988 149 12 1 1154 435 346 31 20 chr13 74621111 74621306 -45663006 + B3 SINE B2 2 198 -18 1 1154 214 184 20 20 chr13 74621577 74621627 -45662685 + B1_Mus2 SINE Alu 98 147 0 1 1154 1117 82 0 14 chr13 74621665 74621813 -45662499 + B1_Mus2 SINE Alu 2 147 0 1 1154 246 32 0 0 chr13 74621814 74621845 -45662467 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1154 1567 244 36 74 chr13 74622006 74622507 -45661805 + Lx4B LINE L1 6573 7054 -4 2 1154 238 290 98 61 chr13 74622555 74622687 -45661625 - ORR1E LTR MaLR -213 146 10 2 1154 1547 329 57 37 chr13 74622702 74623488 -45660824 - ORR1E-int LTR MaLR -7 1363 562 2 1154 2978 208 60 42 chr13 74623505 74624233 -45660079 + Lx4B LINE L1 5643 6387 -671 2 1154 1188 138 32 0 chr13 74624233 74624421 -45659891 + B2_Mm2 SINE B2 1 194 -1 2 1154 2978 208 60 42 chr13 74624421 74624439 -45659873 + Lx4B LINE L1 6388 6403 -655 2 1154 339 25 0 0 chr13 74624445 74624485 -45659827 + (GAAAA)n Simple_repeat Simple_repeat 1 40 0 2 1154 590 212 8 0 chr13 74624487 74624605 -45659707 + Lx4B LINE L1 6372 6490 -568 2 1154 222 62 0 0 chr13 74624605 74624637 -45659675 + (TTTC)n Simple_repeat Simple_repeat 4 35 0 2 1154 1970 100 4 0 chr13 74624661 74624921 -45659391 - L1_Mus1 LINE L1 -3 6564 6304 2 1154 280 92 431 0 chr13 74624924 74624989 -45659323 + Lx4B LINE L1 6484 6576 -482 2 1154 2429 287 81 31 chr13 74625008 74625489 -45658823 + Lx6 LINE L1 5781 6302 -1158 2 1154 1072 103 14 14 chr13 74625489 74625636 -45658676 + B1_Mm SINE Alu 1 147 0 2 1154 2429 287 81 31 chr13 74625636 74626018 -45658294 + Lx6 LINE L1 6303 6687 -773 2 1154 810 280 18 5 chr13 74626020 74626239 -45658073 + Lx6 LINE L1 7060 7281 -179 2 1154 709 219 45 0 chr13 74626376 74626554 -45657758 - RMER10A LTR ERVL -6 436 251 2 1154 1468 172 150 3 chr13 74626569 74626902 -45657410 + RMER10B LTR ERVL 17 398 0 2 1154 755 237 115 10 chr13 74626942 74627151 -45657161 - RMER10A LTR ERVL -211 231 1 2 1154 1233 104 66 6 chr13 74629062 74629212 -45655100 + B2_Mm2 SINE B2 2 153 -42 2 1154 315 0 0 0 chr13 74629212 74629247 -45655065 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 1154 1233 104 66 6 chr13 74629247 74629279 -45655033 + B2_Mm2 SINE B2 154 194 -1 2 1154 1055 90 7 40 chr13 74629470 74629603 -45654709 + B1_Mus1 SINE Alu 3 136 -12 2 1154 354 80 0 0 chr13 74629603 74629653 -45654659 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 2 1154 1055 90 7 40 chr13 74629653 74629670 -45654642 + B1_Mus1 SINE Alu 137 148 0 2 1154 204 139 28 0 chr13 74629955 74629991 -45654321 + CT-rich Low_complexity Low_complexity 2 38 0 2 1154 1837 237 29 26 chr13 74629992 74630482 -45653830 - Lx2B LINE L1 -19 6981 6491 2 1154 386 279 20 145 chr13 74632411 74632771 -45651541 - MT2A LTR ERVL -24 577 277 2 1154 230 229 16 16 chr13 74632789 74632851 -45651461 - MT2A LTR ERVL -401 132 71 2 1154 214 153 58 58 chr13 74632855 74632959 -45651353 + (TTAGGG)n Simple_repeat Simple_repeat 3 106 0 2 1154 1178 146 16 11 chr13 74633591 74633778 -45650534 - B2_Mm2 SINE B2 -6 189 2 2 1154 1175 55 7 27 chr13 74634880 74635030 -45649282 + B1_Mus1 SINE Alu 2 148 0 2 1154 448 304 34 19 chr13 74635129 74635334 -45648978 + RLTR42-int LTR ERVK 4032 4239 -1283 2 1154 2743 164 4 2 chr13 74636041 74636516 -45647796 + L1_Mur2 LINE L1 4761 5236 -641 2 1154 241 259 53 145 chr13 74636516 74636647 -45647665 + RLTR25B LTR ERVK 391 509 -519 2 1154 717 114 18 0 chr13 74636575 74636689 -45647623 + B1_Mus1 SINE Alu 33 148 0 2 1154 1586 72 31 9 chr13 74636708 74636931 -45647381 - L1_Mur1 LINE L1 -409 5477 5250 2 1154 24 53 0 0 chr13 74636931 74636969 -45647343 + AT_rich Low_complexity Low_complexity 1 38 0 2 1154 189 0 0 0 chr13 74636979 74637000 -45647312 + (CACAG)n Simple_repeat Simple_repeat 5 25 0 2 1154 22 56 0 0 chr13 74637460 74637496 -45646816 + AT_rich Low_complexity Low_complexity 1 36 0 2 1154 519 280 32 32 chr13 74638117 74638364 -45645948 - L1_Mur3 LINE L1 -6622 1090 844 2 1154 327 337 110 14 chr13 74638397 74638743 -45645569 - L1_Mur3 LINE L1 -7204 508 130 2 1154 3077 43 0 0 chr13 74640886 74641232 -45643080 + ORR1A0 LTR MaLR 1 346 0 2 1154 1034 66 0 0 chr13 74642117 74642253 -45642059 - B1_Mus1 SINE Alu 0 148 13 2 1154 270 160 0 0 chr13 74642353 74642403 -45641909 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1154 197 357 43 0 chr13 74643783 74643853 -45640459 - MER5A DNA MER1_type -77 112 40 2 1154 1061 128 0 0 chr13 74643979 74644127 -45640185 - B1_Mus1 SINE Alu 0 148 1 2 1154 1972 145 11 77 chr13 74644208 74644560 -45639752 - ORR1A4 LTR MaLR 0 329 1 2 1154 2927 176 58 116 chr13 74644560 74645344 -45638968 - ORR1A4-int LTR MaLR 0 1963 491 2 1154 2588 34 0 12 chr13 74645344 74645670 -45638642 - RLTRETN_Mm LTR ERVK 0 322 1 2 1154 2067 144 11 0 chr13 74645670 74646025 -45638287 - ORR1A3-int LTR MaLR -822 1141 783 2 1154 552 236 94 48 chr13 74645971 74646213 -45638099 - MT2B LTR ERVL -336 265 1 2 1154 302 145 194 0 chr13 74646214 74646276 -45638036 - MERVL_2A-int LTR ERVL -2 5759 5686 2 1154 262 231 54 36 chr13 74646276 74646388 -45637924 - MMSAT4 Satellite Satellite -24 144 31 2 1154 385 263 74 64 chr13 74646329 74646532 -45637780 - MurSatRep1 Unknown Unknown -88 2049 1845 2 1154 424 306 7 7 chr13 74646501 74646735 -45637577 - MMSAT4 Satellite Satellite 0 234 1 2 1154 450 316 67 35 chr13 74646667 74646753 -45637559 - MurSatRep1 Unknown Unknown 0 2137 1972 2 1154 489 253 13 13 chr13 74646753 74646905 -45637407 - MMSAT4 Satellite Satellite 0 168 17 2 1154 450 316 67 35 chr13 74646905 74647005 -45637307 - MurSatRep1 Unknown Unknown -166 1971 1778 2 1154 427 274 22 22 chr13 74647005 74647143 -45637169 - MMSAT4 Satellite Satellite 0 168 31 2 1154 450 316 67 35 chr13 74647143 74647184 -45637128 - MurSatRep1 Unknown Unknown 0 1777 1691 2 1154 3961 185 12 19 chr13 74647203 74647958 -45636354 - MurSatRep1 Unknown Unknown -43 2094 1345 2 1154 1246 123 43 0 chr13 74647960 74648147 -45636165 + B2_Mm2 SINE B2 1 195 0 2 1154 5672 182 15 14 chr13 74648192 74649265 -45635047 - MurSatRep1 Unknown Unknown -780 1357 284 2 1154 435 293 73 0 chr13 74649265 74649388 -45634924 + B1_Mur2 SINE Alu 1 132 -17 2 1154 742 174 7 40 chr13 74649391 74649541 -45634771 - MurSatRep1 Unknown Unknown -1988 149 5 2 1154 448 361 15 5 chr13 74649645 74649840 -45634472 + B3 SINE B2 2 198 -18 2 1154 210 184 20 20 chr13 74650111 74650161 -45634151 + B1_Mus2 SINE Alu 98 147 0 2 1154 22 0 0 0 chr13 74650163 74650185 -45634127 + AT_rich Low_complexity Low_complexity 1 22 0 2 1154 1448 252 44 74 chr13 74650346 74650843 -45633469 + Lx4B LINE L1 6573 7054 -4 2 1154 1644 293 63 35 chr13 74650997 74651824 -45632488 - ORR1D-int LTR MaLR -13 1567 562 2 1154 3153 217 51 95 chr13 74651831 74652562 -45631750 + Lx4B LINE L1 5660 6387 -671 2 1154 1150 129 43 5 chr13 74652562 74652749 -45631563 + B2_Mm2 SINE B2 1 194 -1 2 1154 3153 216 52 98 chr13 74652749 74652943 -45631369 + Lx4B LINE L1 6388 6514 -544 2 1154 1985 90 8 4 chr13 74652943 74653210 -45631102 - L1_Mus1 LINE L1 -3 6564 6297 2 1154 3153 216 52 98 chr13 74653210 74653271 -45631041 + Lx4B LINE L1 6515 6576 -482 2 1154 1319 301 46 94 chr13 74653290 74653771 -45630541 + Lx6 LINE L1 5781 6242 -1218 2 1154 1228 61 0 13 chr13 74653771 74653920 -45630392 + B1_Mm SINE Alu 1 147 0 2 1154 1319 301 46 94 chr13 74653920 74654004 -45630308 + Lx6 LINE L1 6243 6297 -1163 2 1154 1789 31 0 0 chr13 74654004 74654196 -45630116 + B2_Mm1a SINE B2 2 193 0 2 1154 1319 301 46 94 chr13 74654196 74654582 -45629730 + Lx6 LINE L1 6298 6687 -773 2 1154 827 297 0 18 chr13 74654584 74654810 -45629502 + Lx6 LINE L1 7060 7281 -179 2 1154 623 208 109 6 chr13 74654927 74655101 -45629211 - RMER10A LTR ERVL 0 442 251 2 1154 1217 172 46 39 chr13 74655116 74655376 -45628936 + RMER10B LTR ERVL 17 278 -120 2 1154 489 34 0 0 chr13 74655388 74655447 -45628865 + (CTAAT)n Simple_repeat Simple_repeat 4 62 0 2 1154 601 249 57 30 chr13 74655538 74655739 -45628573 - RMER10A LTR ERVL -200 198 1 2 1154 1192 144 37 0 chr13 74657644 74657831 -45626481 + B2_Mm2 SINE B2 2 195 0 2 1154 1117 83 14 0 chr13 74658026 74658170 -45626142 + B1_Mus1 SINE Alu 3 148 0 2 1154 261 83 0 0 chr13 74658170 74658206 -45626106 + (GAAAA)n Simple_repeat Simple_repeat 2 37 0 2 1154 1921 216 35 31 chr13 74658501 74658988 -45625324 - Lx2B LINE L1 -21 6979 6491 2 1154 372 280 7 69 chr13 74660938 74661135 -45623177 - MT2A LTR ERVL -38 563 345 2 1154 247 221 27 68 chr13 74661216 74661289 -45623023 - MT2A LTR ERVL -238 346 277 2 1154 235 143 58 58 chr13 74661373 74661477 -45622835 + (TTAGGG)n Simple_repeat Simple_repeat 3 106 0 2 1154 1144 148 27 11 chr13 74662113 74662297 -45622015 - B2_Mm2 SINE B2 -6 189 3 2 1154 1344 20 0 0 chr13 74662318 74662464 -45621848 - B1_Mus2 SINE Alu 0 147 2 2 1154 1198 62 0 14 chr13 74663574 74663721 -45620591 + B1_Mus2 SINE Alu 3 147 0 2 1154 213 39 0 0 chr13 74663721 74663747 -45620565 + (CAAAAA)n Simple_repeat Simple_repeat 5 30 0 2 1154 1448 45 85 0 chr13 74664218 74664235 -45620077 - B2_Mm1a SINE B2 -1 192 176 2 1154 207 0 0 0 chr13 74664235 74664258 -45620054 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2 1154 1448 45 85 0 chr13 74664258 74664417 -45619895 - B2_Mm1a SINE B2 -18 175 2 2 1154 2740 165 2 2 chr13 74664936 74665404 -45618908 + L1_Mur2 LINE L1 4761 5228 -649 2 1154 284 241 53 145 chr13 74665412 74665543 -45618769 + RLTR25B LTR ERVK 391 509 -519 2 1154 742 114 18 0 chr13 74665471 74665585 -45618727 + B1_Mus1 SINE Alu 33 148 0 2 1154 1527 87 30 25 chr13 74665604 74665840 -45618472 - L1_Mur1 LINE L1 -409 5477 5241 2 1154 22 0 0 0 chr13 74665843 74665865 -45618447 + AT_rich Low_complexity Low_complexity 1 22 0 2 1154 1296 14 44 1 chr13 74665889 74668551 -45615761 + (CACAG)n Simple_repeat Simple_repeat 1 2775 0 2 1154 22 56 0 0 chr13 74669006 74669042 -45615270 + AT_rich Low_complexity Low_complexity 1 36 0 2 1154 508 247 83 54 chr13 74669663 74669903 -45614409 - L1_Mur3 LINE L1 -6622 1090 844 2 1154 375 360 42 19 chr13 74669959 74670386 -45613926 - L1_Mur3 LINE L1 -7245 467 31 2 1154 31 58 0 0 chr13 74672103 74672155 -45612157 + AT_rich Low_complexity Low_complexity 1 52 0 2 1154 207 0 0 0 chr13 74672168 74672191 -45612121 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1154 201 74 0 0 chr13 74672720 74672747 -45611565 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2 1154 582 336 81 50 chr13 74673228 74673588 -45610724 + MTD LTR MaLR 33 403 -16 2 1154 342 0 0 0 chr13 74673600 74673638 -45610674 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 1154 537 321 46 17 chr13 74673673 74673935 -45610377 + MTE-int LTR MaLR 44 346 -1234 2 1154 4805 183 19 6 chr13 74673936 74674841 -45609471 - Lx4B LINE L1 -144 6914 5998 2 1154 21 0 0 0 chr13 74674841 74674862 -45609450 + AT_rich Low_complexity Low_complexity 1 21 0 2 1154 315 333 0 9 chr13 74674862 74674968 -45609344 - MLT1C LTR MaLR -310 157 53 2 1154 800 264 60 0 chr13 74675201 74675402 -45608910 + B3 SINE B2 3 215 -1 2 1154 678 25 0 0 chr13 74675625 74675705 -45608607 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1154 1042 50 14 0 chr13 74675872 74676013 -45608299 + (TTC)n Simple_repeat Simple_repeat 3 145 0 2 1154 204 163 0 0 chr13 74676013 74676056 -45608256 + CT-rich Low_complexity Low_complexity 1 43 0 2 1154 216 273 18 0 chr13 74676073 74676128 -45608184 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1154 37017 63 2 14 chr13 74676519 74682667 -45601645 - L1Md_F2 LINE L1 -1 6581 511 2 1154 1956 152 23 9 chr13 74682671 74683016 -45601296 - Lx4B LINE L1 -1049 6009 5660 2 1154 427 176 9 56 chr13 74683016 74683030 -45601282 - ID_B1 SINE B4 -18 206 104 2 1154 733 32 0 0 chr13 74683030 74683124 -45601188 - B1_Mus2 SINE Alu -31 116 23 3 1154 1752 296 88 14 chr13 74683146 74683842 -45600470 + MTE-int LTR MaLR 783 1529 -51 2 1154 780 157 44 17 chr13 74683830 74684011 -45600301 - RMER17B LTR ERVK -590 368 183 3 1154 229 106 106 0 chr13 74684050 74684097 -45600215 + Lx9 LINE L1 7515 7566 -78 3 1154 812 191 35 6 chr13 74684115 74684289 -45600023 - RMER10A LTR ERVL 0 442 264 3 1154 541 236 132 26 chr13 74684301 74684588 -45599724 + RMER10B LTR ERVL 36 396 -2 3 1154 855 223 67 46 chr13 74684589 74684829 -45599483 - RMER10A LTR ERVL -197 245 1 3 1154 266 267 0 0 chr13 74686004 74686064 -45598248 + MMERGLN-int LTR ERV1 648 707 -6849 3 1154 3498 55 11 0 chr13 74686250 74686726 -45597586 - L1Md_F3 LINE L1 0 6584 6130 3 1154 986 52 0 0 chr13 74687121 74687257 -45597055 - B1_Mus1 SINE Alu 0 148 13 3 1154 345 100 0 0 chr13 74687363 74687413 -45596899 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1154 21 0 0 0 chr13 74687432 74687453 -45596859 + AT_rich Low_complexity Low_complexity 1 21 0 3 1154 204 40 0 0 chr13 74687617 74687642 -45596670 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1154 1041 115 0 0 chr13 74689020 74689168 -45595144 - B1_Mus1 SINE Alu 0 148 1 3 1154 1841 151 11 69 chr13 74689249 74689598 -45594714 - ORR1A4 LTR MaLR 0 329 1 3 1154 4604 153 116 81 chr13 74689598 74690739 -45593573 - ORR1A4-int LTR MaLR 0 1963 783 3 1154 293 277 60 0 chr13 74690686 74690769 -45593543 - B1_Mus2 SINE Alu -35 112 25 3 1154 504 160 10 29 chr13 74690785 74690888 -45593424 - MT2B LTR ERVL -348 253 153 3 1154 352 147 176 0 chr13 74690926 74690994 -45593318 - MERVL_2A-int LTR ERVL 0 5761 5682 3 1154 365 277 76 66 chr13 74691043 74691240 -45593072 - MurSatRep1 Unknown Unknown -88 2049 1851 3 1154 355 346 26 26 chr13 74691210 74691513 -45592799 - MurSatRep1 Unknown Unknown -88 2049 1747 3 1154 440 278 15 15 chr13 74691299 74691857 -45592455 - MMSAT4 Satellite Satellite 0 558 1 3 1154 307 372 11 5 chr13 74691714 74691898 -45592414 - MurSatRep1 Unknown Unknown -88 2049 1865 3 1154 8223 179 16 59 chr13 74691917 74692673 -45591639 - MurSatRep1 Unknown Unknown -43 2094 1345 3 1154 1210 118 43 0 chr13 74692673 74692860 -45591452 + B2_Mm2 SINE B2 1 195 0 3 1154 8223 179 16 59 chr13 74692860 74693845 -45590467 - MurSatRep1 Unknown Unknown -793 1344 428 3 1154 304 181 14 0 chr13 74693845 74693917 -45590395 + B2_Mm1t SINE B2 120 192 -1 3 1154 543 101 0 0 chr13 74693918 74693997 -45590315 + (GAAAA)n Simple_repeat Simple_repeat 3 81 0 3 1154 614 257 35 79 chr13 74693998 74694148 -45590164 + Lx4B LINE L1 6372 6522 -536 3 1154 1999 80 0 15 chr13 74694148 74694416 -45589896 - L1_Mus1 LINE L1 0 6567 6304 3 1154 614 257 35 79 chr13 74694416 74694493 -45589819 + Lx4B LINE L1 6523 6589 -469 3 1154 2194 282 90 42 chr13 74694503 74694977 -45589335 + Lx6 LINE L1 5781 6302 -1158 3 1154 992 103 14 14 chr13 74694977 74695124 -45589188 + B1_Mm SINE Alu 1 147 0 3 1154 2194 282 90 42 chr13 74695124 74695514 -45588798 + Lx6 LINE L1 6303 6687 -773 3 1154 878 292 5 8 chr13 74695516 74695764 -45588548 + Lx6 LINE L1 7060 7281 -179 3 1154 463 248 73 99 chr13 74695848 74695922 -45588390 - RMER10A LTR ERVL 0 442 388 3 1154 1575 47 11 0 chr13 74695922 74696112 -45588200 + B2_Mm1a SINE B2 2 193 0 3 1154 463 248 73 99 chr13 74696112 74696270 -45588042 - RMER10A LTR ERVL -55 387 216 3 1154 1140 187 42 31 chr13 74696258 74696517 -45587795 + RMER10B LTR ERVL 17 278 -120 3 1154 375 23 0 0 chr13 74696530 74696574 -45587738 + (CTAAT)n Simple_repeat Simple_repeat 4 47 0 3 1154 666 239 124 31 chr13 74696637 74696862 -45587450 - RMER10A LTR ERVL -196 246 1 3 1154 1159 102 96 0 chr13 74698762 74698906 -45585406 + B2_Mm2 SINE B2 2 153 -42 3 1154 527 66 13 0 chr13 74698906 74698982 -45585330 + (TA)n Simple_repeat Simple_repeat 1 77 0 3 1154 1159 102 96 0 chr13 74698982 74699014 -45585298 + B2_Mm2 SINE B2 154 194 -1 3 1154 1553 47 0 20 chr13 74699095 74699290 -45585022 + B2_Mm1a SINE B2 2 192 -1 3 1154 997 86 43 0 chr13 74699411 74699551 -45584761 + B1_Mus1 SINE Alu 3 148 0 3 1154 312 48 0 0 chr13 74699551 74699593 -45584719 + (A)n Simple_repeat Simple_repeat 1 42 0 3 1154 1957 228 27 22 chr13 74699882 74700371 -45583941 - Lx2B LINE L1 -19 6981 6491 3 1154 318 278 0 67 chr13 74702332 74702467 -45581845 - MT2A LTR ERVL -57 476 351 3 1154 208 147 29 87 chr13 74702758 74702862 -45581450 + (TTAGGG)n Simple_repeat Simple_repeat 3 100 0 3 1154 1752 157 7 3 chr13 74703022 74703328 -45580984 + L1_Mur1 LINE L1 4999 5305 -581 3 1154 740 104 9 0 chr13 74703328 74703443 -45580869 + B1_Mus1 SINE Alu 33 148 0 3 1154 1192 93 45 8 chr13 74703462 74703646 -45580666 - L1_Mur1 LINE L1 -409 5477 5259 3 1154 5532 59 30 3 chr13 74703646 74704355 -45579957 - L1Md_F2 LINE L1 -1 6581 5854 3 1154 438 209 53 107 chr13 74704355 74704422 -45579890 - L1_Mur1 LINE L1 -589 5258 5205 3 1154 180 0 0 0 chr13 74704495 74704515 -45579797 + (CACAG)n Simple_repeat Simple_repeat 5 24 0 3 1154 275 49 0 24 chr13 74705292 74705334 -45578978 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1154 453 302 37 0 chr13 74705641 74705856 -45578456 - L1_Mur3 LINE L1 -6646 1066 844 3 1154 3546 20 2 0 chr13 74705879 74706274 -45578038 - MTA_Mm LTR MaLR 0 396 1 3 1154 423 325 116 20 chr13 74706289 74706635 -45577677 - L1_Mur3 LINE L1 -7204 508 130 3 1154 532 342 81 47 chr13 74708335 74708694 -45575618 + MTD LTR MaLR 33 403 -16 3 1154 536 338 38 12 chr13 74708758 74709021 -45575291 + MTE-int LTR MaLR 44 346 -1234 3 1154 1386 178 31 8 chr13 74709022 74709282 -45575030 - Lx4B LINE L1 -144 6914 6649 3 1154 1501 163 27 63 chr13 74709282 74709616 -45574696 + RLTRETN_Mm LTR ERVK 1 322 0 3 1154 8151 110 10 59 chr13 74709617 74710657 -45573655 + MMETn-int LTR ERVK 2 969 -3875 3 144 3251 57 0 5 chr13 74710657 74711066 -45573246 + L1Md_F2 LINE L1 6164 6570 -12 3 1155 8151 110 10 59 chr13 74711066 74711397 -45572915 + MMETn-int LTR ERVK 970 1306 -3538 3 1155 3490 95 21 54 chr13 74711411 74712058 -45572254 + MMETn-int LTR ERVK 1654 2676 -4730 3 1155 1037 128 0 0 chr13 74713449 74713597 -45570715 - B1_Mus1 SINE Alu 0 148 1 3 1155 1823 158 11 69 chr13 74713679 74714027 -45570285 - ORR1A4 LTR MaLR -1 328 1 3 1155 4572 155 116 82 chr13 74714027 74715170 -45569142 - ORR1A4-int LTR MaLR 0 1963 783 3 1155 731 180 0 0 chr13 74715169 74715297 -45569015 - ORR1A3-int LTR MaLR -747 1216 1089 3 1155 538 168 9 27 chr13 74715324 74715434 -45568878 - MT2B LTR ERVL -342 259 152 3 1155 328 136 182 0 chr13 74715471 74715537 -45568775 - MERVL_2A-int LTR ERVL 0 5761 5684 3 1155 360 284 64 54 chr13 74715537 74715806 -45568506 - MurSatRep1 Unknown Unknown -88 2049 1747 3 1155 461 265 25 32 chr13 74715760 74716235 -45568077 - MMSAT4 Satellite Satellite 0 471 1 3 1155 567 303 53 29 chr13 74716178 74716646 -45567666 - MurSatRep1 Unknown Unknown 0 2137 1747 3 1155 383 290 15 15 chr13 74716600 74716906 -45567406 - MMSAT4 Satellite Satellite 0 306 1 3 1155 286 372 11 5 chr13 74716763 74716947 -45567365 - MurSatRep1 Unknown Unknown -88 2049 1865 3 1155 8959 184 14 50 chr13 74716966 74717720 -45566592 - MurSatRep1 Unknown Unknown -43 2094 1356 3 1155 1274 94 44 0 chr13 74717720 74717900 -45566412 + B2_Mm2 SINE B2 1 188 -7 3 1155 8959 184 14 50 chr13 74717900 74719023 -45565289 - MurSatRep1 Unknown Unknown -782 1355 284 3 1155 329 301 73 0 chr13 74719023 74719146 -45565166 + B1_Mur2 SINE Alu 1 132 -17 3 1155 867 124 0 40 chr13 74719149 74719300 -45565012 - MurSatRep1 Unknown Unknown -1988 149 5 3 1155 259 355 41 31 chr13 74719403 74719598 -45564714 + B3 SINE B2 2 198 -18 3 1155 1699 222 46 77 chr13 74720107 74720604 -45563708 + Lx4B LINE L1 6573 7054 -4 3 1155 1351 316 65 43 chr13 74720791 74721584 -45562728 - MTE-int LTR MaLR -51 1529 562 3 1155 2958 204 61 47 chr13 74721594 74722335 -45561977 + Lx4B LINE L1 5637 6387 -671 3 1155 1183 128 32 0 chr13 74722335 74722523 -45561789 + B2_Mm2 SINE B2 1 194 -1 3 1155 240 59 0 0 chr13 74722524 74722558 -45561754 + (GAAAA)n Simple_repeat Simple_repeat 3 36 0 3 1155 616 221 16 0 chr13 74722564 74722686 -45561626 + Lx4B LINE L1 6372 6495 -563 3 1155 1086 137 0 22 chr13 74722706 74722885 -45561427 - L1_Mus1 LINE L1 0 6567 6393 3 1155 394 204 19 0 chr13 74722885 74722988 -45561324 + B2_Mm1t SINE B2 88 192 -1 3 1155 502 270 54 77 chr13 74722988 74723156 -45561156 + Lx4B LINE L1 6369 6506 -552 3 1155 1777 115 4 23 chr13 74723156 74723422 -45560890 - L1_Mus1 LINE L1 -3 6564 6304 3 1155 502 263 53 83 chr13 74723422 74723496 -45560816 + Lx4B LINE L1 6507 6589 -469 3 1155 2264 289 78 38 chr13 74723506 74723987 -45560325 + Lx6 LINE L1 5781 6299 -1161 3 1155 1055 90 14 20 chr13 74723987 74724135 -45560177 + B1_Mm SINE Alu 1 147 0 3 1155 2264 289 78 38 chr13 74724135 74724522 -45559790 + Lx6 LINE L1 6300 6684 -776 3 1155 813 280 18 0 chr13 74724527 74724745 -45559567 + Lx6 LINE L1 7060 7281 -179 3 1155 657 212 44 11 chr13 74724862 74725043 -45559269 - RMER10A LTR ERVL -5 437 251 3 1155 849 195 106 41 chr13 74725058 74725304 -45559008 + RMER10B LTR ERVL 17 278 -120 3 1155 396 0 0 0 chr13 74725316 74725360 -45558952 + (CTAAT)n Simple_repeat Simple_repeat 4 47 0 3 1155 570 261 126 31 chr13 74725424 74725646 -45558666 - RMER10A LTR ERVL -196 246 4 3 1155 1120 129 0 67 chr13 74726492 74726700 -45557612 + B2_Mm2 SINE B2 2 195 0 3 1155 1067 79 7 0 chr13 74726894 74727033 -45557279 + B1_Mus1 SINE Alu 3 142 -6 3 1155 662 35 12 0 chr13 74727035 74727120 -45557192 + (GAAAA)n Simple_repeat Simple_repeat 5 90 0 3 1155 1870 232 24 26 chr13 74727413 74727905 -45556407 - Lx2B LINE L1 -19 6981 6491 3 1155 360 275 11 66 chr13 74729847 74730039 -45554273 - MT2A LTR ERVL -24 577 345 3 1155 229 137 29 87 chr13 74730286 74730390 -45553922 + (TTAGGG)n Simple_repeat Simple_repeat 3 100 0 3 1155 1665 148 13 7 chr13 74730550 74730855 -45553457 + L1_Mur2 LINE L1 4990 5296 -581 3 1155 726 104 9 0 chr13 74730855 74730970 -45553342 + B1_Mus1 SINE Alu 33 148 0 3 1155 1307 92 32 80 chr13 74730989 74731238 -45553074 - L1_Mur1 LINE L1 -409 5477 5241 3 1155 246 32 0 0 chr13 74731272 74731303 -45553009 + (CACAG)n Simple_repeat Simple_repeat 5 35 0 3 1155 356 262 141 15 chr13 74732414 74732612 -45551700 - L1_Mur3 LINE L1 -6646 1066 844 3 1155 372 346 44 18 chr13 74732668 74733054 -45551258 - L1_Mur3 LINE L1 -7245 467 72 3 1155 553 351 58 25 chr13 74734749 74735108 -45549204 + MTD LTR MaLR 33 403 -16 3 1155 505 329 41 17 chr13 74735172 74735435 -45548877 + MTE-int LTR MaLR 44 346 -1234 3 1155 6598 185 27 4 chr13 74735436 74736675 -45547637 - Lx4B LINE L1 -144 6914 5647 3 1155 733 32 0 0 chr13 74736676 74736770 -45547542 - B1_Mus2 SINE Alu -31 116 23 3 1155 1843 284 92 20 chr13 74736792 74737489 -45546823 + MTE-int LTR MaLR 783 1529 -51 3 1155 779 165 43 16 chr13 74737477 74737662 -45546650 - RMER17B LTR ERVK -590 368 179 3 1155 788 191 35 6 chr13 74737762 74737936 -45546376 - RMER10A LTR ERVL 0 442 264 3 1155 560 205 128 36 chr13 74737948 74738236 -45546076 + RMER10B LTR ERVL 36 396 -2 3 1155 860 215 71 46 chr13 74738237 74738476 -45545836 - RMER10A LTR ERVL -197 245 1 3 1155 266 267 0 0 chr13 74739649 74739709 -45544603 + MMERGLN-int LTR ERV1 648 707 -6849 4 1155 1017 37 0 0 chr13 74740255 74740391 -45543921 - B1_Mus1 SINE Alu 0 148 13 4 1155 198 167 0 0 chr13 74740497 74740533 -45543779 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 1155 21 0 0 0 chr13 74740552 74740573 -45543739 + AT_rich Low_complexity Low_complexity 1 21 0 4 1155 21 0 0 0 chr13 74740726 74740747 -45543565 + AT_rich Low_complexity Low_complexity 1 21 0 4 1155 1031 122 0 0 chr13 74742115 74742263 -45542049 - B1_Mus1 SINE Alu 0 148 1 4 1155 1545 153 89 74 chr13 74742344 74742668 -45541644 - ORR1A4 LTR MaLR 0 329 1 4 1155 4625 153 115 83 chr13 74742668 74743812 -45540500 - ORR1A4-int LTR MaLR 0 1963 783 4 1155 530 233 92 50 chr13 74743748 74743759 -45540553 - MT2B LTR ERVL -327 274 240 4 1155 304 209 75 0 chr13 74743759 74743826 -45540486 - B1_Mus2 SINE Alu -35 112 41 4 1155 530 233 92 50 chr13 74743826 74743840 -45540472 - MT2B LTR ERVL -362 239 195 4 1155 310 283 93 9 chr13 74743840 74743947 -45540365 - B1_Mur1 SINE Alu -31 118 3 4 1155 530 233 92 50 chr13 74743947 74744000 -45540312 - MT2B LTR ERVL -327 194 1 4 1155 305 141 188 0 chr13 74744001 74744065 -45540247 - MERVL_2A-int LTR ERVL -2 5759 5684 4 1155 407 318 42 38 chr13 74744065 74744586 -45539726 - MurSatRep1 Unknown Unknown -88 2049 1747 4 1155 507 265 18 18 chr13 74744372 74744763 -45539549 - MMSAT4 Satellite Satellite 0 391 1 4 1155 409 336 46 18 chr13 74744622 74744907 -45539405 - MurSatRep1 Unknown Unknown 0 2137 1845 4 1155 404 296 12 12 chr13 74744792 74745182 -45539130 - MMSAT4 Satellite Satellite 0 390 1 4 1155 332 361 11 5 chr13 74745039 74745223 -45539089 - MurSatRep1 Unknown Unknown -88 2049 1865 4 1155 3890 183 16 16 chr13 74745242 74745992 -45538320 - MurSatRep1 Unknown Unknown -43 2094 1345 4 1155 1173 114 45 0 chr13 74745998 74746174 -45538138 + B2_Mm2 SINE B2 5 188 -7 4 1155 2374 200 11 2 chr13 74746222 74746678 -45537634 - MurSatRep1 Unknown Unknown -780 1357 898 4 1155 1077 0 0 22 chr13 74746678 74746816 -45537496 + RLTRETN_Mm LTR ERVK 188 322 0 4 1155 5835 16 0 0 chr13 74746816 74747462 -45536850 + MMETn-int LTR ERVK 1 646 -4198 4 1155 198 0 0 0 chr13 74747462 74747484 -45536828 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1155 3206 159 34 23 chr13 74747484 74748101 -45536211 - MurSatRep1 Unknown Unknown -1230 907 284 4 1155 414 276 73 0 chr13 74748101 74748224 -45536088 + B1_Mur2 SINE Alu 1 132 -17 4 1155 864 131 0 40 chr13 74748227 74748378 -45535934 - MurSatRep1 Unknown Unknown -1988 149 5 4 1155 334 346 63 21 chr13 74748482 74748671 -45535641 + B3 SINE B2 2 198 -18 4 1155 203 86 0 79 chr13 74748982 74749020 -45535292 + A-rich Low_complexity Low_complexity 2 36 0 4 1155 1609 233 46 77 chr13 74749182 74749679 -45534633 + Lx4B LINE L1 6573 7054 -4 4 1155 1231 329 62 40 chr13 74749876 74750660 -45533652 - ORR1D-int LTR MaLR -7 1363 562 4 1155 2951 203 61 47 chr13 74750670 74751411 -45532901 + Lx4B LINE L1 5637 6387 -671 4 1155 1185 128 32 0 chr13 74751411 74751599 -45532713 + B2_Mm2 SINE B2 1 194 -1 4 1155 243 0 0 0 chr13 74751600 74751627 -45532685 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 4 1155 747 175 127 76 chr13 74751627 74751762 -45532550 + Lx4B LINE L1 6372 6483 -575 4 1155 333 0 0 0 chr13 74751762 74751799 -45532513 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 4 1155 1991 72 4 15 chr13 74751809 74752076 -45532236 - L1_Mus1 LINE L1 0 6567 6304 4 1155 747 152 138 87 chr13 74752076 74752143 -45532169 + Lx4B LINE L1 6490 6576 -482 4 1155 2296 278 85 26 chr13 74752139 74752643 -45531669 + Lx6 LINE L1 5758 6299 -1161 4 1155 1132 48 0 33 chr13 74752643 74752795 -45531517 + B1_Mm SINE Alu 1 147 0 4 1155 2296 290 84 29 chr13 74752795 74753173 -45531139 + Lx6 LINE L1 6300 6687 -773 4 1155 819 287 22 5 chr13 74753175 74753417 -45530895 + Lx6 LINE L1 7060 7281 -179 4 1155 575 225 54 16 chr13 74753509 74753694 -45530618 - RMER10A LTR ERVL 0 442 251 4 1155 1087 177 47 39 chr13 74753709 74753967 -45530345 + RMER10B LTR ERVL 17 276 -122 4 1155 330 26 0 0 chr13 74753983 74754022 -45530290 + (CTAAT)n Simple_repeat Simple_repeat 4 42 0 4 1155 243 154 0 0 chr13 74754026 74754065 -45530247 + RMER10B LTR ERVL 360 398 0 4 1155 312 332 101 52 chr13 74755794 74756162 -45528150 - MT2A LTR ERVL -57 476 91 4 1155 1227 98 16 32 chr13 74756651 74756841 -45527471 - B2_Mm2 SINE B2 -7 188 2 4 1155 429 305 39 20 chr13 74758013 74758217 -45526095 + RLTR42-int LTR ERVK 4032 4239 -1283 4 1155 3389 188 6 232 chr13 74758918 74759669 -45524643 + Lx3_Mus LINE L1 4750 5377 -500 4 1155 185 0 40 0 chr13 74759669 74759694 -45524618 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1155 7589 165 43 156 chr13 74759694 74760303 -45524009 + Lx3_Mus LINE L1 5378 5787 -1222 4 1155 1329 101 21 0 chr13 74760303 74760491 -45523821 + B2_Mm1a SINE B2 2 193 0 4 1155 7589 121 116 9 chr13 74760491 74761560 -45522752 + Lx3_Mus LINE L1 5788 7001 -8 4 1155 21 36 0 0 chr13 74761850 74761878 -45522434 + AT_rich Low_complexity Low_complexity 1 28 0 4 1155 1239 75 0 0 chr13 74761917 74762090 -45522222 - B2_Mm2 SINE B2 -22 173 1 4 1155 20010 60 4 2 chr13 74762100 74765309 -45519003 - L1Md_F2 LINE L1 -14 6568 3353 4 1155 1156 75 0 0 chr13 74766333 74766480 -45517832 + B1_Mus1 SINE Alu 1 147 -1 4 1155 197 98 24 0 chr13 74766497 74766538 -45517774 + (CAGAGA)n Simple_repeat Simple_repeat 3 44 0 4 1155 2032 57 0 115 chr13 74766853 74767193 -45517119 + MT2C_Mm LTR ERVL 6 306 -169 4 1155 229 116 0 0 chr13 74767220 74767263 -45517049 + MT2C_Mm LTR ERVL 286 328 -147 4 1155 567 276 47 0 chr13 74767898 74768025 -45516287 + ETnERV2-int LTR ERVK 7070 7202 -204 4 1155 1343 79 16 16 chr13 74769416 74769608 -45514704 - B2_Mm1t SINE B2 0 193 2 4 1155 2469 48 15 3 chr13 74770849 74771182 -45513130 + IAPEY_LTR LTR ERVK 47 383 -2 4 1155 621 135 6 61 chr13 74771408 74771589 -45512723 + (TTAGGG)n Simple_repeat Simple_repeat 5 175 0 4 1155 576 118 39 45 chr13 74771616 74771794 -45512518 + (TTAGGG)n Simple_repeat Simple_repeat 4 180 0 4 1155 858 72 24 0 chr13 74771794 74771919 -45512393 + MTA_Mm LTR MaLR 273 400 0 4 1155 7100 88 34 60 chr13 74771919 74773047 -45511265 + MTA_Mm-int LTR MaLR 1 1098 0 4 1155 3125 53 8 5 chr13 74773047 74773442 -45510870 + MTA_Mm LTR MaLR 1 396 0 4 1155 295 91 0 0 chr13 74773442 74773486 -45510826 + L1_Mur2 LINE L1 2354 2397 -3480 4 1155 4735 109 25 4 chr13 74773485 74774192 -45510120 + Lx2 LINE L1 5922 6643 -354 4 1155 1191 127 86 0 chr13 74774192 74774389 -45509923 + Lx2 LINE L1 6775 6988 -9 4 1155 206 40 57 57 chr13 74774430 74774483 -45509829 + (CAAA)n Simple_repeat Simple_repeat 3 55 0 4 1155 243 292 0 0 chr13 74774813 74774861 -45509451 + tRNA-Ala-GCY_ tRNA tRNA 14 61 -14 4 1155 554 225 0 24 chr13 74774915 74775038 -45509274 - B1_Mur2 SINE Alu -27 122 3 4 1155 895 136 13 39 chr13 74775063 74775216 -45509096 - B1_Mur4 SINE Alu 0 150 2 4 1155 462 264 0 0 chr13 74775240 74775331 -45508981 - B3 SINE B2 -125 91 1 4 1155 240 301 31 29 chr13 74775771 74775874 -45508438 + PB1D10 SINE Alu 5 108 -12 4 1155 1525 171 85 6 chr13 74775939 74776257 -45508055 + ORR1B1 LTR MaLR 1 343 -51 4 1155 646 210 38 6 chr13 74776465 74776623 -45507689 - B2_Mm2 SINE B2 -22 173 11 4 1155 574 200 87 22 chr13 74776629 74776767 -45507545 + B1_Mus1 SINE Alu 2 148 0 4 1155 281 100 20 0 chr13 74777830 74777880 -45506432 + (CCCCCT)n Simple_repeat Simple_repeat 5 55 0 4 1155 1585 27 32 0 chr13 74778226 74778413 -45505899 - B2_Mm1t SINE B2 0 193 1 4 1155 334 360 13 32 chr13 74778995 74779153 -45505159 - RLTR19 LTR ERVK -18 481 327 4 1155 224 375 107 35 chr13 74779648 74779938 -45504374 - L2c LINE L2 -20 3367 3057 4 1155 1162 74 0 0 chr13 74781178 74781326 -45502986 + B1_Mus1 SINE Alu 1 148 0 4 1155 503 266 38 23 chr13 74781681 74781812 -45502500 - B1F2 SINE Alu 0 149 17 4 1155 329 183 268 0 chr13 74782493 74782564 -45501748 + 5S rRNA rRNA 2 91 -30 4 1155 391 271 92 17 chr13 74783327 74783447 -45500865 + B1F2 SINE Alu 21 149 0 4 1155 527 284 97 38 chr13 74784425 74784765 -45499547 - MLT1C LTR MaLR 0 467 108 4 1155 912 278 89 67 chr13 74784830 74785338 -45498974 + RLTR18 LTR ERVK 1 616 0 4 1155 1154 202 0 32 chr13 74785617 74785837 -45498475 - B3 SINE B2 -2 214 2 4 1155 371 289 35 0 chr13 74785877 74785991 -45498321 - PB1D9 SINE Alu -1 119 2 4 1155 6197 142 72 44 chr13 74786526 74787759 -45496553 - Lx4A LINE L1 -3 7055 5746 4 1155 5293 63 5 1 chr13 74787761 74788428 -45495884 - L1_Mus1 LINE L1 -1 6566 5898 4 1155 11238 111 366 22 chr13 74788428 74791679 -45492633 - L1Md_F LINE L1 -845 5038 675 4 1155 2981 111 42 2 chr13 74791719 74792197 -45492115 - L1_Mur2 LINE L1 -90 5787 5291 4 1155 2358 183 64 22 chr13 74792197 74792695 -45491617 - RLTR11A LTR ERVK 0 528 10 4 1155 1833 131 32 15 chr13 74792704 74793044 -45491268 - L1_Mur2 LINE L1 -581 5296 4951 4 1155 4376 91 59 3 chr13 74793043 74793752 -45490560 + L1_Mur2 LINE L1 3768 4516 -1361 4 1155 1279 77 30 30 chr13 74793792 74793994 -45490318 - L1_Mus3 LINE L1 -5 6633 6432 4 1155 450 0 0 0 chr13 74793995 74794045 -45490267 + (TTTC)n Simple_repeat Simple_repeat 1 50 0 4 1155 326 186 176 37 chr13 74794050 74794190 -45490122 - B2_Mm2 SINE B2 -18 175 2 4 1155 1178 113 11 0 chr13 74794190 74794367 -45489945 - B2_Mm1t SINE B2 -14 179 1 4 1155 618 342 35 30 chr13 74794626 74794825 -45489487 - B4A SINE B4 -92 200 1 4 1155 405 215 183 0 chr13 74794847 74794940 -45489372 + B1_Mur2 SINE Alu 25 134 -15 4 1155 300 53 0 0 chr13 74794942 74794980 -45489332 + (CAAT)n Simple_repeat Simple_repeat 3 40 0 4 1155 1545 145 149 24 chr13 74795560 74795970 -45488342 + Lx9 LINE L1 7181 7641 -3 4 1155 519 169 31 10 chr13 74798140 74798236 -45486076 + B1_Mur2 SINE Alu 31 128 -21 4 1155 1113 94 0 27 chr13 74799035 74799220 -45485092 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 4 1155 253 333 9 9 chr13 74800404 74800513 -45483799 + PB1D10 SINE Alu 2 110 -7 4 1155 429 206 0 21 chr13 74800528 74800626 -45483686 + ID4 SINE ID 7 99 -53 4 1155 336 294 146 41 chr13 74801036 74801256 -45483056 - Lx8 LINE L1 0 7473 7231 4 1155 4027 164 55 4 chr13 74801705 74802487 -45481825 - Lx2B LINE L1 -80 6920 6099 4 1155 367 125 0 0 chr13 74802475 74802539 -45481773 - Lx2B LINE L1 -1033 5967 5904 4 1155 22 35 0 0 chr13 74803083 74803112 -45481200 + AT_rich Low_complexity Low_complexity 1 29 0 4 1155 219 320 164 0 chr13 74804605 74804727 -45479585 - MIR SINE MIR -71 191 50 4 1155 501 288 91 32 chr13 74806214 74806587 -45477725 - L1MC4 LINE L1 -259 7783 7389 4 1155 7401 45 9 0 chr13 74806969 74807877 -45476435 + L1Md_F2 LINE L1 5667 6582 0 5 1155 211 225 0 0 chr13 74807966 74808006 -45476306 + B4 SINE B4 2 41 -251 5 1155 428 324 5 86 chr13 74808049 74808235 -45476077 + B4 SINE B4 17 187 -105 5 1155 234 0 0 0 chr13 74808269 74808295 -45476017 + (CA)n Simple_repeat Simple_repeat 2 27 0 5 1155 336 98 0 0 chr13 74808339 74808400 -45475912 + Lx LINE L1 6592 6652 -2 5 1155 252 0 0 0 chr13 74809020 74809048 -45475264 + (ATTG)n Simple_repeat Simple_repeat 3 30 0 5 1155 362 391 73 9 chr13 74811511 74811743 -45472569 - LTR86A1 LTR ERVL -113 400 154 5 1155 735 230 0 7 chr13 74813543 74813692 -45470620 + B1_Mur1 SINE Alu 1 148 -1 5 1155 3558 135 19 92 chr13 74813849 74814222 -45470090 + L1VL2 LINE L1 326 685 -5650 5 1155 350 137 0 0 chr13 74814222 74814273 -45470039 - RLTR13D5 LTR ERVK -972 51 1 5 1155 3558 135 19 92 chr13 74814273 74814482 -45469830 + L1VL2 LINE L1 686 888 -5447 5 1155 180 0 0 0 chr13 74814482 74814502 -45469810 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 5 1155 25566 137 21 21 chr13 74814502 74816533 -45467779 + L1_Mus3 LINE L1 1203 3179 -2704 5 1155 1265 27 0 0 chr13 74816533 74816679 -45467633 + B1_Mm SINE Alu 1 146 -1 5 1155 25566 123 25 20 chr13 74816679 74820068 -45464244 + L1_Mus3 LINE L1 3180 6629 -9 5 1155 423 0 0 0 chr13 74820068 74820115 -45464197 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1155 38878 14 0 6 chr13 74821418 74827603 -45456709 - L1Md_A LINE L1 0 6582 440 5 1155 1989 148 25 6 chr13 74830376 74830696 -45453616 + ORR1A3 LTR MaLR 1 326 0 5 1155 1202 41 7 0 chr13 74830737 74830882 -45453430 - B1_Mus1 SINE Alu 0 148 3 5 1155 222 62 0 0 chr13 74832436 74832468 -45451844 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 5 1155 235 270 206 0 chr13 74832517 74832580 -45451732 - RSINE1 SINE B4 -19 146 71 5 1155 210 245 0 0 chr13 74832598 74832651 -45451661 + T-rich Low_complexity Low_complexity 2 54 0 5 1155 679 138 79 14 chr13 74832976 74833116 -45451196 - B1_Mur4 SINE Alu 0 150 2 5 1155 1579 164 53 51 chr13 74833658 74834004 -45450308 - RLTR22_Mur LTR ERVK 0 1848 1591 5 1155 5473 69 41 9 chr13 74834213 74834999 -45449313 - RLTR22_Mus LTR ERVK -997 811 1 5 1155 526 224 54 121 chr13 74835369 74835608 -45448704 + RMER17C LTR ERVK 156 378 -32 5 1155 886 252 125 34 chr13 74835609 74835712 -45448600 + MTD LTR MaLR 97 198 -221 5 1155 396 0 0 0 chr13 74835712 74835756 -45448556 + (CCA)n Simple_repeat Simple_repeat 1 44 0 5 1155 886 252 125 34 chr13 74835756 74835948 -45448364 + MTD LTR MaLR 199 418 -1 5 1155 369 0 0 0 chr13 74836067 74836108 -45448204 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1155 828 223 47 37 chr13 74836179 74836393 -45447919 - B3 SINE B2 0 216 1 5 1155 248 274 34 34 chr13 74837081 74837198 -45447114 + GA-rich Low_complexity Low_complexity 4 120 0 5 1155 252 261 55 126 chr13 74838322 74838449 -45445863 - B1F1 SINE Alu 0 120 3 5 1155 379 316 57 9 chr13 74840856 74841018 -45443294 - B4A SINE B4 -121 171 1 5 1155 303 28 0 0 chr13 74842022 74842058 -45442254 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1156 2766 58 0 10 chr13 74842661 74843046 -45441266 + L1Md_F2 LINE L1 6171 6551 -31 5 1156 33897 35 0 0 chr13 74843047 74848666 -45435646 + L1Md_T LINE L1 1 5589 -297 5 1156 8934 10 0 0 chr13 74848666 74849662 -45434650 + L1Md_T LINE L1 5590 6585 0 5 1156 323 163 0 32 chr13 74849665 74849760 -45434552 + A-rich Low_complexity Low_complexity 1 92 0 5 1156 342 0 0 0 chr13 74850278 74850316 -45433996 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1156 273 29 0 0 chr13 74850595 74850629 -45433683 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 5 1156 191 36 36 0 chr13 74850637 74850665 -45433647 + (GGGA)n Simple_repeat Simple_repeat 1 29 0 5 1156 562 302 37 12 chr13 74851414 74851578 -45432734 - B3A SINE B2 0 198 31 5 1156 11664 106 12 8 chr13 74851578 74854225 -45430087 + Lx2B LINE L1 425 3080 -2803 5 1156 565 164 19 9 chr13 74854226 74854331 -45429981 + ORR1A2-int LTR MaLR 1858 1963 0 5 1156 2065 129 3 30 chr13 74854331 74854659 -45429653 + ORR1A2 LTR MaLR 1 319 -8 5 1156 6969 137 75 8 chr13 74854663 74856815 -45427497 + Lx2B LINE L1 4712 6996 -4 5 1156 463 234 184 45 chr13 74856900 74857079 -45427233 - B3 SINE B2 -11 205 2 5 1156 507 200 99 10 chr13 74857087 74857188 -45427124 - PB1D9 SINE Alu -8 112 3 5 1156 308 305 40 54 chr13 74858037 74858186 -45426126 + B4A SINE B4 74 220 -72 5 1156 693 214 21 0 chr13 74858053 74858193 -45426119 + B1_Mus1 SINE Alu 6 148 0 5 1156 183 98 38 38 chr13 74858201 74858254 -45426058 + A-rich Low_complexity Low_complexity 2 54 0 5 1156 541 125 39 0 chr13 74858249 74858353 -45425959 + GA-rich Low_complexity Low_complexity 3 110 0 5 1156 1280 27 0 0 chr13 74859005 74859152 -45425160 + B1_Mm SINE Alu 1 147 0 5 1156 198 0 0 0 chr13 74859155 74859177 -45425135 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 5 1156 213 246 15 0 chr13 74859360 74859425 -45424887 + (TA)n Simple_repeat Simple_repeat 1 66 0 5 1156 2898 143 31 26 chr13 74859464 74859512 -45424800 - L1_Mur1 LINE L1 -2124 3762 3722 5 1156 186 43 0 0 chr13 74859512 74859535 -45424777 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1156 1106 96 0 0 chr13 74859535 74859681 -45424631 - B1_Mus1 SINE Alu -2 146 1 5 1156 2898 143 31 26 chr13 74859681 74860212 -45424100 - L1_Mur1 LINE L1 -2165 3721 3180 5 1156 1073 188 18 22 chr13 74860241 74860469 -45423843 + RMER16 LTR ERVK 307 533 0 5 1156 1133 300 56 32 chr13 74860485 74860987 -45423325 + Lx9 LINE L1 6953 7466 -178 5 1156 4928 46 2 0 chr13 74861017 74861602 -45422710 + LTRIS_Mus LTR ERV1 1 586 -1 5 1156 384 22 0 0 chr13 74861602 74861647 -45422665 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1156 207 0 0 0 chr13 74861959 74861982 -45422330 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1156 1045 70 0 21 chr13 74861994 74862139 -45422173 - B1_Mus1 SINE Alu 0 148 7 5 1156 23 54 0 0 chr13 74863053 74863090 -45421222 + AT_rich Low_complexity Low_complexity 1 37 0 5 1156 252 0 0 0 chr13 74865392 74865420 -45418892 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1156 225 0 0 0 chr13 74865935 74865960 -45418352 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1156 2183 108 32 0 chr13 74866455 74866770 -45417542 + ORR1A2 LTR MaLR 3 327 0 5 1156 240 333 36 27 chr13 74866813 74866924 -45417388 + MIRc SINE MIR 45 156 -112 5 1156 1439 273 82 29 chr13 74866944 74867434 -45416878 + Lx8 LINE L1 6811 7326 -147 5 1156 5037 49 5 33 chr13 74867435 74868107 -45416205 + L1Md_F3 LINE L1 5932 6584 0 5 1156 229 308 0 0 chr13 74868113 74868178 -45416134 + MIR SINE MIR 195 259 -3 5 1156 23 0 0 0 chr13 74868215 74868238 -45416074 + AT_rich Low_complexity Low_complexity 1 23 0 5 1156 507 294 49 0 chr13 74868893 74869036 -45415276 - RSINE1 SINE B4 -13 152 3 5 1156 401 299 43 7 chr13 74869073 74869211 -45415101 + ID_B1 SINE B4 81 223 -1 5 1156 216 0 0 0 chr13 74872181 74872205 -45412107 + (CTTTG)n Simple_repeat Simple_repeat 1 24 0 5 1156 320 293 117 39 chr13 74872250 74872353 -45411959 - PB1D10 SINE Alu 0 117 7 5 1156 268 339 14 97 chr13 74872308 74872452 -45411860 - ID_B1 SINE B4 -92 132 1 5 1156 1142 75 14 0 chr13 74872947 74873094 -45411218 + B1_Mur4 SINE Alu 1 149 -1 5 1156 328 192 20 0 chr13 74873934 74874033 -45410279 + GA-rich Low_complexity Low_complexity 2 102 0 5 1156 264 262 0 160 chr13 74874758 74874772 -45409540 - ID4_ SINE ID -59 93 5 5 1156 247 247 34 135 chr13 74874772 74874861 -45409451 - ID SINE ID -140 84 5 5 1156 233 261 227 0 chr13 74874873 74874961 -45409351 - PB1D10 SINE Alu -9 108 1 5 1156 791 278 60 81 chr13 74875149 74875532 -45408780 + MLT1B LTR MaLR 3 377 -13 5 1156 198 103 0 0 chr13 74876127 74876156 -45408156 + (TA)n Simple_repeat Simple_repeat 2 30 0 5 1156 1188 55 0 7 chr13 74876167 74876314 -45407998 - B1_Mus1 SINE Alu -2 146 1 5 1156 24 0 0 0 chr13 74876317 74876341 -45407971 + AT_rich Low_complexity Low_complexity 1 24 0 5 1156 1026 36 0 28 chr13 74878143 74878287 -45406025 + L1Md_F3 LINE L1 6431 6570 -14 5 1156 272 258 32 11 chr13 74879189 74879283 -45405029 + GA-rich Low_complexity Low_complexity 4 99 0 5 1156 222 289 119 60 chr13 74879854 74880005 -45404307 + MIR SINE MIR 40 199 -63 5 1156 289 280 21 11 chr13 74880154 74880248 -45404064 + CT-rich Low_complexity Low_complexity 1 95 0 5 1156 459 247 146 103 chr13 74882333 74882586 -45401726 - MER102a DNA MER1_type -8 322 59 5 1156 328 269 26 0 chr13 74882866 74882944 -45401368 + PB1 SINE Alu 9 88 -39 5 1156 474 88 0 0 chr13 74882949 74883017 -45401295 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 1156 541 217 0 9 chr13 74883788 74883895 -45400417 + B1_Mur3 SINE Alu 42 147 -2 5 1156 402 331 12 12 chr13 74885027 74885192 -45399120 + (TATG)n Simple_repeat Simple_repeat 1 165 0 5 1156 349 336 110 14 chr13 74885206 74885351 -45398961 - RSINE1 SINE B4 -2 163 5 5 1156 31 68 0 0 chr13 74885377 74885436 -45398876 + AT_rich Low_complexity Low_complexity 1 59 0 5 1156 188 297 176 0 chr13 74887475 74887566 -45396746 - MIR SINE MIR -128 134 28 5 1156 249 280 0 138 chr13 74888564 74888651 -45395661 + ID4_ SINE ID 5 79 -4 5 1156 5329 25 5 8 chr13 74888751 74889386 -45394926 + L1Md_F3 LINE L1 5940 6572 -12 5 1156 3921 99 37 29 chr13 74890346 74890967 -45393345 - Lx LINE L1 -2 6652 6027 5 1156 3859 95 11 1 chr13 74890969 74891740 -45392572 + Lx LINE L1 5229 6012 -642 5 1156 329 328 100 8 chr13 74892375 74892495 -45391817 + ORR1E LTR MaLR 5 135 -224 5 1156 1077 47 0 0 chr13 74892683 74892811 -45391501 - B1_Mm SINE Alu -19 128 1 5 1156 204 40 0 0 chr13 74893581 74893606 -45390706 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 5 1156 242 231 15 15 chr13 74893606 74893663 -45390649 + CT-rich Low_complexity Low_complexity 3 59 0 5 1156 1221 62 0 0 chr13 74893663 74893839 -45390473 + (TTC)n Simple_repeat Simple_repeat 3 178 0 5 1156 710 23 11 0 chr13 74893839 74893927 -45390385 + (TC)n Simple_repeat Simple_repeat 1 89 0 6 1156 180 0 0 0 chr13 74894023 74894043 -45390269 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 1156 1465 60 16 0 chr13 74894276 74894460 -45389852 + B2_Mm2 SINE B2 1 187 -8 6 1156 251 93 23 0 chr13 74894550 74894593 -45389719 + (CATA)n Simple_repeat Simple_repeat 2 45 0 6 1156 703 326 0 6 chr13 74894593 74894772 -45389540 - B3 SINE B2 -38 178 1 6 1156 24 53 0 0 chr13 74894780 74894818 -45389494 + AT_rich Low_complexity Low_complexity 1 38 0 6 1156 259 365 78 9 chr13 74895422 74895538 -45388774 - L2b LINE L2 -48 3327 3204 6 1156 3308 167 48 22 chr13 74897235 74897904 -45386408 - RMER6C LTR ERVK -4 686 1 6 1156 291 290 40 0 chr13 74898302 74898402 -45385910 + RCHARR1 DNA MER1_type 39 142 -832 6 1156 450 263 8 48 chr13 74898524 74898648 -45385664 + ORR1D2 LTR MaLR 168 286 -84 6 1156 573 246 16 23 chr13 74898651 74898780 -45385532 + ORR1D2 LTR MaLR 192 319 -51 6 1156 2854 222 82 35 chr13 74898815 74899595 -45384717 + RCHARR1 DNA MER1_type 158 974 0 6 1156 290 313 43 71 chr13 74899925 74900066 -45384246 - MIRb SINE MIR -36 232 96 6 1156 195 277 23 57 chr13 74900965 74901053 -45383259 + MIRm SINE MIR 50 134 -142 6 1156 1135 54 0 39 chr13 74901246 74901400 -45382912 - B1_Mus1 SINE Alu 0 148 1 6 1156 206 247 10 40 chr13 74901404 74901505 -45382807 + (TTA)n Simple_repeat Simple_repeat 2 99 0 6 1156 1089 209 48 0 chr13 74901513 74901723 -45382589 - MTC LTR MaLR -199 222 3 6 1156 227 56 56 0 chr13 74901765 74901801 -45382511 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 6 1156 349 236 63 24 chr13 74902760 74902886 -45381426 + L1MEd LINE L1 953 1083 -5036 6 1156 316 339 9 18 chr13 74903920 74904031 -45380281 - B1_Mm SINE Alu -5 142 33 6 1156 686 218 13 20 chr13 74904123 74904273 -45380039 - B1_Mur2 SINE Alu 0 149 1 6 1156 23 33 0 0 chr13 74904279 74904309 -45380003 + AT_rich Low_complexity Low_complexity 1 30 0 6 1156 336 198 143 86 chr13 74904318 74904423 -45379889 + B3A SINE B2 2 112 -86 6 1156 459 0 0 0 chr13 74904429 74904480 -45379832 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1156 282 87 0 0 chr13 74904480 74904526 -45379786 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1156 279 0 0 0 chr13 74904737 74904768 -45379544 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1156 347 353 0 0 chr13 74905552 74905719 -45378593 + (CCA)n Simple_repeat Simple_repeat 2 168 0 6 1156 3526 75 19 0 chr13 74906533 74906998 -45377314 + L1_Mus3 LINE L1 6158 6631 -7 6 1156 1208 86 0 0 chr13 74907092 74907255 -45377057 + L1_Mus1 LINE L1 6404 6566 -1 6 1156 295 226 32 0 chr13 74909175 74909262 -45375050 + MER5A1 DNA MER1_type 28 117 -49 6 1156 1171 49 0 7 chr13 74909262 74909407 -45374905 + B1_Mm SINE Alu 3 146 -1 6 1156 270 228 99 134 chr13 74909509 74909732 -45374580 - MER113A DNA MER1_type -64 250 36 6 1156 566 249 74 63 chr13 74909863 74910052 -45374260 + B3A SINE B2 8 198 0 6 1156 2304 105 9 0 chr13 74910311 74910635 -45373677 - ORR1A2 LTR MaLR 0 327 1 6 1156 1029 292 35 0 chr13 74911452 74911709 -45372603 + ORR1D2 LTR MaLR 105 370 0 6 1156 222 37 0 0 chr13 74912059 74912086 -45372226 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 6 1156 235 252 80 88 chr13 74913185 74913201 -45371111 + MIRc SINE MIR 42 51 -217 6 1156 1307 57 91 0 chr13 74913201 74913358 -45370954 + B2_Mm1a SINE B2 2 158 -35 6 1156 189 0 0 0 chr13 74913358 74913379 -45370933 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 6 1156 1307 57 91 0 chr13 74913379 74913397 -45370915 + B2_Mm1a SINE B2 159 191 -2 6 1156 264 274 96 58 chr13 74913397 74913557 -45370755 + MIRb SINE MIR 52 230 -38 6 1156 598 253 89 28 chr13 74913740 74913919 -45370393 + B3 SINE B2 13 202 -14 6 1156 3320 30 5 2 chr13 74913949 74914344 -45369968 + MTA_Mm LTR MaLR 1 396 0 6 1156 3038 64 26 0 chr13 74914349 74914739 -45369573 + MTB LTR MaLR 1 400 0 6 1156 3358 115 8 4 chr13 74914739 74915254 -45369058 + MTB-int LTR MaLR 1 517 -581 6 1156 7970 16 0 0 chr13 74915254 74916209 -45368103 + L1Md_A LINE L1 4632 5586 -297 6 1156 8427 34 0 0 chr13 74916209 74917205 -45367107 + L1Md_A LINE L1 5587 6582 0 6 1156 617 37 0 0 chr13 74917207 74917256 -45367056 + MTB-int LTR MaLR 1008 1056 -42 6 1156 2572 107 39 8 chr13 74917256 74917642 -45366670 + MTB LTR MaLR 3 400 0 6 1156 1229 28 0 0 chr13 74918540 74918681 -45365631 - B1_Mm SINE Alu -6 141 1 6 1156 257 262 83 0 chr13 74918915 74918999 -45365313 - MIR SINE MIR -105 157 67 6 1156 215 333 0 0 chr13 74919221 74919269 -45365043 - ID SINE ID -172 52 5 6 1156 3710 147 32 3 chr13 74920317 74920946 -45363366 + RMER12 LTR ERVK 4 650 -672 6 1156 3170 62 66 5 chr13 74920948 74921372 -45362940 - L1_Mus1 LINE L1 0 6567 6118 6 1156 8052 33 0 2 chr13 74921382 74922469 -45361843 - L1Md_F3 LINE L1 -14 6570 5486 6 1156 556 60 36 0 chr13 74922469 74922552 -45361760 + RMER12 LTR ERVK 627 712 -610 6 1156 1013 193 97 67 chr13 74922554 74923043 -45361269 + L1_Mur1 LINE L1 14 507 -6475 6 1156 3297 76 12 4 chr13 74923035 74923525 -45360787 + Lx3A LINE L1 4392 4885 -1001 6 1156 1375 119 41 5 chr13 74923525 74923744 -45360568 + ORR1A2-int LTR MaLR 1737 1963 0 6 1156 1915 124 4 0 chr13 74923744 74924019 -45360293 + ORR1A2 LTR MaLR 1 276 -51 6 1156 6597 68 33 8 chr13 74924024 74925035 -45359277 + Lx3A LINE L1 4883 5920 -1089 6 1156 555 153 0 0 chr13 74925048 74925146 -45359166 + GA-rich Low_complexity Low_complexity 2 99 0 6 1156 2050 111 0 88 chr13 74925146 74925553 -45358759 + Lx3A LINE L1 5923 6293 -716 6 1156 789 65 232 0 chr13 74925553 74925691 -45358621 - RLTR40 LTR ERVK -535 282 113 6 1156 346 154 0 25 chr13 74925691 74925771 -45358541 + (CAG)n Simple_repeat Simple_repeat 1 78 0 6 1156 577 114 65 28 chr13 74925772 74925880 -45358432 - RLTR40 LTR ERVK -692 125 14 6 1156 256 30 0 0 chr13 74925880 74925913 -45358399 + RLTR40 LTR ERVK 245 277 -540 6 1156 4740 82 47 20 chr13 74925913 74926581 -45357731 + Lx3A LINE L1 6280 6969 -12 6 1156 180 0 0 0 chr13 74926581 74926601 -45357711 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 6 1156 4740 82 47 20 chr13 74926601 74926616 -45357696 + Lx3A LINE L1 6970 6981 0 6 1156 362 207 22 44 chr13 74926617 74926708 -45357604 + RMER12 LTR ERVK 701 789 -533 6 1156 333 0 0 0 chr13 74926709 74926746 -45357566 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1156 342 222 69 142 chr13 74926746 74926864 -45357448 + RMER12 LTR ERVK 993 1082 -240 6 1156 487 229 82 33 chr13 74926892 74927014 -45357298 + RMER12 LTR ERVK 1195 1322 0 6 1156 361 277 190 11 chr13 74927185 74927364 -45356948 + L1MEc LINE L1 973 1183 -5217 6 1156 3201 157 97 63 chr13 74927588 74928308 -45356004 + RLTR40 LTR ERVK 1 734 -83 6 1156 423 0 0 0 chr13 74928308 74928355 -45355957 + (TTTTC)n Simple_repeat Simple_repeat 2 48 0 6 1156 3201 157 97 63 chr13 74928355 74928409 -45355903 + RLTR40 LTR ERVK 735 800 -17 6 1156 705 106 0 0 chr13 74929467 74929571 -45354741 + (TCC)n Simple_repeat Simple_repeat 3 106 0 6 1156 258 116 0 0 chr13 74929854 74929897 -45354415 + (CATA)n Simple_repeat Simple_repeat 2 44 0 6 1156 1220 256 69 47 chr13 74929915 74930404 -45353908 + MT2B LTR ERVL 13 601 0 6 1156 852 305 13 88 chr13 74930407 74930457 -45353855 - Lx9 LINE L1 -142 7502 7459 6 1156 489 104 0 0 chr13 74930457 74930534 -45353778 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 1156 852 305 13 88 chr13 74930534 74930734 -45353578 - Lx9 LINE L1 -186 7458 7269 6 1156 1410 240 95 3 chr13 74930734 74931114 -45353198 - MTD LTR MaLR 0 419 5 6 1156 852 305 13 88 chr13 74931114 74931387 -45352925 - Lx9 LINE L1 -376 7268 7017 6 1156 337 286 14 0 chr13 74932089 74932159 -45352153 + ID4_ SINE ID 6 76 -7 6 1156 1503 53 11 0 chr13 74932268 74932458 -45351854 + B2_Mm1t SINE B2 1 192 -1 6 1156 290 291 0 0 chr13 74932913 74932968 -45351344 + B4 SINE B4 236 290 -2 6 1156 1752 134 88 3 chr13 74933346 74933652 -45350660 + IAPEY3_LTR LTR ERVK 1 332 0 6 1156 28 0 0 0 chr13 74933733 74933761 -45350551 + AT_rich Low_complexity Low_complexity 1 28 0 6 1156 758 320 67 3 chr13 74933900 74934182 -45350130 + MER2 DNA MER2_type 26 325 -20 6 1156 489 305 16 121 chr13 74935092 74935119 -45349193 + B4A SINE B4 3 29 -263 6 1156 1620 243 32 35 chr13 74935119 74935626 -45348686 + RLTR16 LTR ERVK 1 505 0 6 1156 489 305 16 121 chr13 74935626 74935788 -45348524 + B4A SINE B4 30 172 -120 6 1156 34 42 0 0 chr13 74935989 74936037 -45348275 + AT_rich Low_complexity Low_complexity 1 48 0 6 1156 30 27 0 0 chr13 74936167 74936204 -45348108 + AT_rich Low_complexity Low_complexity 1 37 0 6 1156 633 251 63 23 chr13 74936822 74936997 -45347315 - B3 SINE B2 -19 197 16 6 1156 968 210 48 10 chr13 74937286 74937493 -45346819 + B3 SINE B2 2 216 0 6 1156 6725 94 10 16 chr13 74938194 74939215 -45345097 - Lx LINE L1 -1 6653 5639 6 1156 818 182 170 10 chr13 74939616 74939810 -45344502 + URR1B DNA MER1_type 1 225 0 6 1156 369 0 0 0 chr13 74939845 74939886 -45344426 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1156 519 257 21 28 chr13 74941071 74941215 -45343097 + RSINE1 SINE B4 4 146 -19 6 1156 243 0 0 0 chr13 74941233 74941260 -45343052 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1156 189 0 0 0 chr13 74942582 74942603 -45341709 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 6 1156 292 233 56 0 chr13 74942657 74942747 -45341565 - MER2 DNA MER2_type -165 180 86 6 1156 374 157 12 0 chr13 74942895 74942978 -45341334 + (TA)n Simple_repeat Simple_repeat 2 85 0 6 1156 261 0 0 0 chr13 74943125 74943154 -45341158 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 6 1156 443 266 80 56 chr13 74943206 74943493 -45340819 + MER33 DNA MER1_type 22 315 -9 6 1156 2204 98 6 18 chr13 74943845 74944186 -45340126 + Lx2 LINE L1 6659 6995 -2 6 1156 211 164 54 18 chr13 74947398 74947454 -45336858 + (CATATA)n Simple_repeat Simple_repeat 2 59 0 6 1156 3174 29 11 0 chr13 74948198 74948580 -45335732 + RLTR10 LTR ERVK 1 386 -4 6 1156 7922 20 1 0 chr13 74948596 74949543 -45334769 + RLTR10-int LTR ERVK 41 988 -999 6 1156 8424 17 0 0 chr13 74949620 74950615 -45333697 + RLTR10-int LTR ERVK 990 1984 -3 6 1156 3174 29 11 0 chr13 74950617 74950999 -45333313 + RLTR10 LTR ERVK 1 386 -4 6 1156 185 100 50 0 chr13 74951358 74951398 -45332914 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 6 1156 1120 70 0 0 chr13 74951400 74951542 -45332770 - B1_Mus2 SINE Alu -5 142 1 6 1156 512 100 0 12 chr13 74951741 74951822 -45332490 + (GGA)n Simple_repeat Simple_repeat 3 82 0 6 1156 193 318 21 68 chr13 74954405 74954538 -45329774 - MIR SINE MIR -87 181 50 6 1156 306 299 149 0 chr13 74957975 74958062 -45326250 + B1_Mur2 SINE Alu 24 123 -26 6 1156 378 357 77 64 chr13 74958164 74958490 -45325822 + Charlie9 DNA MER1_type 2311 2640 -117 6 1156 333 0 0 0 chr13 74959040 74959077 -45325235 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 6 1156 26 30 0 0 chr13 74959210 74959243 -45325069 + AT_rich Low_complexity Low_complexity 1 33 0 6 1156 222 318 121 0 chr13 74959445 74959511 -45324801 + ID4 SINE ID 9 82 -1 7 1156 30 0 0 0 chr13 74959512 74959542 -45324770 + AT_rich Low_complexity Low_complexity 1 30 0 7 1156 258 215 32 11 chr13 74959963 74960057 -45324255 + GA-rich Low_complexity Low_complexity 1 96 0 7 1156 333 208 0 0 chr13 74960090 74960167 -45324145 + (TA)n Simple_repeat Simple_repeat 1 77 0 7 1156 204 243 14 14 chr13 74960187 74960258 -45324054 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 7 1156 992 246 0 27 chr13 74960294 74960515 -45323797 - B3 SINE B2 -1 215 1 7 1156 708 98 0 0 chr13 74960661 74960763 -45323549 + (TTTC)n Simple_repeat Simple_repeat 3 104 0 7 1156 230 61 0 0 chr13 74960770 74960803 -45323509 - IAPLTR1a_Mm LTR ERVK -304 33 1 7 1156 1161 118 0 0 chr13 74960803 74960981 -45323331 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 7 1156 736 168 11 17 chr13 74960985 74961161 -45323151 + CT-rich Low_complexity Low_complexity 3 177 0 7 1156 6889 133 51 2 chr13 74961179 74962365 -45321947 - Lx3B LINE L1 -3 6970 5727 7 1156 846 76 0 22 chr13 74962367 74962502 -45321810 - L1_Mur1 LINE L1 -588 5298 5167 7 1156 452 125 469 15 chr13 74963605 74963735 -45320577 - B2_Mm2 SINE B2 -2 193 5 7 1156 333 298 21 11 chr13 74963877 74963972 -45320340 - PB1D10 SINE Alu -20 97 2 7 1156 333 259 0 43 chr13 74963974 74964091 -45320221 - L1MC3 LINE L1 -95 7690 7579 7 1156 1521 201 125 51 chr13 74964098 74964570 -45319742 + RLTR11A LTR ERVK 4 510 -18 7 1156 326 319 199 0 chr13 74964601 74964937 -45319375 - L1MD3 LINE L1 -219 7776 7374 7 1156 3746 186 8 12 chr13 74965279 74966415 -45317897 + Lx4B LINE L1 864 1998 -3888 7 1156 13508 145 85 43 chr13 74966425 74968237 -45316075 + Lx4B LINE L1 2865 4725 -1152 7 1156 204 40 0 0 chr13 74968237 74968262 -45316050 + (TAA)n Simple_repeat Simple_repeat 3 27 0 7 1156 13508 155 74 34 chr13 74968262 74969703 -45314609 + Lx4B LINE L1 4726 6268 -790 7 1156 1641 208 39 23 chr13 74970223 74970607 -45313705 + RLTR16 LTR ERVK 104 493 -12 7 1156 269 169 69 14 chr13 74970604 74970676 -45313636 + RLTR16 LTR ERVK 430 505 0 7 1156 513 268 30 45 chr13 74970770 74971036 -45313276 + L1M4 LINE L1 4352 4613 -1533 7 1156 349 266 127 23 chr13 74971068 74971241 -45313071 + L1M4 LINE L1 4705 4895 -1251 7 1156 289 330 128 0 chr13 74971303 74971635 -45312677 + L1M4 LINE L1 5486 5869 -315 7 1156 205 270 153 20 chr13 74972384 74972541 -45311771 - MIRb SINE MIR -60 208 18 7 144 211 335 57 99 chr13 74972957 74973239 -45311073 - L2c LINE L2 -187 3200 2931 7 1157 34080 42 1 3 chr13 74973358 74978677 -45305635 + L1Md_T LINE L1 188 5589 -297 7 1157 8445 34 0 0 chr13 74978678 74979673 -45304639 + L1Md_T LINE L1 5591 6585 0 7 1157 195 42 0 0 chr13 74979690 74979714 -45304598 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1157 742 357 83 13 chr13 74979845 74980220 -45304092 - LTR16B1 LTR ERVL 0 480 80 7 1157 1222 54 0 0 chr13 74980553 74980700 -45303612 - B1_Mm SINE Alu 0 147 1 7 1157 1461 164 94 26 chr13 74980958 74981265 -45303047 - RMER1A Other Other -3 1027 700 7 1157 826 223 0 0 chr13 74981367 74981515 -45302797 - B1_Mur4 SINE Alu -1 149 2 7 1157 189 0 0 0 chr13 74982308 74982329 -45301983 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 7 1157 683 24 0 12 chr13 74982547 74982633 -45301679 + (TTCC)n Simple_repeat Simple_repeat 4 88 0 7 1157 993 221 111 65 chr13 74982723 74983091 -45301221 + RLTR31_Mur LTR ERVK 1 385 -168 7 1157 1271 223 183 54 chr13 74983206 74983704 -45300608 + RMER2 LTR ERV1 2 563 -4 7 1157 433 285 61 74 chr13 74983981 74984129 -45300183 + ID_B1 SINE B4 79 224 0 7 1157 8162 57 12 2 chr13 74984986 74986761 -45297551 - L1Md_F2 LINE L1 0 6582 4788 7 1157 1216 61 0 0 chr13 74987524 74987672 -45296640 - B1_Mus1 SINE Alu 0 148 1 7 1157 2187 91 19 0 chr13 74988831 74989150 -45295162 + IAPEY2_LTR LTR ERVK 33 357 0 7 1157 360 0 0 0 chr13 74989185 74989225 -45295087 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1157 1170 68 0 7 chr13 74989831 74989979 -45294333 + B1_Mus1 SINE Alu 2 148 0 7 1157 952 156 0 11 chr13 74989991 74990173 -45294139 + GA-rich Low_complexity Low_complexity 1 180 0 7 1157 1160 111 0 6 chr13 74990176 74990357 -45293955 + (GAA)n Simple_repeat Simple_repeat 1 180 0 7 1157 217 287 0 33 chr13 74992028 74992118 -45292194 + CT-rich Low_complexity Low_complexity 2 88 0 7 1157 363 174 128 0 chr13 74992140 74992249 -45292063 - Lx9 LINE L1 -5 7639 7517 7 1157 362 57 19 0 chr13 74992252 74992305 -45292007 + (TG)n Simple_repeat Simple_repeat 2 55 0 7 1157 339 198 28 65 chr13 74992305 74992413 -45291899 - Lx9 LINE L1 -168 7476 7373 7 1157 1255 108 5 20 chr13 74992480 74992678 -45291634 - B2_Mm2 SINE B2 0 195 1 7 1157 612 206 73 22 chr13 74992678 74992857 -45291455 - Lx9 LINE L1 -261 7383 7196 7 1157 243 319 75 21 chr13 74993124 74993217 -45291095 + MER5A1 DNA MER1_type 63 160 -6 7 1157 746 269 56 17 chr13 74993657 74994013 -45290299 + L1M5 LINE L1 4458 4827 -1319 7 1157 309 345 12 78 chr13 74994196 74994451 -45289861 + Lx8 LINE L1 7236 7473 0 7 1157 2350 142 76 5 chr13 74995522 74995941 -45288371 - Lx2 LINE L1 -2 6995 6547 7 1157 21 0 0 0 chr13 74995976 74995997 -45288315 + AT_rich Low_complexity Low_complexity 1 21 0 7 1157 438 20 0 0 chr13 74996312 74996363 -45287949 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1157 291 208 38 25 chr13 74997186 74997265 -45287047 - RNERVK23-int LTR ERVK -7948 269 190 7 1157 404 219 93 27 chr13 74997443 74997593 -45286719 - RLTR43A LTR ERVK -4 360 201 7 1157 247 383 31 15 chr13 74997896 74998026 -45286286 - MamRep605 Unknown Unknown -527 349 218 7 1157 181 292 116 66 chr13 74998642 74998763 -45285549 + L2a LINE L2 3033 3159 -267 7 1157 256 83 42 0 chr13 74999507 74999555 -45284757 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1157 232 378 50 44 chr13 75001457 75001637 -45282675 + AmnSINE1 SINE SINE 154 334 -241 1 1157 301 51 0 0 chr13 75002096 75002135 -45282177 + B1_Mm SINE Alu 100 138 -9 2 1157 276 30 0 0 chr13 75002147 75002180 -45282132 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1157 347 353 0 0 chr13 75002447 75002614 -45281698 + (TGG)n Simple_repeat Simple_repeat 2 168 0 4 1157 751 294 85 30 chr13 75003430 75003760 -45280552 + MLT1B LTR MaLR 11 358 -32 5 1157 423 0 0 0 chr13 75003837 75003884 -45280428 + (TATG)n Simple_repeat Simple_repeat 2 48 0 6 1157 1125 178 27 5 chr13 75004559 75004779 -45279533 + URR1A DNA MER1_type 1 225 -1 7 1157 2333 118 0 18 chr13 75006194 75006584 -45277728 + L1_Mm LINE L1 4242 4624 -1259 8 1157 670 280 122 17 chr13 75006630 75006924 -45277388 - MLT1A0 LTR MaLR -4 463 30 9 1157 280 296 142 8 chr13 75006925 75007098 -45277214 - MER45B DNA Tip100 -839 201 2 1 1157 1122 127 12 0 chr13 75007163 75007336 -45276976 + B2_Mm1t SINE B2 2 176 -17 1 1157 7283 128 27 15 chr13 75007341 75009188 -45275124 - L1VL4 LINE L1 -1506 2053 183 1 1157 474 279 107 13 chr13 75009224 75009373 -45274939 - MER5A1 DNA MER1_type -1 165 3 1 1157 1634 179 124 3 chr13 75009430 75009778 -45274534 - ORR1B1 LTR MaLR -2 392 3 1 1157 1036 98 91 12 chr13 75010582 75010747 -45273565 + B2_Mm2 SINE B2 4 181 -14 1 1157 401 242 96 27 chr13 75011772 75011959 -45272353 - RLTR15 LTR ERVK -9 350 151 1 1157 2404 120 27 0 chr13 75011976 75012352 -45271960 - Lx4A LINE L1 -188 5689 5304 1 1157 3161 151 68 16 chr13 75012350 75012984 -45271328 + Lx4A LINE L1 5684 6350 -708 1 1157 2020 265 86 25 chr13 75012985 75013663 -45270649 - Lx7 LINE L1 -345 7351 6633 1 1157 236 329 49 25 chr13 75013669 75013750 -45270562 + MIRb SINE MIR 5 87 -181 1 1157 189 331 58 58 chr13 75014480 75014634 -45269678 + MIRb SINE MIR 80 233 -35 1 1157 27 29 0 0 chr13 75014665 75014699 -45269613 + AT_rich Low_complexity Low_complexity 1 34 0 2 1157 333 0 0 0 chr13 75014904 75014941 -45269371 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1157 34537 66 2 15 chr13 75015019 75021196 -45263116 - L1Md_F2 LINE L1 0 6582 489 2 1157 234 0 0 0 chr13 75021237 75021263 -45263049 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2 1157 216 0 0 0 chr13 75021275 75021299 -45263013 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 1157 492 18 0 0 chr13 75021299 75021355 -45262957 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1157 6441 30 1 11 chr13 75021355 75022161 -45262151 - L1Md_F2 LINE L1 -23 6559 5762 2 1157 12231 89 4 26 chr13 75022152 75024728 -45259584 - L1Md_A LINE L1 -2934 2949 433 2 1157 547 265 31 57 chr13 75025746 75025938 -45258374 + RLTR23 LTR ERV1 244 430 0 2 1157 209 114 29 0 chr13 75026196 75026231 -45258081 + (GAAA)n Simple_repeat Simple_repeat 1 36 0 2 1157 3254 185 12 7 chr13 75026579 75027151 -45257161 - RMER15 LTR ERVL 0 575 1 3 1157 195 42 0 0 chr13 75027608 75027632 -45256680 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1157 843 324 27 3 chr13 75027657 75027954 -45256358 + Lx8 LINE L1 6377 6680 -793 3 1157 257 323 28 121 chr13 75028020 75028161 -45256151 - RMER21B LTR ERV1 -68 879 752 3 1157 1571 189 159 71 chr13 75028192 75028369 -45255943 - RLTR28 LTR ERVL -66 458 276 3 1157 1064 103 7 0 chr13 75028369 75028515 -45255797 + B1_Mm SINE Alu 1 147 0 3 1157 1571 189 159 71 chr13 75028515 75028758 -45255554 - RLTR28 LTR ERVL -249 275 1 3 1157 413 260 276 0 chr13 75028766 75028958 -45255354 - RMER21B LTR ERV1 -275 567 323 3 1157 533 266 92 23 chr13 75029091 75029264 -45255048 + Lx8 LINE L1 7070 7254 -219 3 1157 23 33 0 0 chr13 75029457 75029487 -45254825 + AT_rich Low_complexity Low_complexity 1 30 0 3 1157 3528 118 118 34 chr13 75029696 75030383 -45253929 + L1VL1 LINE L1 193 918 -5523 3 1157 15392 100 5 1 chr13 75030380 75033474 -45250838 + L1_Mus3 LINE L1 3533 6636 -2 3 1157 450 0 0 0 chr13 75034069 75034119 -45250193 + (TTATA)n Simple_repeat Simple_repeat 1 50 0 3 1157 188 111 28 0 chr13 75034539 75034575 -45249737 + (CATA)n Simple_repeat Simple_repeat 2 38 0 4 1157 206 156 0 22 chr13 75034576 75034622 -45249690 + GA-rich Low_complexity Low_complexity 2 46 0 4 1157 464 337 90 33 chr13 75034640 75034852 -45249460 - B4 SINE B4 -68 224 1 4 1157 272 333 125 16 chr13 75034865 75034993 -45249319 - L2a LINE L2 -16 3410 3269 4 1157 2237 207 14 39 chr13 75035074 75035632 -45248680 - L1_Rod LINE L1 -3359 2488 1945 4 1157 1034 183 114 0 chr13 75035641 75035843 -45248469 - URR1A DNA MER1_type 0 226 2 4 1157 1579 205 35 24 chr13 75035861 75036472 -45247840 - L1_Rod LINE L1 -4217 1630 1017 4 1157 3288 157 20 7 chr13 75036472 75036934 -45247378 + RLTR20B1 LTR ERVK 1 470 -93 4 1157 360 0 0 0 chr13 75036934 75036974 -45247338 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1157 3288 157 20 7 chr13 75036974 75037052 -45247260 + RLTR20B1 LTR ERVK 471 547 -16 4 1157 848 263 42 10 chr13 75037063 75037370 -45246942 - L1_Rod LINE L1 -6584 1024 708 4 1157 981 194 44 4 chr13 75037554 75037802 -45246510 - RLTR18-int LTR ERVK -206 5155 4898 4 1157 1189 56 0 0 chr13 75038009 75038151 -45246161 + B1_Mus2 SINE Alu 1 142 -5 4 1157 217 338 13 13 chr13 75038496 75038571 -45245741 - MIRb SINE MIR -186 82 8 5 1157 1658 21 5 0 chr13 75041659 75041851 -45242461 + B2_Mm1t SINE B2 1 193 0 5 1157 9978 122 26 14 chr13 75042137 75043765 -45240547 - L1_Mus4 LINE L1 -7 6629 5003 5 1157 1149 61 0 13 chr13 75043765 75043914 -45240398 - B1_Mus1 SINE Alu 0 148 2 5 1157 9978 149 27 32 chr13 75043914 75044932 -45239380 - L1_Mus4 LINE L1 -881 5002 3969 5 1157 218 313 11 67 chr13 75044990 75045039 -45239273 - B4 SINE B4 -207 85 41 5 1157 2765 93 36 3 chr13 75045039 75045426 -45238886 + MTB LTR MaLR 1 400 0 5 1157 218 313 11 67 chr13 75045426 75045465 -45238847 - B4 SINE B4 -252 40 2 5 1157 1273 75 0 22 chr13 75045760 75045938 -45238374 - L1_Mus1 LINE L1 0 6567 6394 5 1157 1117 97 24 0 chr13 75045938 75046103 -45238209 + L1_Mm LINE L1 5516 5684 -199 5 1157 1395 217 53 0 chr13 75046140 75046458 -45237854 - Lx5 LINE L1 -42 7008 6674 5 1157 450 351 51 38 chr13 75047671 75047985 -45236327 - L1MC LINE L1 -2190 5692 5375 5 1157 349 320 30 0 chr13 75047998 75048098 -45236214 + PB1D7 SINE Alu 10 112 -8 6 1157 22 35 0 0 chr13 75048327 75048356 -45235956 + AT_rich Low_complexity Low_complexity 1 29 0 6 1157 22 0 0 0 chr13 75048997 75049019 -45235293 + AT_rich Low_complexity Low_complexity 1 22 0 6 1157 451 200 50 0 chr13 75049104 75049184 -45235128 + URR1A DNA MER1_type 2 85 -141 6 1157 531 264 97 93 chr13 75049207 75049635 -45234677 - RMER2 LTR ERV1 -27 540 5 6 1157 383 252 70 47 chr13 75049624 75049644 -45234668 - CYRA11_Mm Unknown Y-chromosome -279 338 228 6 1157 838 148 14 0 chr13 75049644 75049786 -45234526 + URR1A DNA MER1_type 82 225 -1 6 1157 222 128 0 0 chr13 75050065 75050104 -45234208 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1157 1382 248 72 68 chr13 75050304 75050746 -45233566 - RLTR41 LTR ERV1 0 446 3 6 1157 342 0 0 0 chr13 75050965 75051003 -45233309 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1157 204 163 0 0 chr13 75051095 75051138 -45233174 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1157 504 0 0 0 chr13 75051146 75051202 -45233110 + (GA)n Simple_repeat Simple_repeat 2 57 0 7 1157 573 140 333 95 chr13 75051250 75051460 -45232852 + RLTR41 LTR ERV1 1 260 -186 7 1157 2171 150 16 86 chr13 75051630 75052083 -45232229 + RMER16 LTR ERVK 113 533 0 7 1157 851 68 279 7 chr13 75052179 75052326 -45231986 - B2_Mm2 SINE B2 -6 189 3 7 1157 2511 193 62 69 chr13 75052678 75053436 -45230876 - Lx7 LINE L1 0 7696 6944 7 1157 183 392 25 0 chr13 75053572 75053651 -45230661 + L2 LINE L2 2361 2441 -978 7 1157 6123 26 0 0 chr13 75054294 75054997 -45229315 - L1Md_F3 LINE L1 -14 6570 5868 7 1157 404 310 32 49 chr13 75056064 75056257 -45228055 + MIR SINE MIR 13 197 -71 7 1157 1070 102 0 20 chr13 75057098 75057248 -45227064 - B1_Mus1 SINE Alu 0 148 2 7 1157 216 0 0 0 chr13 75057581 75057605 -45226707 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1157 259 265 34 57 chr13 75058190 75058278 -45226034 - AmnSINE1 SINE SINE -401 174 89 8 1157 22 0 0 0 chr13 75058413 75058435 -45225877 + AT_rich Low_complexity Low_complexity 1 22 0 8 1157 2270 191 25 5 chr13 75059185 75059590 -45224722 + MTC LTR MaLR 1 413 -8 8 1157 3406 212 52 73 chr13 75059738 75060305 -45224007 - RLTR13C1 LTR ERVK 0 983 424 8 1157 921 56 0 0 chr13 75060305 75060431 -45223881 - L1Md_T LINE L1 0 6582 6457 8 1157 3406 212 52 73 chr13 75060431 75060867 -45223445 - RLTR13C1 LTR ERVK -560 423 1 8 1157 976 261 157 6 chr13 75061126 75061450 -45222862 - MTD LTR MaLR 0 419 47 8 1157 597 249 83 39 chr13 75062041 75062434 -45221878 - Lx7 LINE L1 -1 7695 7254 8 1157 259 309 29 0 chr13 75063204 75063272 -45221040 + MIR SINE MIR 81 150 -112 8 1157 368 330 27 54 chr13 75063331 75063517 -45220795 - B3A SINE B2 -16 182 2 8 1157 1356 262 58 99 chr13 75063544 75064149 -45220163 - Lx8 LINE L1 -32 7441 6862 8 1157 213 333 51 13 chr13 75064793 75064872 -45219440 - B3A SINE B2 -104 94 13 9 1157 1605 32 5 0 chr13 75065049 75065239 -45219073 - B2_Mm1t SINE B2 -1 192 2 9 1157 1088 272 116 27 chr13 75065848 75066252 -45218060 - RMER20A LTR ERVK 0 516 77 9 1157 753 39 0 0 chr13 75066295 75066398 -45217914 + L1_Mus1 LINE L1 6463 6565 -2 9 1157 12309 149 60 13 chr13 75066760 75069143 -45215169 + L1_Mur2 LINE L1 2087 4581 -1296 9 1157 1055 84 0 7 chr13 75069144 75069287 -45215025 + RLTR22_Mus LTR ERVK 1 142 -1666 9 1157 1349 318 41 42 chr13 75070040 75071018 -45213294 + MMTV-int LTR ERVK 1869 3813 -3440 9 1157 4109 72 37 9 chr13 75071195 75071757 -45212555 - L1Md_F2 LINE L1 -3 6579 6002 9 1157 491 327 36 52 chr13 75074455 75074820 -45209492 + ETnERV3-int LTR ERVK 5137 5495 -313 9 1157 2265 88 3 0 chr13 75075028 75075347 -45208965 + RLTR22_Mur LTR ERVK 502 821 -1027 9 1157 252 254 0 0 chr13 75075614 75075669 -45208643 + RLTR22_Mus LTR ERVK 1543 1597 -211 1 1157 23792 128 25 5 chr13 75075669 75079540 -45204772 + L1_Mm LINE L1 1713 5660 -223 1 1157 3835 66 2 0 chr13 75079533 75080033 -45204279 + L1Md_F2 LINE L1 5086 5586 -297 1 1157 7569 64 4 16 chr13 75080033 75081039 -45203273 + L1Md_F2 LINE L1 5587 6580 -2 1 1157 534 116 0 34 chr13 75081092 75081181 -45203131 + RMER16-int LTR ERVK 123 208 -5198 1 1157 342 0 0 0 chr13 75081181 75081219 -45203093 + (TAA)n Simple_repeat Simple_repeat 1 38 0 1 1157 14172 108 51 10 chr13 75081225 75083452 -45200860 + RMER16-int LTR ERVK 1809 4125 -1281 1 1157 5773 80 15 8 chr13 75083456 75084275 -45200037 + RMER16-int LTR ERVK 4262 5085 -321 1 1157 4682 20 0 1 chr13 75084276 75084971 -45199341 - L1Md_A LINE L1 -543 6039 5346 1 1157 4551 34 2 0 chr13 75084971 75085508 -45198804 + L1Md_T LINE L1 6044 6581 -1 1 1157 2396 103 6 3 chr13 75085668 75085999 -45198313 + RMER16-int LTR ERVK 5075 5406 0 1 1157 2323 102 4 35 chr13 75085999 75086372 -45197940 + RMER16 LTR ERVK 1 448 -85 1 1157 183 80 0 0 chr13 75086372 75086397 -45197915 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1157 256 307 179 26 chr13 75086398 75086475 -45197837 + RLTR20B3 LTR ERVK 387 482 -95 1 1157 189 0 0 0 chr13 75086475 75086496 -45197816 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1157 256 307 179 26 chr13 75086496 75086535 -45197777 + RLTR20B3 LTR ERVK 483 521 -56 1 1157 6098 147 68 5 chr13 75086572 75087761 -45196551 + Lx4B LINE L1 4798 6142 -858 1 1157 2026 207 201 9 chr13 75087805 75088334 -45195978 + Lx4B LINE L1 6407 7039 -19 1 1157 633 27 0 0 chr13 75088334 75088409 -45195903 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1157 2026 207 201 9 chr13 75088409 75088426 -45195886 + Lx4B LINE L1 7040 7057 -1 1 1157 396 0 0 0 chr13 75088543 75088587 -45195725 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1157 474 318 76 38 chr13 75088591 75088748 -45195564 - RSINE1 SINE B4 0 165 3 1 1157 325 92 0 84 chr13 75089389 75089460 -45194852 - L1Md_F2 LINE L1 0 6582 6518 1 1157 396 42 0 0 chr13 75089775 75089823 -45194489 - HAL1-3A_ME LINE L1 -835 2023 1976 1 1157 222 207 0 0 chr13 75089823 75089881 -45194431 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1157 498 311 84 31 chr13 75089885 75090336 -45193976 - Lx8 LINE L1 -20 7453 6951 1 1157 1398 176 23 19 chr13 75090347 75090608 -45193704 - ORR1B2 LTR MaLR -105 262 1 1 1157 624 134 92 72 chr13 75092069 75092222 -45192090 - RMER1C Other Other 0 1342 1187 1 1157 1990 112 0 40 chr13 75092327 75092652 -45191660 - L1Md_F2 LINE L1 -1 6581 6270 1 1157 720 262 112 91 chr13 75092755 75093040 -45191272 - B4 SINE B4 0 292 2 1 1157 183 304 57 65 chr13 75093328 75093451 -45190861 - L2a LINE L2 0 3426 3305 1 1157 576 0 0 0 chr13 75094330 75094401 -45189911 + L1Md_T LINE L1 6512 6582 0 1 1157 1719 138 77 41 chr13 75094487 75094827 -45189485 - Lx LINE L1 0 6654 6303 1 1157 909 93 0 0 chr13 75095359 75095488 -45188824 + (TTCC)n Simple_repeat Simple_repeat 3 131 0 1 1157 241 60 59 20 chr13 75096688 75096739 -45187573 + (CAAAA)n Simple_repeat Simple_repeat 1 53 0 1 1157 4711 162 21 55 chr13 75096777 75097514 -45186798 + L1_Mus3 LINE L1 413 1146 -5488 1 1157 1971 131 10 19 chr13 75097514 75097826 -45186486 - RLTR27 LTR ERVK 0 309 1 1 1157 26743 138 13 28 chr13 75097826 75101069 -45183243 + L1_Mus3 LINE L1 1147 4287 -1596 1 1157 369 0 0 0 chr13 75101069 75101110 -45183202 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1 1157 26743 138 13 27 chr13 75101110 75102059 -45182253 + L1_Mus3 LINE L1 4288 5242 -641 1 1157 265 24 48 0 chr13 75102059 75102101 -45182211 + (TA)n Simple_repeat Simple_repeat 1 44 0 1 1157 26743 111 16 8 chr13 75102101 75103476 -45180836 + L1_Mus3 LINE L1 5243 6631 -7 1 1157 214 106 21 21 chr13 75104024 75104072 -45180240 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1 144 7569 76 21 5 chr13 75104136 75105143 -45179169 - RLTR13D5 LTR ERVK 0 1023 1 1 1158 30 69 0 0 chr13 75106007 75106065 -45178247 + AT_rich Low_complexity Low_complexity 1 58 0 1 1158 216 67 0 0 chr13 75107441 75107471 -45176841 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1158 453 19 0 0 chr13 75107545 75107599 -45176713 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1158 28 0 0 0 chr13 75108210 75108238 -45176074 + AT_rich Low_complexity Low_complexity 1 28 0 1 1158 1153 276 96 28 chr13 75108350 75108809 -45175503 - Lx9 LINE L1 -153 7491 7002 1 1158 942 268 12 12 chr13 75108806 75109059 -45175253 - Lx9 LINE L1 -1670 5974 5722 1 1158 231 190 55 91 chr13 75109079 75109189 -45175123 + Lx9 LINE L1 7386 7491 -153 1 1158 754 239 33 74 chr13 75109222 75109472 -45174840 - Lx9 LINE L1 -1752 5721 5449 1 1158 2884 248 58 103 chr13 75109474 75109600 -45174712 + L1_Rod LINE L1 3929 4053 -1794 1 1158 1005 90 14 0 chr13 75109600 75109745 -45174567 + B1_Mm SINE Alu 1 147 0 1 1158 2884 248 58 103 chr13 75109745 75111021 -45173291 + L1_Rod LINE L1 4054 5268 -579 1 1158 1555 179 81 0 chr13 75111025 75111332 -45172980 - Lx9 LINE L1 -127 7517 7186 1 1158 494 165 0 0 chr13 75111673 75111758 -45172554 - Lx9 LINE L1 -280 7364 7280 1 1158 834 173 42 59 chr13 75111759 75111998 -45172314 + Lx9 LINE L1 7409 7643 -1 1 1158 281 256 0 24 chr13 75112007 75112091 -45172221 + L1_Rod LINE L1 5304 5385 -462 1 1158 593 137 52 9 chr13 75112396 75112611 -45171701 + (TAGA)n Simple_repeat Simple_repeat 1 224 0 1 1158 30 54 0 39 chr13 75112664 75112741 -45171571 + AT_rich Low_complexity Low_complexity 1 74 0 1 1158 1345 140 8 57 chr13 75113280 75113545 -45170767 - L1_Mus3 LINE L1 -6 6632 6381 1 1158 15756 146 20 60 chr13 75113545 75115067 -45169245 - L1_Mm LINE L1 -73 5810 4270 1 1158 513 0 0 0 chr13 75115067 75115124 -45169188 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 1 1158 1026 87 0 0 chr13 75115124 75115262 -45169050 - B1_Mm SINE Alu 0 147 10 1 1158 15756 146 20 60 chr13 75115262 75116705 -45167607 - L1_Mm LINE L1 -1614 4269 2833 1 1158 4485 95 43 14 chr13 75116710 75117428 -45166884 - RMER17A LTR ERVK -12 739 1 1 1158 9790 113 10 6 chr13 75117428 75118998 -45165314 - MusHAL1 LINE L1 -1095 1617 41 1 1158 4736 106 4 1 chr13 75118998 75119678 -45164634 + L1_Mus3 LINE L1 5955 6636 -2 1 1158 7302 99 54 11 chr13 75119754 75120893 -45163419 + Lx3C LINE L1 5783 6969 -7 1 1158 244 238 48 48 chr13 75120906 75120990 -45163322 + L1_Mur3 LINE L1 4619 4702 -1178 1 1158 628 235 0 0 chr13 75121111 75121230 -45163082 + MT2A LTR ERVL 3 121 -412 1 1158 406 205 24 12 chr13 75121237 75121321 -45162991 + MT2A LTR ERVL 94 178 -355 1 1158 469 248 52 3 chr13 75121320 75121433 -45162879 + MT2A LTR ERVL 341 523 -61 1 1158 494 225 233 0 chr13 75121433 75121580 -45162732 - ORR1D1 LTR MaLR 0 374 200 1 1158 635 85 0 0 chr13 75123114 75123196 -45161116 - L1_Mus1 LINE L1 -110 6457 6376 1 1158 518 109 32 48 chr13 75123196 75123321 -45160991 + L1Md_F2 LINE L1 6458 6580 -2 1 1158 8952 113 12 22 chr13 75124851 75127139 -45157173 + L1_Mus3 LINE L1 4399 6638 0 1 1158 6972 122 17 9 chr13 75127409 75127425 -45156887 - Lx LINE L1 0 6654 6640 1 1158 228 35 0 0 chr13 75127425 75127454 -45156858 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 1 1158 6972 123 16 9 chr13 75127454 75128560 -45155752 - Lx LINE L1 -15 6639 5522 1 1158 186 43 0 0 chr13 75128677 75128700 -45155612 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1158 28 48 0 0 chr13 75129112 75129154 -45155158 + AT_rich Low_complexity Low_complexity 1 42 0 1 1158 216 0 0 0 chr13 75129457 75129481 -45154831 + (CCA)n Simple_repeat Simple_repeat 2 25 0 1 1158 232 91 45 0 chr13 75129855 75129899 -45154413 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1158 459 85 24 12 chr13 75132675 75132758 -45151554 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 1 1158 214 304 0 0 chr13 75132758 75132804 -45151508 - ID SINE ID -150 74 29 1 1158 240 273 0 0 chr13 75132964 75133019 -45151293 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1158 192 357 29 39 chr13 75134087 75134189 -45150123 + L2c LINE L2 3024 3124 -263 1 1158 3680 43 45 0 chr13 75134582 75135045 -45149267 + L1Md_F2 LINE L1 6098 6581 -1 1 1158 407 90 0 29 chr13 75135045 75135114 -45149198 + L1_Mur1 LINE L1 4527 4593 -1293 1 1158 606 51 0 0 chr13 75135241 75135319 -45148993 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 1158 378 0 0 0 chr13 75135319 75135360 -45148952 + (GA)n Simple_repeat Simple_repeat 2 43 0 1 1158 263 350 98 29 chr13 75135596 75135870 -45148442 - MLT-int LTR MaLR -1442 293 1 1 1158 770 61 0 0 chr13 75135879 75135978 -45148334 - B1_Mm SINE Alu -2 145 47 1 1158 327 277 12 24 chr13 75135917 75136002 -45148310 - RLTR25B LTR ERVK -521 507 424 1 1158 230 248 110 89 chr13 75136205 75136351 -45147961 + YREP_Mm Unknown Unknown 146 294 -1518 1 1158 963 86 2 0 chr13 75136226 75136368 -45147944 - B1_Mus1 SINE Alu 0 148 6 1 1158 1091 83 14 0 chr13 75136428 75136572 -45147740 - B1_Mm SINE Alu 0 147 2 1 1158 570 200 33 16 chr13 75137172 75137294 -45147018 - ORR1D2 LTR MaLR -246 124 1 1 1158 278 190 106 71 chr13 75137294 75137375 -45146937 - B1F1 SINE Alu -55 94 11 1 1158 1575 151 68 38 chr13 75138330 75138532 -45145780 - RMER17C LTR ERVK -34 376 181 1 1158 518 0 0 16 chr13 75138532 75138595 -45145717 + (GAGAA)n Simple_repeat Simple_repeat 5 66 0 1 1158 1575 151 68 38 chr13 75138595 75138757 -45145555 - RMER17C LTR ERVK -230 180 1 1 1158 1856 157 251 12 chr13 75138757 75139327 -45144985 - RMER17C-int LTR ERVK 0 3238 2533 1 1158 718 161 41 88 chr13 75139347 75139420 -45144892 - RMER17C-int LTR ERVK -907 2331 2266 1 1158 3800 42 0 0 chr13 75139420 75139877 -45144435 + L1Md_A LINE L1 6126 6582 0 1 1158 718 161 41 88 chr13 75139877 75139973 -45144339 - RMER17C-int LTR ERVK -973 2265 2170 1 1158 878 190 227 24 chr13 75139987 75140407 -45143905 - RMER17C-int LTR ERVK -1248 1990 1485 1 1158 885 173 62 23 chr13 75141161 75141338 -45142974 - RMER17C-int LTR ERVK -3054 184 1 1 1158 1596 163 67 25 chr13 75141338 75141774 -45142538 - RMER17C LTR ERVK -519 439 16 1 1158 248 319 140 9 chr13 75141981 75142095 -45142217 - LTR81A LTR ERV1? -58 1292 1164 1 1158 1748 62 0 4 chr13 75142485 75142712 -45141600 + L1_Mus1 LINE L1 6341 6566 -1 1 1158 433 324 88 0 chr13 75143257 75143439 -45140873 + Lx9 LINE L1 7267 7464 -180 1 1158 369 0 0 0 chr13 75143452 75143493 -45140819 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1158 3585 168 41 33 chr13 75143512 75144262 -45140050 - L1_Mur3 LINE L1 -1162 4718 3963 1 1158 251 286 148 21 chr13 75145321 75145510 -45138802 - Charlie20a DNA Charlie -162 645 433 1 1158 279 0 0 0 chr13 75145511 75145542 -45138770 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1158 804 93 6 178 chr13 75145674 75145843 -45138469 + B1_Mus1 SINE Alu 3 142 -6 1 1158 1632 221 65 15 chr13 75146116 75146515 -45137797 - MTD LTR MaLR 0 419 1 1 1158 805 288 4 52 chr13 75146782 75147013 -45137299 + B4A SINE B4 2 221 -71 1 1158 407 118 0 13 chr13 75147091 75147168 -45137144 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 1158 513 94 0 0 chr13 75147173 75147258 -45137054 + (TC)n Simple_repeat Simple_repeat 2 86 0 1 1158 1448 213 40 115 chr13 75147354 75147521 -45136791 - RMER10A LTR ERVL 0 442 260 1 1158 654 13 0 0 chr13 75147521 75147596 -45136716 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1158 1448 213 40 115 chr13 75147596 75147906 -45136406 - RMER10A LTR ERVL -183 259 2 1 1158 233 304 25 12 chr13 75148352 75148432 -45135880 + LTR86A2 LTR ERVL 325 405 -103 1 1158 776 297 71 7 chr13 75148664 75148972 -45135340 + L1MC4a LINE L1 6249 6576 -1306 1 1158 355 19 39 0 chr13 75148987 75149039 -45135273 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2 1158 240 111 0 0 chr13 75149040 75149076 -45135236 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1158 786 58 0 0 chr13 75149078 75149182 -45135130 + (GA)n Simple_repeat Simple_repeat 1 104 0 2 1158 27 0 0 0 chr13 75149557 75149584 -45134728 + AT_rich Low_complexity Low_complexity 1 27 0 2 1158 639 302 14 33 chr13 75149658 75149870 -45134442 + B3 SINE B2 9 216 0 2 1158 235 287 38 38 chr13 75150200 75150305 -45134007 + L1M5 LINE L1 4554 4658 -1488 2 1158 504 292 0 7 chr13 75150945 75151083 -45133229 + Lx9 LINE L1 6581 6717 -927 2 1158 381 161 58 145 chr13 75151083 75151221 -45133091 + MT2B LTR ERVL 139 264 -337 2 1158 991 82 0 0 chr13 75151122 75151256 -45133056 + B1_Mus2 SINE Alu 14 147 0 2 1158 468 295 130 55 chr13 75151275 75151650 -45132662 + Lx9 LINE L1 6738 7140 -504 2 1158 24310 119 14 11 chr13 75151681 75153196 -45131116 - L1_Mus4 LINE L1 0 6636 5055 2 1158 3034 66 9 36 chr13 75153196 75153637 -45130675 - L1Md_F2 LINE L1 -2 6580 6152 2 1158 24310 161 28 29 chr13 75153637 75158222 -45126090 - L1_Mus4 LINE L1 -829 5054 541 2 1158 432 267 125 5 chr13 75158293 75158485 -45125827 + Lx9 LINE L1 7278 7492 -152 2 1158 25 31 0 0 chr13 75158591 75158623 -45125689 + AT_rich Low_complexity Low_complexity 1 32 0 2 1158 702 245 147 65 chr13 75158626 75158771 -45125541 + Lx3_Mus LINE L1 11 209 -6775 2 1158 546 57 0 0 chr13 75158771 75158841 -45125471 + (TTCC)n Simple_repeat Simple_repeat 1 70 0 2 1158 6388 119 89 10 chr13 75158841 75160423 -45123889 + Lx3_Mus LINE L1 210 2200 -3686 2 1158 1387 84 0 0 chr13 75160407 75160598 -45123714 - L1_Mus2 LINE L1 -740 5826 5636 2 1158 9839 94 31 39 chr13 75160594 75162103 -45122209 + Lx3_Mus LINE L1 4439 5922 -1087 2 1158 255 79 0 0 chr13 75162103 75162141 -45122171 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 2 1158 9839 90 26 14 chr13 75162141 75163043 -45121269 + Lx3_Mus LINE L1 5923 6825 -184 2 1158 2105 174 67 32 chr13 75163043 75163477 -45120835 + RLTR44B LTR ERVK 1 449 0 2 1158 9839 90 26 14 chr13 75163477 75163644 -45120668 + Lx3_Mus LINE L1 6826 7009 0 2 1158 609 83 0 0 chr13 75163798 75163882 -45120430 + (GAAA)n Simple_repeat Simple_repeat 3 86 0 2 1158 257 276 11 22 chr13 75163887 75163976 -45120336 + L1M2 LINE L1 4992 5079 -1064 2 1158 3378 33 2 0 chr13 75164033 75164427 -45119885 + MTA_Mm LTR MaLR 1 395 -1 2 1158 951 196 66 14 chr13 75164908 75165120 -45119192 - URR1B DNA MER1_type -1 224 2 2 1158 204 118 0 29 chr13 75165259 75165294 -45119018 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 2 1158 569 231 90 23 chr13 75165301 75165434 -45118878 + B1_Mur1 SINE Alu 8 149 0 2 1158 1046 240 115 16 chr13 75165535 75165840 -45118472 + MTD LTR MaLR 1 335 -84 2 1158 4380 139 84 22 chr13 75166448 75166890 -45117422 - RMER17A2 LTR ERVK 0 906 448 2 1158 453 19 0 0 chr13 75166890 75166944 -45117368 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 1158 4475 139 84 22 chr13 75166944 75167354 -45116958 - RMER17A2 LTR ERVK -459 447 2 2 1158 398 239 45 0 chr13 75167579 75167667 -45116645 - B3 SINE B2 -123 93 2 2 1158 235 346 82 8 chr13 75167693 75167827 -45116485 - MIR SINE MIR -10 252 109 2 1158 2449 155 23 2 chr13 75167961 75168355 -45115957 + RLTR20C LTR ERVK 2 403 -131 2 1158 642 335 23 28 chr13 75168807 75169022 -45115290 - ID_B1 SINE B4 -5 219 6 2 1158 24 0 0 0 chr13 75169157 75169181 -45115131 + AT_rich Low_complexity Low_complexity 1 24 0 2 1158 260 299 66 0 chr13 75169383 75169520 -45114792 + L1MB5 LINE L1 5585 5730 -448 2 1158 828 263 36 14 chr13 75169598 75169818 -45114494 - MTE2b LTR MaLR 0 379 155 2 1158 1167 266 28 75 chr13 75169841 75170304 -45114008 - RLTR20B3 LTR ERVK -3 524 127 2 1158 377 232 84 0 chr13 75170318 75170426 -45113886 - MTE2b LTR MaLR -258 121 6 2 1158 335 267 0 0 chr13 75170445 75170535 -45113777 + L1MB5 LINE L1 5838 5927 -247 2 1158 2327 115 16 43 chr13 75172317 75172690 -45111622 - RLTR8 LTR ERVK 0 365 3 2 1158 503 254 72 26 chr13 75172836 75173030 -45111282 + L1VL1 LINE L1 294 496 -5926 2 1158 26084 183 51 19 chr13 75173053 75173731 -45110581 + L1_Mus2 LINE L1 559 1256 -4627 2 1158 549 64 0 0 chr13 75173731 75173809 -45110503 + (GAAA)n Simple_repeat Simple_repeat 4 81 0 2 1158 26084 104 48 8 chr13 75173809 75178899 -45105413 + L1_Mus2 LINE L1 1257 6566 0 2 1158 392 239 14 55 chr13 75178931 75179077 -45105235 + Lx7 LINE L1 7277 7416 -280 2 1158 242 242 68 61 chr13 75179143 75179275 -45105037 + Lx7 LINE L1 7547 7679 -17 2 1158 251 239 15 15 chr13 75179275 75179343 -45104969 + (TATATG)n Simple_repeat Simple_repeat 1 68 0 2 1158 247 295 0 13 chr13 75179715 75179794 -45104518 + Lx8 LINE L1 6236 6313 -1160 2 1158 1175 314 66 15 chr13 75179824 75180354 -45103958 + Lx8 LINE L1 6910 7466 -7 2 1158 22 35 0 0 chr13 75180356 75180385 -45103927 + AT_rich Low_complexity Low_complexity 1 29 0 2 1158 387 0 0 0 chr13 75181330 75181373 -45102939 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1158 423 0 0 0 chr13 75181617 75181664 -45102648 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1158 378 107 0 0 chr13 75181793 75181849 -45102463 + (ATG)n Simple_repeat Simple_repeat 2 57 0 2 1158 396 246 15 76 chr13 75182248 75182380 -45101932 - L2 LINE L2 -556 2863 2740 2 1158 7536 53 11 1 chr13 75184544 75185530 -45098782 - L1Md_F2 LINE L1 0 6582 5587 2 1158 24348 63 3 0 chr13 75185547 75188838 -45095474 + L1Md_F2 LINE L1 2266 5567 -316 2 1158 414 252 255 21 chr13 75189612 75189941 -45094371 - MER113 DNA MER1_type -66 455 50 2 1158 263 349 81 17 chr13 75190109 75190281 -45094031 + MIRb SINE MIR 25 207 -61 2 1158 248 294 0 0 chr13 75191953 75192021 -45092291 + Lx8 LINE L1 6640 6707 -766 2 1158 348 340 57 29 chr13 75192020 75192265 -45092047 + Lx8 LINE L1 7194 7445 -28 2 1158 3560 220 48 39 chr13 75192291 75193239 -45091073 - Lx5 LINE L1 -3 7047 6091 2 1158 609 165 0 135 chr13 75193249 75193375 -45090937 + RLTR20A LTR ERVK 1 109 -432 2 1158 6265 120 47 15 chr13 75193375 75195015 -45089297 + L1_Mus4 LINE L1 4942 6636 0 2 1158 2323 169 4 79 chr13 75195026 75195410 -45088902 + RLTR20A LTR ERVK 97 450 -91 2 1158 306 73 0 0 chr13 75195410 75195451 -45088861 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1158 2323 169 4 79 chr13 75195451 75195547 -45088765 + RLTR20A LTR ERVK 451 541 0 2 1158 2526 148 61 13 chr13 75195557 75195873 -45088439 - Lx5 LINE L1 -967 6083 5750 2 1158 234 0 0 0 chr13 75195873 75195899 -45088413 + (TA)n Simple_repeat Simple_repeat 1 26 0 2 1158 2526 124 84 0 chr13 75195899 75196092 -45088220 - Lx5 LINE L1 -1301 5749 5547 2 1158 40 37 0 0 chr13 75196106 75196160 -45088152 + AT_rich Low_complexity Low_complexity 1 54 0 2 1158 388 252 113 8 chr13 75196167 75196204 -45088108 - Lx9 LINE L1 -1175 6469 6423 2 1158 234 0 0 0 chr13 75196204 75196230 -45088082 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 2 1158 388 252 113 8 chr13 75196230 75196316 -45087996 - Lx9 LINE L1 -1222 6422 6333 2 1158 2652 272 85 28 chr13 75196336 75197317 -45086995 + Lx9 LINE L1 6581 7617 -27 2 1158 414 0 0 0 chr13 75197317 75197363 -45086949 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1158 1593 270 100 16 chr13 75197364 75197966 -45086346 - Lx6 LINE L1 -45 7415 6517 2 1158 213 175 0 0 chr13 75198051 75198091 -45086221 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2 1158 258 255 6 46 chr13 75198884 75199057 -45085255 + (TATG)n Simple_repeat Simple_repeat 1 166 0 2 1158 3665 146 19 65 chr13 75199100 75199773 -45084539 + RLTR26 LTR ERVK 1 642 0 2 1158 867 136 0 20 chr13 75199783 75199933 -45084379 - L1_Mm LINE L1 -905 4978 4832 2 1158 320 93 0 0 chr13 75200925 75200968 -45083344 + L1_Mur1 LINE L1 4938 4980 -906 2 1158 369 133 0 0 chr13 75200979 75201039 -45083273 - RLTR26 LTR ERVK 0 642 583 2 1158 3416 177 35 25 chr13 75201039 75201716 -45082596 + Lx3A LINE L1 6290 6973 -8 2 1158 471 319 20 40 chr13 75203133 75203364 -45080948 + MTE2a LTR MaLR 1 199 -220 2 1158 3425 30 2 0 chr13 75203365 75203760 -45080552 - MTA_Mm LTR MaLR 0 396 1 2 1158 33 0 0 0 chr13 75203964 75203997 -45080315 + AT_rich Low_complexity Low_complexity 1 33 0 2 1158 329 303 0 0 chr13 75204846 75204935 -45079377 + PB1D10 SINE Alu 27 115 -2 2 1158 5537 143 31 37 chr13 75205073 75206996 -45077316 - L1VL2 LINE L1 -1789 1909 2 2 1158 217 51 25 25 chr13 75207154 75207194 -45077118 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1158 215 204 0 0 chr13 75208569 75208613 -45075699 + GA-rich Low_complexity Low_complexity 3 46 0 2 1158 249 305 52 45 chr13 75208952 75209086 -45075226 - MIRb SINE MIR -27 241 107 2 1158 242 245 0 0 chr13 75209198 75209247 -45075065 + MIR SINE MIR 109 157 -105 2 1158 243 0 0 0 chr13 75209649 75209676 -45074636 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 1158 7532 86 12 0 chr13 75209681 75211456 -45072856 - L1_Mus2 LINE L1 0 6566 4771 2 1158 3071 142 24 26 chr13 75211704 75212238 -45072074 - RMER16 LTR ERVK 0 533 1 2 1158 289 270 61 35 chr13 75212340 75212455 -45071857 - MIR SINE MIR -86 176 59 2 1158 1765 51 174 19 chr13 75213134 75213488 -45070824 - MT2C_Mm LTR ERVL 0 493 3 2 1158 565 287 152 36 chr13 75214192 75214691 -45069621 + L1MC4a LINE L1 7315 7871 -11 2 1158 561 213 8 8 chr13 75214686 75214809 -45069503 + Lx9 LINE L1 7295 7417 -227 2 1158 22 70 0 0 chr13 75214834 75214877 -45069435 + AT_rich Low_complexity Low_complexity 1 43 0 2 1158 216 158 0 0 chr13 75215125 75215163 -45069149 + GA-rich Low_complexity Low_complexity 3 40 0 2 1158 449 214 100 23 chr13 75215525 75215659 -45068653 + MTD LTR MaLR 240 405 -14 2 1158 26897 103 52 52 chr13 75216219 75220232 -45064080 + Lx3A LINE L1 208 4317 -2664 2 1158 624 154 14 0 chr13 75220232 75220362 -45063950 - B2_Mm2 SINE B2 -56 137 2 2 1158 26897 103 52 52 chr13 75220362 75221919 -45062393 + Lx3A LINE L1 4318 5914 -1067 2 1158 789 110 0 0 chr13 75221919 75222037 -45062275 + (GA)n Simple_repeat Simple_repeat 2 119 0 2 1158 7658 118 47 39 chr13 75222037 75223083 -45061229 + Lx3A LINE L1 5915 6978 -3 2 1158 985 127 23 0 chr13 75223170 75223343 -45060969 + GA-rich Low_complexity Low_complexity 2 178 0 2 1158 234 240 0 0 chr13 75223343 75223383 -45060929 + polypurine Low_complexity Low_complexity 12 51 0 2 1158 331 299 55 48 chr13 75223506 75223671 -45060641 - MER5A1 DNA MER1_type 0 166 1 2 1158 677 234 142 33 chr13 75225560 75225588 -45058724 + B4A SINE B4 57 85 -207 2 1158 198 0 0 0 chr13 75225588 75225610 -45058702 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 2 1158 677 234 142 33 chr13 75225610 75225793 -45058519 + B4A SINE B4 86 291 -1 2 1158 21 0 0 0 chr13 75229858 75229879 -45054433 + AT_rich Low_complexity Low_complexity 1 21 0 2 1158 24 32 0 0 chr13 75233705 75233736 -45050576 + AT_rich Low_complexity Low_complexity 1 31 0 2 1158 719 275 59 96 chr13 75233921 75234243 -45050069 - MT2B LTR ERVL 0 601 292 2 1158 279 328 106 65 chr13 75234336 75234535 -45049777 - MIR SINE MIR -46 216 10 2 1159 240 167 0 0 chr13 75239629 75239677 -45044635 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1159 1183 211 33 0 chr13 75240483 75240725 -45043587 + Lx7 LINE L1 6609 6858 -838 3 1159 661 297 16 48 chr13 75240726 75240977 -45043335 - Lx7 LINE L1 -1095 6601 6359 3 1159 2004 228 46 36 chr13 75240975 75241927 -45042385 + Lx7 LINE L1 5327 6300 -1396 3 1159 217 251 463 31 chr13 75243124 75243249 -45041063 - MIR SINE MIR -44 218 40 3 1159 1226 28 0 0 chr13 75244543 75244688 -45039624 - B1_Mus2 SINE Alu 0 147 3 3 1159 288 294 92 0 chr13 75245191 75245300 -45039012 + MIR SINE MIR 35 153 -109 3 1159 7412 84 12 3 chr13 75245308 75246809 -45037503 + L1_Mus3 LINE L1 5128 6638 0 3 1159 276 316 19 39 chr13 75246929 75247033 -45037279 - MIRc SINE MIR -105 163 58 3 1159 468 239 33 33 chr13 75247076 75247197 -45037115 - ID_B1 SINE B4 0 224 104 3 1159 422 259 94 22 chr13 75247197 75247214 -45037098 - B1F1 SINE Alu 0 149 2 3 1159 195 69 0 0 chr13 75248864 75248893 -45035419 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1159 778 104 170 0 chr13 75248903 75249038 -45035274 + B2_Mm2 SINE B2 1 158 -37 3 1159 252 86 0 0 chr13 75249038 75249073 -45035239 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1159 304 256 0 37 chr13 75249080 75249161 -45035151 + B4 SINE B4 215 292 0 3 1159 330 214 0 0 chr13 75249170 75249259 -45035053 + (CA)n Simple_repeat Simple_repeat 2 90 0 3 1159 274 331 27 14 chr13 75253288 75253435 -45030877 - L1M5 LINE L1 -449 5675 5527 3 1159 183 26 24 71 chr13 75253795 75253837 -45030475 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 3 1159 882 29 0 0 chr13 75254119 75254224 -45030088 + (CAGAA)n Simple_repeat Simple_repeat 3 107 0 3 1159 577 290 26 10 chr13 75254561 75254756 -45029556 - B3A SINE B2 0 198 1 3 1159 2447 209 14 26 chr13 75255032 75255537 -45028775 - RLTR16 LTR ERVK 0 505 7 3 1159 909 62 131 0 chr13 75255879 75256009 -45028303 + B1_Mus2 SINE Alu 1 147 0 3 1159 356 332 56 65 chr13 75256057 75256289 -45028023 - MIRb SINE MIR -17 251 22 3 1159 26 0 0 0 chr13 75256881 75256907 -45027405 + AT_rich Low_complexity Low_complexity 1 26 0 3 1159 201 156 22 0 chr13 75257242 75257276 -45027036 + T-rich Low_complexity Low_complexity 13 47 0 3 1159 1308 85 5 26 chr13 75257276 75257470 -45026842 - B2_Mm2 SINE B2 -4 191 2 3 1159 270 0 0 0 chr13 75257500 75257530 -45026782 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 3 1159 970 81 14 49 chr13 75257547 75257690 -45026622 - B1_Mus1 SINE Alu -10 138 1 3 1159 208 274 0 19 chr13 75258334 75258386 -45025926 - MIR3 SINE MIR -54 154 104 3 1159 651 112 0 0 chr13 75258434 75258532 -45025780 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 3 1159 1747 128 14 4 chr13 75258534 75258809 -45025503 - Lx2 LINE L1 -1 6996 6719 3 1159 249 278 79 40 chr13 75259128 75259229 -45025083 - MER76 LTR ERVL 0 691 587 3 1159 225 0 0 0 chr13 75259237 75259262 -45025050 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1159 878 321 131 34 chr13 75259273 75259686 -45024626 - MER76 LTR ERVL -202 489 37 3 1159 315 0 0 0 chr13 75259686 75259721 -45024591 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1159 1030 188 121 0 chr13 75260091 75260330 -45023982 - Lx9 LINE L1 -179 7465 7198 3 1159 569 313 7 32 chr13 75260366 75260521 -45023791 - RSINE1 SINE B4 0 165 15 3 1159 201 250 16 48 chr13 75260633 75260696 -45023616 + L3 LINE CR1 3070 3130 -1359 3 1159 556 81 23 0 chr13 75261065 75261152 -45023160 + (TTCTC)n Simple_repeat Simple_repeat 2 90 0 3 1159 462 260 105 78 chr13 75261152 75261402 -45022910 - RMER6A LTR ERVK -188 273 1 3 1159 5018 137 42 21 chr13 75261624 75262476 -45021836 - Lx2 LINE L1 0 6997 6128 3 1159 288 231 154 0 chr13 75262650 75262741 -45021571 - MER2 DNA MER2_type -140 205 101 3 1159 594 264 12 66 chr13 75264747 75264913 -45019399 + RSINE1 SINE B4 3 159 -6 3 1159 1027 109 7 26 chr13 75266300 75266451 -45017861 - B1_Mur4 SINE Alu -2 148 1 3 1159 490 293 31 37 chr13 75266565 75266728 -45017584 + RSINE1 SINE B4 4 165 0 3 1159 372 22 0 0 chr13 75266873 75266918 -45017394 + (TATG)n Simple_repeat Simple_repeat 2 46 0 3 1159 682 212 95 0 chr13 75266924 75267061 -45017251 - B3 SINE B2 -65 151 2 3 1159 21 0 0 0 chr13 75267348 75267369 -45016943 + AT_rich Low_complexity Low_complexity 1 21 0 3 1159 644 289 55 80 chr13 75268528 75268840 -45015472 + MER2 DNA MER2_type 10 313 -32 3 1159 230 406 102 0 chr13 75269105 75269292 -45015020 - MIRb SINE MIR -60 208 3 3 1159 228 200 0 0 chr13 75272381 75272431 -45011881 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1159 260 280 116 19 chr13 75273404 75273619 -45010693 - L1MA9 LINE L1 -256 6056 5821 3 1159 282 274 0 21 chr13 75273633 75273726 -45010586 - PB1D10 SINE Alu -17 100 10 3 1159 27 29 0 0 chr13 75274931 75274965 -45009347 + AT_rich Low_complexity Low_complexity 1 34 0 3 1159 1909 141 3 7 chr13 75275161 75275461 -45008851 - ORR1A2 LTR MaLR 0 327 29 3 1159 597 260 115 30 chr13 75275559 75275793 -45008519 - Lx8 LINE L1 -478 6995 6742 3 1159 31158 71 3 2 chr13 75275793 75280992 -45003320 + L1Md_F2 LINE L1 387 5584 -299 3 1159 7735 57 12 2 chr13 75280994 75281968 -45002344 + L1Md_F2 LINE L1 5587 6570 -12 3 1159 34 0 0 0 chr13 75282006 75282040 -45002272 + AT_rich Low_complexity Low_complexity 1 34 0 3 1159 303 317 63 24 chr13 75282085 75282211 -45002101 - Lx8 LINE L1 -138 7335 7205 3 1159 566 219 11 4 chr13 75282236 75282500 -45001812 + CT-rich Low_complexity Low_complexity 1 266 0 3 1159 1158 312 36 5 chr13 75282504 75282920 -45001392 - Lx8 LINE L1 -314 7159 6731 3 1159 537 286 22 2 chr13 75282918 75283095 -45001217 - Lx8 LINE L1 -431 7213 6930 3 1159 300 296 26 17 chr13 75283077 75283194 -45001118 - Lx8 LINE L1 -753 6720 6603 3 1159 486 0 0 0 chr13 75283408 75283462 -45000850 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1159 429 282 34 17 chr13 75283561 75283763 -45000549 + Lx9 LINE L1 5670 5909 -1735 3 1159 1338 292 192 6 chr13 75284019 75284740 -44999572 + Lx8 LINE L1 6476 7330 -143 3 1159 221 412 65 18 chr13 75285242 75285410 -44998902 - MIRc SINE MIR -58 210 35 3 1159 797 281 48 39 chr13 75285888 75286170 -44998142 + MTD LTR MaLR 57 330 -49 3 1159 255 31 0 0 chr13 75286371 75286403 -44997909 + (TG)n Simple_repeat Simple_repeat 1 32 0 3 1159 516 56 0 0 chr13 75286403 75286474 -44997838 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 1159 204 0 0 77 chr13 75286681 75286720 -44997592 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 3 1159 1146 61 0 13 chr13 75286720 75286869 -44997443 - B1_Mus1 SINE Alu -1 147 1 3 1159 234 224 86 0 chr13 75287097 75287155 -44997157 + Arthur1C DNA Tip100 299 361 -2 3 1159 199 392 30 30 chr13 75287546 75287646 -44996666 + L2c LINE L2 3101 3200 -187 3 1159 444 19 0 0 chr13 75287669 75287722 -44996590 + (CA)n Simple_repeat Simple_repeat 1 53 0 3 1159 234 362 0 0 chr13 75288252 75288332 -44995980 - MIR SINE MIR -108 154 75 3 1159 4089 70 125 3 chr13 75289103 75289695 -44994617 - L1Md_F2 LINE L1 -2 6580 5917 3 1159 3738 38 4 0 chr13 75289693 75290146 -44994166 + L1Md_F2 LINE L1 6128 6582 0 3 1159 27374 83 18 0 chr13 75290152 75294748 -44989564 - L1Md_F LINE L1 -683 5200 523 3 1159 246 330 77 10 chr13 75294794 75294898 -44989414 - Charlie1a DNA MER1_type -1334 121 11 3 1159 249 263 0 13 chr13 75295263 75295340 -44988972 + (CAAA)n Simple_repeat Simple_repeat 1 76 0 3 1159 207 283 0 0 chr13 75295783 75295836 -44988476 + GA-rich Low_complexity Low_complexity 4 56 0 3 1159 447 227 79 6 chr13 75295849 75296013 -44988299 - L1MA9 LINE L1 -343 5969 5794 3 1159 1375 204 32 0 chr13 75296038 75296323 -44987989 + Lx9 LINE L1 7020 7313 -331 3 1159 1030 235 118 89 chr13 75296323 75296367 -44987945 - RMER6B LTR ERVK 0 461 436 3 1159 997 110 7 14 chr13 75296367 75296515 -44987797 - B1_Mm SINE Alu 0 147 1 3 1159 1030 235 118 89 chr13 75296515 75296918 -44987394 - RMER6B LTR ERVK -26 435 1 3 1159 772 220 17 0 chr13 75296919 75297096 -44987216 + Lx9 LINE L1 7309 7488 -156 3 1159 206 62 0 30 chr13 75297380 75297413 -44986899 + (TTTCC)n Simple_repeat Simple_repeat 2 33 0 3 1159 389 162 50 20 chr13 75298482 75298583 -44985729 + L1_Mus1 LINE L1 6464 6567 0 3 1159 249 337 58 29 chr13 75299798 75299902 -44984410 - PB1D10 SINE Alu -1 116 10 3 1159 352 348 102 19 chr13 75300012 75300276 -44984036 - B4A SINE B4 -4 288 3 3 1159 394 288 68 0 chr13 75300287 75300405 -44983907 - B1F2 SINE Alu -1 148 23 3 1159 1087 73 12 12 chr13 75301322 75301488 -44982824 - L1_Mus3 LINE L1 0 6638 6473 3 1159 462 129 0 0 chr13 75301545 75301630 -44982682 + (GA)n Simple_repeat Simple_repeat 2 86 0 3 1159 323 82 0 0 chr13 75301641 75301690 -44982622 - L1VL1 LINE L1 -5597 825 777 3 1159 1713 135 28 0 chr13 75301673 75301962 -44982350 - L1VL1 LINE L1 -6070 352 56 3 1159 5641 83 53 15 chr13 75301963 75302780 -44981532 - L1_Mus3 LINE L1 -14 6624 5777 3 1159 17325 117 20 96 chr13 75302794 75303178 -44981134 - L1VL4 LINE L1 -1291 4592 4209 3 1159 216 0 0 0 chr13 75303178 75303202 -44981110 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1159 189 0 0 0 chr13 75303202 75303222 -44981090 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 1159 17325 117 20 96 chr13 75303222 75303828 -44980484 - L1VL4 LINE L1 -1675 4208 3597 3 1159 2211 68 123 0 chr13 75303828 75304076 -44980236 + ORR1A1 LTR MaLR 1 286 -60 3 1159 188 34 0 33 chr13 75304076 75304106 -44980206 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1159 2211 68 123 0 chr13 75304106 75304165 -44980147 + ORR1A1 LTR MaLR 287 345 -1 3 1159 13552 67 6 3 chr13 75304165 75305953 -44978359 + ORR1A1-int LTR MaLR 1 1792 0 3 1159 2142 40 123 29 chr13 75305953 75306262 -44978050 + ORR1A1 LTR MaLR 1 338 -8 3 1159 17325 124 18 88 chr13 75306262 75309089 -44975223 - L1VL4 LINE L1 -2287 3596 757 3 1159 27808 55 0 5 chr13 75309093 75314004 -44970308 + L1Md_T LINE L1 1 4879 -1007 3 1159 24593 27 0 0 chr13 75314004 75317718 -44966594 - L1Md_T LINE L1 0 6582 2896 3 1159 6051 11 7 0 chr13 75317715 75318438 -44965874 + L1Md_T LINE L1 4862 5589 -297 3 1159 8369 37 0 0 chr13 75318438 75319433 -44964879 + L1Md_T LINE L1 5591 6585 0 3 1159 477 268 50 40 chr13 75319439 75319641 -44964671 - L1VL4 LINE L1 -6098 204 1 3 1159 236 317 87 43 chr13 75319832 75320063 -44964249 - L2a LINE L2 -1 3425 3185 3 1159 1949 194 128 31 chr13 75320162 75320679 -44963633 - RMER2 LTR ERV1 0 567 1 4 1159 24 32 0 0 chr13 75320734 75320765 -44963547 + AT_rich Low_complexity Low_complexity 1 31 0 4 1159 631 286 50 157 chr13 75320885 75321204 -44963108 - B4 SINE B4 -6 286 2 4 1159 1985 104 192 11 chr13 75321317 75321686 -44962626 + BGLII_B LTR ERVK 3 438 -3 4 1159 550 332 118 15 chr13 75321795 75322067 -44962245 - MLT2B2 LTR ERVL -213 302 3 4 1159 361 252 204 19 chr13 75322462 75322624 -44961688 + Lx8 LINE L1 7092 7283 -190 4 1159 1254 272 73 9 chr13 75322633 75322974 -44961338 + ORR1D2 LTR MaLR 8 370 0 4 1159 954 175 6 0 chr13 75323057 75323228 -44961084 + URR1B DNA MER1_type 53 224 -1 4 1159 315 198 112 9 chr13 75323234 75323341 -44960971 + Lx8 LINE L1 7353 7470 -3 4 1159 7628 43 10 5 chr13 75323394 75324501 -44959811 - L1Md_F2 LINE L1 -2 6580 5468 4 1159 716 239 101 73 chr13 75324568 75324925 -44959387 + RLTR9A LTR ERVK 2 368 0 4 1159 309 247 13 52 chr13 75325692 75325769 -44958543 - MLT1I LTR MaLR -3 408 335 4 1159 543 141 0 0 chr13 75325926 75326018 -44958294 + (CATATA)n Simple_repeat Simple_repeat 2 93 0 4 1159 1321 99 11 0 chr13 75326118 75326300 -44958012 + B2_Mm2 SINE B2 3 186 -9 4 1159 25 0 0 0 chr13 75326381 75326406 -44957906 + AT_rich Low_complexity Low_complexity 1 25 0 4 1159 312 362 51 16 chr13 75326557 75326751 -44957561 - B4A SINE B4 -2 290 88 4 1159 1799 168 78 88 chr13 75327195 75327606 -44956706 + MTB_Mm LTR MaLR 1 407 0 4 1159 201 108 0 0 chr13 75327730 75327767 -44956545 + (T)n Simple_repeat Simple_repeat 1 37 0 4 1159 252 159 71 24 chr13 75327996 75328080 -44956232 - Lx5 LINE L1 -1348 5702 5615 4 1159 431 120 0 26 chr13 75328107 75328184 -44956128 + (CCCCCT)n Simple_repeat Simple_repeat 6 80 0 4 1159 286 275 19 29 chr13 75328295 75328400 -44955912 + HERV16-int LTR ERVL 1077 1180 -3816 4 1159 1535 222 65 65 chr13 75329385 75329828 -44954484 - RLTR20B3 LTR ERVK -56 521 72 4 1159 191 36 36 0 chr13 75329943 75329971 -44954341 + (TTATA)n Simple_repeat Simple_repeat 3 31 0 4 1159 2166 188 18 23 chr13 75330872 75331313 -44952999 + BGLII_B LTR ERVK 1 439 -2 4 1159 282 286 0 28 chr13 75332538 75332646 -44951666 + L1VL2 LINE L1 179 276 -6142 4 1159 2976 211 99 27 chr13 75332638 75333482 -44950830 + L1_Mus2 LINE L1 332 1236 -5380 4 1159 4353 98 5 0 chr13 75333448 75334083 -44950229 + MusHAL1 LINE L1 1 638 -2074 4 1159 14636 113 1 26 chr13 75334072 75336659 -44947653 + L1_Mus2 LINE L1 3640 6154 -412 4 1159 6917 58 41 2 chr13 75337725 75338608 -44945704 - L1_Mus1 LINE L1 0 6567 5651 4 1159 542 313 9 10 chr13 75338620 75338768 -44945544 - ID_B1 SINE B4 -46 246 96 4 1159 616 329 94 57 chr13 75339020 75339391 -44944921 + MLT1F2 LTR MaLR 145 529 -31 4 1159 198 230 175 58 chr13 75339648 75339768 -44944544 + L2b LINE L2 2953 3086 -289 4 1159 292 38 74 37 chr13 75339943 75340024 -44944288 + (CAAA)n Simple_repeat Simple_repeat 2 85 0 4 1159 22 0 0 0 chr13 75340484 75340506 -44943806 + AT_rich Low_complexity Low_complexity 1 22 0 4 1159 935 90 0 14 chr13 75340537 75340683 -44943629 - L1_Mus4 LINE L1 0 6636 6493 4 1159 1518 87 62 5 chr13 75340683 75340892 -44943420 + L1_Mus4 LINE L1 6060 6280 -356 4 1159 250 274 14 14 chr13 75341046 75341120 -44943192 + L1M5 LINE L1 5637 5710 -469 4 1159 474 260 179 1 chr13 75341132 75341353 -44942959 + L1ME1 LINE L1 5667 5928 -431 4 1159 414 0 0 0 chr13 75342371 75342417 -44941895 + (TC)n Simple_repeat Simple_repeat 2 47 0 4 1159 279 0 0 0 chr13 75342417 75342447 -44941865 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1159 485 297 148 5 chr13 75342693 75342889 -44941423 + MTEa LTR MaLR 1 224 -155 4 1159 1245 174 31 27 chr13 75343165 75343390 -44940922 - URR1A DNA MER1_type 0 226 1 4 1159 15549 12 3 14 chr13 75343393 75346134 -44938178 + L1Md_A LINE L1 264 2969 -2914 4 1159 2392 111 111 3 chr13 75346135 75346506 -44937806 - IAPLTR2a LTR ERVK 0 411 1 4 1159 6451 30 3 7 chr13 75346506 75347255 -44937057 - IAPEz-int LTR ERVK 0 6481 5736 4 1159 2229 68 0 0 chr13 75347254 75347532 -44936780 - IAPEz-int LTR ERVK -4845 1636 1359 4 1159 3621 69 3 35 chr13 75347532 75348287 -44936025 - IAPEz-int LTR ERVK -5819 662 9 4 1159 2436 110 105 3 chr13 75348288 75348661 -44935651 - IAPLTR2a LTR ERVK 0 411 1 4 1159 23447 8 0 0 chr13 75348661 75351276 -44933036 + L1Md_A LINE L1 2971 5586 -297 4 1159 9372 16 0 0 chr13 75351276 75352272 -44932040 + L1Md_A LINE L1 5587 6582 0 4 1159 257 186 172 47 chr13 75352708 75352877 -44931435 - Charlie2b DNA MER1_type -4 2778 2589 4 1159 369 47 47 0 chr13 75353017 75353081 -44931231 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 1159 636 164 0 0 chr13 75353213 75353390 -44930922 + (CA)n Simple_repeat Simple_repeat 2 178 0 4 1159 239 141 16 0 chr13 75353407 75353471 -44930841 + (CAGAGA)n Simple_repeat Simple_repeat 4 68 0 4 1159 249 317 51 70 chr13 75354381 75354537 -44929775 + RLTR41 LTR ERV1 251 403 -43 4 1159 6902 79 3 12 chr13 75354671 75354972 -44929340 + L1_Mus3 LINE L1 5709 6005 -633 4 1159 4704 159 112 75 chr13 75354972 75355958 -44928354 - RLTR13D2 LTR ERVK -1 1022 1 4 1159 6902 79 3 12 chr13 75355958 75356594 -44927718 + L1_Mus3 LINE L1 6006 6638 0 4 1159 279 0 0 0 chr13 75356594 75356625 -44927687 + (GA)n Simple_repeat Simple_repeat 1 31 0 4 1159 768 77 0 0 chr13 75356626 75356730 -44927582 + (GGAA)n Simple_repeat Simple_repeat 1 104 0 4 1159 335 193 202 44 chr13 75356816 75356930 -44927382 + B1F SINE Alu 17 148 -1 4 1159 208 375 0 24 chr13 75357071 75357153 -44927159 + MER5A DNA MER1_type 5 84 -105 4 1159 237 261 45 30 chr13 75357172 75357239 -44927073 + MER5B DNA MER1_type 111 178 0 4 1159 1219 220 5 9 chr13 75357322 75357538 -44926774 - B3 SINE B2 0 216 2 4 1159 1175 187 51 9 chr13 75358375 75358591 -44925721 + URR1B DNA MER1_type 1 225 0 4 1159 959 315 48 21 chr13 75358607 75358993 -44925319 + MTE-int LTR MaLR 160 522 -987 4 1159 1762 106 68 18 chr13 75358993 75359273 -44925039 + L1_Mm LINE L1 5260 5553 -330 4 1159 1604 86 194 0 chr13 75359268 75359536 -44924776 + L1_Mus4 LINE L1 6297 6616 -20 4 1159 2081 131 3 0 chr13 75359544 75359849 -44924463 + ORR1A2 LTR MaLR 14 319 -8 4 1159 10818 134 100 13 chr13 75359857 75361660 -44922652 + ORR1A2-int LTR MaLR 4 1963 0 4 1159 1764 160 38 22 chr13 75361660 75361973 -44922339 + ORR1A2 LTR MaLR 1 318 -9 4 1159 1567 139 77 0 chr13 75361977 75362236 -44922076 + ORR1A4 LTR MaLR 43 321 -8 4 1159 356 165 0 36 chr13 75362270 75362361 -44921951 - ORR1A2 LTR MaLR -119 227 139 4 1159 270 56 0 0 chr13 75364037 75364073 -44920239 + (GGAGAA)n Simple_repeat Simple_repeat 3 38 0 4 1159 26 50 0 0 chr13 75364554 75364594 -44919718 + AT_rich Low_complexity Low_complexity 1 40 0 4 1159 380 311 29 10 chr13 75365001 75365105 -44919207 - PB1D9 SINE Alu -14 106 1 4 1160 262 200 43 0 chr13 75367059 75367129 -44917183 + (CCCTAA)n Simple_repeat Simple_repeat 3 75 0 4 1160 235 281 26 71 chr13 75367629 75367771 -44916541 - MIRb SINE MIR -82 194 57 4 1160 396 0 0 0 chr13 75367827 75367871 -44916441 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1160 725 302 72 101 chr13 75368686 75369102 -44915210 + MTD LTR MaLR 1 404 -15 4 1160 1757 132 37 0 chr13 75371013 75371285 -44913027 + Lx2 LINE L1 6715 6996 -1 4 1160 261 296 12 12 chr13 75371745 75371827 -44912485 + ID4_ SINE ID 2 83 0 4 1160 432 0 0 0 chr13 75371977 75372025 -44912287 + (TA)n Simple_repeat Simple_repeat 1 48 0 4 1160 3468 88 4 43 chr13 75372026 75372515 -44911797 - L1_Mus3 LINE L1 -7 6631 6162 4 1160 3993 172 11 6 chr13 75373104 75373746 -44910566 - Lx5 LINE L1 -3 7047 6403 4 1160 1102 186 0 25 chr13 75373746 75373944 -44910368 + Lx5 LINE L1 6218 6410 -640 4 1160 1717 205 42 102 chr13 75374174 75374530 -44909782 - Lx7 LINE L1 0 7696 7368 4 1160 426 39 0 0 chr13 75374530 75374582 -44909730 + (GA)n Simple_repeat Simple_repeat 2 53 0 4 1160 1717 205 42 102 chr13 75374582 75374794 -44909518 - Lx7 LINE L1 -329 7367 7162 4 1160 206 250 0 0 chr13 75374821 75374873 -44909439 + T-rich Low_complexity Low_complexity 1 52 0 4 1160 22 0 0 0 chr13 75375467 75375489 -44908823 + AT_rich Low_complexity Low_complexity 1 22 0 4 1160 327 252 96 0 chr13 75375955 75376070 -44908242 + MER105 DNA DNA 44 169 -35 4 1160 340 274 235 30 chr13 75376070 75376202 -44908110 + RSINE1 SINE B4 5 163 -2 4 1160 21 36 0 0 chr13 75376228 75376256 -44908056 + AT_rich Low_complexity Low_complexity 1 28 0 4 1160 194 304 34 43 chr13 75376384 75376501 -44907811 - MIRb SINE MIR 0 268 153 4 1160 1582 254 138 43 chr13 75376551 75377131 -44907181 - RLTR26 LTR ERVK -7 635 1 4 1160 246 32 0 0 chr13 75378118 75378149 -44906163 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1160 327 41 0 20 chr13 75379145 75379195 -44905117 + L1_Mus2 LINE L1 6518 6566 0 4 1160 2587 102 22 0 chr13 75379310 75379673 -44904639 + L1_Mus3 LINE L1 6268 6638 0 4 1160 543 66 0 0 chr13 75379673 75379749 -44904563 + (GGAA)n Simple_repeat Simple_repeat 4 79 0 4 1160 351 0 0 0 chr13 75379819 75379858 -44904454 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1160 2659 153 106 10 chr13 75379858 75380341 -44903971 + RLTR20C LTR ERVK 2 530 -4 4 1160 447 52 0 0 chr13 75380342 75380400 -44903912 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1160 188 184 0 20 chr13 75380541 75380591 -44903721 + (CTA)n Simple_repeat Simple_repeat 2 50 0 4 1160 198 150 0 0 chr13 75380598 75380638 -44903674 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1160 432 271 0 0 chr13 75380655 75380825 -44903487 + (CA)n Simple_repeat Simple_repeat 2 171 0 4 1160 350 123 0 17 chr13 75380825 75380883 -44903429 + HAL1-3A_ME LINE L1 1976 2032 -826 4 1160 248 280 113 38 chr13 75381135 75381289 -44903023 + MIR3 SINE MIR 85 237 -31 4 1160 306 278 55 191 chr13 75381392 75381628 -44902684 + MER20 DNA MER1_type 4 207 -12 4 1160 549 0 0 0 chr13 75382964 75383025 -44901287 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 4 1160 330 267 59 30 chr13 75383025 75383160 -44901152 + MIR SINE MIR 115 253 -9 4 1160 207 0 0 0 chr13 75383504 75383527 -44900785 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 4 1160 12507 148 23 5 chr13 75383527 75386424 -44897888 - Lx LINE L1 -11 6643 3690 4 1160 283 139 0 0 chr13 75386425 75386468 -44897844 - MusHAL1 LINE L1 -1648 1705 1663 5 1160 14601 157 47 35 chr13 75386470 75388334 -44895978 - Lx2 LINE L1 -400 6597 4679 5 1160 377 228 12 48 chr13 75388334 75388417 -44895895 - RLTR31_Mur LTR ERVK 0 553 474 5 1160 14601 157 47 35 chr13 75388417 75388442 -44895870 - Lx2 LINE L1 -400 4678 4652 5 1160 1965 122 119 25 chr13 75388442 75388650 -44895662 - RLTR31_Mur LTR ERVK -159 394 180 5 1160 2012 188 77 108 chr13 75388650 75389199 -44895113 - RMER16 LTR ERVK -1 532 1 5 1160 1965 122 119 25 chr13 75389199 75389350 -44894962 - RLTR31_Mur LTR ERVK -374 179 1 5 1160 14601 174 32 154 chr13 75389350 75389725 -44894587 - Lx2 LINE L1 -1224 4653 4279 5 1160 743 76 9 0 chr13 75389725 75389830 -44894482 - B1_Mus2 SINE Alu -1 146 41 5 1160 332 157 14 54 chr13 75389772 75389846 -44894466 - RLTR25B LTR ERVK -530 498 428 5 1160 14601 174 32 154 chr13 75389846 75392229 -44892083 - Lx2 LINE L1 -1224 4278 1888 5 1160 7726 64 0 10 chr13 75392251 75393308 -44891004 - L1Md_F2 LINE L1 0 6582 5540 5 1160 4299 113 2 0 chr13 75393297 75394108 -44890204 - MusHAL1 LINE L1 -2018 1335 524 5 1160 757 127 0 21 chr13 75394110 75394255 -44890057 - RMER17B LTR ERVK -498 460 319 5 1160 1445 108 14 23 chr13 75394298 75394516 -44889796 + LTRIS2 LTR ERV1 4 219 -345 5 1160 3222 127 61 36 chr13 75394517 75395155 -44889157 + ETnERV2-int LTR ERVK 2821 3474 -3932 5 1160 1439 199 19 73 chr13 75395162 75395530 -44888782 + ETnERV2-int LTR ERVK 4397 4744 -1064 5 1160 2446 188 2 11 chr13 75395532 75395985 -44888327 + ETnERV2-int LTR ERVK 5335 5783 -25 5 1160 4565 137 19 48 chr13 75395995 75396669 -44887643 + RLTR13D1 LTR ERVK 1 659 -147 5 1160 312 55 36 18 chr13 75396669 75396725 -44887587 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1160 4565 137 19 48 chr13 75396725 75396880 -44887432 + RLTR13D1 LTR ERVK 660 805 -1 5 1160 4164 188 68 13 chr13 75397618 75398469 -44885843 - Lx5 LINE L1 0 7050 6153 5 1160 359 21 21 0 chr13 75400402 75400450 -44883862 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1160 198 0 0 0 chr13 75400450 75400471 -44883841 + (GA)n Simple_repeat Simple_repeat 2 23 0 5 1160 245 297 111 30 chr13 75402303 75402501 -44881811 + L1M4 LINE L1 5399 5612 -562 5 1160 1827 104 98 29 chr13 75402506 75402822 -44881490 - Lx LINE L1 -12 6642 6305 5 1160 250 318 21 85 chr13 75403029 75403170 -44881142 - RMER4A LTR ERVK -323 143 12 5 1160 907 306 69 30 chr13 75403261 75403564 -44880748 + MTE2a LTR MaLR 41 355 -24 5 1160 447 61 24 35 chr13 75403566 75403651 -44880661 + (CAA)n Simple_repeat Simple_repeat 2 85 0 5 1160 277 322 8 8 chr13 75403810 75403932 -44880380 - Lx7 LINE L1 -12 7684 7563 5 1160 2012 274 74 45 chr13 75403937 75404735 -44879577 - Lx7 LINE L1 -267 7429 6609 5 1160 438 20 0 0 chr13 75405064 75405115 -44879197 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1160 1189 198 99 0 chr13 75405821 75405937 -44878375 - RMER1C Other Other -4 1338 1221 5 1160 648 70 0 0 chr13 75405937 75406023 -44878289 + (GGA)n Simple_repeat Simple_repeat 3 88 0 5 1160 1189 198 99 0 chr13 75406023 75406169 -44878143 - RMER1C Other Other -122 1220 1051 5 1160 315 0 0 0 chr13 75406524 75406559 -44877753 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 1160 493 325 66 75 chr13 75406572 75406860 -44877452 - B4A SINE B4 -4 288 20 5 1160 448 157 0 11 chr13 75406965 75407055 -44877257 + Lx9 LINE L1 7534 7622 -22 5 1160 539 184 172 30 chr13 75407060 75407309 -44877003 - RMER17C LTR ERVK 0 410 1 5 1160 762 43 0 0 chr13 75407697 75407791 -44876521 + (AGTAG)n Simple_repeat Simple_repeat 2 95 0 5 1160 287 321 104 59 chr13 75408186 75408388 -44875924 + LTR83 LTR ERVL 50 260 -520 5 1160 1337 307 121 20 chr13 75408391 75408886 -44875426 - MLT1F LTR MaLR -3 545 1 5 1160 715 326 123 50 chr13 75408886 75409367 -44874945 + LTR83 LTR ERVL 257 772 -8 5 1160 201 154 0 0 chr13 75409687 75409726 -44874586 + A-rich Low_complexity Low_complexity 3 41 0 5 1160 18795 139 153 8 chr13 75409865 75415305 -44869007 + L1_Mus3 LINE L1 362 6637 -1 5 1160 1125 259 30 0 chr13 75415474 75415744 -44868568 + MTE2b LTR MaLR 1 278 -101 5 1160 325 321 15 15 chr13 75415808 75415944 -44868368 - ORR1E LTR MaLR -199 160 25 5 1160 802 195 39 105 chr13 75416110 75416229 -44868083 - Lx7 LINE L1 0 7696 7580 5 1160 243 0 0 0 chr13 75416229 75416256 -44868056 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1160 802 195 39 105 chr13 75416256 75416394 -44867918 - Lx7 LINE L1 -117 7579 7456 5 1160 575 254 72 0 chr13 75416582 75416720 -44867592 + B1_Mur3 SINE Alu 2 149 0 5 1160 565 172 0 16 chr13 75417561 75417685 -44866627 + (TA)n Simple_repeat Simple_repeat 1 122 0 5 1160 23 54 0 0 chr13 75418329 75418366 -44865946 + AT_rich Low_complexity Low_complexity 1 37 0 5 1160 1361 238 51 23 chr13 75418648 75419001 -44865311 - Lx5 LINE L1 -3 7047 6685 5 1160 19281 134 65 22 chr13 75419997 75422154 -44862158 - Lx3C LINE L1 -1 6975 4667 5 1160 1178 74 0 0 chr13 75422154 75422302 -44862010 + B1_Mus1 SINE Alu 1 148 0 5 1160 19281 94 46 23 chr13 75422302 75424226 -44860086 - Lx3C LINE L1 -1220 4666 2788 5 1160 12537 152 44 72 chr13 75424226 75426215 -44858097 - L1_Mur1 LINE L1 -909 4977 3010 5 1160 1123 82 0 0 chr13 75426215 75426361 -44857951 - B1_Mus2 SINE Alu 0 147 2 5 1160 12537 152 44 72 chr13 75426361 75427146 -44857166 - L1_Mur1 LINE L1 -2877 3009 2283 5 1160 852 271 108 98 chr13 75427148 75427353 -44856959 - RMER16 LTR ERVK 0 533 338 5 1160 308 67 0 0 chr13 75427353 75427398 -44856914 - L1_Mus2 LINE L1 -1 6565 6521 5 1160 878 217 87 97 chr13 75427398 75427479 -44856833 - RMER16 LTR ERVK -132 401 358 5 1160 1829 184 90 78 chr13 75427479 75428056 -44856256 - RLTR31A_Mm LTR ERVK 0 584 1 5 1160 878 189 77 96 chr13 75428056 75428296 -44856016 - RMER16 LTR ERVK -176 357 2 5 1160 10130 147 33 34 chr13 75428296 75430139 -44854173 - RMER16-int LTR ERVK 0 5406 3567 5 1160 755 126 17 0 chr13 75430163 75430282 -44854030 - RLTR19-int LTR ERVK -2449 3688 3568 5 1160 3383 144 191 25 chr13 75430266 75431162 -44853150 - RLTR19-int LTR ERVK -4749 1388 345 5 1160 630 285 0 17 chr13 75431138 75431313 -44852999 - RLTR19-int LTR ERVK -5220 186 15 5 1160 1073 180 98 69 chr13 75431314 75431644 -44852668 - RMER16 LTR ERVK 0 533 22 5 1160 350 320 0 71 chr13 75431676 75431844 -44852468 + RLTR26 LTR ERVK 390 545 -97 5 1160 332 284 83 21 chr13 75431875 75432019 -44852293 + RLTR26 LTR ERVK 485 637 -5 5 1160 5897 158 8 6 chr13 75432044 75433210 -44851102 - L1_Mur1 LINE L1 -3600 2286 1117 5 1160 271 271 37 111 chr13 75434133 75434295 -44850017 + RMER17C-int LTR ERVK 375 524 -2714 5 1160 473 349 0 15 chr13 75434246 75434444 -44849868 + RodERV21-int LTR ERV1 705 899 -4092 5 1160 5156 133 45 7 chr13 75434449 75435730 -44848582 - L1VL2 LINE L1 -2212 1403 68 5 1160 2593 161 35 72 chr13 75435732 75436386 -44847926 - L1_Mur3 LINE L1 -2417 3463 2834 5 1160 6342 239 36 5 chr13 75436373 75437725 -44846587 + Lx6 LINE L1 6057 7450 -10 5 1160 335 339 38 54 chr13 75437794 75437978 -44846334 + MLT1K LTR MaLR 392 572 -23 5 1160 22 0 0 0 chr13 75438020 75438042 -44846270 + AT_rich Low_complexity Low_complexity 1 22 0 5 1160 181 312 107 46 chr13 75438452 75438583 -44845729 - MIR SINE MIR -59 203 65 5 1160 687 44 0 0 chr13 75438776 75438867 -44845445 + (TG)n Simple_repeat Simple_repeat 1 91 0 5 1160 897 197 41 72 chr13 75442211 75442514 -44841798 + Lx9 LINE L1 5676 6003 -1641 5 1160 674 266 182 9 chr13 75442668 75442899 -44841413 + Lx9 LINE L1 6336 6606 -1038 5 1160 3356 234 39 19 chr13 75442902 75443757 -44840555 + Lx9 LINE L1 6720 7591 -53 5 1160 217 158 0 50 chr13 75443765 75443825 -44840487 + T-rich Low_complexity Low_complexity 4 60 0 5 1160 40 0 0 0 chr13 75443847 75443887 -44840425 + AT_rich Low_complexity Low_complexity 1 40 0 5 1160 311 329 50 44 chr13 75444584 75444743 -44839569 + MIRc SINE MIR 83 242 -26 5 1160 327 141 0 0 chr13 75446255 75446319 -44837993 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 1160 353 215 11 22 chr13 75446396 75446577 -44837735 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1160 336 299 103 0 chr13 75446701 75446808 -44837504 - B4A SINE B4 -173 119 2 5 1160 835 176 68 84 chr13 75447392 75447584 -44836728 + ORR1A3 LTR MaLR 1 162 -164 5 1160 917 314 59 36 chr13 75447592 75447896 -44836416 + MLT2B2 LTR ERVL 1 311 -204 5 1160 1753 234 16 5 chr13 75447949 75448318 -44835994 - Lx5 LINE L1 -3 7047 6675 5 1160 265 335 55 75 chr13 75448318 75448447 -44835865 + MLT2B2 LTR ERVL 372 499 -68 5 1160 522 0 0 0 chr13 75448447 75448505 -44835807 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 5 1160 265 335 55 75 chr13 75448505 75448550 -44835762 + MLT2B2 LTR ERVL 500 542 -25 5 1160 673 290 72 0 chr13 75448550 75448743 -44835569 - B3 SINE B2 -8 208 2 5 1160 265 335 55 75 chr13 75448743 75448767 -44835545 + MLT2B2 LTR ERVL 543 566 -1 5 1160 421 326 74 22 chr13 75448817 75449046 -44835266 + L1M5 LINE L1 5523 5763 -410 5 1160 7092 127 9 40 chr13 75450184 75451334 -44832978 - RLTR13D3 LTR ERVK 0 1114 1 5 1160 195 385 99 6 chr13 75452065 75452227 -44832085 + MIR SINE MIR 7 183 -79 5 1160 33 25 0 0 chr13 75452354 75452394 -44831918 + AT_rich Low_complexity Low_complexity 1 40 0 5 1160 665 274 54 5 chr13 75452400 75452605 -44831707 + B3 SINE B2 2 216 0 5 1160 2315 110 0 21 chr13 75452670 75453004 -44831308 + ORR1A2 LTR MaLR 1 327 0 5 1160 351 301 78 17 chr13 75453259 75453374 -44830938 + RSINE1 SINE B4 44 165 0 5 1160 535 326 6 6 chr13 75453672 75453848 -44830464 + GA-rich Low_complexity Low_complexity 3 178 0 5 1160 25 0 0 0 chr13 75454252 75454277 -44830035 + AT_rich Low_complexity Low_complexity 1 25 0 5 1160 339 296 127 97 chr13 75455749 75455977 -44828335 + HAL1-3A_ME LINE L1 1975 2209 -649 5 1160 405 0 0 0 chr13 75456414 75456459 -44827853 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1160 240 59 0 0 chr13 75457567 75457601 -44826711 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1160 306 0 0 0 chr13 75457708 75457742 -44826570 + (TCC)n Simple_repeat Simple_repeat 3 36 0 5 1160 23714 159 32 8 chr13 75457742 75463822 -44820490 - Lx LINE L1 -8 6646 419 5 1160 8449 95 12 3 chr13 75463923 75465195 -44819117 + Lx3_Mus LINE L1 2704 3986 -1900 5 1160 13024 94 16 10 chr13 75466151 75467464 -44816848 + Lx3_Mus LINE L1 3962 5266 -620 5 1160 186 71 0 0 chr13 75467464 75467492 -44816820 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 5 1160 13024 97 24 15 chr13 75467492 75468598 -44815714 + Lx3_Mus LINE L1 5267 6395 -614 5 1160 2419 147 45 14 chr13 75468744 75469164 -44815148 + RMER17C-int LTR ERVK 2806 3238 0 5 1160 756 166 53 7 chr13 75469164 75469316 -44814996 + RMER17C LTR ERVK 1 159 -251 5 1160 423 290 21 0 chr13 75469314 75469407 -44814905 + RSINE1 SINE B4 56 150 -15 5 1160 25 65 0 0 chr13 75469425 75469471 -44814841 + AT_rich Low_complexity Low_complexity 1 46 0 5 1160 197 65 0 31 chr13 75470058 75470090 -44814222 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1160 519 283 33 16 chr13 75470888 75471071 -44813241 + B3A SINE B2 5 190 -8 5 1160 405 0 0 0 chr13 75475715 75475760 -44808552 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 5 1160 450 322 102 40 chr13 75476018 75476419 -44807893 + Lx8 LINE L1 6599 7162 -482 5 1160 4398 173 71 14 chr13 75476724 75477580 -44806732 + RMER13B LTR ERVK 1 905 -3 5 1160 22 56 0 0 chr13 75478968 75479004 -44805308 + AT_rich Low_complexity Low_complexity 1 36 0 5 1160 1204 148 104 14 chr13 75479020 75479032 -44805280 + RMER17C LTR ERVK 96 107 -303 5 1160 4701 121 8 7 chr13 75479032 75479758 -44804554 - L1_Mus3 LINE L1 0 6638 5912 5 1160 1620 0 0 0 chr13 75479758 75479938 -44804374 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 6 1160 1204 148 104 14 chr13 75479938 75480211 -44804101 + RMER17C LTR ERVK 108 407 -3 5 1160 989 279 143 0 chr13 75480728 75481053 -44803259 - MTE2b LTR MaLR -6 364 2 6 1160 2132 138 38 154 chr13 75481294 75481799 -44802513 - RLTR41 LTR ERV1 0 446 1 6 1160 215 300 0 0 chr13 75482050 75482120 -44802192 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 6 1160 227 325 208 45 chr13 75482300 75482483 -44801829 - MLT1L LTR MaLR -87 523 310 6 1160 450 0 0 0 chr13 75482483 75482533 -44801779 + (TAGA)n Simple_repeat Simple_repeat 4 53 0 6 1160 227 325 208 45 chr13 75482533 75482594 -44801718 - MLT1L LTR MaLR -301 309 239 6 1160 2985 138 22 26 chr13 75483888 75484423 -44799889 + Lx LINE L1 6118 6650 -4 6 1160 1098 245 158 12 chr13 75485858 75486188 -44798124 + MTD LTR MaLR 42 419 0 6 1160 267 373 164 10 chr13 75487233 75487428 -44796884 + MLT1K LTR MaLR 137 361 -234 6 1160 518 338 80 75 chr13 75487443 75487933 -44796379 - MLT1D LTR MaLR -11 494 3 6 1160 4312 244 88 24 chr13 75488107 75489315 -44794997 - MMAR1 DNA Mariner 0 1286 2 6 1160 4666 143 112 16 chr13 75489603 75490477 -44793835 + RMER17B LTR ERVK 1 958 0 6 1160 1657 255 78 16 chr13 75490613 75491123 -44793189 + RLTR20A LTR ERVK 13 541 0 6 1160 440 341 124 56 chr13 75491123 75491530 -44792782 - MLT1C LTR MaLR -34 433 1 6 1160 2584 46 71 0 chr13 75492005 75492328 -44791984 + ORR1A1 LTR MaLR 1 346 0 6 1160 180 111 0 0 chr13 75492682 75492709 -44791603 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 6 1160 190 438 39 7 chr13 75493283 75493437 -44790875 + MIRb SINE MIR 76 234 -34 6 1160 396 0 0 0 chr13 75494284 75494328 -44789984 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1160 235 268 102 73 chr13 75495476 75495527 -44788785 + Lx7 LINE L1 7168 7230 -466 6 1160 183 80 0 0 chr13 75495527 75495552 -44788760 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 6 1160 235 268 102 73 chr13 75495552 75495637 -44788675 + Lx7 LINE L1 7231 7308 -388 6 1160 366 333 27 36 chr13 75495959 75496071 -44788241 + RSINE1 SINE B4 55 165 0 6 1160 235 277 0 15 chr13 75496404 75496470 -44787842 - L1M5 LINE L1 -299 5874 5810 6 1160 366 274 118 0 chr13 75496519 75496654 -44787658 + Charlie1a DNA MER1_type 74 224 -1231 6 2 7757 83 8 14 chr13 75496676 75498001 -44786311 - L1_Mus3 LINE L1 -10 6628 5314 6 1161 1630 26 0 0 chr13 75498001 75498193 -44786119 + B2_Mm1a SINE B2 2 193 0 6 1161 7023 108 1 32 chr13 75498193 75498674 -44785638 - L1_Mus3 LINE L1 -570 5313 4853 6 1161 2473 118 7 59 chr13 75498674 75499078 -44785234 + RLTR9A2 LTR ERVK 1 383 0 6 1161 1095 70 14 7 chr13 75499123 75499268 -44785044 + B1_Mm SINE Alu 2 147 0 6 1161 498 17 0 0 chr13 75499567 75499626 -44784686 + (TAAAA)n Simple_repeat Simple_repeat 1 59 0 6 1161 1212 151 73 151 chr13 75499641 75499999 -44784313 + RLTR45-int LTR ERVK 2063 2392 -4852 6 1161 12194 144 49 73 chr13 75500000 75500558 -44783754 + ETnERV2-int LTR ERVK 1381 1945 -5461 1 1161 227 333 0 14 chr13 75500558 75500631 -44783681 + MTC-int LTR MaLR 479 550 -708 2 1161 12194 144 49 73 chr13 75500631 75502227 -44782085 + ETnERV2-int LTR ERVK 1946 3563 -3843 1 1161 5268 68 0 0 chr13 75502227 75502905 -44781407 + L1Md_T LINE L1 5905 6582 0 3 1161 12194 158 58 65 chr13 75502905 75504535 -44779777 + ETnERV2-int LTR ERVK 2491 4089 -1317 1 1161 239 282 106 77 chr13 75504707 75505004 -44779308 + RLTR41 LTR ERV1 113 457 -50 4 1161 673 86 0 0 chr13 75505018 75505111 -44779201 + RMER16-int LTR ERVK 4081 4173 -1233 5 1161 621 282 28 101 chr13 75505122 75505477 -44778835 + ETnERV2-int LTR ERVK 6097 6425 -981 6 1161 1957 100 2 228 chr13 75505758 75506250 -44778062 + RLTR9A2 LTR ERVK 1 381 -2 7 1161 17320 149 28 7 chr13 75506252 75510251 -44774061 - L1VL1 LINE L1 -1025 4852 408 8 1161 416 307 94 29 chr13 75510488 75510659 -44773653 + B4A SINE B4 6 187 -105 9 1161 1912 182 109 3 chr13 75510804 75511179 -44773133 - MTC LTR MaLR -4 417 3 1 1161 573 264 111 25 chr13 75511221 75511419 -44772893 + Lx8 LINE L1 6302 6516 -957 1 1161 208 216 0 73 chr13 75511494 75511604 -44772708 + A-rich Low_complexity Low_complexity 2 103 0 1 1161 465 247 40 57 chr13 75511605 75511781 -44772531 + Charlie1a DNA MER1_type 833 1005 -450 1 1161 24 0 0 0 chr13 75511784 75511808 -44772504 + AT_rich Low_complexity Low_complexity 1 24 0 1 1161 371 243 108 5 chr13 75511871 75512074 -44772238 + Charlie1a DNA MER1_type 1197 1420 -35 1 1161 306 0 0 0 chr13 75512401 75512435 -44771877 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1 1161 552 257 122 10 chr13 75512734 75513029 -44771283 + L1MD LINE L1 2734 3061 -3085 1 1161 338 292 59 47 chr13 75513029 75513062 -44771250 + B4 SINE B4 53 87 -205 1 1161 606 191 87 14 chr13 75513062 75513200 -44771112 + B1_Mus1 SINE Alu 1 148 0 1 1161 202 196 0 38 chr13 75513206 75513259 -44771053 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1 1161 246 179 89 13 chr13 75513261 75513340 -44770972 + L1MD LINE L1 3114 3198 -2948 1 1161 2393 78 105 11 chr13 75513437 75513810 -44770502 + BGLII LTR ERVK 14 421 0 2 1161 242 345 11 11 chr13 75513901 75513912 -44770400 + MTE2b LTR MaLR 1 88 -291 2 1161 414 208 0 0 chr13 75513912 75513989 -44770323 + MT2A LTR ERVL 12 88 -445 2 1161 6341 72 11 9 chr13 75514016 75514794 -44769518 - L1_Mus4 LINE L1 -8 6628 5849 2 1161 3269 53 0 0 chr13 75514794 75515190 -44769122 - MTA_Mm LTR MaLR 0 396 1 2 1161 6341 72 11 9 chr13 75515190 75515267 -44769045 - L1_Mus4 LINE L1 -788 5848 5772 2 1161 1105 280 43 34 chr13 75515267 75515589 -44768723 + MT2A LTR ERVL 74 398 -135 2 1161 280 195 117 0 chr13 75515574 75515606 -44768706 + MLT2C1 LTR ERVL 478 515 -48 2 1161 288 0 0 0 chr13 75515606 75515638 -44768674 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1161 314 91 0 0 chr13 75515638 75515682 -44768630 + MT2A LTR ERVL 490 533 0 2 1161 596 280 162 2 chr13 75515718 75516137 -44768175 + L1MD LINE L1 4321 4806 -1340 1 1161 396 250 31 0 chr13 75517396 75517492 -44766820 + Charlie4a DNA MER1_type 59 157 -351 2 1161 302 309 182 0 chr13 75517527 75517763 -44766549 + Charlie4a DNA MER1_type 223 501 -7 2 1161 184 30 61 0 chr13 75518327 75518360 -44765952 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 2 1161 774 206 7 7 chr13 75518360 75518507 -44765805 - B1_Mur3 SINE Alu 0 149 3 2 1161 351 351 119 34 chr13 75519522 75519699 -44764613 + MamRep38 DNA hAT 2 193 -102 3 1161 189 0 0 0 chr13 75520010 75520031 -44764281 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 3 1161 1159 68 0 0 chr13 75520032 75520179 -44764133 - B1_Mus1 SINE Alu -1 147 1 3 1161 2083 191 100 59 chr13 75520216 75520778 -44763534 + Lx9 LINE L1 6995 7579 -65 3 1161 3103 46 2 0 chr13 75520797 75521190 -44763122 + MTB LTR MaLR 7 400 0 3 1161 197 350 9 72 chr13 75521627 75521738 -44762574 - MIR SINE MIR -118 144 41 3 1161 246 191 0 0 chr13 75522808 75522850 -44761462 - B1F SINE Alu 0 149 108 3 1161 664 301 27 0 chr13 75523254 75523437 -44760875 - B3 SINE B2 -24 192 5 3 1161 268 379 40 8 chr13 75525356 75525481 -44758831 + L2 LINE L2 2712 2840 -579 3 1161 433 254 99 8 chr13 75526506 75526637 -44757675 + ID_B1 SINE B4 82 224 0 3 1161 1896 118 3 63 chr13 75526610 75526927 -44757385 - ORR1A2 LTR MaLR -29 298 1 4 1161 1435 275 55 37 chr13 75528161 75528515 -44755797 - Lx8 LINE L1 -823 6650 6290 4 1161 1666 178 110 0 chr13 75528515 75528870 -44755442 + ORR1B1 LTR MaLR 1 394 0 4 1161 1435 275 55 37 chr13 75528870 75528969 -44755343 - Lx8 LINE L1 -1184 6289 6189 4 1161 268 281 161 58 chr13 75529160 75529315 -44754997 - MLT1I LTR MaLR -151 260 90 4 1161 214 285 154 39 chr13 75529645 75529853 -44754459 - L3 LINE CR1 -1615 2874 2643 4 1161 234 81 0 0 chr13 75530608 75530645 -44753667 + (CAAT)n Simple_repeat Simple_repeat 1 37 0 4 1161 394 319 46 115 chr13 75532094 75532292 -44752020 + B4 SINE B4 9 199 -93 4 1161 224 59 29 0 chr13 75532292 75532326 -44751986 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 4 1161 394 319 46 115 chr13 75532326 75532432 -44751880 + B4 SINE B4 200 292 0 4 1161 240 342 13 0 chr13 75532536 75532615 -44751697 + ID4_ SINE ID 2 81 -2 4 1161 23240 62 3 1 chr13 75532915 75536640 -44747672 - L1Md_F2 LINE L1 -5 6577 2850 4 1161 1257 303 36 23 chr13 75536641 75537029 -44747283 + Lx7 LINE L1 6197 6589 -1107 5 1161 5765 97 24 12 chr13 75537031 75537753 -44746559 + RLTR13D6 LTR ERVK 1 732 -170 5 1161 239 71 24 0 chr13 75537753 75537795 -44746517 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 1161 5765 97 24 12 chr13 75537795 75537918 -44746394 + RLTR13D6 LTR ERVK 733 855 -47 5 1161 2486 272 42 48 chr13 75537937 75537975 -44746337 + Lx7 LINE L1 6584 6621 -1075 5 1161 2890 67 15 13 chr13 75537975 75538370 -44745942 - MTA_Mm LTR MaLR 0 396 1 5 1161 2486 272 42 48 chr13 75538370 75539085 -44745227 + Lx7 LINE L1 6622 7333 -363 5 1161 238 264 111 58 chr13 75539067 75539256 -44745056 + Lx7 LINE L1 7481 7679 -17 5 1161 23 33 0 0 chr13 75539261 75539291 -44745021 + AT_rich Low_complexity Low_complexity 1 30 0 5 1161 2784 38 14 3 chr13 75540081 75540427 -44743885 + L1Md_F3 LINE L1 6235 6584 0 5 1161 354 322 77 28 chr13 75540934 75541116 -44743196 - MIR3 SINE MIR -2 206 16 5 1161 16744 161 18 34 chr13 75541425 75544972 -44739340 + L1VL4 LINE L1 549 4101 -1785 5 1161 624 26 0 0 chr13 75544972 75545049 -44739263 - MTA_Mm LTR MaLR -319 77 1 5 1161 16744 161 18 34 chr13 75545049 75545563 -44738749 + L1VL4 LINE L1 4102 4618 -1268 5 1161 4670 168 70 11 chr13 75545562 75547006 -44737306 + L1Md_F LINE L1 98 1366 -4517 5 1161 8174 45 1 5 chr13 75547005 75548656 -44735656 - L1Md_F2 LINE L1 0 6582 4939 6 1161 5243 92 1 5 chr13 75548631 75549403 -44734909 + L1Md_F LINE L1 1356 2124 -3759 5 1161 541 80 0 11 chr13 75549403 75549491 -44734821 + L1_Mus2 LINE L1 6480 6566 0 6 1161 309 300 26 26 chr13 75549531 75549685 -44734627 + L1MA6 LINE L1 5784 5937 -363 6 1161 25 51 0 0 chr13 75550048 75550087 -44734225 + AT_rich Low_complexity Low_complexity 1 39 0 6 1161 339 278 293 0 chr13 75550660 75550799 -44733513 + B3 SINE B2 2 180 -36 6 1161 310 289 84 21 chr13 75550806 75550997 -44733315 + MamRep4096 DNA hAT? 53 255 -171 6 1161 3439 220 32 84 chr13 75551569 75552421 -44731891 - Lx LINE L1 -6 6648 5855 6 1161 5031 110 92 27 chr13 75552421 75553272 -44731040 + RMER17A2 LTR ERVK 1 906 0 6 1161 3439 143 7 20 chr13 75553272 75553679 -44730633 - Lx LINE L1 -800 5854 5447 6 1161 7804 70 101 1 chr13 75553674 75554944 -44729368 - L1Md_F2 LINE L1 -2 6580 5091 6 1161 7320 90 3 13 chr13 75554962 75556528 -44727784 - L1_Mus2 LINE L1 0 6566 5017 6 1161 1068 125 0 0 chr13 75557294 75557446 -44726866 + B2_Mm2 SINE B2 10 161 -34 7 1161 225 0 0 0 chr13 75557446 75557471 -44726841 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 7 1161 21 36 0 0 chr13 75557864 75557892 -44726420 + AT_rich Low_complexity Low_complexity 1 28 0 7 1161 1042 254 14 5 chr13 75559163 75559377 -44724935 + B4 SINE B4 2 217 -75 7 1161 3971 190 4 19 chr13 75559378 75560082 -44724230 + Lx5 LINE L1 6353 7046 -4 7 1161 440 237 0 0 chr13 75560114 75560190 -44724122 + B4 SINE B4 215 290 -2 7 1161 276 205 61 102 chr13 75560254 75560352 -44723960 - RMER16 LTR ERVK -50 483 390 7 1161 798 196 35 20 chr13 75560357 75560555 -44723757 - Lx9 LINE L1 -528 7116 6916 7 1161 1334 185 48 33 chr13 75560556 75560953 -44723359 + Lx9 LINE L1 7241 7643 -1 7 1161 9540 82 27 9 chr13 75561199 75563415 -44720897 + Lx3_Mus LINE L1 4742 7004 -5 7 1161 186 133 0 0 chr13 75563417 75563447 -44720865 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 7 1161 492 192 0 0 chr13 75563461 75563560 -44720752 + (CA)n Simple_repeat Simple_repeat 2 100 0 7 1161 21 0 0 0 chr13 75564439 75564460 -44719852 + AT_rich Low_complexity Low_complexity 1 21 0 8 1161 271 309 70 43 chr13 75565189 75565304 -44719008 + MLT1N2 LTR MaLR 404 521 -41 8 1161 495 0 0 0 chr13 75565318 75565373 -44718939 + (CAATG)n Simple_repeat Simple_repeat 4 58 0 8 1161 226 67 44 0 chr13 75565375 75565420 -44718892 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 8 1161 1081 303 95 110 chr13 75566082 75566893 -44717419 + MER63C DNA AcHobo 6 804 -126 8 1161 23 33 0 0 chr13 75567379 75567409 -44716903 + AT_rich Low_complexity Low_complexity 1 30 0 8 1161 744 58 461 0 chr13 75567449 75567616 -44716696 + L1_Mus1 LINE L1 6321 6564 -2 8 1161 543 102 102 0 chr13 75567591 75567699 -44716613 + MusHAL1 LINE L1 678 796 -1916 8 1161 265 169 169 0 chr13 75567691 75567762 -44716550 + L1_Mm LINE L1 2045 2127 -3756 8 1161 4690 65 10 0 chr13 75567826 75568600 -44715712 - MusHAL1 LINE L1 -1993 1360 578 8 1161 3060 141 15 13 chr13 75568599 75569146 -44715166 - L1VL2 LINE L1 -5715 620 73 9 1161 276 282 154 0 chr13 75569368 75569446 -44714866 + L2b LINE L2 3271 3360 -15 9 1161 357 314 46 6 chr13 75569876 75569893 -44714419 + Lx8 LINE L1 5474 5490 -822 9 1161 216 0 0 0 chr13 75569893 75569917 -44714395 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 9 1161 926 274 80 33 chr13 75569917 75570428 -44713884 + Lx8 LINE L1 5444 5986 -1487 9 1161 1963 161 9 0 chr13 75570674 75570990 -44713322 + ORR1A2 LTR MaLR 1 319 -8 9 1161 766 266 5 24 chr13 75571023 75571235 -44713077 + Lx8 LINE L1 6359 6566 -907 9 1161 989 218 90 52 chr13 75571247 75571695 -44712617 + RLTR20C LTR ERVK 3 578 0 9 1161 2367 272 76 25 chr13 75571707 75572549 -44711763 + Lx8 LINE L1 6583 7467 -6 9 1161 1403 238 50 26 chr13 75572749 75573083 -44711229 - MTD LTR MaLR -99 320 1 9 1161 394 262 11 19 chr13 75573088 75573225 -44711087 - MTD-int LTR MaLR -5 1253 1153 9 1161 1086 276 122 33 chr13 75573226 75574724 -44709588 + L1MB7 LINE L1 4349 5979 -205 9 1161 4928 50 0 0 chr13 75574766 75575361 -44708951 + L1Md_T LINE L1 5987 6581 -1 9 1161 22 0 0 0 chr13 75575438 75575460 -44708852 + AT_rich Low_complexity Low_complexity 1 22 0 9 1161 21 36 0 0 chr13 75575692 75575720 -44708592 + AT_rich Low_complexity Low_complexity 1 28 0 1 1161 2751 126 9 61 chr13 75575877 75576335 -44707977 + RLTR41 LTR ERV1 1 434 -12 1 1161 446 329 56 86 chr13 75577464 75578728 -44705584 + MuLV-int LTR ERV1 1289 2448 -5108 1 1161 402 297 62 29 chr13 75578770 75579079 -44705233 + MuRRS4-int LTR ERV1 2759 3038 -2025 1 1161 189 0 0 0 chr13 75579079 75579100 -44705212 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1161 402 291 64 30 chr13 75579100 75579125 -44705187 + MuRRS4-int LTR ERV1 3039 3065 -1998 1 1161 1316 158 25 80 chr13 75579153 75579477 -44704835 + RMER17A-int LTR ERVK 1131 1436 -292 1 1161 2743 61 55 23 chr13 75579512 75579896 -44704416 - MTA_Mm LTR MaLR 0 396 1 1 1161 2865 87 37 5 chr13 75579896 75580324 -44703988 - MTA_Mm-int LTR MaLR 0 1098 657 1 1161 2127 210 42 109 chr13 75580342 75580604 -44703708 + RMER17B LTR ERVK 170 431 -527 1 1161 221 0 0 33 chr13 75580604 75580634 -44703678 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1161 2127 239 34 128 chr13 75580634 75581258 -44703054 + RMER17B LTR ERVK 339 860 0 1 1161 398 291 18 18 chr13 75581276 75581444 -44702868 + (CATA)n Simple_repeat Simple_repeat 4 171 0 1 1161 424 308 17 17 chr13 75581466 75581638 -44702674 + (CA)n Simple_repeat Simple_repeat 1 172 0 1 1161 330 27 79 26 chr13 75582687 75582763 -44701549 + (TTTTTG)n Simple_repeat Simple_repeat 3 82 0 1 1161 1058 111 0 0 chr13 75582765 75582909 -44701403 - B1_Mus2 SINE Alu -3 144 1 1 1161 519 321 7 22 chr13 75583133 75583270 -44701042 + RSINE1 SINE B4 4 138 -27 1 1161 1200 25 19 0 chr13 75583276 75583436 -44700876 + (TAGA)n Simple_repeat Simple_repeat 1 163 0 1 1161 22 70 0 0 chr13 75583503 75583546 -44700766 + AT_rich Low_complexity Low_complexity 1 43 0 1 1161 315 0 0 0 chr13 75583651 75583686 -44700626 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1161 191 330 64 9 chr13 75583955 75584065 -44700247 - MIR3 SINE MIR -15 193 78 1 1161 345 244 10 72 chr13 75584364 75584461 -44699851 + B4A SINE B4 2 92 -200 1 1161 207 0 0 0 chr13 75584585 75584608 -44699704 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1161 532 188 374 7 chr13 75584688 75584843 -44699469 - URR1A DNA MER1_type -14 212 1 1 1161 21 57 0 0 chr13 75584874 75584909 -44699403 + AT_rich Low_complexity Low_complexity 1 35 0 1 1161 852 263 138 23 chr13 75584920 75585432 -44698880 + MT2A LTR ERVL 1 483 -50 1 1161 706 232 71 17 chr13 75585491 75585674 -44698638 + B3 SINE B2 5 192 -6 1 1161 21 0 0 0 chr13 75585816 75585837 -44698475 + AT_rich Low_complexity Low_complexity 1 21 0 1 1161 887 241 90 49 chr13 75586236 75586581 -44697731 + RLTR10D LTR ERVK 1 359 0 1 1161 467 205 18 0 chr13 75586628 75586740 -44697572 + IAP-d-int LTR ERVK 22 135 -6407 1 1161 1169 219 83 0 chr13 75586736 75587038 -44697274 + IAP-d-int LTR ERVK 67 393 -6149 1 1161 8908 282 33 25 chr13 75587027 75590992 -44693320 + IAP-d-int LTR ERVK 1801 5800 -742 1 1161 776 208 6 0 chr13 75591010 75591183 -44693129 + IAP-d-int LTR ERVK 5910 6083 -459 1 1161 1445 213 17 22 chr13 75591178 75591533 -44692779 + IAP-d-int LTR ERVK 6190 6542 0 1 1161 927 242 44 53 chr13 75591533 75591888 -44692424 + RLTR10D LTR ERVK 1 409 -2 1 1161 192 179 0 0 chr13 75592783 75592822 -44691490 + GA-rich Low_complexity Low_complexity 2 40 0 1 1161 1140 194 149 73 chr13 75593177 75593359 -44690953 + ORR1C2 LTR MaLR 3 177 -207 1 1161 456 19 0 0 chr13 75593359 75593412 -44690900 + (TC)n Simple_repeat Simple_repeat 1 53 0 1 1161 1140 194 149 73 chr13 75593412 75593584 -44690728 + ORR1C2 LTR MaLR 178 383 -1 1 1161 307 275 257 23 chr13 75593891 75594382 -44689930 + L1MC3 LINE L1 7048 7652 -133 1 1161 486 315 46 0 chr13 75594423 75594553 -44689759 - RSINE1 SINE B4 -1 164 29 1 1161 232 279 125 0 chr13 75594560 75594664 -44689648 + L1MC3 LINE L1 7647 7763 -22 1 1161 1249 107 11 0 chr13 75594691 75594868 -44689444 - B2_Mm1t SINE B2 -14 179 1 1 1161 1340 206 65 18 chr13 75595350 75595691 -44688621 - RMER17C LTR ERVK -5 405 49 1 1161 1346 158 25 44 chr13 75595690 75596007 -44688305 + RMER17C LTR ERVK 92 402 -8 1 1161 785 209 90 0 chr13 75596021 75596222 -44688090 - Lx9 LINE L1 -111 7533 7315 1 1161 675 203 50 158 chr13 75596228 75596550 -44687762 + Lx9 LINE L1 7011 7297 -347 1 1161 240 191 0 0 chr13 75596838 75596880 -44687432 + L2b LINE L2 3026 3067 -308 1 1161 307 320 140 97 chr13 75597763 75598113 -44686199 - LTR78 LTR ERV1 -937 367 3 1 1161 308 338 14 50 chr13 75598125 75598265 -44686047 + L2b LINE L2 3239 3373 -2 1 1161 540 88 29 10 chr13 75599182 75599285 -44685027 + Lx9 LINE L1 7525 7629 -15 1 1161 180 77 0 0 chr13 75599519 75599545 -44684767 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1161 652 236 48 7 chr13 75599866 75600004 -44684308 + MTD LTR MaLR 7 150 -269 1 1161 758 205 59 101 chr13 75600004 75600311 -44684001 - RMER17C LTR ERVK 0 410 114 1 1161 1923 192 54 85 chr13 75600311 75600771 -44683541 + RLTR41 LTR ERV1 1 446 0 1 1161 758 217 34 97 chr13 75600771 75600891 -44683421 - RMER17C LTR ERVK -259 151 42 1 1161 3406 30 2 0 chr13 75600891 75601286 -44683026 + MTA_Mm LTR MaLR 1 396 0 1 1161 546 220 26 96 chr13 75601286 75601326 -44682986 - RMER17C LTR ERVK -369 41 2 1 1161 280 227 15 15 chr13 75601329 75601396 -44682916 + MTD LTR MaLR 170 236 -185 1 1161 1230 47 5 140 chr13 75601397 75601619 -44682693 + L1_Mus4 LINE L1 5648 5839 -797 1 1161 662 219 163 5 chr13 75601619 75601803 -44682509 + MTD LTR MaLR 207 419 0 1 1161 388 310 17 26 chr13 75602136 75602252 -44682060 + PB1D10 SINE Alu 1 115 -2 1 1161 545 256 29 36 chr13 75602257 75602395 -44681917 + RSINE1 SINE B4 17 153 -12 1 1161 225 351 18 9 chr13 75603137 75603249 -44681063 + PB1D7 SINE Alu 1 113 -7 1 1161 242 29 0 28 chr13 75603703 75603739 -44680573 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1161 495 233 0 0 chr13 75604050 75604200 -44680112 + CT-rich Low_complexity Low_complexity 2 151 0 1 1161 2104 216 147 4 chr13 75604307 75604805 -44679507 - RMER4B LTR ERVK 0 585 17 1 1161 387 0 0 0 chr13 75604854 75604897 -44679415 + (T)n Simple_repeat Simple_repeat 1 43 0 1 1161 626 37 0 12 chr13 75605144 75605226 -44679086 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 1 1161 291 157 0 0 chr13 75605231 75605282 -44679030 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1161 681 313 94 101 chr13 75605628 75606094 -44678218 + MLT1G1 LTR MaLR 79 541 -38 1 1161 362 171 116 9 chr13 75607136 75607248 -44677064 + Lx7 LINE L1 7569 7692 -4 1 1161 434 320 113 11 chr13 75607513 75607690 -44676622 + B3A SINE B2 4 198 0 1 1161 366 205 0 0 chr13 75607998 75608076 -44676236 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 1 1161 2536 163 101 14 chr13 75608367 75608883 -44675429 - RLTR31_Mm LTR ERVK 0 561 1 1 1161 412 179 60 0 chr13 75609121 75609205 -44675107 - L1_Mur1 LINE L1 -714 5172 5084 1 1161 2617 110 5 153 chr13 75609205 75609819 -44674493 - RMER17A LTR ERVK 0 751 229 1 1161 2085 111 7 3 chr13 75609817 75610115 -44674197 - ORR1A2 LTR MaLR -28 299 1 1 1161 516 279 53 85 chr13 75610131 75610472 -44673840 + L1MC3 LINE L1 5621 5950 -1835 1 1161 1111 316 44 37 chr13 75610553 75611072 -44673240 + Lx8 LINE L1 6922 7444 -29 1 1161 253 309 24 8 chr13 75611111 75611235 -44673077 + L1MC3 LINE L1 5971 6096 -237 1 1161 4664 40 40 0 chr13 75611264 75611837 -44672475 - L1Md_T LINE L1 0 6582 5987 1 1161 4368 38 0 7 chr13 75611837 75612414 -44671898 - L1Md_A LINE L1 -5527 1197 625 1 1161 392 289 142 23 chr13 75612438 75612831 -44671481 + L1MC3 LINE L1 6177 6616 -1169 1 1161 618 98 137 0 chr13 75612905 75613007 -44671305 - MTB_Mm LTR MaLR -291 116 1 1 1161 232 336 100 24 chr13 75613026 75613355 -44670957 + L1MC3 LINE L1 7025 7378 -407 1 1161 894 196 117 63 chr13 75613385 75613701 -44670611 - Lx7 LINE L1 0 7696 7364 1 1161 180 0 0 0 chr13 75613725 75613745 -44670567 + (CA)n Simple_repeat Simple_repeat 2 21 0 1 1161 674 252 45 10 chr13 75613784 75613984 -44670328 - Lx7 LINE L1 -328 7368 7162 1 1161 1919 144 85 17 chr13 75613990 75614156 -44670156 - RMER10B LTR ERVL -20 378 218 1 1161 255 31 0 0 chr13 75614156 75614188 -44670124 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1161 1919 144 85 17 chr13 75614188 75614373 -44669939 - RMER10B LTR ERVL -181 217 5 1 1161 722 216 36 6 chr13 75614375 75614543 -44669769 - Lx7 LINE L1 -541 7155 6983 1 1161 2945 195 51 23 chr13 75614568 75615254 -44669058 - RMER13B LTR ERVK -16 892 188 1 1161 3955 106 43 78 chr13 75615254 75616020 -44668292 - RMER17A LTR ERVK 0 751 13 1 1161 788 237 22 119 chr13 75615993 75616261 -44668051 - RMER13B LTR ERVK -666 242 1 1 1161 307 75 0 0 chr13 75616262 75616302 -44668010 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1161 681 158 0 0 chr13 75616303 75616423 -44667889 + (TA)n Simple_repeat Simple_repeat 2 121 0 1 1161 1671 54 0 0 chr13 75616430 75616653 -44667659 - L1_Mus2 LINE L1 -620 5946 5724 1 1161 16527 122 14 6 chr13 75616867 75617337 -44666975 - L1_Mm LINE L1 -1817 4066 3593 1 1161 2867 35 9 11 chr13 75617337 75617684 -44666628 - ORR1A0 LTR MaLR 0 346 1 1 1161 16527 122 14 6 chr13 75617684 75620044 -44664268 - L1_Mm LINE L1 -2291 3592 1214 1 1161 1384 203 119 16 chr13 75620052 75620498 -44663814 + Lx7 LINE L1 1469 1960 -3920 1 1161 1062 198 50 68 chr13 75620503 75620859 -44663453 - RLTRETN_Mm LTR ERVK 0 409 6 1 1161 333 108 28 84 chr13 75620873 75620944 -44663368 - MMETn-int LTR ERVK 0 7406 7340 1 1161 417 160 357 76 chr13 75620944 75621154 -44663158 - RLTR13D6 LTR ERVK -356 546 278 1 1161 5382 115 26 2 chr13 75621165 75621965 -44662347 - MMETn-int LTR ERVK -366 7040 6222 1 1161 4404 171 26 42 chr13 75622093 75623815 -44660497 - MMETn-int LTR ERVK -3321 4085 2356 1 1161 2498 129 34 50 chr13 75624042 75624694 -44659618 - MMETn-int LTR ERVK -2664 2180 1731 1 1161 5394 132 31 98 chr13 75624717 75625928 -44658384 - MMETn-int LTR ERVK -3714 1130 2 1 1161 837 203 30 148 chr13 75625931 75626296 -44658016 - RLTRETN_Mm LTR ERVK 0 322 1 1 1161 4935 185 47 37 chr13 75626301 75627070 -44657242 + Lx7 LINE L1 1965 2735 -3145 1 1161 189 0 0 0 chr13 75627070 75627091 -44657221 + (TAAAA)n Simple_repeat Simple_repeat 3 23 0 1 1161 4935 185 47 37 chr13 75627091 75627672 -44656640 + Lx7 LINE L1 2736 3328 -2552 1 1161 1274 214 108 11 chr13 75627654 75628023 -44656289 + Lx7 LINE L1 4803 5207 -673 1 1161 551 106 0 0 chr13 75628023 75628108 -44656204 + Lx7 LINE L1 5333 5417 -463 1 1161 621 205 0 17 chr13 75628108 75628227 -44656085 + B1_Mur4 SINE Alu 2 118 -32 1 1161 469 30 30 0 chr13 75628230 75628297 -44656015 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1161 818 119 0 7 chr13 75628338 75628482 -44655830 + (GGAA)n Simple_repeat Simple_repeat 3 145 0 1 145 576 241 0 0 chr13 75628482 75628615 -44655697 + Lx7 LINE L1 5413 5545 -335 1 1162 25225 142 13 14 chr13 75628622 75634697 -44649615 + L1_Mus4 LINE L1 562 6631 -5 1 1162 6144 219 89 49 chr13 75634697 75634753 -44649559 + Lx7 LINE L1 5796 5845 -1851 1 1162 2343 204 25 113 chr13 75634753 75635423 -44648889 + RMER19C LTR ERVK 1 611 0 1 1162 6144 219 89 49 chr13 75635423 75635923 -44648389 + Lx7 LINE L1 5846 6369 -1327 1 1162 2769 82 25 13 chr13 75635923 75636318 -44647994 - MTB LTR MaLR 0 400 1 1 1162 6144 219 89 49 chr13 75636318 75637333 -44646979 + Lx7 LINE L1 6370 7429 -267 1 1162 387 0 0 0 chr13 75637333 75637376 -44646936 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1162 6144 219 89 49 chr13 75637376 75637511 -44646801 + Lx7 LINE L1 7430 7572 -124 1 1162 189 0 0 0 chr13 75637511 75637532 -44646780 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1162 6144 219 89 49 chr13 75637532 75637650 -44646662 + Lx7 LINE L1 7573 7696 0 1 1162 1017 85 0 0 chr13 75637831 75637972 -44646340 + (TC)n Simple_repeat Simple_repeat 2 142 0 1 1162 488 270 16 0 chr13 75638023 75638149 -44646163 + Lx8 LINE L1 6580 6707 -766 1 1162 1270 342 55 22 chr13 75638166 75638835 -44645477 + Lx8 LINE L1 6772 7462 -11 1 1162 550 272 0 0 chr13 75638868 75638982 -44645330 + RSINE1 SINE B4 4 117 -48 1 1162 354 127 0 0 chr13 75639005 75639076 -44645236 + (GA)n Simple_repeat Simple_repeat 2 72 0 1 1162 578 272 128 0 chr13 75639304 75639499 -44644813 - ID_B1 SINE B4 -2 222 3 1 1162 2565 62 20 20 chr13 75640662 75641008 -44643304 - ORR1A1 LTR MaLR 0 346 1 1 1162 350 274 40 8 chr13 75642694 75642819 -44641493 + GA-rich Low_complexity Low_complexity 1 129 0 1 1162 2250 89 3 0 chr13 75643624 75643939 -44640373 - L1_Mus4 LINE L1 -235 5648 5333 1 1162 3258 45 34 2 chr13 75643938 75644383 -44639929 + L1_Mus4 LINE L1 5626 6084 -552 1 1162 3567 149 41 33 chr13 75644383 75645020 -44639292 - RLTR26 LTR ERVK 0 642 1 1 1162 3546 94 37 0 chr13 75645020 75645530 -44638782 + L1_Mus4 LINE L1 6079 6607 -29 2 1162 306 322 51 37 chr13 75645568 75645784 -44638528 + Lx8 LINE L1 6063 6281 -1192 2 1162 546 274 15 7 chr13 75645789 75645925 -44638387 + B3A SINE B2 27 163 -35 2 1162 2318 222 154 11 chr13 75646004 75646704 -44637608 + Lx8 LINE L1 6253 7052 -421 2 1162 27 49 0 0 chr13 75647528 75647569 -44636743 + AT_rich Low_complexity Low_complexity 1 41 0 2 1162 655 300 127 27 chr13 75647576 75647946 -44636366 + Lx8 LINE L1 7055 7461 -12 2 1162 23 33 0 0 chr13 75648240 75648270 -44636042 + AT_rich Low_complexity Low_complexity 1 30 0 2 1162 4415 129 9 11 chr13 75648566 75649321 -44634991 + Lx2 LINE L1 5891 6644 -353 2 1162 1346 127 0 14 chr13 75649323 75649546 -44634766 + Lx2 LINE L1 6778 6997 0 2 1162 7963 38 0 2 chr13 75650123 75651140 -44633172 - L1Md_F2 LINE L1 -12 6570 5551 2 1162 405 305 34 6 chr13 75651153 75651328 -44632984 - MamRep4096 DNA hAT? -133 293 114 2 1162 360 271 293 0 chr13 75651390 75651529 -44632783 - B3 SINE B2 -36 180 2 2 1162 261 0 0 0 chr13 75652059 75652088 -44632224 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1162 222 118 0 0 chr13 75653945 75653979 -44630333 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1162 7930 28 10 0 chr13 75654054 75655385 -44628927 - L1Md_T LINE L1 0 6582 5244 2 1162 36 0 0 0 chr13 75656407 75656443 -44627869 + AT_rich Low_complexity Low_complexity 1 36 0 2 1162 429 70 0 0 chr13 75657169 75657226 -44627086 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1162 324 0 0 0 chr13 75657352 75657388 -44626924 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1162 183 80 0 0 chr13 75657964 75657989 -44626323 + (CAT)n Simple_repeat Simple_repeat 2 26 0 2 1162 401 321 36 22 chr13 75658000 75658137 -44626175 + B1F SINE Alu 1 139 -10 2 1162 202 217 0 28 chr13 75658137 75658208 -44626104 + GA-rich Low_complexity Low_complexity 4 72 0 2 1162 269 307 13 0 chr13 75659444 75659519 -44624793 + ID4_ SINE ID 8 83 0 2 1162 351 319 18 0 chr13 75659652 75659765 -44624547 + PB1D10 SINE Alu 3 117 0 2 1162 264 59 0 0 chr13 75659769 75659803 -44624509 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 2 1162 357 24 0 0 chr13 75660502 75660544 -44623768 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 2 1162 320 0 0 24 chr13 75663456 75663497 -44620815 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 2 1162 324 291 180 11 chr13 75663694 75663955 -44620357 + L1ME1 LINE L1 4973 5277 -869 2 1162 263 263 51 29 chr13 75664134 75664271 -44620041 + L1ME1 LINE L1 5413 5552 -627 2 1162 1380 312 62 28 chr13 75664302 75665228 -44619084 + L1_Rod LINE L1 4768 5728 -119 2 1162 357 62 0 0 chr13 75665228 75665276 -44619036 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1162 1380 312 62 28 chr13 75665276 75665383 -44618929 + L1_Rod LINE L1 5729 5835 -12 2 1162 671 294 106 17 chr13 75665631 75666092 -44618220 + L1ME1 LINE L1 5570 6071 -108 2 1162 317 171 57 0 chr13 75666636 75666706 -44617606 - MTE2a LTR MaLR -304 75 2 2 1162 2299 180 5 2 chr13 75666708 75667125 -44617187 - MTC LTR MaLR -3 418 1 2 1162 434 280 0 0 chr13 75667135 75667242 -44617070 + MIR SINE MIR 118 224 -38 2 1162 209 390 77 35 chr13 75667530 75667700 -44616612 - MIRb SINE MIR -8 260 84 2 1162 1009 242 127 86 chr13 75667896 75668257 -44616055 - MTEa LTR MaLR -1 378 3 2 1162 233 258 50 61 chr13 75668356 75668455 -44615857 + MER5A1 DNA MER1_type 12 109 -57 2 1162 432 0 0 0 chr13 75668862 75668910 -44615402 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1162 211 324 45 97 chr13 75669767 75669921 -44614391 - L2a LINE L2 -2 3424 3279 2 1162 216 0 0 0 chr13 75670185 75670209 -44614103 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1162 7451 64 1 0 chr13 75670211 75671209 -44613103 + L1Md_F2 LINE L1 4587 5585 -298 2 1162 8141 47 3 0 chr13 75671210 75672200 -44612112 + L1Md_F2 LINE L1 5587 6579 -3 2 1162 11204 73 4 16 chr13 75672200 75674176 -44610136 - L1Md_Gf LINE L1 -3037 2849 799 2 1162 7223 138 135 7 chr13 75674199 75675633 -44608679 - ORR1A2-int LTR MaLR -345 1618 1 2 1162 2439 92 3 3 chr13 75675633 75675960 -44608352 - ORR1A2 LTR MaLR 0 327 1 2 1162 402 388 107 11 chr13 75675994 75676257 -44608055 - B4A SINE B4 -4 288 1 2 1162 587 313 0 18 chr13 75676830 75676996 -44607316 + RSINE1 SINE B4 3 165 0 2 1162 336 164 0 0 chr13 75680656 75680723 -44603589 + T-rich Low_complexity Low_complexity 1 67 0 2 1162 225 290 16 0 chr13 75680728 75680790 -44603522 + MIR SINE MIR 127 189 -73 2 1162 244 300 110 30 chr13 75682308 75682487 -44601825 + MIRc SINE MIR 5 207 -1 2 1162 436 211 126 20 chr13 75683273 75683391 -44600921 + B1_Mur4 SINE Alu 3 143 -7 2 1162 1258 63 0 17 chr13 75683476 75683655 -44600657 + (GAA)n Simple_repeat Simple_repeat 2 177 0 2 1162 302 320 38 46 chr13 75683742 75683794 -44600518 - MIRc SINE MIR -72 196 143 2 1162 1948 105 102 23 chr13 75683794 75684097 -44600215 + ORR1A2 LTR MaLR 1 327 0 2 1162 302 320 38 46 chr13 75684097 75684175 -44600137 - MIRc SINE MIR -126 142 67 2 1162 305 325 0 0 chr13 75684196 75684276 -44600036 + ID4_ SINE ID 4 83 0 2 1162 597 100 0 0 chr13 75684684 75684774 -44599538 + (CA)n Simple_repeat Simple_repeat 2 91 0 2 1162 1227 28 7 0 chr13 75685660 75685805 -44598507 - B1_Mus2 SINE Alu -1 146 1 2 1162 1901 38 38 4 chr13 75686694 75686932 -44597380 - L1Md_F3 LINE L1 0 6584 6339 2 1162 2562 101 36 3 chr13 75687299 75687686 -44596626 - L1_Mus3 LINE L1 -6 6632 6233 2 1162 630 248 0 42 chr13 75688876 75689019 -44595293 + B1_Mur3 SINE Alu 2 138 -11 2 1162 180 0 0 0 chr13 75689022 75689042 -44595270 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 2 1162 21 57 0 0 chr13 75689513 75689548 -44594764 + AT_rich Low_complexity Low_complexity 1 35 0 2 1162 342 115 0 0 chr13 75689587 75689639 -44594673 + (AGGGGG)n Simple_repeat Simple_repeat 6 57 0 2 1162 208 246 0 0 chr13 75689639 75689696 -44594616 + (CAGAGA)n Simple_repeat Simple_repeat 1 57 0 2 1162 476 216 0 0 chr13 75689700 75689788 -44594524 + B1_Mur1 SINE Alu 43 130 -19 2 1162 221 267 26 13 chr13 75690117 75690193 -44594119 + CT-rich Low_complexity Low_complexity 1 77 0 2 1162 23 54 0 0 chr13 75691057 75691094 -44593218 + AT_rich Low_complexity Low_complexity 1 37 0 2 1162 403 298 54 70 chr13 75692337 75692579 -44591733 - MIR SINE MIR -11 251 14 2 1162 298 276 19 19 chr13 75693723 75693798 -44590514 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 2 1162 387 0 0 0 chr13 75693798 75693841 -44590471 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2 1162 298 276 19 19 chr13 75693841 75693872 -44590440 + (CATATA)n Simple_repeat Simple_repeat 6 36 0 2 1162 1210 167 60 19 chr13 75693875 75694214 -44590098 - MTC LTR MaLR -5 414 3 2 1162 224 149 0 21 chr13 75694710 75694758 -44589554 + (CCA)n Simple_repeat Simple_repeat 3 49 0 2 1162 260 282 23 12 chr13 75695047 75695133 -44589179 - MIR3 SINE MIR -9 199 113 2 1162 470 272 183 24 chr13 75695514 75695804 -44588508 + L1MC4 LINE L1 1182 1517 -4698 2 1162 293 292 38 8 chr13 75695916 75696047 -44588265 + L1MC4 LINE L1 1750 1884 -4331 2 1162 187 305 31 21 chr13 75696091 75696188 -44588124 - MIR SINE MIR -98 164 67 2 1162 316 309 65 83 chr13 75696243 75696472 -44587840 + L1MC4a LINE L1 5642 5866 -2016 2 1162 203 121 51 17 chr13 75696699 75696758 -44587554 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 1162 3134 170 30 0 chr13 75696758 75697328 -44586984 - Lx LINE L1 -16 6638 6052 2 1162 3767 127 24 3 chr13 75697330 75698162 -44586150 + Lx LINE L1 5218 6067 -587 2 1162 29154 131 9 27 chr13 75698569 75699990 -44584322 + L1_Mus1 LINE L1 677 2025 -3858 2 1162 2916 42 0 8 chr13 75699990 75700350 -44583962 + L1Md_F2 LINE L1 6226 6582 0 2 1162 29154 98 14 7 chr13 75700350 75704874 -44579438 + L1_Mus1 LINE L1 2026 6566 -1 2 1162 3638 30 14 0 chr13 75705205 75705642 -44578670 + L1Md_F3 LINE L1 6140 6582 -2 2 1162 414 0 0 0 chr13 75705683 75705729 -44578583 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1162 1401 302 54 26 chr13 75707566 75708212 -44576100 + RodERV21-int LTR ERV1 4223 4886 -105 2 1162 9758 82 15 8 chr13 75708386 75709478 -44574834 - Lx3_Mus LINE L1 0 7009 5906 2 1162 317 75 19 0 chr13 75709478 75709531 -44574781 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 2 1162 9758 82 15 8 chr13 75709531 75709835 -44574477 - Lx3_Mus LINE L1 -1104 5905 5603 2 1162 186 189 0 0 chr13 75709913 75709950 -44574362 + CT-rich Low_complexity Low_complexity 2 38 0 2 1162 3724 60 16 6 chr13 75709950 75710437 -44573875 - L1Md_F2 LINE L1 -1 6581 6090 2 1162 1074 58 0 0 chr13 75710439 75710577 -44573735 + (TTC)n Simple_repeat Simple_repeat 3 140 0 2 1162 23 0 0 0 chr13 75711822 75711845 -44572467 + AT_rich Low_complexity Low_complexity 1 23 0 2 1162 1280 183 57 53 chr13 75712708 75712991 -44571321 + MERVK26-int LTR ERVK 2 285 -6634 2 1162 8904 6 0 3 chr13 75712992 75714044 -44570268 + L1Md_A LINE L1 4538 5586 -297 2 1162 8828 15 0 0 chr13 75714044 75715040 -44569272 + L1Md_A LINE L1 5587 6582 0 2 1162 2358 164 12 7 chr13 75715068 75715493 -44568819 + MERVK26-int LTR ERVK 274 700 -6219 2 1162 925 296 135 3 chr13 75715676 75715994 -44568318 + MLT2D LTR ERVL 1 360 -54 2 1162 207 213 21 0 chr13 75716065 75716112 -44568200 + (TATG)n Simple_repeat Simple_repeat 3 50 0 2 1162 396 0 0 0 chr13 75716115 75716159 -44568153 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1162 705 273 168 4 chr13 75716159 75716391 -44567921 + MTEa LTR MaLR 1 270 -109 2 1162 813 259 121 7 chr13 75717263 75717431 -44566881 - Lx6 LINE L1 -1198 6262 6090 2 1162 525 32 0 0 chr13 75717431 75717494 -44566818 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 1162 813 259 121 7 chr13 75717494 75717597 -44566715 - Lx6 LINE L1 -1371 6089 5960 2 1162 210 26 77 0 chr13 75717607 75717646 -44566666 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 2 1162 825 280 6 0 chr13 75718017 75718192 -44566120 + B3 SINE B2 3 178 -38 2 1162 5805 196 39 29 chr13 75718335 75719746 -44564566 + Lx7 LINE L1 5436 6887 -809 2 1162 180 0 0 0 chr13 75719748 75719768 -44564544 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 1162 251 213 21 0 chr13 75719770 75719864 -44564448 + GA-rich Low_complexity Low_complexity 3 98 0 2 1162 1828 232 119 138 chr13 75719864 75720736 -44563576 + Lx7 LINE L1 6853 7692 -4 2 1162 212 178 22 0 chr13 75720983 75721028 -44563284 + B4 SINE B4 2 47 -245 2 1162 1782 138 244 19 chr13 75721505 75721744 -44562568 + L1_Mm LINE L1 1805 2146 -3737 2 1162 3466 47 31 0 chr13 75721744 75722166 -44562146 - RLTR10C LTR ERVK -1 435 1 2 1162 1782 138 244 19 chr13 75722166 75722353 -44561959 + L1_Mm LINE L1 2147 2327 -3556 2 1162 1639 275 41 48 chr13 75722446 75722696 -44561616 - L1_Rod LINE L1 -1222 4625 4391 2 1162 405 0 0 0 chr13 75722696 75722741 -44561571 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1162 1639 275 41 48 chr13 75722741 75723324 -44560988 - L1_Rod LINE L1 -1457 4390 3800 2 1162 4914 139 56 4 chr13 75723350 75724297 -44560015 + Lx LINE L1 2456 3451 -2435 3 1162 6558 124 12 21 chr13 75724286 75725545 -44558767 + Lx LINE L1 5402 6654 0 3 1162 189 0 0 0 chr13 75726070 75726091 -44558221 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1162 198 0 0 0 chr13 75726266 75726288 -44558024 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1162 1249 62 20 101 chr13 75726288 75726445 -44557867 - B2_Mm2 SINE B2 -12 183 36 3 1162 6084 37 4 3 chr13 75726445 75727180 -44557132 - L1Md_F2 LINE L1 0 6582 5847 3 1162 1249 62 20 101 chr13 75727180 75727221 -44557091 - B2_Mm2 SINE B2 -160 35 1 3 1162 543 31 0 0 chr13 75727231 75727296 -44557016 + (TTTTG)n Simple_repeat Simple_repeat 3 67 0 3 1162 440 308 37 27 chr13 75727700 75727887 -44556425 - HERV16-int LTR ERVL -2777 2219 2031 3 1162 259 284 118 25 chr13 75728074 75728193 -44556119 - HERV16-int LTR ERVL -4131 865 736 3 1162 264 281 56 0 chr13 75728883 75728972 -44555340 + L3 LINE CR1 4219 4312 -177 3 1162 274 58 19 37 chr13 75729124 75729178 -44555134 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 3 1162 205 330 45 54 chr13 75729457 75729569 -44554743 + MIR3 SINE MIR 82 192 -16 3 1162 29 28 0 0 chr13 75730293 75730329 -44553983 + AT_rich Low_complexity Low_complexity 1 36 0 3 1162 1530 55 5 0 chr13 75731302 75731504 -44552808 + L1Md_F2 LINE L1 6380 6582 0 3 1162 180 0 0 0 chr13 75733303 75733323 -44550989 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 1162 261 0 0 0 chr13 75733323 75733351 -44550961 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1162 917 102 66 0 chr13 75733582 75733719 -44550593 + B1_Mus1 SINE Alu 2 147 -1 3 1162 585 0 0 0 chr13 75733936 75734001 -44550311 + (GA)n Simple_repeat Simple_repeat 2 66 0 3 1162 203 238 0 0 chr13 75734521 75734563 -44549749 + CT-rich Low_complexity Low_complexity 3 44 0 3 1162 352 367 59 18 chr13 75735407 75735576 -44548736 - MIRc SINE MIR -75 193 18 3 1162 323 349 66 0 chr13 75735861 75735967 -44548345 + PB1D7 SINE Alu 2 114 -6 3 1162 346 254 61 9 chr13 75736796 75736911 -44547401 - L1MC3 LINE L1 -277 7508 7388 3 1162 504 202 31 21 chr13 75736911 75737007 -44547305 + 5S rRNA rRNA 1 97 -24 3 1162 461 282 33 6 chr13 75737418 75737600 -44546712 - L1MC3 LINE L1 -583 7202 7016 3 1162 573 247 37 12 chr13 75737701 75737865 -44546447 - Lx6 LINE L1 -290 7170 7003 3 1162 405 0 0 0 chr13 75738179 75738224 -44546088 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1162 447 19 0 0 chr13 75738224 75738275 -44546037 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1162 212 279 32 16 chr13 75738320 75738382 -44545930 + B4A SINE B4 2 64 -228 3 1162 361 358 0 9 chr13 75738617 75738724 -44545588 + RSINE1 SINE B4 54 159 -6 3 1162 11515 85 27 17 chr13 75738862 75741483 -44542829 + L1VL2 LINE L1 85 2730 -885 3 1162 774 91 0 0 chr13 75741471 75741592 -44542720 + L1VL2 LINE L1 2863 2983 -632 3 1162 584 308 99 25 chr13 75742178 75742614 -44541698 - Zaphod DNA Tip100 -2377 1654 1187 3 1162 617 118 202 0 chr13 75742616 75742735 -44541577 + B2_Mm2 SINE B2 6 148 -47 3 1162 665 159 44 0 chr13 75742769 75742882 -44541430 + B2_Mm2 SINE B2 2 119 -76 3 1162 30 27 0 0 chr13 75742882 75742919 -44541393 + AT_rich Low_complexity Low_complexity 1 37 0 3 1162 790 303 18 26 chr13 75743373 75743715 -44540597 - RodERV21-int LTR ERV1 -198 4793 4455 3 1162 521 268 22 152 chr13 75743771 75744132 -44540180 + L1VL1 LINE L1 44 357 -6065 3 1162 422 229 24 18 chr13 75744196 75744341 -44539971 + L1Md_F LINE L1 548 806 -5813 3 1162 2308 142 4 70 chr13 75744349 75745169 -44539143 + L1Md_F LINE L1 728 1484 -2433 3 1162 2400 133 63 27 chr13 75745169 75745611 -44538701 + RLTR45 LTR ERVK 1 458 -24 3 1162 12581 93 6 1 chr13 75745611 75747483 -44536829 + L1Md_F LINE L1 3190 5070 -816 3 1162 711 80 53 0 chr13 75747484 75747597 -44536715 + L1_Mus2 LINE L1 6442 6560 -6 3 1162 783 88 158 16 chr13 75748126 75748253 -44536059 - B1_Mus1 SINE Alu -1 147 3 3 1162 5616 268 53 43 chr13 75748411 75750401 -44533911 - RodERV21-int LTR ERV1 -2273 2718 709 3 1162 8683 77 7 26 chr13 75751245 75752471 -44531841 - Lx3_Mus LINE L1 -12 6997 5796 3 1162 3088 92 14 0 chr13 75752472 75752917 -44531395 + Lx3_Mus LINE L1 5333 5783 -103 3 1162 526 126 58 0 chr13 75752936 75753023 -44531289 + B2_Mm1t SINE B2 102 193 0 3 1162 711 217 14 21 chr13 75753035 75753176 -44531136 + B1_Mur1 SINE Alu 8 147 -2 3 1162 303 262 54 129 chr13 75753185 75753426 -44530886 - Zaphod DNA Tip100 -2854 1177 955 3 1162 581 321 51 40 chr13 75753429 75753505 -44530807 + B4A SINE B4 2 81 -211 3 1162 356 0 0 22 chr13 75753505 75753550 -44530762 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 3 1162 581 321 51 40 chr13 75753550 75753726 -44530586 + B4A SINE B4 82 257 -35 3 1162 470 294 34 20 chr13 75753832 75753978 -44530334 + RSINE1 SINE B4 5 152 -13 3 1162 255 356 45 81 chr13 75754066 75754289 -44530023 + RMER13A LTR ERVK 21 235 -625 3 1162 230 0 33 0 chr13 75754580 75754610 -44529702 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1162 249 293 40 13 chr13 75754903 75754979 -44529333 + MLT1A LTR MaLR 37 114 -251 3 1162 189 121 0 0 chr13 75755356 75755389 -44528923 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1162 268 127 18 18 chr13 75755390 75755446 -44528866 + GA-rich Low_complexity Low_complexity 2 57 0 3 1162 390 335 32 32 chr13 75755449 75755606 -44528706 - RSINE1 SINE B4 -6 159 3 3 1162 552 43 106 11 chr13 75756583 75756677 -44527635 + L1_Mus3 LINE L1 6535 6637 -1 3 1162 475 347 30 94 chr13 75756730 75756997 -44527315 + MLT1A LTR MaLR 125 374 0 3 1162 390 311 146 32 chr13 75759044 75759290 -44525022 + MLT2C1 LTR ERVL 83 356 -41 3 1162 225 0 0 0 chr13 75759562 75759587 -44524725 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1163 385 291 49 6 chr13 75759662 75759837 -44524475 + L1M2 LINE L1 5609 5787 -504 3 1163 192 40 0 0 chr13 75759853 75759878 -44524434 + (CA)n Simple_repeat Simple_repeat 2 26 0 3 1163 284 224 116 29 chr13 75760252 75760321 -44523991 + ID4_ SINE ID 7 81 -2 3 1163 640 251 30 69 chr13 75760439 75760670 -44523642 + RMER15 LTR ERVL 307 528 -47 3 1163 21 0 0 0 chr13 75761853 75761874 -44522438 + AT_rich Low_complexity Low_complexity 1 21 0 3 1163 236 325 65 11 chr13 75761952 75762088 -44522224 + MIRb SINE MIR 37 175 -93 3 1163 3801 104 53 34 chr13 75762088 75762676 -44521636 - MT2B LTR ERVL -2 599 1 3 1163 33 43 0 0 chr13 75762918 75762965 -44521347 + AT_rich Low_complexity Low_complexity 1 47 0 3 1163 294 29 0 0 chr13 75763142 75763177 -44521135 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1163 452 250 62 0 chr13 75763586 75763682 -44520630 + B1_Mur1 SINE Alu 35 136 -13 3 1163 35 41 0 0 chr13 75764113 75764162 -44520150 + AT_rich Low_complexity Low_complexity 1 49 0 3 1163 314 291 89 0 chr13 75765231 75765310 -44519002 + PB1D10 SINE Alu 3 88 -29 3 1163 387 307 120 51 chr13 75765349 75765665 -44518647 - MLT2C1 LTR ERVL -54 343 6 3 1163 201 342 73 88 chr13 75765690 75765895 -44518417 + MIR SINE MIR 61 262 0 3 1163 2435 106 0 0 chr13 75765996 75766335 -44517977 - L1_Mus4 LINE L1 0 6636 6298 3 1163 582 54 0 0 chr13 75766451 75766525 -44517787 + (TC)n Simple_repeat Simple_repeat 2 75 0 3 1163 331 21 0 40 chr13 75766525 75766574 -44517738 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1163 651 273 21 7 chr13 75766577 75766721 -44517591 - B3A SINE B2 -48 150 5 3 1163 405 0 0 0 chr13 75767017 75767062 -44517250 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1163 539 316 64 69 chr13 75767226 75767603 -44516709 - Lx8 LINE L1 -322 7151 6777 3 1163 2172 142 58 0 chr13 75767971 75768336 -44515976 - ORR1B1 LTR MaLR -8 386 1 3 1163 5950 123 50 2 chr13 75768877 75770714 -44513598 + L1Md_F LINE L1 318 2245 -3638 3 1163 4059 118 9 13 chr13 75770715 75771410 -44512902 + L1Md_F LINE L1 3290 3981 -1902 3 1163 5372 124 11 46 chr13 75771405 75772354 -44511958 - L1VL1 LINE L1 -5315 1107 193 3 1163 308 220 110 0 chr13 75772591 75772691 -44511621 - L1MC3 LINE L1 -2 7783 7673 3 1163 348 331 116 49 chr13 75773147 75773342 -44510970 - HAL1 LINE L1 -810 1697 1497 3 1163 2777 182 9 33 chr13 75773342 75773917 -44510395 - RLTR31_Mm LTR ERVK 0 561 1 3 1163 348 331 116 49 chr13 75773917 75773988 -44510324 - HAL1 LINE L1 -1011 1496 1413 3 1163 396 0 0 0 chr13 75774614 75774658 -44509654 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1163 474 371 78 38 chr13 75774856 75775254 -44509058 + MLT1K LTR MaLR 180 593 -2 3 1163 531 280 62 147 chr13 75776787 75777155 -44507157 + L1M4 LINE L1 4899 5235 -911 3 1163 27 49 0 0 chr13 75777257 75777298 -44507014 + AT_rich Low_complexity Low_complexity 1 41 0 3 1163 1346 282 69 77 chr13 75777337 75777577 -44506735 - Lx9 LINE L1 -43 7601 7344 3 1163 378 0 0 0 chr13 75777577 75777619 -44506693 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1163 1558 281 69 77 chr13 75777619 75778180 -44506132 - Lx9 LINE L1 -301 7343 6807 3 1163 489 201 7 44 chr13 75778180 75778315 -44505997 - Lx4B LINE L1 -1 7057 6928 3 1163 265 310 103 35 chr13 75778461 75778635 -44505677 - L1M4 LINE L1 -458 5721 5536 3 1163 275 237 42 21 chr13 75778794 75778889 -44505423 - L1M4 LINE L1 -902 5244 5148 3 1163 549 266 50 15 chr13 75779181 75779383 -44504929 - L1M4 LINE L1 -1149 4997 4789 3 1163 3165 99 32 68 chr13 75779735 75780266 -44504046 + RLTR1B LTR ERV1 1 512 0 3 1163 264 268 14 0 chr13 75780465 75780536 -44503776 + L1M4 LINE L1 5595 5666 -458 3 1163 2630 112 3 3 chr13 75780792 75781160 -44503152 - RLTR9A LTR ERVK 0 368 1 3 1163 331 181 27 27 chr13 75781161 75781235 -44503077 - ETnERV2-int LTR ERVK -2 7404 7331 3 1163 2545 206 40 68 chr13 75781442 75782301 -44502011 - ETnERV2-int LTR ERVK -981 6425 5005 3 1163 207 0 0 0 chr13 75782674 75782697 -44501615 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1163 8409 151 96 26 chr13 75782718 75783206 -44501106 - RMER16-int LTR ERVK -2045 3361 2864 3 1163 188 35 35 0 chr13 75783206 75783235 -44501077 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 1163 8409 182 82 32 chr13 75783235 75785098 -44499214 - RMER16-int LTR ERVK -3486 3920 1402 3 1163 1739 148 13 13 chr13 75785196 75785497 -44498815 - ETnERV2-int LTR ERVK -5215 2191 1891 3 1163 3913 137 51 97 chr13 75786184 75786523 -44497789 - ETnERV2-int LTR ERVK -5500 1906 1581 3 1163 1193 62 0 0 chr13 75786523 75786669 -44497643 + B1_Mm SINE Alu 2 147 0 3 1163 3913 137 51 97 chr13 75786669 75787224 -44497088 - ETnERV2-int LTR ERVK -5826 1580 1053 3 1163 279 0 0 0 chr13 75787285 75787316 -44496996 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 3 1163 2352 95 60 0 chr13 75787632 75787979 -44496333 - RLTR9A LTR ERVK 0 368 1 3 1163 567 301 0 30 chr13 75788005 75788173 -44496139 - RSINE1 SINE B4 0 165 3 3 1163 22 0 0 0 chr13 75788574 75788596 -44495716 + AT_rich Low_complexity Low_complexity 1 22 0 3 1163 201 39 0 0 chr13 75789810 75789836 -44494476 + (TTG)n Simple_repeat Simple_repeat 1 26 0 3 1163 211 279 139 0 chr13 75789879 75789965 -44494347 - ID_B1 SINE B4 -40 184 87 3 1163 180 0 0 0 chr13 75790033 75790053 -44494259 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1163 254 344 33 0 chr13 75790065 75790155 -44494157 - MIRc SINE MIR -85 183 91 4 1163 273 225 0 0 chr13 75790385 75790474 -44493838 + (CA)n Simple_repeat Simple_repeat 1 89 0 4 1163 389 94 0 0 chr13 75790474 75790527 -44493785 + HAL1-3A_ME LINE L1 1976 2028 -830 4 1163 324 253 97 80 chr13 75790929 75791105 -44493207 + MER3 DNA MER1_type 13 191 -18 4 1163 275 366 29 41 chr13 75791157 75791328 -44492984 - MIR SINE MIR -90 172 4 4 1163 3055 232 64 33 chr13 75791366 75791563 -44492749 - Lx6 LINE L1 0 7460 7242 4 1163 234 0 0 0 chr13 75791563 75791589 -44492723 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 4 1163 3055 232 64 33 chr13 75791589 75792177 -44492135 - Lx6 LINE L1 -219 7241 6651 4 1163 22792 152 47 28 chr13 75792201 75793609 -44490703 - Lx6 LINE L1 -1636 6060 4625 4 1163 297 128 0 0 chr13 75793609 75793656 -44490656 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1163 22792 149 51 28 chr13 75793656 75794337 -44489975 - Lx6 LINE L1 -1256 4624 3909 4 1163 1116 88 129 0 chr13 75794337 75794507 -44489805 - B2_Mm2 SINE B2 -2 193 2 4 1163 22792 149 51 28 chr13 75794507 75797153 -44487159 - Lx6 LINE L1 -1972 3908 1224 4 1163 257 344 0 30 chr13 75797510 75797609 -44486703 - ID2 SINE ID -55 97 2 4 1163 367 207 50 67 chr13 75797965 75798086 -44486226 + L1_Mur1 LINE L1 635 831 -6151 4 1163 18118 176 51 29 chr13 75798161 75799128 -44485184 + L1_Mur1 LINE L1 203 1461 -4416 4 1163 2799 18 2 184 chr13 75799128 75799605 -44484707 + RLTR10 LTR ERVK 1 390 0 4 1163 18118 168 32 85 chr13 75799605 75799722 -44484590 + L1_Mur1 LINE L1 1462 1568 -4309 4 1163 1099 83 7 0 chr13 75799722 75799866 -44484446 + B1_Mm SINE Alu 3 147 0 4 1163 18118 168 32 85 chr13 75799866 75802304 -44482008 + L1_Mur1 LINE L1 1569 3927 -1950 4 1163 1124 73 6 68 chr13 75802304 75802472 -44481840 + B2_Mm1a SINE B2 1 159 -34 4 1163 297 0 0 0 chr13 75802472 75802505 -44481807 + (TTAA)n Simple_repeat Simple_repeat 3 35 0 4 1163 18118 168 32 85 chr13 75802513 75803924 -44480388 + L1_Mur1 LINE L1 3928 5372 -505 4 1163 29176 124 42 13 chr13 75803917 75810133 -44474179 + L1_Mus2 LINE L1 245 6566 0 4 1163 8547 110 53 11 chr13 75810164 75811719 -44472593 + Lx3C LINE L1 5359 6974 -2 4 1163 922 116 13 6 chr13 75811734 75811890 -44472422 + (GAAA)n Simple_repeat Simple_repeat 3 159 0 4 1163 1302 190 11 23 chr13 75812625 75812889 -44471423 - RLTR31B_Mm LTR ERVK -64 493 233 4 1163 21 36 0 0 chr13 75812994 75813022 -44471290 + AT_rich Low_complexity Low_complexity 1 28 0 4 1163 4258 103 5 0 chr13 75813298 75813879 -44470433 - MT2B2 LTR ERVL 0 584 1 4 1163 3030 3 5 83 chr13 75814465 75814863 -44469449 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1163 8241 59 92 70 chr13 75814863 75816142 -44468170 + IAPEz-int LTR ERVK 8 1313 -5168 4 1163 28973 18 1 2 chr13 75816141 75819416 -44464896 + IAPEz-int LTR ERVK 3210 6481 0 4 1163 3030 3 5 83 chr13 75819416 75819814 -44464498 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1163 377 333 96 25 chr13 75819971 75820168 -44464144 - L1ME3B LINE L1 -80 6160 5950 4 1163 476 261 65 120 chr13 75820180 75820211 -44464101 - B2_Mm2 SINE B2 -6 189 162 4 1163 195 42 0 0 chr13 75820211 75820235 -44464077 + (TATG)n Simple_repeat Simple_repeat 4 27 0 4 1163 687 233 125 11 chr13 75820235 75820403 -44463909 - B3 SINE B2 -44 172 1 4 1163 302 0 26 0 chr13 75820413 75820451 -44463861 + (TTG)n Simple_repeat Simple_repeat 2 40 0 4 1163 22 56 0 0 chr13 75820602 75820638 -44463674 + AT_rich Low_complexity Low_complexity 1 36 0 4 1163 313 227 26 7 chr13 75821067 75821153 -44463159 + MTEa LTR MaLR 271 379 0 4 1163 574 278 23 30 chr13 75821339 75821546 -44462766 - ID_B1 SINE B4 -24 200 6 4 1163 524 193 64 9 chr13 75822599 75822709 -44461603 + PB1D9 SINE Alu 2 117 -3 4 1163 238 162 0 0 chr13 75822709 75822746 -44461566 + polypurine Low_complexity Low_complexity 1 37 0 4 1163 677 97 10 0 chr13 75822746 75822849 -44461463 + (GA)n Simple_repeat Simple_repeat 1 104 0 4 1163 1995 131 107 11 chr13 75822849 75823203 -44461109 - RLTR9D LTR ERVK -12 391 4 4 1163 509 311 122 63 chr13 75823267 75823402 -44460910 + B4 SINE B4 22 170 -122 4 1163 2367 175 154 16 chr13 75823402 75823907 -44460405 + RMER15 LTR ERVL 1 575 0 4 1163 509 311 122 63 chr13 75823907 75824025 -44460287 + B4 SINE B4 171 290 -2 4 1163 364 312 47 40 chr13 75824270 75824420 -44459892 + MER5B DNA MER1_type 2 152 -26 4 1163 250 289 133 7 chr13 75824425 75824568 -44459744 - MIR SINE MIR -56 206 46 4 1163 575 276 160 11 chr13 75825123 75825310 -44459002 - B3 SINE B2 0 216 2 4 1163 2154 132 17 3 chr13 75825571 75825920 -44458392 - RLTR15 LTR ERVK -5 354 1 4 1163 404 280 71 16 chr13 75826855 75826982 -44457330 + MER5A DNA MER1_type 56 189 0 4 1163 305 0 0 48 chr13 75828102 75828144 -44456168 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 4 1163 590 305 102 24 chr13 75828393 75828871 -44455441 + L1ME1 LINE L1 4741 5264 -882 4 1163 855 120 0 0 chr13 75828871 75829038 -44455274 + (TC)n Simple_repeat Simple_repeat 2 168 0 4 1163 441 0 0 0 chr13 75829038 75829086 -44455226 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1163 425 218 58 17 chr13 75829086 75829259 -44455053 + L1ME1 LINE L1 5265 5450 -894 4 1163 234 291 36 18 chr13 75829696 75829808 -44454504 + PB1D10 SINE Alu 3 116 -1 4 1163 2200 160 92 0 chr13 75829820 75830202 -44454110 - MTC LTR MaLR -2 419 3 4 1163 271 321 0 89 chr13 75830229 75830352 -44453960 - MER57C2 LTR ERV1 -314 120 9 4 1163 537 239 87 0 chr13 75830367 75830505 -44453807 + URR1A DNA MER1_type 17 166 -60 4 1163 1945 132 109 3 chr13 75830509 75830858 -44453454 - ORR1B1 LTR MaLR -8 386 1 4 1163 442 108 0 0 chr13 75830858 75830923 -44453389 + URR1A DNA MER1_type 161 225 -1 4 1163 266 262 47 23 chr13 75830859 75830945 -44453367 - CYRA11_Mm Unknown Y-chromosome -380 237 150 4 1163 286 211 247 2 chr13 75830946 75831053 -44453259 + L1ME1 LINE L1 5470 5598 -566 4 1163 443 246 127 0 chr13 75831081 75831215 -44453097 + L1ME1 LINE L1 5845 5995 -184 4 1163 1787 223 92 0 chr13 75831275 75831656 -44452656 + MTC LTR MaLR 3 418 -3 4 1163 29 60 0 0 chr13 75831724 75831774 -44452538 + AT_rich Low_complexity Low_complexity 1 50 0 4 1163 1205 67 75 38 chr13 75832771 75832957 -44451355 + B2_Mm2 SINE B2 3 195 0 4 1163 393 58 0 0 chr13 75833221 75833273 -44451039 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1163 1264 208 106 36 chr13 75833908 75834237 -44450075 + RMER16 LTR ERVK 1 352 -181 4 1163 2437 116 7 50 chr13 75834243 75834661 -44449651 + Lx3B LINE L1 6537 6936 -37 4 1163 3073 33 2 143 chr13 75834683 75835137 -44449175 + RLTR10 LTR ERVK 1 390 0 4 1163 13457 32 0 1 chr13 75835147 75837018 -44447294 + RLTR10-int LTR ERVK 41 1984 -3 4 1163 3073 33 2 143 chr13 75837020 75837474 -44446838 + RLTR10 LTR ERVK 1 390 0 4 1163 24 0 0 0 chr13 75837510 75837534 -44446778 + AT_rich Low_complexity Low_complexity 1 24 0 4 1163 484 289 115 96 chr13 75837565 75837887 -44446425 - ORR1E LTR MaLR -5 354 27 4 1163 194 312 164 30 chr13 75838825 75838990 -44445322 + MIRc SINE MIR 24 210 -58 4 1163 309 297 121 0 chr13 75839041 75839132 -44445180 + PB1D7 SINE Alu 1 102 -18 4 1163 303 49 0 0 chr13 75839132 75839173 -44445139 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 4 1163 1901 77 16 0 chr13 75839176 75839422 -44444890 - L1_Mus3 LINE L1 -7 6631 6382 4 1163 960 36 36 0 chr13 75839698 75839837 -44444475 + (CTCTG)n Simple_repeat Simple_repeat 4 147 0 4 1163 341 171 24 0 chr13 75839947 75840029 -44444283 + GA-rich Low_complexity Low_complexity 2 85 0 4 1163 1143 119 0 0 chr13 75840030 75840206 -44444106 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 4 1163 255 352 12 70 chr13 75840310 75840481 -44443831 + RMER4A LTR ERVK 8 168 -298 4 1163 343 224 0 15 chr13 75841355 75841423 -44442889 - PB1D10 SINE Alu -33 84 18 4 1163 187 306 0 40 chr13 75841915 75841990 -44442322 + MIR3 SINE MIR 92 163 -45 4 1163 1301 48 0 0 chr13 75843439 75843585 -44440727 - B1_Mm SINE Alu 0 147 2 4 1163 285 244 21 85 chr13 75843663 75843757 -44440555 - PB1D7 SINE Alu 0 120 33 4 1163 297 75 0 0 chr13 75844359 75844399 -44439913 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 4 1163 234 192 77 0 chr13 75846533 75846585 -44437727 - MIR SINE MIR 0 262 207 4 1163 216 211 16 66 chr13 75846539 75846600 -44437712 - L2c LINE L2 -12 3375 3318 4 1163 243 0 0 0 chr13 75847938 75847965 -44436347 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 4 1163 207 0 0 0 chr13 75848982 75849005 -44435307 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1163 1197 56 21 0 chr13 75849005 75849149 -44435163 - B1_Mm SINE Alu 0 147 1 4 1163 457 221 9 37 chr13 75849263 75849371 -44434941 - BC1_Mm scRNA scRNA -47 105 1 4 1163 667 278 13 54 chr13 75849371 75849595 -44434717 - ID_B1 SINE B4 -8 216 2 4 1163 231 283 0 0 chr13 75849612 75849665 -44434647 - PB1D10 SINE Alu -1 116 64 4 1163 1073 115 0 26 chr13 75849749 75849901 -44434411 + B1_Mus1 SINE Alu 1 148 0 4 1163 1296 48 0 0 chr13 75849979 75850126 -44434186 + B1_Mus2 SINE Alu 1 147 0 4 1163 267 31 0 0 chr13 75850126 75850158 -44434154 + (A)n Simple_repeat Simple_repeat 1 32 0 4 1163 1738 26 0 20 chr13 75850227 75850423 -44433889 - B2_Mm1t SINE B2 0 193 2 4 1163 22 35 0 0 chr13 75850579 75850608 -44433704 + AT_rich Low_complexity Low_complexity 1 29 0 4 1163 459 0 0 0 chr13 75852818 75852869 -44431443 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1163 688 204 7 29 chr13 75852869 75853005 -44431307 + B1_Mur3 SINE Alu 12 144 -5 4 1163 180 77 0 0 chr13 75853048 75853074 -44431238 + (CAGG)n Simple_repeat Simple_repeat 3 28 0 4 1163 447 78 9 80 chr13 75853457 75853569 -44430743 + GA-rich Low_complexity Low_complexity 2 105 0 4 1163 1080 183 113 5 chr13 75853709 75853912 -44430400 - URR1B DNA MER1_type 0 225 1 4 1163 645 293 32 0 chr13 75853992 75854149 -44430163 - RSINE1 SINE B4 0 165 4 4 1163 219 111 22 22 chr13 75854275 75854321 -44429991 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1163 342 0 0 0 chr13 75854458 75854496 -44429816 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1163 239 317 157 14 chr13 75854698 75854845 -44429467 + L2 LINE L2 2168 2335 -1084 4 1163 225 312 37 61 chr13 75854858 75854884 -44429428 + ID_B1 SINE B4 64 111 -113 4 1163 237 244 0 0 chr13 75854884 75854925 -44429387 + B1F SINE Alu 5 45 -104 4 1163 225 312 37 61 chr13 75854925 75854940 -44429372 + ID_B1 SINE B4 112 143 -81 4 1163 420 157 58 0 chr13 75855033 75855112 -44429200 + B1F1 SINE Alu 59 143 -6 4 1163 917 176 70 42 chr13 75855165 75855379 -44428933 - Lx4B LINE L1 -17 7041 6822 4 1163 300 355 130 16 chr13 75855572 75855895 -44428417 + L2 LINE L2 2504 2863 -556 4 1163 212 162 0 0 chr13 75856190 75856227 -44428085 + T-rich Low_complexity Low_complexity 5 41 0 5 1163 839 176 178 21 chr13 75856627 75856818 -44427494 + URR1B DNA MER1_type 5 225 0 5 1163 772 317 10 102 chr13 75857126 75857421 -44426891 - B4A SINE B4 -23 269 2 5 1163 207 100 0 0 chr13 75858079 75858109 -44426203 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1163 28 0 0 0 chr13 75858112 75858140 -44426172 + AT_rich Low_complexity Low_complexity 1 28 0 5 1163 3690 99 10 4 chr13 75858148 75858635 -44425677 - Lx2 LINE L1 0 6997 6508 5 1163 187 262 66 0 chr13 75859809 75859870 -44424442 - L2 LINE L2 -1002 2417 2353 5 1163 772 115 57 0 chr13 75860374 75860496 -44423816 + ORR1A2 LTR MaLR 199 327 0 5 1163 8790 122 155 8 chr13 75860496 75862059 -44422253 + ORR1A2-int LTR MaLR 1 1792 0 5 1163 1970 121 97 3 chr13 75862059 75862358 -44421954 + ORR1A2 LTR MaLR 1 327 0 5 1163 668 234 100 40 chr13 75863049 75863249 -44421063 - B3 SINE B2 -3 213 2 5 1163 21 71 0 0 chr13 75863252 75863294 -44421018 + AT_rich Low_complexity Low_complexity 1 42 0 5 1163 521 286 7 7 chr13 75865986 75866134 -44418178 - B1F SINE Alu -1 148 1 5 1163 305 346 56 0 chr13 75866136 75866243 -44418069 - PB1D10 SINE Alu 0 117 5 5 1163 273 321 60 0 chr13 75866515 75866599 -44417713 + PB1D10 SINE Alu 7 95 -22 5 1163 188 34 0 33 chr13 75866612 75866642 -44417670 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1163 197 347 40 13 chr13 75868485 75868561 -44415751 - MIRb SINE MIR -36 232 155 5 1163 279 0 0 0 chr13 75868566 75868597 -44415715 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 1163 387 0 0 0 chr13 75869056 75869099 -44415213 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1163 1154 69 0 20 chr13 75869116 75869264 -44415048 - B1_Mus1 SINE Alu 0 148 4 5 1163 648 238 196 68 chr13 75869390 75869625 -44414687 + B4A SINE B4 6 270 -22 5 1163 219 69 0 0 chr13 75869670 75869699 -44414613 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1163 1111 195 28 28 chr13 75869908 75870124 -44414188 + B3 SINE B2 1 216 0 5 1163 630 258 15 0 chr13 75872382 75872514 -44411798 + ID_B1 SINE B4 91 224 0 5 1163 640 227 56 14 chr13 75873013 75873156 -44411156 + B3A SINE B2 50 198 0 5 1163 183 156 0 0 chr13 75873291 75873323 -44410989 + T-rich Low_complexity Low_complexity 3 34 0 5 1163 26 23 0 23 chr13 75874330 75874350 -44409962 + AT_rich Low_complexity Low_complexity 1 20 0 5 1163 5299 128 45 5 chr13 75874350 75875153 -44409159 + Lx2 LINE L1 6159 6993 -4 5 1163 26 23 0 23 chr13 75875153 75875176 -44409136 + AT_rich Low_complexity Low_complexity 1 23 0 5 1163 22 56 0 0 chr13 75875185 75875221 -44409091 + AT_rich Low_complexity Low_complexity 1 36 0 5 1163 21 0 0 0 chr13 75875372 75875393 -44408919 + AT_rich Low_complexity Low_complexity 1 21 0 5 1163 504 0 0 0 chr13 75876054 75876110 -44408202 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1163 272 332 105 36 chr13 75876359 75876606 -44407706 - L2c LINE L2 -14 3373 3110 5 1163 30 27 0 0 chr13 75877421 75877458 -44406854 + AT_rich Low_complexity Low_complexity 1 37 0 5 1163 262 241 71 24 chr13 75878005 75878090 -44406222 + L2a LINE L2 3338 3426 0 5 1163 295 247 96 0 chr13 75879149 75879222 -44405090 - MER103 DNA DNA -84 82 3 5 1163 495 329 88 0 chr13 75879320 75879536 -44404776 - L2a LINE L2 -1 3425 3191 5 1163 203 345 172 0 chr13 75879555 75879642 -44404670 + MIR3 SINE MIR 85 186 -22 5 1163 250 318 99 36 chr13 75881278 75881389 -44402923 - MER20 DNA MER1_type -23 196 79 5 1163 474 168 88 10 chr13 75881420 75881522 -44402790 + B2_Mm2 SINE B2 78 187 -8 5 1163 252 0 0 0 chr13 75881982 75882010 -44402302 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1163 1210 95 0 0 chr13 75882288 75882436 -44401876 - B1_Mus1 SINE Alu 0 148 1 5 1163 605 219 25 0 chr13 75883121 75883240 -44401072 + ID_B1 SINE B4 100 221 -3 5 1163 21 0 0 0 chr13 75884225 75884246 -44400066 + GC_rich Low_complexity Low_complexity 1 21 0 5 1163 887 170 22 0 chr13 75884247 75884382 -44399930 - B1_Mus1 SINE Alu -9 139 2 5 1163 351 202 116 11 chr13 75884894 75884989 -44399323 - MER3 DNA MER1_type -89 120 16 5 1163 462 318 19 39 chr13 75885357 75885511 -44398801 + RSINE1 SINE B4 15 165 0 5 1163 446 263 16 25 chr13 75885758 75885879 -44398433 + PB1D9 SINE Alu 1 120 0 5 1163 406 289 72 29 chr13 75889005 75889144 -44395168 - B1F SINE Alu -4 145 1 5 1163 215 339 32 16 chr13 75889447 75889573 -44394739 - L3b LINE CR1 -349 133 6 5 1163 221 367 90 9 chr13 75889812 75889954 -44394358 - MIRb SINE MIR 0 262 117 5 1164 441 0 0 0 chr13 75890712 75890761 -44393551 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1164 616 271 118 20 chr13 75894045 75894248 -44390064 + ID_B1 SINE B4 2 224 0 5 1164 25 31 0 0 chr13 75894307 75894339 -44389973 + AT_rich Low_complexity Low_complexity 1 32 0 5 1164 279 271 0 0 chr13 75894372 75894431 -44389881 - B1F1 SINE Alu -85 64 6 5 1164 866 59 404 7 chr13 75894696 75894832 -44389480 - B2_Mm2 SINE B2 -2 193 4 5 1164 908 184 13 20 chr13 75895353 75895503 -44388809 - B1_Mur4 SINE Alu 0 150 2 5 1164 221 213 63 32 chr13 75896125 75896188 -44388124 - MIR SINE MIR -22 240 176 5 1164 23 33 0 0 chr13 75896463 75896493 -44387819 + AT_rich Low_complexity Low_complexity 1 30 0 5 1164 527 221 36 7 chr13 75896722 75896859 -44387453 + MER2 DNA MER2_type 83 223 -122 5 1164 302 319 39 59 chr13 75897101 75897254 -44387058 - L2 LINE L2 -580 2839 2690 5 1164 394 276 61 30 chr13 75898521 75898652 -44385660 + RSINE1 SINE B4 11 145 -20 5 1164 636 252 122 63 chr13 75898720 75898974 -44385338 - Lx7 LINE L1 -1824 5872 5604 5 1164 1778 97 0 4 chr13 75898994 75899242 -44385070 + Lx LINE L1 6408 6654 0 5 1164 747 57 0 0 chr13 75900793 75900898 -44383414 + (TG)n Simple_repeat Simple_repeat 2 106 0 5 1164 21 0 0 0 chr13 75902881 75902902 -44381410 + AT_rich Low_complexity Low_complexity 1 21 0 5 1164 267 122 0 0 chr13 75903163 75903212 -44381100 + (TTTC)n Simple_repeat Simple_repeat 3 51 0 5 1164 21 36 0 0 chr13 75904995 75905023 -44379289 + AT_rich Low_complexity Low_complexity 1 28 0 5 1164 244 233 105 53 chr13 75907801 75907896 -44376416 - L1M5 LINE L1 -538 5635 5536 5 1164 792 32 0 0 chr13 75908817 75908912 -44375400 + (CATA)n Simple_repeat Simple_repeat 3 97 0 5 1164 270 0 0 0 chr13 75911948 75911978 -44372334 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1164 571 270 0 0 chr13 75911979 75912090 -44372222 - RSINE1 SINE B4 -43 122 12 5 1164 712 230 145 6 chr13 75913063 75913242 -44371070 + B3 SINE B2 2 205 -11 5 1164 227 351 27 0 chr13 75914127 75914201 -44370111 - LTR78 LTR ERV1 -242 1062 987 5 1164 552 319 109 29 chr13 75916950 75917274 -44367038 - MLT1F1 LTR MaLR -31 538 146 5 1164 2308 239 80 62 chr13 75918029 75918809 -44365503 + Lx9 LINE L1 6577 7370 -274 5 1164 960 160 7 7 chr13 75919081 75919226 -44365086 + B1_Mur1 SINE Alu 5 149 0 5 1164 1219 56 21 0 chr13 75919358 75919501 -44364811 + B1_Mus2 SINE Alu 2 147 0 5 1164 209 57 29 0 chr13 75919501 75919536 -44364776 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 5 1164 3601 92 8 8 chr13 75920599 75921123 -44363189 - L1_Mm LINE L1 -1863 4020 3497 5 1164 283 169 0 27 chr13 75921198 75921271 -44363041 + (TA)n Simple_repeat Simple_repeat 1 71 0 5 1164 240 35 0 0 chr13 75921510 75921539 -44362773 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1164 1335 262 88 47 chr13 75922375 75922911 -44361401 - L1M2 LINE L1 -813 5330 4773 5 1164 209 87 0 61 chr13 75923489 75923538 -44360774 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 1164 402 297 158 61 chr13 75924207 75924619 -44359693 + RLTR11A2 LTR ERVK 47 500 -27 5 1164 243 0 0 0 chr13 75924969 75924996 -44359316 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1164 251 292 122 20 chr13 75925513 75925611 -44358701 - B1F1 SINE Alu -41 108 1 5 1164 532 260 85 20 chr13 75925611 75925685 -44358627 - B4 SINE B4 -207 85 2 5 1164 239 326 71 0 chr13 75925913 75926011 -44358301 + Charlie4 DNA MER1_type 25 129 -1832 5 1164 516 163 32 32 chr13 75926176 75926334 -44357978 + (TATATG)n Simple_repeat Simple_repeat 5 162 0 5 1164 192 40 0 0 chr13 75926643 75926668 -44357644 + (GA)n Simple_repeat Simple_repeat 2 26 0 5 1164 548 40 13 0 chr13 75927703 75927778 -44356534 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 5 1164 34 24 0 0 chr13 75927837 75927878 -44356434 + AT_rich Low_complexity Low_complexity 1 41 0 5 1164 301 254 121 17 chr13 75930753 75930869 -44353443 + B1F SINE Alu 10 137 -12 5 1164 469 198 55 36 chr13 75930771 75930881 -44353431 + ID_B1 SINE B4 110 221 -3 5 1164 1157 191 173 42 chr13 75930881 75931172 -44353140 + Lx4B LINE L1 6710 7042 -16 5 1164 318 50 0 0 chr13 75931172 75931212 -44353100 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 5 1164 1157 191 173 42 chr13 75931212 75931226 -44353086 + Lx4B LINE L1 7043 7055 -3 5 1164 807 207 16 75 chr13 75932373 75932561 -44351751 + B3A SINE B2 15 191 -7 5 1164 598 157 241 32 chr13 75932602 75932760 -44351552 - URR1B DNA MER1_type -34 191 1 5 1164 342 0 0 0 chr13 75933423 75933461 -44350851 + (TC)n Simple_repeat Simple_repeat 1 38 0 5 1164 306 0 0 0 chr13 75933461 75933494 -44350818 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1164 320 282 80 167 chr13 75934078 75934329 -44349983 + Tigger7 DNA MER2_type 10 238 -2253 5 1164 410 206 0 115 chr13 75934425 75934446 -44349866 + MT2B LTR ERVL 149 157 -444 6 1164 636 107 22 0 chr13 75934446 75934553 -44349759 + B1_Mus2 SINE Alu 1 120 0 6 1164 275 256 175 13 chr13 75934579 75934733 -44349579 + Tigger7 DNA MER2_type 398 576 -1915 5 1164 272 276 40 0 chr13 75934733 75934809 -44349503 + Tigger7 DNA MER2_type 2375 2453 -38 5 1164 582 206 87 8 chr13 75934932 75935059 -44349253 + B1_Mur2 SINE Alu 9 145 -4 6 1164 200 147 29 0 chr13 75935432 75935466 -44348846 - L4 LINE RTE -206 1823 1789 6 1164 5114 131 78 23 chr13 75936745 75937600 -44346712 - RLTR13D6 LTR ERVK 0 902 1 6 1164 805 162 204 31 chr13 75938064 75938255 -44346057 - URR1A DNA MER1_type -2 224 1 6 1164 207 0 0 0 chr13 75939620 75939643 -44344669 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1164 225 0 0 0 chr13 75941066 75941091 -44343221 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 6 1164 220 320 0 0 chr13 75942381 75942456 -44341856 + (TG)n Simple_repeat Simple_repeat 2 76 0 6 1164 687 211 162 31 chr13 75942554 75942745 -44341567 + B3 SINE B2 1 216 0 6 1164 504 0 0 0 chr13 75942863 75942919 -44341393 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1164 186 43 0 0 chr13 75942978 75943001 -44341311 + (TTTTTG)n Simple_repeat Simple_repeat 5 27 0 6 1164 26 0 0 0 chr13 75943332 75943358 -44340954 + AT_rich Low_complexity Low_complexity 1 26 0 6 1164 352 117 26 13 chr13 75943358 75943436 -44340876 - Lx9 LINE L1 0 7644 7566 6 1164 339 181 54 27 chr13 75943442 75943516 -44340796 + B4 SINE B4 2 77 -215 6 1164 411 226 0 0 chr13 75944571 75944673 -44339639 + (CA)n Simple_repeat Simple_repeat 2 103 0 6 1164 1007 225 14 14 chr13 75944785 75945001 -44339311 + B3 SINE B2 1 216 0 6 1164 866 261 24 5 chr13 75945389 75945597 -44338715 - B3 SINE B2 -4 212 1 6 1164 982 269 68 103 chr13 75945732 75946022 -44338290 + RMER5 LTR ERV1 48 347 -187 6 1164 288 0 0 0 chr13 75946022 75946054 -44338258 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 6 1164 982 269 68 103 chr13 75946054 75946072 -44338240 + RMER5 LTR ERV1 348 361 -173 6 1164 1834 197 18 74 chr13 75946072 75946205 -44338107 + MTC LTR MaLR 1 107 -314 6 1164 1140 82 0 7 chr13 75946205 75946353 -44337959 - B1_Mus1 SINE Alu 0 148 2 6 1164 1834 197 18 74 chr13 75946353 75946663 -44337649 + MTC LTR MaLR 108 419 -2 6 1164 982 269 68 103 chr13 75946663 75946675 -44337637 + RMER5 LTR ERV1 362 369 -165 6 1164 844 242 94 40 chr13 75946675 75946950 -44337362 + B4A SINE B4 3 292 0 6 1164 982 269 68 103 chr13 75946950 75947124 -44337188 + RMER5 LTR ERV1 370 527 -7 6 1164 751 238 147 7 chr13 75947258 75947590 -44336722 + RLTR28B LTR ERVL 26 399 -125 6 1164 33010 69 5 4 chr13 75947981 75953191 -44331121 + L1Md_F2 LINE L1 376 5586 -297 6 1164 8300 35 17 0 chr13 75953192 75954170 -44330142 + L1Md_F2 LINE L1 5588 6582 0 6 1164 262 212 102 34 chr13 75954390 75954478 -44329834 + RLTR23 LTR ERV1 306 399 -31 6 1164 465 127 0 0 chr13 75955858 75955937 -44328375 + (CTTG)n Simple_repeat Simple_repeat 1 79 0 6 1164 204 324 29 14 chr13 75956453 75956591 -44327721 - MIR3 SINE MIR -28 180 40 6 1164 547 130 34 20 chr13 75956768 75956917 -44327395 + (CA)n Simple_repeat Simple_repeat 1 151 0 6 1164 309 155 53 15 chr13 75956956 75957087 -44327225 + (CA)n Simple_repeat Simple_repeat 1 136 0 6 1164 648 281 0 0 chr13 75958042 75958177 -44326135 + RSINE1 SINE B4 3 137 -28 6 1164 218 156 22 0 chr13 75958186 75958231 -44326081 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 6 1164 489 255 60 85 chr13 75958292 75958343 -44325969 + MER2 DNA MER2_type 103 153 -192 6 1164 1058 98 79 6 chr13 75958343 75958508 -44325804 - B2_Mm2 SINE B2 -15 180 4 6 1164 489 255 60 85 chr13 75958508 75958657 -44325655 + MER2 DNA MER2_type 154 298 -47 6 1164 1238 237 101 18 chr13 75959288 75959683 -44324629 + RLTR11A LTR ERVK 1 428 -100 6 1164 1675 36 0 0 chr13 75959772 75959965 -44324347 - B2_Mm1a SINE B2 0 193 1 6 1164 210 191 0 0 chr13 75960129 75960171 -44324141 + G-rich Low_complexity Low_complexity 6 47 0 6 1164 4223 61 40 9 chr13 75960186 75960729 -44323583 + LTRIS2 LTR ERV1 5 564 0 6 1164 1098 252 139 12 chr13 75960953 75961378 -44322934 - MER31A LTR ERV1 0 485 7 6 1164 354 206 15 0 chr13 75962060 75962128 -44322184 - ID2 SINE ID -7 76 8 6 1164 518 39 118 0 chr13 75963573 75963675 -44320637 + (CAGAG)n Simple_repeat Simple_repeat 3 116 0 6 1164 513 246 34 27 chr13 75963802 75963948 -44320364 + B1_Mur1 SINE Alu 2 148 -1 6 1164 21 0 0 0 chr13 75964142 75964163 -44320149 + AT_rich Low_complexity Low_complexity 1 21 0 6 1164 2788 62 5 52 chr13 75964354 75964759 -44319553 - RLTR10 LTR ERVK -4 386 1 6 1164 6291 40 5 0 chr13 75964761 75965501 -44318811 - IAPEz-int LTR ERVK -2 6479 5736 6 1164 2168 90 0 0 chr13 75965500 75965778 -44318534 - IAPEz-int LTR ERVK -4845 1636 1359 6 1164 4747 54 31 40 chr13 75965778 75966429 -44317883 - IAPEz-int LTR ERVK -5819 662 18 6 1164 371 63 6 34 chr13 75966449 75966519 -44317793 - IAPEz-int LTR ERVK -6412 69 3 6 1164 2788 62 5 52 chr13 75966522 75966927 -44317385 - RLTR10 LTR ERVK -4 386 1 6 1164 316 328 15 52 chr13 75966953 75967088 -44317224 - B4A SINE B4 -131 161 32 6 1164 317 319 52 0 chr13 75967388 75967504 -44316808 - L1M7 LINE L1 -5502 716 595 6 1164 3548 32 15 0 chr13 75967567 75967979 -44316333 + L1Md_F3 LINE L1 6167 6584 0 6 1164 664 159 0 0 chr13 75968356 75968463 -44315849 - MTC LTR MaLR -314 107 1 6 1164 721 224 30 30 chr13 75968463 75968624 -44315688 + B3 SINE B2 21 181 -35 6 1164 199 281 85 24 chr13 75970852 75970944 -44313368 + MIR SINE MIR 155 255 -13 6 1164 2043 100 86 10 chr13 75971487 75971791 -44312521 - ORR1A2 LTR MaLR 0 327 1 6 1164 8119 165 84 51 chr13 75971791 75973691 -44310621 - ORR1A2-int LTR MaLR 0 1963 1 6 1164 1208 98 0 35 chr13 75973691 75973891 -44310421 - ORR1A2 LTR MaLR 0 346 154 6 1164 3172 168 128 21 chr13 75973877 75974539 -44309773 - RMER13B LTR ERVK -175 733 1 6 1164 936 146 76 41 chr13 75974539 75974730 -44309582 - ORR1A2 LTR MaLR -175 219 1 6 1164 773 249 11 6 chr13 75975007 75975181 -44309131 - B3 SINE B2 -2 214 40 6 1164 731 254 54 101 chr13 75978617 75978915 -44305397 - B4A SINE B4 -1 291 8 6 1164 180 77 0 0 chr13 75979837 75979863 -44304449 + (TG)n Simple_repeat Simple_repeat 2 27 0 6 1164 398 254 26 26 chr13 75979870 75979987 -44304325 - B4A SINE B4 -26 266 150 6 1164 182 366 99 19 chr13 75980727 75980989 -44303323 - L2 LINE L2 -353 3066 2784 6 1164 960 288 121 18 chr13 75981024 75981470 -44302842 - RMER5 LTR ERV1 -42 492 1 6 1164 21 0 0 0 chr13 75981746 75981767 -44302545 + AT_rich Low_complexity Low_complexity 1 21 0 6 1164 205 290 163 39 chr13 75982239 75982368 -44301944 + MER5A DNA MER1_type 42 186 -3 6 1164 1110 82 0 0 chr13 75983924 75984071 -44300241 + B1_Mus1 SINE Alu 2 148 0 6 1164 248 0 0 30 chr13 75984080 75984113 -44300199 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 6 1164 1181 137 16 11 chr13 75984275 75984459 -44299853 - B2_Mm2 SINE B2 -8 187 3 6 1164 1116 43 0 0 chr13 75986416 75986554 -44297758 + (GA)n Simple_repeat Simple_repeat 2 139 0 6 1164 342 259 0 45 chr13 75987677 75987766 -44296546 + RSINE1 SINE B4 24 108 -57 6 1164 455 277 96 6 chr13 75987833 75988000 -44296312 - B3A SINE B2 -15 183 2 6 1164 455 277 96 6 chr13 75988524 75988691 -44295621 - B3A SINE B2 -15 183 2 6 1164 1176 243 65 31 chr13 75989870 75990222 -44294090 - MTEa LTR MaLR -4 375 12 6 1164 32 57 0 0 chr13 75990314 75990367 -44293945 + AT_rich Low_complexity Low_complexity 1 53 0 6 1164 362 159 12 47 chr13 75990922 75991008 -44293304 + URR1A DNA MER1_type 58 140 -86 6 1164 26 0 0 0 chr13 75991229 75991255 -44293057 + AT_rich Low_complexity Low_complexity 1 26 0 6 1164 10013 69 9 1 chr13 75991665 75993604 -44290708 - L1VL4 LINE L1 -1362 2197 242 6 1164 2403 95 6 0 chr13 75993901 75994226 -44290086 + ORR1A2 LTR MaLR 1 327 0 6 1164 325 253 100 50 chr13 75994360 75994489 -44289823 - MIR SINE MIR -63 199 68 6 1164 1711 245 201 31 chr13 75994606 75995321 -44288991 + Lx7 LINE L1 6844 7680 -16 6 1164 757 268 28 42 chr13 75995327 75995541 -44288771 - B3 SINE B2 -5 211 1 6 1164 771 189 139 0 chr13 75995563 75995743 -44288569 - B3 SINE B2 -9 207 3 6 1164 1455 234 60 3 chr13 75995983 75996348 -44287964 - RLTR18B LTR ERVK -3 509 124 6 1164 531 197 130 8 chr13 75996356 75996479 -44287833 - RLTR18B LTR ERVK -308 204 67 6 1164 219 139 0 0 chr13 75996479 75996515 -44287797 + (TTAA)n Simple_repeat Simple_repeat 3 38 0 6 1164 861 131 20 20 chr13 75996555 75996703 -44287609 - B1_Mur3 SINE Alu 0 149 2 6 1164 319 182 14 43 chr13 75996703 75996772 -44287540 - RLTR18B LTR ERVK -545 71 5 6 1164 209 318 62 26 chr13 75996986 75997099 -44287213 - MIR SINE MIR -64 198 82 6 1164 2011 169 21 21 chr13 75997964 75998338 -44285974 - ORR1D1 LTR MaLR 0 374 1 6 1164 254 361 84 42 chr13 75998488 75998702 -44285610 - RMER13A LTR ERVK -39 821 599 6 1164 1110 261 100 38 chr13 75998762 75999181 -44285131 - RMER13A LTR ERVK -395 465 21 6 1164 2678 36 2 201 chr13 75999319 75999801 -44284511 + RLTR10 LTR ERVK 1 386 -4 6 1164 1516 33 11 0 chr13 75999817 76000000 -44284312 + RLTR10-int LTR ERVK 41 225 -1762 6 1164 6673 34 0 0 chr13 76000000 76000763 -44283549 + RLTR10-int LTR ERVK 226 988 -999 1 1164 8801 24 0 3 chr13 76000842 76001840 -44282472 + RLTR10-int LTR ERVK 990 1984 -3 1 1164 2858 39 2 203 chr13 76001842 76002330 -44281982 + RLTR10 LTR ERVK 1 390 0 1 1164 1708 197 98 10 chr13 76002819 76003070 -44281242 + Lx9 LINE L1 7008 7267 -377 2 1164 459 0 0 0 chr13 76003070 76003121 -44281191 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1164 1708 197 98 10 chr13 76003121 76003258 -44281054 + Lx9 LINE L1 7268 7429 -215 2 1164 362 121 17 0 chr13 76003601 76003659 -44280653 + Lx9 LINE L1 7420 7478 -166 2 1164 531 128 0 0 chr13 76003659 76003745 -44280567 + (CA)n Simple_repeat Simple_repeat 2 87 0 4 1164 275 290 281 21 chr13 76004502 76004787 -44279525 - MLT1D LTR MaLR -137 368 10 5 1164 1309 34 0 13 chr13 76005059 76005208 -44279104 + B1_Mus2 SINE Alu 1 147 0 6 1164 224 304 79 26 chr13 76005653 76005805 -44278507 - L2c LINE L2 -38 3349 3190 7 1164 1270 68 0 0 chr13 76006290 76006438 -44277874 - B1_Mus1 SINE Alu 0 148 1 8 1164 333 0 0 0 chr13 76006438 76006475 -44277837 + (CTG)n Simple_repeat Simple_repeat 1 37 0 9 1164 1196 52 0 23 chr13 76006475 76006652 -44277660 + (TTC)n Simple_repeat Simple_repeat 3 175 0 1 1164 647 180 158 38 chr13 76008903 76009036 -44275276 + B1_Mur3 SINE Alu 1 149 0 1 1164 374 331 47 0 chr13 76009097 76009224 -44275088 - MER45A DNA Tip100 -15 163 31 1 1164 821 142 103 15 chr13 76010846 76010982 -44273330 + B1_Mur2 SINE Alu 1 148 -1 1 1164 285 128 0 0 chr13 76010994 76011041 -44273271 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 1 1164 312 321 19 9 chr13 76011361 76011468 -44272844 + ID_B1 SINE B4 117 224 0 1 1164 232 325 0 178 chr13 76012717 76012747 -44271565 - ID_B1 SINE B4 -23 201 127 1 1164 278 263 9 181 chr13 76012747 76012810 -44271502 - B1_Mus2 SINE Alu -51 96 48 1 1164 1664 16 20 41 chr13 76012810 76013007 -44271305 - B2_Mm1a SINE B2 0 193 1 1 1164 232 325 0 178 chr13 76013007 76013059 -44271253 - ID_B1 SINE B4 -98 126 82 1 1164 2529 109 100 5 chr13 76013826 76014205 -44270107 + RLTR9F LTR ERVK 1 415 0 1 1164 2299 142 168 88 chr13 76017211 76017736 -44266576 + RMER2 LTR ERV1 1 567 0 2 1164 640 266 30 86 chr13 76018548 76018771 -44265541 - B4A SINE B4 -1 291 88 2 1164 471 274 157 7 chr13 76018978 76019125 -44265187 - B3 SINE B2 -46 170 2 2 1164 189 0 0 0 chr13 76019242 76019263 -44265049 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1164 1276 34 0 13 chr13 76019263 76019412 -44264900 - B1_Mus2 SINE Alu 0 147 1 2 1164 729 261 16 37 chr13 76020708 76020899 -44263413 + Lx9 LINE L1 6306 6492 -1152 2 145 4298 197 98 0 chr13 76020901 76021808 -44262504 + Lx9 LINE L1 6644 7639 -5 2 1165 600 275 53 7 chr13 76021884 76022034 -44262278 + RSINE1 SINE B4 2 158 -7 2 1165 523 214 151 0 chr13 76022403 76022529 -44261783 + B3 SINE B2 3 147 -69 2 1165 1644 176 34 0 chr13 76022677 76022972 -44261340 + L1_Mus1 LINE L1 901 1205 -5411 2 1165 31462 111 13 3 chr13 76022940 76024827 -44259485 + L1_Mus1 LINE L1 1108 2998 -2885 2 1165 189 74 0 0 chr13 76024827 76024854 -44259458 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1165 31462 98 6 3 chr13 76024854 76028414 -44255898 + L1_Mus1 LINE L1 2999 6654 0 2 1165 309 109 0 0 chr13 76028445 76028491 -44255821 + (A)n Simple_repeat Simple_repeat 1 46 0 3 1165 553 231 129 15 chr13 76028503 76028635 -44255677 + B1_Mur2 SINE Alu 3 149 0 3 1165 345 62 0 0 chr13 76030840 76030888 -44253424 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1165 441 303 45 8 chr13 76032265 76032398 -44251914 + B1F SINE Alu 1 138 -11 3 1165 322 287 134 89 chr13 76032406 76032563 -44251749 + RSINE1 SINE B4 2 165 0 3 1165 29433 125 24 5 chr13 76032812 76038933 -44245379 + L1_Mus3 LINE L1 396 6638 0 3 1165 385 171 0 0 chr13 76039295 76039365 -44244947 + B1_Mus1 SINE Alu 2 71 -77 3 1165 444 276 36 89 chr13 76039913 76039949 -44244363 - CYRA11_Mm Unknown Y-chromosome -215 402 171 3 1165 1138 172 24 0 chr13 76039949 76040158 -44244154 + URR1B DNA MER1_type 12 225 0 3 1165 2115 137 72 6 chr13 76040824 76040949 -44243363 - ORR1C2 LTR MaLR 0 384 242 3 1165 2185 97 6 56 chr13 76040949 76041288 -44243024 + RLTRETN_Mm LTR ERVK 1 322 0 4 1165 2115 137 72 6 chr13 76041288 76041522 -44242790 - ORR1C2 LTR MaLR -143 241 2 3 1165 216 371 0 0 chr13 76041633 76041695 -44242617 + MIR SINE MIR 58 119 -89 4 1165 632 258 94 10 chr13 76041946 76042138 -44242174 - B3 SINE B2 -6 210 3 4 1165 347 268 33 60 chr13 76042207 76042358 -44241954 - MER63A DNA AcHobo -63 147 1 4 1165 732 23 0 0 chr13 76043123 76043209 -44241103 + (GAA)n Simple_repeat Simple_repeat 2 87 0 4 1165 242 287 139 54 chr13 76043254 76043383 -44240929 + MER5B DNA MER1_type 4 143 -35 4 1165 238 108 77 0 chr13 76046787 76046852 -44237460 + (CATA)n Simple_repeat Simple_repeat 1 70 0 4 1165 385 235 194 9 chr13 76047558 76047730 -44236582 - L1M3 LINE L1 -412 5762 5565 4 1165 339 355 26 0 chr13 76049621 76049773 -44234539 + L4 LINE RTE 1606 1761 -268 4 1165 186 133 0 0 chr13 76050022 76050052 -44234260 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 1165 286 282 65 35 chr13 76050439 76050608 -44233704 - L1MC4 LINE L1 -254 7788 7615 5 1165 30 59 0 0 chr13 76051047 76051098 -44233214 + AT_rich Low_complexity Low_complexity 1 51 0 5 1165 776 328 127 27 chr13 76051452 76051862 -44232450 - MER115 DNA Tip100 -75 618 168 5 1165 225 0 0 0 chr13 76051952 76051977 -44232335 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 1165 1235 55 7 0 chr13 76051987 76052133 -44232179 - B1_Mm SINE Alu 0 147 1 5 1165 350 337 52 82 chr13 76052502 76052793 -44231519 + B4 SINE B4 5 286 -6 5 1165 1056 239 73 17 chr13 76053677 76054139 -44230173 - Lx7 LINE L1 0 7696 7137 5 1165 326 164 254 0 chr13 76054134 76054201 -44230111 - Lx7 LINE L1 -703 6993 6910 5 1165 1214 230 77 0 chr13 76054351 76054612 -44229700 + B4 SINE B4 6 286 -6 5 1165 232 343 9 61 chr13 76054635 76054750 -44229562 + B1_Mur4 SINE Alu 8 116 -34 5 1165 694 273 42 32 chr13 76054647 76054836 -44229476 + B4 SINE B4 102 292 0 5 1165 953 233 34 5 chr13 76055819 76056026 -44228286 - B3 SINE B2 0 216 4 6 1165 2370 141 32 5 chr13 76056387 76056794 -44227518 - MTC LTR MaLR -3 418 1 6 1165 498 288 14 14 chr13 76057151 76057292 -44227020 - RSINE1 SINE B4 -6 159 19 6 1165 631 174 45 15 chr13 76057307 76057441 -44226871 + B1_Mur2 SINE Alu 7 144 -5 6 1165 262 264 49 0 chr13 76057466 76057548 -44226764 - MIRc SINE MIR -102 166 84 6 1165 929 148 19 0 chr13 76058313 76058468 -44225844 - URR1A DNA MER1_type -33 193 36 6 1165 3198 39 23 0 chr13 76058468 76058852 -44225460 + MTA_Mm LTR MaLR 1 393 -3 6 1165 32988 72 7 2 chr13 76058852 76064017 -44220295 + L1Md_F2 LINE L1 392 5585 -298 6 1165 6324 68 122 19 chr13 76064018 76064916 -44219396 + L1Md_F2 LINE L1 5587 6577 -5 6 1165 232 214 0 0 chr13 76064928 76064970 -44219342 - URR1A DNA MER1_type -184 42 1 6 1165 570 263 15 0 chr13 76065431 76065568 -44218744 + ID_B1 SINE B4 86 224 0 6 1165 244 348 11 0 chr13 76065658 76065750 -44218562 + PB1D10 SINE Alu 24 116 -1 6 1165 22 35 0 0 chr13 76067855 76067884 -44216428 + AT_rich Low_complexity Low_complexity 1 29 0 7 1165 527 256 150 6 chr13 76068228 76068401 -44215911 - B3A SINE B2 0 198 1 7 1165 216 97 0 0 chr13 76068514 76068545 -44215767 + (GGAA)n Simple_repeat Simple_repeat 4 34 0 7 1165 349 256 33 0 chr13 76069225 76069315 -44214997 + PB1D7 SINE Alu 23 115 -5 7 1165 239 276 117 48 chr13 76070666 76070769 -44213543 + Arthur1B DNA Tip100 76 185 -1040 7 1165 451 257 139 23 chr13 76071034 76071344 -44212968 + Arthur1B DNA Tip100 868 1213 -12 7 1165 490 258 59 84 chr13 76071405 76071608 -44212704 + B3A SINE B2 1 198 0 7 1165 18798 48 0 2 chr13 76071702 76074011 -44210301 + L1Md_F2 LINE L1 3283 5586 -297 7 1165 8490 36 1 1 chr13 76074011 76075007 -44209305 + L1Md_F2 LINE L1 5587 6582 0 7 1165 248 250 41 52 chr13 76075671 76075768 -44208544 + L1M5 LINE L1 5730 5825 -337 7 1165 1235 224 182 14 chr13 76075929 76076287 -44208025 + MTD LTR MaLR 2 419 0 7 1165 284 169 127 0 chr13 76077238 76077309 -44207003 + ORR1D1 LTR MaLR 3 82 -292 7 1165 407 199 47 0 chr13 76078106 76078211 -44206101 - B1F SINE Alu -6 111 1 8 1165 219 69 0 0 chr13 76081752 76081781 -44202531 + (A)n Simple_repeat Simple_repeat 1 29 0 8 1165 287 210 32 0 chr13 76082387 76082449 -44201863 + B1F1 SINE Alu 72 135 -14 8 1165 369 0 0 0 chr13 76082450 76082491 -44201821 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 8 1165 3240 49 10 7 chr13 76082665 76083073 -44201239 + L1Md_F2 LINE L1 6174 6582 0 8 1165 757 293 61 3 chr13 76083231 76083543 -44200769 + L1MB2 LINE L1 5816 6145 -26 8 1165 265 258 82 88 chr13 76084637 76084807 -44199505 + MLT1J1 LTR MaLR 15 183 -261 8 1165 4326 249 50 26 chr13 76084807 76085990 -44198322 + Lx8 LINE L1 6241 7451 -22 8 1165 198 103 0 0 chr13 76086043 76086072 -44198240 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1165 227 262 71 151 chr13 76086211 76086302 -44198010 + MLT1J1 LTR MaLR 314 398 -50 8 1165 5635 52 30 7 chr13 76086302 76087015 -44197297 - L1_Mus3 LINE L1 -3 6635 5907 8 1165 227 262 71 151 chr13 76087015 76087049 -44197263 + MLT1J1 LTR MaLR 399 429 -19 8 1165 348 24 0 0 chr13 76087307 76087348 -44196964 + (GA)n Simple_repeat Simple_repeat 2 42 0 9 1165 518 268 16 16 chr13 76087496 76087625 -44196687 - RSINE1 SINE B4 -34 131 3 9 1165 553 286 126 87 chr13 76087625 76088150 -44196162 + Charlie7 DNA MER1_type 616 1161 -1451 9 1165 333 244 12 24 chr13 76088305 76088389 -44195923 - PB1D7 SINE Alu -1 119 37 9 1165 183 42 0 0 chr13 76088494 76088518 -44195794 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 9 1165 4960 33 0 0 chr13 76088565 76089137 -44195175 - L1Md_T LINE L1 0 6582 6011 9 1165 1866 217 44 34 chr13 76089168 76089685 -44194627 - RLTR20A LTR ERVK -64 514 1 9 1165 613 270 29 67 chr13 76089685 76089895 -44194417 + B3 SINE B2 5 206 -10 9 1165 852 268 9 9 chr13 76090465 76090680 -44193632 + B3 SINE B2 1 215 -1 9 1165 415 338 0 20 chr13 76090687 76090835 -44193477 + B1_Mur2 SINE Alu 3 147 -2 9 1165 747 140 7 14 chr13 76091348 76091493 -44192819 - URR1A DNA MER1_type -1 225 82 1 1165 288 0 0 0 chr13 76092576 76092608 -44191704 + (T)n Simple_repeat Simple_repeat 1 32 0 1 1165 1680 184 59 14 chr13 76094132 76094490 -44189822 - ORR1D1 LTR MaLR 0 374 1 1 1165 234 0 0 0 chr13 76094494 76094520 -44189792 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1165 1380 236 17 91 chr13 76094887 76095289 -44189023 + Lx7 LINE L1 7025 7397 -299 1 1165 468 0 0 0 chr13 76095289 76095341 -44188971 + (TC)n Simple_repeat Simple_repeat 2 53 0 1 1165 249 33 0 0 chr13 76095341 76095370 -44188942 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1165 1380 236 17 91 chr13 76095370 76095385 -44188927 + Lx7 LINE L1 7398 7411 -285 1 1165 2598 275 130 47 chr13 76096001 76097107 -44187205 + Lx8 LINE L1 6276 7473 0 1 1165 1578 185 63 28 chr13 76097884 76098246 -44186066 + ORR1C1 LTR MaLR 4 378 0 1 1165 378 280 158 16 chr13 76098279 76098406 -44185906 + RSINE1 SINE B4 2 146 -19 1 1165 315 0 0 0 chr13 76098413 76098448 -44185864 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1165 186 43 0 0 chr13 76098706 76098729 -44185583 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1165 2007 245 52 92 chr13 76099786 76100800 -44183512 - RMER1A Other Other -354 676 1 1 1165 4347 188 87 9 chr13 76101284 76102117 -44182195 + Lx9 LINE L1 6602 7451 -193 1 1165 303 28 0 0 chr13 76102117 76102153 -44182159 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1165 4347 188 87 9 chr13 76102153 76102208 -44182104 + Lx9 LINE L1 7452 7559 -85 1 1165 1164 175 68 61 chr13 76102252 76102562 -44181750 - RLTR20C LTR ERVK -222 312 1 1 1165 2043 159 45 24 chr13 76102562 76102979 -44181333 + RLTR11A2 LTR ERVK 101 526 -1 1 1165 1278 123 0 26 chr13 76102980 76103172 -44181140 + B2_Mm2 SINE B2 1 187 -8 1 1165 403 241 11 0 chr13 76103198 76103285 -44181027 - B3 SINE B2 -124 92 5 1 1165 351 164 41 0 chr13 76103487 76103560 -44180752 - HAL1-3A_ME LINE L1 -807 2051 1976 1 1165 180 158 0 0 chr13 76103588 76103626 -44180686 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1165 1382 180 148 9 chr13 76103664 76103989 -44180323 - RMER21B LTR ERV1 0 842 473 1 1165 433 230 16 47 chr13 76104036 76104164 -44180148 - RLTR22_Mur LTR ERVK -124 1724 1601 1 1165 1489 229 28 8 chr13 76104178 76104569 -44179743 - RLTR22_Mur LTR ERVK -1035 813 415 1 1165 339 239 33 22 chr13 76104623 76104713 -44179599 + RLTR23 LTR ERV1 340 430 0 1 1165 950 169 279 22 chr13 76104716 76104988 -44179324 - RMER21B LTR ERV1 -373 469 128 1 1165 790 284 66 11 chr13 76106634 76106908 -44177404 + B4A SINE B4 2 290 -2 1 1165 825 226 28 28 chr13 76107802 76108016 -44176296 - Lx4B LINE L1 0 7058 6845 1 1165 2149 92 33 60 chr13 76108584 76108920 -44175392 + ORR1A2 LTR MaLR 1 327 0 1 1165 4757 155 102 8 chr13 76108920 76109983 -44174329 + ORR1A2-int LTR MaLR 1 1163 -800 1 1165 5249 85 1 3 chr13 76109983 76110704 -44173608 - L1_Mm LINE L1 -2274 3609 2890 1 1165 5122 34 7 0 chr13 76110704 76111300 -44173012 + L1Md_F2 LINE L1 5983 6582 0 1 1165 5397 111 14 6 chr13 76111320 76112126 -44172186 + ORR1A2-int LTR MaLR 1152 1963 0 1 1165 1523 116 66 58 chr13 76112126 76112400 -44171912 + ORR1A2 LTR MaLR 1 276 -51 1 1165 685 153 0 149 chr13 76112396 76112557 -44171755 - ORR1A4 LTR MaLR -188 141 5 1 1165 377 301 29 14 chr13 76114212 76114350 -44169962 + B1F SINE Alu 1 140 -9 1 1165 180 0 0 0 chr13 76114362 76114382 -44169930 + (GA)n Simple_repeat Simple_repeat 2 21 0 1 1165 310 338 0 0 chr13 76114386 76114460 -44169852 + ID4_ SINE ID 10 83 0 1 1165 762 201 7 34 chr13 76114555 76114704 -44169608 + B1_Mur1 SINE Alu 4 148 -1 1 1165 593 238 216 4 chr13 76115262 76115507 -44168805 + Lx8 LINE L1 6876 7172 -301 1 1165 24 32 0 0 chr13 76115770 76115801 -44168511 + AT_rich Low_complexity Low_complexity 1 31 0 1 1165 7281 87 13 1 chr13 76116040 76117331 -44166981 - L1_Mus4 LINE L1 -4 6632 5314 1 1165 4348 75 3 0 chr13 76117330 76117957 -44166355 - MusHAL1 LINE L1 -1469 1243 615 1 1165 1815 226 0 8 chr13 76117941 76118329 -44165983 - L1VL4 LINE L1 -5917 385 1 1 1165 283 274 59 0 chr13 76118660 76118762 -44165550 - MLT1L LTR MaLR 0 610 503 1 1165 1054 206 28 14 chr13 76119458 76119670 -44164642 - B3 SINE B2 -1 215 1 1 1165 531 0 0 0 chr13 76119838 76119897 -44164415 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1165 721 159 0 31 chr13 76119897 76120027 -44164285 - RLTR20B1 LTR ERVK -107 456 331 1 1165 1019 157 0 6 chr13 76120029 76120189 -44164123 - RLTR20B1 LTR ERVK -404 159 1 1 1165 245 311 21 53 chr13 76121560 76121655 -44162657 - BC1_Mm scRNA scRNA -46 106 15 1 1165 765 179 0 0 chr13 76121716 76121850 -44162462 - B1_Mur1 SINE Alu -15 134 1 1 1165 369 0 0 0 chr13 76121949 76121990 -44162322 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1165 21 0 0 0 chr13 76122528 76122549 -44161763 + AT_rich Low_complexity Low_complexity 1 21 0 1 1165 4770 58 16 5 chr13 76122549 76123156 -44161156 - Lx3_Mus LINE L1 0 7009 6396 1 1165 3784 84 0 8 chr13 76123157 76123687 -44160625 - L1_Mur1 LINE L1 -9 5877 5352 1 1165 3986 57 58 9 chr13 76123688 76124272 -44160040 + L1_Mur1 LINE L1 4755 5367 -519 1 1165 180 313 30 0 chr13 76124452 76124519 -44159793 - L2a LINE L2 -4 3422 3354 1 1165 1949 144 75 11 chr13 76127031 76127390 -44156922 - ORR1C2 LTR MaLR 0 384 3 1 1165 29 28 0 0 chr13 76128853 76128889 -44155423 + AT_rich Low_complexity Low_complexity 1 36 0 1 1165 417 258 20 20 chr13 76129482 76129581 -44154731 - PB1 SINE Alu -8 119 21 1 1165 216 0 0 0 chr13 76129597 76129621 -44154691 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1165 241 311 40 0 chr13 76129621 76129695 -44154617 - ID4_ SINE ID -6 77 1 1 1165 361 256 39 55 chr13 76130741 76130869 -44153443 - L1M5 LINE L1 -1591 4555 4430 1 1165 513 0 0 0 chr13 76130961 76131018 -44153294 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1165 465 34 0 0 chr13 76131018 76131076 -44153236 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1165 433 331 0 88 chr13 76131111 76131270 -44153042 + ID_B1 SINE B4 2 146 -78 1 1165 1172 74 0 0 chr13 76132002 76132150 -44152162 + B1_Mus1 SINE Alu 1 148 0 1 1165 580 327 38 58 chr13 76133669 76133909 -44150403 + B4A SINE B4 58 292 0 1 1165 311 294 30 10 chr13 76133960 76134163 -44150149 + L1_Mur3 LINE L1 2185 2391 -3752 1 1165 558 309 104 101 chr13 76134200 76134567 -44149745 - ORR1E LTR MaLR 0 370 3 1 1165 373 297 44 70 chr13 76134585 76134929 -44149383 + L1_Mur3 LINE L1 2432 2766 -3377 1 1165 466 238 76 42 chr13 76134952 76135220 -44149092 + L1_Mur3 LINE L1 3680 3933 -2207 1 1165 1984 170 7 30 chr13 76136484 76136889 -44147423 - Lx LINE L1 -116 6538 6143 1 1165 382 192 27 0 chr13 76137010 76137083 -44147229 - B3 SINE B2 -140 76 2 1 1165 1997 60 0 33 chr13 76137254 76137529 -44146783 + L1Md_T LINE L1 6317 6582 0 1 1165 715 267 37 6 chr13 76137556 76137718 -44146594 + B3 SINE B2 27 193 -23 1 1165 306 353 8 49 chr13 76137893 76138063 -44146249 - PB1 SINE Alu -20 291 2 1 1165 337 275 18 9 chr13 76138462 76138572 -44145740 - B3A SINE B2 -86 112 2 1 1165 628 171 36 0 chr13 76139184 76139295 -44145017 - B1_Mur2 SINE Alu -6 143 29 1 1165 807 230 57 26 chr13 76139950 76140142 -44144170 - B3A SINE B2 0 198 1 1 1165 375 227 59 40 chr13 76140649 76140750 -44143562 + PB1D10 SINE Alu 14 116 -1 1 1165 240 86 0 0 chr13 76141618 76141653 -44142659 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1 1165 24 53 0 0 chr13 76141769 76141807 -44142505 + AT_rich Low_complexity Low_complexity 1 38 0 1 1165 211 224 0 49 chr13 76141934 76141995 -44142317 + T-rich Low_complexity Low_complexity 1 58 0 1 1165 13805 71 100 22 chr13 76141997 76144650 -44139662 - L1_Mus1 LINE L1 0 6567 3611 1 1165 235 169 0 119 chr13 76144650 76144717 -44139595 - ID_B1 SINE B4 0 224 166 1 1165 461 66 0 0 chr13 76144661 76144722 -44139590 - B1_Mus2 SINE Alu -6 141 81 1 1165 13805 71 100 22 chr13 76144722 76145041 -44139271 - L1_Mus1 LINE L1 0 3610 3254 1 1165 4482 47 9 4 chr13 76146114 76146673 -44137639 + L1Md_F2 LINE L1 6021 6582 0 1 1165 610 311 7 0 chr13 76148598 76148746 -44135566 - ID_B1 SINE B4 -68 156 8 1 1165 938 201 24 42 chr13 76148926 76149139 -44135173 - B3 SINE B2 -7 209 1 1 1165 2283 131 34 13 chr13 76150057 76150443 -44133869 + ORR1B1 LTR MaLR 1 394 0 1 1165 210 37 0 0 chr13 76150529 76150556 -44133756 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1165 688 181 35 28 chr13 76150566 76150708 -44133604 + B1_Mur1 SINE Alu 2 144 -5 1 1165 335 253 57 25 chr13 76150970 76151228 -44133084 + L1M5 LINE L1 5226 5513 -727 1 1165 226 238 119 0 chr13 76151341 76151425 -44132887 + L1M5 LINE L1 5729 5822 -418 1 1165 907 239 21 0 chr13 76151524 76151712 -44132600 - B3 SINE B2 0 216 25 1 1165 232 241 114 11 chr13 76152480 76152568 -44131744 - L1MA8 LINE L1 -4 6287 6191 1 145 7626 98 11 3 chr13 76152757 76154536 -44129776 + L1_Mus4 LINE L1 4844 6634 -2 1 1166 23 0 0 0 chr13 76154735 76154758 -44129554 + AT_rich Low_complexity Low_complexity 1 23 0 1 1166 268 298 75 0 chr13 76156835 76156929 -44127383 + RSINE1 SINE B4 2 102 -63 1 1166 261 351 109 22 chr13 76157719 76157856 -44126456 - B1F1 SINE Alu 0 149 1 1 1166 2033 130 6 58 chr13 76157996 76158340 -44125972 - ORR1A3 LTR MaLR 0 326 1 1 1166 666 290 28 65 chr13 76158446 76158660 -44125652 - B3 SINE B2 -3 213 8 1 1166 281 24 49 0 chr13 76158735 76158776 -44125536 + (TTTTTG)n Simple_repeat Simple_repeat 2 44 0 1 1166 943 260 5 0 chr13 76158810 76159018 -44125294 - B3 SINE B2 -6 210 2 1 1166 1155 195 114 51 chr13 76159792 76160144 -44124168 - ORR1D1 LTR MaLR 0 374 1 1 1166 457 152 0 29 chr13 76160619 76160721 -44123591 + GA-rich Low_complexity Low_complexity 4 102 0 1 1166 22 35 0 0 chr13 76161159 76161188 -44123124 + AT_rich Low_complexity Low_complexity 1 29 0 1 1166 285 312 0 12 chr13 76161196 76161277 -44123035 - MER68 LTR ERVL -469 94 15 1 1166 285 320 69 106 chr13 76161283 76161500 -44122812 + MER68 LTR ERVL 176 384 -179 1 1166 266 321 0 0 chr13 76163684 76163740 -44120572 - B1F2 SINE Alu -92 57 2 2 1166 252 159 0 0 chr13 76163755 76163799 -44120513 - L1MC4 LINE L1 -510 7532 7489 2 1166 234 301 27 0 chr13 76164022 76164095 -44120217 + Arthur1B DNA Tip100 106 180 -1045 2 1166 550 264 28 14 chr13 76164245 76164387 -44119925 + RSINE1 SINE B4 3 146 -19 2 1166 459 35 0 0 chr13 76164404 76164461 -44119851 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1166 1611 239 126 9 chr13 76164695 76165260 -44119052 + RMER1B Other Other 1 631 -435 2 1166 1971 143 102 3 chr13 76165263 76165635 -44118677 + RMER1A Other Other 609 1017 -13 2 1166 251 230 34 11 chr13 76166067 76166155 -44118157 + (TA)n Simple_repeat Simple_repeat 1 90 0 2 1166 1230 82 50 0 chr13 76166619 76166801 -44117511 - L1_Mm LINE L1 -3048 2835 2645 2 1166 5747 67 31 0 chr13 76166797 76167532 -44116780 + L1Md_F2 LINE L1 4828 5585 -298 2 1166 8175 63 3 6 chr13 76167533 76168531 -44115781 + L1Md_F2 LINE L1 5587 6581 -1 2 1166 366 343 65 30 chr13 76168900 76169177 -44115135 + MLT1G3 LTR MaLR 3 342 -253 2 1166 435 273 112 31 chr13 76169739 76169908 -44114404 + MLT1G3 LTR MaLR 395 583 -12 2 1166 2950 40 0 21 chr13 76170091 76170425 -44113887 + IAPLTR2b LTR ERVK 1 327 0 2 1166 1189 117 81 73 chr13 76170427 76170675 -44113637 + IAPEz-int LTR ERVK 3 252 -7329 2 1166 250 302 0 0 chr13 76170675 76170728 -44113584 + RLTR27 LTR ERVK 223 275 -34 2 1166 4819 99 61 46 chr13 76170728 76171693 -44112619 + IAPEz-int LTR ERVK 168 995 -5486 2 1166 446 70 0 0 chr13 76171693 76171750 -44112562 + B1_Mus1 SINE Alu 1 57 -91 2 1166 1948 67 4 0 chr13 76171755 76171994 -44112318 + IAPEY3-int LTR ERVK 2258 2497 -5183 2 1166 14039 78 8 8 chr13 76171993 76173817 -44110495 + IAPEz-int LTR ERVK 4656 6479 -2 2 1166 3030 25 0 21 chr13 76173819 76174153 -44110159 + IAPLTR2b LTR ERVK 1 327 0 2 1166 1546 218 207 7 chr13 76174550 76174989 -44109323 - RLTR24 LTR ERV1 -2 527 1 2 1166 275 293 29 39 chr13 76175074 76175177 -44109135 - MLT1J1 LTR MaLR -279 165 64 2 1166 17067 154 25 13 chr13 76175342 76176388 -44107924 - L1VL2 LINE L1 -1478 4405 3340 2 1166 315 0 0 0 chr13 76176388 76176423 -44107889 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2 1166 17067 153 26 18 chr13 76176423 76178579 -44105733 - L1VL2 LINE L1 -2544 3339 1212 2 1166 1133 96 0 14 chr13 76178579 76178727 -44105585 - B1_Mus1 SINE Alu 0 148 3 2 1166 5058 147 35 79 chr13 76178727 76179565 -44104747 - L1VL2 LINE L1 -5405 1229 367 2 1166 2280 144 18 8 chr13 76179565 76179949 -44104363 - RMER12 LTR ERVK -934 388 1 2 1166 607 276 21 7 chr13 76179949 76180091 -44104221 - B1_Mur1 SINE Alu -4 145 2 2 1166 438 205 0 0 chr13 76180591 76180669 -44103643 + ORR1B1 LTR MaLR 76 153 -241 2 1166 235 247 89 56 chr13 76180827 76180916 -44103396 + ORR1B1 LTR MaLR 281 372 -7 2 1166 1819 179 63 6 chr13 76180916 76181281 -44103031 + ORR1B1 LTR MaLR 1 386 -8 2 1166 345 269 216 0 chr13 76181305 76181439 -44102873 - MER57E2 LTR ERV1 -239 163 1 2 1166 592 333 124 36 chr13 76181744 76182186 -44102126 - MLT1H2 LTR MaLR -3 486 6 2 1166 973 249 164 13 chr13 76182430 76182735 -44101577 + ORR1E LTR MaLR 3 353 -6 2 1166 2654 197 79 51 chr13 76182790 76183412 -44100900 + RLTR26 LTR ERVK 4 642 0 2 1166 182 363 94 38 chr13 76184438 76184544 -44099768 - MIRc SINE MIR -155 113 2 2 1166 2202 142 22 11 chr13 76185210 76185567 -44098745 - ORR1C1 LTR MaLR -3 375 15 2 1166 278 350 74 79 chr13 76186685 76186887 -44097425 - MLT2B1 LTR ERVL -172 348 148 2 1166 1825 183 80 167 chr13 76187043 76187665 -44096647 - RLTR12A LTR ERVK 0 568 1 2 1166 1354 109 51 14 chr13 76187812 76188026 -44096286 + L1_Mus4 LINE L1 6415 6636 0 2 1166 965 248 24 28 chr13 76188690 76188879 -44095433 + RMER10B LTR ERVL 2 193 -205 2 1166 531 0 0 0 chr13 76188879 76188938 -44095374 + (TTCTC)n Simple_repeat Simple_repeat 1 59 0 2 1166 1410 56 0 0 chr13 76188941 76189121 -44095191 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 2 1166 965 248 24 28 chr13 76189121 76189180 -44095132 + RMER10B LTR ERVL 194 248 -150 2 1166 202 345 148 7 chr13 76189225 76189374 -44094938 + L2b LINE L2 3203 3372 -3 2 1166 309 260 129 38 chr13 76189729 76189861 -44094451 + RLTR23 LTR ERV1 287 430 0 2 1166 541 240 93 0 chr13 76191924 76192053 -44092259 - B1F SINE Alu 0 149 9 2 1166 195 125 0 0 chr13 76192704 76192744 -44091568 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 2 1166 203 152 0 0 chr13 76196304 76196337 -44087975 + CT-rich Low_complexity Low_complexity 3 35 0 2 1166 3341 126 66 31 chr13 76196364 76196881 -44087431 - Lx3C LINE L1 -7 6969 6435 2 1166 39 22 0 0 chr13 76196921 76196967 -44087345 + AT_rich Low_complexity Low_complexity 1 46 0 2 1166 1821 173 131 3 chr13 76197088 76197425 -44086887 + RLTR14 LTR ERV1 3 382 0 2 1166 253 136 23 0 chr13 76197556 76197600 -44086712 - ID_B1 SINE B4 0 224 180 2 1166 542 185 28 9 chr13 76197717 76197826 -44086486 + B1_Mm SINE Alu 37 147 0 2 1166 26 50 0 0 chr13 76198306 76198346 -44085966 + AT_rich Low_complexity Low_complexity 1 40 0 2 1166 794 253 16 21 chr13 76198452 76198642 -44085670 - B3 SINE B2 -1 215 27 2 1166 4071 92 64 2 chr13 76200272 76200894 -44083418 + L1_Mm LINE L1 3080 3740 -2143 2 1166 23 33 0 0 chr13 76201414 76201444 -44082868 + AT_rich Low_complexity Low_complexity 1 30 0 2 1166 264 291 83 25 chr13 76201601 76201721 -44082591 + MIRb SINE MIR 69 195 -73 2 1166 1675 109 79 11 chr13 76201978 76202257 -44082055 - RMER17A2 LTR ERVK 0 906 609 2 1166 1776 102 11 15 chr13 76202251 76202519 -44081793 - RMER17A2 LTR ERVK -639 267 1 2 1166 500 0 17 0 chr13 76202976 76203036 -44081276 + (TTA)n Simple_repeat Simple_repeat 3 63 0 2 1166 213 309 140 89 chr13 76203111 76203346 -44080966 + MIR SINE MIR 9 255 -7 2 1166 411 101 116 0 chr13 76203352 76203421 -44080891 + B1_Mur4 SINE Alu 74 150 0 2 1166 324 146 0 0 chr13 76203420 76203468 -44080844 + ORR1D1 LTR MaLR 87 134 -240 2 1166 630 228 153 5 chr13 76203585 76203775 -44080537 + ORR1D1 LTR MaLR 157 374 0 2 1166 21 0 0 0 chr13 76203854 76203875 -44080437 + AT_rich Low_complexity Low_complexity 1 21 0 2 1166 195 185 46 0 chr13 76205106 76205125 -44079187 + polypyrimidine Low_complexity Low_complexity 50 68 0 2 1166 1130 111 0 16 chr13 76205125 76205308 -44079004 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 2 1166 195 185 46 0 chr13 76205308 76205353 -44078959 + CT-rich Low_complexity Low_complexity 2 49 0 2 1166 450 94 0 0 chr13 76205345 76205409 -44078903 + (TCCCC)n Simple_repeat Simple_repeat 3 66 0 2 1166 3002 176 108 40 chr13 76205780 76206113 -44078199 + RMER6C LTR ERVK 1 332 -358 2 1166 423 0 0 0 chr13 76206113 76206160 -44078152 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1166 549 0 0 0 chr13 76206160 76206220 -44078092 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 1166 3002 176 108 40 chr13 76206220 76206531 -44077781 + RMER6C LTR ERVK 333 689 -1 2 1166 317 284 10 83 chr13 76206658 76206754 -44077558 - RSINE1 SINE B4 0 165 77 2 1166 209 347 142 24 chr13 76207014 76207141 -44077171 + L2a LINE L2 3029 3170 -256 2 1166 486 341 23 0 chr13 76207575 76207704 -44076608 + ID_B1 SINE B4 77 208 -16 2 1166 211 286 0 51 chr13 76208709 76208768 -44075544 - B3A SINE B2 -142 56 1 2 1166 233 229 0 20 chr13 76209822 76209871 -44074441 + L1VL4 LINE L1 183 230 -6072 2 1166 990 127 6 6 chr13 76209863 76210022 -44074290 + L1_Mm LINE L1 4850 5008 -875 2 1166 3748 103 4 13 chr13 76210019 76210561 -44073751 - L1_Mm LINE L1 -1018 4865 4329 2 1166 3334 167 43 2 chr13 76210561 76211120 -44073192 + Lx LINE L1 6073 6654 0 2 1166 1598 275 114 10 chr13 76211284 76211967 -44072345 + Tigger6a DNA MER2_type 330 1083 0 2 1166 246 222 37 0 chr13 76212759 76212813 -44071499 + MTB_Mm LTR MaLR 1 56 -351 2 1166 228 136 73 29 chr13 76213966 76214034 -44070278 + (CAAAC)n Simple_repeat Simple_repeat 2 72 0 2 1166 4715 16 0 0 chr13 76214658 76215151 -44069161 - MT2_Mm LTR ERVL 0 493 1 2 1166 322 0 0 0 chr13 76215151 76215189 -44069123 - MERVL-int LTR ERVL 0 5485 5448 2 1166 387 167 46 35 chr13 76215189 76215276 -44069036 - ORR1A3-int LTR MaLR -1323 640 553 2 1166 48375 17 4 0 chr13 76215276 76220617 -44063695 - MERVL-int LTR ERVL -125 5360 1 2 1166 4715 16 0 0 chr13 76220617 76221110 -44063202 - MT2_Mm LTR ERVL 0 493 1 2 1166 756 255 68 23 chr13 76221119 76221340 -44062972 - MTEa LTR MaLR -9 370 140 2 1166 302 193 132 0 chr13 76221487 76221570 -44062742 + L1_Mur2 LINE L1 883 976 -6110 2 1166 4913 133 22 14 chr13 76221568 76222383 -44061929 + L1_Mur2 LINE L1 2217 3038 -2839 2 1166 30780 136 35 2 chr13 76222400 76223265 -44061047 + L1_Mus1 LINE L1 380 1273 -4610 2 1166 1629 26 11 0 chr13 76223265 76223456 -44060856 + B2_Mm1t SINE B2 1 193 0 2 1166 30780 88 6 5 chr13 76223456 76228740 -44055572 + L1_Mus1 LINE L1 1274 6566 -1 2 1166 26 50 0 0 chr13 76228740 76228780 -44055532 + AT_rich Low_complexity Low_complexity 1 40 0 2 1166 267 127 0 68 chr13 76228780 76228839 -44055473 - B1_Mus2 SINE Alu 0 147 93 2 1166 212 195 0 35 chr13 76229274 76229359 -44054953 + A-rich Low_complexity Low_complexity 1 82 0 2 1166 234 234 0 0 chr13 76229953 76230000 -44054312 + CT-rich Low_complexity Low_complexity 2 48 0 2 1166 549 291 24 112 chr13 76230005 76230210 -44054102 - B4A SINE B4 -105 187 1 2 1166 28 29 0 0 chr13 76231714 76231749 -44052563 + AT_rich Low_complexity Low_complexity 1 35 0 2 1166 2358 132 14 83 chr13 76231883 76231957 -44052355 - ORR1B1 LTR MaLR 0 394 348 2 1166 922 72 59 98 chr13 76231957 76232110 -44052202 - B1_Mus2 SINE Alu 0 147 1 2 1166 2358 132 14 83 chr13 76232110 76232458 -44051854 - ORR1B1 LTR MaLR -47 347 1 2 1166 794 241 89 0 chr13 76232521 76232712 -44051600 - ID_B1 SINE B4 -9 215 8 2 1166 786 216 118 67 chr13 76232830 76233068 -44051244 - MTD LTR MaLR 0 419 170 2 1166 198 103 0 0 chr13 76233162 76233191 -44051121 + (TTC)n Simple_repeat Simple_repeat 1 29 0 2 1166 231 69 0 0 chr13 76233195 76233224 -44051088 + MTD LTR MaLR 22 50 -357 2 1166 1444 209 88 55 chr13 76233280 76233644 -44050668 + MTD LTR MaLR 20 395 -24 2 1166 288 262 0 222 chr13 76233642 76233750 -44050562 - MTD LTR MaLR -290 89 6 2 1166 1327 262 135 46 chr13 76233999 76234628 -44049684 - L1MB8 LINE L1 -12 6166 5482 2 1166 270 0 0 0 chr13 76234629 76234659 -44049653 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1166 521 219 97 0 chr13 76234803 76234958 -44049354 - L1MB8 LINE L1 -693 5481 5312 2 1166 500 276 207 35 chr13 76234954 76235330 -44048982 - L1MB8 LINE L1 -1061 5085 4645 2 1166 1167 168 18 18 chr13 76235406 76235630 -44048682 - URR1B DNA MER1_type -1 224 1 2 1166 203 220 357 27 chr13 76237054 76237166 -44047146 - MIRb SINE MIR -16 252 104 2 1166 257 351 117 34 chr13 76237505 76237744 -44046568 - L3 LINE CR1 -30 4459 4201 2 1166 3250 197 49 20 chr13 76237881 76238579 -44045733 - Lx5 LINE L1 -5 7045 6328 2 1166 2678 137 14 9 chr13 76238596 76239032 -44045280 + L1_Mur2 LINE L1 5313 5750 -127 2 1166 820 147 0 53 chr13 76239053 76239204 -44045108 - B1_Mus2 SINE Alu 0 147 5 2 1166 297 214 211 11 chr13 76239342 76239432 -44044880 - MLT1A LTR MaLR 0 374 267 3 1166 665 312 11 16 chr13 76239584 76239773 -44044539 - RMER15 LTR ERVL -109 466 279 3 1166 421 229 48 162 chr13 76239793 76239960 -44044352 - RMER15 LTR ERVL -427 148 1 3 1166 2146 139 3 6 chr13 76240844 76241177 -44043135 - MTC LTR MaLR 0 421 90 3 1166 634 264 154 10 chr13 76241254 76241553 -44042759 - Lx9 LINE L1 -81 7563 7222 3 1166 1445 221 72 19 chr13 76241553 76241968 -44042344 + RCHARR1 DNA MER1_type 538 974 0 3 1166 29 28 0 0 chr13 76244949 76244985 -44039327 + AT_rich Low_complexity Low_complexity 1 36 0 3 1166 279 254 0 16 chr13 76245001 76245065 -44039247 - ID_B1 SINE B4 -19 205 143 3 1166 559 324 65 45 chr13 76245196 76245552 -44038760 - L2a LINE L2 -9 3417 3055 3 1166 491 284 74 7 chr13 76246008 76246143 -44038169 - RSINE1 SINE B4 -6 159 16 3 1166 239 319 189 8 chr13 76246223 76246466 -44037846 - L2a LINE L2 -1635 1784 1498 3 1166 1204 257 204 62 chr13 76246711 76247298 -44037014 - RLTR40 LTR ERVK -14 803 145 3 1166 822 177 0 7 chr13 76247298 76247440 -44036872 - B1_Mur3 SINE Alu -5 144 4 3 1166 1204 257 204 62 chr13 76247440 76247542 -44036770 - RLTR40 LTR ERVK -673 144 16 3 1166 368 243 93 81 chr13 76247738 76247899 -44036413 - RSINE1 SINE B4 0 165 3 3 1166 24 0 0 0 chr13 76249348 76249372 -44034940 + AT_rich Low_complexity Low_complexity 1 24 0 3 1166 1121 232 63 43 chr13 76249781 76250209 -44034103 - MT2A LTR ERVL 0 601 2 3 1166 26 30 0 0 chr13 76251620 76251653 -44032659 + AT_rich Low_complexity Low_complexity 1 33 0 3 1166 286 318 0 0 chr13 76252631 76252697 -44031615 - PB1 SINE Alu -12 115 50 3 1166 204 40 0 0 chr13 76252697 76252722 -44031590 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1166 332 298 24 16 chr13 76252745 76252871 -44031441 + CT-rich Low_complexity Low_complexity 2 128 0 3 1166 189 0 0 0 chr13 76252948 76252969 -44031343 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1166 189 0 0 0 chr13 76252969 76252989 -44031323 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 1166 453 246 15 4 chr13 76252992 76253269 -44031043 + (CA)n Simple_repeat Simple_repeat 1 280 0 3 1166 377 286 9 54 chr13 76253289 76253400 -44030912 - PB1D10 SINE Alu 0 117 12 3 1166 25 0 0 0 chr13 76253529 76253554 -44030758 + AT_rich Low_complexity Low_complexity 1 25 0 3 1166 2368 241 191 26 chr13 76253726 76254623 -44029689 - Lx9 LINE L1 -235 7409 6365 3 1166 212 59 29 0 chr13 76254638 76254672 -44029640 + (TA)n Simple_repeat Simple_repeat 1 35 0 3 1166 293 287 76 110 chr13 76255125 76255270 -44029042 + MTEa LTR MaLR 1 140 -239 3 1166 396 328 9 26 chr13 76255276 76255392 -44028920 + PB1D7 SINE Alu 1 114 -6 3 1166 327 146 0 0 chr13 76255911 76255966 -44028346 + (CATA)n Simple_repeat Simple_repeat 2 56 0 3 1166 222 37 0 0 chr13 76256089 76256116 -44028196 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 1166 2616 198 191 38 chr13 76257630 76258400 -44025912 - RMER19B LTR ERVK 0 902 15 3 1166 423 0 0 0 chr13 76259315 76259362 -44024950 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1166 431 209 153 15 chr13 76259422 76259553 -44024759 + B1F SINE Alu 1 149 0 3 1166 501 212 0 0 chr13 76259939 76260052 -44024260 + (TA)n Simple_repeat Simple_repeat 2 114 0 3 1166 216 346 131 0 chr13 76260319 76260426 -44023886 + MIR SINE MIR 26 146 -116 3 1166 275 233 41 0 chr13 76260787 76260860 -44023452 + B4 SINE B4 2 77 -215 3 1166 278 115 19 0 chr13 76261541 76261593 -44022719 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 1166 906 219 36 10 chr13 76261668 76261862 -44022450 - B3 SINE B2 -6 210 12 3 1166 21 36 0 0 chr13 76261867 76261895 -44022417 + AT_rich Low_complexity Low_complexity 1 28 0 3 1166 347 183 12 0 chr13 76261900 76261982 -44022330 + CT-rich Low_complexity Low_complexity 4 86 0 3 1166 361 329 93 7 chr13 76261989 76262139 -44022173 - RSINE1 SINE B4 0 165 3 3 1166 616 231 37 0 chr13 76262962 76263096 -44021216 + B1F SINE Alu 5 143 -6 3 1166 297 288 76 29 chr13 76263475 76263647 -44020665 + L1MC5 LINE L1 7044 7223 -738 3 1166 243 286 0 0 chr13 76263872 76263956 -44020356 + L1MC5 LINE L1 7488 7571 -390 3 1166 331 310 98 29 chr13 76264031 76264277 -44020035 + L1MC5 LINE L1 7670 7932 -29 3 1166 340 226 84 34 chr13 76264546 76264665 -44019647 + BC1_Mm scRNA scRNA 1 125 -27 3 1166 738 216 138 0 chr13 76264717 76264898 -44019414 - B3 SINE B2 -10 206 1 3 1166 486 0 0 0 chr13 76265140 76265194 -44019118 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1166 1240 54 0 0 chr13 76265308 76265456 -44018856 - B1_Mus1 SINE Alu 0 148 1 3 1166 697 256 77 0 chr13 76265562 76265757 -44018555 - B3 SINE B2 -6 210 1 3 1166 320 231 28 14 chr13 76265874 76266019 -44018293 + (CATA)n Simple_repeat Simple_repeat 4 150 0 3 1166 673 325 12 36 chr13 76267231 76267480 -44016832 - B4A SINE B4 0 292 50 3 1166 24 0 0 0 chr13 76268931 76268955 -44015357 + AT_rich Low_complexity Low_complexity 1 24 0 3 1166 185 35 69 0 chr13 76269057 76269086 -44015226 + (ATTTG)n Simple_repeat Simple_repeat 3 33 0 3 1166 1428 171 207 0 chr13 76269218 76269522 -44014790 - ORR1B2 LTR MaLR 0 367 1 3 1166 22 0 0 0 chr13 76269563 76269585 -44014727 + AT_rich Low_complexity Low_complexity 1 22 0 3 1166 201 132 0 0 chr13 76269872 76269910 -44014402 + (T)n Simple_repeat Simple_repeat 1 38 0 3 1166 773 113 194 0 chr13 76269910 76270034 -44014278 - B1_Mus1 SINE Alu 0 148 1 3 1166 220 221 171 29 chr13 76270965 76271035 -44013277 + B4A SINE B4 1 80 -212 3 1166 285 322 115 0 chr13 76271148 76271235 -44013077 + PB1 SINE Alu 3 99 -28 3 1166 939 156 39 16 chr13 76271322 76271504 -44012808 + Lx2B LINE L1 6800 6985 -15 3 1166 273 57 0 0 chr13 76271508 76271543 -44012769 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 1166 1225 275 103 35 chr13 76273307 76273734 -44010578 - Lx8 LINE L1 -93 7380 6913 3 1166 189 0 0 0 chr13 76273734 76273755 -44010557 + (TA)n Simple_repeat Simple_repeat 2 22 0 3 1166 1225 275 103 35 chr13 76273755 76273840 -44010472 - Lx8 LINE L1 -561 6912 6833 3 1166 320 185 0 0 chr13 76274098 76274152 -44010160 - B1F SINE Alu -9 140 87 3 1166 3475 33 0 0 chr13 76274160 76274556 -44009756 - MTA_Mm LTR MaLR 0 396 1 3 1166 34 24 0 0 chr13 76274936 76274977 -44009335 + AT_rich Low_complexity Low_complexity 1 41 0 3 1166 228 357 31 23 chr13 76275934 76276063 -44008249 - MIRb SINE MIR -20 248 119 3 1166 29 60 0 0 chr13 76276884 76276934 -44007378 + AT_rich Low_complexity Low_complexity 1 50 0 3 1166 595 231 0 0 chr13 76277075 76277192 -44007120 + ID_B1 SINE B4 108 224 0 3 1166 232 293 24 77 chr13 76277192 76277245 -44007067 - YREP_Mm Unknown Unknown -1522 290 130 3 1166 994 218 0 14 chr13 76277373 76277592 -44006720 - B3 SINE B2 0 216 1 3 1166 206 346 0 61 chr13 76278370 76278484 -44005828 + MIRb SINE MIR 99 205 -63 3 1166 786 22 0 0 chr13 76278665 76278757 -44005555 + (CACTT)n Simple_repeat Simple_repeat 3 94 0 3 1166 1140 74 55 0 chr13 76279614 76279777 -44004535 + B2_Mm2 SINE B2 24 195 0 3 1166 21 0 0 0 chr13 76279941 76279962 -44004350 + AT_rich Low_complexity Low_complexity 1 21 0 3 1166 375 245 28 9 chr13 76280045 76280152 -44004160 - Lx6 LINE L1 -164 7296 7188 3 1166 324 0 0 0 chr13 76280161 76280197 -44004115 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1166 746 198 112 6 chr13 76280201 76280379 -44003933 - Lx6 LINE L1 -372 7088 6892 3 1166 365 349 76 28 chr13 76281030 76281361 -44002951 - L2a LINE L2 0 3426 2939 3 1166 600 227 42 33 chr13 76283613 76283827 -44000485 - B3 SINE B2 0 216 1 3 1167 755 269 29 9 chr13 76284302 76284512 -43999800 + B3 SINE B2 1 214 -2 3 1167 21 36 0 0 chr13 76284800 76284828 -43999484 + AT_rich Low_complexity Low_complexity 1 28 0 3 1167 850 219 92 0 chr13 76285357 76285521 -43998791 - B3 SINE B2 -36 180 2 3 1167 513 47 0 0 chr13 76286618 76286682 -43997630 + (TCC)n Simple_repeat Simple_repeat 1 64 0 3 1167 21 71 0 0 chr13 76287795 76287837 -43996475 + AT_rich Low_complexity Low_complexity 1 42 0 3 1167 299 169 0 7 chr13 76288414 76288478 -43995834 + B1_Mur4 SINE Alu 89 150 0 3 1167 493 200 191 46 chr13 76288745 76288918 -43995394 + URR1B DNA MER1_type 1 198 -27 3 1167 209 353 0 0 chr13 76289476 76289544 -43994768 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1167 246 62 0 0 chr13 76289557 76289589 -43994723 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1167 478 296 16 0 chr13 76289623 76289748 -43994564 - B1_Mur1 SINE Alu -18 131 5 3 1167 476 296 51 32 chr13 76290770 76290927 -43993385 - MER5A1 DNA MER1_type 0 166 7 3 1167 554 215 46 9 chr13 76291300 76291408 -43992904 - PB1D7 SINE Alu -7 113 2 3 1167 1410 150 4 28 chr13 76291594 76291841 -43992471 - MTC LTR MaLR -106 315 75 3 1167 466 135 0 0 chr13 76291877 76291951 -43992361 - MTC LTR MaLR -347 74 1 3 1167 235 329 0 23 chr13 76292136 76292223 -43992089 + (CATATA)n Simple_repeat Simple_repeat 3 87 0 3 1167 357 24 0 0 chr13 76292232 76292274 -43992038 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1167 293 236 14 19 chr13 76292334 76292450 -43991862 - Lx4A LINE L1 -1217 5841 5726 3 1167 1276 265 46 20 chr13 76293580 76293931 -43990381 - MTEb LTR MaLR 0 379 20 3 1167 21 0 0 0 chr13 76294597 76294618 -43989694 + AT_rich Low_complexity Low_complexity 1 21 0 3 1167 304 271 0 0 chr13 76294963 76295059 -43989253 + A-rich Low_complexity Low_complexity 1 96 0 3 1167 1927 268 28 11 chr13 76295059 76295625 -43988687 - Lx7 LINE L1 -382 7314 6739 3 1167 336 161 0 0 chr13 76295625 76295687 -43988625 + (TGG)n Simple_repeat Simple_repeat 3 64 0 3 1167 4030 217 103 60 chr13 76295724 76296457 -43987855 - RMER12 LTR ERVK -4 1844 586 3 1167 2337 59 33 0 chr13 76296457 76296763 -43987549 + L1_Mus3 LINE L1 6317 6632 -6 3 1167 4030 206 102 66 chr13 76296763 76297332 -43986980 - RMER12 LTR ERVK -737 585 1 3 1167 507 224 32 64 chr13 76297335 76297492 -43986820 - Lx7 LINE L1 -948 6748 6597 3 1167 656 275 113 24 chr13 76297497 76297709 -43986603 + Lx7 LINE L1 6372 6602 -1094 3 1167 256 194 159 37 chr13 76297798 76297905 -43986407 - Lx8 LINE L1 -1304 6169 6050 4 1167 1534 198 101 9 chr13 76297907 76298254 -43986058 - RLTR30 LTR ERV1 0 379 1 4 1167 409 189 163 92 chr13 76298405 76298656 -43985656 - L1MCa LINE L1 -4603 1905 1637 4 1167 202 224 0 0 chr13 76298658 76298707 -43985605 + T-rich Low_complexity Low_complexity 1 49 0 4 1167 9371 104 16 18 chr13 76298713 76301209 -43983103 - Lx3B LINE L1 -5 6968 4478 4 1167 3550 98 79 0 chr13 76301205 76301786 -43982526 + Lx3B LINE L1 3831 4457 -1429 4 1167 1430 268 129 39 chr13 76301818 76302800 -43981512 - L1MCa LINE L1 -4873 1635 565 4 1167 352 301 45 48 chr13 76302857 76303171 -43981141 + L1MC LINE L1 2815 3127 -3019 4 1167 23733 49 0 0 chr13 76303174 76306273 -43978039 + L1Md_T LINE L1 2487 5586 -297 4 1167 8056 55 0 0 chr13 76306273 76307269 -43977043 + L1Md_T LINE L1 5587 6582 0 4 1167 10015 68 3 1 chr13 76307269 76308635 -43975677 + L1Md_F2 LINE L1 4216 5584 -299 4 1167 7017 74 44 3 chr13 76308637 76309582 -43974730 + L1Md_F2 LINE L1 5587 6570 -12 4 1167 485 261 63 27 chr13 76309848 76310105 -43974207 + L1MC LINE L1 3437 3710 -2436 4 1167 230 345 75 48 chr13 76310974 76311160 -43973152 - MIRb SINE MIR 0 268 78 4 1167 484 250 147 12 chr13 76311214 76311384 -43972928 - B3A SINE B2 -5 193 1 4 1167 389 186 47 0 chr13 76313087 76313173 -43971139 - MTE2a LTR MaLR 0 379 290 4 1167 595 261 275 14 chr13 76313173 76313464 -43970848 + ORR1D2 LTR MaLR 4 370 0 4 1167 747 250 16 11 chr13 76313464 76313646 -43970666 + ORR1D2-int LTR MaLR 1 183 -1187 4 1167 314 267 53 27 chr13 76313646 76313796 -43970516 + L1MC LINE L1 3557 3710 -2436 4 1167 1142 251 65 91 chr13 76313975 76314436 -43969876 + ORR1D2-int LTR MaLR 179 627 -743 4 1167 539 45 0 0 chr13 76314436 76314503 -43969809 - RLTR11A2 LTR ERVK -460 67 1 4 1167 279 289 24 5 chr13 76314866 76315004 -43969308 - L1M5 LINE L1 -727 5447 5307 4 1167 469 238 237 23 chr13 76315226 76315441 -43968871 + B4A SINE B4 2 262 -30 4 1167 270 0 0 0 chr13 76315467 76315497 -43968815 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1167 213 348 97 21 chr13 76315630 76315774 -43968538 - RSINE1 SINE B4 0 165 11 4 1167 633 195 18 0 chr13 76315667 76315780 -43968532 - B3 SINE B2 -100 116 2 4 1167 353 304 27 61 chr13 76316174 76316321 -43967991 - B4A SINE B4 0 292 151 4 1167 393 226 18 28 chr13 76316682 76316791 -43967521 - PB1D10 SINE Alu -9 108 1 4 1167 246 286 24 12 chr13 76316791 76316876 -43967436 - L1M5 LINE L1 -3394 2752 2667 4 1167 264 267 38 47 chr13 76317182 76317288 -43967024 - L1M5 LINE L1 -3778 2368 2264 4 1167 2956 79 9 5 chr13 76317688 76318107 -43966205 + BGLII LTR ERVK 1 421 0 4 1167 2432 129 41 24 chr13 76319397 76319811 -43964501 + Lx3B LINE L1 6550 6970 -3 4 1167 799 236 122 54 chr13 76319815 76320201 -43964111 - Lx7 LINE L1 -160 7536 7125 4 1167 205 315 89 20 chr13 76320575 76320721 -43963591 + L3 LINE CR1 3744 3899 -590 4 1167 23 0 0 0 chr13 76320945 76320968 -43963344 + AT_rich Low_complexity Low_complexity 1 23 0 4 1167 207 100 0 0 chr13 76321705 76321735 -43962577 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 4 1167 337 318 18 45 chr13 76321767 76321879 -43962433 - PB1D10 SINE Alu -8 109 1 4 1167 213 0 26 51 chr13 76322126 76322165 -43962147 + (TAA)n Simple_repeat Simple_repeat 1 38 0 4 1167 765 55 9 0 chr13 76322222 76322331 -43961981 + L1_Mus1 LINE L1 6458 6567 0 4 1167 22 0 0 0 chr13 76322748 76322770 -43961542 + AT_rich Low_complexity Low_complexity 1 22 0 4 1167 4092 51 55 4 chr13 76322968 76323496 -43960816 + L1_Mus2 LINE L1 6008 6562 -4 4 1167 829 145 19 13 chr13 76323815 76323969 -43960343 + RMER5 LTR ERV1 354 508 -26 4 1167 1247 150 28 7 chr13 76324114 76324554 -43959758 - RMER1B Other Other -11 1055 525 4 1167 619 222 34 27 chr13 76325229 76325377 -43958935 + B1_Mur1 SINE Alu 1 149 0 4 1167 841 174 14 0 chr13 76325602 76325740 -43958572 - B1_Mus1 SINE Alu -7 141 2 4 1167 29 28 0 0 chr13 76326228 76326264 -43958048 + AT_rich Low_complexity Low_complexity 1 36 0 4 1167 678 208 31 0 chr13 76326309 76326439 -43957873 + B1_Mur1 SINE Alu 5 138 -11 4 1167 227 244 222 0 chr13 76327612 76327702 -43956610 + L1_Rod LINE L1 5709 5818 -29 4 1167 315 282 102 8 chr13 76328352 76328470 -43955842 + MIRb SINE MIR 47 175 -93 4 1167 1413 90 75 9 chr13 76328586 76328794 -43955518 + MTC LTR MaLR 2 224 -197 4 1167 3244 88 39 7 chr13 76328794 76329251 -43955061 - MT2C_Mm LTR ERVL 0 475 4 4 1167 354 248 82 44 chr13 76329256 76329386 -43954926 - RLTR41 LTR ERV1 -1 445 306 4 1167 596 248 44 38 chr13 76330045 76330204 -43954108 - RMER20B LTR ERVK -467 160 1 4 1167 2282 246 139 23 chr13 76330281 76331220 -43953092 + Lx8 LINE L1 6161 7208 -265 4 1167 2054 196 81 5 chr13 76331225 76331667 -43952645 + RLTR28 LTR ERVL 23 498 -26 4 1167 1677 118 57 27 chr13 76332794 76333090 -43951222 - Lx LINE L1 0 6654 6350 4 1167 239 286 80 25 chr13 76333779 76333891 -43950421 + MIRc SINE MIR 9 119 -149 4 1167 204 333 168 26 chr13 76333929 76334120 -43950192 - MIRb SINE MIR -20 248 31 4 1167 1166 75 0 0 chr13 76335596 76335743 -43948569 + B1_Mm SINE Alu 1 147 0 4 1167 204 40 0 0 chr13 76335743 76335768 -43948544 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1167 2389 174 143 55 chr13 76335850 76336125 -43948187 - RMER20B LTR ERVK -2 625 307 4 1167 2893 32 0 6 chr13 76336125 76336472 -43947840 - L1Md_F3 LINE L1 -14 6570 6226 4 1167 2389 174 143 55 chr13 76336472 76336762 -43947550 - RMER20B LTR ERVK -321 306 10 4 1167 279 257 130 87 chr13 76336897 76337012 -43947300 - B4A SINE B4 0 292 173 4 1167 201 185 0 0 chr13 76337061 76337126 -43947186 + T-rich Low_complexity Low_complexity 1 65 0 4 1167 801 47 0 28 chr13 76337126 76337235 -43947077 - B1_Mm SINE Alu 0 147 42 4 1167 563 237 118 64 chr13 76337132 76337335 -43946977 - B4 SINE B4 -69 223 10 4 1167 334 232 144 0 chr13 76337367 76337492 -43946820 - L1M3 LINE L1 -960 5180 5038 4 1167 822 231 121 139 chr13 76338734 76339107 -43945205 + MTE2a LTR MaLR 9 374 -5 4 1167 6607 108 14 40 chr13 76339847 76341259 -43943053 + Lx LINE L1 5263 6644 -10 4 1167 36759 8 0 0 chr13 76341255 76346633 -43937679 + L1Md_A LINE L1 208 5586 -297 4 1167 9039 4 0 0 chr13 76346633 76347629 -43936683 + L1Md_A LINE L1 5587 6582 0 4 1167 189 226 0 0 chr13 76348292 76348376 -43935936 + T-rich Low_complexity Low_complexity 1 84 0 4 1167 1153 82 0 0 chr13 76348381 76348528 -43935784 - B1_Mm SINE Alu 0 147 1 4 1167 468 102 71 0 chr13 76349128 76349226 -43935086 + GA-rich Low_complexity Low_complexity 1 105 0 4 1167 312 120 0 0 chr13 76349463 76349513 -43934799 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1167 3334 40 5 2 chr13 76349634 76350033 -43934279 + MTB LTR MaLR 1 400 0 4 1167 235 333 10 61 chr13 76350279 76350378 -43933934 - MER5B DNA MER1_type -62 116 23 4 1167 793 182 0 51 chr13 76350954 76351110 -43933202 + B1_Mur2 SINE Alu 2 149 0 4 1167 25 65 0 0 chr13 76351709 76351755 -43932557 + AT_rich Low_complexity Low_complexity 1 46 0 4 1167 247 317 125 0 chr13 76351788 76351908 -43932404 - MER58B DNA MER1_type -90 251 117 4 1167 403 306 35 7 chr13 76352742 76352887 -43931425 + B1F2 SINE Alu 1 149 0 4 1167 486 276 140 6 chr13 76352979 76353143 -43931169 + MER20 DNA MER1_type 34 219 0 4 1167 1257 190 102 128 chr13 76353577 76353951 -43930361 - ORR1C2 LTR MaLR -18 366 3 4 1167 932 279 36 59 chr13 76353958 76354434 -43929878 - L1M2 LINE L1 -1280 4863 4399 4 1167 2035 213 59 72 chr13 76354605 76354627 -43929685 - Lx7 LINE L1 -257 7439 7421 4 1167 291 54 0 0 chr13 76354627 76354664 -43929648 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1167 2035 213 59 72 chr13 76354664 76355268 -43929044 - Lx7 LINE L1 -276 7420 6821 4 1167 1857 52 4 0 chr13 76355266 76355514 -43928798 - L1_Mus3 LINE L1 -365 6273 6025 4 1167 7405 74 22 8 chr13 76355516 76356868 -43927444 + L1_Mus3 LINE L1 5265 6638 0 4 1167 1693 161 136 31 chr13 76356868 76357259 -43927053 - RMER12 LTR ERVK -890 432 1 4 1167 1547 145 3 3 chr13 76357310 76357594 -43926718 + L1_Mur3 LINE L1 3635 3918 -1962 4 1167 245 59 0 0 chr13 76357602 76357636 -43926676 + L1_Mur3 LINE L1 4223 4256 -1624 4 1167 674 254 157 14 chr13 76357636 76357852 -43926460 + RLTR18 LTR ERVK 370 616 0 4 1167 1418 270 34 22 chr13 76357860 76358356 -43925956 + Lx6 LINE L1 5654 6155 -1305 4 1167 298 115 19 0 chr13 76358357 76358409 -43925903 + Lx6 LINE L1 6751 6803 -657 4 1167 363 130 13 25 chr13 76359547 76359613 -43924699 + (TAGA)n Simple_repeat Simple_repeat 1 67 0 4 1167 2175 109 32 0 chr13 76359613 76359926 -43924386 + ORR1A2 LTR MaLR 1 323 -4 4 1167 363 130 13 25 chr13 76359926 76359938 -43924374 + (TAGA)n Simple_repeat Simple_repeat 4 14 0 4 1167 1245 73 6 23 chr13 76360324 76360676 -43923636 + (TTTC)n Simple_repeat Simple_repeat 1 346 0 4 1167 689 88 0 10 chr13 76360676 76360779 -43923533 + (TTCC)n Simple_repeat Simple_repeat 4 105 0 4 1167 13373 94 13 6 chr13 76360797 76363850 -43920462 - Lx3A LINE L1 -14 6967 3894 4 1167 6993 80 44 15 chr13 76363848 76364962 -43919350 + Lx3A LINE L1 2743 3888 -1998 4 1167 231 260 0 58 chr13 76365269 76365331 -43918981 + ID4 SINE ID 25 83 0 4 1167 1526 52 5 5 chr13 76366678 76366871 -43917441 + B2_Mm1t SINE B2 1 193 0 4 1167 339 89 0 0 chr13 76366873 76366929 -43917383 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 4 1167 578 218 9 0 chr13 76367172 76367282 -43917030 - B1_Mur3 SINE Alu 0 149 39 4 1167 2204 104 3 66 chr13 76367433 76367782 -43916530 - ORR1A2 LTR MaLR 0 327 1 4 1167 10021 141 80 14 chr13 76367782 76369623 -43914689 - ORR1A2-int LTR MaLR 0 1963 1 4 1167 1967 102 5 149 chr13 76369623 76369703 -43914609 - ORR1A2 LTR MaLR 0 327 278 4 1167 1221 165 0 4 chr13 76369703 76369928 -43914384 - Lx LINE L1 0 6654 6431 4 1167 1967 102 5 149 chr13 76369928 76370229 -43914083 - ORR1A2 LTR MaLR -50 277 1 4 1167 497 120 0 12 chr13 76370238 76370297 -43914015 + (TCC)n Simple_repeat Simple_repeat 2 60 0 4 1167 1246 50 0 48 chr13 76370297 76370486 -43913826 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 1167 497 120 0 12 chr13 76370486 76370510 -43913802 + (TCC)n Simple_repeat Simple_repeat 2 25 0 4 1167 794 305 40 13 chr13 76370679 76371058 -43913254 - L1MA4 LINE L1 -364 5936 5548 4 1167 300 27 0 0 chr13 76371720 76371757 -43912555 + (CAA)n Simple_repeat Simple_repeat 2 38 0 4 1167 600 244 8 0 chr13 76371978 76372109 -43912203 + RSINE1 SINE B4 3 134 -31 5 1167 27 0 0 0 chr13 76372136 76372163 -43912149 + AT_rich Low_complexity Low_complexity 1 27 0 5 1167 1461 220 19 86 chr13 76372823 76373181 -43911131 + L1_Mur3 LINE L1 859 1192 -6536 5 1167 558 0 0 0 chr13 76373181 76373243 -43911069 + (GA)n Simple_repeat Simple_repeat 2 63 0 5 1167 5248 179 67 5 chr13 76373243 76374059 -43910253 + L1_Mur3 LINE L1 1193 2065 -3815 5 1167 180 0 0 0 chr13 76374059 76374079 -43910233 + (CCA)n Simple_repeat Simple_repeat 1 20 0 5 1167 5248 178 69 3 chr13 76374079 76374506 -43909806 + L1_Mur3 LINE L1 2066 2508 -3372 5 1167 361 344 124 13 chr13 76374951 76375104 -43909208 + LTR16B2 LTR ERVL 309 478 -2 5 1167 182 200 0 0 chr13 76375519 76375554 -43908758 + L2b LINE L2 3330 3364 -11 5 1167 275 224 30 0 chr13 76376089 76376156 -43908156 + CT-rich Low_complexity Low_complexity 3 71 0 5 1167 246 32 0 0 chr13 76376156 76376187 -43908125 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 1167 207 0 0 0 chr13 76376200 76376223 -43908089 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1167 630 26 0 0 chr13 76376223 76376298 -43908014 + (GA)n Simple_repeat Simple_repeat 2 77 0 5 1167 444 186 28 24 chr13 76376301 76376400 -43907912 - B1_Mur1 SINE Alu -42 107 1 5 1167 241 331 110 66 chr13 76376400 76376422 -43907890 - B4 SINE B4 -96 193 65 5 1167 216 0 0 0 chr13 76376748 76376772 -43907540 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1167 774 0 0 0 chr13 76376772 76376858 -43907454 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 1167 267 343 36 18 chr13 76377550 76377660 -43906652 + MIRc SINE MIR 33 144 -124 5 1167 21 0 0 0 chr13 76378302 76378323 -43905989 + AT_rich Low_complexity Low_complexity 1 21 0 5 1167 652 92 22 22 chr13 76378980 76379114 -43905198 + (TCTA)n Simple_repeat Simple_repeat 3 136 0 5 1167 3490 71 0 0 chr13 76379185 76379637 -43904675 - L1Md_T LINE L1 0 6582 6131 5 1167 189 0 0 0 chr13 76380235 76380256 -43904056 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 5 1167 266 65 15 46 chr13 76380268 76380333 -43903979 + (CAAA)n Simple_repeat Simple_repeat 2 64 0 5 1167 213 209 0 0 chr13 76380634 76380701 -43903611 + GA-rich Low_complexity Low_complexity 1 67 0 5 1167 28 0 0 0 chr13 76380778 76380806 -43903506 + AT_rich Low_complexity Low_complexity 1 28 0 5 1167 180 200 0 0 chr13 76380886 76380936 -43903376 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1167 391 309 62 62 chr13 76380937 76381099 -43903213 - RSINE1 SINE B4 -1 164 3 5 1167 743 216 7 13 chr13 76382471 76382621 -43901691 - B1_Mur3 SINE Alu 0 149 1 5 1167 275 294 220 0 chr13 76382677 76382786 -43901526 + MLT1A1 LTR MaLR 17 149 -259 5 1167 416 246 29 29 chr13 76382832 76382970 -43901342 + MLT1A1 LTR MaLR 270 407 -1 5 1167 257 0 0 29 chr13 76383451 76383485 -43900827 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 5 1167 238 87 21 21 chr13 76383865 76383912 -43900400 + (GGGAGA)n Simple_repeat Simple_repeat 3 49 0 5 1167 2041 179 143 13 chr13 76384027 76384607 -43899705 + Lx7 LINE L1 5526 6187 -1509 5 1167 245 219 27 14 chr13 76384652 76384726 -43899586 + Lx7 LINE L1 6172 6246 -1450 5 1167 255 184 154 26 chr13 76385212 76385290 -43899022 + RMER1C Other Other 1106 1193 -149 5 1167 532 145 164 86 chr13 76385518 76385646 -43898666 + B1_Mur2 SINE Alu 1 138 -11 5 1167 576 0 0 0 chr13 76385646 76385710 -43898602 + (CAAAA)n Simple_repeat Simple_repeat 2 65 0 5 1167 600 117 7 33 chr13 76385937 76386087 -43898225 + (TG)n Simple_repeat Simple_repeat 1 146 0 5 1167 365 254 70 0 chr13 76386702 76386816 -43897496 + L1M5 LINE L1 5544 5665 -459 5 1167 380 250 40 0 chr13 76387211 76387287 -43897025 + PB1D10 SINE Alu 3 81 -36 5 1167 341 247 13 0 chr13 76387587 76387664 -43896648 - ID4 SINE ID -2 81 4 5 1167 339 301 18 9 chr13 76387664 76387778 -43896534 - PB1D10 SINE Alu 0 117 3 5 1167 183 80 0 0 chr13 76388293 76388318 -43895994 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1167 802 80 0 43 chr13 76388466 76388583 -43895729 + B1_Mus2 SINE Alu 36 147 0 5 1167 1579 155 162 12 chr13 76389401 76389651 -43894661 - ORR1C2 LTR MaLR 0 384 98 5 1167 1169 102 148 0 chr13 76389651 76389847 -43894465 - URR1A DNA MER1_type -1 225 1 5 1167 1579 155 162 12 chr13 76389847 76389930 -43894382 - ORR1C2 LTR MaLR -287 97 1 5 1167 852 280 84 8 chr13 76390278 76390516 -43893796 + B4A SINE B4 21 276 -16 5 1167 441 0 0 0 chr13 76390517 76390566 -43893746 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1167 181 380 40 10 chr13 76390703 76390804 -43893508 - MIRm SINE MIR -97 179 76 5 1167 400 336 63 71 chr13 76391494 76391747 -43892565 + MLT1F1 LTR MaLR 308 567 -2 5 1167 387 0 0 0 chr13 76391984 76392027 -43892285 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 1167 209 189 0 0 chr13 76393104 76393141 -43891171 + C-rich Low_complexity Low_complexity 1 37 0 5 1167 894 107 20 0 chr13 76393153 76393303 -43891009 + (GA)n Simple_repeat Simple_repeat 1 153 0 5 1167 246 316 86 26 chr13 76393596 76393713 -43890599 + LTR16A LTR ERVL 8 131 -320 5 1167 280 302 42 33 chr13 76394430 76394560 -43889752 - PB1D9 SINE Alu -22 127 1 5 1167 394 275 24 48 chr13 76394560 76394613 -43889699 - B4 SINE B4 -209 83 34 5 1167 292 323 101 19 chr13 76394605 76394763 -43889549 + MLT1L LTR MaLR 426 596 -14 5 1167 306 125 0 0 chr13 76394810 76394858 -43889454 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1167 191 325 39 55 chr13 76395067 76395194 -43889118 + MER5A DNA MER1_type 63 187 -2 5 1167 1444 171 39 105 chr13 76396743 76397182 -43887130 + RMER17C LTR ERVK 1 410 0 5 1167 1143 141 76 19 chr13 76397296 76397506 -43886806 + RLTR17 LTR ERVK 3 224 -468 5 1167 606 140 224 0 chr13 76397494 76397637 -43886675 + RLTR17 LTR ERVK 518 692 0 5 1167 180 0 0 0 chr13 76397703 76397723 -43886589 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 5 1167 605 161 2 52 chr13 76397756 76397902 -43886410 + RMER3D-int LTR ERVK 653 773 -2069 5 1167 312 137 0 0 chr13 76397977 76398028 -43886284 + RMER3D-int LTR ERVK 490 540 -2302 5 1167 3432 177 56 67 chr13 76398073 76398998 -43885314 + RMER3D-int LTR ERVK 1075 1989 -853 5 1167 659 290 37 107 chr13 76399666 76399874 -43884438 + MLT1B LTR MaLR 5 209 -181 5 1167 387 0 0 0 chr13 76399874 76399917 -43884395 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1167 600 14 0 0 chr13 76399917 76399985 -43884327 + (GA)n Simple_repeat Simple_repeat 1 69 0 5 1167 659 290 37 107 chr13 76399985 76400130 -43884182 + MLT1B LTR MaLR 210 333 -57 5 1167 549 0 0 0 chr13 76400467 76400528 -43883784 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1167 3774 160 15 34 chr13 76401031 76401718 -43882594 + Lx4A LINE L1 6385 7058 0 5 1167 1647 123 40 77 chr13 76401815 76402141 -43882171 - Lx LINE L1 0 6654 6341 5 1167 1913 80 77 0 chr13 76402141 76402428 -43881884 + Lx LINE L1 5908 6216 -438 5 1167 771 140 0 40 chr13 76402440 76402589 -43881723 - L1Md_F2 LINE L1 0 6582 6440 5 1167 340 233 56 0 chr13 76402634 76402724 -43881588 - MLT1C LTR MaLR -332 135 41 5 1167 272 340 9 19 chr13 76403192 76403297 -43881015 + L2a LINE L2 3291 3394 -32 5 1167 29 28 0 0 chr13 76406244 76406280 -43878032 + AT_rich Low_complexity Low_complexity 1 36 0 5 1167 973 164 124 5 chr13 76407347 76407549 -43876763 + URR1A DNA MER1_type 1 226 0 5 1167 21 0 0 0 chr13 76408525 76408546 -43875766 + AT_rich Low_complexity Low_complexity 1 21 0 5 1167 186 301 157 17 chr13 76410132 76410247 -43874065 + MIRb SINE MIR 19 149 -119 5 1167 207 0 0 0 chr13 76410501 76410524 -43873788 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1167 427 271 18 36 chr13 76410524 76410635 -43873677 - PB1D10 SINE Alu -8 109 1 5 1167 264 224 0 0 chr13 76410758 76410825 -43873487 + (CA)n Simple_repeat Simple_repeat 2 68 0 5 1167 1893 63 0 8 chr13 76411224 76411464 -43872848 - L1_Mus1 LINE L1 0 6567 6330 5 1167 21 0 0 0 chr13 76411774 76411795 -43872517 + AT_rich Low_complexity Low_complexity 1 21 0 5 1167 25 0 0 0 chr13 76412245 76412270 -43872042 + AT_rich Low_complexity Low_complexity 1 25 0 5 1167 3735 277 101 48 chr13 76412339 76413738 -43870574 - Lx8 LINE L1 -146 7327 5846 5 1167 1537 200 55 33 chr13 76413738 76414100 -43870212 - ORR1D2 LTR MaLR 0 370 1 5 1167 3735 256 36 28 chr13 76414100 76414539 -43869773 - Lx8 LINE L1 -1628 5845 5395 5 1167 2407 241 63 61 chr13 76414541 76414719 -43869593 - Lx8 LINE L1 -894 4986 4825 5 1167 414 0 0 0 chr13 76414719 76414765 -43869547 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 5 145 2407 241 63 61 chr13 76414765 76415216 -43869096 - Lx8 LINE L1 -1056 4824 4368 5 1168 468 35 0 0 chr13 76415216 76415274 -43869038 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1168 2407 241 63 61 chr13 76415274 76415672 -43868640 - Lx8 LINE L1 -1513 4367 3956 5 1168 377 123 31 0 chr13 76416206 76416271 -43868041 + B1_Mur4 SINE Alu 84 150 0 5 1168 1419 139 171 6 chr13 76417156 76417495 -43866817 - RMER17C LTR ERVK 0 410 16 5 1168 24 77 0 0 chr13 76418470 76418522 -43865790 + AT_rich Low_complexity Low_complexity 1 52 0 5 1168 657 245 53 24 chr13 76418637 76418846 -43865466 - B3 SINE B2 0 216 2 5 1168 4200 33 0 0 chr13 76419000 76419482 -43864830 + LTRIS_Mm LTR ERV1 1 482 0 5 1168 2169 284 73 3 chr13 76419485 76420166 -43864146 - Lx8 LINE L1 -417 7056 6328 5 1168 624 278 180 21 chr13 76421258 76421574 -43862738 - ORR1D2 LTR MaLR -4 366 1 5 1168 2046 208 146 24 chr13 76421985 76422518 -43861794 + RMER19B LTR ERVK 305 902 0 5 1168 5323 171 69 36 chr13 76422518 76423661 -43860651 + MurERV4_19-int LTR ERVK 1 1181 -4599 5 1168 5701 83 31 11 chr13 76423664 76424513 -43859799 - Lx3_Mus LINE L1 -224 6785 5920 5 1168 1361 142 17 8 chr13 76424528 76424763 -43859549 + Lx3_Mus LINE L1 6773 7009 0 5 1168 21894 142 55 55 chr13 76424778 76429328 -43854984 + MurERV4_19-int LTR ERVK 1200 5759 -21 5 1168 207 0 0 0 chr13 76429328 76429351 -43854961 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1168 613 178 18 36 chr13 76429351 76429462 -43854850 - PB1D9 SINE Alu -10 110 2 5 1168 21894 142 55 55 chr13 76429462 76429492 -43854820 + MurERV4_19-int LTR ERVK 5760 5779 -1 5 1168 1805 231 54 54 chr13 76429516 76430001 -43854311 + RMER19C LTR ERVK 126 610 -1 5 1168 28 48 0 0 chr13 76431223 76431265 -43853047 + AT_rich Low_complexity Low_complexity 1 42 0 5 1168 554 287 87 69 chr13 76431711 76432135 -43852177 + BGLII_B LTR ERVK 10 412 -10 5 1168 284 306 41 14 chr13 76432797 76432808 -43851504 - B4 SINE B4 -130 162 88 5 1168 364 242 0 0 chr13 76432808 76432870 -43851442 - PB1D9 SINE Alu -56 64 3 5 1168 3338 178 53 24 chr13 76432870 76433483 -43850829 - ORR1B1-int LTR MaLR -860 649 16 5 1168 1607 219 149 25 chr13 76433483 76433932 -43850380 - RLTR16 LTR ERVK 0 505 1 6 1168 3338 178 53 24 chr13 76433932 76433947 -43850365 - ORR1B1-int LTR MaLR -1494 15 1 5 1168 1533 180 128 28 chr13 76433947 76433980 -43850332 - ORR1B1 LTR MaLR 0 394 368 5 1168 3044 85 60 2 chr13 76433980 76434393 -43849919 + RLTR9B LTR ERVK 1 437 0 6 1168 1533 186 124 30 chr13 76434393 76434717 -43849595 - ORR1B1 LTR MaLR -27 367 2 5 1168 1631 289 12 16 chr13 76434729 76435170 -43849142 - Lx8 LINE L1 -771 6702 6269 6 1168 525 32 0 0 chr13 76435170 76435233 -43849079 + (ATG)n Simple_repeat Simple_repeat 2 64 0 6 1168 1631 289 12 16 chr13 76435233 76435294 -43849018 - Lx8 LINE L1 -1205 6268 6204 6 1168 586 194 161 0 chr13 76435390 76435514 -43848798 - B1_Mus1 SINE Alu -4 144 1 6 1168 2136 141 8 14 chr13 76435660 76436021 -43848291 - RLTR15 LTR ERVK 0 359 1 6 1168 305 304 17 51 chr13 76436043 76436187 -43848125 - Lx8 LINE L1 -1659 5985 5839 6 1168 1911 152 153 6 chr13 76436189 76436554 -43847758 + MTC LTR MaLR 1 419 -2 6 1168 606 335 19 0 chr13 76436556 76436771 -43847541 + Lx8 LINE L1 6963 7181 -292 6 1168 3117 65 8 2 chr13 76437637 76438035 -43846277 - MTB LTR MaLR 0 400 1 6 1168 326 304 119 35 chr13 76438472 76438615 -43845697 - MLT1K LTR MaLR -239 356 202 6 1168 516 45 0 0 chr13 76439935 76440002 -43844310 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 6 1168 558 0 0 0 chr13 76441283 76441345 -43842967 + (CA)n Simple_repeat Simple_repeat 2 63 0 6 1168 372 313 19 67 chr13 76441407 76441616 -43842696 - Lx9 LINE L1 -317 7327 7129 6 1168 206 271 85 0 chr13 76441673 76441732 -43842580 - L2c LINE L2 -306 3081 3018 6 1168 473 17 0 127 chr13 76442554 76442751 -43841561 + (TGGGGG)n Simple_repeat Simple_repeat 3 174 0 6 1168 213 380 87 81 chr13 76443912 76444258 -43840054 + L2b LINE L2 2976 3323 -52 6 1168 490 268 134 32 chr13 76446314 76446530 -43837782 - MLT1J2 LTR MaLR -207 241 4 6 1168 706 266 107 41 chr13 76446828 76447098 -43837214 + MLT1C LTR MaLR 51 338 -129 6 1168 255 31 0 0 chr13 76447535 76447567 -43836745 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1168 499 254 31 31 chr13 76447573 76447703 -43836609 - B1_Mur2 SINE Alu -17 132 3 6 1168 785 311 20 51 chr13 76447761 76448015 -43836297 + B4A SINE B4 47 292 0 6 1168 5313 162 27 12 chr13 76448683 76449578 -43834734 + RMER13B LTR ERVK 1 908 0 6 1168 306 358 155 36 chr13 76449683 76450071 -43834241 - L1MC4a LINE L1 -1936 5946 5513 6 1168 195 129 0 0 chr13 76451149 76451180 -43833132 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1168 6655 85 5 10 chr13 76451185 76452544 -43831768 - L1_Mus1 LINE L1 -1 6566 5220 6 1168 1738 213 70 45 chr13 76452544 76452942 -43831370 - MTD LTR MaLR 0 419 12 6 1168 203 230 124 48 chr13 76453537 76453642 -43830670 - L2b LINE L2 -296 3079 2967 6 1168 29 47 0 0 chr13 76453780 76453823 -43830489 + AT_rich Low_complexity Low_complexity 1 43 0 6 1168 240 244 177 8 chr13 76453988 76454112 -43830200 - L1MB4 LINE L1 -33 6147 6003 6 1168 2091 207 10 15 chr13 76454116 76454523 -43829789 - MTD LTR MaLR -7 412 8 6 1168 1428 277 26 43 chr13 76454530 76455115 -43829197 - L1MB4 LINE L1 -175 6005 5431 6 1168 224 346 27 78 chr13 76455596 76455741 -43828571 + MIRb SINE MIR 14 158 -110 6 1168 206 341 12 0 chr13 76455884 76455966 -43828346 + GA-rich Low_complexity Low_complexity 1 83 0 6 1168 1025 207 14 14 chr13 76457276 76457496 -43826816 + MTD LTR MaLR 1 220 -199 6 1168 447 86 77 0 chr13 76457564 76457638 -43826674 + ORR1C2 LTR MaLR 21 100 -278 6 1168 1986 47 4 0 chr13 76457639 76457897 -43826415 - L1Md_F2 LINE L1 -675 5907 5649 6 1168 4761 89 19 8 chr13 76457897 76458566 -43825746 + L1Md_F2 LINE L1 5906 6582 0 6 1168 529 172 91 0 chr13 76458566 76458665 -43825647 + ORR1C2 LTR MaLR 98 205 -179 6 1168 317 28 0 152 chr13 76458666 76458837 -43825475 + (CAGGA)n Simple_repeat Simple_repeat 1 145 0 6 1168 568 196 10 0 chr13 76458848 76458945 -43825367 + Lx6 LINE L1 7069 7166 -294 6 1168 684 251 6 12 chr13 76459059 76459224 -43825088 + ORR1C2 LTR MaLR 202 365 -19 6 1168 1168 197 48 75 chr13 76459260 76459633 -43824679 + MTD-int LTR MaLR 896 1258 0 6 1168 1861 172 125 8 chr13 76459633 76460008 -43824304 + MTD LTR MaLR 1 419 0 6 1168 245 260 123 0 chr13 76460784 76460857 -43823455 + ID4_ SINE ID 2 83 0 6 1168 412 244 0 12 chr13 76460868 76460951 -43823361 + B4 SINE B4 5 86 -206 6 1168 281 268 0 165 chr13 76460967 76461027 -43823285 + B4 SINE B4 216 266 -26 6 1168 492 86 0 0 chr13 76461027 76461097 -43823215 + (CA)n Simple_repeat Simple_repeat 1 70 0 6 1168 281 268 0 165 chr13 76461097 76461121 -43823191 + B4 SINE B4 267 286 -6 6 1168 202 180 33 0 chr13 76461134 76461195 -43823117 + GA-rich Low_complexity Low_complexity 4 66 0 6 1168 554 314 30 30 chr13 76461247 76461411 -43822901 + MER5A DNA MER1_type 1 164 -25 6 1168 1076 172 108 0 chr13 76461493 76461697 -43822615 + URR1A DNA MER1_type 1 226 0 6 1168 906 270 95 64 chr13 76461777 76462336 -43821976 - Lx8 LINE L1 -28 7445 6870 6 1168 6102 102 6 1 chr13 76462486 76463343 -43820969 - L1_Mus3 LINE L1 -8 6630 5770 6 1168 1494 116 8 4 chr13 76463344 76463586 -43820726 + L1VL1 LINE L1 24 266 -6156 6 1168 12415 137 13 1 chr13 76463614 76465806 -43818506 - L1_Mm LINE L1 -1998 3885 1668 6 1168 734 168 243 12 chr13 76465860 76466029 -43818283 - B3 SINE B2 -6 210 3 6 1168 301 358 48 64 chr13 76468204 76468455 -43815857 - MIR SINE MIR -10 252 6 6 1168 939 219 50 0 chr13 76468967 76469168 -43815144 + B3 SINE B2 1 211 -5 6 1168 1888 18 4 4 chr13 76470259 76470485 -43813827 - L1Md_F3 LINE L1 -2 6582 6357 6 1168 288 265 47 7 chr13 76471529 76471677 -43812635 - L1MA8 LINE L1 -208 6083 5930 6 1168 338 243 241 35 chr13 76471741 76471882 -43812430 - L2 LINE L2 -467 2952 2783 6 1168 1390 334 76 14 chr13 76471908 76472397 -43811915 + MLT2B3 LTR ERVL 1 519 -35 6 1168 222 309 20 49 chr13 76472466 76472568 -43811744 - L2 LINE L2 -660 2759 2661 6 1168 722 199 5 87 chr13 76473344 76473528 -43810784 + MT2B LTR ERVL 157 287 -314 6 1168 7202 127 39 10 chr13 76473487 76474698 -43809614 + ORR1A2-int LTR MaLR 718 1963 0 6 1168 2188 117 3 60 chr13 76474698 76475045 -43809267 + ORR1A2 LTR MaLR 1 327 0 6 1168 637 174 6 170 chr13 76475136 76475295 -43809017 + B1_Mur4 SINE Alu 18 150 0 6 1168 180 346 0 0 chr13 76476463 76476515 -43807797 + L2c LINE L2 3299 3350 -37 6 1168 189 321 45 56 chr13 76476719 76476808 -43807504 - MIRc SINE MIR -106 162 75 6 1168 2312 161 87 54 chr13 76476899 76477384 -43806928 + ORR1A2-int LTR MaLR 1462 1962 -1 6 1168 1590 130 59 0 chr13 76477384 76477637 -43806675 + ORR1A2 LTR MaLR 1 268 -59 6 1168 2285 155 60 44 chr13 76477640 76478188 -43806124 + L1_Mur3 LINE L1 2620 3176 -2704 6 1168 9115 118 18 17 chr13 76478230 76479952 -43804360 - L1_Mus3 LINE L1 -603 6035 4329 6 1168 23 33 0 0 chr13 76479952 76479982 -43804330 + AT_rich Low_complexity Low_complexity 1 30 0 6 1168 2156 101 61 6 chr13 76479982 76480310 -43804002 - L1_Mus3 LINE L1 -7 6631 6286 6 1168 978 187 39 68 chr13 76480310 76480620 -43803692 + L1_Mur3 LINE L1 5141 5441 -439 6 1168 356 125 400 0 chr13 76480658 76480738 -43803574 - Lx7 LINE L1 -956 6740 6629 6 1168 2482 194 53 6 chr13 76480776 76481273 -43803039 + Lx7 LINE L1 6780 7293 -403 6 1168 351 0 0 0 chr13 76481273 76481312 -43803000 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1168 2482 194 53 6 chr13 76481312 76481359 -43802953 + Lx7 LINE L1 7294 7350 -346 6 1168 513 0 0 0 chr13 76481612 76481669 -43802643 + (TTA)n Simple_repeat Simple_repeat 1 57 0 6 1168 2350 63 41 0 chr13 76481669 76481988 -43802324 - L1Md_F2 LINE L1 -23 6559 6228 6 1168 224 341 60 12 chr13 76482042 76482125 -43802187 + RSINE1 SINE B4 3 89 -76 6 1168 493 182 49 81 chr13 76482380 76482565 -43801747 - Lx9 LINE L1 -7 7637 7459 6 1168 749 181 6 34 chr13 76482551 76482728 -43801584 - Lx9 LINE L1 -130 7514 7343 6 1168 32720 73 23 7 chr13 76483138 76488482 -43795830 + L1Md_F2 LINE L1 220 5589 -297 6 1168 7745 51 19 4 chr13 76488483 76489463 -43794849 + L1Md_F2 LINE L1 5591 6585 0 6 1168 580 196 115 16 chr13 76489745 76489937 -43794375 - Lx9 LINE L1 0 7644 7434 6 1168 6884 68 4 3 chr13 76490120 76491055 -43793257 - L1_Mus2 LINE L1 0 6566 5631 6 1168 7053 94 6 1 chr13 76491050 76492092 -43792220 + L1_Mus2 LINE L1 4558 5604 -279 6 1168 1229 160 110 196 chr13 76492201 76492620 -43791692 + ORR1C2 LTR MaLR 1 383 -1 6 1168 618 231 0 84 chr13 76492678 76492820 -43791492 - B1_Mur3 SINE Alu -19 130 1 6 1168 331 335 99 12 chr13 76493288 76493460 -43790852 - MLT1C LTR MaLR 0 467 281 6 1168 2711 212 60 41 chr13 76493657 76494652 -43789660 + Lx9 LINE L1 5021 6065 -1579 6 1168 1277 236 45 6 chr13 76494654 76494966 -43789346 + Lx9 LINE L1 6361 6684 -960 6 1168 414 229 184 5 chr13 76494972 76495095 -43789217 + Lx9 LINE L1 7369 7512 -132 6 1168 300 102 0 0 chr13 76495095 76495144 -43789168 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1168 414 229 184 5 chr13 76495144 76495226 -43789086 + Lx9 LINE L1 7513 7610 -34 6 1168 445 248 41 172 chr13 76495501 76495709 -43788603 + L1MA4A LINE L1 4960 5101 -1042 6 1168 955 144 0 0 chr13 76495709 76495855 -43788457 + B1_Mur4 SINE Alu 3 148 -2 6 1168 946 275 104 34 chr13 76495855 76496713 -43787599 + L1MA4A LINE L1 5102 6021 -279 6 1168 633 27 0 0 chr13 76496958 76497033 -43787279 + (GA)n Simple_repeat Simple_repeat 2 76 0 6 1168 378 167 0 0 chr13 76497737 76497821 -43786491 + GA-rich Low_complexity Low_complexity 1 84 0 6 1168 231 114 0 0 chr13 76497938 76497973 -43786339 + (AGGGGG)n Simple_repeat Simple_repeat 3 37 0 6 1168 510 164 0 0 chr13 76498745 76498867 -43785445 + GA-rich Low_complexity Low_complexity 1 122 0 6 1168 225 0 0 0 chr13 76499460 76499485 -43784827 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 6 1168 1002 150 21 0 chr13 76499485 76499672 -43784640 - Lx2 LINE L1 -32 6965 6775 6 1168 2157 88 58 3 chr13 76499670 76500000 -43784312 - Lx2 LINE L1 -352 6645 6298 6 1168 764 91 41 0 chr13 76500000 76500121 -43784191 - Lx2 LINE L1 -700 6297 6172 1 1168 1730 269 72 110 chr13 76500161 76501147 -43783165 + RMER17B LTR ERVK 5 899 -9 2 1168 2571 105 5 0 chr13 76501159 76501540 -43782772 + Lx3C LINE L1 6277 6659 -317 3 1168 6391 83 27 2 chr13 76501545 76502531 -43781781 - MusHAL1 LINE L1 -436 2276 1266 4 1168 504 261 11 52 chr13 76502782 76502956 -43781356 + RNLTR23 LTR ERVK 476 642 0 5 1168 8210 82 13 8 chr13 76502956 76504699 -43779613 - L1VL4 LINE L1 -1441 2118 366 6 1168 207 0 0 0 chr13 76504948 76504971 -43779341 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1168 935 48 103 0 chr13 76504973 76505099 -43779213 - B1_Mm SINE Alu -7 140 2 8 1168 238 282 117 9 chr13 76505271 76505382 -43778930 - RMER15 LTR ERVL 0 575 453 9 1168 226 345 121 70 chr13 76505735 76505950 -43778362 + MLT1E2 LTR MaLR 129 354 -273 1 1168 1619 208 3 6 chr13 76506059 76506374 -43777938 - ETnERV2-int LTR ERVK -442 6964 6651 1 1168 339 322 0 16 chr13 76506610 76506733 -43777579 - RodERV21-int LTR ERV1 -434 4557 4437 1 1168 396 288 0 17 chr13 76506637 76506757 -43777555 - ETnERV2-int LTR ERVK -313 6606 6489 1 1168 398 123 0 0 chr13 76506859 76506924 -43777388 + L1_Mm LINE L1 4282 4346 -1537 1 1168 216 0 0 0 chr13 76507146 76507170 -43777142 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1 1168 996 182 6 0 chr13 76507753 76507934 -43776378 - RMER16-int LTR ERVK -1430 3976 3795 1 1168 3386 200 3 7 chr13 76507970 76508656 -43775656 - ETnERV2-int LTR ERVK -1599 5807 5125 1 1168 257 158 0 0 chr13 76508656 76508694 -43775618 + RLTR13D3 LTR ERVK 1 38 -1076 1 1168 755 213 0 7 chr13 76508722 76508864 -43775448 - ETnERV2-int LTR ERVK -2872 4534 4394 1 1168 231 204 0 58 chr13 76508868 76508920 -43775392 + 4.5SRNA scRNA scRNA 38 86 -8 1 1168 684 88 0 19 chr13 76508875 76508979 -43775333 + B1_Mm SINE Alu 45 146 -1 1 1168 244 130 29 0 chr13 76508984 76509053 -43775259 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 1 1168 1342 248 29 25 chr13 76509055 76509597 -43774715 - ETnERV2-int LTR ERVK -3041 4365 4087 1 1168 2408 204 12 26 chr13 76509619 76510209 -43774103 - ETnERV2-int LTR ERVK -2567 2839 2303 1 1168 2528 183 23 83 chr13 76510211 76510813 -43773499 - ETnERV2-int LTR ERVK -4660 2746 2181 2 1168 1143 82 6 0 chr13 76510813 76510971 -43773341 + L1_Mus1 LINE L1 6409 6567 0 2 1168 1734 213 51 6 chr13 76511254 76511604 -43772708 + MTD LTR MaLR 1 366 -53 2 1168 1075 102 12 0 chr13 76511614 76511780 -43772532 - ETnERV2-int LTR ERVK -5219 2187 2020 2 1168 3938 102 0 19 chr13 76511780 76512211 -43772101 - L1_Mm LINE L1 -3345 2538 2112 2 1168 1045 96 0 0 chr13 76512211 76512346 -43771966 + B1_Mm SINE Alu 1 135 -12 2 1168 1069 13 50 0 chr13 76512352 76512511 -43771801 + (GA)n Simple_repeat Simple_repeat 2 168 0 2 1168 3938 102 0 19 chr13 76512511 76512710 -43771602 - L1_Mm LINE L1 -3772 2111 1913 2 1168 314 261 0 11 chr13 76512774 76512867 -43771445 - L1VL2 LINE L1 -6150 185 94 2 1168 681 109 30 0 chr13 76512869 76512970 -43771342 - ETnERV2-int LTR ERVK -5096 1041 938 2 1168 2072 158 140 39 chr13 76512975 76513488 -43770824 - ETnERV2-int LTR ERVK -4587 819 255 2 1168 1179 92 0 0 chr13 76513878 76514105 -43770207 + (TTC)n Simple_repeat Simple_repeat 1 227 0 2 1168 231 377 110 70 chr13 76514156 76514384 -43769928 + MLT1J LTR MaLR 13 249 -263 2 1168 210 107 0 0 chr13 76514385 76514413 -43769899 + (TCCC)n Simple_repeat Simple_repeat 2 29 0 2 1168 452 61 15 0 chr13 76514413 76514430 -43769882 + (TTTC)n Simple_repeat Simple_repeat 1 17 0 3 1168 1248 91 0 0 chr13 76514430 76514606 -43769706 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 3 1168 452 61 15 0 chr13 76514606 76514654 -43769658 + (TTTC)n Simple_repeat Simple_repeat 4 52 0 3 1168 247 291 0 95 chr13 76514654 76514749 -43769563 + MLT1J LTR MaLR 227 312 -200 2 1168 331 315 13 71 chr13 76514728 76514882 -43769430 + MT2B LTR ERVL 132 276 -325 3 1168 731 220 0 21 chr13 76514767 76514911 -43769401 + B1_Mm SINE Alu 6 146 -1 3 1168 267 338 138 31 chr13 76515327 76515486 -43768826 - LTR16C LTR ERVL -2 487 312 3 1168 553 255 192 26 chr13 76515979 76516172 -43768140 + RMER15 LTR ERVL 337 561 -14 3 1168 207 0 0 0 chr13 76517264 76517287 -43767025 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1168 200 339 49 41 chr13 76517318 76517441 -43766871 + MIRb SINE MIR 27 150 -118 3 1168 397 273 115 50 chr13 76517573 76517653 -43766659 - RLTR20C LTR ERVK -12 566 478 3 1168 513 0 0 0 chr13 76517653 76517710 -43766602 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1168 758 11 11 0 chr13 76517710 76517800 -43766512 + (GA)n Simple_repeat Simple_repeat 2 93 0 4 1168 970 220 79 72 chr13 76517800 76518161 -43766151 - RLTR20C LTR ERVK -213 365 1 3 1168 1071 176 17 68 chr13 76518162 76518399 -43765913 - URR1B DNA MER1_type 0 225 1 4 1168 297 0 0 0 chr13 76519153 76519186 -43765126 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1168 475 287 45 29 chr13 76519202 76519421 -43764891 - B4A SINE B4 0 292 26 4 1168 654 25 0 0 chr13 76519620 76519700 -43764612 + (CA)n Simple_repeat Simple_repeat 2 81 0 4 1168 24 0 0 0 chr13 76519720 76519744 -43764568 + AT_rich Low_complexity Low_complexity 1 24 0 4 1168 248 182 82 100 chr13 76519750 76519860 -43764452 - Lx8 LINE L1 -8 7465 7358 4 1168 1019 89 20 0 chr13 76519893 76520039 -43764273 - ORR1A1 LTR MaLR 0 346 198 4 1168 316 270 16 0 chr13 76520030 76520093 -43764219 + RMER30 DNA MER1_type 136 199 -3 4 1168 325 216 237 19 chr13 76520398 76520554 -43763758 + MER53 DNA hAT 2 191 -2 5 1168 358 250 0 0 chr13 76520649 76520725 -43763587 + L2b LINE L2 3294 3369 -6 5 1168 216 0 0 0 chr13 76521878 76521902 -43762410 + (CCG)n Simple_repeat Simple_repeat 2 25 0 5 1168 324 0 0 0 chr13 76522770 76522806 -43761506 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1168 1196 180 253 151 chr13 76523964 76524442 -43759870 - MT2A LTR ERVL 0 533 7 5 1168 306 357 84 7 chr13 76524642 76524821 -43759491 - MIRb SINE MIR -45 223 22 5 1168 324 64 0 0 chr13 76524920 76524967 -43759345 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 5 1168 1010 138 6 0 chr13 76525723 76525897 -43758415 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 5 1168 720 109 15 15 chr13 76526066 76526197 -43758115 + (GGAA)n Simple_repeat Simple_repeat 3 133 0 5 1168 26 0 0 0 chr13 76527383 76527409 -43756903 + AT_rich Low_complexity Low_complexity 1 26 0 5 1168 603 318 159 15 chr13 76527556 76527827 -43756485 + RCHARR1 DNA MER1_type 3 312 -662 6 1168 657 181 0 0 chr13 76528384 76528522 -43755790 + (TG)n Simple_repeat Simple_repeat 1 138 0 6 1168 365 285 104 39 chr13 76528548 76528807 -43755505 - B4A SINE B4 -16 276 1 6 1168 24 0 0 0 chr13 76528812 76528836 -43755476 + AT_rich Low_complexity Low_complexity 1 24 0 6 1168 612 215 124 35 chr13 76530030 76530232 -43754080 + MER33 DNA MER1_type 30 249 -75 6 1168 212 122 0 24 chr13 76532519 76532561 -43751751 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1168 771 268 6 0 chr13 76532597 76532754 -43751558 + RSINE1 SINE B4 8 165 0 6 1168 355 251 231 13 chr13 76532780 76533018 -43751294 - L1MA5 LINE L1 -73 6227 5938 6 1168 3431 123 4 9 chr13 76534403 76534944 -43749368 + L1VL4 LINE L1 230 767 -5535 6 1168 2092 74 10 0 chr13 76534941 76535239 -43749073 - L1_Mus4 LINE L1 -681 5955 5655 6 1168 4268 88 71 6 chr13 76535243 76535943 -43748369 + L1_Mus4 LINE L1 5948 6636 0 6 1168 16084 160 24 7 chr13 76535943 76539225 -43745087 + L1_Mus1 LINE L1 1120 4459 -1424 7 1168 1123 90 0 0 chr13 76539225 76539369 -43744943 + B1_Mus1 SINE Alu 3 146 -2 7 1168 7500 66 2 0 chr13 76539379 76540526 -43743786 + L1_Mus1 LINE L1 5419 6567 0 7 1168 252 143 0 0 chr13 76540544 76540586 -43743726 + (GAA)n Simple_repeat Simple_repeat 2 43 0 7 1168 576 77 0 0 chr13 76540584 76540662 -43743650 + (GGGA)n Simple_repeat Simple_repeat 4 81 0 7 1168 7502 164 16 1 chr13 76540662 76540833 -43743479 + Lx LINE L1 4451 4621 -1256 7 1168 189 74 0 0 chr13 76540833 76540860 -43743452 + (CAA)n Simple_repeat Simple_repeat 2 28 0 7 1168 7502 148 10 1 chr13 76540860 76542863 -43741449 + Lx LINE L1 4622 6652 -2 7 1168 26 64 0 0 chr13 76542872 76542919 -43741393 + AT_rich Low_complexity Low_complexity 1 47 0 7 1168 446 83 0 35 chr13 76543032 76543119 -43741193 + L1Md_F2 LINE L1 6497 6580 -2 7 1168 654 248 143 0 chr13 76543228 76543389 -43740923 + MTD LTR MaLR 116 299 -120 7 1168 1645 151 93 7 chr13 76543476 76543777 -43740535 - IAPEY3_LTR LTR ERVK -5 327 1 7 1168 228 149 0 0 chr13 76545254 76545301 -43739011 + (TA)n Simple_repeat Simple_repeat 1 47 0 8 1168 378 0 0 0 chr13 76545302 76545344 -43738968 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1169 321 244 0 0 chr13 76546241 76546327 -43737985 + Lx6 LINE L1 7168 7253 -207 8 1169 470 241 54 0 chr13 76547524 76547636 -43736676 - ID_B1 SINE B4 -1 223 106 8 1169 183 42 0 0 chr13 76547668 76547692 -43736620 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 8 1169 306 367 45 78 chr13 76547871 76548116 -43736196 + LTR16A1 LTR ERVL 6 242 -214 8 1169 1775 149 77 58 chr13 76548660 76549037 -43735275 - ORR1C2 LTR MaLR 0 384 1 8 1169 570 29 0 0 chr13 76549113 76549181 -43735131 + (TTTA)n Simple_repeat Simple_repeat 3 70 0 8 1169 249 33 0 0 chr13 76549363 76549393 -43734919 + (GA)n Simple_repeat Simple_repeat 1 30 0 8 1169 22 0 0 0 chr13 76549530 76549552 -43734760 + AT_rich Low_complexity Low_complexity 1 22 0 8 1169 24 0 0 0 chr13 76549565 76549589 -43734723 + AT_rich Low_complexity Low_complexity 1 24 0 9 1169 22 0 0 0 chr13 76549803 76549825 -43734487 + AT_rich Low_complexity Low_complexity 1 22 0 9 1169 195 42 0 0 chr13 76550021 76550045 -43734267 + (TG)n Simple_repeat Simple_repeat 1 24 0 9 1169 2511 236 57 34 chr13 76550045 76550848 -43733464 - L1_Mur3 LINE L1 -1054 4826 4005 9 1169 1280 180 113 10 chr13 76550857 76551149 -43733163 - RMER1B Other Other -11 1055 734 9 1169 256 242 48 0 chr13 76551147 76551209 -43733103 - RMER1A Other Other -951 79 15 9 1169 1268 205 98 10 chr13 76551193 76551498 -43732814 - RMER1B Other Other -689 377 46 9 1169 873 181 0 0 chr13 76551687 76551831 -43732481 + B1_Mur4 SINE Alu 2 145 -5 9 1169 198 0 0 0 chr13 76551838 76551860 -43732452 + (CAAAAA)n Simple_repeat Simple_repeat 6 27 0 9 1169 354 389 41 43 chr13 76551877 76552344 -43731968 - Charlie24 DNA MER1_type -1203 1247 782 9 1169 531 0 0 0 chr13 76552347 76552406 -43731906 + (GGAA)n Simple_repeat Simple_repeat 4 62 0 9 1169 333 0 0 0 chr13 76553061 76553098 -43731214 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1169 427 272 11 0 chr13 76553367 76553459 -43730853 - URR1B DNA MER1_type -132 93 1 1 1169 662 199 62 10 chr13 76553459 76553652 -43730660 - L1_Mur3 LINE L1 -3666 2214 2012 9 1169 1728 244 51 48 chr13 76553649 76554662 -43729650 - L1_Mur3 LINE L1 -3999 1881 856 9 1169 457 184 0 0 chr13 76554992 76555068 -43729244 - MTC LTR MaLR -345 76 1 1 1169 2748 183 41 43 chr13 76556516 76557024 -43727288 + RLTR18B LTR ERVK 1 507 -5 1 1169 24 0 0 0 chr13 76557172 76557196 -43727116 + AT_rich Low_complexity Low_complexity 1 24 0 1 1169 1513 193 21 21 chr13 76557199 76557538 -43726774 - RMER1C Other Other -4 1338 1000 1 1169 229 130 0 0 chr13 76557565 76557611 -43726701 - L1_Mus1 LINE L1 0 6567 6522 1 1169 1106 219 72 90 chr13 76557611 76557988 -43726324 - L1VL1 LINE L1 -5997 425 56 1 1169 1663 179 6 12 chr13 76558655 76558988 -43725324 - Lx9 LINE L1 -579 7065 6735 1 1169 1310 186 61 19 chr13 76558985 76559362 -43724950 + Lx9 LINE L1 7251 7643 -1 1 1169 13099 94 26 3 chr13 76559534 76562149 -43722163 + L1VL2 LINE L1 305 2988 -627 1 1169 21 57 0 0 chr13 76562703 76562738 -43721574 + AT_rich Low_complexity Low_complexity 1 35 0 1 1169 598 276 85 5 chr13 76562878 76563078 -43721234 + MIR SINE MIR 36 251 -11 1 1169 695 188 16 0 chr13 76563440 76563568 -43720744 + B3 SINE B2 1 130 -86 1 1169 601 264 93 44 chr13 76565443 76565476 -43718836 - B3A SINE B2 -6 192 153 1 1169 863 73 8 0 chr13 76565476 76565600 -43718712 + (GA)n Simple_repeat Simple_repeat 2 126 0 1 1169 601 264 93 44 chr13 76565600 76565748 -43718564 - B3A SINE B2 -46 152 3 1 1169 21 0 0 0 chr13 76565967 76565988 -43718324 + AT_rich Low_complexity Low_complexity 1 21 0 1 1169 202 123 43 58 chr13 76566178 76566247 -43718065 + (TATATG)n Simple_repeat Simple_repeat 5 72 0 1 1169 364 305 98 51 chr13 76566264 76566499 -43717813 + L1ME1 LINE L1 5908 6153 -26 1 1169 711 0 0 0 chr13 76567623 76567702 -43716610 + (GA)n Simple_repeat Simple_repeat 1 79 0 1 1169 227 254 63 0 chr13 76568088 76568151 -43716161 - ID2 SINE ID -12 71 5 1 1169 1253 242 47 104 chr13 76568822 76569224 -43715088 - MTE2a LTR MaLR 0 379 1 1 1169 701 186 115 11 chr13 76569510 76569684 -43714628 + B2_Mm2 SINE B2 2 193 -2 1 1169 188 282 45 34 chr13 76570283 76570371 -43713941 - L2 LINE L2 -619 2800 2712 1 1169 1129 200 14 14 chr13 76571239 76571462 -43712850 - RMER15 LTR ERVL -58 517 295 1 1169 2051 137 104 10 chr13 76572021 76572406 -43711906 + MTC LTR MaLR 1 421 0 1 1169 693 179 256 0 chr13 76574391 76574625 -43709687 + Lx9 LINE L1 7340 7633 -11 1 1169 477 124 31 0 chr13 76574627 76574724 -43709588 + GA-rich Low_complexity Low_complexity 3 102 0 1 1169 1258 265 99 8 chr13 76574767 76574993 -43709319 + RCHARR1 DNA MER1_type 1 244 -730 1 1169 546 16 0 0 chr13 76574993 76575056 -43709256 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 1169 1258 265 99 8 chr13 76575056 76575194 -43709118 + RCHARR1 DNA MER1_type 245 397 -577 1 1169 1165 68 0 0 chr13 76575237 76575383 -43708929 - B1_Mus2 SINE Alu 0 147 2 1 1169 1412 238 26 20 chr13 76575383 76575730 -43708582 + RCHARR1 DNA MER1_type 626 974 0 1 1169 640 195 106 0 chr13 76575802 76575925 -43708387 + B1_Mus1 SINE Alu 1 136 -12 1 1169 1414 263 188 39 chr13 76575981 76576615 -43707697 - Lx9 LINE L1 -13 7631 6904 1 1169 232 139 70 0 chr13 76576615 76576658 -43707654 + MTD LTR MaLR 365 410 -9 1 1169 303 279 105 19 chr13 76576703 76576824 -43707488 - MTC LTR MaLR -68 353 199 1 1169 1112 237 18 18 chr13 76577123 76577398 -43706914 - Lx9 LINE L1 -744 6900 6626 1 1169 261 0 0 0 chr13 76577556 76577585 -43706727 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1169 577 346 98 68 chr13 76578388 76578989 -43705323 - MLT1E2 LTR MaLR 0 627 6 1 1169 876 202 155 1 chr13 76579759 76579975 -43704337 + ORR1C2 LTR MaLR 54 318 -66 1 1169 274 325 123 32 chr13 76579976 76580195 -43704117 + MIR SINE MIR 17 255 -7 1 1169 24 0 0 0 chr13 76581096 76581120 -43703192 + AT_rich Low_complexity Low_complexity 1 24 0 1 1169 390 343 46 6 chr13 76581709 76581882 -43702430 - Lx8 LINE L1 -214 7259 7080 1 1169 348 115 68 54 chr13 76582678 76582825 -43701487 + (CAGG)n Simple_repeat Simple_repeat 2 150 0 1 1169 263 187 90 20 chr13 76582859 76583066 -43701246 + (CAGG)n Simple_repeat Simple_repeat 1 221 0 1 1169 3107 118 128 7 chr13 76583499 76584070 -43700242 - Lx2 LINE L1 0 6997 6358 1 1169 266 256 63 13 chr13 76585495 76585574 -43698738 + MIRc SINE MIR 42 124 -144 1 1169 1647 158 95 71 chr13 76585920 76586288 -43698024 - ORR1C2 LTR MaLR -7 377 1 1 1169 360 233 14 0 chr13 76586843 76586916 -43697396 - B1_Mur4 SINE Alu -52 98 25 1 1169 236 246 134 60 chr13 76587006 76587142 -43697170 - MLT2B1 LTR ERVL -185 229 87 1 1169 1316 74 0 0 chr13 76587262 76587437 -43696875 - L1Md_T LINE L1 -2 6580 6406 1 1169 1910 116 9 59 chr13 76587546 76587885 -43696427 - RLTRETN_Mm LTR ERVK 0 322 1 1 1169 29899 78 36 54 chr13 76587885 76592813 -43691499 - MMETn-int LTR ERVK 0 4844 2 1 1169 1778 135 9 62 chr13 76592814 76593154 -43691158 - RLTRETN_Mm LTR ERVK 0 322 1 1 1169 270 0 0 0 chr13 76593186 76593216 -43691096 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1169 885 200 130 0 chr13 76593409 76593609 -43690703 + URR1A DNA MER1_type 1 226 0 1 1169 692 218 60 0 chr13 76594279 76594412 -43689900 + RSINE1 SINE B4 2 142 -23 1 1169 603 62 0 0 chr13 76594426 76594506 -43689806 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 1169 527 315 24 12 chr13 76595304 76595468 -43688844 + B3A SINE B2 1 166 -32 1 1169 1348 104 70 22 chr13 76595665 76595892 -43688420 - Lx2 LINE L1 0 6997 6760 1 1169 789 269 102 9 chr13 76596238 76596463 -43687849 - B4A SINE B4 -8 284 39 1 1169 262 291 157 32 chr13 76596521 76596738 -43687574 - MER113 DNA MER1_type -72 449 206 1 1169 1091 261 191 13 chr13 76596865 76597342 -43686970 - Lx9 LINE L1 -22 7622 7061 1 1169 181 237 26 0 chr13 76598066 76598104 -43686208 + L3b LINE CR1 430 468 -14 1 1169 1300 194 5 0 chr13 76601854 76602071 -43682241 + URR1B DNA MER1_type 3 220 -5 1 1169 310 37 19 0 chr13 76603316 76603370 -43680942 - L1Md_F2 LINE L1 0 6582 6528 1 1169 3030 43 62 0 chr13 76604780 76605153 -43679159 - MTA_Mm LTR MaLR 0 396 1 1 1169 1565 256 35 86 chr13 76605925 76606353 -43677959 + MTD LTR MaLR 1 406 -13 1 1169 893 175 44 28 chr13 76606416 76606598 -43677714 - RLTR20B3 LTR ERVK -345 232 48 1 1169 404 279 25 12 chr13 76606611 76606774 -43677538 - L1Md_F LINE L1 -5783 736 572 1 1169 983 275 47 78 chr13 76606784 76607510 -43676802 - L1VL1 LINE L1 -5901 521 4 1 1169 371 269 7 71 chr13 76607516 76607656 -43676656 - Lx9 LINE L1 -539 7105 6975 1 1169 1086 220 136 8 chr13 76607681 76607920 -43676392 - MTD LTR MaLR -8 411 140 1 1169 2247 229 40 30 chr13 76607920 76608492 -43675820 - RLTR20A2 LTR ERVK 0 578 1 1 1169 672 147 100 8 chr13 76608493 76608623 -43675689 - MTD LTR MaLR -277 142 1 1 1169 616 282 206 22 chr13 76608764 76609520 -43674792 - L1M4 LINE L1 -1195 4951 4058 1 1169 22 0 0 0 chr13 76609653 76609675 -43674637 + AT_rich Low_complexity Low_complexity 1 22 0 1 1169 32116 66 1 14 chr13 76609688 76615843 -43668469 - L1Md_F2 LINE L1 -1 6581 507 1 1169 21 36 0 0 chr13 76616258 76616286 -43668026 + AT_rich Low_complexity Low_complexity 1 28 0 1 1169 513 339 69 17 chr13 76616443 76616731 -43667581 - MLT1C LTR MaLR -2 465 163 1 1169 21 0 0 0 chr13 76617415 76617436 -43666876 + AT_rich Low_complexity Low_complexity 1 21 0 1 1169 313 239 34 11 chr13 76617461 76617550 -43666762 - MER5A1 DNA MER1_type 0 166 76 1 1169 571 273 19 0 chr13 76618159 76618364 -43665948 - L1M2 LINE L1 -517 5774 5566 1 1169 659 182 28 24 chr13 76618364 76618512 -43665800 - ORR1D1-int LTR MaLR -1627 336 197 1 1169 888 249 14 29 chr13 76618606 76618813 -43665499 - ORR1D1-int LTR MaLR -1166 204 1 1 1169 1078 171 21 4 chr13 76618813 76619075 -43665237 - ORR1D1 LTR MaLR 0 374 33 1 1169 239 337 19 38 chr13 76619568 76619673 -43664639 + MIRb SINE MIR 44 146 -122 1 1169 25 65 0 0 chr13 76620732 76620778 -43663534 + AT_rich Low_complexity Low_complexity 1 46 0 1 1169 1293 264 156 35 chr13 76620778 76620875 -43663437 - Lx9 LINE L1 -20 7624 7462 1 1169 432 0 0 0 chr13 76620875 76620923 -43663389 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1169 1293 264 156 35 chr13 76620923 76621416 -43662896 - Lx9 LINE L1 -183 7461 6964 1 1169 291 54 0 0 chr13 76621416 76621453 -43662859 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1169 1293 264 156 35 chr13 76621453 76621509 -43662803 - Lx9 LINE L1 -681 6963 6901 1 1169 306 200 0 0 chr13 76622082 76622152 -43662160 + L1_Mus2 LINE L1 6494 6563 -3 1 1169 188 88 59 0 chr13 76622565 76622599 -43661713 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 1 1169 493 222 75 53 chr13 76622605 76622738 -43661574 - B1_Mus2 SINE Alu 0 147 12 1 1169 27 0 0 0 chr13 76622966 76622993 -43661319 + AT_rich Low_complexity Low_complexity 1 27 0 1 1169 647 179 101 17 chr13 76623019 76623138 -43661174 - B3 SINE B2 -86 130 2 1 1169 4379 146 145 101 chr13 76623789 76624890 -43659422 - ORR1A4-int LTR MaLR -813 1150 1 1 1169 1438 155 156 17 chr13 76624890 76625179 -43659133 - ORR1A4 LTR MaLR 0 329 1 1 1169 1689 227 43 2 chr13 76625179 76625577 -43658735 - Lx9 LINE L1 -687 6957 6544 1 1169 1494 240 139 34 chr13 76625606 76626072 -43658240 - RLTR17 LTR ERVK -73 619 105 1 1169 890 203 77 26 chr13 76626078 76626311 -43658001 - Lx9 LINE L1 -1088 6556 6312 1 1169 797 233 19 14 chr13 76626317 76626530 -43657782 + Lx9 LINE L1 5766 5979 -1665 1 1169 615 157 0 0 chr13 76627330 76627438 -43656874 + T-rich Low_complexity Low_complexity 5 112 0 1 1169 620 141 25 0 chr13 76627439 76627560 -43656752 - Lx3_Mus LINE L1 0 7009 6886 1 1169 15614 82 108 17 chr13 76627560 76629988 -43654324 - Lx3_Mus LINE L1 -352 6657 4199 1 1169 639 0 0 0 chr13 76629988 76630059 -43654253 + (CATAT)n Simple_repeat Simple_repeat 3 73 0 1 1169 15614 85 192 12 chr13 76630059 76630291 -43654021 - Lx3_Mus LINE L1 -1688 4198 3532 1 1169 1265 111 5 5 chr13 76630291 76630482 -43653830 + B2_Mm1a SINE B2 1 191 -2 1 1169 15614 85 192 12 chr13 76630482 76631359 -43652953 - Lx3_Mus LINE L1 -2355 3531 2649 1 1169 10476 74 31 2 chr13 76631354 76633357 -43650955 - L1Md_A LINE L1 -13 6569 4477 1 1169 2362 128 47 16 chr13 76633361 76633813 -43650499 - IAPLTR2_Mm LTR ERVK -9 466 1 1 1169 5838 40 4 7 chr13 76633813 76634561 -43649751 - IAPEz-int LTR ERVK 0 6481 5736 1 1169 2068 72 0 4 chr13 76634560 76634839 -43649473 - IAPEz-int LTR ERVK -4845 1636 1359 1 1169 3327 64 1 17 chr13 76634839 76635418 -43648894 - IAPEz-int LTR ERVK -5819 662 168 1 1169 248 244 0 0 chr13 76635418 76635463 -43648849 - RLTR27 LTR ERVK -34 275 231 1 1169 226 321 0 0 chr13 76635499 76635552 -43648760 - RLTR27 LTR ERVK -34 275 223 1 1169 845 115 24 146 chr13 76635552 76635765 -43648547 - IAPEz-int LTR ERVK -6286 195 9 1 1169 2413 106 61 96 chr13 76635766 76636258 -43648054 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1169 1420 50 20 0 chr13 76636258 76636457 -43647855 - L1_Mm LINE L1 -1406 4477 4275 2 1169 589 105 0 0 chr13 76636561 76636647 -43647665 - IAPEz-int LTR ERVK -5037 1444 1359 2 1169 3300 67 1 16 chr13 76636647 76637225 -43647087 - IAPEz-int LTR ERVK -5819 662 168 2 1169 248 244 0 0 chr13 76637225 76637270 -43647042 - RLTR27 LTR ERVK -34 275 231 2 1169 226 321 0 0 chr13 76637306 76637359 -43646953 - RLTR27 LTR ERVK -34 275 223 2 1169 845 115 24 146 chr13 76637359 76637572 -43646740 - IAPEz-int LTR ERVK -6286 195 9 2 1169 2422 103 61 96 chr13 76637573 76638065 -43646247 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1169 5808 40 4 8 chr13 76638065 76638814 -43645498 - IAPEz-int LTR ERVK 0 6481 5736 2 1169 2098 72 0 0 chr13 76638813 76639091 -43645221 - IAPEz-int LTR ERVK -4845 1636 1359 2 1169 3357 64 1 16 chr13 76639091 76639669 -43644643 - IAPEz-int LTR ERVK -5819 662 168 2 1169 248 244 0 0 chr13 76639669 76639714 -43644598 - RLTR27 LTR ERVK -34 275 231 2 1169 231 312 47 0 chr13 76639751 76639815 -43644497 - RLTR27 LTR ERVK -34 275 209 2 1169 767 122 25 153 chr13 76639815 76640018 -43644294 - IAPEz-int LTR ERVK -6296 185 9 2 1169 2413 106 61 96 chr13 76640019 76640511 -43643801 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1169 21480 80 35 11 chr13 76640511 76644454 -43639858 - L1Md_A LINE L1 -1406 4477 441 2 1169 9397 114 43 27 chr13 76644467 76646691 -43637621 - L1_Mur1 LINE L1 -3225 2661 76 2 1169 311 0 26 0 chr13 76646826 76646865 -43637447 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 2 1169 1183 62 7 0 chr13 76646867 76647013 -43637299 - B1_Mus1 SINE Alu 0 148 2 2 1169 364 290 117 54 chr13 76647023 76647340 -43636972 - HAL1 LINE L1 -1315 1192 856 2 1169 213 184 20 20 chr13 76647859 76647909 -43636403 + CT-rich Low_complexity Low_complexity 2 51 0 2 1169 196 113 0 54 chr13 76648170 76648226 -43636086 + T-rich Low_complexity Low_complexity 2 54 0 2 1169 1983 176 41 28 chr13 76649298 76649689 -43634623 - RMER10B LTR ERVL 0 398 3 2 1169 507 33 0 0 chr13 76650268 76650329 -43633983 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1169 1465 236 58 30 chr13 76650333 76650730 -43633582 - RMER10A LTR ERVL -34 408 1 2 1169 261 346 199 12 chr13 76650887 76651048 -43633264 + MLT1J2 LTR MaLR 201 391 -57 2 1169 753 231 132 18 chr13 76651242 76651462 -43632850 - ORR1D1 LTR MaLR 0 374 130 2 1169 639 311 51 15 chr13 76651534 76651730 -43632582 - B3 SINE B2 -13 203 1 2 1169 966 228 35 3 chr13 76651786 76652057 -43632255 - L1_Rod LINE L1 -819 5324 4983 2 1169 526 272 58 53 chr13 76652057 76652247 -43632065 - B4 SINE B4 -69 223 33 2 1169 333 239 5 74 chr13 76652419 76652609 -43631703 + (CATAT)n Simple_repeat Simple_repeat 3 179 0 2 1169 21 0 0 0 chr13 76652836 76652857 -43631455 + AT_rich Low_complexity Low_complexity 1 21 0 2 1169 180 152 0 0 chr13 76653087 76653120 -43631192 + A-rich Low_complexity Low_complexity 1 33 0 2 1169 483 252 10 0 chr13 76655705 76655804 -43628508 + MIR SINE MIR 19 118 -144 2 1169 1273 48 12 12 chr13 76656336 76656505 -43627807 + MTB_Mm LTR MaLR 239 407 0 2 1169 1265 113 0 0 chr13 76656505 76656690 -43627622 - Lx2B LINE L1 -427 6573 6389 2 1169 11585 139 50 25 chr13 76656696 76658197 -43626115 - L1VL4 LINE L1 -281 3278 1718 2 1169 2676 67 9 0 chr13 76658197 76658540 -43625772 - ORR1A0 LTR MaLR 0 346 1 2 1169 11585 144 38 19 chr13 76658540 76659756 -43624556 - L1VL4 LINE L1 -1842 1717 499 2 1169 236 239 45 0 chr13 76659741 76659808 -43624504 - L1VL2 LINE L1 -5927 408 339 2 1169 1188 83 6 29 chr13 76660238 76660395 -43623917 + B2_Mm1t SINE B2 1 158 -35 2 1169 273 57 0 0 chr13 76660395 76660430 -43623882 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 2 1169 553 12 38 0 chr13 76660430 76660510 -43623802 + L1Md_F2 LINE L1 6499 6581 -1 2 1169 1188 83 6 29 chr13 76660510 76660524 -43623788 + B2_Mm1t SINE B2 159 168 -25 2 1169 351 0 0 0 chr13 76660872 76660911 -43623401 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2 1169 363 324 9 0 chr13 76661027 76661132 -43623180 + PB1D7 SINE Alu 3 108 -12 2 1169 245 27 0 51 chr13 76661183 76661222 -43623090 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2 1169 722 321 37 20 chr13 76661231 76661476 -43622836 - B4A SINE B4 0 292 44 2 1169 718 300 97 41 chr13 76661688 76662050 -43622262 - MER44C DNA MER2_type -1 732 351 2 1169 615 311 140 11 chr13 76662443 76662774 -43621538 - MLT1E1A LTR MaLR -6 674 305 2 1169 255 261 202 0 chr13 76662825 76662944 -43621368 - MLT1E1A LTR MaLR -510 144 2 2 1169 366 336 28 28 chr13 76663637 76663744 -43620568 + PB1D7 SINE Alu 14 120 0 2 1169 3826 142 52 22 chr13 76663850 76664563 -43619749 - RMER16-int LTR ERVK -2003 3403 2670 2 1169 1381 249 119 53 chr13 76664563 76665024 -43619288 + RMER16 LTR ERVK 1 533 0 2 1169 2021 146 10 39 chr13 76665026 76665411 -43618901 - RMER16-int LTR ERVK -2733 2673 2300 2 1169 2182 134 54 89 chr13 76665418 76665934 -43618378 - RLTR1B LTR ERV1 0 512 1 2 1169 3449 180 74 42 chr13 76665937 76667167 -43617145 - RMER16-int LTR ERVK -3773 3471 1486 2 1169 272 239 159 69 chr13 76667167 76667340 -43616972 - RLTR41 LTR ERV1 -259 187 1 2 1169 914 204 1 49 chr13 76667352 76667565 -43616747 - RMER16-int LTR ERVK -3901 1505 1328 2 1169 6163 99 83 15 chr13 76667608 76668850 -43615462 - RMER16-int LTR ERVK -3992 1414 89 2 1169 201 316 30 59 chr13 76669321 76669422 -43614890 + L3 LINE CR1 3992 4089 -400 2 1169 4199 212 83 11 chr13 76669530 76670446 -43613866 - RMER1A Other Other -48 982 1 2 1169 1812 276 54 14 chr13 76670464 76670961 -43613351 - RMER1B Other Other -539 527 11 2 1169 13673 84 2 7 chr13 76671978 76674643 -43609669 - L1_Mus1 LINE L1 -1 6566 3908 2 1169 22 0 0 0 chr13 76675841 76675863 -43608449 + AT_rich Low_complexity Low_complexity 1 22 0 2 1169 478 317 78 64 chr13 76675885 76676242 -43608070 + ORR1D2 LTR MaLR 1 362 -8 2 1169 4382 43 0 4 chr13 76676374 76676914 -43607398 + L1Md_F3 LINE L1 6033 6570 -14 2 1169 21 0 0 0 chr13 76676930 76676951 -43607361 + AT_rich Low_complexity Low_complexity 1 21 0 2 1169 307 103 86 0 chr13 76676952 76677010 -43607302 - Lx9 LINE L1 -5 7639 7577 2 1170 246 238 26 129 chr13 76680168 76680284 -43604028 + MLT1H1 LTR MaLR 366 514 -41 2 1170 1798 171 13 129 chr13 76680322 76680772 -43603540 - RMER10B LTR ERVL 0 398 1 2 1170 184 273 60 15 chr13 76681059 76681126 -43603186 - L4 LINE RTE -175 1854 1785 2 1170 934 180 6 28 chr13 76681214 76681391 -43602921 - Lx LINE L1 -174 6480 6308 2 1170 360 279 45 0 chr13 76681409 76681520 -43602792 + RLTR40 LTR ERVK 655 770 -47 2 1170 6784 45 1 1 chr13 76681945 76682774 -43601538 - L1Md_F2 LINE L1 -1 6581 5753 2 1170 470 282 191 30 chr13 76684107 76684275 -43600037 - ID_B1 SINE B4 -29 195 1 2 1170 260 219 98 0 chr13 76684513 76684595 -43599717 + Kanga1d DNA Tc2 4 93 -516 2 1170 2340 171 15 2 chr13 76685467 76685865 -43598447 + MTC LTR MaLR 1 403 -18 2 1170 339 25 0 0 chr13 76685880 76685920 -43598392 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1170 2256 171 13 3 chr13 76688657 76689036 -43595276 + MTC LTR MaLR 6 388 -33 2 1170 1303 179 146 62 chr13 76689036 76689441 -43594871 - RLTR41 LTR ERV1 0 446 8 2 1170 253 122 49 0 chr13 76689448 76689489 -43594823 + MTC LTR MaLR 379 421 0 2 1170 489 278 19 0 chr13 76690452 76690560 -43593752 - B1_Mur1 SINE Alu -38 111 2 2 1170 750 223 0 0 chr13 76690843 76691068 -43593244 + CT-rich Low_complexity Low_complexity 1 225 0 2 1170 793 188 0 0 chr13 76691073 76691206 -43593106 - B1_Mur4 SINE Alu 0 150 18 2 1170 229 245 103 122 chr13 76691119 76691210 -43593102 - MT2B LTR ERVL -345 256 168 2 1170 216 97 0 0 chr13 76691210 76691241 -43593071 + (CCA)n Simple_repeat Simple_repeat 3 33 0 2 1170 229 245 103 122 chr13 76691241 76691256 -43593056 - MT2B LTR ERVL -434 167 152 2 1170 226 238 11 130 chr13 76691828 76691920 -43592392 + L2c LINE L2 3299 3379 -8 2 1170 584 236 0 8 chr13 76693022 76693150 -43591162 - ID_B1 SINE B4 -3 221 95 2 1170 27 29 0 0 chr13 76693153 76693187 -43591125 + AT_rich Low_complexity Low_complexity 1 34 0 2 1170 27 0 0 0 chr13 76693429 76693456 -43590856 + AT_rich Low_complexity Low_complexity 1 27 0 2 1170 213 333 0 93 chr13 76693922 76694008 -43590304 + MIR SINE MIR 2 79 -183 2 1170 504 0 0 0 chr13 76694093 76694149 -43590163 + (TTTTG)n Simple_repeat Simple_repeat 3 58 0 2 1170 1095 52 7 0 chr13 76694149 76694285 -43590027 - B1_Mus1 SINE Alu -11 137 1 2 1170 225 0 0 0 chr13 76694285 76694310 -43590002 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1170 464 308 25 19 chr13 76696209 76696371 -43587941 - MTD LTR MaLR -12 407 245 2 1170 1163 182 50 8 chr13 76696667 76696905 -43587407 - MTD LTR MaLR -171 248 1 2 1170 433 321 172 64 chr13 76697303 76697739 -43586573 - MLT1H LTR MaLR -2 547 22 2 1170 327 301 8 58 chr13 76698138 76698258 -43586054 + MLT1A1 LTR MaLR 1 114 -294 2 1170 264 289 22 11 chr13 76698506 76698597 -43585715 + MTE2a LTR MaLR 275 366 -13 2 1170 285 246 0 40 chr13 76698905 76698981 -43585331 + MTE2a LTR MaLR 115 187 -232 2 1170 555 289 71 71 chr13 76698981 76699261 -43585051 + Lx8 LINE L1 7192 7471 -2 2 1170 24 0 0 0 chr13 76699261 76699285 -43585027 + AT_rich Low_complexity Low_complexity 1 24 0 2 1170 653 284 55 21 chr13 76699289 76699508 -43584804 + MTE2a LTR MaLR 170 376 -3 2 1170 593 234 58 132 chr13 76699553 76699848 -43584464 + MTE-int LTR MaLR 70 339 -919 2 1170 437 271 215 15 chr13 76699849 76700044 -43584268 + MTE-int LTR MaLR 744 977 -603 2 1170 1376 264 48 26 chr13 76700193 76700609 -43583703 - BGLII_B LTR ERVK -1 440 16 2 1170 407 235 12 0 chr13 76700656 76700741 -43583571 + Lx9 LINE L1 7070 7155 -489 2 1170 182 119 48 0 chr13 76702389 76702431 -43581881 + T-rich Low_complexity Low_complexity 3 46 0 2 1170 409 13 64 39 chr13 76702901 76702979 -43581333 + (TTTTG)n Simple_repeat Simple_repeat 1 80 0 2 1170 1070 116 0 0 chr13 76702979 76703126 -43581186 - B1_Mus2 SINE Alu 0 147 1 2 1170 23 0 0 0 chr13 76703128 76703151 -43581161 + AT_rich Low_complexity Low_complexity 1 23 0 2 1170 711 337 104 28 chr13 76703437 76703801 -43580511 - MLT1G3 LTR MaLR -177 402 1 2 1170 409 302 255 70 chr13 76704308 76704966 -43579346 - MLT1G3-int LTR MaLR -695 794 15 2 1170 26 50 0 0 chr13 76706476 76706516 -43577796 + AT_rich Low_complexity Low_complexity 1 40 0 2 1170 1818 275 31 17 chr13 76706544 76707022 -43577290 - Lx5 LINE L1 -57 6993 6523 2 1170 315 220 53 32 chr13 76707273 76707367 -43576945 + MTC LTR MaLR 263 407 -14 2 1170 366 47 30 30 chr13 76707475 76707541 -43576771 + (TTTTTG)n Simple_repeat Simple_repeat 2 67 0 2 1170 280 325 43 70 chr13 76708205 76708371 -43575941 + MIR SINE MIR 23 181 -81 2 1170 1589 103 48 30 chr13 76708947 76709218 -43575094 - Lx LINE L1 -12 6642 6367 2 1170 1189 79 11 6 chr13 76709559 76709738 -43574574 + L1_Mus3 LINE L1 6454 6633 -5 3 1170 352 311 75 104 chr13 76709997 76710198 -43574114 + MER102a DNA MER1_type 127 321 -9 3 1170 276 294 90 18 chr13 76710231 76710342 -43573970 - MamRep605 Unknown Unknown -741 135 17 3 1170 391 298 39 46 chr13 76710813 76710943 -43573369 + B3A SINE B2 2 130 -68 3 1170 540 0 0 0 chr13 76710954 76711014 -43573298 + (CA)n Simple_repeat Simple_repeat 1 60 0 3 1170 239 0 0 31 chr13 76711324 76711356 -43572956 + (TTTTTG)n Simple_repeat Simple_repeat 4 34 0 3 1170 1060 83 7 0 chr13 76711356 76711501 -43572811 - B1_Mus1 SINE Alu 0 148 3 3 1170 14548 138 81 5 chr13 76711520 76715075 -43569237 - L1_Mur2 LINE L1 -411 5466 1203 3 1170 1972 199 26 83 chr13 76715043 76715111 -43569201 - L1Md_F LINE L1 -5382 1140 1090 3 1170 315 0 0 0 chr13 76715111 76715146 -43569166 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1170 2490 182 31 5 chr13 76715146 76715646 -43568666 - L1Md_F LINE L1 -5411 1208 604 3 1170 2265 109 3 0 chr13 76715642 76715999 -43568313 + MusHAL1 LINE L1 1849 2206 -506 3 1170 290 80 0 20 chr13 76716020 76716071 -43568241 + (CAAA)n Simple_repeat Simple_repeat 3 52 0 3 1170 222 128 0 0 chr13 76716857 76716896 -43567416 + (TGG)n Simple_repeat Simple_repeat 3 41 0 3 1170 3402 179 111 24 chr13 76717223 76717969 -43566343 + RLTR40 LTR ERVK 1 811 -6 3 1170 1002 202 89 38 chr13 76718149 76718386 -43565926 + RLTR40 LTR ERVK 569 817 0 3 1170 309 187 0 0 chr13 76718409 76718484 -43565828 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 1170 251 311 0 0 chr13 76721508 76721569 -43562743 - PB1D10 SINE Alu -24 93 33 3 1170 212 189 0 0 chr13 76721588 76721625 -43562687 + (TAA)n Simple_repeat Simple_repeat 2 38 0 3 1170 4863 40 19 0 chr13 76721678 76722273 -43562039 - L1Md_F3 LINE L1 -12 6572 5967 3 1170 276 130 0 0 chr13 76722595 76722641 -43561671 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 3 1170 820 133 8 0 chr13 76723238 76723366 -43560946 - Lx4A LINE L1 -115 6943 6815 3 1170 22 0 0 0 chr13 76723372 76723394 -43560918 + AT_rich Low_complexity Low_complexity 1 22 0 3 1170 251 363 91 52 chr13 76723782 76723936 -43560376 - MIR SINE MIR -72 190 31 3 1170 993 304 49 24 chr13 76724969 76725509 -43558803 - L1_Rod LINE L1 -107 5773 5222 3 1170 1496 38 0 0 chr13 76725680 76725864 -43558448 + L1Md_F2 LINE L1 5403 5586 -297 3 1170 7953 50 7 2 chr13 76725864 76726855 -43557457 + L1Md_F2 LINE L1 5587 6582 0 3 1170 493 303 28 7 chr13 76727274 76727417 -43556895 + ID_B1 SINE B4 79 224 0 3 1170 183 420 24 24 chr13 76727586 76727752 -43556560 - MIR3 SINE MIR -3 205 40 3 1170 629 203 144 36 chr13 76728008 76728202 -43556110 - B3 SINE B2 0 216 2 3 1170 1026 0 0 0 chr13 76729420 76729534 -43554778 + (GAA)n Simple_repeat Simple_repeat 1 114 0 3 1170 981 182 0 3 chr13 76730064 76730400 -43553912 + (CA)n Simple_repeat Simple_repeat 1 334 0 3 1170 419 219 31 20 chr13 76730849 76730947 -43553365 - RLTR23 LTR ERV1 0 430 332 3 1170 183 298 53 0 chr13 76731493 76731550 -43552762 + MIRb SINE MIR 175 234 -34 3 1170 426 264 34 54 chr13 76732064 76732212 -43552100 - B1F SINE Alu 0 149 5 3 1170 220 303 0 29 chr13 76732236 76732304 -43552008 + MIR3 SINE MIR 129 194 -14 3 1170 264 120 0 0 chr13 76732682 76732732 -43551580 + (TTAA)n Simple_repeat Simple_repeat 3 52 0 3 1170 1131 64 0 0 chr13 76732734 76732874 -43551438 - B1_Mm SINE Alu -6 141 2 3 1170 343 169 0 0 chr13 76732979 76733038 -43551274 - MTEa LTR MaLR -8 371 313 3 1170 1032 241 66 5 chr13 76733042 76733447 -43550865 - MTC LTR MaLR 0 421 1 3 1170 320 269 22 39 chr13 76734236 76734474 -43549838 + (TG)n Simple_repeat Simple_repeat 1 234 0 3 1170 533 342 67 60 chr13 76734569 76734852 -43549460 - B4A SINE B4 -4 288 4 3 1170 185 213 0 32 chr13 76734952 76735015 -43549297 + (TATATG)n Simple_repeat Simple_repeat 2 62 0 3 1170 302 228 73 8 chr13 76735129 76735253 -43549059 - Lx7 LINE L1 0 7696 7565 3 1170 609 309 55 14 chr13 76735253 76735473 -43548839 - B4A SINE B4 -63 229 1 3 1170 437 320 103 32 chr13 76735479 76735760 -43548552 + Charlie20a DNA Charlie 443 743 -64 3 1170 219 114 0 0 chr13 76735853 76735888 -43548424 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1170 654 158 158 0 chr13 76736137 76736264 -43548048 - B1_Mus2 SINE Alu 0 147 1 3 1170 486 288 12 25 chr13 76736545 76736705 -43547607 + RSINE1 SINE B4 2 159 -6 3 1170 22 0 0 0 chr13 76738130 76738152 -43546160 + AT_rich Low_complexity Low_complexity 1 22 0 3 1170 205 347 64 8 chr13 76739367 76739492 -43544820 - MIRc SINE MIR -45 223 92 3 1170 242 122 0 20 chr13 76739612 76739662 -43544650 - Lx8 LINE L1 0 7473 7425 3 1170 899 246 94 118 chr13 76739830 76740204 -43544108 + MTE2a LTR MaLR 14 378 -1 3 1170 1429 257 149 63 chr13 76740426 76740690 -43543622 - RMER1B Other Other -6 1060 735 3 1170 2989 78 2 2 chr13 76740690 76741086 -43543226 + MTA_Mm LTR MaLR 1 396 0 3 1170 7339 77 23 73 chr13 76741086 76742239 -43542073 + MTA_Mm-int LTR MaLR 1 1096 -2 3 1170 3018 71 5 2 chr13 76742240 76742635 -43541677 + MTA_Mm LTR MaLR 1 396 0 3 1170 1429 257 149 63 chr13 76742635 76743297 -43541015 - RMER1B Other Other -332 734 53 3 1170 395 88 33 11 chr13 76743481 76743573 -43540739 + (TTTG)n Simple_repeat Simple_repeat 2 95 0 3 1170 225 108 0 0 chr13 76743967 76744004 -43540308 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1170 188 275 87 0 chr13 76745329 76745398 -43538914 + MIR SINE MIR 175 249 -13 3 1170 4823 85 4 8 chr13 76746833 76747596 -43536716 - Lx3_Mus LINE L1 -1049 5960 5205 3 1170 7178 85 36 2 chr13 76747596 76748589 -43535723 + Lx3_Mus LINE L1 5975 7001 -8 3 1170 226 119 49 33 chr13 76749836 76749897 -43534415 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 1170 606 318 129 39 chr13 76750753 76751087 -43533225 - MLT1C LTR MaLR -6 461 98 3 1170 209 109 22 0 chr13 76752026 76752072 -43532240 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 1170 2540 124 40 7 chr13 76753985 76754390 -43529922 + BGLII_B LTR ERVK 1 418 -23 3 1170 17757 83 40 11 chr13 76754397 76757793 -43526519 - L1VL4 LINE L1 0 3559 57 3 1170 417 117 25 25 chr13 76758911 76758990 -43525322 + Lx9 LINE L1 7380 7458 -186 3 1170 525 32 0 0 chr13 76758990 76759053 -43525259 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1170 600 129 16 0 chr13 76759062 76759186 -43525126 + Lx9 LINE L1 7512 7637 -7 3 1170 297 337 30 0 chr13 76759198 76759299 -43525013 - MIR SINE MIR -151 111 8 3 1170 409 354 117 29 chr13 76760112 76760566 -43523746 - L2 LINE L2 -556 2863 2370 3 1170 232 324 19 10 chr13 76761974 76762077 -43522235 - MLT1L LTR MaLR -3 607 504 3 1170 1690 139 4 0 chr13 76762079 76762337 -43521975 + ORR1A3 LTR MaLR 1 259 -67 3 1170 265 300 18 9 chr13 76762770 76762881 -43521431 - L1MC3 LINE L1 -20 7765 7654 3 1170 609 323 90 26 chr13 76762889 76763156 -43521156 + B4A SINE B4 3 286 -6 3 1170 258 242 30 0 chr13 76763377 76763443 -43520869 + MER53 DNA hAT 54 121 -72 3 1170 876 291 92 14 chr13 76763492 76763994 -43520318 - L1MC3 LINE L1 -305 7480 6940 3 1170 22 56 0 0 chr13 76764325 76764361 -43519951 + AT_rich Low_complexity Low_complexity 1 36 0 3 1170 377 241 48 104 chr13 76764361 76764484 -43519828 - B3A SINE B2 0 198 83 3 1170 4960 111 25 19 chr13 76764484 76765279 -43519033 + RLTR13D1 LTR ERVK 1 978 0 3 1170 189 0 0 0 chr13 76766483 76766504 -43517808 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1170 638 174 6 83 chr13 76766683 76766700 -43517612 + ID_B1 SINE B4 79 222 -1 3 1170 1079 65 0 0 chr13 76766700 76766839 -43517473 + B1_Mus1 SINE Alu 10 148 0 3 1170 7629 116 7 38 chr13 76767483 76768943 -43515369 - L1_Mus2 LINE L1 0 6566 5118 3 1170 3247 41 5 17 chr13 76768943 76769365 -43514947 - L1Md_F2 LINE L1 0 6582 6166 3 1170 7629 174 9 111 chr13 76769365 76770541 -43513771 - L1_Mus2 LINE L1 -769 5117 4129 3 1170 227 297 0 39 chr13 76771578 76771655 -43512657 + MLT1A1 LTR MaLR 313 386 -22 3 1170 1360 262 80 19 chr13 76772203 76772743 -43511569 - Lx9 LINE L1 -5 7639 7067 3 1170 24 53 0 0 chr13 76772907 76772945 -43511367 + AT_rich Low_complexity Low_complexity 1 38 0 3 1170 21 57 0 0 chr13 76774561 76774596 -43509716 + AT_rich Low_complexity Low_complexity 1 35 0 3 1170 10283 10 0 0 chr13 76775212 76777115 -43507197 - L1Md_A LINE L1 -1 6581 4679 3 1170 507 296 75 36 chr13 76777227 76777532 -43506780 + L1M4 LINE L1 4274 4590 -1556 3 1170 229 347 129 23 chr13 76777571 76777742 -43506570 - MIR SINE MIR -2 260 72 3 1170 232 280 108 18 chr13 76777980 76778147 -43506165 + Lx8 LINE L1 7264 7445 -28 3 1170 22 35 0 0 chr13 76778577 76778606 -43505706 + AT_rich Low_complexity Low_complexity 1 29 0 3 1170 189 0 0 0 chr13 76778616 76778637 -43505675 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 1170 1058 87 0 24 chr13 76778800 76778965 -43505347 + L1_Mus2 LINE L1 6403 6563 -3 3 1170 3948 66 0 0 chr13 76780014 76780502 -43503810 - L1_Mus2 LINE L1 -16 6550 6063 3 1170 277 93 18 18 chr13 76781874 76781929 -43502383 + (TA)n Simple_repeat Simple_repeat 2 56 0 3 1170 29 0 0 0 chr13 76782692 76782721 -43501591 + AT_rich Low_complexity Low_complexity 1 29 0 3 1170 21 36 0 0 chr13 76783029 76783057 -43501255 + AT_rich Low_complexity Low_complexity 1 28 0 3 1170 357 24 0 0 chr13 76783126 76783168 -43501144 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1170 375 23 0 0 chr13 76783168 76783211 -43501101 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1170 354 307 45 20 chr13 76783261 76783507 -43500805 + L1MC4a LINE L1 5877 6128 -1754 3 1170 511 323 100 36 chr13 76783629 76784356 -43499956 + L1MC4a LINE L1 6465 7229 -653 3 1170 491 165 9 0 chr13 76785022 76785131 -43499181 + (TG)n Simple_repeat Simple_repeat 1 110 0 3 1170 522 290 28 71 chr13 76785134 76785315 -43498997 - B3A SINE B2 -5 193 21 3 1170 1430 238 93 26 chr13 76785315 76785597 -43498715 - MTD LTR MaLR 0 419 111 3 1170 5677 128 42 17 chr13 76785597 76786532 -43497780 - RMER17B LTR ERVK 0 958 1 4 1170 1430 238 93 26 chr13 76786532 76786637 -43497675 - MTD LTR MaLR -309 110 6 3 1170 498 311 56 15 chr13 76786896 76787092 -43497220 - B3 SINE B2 -10 206 3 4 1170 1272 240 90 60 chr13 76787566 76788190 -43496122 - RMER13A LTR ERVK -109 751 50 4 1170 459 199 29 18 chr13 76788219 76788342 -43495970 - B1_Mus2 SINE Alu -19 131 1 4 1170 317 43 0 21 chr13 76788342 76788389 -43495923 - RMER4A LTR ERVK -420 46 1 4 1170 285 260 140 37 chr13 76788474 76788610 -43495702 + MER53 DNA hAT 1 150 -43 4 1170 180 0 0 0 chr13 76788793 76788813 -43495499 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 1170 2828 62 2 42 chr13 76788946 76789285 -43495027 - L1Md_F2 LINE L1 -1 6581 6258 4 1170 1979 84 153 0 chr13 76789285 76789593 -43494719 - IAPEY2_LTR LTR ERVK -2 355 1 4 1170 2828 62 2 42 chr13 76789593 76789656 -43494656 - L1Md_F2 LINE L1 -325 6257 6195 4 1170 695 348 82 41 chr13 76789737 76790178 -43494134 - MLT1C LTR MaLR 0 467 9 4 1170 1012 223 4 26 chr13 76790187 76790417 -43493895 + URR1A DNA MER1_type 1 225 -1 4 1170 6229 128 6 0 chr13 76790660 76792118 -43492194 - L1_Mus4 LINE L1 -434 6202 4735 4 1170 229 26 26 26 chr13 76792118 76792157 -43492155 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1170 5543 83 36 46 chr13 76792423 76793251 -43491061 - L1_Mus2 LINE L1 -1 6565 5746 4 1170 247 86 0 0 chr13 76793251 76793286 -43491026 - L1_Mus2 LINE L1 -330 5553 5519 4 1170 276 211 0 0 chr13 76794977 76795048 -43489264 + CT-rich Low_complexity Low_complexity 3 73 0 4 1170 907 170 7 0 chr13 76795061 76795202 -43489110 - B1_Mur4 SINE Alu -7 143 2 4 1170 200 77 77 0 chr13 76795738 76795790 -43488522 + T-rich Low_complexity Low_complexity 5 60 0 4 1170 1171 57 0 0 chr13 76795791 76795931 -43488381 - B1_Mus1 SINE Alu -6 142 3 4 1170 2848 12 0 3 chr13 76796201 76796543 -43487769 - L1_Mm LINE L1 -299 5584 5244 4 1170 5797 39 4 1 chr13 76796543 76797244 -43487068 + L1Md_T LINE L1 5880 6582 0 4 1170 24 0 0 0 chr13 76797855 76797879 -43486433 + AT_rich Low_complexity Low_complexity 1 24 0 4 1170 400 319 0 0 chr13 76798112 76798206 -43486106 + PB1D10 SINE Alu 13 106 -11 4 1170 185 154 0 25 chr13 76798214 76798254 -43486058 + A-rich Low_complexity Low_complexity 2 40 0 4 1170 206 82 47 47 chr13 76800223 76800287 -43484025 + (TTTG)n Simple_repeat Simple_repeat 1 64 0 4 1170 1064 103 7 0 chr13 76800287 76800433 -43483879 - B1_Mus1 SINE Alu 0 148 2 4 1170 7457 153 44 16 chr13 76800643 76802470 -43481842 - Lx2B LINE L1 -2 6998 5092 4 1170 20100 156 57 12 chr13 76802465 76808015 -43476297 - Lx LINE L1 0 6654 821 4 1171 24 53 0 0 chr13 76808286 76808324 -43475988 + AT_rich Low_complexity Low_complexity 1 38 0 4 1171 414 252 107 0 chr13 76809010 76809113 -43475199 - PB1D9 SINE Alu -6 114 1 4 1171 422 346 113 68 chr13 76809782 76810163 -43474149 - MLT1E3 LTR MaLR -2 622 225 4 1171 946 259 29 5 chr13 76810252 76810458 -43473854 - B3 SINE B2 0 216 6 4 1171 504 270 107 0 chr13 76811001 76811179 -43473133 - B3A SINE B2 -1 197 1 4 1171 195 288 5 0 chr13 76811448 76811509 -43472803 + L2a LINE L2 3029 3090 -285 4 1171 2620 187 56 8 chr13 76811545 76812079 -43472233 - Lx5 LINE L1 -3 7047 6488 4 1171 365 346 139 0 chr13 76812148 76812350 -43471962 + L2a LINE L2 3197 3426 0 4 1171 394 184 51 0 chr13 76812962 76813060 -43471252 - L1MA4 LINE L1 -3 6297 6195 4 1171 419 322 141 0 chr13 76813066 76813215 -43471097 + ORR1E LTR MaLR 3 172 -187 4 1171 509 324 47 4 chr13 76813466 76813723 -43470589 - L1MA4 LINE L1 -124 6176 5909 4 1171 4196 166 16 9 chr13 76813723 76814137 -43470175 - RMER6A LTR ERVK 0 756 341 4 1171 804 21 0 0 chr13 76814137 76814231 -43470081 + (TC)n Simple_repeat Simple_repeat 1 94 0 4 1171 4196 166 16 9 chr13 76814231 76814559 -43469753 - RMER6A LTR ERVK -416 340 10 4 1171 323 250 23 0 chr13 76814593 76814681 -43469631 - L1MA4 LINE L1 -562 5738 5649 4 1171 584 302 56 3 chr13 76814679 76814965 -43469347 + L1M2 LINE L1 5050 5350 -793 4 1171 276 153 27 40 chr13 76816104 76816179 -43468133 - L1MA6 LINE L1 -115 6185 6112 4 1171 7969 20 12 0 chr13 76816242 76817619 -43466693 - L1Md_T LINE L1 0 6582 5196 4 1171 277 241 35 0 chr13 76817619 76817677 -43466635 - ORR1D2 LTR MaLR -310 60 1 4 1171 460 252 134 0 chr13 76817678 76817880 -43466432 - Lx8 LINE L1 -300 7173 6945 4 1171 308 353 127 19 chr13 76818039 76818244 -43466068 - MLT1J-int LTR MaLR -416 971 745 4 1171 301 300 10 0 chr13 76818286 76818386 -43465926 - L1MB1 LINE L1 -1 6167 6067 4 1171 333 289 115 2 chr13 76818513 76818706 -43465606 - L1MB1 LINE L1 -336 5832 5616 4 1171 220 328 0 0 chr13 76818716 76818777 -43465535 + CT-rich Low_complexity Low_complexity 5 65 0 4 1171 365 286 203 42 chr13 76818782 76818994 -43465318 - L1M3 LINE L1 -588 5586 5341 4 1171 1833 222 30 71 chr13 76819014 76819639 -43464673 + RLTR1D LTR ERV1 52 609 -15 4 1171 583 293 88 9 chr13 76819671 76820002 -43464310 - L1M3 LINE L1 -830 5310 4954 4 1171 531 0 0 0 chr13 76820844 76820903 -43463409 + (TTA)n Simple_repeat Simple_repeat 3 61 0 4 1171 1085 123 6 0 chr13 76820909 76821088 -43463224 + (TTC)n Simple_repeat Simple_repeat 1 180 0 4 1171 420 243 9 80 chr13 76822292 76822404 -43461908 + ID_B1 SINE B4 80 183 -41 4 1171 322 266 117 18 chr13 76822312 76822423 -43461889 + B1_Mus1 SINE Alu 12 133 -15 4 1171 521 267 186 20 chr13 76822505 76822811 -43461501 + MLT1A0 LTR MaLR 1 357 -8 4 1171 23 0 0 0 chr13 76822991 76823014 -43461298 + AT_rich Low_complexity Low_complexity 1 23 0 4 1171 1050 83 0 33 chr13 76823089 76823239 -43461073 - B1_Mus2 SINE Alu 0 147 3 4 1171 909 239 25 0 chr13 76823742 76823943 -43460369 - B3 SINE B2 -9 207 2 4 1171 1149 264 60 33 chr13 76823954 76824440 -43459872 - L1MA6 LINE L1 -132 6168 5670 4 1171 12346 102 11 19 chr13 76824444 76826428 -43457884 - L1_Mm LINE L1 -500 5383 3416 4 1171 399 242 30 1 chr13 76826489 76826606 -43457706 - L1VL1 LINE L1 -6321 101 1 4 1171 466 245 84 47 chr13 76826642 76826875 -43457437 - L1M1 LINE L1 -490 5810 5564 4 1171 294 29 0 0 chr13 76826957 76826992 -43457320 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1171 364 294 32 87 chr13 76827030 76827516 -43456796 + L1M2 LINE L1 5106 5573 -727 4 1171 529 360 17 6 chr13 76828779 76828955 -43455357 + B4A SINE B4 29 206 -86 4 1171 497 226 7 0 chr13 76828974 76829120 -43455192 + (TA)n Simple_repeat Simple_repeat 1 147 0 4 1171 348 83 0 0 chr13 76829195 76829243 -43455069 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1171 197 83 28 0 chr13 76829282 76829318 -43454994 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 4 1171 1513 229 109 34 chr13 76829738 76830150 -43454162 - RMER19C LTR ERVK 0 611 169 4 1171 517 216 44 26 chr13 76830338 76830452 -43453860 + B1F2 SINE Alu 32 147 -2 4 1171 2240 98 57 19 chr13 76830633 76830999 -43453313 - Lx LINE L1 -1 6653 6274 4 1171 3963 169 43 10 chr13 76831302 76831414 -43452898 - RMER1A Other Other -4 1026 896 4 1171 189 0 0 0 chr13 76831414 76831435 -43452877 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1171 3963 178 39 14 chr13 76831435 76832103 -43452209 - RMER1A Other Other -135 895 277 4 1171 296 227 92 15 chr13 76832217 76832347 -43451965 + ORR1B1-int LTR MaLR 615 754 -755 4 1171 1059 47 0 0 chr13 76832248 76832377 -43451935 + B1_Mm SINE Alu 9 137 -10 4 1171 333 0 0 0 chr13 76832377 76832414 -43451898 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 4 1171 230 301 121 0 chr13 76832474 76832557 -43451755 - RMER1B Other Other -927 139 47 4 1171 1473 208 27 24 chr13 76832539 76832913 -43451399 - RMER1B Other Other -178 888 544 4 1171 714 363 7 28 chr13 76832902 76833270 -43451042 - RMER1C Other Other -504 838 406 4 1171 414 299 14 63 chr13 76833438 76833581 -43450731 - RMER1B Other Other -927 139 4 4 1171 24 0 0 0 chr13 76833598 76833622 -43450690 + AT_rich Low_complexity Low_complexity 1 24 0 4 1171 830 272 190 12 chr13 76834134 76834476 -43449836 + MTD LTR MaLR 17 419 0 4 1171 1342 182 27 61 chr13 76834549 76834842 -43449470 + Lx4B LINE L1 6762 7044 -14 4 1171 351 0 0 0 chr13 76834842 76834881 -43449431 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 4 1171 305 188 250 0 chr13 76835439 76835519 -43448793 + B3 SINE B2 35 134 -82 4 1171 652 233 143 22 chr13 76835519 76835581 -43448731 + Lx6 LINE L1 2766 2857 -3020 4 1171 221 0 35 0 chr13 76835581 76835610 -43448702 + (CAAA)n Simple_repeat Simple_repeat 4 33 0 4 1171 652 233 143 22 chr13 76835610 76835771 -43448541 + Lx6 LINE L1 2858 3016 -2861 4 1171 3619 162 63 21 chr13 76837490 76837918 -43446394 + Lx6 LINE L1 2994 3431 -2449 4 1171 1206 74 0 0 chr13 76837918 76838080 -43446232 + (GGAAA)n Simple_repeat Simple_repeat 3 164 0 4 1171 3619 162 63 21 chr13 76838080 76838424 -43445888 + Lx6 LINE L1 3432 3798 -2082 4 1171 1254 215 120 18 chr13 76838424 76838765 -43445547 - RLTR1 LTR ERV1 0 624 249 4 1171 577 219 98 0 chr13 76838971 76839135 -43445177 + Lx6 LINE L1 3796 3975 -1905 4 1171 28 0 0 0 chr13 76839142 76839170 -43445142 + AT_rich Low_complexity Low_complexity 1 28 0 4 1171 1432 183 40 32 chr13 76839205 76839563 -43444749 - RMER16 LTR ERVK 0 533 1 4 1171 2710 157 16 34 chr13 76839978 76840480 -43443832 - RLTR12B LTR ERVK -35 493 1 4 1171 8179 178 73 20 chr13 76841212 76841371 -43442941 + Lx6 LINE L1 4002 4160 -1720 4 1171 3315 83 111 42 chr13 76841371 76841901 -43442411 - RMER2 LTR ERV1 0 567 1 4 1171 8179 209 71 27 chr13 76841901 76844820 -43439492 + Lx6 LINE L1 4161 7460 0 4 1171 784 222 14 14 chr13 76844824 76845043 -43439269 + L1_Mur3 LINE L1 1427 1645 -4235 4 1171 23390 152 25 13 chr13 76845075 76851077 -43433235 + Lx LINE L1 583 6648 -6 4 1171 878 225 9 18 chr13 76851548 76851774 -43432538 - L1_Rod LINE L1 -975 4872 4649 4 1171 1290 89 5 22 chr13 76851791 76851975 -43432337 - B2_Mm2 SINE B2 -14 181 1 4 1171 1063 307 0 46 chr13 76852193 76852476 -43431836 + B4A SINE B4 13 282 -10 4 1171 282 264 195 0 chr13 76852806 76852893 -43431419 + RMER12 LTR ERVK 1 104 -1218 4 1171 348 178 0 0 chr13 76853012 76853085 -43431227 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1171 1348 179 103 14 chr13 76853540 76853690 -43430622 - RMER17C LTR ERVK -28 382 222 4 1171 851 19 0 9 chr13 76853690 76853796 -43430516 + (GA)n Simple_repeat Simple_repeat 2 106 0 4 1171 1348 179 103 14 chr13 76853796 76853996 -43430316 - RMER17C LTR ERVK -189 221 1 4 1171 365 237 0 13 chr13 76853996 76854065 -43430247 + RLTR22_Mur LTR ERVK 594 661 -1187 4 1171 37749 40 9 2 chr13 76854065 76860163 -43424149 - L1Md_T LINE L1 -3 6582 374 4 1171 1540 239 163 71 chr13 76860163 76861122 -43423190 + RLTR22_Mus LTR ERVK 653 1626 -182 5 1171 715 23 0 0 chr13 76861267 76861353 -43422959 + L1Md_T LINE L1 3399 3484 -2399 5 1171 4164 12 2 0 chr13 76861349 76861828 -43422484 + L1Md_T LINE L1 5107 5586 -297 5 1171 7997 56 0 0 chr13 76861828 76862824 -43421488 + L1Md_T LINE L1 5587 6582 0 5 1171 21 36 0 0 chr13 76864297 76864325 -43419987 + AT_rich Low_complexity Low_complexity 1 28 0 5 1171 650 13 13 0 chr13 76864602 76864681 -43419631 + (GA)n Simple_repeat Simple_repeat 1 80 0 5 1171 21 0 0 0 chr13 76866263 76866284 -43418028 + AT_rich Low_complexity Low_complexity 1 21 0 5 1171 734 271 126 7 chr13 76866305 76866713 -43417599 + L1MA6 LINE L1 5815 6295 -5 5 1171 425 289 58 0 chr13 76870202 76870323 -43413989 + B4 SINE B4 77 204 -88 5 1171 929 79 0 0 chr13 76870220 76870347 -43413965 + B1_Mm SINE Alu 11 137 -10 5 1171 221 59 98 0 chr13 76870801 76870852 -43413460 + CT-rich Low_complexity Low_complexity 5 60 0 5 1171 189 0 0 0 chr13 76870868 76870889 -43413423 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1171 275 130 19 0 chr13 76872443 76872497 -43411815 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 5 1171 282 268 44 44 chr13 76874487 76874577 -43409735 + PB1D10 SINE Alu 25 114 -3 5 1171 909 269 33 42 chr13 76874627 76874934 -43409378 + Lx8 LINE L1 7169 7472 -1 5 1171 21 0 0 0 chr13 76874999 76875020 -43409292 + AT_rich Low_complexity Low_complexity 1 21 0 5 1171 190 194 30 0 chr13 76876234 76876301 -43408011 + (TAGA)n Simple_repeat Simple_repeat 3 71 0 5 1171 31 0 0 0 chr13 76876418 76876449 -43407863 + AT_rich Low_complexity Low_complexity 1 31 0 5 1171 1203 84 50 22 chr13 76876736 76876918 -43407394 - B2_Mm2 SINE B2 -8 187 1 5 1171 2449 167 26 32 chr13 76877339 76877840 -43406472 - Lx LINE L1 0 6654 6157 5 1171 297 0 0 0 chr13 76877840 76877873 -43406439 + (CTG)n Simple_repeat Simple_repeat 1 33 0 5 1171 671 0 0 12 chr13 76877873 76877953 -43406359 + (TTC)n Simple_repeat Simple_repeat 1 79 0 5 1171 1034 68 14 0 chr13 76877958 76878105 -43406207 - L1_Mus2 LINE L1 0 6566 6418 5 1171 485 78 0 0 chr13 76878105 76878169 -43406143 + L1_Mus2 LINE L1 6164 6227 -339 5 1171 1901 140 6 37 chr13 76878121 76878448 -43405864 - Lx LINE L1 -448 6206 5890 5 1171 305 246 0 32 chr13 76878665 76878850 -43405462 + (TTG)n Simple_repeat Simple_repeat 1 179 0 5 1171 320 354 0 10 chr13 76879600 76879697 -43404615 + RSINE1 SINE B4 11 106 -59 5 1171 623 37 12 0 chr13 76879697 76879779 -43404533 + (CA)n Simple_repeat Simple_repeat 2 84 0 5 1171 222 37 0 0 chr13 76879780 76879807 -43404505 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 5 1171 1137 68 7 0 chr13 76880020 76880166 -43404146 - B1_Mus2 SINE Alu 0 147 1 5 1171 266 0 0 29 chr13 76882276 76882311 -43402001 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1171 1099 51 0 0 chr13 76882311 76882449 -43401863 - B1_Mm SINE Alu -9 138 1 5 1171 187 269 192 0 chr13 76882900 76882978 -43401334 - MIR SINE MIR -64 144 52 5 1171 2297 211 57 19 chr13 76883459 76883693 -43400619 + Lx9 LINE L1 6971 7202 -442 5 1171 1223 41 0 0 chr13 76883693 76883839 -43400473 + B1_Mm SINE Alu 2 147 0 5 1171 209 57 0 28 chr13 76883841 76883877 -43400435 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1171 2297 211 57 19 chr13 76883877 76884223 -43400089 + Lx9 LINE L1 7203 7573 -71 5 1171 22 35 0 0 chr13 76884238 76884267 -43400045 + AT_rich Low_complexity Low_complexity 1 29 0 5 1171 312 400 42 0 chr13 76884285 76884405 -43399907 + B3A SINE B2 41 165 -33 5 1171 3051 78 5 10 chr13 76884405 76884807 -43399505 - MTB LTR MaLR 0 400 1 5 1171 267 31 0 0 chr13 76884819 76884851 -43399461 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1171 25 0 0 0 chr13 76885828 76885853 -43398459 + AT_rich Low_complexity Low_complexity 1 25 0 5 1171 259 189 38 0 chr13 76887029 76887082 -43397230 + GA-rich Low_complexity Low_complexity 4 58 0 5 1171 27 29 0 0 chr13 76887539 76887573 -43396739 + AT_rich Low_complexity Low_complexity 1 34 0 5 1171 835 64 0 0 chr13 76889056 76889165 -43395147 + B2_Mm2 SINE B2 5 113 -82 5 1171 301 362 9 0 chr13 76889235 76889351 -43394961 - MER5A DNA MER1_type -61 128 12 5 1171 736 285 130 14 chr13 76889805 76890097 -43394215 - MER2 DNA MER2_type -19 326 1 5 1171 7370 100 30 1 chr13 76890954 76892280 -43392032 - L1_Mus3 LINE L1 -2 6636 5264 5 1171 4539 130 50 30 chr13 76892280 76893229 -43391083 - L1VL1 LINE L1 -2351 1347 338 5 1171 7298 38 86 0 chr13 76893229 76894130 -43390182 - RLTR13A3 LTR ERVK 0 978 1 5 1171 4539 154 67 48 chr13 76894130 76894312 -43390000 - L1VL1 LINE L1 -6085 337 191 5 1171 313 286 14 0 chr13 76894728 76894798 -43389514 + ID4_ SINE ID 6 76 -7 5 1171 239 348 56 0 chr13 76894870 76894959 -43389353 - Charlie15a DNA MER1_type 0 224 131 5 1171 27 49 0 0 chr13 76895536 76895577 -43388735 + AT_rich Low_complexity Low_complexity 1 41 0 5 1171 21 0 0 0 chr13 76896079 76896100 -43388212 + AT_rich Low_complexity Low_complexity 1 21 0 5 1171 282 200 60 0 chr13 76896650 76896750 -43387562 + A-rich Low_complexity Low_complexity 2 107 0 5 1171 23 54 0 0 chr13 76896928 76896965 -43387347 + AT_rich Low_complexity Low_complexity 1 37 0 5 1171 237 300 43 52 chr13 76897156 76897272 -43387040 + MIR SINE MIR 138 252 -10 5 1171 197 33 33 0 chr13 76900814 76900844 -43383468 + (TTTTTG)n Simple_repeat Simple_repeat 5 35 0 5 1171 207 0 0 0 chr13 76900860 76900883 -43383429 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1171 266 362 183 30 chr13 76901049 76901655 -43382657 + L2a LINE L2 1915 2613 -806 5 1171 21 0 0 0 chr13 76902289 76902310 -43382002 + AT_rich Low_complexity Low_complexity 1 21 0 5 1171 361 346 19 37 chr13 76902331 76902493 -43381819 - RSINE1 SINE B4 -5 160 2 5 1171 260 304 161 25 chr13 76902504 76902747 -43381565 + L2a LINE L2 2806 3081 -338 5 1171 283 308 180 6 chr13 76902827 76903010 -43381302 + L2a LINE L2 3192 3406 -20 5 1171 25909 130 12 45 chr13 76903470 76906781 -43377531 + L1VL1 LINE L1 409 3693 -2190 5 1171 246 198 56 111 chr13 76906781 76906889 -43377423 + MT2B LTR ERVL 163 264 -337 5 1171 662 75 0 11 chr13 76906830 76906925 -43377387 + B1_Mus2 SINE Alu 54 147 0 5 1171 25909 130 12 45 chr13 76906925 76908921 -43375391 + L1VL1 LINE L1 3694 5675 -208 5 1171 1742 119 36 4 chr13 76908921 76909200 -43375112 + L1_Mus3 LINE L1 6335 6622 -16 5 1171 495 0 0 0 chr13 76909200 76909255 -43375057 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 5 1171 542 276 221 36 chr13 76909542 76910423 -43373889 - L1M2 LINE L1 -1050 5096 4010 5 1171 248 380 36 14 chr13 76910722 76910861 -43373451 - MIRb SINE MIR -110 158 17 5 1171 529 233 67 0 chr13 76912478 76912628 -43371684 - Charlie7 DNA MER1_type -1851 761 602 5 1171 17370 138 26 44 chr13 76912628 76915567 -43368745 - Lx LINE L1 -13 6641 3845 5 1171 221 0 35 0 chr13 76915567 76915596 -43368716 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1171 17370 156 29 54 chr13 76915596 76916934 -43367378 - Lx LINE L1 -2039 3844 2457 5 1171 24153 110 9 12 chr13 76916937 76921420 -43362892 - L1_Mus2 LINE L1 -1 6565 2077 5 1171 34897 79 8 4 chr13 76921433 76927559 -43356753 - L1Md_F2 LINE L1 -12 6570 422 5 1171 3100 134 234 14 chr13 76927562 76927918 -43356394 - L1_Mus2 LINE L1 -3793 2090 1743 5 1171 4530 41 0 0 chr13 76927918 76928456 -43355856 - L1Md_T LINE L1 -2 6580 6043 5 1171 3100 133 87 7 chr13 76928456 76929008 -43355304 - L1_Mus2 LINE L1 -4141 1742 1073 5 1171 5448 93 5 4 chr13 76929021 76929791 -43354521 - L1_Mus2 LINE L1 -7 6559 5789 5 1171 411 77 92 0 chr13 76929825 76929890 -43354422 - B1_Mus2 SINE Alu -1 146 76 5 1171 28866 132 31 5 chr13 76929890 76935225 -43349087 - L1Md_F LINE L1 -86 5797 327 5 1171 4286 95 20 22 chr13 76935227 76935813 -43348499 - MusHAL1 LINE L1 -1449 1263 680 5 1171 2763 99 18 2 chr13 76935813 76936207 -43348105 - MTB LTR MaLR 0 400 1 5 1171 4286 95 20 22 chr13 76936207 76936311 -43348001 - MusHAL1 LINE L1 -2033 679 574 5 1171 580 239 34 34 chr13 76936679 76936826 -43347486 + B1_Mur1 SINE Alu 1 147 -2 5 1171 654 101 0 0 chr13 76937033 76937132 -43347180 + L1_Mus2 LINE L1 6468 6566 0 5 1171 220 277 0 0 chr13 76937239 76937286 -43347026 + polypurine Low_complexity Low_complexity 2 48 0 5 1171 334 272 20 93 chr13 76937423 76937573 -43346739 - MIR3 SINE MIR -39 169 31 5 1171 24 53 0 0 chr13 76938700 76938738 -43345574 + AT_rich Low_complexity Low_complexity 1 38 0 5 1171 513 68 0 0 chr13 76938746 76938820 -43345492 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 1172 180 0 0 0 chr13 76939416 76939436 -43344876 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 5 1172 591 312 72 0 chr13 76939866 76940004 -43344308 - RSINE1 SINE B4 -17 148 1 5 1172 378 0 0 0 chr13 76941030 76941072 -43343240 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1172 606 51 0 0 chr13 76942595 76942673 -43341639 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 1172 23 33 0 0 chr13 76943598 76943628 -43340684 + AT_rich Low_complexity Low_complexity 1 30 0 5 1172 1006 161 166 0 chr13 76947638 76947831 -43336481 - URR1B DNA MER1_type 0 225 1 5 1172 402 21 0 0 chr13 76948855 76948902 -43335410 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1172 531 0 0 0 chr13 76948902 76948960 -43335352 + (GA)n Simple_repeat Simple_repeat 1 59 0 5 1172 204 96 75 19 chr13 76950586 76950639 -43333673 + (TA)n Simple_repeat Simple_repeat 1 56 0 5 1172 2647 131 17 0 chr13 76951049 76951470 -43332842 + L1_Mus4 LINE L1 6208 6635 -1 5 1172 376 280 119 40 chr13 76952457 76952658 -43331654 + L3 LINE CR1 3401 3617 -872 5 1172 216 261 0 0 chr13 76952718 76952783 -43331529 + (TA)n Simple_repeat Simple_repeat 2 66 0 5 1172 591 53 0 0 chr13 76953373 76953448 -43330864 + (CA)n Simple_repeat Simple_repeat 1 75 0 5 1172 304 237 111 20 chr13 76953654 76953753 -43330559 - Lx7 LINE L1 0 7696 7589 5 1172 315 0 0 0 chr13 76953754 76953789 -43330523 + (TTCC)n Simple_repeat Simple_repeat 1 35 0 5 1172 1103 79 11 27 chr13 76953789 76953972 -43330340 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1172 410 238 119 51 chr13 76954012 76954247 -43330065 - Lx7 LINE L1 -70 7626 7376 5 1172 845 43 0 0 chr13 76954350 76954466 -43329846 - L1Md_A LINE L1 0 6582 6467 5 1172 264 200 0 0 chr13 76954663 76954723 -43329589 + (CATATA)n Simple_repeat Simple_repeat 6 65 0 6 1172 263 370 34 20 chr13 76954968 76955117 -43329195 + L3 LINE CR1 4251 4401 -88 5 1172 317 399 20 0 chr13 76955884 76956032 -43328280 + Charlie1 DNA MER1_type 13 163 -2618 6 1172 220 100 0 0 chr13 76956905 76956935 -43327377 + L2a LINE L2 3382 3411 -15 6 1172 205 351 68 0 chr13 76958589 76958663 -43325649 + L2a LINE L2 3221 3299 -76 6 1172 600 201 95 27 chr13 76959618 76959766 -43324546 - Lx9 LINE L1 -172 7472 7315 6 1172 243 300 88 26 chr13 76960432 76960545 -43323767 + L2a LINE L2 3307 3426 0 6 1172 513 0 0 0 chr13 76961585 76961642 -43322670 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1172 276 30 0 0 chr13 76962398 76962431 -43321881 + (TG)n Simple_repeat Simple_repeat 2 34 0 6 1172 285 75 0 0 chr13 76964738 76964778 -43319534 + (CTG)n Simple_repeat Simple_repeat 3 42 0 6 1172 187 260 242 38 chr13 76965204 76965336 -43318976 + L3 LINE CR1 2812 2970 -1519 6 1172 273 336 6 75 chr13 76969214 76969375 -43314937 - MIR SINE MIR -3 259 110 6 1172 192 182 0 0 chr13 76970279 76970323 -43313989 + GA-rich Low_complexity Low_complexity 2 45 0 6 1172 1011 139 0 0 chr13 76971031 76971197 -43313115 + (TTTC)n Simple_repeat Simple_repeat 3 168 0 6 1172 390 91 0 0 chr13 76971199 76971254 -43313058 + (TCC)n Simple_repeat Simple_repeat 3 57 0 6 1172 227 73 49 0 chr13 76971256 76971297 -43313015 + (TCTCTG)n Simple_repeat Simple_repeat 6 48 0 6 1172 240 35 0 0 chr13 76972098 76972127 -43312185 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 1172 210 235 0 0 chr13 76972129 76972180 -43312132 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1172 616 330 11 6 chr13 76974759 76974942 -43309370 - B4A SINE B4 -12 280 97 6 1172 264 242 23 0 chr13 76977680 76977812 -43306500 + CT-rich Low_complexity Low_complexity 2 136 0 6 1172 1473 39 0 0 chr13 76979711 76979891 -43304421 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 6 1172 181 263 0 17 chr13 76980999 76981057 -43303255 + L3 LINE CR1 1140 1196 -3293 6 1172 230 393 0 0 chr13 76985011 76985123 -43299189 - L2c LINE L2 -224 3163 3052 6 1172 23 0 0 0 chr13 76986667 76986690 -43297622 + AT_rich Low_complexity Low_complexity 1 23 0 6 1172 281 433 17 6 chr13 76986996 76987175 -43297137 - MER5A DNA MER1_type -4 185 5 6 1172 543 133 0 0 chr13 76987237 76987342 -43296970 + (CA)n Simple_repeat Simple_repeat 2 106 0 6 1172 391 287 9 9 chr13 76988954 76989063 -43295249 - PB1D10 SINE Alu -8 109 1 6 1172 571 354 0 0 chr13 76992721 76992885 -43291427 - RSINE1 SINE B4 0 165 2 6 1172 285 387 50 29 chr13 76994328 76994570 -43289742 - MIR SINE MIR -14 248 2 6 1172 250 321 48 0 chr13 76995399 76995483 -43288829 + ID SINE ID 2 89 -135 6 1172 356 121 45 0 chr13 76997775 76997841 -43286471 + G-rich Low_complexity Low_complexity 5 73 0 6 1172 471 35 0 0 chr13 76998118 76998175 -43286137 + (TTCC)n Simple_repeat Simple_repeat 3 59 0 6 1172 26 0 0 0 chr13 76998180 76998206 -43286106 + AT_rich Low_complexity Low_complexity 1 26 0 6 1172 2219 172 48 8 chr13 76998217 76998616 -43285696 + MTC LTR MaLR 3 417 -4 6 1172 5363 225 79 26 chr13 76998639 77000000 -43284312 - Lx6 LINE L1 -212 7248 5816 6 1172 3951 158 31 135 chr13 77000000 77001107 -43283205 - L1_Mur3 LINE L1 -66 5814 4823 1 1172 821 103 0 8 chr13 77001111 77001238 -43283074 + (TTC)n Simple_repeat Simple_repeat 1 126 0 2 1172 21 0 0 0 chr13 77001708 77001729 -43282583 + AT_rich Low_complexity Low_complexity 1 21 0 3 1172 828 267 16 5 chr13 77001796 77001984 -43282328 - B3 SINE B2 0 216 27 4 1172 3374 50 2 0 chr13 77001986 77002405 -43281907 - L1Md_F2 LINE L1 -12 6570 6151 5 1172 1860 60 4 0 chr13 77002405 77002653 -43281659 - L1_Mm LINE L1 -295 5588 5340 6 1172 4257 23 12 0 chr13 77003553 77004040 -43280272 - MT2_Mm LTR ERVL 0 493 1 7 1172 947 264 70 107 chr13 77004074 77004503 -43279809 - MTD LTR MaLR -3 416 4 8 1172 2185 110 240 0 chr13 77006087 77006516 -43277796 - RLTR47_MM LTR ERV1 0 532 1 9 1172 369 0 0 0 chr13 77006971 77007012 -43277300 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1172 1042 363 178 14 chr13 77007430 77008318 -43275994 - L4 LINE RTE -548 1481 448 1 1172 196 359 154 15 chr13 77008430 77008560 -43275752 - L4 LINE RTE -1725 304 157 1 1172 425 284 57 49 chr13 77008641 77008763 -43275549 + RSINE1 SINE B4 2 124 -41 1 1172 600 111 0 0 chr13 77008765 77008855 -43275457 + (CACG)n Simple_repeat Simple_repeat 2 91 0 1 1172 22 0 0 0 chr13 77008893 77008915 -43275397 + AT_rich Low_complexity Low_complexity 1 22 0 1 1172 284 203 15 45 chr13 77009671 77009738 -43274574 - ID4_ SINE ID -18 65 1 1 1172 293 292 75 0 chr13 77009753 77009859 -43274453 - PB1D10 SINE Alu 0 117 4 1 1172 2250 84 15 24 chr13 77010559 77010840 -43273472 + ORR1A2 LTR MaLR 1 285 -42 1 1172 6373 65 11 5 chr13 77010840 77011643 -43272669 - RLTR13C2 LTR ERVK 0 808 1 1 1172 2250 84 15 24 chr13 77011643 77011690 -43272622 + ORR1A2 LTR MaLR 286 326 -1 1 1172 303 262 36 48 chr13 77011941 77012025 -43272287 + B1F SINE Alu 20 102 -47 1 1172 24 0 0 0 chr13 77012025 77012049 -43272263 + AT_rich Low_complexity Low_complexity 1 24 0 2 1172 427 283 107 50 chr13 77012406 77012648 -43271664 - Lx8 LINE L1 0 7473 7218 2 1172 578 258 84 0 chr13 77013079 77013246 -43271066 + B3A SINE B2 3 183 -15 2 1172 26 82 0 0 chr13 77013337 77013398 -43270914 + AT_rich Low_complexity Low_complexity 1 61 0 2 1172 385 272 158 32 chr13 77015313 77015449 -43268863 + B3 SINE B2 1 149 -67 2 1172 411 21 0 0 chr13 77015449 77015497 -43268815 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1172 385 272 158 32 chr13 77015497 77015550 -43268762 + B3 SINE B2 150 213 -3 2 1172 673 297 144 28 chr13 77015600 77016206 -43268106 - L1MB5 LINE L1 -159 6015 5340 2 1172 195 176 66 0 chr13 77016208 77016299 -43268013 + (TA)n Simple_repeat Simple_repeat 1 97 0 2 1172 5708 128 10 2 chr13 77018896 77019818 -43264494 - L1_Mus3 LINE L1 -138 5745 4817 2 1172 6618 71 18 2 chr13 77019818 77020696 -43263616 + L1_Mus3 LINE L1 5744 6635 -3 2 1172 552 73 0 0 chr13 77022750 77022832 -43261480 + (TC)n Simple_repeat Simple_repeat 1 82 0 2 1172 184 220 102 71 chr13 77024236 77024334 -43259978 - L2 LINE L2 -1066 2353 2253 3 1172 218 244 169 25 chr13 77024554 77024672 -43259640 + MIRc SINE MIR 9 143 -125 3 1172 470 321 19 12 chr13 77025041 77025202 -43259110 + RSINE1 SINE B4 4 165 0 3 1172 341 236 11 33 chr13 77025225 77025405 -43258907 + (CATA)n Simple_repeat Simple_repeat 4 179 0 3 1172 328 271 0 23 chr13 77025407 77025494 -43258818 + (CA)n Simple_repeat Simple_repeat 2 86 0 3 1172 196 210 0 69 chr13 77025526 77025613 -43258699 + (CATATA)n Simple_repeat Simple_repeat 6 86 0 3 1172 342 0 0 0 chr13 77025909 77025947 -43258365 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1172 1202 272 52 14 chr13 77026137 77026502 -43257810 - MTEa LTR MaLR 0 379 1 3 1172 182 283 0 0 chr13 77026502 77026548 -43257764 - MIRc SINE MIR -56 212 167 3 1172 227 371 60 15 chr13 77027153 77027287 -43257025 - MIRb SINE MIR -48 220 81 3 1172 730 234 0 7 chr13 77027449 77027591 -43256721 - ID_B1 SINE B4 -5 219 79 4 1172 552 323 13 9 chr13 77029010 77029238 -43255074 - Lx8 LINE L1 -195 7278 7050 4 1172 195 250 182 48 chr13 77029687 77029813 -43254499 - MIR SINE MIR -41 221 79 4 1172 237 217 0 0 chr13 77030414 77030460 -43253852 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 4 1172 445 0 0 0 chr13 77031763 77031821 -43252491 + L1Md_T LINE L1 6525 6582 0 4 1172 1333 60 48 16 chr13 77031832 77032019 -43252293 + B2_Mm2 SINE B2 1 193 -2 4 1172 813 95 0 0 chr13 77032848 77032964 -43251348 + (GA)n Simple_repeat Simple_repeat 1 116 0 4 1172 917 85 4 20 chr13 77033040 77033197 -43251115 + L1_Mus2 LINE L1 6410 6592 -46 4 1172 1144 68 7 0 chr13 77033197 77033343 -43250969 - B1_Mus1 SINE Alu -1 147 1 4 1172 619 168 25 122 chr13 77033343 77033382 -43250930 + L1_Mus2 LINE L1 6593 6631 -7 4 1172 206 296 0 0 chr13 77034648 77034702 -43249610 - MIRm SINE MIR -14 262 209 4 1172 11378 136 29 15 chr13 77037006 77039610 -43244702 - Lx LINE L1 -5 6649 3974 5 1172 254 77 0 0 chr13 77039611 77039650 -43244662 - L1VL1 LINE L1 -574 3124 3086 5 1172 11035 109 12 6 chr13 77039646 77041528 -43242784 - L1VL1 LINE L1 -870 2828 891 5 1172 1150 26 26 13 chr13 77041528 77041683 -43242629 - L1Md_F3 LINE L1 -2 6582 6426 5 1172 4510 139 71 48 chr13 77041683 77042405 -43241907 - L1VL1 LINE L1 -5532 890 195 5 1172 36801 42 3 14 chr13 77042413 77048596 -43235716 - L1Md_A LINE L1 -2 6580 466 5 1172 258 81 0 0 chr13 77048793 77048830 -43235482 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 5 1172 756 246 156 4 chr13 77048947 77049184 -43235128 + MER73 LTR ERVL 1 273 -371 5 1172 558 322 45 110 chr13 77049215 77049505 -43234807 + MER73 LTR ERVL 366 636 -8 5 1172 204 67 0 0 chr13 77049634 77049664 -43234648 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 5 1172 318 316 71 2 chr13 77049675 77049778 -43234534 + B1F1 SINE Alu 3 112 -5 5 1172 1246 116 21 5 chr13 77050491 77050681 -43233631 - B2_Mm2 SINE B2 -1 194 2 5 1172 7517 79 3 1 chr13 77050715 77051779 -43232533 - L1_Mus3 LINE L1 -20 6618 5547 5 1172 293 198 68 19 chr13 77052305 77052408 -43231904 + Lx5 LINE L1 6938 7045 -5 6 1172 889 196 98 23 chr13 77052425 77052639 -43231673 + Lx5 LINE L1 6814 7043 -7 6 1172 3140 64 0 0 chr13 77052978 77053371 -43230941 - L1_Mus1 LINE L1 0 6567 6175 6 1172 527 151 10 189 chr13 77053476 77053672 -43230640 - Lx4B LINE L1 -4 7054 6894 6 1172 360 178 0 0 chr13 77053692 77053765 -43230547 + (TGAA)n Simple_repeat Simple_repeat 1 73 0 6 1172 699 324 68 52 chr13 77053900 77054151 -43230161 - B4A SINE B4 -1 291 37 6 1172 1583 63 0 0 chr13 77054289 77054496 -43229816 - L1_Mus2 LINE L1 -220 6346 6140 6 1172 1273 106 10 0 chr13 77054496 77054694 -43229618 + L1_Mus2 LINE L1 6365 6564 -2 6 1172 184 345 196 18 chr13 77055181 77055349 -43228963 + MIRb SINE MIR 57 254 -14 6 1172 1198 41 0 0 chr13 77056917 77057063 -43227249 - B1_Mus2 SINE Alu -1 146 1 6 1172 225 0 0 0 chr13 77057738 77057763 -43226549 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1172 1212 82 0 0 chr13 77060221 77060391 -43223921 + (TC)n Simple_repeat Simple_repeat 1 170 0 7 1172 281 218 0 5 chr13 77061759 77061818 -43222494 + PB1D10 SINE Alu 1 56 -92 7 1172 1198 191 5 18 chr13 77063849 77064068 -43220244 + B3 SINE B2 1 216 0 7 1172 21 82 0 0 chr13 77064102 77064151 -43220161 + AT_rich Low_complexity Low_complexity 1 49 0 7 1172 1068 103 0 0 chr13 77066041 77066197 -43218115 + (GA)n Simple_repeat Simple_repeat 2 157 0 7 1172 673 314 83 19 chr13 77069151 77069440 -43214872 - MLT1E2 LTR MaLR -2 651 352 7 1172 259 226 28 123 chr13 77069813 77069919 -43214393 + MLT1D LTR MaLR 112 207 -420 7 146 728 276 122 28 chr13 77070258 77070545 -43213767 + MLT1D LTR MaLR 178 491 -14 7 1173 790 258 126 19 chr13 77070844 77071113 -43213199 - Lx8 LINE L1 -2 7471 7174 7 1173 193 204 102 0 chr13 77071122 77071171 -43213141 + L4 LINE RTE 867 920 -1109 7 1173 933 131 0 0 chr13 77071214 77071367 -43212945 + (TA)n Simple_repeat Simple_repeat 1 153 0 7 1173 1610 299 129 22 chr13 77071940 77072589 -43211723 - Charlie24 DNA MER1_type -807 1643 925 8 1173 584 341 17 105 chr13 77072869 77073108 -43211204 + ID_B1 SINE B4 5 222 -2 8 1173 582 311 78 55 chr13 77073115 77073476 -43210836 - Charlie24 DNA MER1_type -1898 552 184 8 1173 715 309 88 15 chr13 77074065 77074325 -43209987 - B4A SINE B4 -11 281 3 8 1173 22 0 0 0 chr13 77075295 77075317 -43208995 + AT_rich Low_complexity Low_complexity 1 22 0 8 1173 380 248 70 35 chr13 77075861 77076003 -43208309 + B1F SINE Alu 1 147 -2 8 1173 258 218 64 0 chr13 77076035 77076113 -43208199 - Lx8 LINE L1 -106 7367 7285 8 1173 351 254 151 36 chr13 77076107 77076246 -43208066 + Lx8 LINE L1 7112 7266 -207 8 1173 562 321 0 0 chr13 77076867 77077001 -43207311 + RSINE1 SINE B4 3 136 -29 8 1173 387 0 0 0 chr13 77078902 77078945 -43205367 + (TA)n Simple_repeat Simple_repeat 2 44 0 8 1173 216 328 15 60 chr13 77079110 77079243 -43205069 - L2 LINE L2 -933 2486 2360 8 1173 316 321 38 0 chr13 77080529 77080635 -43203677 - HAL1-2a_MD LINE L1 -499 2525 2416 8 1173 2247 108 6 22 chr13 77080635 77080996 -43203316 + L1_Mus3 LINE L1 6274 6628 -10 9 1173 569 280 53 23 chr13 77081205 77081468 -43202844 - L1M2 LINE L1 -3477 2666 2396 9 1173 1333 247 216 37 chr13 77081495 77082087 -43202225 - Lx8 LINE L1 -4 7469 6772 9 1173 879 265 42 35 chr13 77082069 77082358 -43201954 - Lx8 LINE L1 -934 6539 6249 9 1173 357 228 43 0 chr13 77082707 77082799 -43201513 - L1M2 LINE L1 -3813 2330 2235 9 1173 255 170 0 0 chr13 77082809 77082856 -43201456 + (TATG)n Simple_repeat Simple_repeat 2 48 0 9 1173 477 226 75 0 chr13 77082856 77082949 -43201363 - PB1D9 SINE Alu -20 100 1 9 1173 247 329 93 12 chr13 77082876 77082962 -43201350 - B4A SINE B4 -127 165 73 9 1173 360 64 0 0 chr13 77083168 77083215 -43201097 + (TA)n Simple_repeat Simple_repeat 2 48 0 9 1173 180 0 0 0 chr13 77083338 77083358 -43200954 + (A)n Simple_repeat Simple_repeat 1 20 0 9 1173 266 324 73 9 chr13 77084955 77085064 -43199248 + MER94 DNA AcHobo 3 118 -16 9 1173 363 358 29 22 chr13 77085246 77085383 -43198929 + ID_B1 SINE B4 82 219 -5 9 1173 225 183 98 16 chr13 77086870 77086931 -43197381 - MLT1I LTR MaLR -3 408 343 1 1173 501 234 47 0 chr13 77086946 77087053 -43197259 + Lx4A LINE L1 6837 6948 -110 1 1173 636 229 25 169 chr13 77087081 77087125 -43197187 - ORR1D1 LTR MaLR -167 207 165 1 1173 294 29 0 0 chr13 77087125 77087160 -43197152 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 1 1173 636 229 25 169 chr13 77087160 77087357 -43196955 - ORR1D1 LTR MaLR -210 164 1 1 1173 513 47 0 0 chr13 77088477 77088541 -43195771 + (TTTTC)n Simple_repeat Simple_repeat 2 65 0 1 1173 293 290 122 42 chr13 77089129 77089392 -43194920 + Lx9 LINE L1 5825 6108 -1536 1 1173 201 213 0 0 chr13 77089481 77089528 -43194784 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1 1173 466 16 0 31 chr13 77089927 77089992 -43194320 + (TG)n Simple_repeat Simple_repeat 1 63 0 1 1173 552 277 34 0 chr13 77090007 77090126 -43194186 - RSINE1 SINE B4 -39 126 4 1 1173 278 349 9 35 chr13 77090820 77090933 -43193379 + PB1D10 SINE Alu 6 115 -2 1 1173 198 103 0 0 chr13 77092048 77092077 -43192235 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1173 191 294 0 0 chr13 77092137 77092188 -43192124 - L2a LINE L2 -1 3425 3375 1 1173 195 277 21 0 chr13 77092161 77092208 -43192104 - MIRb SINE MIR -21 247 200 1 1173 486 233 33 8 chr13 77092217 77092338 -43191974 - L1MA4 LINE L1 -53 6247 6124 1 1173 1182 156 60 14 chr13 77092691 77092906 -43191406 - URR1A DNA MER1_type 0 226 2 1 1173 915 104 0 0 chr13 77093035 77093160 -43191152 - L1VL4 LINE L1 -5863 439 315 1 1173 6095 129 14 39 chr13 77093473 77094468 -43189844 + L1VL4 LINE L1 1 970 -5332 1 1173 479 17 17 0 chr13 77094468 77094528 -43189784 + (CAAAA)n Simple_repeat Simple_repeat 3 63 0 1 1173 1128 81 70 0 chr13 77094528 77094589 -43189723 + MusHAL1 LINE L1 124 197 -2515 1 1173 7815 117 19 3 chr13 77094590 77094625 -43189687 + L1_Mus1 LINE L1 4700 4734 -1149 1 1173 243 0 0 0 chr13 77094625 77094652 -43189660 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1173 7830 87 10 2 chr13 77094652 77096465 -43187847 + L1_Mus1 LINE L1 4735 6567 0 1 1173 16729 86 24 8 chr13 77096482 77098359 -43185953 + MusHAL1 LINE L1 187 2097 -615 1 1173 213 65 0 0 chr13 77098359 77098390 -43185922 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1173 16729 86 24 8 chr13 77098390 77098999 -43185313 + MusHAL1 LINE L1 2098 2711 -1 1 1173 6204 140 16 1 chr13 77099165 77100149 -43184163 + Lx LINE L1 5656 6654 0 1 1173 294 270 16 0 chr13 77100826 77100889 -43183423 + ID4_ SINE ID 7 70 -13 1 1173 396 0 0 0 chr13 77100909 77100953 -43183359 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1173 374 240 39 8 chr13 77101087 77101217 -43183095 - Lx9 LINE L1 -24 7620 7487 1 1173 2278 108 57 106 chr13 77101248 77101702 -43182610 - Lx2A LINE L1 -1 7007 6576 1 1173 6462 135 21 30 chr13 77101699 77103276 -43181036 - L1VL2 LINE L1 -1497 2118 557 1 1173 383 229 125 0 chr13 77103606 77103702 -43180610 - Lx9 LINE L1 -179 7465 7358 1 1173 369 291 30 54 chr13 77103842 77104058 -43180254 + MER102c DNA MER1_type 1 235 -96 1 1173 2085 118 9 16 chr13 77105098 77105416 -43178896 - Lx3A LINE L1 -25 6956 6641 1 1173 193 328 0 0 chr13 77108374 77108441 -43175871 - L2c LINE L2 -266 3121 3055 1 1173 180 402 9 81 chr13 77109375 77109486 -43174826 + L2b LINE L2 3254 3356 -19 1 1173 272 374 0 0 chr13 77109641 77109740 -43174572 + (TG)n Simple_repeat Simple_repeat 2 100 0 1 1173 685 81 0 0 chr13 77110461 77110547 -43173765 - L1_Mm LINE L1 -308 5575 5490 1 1173 249 152 114 57 chr13 77110499 77110569 -43173743 + L1Md_F2 LINE L1 5512 5585 -298 1 1173 7694 63 0 16 chr13 77110570 77111571 -43172741 + L1Md_F2 LINE L1 5587 6571 -11 1 1173 846 49 8 24 chr13 77111596 77111722 -43172590 + (GAAA)n Simple_repeat Simple_repeat 3 126 0 1 1173 471 318 64 61 chr13 77111836 77112131 -43172181 + L1MC4a LINE L1 5554 5849 -2033 1 1173 8249 153 3 9 chr13 77112508 77112901 -43171411 + Lx LINE L1 4517 4902 -981 1 1173 5987 150 34 5 chr13 77112901 77113832 -43170480 + RMER17B LTR ERVK 1 958 0 1 1173 8249 136 11 7 chr13 77113832 77115576 -43168736 + Lx LINE L1 4903 6654 0 1 1173 470 31 0 15 chr13 77116756 77116821 -43167491 + (TTTA)n Simple_repeat Simple_repeat 1 64 0 1 1173 8750 103 19 38 chr13 77116821 77118029 -43166283 - Lx3A LINE L1 -14 6967 5800 1 1173 1332 94 33 6 chr13 77118029 77118211 -43166101 + B2_Mm1a SINE B2 2 188 -5 1 1173 8750 103 19 38 chr13 77118211 77118363 -43165949 - Lx3A LINE L1 -1182 5799 5632 1 1173 2166 276 109 10 chr13 77118445 77119158 -43165154 - Lx9 LINE L1 -468 7176 6393 1 1173 26 30 0 0 chr13 77119884 77119917 -43164395 + AT_rich Low_complexity Low_complexity 1 33 0 1 1173 2792 151 68 7 chr13 77119918 77120373 -43163939 - Lx4A LINE L1 -2 7056 6574 1 1173 23567 164 14 72 chr13 77120728 77124717 -43159595 + L1VL4 LINE L1 572 4196 -1687 1 1173 234 0 0 0 chr13 77124717 77124743 -43159569 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 1173 23567 155 15 82 chr13 77124743 77126297 -43158015 + L1VL4 LINE L1 4197 5782 -101 1 1173 9575 49 6 2 chr13 77126293 77128180 -43156132 - L1Md_F2 LINE L1 -1 6581 4686 1 1173 2291 107 216 30 chr13 77128180 77128642 -43155670 - RLTR6_Mm LTR ERV1 -70 584 37 1 1173 64916 15 14 2 chr13 77128752 77136076 -43148236 - RLTR6-int LTR ERV1 0 7778 368 1 1173 2313 104 21 42 chr13 77136076 77136458 -43147854 - L1Md_Gf LINE L1 -5864 658 285 1 1173 6274 105 2 17 chr13 77136462 77137337 -43146975 + L1_Mus3 LINE L1 5769 6630 -8 1 1173 306 50 0 0 chr13 77137635 77137675 -43146637 + (CAGA)n Simple_repeat Simple_repeat 1 40 0 1 1173 216 293 52 0 chr13 77137675 77137733 -43146579 - ID SINE ID -160 64 4 1 1173 305 212 0 33 chr13 77137768 77137890 -43146422 + GA-rich Low_complexity Low_complexity 1 118 0 1 1173 4678 38 2 0 chr13 77139454 77139980 -43144332 - L1Md_F2 LINE L1 -1 6581 6055 1 1173 225 254 18 0 chr13 77140560 77140615 -43143697 + GA-rich Low_complexity Low_complexity 5 60 0 1 1173 258 291 12 37 chr13 77140717 77140799 -43143513 - ORR1E LTR MaLR -274 85 6 1 1173 213 39 0 0 chr13 77141467 77141493 -43142819 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1173 988 64 184 16 chr13 77141566 77141744 -43142568 + L1_Mus1 LINE L1 6384 6582 0 1 1173 233 210 46 19 chr13 77142551 77142634 -43141678 + MIRc SINE MIR 107 193 -75 1 1173 366 23 0 0 chr13 77142815 77142858 -43141454 + (CAA)n Simple_repeat Simple_repeat 3 45 0 1 1173 320 231 39 0 chr13 77142870 77142948 -43141364 + ID SINE ID 2 82 -142 1 1173 500 214 6 0 chr13 77143509 77143682 -43140630 + (TG)n Simple_repeat Simple_repeat 2 175 0 1 1173 294 195 0 0 chr13 77143764 77143841 -43140471 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1173 1783 312 106 18 chr13 77144451 77145363 -43138949 + Lx8 LINE L1 6479 7471 -2 1 1173 284 219 46 15 chr13 77145590 77145655 -43138657 - ID4 SINE ID -14 69 3 1 1173 1039 120 17 0 chr13 77145707 77145882 -43138430 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 1 1173 213 39 0 0 chr13 77145884 77145910 -43138402 + (TCCCC)n Simple_repeat Simple_repeat 3 28 0 1 1173 264 246 173 78 chr13 77146076 77146319 -43137993 + RMER17C LTR ERVK 131 396 -14 1 1173 358 298 112 51 chr13 77147135 77147300 -43137012 - RMER17C LTR ERVK -32 378 189 1 1173 333 0 0 0 chr13 77147300 77147337 -43136975 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1173 558 0 0 0 chr13 77147337 77147398 -43136914 + (GA)n Simple_repeat Simple_repeat 2 63 0 1 1173 565 249 26 57 chr13 77147398 77147670 -43136642 - RMER17C LTR ERVK -176 234 1 1 1173 210 37 0 0 chr13 77147776 77147803 -43136509 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 1 1173 3436 187 99 19 chr13 77147951 77147967 -43136345 - Lx5 LINE L1 -667 6383 6368 1 1173 2377 188 16 27 chr13 77147967 77148416 -43135896 - Lx5 LINE L1 0 7050 6607 1 1173 3436 187 99 19 chr13 77148416 77149134 -43135178 - Lx5 LINE L1 -683 6367 5591 1 1173 1751 104 3 11 chr13 77149147 77149430 -43134882 - L1Md_Gf LINE L1 -6179 343 63 1 1173 282 116 0 0 chr13 77149651 77149694 -43134618 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1173 4995 117 54 1 chr13 77149987 77150751 -43133561 - Lx5 LINE L1 -300 5577 4774 1 1173 192 111 0 0 chr13 77150805 77150841 -43133471 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1 1173 24 0 0 0 chr13 77150904 77150928 -43133384 + AT_rich Low_complexity Low_complexity 1 24 0 1 1173 192 295 26 0 chr13 77150936 77151014 -43133298 - MIRb SINE MIR -2 266 187 1 1173 211 313 10 29 chr13 77151900 77152002 -43132310 + CT-rich Low_complexity Low_complexity 3 102 0 1 1173 4841 224 37 48 chr13 77152825 77154908 -43129404 - Lx4B LINE L1 -8 7050 4992 1 1173 810 0 0 0 chr13 77155989 77156079 -43128233 + (TTTC)n Simple_repeat Simple_repeat 3 92 0 1 1173 444 191 105 11 chr13 77156798 77156893 -43127419 - PB1D10 SINE Alu -6 111 8 1 1173 306 243 67 13 chr13 77157285 77157360 -43126952 - ID4_ SINE ID 0 83 5 1 1173 242 219 0 0 chr13 77158773 77158814 -43125498 + ID SINE ID 8 48 -176 1 1173 463 276 152 51 chr13 77158983 77159220 -43125092 - RMER20B LTR ERVK -241 386 126 1 1173 207 200 35 35 chr13 77159231 77159288 -43125024 + (GGGTG)n Simple_repeat Simple_repeat 1 57 0 1 1173 285 328 68 30 chr13 77159430 77159562 -43124750 + B1F SINE Alu 6 142 -7 1 1173 1005 9 0 0 chr13 77159744 77159858 -43124454 + (TTTC)n Simple_repeat Simple_repeat 3 116 0 1 1173 441 226 69 12 chr13 77160595 77160756 -43123556 - B3 SINE B2 -7 188 15 1 1173 563 223 17 35 chr13 77160813 77160929 -43123383 - PB1D9 SINE Alu -1 119 6 1 1173 336 311 58 0 chr13 77160838 77160941 -43123371 - B4A SINE B4 -105 187 79 1 1173 360 0 0 0 chr13 77160985 77161025 -43123287 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1173 567 0 0 0 chr13 77161025 77161087 -43123225 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 1173 228 35 0 0 chr13 77161123 77161152 -43123160 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1173 710 221 38 0 chr13 77161152 77161283 -43123029 - B1_Mur2 SINE Alu -13 136 1 1 1173 434 208 0 151 chr13 77161341 77161460 -43122852 - ID_B1 SINE B4 -1 223 123 1 1173 297 333 30 0 chr13 77161391 77161490 -43122822 - B1F SINE Alu -36 113 12 1 1173 247 151 74 19 chr13 77161467 77161521 -43122791 + B1F SINE Alu 93 149 0 1 1173 5073 105 54 2 chr13 77162748 77163682 -43120630 + L1_Mus3 LINE L1 5656 6654 0 2 1173 786 263 10 40 chr13 77165122 77165320 -43118992 + B3A SINE B2 1 192 -6 2 1173 551 291 83 53 chr13 77166258 77166566 -43117746 - MTD LTR MaLR -48 371 6 2 1173 333 220 94 43 chr13 77166668 77166806 -43117506 - L1M5 LINE L1 -3316 2830 2686 2 1173 2676 111 18 5 chr13 77166963 77167361 -43116951 - L1_Mus4 LINE L1 -22 6614 6212 2 1173 2008 80 0 5 chr13 77167361 77167635 -43116677 + L1_Mus4 LINE L1 5959 6206 -430 2 1173 1161 156 36 9 chr13 77168577 77168797 -43115515 - URR1A DNA MER1_type 0 226 1 2 1173 234 0 0 0 chr13 77171167 77171193 -43113119 + (TG)n Simple_repeat Simple_repeat 2 27 0 2 1173 316 288 130 43 chr13 77171849 77171987 -43112325 + RMER15 LTR ERVL 422 571 -4 2 1173 234 318 0 0 chr13 77173721 77173787 -43110525 + ID4_ SINE ID 1 66 -17 2 1173 1573 84 0 0 chr13 77174373 77174588 -43109724 - L1Md_F2 LINE L1 -8 6574 6360 2 1173 1370 75 0 21 chr13 77175082 77175272 -43109040 - B2_Mm2 SINE B2 -8 187 2 2 1173 1763 148 34 12 chr13 77175435 77175756 -43108556 - Lx4A LINE L1 -1 7057 6730 2 1173 1113 76 0 0 chr13 77175791 77175936 -43108376 - B1_Mus1 SINE Alu 0 148 4 2 1173 250 300 88 122 chr13 77176033 77176092 -43108220 + RMER6C LTR ERVK 1 128 -592 2 1173 509 140 0 138 chr13 77176092 77176208 -43108104 + MT2B LTR ERVL 187 286 -315 2 1173 250 300 88 122 chr13 77176208 77176238 -43108074 + RMER6C LTR ERVK 129 198 -522 2 1173 1792 172 52 52 chr13 77176210 77176597 -43107715 + RMER6C LTR ERVK 304 690 0 2 1173 1582 88 20 93 chr13 77179253 77179335 -43104977 + L1_Mur1 LINE L1 3854 3915 -1971 2 1173 1244 14 7 0 chr13 77179335 77179480 -43104832 - B1_Mus2 SINE Alu -1 146 1 2 1173 1582 88 20 93 chr13 77179480 77179699 -43104613 + L1_Mur1 LINE L1 3916 4133 -1753 2 1173 7922 92 115 14 chr13 77180575 77181264 -43103048 + Lx2 LINE L1 5642 6323 -674 2 1173 3258 30 25 0 chr13 77181264 77181665 -43102647 - IAPLTR2a LTR ERVK 0 411 1 2 1173 7922 92 115 14 chr13 77181665 77182206 -43102106 + Lx2 LINE L1 6324 6997 0 2 1173 42 20 0 0 chr13 77182514 77182563 -43101749 + AT_rich Low_complexity Low_complexity 1 49 0 2 1173 23 0 0 0 chr13 77185653 77185676 -43098636 + AT_rich Low_complexity Low_complexity 1 23 0 2 1173 23 68 0 0 chr13 77186118 77186162 -43098150 + AT_rich Low_complexity Low_complexity 1 44 0 2 1173 567 0 0 0 chr13 77187041 77187104 -43097208 + (CA)n Simple_repeat Simple_repeat 1 63 0 2 1173 21 0 0 0 chr13 77190021 77190042 -43094270 + AT_rich Low_complexity Low_complexity 1 21 0 2 1173 306 0 0 0 chr13 77190043 77190077 -43094235 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1173 356 197 0 27 chr13 77190128 77190201 -43094111 - B3A SINE B2 -127 71 1 2 1173 1950 207 158 80 chr13 77190887 77191513 -43092799 + RMER1B Other Other 391 1065 -1 2 1173 368 283 212 25 chr13 77191565 77191973 -43092339 + L1M2 LINE L1 4737 5218 -922 2 1173 23 33 0 0 chr13 77192155 77192185 -43092127 + AT_rich Low_complexity Low_complexity 1 30 0 2 1173 29025 128 21 10 chr13 77193049 77196272 -43088040 + L1_Mus3 LINE L1 511 3705 -2178 2 1173 3963 80 35 2 chr13 77196272 77196820 -43087492 + L1_Mus2 LINE L1 6001 6566 0 2 1173 29025 114 15 11 chr13 77196820 77198886 -43085426 + L1_Mus3 LINE L1 3706 5823 -815 2 1173 1065 80 0 0 chr13 77198886 77199023 -43085289 - B1_Mm SINE Alu -10 137 1 2 1173 4880 137 147 12 chr13 77199023 77199726 -43084586 + L1_Mus3 LINE L1 5824 6628 -10 2 1173 1937 173 19 28 chr13 77200055 77200417 -43083895 + ORR1B1 LTR MaLR 33 391 -3 2 1173 549 90 0 0 chr13 77200518 77200607 -43083705 + (TC)n Simple_repeat Simple_repeat 2 90 0 2 1173 306 0 0 0 chr13 77200607 77200641 -43083671 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1173 2782 97 5 5 chr13 77200746 77201142 -43083170 + MTA_Mm LTR MaLR 1 396 0 2 1174 2747 49 11 14 chr13 77201794 77202149 -43082163 + L1Md_F3 LINE L1 6229 6582 -2 2 1174 1546 247 95 121 chr13 77203123 77203546 -43080766 + MYSERV16_I-int LTR ERVK 544 961 -1365 2 1174 849 20 0 0 chr13 77203546 77203645 -43080667 + (TC)n Simple_repeat Simple_repeat 1 99 0 2 1174 1546 247 95 121 chr13 77203645 77204087 -43080225 + MYSERV16_I-int LTR ERVK 962 1386 -940 2 1174 1437 137 76 12 chr13 77204096 77204347 -43079965 - RLTR11B LTR ERVK -184 269 3 2 1174 361 281 53 0 chr13 77204350 77204464 -43079848 + Lx9 LINE L1 6930 7049 -595 2 1174 189 0 0 0 chr13 77204608 77204629 -43079683 + (TC)n Simple_repeat Simple_repeat 2 22 0 2 1174 238 328 0 0 chr13 77204633 77204691 -43079621 + Lx8 LINE L1 7163 7220 -253 2 1174 3515 128 98 0 chr13 77204701 77205303 -43079009 - L1_Mur2 LINE L1 -911 4966 4306 2 1174 188 189 38 0 chr13 77205422 77205475 -43078837 + (CATATA)n Simple_repeat Simple_repeat 6 60 0 2 1174 38 39 0 0 chr13 77205571 77205623 -43078689 + AT_rich Low_complexity Low_complexity 1 52 0 2 1174 261 0 0 0 chr13 77206643 77206672 -43077640 + (TA)n Simple_repeat Simple_repeat 1 29 0 2 1174 526 315 14 7 chr13 77206773 77206917 -43077395 - RSINE1 SINE B4 -7 158 14 2 1174 27 23 0 22 chr13 77207180 77207205 -43077107 + AT_rich Low_complexity Low_complexity 1 25 0 2 1174 844 169 90 0 chr13 77207205 77207371 -43076941 - B2_Mm2 SINE B2 -14 181 1 2 1174 27 23 0 22 chr13 77207371 77207390 -43076922 + AT_rich Low_complexity Low_complexity 1 19 0 2 1174 2634 234 75 101 chr13 77207706 77208609 -43075703 + Lx6 LINE L1 6358 7454 -6 2 1174 25 24 0 23 chr13 77209664 77209675 -43074637 + AT_rich Low_complexity Low_complexity 1 11 0 2 1174 758 229 57 52 chr13 77209675 77209887 -43074425 - B3 SINE B2 -1 215 3 2 1174 25 24 0 23 chr13 77209887 77209918 -43074394 + AT_rich Low_complexity Low_complexity 1 31 0 2 1174 1285 67 66 16 chr13 77210096 77210279 -43074033 - B2_Mm2 SINE B2 -2 193 2 2 1174 538 265 25 70 chr13 77210394 77210552 -43073760 - RSINE1 SINE B4 -8 157 7 2 1174 336 97 81 0 chr13 77210600 77210662 -43073650 + Lx4A LINE L1 5985 6051 -1007 2 1174 264 222 99 33 chr13 77210643 77210764 -43073548 + Lx4A LINE L1 6930 7058 0 2 1174 34 0 0 0 chr13 77211793 77211827 -43072485 + AT_rich Low_complexity Low_complexity 1 34 0 2 1174 479 321 6 19 chr13 77212255 77212417 -43071895 + RSINE1 SINE B4 2 161 -4 2 1174 495 299 60 20 chr13 77212751 77212952 -43071360 + RMER15 LTR ERVL 362 570 -5 2 1174 210 307 150 50 chr13 77212954 77213074 -43071238 - B1F SINE Alu -17 132 1 2 1174 343 320 117 0 chr13 77212972 77213075 -43071237 - ID_B1 SINE B4 -29 195 81 2 1174 340 314 92 80 chr13 77213503 77213904 -43070408 + L1MEg LINE L1 493 898 -5186 2 1174 10952 110 18 3 chr13 77214088 77215875 -43068437 + L1_Mus3 LINE L1 1135 2949 -2934 2 1174 6297 92 10 32 chr13 77215848 77216256 -43068056 + MusHAL1 LINE L1 701 1104 -1608 2 1174 3391 117 68 38 chr13 77216256 77216840 -43067472 - L1_Mus4 LINE L1 0 6636 6035 2 1174 6297 92 10 32 chr13 77216840 77217420 -43066892 + MusHAL1 LINE L1 1105 1667 -1045 2 1174 21 36 0 0 chr13 77217529 77217557 -43066755 + AT_rich Low_complexity Low_complexity 1 28 0 2 1174 5556 40 6 3 chr13 77218954 77219653 -43064659 - L1Md_F2 LINE L1 0 6582 5882 2 1174 9928 106 6 11 chr13 77219897 77222221 -43062091 + L1_Mus3 LINE L1 4318 6631 -7 2 1174 363 277 125 21 chr13 77222496 77222640 -43061672 - MER2 DNA MER2_type -186 159 1 2 1174 24 0 0 0 chr13 77222873 77222897 -43061415 + AT_rich Low_complexity Low_complexity 1 24 0 2 1174 607 289 88 31 chr13 77223054 77223247 -43061065 + B4 SINE B4 89 292 0 2 1174 4386 82 19 2 chr13 77223918 77224514 -43059798 - L1_Mus2 LINE L1 0 6566 5961 2 1174 18123 121 50 9 chr13 77224533 77225666 -43058646 - Lx3B LINE L1 -930 6043 4836 2 1174 225 0 0 0 chr13 77225666 77225691 -43058621 + (TTG)n Simple_repeat Simple_repeat 3 27 0 2 1174 18123 128 68 8 chr13 77225691 77226949 -43057363 - Lx3B LINE L1 -1051 4835 3487 2 1174 693 66 0 0 chr13 77226949 77227040 -43057272 + (TC)n Simple_repeat Simple_repeat 2 92 0 2 1174 18123 128 68 8 chr13 77227040 77228015 -43056297 - Lx3B LINE L1 -2400 3486 2486 2 1174 637 204 5 112 chr13 77228014 77228202 -43056110 - Lx3B LINE L1 -3521 2365 2198 2 1174 735 293 6 40 chr13 77228376 77228550 -43055762 - B4A SINE B4 -5 287 120 2 1174 741 239 0 0 chr13 77228583 77228725 -43055587 - B1_Mus1 SINE Alu -5 143 2 2 1174 454 304 17 75 chr13 77228725 77228806 -43055506 - B4A SINE B4 -205 87 17 2 1174 34 0 0 0 chr13 77229730 77229764 -43054548 + AT_rich Low_complexity Low_complexity 1 34 0 2 1174 21 0 0 0 chr13 77230365 77230386 -43053926 + AT_rich Low_complexity Low_complexity 1 21 0 2 1174 576 337 35 51 chr13 77230869 77231066 -43053246 + B4 SINE B4 24 217 -75 2 1174 6421 127 25 1 chr13 77231872 77232851 -43051461 - Lx LINE L1 -2 6652 5651 2 1174 15359 89 91 52 chr13 77232848 77233321 -43050991 - L1Md_F2 LINE L1 -655 5983 5490 2 1174 4065 84 2 7 chr13 77233321 77233887 -43050425 + L1Md_F2 LINE L1 6010 6572 -10 2 1174 15359 160 29 142 chr13 77233887 77234281 -43050031 - L1_Mus3 LINE L1 -394 5489 5288 2 1174 2286 73 0 0 chr13 77234281 77234581 -43049731 - L1_Mus1 LINE L1 -1 6566 6267 2 1174 15499 160 29 141 chr13 77234581 77237889 -43046423 - L1_Mus3 LINE L1 -581 5305 2275 2 1174 2791 63 0 3 chr13 77238028 77238392 -43045920 - L1Md_F2 LINE L1 -570 5313 4951 2 1174 2211 45 4 0 chr13 77238388 77238654 -43045658 + L1Md_F2 LINE L1 5320 5586 -297 2 1174 8298 28 14 1 chr13 77238654 77239635 -43044677 + L1Md_F2 LINE L1 5587 6580 -2 2 1174 2503 196 216 26 chr13 77241013 77241669 -43042643 + Lx9 LINE L1 6367 7152 -492 2 1174 3323 45 0 0 chr13 77241669 77242065 -43042247 + MTA_Mm LTR MaLR 1 396 0 2 1174 2503 198 121 15 chr13 77242065 77242204 -43042108 + Lx9 LINE L1 7153 7302 -342 2 1174 195 129 0 0 chr13 77242291 77242322 -43041990 + (TA)n Simple_repeat Simple_repeat 1 31 0 2 1174 207 0 0 0 chr13 77243322 77243345 -43040967 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1174 225 0 0 0 chr13 77244800 77244825 -43039487 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1174 764 259 77 19 chr13 77245821 77246030 -43038282 + B4 SINE B4 3 223 -69 2 1174 572 40 13 0 chr13 77246500 77246575 -43037737 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 1174 388 294 151 39 chr13 77246584 77246842 -43037470 + Lx8 LINE L1 7095 7381 -92 2 1174 434 316 30 0 chr13 77247480 77247613 -43036699 - ID_B1 SINE B4 -3 221 85 2 1174 246 128 0 0 chr13 77247625 77247664 -43036648 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1174 1665 235 115 4 chr13 77247714 77248184 -43036128 - Lx9 LINE L1 -33 7611 7090 2 1174 231 351 108 21 chr13 77248315 77248561 -43035751 + MIR SINE MIR 1 254 -8 2 1174 465 247 53 9 chr13 77248782 77249104 -43035208 + (TG)n Simple_repeat Simple_repeat 1 336 0 2 1174 412 259 137 39 chr13 77249193 77249346 -43034966 - B4A SINE B4 -120 172 5 2 1174 260 297 54 21 chr13 77250236 77250329 -43033983 - PB1D10 SINE Alu -1 116 21 3 1174 291 291 143 18 chr13 77250462 77250574 -43033738 - MLT1L LTR MaLR -318 292 167 3 1174 217 370 37 0 chr13 77250706 77250787 -43033525 - L2b LINE L2 -5 3370 3287 3 1174 240 369 64 29 chr13 77250850 77251023 -43033289 - L2b LINE L2 -755 2664 2486 3 1174 564 281 95 38 chr13 77251538 77251749 -43032563 + MER2 DNA MER2_type 91 313 -32 3 1174 182 128 0 25 chr13 77252013 77252053 -43032259 + A-rich Low_complexity Low_complexity 3 41 0 3 1174 318 311 92 49 chr13 77252426 77252568 -43031744 + B1F2 SINE Alu 2 149 0 3 1174 313 292 120 36 chr13 77252784 77252951 -43031361 + L1ME1 LINE L1 204 384 -6039 3 1174 4863 180 73 49 chr13 77253031 77253453 -43030859 - ORR1A2-int LTR MaLR -641 1151 709 3 1174 1618 31 5 0 chr13 77253453 77253644 -43030668 - B2_Mm1t SINE B2 0 193 2 3 1174 4863 180 73 49 chr13 77253644 77254345 -43029967 - ORR1A2-int LTR MaLR -1084 708 1 3 1174 2309 101 35 0 chr13 77254345 77254661 -43029651 - ORR1A2 LTR MaLR 0 327 1 3 1174 13586 149 57 10 chr13 77254972 77255835 -43028477 + L1_Mur1 LINE L1 1889 2793 -3093 3 1174 228 67 0 0 chr13 77255835 77255865 -43028447 + (CAA)n Simple_repeat Simple_repeat 1 30 0 3 1174 13586 149 57 10 chr13 77255865 77256548 -43027764 + L1_Mur1 LINE L1 2794 3486 -2400 3 1174 207 0 0 0 chr13 77256548 77256571 -43027741 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1174 13586 149 57 10 chr13 77256571 77257672 -43026640 + L1_Mur1 LINE L1 3487 4660 -1226 3 1174 1963 66 0 8 chr13 77257714 77257974 -43026338 - L1_Mus2 LINE L1 0 6566 6309 3 1174 330 248 56 19 chr13 77258705 77258812 -43025500 + L1ME1 LINE L1 4534 4644 -2297 3 1174 506 315 39 31 chr13 77258821 77259029 -43025283 + B3A SINE B2 8 205 -11 3 1174 418 304 106 41 chr13 77259173 77259266 -43025046 + L1ME1 LINE L1 5175 5263 -1678 3 1174 302 274 8 89 chr13 77259266 77259390 -43024922 + PB1D10 SINE Alu 2 115 -2 3 1174 418 304 106 41 chr13 77259390 77259663 -43024649 + L1ME1 LINE L1 5264 5565 -1376 3 1174 5747 200 74 48 chr13 77259822 77261310 -43023002 + RMER3D-int LTR ERVK 1168 2711 -131 3 1174 420 37 0 0 chr13 77261310 77261364 -43022948 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 3 1174 1144 43 7 0 chr13 77261366 77261507 -43022805 - B1_Mus2 SINE Alu -4 143 2 3 1174 5747 200 74 48 chr13 77261507 77261647 -43022665 + RMER3D-int LTR ERVK 2712 2841 -1 3 1174 2925 116 108 51 chr13 77261648 77262174 -43022138 + RLTR31B_Mm LTR ERVK 1 556 -1 3 1174 353 344 106 8 chr13 77262175 77262711 -43021601 + L1ME1 LINE L1 6360 6948 -26 3 1174 981 287 60 19 chr13 77262824 77263090 -43021222 + B4A SINE B4 8 284 -8 3 1174 4854 113 26 1 chr13 77263356 77264089 -43020223 + Lx2 LINE L1 6247 6997 0 3 1174 21 36 0 0 chr13 77264342 77264370 -43019942 + AT_rich Low_complexity Low_complexity 1 28 0 3 1174 23 0 0 0 chr13 77264855 77264878 -43019434 + AT_rich Low_complexity Low_complexity 1 23 0 3 1174 25 31 0 0 chr13 77265428 77265460 -43018852 + AT_rich Low_complexity Low_complexity 1 32 0 3 1174 28 48 0 0 chr13 77266331 77266373 -43017939 + AT_rich Low_complexity Low_complexity 1 42 0 3 1174 561 295 93 42 chr13 77266979 77267195 -43017117 + MER2 DNA MER2_type 6 232 -113 3 1174 315 0 0 0 chr13 77267263 77267298 -43017014 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1174 396 0 0 0 chr13 77267298 77267341 -43016971 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1174 21 0 0 0 chr13 77267989 77268010 -43016302 + AT_rich Low_complexity Low_complexity 1 21 0 3 1174 848 147 0 7 chr13 77268946 77269097 -43015215 + (TA)n Simple_repeat Simple_repeat 1 150 0 3 1174 468 0 0 0 chr13 77270036 77270088 -43014224 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1174 706 165 44 29 chr13 77270833 77270970 -43013342 + B1_Mur1 SINE Alu 4 142 -7 3 1174 248 192 37 37 chr13 77270973 77271054 -43013258 + A-rich Low_complexity Low_complexity 2 82 0 3 1174 23 0 0 0 chr13 77271515 77271538 -43012774 + AT_rich Low_complexity Low_complexity 1 23 0 3 1174 359 159 72 0 chr13 77271983 77272052 -43012260 + RSINE1 SINE B4 15 88 -77 3 1174 263 305 0 12 chr13 77272153 77272236 -43012076 + ID4_ SINE ID 1 82 -1 3 1174 31 26 0 0 chr13 77273142 77273180 -43011132 + AT_rich Low_complexity Low_complexity 1 38 0 3 1174 201 162 0 0 chr13 77275342 77275379 -43008933 + T-rich Low_complexity Low_complexity 1 37 0 3 1174 21 0 0 0 chr13 77275763 77275784 -43008528 + AT_rich Low_complexity Low_complexity 1 21 0 3 1174 765 199 176 0 chr13 77275784 77275960 -43008352 + B3 SINE B2 2 208 -8 3 1174 9882 85 27 14 chr13 77276542 77277935 -43006377 - Lx3_Mus LINE L1 -12 6997 5587 3 1174 2024 63 4 21 chr13 77277950 77278241 -43006071 - IAPEY3_LTR LTR ERVK -47 364 1 3 1174 7718 65 22 7 chr13 77278241 77279282 -43005030 - Lx3_Mus LINE L1 -317 5569 4513 3 1174 262 288 0 0 chr13 77279346 77279426 -43004886 - L1_Mur1 LINE L1 -6672 310 231 3 1174 657 284 12 12 chr13 77279651 77279815 -43004497 + B3 SINE B2 40 203 -13 3 1174 24 67 0 0 chr13 77280875 77280920 -43003392 + AT_rich Low_complexity Low_complexity 1 45 0 3 1174 496 154 9 46 chr13 77281061 77281150 -43003162 + Lx2 LINE L1 6885 6970 -27 3 1174 330 67 0 0 chr13 77281150 77281195 -43003117 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 3 1174 496 154 9 46 chr13 77281195 77281214 -43003098 + Lx2 LINE L1 6971 6989 -8 3 1174 240 191 0 0 chr13 77282087 77282134 -43002178 + T-rich Low_complexity Low_complexity 4 50 0 3 1174 531 349 64 8 chr13 77282238 77282489 -43001823 - B4A SINE B4 0 292 28 3 1174 36 23 0 0 chr13 77282627 77282670 -43001642 + AT_rich Low_complexity Low_complexity 1 43 0 3 1174 298 338 94 58 chr13 77282702 77282925 -43001387 - Charlie1a DNA MER1_type -466 989 759 3 1174 362 250 8 114 chr13 77282938 77283069 -43001243 - Charlie1a DNA MER1_type -790 665 549 3 1174 270 280 38 46 chr13 77283057 77283188 -43001124 - Charlie1a DNA MER1_type -1107 348 219 3 1174 356 291 178 68 chr13 77283212 77283448 -43000864 + MLT1E2 LTR MaLR 43 307 -198 3 1174 1656 223 17 28 chr13 77283448 77283914 -43000398 - Lx9 LINE L1 -1682 5962 5466 3 1174 267 232 0 0 chr13 77283928 77284010 -43000302 + (TG)n Simple_repeat Simple_repeat 1 82 0 3 1174 619 185 18 0 chr13 77284014 77284140 -43000172 - Lx9 LINE L1 -384 5496 5343 3 1174 277 200 0 34 chr13 77284149 77284166 -43000146 + polypyrimidine Low_complexity Low_complexity 72 86 0 3 1174 1061 131 0 6 chr13 77284166 77284343 -42999969 + (TTC)n Simple_repeat Simple_repeat 3 178 0 3 1174 277 200 0 34 chr13 77284343 77284413 -42999899 + CT-rich Low_complexity Low_complexity 2 71 0 3 1174 4254 204 57 54 chr13 77284468 77285713 -42998599 - Lx9 LINE L1 -545 5302 4054 3 1174 389 95 0 16 chr13 77285804 77285868 -42998444 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 3 1174 200 182 0 0 chr13 77286151 77286184 -42998128 + CT-rich Low_complexity Low_complexity 2 34 0 3 1174 224 346 25 13 chr13 77286227 77286306 -42998006 + ID4 SINE ID 3 82 -1 3 1174 25 51 0 0 chr13 77286317 77286356 -42997956 + AT_rich Low_complexity Low_complexity 1 39 0 3 1174 333 0 0 0 chr13 77286473 77286510 -42997802 + (TC)n Simple_repeat Simple_repeat 2 38 0 3 1174 471 18 0 0 chr13 77286510 77286565 -42997747 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1174 251 54 27 0 chr13 77287185 77287222 -42997090 + (TATG)n Simple_repeat Simple_repeat 3 40 0 3 1174 1045 138 0 6 chr13 77287327 77287494 -42996818 - B2_Mm2 SINE B2 -10 185 20 3 1174 245 348 117 28 chr13 77287706 77287851 -42996461 - ID_B1 SINE B4 -11 213 56 3 1174 1260 72 66 0 chr13 77288022 77288203 -42996109 - B2_Mm2 SINE B2 0 195 3 3 1174 612 0 0 0 chr13 77288209 77288277 -42996035 + (TTTA)n Simple_repeat Simple_repeat 2 69 0 3 1174 495 274 170 41 chr13 77288282 77288786 -42995526 - L1M4c LINE L1 -5120 2214 1655 3 1174 272 301 43 11 chr13 77288799 77288893 -42995419 - PB1D10 SINE Alu -23 97 1 3 1174 21 0 0 0 chr13 77288914 77288935 -42995377 + AT_rich Low_complexity Low_complexity 1 21 0 3 1174 550 267 0 36 chr13 77288936 77289076 -42995236 - B1_Mur2 SINE Alu -10 139 5 3 1174 230 171 0 0 chr13 77289077 77289118 -42995194 - L1M4c LINE L1 -5404 1698 1658 3 1174 325 173 53 0 chr13 77289157 77289232 -42995080 - L1M4c LINE L1 -5925 1409 1331 3 1174 23 0 0 0 chr13 77289236 77289259 -42995053 + AT_rich Low_complexity Low_complexity 1 23 0 3 1174 314 171 14 0 chr13 77289327 77289397 -42994915 + (TA)n Simple_repeat Simple_repeat 1 71 0 3 1174 24 85 0 0 chr13 77289955 77290014 -42994298 + AT_rich Low_complexity Low_complexity 1 59 0 3 1174 852 168 42 0 chr13 77290102 77290245 -42994067 + B1_Mur3 SINE Alu 1 149 0 3 1174 833 141 21 0 chr13 77290902 77291044 -42993268 + B1_Mur4 SINE Alu 6 150 0 3 1174 188 34 0 33 chr13 77291053 77291083 -42993229 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 3 1174 320 238 0 0 chr13 77291146 77291209 -42993103 + ID4_ SINE ID 5 67 -16 3 1174 24 67 0 0 chr13 77293211 77293256 -42991056 + AT_rich Low_complexity Low_complexity 1 45 0 3 1174 22 88 0 0 chr13 77293984 77294041 -42990271 + AT_rich Low_complexity Low_complexity 1 57 0 3 1174 1228 113 0 21 chr13 77294927 77295116 -42989196 + B2_Mm2 SINE B2 2 186 -9 3 1174 208 241 161 65 chr13 77295201 77295294 -42989018 + MIR SINE MIR 111 212 -50 3 1174 585 267 23 80 chr13 77295344 77295490 -42988822 - B4A SINE B4 0 292 155 3 1174 1185 237 174 3 chr13 77295490 77295846 -42988466 - MTD LTR MaLR -2 417 1 3 1174 585 267 23 80 chr13 77295846 77295874 -42988438 - B4A SINE B4 -138 154 129 3 1174 229 344 0 0 chr13 77295891 77295955 -42988357 - B4A SINE B4 -228 64 1 3 1174 286 330 120 0 chr13 77295972 77296072 -42988240 - PB1D10 SINE Alu -5 112 1 3 1174 21 0 0 0 chr13 77297334 77297355 -42986957 + AT_rich Low_complexity Low_complexity 1 21 0 3 1174 481 294 182 21 chr13 77297478 77297745 -42986567 + MTEb LTR MaLR 6 321 -58 3 1174 23 0 0 0 chr13 77298121 77298144 -42986168 + AT_rich Low_complexity Low_complexity 1 23 0 3 1174 2178 94 19 0 chr13 77298180 77298499 -42985813 + IAPEY2_LTR LTR ERVK 33 357 0 3 1174 518 266 127 129 chr13 77298658 77299020 -42985292 + BLACKJACK DNA AcHobo 978 1338 -1606 3 1174 1227 205 138 49 chr13 77299020 77299183 -42985129 + ORR1C2 LTR MaLR 1 170 -214 3 1174 651 60 0 0 chr13 77299183 77299267 -42985045 + (TC)n Simple_repeat Simple_repeat 1 84 0 3 1174 267 93 0 0 chr13 77299274 77299317 -42984995 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 3 1174 1227 205 138 49 chr13 77299317 77299494 -42984818 + ORR1C2 LTR MaLR 171 380 -4 3 1174 518 266 127 129 chr13 77299494 77299618 -42984694 + BLACKJACK DNA AcHobo 1339 1463 -1481 3 1174 278 208 0 0 chr13 77299718 77299771 -42984541 + RMER10B LTR ERVL 1 53 -345 3 1174 352 104 0 0 chr13 77299769 77299817 -42984495 + RMER10B LTR ERVL 351 398 0 3 1174 337 312 77 66 chr13 77299832 77300014 -42984298 - RLTR23 LTR ERV1 0 430 247 3 1174 475 277 0 10 chr13 77300860 77300962 -42983350 - B3 SINE B2 -114 102 2 3 1174 786 261 51 9 chr13 77300999 77301287 -42983025 + L1MA8 LINE L1 5724 6022 -269 3 1174 457 320 75 25 chr13 77302898 77303097 -42981215 + ID_B1 SINE B4 3 211 -13 3 1174 253 269 24 60 chr13 77303318 77303401 -42980911 - ID4_ SINE ID -2 81 2 4 1174 1745 75 43 23 chr13 77304098 77304248 -42980064 - L1_Mur1 LINE L1 -431 5455 5311 4 1174 3123 73 2 0 chr13 77304248 77304647 -42979665 - MTB LTR MaLR 0 400 1 4 1174 1745 114 64 31 chr13 77304647 77304787 -42979525 - L1_Mur1 LINE L1 -576 5310 5110 4 1174 2585 276 54 43 chr13 77305526 77306390 -42977922 - Lx9 LINE L1 -453 7191 6318 4 1174 848 250 75 4 chr13 77306412 77306653 -42977659 + Lx9 LINE L1 7226 7483 -161 4 1174 477 0 0 0 chr13 77306661 77306714 -42977598 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1174 24 0 0 0 chr13 77306792 77306816 -42977496 + AT_rich Low_complexity Low_complexity 1 24 0 4 1174 1679 175 43 41 chr13 77306886 77306933 -42977379 + ORR1B1 LTR MaLR 41 79 -315 4 1174 1701 178 62 0 chr13 77306933 77307271 -42977041 + RLTR15 LTR ERVK 1 359 0 4 1174 1679 175 43 41 chr13 77307271 77307568 -42976744 + ORR1B1 LTR MaLR 80 386 -8 4 1174 578 99 11 0 chr13 77307734 77307825 -42976487 + (TCCCC)n Simple_repeat Simple_repeat 1 92 0 4 1174 465 277 91 13 chr13 77307827 77307991 -42976321 + MTEb LTR MaLR 163 376 -3 4 1174 206 105 26 0 chr13 77309183 77309221 -42975091 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 4 1174 1151 55 0 7 chr13 77309322 77309469 -42974843 + B1_Mus2 SINE Alu 2 147 0 4 1174 3616 151 83 26 chr13 77309506 77309794 -42974518 - RLTR22_Mur LTR ERVK -1041 807 517 4 1174 4123 132 49 38 chr13 77309794 77310247 -42974065 + RMER17D2 LTR ERVK 1 471 -338 4 1174 835 78 21 14 chr13 77310247 77310391 -42973921 + (TC)n Simple_repeat Simple_repeat 2 146 0 4 1174 4123 132 49 38 chr13 77310391 77310737 -42973575 + RMER17D2 LTR ERVK 472 809 0 4 1174 3616 151 83 26 chr13 77310737 77311078 -42973234 - RLTR22_Mur LTR ERVK -1332 516 162 4 1174 534 43 0 0 chr13 77311078 77311147 -42973165 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1174 261 0 0 0 chr13 77311147 77311175 -42973137 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 1174 180 0 0 0 chr13 77311176 77311196 -42973116 + (GA)n Simple_repeat Simple_repeat 2 21 0 4 1174 3616 151 83 26 chr13 77311196 77311324 -42972988 - RLTR22_Mur LTR ERVK -1687 161 10 4 1174 25 0 0 0 chr13 77312052 77312077 -42972235 + AT_rich Low_complexity Low_complexity 1 25 0 4 1174 5620 94 115 8 chr13 77312191 77313093 -42971219 - Lx3_Mus LINE L1 -8 7001 6003 4 1174 1436 206 61 94 chr13 77313163 77313672 -42970640 - Lx7 LINE L1 -16 7680 7189 4 1174 573 229 53 15 chr13 77314725 77314858 -42969454 - B1_Mus2 SINE Alu -9 138 1 4 1174 288 225 109 0 chr13 77315016 77315117 -42969195 + PB1D9 SINE Alu 17 129 -20 4 1174 294 29 0 0 chr13 77315230 77315265 -42969047 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1174 29 47 0 0 chr13 77315293 77315336 -42968976 + AT_rich Low_complexity Low_complexity 1 43 0 4 1174 26 30 0 0 chr13 77317681 77317714 -42966598 + AT_rich Low_complexity Low_complexity 1 33 0 4 1174 888 283 139 35 chr13 77317808 77318203 -42966109 - Lx8 LINE L1 -592 6881 6446 4 1174 562 301 118 32 chr13 77318213 77318433 -42965879 + Lx8 LINE L1 7040 7278 -195 4 1174 314 192 101 13 chr13 77318380 77318459 -42965853 + RMER1C Other Other 1108 1193 -149 4 1174 343 68 34 0 chr13 77318459 77318518 -42965794 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1174 224 120 0 74 chr13 77318582 77318663 -42965649 + A-rich Low_complexity Low_complexity 6 80 0 4 1174 640 283 40 80 chr13 77319232 77319332 -42964980 + B3A SINE B2 7 108 -90 4 1174 1981 111 65 0 chr13 77319332 77319639 -42964673 - ORR1A2 LTR MaLR 0 327 1 4 1174 640 283 40 80 chr13 77319639 77319738 -42964574 + B3A SINE B2 109 198 0 4 1174 204 229 14 14 chr13 77320548 77320619 -42963693 + (TATTG)n Simple_repeat Simple_repeat 1 71 0 4 1174 237 65 0 0 chr13 77320951 77320982 -42963330 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1174 1039 45 0 36 chr13 77320983 77321121 -42963191 - B1_Mm SINE Alu -12 135 3 4 1174 21 0 0 0 chr13 77322283 77322304 -42962008 + AT_rich Low_complexity Low_complexity 1 21 0 4 1174 207 69 0 0 chr13 77323491 77323520 -42960792 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 4 1174 3910 118 18 10 chr13 77323935 77324562 -42959750 - L1_Mus3 LINE L1 0 6638 6007 4 1174 4323 90 27 0 chr13 77324557 77325157 -42959155 - L1_Mus2 LINE L1 0 6566 5951 4 1174 24141 126 15 16 chr13 77325158 77327537 -42956775 - L1VL1 LINE L1 -638 5245 2889 4 1174 249 33 0 0 chr13 77327537 77327567 -42956745 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 4 1174 24141 131 9 18 chr13 77327567 77330244 -42954068 - L1VL1 LINE L1 -2995 2888 217 4 1174 26 0 0 0 chr13 77330710 77330736 -42953576 + AT_rich Low_complexity Low_complexity 1 26 0 4 1175 40 49 0 0 chr13 77333054 77333115 -42951197 + AT_rich Low_complexity Low_complexity 1 61 0 4 1175 31 76 0 0 chr13 77333262 77333328 -42950984 + AT_rich Low_complexity Low_complexity 1 66 0 4 1175 252 327 167 19 chr13 77334470 77334632 -42949680 - MIRb SINE MIR -64 204 19 4 1175 684 168 0 20 chr13 77334993 77335145 -42949167 + CT-rich Low_complexity Low_complexity 1 149 0 4 1175 1145 41 7 14 chr13 77335403 77335550 -42948762 + B1_Mm SINE Alu 2 147 0 4 1175 357 236 30 11 chr13 77335710 77335829 -42948483 - ID4 SINE ID -12 140 17 4 1175 3014 155 36 11 chr13 77336010 77336563 -42947749 - Lx4A LINE L1 0 7058 6492 4 1175 28 0 0 0 chr13 77336732 77336760 -42947552 + AT_rich Low_complexity Low_complexity 1 28 0 4 1175 205 338 0 15 chr13 77337062 77337128 -42947184 + MIR3 SINE MIR 142 206 -2 4 1175 14074 99 23 7 chr13 77338450 77339852 -42944460 - L1_Mus3 LINE L1 0 6638 5236 4 1175 258 105 0 0 chr13 77339852 77339890 -42944422 + (TATG)n Simple_repeat Simple_repeat 2 39 0 4 1175 14074 129 20 3 chr13 77339890 77341518 -42942794 - L1_Mus3 LINE L1 -648 5235 3590 4 1175 1436 140 0 143 chr13 77341513 77341855 -42942457 - L1_Mus3 LINE L1 -2807 3076 2784 4 1175 1836 107 15 19 chr13 77341855 77342180 -42942132 - MusHAL1 LINE L1 -1824 888 565 4 1175 342 0 0 0 chr13 77342239 77342277 -42942035 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 4 1175 378 249 229 6 chr13 77344176 77344342 -42939970 - L1_Rod LINE L1 -61 5786 5584 4 1175 283 260 64 13 chr13 77344388 77344466 -42939846 - ID4_ SINE ID -1 82 1 4 1175 21 57 0 0 chr13 77345190 77345225 -42939087 + AT_rich Low_complexity Low_complexity 1 35 0 4 1175 646 291 143 15 chr13 77345444 77345716 -42938596 - MLT1A0 LTR MaLR -58 307 1 4 1175 501 288 48 53 chr13 77347226 77347413 -42936899 - ORR1D2 LTR MaLR -184 186 1 4 1175 22 0 0 0 chr13 77347461 77347483 -42936829 + AT_rich Low_complexity Low_complexity 1 22 0 4 1175 882 207 62 55 chr13 77347590 77347881 -42936431 - Lx7 LINE L1 0 7696 7404 4 1175 281 312 43 0 chr13 77349592 77349685 -42934627 - B1F1 SINE Alu -52 97 1 4 1175 276 297 27 13 chr13 77349876 77349951 -42934361 - ID4_ SINE ID -2 81 6 4 1175 1138 55 0 27 chr13 77349975 77349987 -42934325 - B1_Mus1 SINE Alu -2 146 137 4 1175 357 24 0 0 chr13 77349987 77350029 -42934283 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 1175 1138 55 0 27 chr13 77350029 77350165 -42934147 - B1_Mus1 SINE Alu -12 136 2 4 1175 708 327 72 19 chr13 77350646 77350911 -42933401 + B4A SINE B4 1 279 -13 4 1175 500 309 27 22 chr13 77351470 77351655 -42932657 - B4A SINE B4 -48 244 59 4 1175 204 125 0 0 chr13 77351804 77351836 -42932476 + (TCC)n Simple_repeat Simple_repeat 3 34 0 4 1175 236 321 0 12 chr13 77351958 77352040 -42932272 - ID4_ SINE ID 0 83 3 4 1175 353 232 0 0 chr13 77352252 77352321 -42931991 + ID2 SINE ID 15 83 0 4 1175 283 233 92 11 chr13 77352254 77352341 -42931971 + B4 SINE B4 17 110 -182 4 1175 21 71 0 0 chr13 77353448 77353490 -42930822 + AT_rich Low_complexity Low_complexity 1 42 0 4 1175 602 234 101 35 chr13 77353538 77353737 -42930575 - B3 SINE B2 -1 215 4 4 1175 380 252 73 109 chr13 77353958 77354123 -42930189 + ID_B1 SINE B4 66 224 0 4 1175 693 290 36 59 chr13 77354180 77354433 -42929879 - MER2 DNA MER2_type -12 333 87 4 1175 360 0 0 0 chr13 77354704 77354744 -42929568 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1175 360 0 0 0 chr13 77354744 77354783 -42929529 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1175 226 398 43 22 chr13 77355019 77355204 -42929108 + MIRb SINE MIR 34 222 -46 4 1175 274 317 0 0 chr13 77355373 77355433 -42928879 - ID4_ SINE ID -21 62 3 4 1175 3108 68 24 10 chr13 77355475 77355892 -42928420 - L1_Mus1 LINE L1 0 6567 6145 4 1175 3190 94 5 0 chr13 77355893 77356339 -42927973 + L1_Mm LINE L1 4659 5106 -777 4 1175 913 225 23 9 chr13 77356339 77356554 -42927758 - ID_B1 SINE B4 -2 222 5 4 1175 181 376 22 56 chr13 77356974 77357064 -42927248 + L2c LINE L2 2684 2770 -649 4 1175 339 344 108 31 chr13 77357280 77357568 -42926744 + L2c LINE L2 3073 3382 -5 4 1175 240 197 81 40 chr13 77357932 77358006 -42926306 + L3b LINE CR1 182 258 -224 4 1175 5617 75 21 7 chr13 77358362 77359777 -42924535 + L1VL2 LINE L1 232 1672 -1943 4 1175 594 0 0 0 chr13 77359879 77359945 -42924367 + (TCTA)n Simple_repeat Simple_repeat 2 67 0 4 1175 598 160 12 1 chr13 77359956 77360064 -42924248 - B1_Mus1 SINE Alu -37 112 3 4 1175 1001 192 16 0 chr13 77360080 77360262 -42924050 - B2_Mm2 SINE B2 -5 190 6 4 1175 287 300 9 65 chr13 77360630 77360737 -42923575 + MER5A DNA MER1_type 86 186 -3 4 1175 445 291 92 82 chr13 77361423 77361715 -42922597 - MER58B DNA MER1_type -33 308 14 4 1175 715 294 60 11 chr13 77363421 77363689 -42920623 + B4A SINE B4 1 281 -11 4 1175 23 0 0 0 chr13 77364589 77364612 -42919700 + AT_rich Low_complexity Low_complexity 1 23 0 4 1175 666 235 171 20 chr13 77364613 77364865 -42919447 - Lx9 LINE L1 -8 7636 7347 4 1175 308 350 8 41 chr13 77365048 77365170 -42919142 - MIR SINE MIR -138 124 7 4 1175 240 239 30 0 chr13 77366030 77366097 -42918215 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 4 1175 6645 80 68 15 chr13 77366252 77367262 -42917050 - Lx3_Mus LINE L1 0 7009 5946 4 1175 2614 92 24 36 chr13 77367262 77367678 -42916634 - IAPLTR2a LTR ERVK 0 411 1 4 1175 54260 25 16 20 chr13 77367678 77374165 -42910147 - IAPEz-int LTR ERVK 0 6481 18 4 1175 390 67 31 77 chr13 77374169 77374234 -42910078 - IAPEz-int LTR ERVK -6411 70 3 4 1175 2633 92 24 36 chr13 77374235 77374651 -42909661 - IAPLTR2a LTR ERVK 0 411 1 4 1175 15575 98 12 52 chr13 77374651 77375262 -42909050 - Lx3_Mus LINE L1 -1058 5951 5359 4 1175 5164 98 29 14 chr13 77375262 77376031 -42908281 - L1_Mus2 LINE L1 -1 6565 5786 5 1175 15575 120 13 106 chr13 77376031 77377622 -42906690 - Lx3_Mus LINE L1 -528 5358 3901 4 1175 189 0 0 0 chr13 77377622 77377643 -42906669 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1175 15575 120 13 106 chr13 77377643 77377951 -42906361 - Lx3_Mus LINE L1 -1986 3900 3588 4 1175 941 90 21 0 chr13 77377951 77378095 -42906217 + (TTCTCC)n Simple_repeat Simple_repeat 5 151 0 5 1175 15575 120 13 106 chr13 77378095 77378786 -42905526 - Lx3_Mus LINE L1 -2299 3587 3048 4 1175 234 176 0 0 chr13 77378824 77378875 -42905437 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1175 414 0 0 0 chr13 77379109 77379155 -42905157 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1175 269 276 26 79 chr13 77379434 77379548 -42904764 - PB1D10 SINE Alu -8 109 2 5 1175 22 35 0 0 chr13 77379560 77379589 -42904723 + AT_rich Low_complexity Low_complexity 1 29 0 5 1175 227 204 0 0 chr13 77380452 77380501 -42903811 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 5 1175 14366 79 19 3 chr13 77381309 77383974 -42900338 - L1_Mus2 LINE L1 0 6566 3857 5 1175 2176 121 86 6 chr13 77383973 77384321 -42899991 - Lx LINE L1 -93 6561 6186 5 1175 456 19 0 0 chr13 77387000 77387053 -42897259 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1175 673 244 0 43 chr13 77387053 77387185 -42897127 - RSINE1 SINE B4 -36 129 2 5 1175 453 148 0 0 chr13 77387657 77387738 -42896574 + (TAGA)n Simple_repeat Simple_repeat 1 81 0 5 1175 697 293 21 16 chr13 77389767 77389946 -42894366 + B3A SINE B2 1 180 -18 5 1175 387 0 0 0 chr13 77389946 77389989 -42894323 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1175 697 293 21 16 chr13 77389989 77390003 -42894309 + B3A SINE B2 181 194 -4 5 1175 2842 237 78 15 chr13 77390448 77391426 -42892886 + L1MC2 LINE L1 5188 6232 -112 5 1175 287 211 18 0 chr13 77391429 77391486 -42892826 + B3A SINE B2 1 58 -140 5 1175 250 304 90 45 chr13 77392413 77392568 -42891744 - RSINE1 SINE B4 -2 163 2 5 1175 213 217 0 48 chr13 77392781 77392844 -42891468 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 5 1175 585 265 23 68 chr13 77392892 77393111 -42891201 - B3 SINE B2 -6 210 2 5 1175 249 159 0 0 chr13 77393117 77393161 -42891151 + CT-rich Low_complexity Low_complexity 1 44 0 5 1175 1299 79 0 0 chr13 77393161 77393338 -42890974 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 5 1175 641 276 46 72 chr13 77393591 77393814 -42890498 + L1M2 LINE L1 5466 5674 -617 5 1175 565 92 18 18 chr13 77393814 77393925 -42890387 + (CAGA)n Simple_repeat Simple_repeat 2 112 0 5 1175 641 282 64 37 chr13 77393925 77394063 -42890249 + L1M2 LINE L1 5675 5823 -468 5 1175 4613 31 0 0 chr13 77394527 77395067 -42889245 + L1Md_T LINE L1 6043 6582 0 5 1175 326 379 72 72 chr13 77395089 77395464 -42888848 + LTR33A LTR ERVL 64 438 -82 5 1175 685 298 42 106 chr13 77395467 77395824 -42888488 - ORR1E LTR MaLR 0 359 26 5 1175 782 151 238 0 chr13 77395831 77396003 -42888309 - URR1A DNA MER1_type -13 213 1 5 1175 439 269 43 23 chr13 77397212 77397359 -42886953 - RSINE1 SINE B4 -13 152 4 5 1175 535 261 15 89 chr13 77397470 77397672 -42886640 - B3A SINE B2 -10 188 2 5 1175 1272 279 114 5 chr13 77397883 77398251 -42886061 + MTD LTR MaLR 12 419 0 5 1175 4050 95 0 5 chr13 77399441 77400001 -42884311 + L1_Mus4 LINE L1 6076 6632 -4 5 1175 1577 73 10 5 chr13 77400270 77400476 -42883836 - L1_Mus3 LINE L1 -308 6328 6122 5 1175 1963 91 35 28 chr13 77400476 77400794 -42883518 + L1_Mus3 LINE L1 6315 6634 -4 5 1175 21 0 0 0 chr13 77403455 77403476 -42880836 + AT_rich Low_complexity Low_complexity 1 21 0 5 1175 23 68 0 0 chr13 77405136 77405180 -42879132 + AT_rich Low_complexity Low_complexity 1 44 0 5 1175 504 299 7 7 chr13 77405773 77405921 -42878391 - B1F1 SINE Alu 0 149 2 5 1175 219 69 0 0 chr13 77407486 77407515 -42876797 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1175 797 200 14 0 chr13 77407588 77407733 -42876579 + B1_Mur3 SINE Alu 2 148 -1 5 1175 33 0 0 0 chr13 77408394 77408427 -42875885 + AT_rich Low_complexity Low_complexity 1 33 0 5 1175 24 0 0 0 chr13 77408518 77408542 -42875770 + AT_rich Low_complexity Low_complexity 1 24 0 5 1175 48 0 0 0 chr13 77408673 77408721 -42875591 + AT_rich Low_complexity Low_complexity 1 48 0 5 1175 241 396 18 36 chr13 77409442 77409552 -42874760 - PB1D10 SINE Alu -8 109 2 5 1175 459 0 0 0 chr13 77409586 77409637 -42874675 + (TG)n Simple_repeat Simple_repeat 1 51 0 5 1175 256 329 71 0 chr13 77409660 77409745 -42874567 - B3A SINE B2 -1 197 107 5 1175 32 57 0 0 chr13 77409760 77409813 -42874499 + AT_rich Low_complexity Low_complexity 1 53 0 5 1175 21 82 0 0 chr13 77410119 77410168 -42874144 + AT_rich Low_complexity Low_complexity 1 49 0 5 1175 21 0 0 0 chr13 77412645 77412666 -42871646 + AT_rich Low_complexity Low_complexity 1 21 0 5 1175 352 281 224 3 chr13 77412666 77412952 -42871360 + L1MB7 LINE L1 5682 6030 -154 5 1175 210 315 14 14 chr13 77413064 77413138 -42871174 + PB1D10 SINE Alu 44 117 0 5 1175 1980 112 10 0 chr13 77413656 77413946 -42870366 + L1_Mus3 LINE L1 5349 5641 -997 5 1175 209 184 0 0 chr13 77414018 77414056 -42870256 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 5 1175 616 234 7 14 chr13 77414064 77414211 -42870101 - B1_Mm SINE Alu -1 146 1 5 1175 284 208 19 0 chr13 77414220 77414273 -42870039 - PB1D9 SINE Alu -5 115 62 5 1175 993 55 8 0 chr13 77415068 77415195 -42869117 - L1_Mus2 LINE L1 -327 6239 6112 5 1175 2098 95 3 96 chr13 77415195 77415569 -42868743 + L1_Mus2 LINE L1 6228 6566 0 5 1175 1012 271 63 33 chr13 77415578 77415944 -42868368 + Lx6 LINE L1 7009 7385 -75 5 1175 279 0 0 0 chr13 77416735 77416766 -42867546 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1175 183 156 0 0 chr13 77416894 77416926 -42867386 + (CATA)n Simple_repeat Simple_repeat 2 33 0 5 1175 231 36 0 0 chr13 77417348 77417376 -42866936 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1175 306 50 0 0 chr13 77417519 77417559 -42866753 + (TTA)n Simple_repeat Simple_repeat 3 42 0 5 1175 1541 290 42 33 chr13 77417562 77418114 -42866198 - Lx6 LINE L1 -31 7429 6483 5 1175 246 379 123 34 chr13 77418558 77418850 -42865462 + L2 LINE L2 2107 2424 -995 5 1175 1879 191 35 37 chr13 77419149 77419584 -42864728 + Lx4B LINE L1 6590 7023 -35 5 1175 402 21 0 0 chr13 77420096 77420143 -42864169 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1175 249 258 186 0 chr13 77421077 77421174 -42863138 - Lx7 LINE L1 -523 7173 7059 5 1175 240 312 110 7 chr13 77421481 77421636 -42862676 + L1M5 LINE L1 5555 5725 -399 5 1175 3451 34 14 0 chr13 77423646 77424064 -42860248 + L1Md_F3 LINE L1 6160 6583 -1 5 1175 24 0 0 0 chr13 77424154 77424178 -42860134 + AT_rich Low_complexity Low_complexity 1 24 0 5 1175 8398 121 47 32 chr13 77424231 77426283 -42858029 - L1_Mus2 LINE L1 0 6566 4480 5 1175 371 292 56 40 chr13 77426292 77426417 -42857895 - RSINE1 SINE B4 -36 129 3 5 1175 1652 198 65 24 chr13 77426908 77427370 -42856942 - MT2A LTR ERVL -5 528 1 5 1175 782 227 0 0 chr13 77428044 77428194 -42856118 - B1_Mur4 SINE Alu 0 150 1 5 1175 243 314 180 32 chr13 77428354 77428604 -42855708 + L2 LINE L2 2473 2759 -660 5 1175 22 35 0 0 chr13 77429182 77429211 -42855101 + AT_rich Low_complexity Low_complexity 1 29 0 5 1175 431 214 42 27 chr13 77429346 77429500 -42854812 - RMER17B LTR ERVK -399 507 321 5 1175 23 0 0 0 chr13 77429657 77429680 -42854632 + AT_rich Low_complexity Low_complexity 1 23 0 5 1175 823 169 6 6 chr13 77429932 77430110 -42854202 + (TAGA)n Simple_repeat Simple_repeat 3 180 0 5 1175 432 0 0 0 chr13 77430702 77430750 -42853562 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 5 1175 180 275 42 28 chr13 77431718 77431789 -42852523 + MIRb SINE MIR 4 75 -193 5 1175 1092 115 0 0 chr13 77431900 77432048 -42852264 - B1_Mus1 SINE Alu 0 148 1 5 1175 603 272 158 21 chr13 77432280 77432406 -42851906 - Lx9 LINE L1 -8 7636 7511 5 1175 300 102 0 0 chr13 77432406 77432455 -42851857 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1175 603 272 158 21 chr13 77432455 77432613 -42851699 - Lx9 LINE L1 -134 7510 7313 5 1175 338 336 134 0 chr13 77432757 77432891 -42851421 - ID_B1 SINE B4 -6 218 67 5 1175 276 316 62 12 chr13 77432884 77432964 -42851348 - ID_B1 SINE B4 -107 117 34 5 1175 792 96 0 0 chr13 77433212 77433327 -42850985 + (GGGA)n Simple_repeat Simple_repeat 4 118 0 5 1175 492 72 0 0 chr13 77434857 77434926 -42849386 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1175 1088 90 0 0 chr13 77435325 77435469 -42848843 - B1_Mus1 SINE Alu 0 148 5 5 1175 946 83 14 43 chr13 77435474 77435622 -42848690 + B1_Mus2 SINE Alu 10 147 0 5 1175 888 193 36 6 chr13 77436524 77436691 -42847621 - MTC LTR MaLR 0 421 250 5 1175 919 162 11 0 chr13 77437188 77437463 -42846849 + (CA)n Simple_repeat Simple_repeat 1 278 0 5 1175 837 233 96 106 chr13 77439282 77439661 -42844651 - MT2B2 LTR ERVL -54 530 20 5 1175 2616 94 24 17 chr13 77439763 77440183 -42844129 + MusHAL1 LINE L1 616 1038 -1674 5 1175 3767 157 30 1 chr13 77440206 77440870 -42843442 + Lx2 LINE L1 5849 6531 -466 5 1175 1235 130 138 5 chr13 77440871 77441088 -42843224 - Lx3B LINE L1 -189 6784 6539 5 1175 189 107 0 0 chr13 77441308 77441336 -42842976 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1175 408 40 0 0 chr13 77441559 77441609 -42842703 + (CAAA)n Simple_repeat Simple_repeat 1 50 0 5 1175 22 35 0 0 chr13 77441782 77441811 -42842501 + AT_rich Low_complexity Low_complexity 1 29 0 5 1175 29 70 0 0 chr13 77442249 77442306 -42842006 + AT_rich Low_complexity Low_complexity 1 57 0 5 1175 292 183 16 16 chr13 77442966 77443027 -42841285 + MTD LTR MaLR 59 119 -300 5 1175 3310 217 107 44 chr13 77443033 77443271 -42841041 - Lx7 LINE L1 -4 7692 7423 5 1175 783 70 0 0 chr13 77443271 77443386 -42840926 + (GA)n Simple_repeat Simple_repeat 2 116 0 5 1175 3310 217 107 44 chr13 77443386 77444120 -42840192 - Lx7 LINE L1 -274 7422 6659 5 1175 323 222 62 62 chr13 77444120 77444216 -42840096 + MTD LTR MaLR 91 186 -233 5 1175 643 0 0 35 chr13 77444216 77444301 -42840011 + (TTAGGG)n Simple_repeat Simple_repeat 5 86 0 6 1175 236 271 47 94 chr13 77444301 77444316 -42839996 + MTD LTR MaLR 187 198 -223 5 1175 644 263 66 21 chr13 77444380 77444569 -42839743 + MTD LTR MaLR 173 375 -46 5 1175 3604 140 7 2 chr13 77444580 77445153 -42839159 - Lx LINE L1 -6 6648 6073 6 1175 5979 15 1 0 chr13 77445153 77445868 -42838444 + MTA_Mm-int LTR MaLR 383 1098 0 6 1175 3515 20 0 0 chr13 77445868 77446264 -42838048 + MTA_Mm LTR MaLR 1 396 0 6 1175 3329 157 11 0 chr13 77446266 77446833 -42837479 - L1_Mm LINE L1 -14 5869 5297 6 1175 16510 152 118 8 chr13 77446853 77452229 -42832083 - L1_Mus1 LINE L1 0 6567 565 6 1175 321 115 19 0 chr13 77452230 77452282 -42832030 + MTD LTR MaLR 362 414 -5 5 1175 215 276 0 0 chr13 77452381 77452439 -42831873 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1175 283 340 56 118 chr13 77452441 77452469 -42831843 - B4 SINE B4 -2 290 269 6 1175 351 0 0 0 chr13 77452469 77452508 -42831804 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1175 283 340 56 118 chr13 77452508 77452783 -42831529 - B4 SINE B4 -24 268 6 6 1175 844 185 25 55 chr13 77453385 77453585 -42830727 - B2_Mm2 SINE B2 0 195 2 6 1175 740 158 7 66 chr13 77454214 77454350 -42829962 + B1_Mur4 SINE Alu 16 143 -7 6 1175 1095 89 7 0 chr13 77454757 77454903 -42829409 - B1_Mus2 SINE Alu 0 147 1 6 1175 207 0 0 0 chr13 77454907 77454930 -42829382 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1175 216 268 0 40 chr13 77455226 77455300 -42829012 - BC1_Mm scRNA scRNA -67 85 15 6 1175 928 234 107 30 chr13 77456080 77456380 -42827932 - Lx9 LINE L1 0 7644 7322 6 1175 600 14 0 0 chr13 77457604 77457673 -42826639 + (TTTC)n Simple_repeat Simple_repeat 2 70 0 6 1175 604 252 148 14 chr13 77457759 77457968 -42826344 + Tigger7 DNA MER2_type 2252 2488 -3 6 1175 228 393 20 20 chr13 77458153 77458348 -42825964 + Charlie7 DNA MER1_type 103 297 -2315 6 1175 297 340 174 40 chr13 77458490 77458714 -42825598 + Charlie7 DNA MER1_type 486 739 -1873 6 1175 527 343 113 52 chr13 77458733 77459191 -42825121 + Charlie7 DNA MER1_type 981 1466 -1146 6 1175 229 325 12 0 chr13 77459243 77459326 -42824986 + Charlie7 DNA MER1_type 2010 2093 -519 6 1175 1683 221 102 23 chr13 77459490 77459930 -42824382 - Lx2B LINE L1 -10 6990 6516 6 1175 27 29 0 0 chr13 77460010 77460044 -42824268 + AT_rich Low_complexity Low_complexity 1 34 0 6 1175 1163 75 0 0 chr13 77460382 77460528 -42823784 + B1_Mm SINE Alu 2 147 0 6 1175 1172 191 5 0 chr13 77460683 77460892 -42823420 - B3 SINE B2 -6 210 1 6 1175 639 311 34 0 chr13 77461358 77461564 -42822748 + ID_B1 SINE B4 4 216 -8 6 1175 402 289 28 112 chr13 77461627 77461806 -42822506 + MER20 DNA MER1_type 56 219 0 6 1176 181 57 0 54 chr13 77464175 77464212 -42820100 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 6 1176 21 0 0 0 chr13 77465176 77465197 -42819115 + AT_rich Low_complexity Low_complexity 1 21 0 6 1176 387 0 0 0 chr13 77466525 77466568 -42817744 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1176 609 293 7 0 chr13 77467776 77467916 -42816396 - B1_Mur1 SINE Alu -6 143 3 6 1176 216 413 30 72 chr13 77467916 77467934 -42816378 - B4 SINE B4 -63 183 70 6 1176 497 213 232 0 chr13 77468103 77468267 -42816045 + Lx9 LINE L1 7150 7351 -293 6 1176 463 200 0 31 chr13 77468267 77468365 -42815947 + URR1B DNA MER1_type 131 225 0 6 1176 6645 78 79 12 chr13 77468587 77469765 -42814547 - L1_Mus3 LINE L1 0 6638 5379 6 1176 463 349 34 7 chr13 77469767 77469914 -42814398 - RSINE1 SINE B4 -6 159 9 6 1176 483 18 0 0 chr13 77470391 77470447 -42813865 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1176 236 196 59 0 chr13 77472394 77472445 -42811867 + CT-rich Low_complexity Low_complexity 1 54 0 6 1176 21 0 0 0 chr13 77473302 77473323 -42810989 + AT_rich Low_complexity Low_complexity 1 21 0 6 1176 208 143 0 0 chr13 77474307 77474342 -42809970 + (A)n Simple_repeat Simple_repeat 1 35 0 6 1176 25 51 0 0 chr13 77475977 77476016 -42808296 + AT_rich Low_complexity Low_complexity 1 39 0 6 1176 325 321 124 29 chr13 77476464 77476737 -42807575 + L2a LINE L2 3128 3426 0 6 1176 3810 42 0 0 chr13 77477149 77477603 -42806709 + L1_Mus1 LINE L1 6114 6567 0 6 1176 396 0 0 0 chr13 77478711 77478755 -42805557 + (CTG)n Simple_repeat Simple_repeat 1 44 0 6 1176 180 235 78 0 chr13 77479070 77479121 -42805191 - MIR SINE MIR -155 107 53 6 1176 1124 48 7 0 chr13 77479174 77479321 -42804991 + (TCTCC)n Simple_repeat Simple_repeat 3 150 0 6 1176 21 0 0 0 chr13 77481356 77481377 -42802935 + AT_rich Low_complexity Low_complexity 1 21 0 6 1176 459 82 10 58 chr13 77481657 77481761 -42802551 + (GGAGA)n Simple_repeat Simple_repeat 3 101 0 6 1176 29 47 0 0 chr13 77482243 77482286 -42802026 + AT_rich Low_complexity Low_complexity 1 43 0 6 1176 283 354 85 55 chr13 77483098 77483370 -42800942 + ORR1E LTR MaLR 60 339 -20 6 1176 513 304 71 66 chr13 77483452 77483785 -42800527 + ORR1E LTR MaLR 1 330 -44 6 1176 485 0 33 0 chr13 77484574 77484634 -42799678 + (TATG)n Simple_repeat Simple_repeat 2 63 0 6 1176 278 284 51 31 chr13 77485196 77485294 -42799018 - MTE2a LTR MaLR -13 366 267 6 1176 240 35 0 0 chr13 77488374 77488403 -42795909 + (TC)n Simple_repeat Simple_repeat 2 30 0 6 1176 28607 109 18 35 chr13 77488453 77493391 -42790921 - L1_Mus2 LINE L1 0 6566 1603 6 1176 762 11 0 0 chr13 77493391 77493478 -42790834 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 6 1176 28607 130 13 58 chr13 77493478 77494390 -42789922 - L1_Mus2 LINE L1 -4281 1602 867 6 1176 1629 120 32 14 chr13 77494372 77494652 -42789660 - L1_Mm LINE L1 -3030 2853 2569 6 1176 778 192 24 0 chr13 77494638 77494805 -42789507 - L1_Mus2 LINE L1 -5721 895 725 6 1176 433 246 21 28 chr13 77494802 77494944 -42789368 - L1_Mus2 LINE L1 -5801 815 675 6 1176 435 245 30 154 chr13 77495027 77495196 -42789116 - L1VL1 LINE L1 -6067 355 208 6 1176 610 312 10 5 chr13 77495224 77495417 -42788895 - B3A SINE B2 -3 195 2 6 1176 324 0 0 0 chr13 77495875 77495911 -42788401 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 1176 6530 145 49 6 chr13 77497163 77497842 -42786470 - L1_Mur1 LINE L1 -3228 2658 1931 6 1176 270 0 0 0 chr13 77497842 77497872 -42786440 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1176 6530 145 49 6 chr13 77497872 77498421 -42785891 - L1_Mur1 LINE L1 -3956 1930 1378 6 1176 522 0 0 0 chr13 77498421 77498479 -42785833 + (TC)n Simple_repeat Simple_repeat 1 58 0 6 1176 384 152 0 0 chr13 77498482 77498548 -42785764 + (TA)n Simple_repeat Simple_repeat 2 67 0 6 1176 3598 142 22 2 chr13 77498569 77499153 -42785159 - Lx3_Mus LINE L1 -108 6901 6306 6 1176 2758 173 37 0 chr13 77499142 77499678 -42784634 - L1_Mur1 LINE L1 -5645 1339 707 6 1176 301 267 67 0 chr13 77500069 77500159 -42784153 - Cheshire DNA MER1_type -9 2411 2316 1 1176 3272 179 18 26 chr13 77500475 77501099 -42783213 - Lx4B LINE L1 -377 6681 6063 2 1176 1412 111 37 0 chr13 77501118 77501137 -42783175 + ORR1A1 LTR MaLR 123 141 -205 3 1176 5353 97 14 3 chr13 77501137 77501920 -42782392 - L1_Mus3 LINE L1 -7 6631 5840 4 1176 1412 111 37 0 chr13 77501920 77502116 -42782196 + ORR1A1 LTR MaLR 142 345 -1 3 1176 11941 69 27 33 chr13 77502116 77502927 -42781385 + ORR1A1-int LTR MaLR 1 792 -1000 3 1176 8043 47 2 3 chr13 77502927 77503920 -42780392 + L1Md_F2 LINE L1 5587 6578 -4 5 1176 11941 69 27 33 chr13 77503920 77504912 -42779400 + ORR1A1-int LTR MaLR 793 1792 0 3 1176 2643 67 6 0 chr13 77504912 77505255 -42779057 + ORR1A1 LTR MaLR 1 345 -1 3 1176 1472 178 124 35 chr13 77505256 77505594 -42778718 + RLTR19 LTR ERVK 86 453 -46 6 1176 1792 112 5 19 chr13 77505614 77505915 -42778397 - L1_Mus2 LINE L1 -707 5859 5587 7 1176 37931 44 0 3 chr13 77505934 77512382 -42771930 - L1Md_T LINE L1 0 6585 59 8 1176 1135 75 0 0 chr13 77512397 77512544 -42771768 - B1_Mus2 SINE Alu 0 147 1 9 1176 13782 124 16 3 chr13 77512545 77514740 -42769572 - L1_Mm LINE L1 -312 5571 3350 1 1176 37622 41 0 3 chr13 77514793 77520816 -42763496 - L1Md_T LINE L1 0 6585 479 1 1176 9721 117 33 5 chr13 77520816 77522468 -42761844 - MusHAL1 LINE L1 -558 3001 1305 1 1176 3075 92 19 2 chr13 77522465 77522940 -42761372 - MusHAL1 LINE L1 -2753 807 103 1 1176 195 129 0 0 chr13 77523420 77523451 -42760861 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 1 1176 573 302 85 59 chr13 77523651 77523922 -42760390 + B4 SINE B4 1 278 -14 1 1176 471 35 0 0 chr13 77523942 77523999 -42760313 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1176 591 90 29 20 chr13 77526337 77526439 -42757873 + Lx LINE L1 6545 6647 -7 1 1176 34 0 0 0 chr13 77529144 77529178 -42755134 + AT_rich Low_complexity Low_complexity 1 34 0 1 1176 274 388 91 14 chr13 77529871 77530080 -42754232 + MIR SINE MIR 30 254 -8 1 1176 190 420 0 64 chr13 77531040 77531134 -42753178 - MIRm SINE MIR -34 242 155 1 1176 243 0 0 0 chr13 77531274 77531301 -42753011 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1176 25 0 0 0 chr13 77532427 77532452 -42751860 + AT_rich Low_complexity Low_complexity 1 25 0 2 1176 277 331 38 15 chr13 77532754 77532886 -42751426 - MamRep1161 DNA TcMar -822 135 1 2 1176 21 0 0 0 chr13 77533036 77533057 -42751255 + AT_rich Low_complexity Low_complexity 1 21 0 2 1176 25 31 0 0 chr13 77533163 77533195 -42751117 + AT_rich Low_complexity Low_complexity 1 32 0 2 1176 362 294 140 0 chr13 77533453 77533596 -42750716 - MIRc SINE MIR -103 165 3 2 1176 335 340 176 0 chr13 77534127 77534280 -42750032 + B4A SINE B4 2 181 -111 2 1176 246 310 0 12 chr13 77534289 77534374 -42749938 + (CA)n Simple_repeat Simple_repeat 1 84 0 2 1176 340 198 209 0 chr13 77534385 77534471 -42749841 + PB1D10 SINE Alu 3 106 -11 2 1176 243 193 18 0 chr13 77534946 77535003 -42749309 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1176 26 30 0 0 chr13 77538599 77538632 -42745680 + AT_rich Low_complexity Low_complexity 1 33 0 3 1176 405 0 0 0 chr13 77539523 77539568 -42744744 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 3 1176 225 94 0 0 chr13 77541251 77541283 -42743029 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1176 562 263 217 6 chr13 77542163 77542343 -42741969 + ID_B1 SINE B4 1 218 -6 3 1176 4767 68 39 2 chr13 77543327 77543962 -42740350 - L1_Mus1 LINE L1 0 6567 5909 3 1176 4603 89 1 0 chr13 77543963 77544620 -42739692 + L1_Mus1 LINE L1 5266 5923 -661 3 1176 491 289 12 86 chr13 77545662 77545825 -42738487 + B4 SINE B4 70 220 -72 3 1176 796 196 0 34 chr13 77545685 77545833 -42738479 + B1_Mur1 SINE Alu 7 149 0 3 1176 211 154 0 84 chr13 77545836 77545907 -42738405 + A-rich Low_complexity Low_complexity 6 70 0 3 1176 211 194 0 0 chr13 77547247 77547283 -42737029 + GA-rich Low_complexity Low_complexity 4 39 0 3 1176 33 56 0 0 chr13 77547611 77547665 -42736647 + AT_rich Low_complexity Low_complexity 1 54 0 3 1176 617 204 134 169 chr13 77547875 77548076 -42736236 + B3 SINE B2 1 194 -1 4 1176 26 0 0 0 chr13 77548747 77548773 -42735539 + AT_rich Low_complexity Low_complexity 1 26 0 4 1176 405 288 52 2 chr13 77548786 77548893 -42735419 - B1F SINE Alu -2 118 9 4 1176 276 341 90 69 chr13 77549165 77549442 -42734870 - B4 SINE B4 -8 284 2 4 1176 22 35 0 0 chr13 77549498 77549527 -42734785 + AT_rich Low_complexity Low_complexity 1 29 0 4 1176 702 300 111 51 chr13 77552153 77552504 -42731808 - MTD LTR MaLR -47 372 1 4 1176 261 0 0 0 chr13 77552611 77552640 -42731672 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1176 22 35 0 0 chr13 77552753 77552782 -42731530 + AT_rich Low_complexity Low_complexity 1 29 0 4 1176 195 114 0 0 chr13 77553572 77553607 -42730705 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1176 221 316 12 73 chr13 77553827 77553909 -42730403 + ID4 SINE ID 5 81 -2 4 1176 25 51 0 0 chr13 77554759 77554798 -42729514 + AT_rich Low_complexity Low_complexity 1 39 0 5 1176 2865 47 3 67 chr13 77555955 77556345 -42727967 + RLTR10B2 LTR ERVK 1 365 0 5 1176 303 331 133 11 chr13 77557101 77557281 -42727031 - MIRb SINE MIR 0 268 67 5 1176 661 183 8 8 chr13 77557438 77557559 -42726753 - RMER6D LTR ERVK -3 717 597 5 1176 782 276 133 92 chr13 77557708 77558226 -42726086 - RMER13A LTR ERVK -22 605 30 5 1176 2260 165 169 44 chr13 77558267 77558807 -42725505 - RMER6D LTR ERVK -113 607 1 5 1176 266 180 32 16 chr13 77559082 77559144 -42725168 + CT-rich Low_complexity Low_complexity 3 65 0 5 1176 183 80 0 0 chr13 77559145 77559170 -42725142 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1176 4083 121 25 24 chr13 77559813 77560650 -42723662 - L1_Mus3 LINE L1 0 6638 5730 5 1176 5980 123 36 21 chr13 77560635 77562407 -42721905 - L1VL1 LINE L1 -1706 1992 190 5 1176 7853 25 1 1 chr13 77562420 77563376 -42720936 - L1Md_F3 LINE L1 0 6584 5629 5 1176 849 93 1 0 chr13 77563376 77563500 -42720812 + L1_Mm LINE L1 5504 5657 -687 6 1176 195 268 164 27 chr13 77563745 77563818 -42720494 - L2a LINE L2 0 3426 3344 6 1176 6507 88 11 13 chr13 77565839 77566761 -42717551 - L1_Mus2 LINE L1 -2 6564 5648 6 1176 624 255 62 53 chr13 77566761 77567117 -42717195 + RLTR10D LTR ERVK 1 359 0 6 1176 6507 126 15 12 chr13 77567117 77567805 -42716507 - L1_Mus2 LINE L1 -919 5647 4947 6 1176 1755 115 0 0 chr13 77567812 77568099 -42716213 - L1_Mus2 LINE L1 -2473 3410 3124 6 1176 382 88 0 0 chr13 77568087 77568144 -42716168 - MusHAL1 LINE L1 -911 1801 1745 6 1176 33839 45 0 3 chr13 77568144 77573491 -42710821 + L1Md_T LINE L1 162 5589 -297 6 1176 8333 29 15 0 chr13 77573491 77574472 -42709840 + L1Md_T LINE L1 5590 6585 0 6 1176 3767 105 10 2 chr13 77574486 77575086 -42709226 - L1_Mus2 LINE L1 -2919 2964 2360 6 1176 3864 121 38 8 chr13 77575088 77575740 -42708572 + RMER17A LTR ERVK 80 751 0 6 1176 346 290 99 0 chr13 77576337 77576468 -42707844 + MER20 DNA MER1_type 27 170 -49 6 1176 1512 221 61 78 chr13 77576545 77576971 -42707341 + MTD LTR MaLR 1 419 0 6 1176 414 0 0 0 chr13 77577124 77577170 -42707142 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1176 214 176 10 99 chr13 77577985 77578024 -42706288 + T-rich Low_complexity Low_complexity 58 93 0 7 1176 195 69 0 0 chr13 77578024 77578053 -42706259 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1176 214 176 10 99 chr13 77578053 77578114 -42706198 + T-rich Low_complexity Low_complexity 2 57 0 7 1176 1087 47 0 0 chr13 77578170 77578318 -42705994 - GSAT_MM Satellite Satellite -264 207 60 7 1176 9460 89 9 30 chr13 77579645 77580778 -42703534 - Lx3_Mus LINE L1 0 7009 5908 7 1176 210 37 0 0 chr13 77580778 77580805 -42703507 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 7 1176 30788 84 15 6 chr13 77580805 77581581 -42702731 - Lx3_Mus LINE L1 -1102 5907 5131 7 1176 1114 88 7 0 chr13 77581581 77581728 -42702584 + B1_Mus1 SINE Alu 1 148 0 7 1176 30788 94 32 6 chr13 77581728 77586200 -42698112 - Lx3_Mus LINE L1 -756 5130 246 7 1176 242 204 0 0 chr13 77587210 77587259 -42697053 + MTE2a LTR MaLR 2 50 -329 7 1176 985 113 12 0 chr13 77588314 77588482 -42695830 + (TTTC)n Simple_repeat Simple_repeat 1 170 0 7 1176 287 164 0 16 chr13 77588482 77588544 -42695768 + CT-rich Low_complexity Low_complexity 2 62 0 7 1176 21 0 0 0 chr13 77589511 77589532 -42694780 + AT_rich Low_complexity Low_complexity 1 21 0 8 1176 180 0 0 0 chr13 77591163 77591183 -42693129 + (TG)n Simple_repeat Simple_repeat 1 20 0 8 1176 546 16 0 0 chr13 77591183 77591245 -42693067 + (GA)n Simple_repeat Simple_repeat 1 63 0 8 1176 293 275 28 42 chr13 77591683 77591755 -42692557 - ID4 SINE ID -5 78 8 8 1176 1346 180 28 3 chr13 77592467 77592757 -42691555 + Lx9 LINE L1 7339 7635 -9 8 1176 1331 207 64 16 chr13 77593170 77593527 -42690785 - Lx LINE L1 -1 6999 6319 8 1176 380 318 15 22 chr13 77594244 77594379 -42689933 - ID_B1 SINE B4 0 224 91 8 1176 477 304 62 0 chr13 77594374 77594535 -42689777 - Charlie1a DNA MER1_type -326 1129 959 8 18 748 249 17 0 chr13 77594552 77594729 -42689583 - Lx6 LINE L1 -11 7449 7270 8 1177 850 252 97 79 chr13 77594754 77595095 -42689217 - RLTR21 LTR ERVK -1 1571 1225 8 1177 525 261 3 0 chr13 77595152 77595464 -42688848 + (TA)n Simple_repeat Simple_repeat 1 312 0 9 1177 633 224 4 13 chr13 77595490 77595731 -42688581 + (TA)n Simple_repeat Simple_repeat 1 238 0 9 1177 341 131 16 0 chr13 77595808 77595869 -42688443 + (TA)n Simple_repeat Simple_repeat 1 62 0 9 1177 588 14 0 0 chr13 77595929 77596000 -42688312 - L1_Mus4 LINE L1 -881 5755 5685 9 1177 5313 41 0 0 chr13 77595991 77596715 -42687597 + L1Md_F2 LINE L1 5896 6582 0 9 1177 11980 199 121 60 chr13 77596716 77597752 -42686560 - L1_Mur3 LINE L1 -209 5671 4692 9 1177 1200 54 0 13 chr13 77597752 77597901 -42686411 + B1_Mm SINE Alu 1 147 0 9 1177 11980 199 121 60 chr13 77597901 77600276 -42684036 - L1_Mur3 LINE L1 -1189 4691 2058 9 1177 360 0 0 0 chr13 77600276 77600316 -42683996 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1177 11980 199 121 60 chr13 77600316 77601066 -42683246 - L1_Mur3 LINE L1 -3823 2057 1258 9 1177 270 0 0 0 chr13 77601066 77601096 -42683216 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 9 1177 11980 261 67 75 chr13 77601096 77601777 -42682535 - L1_Mur3 LINE L1 -6471 1257 601 9 1177 1368 147 9 9 chr13 77601777 77602003 -42682309 + URR1A DNA MER1_type 1 226 0 9 1177 3161 266 63 76 chr13 77602003 77602501 -42681811 - L1_Mur3 LINE L1 -7128 600 79 9 1177 238 277 15 0 chr13 77602538 77602603 -42681709 - Charlie1a DNA MER1_type -576 879 814 8 1177 525 303 169 20 chr13 77603041 77603450 -42680862 - Charlie1a DNA MER1_type -656 799 330 8 1177 238 289 0 0 chr13 77604018 77604063 -42680249 - RSINE1 SINE B4 -10 155 111 9 1177 372 364 22 60 chr13 77604084 77604268 -42680044 - B4A SINE B4 -114 178 2 1 1177 426 143 0 0 chr13 77604293 77604370 -42679942 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1177 260 300 23 0 chr13 77604684 77604778 -42679534 - L1MC LINE L1 -2286 5596 5504 1 1177 893 311 67 16 chr13 77604955 77605400 -42678912 - Lx8 LINE L1 -181 7292 6825 1 1177 1526 259 49 25 chr13 77605398 77605969 -42678343 - L1_Rod LINE L1 -2 5845 5261 1 1177 390 219 38 0 chr13 77606208 77606313 -42677999 - Lx9 LINE L1 -220 7424 7316 1 1177 1560 286 29 4 chr13 77606401 77606879 -42677433 + Lx9 LINE L1 6345 6834 -810 1 1177 5442 123 20 13 chr13 77606961 77607809 -42676503 - Lx2 LINE L1 0 6997 6144 1 1177 268 237 140 7 chr13 77607811 77607947 -42676365 - L1_Mur2 LINE L1 -587 5293 5140 1 1177 771 280 38 24 chr13 77607944 77608368 -42675944 - L1_Mur2 LINE L1 -900 4977 4548 1 1177 237 100 151 0 chr13 77608370 77608445 -42675867 + L1_Mur3 LINE L1 4439 4538 -1339 1 1177 435 226 26 0 chr13 77608467 77608582 -42675730 + L1_Mur3 LINE L1 4373 4490 -1390 1 1177 272 267 15 0 chr13 77614296 77614386 -42669926 + MIR SINE MIR 57 147 -129 1 1177 378 188 0 0 chr13 77614486 77614582 -42669730 + GA-rich Low_complexity Low_complexity 1 96 0 1 1177 348 341 110 33 chr13 77614653 77614835 -42669477 - MamSINE1 SINE tRNA -82 208 13 1 1177 697 133 15 0 chr13 77615176 77615311 -42669001 + (TA)n Simple_repeat Simple_repeat 2 138 0 1 1177 263 211 11 0 chr13 77615305 77615400 -42668912 + (CA)n Simple_repeat Simple_repeat 2 97 0 1 1177 243 146 0 0 chr13 77618560 77618601 -42665711 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1177 180 0 0 0 chr13 77618741 77618761 -42665551 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 1177 381 43 0 0 chr13 77619248 77619295 -42665017 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1177 675 117 0 0 chr13 77619295 77619398 -42664914 + (GGGA)n Simple_repeat Simple_repeat 3 105 0 1 1177 2325 315 33 57 chr13 77619405 77620449 -42663863 - Lx9 LINE L1 -204 7440 6422 1 1177 260 384 172 0 chr13 77621086 77621237 -42663075 + MER45A DNA Tip100 2 178 0 1 1177 270 0 0 0 chr13 77621370 77621400 -42662912 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1177 246 42 41 20 chr13 77622176 77622225 -42662087 + (TTTG)n Simple_repeat Simple_repeat 2 51 0 1 1177 1462 105 9 5 chr13 77622433 77622653 -42661659 + L1_Mus3 LINE L1 6415 6635 -3 1 1177 262 342 96 9 chr13 77623121 77623236 -42661076 + MIRb SINE MIR 9 133 -135 1 1177 218 292 246 0 chr13 77624261 77624326 -42659986 + PB1D10 SINE Alu 3 83 -34 1 1177 351 0 0 0 chr13 77624327 77624366 -42659946 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1177 217 362 0 19 chr13 77624502 77624609 -42659703 + GA-rich Low_complexity Low_complexity 1 105 0 1 1177 1091 68 7 0 chr13 77625167 77625315 -42658997 - L1Md_F2 LINE L1 -13 6569 6421 1 1177 210 289 0 0 chr13 77625995 77626040 -42658272 + Alu SINE Alu 20 64 -250 1 1177 207 0 0 0 chr13 77626396 77626419 -42657893 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1177 286 273 99 20 chr13 77626422 77626523 -42657789 - Lx6 LINE L1 -43 7417 7309 1 1177 273 98 0 0 chr13 77626565 77626606 -42657706 + (TAA)n Simple_repeat Simple_repeat 2 42 0 1 1177 1224 280 108 11 chr13 77626642 77627021 -42657291 + MTC LTR MaLR 6 421 0 1 1177 779 260 61 0 chr13 77627156 77627352 -42656960 - B3 SINE B2 -8 208 1 1 1177 1558 186 182 24 chr13 77627559 77627977 -42656335 + Lx5 LINE L1 6567 7050 0 1 1177 325 278 35 76 chr13 77630817 77630961 -42653351 + RSINE1 SINE B4 27 164 -1 1 1177 213 39 0 0 chr13 77630961 77630987 -42653325 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1 1177 6096 126 18 5 chr13 77632461 77633435 -42650877 - L1_Mm LINE L1 -388 5495 4510 1 1177 7587 90 11 1 chr13 77633453 77634531 -42649781 + L1_Mus3 LINE L1 5543 6631 -7 1 1177 1187 269 122 10 chr13 77634855 77635250 -42649062 - Lx8 LINE L1 0 7473 7035 1 1177 1422 207 144 34 chr13 77635254 77635708 -42648604 - RMER6C LTR ERVK 0 690 106 1 1177 520 127 0 12 chr13 77635708 77635788 -42648524 - MT2B LTR ERVL -342 259 181 1 1177 1422 207 144 34 chr13 77635788 77635868 -42648444 - RMER6C LTR ERVK 0 105 1 1 1177 1873 275 82 44 chr13 77635868 77636378 -42647934 - Lx8 LINE L1 -437 7036 6528 1 1177 657 38 0 0 chr13 77636378 77636458 -42647854 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 1177 1873 275 82 44 chr13 77636458 77636677 -42647635 - Lx8 LINE L1 -946 6527 6280 1 1177 920 270 72 32 chr13 77636710 77637142 -42647170 - L1MB3 LINE L1 -2 6181 5733 1 1177 491 117 39 0 chr13 77637284 77637387 -42646925 + (TAGA)n Simple_repeat Simple_repeat 4 110 0 1 1177 22 70 0 0 chr13 77637601 77637644 -42646668 + AT_rich Low_complexity Low_complexity 1 43 0 1 1177 6171 99 49 6 chr13 77637751 77639421 -42644891 + L1VL2 LINE L1 73 1826 -1789 1 1177 291 297 0 42 chr13 77639558 77639653 -42644659 - PB1D10 SINE Alu 0 117 27 1 1177 26 74 0 0 chr13 77640304 77640358 -42643954 + AT_rich Low_complexity Low_complexity 1 54 0 1 1177 315 0 0 0 chr13 77641294 77641329 -42642983 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1177 5227 75 3 1 chr13 77642387 77643083 -42641229 - L1_Mus3 LINE L1 -8 6630 5934 1 1177 477 0 0 0 chr13 77643278 77643331 -42640981 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1177 445 368 92 10 chr13 77643376 77643571 -42640741 + B3A SINE B2 6 216 0 1 1177 997 278 81 40 chr13 77643579 77643901 -42640411 - MTE2b LTR MaLR -44 335 1 1 1177 383 232 32 97 chr13 77643978 77644102 -42640210 - B4A SINE B4 0 292 177 1 1177 5453 157 26 106 chr13 77645016 77646814 -42637498 - L1_Mus3 LINE L1 -632 5251 3789 1 1177 7471 104 12 1 chr13 77646817 77648167 -42636145 + L1_Mus3 LINE L1 5271 6637 -1 1 1177 1460 88 26 44 chr13 77648314 77648541 -42635771 + L1_Mus1 LINE L1 6339 6561 -6 1 1177 204 125 0 0 chr13 77648595 77648627 -42635685 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1177 327 49 0 0 chr13 77648664 77648705 -42635607 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1 1177 2663 82 0 0 chr13 77649321 77649664 -42634648 - L1_Mus1 LINE L1 -295 6272 5930 1 1177 1892 66 42 8 chr13 77649664 77649925 -42634387 + L1_Mus1 LINE L1 6298 6567 0 1 1177 867 262 23 37 chr13 77650092 77650306 -42634006 + B3 SINE B2 6 216 0 1 1177 826 311 49 58 chr13 77650496 77650621 -42633691 + L1MA5A LINE L1 5387 5515 -782 1 1177 4613 74 116 35 chr13 77650621 77651336 -42632976 - L1_Mus3 LINE L1 0 6638 5866 1 1177 826 311 49 58 chr13 77651336 77651759 -42632553 + L1MA5A LINE L1 5516 5930 -367 1 1177 261 276 39 13 chr13 77652112 77652189 -42632123 + ID4 SINE ID 2 80 -3 1 1177 516 273 159 31 chr13 77653362 77653683 -42630629 - MLT1A0 LTR MaLR 0 365 4 1 1177 27 29 0 0 chr13 77655418 77655452 -42628860 + AT_rich Low_complexity Low_complexity 1 34 0 1 1177 440 312 9 0 chr13 77655740 77655849 -42628463 + PB1D10 SINE Alu 3 112 -5 1 1177 249 33 0 0 chr13 77656124 77656154 -42628158 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1 1177 1325 174 95 0 chr13 77656462 77656704 -42627608 + ORR1B1 LTR MaLR 1 265 -129 1 1177 22 35 0 0 chr13 77656714 77656743 -42627569 + AT_rich Low_complexity Low_complexity 1 29 0 1 1177 21 36 0 0 chr13 77656815 77656843 -42627469 + AT_rich Low_complexity Low_complexity 1 28 0 1 1177 306 310 46 72 chr13 77657725 77657878 -42626434 - B1F2 SINE Alu 0 149 1 1 1177 3289 165 39 39 chr13 77658419 77659030 -42625282 - RMER19C LTR ERVK 0 611 1 1 1177 199 99 82 27 chr13 77659279 77659352 -42624960 + (GTTTG)n Simple_repeat Simple_repeat 1 77 0 1 1177 314 184 13 0 chr13 77659539 77659615 -42624697 + CT-rich Low_complexity Low_complexity 4 80 0 1 1177 1087 103 11 11 chr13 77659633 77659810 -42624502 + (TTTC)n Simple_repeat Simple_repeat 2 178 0 1 1177 628 261 83 48 chr13 77660260 77660489 -42623823 - Lx8 LINE L1 -351 7122 6886 1 1177 1454 217 18 0 chr13 77660505 77660781 -42623531 - Lx6 LINE L1 -5 7455 7175 1 1177 1083 240 135 15 chr13 77660785 77661119 -42623193 + Lx6 LINE L1 7056 7429 -31 1 1177 2551 209 83 4 chr13 77661128 77661555 -42622757 - Lx6 LINE L1 -233 7463 6763 1 1177 432 0 0 0 chr13 77661555 77661603 -42622709 + (TC)n Simple_repeat Simple_repeat 1 48 0 1 1177 624 106 0 0 chr13 77661603 77661696 -42622616 + (CA)n Simple_repeat Simple_repeat 1 94 0 1 1177 2551 209 84 4 chr13 77661696 77661811 -42622501 - Lx6 LINE L1 -698 6762 6618 1 1177 1717 156 10 7 chr13 77661817 77662126 -42622186 + L1_Mur3 LINE L1 2473 2782 -3098 1 1177 21 0 0 0 chr13 77662670 77662691 -42621621 + AT_rich Low_complexity Low_complexity 1 21 0 1 1177 1430 200 65 46 chr13 77664491 77664858 -42619454 - ORR1D1 LTR MaLR 0 374 1 1 1177 406 305 54 8 chr13 77665411 77665540 -42618772 + RSINE1 SINE B4 20 154 -11 1 1177 221 318 62 5 chr13 77665834 77665959 -42618353 + MIRb SINE MIR 124 260 -2 1 1177 409 302 85 26 chr13 77666014 77666167 -42618145 + LTR40a LTR ERVL 67 228 -291 1 1177 233 269 152 0 chr13 77666458 77666603 -42617709 - Charlie14a DNA MER1_type -604 560 394 1 1177 1930 87 0 0 chr13 77666887 77667139 -42617173 + L1Md_F2 LINE L1 5990 6241 -341 1 1177 214 338 106 44 chr13 77669821 77670047 -42614265 + L2c LINE L2 2954 3193 -194 1 1177 441 0 0 0 chr13 77670055 77670104 -42614208 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1177 414 257 0 0 chr13 77670416 77670591 -42613721 + (TG)n Simple_repeat Simple_repeat 1 175 0 1 1177 380 288 108 85 chr13 77672381 77672510 -42611802 + RSINE1 SINE B4 3 134 -31 1 1177 778 252 235 0 chr13 77672677 77672906 -42611406 + B4A SINE B4 2 284 -8 1 1177 336 330 87 48 chr13 77673144 77673351 -42610961 + HAL1b LINE L1 935 1149 -860 1 1177 345 138 0 31 chr13 77673456 77673553 -42610759 + (TA)n Simple_repeat Simple_repeat 2 95 0 1 1177 397 148 25 0 chr13 77673668 77673749 -42610563 + GA-rich Low_complexity Low_complexity 1 83 0 1 1177 546 256 48 66 chr13 77675304 77675471 -42608841 + RSINE1 SINE B4 2 165 0 2 1177 2966 113 11 2 chr13 77675790 77676240 -42608072 - Lx2 LINE L1 0 6997 6544 2 1177 4181 92 34 2 chr13 77676375 77676966 -42607346 - L1_Mus3 LINE L1 -5 6633 6024 2 1177 33841 34 0 0 chr13 77677090 77682749 -42601563 + L1Md_T LINE L1 1 5589 -297 2 1177 9019 6 0 0 chr13 77682749 77683745 -42600567 + L1Md_T LINE L1 5590 6585 0 2 1177 454 206 114 12 chr13 77684218 77684385 -42599927 - Lx9 LINE L1 -1 7643 7460 2 1177 444 273 75 48 chr13 77684684 77684830 -42599482 + RSINE1 SINE B4 16 165 0 2 1177 207 261 0 0 chr13 77684833 77684879 -42599433 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1177 359 271 179 73 chr13 77685761 77685940 -42598372 - B3A SINE B2 0 198 1 2 1177 524 117 0 26 chr13 77688711 77688825 -42595487 + (T)n Simple_repeat Simple_repeat 1 111 0 2 1177 1188 68 0 0 chr13 77688825 77688972 -42595340 - B1_Mm SINE Alu 0 147 1 2 1177 578 27 27 0 chr13 77689017 77689092 -42595220 + (TTTTC)n Simple_repeat Simple_repeat 1 77 0 2 1177 373 288 135 9 chr13 77689122 77689675 -42594637 + L1ME1 LINE L1 3840 4466 -1680 2 1177 909 251 9 5 chr13 77689680 77689892 -42594420 + B3 SINE B2 2 214 -2 2 1177 559 227 34 41 chr13 77689922 77690069 -42594243 + B1_Mur2 SINE Alu 2 147 -2 2 1177 3334 77 16 47 chr13 77690095 77690585 -42593727 + MT2C_Mm LTR ERVL 1 475 0 2 1177 1172 62 0 0 chr13 77690877 77691023 -42593289 - B1_Mus1 SINE Alu 0 148 3 2 1177 361 307 25 42 chr13 77691112 77691231 -42593081 + B1F SINE Alu 25 141 -8 2 1177 308 281 16 0 chr13 77691249 77691313 -42592999 + ID4_ SINE ID 8 72 -11 2 1177 218 186 0 0 chr13 77691317 77691360 -42592952 + GA-rich Low_complexity Low_complexity 2 44 0 2 1177 337 235 42 34 chr13 77691562 77691681 -42592631 + L1ME1 LINE L1 5851 5970 -209 2 1177 494 129 12 0 chr13 77691975 77692060 -42592252 + (TC)n Simple_repeat Simple_repeat 2 87 0 2 1177 3426 113 12 0 chr13 77692064 77692560 -42591752 - Lx2 LINE L1 -7 6990 6489 2 1177 261 139 0 0 chr13 77692597 77692640 -42591672 + (T)n Simple_repeat Simple_repeat 1 43 0 2 1177 4063 66 0 0 chr13 77693745 77694258 -42590054 - L1_Mus1 LINE L1 -18 6549 6037 2 1177 1362 61 0 0 chr13 77694268 77694449 -42589863 - Lx2 LINE L1 -494 6503 6323 2 1177 3892 141 3 13 chr13 77694450 77695079 -42589233 + L1_Mur1 LINE L1 5167 5796 -90 2 1177 2633 72 3 16 chr13 77695079 77695447 -42588865 + L1_Mus2 LINE L1 6204 6566 0 2 1177 3892 141 3 13 chr13 77695447 77695494 -42588818 + L1_Mur1 LINE L1 5797 5836 -50 2 1177 345 24 0 0 chr13 77696337 77696379 -42587933 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1177 427 300 131 45 chr13 77696730 77697509 -42586803 - L1MC4a LINE L1 -131 7864 6904 2 1177 352 200 13 13 chr13 77697516 77697592 -42586720 - RLTR11A LTR ERVK 0 528 453 2 1177 219 88 0 0 chr13 77697673 77697707 -42586605 + (TCTG)n Simple_repeat Simple_repeat 1 34 0 2 1177 326 330 100 0 chr13 77697707 77697807 -42586505 - RSINE1 SINE B4 -55 110 1 2 1177 7013 50 1 18 chr13 77698139 77699081 -42585231 - L1Md_F2 LINE L1 -12 6570 5645 2 1177 291 214 0 0 chr13 77699188 77699258 -42585054 - L1_Mur1 LINE L1 -6233 749 680 2 1177 36 53 0 0 chr13 77699261 77699318 -42584994 + AT_rich Low_complexity Low_complexity 1 57 0 2 1177 232 178 0 0 chr13 77699376 77699421 -42584891 - L1M4 LINE L1 -344 5834 5790 2 1177 249 387 21 0 chr13 77699528 77699621 -42584691 + B1_Mm SINE Alu 2 96 -51 2 1177 222 296 0 27 chr13 77699621 77699694 -42584618 + GA-rich Low_complexity Low_complexity 2 72 0 2 1177 2398 105 15 27 chr13 77700186 77700587 -42583725 - Lx LINE L1 0 6654 6259 2 1177 2249 123 38 0 chr13 77700587 77700952 -42583360 + L1_Mus4 LINE L1 5227 5605 -278 2 1177 758 94 0 17 chr13 77701093 77701212 -42583100 + L1_Mus4 LINE L1 5593 5709 -927 2 1177 345 252 235 0 chr13 77702161 77702276 -42582036 + B1F SINE Alu 1 142 -7 2 1177 21 0 0 0 chr13 77702279 77702300 -42582012 + AT_rich Low_complexity Low_complexity 1 21 0 2 1177 528 150 18 0 chr13 77702429 77702542 -42581770 - Lx9 LINE L1 -7 7637 7523 2 1177 1495 191 154 0 chr13 77702558 77702856 -42581456 - ORR1C1 LTR MaLR 0 378 35 2 1177 39493 3 0 0 chr13 77702865 77708557 -42575755 - L1Md_A LINE L1 0 6582 891 2 1177 33791 35 1 0 chr13 77708555 77714405 -42569907 + L1Md_Gf LINE L1 1 5589 -297 2 1177 9068 3 0 0 chr13 77714405 77715401 -42568911 + L1Md_T LINE L1 5587 6582 0 2 1177 207 0 0 0 chr13 77715420 77715443 -42568869 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1177 7341 17 2 3 chr13 77715443 77716374 -42567938 - L1Md_A LINE L1 -5819 905 1 2 1177 3343 209 102 6 chr13 77716479 77717382 -42566930 - Lx9 LINE L1 -181 7463 6474 2 1177 1707 134 7 0 chr13 77717380 77717672 -42566640 - L1_Mur3 LINE L1 -1106 4774 4481 2 1177 1806 201 62 60 chr13 77717681 77717990 -42566322 - L1_Rod LINE L1 -2923 2924 2624 2 1177 2098 180 51 24 chr13 77717990 77718400 -42565912 - MTC LTR MaLR 0 421 1 2 1177 1806 201 62 60 chr13 77718400 77718657 -42565655 - L1_Rod LINE L1 -3224 2623 2357 2 1177 521 226 19 9 chr13 77718680 77718869 -42565443 + RLTR33 LTR ERVK 179 453 -225 2 1177 264 122 0 0 chr13 77718917 77718958 -42565354 + (TCC)n Simple_repeat Simple_repeat 3 43 0 2 1177 7195 68 1 10 chr13 77718986 77720167 -42564145 - L1_Mus2 LINE L1 -2 6564 5395 2 1177 1547 214 136 29 chr13 77720165 77720268 -42564044 - L1_Rod LINE L1 -4042 1805 1704 2 1177 939 102 0 0 chr13 77720268 77720405 -42563907 + (TTTC)n Simple_repeat Simple_repeat 2 138 0 2 1177 1037 74 7 7 chr13 77720405 77720536 -42563776 - B1_Mus1 SINE Alu -8 140 9 2 1177 2366 235 101 21 chr13 77720536 77721688 -42562624 - L1_Rod LINE L1 -4144 1703 443 2 1177 227 182 0 52 chr13 77721709 77721767 -42562545 + T-rich Low_complexity Low_complexity 2 56 0 2 1177 223 381 34 0 chr13 77722360 77722478 -42561834 - B1_Mus1 SINE Alu 0 148 27 2 1177 285 29 0 0 chr13 77722630 77722664 -42561648 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1177 254 50 0 24 chr13 77722864 77722905 -42561407 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 2 1177 1023 40 0 0 chr13 77722932 77723058 -42561254 - B1_Mus2 SINE Alu -21 126 1 2 1177 535 222 56 0 chr13 77722945 77723071 -42561241 - B4 SINE B4 -88 204 72 2 1177 234 391 26 19 chr13 77724717 77724871 -42559441 + MLT1G3 LTR MaLR 250 404 -191 2 1178 780 40 0 0 chr13 77725966 77726066 -42558246 + (TG)n Simple_repeat Simple_repeat 1 100 0 2 1178 323 312 94 0 chr13 77726191 77726287 -42558025 - L2b LINE L2 -5 3370 3266 2 1178 37225 34 0 0 chr13 77726458 77731067 -42553245 + L1Md_T LINE L1 926 5589 -297 2 1178 8527 58 0 0 chr13 77731067 77732121 -42552191 + L1Md_T LINE L1 5590 6585 0 2 1178 1260 224 138 46 chr13 77732121 77732249 -42552063 + Lx7 LINE L1 6821 6997 -699 2 1178 629 96 29 0 chr13 77732249 77732353 -42551959 + L1Md_F2 LINE L1 6474 6580 -2 2 1178 1260 270 154 20 chr13 77732353 77732686 -42551626 + Lx7 LINE L1 6998 7351 -345 2 1178 243 0 0 0 chr13 77733472 77733499 -42550813 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1178 227 267 40 13 chr13 77734509 77734585 -42549727 + B1F SINE Alu 65 142 -7 2 1178 382 161 173 0 chr13 77735109 77735190 -42549122 + ID_B1 SINE B4 67 161 -63 2 1178 204 309 20 25 chr13 77735703 77735792 -42548520 + L2b LINE L2 3303 3423 -3 2 1178 982 233 48 0 chr13 77736063 77736269 -42548043 - B3 SINE B2 0 216 1 2 1178 287 319 52 99 chr13 77736376 77736398 -42547914 - B3 SINE B2 -9 207 189 2 1178 450 0 0 0 chr13 77736398 77736448 -42547864 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1178 324 302 37 138 chr13 77736448 77736637 -42547675 - B3A SINE B2 -28 188 6 2 1178 3142 24 0 0 chr13 77737471 77737808 -42546504 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1178 58270 16 6 0 chr13 77737808 77744242 -42540070 - IAPEz-int LTR ERVK 0 6481 8 2 1178 3131 27 0 0 chr13 77744242 77744579 -42539733 - IAPLTR1a_Mm LTR ERVK 0 337 1 2 1178 209 368 15 0 chr13 77745704 77745772 -42538540 - MIR SINE MIR -165 97 29 2 1178 215 284 264 5 chr13 77746033 77746218 -42538094 - MIRb SINE MIR -12 250 28 2 1178 24 32 0 0 chr13 77748094 77748125 -42536187 + AT_rich Low_complexity Low_complexity 1 31 0 2 1178 242 297 31 0 chr13 77748142 77748206 -42536106 - ID4 SINE ID -13 70 5 2 1178 342 0 0 0 chr13 77748222 77748260 -42536052 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1178 696 246 7 40 chr13 77748260 77748408 -42535904 - RSINE1 SINE B4 -21 144 2 2 1178 213 121 0 0 chr13 77748586 77748619 -42535693 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2 1178 1237 55 7 0 chr13 77748624 77748770 -42535542 - B1_Mus1 SINE Alu 0 148 2 2 1178 442 257 0 200 chr13 77748930 77749003 -42535309 + B1F2 SINE Alu 6 66 -83 2 1178 729 259 86 5 chr13 77749003 77749201 -42535111 + B3 SINE B2 1 214 -2 2 1178 442 257 0 200 chr13 77749201 77749307 -42535005 + B1F2 SINE Alu 67 149 0 2 1178 6491 52 1 9 chr13 77749416 77749941 -42534371 - L1_Mus1 LINE L1 0 6567 6048 2 1178 3007 5 5 155 chr13 77749941 77750373 -42533939 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1178 6491 52 1 9 chr13 77750373 77750601 -42533711 - L1_Mus1 LINE L1 -520 6047 5820 2 1178 33 56 0 0 chr13 77750633 77750687 -42533625 + AT_rich Low_complexity Low_complexity 1 54 0 2 1178 1372 83 0 6 chr13 77753100 77753268 -42531044 + L1_Mm LINE L1 5426 5615 -559 2 1178 8770 44 1 2 chr13 77753268 77754265 -42530047 + L1Md_F2 LINE L1 5587 6582 0 2 1178 759 253 0 21 chr13 77754265 77754290 -42530022 + L1_Mm LINE L1 5616 5638 -536 2 1178 1599 50 5 10 chr13 77754371 77754573 -42529739 + L1Md_F2 LINE L1 6382 6582 0 2 1178 731 204 151 16 chr13 77754645 77754899 -42529413 - Lx4B LINE L1 -3 7055 6701 2 1178 760 217 68 0 chr13 77754866 77755073 -42529239 - Lx3C LINE L1 -410 6566 6299 2 1178 3222 29 0 0 chr13 77755078 77755424 -42528888 - ORR1A0 LTR MaLR 0 346 1 2 1178 11594 65 18 2 chr13 77755424 77757012 -42527300 - ORR1A0-int LTR MaLR 0 1792 180 2 1178 13509 68 4 1 chr13 77757023 77759503 -42524809 + L1Md_A LINE L1 441 2925 -2958 2 1178 1650 59 0 0 chr13 77759498 77759702 -42524610 - L1_Mm LINE L1 -540 5343 5140 2 1178 546 111 49 0 chr13 77759691 77759772 -42524540 + L1Md_F2 LINE L1 5498 5582 -301 2 1178 8591 45 3 3 chr13 77759776 77760760 -42523552 + L1Md_F2 LINE L1 5587 6570 -12 2 1178 3492 160 46 10 chr13 77760760 77761730 -42522582 + Lx2B LINE L1 5286 6321 -679 2 1178 2829 39 0 0 chr13 77761730 77762068 -42522244 + ORR1A0 LTR MaLR 1 338 -8 2 1178 1476 60 0 0 chr13 77762077 77762276 -42522036 + ORR1A0-int LTR MaLR 1 199 -1593 2 1178 25959 61 3 4 chr13 77762276 77766303 -42518009 - L1Md_F2 LINE L1 -3 6579 2554 2 1178 4012 176 31 6 chr13 77766343 77767024 -42517288 - RLTR45-int LTR ERVK -210 7196 6499 2 1178 923 314 16 9 chr13 77767058 77767379 -42516933 - RNERVK23-int LTR ERVK -389 7828 7506 3 1178 5727 188 58 88 chr13 77767402 77769279 -42515033 - RLTR45-int LTR ERVK -1337 5907 3539 2 1178 656 232 374 25 chr13 77769314 77769536 -42514776 - ETnERV2-int LTR ERVK -4653 2753 2454 3 1178 455 230 88 0 chr13 77769549 77769662 -42514650 - RMER16-int LTR ERVK -5077 1060 938 3 1178 1396 227 100 78 chr13 77769647 77770165 -42514147 - RMER16-int LTR ERVK -4783 623 241 3 1178 315 288 29 29 chr13 77770392 77770528 -42513784 - RMER16-int LTR ERVK -6940 304 169 3 1178 7043 75 0 7 chr13 77771215 77772438 -42511874 - L1Md_F LINE L1 -4269 1614 392 3 1178 3313 199 39 23 chr13 77772436 77773161 -42511151 - L1Md_F LINE L1 -5494 1025 290 3 1178 532 248 91 82 chr13 77773204 77773322 -42510990 + L1MB2 LINE L1 5787 5895 -273 3 1178 892 246 60 0 chr13 77773322 77773521 -42510791 + B3 SINE B2 1 211 -5 3 1178 629 236 158 47 chr13 77773521 77773761 -42510551 + L1MB2 LINE L1 5896 6157 -17 3 1178 444 201 102 22 chr13 77773943 77774080 -42510232 - ORR1C2 LTR MaLR 0 384 237 3 1178 237 237 153 10 chr13 77774614 77774712 -42509600 - L1_Mur3 LINE L1 -7044 668 557 3 1178 1928 134 252 29 chr13 77774712 77775165 -42509147 - RLTR6_Mm LTR ERV1 -64 590 37 3 1178 258 237 198 40 chr13 77775171 77775272 -42509040 - RLTR6_Mm LTR ERV1 -537 117 1 3 1178 52998 34 22 0 chr13 77775272 77782896 -42501416 - RLTR6-int LTR ERV1 0 7778 1 3 1178 1771 123 269 49 chr13 77782896 77783349 -42500963 - RLTR6_Mm LTR ERV1 -65 589 37 3 1178 262 209 209 0 chr13 77783389 77783456 -42500856 - RLTR6_Mm LTR ERV1 -573 81 1 3 1178 1602 178 32 3 chr13 77783580 77783896 -42500416 + L1_Mur3 LINE L1 2279 2603 -3277 3 1178 1816 150 76 23 chr13 77783966 77784320 -42499992 - RLTR14 LTR ERV1 0 382 10 3 1178 10337 169 44 99 chr13 77784689 77784897 -42499415 + L1_Mur3 LINE L1 2598 2799 -3081 3 1178 4296 110 16 110 chr13 77784897 77785724 -42498588 + RMER17A LTR ERVK 1 749 -2 3 1178 10337 169 44 99 chr13 77785724 77785828 -42498484 + L1_Mur3 LINE L1 2800 2902 -2978 3 1178 2481 131 34 3 chr13 77785828 77786210 -42498102 - ORR1B1 LTR MaLR 0 394 1 3 1178 10337 169 44 99 chr13 77786210 77786676 -42497636 + L1_Mur3 LINE L1 2903 3319 -2561 3 1178 1132 69 0 27 chr13 77786676 77786825 -42497487 + B1_Mus2 SINE Alu 3 147 0 3 1178 10337 169 44 99 chr13 77786825 77788881 -42495431 + L1_Mur3 LINE L1 3320 5279 -601 3 1178 2164 182 30 9 chr13 77788904 77789370 -42494942 - RLTR28 LTR ERVL -48 476 1 3 1178 1104 268 87 92 chr13 77789370 77789966 -42494346 + Lx7 LINE L1 7058 7650 -46 3 1178 343 244 35 71 chr13 77789946 77790087 -42494225 + Lx6 LINE L1 7325 7460 0 3 1178 29 0 0 0 chr13 77790091 77790120 -42494192 + AT_rich Low_complexity Low_complexity 1 29 0 3 1178 883 291 48 3 chr13 77790291 77790601 -42493711 + MTEa LTR MaLR 1 324 -55 3 1178 263 222 0 12 chr13 77790603 77790685 -42493627 + CT-rich Low_complexity Low_complexity 3 83 0 3 1178 338 203 0 0 chr13 77790685 77790749 -42493563 + MTEa LTR MaLR 315 378 -1 3 1178 292 205 66 33 chr13 77790754 77790845 -42493467 - L1MCa LINE L1 -5179 1329 1236 3 1178 985 129 43 11 chr13 77790856 77791044 -42493268 - URR1A DNA MER1_type 0 226 33 3 1178 987 261 191 86 chr13 77791559 77792193 -42492119 + RMER13A LTR ERVK 1 700 -208 3 1178 2967 156 20 77 chr13 77792402 77793155 -42491157 - RMER6A LTR ERVK -1 719 97 3 1178 1010 191 147 40 chr13 77793155 77793455 -42490857 + IAPEY3_LTR LTR ERVK 1 332 0 3 1178 555 136 0 0 chr13 77793465 77793553 -42490759 - RMER6A LTR ERVK -602 88 1 3 1178 824 227 106 4 chr13 77793641 77793867 -42490445 + MTE2b LTR MaLR 127 375 -4 3 1178 2790 152 8 20 chr13 77794005 77794510 -42489802 - L1_Mur2 LINE L1 -910 4967 4469 3 1178 1621 175 14 14 chr13 77794509 77794804 -42489508 + Lx4A LINE L1 5851 6145 -913 3 1178 1474 126 16 4 chr13 77794790 77795037 -42489275 + L1_Mur1 LINE L1 5123 5372 -514 3 1178 3487 84 0 0 chr13 77795037 77795488 -42488824 + L1_Mus2 LINE L1 6116 6566 0 3 1178 21469 125 4 14 chr13 77795513 77797631 -42486681 + L1_Mus3 LINE L1 2551 4639 -1244 3 1178 198 0 0 0 chr13 77797631 77797653 -42486659 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 3 1178 21469 112 21 8 chr13 77797653 77799358 -42484954 + L1_Mus3 LINE L1 4640 6368 -270 3 1178 507 17 0 0 chr13 77799358 77799418 -42484894 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 3 1178 7149 96 43 1 chr13 77799418 77799738 -42484574 + L1_Mus3 LINE L1 6369 6638 0 3 1178 7155 119 33 10 chr13 77799745 77800870 -42483442 + Lx3B LINE L1 5821 6971 -2 3 1178 198 0 0 0 chr13 77800885 77800907 -42483405 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1178 1356 217 29 45 chr13 77800908 77801221 -42483091 + L1VL2 LINE L1 85 392 -5943 3 1178 226 152 0 0 chr13 77801228 77801261 -42483051 + L1VL2 LINE L1 365 397 -5938 3 1178 202 159 0 43 chr13 77801472 77801518 -42482794 + GA-rich Low_complexity Low_complexity 2 45 0 3 1178 646 311 50 48 chr13 77801740 77802159 -42482153 + RLTR14-int LTR ERV1 4898 5317 0 3 1178 724 189 25 80 chr13 77802159 77802360 -42481952 + RLTR14 LTR ERV1 1 190 -192 3 1178 10398 92 38 24 chr13 77802421 77802687 -42481625 + MusHAL1 LINE L1 81 364 -2348 3 1178 210 37 0 0 chr13 77802687 77802714 -42481598 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 3 1178 10398 92 38 24 chr13 77802714 77803655 -42480657 + MusHAL1 LINE L1 365 1326 -1386 3 1178 3242 32 0 0 chr13 77803655 77804031 -42480281 - L1Md_T LINE L1 0 6582 6207 3 1178 10398 92 38 24 chr13 77804031 77804475 -42479837 + MusHAL1 LINE L1 1327 1757 -955 3 1178 6462 176 5 3 chr13 77804460 77805630 -42478682 + L1_Mm LINE L1 4119 5291 -592 3 1178 3748 115 16 12 chr13 77805643 77806205 -42478107 + LTRIS2 LTR ERV1 1 564 0 3 1178 646 191 0 8 chr13 77806207 77806334 -42477978 + Lx3C LINE L1 5955 6080 -896 3 1178 3935 172 50 22 chr13 77806330 77807072 -42477240 + Lx3C LINE L1 6203 6965 -11 3 1178 554 344 102 9 chr13 77807442 77807776 -42476536 + MLT1C LTR MaLR 3 367 -100 3 1178 486 0 0 0 chr13 77807855 77807909 -42476403 + (TG)n Simple_repeat Simple_repeat 2 55 0 3 1178 428 328 0 8 chr13 77807914 77808031 -42476281 - RSINE1 SINE B4 -46 119 4 3 1178 2992 102 26 49 chr13 77808865 77809358 -42474954 + RLTR45 LTR ERVK 1 482 0 3 1178 961 60 0 0 chr13 77809847 77809963 -42474349 + L1_Mus2 LINE L1 6115 6230 -336 3 1178 2167 123 15 6 chr13 77809963 77810297 -42474015 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1178 7125 35 3 16 chr13 77810299 77811160 -42473152 - IAPEz-int LTR ERVK -2 6479 5630 3 1178 24995 42 31 5 chr13 77811146 77814139 -42470173 - IAPEz-int LTR ERVK -3405 3076 8 3 1178 2167 123 15 6 chr13 77814139 77814473 -42469839 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1178 2594 76 3 9 chr13 77814473 77814817 -42469495 + L1_Mus2 LINE L1 6225 6566 0 3 1178 395 271 37 8 chr13 77815012 77815146 -42469166 - L1_Mur2 LINE L1 -6437 275 138 3 1178 235 323 0 0 chr13 77815225 77815321 -42468991 - L2 LINE L2 -745 2674 2579 3 1178 269 247 71 0 chr13 77815351 77815436 -42468876 - MamRep137 DNA TcMar? -348 96 6 3 1178 538 223 92 20 chr13 77816484 77816715 -42467597 + RMER1B Other Other 64 386 -680 3 1178 334 250 26 0 chr13 77816723 77816799 -42467513 + RMER1A Other Other 138 215 -815 3 1178 656 294 33 31 chr13 77817539 77817878 -42466434 - RLTR6-int LTR ERV1 -126 7652 7342 3 1178 186 71 0 0 chr13 77817925 77817953 -42466359 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1178 2826 51 6 11 chr13 77817971 77818331 -42465981 - L1Md_F3 LINE L1 0 6584 6227 3 1178 19513 25 0 0 chr13 77820020 77822918 -42461394 - L1Md_T LINE L1 0 6582 3685 3 1178 3580 323 57 47 chr13 77822918 77825439 -42458873 - MuLV-int LTR ERV1 -2315 5291 2747 3 1178 804 307 90 66 chr13 77825488 77826189 -42458123 - MuLV-int LTR ERV1 -5011 2595 1850 3 1178 432 289 51 39 chr13 77826285 77826578 -42457734 - MuLV-int LTR ERV1 -6329 1449 1081 3 1178 361 324 68 57 chr13 77826837 77827205 -42457107 - MuLV-int LTR ERV1 -6805 801 413 3 1178 948 256 6 127 chr13 77827423 77827790 -42456522 + RMER1A Other Other 209 724 -342 3 1178 648 70 0 0 chr13 77828186 77828272 -42456040 + (TC)n Simple_repeat Simple_repeat 2 87 0 3 1178 2485 133 142 98 chr13 77829082 77829174 -42455138 - RLTR19-int LTR ERVK -1730 4407 4339 3 1178 2642 90 84 0 chr13 77829174 77829541 -42454771 + MTB LTR MaLR 1 398 -2 3 1178 2485 133 142 98 chr13 77829541 77830031 -42454281 - RLTR19-int LTR ERVK -1799 4338 3799 3 1178 1453 138 35 48 chr13 77830052 77830365 -42453947 - RLTR19-int LTR ERVK -2432 3705 3397 3 1178 3133 270 32 25 chr13 77830590 77831592 -42452720 - RMER16-int LTR ERVK -417 4989 3981 3 1178 2232 150 7 42 chr13 77831831 77832235 -42452077 - RMER16-int LTR ERVK -1427 3979 3590 3 1178 220 250 54 18 chr13 77832403 77832570 -42451742 + (TA)n Simple_repeat Simple_repeat 1 173 0 3 1178 361 60 60 0 chr13 77833834 77833901 -42450411 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 3 1178 1231 171 157 23 chr13 77833937 77834236 -42450076 + RMER1B Other Other 719 1057 -9 3 1178 767 191 204 11 chr13 77834283 77834465 -42449847 - MTD LTR MaLR -92 327 109 3 1178 2233 198 116 36 chr13 77834465 77835016 -42449296 - RMER19B LTR ERVK 0 902 308 3 1178 259 289 104 78 chr13 77834910 77835064 -42449248 - MTA_Mm LTR MaLR -215 204 47 3 1178 4433 16 0 0 chr13 77835067 77835560 -42448752 + MT2_Mm LTR ERVL 1 493 0 3 1178 44954 16 10 0 chr13 77835560 77840868 -42443444 + MERVL-int LTR ERVL 1 5360 -125 3 1178 390 167 46 35 chr13 77840868 77840955 -42443357 + ORR1A3-int LTR MaLR 553 640 -1323 3 1178 302 0 0 0 chr13 77840955 77840993 -42443319 + MERVL-int LTR ERVL 5448 5485 0 3 1178 4446 14 0 0 chr13 77840993 77841486 -42442826 + MT2_Mm LTR ERVL 1 493 0 3 1178 266 103 26 0 chr13 77841489 77841528 -42442784 - MTA_Mm LTR MaLR -352 44 5 3 1178 8291 98 1 1 chr13 77841872 77843841 -42440471 + L1_Mus1 LINE L1 4599 6567 0 3 1178 7114 120 53 35 chr13 77843853 77845725 -42438587 + L1_Mus2 LINE L1 4669 6565 -1 3 1178 3935 148 4 1 chr13 77845747 77846450 -42437862 + L1_Mur2 LINE L1 4003 4707 -1170 3 1178 408 267 166 28 chr13 77846566 77846747 -42437565 - B3 SINE B2 -10 206 1 3 1178 292 244 101 51 chr13 77847100 77847238 -42437074 - L2a LINE L2 0 3426 3282 3 1178 199 369 60 0 chr13 77849160 77849244 -42435068 - L2b LINE L2 0 3375 3287 3 1178 294 50 0 0 chr13 77849803 77849843 -42434469 + (CAA)n Simple_repeat Simple_repeat 3 42 0 3 1178 1275 268 55 13 chr13 77849871 77850340 -42433972 - L1MB3 LINE L1 -86 6097 5609 3 1178 386 242 19 9 chr13 77850724 77850845 -42433467 - L1M4 LINE L1 -560 5614 5493 3 1178 1151 82 0 0 chr13 77850884 77851031 -42433281 - B1_Mus2 SINE Alu 0 147 1 3 1178 295 273 11 0 chr13 77851083 77851171 -42433141 - L1M4 LINE L1 -734 5437 5349 3 1178 293 289 53 80 chr13 77851171 77851284 -42433028 - PB1D10 SINE Alu -7 110 1 3 1178 310 261 14 0 chr13 77851300 77851369 -42432943 - ID4_ SINE ID -10 73 4 3 1178 740 205 16 8 chr13 77852218 77852346 -42431966 - B1_Mur1 SINE Alu -13 136 8 3 1178 229 314 26 115 chr13 77852346 77852409 -42431903 + YREP_Mm Unknown Unknown 190 363 -1449 3 1178 22449 125 58 41 chr13 77852800 77854522 -42429790 - Lx4A LINE L1 -72 6986 5144 3 1178 1223 41 0 7 chr13 77854522 77854671 -42429641 - B1_Mus1 SINE Alu 0 148 1 3 147 22449 115 52 88 chr13 77854671 77857994 -42426318 - Lx4A LINE L1 -734 5143 2073 3 1179 249 33 0 0 chr13 77857994 77858024 -42426288 + (TGG)n Simple_repeat Simple_repeat 1 30 0 3 1179 378 0 0 0 chr13 77858026 77858068 -42426244 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1179 22449 112 40 54 chr13 77858068 77859210 -42425102 - Lx4A LINE L1 -3805 2072 892 3 1179 353 342 72 0 chr13 77859396 77859507 -42424805 + RSINE1 SINE B4 45 163 -2 3 1179 1470 60 5 0 chr13 77860164 77860349 -42423963 + B2_Mm1a SINE B2 1 186 -7 3 1179 236 177 32 0 chr13 77860466 77860528 -42423784 + CT-rich Low_complexity Low_complexity 1 64 0 3 1179 226 247 98 12 chr13 77860536 77860618 -42423694 - B1F SINE Alu -2 147 59 3 1179 465 217 261 28 chr13 77860625 77860805 -42423507 - ID_B1 SINE B4 -2 222 1 3 1179 21 0 0 0 chr13 77860814 77860835 -42423477 + AT_rich Low_complexity Low_complexity 1 21 0 3 1179 482 216 59 15 chr13 77860835 77860971 -42423341 - Lx6 LINE L1 -26 7434 7293 4 1179 868 279 8 31 chr13 77861031 77861290 -42423022 + MLT-int LTR MaLR 1483 1735 0 4 1179 292 246 16 0 chr13 77861597 77861719 -42422593 + (TG)n Simple_repeat Simple_repeat 1 124 0 4 1179 653 259 41 101 chr13 77862013 77862232 -42422080 - B3A SINE B2 0 216 11 4 1179 670 214 234 0 chr13 77863060 77863261 -42421051 - MLT1F1 LTR MaLR -7 562 315 4 1179 566 209 0 7 chr13 77863357 77863492 -42420820 + GA-rich Low_complexity Low_complexity 2 135 0 4 1179 2960 37 1 10 chr13 77863504 77863893 -42420419 + MT-int LTR MaLR 669 1366 -426 4 1179 2990 21 0 0 chr13 77863932 77864269 -42420043 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 1179 379 313 0 0 chr13 77864387 77864486 -42419826 - MLT1F1-int LTR MaLR -108 1381 1283 4 1179 481 343 21 29 chr13 77864530 77864773 -42419539 - MER74B LTR ERVL -70 552 312 4 1179 213 139 0 0 chr13 77864790 77864833 -42419479 + (TGAG)n Simple_repeat Simple_repeat 4 46 0 4 1179 234 281 60 40 chr13 77864849 77864949 -42419363 - MLT1F1-int LTR MaLR -486 1003 902 4 1179 703 268 25 29 chr13 77865198 77865402 -42418910 - B4A SINE B4 -88 204 2 4 1179 5421 57 0 28 chr13 77865596 77866306 -42418006 + L1_Mus1 LINE L1 5877 6566 -1 4 1179 249 329 0 99 chr13 77866349 77866440 -42417872 - RSINE1 SINE B4 0 165 84 4 1179 720 174 45 0 chr13 77866455 77866587 -42417725 - B1_Mus2 SINE Alu -1 146 9 4 1179 404 194 20 79 chr13 77866498 77866599 -42417713 - MT2B LTR ERVL -343 258 164 4 1179 225 272 56 46 chr13 77866803 77866911 -42417401 - L1MC1 LINE L1 -2 6331 6223 4 1179 12209 159 47 12 chr13 77867070 77869624 -42414688 - Lx6 LINE L1 -1538 5922 3275 4 1179 3799 191 36 15 chr13 77869654 77870242 -42414070 - Lx6 LINE L1 -3204 2676 2091 4 1179 248 0 0 30 chr13 77870242 77870275 -42414037 + (TTG)n Simple_repeat Simple_repeat 1 32 0 4 1179 3799 191 36 15 chr13 77870275 77870569 -42413743 - Lx6 LINE L1 -3790 2090 1776 4 1179 297 236 73 67 chr13 77870831 77871003 -42413309 - L1_Rod LINE L1 -1609 4268 4073 4 1179 34 84 0 0 chr13 77871723 77871806 -42412506 + AT_rich Low_complexity Low_complexity 1 83 0 4 1179 235 294 15 0 chr13 77872117 77872185 -42412127 + ID4_ SINE ID 4 72 -11 4 1179 489 17 0 0 chr13 77872226 77872284 -42412028 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1179 213 94 0 0 chr13 77872286 77872318 -42411994 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 4 1179 2193 181 31 26 chr13 77872452 77872530 -42411782 + MTC LTR MaLR 1 82 -339 4 1179 630 74 0 61 chr13 77872530 77872645 -42411667 + Lx LINE L1 6547 6654 0 4 1179 2193 181 31 26 chr13 77872645 77872985 -42411327 + MTC LTR MaLR 83 420 -1 4 1179 2174 58 0 0 chr13 77873070 77873348 -42410964 + L1_Mus1 LINE L1 6082 6359 -208 4 1179 377 233 87 81 chr13 77873348 77873521 -42410791 - Lx9 LINE L1 -479 7165 6992 4 1179 302 365 86 47 chr13 77873658 77873937 -42410375 - LTR16B1 LTR ERVL -165 315 26 4 1179 652 246 18 23 chr13 77875071 77875242 -42409070 + MTD LTR MaLR 38 207 -212 4 1179 2965 210 28 2 chr13 77875244 77875858 -42408454 - Lx7 LINE L1 -713 6983 6354 4 1179 1461 183 92 6 chr13 77875854 77876179 -42408133 + Lx7 LINE L1 7002 7354 -342 4 1179 728 22 11 0 chr13 77876180 77876270 -42408042 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 4 1179 21 36 0 0 chr13 77876822 77876850 -42407462 + AT_rich Low_complexity Low_complexity 1 28 0 4 1179 1210 191 17 58 chr13 77876863 77877207 -42407105 + Lx7 LINE L1 7360 7689 -7 4 1179 267 103 0 0 chr13 77877207 77877246 -42407066 + (TAA)n Simple_repeat Simple_repeat 2 40 0 4 1179 829 219 62 0 chr13 77877251 77877429 -42406883 + MTD LTR MaLR 231 419 0 4 1179 351 315 27 0 chr13 77877662 77877773 -42406539 - PB1D10 SINE Alu -2 115 2 4 1179 2029 198 54 27 chr13 77877991 77878133 -42406179 + MTC LTR MaLR 1 138 -283 4 1179 1097 221 121 66 chr13 77878133 77878497 -42405815 - ORR1C2 LTR MaLR 0 384 1 4 1179 2029 198 54 27 chr13 77878497 77878764 -42405548 + MTC LTR MaLR 139 421 0 4 1179 202 350 97 29 chr13 77879046 77879149 -42405163 + L2b LINE L2 3196 3305 -70 4 1179 2385 119 10 3 chr13 77879592 77879981 -42404331 - L1_Mur1 LINE L1 -341 5545 5154 4 1179 1511 128 196 11 chr13 77880073 77880349 -42403963 - ORR1A2 LTR MaLR 0 327 1 4 1179 224 284 112 31 chr13 77880372 77880470 -42403842 - MIRb SINE MIR -77 191 86 4 1179 241 264 141 55 chr13 77880517 77880645 -42403667 - MIRb SINE MIR -8 260 122 4 1179 475 146 118 0 chr13 77880832 77880942 -42403370 - Lx9 LINE L1 -259 7385 7263 4 1179 336 336 28 0 chr13 77881084 77881191 -42403121 - PB1D10 SINE Alu -7 110 1 4 1179 232 204 0 0 chr13 77881654 77881698 -42402614 + PB1D10 SINE Alu 46 89 -28 4 1179 285 290 44 61 chr13 77882874 77882988 -42401324 + MTEb LTR MaLR 248 359 -20 4 1179 14626 29 0 0 chr13 77883066 77885534 -42398778 - L1Md_T LINE L1 0 6582 4115 4 1179 235 316 187 0 chr13 77885762 77885917 -42398395 - L2 LINE L2 -1064 2355 2172 4 1179 199 296 174 65 chr13 77886127 77886282 -42398030 + MIR SINE MIR 3 174 -88 4 1179 907 281 23 50 chr13 77886314 77886793 -42397519 + Tigger2b DNA MER2_type 1 466 -260 4 1179 638 348 57 0 chr13 77887450 77887660 -42396652 - B4A SINE B4 -2 290 69 4 1179 1828 86 4 0 chr13 77887660 77887917 -42396395 - L1_Mm LINE L1 -337 5546 5289 4 1179 1947 91 63 3 chr13 77887920 77888206 -42396106 - RMER17A2 LTR ERVK -603 303 1 4 1179 3752 146 3 31 chr13 77888206 77888457 -42395855 - L1_Mur2 LINE L1 -2081 3796 3549 4 1179 185 0 40 0 chr13 77888457 77888482 -42395830 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1179 1138 58 0 0 chr13 77888482 77888619 -42395693 - B1_Mus2 SINE Alu -9 138 2 4 1179 3752 146 3 31 chr13 77888619 77889113 -42395199 - L1_Mur2 LINE L1 -2329 3548 3072 4 1179 315 0 0 0 chr13 77889117 77889152 -42395160 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1179 724 264 222 117 chr13 77889160 77889512 -42394800 - RMER13B LTR ERVK -117 841 384 4 1179 281 241 58 46 chr13 77889526 77889613 -42394699 - ID_B1 SINE B4 0 224 137 4 1179 229 200 0 0 chr13 77889595 77889635 -42394677 - U2 snRNA snRNA -148 40 1 4 1179 273 252 70 56 chr13 77889740 77889883 -42394429 - B1F1 SINE Alu -3 146 2 4 1179 374 121 0 15 chr13 77889975 77890042 -42394270 + (TAA)n Simple_repeat Simple_repeat 2 67 0 4 1179 302 368 48 21 chr13 77890511 77890700 -42393612 - Lx8 LINE L1 -220 7253 7060 4 1179 315 320 26 39 chr13 77890917 77891070 -42393242 + RSINE1 SINE B4 4 154 -11 4 1179 226 263 175 21 chr13 77891297 77891394 -42392918 + B3 SINE B2 97 208 -8 4 1179 252 0 0 0 chr13 77891412 77891440 -42392872 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1179 953 122 0 51 chr13 77891454 77891610 -42392702 - B1_Mus1 SINE Alu 0 148 1 4 1179 675 12 0 0 chr13 77891631 77891714 -42392598 + B1_Mus1 SINE Alu 5 87 -61 4 1179 396 0 0 0 chr13 77892138 77892182 -42392130 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1179 375 194 0 0 chr13 77892182 77892254 -42392058 - Lx9 LINE L1 -169 7475 7404 4 1179 949 262 29 7 chr13 77892267 77892540 -42391772 + Lx9 LINE L1 7074 7352 -292 4 1179 358 250 30 15 chr13 77893123 77893257 -42391055 - L1M4 LINE L1 -2300 3846 3711 4 1179 206 79 0 50 chr13 77893373 77893413 -42390899 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 4 1179 1202 203 126 17 chr13 77893738 77894046 -42390266 - ORR1D1 LTR MaLR 0 374 38 4 1179 1862 182 31 29 chr13 77894076 77894427 -42389885 - ORR1D1 LTR MaLR -8 359 8 4 1179 1843 216 0 22 chr13 77894428 77894787 -42389525 - ORR1D1-int LTR MaLR -1019 351 1 4 1179 279 164 0 0 chr13 77894927 77894988 -42389324 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1179 1912 209 34 0 chr13 77895033 77895391 -42388921 - ORR1D1 LTR MaLR -4 370 1 4 1179 240 306 11 34 chr13 77895460 77895548 -42388764 + Tigger5 DNA MER2_type 45 130 -2276 4 1179 258 264 34 22 chr13 77895619 77895708 -42388604 + RLTR42-int LTR ERVK 1228 1317 -4205 4 1179 1423 244 76 11 chr13 77895966 77896402 -42387910 - Lx9 LINE L1 -349 7295 6832 4 1179 436 195 70 31 chr13 77896402 77896656 -42387656 + Lx9 LINE L1 7336 7644 0 4 1179 275 279 99 30 chr13 77896748 77897010 -42387302 - L1MD LINE L1 -3539 2607 2328 4 1179 289 276 0 0 chr13 77897062 77897120 -42387192 - PB1D10 SINE Alu -23 94 37 4 1179 592 318 79 91 chr13 77897177 77897853 -42386459 + L1MC3 LINE L1 6781 7644 -351 4 1179 342 248 35 9 chr13 77897879 77897993 -42386319 + L1MC3 LINE L1 7865 7981 -14 4 1179 545 168 95 26 chr13 77898039 77898155 -42386157 - B1_Mur3 SINE Alu -2 147 24 4 1179 3936 78 29 4 chr13 77899129 77899681 -42384631 + L1_Mus3 LINE L1 6067 6632 -6 4 1179 24 77 0 0 chr13 77899962 77900014 -42384298 + AT_rich Low_complexity Low_complexity 1 52 0 4 1179 998 308 120 28 chr13 77900020 77900552 -42383760 + LTR80A LTR ERVL 1 581 -2 4 1179 472 338 90 45 chr13 77901914 77902202 -42382110 + LTR40a LTR ERVL 8 308 -211 4 1179 464 186 32 0 chr13 77902264 77902388 -42381924 - Lx9 LINE L1 -8 7636 7509 4 1179 489 34 0 0 chr13 77902462 77902521 -42381791 + (TC)n Simple_repeat Simple_repeat 1 59 0 4 1179 906 58 108 0 chr13 77902522 77902642 -42381670 - B1_Mus1 SINE Alu -13 135 3 4 1179 403 233 86 43 chr13 77902839 77902978 -42381334 - B1F SINE Alu -3 146 2 4 1179 620 240 66 0 chr13 77903025 77903146 -42381166 + RSINE1 SINE B4 4 132 -33 4 1179 297 0 0 0 chr13 77903156 77903189 -42381123 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1179 478 310 23 0 chr13 77903858 77903987 -42380325 - B3 SINE B2 -14 202 71 4 1179 4038 70 6 2 chr13 77904197 77904724 -42379588 - L1_Mus3 LINE L1 -4 6634 6106 4 1179 207 0 0 0 chr13 77905511 77905534 -42378778 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 4 1179 1134 75 14 0 chr13 77905543 77905689 -42378623 - B1_Mus1 SINE Alu 0 148 1 4 1179 792 169 213 0 chr13 77906524 77906707 -42377605 + URR1A DNA MER1_type 5 226 0 4 1179 278 305 21 0 chr13 77906718 77906813 -42377499 + L1MC5 LINE L1 6735 6831 -1130 4 1179 5470 113 18 24 chr13 77907217 77908920 -42375392 + L1VL4 LINE L1 1 1689 -1870 4 1179 6921 100 11 4 chr13 77908919 77910154 -42374158 + L1_Mus4 LINE L1 5390 6632 -4 4 1179 483 359 81 4 chr13 77910221 77910467 -42373845 + MLT1E2 LTR MaLR 222 486 -141 4 1179 933 35 0 0 chr13 77910522 77910635 -42373677 + (TC)n Simple_repeat Simple_repeat 1 113 0 5 1179 518 255 10 0 chr13 77910675 77910777 -42373535 - B4A SINE B4 -18 274 172 5 1179 318 279 13 0 chr13 77911251 77911330 -42372982 + PB1D10 SINE Alu 32 111 -6 5 1179 5042 18 0 0 chr13 77912040 77912653 -42371659 + L1Md_T LINE L1 4974 5586 -297 5 1179 8349 39 0 0 chr13 77912653 77913648 -42370664 + L1Md_T LINE L1 5587 6581 -1 5 1179 228 35 0 0 chr13 77913651 77913680 -42370632 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1179 228 172 0 0 chr13 77913678 77913736 -42370576 + A-rich Low_complexity Low_complexity 1 58 0 5 1179 245 128 21 0 chr13 77913899 77913946 -42370366 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 1179 516 32 0 0 chr13 77913946 77914008 -42370304 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1179 399 138 0 0 chr13 77914009 77914074 -42370238 - RLTR11A LTR ERVK -80 448 384 5 1179 264 234 31 15 chr13 77914067 77914132 -42370180 + B1F SINE Alu 77 142 -7 5 1179 477 269 116 24 chr13 77914308 77914507 -42369805 + LTR40a LTR ERVL 252 507 -12 5 1179 250 26 51 0 chr13 77914538 77914577 -42369735 + (TTTTTA)n Simple_repeat Simple_repeat 3 43 0 5 1179 400 301 96 73 chr13 77914890 77915250 -42369062 + MLT1A LTR MaLR 1 362 -28 5 1179 1842 194 32 16 chr13 77915694 77916066 -42368246 + MTC LTR MaLR 44 421 0 5 1179 327 324 183 47 chr13 77916434 77916751 -42367561 + ORR1E LTR MaLR 11 370 0 5 1179 3482 89 13 0 chr13 77917136 77917674 -42366638 - MusHAL1 LINE L1 -373 2339 1795 5 1179 6823 114 66 29 chr13 77918636 77919646 -42364666 - Lx3C LINE L1 -150 6826 5789 5 1179 4838 53 2 3 chr13 77919646 77920251 -42364061 - L1Md_F2 LINE L1 -12 6570 5967 5 1179 6823 122 74 67 chr13 77920251 77920706 -42363606 - Lx3C LINE L1 -95 5791 5298 5 1179 1124 82 7 0 chr13 77920706 77920852 -42363460 - B1_Mus2 SINE Alu 0 147 1 5 1179 2860 128 79 93 chr13 77920852 77920912 -42363400 - Lx3C LINE L1 -589 5297 5252 5 1179 432 130 0 0 chr13 77920916 77920985 -42363327 + (CA)n Simple_repeat Simple_repeat 2 70 0 5 1179 279 106 21 0 chr13 77920994 77921041 -42363271 - Lx3C LINE L1 -669 5217 5170 5 1179 2645 169 107 63 chr13 77921298 77921720 -42362592 - L1_Mm LINE L1 -168 5715 5229 5 1179 4422 16 0 0 chr13 77921720 77922213 -42362099 - MT2_Mm LTR ERVL 0 493 1 5 1179 2645 169 107 63 chr13 77922213 77922362 -42361950 - L1_Mm LINE L1 -655 5228 5114 5 1179 1140 82 0 0 chr13 77922362 77922508 -42361804 - B1_Mus2 SINE Alu 0 147 2 5 1179 2645 169 107 63 chr13 77922508 77922590 -42361722 - L1_Mm LINE L1 -770 5113 5032 5 1179 363 77 0 0 chr13 77922590 77922642 -42361670 + L1_Mus4 LINE L1 5791 5842 -794 5 1179 389 171 24 0 chr13 77922884 77922966 -42361346 + CT-rich Low_complexity Low_complexity 2 85 0 5 1179 1383 276 112 67 chr13 77923128 77923742 -42360570 + RLTR26 LTR ERVK 1 642 0 5 1179 299 197 45 15 chr13 77923965 77924032 -42360280 - ORR1E LTR MaLR -290 69 1 5 1179 213 388 0 0 chr13 77924765 77924850 -42359462 + B2_Mm2 SINE B2 1 85 -110 5 1179 5997 132 51 5 chr13 77924965 77926666 -42357646 - Lx LINE L1 -1 6653 4892 5 1179 532 90 0 50 chr13 77926655 77926767 -42357545 - Lx LINE L1 -2531 3355 3240 5 1179 32703 74 1 1 chr13 77926804 77932339 -42351973 - L1Md_F2 LINE L1 -1 6581 1049 5 1179 36894 50 2 9 chr13 77932339 77938871 -42345441 - L1Md_T LINE L1 0 6582 114 5 1179 207 0 0 0 chr13 77938891 77938914 -42345398 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1179 3305 11 0 0 chr13 77938936 77939309 -42345003 - L1Md_T LINE L1 0 6582 6210 5 1179 408 122 37 0 chr13 77939452 77939534 -42344778 + (TA)n Simple_repeat Simple_repeat 2 86 0 5 1179 788 160 201 11 chr13 77939923 77940112 -42344200 - URR1A DNA MER1_type -1 225 1 5 1179 443 384 0 15 chr13 77940836 77940971 -42343341 - RSINE1 SINE B4 -31 134 2 5 1179 244 221 88 38 chr13 77940979 77941059 -42343253 + L1MEg LINE L1 1172 1255 -4987 5 1179 2217 326 37 30 chr13 77941110 77942232 -42342080 - Lx8 LINE L1 -118 7355 6226 5 1179 2024 215 9 49 chr13 77942238 77942668 -42341644 - MTC LTR MaLR -8 413 1 5 1179 1368 240 96 11 chr13 77942750 77943125 -42341187 - MTD LTR MaLR 0 419 13 5 1179 895 192 41 119 chr13 77943179 77943522 -42340790 - RLTRETN_Mm LTR ERVK 0 322 7 5 1179 216 321 0 0 chr13 77943679 77943732 -42340580 + (CATG)n Simple_repeat Simple_repeat 2 54 0 5 1179 491 317 11 51 chr13 77943749 77943925 -42340387 - B4A SINE B4 -12 280 112 5 1179 385 319 47 64 chr13 77943957 77944128 -42340184 - B4A SINE B4 -124 168 1 5 1179 614 328 128 8 chr13 77944630 77944888 -42339424 + B4A SINE B4 1 289 -3 5 1179 355 213 0 51 chr13 77945142 77945221 -42339091 - B3 SINE B2 -136 80 6 5 1179 3528 74 14 2 chr13 77945229 77945731 -42338581 + MusHAL1 LINE L1 535 1042 -1670 5 1179 6429 139 16 13 chr13 77945729 77947167 -42337145 + Lx LINE L1 5192 6634 -20 5 1179 204 40 0 0 chr13 77947174 77947199 -42337113 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 5 1179 625 247 12 0 chr13 77947310 77947476 -42336836 + L1MEg LINE L1 2968 3135 -3011 5 1179 654 335 89 12 chr13 77947504 77947752 -42336560 + B4A SINE B4 26 292 0 5 1179 334 306 77 47 chr13 77947953 77948186 -42336126 + L1MEg LINE L1 3322 3561 -2585 5 1179 4014 60 28 0 chr13 77948252 77948750 -42335562 - RLTR1B LTR ERV1 0 512 1 5 1179 526 165 0 44 chr13 77949098 77949212 -42335100 - Lx LINE L1 -6 6648 6540 5 1179 2191 169 5 8 chr13 77949212 77949606 -42334706 + L1_Mm LINE L1 5182 5574 -309 5 1179 245 117 0 104 chr13 77949594 77949626 -42334686 + Lx LINE L1 6595 6626 -28 5 1179 2085 160 7 47 chr13 77949626 77950052 -42334260 - RLTR9E LTR ERVK 0 409 1 5 1179 245 117 0 104 chr13 77950052 77950086 -42334226 + Lx LINE L1 6627 6654 0 5 1179 396 285 276 25 chr13 77950164 77950513 -42333799 + Lx8 LINE L1 7028 7464 -9 5 1179 427 329 142 26 chr13 77950587 77951164 -42333148 - L1MD1 LINE L1 -7 6235 5592 5 1179 318 26 0 0 chr13 77951245 77951284 -42333028 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 5 1179 9678 112 14 3 chr13 77951620 77953289 -42331023 - Lx2A1 LINE L1 -11 6997 5313 5 1179 2585 154 95 0 chr13 77953291 77953784 -42330528 - Lx2A1 LINE L1 -2953 2933 2394 5 1179 1570 51 0 0 chr13 77953796 77953993 -42330319 + L1Md_T LINE L1 6386 6582 0 5 1179 1862 122 18 30 chr13 77954015 77954354 -42329958 + MusHAL1 LINE L1 800 1134 -1578 5 1179 335 300 87 12 chr13 77954393 77954565 -42329747 + L1MCa LINE L1 742 926 -5582 5 1179 833 310 63 37 chr13 77954602 77955175 -42329137 + L1MCa LINE L1 4120 4707 -1614 5 1179 235 310 42 0 chr13 77955200 77955271 -42329041 + L1MC1 LINE L1 6228 6301 -32 5 1179 197 31 94 0 chr13 77956573 77956605 -42327707 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 5 1179 21 57 0 0 chr13 77956885 77956920 -42327392 + AT_rich Low_complexity Low_complexity 1 35 0 5 1179 348 24 0 0 chr13 77957698 77957739 -42326573 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 5 1179 981 55 8 0 chr13 77958104 77958232 -42326080 - B1_Mus1 SINE Alu -9 139 11 5 1179 24 53 0 0 chr13 77958239 77958277 -42326035 + AT_rich Low_complexity Low_complexity 1 38 0 5 1179 417 318 0 77 chr13 77958320 77958463 -42325849 - B3A SINE B2 -18 180 49 5 1179 6306 104 26 0 chr13 77958626 77959981 -42324331 - L1_Mus3 LINE L1 -323 6315 4932 5 1179 2034 112 10 3 chr13 77959981 77960295 -42324017 + L1_Mus3 LINE L1 6323 6638 0 5 1179 1383 210 143 0 chr13 77960387 77960701 -42323611 + ORR1D1 LTR MaLR 7 365 -9 5 1179 2171 54 18 0 chr13 77960788 77961067 -42323245 - L1Md_F3 LINE L1 -3 6581 6298 5 1179 339 336 69 23 chr13 77961261 77961477 -42322835 - L1_Mur3 LINE L1 -123 5757 5532 5 1179 11896 145 11 8 chr13 77961453 77963445 -42320867 + L1_Mm LINE L1 3663 5659 -224 5 1179 380 296 123 0 chr13 77963631 77963793 -42320519 - MLT1D LTR MaLR -7 498 317 5 1179 296 340 106 45 chr13 77963874 77964139 -42320173 - MLT1D LTR MaLR -208 297 17 5 1179 362 250 192 33 chr13 77965118 77965300 -42319012 - B3 SINE B2 -5 211 1 5 1179 304 222 13 100 chr13 77965489 77965639 -42318673 - Lx9 LINE L1 -6 7638 7502 5 1179 188 302 0 45 chr13 77965697 77965763 -42318549 + MIR3 SINE MIR 135 197 -11 5 1179 1399 184 17 75 chr13 77966207 77966501 -42317811 - ORR1A4 LTR MaLR -52 277 1 5 1179 1949 153 93 75 chr13 77966501 77966940 -42317372 - ORR1A4-int LTR MaLR 0 1509 1063 5 1179 488 270 22 14 chr13 77966977 77967116 -42317196 + B1_Mur1 SINE Alu 1 140 -9 5 1179 32 0 0 0 chr13 77967250 77967282 -42317030 + AT_rich Low_complexity Low_complexity 1 32 0 5 1179 5375 87 18 5 chr13 77967285 77968046 -42316266 - Lx3_Mus LINE L1 -1 7008 6238 5 1179 22 0 0 0 chr13 77968920 77968942 -42315370 + AT_rich Low_complexity Low_complexity 1 22 0 5 1179 1959 318 109 48 chr13 77969591 77970865 -42313447 - Lx8 LINE L1 -271 7202 5851 5 1179 289 214 20 0 chr13 77970891 77970989 -42313323 + (TA)n Simple_repeat Simple_repeat 2 101 0 5 1179 719 337 51 4 chr13 77971016 77971290 -42313022 + Lx8 LINE L1 6737 7023 -450 5 1179 423 263 66 54 chr13 77971330 77971456 -42312856 - L1_Mur3 LINE L1 -423 5457 5331 5 1179 3026 114 59 16 chr13 77971456 77971471 -42312841 - Lx3A LINE L1 -2 6979 6962 5 1179 216 0 0 0 chr13 77971471 77971495 -42312817 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 5 1179 3026 114 59 16 chr13 77971495 77971971 -42312341 - Lx3A LINE L1 -20 6961 6467 5 1179 423 263 66 54 chr13 77971971 77972085 -42312227 - L1_Mur3 LINE L1 -550 5330 5214 5 1179 199 135 37 37 chr13 77972332 77972386 -42311926 + (CATG)n Simple_repeat Simple_repeat 3 56 0 5 1179 31 26 0 0 chr13 77973015 77973053 -42311259 + AT_rich Low_complexity Low_complexity 1 38 0 5 1179 24 53 0 0 chr13 77973535 77973573 -42310739 + AT_rich Low_complexity Low_complexity 1 38 0 5 1179 34 0 0 0 chr13 77973728 77973762 -42310550 + AT_rich Low_complexity Low_complexity 1 34 0 5 1179 4409 82 2 13 chr13 77976566 77977180 -42307132 + L1Md_F2 LINE L1 5967 6573 -9 5 1179 417 268 52 148 chr13 77977354 77977387 -42306925 + CYRA11_Mm Unknown Y-chromosome 137 307 -310 5 1179 998 172 0 61 chr13 77977387 77977535 -42306777 - URR1B DNA MER1_type 0 225 89 5 1179 1277 98 11 0 chr13 77977535 77977718 -42306594 - B2_Mm1t SINE B2 -4 189 5 5 1179 998 172 0 61 chr13 77977718 77977767 -42306545 - URR1B DNA MER1_type -137 88 40 5 1179 417 268 52 148 chr13 77977767 77977786 -42306526 + CYRA11_Mm Unknown Y-chromosome 308 362 -255 5 1179 364 320 0 23 chr13 77977865 77977996 -42306316 - MER2 DNA MER2_type -50 295 168 5 1179 1671 248 24 20 chr13 77978012 77978464 -42305848 + RMER20A LTR ERVK 63 516 0 5 1179 659 331 103 16 chr13 77979092 77979335 -42304977 - B4A SINE B4 -27 265 2 6 1179 274 109 52 52 chr13 77979627 77979685 -42304627 - Lx7 LINE L1 -23 7673 7616 6 1179 572 275 98 13 chr13 77979787 77980012 -42304300 - Lx7 LINE L1 -284 7412 7169 6 1179 1015 263 102 3 chr13 77980407 77980720 -42303592 - Lx9 LINE L1 -259 7385 7042 6 1179 1575 236 183 33 chr13 77980886 77981372 -42302940 + Lx9 LINE L1 6312 6870 -774 6 1179 320 176 59 0 chr13 77981389 77981457 -42302855 + Lx9 LINE L1 6973 7044 -600 6 1179 1156 62 6 0 chr13 77982059 77982220 -42302092 + L1_Mus2 LINE L1 6405 6566 0 6 1179 204 125 0 0 chr13 77982312 77982344 -42301968 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 6 1179 1814 138 170 43 chr13 77982398 77982769 -42301543 - Lx LINE L1 -116 6538 6121 6 1179 2266 87 3 3 chr13 77982759 77983094 -42301218 - MusHAL1 LINE L1 -2163 549 215 6 1179 1269 81 132 0 chr13 77983109 77983306 -42301006 - MusHAL1 LINE L1 -1127 1585 1363 6 1179 4603 205 122 10 chr13 77983309 77984583 -42299729 - L1_Mur3 LINE L1 -969 4911 3496 6 1179 547 251 169 16 chr13 77984584 77984839 -42299473 - L1_Mur3 LINE L1 -2659 3221 2928 6 1179 285 293 0 128 chr13 77984947 77984967 -42299345 - MER63D DNA AcHobo -986 75 56 6 1179 306 0 0 0 chr13 77984967 77985001 -42299311 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1179 1025 94 0 7 chr13 77985001 77985140 -42299172 - B1_Mus1 SINE Alu -10 138 1 6 1179 285 293 0 128 chr13 77985140 77985204 -42299108 - MER63D DNA AcHobo -1006 55 2 6 1179 27 49 0 0 chr13 77985273 77985314 -42298998 + AT_rich Low_complexity Low_complexity 1 41 0 6 1179 2116 323 91 34 chr13 77985574 77986520 -42297792 - Lx8 LINE L1 0 7473 6450 6 1179 3076 42 28 10 chr13 77986520 77986909 -42297403 + MTA_Mm LTR MaLR 1 396 0 6 1179 2116 323 91 34 chr13 77986909 77987164 -42297148 - Lx8 LINE L1 -1024 6449 6205 6 147 651 309 48 24 chr13 77987776 77987982 -42296330 - ID_B1 SINE B4 0 224 14 6 1180 389 300 50 57 chr13 77987984 77988143 -42296169 + ORR1E LTR MaLR 34 191 -168 6 1180 432 342 10 60 chr13 77988205 77988404 -42295908 + B3A SINE B2 1 189 -9 6 1180 21 0 0 0 chr13 77988419 77988440 -42295872 + AT_rich Low_complexity Low_complexity 1 21 0 6 1180 336 314 63 16 chr13 77988444 77988570 -42295742 + ORR1E LTR MaLR 248 379 0 6 1180 28544 109 5 21 chr13 77989893 77992947 -42291365 - L1_Mus2 LINE L1 0 6569 3526 6 1180 2285 72 119 11 chr13 77992947 77993299 -42291013 + RLTR10 LTR ERVK 1 390 0 6 1180 28544 127 7 18 chr13 77993299 77995501 -42288811 - L1_Mus2 LINE L1 -2361 3525 1393 6 1180 866 134 21 0 chr13 77995501 77995643 -42288669 - B1_Mus2 SINE Alu -2 145 1 6 1180 28544 178 26 8 chr13 77995643 77996478 -42287834 - L1_Mus2 LINE L1 -4494 1392 419 6 1180 4197 125 40 7 chr13 77996805 77997481 -42286831 - L1_Mus3 LINE L1 -4 6634 5937 6 1180 3560 94 27 0 chr13 77997485 77998060 -42286252 + L1_Mus3 LINE L1 5357 5942 -624 6 1180 531 231 60 133 chr13 77999377 77999663 -42284649 + L1M3 LINE L1 4524 4811 -1329 6 1180 1163 250 39 52 chr13 77999691 77999999 -42284313 - MTE2a LTR MaLR -18 361 58 6 1180 1151 226 69 32 chr13 78000286 78000634 -42283678 + L1_Rod LINE L1 4556 4916 -931 1 1180 22 0 0 0 chr13 78002046 78002068 -42282244 + AT_rich Low_complexity Low_complexity 1 22 0 2 1180 241 237 118 0 chr13 78002243 78002319 -42281993 - PB1D10 SINE Alu -3 114 30 3 1180 587 108 11 0 chr13 78002378 78002471 -42281841 + (TCCC)n Simple_repeat Simple_repeat 4 97 0 4 1180 288 264 0 53 chr13 78002514 78002590 -42281722 - B4 SINE B4 0 292 221 5 1180 405 0 0 0 chr13 78002597 78002642 -42281670 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1180 226 274 32 0 chr13 78002842 78002904 -42281408 - B4A SINE B4 -194 98 35 5 1180 906 28 0 0 chr13 78003064 78003173 -42281139 + (TA)n Simple_repeat Simple_repeat 2 110 0 7 1180 325 327 82 8 chr13 78003211 78003336 -42280976 - B4A SINE B4 -129 163 26 8 1180 492 18 0 0 chr13 78003813 78003870 -42280442 + (GA)n Simple_repeat Simple_repeat 2 58 0 9 1180 21 0 0 0 chr13 78005497 78005518 -42278794 + AT_rich Low_complexity Low_complexity 1 21 0 1 1180 988 53 0 0 chr13 78005823 78006031 -42278281 - L1_Mus2 LINE L1 0 6566 6430 1 1180 23 54 0 0 chr13 78007121 78007158 -42277154 + AT_rich Low_complexity Low_complexity 1 37 0 1 1180 618 82 0 0 chr13 78007957 78008042 -42276270 + (GA)n Simple_repeat Simple_repeat 2 86 0 1 1180 297 0 0 0 chr13 78008706 78008739 -42275573 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1180 1037 38 0 0 chr13 78012360 78012492 -42271820 + B1_Mus1 SINE Alu 8 139 -9 1 1180 247 311 55 39 chr13 78012724 78012851 -42271461 - MIRc SINE MIR -92 176 48 1 1180 25 65 0 0 chr13 78013329 78013375 -42270937 + AT_rich Low_complexity Low_complexity 1 46 0 1 1180 437 210 79 63 chr13 78014102 78014229 -42270083 + RLTR11A2 LTR ERVK 1 129 -398 1 1180 283 267 10 122 chr13 78014251 78014349 -42269963 - PB1D7 SINE Alu -2 118 32 1 1180 270 0 0 0 chr13 78014351 78014381 -42269931 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2 1180 954 115 61 0 chr13 78014461 78014626 -42269686 + RLTR11A2 LTR ERVK 353 527 0 2 1180 510 248 0 0 chr13 78015087 78015200 -42269112 - PB1D9 SINE Alu -6 114 2 2 1180 24 0 0 0 chr13 78015412 78015436 -42268876 + AT_rich Low_complexity Low_complexity 1 24 0 2 1180 288 0 0 0 chr13 78015437 78015469 -42268843 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1180 414 0 0 0 chr13 78015469 78015514 -42268798 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1180 419 294 128 131 chr13 78015539 78015813 -42268499 - B4 SINE B4 -11 281 9 2 1180 321 161 24 24 chr13 78015830 78015913 -42268399 + CT-rich Low_complexity Low_complexity 5 87 0 2 1180 292 253 0 44 chr13 78015921 78016012 -42268300 + C-rich Low_complexity Low_complexity 2 88 0 2 1180 236 299 15 0 chr13 78016029 78016096 -42268216 - ID4_ SINE ID -13 70 3 2 1180 281 154 21 21 chr13 78016566 78016659 -42267653 + (TA)n Simple_repeat Simple_repeat 2 94 0 3 1180 24 0 0 0 chr13 78018191 78018215 -42266097 + AT_rich Low_complexity Low_complexity 1 24 0 3 1180 4515 201 76 11 chr13 78019257 78020311 -42264001 - Lx9 LINE L1 0 7644 6523 3 1180 588 225 15 23 chr13 78020686 78020818 -42263494 - ID_B1 SINE B4 0 224 94 3 1180 250 351 14 0 chr13 78020924 78020998 -42263314 - ID SINE ID -142 82 8 3 1180 22 0 0 0 chr13 78021345 78021367 -42262945 + AT_rich Low_complexity Low_complexity 1 22 0 3 1180 4634 147 28 12 chr13 78021466 78022265 -42262047 - Lx2 LINE L1 0 6997 6187 3 1180 231 244 11 79 chr13 78023090 78023179 -42261133 + RMER12 LTR ERVK 750 832 -490 3 1180 431 165 12 0 chr13 78023258 78023343 -42260969 + GA-rich Low_complexity Low_complexity 2 87 0 3 1180 468 302 65 0 chr13 78023387 78023556 -42260756 - Lx7 LINE L1 -375 7321 7142 3 1180 418 248 39 31 chr13 78023572 78023701 -42260611 + Lx7 LINE L1 6983 7112 -584 3 1180 225 286 64 13 chr13 78024012 78024090 -42260222 + MIRb SINE MIR 166 247 -21 4 1180 214 279 0 0 chr13 78024363 78024424 -42259888 + A-rich Low_complexity Low_complexity 1 61 0 4 1180 332 167 17 0 chr13 78025168 78025228 -42259084 + B4 SINE B4 14 74 -218 4 1180 289 359 20 46 chr13 78025567 78025719 -42258593 + ID_B1 SINE B4 77 224 0 4 1180 1521 181 147 0 chr13 78025779 78026099 -42258213 - ORR1B2 LTR MaLR 0 367 1 4 1180 267 294 11 45 chr13 78026099 78026188 -42258124 + RSINE1 SINE B4 45 130 -35 4 1180 301 317 19 19 chr13 78026513 78026619 -42257693 - PB1D10 SINE Alu 0 117 12 4 1180 4179 61 22 4 chr13 78027209 78027754 -42256558 + L1Md_F2 LINE L1 6022 6576 -6 4 1180 508 256 30 15 chr13 78027900 78028035 -42256277 - B1_Mur2 SINE Alu -8 141 5 4 1180 42 48 0 0 chr13 78029817 78029880 -42254432 + AT_rich Low_complexity Low_complexity 1 63 0 4 1180 22 0 0 0 chr13 78030314 78030336 -42253976 + AT_rich Low_complexity Low_complexity 1 22 0 5 1180 204 40 0 0 chr13 78032615 78032640 -42251672 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 1180 21 0 0 0 chr13 78034414 78034435 -42249877 + AT_rich Low_complexity Low_complexity 1 21 0 5 1180 23 0 0 0 chr13 78038743 78038766 -42245546 + AT_rich Low_complexity Low_complexity 1 23 0 5 1180 27 62 0 0 chr13 78039432 78039480 -42244832 + AT_rich Low_complexity Low_complexity 1 48 0 5 1180 492 68 0 0 chr13 78040063 78040136 -42244176 + (TG)n Simple_repeat Simple_repeat 2 74 0 5 1180 299 233 142 55 chr13 78042948 78043075 -42241237 - B1F SINE Alu -11 138 1 5 1180 795 309 138 6 chr13 78044210 78044529 -42239783 - Lx8 LINE L1 -4 7469 7109 5 1180 347 316 17 17 chr13 78044524 78044640 -42239672 - Lx7 LINE L1 -964 6732 6617 5 1180 790 302 19 5 chr13 78044881 78045087 -42239225 - B3 SINE B2 -2 214 6 5 1180 483 291 25 19 chr13 78045130 78045291 -42239021 - RSINE1 SINE B4 0 165 4 6 1180 183 373 26 26 chr13 78045398 78045511 -42238801 + L2a LINE L2 3307 3419 -7 6 1180 4639 38 0 0 chr13 78045709 78046260 -42238052 + L1Md_T LINE L1 6029 6579 -3 6 1180 23 78 0 0 chr13 78048417 78048468 -42235844 + AT_rich Low_complexity Low_complexity 1 51 0 6 1180 388 189 98 9 chr13 78048796 78048908 -42235404 - Lx9 LINE L1 -145 7499 7378 6 1180 264 228 43 122 chr13 78048925 78048942 -42235370 + MT2B2 LTR ERVL 152 159 -425 6 1180 663 248 57 0 chr13 78048942 78049083 -42235229 + B1_Mur4 SINE Alu 1 149 -1 6 1180 623 103 0 10 chr13 78049091 78049189 -42235123 + (GGGA)n Simple_repeat Simple_repeat 1 97 0 6 1180 242 177 165 10 chr13 78049193 78049290 -42235022 + Lx9 LINE L1 7527 7638 -6 6 1180 1287 251 350 31 chr13 78049345 78049713 -42234599 - Lx8 LINE L1 -4 7469 6995 6 1180 3573 78 48 44 chr13 78049713 78050253 -42234059 - L1_Mus2 LINE L1 -1 6565 6024 7 1180 1287 268 100 27 chr13 78050253 78050472 -42233840 - Lx8 LINE L1 -479 6994 6749 6 1180 492 323 80 14 chr13 78050467 78050756 -42233556 - Lx8 LINE L1 -1001 6472 6165 6 1180 1949 46 0 4 chr13 78050946 78051186 -42233126 - L1_Mus1 LINE L1 0 6567 6329 7 1180 7216 122 16 30 chr13 78051186 78051349 -42232963 - L1VL4 LINE L1 -1455 2362 2213 7 1180 3152 92 0 130 chr13 78051349 78051901 -42232411 + L1_Mus2 LINE L1 6087 6566 0 7 1180 7216 171 21 52 chr13 78051901 78053803 -42230509 - L1VL4 LINE L1 -1605 2212 437 7 1180 6058 136 33 64 chr13 78053798 78055056 -42229256 + Lx2 LINE L1 2704 3922 -1955 7 1180 744 112 0 16 chr13 78055383 78055510 -42228802 + L1Md_F2 LINE L1 6453 6577 -5 7 1180 5574 109 27 3 chr13 78055680 78056574 -42227738 + L1_Mur1 LINE L1 2962 3876 -2010 7 1180 1106 124 6 0 chr13 78056574 78056743 -42227569 + ORR1A2 LTR MaLR 158 327 0 7 1180 5107 146 39 30 chr13 78056743 78057810 -42226502 - L1_Mur2 LINE L1 -1366 4511 3435 7 1180 7488 166 21 11 chr13 78057808 78059523 -42224789 + Lx2 LINE L1 5267 6997 0 7 1180 905 309 161 21 chr13 78060677 78061191 -42223121 + MER44C DNA MER2_type 29 621 -112 7 1180 279 0 0 0 chr13 78061191 78061222 -42223090 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1180 410 300 120 5 chr13 78061222 78061303 -42223009 + MER44C DNA MER2_type 622 711 -22 7 1180 263 103 0 65 chr13 78061474 78061536 -42222776 + T-rich Low_complexity Low_complexity 1 58 0 8 1180 1151 74 0 0 chr13 78061536 78061684 -42222628 - B1_Mus1 SINE Alu 0 148 1 8 1180 354 299 205 16 chr13 78062044 78062146 -42222166 - RMER15 LTR ERVL -15 560 444 8 1180 444 67 0 0 chr13 78062146 78062206 -42222106 + (TG)n Simple_repeat Simple_repeat 2 61 0 8 1180 354 299 205 16 chr13 78062206 78062293 -42222019 - RMER15 LTR ERVL -132 443 336 8 1180 207 290 0 0 chr13 78062944 78063006 -42221306 + (TA)n Simple_repeat Simple_repeat 1 62 0 8 1180 284 308 83 71 chr13 78063065 78063233 -42221079 + MIRb SINE MIR 98 267 -1 8 1180 2452 102 101 12 chr13 78063461 78063879 -42220433 - Lx3A LINE L1 -52 6929 6475 8 1180 23 0 0 0 chr13 78063879 78063902 -42220410 + AT_rich Low_complexity Low_complexity 1 23 0 8 1180 4560 137 36 14 chr13 78063916 78064736 -42219576 + Lx LINE L1 5807 6645 -9 8 1180 5137 82 20 3 chr13 78064736 78065449 -42218863 + L1_Mus2 LINE L1 5842 6566 0 9 1180 377 177 13 0 chr13 78066653 78066732 -42217580 + A-rich Low_complexity Low_complexity 3 82 0 9 1180 412 325 12 18 chr13 78066733 78066902 -42217410 - Lx8 LINE L1 -141 7332 7165 9 1180 1581 232 95 19 chr13 78066941 78067319 -42216993 + MTD LTR MaLR 13 419 0 9 1180 1339 65 5 0 chr13 78067436 78067622 -42216690 - L1_Mus2 LINE L1 0 6566 6380 9 1180 324 70 0 0 chr13 78067732 78067775 -42216537 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1180 1095 277 17 10 chr13 78067902 78068197 -42216115 - Lx6 LINE L1 -169 7291 6995 9 1180 2103 219 61 11 chr13 78068218 78068772 -42215540 + Lx6 LINE L1 6031 6601 -859 9 1180 235 146 42 0 chr13 78068793 78068841 -42215471 - L1_Mur3 LINE L1 -530 5350 5301 9 1180 1317 189 90 39 chr13 78068853 78069243 -42215069 - Lx9 LINE L1 0 7644 7235 9 1180 792 280 15 7 chr13 78069249 78069519 -42214793 - L1_Mur3 LINE L1 -627 5253 4982 9 1180 6612 114 10 1 chr13 78069701 78070728 -42213584 - L1_Mus3 LINE L1 -6 6632 5597 1 1180 15919 129 18 2 chr13 78070727 78074391 -42209921 - L1_Mus3 LINE L1 -1941 3942 222 1 1180 2484 261 65 35 chr13 78074387 78075473 -42208839 - L1_Mur3 LINE L1 -882 4998 3881 9 1180 186 264 301 21 chr13 78075696 78075839 -42208473 + MIR SINE MIR 73 255 -7 1 1180 26 64 0 0 chr13 78075858 78075905 -42208407 + AT_rich Low_complexity Low_complexity 1 47 0 1 1180 258 420 9 0 chr13 78076463 78076575 -42207737 - ID_B1 SINE B4 -101 123 11 1 1180 444 323 63 50 chr13 78076721 78076959 -42207353 - Lx9 LINE L1 -393 7251 7011 1 1180 348 350 29 5 chr13 78076967 78077174 -42207138 + Lx9 LINE L1 7286 7497 -147 1 1180 550 273 148 53 chr13 78077239 78077385 -42206927 - RMER10A LTR ERVL -16 426 268 1 1180 243 0 0 0 chr13 78077385 78077412 -42206900 + (GGAGA)n Simple_repeat Simple_repeat 2 28 0 1 1180 550 273 148 53 chr13 78077412 78077644 -42206668 - RMER10A LTR ERVL -175 267 13 1 1180 266 204 18 18 chr13 78077675 78077730 -42206582 + Lx8 LINE L1 7221 7275 -198 1 1180 16942 139 27 14 chr13 78078092 78082026 -42202286 - L1_Mus3 LINE L1 0 6997 3011 1 1180 413 264 30 18 chr13 78082049 78082215 -42202097 - L1_Mus3 LINE L1 -5782 834 667 1 1180 1061 115 0 0 chr13 78082592 78082740 -42201572 - B1_Mus1 SINE Alu 0 148 1 1 1180 216 0 0 0 chr13 78083018 78083042 -42201270 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1180 568 304 137 39 chr13 78083748 78084156 -42200156 + Lx8 LINE L1 6967 7414 -59 1 1180 37634 35 3 7 chr13 78084481 78090910 -42193402 - L1Md_F2 LINE L1 0 6582 183 1 1180 1282 76 10 36 chr13 78091380 78091572 -42192740 - B2_Mm2 SINE B2 -7 188 2 1 1180 294 290 99 33 chr13 78091578 78091760 -42192552 - B3 SINE B2 0 216 23 1 1180 227 324 93 62 chr13 78091639 78091800 -42192512 - RMER17B LTR ERVK -106 852 687 1 1180 2384 240 83 81 chr13 78091781 78092574 -42191738 - RMER17B LTR ERVK -163 795 1 1 1180 383 211 0 78 chr13 78092574 78092651 -42191661 - B3A SINE B2 -124 74 4 1 1180 194 0 0 37 chr13 78092693 78092720 -42191592 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 1 1180 882 182 0 20 chr13 78092744 78092895 -42191417 - B1_Mur1 SINE Alu 0 149 2 1 1180 344 161 20 51 chr13 78092968 78093066 -42191246 - Lx LINE L1 -18 6979 6885 1 1180 6929 143 29 2 chr13 78093066 78094730 -42189582 - Lx LINE L1 -422 6232 4521 1 1180 1799 145 0 0 chr13 78094730 78095027 -42189285 - Lx LINE L1 -1803 4080 3784 1 1180 22 0 0 0 chr13 78095084 78095106 -42189206 + AT_rich Low_complexity Low_complexity 1 22 0 1 1180 846 262 64 50 chr13 78095115 78095492 -42188820 + Lx7 LINE L1 6998 7379 -317 1 1180 201 195 24 0 chr13 78095498 78095539 -42188773 + T-rich Low_complexity Low_complexity 1 42 0 1 1180 22 0 0 0 chr13 78095846 78095868 -42188444 + AT_rich Low_complexity Low_complexity 1 22 0 1 1180 24 32 0 0 chr13 78096618 78096649 -42187663 + AT_rich Low_complexity Low_complexity 1 31 0 1 1180 22 0 0 0 chr13 78097825 78097847 -42186465 + AT_rich Low_complexity Low_complexity 1 22 0 1 1180 22 0 0 0 chr13 78098014 78098036 -42186276 + AT_rich Low_complexity Low_complexity 1 22 0 1 1180 465 230 0 0 chr13 78100376 78100489 -42183823 - L1MB7 LINE L1 -16 6168 6056 1 1180 222 216 0 102 chr13 78100509 78100617 -42183695 + T-rich Low_complexity Low_complexity 1 97 0 1 1180 8333 102 14 46 chr13 78100635 78102017 -42182295 - Lx3_Mus LINE L1 0 7009 5672 1 1180 231 226 10 19 chr13 78102104 78102208 -42182104 + CT-rich Low_complexity Low_complexity 3 105 0 1 1180 502 212 61 0 chr13 78102226 78102325 -42181987 - PB1D9 SINE Alu -7 113 9 1 1180 220 333 203 8 chr13 78102325 78102349 -42181963 - B4 SINE B4 -64 187 70 1 1180 270 256 162 13 chr13 78102508 78102662 -42181650 - L1M4 LINE L1 -1334 4812 4636 1 1180 400 259 36 24 chr13 78102936 78103102 -42181210 - L1M4 LINE L1 -1480 4666 4499 1 1180 353 274 12 0 chr13 78103179 78103263 -42181049 + Lx8 LINE L1 7207 7291 -182 1 1180 290 281 0 123 chr13 78103261 78103415 -42180897 - L1M4 LINE L1 -1900 4246 4112 1 1180 1110 49 0 0 chr13 78103454 78103597 -42180715 + L1_Mus2 LINE L1 6424 6566 0 1 1180 573 286 0 16 chr13 78103969 78104097 -42180215 - B1_Mur3 SINE Alu -18 131 6 1 1180 546 16 0 0 chr13 78104911 78104974 -42179338 + (GAAA)n Simple_repeat Simple_repeat 1 63 0 1 1180 823 46 38 15 chr13 78104996 78105129 -42179183 + (GAGAA)n Simple_repeat Simple_repeat 1 136 0 1 1180 245 29 29 0 chr13 78105246 78105280 -42179032 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1 1180 288 0 0 0 chr13 78106000 78106032 -42178280 + (ATTG)n Simple_repeat Simple_repeat 3 34 0 1 1180 21 0 0 0 chr13 78106462 78106483 -42177829 + AT_rich Low_complexity Low_complexity 1 21 0 1 1180 3322 140 10 0 chr13 78106813 78107321 -42176991 - Lx2A1 LINE L1 -1 7007 6495 1 1180 860 145 52 7 chr13 78107378 78107531 -42176781 + URR1B DNA MER1_type 65 224 -1 1 1180 411 269 98 35 chr13 78107531 78107571 -42176741 - CYRA11_Mm Unknown Y-chromosome -438 179 129 1 1180 320 346 38 19 chr13 78107532 78107691 -42176621 - MLT-int LTR MaLR -69 1666 1505 1 1180 365 261 193 33 chr13 78108674 78108944 -42175368 - L1M2 LINE L1 -577 5735 5423 1 1180 286 297 0 0 chr13 78108950 78109024 -42175288 - ID4_ SINE ID -5 78 5 1 1180 335 294 96 0 chr13 78109038 78109174 -42175138 - B1F1 SINE Alu 0 149 1 1 1180 415 221 37 17 chr13 78109194 78109367 -42174945 - L1M2 LINE L1 -865 5426 5259 1 1180 692 206 215 12 chr13 78109579 78109706 -42174606 - Lx9 LINE L1 0 7644 7478 1 1180 396 0 0 0 chr13 78109706 78109750 -42174562 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1180 692 206 215 12 chr13 78109750 78109878 -42174434 - Lx9 LINE L1 -167 7477 7338 1 1180 302 200 31 0 chr13 78109968 78110033 -42174279 - Lx9 LINE L1 -327 7317 7251 1 1180 406 284 39 33 chr13 78110069 78110251 -42174061 - L1M2 LINE L1 -1184 4959 4777 1 1180 1690 233 93 20 chr13 78110265 78110865 -42173447 - Lx9 LINE L1 -1 7643 7000 1 1180 261 181 14 27 chr13 78110876 78110950 -42173362 + Lx9 LINE L1 6884 6956 -688 1 1180 790 275 7 37 chr13 78110947 78111245 -42173067 - L1M2 LINE L1 -1373 4770 4482 1 1180 1207 246 155 11 chr13 78111252 78111601 -42172711 - MTD LTR MaLR 0 419 21 1 1180 577 313 97 61 chr13 78111778 78112108 -42172204 + ORR1E LTR MaLR 16 357 -2 1 1180 910 279 46 75 chr13 78112288 78112637 -42171675 - MTE2a LTR MaLR -10 369 31 1 1180 286 286 9 28 chr13 78112652 78112760 -42171552 - L1M2 LINE L1 -2061 4082 3977 1 1180 1943 207 45 22 chr13 78112761 78113206 -42171106 + Lx9 LINE L1 6643 7097 -547 1 1180 183 139 0 0 chr13 78113214 78113250 -42171062 + (ATTAG)n Simple_repeat Simple_repeat 2 37 0 1 1180 274 192 0 63 chr13 78113251 78113362 -42170950 + Lx9 LINE L1 7524 7627 -17 1 1180 359 307 79 6 chr13 78113407 78113500 -42170812 - L1M2 LINE L1 -2191 3952 3858 1 1180 342 0 0 0 chr13 78113500 78113538 -42170774 + (CTTA)n Simple_repeat Simple_repeat 1 38 0 1 1180 359 307 79 6 chr13 78113538 78113621 -42170691 - L1M2 LINE L1 -2286 3857 3764 1 1180 513 0 0 0 chr13 78114018 78114075 -42170237 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1180 651 347 16 27 chr13 78114238 78114496 -42169816 - MIR SINE MIR -5 257 3 1 1180 24 67 0 0 chr13 78114920 78114965 -42169347 + AT_rich Low_complexity Low_complexity 1 45 0 1 1180 188 217 99 88 chr13 78116650 78116741 -42167571 + L3 LINE CR1 2282 2373 -2116 1 1180 677 137 0 15 chr13 78116918 78117051 -42167261 + L1_Mm LINE L1 2032 2162 -3721 1 1181 218 189 0 0 chr13 78119059 78119096 -42165216 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 1 1181 21 0 0 0 chr13 78120253 78120274 -42164038 + AT_rich Low_complexity Low_complexity 1 21 0 1 1181 402 21 0 0 chr13 78120918 78120965 -42163347 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1181 504 0 0 0 chr13 78121078 78121134 -42163178 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1181 500 45 0 15 chr13 78121700 78121768 -42162544 + (TG)n Simple_repeat Simple_repeat 1 67 0 1 1181 378 159 0 0 chr13 78123199 78123268 -42161044 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 1181 250 377 21 35 chr13 78123374 78123517 -42160795 - RSINE1 SINE B4 -17 148 8 1 1181 24 0 0 0 chr13 78123585 78123609 -42160703 + AT_rich Low_complexity Low_complexity 1 24 0 1 1181 1444 209 88 48 chr13 78126789 78127207 -42157105 - Lx7 LINE L1 -4 7692 7258 1 1181 245 341 60 22 chr13 78128197 78128380 -42155932 + LTR16A LTR ERVL 216 405 -46 1 1181 1882 278 93 5 chr13 78128823 78129381 -42154931 + Lx6 LINE L1 6852 7458 -2 1 1181 227 175 18 0 chr13 78129387 78129444 -42154868 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1181 381 303 95 60 chr13 78129725 78129841 -42154471 - RSINE1 SINE B4 0 165 46 1 1181 306 241 33 49 chr13 78131092 78131214 -42153098 - Lx8 LINE L1 -1 7472 7353 1 1181 1067 108 0 19 chr13 78131651 78131811 -42152501 + B2_Mm2 SINE B2 2 158 -37 1 1181 180 0 0 0 chr13 78131812 78131832 -42152480 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 1 1181 572 146 0 10 chr13 78131961 78132065 -42152247 + GA-rich Low_complexity Low_complexity 2 104 0 1 1181 468 0 0 0 chr13 78133975 78134027 -42150285 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1181 476 254 162 11 chr13 78134187 78134366 -42149946 - Lx8 LINE L1 -208 7265 7060 1 1181 21 0 0 0 chr13 78135090 78135111 -42149201 + AT_rich Low_complexity Low_complexity 1 21 0 1 1181 216 0 0 0 chr13 78135318 78135342 -42148970 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1181 27 29 0 0 chr13 78138046 78138080 -42146232 + AT_rich Low_complexity Low_complexity 1 34 0 1 1181 360 0 0 0 chr13 78138310 78138350 -42145962 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1181 6619 38 0 2 chr13 78139590 78140385 -42143927 + L1Md_T LINE L1 5790 6582 0 1 1181 227 338 0 0 chr13 78140564 78140641 -42143671 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 1181 378 136 51 0 chr13 78141463 78141581 -42142731 + CT-rich Low_complexity Low_complexity 1 124 0 1 1181 399 235 11 45 chr13 78141643 78141732 -42142580 + B3A SINE B2 88 173 -25 1 1181 279 71 0 0 chr13 78141751 78141793 -42142519 + (ATTG)n Simple_repeat Simple_repeat 4 45 0 1 1181 1158 118 0 0 chr13 78141793 78141954 -42142358 - B2_Mm2 SINE B2 -34 161 1 1 1181 318 281 70 40 chr13 78141988 78142088 -42142224 + RSINE1 SINE B4 8 110 -55 1 1181 384 22 0 0 chr13 78142115 78142160 -42142152 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1181 3530 87 79 2 chr13 78142390 78142922 -42141390 - Lx3_Mus LINE L1 -1 7008 6436 1 1181 459 0 0 0 chr13 78145055 78145106 -42139206 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1181 22 70 0 0 chr13 78145505 78145548 -42138764 + AT_rich Low_complexity Low_complexity 1 43 0 1 1181 282 282 31 100 chr13 78146666 78146796 -42137516 - MLT2F LTR ERVL -2 661 541 1 1181 1429 300 98 64 chr13 78146757 78147369 -42136943 + MER82 DNA MER2_type 14 646 -7 1 1181 374 372 65 0 chr13 78147423 78147576 -42136736 - MLT2F LTR ERVL -94 569 407 1 1181 270 0 0 0 chr13 78147821 78147851 -42136461 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1181 379 245 64 109 chr13 78147970 78148080 -42136232 + B1F SINE Alu 11 115 -34 2 1181 750 41 0 0 chr13 78148082 78148180 -42136132 + (TG)n Simple_repeat Simple_repeat 2 99 0 2 1181 242 56 28 0 chr13 78148180 78148215 -42136097 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1181 426 346 85 55 chr13 78148385 78148471 -42135841 - ERVL-E-int LTR ERVL -567 5100 5009 2 1181 1467 199 69 41 chr13 78148471 78148833 -42135479 - ORR1D1 LTR MaLR 0 374 3 2 1181 426 346 85 55 chr13 78148833 78149147 -42135165 - ERVL-E-int LTR ERVL -659 5008 4688 2 1181 519 310 0 0 chr13 78149192 78149321 -42134991 - ERVL-E-int LTR ERVL -1060 4607 4479 2 1181 1040 290 88 3 chr13 78149353 78149682 -42134630 + MLT1F2 LTR MaLR 203 559 -1 2 1181 1102 107 0 11 chr13 78150299 78150478 -42133834 + (GGGA)n Simple_repeat Simple_repeat 2 178 0 2 1181 998 143 6 0 chr13 78150478 78150653 -42133659 + (GAAA)n Simple_repeat Simple_repeat 3 178 0 2 1181 338 348 67 18 chr13 78150988 78151152 -42133160 + B3A SINE B2 11 182 -16 2 1181 376 203 43 43 chr13 78154050 78154189 -42130123 + Lx4B LINE L1 6914 7052 -6 2 1181 891 258 106 62 chr13 78155069 78155342 -42128970 + B4A SINE B4 8 292 0 2 1181 363 266 18 60 chr13 78155559 78155695 -42128617 - B1F SINE Alu -12 137 1 2 1181 5863 54 14 11 chr13 78155824 78156586 -42127726 + L1Md_F2 LINE L1 5806 6570 -12 2 1181 648 0 0 0 chr13 78156591 78156663 -42127649 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 2 1181 376 370 108 8 chr13 78156707 78156958 -42127354 + Tigger6a DNA MER2_type 7 282 -801 2 1181 959 87 7 0 chr13 78157965 78158103 -42126209 + L1_Mus2 LINE L1 6428 6566 0 2 1181 4673 106 1 1 chr13 78158262 78158936 -42125376 + L1_Mus2 LINE L1 4457 5130 -753 2 1181 1805 180 49 6 chr13 78158936 78159260 -42125052 + MTC LTR MaLR 32 369 -52 2 1181 198 0 0 0 chr13 78159260 78159282 -42125030 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1181 6541 85 56 6 chr13 78159282 78160667 -42123645 + L1_Mus2 LINE L1 5123 6566 0 2 1181 26 50 0 0 chr13 78160670 78160710 -42123602 + AT_rich Low_complexity Low_complexity 1 40 0 2 1181 207 283 19 0 chr13 78161804 78161857 -42122455 - L2a LINE L2 -33 3393 3340 2 1181 234 0 0 0 chr13 78165557 78165583 -42118729 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1181 822 292 93 20 chr13 78166152 78166657 -42117655 - L1MB4 LINE L1 -31 6149 5604 2 1181 21 0 0 0 chr13 78166663 78166684 -42117628 + AT_rich Low_complexity Low_complexity 1 21 0 2 1181 1293 289 81 27 chr13 78166694 78167278 -42117034 - Lx8 LINE L1 -5 7468 6854 2 1181 638 259 31 41 chr13 78167281 78167597 -42116715 - L1MB4 LINE L1 -576 5602 5283 2 1181 7873 107 36 21 chr13 78167717 78168934 -42115378 - Lx2 LINE L1 0 6997 5763 2 1181 3321 183 360 9 chr13 78168945 78170146 -42114166 - L1_Mur3 LINE L1 -461 5419 3798 2 1181 6997 94 103 17 chr13 78170256 78171447 -42112865 - Lx3_Mus LINE L1 -9 7000 5707 2 1181 186 43 0 0 chr13 78172469 78172492 -42111820 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 2 1181 1242 207 8 38 chr13 78172524 78172785 -42111527 + ORR1B2 LTR MaLR 1 253 -114 2 1181 266 239 42 14 chr13 78172806 78172878 -42111434 - ID2 SINE ID -2 81 8 2 1181 400 212 0 23 chr13 78173073 78173160 -42111152 - B1_Mur2 SINE Alu -9 140 56 2 1181 23 33 0 0 chr13 78173777 78173807 -42110505 + AT_rich Low_complexity Low_complexity 1 30 0 2 1181 921 243 128 34 chr13 78173913 78174211 -42110101 - Lx6 LINE L1 0 7460 7135 2 1181 267 267 0 0 chr13 78176415 78176501 -42107811 + Lx9 LINE L1 7552 7637 -7 2 1181 22 0 0 0 chr13 78177806 78177828 -42106484 + AT_rich Low_complexity Low_complexity 1 22 0 2 1181 1011 250 68 14 chr13 78178012 78178304 -42106008 - Lx8 LINE L1 -326 7147 6840 2 1181 1075 149 24 9 chr13 78178350 78178560 -42105752 + Lx LINE L1 6441 6653 -1 2 1181 21 0 0 0 chr13 78178567 78178588 -42105724 + AT_rich Low_complexity Low_complexity 1 21 0 2 1181 3972 45 0 0 chr13 78178735 78179207 -42105105 + L1Md_T LINE L1 6110 6581 -1 2 1181 5259 73 40 19 chr13 78179708 78180436 -42103876 + L1_Mus2 LINE L1 5824 6566 0 2 1181 293 329 0 0 chr13 78181914 78181996 -42102316 - B4 SINE B4 0 292 211 2 1181 338 0 24 0 chr13 78184974 78185016 -42099296 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2 1181 1168 75 0 0 chr13 78185016 78185154 -42099158 - B1_Mus2 SINE Alu -7 140 3 2 1181 207 42 20 78 chr13 78185931 78185982 -42098330 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1181 24 32 0 0 chr13 78185983 78186014 -42098298 + AT_rich Low_complexity Low_complexity 1 31 0 2 1181 298 328 82 22 chr13 78186245 78186379 -42097933 + Charlie17a DNA MER1_type 64 205 -14 2 1181 341 285 49 0 chr13 78186836 78186959 -42097353 - L1ME2 LINE L1 -8 6156 6028 2 1181 694 309 125 4 chr13 78187026 78187491 -42096821 - L1MB8 LINE L1 -251 5927 5407 2 1181 222 193 35 0 chr13 78188257 78188314 -42095998 + A-rich Low_complexity Low_complexity 3 61 0 2 1181 36331 16 0 8 chr13 78189325 78194933 -42089379 + L1Md_A LINE L1 25 5586 -297 2 1181 8717 17 3 0 chr13 78194933 78195926 -42088386 + L1Md_A LINE L1 5587 6582 0 2 1181 403 182 69 131 chr13 78195944 78196089 -42088223 + B1_Mur1 SINE Alu 5 140 -9 2 1181 4999 77 9 6 chr13 78196758 78197434 -42086878 - L1_Mus1 LINE L1 0 6567 5890 2 1181 402 292 38 94 chr13 78197570 78197910 -42086402 - L1MB8 LINE L1 -84 6094 5774 2 1181 30141 108 11 15 chr13 78198075 78203968 -42080344 - L1_Mus1 LINE L1 0 6567 725 2 1181 456 239 44 7 chr13 78203975 78204110 -42080202 - L1_Mus1 LINE L1 -5813 803 664 2 1181 312 137 0 0 chr13 78204207 78204258 -42080054 + (T)n Simple_repeat Simple_repeat 1 51 0 2 1181 771 171 7 60 chr13 78204268 78204417 -42079895 - B1_Mur4 SINE Alu -9 141 1 2 1181 444 67 0 0 chr13 78204702 78204762 -42079550 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1181 22 35 0 0 chr13 78205060 78205089 -42079223 + AT_rich Low_complexity Low_complexity 1 29 0 2 1181 1316 163 0 0 chr13 78205610 78205831 -42078481 - Lx2 LINE L1 -2 6995 6775 2 1181 5484 135 13 3 chr13 78205831 78206740 -42077572 - Lx2 LINE L1 -363 6634 5717 2 1181 5661 61 8 0 chr13 78206718 78207469 -42076843 - L1VL1 LINE L1 -5472 950 194 2 1181 1548 186 107 17 chr13 78207469 78207814 -42076498 - L1_Mur2 LINE L1 -42 5835 5460 2 1181 1575 138 8 71 chr13 78207818 78208169 -42076143 - L1_Mur2 LINE L1 -2118 3759 3431 2 1181 4497 100 17 1 chr13 78208182 78209158 -42075154 - L1VL4 LINE L1 -1971 1588 597 2 1181 32 26 0 0 chr13 78209158 78209197 -42075115 + AT_rich Low_complexity Low_complexity 1 39 0 2 1181 26602 55 29 1 chr13 78209246 78213557 -42070755 - L1Md_F2 LINE L1 -12 6570 2127 2 1181 310 238 0 0 chr13 78213556 78213640 -42070672 - L1_Mus1 LINE L1 -6201 415 332 2 1181 761 230 90 11 chr13 78213631 78213908 -42070404 - L1VL1 LINE L1 -6123 299 1 2 1181 730 286 37 29 chr13 78213910 78214286 -42070026 - L1VL4 LINE L1 -5689 871 517 2 1181 2146 166 30 4 chr13 78214292 78214849 -42069463 + L1_Mur2 LINE L1 1131 1705 -4172 2 1181 1362 185 30 3 chr13 78215121 78215425 -42068887 + L1_Mur2 LINE L1 1702 2013 -3864 2 1181 4323 156 19 12 chr13 78215429 78216265 -42068047 - L1_Mur1 LINE L1 -916 4970 4129 2 1181 936 130 3 196 chr13 78216265 78216561 -42067751 + L1_Mur1 LINE L1 4993 5231 -655 2 1181 7407 125 19 14 chr13 78216557 78217025 -42067287 + L1_Mus3 LINE L1 4629 5097 -786 2 1181 840 92 129 8 chr13 78217025 78217157 -42067155 + B1_Mus1 SINE Alu 1 148 0 2 1181 7407 111 45 5 chr13 78217157 78218648 -42065664 + L1_Mus3 LINE L1 5098 6633 -5 2 1181 1024 212 19 12 chr13 78219216 78219474 -42064838 - L1_Mur1 LINE L1 -5841 1143 884 2 1181 222 37 0 0 chr13 78219771 78219798 -42064514 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 2 1181 5150 112 6 6 chr13 78219798 78220606 -42063706 - Lx3_Mus LINE L1 -24 6985 6178 2 1181 396 0 0 0 chr13 78221784 78221828 -42062484 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1181 545 286 72 96 chr13 78222089 78222142 -42062170 - B4 SINE B4 -15 277 117 2 1181 927 147 7 7 chr13 78222142 78222286 -42062026 - B1_Mur2 SINE Alu 0 149 6 2 1181 545 286 72 96 chr13 78222286 78222298 -42062014 - B4 SINE B4 -15 116 74 2 1181 445 265 10 10 chr13 78224192 78224291 -42060021 - PB1D10 SINE Alu -5 112 14 2 1181 282 277 89 0 chr13 78224595 78224696 -42059616 - MIR SINE MIR -133 129 20 2 1181 351 0 0 0 chr13 78225772 78225811 -42058501 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1181 322 333 99 96 chr13 78226184 78226476 -42057836 - MLT1G3 LTR MaLR -205 390 98 2 1181 383 394 29 34 chr13 78226498 78226737 -42057575 + Lx8 LINE L1 6961 7198 -275 2 1181 729 0 0 0 chr13 78226766 78226847 -42057465 + (TA)n Simple_repeat Simple_repeat 2 82 0 2 1181 1743 191 121 19 chr13 78227066 78227423 -42056889 + ORR1D1-int LTR MaLR 762 1202 -168 2 1181 4071 68 9 27 chr13 78227423 78227982 -42056330 - L1Md_F2 LINE L1 -12 6570 6022 2 1181 1743 189 137 22 chr13 78227982 78228134 -42056178 + ORR1D1-int LTR MaLR 1203 1369 -1 2 1181 917 198 28 22 chr13 78228136 78228317 -42055995 + ORR1D1 LTR MaLR 3 184 -190 2 1181 366 188 0 0 chr13 78228317 78228413 -42055899 + CT-rich Low_complexity Low_complexity 1 96 0 2 1181 651 191 225 0 chr13 78228413 78228607 -42055705 + ORR1D1 LTR MaLR 164 378 0 2 1181 335 340 47 0 chr13 78228609 78228715 -42055597 + B4A SINE B4 172 282 -10 2 1181 523 267 13 7 chr13 78228721 78228872 -42055440 + Lx8 LINE L1 6647 6798 -675 2 1181 31 68 0 0 chr13 78229233 78229292 -42055020 + AT_rich Low_complexity Low_complexity 1 59 0 2 1181 222 227 0 0 chr13 78229334 78229378 -42054934 - B2_Mm2 SINE B2 -93 102 59 2 1181 423 0 0 0 chr13 78229875 78229922 -42054390 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1181 423 0 0 0 chr13 78229922 78229968 -42054344 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1181 626 299 29 41 chr13 78230509 78230680 -42053632 - B4A SINE B4 0 292 124 2 1181 21 0 0 0 chr13 78232122 78232143 -42052169 + AT_rich Low_complexity Low_complexity 1 21 0 2 1181 1968 107 54 67 chr13 78232983 78233354 -42050958 - Lx LINE L1 -4 6650 6285 2 1181 657 263 65 10 chr13 78233742 78233942 -42050370 - B3 SINE B2 -5 211 1 2 1181 28 48 0 0 chr13 78236226 78236268 -42048044 + AT_rich Low_complexity Low_complexity 1 42 0 2 1181 5947 90 82 10 chr13 78236268 78237190 -42047122 - Lx3_Mus LINE L1 0 7009 6021 2 1181 180 0 0 0 chr13 78238391 78238411 -42045901 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 1181 1904 160 18 35 chr13 78238415 78238758 -42045554 - Lx3B LINE L1 -2 6971 6635 2 1181 198 0 0 0 chr13 78241457 78241479 -42042833 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1181 538 238 46 8 chr13 78243152 78243283 -42041029 + B1_Mur1 SINE Alu 1 136 -13 3 1181 1238 209 74 10 chr13 78243301 78243600 -42040712 + Lx5 LINE L1 6730 7047 -3 3 1181 2206 98 57 38 chr13 78244384 78244756 -42039556 + Lx LINE L1 6276 6654 0 3 1181 191 336 70 8 chr13 78244791 78244920 -42039392 - L2 LINE L2 -816 2603 2467 3 1181 288 0 0 0 chr13 78245000 78245032 -42039280 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1181 538 218 18 9 chr13 78245498 78245609 -42038703 + B3 SINE B2 5 116 -100 3 1181 369 0 0 0 chr13 78245967 78246008 -42038304 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1181 247 243 6 11 chr13 78246068 78246247 -42038065 + (TG)n Simple_repeat Simple_repeat 2 179 0 3 1181 34 24 0 0 chr13 78246967 78247008 -42037304 + AT_rich Low_complexity Low_complexity 1 41 0 3 1181 737 142 23 38 chr13 78247740 78247872 -42036440 - B1_Mur3 SINE Alu 0 149 20 3 1181 3166 132 14 100 chr13 78247893 78248620 -42035692 - RMER17A LTR ERVK -1 750 87 3 1181 595 48 0 0 chr13 78248659 78248742 -42035570 + L1_Mus2 LINE L1 6483 6565 -1 3 1182 638 232 161 5 chr13 78251060 78251246 -42033066 - B3 SINE B2 -1 215 1 3 1182 583 143 76 0 chr13 78251296 78251401 -42032911 - B1_Mus1 SINE Alu -34 114 2 3 1182 719 280 56 158 chr13 78251860 78252182 -42032130 + B4A SINE B4 4 292 0 3 1182 229 273 0 0 chr13 78252182 78252237 -42032075 + (CA)n Simple_repeat Simple_repeat 1 55 0 3 1182 2188 74 19 16 chr13 78255263 78255578 -42028734 + L1_Mus3 LINE L1 6322 6637 -1 3 1182 936 51 0 0 chr13 78255592 78255710 -42028602 + (GAAA)n Simple_repeat Simple_repeat 3 120 0 3 1182 833 107 215 0 chr13 78255720 78255869 -42028443 + B2_Mm2 SINE B2 1 181 -14 3 1182 187 301 37 46 chr13 78256184 78256292 -42028020 + L2a LINE L2 3267 3373 -53 3 1182 198 0 0 0 chr13 78256917 78256939 -42027373 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1182 207 358 95 22 chr13 78258151 78258288 -42026024 - L2a LINE L2 0 3426 3280 3 1182 306 0 0 0 chr13 78258851 78258885 -42025427 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1182 288 389 81 5 chr13 78259024 78259246 -42025066 - MIRc SINE MIR -15 253 15 3 1182 258 324 13 66 chr13 78259883 78259959 -42024353 + tRNA-Ala-GCY_ tRNA tRNA 1 72 -3 3 1182 353 317 5 28 chr13 78260038 78260252 -42024060 - Lx8 LINE L1 -1499 5974 5766 3 1182 585 0 0 0 chr13 78263120 78263185 -42021127 + (GAAAA)n Simple_repeat Simple_repeat 3 67 0 3 1182 5471 80 33 23 chr13 78263929 78264786 -42019526 - Lx3_Mus LINE L1 -373 6636 5772 3 1182 1283 169 64 0 chr13 78264775 78265041 -42019271 - L1_Mur2 LINE L1 -376 5501 5219 3 1182 2138 164 61 5 chr13 78265045 78265485 -42018827 + L1_Mur2 LINE L1 4783 5247 -630 3 1182 197 65 0 31 chr13 78265494 78265526 -42018786 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 3 1182 698 262 94 49 chr13 78265553 78266129 -42018183 - Lx8 LINE L1 -430 5450 4903 3 1182 858 297 15 76 chr13 78266513 78266921 -42017391 - Lx8 LINE L1 -211 7262 6880 3 1182 831 257 85 30 chr13 78267630 78267959 -42016353 + Lx8 LINE L1 7119 7465 -8 3 1182 26 50 0 0 chr13 78268062 78268102 -42016210 + AT_rich Low_complexity Low_complexity 1 40 0 3 1182 226 281 31 15 chr13 78268186 78268251 -42016061 - MLT1A1 LTR MaLR -41 367 302 3 1182 212 188 0 20 chr13 78268303 78268352 -42015960 + T-rich Low_complexity Low_complexity 6 53 0 3 1182 335 312 54 42 chr13 78268572 78268739 -42015573 - L1ME1 LINE L1 -150 6029 5861 3 1182 1356 235 44 76 chr13 78268759 78268928 -42015384 - MTE2a LTR MaLR 0 374 206 3 1182 1308 119 0 5 chr13 78268928 78269122 -42015190 + B2_Mm2 SINE B2 2 194 -1 3 1182 1356 235 35 82 chr13 78269122 78269198 -42015114 - MTE2a LTR MaLR -174 205 149 3 1182 189 0 0 0 chr13 78269198 78269219 -42015093 + (CA)n Simple_repeat Simple_repeat 1 21 0 3 1182 1356 235 35 82 chr13 78269219 78269365 -42014947 - MTE2a LTR MaLR -231 148 1 3 1182 256 299 61 10 chr13 78269381 78269479 -42014833 - L1ME1 LINE L1 -353 5811 5709 3 1182 439 221 55 110 chr13 78269755 78269882 -42014430 - B1_Mur3 SINE Alu 0 120 1 3 1182 214 298 17 50 chr13 78269883 78269943 -42014369 - B1F1 SINE Alu -91 58 1 3 1182 357 267 108 6 chr13 78270118 78270284 -42014028 - Lx7 LINE L1 0 7696 7514 3 1182 3873 142 20 16 chr13 78270284 78270979 -42013333 - Lx3C LINE L1 -104 5782 5085 3 1182 1720 137 7 0 chr13 78270978 78271262 -42013050 + Lx3C LINE L1 5749 6034 -942 3 1182 223 384 59 7 chr13 78271318 78271470 -42012842 - MIRm SINE MIR -98 178 19 3 1182 37343 34 0 0 chr13 78271846 78277259 -42007053 - L1Md_T LINE L1 0 6582 1170 3 1182 5583 157 25 31 chr13 78277265 78278350 -42005962 - L1Md_T LINE L1 -5411 1205 128 3 1182 342 61 0 0 chr13 78278563 78278612 -42005700 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1182 523 293 19 6 chr13 78278720 78278878 -42005434 + ID_B1 SINE B4 45 204 -20 3 1182 660 26 0 0 chr13 78278881 78278959 -42005353 + (TC)n Simple_repeat Simple_repeat 2 79 0 3 1182 432 279 0 18 chr13 78278997 78279110 -42005202 + PB1D10 SINE Alu 4 114 -3 3 1182 31 0 0 0 chr13 78279128 78279159 -42005153 + AT_rich Low_complexity Low_complexity 1 31 0 3 1182 659 278 31 16 chr13 78279190 78279446 -42004866 + L1VL2 LINE L1 95 354 -5981 3 1182 1981 141 31 40 chr13 78279639 78279993 -42004319 - Lx2B LINE L1 0 7000 6650 3 1182 6405 57 6 4 chr13 78280271 78281067 -42003245 - L1Md_F2 LINE L1 -2 6580 5783 3 1182 8322 40 8 0 chr13 78281067 78282160 -42002152 - L1Md_A LINE L1 -6 6576 5475 3 1182 465 291 59 26 chr13 78282226 78282378 -42001934 - B3 SINE B2 0 216 60 3 1182 441 0 0 0 chr13 78282488 78282537 -42001775 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1182 233 146 0 0 chr13 78282830 78282871 -42001441 + B2_Mm2 SINE B2 3 43 -152 3 1182 3255 78 26 17 chr13 78282895 78283362 -42000950 + L1_Mus3 LINE L1 6166 6636 -2 3 1182 374 223 48 5 chr13 78283481 78283571 -42000741 - B1F SINE Alu -24 125 36 3 1182 294 191 15 0 chr13 78283601 78283669 -42000643 - Lx9 LINE L1 -291 7353 7285 3 1182 512 248 0 0 chr13 78283709 78283810 -42000502 - Lx9 LINE L1 -365 7279 7179 3 1182 23 0 0 0 chr13 78283939 78283962 -42000350 + AT_rich Low_complexity Low_complexity 1 23 0 3 1182 246 214 122 37 chr13 78284507 78284614 -41999698 - Lx8 LINE L1 0 7473 7358 3 1182 577 307 11 0 chr13 78284848 78285027 -41999285 - Lx6 LINE L1 -179 7281 7101 3 1182 4450 68 22 2 chr13 78285727 78286306 -41998006 - L1_Mus3 LINE L1 0 6638 6048 3 1182 1888 81 0 0 chr13 78286308 78286554 -41997758 + L1_Mus3 LINE L1 5791 6036 -602 3 1182 1057 145 35 48 chr13 78286526 78286558 -41997754 + Lx3_Mus LINE L1 5934 5963 -1046 3 1182 5220 76 41 109 chr13 78286558 78287141 -41997171 - Lx3_Mus LINE L1 0 7009 6411 3 1182 207 0 0 0 chr13 78287141 78287164 -41997148 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1182 5220 76 41 109 chr13 78287164 78287487 -41996825 - Lx3_Mus LINE L1 -599 6410 6165 3 1182 1057 145 35 48 chr13 78287487 78287685 -41996627 + Lx3_Mus LINE L1 5964 6161 -848 3 1182 881 248 15 0 chr13 78288242 78288448 -41995864 + B3 SINE B2 8 216 0 3 1182 853 160 0 0 chr13 78288455 78288586 -41995726 + B1_Mus1 SINE Alu 4 134 -14 3 1182 456 35 0 0 chr13 78288591 78288649 -41995663 + (TAG)n Simple_repeat Simple_repeat 2 59 0 3 1182 245 349 28 11 chr13 78289255 78289359 -41994953 + PB1D10 SINE Alu 1 110 -39 3 1182 2085 227 46 4 chr13 78289682 78290143 -41994169 - Lx6 LINE L1 -7 7453 6974 3 1182 1120 93 0 12 chr13 78290249 78290413 -41993899 + B2_Mm2 SINE B2 3 164 -31 3 1182 198 0 0 0 chr13 78290414 78290436 -41993876 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 3 1182 332 152 384 0 chr13 78290495 78290594 -41993718 - B1_Mus2 SINE Alu -4 143 7 3 1182 252 266 110 0 chr13 78290628 78290801 -41993511 + L1M5 LINE L1 4250 4441 -1705 3 1182 235 282 186 8 chr13 78290903 78290927 -41993385 - B1F2 SINE Alu 0 149 11 3 1182 389 277 85 0 chr13 78290927 78291021 -41993291 - ID_B1 SINE B4 -31 193 92 3 1182 612 135 0 0 chr13 78291024 78291135 -41993177 + (TCCC)n Simple_repeat Simple_repeat 4 114 0 3 1182 336 273 110 10 chr13 78291172 78291272 -41993040 - RSINE1 SINE B4 -12 153 44 3 1182 273 293 49 0 chr13 78291332 78291414 -41992898 - PB1 SINE Alu -36 91 6 3 1182 1777 320 157 30 chr13 78291606 78292856 -41991456 + MTE-int LTR MaLR 13 1420 -160 3 1182 1096 109 0 0 chr13 78292857 78293004 -41991308 - B1_Mus1 SINE Alu 0 148 2 3 1182 289 185 0 0 chr13 78293165 78293219 -41991093 - Lx6 LINE L1 -11 7449 7396 3 1182 510 239 190 9 chr13 78293220 78293431 -41990881 - L1M3 LINE L1 -1187 4953 4705 3 1182 218 32 32 0 chr13 78293435 78293466 -41990846 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 1182 7064 78 38 1 chr13 78293479 78294530 -41989782 - L1_Mus2 LINE L1 -1 6565 5480 3 1182 5416 80 23 4 chr13 78294527 78295272 -41989040 + L1_Mus2 LINE L1 4752 5510 -373 3 1182 345 226 147 0 chr13 78295267 78295369 -41988943 - L1M3 LINE L1 -1440 4703 4587 3 1182 386 227 252 0 chr13 78295482 78295601 -41988711 + B1_Mur2 SINE Alu 1 149 0 3 1182 1212 179 43 0 chr13 78295963 78296170 -41988142 - B3 SINE B2 0 216 1 3 1182 673 181 52 8 chr13 78296262 78296396 -41987916 + B1_Mur2 SINE Alu 2 141 -8 3 1182 290 206 143 41 chr13 78296942 78297089 -41987223 - RLTR15 LTR ERVK -20 339 178 3 1182 456 265 153 57 chr13 78297127 78297355 -41986957 - RLTR12B LTR ERVK -231 297 48 3 1182 22 70 0 0 chr13 78297887 78297930 -41986382 + AT_rich Low_complexity Low_complexity 1 43 0 3 1182 477 219 0 0 chr13 78297936 78298050 -41986262 + (TA)n Simple_repeat Simple_repeat 2 115 0 3 1182 432 263 182 0 chr13 78298664 78298801 -41985511 - B3A SINE B2 -36 162 1 3 1182 780 233 68 19 chr13 78299197 78299403 -41984909 - B3 SINE B2 0 216 1 3 1182 889 272 91 23 chr13 78299491 78299694 -41984618 + B4 SINE B4 6 215 -77 3 1182 231 36 0 0 chr13 78299694 78299722 -41984590 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3 1182 889 272 91 23 chr13 78299722 78299781 -41984531 + B4 SINE B4 216 284 -8 3 1182 291 28 0 0 chr13 78300062 78300098 -41984214 + (TG)n Simple_repeat Simple_repeat 1 36 0 3 1182 21 36 0 0 chr13 78300199 78300227 -41984085 + AT_rich Low_complexity Low_complexity 1 28 0 3 1182 28 0 0 0 chr13 78301846 78301874 -41982438 + AT_rich Low_complexity Low_complexity 1 28 0 3 1182 1142 70 6 0 chr13 78311116 78311273 -41973039 + (GGAA)n Simple_repeat Simple_repeat 1 158 0 3 1182 228 35 0 0 chr13 78312808 78312837 -41971475 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1182 22 0 0 0 chr13 78314708 78314730 -41969582 + AT_rich Low_complexity Low_complexity 1 22 0 4 1182 24 0 0 0 chr13 78315104 78315128 -41969184 + AT_rich Low_complexity Low_complexity 1 24 0 4 1182 357 24 0 0 chr13 78316197 78316239 -41968073 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1182 543 31 0 0 chr13 78316929 78316994 -41967318 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 1182 423 98 0 0 chr13 78317350 78317411 -41966901 + (CTA)n Simple_repeat Simple_repeat 1 61 0 4 1182 270 0 0 0 chr13 78317903 78317933 -41966379 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 4 1182 210 167 0 0 chr13 78318408 78318444 -41965868 + A-rich Low_complexity Low_complexity 1 36 0 4 1182 205 254 17 0 chr13 78320408 78320467 -41963845 + C-rich Low_complexity Low_complexity 5 64 0 4 1182 612 27 0 0 chr13 78321392 78321466 -41962846 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 1182 315 0 0 0 chr13 78323220 78323255 -41961057 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1182 450 0 0 0 chr13 78323725 78323775 -41960537 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1182 354 23 0 0 chr13 78323775 78323817 -41960495 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1182 207 0 0 0 chr13 78323824 78323847 -41960465 + (TTCTC)n Simple_repeat Simple_repeat 1 23 0 4 1182 492 136 0 0 chr13 78325132 78325220 -41959092 + (TTTC)n Simple_repeat Simple_repeat 4 91 0 4 1182 243 0 0 0 chr13 78326009 78326036 -41958276 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1182 210 37 0 0 chr13 78327948 78327975 -41956337 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1182 651 103 0 0 chr13 78333981 78334078 -41950234 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 1182 22 0 0 0 chr13 78335786 78335808 -41948504 + AT_rich Low_complexity Low_complexity 1 22 0 4 1182 243 79 0 0 chr13 78336099 78336137 -41948175 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1182 219 326 0 0 chr13 78337149 78337238 -41947074 + G-rich Low_complexity Low_complexity 1 89 0 4 1182 22 0 0 0 chr13 78337725 78337747 -41946565 + GC_rich Low_complexity Low_complexity 1 22 0 4 1182 24 0 0 0 chr13 78337880 78337904 -41946408 + GC_rich Low_complexity Low_complexity 1 24 0 4 1182 269 89 0 22 chr13 78337905 78337951 -41946361 + (AGGGGG)n Simple_repeat Simple_repeat 4 48 0 4 1182 224 170 19 0 chr13 78338012 78338065 -41946247 + (CCG)n Simple_repeat Simple_repeat 3 56 0 4 1182 214 299 0 75 chr13 78338147 78338241 -41946071 + C-rich Low_complexity Low_complexity 1 87 0 4 1182 26 30 0 0 chr13 78338320 78338353 -41945959 + GC_rich Low_complexity Low_complexity 1 33 0 4 1182 243 0 0 0 chr13 78338447 78338474 -41945838 + (CCCG)n Simple_repeat Simple_repeat 4 30 0 4 1182 217 167 0 23 chr13 78339109 78339152 -41945160 + CT-rich Low_complexity Low_complexity 3 44 0 4 1182 309 51 0 0 chr13 78339267 78339306 -41945006 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 1182 212 359 0 11 chr13 78339376 78339469 -41944843 + GA-rich Low_complexity Low_complexity 2 93 0 4 1182 226 267 0 0 chr13 78339377 78339422 -41944890 + polypurine Low_complexity Low_complexity 3 47 0 4 1182 840 62 16 8 chr13 78339471 78339600 -41944712 + (GGAGA)n Simple_repeat Simple_repeat 3 132 0 4 1182 369 0 0 0 chr13 78340052 78340093 -41944219 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1182 374 146 42 0 chr13 78340677 78340773 -41943539 + GA-rich Low_complexity Low_complexity 1 100 0 4 1182 513 0 0 0 chr13 78340794 78340851 -41943461 + (TGG)n Simple_repeat Simple_repeat 3 59 0 4 1182 351 60 0 0 chr13 78340851 78340901 -41943411 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1182 506 119 12 0 chr13 78341760 78341844 -41942468 + (GGAA)n Simple_repeat Simple_repeat 3 87 0 4 1182 396 0 0 0 chr13 78342140 78342184 -41942128 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1182 234 0 0 0 chr13 78346123 78346149 -41938163 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1182 423 184 165 9 chr13 78351850 78351965 -41932347 - RSINE1 SINE B4 -5 160 28 4 1182 357 24 0 0 chr13 78352988 78353030 -41931282 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1182 220 189 322 0 chr13 78353050 78353140 -41931172 + B1F SINE Alu 31 149 0 4 1182 21 36 0 0 chr13 78353651 78353679 -41930633 + AT_rich Low_complexity Low_complexity 1 28 0 4 1182 22 35 0 0 chr13 78355330 78355359 -41928953 + AT_rich Low_complexity Low_complexity 1 29 0 4 1182 423 0 0 0 chr13 78356304 78356351 -41927961 + (TTTTTG)n Simple_repeat Simple_repeat 1 47 0 4 1182 1094 65 0 0 chr13 78356364 78356502 -41927810 - B1_Mus1 SINE Alu -10 138 1 4 1182 297 0 0 0 chr13 78357830 78357863 -41926449 + (TATG)n Simple_repeat Simple_repeat 2 34 0 4 1182 12519 123 11 53 chr13 78357874 78359097 -41925215 - L1_Mus3 LINE L1 -1 6637 5415 4 1182 875 96 2 10 chr13 78359097 78359245 -41925067 - B1_Mus1 SINE Alu 0 149 3 4 1182 12519 123 11 53 chr13 78359245 78360996 -41923316 - L1_Mus3 LINE L1 -1 5414 3663 4 1182 3282 152 58 8 chr13 78360998 78361641 -41922671 - RMER17B LTR ERVK -3 955 281 4 1182 8299 45 5 4 chr13 78361641 78362731 -41921581 - L1Md_F2 LINE L1 -1 6581 5492 4 1182 354 83 0 0 chr13 78362713 78362761 -41921551 + L1_Mm LINE L1 1886 1933 -3950 4 1182 1858 108 45 0 chr13 78362761 78363047 -41921265 - RMER17B LTR ERVK -659 299 1 4 1182 15413 102 17 14 chr13 78363090 78364562 -41919750 - MusHAL1 LINE L1 -285 3068 1585 4 1182 6456 36 10 4 chr13 78364562 78365339 -41918973 - L1Md_F2 LINE L1 0 6582 5801 4 1182 15413 98 14 12 chr13 78365339 78366317 -41917995 - MusHAL1 LINE L1 -1769 1584 611 4 1182 807 276 112 16 chr13 78366601 78366966 -41917346 - MLT1C LTR MaLR -28 439 40 4 1182 3193 225 69 19 chr13 78367111 78367904 -41916408 + Lx9 LINE L1 6269 7101 -543 4 1182 303 214 0 0 chr13 78368488 78368558 -41915754 + CT-rich Low_complexity Low_complexity 1 70 0 4 1182 2343 256 158 6 chr13 78368558 78369528 -41914784 - RMER1B Other Other -1 1065 2 4 1182 521 43 0 0 chr13 78369529 78369599 -41914713 + B1_Mur4 SINE Alu 80 149 -1 4 1182 1120 68 0 27 chr13 78370733 78370871 -41913441 + B1_Mus1 SINE Alu 1 138 -10 4 1182 225 65 0 0 chr13 78370871 78370902 -41913410 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1182 1120 68 0 27 chr13 78370902 78370913 -41913399 + B1_Mus1 SINE Alu 139 146 -2 4 1182 1541 53 5 0 chr13 78371220 78371410 -41912902 + B2_Mm1a SINE B2 2 192 -1 4 1182 2610 95 53 8 chr13 78371617 78372010 -41912302 - L1_Mus3 LINE L1 -2 6636 6226 4 1182 1149 101 74 0 chr13 78372011 78372200 -41912112 + RMER17D LTR ERVK 1 203 -686 4 1182 4659 118 121 30 chr13 78372220 78373033 -41911279 - RMER17D LTR ERVK -2 887 1 4 1182 2158 98 0 0 chr13 78373033 78373320 -41910992 - L1_Mus3 LINE L1 -408 6230 5944 4 1182 287 195 49 49 chr13 78374250 78374331 -41909981 + B4A SINE B4 150 230 -62 4 1182 883 224 47 28 chr13 78374332 78374543 -41909769 + B3 SINE B2 2 216 0 4 1182 245 234 67 144 chr13 78374552 78374642 -41909670 + B4A SINE B4 210 292 0 4 1182 240 200 0 20 chr13 78374646 78374697 -41909615 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1182 31 26 0 0 chr13 78374743 78374781 -41909531 + AT_rich Low_complexity Low_complexity 1 38 0 4 1182 238 231 0 0 chr13 78375004 78375056 -41909256 - B1_Mus2 SINE Alu 0 147 96 4 1182 3022 100 2 5 chr13 78375057 78375478 -41908834 - Lx2 LINE L1 -413 6584 6165 4 1182 2866 89 48 0 chr13 78375478 78375870 -41908442 + RLTR10A LTR ERVK 1 411 0 4 1182 1613 120 20 24 chr13 78375872 78376119 -41908193 + RLTR10-int LTR ERVK 304 549 -1438 4 1182 263 361 28 16 chr13 78376202 78376455 -41907857 + RLTR10-int LTR ERVK 244 499 -6043 4 1182 1142 80 50 39 chr13 78376578 78376759 -41907553 + RLTR10-int LTR ERVK 810 992 -995 4 1182 581 298 25 21 chr13 78376852 78377167 -41907145 + RLTR10-int LTR ERVK 822 1063 -5479 4 1182 1877 156 37 7 chr13 78377177 78377508 -41906804 + RLTR10-int LTR ERVK 983 1244 -743 4 1182 2301 61 73 0 chr13 78377511 78377854 -41906458 - RLTR10A LTR ERVK -43 368 1 4 147 18140 163 116 25 chr13 78377854 78383139 -41901173 - Lx2 LINE L1 -827 6170 356 4 1183 519 206 0 0 chr13 78383141 78383233 -41901079 - Lx9 LINE L1 -419 7225 7134 4 1183 7262 76 2 27 chr13 78383231 78384218 -41900094 - L1_Mus2 LINE L1 0 6566 5605 4 1183 865 170 13 0 chr13 78384220 78384373 -41899939 - Lx9 LINE L1 -499 7145 6991 4 1183 10794 65 11 3 chr13 78384370 78385751 -41898561 + L1Md_F2 LINE L1 4195 5586 -297 4 1183 7725 60 12 6 chr13 78385751 78386741 -41897571 + L1Md_F2 LINE L1 5587 6582 0 4 1183 1919 162 12 18 chr13 78386749 78387082 -41897230 - Lx9 LINE L1 -644 7000 6670 4 1183 711 167 15 0 chr13 78387258 78387390 -41896922 - MTC LTR MaLR -287 134 1 4 1183 4200 121 77 38 chr13 78387533 78387644 -41896668 + Lx2B LINE L1 6232 6341 -659 4 1183 1569 48 0 11 chr13 78387644 78387835 -41896477 - B2_Mm1a SINE B2 -4 189 1 4 1183 4200 121 77 38 chr13 78387835 78388459 -41895853 + Lx2B LINE L1 6342 6996 -4 4 1183 382 282 71 102 chr13 78389059 78389256 -41895056 - RMER2 LTR ERV1 -4 563 373 4 1183 1069 316 9 0 chr13 78390276 78390621 -41893691 - MuRRS4-int LTR ERV1 -1088 3975 3628 4 1183 240 297 122 21 chr13 78392550 78392739 -41891573 - L1M2 LINE L1 -1147 4996 4789 4 1183 245 209 0 0 chr13 78392802 78392845 -41891467 - B1_Mur1 SINE Alu -7 142 100 4 1183 276 154 0 0 chr13 78392863 78392915 -41891397 + CT-rich Low_complexity Low_complexity 3 54 0 4 1183 263 222 25 66 chr13 78393457 78393646 -41890666 - L1MEg LINE L1 -5124 1052 841 4 1183 2368 113 34 8 chr13 78394622 78395006 -41889306 - BGLII LTR ERVK -27 394 1 4 1183 7338 85 9 6 chr13 78395253 78396384 -41887928 + L1_Mus3 LINE L1 5489 6637 -1 4 1183 192 40 0 0 chr13 78396426 78396451 -41887861 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1183 530 214 87 27 chr13 78396557 78396740 -41887572 - MER96B DNA hAT -134 283 90 4 1183 305 360 0 0 chr13 78396748 78396859 -41887453 + PB1D7 SINE Alu 2 112 -8 4 1183 1406 252 111 3 chr13 78396895 78397273 -41887039 - MTD LTR MaLR 0 419 1 4 1183 2290 72 3 25 chr13 78398198 78398524 -41885788 + L1_Mus2 LINE L1 6248 6566 0 4 1183 330 26 0 0 chr13 78398651 78398690 -41885622 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1183 1179 50 0 0 chr13 78398691 78398832 -41885480 - B1_Mus2 SINE Alu -6 141 1 4 1183 1218 212 4 0 chr13 78399347 78399578 -41884734 - Lx7 LINE L1 -1048 6648 6417 4 1183 547 309 55 16 chr13 78399623 78399876 -41884436 + Lx7 LINE L1 7049 7311 -385 4 1183 288 248 26 26 chr13 78399931 78400047 -41884265 + Lx7 LINE L1 7564 7679 -17 4 1183 261 302 125 0 chr13 78400168 78400264 -41884048 + RSINE1 SINE B4 15 122 -43 4 1183 456 19 0 0 chr13 78400277 78400330 -41883982 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1183 512 230 89 0 chr13 78400334 78400469 -41883843 - Lx7 LINE L1 -1 7695 7549 5 1183 33539 46 1 3 chr13 78400460 78405683 -41878629 + L1Md_T LINE L1 284 5590 -296 5 1183 8224 40 0 3 chr13 78405684 78406675 -41877637 + L1Md_T LINE L1 5592 6579 -6 5 1183 240 130 0 0 chr13 78406680 78406726 -41877586 + (A)n Simple_repeat Simple_repeat 1 46 0 5 1183 1917 195 136 44 chr13 78406726 78407300 -41877012 - Lx7 LINE L1 -122 7574 6948 5 1183 3629 223 57 16 chr13 78407305 78408195 -41876117 - Lx7 LINE L1 -1146 6550 5624 5 1183 2695 166 25 67 chr13 78408193 78408883 -41875429 - Lx7 LINE L1 -588 5292 4632 5 1183 6835 79 23 6 chr13 78408901 78410275 -41874037 - L1_Mus2 LINE L1 0 6566 5177 5 1183 207 0 0 0 chr13 78410275 78410298 -41874014 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1183 1080 79 0 0 chr13 78410298 78410437 -41873875 - B1_Mus1 SINE Alu -7 141 3 5 1183 5673 88 0 20 chr13 78410437 78410559 -41873753 - L1_Mus2 LINE L1 -707 5176 5056 5 1183 3118 9 0 0 chr13 78410559 78410942 -41873370 - L1Md_T LINE L1 0 6582 6234 5 1183 6736 14 0 0 chr13 78410942 78412090 -41872222 + L1Md_T LINE L1 5069 6216 -366 5 1183 2410 99 5 42 chr13 78412089 78412490 -41871822 - L1_Mus2 LINE L1 -813 5070 4685 5 1183 315 0 0 0 chr13 78413288 78413323 -41870989 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1183 585 0 0 0 chr13 78413624 78413689 -41870623 + (TCTA)n Simple_repeat Simple_repeat 1 65 0 5 1183 863 157 51 32 chr13 78413690 78413848 -41870464 - B2_Mm2 SINE B2 -33 162 2 5 1183 1182 53 0 0 chr13 78413859 78414009 -41870303 + (TCTCC)n Simple_repeat Simple_repeat 2 151 0 5 1183 586 157 16 0 chr13 78414012 78414133 -41870179 + CT-rich Low_complexity Low_complexity 3 125 0 5 1183 1263 66 0 0 chr13 78414141 78414307 -41870005 + (TTTC)n Simple_repeat Simple_repeat 4 169 0 5 1183 1076 185 102 24 chr13 78414944 78415199 -41869113 - Lx9 LINE L1 -441 7203 6929 5 1183 667 229 225 31 chr13 78415211 78415598 -41868714 + Lx7 LINE L1 7234 7695 -1 5 1183 4870 192 76 19 chr13 78415595 78417235 -41867077 - Lx6 LINE L1 -2091 3789 2642 5 1183 1299 222 53 3 chr13 78417247 78417603 -41866709 - Lx6 LINE L1 -6496 1232 859 5 1183 378 355 60 13 chr13 78417599 78417916 -41866396 - Lx6 LINE L1 -7169 559 228 5 1183 254 179 0 18 chr13 78418049 78418106 -41866206 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 5 1183 1355 219 10 83 chr13 78418106 78418514 -41865798 - Lx9 LINE L1 -753 6891 6514 5 1183 357 145 0 0 chr13 78418710 78418772 -41865540 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 1183 922 280 54 4 chr13 78418828 78419104 -41865208 - B4A SINE B4 -2 290 1 5 1183 815 254 29 24 chr13 78419448 78419658 -41864654 - B3 SINE B2 -5 211 1 5 1183 758 143 36 29 chr13 78420367 78420504 -41863808 - B1_Mus1 SINE Alu -5 143 6 5 1183 22 56 0 0 chr13 78420559 78420595 -41863717 + AT_rich Low_complexity Low_complexity 1 36 0 5 1183 795 175 92 12 chr13 78420746 78420919 -41863393 - B2_Mm2 SINE B2 -7 188 2 5 1183 779 191 203 22 chr13 78422047 78422229 -41862083 + B3 SINE B2 1 215 -1 5 1183 28 0 0 0 chr13 78422515 78422543 -41861769 + AT_rich Low_complexity Low_complexity 1 28 0 5 1183 1361 304 62 29 chr13 78423162 78423809 -41860503 - Lx9 LINE L1 -701 6943 6133 5 1183 428 258 64 56 chr13 78423894 78424128 -41860184 - Lx9 LINE L1 -1578 6066 5831 5 1183 959 97 0 7 chr13 78424128 78424274 -41860038 + (TCC)n Simple_repeat Simple_repeat 3 147 0 5 1183 1149 62 0 0 chr13 78424277 78424421 -41859891 - B1_Mus1 SINE Alu 0 148 5 5 1183 629 231 14 84 chr13 78424456 78424669 -41859643 - Lx9 LINE L1 -197 5650 5453 5 1183 272 284 0 12 chr13 78424899 78424981 -41859331 - ID4_ SINE ID -2 81 1 5 1183 477 0 0 0 chr13 78425124 78425177 -41859135 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 5 1183 3215 158 26 34 chr13 78425180 78425837 -41858475 - L1_Mur2 LINE L1 -1513 4364 3713 5 1183 8920 179 55 36 chr13 78426373 78429233 -41855079 - L1VL4 LINE L1 -2388 3755 820 5 1183 1127 293 7 18 chr13 78429445 78429723 -41854589 - B4A SINE B4 -14 278 4 5 1183 432 268 30 48 chr13 78430056 78430221 -41854091 + RNLTR23 LTR ERVK 481 642 0 5 1183 252 0 0 0 chr13 78430373 78430401 -41853911 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1183 1038 257 3 14 chr13 78430480 78430764 -41853548 + RNERVK23-int LTR ERVK 244 524 -7693 5 1183 323 372 0 10 chr13 78431101 78431294 -41853018 + RNERVK23-int LTR ERVK 852 1042 -7175 5 1183 5720 245 20 20 chr13 78431704 78433223 -41851089 + RNERVK23-int LTR ERVK 4443 5961 -2256 5 1183 445 270 6 38 chr13 78433225 78433383 -41850929 + RNERVK23-int LTR ERVK 7460 7612 -605 5 1183 904 242 20 12 chr13 78433390 78433641 -41850671 + RNERVK23-int LTR ERVK 7563 7815 -402 5 1183 428 268 31 50 chr13 78434369 78434530 -41849782 + RNLTR23 LTR ERVK 479 636 -6 5 1183 564 280 18 24 chr13 78435128 78435529 -41848783 - Lx8 LINE L1 -1598 6098 5671 5 1183 1312 330 37 40 chr13 78435525 78436132 -41848180 + Lx8 LINE L1 6722 7332 -141 5 1183 315 0 0 0 chr13 78436132 78436167 -41848145 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1183 1312 330 37 40 chr13 78436167 78436311 -41848001 + Lx8 LINE L1 7333 7471 -2 5 1183 2896 196 76 37 chr13 78437200 78437870 -41846442 + Lx7 LINE L1 6634 7327 -369 5 1183 288 70 0 0 chr13 78437870 78437913 -41846399 + (TATG)n Simple_repeat Simple_repeat 2 44 0 5 1183 2896 196 76 37 chr13 78437913 78437943 -41846369 + Lx7 LINE L1 7328 7361 -335 5 1183 28935 83 7 11 chr13 78437959 78442838 -41841474 + L1Md_A LINE L1 217 5291 -592 5 1183 4452 181 55 15 chr13 78442842 78443713 -41840599 - RMER17B LTR ERVK -52 906 1 5 1183 733 110 0 0 chr13 78443713 78443822 -41840490 + L1_Mur2 LINE L1 4047 4155 -1722 5 1183 213 65 0 0 chr13 78444126 78444157 -41840155 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1183 261 311 39 0 chr13 78445214 78445317 -41838995 + PB1D10 SINE Alu 1 107 -10 5 1183 24 32 0 0 chr13 78445317 78445348 -41838964 + AT_rich Low_complexity Low_complexity 1 31 0 5 1183 2415 236 63 16 chr13 78445407 78446045 -41838267 - Lx2B LINE L1 -10 6990 6323 5 1183 1753 195 58 15 chr13 78446507 78446907 -41837405 - MTC LTR MaLR -4 417 1 5 1183 966 182 109 51 chr13 78446980 78447322 -41836990 - RMER6B LTR ERVK -32 429 1 5 1183 772 231 85 0 chr13 78447539 78447738 -41836574 + B3 SINE B2 1 216 0 5 1183 407 341 16 16 chr13 78447934 78448062 -41836250 - B4A SINE B4 -156 136 9 5 1183 227 339 62 6 chr13 78448274 78448452 -41835860 - L1M2 LINE L1 -1112 5031 4844 5 1183 900 232 18 79 chr13 78448453 78448544 -41835768 + B3 SINE B2 2 83 -133 5 1183 5024 75 38 1 chr13 78448544 78449223 -41835089 - L1Md_F2 LINE L1 -12 6570 5867 5 1183 900 232 18 79 chr13 78449223 78449360 -41834952 + B3 SINE B2 84 216 0 5 1183 377 299 19 43 chr13 78449405 78449566 -41834746 - L1M3 LINE L1 -1350 4796 4640 5 1183 596 274 55 4 chr13 78449614 78449871 -41834441 - L1M3 LINE L1 -1612 4528 4259 5 1183 305 132 20 81 chr13 78449872 78449971 -41834341 + (TTAA)n Simple_repeat Simple_repeat 3 95 0 5 1183 459 248 111 49 chr13 78450001 78450226 -41834086 - L1M3 LINE L1 -1909 4237 3999 5 1183 795 237 94 15 chr13 78450242 78450443 -41833869 - MTC LTR MaLR -8 413 197 5 1183 1095 127 12 3 chr13 78450443 78450767 -41833545 + (TCCC)n Simple_repeat Simple_repeat 1 326 0 5 1183 315 65 0 0 chr13 78450809 78450855 -41833457 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 5 1183 6036 114 23 5 chr13 78450877 78452445 -41831867 - Lx LINE L1 0 6654 4989 5 1183 16614 116 28 9 chr13 78452446 78455923 -41828389 - Lx LINE L1 -2222 3661 133 5 1183 8439 152 53 36 chr13 78455926 78456939 -41827373 + RMER16-int LTR ERVK 2402 3402 -2004 5 1183 402 21 0 0 chr13 78456939 78456986 -41827326 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1183 8439 152 53 36 chr13 78456986 78457717 -41826595 + RMER16-int LTR ERVK 3403 4176 -1230 5 1183 369 295 19 34 chr13 78457725 78457957 -41826355 + ETnERV2-int LTR ERVK 6097 6227 -1179 5 1183 2181 109 47 60 chr13 78458371 78458752 -41825560 + RLTR9A2 LTR ERVK 1 376 -7 5 1183 387 304 21 35 chr13 78458753 78458896 -41825416 - Lx9 LINE L1 -397 7247 7107 5 1183 379 216 171 47 chr13 78458928 78459098 -41825214 + Lx9 LINE L1 7410 7600 -44 5 1183 385 379 55 19 chr13 78459184 78459440 -41824872 - L1M4c LINE L1 -4560 1824 1560 5 1183 7064 183 37 23 chr13 78459463 78459488 -41824824 - Lx5 LINE L1 0 7050 7029 5 1183 312 27 0 0 chr13 78459488 78459525 -41824787 + (TTAA)n Simple_repeat Simple_repeat 4 40 0 5 1183 7064 183 37 23 chr13 78459525 78460648 -41823664 - Lx5 LINE L1 -22 7028 5882 5 1183 3272 87 35 7 chr13 78460648 78460816 -41823496 - MT2C_Mm LTR ERVL -1 474 296 5 1183 675 37 0 0 chr13 78460816 78460898 -41823414 + (GAA)n Simple_repeat Simple_repeat 2 83 0 5 1183 3272 87 35 7 chr13 78460898 78461190 -41823122 - MT2C_Mm LTR ERVL -180 295 1 5 1183 7064 154 8 1 chr13 78461190 78461952 -41822360 - Lx5 LINE L1 -1169 5881 5109 5 1183 423 0 0 0 chr13 78462484 78462531 -41821781 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1183 268 333 123 45 chr13 78465521 78465658 -41818654 + MLT1A1 LTR MaLR 1 150 -215 5 1183 970 202 108 5 chr13 78465658 78465862 -41818450 - URR1B DNA MER1_type 0 225 1 5 1183 268 333 123 45 chr13 78465862 78465903 -41818409 + MLT1A1 LTR MaLR 151 192 -173 5 1183 296 262 7 0 chr13 78465920 78465998 -41818314 + MLT1A1 LTR MaLR 258 346 -62 5 1183 398 301 16 24 chr13 78466001 78466130 -41818182 + RSINE1 SINE B4 1 122 -170 5 1183 926 276 67 83 chr13 78466332 78466811 -41817501 + RMER13B LTR ERVK 372 842 -66 5 1183 6032 62 2 1 chr13 78466949 78467754 -41816558 - L1_Mus2 LINE L1 -201 6365 5588 5 1183 1449 72 16 78 chr13 78467756 78467998 -41816314 + L1_Mus2 LINE L1 6340 6566 0 5 1183 189 0 0 0 chr13 78468030 78468051 -41816261 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1183 6997 75 13 4 chr13 78468112 78469270 -41815042 - L1Md_F2 LINE L1 -6 6576 5409 5 1183 885 35 0 0 chr13 78469271 78469386 -41814926 + L1_Mm LINE L1 3892 4006 -1877 5 1183 356 272 64 0 chr13 78469518 78469643 -41814669 - Lx8 LINE L1 -1219 6254 6122 5 1183 745 257 69 0 chr13 78469801 78470003 -41814309 - B3 SINE B2 0 216 1 5 1183 709 311 60 60 chr13 78470306 78470743 -41813569 + L1MA6 LINE L1 5500 5936 -253 5 1183 22 56 0 0 chr13 78470938 78470974 -41813338 + AT_rich Low_complexity Low_complexity 1 36 0 5 1183 231 61 0 0 chr13 78471220 78471253 -41813059 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1183 514 63 25 0 chr13 78471320 78471399 -41812913 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 5 1183 540 295 30 15 chr13 78471404 78471538 -41812774 - ID_B1 SINE B4 -7 217 82 5 1183 220 207 97 65 chr13 78472238 78472300 -41812012 + PB1D9 SINE Alu 1 64 -56 5 1183 296 113 0 31 chr13 78472300 78472364 -41811948 + (TCTCTG)n Simple_repeat Simple_repeat 4 65 0 5 1183 3592 188 82 8 chr13 78472374 78473167 -41811145 - Lx3C LINE L1 -2 6974 6123 5 1183 21070 159 43 10 chr13 78473165 78474137 -41810175 - L1_Mur1 LINE L1 -142 5744 4740 5 1183 216 0 0 0 chr13 78474137 78474161 -41810151 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1183 21070 162 42 9 chr13 78474161 78477909 -41806403 - L1_Mur1 LINE L1 -1147 4739 866 5 1183 450 259 0 21 chr13 78478329 78478443 -41805869 + B1F2 SINE Alu 38 148 -1 5 1183 311 263 81 25 chr13 78478469 78478629 -41805683 - L1M3 LINE L1 -334 5849 5681 5 1183 320 237 67 67 chr13 78478629 78478733 -41805579 - B1_Mur1 SINE Alu -36 113 10 5 1183 313 288 63 63 chr13 78478631 78478757 -41805555 - ID_B1 SINE B4 -35 189 64 5 1183 284 264 0 40 chr13 78479172 78479247 -41805065 - L2b LINE L2 0 3375 3304 5 1183 24 77 0 0 chr13 78479628 78479680 -41804632 + AT_rich Low_complexity Low_complexity 1 52 0 6 1183 451 234 0 0 chr13 78479825 78479936 -41804376 + Lx3_Mus LINE L1 208 318 -6666 6 1183 28381 109 38 73 chr13 78479938 78482712 -41801600 + Lx3_Mus LINE L1 248 3359 -2527 6 1183 5888 22 7 7 chr13 78482712 78483410 -41800902 - L1Md_F3 LINE L1 -12 6572 5875 6 1183 28381 90 18 65 chr13 78483410 78483649 -41800663 + Lx3_Mus LINE L1 3360 3582 -3427 6 1183 282 308 123 41 chr13 78483649 78483669 -41800643 - B4A SINE B4 -71 221 91 6 1183 285 346 139 0 chr13 78483669 78483770 -41800542 - B1F2 SINE Alu -29 120 6 6 1183 28381 90 18 65 chr13 78483771 78487435 -41796877 + Lx3_Mus LINE L1 3583 7009 0 6 1183 261 335 129 28 chr13 78488237 78488415 -41795897 - L2 LINE L2 -396 3023 2828 6 1183 306 211 0 0 chr13 78489114 78489147 -41795165 + polypyrimidine Low_complexity Low_complexity 40 72 0 6 1183 1028 141 6 0 chr13 78489147 78489324 -41794988 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 6 1183 306 211 0 0 chr13 78489324 78489361 -41794951 + polypyrimidine Low_complexity Low_complexity 3 39 0 6 1183 376 270 61 38 chr13 78489804 78489935 -41794377 - L1M2 LINE L1 -1413 4730 4597 6 1183 721 216 129 5 chr13 78489972 78490181 -41794131 + L1_Mur2 LINE L1 4873 5107 -770 6 1183 435 316 31 0 chr13 78490184 78490409 -41793903 - L1_Mur3 LINE L1 -7302 410 179 6 1183 669 79 0 0 chr13 78490429 78490530 -41793782 + (GA)n Simple_repeat Simple_repeat 2 102 0 6 1183 22 35 0 0 chr13 78490791 78490820 -41793492 + AT_rich Low_complexity Low_complexity 1 29 0 6 1183 2458 161 88 12 chr13 78490849 78491340 -41792972 - RLTR12B LTR ERVK 0 528 1 6 1183 698 289 10 15 chr13 78491627 78491830 -41792482 - B3A SINE B2 0 216 14 6 1183 348 24 0 0 chr13 78491993 78492034 -41792278 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 6 1183 37405 33 3 7 chr13 78492062 78498455 -41785857 - L1Md_T LINE L1 0 6582 214 6 1183 24 0 0 0 chr13 78498546 78498570 -41785742 + AT_rich Low_complexity Low_complexity 1 24 0 6 1183 572 330 50 41 chr13 78498644 78499195 -41785117 - L1M5 LINE L1 -2713 3433 2880 6 1183 21 71 0 0 chr13 78499271 78499313 -41784999 + AT_rich Low_complexity Low_complexity 1 42 0 6 1183 593 200 50 0 chr13 78499423 78499563 -41784749 - Lx9 LINE L1 -199 7445 7299 6 1183 565 296 120 26 chr13 78499568 78499994 -41784318 - L1M5 LINE L1 -3395 2751 2286 6 1183 826 246 77 5 chr13 78500022 78500218 -41784094 - B3 SINE B2 -6 210 1 1 1183 232 175 35 17 chr13 78500297 78500355 -41783957 + (TCTCTG)n Simple_repeat Simple_repeat 4 62 0 2 1183 387 60 0 0 chr13 78500357 78500407 -41783905 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1183 378 0 0 0 chr13 78500409 78500451 -41783861 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1183 526 284 94 35 chr13 78500559 78500818 -41783494 - L1MA4 LINE L1 -322 5975 5702 5 1183 351 0 0 0 chr13 78500875 78500914 -41783398 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1183 698 326 141 12 chr13 78501110 78501597 -41782715 - MER21B LTR ERV1 -119 744 195 7 1183 1799 165 29 58 chr13 78501628 78502039 -41782273 + RMER17C LTR ERVK 12 410 0 8 1183 239 298 0 0 chr13 78502396 78502443 -41781869 + MER2 DNA MER2_type 1 47 -298 9 1183 371 310 168 0 chr13 78502461 78502574 -41781738 + B1F1 SINE Alu 2 133 -16 1 1183 356 40 20 0 chr13 78502577 78502627 -41781685 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1 1183 504 0 0 0 chr13 78502965 78503021 -41781291 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 1 1183 728 289 31 7 chr13 78503068 78503259 -41781053 - B4 SINE B4 -7 217 7 1 1183 473 282 107 5 chr13 78503324 78503520 -41780792 - B3 SINE B2 0 216 1 1 1183 1364 231 56 35 chr13 78504221 78504429 -41779883 - ORR1C2 LTR MaLR 0 384 184 1 1183 279 0 0 0 chr13 78504429 78504460 -41779852 + (GA)n Simple_repeat Simple_repeat 2 32 0 1 1183 1364 231 56 35 chr13 78504460 78504627 -41779685 - ORR1C2 LTR MaLR -201 183 1 1 1183 379 293 61 24 chr13 78505009 78505222 -41779090 - L1MEc LINE L1 -5521 879 659 1 1183 306 276 39 23 chr13 78505917 78506047 -41778265 - L1MEc LINE L1 -6171 229 98 1 1183 225 179 0 0 chr13 78506973 78507012 -41777300 + Charlie14a DNA MER1_type 1125 1163 -1 1 1183 241 286 102 63 chr13 78506981 78507108 -41777204 - MER103 DNA DNA -1 165 34 1 1183 531 136 135 8 chr13 78507112 78507245 -41777067 - Lx3A LINE L1 -5 6976 6827 2 1183 384 289 28 69 chr13 78507547 78507763 -41776549 - MER121 Unknown Unknown -156 256 50 2 1183 4567 160 48 11 chr13 78508260 78509250 -41775062 - L1_Mur2 LINE L1 -2066 3811 2786 2 1183 26 30 0 0 chr13 78509253 78509286 -41775026 + AT_rich Low_complexity Low_complexity 1 33 0 2 1183 8121 105 19 13 chr13 78509288 78510521 -41773791 - Lx3A LINE L1 -4 6977 5737 2 1183 2059 99 3 12 chr13 78510525 78510851 -41773461 + L1_Mur1 LINE L1 5152 5474 -412 2 1183 3277 180 90 7 chr13 78510848 78511548 -41772764 - L1_Mur2 LINE L1 -3061 2819 2064 2 1183 345 24 0 0 chr13 78511548 78511590 -41772722 + (TG)n Simple_repeat Simple_repeat 2 43 0 2 1183 3277 180 90 7 chr13 78511590 78511708 -41772604 - L1_Mur2 LINE L1 -3817 2063 1934 2 1183 242 196 0 38 chr13 78512046 78512099 -41772213 - LTR85a LTR Gypsy? -306 396 346 2 1184 4435 16 0 0 chr13 78513047 78513540 -41770772 + MT2_Mm LTR ERVL 1 493 0 2 1184 6070 14 31 0 chr13 78513540 78514607 -41769705 + MERVL-int LTR ERVL 1 1100 -4385 2 1184 25103 20 0 0 chr13 78514605 78517575 -41766737 + MERVL-int LTR ERVL 2390 5360 -125 2 1184 369 191 46 35 chr13 78517575 78517662 -41766650 + ORR1A3-int LTR MaLR 553 640 -1323 2 1184 302 0 0 0 chr13 78517662 78517700 -41766612 + MERVL-int LTR ERVL 5448 5485 0 2 1184 4435 16 0 0 chr13 78517700 78518193 -41766119 + MT2_Mm LTR ERVL 1 493 0 2 1184 296 191 93 68 chr13 78518662 78518780 -41765532 - Lx8 LINE L1 0 7473 7353 3 1184 608 242 265 71 chr13 78518852 78519244 -41765068 - RMER13A LTR ERVK -391 469 2 3 1184 240 161 48 0 chr13 78519270 78519332 -41764980 - L1MA9 LINE L1 -7 6305 6241 3 1184 854 251 109 18 chr13 78520641 78520981 -41763331 - L1MA4 LINE L1 -400 5900 5530 3 1184 387 0 0 0 chr13 78521002 78521045 -41763267 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1184 2022 189 93 0 chr13 78521049 78521466 -41762846 + RLTR28 LTR ERVL 3 458 -66 3 1184 267 244 186 170 chr13 78521925 78522113 -41762199 - B4A SINE B4 -101 191 1 3 1184 211 337 32 0 chr13 78523178 78523273 -41761039 - L2 LINE L2 -339 3080 2983 3 1184 241 309 24 0 chr13 78523463 78523547 -41760765 + L1MC4 LINE L1 6920 7005 -1037 3 1184 3217 172 32 48 chr13 78523911 78524559 -41759753 - RLTR26 LTR ERVK 0 642 5 3 1184 506 289 87 67 chr13 78524654 78524966 -41759346 + L1MC4 LINE L1 7201 7518 -524 3 1184 2262 224 9 40 chr13 78524988 78525568 -41758744 + Lx LINE L1 560 1121 -5536 4 1184 6748 103 34 113 chr13 78525559 78526522 -41757790 + MusHAL1 LINE L1 52 896 -1816 4 1184 241 68 22 22 chr13 78526522 78526567 -41757745 + (CAA)n Simple_repeat Simple_repeat 2 46 0 4 1184 6748 103 34 113 chr13 78526567 78527066 -41757246 + MusHAL1 LINE L1 897 1396 -1316 4 1184 6800 48 1 3 chr13 78527066 78527965 -41756347 + L1Md_F2 LINE L1 4690 5586 -297 4 1184 7784 47 14 5 chr13 78527965 78528940 -41755372 + L1Md_F2 LINE L1 5587 6570 -12 4 1184 466 138 35 0 chr13 78528940 78529011 -41755301 + L1_Mm LINE L1 2587 2657 -3226 4 1184 4144 75 2 2 chr13 78529008 78529689 -41754623 - L1_Mus1 LINE L1 -618 5949 5268 4 1184 4492 70 12 3 chr13 78529689 78530274 -41754038 + L1_Mus1 LINE L1 5978 6567 0 4 1184 11297 142 17 7 chr13 78530274 78530785 -41753527 + L1_Mm LINE L1 2644 3171 -2712 4 1184 279 0 0 0 chr13 78530785 78530816 -41753496 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 4 1184 11297 142 17 7 chr13 78530816 78532353 -41751959 + L1_Mm LINE L1 3172 4711 -1172 4 1184 4642 100 4 30 chr13 78532355 78533080 -41751232 + L1_Mus3 LINE L1 5767 6472 -166 4 1184 4703 116 104 3 chr13 78533127 78533887 -41750425 + L1_Mus3 LINE L1 5802 6638 0 4 1184 23222 154 16 19 chr13 78533889 78536269 -41748043 + Lx LINE L1 1108 3489 -2394 4 1184 311 42 42 0 chr13 78536269 78536317 -41747995 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 4 1184 23222 163 18 21 chr13 78536317 78536479 -41747833 + Lx LINE L1 3490 3628 -2255 4 1184 450 0 0 0 chr13 78536479 78536529 -41747783 + (TA)n Simple_repeat Simple_repeat 2 51 0 5 1184 23222 163 18 21 chr13 78536529 78538645 -41745667 + Lx LINE L1 3629 5791 -92 4 1184 1220 54 0 0 chr13 78538645 78538792 -41745520 + B1_Mus2 SINE Alu 1 147 0 5 1184 23222 131 20 44 chr13 78538792 78539670 -41744642 + Lx LINE L1 5792 6650 -4 4 1184 282 304 53 46 chr13 78539793 78540096 -41744216 + L1MC4 LINE L1 7738 8042 0 5 1184 865 304 96 3 chr13 78541176 78541499 -41742813 + Lx8 LINE L1 6193 6545 -928 5 1184 2211 175 50 12 chr13 78541501 78541900 -41742412 - MTC LTR MaLR -2 419 6 5 1184 595 361 126 4 chr13 78541925 78542403 -41741909 + Lx8 LINE L1 6561 7096 -377 5 1184 341 77 25 37 chr13 78542474 78542555 -41741757 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 5 1184 342 338 0 7 chr13 78545183 78545323 -41738989 - HAL1-2a_MD LINE L1 -533 2491 2353 5 1184 21 0 0 0 chr13 78545911 78545932 -41738380 + AT_rich Low_complexity Low_complexity 1 21 0 5 1184 294 290 43 11 chr13 78546617 78546711 -41737601 - ID_B1 SINE B4 -112 112 16 5 1184 318 241 0 0 chr13 78546653 78546711 -41737601 - ID4 SINE ID -10 73 16 5 1184 745 282 35 5 chr13 78547516 78547719 -41736593 - B3 SINE B2 -4 212 4 6 1184 578 14 14 0 chr13 78548514 78548585 -41735727 + (TC)n Simple_repeat Simple_repeat 2 73 0 6 1184 284 0 28 0 chr13 78549264 78549300 -41735012 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1184 6867 166 74 8 chr13 78549419 78550956 -41733356 - Lx2 LINE L1 -19 6978 5371 6 1184 6262 132 8 14 chr13 78550955 78552124 -41732188 - MusHAL1 LINE L1 -1484 1228 67 6 1184 1750 215 27 22 chr13 78552118 78552569 -41731743 - L1VL4 LINE L1 -5445 857 405 6 1184 231 167 0 0 chr13 78552624 78552666 -41731646 + (CAGA)n Simple_repeat Simple_repeat 2 43 0 6 1184 4851 33 0 0 chr13 78552900 78553470 -41730842 + L1Md_A LINE L1 6012 6581 -1 6 1184 2358 140 20 52 chr13 78553695 78554102 -41730210 - ORR1B1 LTR MaLR 0 394 1 6 1184 5054 184 7 20 chr13 78554102 78555084 -41729228 - ORR1B1-int LTR MaLR 0 1509 541 6 1184 266 211 0 0 chr13 78555078 78555135 -41729177 - ORR1D-int LTR MaLR -223 1147 1091 6 1184 779 119 8 0 chr13 78555171 78555297 -41729015 + (GA)n Simple_repeat Simple_repeat 2 128 0 7 1184 180 176 0 0 chr13 78555368 78555402 -41728910 + (CG)n Simple_repeat Simple_repeat 1 34 0 7 1184 288 0 0 0 chr13 78555402 78555434 -41728878 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1184 218 81 27 0 chr13 78555569 78555606 -41728706 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 7 1184 240 263 105 0 chr13 78555608 78555665 -41728647 - ID4_ SINE ID -9 74 12 7 1184 241 349 119 0 chr13 78555655 78555764 -41728548 - B1F1 SINE Alu -26 123 2 7 1184 255 221 0 0 chr13 78556376 78556462 -41727850 + (CCAA)n Simple_repeat Simple_repeat 2 87 0 7 1184 203 273 18 0 chr13 78556730 78556785 -41727527 - L2a LINE L2 -16 3410 3355 7 1184 352 302 41 64 chr13 78557357 78557561 -41726751 + MLT1H LTR MaLR 45 209 -280 7 1184 28212 111 12 17 chr13 78558012 78563950 -41720362 + L1_Mus2 LINE L1 667 6566 0 7 1184 1151 89 0 0 chr13 78564410 78564556 -41719756 + B1_Mus2 SINE Alu 2 147 0 8 1184 247 150 0 104 chr13 78568174 78568241 -41716071 + T-rich Low_complexity Low_complexity 1 60 0 8 1184 1149 76 7 0 chr13 78568241 78568386 -41715926 - B1_Mus2 SINE Alu 0 147 2 8 1184 189 338 68 95 chr13 78570396 78570543 -41713769 + MIR SINE MIR 111 253 -9 8 1184 909 287 151 12 chr13 78570850 78571188 -41713124 - RMER1A Other Other -460 570 186 8 1184 13268 125 36 11 chr13 78571189 78571312 -41713000 - L1_Mm LINE L1 -1431 4452 4344 8 1184 2519 75 3 20 chr13 78571312 78571667 -41712645 - L1Md_F2 LINE L1 0 6582 6234 8 1184 13268 125 36 11 chr13 78571667 78573913 -41710399 - L1_Mm LINE L1 -1540 4343 2025 8 1184 6275 204 21 24 chr13 78573916 78575266 -41709046 - Lx5 LINE L1 -109 6941 5596 8 1184 924 124 17 15 chr13 78575279 78575458 -41708854 + L1_Mur2 LINE L1 3316 3494 -420 8 1184 434 76 0 29 chr13 78575458 78575526 -41708786 + (GAAA)n Simple_repeat Simple_repeat 2 67 0 8 1184 3660 217 75 8 chr13 78575581 78575778 -41708534 - L1_Mur3 LINE L1 -3025 2855 2637 9 1184 387 0 0 0 chr13 78575778 78575821 -41708491 + (TG)n Simple_repeat Simple_repeat 2 44 0 9 1184 3660 217 75 8 chr13 78575821 78576709 -41707603 - L1_Mur3 LINE L1 -3244 2636 1699 9 1184 546 181 19 0 chr13 78576729 78576834 -41707478 - B1_Mus2 SINE Alu 0 147 41 9 1184 296 293 9 57 chr13 78576762 78576867 -41707445 - MT2B LTR ERVL -337 264 165 9 1184 258 106 0 0 chr13 78577018 78577065 -41707247 + (CAAA)n Simple_repeat Simple_repeat 3 49 0 9 1184 1939 153 92 6 chr13 78577139 78577487 -41706825 + ORR1B1 LTR MaLR 1 378 -16 9 1184 450 0 0 0 chr13 78579058 78579108 -41705204 + (TA)n Simple_repeat Simple_repeat 2 51 0 9 1184 456 338 138 17 chr13 78579128 78579367 -41704945 - B4 SINE B4 -14 278 11 9 1184 261 0 0 0 chr13 78580649 78580678 -41703634 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1184 443 252 158 32 chr13 78580692 78580806 -41703506 + Lx7 LINE L1 7403 7545 -151 9 1184 200 34 0 33 chr13 78580806 78580836 -41703476 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1 1184 443 252 158 32 chr13 78580836 78580967 -41703345 + Lx7 LINE L1 7546 7678 -18 9 1184 889 48 8 0 chr13 78581947 78582073 -41702239 + L1Md_F2 LINE L1 6456 6582 0 1 1184 3661 97 8 8 chr13 78582322 78582850 -41701462 + Lx LINE L1 6123 6650 -4 1 1184 303 181 0 0 chr13 78582861 78582933 -41701379 + A-rich Low_complexity Low_complexity 1 72 0 1 1184 27 0 0 0 chr13 78584583 78584610 -41699702 + AT_rich Low_complexity Low_complexity 1 27 0 1 1184 21 0 0 0 chr13 78585013 78585034 -41699278 + AT_rich Low_complexity Low_complexity 1 21 0 1 1184 694 345 67 65 chr13 78587295 78587773 -41696539 - MLT1D LTR MaLR 0 505 27 1 1184 204 40 0 0 chr13 78587967 78587992 -41696320 + (TATG)n Simple_repeat Simple_repeat 2 26 0 1 1184 462 36 0 0 chr13 78590688 78590744 -41693568 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1184 517 211 22 7 chr13 78591946 78592223 -41692089 + GA-rich Low_complexity Low_complexity 1 281 0 1 1184 23 54 0 0 chr13 78592778 78592815 -41691497 + AT_rich Low_complexity Low_complexity 1 37 0 1 1184 410 308 270 0 chr13 78592847 78593006 -41691306 - B4 SINE B4 0 292 91 1 1184 417 241 174 41 chr13 78593284 78593479 -41690833 - ID_B1 SINE B4 0 224 4 1 1184 183 80 0 0 chr13 78594077 78594102 -41690210 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1184 2324 136 41 8 chr13 78594705 78595099 -41689213 - MTB_Mm LTR MaLR 0 407 1 1 1184 807 221 125 37 chr13 78595839 78596167 -41688145 - L1MB3 LINE L1 -3 6180 5824 1 1184 854 144 7 21 chr13 78596553 78596695 -41687617 + B1_Mur3 SINE Alu 8 147 -2 1 1184 407 346 27 67 chr13 78597144 78597367 -41686945 - MIRb SINE MIR -48 220 7 1 1184 223 336 56 48 chr13 78599152 78599277 -41685035 + MIRc SINE MIR 36 161 -107 1 1184 767 279 122 8 chr13 78599591 78599844 -41684468 - B4 SINE B4 -5 287 6 1 1184 974 255 9 0 chr13 78600106 78600318 -41683994 + B3 SINE B2 2 215 -1 1 1184 21 36 0 0 chr13 78600510 78600538 -41683774 + AT_rich Low_complexity Low_complexity 1 28 0 1 1184 1471 65 0 5 chr13 78600610 78600811 -41683501 - L1_Mus2 LINE L1 0 6566 6367 1 1184 19330 7 0 1 chr13 78600998 78603286 -41681026 + L1Md_A LINE L1 3301 5585 -298 1 1184 8927 10 0 0 chr13 78603287 78604283 -41680029 + L1Md_A LINE L1 5587 6582 0 1 1184 183 42 0 0 chr13 78604299 78604323 -41679989 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1184 277 113 56 0 chr13 78605484 78605555 -41678757 + (TCTG)n Simple_repeat Simple_repeat 2 76 0 1 1184 285 29 0 0 chr13 78605630 78605664 -41678648 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1184 6819 123 14 5 chr13 78606037 78607416 -41676896 + Lx LINE L1 5262 6654 0 1 1184 614 243 281 14 chr13 78607471 78607692 -41676620 - MER2 DNA MER2_type -6 339 60 1 1184 562 271 32 19 chr13 78608418 78608576 -41675736 - MLT1A0 LTR MaLR -1 364 205 1 1184 311 315 90 58 chr13 78608744 78608899 -41675413 - ORR1E LTR MaLR -175 184 25 1 1184 322 236 89 9 chr13 78608924 78609031 -41675281 - MLT1A0 LTR MaLR -162 203 83 1 1184 495 341 14 19 chr13 78609794 78610003 -41674309 - MIR SINE MIR -6 256 49 1 1184 252 0 0 0 chr13 78610671 78610699 -41673613 + (TA)n Simple_repeat Simple_repeat 2 29 0 1 1184 2183 184 39 29 chr13 78610728 78611370 -41672942 + RLTR31_Mm LTR ERVK 1 561 0 1 1184 1255 41 0 0 chr13 78611504 78611651 -41672661 + B1_Mus2 SINE Alu 1 147 0 1 1184 198 0 0 0 chr13 78611651 78611673 -41672639 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1184 450 0 0 0 chr13 78611710 78611760 -41672552 + (A)n Simple_repeat Simple_repeat 1 50 0 1 1184 1355 163 42 131 chr13 78611813 78612216 -41672096 + RMER16 LTR ERVK 1 533 0 1 1184 6450 142 23 3 chr13 78612369 78613954 -41670358 - Lx LINE L1 -9 6645 5038 1 1184 1262 271 56 29 chr13 78614083 78614497 -41669815 + Tigger6a DNA MER2_type 2 426 -657 1 1184 1202 253 102 24 chr13 78614616 78615029 -41669283 + Tigger6a DNA MER2_type 616 1060 -23 1 1184 4672 45 0 3 chr13 78616037 78616611 -41667701 - L1Md_F2 LINE L1 -11 6571 6000 1 1184 1488 266 71 3 chr13 78617851 78618232 -41666080 + MTD LTR MaLR 13 419 0 1 1184 468 308 47 88 chr13 78618325 78618667 -41665645 + L1MEf LINE L1 758 1085 -5115 1 1184 396 0 0 0 chr13 78618888 78618932 -41665380 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1184 792 311 50 15 chr13 78619065 78619326 -41664986 + B4A SINE B4 19 288 -4 1 1184 1434 150 104 7 chr13 78619491 78619780 -41664532 + Lx LINE L1 6338 6654 0 1 1184 573 120 0 0 chr13 78620937 78621029 -41663283 + (TCTA)n Simple_repeat Simple_repeat 2 93 0 1 1184 419 0 20 0 chr13 78624493 78624544 -41659768 + (TTTTG)n Simple_repeat Simple_repeat 2 53 0 1 1184 879 132 15 0 chr13 78624544 78624680 -41659632 - B1_Mus1 SINE Alu -9 139 2 1 1184 1808 184 113 3 chr13 78624720 78625075 -41659237 - ORR1B1 LTR MaLR 0 394 1 1 1184 209 159 0 22 chr13 78625268 78625313 -41658999 + GA-rich Low_complexity Low_complexity 1 44 0 1 1184 1163 80 77 39 chr13 78625699 78625881 -41658431 - B2_Mm2 SINE B2 -6 189 1 1 1184 2300 206 60 65 chr13 78625886 78626498 -41657814 - RMER1B Other Other -1 1065 457 1 1184 414 229 44 35 chr13 78626468 78626581 -41657731 + RMER1B Other Other 394 507 -559 1 1184 274 156 5 101 chr13 78626627 78626693 -41657619 + RMER1A Other Other 33 85 -945 1 1184 3095 37 48 0 chr13 78627240 78627618 -41656694 - MTA_Mm LTR MaLR 0 396 1 1 1184 4852 88 6 3 chr13 78628010 78628679 -41655633 - L1_Mus3 LINE L1 -9 6629 5959 1 1184 335 156 0 0 chr13 78628679 78628743 -41655569 - MusHAL1 LINE L1 -1904 808 745 1 1184 2589 142 41 4 chr13 78628745 78629206 -41655106 - L1_Mm LINE L1 -210 5673 5196 1 1184 5222 100 44 0 chr13 78629198 78630146 -41654166 + L1VL4 LINE L1 774 1763 -1796 1 1184 14600 20 1 0 chr13 78630166 78631945 -41652367 + L1Md_T LINE L1 3807 5586 -297 1 1184 8567 30 0 0 chr13 78631945 78632941 -41651371 + L1Md_T LINE L1 5587 6582 0 1 1184 35 54 0 0 chr13 78632960 78633016 -41651296 + AT_rich Low_complexity Low_complexity 1 56 0 1 1184 250 251 50 26 chr13 78633145 78633222 -41651090 - PB1D10 SINE Alu -13 114 27 1 1184 932 89 0 0 chr13 78633253 78633377 -41650935 - B1_Mm SINE Alu -21 126 3 1 1184 439 200 17 95 chr13 78633277 78633393 -41650919 - MT2B LTR ERVL -344 257 151 1 1184 534 16 0 0 chr13 78634182 78634245 -41650067 + (GA)n Simple_repeat Simple_repeat 2 64 0 1 1184 563 225 26 26 chr13 78634263 78634418 -41649894 - L1Md_F LINE L1 -5795 724 570 1 1184 504 32 0 0 chr13 78634685 78634747 -41649565 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1184 369 0 0 0 chr13 78634747 78634787 -41649525 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 1184 1999 162 73 24 chr13 78635348 78635720 -41648592 - ORR1B1 LTR MaLR -4 390 1 1 1184 389 343 64 54 chr13 78636213 78636509 -41647803 - MLT1D LTR MaLR -126 379 81 1 1184 22 70 0 0 chr13 78636698 78636741 -41647571 + AT_rich Low_complexity Low_complexity 1 43 0 1 1184 450 0 0 0 chr13 78638785 78638835 -41645477 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1184 596 298 114 76 chr13 78638962 78639224 -41645088 - B4 SINE B4 -13 279 8 1 1184 324 0 0 0 chr13 78639274 78639310 -41645002 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1184 590 231 85 0 chr13 78642201 78642331 -41641981 - B1_Mur1 SINE Alu -8 141 1 1 1184 714 194 14 0 chr13 78642615 78642754 -41641558 + ORR1C1 LTR MaLR 1 141 -237 1 18 4102 119 17 8 chr13 78642756 78643389 -41640923 - Lx LINE L1 -2 6652 6014 1 1185 1292 164 53 4 chr13 78643389 78643653 -41640659 - L1_Mm LINE L1 -585 5298 5022 1 1185 4501 144 24 0 chr13 78643653 78644437 -41639875 + L1_Mm LINE L1 4263 5065 -818 1 1185 1042 183 45 65 chr13 78644441 78644686 -41639626 + ORR1C1 LTR MaLR 139 378 0 1 1185 1044 230 9 9 chr13 78644784 78644995 -41639317 - B3 SINE B2 -5 211 1 1 1185 822 287 106 63 chr13 78645620 78645970 -41638342 + MTE2a LTR MaLR 1 365 -14 1 1185 180 264 127 68 chr13 78646692 78646810 -41637502 + MIR3 SINE MIR 11 135 -73 1 1185 627 81 0 0 chr13 78647445 78647544 -41636768 + (TC)n Simple_repeat Simple_repeat 2 100 0 1 1185 419 341 31 70 chr13 78647598 78647825 -41636487 - B4A SINE B4 -58 234 17 1 1185 982 144 0 11 chr13 78648153 78648335 -41635977 + CT-rich Low_complexity Low_complexity 1 180 0 1 1185 246 254 15 15 chr13 78650377 78650445 -41633867 - MLT1A LTR MaLR 0 408 341 1 1185 491 334 64 7 chr13 78650476 78650682 -41633630 + B4A SINE B4 58 291 -1 1 1185 246 32 0 0 chr13 78650703 78650734 -41633578 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1185 249 98 0 0 chr13 78650755 78650796 -41633516 + (CAGA)n Simple_repeat Simple_repeat 2 42 0 1 1185 361 338 47 76 chr13 78650851 78651141 -41633171 - MLT1A LTR MaLR -85 280 4 1 1185 2044 119 21 59 chr13 78651206 78651546 -41632766 - ORR1A2 LTR MaLR 0 327 1 1 1185 257 303 66 0 chr13 78652293 78652369 -41631943 + MLT1D LTR MaLR 30 110 -255 1 1185 227 279 16 0 chr13 78652370 78652431 -41631881 + MLT1D LTR MaLR 291 352 -56 1 1185 352 267 9 45 chr13 78652435 78652545 -41631767 + PB1D9 SINE Alu 5 110 -10 1 1185 37 0 0 0 chr13 78652545 78652582 -41631730 + AT_rich Low_complexity Low_complexity 1 37 0 1 1185 6903 78 23 2 chr13 78652582 78653784 -41630528 - L1_Mus1 LINE L1 0 6567 5345 1 1185 335 133 33 0 chr13 78653779 78653839 -41630473 + L1_Mm LINE L1 5318 5379 -504 1 1185 2465 74 3 0 chr13 78654012 78654338 -41629974 - L1_Mus1 LINE L1 -1 6566 6240 1 1185 462 18 0 0 chr13 78654465 78654520 -41629792 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1185 285 260 40 14 chr13 78654582 78654656 -41629656 - B3A SINE B2 -121 77 2 1 1185 363 176 15 0 chr13 78654717 78654785 -41629527 + MLT1D LTR MaLR 430 498 -7 1 1185 1630 39 0 5 chr13 78656404 78656611 -41627701 + L1Md_F2 LINE L1 6377 6582 0 1 1185 1411 47 20 31 chr13 78656624 78656820 -41627492 + B2_Mm2 SINE B2 2 195 0 1 1185 238 254 200 14 chr13 78656890 78657030 -41627282 - L1MCb LINE L1 -5150 1601 1436 1 1185 317 337 216 48 chr13 78657077 78657573 -41626739 - L1MCb LINE L1 -5401 1350 772 1 1185 279 267 0 72 chr13 78657975 78658072 -41626240 - L1MCb LINE L1 -5634 411 322 1 1185 213 65 0 0 chr13 78658072 78658103 -41626209 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1185 258 32 0 0 chr13 78658203 78658234 -41626078 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1185 764 245 202 24 chr13 78658451 78658698 -41625614 - B4A SINE B4 -1 291 1 2 1185 243 354 21 38 chr13 78658823 78659058 -41625254 - L1M5 LINE L1 -2414 3732 3502 2 1185 728 142 296 0 chr13 78662669 78662831 -41621481 + B3 SINE B2 2 211 -5 2 1185 28 71 0 0 chr13 78662888 78662944 -41621368 + AT_rich Low_complexity Low_complexity 1 56 0 2 1185 320 337 0 52 chr13 78663522 78663619 -41620693 - B1F SINE Alu -55 94 3 2 1185 480 35 0 0 chr13 78663911 78663969 -41620343 + (TG)n Simple_repeat Simple_repeat 1 58 0 2 1185 284 341 71 21 chr13 78663986 78664127 -41620185 - Charlie4z DNA MER1_type 0 167 20 2 1185 30 27 0 0 chr13 78665919 78665956 -41618356 + AT_rich Low_complexity Low_complexity 1 37 0 2 1185 1533 207 132 55 chr13 78666040 78666494 -41617818 - Lx2B LINE L1 -19 6981 6493 2 1185 594 0 0 0 chr13 78667961 78668027 -41616285 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1185 876 127 0 0 chr13 78668418 78668560 -41615752 + (TCCC)n Simple_repeat Simple_repeat 3 144 0 2 1185 7876 94 16 0 chr13 78669045 78670363 -41613949 + L1VL1 LINE L1 217 1555 -4328 2 1185 30425 93 4 5 chr13 78670380 78675526 -41608786 + L1Md_F2 LINE L1 449 5586 -297 2 1185 7523 71 5 1 chr13 78675526 78676504 -41607808 + L1Md_F2 LINE L1 5587 6568 -14 2 1185 7137 102 0 0 chr13 78676511 78677613 -41606699 + L1_Mm LINE L1 1549 2650 -3233 2 1185 1394 93 5 0 chr13 78677612 78677816 -41606496 + L1_Mm LINE L1 3345 3549 -2334 2 1185 6438 93 16 4 chr13 78677813 78678763 -41605549 + L1_Mus1 LINE L1 5607 6567 0 2 1185 6219 102 12 0 chr13 78678767 78679706 -41604606 + L1_Mus3 LINE L1 5682 6631 -7 2 1185 254 211 26 0 chr13 78681266 78681342 -41602970 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 2 1185 328 242 124 6 chr13 78681803 78681902 -41602410 + PB1D10 SINE Alu 11 116 -1 2 1185 348 242 72 27 chr13 78682305 78682466 -41601846 - Lx7 LINE L1 -35 7661 7537 2 1185 5994 170 16 14 chr13 78682465 78683638 -41600674 - L1_Mm LINE L1 -184 5699 4524 2 1185 959 227 37 5 chr13 78683637 78683854 -41600458 - L1VL2 LINE L1 -6018 317 94 2 1185 1276 228 33 26 chr13 78683907 78684213 -41600099 - Lx5 LINE L1 -3 7047 6740 2 1185 1564 172 21 18 chr13 78684245 78684571 -41599741 - L1_Mur3 LINE L1 -3027 2853 2527 2 1185 1631 275 64 73 chr13 78684560 78685203 -41599109 - L1_Mur3 LINE L1 -6955 773 137 2 1185 3720 211 72 91 chr13 78685736 78686852 -41597460 + RLTR25A LTR ERVK 8 1101 -2 2 1185 206 62 31 0 chr13 78687055 78687087 -41597225 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2 1185 450 261 61 35 chr13 78687197 78687427 -41596885 + L1MA4 LINE L1 5693 5928 -372 2 1185 357 269 134 49 chr13 78687459 78687623 -41596689 + B3A SINE B2 1 178 -20 2 1185 204 331 0 24 chr13 78687665 78687832 -41596480 + (CTCA)n Simple_repeat Simple_repeat 4 166 0 2 1185 493 331 26 13 chr13 78687890 78687989 -41596323 + B3A SINE B2 36 138 -60 2 1185 3464 47 33 0 chr13 78687989 78688411 -41595901 - RLTR10C LTR ERVK 0 436 1 2 1185 493 331 26 13 chr13 78688411 78688467 -41595845 + B3A SINE B2 139 193 -5 2 1185 272 27 27 0 chr13 78690032 78690069 -41594243 + (CAA)n Simple_repeat Simple_repeat 2 39 0 2 1185 370 371 71 10 chr13 78690643 78690839 -41593473 - LTR33 LTR ERVL -15 500 293 2 1185 25293 119 17 25 chr13 78691021 78694501 -41589811 - L1_Mus3 LINE L1 -1 6637 3183 2 1185 189 0 0 0 chr13 78694501 78694522 -41589790 + (CAA)n Simple_repeat Simple_repeat 1 21 0 2 1185 25293 164 23 53 chr13 78694522 78697394 -41586918 - L1_Mus3 LINE L1 -2701 3182 416 2 1185 360 264 47 0 chr13 78697404 78697510 -41586802 + L1MB2 LINE L1 6016 6126 -45 2 1185 295 279 115 0 chr13 78697518 78697622 -41586690 + MLT1B LTR MaLR 4 119 -271 2 1185 1230 169 44 47 chr13 78697691 78697989 -41586323 + RMER1A Other Other 730 1026 -4 2 1185 449 373 49 33 chr13 78698003 78698247 -41586065 + MLT1B LTR MaLR 135 382 -8 2 1185 3518 180 86 19 chr13 78698774 78699559 -41584753 + Lx2B LINE L1 698 1555 -4331 2 1185 1053 88 0 0 chr13 78699559 78699695 -41584617 + B1_Mus1 SINE Alu 1 136 -12 2 1185 498 17 0 0 chr13 78699696 78699755 -41584557 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1185 3518 157 0 20 chr13 78699755 78700078 -41584234 + Lx2B LINE L1 1556 1871 -4015 2 1185 7124 64 10 2 chr13 78700100 78700797 -41583515 - L1_Mus2 LINE L1 0 6566 5862 2 1185 291 28 0 0 chr13 78700797 78700833 -41583479 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1185 7124 80 11 1 chr13 78700833 78701557 -41582755 - L1_Mus2 LINE L1 -705 5861 5129 2 1185 1139 179 0 0 chr13 78701557 78701792 -41582520 + Lx2B LINE L1 1860 2094 -3792 2 1185 19831 145 19 34 chr13 78702533 78703276 -41581036 + Lx2B LINE L1 2097 2818 -3068 2 1185 261 0 0 0 chr13 78703276 78703305 -41581007 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 2 1185 19831 145 19 34 chr13 78703305 78704353 -41579959 + Lx2B LINE L1 2819 3840 -2046 2 1185 260 0 0 54 chr13 78704353 78704390 -41579922 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1185 19831 146 17 25 chr13 78704390 78707552 -41576760 + Lx2B LINE L1 3841 6999 -1 2 1185 234 0 0 0 chr13 78707700 78707726 -41576586 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1185 243 0 0 0 chr13 78707726 78707753 -41576559 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1185 322 316 42 26 chr13 78707754 78707871 -41576441 - MLT2B4 LTR ERVL -385 169 51 2 1185 510 306 43 0 chr13 78708012 78708221 -41576091 - Lx6 LINE L1 -28 7432 7215 2 1185 275 272 0 120 chr13 78708183 78708325 -41575987 + Lx6 LINE L1 7027 7151 -309 2 1185 258 214 64 53 chr13 78708428 78708522 -41575790 - L1M5 LINE L1 -556 5888 5794 2 1185 361 240 161 22 chr13 78708621 78708928 -41575384 - L1M5 LINE L1 -2338 5657 5304 2 1185 4539 49 13 0 chr13 78709015 78709564 -41574748 - L1Md_F2 LINE L1 -1 6581 6026 2 1185 25 0 0 0 chr13 78709570 78709595 -41574717 + AT_rich Low_complexity Low_complexity 1 25 0 2 1185 240 172 0 0 chr13 78711688 78711746 -41572566 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 2 1185 1295 184 97 8 chr13 78713356 78713684 -41570628 - BGLII_Mus LTR ERVK -62 359 4 2 1185 351 0 0 0 chr13 78713807 78713846 -41570466 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1185 725 302 94 53 chr13 78713858 78714124 -41570188 - B4 SINE B4 0 292 16 2 1185 21 0 0 0 chr13 78714129 78714150 -41570162 + AT_rich Low_complexity Low_complexity 1 21 0 2 1185 1058 294 42 16 chr13 78714754 78715252 -41569060 - L1ME3B LINE L1 -414 5826 5320 2 1185 194 0 39 0 chr13 78715643 78715669 -41568643 + (CCAA)n Simple_repeat Simple_repeat 1 27 0 2 1185 204 266 122 37 chr13 78717831 78717913 -41566399 - MIR SINE MIR -108 168 80 2 1185 204 44 89 0 chr13 78718399 78718444 -41565868 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 1185 1061 65 65 0 chr13 78718446 78718585 -41565727 - B1_Mus1 SINE Alu 0 148 1 2 1185 264 317 32 8 chr13 78718920 78719044 -41565268 - L1M5 LINE L1 -296 5828 5702 2 1185 818 189 6 0 chr13 78719942 78720117 -41564195 + CT-rich Low_complexity Low_complexity 3 178 0 2 1185 216 0 0 0 chr13 78723284 78723308 -41561004 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1185 1117 72 0 0 chr13 78723308 78723447 -41560865 - B1_Mus1 SINE Alu -9 139 1 2 1185 21 0 0 0 chr13 78723546 78723567 -41560745 + AT_rich Low_complexity Low_complexity 1 21 0 2 1185 279 133 0 0 chr13 78725891 78725936 -41558376 + (CAT)n Simple_repeat Simple_repeat 1 45 0 2 1185 502 302 29 29 chr13 78726126 78726311 -41558001 - Lx8 LINE L1 -482 7162 6849 2 1185 706 111 197 0 chr13 78726776 78726893 -41557419 - B1_Mus2 SINE Alu -7 140 1 2 1185 973 301 73 6 chr13 78727413 78727573 -41556739 + MLT1B LTR MaLR 7 183 -207 2 1185 360 0 0 0 chr13 78727573 78727613 -41556699 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1185 973 301 73 6 chr13 78727613 78727806 -41556506 + MLT1B LTR MaLR 184 384 -6 2 1185 220 242 0 52 chr13 78728255 78728351 -41555961 + (TA)n Simple_repeat Simple_repeat 2 92 0 2 1185 840 301 19 37 chr13 78728383 78728652 -41555660 - B4A SINE B4 -2 290 27 2 1185 315 217 79 87 chr13 78728694 78728820 -41555492 - HAL1-3A_ME LINE L1 -758 2100 1976 2 1185 249 280 174 36 chr13 78728833 78729029 -41555283 - L1MEg LINE L1 -4696 2341 2119 2 1185 489 151 0 0 chr13 78729045 78729131 -41555181 + CT-rich Low_complexity Low_complexity 3 88 0 2 1185 323 259 155 42 chr13 78729159 78729352 -41554960 - L1MEg LINE L1 -4872 2165 1951 2 1185 255 281 83 0 chr13 78729558 78729679 -41554633 - L1MEg LINE L1 -4931 1492 1362 2 1185 210 178 26 52 chr13 78731158 78731235 -41553077 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 2 1185 3929 108 8 52 chr13 78731300 78731936 -41552376 - L1Md_F2 LINE L1 -2 6580 5973 2 1185 26636 86 14 0 chr13 78731938 78736373 -41547939 - L1Md_F LINE L1 -1033 4850 355 2 1185 388 355 77 81 chr13 78736404 78736902 -41547410 + MLT1H1 LTR MaLR 29 502 -53 2 1185 21 0 0 0 chr13 78736925 78736946 -41547366 + AT_rich Low_complexity Low_complexity 1 21 0 2 1185 3550 67 17 0 chr13 78737267 78737728 -41546584 + L1_Mus1 LINE L1 6099 6567 0 2 1185 246 81 0 0 chr13 78738501 78738538 -41545774 + (TCTCTG)n Simple_repeat Simple_repeat 6 42 0 2 1185 252 0 0 0 chr13 78739236 78739264 -41545048 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2 1185 24 0 0 0 chr13 78740099 78740123 -41544189 + AT_rich Low_complexity Low_complexity 1 24 0 2 1185 198 143 0 0 chr13 78742033 78742068 -41542244 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1185 24 0 0 0 chr13 78743071 78743095 -41541217 + AT_rich Low_complexity Low_complexity 1 24 0 2 1185 1115 55 0 7 chr13 78743192 78743340 -41540972 + (TCTCC)n Simple_repeat Simple_repeat 2 148 0 2 1185 1003 105 9 9 chr13 78743340 78743552 -41540760 + (TTTC)n Simple_repeat Simple_repeat 1 212 0 2 1185 30 0 0 0 chr13 78743629 78743659 -41540653 + AT_rich Low_complexity Low_complexity 1 30 0 2 1185 8138 43 0 1 chr13 78746522 78747843 -41536469 - L1Md_F2 LINE L1 -12 6570 5252 2 1185 194 245 41 0 chr13 78749530 78749579 -41534733 - L2 LINE L2 -666 2753 2703 2 1185 225 65 0 0 chr13 78749623 78749654 -41534658 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 1185 2150 130 90 19 chr13 78749666 78750034 -41534278 + ORR1B1 LTR MaLR 1 394 0 2 1185 27 0 0 0 chr13 78750044 78750071 -41534241 + AT_rich Low_complexity Low_complexity 1 27 0 2 1185 5653 77 4 32 chr13 78750914 78751702 -41532610 - L1_Mus2 LINE L1 0 6566 5801 2 1185 11791 122 29 21 chr13 78751703 78753910 -41530402 - MusHAL1 LINE L1 -1983 3900 1685 2 1185 225 0 0 0 chr13 78753910 78753935 -41530377 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2 1185 11791 115 30 22 chr13 78753935 78754072 -41530240 - MusHAL1 LINE L1 -2226 1688 1552 2 1185 4674 109 26 51 chr13 78754042 78754282 -41530030 - MusHAL1 LINE L1 -2572 1343 1108 2 1185 2885 115 9 16 chr13 78754282 78754732 -41529580 - L1_Mus3 LINE L1 -3 6635 6189 3 1185 4674 109 26 51 chr13 78754732 78755290 -41529022 - MusHAL1 LINE L1 -2808 1107 565 2 1185 255 139 23 0 chr13 78755289 78755332 -41528980 - L1VL4 LINE L1 -5858 444 401 3 1185 450 0 0 0 chr13 78755342 78755392 -41528920 + (TTTTC)n Simple_repeat Simple_repeat 2 51 0 3 1185 550 90 110 0 chr13 78755395 78755495 -41528817 - Lx LINE L1 -4 6650 6540 3 1185 211 300 128 20 chr13 78756363 78756465 -41527847 - MER5A DNA MER1_type -75 114 2 3 1185 1070 145 0 22 chr13 78756600 78756622 -41527690 - B2_Mm2 SINE B2 -15 180 160 3 1185 342 0 0 0 chr13 78756622 78756660 -41527652 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 3 1185 1070 145 0 22 chr13 78756660 78756820 -41527492 - B2_Mm2 SINE B2 -36 159 2 3 1185 306 0 0 0 chr13 78757010 78757044 -41527268 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 3 1185 181 351 45 38 chr13 78758038 78758195 -41526117 - MIRm SINE MIR 0 276 119 3 1185 526 350 53 78 chr13 78759475 78759872 -41524440 - MLT1B LTR MaLR 0 390 4 3 1185 245 135 0 19 chr13 78761472 78761525 -41522787 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1185 251 262 66 28 chr13 78762034 78762140 -41522172 - LTR33A LTR ERVL -2 518 409 3 1185 26 0 0 0 chr13 78764226 78764252 -41520060 + AT_rich Low_complexity Low_complexity 1 26 0 3 1185 333 375 58 21 chr13 78766639 78766879 -41517433 - MIR SINE MIR -12 250 2 3 1185 418 202 39 29 chr13 78767282 78767384 -41516928 - PB1D10 SINE Alu -1 116 14 3 1185 23 0 0 0 chr13 78770561 78770584 -41513728 + AT_rich Low_complexity Low_complexity 1 23 0 3 1185 439 318 39 13 chr13 78770689 78770845 -41513467 + RSINE1 SINE B4 4 163 -2 3 1185 723 88 0 0 chr13 78770854 78770967 -41513345 + (CA)n Simple_repeat Simple_repeat 2 114 0 3 1185 520 78 0 0 chr13 78772546 78772623 -41511689 + L1_Mus2 LINE L1 6490 6566 0 3 1185 188 389 43 26 chr13 78772903 78773019 -41511293 - MIRb SINE MIR -134 134 17 3 1185 2947 215 58 3 chr13 78773661 78774267 -41510045 + Lx9 LINE L1 6584 7222 -422 3 1186 229 153 14 14 chr13 78774279 78774352 -41509960 + A-rich Low_complexity Low_complexity 1 73 0 3 1186 237 65 0 0 chr13 78774424 78774455 -41509857 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1186 436 310 113 13 chr13 78774462 78774742 -41509570 + MER47B DNA MER2_type 36 411 -7 3 1186 241 242 117 32 chr13 78774751 78774845 -41509467 - L1MDa LINE L1 -3439 3098 2997 3 1186 474 247 217 24 chr13 78774911 78775289 -41509023 - L1MDa LINE L1 -3545 2992 2542 3 1186 274 200 120 0 chr13 78775353 78775428 -41508884 - L1MDa LINE L1 -4080 2553 2470 3 1186 231 241 0 0 chr13 78775433 78775487 -41508825 - L1MDa LINE L1 -4464 2169 2116 3 1186 45 75 0 0 chr13 78776374 78776468 -41507844 + AT_rich Low_complexity Low_complexity 1 94 0 3 1186 354 45 0 0 chr13 78777085 78777129 -41507183 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1186 213 301 27 14 chr13 78777769 78777843 -41506469 + MIR3 SINE MIR 131 205 -3 3 1186 388 361 122 29 chr13 78778149 78778500 -41505812 - MER121 Unknown Unknown -22 390 7 3 1186 203 175 0 24 chr13 78778691 78778732 -41505580 + CT-rich Low_complexity Low_complexity 4 43 0 3 1186 27 0 0 0 chr13 78778781 78778808 -41505504 + AT_rich Low_complexity Low_complexity 1 27 0 3 1186 1366 99 14 0 chr13 78778953 78779164 -41505148 + Lx2 LINE L1 6782 6995 -2 3 1186 182 280 125 62 chr13 78779437 78779597 -41504715 - L3 LINE CR1 -277 4212 4043 3 1186 639 287 0 6 chr13 78779748 78779920 -41504392 - B3A SINE B2 -20 178 8 3 1186 350 375 14 86 chr13 78780366 78780576 -41503736 + LTR33A LTR ERVL 27 221 -299 3 1186 207 0 0 0 chr13 78780799 78780822 -41503490 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1186 243 284 27 13 chr13 78780989 78781064 -41503248 - MER46C DNA MER2_type -7 331 256 3 1186 260 269 0 0 chr13 78781064 78781116 -41503196 + ID4 SINE ID 2 53 -30 3 1186 189 262 0 0 chr13 78781394 78781436 -41502876 + MIR SINE MIR 200 241 -21 3 1186 705 131 0 0 chr13 78783005 78783135 -41501177 + (TG)n Simple_repeat Simple_repeat 2 131 0 3 1186 558 242 130 6 chr13 78783136 78783298 -41501014 - B3A SINE B2 -16 182 1 3 1186 458 332 66 35 chr13 78784393 78784621 -41499691 + MIRb SINE MIR 26 260 -8 3 1186 410 229 67 17 chr13 78784691 78784811 -41499501 + MIR SINE MIR 111 236 -26 3 1186 1382 259 66 5 chr13 78784868 78785263 -41499049 - MTD LTR MaLR 0 419 1 3 1186 334 238 28 47 chr13 78785268 78785374 -41498938 - MTD-int LTR MaLR -5 1253 1150 3 1186 199 29 27 54 chr13 78785375 78785412 -41498900 + (TATAA)n Simple_repeat Simple_repeat 5 40 0 3 1186 36 23 0 0 chr13 78785459 78785502 -41498810 + AT_rich Low_complexity Low_complexity 1 43 0 3 1186 4127 246 33 60 chr13 78785502 78786706 -41497606 - MTD-int LTR MaLR -86 1172 1 3 1186 1516 279 19 41 chr13 78786706 78787121 -41497191 - MTD LTR MaLR -8 411 6 3 1186 834 255 5 43 chr13 78787148 78787357 -41496955 - B3 SINE B2 -14 202 2 3 1186 207 0 0 0 chr13 78787372 78787395 -41496917 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1186 203 305 0 0 chr13 78787995 78788054 -41496258 + (TG)n Simple_repeat Simple_repeat 1 59 0 3 1186 400 298 41 31 chr13 78788091 78788320 -41495992 - B4A SINE B4 -8 284 1 3 1186 1260 295 53 57 chr13 78788467 78789046 -41495266 + Lx8 LINE L1 6764 7340 -133 3 1186 3386 113 47 10 chr13 78789148 78789659 -41494653 + Lx2 LINE L1 6299 6828 -169 3 1186 2433 58 6 15 chr13 78789666 78789997 -41494315 + MTA_Mm LTR MaLR 1 328 -68 3 1186 456 104 0 0 chr13 78790520 78790587 -41493725 + (CATAT)n Simple_repeat Simple_repeat 2 68 0 3 1186 219 385 53 7 chr13 78790605 78790771 -41493541 + MIRm SINE MIR 26 195 -13 3 1186 1860 142 108 6 chr13 78792679 78793012 -41491300 - ORR1B2 LTR MaLR 0 367 1 3 1186 275 273 87 40 chr13 78793886 78794012 -41490300 + MLT1A1 LTR MaLR 4 135 -273 3 1186 226 288 13 27 chr13 78794168 78794243 -41490069 + MTEa LTR MaLR 294 367 -12 3 1186 700 334 61 32 chr13 78795043 78795355 -41488957 - MLT1H LTR MaLR -207 342 22 3 1186 597 234 196 23 chr13 78795662 78795876 -41488436 - MIR SINE MIR 0 262 12 3 1186 522 57 0 0 chr13 78797456 78797526 -41486786 + (TG)n Simple_repeat Simple_repeat 1 70 0 3 1186 637 281 28 38 chr13 78798596 78798807 -41485505 + B3 SINE B2 1 209 -7 3 1186 21 57 0 0 chr13 78798809 78798844 -41485468 + AT_rich Low_complexity Low_complexity 1 35 0 3 1186 944 307 9 30 chr13 78799248 78799587 -41484725 + Lx9 LINE L1 7076 7407 -237 3 1186 421 62 0 30 chr13 78799599 78799666 -41484646 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1186 22 56 0 0 chr13 78799920 78799956 -41484356 + AT_rich Low_complexity Low_complexity 1 36 0 3 1186 581 262 107 14 chr13 78800140 78800420 -41483892 - L1MC LINE L1 -560 5799 5489 3 1186 690 286 25 53 chr13 78800470 78800754 -41483558 - B4 SINE B4 -14 278 3 3 1186 619 266 101 64 chr13 78800791 78801366 -41482946 - L1MC LINE L1 -806 5485 4902 3 1186 24 53 0 0 chr13 78801813 78801851 -41482461 + AT_rich Low_complexity Low_complexity 1 38 0 3 1186 571 383 24 0 chr13 78802107 78802355 -41481957 + Tigger5 DNA MER2_type 2134 2387 -19 3 1186 661 325 54 29 chr13 78803388 78803629 -41480683 + B4 SINE B4 42 288 -4 3 1186 324 48 0 0 chr13 78803660 78803702 -41480610 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1186 21 0 0 0 chr13 78803781 78803802 -41480510 + AT_rich Low_complexity Low_complexity 1 21 0 3 1186 347 341 98 23 chr13 78804910 78805084 -41479228 - MIRb SINE MIR -64 204 18 3 1186 656 45 11 0 chr13 78805891 78805979 -41478333 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 1186 262 263 53 0 chr13 78806696 78806772 -41477540 - ID SINE ID -140 84 5 3 1186 202 358 0 31 chr13 78806848 78806946 -41477366 + (TG)n Simple_repeat Simple_repeat 1 95 0 3 1186 578 341 0 6 chr13 78806947 78807112 -41477200 - RSINE1 SINE B4 0 165 2 3 1186 4608 181 34 1 chr13 78807161 78808039 -41476273 + L1_Mur2 LINE L1 4971 5877 0 3 1186 5631 175 5 8 chr13 78808051 78809077 -41475235 + Lx2 LINE L1 5969 6991 -6 3 1186 298 325 26 9 chr13 78809319 78809434 -41474878 - MER5A1 DNA MER1_type 0 166 50 3 1186 25160 112 70 18 chr13 78809474 78815215 -41469097 + L1_Mus3 LINE L1 582 6635 -3 3 1186 6635 37 1 4 chr13 78815377 78816188 -41468124 + L1Md_F3 LINE L1 5762 6570 -14 3 1186 785 293 5 0 chr13 78816249 78816454 -41467858 + B3 SINE B2 1 206 -10 3 1186 234 0 0 0 chr13 78819494 78819520 -41464792 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1186 448 366 13 7 chr13 78819870 78820024 -41464288 + RSINE1 SINE B4 2 156 -9 3 1186 354 123 0 0 chr13 78820030 78820087 -41464225 + (CATA)n Simple_repeat Simple_repeat 1 57 0 3 1186 30 0 0 0 chr13 78820227 78820257 -41464055 + AT_rich Low_complexity Low_complexity 1 30 0 3 1186 1146 70 0 0 chr13 78822197 78822340 -41461972 + B1_Mus1 SINE Alu 1 143 -5 3 1186 396 0 0 0 chr13 78822342 78822386 -41461926 + (TA)n Simple_repeat Simple_repeat 1 44 0 3 1186 237 119 0 0 chr13 78823129 78823171 -41461141 + (CAA)n Simple_repeat Simple_repeat 2 43 0 3 1186 3344 302 112 11 chr13 78823177 78824352 -41459960 - MTE-int LTR MaLR -228 1352 59 3 1186 902 261 42 58 chr13 78824438 78824768 -41459544 - ORR1E LTR MaLR -17 342 18 3 1186 25 31 0 0 chr13 78825482 78825514 -41458798 + AT_rich Low_complexity Low_complexity 1 32 0 3 1186 4105 282 31 24 chr13 78825696 78827051 -41457261 - Lx7 LINE L1 -16 7680 6173 3 1186 443 288 74 29 chr13 78827052 78827070 -41457242 - Charlie1a DNA MER1_type -256 1199 1184 3 1186 1924 50 0 0 chr13 78827070 78827308 -41457004 - L1Md_T LINE L1 0 6582 6345 3 1186 443 288 74 29 chr13 78827308 78827464 -41456848 - Charlie1a DNA MER1_type -272 1183 1017 3 1186 447 311 149 28 chr13 78827658 78827882 -41456430 - Charlie1a DNA MER1_type -559 896 644 3 1186 255 61 0 0 chr13 78827882 78827915 -41456397 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1186 447 311 149 28 chr13 78827915 78827938 -41456374 - Charlie1a DNA MER1_type -812 643 619 3 1186 303 140 0 0 chr13 78829554 78829604 -41454708 + (CA)n Simple_repeat Simple_repeat 1 50 0 3 1186 405 58 0 0 chr13 78829672 78829724 -41454588 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 3 1186 2295 228 25 61 chr13 78830491 78830535 -41453777 + L1VL4 LINE L1 513 551 -5986 4 1186 6051 60 32 22 chr13 78830535 78831349 -41452963 - RLTR13B2 LTR ERVK 0 822 1 4 1186 2670 156 20 13 chr13 78831349 78832073 -41452239 + L1VL4 LINE L1 552 1260 -2557 4 1186 7172 50 2 8 chr13 78832073 78832986 -41451326 + L1Md_F2 LINE L1 5674 6581 -1 4 1186 411 261 82 6 chr13 78834274 78834432 -41449880 + L1MA4 LINE L1 5819 5988 -312 4 1186 234 0 0 0 chr13 78834448 78834474 -41449838 + (GGA)n Simple_repeat Simple_repeat 2 27 0 4 1186 387 0 0 0 chr13 78835183 78835226 -41449086 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1186 2878 35 0 14 chr13 78835226 78835597 -41448715 - L1Md_F3 LINE L1 -22 6562 6197 4 1186 22 0 0 0 chr13 78836068 78836090 -41448222 + AT_rich Low_complexity Low_complexity 1 22 0 4 1186 197 33 33 0 chr13 78837818 78837848 -41446464 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1186 501 17 0 0 chr13 78838179 78838237 -41446075 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 1186 324 304 0 0 chr13 78838437 78838516 -41445796 + ID4 SINE ID 1 79 -4 4 1186 442 132 0 35 chr13 78838781 78838867 -41445445 - L1MD LINE L1 -2218 5777 5695 4 1186 3620 107 0 8 chr13 78838871 78839388 -41444924 + L1Md_F2 LINE L1 6068 6580 -2 4 1186 1993 186 39 17 chr13 78839550 78839960 -41444352 - MTC LTR MaLR -2 419 1 4 1186 329 320 49 77 chr13 78840077 78840324 -41443988 + Lx8 LINE L1 6925 7164 -309 4 1186 261 139 0 0 chr13 78840607 78840650 -41443662 + (CAT)n Simple_repeat Simple_repeat 1 43 0 4 1186 378 0 0 0 chr13 78842528 78842570 -41441742 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1186 296 83 0 20 chr13 78842570 78842619 -41441693 + (GGGA)n Simple_repeat Simple_repeat 4 51 0 4 1186 321 331 138 13 chr13 78842619 78842778 -41441534 + HAL1-3A_ME LINE L1 2284 2462 -396 4 1186 359 360 154 11 chr13 78843759 78844026 -41440286 - L4 LINE RTE -179 1850 1546 4 1186 239 300 47 55 chr13 78844557 78844684 -41439628 + L2c LINE L2 3262 3387 0 4 1186 1096 97 0 0 chr13 78844753 78844897 -41439415 - B1_Mus1 SINE Alu 0 148 5 4 1186 1691 79 0 9 chr13 78844927 78845158 -41439154 - L1_Mus1 LINE L1 -2 6565 6337 4 1186 4581 76 12 0 chr13 78845158 78845806 -41438506 + L1Md_F3 LINE L1 4931 5586 -297 4 1186 8180 42 3 0 chr13 78845807 78846798 -41437514 + L1Md_F3 LINE L1 5588 6581 -3 4 1186 4614 113 8 0 chr13 78846843 78847560 -41436752 + L1_Mm LINE L1 5099 5821 -62 4 1186 2805 241 116 43 chr13 78847880 78848244 -41436068 - Lx6 LINE L1 -5 7455 7106 4 1186 369 0 0 0 chr13 78848244 78848285 -41436027 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1186 2805 241 116 43 chr13 78848285 78848760 -41435552 - Lx6 LINE L1 -355 7105 6555 4 1186 459 0 0 0 chr13 78850046 78850097 -41434215 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 4 1186 378 151 0 0 chr13 78850100 78850173 -41434139 + CT-rich Low_complexity Low_complexity 2 74 0 4 1186 464 284 0 26 chr13 78850327 78850479 -41433833 - Lx9 LINE L1 -946 6698 6551 4 1186 1742 240 106 20 chr13 78850503 78851098 -41433214 + Lx9 LINE L1 6999 7644 0 4 1186 414 0 0 0 chr13 78851109 78851155 -41433157 + (GA)n Simple_repeat Simple_repeat 2 47 0 4 1186 341 188 12 36 chr13 78851319 78851402 -41432910 - RMER1B Other Other -6 1060 980 4 1186 2191 279 38 29 chr13 78851404 78852065 -41432247 - RMER1A Other Other -269 761 95 4 1186 442 337 17 75 chr13 78853040 78853213 -41431099 + RSINE1 SINE B4 3 165 0 4 1186 21 36 0 0 chr13 78854227 78854255 -41430057 + AT_rich Low_complexity Low_complexity 1 28 0 4 1186 695 54 0 11 chr13 78854618 78854712 -41429600 - L1_Mus3 LINE L1 -417 6221 6129 4 1186 2814 110 7 5 chr13 78854712 78855133 -41429179 + L1_Mus3 LINE L1 6214 6635 -3 4 1186 254 167 0 0 chr13 78855899 78855941 -41428371 - B1F SINE Alu -96 53 12 4 1186 411 343 65 14 chr13 78856015 78856154 -41428158 - RSINE1 SINE B4 -18 147 2 4 1186 1181 236 109 21 chr13 78856403 78856788 -41427524 - MTD LTR MaLR 0 419 1 4 1186 181 240 60 0 chr13 78857494 78857544 -41426768 - L3b LINE CR1 -92 390 338 4 1186 195 42 0 0 chr13 78858847 78858871 -41425441 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1186 1565 274 39 55 chr13 78858916 78859572 -41424740 + L1_Rod LINE L1 3798 4448 -1399 4 1186 4613 51 0 0 chr13 78859572 78860137 -41424175 + L1Md_F2 LINE L1 6015 6579 -3 4 1186 1565 274 39 55 chr13 78860137 78860321 -41423991 + L1_Rod LINE L1 4449 4625 -1222 4 1186 6095 13 0 0 chr13 78860921 78861629 -41422683 + MERVL-int LTR ERVL 2328 3035 -2450 4 1186 850 50 25 0 chr13 78862967 78863086 -41421226 + (TTTC)n Simple_repeat Simple_repeat 1 122 0 4 1186 26 50 0 0 chr13 78863096 78863136 -41421176 + AT_rich Low_complexity Low_complexity 1 40 0 4 1186 6240 131 23 25 chr13 78863136 78864183 -41420129 - Lx3_Mus LINE L1 -15 6994 5950 4 1186 1131 121 6 0 chr13 78864183 78864365 -41419947 + L1_Mur1 LINE L1 3493 3675 -2211 4 1186 1635 134 124 0 chr13 78864368 78864659 -41419653 - IAPEY3_LTR LTR ERVK -5 327 1 4 1186 12668 95 1 12 chr13 78864659 78866604 -41417708 + L1_Mur1 LINE L1 3670 5593 -293 4 1186 975 135 39 18 chr13 78866606 78866792 -41417520 - RLTR10 LTR ERVK -16 395 222 4 1186 815 39 0 0 chr13 78866792 78866894 -41417418 - RLTR10-int LTR ERVK -869 1118 1017 4 1186 277 230 0 13 chr13 78866882 78866957 -41417355 - RLTR10-int LTR ERVK -6022 520 447 4 1186 300 289 20 20 chr13 78866976 78867128 -41417184 - RLTR10-int LTR ERVK -6017 1564 1413 4 1186 3962 53 16 2 chr13 78867306 78868133 -41416179 - RLTR10-int LTR ERVK -995 992 1 4 1186 2940 52 52 0 chr13 78868133 78868502 -41415810 - RLTR10 LTR ERVK 0 390 3 4 1186 2497 99 24 0 chr13 78868506 78868822 -41415490 + Lx3A LINE L1 5587 5906 -1075 4 1186 180 0 0 0 chr13 78868822 78868842 -41415470 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 4 1186 2497 99 24 0 chr13 78868842 78868897 -41415415 + Lx3A LINE L1 5907 5965 -1016 4 1186 22 56 0 0 chr13 78869922 78869958 -41414354 + AT_rich Low_complexity Low_complexity 1 36 0 4 1186 23398 75 1 22 chr13 78870298 78874395 -41409917 - L1Md_F3 LINE L1 -16 6568 2726 4 1186 3098 56 10 14 chr13 78874395 78874810 -41409502 - L1Md_F3 LINE L1 -1 6583 6171 4 1186 21551 164 4 37 chr13 78874810 78876991 -41407321 - L1Md_F3 LINE L1 -3152 2725 590 4 1186 347 314 186 47 chr13 78877575 78877919 -41406393 - MLT2D LTR ERVL -8 406 15 4 1186 355 132 32 21 chr13 78879472 78879565 -41404747 - Lx2 LINE L1 -7 6990 6897 4 1186 415 167 70 9 chr13 78880417 78880532 -41403780 + Lx9 LINE L1 7518 7639 -5 4 1186 215 263 0 0 chr13 78883663 78883701 -41400611 + ID SINE ID 37 74 -150 4 1186 752 281 66 25 chr13 78884157 78884398 -41399914 + MTD LTR MaLR 35 285 -134 4 1186 2430 119 6 0 chr13 78884398 78884758 -41399554 - Lx3_Mus LINE L1 -173 6836 6475 4 1186 15993 99 29 13 chr13 78884742 78887751 -41396561 - Lx3_Mus LINE L1 -704 6305 3244 4 1186 2171 91 19 3 chr13 78888144 78888463 -41395849 - L1_Mus2 LINE L1 -555 6012 5689 4 1186 3938 99 24 45 chr13 78888463 78888847 -41395465 + L1_Mus2 LINE L1 5965 6363 -203 4 1186 4522 125 30 29 chr13 78888847 78889655 -41394657 + RMER17D2 LTR ERVK 1 809 0 4 1186 3938 99 24 45 chr13 78889655 78889885 -41394427 + L1_Mus2 LINE L1 6364 6566 0 4 1186 7801 47 4 4 chr13 78889961 78891243 -41393069 - L1Md_F2 LINE L1 -3 6579 5300 4 1186 11500 27 0 0 chr13 78891356 78892713 -41391599 + L1Md_T LINE L1 4230 5586 -297 4 1186 8357 36 1 0 chr13 78892713 78893708 -41390604 + L1Md_T LINE L1 5587 6582 0 4 1186 432 0 0 0 chr13 78894677 78894725 -41389587 + (TTTA)n Simple_repeat Simple_repeat 3 50 0 4 1186 8780 71 6 39 chr13 78894744 78896726 -41387586 - L1Md_F2 LINE L1 0 6582 4659 4 1186 236 234 0 0 chr13 78897092 78897139 -41387173 + CT-rich Low_complexity Low_complexity 1 47 0 4 1186 8407 140 10 18 chr13 78897139 78898938 -41385374 - Lx3C LINE L1 -8 6968 5190 4 1186 317 316 95 19 chr13 78898949 78899107 -41385205 - MLT1B LTR MaLR -218 172 3 4 1186 319 131 0 0 chr13 78899447 78899508 -41384804 + Lx LINE L1 6021 6081 -928 4 1186 1017 156 0 33 chr13 78899513 78899725 -41384587 + Lx LINE L1 6446 6650 -4 4 1186 535 244 76 38 chr13 78899725 78899916 -41384396 + MTA_Mm LTR MaLR 182 419 -2 4 1186 270 0 0 0 chr13 78900276 78900306 -41384006 + (TAA)n Simple_repeat Simple_repeat 1 30 0 4 1186 23 0 0 0 chr13 78900379 78900402 -41383910 + AT_rich Low_complexity Low_complexity 1 23 0 4 1186 232 289 158 49 chr13 78902067 78902231 -41382081 - MER63B DNA AcHobo -2 434 253 4 1187 5448 46 27 13 chr13 78906217 78906924 -41377388 + L1Md_F3 LINE L1 5868 6584 0 4 1187 23 68 0 0 chr13 78909240 78909284 -41375028 + AT_rich Low_complexity Low_complexity 1 44 0 4 1187 187 242 29 57 chr13 78909350 78909420 -41374892 - L2c LINE L2 -4 3383 3316 4 1187 3009 242 62 21 chr13 78910887 78911904 -41372408 + L1_Rod LINE L1 458 1509 -4338 4 1187 1078 244 76 13 chr13 78911901 78912217 -41372095 + Lx9 LINE L1 7016 7351 -293 4 1187 293 362 73 66 chr13 78912593 78912729 -41371583 + RSINE1 SINE B4 8 144 -21 4 1187 3976 211 15 2 chr13 78914188 78914975 -41369337 + Lx9 LINE L1 6395 7191 -453 4 1187 626 205 0 0 chr13 78914990 78915107 -41369205 + Lx9 LINE L1 6620 6736 -908 4 1187 1760 177 68 15 chr13 78915105 78915517 -41368795 + Lx9 LINE L1 7207 7640 -4 4 1187 3013 106 39 2 chr13 78915708 78916145 -41368167 - Lx3_Mus LINE L1 0 7009 6557 4 1187 4051 114 65 25 chr13 78916145 78916819 -41367493 + Lx3A LINE L1 5819 6519 -462 4 1187 360 0 0 0 chr13 78916931 78916971 -41367341 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1187 594 75 0 0 chr13 78917125 78917205 -41367107 + (CCAA)n Simple_repeat Simple_repeat 4 83 0 4 1187 396 0 0 0 chr13 78917376 78917420 -41366892 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1187 482 288 101 0 chr13 78917421 78917560 -41366752 - B3A SINE B2 -44 154 2 4 1187 5555 64 0 1 chr13 78917776 78918542 -41365770 - L1_Mus1 LINE L1 0 6567 5865 4 1187 2125 39 0 0 chr13 78918542 78918796 -41365516 + L1_Mus1 LINE L1 5611 5864 -703 4 1187 243 302 24 32 chr13 78919002 78919125 -41365187 - Lx7 LINE L1 -16 7680 7559 4 1187 498 17 0 0 chr13 78919191 78919250 -41365062 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1187 661 235 23 0 chr13 78919265 78919397 -41364915 + Lx7 LINE L1 6882 7016 -680 4 1187 3007 298 83 34 chr13 78919396 78919432 -41364880 - Lx7 LINE L1 -595 6865 6832 4 1187 688 70 0 0 chr13 78919432 78919532 -41364780 + L1_Mus1 LINE L1 6468 6567 0 4 1187 4502 221 111 12 chr13 78919532 78921365 -41362947 - Lx7 LINE L1 -629 6831 4805 4 1187 1179 22 0 0 chr13 78922357 78922495 -41361817 + (GA)n Simple_repeat Simple_repeat 1 138 0 4 1187 186 43 0 0 chr13 78925614 78925637 -41358675 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1187 253 151 25 99 chr13 78926222 78926303 -41358009 - L1_Mus4 LINE L1 -6 6630 6556 5 1187 4946 132 5 29 chr13 78926273 78927147 -41357165 - L1_Mm LINE L1 -1396 4487 3635 5 1187 2754 99 26 0 chr13 78927144 78927570 -41356742 - L1VL1 LINE L1 -1900 1798 1362 5 1187 9413 68 4 10 chr13 78927575 78929528 -41354784 - L1Md_F2 LINE L1 0 6582 4646 5 1187 979 157 0 29 chr13 78929529 78929700 -41354612 + L1VL1 LINE L1 77 242 -6180 5 1187 4592 120 104 18 chr13 78929692 78930772 -41353540 - L1VL1 LINE L1 -2315 1383 191 5 1187 333 0 0 0 chr13 78930957 78930994 -41353318 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1187 1236 309 47 44 chr13 78930998 78931614 -41352698 - Lx9 LINE L1 -180 7464 6847 5 1187 449 261 115 15 chr13 78932594 78932729 -41351583 + RSINE1 SINE B4 2 153 -12 5 1187 206 231 0 15 chr13 78932746 78932764 -41351548 + (TA)n Simple_repeat Simple_repeat 2 19 0 5 1187 1511 144 96 4 chr13 78932764 78933036 -41351276 + L1_Mus4 LINE L1 6330 6626 -10 5 1187 206 231 0 15 chr13 78933036 78933083 -41351229 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1187 248 298 118 55 chr13 78933266 78933376 -41350936 - RMER15 LTR ERVL -156 419 303 5 1187 332 274 217 51 chr13 78933525 78933760 -41350552 - MLT1D LTR MaLR -157 348 75 5 1187 30 27 0 0 chr13 78933767 78933804 -41350508 + AT_rich Low_complexity Low_complexity 1 37 0 5 1187 23 0 0 0 chr13 78934682 78934705 -41349607 + AT_rich Low_complexity Low_complexity 1 23 0 5 1187 220 370 50 54 chr13 78935495 78935775 -41348537 - L2a LINE L2 -1 3425 3147 5 1187 247 208 18 36 chr13 78936082 78936137 -41348175 + MIR3 SINE MIR 108 161 -47 5 1187 491 196 43 0 chr13 78937777 78937869 -41346443 - Lx6 LINE L1 -1247 6213 6118 5 1187 386 307 89 0 chr13 78937858 78938060 -41346252 - L1_Mur3 LINE L1 -7424 288 69 5 1187 1217 257 24 31 chr13 78938052 78938345 -41345967 + Lx5 LINE L1 6759 7049 -1 5 1187 27 49 0 0 chr13 78938346 78938387 -41345925 + AT_rich Low_complexity Low_complexity 1 41 0 5 1187 187 216 0 56 chr13 78938527 78938581 -41345731 - L2a LINE L2 -545 2874 2824 5 1187 25 51 0 0 chr13 78939777 78939816 -41344496 + AT_rich Low_complexity Low_complexity 1 39 0 5 1187 990 97 0 0 chr13 78940689 78940823 -41343489 + B1_Mm SINE Alu 2 135 -12 5 1187 216 0 0 0 chr13 78940824 78940848 -41343464 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1187 229 300 14 14 chr13 78941226 78941297 -41343015 - L3 LINE CR1 -763 3726 3656 5 1187 396 55 0 0 chr13 78941301 78941356 -41342956 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1187 457 343 16 25 chr13 78942707 78942949 -41341363 + L3 LINE CR1 3443 3682 -807 5 1187 254 321 8 92 chr13 78944075 78944195 -41340117 - MER5B DNA MER1_type -15 163 54 5 1187 203 0 0 36 chr13 78944482 78944510 -41339802 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1187 399 21 0 0 chr13 78944732 78944780 -41339532 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1187 24 32 0 0 chr13 78945939 78945970 -41338342 + AT_rich Low_complexity Low_complexity 1 31 0 5 1187 1477 220 26 13 chr13 78946597 78946901 -41337411 - RLTR20B3 LTR ERVK -269 308 1 5 1187 788 79 0 137 chr13 78946901 78947046 -41337266 - ORR1A3 LTR MaLR -201 125 1 5 1187 339 382 51 76 chr13 78947046 78947317 -41336995 - MLT1E1 LTR MaLR -78 576 313 5 1187 22 35 0 0 chr13 78948332 78948361 -41335951 + AT_rich Low_complexity Low_complexity 1 29 0 5 1187 21 36 0 0 chr13 78948772 78948800 -41335512 + AT_rich Low_complexity Low_complexity 1 28 0 5 1187 327 384 22 22 chr13 78951204 78951481 -41332831 - Lx8 LINE L1 0 7473 7197 5 1187 1604 317 19 0 chr13 78951480 78951947 -41332365 - Lx8 LINE L1 -496 6977 6502 5 1187 1150 59 18 12 chr13 78952022 78952193 -41332119 - L1Md_F2 LINE L1 -1 6581 6410 5 1187 229 169 34 0 chr13 78952295 78952354 -41331958 + CT-rich Low_complexity Low_complexity 2 62 0 5 1187 342 0 0 0 chr13 78952375 78952413 -41331899 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1187 507 174 7 32 chr13 78952442 78952596 -41331716 + (TA)n Simple_repeat Simple_repeat 1 150 0 5 1187 383 276 43 36 chr13 78952637 78952776 -41331536 - L1MA4 LINE L1 -383 5917 5778 5 1187 1280 56 11 6 chr13 78953233 78953413 -41330899 - L1Md_F2 LINE L1 -3 6579 6399 5 1187 3383 209 20 22 chr13 78953462 78953499 -41330813 - Lx5 LINE L1 -17 7033 7001 5 1187 2496 52 2 193 chr13 78953499 78953950 -41330362 + RLTR10B2 LTR ERVK 1 365 0 5 1187 3383 209 20 22 chr13 78953950 78954596 -41329716 - Lx5 LINE L1 -50 7000 6351 5 1187 449 68 0 108 chr13 78954596 78954679 -41329633 - B1_Mus2 SINE Alu 0 147 74 5 1187 1287 194 8 0 chr13 78955739 78955987 -41328325 + Lx4A LINE L1 398 647 -6439 5 1187 4633 143 44 9 chr13 78956381 78957171 -41327141 + Lx4A LINE L1 6239 7056 -2 5 1187 3544 89 38 8 chr13 78957195 78957692 -41326620 + L1_Mus1 LINE L1 6056 6567 0 5 1187 23188 150 89 39 chr13 78957697 78960309 -41324003 + Lx4A LINE L1 643 3326 -2551 5 1187 962 92 35 0 chr13 78960309 78960451 -41323861 + B1_Mm SINE Alu 1 147 0 5 1187 23188 142 78 33 chr13 78960451 78963362 -41320950 + Lx4A LINE L1 3327 6497 -561 5 1187 3558 30 32 2 chr13 78963362 78963796 -41320516 - L1Md_F3 LINE L1 -1 6583 6137 5 1187 6138 162 131 17 chr13 78963796 78964216 -41320096 + Lx4A LINE L1 6498 6949 -109 5 1187 219 69 0 0 chr13 78964237 78964266 -41320046 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 5 1187 477 131 0 0 chr13 78964835 78964919 -41319393 + (TA)n Simple_repeat Simple_repeat 1 84 0 5 1187 397 288 0 9 chr13 78965520 78965625 -41318687 - ORR1D1 LTR MaLR -270 104 1 5 1187 996 122 7 0 chr13 78965684 78965831 -41318481 + B1_Mus1 SINE Alu 1 148 0 5 1187 189 132 0 0 chr13 78965836 78965874 -41318438 + (A)n Simple_repeat Simple_repeat 1 38 0 5 1187 2350 92 15 0 chr13 78965879 78966207 -41318105 - L1_Mus4 LINE L1 -477 6159 5827 5 1187 3711 93 8 4 chr13 78966207 78966727 -41317585 + L1_Mus4 LINE L1 6109 6630 -6 5 1187 30 0 0 0 chr13 78967018 78967048 -41317264 + AT_rich Low_complexity Low_complexity 1 30 0 5 1187 35107 67 4 3 chr13 78967768 78973882 -41310430 - L1Md_F2 LINE L1 -1 6584 368 5 1187 22 0 0 0 chr13 78973892 78973914 -41310398 + AT_rich Low_complexity Low_complexity 1 22 0 5 1187 515 66 13 0 chr13 78974011 78974087 -41310225 + (TC)n Simple_repeat Simple_repeat 2 78 0 5 1187 214 194 16 16 chr13 78974094 78974157 -41310155 + (TATATG)n Simple_repeat Simple_repeat 6 68 0 5 1187 415 327 38 13 chr13 78974160 78974318 -41309994 - RSINE1 SINE B4 0 165 4 5 1187 758 282 128 56 chr13 78974398 78975007 -41309305 - Lx9 LINE L1 -9 7635 6983 5 1187 501 298 44 32 chr13 78975156 78975406 -41308906 - Lx8 LINE L1 0 7473 7221 5 1187 536 259 0 0 chr13 78975466 78975578 -41308734 + Lx8 LINE L1 7019 7130 -343 5 1187 228 220 0 78 chr13 78975755 78975819 -41308493 + MT2B2 LTR ERVL 199 257 -327 5 1187 483 91 130 0 chr13 78975764 78975841 -41308471 + B1_Mus2 SINE Alu 48 134 -13 5 1187 534 31 0 0 chr13 78975841 78975905 -41308407 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 1187 2904 149 107 28 chr13 78976675 78977831 -41306481 + Lx3_Mus LINE L1 13 1510 -4376 5 1187 18336 21 2 0 chr13 78977831 78979980 -41304332 + L1Md_T LINE L1 3434 5586 -297 5 1187 7934 59 0 0 chr13 78979980 78980976 -41303336 + L1Md_T LINE L1 5587 6582 0 5 1187 1588 55 0 0 chr13 78980976 78981177 -41303135 + L1Md_T LINE L1 6381 6581 -1 5 1187 13817 101 22 53 chr13 78981178 78982650 -41301662 + Lx3_Mus LINE L1 1497 2895 -2991 5 1187 1189 85 11 0 chr13 78982650 78982826 -41301486 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 5 1187 13817 101 22 53 chr13 78982826 78983717 -41300595 + Lx3_Mus LINE L1 2896 3787 -2099 5 1187 9486 104 3 33 chr13 78983720 78985240 -41299072 + Lx3_Mus LINE L1 5548 7006 -3 5 1187 359 377 48 45 chr13 78985364 78985695 -41298617 + LTR40b LTR ERVL 70 401 -61 5 1187 21 36 0 0 chr13 78986019 78986047 -41298265 + AT_rich Low_complexity Low_complexity 1 28 0 5 1187 35 71 0 0 chr13 78986186 78986256 -41298056 + AT_rich Low_complexity Low_complexity 1 70 0 5 1187 368 250 0 11 chr13 78986664 78986846 -41297466 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1187 606 326 42 42 chr13 78986905 78987032 -41297280 - MLT1B LTR MaLR -3 387 263 5 1187 2632 128 13 60 chr13 78987032 78987482 -41296830 - RLTR23 LTR ERV1 -1 429 1 5 1187 606 326 42 42 chr13 78987482 78987661 -41296651 - MLT1B LTR MaLR -128 262 81 5 1187 286 299 0 17 chr13 78987661 78987780 -41296532 + L1M2 LINE L1 4707 4823 -1320 5 1187 631 12 47 0 chr13 78988076 78988162 -41296150 + (CAAAA)n Simple_repeat Simple_repeat 1 90 0 5 1187 30 59 0 0 chr13 78990036 78990087 -41294225 + AT_rich Low_complexity Low_complexity 1 51 0 5 1187 429 20 0 0 chr13 78990174 78990224 -41294088 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1187 736 275 70 35 chr13 78990231 78990517 -41293795 - Lx8 LINE L1 -209 7264 6969 5 1187 203 229 0 0 chr13 78991877 78991912 -41292400 + polypurine Low_complexity Low_complexity 2 36 0 5 1187 1337 176 18 129 chr13 78992342 78992728 -41291584 - RMER17B LTR ERVK -615 343 1 5 1187 2665 173 44 8 chr13 78992728 78993178 -41291134 + RMER20B LTR ERVK 142 608 -19 5 1187 315 0 0 0 chr13 78994456 78994491 -41289821 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1187 351 377 38 6 chr13 78994680 78994840 -41289472 + B4A SINE B4 10 174 -118 5 1187 1885 208 122 14 chr13 78995956 78996439 -41287873 - Lx7 LINE L1 -390 7306 6772 5 1187 26 30 0 0 chr13 78996487 78996520 -41287792 + AT_rich Low_complexity Low_complexity 1 33 0 5 1187 347 308 48 0 chr13 78996759 78996863 -41287449 - Lx8 LINE L1 -224 7249 7141 5 1187 310 384 0 0 chr13 78996974 78997107 -41287205 - Lx8 LINE L1 -377 7096 6964 5 1187 887 295 29 46 chr13 78997190 78997535 -41286777 - Lx8 LINE L1 -628 6845 6507 5 1187 807 196 65 92 chr13 78997565 78997691 -41286621 - URR1B DNA MER1_type -45 180 46 5 1187 3815 227 39 55 chr13 78997691 78998609 -41285703 - RMER13B LTR ERVK 0 908 5 5 1187 807 196 65 92 chr13 78998609 78998667 -41285645 - URR1B DNA MER1_type -180 45 1 5 1187 776 283 27 38 chr13 78998681 78998942 -41285370 - Lx8 LINE L1 -992 6481 6224 5 1187 225 164 65 16 chr13 78999081 78999143 -41285169 - L1M4 LINE L1 -701 5470 5406 5 1187 290 232 0 0 chr13 78999133 78999202 -41285110 - L1M4 LINE L1 -904 5242 5174 5 1187 260 369 61 15 chr13 78999204 78999336 -41284976 + MIR SINE MIR 123 260 -2 5 1187 210 271 17 0 chr13 79000182 79000241 -41284071 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 1 1187 204 125 0 0 chr13 79002562 79002594 -41281718 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 2 1187 21 36 0 0 chr13 79003545 79003573 -41280739 + AT_rich Low_complexity Low_complexity 1 28 0 3 1187 1125 117 11 5 chr13 79003955 79004144 -41280168 + L1_Mus4 LINE L1 6440 6629 -7 4 1187 22 0 0 0 chr13 79004144 79004166 -41280146 + AT_rich Low_complexity Low_complexity 1 22 0 5 1187 1109 68 0 0 chr13 79004287 79004434 -41279878 + B1_Mm SINE Alu 1 147 0 6 1187 381 43 0 0 chr13 79005016 79005063 -41279249 + (TTTTG)n Simple_repeat Simple_repeat 4 50 0 7 1187 374 279 151 40 chr13 79005558 79005808 -41278504 + MLT1A0 LTR MaLR 84 374 0 8 1187 1877 63 4 0 chr13 79006464 79006701 -41277611 + L1_Mus1 LINE L1 6328 6565 -2 9 1187 53 57 0 0 chr13 79006969 79007057 -41277255 + AT_rich Low_complexity Low_complexity 1 88 0 1 1187 1181 119 22 0 chr13 79007805 79007990 -41276322 + B2_Mm1t SINE B2 1 189 -4 1 1187 663 216 65 11 chr13 79008062 79008248 -41276064 + Lx7 LINE L1 7522 7696 0 1 1187 29 0 0 0 chr13 79008395 79008424 -41275888 + AT_rich Low_complexity Low_complexity 1 29 0 1 1187 372 178 13 46 chr13 79008639 79008792 -41275520 + GA-rich Low_complexity Low_complexity 2 149 0 1 1187 27 0 0 0 chr13 79009808 79009835 -41274477 + AT_rich Low_complexity Low_complexity 1 27 0 1 1187 250 80 40 0 chr13 79012534 79012584 -41271728 + (TTTTTG)n Simple_repeat Simple_repeat 2 53 0 1 1187 4954 245 38 42 chr13 79013828 79015608 -41268704 + RMER1A Other Other 1 1029 -1 1 1187 27 29 0 0 chr13 79015697 79015731 -41268581 + AT_rich Low_complexity Low_complexity 1 34 0 1 1187 562 318 26 0 chr13 79015826 79016059 -41268253 - L1MC1 LINE L1 -19 6314 6076 1 1187 299 176 0 0 chr13 79016071 79016122 -41268190 - MusHAL1 LINE L1 -1104 1608 1558 2 1187 691 163 132 0 chr13 79016552 79016681 -41267631 - B1_Mus1 SINE Alu -2 146 1 2 1187 231 61 0 0 chr13 79017020 79017053 -41267259 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1187 327 311 101 56 chr13 79017382 79017740 -41266572 + L1ME1 LINE L1 5454 5826 -353 2 1187 252 0 0 0 chr13 79017740 79017768 -41266544 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1187 327 311 101 56 chr13 79017768 79017835 -41266477 + L1ME1 LINE L1 5827 5897 -282 2 1187 488 295 64 45 chr13 79017984 79018296 -41266016 - Lx8 LINE L1 -5 7468 7151 2 1187 236 56 93 0 chr13 79018327 79018381 -41265931 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 2 1187 572 272 88 7 chr13 79018383 79018520 -41265792 - B1_Mur1 SINE Alu 0 149 2 2 1187 587 259 72 31 chr13 79018549 79018744 -41265568 - B3 SINE B2 -13 203 1 2 1187 7132 58 1 3 chr13 79019063 79019971 -41264341 + L1Md_F2 LINE L1 5677 6582 0 2 1187 181 244 0 0 chr13 79020422 79020463 -41263849 + MIRm SINE MIR 234 274 -2 3 1187 268 318 45 9 chr13 79021064 79021175 -41263137 + L2 LINE L2 2795 2909 -510 3 1187 198 415 114 0 chr13 79021487 79021610 -41262702 + L2b LINE L2 3238 3374 -1 3 1187 234 422 39 0 chr13 79021786 79021888 -41262424 + L2 LINE L2 2934 3039 -380 3 1187 1420 300 61 20 chr13 79022789 79023295 -41261017 + MT2A LTR ERVL 1 527 -6 3 1187 420 55 0 0 chr13 79023331 79023386 -41260926 + (CTA)n Simple_repeat Simple_repeat 2 56 0 3 1187 819 333 239 14 chr13 79023440 79024025 -41260287 - MER44C DNA MER2_type -14 719 3 3 1187 5177 196 29 44 chr13 79025690 79027613 -41256699 - Lx2 LINE L1 -6 6991 5095 3 1187 22 0 0 0 chr13 79027818 79027840 -41256472 + AT_rich Low_complexity Low_complexity 1 22 0 3 1187 3221 100 14 12 chr13 79027903 79028387 -41255925 + L1_Mus2 LINE L1 6082 6566 0 3 1187 559 306 138 21 chr13 79028640 79028974 -41255338 + MLT1B LTR MaLR 9 381 -9 3 1187 213 385 20 27 chr13 79029908 79030055 -41254257 + MIRb SINE MIR 96 241 -27 4 1187 228 302 15 98 chr13 79030158 79030274 -41254038 + B1_Mus2 SINE Alu 17 127 -22 4 1187 21 0 0 0 chr13 79030529 79030550 -41253762 + GC_rich Low_complexity Low_complexity 1 21 0 4 1187 263 328 59 25 chr13 79030585 79030704 -41253608 - B3A SINE B2 -26 172 50 4 1187 180 0 0 0 chr13 79031710 79031730 -41252582 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1187 309 109 0 0 chr13 79032020 79032066 -41252246 + (TCCC)n Simple_repeat Simple_repeat 3 48 0 4 1187 862 107 18 12 chr13 79032068 79032400 -41251912 + (TCTA)n Simple_repeat Simple_repeat 1 334 0 4 1187 327 106 88 9 chr13 79032439 79032553 -41251759 + (TCTA)n Simple_repeat Simple_repeat 3 125 0 4 1187 636 14 0 0 chr13 79032587 79032660 -41251652 + (TC)n Simple_repeat Simple_repeat 1 73 0 4 1187 210 299 102 8 chr13 79033136 79033254 -41251058 + ID_B1 SINE B4 94 222 -2 4 1187 209 83 31 62 chr13 79033266 79033330 -41250982 + A-rich Low_complexity Low_complexity 2 63 0 4 1187 216 370 56 49 chr13 79033363 79033525 -41250787 - MIRb SINE MIR -39 229 67 5 1187 345 82 0 0 chr13 79033545 79033594 -41250718 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1187 492 18 0 0 chr13 79033594 79033650 -41250662 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1187 270 0 0 0 chr13 79033884 79033914 -41250398 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1187 2064 141 56 15 chr13 79034470 79034880 -41249432 + MYSERV16_I-int LTR ERVK 1899 2325 -1 5 1187 934 229 125 64 chr13 79034891 79035055 -41249257 + RLTR20A LTR ERVK 11 163 -378 5 1187 288 0 0 0 chr13 79035055 79035087 -41249225 + (GA)n Simple_repeat Simple_repeat 1 32 0 5 1187 934 229 125 64 chr13 79035087 79035234 -41249078 + RLTR20A LTR ERVK 164 340 -201 5 1187 186 71 0 0 chr13 79035234 79035262 -41249050 + (TTG)n Simple_repeat Simple_repeat 2 29 0 5 148 8071 42 6 0 chr13 79035267 79036447 -41247865 - L1Md_F3 LINE L1 -14 6570 5384 5 1188 415 221 200 29 chr13 79036447 79036539 -41247773 + RLTR20A LTR ERVK 338 453 -98 5 1188 597 49 0 0 chr13 79036539 79036620 -41247692 + (TG)n Simple_repeat Simple_repeat 1 81 0 5 1188 415 221 200 29 chr13 79036620 79036667 -41247645 + RLTR20A LTR ERVK 454 500 -51 5 1188 181 293 17 0 chr13 79036891 79036949 -41247363 + L4 LINE RTE 1958 2016 -13 5 1188 619 296 21 43 chr13 79038399 79038586 -41245726 - B3A SINE B2 0 198 16 6 1188 484 299 106 28 chr13 79039405 79039673 -41244639 - MTEb LTR MaLR -27 352 1 6 1188 2135 311 80 48 chr13 79039675 79040715 -41243597 - MTEb-int LTR MaLR -2 1578 405 6 1188 573 316 26 5 chr13 79040792 79040986 -41243326 - MTEa LTR MaLR -181 198 1 6 1188 3235 205 60 6 chr13 79041643 79042420 -41241892 - Lx5 LINE L1 -1136 5914 5088 6 1188 450 0 0 0 chr13 79043384 79043434 -41240878 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1188 218 342 26 26 chr13 79044235 79044352 -41239960 - PB1D10 SINE Alu 0 117 1 6 1188 514 349 46 32 chr13 79044856 79045140 -41239172 - MLT1C LTR MaLR -18 449 162 6 1188 28 29 0 0 chr13 79045226 79045261 -41239051 + AT_rich Low_complexity Low_complexity 1 35 0 6 1188 5803 58 1 8 chr13 79045742 79046491 -41237821 + L1Md_F2 LINE L1 5827 6570 -12 6 1188 1057 181 58 33 chr13 79046776 79047016 -41237296 + Lx5 LINE L1 6732 6977 -73 6 1188 558 0 0 0 chr13 79048170 79048232 -41236080 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1188 1946 101 123 3 chr13 79050987 79051305 -41233007 - Lx2 LINE L1 0 6997 6642 7 1188 2283 89 76 50 chr13 79051416 79051796 -41232516 - RLTR10 LTR ERVK 0 390 1 7 1188 181 273 0 0 chr13 79053176 79053220 -41231092 - MIR SINE MIR -67 141 98 7 1188 391 349 114 18 chr13 79053271 79053551 -41230761 + MER102b DNA MER1_type 30 336 -5 7 1188 230 302 62 0 chr13 79053623 79053719 -41230593 - LTR79 LTR ERVL -77 450 349 7 1188 767 282 22 11 chr13 79053891 79054074 -41230238 + B3 SINE B2 2 186 -30 7 1188 204 40 0 0 chr13 79054084 79054109 -41230203 + (TG)n Simple_repeat Simple_repeat 2 26 0 7 1188 458 221 115 26 chr13 79054884 79055075 -41229237 + L1M2 LINE L1 4338 4545 -1598 7 1188 750 208 8 52 chr13 79055068 79055332 -41228980 - RMER1B Other Other -1 1065 792 7 1188 477 0 0 0 chr13 79056052 79056105 -41228207 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 8 1188 276 269 32 21 chr13 79056252 79056347 -41227965 - L1_Mm LINE L1 -427 5456 5361 8 1188 733 324 58 93 chr13 79056781 79057295 -41227017 - Lx8 LINE L1 -458 7015 6520 8 1188 1764 259 72 10 chr13 79057293 79057905 -41226407 + L1_Mur3 LINE L1 3550 4199 -1681 8 1188 367 196 29 18 chr13 79057905 79058076 -41226236 + (TA)n Simple_repeat Simple_repeat 2 174 0 8 1188 208 190 17 17 chr13 79058952 79059011 -41225301 + A-rich Low_complexity Low_complexity 5 63 0 8 1188 493 269 72 8 chr13 79060948 79061199 -41223113 - L1MC3 LINE L1 -2 7783 7517 8 1188 738 307 80 65 chr13 79061370 79062046 -41222266 - L1MC3 LINE L1 -279 7506 6821 8 1188 306 314 43 21 chr13 79062187 79062327 -41221985 - L1MC3 LINE L1 -1224 6561 6419 8 1188 524 77 13 0 chr13 79062327 79062405 -41221907 + (TCTCCC)n Simple_repeat Simple_repeat 4 82 0 8 1188 180 111 0 0 chr13 79062405 79062432 -41221880 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 1188 1372 348 83 9 chr13 79062500 79062759 -41221553 + Lx8 LINE L1 6348 6607 -866 8 1188 1118 185 391 7 chr13 79062759 79063063 -41221249 + MTC LTR MaLR 1 421 0 9 1188 1372 348 83 9 chr13 79063063 79063439 -41220873 + Lx8 LINE L1 6608 7030 -443 8 1188 469 335 37 11 chr13 79063508 79063759 -41220553 - L1MC3 LINE L1 -1753 6032 5780 8 1188 1906 80 0 0 chr13 79063759 79064010 -41220302 + L1_Mus1 LINE L1 6317 6567 0 9 1188 469 335 37 11 chr13 79064010 79064135 -41220177 - L1MC3 LINE L1 -2006 5779 5647 8 1188 323 323 109 38 chr13 79064135 79064482 -41219830 - L1MC3 LINE L1 -621 5712 5341 8 1188 356 350 80 21 chr13 79064542 79064916 -41219396 - L1MC3 LINE L1 -863 5283 4888 8 1188 2707 159 42 8 chr13 79065145 79065639 -41218673 - Lx4A LINE L1 -1 7057 6547 9 1188 662 350 0 0 chr13 79065765 79065985 -41218327 + Lx8 LINE L1 6701 6920 -553 9 1188 874 334 47 25 chr13 79065985 79066458 -41217854 - Lx9 LINE L1 -187 7457 6975 9 1188 1184 254 24 4 chr13 79066458 79066702 -41217610 + MTC LTR MaLR 126 374 -47 9 1188 1376 194 97 61 chr13 79066702 79066854 -41217458 + ORR1C1 LTR MaLR 1 181 -197 9 1188 711 0 0 0 chr13 79066854 79066933 -41217379 + (TC)n Simple_repeat Simple_repeat 1 79 0 9 1188 1376 194 97 61 chr13 79066933 79067142 -41217170 + ORR1C1 LTR MaLR 182 375 -3 9 1188 313 135 0 19 chr13 79067145 79067198 -41217114 + MTC LTR MaLR 370 421 0 9 1188 344 264 11 0 chr13 79067367 79067454 -41216858 - B3 SINE B2 -121 95 8 9 1188 1398 276 99 32 chr13 79067655 79068209 -41216103 - Lx8 LINE L1 -4 7469 6879 9 1188 187 114 22 22 chr13 79068210 79068255 -41216057 + CT-rich Low_complexity Low_complexity 4 48 0 1 1188 230 299 115 58 chr13 79068748 79068922 -41215390 - L1MCb LINE L1 -5679 366 183 1 1188 25 75 0 0 chr13 79069775 79069828 -41214484 + AT_rich Low_complexity Low_complexity 1 53 0 1 1188 6859 113 24 24 chr13 79070729 79071010 -41213302 - L1_Mur1 LINE L1 -736 5150 4875 1 1188 1061 57 0 7 chr13 79071010 79071152 -41213160 + (TTTTC)n Simple_repeat Simple_repeat 2 142 0 1 1188 6859 113 24 24 chr13 79071152 79071995 -41212317 - L1_Mur1 LINE L1 -1012 4874 4026 1 1188 3084 153 0 45 chr13 79071995 79072551 -41211761 + Lx3B LINE L1 6443 6973 0 1 1188 186 43 0 0 chr13 79072557 79072580 -41211732 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 1188 2255 37 7 0 chr13 79072648 79072919 -41211393 - L1Md_F3 LINE L1 -2 6582 6310 1 1188 490 273 159 40 chr13 79073101 79073353 -41210959 - B4A SINE B4 -6 286 5 1 1188 25 0 0 0 chr13 79073355 79073380 -41210932 + AT_rich Low_complexity Low_complexity 1 25 0 1 1188 24 0 0 0 chr13 79076417 79076441 -41207871 + AT_rich Low_complexity Low_complexity 1 24 0 1 1188 24 53 0 0 chr13 79078395 79078433 -41205879 + AT_rich Low_complexity Low_complexity 1 38 0 1 1188 26 30 0 0 chr13 79078509 79078542 -41205770 + AT_rich Low_complexity Low_complexity 1 33 0 1 1188 414 327 77 12 chr13 79079193 79079363 -41204949 - MER58C DNA MER1_type -6 209 29 1 1188 28 48 0 0 chr13 79079619 79079661 -41204651 + AT_rich Low_complexity Low_complexity 1 42 0 1 1188 207 88 0 0 chr13 79079807 79079841 -41204471 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1188 719 146 8 0 chr13 79082019 79082149 -41202163 + CT-rich Low_complexity Low_complexity 2 132 0 1 1188 23 0 0 0 chr13 79083387 79083410 -41200902 + AT_rich Low_complexity Low_complexity 1 23 0 1 1188 279 54 0 0 chr13 79084753 79084790 -41199522 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1 1188 35219 51 1 4 chr13 79084955 79090646 -41193666 + L1Md_T LINE L1 1 5588 -298 1 1188 8412 34 0 0 chr13 79090647 79091643 -41192669 + L1Md_T LINE L1 5590 6585 0 1 1188 26 30 0 0 chr13 79094669 79094702 -41189610 + AT_rich Low_complexity Low_complexity 1 33 0 1 1188 319 340 0 28 chr13 79095941 79096047 -41188265 - B1F SINE Alu -37 112 10 1 1188 1188 168 59 5 chr13 79096100 79096303 -41188009 + Lx3C LINE L1 6698 6911 -65 1 1188 3856 53 6 2 chr13 79096635 79097126 -41187186 - L1Md_F2 LINE L1 -3 6579 6087 1 1188 311 145 14 0 chr13 79097294 79097363 -41186949 + CT-rich Low_complexity Low_complexity 2 71 0 1 1188 235 176 0 38 chr13 79098029 79098082 -41186230 + CT-rich Low_complexity Low_complexity 2 52 0 1 1188 3512 154 24 21 chr13 79098086 79098702 -41185610 - Lx3A LINE L1 -5 6976 6359 1 1188 1158 151 0 5 chr13 79098755 79098955 -41185357 - Lx3A LINE L1 0 6981 6783 1 1188 336 330 11 38 chr13 79100562 79100745 -41183567 + CT-rich Low_complexity Low_complexity 1 178 0 1 1188 297 241 58 43 chr13 79101143 79101282 -41183030 + Lx9 LINE L1 7503 7643 -1 1 1188 279 283 8 20 chr13 79101470 79101555 -41182757 + B4 SINE B4 207 288 -4 1 1188 414 0 0 0 chr13 79101587 79101633 -41182679 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1188 22 0 0 0 chr13 79101950 79101972 -41182340 + AT_rich Low_complexity Low_complexity 1 22 0 1 1188 376 323 96 30 chr13 79102078 79102276 -41182036 - Lx8 LINE L1 -85 7388 7178 1 1188 249 57 0 0 chr13 79102534 79102569 -41181743 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1188 29 60 0 0 chr13 79102600 79102650 -41181662 + AT_rich Low_complexity Low_complexity 1 50 0 1 1188 548 29 0 14 chr13 79103213 79103284 -41181028 + (TTTTC)n Simple_repeat Simple_repeat 2 71 0 1 1188 490 319 134 26 chr13 79103548 79103746 -41180566 - MTD LTR MaLR 0 419 199 1 1188 211 28 56 0 chr13 79103746 79103782 -41180530 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1188 490 319 134 26 chr13 79103782 79103889 -41180423 - MTD LTR MaLR -221 198 82 1 1188 476 309 63 11 chr13 79104437 79104627 -41179685 + RMER15 LTR ERVL 374 573 -2 1 1188 25926 73 154 18 chr13 79104735 79109265 -41175047 + L1Md_F3 LINE L1 233 5585 -298 1 1188 7913 47 2 2 chr13 79109266 79110250 -41174062 + L1Md_F3 LINE L1 5587 6570 -14 1 1188 1156 239 128 8 chr13 79110968 79111326 -41172986 - Lx9 LINE L1 -14 7630 7230 1 1188 1933 236 53 4 chr13 79111323 79111791 -41172521 + Lx9 LINE L1 6647 7137 -507 1 1188 603 0 0 0 chr13 79111871 79111938 -41172374 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 1188 213 338 114 47 chr13 79112083 79112319 -41171993 + L2 LINE L2 2367 2618 -801 1 1188 5585 100 21 11 chr13 79112319 79112685 -41171627 - MusHAL1 LINE L1 -1469 1243 872 1 1188 180 77 0 0 chr13 79112685 79112711 -41171601 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1188 5585 100 21 11 chr13 79112711 79113231 -41171081 - MusHAL1 LINE L1 -1841 871 348 1 1188 543 342 136 8 chr13 79113280 79113634 -41170678 + L2 LINE L2 2212 2610 -809 1 1188 239 315 33 0 chr13 79113662 79113754 -41170558 - MER45A DNA Tip100 -9 169 75 1 1188 440 322 128 68 chr13 79113863 79114113 -41170199 - MER47B DNA MER2_type -126 292 28 1 1188 570 67 0 0 chr13 79114290 79114365 -41169947 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 1188 339 25 0 0 chr13 79114629 79114669 -41169643 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1188 232 320 40 0 chr13 79115064 79115139 -41169173 - ID4 SINE ID -4 79 2 1 1188 518 328 0 14 chr13 79115146 79115285 -41169027 - ID_B1 SINE B4 -9 215 79 1 1188 1527 232 59 6 chr13 79115589 79115944 -41168368 - ORR1D1 LTR MaLR 0 374 1 1 1188 907 236 17 128 chr13 79117458 79117880 -41166432 - RMER17C LTR ERVK -35 375 1 1 1188 658 169 64 25 chr13 79117888 79118124 -41166188 - RMER17C-int LTR ERVK 0 3238 2900 1 1188 378 0 0 0 chr13 79118124 79118166 -41166146 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1188 7092 174 63 55 chr13 79118168 79119872 -41164440 - RMER17C-int LTR ERVK -424 2814 1097 1 1188 329 299 30 59 chr13 79120522 79120657 -41163655 - RMER17C-int LTR ERVK -2711 527 397 1 1188 539 40 14 0 chr13 79120813 79120887 -41163425 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1188 591 245 55 17 chr13 79120890 79120932 -41163380 - RMER17C LTR ERVK -164 246 201 1 1188 1074 135 0 0 chr13 79120932 79121110 -41163202 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 1 1188 591 245 55 17 chr13 79121110 79121304 -41163008 - RMER17C LTR ERVK -210 200 2 1 1188 771 11 0 0 chr13 79121897 79121985 -41162327 + (GAAA)n Simple_repeat Simple_repeat 4 91 0 1 1188 425 19 0 18 chr13 79121987 79122042 -41162270 + (GGGA)n Simple_repeat Simple_repeat 3 56 0 1 1188 1001 113 0 6 chr13 79123135 79123295 -41161017 + (TA)n Simple_repeat Simple_repeat 2 160 0 1 1188 556 143 0 0 chr13 79123379 79123477 -41160835 - Lx4B LINE L1 -307 6751 6654 1 1188 342 303 64 106 chr13 79123479 79123715 -41160597 - B4A SINE B4 -66 226 1 1 1188 184 77 51 0 chr13 79124394 79124433 -41159879 + (TA)n Simple_repeat Simple_repeat 1 41 0 1 1188 2337 195 71 63 chr13 79125028 79125651 -41158661 - RMER17B LTR ERVK -327 631 4 1 1188 22 0 0 0 chr13 79126719 79126741 -41157571 + AT_rich Low_complexity Low_complexity 1 22 0 1 1188 405 0 0 0 chr13 79126937 79126982 -41157330 + (TA)n Simple_repeat Simple_repeat 2 46 0 1 1188 779 254 45 5 chr13 79127745 79127947 -41156365 + B3 SINE B2 2 211 -5 1 1188 21 0 0 0 chr13 79127950 79127971 -41156341 + AT_rich Low_complexity Low_complexity 1 21 0 1 1188 891 78 78 0 chr13 79127971 79128099 -41156213 + B1_Mus1 SINE Alu 2 139 -9 1 1188 248 49 49 0 chr13 79128099 79128140 -41156172 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1188 189 0 0 0 chr13 79128560 79128581 -41155731 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 1 1188 223 233 0 0 chr13 79128959 79129002 -41155310 + (TGG)n Simple_repeat Simple_repeat 3 45 0 1 1188 280 341 180 24 chr13 79129204 79129459 -41154853 + L2c LINE L2 3024 3318 -69 1 1188 409 245 4 8 chr13 79129842 79130093 -41154219 + (TG)n Simple_repeat Simple_repeat 1 249 0 1 1188 274 356 0 94 chr13 79130096 79130223 -41154089 - B4A SINE B4 0 292 178 1 1188 357 193 11 0 chr13 79130238 79130326 -41153986 - RCHARR1 DNA MER1_type -117 857 769 1 1188 226 273 144 48 chr13 79130375 79130479 -41153833 - B1F2 SINE Alu -23 126 13 1 1188 473 318 96 32 chr13 79130402 79130558 -41153754 - B4A SINE B4 -122 170 5 1 1188 2182 119 65 18 chr13 79131601 79131987 -41152325 + RLTR9E LTR ERVK 6 409 0 1 1188 1492 132 0 24 chr13 79132011 79132266 -41152046 - Lx LINE L1 0 6654 6406 1 1188 5266 79 30 35 chr13 79132268 79133041 -41151271 + RLTR13C2 LTR ERVK 1 769 -39 1 1188 1506 102 0 0 chr13 79133098 79133313 -41150999 - Lx LINE L1 -245 6409 6195 1 1188 21 95 0 0 chr13 79133657 79133720 -41150592 + AT_rich Low_complexity Low_complexity 1 63 0 1 1188 21 0 0 0 chr13 79133808 79133829 -41150483 + AT_rich Low_complexity Low_complexity 1 21 0 1 1188 24 0 0 0 chr13 79133897 79133921 -41150391 + AT_rich Low_complexity Low_complexity 1 24 0 1 1188 25 31 0 0 chr13 79134799 79134831 -41149481 + AT_rich Low_complexity Low_complexity 1 32 0 1 1188 990 220 37 10 chr13 79135762 79135923 -41148389 - Lx9 LINE L1 -1 7643 7478 1 1188 432 0 0 0 chr13 79135923 79135971 -41148341 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1188 990 220 37 10 chr13 79135971 79136108 -41148204 - Lx9 LINE L1 -167 7477 7337 1 1188 625 348 72 26 chr13 79136297 79136645 -41147667 - MLT1D LTR MaLR -139 366 3 1 1188 555 16 0 0 chr13 79136918 79136982 -41147330 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 1188 2913 58 48 3 chr13 79137099 79137478 -41146834 + MTA_Mm LTR MaLR 1 396 0 1 1188 279 0 0 0 chr13 79137825 79137856 -41146456 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1188 1070 263 82 0 chr13 79140118 79140388 -41143924 - RMER1C Other Other -13 1329 1038 1 1188 7023 96 38 3 chr13 79140388 79141560 -41142752 + L1_Mus4 LINE L1 5420 6629 -7 1 1188 1791 259 61 58 chr13 79141563 79142154 -41142158 - RMER1C Other Other -307 1035 443 1 1188 1068 133 66 6 chr13 79142308 79142489 -41141823 - B2_Mm2 SINE B2 -2 193 2 1 1188 266 343 0 47 chr13 79143033 79143140 -41141172 + L3 LINE CR1 4176 4277 -212 1 1188 275 0 29 0 chr13 79143417 79143452 -41140860 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 1188 263 278 106 68 chr13 79143868 79144100 -41140212 + RMER13A LTR ERVK 1 291 -225 1 1188 865 257 168 37 chr13 79145457 79145784 -41138528 + ORR1D2 LTR MaLR 1 370 0 1 1188 3713 183 20 9 chr13 79147939 79148638 -41135674 + L1_Mur1 LINE L1 5171 5877 -9 1 1188 6786 59 9 1 chr13 79148652 79149592 -41134720 - L1Md_F2 LINE L1 -631 5951 5004 1 1188 4326 85 14 10 chr13 79149593 79150220 -41134092 + L1Md_F2 LINE L1 5953 6582 0 1 1188 995 47 8 0 chr13 79150682 79150811 -41133501 + (GA)n Simple_repeat Simple_repeat 1 130 0 2 1188 658 180 39 0 chr13 79150925 79151053 -41133259 - RMER5 LTR ERV1 -13 521 389 2 1188 1028 282 56 47 chr13 79151056 79151588 -41132724 - Lx9 LINE L1 -2 7642 7106 2 1188 21 36 0 0 chr13 79151661 79151689 -41132623 + AT_rich Low_complexity Low_complexity 1 28 0 2 1188 7022 92 15 9 chr13 79153367 79154581 -41129731 - L1_Mus2 LINE L1 -1 6565 5342 2 1188 13970 118 16 5 chr13 79154576 79156821 -41127491 - L1Md_F LINE L1 -393 3424 1165 2 1188 186 43 0 0 chr13 79156821 79156844 -41127468 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2 1188 13970 210 30 70 chr13 79156844 79157764 -41126548 - L1Md_F LINE L1 -5373 1164 255 2 1188 634 195 32 0 chr13 79159266 79159420 -41124892 - Lx2A1 LINE L1 -4 7004 6846 2 1188 3551 33 28 5 chr13 79159729 79160155 -41124157 - RLTR10C LTR ERVK 0 436 1 2 1188 285 233 28 55 chr13 79160279 79160332 -41123980 + Lx9 LINE L1 7360 7411 -233 2 1188 3155 55 2 8 chr13 79160332 79160734 -41123578 - MTB LTR MaLR 0 400 1 2 1188 285 233 28 55 chr13 79160734 79160789 -41123523 + Lx9 LINE L1 7412 7465 -179 2 1188 303 71 0 0 chr13 79160792 79160834 -41123478 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1188 324 0 0 0 chr13 79160834 79160869 -41123443 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1188 455 192 0 9 chr13 79160898 79161003 -41123309 + Lx9 LINE L1 7541 7644 0 2 1188 502 331 86 53 chr13 79161234 79161821 -41122491 + RMER20A LTR ERVK 38 681 -227 2 1188 312 235 127 15 chr13 79162859 79162993 -41121319 - L1MEg LINE L1 -4132 1952 1804 2 1188 1313 65 11 11 chr13 79163009 79163368 -41120944 + (TTTCC)n Simple_repeat Simple_repeat 1 359 0 2 1188 769 207 7 0 chr13 79163767 79163902 -41120410 - B1_Mm SINE Alu -6 141 6 2 1188 201 39 0 0 chr13 79163902 79163928 -41120384 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 2 1188 189 51 77 0 chr13 79164054 79164093 -41120219 + (TTG)n Simple_repeat Simple_repeat 2 43 0 2 1188 309 89 0 0 chr13 79164974 79165019 -41119293 + (CA)n Simple_repeat Simple_repeat 1 45 0 2 1188 190 267 11 75 chr13 79166662 79166755 -41117557 - L3 LINE CR1 -1610 2879 2793 2 1189 1412 98 31 18 chr13 79168486 79168715 -41115597 - L1_Mus3 LINE L1 -6 6632 6401 2 1189 691 47 0 0 chr13 79168715 79168800 -41115512 + L1_Mus3 LINE L1 6274 6358 -280 2 1189 414 295 145 0 chr13 79169542 79169749 -41114563 + Lx9 LINE L1 7241 7477 -167 2 1189 623 211 29 22 chr13 79170193 79170329 -41113983 + B1_Mur2 SINE Alu 13 149 0 2 1189 213 268 36 0 chr13 79171558 79171614 -41112698 + B1F SINE Alu 12 69 -80 2 1189 4612 200 48 10 chr13 79171614 79172614 -41111698 + Lx4B LINE L1 6021 7058 0 2 1189 7459 74 9 8 chr13 79172647 79173710 -41110602 + L1_Mus1 LINE L1 5502 6566 -1 2 1189 581 332 124 43 chr13 79175510 79175928 -41108384 + MARNA DNA Mariner 76 527 -59 2 1189 235 227 69 111 chr13 79176615 79176759 -41107553 - Charlie9 DNA MER1_type -525 2232 2095 2 1189 387 0 0 0 chr13 79176830 79176873 -41107439 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1189 1211 91 57 6 chr13 79176955 79177132 -41107180 + B2_Mm2 SINE B2 1 186 -9 2 1189 725 259 143 8 chr13 79177163 79177408 -41106904 + MTD LTR MaLR 46 323 -96 2 1189 298 270 152 9 chr13 79177376 79177488 -41106824 + MTE2b LTR MaLR 252 379 0 2 1189 1149 97 0 0 chr13 79178063 79178228 -41106084 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 2 1189 1134 313 51 44 chr13 79178263 79178698 -41105614 - Lx8 LINE L1 -10 7463 7026 2 1189 5046 77 3 0 chr13 79178707 79179372 -41104940 - L1_Mus3 LINE L1 -15 6623 5957 2 1189 7361 131 9 3 chr13 79179372 79180649 -41103663 + L1_Mus3 LINE L1 4643 5928 -710 2 1189 584 196 124 5 chr13 79180918 79180972 -41103340 + Lx9 LINE L1 7437 7493 -151 2 1189 207 100 0 0 chr13 79180972 79181002 -41103310 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1189 584 196 124 5 chr13 79181002 79181132 -41103180 + Lx9 LINE L1 7494 7642 -2 2 1189 459 339 45 75 chr13 79181519 79181854 -41102458 + MLT1A0 LTR MaLR 18 342 -23 2 1189 281 331 88 29 chr13 79182093 79182264 -41102048 - MLT1C LTR MaLR -224 243 63 2 1189 1111 170 13 9 chr13 79182568 79182793 -41101519 + Lx2B LINE L1 6774 6999 -1 2 1189 1524 279 27 25 chr13 79182996 79183445 -41100867 + Lx6 LINE L1 7000 7449 -11 2 1189 330 26 0 0 chr13 79187220 79187259 -41097053 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1189 221 234 21 0 chr13 79188904 79188951 -41095361 + C-rich Low_complexity Low_complexity 3 50 0 2 1189 1382 75 10 3 chr13 79188951 79189256 -41095056 + (TTC)n Simple_repeat Simple_repeat 1 306 0 2 1189 758 192 133 38 chr13 79189267 79189478 -41094834 - RMER4B LTR ERVK -338 247 17 2 1189 21 0 0 0 chr13 79189650 79189671 -41094641 + AT_rich Low_complexity Low_complexity 1 21 0 2 1189 25 65 0 0 chr13 79193000 79193046 -41091266 + AT_rich Low_complexity Low_complexity 1 46 0 2 1189 25 51 0 0 chr13 79193221 79193260 -41091052 + AT_rich Low_complexity Low_complexity 1 39 0 2 1189 447 113 0 0 chr13 79193303 79193374 -41090938 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1189 731 245 141 0 chr13 79194968 79195217 -41089095 - Lx9 LINE L1 -2 7642 7359 2 1189 231 313 65 75 chr13 79195576 79195683 -41088629 + PB1D10 SINE Alu 1 106 -11 2 1189 250 117 50 0 chr13 79195684 79195744 -41088568 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 2 1189 395 38 0 19 chr13 79195747 79195801 -41088511 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1189 423 0 0 0 chr13 79195801 79195847 -41088465 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1189 207 317 0 0 chr13 79196749 79196809 -41087503 - L2a LINE L2 -302 3124 3065 2 1189 756 205 0 0 chr13 79197023 79197194 -41087118 + GA-rich Low_complexity Low_complexity 2 172 0 2 1189 467 245 62 107 chr13 79198357 79198388 -41085924 + B4 SINE B4 54 213 -79 2 1189 973 77 7 47 chr13 79198388 79198518 -41085794 + B1_Mus1 SINE Alu 6 135 -13 2 1189 280 0 0 48 chr13 79198518 79198560 -41085752 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 2 1189 189 0 0 0 chr13 79198560 79198581 -41085731 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1189 467 245 62 107 chr13 79198581 79198596 -41085716 + B4 SINE B4 214 222 -70 2 1189 202 146 24 0 chr13 79199375 79199416 -41084896 + T-rich Low_complexity Low_complexity 3 44 0 2 1189 203 204 18 36 chr13 79199575 79199631 -41084681 + (TTTA)n Simple_repeat Simple_repeat 4 58 0 2 1189 548 255 7 7 chr13 79199632 79199774 -41084538 - B1_Mus1 SINE Alu -6 142 1 2 1189 209 319 71 50 chr13 79199870 79199969 -41084343 - MIR SINE MIR -137 125 25 2 1189 840 316 47 69 chr13 79200753 79201158 -41083154 - MTD LTR MaLR -23 396 1 2 1189 24 53 0 0 chr13 79201534 79201572 -41082740 + AT_rich Low_complexity Low_complexity 1 38 0 2 1189 1693 16 0 0 chr13 79201572 79201761 -41082551 - B2_Mm1a SINE B2 -3 190 2 2 1189 1956 202 45 9 chr13 79201770 79202189 -41082123 - Lx2B LINE L1 -4 6996 6563 2 1189 180 0 0 0 chr13 79202904 79202924 -41081388 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1189 1175 62 0 0 chr13 79202924 79203070 -41081242 - B1_Mus2 SINE Alu 0 147 2 2 1189 25 31 0 0 chr13 79204781 79204813 -41079499 + AT_rich Low_complexity Low_complexity 1 32 0 2 1189 25 31 0 0 chr13 79204845 79204877 -41079435 + AT_rich Low_complexity Low_complexity 1 32 0 2 1189 462 65 0 0 chr13 79205649 79205711 -41078601 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1189 243 360 0 0 chr13 79206876 79206951 -41077361 + (CACG)n Simple_repeat Simple_repeat 4 78 0 2 1189 189 0 0 0 chr13 79208101 79208122 -41076190 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1189 12202 152 35 61 chr13 79208375 79211586 -41072726 - Lx LINE L1 -273 6381 3265 2 1189 31 26 0 0 chr13 79212977 79213015 -41071297 + AT_rich Low_complexity Low_complexity 1 38 0 2 1189 1023 83 0 0 chr13 79213039 79213195 -41071117 + (TCTA)n Simple_repeat Simple_repeat 3 158 0 2 1189 369 0 0 0 chr13 79215106 79215147 -41069165 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1189 384 88 0 0 chr13 79215147 79215203 -41069109 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1189 1167 208 5 0 chr13 79216359 79216580 -41067732 - URR1B DNA MER1_type -2 223 2 2 1189 22 0 0 0 chr13 79217002 79217024 -41067288 + AT_rich Low_complexity Low_complexity 1 22 0 2 1189 26 0 0 0 chr13 79217311 79217337 -41066975 + AT_rich Low_complexity Low_complexity 1 26 0 2 1189 200 306 106 44 chr13 79217601 79217714 -41066598 + L2a LINE L2 3304 3423 -3 2 1189 6630 140 18 2 chr13 79217902 79219267 -41065045 + Lx2 LINE L1 5237 6622 -375 2 1189 2180 144 13 13 chr13 79219589 79219969 -41064343 + Lx2 LINE L1 6617 6996 -1 2 1189 516 105 0 0 chr13 79219969 79220045 -41064267 + (GAAA)n Simple_repeat Simple_repeat 1 76 0 2 1189 28663 92 20 14 chr13 79220045 79225559 -41058753 + L1Md_F2 LINE L1 377 6046 -930 2 1189 575 252 47 16 chr13 79225841 79225970 -41058342 - ETnERV2-int LTR ERVK -204 7202 7070 2 1189 4706 77 21 27 chr13 79225971 79226638 -41057674 + L1Md_F2 LINE L1 5920 6582 0 2 1189 1361 151 4 0 chr13 79227586 79227818 -41056494 - Lx2 LINE L1 0 6997 6765 2 1189 6257 158 23 5 chr13 79227818 79229162 -41055150 - Lx2 LINE L1 -363 6634 5255 2 1189 8364 94 5 11 chr13 79229160 79230446 -41053866 - MusHAL1 LINE L1 -1412 1300 22 2 1189 749 195 114 105 chr13 79230469 79230784 -41053528 + MYSERV16_I-int LTR ERVK 2003 2320 -6 2 1189 1617 153 22 19 chr13 79230790 79231102 -41053210 + BGLII_Mus LTR ERVK 1 313 -109 2 1189 5831 80 12 1 chr13 79231106 79231874 -41052438 + L1_Mus3 LINE L1 5731 6506 -132 2 1189 765 239 30 74 chr13 79231876 79232147 -41052165 + BGLII LTR ERVK 163 421 0 2 1189 3897 120 46 68 chr13 79232147 79232423 -41051889 - L1VL4 LINE L1 -5428 874 614 2 1189 1332 134 49 9 chr13 79232423 79232649 -41051663 - L1Md_F2 LINE L1 0 6582 6348 2 1189 3897 120 46 68 chr13 79232649 79233068 -41051244 - L1VL4 LINE L1 -5689 613 194 2 1189 213 39 0 0 chr13 79233451 79233477 -41050835 + (T)n Simple_repeat Simple_repeat 1 26 0 2 1189 192 254 58 29 chr13 79233499 79233568 -41050744 + MIR3 SINE MIR 125 195 -13 2 1189 1000 197 56 0 chr13 79233792 79234005 -41050307 + Lx2B LINE L1 6772 6996 -4 2 1189 818 338 25 14 chr13 79234200 79234557 -41049755 + Lx9 LINE L1 7100 7460 -184 3 1189 23 54 0 0 chr13 79234673 79234710 -41049602 + AT_rich Low_complexity Low_complexity 1 37 0 3 1189 1627 159 7 0 chr13 79236302 79236591 -41047721 - Lx2 LINE L1 -1 6996 6706 3 1189 1994 325 73 51 chr13 79236658 79237733 -41046579 - Lx8 LINE L1 -3 7470 6372 3 1189 352 206 0 88 chr13 79237764 79237844 -41046468 + MTD LTR MaLR 47 119 -300 3 1189 194 128 26 0 chr13 79237846 79237885 -41046427 + CT-rich Low_complexity Low_complexity 1 40 0 3 1189 3758 165 50 20 chr13 79237903 79238699 -41045613 - L1_Mur2 LINE L1 -1358 4522 3703 3 1189 4125 47 0 2 chr13 79238688 79239184 -41045128 - L1Md_F2 LINE L1 -10 6572 6078 3 1189 5018 213 110 8 chr13 79239193 79240513 -41043799 - L1_Mur2 LINE L1 -2165 3712 2259 3 1189 1856 153 44 6 chr13 79240607 79240922 -41043390 + ORR1A2 LTR MaLR 1 327 0 3 1189 1013 289 81 49 chr13 79241594 79241771 -41042541 - Lx8 LINE L1 -1109 6364 6187 3 1189 210 37 0 0 chr13 79241771 79241798 -41042514 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1189 1013 280 67 35 chr13 79241798 79242231 -41042081 - Lx8 LINE L1 -1287 6186 5734 3 1189 642 295 29 81 chr13 79242669 79243078 -41041234 - Lx8 LINE L1 -143 5704 5317 3 1189 21 36 0 0 chr13 79243418 79243446 -41040866 + AT_rich Low_complexity Low_complexity 1 28 0 3 1189 3267 204 97 47 chr13 79243631 79244486 -41039826 + RMER13B LTR ERVK 1 898 -10 3 1189 14271 176 40 12 chr13 79244854 79247768 -41036544 + L1_Mur1 LINE L1 2708 5702 -184 3 1189 8507 132 36 14 chr13 79247892 79250010 -41034302 + L1VL4 LINE L1 163 2318 -1241 3 1189 541 358 37 35 chr13 79250106 79250672 -41033640 + RLTR6-int LTR ERV1 2356 3032 -4746 3 1189 1575 306 66 81 chr13 79250684 79252520 -41031792 + MuRRS4-int LTR ERV1 2508 5577 -2024 3 1189 921 301 16 30 chr13 79252798 79253164 -41031148 + RLTR6-int LTR ERV1 7328 7688 -90 3 1189 1163 94 0 6 chr13 79253310 79253491 -41030821 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1189 5817 161 32 18 chr13 79253507 79254581 -41029731 + Lx2 LINE L1 5908 6996 -1 3 1189 4008 95 10 6 chr13 79255113 79255896 -41028416 - L1_Mus3 LINE L1 -550 6508 5377 3 1189 1118 114 79 5 chr13 79255896 79256099 -41028213 + L1_Mus3 LINE L1 6421 6638 0 3 1189 227 331 121 36 chr13 79256253 79256419 -41027893 + MTE2a LTR MaLR 170 349 -30 3 1189 805 102 48 0 chr13 79256423 79256570 -41027742 - L1_Mus3 LINE L1 0 6638 6485 3 1189 22 35 0 0 chr13 79257573 79257602 -41026710 + AT_rich Low_complexity Low_complexity 1 29 0 3 1189 538 342 15 34 chr13 79257677 79257883 -41026429 - B3 SINE B2 -12 204 3 3 1189 304 191 65 87 chr13 79258412 79258504 -41025808 - PB1 SINE Alu -3 124 35 3 1189 1759 279 130 22 chr13 79259864 79260589 -41023723 + Lx8 LINE L1 6662 7464 -9 3 1189 842 306 27 10 chr13 79260636 79260936 -41023376 + Lx6 LINE L1 7136 7440 -20 3 1189 234 179 0 0 chr13 79261407 79261446 -41022866 - MIR SINE MIR -3 259 221 3 1189 402 330 46 20 chr13 79261444 79261639 -41022673 - MIRb SINE MIR -9 259 60 3 1189 477 313 83 22 chr13 79262921 79263199 -41021113 - L1MEc LINE L1 -5544 856 562 3 1189 267 31 0 0 chr13 79263507 79263539 -41020773 + (TTG)n Simple_repeat Simple_repeat 2 33 0 3 1189 1033 126 11 0 chr13 79263620 79263795 -41020517 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 3 1189 22 35 0 0 chr13 79263957 79263986 -41020326 + AT_rich Low_complexity Low_complexity 1 29 0 3 1189 21 71 0 0 chr13 79264094 79264136 -41020176 + AT_rich Low_complexity Low_complexity 1 42 0 3 1189 243 0 0 0 chr13 79264285 79264312 -41020000 + (CCTA)n Simple_repeat Simple_repeat 4 30 0 3 1189 590 26 13 0 chr13 79264916 79264992 -41019320 + (TC)n Simple_repeat Simple_repeat 2 78 0 3 1189 29497 27 1 0 chr13 79265196 79268715 -41015597 + L1Md_T LINE L1 2316 5822 -297 3 1189 8000 54 1 0 chr13 79268715 79269709 -41014603 + L1Md_T LINE L1 5823 6817 -1 3 1189 991 128 5 120 chr13 79269819 79270024 -41014288 + L1Md_F3 LINE L1 6402 6584 0 3 1189 260 147 53 0 chr13 79270024 79270099 -41014213 + (TAA)n Simple_repeat Simple_repeat 1 79 0 3 1189 606 220 118 13 chr13 79270307 79270459 -41013853 - B3 SINE B2 -1 215 48 3 1189 1129 58 0 0 chr13 79271102 79271239 -41013073 + B1_Mus1 SINE Alu 2 138 -10 3 1189 264 59 0 0 chr13 79271239 79271273 -41013039 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1189 28 48 0 0 chr13 79272109 79272151 -41012161 + AT_rich Low_complexity Low_complexity 1 42 0 3 1189 28 0 0 0 chr13 79276752 79276780 -41007532 + AT_rich Low_complexity Low_complexity 1 28 0 3 1189 367 279 0 0 chr13 79277578 79277682 -41006630 - PB1 SINE Alu -19 108 5 3 1189 597 28 0 0 chr13 79279411 79279482 -41004830 + (TC)n Simple_repeat Simple_repeat 2 72 0 3 1189 308 269 21 31 chr13 79279512 79279608 -41004704 + MTEa LTR MaLR 278 372 -7 3 1189 21 0 0 0 chr13 79281896 79281917 -41002395 + AT_rich Low_complexity Low_complexity 1 21 0 3 1189 31 0 0 0 chr13 79283016 79283047 -41001265 + AT_rich Low_complexity Low_complexity 1 31 0 3 1189 683 270 24 36 chr13 79283355 79283520 -41000792 - RSINE1 SINE B4 0 165 3 3 1189 383 376 34 44 chr13 79283964 79284351 -40999961 + L1MD2 LINE L1 43 425 -6122 3 1189 21 0 0 0 chr13 79284434 79284455 -40999857 + AT_rich Low_complexity Low_complexity 1 21 0 3 1189 206 62 0 30 chr13 79284457 79284490 -40999822 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 3 1189 393 351 46 14 chr13 79284539 79284819 -40999493 + L1MD2 LINE L1 669 957 -5590 3 1189 1355 255 100 23 chr13 79285289 79285718 -40998594 - RMER15 LTR ERVL -53 522 61 3 1189 3396 188 53 4 chr13 79285771 79286451 -40997861 - Lx2 LINE L1 -1 6996 6284 3 1189 465 103 0 0 chr13 79286616 79286684 -40997628 + (TCC)n Simple_repeat Simple_repeat 3 70 0 3 1189 1167 169 21 8 chr13 79286686 79286925 -40997387 - Lx LINE L1 -2 6652 6411 3 1189 272 352 0 0 chr13 79287300 79287408 -40996904 - RLTR4_MM-int LTR ERV1 -1996 5610 5503 3 1189 998 334 84 67 chr13 79287687 79289623 -40994689 - RLTR4_MM-int LTR ERV1 -2424 5177 3266 3 1189 768 333 74 49 chr13 79289644 79290124 -40994188 - RLTR4_MM-int LTR ERV1 -4639 2962 2478 3 1189 4946 74 6 12 chr13 79290124 79290805 -40993507 - L1Md_F2 LINE L1 -12 6570 5894 3 1189 768 334 70 50 chr13 79290805 79291327 -40992985 - RLTR4_MM-int LTR ERV1 -5124 2477 1895 3 1189 429 351 59 26 chr13 79291508 79291896 -40992416 - RLTR4_MM-int LTR ERV1 -5791 1765 1226 3 1189 519 17 0 0 chr13 79291896 79291956 -40992356 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1189 429 346 64 27 chr13 79291956 79292114 -40992198 - RLTR4_MM-int LTR ERV1 -3838 1225 1059 3 1189 233 57 0 28 chr13 79293036 79293072 -40991240 + (CAA)n Simple_repeat Simple_repeat 2 36 0 3 1189 2097 131 8 166 chr13 79293130 79293635 -40990677 - RLTR23 LTR ERV1 0 430 6 3 1189 747 327 5 5 chr13 79293881 79294090 -40990222 - B3 SINE B2 -4 212 4 3 1189 884 182 38 11 chr13 79294582 79294765 -40989547 - L1_Mur1 LINE L1 -653 5233 5046 3 1189 261 0 0 0 chr13 79294819 79294848 -40989464 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1189 271 309 85 26 chr13 79294956 79295228 -40989084 - L1MC LINE L1 -1310 4836 4549 3 1189 29 60 0 0 chr13 79295535 79295585 -40988727 + AT_rich Low_complexity Low_complexity 1 50 0 3 1189 3406 81 0 4 chr13 79295663 79296124 -40988188 + L1Md_F2 LINE L1 6123 6581 -1 3 1189 237 65 0 0 chr13 79296220 79296251 -40988061 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1189 522 58 47 0 chr13 79296432 79296518 -40987794 + (CTCA)n Simple_repeat Simple_repeat 1 90 0 3 1189 431 241 14 14 chr13 79296535 79296674 -40987638 - Lx7 LINE L1 -149 7547 7409 3 1189 405 300 201 32 chr13 79296812 79297176 -40987136 - L1MC LINE L1 -2152 3994 3572 3 1189 340 295 71 39 chr13 79297190 79297317 -40986995 + B1F SINE Alu 12 142 -7 3 1189 198 71 0 0 chr13 79297341 79297369 -40986943 + (TAA)n Simple_repeat Simple_repeat 1 28 0 3 1189 715 324 76 19 chr13 79297867 79298235 -40986077 + Lx9 LINE L1 6805 7193 -451 3 1189 314 341 62 45 chr13 79298265 79298443 -40985869 + Lx9 LINE L1 7242 7422 -222 3 1190 22 0 0 0 chr13 79298632 79298654 -40985658 + AT_rich Low_complexity Low_complexity 1 22 0 3 1190 194 0 0 37 chr13 79298895 79298922 -40985390 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 3 1190 22 0 0 0 chr13 79299325 79299347 -40984965 + AT_rich Low_complexity Low_complexity 1 22 0 3 1190 612 151 0 0 chr13 79300340 79300486 -40983826 + CT-rich Low_complexity Low_complexity 1 146 0 3 1190 622 339 90 0 chr13 79301391 79301636 -40982676 + RMER1B Other Other 7 273 -793 3 1190 918 173 24 71 chr13 79301651 79301862 -40982450 - RMER17A LTR ERVK -10 799 599 3 1190 1763 85 11 23 chr13 79301845 79302109 -40982203 - RMER17A LTR ERVK -490 261 1 3 1190 2885 266 92 37 chr13 79302109 79303574 -40980738 + RMER1A Other Other 18 1030 0 3 1190 25 31 0 0 chr13 79303622 79303654 -40980658 + AT_rich Low_complexity Low_complexity 1 32 0 3 1190 264 304 11 21 chr13 79303686 79303725 -40980587 - MIRb SINE MIR -77 191 155 3 1190 546 16 0 0 chr13 79303725 79303788 -40980524 + (TCTA)n Simple_repeat Simple_repeat 2 64 0 3 1190 264 284 134 0 chr13 79303788 79303855 -40980457 - MIRb SINE MIR -114 154 78 3 1190 917 253 92 111 chr13 79304146 79304732 -40979580 + Lx7 LINE L1 7061 7635 -61 3 1190 2552 67 3 48 chr13 79304751 79305128 -40979184 + L1Md_F2 LINE L1 6220 6579 -3 3 1190 31 76 0 0 chr13 79305175 79305241 -40979071 + AT_rich Low_complexity Low_complexity 1 66 0 3 1190 9273 206 46 23 chr13 79305241 79308544 -40975768 - Lx6 LINE L1 -182 7278 3898 3 1190 850 305 110 14 chr13 79308546 79308902 -40975410 + MLT1D LTR MaLR 110 499 -6 3 1190 616 271 100 77 chr13 79309891 79310091 -40974221 + B3 SINE B2 1 214 -2 3 1190 2351 197 124 16 chr13 79310322 79310945 -40973367 - RMER6C LTR ERVK 0 690 1 3 1190 474 285 72 82 chr13 79313320 79313515 -40970797 + B3A SINE B2 5 197 -1 3 1190 531 233 108 0 chr13 79313831 79313951 -40970361 - B1_Mur3 SINE Alu -7 142 10 3 1190 253 335 77 44 chr13 79314847 79315028 -40969284 - MIRb SINE MIR -14 254 68 3 1190 27 0 0 0 chr13 79316195 79316222 -40968090 + AT_rich Low_complexity Low_complexity 1 27 0 3 1190 2670 103 8 8 chr13 79316277 79316667 -40967645 - L1_Mus3 LINE L1 -370 6268 5879 3 1190 2384 123 13 3 chr13 79316667 79317049 -40967263 + L1_Mus3 LINE L1 6244 6629 -9 3 1190 263 250 20 30 chr13 79318702 79318801 -40965511 + (TATG)n Simple_repeat Simple_repeat 1 98 0 3 1190 651 104 0 0 chr13 79318871 79318977 -40965335 + (TC)n Simple_repeat Simple_repeat 1 106 0 3 1190 2646 62 0 0 chr13 79320229 79320569 -40963743 + L1Md_T LINE L1 6243 6582 0 3 1190 870 59 8 0 chr13 79320821 79320940 -40963372 + B1_Mus2 SINE Alu 28 147 0 3 1190 3813 201 21 19 chr13 79323130 79323759 -40960553 + L1VL4 LINE L1 183 803 -5499 3 1190 369 0 0 0 chr13 79323759 79323800 -40960512 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1190 8559 103 78 9 chr13 79323800 79325299 -40959013 + L1VL4 LINE L1 804 2415 -1144 3 1190 27776 42 0 17 chr13 79325296 79329022 -40955290 - L1Md_F LINE L1 -1256 4627 968 4 1190 1564 190 10 0 chr13 79329034 79329339 -40954973 - L1Md_F LINE L1 -6208 408 101 4 1190 14789 169 30 18 chr13 79329337 79333048 -40951264 + Lx LINE L1 2897 6654 0 4 1190 4712 100 56 1 chr13 79334896 79335577 -40948735 - L1_Mus4 LINE L1 -6 6630 5913 4 1190 265 125 0 0 chr13 79335577 79335617 -40948695 + L1_Mus4 LINE L1 5887 5926 -712 4 1190 411 21 0 0 chr13 79335813 79335861 -40948451 + (ATG)n Simple_repeat Simple_repeat 2 49 0 4 1190 213 39 0 0 chr13 79336635 79336661 -40947651 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 4 1190 5244 142 19 16 chr13 79336678 79337565 -40946747 - Lx3A LINE L1 -7 6974 6085 4 1190 315 311 96 71 chr13 79337704 79337901 -40946411 - MLT1B LTR MaLR -11 379 178 4 1190 1975 158 3 0 chr13 79338056 79338378 -40945934 - ORR1A2 LTR MaLR 0 327 5 4 1190 644 185 166 104 chr13 79338658 79338869 -40945443 + URR1B DNA MER1_type 2 225 0 4 1190 24 0 0 0 chr13 79339232 79339256 -40945056 + AT_rich Low_complexity Low_complexity 1 24 0 4 1190 559 366 124 16 chr13 79340616 79340866 -40943446 - B4 SINE B4 -8 284 8 4 1190 23 33 0 0 chr13 79341681 79341711 -40942601 + AT_rich Low_complexity Low_complexity 1 30 0 4 1190 9177 125 10 4 chr13 79341737 79343228 -40941084 - MusHAL1 LINE L1 -448 2264 765 4 1190 868 102 0 0 chr13 79343228 79343356 -40940956 + L1_Mus2 LINE L1 6438 6565 -1 4 1190 588 256 169 0 chr13 79343471 79343643 -40940669 + B3 SINE B2 2 202 -14 4 1190 1093 229 147 19 chr13 79343643 79343955 -40940357 - ORR1B1 LTR MaLR -2 392 41 4 1190 215 122 73 0 chr13 79344518 79344559 -40939753 + GA-rich Low_complexity Low_complexity 2 45 0 4 1190 21 36 0 0 chr13 79345018 79345046 -40939266 + AT_rich Low_complexity Low_complexity 1 28 0 4 1190 1615 161 3 14 chr13 79345577 79345873 -40938439 + Lx3A LINE L1 6677 6969 -12 4 1190 261 83 0 0 chr13 79345874 79345910 -40938402 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 4 1190 21 36 0 0 chr13 79345925 79345953 -40938359 + AT_rich Low_complexity Low_complexity 1 28 0 4 1190 548 173 16 0 chr13 79346502 79346629 -40937683 - Lx9 LINE L1 -1 7643 7515 4 1190 225 0 0 0 chr13 79346629 79346654 -40937658 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 1190 369 0 0 0 chr13 79346654 79346694 -40937618 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1190 418 323 15 0 chr13 79346694 79346827 -40937485 - RSINE1 SINE B4 -29 136 2 4 1190 6240 149 47 8 chr13 79347603 79348979 -40935333 - Lx LINE L1 -2 6652 5234 4 1190 3134 89 12 90 chr13 79348971 79349181 -40935131 - L1VL2 LINE L1 -2176 1439 1235 4 1190 3293 41 5 0 chr13 79349181 79349575 -40934737 - MTA_Mm LTR MaLR 0 396 1 4 1190 4861 144 32 72 chr13 79349575 79350771 -40933541 - L1VL2 LINE L1 -2381 1234 60 4 1190 502 213 6 28 chr13 79351024 79351203 -40933109 + CT-rich Low_complexity Low_complexity 2 176 0 4 1190 783 201 0 7 chr13 79351203 79351343 -40932969 - B1_Mus1 SINE Alu -6 142 4 4 1190 34595 75 4 4 chr13 79351354 79357564 -40926748 - L1Md_F2 LINE L1 0 6582 374 4 1190 337 273 66 29 chr13 79359548 79359684 -40924628 - MIRc SINE MIR -2 266 126 4 1190 192 328 0 29 chr13 79360289 79360358 -40923954 - L2c LINE L2 -61 3326 3260 4 1190 260 278 235 10 chr13 79360369 79360467 -40923845 - L2a LINE L2 -8 3418 3299 4 1190 207 0 0 0 chr13 79360824 79360847 -40923465 + (CAGAGA)n Simple_repeat Simple_repeat 6 28 0 4 1190 23 33 0 0 chr13 79361082 79361112 -40923200 + AT_rich Low_complexity Low_complexity 1 30 0 4 1190 1557 212 138 2 chr13 79361119 79361684 -40922628 + Lx5 LINE L1 6259 6900 -150 4 1190 672 336 105 35 chr13 79362242 79362671 -40921641 - MER70A LTR ERVL -13 459 1 4 1190 712 248 40 15 chr13 79362741 79362942 -40921370 + Lx8 LINE L1 6654 6859 -614 4 1190 562 312 186 24 chr13 79363043 79363420 -40920892 + Lx8 LINE L1 7035 7472 -1 4 1190 513 240 43 46 chr13 79363682 79363957 -40920355 - RLTR15 LTR ERVK -68 291 45 4 1190 414 343 63 39 chr13 79364669 79365014 -40919298 + MLT1A LTR MaLR 18 387 -3 4 1190 281 271 186 0 chr13 79365222 79365338 -40918974 - Tigger7 DNA MER2_type 0 2491 2354 4 1190 739 298 24 34 chr13 79365338 79365633 -40918679 + RLTR40 LTR ERVK 1 292 -525 4 1190 1026 91 0 14 chr13 79365633 79365778 -40918534 + L1Md_F2 LINE L1 6419 6561 -21 4 1190 236 219 16 0 chr13 79365778 79365842 -40918470 + (TA)n Simple_repeat Simple_repeat 2 66 0 4 1190 669 324 11 28 chr13 79365985 79366166 -40918146 + B3 SINE B2 3 180 -36 4 1190 4679 50 3 0 chr13 79367512 79368078 -40916234 - L1_Mus1 LINE L1 -142 6425 5858 4 1190 8344 168 19 4 chr13 79368302 79369772 -40914540 - Lx4A LINE L1 -1 7057 5564 4 1190 255 0 64 43 chr13 79369772 79369819 -40914493 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 4 1190 5573 146 31 5 chr13 79369819 79370505 -40913807 - Lx4A LINE L1 -314 5563 4859 4 1190 7853 127 20 10 chr13 79370504 79371810 -40912502 + Lx4A LINE L1 3548 4866 -1011 4 1190 363 112 30 30 chr13 79372063 79372164 -40912148 + (TA)n Simple_repeat Simple_repeat 1 101 0 4 1190 207 298 105 24 chr13 79372171 79372295 -40912017 - MIR SINE MIR -22 240 107 4 1190 27 0 0 0 chr13 79372519 79372546 -40911766 + AT_rich Low_complexity Low_complexity 1 27 0 4 1190 11267 111 41 16 chr13 79372546 79375156 -40909156 - L1_Mus3 LINE L1 -7 6631 3965 4 1190 972 299 28 22 chr13 79375676 79376038 -40908274 + ORR1D2 LTR MaLR 5 368 -2 4 1190 209 370 36 36 chr13 79376415 79376611 -40907701 - MIR SINE MIR -12 250 55 4 1190 465 342 19 26 chr13 79376892 79377048 -40907264 + RSINE1 SINE B4 11 165 0 4 1190 1020 291 64 25 chr13 79377195 79377611 -40906701 - Lx9 LINE L1 -171 7473 6910 4 1190 1043 278 64 62 chr13 79377798 79378155 -40906157 + ORR1D2 LTR MaLR 11 368 -2 4 1190 2189 208 41 45 chr13 79378673 79379186 -40905126 + RLTR12B LTR ERVK 4 514 -14 4 1190 3982 97 12 0 chr13 79379200 79379759 -40904553 + L1_Mus4 LINE L1 6064 6629 -7 4 1190 1477 222 217 36 chr13 79380961 79381404 -40902908 - RMER1B Other Other -4 1062 540 4 1190 718 291 29 42 chr13 79381402 79381842 -40902470 + RMER1B Other Other 2 593 -473 4 1190 291 71 0 0 chr13 79381842 79381884 -40902428 + (TC)n Simple_repeat Simple_repeat 1 42 0 4 1190 1019 274 48 28 chr13 79381890 79382179 -40902133 - Lx5 LINE L1 -3 7047 6753 4 1190 1404 221 11 80 chr13 79382262 79382611 -40901701 - Lx5 LINE L1 -222 6828 6504 4 1190 447 19 0 0 chr13 79383478 79383530 -40900782 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 4 1190 471 248 30 67 chr13 79383550 79383684 -40900628 - ID_B1 SINE B4 -1 223 95 4 1190 226 294 43 97 chr13 79383558 79383765 -40900547 + YREP_Mm Unknown Unknown 186 381 -1431 4 1190 644 45 0 11 chr13 79385981 79386070 -40898242 + (GGA)n Simple_repeat Simple_repeat 3 90 0 4 1190 794 154 3 27 chr13 79387058 79387353 -40896959 + GA-rich Low_complexity Low_complexity 1 287 0 4 1190 1038 87 0 0 chr13 79387353 79387559 -40896753 + (GAA)n Simple_repeat Simple_repeat 1 206 0 4 1190 205 91 0 64 chr13 79387946 79387993 -40896319 + (CATA)n Simple_repeat Simple_repeat 3 46 0 4 1190 992 192 26 9 chr13 79387998 79388012 -40896300 - Lx9 LINE L1 -127 7517 7505 4 1190 261 0 0 0 chr13 79388012 79388041 -40896271 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1190 992 192 26 9 chr13 79388041 79388252 -40896060 - Lx9 LINE L1 -140 7504 7288 4 1190 2035 224 108 17 chr13 79388254 79388849 -40895463 + L1_Rod LINE L1 5096 5744 -103 4 1190 357 350 74 10 chr13 79388897 79389099 -40895213 - L2 LINE L2 -1984 1435 1221 4 1190 3232 69 2 2 chr13 79389895 79390315 -40893997 + L1_Mus1 LINE L1 6145 6564 -3 4 1190 24 0 0 0 chr13 79391104 79391128 -40893184 + AT_rich Low_complexity Low_complexity 1 24 0 4 1190 1053 185 93 13 chr13 79397081 79397306 -40887006 - Lx2B LINE L1 -257 6743 6501 4 1190 671 160 19 0 chr13 79397440 79397546 -40886766 - Lx4A LINE L1 -218 6840 6733 4 1190 957 221 18 62 chr13 79397535 79397810 -40886502 + Lx2B LINE L1 6736 6998 -2 4 1190 554 75 0 12 chr13 79398731 79398812 -40885500 + (TTCC)n Simple_repeat Simple_repeat 4 83 0 4 1190 444 183 0 0 chr13 79398845 79398938 -40885374 + T-rich Low_complexity Low_complexity 1 93 0 4 1190 704 206 43 0 chr13 79398938 79399079 -40885233 - B1_Mur2 SINE Alu 0 149 3 4 1190 23 54 0 0 chr13 79399231 79399268 -40885044 + AT_rich Low_complexity Low_complexity 1 37 0 4 1190 700 346 84 18 chr13 79399275 79399549 -40884763 + B4A SINE B4 1 292 0 4 1190 2071 57 0 15 chr13 79401011 79401280 -40883032 - L1_Mus1 LINE L1 0 6567 6303 4 1190 949 84 38 0 chr13 79401611 79401742 -40882570 + B1_Mm SINE Alu 2 137 -10 4 1190 40 37 0 0 chr13 79402132 79402186 -40882126 + AT_rich Low_complexity Low_complexity 1 54 0 4 1190 198 103 0 0 chr13 79402594 79402623 -40881689 + (GGAGAA)n Simple_repeat Simple_repeat 3 31 0 4 1190 732 184 0 0 chr13 79402862 79403014 -40881298 + CT-rich Low_complexity Low_complexity 1 152 0 4 1190 3166 28 2 47 chr13 79403055 79403463 -40880849 + RLTR10 LTR ERVK 1 390 0 4 1190 8111 37 13 8 chr13 79403463 79404456 -40879856 + RLTR10-int LTR ERVK 1 998 -989 4 1190 359 271 31 8 chr13 79404520 79404650 -40879662 + RLTR10-int LTR ERVK 1462 1594 -5987 4 1190 8853 17 0 1 chr13 79404732 79405728 -40878584 + RLTR10-int LTR ERVK 990 1984 -3 4 1190 3115 34 2 47 chr13 79405730 79406136 -40878176 + RLTR10 LTR ERVK 1 388 -2 4 1190 333 68 0 0 chr13 79406646 79406690 -40877622 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1190 1050 88 7 20 chr13 79407367 79407517 -40876795 + B1_Mus1 SINE Alu 1 148 0 4 1190 225 389 25 100 chr13 79407534 79407694 -40876618 + RSINE1 SINE B4 2 149 -16 4 1190 333 0 0 0 chr13 79407725 79407762 -40876550 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1190 276 30 0 0 chr13 79407762 79407794 -40876518 + (GA)n Simple_repeat Simple_repeat 2 34 0 4 1190 4283 44 0 2 chr13 79407945 79408468 -40875844 - L1Md_F3 LINE L1 -1 6583 6062 4 1190 1265 335 47 11 chr13 79409395 79409499 -40874813 - Lx8 LINE L1 -458 7015 6913 4 1190 429 20 0 0 chr13 79409499 79409549 -40874763 + (TC)n Simple_repeat Simple_repeat 2 51 0 5 1190 1265 335 47 11 chr13 79409549 79409993 -40874319 - Lx8 LINE L1 -561 6912 6447 4 1190 398 69 17 0 chr13 79410438 79410496 -40873816 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 5 1190 928 290 81 14 chr13 79410984 79411330 -40872982 - ORR1D2 LTR MaLR 0 370 2 5 1190 30 27 0 0 chr13 79412124 79412161 -40872151 + AT_rich Low_complexity Low_complexity 1 37 0 5 1190 329 308 35 82 chr13 79418345 79418515 -40865797 - B4A SINE B4 -90 202 41 5 1190 21 0 0 0 chr13 79419378 79419399 -40864913 + AT_rich Low_complexity Low_complexity 1 21 0 5 1190 696 107 0 0 chr13 79419729 79419850 -40864462 + (GA)n Simple_repeat Simple_repeat 2 122 0 5 1190 277 238 48 0 chr13 79420728 79420840 -40863472 + BC1_Mm scRNA scRNA 8 129 -23 5 1190 26 64 0 0 chr13 79421244 79421291 -40863021 + AT_rich Low_complexity Low_complexity 1 47 0 5 1190 431 226 27 60 chr13 79421915 79422099 -40862213 - Lx9 LINE L1 -1 7643 7466 5 1190 649 256 89 0 chr13 79422120 79422288 -40862024 - B3 SINE B2 -29 187 5 5 1190 186 43 0 0 chr13 79422768 79422791 -40861521 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1190 5255 116 31 2 chr13 79422805 79423603 -40860709 - Lx3A LINE L1 -12 6969 6149 5 1190 183 205 0 0 chr13 79423817 79423856 -40860456 + T-rich Low_complexity Low_complexity 1 39 0 5 1190 641 13 13 0 chr13 79424609 79424687 -40859625 + (GAAAA)n Simple_repeat Simple_repeat 2 80 0 5 1190 301 254 0 0 chr13 79426239 79426298 -40858014 - B1_Mur4 SINE Alu -57 93 35 5 1190 432 0 0 0 chr13 79426333 79426381 -40857931 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1190 405 0 0 0 chr13 79426381 79426425 -40857887 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1190 205 364 40 20 chr13 79426550 79426651 -40857661 - L2a LINE L2 -13 3413 3311 5 1190 517 318 0 31 chr13 79426852 79427011 -40857301 - Lx6 LINE L1 -74 7386 7233 5 1190 423 0 0 0 chr13 79427015 79427062 -40857250 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1190 7120 110 29 1 chr13 79427496 79428590 -40855722 + Lx LINE L1 5524 6654 0 5 1190 1579 188 3 79 chr13 79428878 79429008 -40855304 - RMER1B Other Other -11 1055 930 5 1190 1284 95 2 5 chr13 79429008 79429163 -40855149 + (GAAA)n Simple_repeat Simple_repeat 1 156 -300 5 1190 1284 95 2 5 chr13 79429171 79429466 -40854846 + (GAAA)n Simple_repeat Simple_repeat 157 456 0 5 148 1579 188 3 79 chr13 79429466 79429675 -40854637 - RMER1B Other Other -140 926 730 5 1191 2655 124 14 2 chr13 79430768 79431181 -40853131 - Lx LINE L1 0 6654 6237 5 1191 297 299 110 62 chr13 79431519 79431665 -40852647 - MIRb SINE MIR -28 240 88 5 1191 367 331 14 40 chr13 79432471 79432619 -40851693 + ID_B1 SINE B4 77 220 -4 5 1191 1220 54 0 0 chr13 79432844 79432992 -40851320 - B1_Mus1 SINE Alu 0 148 1 5 1191 321 26 0 0 chr13 79433195 79433233 -40851079 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1191 269 19 55 36 chr13 79433646 79433701 -40850611 + (TTTTA)n Simple_repeat Simple_repeat 5 60 0 5 1191 815 237 80 5 chr13 79433701 79433900 -40850412 - B3 SINE B2 0 216 3 5 1191 303 113 0 0 chr13 79433960 79434013 -40850299 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 5 1191 22 56 0 0 chr13 79435692 79435728 -40848584 + AT_rich Low_complexity Low_complexity 1 36 0 5 1191 1165 92 23 0 chr13 79437670 79437843 -40846469 + B2_Mm1t SINE B2 1 177 -16 5 1191 298 96 412 31 chr13 79437918 79438015 -40846297 + B2_Mm2 SINE B2 54 187 -8 5 1191 339 44 0 0 chr13 79438075 79438120 -40846192 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 5 1191 519 17 0 0 chr13 79438171 79438231 -40846081 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1191 1087 89 0 0 chr13 79438253 79438399 -40845913 - B1_Mus1 SINE Alu 0 148 3 5 1191 1238 70 0 39 chr13 79440521 79440700 -40843612 - L1_Mus2 LINE L1 0 6566 6395 5 1191 307 246 56 0 chr13 79440723 79440849 -40843463 + Lx9 LINE L1 7502 7634 -10 5 1191 235 363 8 16 chr13 79441963 79442089 -40842223 + L3 LINE CR1 3622 3746 -743 5 1191 439 242 81 29 chr13 79442947 79443083 -40841229 - Lx7 LINE L1 -723 6973 6831 5 1191 1349 322 70 26 chr13 79443449 79444052 -40840260 - Lx7 LINE L1 -898 6798 6170 5 1191 11368 117 7 5 chr13 79444054 79446824 -40837488 - Lx3A LINE L1 -4 6977 4204 5 1191 9102 127 24 53 chr13 79446821 79449389 -40834923 - Lx3A LINE L1 -3209 2677 199 5 1191 1230 131 16 0 chr13 79449662 79449845 -40834467 + B2_Mm2 SINE B2 2 187 -8 5 1191 199 392 38 6 chr13 79450736 79450895 -40833417 - L3 LINE CR1 -2198 2291 2128 5 1191 973 151 55 22 chr13 79451272 79451455 -40832857 - B2_Mm2 SINE B2 -5 190 2 5 1191 36 23 0 0 chr13 79451726 79451769 -40832543 + AT_rich Low_complexity Low_complexity 1 43 0 5 1191 841 256 78 3 chr13 79452725 79453034 -40831278 + L1_Mur3 LINE L1 5219 5550 -330 5 1191 615 245 121 11 chr13 79453067 79453257 -40831055 + B3 SINE B2 2 212 -4 5 1191 251 342 51 26 chr13 79453291 79453447 -40830865 + Lx9 LINE L1 7211 7370 -274 5 1191 1068 95 0 7 chr13 79453583 79453731 -40830581 + B1_Mus1 SINE Alu 1 147 -1 5 1191 855 29 0 0 chr13 79453799 79453901 -40830411 + (GAAA)n Simple_repeat Simple_repeat 3 104 0 5 1191 462 252 21 56 chr13 79453985 79454128 -40830184 + B1_Mur4 SINE Alu 13 150 0 5 1191 22 0 0 0 chr13 79454129 79454151 -40830161 + AT_rich Low_complexity Low_complexity 1 22 0 5 1191 432 0 0 0 chr13 79455090 79455138 -40829174 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 1191 432 0 0 0 chr13 79455138 79455185 -40829127 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1191 4443 135 42 37 chr13 79455227 79456011 -40828301 + Lx2A1 LINE L1 6210 6997 -11 5 1191 300 355 88 35 chr13 79457464 79457782 -40826530 + L1MB7 LINE L1 5801 6135 -49 5 1191 1557 32 5 0 chr13 79457782 79457967 -40826345 - B2_Mm1t SINE B2 -6 187 2 5 1191 1041 252 35 25 chr13 79457970 79458288 -40826024 - Lx9 LINE L1 -614 7030 6710 5 1191 198 0 0 0 chr13 79459332 79459354 -40824958 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1191 216 276 26 13 chr13 79459603 79459680 -40824632 - L2 LINE L2 -1032 2387 2310 5 1191 624 314 37 2 chr13 79460524 79460729 -40823583 + B3A SINE B2 2 214 -2 5 1191 23 0 0 0 chr13 79460730 79460753 -40823559 + AT_rich Low_complexity Low_complexity 1 23 0 5 1191 1028 57 0 114 chr13 79461363 79461521 -40822791 + B1_Mus2 SINE Alu 1 140 -7 5 1191 1001 287 107 10 chr13 79461793 79462092 -40822220 + ORR1D1 LTR MaLR 11 338 -36 5 1191 1524 237 40 3 chr13 79462115 79462441 -40821871 + ORR1D1-int LTR MaLR 1 338 -1032 5 1191 350 227 0 33 chr13 79462441 79462532 -40821780 + L1_Rod LINE L1 5504 5591 -256 5 1191 552 281 7 36 chr13 79463995 79464135 -40820177 + B1_Mur3 SINE Alu 7 142 -7 5 1191 660 318 40 52 chr13 79465542 79465794 -40818518 - MTD LTR MaLR -6 413 165 5 1191 1014 200 46 28 chr13 79465793 79466076 -40818236 - RLTR25A LTR ERVK -17 1086 799 5 1191 1068 15 0 0 chr13 79466092 79466225 -40818087 - L1Md_A LINE L1 0 6582 6450 5 1191 434 113 0 0 chr13 79466247 79466309 -40818003 - RLTR23 LTR ERV1 -368 62 1 5 1191 3128 229 115 9 chr13 79466316 79467100 -40817212 - Lx9 LINE L1 -349 7295 6429 5 1191 457 149 41 31 chr13 79467101 79467198 -40817114 - RLTR26 LTR ERVK -304 338 241 5 1191 313 218 46 0 chr13 79467192 79467279 -40817033 - RMER13B LTR ERVK -813 95 5 5 1191 516 294 62 89 chr13 79467336 79467560 -40816752 + ORR1D1-int LTR MaLR 530 747 -623 5 1191 215 274 0 0 chr13 79467563 79467625 -40816687 + CT-rich Low_complexity Low_complexity 1 62 0 5 1191 773 245 54 15 chr13 79467625 79467828 -40816484 + ORR1D1 LTR MaLR 174 384 0 5 1191 547 287 249 7 chr13 79469185 79469490 -40814822 + MTE2a LTR MaLR 1 379 0 5 1191 950 177 9 5 chr13 79469631 79469861 -40814451 + Lx LINE L1 5235 5464 -422 5 1191 22409 38 4 15 chr13 79469850 79473590 -40810722 + L1Md_T LINE L1 226 3918 -1965 5 1191 7230 40 2 0 chr13 79473590 79474466 -40809846 + L1Md_T LINE L1 5705 6582 0 5 1191 6434 119 11 0 chr13 79474466 79475516 -40808796 + Lx LINE L1 5451 6511 -143 5 1191 641 205 129 161 chr13 79476219 79476498 -40807814 - RMER1C Other Other -1 1341 1072 5 1191 467 233 181 0 chr13 79476499 79476615 -40807697 + B1_Mus2 SINE Alu 11 147 0 5 1191 369 43 0 0 chr13 79476618 79476665 -40807647 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1191 267 65 15 62 chr13 79476666 79476731 -40807581 + (CAAAAA)n Simple_repeat Simple_repeat 3 64 0 5 1191 249 139 0 0 chr13 79477260 79477303 -40807009 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1191 180 0 0 0 chr13 79478715 79478735 -40805577 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1191 780 11 0 0 chr13 79478735 79478823 -40805489 + (GA)n Simple_repeat Simple_repeat 1 89 0 5 1191 252 59 0 0 chr13 79479501 79479535 -40804777 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1191 183 239 0 0 chr13 79481443 79481489 -40802823 + A-rich Low_complexity Low_complexity 5 50 0 5 1191 402 21 0 0 chr13 79484148 79484195 -40800117 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1191 396 0 0 0 chr13 79485005 79485049 -40799263 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1191 369 0 0 0 chr13 79487096 79487137 -40797175 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 5 1191 29 60 0 0 chr13 79488042 79488092 -40796220 + AT_rich Low_complexity Low_complexity 1 50 0 5 1191 196 375 12 12 chr13 79488453 79488534 -40795778 + L2 LINE L2 1462 1542 -1877 5 1191 21 0 0 0 chr13 79489200 79489221 -40795091 + AT_rich Low_complexity Low_complexity 1 21 0 5 1191 22 56 0 0 chr13 79489260 79489296 -40795016 + AT_rich Low_complexity Low_complexity 1 36 0 5 1191 981 89 0 43 chr13 79489865 79490006 -40794306 + B1_Mus1 SINE Alu 2 136 -12 5 1191 201 26 25 50 chr13 79490008 79490048 -40794264 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1191 229 323 117 51 chr13 79490247 79490384 -40793928 + B1_Mus2 SINE Alu 1 146 -1 5 1191 189 0 0 0 chr13 79490538 79490559 -40793753 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 5 1191 367 344 15 53 chr13 79490729 79490861 -40793451 + B1F2 SINE Alu 6 132 -17 5 1191 26 0 0 0 chr13 79491201 79491227 -40793085 + AT_rich Low_complexity Low_complexity 1 26 0 6 1191 204 40 0 0 chr13 79491329 79491354 -40792958 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1191 387 0 0 0 chr13 79491569 79491612 -40792700 + (TAA)n Simple_repeat Simple_repeat 3 45 0 6 1191 282 164 0 0 chr13 79492190 79492245 -40792067 + (CCTG)n Simple_repeat Simple_repeat 1 55 0 6 1191 378 0 0 0 chr13 79492261 79492303 -40792009 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1191 500 275 114 39 chr13 79492353 79492607 -40791705 - B4A SINE B4 -18 274 2 6 1191 27 0 0 0 chr13 79492778 79492805 -40791507 + AT_rich Low_complexity Low_complexity 1 27 0 6 1191 678 334 158 21 chr13 79493338 79493668 -40790644 - MTD LTR MaLR -40 379 5 6 1191 5857 41 4 1 chr13 79493911 79494627 -40789685 - L1Md_F2 LINE L1 -2 6580 5863 6 1191 1092 262 43 58 chr13 79494644 79494666 -40789646 + Lx9 LINE L1 6425 6441 -1203 6 1191 5539 83 7 66 chr13 79494666 79495519 -40788793 - RLTR13B4 LTR ERVK 0 803 1 6 1191 1092 262 43 58 chr13 79495519 79495549 -40788763 + Lx9 LINE L1 6442 6470 -1174 6 1191 1307 246 24 30 chr13 79495549 79495918 -40788394 - ORR1B2 LTR MaLR 0 367 1 6 1191 1092 262 43 58 chr13 79495918 79496209 -40788103 + Lx9 LINE L1 6471 6764 -880 6 1191 2281 65 27 2 chr13 79496209 79496525 -40787787 + IAPLTR2b LTR ERVK 1 310 -17 6 1191 241 209 0 0 chr13 79496525 79496568 -40787744 + Lx9 LINE L1 6759 6801 -843 6 1191 1185 246 11 25 chr13 79496580 79496863 -40787449 + Lx7 LINE L1 6465 6743 -953 6 1191 771 309 73 43 chr13 79497040 79497435 -40786877 - RLTR17 LTR ERVK -170 522 116 6 1191 877 173 98 0 chr13 79497463 79497636 -40786676 + Lx7 LINE L1 6733 6922 -774 6 1191 608 227 14 14 chr13 79497637 79497780 -40786532 - RMER1C Other Other 0 1342 1200 6 1191 2451 241 81 40 chr13 79497812 79498568 -40785744 + Lx7 LINE L1 6910 7696 0 6 1191 2485 253 29 35 chr13 79498569 79499294 -40785018 + Lx9 LINE L1 6797 7517 -127 6 1191 452 219 12 36 chr13 79499272 79499438 -40784874 + Lx9 LINE L1 7460 7621 -23 6 1191 22 35 0 0 chr13 79499642 79499671 -40784641 + AT_rich Low_complexity Low_complexity 1 29 0 6 1191 255 309 195 20 chr13 79500277 79500302 -40784010 - MLT2B2 LTR ERVL -282 233 5 1 1191 691 279 6 29 chr13 79500302 79500472 -40783840 - MTEa LTR MaLR -209 170 5 2 1191 21 36 0 0 chr13 79505627 79505655 -40778657 + AT_rich Low_complexity Low_complexity 1 28 0 3 1191 593 27 0 13 chr13 79505682 79505758 -40778554 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 4 1191 1086 267 203 38 chr13 79505766 79506171 -40778141 - RMER15 LTR ERVL -14 561 90 5 1191 300 213 16 0 chr13 79506434 79506495 -40777817 - MTE2b LTR MaLR -294 85 24 6 1191 459 276 35 0 chr13 79506520 79506636 -40777676 - MTE2b-int LTR MaLR -2 1578 1459 6 1191 1868 240 47 19 chr13 79506959 79507563 -40776749 - Lx9 LINE L1 -1676 5968 5315 7 1191 279 79 0 0 chr13 79507583 79507621 -40776691 + (CTTA)n Simple_repeat Simple_repeat 2 39 0 8 1191 2666 118 12 58 chr13 79507621 79508100 -40776212 - Lx3_Mus LINE L1 -21 6988 6532 9 1191 3041 263 63 110 chr13 79508099 79509358 -40774954 - Lx9 LINE L1 -523 5324 4043 7 1191 3758 59 0 43 chr13 79509358 79509875 -40774437 - L1Md_F2 LINE L1 -2 6580 6086 1 1191 3041 263 63 110 chr13 79509875 79510898 -40773414 - Lx9 LINE L1 -1805 4042 3151 7 1191 392 367 118 6 chr13 79511033 79511203 -40773109 - ID_B1 SINE B4 -6 218 30 1 1191 32 26 0 0 chr13 79512447 79512486 -40771826 + AT_rich Low_complexity Low_complexity 1 39 0 1 1191 270 56 0 0 chr13 79512541 79512577 -40771735 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1191 214 344 51 51 chr13 79512692 79512790 -40771522 - B4A SINE B4 -162 130 33 1 1191 2231 154 314 2 chr13 79512951 79513509 -40770803 + L1_Mur2 LINE L1 3604 4335 -1542 1 1191 1064 166 10 0 chr13 79513502 79513695 -40770617 + L1_Mm LINE L1 4835 5029 -854 1 1191 2303 199 19 8 chr13 79513695 79514167 -40770145 + Lx LINE L1 6165 6641 -13 1 1191 22 35 0 0 chr13 79514179 79514208 -40770104 + AT_rich Low_complexity Low_complexity 1 29 0 1 1191 374 343 58 24 chr13 79514347 79514553 -40769759 + MIRb SINE MIR 54 266 -2 1 1191 29328 129 7 17 chr13 79514813 79516930 -40767382 + L1_Mus3 LINE L1 217 2299 -3584 2 1191 5134 132 73 11 chr13 79516930 79517780 -40766532 - RMER17A2 LTR ERVK -3 903 1 2 1191 29328 118 9 12 chr13 79517780 79522113 -40762199 + L1_Mus3 LINE L1 2300 6633 -5 2 1191 361 172 35 0 chr13 79522484 79522571 -40761741 + (TATG)n Simple_repeat Simple_repeat 2 91 0 2 1191 2677 195 46 49 chr13 79523079 79523768 -40760544 - RMER6C LTR ERVK 0 690 4 2 1191 7295 132 27 7 chr13 79523822 79525750 -40758562 + L1_Mus3 LINE L1 4668 6636 -2 2 1191 468 0 0 0 chr13 79525991 79526043 -40758269 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1191 209 164 36 0 chr13 79526044 79526099 -40758213 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1191 375 23 0 0 chr13 79528355 79528399 -40755913 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1191 234 198 12 24 chr13 79528399 79528482 -40755830 - Lx5 LINE L1 -4 7046 6965 2 1191 345 75 0 0 chr13 79528868 79528921 -40755391 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1191 342 0 0 0 chr13 79528921 79528958 -40755354 + (GA)n Simple_repeat Simple_repeat 2 39 0 3 1191 221 146 53 35 chr13 79529512 79529569 -40754743 + (AAATG)n Simple_repeat Simple_repeat 2 59 0 3 1191 326 302 0 0 chr13 79529897 79529983 -40754329 - PB1D10 SINE Alu -10 107 22 3 1191 456 67 0 0 chr13 79530673 79530733 -40753579 + (TTTA)n Simple_repeat Simple_repeat 4 63 0 3 1191 3653 95 11 4 chr13 79530985 79531514 -40752798 - Lx3_Mus LINE L1 0 7009 6477 3 1191 476 220 231 39 chr13 79531561 79531688 -40752624 - Lx9 LINE L1 -8 7636 7489 3 1191 294 95 0 0 chr13 79531688 79531730 -40752582 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1191 414 0 0 0 chr13 79531735 79531781 -40752531 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1191 476 220 231 39 chr13 79531781 79531902 -40752410 - Lx9 LINE L1 -178 7466 7334 3 1191 249 272 106 31 chr13 79532161 79532267 -40752045 - PB1 SINE Alu 0 127 14 3 1191 242 329 43 0 chr13 79532677 79532747 -40751565 + B1F1 SINE Alu 9 81 -68 3 1191 21 0 0 0 chr13 79533008 79533029 -40751283 + AT_rich Low_complexity Low_complexity 1 21 0 4 1191 26 50 0 0 chr13 79533041 79533081 -40751231 + AT_rich Low_complexity Low_complexity 1 40 0 4 1191 426 20 0 0 chr13 79533128 79533179 -40751133 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1191 532 294 137 64 chr13 79533276 79533714 -40750598 + AmnSINE1 SINE SINE 67 536 -39 4 1191 552 319 0 0 chr13 79535114 79535252 -40749060 - B3A SINE B2 -59 139 2 4 1191 335 301 113 27 chr13 79535323 79535545 -40748767 - L1M5 LINE L1 -431 5809 5569 4 1191 28 0 0 0 chr13 79535634 79535662 -40748650 + AT_rich Low_complexity Low_complexity 1 28 0 4 1191 345 311 85 24 chr13 79536408 79536619 -40747693 + Charlie1a DNA MER1_type 1038 1261 -194 4 1191 982 55 0 0 chr13 79536622 79536750 -40747562 + B1_Mus2 SINE Alu 20 147 0 4 1191 21 57 0 0 chr13 79536811 79536846 -40747466 + AT_rich Low_complexity Low_complexity 1 35 0 4 1191 300 143 0 0 chr13 79537032 79537102 -40747210 + (A)n Simple_repeat Simple_repeat 1 70 0 5 1191 249 108 0 0 chr13 79537184 79537221 -40747091 + (T)n Simple_repeat Simple_repeat 1 37 0 5 1191 1179 174 35 33 chr13 79537915 79538218 -40746094 + ORR1B2 LTR MaLR 1 366 -1 5 1191 433 290 10 10 chr13 79538329 79538430 -40745882 + RSINE1 SINE B4 31 131 -34 5 1191 21 36 0 0 chr13 79540136 79540164 -40744148 + AT_rich Low_complexity Low_complexity 1 28 0 5 1191 197 108 27 0 chr13 79540194 79540231 -40744081 + (TA)n Simple_repeat Simple_repeat 1 38 0 5 1191 349 266 121 0 chr13 79541388 79541512 -40742800 + B1_Mur1 SINE Alu 5 143 -6 5 1191 21 82 0 0 chr13 79541582 79541631 -40742681 + AT_rich Low_complexity Low_complexity 1 49 0 5 1191 609 40 0 0 chr13 79542000 79542076 -40742236 + (TG)n Simple_repeat Simple_repeat 2 77 0 5 1191 234 191 0 0 chr13 79542080 79542127 -40742185 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1191 441 0 0 0 chr13 79543229 79543278 -40741034 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1191 1000 303 71 28 chr13 79543305 79543740 -40740572 - Lx9 LINE L1 -232 7412 6959 6 1191 378 0 0 0 chr13 79543748 79543790 -40740522 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 6 1191 8092 128 25 27 chr13 79543790 79545143 -40739169 - Lx3A LINE L1 -14 6967 5617 6 1191 6645 89 26 4 chr13 79545141 79546130 -40738182 + L1_Mur1 LINE L1 4151 5161 -725 6 1191 467 267 17 0 chr13 79546131 79546251 -40738061 - Lx9 LINE L1 -251 7393 7272 6 1191 558 0 0 0 chr13 79546417 79546479 -40737833 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 1191 205 170 0 41 chr13 79546549 79546598 -40737714 + T-rich Low_complexity Low_complexity 1 47 0 6 1191 570 301 139 43 chr13 79546622 79547039 -40737273 - Lx9 LINE L1 -28 7616 7160 6 1191 216 0 0 0 chr13 79547192 79547216 -40737096 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1191 2118 192 101 105 chr13 79547650 79548343 -40735969 + RMER6C LTR ERVK 1 690 0 7 1191 231 244 0 0 chr13 79548390 79548431 -40735881 + ID SINE ID 34 74 -150 7 1191 1587 254 35 21 chr13 79548526 79548957 -40735355 - Lx9 LINE L1 -711 6933 6497 6 1191 764 263 6 0 chr13 79548969 79549140 -40735172 - L1_Rod LINE L1 -109 5738 5567 7 1191 262 198 94 47 chr13 79549141 79549226 -40735086 + Lx9 LINE L1 6929 7017 -627 7 1191 1656 117 38 4 chr13 79549226 79549491 -40734821 - Lx2 LINE L1 -11 6986 6713 7 1191 232 209 73 15 chr13 79549959 79550027 -40734285 - L1MA4A LINE L1 -170 6130 6059 7 1191 312 27 0 0 chr13 79550028 79550065 -40734247 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 7 1191 1055 68 8 0 chr13 79550067 79550200 -40734112 - B1_Mm SINE Alu -12 135 2 7 1191 356 239 80 112 chr13 79550222 79550400 -40733912 - L1MA4A LINE L1 -301 5999 5828 7 1191 909 270 75 38 chr13 79550400 79550711 -40733601 - ORR1E LTR MaLR -13 357 39 7 1191 258 296 71 0 chr13 79550959 79551057 -40733255 + ORSL-2b DNA Tip100 395 499 -9 7 1191 6598 128 37 12 chr13 79551242 79552364 -40731948 - Lx LINE L1 -1 6653 5508 8 1191 1013 96 0 0 chr13 79552360 79552496 -40731816 + Lx LINE L1 5367 5502 -381 8 1191 353 290 7 121 chr13 79552532 79552673 -40731639 + RMER20B LTR ERVK 1 125 -502 8 1191 436 288 86 93 chr13 79553051 79553342 -40730970 - L1MA4A LINE L1 -558 5742 5454 7 1191 427 364 14 0 chr13 79554704 79554844 -40729468 - RSINE1 SINE B4 -22 143 2 8 1191 262 254 0 0 chr13 79556927 79556982 -40727330 + CT-rich Low_complexity Low_complexity 3 57 0 8 1191 25 31 0 0 chr13 79557510 79557542 -40726770 + AT_rich Low_complexity Low_complexity 1 32 0 8 1191 3644 171 41 5 chr13 79557920 79558574 -40725738 + Lx4A LINE L1 6378 7055 -3 8 1191 297 0 0 0 chr13 79558585 79558618 -40725694 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1191 5184 75 1 10 chr13 79558713 79559410 -40724902 + L1Md_F2 LINE L1 4896 5586 -297 8 1191 7610 67 4 9 chr13 79559411 79560408 -40723904 + L1Md_F2 LINE L1 5588 6579 -3 8 1192 301 238 0 0 chr13 79560784 79560868 -40723444 + (TA)n Simple_repeat Simple_repeat 1 84 0 8 1192 35365 36 0 0 chr13 79561092 79566253 -40718059 + L1Md_T LINE L1 330 5589 -297 8 1192 8990 5 0 0 chr13 79566253 79567249 -40717063 + L1Md_T LINE L1 5590 6585 0 8 1192 21 0 0 0 chr13 79567799 79567820 -40716492 + AT_rich Low_complexity Low_complexity 1 21 0 9 1192 589 112 0 0 chr13 79568106 79568186 -40716126 - Lx3_Mus LINE L1 -644 6365 6286 9 1192 1157 65 6 35 chr13 79568195 79568369 -40715943 - L1Md_F2 LINE L1 -3 6579 6411 9 1192 3833 72 75 9 chr13 79568370 79568927 -40715385 + Lx3_Mus LINE L1 6406 6999 -10 9 1192 592 191 30 0 chr13 79570678 79570846 -40713466 + GA-rich Low_complexity Low_complexity 2 174 0 9 1192 28 0 0 0 chr13 79573139 79573167 -40711145 + AT_rich Low_complexity Low_complexity 1 28 0 9 1192 201 74 0 0 chr13 79573244 79573271 -40711041 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 9 1192 363 298 106 7 chr13 79573713 79573855 -40710457 - MLT1C LTR MaLR -54 413 258 9 1192 403 353 72 36 chr13 79574397 79574591 -40709721 - MLT1C LTR MaLR -227 240 40 9 1192 189 107 0 0 chr13 79574603 79574631 -40709681 + (A)n Simple_repeat Simple_repeat 1 28 0 9 1192 424 256 45 30 chr13 79575181 79575314 -40708998 + Lx5 LINE L1 6916 7050 0 9 1192 284 349 0 34 chr13 79575453 79575542 -40708770 + PB1D10 SINE Alu 17 102 -15 1 1192 238 241 111 43 chr13 79575691 79575808 -40708504 - Zaphod DNA Tip100 -1266 2765 2641 1 1192 2545 119 2 28 chr13 79575850 79576251 -40708061 + Lx LINE L1 6244 6639 -15 1 1192 1093 65 0 0 chr13 79576251 79576390 -40707922 + B1_Mm SINE Alu 2 140 -7 1 1192 2545 119 2 28 chr13 79576390 79576410 -40707902 + Lx LINE L1 6640 6654 0 1 1192 387 0 0 0 chr13 79576417 79576460 -40707852 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 1 1192 549 0 0 0 chr13 79576593 79576654 -40707658 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1192 351 0 0 0 chr13 79576993 79577032 -40707280 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1192 5600 101 1 10 chr13 79578632 79579441 -40704871 - L1_Mus2 LINE L1 0 5883 5082 1 1192 4551 86 16 36 chr13 79579442 79580129 -40704183 + L1_Mus2 LINE L1 5893 6565 -1 1 1192 843 183 0 0 chr13 79581450 79581625 -40702687 + (TA)n Simple_repeat Simple_repeat 1 175 0 1 1192 477 275 136 11 chr13 79582846 79583037 -40701275 + B3 SINE B2 2 216 0 1 1192 1025 111 87 12 chr13 79583445 79583618 -40700694 - B2_Mm2 SINE B2 -9 186 1 1 1192 41 36 0 0 chr13 79583749 79583804 -40700508 + AT_rich Low_complexity Low_complexity 1 55 0 1 1192 563 257 52 129 chr13 79584091 79584301 -40700011 + B3A SINE B2 2 199 -17 1 1192 23 78 0 0 chr13 79585656 79585707 -40698605 + AT_rich Low_complexity Low_complexity 1 51 0 1 1192 869 110 0 7 chr13 79585832 79585969 -40698343 + (GAAA)n Simple_repeat Simple_repeat 4 139 0 1 1192 25 31 0 0 chr13 79586006 79586038 -40698274 + AT_rich Low_complexity Low_complexity 1 32 0 1 1192 242 287 148 0 chr13 79586282 79586383 -40697929 - MTEb LTR MaLR -34 345 230 1 1192 360 305 161 15 chr13 79587048 79587178 -40697134 - RSINE1 SINE B4 -14 151 3 1 1192 318 304 11 21 chr13 79587667 79587761 -40696551 - ID_B1 SINE B4 -11 213 121 1 1192 810 320 12 73 chr13 79588236 79588580 -40695732 + MTE2b LTR MaLR 4 326 -53 1 1192 2786 214 23 58 chr13 79588580 79589338 -40694974 + Lx6 LINE L1 5524 6268 -1192 1 1192 2819 275 102 6 chr13 79589343 79590178 -40694134 + Lx6 LINE L1 6518 7432 -28 1 1192 287 265 96 0 chr13 79590227 79590310 -40694002 + MER45R DNA Tip100 88 178 -1403 1 1192 2601 200 41 65 chr13 79590587 79591277 -40693035 + Lx2A LINE L1 6322 6994 -14 1 1192 255 61 0 0 chr13 79591278 79591311 -40693001 + (TAA)n Simple_repeat Simple_repeat 3 35 0 1 1192 273 204 101 11 chr13 79591735 79591824 -40692488 - Lx9 LINE L1 -4 7640 7544 1 1192 512 318 107 10 chr13 79592594 79592791 -40691521 - B3 SINE B2 0 216 1 1 1192 222 194 0 0 chr13 79593273 79593345 -40690967 + A-rich Low_complexity Low_complexity 1 72 0 1 1192 211 260 20 0 chr13 79593583 79593633 -40690679 + B1_Mus2 SINE Alu 1 51 -96 1 1192 1830 246 72 13 chr13 79593638 79594194 -40690118 + Lx9 LINE L1 7054 7642 -2 1 1192 938 19 0 0 chr13 79594230 79594335 -40689977 + U6 snRNA snRNA 1 105 -2 1 1192 8545 45 1 0 chr13 79594337 79595575 -40688737 + L1Md_F2 LINE L1 4829 6067 -515 1 1192 243 125 0 0 chr13 79595575 79595615 -40688697 + (A)n Simple_repeat Simple_repeat 1 40 0 1 1192 3601 88 27 11 chr13 79595619 79596145 -40688167 - Lx3_Mus LINE L1 -285 6724 6191 1 1192 1759 127 29 11 chr13 79596140 79596418 -40687894 + Lx3A LINE L1 6693 6975 -6 1 1192 405 0 0 0 chr13 79597699 79597744 -40686568 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1192 27 49 0 0 chr13 79597744 79597785 -40686527 + AT_rich Low_complexity Low_complexity 1 41 0 1 1192 332 311 119 75 chr13 79599081 79599442 -40684870 - MLT1B LTR MaLR -13 377 1 1 1192 228 125 26 65 chr13 79599737 79599814 -40684498 + A-rich Low_complexity Low_complexity 2 75 0 1 1192 198 0 0 0 chr13 79599924 79599946 -40684366 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1192 678 279 5 5 chr13 79599979 79600195 -40684117 + Lx9 LINE L1 7296 7511 -133 1 1192 231 263 62 81 chr13 79600164 79600375 -40683937 + Lx9 LINE L1 7417 7623 -21 1 1192 246 95 0 0 chr13 79600430 79600472 -40683840 + (CAAAAA)n Simple_repeat Simple_repeat 4 45 0 1 1192 193 0 0 86 chr13 79600690 79600725 -40683587 + (CAAAAA)n Simple_repeat Simple_repeat 3 34 0 1 1192 835 239 78 19 chr13 79600742 79600998 -40683314 + RLTR20A LTR ERVK 47 317 -224 1 1192 1199 87 23 3 chr13 79601019 79601724 -40682588 + (TTTC)n Simple_repeat Simple_repeat 1 719 0 1 1192 414 134 52 0 chr13 79601724 79601784 -40682528 + polypyrimidine Low_complexity Low_complexity 41 102 0 1 1192 1088 128 6 0 chr13 79601784 79601963 -40682349 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1 1192 414 134 52 0 chr13 79601963 79601991 -40682321 + polypyrimidine Low_complexity Low_complexity 10 40 0 1 1192 1162 96 8 8 chr13 79601991 79602172 -40682140 + (TTTC)n Simple_repeat Simple_repeat 1 184 -182 1 1192 1162 96 8 8 chr13 79602179 79602357 -40681955 + (TTTC)n Simple_repeat Simple_repeat 185 366 0 1 1192 570 237 12 42 chr13 79602694 79602861 -40681451 - Lx3C LINE L1 -2 6974 6813 1 1192 13303 175 46 19 chr13 79602857 79605684 -40678628 - L1_Mur1 LINE L1 -712 5174 2274 1 1192 29355 88 25 25 chr13 79605684 79607418 -40676894 - L1Md_F3 LINE L1 0 6584 4824 1 1192 230 290 37 75 chr13 79607418 79607552 -40676760 + MER72B LTR ERV1 288 416 -352 1 1192 29355 88 25 25 chr13 79607552 79610299 -40674013 - L1Md_F3 LINE L1 0 4823 2032 1 1192 5428 93 9 0 chr13 79610299 79611058 -40673254 + L1_Mus1 LINE L1 5802 6567 0 1 1192 29355 130 21 23 chr13 79611058 79612365 -40671947 - L1Md_F3 LINE L1 -3852 2031 725 1 1192 324 268 175 12 chr13 79612375 79612541 -40671771 - L1Md_F3 LINE L1 -5815 801 609 1 1192 304 227 8 196 chr13 79612582 79612734 -40671578 - L1VL1 LINE L1 -6296 126 36 1 1192 12210 21 0 1 chr13 79612765 79614273 -40670039 - L1_Mm LINE L1 -849 5451 3922 1 1192 927 179 21 30 chr13 79614268 79614504 -40669808 - L1_Mur1 LINE L1 -3844 2042 1809 1 1192 228 122 0 0 chr13 79614844 79614885 -40669427 + (TTG)n Simple_repeat Simple_repeat 2 42 0 1 1192 2611 192 23 20 chr13 79614985 79615996 -40668316 - L1_Mur1 LINE L1 -2100 1814 802 1 1192 3707 95 26 4 chr13 79616665 79617206 -40667106 - L1Md_F2 LINE L1 0 6582 6030 1 1192 2870 65 5 0 chr13 79617206 79617591 -40666721 + L1Md_F2 LINE L1 5619 6005 -577 1 1192 362 179 95 0 chr13 79617729 79617813 -40666499 + L1_Mur2 LINE L1 21 112 -6600 1 1192 1072 190 95 0 chr13 79617808 79618040 -40666272 + Lx4A LINE L1 6499 6752 -306 1 1192 485 213 6 0 chr13 79618047 79618211 -40666101 + (TG)n Simple_repeat Simple_repeat 2 166 0 1 1192 2338 206 83 8 chr13 79618443 79619055 -40665257 - Lx9 LINE L1 -27 7617 6960 1 1192 2084 205 100 16 chr13 79619051 79619667 -40664645 - L1Md_F3 LINE L1 -650 5934 5277 1 1192 2542 208 12 35 chr13 79619732 79620420 -40663892 - L1_Rod LINE L1 -3560 2287 1616 1 1192 7751 43 6 0 chr13 79620421 79622111 -40662201 - L1Md_F2 LINE L1 0 6582 4883 1 1192 1055 197 23 36 chr13 79622111 79622417 -40661895 - L1_Rod LINE L1 -4221 1626 1325 1 1192 1585 291 54 0 chr13 79622415 79623010 -40661302 - L1_Rod LINE L1 -6441 731 105 1 1192 5372 57 6 6 chr13 79623865 79624551 -40659761 - L1Md_F2 LINE L1 0 6582 5897 1 1192 2004 120 7 0 chr13 79624569 79624878 -40659434 - Lx3_Mus LINE L1 -186 6823 6513 1 1192 1178 113 26 5 chr13 79624878 79625073 -40659239 + Lx3_Mus LINE L1 6811 7009 0 1 1192 21 0 0 0 chr13 79625099 79625120 -40659192 + AT_rich Low_complexity Low_complexity 1 21 0 1 1192 612 254 113 10 chr13 79625572 79625767 -40658545 - B3 SINE B2 -1 215 1 1 1192 200 100 25 0 chr13 79625773 79625813 -40658499 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1192 425 276 93 40 chr13 79625858 79625895 -40658417 - B3 SINE B2 -7 209 176 1 1192 231 114 0 0 chr13 79625895 79625930 -40658382 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1 1192 425 276 93 40 chr13 79625930 79626043 -40658269 - B3 SINE B2 -41 175 51 1 1192 409 217 0 52 chr13 79626208 79626305 -40658007 - PB1D9 SINE Alu -1 119 28 1 1192 2784 240 65 1 chr13 79626375 79627042 -40657270 - Lx6 LINE L1 -6 7454 6746 1 1192 7060 89 4 5 chr13 79627072 79628438 -40655874 - L1_Mus2 LINE L1 0 6566 5202 1 1192 678 223 7 21 chr13 79628448 79628590 -40655722 - B1_Mur4 SINE Alu -8 142 3 1 1192 806 266 9 0 chr13 79628615 79628833 -40655479 - Lx6 LINE L1 -723 6737 6518 1 1192 2696 39 25 45 chr13 79628895 79629248 -40655064 + ORR1A1 LTR MaLR 1 346 0 1 1192 703 226 286 28 chr13 79629281 79629564 -40654748 + RMER20B LTR ERVK 234 589 -38 1 1192 715 204 35 0 chr13 79629569 79629711 -40654601 - Lx6 LINE L1 -926 6534 6388 1 1192 285 218 0 60 chr13 79630023 79630106 -40654206 + RMER19C LTR ERVK 1 78 -533 1 1192 2547 213 59 45 chr13 79630106 79630938 -40653374 + RMER3D-int LTR ERVK 1998 2841 -1 1 1192 3096 86 2 0 chr13 79630939 79631359 -40652953 + BGLII LTR ERVK 1 421 0 1 1192 25 0 0 0 chr13 79631413 79631438 -40652874 + AT_rich Low_complexity Low_complexity 1 25 0 1 1192 321 47 0 0 chr13 79631495 79631538 -40652774 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1192 1010 224 167 25 chr13 79631569 79631971 -40652341 + Lx9 LINE L1 6604 7062 -582 1 1192 379 330 18 9 chr13 79631980 79632093 -40652219 - RSINE1 SINE B4 -42 123 10 1 1192 3280 74 55 0 chr13 79632211 79632646 -40651666 - L1_Mus1 LINE L1 -2 6565 6107 1 1192 3421 75 7 0 chr13 79632647 79633293 -40651019 + L1_Mus1 LINE L1 5413 6063 -504 1 1192 578 14 14 0 chr13 79634048 79634119 -40650193 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 1 1192 249 33 0 0 chr13 79634119 79634148 -40650164 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1192 47 33 0 0 chr13 79634332 79634393 -40649919 + AT_rich Low_complexity Low_complexity 1 61 0 1 1192 26 30 0 0 chr13 79634474 79634507 -40649805 + AT_rich Low_complexity Low_complexity 1 33 0 1 1192 1337 233 69 17 chr13 79634669 79635112 -40649200 + Lx3C LINE L1 6522 7000 0 1 1192 22 0 0 0 chr13 79635194 79635216 -40649096 + AT_rich Low_complexity Low_complexity 1 22 0 1 1192 1017 282 86 33 chr13 79635469 79635828 -40648484 - MTE2a LTR MaLR -1 378 1 1 1192 353 283 469 9 chr13 79635829 79636057 -40648255 + L1MA6 LINE L1 5624 5956 -335 1 1192 653 167 8 48 chr13 79637442 79637568 -40646744 + B1_Mur2 SINE Alu 9 129 -20 1 1192 256 231 36 164 chr13 79637454 79637594 -40646718 + MT2B LTR ERVL 185 306 -295 1 1192 649 270 105 4 chr13 79638783 79639021 -40645291 - Lx8 LINE L1 -437 7036 6775 1 1192 404 370 15 7 chr13 79639478 79639750 -40644562 + Lx9 LINE L1 7104 7377 -267 1 1192 352 245 117 28 chr13 79640423 79640637 -40643675 + Lx9 LINE L1 7392 7624 -20 1 1192 322 318 107 69 chr13 79640835 79641051 -40643261 - L1MEg LINE L1 -4605 1479 1256 1 1192 405 258 58 37 chr13 79641104 79641357 -40642955 + L1VL1 LINE L1 84 477 -5941 1 1192 280 336 9 0 chr13 79641396 79641512 -40642800 + L1_Mus1 LINE L1 675 791 -5825 2 1192 12452 135 103 11 chr13 79641540 79646246 -40638066 + L1_Mus1 LINE L1 744 6558 -9 2 1192 442 219 69 52 chr13 79646266 79646439 -40637873 - Lx9 LINE L1 -1 7643 7468 2 1192 532 246 8 0 chr13 79646436 79646570 -40637742 + Lx9 LINE L1 7209 7343 -301 2 1192 205 152 43 0 chr13 79646629 79646675 -40637637 + T-rich Low_complexity Low_complexity 3 50 0 2 1192 2097 200 35 61 chr13 79646874 79647332 -40636980 + RLTR41 LTR ERV1 1 446 0 2 1192 1342 294 43 31 chr13 79648253 79648972 -40635340 + MuRRS4-int LTR ERV1 1122 1850 -5706 2 1192 651 60 0 0 chr13 79648972 79649056 -40635256 + (GAAA)n Simple_repeat Simple_repeat 4 87 0 2 1192 1342 294 43 31 chr13 79649056 79649076 -40635236 + MuRRS4-int LTR ERV1 1851 1870 -5686 2 1192 332 343 55 46 chr13 79649279 79649606 -40634706 + MuRRS4-int LTR ERV1 2098 2427 -5129 2 1192 555 292 83 40 chr13 79649795 79650095 -40634217 + MuLV-int LTR ERV1 4130 4442 -3164 2 1192 1486 299 27 20 chr13 79650498 79651301 -40633011 + MuRRS4-int LTR ERV1 3547 4014 -1049 2 1192 942 313 8 11 chr13 79651589 79651970 -40632342 + RLTR6-int LTR ERV1 7328 7707 -71 2 1192 727 174 0 100 chr13 79652058 79652218 -40632094 + RLTR41 LTR ERV1 1 144 -302 2 1192 856 153 15 0 chr13 79652210 79652347 -40631965 + RLTR41 LTR ERV1 308 446 0 2 1192 606 195 55 0 chr13 79653391 79653519 -40630793 + B1_Mus1 SINE Alu 5 139 -9 2 1192 237 65 0 0 chr13 79653520 79653551 -40630761 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1192 21 36 0 0 chr13 79653814 79653842 -40630470 + AT_rich Low_complexity Low_complexity 1 28 0 2 1192 460 217 122 34 chr13 79654611 79654816 -40629496 - MER33 DNA MER1_type -82 242 20 2 1192 1023 184 65 71 chr13 79654962 79655086 -40629226 + RMER17C LTR ERVK 1 202 -208 2 1192 970 126 6 6 chr13 79655086 79655254 -40629058 + (TCTCC)n Simple_repeat Simple_repeat 2 169 0 2 1192 1023 200 40 16 chr13 79655254 79655452 -40628860 + RMER17C LTR ERVK 203 401 -9 2 1192 357 305 11 0 chr13 79655868 79655963 -40628349 + RSINE1 SINE B4 1 96 -69 2 1192 553 199 12 107 chr13 79656570 79656823 -40627489 + RLTR19-int LTR ERVK 3426 3654 -2483 2 1192 286 288 0 0 chr13 79657505 79657578 -40626734 + RMER17C-int LTR ERVK 395 467 -2771 2 1192 779 310 17 40 chr13 79657622 79657971 -40626341 + RodERV21-int LTR ERV1 736 1076 -3915 2 1192 5113 284 9 24 chr13 79658190 79659678 -40624634 + RodERV21-int LTR ERV1 1252 2718 -2273 2 1192 6481 58 3 18 chr13 79660302 79661196 -40623116 + L1Md_F2 LINE L1 4705 5585 -298 2 1192 8218 43 3 5 chr13 79661197 79662195 -40622117 + L1Md_F2 LINE L1 5587 6582 0 2 1192 258 232 0 0 chr13 79663658 79663714 -40620598 + RLTR6-int LTR ERV1 4980 5035 -2743 2 1192 2271 356 42 42 chr13 79664056 79666132 -40618180 + RodERV21-int LTR ERV1 2718 4793 -198 2 1192 236 317 76 61 chr13 79666185 79666316 -40617996 + RMER4B LTR ERVK 344 476 -109 2 1192 1087 83 0 27 chr13 79666598 79666746 -40617566 - B1_Mus1 SINE Alu -2 146 3 2 1192 351 60 0 0 chr13 79666894 79666944 -40617368 + (T)n Simple_repeat Simple_repeat 1 50 0 2 1192 482 175 70 50 chr13 79666998 79667124 -40617188 + RLTR19-int LTR ERVK 3867 3969 -2168 2 1192 373 288 19 58 chr13 79667498 79667653 -40616659 + RLTR19-int LTR ERVK 4229 4377 -1760 2 1192 470 269 61 116 chr13 79667697 79667772 -40616540 + RMER10A LTR ERVL 121 195 -247 2 1192 233 0 62 0 chr13 79667772 79667804 -40616508 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1192 470 269 61 116 chr13 79667804 79668056 -40616256 + RMER10A LTR ERVL 196 430 -12 2 1192 428 322 32 52 chr13 79668062 79668216 -40616096 - ORR1D2 LTR MaLR -219 151 1 2 1192 228 322 117 11 chr13 79668216 79668289 -40616023 - ORR1D2-int LTR MaLR -53 1527 1445 2 1192 1462 272 20 35 chr13 79668289 79668686 -40615626 - ORR1D2-int LTR MaLR -171 1199 809 2 1192 520 316 60 121 chr13 79668987 79669368 -40614944 - RLTR26 LTR ERVK -197 445 88 2 1192 816 63 0 38 chr13 79669391 79669522 -40614790 + (TTTTC)n Simple_repeat Simple_repeat 2 127 0 2 1192 7648 191 40 9 chr13 79669524 79671029 -40613283 - MERVK26-int LTR ERVK -17 6902 5351 2 1192 20229 196 51 11 chr13 79671029 79674978 -40609334 - MERVK26-int LTR ERVK -2163 4756 654 2 1192 897 100 0 0 chr13 79674978 79675108 -40609204 + (TTC)n Simple_repeat Simple_repeat 3 132 0 2 1192 20229 196 51 11 chr13 79675108 79675413 -40608899 - MERVK26-int LTR ERVK -6266 653 330 2 1192 376 157 0 98 chr13 79675419 79675511 -40608801 - MERVK26-int LTR ERVK -6782 137 55 2 1192 602 333 20 28 chr13 79675768 79676015 -40608297 - ORR1D2-int LTR MaLR -536 834 590 2 1192 15957 22 0 0 chr13 79676015 79677973 -40606339 - L1Md_T LINE L1 -476 5407 3450 2 1192 1232 39 0 0 chr13 79677973 79678127 -40606185 + L1Md_T LINE L1 5433 5586 -297 2 1192 8422 32 3 0 chr13 79678127 79679120 -40605192 + L1Md_T LINE L1 5587 6582 0 2 1192 2093 277 17 34 chr13 79679152 79679796 -40604516 - ORR1D2-int LTR MaLR -737 633 1 2 1192 630 248 163 67 chr13 79679796 79680019 -40604293 - ORR1D2 LTR MaLR -85 274 29 2 1192 241 105 0 26 chr13 79680019 79680051 -40604261 + MusHAL1 LINE L1 1551 1582 -1130 2 1192 927 0 0 0 chr13 79680051 79680154 -40604158 + (TCTCC)n Simple_repeat Simple_repeat 3 105 0 2 1192 237 328 50 16 chr13 79680179 79680300 -40604012 + RMER10A LTR ERVL 310 434 -8 2 1192 424 224 301 0 chr13 79680326 79680489 -40603823 + ORR1D2 LTR MaLR 159 370 0 2 1192 1230 287 43 90 chr13 79680495 79681051 -40603261 + ORR1E-int LTR MaLR 814 1343 -27 2 1192 622 312 20 31 chr13 79681051 79681246 -40603066 + ORR1E LTR MaLR 4 196 -163 2 1192 239 235 0 0 chr13 79681267 79681318 -40602994 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1192 584 239 126 18 chr13 79681318 79681493 -40602819 + ORR1E LTR MaLR 171 384 0 2 1192 3370 38 0 0 chr13 79682898 79683321 -40600991 - L1Md_F2 LINE L1 -487 6095 5673 2 1192 188 56 83 0 chr13 79683886 79683922 -40600390 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1192 325 368 21 42 chr13 79684276 79684418 -40599894 + ID_B1 SINE B4 85 223 -1 2 1192 582 273 49 54 chr13 79684491 79684696 -40599616 - B3 SINE B2 -3 213 10 2 1192 937 305 100 18 chr13 79684967 79685322 -40598990 + MTD LTR MaLR 1 419 0 2 1192 353 331 39 45 chr13 79685849 79686004 -40598308 - RSINE1 SINE B4 0 165 12 2 1192 314 363 61 9 chr13 79686646 79686760 -40597552 + ID_B1 SINE B4 82 201 -23 2 1192 263 336 63 79 chr13 79686658 79686784 -40597528 + B1F SINE Alu 13 136 -13 2 1192 1304 260 26 84 chr13 79686803 79686902 -40597410 - ORR1D2 LTR MaLR 0 370 276 2 1192 2465 51 0 6 chr13 79686902 79687215 -40597097 + L1Md_F2 LINE L1 6266 6576 -6 2 1192 1304 260 26 84 chr13 79687215 79687357 -40596955 - ORR1D2 LTR MaLR -95 275 152 2 1192 2037 201 57 20 chr13 79687357 79687763 -40596549 - MTC LTR MaLR 0 421 1 2 1192 1304 260 26 84 chr13 79687763 79687911 -40596401 - ORR1D2 LTR MaLR -219 151 3 2 1192 273 277 11 78 chr13 79688385 79688475 -40595837 + RSINE1 SINE B4 6 89 -76 2 1192 228 273 114 0 chr13 79689035 79689123 -40595189 - ORR1E LTR MaLR -238 121 24 2 1192 22 35 0 0 chr13 79689732 79689761 -40594551 + AT_rich Low_complexity Low_complexity 1 29 0 2 1192 23 33 0 0 chr13 79691014 79691044 -40593268 + AT_rich Low_complexity Low_complexity 1 30 0 2 1192 1911 229 158 107 chr13 79691440 79691757 -40592555 + RMER19B LTR ERVK 4 289 -613 2 18 3588 97 42 9 chr13 79691757 79692301 -40592011 + L1_Mus4 LINE L1 6075 6636 0 2 1193 1911 229 158 107 chr13 79692301 79692343 -40591969 + RMER19B LTR ERVK 290 325 -577 2 1193 1037 141 0 6 chr13 79692343 79692522 -40591790 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 2 1193 1911 229 158 107 chr13 79692522 79693005 -40591307 + RMER19B LTR ERVK 326 890 -12 2 1193 1182 68 0 0 chr13 79693012 79693159 -40591153 + B1_Mm SINE Alu 1 147 0 2 1193 216 0 0 0 chr13 79693159 79693183 -40591129 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1193 315 0 0 0 chr13 79693669 79693704 -40590608 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1193 1115 73 0 0 chr13 79693704 79693841 -40590471 - B1_Mm SINE Alu -9 138 2 2 1193 22 0 0 0 chr13 79694728 79694750 -40589562 + AT_rich Low_complexity Low_complexity 1 22 0 2 1193 328 323 11 0 chr13 79694866 79694959 -40589353 + RSINE1 SINE B4 15 108 -57 2 1193 411 21 0 0 chr13 79694962 79695010 -40589302 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1193 365 284 135 52 chr13 79695400 79695427 -40588885 - CYRA11_Mm Unknown Y-chromosome -196 421 173 2 1193 852 217 98 0 chr13 79695427 79695630 -40588682 + URR1B DNA MER1_type 1 223 -2 2 1193 2805 208 44 3 chr13 79696051 79696639 -40587673 + Lx4B LINE L1 6365 6976 -82 2 1193 234 116 0 0 chr13 79696666 79696709 -40587603 + (TAAA)n Simple_repeat Simple_repeat 4 46 0 2 1193 21 57 0 0 chr13 79697212 79697247 -40587065 + AT_rich Low_complexity Low_complexity 1 35 0 2 1193 4339 149 20 3 chr13 79697465 79698177 -40586135 - Lx LINE L1 -9 6645 5922 2 1193 10467 91 40 15 chr13 79698177 79698304 -40586008 - L1VL4 LINE L1 -885 2674 2545 2 1193 3328 55 84 2 chr13 79698304 79698743 -40585569 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1193 10467 121 37 21 chr13 79698743 79701065 -40583247 - L1VL4 LINE L1 -1015 2544 193 2 1193 22 0 0 0 chr13 79702281 79702303 -40582009 + AT_rich Low_complexity Low_complexity 1 22 0 2 1193 2040 114 12 15 chr13 79702775 79703113 -40581199 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1193 52599 29 9 2 chr13 79703113 79709538 -40574774 + IAPEz-int LTR ERVK 8 6478 -3 2 1193 2040 114 12 15 chr13 79709542 79709880 -40574432 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1193 1553 221 82 0 chr13 79710702 79711018 -40573294 + MTC LTR MaLR 1 342 -79 2 1193 547 300 20 5 chr13 79711235 79711336 -40572976 - Lx3C LINE L1 -2 6974 6872 2 1193 204 40 0 0 chr13 79711336 79711361 -40572951 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 2 1193 547 300 20 5 chr13 79711361 79711460 -40572852 - Lx3C LINE L1 -105 6871 6772 2 1193 405 0 0 0 chr13 79711565 79711610 -40572702 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2 1193 23 33 0 0 chr13 79713121 79713151 -40571161 + AT_rich Low_complexity Low_complexity 1 30 0 2 1193 186 43 0 0 chr13 79713291 79713314 -40570998 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2 1193 27 73 0 0 chr13 79714489 79714544 -40569768 + AT_rich Low_complexity Low_complexity 1 55 0 2 1193 387 89 0 0 chr13 79715221 79715277 -40569035 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1193 328 287 30 0 chr13 79715327 79715428 -40568884 + L1M2 LINE L1 4584 4687 -1456 2 1193 689 230 68 9 chr13 79715443 79715662 -40568650 + L1_Rod LINE L1 5089 5320 -527 2 1193 335 306 0 9 chr13 79715995 79716107 -40568205 + Lx9 LINE L1 6710 6820 -824 2 1193 180 0 0 0 chr13 79716715 79716735 -40567577 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 1193 318 256 24 0 chr13 79716839 79716921 -40567391 + B4A SINE B4 1 84 -208 2 1193 212 152 0 42 chr13 79716930 79716978 -40567334 + GA-rich Low_complexity Low_complexity 2 47 0 2 1193 226 333 16 98 chr13 79716985 79717108 -40567204 + B1F SINE Alu 1 113 -36 2 1193 1002 305 42 54 chr13 79717690 79718303 -40566009 - RodERV21-int LTR ERV1 -105 4886 4281 2 1193 26044 66 3 3 chr13 79719076 79725031 -40559281 - L1Md_F3 LINE L1 -1 6583 631 2 1193 442 325 35 52 chr13 79725543 79725949 -40558363 - RodERV21-int LTR ERV1 -3107 3984 3586 2 1193 3078 287 93 21 chr13 79726175 79727466 -40556846 - RodERV21-int LTR ERV1 -2371 2620 1237 2 1193 779 282 72 46 chr13 79727694 79727999 -40556313 - RodERV21-int LTR ERV1 -3943 1048 736 2 1193 1551 232 102 66 chr13 79729204 79729636 -40554676 + MT2A LTR ERVL 18 464 -69 2 1193 816 11 0 0 chr13 79729636 79729729 -40554583 + (TC)n Simple_repeat Simple_repeat 2 94 0 2 1193 1551 232 102 66 chr13 79729729 79729794 -40554518 + MT2A LTR ERVL 465 532 -1 2 1193 1068 102 0 20 chr13 79730810 79730960 -40553352 + B1_Mus1 SINE Alu 2 148 0 2 1193 369 0 0 0 chr13 79730974 79731015 -40553297 + (TAA)n Simple_repeat Simple_repeat 3 43 0 2 1193 208 143 35 18 chr13 79734522 79734579 -40549733 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 1193 243 281 130 9 chr13 79734943 79735058 -40549254 - L1_Mur3 LINE L1 -1359 4521 4393 2 1193 2707 213 42 36 chr13 79735128 79735771 -40548541 - Lx4B LINE L1 -17 7041 6395 2 1193 8724 205 116 13 chr13 79735764 79738731 -40545581 - L1_Mur2 LINE L1 -552 5328 1532 2 1193 25 0 0 0 chr13 79738735 79738760 -40545552 + AT_rich Low_complexity Low_complexity 1 25 0 2 1193 2662 66 26 0 chr13 79738772 79739120 -40545192 - L1_Mus1 LINE L1 0 6567 6211 2 1193 27 0 0 0 chr13 79739123 79739150 -40545162 + AT_rich Low_complexity Low_complexity 1 27 0 3 1193 7992 177 15 4 chr13 79739150 79740724 -40543588 + Lx2 LINE L1 2357 3948 -1938 3 1193 4503 146 9 19 chr13 79740715 79740826 -40543486 - L1_Mm LINE L1 -1181 4702 4606 3 1193 4212 118 26 56 chr13 79740826 79741600 -40542712 - RMER17A LTR ERVK 0 751 1 3 1193 4503 146 9 19 chr13 79741600 79742293 -40542019 - L1_Mm LINE L1 -1278 4605 3906 3 1193 5735 126 25 18 chr13 79742295 79743217 -40541095 + L1_Mus4 LINE L1 5702 6629 -7 3 1193 2061 162 49 0 chr13 79743214 79743603 -40540709 + Lx2 LINE L1 3916 4323 -1554 3 1193 605 282 15 0 chr13 79743989 79744120 -40540192 - ETnERV2-int LTR ERVK -204 7202 7070 3 1193 8302 167 18 1 chr13 79744125 79746742 -40537570 + Lx2 LINE L1 4327 6995 -2 3 1193 22 35 0 0 chr13 79747116 79747145 -40537167 + AT_rich Low_complexity Low_complexity 1 29 0 3 1193 324 123 27 14 chr13 79747223 79747297 -40537015 + (TA)n Simple_repeat Simple_repeat 2 76 0 3 1193 302 80 20 0 chr13 79748318 79748368 -40535944 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 3 1193 22 35 0 0 chr13 79748490 79748519 -40535793 + AT_rich Low_complexity Low_complexity 1 29 0 3 1193 567 296 68 43 chr13 79748906 79749185 -40535127 + Charlie1a DNA MER1_type 278 563 -892 3 1193 312 314 33 106 chr13 79750917 79751313 -40532999 - L1MA7 LINE L1 -409 5882 5516 3 1193 773 71 119 0 chr13 79751313 79751439 -40532873 + L1_Mus3 LINE L1 6495 6635 -3 3 1193 183 162 0 0 chr13 79751526 79751563 -40532749 + T-rich Low_complexity Low_complexity 1 37 0 3 1193 279 251 63 38 chr13 79751564 79751709 -40532603 - L1MA7 LINE L1 -804 5496 5329 3 1193 2803 175 26 4 chr13 79751721 79752249 -40532063 - Lx5 LINE L1 -912 6138 5599 3 1193 3093 235 69 44 chr13 79752253 79753138 -40531174 + Lx5 LINE L1 6144 7050 0 3 1193 7731 63 15 1 chr13 79753193 79754661 -40529651 - L1Md_F2 LINE L1 0 6582 5093 3 1193 2785 176 4 8 chr13 79754934 79755451 -40528861 - Lx LINE L1 -3 6651 6137 3 1193 761 176 23 0 chr13 79755919 79756095 -40528217 + CT-rich Low_complexity Low_complexity 1 180 0 3 1193 1378 320 28 3 chr13 79756100 79756488 -40527824 + MTD LTR MaLR 20 417 -2 3 1193 24 53 0 0 chr13 79756677 79756715 -40527597 + AT_rich Low_complexity Low_complexity 1 38 0 3 1193 34 55 0 0 chr13 79757065 79757120 -40527192 + AT_rich Low_complexity Low_complexity 1 55 0 3 1193 495 180 29 18 chr13 79757999 79758169 -40526143 + Lx9 LINE L1 7472 7643 -1 3 1193 25 75 0 0 chr13 79758183 79758236 -40526076 + AT_rich Low_complexity Low_complexity 1 53 0 3 1193 21 36 0 0 chr13 79758401 79758429 -40525883 + AT_rich Low_complexity Low_complexity 1 28 0 3 1193 279 0 0 0 chr13 79758938 79758969 -40525343 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1193 676 241 25 0 chr13 79759152 79759310 -40525002 + Lx9 LINE L1 6727 6888 -756 3 1193 2384 93 26 3 chr13 79759400 79759744 -40524568 + L1_Mus4 LINE L1 6285 6636 0 3 1193 365 55 36 0 chr13 79759753 79759808 -40524504 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 3 1193 1699 233 57 14 chr13 79759810 79760249 -40524063 - RLTR20A2 LTR ERVK -120 458 1 3 1193 488 248 0 0 chr13 79760249 79760366 -40523946 + Lx9 LINE L1 6883 6999 -645 3 1193 9505 194 87 38 chr13 79760367 79761878 -40522434 + L1_Mur2 LINE L1 400 2053 -3824 3 1193 243 125 0 0 chr13 79761878 79761918 -40522394 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1193 9505 218 98 67 chr13 79761918 79764460 -40519852 + L1_Mur2 LINE L1 2054 4632 -1245 3 1193 234 0 0 0 chr13 79764460 79764486 -40519826 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 1193 9505 218 98 67 chr13 79764486 79764656 -40519656 + L1_Mur2 LINE L1 4633 4792 -1085 3 1193 288 0 0 0 chr13 79764656 79764688 -40519624 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1193 9505 218 98 67 chr13 79764688 79765283 -40519029 + L1_Mur2 LINE L1 4793 5400 -477 3 1193 2628 180 27 47 chr13 79765280 79765329 -40518983 + Lx4A LINE L1 6303 6345 -713 3 1193 4453 92 23 9 chr13 79765329 79765974 -40518338 - L1_Mus4 LINE L1 -1 6635 5982 3 1193 2628 180 27 47 chr13 79765974 79766271 -40518041 + Lx4A LINE L1 6346 6644 -414 3 1193 2366 134 0 11 chr13 79766271 79766640 -40517672 + RLTR8 LTR ERVK 1 365 0 3 1193 2628 180 27 47 chr13 79766640 79766804 -40517508 + Lx4A LINE L1 6645 6804 -254 3 1193 2616 198 25 46 chr13 79766804 79767366 -40516946 - RLTR20B3 LTR ERVK -27 550 1 3 1193 890 216 39 17 chr13 79767366 79767597 -40516715 + Lx4A LINE L1 6821 7056 -2 3 1193 1943 228 116 17 chr13 79767700 79768285 -40516027 + Lx9 LINE L1 6989 7631 -13 3 1193 219 125 0 0 chr13 79768307 79768347 -40515965 + (CAAAA)n Simple_repeat Simple_repeat 5 44 0 3 1193 293 117 0 16 chr13 79768412 79768473 -40515839 + (TC)n Simple_repeat Simple_repeat 1 60 0 3 1193 450 0 0 0 chr13 79768473 79768523 -40515789 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1193 23 0 0 0 chr13 79769093 79769116 -40515196 + AT_rich Low_complexity Low_complexity 1 23 0 3 1193 208 246 16 32 chr13 79769197 79769260 -40515052 + (CATATA)n Simple_repeat Simple_repeat 6 67 0 3 1193 330 121 0 0 chr13 79769271 79769337 -40514975 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1193 361 276 23 23 chr13 79769410 79769540 -40514772 + CT-rich Low_complexity Low_complexity 3 132 0 3 1193 985 189 86 26 chr13 79770594 79770827 -40513485 + RLTR13D2 LTR ERVK 1 247 -559 3 1193 2645 158 29 40 chr13 79770807 79771329 -40512983 + RLTR13D2 LTR ERVK 508 1023 0 3 1193 189 163 0 0 chr13 79771428 79771477 -40512835 + CT-rich Low_complexity Low_complexity 2 50 0 3 1193 490 118 11 11 chr13 79771533 79771627 -40512685 + (TA)n Simple_repeat Simple_repeat 2 95 0 3 1193 1846 234 57 73 chr13 79771923 79772429 -40511883 - RLTR18B LTR ERVK -8 504 7 3 1193 692 320 4 0 chr13 79772444 79772688 -40511624 + L1M2 LINE L1 5412 5656 -644 3 1193 3673 83 0 16 chr13 79772796 79772826 -40511486 + L1_Mus1 LINE L1 5973 5996 -571 3 1193 491 91 0 0 chr13 79772826 79772903 -40511409 - L1_Mus1 LINE L1 0 6567 6491 3 1193 3673 83 0 16 chr13 79772903 79773372 -40510940 + L1_Mus1 LINE L1 5997 6464 -103 3 1193 330 256 183 6 chr13 79773362 79773569 -40510743 + Lx8 LINE L1 5618 5864 -1832 3 1193 338 260 10 20 chr13 79773879 79773981 -40510331 - Lx9 LINE L1 -311 7333 7233 3 1193 333 210 8 86 chr13 79773978 79774217 -40510095 + Lx9 LINE L1 7367 7641 -3 3 1193 652 278 47 66 chr13 79774233 79774491 -40509821 + Lx8 LINE L1 6207 6459 -1014 3 1193 272 49 49 0 chr13 79774493 79774534 -40509778 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 3 1193 684 81 8 47 chr13 79774536 79774665 -40509647 - L1Md_F3 LINE L1 0 6584 6461 3 1193 1502 137 21 4 chr13 79774665 79774899 -40509413 - L1VL1 LINE L1 -6184 238 1 3 1193 398 88 15 0 chr13 79774908 79774976 -40509336 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 3 1193 1265 20 0 0 chr13 79774983 79775130 -40509182 - B1_Mus2 SINE Alu 0 147 1 3 1193 1005 312 21 19 chr13 79775237 79775609 -40508703 + Lx8 LINE L1 6547 6919 -554 3 1193 404 51 0 17 chr13 79775637 79775697 -40508615 + (TAA)n Simple_repeat Simple_repeat 3 61 0 3 1193 925 315 81 41 chr13 79775742 79776881 -40507431 - L1MA5 LINE L1 -417 5883 4638 3 1193 264 154 0 0 chr13 79776919 79776971 -40507341 + CT-rich Low_complexity Low_complexity 3 54 0 3 1193 1200 98 0 0 chr13 79776971 79777144 -40507168 + (TTTC)n Simple_repeat Simple_repeat 4 176 0 3 1193 1440 247 70 24 chr13 79777284 79777657 -40506655 - MTD LTR MaLR -12 407 18 3 1193 267 161 0 0 chr13 79777657 79777713 -40506599 + (ATG)n Simple_repeat Simple_repeat 2 57 0 3 1193 228 100 0 0 chr13 79777895 79777935 -40506377 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1193 238 237 0 17 chr13 79777999 79778059 -40506253 - L1MA5 LINE L1 -1609 4271 4213 3 1193 1181 252 68 101 chr13 79778061 79778489 -40505823 - MTD LTR MaLR -1 418 5 3 1193 529 270 123 19 chr13 79778709 79779049 -40505263 - L1MA5 LINE L1 -2328 3815 3448 3 1193 491 352 11 11 chr13 79779140 79779339 -40504973 - B3A SINE B2 -21 195 1 3 1193 492 313 68 25 chr13 79779348 79779672 -40504640 - L1MA5 LINE L1 -2701 3442 3105 3 1193 254 298 0 12 chr13 79780472 79780557 -40503755 - MLT1E1A LTR MaLR -2 678 595 3 1193 712 280 144 66 chr13 79780729 79781062 -40503250 - ORR1E LTR MaLR 0 359 1 3 1193 1637 338 97 4 chr13 79781062 79781755 -40502557 - ORR1E-int LTR MaLR -53 1527 768 3 1193 2805 206 5 1 chr13 79781863 79782493 -40501819 + L1_Mur1 LINE L1 741 1373 -2539 3 1193 236 204 19 0 chr13 79782485 79782539 -40501773 + MusHAL1 LINE L1 183 237 -3117 3 1193 18887 147 44 13 chr13 79782539 79783396 -40500916 + L1VL4 LINE L1 565 1445 -4441 3 1193 6804 88 52 14 chr13 79783396 79784382 -40499930 - RLTR13D5 LTR ERVK 0 1023 1 3 1193 18887 185 37 8 chr13 79784382 79784528 -40499784 + L1VL4 LINE L1 1446 1585 -4301 3 1193 261 0 0 0 chr13 79784528 79784557 -40499755 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1193 18887 185 37 8 chr13 79784557 79788108 -40496204 + L1VL4 LINE L1 1586 5255 -631 3 1193 1334 236 98 53 chr13 79788231 79788820 -40495492 - MYSERV16_I-int LTR ERVK -6 2320 1705 3 1193 4553 189 15 203 chr13 79788820 79789285 -40495027 + L1_Mur2 LINE L1 4144 4523 -1354 3 1193 1632 127 91 7 chr13 79789285 79789571 -40494741 - RLTR9E LTR ERVK 0 409 100 3 1193 4553 189 15 203 chr13 79789571 79790472 -40493840 + L1_Mur2 LINE L1 4524 5262 -615 3 1193 450 0 0 0 chr13 79790472 79790522 -40493790 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1193 4553 174 23 180 chr13 79790522 79791087 -40493225 + L1_Mur2 LINE L1 5263 5848 -29 3 1193 429 232 55 55 chr13 79791346 79791510 -40492802 + RNLTR23 LTR ERVK 479 642 0 3 1193 250 273 26 0 chr13 79791716 79791793 -40492519 + RNERVK23-int LTR ERVK 191 269 -7948 3 1193 1101 58 0 7 chr13 79791805 79791944 -40492368 + B1_Mus2 SINE Alu 1 138 -9 3 1193 396 59 0 0 chr13 79791944 79791995 -40492317 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 3 1193 24 32 0 0 chr13 79791997 79792028 -40492284 + AT_rich Low_complexity Low_complexity 1 31 0 3 1193 405 0 0 0 chr13 79792214 79792259 -40492053 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 3 1193 1063 76 0 14 chr13 79792259 79792405 -40491907 - B1_Mm SINE Alu -2 145 2 3 1193 1398 23 28 0 chr13 79792422 79792598 -40491714 - B2_Mm1a SINE B2 0 193 13 3 1193 1998 312 58 66 chr13 79793026 79794173 -40490139 + RNERVK23-int LTR ERVK 848 1985 -6232 3 1193 483 145 0 0 chr13 79794174 79794243 -40490069 + tRNA-Lys-AAG tRNA tRNA 2 70 -6 3 1193 2657 279 18 18 chr13 79794343 79795123 -40489189 + RNERVK23-int LTR ERVK 7035 7814 -403 3 1193 266 264 20 108 chr13 79795250 79795352 -40488960 + ETnERV2-int LTR ERVK 6750 6842 -564 3 1193 455 248 0 9 chr13 79795701 79795811 -40488501 + RNLTR23 LTR ERVK 534 642 0 3 1193 4726 226 19 27 chr13 79795812 79796947 -40487365 + Lx3C LINE L1 5850 6974 -2 3 1193 24 32 0 0 chr13 79796974 79797005 -40487307 + AT_rich Low_complexity Low_complexity 1 31 0 3 1193 870 300 27 41 chr13 79797044 79797409 -40486903 - ORR1E-int LTR MaLR -998 372 13 3 1193 404 282 0 16 chr13 79797422 79797571 -40486741 - ORR1E LTR MaLR -4 375 226 3 1193 1241 98 4 0 chr13 79797588 79797853 -40486459 + (GAAA)n Simple_repeat Simple_repeat 1 266 0 3 1193 1921 187 44 13 chr13 79798074 79798443 -40485869 + RLTR25B LTR ERVK 1 382 -721 3 1193 1792 133 102 3 chr13 79798443 79798737 -40485575 - ORR1A3 LTR MaLR -2 324 2 3 1193 1921 187 44 13 chr13 79798737 79798752 -40485560 + RLTR25B LTR ERVK 383 397 -706 3 1193 9623 156 57 9 chr13 79798764 79800574 -40483738 - ORR1A3-int LTR MaLR -67 1896 1 3 1193 1595 153 67 64 chr13 79800578 79800892 -40483420 - ORR1A3 LTR MaLR -8 318 4 3 1193 2217 170 52 24 chr13 79800892 79801430 -40482882 + RLTR25B LTR ERVK 371 1005 -98 3 1193 255 114 0 0 chr13 79801451 79801495 -40482817 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1193 366 205 330 16 chr13 79801550 79801688 -40482624 + RLTR25A LTR ERVK 849 1103 0 3 1193 314 367 33 13 chr13 79801777 79801929 -40482383 + RSINE1 SINE B4 3 157 -8 3 1193 358 251 75 19 chr13 79802565 79802707 -40481605 - MER20 DNA MER1_type -69 150 1 3 1193 229 286 122 16 chr13 79802798 79802986 -40481326 - L1ME3A LINE L1 -123 6050 5843 3 1193 325 338 12 6 chr13 79803127 79803291 -40481021 - L1M5 LINE L1 -2709 3437 3273 4 1193 1640 223 62 62 chr13 79803536 79804005 -40480307 + RLTR11A LTR ERVK 1 469 -59 4 1193 1067 370 77 14 chr13 79804229 79804942 -40479370 - Lx8 LINE L1 -459 7014 6257 4 1193 226 189 0 36 chr13 79805015 79805070 -40479242 + (TCTCTG)n Simple_repeat Simple_repeat 3 55 0 4 1193 217 244 0 0 chr13 79805090 79805135 -40479177 + (TATATG)n Simple_repeat Simple_repeat 1 45 0 4 1193 5152 115 13 3 chr13 79805180 79805950 -40478362 - Lx2 LINE L1 -2 6995 6218 4 1193 22 88 0 0 chr13 79806305 79806362 -40477950 + AT_rich Low_complexity Low_complexity 1 57 0 4 1193 213 39 0 0 chr13 79807009 79807035 -40477277 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1193 982 49 7 47 chr13 79807035 79807152 -40477160 - B1_Mus1 SINE Alu -3 145 34 4 1193 1946 99 28 22 chr13 79807152 79807472 -40476840 + RLTRETN_Mm LTR ERVK 1 322 0 4 1193 982 49 7 47 chr13 79807472 79807503 -40476809 - B1_Mus1 SINE Alu -115 33 3 4 1193 346 247 121 45 chr13 79807703 79807902 -40476410 + Lx9 LINE L1 5838 6051 -1593 4 1193 5258 91 7 27 chr13 79807913 79808738 -40475574 - RLTR13C2 LTR ERVK 0 983 1 4 1193 2033 302 40 27 chr13 79808738 79809565 -40474747 + Lx9 LINE L1 6636 7473 -171 4 1193 1596 249 114 26 chr13 79809572 79810067 -40474245 - RMER19C LTR ERVK -6 605 25 4 1193 21 36 0 0 chr13 79810190 79810218 -40474094 + AT_rich Low_complexity Low_complexity 1 28 0 4 1193 3006 20 0 3 chr13 79810223 79810570 -40473742 + ORR1A0 LTR MaLR 1 346 0 4 1193 496 308 41 5 chr13 79810605 79810801 -40473511 + B3 SINE B2 5 207 -9 4 1193 1874 266 44 4 chr13 79810983 79811462 -40472850 - Lx6 LINE L1 -11 7449 6952 4 1193 216 158 0 0 chr13 79813333 79813371 -40470941 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1193 882 0 0 0 chr13 79814727 79814825 -40469487 + (TTCTC)n Simple_repeat Simple_repeat 2 99 0 4 1193 495 48 0 0 chr13 79814826 79814888 -40469424 + (TCC)n Simple_repeat Simple_repeat 3 64 0 4 1193 28 0 0 0 chr13 79815160 79815188 -40469124 + AT_rich Low_complexity Low_complexity 1 28 0 4 1193 22956 124 16 7 chr13 79815393 79820221 -40464091 - L1_Mus2 LINE L1 -9 6557 1651 4 1193 493 289 124 23 chr13 79820214 79820479 -40463833 - L1VL2 LINE L1 -5969 366 75 4 1193 7280 100 6 18 chr13 79821102 79822268 -40462044 - L1_Mus3 LINE L1 -10 6628 5476 4 149 6518 139 14 14 chr13 79822256 79823320 -40460992 - Lx3A LINE L1 -102 6879 5816 4 1194 262 268 0 0 chr13 79823545 79823601 -40460711 - Lx2A LINE L1 -122 6886 6831 4 1194 451 260 235 20 chr13 79823670 79823734 -40460578 - MER44C DNA MER2_type -23 710 630 4 1194 510 129 0 0 chr13 79823734 79823819 -40460493 + (CA)n Simple_repeat Simple_repeat 2 86 0 4 1194 863 314 182 24 chr13 79823819 79824335 -40459977 - MER44C DNA MER2_type -104 629 29 4 1194 351 0 0 0 chr13 79824465 79824504 -40459808 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 1194 1297 239 31 31 chr13 79826381 79826735 -40457577 - MTEb LTR MaLR -20 359 6 4 1194 4299 177 31 8 chr13 79827200 79827998 -40456314 - Lx2B LINE L1 -4 6996 6180 4 1194 3693 165 17 0 chr13 79828001 79828660 -40455652 + L1_Mm LINE L1 5130 5799 -84 4 1194 216 0 0 0 chr13 79829786 79829810 -40454502 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1194 613 348 66 29 chr13 79830143 79830552 -40453760 - Lx8 LINE L1 -861 6612 6189 4 1194 240 35 0 0 chr13 79831054 79831083 -40453229 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1194 25 51 0 0 chr13 79831312 79831351 -40452961 + AT_rich Low_complexity Low_complexity 1 39 0 4 1194 268 325 29 118 chr13 79832035 79832171 -40452141 - B4A SINE B4 -164 128 5 4 1194 30 59 0 0 chr13 79832179 79832230 -40452082 + AT_rich Low_complexity Low_complexity 1 51 0 4 1194 1048 302 27 27 chr13 79832473 79832803 -40451509 + MTEa LTR MaLR 50 379 0 4 1194 357 24 0 0 chr13 79833673 79833715 -40450597 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 4 1194 27 29 0 0 chr13 79833718 79833752 -40450560 + AT_rich Low_complexity Low_complexity 1 34 0 4 1194 621 204 98 8 chr13 79833975 79834108 -40450204 - B1_Mus2 SINE Alu 0 147 3 4 1194 709 238 106 10 chr13 79834622 79834924 -40449388 + Lx9 LINE L1 7314 7644 0 4 1194 186 227 56 70 chr13 79836845 79836916 -40447396 - L3 LINE CR1 -209 4280 4211 4 1194 198 0 0 0 chr13 79837967 79837989 -40446323 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 4 1194 21 57 0 0 chr13 79838020 79838055 -40446257 + AT_rich Low_complexity Low_complexity 1 35 0 4 1194 28 48 0 0 chr13 79839112 79839154 -40445158 + AT_rich Low_complexity Low_complexity 1 42 0 4 1194 492 18 0 0 chr13 79839296 79839353 -40444959 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1194 207 0 0 0 chr13 79839353 79839375 -40444937 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1194 334 252 24 120 chr13 79839612 79839689 -40444623 + ORR1A3-int LTR MaLR 555 615 -1348 4 1194 1451 44 0 0 chr13 79839689 79839870 -40444442 + MT2C_Mm LTR ERVL 3 183 -292 4 1194 872 120 38 0 chr13 79839847 79839980 -40444332 + MT2_Mm LTR ERVL 278 415 -78 4 1194 251 154 0 0 chr13 79840004 79840043 -40444269 + L1Md_F LINE L1 391 429 -6190 4 1194 14080 78 14 1 chr13 79840012 79842752 -40441560 + L1Md_F LINE L1 304 3049 -2837 4 1194 1819 212 39 22 chr13 79842938 79843347 -40440965 + MTC LTR MaLR 2 417 -4 4 1194 23 0 0 0 chr13 79843461 79843484 -40440828 + AT_rich Low_complexity Low_complexity 1 23 0 4 1194 931 272 133 48 chr13 79845162 79845372 -40438940 - Lx7 LINE L1 0 7696 7428 4 1194 408 40 0 0 chr13 79845372 79845422 -40438890 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1194 931 272 133 48 chr13 79845422 79845716 -40438596 - Lx7 LINE L1 -269 7427 7149 4 1194 467 266 0 18 chr13 79845712 79845823 -40438489 - Lx7 LINE L1 -679 7017 6909 4 1194 457 81 0 0 chr13 79846548 79846610 -40437702 - Lx2 LINE L1 -1153 5844 5783 4 1194 1607 82 0 5 chr13 79846638 79846845 -40437467 + L1_Mm LINE L1 5372 5577 -306 4 1194 568 53 0 0 chr13 79846844 79846919 -40437393 - Lx2 LINE L1 -1204 5793 5719 4 1194 1572 161 59 3 chr13 79846922 79847209 -40437103 - ORR1A1 LTR MaLR -43 303 1 4 1194 6495 137 28 12 chr13 79847209 79848259 -40436053 - ORR1A1-int LTR MaLR 0 1963 898 4 1194 1596 189 32 6 chr13 79848278 79848619 -40435693 - MYSERV16_I-int LTR ERVK -272 2054 1705 4 1194 1190 102 5 0 chr13 79848625 79848830 -40435482 - MusHAL1 LINE L1 0 2712 2507 4 1194 6401 117 7 13 chr13 79848829 79849801 -40434511 - L1_Mus3 LINE L1 -1 6637 5672 4 1194 1573 137 134 60 chr13 79849798 79850148 -40434164 + L1_Mus2 LINE L1 6191 6566 0 4 1194 22 35 0 0 chr13 79850233 79850262 -40434050 + AT_rich Low_complexity Low_complexity 1 29 0 4 1194 267 31 0 0 chr13 79850263 79850295 -40434017 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 4 1194 18474 153 79 35 chr13 79850295 79851159 -40433153 - L1VL4 LINE L1 -206 5677 4867 4 1194 3194 67 28 5 chr13 79851159 79851595 -40432717 + L1Md_F2 LINE L1 6136 6581 -1 4 1194 18474 153 79 35 chr13 79851595 79854488 -40429824 - L1VL4 LINE L1 -1017 4866 1753 4 1194 203 175 0 0 chr13 79854488 79854528 -40429784 + T-rich Low_complexity Low_complexity 1 40 0 4 1194 40253 25 4 6 chr13 79854575 79861177 -40423135 - L1Md_T LINE L1 0 6582 1 4 1194 3421 167 21 30 chr13 79861179 79862452 -40421860 - L1VL4 LINE L1 -2149 1765 571 4 1194 23 0 0 0 chr13 79862480 79862503 -40421809 + AT_rich Low_complexity Low_complexity 1 23 0 4 1194 6846 98 25 3 chr13 79862503 79863552 -40420760 - L1VL4 LINE L1 -200 3359 2288 4 1194 1960 92 0 39 chr13 79863552 79863857 -40420455 - L1Md_F2 LINE L1 0 6582 6290 4 1194 5023 38 0 5 chr13 79863857 79864460 -40419852 + L1Md_F2 LINE L1 5680 6279 -303 4 1194 8324 104 25 20 chr13 79864458 79866120 -40418192 - L1VL4 LINE L1 -1280 2279 607 4 1194 3190 164 71 15 chr13 79866135 79866743 -40417569 - Lx3C LINE L1 -9 6967 6326 4 1194 1384 145 20 0 chr13 79866745 79866994 -40417318 - MYSERV16_I-int LTR ERVK -1015 1311 1058 4 1194 3923 199 54 35 chr13 79866990 79868043 -40416269 - MYSERV16_I-int LTR ERVK -1461 1381 5 4 1194 679 224 82 118 chr13 79869000 79869485 -40414827 - RLTR20C LTR ERVK 0 578 1 4 1194 3310 266 143 27 chr13 79870719 79872256 -40412056 - L1_Mur2 LINE L1 -837 5040 3326 4 1194 4860 134 16 3 chr13 79872260 79873035 -40411277 - Lx LINE L1 -8 6646 5862 4 1194 1613 187 83 6 chr13 79873039 79873378 -40410934 - L1Md_F LINE L1 -5526 993 629 4 1194 318 198 271 9 chr13 79873381 79873488 -40410824 - L1Md_F LINE L1 -5807 712 578 4 1194 210 37 0 0 chr13 79873795 79873822 -40410490 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1194 234 345 0 12 chr13 79873844 79873929 -40410383 - L1VL2 LINE L1 -6120 215 132 4 1194 2489 200 51 19 chr13 79874681 79875588 -40408724 + Lx4B LINE L1 834 1786 -4091 4 1194 7124 165 27 87 chr13 79875586 79875863 -40408449 + Lx4B LINE L1 4363 4594 -1283 4 1194 3636 42 7 2 chr13 79875863 79876314 -40407998 - L1Md_F3 LINE L1 -1 6583 6131 4 1194 7124 165 27 87 chr13 79876314 79877069 -40407243 + Lx4B LINE L1 4595 5363 -514 4 1194 1113 88 0 0 chr13 79877069 79877216 -40407096 + B1_Mus1 SINE Alu 2 148 0 4 1194 7124 179 39 43 chr13 79877216 79878623 -40405689 + Lx4B LINE L1 5364 6740 -318 4 1194 276 261 15 0 chr13 79878641 79878706 -40405606 + Lx4B LINE L1 6858 6923 -135 4 1194 406 296 48 80 chr13 79878881 79879131 -40405181 + L1MA4A LINE L1 5109 5350 -793 4 1194 376 324 114 5 chr13 79879184 79879553 -40404759 + L1MA4A LINE L1 5496 5904 -399 4 1194 234 304 11 11 chr13 79879572 79879665 -40404647 + (TATATG)n Simple_repeat Simple_repeat 6 98 0 4 1194 202 286 0 0 chr13 79879861 79879910 -40404402 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1194 2011 117 46 12 chr13 79880184 79880529 -40403783 - L1_Mur1 LINE L1 -698 5188 4832 4 1194 3073 143 48 9 chr13 79880526 79881068 -40403244 + L1_Mur1 LINE L1 5311 5873 -13 4 1194 5113 91 8 113 chr13 79881068 79882061 -40402251 - RMER17D LTR ERVK 0 889 1 4 1194 4349 183 106 12 chr13 79882063 79883059 -40401253 + Lx3B LINE L1 5867 6987 -10 4 1194 189 0 0 0 chr13 79883074 79883095 -40401217 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4 1194 24 67 0 0 chr13 79883256 79883301 -40401011 + AT_rich Low_complexity Low_complexity 1 45 0 4 1194 432 263 49 31 chr13 79883544 79883768 -40400544 - L1MC1 LINE L1 -412 5921 5694 4 1194 615 27 0 0 chr13 79883819 79883892 -40400420 + (CA)n Simple_repeat Simple_repeat 2 74 0 4 1194 23 0 0 0 chr13 79884812 79884835 -40399477 + AT_rich Low_complexity Low_complexity 1 23 0 4 1194 440 361 0 0 chr13 79884983 79885113 -40399199 - B3 SINE B2 -86 130 1 4 1194 795 288 71 65 chr13 79885146 79885514 -40398798 - ORR1D2 LTR MaLR 0 370 1 4 1194 847 339 145 24 chr13 79885824 79885906 -40398406 - Lx8 LINE L1 -348 7125 7048 4 1194 2972 45 3 11 chr13 79885906 79886286 -40398026 + L1Md_F3 LINE L1 6207 6583 -1 4 1194 847 339 145 24 chr13 79886286 79886817 -40397495 - Lx8 LINE L1 -426 7047 6438 4 1194 1160 187 30 0 chr13 79886817 79887047 -40397265 - RMER6C LTR ERVK 0 690 454 4 1194 223 254 0 40 chr13 79887227 79887301 -40397011 + CT-rich Low_complexity Low_complexity 2 72 0 5 1194 33 100 0 0 chr13 79887418 79887528 -40396784 + AT_rich Low_complexity Low_complexity 1 110 0 5 1194 25 65 0 0 chr13 79887604 79887650 -40396662 + AT_rich Low_complexity Low_complexity 1 46 0 5 1194 23 33 0 0 chr13 79887699 79887729 -40396583 + AT_rich Low_complexity Low_complexity 1 30 0 5 1194 21 57 0 0 chr13 79887853 79887888 -40396424 + AT_rich Low_complexity Low_complexity 1 35 0 5 1194 23 0 0 0 chr13 79887949 79887972 -40396340 + AT_rich Low_complexity Low_complexity 1 23 0 5 1194 32 43 0 0 chr13 79888201 79888247 -40396065 + AT_rich Low_complexity Low_complexity 1 46 0 5 1194 21 71 0 0 chr13 79888344 79888386 -40395926 + AT_rich Low_complexity Low_complexity 1 42 0 5 1194 335 373 78 37 chr13 79889327 79889622 -40394690 + MLT1D LTR MaLR 83 389 -116 5 1194 242 73 0 0 chr13 79889956 79889997 -40394315 + L1_Mus2 LINE L1 6525 6565 -1 5 1194 3418 37 0 0 chr13 79890048 79890454 -40393858 - L1Md_A LINE L1 -376 6206 5801 5 1194 3022 36 0 3 chr13 79890458 79890823 -40393489 + L1Md_A LINE L1 6217 6580 -2 5 1194 797 92 8 0 chr13 79890837 79890957 -40393355 + (GAAA)n Simple_repeat Simple_repeat 4 124 0 5 1194 2680 158 29 63 chr13 79890985 79892401 -40391911 + L1Md_F LINE L1 123 1523 -2294 5 1194 1428 300 58 7 chr13 79892403 79893007 -40391305 - Lx9 LINE L1 -52 7592 6958 5 1194 22 70 0 0 chr13 79893439 79893482 -40390830 + AT_rich Low_complexity Low_complexity 1 43 0 5 1194 352 331 56 40 chr13 79893529 79893655 -40390657 + LTR16A LTR ERVL 63 190 -261 5 1194 183 308 0 0 chr13 79893789 79893828 -40390484 + MER5A DNA MER1_type 5 43 -146 5 1194 35374 69 1 1 chr13 79894031 79899957 -40384355 - L1Md_F2 LINE L1 0 6585 563 5 1194 592 158 0 0 chr13 79899950 79900045 -40384267 - L1Md_F2 LINE L1 -6282 337 243 5 1194 440 18 18 0 chr13 79901183 79901240 -40383072 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 5 1194 4695 129 38 5 chr13 79901822 79902561 -40381751 + Lx LINE L1 5881 6643 -11 5 1194 342 175 35 12 chr13 79902595 79902681 -40381631 + MTC LTR MaLR 325 421 0 5 1194 36 70 0 0 chr13 79902708 79902779 -40381533 + AT_rich Low_complexity Low_complexity 1 71 0 5 1194 222 256 0 0 chr13 79903512 79903590 -40380722 + (CA)n Simple_repeat Simple_repeat 1 78 0 5 1194 22 35 0 0 chr13 79906148 79906177 -40378135 + AT_rich Low_complexity Low_complexity 1 29 0 5 1194 251 303 51 43 chr13 79906815 79906953 -40377359 - L1MA9 LINE L1 -299 6013 5875 5 1194 295 293 158 49 chr13 79907162 79907345 -40376967 + RMER15 LTR ERVL 296 498 -77 5 1194 299 386 14 0 chr13 79907526 79907666 -40376646 + RMER15-int LTR ERVL 200 341 -4658 5 1194 392 346 42 23 chr13 79907767 79907983 -40376329 + RMER15-int LTR ERVL 1428 1647 -3352 5 1194 27 73 0 0 chr13 79908490 79908545 -40375767 + AT_rich Low_complexity Low_complexity 1 55 0 5 1194 262 325 67 67 chr13 79908603 79908870 -40375442 + RMER15-int LTR ERVL 2005 2271 -2728 5 1194 1916 212 16 16 chr13 79908871 79909245 -40375067 + ORR1C1 LTR MaLR 1 374 -4 5 1194 330 200 15 0 chr13 79909505 79909570 -40374742 + RMER15-int LTR ERVL 4269 4334 -665 5 1194 417 360 64 16 chr13 79910214 79910525 -40373787 + Lx8 LINE L1 6403 6728 -745 5 1194 276 280 95 21 chr13 79911041 79911136 -40373176 + RMER15 LTR ERVL 342 443 -132 5 1194 1149 234 89 49 chr13 79911142 79911337 -40372975 + ORR1C2 LTR MaLR 1 190 -194 5 1194 300 27 0 0 chr13 79911337 79911374 -40372938 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1194 1149 234 89 49 chr13 79911374 79911547 -40372765 + ORR1C2 LTR MaLR 191 384 0 5 1194 606 287 45 148 chr13 79911547 79911650 -40372662 + ORR1C2-int LTR MaLR 1 87 -1876 5 1194 1051 88 0 0 chr13 79911650 79911786 -40372526 + B1_Mus2 SINE Alu 5 140 -7 5 1194 703 261 58 57 chr13 79911786 79912034 -40372278 + ORR1C2-int LTR MaLR 88 316 -1647 5 1194 1056 293 15 103 chr13 79912045 79912096 -40372216 - ORR1C1 LTR MaLR -8 376 340 5 1194 1152 54 0 20 chr13 79912096 79912107 -40372205 - B1_Mm SINE Alu 0 147 138 5 1194 243 0 0 0 chr13 79912107 79912134 -40372178 + (TTG)n Simple_repeat Simple_repeat 2 28 0 5 1194 1152 54 0 20 chr13 79912134 79912272 -40372040 - B1_Mm SINE Alu -10 137 1 5 1194 1185 269 12 81 chr13 79912272 79912616 -40371696 - ORR1C1 LTR MaLR -43 335 16 5 1194 231 187 117 26 chr13 79912623 79912700 -40371612 - Lx5 LINE L1 -1 7049 6966 5 1194 576 85 236 0 chr13 79912744 79912850 -40371462 - L1_Mus2 LINE L1 0 6566 6436 5 1194 2659 263 43 7 chr13 79912874 79913579 -40370733 - ORR1C1-int LTR MaLR -3 1506 777 5 1194 283 315 104 61 chr13 79913780 79914010 -40370302 + RMER20B LTR ERVK 135 374 -253 5 1194 861 210 19 29 chr13 79914196 79914402 -40369910 - ORR1C1-int LTR MaLR -900 609 406 5 1194 6084 197 50 32 chr13 79914402 79914993 -40369319 + Lx6 LINE L1 3581 4171 -1709 5 1194 396 0 0 0 chr13 79914993 79915037 -40369275 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 5 1194 1116 71 0 0 chr13 79915046 79915187 -40369125 - B1_Mus1 SINE Alu -7 141 1 5 1194 6084 197 50 32 chr13 79915187 79915628 -40368684 + Lx6 LINE L1 4172 4632 -1248 5 1194 366 23 0 0 chr13 79915628 79915671 -40368641 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1194 6084 197 50 32 chr13 79915671 79916141 -40368171 + Lx6 LINE L1 4633 5120 -760 5 1194 39 38 0 0 chr13 79916390 79916443 -40367869 + AT_rich Low_complexity Low_complexity 1 53 0 5 1194 849 273 21 16 chr13 79916506 79916748 -40367564 - RLTR16 LTR ERVK -262 243 1 5 1194 230 277 45 194 chr13 79916748 79917062 -40367250 - RLTR15 LTR ERVK -18 341 75 5 1194 194 80 59 20 chr13 79917119 79917170 -40367142 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1194 2356 223 55 15 chr13 79917194 79917246 -40367066 + Lx6 LINE L1 5252 5302 -578 5 1194 1367 199 14 113 chr13 79917246 79917609 -40366703 - ORR1A4 LTR MaLR -2 327 1 5 1194 2356 240 52 18 chr13 79917609 79918457 -40365855 + Lx6 LINE L1 5303 6168 -1292 5 1194 1899 82 4 4 chr13 79918532 79918827 -40365485 - L1_Mus2 LINE L1 0 6566 6311 5 1194 189 203 0 0 chr13 79918827 79918851 -40365461 + T-rich Low_complexity Low_complexity 2 25 0 5 1194 3796 65 2 0 chr13 79918852 79919331 -40364981 - L1_Mus1 LINE L1 -1 6566 6087 5 1194 8453 106 7 5 chr13 79919334 79920055 -40364257 + L1_Mus1 LINE L1 4659 5387 -496 5 1194 4408 16 0 0 chr13 79920055 79920548 -40363764 + MT2_Mm LTR ERVL 1 493 0 5 1194 8453 78 4 1 chr13 79920548 79921236 -40363076 + L1_Mus1 LINE L1 5388 6071 -496 5 1194 1281 73 0 0 chr13 79921233 79921397 -40362915 - L1_Mus2 LINE L1 -240 6326 6163 5 1194 243 0 0 0 chr13 79922005 79922032 -40362280 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1194 700 32 21 0 chr13 79922605 79922700 -40361612 + (TAGA)n Simple_repeat Simple_repeat 3 99 0 5 1194 202 244 0 0 chr13 79924638 79924683 -40359629 + T-rich Low_complexity Low_complexity 1 45 0 5 1194 234 264 0 0 chr13 79924728 79924781 -40359531 + A-rich Low_complexity Low_complexity 3 55 0 5 1194 210 164 0 0 chr13 79924891 79924946 -40359366 + T-rich Low_complexity Low_complexity 1 55 0 5 1194 225 342 51 0 chr13 79925334 79925366 -40358946 - ID4_ SINE ID 0 83 50 5 1194 351 0 0 0 chr13 79925366 79925405 -40358907 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1194 225 342 51 0 chr13 79925405 79925451 -40358861 - ID4_ SINE ID -34 49 2 5 1194 281 313 44 30 chr13 79925458 79925593 -40358719 - ID_B1 SINE B4 -2 222 86 5 1194 890 81 81 0 chr13 79925673 79925797 -40358515 + B1_Mus2 SINE Alu 2 135 -12 5 1194 506 16 0 16 chr13 79925797 79925861 -40358451 + (CAAAA)n Simple_repeat Simple_repeat 3 65 0 5 1194 425 309 72 0 chr13 79926078 79926217 -40358095 + RSINE1 SINE B4 6 154 -11 5 1194 613 98 10 19 chr13 79926571 79926588 -40357724 + (TTTC)n Simple_repeat Simple_repeat 4 20 0 5 1194 468 0 0 0 chr13 79926588 79926640 -40357672 + (TCCC)n Simple_repeat Simple_repeat 1 52 0 5 1194 613 98 10 19 chr13 79926640 79926726 -40357586 + (TTTC)n Simple_repeat Simple_repeat 2 87 0 5 1194 1251 173 9 0 chr13 79926735 79926961 -40357351 - Lx2 LINE L1 -6 6991 6764 5 1194 5874 148 40 18 chr13 79926962 79928173 -40356139 - Lx2 LINE L1 -365 6632 5403 5 1194 6880 122 9 8 chr13 79928168 79929932 -40354380 - L1VL4 LINE L1 -1579 1980 213 5 1194 437 357 30 43 chr13 79930140 79930374 -40353938 - MER2 DNA MER2_type -14 331 101 5 1194 201 39 0 0 chr13 79931173 79931199 -40353113 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1194 638 357 44 19 chr13 79931364 79931635 -40352677 + B4A SINE B4 13 290 -2 5 1194 855 140 0 0 chr13 79931651 79931794 -40352518 + (TA)n Simple_repeat Simple_repeat 2 144 0 5 1194 32 26 0 0 chr13 79931829 79931868 -40352444 + AT_rich Low_complexity Low_complexity 1 39 0 5 1194 6779 97 15 1 chr13 79932811 79933818 -40350494 - L1_Mur1 LINE L1 -1102 4784 3764 5 1194 6933 191 20 8 chr13 79933814 79935120 -40349192 + Lx2B LINE L1 5652 6972 -28 5 1194 280 0 24 24 chr13 79935123 79935164 -40349148 + (TAA)n Simple_repeat Simple_repeat 2 42 0 5 1194 255 158 0 0 chr13 79935172 79935210 -40349102 - RMER6A LTR ERVK -70 686 649 5 1194 7124 78 8 4 chr13 79935270 79936209 -40348103 - L1Md_F2 LINE L1 -2 6580 5639 5 1194 1449 140 178 15 chr13 79936225 79936551 -40347761 - RMER6A LTR ERVK -93 663 285 5 1194 420 326 77 56 chr13 79936690 79937050 -40347262 + L1M5 LINE L1 3062 3429 -2717 5 1194 360 0 0 0 chr13 79937648 79937688 -40346624 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1194 334 277 0 24 chr13 79937803 79937888 -40346424 - RMER15 LTR ERVL -183 392 310 5 1194 180 0 0 0 chr13 79938042 79938062 -40346250 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1194 609 158 52 22 chr13 79938662 79938798 -40345514 + URR1A DNA MER1_type 69 208 -18 5 1194 697 284 21 67 chr13 79939916 79940162 -40344150 + L1_Mur3 LINE L1 862 1091 -6621 5 1194 432 0 0 0 chr13 79940162 79940210 -40344102 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1194 697 284 21 67 chr13 79940210 79940291 -40344021 + L1_Mur3 LINE L1 1092 1173 -6539 5 1194 4589 203 56 5 chr13 79940296 79941260 -40343052 + Lx2B LINE L1 5985 6997 -3 5 1194 30258 70 1 1 chr13 79941493 79946695 -40337617 + L1Md_F2 LINE L1 305 5589 -297 5 1194 7641 53 19 0 chr13 79946695 79947672 -40336640 + L1Md_F2 LINE L1 5590 6585 0 5 1194 27 0 0 0 chr13 79948697 79948724 -40335588 + AT_rich Low_complexity Low_complexity 1 27 0 5 1194 32 67 0 0 chr13 79949396 79949456 -40334856 + AT_rich Low_complexity Low_complexity 1 60 0 5 1194 1289 356 72 49 chr13 79950333 79951045 -40333267 + MTE-int LTR MaLR 368 1095 -485 5 1194 608 345 34 17 chr13 79951041 79951274 -40333038 + MTE2b LTR MaLR 131 367 -12 5 1194 21 0 0 0 chr13 79951637 79951658 -40332654 + AT_rich Low_complexity Low_complexity 1 21 0 5 1194 1117 96 7 0 chr13 79951658 79951804 -40332508 - B1_Mus2 SINE Alu 0 147 1 5 1194 608 310 136 67 chr13 79952095 79952145 -40332167 - ORR1D1 LTR MaLR -14 370 333 5 1194 4782 133 84 11 chr13 79952145 79952985 -40331327 + RMER17A2 LTR ERVK 1 902 -4 5 1194 683 288 83 28 chr13 79952985 79953280 -40331032 - ORR1D1 LTR MaLR -52 332 1 5 1194 261 0 0 0 chr13 79953301 79953330 -40330982 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1195 1709 232 13 35 chr13 79954178 79954426 -40329886 + Lx5 LINE L1 806 1032 -5952 5 1195 810 39 0 0 chr13 79954426 79954528 -40329784 + (CA)n Simple_repeat Simple_repeat 1 102 0 5 1195 20494 190 43 21 chr13 79954528 79956447 -40327865 + Lx5 LINE L1 1032 2991 -2886 5 1195 411 38 0 0 chr13 79956447 79956500 -40327812 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1195 20494 203 43 21 chr13 79956500 79960468 -40323844 + Lx5 LINE L1 2992 7047 -3 5 1195 804 368 58 19 chr13 79960626 79960986 -40323326 - MTE2b-int LTR MaLR -529 1051 678 5 1195 7162 121 5 5 chr13 79960997 79962046 -40322266 - Lx LINE L1 -18 6636 5588 6 1195 6406 185 25 106 chr13 79962040 79963248 -40321064 + L1_Mm LINE L1 4062 5254 -626 6 1195 686 66 43 14 chr13 79963248 79963387 -40320925 + RMER17B LTR ERVK 308 450 -508 6 1195 194 0 39 0 chr13 79963390 79963416 -40320896 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1195 6406 185 25 106 chr13 79963416 79963713 -40320599 + L1_Mm LINE L1 5258 5576 -307 6 1195 413 324 70 28 chr13 79963713 79963926 -40320386 - MTE2b-int LTR MaLR -884 696 475 5 1195 577 299 130 81 chr13 79963938 79964222 -40320090 - MTE2b-int LTR MaLR -1281 299 2 5 1195 1020 317 76 26 chr13 79964224 79964567 -40319745 - MTE2b LTR MaLR -1 378 19 5 1195 2451 4 0 0 chr13 79964621 79964894 -40319418 + L1Md_A LINE L1 6310 6582 0 6 1195 1104 234 184 40 chr13 79965415 79965981 -40318331 - RMER6C LTR ERVK -4 716 202 6 1195 9562 91 24 8 chr13 79965990 79967435 -40316877 - MusHAL1 LINE L1 0 2712 1244 6 1195 279 240 240 0 chr13 79967443 79967543 -40316769 - RMER6C LTR ERVK -566 124 1 6 1195 4299 101 3 7 chr13 79967883 79968503 -40315809 - L1_Mus2 LINE L1 0 6566 5949 6 1195 4090 126 48 10 chr13 79968807 79969542 -40314770 + RMER17A LTR ERVK 4 751 0 6 1195 25 65 0 0 chr13 79969814 79969860 -40314452 + AT_rich Low_complexity Low_complexity 1 46 0 6 1195 1062 273 78 55 chr13 79970186 79970693 -40313619 + MT2B LTR ERVL 2 601 0 6 1195 21 71 0 0 chr13 79972026 79972068 -40312244 + AT_rich Low_complexity Low_complexity 1 42 0 6 1195 236 310 0 22 chr13 79972197 79972286 -40312026 + B4A SINE B4 2 88 -204 6 1195 321 26 0 0 chr13 79972393 79972431 -40311881 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 6 1195 219 125 0 0 chr13 79973046 79973086 -40311226 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1195 351 0 0 0 chr13 79973087 79973126 -40311186 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1195 315 0 0 0 chr13 79973126 79973160 -40311152 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1195 24 72 0 14 chr13 79973293 79973335 -40310977 + AT_rich Low_complexity Low_complexity 1 42 0 6 1195 2787 55 3 0 chr13 79973335 79973680 -40310632 - ORR1A1 LTR MaLR 0 346 1 6 1195 24 72 0 14 chr13 79973680 79973707 -40310605 + AT_rich Low_complexity Low_complexity 1 27 0 6 1195 905 217 92 83 chr13 79973859 79974185 -40310127 + RLTR15 LTR ERVK 1 329 -30 6 1195 220 333 12 24 chr13 79974658 79974741 -40309571 - ID4_ SINE ID -1 82 1 6 1195 6883 93 7 7 chr13 79975834 79976921 -40307391 - Lx3_Mus LINE L1 -427 6582 5497 6 1195 2376 122 28 0 chr13 79976917 79977269 -40307043 + Lx3_Mus LINE L1 6627 6988 -21 6 1195 236 53 26 0 chr13 79977269 79977307 -40307005 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1195 30 0 0 0 chr13 79978126 79978156 -40306156 + AT_rich Low_complexity Low_complexity 1 30 0 6 1195 678 25 0 0 chr13 79978525 79978605 -40305707 + (CA)n Simple_repeat Simple_repeat 1 80 0 6 1195 287 259 36 24 chr13 79978730 79978813 -40305499 - ORR1E LTR MaLR -275 84 1 6 1195 22 0 0 0 chr13 79980634 79980656 -40303656 + AT_rich Low_complexity Low_complexity 1 22 0 6 1195 1876 141 0 25 chr13 79980978 79981298 -40303014 - Lx LINE L1 -10 6644 6333 6 1195 4005 171 4 3 chr13 79981298 79982027 -40302285 + L1_Mur2 LINE L1 3502 4231 -1646 6 1195 208 221 14 42 chr13 79982378 79982449 -40301863 + GA-rich Low_complexity Low_complexity 6 74 0 6 1195 360 0 0 0 chr13 79982470 79982510 -40301802 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1195 351 0 0 0 chr13 79982510 79982548 -40301764 + (GA)n Simple_repeat Simple_repeat 2 40 0 6 1195 417 39 0 0 chr13 79982915 79982966 -40301346 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1195 432 0 0 0 chr13 79984515 79984563 -40299749 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1195 24 77 0 0 chr13 79985560 79985612 -40298700 + AT_rich Low_complexity Low_complexity 1 52 0 6 1195 5052 149 38 13 chr13 79985828 79986724 -40297588 - Lx3C LINE L1 -4 6972 6055 6 1195 9654 127 38 22 chr13 79986965 79989489 -40294823 - L1_Mus3 LINE L1 0 6638 4075 6 1195 6045 134 17 36 chr13 79989483 79991370 -40292942 - L1VL4 LINE L1 -1675 1884 42 6 1195 22 56 0 0 chr13 79991558 79991594 -40292718 + AT_rich Low_complexity Low_complexity 1 36 0 6 1195 216 97 0 0 chr13 79991613 79991644 -40292668 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1195 808 198 18 6 chr13 79991665 79991833 -40292479 - Lx3B LINE L1 -4 6969 6800 6 1195 4589 165 21 13 chr13 79991833 79993062 -40291250 - Lx3B LINE L1 -601 6372 5092 6 1195 424 128 0 69 chr13 79993082 79993183 -40291129 - Lx2 LINE L1 -11 6986 6893 6 1195 3599 169 36 3 chr13 79993572 79994824 -40289488 - L1_Mur1 LINE L1 -4073 1813 569 6 1195 907 298 36 7 chr13 79994966 79995247 -40289065 - Lx9 LINE L1 -846 6798 6510 6 1195 467 335 0 0 chr13 79995273 79995431 -40288881 - Lx9 LINE L1 -1179 6465 6308 6 1195 21 0 0 0 chr13 79995444 79995465 -40288847 + AT_rich Low_complexity Low_complexity 1 21 0 6 1195 606 224 183 4 chr13 79995479 79995708 -40288604 + Lx9 LINE L1 7360 7629 -15 6 1195 3327 40 2 0 chr13 79995708 79996103 -40288209 + MTA_Mm LTR MaLR 1 396 0 6 1195 27 0 0 0 chr13 79996745 79996772 -40287540 + AT_rich Low_complexity Low_complexity 1 27 0 6 1195 324 0 0 0 chr13 79998058 79998094 -40286218 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6 1195 5162 176 86 29 chr13 79998102 80000000 -40284312 + L1_Mur1 LINE L1 3 2007 -3879 6 1195 812 64 0 53 chr13 80000000 80000132 -40284180 + L1_Mur1 LINE L1 2008 2132 -3754 1 1195 3587 108 40 2 chr13 80000132 80000725 -40283587 + L1_Mus3 LINE L1 6077 6638 0 2 1195 12439 114 21 5 chr13 80000727 80002393 -40281919 + L1_Mur1 LINE L1 1788 3478 -2408 3 1195 201 39 0 0 chr13 80002393 80002419 -40281893 + (CAAA)n Simple_repeat Simple_repeat 4 29 0 4 1195 12439 114 21 5 chr13 80002419 80002727 -40281585 + L1_Mur1 LINE L1 3479 3793 -2093 3 1195 262 289 44 11 chr13 80002728 80002819 -40281493 + ETnERV2-int LTR ERVK 271 364 -2950 5 1195 5391 131 71 10 chr13 80002852 80003810 -40280502 + ETnERV2-int LTR ERVK 1071 2086 -5320 5 1195 5537 133 22 28 chr13 80003834 80004857 -40279455 + ETnERV2-int LTR ERVK 1995 3448 -3958 5 1195 4024 181 67 52 chr13 80005101 80007148 -40277164 + ETnERV2-int LTR ERVK 2696 6422 -984 5 1195 392 111 0 49 chr13 80007242 80007323 -40276989 + RLTR45-int LTR ERVK 6009 6072 -1172 6 1195 1564 142 8 4 chr13 80007323 80007570 -40276742 + ETnERV3-int LTR ERVK 5529 5776 -32 7 1195 2311 175 137 4 chr13 80007589 80008065 -40276247 + RLTR13D6 LTR ERVK 1 539 -363 7 1195 481 95 27 0 chr13 80008065 80008139 -40276173 + ETnERV2-int LTR ERVK 7331 7406 0 5 1195 2397 127 20 15 chr13 80008139 80008546 -40275766 + RLTR9E LTR ERVK 1 409 0 5 1195 5918 123 9 8 chr13 80008803 80009715 -40274597 + Lx LINE L1 5742 6654 0 8 1195 1000 214 45 0 chr13 80009715 80009916 -40274396 + MTD LTR MaLR 197 406 -13 9 1195 22 56 0 0 chr13 80009942 80009978 -40274334 + AT_rich Low_complexity Low_complexity 1 36 0 1 1195 29 28 0 0 chr13 80010121 80010157 -40274155 + AT_rich Low_complexity Low_complexity 1 36 0 1 1195 21 0 0 0 chr13 80010178 80010199 -40274113 + AT_rich Low_complexity Low_complexity 1 21 0 1 1195 441 284 32 57 chr13 80010358 80010481 -40273831 - RSINE1 SINE B4 -37 128 9 1 1195 2514 98 27 5 chr13 80010713 80011084 -40273228 + L1_Mus2 LINE L1 6188 6566 0 1 1195 477 0 0 0 chr13 80011149 80011202 -40273110 + (TC)n Simple_repeat Simple_repeat 2 54 0 1 1195 576 259 151 12 chr13 80011203 80011375 -40272937 + ORR1C2 LTR MaLR 189 384 0 1 1195 558 287 16 0 chr13 80013120 80013249 -40271063 + RMER1B Other Other 593 723 -343 1 1195 26 30 0 0 chr13 80015029 80015062 -40269250 + AT_rich Low_complexity Low_complexity 1 33 0 1 1195 443 258 0 0 chr13 80015312 80015409 -40268903 + MTE2b LTR MaLR 3 99 -280 1 1195 2749 203 40 9 chr13 80015475 80015555 -40268757 - L1_Mur2 LINE L1 -3719 2158 2065 2 1195 357 24 0 0 chr13 80015555 80015597 -40268715 + (TGG)n Simple_repeat Simple_repeat 3 44 0 2 1195 2749 203 40 9 chr13 80015597 80016171 -40268141 - L1_Mur2 LINE L1 -3813 2064 1485 2 1195 582 286 77 26 chr13 80016362 80016750 -40267562 - L1MD LINE L1 -1232 4914 4507 2 1195 300 281 144 46 chr13 80016749 80016944 -40267368 + L1MA4 LINE L1 5731 5944 -356 2 1195 443 125 25 0 chr13 80017362 80017442 -40266870 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 2 1195 2422 136 3 0 chr13 80018521 80018910 -40265402 - L1_Mur2 LINE L1 -1239 4638 4249 2 1195 1699 204 45 95 chr13 80018922 80019090 -40265222 + L1_Mur3 LINE L1 2516 2647 -3233 2 1195 288 0 0 0 chr13 80019090 80019122 -40265190 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1195 1699 204 45 95 chr13 80019122 80019475 -40264837 + L1_Mur3 LINE L1 2648 3016 -2864 2 1195 2117 159 68 14 chr13 80019475 80019890 -40264422 + RLTR9B LTR ERVK 1 437 0 2 1195 1699 204 45 95 chr13 80019890 80019924 -40264388 + L1_Mur3 LINE L1 3017 3044 -2836 2 1195 6908 169 66 9 chr13 80019924 80021325 -40262987 + ORR1A2-int LTR MaLR 484 1963 0 2 1195 2042 124 15 39 chr13 80021325 80021660 -40262652 + ORR1A2 LTR MaLR 1 327 0 2 1195 5941 200 58 77 chr13 80021660 80021731 -40262581 + L1_Mur3 LINE L1 3082 3176 -2704 2 1195 342 0 0 0 chr13 80021731 80021769 -40262543 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 3 1195 5941 200 58 77 chr13 80021769 80022787 -40261525 + L1_Mur3 LINE L1 3177 4202 -1678 2 1195 229 89 22 22 chr13 80022787 80022833 -40261479 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1195 5941 200 58 77 chr13 80022833 80023328 -40260984 + L1_Mur3 LINE L1 4203 4633 -1247 2 1195 212 0 0 35 chr13 80023328 80023357 -40260955 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1195 5941 200 58 77 chr13 80023357 80023581 -40260731 + L1_Mur3 LINE L1 4634 4857 -1023 2 1195 611 309 31 28 chr13 80023645 80023968 -40260344 - RLTR15 LTR ERVK -22 337 14 3 1195 2734 215 61 40 chr13 80023986 80024752 -40259560 - MYSERV6-int LTR ERVK -5 8954 8173 3 1195 484 172 11 115 chr13 80024776 80024906 -40259406 + ORR1A4 LTR MaLR 1 148 -211 3 1195 3146 166 69 33 chr13 80024942 80025822 -40258490 + ORR1A4-int LTR MaLR 1001 1770 -193 3 1195 1131 166 51 75 chr13 80025822 80026076 -40258236 + ORR1A4 LTR MaLR 1 248 -81 3 1195 374 190 13 0 chr13 80026076 80026155 -40258157 - MYSERV-int LTR ERVK -1156 5394 5315 3 1195 473 308 45 25 chr13 80026158 80026358 -40257954 - RMER4A LTR ERVK -26 440 237 3 1195 3098 276 58 65 chr13 80026361 80027709 -40256603 - MYSERV-int LTR ERVK -1437 5113 3776 3 1195 2518 102 5 8 chr13 80028739 80029113 -40255199 - L1_Mus2 LINE L1 -1 6565 6193 3 1195 3969 75 0 2 chr13 80029113 80029630 -40254682 + L1_Mus2 LINE L1 5702 6218 -348 3 1195 371 270 51 91 chr13 80029675 80029928 -40254384 - RLTR15 LTR ERVK -45 314 72 3 1195 893 262 54 106 chr13 80029966 80030552 -40253760 - BGLII_B LTR ERVK -40 513 63 3 1195 51 79 0 0 chr13 80030605 80030719 -40253593 + AT_rich Low_complexity Low_complexity 1 114 0 4 1195 332 132 0 0 chr13 80030719 80030772 -40253540 - RLTR15 LTR ERVK -306 53 1 4 1195 311 233 0 0 chr13 80030823 80030896 -40253416 - Lx6 LINE L1 -1533 5927 5855 4 1195 255 244 22 44 chr13 80032553 80032643 -40251669 + RLTR19-int LTR ERVK 801 888 -5249 4 1195 7742 64 5 1 chr13 80032822 80034102 -40250210 - L1Md_F3 LINE L1 -14 6570 5288 4 1195 39777 25 1 6 chr13 80034096 80040298 -40244014 - L1Md_T LINE L1 -3 6579 410 4 1195 8314 60 3 0 chr13 80040298 80041368 -40242944 - L1_Mm LINE L1 -585 5298 4226 4 1195 22117 116 15 2 chr13 80041540 80042818 -40241494 - L1_Mus3 LINE L1 -3 6635 5346 4 1195 3063 11 43 0 chr13 80042818 80043170 -40241142 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1195 22117 149 14 5 chr13 80043170 80043874 -40240438 - L1_Mus3 LINE L1 -538 5345 4640 4 1195 186 43 0 0 chr13 80043874 80043897 -40240415 + (TTG)n Simple_repeat Simple_repeat 2 24 0 4 1195 22117 149 14 5 chr13 80043897 80046469 -40237843 - L1_Mus3 LINE L1 -1244 4639 2032 4 1195 346 207 0 35 chr13 80046599 80046684 -40237628 + RLTR19-int LTR ERVK 896 977 -5160 4 1195 317 264 22 52 chr13 80046925 80047061 -40237251 + RLTR19-int LTR ERVK 994 1125 -5012 4 1195 684 288 122 20 chr13 80047110 80047404 -40236908 + MTC-int LTR MaLR 798 1121 -137 5 1195 37 69 0 0 chr13 80047446 80047518 -40236794 + AT_rich Low_complexity Low_complexity 1 72 0 5 1195 4732 76 45 1 chr13 80047550 80048236 -40236076 + L1_Mus2 LINE L1 5530 6240 -326 5 1195 367 259 0 41 chr13 80048461 80048582 -40235730 + RLTR19-int LTR ERVK 1870 1985 -3537 4 1195 1373 167 105 62 chr13 80048586 80048892 -40235420 - ORR1A4 LTR MaLR -8 321 3 5 1195 2274 97 9 33 chr13 80048943 80049274 -40235038 - ORR1A2 LTR MaLR -4 323 1 5 1195 1200 111 0 0 chr13 80049287 80049467 -40234845 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1195 766 170 0 12 chr13 80049467 80049618 -40234694 + CT-rich Low_complexity Low_complexity 12 160 0 5 1195 288 0 0 0 chr13 80049618 80049650 -40234662 + (TTTCC)n Simple_repeat Simple_repeat 4 35 0 5 1195 1585 117 105 0 chr13 80049678 80049926 -40234386 - Lx3A LINE L1 -12 6969 6696 5 1195 299 55 309 0 chr13 80049926 80049981 -40234331 - Lx3_Mus LINE L1 -497 6512 6441 5 1195 573 122 9 9 chr13 80049983 80050091 -40234221 + RLTR19-int LTR ERVK 2020 2127 -3395 4 1195 664 265 48 59 chr13 80050084 80050357 -40233955 + RLTR19-int LTR ERVK 2337 2606 -3531 4 1195 440 239 33 0 chr13 80050361 80050453 -40233859 - L1_Mur3 LINE L1 -272 5608 5514 6 1195 262 78 59 0 chr13 80050455 80050506 -40233806 - L1Md_F3 LINE L1 0 6584 6531 6 1195 232 247 41 0 chr13 80050631 80050704 -40233608 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 6 1195 857 238 3 10 chr13 80050803 80051000 -40233312 + ORR1D1 LTR MaLR 136 374 0 6 1195 522 186 0 108 chr13 80051038 80051195 -40233117 - Lx2A LINE L1 -9 6999 6860 6 1195 2123 162 6 3 chr13 80051195 80051548 -40232764 + Lx2A LINE L1 6488 6841 -167 6 1195 2805 83 10 3 chr13 80052847 80053232 -40231080 + L1_Mus2 LINE L1 6179 6566 0 6 1195 1511 232 16 0 chr13 80053566 80053885 -40230427 - Lx4B LINE L1 -581 6477 6154 6 1195 320 0 0 0 chr13 80053885 80053925 -40230387 - B2_Mm2 SINE B2 -154 41 2 6 1195 600 326 26 0 chr13 80054157 80054347 -40229965 + B3 SINE B2 2 196 -20 6 1195 809 234 21 38 chr13 80054955 80055195 -40229117 - Lx5 LINE L1 -545 5332 5097 6 1195 6028 234 22 23 chr13 80055196 80056908 -40227404 + Lx5 LINE L1 5335 7047 -3 6 1195 225 0 0 0 chr13 80056996 80057021 -40227291 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 7 1195 22 0 0 0 chr13 80057138 80057160 -40227152 + AT_rich Low_complexity Low_complexity 1 22 0 7 1195 216 86 0 0 chr13 80057441 80057476 -40226836 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 7 1195 23 78 0 0 chr13 80057930 80057981 -40226331 + AT_rich Low_complexity Low_complexity 1 51 0 7 1195 472 268 188 23 chr13 80057985 80058241 -40226071 - Lx8 LINE L1 -5 7468 7171 7 1195 1643 222 92 3 chr13 80058251 80058630 -40225682 - MTC LTR MaLR -8 413 1 7 1195 438 287 32 60 chr13 80058634 80058819 -40225493 - Lx8 LINE L1 -304 7169 6990 7 1195 1685 255 122 25 chr13 80058814 80059562 -40224750 + Lx7 LINE L1 5367 6187 -1509 7 1195 1972 115 34 0 chr13 80059567 80059862 -40224450 + ORR1A2 LTR MaLR 23 327 0 7 1195 1387 247 157 36 chr13 80059864 80060237 -40224075 + Lx7 LINE L1 6265 6700 -996 7 1195 3012 52 5 42 chr13 80060237 80060640 -40223672 - RLTR10 LTR ERVK -2 388 1 7 1195 1387 247 157 36 chr13 80060640 80060712 -40223600 + Lx7 LINE L1 6701 6764 -932 7 1195 4134 170 48 12 chr13 80060718 80061058 -40223254 - L1_Mur2 LINE L1 -1696 4181 3846 6 1195 315 0 0 0 chr13 80061058 80061093 -40223219 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1195 4134 170 48 12 chr13 80061093 80061112 -40223200 - L1_Mur2 LINE L1 -2032 3845 3811 6 1195 2562 83 63 3 chr13 80061112 80061475 -40222837 - IAPEY_LTR LTR ERVK 0 385 1 8 1195 4134 170 48 12 chr13 80061475 80062001 -40222311 - L1_Mur2 LINE L1 -2067 3810 3265 6 1195 5569 156 30 48 chr13 80062048 80063100 -40221212 - Lx2A LINE L1 -9 6999 5966 8 1195 8936 161 18 46 chr13 80063101 80063450 -40220862 - L1_Mur2 LINE L1 -936 4941 4610 8 1195 644 147 112 0 chr13 80063450 80063566 -40220746 - B1_Mm SINE Alu -18 129 1 8 1195 8936 161 18 46 chr13 80063566 80063848 -40220464 - L1_Mur2 LINE L1 -1268 4609 4340 8 1195 1053 116 0 0 chr13 80063848 80063995 -40220317 - B1_Mus2 SINE Alu 0 147 1 8 1195 8936 161 18 46 chr13 80063995 80065098 -40219214 - L1_Mur2 LINE L1 -1538 4339 3247 8 1195 207 0 0 0 chr13 80065098 80065121 -40219191 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 8 1195 1016 67 7 0 chr13 80065123 80065258 -40219054 - B1_Mus1 SINE Alu -12 136 1 8 1195 8936 161 18 46 chr13 80065258 80065366 -40218946 - L1_Mur2 LINE L1 -2631 3246 3146 8 1195 617 25 13 0 chr13 80065599 80065678 -40218634 + (TC)n Simple_repeat Simple_repeat 2 81 0 8 1195 254 272 117 53 chr13 80065713 80065884 -40218428 + Lx7 LINE L1 7515 7696 0 8 1195 1118 75 0 7 chr13 80065915 80066063 -40218249 + B1_Mus2 SINE Alu 1 147 0 8 1195 195 42 0 0 chr13 80066063 80066087 -40218225 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1195 5390 33 0 23 chr13 80066314 80066986 -40217326 + L1Md_A LINE L1 5939 6582 0 9 1195 1644 139 57 0 chr13 80067055 80067407 -40216905 - L1_Mus4 LINE L1 -130 6524 6219 9 1195 23 33 0 0 chr13 80067819 80067849 -40216463 + AT_rich Low_complexity Low_complexity 1 30 0 9 1195 22 35 0 0 chr13 80067958 80067987 -40216325 + AT_rich Low_complexity Low_complexity 1 29 0 9 1195 24 0 0 0 chr13 80068120 80068144 -40216168 + AT_rich Low_complexity Low_complexity 1 24 0 9 1195 222 336 68 30 chr13 80069183 80069315 -40214997 - MIRc SINE MIR -111 157 21 9 1195 356 0 0 22 chr13 80069342 80069387 -40214925 + (TA)n Simple_repeat Simple_repeat 2 45 0 9 1195 1116 65 0 0 chr13 80069487 80069625 -40214687 - B1_Mus1 SINE Alu -10 138 1 9 1195 1243 265 36 0 chr13 80069723 80070029 -40214283 + ORR1C2 LTR MaLR 1 317 -67 9 1195 1767 253 159 72 chr13 80070746 80071996 -40212316 - L1_Rod LINE L1 -1142 4705 3347 1 1195 3094 271 81 11 chr13 80072082 80073142 -40211170 + Lx9 LINE L1 6072 7205 -439 1 1195 2487 272 87 34 chr13 80073489 80074988 -40209324 + RMER1B Other Other 16 1051 -15 1 1195 22 56 0 0 chr13 80075119 80075155 -40209157 + AT_rich Low_complexity Low_complexity 1 36 0 1 1195 495 16 0 0 chr13 80075342 80075404 -40208908 + L1_Mus2 LINE L1 6504 6565 -1 1 1195 22 56 0 0 chr13 80075865 80075901 -40208411 + AT_rich Low_complexity Low_complexity 1 36 0 1 1195 2663 19 12 0 chr13 80076098 80076418 -40207894 - IAPEY2_LTR LTR ERVK 0 357 34 1 1195 28 48 0 0 chr13 80076632 80076674 -40207638 + AT_rich Low_complexity Low_complexity 1 42 0 1 1195 288 0 0 0 chr13 80077307 80077339 -40206973 + (TA)n Simple_repeat Simple_repeat 2 33 0 1 1195 785 152 32 0 chr13 80077501 80077659 -40206653 - L1_Mur2 LINE L1 -2883 2994 2832 1 1195 2355 177 11 54 chr13 80077660 80078232 -40206080 + L1_Mur2 LINE L1 2926 3472 -2405 1 1195 1519 176 153 31 chr13 80078230 80078622 -40205690 + L1_Mur2 LINE L1 3867 4306 -1571 1 1195 4556 185 36 10 chr13 80078625 80079514 -40204798 + Lx4B LINE L1 6143 7054 -4 1 1195 24 0 0 0 chr13 80079526 80079550 -40204762 + AT_rich Low_complexity Low_complexity 1 24 0 1 1195 367 340 95 0 chr13 80080083 80080283 -40204029 + L1ME3A LINE L1 5745 5963 -210 1 1195 21 0 0 0 chr13 80080399 80080420 -40203892 + AT_rich Low_complexity Low_complexity 1 21 0 1 1195 2061 193 38 7 chr13 80082245 80082668 -40201644 - L1_Mur3 LINE L1 -183 5697 5262 1 1195 23 33 0 0 chr13 80082671 80082701 -40201611 + AT_rich Low_complexity Low_complexity 1 30 0 1 1195 21 0 0 0 chr13 80082806 80082827 -40201485 + AT_rich Low_complexity Low_complexity 1 21 0 1 1195 22 56 0 0 chr13 80082918 80082954 -40201358 + AT_rich Low_complexity Low_complexity 1 36 0 1 1195 3100 93 12 12 chr13 80083271 80083763 -40200549 - MusHAL1 LINE L1 -630 2082 1591 1 1195 3019 200 55 84 chr13 80083807 80084467 -40199845 - L1_Mur3 LINE L1 -643 5237 4600 1 1195 3442 69 4 2 chr13 80084467 80084919 -40199393 - L1_Mus2 LINE L1 -1 6565 6113 1 149 3019 200 55 84 chr13 80084919 80085171 -40199141 - L1_Mur3 LINE L1 -1281 4599 4352 1 1196 460 282 31 87 chr13 80085259 80085439 -40198873 + B3 SINE B2 2 195 0 1 1196 346 276 0 0 chr13 80085829 80085916 -40198396 - MTEa LTR MaLR 0 379 293 1 1196 720 310 34 30 chr13 80085924 80086222 -40198090 + MTE2a LTR MaLR 3 300 -79 1 1196 718 337 57 21 chr13 80086252 80086531 -40197781 - MTEa LTR MaLR -90 289 1 1 1196 904 137 17 69 chr13 80087041 80087081 -40197231 + RMER19C LTR ERVK 444 474 -137 1 1196 4840 44 0 0 chr13 80087081 80087668 -40196644 - L1Md_T LINE L1 0 6582 5996 1 1196 904 137 17 69 chr13 80087668 80087800 -40196512 + RMER19C LTR ERVK 475 607 -4 1 1196 415 303 133 29 chr13 80087808 80088087 -40196225 + Lx7 LINE L1 6993 7300 -396 1 1196 669 65 28 0 chr13 80088559 80088667 -40195645 + (GA)n Simple_repeat Simple_repeat 1 111 0 1 1196 225 0 0 0 chr13 80088669 80088694 -40195618 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1196 21 0 0 0 chr13 80088887 80088908 -40195404 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 204 67 0 0 chr13 80089331 80089361 -40194951 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1196 331 268 104 26 chr13 80091024 80091139 -40193173 + MTD LTR MaLR 1 124 -295 1 1196 23 0 0 0 chr13 80091449 80091472 -40192840 + AT_rich Low_complexity Low_complexity 1 23 0 1 1196 519 277 120 0 chr13 80091486 80091670 -40192642 + MTD LTR MaLR 214 419 0 1 1196 565 294 103 0 chr13 80091728 80092000 -40192312 + L1MA4 LINE L1 5393 5692 -608 1 1196 21003 148 13 17 chr13 80092020 80096721 -40187591 + L1_Mus3 LINE L1 1958 6633 -5 1 1196 409 268 30 80 chr13 80096743 80096942 -40187370 + L1MA4 LINE L1 5744 5932 -368 1 1196 25 31 0 0 chr13 80097449 80097481 -40186831 + AT_rich Low_complexity Low_complexity 1 32 0 1 1196 456 77 0 0 chr13 80097824 80097889 -40186423 + (CA)n Simple_repeat Simple_repeat 2 66 0 1 1196 501 17 0 0 chr13 80097898 80097956 -40186356 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1196 288 325 95 21 chr13 80098631 80099052 -40185260 - L1M3 LINE L1 -541 5759 5308 1 1196 30 0 0 0 chr13 80099599 80099629 -40184683 + AT_rich Low_complexity Low_complexity 1 30 0 1 1196 1568 32 27 0 chr13 80099729 80099916 -40184396 + B2_Mm1t SINE B2 2 193 0 1 1196 21 0 0 0 chr13 80099959 80099980 -40184332 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 21 0 0 0 chr13 80100263 80100284 -40184028 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 254 212 165 59 chr13 80100484 80100569 -40183743 + RLTR31A_Mm LTR ERVK 491 584 0 1 1196 24 0 0 0 chr13 80101014 80101038 -40183274 + AT_rich Low_complexity Low_complexity 1 24 0 1 1196 1359 241 144 38 chr13 80101078 80101506 -40182806 - RMER19C LTR ERVK 0 902 138 1 1196 22 0 0 0 chr13 80102800 80102822 -40181490 + AT_rich Low_complexity Low_complexity 1 22 0 1 1196 191 81 0 51 chr13 80103266 80103305 -40181007 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 1 1196 351 372 7 7 chr13 80103533 80103671 -40180641 - B4A SINE B4 -26 266 129 1 1196 23 33 0 0 chr13 80103825 80103855 -40180457 + AT_rich Low_complexity Low_complexity 1 30 0 1 1196 1164 312 50 21 chr13 80103864 80104339 -40179973 - Lx6 LINE L1 -27 7433 6945 1 1196 554 0 15 0 chr13 80104959 80105025 -40179287 + (TTTC)n Simple_repeat Simple_repeat 1 67 0 1 1196 1073 103 0 0 chr13 80105028 80105173 -40179139 - B1_Mm SINE Alu -2 145 1 1 1196 696 260 0 83 chr13 80105870 80106063 -40178249 + B3A SINE B2 6 182 -16 1 1196 225 196 0 0 chr13 80106063 80106109 -40178203 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1196 24 53 0 0 chr13 80106109 80106147 -40178165 + AT_rich Low_complexity Low_complexity 1 38 0 1 1196 20974 163 108 9 chr13 80106151 80110951 -40173361 + L1VL2 LINE L1 479 5761 -122 1 1196 2979 138 8 8 chr13 80110954 80111444 -40172868 + Lx LINE L1 6161 6650 -4 1 1196 741 172 19 26 chr13 80111567 80111722 -40172590 - RMER3D-int LTR ERVK -1470 1372 1219 1 1196 413 81 0 16 chr13 80111722 80111785 -40172527 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 1 1196 672 214 4 95 chr13 80111785 80112017 -40172295 - RMER3D-int LTR ERVK -1618 1224 1014 1 1196 724 233 54 58 chr13 80112170 80112430 -40171882 - RMER3D-int LTR ERVK -2483 359 101 1 1196 4902 55 18 7 chr13 80112430 80113047 -40171265 + RLTR1 LTR ERV1 1 624 0 1 1196 303 196 0 0 chr13 80113382 80113433 -40170879 - L1_Mm LINE L1 -286 5597 5547 1 1196 1674 74 0 4 chr13 80113433 80113665 -40170647 - L1_Mus2 LINE L1 -520 5363 5133 1 1196 6914 101 8 9 chr13 80113659 80114881 -40169431 + L1_Mus2 LINE L1 5346 6566 0 1 1196 21 0 0 0 chr13 80116579 80116600 -40167712 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 21 0 0 0 chr13 80116678 80116699 -40167613 + AT_rich Low_complexity Low_complexity 1 21 0 1 1196 1606 229 106 16 chr13 80116730 80117107 -40167205 + Lx5 LINE L1 6383 6793 -257 1 1196 2134 66 112 0 chr13 80117109 80117413 -40166899 + ORR1A1 LTR MaLR 1 338 -8 1 1196 908 282 57 0 chr13 80117418 80117645 -40166667 + Lx5 LINE L1 6792 7031 -19 1 1196 303 28 0 0 chr13 80117646 80117682 -40166630 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 1 1196 2110 248 130 17 chr13 80117761 80118510 -40165802 - Lx6 LINE L1 -311 7149 6315 1 1196 285 29 0 0 chr13 80118627 80118661 -40165651 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1196 698 116 14 0 chr13 80118661 80118807 -40165505 + (CAGAGA)n Simple_repeat Simple_repeat 2 149 0 1 1196 1051 196 15 0 chr13 80120209 80120408 -40163904 - URR1A DNA MER1_type 0 226 25 1 1196 1042 90 14 0 chr13 80120880 80121025 -40163287 + B1_Mus1 SINE Alu 2 148 0 1 1196 3257 41 0 0 chr13 80121378 80121765 -40162547 - L1Md_F2 LINE L1 -12 6570 6184 1 1196 23 78 0 0 chr13 80122400 80122451 -40161861 + AT_rich Low_complexity Low_complexity 1 51 0 1 1196 270 305 0 0 chr13 80122484 80122602 -40161710 + T-rich Low_complexity Low_complexity 1 118 0 1 1196 3853 100 40 0 chr13 80123132 80123680 -40160632 - L1_Mus3 LINE L1 -3 6635 6066 1 1196 1347 107 5 0 chr13 80123684 80123881 -40160431 + L1_Mus3 LINE L1 5860 6057 -579 1 1196 373 346 8 0 chr13 80124359 80124489 -40159823 - Lx9 LINE L1 -214 7430 7300 1 1196 613 359 96 19 chr13 80124514 80124838 -40159474 - Lx9 LINE L1 -925 6719 6371 1 1196 417 336 9 0 chr13 80124924 80125037 -40159275 + ID_B1 SINE B4 90 203 -21 1 1196 285 309 92 38 chr13 80125037 80125055 -40159257 + B1F1 SINE Alu 9 146 -3 1 1196 531 0 0 0 chr13 80125297 80125356 -40158956 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1196 252 0 0 0 chr13 80125356 80125383 -40158929 + (GA)n Simple_repeat Simple_repeat 2 29 0 1 1196 11265 106 8 10 chr13 80125893 80128257 -40156055 - L1_Mus2 LINE L1 0 6566 4206 1 1196 378 42 0 0 chr13 80128257 80128305 -40156007 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1196 423 0 0 0 chr13 80128308 80128355 -40155957 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 1 1196 11265 127 9 6 chr13 80128355 80128497 -40155815 - L1_Mus2 LINE L1 -1678 4205 4064 1 1196 23555 118 12 2 chr13 80128494 80132919 -40151393 + L1_Mus2 LINE L1 2094 6566 0 1 1196 668 283 5 91 chr13 80132935 80133240 -40151072 - L1VL1 LINE L1 -5940 478 25 1 1196 21 36 0 0 chr13 80133598 80133626 -40150686 + AT_rich Low_complexity Low_complexity 1 28 0 1 1196 248 227 5 91 chr13 80133831 80133948 -40150364 - L1ME1 LINE L1 -442 6002 5894 1 1196 1250 218 97 7 chr13 80134217 80134527 -40149785 + ORR1B1 LTR MaLR 1 338 -56 1 1196 333 273 190 0 chr13 80134603 80134808 -40149504 - Lx9 LINE L1 -20 7624 7381 1 1196 22 0 0 0 chr13 80136043 80136065 -40148247 + AT_rich Low_complexity Low_complexity 1 22 0 1 1196 34 0 0 0 chr13 80136233 80136267 -40148045 + AT_rich Low_complexity Low_complexity 1 34 0 1 1196 23 33 0 0 chr13 80140867 80140897 -40143415 + AT_rich Low_complexity Low_complexity 1 30 0 1 1196 226 337 90 0 chr13 80142739 80142828 -40141484 + L2 LINE L2 1956 2052 -1367 1 1196 569 156 0 11 chr13 80144287 80144378 -40139934 - RLTR20B3 LTR ERVK 0 577 488 1 1196 546 113 0 0 chr13 80144378 80144475 -40139837 + (TC)n Simple_repeat Simple_repeat 1 97 0 1 1196 2728 194 4 11 chr13 80144476 80144954 -40139358 - RLTR20B3 LTR ERVK -102 475 1 1 1196 342 143 0 0 chr13 80145549 80145612 -40138700 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1 1196 2117 91 19 0 chr13 80145616 80145935 -40138377 - MusHAL1 LINE L1 -730 1982 1658 1 1196 366 276 144 22 chr13 80145935 80146231 -40138081 + MTD LTR MaLR 38 360 -59 1 1196 330 87 0 0 chr13 80146247 80146293 -40138019 + (GGA)n Simple_repeat Simple_repeat 3 48 0 1 1196 314 260 20 10 chr13 80146293 80146318 -40137994 + ID_B1 SINE B4 122 147 -77 2 1196 1038 148 0 0 chr13 80146318 80146494 -40137818 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 2 1196 314 260 20 10 chr13 80146494 80146569 -40137743 + ID_B1 SINE B4 148 223 -1 2 1196 22 56 0 0 chr13 80146613 80146649 -40137663 + AT_rich Low_complexity Low_complexity 1 36 0 2 1196 579 329 21 0 chr13 80146670 80146810 -40137502 - RSINE1 SINE B4 -20 145 3 2 1196 22622 111 12 78 chr13 80147929 80149980 -40134332 + Lx6 LINE L1 943 3000 -2886 2 1196 4035 134 27 21 chr13 80149980 80150641 -40133671 + L1_Mus4 LINE L1 5972 6636 0 2 1196 759 75 0 0 chr13 80150645 80150751 -40133561 + B1_Mm SINE Alu 2 107 -40 2 1196 22622 120 15 97 chr13 80150751 80153300 -40131012 + Lx6 LINE L1 3005 5270 -616 2 1196 7374 123 26 8 chr13 80153300 80153441 -40130871 + Lx3A LINE L1 5766 5906 -1075 2 1196 1098 90 0 0 chr13 80153441 80153597 -40130715 + (GGGAGA)n Simple_repeat Simple_repeat 5 160 0 2 1196 7374 123 26 8 chr13 80153597 80154649 -40129663 + Lx3A LINE L1 5907 6980 -1 2 1196 22622 236 41 84 chr13 80154649 80155825 -40128487 + Lx6 LINE L1 5263 6340 -710 2 1196 1159 328 52 38 chr13 80155841 80156374 -40127938 + Lx6 LINE L1 6506 7046 -4 2 1196 2325 64 0 68 chr13 80157065 80157401 -40126911 - L1Md_F2 LINE L1 -18 6564 6252 2 1196 681 295 80 25 chr13 80157415 80157940 -40126372 - L1M3 LINE L1 -1430 4710 4157 2 1196 381 307 47 14 chr13 80157984 80158281 -40126031 - L1M3 LINE L1 -2079 4064 3758 2 1196 413 360 52 0 chr13 80159000 80159136 -40125176 + B4A SINE B4 75 217 -75 2 1196 480 128 0 0 chr13 80159167 80159245 -40125067 + (TA)n Simple_repeat Simple_repeat 2 79 0 2 1196 435 174 25 25 chr13 80159247 80159365 -40124947 + Lx9 LINE L1 7520 7637 -7 2 1196 442 351 43 62 chr13 80159386 80159662 -40124650 + B4A SINE B4 2 272 -20 2 1196 205 438 0 0 chr13 80159808 80159904 -40124408 + (CACG)n Simple_repeat Simple_repeat 4 99 0 2 1196 24 53 0 0 chr13 80159912 80159950 -40124362 + AT_rich Low_complexity Low_complexity 1 38 0 2 1196 348 83 0 0 chr13 80160261 80160309 -40124003 + (TA)n Simple_repeat Simple_repeat 2 49 0 2 1196 238 286 50 31 chr13 80160363 80160522 -40123790 + L1M LINE L1 5254 5415 -747 2 1196 3982 202 28 37 chr13 80160594 80161520 -40122792 + Lx2B LINE L1 6007 6990 -10 2 1196 936 160 0 12 chr13 80161566 80161737 -40122575 - L1_Mur1 LINE L1 -612 5274 5106 2 1196 5596 145 61 2 chr13 80161729 80162768 -40121544 - L1_Mur1 LINE L1 -965 4921 3822 2 1196 2505 167 83 34 chr13 80162764 80163291 -40121021 + L1_Mur1 LINE L1 5253 5805 -81 2 1196 26502 34 0 0 chr13 80163286 80169172 -40115140 + L1Md_T LINE L1 1 5589 -297 2 1196 8896 8 0 2 chr13 80169172 80170170 -40114142 + L1Md_T LINE L1 5590 6585 0 2 1196 365 125 0 0 chr13 80170174 80170235 -40114077 + Lx3C LINE L1 5746 5836 -1140 2 1196 327 315 125 18 chr13 80170269 80170437 -40113875 + L1ME3 LINE L1 5705 5890 -272 2 1196 405 0 0 0 chr13 80170711 80170756 -40113556 + (GA)n Simple_repeat Simple_repeat 2 46 0 2 1196 234 0 0 0 chr13 80170958 80170984 -40113328 + (TA)n Simple_repeat Simple_repeat 1 26 0 2 1196 2799 146 84 2 chr13 80171216 80171690 -40112622 + Lx3A LINE L1 6462 6974 -7 2 1196 25 0 0 0 chr13 80172587 80172612 -40111700 + AT_rich Low_complexity Low_complexity 1 25 0 2 1196 22 35 0 0 chr13 80173601 80173630 -40110682 + AT_rich Low_complexity Low_complexity 1 29 0 2 1196 23 0 0 0 chr13 80174064 80174087 -40110225 + AT_rich Low_complexity Low_complexity 1 23 0 2 1196 306 361 9 0 chr13 80174091 80174199 -40110113 + Lx9 LINE L1 6486 6594 -1050 2 1196 403 267 0 0 chr13 80174214 80174300 -40110012 + Lx9 LINE L1 6765 6850 -794 2 1196 2258 215 61 94 chr13 80174305 80174941 -40109371 + RMER20B LTR ERVK 11 625 -2 2 1196 854 316 42 28 chr13 80174942 80175369 -40108943 + Lx9 LINE L1 6843 7275 -369 2 1196 1278 256 15 24 chr13 80175363 80175691 -40108621 + Lx7 LINE L1 6542 6866 -830 2 1196 225 304 0 0 chr13 80175797 80175853 -40108459 + Lx9 LINE L1 6643 6698 -946 2 1196 21 0 0 0 chr13 80176278 80176299 -40108013 + AT_rich Low_complexity Low_complexity 1 21 0 2 1196 249 33 0 0 chr13 80176587 80176617 -40107695 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1196 366 23 0 0 chr13 80176617 80176659 -40107653 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1196 306 129 0 0 chr13 80176659 80176721 -40107591 + (CCA)n Simple_repeat Simple_repeat 1 62 0 2 1196 2852 70 0 0 chr13 80176884 80177258 -40107054 - L1Md_Gf LINE L1 -560 5326 4953 2 1196 22125 78 2 5 chr13 80177254 80181146 -40103166 - L1Md_Gf LINE L1 -1645 4241 265 2 1196 577 371 95 15 chr13 80181150 80181476 -40102836 + MTE-int LTR MaLR 813 1164 -416 2 1196 180 0 0 0 chr13 80181555 80181575 -40102737 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 2 1196 342 279 81 29 chr13 80181575 80181827 -40102485 + L1MD LINE L1 5293 5559 -2436 2 1196 924 301 60 12 chr13 80181876 80182212 -40102100 + MTD LTR MaLR 63 414 -5 2 1196 419 338 18 5 chr13 80182216 80182436 -40101876 + L1M2 LINE L1 5561 5783 -508 2 1196 219 146 0 0 chr13 80182652 80182693 -40101619 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1196 363 60 0 0 chr13 80182703 80182753 -40101559 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1196 1595 136 35 0 chr13 80184377 80184635 -40099677 + Lx LINE L1 6382 6648 -6 2 1196 21 82 0 0 chr13 80184709 80184758 -40099554 + AT_rich Low_complexity Low_complexity 1 49 0 2 1196 407 19 19 0 chr13 80185402 80185454 -40098858 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1196 306 0 0 0 chr13 80185721 80185755 -40098557 + (GA)n Simple_repeat Simple_repeat 1 34 0 2 1196 432 0 0 0 chr13 80185755 80185803 -40098509 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 1196 333 0 0 0 chr13 80185803 80185839 -40098473 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1196 262 43 0 60 chr13 80186867 80186917 -40097395 + (TTTTTA)n Simple_repeat Simple_repeat 2 48 0 2 1196 465 205 0 0 chr13 80188230 80188347 -40095965 + (CA)n Simple_repeat Simple_repeat 2 118 0 2 1196 34827 48 25 15 chr13 80188665 80193217 -40091095 + L1Md_F LINE L1 300 4920 -963 2 1196 240 167 46 77 chr13 80193217 80193282 -40091030 - RMER20A LTR ERVK -268 248 186 2 1196 34827 48 25 15 chr13 80193282 80193940 -40090372 + L1Md_F LINE L1 4921 5590 -293 2 1196 8034 52 0 1 chr13 80193941 80194933 -40089379 + L1Md_T LINE L1 5591 6581 -1 2 1196 653 187 8 47 chr13 80195547 80195676 -40088636 - B1_Mur3 SINE Alu -21 128 5 2 1196 228 35 0 0 chr13 80199198 80199227 -40085085 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1196 213 39 0 0 chr13 80199919 80199945 -40084367 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2 1196 24 0 0 0 chr13 80200273 80200297 -40084015 + AT_rich Low_complexity Low_complexity 1 24 0 2 1196 272 48 0 23 chr13 80200360 80200403 -40083909 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 2 1196 342 280 72 54 chr13 80200553 80200803 -40083509 - MIR SINE MIR 0 268 2 2 1196 227 358 27 13 chr13 80201744 80201894 -40082418 - L1MA6 LINE L1 -243 6057 5906 2 1196 27 49 0 0 chr13 80202564 80202605 -40081707 + AT_rich Low_complexity Low_complexity 1 41 0 2 1196 262 228 35 0 chr13 80203354 80203411 -40080901 - MTE2a LTR MaLR -316 63 5 2 1196 6061 167 40 81 chr13 80203411 80203985 -40080327 + L1_Mur2 LINE L1 1557 2055 -3822 2 1196 261 0 0 0 chr13 80203985 80204014 -40080298 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1196 6061 167 40 81 chr13 80204014 80204947 -40079365 + L1_Mur2 LINE L1 2056 3003 -2874 2 1196 251 212 0 233 chr13 80204958 80205066 -40079246 + L1VL1 LINE L1 28 112 -6310 2 1196 1905 91 59 233 chr13 80205066 80205641 -40078671 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1196 251 212 0 233 chr13 80205641 80205661 -40078651 + L1VL1 LINE L1 113 126 -6296 2 1196 243 0 0 0 chr13 80205661 80205688 -40078624 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1196 305 314 23 18 chr13 80205748 80205889 -40078423 + L1VL1 LINE L1 2 276 -6146 2 1196 28946 125 8 40 chr13 80205980 80208716 -40075596 + L1_Mus1 LINE L1 725 3476 -2407 2 1196 324 0 0 0 chr13 80208716 80208752 -40075560 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 2 1196 28946 114 9 47 chr13 80208752 80210829 -40073483 + L1_Mus1 LINE L1 3477 5584 -299 2 1196 8498 31 0 0 chr13 80210829 80211825 -40072487 + L1Md_A LINE L1 5587 6582 0 2 1196 28946 96 3 11 chr13 80211825 80213031 -40071281 + L1_Mus1 LINE L1 5585 6566 -1 2 1196 7035 105 1 3 chr13 80213032 80214316 -40069996 + L1_Mus1 LINE L1 5291 6654 0 2 1196 290 127 0 16 chr13 80214317 80214381 -40069931 + L1_Mur2 LINE L1 2991 3053 -2824 2 149 14426 177 173 11 chr13 80214624 80219789 -40064523 + Lx2B LINE L1 933 6997 -3 2 1197 708 114 35 28 chr13 80219809 80219953 -40064359 + L1_Mur2 LINE L1 3090 3234 -2643 2 1197 3802 197 89 46 chr13 80219960 80220784 -40063528 + Lx4B LINE L1 6077 6921 -137 2 1197 450 0 0 0 chr13 80220784 80220834 -40063478 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1197 762 99 0 0 chr13 80220834 80220964 -40063348 + (GA)n Simple_repeat Simple_repeat 1 131 0 2 1197 3802 197 89 46 chr13 80220964 80221079 -40063233 + Lx4B LINE L1 6922 7057 -1 2 1197 23 0 0 0 chr13 80222088 80222111 -40062201 + AT_rich Low_complexity Low_complexity 1 23 0 2 1197 21 0 0 0 chr13 80222464 80222485 -40061827 + AT_rich Low_complexity Low_complexity 1 21 0 2 1197 39 22 0 0 chr13 80223435 80223481 -40060831 + AT_rich Low_complexity Low_complexity 1 46 0 2 1197 1430 292 132 40 chr13 80223582 80224287 -40060025 - Charlie8 DNA MER1_type -630 1798 1029 2 1197 614 304 31 31 chr13 80224328 80224552 -40059760 + MLT1C LTR MaLR 1 224 -243 2 1197 21 36 0 0 chr13 80224950 80224978 -40059334 + AT_rich Low_complexity Low_complexity 1 28 0 2 1197 378 188 0 0 chr13 80225520 80225584 -40058728 + ORR1B1-int LTR MaLR 1307 1370 0 2 1197 1690 245 37 13 chr13 80225584 80225960 -40058352 + ORR1B1 LTR MaLR 1 385 -9 2 1197 616 291 42 66 chr13 80226116 80226666 -40057646 + Lx7 LINE L1 876 1421 -4459 2 1197 8595 126 14 13 chr13 80226662 80228096 -40056216 + Lx3A LINE L1 5549 6976 -5 2 1197 796 252 65 26 chr13 80228222 80228528 -40055784 + Lx7 LINE L1 1604 1921 -3959 2 1197 2611 302 48 108 chr13 80228548 80229009 -40055303 + Lx7 LINE L1 3832 4287 -1590 2 1197 321 117 0 0 chr13 80229009 80229069 -40055243 + (CA)n Simple_repeat Simple_repeat 2 61 0 2 1197 3391 285 51 51 chr13 80229069 80232090 -40052222 + Lx7 LINE L1 4288 7305 -391 2 1197 234 0 0 0 chr13 80232158 80232184 -40052128 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 1197 1561 171 73 19 chr13 80232184 80232500 -40051812 - RMER6C LTR ERVK -357 333 1 2 1197 1090 34 14 0 chr13 80232618 80232765 -40051547 + (TAGA)n Simple_repeat Simple_repeat 1 149 0 2 1197 3509 170 75 122 chr13 80233128 80233593 -40050719 + L1VL2 LINE L1 126 626 -5709 2 1197 254 274 18 97 chr13 80233593 80233630 -40050682 + ID_B1 SINE B4 120 223 -1 2 1197 421 149 13 26 chr13 80233630 80233706 -40050606 + B1_Mm SINE Alu 72 146 -1 2 1197 801 0 0 0 chr13 80233715 80233804 -40050508 + (GAA)n Simple_repeat Simple_repeat 3 91 0 2 1197 3509 132 35 56 chr13 80233804 80234335 -40049977 + L1VL2 LINE L1 638 1198 -2417 2 1197 11683 167 7 20 chr13 80234346 80236245 -40048067 + L1_Mur2 LINE L1 3335 5229 -648 2 1197 1985 0 0 0 chr13 80236245 80236468 -40047844 + L1Md_A LINE L1 6360 6582 0 2 1197 11683 167 7 20 chr13 80236468 80236772 -40047540 + L1_Mur2 LINE L1 5230 5508 -369 2 1197 342 0 0 0 chr13 80237684 80237722 -40046590 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 3 1197 2131 276 18 27 chr13 80239050 80239598 -40044714 - Lx6 LINE L1 -4 7456 6914 3 1197 325 286 0 0 chr13 80239613 80239690 -40044622 - Lx7 LINE L1 -1023 6673 6597 3 1197 244 217 0 0 chr13 80239694 80239740 -40044572 - Lx6 LINE L1 -1288 6172 6127 3 1197 2191 303 53 22 chr13 80240473 80240561 -40043751 + Lx9 LINE L1 6205 6308 -1336 3 1197 195 42 0 0 chr13 80240561 80240585 -40043727 + (TCTA)n Simple_repeat Simple_repeat 2 25 0 3 1197 2191 303 53 22 chr13 80240585 80241357 -40042955 + Lx9 LINE L1 6309 7091 -553 3 1197 22 0 0 0 chr13 80241757 80241779 -40042533 + AT_rich Low_complexity Low_complexity 1 22 0 3 1197 251 172 0 59 chr13 80241856 80241924 -40042388 + T-rich Low_complexity Low_complexity 2 65 0 3 1197 410 299 59 59 chr13 80243690 80244010 -40040302 + IAPEz-int LTR ERVK 2966 3285 -3196 3 1197 1874 148 33 93 chr13 80244580 80244945 -40039367 + RLTR26 LTR ERVK 300 642 0 3 1197 1164 133 65 140 chr13 80245719 80245998 -40038314 - Lx2 LINE L1 0 6997 6740 3 1197 3044 162 115 113 chr13 80246228 80247057 -40037255 - RMER17B LTR ERVK -76 882 1 3 1197 279 228 272 0 chr13 80247057 80247149 -40037163 + Lx9 LINE L1 7316 7432 -212 3 1197 213 391 22 0 chr13 80247272 80247364 -40036948 + PB1D7 SINE Alu 7 100 -20 3 1197 22 0 0 0 chr13 80247619 80247641 -40036671 + AT_rich Low_complexity Low_complexity 1 22 0 3 1197 198 194 0 0 chr13 80248021 80248083 -40036229 + (TCTG)n Simple_repeat Simple_repeat 2 63 0 3 1197 201 163 0 0 chr13 80248127 80248176 -40036136 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1197 21 36 0 0 chr13 80248206 80248234 -40036078 + AT_rich Low_complexity Low_complexity 1 28 0 3 1197 1216 61 0 6 chr13 80248391 80248555 -40035757 - L1Md_F2 LINE L1 -12 6570 6408 3 1197 718 329 91 23 chr13 80248817 80249259 -40035053 + Lx8 LINE L1 6423 6894 -579 3 1197 1116 266 86 48 chr13 80249325 80249849 -40034463 + L1_Rod LINE L1 80 623 -6549 3 1197 298 161 0 16 chr13 80249875 80249938 -40034374 - Lx2B LINE L1 -2 6995 6934 3 1197 1631 181 3 14 chr13 80249932 80250229 -40034083 - Lx2B LINE L1 -201 6799 6506 3 1197 2452 166 56 5 chr13 80250235 80250678 -40033634 - L1_Mur1 LINE L1 -9 5877 5412 3 1197 951 183 24 80 chr13 80250665 80250915 -40033397 + L1_Mur2 LINE L1 3843 4078 -1799 3 1197 228 294 68 34 chr13 80250949 80250966 -40033346 + B4 SINE B4 70 156 -132 3 1197 415 164 0 0 chr13 80250966 80251033 -40033279 + 4.5SRNA scRNA scRNA 1 67 -27 3 1197 26 74 0 0 chr13 80251049 80251103 -40033209 + AT_rich Low_complexity Low_complexity 1 54 0 3 1197 6093 178 60 6 chr13 80251109 80251409 -40032903 - L1_Mur2 LINE L1 -312 5565 5253 3 1197 606 14 0 0 chr13 80251409 80251480 -40032832 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1197 545 94 0 12 chr13 80251480 80251565 -40032747 + (TA)n Simple_repeat Simple_repeat 1 85 0 3 1197 6093 178 60 6 chr13 80251565 80252520 -40031792 - L1_Mur2 LINE L1 -625 5252 4241 3 1197 509 137 0 0 chr13 80252520 80252611 -40031701 - L1_Mur2 LINE L1 -1830 4047 3963 3 1197 6354 220 40 15 chr13 80252611 80252864 -40031448 + Lx4B LINE L1 5595 5847 -1211 3 1197 1935 154 9 6 chr13 80252864 80253190 -40031122 + ORR1A2 LTR MaLR 1 327 0 3 1197 6354 220 40 15 chr13 80253190 80254023 -40030289 + Lx4B LINE L1 5848 6717 -341 3 1197 2145 111 22 3 chr13 80254023 80254340 -40029972 + ORR1A2 LTR MaLR 5 327 0 3 1197 6354 220 40 15 chr13 80254340 80254659 -40029653 + Lx4B LINE L1 6718 7037 -21 3 1197 563 122 20 0 chr13 80254663 80254761 -40029551 + (GAAA)n Simple_repeat Simple_repeat 1 100 0 3 1197 316 289 23 35 chr13 80254767 80254939 -40029373 + L1_Rod LINE L1 672 841 -6331 3 1197 26131 142 21 35 chr13 80254938 80261179 -40023133 + L1_Mus2 LINE L1 410 6563 -3 3 1197 12213 131 39 12 chr13 80261307 80263261 -40021051 + Lx3B LINE L1 1150 3159 -2727 3 1197 189 0 0 0 chr13 80263261 80263282 -40021030 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3 1197 12213 132 41 13 chr13 80263282 80263586 -40020726 + Lx3B LINE L1 3160 3471 -2415 3 1197 7186 140 37 45 chr13 80263586 80265610 -40018702 + Lx3B LINE L1 4947 6949 -24 3 1197 1255 226 19 89 chr13 80265610 80266106 -40018206 + RMER13B LTR ERVK 1 788 -120 3 1197 263 344 156 0 chr13 80266364 80266454 -40017858 + RSINE1 SINE B4 16 119 -46 3 1197 42 0 0 0 chr13 80266766 80266808 -40017504 + AT_rich Low_complexity Low_complexity 1 42 0 3 1197 192 77 0 0 chr13 80268050 80268076 -40016236 + (TATATG)n Simple_repeat Simple_repeat 5 30 0 3 1197 304 273 25 8 chr13 80268080 80268202 -40016110 + (TA)n Simple_repeat Simple_repeat 2 125 0 3 1197 270 0 0 0 chr13 80270105 80270135 -40014177 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1197 27 49 0 0 chr13 80270921 80270962 -40013350 + AT_rich Low_complexity Low_complexity 1 41 0 3 1197 1463 106 46 102 chr13 80271231 80271515 -40012797 + Lx3B LINE L1 6654 6921 -52 3 1197 582 54 0 0 chr13 80271522 80271596 -40012716 + (TAG)n Simple_repeat Simple_repeat 1 74 0 3 1197 440 317 29 106 chr13 80271637 80271845 -40012467 + B3A SINE B2 1 192 -6 3 1197 29 98 0 0 chr13 80271980 80272072 -40012240 + AT_rich Low_complexity Low_complexity 1 92 0 3 1197 32 43 0 0 chr13 80272369 80272415 -40011897 + AT_rich Low_complexity Low_complexity 1 46 0 3 1197 286 42 42 0 chr13 80272453 80272501 -40011811 + (TTATA)n Simple_repeat Simple_repeat 1 50 0 3 1197 728 306 60 15 chr13 80272611 80272880 -40011432 + RMER15-int LTR ERVL 696 976 -4023 3 1197 521 314 0 0 chr13 80272947 80273084 -40011228 + RMER15-int LTR ERVL 1080 1216 -3783 3 1197 243 0 0 0 chr13 80273730 80273757 -40010555 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 3 1197 431 176 61 61 chr13 80274005 80274186 -40010126 + Lx9 LINE L1 7464 7644 0 3 1197 1010 291 56 15 chr13 80274251 80274589 -40009723 + Lx6 LINE L1 7077 7428 -32 3 1197 268 411 39 33 chr13 80276173 80276354 -40007958 + B3A SINE B2 6 187 -11 3 1197 25 75 0 0 chr13 80276431 80276484 -40007828 + AT_rich Low_complexity Low_complexity 1 53 0 3 1197 29 0 0 0 chr13 80277072 80277101 -40007211 + AT_rich Low_complexity Low_complexity 1 29 0 3 1197 3759 141 16 96 chr13 80277365 80278124 -40006188 + L1VL1 LINE L1 193 890 -5532 3 1197 1791 178 6 4 chr13 80278124 80278502 -40005810 + RLTR33 LTR ERVK 215 634 -44 3 1197 24681 132 61 30 chr13 80278511 80282826 -40001486 + L1_Mus2 LINE L1 1105 5566 -317 3 1197 6753 32 15 4 chr13 80282826 80283639 -40000673 + L1Md_F3 LINE L1 5761 6582 -2 3 1197 24681 90 27 3 chr13 80283639 80284056 -40000256 + L1_Mus2 LINE L1 5567 5978 -588 3 1197 2187 142 8 3 chr13 80284056 80284423 -39999889 + L1_Mus2 LINE L1 6264 6632 -6 3 1197 4737 51 39 8 chr13 80284494 80285108 -39999204 - L1Md_F2 LINE L1 -2 6580 5948 3 1197 4768 35 0 5 chr13 80285108 80285741 -39998571 + L1Md_F2 LINE L1 5320 5949 -633 3 1197 233 29 29 0 chr13 80285813 80285847 -39998465 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1197 2255 287 115 8 chr13 80285901 80287154 -39997158 - Lx6 LINE L1 -14 7446 6060 3 1197 675 250 31 0 chr13 80287279 80287475 -39996837 - Lx5 LINE L1 0 7050 6849 3 1197 1870 161 72 0 chr13 80287472 80287845 -39996467 + MusHAL1 LINE L1 1409 1808 -904 3 1197 1926 209 54 102 chr13 80287822 80288394 -39995918 + L1VL2 LINE L1 207 763 -5595 3 1197 561 30 0 0 chr13 80288394 80288461 -39995851 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 3 1197 13749 112 35 25 chr13 80288461 80291040 -39993272 + L1VL2 LINE L1 764 3334 -281 3 1197 536 250 8 0 chr13 80291046 80291170 -39993142 + L1M2 LINE L1 3661 3785 -2358 3 1197 3343 176 10 15 chr13 80291172 80291767 -39992545 + Lx2B LINE L1 6404 6995 -5 3 1197 508 274 13 0 chr13 80292144 80292297 -39992015 + L1MC LINE L1 2694 2848 -3298 3 1197 2350 199 124 107 chr13 80292313 80292783 -39991529 - RMER6D LTR ERVK -4 716 285 3 1197 1379 240 63 86 chr13 80292783 80293293 -39991019 - RLTR19 LTR ERVK 0 499 2 3 1197 2350 199 124 107 chr13 80293293 80293526 -39990786 - RMER6D LTR ERVK -436 284 1 3 1197 280 257 80 43 chr13 80293625 80293812 -39990500 + L1MC LINE L1 2982 3175 -2971 3 1197 227 320 135 34 chr13 80294394 80294743 -39989569 + L1M6 LINE L1 900 1283 -5213 3 1197 21 0 0 0 chr13 80295389 80295410 -39988902 + AT_rich Low_complexity Low_complexity 1 21 0 3 1197 292 311 99 54 chr13 80295822 80296043 -39988269 - B4A SINE B4 -58 234 4 3 1197 3019 112 0 90 chr13 80296655 80297175 -39987137 + Lx2A LINE L1 6535 7007 -1 3 1197 182 128 0 25 chr13 80297232 80297272 -39987040 + T-rich Low_complexity Low_complexity 3 41 0 3 1197 583 223 144 5 chr13 80297578 80297772 -39986540 + Lx9 LINE L1 7411 7631 -13 3 1197 785 40 0 29 chr13 80297772 80297867 -39986445 + B1_Mm SINE Alu 46 139 -8 3 1197 188 35 35 0 chr13 80297867 80297896 -39986416 + (CAAAA)n Simple_repeat Simple_repeat 4 33 0 3 1197 489 103 0 0 chr13 80297923 80297991 -39986321 + U4 snRNA snRNA 1 68 -77 3 1197 316 333 59 52 chr13 80298916 80299052 -39985260 - RSINE1 SINE B4 -25 140 4 3 1197 495 306 28 0 chr13 80299062 80299242 -39985070 - Lx7 LINE L1 -1904 5792 5608 3 1197 234 260 0 0 chr13 80299301 80299351 -39984961 - Lx7 LINE L1 -2044 5652 5603 3 1197 460 255 266 4 chr13 80299548 80299796 -39984516 - Lx9 LINE L1 -1 7643 7331 3 1197 728 211 68 6 chr13 80299917 80300093 -39984219 + URR1A DNA MER1_type 8 194 -32 3 1197 2542 188 6 0 chr13 80300099 80300594 -39983718 + L1_Mur2 LINE L1 4937 5434 -443 3 1197 184 120 0 39 chr13 80301190 80301242 -39983070 + A-rich Low_complexity Low_complexity 5 54 0 3 1197 6696 131 29 5 chr13 80301242 80302465 -39981847 + Lx LINE L1 5399 6651 -3 3 1197 29 28 0 0 chr13 80302485 80302521 -39981791 + AT_rich Low_complexity Low_complexity 1 36 0 3 1197 289 283 90 10 chr13 80302606 80302706 -39981606 + MTE2b LTR MaLR 195 302 -77 3 1197 420 300 67 0 chr13 80303217 80303367 -39980945 - Lx9 LINE L1 -365 7279 7120 3 1197 275 271 89 64 chr13 80303472 80303672 -39980640 - L1M2 LINE L1 -410 5473 5280 3 1197 393 42 99 0 chr13 80303672 80303743 -39980569 + L1Md_F3 LINE L1 6506 6583 -1 3 1197 379 309 108 59 chr13 80303743 80304293 -39980019 - L1M2 LINE L1 -601 5279 4683 3 1197 11740 80 20 24 chr13 80304399 80306756 -39977556 - L1Md_F2 LINE L1 0 6582 4214 3 1197 8610 50 1 3 chr13 80306753 80308519 -39975793 - L1Md_F2 LINE L1 -12 6570 4809 3 1197 7216 103 16 0 chr13 80308516 80309602 -39974710 - L1Md_F2 LINE L1 -1900 3983 2881 3 1197 6420 57 6 1 chr13 80309602 80310422 -39973890 - L1Md_F3 LINE L1 -15 6569 5746 3 1197 1584 74 5 5 chr13 80310422 80310633 -39973679 - L1Md_F3 LINE L1 -716 5167 4956 3 1197 526 176 0 32 chr13 80310817 80310940 -39973372 + Lx2 LINE L1 6879 6997 0 3 1197 279 54 0 0 chr13 80312173 80312210 -39972102 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1197 405 0 0 0 chr13 80312210 80312254 -39972058 + (GA)n Simple_repeat Simple_repeat 1 45 0 3 1197 24 0 0 0 chr13 80312915 80312939 -39971373 + AT_rich Low_complexity Low_complexity 1 24 0 3 1197 486 0 0 0 chr13 80313064 80313118 -39971194 + (TA)n Simple_repeat Simple_repeat 1 54 0 3 1197 1135 127 0 0 chr13 80313404 80313570 -39970742 - L1_Mus1 LINE L1 -283 6284 6119 4 1197 964 61 8 0 chr13 80313573 80313705 -39970607 + L1_Mus1 LINE L1 6433 6565 -2 4 1197 222 340 0 20 chr13 80314366 80314468 -39969844 + (CATA)n Simple_repeat Simple_repeat 4 103 0 4 1197 225 180 15 103 chr13 80315051 80315119 -39969193 - Charlie25 DNA MER1_type -1889 635 574 4 1197 396 40 0 0 chr13 80315878 80315928 -39968384 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1197 370 49 16 16 chr13 80316048 80316110 -39968202 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 4 1197 8090 132 51 15 chr13 80316110 80317136 -39967176 - Lx3_Mus LINE L1 -22 6987 5961 4 1197 198 0 0 0 chr13 80317136 80317158 -39967154 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 4 1197 8090 124 9 9 chr13 80317158 80318174 -39966138 - Lx3_Mus LINE L1 -1049 5960 4894 4 1197 2406 99 6 3 chr13 80318168 80318523 -39965789 + L1_Mur1 LINE L1 4364 4719 -1167 4 1197 23 33 0 0 chr13 80320275 80320305 -39964007 + AT_rich Low_complexity Low_complexity 1 30 0 4 1197 351 0 0 0 chr13 80321120 80321159 -39963153 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1197 25 83 0 0 chr13 80321217 80321277 -39963035 + AT_rich Low_complexity Low_complexity 1 60 0 4 1197 1014 61 8 0 chr13 80321721 80321853 -39962459 + B1_Mm SINE Alu 1 133 -14 4 1197 540 0 0 0 chr13 80321854 80321914 -39962398 + (TA)n Simple_repeat Simple_repeat 2 61 0 4 1197 24 0 0 0 chr13 80323500 80323524 -39960788 + AT_rich Low_complexity Low_complexity 1 24 0 4 1197 230 130 0 182 chr13 80324623 80324689 -39959623 - MLT1F-int LTR MaLR -760 729 676 4 1197 700 321 127 23 chr13 80324837 80325947 -39958365 - L1MB1 LINE L1 -157 6011 4775 4 1197 237 65 0 0 chr13 80326493 80326524 -39957788 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1197 2643 241 56 27 chr13 80326619 80327366 -39956946 - Lx9 LINE L1 -361 7283 6515 4 1197 1102 232 80 16 chr13 80327339 80327702 -39956610 + Lx9 LINE L1 7258 7643 -1 4 1197 234 257 0 0 chr13 80328463 80328611 -39955701 + (TA)n Simple_repeat Simple_repeat 2 149 0 4 1197 735 302 56 26 chr13 80328674 80328905 -39955407 + ORR1D2 LTR MaLR 1 238 -132 4 1197 23 0 0 0 chr13 80329313 80329336 -39954976 + AT_rich Low_complexity Low_complexity 1 23 0 4 1197 4951 186 49 65 chr13 80329338 80329996 -39954316 - Lx2B LINE L1 -5 6995 6305 4 1197 932 88 73 0 chr13 80329996 80330133 -39954179 + B1_Mus1 SINE Alu 2 148 0 4 1197 4951 186 49 65 chr13 80330133 80331405 -39952907 - Lx2B LINE L1 -5 6304 4967 4 1197 236 299 0 13 chr13 80331919 80331997 -39952315 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 1197 3469 185 47 11 chr13 80331997 80332652 -39951660 + RLTR17 LTR ERVK 3 681 -11 4 1197 520 148 9 9 chr13 80332654 80332739 -39951573 + (TA)n Simple_repeat Simple_repeat 2 87 0 4 1197 270 0 0 0 chr13 80332739 80332769 -39951543 + (GA)n Simple_repeat Simple_repeat 2 31 0 4 1197 520 148 9 9 chr13 80332769 80332792 -39951520 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 1197 240 111 0 0 chr13 80332884 80332920 -39951392 + (CATATA)n Simple_repeat Simple_repeat 1 36 0 4 1197 201 234 21 0 chr13 80333030 80333077 -39951235 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1197 561 217 0 37 chr13 80333079 80333266 -39951046 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1197 348 77 0 0 chr13 80333298 80333350 -39950962 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1197 1592 167 49 40 chr13 80336564 80336913 -39947399 + RMER12 LTR ERVK 397 748 -574 4 1197 3383 76 4 9 chr13 80337064 80337515 -39946797 - L1_Mus1 LINE L1 -3 6564 6116 4 1197 240 235 0 0 chr13 80337521 80337589 -39946723 + GA-rich Low_complexity Low_complexity 2 69 0 4 1197 205 272 174 0 chr13 80337662 80337754 -39946558 + MIR SINE MIR 34 141 -121 4 1197 13279 178 160 59 chr13 80339040 80343190 -39941122 + Lx LINE L1 582 5301 -582 4 1197 8212 31 6 0 chr13 80343190 80344168 -39940144 + L1Md_F3 LINE L1 5587 6570 -14 4 1197 13279 181 189 72 chr13 80344168 80344272 -39940040 + Lx LINE L1 5302 5335 -548 4 1197 3276 80 2 26 chr13 80344272 80344732 -39939580 - L1_Mus1 LINE L1 0 6567 6119 4 1197 13279 137 60 15 chr13 80344732 80346014 -39938298 + Lx LINE L1 5336 6647 -7 4 1198 254 264 62 26 chr13 80347790 80348016 -39936296 - RMER17D LTR ERVK -443 446 213 4 1198 765 280 62 111 chr13 80348017 80348403 -39935909 + MTE2a LTR MaLR 13 379 0 4 1198 7305 95 1 15 chr13 80348691 80350446 -39933866 - L1_Mus2 LINE L1 0 6566 4838 4 1198 6486 119 29 37 chr13 80350440 80350845 -39933467 + L1_Mm LINE L1 3773 4187 -1696 4 1198 247 22 111 0 chr13 80350845 80350890 -39933422 + (ATATG)n Simple_repeat Simple_repeat 4 53 0 4 1198 225 0 0 0 chr13 80350890 80350915 -39933397 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 1198 6486 119 29 37 chr13 80350915 80351167 -39933145 + L1_Mm LINE L1 4188 4458 -1425 4 1198 3375 64 9 7 chr13 80351167 80351608 -39932704 + L1Md_F2 LINE L1 6127 6568 -14 4 1198 6486 119 29 37 chr13 80351608 80352049 -39932263 + L1_Mm LINE L1 4459 4863 -1020 4 1198 651 224 127 0 chr13 80352257 80352422 -39931890 + ORR1D1 LTR MaLR 167 352 -22 4 1198 190 316 58 48 chr13 80352457 80352560 -39931752 - L4 LINE RTE -675 1354 1251 4 1198 21 71 0 0 chr13 80352972 80353014 -39931298 + AT_rich Low_complexity Low_complexity 1 42 0 4 1198 281 262 13 78 chr13 80353148 80353301 -39931011 + (CATATA)n Simple_repeat Simple_repeat 1 143 0 4 1198 460 73 0 12 chr13 80353338 80353421 -39930891 - L1Md_F3 LINE L1 0 6584 6503 4 1198 1887 272 81 8 chr13 80353449 80354105 -39930207 - Lx9 LINE L1 -5 7639 6936 4 1198 540 252 15 0 chr13 80354106 80354241 -39930071 + Lx9 LINE L1 6790 6926 -718 4 1198 323 315 114 12 chr13 80354707 80354874 -39929438 - MLT1D LTR MaLR -148 357 174 4 1198 285 322 0 34 chr13 80355543 80355691 -39928621 + T-rich Low_complexity Low_complexity 2 144 0 4 1198 315 299 51 10 chr13 80356484 80356582 -39927730 - PB1D7 SINE Alu 0 120 19 4 1198 827 187 0 0 chr13 80356647 80356786 -39927526 + B1_Mus1 SINE Alu 2 140 -8 4 1198 21 0 0 0 chr13 80357035 80357056 -39927256 + AT_rich Low_complexity Low_complexity 1 21 0 4 1198 667 288 51 32 chr13 80357244 80357625 -39926687 + Lx2B LINE L1 6560 7041 -17 4 1198 1101 183 35 0 chr13 80357991 80358193 -39926119 - RMER6C LTR ERVK -12 678 470 4 1198 827 20 10 0 chr13 80358193 80358294 -39926018 + (TC)n Simple_repeat Simple_repeat 1 102 0 4 1198 1409 139 70 70 chr13 80358300 80358404 -39925908 - RMER6C LTR ERVK -389 301 209 4 1198 3575 157 64 6 chr13 80358404 80359058 -39925254 + RLTR17 LTR ERVK 1 692 0 4 1198 1409 139 70 70 chr13 80359058 80359254 -39925058 - RMER6C LTR ERVK -482 208 1 4 1198 975 104 14 27 chr13 80359755 80359767 -39924545 - B1_Mus2 SINE Alu 0 147 139 4 1198 216 0 0 0 chr13 80359767 80359791 -39924521 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1198 975 104 14 27 chr13 80359791 80359926 -39924386 - B1_Mus2 SINE Alu -9 138 2 4 1198 997 117 6 6 chr13 80360012 80360175 -39924137 + RMER17D2 LTR ERVK 647 809 0 4 1198 250 248 68 19 chr13 80360242 80360345 -39923967 - Lx6 LINE L1 -43 7417 7310 4 1198 418 331 80 43 chr13 80361743 80362043 -39922269 - L1MC1 LINE L1 -90 6243 5933 4 1198 426 20 0 0 chr13 80362067 80362118 -39922194 + (TTG)n Simple_repeat Simple_repeat 2 52 0 4 1198 1376 278 67 19 chr13 80362120 80362553 -39921759 - Lx6 LINE L1 -26 7434 6981 4 1198 300 291 34 11 chr13 80362550 80362724 -39921588 - L1MC1 LINE L1 -450 5894 5721 4 1198 261 0 0 0 chr13 80362801 80362830 -39921482 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1198 359 256 33 11 chr13 80362989 80363080 -39921232 - B1_Mur4 SINE Alu -1 149 57 4 1198 3860 193 65 89 chr13 80363090 80364000 -39920312 - RMER19B LTR ERVK -12 890 3 4 1198 468 333 43 5 chr13 80364085 80364269 -39920043 - L1MC1 LINE L1 -752 5581 5391 4 1198 253 284 38 56 chr13 80364291 80364409 -39919903 - L1MC1 LINE L1 -980 5166 5053 4 1198 219 69 0 0 chr13 80364409 80364438 -39919874 + (TAA)n Simple_repeat Simple_repeat 1 29 0 4 1198 253 284 38 56 chr13 80364438 80364532 -39919780 - L1MC1 LINE L1 -1094 5052 4958 4 1198 1083 96 0 0 chr13 80365398 80365544 -39918768 + B1_Mus1 SINE Alu 1 146 -2 4 1198 25 51 0 0 chr13 80365771 80365810 -39918502 + AT_rich Low_complexity Low_complexity 1 39 0 4 1198 17059 75 2 2 chr13 80365910 80368196 -39916116 + L1Md_F2 LINE L1 3300 5586 -297 4 1198 7262 73 9 5 chr13 80368197 80369177 -39915135 + L1Md_F2 LINE L1 5588 6571 -11 4 1198 679 336 19 14 chr13 80369246 80369460 -39914852 + B4A SINE B4 3 217 -75 4 1198 199 274 107 27 chr13 80375546 80375621 -39908691 + L3 LINE CR1 2161 2241 -2248 4 1198 231 36 0 0 chr13 80375636 80375664 -39908648 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1198 195 42 0 0 chr13 80377281 80377305 -39907007 + (CA)n Simple_repeat Simple_repeat 2 25 0 4 1198 477 0 0 0 chr13 80377305 80377357 -39906955 + (TC)n Simple_repeat Simple_repeat 1 53 0 4 1198 2117 237 148 56 chr13 80379019 80379544 -39904768 - Lx6 LINE L1 0 7460 6871 4 1198 617 63 0 10 chr13 80379544 80379640 -39904672 + (TG)n Simple_repeat Simple_repeat 1 95 0 4 1198 2117 237 148 56 chr13 80379640 80379790 -39904522 - Lx6 LINE L1 -590 6870 6723 4 1198 277 250 16 0 chr13 80379810 80379874 -39904438 - Lx6 LINE L1 -1293 6167 6103 4 1198 5232 205 39 18 chr13 80379873 80380122 -39904190 + L1_Mur3 LINE L1 4442 4690 -1190 4 1198 243 0 0 0 chr13 80380122 80380149 -39904163 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1198 5232 205 39 18 chr13 80380149 80380356 -39903956 + L1_Mur3 LINE L1 4691 4899 -981 4 1198 2381 168 69 24 chr13 80380356 80380893 -39903419 + RLTR31_Mm LTR ERVK 1 561 0 4 1198 5232 205 39 18 chr13 80380893 80381631 -39902681 + L1_Mur3 LINE L1 4900 5662 -218 4 1198 6179 188 55 16 chr13 80381615 80383404 -39900908 - L1VL4 LINE L1 -1177 2382 520 4 1198 23 101 0 0 chr13 80384114 80384193 -39900119 + AT_rich Low_complexity Low_complexity 1 79 0 4 1198 26293 106 12 10 chr13 80384482 80386302 -39898010 - L1_Mus2 LINE L1 -1 6565 4737 4 1198 234 0 0 0 chr13 80386302 80386328 -39897984 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1198 26293 136 12 42 chr13 80386328 80390592 -39893720 - L1_Mus2 LINE L1 -1147 4736 609 4 1198 385 312 23 15 chr13 80391637 80391767 -39892545 - MTEb LTR MaLR -152 227 97 4 1198 522 281 16 0 chr13 80391826 80391954 -39892358 + ORR1D1 LTR MaLR 3 132 -242 4 1198 212 59 29 0 chr13 80391960 80391994 -39892318 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1198 256 271 0 0 chr13 80392082 80392152 -39892160 + ORR1D1 LTR MaLR 301 370 0 4 1198 2500 280 72 31 chr13 80392152 80393376 -39890936 + ORR1D1-int LTR MaLR 1 1269 -240 4 1198 1409 216 48 58 chr13 80393451 80393829 -39890483 - ORR1D1 LTR MaLR 0 374 1 4 1198 650 236 75 48 chr13 80393829 80394056 -39890256 - ORR1D1-int LTR MaLR 0 1370 1138 4 1198 494 271 47 117 chr13 80394062 80394275 -39890037 - RLTR23 LTR ERV1 -7 423 226 4 1198 371 277 0 0 chr13 80394438 80394521 -39889791 - RLTR23 LTR ERV1 -340 90 8 4 1198 499 334 32 21 chr13 80394734 80395105 -39889207 - MMERGLN-int LTR ERV1 -266 4797 4527 4 1198 259 267 93 0 chr13 80395700 80395775 -39888537 + RLTR23 LTR ERV1 349 430 0 4 1198 909 149 0 0 chr13 80396609 80396770 -39887542 + (TC)n Simple_repeat Simple_repeat 2 162 0 4 1198 432 0 0 0 chr13 80396770 80396818 -39887494 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1198 850 213 116 68 chr13 80397367 80397676 -39886636 - RLTR22_Mur LTR ERVK 0 1848 1591 4 1198 3450 167 8 10 chr13 80397706 80398329 -39885983 + Lx LINE L1 6028 6649 -5 5 1198 3194 184 79 33 chr13 80398416 80398948 -39885364 - RLTR22_Mur LTR ERVK -1044 804 222 5 1198 1137 76 7 0 chr13 80398948 80399093 -39885219 + B1_Mm SINE Alu 2 147 0 5 1198 3194 184 79 33 chr13 80399093 80399328 -39884984 - RLTR22_Mur LTR ERVK -1627 221 1 5 1198 1147 316 72 66 chr13 80399518 80401426 -39882886 - MMERGLN-int LTR ERV1 -2321 5235 2296 4 1198 2423 170 65 20 chr13 80401517 80402027 -39882285 - RMER16 LTR ERVK 0 533 1 5 1198 14649 93 32 22 chr13 80402027 80404211 -39880101 - RMER16-int LTR ERVK 0 5406 3201 5 1198 515 188 10 19 chr13 80404211 80404314 -39879998 - RMER16 LTR ERVK -431 102 1 5 1198 795 332 32 50 chr13 80404319 80405067 -39879245 - MMERGLN-int LTR ERV1 -4324 3282 2523 4 1198 2167 178 78 19 chr13 80405198 80405674 -39878638 - Lx3C LINE L1 -2 6974 6471 5 1198 548 348 58 27 chr13 80405714 80406124 -39878188 - MMERGLN-int LTR ERV1 -2456 2234 1812 4 1198 662 337 67 41 chr13 80406265 80406893 -39877419 - RLTR6-int LTR ERV1 -5843 1935 1292 5 1198 2112 50 0 0 chr13 80407575 80407879 -39876433 + L1Md_T LINE L1 6322 6582 0 5 1198 827 274 66 104 chr13 80408256 80408696 -39875616 - RLTR23 LTR ERV1 0 430 8 5 1198 2252 259 79 35 chr13 80408718 80409430 -39874882 - ORR1D-int LTR MaLR -228 1142 400 5 1198 320 94 0 19 chr13 80409462 80409516 -39874796 + (TATG)n Simple_repeat Simple_repeat 4 56 0 5 1198 426 39 0 0 chr13 80410070 80410122 -39874190 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1198 361 285 40 0 chr13 80410613 80410764 -39873548 + Charlie5 DNA MER1_type 2244 2400 -224 5 1198 32 26 0 0 chr13 80410857 80410896 -39873416 + AT_rich Low_complexity Low_complexity 1 39 0 5 1198 1026 90 0 0 chr13 80411151 80411295 -39873017 - L1_Mus2 LINE L1 0 6566 6423 5 1198 370 349 39 22 chr13 80411391 80411570 -39872742 + B4A SINE B4 2 183 -109 5 1198 21 0 0 0 chr13 80413053 80413074 -39871238 + AT_rich Low_complexity Low_complexity 1 21 0 5 1198 23 54 0 0 chr13 80413105 80413142 -39871170 + AT_rich Low_complexity Low_complexity 1 37 0 5 1198 839 36 18 0 chr13 80413976 80414086 -39870226 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 5 1198 1057 338 15 2 chr13 80414344 80414739 -39869573 - Lx8 LINE L1 -144 7329 6930 5 1198 1082 300 43 15 chr13 80414875 80415274 -39869038 + Charlie12 DNA MER1_type 2178 2587 -286 5 1198 11280 12 1 1 chr13 80415435 80417281 -39867031 - L1Md_A LINE L1 -3993 1890 45 5 1198 3936 9 2 0 chr13 80417270 80417720 -39866592 + L1Md_A LINE L1 5136 5586 -297 5 1198 8973 4 0 0 chr13 80417721 80418716 -39865596 + L1Md_A LINE L1 5588 6582 0 5 1198 1102 184 107 0 chr13 80418872 80419171 -39865141 - Lx9 LINE L1 -9 7635 7305 5 1198 1948 227 105 11 chr13 80419210 80419687 -39864625 - Lx5 LINE L1 -725 6325 5804 5 1198 1989 186 19 39 chr13 80419661 80420093 -39864219 - L1_Mur2 LINE L1 -954 4923 4501 5 1198 3022 251 6 14 chr13 80420092 80420798 -39863514 + Lx5 LINE L1 6310 7009 -41 5 1198 25 0 0 0 chr13 80421022 80421047 -39863265 + AT_rich Low_complexity Low_complexity 1 25 0 5 1198 21 0 0 0 chr13 80422878 80422899 -39861413 + AT_rich Low_complexity Low_complexity 1 21 0 5 1198 460 135 125 0 chr13 80422899 80422999 -39861313 + B1_Mus1 SINE Alu 1 114 -6 5 1198 252 0 0 0 chr13 80423116 80423144 -39861168 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1198 29 47 0 0 chr13 80424199 80424242 -39860070 + AT_rich Low_complexity Low_complexity 1 43 0 5 1198 556 279 21 32 chr13 80424651 80424840 -39859472 + L1_Rod LINE L1 5460 5646 -201 5 1198 6789 126 4 15 chr13 80424853 80425912 -39858400 - L1_Mus3 LINE L1 -5 6633 5587 5 1198 1416 267 77 36 chr13 80425917 80426414 -39857898 + Lx9 LINE L1 7127 7643 -1 5 1198 230 298 8 111 chr13 80426749 80426866 -39857446 + MLT1J LTR MaLR 170 274 -238 5 1198 22 0 0 0 chr13 80427188 80427210 -39857102 + AT_rich Low_complexity Low_complexity 1 22 0 5 1198 2136 145 23 23 chr13 80428420 80428816 -39855496 + RMER17D2 LTR ERVK 1 396 -413 5 1198 5920 32 28 0 chr13 80428818 80429536 -39854776 - L1Md_F3 LINE L1 0 6584 5847 5 1198 374 177 38 12 chr13 80429538 80429618 -39854694 + RMER17D2 LTR ERVK 808 889 0 5 1198 900 78 23 0 chr13 80429822 80429950 -39854362 - B1_Mus1 SINE Alu 0 148 18 5 1198 411 327 0 0 chr13 80430753 80430857 -39853455 + B3 SINE B2 9 112 -104 5 1198 818 105 0 0 chr13 80430889 80431003 -39853309 + B1_Mus1 SINE Alu 1 114 -34 5 1198 1752 244 157 44 chr13 80430986 80431753 -39852559 - RMER17B LTR ERVK -105 853 1 5 1198 615 223 152 38 chr13 80432339 80432549 -39851763 - Lx6 LINE L1 -704 6756 6523 5 1198 201 196 0 0 chr13 80434531 80434577 -39849735 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1198 449 220 14 28 chr13 80434770 80434915 -39849397 + Lx9 LINE L1 7495 7637 -7 5 1198 32816 104 23 16 chr13 80436867 80443177 -39841135 - L1Md_F2 LINE L1 -3 6579 219 5 1198 28048 111 1 38 chr13 80443198 80444141 -39840171 - L1_Mus2 LINE L1 -1 6565 5655 5 1198 892 136 14 0 chr13 80444141 80444281 -39840031 - B1_Mus2 SINE Alu -5 142 1 5 1198 28048 149 25 42 chr13 80444281 80449761 -39834551 - L1_Mus2 LINE L1 -229 5654 242 5 1198 460 71 70 21 chr13 80449806 80449949 -39834363 + T-rich Low_complexity Low_complexity 5 154 0 5 1198 1033 76 27 40 chr13 80449949 80450099 -39834213 - B1_Mus1 SINE Alu 0 148 1 5 1198 450 53 0 0 chr13 80450573 80450630 -39833682 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1198 2728 148 22 0 chr13 80450903 80451355 -39832957 - Lx2A1 LINE L1 -14 6994 6533 5 1198 423 0 0 0 chr13 80451508 80451555 -39832757 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1198 537 16 0 0 chr13 80451555 80451616 -39832696 + (GA)n Simple_repeat Simple_repeat 2 63 0 5 1198 237 250 103 35 chr13 80451972 80452117 -39832195 - L1M3 LINE L1 -816 5324 5170 5 1198 3018 251 50 131 chr13 80452644 80453695 -39830617 - RMER1B Other Other -55 1011 47 5 1198 5432 88 35 0 chr13 80453725 80454773 -39829539 + Lx3_Mus LINE L1 5129 6233 -776 5 1198 430 268 29 11 chr13 80455130 80455304 -39829008 + L1MA6 LINE L1 6105 6281 -19 5 1198 1087 291 27 14 chr13 80455987 80456356 -39827956 - ORR1D1 LTR MaLR 0 374 1 5 1198 4068 269 75 20 chr13 80456356 80457655 -39826657 - ORR1D1-int LTR MaLR 0 1370 1 5 1198 426 245 122 0 chr13 80457695 80457793 -39826519 - ORR1D1 LTR MaLR -258 116 7 5 1198 597 342 12 12 chr13 80457800 80458046 -39826266 + Lx8 LINE L1 6675 6920 -553 5 1198 696 26 0 0 chr13 80458047 80458125 -39826187 - L1Md_F2 LINE L1 -365 6217 6140 5 1198 1072 73 0 0 chr13 80458125 80458275 -39826037 + L1Md_F2 LINE L1 6421 6570 -12 5 1198 820 337 73 25 chr13 80458281 80458589 -39825723 + Lx8 LINE L1 6912 7226 -247 5 1198 603 40 0 0 chr13 80458589 80458663 -39825649 + (TTCTG)n Simple_repeat Simple_repeat 4 77 0 5 1198 820 337 73 25 chr13 80458663 80458872 -39825440 + Lx8 LINE L1 7227 7454 -19 5 1198 26 64 0 0 chr13 80459011 80459058 -39825254 + AT_rich Low_complexity Low_complexity 1 47 0 5 1198 1938 251 35 15 chr13 80459431 80459977 -39824335 + Lx9 LINE L1 6935 7491 -153 5 1198 2815 228 25 68 chr13 80460109 80460746 -39823566 + L1VL4 LINE L1 94 982 -5578 5 1198 6018 41 0 3 chr13 80460746 80461481 -39822831 - L1Md_F3 LINE L1 -3 6581 5849 5 1198 11603 127 20 26 chr13 80461481 80463633 -39820679 + L1VL4 LINE L1 983 3119 -698 5 1198 7729 116 18 2 chr13 80463632 80464825 -39819487 + L1_Mm LINE L1 4353 5597 -2285 5 1198 233 233 0 0 chr13 80464861 80464904 -39819408 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 5 1198 349 326 113 52 chr13 80465170 80465400 -39818912 - Lx9 LINE L1 -482 7162 6919 5 1198 216 0 0 0 chr13 80465415 80465439 -39818873 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1198 6966 106 16 2 chr13 80465439 80466540 -39817772 + L1_Mus3 LINE L1 5516 6632 -6 5 1198 7188 247 91 59 chr13 80466546 80468676 -39815636 + MYSERV-int LTR ERVK 3870 6059 -491 5 1198 501 32 0 0 chr13 80468676 80468739 -39815573 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1198 7188 247 91 59 chr13 80468739 80469179 -39815133 + MYSERV-int LTR ERVK 6060 6523 -27 5 1198 576 0 0 0 chr13 80469670 80469734 -39814578 + (TTTC)n Simple_repeat Simple_repeat 2 65 0 5 1198 903 100 85 0 chr13 80469736 80469866 -39814446 - B1_Mm SINE Alu -6 141 1 5 1198 471 280 48 20 chr13 80470554 80470700 -39813612 - B1_Mur4 SINE Alu 0 150 1 5 1198 2053 213 29 2 chr13 80470706 80471116 -39813196 - MTC LTR MaLR 0 421 1 5 1198 21 0 0 0 chr13 80471482 80471503 -39812809 + AT_rich Low_complexity Low_complexity 1 21 0 5 1198 972 110 14 0 chr13 80471530 80471675 -39812637 + B1_Mus1 SINE Alu 1 147 -1 5 1198 191 114 0 28 chr13 80471746 80471782 -39812530 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 1198 234 301 116 68 chr13 80471814 80471960 -39812352 - RSINE1 SINE B4 -2 163 11 5 1198 342 162 0 0 chr13 80474532 80474606 -39809706 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 1198 2555 161 17 0 chr13 80476957 80477373 -39806939 + Lx2B LINE L1 6521 6943 -57 5 1198 28 29 0 0 chr13 80477373 80477408 -39806904 + AT_rich Low_complexity Low_complexity 1 35 0 5 1198 421 354 115 28 chr13 80477442 80477765 -39806547 - MLT1A0 LTR MaLR -3 362 12 5 1199 628 247 14 0 chr13 80478572 80478718 -39805594 + B1_Mus1 SINE Alu 1 148 0 5 1199 921 67 0 0 chr13 80478720 80478854 -39805458 + (GA)n Simple_repeat Simple_repeat 2 135 0 5 1199 7258 106 8 6 chr13 80479113 80479728 -39804584 - L1_Mus3 LINE L1 0 6638 6027 5 1199 3098 56 13 8 chr13 80479728 80480122 -39804190 - MTA_Mm LTR MaLR 0 396 1 5 1199 7258 111 14 5 chr13 80480122 80480776 -39803536 - L1_Mus3 LINE L1 -612 6026 5358 5 1199 345 330 91 87 chr13 80481680 80481966 -39802346 + B4A SINE B4 6 292 0 5 1199 203 208 0 19 chr13 80482030 80482084 -39802228 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1199 198 0 0 0 chr13 80482551 80482573 -39801739 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1199 25 0 0 0 chr13 80483551 80483576 -39800736 + AT_rich Low_complexity Low_complexity 1 25 0 5 1199 337 115 0 71 chr13 80483812 80483896 -39800416 + (TTTAG)n Simple_repeat Simple_repeat 1 78 0 5 1199 460 326 0 15 chr13 80483896 80484030 -39800282 - B1_Mur1 SINE Alu 0 149 18 5 1199 44 75 0 0 chr13 80484353 80484446 -39799866 + AT_rich Low_complexity Low_complexity 1 93 0 5 1199 464 32 16 0 chr13 80487328 80487390 -39796922 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 5 1199 239 338 113 0 chr13 80488131 80488202 -39796110 + ID4_ SINE ID 2 80 -3 5 1199 21 36 0 0 chr13 80488339 80488367 -39795945 + AT_rich Low_complexity Low_complexity 1 28 0 6 1199 7069 114 20 1 chr13 80488623 80489863 -39794449 - L1_Mus4 LINE L1 0 6636 5379 6 1199 22 0 0 0 chr13 80489969 80489991 -39794321 + AT_rich Low_complexity Low_complexity 1 22 0 6 1199 961 276 15 8 chr13 80490103 80490370 -39793942 + Lx7 LINE L1 7149 7417 -279 6 1199 295 201 36 12 chr13 80490455 80490621 -39793691 + (TG)n Simple_repeat Simple_repeat 1 170 0 6 1199 266 295 86 0 chr13 80490728 80490833 -39793479 + Lx7 LINE L1 7550 7663 -33 6 1199 355 103 16 49 chr13 80491723 80491784 -39792528 - HAL1-3A_ME LINE L1 -824 2034 1976 6 1199 325 186 19 0 chr13 80491791 80491952 -39792360 + (TG)n Simple_repeat Simple_repeat 1 164 0 6 1199 1946 164 11 0 chr13 80492250 80492603 -39791709 - L1_Mur2 LINE L1 -1634 4243 3887 6 1199 5354 180 9 8 chr13 80492618 80493643 -39790669 + L1_Mur2 LINE L1 4305 5330 -547 6 1199 475 94 0 45 chr13 80493645 80493734 -39790578 + L1Md_F2 LINE L1 6486 6570 -12 6 1199 985 239 58 29 chr13 80493740 80493981 -39790331 + Lx5 LINE L1 6786 7033 -17 6 1199 731 102 0 0 chr13 80494254 80494362 -39789950 + L1_Mm LINE L1 5357 5464 -419 6 1199 1375 297 47 5 chr13 80494361 80494784 -39789528 - Lx6 LINE L1 -599 6861 6421 6 1199 3620 166 38 22 chr13 80495563 80496078 -39788234 - L1_Mur1 LINE L1 -1528 4358 3852 6 1199 450 0 0 0 chr13 80496078 80496128 -39788184 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1199 3620 166 38 22 chr13 80496128 80496368 -39787944 - L1_Mur1 LINE L1 -2035 3851 3591 6 1199 6258 148 145 4 chr13 80496365 80497797 -39786515 + Lx3B LINE L1 4358 6042 -931 6 1199 207 0 0 0 chr13 80497797 80497820 -39786492 + (GGGA)n Simple_repeat Simple_repeat 2 24 0 6 1199 5718 154 121 8 chr13 80497820 80498658 -39785654 + Lx3B LINE L1 6043 6971 -2 6 1199 235 204 0 85 chr13 80498662 80498682 -39785630 + polypurine Low_complexity Low_complexity 4 19 0 6 1199 285 29 0 0 chr13 80498682 80498716 -39785596 + (GGAGAA)n Simple_repeat Simple_repeat 1 34 0 6 1199 235 204 0 85 chr13 80498716 80498754 -39785558 + polypurine Low_complexity Low_complexity 20 57 0 6 1199 957 157 7 11 chr13 80498754 80499199 -39785113 + GA-rich Low_complexity Low_complexity 1 442 0 6 1199 1275 218 61 6 chr13 80499230 80499558 -39784754 + Lx3C LINE L1 6620 6965 -11 6 1199 598 287 29 6 chr13 80500890 80501065 -39783247 - B3A SINE B2 -16 182 4 1 1199 252 59 0 0 chr13 80502872 80502906 -39781406 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1199 28 48 0 0 chr13 80503183 80503225 -39781087 + AT_rich Low_complexity Low_complexity 1 42 0 3 1199 557 196 68 0 chr13 80503307 80503455 -39780857 - Lx9 LINE L1 -107 7537 7380 4 1199 1031 260 79 25 chr13 80503523 80503803 -39780509 + MTD LTR MaLR 3 297 -122 5 1199 461 264 35 35 chr13 80505231 80505376 -39778936 + RMER13A LTR ERVK 1 145 -715 6 1199 738 318 85 69 chr13 80505378 80505767 -39778545 + RMER13A LTR ERVK 388 782 -78 6 1199 266 286 36 100 chr13 80506079 80506124 -39778188 - RMER17C LTR ERVK -119 291 246 7 1199 330 26 0 0 chr13 80506124 80506163 -39778149 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1199 266 286 36 100 chr13 80506163 80506257 -39778055 - RMER17C LTR ERVK -165 245 161 7 1199 306 0 0 0 chr13 80506619 80506653 -39777659 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1199 2856 182 54 69 chr13 80507073 80507773 -39776539 - RMER6C LTR ERVK 0 690 1 1 1199 28238 126 12 8 chr13 80508931 80514614 -39769698 - L1_Mus2 LINE L1 -1 6565 856 1 1199 1555 64 5 0 chr13 80514626 80514830 -39769482 + MTA_Mm LTR MaLR 192 396 0 1 1199 9542 19 1 0 chr13 80514830 80515927 -39768385 + MTA_Mm-int LTR MaLR 1 1098 0 1 1199 3345 33 5 0 chr13 80515927 80516321 -39767991 + MTA_Mm LTR MaLR 1 396 0 1 1199 694 129 31 0 chr13 80516594 80516757 -39767555 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 1 1199 225 0 0 0 chr13 80521920 80521945 -39762367 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1199 207 100 0 0 chr13 80522538 80522568 -39761744 + (TTG)n Simple_repeat Simple_repeat 1 30 0 1 1199 627 337 26 79 chr13 80522630 80522933 -39761379 - B4 SINE B4 -5 287 1 1 1199 3876 39 0 0 chr13 80523037 80523503 -39760809 - L1Md_F2 LINE L1 -476 6106 5641 1 1199 3422 56 25 45 chr13 80523503 80523989 -39760323 + L1Md_F2 LINE L1 6107 6582 0 1 1199 5834 144 68 14 chr13 80524393 80525431 -39758881 + Lx3C LINE L1 5842 6935 -41 1 1199 508 182 15 0 chr13 80526196 80526333 -39757979 + (CA)n Simple_repeat Simple_repeat 1 139 0 1 1199 622 182 197 55 chr13 80528412 80528644 -39755668 + L1VL2 LINE L1 440 640 -2976 2 1199 3345 162 38 9 chr13 80528637 80529293 -39755019 + L1VL2 LINE L1 1476 2150 -1465 2 1199 447 310 51 60 chr13 80529334 80529550 -39754762 - B3 SINE B2 0 216 3 2 1199 6885 120 28 1 chr13 80529623 80531142 -39753170 - L1_Mus3 LINE L1 0 6638 5072 2 1199 370 119 0 0 chr13 80531150 80531217 -39753095 - MusHAL1 LINE L1 -611 2101 2035 2 1199 6518 120 14 12 chr13 80531212 80532239 -39752073 + L1_Mm LINE L1 4091 5119 -764 2 1199 1075 101 0 0 chr13 80532241 80532389 -39751923 + B1_Mus1 SINE Alu 1 148 0 2 1199 215 48 17 118 chr13 80532391 80532510 -39751802 + A-rich Low_complexity Low_complexity 1 107 0 2 1199 271 39 14 122 chr13 80532534 80532681 -39751631 + A-rich Low_complexity Low_complexity 1 131 0 2 1199 306 62 0 86 chr13 80532705 80532810 -39751502 + (CAAAAA)n Simple_repeat Simple_repeat 1 96 0 2 1199 2743 155 6 0 chr13 80532811 80533308 -39751004 + MusHAL1 LINE L1 1233 1732 -980 2 1199 790 202 20 10 chr13 80533309 80533504 -39750808 + Lx2A1 LINE L1 6807 7003 -5 2 1199 1012 90 7 7 chr13 80533682 80533827 -39750485 - B1_Mm SINE Alu -2 145 1 3 1199 656 317 55 0 chr13 80533930 80534132 -39750180 + ID_B1 SINE B4 3 215 -9 3 1199 1098 95 0 0 chr13 80534239 80534386 -39749926 + B1_Mus1 SINE Alu 2 148 0 3 1199 6441 144 91 17 chr13 80535688 80536276 -39748036 + L1_Mur2 LINE L1 2390 3057 -2820 3 1199 1103 76 7 0 chr13 80536276 80536421 -39747891 + B1_Mm SINE Alu 2 147 0 3 1199 6441 144 91 17 chr13 80536421 80537194 -39747118 + L1_Mur2 LINE L1 3058 3852 -2025 3 1199 3119 189 47 31 chr13 80537215 80537893 -39746419 + Lx3C LINE L1 6284 6972 -4 3 1199 292 92 0 8 chr13 80537898 80537947 -39746365 + L1_Mur2 LINE L1 3849 3895 -1985 3 1199 2276 102 9 0 chr13 80538002 80538326 -39745986 - ORR1A2 LTR MaLR 0 327 1 3 1199 1297 178 31 56 chr13 80538606 80538832 -39745480 - ORR1B2 LTR MaLR -8 359 130 3 1199 5863 35 0 1 chr13 80538832 80539528 -39744784 + L1Md_F2 LINE L1 5877 6571 -11 3 1199 1297 178 31 56 chr13 80539528 80539587 -39744725 - ORR1B2 LTR MaLR -238 129 81 3 1199 1290 251 78 36 chr13 80539606 80540089 -39744223 + RLTR20A LTR ERVK 49 559 -4 3 1199 321 203 16 0 chr13 80540079 80540143 -39744169 - ORR1B2 LTR MaLR -285 82 18 3 1199 252 0 0 0 chr13 80541593 80541621 -39742691 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1199 255 304 84 32 chr13 80542249 80542344 -39741968 - PB1D7 SINE Alu -2 118 19 4 1199 208 0 0 59 chr13 80542354 80542388 -39741924 + (TA)n Simple_repeat Simple_repeat 2 33 0 4 1199 199 316 41 58 chr13 80543335 80543456 -39740856 - MIRc SINE MIR -7 261 143 4 1199 210 122 0 47 chr13 80543456 80543499 -39740813 + (CAAA)n Simple_repeat Simple_repeat 3 43 0 4 1199 50 42 0 0 chr13 80544615 80544686 -39739626 + AT_rich Low_complexity Low_complexity 1 71 0 4 1199 64 57 0 0 chr13 80545398 80545504 -39738808 + AT_rich Low_complexity Low_complexity 1 106 0 4 1199 229 364 0 0 chr13 80546333 80546399 -39737913 - ID_B1 SINE B4 -75 149 84 4 1199 1556 359 66 8 chr13 80546546 80547306 -39737006 - Lx8 LINE L1 -167 7306 6503 4 1199 376 280 0 18 chr13 80547587 80547696 -39736616 + L1_Rod LINE L1 5734 5840 -7 4 1199 236 188 143 66 chr13 80548218 80548309 -39736003 - MIR SINE MIR -2 260 163 5 1199 374 339 55 60 chr13 80548831 80549013 -39735299 - B4A SINE B4 -111 181 1 5 1199 21 0 0 0 chr13 80550231 80550252 -39734060 + AT_rich Low_complexity Low_complexity 1 21 0 5 1199 207 0 0 0 chr13 80551590 80551613 -39732699 + (TC)n Simple_repeat Simple_repeat 2 24 0 5 1199 876 28 0 0 chr13 80551613 80551719 -39732593 + (TG)n Simple_repeat Simple_repeat 2 108 0 5 1199 21 0 0 0 chr13 80551920 80551941 -39732371 + AT_rich Low_complexity Low_complexity 1 21 0 5 1199 2175 200 43 2 chr13 80553805 80554250 -39730062 + Lx6 LINE L1 6289 6751 -709 5 1199 749 214 0 4 chr13 80554250 80554492 -39729820 + GA-rich Low_complexity Low_complexity 1 240 0 5 1199 253 233 16 16 chr13 80554513 80554574 -39729738 + Lx7 LINE L1 6777 6837 -859 5 1199 1852 75 4 4 chr13 80554983 80555236 -39729076 + L1_Mus2 LINE L1 6313 6565 -1 5 1199 285 274 43 32 chr13 80555516 80555655 -39728657 + L1MA4 LINE L1 5738 5879 -421 6 1199 2453 159 26 2 chr13 80555655 80556084 -39728228 + Lx LINE L1 6215 6653 -1 6 1199 285 274 43 32 chr13 80556084 80556129 -39728183 + L1MA4 LINE L1 5880 5924 -376 6 1199 191 175 18 0 chr13 80556144 80556201 -39728111 + CT-rich Low_complexity Low_complexity 1 58 0 6 1199 564 42 0 0 chr13 80556201 80556272 -39728040 + (TG)n Simple_repeat Simple_repeat 2 72 0 6 1199 379 297 168 40 chr13 80556865 80557163 -39727149 + LTR16B1 LTR ERVL 144 479 -1 6 1199 203 244 0 22 chr13 80557246 80557292 -39727020 + GA-rich Low_complexity Low_complexity 4 48 0 6 1199 549 76 0 0 chr13 80558709 80558788 -39725524 + (GA)n Simple_repeat Simple_repeat 1 79 0 6 1199 354 260 143 62 chr13 80558870 80559128 -39725184 - B4 SINE B4 -11 281 3 6 1199 5074 155 92 10 chr13 80559299 80559353 -39724959 - RLTR25A LTR ERVK 0 1103 1033 6 1199 225 65 0 0 chr13 80559353 80559384 -39724928 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 6 1199 5074 155 92 10 chr13 80559384 80560338 -39723974 - RLTR25A LTR ERVK -71 1032 13 6 1199 361 429 80 55 chr13 80560539 80561028 -39723284 + LTR16D LTR ERVL 137 637 -14 7 1199 4361 59 2 12 chr13 80561196 80561761 -39722551 + L1_Mus1 LINE L1 6008 6566 -1 7 1199 1876 174 109 58 chr13 80562504 80562918 -39721394 - RLTR41 LTR ERV1 -2 444 10 7 1199 43 47 0 0 chr13 80562987 80563051 -39721261 + AT_rich Low_complexity Low_complexity 1 64 0 7 1199 6950 124 25 4 chr13 80563092 80564845 -39719467 - L1_Mus3 LINE L1 -5 6633 4860 7 1199 9252 145 174 28 chr13 80564837 80567422 -39716890 - L1_Mus3 LINE L1 -2377 3506 571 7 1199 37891 13 1 7 chr13 80568177 80573540 -39710772 + L1Md_A LINE L1 260 5586 -297 7 1199 8762 15 0 1 chr13 80573540 80574536 -39709776 + L1Md_A LINE L1 5587 6581 -1 7 1199 32 0 0 0 chr13 80574550 80574582 -39709730 + AT_rich Low_complexity Low_complexity 1 32 0 7 1199 1067 60 0 0 chr13 80575138 80575272 -39709040 - B1_Mus1 SINE Alu -1 147 14 7 1199 1676 202 81 19 chr13 80575542 80575911 -39708401 + ORR1B1 LTR MaLR 3 394 0 7 1199 279 0 0 0 chr13 80577593 80577624 -39706688 + (TC)n Simple_repeat Simple_repeat 1 31 0 7 1199 474 18 0 0 chr13 80577624 80577678 -39706634 + (CA)n Simple_repeat Simple_repeat 1 55 0 8 1199 411 38 0 0 chr13 80579453 80579506 -39704806 + (CA)n Simple_repeat Simple_repeat 2 54 0 8 1199 21 0 0 0 chr13 80580080 80580101 -39704211 + AT_rich Low_complexity Low_complexity 1 21 0 8 1199 28 29 0 0 chr13 80580417 80580452 -39703860 + AT_rich Low_complexity Low_complexity 1 35 0 8 1199 245 327 47 47 chr13 80581029 80581135 -39703177 + B4A SINE B4 6 111 -181 8 1199 253 288 25 0 chr13 80581694 80581774 -39702538 + (TATG)n Simple_repeat Simple_repeat 3 84 0 8 1199 248 357 114 37 chr13 80582189 80582462 -39701850 - MLT1J LTR MaLR -29 483 190 8 1199 8320 153 90 8 chr13 80583634 80585514 -39698798 - Lx3B LINE L1 -6 6967 4813 8 1199 243 342 68 0 chr13 80585519 80585592 -39698720 - PB1D10 SINE Alu -39 78 1 8 1199 372 301 68 0 chr13 80587492 80587595 -39696717 - RSINE1 SINE B4 -19 146 37 8 1199 3251 159 15 11 chr13 80587639 80588250 -39696062 + L1_Mur1 LINE L1 2465 3077 -2809 9 1199 478 243 86 2 chr13 80588252 80588416 -39695896 + RLTR11A LTR ERVK 121 296 -231 9 1199 867 138 18 25 chr13 80588424 80588587 -39695725 + L1_Mur3 LINE L1 4183 4344 -1536 9 1199 1448 164 124 129 chr13 80588591 80588979 -39695333 - ORR1B1 LTR MaLR -14 380 1 9 1199 3606 198 133 26 chr13 80588979 80589771 -39694541 + L1_Mur3 LINE L1 4342 5250 -630 9 1199 5757 134 38 2 chr13 80589771 80590719 -39693593 + Lx2 LINE L1 6015 6996 -1 9 1199 3606 198 133 26 chr13 80590719 80590984 -39693328 + L1_Mur3 LINE L1 5251 5512 -368 9 1199 1294 269 80 31 chr13 80590964 80591415 -39692897 + Lx6 LINE L1 6830 7349 -111 9 1199 237 65 0 0 chr13 80591468 80591499 -39692813 + (CAGG)n Simple_repeat Simple_repeat 2 32 0 9 1199 567 0 0 0 chr13 80591500 80591563 -39692749 + (CAGAGA)n Simple_repeat Simple_repeat 4 66 0 9 1199 222 402 9 38 chr13 80591567 80591673 -39692639 + ID_B1 SINE B4 74 176 -48 9 1199 236 369 19 37 chr13 80591587 80591694 -39692618 + PB1D10 SINE Alu 13 117 0 9 1199 316 280 94 16 chr13 80591796 80591923 -39692389 - L1MEc LINE L1 -1257 5062 4926 1 1199 222 71 89 0 chr13 80592585 80592641 -39691671 + (TTAAA)n Simple_repeat Simple_repeat 4 64 0 1 1199 206 239 0 14 chr13 80592780 80592852 -39691460 + (TTAA)n Simple_repeat Simple_repeat 1 71 0 1 1199 1484 258 44 15 chr13 80592880 80593286 -39691026 - MTD LTR MaLR 0 419 2 1 1199 418 321 18 25 chr13 80593520 80593683 -39690629 - RSINE1 SINE B4 -1 164 3 1 1199 27 62 0 0 chr13 80593852 80593900 -39690412 + AT_rich Low_complexity Low_complexity 1 48 0 1 1199 401 310 18 12 chr13 80593915 80594085 -39690227 + (TG)n Simple_repeat Simple_repeat 2 172 0 1 1199 396 296 143 34 chr13 80594086 80594233 -39690079 - RSINE1 SINE B4 0 165 3 1 1199 270 0 0 0 chr13 80594244 80594274 -39690038 + (TTC)n Simple_repeat Simple_repeat 2 31 0 1 1199 22 56 0 0 chr13 80594274 80594310 -39690002 + AT_rich Low_complexity Low_complexity 1 36 0 1 1199 372 304 128 29 chr13 80594603 80595050 -39689262 - L1MC LINE L1 -1257 4889 4399 1 1199 32 26 0 0 chr13 80595145 80595184 -39689128 + AT_rich Low_complexity Low_complexity 1 39 0 1 1199 281 373 31 22 chr13 80595193 80595418 -39688894 - L1MEc LINE L1 -2013 4306 4080 1 1199 489 276 103 26 chr13 80595891 80596241 -39688071 - L1MEc LINE L1 -4256 2144 1768 1 1199 28 0 0 0 chr13 80596560 80596588 -39687724 + AT_rich Low_complexity Low_complexity 1 28 0 1 1199 204 217 9 54 chr13 80596750 80596862 -39687450 + (TATAA)n Simple_repeat Simple_repeat 5 111 0 1 1199 423 163 23 11 chr13 80596982 80597069 -39687243 - Lx LINE L1 -697 6947 6860 1 1199 731 174 121 15 chr13 80597256 80597455 -39686857 - Lx9 LINE L1 -1 7643 7424 1 1199 7023 110 23 7 chr13 80597456 80598498 -39685814 - Lx LINE L1 -8 6646 5588 1 1199 1001 230 277 11 chr13 80598517 80598894 -39685418 - Lx9 LINE L1 -233 7411 6934 1 1199 498 186 0 20 chr13 80598893 80598992 -39685320 + Lx9 LINE L1 6752 6848 -796 1 1199 255 361 56 25 chr13 80599472 80599634 -39684678 + B4A SINE B4 2 168 -124 1 1199 387 0 0 0 chr13 80599726 80599769 -39684543 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1199 5914 114 7 4 chr13 80599856 80600835 -39683477 - L1_Mus3 LINE L1 -691 5947 4963 1 1199 4295 102 25 11 chr13 80600835 80601487 -39682825 + L1_Mus3 LINE L1 5972 6632 -6 1 1199 404 93 0 0 chr13 80601661 80601715 -39682597 + L1_Mm LINE L1 5054 5107 -776 1 1199 8945 26 17 0 chr13 80601706 80602770 -39681542 + L1Md_T LINE L1 4505 5586 -297 1 1199 8322 39 0 0 chr13 80602770 80603766 -39680546 + L1Md_T LINE L1 5587 6582 0 1 1199 432 192 0 0 chr13 80603768 80603846 -39680466 + L1_Mur2 LINE L1 5095 5172 -705 1 1199 245 198 12 0 chr13 80604082 80604163 -39680149 + CT-rich Low_complexity Low_complexity 1 82 0 1 1199 454 299 95 0 chr13 80605308 80605445 -39678867 + MT2A LTR ERVL 2 151 -382 1 1199 191 321 83 0 chr13 80605918 80606002 -39678310 + L2a LINE L2 3336 3426 0 1 1199 239 300 10 20 chr13 80607194 80607296 -39677016 - RMER15 LTR ERVL -194 381 281 1 1199 583 37 24 0 chr13 80607599 80607681 -39676631 + (TG)n Simple_repeat Simple_repeat 1 84 0 1 1199 558 0 0 0 chr13 80607681 80607742 -39676570 + (GA)n Simple_repeat Simple_repeat 1 62 0 1 1199 4981 113 18 15 chr13 80607874 80608134 -39676178 - L1_Mm LINE L1 -989 4894 4629 1 1199 234 62 0 0 chr13 80608134 80608166 -39676146 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 1199 4981 113 18 15 chr13 80608166 80608707 -39675605 - L1_Mm LINE L1 -1255 4628 4092 1 1199 427 88 0 0 chr13 80608702 80608770 -39675542 + MusHAL1 LINE L1 2035 2102 -610 1 149 5024 100 12 4 chr13 80608778 80609739 -39674573 + L1_Mus3 LINE L1 5071 6041 -597 1 1200 1682 208 81 12 chr13 80609868 80610213 -39674099 + ORR1B1 LTR MaLR 1 369 -25 1 1200 1259 295 90 44 chr13 80610213 80610737 -39673575 - RMER15-int LTR ERVL -3450 1549 1002 1 1200 312 333 71 16 chr13 80611112 80611295 -39673017 - RMER15-int LTR ERVL -4461 538 346 1 1200 325 333 63 42 chr13 80611647 80611885 -39672427 - RMER15 LTR ERVL -40 535 293 1 1200 5728 81 18 0 chr13 80612263 80613050 -39671262 - Lx3_Mus LINE L1 -312 5574 4774 1 1200 9459 88 36 34 chr13 80613062 80614474 -39669838 + Lx3_Mus LINE L1 5587 7001 -8 1 1200 917 315 68 46 chr13 80614482 80614970 -39669342 - MLT2B1 LTR ERVL -34 481 1 1 1200 260 212 0 15 chr13 80615083 80615150 -39669162 + GA-rich Low_complexity Low_complexity 3 68 0 1 1200 522 31 0 0 chr13 80615384 80615448 -39668864 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1200 443 179 81 0 chr13 80615792 80615915 -39668397 + Lx9 LINE L1 7511 7643 -1 1 1200 606 336 50 25 chr13 80617025 80617143 -39667169 - Lx8 LINE L1 -3 7470 7350 1 1200 2908 49 6 0 chr13 80617143 80617509 -39666803 - L1Md_F3 LINE L1 0 6584 6217 1 1200 606 336 50 25 chr13 80617509 80617713 -39666599 - Lx8 LINE L1 -124 7349 7141 1 1200 270 73 0 0 chr13 80617805 80617846 -39666466 + (CAT)n Simple_repeat Simple_repeat 1 41 0 1 1200 1749 28 0 0 chr13 80618091 80618302 -39666010 - L1_Mus1 LINE L1 -2 6565 6355 1 1200 239 254 62 48 chr13 80618353 80618498 -39665814 + RMER17D LTR ERVK 380 526 -363 1 1200 32 0 0 0 chr13 80618606 80618638 -39665674 + AT_rich Low_complexity Low_complexity 1 32 0 1 1200 325 333 41 18 chr13 80618754 80618925 -39665387 + MIR SINE MIR 67 241 -21 1 1200 437 288 23 39 chr13 80619100 80619230 -39665082 + RSINE1 SINE B4 38 165 0 1 1200 234 0 0 0 chr13 80619269 80619295 -39665017 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1200 384 323 111 104 chr13 80619485 80619564 -39664748 - B4A SINE B4 -2 290 220 1 1200 3523 164 41 0 chr13 80619564 80620180 -39664132 - Lx LINE L1 -4 6650 6010 1 1200 384 323 111 104 chr13 80620180 80620380 -39663932 - B4A SINE B4 -73 219 9 1 1200 324 303 182 46 chr13 80620573 80621030 -39663282 - Charlie24 DNA MER1_type -85 2365 1847 1 1200 1253 267 44 0 chr13 80621077 80621418 -39662894 - Lx6 LINE L1 -15 7445 7090 1 1200 573 208 43 38 chr13 80621535 80621720 -39662592 - Lx7 LINE L1 0 7696 7511 1 1200 1049 267 40 16 chr13 80621906 80622229 -39662083 + Lx9 LINE L1 6763 7093 -551 1 1200 2911 197 102 1 chr13 80622310 80622990 -39661322 - L1_Mur3 LINE L1 -910 4970 4223 1 1200 837 118 14 29 chr13 80622987 80623126 -39661186 + Lx2B LINE L1 5666 5802 -1198 1 1200 21 0 0 0 chr13 80623773 80623794 -39660518 + AT_rich Low_complexity Low_complexity 1 21 0 1 1200 2559 161 88 21 chr13 80626027 80626553 -39657759 - RLTR31_Mm LTR ERVK 0 561 1 1 1200 23 0 0 0 chr13 80626592 80626615 -39657697 + AT_rich Low_complexity Low_complexity 1 23 0 1 1200 342 343 76 21 chr13 80626876 80627114 -39657198 + Lx8 LINE L1 6991 7241 -232 1 1200 2032 249 105 54 chr13 80627129 80627969 -39656343 + RMER17B LTR ERVK 6 888 -70 1 1200 276 30 0 0 chr13 80627995 80628028 -39656284 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1200 315 0 0 0 chr13 80628028 80628062 -39656250 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 1200 369 0 0 0 chr13 80628062 80628102 -39656210 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1200 2642 37 24 174 chr13 80628354 80628813 -39655499 - RLTR10 LTR ERVK 0 390 1 1 1200 8663 26 1 0 chr13 80628815 80629809 -39654503 - RLTR10-int LTR ERVK -3 1984 990 1 1200 318 256 62 39 chr13 80629891 80630021 -39654291 - RLTR10-int LTR ERVK -5987 1594 1462 1 1200 8023 40 2 2 chr13 80630085 80631043 -39653269 - RLTR10-int LTR ERVK -989 998 41 1 1200 2620 40 24 174 chr13 80631053 80631512 -39652800 - RLTR10 LTR ERVK 0 390 1 1 1200 2202 73 21 0 chr13 80631970 80632259 -39652053 - L1_Mus1 LINE L1 -1 6566 6272 1 1200 296 327 125 0 chr13 80633769 80633873 -39650439 + RSINE1 SINE B4 5 121 -44 1 1200 273 57 0 0 chr13 80633878 80633913 -39650399 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1200 326 273 194 31 chr13 80634818 80635041 -39649271 + L1M2 LINE L1 4523 4783 -1357 1 1200 1776 137 114 32 chr13 80635041 80635419 -39648893 + RLTR9E LTR ERVK 1 409 0 1 1200 255 269 67 8 chr13 80635419 80635464 -39648848 + L1M2 LINE L1 4784 4830 -1310 1 1200 52 50 0 0 chr13 80635532 80635612 -39648700 + AT_rich Low_complexity Low_complexity 1 80 0 1 1200 434 299 88 18 chr13 80635645 80636218 -39648094 + Lx8 LINE L1 4915 5593 -569 1 1200 396 302 48 100 chr13 80636378 80636647 -39647665 + Lx8 LINE L1 5637 5925 -1548 1 1200 23 33 0 0 chr13 80636899 80636929 -39647383 + AT_rich Low_complexity Low_complexity 1 30 0 1 1200 38 39 0 0 chr13 80637322 80637374 -39646938 + AT_rich Low_complexity Low_complexity 1 52 0 1 1200 443 130 0 13 chr13 80637650 80637728 -39646584 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1200 3171 156 87 5 chr13 80637774 80638336 -39645976 + Lx3B LINE L1 6350 6957 -16 1 1200 27 0 0 0 chr13 80638336 80638363 -39645949 + AT_rich Low_complexity Low_complexity 1 27 0 1 1200 523 346 0 30 chr13 80638419 80638586 -39645726 + RSINE1 SINE B4 4 165 0 1 1200 1270 336 63 93 chr13 80639763 80640340 -39643972 - Lx9 LINE L1 -388 7256 6678 1 1200 1049 95 7 13 chr13 80640340 80640489 -39643823 + B1_Mus1 SINE Alu 1 148 0 1 1200 1270 336 63 93 chr13 80640489 80640828 -39643484 - Lx9 LINE L1 -967 6677 6367 1 1200 497 301 14 7 chr13 80641805 80641952 -39642360 - Lx9 LINE L1 -1099 6545 6398 1 1200 393 123 0 0 chr13 80641987 80642052 -39642260 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1200 1702 266 106 49 chr13 80642200 80643149 -39641163 - Lx9 LINE L1 -779 5803 4744 1 1200 29257 110 9 20 chr13 80643638 80646772 -39637540 - L1_Mus2 LINE L1 -1 6565 3477 1 1200 387 56 0 0 chr13 80646772 80646826 -39637486 + (TTG)n Simple_repeat Simple_repeat 1 54 0 1 1200 29257 120 12 10 chr13 80646826 80649010 -39635302 - L1_Mus2 LINE L1 -2407 3476 1266 1 1200 1037 82 0 20 chr13 80649010 80649159 -39635153 - B1_Mm SINE Alu 0 147 2 1 1200 29257 99 9 46 chr13 80649159 80650037 -39634275 - L1_Mus2 LINE L1 -5373 1265 409 1 1200 344 313 60 24 chr13 80650160 80650327 -39633985 - L1MC LINE L1 -1281 4865 4693 1 1200 276 30 0 0 chr13 80650458 80650491 -39633821 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1200 303 239 56 0 chr13 80650661 80650732 -39633580 - B3A SINE B2 -59 139 65 1 1200 531 282 85 29 chr13 80650955 80651236 -39633076 + L1MC4a LINE L1 7292 7588 -294 1 1200 3204 47 3 3 chr13 80651596 80651981 -39632331 + IAPEY_LTR LTR ERVK 1 385 0 1 1200 25 65 0 0 chr13 80652858 80652904 -39631408 + AT_rich Low_complexity Low_complexity 1 46 0 1 1200 368 125 16 0 chr13 80655317 80655381 -39628931 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1200 1143 70 0 0 chr13 80656281 80656423 -39627889 - B1_Mus1 SINE Alu -5 143 2 1 1200 197 65 32 0 chr13 80657182 80657213 -39627099 + (TA)n Simple_repeat Simple_repeat 1 32 0 1 1200 420 82 0 0 chr13 80657804 80657865 -39626447 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1200 952 167 21 21 chr13 80658220 80658410 -39625902 - B2_Mm2 SINE B2 -4 191 2 1 1200 317 295 54 12 chr13 80658688 80658856 -39625456 + L1MA6 LINE L1 6107 6281 -19 1 1200 717 308 69 26 chr13 80660159 80660462 -39623850 - MLT1A0 LTR MaLR -2 363 48 1 1200 26 30 0 0 chr13 80661500 80661533 -39622779 + AT_rich Low_complexity Low_complexity 1 33 0 1 1200 934 79 0 7 chr13 80661628 80661768 -39622544 - L1_Mus2 LINE L1 0 6566 6428 2 1200 22 0 0 0 chr13 80662047 80662069 -39622243 + AT_rich Low_complexity Low_complexity 1 22 0 2 1200 2612 303 99 65 chr13 80664309 80665143 -39619169 - Lx8 LINE L1 -6 7467 6609 2 1200 958 93 58 0 chr13 80665143 80665282 -39619030 + B1_Mus1 SINE Alu 2 148 0 2 1200 2612 303 99 65 chr13 80665282 80665684 -39618628 - Lx8 LINE L1 -865 6608 6189 2 1200 21 36 0 0 chr13 80665979 80666007 -39618305 + AT_rich Low_complexity Low_complexity 1 28 0 2 1200 1031 95 7 0 chr13 80666372 80666509 -39617803 + B1_Mus1 SINE Alu 2 139 -9 2 1200 243 0 0 0 chr13 80666509 80666536 -39617776 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1200 1266 90 0 0 chr13 80666538 80666716 -39617596 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 2 1200 341 131 0 28 chr13 80666716 80666787 -39617525 + GA-rich Low_complexity Low_complexity 1 69 0 2 1200 2871 217 48 69 chr13 80667371 80668098 -39616214 + RMER13B LTR ERVK 2 713 -195 2 1200 778 246 30 54 chr13 80668086 80668401 -39615911 - RMER13A LTR ERVK -20 840 406 2 1200 197 97 68 27 chr13 80668599 80668673 -39615639 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1200 279 304 70 23 chr13 80669233 80669361 -39614951 - MLT1J2 LTR MaLR -48 400 267 2 1200 1025 294 48 6 chr13 80669536 80669848 -39614464 - MLT1B LTR MaLR 0 390 66 2 1200 297 151 0 0 chr13 80670306 80670359 -39613953 + (TGG)n Simple_repeat Simple_repeat 1 53 0 2 1200 333 0 0 0 chr13 80670359 80670396 -39613916 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1200 237 231 164 62 chr13 80672964 80673208 -39611104 - HAL1 LINE L1 -968 1539 1271 2 1200 247 281 115 40 chr13 80673334 80673560 -39610752 - L1ME3A LINE L1 -213 5960 5718 2 1200 243 190 68 17 chr13 80673584 80673643 -39610669 + ORR1D2 LTR MaLR 309 370 0 2 1200 1128 69 0 0 chr13 80674229 80674373 -39609939 + B1_Mm SINE Alu 2 145 -2 2 1200 414 0 0 0 chr13 80674373 80674419 -39609893 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2 1200 2635 152 18 13 chr13 80674566 80675020 -39609292 - RLTR28B LTR ERVL -3 478 23 2 1200 441 0 0 0 chr13 80675693 80675742 -39608570 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1200 270 265 19 38 chr13 80675743 80675849 -39608463 - L1MEg LINE L1 -4932 1152 1049 2 1200 3480 13 5 0 chr13 80676005 80676399 -39607913 + MTA_Mm LTR MaLR 1 396 0 2 1200 9444 19 4 0 chr13 80676399 80677493 -39606819 + MTA_Mm-int LTR MaLR 1 1098 0 2 1200 3488 13 5 0 chr13 80677493 80677887 -39606425 + MTA_Mm LTR MaLR 1 396 0 2 1200 5160 56 8 0 chr13 80678059 80678701 -39605611 - L1Md_F2 LINE L1 -12 6570 5924 2 1200 1066 32 0 0 chr13 80678701 80678827 -39605485 + L1Md_F2 LINE L1 5812 5937 -645 2 1200 1859 63 52 0 chr13 80678895 80679179 -39605133 - L1Md_F3 LINE L1 0 6584 6306 2 1200 2124 207 45 8 chr13 80679284 80679756 -39604556 - RLTR11A2 LTR ERVK 0 527 39 2 1200 252 328 0 0 chr13 80680450 80680517 -39603795 + polypurine Low_complexity Low_complexity 2 68 0 2 1200 249 303 30 0 chr13 80680580 80680679 -39603633 - L1M2 LINE L1 -523 5777 5676 2 1200 25 51 0 0 chr13 80681656 80681695 -39602617 + AT_rich Low_complexity Low_complexity 1 39 0 2 1200 4441 181 118 22 chr13 80682615 80683502 -39600810 - Lx5 LINE L1 -3 7047 6076 2 1200 574 301 84 30 chr13 80683516 80683769 -39600543 + MLT1A1 LTR MaLR 132 408 0 2 1200 32 75 0 0 chr13 80683878 80683945 -39600367 + AT_rich Low_complexity Low_complexity 1 67 0 2 1200 211 146 24 0 chr13 80684928 80684969 -39599343 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 2 1200 415 377 70 36 chr13 80685036 80685541 -39598771 - MLT1E LTR MaLR -34 619 1 2 1200 22 70 0 0 chr13 80685934 80685977 -39598335 + AT_rich Low_complexity Low_complexity 1 43 0 2 1200 1253 257 48 10 chr13 80686487 80686801 -39597511 - MTEb LTR MaLR -13 366 41 2 1200 420 246 162 35 chr13 80686800 80686973 -39597339 - B3 SINE B2 -2 214 15 2 1200 198 318 52 70 chr13 80688156 80688271 -39596041 + L2c LINE L2 3270 3382 -5 2 1200 219 36 0 0 chr13 80689268 80689296 -39595016 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2 1200 249 270 68 0 chr13 80689618 80689692 -39594620 + ID4_ SINE ID 4 82 -1 2 1200 226 300 30 146 chr13 80689692 80689782 -39594530 + ID_B1 SINE B4 4 148 -76 2 1200 454 288 63 68 chr13 80689835 80690025 -39594287 + Lx8 LINE L1 6762 6950 -523 2 1200 402 57 0 0 chr13 80690028 80690081 -39594231 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1200 438 108 0 0 chr13 80690081 80690146 -39594166 + (AGGGGG)n Simple_repeat Simple_repeat 6 70 0 2 1200 876 341 33 3 chr13 80690158 80690517 -39593795 + Lx8 LINE L1 6977 7346 -127 2 1200 25 51 0 0 chr13 80690579 80690618 -39593694 + AT_rich Low_complexity Low_complexity 1 39 0 2 1200 204 128 42 21 chr13 80690697 80690745 -39593567 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1200 2426 128 43 31 chr13 80691507 80691844 -39592468 - Lx4B LINE L1 -422 6636 6291 2 1200 2969 78 13 2 chr13 80691844 80692240 -39592072 - MTB LTR MaLR 0 400 1 2 1200 2426 128 43 31 chr13 80692240 80692346 -39591966 - Lx4B LINE L1 -768 6290 6188 2 1200 1246 176 159 23 chr13 80692342 80692644 -39591668 + Lx4B LINE L1 6644 6986 -72 2 1200 267 31 0 0 chr13 80693918 80693950 -39590362 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1200 259 335 141 49 chr13 80694032 80694217 -39590095 + MLT1A LTR MaLR 1 202 -163 2 1200 240 233 101 14 chr13 80694315 80694463 -39589849 - MER44A DNA MER2_type -90 249 89 2 1200 332 272 36 64 chr13 80694524 80694634 -39589678 + MLT1A LTR MaLR 268 374 0 2 1200 705 24 0 0 chr13 80694726 80694809 -39589503 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 2 1200 340 309 0 0 chr13 80695523 80695617 -39588695 + (CA)n Simple_repeat Simple_repeat 1 94 0 2 1200 542 159 9 0 chr13 80695635 80695742 -39588570 + (CA)n Simple_repeat Simple_repeat 2 109 0 2 1200 199 317 0 16 chr13 80696883 80696944 -39587368 + L2c LINE L2 2783 2842 -577 2 1200 1208 263 57 78 chr13 80697091 80697475 -39586837 - MTE2b LTR MaLR -1 378 3 2 1200 38911 48 6 8 chr13 80697484 80703799 -39580513 - L1Md_T LINE L1 -2 6580 272 2 1200 256 312 85 31 chr13 80704523 80704652 -39579660 + L2c LINE L2 3214 3349 -38 2 1200 290 356 46 103 chr13 80704708 80704971 -39579341 - MTEa LTR MaLR -12 367 120 2 1200 470 328 11 39 chr13 80704986 80705167 -39579145 + B4A SINE B4 114 289 -3 2 1200 22 70 0 0 chr13 80705277 80705320 -39578992 + AT_rich Low_complexity Low_complexity 1 43 0 2 1200 406 312 9 0 chr13 80706881 80706990 -39577322 + RSINE1 SINE B4 3 112 -53 2 1200 205 244 0 0 chr13 80706992 80707018 -39577294 + (TATG)n Simple_repeat Simple_repeat 2 27 0 2 1200 381 93 0 0 chr13 80707018 80707072 -39577240 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1200 205 244 0 0 chr13 80707072 80707090 -39577222 + (TATG)n Simple_repeat Simple_repeat 4 21 0 2 1200 2398 262 63 17 chr13 80707096 80707814 -39576498 - Lx9 LINE L1 -215 7429 6679 2 1200 211 213 0 16 chr13 80707930 80707992 -39576320 + A-rich Low_complexity Low_complexity 3 63 0 2 1200 551 296 7 7 chr13 80707994 80708137 -39576175 - ORR1D-int LTR MaLR -440 930 788 2 1200 1350 154 151 15 chr13 80708156 80708427 -39575885 + ORR1A2 LTR MaLR 12 319 -8 2 1200 1921 199 23 11 chr13 80708501 80709212 -39575100 + L1_Mur2 LINE L1 795 1542 -4344 2 1200 5088 72 1 0 chr13 80709207 80709874 -39574438 - L1Md_F2 LINE L1 -618 5265 4598 2 1200 2175 80 0 3 chr13 80709874 80710161 -39574151 + L1Md_F2 LINE L1 5301 5586 -297 2 1200 7900 46 4 0 chr13 80710161 80711156 -39573156 + L1Md_F2 LINE L1 5587 6582 0 2 1200 6742 184 45 12 chr13 80711157 80711522 -39572790 + L1_Mur2 LINE L1 1531 1902 -3975 2 1200 236 30 30 0 chr13 80711522 80711555 -39572757 + (CAA)n Simple_repeat Simple_repeat 3 36 0 2 1200 6742 184 45 12 chr13 80711555 80712650 -39571662 + L1_Mur2 LINE L1 1903 3038 -2839 2 1200 1594 147 0 4 chr13 80712650 80712909 -39571403 - L1_Mur1 LINE L1 -304 5582 5325 2 1200 3816 204 65 10 chr13 80712916 80713713 -39570599 + Lx2B LINE L1 6157 6997 -3 2 1200 8969 199 24 106 chr13 80713733 80715206 -39569106 + L1_Mur2 LINE L1 3059 4361 -1522 2 1200 330 333 37 63 chr13 80715206 80715395 -39568917 + RLTR23 LTR ERV1 247 430 0 2 1200 8969 199 24 106 chr13 80715395 80717053 -39567259 + L1_Mur2 LINE L1 4362 5829 -54 2 1200 2081 146 183 20 chr13 80717072 80717520 -39566792 - RLTR47_MM LTR ERV1 0 532 12 2 1200 1060 257 40 4 chr13 80717520 80717793 -39566519 + Lx4B LINE L1 6766 7048 -10 2 1200 411 38 0 0 chr13 80717793 80717846 -39566466 + (CATA)n Simple_repeat Simple_repeat 4 56 0 2 1200 367 133 0 48 chr13 80717850 80717866 -39566446 + ORR1C2 LTR MaLR 325 340 -44 2 1200 1194 156 35 193 chr13 80717866 80718352 -39565960 - RMER17C LTR ERVK 0 410 2 2 1200 367 133 0 48 chr13 80718352 80718398 -39565914 + ORR1C2 LTR MaLR 341 384 0 2 1200 12429 104 18 2 chr13 80718448 80721064 -39563248 - L1_Mus1 LINE L1 -1 6566 3902 2 1200 434 271 21 7 chr13 80721086 80721227 -39563085 - L1Md_F LINE L1 -5798 721 579 2 1200 319 263 44 66 chr13 80721285 80721475 -39562837 - L1VL1 LINE L1 -6037 385 95 2 1200 202 224 14 43 chr13 80722071 80722141 -39562171 + (TATATG)n Simple_repeat Simple_repeat 1 68 0 2 1200 255 61 0 0 chr13 80722413 80722446 -39561866 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2 1200 441 0 0 0 chr13 80723433 80723482 -39560830 + (GTTTG)n Simple_repeat Simple_repeat 1 49 0 2 1200 588 212 97 0 chr13 80723482 80723595 -39560717 - B1_Mur3 SINE Alu -13 136 13 2 1200 492 18 0 0 chr13 80723597 80723654 -39560658 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1200 2742 28 3 27 chr13 80724000 80724335 -39559977 + IAPLTR2b LTR ERVK 1 327 0 2 1200 448 248 64 0 chr13 80724775 80724900 -39559412 - Lx7 LINE L1 -3 7693 7561 2 1200 180 0 0 0 chr13 80724902 80724922 -39559390 + (CAAAA)n Simple_repeat Simple_repeat 4 23 0 2 1200 249 159 0 0 chr13 80724925 80724969 -39559343 + (CAA)n Simple_repeat Simple_repeat 2 45 0 2 1200 212 264 0 54 chr13 80724969 80725061 -39559251 + (CAGAGA)n Simple_repeat Simple_repeat 4 90 0 2 1200 327 279 16 42 chr13 80725318 80725422 -39558890 + PB1D10 SINE Alu 18 116 -1 2 1200 234 255 29 0 chr13 80725469 80725571 -39558741 + L1MA7 LINE L1 6186 6290 -1 2 1200 24 77 0 0 chr13 80725729 80725781 -39558531 + AT_rich Low_complexity Low_complexity 1 52 0 2 1200 4636 248 101 46 chr13 80725827 80727199 -39557113 - Lx6 LINE L1 -41 7419 5972 2 1200 2166 203 28 51 chr13 80727213 80727783 -39556529 + RLTR31_Mm LTR ERVK 1 557 -4 2 1200 2358 177 71 11 chr13 80727783 80728332 -39555980 - Lx6 LINE L1 -1502 5958 5377 2 1200 424 293 0 10 chr13 80728353 80728453 -39555859 - Lx8 LINE L1 -270 7203 7105 2 1200 987 249 50 17 chr13 80728455 80728696 -39555616 - ORR1C2 LTR MaLR 0 384 136 3 1200 812 208 27 38 chr13 80728734 80728967 -39555345 - ORR1C2 LTR MaLR -144 182 3 3 1200 1866 268 15 19 chr13 80728969 80729445 -39554867 - Lx8 LINE L1 -366 7107 6634 2 1200 456 300 39 0 chr13 80729673 80729803 -39554509 + MTC LTR MaLR 41 175 -246 3 1200 1734 149 65 55 chr13 80729803 80729968 -39554344 + RMER17C LTR ERVK 1 184 -226 3 1200 527 29 0 14 chr13 80729968 80730038 -39554274 + (TTC)n Simple_repeat Simple_repeat 3 71 0 3 1200 1734 149 65 55 chr13 80730038 80730270 -39554042 + RMER17C LTR ERVK 185 402 -8 3 1200 448 263 211 72 chr13 80730273 80730482 -39553830 + MTC LTR MaLR 167 404 -15 3 1200 240 369 15 69 chr13 80731058 80731189 -39553123 - LTR16D LTR ERVL -4 647 524 3 1200 14662 144 65 51 chr13 80731962 80733300 -39551012 + L1_Mur2 LINE L1 652 2062 -3815 3 1200 450 0 0 0 chr13 80733300 80733350 -39550962 + (GA)n Simple_repeat Simple_repeat 2 51 0 3 1200 14662 136 58 65 chr13 80733350 80735670 -39548642 + L1_Mur2 LINE L1 2063 4308 -1569 3 1200 6526 86 15 21 chr13 80735681 80736693 -39547619 + L1Md_Gf LINE L1 194 1300 -5427 3 18 33203 69 1 1 chr13 80736688 80741344 -39542968 + L1Md_F2 LINE L1 871 5589 -297 3 1201 8008 50 2 2 chr13 80741344 80742339 -39541973 + L1Md_F2 LINE L1 5590 6584 -1 3 1201 5921 148 59 16 chr13 80742345 80743475 -39540837 + L1_Mur2 LINE L1 4323 5501 -376 3 1201 3526 127 23 34 chr13 80743480 80744652 -39539660 - L1Md_F LINE L1 -4117 1766 184 3 1201 2005 276 38 7 chr13 80745856 80746575 -39537737 - Lx5 LINE L1 -18 7032 6456 3 1201 2969 75 5 0 chr13 80746571 80746958 -39537354 - L1_Mus4 LINE L1 -349 6287 5899 3 1201 2532 100 0 3 chr13 80746959 80747321 -39536991 + L1_Mus4 LINE L1 6266 6626 -10 3 1201 294 29 0 0 chr13 80747321 80747356 -39536956 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1201 198 0 0 0 chr13 80747402 80747424 -39536888 + (GA)n Simple_repeat Simple_repeat 1 22 0 3 1201 1717 238 124 30 chr13 80747428 80748085 -39536227 - Lx5 LINE L1 -655 6395 5654 3 1201 234 297 29 19 chr13 80751511 80751614 -39532698 + CT-rich Low_complexity Low_complexity 5 108 0 3 1201 24 32 0 0 chr13 80753127 80753158 -39531154 + AT_rich Low_complexity Low_complexity 1 31 0 3 1201 21 0 0 0 chr13 80753202 80753223 -39531089 + AT_rich Low_complexity Low_complexity 1 21 0 3 1201 21 0 0 0 chr13 80754254 80754275 -39530037 + AT_rich Low_complexity Low_complexity 1 21 0 3 1201 25 0 0 0 chr13 80756229 80756254 -39528058 + AT_rich Low_complexity Low_complexity 1 25 0 3 1201 22 0 0 0 chr13 80756777 80756799 -39527513 + AT_rich Low_complexity Low_complexity 1 22 0 3 1201 1714 143 40 7 chr13 80758685 80758987 -39525325 + Lx2 LINE L1 6686 6997 0 3 1201 480 333 52 5 chr13 80759080 80759291 -39525021 + Lx8 LINE L1 7115 7335 -138 3 1201 2462 114 117 17 chr13 80759331 80759741 -39524571 + L1_Mus4 LINE L1 6182 6632 -4 3 1201 234 295 0 37 chr13 80760352 80760433 -39523879 - RMER12 LTR ERVK -496 826 749 3 1201 381 315 126 22 chr13 80760498 80760680 -39523632 - Lx8 LINE L1 -145 7328 7128 3 1201 24 77 0 0 chr13 80761641 80761693 -39522619 + AT_rich Low_complexity Low_complexity 1 52 0 3 1201 538 242 85 15 chr13 80764093 80764223 -39520089 + B1_Mur4 SINE Alu 11 149 -1 3 1201 299 289 0 71 chr13 80764343 80764455 -39519857 - PB1D9 SINE Alu -15 105 2 3 1201 359 127 0 16 chr13 80764496 80764560 -39519752 + (TCCCC)n Simple_repeat Simple_repeat 4 66 0 3 1201 579 53 0 0 chr13 80764560 80764635 -39519677 + (TC)n Simple_repeat Simple_repeat 1 75 0 3 1201 985 140 215 0 chr13 80764782 80764968 -39519344 - Lx3B LINE L1 -151 6822 6597 3 1201 597 158 140 6 chr13 80764967 80765118 -39519194 + Lx3A LINE L1 6831 7000 0 3 1201 234 0 0 0 chr13 80765121 80765147 -39519165 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1201 2635 79 0 27 chr13 80765829 80766204 -39518108 + L1_Mus2 LINE L1 6202 6566 0 3 1201 429 344 51 48 chr13 80766706 80767076 -39517236 - MLT1A1 LTR MaLR -7 401 4 3 1201 256 264 0 0 chr13 80767702 80767755 -39516557 - B3A SINE B2 -119 79 27 3 1201 238 211 56 0 chr13 80767807 80767878 -39516434 + (TCTCTG)n Simple_repeat Simple_repeat 2 76 0 3 1201 491 45 15 0 chr13 80767879 80767945 -39516367 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1201 963 95 0 19 chr13 80768269 80768430 -39515882 + (TTTC)n Simple_repeat Simple_repeat 2 159 0 3 1201 218 231 0 0 chr13 80768430 80768473 -39515839 - PB1D7 SINE Alu -8 112 70 3 1201 275 241 64 18 chr13 80768975 80769085 -39515227 - Lx9 LINE L1 0 7644 7530 3 1201 278 200 20 20 chr13 80769115 80769166 -39515146 + B3A SINE B2 76 126 -72 3 1201 1554 290 18 18 chr13 80769444 80769894 -39514418 + Lx6 LINE L1 7007 7456 -4 3 1201 401 288 90 132 chr13 80770014 80770302 -39514010 - MLT1A LTR MaLR -17 357 82 3 1201 25392 90 155 10 chr13 80770520 80775315 -39508997 + L1Md_Gf LINE L1 221 5675 -211 3 1201 680 372 110 32 chr13 80775396 80776024 -39508288 - LTR82B Low_complexity ERVL -7 823 147 3 1201 195 333 30 0 chr13 80776778 80776844 -39507468 + L2a LINE L2 3326 3393 -33 3 1201 507 293 20 89 chr13 80777072 80777218 -39507094 + RSINE1 SINE B4 30 165 0 3 1201 290 289 0 26 chr13 80777450 80777528 -39506784 + ID4_ SINE ID 5 80 -3 3 1201 276 223 117 39 chr13 80778072 80778226 -39506086 - Lx9 LINE L1 0 7644 7479 3 1201 1336 247 28 37 chr13 80778485 80778992 -39505320 - Lx9 LINE L1 -1671 5973 5462 3 1201 246 283 65 42 chr13 80780959 80781221 -39503091 - Lx9 LINE L1 -19 7625 7358 3 1201 249 33 0 0 chr13 80781228 80781258 -39503054 + (TCTG)n Simple_repeat Simple_repeat 3 32 0 3 1201 470 305 155 38 chr13 80782729 80783097 -39501215 - Lx8 LINE L1 -9 7464 7054 3 1201 617 354 67 21 chr13 80783113 80783488 -39500824 - Lx7 LINE L1 -710 6986 6595 3 1201 40 83 0 0 chr13 80783546 80783642 -39500670 + AT_rich Low_complexity Low_complexity 1 96 0 3 1201 22 35 0 0 chr13 80789510 80789539 -39494773 + AT_rich Low_complexity Low_complexity 1 29 0 3 1201 185 132 0 26 chr13 80789587 80789626 -39494686 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 3 1201 26 74 0 0 chr13 80789733 80789787 -39494525 + AT_rich Low_complexity Low_complexity 1 54 0 3 1201 455 283 0 34 chr13 80790514 80790631 -39493681 - B1_Mur1 SINE Alu -35 114 2 3 1201 322 325 53 0 chr13 80790812 80790981 -39493331 + L1MA4A LINE L1 5760 5937 -366 3 1201 496 312 150 40 chr13 80793098 80793372 -39490940 - L2c LINE L2 -4 3383 3080 3 1201 513 0 0 0 chr13 80793756 80793813 -39490499 + (TC)n Simple_repeat Simple_repeat 1 57 0 3 1201 456 356 43 24 chr13 80794197 80794407 -39489905 - LTR33 LTR ERVL -296 219 6 3 1201 251 309 18 0 chr13 80794513 80794568 -39489744 + B4A SINE B4 42 97 -195 3 1201 671 330 0 25 chr13 80794610 80794812 -39489500 + B4A SINE B4 89 285 -7 3 1201 189 0 0 0 chr13 80794940 80794961 -39489351 + (TA)n Simple_repeat Simple_repeat 1 21 0 3 1201 391 287 163 11 chr13 80795765 80796025 -39488287 + L1MEc LINE L1 1962 2269 -4131 3 1201 553 276 83 19 chr13 80796026 80796292 -39488020 + L1MEc LINE L1 5138 5420 -899 3 1201 12167 204 19 147 chr13 80796317 80799542 -39484770 + L1VL4 LINE L1 554 2917 -2963 3 1201 351 0 0 0 chr13 80799542 80799581 -39484731 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 3 1201 13016 146 35 23 chr13 80799581 80801970 -39482342 + L1_Mm LINE L1 2916 5333 -550 3 1201 384 63 0 0 chr13 80801979 80802042 -39482270 + L1_Mus3 LINE L1 6574 6636 -2 3 1201 28 29 0 0 chr13 80802061 80802096 -39482216 + AT_rich Low_complexity Low_complexity 1 35 0 3 1201 4035 66 2 2 chr13 80802101 80802616 -39481696 - L1Md_F2 LINE L1 -4 6578 6064 3 1201 1680 181 34 0 chr13 80803166 80803491 -39480821 - Lx LINE L1 -1 6653 6318 3 1201 2702 138 5 0 chr13 80803501 80803929 -39480383 - L1_Mm LINE L1 -1021 4862 4433 3 1201 757 349 14 46 chr13 80804035 80804317 -39479995 + B4A SINE B4 20 292 0 3 1201 382 314 0 19 chr13 80804549 80804656 -39479656 - PB1D10 SINE Alu 0 117 13 3 1201 252 314 25 6 chr13 80804682 80804815 -39479497 - ID4 SINE ID -17 135 2 3 1201 243 191 0 73 chr13 80805384 80805480 -39478832 + T-rich Low_complexity Low_complexity 2 90 0 3 1201 230 291 18 0 chr13 80805481 80805536 -39478776 - ID4 SINE ID -13 70 15 3 1201 1106 311 63 13 chr13 80805660 80806054 -39478258 - MER70B LTR ERVL -147 431 18 3 1201 3011 234 30 28 chr13 80806301 80807022 -39477290 + RMER1C Other Other 618 1340 -2 3 1201 24 32 0 0 chr13 80807052 80807083 -39477229 + AT_rich Low_complexity Low_complexity 1 31 0 3 1201 450 53 0 0 chr13 80807518 80807575 -39476737 + (GGAA)n Simple_repeat Simple_repeat 1 57 0 3 1201 1085 62 21 0 chr13 80809103 80809247 -39475065 - B1_Mm SINE Alu 0 147 1 3 1201 5965 162 29 38 chr13 80809354 80810162 -39474150 - Lx2B LINE L1 -235 6765 5961 3 1201 226 189 0 0 chr13 80810162 80810199 -39474113 - tRNA-Ile-ATA tRNA tRNA -39 38 2 3 1201 5965 162 29 38 chr13 80810199 80810554 -39473758 - Lx2B LINE L1 -235 5960 5606 3 1201 33 25 0 0 chr13 80810933 80810973 -39473339 + AT_rich Low_complexity Low_complexity 1 40 0 3 1201 594 275 12 0 chr13 80811069 80811229 -39473083 + RSINE1 SINE B4 4 165 0 3 1201 874 166 3 9 chr13 80811673 80812003 -39472309 + (TGGA)n Simple_repeat Simple_repeat 1 327 0 3 1201 414 127 0 0 chr13 80812234 80812305 -39472007 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1201 2031 305 114 29 chr13 80812321 80813233 -39471079 - Lx8 LINE L1 -178 7295 6306 3 1201 38 0 0 0 chr13 80813308 80813346 -39470966 + AT_rich Low_complexity Low_complexity 1 38 0 3 1201 388 199 105 13 chr13 80813370 80813523 -39470789 - Lx9 LINE L1 -27 7617 7451 3 1201 336 64 0 0 chr13 80813539 80813586 -39470726 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1201 432 0 0 0 chr13 80813589 80813637 -39470675 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1201 1454 266 61 56 chr13 80813697 80813883 -39470429 + MTD LTR MaLR 6 209 -210 3 1201 1159 74 0 0 chr13 80813883 80814031 -39470281 + B1_Mus1 SINE Alu 1 148 0 3 1201 1454 266 61 56 chr13 80814031 80814255 -39470057 + MTD LTR MaLR 210 418 -1 3 1201 500 287 46 104 chr13 80814256 80814497 -39469815 + MTD-int LTR MaLR 1 227 -1031 3 1201 935 180 54 54 chr13 80814515 80814638 -39469674 + MTD LTR MaLR 165 288 -131 3 1201 2558 49 61 9 chr13 80814638 80814967 -39469345 - ORR1A1 LTR MaLR 0 346 1 3 1201 935 180 54 54 chr13 80814967 80815084 -39469228 + MTD LTR MaLR 289 405 -14 3 1201 236 130 22 0 chr13 80815114 80815160 -39469152 + (CATA)n Simple_repeat Simple_repeat 2 48 0 3 1201 2645 301 99 16 chr13 80815246 80816336 -39467976 - Lx9 LINE L1 -356 7288 6108 3 1201 575 346 15 20 chr13 80816446 80816641 -39467671 - B3 SINE B2 0 216 23 3 1201 557 299 99 67 chr13 80817553 80817836 -39466476 + B4 SINE B4 1 292 0 4 1201 575 181 75 138 chr13 80818114 80818274 -39466038 - RSINE1 SINE B4 -12 153 4 4 1201 1586 201 79 35 chr13 80818347 80818714 -39465598 + ORR1B1 LTR MaLR 4 386 -8 4 1201 355 52 0 33 chr13 80818909 80818969 -39465343 + (TTTA)n Simple_repeat Simple_repeat 1 58 0 4 1201 7327 54 30 7 chr13 80818969 80819586 -39464726 - L1_Mus2 LINE L1 -27 6539 5900 4 1201 3020 61 5 10 chr13 80819586 80819984 -39464328 - MTA_Mm LTR MaLR 0 396 1 4 1201 7327 77 29 12 chr13 80819984 80820578 -39463734 - L1_Mus2 LINE L1 -667 5899 5301 4 1201 4103 58 2 0 chr13 80820666 80821168 -39463144 - RLTR1C LTR ERV1 0 503 1 4 1201 7363 83 3 1 chr13 80821258 80822236 -39462076 + L1_Mus1 LINE L1 5587 6566 -1 4 1201 38544 6 0 1 chr13 80822340 80827932 -39456380 + L1Md_A LINE L1 1 5586 -297 4 1201 9046 1 0 0 chr13 80827932 80828928 -39455384 + L1Md_A LINE L1 5587 6582 0 4 1201 423 308 198 13 chr13 80830129 80830366 -39453946 + MamRep605 Unknown Unknown 468 748 -128 4 1201 228 306 24 0 chr13 80830957 80831042 -39453270 - Kanga1 DNA Tc2 -1652 93 7 4 1201 414 284 25 43 chr13 80831298 80831460 -39452852 + L1ME1 LINE L1 6021 6179 0 4 1201 390 269 16 65 chr13 80831976 80832099 -39452213 - RSINE1 SINE B4 -14 151 35 4 1201 389 20 0 20 chr13 80832224 80832275 -39452037 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1201 577 350 62 22 chr13 80832368 80832640 -39451672 - MLT1-int LTR MaLR -130 1241 959 4 1201 370 310 156 27 chr13 80833373 80833777 -39450535 + L1MB4 LINE L1 2008 2463 -3921 4 1201 601 243 67 11 chr13 80833970 80834253 -39450059 + L1MB4 LINE L1 2579 2877 -3505 4 1201 1848 155 24 85 chr13 80834605 80835015 -39449297 + RMER10B LTR ERVL 14 398 0 4 1201 336 255 98 89 chr13 80835148 80835406 -39448906 + MTEb LTR MaLR 97 374 -5 4 1201 368 323 35 13 chr13 80835410 80835642 -39448670 + L1MB4 LINE L1 3860 4096 -2286 4 1201 22 56 0 0 chr13 80837716 80837752 -39446560 + AT_rich Low_complexity Low_complexity 1 36 0 4 1201 189 0 0 0 chr13 80837830 80837851 -39446461 + (TTG)n Simple_repeat Simple_repeat 1 21 0 4 1201 238 290 127 18 chr13 80838909 80839074 -39445238 + L1MB4 LINE L1 5702 5884 -532 4 1201 752 309 80 88 chr13 80839076 80839449 -39444863 + MTE2a LTR MaLR 10 379 0 4 1201 246 282 78 106 chr13 80839455 80839737 -39444575 + L1MB4 LINE L1 5891 6164 -252 4 1201 632 333 5 45 chr13 80839774 80839997 -39444315 - MLT1A0 LTR MaLR -32 333 120 4 1201 3682 58 20 8 chr13 80840027 80840517 -39443795 + LTRIS2 LTR ERV1 69 564 0 4 1201 225 0 0 0 chr13 80840510 80840537 -39443775 + RLTR6_Mm LTR ERV1 613 639 -15 4 1201 1022 142 72 14 chr13 80840663 80840884 -39443428 + RLTR1B-int LTR ERV1 60 293 -3006 4 1201 905 152 61 17 chr13 80841229 80841410 -39442902 + RMER16-int LTR ERVK 142 330 -5076 4 1201 1492 134 92 15 chr13 80841395 80841668 -39442644 + RMER16-int LTR ERVK 683 976 -4430 4 1201 1495 177 23 33 chr13 80841657 80841961 -39442351 + RMER16-int LTR ERVK 1144 1444 -3962 4 1201 9027 128 130 47 chr13 80841952 80844475 -39439837 + RLTR1B-int LTR ERV1 760 3997 -1066 4 1201 915 209 51 0 chr13 80844691 80844926 -39439386 + RLTR1B-int LTR ERV1 4791 5037 -26 4 1201 3665 60 20 8 chr13 80844926 80845416 -39438896 + LTRIS2 LTR ERV1 69 564 0 4 1201 733 256 26 0 chr13 80845624 80845780 -39438532 - B3A SINE B2 -38 160 1 4 1201 1308 103 0 0 chr13 80845826 80846001 -39438311 + B2_Mm2 SINE B2 2 176 -19 4 1201 213 159 0 0 chr13 80847320 80847364 -39436948 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1201 408 344 70 26 chr13 80847556 80847783 -39436529 + MIR SINE MIR 12 248 -14 4 1201 419 224 59 74 chr13 80852303 80852438 -39431874 + B2_Mm2 SINE B2 63 195 0 4 1201 438 303 63 126 chr13 80853457 80853520 -39430792 - B4A SINE B4 0 292 231 4 1201 189 0 0 0 chr13 80853520 80853541 -39430771 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1201 438 303 63 126 chr13 80853541 80853715 -39430597 - B4A SINE B4 -62 230 70 4 1201 351 273 20 10 chr13 80853721 80853821 -39430491 - B4A SINE B4 -188 104 4 4 1201 460 158 35 92 chr13 80854180 80854354 -39429958 - Lx9 LINE L1 0 7644 7481 4 1201 342 183 0 0 chr13 80854355 80854426 -39429886 + (TG)n Simple_repeat Simple_repeat 2 72 0 4 1201 560 191 221 11 chr13 80854427 80854617 -39429695 - Lx9 LINE L1 -132 7512 7283 4 1201 748 219 78 47 chr13 80854650 80854842 -39429470 - B3A SINE B2 0 198 1 4 1201 21 0 0 0 chr13 80854993 80855014 -39429298 + AT_rich Low_complexity Low_complexity 1 21 0 4 1201 1121 54 0 39 chr13 80855057 80855210 -39429102 + B1_Mus1 SINE Alu 1 147 -1 4 1201 315 0 0 0 chr13 80855491 80855526 -39428786 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 1201 237 33 0 0 chr13 80857074 80857104 -39427208 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1201 242 310 123 7 chr13 80857131 80857277 -39427035 + Kanga1d DNA Tc2 237 399 -210 4 1201 2291 208 21 19 chr13 80857290 80857814 -39426498 - RLTR11A2 LTR ERVK -1 526 2 4 1201 21 0 0 0 chr13 80857925 80857946 -39426366 + AT_rich Low_complexity Low_complexity 1 21 0 4 1201 284 130 0 0 chr13 80858462 80858508 -39425804 - L1_Mm LINE L1 -3537 2346 2301 4 1201 29 47 0 0 chr13 80859148 80859191 -39425121 + AT_rich Low_complexity Low_complexity 1 43 0 4 1201 261 0 0 0 chr13 80859362 80859391 -39424921 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1201 373 333 18 36 chr13 80859464 80859576 -39424736 + PB1D10 SINE Alu 1 110 -7 4 1201 305 298 143 37 chr13 80860937 80861209 -39423103 - L1ME3B LINE L1 -191 6049 5749 4 1201 256 306 16 0 chr13 80861239 80861301 -39423011 - tRNA-Ala-GCY_ tRNA tRNA -9 66 4 4 1201 304 307 78 0 chr13 80861378 80861531 -39422781 - L1ME3B LINE L1 -526 5714 5550 4 1201 1147 75 0 0 chr13 80861653 80861800 -39422512 + B1_Mus1 SINE Alu 2 148 0 4 1201 875 170 0 12 chr13 80861800 80861973 -39422339 + GA-rich Low_complexity Low_complexity 2 172 0 4 1201 318 296 0 0 chr13 80861974 80862045 -39422267 + RSINE1 SINE B4 73 143 -22 4 1201 423 0 0 0 chr13 80862058 80862105 -39422207 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1201 279 104 0 0 chr13 80862105 80862153 -39422159 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1201 24 0 0 0 chr13 80862153 80862177 -39422135 + AT_rich Low_complexity Low_complexity 1 24 0 4 1201 506 294 93 104 chr13 80862449 80862813 -39421499 - RLTR9A LTR ERVK -8 360 1 4 1201 256 279 113 8 chr13 80863254 80863511 -39420801 - L1ME3B LINE L1 -1508 4638 4355 4 1201 315 298 92 39 chr13 80863782 80863995 -39420317 - L1ME3B LINE L1 -2091 4055 3826 4 1201 302 138 17 0 chr13 80864237 80864295 -39420017 + L1_Mur3 LINE L1 4869 4927 -953 4 1201 372 361 81 18 chr13 80864598 80864931 -39419381 - Lx8 LINE L1 -109 7364 7011 4 1201 278 287 98 54 chr13 80864956 80865048 -39419264 - B1F1 SINE Alu -49 101 5 4 1201 351 169 214 0 chr13 80865309 80865398 -39418914 + B1F2 SINE Alu 35 142 -7 4 1201 708 321 5 23 chr13 80865623 80865843 -39418469 + B3 SINE B2 1 216 0 4 1201 1180 170 113 3 chr13 80866110 80866394 -39417918 - Lx2B LINE L1 -713 6287 5973 4 1201 3429 207 28 7 chr13 80866394 80867086 -39417226 + Lx2B LINE L1 6293 6998 -2 4 1201 21 36 0 0 chr13 80868939 80868967 -39415345 + AT_rich Low_complexity Low_complexity 1 28 0 4 1201 360 276 64 45 chr13 80869232 80869342 -39414970 + ID_B1 SINE B4 104 215 -9 4 1201 189 0 0 0 chr13 80869347 80869368 -39414944 + (CAGA)n Simple_repeat Simple_repeat 2 22 0 4 1201 3307 5 0 0 chr13 80869438 80869807 -39414505 + L1Md_T LINE L1 6214 6582 0 4 1201 387 224 0 0 chr13 80869807 80869892 -39414420 - Lx7 LINE L1 -437 7259 7175 4 1201 333 341 51 45 chr13 80870481 80870659 -39413653 + B4A SINE B4 106 284 -8 4 1202 2757 178 84 37 chr13 80872290 80872919 -39411393 - RMER1B Other Other -1 1065 407 4 1202 238 352 0 0 chr13 80872985 80873056 -39411256 + B1F2 SINE Alu 13 83 -66 4 1202 313 290 11 0 chr13 80873074 80873167 -39411145 + RMER1B Other Other 468 561 -505 4 1202 320 226 0 0 chr13 80873172 80873234 -39411078 + B1_Mur1 SINE Alu 80 141 -8 4 1202 324 103 0 0 chr13 80873454 80873512 -39410800 + (TC)n Simple_repeat Simple_repeat 1 58 0 4 1202 384 22 0 0 chr13 80873512 80873557 -39410755 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1202 359 340 0 0 chr13 80873933 80874027 -39410285 + PB1D10 SINE Alu 17 110 -7 4 1202 452 262 40 24 chr13 80874245 80874370 -39409942 + ID_B1 SINE B4 98 224 0 4 1202 938 126 17 11 chr13 80874381 80874558 -39409754 + G-rich Low_complexity Low_complexity 3 180 0 4 1202 1452 44 0 0 chr13 80874559 80874739 -39409573 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 4 1202 185 331 90 35 chr13 80875055 80875199 -39409113 - L2 LINE L2 -597 2822 2671 4 1202 874 239 11 11 chr13 80875642 80875820 -39408492 + B3 SINE B2 30 207 -9 4 1202 396 307 107 30 chr13 80875985 80876247 -39408065 - L1MC LINE L1 -2344 5538 5257 4 1202 814 300 112 24 chr13 80876371 80876702 -39407610 - MTE2a LTR MaLR 0 379 20 4 1202 22 0 0 0 chr13 80876714 80876736 -39407576 + AT_rich Low_complexity Low_complexity 1 22 0 4 1202 369 306 31 98 chr13 80878523 80878748 -39405564 - ID_B1 SINE B4 -12 212 3 4 1202 213 318 23 23 chr13 80878876 80878963 -39405349 - L4 LINE RTE -181 1848 1762 4 1202 269 322 86 65 chr13 80879011 80879197 -39405115 + MLT1D LTR MaLR 312 501 -4 4 1202 287 294 133 73 chr13 80881510 80881675 -39402637 + B4A SINE B4 118 292 0 4 1202 325 321 27 18 chr13 80883994 80884105 -39400207 - MER5A1 DNA MER1_type 0 166 55 4 1202 207 0 0 0 chr13 80884155 80884178 -39400134 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 4 1202 243 302 0 16 chr13 80884762 80884826 -39399486 + tRNA-Ala-GCY_ tRNA tRNA 6 68 -7 4 1202 227 383 39 15 chr13 80884764 80884894 -39399418 + B4 SINE B4 14 146 -146 4 1202 218 250 0 0 chr13 80884922 80884966 -39399346 + GA-rich Low_complexity Low_complexity 3 46 0 4 1202 330 26 0 0 chr13 80885223 80885262 -39399050 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 4 1202 636 97 0 0 chr13 80886367 80886460 -39397852 + (CA)n Simple_repeat Simple_repeat 2 94 0 4 1202 226 37 0 137 chr13 80886573 80886668 -39397644 + (TATTG)n Simple_repeat Simple_repeat 2 83 0 4 1202 805 321 26 7 chr13 80887843 80888113 -39396199 - Lx9 LINE L1 -725 6919 6645 4 1202 22 56 0 0 chr13 80888226 80888262 -39396050 + AT_rich Low_complexity Low_complexity 1 36 0 4 1202 1024 269 162 18 chr13 80888306 80888795 -39395517 + Lx9 LINE L1 7086 7644 0 4 1202 1005 69 0 47 chr13 80888839 80889057 -39395255 + (GGAA)n Simple_repeat Simple_repeat 1 207 0 5 1202 3936 168 16 105 chr13 80889560 80890550 -39393762 + RLTR13D6 LTR ERVK 1 902 0 5 1202 359 260 54 142 chr13 80890672 80890820 -39393492 + B4A SINE B4 158 292 0 5 1202 306 0 0 0 chr13 80890821 80890855 -39393457 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1202 336 48 0 0 chr13 80890924 80890966 -39393346 + (TGG)n Simple_repeat Simple_repeat 3 44 0 5 1202 368 327 36 89 chr13 80891411 80891579 -39392733 - RSINE1 SINE B4 -2 163 5 5 1202 312 250 120 0 chr13 80891676 80891768 -39392544 - PB1D9 SINE Alu -10 110 8 5 1202 262 263 281 58 chr13 80891768 80891797 -39392515 - ID_B1 SINE B4 -10 214 67 5 1202 409 243 44 7 chr13 80891825 80891962 -39392350 - Lx9 LINE L1 -1 7643 7502 5 1202 240 35 0 0 chr13 80891966 80891995 -39392317 + (CATA)n Simple_repeat Simple_repeat 1 29 0 5 1202 542 292 63 15 chr13 80892632 80892837 -39391475 + MLT1D LTR MaLR 288 502 -3 5 1202 201 229 0 0 chr13 80893392 80893440 -39390872 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1202 25 0 0 0 chr13 80893610 80893635 -39390677 + AT_rich Low_complexity Low_complexity 1 25 0 5 1202 342 0 0 0 chr13 80893688 80893726 -39390586 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1202 27 0 0 0 chr13 80897333 80897360 -39386952 + AT_rich Low_complexity Low_complexity 1 27 0 5 1202 610 160 9 45 chr13 80898086 80898197 -39386115 - B1_Mus2 SINE Alu 0 147 41 5 1202 763 248 72 44 chr13 80898148 80898397 -39385915 - B4A SINE B4 -20 272 17 5 1202 399 21 0 0 chr13 80898398 80898446 -39385866 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1202 234 0 0 0 chr13 80898446 80898471 -39385841 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1202 7677 128 93 7 chr13 80898484 80900135 -39384177 - Lx2 LINE L1 0 6997 5200 5 1202 4582 104 18 14 chr13 80900133 80900873 -39383439 - L1VL4 LINE L1 -1668 1891 1149 5 1202 2128 60 0 0 chr13 80900871 80901137 -39383175 - L1Md_F2 LINE L1 -246 6336 6071 5 1202 1379 126 8 21 chr13 80901138 80901374 -39382938 + L1Md_F2 LINE L1 6348 6580 -2 5 1202 5464 111 9 2 chr13 80901374 80902366 -39381946 - L1VL4 LINE L1 -2397 1162 190 5 1202 240 377 28 19 chr13 80902408 80902423 -39381889 + ID SINE ID 68 83 -141 5 1202 277 321 71 27 chr13 80902423 80902535 -39381777 + PB1D10 SINE Alu 1 117 0 5 1202 740 359 89 16 chr13 80902585 80903070 -39381242 - MT2A LTR ERVL 0 533 14 5 1202 495 292 184 20 chr13 80903653 80904006 -39380306 - Lx8 LINE L1 -5 7468 7058 5 1202 495 78 0 0 chr13 80905305 80905382 -39378930 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1202 330 239 92 104 chr13 80905746 80905919 -39378393 + Lx8 LINE L1 7286 7456 -17 5 1202 1675 51 0 14 chr13 80906231 80906490 -39377822 - L1Md_F3 LINE L1 0 6584 6353 5 1202 429 321 27 0 chr13 80906746 80906858 -39377454 - PB1D7 SINE Alu 0 120 6 5 1202 284 360 12 0 chr13 80906783 80906869 -39377443 - B4 SINE B4 -126 166 80 5 1202 230 329 13 0 chr13 80906968 80907047 -39377265 - MLT2E LTR ERVL -9 554 475 5 1202 23 0 0 0 chr13 80907125 80907148 -39377164 + AT_rich Low_complexity Low_complexity 1 23 0 5 1202 1520 210 39 18 chr13 80907198 80907528 -39376784 - ORR1D1 LTR MaLR -3 371 35 5 1202 244 270 40 0 chr13 80907561 80907635 -39376677 + ID2 SINE ID 1 77 -6 5 1202 236 195 0 0 chr13 80908380 80908421 -39375891 - PB1D9 SINE Alu -69 51 11 5 1202 684 284 20 2 chr13 80908954 80909145 -39375167 + B3A SINE B2 15 209 -7 5 1202 887 233 125 75 chr13 80909642 80910027 -39374285 - RLTR9E LTR ERVK 0 409 6 5 1202 25578 139 15 12 chr13 80910042 80915858 -39368454 + L1_Mus4 LINE L1 598 6635 -1 5 1202 4859 129 11 4 chr13 80915872 80916621 -39367691 + Lx3B LINE L1 6218 6971 -2 5 1202 26 0 0 0 chr13 80916629 80916655 -39367657 + AT_rich Low_complexity Low_complexity 1 26 0 5 1202 3177 203 20 21 chr13 80916726 80917390 -39366922 + RMER1C Other Other 378 1340 -2 5 1202 549 0 0 0 chr13 80917409 80917470 -39366842 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1202 2071 133 33 79 chr13 80917471 80917863 -39366449 - RLTR14 LTR ERV1 -2 380 7 5 1202 492 18 0 0 chr13 80917881 80917938 -39366374 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1202 439 285 101 7 chr13 80917942 80918080 -39366232 - B3A SINE B2 -47 151 1 5 1202 351 0 0 0 chr13 80918198 80918237 -39366075 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1202 877 202 41 18 chr13 80918737 80918908 -39365404 + B3 SINE B2 38 212 -4 5 1202 497 335 43 32 chr13 80920418 80920606 -39363706 + B4A SINE B4 60 249 -43 5 1202 570 114 0 0 chr13 80920619 80920707 -39363605 + (CA)n Simple_repeat Simple_repeat 1 88 0 5 1202 7939 118 44 32 chr13 80920811 80922898 -39361414 + L1VL2 LINE L1 61 2185 -1430 5 1202 746 144 8 0 chr13 80922895 80923027 -39361285 + L1VL2 LINE L1 3041 3173 -442 5 1202 322 323 29 41 chr13 80923082 80923253 -39361059 - L1M5 LINE L1 -513 5727 5559 5 1202 411 160 0 0 chr13 80923259 80923334 -39360978 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1202 290 354 50 0 chr13 80923440 80923539 -39360773 - MER81 DNA AcHobo -10 104 1 5 1202 1190 27 0 7 chr13 80924684 80924832 -39359480 - L1Md_F2 LINE L1 -513 6071 5925 5 1202 3978 39 27 0 chr13 80924832 80925318 -39358994 + L1Md_F2 LINE L1 6072 6570 -12 5 1202 369 270 33 22 chr13 80926110 80926201 -39358111 - PB1D10 SINE Alu -25 92 1 5 1202 536 231 99 0 chr13 80926574 80926695 -39357617 - B1_Mus1 SINE Alu -6 142 10 5 1202 260 318 15 15 chr13 80926735 80926802 -39357510 + ID4 SINE ID 15 81 -2 5 1202 761 229 24 1 chr13 80926882 80927056 -39357256 + B3 SINE B2 11 197 -1 5 1202 34 55 0 0 chr13 80927150 80927205 -39357107 + AT_rich Low_complexity Low_complexity 1 55 0 5 1202 202 312 25 0 chr13 80928467 80928547 -39355765 - MIRb SINE MIR -34 234 153 5 1202 444 266 76 0 chr13 80928759 80928893 -39355419 - B1F SINE Alu 0 149 1 5 1202 22 0 0 0 chr13 80929529 80929551 -39354761 + AT_rich Low_complexity Low_complexity 1 22 0 5 1202 1473 135 46 0 chr13 80929735 80929994 -39354318 - L1_Mur2 LINE L1 -1646 4231 3961 5 1202 228 323 57 57 chr13 80929995 80930100 -39354212 - MTC LTR MaLR -316 105 1 5 1202 312 154 2 2 chr13 80930100 80930157 -39354155 - MTC-int LTR MaLR -7 1251 1201 5 1202 2057 64 384 2 chr13 80930157 80930346 -39353966 - L1_Mus4 LINE L1 -517 6121 5858 5 1202 432 0 0 0 chr13 80930346 80930394 -39353918 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1202 216 0 0 0 chr13 80930394 80930417 -39353895 + (GA)n Simple_repeat Simple_repeat 1 24 0 5 1202 2791 104 51 4 chr13 80930417 80930841 -39353471 - L1_Mus4 LINE L1 -779 5857 5420 5 1202 3510 85 16 2 chr13 80930841 80931327 -39352985 + L1_Mus3 LINE L1 6145 6637 -1 5 1202 226 290 0 14 chr13 80931335 80931405 -39352907 - MTC-int LTR MaLR -42 1216 1148 5 1202 2120 136 52 24 chr13 80932105 80932488 -39351824 + ORR1B1 LTR MaLR 1 394 0 5 1202 2516 209 48 22 chr13 80932491 80933073 -39351239 + ORR1B1-int LTR MaLR 8 649 -860 5 1202 554 267 70 49 chr13 80933073 80933195 -39351117 + B1_Mus2 SINE Alu 3 118 -29 5 1202 207 0 0 0 chr13 80933195 80933218 -39351094 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1202 554 267 70 49 chr13 80933218 80933237 -39351075 + B1_Mus2 SINE Alu 119 147 0 5 1202 771 130 0 0 chr13 80933237 80933360 -39350952 + (GAAAA)n Simple_repeat Simple_repeat 4 126 0 5 1202 2884 196 55 107 chr13 80933360 80934126 -39350186 + ORR1B1-int LTR MaLR 784 1509 0 5 1202 1742 190 89 6 chr13 80934130 80934490 -39349822 + ORR1B1 LTR MaLR 5 394 0 5 1202 930 293 65 114 chr13 80934614 80935265 -39349047 - MTC-int LTR MaLR -279 1301 627 5 1202 431 170 107 29 chr13 80935261 80935364 -39348948 - MTC-int LTR MaLR -904 354 244 5 1202 2119 212 9 7 chr13 80935370 80935803 -39348509 - Lx5 LINE L1 -1 7049 6616 5 1202 1044 193 15 43 chr13 80935804 80936070 -39348242 - RMER19C LTR ERVK -2 900 409 5 1202 279 321 142 32 chr13 80936455 80936645 -39347667 - AmnSINE1 SINE SINE -159 416 206 5 1202 1400 240 73 13 chr13 80936875 80936994 -39347318 + MTC LTR MaLR 1 132 -289 5 1202 215 0 0 62 chr13 80936994 80937026 -39347286 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 5 1202 1400 240 73 13 chr13 80937026 80937303 -39347009 + MTC LTR MaLR 133 420 -1 5 1202 226 318 0 16 chr13 80937385 80937449 -39346863 + ID4_ SINE ID 4 66 -17 5 1202 324 376 27 7 chr13 80937457 80937607 -39346705 + ORR1E LTR MaLR 4 156 -203 5 1202 272 109 0 42 chr13 80937724 80937772 -39346540 + L1MB3 LINE L1 6112 6157 -26 5 1202 285 216 26 26 chr13 80938838 80938914 -39345398 - MLT1F2 LTR MaLR -7 553 478 5 1202 1398 310 105 24 chr13 80939479 80940117 -39344195 + Lx8 LINE L1 6595 7284 -189 5 1202 820 259 156 80 chr13 80940121 80940595 -39343717 - RMER20B LTR ERVK -20 607 98 5 1202 315 335 37 80 chr13 80940797 80940959 -39343353 - MTE2b LTR MaLR -167 212 58 5 1202 926 138 48 0 chr13 80940996 80941141 -39343171 - Lx6 LINE L1 -1083 6377 6226 5 1202 3004 249 62 43 chr13 80941039 80941924 -39342388 + Lx7 LINE L1 6296 7197 -499 5 1202 3935 208 70 14 chr13 80941951 80943201 -39341111 + Lx6 LINE L1 859 2190 -3690 5 1202 2546 197 13 17 chr13 80943201 80943727 -39340585 + RLTR11A LTR ERVK 5 528 0 5 1202 2556 188 86 14 chr13 80943727 80943849 -39340463 + Lx6 LINE L1 2191 2312 -3568 5 1202 6638 188 51 20 chr13 80943858 80945478 -39338834 + Lx6 LINE L1 3754 5457 -843 5 1202 272 227 12 85 chr13 80945453 80945535 -39338777 + Lx6 LINE L1 5619 5694 -1766 5 1202 517 249 201 0 chr13 80945530 80945719 -39338593 - Lx6 LINE L1 -677 6783 6557 5 1202 1433 272 33 30 chr13 80945721 80946149 -39338163 + Lx6 LINE L1 6977 7405 -55 5 1202 307 191 0 16 chr13 80946304 80946368 -39337944 - MTE2b LTR MaLR -316 63 1 5 1202 741 180 57 7 chr13 80946757 80946897 -39337415 + B1_Mus1 SINE Alu 1 147 -1 5 1202 38 51 0 0 chr13 80947085 80947144 -39337168 + AT_rich Low_complexity Low_complexity 1 59 0 5 1202 421 118 219 8 chr13 80947145 80947273 -39337039 - Lx9 LINE L1 -1 7643 7489 5 1202 1058 201 11 54 chr13 80947280 80947449 -39336863 + Lx9 LINE L1 6814 6980 -664 5 1202 1261 255 59 14 chr13 80947449 80947807 -39336505 + ORR1D1 LTR MaLR 1 374 0 5 1202 1058 201 11 54 chr13 80947807 80947915 -39336397 + Lx9 LINE L1 6981 7079 -565 5 1202 1330 199 142 20 chr13 80948710 80949016 -39335296 + ORR1B1 LTR MaLR 1 318 -76 5 1202 3708 187 21 9 chr13 80949017 80949691 -39334621 + RLTR17 LTR ERVK 11 692 0 5 1202 287 113 0 86 chr13 80949691 80949740 -39334572 + ORR1B1 LTR MaLR 314 357 -27 5 1202 6627 122 18 3 chr13 80949740 80951488 -39332824 - L1_Mus4 LINE L1 -5 6631 4862 5 1202 4516 119 20 131 chr13 80951492 80952508 -39331804 - RMER17A2 LTR ERVK -3 903 1 5 1202 4863 150 19 10 chr13 80952508 80953405 -39330907 - L1_Mus4 LINE L1 -1016 4867 3963 5 1202 4146 144 16 14 chr13 80953402 80954970 -39329342 - L1VL4 LINE L1 -290 3269 204 5 1202 247 81 0 0 chr13 80955080 80955117 -39329195 + ORR1B1 LTR MaLR 356 392 -2 5 1202 6496 201 40 23 chr13 80955119 80956602 -39327710 + ORR1B1-int LTR MaLR 1 1509 0 5 1202 2347 146 12 50 chr13 80956602 80957005 -39327307 + ORR1B1 LTR MaLR 1 388 -6 5 1202 290 393 52 27 chr13 80957200 80957605 -39326707 + MLT1F-int LTR MaLR 7 421 -1068 6 1202 296 183 82 55 chr13 80957646 80957756 -39326556 - L1MB7 LINE L1 -1 6183 6071 6 1202 420 338 89 30 chr13 80957900 80958272 -39326040 + MLT1F-int LTR MaLR 470 863 -626 6 1202 268 320 0 0 chr13 80958503 80958581 -39325731 + ID4 SINE ID 2 79 -4 6 1202 3332 151 54 35 chr13 80958892 80959522 -39324790 + RLTR26 LTR ERVK 1 642 0 6 1202 273 347 83 12 chr13 80959566 80959735 -39324577 + MLT1H-int LTR MaLR 751 931 -478 6 1202 216 0 0 0 chr13 80960062 80960086 -39324226 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1202 468 0 0 0 chr13 80960086 80960137 -39324175 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 1202 877 272 60 33 chr13 80960287 80960622 -39323690 - Lx8 LINE L1 -414 7059 6716 6 1202 862 183 170 4 chr13 80960648 80960757 -39323555 - Lx9 LINE L1 -7 7637 7519 6 1202 297 0 0 0 chr13 80960757 80960790 -39323522 + (GA)n Simple_repeat Simple_repeat 1 33 0 6 1202 862 183 170 4 chr13 80960790 80960927 -39323385 - Lx9 LINE L1 -126 7518 7350 6 1202 864 242 133 124 chr13 80961128 80961460 -39322852 - MT2B LTR ERVL -64 537 67 6 1202 351 0 0 0 chr13 80961460 80961499 -39322813 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1202 577 238 148 144 chr13 80961499 80961570 -39322742 - MT2B LTR ERVL -467 66 3 6 1202 458 260 27 20 chr13 80961704 80961853 -39322459 - Lx8 LINE L1 -1008 6465 6316 6 1202 230 361 0 0 chr13 80961880 80961941 -39322371 + MLT1H-int LTR MaLR 1239 1299 -110 6 1202 636 216 0 0 chr13 80962072 80962183 -39322129 - RMER5 LTR ERV1 -217 317 207 6 1202 989 250 11 0 chr13 80962384 80962572 -39321740 + B3 SINE B2 17 206 -10 6 1202 1579 191 42 37 chr13 80963076 80963484 -39320828 - RMER17C LTR ERVK 0 410 1 6 1202 24 32 0 0 chr13 80963839 80963870 -39320442 + AT_rich Low_complexity Low_complexity 1 31 0 6 1202 200 411 34 0 chr13 80964564 80964710 -39319602 - MIRb SINE MIR -104 164 14 6 1202 207 133 0 0 chr13 80964836 80964881 -39319431 + (A)n Simple_repeat Simple_repeat 1 45 0 6 1202 474 385 16 0 chr13 80965230 80965412 -39318900 + MER5A DNA MER1_type 5 189 0 6 1202 217 364 0 0 chr13 80967235 80967312 -39317000 - ID4_ SINE ID -1 82 6 6 1202 399 276 9 19 chr13 80967988 80968095 -39316217 + (TATG)n Simple_repeat Simple_repeat 3 108 0 6 1202 446 259 6 0 chr13 80968097 80968267 -39316045 + (TG)n Simple_repeat Simple_repeat 2 172 0 6 1202 532 250 25 0 chr13 80968326 80968446 -39315866 - B3 SINE B2 -90 126 4 6 1202 257 353 112 39 chr13 80968453 80968686 -39315626 - Lx8 LINE L1 -146 7327 7078 6 1202 556 156 101 0 chr13 80969787 80969896 -39314416 + RLTR47_MM LTR ERV1 1 120 -412 6 1202 9064 70 16 7 chr13 80969909 80971210 -39313102 - L1_Mus2 LINE L1 -2 6564 5248 6 1202 483 33 0 0 chr13 80971210 80971271 -39313041 + (TA)n Simple_repeat Simple_repeat 2 62 0 6 1202 9064 112 19 19 chr13 80971271 80972136 -39312176 - L1_Mus2 LINE L1 -636 5247 4388 6 1202 333 68 0 0 chr13 80972140 80972184 -39312128 + (GA)n Simple_repeat Simple_repeat 2 45 0 6 1202 5379 124 11 105 chr13 80972184 80973760 -39310552 + L1_Mm LINE L1 3652 4902 -978 6 1202 31934 77 3 4 chr13 80973761 80978929 -39305383 + L1Md_F2 LINE L1 446 5586 -297 6 1202 7845 57 10 0 chr13 80978930 80979902 -39304410 + L1Md_F2 LINE L1 5588 6569 -13 6 1202 5098 156 18 8 chr13 80980084 80981117 -39303195 + Lx6 LINE L1 4920 5963 -1497 6 1202 26 0 0 0 chr13 80981126 80981152 -39303160 + AT_rich Low_complexity Low_complexity 1 26 0 6 1202 3165 164 68 8 chr13 80981186 80981787 -39302525 - RLTR17 LTR ERVK -55 637 1 6 1202 359 244 67 8 chr13 80981788 80981908 -39302404 + Lx6 LINE L1 5961 6087 -1373 6 1202 396 136 0 0 chr13 80981975 80982041 -39302271 + L1VL2 LINE L1 161 226 -6109 6 1202 2210 136 274 6 chr13 80982041 80982508 -39301804 + L1VL2 LINE L1 308 899 -5735 6 1202 3803 114 30 67 chr13 80982542 80983306 -39301006 - RMER17A LTR ERVK -15 736 1 6 1202 11314 188 62 89 chr13 80983307 80986275 -39298037 + L1VL2 LINE L1 895 3947 -1939 6 1202 674 185 77 26 chr13 80986275 80986430 -39297882 + RMER19C LTR ERVK 447 609 -2 6 1202 11314 188 62 89 chr13 80986430 80986563 -39297749 + L1VL2 LINE L1 3948 4085 -1801 6 1202 243 0 0 0 chr13 80986563 80986590 -39297722 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1202 414 0 0 0 chr13 80986590 80986635 -39297677 + (TA)n Simple_repeat Simple_repeat 2 47 0 6 1202 11314 204 67 101 chr13 80986635 80987914 -39296398 + L1VL2 LINE L1 4086 5294 -592 6 1202 21103 126 20 21 chr13 80987931 80988358 -39295954 + Lx3C LINE L1 2124 2550 -3336 6 1202 247 182 0 0 chr13 80988358 80988402 -39295910 - U2 snRNA snRNA -144 44 1 6 1202 21103 126 20 21 chr13 80988402 80989220 -39295092 + Lx3C LINE L1 2551 3371 -2515 6 1202 531 0 0 0 chr13 80989220 80989279 -39295033 + (TTTTG)n Simple_repeat Simple_repeat 3 61 0 6 1202 1038 60 15 0 chr13 80989279 80989412 -39294900 - B1_Mus1 SINE Alu -12 136 2 6 1202 21103 126 20 21 chr13 80989412 80990239 -39294073 + Lx3C LINE L1 3372 4201 -1685 6 1202 1548 48 0 11 chr13 80990239 80990430 -39293882 + B2_Mm1a SINE B2 2 190 -3 6 1202 21103 122 43 11 chr13 80990430 80993084 -39291228 + Lx3C LINE L1 4202 6973 -3 6 1202 4564 231 13 56 chr13 80993109 80994318 -39289994 + Lx5 LINE L1 5894 7050 0 6 1202 321 26 0 0 chr13 80994320 80994358 -39289954 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 6 1202 6086 84 11 7 chr13 80995209 80995574 -39288738 - L1_Mus1 LINE L1 -1 6566 6195 6 1202 3279 46 5 0 chr13 80995574 80995968 -39288344 + MTA_Mm LTR MaLR 1 396 0 6 1202 6086 84 11 7 chr13 80995968 80996472 -39287840 - L1_Mus1 LINE L1 -373 6194 5693 6 1202 393 364 54 14 chr13 80996558 80996781 -39287531 - Cheshire DNA MER1_type -2170 250 19 6 1202 2175 104 15 42 chr13 80996782 80997114 -39287198 + ORR1A2 LTR MaLR 1 323 -4 6 1202 8623 153 71 24 chr13 80997119 80997643 -39286669 + ORR1A2-int LTR MaLR 2 537 -1255 6 1202 4357 102 70 60 chr13 80997643 80998444 -39285868 + RMER17D2 LTR ERVK 1 809 0 6 1202 8623 153 71 24 chr13 80998444 80998690 -39285622 + ORR1A2-int LTR MaLR 538 855 -937 6 1202 909 0 0 0 chr13 80998690 80998791 -39285521 + (GAA)n Simple_repeat Simple_repeat 1 101 0 6 1202 8623 153 71 24 chr13 80998791 80999729 -39284583 + ORR1A2-int LTR MaLR 856 1792 0 6 1202 1741 96 4 74 chr13 80999729 81000000 -39284312 + ORR1A2 LTR MaLR 1 252 -75 6 1202 481 79 0 15 chr13 81000000 81000080 -39284232 + ORR1A2 LTR MaLR 253 384 0 1 1202 269 59 0 0 chr13 81000383 81000417 -39283895 - Lx3C LINE L1 -666 6310 6277 2 1202 1041 193 10 5 chr13 81000417 81000615 -39283697 + RLTR14 LTR ERV1 139 337 -45 3 1202 420 71 0 0 chr13 81000615 81000671 -39283641 + (TAAA)n Simple_repeat Simple_repeat 4 59 0 4 1202 234 215 0 37 chr13 81000681 81000763 -39283549 + Lx8 LINE L1 7394 7472 -1 5 1202 206 57 0 54 chr13 81001730 81001767 -39282545 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1202 535 196 84 0 chr13 81001769 81001876 -39282436 - B3 SINE B2 -5 211 96 7 1203 317 300 0 0 chr13 81002614 81002704 -39281608 + (CA)n Simple_repeat Simple_repeat 1 90 0 8 1203 370 326 87 56 chr13 81004163 81004358 -39279954 - B4A SINE B4 -6 286 86 9 1203 419 0 0 19 chr13 81004398 81004450 -39279862 + (TTTTTG)n Simple_repeat Simple_repeat 6 56 0 1 1203 420 259 42 79 chr13 81004630 81004659 -39279653 - B2_Mm2 SINE B2 -13 182 152 1 1203 252 0 0 0 chr13 81004659 81004687 -39279625 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 1 1203 584 233 34 29 chr13 81004687 81004846 -39279466 - B3 SINE B2 -44 151 1 1 1203 381 196 80 12 chr13 81004850 81004958 -39279354 - PB1D7 SINE Alu 0 120 7 1 1203 226 296 23 34 chr13 81005058 81005233 -39279079 - L1ME3B LINE L1 -145 6095 5923 1 1203 212 178 22 0 chr13 81005246 81005291 -39279021 - B4 SINE B4 -245 47 2 1 1203 1301 47 18 0 chr13 81005827 81005998 -39278314 + (GGAGA)n Simple_repeat Simple_repeat 1 174 0 1 1203 1235 71 29 6 chr13 81006074 81006245 -39278067 + B2_Mm2 SINE B2 3 177 -18 1 1203 225 0 0 0 chr13 81006255 81006280 -39278032 + (GA)n Simple_repeat Simple_repeat 2 26 0 1 1203 492 99 0 0 chr13 81006280 81006351 -39277961 + (ATG)n Simple_repeat Simple_repeat 3 73 0 1 1203 1466 175 126 6 chr13 81006548 81006881 -39277431 + ORR1D1 LTR MaLR 1 373 -1 2 1203 334 368 36 7 chr13 81006914 81007051 -39277261 + B1F SINE Alu 2 142 -7 2 1203 435 276 0 0 chr13 81007317 81007404 -39276908 + RSINE1 SINE B4 5 91 -74 2 1203 626 122 9 0 chr13 81007443 81007550 -39276762 + (CA)n Simple_repeat Simple_repeat 1 108 0 2 1203 200 325 32 24 chr13 81007588 81007701 -39276611 + MIRb SINE MIR 69 183 -85 2 1203 1114 112 59 0 chr13 81007833 81008003 -39276309 + B2_Mm2 SINE B2 2 181 -14 2 1203 284 333 15 60 chr13 81008288 81008422 -39275890 + L2a LINE L2 3298 3425 -1 2 1203 5929 117 9 7 chr13 81008439 81009303 -39275009 + Lx2 LINE L1 6120 6985 -12 2 1203 522 270 20 7 chr13 81009358 81009511 -39274801 + Lx8 LINE L1 6509 6663 -810 2 1203 2002 197 83 0 chr13 81009521 81009896 -39274416 - MTC LTR MaLR -15 406 1 2 1203 1696 289 139 8 chr13 81009897 81010610 -39273702 + Lx8 LINE L1 6659 7464 -9 2 1203 282 307 11 11 chr13 81010780 81010869 -39273443 + BC1_Mm scRNA scRNA 14 102 -50 3 1203 29 0 0 0 chr13 81010894 81010923 -39273389 + AT_rich Low_complexity Low_complexity 1 29 0 3 1203 1054 294 107 0 chr13 81010953 81011290 -39273022 + MTE2b LTR MaLR 1 373 -6 3 1203 1982 141 120 3 chr13 81011292 81011641 -39272671 + ORR1B1 LTR MaLR 5 394 0 3 1203 294 274 102 8 chr13 81012167 81012285 -39272027 + L1MD3 LINE L1 6443 6571 -1424 3 1203 2049 98 35 89 chr13 81012305 81012652 -39271660 + ORR1A4 LTR MaLR 2 329 0 3 1203 243 300 89 14 chr13 81012778 81012991 -39271321 + L1MD3 LINE L1 7260 7488 -554 3 1203 1657 199 35 32 chr13 81013208 81013556 -39270756 - ORR1B2 LTR MaLR -18 349 1 3 1203 390 21 0 0 chr13 81013738 81013785 -39270527 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1203 429 20 0 0 chr13 81014157 81014207 -39270105 + (TTG)n Simple_repeat Simple_repeat 2 51 0 3 1203 1034 38 0 0 chr13 81014207 81014339 -39269973 - B1_Mm SINE Alu -8 139 8 3 1203 668 48 0 0 chr13 81014697 81014781 -39269531 + B1_Mus2 SINE Alu 5 88 -59 4 1203 402 21 0 0 chr13 81014781 81014828 -39269484 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 4 1203 234 157 99 14 chr13 81015667 81015738 -39268574 + L1M1 LINE L1 5831 5907 -393 4 1203 646 314 0 0 chr13 81015885 81016079 -39268233 + Lx8 LINE L1 6581 6774 -699 4 1203 2026 122 51 0 chr13 81016085 81016396 -39267916 - ORR1A2 LTR MaLR 0 327 1 4 1203 8127 148 30 6 chr13 81016396 81017813 -39266499 - ORR1A2-int LTR MaLR 0 1792 342 4 1203 1325 231 131 8 chr13 81017960 81018325 -39265987 - ORR1A2 LTR MaLR -14 405 1 4 1203 324 0 0 0 chr13 81018417 81018453 -39265859 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 4 1203 938 145 217 0 chr13 81018453 81018619 -39265693 - B3 SINE B2 -14 202 1 4 1203 935 61 262 13 chr13 81018659 81018808 -39265504 - B2_Mm2 SINE B2 -8 187 2 4 1203 44 0 0 0 chr13 81018863 81018907 -39265405 + AT_rich Low_complexity Low_complexity 1 44 0 4 1203 462 265 173 11 chr13 81018975 81019166 -39265146 + Lx8 LINE L1 7013 7234 -239 4 1203 237 290 84 53 chr13 81019406 81019537 -39264775 + RLTR13D1 LTR ERVK 321 455 -351 4 1203 21 36 0 0 chr13 81019785 81019813 -39264499 + AT_rich Low_complexity Low_complexity 1 28 0 5 1203 205 29 29 29 chr13 81019842 81019877 -39264435 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1203 297 229 59 59 chr13 81019880 81019982 -39264330 - PB1D10 SINE Alu -15 102 1 5 1203 364 226 46 138 chr13 81020881 81021035 -39263277 + B3 SINE B2 58 197 -1 5 1203 246 194 0 0 chr13 81022392 81022459 -39261853 + (CGG)n Simple_repeat Simple_repeat 3 69 0 5 1203 21 0 0 0 chr13 81022546 81022567 -39261745 + GC_rich Low_complexity Low_complexity 1 21 0 5 1203 26 0 0 0 chr13 81024509 81024535 -39259777 + AT_rich Low_complexity Low_complexity 1 26 0 5 1203 22 35 0 0 chr13 81025329 81025358 -39258954 + GC_rich Low_complexity Low_complexity 1 29 0 5 1203 26 50 0 0 chr13 81025413 81025453 -39258859 + GC_rich Low_complexity Low_complexity 1 40 0 5 1203 189 0 0 0 chr13 81025937 81025958 -39258354 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1203 204 266 61 37 chr13 81026149 81026231 -39258081 - L4 LINE RTE -1198 831 748 6 1203 21 36 0 0 chr13 81031908 81031936 -39252376 + AT_rich Low_complexity Low_complexity 1 28 0 6 1203 22 56 0 0 chr13 81031975 81032011 -39252301 + AT_rich Low_complexity Low_complexity 1 36 0 6 1203 213 214 0 0 chr13 81033176 81033232 -39251080 + T-rich Low_complexity Low_complexity 1 56 0 6 1203 197 65 0 31 chr13 81033613 81033645 -39250667 + (TTG)n Simple_repeat Simple_repeat 2 32 0 6 1203 25 0 0 0 chr13 81033807 81033832 -39250480 + AT_rich Low_complexity Low_complexity 1 25 0 6 1203 378 0 0 0 chr13 81035516 81035558 -39248754 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1203 1100 150 319 40 chr13 81036746 81036920 -39247392 + ORR1C2 LTR MaLR 4 262 -122 6 1203 329 0 24 0 chr13 81036920 81036961 -39247351 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1203 1100 150 319 40 chr13 81036961 81037084 -39247228 + ORR1C2 LTR MaLR 263 384 0 6 1203 238 220 102 0 chr13 81037261 81037320 -39246992 + B4A SINE B4 13 77 -215 6 1203 208 0 62 0 chr13 81037321 81037353 -39246959 + (CCCCCA)n Simple_repeat Simple_repeat 3 36 0 7 1203 237 298 191 53 chr13 81037379 81037510 -39246802 + B1_Mur1 SINE Alu 1 149 0 7 1203 519 283 25 12 chr13 81037504 81037665 -39246647 + B4A SINE B4 80 242 -50 6 1203 639 250 88 0 chr13 81037753 81037889 -39246423 - B3A SINE B2 -47 151 4 7 1203 334 336 46 62 chr13 81038333 81038463 -39245849 + ID_B1 SINE B4 1 128 -96 7 1203 1037 75 0 0 chr13 81038707 81038841 -39245471 + B1_Mus1 SINE Alu 15 148 0 7 1203 350 302 35 35 chr13 81039496 81039571 -39244741 + L1MA5 LINE L1 6065 6140 -160 7 1203 758 199 13 27 chr13 81039571 81039721 -39244591 + B1_Mur3 SINE Alu 1 148 -1 7 1203 350 302 35 35 chr13 81039721 81039844 -39244468 + L1MA5 LINE L1 6141 6263 -37 7 1203 22 0 0 0 chr13 81040272 81040294 -39244018 + AT_rich Low_complexity Low_complexity 1 22 0 7 1203 272 185 4 51 chr13 81041527 81041605 -39242707 + B1_Mus1 SINE Alu 2 148 -1 7 1203 481 76 0 15 chr13 81041612 81041679 -39242633 - ORR1C1 LTR MaLR -59 319 254 7 1203 583 164 71 26 chr13 81041674 81041787 -39242525 - B1_Mur2 SINE Alu -11 138 21 8 1203 348 248 86 26 chr13 81041789 81041905 -39242407 + MLT1A0 LTR MaLR 200 322 -43 8 1203 204 263 20 40 chr13 81042007 81042106 -39242206 + (CAGA)n Simple_repeat Simple_repeat 2 98 0 8 1203 299 309 85 50 chr13 81042512 81042713 -39241599 + MLT1A1 LTR MaLR 35 242 -166 8 1203 229 222 0 18 chr13 81042742 81042797 -39241515 + MLT1A1 LTR MaLR 355 408 0 8 1203 339 277 70 18 chr13 81043983 81044097 -39240215 - MER5A1 DNA MER1_type 0 166 47 8 1203 1106 312 20 52 chr13 81044097 81044367 -39239945 + L1_Mur3 LINE L1 3887 4145 -1735 8 1203 1090 66 29 0 chr13 81044367 81044504 -39239808 - B1_Mus2 SINE Alu -6 141 1 8 1203 1106 312 20 52 chr13 81044504 81045017 -39239295 + L1_Mur3 LINE L1 4146 4645 -1235 8 1203 7062 82 15 6 chr13 81045114 81046641 -39237671 - L1VL2 LINE L1 -1586 2029 487 8 1203 295 115 350 39 chr13 81046643 81046746 -39237566 - B2_Mm2 SINE B2 -13 182 48 8 1203 1309 90 11 0 chr13 81046798 81046975 -39237337 - B2_Mm1t SINE B2 -14 179 1 8 1203 346 224 139 30 chr13 81047017 81047118 -39237194 - B1F2 SINE Alu -31 118 7 9 1203 272 288 0 12 chr13 81047270 81047340 -39236972 - MLT1A1 LTR MaLR -8 400 332 9 1203 379 282 29 43 chr13 81047340 81047495 -39236817 + B4A SINE B4 2 153 -139 9 1203 949 226 183 143 chr13 81047495 81047965 -39236347 + MT2A LTR ERVL 1 489 -44 9 1203 378 222 0 23 chr13 81047965 81048094 -39236218 + (TA)n Simple_repeat Simple_repeat 2 127 0 9 1203 1650 198 94 20 chr13 81048109 81048459 -39235853 - RLTR14 LTR ERV1 0 382 7 9 1203 5615 211 90 59 chr13 81048483 81048720 -39235592 - RLTR14-int LTR ERV1 0 5317 5059 9 1203 450 0 0 0 chr13 81048720 81048770 -39235542 + (TC)n Simple_repeat Simple_repeat 1 50 0 9 1203 303 28 0 0 chr13 81048770 81048805 -39235507 + (CA)n Simple_repeat Simple_repeat 1 36 0 9 1203 5615 211 90 59 chr13 81048805 81049526 -39234786 - RLTR14-int LTR ERV1 -259 5058 4302 9 1203 449 83 11 35 chr13 81049526 81049613 -39234699 + (TA)n Simple_repeat Simple_repeat 1 85 0 9 1203 5615 211 90 59 chr13 81049613 81050462 -39233850 - RLTR14-int LTR ERV1 -1016 4301 3455 9 1203 184 147 39 26 chr13 81050466 81050543 -39233769 + (TA)n Simple_repeat Simple_repeat 1 78 0 9 1203 330 67 0 0 chr13 81050659 81050704 -39233608 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1203 283 292 139 30 chr13 81050722 81050888 -39233424 - MLT1A1 LTR MaLR -49 359 176 9 1203 1032 53 0 0 chr13 81050901 81051033 -39233279 - B2_Mm2 SINE B2 -63 132 1 1 1203 802 159 96 7 chr13 81051145 81051352 -39232960 + ORR1C1 LTR MaLR 1 187 -187 1 1203 711 108 0 0 chr13 81051352 81051463 -39232849 + (TC)n Simple_repeat Simple_repeat 2 112 0 1 1203 772 140 187 17 chr13 81051465 81051657 -39232655 + ORR1C1 LTR MaLR 159 386 -8 1 1203 372 358 9 0 chr13 81051685 81051794 -39232518 + MIR SINE MIR 16 125 -137 1 1203 480 216 147 15 chr13 81053544 81053741 -39230571 + Lx9 LINE L1 7414 7636 -8 1 1203 476 253 40 17 chr13 81053745 81053922 -39230390 + L1_Mur3 LINE L1 4571 4758 -1122 1 1203 237 128 64 0 chr13 81053938 81053985 -39230327 + L1M2 LINE L1 4886 4935 -1208 1 1203 1694 255 67 10 chr13 81053988 81054277 -39230035 + Lx8 LINE L1 6648 6962 -511 1 1203 459 0 0 0 chr13 81054277 81054328 -39229984 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1203 1694 255 67 10 chr13 81054328 81054561 -39229751 + Lx8 LINE L1 6963 7199 -274 1 1203 477 312 0 34 chr13 81054953 81055102 -39229210 - ID_B1 SINE B4 0 224 81 1 1203 327 274 21 95 chr13 81055238 81055427 -39228885 - B3 SINE B2 -18 177 5 1 1203 334 292 8 102 chr13 81055686 81055804 -39228508 + PB1D10 SINE Alu 10 116 -1 1 1203 22 0 0 0 chr13 81055829 81055851 -39228461 + AT_rich Low_complexity Low_complexity 1 22 0 1 1203 268 227 30 15 chr13 81055965 81056032 -39228280 + GA-rich Low_complexity Low_complexity 3 70 0 1 1203 262 330 19 19 chr13 81056037 81056145 -39228167 + Kanga1 DNA Tc2 1632 1739 -6 1 1203 351 0 0 0 chr13 81056959 81056998 -39227314 + (TATG)n Simple_repeat Simple_repeat 1 39 0 1 1203 270 0 0 0 chr13 81057233 81057263 -39227049 + (CCA)n Simple_repeat Simple_repeat 3 32 0 1 1203 708 169 46 60 chr13 81057547 81057698 -39226614 - B1_Mur3 SINE Alu 0 149 1 1 1203 327 25 0 0 chr13 81058168 81058208 -39226104 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1203 225 119 0 0 chr13 81058208 81058250 -39226062 + (CCA)n Simple_repeat Simple_repeat 3 44 0 1 1203 252 208 0 0 chr13 81058304 81058352 -39225960 + Lx8 LINE L1 7041 7088 -385 1 1203 234 280 44 126 chr13 81058352 81058487 -39225825 + MT2B LTR ERVL 155 278 -323 1 1203 673 223 1 0 chr13 81058370 81058504 -39225808 + B1_Mur1 SINE Alu 5 139 -10 1 1203 201 74 0 0 chr13 81058504 81058531 -39225781 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1203 332 264 270 0 chr13 81058575 81058738 -39225574 + Lx8 LINE L1 7097 7303 -170 1 1203 649 199 62 34 chr13 81058791 81058937 -39225375 - B1_Mur4 SINE Alu 0 150 1 1 1203 1863 277 101 9 chr13 81058937 81059513 -39224799 - Lx8 LINE L1 -472 7001 6373 1 1203 244 180 20 0 chr13 81059878 81059928 -39224384 - MLT1A LTR MaLR -227 147 97 1 1203 1433 47 15 73 chr13 81060555 81060760 -39223552 - B2_Mm2 SINE B2 -1 194 2 1 1203 1179 247 26 87 chr13 81061072 81061462 -39222850 + RMER10B LTR ERVL 9 374 -24 1 1203 223 299 0 22 chr13 81061512 81061601 -39222711 + RSINE1 SINE B4 79 165 0 1 1203 194 0 39 0 chr13 81061746 81061772 -39222540 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1203 246 305 35 47 chr13 81061944 81062030 -39222282 + PB1D10 SINE Alu 31 115 -2 1 1203 355 303 0 84 chr13 81062186 81062341 -39221971 - ID_B1 SINE B4 -10 214 73 1 1203 664 146 16 8 chr13 81062379 81062503 -39221809 - ORR1A1 LTR MaLR -221 125 1 1 1203 936 82 0 0 chr13 81063006 81063141 -39221171 + (TGG)n Simple_repeat Simple_repeat 1 135 0 1 1203 462 239 77 0 chr13 81063146 81063263 -39221049 - B1F1 SINE Alu 0 149 24 1 1203 378 305 56 31 chr13 81063263 81063342 -39220970 - ID_B1 SINE B4 0 224 24 1 1203 211 292 31 20 chr13 81063343 81063441 -39220871 - MIR SINE MIR -113 149 51 1 1203 186 314 95 0 chr13 81063584 81063689 -39220623 + L2 LINE L2 2531 2645 -774 1 1203 310 320 53 38 chr13 81063689 81063822 -39220490 - MTEa LTR MaLR 0 379 245 1 1203 443 259 46 0 chr13 81063994 81064102 -39220210 + PB1D9 SINE Alu 1 113 -7 1 1203 879 35 0 0 chr13 81064593 81064707 -39219605 + B1_Mus2 SINE Alu 21 134 -13 1 1203 297 0 0 0 chr13 81064707 81064740 -39219572 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 1 1203 428 223 10 10 chr13 81065163 81065267 -39219045 + MTE2b LTR MaLR 1 104 -275 1 1203 361 258 0 40 chr13 81065273 81065374 -39218938 + B1_Mur2 SINE Alu 21 117 -32 1 1203 954 162 90 16 chr13 81065490 81065735 -39218577 + RMER10B LTR ERVL 1 263 -135 1 1203 629 199 6 17 chr13 81065747 81065926 -39218386 + CT-rich Low_complexity Low_complexity 4 180 0 1 1203 224 241 13 0 chr13 81065940 81066019 -39218293 + CT-rich Low_complexity Low_complexity 2 81 0 1 1203 666 78 0 0 chr13 81066029 81066131 -39218181 + (TTTC)n Simple_repeat Simple_repeat 4 105 0 1 1203 1884 201 85 22 chr13 81066175 81066702 -39217610 + RMER19B LTR ERVK 10 514 -388 1 1203 711 250 123 18 chr13 81066712 81066932 -39217380 + MTE2b LTR MaLR 135 377 -2 1 1203 326 231 0 0 chr13 81066955 81067020 -39217292 - tRNA-Ala-GCY_ tRNA tRNA -9 66 2 1 1203 223 143 71 0 chr13 81067268 81067324 -39216988 + (TTATA)n Simple_repeat Simple_repeat 1 60 0 1 1203 348 118 0 0 chr13 81067956 81068024 -39216288 + (A)n Simple_repeat Simple_repeat 1 68 0 1 1203 275 329 56 21 chr13 81068103 81068232 -39216080 + B1F2 SINE Alu 1 136 -13 1 1203 225 0 0 0 chr13 81068232 81068257 -39216055 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1 1203 275 329 56 21 chr13 81068257 81068270 -39216042 + B1F2 SINE Alu 137 148 -1 1 1203 356 318 38 54 chr13 81069391 81069577 -39214735 + MIR SINE MIR 44 226 -36 1 1203 216 0 0 0 chr13 81069685 81069709 -39214603 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1203 405 0 0 0 chr13 81069709 81069753 -39214559 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1203 206 416 56 24 chr13 81069769 81070018 -39214294 - L2a LINE L2 -187 3239 2983 1 1203 349 401 34 0 chr13 81070381 81070558 -39213754 + L2a LINE L2 2983 3165 -261 1 1203 715 231 7 0 chr13 81070676 81070823 -39213489 + B1_Mur3 SINE Alu 2 149 0 1 1203 615 200 8 39 chr13 81071039 81071169 -39213143 + B1_Mur3 SINE Alu 6 131 -18 1 1203 249 347 82 6 chr13 81071191 81071362 -39212950 - L2a LINE L2 -685 2734 2551 1 1203 1094 251 40 10 chr13 81072144 81072448 -39211864 - ORR1D2 LTR MaLR -7 363 18 1 1203 457 210 64 8 chr13 81072534 81072659 -39211653 - ORR1D2 LTR MaLR -238 132 1 1 1203 558 263 8 8 chr13 81072805 81072939 -39211373 + B3A SINE B2 4 137 -61 1 1203 1149 88 0 0 chr13 81073396 81073543 -39210769 + B1_Mus1 SINE Alu 2 148 0 1 1203 268 57 55 41 chr13 81073543 81073616 -39210696 + (CAAA)n Simple_repeat Simple_repeat 1 74 0 1 1203 485 329 31 12 chr13 81073836 81073996 -39210316 - RSINE1 SINE B4 -1 164 2 1 1203 244 234 0 30 chr13 81074031 81074097 -39210215 + CT-rich Low_complexity Low_complexity 3 66 0 1 1203 815 238 86 4 chr13 81074626 81074871 -39209441 + B4A SINE B4 12 276 -16 1 1203 363 78 0 0 chr13 81074921 81074972 -39209340 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1203 558 29 0 0 chr13 81076221 81076289 -39208023 + (TTTC)n Simple_repeat Simple_repeat 1 68 0 1 1203 7584 91 6 10 chr13 81076386 81077692 -39206620 + L1_Mus4 LINE L1 5286 6590 -46 1 1203 781 87 0 42 chr13 81077692 81077812 -39206500 + B1_Mus1 SINE Alu 34 148 0 1 1203 207 171 0 0 chr13 81077812 81077847 -39206465 + A-rich Low_complexity Low_complexity 5 39 0 1 1203 23 0 0 0 chr13 81078018 81078041 -39206271 + AT_rich Low_complexity Low_complexity 1 23 0 1 1203 216 0 0 0 chr13 81078056 81078080 -39206232 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 1 1203 189 0 0 0 chr13 81078485 81078506 -39205806 + (CTG)n Simple_repeat Simple_repeat 1 21 0 1 1203 264 242 0 15 chr13 81078953 81079020 -39205292 - MIRc SINE MIR -120 148 83 1 1203 360 0 0 0 chr13 81079036 81079076 -39205236 + (TC)n Simple_repeat Simple_repeat 1 40 0 1 1203 251 71 24 0 chr13 81079076 81079117 -39205195 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1203 665 180 6 0 chr13 81079130 81079302 -39205010 + (CA)n Simple_repeat Simple_repeat 1 173 0 1 1203 429 258 6 41 chr13 81080244 81080414 -39203898 - AmnSINE1 SINE SINE -404 171 8 1 1203 392 267 209 58 chr13 81082241 81082432 -39201880 - ID_B1 SINE B4 -4 220 1 1 1203 188 265 7 0 chr13 81082734 81082881 -39201431 + (CA)n Simple_repeat Simple_repeat 1 148 0 1 1203 323 242 0 6 chr13 81082906 81083064 -39201248 + (CA)n Simple_repeat Simple_repeat 2 158 0 1 1203 240 240 0 0 chr13 81083149 81083270 -39201042 + (CA)n Simple_repeat Simple_repeat 2 122 0 1 1203 464 206 7 0 chr13 81083317 81083463 -39200849 + (CA)n Simple_repeat Simple_repeat 2 148 0 1 1203 598 245 174 32 chr13 81084541 81084794 -39199518 - B4 SINE B4 0 292 4 1 1203 347 273 53 26 chr13 81084817 81084930 -39199382 - PB1D10 SINE Alu -1 116 1 1 1203 287 338 57 7 chr13 81085688 81085828 -39198484 + B1F SINE Alu 2 148 -1 1 1203 265 311 19 19 chr13 81086350 81086458 -39197854 + CT-rich Low_complexity Low_complexity 4 111 0 1 1203 925 158 0 21 chr13 81086491 81086732 -39197580 + GA-rich Low_complexity Low_complexity 1 235 0 1 1203 359 196 86 11 chr13 81087573 81087666 -39196646 + PB1D10 SINE Alu 18 117 0 1 1203 24 53 0 0 chr13 81087764 81087802 -39196510 + AT_rich Low_complexity Low_complexity 1 38 0 1 1203 181 297 62 0 chr13 81087877 81087941 -39196371 - L2a LINE L2 -2 3424 3357 1 1203 198 0 0 0 chr13 81089047 81089069 -39195243 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1203 301 227 186 0 chr13 81089296 81089393 -39194919 + RSINE1 SINE B4 18 132 -33 1 1203 25 0 0 0 chr13 81089428 81089453 -39194859 + AT_rich Low_complexity Low_complexity 1 25 0 1 1203 198 67 21 43 chr13 81089495 81089542 -39194770 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1203 431 327 95 18 chr13 81089543 81089764 -39194548 - B4A SINE B4 -46 246 9 1 1203 659 316 5 31 chr13 81089751 81089944 -39194368 - ID_B1 SINE B4 -10 214 27 1 1203 299 303 0 11 chr13 81091282 81091372 -39192940 + MER57A-int LTR ERV1 5805 5893 -294 1 1203 22 56 0 0 chr13 81091456 81091492 -39192820 + AT_rich Low_complexity Low_complexity 1 36 0 1 1203 825 11 0 0 chr13 81091569 81091663 -39192649 + (TTTC)n Simple_repeat Simple_repeat 4 97 0 2 1203 541 326 42 68 chr13 81092086 81092349 -39191963 - MER21B LTR ERV1 -242 621 366 2 1203 830 229 17 11 chr13 81092434 81092615 -39191697 - B3 SINE B2 -34 182 1 2 1203 267 298 40 69 chr13 81092615 81092712 -39191600 - MER21B LTR ERV1 -644 219 126 2 1203 1188 63 0 0 chr13 81092770 81092928 -39191384 + (TG)n Simple_repeat Simple_repeat 2 159 0 2 1203 302 241 35 24 chr13 81092948 81093033 -39191279 - ID_B1 SINE B4 -10 214 129 2 1203 228 333 9 47 chr13 81094505 81094612 -39189700 - PB1D10 SINE Alu -1 116 14 2 1203 234 286 149 15 chr13 81095155 81095364 -39188948 + MIRb SINE MIR 32 261 -1 2 1203 23 54 0 0 chr13 81095386 81095423 -39188889 + AT_rich Low_complexity Low_complexity 1 37 0 2 1203 592 301 166 45 chr13 81095600 81095931 -39188381 - MTD LTR MaLR -39 380 10 2 1203 352 247 13 0 chr13 81096060 81096137 -39188175 - B1F SINE Alu -60 89 12 2 1203 241 301 0 87 chr13 81096137 81096173 -39188139 - ID_B1 SINE B4 -57 167 73 2 1203 21 57 0 0 chr13 81096207 81096242 -39188070 + AT_rich Low_complexity Low_complexity 1 35 0 2 1203 549 194 9 0 chr13 81096512 81096620 -39187692 + B1_Mur1 SINE Alu 34 142 -7 2 1203 213 121 0 0 chr13 81096620 81096653 -39187659 + (CAAG)n Simple_repeat Simple_repeat 1 33 0 2 1203 21 0 0 0 chr13 81098227 81098248 -39186064 + AT_rich Low_complexity Low_complexity 1 21 0 2 1203 270 0 0 0 chr13 81099064 81099094 -39185218 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1203 308 299 57 21 chr13 81099643 81099783 -39184529 + MLT1B LTR MaLR 246 390 0 2 1203 199 279 33 0 chr13 81100398 81100459 -39183853 - MIRm SINE MIR -124 152 90 2 1203 537 125 0 0 chr13 81100723 81100811 -39183501 + (TTCC)n Simple_repeat Simple_repeat 3 90 0 2 1203 37 23 0 0 chr13 81100927 81100971 -39183341 + AT_rich Low_complexity Low_complexity 1 44 0 2 1203 598 175 25 0 chr13 81101081 81101201 -39183111 - B1_Mus2 SINE Alu -16 131 9 2 1203 180 0 0 0 chr13 81101218 81101238 -39183074 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1203 221 98 75 38 chr13 81101937 81101990 -39182322 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 2 1203 233 307 13 0 chr13 81103376 81103451 -39180861 + MER5A1 DNA MER1_type 1 76 -90 2 1203 1821 141 17 81 chr13 81103753 81104101 -39180211 - ORR1A3 LTR MaLR 0 326 1 2 1203 4866 212 128 18 chr13 81104356 81105611 -39178701 + Lx9 LINE L1 6092 7484 -160 2 1203 384 77 0 0 chr13 81105611 81105663 -39178649 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1203 262 165 161 23 chr13 81105670 81105757 -39178555 + Lx9 LINE L1 7538 7636 -8 2 1203 1153 74 0 0 chr13 81105799 81105962 -39178350 + B2_Mm2 SINE B2 1 163 -32 2 1203 453 200 35 43 chr13 81106038 81106153 -39178159 + PB1D9 SINE Alu 7 120 0 2 1203 348 83 0 0 chr13 81106825 81106873 -39177439 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1203 405 0 0 0 chr13 81106887 81106932 -39177380 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1203 221 278 64 14 chr13 81107337 81107437 -39176875 + B1F SINE Alu 9 148 -1 2 1203 26 0 0 0 chr13 81107536 81107562 -39176750 + AT_rich Low_complexity Low_complexity 1 26 0 2 1203 2280 190 27 68 chr13 81107563 81108089 -39176223 + RLTR16 LTR ERVK 1 504 -1 2 1203 567 275 0 0 chr13 81108441 81108561 -39175751 - RSINE1 SINE B4 -38 127 8 2 1203 756 77 0 0 chr13 81109010 81109114 -39175198 + (TTCC)n Simple_repeat Simple_repeat 3 106 0 2 1203 762 197 0 0 chr13 81109143 81109280 -39175032 - B1_Mur4 SINE Alu -6 144 8 2 1203 230 264 123 0 chr13 81109740 81109846 -39174466 + PB1D9 SINE Alu 2 120 0 2 1203 1228 125 15 25 chr13 81109971 81110168 -39174144 - B2_Mm2 SINE B2 0 195 1 2 1203 357 167 83 0 chr13 81111328 81111400 -39172912 - B1_Mm SINE Alu -6 141 64 2 1203 258 336 16 0 chr13 81111529 81111657 -39172655 - L1MD3 LINE L1 -2011 5984 5855 2 1203 630 250 35 14 chr13 81111807 81111949 -39172363 + B1_Mus2 SINE Alu 1 145 -2 2 1203 329 0 24 0 chr13 81112113 81112154 -39172158 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 2 1203 1017 67 8 0 chr13 81112154 81112288 -39172024 - B1_Mus1 SINE Alu 0 148 14 2 1203 234 0 0 0 chr13 81113167 81113193 -39171119 + (CAAAA)n Simple_repeat Simple_repeat 4 29 0 2 1203 400 245 18 70 chr13 81113220 81113334 -39170978 - ORR1D2 LTR MaLR -13 357 250 2 1203 195 100 0 0 chr13 81113574 81113604 -39170708 + (TCCCC)n Simple_repeat Simple_repeat 5 34 0 2 1203 497 250 227 37 chr13 81113836 81114052 -39170260 - ORR1D2 LTR MaLR -113 257 1 2 1203 620 227 129 39 chr13 81114062 81114342 -39169970 - L1ME1 LINE L1 -233 5946 5642 2 1203 2103 157 61 28 chr13 81114438 81114596 -39169716 + MTC LTR MaLR 7 181 -240 2 1203 2208 199 101 36 chr13 81114596 81115092 -39169220 + RLTR11A LTR ERVK 1 528 0 2 1203 2103 157 61 28 chr13 81115092 81115326 -39168986 + MTC LTR MaLR 182 412 -9 2 1203 598 251 104 26 chr13 81115946 81116138 -39168174 + B3 SINE B2 4 210 -6 2 1203 613 246 29 7 chr13 81117310 81117449 -39166863 + B3A SINE B2 9 150 -48 2 1203 1149 98 0 0 chr13 81117454 81117907 -39166405 + (CA)n Simple_repeat Simple_repeat 1 453 0 2 1203 258 287 191 0 chr13 81118166 81118260 -39166052 - B3 SINE B2 -104 112 1 2 1203 1133 98 12 0 chr13 81118288 81118461 -39165851 + (TTCC)n Simple_repeat Simple_repeat 3 177 0 2 1203 312 318 0 22 chr13 81118467 81118554 -39165758 - PB1D10 SINE Alu -15 102 18 2 1203 1480 194 26 83 chr13 81118554 81118903 -39165409 + ORR1A4 LTR MaLR 1 329 0 2 1203 9680 147 66 119 chr13 81118903 81120974 -39163338 + ORR1A4-int LTR MaLR 1 1962 -1 2 1203 2030 134 0 59 chr13 81120975 81121316 -39162996 + ORR1A4 LTR MaLR 1 321 -8 2 1203 270 239 50 120 chr13 81122623 81122723 -39161589 - RMER12 LTR ERVK -100 1222 1130 2 1203 194 91 0 29 chr13 81122725 81122759 -39161553 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1203 231 36 0 0 chr13 81122807 81122835 -39161477 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1203 552 111 18 9 chr13 81122835 81122943 -39161369 + (TA)n Simple_repeat Simple_repeat 2 111 0 2 1203 454 170 40 111 chr13 81122948 81123074 -39161238 - RLTR22_Mur LTR ERVK -540 1308 1192 2 1203 1384 249 89 144 chr13 81123152 81124015 -39160297 - RLTR22_Mur LTR ERVK -997 811 1 2 1203 520 260 41 0 chr13 81124205 81124328 -39159984 - ID_B1 SINE B4 -11 213 86 2 1203 317 136 41 96 chr13 81124364 81124437 -39159875 + MT2B LTR ERVL 172 240 -361 2 1203 380 158 56 89 chr13 81124376 81124466 -39159846 + PB1D9 SINE Alu 22 108 -12 2 1203 360 0 0 0 chr13 81124466 81124506 -39159806 + (GA)n Simple_repeat Simple_repeat 2 41 0 2 1203 449 291 36 22 chr13 81124586 81124723 -39159589 - B1F SINE Alu 0 149 11 2 1203 315 336 7 33 chr13 81124588 81124739 -39159573 - ID_B1 SINE B4 0 224 78 2 1203 198 331 131 0 chr13 81125042 81125173 -39159139 - L4 LINE RTE -1821 208 59 2 1203 529 251 117 67 chr13 81125173 81125515 -39158797 + ORR1E LTR MaLR 1 359 0 2 1203 198 331 131 0 chr13 81125515 81125528 -39158784 - L4 LINE RTE -1971 58 46 2 1203 335 206 16 0 chr13 81125704 81125767 -39158545 + ID SINE ID 2 65 -159 2 1203 293 260 13 40 chr13 81125709 81125785 -39158527 + tRNA-Ala-GCA tRNA tRNA 1 74 -1 2 1203 243 152 0 0 chr13 81125789 81125835 -39158477 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1203 881 297 30 99 chr13 81125985 81126389 -39157923 + MTEa LTR MaLR 1 376 -3 2 1203 317 261 52 0 chr13 81126510 81126625 -39157687 - HAL1 LINE L1 -1077 1430 1310 2 1203 451 171 30 0 chr13 81126734 81126830 -39157482 - B1_Mus1 SINE Alu -10 138 38 2 1203 261 83 0 0 chr13 81127643 81127679 -39156633 + (GGA)n Simple_repeat Simple_repeat 3 38 0 2 1203 259 241 69 15 chr13 81130600 81130692 -39153620 + L1MEc LINE L1 1298 1455 -4960 2 1203 1241 54 7 0 chr13 81130825 81130972 -39153340 - B1_Mus1 SINE Alu 0 148 1 2 1203 294 256 0 49 chr13 81131281 81131363 -39152949 + MTE2b LTR MaLR 21 98 -281 2 1203 545 320 7 0 chr13 81131363 81131516 -39152796 + MTE2b LTR MaLR 58 211 -168 2 1203 232 232 0 104 chr13 81131516 81131660 -39152652 + C-rich Low_complexity Low_complexity 5 133 0 2 1203 322 322 140 7 chr13 81131683 81131833 -39152479 + MTE2b LTR MaLR 202 371 -8 2 1203 2081 206 71 24 chr13 81132057 81132510 -39151802 + Lx5 LINE L1 6492 6965 -85 2 1203 306 302 20 20 chr13 81132533 81132557 -39151755 + MTE2b LTR MaLR 280 305 -74 2 1203 315 0 0 0 chr13 81132557 81132592 -39151720 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 2 1203 328 240 1 1 chr13 81132592 81132665 -39151647 + MTE2b LTR MaLR 306 377 -2 2 1203 330 299 115 139 chr13 81132767 81133062 -39151250 - B4 SINE B4 0 292 5 2 1203 506 232 17 59 chr13 81133068 81133187 -39151125 - PB1D10 SINE Alu -2 115 2 2 1203 322 336 112 30 chr13 81133205 81133557 -39150755 + LTR40a LTR ERVL 1 440 -79 2 1204 315 0 0 0 chr13 81133581 81133616 -39150696 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1204 264 143 0 0 chr13 81133616 81133672 -39150640 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 1204 628 330 122 61 chr13 81133933 81134400 -39149912 - MER21B LTR ERV1 -44 819 321 2 1204 774 232 0 0 chr13 81134400 81134538 -39149774 - B1_Mur1 SINE Alu -7 142 5 2 1204 628 330 122 61 chr13 81134538 81134612 -39149700 - MER21B LTR ERV1 -543 320 245 2 1204 450 0 0 0 chr13 81134917 81134967 -39149345 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1204 590 238 8 8 chr13 81135008 81135131 -39149181 + RSINE1 SINE B4 3 125 -40 2 1204 380 274 27 12 chr13 81135220 81135316 -39148996 + PB1D10 SINE Alu 8 105 -12 2 1204 1606 158 30 0 chr13 81135719 81135985 -39148327 + RLTR27 LTR ERVK 1 274 -35 2 1204 410 345 44 49 chr13 81136112 81136168 -39148144 + MER63A DNA AcHobo 26 83 -127 2 1204 231 269 34 114 chr13 81136168 81136256 -39148056 - ID4_ SINE ID -1 82 2 2 1204 410 345 44 49 chr13 81136256 81136382 -39147930 + MER63A DNA AcHobo 84 207 -3 2 1204 300 234 0 0 chr13 81136535 81136629 -39147683 + (TG)n Simple_repeat Simple_repeat 1 94 0 2 1204 737 272 45 23 chr13 81136629 81136806 -39147506 - B3A SINE B2 -16 182 2 2 1204 246 32 0 0 chr13 81136980 81137011 -39147301 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1204 26173 146 21 11 chr13 81137299 81143469 -39140843 + Lx LINE L1 422 6654 0 2 1204 200 371 14 77 chr13 81143679 81143822 -39140490 + L2b LINE L2 3242 3375 0 3 1204 635 237 107 15 chr13 81143935 81144132 -39140180 + B3 SINE B2 2 216 0 3 1204 767 250 35 0 chr13 81144293 81144465 -39139847 + ORR1D1 LTR MaLR 1 178 -196 3 1204 713 216 36 77 chr13 81144463 81144659 -39139653 + ORR1D1-int LTR MaLR 357 544 -826 3 1204 306 0 0 0 chr13 81144842 81144876 -39139436 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1204 291 165 11 23 chr13 81145248 81145335 -39138977 + (CA)n Simple_repeat Simple_repeat 1 86 0 3 1204 24 32 0 0 chr13 81145508 81145539 -39138773 + AT_rich Low_complexity Low_complexity 1 31 0 3 1204 681 277 142 28 chr13 81145784 81146066 -39138246 + MER2 DNA MER2_type 1 314 -31 3 1204 408 143 0 0 chr13 81146719 81146789 -39137523 + (CA)n Simple_repeat Simple_repeat 2 71 0 3 1204 406 266 36 18 chr13 81146959 81147070 -39137242 + PB1D7 SINE Alu 2 114 -6 3 1204 282 125 0 0 chr13 81147177 81147225 -39137087 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 3 1204 4917 179 22 23 chr13 81147225 81148094 -39136218 - Lx5 LINE L1 0 7050 6183 3 1204 228 319 99 0 chr13 81149172 81149263 -39135049 - B1F SINE Alu -46 103 4 3 1204 292 219 11 118 chr13 81149661 81149677 -39134635 + MT2B LTR ERVL 158 163 -438 3 1204 498 231 46 0 chr13 81149677 81149785 -39134527 + PB1D9 SINE Alu 4 116 -4 3 1204 259 406 73 12 chr13 81149798 81150045 -39134267 - L2 LINE L2 -624 2795 2534 3 1204 185 139 23 0 chr13 81150502 81150545 -39133767 + (TATG)n Simple_repeat Simple_repeat 1 44 0 3 1204 719 334 111 22 chr13 81150590 81150827 -39133485 - MLT2B5 LTR ERVL -86 515 263 3 1204 231 61 0 0 chr13 81150827 81150860 -39133452 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3 1204 719 334 111 22 chr13 81150860 81150983 -39133329 - MLT2B5 LTR ERVL -339 262 123 3 1204 243 88 0 0 chr13 81151035 81151069 -39133243 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 3 1204 471 307 120 62 chr13 81151591 81151949 -39132363 - MTEb LTR MaLR 0 379 1 3 1204 555 175 0 0 chr13 81152093 81152213 -39132099 + CT-rich Low_complexity Low_complexity 2 121 0 3 1204 629 204 0 9 chr13 81152214 81152328 -39131984 - PB1D9 SINE Alu -5 115 3 3 1204 280 310 106 80 chr13 81152438 81152579 -39131733 - RMER17C LTR ERVK -41 369 235 3 1204 3689 60 0 9 chr13 81152579 81153015 -39131297 + L1_Mus1 LINE L1 6136 6567 0 3 1204 280 310 106 80 chr13 81153015 81153185 -39131127 - RMER17C LTR ERVK -176 234 50 3 1204 261 246 72 0 chr13 81153484 81153553 -39130759 + MLT1N2 LTR MaLR 7 80 -482 3 1204 279 0 0 0 chr13 81154318 81154349 -39129963 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 3 1204 1813 239 12 24 chr13 81154349 81154761 -39129551 + MTD LTR MaLR 13 419 0 3 1204 1276 48 0 0 chr13 81155631 81155777 -39128535 + B1_Mm SINE Alu 2 147 0 3 1204 238 310 153 57 chr13 81155901 81156110 -39128202 - L3 LINE CR1 -248 4241 4013 3 1204 1515 60 4 0 chr13 81156298 81156561 -39127751 + (TTCCC)n Simple_repeat Simple_repeat 1 263 0 3 1204 489 280 123 21 chr13 81156663 81156948 -39127364 - L1MEg LINE L1 -4067 2017 1704 3 1204 695 258 39 78 chr13 81157137 81157343 -39126969 + B3A SINE B2 1 198 0 3 1204 1033 141 0 13 chr13 81158504 81158655 -39125657 + B1_Mur4 SINE Alu 2 150 0 3 1204 196 351 158 26 chr13 81159835 81159987 -39124325 + MER5B DNA MER1_type 1 172 -6 3 1204 480 256 94 23 chr13 81160883 81161011 -39123301 + B1F2 SINE Alu 6 142 -7 3 1204 22 0 0 0 chr13 81161013 81161035 -39123277 + AT_rich Low_complexity Low_complexity 1 22 0 3 1204 213 240 0 39 chr13 81161607 81161659 -39122653 + G-rich Low_complexity Low_complexity 5 54 0 3 1204 781 223 7 7 chr13 81162868 81163017 -39121295 + B1_Mur3 SINE Alu 1 149 0 3 1204 2453 76 82 0 chr13 81163364 81163692 -39120620 + IAPEY2_LTR LTR ERVK 1 355 -2 3 1204 7216 118 20 13 chr13 81163694 81164794 -39119518 + IAPEY3-int LTR ERVK 1 1108 -6572 3 1204 449 76 161 61 chr13 81164794 81164888 -39119424 + IAPEY2_LTR LTR ERVK 245 373 -12 3 1204 5182 114 27 35 chr13 81165257 81165604 -39118708 + RMER17D2 LTR ERVK 1 349 -460 3 1204 909 19 0 0 chr13 81165604 81165711 -39118601 + (TCTCC)n Simple_repeat Simple_repeat 2 108 0 3 1204 5182 114 27 35 chr13 81165711 81166179 -39118133 + RMER17D2 LTR ERVK 350 809 0 3 1204 1338 142 44 0 chr13 81166709 81166935 -39117377 - L1VL4 LINE L1 -542 5335 5100 3 1204 198 0 0 0 chr13 81166977 81166999 -39117313 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 3 1204 17037 92 16 9 chr13 81169191 81172561 -39111751 - L1VL4 LINE L1 -1896 3990 565 3 1204 412 338 24 24 chr13 81172636 81172800 -39111512 + B3A SINE B2 2 165 -33 3 1204 883 236 18 23 chr13 81173281 81173498 -39110814 - B3 SINE B2 0 216 1 3 1204 22 0 0 0 chr13 81173717 81173739 -39110573 + AT_rich Low_complexity Low_complexity 1 22 0 3 1204 282 138 0 0 chr13 81173781 81173839 -39110473 + (T)n Simple_repeat Simple_repeat 1 58 0 3 1204 1052 162 224 6 chr13 81174272 81174611 -39109701 + MTC LTR MaLR 1 413 -8 3 1204 524 246 59 0 chr13 81174875 81174993 -39109319 - RSINE1 SINE B4 -33 132 8 3 1204 234 194 0 0 chr13 81175203 81175265 -39109047 + ORR1E LTR MaLR 67 128 -231 3 1204 22 56 0 0 chr13 81176344 81176380 -39107932 + AT_rich Low_complexity Low_complexity 1 36 0 3 1204 207 0 0 0 chr13 81176536 81176559 -39107753 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 3 1204 23 54 0 0 chr13 81177037 81177074 -39107238 + AT_rich Low_complexity Low_complexity 1 37 0 3 1204 519 136 0 0 chr13 81177672 81177782 -39106530 + (TC)n Simple_repeat Simple_repeat 1 110 0 3 1204 267 93 0 0 chr13 81177782 81177825 -39106487 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1204 481 272 47 53 chr13 81177830 81177978 -39106334 - B3 SINE B2 -46 170 23 3 1204 1653 238 90 12 chr13 81177978 81178468 -39105844 + RLTR11A LTR ERVK 1 528 0 3 1204 481 272 47 53 chr13 81178468 81178490 -39105822 - B3 SINE B2 -194 22 1 3 1204 422 272 81 0 chr13 81178493 81178666 -39105646 - L1MB2 LINE L1 -271 5900 5714 3 1204 284 338 100 35 chr13 81178936 81179255 -39105057 - L1M5 LINE L1 -2567 3579 3240 3 1204 25 31 0 0 chr13 81179673 81179705 -39104607 + AT_rich Low_complexity Low_complexity 1 32 0 3 1204 651 234 42 6 chr13 81180014 81180182 -39104130 - L1MB8 LINE L1 0 6178 6005 3 1204 364 305 62 51 chr13 81180857 81180942 -39103370 - MLT1B LTR MaLR -16 374 285 3 1204 1154 236 98 0 chr13 81180942 81181269 -39103043 + ORR1E LTR MaLR 1 359 0 3 1204 364 305 62 51 chr13 81181269 81181359 -39102953 - MLT1B LTR MaLR -106 284 197 3 1204 261 0 0 0 chr13 81181378 81181407 -39102905 + (ATATG)n Simple_repeat Simple_repeat 5 33 0 3 1204 213 39 0 0 chr13 81181692 81181718 -39102594 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 3 1204 720 35 0 0 chr13 81181721 81181808 -39102504 + (TTTC)n Simple_repeat Simple_repeat 2 88 0 3 1204 827 170 7 0 chr13 81181810 81181945 -39102367 - B1_Mus1 SINE Alu -12 136 1 3 1204 7192 57 1 9 chr13 81183002 81183889 -39100423 + L1_Mus1 LINE L1 5674 6553 -14 3 1204 331 341 92 26 chr13 81185294 81185523 -39098789 - MLT1A LTR MaLR -115 259 16 3 1204 688 144 30 8 chr13 81185578 81185711 -39098601 - RMER1A Other Other -13 1017 882 3 1204 875 259 37 25 chr13 81185708 81185950 -39098362 - RMER1B Other Other -821 245 1 3 1204 471 48 0 0 chr13 81186084 81186146 -39098166 + (GATTG)n Simple_repeat Simple_repeat 2 63 0 3 1204 319 282 80 30 chr13 81186853 81187093 -39097219 + ORR1D1 LTR MaLR 6 259 -111 3 1204 730 199 43 0 chr13 81187378 81187519 -39096793 - B1_Mur2 SINE Alu -1 148 2 3 1204 28 0 0 0 chr13 81187988 81188016 -39096296 + AT_rich Low_complexity Low_complexity 1 28 0 3 1204 183 42 0 0 chr13 81188225 81188249 -39096063 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 3 1204 294 143 0 0 chr13 81188762 81188811 -39095501 + (TTCTCC)n Simple_repeat Simple_repeat 1 49 0 3 1204 740 269 48 0 chr13 81188811 81189019 -39095293 - ID_B1 SINE B4 -5 219 2 3 1204 426 213 0 0 chr13 81189177 81189271 -39095041 + (TATATG)n Simple_repeat Simple_repeat 2 95 0 3 1204 254 214 71 0 chr13 81189338 81189394 -39094918 + MurSatRep1 Unknown Unknown 202 261 -1876 3 1204 228 268 93 0 chr13 81190875 81190972 -39093340 + MER5A DNA MER1_type 4 109 -80 3 1204 209 98 24 0 chr13 81191063 81191104 -39093208 + (CAGAGA)n Simple_repeat Simple_repeat 3 44 0 3 1204 519 307 82 86 chr13 81191834 81192126 -39092186 - B4A SINE B4 0 292 2 3 1204 419 294 10 0 chr13 81193415 81193517 -39090795 - RSINE1 SINE B4 -57 108 6 3 1204 228 235 208 30 chr13 81193612 81193713 -39090599 + PB1 SINE Alu 4 122 -5 3 1204 2751 210 85 24 chr13 81194099 81194491 -39089821 - Lx7 LINE L1 -280 7416 6991 3 1204 225 0 0 0 chr13 81194491 81194516 -39089796 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1204 2751 210 85 24 chr13 81194516 81194758 -39089554 - Lx7 LINE L1 -706 6990 6743 3 1204 459 268 228 25 chr13 81194789 81195063 -39089249 - MTE2a LTR MaLR 0 379 53 3 1204 1064 222 0 14 chr13 81195511 81195721 -39088591 + B3 SINE B2 1 207 -9 3 1204 189 74 0 0 chr13 81195787 81195814 -39088498 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1204 468 0 0 0 chr13 81196054 81196106 -39088206 + (TTCTG)n Simple_repeat Simple_repeat 4 55 0 3 1204 942 158 0 7 chr13 81196106 81196243 -39088069 - B1_Mus1 SINE Alu -10 138 2 3 1204 211 227 23 0 chr13 81196249 81196293 -39088019 - B2_Mm2 SINE B2 -95 100 56 3 1204 884 43 8 0 chr13 81196327 81196444 -39087868 + (GGGAGA)n Simple_repeat Simple_repeat 3 120 0 3 1204 335 186 60 30 chr13 81196445 81196545 -39087767 - RLTR43A LTR ERVK -61 303 201 3 1204 2227 198 19 12 chr13 81196727 81197141 -39087171 - RNERVK23-int LTR ERVK -344 7062 6646 3 1204 460 290 0 8 chr13 81197397 81197529 -39086783 - RNERVK23-int LTR ERVK -300 6619 6489 3 1204 207 125 0 0 chr13 81197847 81197887 -39086425 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1204 5435 319 47 40 chr13 81198884 81202377 -39081935 - RNERVK23-int LTR ERVK -2504 5713 2196 3 1204 2100 151 73 24 chr13 81202702 81203083 -39081229 + RLTR9D LTR ERVK 1 400 -3 3 1204 1086 223 32 55 chr13 81203091 81203593 -39080719 + ETnERV2-int LTR ERVK 3 556 -2758 3 1204 228 67 0 0 chr13 81205501 81205531 -39078781 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1204 7953 216 36 18 chr13 81205557 81210713 -39073599 + ETnERV2-int LTR ERVK 584 6425 -981 3 1204 362 86 54 54 chr13 81210914 81210988 -39073324 + ETnERV2-int LTR ERVK 7331 7404 -2 3 1204 2381 133 58 3 chr13 81210991 81211368 -39072944 + RLTR9D LTR ERVK 3 400 -3 3 1204 409 326 45 53 chr13 81211374 81211883 -39072429 - RNERVK23-int LTR ERVK -6398 1819 943 3 1204 916 259 38 22 chr13 81212657 81212977 -39071335 - RNERVK23-int LTR ERVK -7703 514 190 3 1204 274 181 54 62 chr13 81213323 81213338 -39070974 - RLTR43A LTR ERVK -53 311 301 4 1204 563 27 14 0 chr13 81213338 81213411 -39070901 + (GA)n Simple_repeat Simple_repeat 1 74 0 4 1204 274 181 54 62 chr13 81213411 81213507 -39070805 - RLTR43A LTR ERVK -64 300 202 4 1204 278 130 109 18 chr13 81213692 81213747 -39070565 - B3 SINE B2 -156 60 1 4 1204 571 302 8 8 chr13 81213751 81213903 -39070409 - ID_B1 SINE B4 -45 247 92 4 1204 245 333 20 20 chr13 81213976 81213990 -39070322 - B3A SINE B2 -100 98 1 4 1204 305 321 0 0 chr13 81213990 81214074 -39070238 - B4A SINE B4 -208 84 1 4 1204 492 18 0 0 chr13 81215137 81215194 -39069118 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1204 1773 163 25 44 chr13 81216401 81216766 -39067546 + ORR1B2 LTR MaLR 1 358 -9 4 1204 476 305 230 40 chr13 81216804 81217282 -39067030 + MLT1F1 LTR MaLR 1 569 0 4 1204 337 305 85 8 chr13 81217398 81217527 -39066785 - B1F1 SINE Alu -9 140 2 4 1204 935 206 72 0 chr13 81217956 81218150 -39066162 + MTD LTR MaLR 212 419 0 4 1204 226 264 12 122 chr13 81220451 81220533 -39063779 - B3A SINE B2 -114 84 12 4 1204 2703 201 39 4 chr13 81221913 81222453 -39061859 - Lx5 LINE L1 0 7050 6492 4 1204 3575 40 8 89 chr13 81222596 81223113 -39061199 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1204 6567 55 13 12 chr13 81223115 81223941 -39060371 - IAPEz-int LTR ERVK -2 6479 5653 4 1204 2752 64 0 3 chr13 81223936 81224279 -39060033 - IAPEz-int LTR ERVK -4781 1700 1359 4 1204 4319 87 25 40 chr13 81224279 81225196 -39059116 - IAPEz-int LTR ERVK -5819 662 9 4 1204 3585 38 8 89 chr13 81225197 81225714 -39058598 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1204 624 204 0 0 chr13 81226568 81226671 -39057641 - Lx5 LINE L1 -141 6909 6807 4 1204 225 186 14 28 chr13 81226687 81226759 -39057553 + CT-rich Low_complexity Low_complexity 5 75 0 4 1204 246 369 36 0 chr13 81226778 81226889 -39057423 - PB1D7 SINE Alu -5 115 1 4 1204 874 212 106 0 chr13 81227220 81227418 -39056894 - ID_B1 SINE B4 -3 221 3 4 1204 755 176 97 21 chr13 81227577 81227763 -39056549 + ORR1C2 LTR MaLR 185 384 0 4 1204 365 248 177 67 chr13 81228360 81228524 -39055788 + B3A SINE B2 1 182 -16 4 1204 27 0 0 0 chr13 81228597 81228624 -39055688 + AT_rich Low_complexity Low_complexity 1 27 0 4 1204 640 241 98 16 chr13 81228758 81228952 -39055360 + B3 SINE B2 2 211 -5 4 1204 459 0 0 0 chr13 81229504 81229555 -39054757 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1204 226 258 63 21 chr13 81229995 81230090 -39054222 + MLT1A1 LTR MaLR 304 402 -6 4 1204 349 239 62 0 chr13 81230711 81230824 -39053488 - L1MB1 LINE L1 -175 5993 5874 4 1204 311 233 60 8 chr13 81230825 81230942 -39053370 + L1M3 LINE L1 5180 5302 -838 4 1204 796 156 7 66 chr13 81230952 81231095 -39053217 + B1_Mur4 SINE Alu 3 136 -14 4 1204 342 0 0 0 chr13 81231095 81231133 -39053179 + (CAAAA)n Simple_repeat Simple_repeat 5 42 0 4 1204 219 220 0 0 chr13 81232395 81232445 -39051867 + CT-rich Low_complexity Low_complexity 3 52 0 4 1204 822 164 15 0 chr13 81232577 81232711 -39051601 - B1_Mur4 SINE Alu -13 137 2 4 1204 417 20 0 0 chr13 81232751 81232801 -39051511 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1204 23 33 0 0 chr13 81233440 81233470 -39050842 + AT_rich Low_complexity Low_complexity 1 30 0 4 1204 596 186 144 8 chr13 81234744 81234869 -39049443 - B1_Mm SINE Alu -1 146 5 4 1204 535 231 25 17 chr13 81234915 81235034 -39049278 - PB1D7 SINE Alu 0 120 1 4 1204 2299 217 47 9 chr13 81236032 81236702 -39047610 + Lx7 LINE L1 5307 6001 -1695 4 1204 2883 94 38 5 chr13 81236702 81237096 -39047216 + MTB_Mm LTR MaLR 1 407 0 4 1204 4690 153 39 10 chr13 81237099 81237962 -39046350 + MTB_Mm-int LTR MaLR 6 893 -365 4 1204 1484 290 148 26 chr13 81237962 81238605 -39045707 + Lx7 LINE L1 6600 7320 -376 4 1204 216 203 26 26 chr13 81238665 81238741 -39045571 + GA-rich Low_complexity Low_complexity 1 76 0 4 1204 378 0 0 0 chr13 81240294 81240336 -39043976 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4 1204 299 218 42 84 chr13 81240744 81240839 -39043473 - Lx8 LINE L1 -100 7373 7283 4 1204 279 0 0 0 chr13 81241754 81241785 -39042527 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1204 1066 224 5 0 chr13 81243566 81243780 -39040532 - B3 SINE B2 0 216 2 4 1204 477 0 0 0 chr13 81244064 81244117 -39040195 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 4 1204 2505 223 10 2 chr13 81244172 81244679 -39039633 - Lx5 LINE L1 -3 7047 6537 4 1204 2170 158 62 0 chr13 81244682 81245055 -39039257 + L1_Mur2 LINE L1 5425 5820 -57 4 1204 379 253 85 20 chr13 81248638 81248791 -39035521 - B3 SINE B2 -1 215 53 4 1204 198 0 0 0 chr13 81249132 81249154 -39035158 + (TTGG)n Simple_repeat Simple_repeat 2 23 0 4 1204 1173 41 0 20 chr13 81249154 81249293 -39035019 - B1_Mm SINE Alu -8 139 1 4 1204 216 0 0 0 chr13 81249941 81249965 -39034347 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1204 279 0 0 0 chr13 81249965 81249995 -39034317 + (GA)n Simple_repeat Simple_repeat 1 31 0 4 1204 22 35 0 0 chr13 81249996 81250025 -39034287 + AT_rich Low_complexity Low_complexity 1 29 0 4 1204 374 265 29 29 chr13 81250603 81250739 -39033573 + Lx9 LINE L1 7360 7495 -149 4 1204 665 241 19 6 chr13 81250836 81250995 -39033317 + Lx6 LINE L1 7300 7460 0 4 1204 644 200 96 7 chr13 81251101 81251237 -39033075 - B1_Mus1 SINE Alu 0 148 1 4 1204 29973 125 21 65 chr13 81251240 81258052 -39026260 - L1_Mus1 LINE L1 0 6567 261 4 1204 636 276 60 18 chr13 81258275 81258441 -39025871 - B3 SINE B2 -25 191 19 4 1204 1365 192 46 114 chr13 81258507 81258919 -39025393 + ORR1C2 LTR MaLR 1 384 0 4 1204 460 263 26 0 chr13 81258919 81259033 -39025279 - B1F SINE Alu -14 135 19 4 1204 2608 110 37 46 chr13 81260979 81261435 -39022877 - RLTR11B LTR ERVK -1 452 1 4 1204 396 0 0 0 chr13 81262198 81262242 -39022070 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1204 2093 154 60 0 chr13 81262636 81263000 -39021312 - ORR1B1 LTR MaLR -8 386 1 4 1205 218 32 32 0 chr13 81265398 81265429 -39018883 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 4 1205 623 276 80 67 chr13 81266301 81266400 -39017912 + RMER10A LTR ERVL 127 229 -213 4 1205 2124 174 18 8 chr13 81266400 81266789 -39017523 - ORR1B1 LTR MaLR 0 394 2 4 1205 623 276 80 67 chr13 81266789 81266988 -39017324 + RMER10A LTR ERVL 230 429 -13 4 1205 2302 111 127 15 chr13 81267571 81267964 -39016348 + RLTR9B LTR ERVK 1 437 0 4 1205 720 230 150 20 chr13 81267997 81268269 -39016043 - L1MA6 LINE L1 -116 6055 5769 4 1205 518 303 49 68 chr13 81268327 81268635 -39015677 - Lx8 LINE L1 -17 7456 7155 4 1205 1019 256 70 76 chr13 81268665 81269261 -39015051 - L1MA6 LINE L1 -511 5780 5169 4 1205 232 216 78 0 chr13 81269295 81269346 -39014966 - RSINE1 SINE B4 -4 161 107 4 1205 271 290 48 29 chr13 81269424 81269527 -39014785 + B4A SINE B4 188 292 0 4 1205 22 70 0 0 chr13 81270627 81270670 -39013642 + AT_rich Low_complexity Low_complexity 1 43 0 4 1205 429 36 0 0 chr13 81270749 81270804 -39013508 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 1205 182 62 31 0 chr13 81271362 81271394 -39012918 + (CACCC)n Simple_repeat Simple_repeat 1 33 0 4 1205 233 207 46 0 chr13 81271575 81271662 -39012650 + CT-rich Low_complexity Low_complexity 2 92 0 4 1205 225 0 0 0 chr13 81271963 81271988 -39012324 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1205 227 31 31 0 chr13 81272767 81272799 -39011513 + (TTCTCC)n Simple_repeat Simple_repeat 1 33 0 4 1205 515 132 11 0 chr13 81272923 81273014 -39011298 + (GA)n Simple_repeat Simple_repeat 1 92 0 4 1205 613 261 55 33 chr13 81273091 81273273 -39011039 + B3A SINE B2 3 188 -10 4 1205 1247 178 222 38 chr13 81273387 81273760 -39010552 - RMER10A LTR ERVL 0 442 1 4 1205 236 336 32 52 chr13 81273983 81274137 -39010175 - ORR1E LTR MaLR -190 169 19 4 1205 535 290 88 94 chr13 81274205 81274536 -39009776 - MER2 DNA MER2_type 0 345 17 4 1205 208 224 0 82 chr13 81274821 81274894 -39009418 + GA-rich Low_complexity Low_complexity 5 71 0 4 1205 306 323 100 0 chr13 81277584 81277714 -39006598 + ID_B1 SINE B4 82 224 0 4 1205 27 0 0 0 chr13 81277825 81277852 -39006460 + AT_rich Low_complexity Low_complexity 1 27 0 4 1205 383 301 54 47 chr13 81277862 81277991 -39006321 + B4A SINE B4 5 134 -158 4 1205 359 276 113 40 chr13 81278023 81278174 -39006138 + RSINE1 SINE B4 3 164 -1 4 1205 201 250 0 0 chr13 81278181 81278241 -39006071 + (CATA)n Simple_repeat Simple_repeat 3 62 0 4 1205 231 325 149 25 chr13 81279120 81279281 -39005031 + MLT2B3 LTR ERVL 20 200 -354 4 1205 638 256 79 24 chr13 81279177 81279453 -39004859 + MTEb LTR MaLR 69 362 -17 4 1205 249 316 10 10 chr13 81279625 81279721 -39004591 + Tigger5 DNA MER2_type 2173 2268 -138 4 1205 920 91 26 0 chr13 81280881 81281035 -39003277 + (TCC)n Simple_repeat Simple_repeat 3 160 0 4 1205 756 174 25 0 chr13 81281038 81281159 -39003153 - B1_Mur4 SINE Alu -12 138 15 4 1205 369 0 0 0 chr13 81281388 81281429 -39002883 + (T)n Simple_repeat Simple_repeat 1 41 0 4 1205 495 0 0 0 chr13 81282053 81282108 -39002204 + (GA)n Simple_repeat Simple_repeat 1 55 0 4 1205 618 39 0 0 chr13 81282108 81282185 -39002127 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 4 1205 325 263 132 0 chr13 81283006 81283120 -39001192 + Tigger5 DNA MER2_type 2159 2287 -119 4 1205 718 256 42 42 chr13 81284609 81284801 -38999511 - B3A SINE B2 -6 192 1 4 1205 503 262 92 0 chr13 81285020 81285161 -38999151 - B3A SINE B2 -39 159 6 4 1205 1661 178 84 18 chr13 81285357 81285689 -38998623 + ORR1B1 LTR MaLR 41 394 0 4 1205 23 33 0 0 chr13 81285693 81285723 -38998589 + AT_rich Low_complexity Low_complexity 1 30 0 4 1205 682 286 137 23 chr13 81285893 81286237 -38998075 - Lx9 LINE L1 -304 7340 6958 4 1205 487 132 22 0 chr13 81287775 81287866 -38996446 + (TA)n Simple_repeat Simple_repeat 1 93 0 4 1205 230 342 0 14 chr13 81287978 81288052 -38996260 + ID4 SINE ID 2 74 -9 4 1205 1305 88 28 0 chr13 81288249 81288430 -38995882 + B2_Mm2 SINE B2 2 187 -8 5 1205 261 75 0 0 chr13 81288539 81288579 -38995733 + (CCAA)n Simple_repeat Simple_repeat 4 43 0 5 1205 447 215 118 0 chr13 81290103 81290196 -38994116 + B3A SINE B2 6 109 -89 5 1205 3630 176 32 12 chr13 81291177 81291855 -38992457 + RLTR17 LTR ERVK 1 692 0 5 1205 2786 158 90 13 chr13 81292395 81292927 -38991385 + RMER15 LTR ERVL 3 575 0 5 1205 235 309 16 16 chr13 81293329 81293416 -38990896 - ID4 SINE ID -61 91 4 5 1205 21 0 0 0 chr13 81293683 81293704 -38990608 + AT_rich Low_complexity Low_complexity 1 21 0 5 1205 896 223 20 25 chr13 81294860 81295058 -38989254 - B3A SINE B2 -1 197 1 5 1205 30 0 0 0 chr13 81295593 81295623 -38988689 + AT_rich Low_complexity Low_complexity 1 30 0 5 1205 573 97 40 16 chr13 81295641 81295767 -38988545 + (TATG)n Simple_repeat Simple_repeat 2 130 0 5 1205 633 281 24 30 chr13 81295773 81295938 -38988374 - RSINE1 SINE B4 0 165 2 5 1205 689 237 56 178 chr13 81296081 81296513 -38987799 + MTE2a LTR MaLR 1 379 0 5 1205 276 255 40 75 chr13 81296619 81296793 -38987519 - L1MC4 LINE L1 -643 7399 7232 5 1205 338 260 207 11 chr13 81296793 81296972 -38987340 - L1MC4 LINE L1 -970 7072 6859 5 1205 558 239 130 74 chr13 81297287 81297517 -38986795 - Tigger7 DNA MER2_type -2054 437 195 5 1205 463 324 30 5 chr13 81297658 81297841 -38986471 - Tigger7 DNA MER2_type -427 278 94 5 1205 195 129 0 0 chr13 81298279 81298310 -38986002 + (GAAAA)n Simple_repeat Simple_repeat 5 35 0 5 1205 21 0 0 0 chr13 81298343 81298364 -38985948 + AT_rich Low_complexity Low_complexity 1 21 0 5 1205 1075 87 0 0 chr13 81298560 81298698 -38985614 + B1_Mus1 SINE Alu 2 139 -9 5 1205 771 266 53 53 chr13 81299744 81300237 -38984075 + L1MB4 LINE L1 5258 5750 -430 5 1205 485 278 80 58 chr13 81300294 81300519 -38983793 + MLT1A0 LTR MaLR 112 341 -24 5 1205 579 306 66 19 chr13 81300537 81300857 -38983455 + L1MB4 LINE L1 5811 6145 -35 5 1205 255 193 24 12 chr13 81301002 81301086 -38983226 + (TA)n Simple_repeat Simple_repeat 1 85 0 5 1205 253 290 0 11 chr13 81301101 81301195 -38983117 + Lx8 LINE L1 7380 7472 -1 5 1205 681 66 0 0 chr13 81301375 81301466 -38982846 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 5 1205 646 283 100 45 chr13 81302382 81302712 -38981600 + Lx8 LINE L1 6598 6945 -528 5 1205 219 125 17 35 chr13 81302717 81302760 -38981552 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1205 243 0 0 0 chr13 81302760 81302787 -38981525 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1205 219 125 17 35 chr13 81302787 81302801 -38981511 + (TA)n Simple_repeat Simple_repeat 2 15 0 5 1205 378 74 0 0 chr13 81302850 81302904 -38981408 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1205 654 297 107 24 chr13 81303008 81303047 -38981265 + Lx8 LINE L1 7103 7141 -332 5 1205 513 0 0 0 chr13 81303047 81303104 -38981208 + (TC)n Simple_repeat Simple_repeat 2 58 0 5 1205 324 0 0 0 chr13 81303104 81303139 -38981173 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1205 654 297 107 24 chr13 81303139 81303436 -38980876 + Lx8 LINE L1 7142 7467 -6 5 1205 21 0 0 0 chr13 81303457 81303478 -38980834 + AT_rich Low_complexity Low_complexity 1 21 0 5 1205 922 266 171 27 chr13 81303586 81303979 -38980333 + MLT2B1 LTR ERVL 9 454 -101 5 1205 356 235 51 7 chr13 81304010 81304147 -38980165 + (TCTA)n Simple_repeat Simple_repeat 4 146 0 5 1205 447 19 0 0 chr13 81304414 81304466 -38979846 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1205 354 232 14 0 chr13 81304684 81304753 -38979559 - RSINE1 SINE B4 -93 72 3 5 1205 243 246 43 71 chr13 81306420 81306490 -38977822 - B1_Mur3 SINE Alu -82 68 1 5 1205 630 229 61 0 chr13 81306936 81307067 -38977245 + B1_Mur2 SINE Alu 3 141 -8 5 1205 224 30 30 0 chr13 81307072 81307105 -38977207 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1205 768 249 55 0 chr13 81307138 81307303 -38977009 + B3 SINE B2 33 206 -10 5 1205 191 133 0 22 chr13 81307489 81307535 -38976777 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 5 1205 243 61 0 0 chr13 81307698 81307731 -38976581 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 5 1205 423 145 0 0 chr13 81307754 81307837 -38976475 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 1205 446 0 19 0 chr13 81308142 81308196 -38976116 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 5 1205 3380 30 5 0 chr13 81308882 81309276 -38975036 + MTA_Mm LTR MaLR 1 396 0 5 1205 31 44 0 0 chr13 81310004 81310049 -38974263 + AT_rich Low_complexity Low_complexity 1 45 0 5 1205 421 214 0 0 chr13 81310228 81310298 -38974014 + PB1D9 SINE Alu 3 72 -48 5 1205 23 0 0 0 chr13 81311482 81311505 -38972807 + AT_rich Low_complexity Low_complexity 1 23 0 5 1205 459 0 0 0 chr13 81311967 81312018 -38972294 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1205 307 317 137 67 chr13 81312429 81312743 -38971569 + MLT1A0 LTR MaLR 19 354 -11 5 1205 1917 222 81 11 chr13 81312844 81313313 -38970999 + RLTR11A2 LTR ERVK 2 503 -24 5 1205 1271 227 104 72 chr13 81313743 81314241 -38970071 + RMER13A LTR ERVK 1 514 -346 5 1205 330 170 10 21 chr13 81315554 81315650 -38968662 + (TA)n Simple_repeat Simple_repeat 2 96 0 5 1205 384 256 47 0 chr13 81316608 81316694 -38967618 - 5S rRNA rRNA -31 90 1 5 1205 560 101 11 0 chr13 81318201 81318290 -38966022 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 5 1205 415 232 10 31 chr13 81318502 81318600 -38965712 + PB1D7 SINE Alu 23 118 -2 5 1205 244 331 35 14 chr13 81318618 81318762 -38965550 + L1MB7 LINE L1 5558 5704 -470 5 1205 243 317 21 28 chr13 81318750 81318893 -38965419 + L1MB7 LINE L1 6030 6171 -13 5 1205 31 26 0 0 chr13 81319598 81319636 -38964676 + AT_rich Low_complexity Low_complexity 1 38 0 5 1205 3439 134 57 11 chr13 81319636 81320249 -38964063 - Lx LINE L1 -25 6629 5989 5 1205 189 74 0 0 chr13 81321852 81321879 -38962433 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1205 1130 75 0 0 chr13 81322274 81322421 -38961891 + B1_Mus1 SINE Alu 2 148 0 5 1205 208 119 48 0 chr13 81322423 81322465 -38961847 + A-rich Low_complexity Low_complexity 2 45 0 5 1205 524 306 98 4 chr13 81322647 81322913 -38961399 + B4 SINE B4 2 292 0 5 1205 269 237 17 0 chr13 81322996 81323055 -38961257 + RMER15 LTR ERVL 1 60 -515 5 1205 667 196 153 0 chr13 81323200 81323363 -38960949 + RMER1C Other Other 1153 1340 -2 5 1205 438 369 12 60 chr13 81323463 81323630 -38960682 + B3A SINE B2 1 159 -39 5 1205 204 40 0 0 chr13 81323633 81323658 -38960654 + (T)n Simple_repeat Simple_repeat 1 25 0 5 1205 1372 214 132 14 chr13 81323658 81324022 -38960290 + MTD LTR MaLR 13 419 0 5 1205 25 51 0 0 chr13 81324056 81324095 -38960217 + AT_rich Low_complexity Low_complexity 1 39 0 5 1205 2800 151 34 2 chr13 81325144 81325610 -38958702 - RLTR28B LTR ERVL 0 481 1 5 1205 25 0 0 0 chr13 81325815 81325840 -38958472 + AT_rich Low_complexity Low_complexity 1 25 0 5 1205 271 302 27 36 chr13 81326691 81326801 -38957511 + LTR85c LTR Gypsy? 709 817 -6 5 1205 512 198 154 31 chr13 81327703 81327833 -38956479 - B1_Mur1 SINE Alu -2 147 2 5 1205 274 325 47 8 chr13 81327840 81327967 -38956345 - B1F1 SINE Alu -4 145 14 5 1205 2996 119 20 0 chr13 81328153 81328608 -38955704 - Lx2 LINE L1 -2 6995 6532 5 1205 285 323 30 0 chr13 81329133 81329232 -38955080 + MER5A1 DNA MER1_type 30 131 -35 5 1205 335 283 60 11 chr13 81330082 81330197 -38954115 + PB1D9 SINE Alu 17 130 -20 5 1205 1219 182 9 35 chr13 81330232 81330460 -38953852 + URR1B DNA MER1_type 2 223 -2 5 1205 438 297 16 44 chr13 81330871 81331054 -38953258 + Tigger10 DNA Tigger 679 856 -987 5 1205 561 123 17 17 chr13 81331199 81331315 -38952997 + (TCTA)n Simple_repeat Simple_repeat 3 118 0 5 1205 588 288 22 45 chr13 81332487 81332756 -38951556 - L1MA6 LINE L1 -120 6180 5918 5 1205 538 241 86 8 chr13 81332753 81332960 -38951352 - L1MA6 LINE L1 -587 5710 5476 5 1205 1028 99 28 0 chr13 81332982 81333123 -38951189 + B1_Mus2 SINE Alu 1 145 -2 5 1205 252 255 128 61 chr13 81333257 81333453 -38950859 - L1MA6 LINE L1 -783 5360 5152 5 1205 305 269 46 0 chr13 81333455 81333585 -38950727 - L1MA6 LINE L1 -1099 5044 4909 5 1205 33809 44 1 3 chr13 81333942 81339177 -38945135 + L1Md_T LINE L1 269 5589 -297 5 1205 9043 5 0 0 chr13 81339177 81340173 -38944139 + L1Md_T LINE L1 5590 6585 0 5 1205 15406 20 0 0 chr13 81340173 81342046 -38942266 + L1Md_T LINE L1 3714 5586 -297 5 1205 8529 30 0 0 chr13 81342046 81343042 -38941270 + L1Md_T LINE L1 5587 6582 0 5 1205 227 336 17 50 chr13 81343418 81343537 -38940775 + MTEb LTR MaLR 262 376 -3 5 1205 562 242 93 0 chr13 81344243 81344437 -38939875 + Lx9 LINE L1 7404 7615 -29 5 1205 198 0 0 0 chr13 81344437 81344459 -38939853 + (AAATG)n Simple_repeat Simple_repeat 3 24 0 5 1205 626 306 142 22 chr13 81345727 81346128 -38938184 + Lx8 LINE L1 6991 7439 -34 5 1205 445 261 126 44 chr13 81346290 81346483 -38937829 + MLT1A0 LTR MaLR 184 394 -111 5 1205 381 260 41 10 chr13 81348308 81348405 -38935907 + PB1 SINE Alu 26 125 -2 5 1205 267 226 86 0 chr13 81348459 81348552 -38935760 + Lx4B LINE L1 6958 7058 0 5 1205 30 0 0 0 chr13 81348552 81348582 -38935730 + AT_rich Low_complexity Low_complexity 1 30 0 5 1205 556 207 259 29 chr13 81348584 81348758 -38935554 + B3 SINE B2 2 215 -1 5 1205 23 68 0 0 chr13 81350006 81350050 -38934262 + AT_rich Low_complexity Low_complexity 1 44 0 5 1205 216 0 0 0 chr13 81350200 81350224 -38934088 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1205 430 254 22 22 chr13 81350283 81350420 -38933892 + GA-rich Low_complexity Low_complexity 1 137 0 5 1205 419 387 61 38 chr13 81350421 81350767 -38933545 + LTR78 LTR ERV1 295 648 -656 5 1205 3702 85 29 1 chr13 81351467 81352123 -38932189 + L1VL4 LINE L1 401 1075 -2484 5 1205 17275 161 8 6 chr13 81352111 81353756 -38930556 + L1_Mur1 LINE L1 2003 3649 -2237 5 1205 225 65 0 0 chr13 81353756 81353787 -38930525 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1205 17275 161 8 6 chr13 81353787 81355445 -38928867 + L1_Mur1 LINE L1 3650 5311 -575 5 1205 2768 175 122 5 chr13 81355449 81356053 -38928259 + Lx LINE L1 5979 6653 -1 5 1205 345 145 0 0 chr13 81356378 81356454 -38927858 + (TG)n Simple_repeat Simple_repeat 2 77 0 5 1205 5058 61 18 3 chr13 81356510 81357164 -38927148 - L1Md_F2 LINE L1 -2 6580 5917 6 1205 6120 47 2 0 chr13 81357164 81358004 -38926308 + L1Md_F2 LINE L1 5090 5931 -651 6 1205 195 42 0 0 chr13 81358442 81358466 -38925846 + (CCCCCT)n Simple_repeat Simple_repeat 3 26 0 6 1205 658 55 133 111 chr13 81359151 81359297 -38925015 + L1Md_F2 LINE L1 6459 6582 0 6 1205 912 242 45 12 chr13 81359583 81359826 -38924486 + Lx7 LINE L1 7168 7418 -278 6 1205 280 237 51 44 chr13 81359871 81360008 -38924304 + Lx7 LINE L1 7559 7696 0 6 1205 196 327 0 18 chr13 81360028 81360084 -38924228 - L2 LINE L2 -340 3079 3025 6 1205 872 233 245 5 chr13 81360317 81360701 -38923611 - L1_Mur3 LINE L1 -1349 4531 4056 6 1205 1516 178 25 25 chr13 81360844 81361291 -38923021 + L1_Mur3 LINE L1 959 1413 -4467 6 1205 24 67 0 0 chr13 81361985 81362030 -38922282 + AT_rich Low_complexity Low_complexity 1 45 0 6 1205 1637 141 229 25 chr13 81363373 81363700 -38920612 - ORR1B1 LTR MaLR 0 394 1 6 1205 252 0 0 0 chr13 81364095 81364123 -38920189 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1205 237 386 132 9 chr13 81364487 81364699 -38919613 + MLT1K LTR MaLR 334 571 -24 6 1205 188 67 0 32 chr13 81364732 81364763 -38919549 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 6 1205 1069 31 0 15 chr13 81364782 81364913 -38919399 - B1_Mm SINE Alu -18 129 1 6 1205 408 155 0 0 chr13 81365318 81365389 -38918923 + T-rich Low_complexity Low_complexity 1 71 0 6 1205 453 137 263 0 chr13 81365389 81365484 -38918828 - PB1D9 SINE Alu 0 120 1 6 1205 1424 292 188 17 chr13 81365837 81366528 -38917784 + Lx8 LINE L1 6105 6913 -560 6 1205 471 18 0 0 chr13 81366910 81366966 -38917346 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 6 1205 948 157 0 0 chr13 81366966 81367132 -38917180 + (TGGA)n Simple_repeat Simple_repeat 3 168 0 6 1205 297 75 0 0 chr13 81367132 81367172 -38917140 + (CAGA)n Simple_repeat Simple_repeat 1 40 0 6 1205 2208 192 39 14 chr13 81369900 81370466 -38913846 - Lx2B LINE L1 -13 6987 6348 6 1205 294 29 0 0 chr13 81371356 81371391 -38912921 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1205 469 271 125 0 chr13 81371588 81371732 -38912580 + B3A SINE B2 15 176 -22 6 1205 294 274 104 17 chr13 81371964 81372079 -38912233 + MIR SINE MIR 6 130 -132 6 1205 258 32 0 0 chr13 81373023 81373054 -38911258 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 6 1205 184 208 19 77 chr13 81373203 81373255 -38911057 + L3 LINE CR1 2909 2957 -1532 6 1205 182 274 20 0 chr13 81374109 81374160 -38910152 + MER5B DNA MER1_type 127 178 0 6 1205 973 124 0 0 chr13 81375413 81375550 -38908762 + B1_Mus2 SINE Alu 1 137 -10 6 1205 288 253 0 0 chr13 81377570 81377649 -38906663 + (CATA)n Simple_repeat Simple_repeat 2 80 0 6 1205 192 77 0 0 chr13 81378740 81378766 -38905546 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1205 1217 35 0 0 chr13 81378766 81378911 -38905401 - B1_Mm SINE Alu 0 147 3 6 1205 882 129 12 6 chr13 81379905 81380069 -38904243 + (TCC)n Simple_repeat Simple_repeat 1 165 0 6 1205 336 24 0 0 chr13 81381838 81381879 -38902433 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1205 266 226 9 0 chr13 81381888 81381994 -38902318 + GA-rich Low_complexity Low_complexity 1 107 0 6 1205 2145 155 51 24 chr13 81382076 81382486 -38901826 + MTC LTR MaLR 1 421 0 6 1205 204 107 28 55 chr13 81382723 81382832 -38901480 + (TTTAA)n Simple_repeat Simple_repeat 2 107 0 6 1205 25673 82 1 7 chr13 81384043 81385117 -38899195 - L1Md_F2 LINE L1 0 6582 5530 6 1205 1085 89 7 0 chr13 81385117 81385263 -38899049 + B1_Mus1 SINE Alu 2 148 0 6 1205 25673 111 22 25 chr13 81385263 81386520 -38897792 - L1Md_F2 LINE L1 -354 5529 4275 6 1205 530 78 78 0 chr13 81386520 81386597 -38897715 - BC1_Mm scRNA scRNA -68 84 2 6 1205 25673 111 22 25 chr13 81386597 81390442 -38893870 - L1Md_F2 LINE L1 -354 4274 432 6 1205 565 325 124 46 chr13 81391021 81391369 -38892943 + Arthur1 DNA Tip100 1 375 -3572 6 1205 311 302 203 24 chr13 81391432 81391683 -38892629 + Arthur1 DNA Tip100 506 801 -3146 6 1205 521 30 15 0 chr13 81391962 81392029 -38892283 + (TG)n Simple_repeat Simple_repeat 1 68 0 6 1205 1262 307 63 2 chr13 81392097 81392560 -38891752 + Lx8 LINE L1 6268 6758 -715 6 1205 2084 174 89 3 chr13 81392565 81392945 -38891367 - MTC LTR MaLR 0 421 9 6 1205 1711 264 47 43 chr13 81392945 81393028 -38891284 + Lx8 LINE L1 6760 6855 -618 6 1205 2051 180 84 39 chr13 81393028 81393565 -38890747 + RLTR31_Mm LTR ERVK 1 561 0 6 1205 1711 264 47 43 chr13 81393565 81394040 -38890272 + Lx8 LINE L1 6856 7320 -153 6 1205 373 269 88 0 chr13 81394162 81394333 -38889979 + Arthur1 DNA Tip100 3670 3855 -92 6 1205 2139 51 14 0 chr13 81394334 81394609 -38889703 - L1Md_F2 LINE L1 -5 6577 6299 6 1205 1573 26 0 0 chr13 81394609 81394800 -38889512 + L1Md_F2 LINE L1 5948 6138 -444 6 150 6349 32 0 0 chr13 81395217 81395963 -38888349 + L1Md_T LINE L1 5837 6582 0 6 1206 419 276 52 52 chr13 81395974 81396108 -38888204 + ID_B1 SINE B4 81 214 -10 6 1206 213 286 0 28 chr13 81396601 81396673 -38887639 + CT-rich Low_complexity Low_complexity 4 73 0 6 1206 204 40 0 0 chr13 81396878 81396903 -38887409 + (TATG)n Simple_repeat Simple_repeat 2 26 0 6 1206 276 187 0 52 chr13 81397105 81397201 -38887111 + CT-rich Low_complexity Low_complexity 6 96 0 6 1206 4688 87 5 9 chr13 81397870 81398519 -38885793 + Lx LINE L1 6008 6653 -1 6 1206 559 291 101 36 chr13 81398537 81398814 -38885498 + L1M2 LINE L1 5263 5549 -751 6 1206 1719 198 20 32 chr13 81398814 81399217 -38885095 + RMER10B LTR ERVL 1 398 0 6 1206 559 291 101 36 chr13 81399217 81399413 -38884899 + L1M2 LINE L1 5550 5767 -533 6 1206 276 100 0 0 chr13 81400068 81400108 -38884204 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1206 997 105 28 7 chr13 81400108 81400252 -38884060 - B1_Mus2 SINE Alu 0 147 1 6 1206 398 316 101 29 chr13 81400552 81400829 -38883483 + Lx8 LINE L1 6933 7229 -244 6 1206 660 235 153 80 chr13 81400881 81401182 -38883130 + RLTR9A LTR ERVK 38 360 -8 6 1206 24 77 0 0 chr13 81401185 81401237 -38883075 + AT_rich Low_complexity Low_complexity 1 52 0 6 1206 1187 269 61 59 chr13 81401407 81401782 -38882530 - MTE2b LTR MaLR 0 379 4 6 1206 334 161 45 0 chr13 81403253 81403365 -38880947 + (TA)n Simple_repeat Simple_repeat 1 117 0 6 1206 563 311 46 48 chr13 81403569 81403974 -38880338 - L1PB4 LINE L1 -275 5881 5449 6 1206 402 143 0 0 chr13 81404352 81404429 -38879883 + (CA)n Simple_repeat Simple_repeat 2 78 0 6 1206 482 294 25 38 chr13 81404803 81404962 -38879350 + RSINE1 SINE B4 3 159 -6 6 1206 447 101 0 0 chr13 81405226 81405305 -38879007 + (CAGA)n Simple_repeat Simple_repeat 2 80 0 6 1206 180 143 0 0 chr13 81405308 81405350 -38878962 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1206 231 36 0 0 chr13 81406096 81406124 -38878188 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1206 428 248 38 23 chr13 81406463 81406595 -38877717 + ETnERV-int LTR ERVK 99 232 -3082 6 1206 875 153 9 12 chr13 81406618 81406785 -38877527 - RLTR9B2 LTR ERVK -203 165 1 6 1206 2973 57 3 0 chr13 81406800 81407172 -38877140 - L1_Mus1 LINE L1 0 6567 6195 6 1206 189 0 0 0 chr13 81407737 81407758 -38876554 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1206 216 389 40 20 chr13 81410540 81410692 -38873620 - L2b LINE L2 -1 3425 3271 6 1206 24 0 0 0 chr13 81412118 81412142 -38872170 + AT_rich Low_complexity Low_complexity 1 24 0 6 1206 1206 54 0 0 chr13 81412142 81412289 -38872023 - B1_Mm SINE Alu 0 147 1 6 1206 37 23 0 0 chr13 81412475 81412519 -38871793 + AT_rich Low_complexity Low_complexity 1 44 0 6 1206 270 0 0 0 chr13 81412519 81412549 -38871763 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1206 450 0 0 0 chr13 81412549 81412598 -38871714 + (GA)n Simple_repeat Simple_repeat 1 50 0 6 1206 414 268 276 0 chr13 81412599 81412726 -38871586 - B3A SINE B2 -36 162 1 6 1206 499 341 7 0 chr13 81412736 81412874 -38871438 - ID_B1 SINE B4 -7 217 79 6 1206 401 0 20 0 chr13 81413350 81413399 -38870913 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 1206 180 0 0 0 chr13 81413399 81413418 -38870894 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1206 354 303 26 35 chr13 81413540 81413653 -38870659 + PB1D9 SINE Alu 8 119 -1 6 1206 21 0 0 0 chr13 81413664 81413685 -38870627 + AT_rich Low_complexity Low_complexity 1 21 0 6 1206 2900 119 58 21 chr13 81414058 81414287 -38870025 - Lx LINE L1 -8 6646 6427 6 1206 462 114 0 0 chr13 81414287 81414357 -38869955 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1206 2900 119 58 21 chr13 81414357 81414609 -38869703 - Lx LINE L1 -228 6426 6148 6 1206 21 82 0 0 chr13 81414762 81414811 -38869501 + AT_rich Low_complexity Low_complexity 1 49 0 6 1206 216 97 0 0 chr13 81414918 81414949 -38869363 + (TC)n Simple_repeat Simple_repeat 2 32 0 6 1206 3936 53 22 0 chr13 81415022 81415646 -38868666 - L1_Mus3 LINE L1 -671 5967 5331 6 1206 4585 109 32 4 chr13 81415646 81416336 -38867976 + L1_Mus3 LINE L1 5924 6632 -6 6 1206 25 95 0 0 chr13 81416372 81416446 -38867866 + AT_rich Low_complexity Low_complexity 1 74 0 6 1206 234 58 37 37 chr13 81418794 81418848 -38865464 + (CAAAAA)n Simple_repeat Simple_repeat 1 54 0 6 1206 808 197 20 0 chr13 81418942 81419089 -38865223 - RSINE1 SINE B4 -13 152 3 6 1206 299 172 0 0 chr13 81419248 81419306 -38865006 - B3 SINE B2 -6 210 153 6 1206 294 29 0 0 chr13 81419377 81419412 -38864900 + (TTG)n Simple_repeat Simple_repeat 2 36 0 6 1206 492 258 23 8 chr13 81420858 81420987 -38863325 - L3 LINE CR1 -851 3638 3508 6 1206 1887 106 44 85 chr13 81421956 81422297 -38862015 + ORR1A2 LTR MaLR 1 327 0 6 1206 312 143 0 0 chr13 81423081 81423137 -38861175 + (CCA)n Simple_repeat Simple_repeat 1 56 0 6 1206 292 345 59 0 chr13 81423142 81423261 -38861051 + L2a LINE L2 3299 3424 -2 6 1206 933 219 112 26 chr13 81423370 81423569 -38860743 + RMER13A LTR ERVK 177 389 -471 6 1206 192 125 0 0 chr13 81423569 81423601 -38860711 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1206 933 219 112 26 chr13 81423601 81423668 -38860644 + RMER13A LTR ERVK 390 466 -394 6 1206 17843 151 16 10 chr13 81423811 81427445 -38856867 - MusHAL1 LINE L1 -1191 4695 1040 6 1206 32 91 0 0 chr13 81427530 81427618 -38856694 + AT_rich Low_complexity Low_complexity 1 88 0 6 1206 21 0 0 0 chr13 81427640 81427661 -38856651 + AT_rich Low_complexity Low_complexity 1 21 0 6 1206 1818 178 5 24 chr13 81428334 81428744 -38855568 + L1_Mur1 LINE L1 826 1227 -5755 6 1206 736 235 0 0 chr13 81428732 81428885 -38855427 + Lx2B LINE L1 6406 6558 -442 7 1206 471 35 0 0 chr13 81428988 81429045 -38855267 + (TA)n Simple_repeat Simple_repeat 1 57 0 7 1206 24 32 0 0 chr13 81429200 81429231 -38855081 + AT_rich Low_complexity Low_complexity 1 31 0 7 1206 278 152 0 17 chr13 81429427 81429487 -38854825 + (CA)n Simple_repeat Simple_repeat 2 60 0 7 1206 278 322 66 33 chr13 81429602 81429724 -38854588 + Charlie13a DNA Charlie 975 1100 -414 7 1206 189 0 0 0 chr13 81429789 81429810 -38854502 + (TTTG)n Simple_repeat Simple_repeat 1 21 0 7 1206 537 306 36 8 chr13 81430028 81430278 -38854034 - Lx9 LINE L1 -289 7355 7099 7 1206 799 39 39 0 chr13 81431974 81432077 -38852235 + L1Md_F2 LINE L1 5480 5586 -297 7 1206 7545 65 8 9 chr13 81432078 81433074 -38851238 + L1Md_F2 LINE L1 5588 6582 0 7 1206 426 20 0 0 chr13 81433094 81433145 -38851167 + (TG)n Simple_repeat Simple_repeat 2 52 0 7 1206 635 329 22 22 chr13 81433161 81433388 -38850924 - B4A SINE B4 -20 272 46 7 1206 5661 147 22 0 chr13 81433729 81434661 -38849651 + Lx3B LINE L1 6015 6967 -6 7 1206 22 0 0 0 chr13 81434675 81434697 -38849615 + AT_rich Low_complexity Low_complexity 1 22 0 7 1206 409 303 135 35 chr13 81434755 81434984 -38849328 - L1ME3 LINE L1 -68 6094 5843 7 1206 259 250 0 67 chr13 81435326 81435386 -38848926 - ID4 SINE ID -6 77 22 7 1206 373 336 109 0 chr13 81435431 81435559 -38848753 - B1F1 SINE Alu -7 142 1 7 1206 6679 51 34 3 chr13 81436109 81437013 -38847299 - L1_Mus3 LINE L1 -6 6632 5701 7 1206 1150 159 87 0 chr13 81437276 81437483 -38846829 - URR1A DNA MER1_type -1 225 1 7 1206 248 327 154 34 chr13 81438150 81438384 -38845928 + L2a LINE L2 2910 3171 -255 7 1206 689 170 23 17 chr13 81438871 81439045 -38845267 + G-rich Low_complexity Low_complexity 2 176 0 7 1206 361 328 0 105 chr13 81439109 81439252 -38845060 - B4 SINE B4 -155 137 10 7 1206 254 210 45 80 chr13 81439601 81439689 -38844623 + MLT1B LTR MaLR 60 144 -246 7 1206 195 325 74 12 chr13 81439935 81440016 -38844296 - L2c LINE L2 -200 3187 3102 7 1206 190 356 33 0 chr13 81440058 81440148 -38844164 - MIRc SINE MIR -146 122 30 7 1206 243 0 0 0 chr13 81440192 81440219 -38844093 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1206 1071 110 0 0 chr13 81441705 81441851 -38842461 - B1_Mus1 SINE Alu -2 146 1 7 1206 310 123 30 15 chr13 81443073 81443139 -38841173 + CT-rich Low_complexity Low_complexity 3 69 0 7 1206 378 0 0 0 chr13 81443366 81443408 -38840904 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1206 396 59 0 0 chr13 81443975 81444026 -38840286 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 1206 1162 38 0 12 chr13 81444029 81444191 -38840121 + (GGAA)n Simple_repeat Simple_repeat 2 161 0 7 1206 1174 75 0 0 chr13 81444344 81444490 -38839822 - B1_Mus2 SINE Alu 0 147 2 7 1206 216 0 0 0 chr13 81444788 81444812 -38839500 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 1206 412 196 121 20 chr13 81445049 81445148 -38839164 + Lx8 LINE L1 6805 6913 -560 7 1206 270 361 8 0 chr13 81445235 81445354 -38838958 + Lx8 LINE L1 7105 7224 -249 7 1206 255 253 0 0 chr13 81445369 81445448 -38838864 + GA-rich Low_complexity Low_complexity 2 80 0 7 1206 819 238 20 78 chr13 81445672 81445927 -38838385 + Lx5 LINE L1 6811 7050 0 7 1206 527 306 6 18 chr13 81446047 81446210 -38838102 + RSINE1 SINE B4 3 163 -2 7 1206 221 333 0 0 chr13 81446322 81446391 -38837921 + (CA)n Simple_repeat Simple_repeat 2 70 0 7 1206 200 109 51 68 chr13 81446734 81446793 -38837519 + (TTTAA)n Simple_repeat Simple_repeat 3 60 0 7 1206 347 347 72 36 chr13 81446817 81447122 -38837190 + L1M5 LINE L1 2911 3226 -2920 7 1206 537 277 197 20 chr13 81447167 81447664 -38836648 + Lx8 LINE L1 6889 7473 0 7 1206 486 188 0 0 chr13 81448285 81448381 -38835931 + CT-rich Low_complexity Low_complexity 4 99 0 7 1206 264 213 0 0 chr13 81448462 81448523 -38835789 + CT-rich Low_complexity Low_complexity 2 62 0 7 1206 607 212 48 68 chr13 81448545 81448692 -38835620 - B1_Mur1 SINE Alu -1 148 5 7 1206 296 281 62 131 chr13 81448692 81448716 -38835596 - B4 SINE B4 -63 224 66 7 1206 438 69 0 0 chr13 81448720 81448778 -38835534 + (TC)n Simple_repeat Simple_repeat 2 59 0 7 1206 401 145 13 0 chr13 81448849 81448925 -38835387 + CT-rich Low_complexity Low_complexity 2 78 0 7 1206 614 184 62 56 chr13 81448951 81449095 -38835217 - B1_Mur1 SINE Alu 0 149 5 7 1206 324 265 67 109 chr13 81448954 81449119 -38835193 - B4 SINE B4 -69 223 66 7 1206 438 69 0 0 chr13 81449123 81449181 -38835131 + (TC)n Simple_repeat Simple_repeat 2 59 0 7 1206 401 145 13 0 chr13 81449252 81449328 -38834984 + CT-rich Low_complexity Low_complexity 2 78 0 7 1206 614 184 62 56 chr13 81449354 81449498 -38834814 - B1_Mur1 SINE Alu 0 149 5 7 1206 324 265 67 109 chr13 81449357 81449522 -38834790 - B4 SINE B4 -69 223 66 7 1206 270 0 0 0 chr13 81449526 81449556 -38834756 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 1206 853 272 32 36 chr13 81449572 81449850 -38834462 - B4A SINE B4 -11 281 5 7 1206 397 215 25 0 chr13 81449873 81449952 -38834360 - ID_B1 SINE B4 -1 223 143 7 1206 210 71 0 0 chr13 81450231 81450259 -38834053 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 1206 624 290 53 69 chr13 81450683 81450872 -38833440 - B3 SINE B2 -7 186 1 7 1206 244 331 103 30 chr13 81450978 81451143 -38833169 + MLT1B LTR MaLR 192 368 -22 7 1206 180 279 0 81 chr13 81452613 81452699 -38831613 - L3 LINE CR1 -4277 212 134 7 1206 328 306 102 24 chr13 81452744 81452871 -38831441 + L2a LINE L2 3032 3168 -258 7 1206 791 323 70 15 chr13 81453330 81453651 -38830661 + ORR1E LTR MaLR 7 359 0 7 1206 183 80 0 0 chr13 81453712 81453737 -38830575 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 7 1206 629 246 0 8 chr13 81456014 81456133 -38828179 - B3 SINE B2 -97 119 2 7 1206 204 326 39 87 chr13 81456550 81456654 -38827658 - L2c LINE L2 -7 3380 3282 7 1206 338 289 44 0 chr13 81456751 81456841 -38827471 - MER5A1 DNA MER1_type -54 112 19 7 1206 670 268 0 26 chr13 81456950 81457103 -38827209 + B1F SINE Alu 1 149 0 7 1206 339 164 0 0 chr13 81457103 81457164 -38827148 + A-rich Low_complexity Low_complexity 1 61 0 7 1206 22 0 0 0 chr13 81458974 81458996 -38825316 + AT_rich Low_complexity Low_complexity 1 22 0 7 1206 275 291 161 68 chr13 81459029 81459191 -38825121 + MLT1A0 LTR MaLR 119 295 -70 7 1206 388 307 29 0 chr13 81459214 81459351 -38824961 + Lx8 LINE L1 7176 7316 -157 7 1206 331 291 11 9 chr13 81459761 81459864 -38824448 + PB1D10 SINE Alu 25 128 -21 7 1206 399 41 0 0 chr13 81460531 81460580 -38823732 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1206 283 303 45 0 chr13 81460630 81460719 -38823593 - PB1D7 SINE Alu -8 112 20 7 1206 292 280 154 19 chr13 81462239 81462455 -38821857 + MIRc SINE MIR 24 256 -12 7 1206 801 204 7 0 chr13 81463520 81463667 -38820645 - B1_Mur4 SINE Alu -2 148 1 7 1206 210 133 0 43 chr13 81463752 81463799 -38820513 + (TTAA)n Simple_repeat Simple_repeat 4 48 0 7 1206 2383 151 7 5 chr13 81463922 81464334 -38819978 - Lx2 LINE L1 0 6997 6585 7 1206 21 57 0 0 chr13 81465225 81465260 -38819052 + AT_rich Low_complexity Low_complexity 1 35 0 7 1206 396 310 20 27 chr13 81465820 81465966 -38818346 - ID_B1 SINE B4 -2 222 78 7 1206 401 280 23 31 chr13 81466221 81466350 -38817962 + RSINE1 SINE B4 2 129 -36 7 1206 224 239 197 34 chr13 81467475 81467592 -38816720 + MIR SINE MIR 111 246 -16 7 1206 21 36 0 0 chr13 81468446 81468474 -38815838 + AT_rich Low_complexity Low_complexity 1 28 0 7 1206 1558 53 0 5 chr13 81468484 81468674 -38815638 + B2_Mm1a SINE B2 1 189 -4 7 1206 31 44 0 0 chr13 81468721 81468766 -38815546 + AT_rich Low_complexity Low_complexity 1 45 0 7 1206 540 30 0 0 chr13 81469510 81469576 -38814736 + (TG)n Simple_repeat Simple_repeat 2 67 0 7 1206 21 0 0 0 chr13 81469713 81469734 -38814578 + AT_rich Low_complexity Low_complexity 1 21 0 7 1206 608 345 97 45 chr13 81470098 81470626 -38813686 - Charlie7 DNA MER1_type -2057 555 1 7 1206 276 30 0 0 chr13 81471594 81471627 -38812685 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1206 291 54 0 0 chr13 81474557 81474594 -38809718 + (GA)n Simple_repeat Simple_repeat 1 37 0 7 1206 280 346 93 31 chr13 81474704 81474898 -38809414 + L2 LINE L2 2549 2754 -665 7 1206 2425 28 0 3 chr13 81475438 81475728 -38808584 + L1_Mus1 LINE L1 6279 6567 0 7 1206 404 311 48 48 chr13 81475950 81476136 -38808176 - B3A SINE B2 0 198 13 7 1206 26 0 0 0 chr13 81477501 81477527 -38806785 + AT_rich Low_complexity Low_complexity 1 26 0 7 1206 327 343 29 29 chr13 81477980 81478118 -38806194 + MLT1F1 LTR MaLR 429 566 -3 7 1206 653 119 22 29 chr13 81478353 81478491 -38805821 + (CATA)n Simple_repeat Simple_repeat 3 139 0 7 1206 568 301 73 17 chr13 81478945 81479178 -38805134 - Tigger5 DNA MER2_type -1 2405 2160 7 1206 445 301 103 6 chr13 81479171 81479345 -38804967 - Tigger5 DNA MER2_type -2156 250 60 7 1206 37 23 0 0 chr13 81479807 81479851 -38804461 + AT_rich Low_complexity Low_complexity 1 44 0 7 1206 469 180 70 45 chr13 81479897 81480054 -38804258 - Lx9 LINE L1 -67 7577 7417 7 1206 21 0 0 0 chr13 81480784 81480805 -38803507 + AT_rich Low_complexity Low_complexity 1 21 0 7 1206 248 299 0 0 chr13 81480848 81480915 -38803397 + L3 LINE CR1 3872 3938 -551 7 1206 254 270 116 62 chr13 81481099 81481160 -38803152 + ORR1B1-int LTR MaLR 920 988 -521 7 1206 511 325 13 7 chr13 81481160 81481315 -38802997 + B3A SINE B2 1 156 -42 8 1206 387 0 0 0 chr13 81481317 81481360 -38802952 + (CA)n Simple_repeat Simple_repeat 1 43 0 8 1206 192 97 0 0 chr13 81481904 81481935 -38802377 + (TTGG)n Simple_repeat Simple_repeat 1 31 0 8 1206 2304 155 113 16 chr13 81483079 81483493 -38800819 - RLTR31_Mm LTR ERVK 0 561 112 8 1206 374 0 22 0 chr13 81483493 81483539 -38800773 + (TC)n Simple_repeat Simple_repeat 2 48 0 8 1206 2304 155 113 16 chr13 81483539 81483635 -38800677 - RLTR31_Mm LTR ERVK -450 111 1 8 1206 305 117 17 0 chr13 81483768 81483828 -38800484 + (TG)n Simple_repeat Simple_repeat 2 62 0 8 1206 488 345 93 8 chr13 81483845 81484082 -38800230 + B4A SINE B4 1 257 -35 8 1206 228 200 0 39 chr13 81484123 81484201 -38800111 + (TA)n Simple_repeat Simple_repeat 2 76 0 8 1206 628 292 112 31 chr13 81484261 81484618 -38799694 + Lx8 LINE L1 5793 6178 -1295 8 1206 450 159 0 0 chr13 81484621 81484728 -38799584 + (CAGA)n Simple_repeat Simple_repeat 2 108 0 8 1206 1516 336 66 13 chr13 81484777 81485548 -38798764 + Lx8 LINE L1 6405 7216 -257 8 1206 398 308 89 46 chr13 81485553 81485856 -38798456 - L2 LINE L2 -834 2585 2270 8 1206 386 16 63 0 chr13 81486007 81486070 -38798242 + (CAAAAA)n Simple_repeat Simple_repeat 3 69 0 8 1206 1527 154 139 20 chr13 81488175 81488527 -38795785 + ORR1B1 LTR MaLR 1 394 0 8 1206 387 0 0 0 chr13 81489124 81489167 -38795145 + (TA)n Simple_repeat Simple_repeat 1 43 0 8 1206 26 64 0 0 chr13 81489716 81489763 -38794549 + AT_rich Low_complexity Low_complexity 1 47 0 8 1206 1209 203 84 32 chr13 81490023 81490369 -38793943 - Lx9 LINE L1 -7 7637 7274 8 1206 307 212 10 0 chr13 81492052 81492151 -38792161 - Lx9 LINE L1 -48 7596 7497 8 1206 1171 62 7 0 chr13 81492371 81492517 -38791795 + B1_Mus2 SINE Alu 1 147 0 8 1206 214 178 0 0 chr13 81492519 81492564 -38791748 + A-rich Low_complexity Low_complexity 1 45 0 8 1206 252 0 0 0 chr13 81495091 81495119 -38789193 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 8 1206 190 335 131 31 chr13 81495404 81495564 -38788748 - L2 LINE L2 -458 2961 2786 8 1206 465 317 99 0 chr13 81495605 81495747 -38788565 + B4A SINE B4 42 197 -95 8 1206 425 181 11 0 chr13 81495747 81495841 -38788471 + CT-rich Low_complexity Low_complexity 6 100 0 8 1206 288 0 0 0 chr13 81495841 81495873 -38788439 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1206 351 0 0 0 chr13 81496903 81496942 -38787370 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1206 378 282 55 0 chr13 81498443 81498553 -38785759 - PB1D9 SINE Alu 0 120 5 8 1206 181 283 22 0 chr13 81499372 81499418 -38784894 + MIR SINE MIR 117 163 -99 8 1206 856 249 43 39 chr13 81500045 81500300 -38784012 + RLTR11A2 LTR ERVK 5 260 -267 1 1206 644 323 20 28 chr13 81500314 81500671 -38783641 + L1VL4 LINE L1 238 591 -5711 2 1206 24979 131 11 20 chr13 81500657 81501249 -38783063 + L1_Mus2 LINE L1 1478 2070 -3813 3 1206 192 77 0 0 chr13 81501249 81501275 -38783037 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1206 24979 131 11 20 chr13 81501275 81502664 -38781648 + L1_Mus2 LINE L1 2071 3482 -2401 3 1206 836 136 35 7 chr13 81502664 81502805 -38781507 + B1_Mus1 SINE Alu 2 146 -2 5 1206 24979 111 10 14 chr13 81502805 81505942 -38778370 + L1_Mus2 LINE L1 3483 6566 0 3 1206 285 382 96 30 chr13 81506279 81506549 -38777763 + B4 SINE B4 5 292 0 6 1206 306 0 0 0 chr13 81506577 81506611 -38777701 + (CA)n Simple_repeat Simple_repeat 1 34 0 7 1206 22 70 0 0 chr13 81506692 81506735 -38777577 + AT_rich Low_complexity Low_complexity 1 43 0 8 1206 296 230 30 0 chr13 81507243 81507408 -38776904 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 9 1206 21 0 0 0 chr13 81508954 81508975 -38775337 + AT_rich Low_complexity Low_complexity 1 21 0 1 1206 328 206 31 16 chr13 81509100 81509164 -38775148 + ID4_ SINE ID 8 72 -11 1 1206 550 256 23 0 chr13 81509329 81509458 -38774854 + ID_B1 SINE B4 81 212 -12 1 1206 201 262 0 0 chr13 81509464 81509525 -38774787 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1206 306 0 0 0 chr13 81509649 81509683 -38774629 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 1206 449 288 43 7 chr13 81509912 81510052 -38774260 + B3A SINE B2 1 145 -53 1 1206 1474 218 22 47 chr13 81510114 81510518 -38773794 - Lx6 LINE L1 -9 7451 7058 1 1206 936 239 115 60 chr13 81511420 81511768 -38772544 + Lx7 LINE L1 6664 7030 -666 1 1206 878 236 24 8 chr13 81511824 81512076 -38772236 + Lx7 LINE L1 7174 7429 -267 1 1206 243 200 107 84 chr13 81512136 81512267 -38772045 + Lx7 LINE L1 7559 7692 -4 1 1206 339 368 6 89 chr13 81512289 81512468 -38771844 + RSINE1 SINE B4 2 165 0 1 1206 550 162 15 0 chr13 81512468 81512604 -38771708 + (CA)n Simple_repeat Simple_repeat 1 138 0 1 1206 416 181 583 5 chr13 81512604 81512794 -38771518 + Lx9 LINE L1 7341 7640 -4 2 1206 1170 30 0 0 chr13 81512941 81513076 -38771236 + B1_Mus2 SINE Alu 1 135 -12 2 1206 345 24 0 0 chr13 81513076 81513118 -38771194 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 2 1206 331 276 21 0 chr13 81513944 81514029 -38770283 - PB1D10 SINE Alu -26 91 5 2 1206 1276 254 82 37 chr13 81515145 81515331 -38768981 + MTD LTR MaLR 1 189 -230 2 1206 2439 50 10 0 chr13 81515331 81515633 -38768679 + L1_Mus1 LINE L1 6263 6567 0 2 1206 1276 254 82 37 chr13 81515633 81515847 -38768465 + MTD LTR MaLR 190 419 0 2 1206 21 36 0 0 chr13 81516706 81516734 -38767578 + AT_rich Low_complexity Low_complexity 1 28 0 2 1206 243 0 0 0 chr13 81518951 81518978 -38765334 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1206 296 357 31 0 chr13 81520468 81520566 -38763746 - MIR SINE MIR -158 104 4 2 1206 1995 222 8 12 chr13 81521836 81522237 -38762075 - MTB_Mm LTR MaLR -8 399 1 2 1206 1515 174 14 185 chr13 81522262 81522684 -38761628 + ORR1D1 LTR MaLR 25 374 0 3 1206 6545 73 25 3 chr13 81522875 81523749 -38760563 + L1_Mus3 LINE L1 5742 6634 -4 3 1206 243 308 75 28 chr13 81523860 81523967 -38760345 - Tigger5 DNA MER2_type -4 2402 2291 3 1206 482 290 96 27 chr13 81523990 81524178 -38760134 - Tigger5 DNA MER2_type -2200 206 6 3 1206 270 0 0 0 chr13 81525333 81525363 -38758949 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1206 198 0 0 0 chr13 81525507 81525529 -38758783 + (TAAAA)n Simple_repeat Simple_repeat 1 22 0 3 1206 1199 62 0 0 chr13 81525537 81525683 -38758629 - B1_Mus1 SINE Alu -1 147 2 3 1207 23 86 0 0 chr13 81526915 81526973 -38757339 + AT_rich Low_complexity Low_complexity 1 58 0 3 1207 247 61 61 0 chr13 81527198 81527247 -38757065 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 3 1207 748 99 0 37 chr13 81527397 81527533 -38756779 + L1Md_F2 LINE L1 6451 6581 -1 3 1207 7195 75 2 1 chr13 81527549 81528665 -38755647 - L1Md_F2 LINE L1 0 6582 5465 3 1207 252 0 0 0 chr13 81528815 81528843 -38755469 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 1207 261 0 0 0 chr13 81528843 81528871 -38755441 + (TA)n Simple_repeat Simple_repeat 2 30 0 4 1207 435 119 0 0 chr13 81528907 81528974 -38755338 + (CA)n Simple_repeat Simple_repeat 1 67 0 4 1207 940 95 51 0 chr13 81530907 81531044 -38753268 - RMER6C LTR ERVK 0 690 547 4 1207 1592 151 0 15 chr13 81531063 81531332 -38752980 - RMER6C LTR ERVK -425 265 1 4 1207 21 107 0 0 chr13 81531437 81531521 -38752791 + AT_rich Low_complexity Low_complexity 1 84 0 4 1207 199 171 0 68 chr13 81532558 81532602 -38751710 - L4 LINE RTE -301 1728 1688 4 1207 236 344 68 15 chr13 81532786 81532919 -38751393 - MIR SINE MIR -68 194 55 4 1207 326 300 35 21 chr13 81533865 81534008 -38750304 - MER53 DNA hAT -36 157 13 4 1207 240 294 18 73 chr13 81534808 81534918 -38749394 - PB1D9 SINE Alu -4 116 13 4 1207 1177 194 5 0 chr13 81534937 81535123 -38749189 - B3 SINE B2 -29 187 1 4 1207 356 258 0 0 chr13 81535491 81535557 -38748755 - B3 SINE B2 -15 201 136 5 1207 243 296 43 61 chr13 81537387 81537502 -38746810 - L2b LINE L2 -297 3078 2966 5 1207 1142 205 186 45 chr13 81537676 81538075 -38746237 + RMER6B LTR ERVK 1 455 -6 5 1207 1393 270 17 32 chr13 81538923 81539197 -38745115 - Lx6 LINE L1 -67 7393 7123 5 1207 1845 134 21 50 chr13 81539197 81539534 -38744778 + ORR1A2 LTR MaLR 1 327 0 5 1207 1393 270 17 32 chr13 81539534 81539665 -38744647 - Lx6 LINE L1 -338 7122 6994 5 1207 743 216 144 11 chr13 81539913 81540344 -38743968 - L1MD2 LINE L1 -395 5964 5460 5 1207 691 287 54 22 chr13 81540709 81541103 -38743209 + MTE2b LTR MaLR 8 359 -20 5 1207 482 304 131 23 chr13 81541245 81541760 -38742552 - L1MDa LINE L1 -5052 1581 1028 5 1207 213 39 0 0 chr13 81541760 81541786 -38742526 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1207 482 304 131 23 chr13 81541786 81541926 -38742386 - L1MDa LINE L1 -5606 1027 855 5 1207 210 118 0 0 chr13 81542119 81542153 -38742159 + (TC)n Simple_repeat Simple_repeat 1 34 0 5 1207 302 362 39 26 chr13 81542176 81542329 -38741983 - L1MDa LINE L1 -6193 440 286 5 1207 378 267 126 19 chr13 81542545 81542759 -38741553 - L1MDa LINE L1 -6390 243 7 5 1207 243 220 17 0 chr13 81544501 81544560 -38739752 + (TA)n Simple_repeat Simple_repeat 1 60 0 6 1207 330 91 0 0 chr13 81544797 81544852 -38739460 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 6 1207 1739 173 70 32 chr13 81544927 81545297 -38739015 + ORR1C2 LTR MaLR 1 384 0 6 1207 785 256 16 112 chr13 81545715 81545787 -38738525 - ID_B1 SINE B4 -4 220 150 6 1207 3245 52 17 0 chr13 81545787 81546192 -38738120 + L1_Mus1 LINE L1 6156 6567 0 6 1207 785 256 16 112 chr13 81546192 81546361 -38737951 - ID_B1 SINE B4 -75 149 2 6 1207 375 41 0 0 chr13 81547625 81547674 -38736638 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 1207 815 289 55 116 chr13 81547674 81548053 -38736259 - MTE2a LTR MaLR -15 364 9 6 1207 201 308 0 0 chr13 81548345 81548397 -38735915 + (TG)n Simple_repeat Simple_repeat 2 53 0 6 1207 255 364 107 10 chr13 81548514 81548711 -38735601 - MIRb SINE MIR -36 232 17 6 1207 327 288 48 9 chr13 81549020 81549125 -38735187 - PB1D10 SINE Alu -8 109 1 6 1207 228 97 0 0 chr13 81549291 81549322 -38734990 - URR1B DNA MER1_type 0 225 195 7 1207 2534 206 29 2 chr13 81549324 81549848 -38734464 + Lx7 LINE L1 6175 6712 -984 7 1207 2580 216 97 71 chr13 81549849 81550650 -38733662 + Lx7 LINE L1 6873 7694 -2 7 1207 344 336 40 16 chr13 81553187 81553311 -38731001 + RSINE1 SINE B4 4 130 -35 7 1207 531 112 0 0 chr13 81553492 81553572 -38730740 + (CA)n Simple_repeat Simple_repeat 2 81 0 7 1207 663 236 112 10 chr13 81554307 81554504 -38729808 - Lx6 LINE L1 -11 7449 7233 7 1207 243 304 164 23 chr13 81554565 81554693 -38729619 + L2a LINE L2 3280 3425 -1 7 1207 573 196 18 0 chr13 81554834 81554851 -38729461 + (CA)n Simple_repeat Simple_repeat 2 18 0 7 1207 384 22 0 0 chr13 81554851 81554896 -38729416 + (CCA)n Simple_repeat Simple_repeat 3 47 0 7 1207 573 196 18 0 chr13 81554896 81555046 -38729266 + (CA)n Simple_repeat Simple_repeat 1 153 0 7 1207 340 209 43 25 chr13 81555012 81555174 -38729138 + (CATATA)n Simple_repeat Simple_repeat 6 170 0 7 1207 444 283 78 5 chr13 81556453 81556645 -38727667 + L1MA7 LINE L1 6061 6266 -25 8 1207 1193 38 0 0 chr13 81556672 81556805 -38727507 + B1_Mus1 SINE Alu 4 136 -12 8 1207 522 0 0 0 chr13 81556809 81556867 -38727445 + (TAAA)n Simple_repeat Simple_repeat 3 60 0 8 1207 221 140 0 23 chr13 81557173 81557217 -38727095 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 8 1207 425 50 0 16 chr13 81557245 81557306 -38727006 + (TG)n Simple_repeat Simple_repeat 2 61 0 8 1207 357 24 0 0 chr13 81557662 81557704 -38726608 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 8 1207 783 213 14 7 chr13 81557741 81557883 -38726429 - B1_Mur2 SINE Alu -2 147 5 8 1207 36 0 0 0 chr13 81559649 81559685 -38724627 + AT_rich Low_complexity Low_complexity 1 36 0 8 1207 1149 221 171 0 chr13 81559877 81560193 -38724119 + MTD LTR MaLR 46 415 -4 8 1207 1330 165 9 13 chr13 81560870 81561097 -38723215 - URR1B DNA MER1_type 0 225 1 7 1207 1035 226 25 0 chr13 81561320 81561524 -38722788 - B3 SINE B2 -5 211 3 8 1207 214 143 41 0 chr13 81561704 81561753 -38722559 + CT-rich Low_complexity Low_complexity 1 51 0 9 1207 32 26 0 0 chr13 81562034 81562073 -38722239 + AT_rich Low_complexity Low_complexity 1 39 0 9 1207 556 296 0 7 chr13 81563741 81563884 -38720428 - ID_B1 SINE B4 -3 221 80 9 1207 330 87 0 0 chr13 81564446 81564492 -38719820 + (T)n Simple_repeat Simple_repeat 1 46 0 9 1207 512 194 84 53 chr13 81564492 81564623 -38719689 - B1_Mur1 SINE Alu 0 149 15 9 1207 25 31 0 0 chr13 81565626 81565658 -38718654 + AT_rich Low_complexity Low_complexity 1 32 0 9 1207 1360 217 81 122 chr13 81565658 81565842 -38718470 + RMER1C Other Other 821 999 -343 9 1207 216 0 0 0 chr13 81565842 81565866 -38718446 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 9 1207 1360 217 81 122 chr13 81565866 81565916 -38718396 + RMER1C Other Other 1000 1045 -297 9 1207 1856 132 61 0 chr13 81565916 81566212 -38718100 + Lx4A LINE L1 6744 7057 -1 9 1207 1360 217 81 122 chr13 81566212 81566484 -38717828 + RMER1C Other Other 1046 1307 -35 9 1207 189 0 0 0 chr13 81566486 81566507 -38717805 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 9 1207 1007 189 85 15 chr13 81567431 81567630 -38716682 + B3 SINE B2 3 215 -1 1 1207 7915 68 26 4 chr13 81567717 81568790 -38715522 + L1_Mus3 LINE L1 5542 6638 0 1 1207 1358 280 169 9 chr13 81569153 81569610 -38714702 - Lx8 LINE L1 0 7473 6944 1 1207 1844 159 126 11 chr13 81569610 81569992 -38714320 + RMER15 LTR ERVL 1 426 -149 1 1207 552 210 8 0 chr13 81571403 81571509 -38712803 - B1_Mur1 SINE Alu -5 145 33 1 1207 576 273 30 22 chr13 81571535 81571670 -38712642 - RSINE1 SINE B4 -22 143 8 1 1207 2218 114 65 0 chr13 81571901 81572208 -38712104 + ORR1A2 LTR MaLR 1 327 0 1 1207 584 318 31 18 chr13 81573251 81573561 -38710751 + Lx8 LINE L1 5558 5903 -1570 1 1207 249 247 25 25 chr13 81575083 81575162 -38709150 - ID2 SINE ID -4 79 1 1 1207 560 318 15 0 chr13 81575162 81575357 -38708955 + MLT2C2 LTR ERVL 1 198 -266 1 1207 477 50 0 0 chr13 81575479 81575539 -38708773 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1207 291 203 0 0 chr13 81575598 81575667 -38708645 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1207 699 245 101 15 chr13 81576116 81576315 -38707997 - ID_B1 SINE B4 -8 216 1 1 1207 28 29 0 0 chr13 81576835 81576870 -38707442 + AT_rich Low_complexity Low_complexity 1 35 0 1 1207 322 257 261 7 chr13 81577579 81577732 -38706580 - B2_Mm2 SINE B2 -3 192 1 1 1207 192 97 0 0 chr13 81579625 81579656 -38704656 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1207 573 268 39 7 chr13 81579659 81579813 -38704499 - RSINE1 SINE B4 -2 163 5 1 1207 22 56 0 0 chr13 81579909 81579945 -38704367 + AT_rich Low_complexity Low_complexity 1 36 0 1 1207 487 206 98 163 chr13 81580493 81580647 -38703665 - B3A SINE B2 0 198 38 1 1207 1447 219 47 116 chr13 81580647 81581097 -38703215 + MTD LTR MaLR 1 419 0 1 1207 487 257 128 22 chr13 81581097 81581145 -38703167 - B3A SINE B2 -137 61 2 1 1207 400 20 0 0 chr13 81581195 81581246 -38703066 - L1Md_F3 LINE L1 -14 6570 6520 1 1207 240 269 0 0 chr13 81583299 81583351 -38700961 + CT-rich Low_complexity Low_complexity 5 56 0 1 1207 303 203 0 0 chr13 81584112 81584181 -38700131 + (CA)n Simple_repeat Simple_repeat 2 70 0 1 1207 1072 141 124 15 chr13 81585140 81585341 -38698971 - URR1A DNA MER1_type -3 223 1 1 1207 555 199 31 0 chr13 81585821 81585982 -38698330 + CT-rich Low_complexity Low_complexity 2 167 0 1 1207 403 189 123 23 chr13 81586205 81586335 -38697977 - Lx5 LINE L1 0 7050 6908 1 1207 22 0 0 0 chr13 81586400 81586422 -38697890 + AT_rich Low_complexity Low_complexity 1 22 0 1 1207 1102 78 35 0 chr13 81586789 81586931 -38697381 + B1_Mus1 SINE Alu 2 148 0 1 1207 180 0 0 0 chr13 81586931 81586951 -38697361 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1207 683 262 16 27 chr13 81586956 81587140 -38697172 + B3A SINE B2 2 183 -15 1 1207 384 297 106 21 chr13 81587208 81587397 -38696915 + B3A SINE B2 2 206 -10 1 1207 42 20 0 0 chr13 81587403 81587452 -38696860 + AT_rich Low_complexity Low_complexity 1 49 0 1 1207 28 91 0 0 chr13 81587616 81587693 -38696619 + AT_rich Low_complexity Low_complexity 1 77 0 1 1207 277 275 90 18 chr13 81589313 81589424 -38694888 + MER82 DNA MER2_type 384 502 -151 1 1207 942 110 121 58 chr13 81591078 81591251 -38693061 + B2_Mm2 SINE B2 3 186 -9 1 1207 36170 45 1 3 chr13 81591910 81597147 -38687165 + L1Md_T LINE L1 271 5589 -297 1 1207 9010 32 0 1 chr13 81597147 81598144 -38686168 + L1Md_T LINE L1 5590 6585 0 1 1207 886 87 0 53 chr13 81598887 81599020 -38685292 + L1_Mus1 LINE L1 6442 6567 0 1 1207 414 292 92 61 chr13 81599229 81599393 -38684919 - B4 SINE B4 -3 289 121 1 1207 972 214 16 184 chr13 81599452 81599820 -38684492 + ORR1D1 LTR MaLR 24 334 -50 1 1207 256 292 40 40 chr13 81599828 81599903 -38684409 - B4 SINE B4 -169 123 49 1 1207 219 103 0 0 chr13 81600124 81600163 -38684149 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 1 1207 4404 94 36 9 chr13 81600266 81600955 -38683357 + MusHAL1 LINE L1 235 942 -1770 1 1207 329 281 0 0 chr13 81601081 81601170 -38683142 - PB1D10 SINE Alu -2 115 27 1 1207 35 24 0 0 chr13 81602057 81602099 -38682213 + AT_rich Low_complexity Low_complexity 1 42 0 1 1207 228 241 72 0 chr13 81602189 81602272 -38682040 + L1M2 LINE L1 2745 2833 -3310 1 1207 8172 99 3 4 chr13 81602633 81604256 -38680056 - L1_Mus3 LINE L1 -317 6321 4701 1 1207 466 263 122 28 chr13 81605753 81605933 -38678379 + B3A SINE B2 2 198 0 1 1207 1210 68 7 0 chr13 81606025 81606171 -38678141 + B1_Mm SINE Alu 1 147 0 1 1207 255 93 0 0 chr13 81606171 81606214 -38678098 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1207 22 56 0 0 chr13 81606281 81606317 -38677995 + AT_rich Low_complexity Low_complexity 1 36 0 1 1207 1672 43 0 0 chr13 81606364 81606550 -38677762 + B2_Mm1a SINE B2 1 186 -7 1 1207 760 266 146 4 chr13 81607220 81607473 -38676839 + B4A SINE B4 4 292 0 1 1207 391 167 0 22 chr13 81607473 81607565 -38676747 + (CA)n Simple_repeat Simple_repeat 1 90 0 1 1207 714 306 59 64 chr13 81607881 81608321 -38675991 + L1_Rod LINE L1 5359 5796 -51 1 1207 1172 56 0 43 chr13 81608367 81608553 -38675759 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 1 1207 680 85 0 68 chr13 81608553 81608794 -38675518 + GA-rich Low_complexity Low_complexity 1 224 0 1 1207 2741 302 86 28 chr13 81608948 81610148 -38674164 + Lx8 LINE L1 6040 7308 -165 1 1207 1274 104 46 0 chr13 81610486 81610659 -38673653 + B2_Mm2 SINE B2 1 181 -14 1 1207 1697 224 45 14 chr13 81610676 81611097 -38673215 + Lx7 LINE L1 6981 7414 -282 1 1207 234 304 39 10 chr13 81612094 81612197 -38672115 - PB1 SINE Alu -17 110 5 1 1207 281 295 13 0 chr13 81613289 81613367 -38670945 - ID4 SINE ID -3 80 2 1 1207 25 51 0 0 chr13 81614611 81614650 -38669662 + AT_rich Low_complexity Low_complexity 1 39 0 1 1207 30 0 0 0 chr13 81615323 81615353 -38668959 + AT_rich Low_complexity Low_complexity 1 30 0 1 1207 371 305 160 30 chr13 81616449 81616618 -38667694 - RMER1A Other Other -652 378 188 1 1207 3516 193 54 1 chr13 81616612 81617415 -38666897 + RMER1B Other Other 134 1053 -13 1 1207 263 324 40 0 chr13 81619622 81619696 -38664616 + RMER30 DNA MER1_type 1 77 -125 1 1207 39 22 0 0 chr13 81619976 81620022 -38664290 + AT_rich Low_complexity Low_complexity 1 46 0 1 1207 1159 49 7 0 chr13 81621237 81621381 -38662931 - B1_Mm SINE Alu 0 147 3 1 1207 302 288 166 50 chr13 81621741 81621880 -38662432 - RSINE1 SINE B4 0 165 11 1 1207 258 219 14 0 chr13 81622644 81622717 -38661595 + CT-rich Low_complexity Low_complexity 1 74 0 1 1207 211 381 17 51 chr13 81622787 81622964 -38661348 + L2b LINE L2 2920 3090 -285 1 1207 262 265 0 42 chr13 81623107 81623178 -38661134 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1207 279 133 0 0 chr13 81623319 81623364 -38660948 + (A)n Simple_repeat Simple_repeat 1 45 0 1 1207 21 71 0 0 chr13 81623480 81623522 -38660790 + AT_rich Low_complexity Low_complexity 1 42 0 1 1207 27 29 0 0 chr13 81623718 81623752 -38660560 + AT_rich Low_complexity Low_complexity 1 34 0 1 1207 247 299 23 11 chr13 81625035 81625123 -38659189 - MER46C DNA MER2_type 0 338 250 1 1207 810 193 0 0 chr13 81625172 81625312 -38659000 + B1_Mur4 SINE Alu 11 150 0 1 1207 469 261 56 73 chr13 81626073 81626251 -38658061 + B4A SINE B4 1 175 -117 1 1207 423 314 27 54 chr13 81626244 81626309 -38658003 + MTD LTR MaLR 147 214 -165 1 1207 507 60 0 0 chr13 81626309 81626376 -38657936 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 1207 776 219 16 8 chr13 81626376 81626549 -38657763 + MTD LTR MaLR 215 419 0 1 1207 343 272 18 55 chr13 81626549 81626655 -38657657 + B3 SINE B2 114 215 -1 1 1207 282 95 0 0 chr13 81627188 81627230 -38657082 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1207 653 240 62 21 chr13 81627267 81627458 -38656854 + B3 SINE B2 3 195 0 1 1207 738 95 24 0 chr13 81628335 81628461 -38655851 + (TC)n Simple_repeat Simple_repeat 2 130 0 1 1207 387 0 0 0 chr13 81630010 81630053 -38654259 + (GA)n Simple_repeat Simple_repeat 2 44 0 1 1207 213 132 0 0 chr13 81630071 81630109 -38654203 + (GGGGA)n Simple_repeat Simple_repeat 4 41 0 1 1207 534 305 87 24 chr13 81630260 81630586 -38653726 - MTE2b LTR MaLR -1 369 6 1 1207 405 0 0 0 chr13 81630610 81630655 -38653657 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1207 21 0 0 0 chr13 81632274 81632295 -38652017 + AT_rich Low_complexity Low_complexity 1 21 0 1 1207 498 149 0 0 chr13 81632396 81632483 -38651829 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1207 194 325 108 31 chr13 81632540 81632670 -38651642 + L2 LINE L2 2470 2609 -810 1 1207 369 0 0 0 chr13 81633121 81633162 -38651150 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1207 700 244 70 75 chr13 81633162 81633338 -38650974 - B3 SINE B2 -18 177 2 1 1207 4704 125 86 20 chr13 81633983 81634502 -38649810 - RMER17A2 LTR ERVK 0 906 373 1 1207 996 75 0 0 chr13 81634502 81634636 -38649676 + (GGAGA)n Simple_repeat Simple_repeat 3 136 0 1 1207 4704 125 86 20 chr13 81634636 81634966 -38649346 - RMER17A2 LTR ERVK -534 372 1 1 1207 25 31 0 0 chr13 81635046 81635078 -38649234 + AT_rich Low_complexity Low_complexity 1 32 0 1 1207 574 322 6 11 chr13 81635618 81635800 -38648512 + B3A SINE B2 1 181 -17 1 1207 1017 122 7 7 chr13 81635849 81635997 -38648315 - B1_Mus1 SINE Alu 0 148 1 1 1207 714 163 108 136 chr13 81637029 81637242 -38647070 + B3 SINE B2 2 208 -8 1 1207 924 158 21 37 chr13 81637521 81637711 -38646601 - B2_Mm2 SINE B2 -8 187 1 1 1207 530 224 163 31 chr13 81638502 81638631 -38645681 - RSINE1 SINE B4 -17 148 3 1 1207 1129 64 0 0 chr13 81638735 81638875 -38645437 - B1_Mus2 SINE Alu -6 141 2 2 1207 261 234 0 0 chr13 81639033 81639097 -38645215 + CT-rich Low_complexity Low_complexity 2 65 0 2 1207 291 288 121 56 chr13 81639132 81639376 -38644936 + MTD LTR MaLR 94 407 0 2 1207 32 81 0 0 chr13 81639604 81639678 -38644634 + AT_rich Low_complexity Low_complexity 1 74 0 2 1207 1620 144 8 112 chr13 81640554 81640847 -38643465 + ORR1A4 LTR MaLR 1 268 -61 2 1207 1190 74 0 0 chr13 81640847 81640995 -38643317 + B1_Mus1 SINE Alu 1 148 0 2 1207 1620 144 8 112 chr13 81640995 81641068 -38643244 + ORR1A4 LTR MaLR 269 329 0 2 1207 302 282 81 9 chr13 81642258 81642369 -38641943 + B3A SINE B2 3 121 -77 2 1207 639 26 0 0 chr13 81643954 81644031 -38640281 + (TG)n Simple_repeat Simple_repeat 2 78 0 2 1207 494 164 43 0 chr13 81644039 81644155 -38640157 + Lx9 LINE L1 7517 7637 -7 2 1207 458 108 0 13 chr13 81645846 81645921 -38638391 + (TG)n Simple_repeat Simple_repeat 2 75 0 2 1207 464 169 11 43 chr13 81646284 81646470 -38637842 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1207 181 196 0 35 chr13 81646526 81646584 -38637728 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1207 424 253 54 35 chr13 81648949 81649077 -38635235 + B1F SINE Alu 13 143 -6 2 1207 522 0 0 0 chr13 81649154 81649212 -38635100 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1207 296 316 110 19 chr13 81649299 81649454 -38634858 - B4A SINE B4 -122 170 2 2 1207 327 298 123 8 chr13 81649596 81649718 -38634594 - B1F1 SINE Alu -13 136 1 2 1207 204 135 0 0 chr13 81651709 81651746 -38632566 + (T)n Simple_repeat Simple_repeat 1 37 0 2 1207 21 36 0 0 chr13 81651856 81651884 -38632428 + AT_rich Low_complexity Low_complexity 1 28 0 2 1207 432 0 0 0 chr13 81653506 81653554 -38630758 + (TTTTA)n Simple_repeat Simple_repeat 2 49 0 2 1207 661 239 8 0 chr13 81654370 81654500 -38629812 + B1_Mur3 SINE Alu 1 131 -18 2 1207 536 0 16 0 chr13 81654500 81654564 -38629748 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 1207 1071 309 108 20 chr13 81654591 81655183 -38629129 - Lx8 LINE L1 -153 7320 6677 2 1207 189 0 0 0 chr13 81657721 81657742 -38626570 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 1208 600 340 37 9 chr13 81658338 81658552 -38625760 - ID_B1 SINE B4 -1 223 4 2 1208 270 0 0 0 chr13 81660637 81660667 -38623645 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 2 1208 209 159 57 74 chr13 81661541 81661663 -38622649 + (TTAAA)n Simple_repeat Simple_repeat 1 120 0 2 1208 25 51 0 0 chr13 81662001 81662040 -38622272 + AT_rich Low_complexity Low_complexity 1 39 0 2 1208 291 122 0 0 chr13 81662253 81662302 -38622010 + (CATA)n Simple_repeat Simple_repeat 4 52 0 2 1208 241 64 20 41 chr13 81663415 81663464 -38620848 + (CAAAAA)n Simple_repeat Simple_repeat 1 48 0 2 1208 485 255 80 16 chr13 81665023 81665210 -38619102 - L1MA5 LINE L1 -285 6015 5817 2 1208 1963 164 84 8 chr13 81665273 81665654 -38618658 - MTC LTR MaLR 0 421 12 2 1208 234 194 48 0 chr13 81665657 81665719 -38618593 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1208 21 71 0 0 chr13 81666254 81666296 -38618016 + AT_rich Low_complexity Low_complexity 1 42 0 2 1208 801 245 0 45 chr13 81667112 81667313 -38616999 + B3A SINE B2 1 192 -6 2 1208 258 105 0 0 chr13 81668326 81668364 -38615948 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1208 441 0 0 0 chr13 81668904 81668953 -38615359 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1208 420 304 21 21 chr13 81669239 81669380 -38614932 - RSINE1 SINE B4 -23 142 2 2 1208 1163 84 9 20 chr13 81669949 81670304 -38614008 + (GGGAA)n Simple_repeat Simple_repeat 1 350 0 2 1208 655 0 0 116 chr13 81670315 81670513 -38613799 + (GAGAA)n Simple_repeat Simple_repeat 4 178 0 2 1208 4291 74 3 12 chr13 81672539 81673115 -38611197 - L1_Mus3 LINE L1 -1 6637 6067 2 1208 334 260 84 28 chr13 81674152 81674259 -38610053 - PB1D9 SINE Alu -6 114 2 2 1208 21 0 0 0 chr13 81674625 81674646 -38609666 + AT_rich Low_complexity Low_complexity 1 21 0 2 1208 275 296 102 48 chr13 81674854 81675021 -38609291 - MER46C DNA MER2_type -129 209 34 2 1208 946 203 21 21 chr13 81676133 81676324 -38607988 + B3 SINE B2 17 207 -9 2 1208 485 80 0 14 chr13 81677641 81677718 -38606594 + L1_Mm LINE L1 5551 5651 -520 2 1208 543 98 16 31 chr13 81677720 81677847 -38606465 + (TA)n Simple_repeat Simple_repeat 2 126 0 2 1208 5951 57 3 0 chr13 81677847 81678624 -38605688 + L1Md_F2 LINE L1 5615 6393 -189 2 1208 879 191 138 0 chr13 81678741 81678930 -38605382 + B3 SINE B2 2 216 0 2 1208 1411 218 83 0 chr13 81679362 81679497 -38604815 - Lx9 LINE L1 -1 7643 7478 2 1208 333 0 0 0 chr13 81679497 81679534 -38604778 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1208 1411 218 83 0 chr13 81679534 81679793 -38604519 - Lx9 LINE L1 -167 7477 7217 2 1208 226 250 0 0 chr13 81679790 81679842 -38604470 + Lx9 LINE L1 7161 7212 -432 2 1208 2120 218 51 4 chr13 81679881 81680407 -38603905 + Lx9 LINE L1 6659 7209 -435 2 1208 23 54 0 0 chr13 81680716 81680753 -38603559 + AT_rich Low_complexity Low_complexity 1 37 0 2 1208 2465 142 13 5 chr13 81680866 81681254 -38603058 + ORR1B1 LTR MaLR 4 394 0 2 1208 29 0 0 0 chr13 81681351 81681380 -38602932 + AT_rich Low_complexity Low_complexity 1 29 0 2 1208 3341 79 5 0 chr13 81681387 81681831 -38602481 + L1_Mus1 LINE L1 6121 6566 -1 2 1208 1010 101 0 0 chr13 81681967 81682106 -38602206 + B1_Mm SINE Alu 1 139 -8 2 1208 243 0 0 0 chr13 81682106 81682133 -38602179 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1208 1024 103 0 12 chr13 81682171 81682338 -38601974 + (GAGAA)n Simple_repeat Simple_repeat 4 168 0 2 1208 759 341 45 12 chr13 81682749 81683084 -38601228 + MLT1A0 LTR MaLR 10 355 -10 2 1208 413 286 0 0 chr13 81683088 81683172 -38601140 + PB1D10 SINE Alu 6 89 -28 2 1208 381 258 0 93 chr13 81684176 81684283 -38600029 + PB1D10 SINE Alu 21 117 0 2 1208 198 0 0 0 chr13 81684298 81684320 -38599992 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2 1208 585 160 0 0 chr13 81684435 81684541 -38599771 + (TA)n Simple_repeat Simple_repeat 2 107 0 2 1208 3258 77 4 4 chr13 81685965 81686422 -38597890 - L1Md_F2 LINE L1 -474 6108 5652 2 1208 3237 95 41 4 chr13 81686422 81686888 -38597424 + L1_Mus1 LINE L1 6085 6567 0 2 1208 1144 82 0 0 chr13 81686932 81687078 -38597234 + B1_Mm SINE Alu 2 147 0 2 1208 408 118 0 0 chr13 81687101 81687169 -38597143 + (GA)n Simple_repeat Simple_repeat 2 69 0 2 1208 1290 212 47 42 chr13 81687569 81687929 -38596383 + Lx7 LINE L1 7132 7493 -203 2 1208 551 373 85 5 chr13 81688191 81688590 -38595722 + Tigger9b DNA MER2_type 194 624 0 2 1208 495 0 0 0 chr13 81689312 81689367 -38594945 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 1208 198 47 0 85 chr13 81689371 81689418 -38594894 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2 1208 21 71 0 0 chr13 81689496 81689538 -38594774 + AT_rich Low_complexity Low_complexity 1 42 0 2 1208 1035 118 0 0 chr13 81689685 81689829 -38594483 - B1_Mus1 SINE Alu 0 148 5 2 1208 5436 74 19 2 chr13 81689894 81691001 -38593311 - L1_Mus1 LINE L1 -236 6331 5207 2 1208 5058 102 13 3 chr13 81690995 81691768 -38592544 + L1_Mus1 LINE L1 4433 5213 -670 2 1208 3685 137 50 5 chr13 81692131 81692756 -38591556 + Lx3C LINE L1 6317 6969 -7 2 1208 26 30 0 0 chr13 81692758 81692791 -38591521 + AT_rich Low_complexity Low_complexity 1 33 0 2 1208 186 43 0 0 chr13 81692864 81692887 -38591425 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 2 1208 203 169 16 33 chr13 81693461 81693522 -38590790 + (TATAA)n Simple_repeat Simple_repeat 5 64 0 2 1208 870 299 187 11 chr13 81693878 81694419 -38589893 - Charlie1 DNA MER1_type -373 2408 1773 2 1208 242 270 16 0 chr13 81694427 81694490 -38589822 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 2 1208 313 350 8 0 chr13 81694536 81694656 -38589656 - B4A SINE B4 -6 286 166 2 1208 606 299 22 0 chr13 81694943 81695077 -38589235 + RSINE1 SINE B4 29 165 0 2 1208 1171 75 6 0 chr13 81696571 81696730 -38587582 + B2_Mm2 SINE B2 2 161 -34 2 1208 342 0 0 0 chr13 81696730 81696768 -38587544 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2 1208 367 269 96 0 chr13 81697228 81697332 -38586980 - B1F1 SINE Alu 0 149 36 2 1208 262 379 9 0 chr13 81699151 81699267 -38585045 + PB1D10 SINE Alu 1 117 0 2 1208 204 67 43 22 chr13 81699369 81699379 -38584933 + (CAAAA)n Simple_repeat Simple_repeat 4 14 0 2 1208 286 273 39 0 chr13 81699379 81699456 -38584856 + ID4 SINE ID 2 81 -2 2 1208 204 67 43 22 chr13 81699456 81699491 -38584821 + (CAAAA)n Simple_repeat Simple_repeat 5 39 0 2 1208 329 305 112 62 chr13 81700706 81700982 -38583330 + B4A SINE B4 3 292 0 2 1208 534 321 40 13 chr13 81701070 81701297 -38583015 + L1MC4 LINE L1 6752 6984 -1058 2 1208 3002 54 39 19 chr13 81701380 81701793 -38582519 - BGLII LTR ERVK 0 421 1 2 1208 237 302 26 8 chr13 81701943 81702060 -38582252 + L1MC4 LINE L1 7415 7533 -509 2 1208 866 231 20 0 chr13 81703712 81703915 -38580397 + B3 SINE B2 1 207 -9 2 1208 301 22 43 0 chr13 81705526 81705572 -38578740 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1208 666 251 53 15 chr13 81706045 81706251 -38578061 + B3 SINE B2 2 215 -1 2 1208 495 157 0 0 chr13 81706706 81706795 -38577517 + (TA)n Simple_repeat Simple_repeat 2 90 0 2 1208 198 0 0 0 chr13 81706796 81706818 -38577494 + (GA)n Simple_repeat Simple_repeat 1 22 0 2 1208 22 0 0 0 chr13 81706893 81706915 -38577397 + AT_rich Low_complexity Low_complexity 1 22 0 2 1208 315 0 0 0 chr13 81708398 81708433 -38575879 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1208 496 187 44 0 chr13 81711358 81711449 -38572863 + B1_Mur1 SINE Alu 15 109 -40 2 1208 31 44 0 0 chr13 81711807 81711852 -38572460 + AT_rich Low_complexity Low_complexity 1 45 0 2 1208 288 0 0 0 chr13 81713309 81713341 -38570971 + (TG)n Simple_repeat Simple_repeat 2 33 0 3 1208 21 57 0 0 chr13 81713636 81713671 -38570641 + AT_rich Low_complexity Low_complexity 1 35 0 3 1208 2557 159 129 76 chr13 81714889 81715390 -38568922 + RMER19C LTR ERVK 2 519 -92 3 1208 2523 187 17 21 chr13 81715390 81715920 -38568392 + RLTR11A LTR ERVK 1 528 0 3 1208 2557 159 129 76 chr13 81715920 81715997 -38568315 + RMER19C LTR ERVK 520 611 0 3 1208 381 286 12 0 chr13 81716851 81716935 -38567377 - PB1D10 SINE Alu -27 90 6 3 1208 183 191 122 41 chr13 81717671 81717720 -38566592 - L2c LINE L2 -158 3229 3177 3 1208 22 35 0 0 chr13 81718052 81718081 -38566231 + AT_rich Low_complexity Low_complexity 1 29 0 3 1208 228 269 147 15 chr13 81720406 81720474 -38563838 - ID4 SINE ID -5 78 2 3 1208 21 0 0 0 chr13 81720845 81720866 -38563446 + AT_rich Low_complexity Low_complexity 1 21 0 3 1208 275 329 106 50 chr13 81721128 81721288 -38563024 + MIRb SINE MIR 66 234 -42 3 1208 1148 62 7 0 chr13 81721350 81721494 -38562818 + B1_Mus2 SINE Alu 1 145 -2 3 1208 221 22 87 0 chr13 81721496 81721542 -38562770 + (CAA)n Simple_repeat Simple_repeat 2 51 0 3 1208 307 291 16 59 chr13 81721673 81721859 -38562453 + (CATG)n Simple_repeat Simple_repeat 1 178 0 3 1208 1117 82 0 0 chr13 81722148 81722295 -38562017 - B1_Mus1 SINE Alu 0 148 2 3 1208 33920 41 0 3 chr13 81724916 81730166 -38554146 + L1Md_T LINE L1 262 5589 -297 3 1208 8311 38 2 0 chr13 81730166 81731160 -38553152 + L1Md_T LINE L1 5590 6585 0 3 1208 1175 55 0 7 chr13 81731174 81731321 -38552991 + B1_Mm SINE Alu 1 146 -1 3 1208 333 47 0 0 chr13 81732439 81732482 -38551830 + (CATA)n Simple_repeat Simple_repeat 1 43 0 3 1208 22 0 0 0 chr13 81733276 81733298 -38551014 + AT_rich Low_complexity Low_complexity 1 22 0 3 1208 931 187 0 0 chr13 81734741 81734896 -38549416 + Lx5 LINE L1 6757 6911 -139 3 1208 354 288 72 55 chr13 81735253 81735543 -38548769 + Lx8 LINE L1 7113 7407 -66 3 1208 907 81 147 0 chr13 81737183 81737319 -38546993 + B2_Mm2 SINE B2 3 158 -37 3 1208 387 0 0 0 chr13 81737323 81737366 -38546946 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 3 1208 8190 84 17 3 chr13 81737694 81739693 -38544619 + L1VL4 LINE L1 19 2048 -1511 3 1208 1228 91 37 5 chr13 81740449 81740637 -38543675 + MusHAL1 LINE L1 915 1108 -1604 3 1208 16732 135 100 10 chr13 81741756 81743035 -38541277 + L1_Mur1 LINE L1 39 1447 -4439 3 1208 2918 61 68 5 chr13 81743035 81743431 -38540881 - BGLII LTR ERVK 0 421 1 3 1208 16732 95 13 6 chr13 81743431 81745882 -38538430 + L1_Mur1 LINE L1 1448 3918 -1968 3 1208 390 74 0 0 chr13 81745882 81745936 -38538376 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1208 200 143 24 0 chr13 81745948 81745990 -38538322 + GA-rich Low_complexity Low_complexity 3 45 0 3 1208 1264 215 23 11 chr13 81746681 81746944 -38537368 + RMER5 LTR ERV1 252 517 -17 3 1208 2656 193 24 121 chr13 81747006 81747673 -38536639 + RMER19C LTR ERVK 10 611 0 3 1208 21 36 0 0 chr13 81747673 81747701 -38536611 + AT_rich Low_complexity Low_complexity 1 28 0 3 1208 373 240 0 0 chr13 81747719 81747794 -38536518 + ID4 SINE ID 1 75 -8 3 1208 24 32 0 0 chr13 81748202 81748233 -38536079 + AT_rich Low_complexity Low_complexity 1 31 0 3 1208 433 256 117 0 chr13 81749353 81749490 -38534822 - Lx8 LINE L1 -134 7339 7187 3 1208 339 351 60 22 chr13 81750024 81750158 -38534154 + B3A SINE B2 6 144 -54 3 1208 360 94 0 0 chr13 81750161 81750214 -38534098 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1208 391 127 32 0 chr13 81750214 81750277 -38534035 + B1_Mur3 SINE Alu 80 144 -5 3 1208 710 61 0 20 chr13 81750289 81750390 -38533922 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 3 1208 1354 94 16 10 chr13 81750391 81750584 -38533728 + B2_Mm2 SINE B2 2 195 0 3 1208 1278 297 45 11 chr13 81751498 81751855 -38532457 - MTD LTR MaLR 0 419 51 3 1208 826 239 143 10 chr13 81752169 81752567 -38531745 - L1MC3 LINE L1 -185 7600 7150 3 1208 243 0 0 0 chr13 81753505 81753532 -38530780 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1208 23251 116 9 50 chr13 81753594 81755407 -38528905 + L1_Mus3 LINE L1 1895 3672 -2211 3 1208 1050 99 0 0 chr13 81755407 81755548 -38528764 + B1_Mus2 SINE Alu 2 142 -5 3 1208 23251 103 7 35 chr13 81755548 81758644 -38525668 + L1_Mus3 LINE L1 3673 6632 -6 3 1208 473 69 42 0 chr13 81759032 81759104 -38525208 + (TCTCCC)n Simple_repeat Simple_repeat 3 77 0 3 1208 275 122 0 20 chr13 81759210 81759260 -38525052 + (TAA)n Simple_repeat Simple_repeat 1 49 0 3 1208 180 347 92 0 chr13 81760217 81760315 -38523997 + L2 LINE L2 2337 2443 -976 3 1208 246 81 0 0 chr13 81760499 81760536 -38523776 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1208 7488 116 82 18 chr13 81760563 81760792 -38523520 + Lx4A LINE L1 4482 4726 -1151 3 1208 180 0 0 0 chr13 81760792 81760812 -38523500 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1208 7488 108 55 13 chr13 81760812 81761981 -38522331 + Lx4A LINE L1 4727 5970 -1088 3 1208 203 179 0 0 chr13 81761990 81762029 -38522283 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3 1208 282 306 47 27 chr13 81762379 81762527 -38521785 + L1MC4a LINE L1 6657 6807 -1075 3 1208 23 54 0 0 chr13 81762678 81762715 -38521597 + AT_rich Low_complexity Low_complexity 1 37 0 3 1208 487 304 157 25 chr13 81762873 81763473 -38520839 + L1M4 LINE L1 582 1260 -5282 3 1208 834 263 205 16 chr13 81763474 81763791 -38520521 - MTD LTR MaLR 0 419 43 3 1208 326 291 56 56 chr13 81763935 81764095 -38520217 + L1M4 LINE L1 1003 1162 -5380 3 1208 1418 62 17 0 chr13 81764396 81764574 -38519738 + B2_Mm2 SINE B2 1 181 -14 3 1208 283 266 83 14 chr13 81764586 81764731 -38519581 + L1M4 LINE L1 1917 2071 -4575 3 1208 689 271 63 34 chr13 81765261 81765712 -38518600 + L1M4 LINE L1 5508 5980 -680 3 1208 3517 131 45 23 chr13 81766806 81767408 -38516904 + Lx LINE L1 6035 6649 -5 3 1208 238 350 59 8 chr13 81770515 81770633 -38513679 - MIR3 SINE MIR -25 183 60 3 1208 2630 70 6 6 chr13 81770968 81771314 -38512998 + L1_Mus3 LINE L1 6290 6635 -3 3 1208 565 236 9 9 chr13 81772909 81773020 -38511292 - B3 SINE B2 -87 129 19 3 1208 249 33 0 0 chr13 81774066 81774096 -38510216 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1208 248 336 139 33 chr13 81774109 81774260 -38510052 - ORR1E LTR MaLR -174 185 19 3 1208 783 142 135 52 chr13 81774318 81774511 -38509801 - RLTR25A LTR ERVK 0 1103 895 3 1208 338 171 0 146 chr13 81774567 81774663 -38509649 - RLTR25B LTR ERVK -182 846 753 3 1208 1511 11 46 0 chr13 81774922 81775097 -38509215 - B2_Mm1a SINE B2 -10 183 1 3 1208 1683 153 108 9 chr13 81775632 81775956 -38508356 + RLTR15 LTR ERVK 4 359 0 3 1208 1061 166 88 0 chr13 81776450 81776655 -38507657 - URR1B DNA MER1_type 0 225 3 3 1208 1115 219 147 133 chr13 81777035 81777322 -38506990 + RMER6C LTR ERVK 1 327 -363 3 1208 774 84 0 0 chr13 81777322 81777429 -38506883 + (GA)n Simple_repeat Simple_repeat 2 108 0 3 1208 1115 187 105 48 chr13 81777429 81777749 -38506563 + RMER6C LTR ERVK 328 697 -59 3 1208 457 193 11 0 chr13 81778189 81778277 -38506035 - Lx9 LINE L1 -632 7012 6924 3 1208 1231 74 0 7 chr13 81779402 81779551 -38504761 - B1_Mus1 SINE Alu 0 148 1 3 1208 270 0 0 0 chr13 81780350 81780380 -38503932 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1208 22 0 0 0 chr13 81782096 81782118 -38502194 + AT_rich Low_complexity Low_complexity 1 22 0 3 1208 643 258 78 10 chr13 81782417 81782443 -38501869 - B3 SINE B2 -11 205 175 3 1208 465 19 0 0 chr13 81782443 81782497 -38501815 + (TATG)n Simple_repeat Simple_repeat 4 57 0 3 1208 643 258 78 10 chr13 81782497 81782662 -38501650 - B3 SINE B2 -42 174 2 3 1208 307 148 27 90 chr13 81782673 81782768 -38501544 + T-rich Low_complexity Low_complexity 15 105 0 3 1208 836 177 7 45 chr13 81782768 81782922 -38501390 - B1_Mur2 SINE Alu 0 149 2 3 1208 307 148 27 90 chr13 81782922 81782937 -38501375 + T-rich Low_complexity Low_complexity 2 14 0 3 1208 484 253 112 0 chr13 81783088 81783258 -38501054 - Lx8 LINE L1 -430 7043 6855 3 1208 549 268 7 32 chr13 81783264 81783418 -38500894 - ORR1D2 LTR MaLR -198 172 23 3 1208 252 0 0 0 chr13 81783553 81783581 -38500731 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1208 1225 37 0 0 chr13 81783596 81783731 -38500581 - B1_Mm SINE Alu -12 135 1 3 1208 358 271 30 30 chr13 81784196 81784329 -38499983 - L1MB7 LINE L1 -14 6170 6038 3 1208 735 330 64 66 chr13 81784407 81784784 -38499528 + Lx8 LINE L1 6967 7331 -142 3 1208 315 0 0 0 chr13 81784784 81784819 -38499493 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1208 735 330 64 66 chr13 81784819 81784938 -38499374 + Lx8 LINE L1 7332 7462 -11 3 1208 387 308 106 26 chr13 81785242 81785515 -38498797 - L1M3 LINE L1 -1526 4614 4320 3 1208 1122 322 47 23 chr13 81785580 81785785 -38498527 - Charlie1a DNA MER1_type -356 1099 896 3 1208 1461 196 149 3 chr13 81785785 81786107 -38498205 - ORR1D1 LTR MaLR -1 373 5 3 1208 1122 322 47 23 chr13 81786107 81786416 -38497896 - Charlie1a DNA MER1_type -560 895 573 3 1208 2474 175 47 11 chr13 81786463 81786930 -38497382 - RLTR16 LTR ERVK 0 505 22 3 1208 27 49 0 0 chr13 81786943 81786984 -38497328 + AT_rich Low_complexity Low_complexity 1 41 0 3 1208 275 127 18 18 chr13 81786996 81787052 -38497260 - Lx9 LINE L1 -76 7568 7513 3 1208 228 67 0 0 chr13 81787054 81787084 -38497228 + (CATA)n Simple_repeat Simple_repeat 4 33 0 3 1208 731 257 40 0 chr13 81787394 81787569 -38496743 - B3A SINE B2 -16 182 1 3 1208 285 228 158 0 chr13 81787672 81787729 -38496583 - ID4_ SINE ID -9 74 9 3 1208 1926 249 69 28 chr13 81787934 81788570 -38495742 - RLTR40 LTR ERVK -64 753 92 3 18 7946 18 0 0 chr13 81788823 81789695 -38494617 - MERVL-int LTR ERVL -2385 3100 2229 3 1209 529 215 0 0 chr13 81789698 81789791 -38494521 - B1_Mur2 SINE Alu -55 94 2 3 1209 383 188 0 20 chr13 81790059 81790139 -38494173 + GA-rich Low_complexity Low_complexity 5 83 0 3 1209 1055 139 0 6 chr13 81790139 81790320 -38493992 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 1209 383 188 0 20 chr13 81790320 81790337 -38493975 + polypurine Low_complexity Low_complexity 84 100 0 4 1209 25 0 0 0 chr13 81790692 81790717 -38493595 + AT_rich Low_complexity Low_complexity 1 25 0 4 1209 201 246 108 0 chr13 81790906 81790971 -38493341 + L3 LINE CR1 4207 4278 -211 4 1209 237 309 230 47 chr13 81791243 81791521 -38492791 + L2 LINE L2 2686 3014 -405 4 1209 228 276 17 0 chr13 81791539 81791597 -38492715 + CT-rich Low_complexity Low_complexity 4 62 0 4 1209 317 282 0 14 chr13 81791770 81791842 -38492470 - ID_B1 SINE B4 -63 161 91 4 1209 1998 116 6 69 chr13 81792663 81792997 -38491315 + ORR1A4 LTR MaLR 2 314 -15 4 1209 2016 161 88 8 chr13 81794146 81794508 -38489804 + MTC LTR MaLR 31 421 0 4 1209 325 268 15 89 chr13 81794573 81794708 -38489604 - B4A SINE B4 -123 169 45 4 1209 273 29 0 0 chr13 81795881 81795915 -38488397 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 4 1209 252 0 0 0 chr13 81796140 81796168 -38488144 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1209 22 35 0 0 chr13 81796581 81796610 -38487702 + GC_rich Low_complexity Low_complexity 1 29 0 4 1209 180 152 0 0 chr13 81796794 81796827 -38487485 + (CGG)n Simple_repeat Simple_repeat 2 34 0 4 1209 2337 109 19 3 chr13 81798621 81798943 -38485369 - ORR1A2 LTR MaLR 0 327 1 4 1209 1106 193 56 112 chr13 81798977 81799280 -38485032 - MTD LTR MaLR -127 292 7 4 1209 2683 53 71 0 chr13 81799562 81799885 -38484427 - ORR1A1 LTR MaLR 0 346 1 4 1209 14691 52 19 1 chr13 81799885 81801645 -38482667 - ORR1A1-int LTR MaLR 0 1792 1 4 1209 2402 56 66 0 chr13 81801645 81801965 -38482347 - ORR1A1 LTR MaLR 0 346 6 4 1209 460 256 8 33 chr13 81802574 81802695 -38481617 - PB1D9 SINE Alu 0 120 3 4 1209 398 299 105 16 chr13 81802696 81802886 -38481426 + RCHARR1 DNA MER1_type 1 207 -767 4 1209 458 221 86 40 chr13 81802943 81803094 -38481218 + RCHARR1 DNA MER1_type 341 498 -476 4 1209 321 203 120 13 chr13 81803134 81803209 -38481103 + RSINE1 SINE B4 72 154 -11 4 1209 346 303 107 27 chr13 81803228 81803452 -38480860 + RCHARR1 DNA MER1_type 496 737 -237 4 1209 381 277 45 0 chr13 81803480 81803592 -38480720 - RSINE1 SINE B4 -38 127 11 4 1209 277 255 232 43 chr13 81803634 81803798 -38480514 + RCHARR1 DNA MER1_type 764 958 -16 4 1209 463 226 144 8 chr13 81804661 81804786 -38479526 - B3A SINE B2 -55 143 2 4 1209 259 250 0 0 chr13 81804858 81804926 -38479386 - Charlie2b DNA MER1_type -354 2428 2361 4 1209 2757 150 70 86 chr13 81805272 81805972 -38478340 - RMER6A LTR ERVK -11 745 57 4 1209 210 264 0 0 chr13 81806657 81806710 -38477602 - MIR SINE MIR -85 177 125 4 1209 24 53 0 0 chr13 81809221 81809259 -38475053 + AT_rich Low_complexity Low_complexity 1 38 0 4 1209 468 0 0 0 chr13 81812053 81812105 -38472207 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1209 358 327 85 68 chr13 81812128 81812423 -38471889 - Lx8 LINE L1 -183 7290 6991 4 1209 23 0 0 0 chr13 81812853 81812876 -38471436 + AT_rich Low_complexity Low_complexity 1 23 0 4 1209 1112 44 0 81 chr13 81815747 81815896 -38468416 + B1_Mus2 SINE Alu 1 137 -10 4 1209 233 29 29 0 chr13 81815896 81815930 -38468382 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 4 1209 377 250 30 50 chr13 81816186 81816287 -38468025 + PB1D7 SINE Alu 7 105 -15 4 1209 267 311 49 25 chr13 81816287 81816308 -38468004 + ID_B1 SINE B4 88 212 -12 4 1209 331 314 0 0 chr13 81817107 81817225 -38467087 + CT-rich Low_complexity Low_complexity 1 118 0 4 1209 1313 40 0 0 chr13 81818008 81818156 -38466156 + B1_Mus1 SINE Alu 1 148 0 4 1209 335 322 152 33 chr13 81818442 81818686 -38465626 - B4A SINE B4 -18 274 2 4 1209 189 74 0 0 chr13 81818935 81818962 -38465350 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1209 343 173 119 36 chr13 81820328 81820376 -38463936 + B3 SINE B2 125 181 -35 4 1209 408 40 0 0 chr13 81820376 81820426 -38463886 + (CATA)n Simple_repeat Simple_repeat 1 50 0 4 1209 343 173 119 36 chr13 81820426 81820461 -38463851 + B3 SINE B2 182 214 -2 4 1209 189 0 0 0 chr13 81820528 81820549 -38463763 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 1209 306 0 0 0 chr13 81821221 81821255 -38463057 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 4 1209 1315 72 66 0 chr13 81821269 81821284 -38463028 - B2_Mm2 SINE B2 -15 180 166 4 1209 423 0 0 0 chr13 81821284 81821331 -38462981 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1209 1315 72 66 0 chr13 81821331 81821482 -38462830 - B2_Mm2 SINE B2 -30 165 4 4 1209 2312 115 20 58 chr13 81822246 81822418 -38461894 + ORR1B1 LTR MaLR 5 157 -237 4 1209 450 0 0 0 chr13 81822418 81822468 -38461844 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 1209 2312 115 20 58 chr13 81822468 81822692 -38461620 + ORR1B1 LTR MaLR 158 386 -8 4 1209 3495 153 156 10 chr13 81822719 81823451 -38460861 + ORR1B1-int LTR MaLR 14 852 -406 4 1209 1029 178 0 11 chr13 81823455 81823631 -38460681 + ORR1B1 LTR MaLR 248 421 0 4 1209 25 51 0 0 chr13 81823919 81823958 -38460354 + AT_rich Low_complexity Low_complexity 1 39 0 4 1209 380 253 139 40 chr13 81823958 81824131 -38460181 - B3A SINE B2 -4 194 5 4 1209 1236 68 0 0 chr13 81824297 81824443 -38459869 - B1_Mus1 SINE Alu -1 147 2 4 1209 216 170 0 0 chr13 81824961 81825014 -38459298 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1209 192 275 161 27 chr13 81825154 81825266 -38459046 + L2a LINE L2 3295 3421 -5 4 1209 1113 137 52 33 chr13 81825396 81825607 -38458705 + RLTR11B LTR ERVK 239 453 0 4 1209 333 261 315 5 chr13 81825629 81825845 -38458467 - Lx8 LINE L1 -9 7464 7182 4 1209 30 45 0 0 chr13 81826593 81826637 -38457675 + AT_rich Low_complexity Low_complexity 1 44 0 4 1209 302 263 0 37 chr13 81826706 81826790 -38457522 - ID4_ SINE ID -53 99 24 4 1209 757 256 32 50 chr13 81826824 81827042 -38457270 + B3 SINE B2 1 214 -2 4 1209 1447 90 5 5 chr13 81827188 81827377 -38456935 - B2_Mm1t SINE B2 -4 189 1 4 1209 471 217 120 49 chr13 81827973 81828157 -38456155 + B3A SINE B2 1 197 -1 4 1209 1370 72 55 0 chr13 81828309 81828490 -38455822 - B2_Mm1t SINE B2 -1 192 2 4 1209 891 224 132 8 chr13 81828880 81829114 -38455198 + Lx7 LINE L1 7032 7294 -402 4 1209 23 33 0 0 chr13 81829354 81829384 -38454928 + AT_rich Low_complexity Low_complexity 1 30 0 4 1209 686 137 97 0 chr13 81829895 81830019 -38454293 + URR1B DNA MER1_type 86 221 -4 4 1209 239 347 27 0 chr13 81830137 81830212 -38454100 + ID4 SINE ID 4 80 -3 4 1209 647 327 101 34 chr13 81830324 81830789 -38453523 - Looper DNA PiggyBac -500 1058 563 4 1209 258 205 54 108 chr13 81831149 81831242 -38453070 - Looper DNA PiggyBac -1008 550 463 4 1209 634 265 14 7 chr13 81831245 81831393 -38452919 + B1_Mur1 SINE Alu 1 149 0 4 1209 232 341 0 24 chr13 81831512 81831596 -38452716 + Tigger7 DNA MER2_type 2409 2490 -1 4 1209 249 57 0 0 chr13 81831762 81831797 -38452515 + ORR1C1 LTR MaLR 1 35 -311 4 1209 2390 104 31 0 chr13 81831799 81832116 -38452196 + ORR1A2 LTR MaLR 1 327 0 4 1209 1406 206 101 6 chr13 81832143 81832471 -38451841 + ORR1C1 LTR MaLR 20 378 0 4 1209 36 0 0 0 chr13 81832655 81832691 -38451621 + AT_rich Low_complexity Low_complexity 1 36 0 4 1209 342 301 111 34 chr13 81833207 81833441 -38450871 + L1ME4a LINE L1 5648 5899 -225 4 1209 407 241 33 66 chr13 81833923 81834074 -38450238 + B1F SINE Alu 3 149 0 4 1209 1721 21 0 0 chr13 81834166 81834358 -38449954 + B2_Mm1a SINE B2 2 193 0 4 1209 1367 85 32 5 chr13 81834557 81834746 -38449566 + B2_Mm2 SINE B2 2 195 0 4 1209 411 296 159 0 chr13 81835487 81835619 -38448693 + Lx9 LINE L1 6364 6516 -1128 4 1209 1405 282 60 22 chr13 81835684 81836134 -38448178 + Lx9 LINE L1 6634 7100 -544 4 1209 3167 214 133 67 chr13 81836134 81837163 -38447149 + RLTR25A LTR ERVK 7 1103 0 4 1209 1083 294 24 56 chr13 81837163 81837631 -38446681 + Lx9 LINE L1 7094 7546 -98 4 1209 1165 94 6 0 chr13 81837632 81837802 -38446510 + B2_Mm1a SINE B2 1 171 -22 4 1209 486 0 0 0 chr13 81837802 81837856 -38446456 + (GAAA)n Simple_repeat Simple_repeat 2 55 0 4 1209 306 0 0 0 chr13 81838502 81838536 -38445776 + (CATA)n Simple_repeat Simple_repeat 3 36 0 4 1209 677 232 78 16 chr13 81839068 81839261 -38445051 + Lx7 LINE L1 6985 7189 -507 4 1209 258 261 18 127 chr13 81839271 81839381 -38444931 + Lx7 LINE L1 7146 7243 -453 4 1209 183 205 0 0 chr13 81839863 81839902 -38444410 + GA-rich Low_complexity Low_complexity 3 41 0 4 1209 342 298 91 0 chr13 81840294 81840415 -38443897 - B1F2 SINE Alu -17 132 1 4 1209 1162 175 147 29 chr13 81840415 81840727 -38443585 - ORR1B1 LTR MaLR -5 389 41 4 1209 421 222 19 0 chr13 81840766 81840990 -38443322 + (TG)n Simple_repeat Simple_repeat 1 228 0 4 1209 456 228 99 104 chr13 81840990 81841191 -38443121 - B4A SINE B4 0 292 93 4 1209 257 232 0 0 chr13 81841241 81841310 -38443002 + A-rich Low_complexity Low_complexity 1 69 0 4 1209 1497 262 111 46 chr13 81841475 81842188 -38442124 + RCHARR1 DNA MER1_type 216 974 0 4 1209 471 234 105 92 chr13 81843652 81843932 -38440380 + Lx7 LINE L1 5502 5779 -1917 4 1209 2955 79 15 2 chr13 81843932 81844327 -38439985 - MTB LTR MaLR 0 400 1 4 1209 471 290 30 116 chr13 81844327 81844450 -38439862 + Lx7 LINE L1 5780 5898 -1798 4 1209 22 35 0 0 chr13 81844814 81844843 -38439469 + AT_rich Low_complexity Low_complexity 1 29 0 4 1209 1121 68 0 26 chr13 81845251 81845402 -38438910 + B1_Mus1 SINE Alu 1 147 -1 4 1209 21 0 0 0 chr13 81845990 81846011 -38438301 + AT_rich Low_complexity Low_complexity 1 21 0 4 1209 533 45 0 63 chr13 81846357 81846452 -38437860 - Lx LINE L1 0 6654 6566 4 1209 227 250 18 18 chr13 81846817 81846874 -38437438 - PB1D10 SINE Alu -32 85 29 4 1209 1128 89 0 0 chr13 81847314 81847460 -38436852 - B1_Mus1 SINE Alu -1 147 2 4 1209 362 270 127 0 chr13 81847529 81847655 -38436657 - B3A SINE B2 -9 189 48 4 1209 246 300 135 18 chr13 81848342 81848505 -38435807 - L2a LINE L2 -30 3396 3215 4 1209 240 35 0 0 chr13 81850436 81850465 -38433847 + (CAG)n Simple_repeat Simple_repeat 3 31 0 4 1209 22202 175 187 69 chr13 81851784 81852801 -38431511 - Lx5 LINE L1 -4 7054 5793 4 1209 1085 43 64 21 chr13 81852801 81852942 -38431370 - B1_Mus2 SINE Alu 0 147 1 4 1209 22202 144 30 91 chr13 81852942 81853447 -38430865 - Lx5 LINE L1 -85 5792 5297 4 1209 1109 140 34 0 chr13 81853447 81853625 -38430687 - B2_Mm1a SINE B2 -9 184 1 4 1209 22202 144 30 91 chr13 81853625 81854215 -38430097 - Lx5 LINE L1 -581 5296 4727 4 1209 279 0 0 0 chr13 81854215 81854246 -38430066 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1209 22202 144 30 91 chr13 81854246 81855460 -38428852 - Lx5 LINE L1 -1151 4726 3479 4 1209 194 0 39 0 chr13 81855460 81855486 -38428826 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 5 1209 22202 144 30 91 chr13 81855486 81856418 -38427894 - Lx5 LINE L1 -2399 3478 2717 4 1209 333 34 33 33 chr13 81856427 81856487 -38427825 + (TTTG)n Simple_repeat Simple_repeat 2 61 0 5 1209 478 159 0 47 chr13 81856487 81856563 -38427749 - BC1_Mm scRNA scRNA -76 76 1 5 1209 22202 144 30 91 chr13 81856563 81857678 -38426634 - Lx5 LINE L1 -3161 2716 1591 4 1209 1129 61 0 26 chr13 81857678 81857829 -38426483 - B1_Mm SINE Alu 0 147 1 5 1209 22202 144 30 91 chr13 81857829 81857982 -38426330 - Lx5 LINE L1 -4287 1590 1437 4 1209 2862 70 0 10 chr13 81857987 81858376 -38425936 - L1_Mus4 LINE L1 0 6636 6252 5 1209 4514 6 0 24 chr13 81858376 81858881 -38425431 - MT2_Mm LTR ERVL 0 493 1 5 1209 321 0 0 0 chr13 81858881 81858919 -38425393 - MERVL-int LTR ERVL 0 5485 5448 5 1209 362 167 46 35 chr13 81858919 81859006 -38425306 - ORR1A3-int LTR MaLR -1323 640 553 5 1209 45557 15 7 0 chr13 81859006 81864016 -38420296 - MERVL-int LTR ERVL -125 5360 317 5 1209 396 0 0 0 chr13 81864011 81864056 -38420256 - MERVL-int LTR ERVL -5440 45 1 5 1209 4514 6 0 24 chr13 81864056 81864561 -38419751 - MT2_Mm LTR ERVL 0 493 1 5 1209 3216 90 5 2 chr13 81864561 81864994 -38419318 - L1_Mus4 LINE L1 -380 6256 5823 5 1209 1932 178 17 26 chr13 81864983 81865575 -38418737 - Lx5 LINE L1 -4420 1457 868 4 1209 34 0 0 0 chr13 81865766 81865800 -38418512 + AT_rich Low_complexity Low_complexity 1 34 0 5 1209 906 176 0 20 chr13 81866207 81866358 -38417954 + B1_Mur2 SINE Alu 1 148 -1 5 1209 556 211 19 0 chr13 81866470 81866574 -38417738 + B1_Mur2 SINE Alu 1 106 -43 5 1209 246 128 0 0 chr13 81866575 81866614 -38417698 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1209 26 50 0 0 chr13 81866731 81866771 -38417541 + AT_rich Low_complexity Low_complexity 1 40 0 5 1209 424 273 18 35 chr13 81866847 81866961 -38417351 + RSINE1 SINE B4 2 113 -52 5 1209 378 0 0 0 chr13 81867005 81867047 -38417265 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1209 1731 130 18 68 chr13 81867077 81867416 -38416896 - RLTRETN_Mm LTR ERVK 0 322 1 5 1209 2646 174 22 20 chr13 81867535 81868040 -38416272 - RLTR19C LTR ERVK 0 506 1 5 1209 715 231 23 129 chr13 81869043 81869208 -38415104 - RLTR18B LTR ERVK -68 444 305 5 1209 1107 51 14 0 chr13 81869208 81869346 -38414966 + B1_Mm SINE Alu 1 140 -7 5 1209 194 0 39 0 chr13 81869348 81869374 -38414938 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1209 1007 206 134 44 chr13 81869374 81869718 -38414594 - RLTR18B LTR ERVK -204 412 1 5 1209 3993 72 11 9 chr13 81870207 81870743 -38413569 + L1_Mus3 LINE L1 6102 6638 0 5 1209 1193 201 211 6 chr13 81872399 81872740 -38411572 + MTD LTR MaLR 1 411 -8 5 1209 215 383 12 24 chr13 81873103 81873269 -38411043 - MER5A DNA MER1_type -2 187 24 5 1209 332 331 74 6 chr13 81873373 81873549 -38410763 + MER5A DNA MER1_type 2 189 0 5 1209 280 299 31 10 chr13 81873591 81873689 -38410623 - ORR1E LTR MaLR -259 100 1 5 1209 315 284 0 0 chr13 81873823 81873904 -38410408 - ID4_ SINE ID 0 83 3 5 1209 213 269 0 29 chr13 81873950 81874019 -38410293 - MIR SINE MIR -72 190 124 5 1209 228 348 52 9 chr13 81874165 81874281 -38410031 - MIR SINE MIR -22 240 120 5 1209 1732 200 176 58 chr13 81874714 81875249 -38409063 - MT2B LTR ERVL -3 598 1 5 1209 302 257 14 0 chr13 81875261 81875335 -38408977 - ID4_ SINE ID -8 75 1 5 1209 871 210 285 15 chr13 81875687 81876076 -38408236 + RLTR18B LTR ERVK 1 494 -18 5 1209 342 0 0 0 chr13 81876080 81876118 -38408194 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1209 288 311 24 16 chr13 81876248 81876372 -38407940 - L1MD LINE L1 -2061 4085 3961 5 1209 1259 34 0 0 chr13 81876385 81876531 -38407781 - B1_Mus2 SINE Alu 0 147 2 5 1209 399 149 0 0 chr13 81876565 81876639 -38407673 + (TCC)n Simple_repeat Simple_repeat 2 75 0 5 1209 293 289 100 0 chr13 81876648 81876762 -38407550 - B1F SINE Alu -24 125 1 5 1209 218 367 42 0 chr13 81876660 81876780 -38407532 - ID_B1 SINE B4 -36 188 64 5 1209 252 59 0 0 chr13 81876786 81876820 -38407492 + (TTATA)n Simple_repeat Simple_repeat 1 34 0 5 1209 32 75 0 0 chr13 81876820 81876887 -38407425 + AT_rich Low_complexity Low_complexity 1 67 0 5 1209 561 253 51 19 chr13 81876938 81877095 -38407217 - RSINE1 SINE B4 -1 164 3 5 1209 389 294 100 9 chr13 81877232 81877452 -38406860 - L1M4 LINE L1 -2467 3679 3440 5 1209 325 306 31 18 chr13 81877981 81878144 -38406168 - L1MEe LINE L1 -869 5274 5110 5 1209 2478 199 95 49 chr13 81878335 81878563 -38405749 - RMER1A Other Other -16 1014 755 5 1209 4329 23 12 0 chr13 81878563 81879050 -38405262 + MT2_Mm LTR ERVL 1 493 0 5 1209 2478 199 95 49 chr13 81879050 81879103 -38405209 - RMER1A Other Other -276 754 727 5 1209 5749 47 37 0 chr13 81879103 81879807 -38404505 + L1Md_F2 LINE L1 5852 6581 -1 5 1209 2478 199 95 49 chr13 81879807 81880158 -38404154 - RMER1A Other Other -304 726 354 5 1209 333 271 84 14 chr13 81880892 81881034 -38403278 + RMER15 LTR ERVL 422 573 -2 5 1209 858 325 56 5 chr13 81881036 81881413 -38402899 - L1MEe LINE L1 -1208 4935 4540 5 1209 1279 233 44 55 chr13 81881449 81881813 -38402499 + MTE2a LTR MaLR 20 379 0 5 1209 288 308 55 39 chr13 81881845 81882102 -38402210 - L1MEe LINE L1 -1635 4508 4248 5 1209 576 248 29 22 chr13 81882102 81882231 -38402081 + B1_Mur2 SINE Alu 2 131 -18 5 1209 915 144 125 16 chr13 81882231 81882415 -38401897 - ORR1C2 LTR MaLR 0 384 181 5 1209 1793 195 91 51 chr13 81882427 81883050 -38401262 - RMER17B LTR ERVK -237 669 1 5 1209 755 195 109 24 chr13 81883054 81883264 -38401048 - ORR1C2-int LTR MaLR -1142 228 1 5 1209 1095 186 100 46 chr13 81883262 81883485 -38400827 - ORR1C2 LTR MaLR -2 382 149 5 1209 354 45 0 0 chr13 81883485 81883529 -38400783 + (CAGA)n Simple_repeat Simple_repeat 3 46 0 5 1209 1095 186 100 46 chr13 81883529 81883586 -38400726 - ORR1C2 LTR MaLR -236 148 88 5 1209 560 88 0 0 chr13 81883607 81883687 -38400625 - RLTR23 LTR ERV1 0 430 351 5 1209 276 77 0 0 chr13 81883702 81883741 -38400571 - RLTR23 LTR ERV1 -127 303 265 5 1209 320 256 0 0 chr13 81883745 81883823 -38400489 - B3A SINE B2 -118 80 3 5 1209 467 244 87 77 chr13 81883830 81884025 -38400287 - B3A SINE B2 0 198 2 5 1209 1511 294 145 40 chr13 81884025 81884677 -38399635 - L1MEe LINE L1 -2299 3844 3123 5 1209 248 0 0 30 chr13 81884677 81884710 -38399602 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 5 1209 1511 294 145 40 chr13 81884710 81884890 -38399422 - L1MEe LINE L1 -3021 3122 2921 5 1209 592 227 79 135 chr13 81884890 81885119 -38399193 - B3 SINE B2 0 216 1 5 1209 1511 280 132 38 chr13 81885119 81885920 -38398392 - L1MEe LINE L1 -3223 2920 2047 5 1209 1374 91 27 0 chr13 81886139 81886325 -38397987 + B2_Mm2 SINE B2 1 191 -4 5 1209 231 312 36 0 chr13 81886395 81886533 -38397779 - L1_Mur1 LINE L1 -4084 1802 1660 5 1209 524 116 0 11 chr13 81886633 81886720 -38397592 + (TTTTC)n Simple_repeat Simple_repeat 4 89 0 5 1209 356 133 0 16 chr13 81886720 81886781 -38397531 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 5 1209 300 253 28 40 chr13 81887120 81887297 -38397015 - L1M4 LINE L1 -2834 3312 3138 5 1209 685 218 148 5 chr13 81887312 81887501 -38396811 - B3 SINE B2 0 216 1 5 1209 394 285 14 42 chr13 81887764 81887907 -38396405 - RLTR43A LTR ERVK -3 361 223 5 1209 651 165 16 0 chr13 81888107 81888234 -38396078 - Lx2 LINE L1 0 6997 6869 5 1209 361 260 71 71 chr13 81888234 81888503 -38395809 - L1M4 LINE L1 -3306 2840 2572 5 1209 348 238 18 114 chr13 81888520 81888634 -38395678 - B1F SINE Alu 0 149 47 5 1209 520 155 24 24 chr13 81888635 81888800 -38395512 + (CA)n Simple_repeat Simple_repeat 2 166 0 5 1209 246 62 0 0 chr13 81889488 81889520 -38394792 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1209 25 0 0 0 chr13 81889889 81889914 -38394398 + AT_rich Low_complexity Low_complexity 1 25 0 5 1209 231 312 12 0 chr13 81890771 81890851 -38393461 + (CA)n Simple_repeat Simple_repeat 2 82 0 5 1209 5235 217 80 15 chr13 81892576 81893354 -38390958 + ORR1D1-int LTR MaLR 74 876 -494 5 1209 4074 127 69 18 chr13 81893354 81894034 -38390278 - RLTR19B LTR ERVK 0 715 1 5 1209 5235 209 78 16 chr13 81894034 81894477 -38389835 + ORR1D1-int LTR MaLR 877 1368 -2 5 1209 1921 170 33 3 chr13 81894479 81894839 -38389473 + ORR1D1 LTR MaLR 1 371 -3 5 1209 1210 41 7 0 chr13 81895617 81895763 -38388549 + B1_Mus2 SINE Alu 1 147 0 5 1209 830 102 0 8 chr13 81896846 81896974 -38387338 + (GAA)n Simple_repeat Simple_repeat 1 127 0 5 1209 1450 256 35 25 chr13 81896977 81897490 -38386822 + L1_Mur3 LINE L1 1594 2111 -3769 5 1209 1107 183 9 1 chr13 81897488 81897739 -38386573 + L1_Mur3 LINE L1 3893 4151 -1735 5 1209 1424 193 80 97 chr13 81897823 81897960 -38386352 + MTC LTR MaLR 41 205 -216 5 1209 1134 65 0 0 chr13 81897960 81898098 -38386214 + B1_Mus1 SINE Alu 1 138 -10 5 1209 513 0 0 0 chr13 81898098 81898155 -38386157 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1209 597 64 0 0 chr13 81898162 81898240 -38386072 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 5 1209 1424 193 80 97 chr13 81898240 81898463 -38385849 + MTC LTR MaLR 206 403 -18 5 1209 1545 213 29 47 chr13 81898463 81898871 -38385441 + MTC-int LTR MaLR 1 401 -857 5 1209 286 156 16 0 chr13 81898877 81898941 -38385371 + Lx9 LINE L1 7580 7644 0 5 1209 392 349 0 16 chr13 81899181 81899309 -38385003 - RCHARR1 DNA MER1_type -821 153 28 5 1209 368 274 120 58 chr13 81899880 81900105 -38384207 + LTR37B LTR ERV1 226 464 -4 5 1209 797 298 20 0 chr13 81900098 81900296 -38384016 + B3 SINE B2 13 214 -2 5 1209 336 281 50 119 chr13 81900417 81900521 -38383791 - MT2B LTR ERVL -246 355 186 5 1209 459 196 31 42 chr13 81900521 81900617 -38383695 - PB1D10 SINE Alu -20 97 3 5 1209 336 281 50 119 chr13 81900617 81900635 -38383677 - MT2B LTR ERVL -246 185 153 5 1209 33 25 0 0 chr13 81901282 81901322 -38382990 + AT_rich Low_complexity Low_complexity 1 40 0 5 1209 456 262 77 39 chr13 81901430 81901585 -38382727 + RSINE1 SINE B4 3 163 -2 5 1209 1181 34 0 13 chr13 81901873 81902022 -38382290 - B1_Mus2 SINE Alu 0 147 1 5 1209 213 368 13 0 chr13 81902795 81902871 -38381441 + ID4_ SINE ID 5 81 -2 5 1209 456 194 107 0 chr13 81903553 81903656 -38380656 - PB1D9 SINE Alu -3 117 4 5 1209 215 379 6 6 chr13 81903887 81904065 -38380247 + GA-rich Low_complexity Low_complexity 3 180 0 5 1209 353 242 182 85 chr13 81904459 81904635 -38379677 + LTR16C LTR ERVL 289 481 -8 5 1209 360 43 0 0 chr13 81905167 81905213 -38379099 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1209 239 306 51 59 chr13 81905215 81905333 -38378979 + RMER21A LTR ERV1 651 767 -180 5 1209 265 311 75 8 chr13 81905401 81905521 -38378791 + MIR SINE MIR 22 149 -59 5 1209 233 69 0 0 chr13 81905521 81905550 -38378762 + (GGA)n Simple_repeat Simple_repeat 3 31 0 5 1209 255 61 0 0 chr13 81905551 81905584 -38378728 + (ATGGTG)n Simple_repeat Simple_repeat 6 38 0 5 1209 221 129 0 0 chr13 81905584 81905615 -38378697 + (GGA)n Simple_repeat Simple_repeat 3 33 0 5 1209 299 303 177 36 chr13 81906181 81906373 -38377939 - Charlie8 DNA MER1_type -2152 276 58 5 1209 225 94 0 0 chr13 81906636 81906668 -38377644 + (CGGGGG)n Simple_repeat Simple_repeat 3 34 0 5 1209 248 200 217 0 chr13 81907152 81907212 -38377100 - tRNA-Ala-GCY_ tRNA tRNA -1 74 2 5 1209 502 347 72 42 chr13 81907676 81907983 -38376329 + L1MDa LINE L1 139 454 -6179 5 1209 349 282 53 88 chr13 81908174 81908345 -38375967 + MER90a LTR ERV1 449 613 -1 6 1209 306 278 73 18 chr13 81908767 81908877 -38375435 + B3 SINE B2 59 174 -42 6 1209 30 0 0 0 chr13 81908920 81908950 -38375362 + AT_rich Low_complexity Low_complexity 1 30 0 6 1209 417 268 26 0 chr13 81909731 81909884 -38374428 + L1MA6 LINE L1 6079 6235 -65 6 1209 4592 86 84 54 chr13 81910425 81911190 -38373122 - RLTR13C2 LTR ERVK -20 788 1 6 1209 328 365 97 68 chr13 81911190 81911319 -38372993 + MER115 DNA Tip100 298 432 -261 6 1209 1000 215 40 40 chr13 81911457 81911685 -38372627 + RMER15 LTR ERVL 347 574 -1 6 1209 774 280 27 84 chr13 81911685 81911928 -38372384 - MTE2a LTR MaLR -151 228 1 6 1209 222 189 0 0 chr13 81912254 81912279 -38372033 + A-rich Low_complexity Low_complexity 1 25 0 6 1209 252 0 0 0 chr13 81912279 81912307 -38372005 + (CCA)n Simple_repeat Simple_repeat 1 28 0 6 1209 222 189 0 0 chr13 81912307 81912334 -38371978 + A-rich Low_complexity Low_complexity 26 52 0 6 1209 2395 235 75 35 chr13 81912337 81912943 -38371369 - RLTR40 LTR ERVK -68 749 111 6 1209 812 183 40 23 chr13 81912943 81913116 -38371196 - B2_Mm2 SINE B2 -18 177 2 6 1209 2395 235 75 35 chr13 81913116 81913215 -38371097 - RLTR40 LTR ERVK -707 110 16 6 1209 479 279 99 99 chr13 81913247 81913712 -38370600 + LTR37B LTR ERV1 4 468 0 6 1209 189 294 128 102 chr13 81913718 81913983 -38370329 - L2 LINE L2 -842 2577 2306 6 1209 289 325 225 66 chr13 81914523 81914878 -38369434 + LTR16B1 LTR ERVL 2 412 -68 6 1209 368 353 89 16 chr13 81915084 81915453 -38368859 - L1MC5 LINE L1 -184 7777 7382 6 1209 489 261 98 39 chr13 81915540 81915847 -38368465 - L1MB4 LINE L1 -222 5958 5634 6 1209 458 272 131 27 chr13 81916239 81916568 -38367744 - L1MA6 LINE L1 0 6300 5938 6 1209 401 157 0 4 chr13 81916754 81916827 -38367485 + ORR1C2 LTR MaLR 276 384 0 6 1209 1376 261 36 13 chr13 81916836 81917143 -38367169 - MTE2b LTR MaLR -65 314 1 6 1209 198 0 0 0 chr13 81917467 81917489 -38366823 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 6 1209 291 310 111 8 chr13 81918356 81918454 -38365858 - MLT1E2 LTR MaLR -60 445 336 6 1209 390 335 26 6 chr13 81918454 81918610 -38365702 + RMER30 DNA MER1_type 2 160 -42 6 1209 348 325 57 77 chr13 81918698 81918945 -38365367 - MLT1E2 LTR MaLR -263 242 1 6 1209 2276 108 12 0 chr13 81919293 81919616 -38364696 - ORR1A2 LTR MaLR 0 327 1 6 1209 475 68 0 14 chr13 81919650 81919724 -38364588 + L1Md_F2 LINE L1 6500 6572 -10 6 1210 339 279 19 128 chr13 81920372 81920528 -38363784 - RSINE1 SINE B4 0 165 27 6 1210 1222 55 0 0 chr13 81920899 81921045 -38363267 - B1_Mus1 SINE Alu -1 147 2 6 1210 451 227 164 0 chr13 81921083 81921211 -38363101 - B1_Mur1 SINE Alu 0 149 1 6 1210 189 273 43 139 chr13 81921482 81921597 -38362715 - L2c LINE L2 -5 3382 3279 6 1210 29 0 0 0 chr13 81922716 81922745 -38361567 + GC_rich Low_complexity Low_complexity 1 29 0 6 1210 189 0 0 0 chr13 81923152 81923173 -38361139 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1210 704 295 75 26 chr13 81924119 81924384 -38359928 - B4A SINE B4 -10 282 5 6 1210 24 96 0 0 chr13 81926690 81926763 -38357549 + AT_rich Low_complexity Low_complexity 1 73 0 6 1210 270 278 127 50 chr13 81926826 81927046 -38357266 + MIR SINE MIR 19 255 -7 6 1210 422 274 34 17 chr13 81927060 81927179 -38357133 + B1_Mur1 SINE Alu 26 146 -3 6 1210 709 145 138 83 chr13 81928709 81928890 -38355422 - B2_Mm2 SINE B2 -3 192 2 6 1210 703 204 97 17 chr13 81930490 81930665 -38353647 - B3 SINE B2 -20 196 8 6 1210 207 0 0 0 chr13 81931557 81931580 -38352732 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1210 24 0 0 0 chr13 81932424 81932448 -38351864 + AT_rich Low_complexity Low_complexity 1 24 0 6 1210 312 94 0 0 chr13 81932848 81932901 -38351411 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1210 440 344 18 24 chr13 81932973 81933137 -38351175 - B4A SINE B4 -127 165 3 6 1210 21 0 0 0 chr13 81933434 81933455 -38350857 + AT_rich Low_complexity Low_complexity 1 21 0 6 1210 1129 88 0 0 chr13 81934736 81934884 -38349428 - B1_Mus1 SINE Alu 0 148 1 6 1210 25 31 0 0 chr13 81935453 81935485 -38348827 + AT_rich Low_complexity Low_complexity 1 32 0 6 1210 23 54 0 0 chr13 81938634 81938671 -38345641 + AT_rich Low_complexity Low_complexity 1 37 0 6 1210 378 345 41 0 chr13 81939130 81939145 -38345167 + ID_B1 SINE B4 64 126 -98 6 1210 467 286 54 0 chr13 81939145 81939257 -38345055 + B1F SINE Alu 1 118 -31 6 1210 378 345 41 0 chr13 81939257 81939275 -38345037 + ID_B1 SINE B4 127 214 -10 6 1210 404 261 0 0 chr13 81940357 81940447 -38343865 - ID4_ SINE ID -55 97 8 6 1210 21 0 0 0 chr13 81940994 81941015 -38343297 + AT_rich Low_complexity Low_complexity 1 21 0 6 1210 341 333 52 5 chr13 81942393 81942586 -38341726 + HAL1 LINE L1 152 353 -2154 6 1210 297 0 0 0 chr13 81942746 81942779 -38341533 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1210 369 0 0 0 chr13 81944093 81944134 -38340178 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1210 411 248 59 0 chr13 81944186 81944287 -38340025 - PB1D10 SINE Alu -7 110 4 6 1210 400 315 78 97 chr13 81944328 81944739 -38339573 + HAL1 LINE L1 1796 2198 -309 6 1210 29 47 0 0 chr13 81945034 81945077 -38339235 + AT_rich Low_complexity Low_complexity 1 43 0 6 1210 289 304 32 0 chr13 81945081 81945206 -38339106 + L1MA4 LINE L1 5801 5929 -371 6 1210 315 311 106 8 chr13 81945346 81945469 -38338843 + B1_Mur1 SINE Alu 2 136 -13 6 1210 1324 86 11 21 chr13 81945603 81945794 -38338518 - B2_Mm1t SINE B2 -4 189 1 6 1210 2740 30 48 0 chr13 81945956 81946286 -38338026 - ORR1A0 LTR MaLR 0 346 1 6 1210 7361 110 2 6 chr13 81946499 81947949 -38336363 + Lx2 LINE L1 5245 6691 -306 6 1210 1040 39 26 13 chr13 81948144 81948335 -38335977 - L1_Mus3 LINE L1 0 6638 6479 6 1210 365 83 0 48 chr13 81948335 81948362 -38335950 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1210 23 33 0 0 chr13 81948420 81948450 -38335862 + AT_rich Low_complexity Low_complexity 1 30 0 6 1210 675 270 14 91 chr13 81949778 81949848 -38334464 + B3A SINE B2 1 62 -136 6 1210 2155 89 92 0 chr13 81949848 81950173 -38334139 - IAPEY2_LTR LTR ERVK -2 355 1 6 1210 675 270 14 91 chr13 81950173 81950310 -38334002 + B3A SINE B2 63 192 -6 6 1210 685 259 68 6 chr13 81950458 81950621 -38333691 - B3 SINE B2 -9 207 35 6 1210 296 253 13 39 chr13 81950725 81950803 -38333509 - ID4 SINE ID -6 77 2 6 1210 536 196 19 38 chr13 81951189 81951295 -38333017 + B1F2 SINE Alu 46 149 0 6 1210 193 0 29 59 chr13 81951317 81951351 -38332961 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 6 1210 24 32 0 0 chr13 81951811 81951842 -38332470 + AT_rich Low_complexity Low_complexity 1 31 0 6 1210 567 226 14 63 chr13 81951956 81952098 -38332214 - B1F2 SINE Alu -14 135 1 6 1210 459 52 0 0 chr13 81952468 81952526 -38331786 + (GGA)n Simple_repeat Simple_repeat 3 60 0 6 1210 189 0 0 0 chr13 81952527 81952548 -38331764 + (CAG)n Simple_repeat Simple_repeat 2 22 0 6 1210 368 304 109 23 chr13 81952856 81952984 -38331328 + RSINE1 SINE B4 3 141 -24 6 1210 636 81 0 0 chr13 81952987 81953074 -38331238 + (CA)n Simple_repeat Simple_repeat 2 88 0 6 1210 433 331 126 31 chr13 81953757 81953786 -38330526 + L2 LINE L2 952 979 -2440 6 1210 7105 27 5 0 chr13 81953786 81954604 -38329708 + RLTR13B2 LTR ERVK 1 822 0 6 1210 433 331 126 31 chr13 81954604 81954932 -38329380 + L2 LINE L2 980 1343 -2076 6 1210 25 31 0 0 chr13 81955231 81955263 -38329049 + AT_rich Low_complexity Low_complexity 1 32 0 6 1210 996 39 0 0 chr13 81955313 81955440 -38328872 - B1_Mus1 SINE Alu -21 127 1 6 1210 1109 62 7 0 chr13 81956363 81956508 -38327804 - B1_Mm SINE Alu 0 147 2 6 1210 743 277 11 6 chr13 81956891 81957069 -38327243 + B3A SINE B2 2 180 -18 6 1210 360 0 0 0 chr13 81957070 81957110 -38327202 + (TAAAA)n Simple_repeat Simple_repeat 5 44 0 6 1210 22466 42 0 0 chr13 81957217 81960107 -38324205 + L1Md_F3 LINE L1 2697 5586 -297 6 1210 7982 45 4 0 chr13 81960107 81961087 -38323225 + L1Md_F3 LINE L1 5587 6570 -14 6 1210 250 262 48 48 chr13 81961600 81961684 -38322628 + B1F2 SINE Alu 46 129 -20 6 1210 460 214 93 60 chr13 81962005 81962152 -38322160 - B1_Mur2 SINE Alu 0 149 4 6 1210 23 33 0 0 chr13 81962211 81962241 -38322071 + AT_rich Low_complexity Low_complexity 1 30 0 6 1210 411 175 86 99 chr13 81962756 81962908 -38321404 + MER110A LTR ERV1 20 169 -299 6 1210 342 250 50 0 chr13 81962960 81963040 -38321272 - B1F2 SINE Alu -64 85 2 6 1210 231 250 145 53 chr13 81963140 81963271 -38321041 + MER110A LTR ERV1 323 465 -26 6 1210 193 269 19 0 chr13 81963909 81963961 -38320351 - MIRb SINE MIR -52 216 164 6 1210 334 307 26 4 chr13 81965644 81965774 -38318538 + PB1D10 SINE Alu 1 137 -12 6 1210 1163 296 68 22 chr13 81965862 81966277 -38318035 - Lx6 LINE L1 -82 7378 6945 6 1210 326 229 0 35 chr13 81966313 81966399 -38317913 - Lx5 LINE L1 -695 6355 6273 6 1210 552 68 0 0 chr13 81966415 81966488 -38317824 + (GA)n Simple_repeat Simple_repeat 1 73 0 6 1210 273 119 0 0 chr13 81966777 81966819 -38317493 - 5S rRNA rRNA -79 42 1 6 1210 597 28 0 0 chr13 81968222 81968293 -38316019 + (CAAG)n Simple_repeat Simple_repeat 1 71 0 6 1210 1023 88 0 0 chr13 81968779 81968915 -38315397 - B1_Mus1 SINE Alu -11 137 2 6 1210 590 276 19 19 chr13 81970116 81970275 -38314037 - RSINE1 SINE B4 0 165 7 6 1210 25 31 0 0 chr13 81970373 81970405 -38313907 + AT_rich Low_complexity Low_complexity 1 32 0 6 1210 303 93 0 0 chr13 81970842 81970885 -38313427 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1210 1493 99 0 39 chr13 81971400 81971632 -38312680 - Lx2 LINE L1 0 6997 6775 6 1210 4915 112 16 4 chr13 81971632 81972405 -38311907 - Lx2 LINE L1 -354 6643 5862 6 1210 1141 135 60 0 chr13 81972418 81972603 -38311709 - ORR1A2 LTR MaLR -51 276 81 7 1210 1096 72 0 0 chr13 81972603 81972756 -38311556 - Lx2 LINE L1 -1122 5875 5723 6 1210 8491 72 16 5 chr13 81972753 81974025 -38310287 - MusHAL1 LINE L1 -1425 1287 1 7 1210 2414 146 29 4 chr13 81974018 81974472 -38309840 - L1VL4 LINE L1 -5513 789 325 7 1210 740 280 11 0 chr13 81974472 81974654 -38309658 - B3 SINE B2 -31 185 2 7 1210 428 289 105 48 chr13 81974655 81974751 -38309561 - L1MEg LINE L1 -5152 932 848 7 1210 1166 124 51 0 chr13 81974751 81974929 -38309383 - B2_Mm2 SINE B2 -7 188 2 7 1210 428 289 105 48 chr13 81974929 81975231 -38309081 - L1MEg LINE L1 -5237 847 511 7 1210 213 200 0 0 chr13 81975868 81975913 -38308399 + C-rich Low_complexity Low_complexity 1 45 0 7 1210 2249 176 53 84 chr13 81976956 81977502 -38306810 + RLTR24 LTR ERV1 1 529 0 7 1210 234 0 0 0 chr13 81977779 81977805 -38306507 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 7 1210 315 0 0 0 chr13 81977847 81977882 -38306430 + (TC)n Simple_repeat Simple_repeat 2 36 0 7 1210 432 0 0 0 chr13 81980308 81980356 -38303956 + (TCTCTG)n Simple_repeat Simple_repeat 6 53 0 7 1210 497 345 90 54 chr13 81980356 81980635 -38303677 - B4 SINE B4 -1 291 3 7 1210 234 292 109 67 chr13 81980951 81981116 -38303196 + RMER2 LTR ERV1 367 538 -29 7 1210 25392 132 22 14 chr13 81983119 81988407 -38295905 - L1_Mus3 LINE L1 -706 5932 611 7 1210 635 171 27 0 chr13 81988474 81988585 -38295727 - B1_Mus1 SINE Alu 0 148 35 7 1210 377 314 80 0 chr13 81988768 81988905 -38295407 + B3A SINE B2 1 148 -50 7 1210 401 0 20 0 chr13 81988924 81988973 -38295339 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 1210 638 251 53 27 chr13 81989012 81989200 -38295112 + B3A SINE B2 5 197 -1 7 1210 21 0 0 0 chr13 81989832 81989853 -38294459 + AT_rich Low_complexity Low_complexity 1 21 0 7 1210 263 173 49 0 chr13 81990486 81990567 -38293745 + CT-rich Low_complexity Low_complexity 1 85 0 7 1210 233 299 96 15 chr13 81990579 81990776 -38293536 + RMER10A LTR ERVL 214 426 -16 7 1210 1331 93 16 0 chr13 81991014 81991197 -38293115 + B2_Mm2 SINE B2 2 187 -8 7 1210 22 0 0 0 chr13 81991236 81991258 -38293054 + AT_rich Low_complexity Low_complexity 1 22 0 7 1210 239 346 90 69 chr13 81991316 81991648 -38292664 - L2c LINE L2 -1 3386 3048 7 1210 21 71 0 0 chr13 81992241 81992283 -38292029 + AT_rich Low_complexity Low_complexity 1 42 0 7 1210 432 55 0 0 chr13 81992296 81992351 -38291961 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1210 318 293 0 26 chr13 81992357 81992434 -38291878 - RSINE1 SINE B4 -47 118 44 7 1210 623 255 77 62 chr13 81992452 81992841 -38291471 - L1MA7 LINE L1 0 6291 5897 7 1210 225 0 0 0 chr13 81992917 81992942 -38291370 + (CCTAT)n Simple_repeat Simple_repeat 3 27 0 7 1210 219 114 22 22 chr13 81994896 81994941 -38289371 + A-rich Low_complexity Low_complexity 3 47 0 7 1210 1119 269 67 41 chr13 81995758 81996146 -38288166 + RMER5 LTR ERV1 53 450 -84 7 1210 1213 231 133 27 chr13 81996157 81996669 -38287643 + L1_Rod LINE L1 5045 5610 -237 7 1210 2055 275 38 34 chr13 81996653 81997451 -38286861 + Lx9 LINE L1 6673 7473 -171 7 1210 22 0 0 0 chr13 81997657 81997679 -38286633 + AT_rich Low_complexity Low_complexity 1 22 0 7 1210 1830 220 95 7 chr13 81998221 81998674 -38285638 - RLTR16 LTR ERVK -12 493 1 7 1210 182 316 26 26 chr13 81998855 81998933 -38285379 + MIRb SINE MIR 93 170 -98 7 1210 833 180 6 0 chr13 82000206 82000373 -38283939 + (TA)n Simple_repeat Simple_repeat 2 169 0 1 1210 790 364 47 27 chr13 82000471 82000872 -38283440 + MER21B LTR ERV1 158 566 -297 2 1210 415 338 107 67 chr13 82001149 82001447 -38282865 + MLT1A0 LTR MaLR 53 362 -3 3 1210 551 250 46 15 chr13 82001775 82001905 -38282407 - ID_B1 SINE B4 -4 220 87 4 1210 207 0 0 0 chr13 82001992 82002015 -38282297 + (TAA)n Simple_repeat Simple_repeat 2 24 0 5 1210 401 270 40 93 chr13 82002537 82002688 -38281624 - RMER2 LTR ERV1 -212 355 213 6 1210 1938 191 35 19 chr13 82003349 82003723 -38280589 - RLTR14 LTR ERV1 0 382 3 7 1210 344 156 56 4 chr13 82003821 82003919 -38280393 + L1MC LINE L1 3852 3947 -1939 8 1210 247 306 47 37 chr13 82004042 82004160 -38280152 + L1MC LINE L1 4041 4165 -1981 8 1210 516 278 60 45 chr13 82004222 82004422 -38279890 + B4 SINE B4 3 205 -87 9 1210 558 109 0 0 chr13 82004561 82004662 -38279650 + (CA)n Simple_repeat Simple_repeat 2 102 0 1 1210 246 253 0 0 chr13 82004991 82005074 -38279238 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 1210 690 75 0 0 chr13 82005563 82005656 -38278656 + (TA)n Simple_repeat Simple_repeat 2 94 0 1 1210 312 27 0 0 chr13 82005656 82005692 -38278620 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1210 222 37 0 0 chr13 82005698 82005725 -38278587 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1 1210 1707 208 168 92 chr13 82006097 82006663 -38277649 + RMER19C LTR ERVK 1 609 -2 1 1210 513 0 0 0 chr13 82006821 82006878 -38277434 + (CAAG)n Simple_repeat Simple_repeat 1 57 0 1 1210 222 333 28 0 chr13 82007368 82007440 -38276872 - B3A SINE B2 -124 74 1 1 1210 804 161 8 1 chr13 82007518 82007655 -38276657 + B1_Mur3 SINE Alu 4 139 -9 1 1210 217 71 0 0 chr13 82007965 82007993 -38276319 - B3 SINE B2 -184 32 5 1 1210 380 136 39 16 chr13 82008348 82008475 -38275837 + Lx LINE L1 6518 6647 -7 2 1210 24 0 0 0 chr13 82011149 82011173 -38273139 + AT_rich Low_complexity Low_complexity 1 24 0 2 1210 24 0 0 0 chr13 82011179 82011203 -38273109 + AT_rich Low_complexity Low_complexity 1 24 0 2 1210 1623 189 10 100 chr13 82011724 82012135 -38272177 + ORR1D1 LTR MaLR 1 374 0 2 1210 31 44 0 0 chr13 82013228 82013273 -38271039 + AT_rich Low_complexity Low_complexity 1 45 0 2 1210 270 206 176 0 chr13 82014254 82014322 -38269990 - B4A SINE B4 -212 80 1 2 1210 689 281 51 75 chr13 82014948 82015240 -38269072 + B4A SINE B4 2 286 -6 2 1210 1141 252 7 7 chr13 82015400 82015676 -38268636 - Lx9 LINE L1 -1060 6584 6309 2 1210 3933 201 54 60 chr13 82015684 82016748 -38267564 + Lx9 LINE L1 6587 7643 -1 2 1210 7354 84 10 3 chr13 82017689 82019383 -38264929 - L1_Mus3 LINE L1 0 6638 4961 2 1210 308 261 0 3 chr13 82019384 82019469 -38264843 + L1_Mur3 LINE L1 4017 4133 -2013 2 1210 234 172 17 33 chr13 82019471 82019531 -38264781 + CT-rich Low_complexity Low_complexity 2 60 0 3 1210 313 287 0 82 chr13 82019534 82019644 -38264668 - MT2B LTR ERVL -305 296 196 3 1210 589 93 0 0 chr13 82019559 82019645 -38264667 - B1_Mus2 SINE Alu -24 123 38 3 1210 238 237 77 26 chr13 82019578 82019656 -38264656 - RLTR25B LTR ERVK -519 509 428 3 1210 21 71 0 0 chr13 82019656 82019698 -38264614 + AT_rich Low_complexity Low_complexity 1 42 0 3 1210 244 197 79 0 chr13 82019867 82019943 -38264369 - Lx7 LINE L1 -221 7475 7394 3 1210 3612 202 29 14 chr13 82020200 82020986 -38263326 - Lx6 LINE L1 -417 7043 6246 3 1210 744 272 41 0 chr13 82020992 82021187 -38263125 + Lx6 LINE L1 7060 7262 -198 3 1210 347 105 0 17 chr13 82021200 82021258 -38263054 + (GAAA)n Simple_repeat Simple_repeat 4 60 0 3 1210 324 0 0 0 chr13 82021335 82021371 -38262941 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1210 455 48 16 0 chr13 82021375 82021437 -38262875 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 3 1210 391 233 88 33 chr13 82021443 82021625 -38262687 + L1M2 LINE L1 4363 4554 -1589 4 1210 317 281 160 68 chr13 82021673 82021879 -38262433 - RMER15 LTR ERVL -76 499 275 4 1210 311 232 58 48 chr13 82021888 82021992 -38262320 - RMER15 LTR ERVL -416 159 55 4 1210 313 333 44 24 chr13 82022135 82022387 -38261925 + L1M2 LINE L1 4615 4871 -1272 4 1210 216 78 19 56 chr13 82022394 82022448 -38261864 + A-rich Low_complexity Low_complexity 2 53 0 4 1210 382 355 43 19 chr13 82022621 82022828 -38261484 + L1M2 LINE L1 5109 5320 -823 4 1210 514 270 36 36 chr13 82023117 82023336 -38260976 + L1M2 LINE L1 5571 5789 -502 4 1210 219 141 31 15 chr13 82023355 82023420 -38260892 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1210 1954 216 27 22 chr13 82023423 82023831 -38260481 - MTD LTR MaLR -9 410 1 4 1210 1056 263 4 12 chr13 82023834 82024084 -38260228 - MTD LTR MaLR -171 248 1 4 1210 402 135 9 19 chr13 82024084 82024190 -38260122 + (CA)n Simple_repeat Simple_repeat 2 106 0 4 1210 297 159 0 0 chr13 82024191 82024254 -38260058 + GA-rich Low_complexity Low_complexity 2 64 0 4 1210 746 264 61 32 chr13 82026388 82026470 -38257842 - ORR1C2 LTR MaLR 0 384 306 4 1210 2916 68 13 2 chr13 82026470 82026866 -38257446 + MTB LTR MaLR 1 400 0 4 1210 746 231 58 27 chr13 82026866 82027114 -38257198 - ORR1C2 LTR MaLR -78 316 3 4 1210 5226 63 6 0 chr13 82027611 82028277 -38256035 - L1_Mus1 LINE L1 0 6567 5898 5 1210 603 74 0 0 chr13 82028365 82028446 -38255866 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 5 1210 3091 11 43 0 chr13 82029976 82030328 -38253984 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1210 53253 21 16 1 chr13 82030328 82036706 -38247606 + IAPEz-int LTR ERVK 8 6481 0 5 1210 3091 11 43 0 chr13 82036706 82037058 -38247254 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1210 575 233 2 17 chr13 82037058 82037219 -38247093 + L1_Mur2 LINE L1 5425 5612 -628 5 1210 1719 181 95 179 chr13 82037657 82038216 -38246096 + RMER19C LTR ERVK 1 512 -99 5 1210 23828 92 15 6 chr13 82038227 82040076 -38244236 - L1_Mus3 LINE L1 -11 6627 4737 5 1210 756 33 0 0 chr13 82040076 82040167 -38244145 + (TCCC)n Simple_repeat Simple_repeat 3 93 0 5 1210 792 0 0 0 chr13 82040169 82040257 -38244055 + (TTTC)n Simple_repeat Simple_repeat 4 91 0 5 1210 23828 123 20 10 chr13 82040257 82043201 -38241111 - L1_Mus3 LINE L1 -1147 4736 1785 5 1210 6849 86 9 8 chr13 82043580 82044742 -38239570 + L1_Mus1 LINE L1 5426 6567 0 5 1210 5129 137 16 68 chr13 82045335 82046891 -38237421 - L1VL4 LINE L1 -1795 1764 293 5 1210 613 180 18 0 chr13 82046893 82047004 -38237308 + RMER19C LTR ERVK 487 599 -12 5 1210 565 327 34 61 chr13 82047264 82047560 -38236752 - B4A SINE B4 -4 288 1 6 1210 674 260 0 0 chr13 82048479 82048625 -38235687 + B1F SINE Alu 1 146 -3 6 1210 646 290 71 92 chr13 82049628 82050008 -38234304 + MLT1A LTR MaLR 3 374 0 6 1210 337 338 35 0 chr13 82050101 82050299 -38234013 + L1MB8 LINE L1 5510 5714 -464 6 1210 192 152 0 0 chr13 82050306 82050339 -38233973 + T-rich Low_complexity Low_complexity 1 33 0 6 1210 267 174 0 0 chr13 82050339 82050385 -38233927 - L1M2 LINE L1 -601 5699 5654 6 1210 317 352 102 14 chr13 82050452 82050599 -38233713 - RSINE1 SINE B4 0 165 6 6 151 32397 69 10 7 chr13 82050717 82056926 -38227386 - L1Md_F2 LINE L1 0 6582 367 6 1211 735 217 0 0 chr13 82056944 82057082 -38227230 - B1_Mur2 SINE Alu -1 148 11 6 1211 269 272 0 140 chr13 82056988 82057095 -38227217 - MT2B LTR ERVL -344 257 166 6 1211 579 247 146 55 chr13 82057099 82057442 -38226870 + L1MB8 LINE L1 5704 6077 -101 6 1211 365 284 100 9 chr13 82057549 82057659 -38226653 - B1F SINE Alu 0 149 30 7 1211 349 304 39 0 chr13 82058248 82058350 -38225962 - PB1D10 SINE Alu -10 107 2 7 1211 601 356 86 52 chr13 82058797 82059238 -38225074 - MT2A LTR ERVL -68 465 10 7 1211 335 311 57 25 chr13 82060078 82060200 -38224112 - MTE2b LTR MaLR -49 330 205 7 1211 331 229 17 11 chr13 82060423 82060600 -38223712 + GA-rich Low_complexity Low_complexity 2 179 0 7 1211 30 0 0 0 chr13 82060737 82060767 -38223545 + AT_rich Low_complexity Low_complexity 1 30 0 7 1211 2491 179 48 0 chr13 82060768 82061204 -38223108 - Lx4A LINE L1 -4 7054 6598 7 1211 6848 114 40 1 chr13 82061205 82062478 -38221834 + Lx LINE L1 5285 6640 -14 7 1211 396 0 0 0 chr13 82062478 82062522 -38221790 + (TAA)n Simple_repeat Simple_repeat 2 45 0 7 1211 4704 149 47 2 chr13 82062522 82063335 -38220977 - Lx4A LINE L1 -452 6606 5758 7 1211 4336 134 73 16 chr13 82063336 82063475 -38220837 - RMER17D2 LTR ERVK 0 809 678 7 1211 2796 67 50 5 chr13 82063475 82063852 -38220460 + MTA_Mm LTR MaLR 3 396 0 8 1211 4336 134 73 16 chr13 82063852 82064158 -38220154 - RMER17D2 LTR ERVK -132 677 327 7 1211 393 22 0 0 chr13 82064158 82064204 -38220108 + (GGAGA)n Simple_repeat Simple_repeat 1 46 0 8 1211 4336 134 73 16 chr13 82064204 82064522 -38219790 - RMER17D2 LTR ERVK -483 326 1 7 1211 2316 128 57 8 chr13 82064532 82064934 -38219378 - Lx4A LINE L1 -109 5768 5347 7 1211 5304 79 70 1 chr13 82065377 82066125 -38218187 + L1_Mus3 LINE L1 5840 6638 0 8 1211 2854 181 58 2 chr13 82066789 82067228 -38217084 + RLTR20B2 LTR ERVK 1 452 -108 8 1211 384 22 0 0 chr13 82067228 82067273 -38217039 + (TC)n Simple_repeat Simple_repeat 1 45 0 8 1211 2854 181 58 2 chr13 82067273 82067363 -38216949 + RLTR20B2 LTR ERVK 453 558 -2 8 1211 227 355 65 65 chr13 82067542 82067741 -38216571 - MIRb SINE MIR -14 254 56 8 1211 228 111 0 0 chr13 82067800 82067836 -38216476 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 1211 23 0 0 0 chr13 82068675 82068698 -38215614 + AT_rich Low_complexity Low_complexity 1 23 0 8 1211 21 0 0 0 chr13 82068828 82068849 -38215463 + AT_rich Low_complexity Low_complexity 1 21 0 8 1211 605 148 129 0 chr13 82069218 82069319 -38214993 + B1_Mus2 SINE Alu 19 132 -15 8 1211 510 170 0 0 chr13 82070829 82070923 -38213389 + T-rich Low_complexity Low_complexity 1 94 0 9 1211 767 201 4 4 chr13 82070928 82071153 -38213159 + CT-rich Low_complexity Low_complexity 1 225 0 9 1211 385 260 130 52 chr13 82071322 82071630 -38212682 - L1MB5 LINE L1 -216 5958 5627 9 1211 604 349 35 15 chr13 82071631 82071829 -38212483 + B3 SINE B2 14 215 -1 9 1211 1129 255 38 33 chr13 82071829 82072226 -38212086 + Lx7 LINE L1 6774 7172 -524 9 1211 872 181 0 0 chr13 82072684 82072822 -38211490 - B1_Mus2 SINE Alu -3 144 7 9 1211 21 0 0 0 chr13 82073595 82073616 -38210696 + AT_rich Low_complexity Low_complexity 1 21 0 9 1211 24 0 0 0 chr13 82075924 82075948 -38208364 + AT_rich Low_complexity Low_complexity 1 24 0 9 1211 22 0 0 0 chr13 82076784 82076806 -38207506 + AT_rich Low_complexity Low_complexity 1 22 0 9 1211 216 0 0 0 chr13 82078747 82078771 -38205541 + (TTAA)n Simple_repeat Simple_repeat 4 27 0 9 1211 1607 37 5 0 chr13 82079114 82079303 -38205009 - B2_Mm1a SINE B2 -3 190 1 1 1211 2127 200 35 80 chr13 82079647 82080197 -38204115 + RLTR11A2 LTR ERVK 1 525 -2 1 1211 232 158 0 34 chr13 82080676 82080735 -38203577 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1211 366 292 90 23 chr13 82081378 82081511 -38202801 + MER5A DNA MER1_type 42 183 -6 1 1211 231 362 97 13 chr13 82081521 82081675 -38202637 + MIR3 SINE MIR 42 208 0 1 1211 519 112 0 0 chr13 82082308 82082388 -38201924 + (TA)n Simple_repeat Simple_repeat 2 81 0 1 1211 276 30 0 0 chr13 82085887 82085920 -38198392 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1211 195 129 0 0 chr13 82086201 82086232 -38198080 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1 1211 243 284 0 0 chr13 82086288 82086404 -38197908 + (TA)n Simple_repeat Simple_repeat 1 116 0 1 1211 369 43 0 0 chr13 82086870 82086917 -38197395 + (T)n Simple_repeat Simple_repeat 1 47 0 1 1211 684 36 0 0 chr13 82087236 82087319 -38196993 + (TTTCC)n Simple_repeat Simple_repeat 4 86 0 1 1211 360 0 0 0 chr13 82087313 82087353 -38196959 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1 1211 543 226 83 0 chr13 82087353 82087486 -38196826 - B1_Mur2 SINE Alu -5 144 1 1 1211 22 35 0 0 chr13 82087572 82087601 -38196711 + AT_rich Low_complexity Low_complexity 1 29 0 1 1211 1394 293 104 20 chr13 82087661 82088296 -38196016 - Lx8 LINE L1 -33 7440 6753 1 1211 1155 322 46 8 chr13 82088355 82088859 -38195453 + Lx8 LINE L1 6709 7231 -242 1 1211 834 124 20 0 chr13 82089035 82089188 -38195124 + (TCTA)n Simple_repeat Simple_repeat 2 157 0 1 1211 21 71 0 0 chr13 82089596 82089638 -38194674 + AT_rich Low_complexity Low_complexity 1 42 0 1 1211 283 298 101 48 chr13 82089729 82090023 -38194289 - L1MA6 LINE L1 -198 6093 5788 1 1211 238 305 75 41 chr13 82090139 82090270 -38194042 - L1MA6 LINE L1 -671 5629 5497 1 1211 318 191 44 0 chr13 82090270 82090338 -38193974 - ID4_ SINE ID -10 73 3 1 1211 268 283 95 14 chr13 82090338 82090608 -38193704 - L1MA6 LINE L1 -804 5496 5203 1 1211 2155 237 34 82 chr13 82090608 82091232 -38193080 - RMER19C LTR ERVK -17 594 1 1 1211 33 43 0 0 chr13 82091304 82091351 -38192961 + AT_rich Low_complexity Low_complexity 1 47 0 1 1211 904 82 0 214 chr13 82091352 82091539 -38192773 - B1_Mus1 SINE Alu -1 147 1 1 1211 1113 84 0 0 chr13 82091552 82091695 -38192617 - B1_Mus1 SINE Alu -5 143 1 1 1211 449 127 0 12 chr13 82091791 82091871 -38192441 + (TATG)n Simple_repeat Simple_repeat 2 80 0 1 1211 258 236 14 27 chr13 82091997 82092071 -38192241 - B1F SINE Alu -74 75 3 1 1211 511 277 24 37 chr13 82092071 82092348 -38191964 - L1MA6 LINE L1 -1187 4959 4680 1 1211 863 281 121 25 chr13 82092492 82093181 -38191131 - L1MA6 LINE L1 -1709 4434 3680 1 1211 414 0 0 0 chr13 82094537 82094583 -38189729 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1211 216 0 0 0 chr13 82094583 82094606 -38189706 + (GA)n Simple_repeat Simple_repeat 1 24 0 1 1211 255 362 94 9 chr13 82095857 82095963 -38188349 - PB1D9 SINE Alu -5 115 1 1 1211 22 80 0 0 chr13 82097252 82097302 -38187010 + AT_rich Low_complexity Low_complexity 1 50 0 1 1211 5708 76 29 24 chr13 82098971 82099775 -38184537 + RLTR13C2 LTR ERVK 1 808 0 1 1211 290 343 20 0 chr13 82100923 82101022 -38183290 + ID_B1 SINE B4 107 207 -17 1 1211 201 156 0 0 chr13 82101058 82101090 -38183222 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1 1211 319 335 106 35 chr13 82101368 82101538 -38182774 + MER3 DNA MER1_type 14 195 -14 1 1211 461 291 89 0 chr13 82101658 82101816 -38182496 + Tigger8 DNA MER2_type 228 399 -267 1 1211 28 48 0 0 chr13 82101854 82101896 -38182416 + AT_rich Low_complexity Low_complexity 1 42 0 1 1211 21 36 0 0 chr13 82101966 82101994 -38182318 + AT_rich Low_complexity Low_complexity 1 28 0 1 1211 562 252 47 13 chr13 82103162 82103316 -38180996 - MTD LTR MaLR -15 404 239 1 1211 401 333 51 31 chr13 82103470 82103665 -38180647 - MTD LTR MaLR -201 199 1 1 1211 672 48 0 0 chr13 82103859 82103943 -38180369 + (TCCC)n Simple_repeat Simple_repeat 4 87 0 1 1211 507 33 0 0 chr13 82104416 82104477 -38179835 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 1211 1314 115 0 5 chr13 82104824 82105017 -38179295 + B2_Mm2 SINE B2 2 193 -2 1 1211 360 0 0 0 chr13 82105228 82105268 -38179044 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1211 259 333 54 31 chr13 82105761 82105891 -38178421 + L2a LINE L2 3294 3426 0 1 1211 7559 72 11 35 chr13 82106519 82107649 -38176663 + L1_Mur1 LINE L1 4643 5745 -141 1 1211 2145 62 28 0 chr13 82107646 82107935 -38176377 - L1_Mus2 LINE L1 -469 6097 5801 1 1211 2510 65 8 246 chr13 82107924 82108554 -38175758 + L1_Mus2 LINE L1 6087 6566 0 1 1211 8415 91 9 22 chr13 82108561 82109852 -38174460 + Lx3_Mus LINE L1 5728 7001 -8 1 1211 279 93 0 0 chr13 82111727 82111770 -38172542 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1 1211 200 40 0 0 chr13 82111770 82111795 -38172517 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1 1211 26 0 0 0 chr13 82112482 82112508 -38171804 + AT_rich Low_complexity Low_complexity 1 26 0 1 1211 1079 62 14 0 chr13 82112508 82112653 -38171659 - B1_Mm SINE Alu 0 147 1 1 1211 408 236 152 16 chr13 82113247 82113372 -38170940 + B1F2 SINE Alu 5 146 -3 1 1211 322 273 40 0 chr13 82113480 82113630 -38170682 + (TA)n Simple_repeat Simple_repeat 2 157 0 1 1211 803 290 82 0 chr13 82113932 82114201 -38170111 - B4 SINE B4 0 292 2 1 1211 261 0 0 0 chr13 82114257 82114286 -38170026 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1211 222 240 0 0 chr13 82114302 82114352 -38169960 - RSINE1 SINE B4 -38 127 78 1 1211 228 35 0 0 chr13 82114889 82114918 -38169394 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1211 28 0 0 0 chr13 82115236 82115264 -38169048 + AT_rich Low_complexity Low_complexity 1 28 0 1 1211 211 313 0 50 chr13 82115942 82116063 -38168249 + GA-rich Low_complexity Low_complexity 3 117 0 1 1211 393 22 0 0 chr13 82116715 82116761 -38167551 + (TC)n Simple_repeat Simple_repeat 2 47 0 1 1211 342 0 0 0 chr13 82116761 82116798 -38167514 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1211 956 338 18 4 chr13 82116812 82117085 -38167227 - B4A SINE B4 -2 290 14 1 1211 467 328 145 90 chr13 82117393 82118116 -38166196 + LTR41 LTR ERVL 4 766 -2 1 1211 251 145 28 28 chr13 82118263 82118334 -38165978 + G-rich Low_complexity Low_complexity 1 71 0 1 1211 327 267 89 0 chr13 82118336 82118437 -38165875 + HAL1-3A_ME LINE L1 2284 2393 -465 1 1211 286 359 83 19 chr13 82118456 82118564 -38165748 - LTR16E2 LTR ERVL -413 155 41 1 1211 557 244 60 7 chr13 82119259 82119435 -38164877 + MIR SINE MIR 11 204 -64 1 1211 477 0 0 0 chr13 82119802 82119855 -38164457 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1211 6997 99 19 10 chr13 82120179 82121520 -38162792 - L1_Mus3 LINE L1 -1 6637 5296 1 1211 3203 121 35 22 chr13 82121520 82122532 -38161780 + RMER17D LTR ERVK 1 889 0 1 1211 7185 138 5 16 chr13 82122536 82123797 -38160515 - L1_Mus3 LINE L1 -585 5298 4052 1 1211 36823 38 2 1 chr13 82123800 82129976 -38154336 - L1Md_T LINE L1 -1 6581 398 1 1211 9101 156 16 23 chr13 82129975 82131832 -38152480 - L1_Mus3 LINE L1 -1816 4067 2224 1 1211 21 0 0 0 chr13 82132694 82132715 -38151597 + AT_rich Low_complexity Low_complexity 1 21 0 1 1211 230 309 82 0 chr13 82133369 82133466 -38150846 - MIRc SINE MIR -113 155 51 1 1211 35 0 0 0 chr13 82133598 82133633 -38150679 + AT_rich Low_complexity Low_complexity 1 35 0 1 1211 1491 67 38 5 chr13 82133683 82133893 -38150419 - L1Md_F2 LINE L1 0 6582 6366 1 1211 271 289 0 13 chr13 82134086 82134163 -38150149 + CT-rich Low_complexity Low_complexity 1 76 0 1 1211 656 221 164 11 chr13 82134227 82134410 -38149902 - B3 SINE B2 -5 211 1 1 1211 528 271 33 17 chr13 82134467 82134587 -38149725 + B1F SINE Alu 15 136 -13 1 1211 710 293 88 12 chr13 82134644 82134986 -38149326 - L1MB3 LINE L1 -132 6287 5920 1 1211 1024 189 186 151 chr13 82134986 82135304 -38149008 - ORR1B1 LTR MaLR 0 329 1 1 1211 367 280 27 34 chr13 82135333 82135519 -38148793 + L1_Rod LINE L1 3486 3666 -2477 1 1211 235 288 45 7 chr13 82135710 82135864 -38148448 - L1MB3 LINE L1 -691 5725 5566 1 1211 226 354 12 47 chr13 82135881 82135967 -38148345 - ID4_ SINE ID 0 83 1 1 1211 311 302 124 52 chr13 82135972 82136486 -38147826 - L1MB3 LINE L1 -820 5562 5012 1 1211 671 0 13 0 chr13 82136696 82136775 -38147537 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 1 1211 416 99 14 0 chr13 82136775 82136846 -38147466 - L1_Mus2 LINE L1 -1 6565 6494 1 1211 331 231 157 0 chr13 82136846 82136954 -38147358 - L1MB3 LINE L1 -5717 667 543 1 1211 317 345 44 22 chr13 82136968 82137149 -38147163 - L1MB3 LINE L1 -6176 208 24 1 1211 401 252 0 45 chr13 82137181 82137314 -38146998 - RMER10B LTR ERVL -46 352 226 1 1211 275 85 0 21 chr13 82137556 82137604 -38146708 + (CAAAG)n Simple_repeat Simple_repeat 3 49 0 1 1211 210 191 0 0 chr13 82138849 82138896 -38145416 + (CCA)n Simple_repeat Simple_repeat 1 47 0 1 1211 212 235 88 0 chr13 82139215 82139283 -38145029 - MIR SINE MIR -67 141 68 1 1211 1349 237 92 80 chr13 82140252 82140665 -38143647 - MTD LTR MaLR -1 418 1 1 1211 1206 178 14 0 chr13 82141232 82141445 -38142867 - B3 SINE B2 0 216 1 1 1211 258 304 0 28 chr13 82142015 82142086 -38142226 - ID4_ SINE ID 0 83 15 1 1211 22 0 0 0 chr13 82143894 82143916 -38140396 + AT_rich Low_complexity Low_complexity 1 22 0 1 1211 1242 304 85 8 chr13 82147109 82147521 -38136791 + Lx8 LINE L1 5361 5782 -518 1 1211 219 69 0 0 chr13 82147521 82147550 -38136762 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 1211 1242 307 67 62 chr13 82147550 82147960 -38136352 + Lx8 LINE L1 5753 6178 -1295 1 1211 640 235 90 5 chr13 82147960 82148148 -38136164 + B3 SINE B2 1 204 -12 1 1211 1242 307 67 62 chr13 82148148 82148577 -38135735 + Lx8 LINE L1 6179 6591 -882 1 1211 4846 194 39 22 chr13 82148579 82149514 -38134798 - Lx9 LINE L1 -287 7357 6404 1 1211 356 0 0 22 chr13 82149514 82149559 -38134753 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1211 4846 194 39 22 chr13 82149559 82149670 -38134642 - Lx9 LINE L1 -1241 6403 6294 1 1211 259 278 43 9 chr13 82149784 82149900 -38134412 + GA-rich Low_complexity Low_complexity 1 120 0 1 1211 483 345 14 0 chr13 82150036 82150181 -38134131 + B1F SINE Alu 1 147 -2 1 1211 255 366 90 67 chr13 82150191 82150446 -38133866 + B4A SINE B4 6 266 -26 1 1211 23 0 0 0 chr13 82150998 82151021 -38133291 + AT_rich Low_complexity Low_complexity 1 23 0 1 1211 22 0 0 0 chr13 82151032 82151054 -38133258 + AT_rich Low_complexity Low_complexity 1 22 0 2 1211 610 299 126 24 chr13 82151069 82151738 -38132574 + L1MD LINE L1 4429 5165 -981 2 1211 9806 189 58 45 chr13 82151744 82154885 -38129427 + L1_Mur3 LINE L1 779 3964 -1916 2 1211 2676 220 25 31 chr13 82154866 82155536 -38128776 + Lx7 LINE L1 6834 7499 -197 2 1211 636 243 27 43 chr13 82155517 82155775 -38128537 + Lx7 LINE L1 7443 7696 0 2 1211 6768 123 31 0 chr13 82156040 82157772 -38126540 - L1_Mus3 LINE L1 0 6638 4859 2 1211 7039 68 12 10 chr13 82157764 82159357 -38124955 - L1Md_F2 LINE L1 0 6582 4987 2 1211 32870 49 6 5 chr13 82159354 82161069 -38123243 - L1Md_T LINE L1 0 6582 4877 2 1211 4555 14 2 0 chr13 82161069 82161583 -38122729 + L1Md_A LINE L1 6068 6582 0 2 1211 32870 79 11 13 chr13 82161583 82166108 -38118204 - L1Md_T LINE L1 -1007 4876 349 2 1211 7534 149 8 24 chr13 82166106 82166647 -38117665 - L1VL4 LINE L1 -1012 4865 4338 2 1211 891 159 7 0 chr13 82166647 82166792 -38117520 - B1_Mus1 SINE Alu -1 147 2 2 1211 12876 149 8 24 chr13 82166792 82167698 -38116614 - L1VL4 LINE L1 -1540 4337 3440 2 1211 3107 67 2 12 chr13 82167697 82168106 -38116206 - L1_Mus2 LINE L1 0 6566 6162 2 1211 13301 146 7 75 chr13 82168106 82169371 -38114941 - L1VL4 LINE L1 -454 3460 2762 2 1211 216 86 0 0 chr13 82169371 82169406 -38114906 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1211 1147 65 0 0 chr13 82169406 82169544 -38114768 - B1_Mus2 SINE Alu -9 138 1 2 1211 13301 129 7 13 chr13 82169544 82171621 -38112691 - L1VL4 LINE L1 -1150 2764 493 2 1211 1637 169 0 4 chr13 82171768 82172047 -38112265 + Lx4A LINE L1 6770 7047 -11 2 1211 207 0 0 0 chr13 82172047 82172070 -38112242 + (ATG)n Simple_repeat Simple_repeat 2 24 0 2 1211 333 233 20 116 chr13 82172122 82172268 -38112044 + RLTR15 LTR ERVK 40 171 -188 2 1211 307 301 78 36 chr13 82172309 82172502 -38111810 + RLTR15 LTR ERVK 145 345 -14 2 1211 1327 199 39 18 chr13 82172518 82172799 -38111513 + MTD LTR MaLR 125 411 -8 2 1211 2454 209 63 72 chr13 82173477 82174249 -38110063 - Lx7 LINE L1 0 7696 6932 2 1211 351 245 128 0 chr13 82175835 82175929 -38108383 - RSINE1 SINE B4 -57 108 3 2 1211 405 180 0 0 chr13 82176308 82176397 -38107915 + (CA)n Simple_repeat Simple_repeat 2 90 0 2 1211 1064 116 0 0 chr13 82178358 82178505 -38105807 + B1_Mus1 SINE Alu 2 148 0 2 1211 603 174 22 7 chr13 82178507 82178646 -38105666 + GA-rich Low_complexity Low_complexity 2 142 0 2 1211 290 392 6 42 chr13 82180828 82180993 -38103319 - MIRb SINE MIR -15 253 95 2 1212 264 359 38 0 chr13 82182377 82182483 -38101829 - MIRb SINE MIR -71 197 88 2 1212 663 281 118 0 chr13 82182846 82183074 -38101238 + B4 SINE B4 1 255 -37 2 1212 761 275 14 0 chr13 82183078 82183285 -38101027 + MT2A LTR ERVL 1 210 -323 2 1212 320 105 0 34 chr13 82183285 82183344 -38100968 + (TCCC)n Simple_repeat Simple_repeat 4 60 0 2 1212 583 275 59 48 chr13 82183388 82183575 -38100737 + MT2A LTR ERVL 187 375 -158 2 1212 192 77 0 0 chr13 82184039 82184065 -38100247 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 2 1212 1419 270 13 56 chr13 82184373 82184766 -38099546 - MTE2b LTR MaLR 0 359 1 2 1212 4233 303 84 23 chr13 82184768 82186239 -38098073 - MTE2b-int LTR MaLR -2 1578 19 2 1212 1064 302 53 31 chr13 82186254 82186613 -38097699 - MTE2b LTR MaLR -12 367 1 2 1212 324 64 0 0 chr13 82186646 82186693 -38097619 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 2 1212 1428 182 31 27 chr13 82187133 82187287 -38097025 + Lx7 LINE L1 6612 6767 -929 2 1212 465 50 0 0 chr13 82187287 82187347 -38096965 + (TAAAA)n Simple_repeat Simple_repeat 2 61 0 2 1212 1428 182 31 27 chr13 82187347 82187486 -38096826 + Lx7 LINE L1 6768 6904 -792 2 1212 437 277 16 32 chr13 82187532 82187655 -38096657 - MT2B LTR ERVL -478 123 3 2 1212 2084 204 65 13 chr13 82187655 82188116 -38096196 + Lx7 LINE L1 6902 7386 -310 2 1212 306 241 95 41 chr13 82188166 82188313 -38095999 + Lx7 LINE L1 7520 7674 -22 2 1212 436 208 16 8 chr13 82188324 82188342 -38095970 + polypurine Low_complexity Low_complexity 2 19 0 2 1212 1020 90 14 14 chr13 82188342 82188489 -38095823 + B1_Mus1 SINE Alu 2 148 0 2 1212 436 208 16 8 chr13 82188489 82188596 -38095716 + GA-rich Low_complexity Low_complexity 20 128 0 2 1212 346 301 133 23 chr13 82188726 82188944 -38095368 - HAL1 LINE L1 -761 1746 1505 2 1212 353 216 8 59 chr13 82188962 82189080 -38095232 - Lx9 LINE L1 -3 7641 7530 2 1212 325 180 22 0 chr13 82189080 82189169 -38095143 + CT-rich Low_complexity Low_complexity 4 94 0 2 1212 1757 230 16 3 chr13 82189208 82189592 -38094720 - Lx9 LINE L1 -173 7471 7083 2 1212 27 0 0 0 chr13 82189722 82189749 -38094563 + AT_rich Low_complexity Low_complexity 1 27 0 2 1212 2176 240 94 83 chr13 82190243 82191765 -38092547 + RMER1B Other Other 1 1055 -11 2 1212 2930 93 29 48 chr13 82191896 82192380 -38091932 + IAPLTR2_Mm LTR ERVK 1 475 0 2 1212 189 0 0 0 chr13 82192380 82192401 -38091911 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2 1212 386 138 138 0 chr13 82193685 82193794 -38090518 - Lx9 LINE L1 -1 7643 7520 2 1212 189 74 0 0 chr13 82193797 82193824 -38090488 + (TA)n Simple_repeat Simple_repeat 2 28 0 2 1212 1126 185 64 0 chr13 82193836 82194101 -38090211 - Lx9 LINE L1 -191 7453 7172 2 1212 574 277 111 15 chr13 82194800 82194998 -38089314 - ID_B1 SINE B4 -6 218 2 2 1212 748 125 22 0 chr13 82199597 82199733 -38084579 + (TCTCC)n Simple_repeat Simple_repeat 5 143 0 2 1212 699 212 0 50 chr13 82199755 82199894 -38084418 - B1_Mur2 SINE Alu 0 149 18 2 1212 308 222 40 154 chr13 82199777 82199926 -38084386 - MT2B LTR ERVL -326 275 144 2 1212 350 230 11 17 chr13 82200427 82200608 -38083704 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1212 479 224 0 6 chr13 82200638 82200813 -38083499 + (TG)n Simple_repeat Simple_repeat 1 174 0 2 1212 4076 122 87 0 chr13 82202567 82203214 -38081098 - Lx4A LINE L1 0 7058 6356 2 1212 333 0 0 0 chr13 82203223 82203260 -38081052 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1212 1129 154 240 28 chr13 82203308 82203629 -38080683 - Lx9 LINE L1 -442 7202 6814 2 1212 578 341 0 7 chr13 82204217 82204353 -38079959 + RSINE1 SINE B4 11 145 -20 2 1212 273 75 0 0 chr13 82204356 82204396 -38079916 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1212 234 307 0 241 chr13 82204472 82204605 -38079707 + MamRep4096 DNA hAT? 325 425 -1 2 1212 333 0 0 0 chr13 82207055 82207092 -38077220 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1212 471 155 0 0 chr13 82208479 82208563 -38075749 + (TA)n Simple_repeat Simple_repeat 1 84 0 2 1212 864 264 14 43 chr13 82208818 82209028 -38075284 + B3 SINE B2 7 210 -6 2 1212 344 324 39 78 chr13 82209568 82209799 -38074513 + MER58A DNA MER1_type 1 222 -2 2 1212 673 266 46 11 chr13 82209989 82210164 -38074148 + B3A SINE B2 2 182 -16 2 1212 190 218 0 44 chr13 82210176 82210267 -38074045 + (CATA)n Simple_repeat Simple_repeat 2 88 0 2 1212 1913 147 102 8 chr13 82210692 82211075 -38073237 - Lx5 LINE L1 -1030 6020 5602 2 1212 1902 286 9 42 chr13 82211076 82211642 -38072670 + Lx5 LINE L1 6487 7033 -17 2 1212 1797 207 43 86 chr13 82211727 82212262 -38072050 + RLTR20B3 LTR ERVK 1 512 -65 2 1212 1182 244 63 28 chr13 82212301 82212588 -38071724 + MTE2a LTR MaLR 83 379 0 2 1212 251 346 100 27 chr13 82212602 82212712 -38071600 - MLT1F1 LTR MaLR -321 270 153 2 1212 256 305 73 10 chr13 82212731 82212827 -38071485 - MLT1F1 LTR MaLR -467 102 1 2 1212 307 325 86 43 chr13 82213192 82213401 -38070911 - L2a LINE L2 -2 3424 3207 2 1212 241 309 20 41 chr13 82213644 82213742 -38070570 - L2a LINE L2 -583 2836 2741 2 1212 283 231 0 15 chr13 82214876 82214942 -38069370 + L2a LINE L2 3358 3422 -4 2 1212 324 327 28 0 chr13 82217330 82217437 -38066875 - MLT1A LTR MaLR -4 370 261 2 1212 270 0 0 0 chr13 82217688 82217718 -38066594 + (TTTTA)n Simple_repeat Simple_repeat 4 33 0 2 1212 338 319 0 0 chr13 82217719 82217810 -38066502 - B1F1 SINE Alu -8 141 51 2 1212 357 248 130 32 chr13 82218049 82218203 -38066109 - MIRc SINE MIR -61 207 39 2 1212 289 316 60 60 chr13 82219139 82219307 -38065005 + ORR1E LTR MaLR 25 192 -167 2 1212 221 352 126 16 chr13 82219489 82219616 -38064696 - MER5A DNA MER1_type -4 185 45 2 1212 1737 159 79 55 chr13 82219733 82220099 -38064213 + ORR1C2 LTR MaLR 1 375 -9 2 1212 208 397 73 37 chr13 82220126 82220372 -38063940 + L2b LINE L2 3083 3337 -38 2 1212 252 0 0 0 chr13 82221809 82221837 -38062475 + (CA)n Simple_repeat Simple_repeat 2 29 0 2 1212 308 363 96 7 chr13 82222153 82222289 -38062023 + RSINE1 SINE B4 1 148 -17 2 1212 399 21 0 0 chr13 82222300 82222348 -38061964 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1212 183 80 0 0 chr13 82222348 82222372 -38061940 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 2 1212 827 185 0 33 chr13 82222471 82222622 -38061690 - B1_Mus2 SINE Alu 0 147 2 2 1212 21 0 0 0 chr13 82223089 82223110 -38061202 + AT_rich Low_complexity Low_complexity 1 21 0 2 1212 381 58 0 0 chr13 82224238 82224290 -38060022 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1212 1118 280 33 56 chr13 82224350 82224547 -38059765 + ORR1D2 LTR MaLR 2 201 -169 2 1212 4149 106 14 21 chr13 82224547 82225174 -38059138 + L1_Mus3 LINE L1 6016 6638 0 2 1212 1118 280 33 56 chr13 82225174 82225335 -38058977 + ORR1D2 LTR MaLR 202 352 -18 2 1212 2542 176 54 14 chr13 82225563 82226060 -38058252 - RMER15 LTR ERVL 0 575 59 2 1212 227 347 0 14 chr13 82226358 82226431 -38057881 + ID4_ SINE ID 5 76 -7 2 1212 22 0 0 0 chr13 82228206 82228228 -38056084 + AT_rich Low_complexity Low_complexity 1 22 0 2 1212 755 248 25 0 chr13 82228807 82228964 -38055348 - RMER15 LTR ERVL -154 421 261 2 1212 237 303 13 13 chr13 82229019 82229096 -38055216 - B4 SINE B4 -214 78 2 2 1212 285 51 0 0 chr13 82229264 82229303 -38055009 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1212 2014 131 18 39 chr13 82229322 82229655 -38054657 + ORR1A2 LTR MaLR 2 327 0 2 1212 190 56 56 0 chr13 82229722 82229758 -38054554 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2 1212 2772 64 0 0 chr13 82230528 82230874 -38053438 + ORR1A1 LTR MaLR 1 346 0 2 1212 1662 312 29 22 chr13 82230949 82231818 -38052494 - MuLV-int LTR ERV1 -3178 4428 3554 2 1212 2072 287 63 16 chr13 82231833 82232701 -38051611 - MuRRS4-int LTR ERV1 -3115 1948 1040 2 1212 415 238 0 155 chr13 82232742 82232961 -38051351 - MuRRS4-int LTR ERV1 -2648 1050 866 2 1212 255 85 0 21 chr13 82233071 82233119 -38051193 - MuRRS4-int LTR ERV1 -2870 828 782 2 1212 228 374 51 19 chr13 82233373 82233531 -38050781 - RLTR41 LTR ERV1 -73 373 211 2 1212 435 340 49 27 chr13 82233986 82234210 -38050102 + MER2 DNA MER2_type 117 345 0 2 1212 218 188 0 0 chr13 82237020 82237068 -38047244 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1212 2340 175 99 80 chr13 82237466 82238143 -38046169 - RMER6C LTR ERVK 0 690 1 3 1212 691 140 37 0 chr13 82238985 82239092 -38045220 + RMER6C LTR ERVK 1 111 -579 3 1212 375 290 0 61 chr13 82239076 82239190 -38045122 + MT2B LTR ERVL 181 287 -314 3 1212 286 267 54 62 chr13 82239173 82239285 -38045027 + B1_Mm SINE Alu 14 124 -23 3 1212 448 224 38 0 chr13 82239257 82239376 -38044936 + RMER6A LTR ERVK 347 480 -240 3 1212 11218 141 90 20 chr13 82239383 82243025 -38041287 - L1_Mus3 LINE L1 0 6638 2335 3 1212 237 86 0 0 chr13 82243023 82243058 -38041254 + MusHAL1 LINE L1 385 419 -2293 3 1212 4883 146 10 3 chr13 82243056 82244205 -38040107 - L1VL2 LINE L1 -2352 1263 107 3 1212 1769 161 35 13 chr13 82244208 82244522 -38039790 + RMER6A LTR ERVK 434 754 -2 3 1212 422 102 53 23 chr13 82244556 82244687 -38039625 + A-rich Low_complexity Low_complexity 2 136 0 3 1212 707 112 7 22 chr13 82246226 82246363 -38037949 + (TATG)n Simple_repeat Simple_repeat 2 136 0 3 1212 26 30 0 0 chr13 82246938 82246971 -38037341 + AT_rich Low_complexity Low_complexity 1 33 0 3 1212 191 330 110 25 chr13 82247202 82247320 -38036992 + MIRc SINE MIR 92 219 -49 3 1212 785 184 22 0 chr13 82247828 82247964 -38036348 + B1_Mur1 SINE Alu 1 139 -10 3 1212 489 17 0 0 chr13 82248647 82248705 -38035607 + (CA)n Simple_repeat Simple_repeat 2 59 0 3 1212 1510 232 75 34 chr13 82248958 82249436 -38034876 - Lx2B LINE L1 0 7000 6503 3 1212 257 100 19 74 chr13 82249862 82249916 -38034396 - MTB LTR MaLR -270 130 80 3 1212 587 81 0 0 chr13 82249916 82250002 -38034310 + L1_Mm LINE L1 3813 3898 -1985 3 1212 2391 93 104 53 chr13 82250002 82250454 -38033858 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1212 259 110 77 64 chr13 82250456 82250534 -38033778 + IAPEz-int LTR ERVK 3 81 -1906 3 1212 3362 81 8 25 chr13 82250533 82251352 -38032960 + IAPEz-int LTR ERVK 10 662 -5819 3 1212 2104 68 0 0 chr13 82251352 82251630 -38032682 + IAPEz-int LTR ERVK 1359 1636 -4845 3 1212 5786 38 4 19 chr13 82251629 82252386 -38031926 + IAPEz-int LTR ERVK 5736 6481 0 3 1212 2439 93 102 53 chr13 82252386 82252839 -38031473 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1212 1657 96 24 0 chr13 82252839 82253089 -38031223 + L1_Mm LINE L1 3893 4148 -1735 3 1212 382 298 37 6 chr13 82253502 82253664 -38030648 + Lx6 LINE L1 7256 7422 -38 3 1212 516 292 76 0 chr13 82254281 82254425 -38029887 - RSINE1 SINE B4 -10 155 1 3 1212 379 195 37 0 chr13 82254487 82254569 -38029743 + MT2A LTR ERVL 1 85 -448 3 1212 6901 45 9 0 chr13 82254571 82255500 -38028812 - L1Md_F2 LINE L1 0 6582 5691 3 1212 1071 249 166 18 chr13 82255559 82255908 -38028404 + MT2A LTR ERVL 103 589 -12 3 1212 279 316 0 50 chr13 82256009 82256089 -38028223 - ID4_ SINE ID 0 83 8 3 1212 5798 93 4 1 chr13 82256539 82257336 -38026976 - L1_Mus3 LINE L1 -1 6637 5839 3 1212 4466 119 4 22 chr13 82257336 82258069 -38026243 + L1_Mus3 LINE L1 5145 5864 -19 3 1212 322 353 122 39 chr13 82258550 82258836 -38025476 - L2a LINE L2 -32 3394 3085 3 1212 231 309 12 36 chr13 82259621 82259705 -38024607 + MLT1C LTR MaLR 45 126 -341 3 1212 462 306 43 11 chr13 82259707 82259895 -38024417 + B3A SINE B2 3 196 -2 3 1212 5115 113 103 107 chr13 82259899 82260187 -38024125 + L1Md_F LINE L1 36 355 -6164 3 1212 283 379 17 8 chr13 82260187 82260304 -38024008 + B3A SINE B2 71 188 -10 3 1212 5115 113 103 107 chr13 82260304 82261008 -38023304 + L1Md_F LINE L1 356 1139 -5380 3 1212 14355 89 6 1 chr13 82260974 82263135 -38021177 + L1Md_F2 LINE L1 1203 3374 -2509 3 1212 6271 63 0 0 chr13 82263115 82263946 -38020366 + L1Md_F2 LINE L1 4756 5586 -297 3 1212 7928 39 27 2 chr13 82263946 82264982 -38019330 + L1Md_F2 LINE L1 5587 6582 0 3 1212 1056 312 62 9 chr13 82265277 82265743 -38018569 - Lx8 LINE L1 -450 7023 6533 3 1212 484 257 66 125 chr13 82265749 82266038 -38018274 - Lx8 LINE L1 -1090 6383 6112 3 1212 231 114 0 0 chr13 82266162 82266197 -38018115 + (GGA)n Simple_repeat Simple_repeat 3 37 0 3 1212 1809 207 48 13 chr13 82266197 82266594 -38017718 - RMER1B Other Other -145 921 511 3 1212 3003 102 26 13 chr13 82266599 82267064 -38017248 + RLTR31B_Mm LTR ERVK 1 471 -86 3 1212 1513 300 30 11 chr13 82267076 82267514 -38016798 - RMER1A Other Other -584 446 1 3 1212 265 258 9 47 chr13 82267522 82267628 -38016684 - Lx8 LINE L1 -588 5292 5191 3 1212 2320 197 37 14 chr13 82267845 82268359 -38015953 + RLTR11A2 LTR ERVK 2 527 0 3 1212 721 281 35 17 chr13 82268416 82268590 -38015722 + B3A SINE B2 14 190 -8 3 1212 423 0 0 0 chr13 82269961 82270008 -38014304 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1212 477 0 0 0 chr13 82270008 82270060 -38014252 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 1212 330 228 55 73 chr13 82270726 82270835 -38013477 + B4A SINE B4 186 292 0 3 1212 327 287 55 62 chr13 82270884 82271029 -38013283 + MIRb SINE MIR 82 225 -43 3 1212 299 266 29 105 chr13 82271552 82271724 -38012588 + RLTR40 LTR ERVK 497 655 -162 3 1212 24 32 0 0 chr13 82272554 82272585 -38011727 + AT_rich Low_complexity Low_complexity 1 31 0 3 1212 228 308 0 103 chr13 82272649 82272736 -38011576 + ID4_ SINE ID 6 83 0 3 1212 248 288 12 12 chr13 82272773 82272854 -38011458 + ID4_ SINE ID 3 83 0 3 1212 686 172 7 0 chr13 82272883 82273028 -38011284 + Lx9 LINE L1 7498 7643 -1 3 1212 513 195 50 31 chr13 82273840 82273999 -38010313 - Lx9 LINE L1 -10 7634 7473 3 1212 591 91 66 18 chr13 82274774 82274941 -38009371 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 3 1212 286 175 49 12 chr13 82274952 82275033 -38009279 + (TCTA)n Simple_repeat Simple_repeat 2 85 0 3 1212 3749 177 12 36 chr13 82277231 82277863 -38006449 + L1VL4 LINE L1 549 1159 -5498 3 1212 324 0 0 0 chr13 82277863 82277899 -38006413 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1212 3907 85 2 19 chr13 82277899 82278541 -38005771 + L1VL4 LINE L1 1160 1797 -2117 3 1212 30805 78 2 7 chr13 82278534 82283706 -38000606 + L1Md_F2 LINE L1 442 5586 -297 3 1212 8043 51 0 2 chr13 82283706 82284704 -37999608 + L1Md_F2 LINE L1 5587 6582 0 3 1212 11015 109 24 6 chr13 82284704 82286377 -37997935 + L1VL4 LINE L1 1786 3475 -439 3 1212 183 42 0 0 chr13 82286377 82286401 -37997911 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 1212 11015 169 19 5 chr13 82286401 82286971 -37997341 + L1VL4 LINE L1 3476 4056 -1830 3 1212 7832 123 146 9 chr13 82286962 82289705 -37994607 + L1Md_A LINE L1 446 3852 -2034 3 1212 5235 169 36 22 chr13 82289702 82289814 -37994498 + Lx LINE L1 4772 4864 -1019 3 1212 989 99 0 0 chr13 82289814 82289945 -37994367 - B1_Mus1 SINE Alu -16 132 2 3 1212 5235 137 43 11 chr13 82289945 82291330 -37992982 + Lx LINE L1 4865 6318 -336 3 1212 689 295 93 27 chr13 82291330 82291630 -37992682 + RLTR9A LTR ERVK 49 368 0 3 1212 1821 116 7 3 chr13 82291630 82291923 -37992389 + Lx LINE L1 6341 6634 -20 3 1212 764 274 18 0 chr13 82292476 82292644 -37991668 + B4 SINE B4 122 292 0 3 1212 470 288 52 88 chr13 82292817 82293011 -37991301 + RMER20B LTR ERVK 3 189 -438 3 1212 801 260 82 33 chr13 82293072 82293411 -37990901 + RMER20B LTR ERVK 124 478 -38 3 1212 3512 13 10 0 chr13 82293485 82293877 -37990435 + MTA_Mm LTR MaLR 1 396 0 3 1212 891 63 28 39 chr13 82294995 82295177 -37989135 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 3 1212 211 286 14 28 chr13 82295473 82295545 -37988767 - L3 LINE CR1 -3323 1166 1096 3 1212 483 18 0 0 chr13 82296164 82296220 -37988092 + (CA)n Simple_repeat Simple_repeat 2 57 0 3 1212 251 292 0 22 chr13 82296679 82296770 -37987542 + T-rich Low_complexity Low_complexity 5 93 0 3 1212 676 196 52 39 chr13 82297001 82297221 -37987091 + Lx4B LINE L1 6729 7050 -8 3 1212 522 0 0 0 chr13 82297337 82297395 -37986917 + (TCTA)n Simple_repeat Simple_repeat 2 59 0 3 1212 654 203 0 23 chr13 82297520 82297651 -37986661 - B1_Mur1 SINE Alu 0 149 22 3 1212 273 366 75 34 chr13 82298329 82298476 -37985836 - Tigger15a DNA TcMar -542 173 21 3 1212 312 251 129 30 chr13 82298707 82298908 -37985404 + Lx9 LINE L1 7422 7642 -2 3 1212 251 262 0 16 chr13 82299062 82299124 -37985188 + GA-rich Low_complexity Low_complexity 5 65 0 3 1212 289 377 23 91 chr13 82299132 82299267 -37985045 + RSINE1 SINE B4 3 126 -39 3 1212 351 0 0 0 chr13 82299267 82299306 -37985006 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 1212 289 377 23 91 chr13 82299306 82299345 -37984967 + RSINE1 SINE B4 127 165 0 3 1212 27 81 0 0 chr13 82299694 82299756 -37984556 + AT_rich Low_complexity Low_complexity 1 62 0 3 1212 484 344 78 25 chr13 82300067 82300350 -37983962 - L1MD3 LINE L1 -105 7890 7593 3 1212 243 211 31 21 chr13 82300369 82300466 -37983846 + (TCTA)n Simple_repeat Simple_repeat 2 99 0 3 1212 465 352 60 27 chr13 82300587 82300885 -37983427 - Lx8 LINE L1 -155 7318 7011 3 1212 22 0 0 0 chr13 82301050 82301072 -37983240 + AT_rich Low_complexity Low_complexity 1 22 0 3 1212 4341 113 5 0 chr13 82301545 82302171 -37982141 - L1_Mus3 LINE L1 -7 6631 6003 3 1212 3760 72 3 0 chr13 82302171 82302780 -37981532 + L1_Mus3 LINE L1 5313 5925 -713 3 1212 573 338 105 20 chr13 82303147 82303443 -37980869 + MLT1D LTR MaLR 37 357 -148 3 1212 1074 227 62 31 chr13 82303581 82303935 -37980377 + Lx9 LINE L1 7266 7630 -14 3 1212 28174 82 32 1 chr13 82303940 82309188 -37975124 - L1Md_F LINE L1 -280 5603 192 3 1212 356 225 157 98 chr13 82309436 82309589 -37974723 + HAL1-3A_ME LINE L1 2276 2437 -421 3 1212 569 200 6 23 chr13 82309608 82309782 -37974530 + GA-rich Low_complexity Low_complexity 3 173 0 3 1212 315 294 141 56 chr13 82310102 82310351 -37973961 + L1ME3 LINE L1 5892 6161 -1 3 1212 499 295 109 41 chr13 82311075 82311535 -37972777 - Charlie2a DNA MER1_type -129 2732 2242 3 1212 285 309 268 21 chr13 82311803 82312094 -37972218 - Lx8 LINE L1 -315 7158 6796 3 1212 2172 113 146 0 chr13 82312209 82312599 -37971713 - RLTR47_MM LTR ERV1 -83 449 3 3 1212 291 294 75 38 chr13 82312742 82312954 -37971358 - MuRRS4-int LTR ERV1 -220 4843 4663 3 1213 316 368 6 6 chr13 82313473 82313648 -37970664 - MMERGLN-int LTR ERV1 -2009 5547 5373 3 1213 1411 272 38 11 chr13 82313792 82314241 -37970071 - MuRRS4-int LTR ERV1 -1048 4015 3555 3 1213 2865 156 104 68 chr13 82314314 82315022 -37969290 - RMER17A LTR ERVK -17 734 1 3 1213 639 0 0 0 chr13 82315275 82315346 -37968966 + (TTC)n Simple_repeat Simple_repeat 2 72 0 3 1213 22 35 0 0 chr13 82315346 82315375 -37968937 + AT_rich Low_complexity Low_complexity 1 29 0 3 1213 595 352 31 46 chr13 82315457 82315934 -37968378 - MuLV-int LTR ERV1 -3166 4440 3971 3 1213 1042 332 60 52 chr13 82315969 82317211 -37967101 - MuRRS4-int LTR ERV1 -5108 2448 1196 3 1213 2753 36 2 200 chr13 82317661 82318147 -37966165 - RLTR10 LTR ERVK 0 390 1 3 1213 349 118 70 42 chr13 82318492 82318563 -37965749 - RLTR47_MM LTR ERV1 0 532 460 3 1213 244 238 48 0 chr13 82318627 82318690 -37965622 - Charlie2a DNA MER1_type -923 1938 1873 3 1213 511 53 27 0 chr13 82318852 82318927 -37965385 + (TCTA)n Simple_repeat Simple_repeat 4 80 0 3 1213 376 327 33 0 chr13 82319265 82319418 -37964894 + Lx8 LINE L1 6882 7039 -434 3 1213 192 175 31 16 chr13 82319451 82319515 -37964797 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 1213 262 389 129 28 chr13 82319967 82320253 -37964059 - Charlie2a DNA MER1_type -2347 514 200 3 1213 774 249 34 29 chr13 82320355 82320562 -37963750 - B3 SINE B2 -8 208 1 3 1213 1604 66 5 0 chr13 82322488 82322700 -37961612 - MTA_Mm LTR MaLR -183 213 1 3 1213 8704 54 6 3 chr13 82322700 82323795 -37960517 - MTA_Mm-int LTR MaLR 0 1098 1 3 1213 1763 62 4 4 chr13 82323796 82324024 -37960288 - MTA_Mm LTR MaLR -1 395 168 3 1213 374 228 21 21 chr13 82324068 82324162 -37960150 + ID_B1 SINE B4 128 221 -3 4 1213 1300 48 6 0 chr13 82324164 82324330 -37959982 - MTA_Mm LTR MaLR -229 167 1 4 1213 326 289 8 16 chr13 82324332 82324455 -37959857 + GA-rich Low_complexity Low_complexity 4 125 0 4 1213 397 217 21 21 chr13 82324458 82324552 -37959760 + ID_B1 SINE B4 128 221 -3 4 1213 726 136 0 0 chr13 82324733 82324851 -37959461 + (TTTC)n Simple_repeat Simple_repeat 2 119 0 4 1213 312 27 0 0 chr13 82325040 82325077 -37959235 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1213 581 61 40 10 chr13 82325104 82325203 -37959109 + (TAGA)n Simple_repeat Simple_repeat 4 105 0 4 1213 369 262 72 36 chr13 82325204 82325315 -37958997 - ID_B1 SINE B4 -23 201 87 4 1213 190 359 63 72 chr13 82326080 82326191 -37958121 - L2c LINE L2 -240 3147 3038 4 1213 680 287 131 39 chr13 82326261 82326598 -37957714 + RLTR9A LTR ERVK 1 368 0 4 1213 183 100 0 0 chr13 82327209 82327239 -37957073 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 4 1213 676 278 52 29 chr13 82327697 82327881 -37956431 + ID_B1 SINE B4 22 219 -73 4 1213 225 0 0 0 chr13 82327945 82327970 -37956342 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1213 1966 136 10 19 chr13 82328736 82329044 -37955268 - RLTR27 LTR ERVK 0 309 5 4 1213 1388 157 4 23 chr13 82329044 82329305 -37955007 - MMERVK10C-int LTR ERVK -5 7576 7321 4 1213 351 312 18 24 chr13 82329426 82329590 -37954722 - MMERVK10C-int LTR ERVK -512 7069 6907 4 1213 5942 306 32 37 chr13 82329809 82330172 -37954140 - MMERVK10C-int LTR ERVK -2104 5477 5123 4 1213 1394 205 25 13 chr13 82330172 82330488 -37953824 + RLTR46 LTR ERVK 1 320 0 4 1213 5942 306 32 37 chr13 82330488 82333988 -37950324 - MMERVK10C-int LTR ERVK -2459 5122 1632 4 1213 499 178 20 0 chr13 82333990 82334091 -37950221 + B3 SINE B2 114 216 0 4 1213 4772 117 5 6 chr13 82334094 82335100 -37949212 - L1_Mus4 LINE L1 -573 6063 5060 4 1213 3487 118 33 9 chr13 82335101 82335646 -37948666 + Lx LINE L1 6091 6648 -6 4 1213 300 353 122 15 chr13 82336084 82336288 -37948024 + MIR SINE MIR 4 229 -33 4 1213 476 306 54 77 chr13 82336332 82336630 -37947682 + B4A SINE B4 2 292 0 4 1213 1101 317 52 6 chr13 82336742 82337085 -37947227 + ORR1D2 LTR MaLR 1 359 -11 4 1213 334 241 81 0 chr13 82337622 82337709 -37946603 - MLT1B LTR MaLR -5 385 292 4 1213 309 172 17 0 chr13 82337722 82337780 -37946532 - BGLII LTR ERVK 0 421 363 4 1213 3021 77 2 30 chr13 82337781 82338221 -37946091 - L1_Mm LINE L1 -483 5400 4973 4 1213 1260 34 0 0 chr13 82338224 82338373 -37945939 + L1_Mm LINE L1 5367 5515 -368 4 1213 791 104 140 15 chr13 82338373 82338509 -37945803 - BGLII LTR ERVK -267 154 2 4 1213 505 322 40 0 chr13 82338637 82338789 -37945523 - MLT1B LTR MaLR -232 158 1 4 1213 478 223 123 0 chr13 82338858 82338988 -37945324 + B1_Mur4 SINE Alu 5 150 0 4 1213 1683 184 12 43 chr13 82341376 82341699 -37942613 - MTC LTR MaLR 0 421 109 4 1213 1808 174 142 0 chr13 82341699 82342226 -37942086 - Lx2 LINE L1 -416 6584 5983 4 1213 2236 160 15 20 chr13 82342226 82342634 -37941678 + Lx2 LINE L1 6592 6997 0 4 1213 523 144 10 58 chr13 82342646 82342727 -37941585 - MTC LTR MaLR -323 98 18 4 1213 182 33 0 62 chr13 82342727 82342759 -37941553 + (CAA)n Simple_repeat Simple_repeat 2 31 0 4 1213 523 144 10 58 chr13 82342759 82342780 -37941532 - MTC LTR MaLR -404 17 1 4 1213 1893 232 140 39 chr13 82342780 82343577 -37940735 - MTC-int LTR MaLR 0 1258 286 4 1213 4280 114 19 0 chr13 82343720 82344350 -37939962 - L1_Mus4 LINE L1 -47 6589 5948 4 1213 4785 30 7 0 chr13 82344350 82344917 -37939395 + RLTR10-int LTR ERVK 344 914 -1073 4 1213 6555 30 3 7 chr13 82344934 82345708 -37938604 - IAPEz-int LTR ERVK -2 6479 5709 4 1213 3067 20 3 0 chr13 82345699 82346055 -37938257 - IAPEz-int LTR ERVK -2124 4357 4001 4 1213 20478 63 21 23 chr13 82346053 82348920 -37935392 - IAPEz-int LTR ERVK -3707 2774 10 4 1213 392 73 0 0 chr13 82348903 82348958 -37935354 - IAPEz-int LTR ERVK -1930 57 3 4 1213 2176 93 15 45 chr13 82348960 82349297 -37935015 - IAPLTR2b LTR ERVK 0 327 1 4 1213 23995 161 33 8 chr13 82349297 82353904 -37930408 - L1_Mus4 LINE L1 -684 5952 1259 4 1213 186 43 0 0 chr13 82353904 82353927 -37930385 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 4 1213 23995 179 64 25 chr13 82353927 82354606 -37929706 - L1_Mus4 LINE L1 -4625 1258 548 4 1213 489 17 0 0 chr13 82354688 82354746 -37929566 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1213 1200 210 58 18 chr13 82354759 82355046 -37929266 - ORR1D1 LTR MaLR 0 370 64 4 1213 434 168 7 15 chr13 82355498 82355585 -37928727 + B1_Mur4 SINE Alu 21 109 -11 4 1213 6616 112 82 4 chr13 82355990 82357499 -37926813 - L1_Mus3 LINE L1 0 6638 4982 4 1213 447 68 0 0 chr13 82357559 82357618 -37926694 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 1213 12764 109 14 15 chr13 82357678 82359772 -37924540 - MusHAL1 LINE L1 -620 2092 1 4 1213 2186 242 25 45 chr13 82359777 82359824 -37924488 - L1VL4 LINE L1 -5376 1184 1138 4 1213 2703 74 0 34 chr13 82359824 82360202 -37924110 - L1Md_F2 LINE L1 -13 6569 6205 4 1213 2186 243 42 45 chr13 82360202 82360962 -37923350 - L1VL4 LINE L1 -5423 1137 319 4 1213 230 106 21 0 chr13 82361535 82361582 -37922730 + (TTTTA)n Simple_repeat Simple_repeat 2 49 0 4 1213 652 201 293 0 chr13 82362658 82362822 -37921490 - B3 SINE B2 -4 212 1 4 1213 23 33 0 0 chr13 82363169 82363199 -37921113 + AT_rich Low_complexity Low_complexity 1 30 0 4 1213 3346 40 0 5 chr13 82363200 82363598 -37920714 - MTA_Mm LTR MaLR 0 396 1 4 1213 430 279 35 35 chr13 82363756 82363901 -37920411 + ORR1D2 LTR MaLR 224 368 -2 4 1213 474 281 62 8 chr13 82366208 82366337 -37917975 - MTE2b LTR MaLR -7 372 237 4 1213 514 0 30 0 chr13 82366389 82366455 -37917857 + (TTC)n Simple_repeat Simple_repeat 1 68 0 4 1213 30 45 0 0 chr13 82366618 82366662 -37917650 + AT_rich Low_complexity Low_complexity 1 44 0 4 1213 5235 152 17 4 chr13 82367184 82368125 -37916187 + L1_Mur2 LINE L1 2507 3459 -2418 4 1213 335 192 49 29 chr13 82368118 82368220 -37916092 + Lx4A LINE L1 6955 7058 0 4 1213 260 273 148 0 chr13 82368237 82368325 -37915987 - MTE-int LTR MaLR -1355 225 125 4 1213 306 115 0 0 chr13 82368325 82368377 -37915935 + (T)n Simple_repeat Simple_repeat 1 52 0 4 1213 1189 34 0 13 chr13 82368386 82368535 -37915777 - B1_Mm SINE Alu 0 147 1 4 1213 293 303 114 8 chr13 82368553 82368676 -37915636 - MTE-int LTR MaLR -1444 136 1 4 1213 407 245 129 54 chr13 82368837 82368984 -37915328 - MTE2b LTR MaLR -221 158 1 4 1213 388 0 19 19 chr13 82370424 82370477 -37913835 + (TATAA)n Simple_repeat Simple_repeat 2 54 0 4 1213 290 26 26 0 chr13 82370822 82370861 -37913451 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 4 1213 736 300 154 32 chr13 82370864 82371202 -37913110 + Lx3C LINE L1 6587 6965 -11 4 1213 2711 88 4 99 chr13 82371364 82371858 -37912454 + RMER17A LTR ERVK 1 447 -304 4 1213 229 294 41 61 chr13 82371962 82372060 -37912252 - B1F SINE Alu 0 149 54 4 1213 432 0 0 0 chr13 82372668 82372716 -37911596 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 1213 356 205 34 67 chr13 82374389 82374478 -37909834 - HAL1-3A_ME LINE L1 -797 2061 1976 4 1213 420 321 0 0 chr13 82374478 82374618 -37909694 + (TG)n Simple_repeat Simple_repeat 2 141 0 4 1213 180 0 0 0 chr13 82375231 82375251 -37909061 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1213 24581 160 27 9 chr13 82375570 82381525 -37902787 + L1_Mus4 LINE L1 589 6634 -2 4 1213 231 91 0 0 chr13 82381533 82381566 -37902746 + Lx3_Mus LINE L1 5827 5859 -1150 4 1213 1869 248 40 128 chr13 82381747 82381792 -37902520 - RMER19C LTR ERVK 0 611 572 4 1213 709 95 0 0 chr13 82381792 82381897 -37902415 + L1_Mus2 LINE L1 6462 6566 0 4 1213 1869 248 40 128 chr13 82381897 82382494 -37901818 - RMER19C LTR ERVK -40 571 25 4 1213 387 217 107 18 chr13 82382948 82383117 -37901195 - Lx9 LINE L1 0 7644 7461 4 1213 24 0 0 0 chr13 82383127 82383151 -37901161 + AT_rich Low_complexity Low_complexity 1 24 0 4 1213 29 60 0 0 chr13 82383185 82383235 -37901077 + AT_rich Low_complexity Low_complexity 1 50 0 4 1213 6277 65 1 10 chr13 82384415 82385233 -37899079 - L1_Mus1 LINE L1 0 6567 5757 4 1213 357 227 17 17 chr13 82386241 82386416 -37897896 + (TG)n Simple_repeat Simple_repeat 2 176 0 4 1213 1148 103 6 0 chr13 82386416 82386590 -37897722 + (GA)n Simple_repeat Simple_repeat 1 175 0 4 1213 201 133 0 0 chr13 82386590 82386620 -37897692 + (AGGGGG)n Simple_repeat Simple_repeat 4 33 0 4 1213 2239 144 79 25 chr13 82387081 82387487 -37896825 - Lx2B LINE L1 -10 6990 6563 4 1213 21 0 0 0 chr13 82387901 82387922 -37896390 + AT_rich Low_complexity Low_complexity 1 21 0 4 1213 498 75 0 0 chr13 82387944 82388011 -37896301 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1213 25 24 0 23 chr13 82388397 82388415 -37895897 + AT_rich Low_complexity Low_complexity 1 18 0 4 1213 4450 10 0 0 chr13 82388415 82388908 -37895404 + MT2_Mm LTR ERVL 1 493 0 4 1213 25 24 0 23 chr13 82388908 82388932 -37895380 + AT_rich Low_complexity Low_complexity 1 24 0 4 1213 304 281 9 34 chr13 82388954 82389063 -37895249 - ID_B1 SINE B4 -106 186 84 4 1213 333 0 0 0 chr13 82389382 82389419 -37894893 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1213 975 240 5 5 chr13 82389430 82389627 -37894685 - B3 SINE B2 -18 198 2 4 1213 522 116 197 43 chr13 82389987 82390104 -37894208 - ORR1B2 LTR MaLR -232 135 1 4 1213 223 72 23 23 chr13 82390139 82390182 -37894130 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1213 1495 182 84 0 chr13 82390581 82390866 -37893446 + ORR1B2 LTR MaLR 1 309 -58 4 1213 638 360 81 25 chr13 82392407 82392766 -37891546 - MLT2B2 LTR ERVL -15 500 122 4 1213 623 341 46 27 chr13 82392959 82393218 -37891094 - Lx8 LINE L1 -202 7271 7008 4 1213 276 330 42 34 chr13 82393232 82393351 -37890961 - MLT2B2 LTR ERVL -381 139 20 4 1213 431 326 75 65 chr13 82394575 82394854 -37889458 + HERV16-int LTR ERVL 929 1210 -3786 4 1213 353 288 92 0 chr13 82398997 82399150 -37885162 + L1MA9 LINE L1 6017 6183 -129 4 1213 525 16 0 0 chr13 82399898 82399960 -37884352 + (TAG)n Simple_repeat Simple_repeat 1 62 0 4 1213 180 327 64 55 chr13 82400001 82400111 -37884201 - MIRm SINE MIR -141 135 25 4 1213 1001 304 89 30 chr13 82401221 82401716 -37882596 - Charlie1a DNA MER1_type -98 1357 841 4 1213 3112 115 8 4 chr13 82401716 82402187 -37882125 - Lx LINE L1 -4 6650 6178 4 1213 1001 304 89 30 chr13 82402187 82402386 -37881926 - Charlie1a DNA MER1_type -615 840 623 4 1213 433 325 159 19 chr13 82402383 82402803 -37881509 - Charlie1a DNA MER1_type -952 503 25 4 1213 213 119 0 0 chr13 82403741 82403783 -37880529 + (T)n Simple_repeat Simple_repeat 1 42 0 4 1213 1617 79 0 0 chr13 82405569 82405783 -37878529 - L1_Mus2 LINE L1 -1 6565 6352 4 1213 846 30 0 0 chr13 82406169 82406270 -37878042 + (TC)n Simple_repeat Simple_repeat 2 102 0 4 1213 354 61 0 0 chr13 82406270 82406318 -37877994 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1213 1294 288 39 25 chr13 82406417 82406780 -37877532 - MTE2a LTR MaLR -9 370 3 4 1213 25 31 0 0 chr13 82407011 82407043 -37877269 + AT_rich Low_complexity Low_complexity 1 32 0 4 1213 240 284 8 41 chr13 82407379 82407492 -37876820 - Lx7 LINE L1 -16 7680 7571 4 1213 374 57 0 19 chr13 82407492 82407546 -37876766 + (CAAAC)n Simple_repeat Simple_repeat 2 54 0 5 1213 396 0 0 0 chr13 82407555 82407599 -37876713 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1213 2057 295 81 16 chr13 82407614 82408283 -37876029 - Lx7 LINE L1 -396 7300 6589 4 1213 936 235 10 9 chr13 82408352 82408599 -37875713 + L1_Mur3 LINE L1 5291 5531 -346 5 1213 600 321 4 58 chr13 82408791 82409016 -37875296 - B3 SINE B2 -3 213 1 5 1213 299 219 14 14 chr13 82409888 82409962 -37874350 + PB1D10 SINE Alu 44 117 0 5 1213 271 309 53 53 chr13 82411950 82412138 -37872174 - MamRep1161 DNA TcMar -737 220 33 5 1213 7289 104 12 6 chr13 82412223 82413526 -37870786 - L1_Mur1 LINE L1 -2052 3834 2526 5 1213 807 168 0 7 chr13 82413535 82413685 -37870627 + Lx LINE L1 6500 6648 -6 5 1213 541 326 27 7 chr13 82413775 82413951 -37870361 - B3A SINE B2 -6 187 16 5 1213 1145 69 14 0 chr13 82414102 82414247 -37870065 + B1_Mus2 SINE Alu 1 147 0 5 1213 255 93 0 0 chr13 82414247 82414290 -37870022 + (CAAAA)n Simple_repeat Simple_repeat 1 43 0 5 1213 1103 65 0 0 chr13 82417485 82417623 -37866689 + B1_Mm SINE Alu 1 138 -9 5 1213 500 30 15 0 chr13 82417623 82417689 -37866623 + (CAAAC)n Simple_repeat Simple_repeat 2 68 0 5 1213 243 0 0 0 chr13 82418401 82418428 -37865884 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1213 2327 193 52 20 chr13 82418510 82419049 -37865263 - RLTR31_Mm LTR ERVK 0 561 6 5 1213 228 196 58 19 chr13 82419492 82419544 -37864768 - MIRb SINE MIR -86 182 129 5 1213 27 62 0 0 chr13 82420312 82420360 -37863952 + AT_rich Low_complexity Low_complexity 1 48 0 5 1213 353 353 0 10 chr13 82420852 82420955 -37863357 + PB1 SINE Alu 2 103 -24 5 1213 228 67 0 0 chr13 82422926 82422956 -37861356 + (TTAA)n Simple_repeat Simple_repeat 4 33 0 5 1213 712 218 73 0 chr13 82422976 82423141 -37861171 - Lx LINE L1 -29 7029 6853 5 1213 2237 130 16 32 chr13 82423377 82423634 -37860678 - Lx LINE L1 -6 6648 6386 5 1213 315 0 0 0 chr13 82423634 82423669 -37860643 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1213 2237 130 16 32 chr13 82423669 82423785 -37860527 - Lx LINE L1 -269 6385 6281 5 1213 3050 96 20 0 chr13 82423785 82424224 -37860088 + L1_Mur2 LINE L1 4649 5096 -781 5 1213 243 204 0 53 chr13 82424335 82424392 -37859920 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 5 1213 24 0 0 0 chr13 82424756 82424780 -37859532 + AT_rich Low_complexity Low_complexity 1 24 0 5 1213 1008 82 0 64 chr13 82425251 82425407 -37858905 - B1_Mus1 SINE Alu -2 146 1 5 1213 290 321 0 0 chr13 82425474 82425555 -37858757 + CT-rich Low_complexity Low_complexity 2 82 0 5 1213 11336 153 98 166 chr13 82425596 82427391 -37856921 + L1_Mur2 LINE L1 738 2073 -3804 5 1213 459 0 0 0 chr13 82427391 82427442 -37856870 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1213 11336 140 114 199 chr13 82427442 82427753 -37856559 + L1_Mur2 LINE L1 2074 2347 -3530 5 1213 1162 68 0 0 chr13 82427753 82427900 -37856412 + B1_Mus2 SINE Alu 1 147 0 5 1213 11336 140 114 199 chr13 82427900 82428352 -37855960 + L1_Mur2 LINE L1 2348 2754 -3123 5 1213 3033 48 3 0 chr13 82428352 82428723 -37855589 - L1_Mus1 LINE L1 -2 6565 6194 5 1213 11336 140 114 199 chr13 82428723 82429242 -37855070 + L1_Mur2 LINE L1 2755 3059 -2818 5 1213 195 42 0 0 chr13 82429242 82429266 -37855046 + (GGGGA)n Simple_repeat Simple_repeat 1 24 0 5 1213 11336 140 114 199 chr13 82429266 82430837 -37853475 + L1_Mur2 LINE L1 3060 5023 -854 5 1213 1197 82 110 0 chr13 82430819 82431001 -37853311 + Lx4A LINE L1 5728 5929 -1129 5 1213 5437 165 55 2 chr13 82431001 82431989 -37852323 + Lx4A LINE L1 6017 7056 -2 5 1213 23 0 0 0 chr13 82431990 82432013 -37852299 + AT_rich Low_complexity Low_complexity 1 23 0 5 1213 233 143 95 0 chr13 82432734 82432776 -37851536 + RLTR47_MM LTR ERV1 404 449 -83 5 1213 189 0 0 0 chr13 82432776 82432797 -37851515 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1213 655 301 32 22 chr13 82433341 82433657 -37850655 - L1MA4 LINE L1 -368 5932 5614 5 1213 656 313 42 13 chr13 82433751 82434062 -37850250 + L1M2 LINE L1 4961 5280 -863 5 1213 280 262 109 27 chr13 82434195 82434305 -37850007 - MLT1E3 LTR MaLR -435 189 71 5 1213 357 96 53 11 chr13 82435222 82435300 -37849012 + GA-rich Low_complexity Low_complexity 2 84 0 5 1213 894 122 0 0 chr13 82435300 82435480 -37848832 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1213 357 96 53 11 chr13 82435480 82435496 -37848816 + polypurine Low_complexity Low_complexity 85 100 0 5 1213 1294 303 80 18 chr13 82436770 82437571 -37846741 + L1MC1 LINE L1 4724 5575 -758 5 1213 939 267 70 16 chr13 82437686 82438059 -37846253 + L1MC1 LINE L1 5559 5951 -382 5 1213 458 278 35 9 chr13 82438085 82438201 -37846111 + ID_B1 SINE B4 100 218 -6 5 1213 333 0 0 0 chr13 82438205 82438242 -37846070 + (CCAA)n Simple_repeat Simple_repeat 3 39 0 5 1213 548 285 121 70 chr13 82438243 82438598 -37845714 + L1MC1 LINE L1 5941 6313 -20 5 1213 489 163 0 0 chr13 82438642 82438734 -37845578 + (TG)n Simple_repeat Simple_repeat 1 92 0 5 1213 2710 229 84 54 chr13 82439288 82440046 -37844266 - Lx6 LINE L1 -15 7445 6665 5 1213 1123 56 7 0 chr13 82440155 82440299 -37844013 + B1_Mus2 SINE Alu 2 146 -1 5 1213 218 132 19 0 chr13 82440322 82440375 -37843937 + (CAA)n Simple_repeat Simple_repeat 1 54 0 5 1213 195 42 0 0 chr13 82440765 82440789 -37843523 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1213 570 98 0 0 chr13 82440796 82440878 -37843434 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 1213 343 346 92 25 chr13 82440952 82441115 -37843197 - B4 SINE B4 -116 176 3 5 1213 662 12 24 0 chr13 82442877 82442959 -37841353 + (TTTC)n Simple_repeat Simple_repeat 3 86 0 5 1214 23 0 0 0 chr13 82444505 82444528 -37839784 + AT_rich Low_complexity Low_complexity 1 23 0 5 1214 387 0 0 0 chr13 82444632 82444675 -37839637 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1214 5887 120 0 3 chr13 82445209 82446127 -37838185 - L1_Mus3 LINE L1 -184 5699 4785 5 1214 6636 79 4 0 chr13 82446126 82447059 -37837253 + L1_Mus3 LINE L1 5702 6638 0 5 1214 387 334 50 59 chr13 82447408 82447768 -37836544 + L2c LINE L2 2910 3275 -100 5 1214 24 32 0 0 chr13 82448180 82448211 -37836101 + AT_rich Low_complexity Low_complexity 1 31 0 5 1214 734 208 65 0 chr13 82448211 82448427 -37835885 + Lx9 LINE L1 7407 7636 -8 5 1214 27 29 0 0 chr13 82448432 82448466 -37835846 + AT_rich Low_complexity Low_complexity 1 34 0 5 1214 187 346 9 45 chr13 82448844 82448956 -37835356 - MIR SINE MIR -119 143 36 5 1214 22 35 0 0 chr13 82449839 82449868 -37834444 + AT_rich Low_complexity Low_complexity 1 29 0 5 1214 806 320 67 25 chr13 82450055 82450479 -37833833 - Lx9 LINE L1 -171 7473 7034 5 1214 2289 148 166 87 chr13 82450479 82451113 -37833199 + RMER6C LTR ERVK 4 687 -3 5 1214 806 320 67 25 chr13 82451113 82451239 -37833073 - Lx9 LINE L1 -611 7033 6901 5 1214 261 0 0 0 chr13 82451246 82451275 -37833037 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 5 1214 598 351 57 37 chr13 82451307 82451659 -37832653 - MLT1A LTR MaLR -15 359 1 5 1214 5574 107 100 2 chr13 82451717 82453099 -37831213 - L1_Mus3 LINE L1 -12 6626 5109 5 1214 2805 159 2 41 chr13 82453096 82453653 -37830659 + L1_Mus3 LINE L1 4585 5119 -764 5 1214 370 373 30 72 chr13 82453727 82454062 -37830250 - ORR1E LTR MaLR -34 325 5 5 1214 23 54 0 0 chr13 82454215 82454252 -37830060 + AT_rich Low_complexity Low_complexity 1 37 0 5 1214 184 342 123 16 chr13 82455546 82455733 -37828579 + L2a LINE L2 3181 3387 -39 5 1214 267 31 0 0 chr13 82458156 82458188 -37826124 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1214 35583 77 14 14 chr13 82458916 82465240 -37819072 - L1Md_F3 LINE L1 -14 6573 253 5 1214 684 287 124 19 chr13 82466348 82466578 -37817734 - L1MC4 LINE L1 -313 7729 7468 5 1214 228 67 0 0 chr13 82466578 82466608 -37817704 + (TA)n Simple_repeat Simple_repeat 2 31 0 5 1214 684 287 124 19 chr13 82466608 82466916 -37817396 - L1MC4 LINE L1 -575 7467 7134 5 1214 6166 134 22 26 chr13 82466886 82468044 -37816268 - Lx LINE L1 -3 6651 5499 5 1214 22 35 0 0 chr13 82468109 82468138 -37816174 + AT_rich Low_complexity Low_complexity 1 29 0 5 1214 27 49 0 0 chr13 82468221 82468262 -37816050 + AT_rich Low_complexity Low_complexity 1 41 0 5 1214 226 245 64 0 chr13 82468489 82468583 -37815729 + (TCTA)n Simple_repeat Simple_repeat 1 100 0 5 1214 422 305 112 70 chr13 82468860 82469047 -37815265 - B3 SINE B2 0 195 1 5 1214 357 24 0 0 chr13 82469074 82469116 -37815196 + (TCCC)n Simple_repeat Simple_repeat 1 42 0 5 1214 7206 100 3 6 chr13 82469122 82470718 -37813594 - L1_Mus2 LINE L1 0 6566 5090 5 1214 4945 93 29 44 chr13 82470716 82471807 -37812505 + L1Md_F3 LINE L1 5588 6634 -4 5 1214 17176 119 14 3 chr13 82471820 82474660 -37809652 - L1Md_F LINE L1 -945 4938 2068 5 1214 32110 52 12 16 chr13 82474659 82479626 -37804686 + L1Md_Gf LINE L1 1 4938 -948 5 1214 228 183 46 77 chr13 82479626 82479691 -37804621 - RMER20A LTR ERVK -268 248 186 5 1214 32110 52 12 16 chr13 82479691 82480344 -37803968 + L1Md_Gf LINE L1 4939 5589 -297 5 1214 8411 38 0 0 chr13 82480344 82481340 -37802972 + L1Md_T LINE L1 5587 6582 0 5 1214 29 0 0 0 chr13 82481342 82481371 -37802941 + AT_rich Low_complexity Low_complexity 1 29 0 5 1214 5179 99 17 0 chr13 82481396 82482235 -37802077 - MusHAL1 LINE L1 -1859 853 1 5 1214 2261 169 14 111 chr13 82482201 82482814 -37801498 - L1Md_F LINE L1 -5380 1236 682 5 1214 207 0 0 0 chr13 82482814 82482837 -37801475 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1214 2261 169 14 111 chr13 82482837 82482854 -37801458 - L1Md_F LINE L1 -5935 681 668 5 1214 324 233 0 11 chr13 82482957 82483048 -37801264 - L1VL2 LINE L1 -6150 185 96 5 1214 369 327 69 52 chr13 82483157 82483331 -37800981 + MER97c DNA MER1_type? 1 177 -913 5 1214 2893 149 10 2 chr13 82483581 82484064 -37800248 + Lx LINE L1 6161 6647 -7 5 1214 372 327 136 19 chr13 82484122 82484282 -37800030 - B3A SINE B2 -6 192 17 5 1214 21 36 0 0 chr13 82484788 82484816 -37799496 + AT_rich Low_complexity Low_complexity 1 28 0 5 1214 25 0 0 0 chr13 82485405 82485430 -37798882 + AT_rich Low_complexity Low_complexity 1 25 0 5 1214 22792 165 12 57 chr13 82485461 82490054 -37794258 + L1_Mus3 LINE L1 699 5023 -860 5 1214 3111 150 25 0 chr13 82490054 82490471 -37793841 + L1_Mus3 LINE L1 6099 6515 -123 5 1214 198 0 0 0 chr13 82490471 82490493 -37793819 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 1214 3111 150 25 0 chr13 82490493 82490602 -37793710 + L1_Mus3 LINE L1 6516 6637 -1 5 1214 22792 124 9 22 chr13 82490602 82492221 -37792091 + L1_Mus3 LINE L1 5024 6637 -1 5 1214 212 122 24 0 chr13 82492294 82492335 -37791977 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 5 1214 22 56 0 0 chr13 82493811 82493847 -37790465 + AT_rich Low_complexity Low_complexity 1 36 0 5 1214 2713 60 8 6 chr13 82496191 82496542 -37787770 + L1Md_F3 LINE L1 6219 6570 -14 5 1214 25 51 0 0 chr13 82496613 82496652 -37787660 + AT_rich Low_complexity Low_complexity 1 39 0 6 1214 1587 211 104 6 chr13 82497205 82497562 -37786750 - MTC LTR MaLR -29 392 1 6 1214 387 318 121 82 chr13 82498334 82498615 -37785697 - MLT1J-int LTR MaLR -37 1350 1059 6 1214 844 335 107 24 chr13 82498669 82499079 -37785233 - MLT1J-int LTR MaLR -454 933 490 6 1214 282 277 24 12 chr13 82499290 82499374 -37784938 + MER20 DNA MER1_type 92 176 -43 6 1214 32 0 0 0 chr13 82500707 82500739 -37783573 + AT_rich Low_complexity Low_complexity 1 32 0 1 1214 3133 61 5 2 chr13 82502202 82502597 -37781715 + MTA_Mm LTR MaLR 1 396 0 2 1214 197 65 32 0 chr13 82502950 82502981 -37781331 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1214 324 0 0 0 chr13 82503021 82503057 -37781255 + (TA)n Simple_repeat Simple_repeat 1 36 0 4 1214 396 0 0 0 chr13 82503057 82503100 -37781212 + (GA)n Simple_repeat Simple_repeat 2 45 0 5 1214 3545 232 89 4 chr13 82503159 82504066 -37780246 - Lx9 LINE L1 -188 7456 6473 6 1214 270 321 104 0 chr13 82504088 82504194 -37780118 - PB1D10 SINE Alu 0 117 1 7 1214 843 213 166 42 chr13 82504553 82504842 -37779470 - ORR1A4 LTR MaLR 0 329 5 8 1214 8739 181 50 74 chr13 82504846 82506855 -37777457 - ORR1A4-int LTR MaLR 0 1963 2 8 1214 1699 139 63 28 chr13 82506856 82507174 -37777138 - ORR1A4 LTR MaLR 0 329 1 8 1214 5104 33 0 0 chr13 82507353 82507965 -37776347 - L1_Mm LINE L1 -1033 4850 4239 9 1214 5112 35 0 0 chr13 82507965 82508567 -37775745 + L1Md_T LINE L1 5981 6582 0 1 1214 31 26 0 0 chr13 82508801 82508839 -37775473 + AT_rich Low_complexity Low_complexity 1 38 0 1 1214 279 0 0 0 chr13 82508898 82508929 -37775383 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1 1214 183 42 0 0 chr13 82509208 82509232 -37775080 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1214 343 312 347 29 chr13 82509640 82509950 -37774362 + MLT1A1 LTR MaLR 1 408 0 1 1214 322 370 94 22 chr13 82509953 82510177 -37774135 - LTR16A1 LTR ERVL -71 385 146 1 1214 213 132 0 0 chr13 82510742 82510780 -37773532 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1214 1732 274 37 42 chr13 82511301 82511868 -37772444 - Tigger8 DNA MER2_type -102 564 1 1 1214 914 263 91 55 chr13 82512199 82512561 -37771751 - MTEb LTR MaLR 0 379 5 1 1214 253 0 26 26 chr13 82512779 82512817 -37771495 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 1 1214 6358 105 19 3 chr13 82512823 82513751 -37770561 - L1_Mus4 LINE L1 -7 6629 5687 2 1214 3083 168 14 21 chr13 82513746 82513917 -37770395 - L1_Mus4 LINE L1 -419 5464 5295 2 1214 1114 71 0 0 chr13 82513917 82514058 -37770254 - B1_Mm SINE Alu -5 142 2 2 1214 3083 168 14 21 chr13 82514058 82514347 -37769965 - L1_Mus4 LINE L1 -589 5294 5016 2 1214 3656 28 0 0 chr13 82514347 82514774 -37769538 - L1Md_T LINE L1 0 6582 6156 2 1214 3083 168 14 21 chr13 82514774 82514889 -37769423 - L1_Mus4 LINE L1 -868 5015 4894 2 1214 8127 86 0 1 chr13 82514884 82516084 -37768228 - L1_Mus2 LINE L1 -616 5950 4752 2 1214 499 137 0 0 chr13 82516085 82516158 -37768154 - B2_Mm2 SINE B2 -121 74 2 2 1214 300 403 67 25 chr13 82516259 82516544 -37767768 - L1M5 LINE L1 -651 5589 5293 2 1214 234 233 191 45 chr13 82516555 82516712 -37767600 - L1MA6 LINE L1 0 6300 6121 2 1214 26 50 0 0 chr13 82517429 82517469 -37766843 + AT_rich Low_complexity Low_complexity 1 40 0 2 1214 198 0 0 0 chr13 82517715 82517737 -37766575 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1214 23 0 0 0 chr13 82520701 82520724 -37763588 + AT_rich Low_complexity Low_complexity 1 23 0 2 1214 292 232 57 14 chr13 82521570 82521640 -37762672 - MIRb SINE MIR -91 177 105 3 1214 1436 272 145 39 chr13 82522173 82522697 -37761615 - Lx8 LINE L1 -5 7468 6881 3 1214 579 29 0 0 chr13 82522697 82522766 -37761546 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1214 1436 272 145 39 chr13 82522766 82522991 -37761321 - Lx8 LINE L1 -593 6880 6639 3 1214 1156 259 53 34 chr13 82523010 82523366 -37760946 + ORR1D1 LTR MaLR 4 366 -8 3 1214 534 281 142 21 chr13 82523387 82523620 -37760692 - Lx8 LINE L1 -859 6614 6354 3 1214 2339 153 41 7 chr13 82523745 82524160 -37760152 - Lx LINE L1 0 6654 6226 3 1214 1008 77 20 1 chr13 82524160 82524313 -37759999 - Lx LINE L1 -718 5936 5781 3 1214 688 111 8 8 chr13 82524313 82524431 -37759881 + Lx LINE L1 6534 6651 -3 3 1214 305 285 14 28 chr13 82524431 82524447 -37759865 - Lx LINE L1 -1693 5780 5765 3 1214 2545 168 26 6 chr13 82524465 82524777 -37759535 + Lx3B LINE L1 5784 6094 -879 3 1214 180 0 0 0 chr13 82524777 82524797 -37759515 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 3 1214 2545 168 26 6 chr13 82524797 82524951 -37759361 + Lx3B LINE L1 6095 6257 -716 3 1214 370 171 0 0 chr13 82524953 82525029 -37759283 + Lx3B LINE L1 6902 6977 -4 3 1214 185 143 27 41 chr13 82525037 82525110 -37759202 + A-rich Low_complexity Low_complexity 2 73 0 3 1214 2972 131 7 4 chr13 82525543 82526005 -37758307 - L1_Mm LINE L1 -64 5819 5357 3 1214 5273 88 4 3 chr13 82526005 82526726 -37757586 + L1_Mus4 LINE L1 5913 6634 -2 4 1214 21 36 0 0 chr13 82527365 82527393 -37756919 + AT_rich Low_complexity Low_complexity 1 28 0 4 1214 305 303 61 0 chr13 82527552 82527651 -37756661 - L3b LINE CR1 -204 278 174 4 1214 2608 52 3 3 chr13 82528435 82528763 -37755549 - L1_Mus1 LINE L1 -2 6565 6238 4 1214 420 20 0 0 chr13 82528911 82528960 -37755352 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1214 428 283 28 0 chr13 82530855 82530961 -37753351 - B1_Mur1 SINE Alu -6 143 35 4 1214 495 297 18 21 chr13 82530975 82531220 -37753092 + L1_Mur3 LINE L1 5254 5528 -772 4 1214 342 0 0 0 chr13 82532414 82532452 -37751860 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1214 364 362 75 24 chr13 82533410 82533744 -37750568 + L1ME2 LINE L1 5599 5949 -235 4 1214 483 312 14 41 chr13 82533844 82533991 -37750321 - ID_B1 SINE B4 -4 220 78 4 1214 600 73 0 0 chr13 82534062 82534144 -37750168 + (CA)n Simple_repeat Simple_repeat 2 83 0 5 1214 1416 251 42 3 chr13 82534426 82534786 -37749526 + ORR1D1 LTR MaLR 1 374 0 5 1214 1430 78 5 0 chr13 82535968 82536160 -37748152 - B2_Mm1a SINE B2 0 193 1 5 1214 418 333 33 28 chr13 82536478 82536691 -37747621 - L1MB1 LINE L1 -149 6040 5827 5 1214 1349 83 28 0 chr13 82536914 82537095 -37747217 + B2_Mm2 SINE B2 3 188 -7 5 1214 23 0 0 0 chr13 82537199 82537222 -37747090 + AT_rich Low_complexity Low_complexity 1 23 0 5 1214 425 336 7 7 chr13 82537238 82537373 -37746939 + B1F2 SINE Alu 13 147 -2 5 1214 1201 284 94 41 chr13 82537404 82537503 -37746809 - L1_Mur2 LINE L1 -2342 3538 3418 5 1214 833 191 135 5 chr13 82537503 82537703 -37746609 - URR1A DNA MER1_type 0 226 1 5 1214 1201 284 94 41 chr13 82537703 82538414 -37745898 - L1_Mur2 LINE L1 -2463 3417 2685 5 1214 229 281 116 8 chr13 82538423 82538552 -37745760 - L1M2 LINE L1 -1358 4785 4643 5 1214 206 88 0 56 chr13 82538798 82538834 -37745478 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1214 289 194 194 72 chr13 82538994 82539133 -37745179 + MTD LTR MaLR 255 410 -9 6 1214 2089 303 64 57 chr13 82539349 82540371 -37743941 - Lx5 LINE L1 -32 7018 5994 6 1214 2718 77 36 0 chr13 82540438 82540802 -37743510 + L1_Mus2 LINE L1 5947 6323 -243 6 1214 6748 108 2 4 chr13 82540802 82542012 -37742300 - L1_Mus4 LINE L1 -129 6507 5303 6 1214 12276 157 8 8 chr13 82542010 82544230 -37740082 + L1_Mus4 LINE L1 3120 5340 -543 6 1214 2254 229 15 11 chr13 82544226 82544757 -37739555 - Lx5 LINE L1 -563 5314 4782 6 1214 384 164 12 1 chr13 82544761 82544856 -37739456 - L1_Mur2 LINE L1 -3236 2647 2553 5 1214 1627 211 9 12 chr13 82544862 82545202 -37739110 - Lx4B LINE L1 -6 7052 6714 6 1214 506 217 8 0 chr13 82545207 82545327 -37738985 + Lx4B LINE L1 5904 6024 -1034 6 1214 2176 123 47 14 chr13 82545321 82545683 -37738629 + Lx4B LINE L1 6319 6692 -366 6 1214 4061 202 21 21 chr13 82545681 82546188 -37738124 - L1_Mur2 LINE L1 -3312 2565 2053 5 1214 327 25 0 0 chr13 82546188 82546228 -37738084 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1214 4061 202 21 21 chr13 82546228 82546696 -37737616 - L1_Mur2 LINE L1 -3825 2052 1590 5 1214 303 354 0 0 chr13 82546707 82546803 -37737509 - PB1D10 SINE Alu -8 109 14 6 1214 241 347 59 33 chr13 82546857 82547009 -37737303 - L1M3c LINE L1 -5845 296 141 6 1214 556 50 25 0 chr13 82547035 82547115 -37737197 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 7 1214 291 351 169 45 chr13 82547466 82547929 -37736383 + L2 LINE L2 676 1195 -2224 7 1214 249 359 0 0 chr13 82547936 82548000 -37736312 - MIR SINE MIR -195 67 4 7 1214 200 200 0 0 chr13 82548000 82548038 -37736274 - MIRc SINE MIR -57 211 174 7 1214 330 380 157 35 chr13 82548122 82548777 -37735535 + L2 LINE L2 1248 1982 -1437 7 1214 1985 123 67 6 chr13 82551123 82551465 -37732847 + Lx LINE L1 6292 6654 0 7 1214 21 0 0 0 chr13 82551538 82551559 -37732753 + AT_rich Low_complexity Low_complexity 1 21 0 7 1214 221 295 49 0 chr13 82552073 82552134 -37732178 - PB1D10 SINE Alu -12 105 42 7 1214 183 162 0 0 chr13 82552507 82552544 -37731768 + T-rich Low_complexity Low_complexity 1 37 0 7 1214 330 340 35 49 chr13 82553163 82553373 -37730939 + MLT1A0 LTR MaLR 117 316 -49 7 1214 349 222 11 0 chr13 82553425 82553515 -37730797 + Lx4B LINE L1 6963 7053 -5 7 1214 1133 259 96 49 chr13 82553845 82554150 -37730162 - MTD LTR MaLR -20 399 74 8 1214 3693 54 24 0 chr13 82554150 82554612 -37729700 - L1_Mus1 LINE L1 0 6567 6095 8 1214 1133 259 96 49 chr13 82554612 82554671 -37729641 - MTD LTR MaLR -346 73 18 8 1214 204 40 0 0 chr13 82554688 82554713 -37729599 + (CAA)n Simple_repeat Simple_repeat 2 26 0 8 1214 1429 243 82 5 chr13 82555019 82555387 -37728925 + MTC LTR MaLR 26 421 0 8 1214 31 68 0 0 chr13 82555463 82555522 -37728790 + AT_rich Low_complexity Low_complexity 1 59 0 8 1214 25 51 0 0 chr13 82557209 82557248 -37727064 + AT_rich Low_complexity Low_complexity 1 39 0 8 1214 310 121 60 8 chr13 82557336 82557453 -37726859 + (TA)n Simple_repeat Simple_repeat 2 124 0 8 1214 272 299 25 17 chr13 82557457 82557576 -37726736 - L1MA6 LINE L1 -120 6171 6052 8 1214 963 300 61 66 chr13 82557622 82558880 -37725432 - L1MA6 LINE L1 -335 5965 4712 8 1214 971 287 43 23 chr13 82559071 82559374 -37724938 - Lx5 LINE L1 -8 7042 6734 8 1214 225 0 0 0 chr13 82560838 82560863 -37723449 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 1214 380 329 28 89 chr13 82560959 82561139 -37723173 - B4A SINE B4 -123 169 1 9 1214 5856 92 36 14 chr13 82561166 82562043 -37722269 + Lx3_Mus LINE L1 6113 7009 0 9 1214 376 375 115 24 chr13 82562107 82562446 -37721866 - L1M5 LINE L1 -1025 5121 4752 9 1214 526 346 80 18 chr13 82564685 82565020 -37719292 + MLT2B1 LTR ERVL 17 469 -98 9 1214 4235 161 326 2 chr13 82565092 82566164 -37718148 - L1_Mur2 LINE L1 -211 5666 4247 9 1214 351 333 50 33 chr13 82566173 82566415 -37717897 - L1VL4 LINE L1 -5875 427 182 9 1214 4716 101 2 0 chr13 82566790 82567680 -37716632 - L1_Mus3 LINE L1 -426 6212 5321 9 1214 2709 88 47 3 chr13 82567680 82568065 -37716247 + L1_Mus3 LINE L1 6216 6617 -21 9 1214 3254 180 100 36 chr13 82568695 82569516 -37714796 + RMER17D LTR ERVK 1 873 -16 9 1214 185 358 36 45 chr13 82569572 82569683 -37714629 + MIR3 SINE MIR 88 197 -11 9 1214 297 336 31 0 chr13 82569933 82570061 -37714251 - MIR SINE MIR -25 237 106 9 1214 700 206 0 0 chr13 82570246 82570377 -37713935 + ORR1C1 LTR MaLR 248 378 0 1 1214 22 56 0 0 chr13 82571143 82571179 -37713133 + AT_rich Low_complexity Low_complexity 1 36 0 1 1214 329 337 95 19 chr13 82572393 82572451 -37711861 + L1MA6 LINE L1 5732 5789 -502 1 1214 306 0 0 0 chr13 82572451 82572485 -37711827 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1214 371 317 85 20 chr13 82572485 82572941 -37711371 + L1MA6 LINE L1 5790 6297 -3 1 1214 889 318 96 24 chr13 82572982 82573317 -37710995 - ORR1E LTR MaLR 0 359 1 1 1214 766 229 98 0 chr13 82573647 82573852 -37710460 - URR1B DNA MER1_type 0 225 1 1 1214 612 298 40 17 chr13 82574296 82574470 -37709842 - ORR1E LTR MaLR -178 181 4 1 1214 658 277 20 2 chr13 82574470 82574661 -37709651 - ORR1E-int LTR MaLR -50 1530 1188 1 1214 684 230 14 85 chr13 82574706 82574929 -37709383 - RMER1B Other Other -1 1065 859 1 1214 205 241 37 0 chr13 82575187 82575241 -37709071 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 1 1215 1153 358 88 52 chr13 82576002 82576351 -37707961 - ORR1E-int LTR MaLR -566 1014 664 1 1215 993 103 7 7 chr13 82576351 82576498 -37707814 - B1_Mus1 SINE Alu 0 148 2 1 1215 1153 358 88 52 chr13 82576498 82576867 -37707445 - ORR1E-int LTR MaLR -917 663 270 1 1215 1476 247 61 28 chr13 82576871 82577263 -37707049 + MTD LTR MaLR 1 405 -14 1 1215 648 325 74 9 chr13 82577274 82577504 -37706808 - ORR1E-int LTR MaLR -1313 267 23 1 1215 299 296 157 0 chr13 82577517 82577632 -37706680 - ORR1E LTR MaLR 0 379 247 1 1215 2188 149 21 8 chr13 82577779 82578157 -37706155 - Lx5 LINE L1 -960 6090 5708 1 1215 429 229 167 0 chr13 82578140 82578284 -37706028 + Lx4B LINE L1 6111 6278 -780 1 1215 1636 104 25 0 chr13 82578267 82578507 -37705805 - L1_Mus3 LINE L1 -272 6366 6121 1 1215 917 174 0 0 chr13 82578491 82578635 -37705677 + Lx5 LINE L1 6236 6379 -671 1 1215 304 83 0 40 chr13 82578623 82578673 -37705639 + Lx4B LINE L1 6451 6498 -560 1 1215 4972 62 3 2 chr13 82579168 82579802 -37704510 - L1Md_F2 LINE L1 0 6582 5948 1 1215 28 71 0 0 chr13 82581077 82581133 -37703179 + AT_rich Low_complexity Low_complexity 1 56 0 1 1215 315 130 0 0 chr13 82581286 82581340 -37702972 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 1 1215 570 124 0 0 chr13 82581340 82581429 -37702883 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 1215 4849 206 97 15 chr13 82581927 82583330 -37700982 + L1_Mur3 LINE L1 1044 2565 -3312 1 1215 440 174 0 11 chr13 82583329 82583416 -37700896 + L1_Mur3 LINE L1 4933 5018 -859 1 1215 9344 224 48 52 chr13 82583447 82584777 -37699535 + L1_Mus4 LINE L1 700 2021 -3862 1 1215 387 0 0 0 chr13 82584783 82584826 -37699486 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 1215 1137 75 0 20 chr13 82584826 82584968 -37699344 - B1_Mus2 SINE Alu -6 141 2 1 1215 9344 213 70 70 chr13 82584968 82589594 -37694718 + L1_Mus4 LINE L1 2022 6636 0 1 1215 994 209 38 34 chr13 82589591 82589854 -37694458 + L1_Mur3 LINE L1 5005 5268 -609 1 1215 4303 70 0 7 chr13 82589833 82590393 -37693919 + L1Md_F2 LINE L1 6005 6560 -22 1 1215 560 154 73 7 chr13 82590407 82590544 -37693768 + L1_Mur2 LINE L1 5228 5373 -504 1 1215 267 343 29 0 chr13 82590544 82590646 -37693666 - MTEb LTR MaLR -234 145 41 1 1215 180 231 74 37 chr13 82590652 82590706 -37693606 + L4 LINE RTE 859 914 -1115 1 1215 182 388 14 29 chr13 82591926 82591995 -37692317 + L2 LINE L2 128 195 -3224 1 1215 1108 82 0 0 chr13 82593919 82594066 -37690246 - B1_Mus2 SINE Alu 0 147 1 1 1215 708 305 156 26 chr13 82594408 82594903 -37689409 - Lx9 LINE L1 -9 7635 7077 1 1215 337 245 64 36 chr13 82597016 82597126 -37687186 + HAL1-3A_ME LINE L1 1976 2088 -770 1 1215 242 301 133 39 chr13 82597383 82597767 -37686545 - L1MDb LINE L1 -4317 2316 1897 1 1215 353 313 45 15 chr13 82597842 82597975 -37686337 - L1MDb LINE L1 -4754 1879 1743 1 1215 6960 104 43 10 chr13 82598098 82599132 -37685180 - Lx LINE L1 0 6654 5587 1 1215 252 86 0 0 chr13 82599216 82599251 -37685061 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1215 1299 197 114 12 chr13 82599450 82599784 -37684528 - ORR1D1 LTR MaLR -2 372 5 1 1215 378 327 18 12 chr13 82599841 82600005 -37684307 - L1MDb LINE L1 -5306 1234 1070 1 1215 1029 302 58 21 chr13 82600183 82600511 -37683801 - MTE2b LTR MaLR -38 341 2 1 1215 2733 60 11 3 chr13 82603278 82603644 -37680668 + L1_Mus3 LINE L1 6270 6638 0 1 1215 1200 7 0 0 chr13 82603646 82603782 -37680530 - L1Md_A LINE L1 -379 5504 5369 1 1215 613 55 0 0 chr13 82603776 82603849 -37680463 + L1Md_A LINE L1 5514 5586 -297 1 1215 7722 23 71 0 chr13 82603849 82604807 -37679505 + L1Md_A LINE L1 5587 6582 0 1 1215 366 80 0 0 chr13 82605430 82605480 -37678832 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 1 1215 28 48 0 0 chr13 82605487 82605529 -37678783 + AT_rich Low_complexity Low_complexity 1 42 0 1 1215 16180 89 6 7 chr13 82606528 82608823 -37675489 - Lx3_Mus LINE L1 -48 5838 3547 1 1215 7444 105 18 35 chr13 82608823 82610007 -37674305 + Lx3_Mus LINE L1 5847 7009 0 1 1215 26 0 0 0 chr13 82610291 82610317 -37673995 + AT_rich Low_complexity Low_complexity 1 26 0 1 1215 277 248 57 41 chr13 82610953 82611075 -37673237 + L1MC4 LINE L1 7709 7832 -210 1 1215 695 340 5 5 chr13 82612006 82612213 -37672099 + B3 SINE B2 1 207 -9 1 1215 238 263 0 0 chr13 82612220 82612296 -37672016 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 1215 22 0 0 0 chr13 82612344 82612366 -37671946 + AT_rich Low_complexity Low_complexity 1 22 0 1 1215 2604 147 80 113 chr13 82612589 82613303 -37671009 + RMER6C LTR ERVK 1 690 0 1 1215 204 245 0 0 chr13 82614051 82614100 -37670212 + T-rich Low_complexity Low_complexity 1 49 0 1 1215 570 29 0 0 chr13 82614114 82614182 -37670130 + (TCC)n Simple_repeat Simple_repeat 3 70 0 1 1215 555 234 20 7 chr13 82614182 82614328 -37669984 - Lx4B LINE L1 -45 7013 6866 1 1215 4472 179 66 2 chr13 82614326 82615431 -37668881 - Lx4B LINE L1 -447 6611 5403 1 1215 216 0 0 0 chr13 82616915 82616939 -37667373 + (TA)n Simple_repeat Simple_repeat 2 25 0 1 1215 212 185 19 0 chr13 82617057 82617111 -37667201 + (CATATA)n Simple_repeat Simple_repeat 3 57 0 1 1215 305 329 38 19 chr13 82617688 82617846 -37666466 + MER46C DNA MER2_type 178 338 0 1 1215 12208 151 35 3 chr13 82618790 82621795 -37662517 - L1_Mus4 LINE L1 0 6636 3539 1 1215 1222 96 45 5 chr13 82621795 82621995 -37662317 - L1_Mus3 LINE L1 -3 6635 6428 1 1215 510 141 0 0 chr13 82621995 82622073 -37662239 - B1_Mus1 SINE Alu -70 78 1 1 1215 317 215 0 132 chr13 82622073 82622086 -37662226 - MT2B LTR ERVL -367 234 156 1 1215 215 286 81 10 chr13 82623627 82623726 -37660586 + PB1D10 SINE Alu 9 114 -3 1 1215 321 360 107 73 chr13 82624156 82624658 -37659654 + MLT1E1 LTR MaLR 92 612 -42 1 1215 654 13 0 0 chr13 82625299 82625374 -37658938 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1215 443 260 39 47 chr13 82626067 82626196 -37658116 - Lx9 LINE L1 -269 7375 7248 1 1215 231 259 0 0 chr13 82626198 82626310 -37658002 + (CA)n Simple_repeat Simple_repeat 2 113 0 1 1215 336 241 5 38 chr13 82626323 82626508 -37657804 + (CA)n Simple_repeat Simple_repeat 1 179 0 1 1215 328 295 81 16 chr13 82627712 82627836 -37656476 + MER70A LTR ERVL 306 437 -35 1 1215 24 85 0 0 chr13 82627900 82627959 -37656353 + AT_rich Low_complexity Low_complexity 1 59 0 1 1215 3477 18 2 0 chr13 82628125 82628520 -37655792 - MTA_Mm LTR MaLR 0 396 1 1 1215 1439 201 7 0 chr13 82630555 82630843 -37653469 - L1Md_F LINE L1 -5602 917 628 1 1215 484 244 16 8 chr13 82630851 82630979 -37653333 - L1Md_F LINE L1 -5813 706 578 1 1215 498 320 23 23 chr13 82631030 82631292 -37653020 - L1VL2 LINE L1 -5981 354 93 1 1215 389 310 194 14 chr13 82631788 82632004 -37652308 - LTR16A1 LTR ERVL 0 456 202 1 1215 184 30 0 57 chr13 82632161 82632196 -37652116 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 1 1215 21 0 0 0 chr13 82632980 82633001 -37651311 + AT_rich Low_complexity Low_complexity 1 21 0 1 1215 21 36 0 0 chr13 82633025 82633053 -37651259 + AT_rich Low_complexity Low_complexity 1 28 0 1 1215 225 200 25 0 chr13 82634347 82634387 -37649925 - B4A SINE B4 -9 283 243 1 1215 306 354 82 97 chr13 82634447 82634704 -37649608 - B4A SINE B4 -39 253 1 1 1215 948 292 103 18 chr13 82635725 82636066 -37648246 + ORR1D2 LTR MaLR 1 370 0 1 1215 2037 126 6 9 chr13 82636098 82636418 -37647894 + L1_Mus3 LINE L1 6316 6634 -4 1 1215 400 271 168 6 chr13 82636619 82636786 -37647526 + L1_Mus2 LINE L1 609 802 -5814 1 1215 30027 112 14 2 chr13 82636795 82642494 -37641818 + L1_Mus2 LINE L1 725 6496 -70 1 1215 392 307 82 63 chr13 82642499 82642740 -37641572 + ORR1E LTR MaLR 116 376 -3 1 1215 495 0 0 0 chr13 82643951 82644006 -37640306 + (GA)n Simple_repeat Simple_repeat 2 56 0 1 1215 213 39 0 0 chr13 82644776 82644802 -37639510 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1215 736 0 19 28 chr13 82645267 82645374 -37638938 + (TTCTC)n Simple_repeat Simple_repeat 5 110 0 1 1215 22 0 0 0 chr13 82646646 82646668 -37637644 + AT_rich Low_complexity Low_complexity 1 22 0 1 1215 248 266 30 30 chr13 82647142 82647208 -37637104 - B1_Mus2 SINE Alu -7 140 75 1 1215 203 102 39 39 chr13 82649118 82649169 -37635143 + (TTATA)n Simple_repeat Simple_repeat 1 51 0 1 1215 641 102 37 52 chr13 82650631 82650766 -37633546 - Lx LINE L1 -5 6649 6517 1 1215 30 0 0 0 chr13 82650825 82650855 -37633457 + AT_rich Low_complexity Low_complexity 1 30 0 1 1215 1370 130 226 44 chr13 82650857 82651285 -37633027 - Lx2 LINE L1 -1 6996 6491 1 1215 1628 237 36 40 chr13 82651284 82651758 -37632554 + Lx5 LINE L1 5641 6112 -938 1 1215 1098 67 0 0 chr13 82652022 82652156 -37632156 + B1_Mus1 SINE Alu 5 138 -10 1 1215 330 45 0 0 chr13 82652156 82652200 -37632112 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 1 1215 288 0 0 0 chr13 82652219 82652251 -37632061 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1215 6244 68 2 0 chr13 82652395 82653228 -37631084 - L1_Mm LINE L1 -3054 2829 1995 1 1215 1099 82 0 0 chr13 82653562 82653709 -37630603 + B1_Mus1 SINE Alu 2 148 0 1 1215 29 28 0 0 chr13 82654079 82654115 -37630197 + AT_rich Low_complexity Low_complexity 1 36 0 1 1215 32 43 0 0 chr13 82654254 82654300 -37630012 + AT_rich Low_complexity Low_complexity 1 46 0 1 1215 8604 140 29 3 chr13 82654398 82656124 -37628188 - Lx2 LINE L1 0 6997 5225 1 1215 1019 163 5 5 chr13 82656120 82656317 -37627995 - L1_Mur1 LINE L1 -526 5351 5155 1 1215 2927 157 14 73 chr13 82656317 82656909 -37627403 + RLTR26 LTR ERVK 86 642 0 1 1215 2052 196 72 11 chr13 82656916 82657375 -37626937 - L1_Mur1 LINE L1 -1065 4821 4335 1 1215 649 207 13 39 chr13 82657370 82657526 -37626786 - Lx LINE L1 0 6997 6846 1 1215 15246 167 20 6 chr13 82657512 82660881 -37623431 - Lx LINE L1 -450 6204 2779 1 1215 3257 141 13 26 chr13 82660850 82661823 -37622489 - L1VL4 LINE L1 -2206 1353 399 1 1215 39498 28 1 6 chr13 82662003 82668386 -37615926 - L1Md_A LINE L1 -2 6580 233 1 1215 616 312 7 7 chr13 82669224 82669379 -37614933 - RSINE1 SINE B4 0 165 11 2 1215 688 323 74 12 chr13 82669568 82669891 -37614421 - MLT2C1 LTR ERVL -50 347 5 2 1215 304 287 41 50 chr13 82670130 82670251 -37614061 - L1MC3 LINE L1 -772 7013 6894 2 1215 417 330 149 24 chr13 82670410 82670860 -37613452 - L1MC3 LINE L1 -1268 6517 6012 2 1215 474 323 32 13 chr13 82672151 82672308 -37612004 - RSINE1 SINE B4 -1 164 5 2 1215 1504 225 53 11 chr13 82672889 82673248 -37611064 - Lx2B LINE L1 -5 6995 6622 2 1215 432 37 0 0 chr13 82673698 82673752 -37610560 + (TG)n Simple_repeat Simple_repeat 2 55 0 2 1215 333 0 0 0 chr13 82673924 82673961 -37610351 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1215 905 320 42 10 chr13 82674107 82674419 -37609893 - MLT2B2 LTR ERVL -186 329 8 2 1215 320 278 138 31 chr13 82675177 82675307 -37609005 + B1F SINE Alu 1 144 -5 2 1215 221 180 0 20 chr13 82675671 82675703 -37608609 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 1215 324 0 0 0 chr13 82675703 82675739 -37608573 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1215 221 180 0 20 chr13 82675739 82675757 -37608555 + (TA)n Simple_repeat Simple_repeat 1 18 0 2 1215 407 306 122 39 chr13 82676094 82676274 -37608038 - MTE2b LTR MaLR -136 243 49 2 1215 21 0 0 0 chr13 82676540 82676561 -37607751 + AT_rich Low_complexity Low_complexity 1 21 0 2 1215 295 132 13 26 chr13 82676760 82676838 -37607474 + T-rich Low_complexity Low_complexity 2 78 0 2 1215 5699 203 53 4 chr13 82677184 82678363 -37605949 + Lx2B LINE L1 5752 6987 -13 2 1215 673 12 23 0 chr13 82678615 82678701 -37605611 + (TC)n Simple_repeat Simple_repeat 1 88 0 2 1215 239 291 0 0 chr13 82678709 82678764 -37605548 - ID4 SINE ID -4 79 25 2 1215 402 74 0 0 chr13 82678844 82678898 -37605414 + (TG)n Simple_repeat Simple_repeat 1 54 0 2 1215 2248 145 3 5 chr13 82678934 82679301 -37605011 + L1_Mm LINE L1 5121 5486 -397 2 1215 446 267 0 0 chr13 82679727 82679828 -37604484 - Lx9 LINE L1 -295 7349 7249 2 1215 459 221 0 3 chr13 82679846 82680137 -37604175 + (TA)n Simple_repeat Simple_repeat 1 290 0 2 1215 269 339 6 6 chr13 82680025 82680194 -37604118 + A-rich Low_complexity Low_complexity 6 174 0 2 1215 1016 249 31 15 chr13 82681777 82682038 -37602274 - MTD LTR MaLR -154 265 1 2 1215 4552 130 97 27 chr13 82682048 82682895 -37601417 - RMER17A2 LTR ERVK 0 906 1 2 1215 225 389 70 16 chr13 82682959 82683087 -37601225 - MIRm SINE MIR -128 148 14 2 1215 275 200 92 13 chr13 82683684 82683760 -37600552 - MTC LTR MaLR 0 421 340 2 1215 752 353 50 35 chr13 82683815 82684153 -37600159 + MTE-int LTR MaLR 2 344 -1236 2 1215 364 196 65 9 chr13 82684292 82684400 -37599912 + Lx9 LINE L1 7531 7644 0 2 1215 540 106 0 0 chr13 82684434 82684519 -37599793 + (TG)n Simple_repeat Simple_repeat 1 85 0 2 1215 25 75 0 0 chr13 82684653 82684706 -37599606 + AT_rich Low_complexity Low_complexity 1 53 0 2 1215 10579 121 11 17 chr13 82686032 82688558 -37595754 + L1VL4 LINE L1 29 2540 -1019 2 1215 3174 14 0 0 chr13 82688554 82688918 -37595394 + L1Md_T LINE L1 5223 5586 -297 2 1215 8374 35 0 0 chr13 82688918 82689914 -37594398 + L1Md_T LINE L1 5587 6582 0 2 1215 235 29 0 0 chr13 82689914 82689949 -37594363 + L1_Mm LINE L1 2883 2917 -2966 2 1215 348 239 45 0 chr13 82690055 82690143 -37594169 + Lx7 LINE L1 4851 4942 -938 2 1215 980 234 32 94 chr13 82690124 82690464 -37593848 + Lx7 LINE L1 5657 5975 -1721 2 1215 1915 261 38 98 chr13 82690679 82691363 -37592949 + Lx7 LINE L1 6719 7361 -335 2 1215 414 57 0 0 chr13 82691366 82691419 -37592893 + (TC)n Simple_repeat Simple_repeat 2 54 0 2 1215 241 288 0 0 chr13 82691419 82691478 -37592834 + (TA)n Simple_repeat Simple_repeat 1 59 0 2 1215 30 59 0 0 chr13 82691515 82691566 -37592746 + AT_rich Low_complexity Low_complexity 1 51 0 2 1215 360 0 0 0 chr13 82691637 82691677 -37592635 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 2 1215 234 116 0 0 chr13 82691730 82691773 -37592539 + (TAGG)n Simple_repeat Simple_repeat 1 43 0 2 1215 487 239 30 0 chr13 82691789 82691923 -37592389 + Lx6 LINE L1 7323 7460 0 2 1215 1587 58 5 0 chr13 82692068 82692275 -37592037 - L1_Mus1 LINE L1 0 6567 6360 2 1215 555 78 0 0 chr13 82692369 82692446 -37591866 + (TCCC)n Simple_repeat Simple_repeat 4 80 0 2 1215 207 0 0 0 chr13 82692742 82692765 -37591547 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2 1215 27 0 0 0 chr13 82692919 82692946 -37591366 + AT_rich Low_complexity Low_complexity 1 27 0 2 1215 340 170 0 0 chr13 82693364 82693417 -37590895 - MusHAL1 LINE L1 -1123 1589 1537 2 1215 1556 82 14 14 chr13 82693419 82693617 -37590695 + L1_Mus4 LINE L1 5662 5859 -777 2 1215 3037 101 35 16 chr13 82693617 82694103 -37590209 + L1_Mus4 LINE L1 6142 6636 0 2 1215 1556 82 14 14 chr13 82694103 82694127 -37590185 + L1_Mus4 LINE L1 5860 5883 -753 2 1215 6575 41 1 0 chr13 82694206 82695005 -37589307 - L1Md_A LINE L1 0 6582 5783 2 1215 8475 30 2 0 chr13 82695005 82696688 -37587624 - L1Md_T LINE L1 -1 6581 4896 2 1215 761 42 0 0 chr13 82696683 82696779 -37587533 + L1Md_A LINE L1 138 233 -6491 2 1215 1068 191 33 54 chr13 82697256 82697525 -37586787 + RMER1B Other Other 802 1052 -14 2 1215 282 29 0 0 chr13 82698081 82698116 -37586196 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1215 207 0 0 0 chr13 82698812 82698835 -37585477 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1215 1090 82 7 0 chr13 82698845 82698991 -37585321 - B1_Mus2 SINE Alu 0 147 1 2 1215 1890 210 64 66 chr13 82699220 82699781 -37584531 - RLTR20B3 LTR ERVK -13 564 5 2 1215 22 0 0 0 chr13 82699903 82699925 -37584387 + AT_rich Low_complexity Low_complexity 1 22 0 2 1215 23 68 0 0 chr13 82700555 82700599 -37583713 + AT_rich Low_complexity Low_complexity 1 44 0 2 1215 31 58 0 0 chr13 82700839 82700891 -37583421 + AT_rich Low_complexity Low_complexity 1 52 0 2 1215 27 0 0 0 chr13 82700944 82700971 -37583341 + AT_rich Low_complexity Low_complexity 1 27 0 2 1215 455 306 127 25 chr13 82703309 82703554 -37580758 - MLT1A0 LTR MaLR -40 325 56 2 1215 317 317 96 103 chr13 82704348 82704640 -37579672 + B4A SINE B4 3 292 0 2 1215 1014 157 0 0 chr13 82704662 82704840 -37579472 + GA-rich Low_complexity Low_complexity 2 179 0 2 1215 232 85 20 41 chr13 82704842 82704891 -37579421 + (GGA)n Simple_repeat Simple_repeat 3 50 0 2 1216 513 286 77 20 chr13 82707210 82707406 -37576906 - B3 SINE B2 -9 207 1 2 1216 1918 131 0 16 chr13 82707469 82707788 -37576524 + Lx2 LINE L1 6681 6994 -3 2 1216 297 0 0 0 chr13 82707796 82707829 -37576483 + (TA)n Simple_repeat Simple_repeat 2 34 0 2 1216 396 0 0 0 chr13 82707830 82707874 -37576438 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1216 276 30 0 0 chr13 82709258 82709291 -37575021 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 1216 417 256 57 51 chr13 82709470 82709662 -37574650 - Lx8 LINE L1 -1685 5959 5767 2 1216 848 162 22 87 chr13 82709677 82709860 -37574452 - B2_Mm2 SINE B2 -24 171 1 2 1216 1028 291 30 64 chr13 82709861 82710364 -37573948 - Lx8 LINE L1 -89 5791 5306 2 1216 2631 317 76 39 chr13 82710369 82711716 -37572596 + Lx8 LINE L1 6077 7473 0 2 1216 397 102 0 33 chr13 82711737 82711798 -37572514 + PB1D9 SINE Alu 1 59 -61 2 1216 270 321 0 0 chr13 82711801 82711913 -37572399 + GA-rich Low_complexity Low_complexity 68 179 0 2 1216 721 76 9 28 chr13 82711928 82712036 -37572276 + B1_Mus2 SINE Alu 42 147 0 2 1216 740 186 13 0 chr13 82712037 82712193 -37572119 + GA-rich Low_complexity Low_complexity 3 160 0 2 1216 1193 274 51 73 chr13 82712815 82713308 -37571004 - Lx7 LINE L1 -232 7464 6983 2 1216 313 305 117 32 chr13 82713556 82713837 -37570475 + L1ME1 LINE L1 5859 6163 -16 2 1216 291 54 0 0 chr13 82715133 82715170 -37569142 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1216 481 344 15 38 chr13 82715188 82715321 -37568991 - RSINE1 SINE B4 -15 150 21 2 1216 685 265 23 74 chr13 82715536 82715752 -37568560 + B3 SINE B2 7 211 -5 2 1216 22 0 0 0 chr13 82715895 82715917 -37568395 + AT_rich Low_complexity Low_complexity 1 22 0 2 1216 22 56 0 0 chr13 82715982 82716018 -37568294 + AT_rich Low_complexity Low_complexity 1 36 0 2 1216 267 54 0 0 chr13 82717242 82717279 -37567033 + (T)n Simple_repeat Simple_repeat 1 37 0 2 1216 236 176 29 14 chr13 82717779 82717848 -37566464 + T-rich Low_complexity Low_complexity 1 70 0 2 1216 1137 82 0 0 chr13 82717848 82717995 -37566317 - B1_Mus1 SINE Alu -1 147 1 2 1216 276 320 112 48 chr13 82718102 82718289 -37566023 + B4A SINE B4 2 200 -92 2 1216 195 114 0 0 chr13 82718339 82718374 -37565938 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1216 274 217 43 0 chr13 82718410 82718502 -37565810 + GA-rich Low_complexity Low_complexity 2 97 0 2 1216 217 246 92 50 chr13 82720729 82720849 -37563463 - MIR SINE MIR -38 224 100 2 1216 22 56 0 0 chr13 82721184 82721220 -37563092 + AT_rich Low_complexity Low_complexity 1 36 0 2 1216 982 225 9 9 chr13 82722230 82722445 -37561867 + RLTR16 LTR ERVK 1 215 -290 2 1216 9282 93 7 1 chr13 82722445 82723794 -37560518 - MusHAL1 LINE L1 -362 2350 994 2 1216 360 58 0 0 chr13 82723796 82723889 -37560423 + L1_Mus3 LINE L1 6575 6638 0 2 1216 354 291 44 15 chr13 82723971 82724107 -37560205 + RLTR16 LTR ERVK 344 483 -22 2 1216 498 118 0 0 chr13 82724695 82724788 -37559524 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 1216 549 0 0 0 chr13 82725635 82725696 -37558616 + (TC)n Simple_repeat Simple_repeat 2 62 0 2 1216 387 73 0 0 chr13 82726251 82726306 -37558006 + (TG)n Simple_repeat Simple_repeat 1 55 0 2 1216 879 10 0 0 chr13 82726306 82726405 -37557907 + (GA)n Simple_repeat Simple_repeat 1 100 0 2 1216 2531 125 10 10 chr13 82726459 82726864 -37557448 + L1_Mus3 LINE L1 6234 6638 0 2 1216 247 252 100 23 chr13 82728392 82728522 -37555790 - L1MC4a LINE L1 -1398 6484 6345 2 1216 10351 161 36 5 chr13 82728539 82731437 -37552875 - Lx3C LINE L1 -2 6974 3988 3 1216 26 0 0 0 chr13 82731452 82731478 -37552834 + AT_rich Low_complexity Low_complexity 1 26 0 3 1216 257 253 93 0 chr13 82731912 82731987 -37552325 - MIRc SINE MIR -122 146 65 3 1216 233 287 147 9 chr13 82732777 82732893 -37551419 + MIRc SINE MIR 137 268 0 3 1216 21 71 0 0 chr13 82734389 82734431 -37549881 + AT_rich Low_complexity Low_complexity 1 42 0 3 1216 272 379 8 46 chr13 82735199 82735329 -37548983 + LFSINE_Vert SINE SINE 329 453 -6 3 1216 439 20 0 0 chr13 82735847 82735896 -37548416 + L1Md_F2 LINE L1 5538 5586 -297 3 1216 8075 33 29 0 chr13 82735896 82736863 -37547449 + L1Md_F2 LINE L1 5587 6581 -1 3 1216 1183 224 100 8 chr13 82737322 82737682 -37546630 - Lx9 LINE L1 -4 7640 7248 3 1216 32 26 0 0 chr13 82738558 82738597 -37545715 + AT_rich Low_complexity Low_complexity 1 39 0 3 1216 368 248 55 15 chr13 82738826 82739008 -37545304 - L1M5 LINE L1 -1421 4725 4534 3 1216 372 111 0 0 chr13 82739590 82739653 -37544659 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1216 387 89 0 0 chr13 82740257 82740313 -37543999 + (TA)n Simple_repeat Simple_repeat 1 56 0 3 1216 259 222 0 0 chr13 82741294 82741357 -37542955 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1216 581 165 9 18 chr13 82741453 82741564 -37542748 + B1_Mur4 SINE Alu 1 110 -40 3 1216 449 258 58 36 chr13 82741564 82741589 -37542723 + B4 SINE B4 86 224 -68 3 1216 468 0 0 0 chr13 82741595 82741647 -37542665 + (TA)n Simple_repeat Simple_repeat 2 53 0 3 1216 361 358 29 14 chr13 82743110 82743249 -37541063 + RMER15 LTR ERVL 309 449 -126 3 1216 290 62 45 30 chr13 82743249 82743316 -37540996 + (CAAAAA)n Simple_repeat Simple_repeat 6 73 0 3 1216 1239 196 17 28 chr13 82743698 82743766 -37540546 + L1_Mur2 LINE L1 4855 4919 -958 3 1216 2287 199 78 59 chr13 82743766 82744443 -37539869 + RMER6C LTR ERVK 1 690 0 3 1216 1239 196 17 28 chr13 82744443 82744663 -37539649 + L1_Mur2 LINE L1 4920 5140 -737 3 1216 1107 269 113 34 chr13 82744673 82744832 -37539480 - RMER20B LTR ERVK -29 598 441 3 1216 2499 130 22 10 chr13 82744832 82745236 -37539076 - RLTR9E LTR ERVK 0 409 1 3 1216 1107 277 247 19 chr13 82745236 82745575 -37538737 - RMER20B LTR ERVK -187 440 10 3 1216 470 228 15 0 chr13 82745588 82745724 -37538588 + L1_Mur2 LINE L1 5172 5309 -571 3 1216 22 88 0 0 chr13 82745940 82745997 -37538315 + AT_rich Low_complexity Low_complexity 1 57 0 3 1216 300 188 80 0 chr13 82746058 82746170 -37538142 - Lx4B LINE L1 -916 6142 6022 3 1216 26 0 0 0 chr13 82746220 82746246 -37538066 + AT_rich Low_complexity Low_complexity 1 26 0 3 1216 261 156 156 0 chr13 82746277 82746373 -37537939 - Lx9 LINE L1 0 7644 7534 3 1216 14281 174 63 107 chr13 82746375 82749321 -37534991 + Lx4B LINE L1 2138 5221 -656 3 1216 2670 31 0 0 chr13 82749321 82749644 -37534668 - IAPEY2_LTR LTR ERVK 0 357 35 3 1216 14281 174 63 107 chr13 82749644 82749701 -37534611 + Lx4B LINE L1 5222 5282 -595 3 1216 1171 77 0 12 chr13 82749701 82749872 -37534440 + L1_Mus2 LINE L1 6395 6563 -3 3 1216 14281 190 42 75 chr13 82749872 82751665 -37532647 + Lx4B LINE L1 5283 7054 -4 3 1216 205 29 59 0 chr13 82751679 82751713 -37532599 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 3 1216 24 0 0 0 chr13 82752559 82752583 -37531729 + AT_rich Low_complexity Low_complexity 1 24 0 3 1216 1465 190 48 102 chr13 82754274 82754648 -37529664 - ORR1B1 LTR MaLR 0 394 41 3 1216 47 44 0 0 chr13 82754825 82754893 -37529419 + AT_rich Low_complexity Low_complexity 1 68 0 3 1216 1108 82 0 0 chr13 82755289 82755435 -37528877 + B1_Mus1 SINE Alu 2 147 -1 3 1216 393 39 0 0 chr13 82755435 82755486 -37528826 + (CCAA)n Simple_repeat Simple_repeat 2 52 0 3 1216 268 355 51 57 chr13 82755564 82755740 -37528572 - B3A SINE B2 -15 183 9 3 1216 685 152 0 8 chr13 82756679 82756812 -37527500 - Lx2 LINE L1 -1 6996 6865 3 1216 261 279 15 0 chr13 82756927 82756995 -37527317 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 3 1216 297 0 0 0 chr13 82758449 82758482 -37525830 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1216 22 56 0 0 chr13 82759570 82759606 -37524706 + AT_rich Low_complexity Low_complexity 1 36 0 3 1216 6614 175 14 44 chr13 82761515 82763400 -37520912 + Lx2B LINE L1 4539 6390 -610 3 1216 6801 119 23 15 chr13 82763397 82765024 -37519288 + Lx3B LINE L1 5005 6645 -328 3 1216 21 36 0 0 chr13 82765027 82765055 -37519257 + AT_rich Low_complexity Low_complexity 1 28 0 3 1216 24 67 0 0 chr13 82765512 82765557 -37518755 + AT_rich Low_complexity Low_complexity 1 45 0 3 1216 227 234 0 60 chr13 82765671 82765721 -37518591 - L2c LINE L2 -10 3377 3331 3 1216 660 181 273 6 chr13 82766711 82766872 -37517440 - B3 SINE B2 -10 206 3 3 1216 5736 139 26 36 chr13 82767354 82767792 -37516520 - L1_Mm LINE L1 -376 5507 5065 3 1216 2576 105 30 22 chr13 82767792 82768192 -37516120 + RLTR9D LTR ERVK 1 403 0 3 1216 5736 139 26 36 chr13 82768192 82768796 -37515516 - L1_Mm LINE L1 -819 5064 4476 3 1216 7202 105 11 3 chr13 82768793 82769924 -37514388 + L1_Mus3 LINE L1 5499 6638 0 3 1216 393 350 86 22 chr13 82770226 82770448 -37513864 + B4A SINE B4 1 236 -56 3 1216 504 0 0 0 chr13 82770947 82771003 -37513309 + (TTTA)n Simple_repeat Simple_repeat 3 58 0 3 1216 15734 180 108 63 chr13 82771003 82773881 -37510431 - Lx5 LINE L1 -1017 6033 2964 3 1216 255 61 0 0 chr13 82773881 82773914 -37510398 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3 1216 15734 179 114 66 chr13 82773914 82775503 -37508809 - Lx5 LINE L1 -2914 2963 1352 3 1216 659 75 11 0 chr13 82775528 82775622 -37508690 + (TTCC)n Simple_repeat Simple_repeat 2 96 0 3 1216 447 68 0 0 chr13 82775622 82775681 -37508631 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 1216 3896 235 8 53 chr13 82775700 82776683 -37507629 - Lx2B LINE L1 -13 6987 6049 3 1216 373 136 4 10 chr13 82776673 82776784 -37507528 - Lx5 LINE L1 -5677 1307 1195 3 1216 602 116 0 0 chr13 82776792 82776887 -37507425 + Lx2 LINE L1 6889 6983 -14 3 1216 463 130 0 0 chr13 82776917 82776986 -37507326 - Lx2 LINE L1 -120 6877 6809 3 1216 712 202 35 17 chr13 82776984 82777167 -37507145 - Lx2 LINE L1 -406 6591 6395 3 1216 3870 107 34 0 chr13 82777280 82777843 -37506469 - L1_Mus3 LINE L1 0 6638 6057 3 1216 24 0 0 0 chr13 82777931 82777955 -37506357 + AT_rich Low_complexity Low_complexity 1 24 0 3 1216 200 297 72 62 chr13 82778790 82778887 -37505425 + MIRm SINE MIR 179 276 0 3 1216 1554 187 15 73 chr13 82778956 82779297 -37505015 + ORR1A4 LTR MaLR 1 321 -8 3 1216 925 337 48 90 chr13 82779435 82779946 -37504366 + Lx9 LINE L1 6470 6928 -716 3 1216 3712 76 2 2 chr13 82779946 82780434 -37503878 - L1_Mus1 LINE L1 -8 6559 6072 3 1216 925 341 46 84 chr13 82780434 82780899 -37503413 + Lx9 LINE L1 6929 7375 -269 3 1216 21 36 0 0 chr13 82781365 82781393 -37502919 + AT_rich Low_complexity Low_complexity 1 28 0 3 1216 344 231 0 0 chr13 82781412 82781477 -37502835 + ID4 SINE ID 8 72 -11 3 1216 5724 56 1 24 chr13 82781493 82782245 -37502067 + L1Md_F2 LINE L1 5848 6582 0 3 1216 8980 9 0 0 chr13 82782970 82784342 -37499970 - L1Md_T LINE L1 0 6582 5245 3 1216 27 62 0 0 chr13 82784568 82784616 -37499696 + AT_rich Low_complexity Low_complexity 1 48 0 3 1216 22 35 0 0 chr13 82784703 82784732 -37499580 + AT_rich Low_complexity Low_complexity 1 29 0 3 1216 25 0 0 0 chr13 82785038 82785063 -37499249 + AT_rich Low_complexity Low_complexity 1 25 0 3 1216 369 350 36 14 chr13 82785348 82785487 -37498825 - B3A SINE B2 -30 168 27 3 1216 212 218 55 0 chr13 82785562 82785617 -37498695 - B4 SINE B4 -233 59 2 3 1216 26 50 0 0 chr13 82786955 82786995 -37497317 + AT_rich Low_complexity Low_complexity 1 40 0 3 1216 553 268 26 72 chr13 82786995 82787148 -37497164 + RSINE1 SINE B4 12 157 -8 3 1216 368 16 66 0 chr13 82787149 82787210 -37497102 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 1216 2517 107 31 27 chr13 82787246 82787659 -37496653 - L1_Mus3 LINE L1 0 6638 6224 3 1216 5246 109 21 46 chr13 82788042 82788954 -37495358 - RMER17D LTR ERVK 0 889 1 3 1216 2149 158 55 34 chr13 82789607 82789915 -37494397 + Lx3A LINE L1 6555 6859 -122 3 1216 369 0 0 0 chr13 82789915 82789956 -37494356 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1216 2149 158 55 34 chr13 82789956 82790065 -37494247 + Lx3A LINE L1 6860 6980 -1 3 1216 4631 96 21 9 chr13 82790433 82791103 -37493209 + Lx3_Mus LINE L1 6332 7009 0 3 1216 296 24 0 24 chr13 82791570 82791612 -37492700 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 3 1216 343 353 32 16 chr13 82791796 82791986 -37492326 + B3A SINE B2 4 196 -2 3 1216 7624 71 3 1 chr13 82792151 82793144 -37491168 + L1Md_F2 LINE L1 5587 6581 -1 3 1216 423 304 68 72 chr13 82793181 82794014 -37490298 + L1M2 LINE L1 4116 4945 -1198 3 1216 217 250 0 0 chr13 82794020 82794076 -37490236 + A-rich Low_complexity Low_complexity 1 56 0 3 1216 227 289 103 0 chr13 82794076 82794232 -37490080 + L1M2 LINE L1 4948 5119 -1024 3 1216 273 217 0 0 chr13 82794363 82794423 -37489889 + L1_Mur3 LINE L1 5351 5410 -470 3 1216 1087 159 11 0 chr13 82794468 82794650 -37489662 + B2_Mm1t SINE B2 1 184 -9 3 1216 2493 201 56 44 chr13 82794696 82795378 -37488934 + RMER6C LTR ERVK 1 690 0 3 1216 3111 116 2 0 chr13 82795446 82795896 -37488416 - Lx2 LINE L1 -60 5823 5373 3 1216 4753 140 40 4 chr13 82795887 82796662 -37487650 + Lx2 LINE L1 5841 6643 -354 3 1216 1280 115 43 9 chr13 82796662 82796872 -37487440 + Lx2 LINE L1 6775 6991 -6 3 1216 580 288 88 30 chr13 82797287 82797875 -37486437 + Lx8 LINE L1 2879 3529 -2318 3 1216 554 257 75 35 chr13 82798023 82798249 -37486063 + Lx8 LINE L1 5309 5543 -337 3 1216 496 174 0 0 chr13 82798305 82798391 -37485921 + Lx4B LINE L1 6249 6334 -724 3 1216 1458 323 100 37 chr13 82798434 82799405 -37484907 + Lx8 LINE L1 5635 6666 -807 3 1216 272 303 103 32 chr13 82799494 82799620 -37484692 + Lx8 LINE L1 7174 7308 -165 3 1216 261 0 0 0 chr13 82799620 82799649 -37484663 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 3 1216 848 342 133 23 chr13 82799943 82800463 -37483849 + Lx8 LINE L1 6538 7114 -359 3 1216 228 278 36 36 chr13 82800658 82800770 -37483542 + L1PB4 LINE L1 5850 5961 -195 3 1216 573 88 0 0 chr13 82800787 82800867 -37483445 + (TAGA)n Simple_repeat Simple_repeat 4 83 0 3 1216 316 337 85 27 chr13 82801136 82801395 -37482917 - L1MEg LINE L1 -1556 4590 4317 3 1216 192 77 0 0 chr13 82801634 82801660 -37482652 + (TC)n Simple_repeat Simple_repeat 2 27 0 3 1216 186 71 0 0 chr13 82801660 82801688 -37482624 + (CA)n Simple_repeat Simple_repeat 2 29 0 3 1216 276 100 0 0 chr13 82801688 82801728 -37482584 + (TA)n Simple_repeat Simple_repeat 2 41 0 4 1216 765 275 49 79 chr13 82802064 82802620 -37481692 - L1MEg LINE L1 -4385 1857 1319 3 1216 21 36 0 0 chr13 82802766 82802794 -37481518 + AT_rich Low_complexity Low_complexity 1 28 0 4 1216 470 319 25 31 chr13 82803021 82803235 -37481077 - B3A SINE B2 0 216 1 4 1216 301 279 0 31 chr13 82803739 82803835 -37480477 - Lx9 LINE L1 -448 7196 7104 4 1216 208 121 0 0 chr13 82803862 82803895 -37480417 + (TATATG)n Simple_repeat Simple_repeat 1 33 0 4 1216 1194 27 0 40 chr13 82804405 82804557 -37479755 - B1_Mm SINE Alu -1 146 1 4 1216 29 28 0 0 chr13 82804562 82804598 -37479714 + AT_rich Low_complexity Low_complexity 1 36 0 4 1216 202 164 32 32 chr13 82805012 82805075 -37479237 + (TTTG)n Simple_repeat Simple_repeat 3 65 0 4 1216 1196 249 90 43 chr13 82805204 82805694 -37478618 - L1_Rod LINE L1 -238 5609 5097 4 1216 2246 254 84 18 chr13 82805707 82805852 -37478460 - Lx9 LINE L1 -7 7637 7491 4 1216 180 111 0 0 chr13 82805852 82805879 -37478433 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1216 2246 254 84 18 chr13 82805879 82806494 -37477818 - Lx9 LINE L1 -154 7490 6828 4 1216 1370 254 83 21 chr13 82806505 82806844 -37477468 - L1_Rod LINE L1 -767 5080 4720 4 1216 204 67 0 0 chr13 82806844 82806874 -37477438 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1216 1370 262 81 21 chr13 82806874 82807167 -37477145 - L1_Rod LINE L1 -1369 4771 4471 4 1216 891 223 20 10 chr13 82807178 82807382 -37476930 + Lx9 LINE L1 5621 5826 -21 4 1216 209 235 12 0 chr13 82807697 82807782 -37476530 + (TA)n Simple_repeat Simple_repeat 1 86 0 4 1216 360 0 0 0 chr13 82807782 82807822 -37476490 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1216 693 323 95 3 chr13 82807865 82808148 -37476164 + Lx9 LINE L1 6399 6707 -937 4 1216 528 140 0 0 chr13 82808153 82808260 -37476052 + (TG)n Simple_repeat Simple_repeat 2 108 0 4 1216 579 262 93 10 chr13 82808266 82808470 -37475842 + Lx9 LINE L1 6749 6969 -675 4 1216 21 0 0 0 chr13 82808850 82808871 -37475441 + AT_rich Low_complexity Low_complexity 1 21 0 4 1216 23 68 0 0 chr13 82809010 82809054 -37475258 + AT_rich Low_complexity Low_complexity 1 44 0 4 1216 32 0 0 0 chr13 82811075 82811107 -37473205 + AT_rich Low_complexity Low_complexity 1 32 0 4 1216 276 30 0 0 chr13 82811375 82811408 -37472904 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 4 1216 721 109 24 40 chr13 82811436 82811560 -37472752 + Lx LINE L1 5960 6081 -573 4 1216 723 163 14 0 chr13 82811564 82811705 -37472607 - L1_Mur1 LINE L1 -1833 4053 3911 4 1216 5192 151 2 13 chr13 82811706 82812563 -37471749 + Lx2 LINE L1 6144 6991 -6 4 1216 232 308 90 59 chr13 82812574 82812864 -37471448 + Lx9 LINE L1 7321 7619 -25 4 1216 40 59 0 0 chr13 82813023 82813091 -37471221 + AT_rich Low_complexity Low_complexity 1 68 0 4 1216 350 350 10 10 chr13 82813159 82813263 -37471049 + ID_B1 SINE B4 113 216 -8 4 1216 519 304 16 6 chr13 82813473 82813655 -37470657 - Lx9 LINE L1 -639 7005 6822 4 1216 477 308 13 9 chr13 82813652 82813889 -37470423 + Lx7 LINE L1 5729 5967 -1677 4 1216 263 203 0 13 chr13 82814084 82814159 -37470153 + (TA)n Simple_repeat Simple_repeat 2 75 0 4 1216 802 254 20 30 chr13 82814349 82814552 -37469760 + B3 SINE B2 11 211 -5 4 1216 225 0 0 0 chr13 82814834 82814859 -37469453 + (TAA)n Simple_repeat Simple_repeat 2 26 0 4 1216 252 86 0 0 chr13 82814968 82815003 -37469309 - U2 snRNA snRNA -153 35 1 4 1216 222 324 56 0 chr13 82815176 82815247 -37469065 + PB1D9 SINE Alu 9 83 -37 4 1216 484 372 137 4 chr13 82815243 82815470 -37468842 + B4A SINE B4 36 292 0 4 1216 2205 172 40 21 chr13 82815538 82816229 -37468083 - RMER17A LTR ERVK 0 751 1 4 1216 425 299 65 61 chr13 82816234 82816448 -37467864 - L1MB8 LINE L1 -204 5974 5760 4 1216 425 281 149 0 chr13 82816460 82816574 -37467738 - RSINE1 SINE B4 -8 157 27 4 1216 320 267 122 30 chr13 82816815 82817033 -37467279 - L1MB8 LINE L1 -676 5488 5255 4 1216 2743 189 77 17 chr13 82817420 82818021 -37466291 + RMER6C LTR ERVK 4 640 -50 4 1216 558 0 0 0 chr13 82818021 82818083 -37466229 + (TC)n Simple_repeat Simple_repeat 1 62 0 4 1216 333 0 0 0 chr13 82818083 82818119 -37466193 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1216 2437 159 25 194 chr13 82818119 82818893 -37465419 - RMER6C LTR ERVK -47 643 1 4 1216 273 29 0 0 chr13 82818909 82818943 -37465369 + (TTCTC)n Simple_repeat Simple_repeat 2 35 0 4 1216 477 0 0 0 chr13 82818943 82818996 -37465316 + (TTTC)n Simple_repeat Simple_repeat 4 56 0 4 1216 537 271 108 27 chr13 82818997 82819247 -37465065 - Lx6 LINE L1 -726 6734 6263 4 1216 2573 203 16 7 chr13 82819254 82819825 -37464487 + L1_Mur3 LINE L1 3625 4200 -1680 4 1216 601 253 19 0 chr13 82819830 82819984 -37464328 + Lx6 LINE L1 7128 7284 -176 4 1216 501 17 0 0 chr13 82820955 82821013 -37463299 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1216 21 0 0 0 chr13 82821216 82821237 -37463075 + AT_rich Low_complexity Low_complexity 1 21 0 4 1216 472 256 45 30 chr13 82821382 82821515 -37462797 - MER3 DNA MER1_type -10 199 65 4 1216 951 135 0 0 chr13 82821612 82821768 -37462544 + (TTTC)n Simple_repeat Simple_repeat 4 159 0 4 1216 21 57 0 0 chr13 82821929 82821964 -37462348 + AT_rich Low_complexity Low_complexity 1 35 0 4 1216 688 250 39 74 chr13 82822392 82822703 -37461609 - Lx7 LINE L1 -9 7687 7388 4 1216 264 111 0 0 chr13 82822703 82822748 -37461564 + (TG)n Simple_repeat Simple_repeat 2 46 0 4 1216 484 188 162 0 chr13 82822749 82822866 -37461446 - L1_Mur2 LINE L1 -353 5524 5389 4 1216 4080 246 59 11 chr13 82822936 82823984 -37460328 - Lx7 LINE L1 -333 7363 6266 4 1216 10367 94 22 8 chr13 82824513 82827160 -37457152 - Lx3_Mus LINE L1 -1 7008 4332 4 1216 37911 31 0 0 chr13 82827159 82833698 -37450614 - L1Md_T LINE L1 0 6585 1 4 1216 20045 108 37 14 chr13 82833699 82837413 -37446899 - Lx3_Mus LINE L1 -1540 4346 208 4 1217 221 171 0 0 chr13 82837925 82837966 -37446346 + A-rich Low_complexity Low_complexity 1 41 0 4 1217 429 36 0 0 chr13 82838733 82838788 -37445524 + (CATA)n Simple_repeat Simple_repeat 2 56 0 4 1217 365 343 94 18 chr13 82839099 82839598 -37444714 - L1MA8 LINE L1 -387 5904 5368 4 1217 265 309 100 61 chr13 82839764 82839872 -37444440 + L1MA6 LINE L1 6038 6155 -145 4 1217 1676 26 0 0 chr13 82839872 82840065 -37444247 + B2_Mm1t SINE B2 1 193 0 4 1217 265 309 100 61 chr13 82840065 82840187 -37444125 + L1MA6 LINE L1 6156 6277 -23 4 1217 605 267 20 51 chr13 82840398 82840595 -37443717 + B3A SINE B2 2 192 -6 4 1217 321 26 0 0 chr13 82840599 82840637 -37443675 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1217 936 139 12 0 chr13 82843912 82844078 -37440234 - Lx3A LINE L1 -6 6975 6808 4 1217 233 193 0 34 chr13 82844354 82844413 -37439899 + Zaphod DNA Tip100 2116 2172 -1859 4 1217 335 286 45 63 chr13 82844420 82844707 -37439605 + Lx9 LINE L1 7356 7637 -7 4 1217 321 26 0 0 chr13 82844767 82844805 -37439507 + (TATTG)n Simple_repeat Simple_repeat 3 40 0 4 1217 622 348 19 15 chr13 82844842 82845113 -37439199 - B4 SINE B4 -18 274 3 4 1217 23 0 0 0 chr13 82845821 82845844 -37438468 + AT_rich Low_complexity Low_complexity 1 23 0 4 1217 21 71 0 0 chr13 82846390 82846432 -37437880 + AT_rich Low_complexity Low_complexity 1 42 0 4 1217 229 281 66 33 chr13 82847810 82847961 -37436351 + MIR SINE MIR 82 237 -25 4 1217 220 273 0 0 chr13 82848252 82848296 -37436016 - ID4_ SINE ID -28 55 12 4 1217 351 0 0 0 chr13 82848307 82848346 -37435966 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1217 225 0 0 0 chr13 82848346 82848370 -37435942 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1217 736 115 0 21 chr13 82848624 82848766 -37435546 + (TCTCTG)n Simple_repeat Simple_repeat 6 144 0 4 1217 207 0 0 0 chr13 82848763 82848786 -37435526 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1217 359 325 52 26 chr13 82848787 82848942 -37435370 - RSINE1 SINE B4 0 165 7 4 1217 2022 289 60 34 chr13 82850176 82851162 -37433150 + Lx9 LINE L1 4888 5932 -1712 4 1217 452 333 6 0 chr13 82851427 82851589 -37432723 + Lx9 LINE L1 6288 6450 -1023 4 1217 934 317 139 70 chr13 82852111 82853076 -37431236 + Lx9 LINE L1 6588 7618 -26 4 1217 225 259 90 83 chr13 82853638 82853794 -37430518 + RLTR21 LTR ERVK 251 407 -1165 4 1217 304 357 31 8 chr13 82854241 82854368 -37429944 - MIRb SINE MIR -46 222 93 4 1217 21 57 0 0 chr13 82854422 82854457 -37429855 + AT_rich Low_complexity Low_complexity 1 35 0 4 1217 24 32 0 0 chr13 82854514 82854545 -37429767 + AT_rich Low_complexity Low_complexity 1 31 0 4 1217 281 305 7 163 chr13 82854646 82854787 -37429525 + ID_B1 SINE B4 4 122 -170 4 1217 296 307 78 8 chr13 82854755 82854883 -37429429 + B1F1 SINE Alu 5 141 -8 4 1217 420 311 50 70 chr13 82854904 82855276 -37429036 + MLT1C LTR MaLR 34 390 0 4 1217 295 349 51 51 chr13 82855322 82855497 -37428815 + MER2 DNA MER2_type 2 176 -169 4 1217 289 364 49 14 chr13 82855712 82855854 -37428458 + MER58A DNA MER1_type 67 213 -11 4 1217 258 273 0 11 chr13 82857285 82857374 -37426938 + L1M4 LINE L1 4982 5069 -1077 4 1217 401 75 19 0 chr13 82857921 82857974 -37426338 - HAL1-3A_ME LINE L1 -829 2029 1976 4 1217 621 0 0 0 chr13 82858844 82858913 -37425399 + (TC)n Simple_repeat Simple_repeat 2 70 0 4 1217 557 28 14 0 chr13 82858939 82859010 -37425302 + (TAGA)n Simple_repeat Simple_repeat 1 72 0 4 1217 903 115 0 0 chr13 82859266 82859405 -37424907 + (TTTC)n Simple_repeat Simple_repeat 2 140 0 4 1217 1147 61 7 0 chr13 82859424 82859571 -37424741 - B1_Mus1 SINE Alu 0 148 1 4 1217 225 0 0 0 chr13 82862898 82862923 -37421389 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1217 323 384 11 58 chr13 82862923 82863097 -37421215 - MLT1C LTR MaLR -8 459 294 4 1217 245 269 60 0 chr13 82863113 82863180 -37421132 + MLT1A1 LTR MaLR 14 84 -290 4 1217 370 285 54 38 chr13 82863199 82863353 -37420959 + MLT1A1 LTR MaLR 207 406 -2 4 1217 624 71 0 29 chr13 82863465 82863567 -37420745 + (TA)n Simple_repeat Simple_repeat 1 99 0 4 1217 1835 155 9 61 chr13 82863656 82864000 -37420312 + ORR1A3 LTR MaLR 1 326 0 4 1217 23 68 0 0 chr13 82864509 82864553 -37419759 + AT_rich Low_complexity Low_complexity 1 44 0 4 1217 212 0 36 0 chr13 82865406 82865434 -37418878 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1217 1019 67 0 29 chr13 82865437 82865576 -37418736 - B1_Mus1 SINE Alu -13 135 1 5 1217 230 276 0 0 chr13 82865776 82865834 -37418478 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1217 733 317 76 25 chr13 82866008 82866322 -37417990 + MLT1A0 LTR MaLR 11 340 -25 5 1217 265 304 76 9 chr13 82866563 82866655 -37417657 + L2a LINE L2 3298 3423 -3 5 1217 300 27 0 0 chr13 82869037 82869074 -37415238 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1217 22 0 0 0 chr13 82869632 82869654 -37414658 + AT_rich Low_complexity Low_complexity 1 22 0 5 1217 201 39 0 0 chr13 82869813 82869839 -37414473 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1217 376 302 146 16 chr13 82869949 82870105 -37414207 + B3 SINE B2 3 182 -34 5 1217 4567 89 13 0 chr13 82870105 82870736 -37413576 + L1_Mus3 LINE L1 5998 6636 -2 5 1217 376 302 146 16 chr13 82870736 82870764 -37413548 + B3 SINE B2 183 210 -6 5 1217 349 177 59 65 chr13 82871383 82871489 -37412823 - PB1D7 SINE Alu 0 120 15 5 1217 407 186 14 0 chr13 82872531 82872601 -37411711 - RSINE1 SINE B4 -92 73 3 5 1217 654 122 0 0 chr13 82872976 82873083 -37411229 + (TC)n Simple_repeat Simple_repeat 1 107 0 5 1217 310 232 35 58 chr13 82873833 82873884 -37410428 - MER58B DNA MER1_type -78 263 214 5 1217 2562 156 34 0 chr13 82873884 82874300 -37410012 + RLTR23 LTR ERV1 1 430 0 5 1217 310 232 35 58 chr13 82874300 82874335 -37409977 - MER58B DNA MER1_type -128 213 179 5 1217 3502 85 33 14 chr13 82874457 82874968 -37409344 + L1_Mus3 LINE L1 6113 6633 -5 5 1217 2022 201 18 3 chr13 82875264 82875649 -37408663 + ORR1B1 LTR MaLR 4 394 0 5 1217 2474 256 47 26 chr13 82875713 82876553 -37407759 + Lx7 LINE L1 6784 7696 0 5 1217 1110 84 0 0 chr13 82877058 82877200 -37407112 + B1_Mus2 SINE Alu 1 142 -5 5 1217 239 56 74 0 chr13 82877331 82877385 -37406927 + (TTTTG)n Simple_repeat Simple_repeat 3 60 0 5 1217 189 213 0 0 chr13 82878060 82878107 -37406205 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1217 249 57 0 0 chr13 82878330 82878365 -37405947 + (CTAAA)n Simple_repeat Simple_repeat 5 39 0 5 1217 4067 58 4 11 chr13 82878469 82879014 -37405298 + L1Md_F3 LINE L1 6048 6584 0 5 1217 4067 58 4 11 chr13 82879014 82879030 -37405282 + L1Md_F3 LINE L1 6560 6570 -14 5 1217 985 75 82 0 chr13 82879040 82879174 -37405138 + B1_Mm SINE Alu 2 146 -1 5 1217 873 178 40 0 chr13 82879192 82879366 -37404946 + Lx LINE L1 6473 6653 -1 5 1217 25 0 0 0 chr13 82879636 82879661 -37404651 + AT_rich Low_complexity Low_complexity 1 25 0 5 1217 289 382 21 82 chr13 82879790 82879984 -37404328 - B3A SINE B2 -16 182 1 5 1217 229 278 31 0 chr13 82880387 82880484 -37403828 - L1M5 LINE L1 -1553 4593 4494 5 1217 901 320 132 50 chr13 82880953 82881299 -37403013 + MER82 DNA MER2_type 26 430 -223 5 1217 378 284 52 0 chr13 82881299 82881433 -37402879 + B1_Mur1 SINE Alu 1 141 -8 5 1217 901 320 132 50 chr13 82881433 82881547 -37402765 + MER82 DNA MER2_type 431 524 -129 5 1217 384 22 0 0 chr13 82881665 82881710 -37402602 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1217 25 0 0 0 chr13 82882918 82882943 -37401369 + AT_rich Low_complexity Low_complexity 1 25 0 5 1217 618 91 0 0 chr13 82884057 82884156 -37400156 + (TC)n Simple_repeat Simple_repeat 1 99 0 5 1217 330 26 0 0 chr13 82884160 82884199 -37400113 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1217 914 109 24 12 chr13 82885400 82885567 -37398745 - L1_Mus3 LINE L1 0 6638 6470 5 1217 396 0 0 0 chr13 82885629 82885673 -37398639 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1217 3163 55 8 0 chr13 82887268 82887665 -37396647 + MTB LTR MaLR 1 400 0 5 1217 506 330 139 0 chr13 82889057 82889287 -37395025 - MLT1B LTR MaLR -17 373 112 5 1217 235 392 74 25 chr13 82889421 82889664 -37394648 + MLT1A0 LTR MaLR 28 282 -83 5 1217 27 29 0 0 chr13 82889753 82889787 -37394525 + AT_rich Low_complexity Low_complexity 1 34 0 5 1217 260 252 97 18 chr13 82889983 82890096 -37394216 + MTD LTR MaLR 3 124 -297 5 1217 28003 119 28 3 chr13 82890108 82891423 -37392889 - L1_Mus3 LINE L1 -3 6635 5292 5 1217 783 32 0 0 chr13 82891423 82891517 -37392795 + (TA)n Simple_repeat Simple_repeat 1 94 0 5 1217 28003 132 27 9 chr13 82891517 82896068 -37388244 - L1_Mus3 LINE L1 -592 5291 675 5 1217 1192 122 26 21 chr13 82896130 82896323 -37387989 - B2_Mm2 SINE B2 0 195 2 5 1217 570 322 16 16 chr13 82896325 82896508 -37387804 + MTD LTR MaLR 108 290 -129 5 1217 198 0 0 0 chr13 82896514 82896536 -37387776 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 1217 564 160 0 0 chr13 82896609 82896709 -37387603 + CT-rich Low_complexity Low_complexity 3 102 0 5 1217 277 289 123 0 chr13 82896741 82896855 -37387457 + MTD LTR MaLR 268 395 -24 5 1217 560 53 13 0 chr13 82896907 82896983 -37387329 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 5 1217 2002 125 49 44 chr13 82897176 82897543 -37386769 + Lx3_Mus LINE L1 5967 6335 -674 5 1217 1364 271 40 91 chr13 82897671 82898252 -37386060 + RLTR20A1 LTR ERVK 1 551 0 5 1217 2018 146 21 15 chr13 82898287 82898621 -37385691 + ORR1A1 LTR MaLR 3 338 -8 5 1217 4868 174 16 7 chr13 82899225 82899981 -37384331 + Lx4B LINE L1 6164 6930 -128 5 1217 252 0 0 0 chr13 82899981 82900009 -37384303 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1217 4868 174 16 7 chr13 82900009 82900139 -37384173 + Lx4B LINE L1 6931 7057 -1 5 1217 25 51 0 0 chr13 82900274 82900313 -37383999 + AT_rich Low_complexity Low_complexity 1 39 0 5 1217 294 29 0 0 chr13 82900463 82900498 -37383814 + (TTA)n Simple_repeat Simple_repeat 3 37 0 5 1217 946 295 54 76 chr13 82900503 82901054 -37383258 - Lx9 LINE L1 -171 7473 6935 5 1217 214 245 0 19 chr13 82901058 82901112 -37383200 + G-rich Low_complexity Low_complexity 3 55 0 5 1217 183 140 60 0 chr13 82901256 82901306 -37383006 + (TA)n Simple_repeat Simple_repeat 2 54 0 5 1217 3406 142 66 0 chr13 82901414 82901972 -37382340 - MT2B LTR ERVL -6 595 1 5 1217 331 135 39 51 chr13 82902010 82902088 -37382224 - ORR1A3-int LTR MaLR -1323 640 564 5 1217 271 127 169 0 chr13 82902088 82902159 -37382153 - MERVL_2A-int LTR ERVL -139 5622 5540 5 1217 541 193 0 27 chr13 82902176 82902288 -37382024 - MERVL_2A-int LTR ERVL -278 5483 5375 5 1217 1559 170 41 22 chr13 82902297 82902615 -37381697 - ORR1A3 LTR MaLR -2 324 1 5 1217 257 51 26 0 chr13 82902731 82902770 -37381542 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 5 1217 316 393 59 48 chr13 82903631 82903920 -37380392 + MLT1A LTR MaLR 80 371 -3 5 1217 322 263 53 0 chr13 82904424 82904500 -37379812 - ID_B1 SINE B4 -55 169 90 5 1217 21 57 0 0 chr13 82904572 82904607 -37379705 + AT_rich Low_complexity Low_complexity 1 35 0 5 1217 7276 72 18 7 chr13 82904747 82905810 -37378502 - L1_Mus2 LINE L1 0 6566 5493 5 1217 29 28 0 0 chr13 82905859 82905895 -37378417 + AT_rich Low_complexity Low_complexity 1 36 0 5 1217 574 302 24 42 chr13 82906338 82906504 -37377808 + RSINE1 SINE B4 3 165 0 5 1217 464 139 36 36 chr13 82906769 82906881 -37377431 + L1Md_F2 LINE L1 6468 6579 -3 5 1217 21 0 0 75 chr13 82908351 82908391 -37375921 + AT_rich Low_complexity Low_complexity 1 37 0 5 1217 24 32 0 0 chr13 82908541 82908572 -37375740 + AT_rich Low_complexity Low_complexity 1 31 0 5 1217 541 241 0 0 chr13 82908825 82908933 -37375379 - ID_B1 SINE B4 -20 204 97 5 1217 1514 260 70 28 chr13 82909051 82909521 -37374791 + RMER15 LTR ERVL 29 518 -57 5 1217 358 316 21 0 chr13 82909531 82909626 -37374686 - ID_B1 SINE B4 -123 101 5 5 1217 6666 143 16 2 chr13 82909708 82910927 -37373385 + Lx LINE L1 5418 6652 -2 5 1217 872 344 15 18 chr13 82911062 82911336 -37372976 + ORR1E LTR MaLR 28 303 -56 5 1217 2837 84 16 44 chr13 82911336 82911769 -37372543 + BGLII LTR ERVK 1 421 0 5 1217 872 344 15 18 chr13 82911769 82911820 -37372492 + ORR1E LTR MaLR 304 352 -7 5 1217 200 200 0 0 chr13 82912013 82912053 -37372259 + A-rich Low_complexity Low_complexity 3 42 0 5 1217 221 324 95 0 chr13 82912529 82912634 -37371678 - MIR SINE MIR -69 193 79 5 1217 350 363 0 0 chr13 82912793 82912906 -37371406 + ID_B1 SINE B4 112 224 0 5 1217 279 0 0 0 chr13 82912910 82912941 -37371371 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1217 5322 114 14 20 chr13 82913552 82914366 -37369946 - Lx3_Mus LINE L1 -1 7008 6200 5 1217 806 122 7 20 chr13 82914374 82914524 -37369788 + Lx3_Mus LINE L1 6041 6188 -821 5 1217 2074 109 31 62 chr13 82914543 82914896 -37369416 - L1_Mus2 LINE L1 0 6566 6225 5 1217 1218 88 35 6 chr13 82914896 82915060 -37369252 + L1_Mus2 LINE L1 5992 6161 -405 5 1217 354 240 6 19 chr13 82915768 82915925 -37368387 + (TATG)n Simple_repeat Simple_repeat 4 158 0 5 1217 21 0 0 0 chr13 82916211 82916232 -37368080 + AT_rich Low_complexity Low_complexity 1 21 0 5 1217 462 239 175 2 chr13 82916253 82916408 -37367904 - ORR1D1 LTR MaLR 0 374 195 5 1217 4432 51 4 0 chr13 82916408 82917096 -37367216 + L1Md_F3 LINE L1 5328 6018 -566 5 1217 759 252 35 15 chr13 82917097 82917294 -37367018 - ORR1D1 LTR MaLR -173 201 1 5 1217 22 70 0 0 chr13 82917534 82917577 -37366735 + AT_rich Low_complexity Low_complexity 1 43 0 5 1217 33 0 0 0 chr13 82917661 82917694 -37366618 + AT_rich Low_complexity Low_complexity 1 33 0 5 1217 208 222 0 22 chr13 82918260 82918306 -37366006 + C-rich Low_complexity Low_complexity 2 46 0 5 1217 536 0 16 0 chr13 82919003 82919067 -37365245 + (TA)n Simple_repeat Simple_repeat 1 65 0 5 1217 252 0 0 0 chr13 82919497 82919525 -37364787 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1217 209 214 0 18 chr13 82920297 82920354 -37363958 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1217 186 43 0 0 chr13 82921143 82921166 -37363146 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1217 22 0 0 0 chr13 82922344 82922366 -37361946 + AT_rich Low_complexity Low_complexity 1 22 0 5 1217 268 321 114 18 chr13 82924475 82924589 -37359723 - PB1 SINE Alu -2 125 1 5 1217 348 24 0 0 chr13 82926249 82926290 -37358022 + (TGAA)n Simple_repeat Simple_repeat 3 43 0 5 1217 248 271 17 0 chr13 82927755 82927814 -37356498 + ID4_ SINE ID 5 64 -19 5 1217 24 53 0 0 chr13 82927844 82927882 -37356430 + AT_rich Low_complexity Low_complexity 1 38 0 5 1217 507 234 34 27 chr13 82928707 82928856 -37355456 + B1_Mur4 SINE Alu 1 150 0 5 1217 640 139 28 0 chr13 82928885 82928993 -37355319 - L1_Mus4 LINE L1 -736 5900 5790 5 1217 1880 164 9 0 chr13 82928993 82929311 -37355001 - L1_Mus4 LINE L1 -206 5677 5357 5 1217 33505 99 13 22 chr13 82929338 82935692 -37348620 - L1Md_F2 LINE L1 -10 6572 238 5 1217 4628 167 34 11 chr13 82935700 82936576 -37347736 - L1_Mur2 LINE L1 -515 5362 4467 6 1217 1196 169 16 12 chr13 82936584 82936829 -37347483 + Lx2 LINE L1 5955 6200 -797 6 1217 2647 190 87 96 chr13 82937471 82938193 -37346119 + RMER6D LTR ERVK 1 716 -4 6 1217 294 29 0 0 chr13 82938791 82938826 -37345486 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 1217 504 105 0 0 chr13 82938826 82938901 -37345411 + (TATG)n Simple_repeat Simple_repeat 3 78 0 6 1217 213 178 0 0 chr13 82939753 82939798 -37344514 + CT-rich Low_complexity Low_complexity 2 46 0 6 1217 24 0 0 0 chr13 82941015 82941039 -37343273 + AT_rich Low_complexity Low_complexity 1 24 0 6 1217 994 251 92 36 chr13 82941496 82941856 -37342456 + ORR1C2 LTR MaLR 1 380 -4 6 1217 211 228 0 17 chr13 82941895 82941953 -37342359 + T-rich Low_complexity Low_complexity 3 59 0 6 1217 2143 127 3 24 chr13 82941959 82942291 -37342021 + ORR1A2 LTR MaLR 1 325 -2 6 1217 2679 141 15 22 chr13 82942293 82942756 -37341556 + ORR1A2-int LTR MaLR 1 460 -1503 6 1217 6434 140 6 3 chr13 82942736 82943744 -37340568 + ORR1A2-int LTR MaLR 941 1951 -12 6 1217 445 344 0 0 chr13 82943887 82944009 -37340303 - ID_B1 SINE B4 -18 206 85 6 1217 328 355 34 37 chr13 82944367 82944636 -37339676 - L1M4 LINE L1 -421 5758 5491 6 1217 334 361 28 11 chr13 82944691 82944873 -37339439 - MLT1E LTR MaLR -9 644 460 6 1217 4438 67 14 0 chr13 82945063 82945642 -37338670 + L1Md_F2 LINE L1 5996 6582 0 6 1217 264 365 83 9 chr13 82945974 82946397 -37337915 - L1M4 LINE L1 -990 5156 4703 6 1217 22 0 0 0 chr13 82946419 82946441 -37337871 + AT_rich Low_complexity Low_complexity 1 22 0 6 1217 2087 179 90 24 chr13 82946514 82947093 -37337219 + L1_Mur2 LINE L1 2874 3490 -2390 6 1217 3876 190 50 15 chr13 82947194 82948086 -37336226 + L1_Mur2 LINE L1 4378 5301 -576 6 1217 27 0 0 0 chr13 82948353 82948380 -37335932 + AT_rich Low_complexity Low_complexity 1 27 0 6 1217 6227 167 32 51 chr13 82948543 82948729 -37335583 - ORR1A4-int LTR MaLR 0 1963 1790 6 1217 224 22 65 22 chr13 82948729 82948775 -37335537 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 1217 6227 187 42 57 chr13 82948775 82950389 -37333923 - ORR1A4-int LTR MaLR -174 1789 1 6 1217 1563 192 14 67 chr13 82950390 82950736 -37333576 - ORR1A4 LTR MaLR -1 328 1 6 1217 1632 184 45 18 chr13 82950768 82951105 -37333207 + ORR1B1 LTR MaLR 41 386 -8 6 1217 348 294 67 0 chr13 82951533 82951654 -37332658 + B1F SINE Alu 5 132 -17 6 1217 388 328 162 8 chr13 82952898 82953132 -37331180 - Lx8 LINE L1 -424 7049 6780 6 1217 1194 219 48 12 chr13 82953182 82953641 -37330671 + RMER15 LTR ERVL 1 575 0 6 1217 744 275 17 0 chr13 82953840 82954018 -37330294 + MTD LTR MaLR 224 404 -15 6 1217 183 80 0 0 chr13 82954213 82954238 -37330074 + (TC)n Simple_repeat Simple_repeat 1 25 0 6 1217 473 383 16 113 chr13 82955046 82955355 -37328957 + B4A SINE B4 14 292 0 6 1217 4197 22 12 2 chr13 82956295 82956783 -37327529 + MT2_Mm LTR ERVL 1 493 0 6 1217 372 71 0 0 chr13 82957048 82957104 -37327208 + (A)n Simple_repeat Simple_repeat 1 56 0 6 1217 689 293 112 18 chr13 82957323 82957601 -37326711 + MTD LTR MaLR 102 405 -14 6 1217 366 42 0 0 chr13 82957715 82957763 -37326549 + (TTTTG)n Simple_repeat Simple_repeat 1 48 0 6 1217 438 20 0 0 chr13 82958129 82958180 -37326132 + (GGA)n Simple_repeat Simple_repeat 2 52 0 6 1217 785 314 108 43 chr13 82958205 82959163 -37325149 - L1MA4A LINE L1 -406 5897 4825 6 1217 35309 47 0 4 chr13 82959378 82964797 -37319515 + L1Md_T LINE L1 94 5589 -297 6 1217 8477 32 0 0 chr13 82964797 82965793 -37318519 + L1Md_T LINE L1 5590 6585 0 6 1217 1639 249 274 11 chr13 82966116 82966562 -37317750 + RLTR20B1 LTR ERVK 1 563 0 6 1217 686 289 11 5 chr13 82966800 82966988 -37317324 + Lx7 LINE L1 6627 6815 -881 6 1217 1087 267 92 24 chr13 82966986 82967528 -37316784 + L1_Mur3 LINE L1 310 1186 -6526 6 1217 883 312 69 39 chr13 82967516 82968036 -37316276 + Lx7 LINE L1 6801 7336 -360 6 1217 510 17 0 0 chr13 82968084 82968143 -37316169 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 152 446 267 85 28 chr13 82968248 82968578 -37315734 + L1M3 LINE L1 3708 4064 -1816 6 1218 225 0 0 0 chr13 82968660 82968685 -37315627 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1218 3721 141 105 59 chr13 82968685 82970132 -37314180 - RMER17D LTR ERVK -10 879 1 6 1218 812 270 63 19 chr13 82970933 82971201 -37313111 - Lx7 LINE L1 -247 7449 7170 6 1218 318 26 0 0 chr13 82971230 82971269 -37313043 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1218 4227 22 0 0 chr13 82971341 82971829 -37312483 - L1Md_F3 LINE L1 -239 6345 5858 6 1218 2171 37 0 7 chr13 82971829 82972100 -37312212 + L1Md_F3 LINE L1 6316 6584 0 6 1218 186 103 0 0 chr13 82972196 82972225 -37312087 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 6 1218 22 0 0 0 chr13 82972334 82972356 -37311956 + AT_rich Low_complexity Low_complexity 1 22 0 6 1218 6241 150 54 6 chr13 82973368 82974455 -37309857 + Lx2B LINE L1 5855 6994 -6 6 1218 257 368 35 0 chr13 82974892 82974979 -37309333 + B4 SINE B4 2 91 -201 6 1218 604 267 66 5 chr13 82974991 82975187 -37309125 - Lx6 LINE L1 -1290 6170 5963 6 1218 830 301 20 6 chr13 82975220 82975521 -37308791 + Lx6 LINE L1 6945 7132 -328 6 1218 6640 168 43 72 chr13 82975519 82977717 -37306595 + Lx4B LINE L1 4803 7005 -53 6 1218 1578 11 0 0 chr13 82977747 82977927 -37306385 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 6 1218 1713 316 44 21 chr13 82979605 82980406 -37303906 - Lx9 LINE L1 -469 7175 6227 6 1218 188 323 129 15 chr13 82980835 82980967 -37303345 + MIRc SINE MIR 108 254 -14 6 1218 609 331 41 7 chr13 82981011 82981303 -37303009 + Lx8 LINE L1 6224 6525 -948 6 1218 579 350 102 29 chr13 82981584 82982240 -37302072 + Lx9 LINE L1 6682 7385 -259 6 1218 334 236 45 0 chr13 82983995 82984105 -37300207 - Lx9 LINE L1 -1 7643 7529 6 1218 1206 115 22 0 chr13 82984245 82984428 -37299884 - B2_Mm2 SINE B2 -2 193 7 6 1218 549 129 0 0 chr13 82985631 82985724 -37298588 + (CA)n Simple_repeat Simple_repeat 2 94 0 6 1218 1182 73 28 0 chr13 82985786 82985963 -37298349 - L1_Mus3 LINE L1 0 6638 6457 6 1218 22 0 0 0 chr13 82986093 82986115 -37298197 + AT_rich Low_complexity Low_complexity 1 22 0 6 1218 423 0 0 0 chr13 82988751 82988798 -37295514 + (TA)n Simple_repeat Simple_repeat 1 47 0 6 1218 376 267 141 62 chr13 82989100 82989292 -37295020 - B3 SINE B2 -8 208 2 6 1218 22 0 0 0 chr13 82989729 82989751 -37294561 + AT_rich Low_complexity Low_complexity 1 22 0 6 1218 5976 123 35 1 chr13 82990000 82990937 -37293375 - Lx2 LINE L1 -1 6996 6028 6 1218 363 347 40 7 chr13 82991345 82991493 -37292819 - MERVL_2A-int LTR ERVL -1392 4369 4217 6 1218 504 0 0 0 chr13 82991752 82991808 -37292504 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1218 408 20 0 0 chr13 82991987 82992036 -37292276 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1218 724 342 58 11 chr13 82992106 82992366 -37291946 - B4 SINE B4 -20 272 1 6 1218 296 302 24 79 chr13 82992683 82992809 -37291503 - B1F1 SINE Alu -1 119 1 6 1218 438 20 0 0 chr13 82993154 82993205 -37291107 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1218 564 15 0 0 chr13 82993206 82993271 -37291041 + (GA)n Simple_repeat Simple_repeat 2 66 0 6 1218 22 0 0 0 chr13 82994057 82994079 -37290233 + AT_rich Low_complexity Low_complexity 1 22 0 6 1218 260 27 0 26 chr13 82994198 82994236 -37290076 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 6 1218 6355 72 16 16 chr13 82994648 82995513 -37288799 + L1_Mus3 LINE L1 5588 6452 -186 6 1218 851 96 29 4 chr13 82997761 82998013 -37286299 + (TAGA)n Simple_repeat Simple_repeat 1 258 0 6 1218 7014 127 14 4 chr13 82998451 82999998 -37284314 - L1_Mus4 LINE L1 -33 6603 5040 6 1218 8168 149 17 11 chr13 83000000 83000303 -37284009 - L1_Mm LINE L1 -846 5037 4737 1 1218 198 0 0 0 chr13 83000303 83000325 -37283987 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2 1218 8168 149 17 11 chr13 83000325 83001456 -37282856 - L1_Mm LINE L1 -1147 4736 3594 1 1218 470 296 76 33 chr13 83001526 83001736 -37282576 + MamGypLTR3 LTR Gypsy 606 824 -15 3 1218 1221 105 33 0 chr13 83002511 83002692 -37281620 - B2_Mm1t SINE B2 -6 187 1 4 1218 361 291 88 41 chr13 83003226 83003373 -37280939 + B2_Mm2 SINE B2 9 162 -33 5 1218 576 0 0 0 chr13 83003376 83003440 -37280872 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 1218 900 51 0 0 chr13 83003440 83003557 -37280755 + (CA)n Simple_repeat Simple_repeat 1 118 0 7 1218 180 77 0 0 chr13 83003567 83003593 -37280719 + (CAGAGA)n Simple_repeat Simple_repeat 5 30 0 8 1218 270 212 121 0 chr13 83003626 83003725 -37280587 - Lx9 LINE L1 -3 7641 7531 9 1218 272 325 31 15 chr13 83003804 83003988 -37280324 + Lx9 LINE L1 6802 7033 -611 1 1218 1465 180 153 12 chr13 83004305 83004625 -37279687 + ORR1B2 LTR MaLR 1 365 -2 1 1218 436 314 102 48 chr13 83005183 83005350 -37278962 - B4 SINE B4 -59 233 58 1 1218 1137 49 7 0 chr13 83006342 83006485 -37277827 + B1_Mm SINE Alu 1 144 -3 1 1218 279 0 64 21 chr13 83006485 83006532 -37277780 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1 1218 1287 70 0 0 chr13 83006867 83007039 -37277273 - L1_Mus1 LINE L1 0 6567 6396 1 1218 368 243 13 93 chr13 83007875 83008025 -37276287 - Lx7 LINE L1 0 7696 7559 1 1218 732 23 0 0 chr13 83008216 83008302 -37276010 + (GA)n Simple_repeat Simple_repeat 1 86 0 1 1218 206 376 15 88 chr13 83008921 83009058 -37275254 - MIRm SINE MIR -147 129 3 1 1218 321 26 0 0 chr13 83009654 83009692 -37274620 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1218 275 258 103 41 chr13 83010144 83010241 -37274071 + PB1D10 SINE Alu 14 116 -1 2 1218 264 271 258 6 chr13 83011253 83011431 -37272881 - Tigger7 DNA MER2_type -11 2480 2258 2 1218 731 323 108 7 chr13 83011479 83011685 -37272627 - Tigger7 DNA MER2_type -2037 454 234 2 1218 252 0 0 0 chr13 83011685 83011713 -37272599 + (CAA)n Simple_repeat Simple_repeat 3 30 0 2 1218 731 323 108 7 chr13 83011713 83011802 -37272510 - Tigger7 DNA MER2_type -2258 233 129 2 1218 397 286 49 14 chr13 83012123 83012265 -37272047 - B1F1 SINE Alu -2 147 1 2 1218 217 222 0 36 chr13 83012451 83012507 -37271805 + (CATA)n Simple_repeat Simple_repeat 3 56 0 2 1218 250 363 99 45 chr13 83012576 83012778 -37271534 - MIRb SINE MIR -52 216 4 2 1218 576 238 16 0 chr13 83013749 83013875 -37270437 + Lx4B LINE L1 6885 7012 -46 2 1218 198 0 0 0 chr13 83013888 83013910 -37270402 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 2 1218 5289 71 11 8 chr13 83014171 83014879 -37269433 - L1_Mus1 LINE L1 0 6567 5858 2 1218 222 322 33 42 chr13 83014899 83015019 -37269293 + MIR SINE MIR 24 142 -120 2 1218 198 374 71 0 chr13 83015096 83015195 -37269117 - L2a LINE L2 0 3426 3321 3 1218 543 90 0 0 chr13 83015485 83015563 -37268749 + (TA)n Simple_repeat Simple_repeat 2 79 0 3 1218 1681 223 16 77 chr13 83016121 83016630 -37267682 - L1_Mur3 LINE L1 -185 5695 5218 3 1218 2881 119 17 17 chr13 83016644 83017115 -37267197 - RLTR31B_Mm LTR ERVK -86 471 1 3 1218 4206 255 36 26 chr13 83017134 83017232 -37267080 + Lx7 LINE L1 5811 5911 -1785 3 1218 2990 226 71 34 chr13 83017232 83018104 -37266208 + RMER13B LTR ERVK 1 904 -4 3 1218 4206 255 36 26 chr13 83018104 83019175 -37265137 + Lx7 LINE L1 5912 6992 -704 3 1218 643 264 123 48 chr13 83019180 83019618 -37264694 + Lx7 LINE L1 7222 7692 -4 3 1218 216 200 0 0 chr13 83019631 83019676 -37264636 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1218 731 328 122 18 chr13 83020180 83020303 -37264009 + ORR1D1 LTR MaLR 1 140 -234 3 1218 1031 108 0 0 chr13 83020303 83020442 -37263870 + B1_Mm SINE Alu 3 141 -6 3 1218 261 0 0 0 chr13 83020445 83020474 -37263838 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1218 731 328 122 18 chr13 83020474 83020508 -37263804 + ORR1D1 LTR MaLR 141 179 -195 3 1218 3448 55 7 7 chr13 83020508 83020949 -37263363 - L1_Mus1 LINE L1 0 6567 6127 4 1218 731 328 122 18 chr13 83020949 83021115 -37263197 + ORR1D1 LTR MaLR 180 359 -15 3 1218 5100 238 59 8 chr13 83021118 83022422 -37261890 + ORR1D1-int LTR MaLR 1 1370 0 3 1218 876 257 125 76 chr13 83022424 83022789 -37261523 + ORR1D1 LTR MaLR 3 375 -3 3 1218 196 329 0 12 chr13 83022792 83022872 -37261440 + MIR SINE MIR 109 187 -75 4 1218 26 0 0 0 chr13 83023282 83023308 -37261004 + AT_rich Low_complexity Low_complexity 1 26 0 4 1218 357 256 13 0 chr13 83023854 83023932 -37260380 - ID4 SINE ID 0 83 5 4 1218 206 167 0 16 chr13 83024437 83024498 -37259814 + A-rich Low_complexity Low_complexity 3 62 0 4 1218 1062 205 162 12 chr13 83024636 83024752 -37259560 - Lx9 LINE L1 -4 7640 7488 4 1218 267 31 0 0 chr13 83024752 83024784 -37259528 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1218 1062 205 162 12 chr13 83024784 83025012 -37259300 - Lx9 LINE L1 -157 7487 7244 4 1218 222 169 0 58 chr13 83026290 83026359 -37257953 + T-rich Low_complexity Low_complexity 3 67 0 4 1218 882 312 24 14 chr13 83026461 83026717 -37257595 - MTE2b LTR MaLR -28 351 92 4 1218 461 28 56 0 chr13 83026717 83026788 -37257524 + L1Md_F3 LINE L1 6510 6584 0 4 1218 882 312 24 14 chr13 83026788 83026823 -37257489 - MTE2b LTR MaLR -288 91 57 4 1218 369 301 0 0 chr13 83026820 83026903 -37257409 - MTE2b LTR MaLR -279 100 18 4 1218 23 33 0 0 chr13 83027253 83027283 -37257029 + AT_rich Low_complexity Low_complexity 1 30 0 5 1218 366 389 38 0 chr13 83027873 83028004 -37256308 - LTR16A LTR ERVL -292 159 24 5 1218 235 335 62 25 chr13 83028569 83028811 -37255501 - Lx9 LINE L1 -120 7524 7274 5 1218 625 254 91 24 chr13 83028831 83029041 -37255271 + Lx9 LINE L1 6775 6998 -646 5 1218 284 247 105 21 chr13 83029232 83029327 -37254985 - MTEa LTR MaLR -2 377 275 5 1218 236 336 100 0 chr13 83029412 83029522 -37254790 - MTEa LTR MaLR -188 196 76 5 1218 1094 82 0 13 chr13 83029689 83029838 -37254474 + B1_Mus2 SINE Alu 1 147 0 5 1218 1074 319 75 10 chr13 83030125 83030536 -37253776 - Lx8 LINE L1 -186 7287 6850 5 1218 22 94 0 0 chr13 83031230 83031294 -37253018 + AT_rich Low_complexity Low_complexity 1 64 0 5 1218 839 245 101 76 chr13 83033765 83033843 -37250469 - RLTR20B3 LTR ERVK 0 528 448 5 1218 369 109 0 0 chr13 83033843 83033898 -37250414 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1218 839 226 93 40 chr13 83033898 83034084 -37250228 - RLTR20B3 LTR ERVK -106 471 282 5 1218 559 290 117 53 chr13 83034320 83034662 -37249650 - MLT1A0 LTR MaLR -1 364 1 6 1218 1423 75 0 0 chr13 83034674 83034860 -37249452 + L1_Mus2 LINE L1 6381 6566 0 6 1218 318 260 26 10 chr13 83034979 83035071 -37249241 + RLTR20A1 LTR ERVK 214 302 -276 6 1218 328 20 20 20 chr13 83035768 83035818 -37248494 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 6 1218 3522 159 17 10 chr13 83035821 83036419 -37247893 - Lx2B LINE L1 -27 6973 6372 6 1218 1362 184 85 21 chr13 83036439 83036767 -37247545 - Lx LINE L1 -1 6653 6305 6 1218 4770 184 11 23 chr13 83036998 83037894 -37246418 + Lx2 LINE L1 6107 6991 -6 6 1218 24 0 0 0 chr13 83038029 83038053 -37246259 + AT_rich Low_complexity Low_complexity 1 24 0 6 1218 27 29 0 0 chr13 83038452 83038486 -37245826 + AT_rich Low_complexity Low_complexity 1 34 0 6 1218 297 89 0 0 chr13 83040419 83040464 -37243848 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1218 212 255 0 0 chr13 83043869 83043920 -37240392 + CT-rich Low_complexity Low_complexity 3 53 0 7 1218 21 0 0 0 chr13 83047411 83047432 -37236880 + AT_rich Low_complexity Low_complexity 1 21 0 7 1218 24 0 0 0 chr13 83048588 83048612 -37235700 + AT_rich Low_complexity Low_complexity 1 24 0 7 1218 280 252 98 57 chr13 83049164 83049286 -37235026 + MIRb SINE MIR 97 223 -45 7 1218 1220 80 0 0 chr13 83050768 83050931 -37233381 - Lx3_Mus LINE L1 -1233 5776 5614 7 1218 195 100 0 0 chr13 83051166 83051196 -37233116 + (TTG)n Simple_repeat Simple_repeat 2 31 0 7 1218 711 0 0 0 chr13 83051802 83051881 -37232431 + (GAAA)n Simple_repeat Simple_repeat 2 80 0 7 1218 436 186 18 0 chr13 83052962 83053075 -37231237 + (CA)n Simple_repeat Simple_repeat 1 115 0 7 1218 340 68 0 0 chr13 83053078 83053122 -37231190 + HAL1-3A_ME LINE L1 1976 2019 -839 7 1218 1456 68 5 0 chr13 83055655 83055847 -37228465 + B2_Mm1t SINE B2 1 193 0 7 1218 315 0 0 0 chr13 83055847 83055882 -37228430 + (A)n Simple_repeat Simple_repeat 1 35 0 8 1218 254 299 10 94 chr13 83055885 83055981 -37228331 + B3A SINE B2 111 198 0 8 1218 994 42 0 0 chr13 83056018 83056137 -37228175 - L1Md_F2 LINE L1 -437 6145 6027 8 1218 531 291 253 12 chr13 83057004 83057342 -37226970 + MTD LTR MaLR 1 419 0 8 1218 381 286 82 8 chr13 83060429 83060563 -37223749 + B1_Mur2 SINE Alu 1 144 -5 8 1218 193 109 43 0 chr13 83060564 83060610 -37223702 + GA-rich Low_complexity Low_complexity 1 48 0 8 1218 780 11 0 0 chr13 83060613 83060702 -37223610 + (GGGAA)n Simple_repeat Simple_repeat 2 90 0 8 1218 347 298 67 26 chr13 83061029 83061222 -37223090 - L1MD3 LINE L1 -333 7662 7462 8 1218 536 316 107 23 chr13 83061515 83061823 -37222489 + MLT1C LTR MaLR 8 341 -126 8 1218 452 209 0 18 chr13 83061868 83061980 -37222332 + CT-rich Low_complexity Low_complexity 3 112 0 8 1218 21 71 0 0 chr13 83062714 83062756 -37221556 + AT_rich Low_complexity Low_complexity 1 42 0 9 1218 2309 271 22 95 chr13 83063607 83064617 -37219695 + RMER17B LTR ERVK 2 937 -21 9 1218 255 318 15 0 chr13 83064684 83064750 -37219562 - Lx8 LINE L1 -213 7260 7194 9 1218 1109 68 0 27 chr13 83064957 83065107 -37219205 - B1_Mus1 SINE Alu -1 147 2 9 1218 193 98 49 0 chr13 83065189 83065230 -37219082 + (CA)n Simple_repeat Simple_repeat 1 43 0 9 1218 679 345 59 33 chr13 83065284 83065735 -37218577 - Lx8 LINE L1 -799 6897 6436 9 1218 22 35 0 0 chr13 83066571 83066600 -37217712 + AT_rich Low_complexity Low_complexity 1 29 0 9 1218 452 312 130 0 chr13 83069475 83069613 -37214699 - B3 SINE B2 -48 168 13 9 1218 3287 253 127 38 chr13 83069614 83070980 -37213332 + Lx6 LINE L1 5795 7282 -178 9 1218 1130 82 0 0 chr13 83070980 83071127 -37213185 - B1_Mm SINE Alu 0 147 1 9 1218 1999 274 62 68 chr13 83071127 83071273 -37213039 + Lx6 LINE L1 7283 7427 -33 9 1218 540 30 0 0 chr13 83071912 83071978 -37212334 + (TAG)n Simple_repeat Simple_repeat 1 66 0 9 1218 234 235 55 102 chr13 83072743 83072871 -37211441 + L1MC5 LINE L1 7208 7329 -632 1 1218 459 0 0 0 chr13 83075058 83075109 -37209203 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1218 293 272 18 55 chr13 83075375 83075484 -37208828 + ID_B1 SINE B4 68 172 -52 1 1218 297 297 8 67 chr13 83075392 83075511 -37208801 + PB1D10 SINE Alu 5 116 -1 1 1218 27 0 0 0 chr13 83075800 83075827 -37208485 + AT_rich Low_complexity Low_complexity 1 27 0 1 1218 543 209 54 7 chr13 83078101 83078250 -37206062 - L1MC3 LINE L1 -102 7683 7528 1 1218 23 0 0 0 chr13 83078279 83078302 -37206010 + AT_rich Low_complexity Low_complexity 1 23 0 1 1218 279 0 0 0 chr13 83081187 83081218 -37203094 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1218 239 68 0 64 chr13 83081432 83081479 -37202833 + (TA)n Simple_repeat Simple_repeat 2 45 0 1 1218 21 36 0 0 chr13 83081548 83081576 -37202736 + AT_rich Low_complexity Low_complexity 1 28 0 1 1218 566 282 39 29 chr13 83082490 83082698 -37201614 + Lx6 LINE L1 7240 7449 -11 1 1218 23 78 0 0 chr13 83084512 83084563 -37199749 + AT_rich Low_complexity Low_complexity 1 51 0 1 1218 319 287 88 28 chr13 83084607 83084858 -37199454 + L1M5 LINE L1 5395 5660 -464 1 1218 244 270 0 0 chr13 83085017 83085091 -37199221 + GA-rich Low_complexity Low_complexity 1 74 0 1 1218 26 0 0 0 chr13 83085920 83085946 -37198366 + AT_rich Low_complexity Low_complexity 1 26 0 1 1218 249 259 0 40 chr13 83086075 83086224 -37198088 + GA-rich Low_complexity Low_complexity 3 145 0 1 1218 2043 238 87 30 chr13 83086662 83087320 -37196992 - Lx7 LINE L1 -19 7677 6983 1 1218 227 388 29 10 chr13 83087320 83087424 -37196888 + MLT1H-int LTR MaLR 484 589 -820 1 1218 22 0 0 0 chr13 83089003 83089025 -37195287 + AT_rich Low_complexity Low_complexity 1 22 0 1 1218 1312 307 114 81 chr13 83089585 83090033 -37194279 - Lx8 LINE L1 -641 7055 6660 1 1218 2332 96 3 6 chr13 83090033 83090369 -37193943 - L1_Mus2 LINE L1 0 6566 6232 1 1218 1312 302 123 88 chr13 83090369 83090765 -37193547 - Lx8 LINE L1 -814 6659 6196 1 1218 1824 304 85 38 chr13 83090793 83091792 -37192520 - Lx8 LINE L1 -20 5860 4815 1 1218 409 196 14 36 chr13 83092253 83092391 -37191921 + Lx9 LINE L1 7384 7518 -126 1 1218 7255 100 10 12 chr13 83092441 83093731 -37190581 + L1_Mus3 LINE L1 5345 6632 -6 1 1218 348 282 73 28 chr13 83095060 83095239 -37189073 + Lx7 LINE L1 7027 7213 -483 1 1218 4543 69 24 14 chr13 83095292 83095913 -37188399 - L1_Mus1 LINE L1 0 6567 5941 1 1218 667 237 13 13 chr13 83095914 83096072 -37188240 + Lx7 LINE L1 7210 7367 -329 1 1218 576 245 40 18 chr13 83096176 83096374 -37187938 + Lx7 LINE L1 7559 7696 0 1 1218 475 351 52 16 chr13 83096424 83096615 -37187697 - B3A SINE B2 0 198 1 1 1218 1438 181 75 109 chr13 83096685 83097125 -37187187 - RLTR23 LTR ERV1 0 430 6 1 1218 1590 77 0 0 chr13 83098285 83098505 -37185807 + L1Md_F2 LINE L1 6363 6582 0 1 1218 579 88 12 0 chr13 83098829 83098909 -37185403 - B1_Mus2 SINE Alu 0 147 67 1 1218 432 0 0 0 chr13 83098912 83098960 -37185352 + (TTTTA)n Simple_repeat Simple_repeat 3 50 0 1 1218 1448 191 11 0 chr13 83098960 83099233 -37185079 - Lx2 LINE L1 -26 6971 6696 1 152 1242 251 55 62 chr13 83099258 83099696 -37184616 - Lx9 LINE L1 -2 7642 7208 1 1219 3405 146 36 2 chr13 83099694 83100265 -37184047 + L1MA9 LINE L1 5105 5721 -165 1 1219 1159 68 0 0 chr13 83100265 83100411 -37183901 - B1_Mus1 SINE Alu -1 147 2 1 1219 3324 199 100 1 chr13 83100411 83100559 -37183753 + L1MA9 LINE L1 5722 5940 -224 1 1219 1340 294 33 18 chr13 83100614 83101008 -37183304 - MTD LTR MaLR -2 417 18 1 1219 297 270 60 12 chr13 83101087 83101296 -37183016 + L1MA9 LINE L1 6055 6278 -13 1 1219 489 51 244 0 chr13 83101793 83101871 -37182441 - BC1_Mm scRNA scRNA -54 98 2 1 1219 498 17 0 0 chr13 83102577 83102636 -37181676 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1219 303 49 0 0 chr13 83102914 83102955 -37181357 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1219 1821 100 0 0 chr13 83103011 83103261 -37181051 + MT2C_Mm LTR ERVL 1 250 -225 1 1219 2322 268 32 16 chr13 83103481 83103805 -37180507 - Lx7 LINE L1 -641 7055 6731 1 1219 368 91 0 15 chr13 83103805 83103872 -37180440 + (TTG)n Simple_repeat Simple_repeat 1 66 0 1 1219 2322 268 32 16 chr13 83103872 83104166 -37180146 - Lx7 LINE L1 -966 6730 6428 1 1219 361 275 65 26 chr13 83104259 83104412 -37179900 - L1M5 LINE L1 -3654 2492 2334 1 1219 191 36 36 0 chr13 83104422 83104450 -37179862 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 1219 184 361 112 21 chr13 83104631 83104818 -37179494 - MIRb SINE MIR -57 211 8 1 1219 348 305 96 12 chr13 83105529 83105695 -37178617 + L1ME3B LINE L1 5821 6000 -240 1 1219 211 220 0 0 chr13 83105706 83105756 -37178556 + A-rich Low_complexity Low_complexity 1 50 0 1 1219 260 326 137 7 chr13 83106010 83106149 -37178163 + B4A SINE B4 63 219 -73 1 1219 22 56 0 0 chr13 83106264 83106300 -37178012 + AT_rich Low_complexity Low_complexity 1 36 0 1 1219 498 46 0 0 chr13 83106380 83106445 -37177867 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1219 2230 179 184 19 chr13 83106896 83107488 -37176824 + RMER6C LTR ERVK 1 690 0 1 1219 395 351 52 52 chr13 83107614 83107788 -37176524 - B3A SINE B2 0 198 25 1 1219 23 33 0 0 chr13 83109317 83109347 -37174965 + AT_rich Low_complexity Low_complexity 1 30 0 1 1219 261 229 33 0 chr13 83109556 83109617 -37174695 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 1 1219 693 0 0 0 chr13 83112222 83112299 -37172013 + (GAA)n Simple_repeat Simple_repeat 2 78 0 1 1219 854 73 8 0 chr13 83112299 83112422 -37171890 + (GGGA)n Simple_repeat Simple_repeat 3 126 0 1 1219 387 0 0 0 chr13 83113809 83113852 -37170460 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1219 378 0 0 0 chr13 83114912 83114954 -37169358 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1 1219 280 286 80 48 chr13 83115631 83115756 -37168556 - B1F SINE Alu -6 143 15 1 1219 235 260 28 83 chr13 83116474 83116583 -37167729 - RMER4A LTR ERVK -75 391 289 1 1219 1927 189 57 6 chr13 83116583 83116949 -37167363 - Lx4B LINE L1 -17 7041 6657 1 1219 2535 143 0 0 chr13 83116947 83117408 -37166904 + Lx4B LINE L1 5521 5987 -1071 1 1219 1471 174 91 65 chr13 83118661 83119000 -37165312 + ORR1B1 LTR MaLR 47 394 0 1 1219 237 256 57 143 chr13 83119033 83119138 -37165174 + MLT1D LTR MaLR 88 183 -322 1 1219 1613 70 14 0 chr13 83119344 83119558 -37164754 + L1_Mus2 LINE L1 6350 6566 0 1 1219 314 227 143 56 chr13 83119729 83119855 -37164457 - MLT1E2 LTR MaLR -12 615 479 1 1219 467 314 80 34 chr13 83120551 83120788 -37163524 + LTR16A1 LTR ERVL 208 455 -1 1 1219 24 32 0 0 chr13 83121144 83121175 -37163137 + AT_rich Low_complexity Low_complexity 1 31 0 1 1219 536 213 115 0 chr13 83121214 83121336 -37162976 + B1_Mus1 SINE Alu 2 137 -11 1 1219 1062 75 0 20 chr13 83121774 83121924 -37162388 - B1_Mus2 SINE Alu 0 147 1 1 1219 218 211 19 0 chr13 83123312 83123364 -37160948 + CT-rich Low_complexity Low_complexity 2 54 0 1 1219 5065 79 1 1 chr13 83123674 83124343 -37159969 - Lx3_Mus LINE L1 -209 6800 6132 1 1219 1491 248 23 68 chr13 83124344 83124782 -37159530 + Lx4B LINE L1 6592 7009 -49 1 1219 243 0 0 0 chr13 83124798 83124825 -37159487 + (TAGA)n Simple_repeat Simple_repeat 1 27 0 1 1219 1849 264 11 44 chr13 83124825 83125195 -37159117 + Lx7 LINE L1 7004 7363 -333 1 1219 192 40 0 0 chr13 83125195 83125220 -37159092 + (TTTG)n Simple_repeat Simple_repeat 3 27 0 1 1219 1849 264 11 44 chr13 83125220 83125372 -37158940 + Lx7 LINE L1 7364 7509 -187 1 1219 552 65 0 0 chr13 83125430 83125507 -37158805 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 1219 2482 185 68 43 chr13 83125698 83126211 -37158101 - RMER1B Other Other -4 1062 537 1 1219 239 343 76 29 chr13 83126506 83126611 -37157701 + MER20 DNA MER1_type 7 116 -103 1 1219 2392 296 76 71 chr13 83126709 83127827 -37156485 + Lx9 LINE L1 6341 7464 -180 1 1219 1050 95 0 0 chr13 83127874 83128053 -37156259 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 1219 207 0 0 0 chr13 83128053 83128075 -37156237 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1219 25 31 0 0 chr13 83128172 83128204 -37156108 + AT_rich Low_complexity Low_complexity 1 32 0 1 1219 275 304 12 37 chr13 83128270 83128352 -37155960 + ID4 SINE ID 2 81 -2 1 1219 553 307 73 19 chr13 83128474 83128680 -37155632 + B4 SINE B4 4 220 -72 1 1219 464 186 0 9 chr13 83128746 83128860 -37155452 + (CA)n Simple_repeat Simple_repeat 2 114 0 1 1219 909 74 0 0 chr13 83128860 83128981 -37155331 + L1_Mus2 LINE L1 6391 6511 -55 1 1219 2381 58 42 27 chr13 83129414 83129749 -37154563 - L1_Mus2 LINE L1 0 6566 6227 1 1219 29 28 0 0 chr13 83129838 83129874 -37154438 + AT_rich Low_complexity Low_complexity 1 36 0 1 1219 1505 220 33 46 chr13 83130144 83130302 -37154010 + ORR1B2 LTR MaLR 6 155 -212 1 1219 504 0 0 0 chr13 83130302 83130358 -37153954 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1219 1505 220 33 46 chr13 83130358 83130566 -37153746 + ORR1B2 LTR MaLR 156 366 -1 1 1219 3773 174 147 20 chr13 83130560 83130664 -37153648 + ORR1B2-int LTR MaLR 2 93 -1416 1 1219 3279 73 0 41 chr13 83130664 83130685 -37153627 + L1_Mus1 LINE L1 6128 6147 -420 1 1219 1134 76 0 0 chr13 83130685 83130830 -37153482 - B1_Mm SINE Alu -1 146 2 1 1219 3279 73 0 41 chr13 83130830 83131267 -37153045 + L1_Mus1 LINE L1 6148 6567 0 1 1219 3773 174 147 20 chr13 83131267 83132001 -37152311 + ORR1B2-int LTR MaLR 94 946 -563 1 1219 709 215 115 183 chr13 83131996 83132086 -37152226 + ORR1B2-int LTR MaLR 1565 1647 -316 1 1219 741 96 0 0 chr13 83132086 83132211 -37152101 + (GA)n Simple_repeat Simple_repeat 1 125 0 1 1219 1640 181 60 27 chr13 83132211 83132547 -37151765 + ORR1B2-int LTR MaLR 1163 1508 -1 1 1219 353 207 33 33 chr13 83132549 83132639 -37151673 + ORR1B2 LTR MaLR 292 381 -13 1 1219 243 327 42 12 chr13 83132662 83132829 -37151483 + L1MB8 LINE L1 6000 6171 -7 1 1219 340 285 61 31 chr13 83132937 83133165 -37151147 - L1MD LINE L1 -1501 4645 4411 1 1219 30 27 0 0 chr13 83133182 83133219 -37151093 + AT_rich Low_complexity Low_complexity 1 37 0 1 1219 2323 182 5 2 chr13 83133237 83133649 -37150663 + Lx2B LINE L1 6184 6596 -404 1 1219 1024 204 61 9 chr13 83133649 83133862 -37150450 + RLTR17 LTR ERVK 275 498 -194 1 1219 358 341 105 53 chr13 83133936 83134034 -37150278 - MLT2B4 LTR ERVL -256 300 205 1 1219 4936 85 30 126 chr13 83134034 83135015 -37149297 - RMER17D LTR ERVK -3 886 1 2 1219 358 341 105 53 chr13 83135015 83135201 -37149111 - MLT2B4 LTR ERVL -352 204 1 1 1219 1207 274 77 24 chr13 83135255 83135591 -37148721 - ORR1D2 LTR MaLR -7 363 10 2 1219 1432 109 9 18 chr13 83135711 83135936 -37148376 - Lx2 LINE L1 0 6997 6775 2 1219 3050 121 41 14 chr13 83135936 83136187 -37148125 - Lx2 LINE L1 -354 6643 6399 2 1219 1708 120 283 53 chr13 83136187 83136618 -37147694 - RLTR47_MM LTR ERV1 -2 530 1 2 1219 3050 121 41 14 chr13 83136618 83136852 -37147460 - Lx2 LINE L1 -599 6398 6145 2 1219 2048 98 75 137 chr13 83136867 83137305 -37147007 + RMER16 LTR ERVK 60 470 -63 2 1219 413 0 39 0 chr13 83137305 83137357 -37146955 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 2 1219 537 175 16 0 chr13 83137378 83137504 -37146808 - Lx2 LINE L1 -847 6150 6023 2 1219 395 297 62 68 chr13 83137537 83137714 -37146598 + Lx9 LINE L1 7239 7414 -230 2 1219 1671 154 11 114 chr13 83137714 83138066 -37146246 - ORR1A4 LTR MaLR -2 327 12 2 1219 220 190 25 0 chr13 83138499 83138578 -37145734 + (TA)n Simple_repeat Simple_repeat 1 81 0 2 1219 282 49 73 0 chr13 83138607 83138648 -37145664 + ORR1D1 LTR MaLR 12 55 -274 2 1219 504 0 0 0 chr13 83138648 83138704 -37145608 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 2 1219 504 305 61 19 chr13 83138768 83138982 -37145330 - Lx9 LINE L1 -199 7445 7223 2 1219 21 57 0 0 chr13 83138983 83139018 -37145294 + AT_rich Low_complexity Low_complexity 1 35 0 2 1219 725 324 89 35 chr13 83139103 83140163 -37144149 - L1MD2 LINE L1 -4800 1840 733 2 1219 1458 272 50 8 chr13 83140167 83140548 -37143764 - MTD LTR MaLR -5 414 18 2 1219 1920 152 32 15 chr13 83140689 83140745 -37143567 - ORR1A1 LTR MaLR 0 346 291 2 1219 2420 55 0 0 chr13 83140745 83141052 -37143260 - L1Md_A LINE L1 -3 6579 6273 2 1219 1920 152 32 15 chr13 83141052 83141335 -37142977 - ORR1A1 LTR MaLR -56 290 2 2 1219 218 191 21 0 chr13 83141335 83141382 -37142930 + (CAGAGA)n Simple_repeat Simple_repeat 2 49 0 2 1219 26607 166 72 5 chr13 83142055 83143253 -37141059 + L1_Mus3 LINE L1 395 1682 -4201 2 1219 303 28 0 0 chr13 83143253 83143289 -37141023 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 2 1219 26607 139 11 3 chr13 83143289 83148197 -37136115 + L1_Mus3 LINE L1 1683 6635 -3 2 1219 215 103 0 25 chr13 83148200 83148240 -37136072 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 2 1219 912 335 75 40 chr13 83148750 83149421 -37134891 - Lx9 LINE L1 -184 7460 6873 2 1219 364 158 0 0 chr13 83149426 83149483 -37134829 - RMER15-int LTR ERVL -373 4626 4570 2 1219 2334 249 42 52 chr13 83149539 83150349 -37133963 + ORR1D1-int LTR MaLR 47 905 -675 2 1219 2270 196 99 47 chr13 83150350 83150884 -37133428 + RLTR20D LTR ERVK 1 562 -6 2 1219 2102 211 61 40 chr13 83150961 83151456 -37132856 + ORR1D1-int LTR MaLR 866 1370 0 2 1219 431 258 39 24 chr13 83151456 83151583 -37132729 + ORR1D1 LTR MaLR 1 129 -245 2 1219 387 105 0 0 chr13 83152005 83152062 -37132250 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1219 6773 134 11 14 chr13 83152373 83153618 -37130694 + Lx LINE L1 5400 6648 -6 2 1219 25 65 0 0 chr13 83153680 83153726 -37130586 + AT_rich Low_complexity Low_complexity 1 46 0 2 1219 1568 212 30 127 chr13 83154085 83154556 -37129756 + RMER20B LTR ERVK 203 627 0 2 1219 627 98 0 0 chr13 83155227 83155319 -37128993 + (CA)n Simple_repeat Simple_repeat 1 92 0 2 1219 639 39 0 0 chr13 83158629 83158707 -37125605 + (GA)n Simple_repeat Simple_repeat 2 79 0 2 1219 249 224 0 0 chr13 83161043 83161101 -37123211 + CT-rich Low_complexity Low_complexity 3 60 0 2 1219 753 163 0 0 chr13 83161962 83162097 -37122215 + CT-rich Low_complexity Low_complexity 3 137 0 2 1219 450 0 0 0 chr13 83162257 83162307 -37122005 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2 1219 275 279 186 58 chr13 83162308 83162464 -37121848 + MIRb SINE MIR 17 192 -76 2 1219 500 0 0 16 chr13 83164957 83165018 -37119294 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1219 579 15 0 0 chr13 83165018 83165085 -37119227 + (GA)n Simple_repeat Simple_repeat 2 69 0 2 1219 294 302 124 0 chr13 83167389 83167518 -37116794 + L1MEg LINE L1 1217 1361 -4723 2 1219 200 312 0 0 chr13 83168538 83168615 -37115697 + T-rich Low_complexity Low_complexity 5 81 0 2 1219 535 314 192 54 chr13 83168823 83169136 -37115176 + MTD LTR MaLR 6 361 -58 2 1219 2721 314 50 79 chr13 83169174 83170336 -37113976 + ORR1E-int LTR MaLR 5 1104 -266 2 1219 2983 61 11 0 chr13 83170336 83170713 -37113599 + L1_Mus1 LINE L1 6183 6563 -4 2 1219 2721 314 50 79 chr13 83170713 83170948 -37113364 + ORR1E-int LTR MaLR 1105 1361 -9 2 1219 700 300 50 84 chr13 83170958 83171126 -37113186 + ORR1E LTR MaLR 3 182 -177 2 1219 240 86 0 0 chr13 83171126 83171161 -37113151 + (CCTG)n Simple_repeat Simple_repeat 1 35 0 2 1219 606 39 0 0 chr13 83171161 83171238 -37113074 + (TC)n Simple_repeat Simple_repeat 2 78 0 2 1219 345 24 0 0 chr13 83171238 83171279 -37113033 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1219 700 298 57 85 chr13 83171279 83171456 -37112856 + ORR1E LTR MaLR 183 355 -4 2 1219 243 0 0 0 chr13 83171938 83171965 -37112347 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1219 7959 52 0 4 chr13 83171985 83173053 -37111259 - L1Md_F2 LINE L1 -12 6570 5507 2 1219 296 323 10 30 chr13 83173241 83173340 -37110972 - RSINE1 SINE B4 -66 99 3 2 1219 7823 155 29 49 chr13 83173347 83173502 -37110810 - Lx4A LINE L1 0 7058 6907 2 1219 286 79 0 0 chr13 83173502 83173540 -37110772 + U2 snRNA snRNA 1 38 -150 2 1219 7823 155 29 49 chr13 83173540 83174823 -37109489 - Lx4A LINE L1 0 6906 5639 2 1219 212 367 17 0 chr13 83174839 83174899 -37109413 - RSINE1 SINE B4 -5 160 100 2 1219 1007 293 57 38 chr13 83174983 83175355 -37108957 - MTEb LTR MaLR 0 379 1 2 1219 745 149 18 12 chr13 83175916 83176079 -37108233 + CT-rich Low_complexity Low_complexity 5 168 0 2 1219 1068 107 5 14 chr13 83176084 83176295 -37108017 + (TTCTCC)n Simple_repeat Simple_repeat 1 208 0 2 1219 1212 269 79 6 chr13 83176369 83176709 -37107603 - Lx6 LINE L1 -9 7451 7087 2 1219 25 0 0 0 chr13 83177156 83177181 -37107131 + AT_rich Low_complexity Low_complexity 1 25 0 2 1219 219 239 0 0 chr13 83177195 83177241 -37107071 + A-rich Low_complexity Low_complexity 3 48 0 2 1219 29 28 0 0 chr13 83177325 83177361 -37106951 + AT_rich Low_complexity Low_complexity 1 36 0 2 1219 558 67 0 0 chr13 83177426 83177501 -37106811 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 1219 406 367 0 0 chr13 83177530 83177677 -37106635 - B3A SINE B2 -48 150 4 2 1219 822 255 231 3 chr13 83179525 83179853 -37104459 + MTD LTR MaLR 3 405 -14 2 1219 374 251 41 42 chr13 83179866 83180022 -37104290 + MTD-int LTR MaLR 1 153 -1217 2 1219 621 160 6 0 chr13 83180942 83181274 -37103038 + (CAGAGA)n Simple_repeat Simple_repeat 1 333 0 2 1219 216 210 0 0 chr13 83181290 83181371 -37102941 + (CAGAGA)n Simple_repeat Simple_repeat 4 84 0 2 1219 425 315 13 20 chr13 83181606 83181755 -37102557 - B4A SINE B4 0 292 145 2 1219 332 261 77 33 chr13 83181761 83181852 -37102460 - B1_Mus2 SINE Alu -51 96 2 2 1219 1560 81 4 82 chr13 83181852 83182037 -37102275 - MT2B LTR ERVL -436 165 1 2 1219 302 347 62 90 chr13 83185639 83185883 -37098429 + LTR33 LTR ERVL 38 274 -241 2 1219 275 188 0 19 chr13 83186099 83186202 -37098110 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 2 1219 23 54 0 0 chr13 83186240 83186277 -37098035 + AT_rich Low_complexity Low_complexity 1 37 0 2 1219 350 109 0 30 chr13 83186417 83186483 -37097829 + (TTTTC)n Simple_repeat Simple_repeat 2 65 0 2 1219 383 83 0 16 chr13 83186878 83186939 -37097373 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1219 2038 188 22 20 chr13 83186972 83187378 -37096934 + MTB_Mm LTR MaLR 1 407 0 2 1219 529 212 13 13 chr13 83187414 83187572 -37096740 + (CATA)n Simple_repeat Simple_repeat 3 160 0 2 1219 6343 122 19 2 chr13 83187682 83188726 -37095586 + L1_Mus3 LINE L1 4853 5921 -717 2 1219 423 0 0 0 chr13 83188733 83188780 -37095532 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1219 12655 36 4 3 chr13 83188780 83190973 -37093339 - L1Md_F2 LINE L1 -18 6564 4372 2 1219 4101 102 12 54 chr13 83190973 83191636 -37092676 + L1_Mus3 LINE L1 6004 6638 0 2 1219 1115 34 0 58 chr13 83191755 83191911 -37092401 - B1_Mus1 SINE Alu 0 148 2 2 1219 460 164 50 45 chr13 83192335 83192514 -37091798 + CT-rich Low_complexity Low_complexity 1 180 0 2 1219 328 346 28 0 chr13 83192520 83192627 -37091685 + C-rich Low_complexity Low_complexity 6 115 0 2 1219 348 111 0 0 chr13 83192627 83192681 -37091631 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 2 1219 1939 100 43 13 chr13 83192691 83192995 -37091317 - L1_Mus4 LINE L1 0 6636 6324 2 1219 406 339 58 0 chr13 83196125 83196246 -37088066 + ID_B1 SINE B4 92 219 -5 2 1219 221 77 0 49 chr13 83196248 83196289 -37088023 + (CAAAAA)n Simple_repeat Simple_repeat 4 42 0 2 1219 764 60 8 8 chr13 83196330 83196547 -37087765 - L1Md_F2 LINE L1 0 6582 6442 2 1219 297 130 0 69 chr13 83196536 83196594 -37087718 + L1_Mus1 LINE L1 6387 6440 -127 2 1219 232 326 45 0 chr13 83196612 83196701 -37087611 - MIR SINE MIR -153 109 17 2 1219 189 0 0 0 chr13 83197077 83197098 -37087214 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1219 36 0 0 0 chr13 83197661 83197697 -37086615 + AT_rich Low_complexity Low_complexity 1 36 0 2 1219 288 343 0 36 chr13 83199340 83199452 -37084860 - ID4 SINE ID -43 109 2 2 1219 442 289 80 40 chr13 83199455 83199779 -37084533 - L1MA8 LINE L1 -6 6285 5949 2 1219 278 376 64 45 chr13 83200052 83200208 -37084104 - B4 SINE B4 -118 174 16 2 1219 282 29 0 0 chr13 83201660 83201695 -37082617 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1219 314 254 64 60 chr13 83205905 83206123 -37078189 + Lx7 LINE L1 7478 7696 0 2 1219 23 33 0 0 chr13 83206170 83206200 -37078112 + AT_rich Low_complexity Low_complexity 1 30 0 2 1219 291 122 0 0 chr13 83206285 83206334 -37077978 + (TCCC)n Simple_repeat Simple_repeat 1 49 0 2 1219 184 345 60 40 chr13 83207016 83207167 -37077145 + L2a LINE L2 3264 3417 -9 2 1219 252 0 0 0 chr13 83208206 83208234 -37076078 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 2 1219 9863 91 23 18 chr13 83208797 83210275 -37074037 - Lx3_Mus LINE L1 0 7009 5529 2 1219 213 378 40 7 chr13 83212375 83212524 -37071788 - MIR3 SINE MIR -1 207 54 2 1219 21 57 0 0 chr13 83214137 83214172 -37070140 + AT_rich Low_complexity Low_complexity 1 35 0 2 1219 913 293 16 45 chr13 83214843 83215154 -37069158 + Tigger12A DNA MER2_type 38 339 -452 2 1219 1967 124 62 0 chr13 83217142 83217449 -37066863 + ORR1A3 LTR MaLR 1 326 0 2 1219 536 295 75 6 chr13 83218587 83218761 -37065551 - MLT1A0 LTR MaLR -17 348 163 3 1219 22 0 0 0 chr13 83218771 83218793 -37065519 + AT_rich Low_complexity Low_complexity 1 22 0 3 1219 319 302 0 11 chr13 83218793 83218880 -37065432 - MLT1A0 LTR MaLR -278 87 2 3 1219 233 230 78 33 chr13 83219389 83219479 -37064833 - MLT1A1 LTR MaLR -8 400 307 3 1219 285 332 128 44 chr13 83219871 83220098 -37064214 + MIR SINE MIR 12 257 -5 3 1219 221 194 176 15 chr13 83220221 83220289 -37064023 + PB1D10 SINE Alu 33 111 -6 3 1219 229 250 39 160 chr13 83222330 83222511 -37061801 - L2b LINE L2 -150 3237 3079 3 1219 1051 223 5 5 chr13 83223298 83223519 -37060793 + URR1B DNA MER1_type 1 221 -4 3 1219 24 67 0 0 chr13 83223817 83223862 -37060450 + AT_rich Low_complexity Low_complexity 1 45 0 3 1219 1516 168 97 7 chr13 83224013 83224312 -37060000 + ORR1A3 LTR MaLR 1 326 0 3 1219 681 248 148 22 chr13 83224312 83224672 -37059640 + MTD LTR MaLR 9 416 -3 3 1219 575 14 0 0 chr13 83224672 83224745 -37059567 + L1Md_T LINE L1 6509 6581 -1 3 1219 326 208 65 0 chr13 83225802 83225879 -37058433 + Lx6 LINE L1 6646 6727 -733 3 1219 4834 174 29 5 chr13 83225871 83226342 -37057970 + L1_Mur2 LINE L1 4833 5302 -575 3 1219 792 21 0 0 chr13 83226342 83226436 -37057876 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 3 1219 4834 174 29 5 chr13 83226436 83226904 -37057408 + L1_Mur2 LINE L1 5303 5792 -85 3 1219 5249 36 6 0 chr13 83226904 83227534 -37056778 + L1Md_F2 LINE L1 5949 6582 0 3 1219 5575 187 53 5 chr13 83227536 83228576 -37055736 + Lx2B LINE L1 5783 6874 -126 3 1219 2913 60 36 3 chr13 83228576 83228963 -37055349 - MTB LTR MaLR 0 400 1 3 1219 5575 187 53 5 chr13 83228963 83229070 -37055242 + Lx2B LINE L1 6875 6984 -16 3 1219 2365 230 19 15 chr13 83229094 83229624 -37054688 + Lx6 LINE L1 6753 7284 -176 3 1219 428 203 147 47 chr13 83229651 83229780 -37054532 + B1_Mur3 SINE Alu 2 143 -6 3 1219 345 47 0 0 chr13 83229783 83229826 -37054486 + (TGAA)n Simple_repeat Simple_repeat 2 44 0 3 1219 21 0 0 0 chr13 83230145 83230166 -37054146 + AT_rich Low_complexity Low_complexity 1 21 0 3 1219 413 176 59 146 chr13 83230193 83230432 -37053880 + Lx7 LINE L1 7358 7575 -121 3 1219 26 50 0 0 chr13 83230436 83230476 -37053836 + AT_rich Low_complexity Low_complexity 1 40 0 3 152 732 248 64 111 chr13 83230530 83231132 -37053180 - RLTR12B LTR ERVK -9 519 1 3 1220 324 316 0 0 chr13 83231201 83231296 -37053016 - Lx5 LINE L1 -470 6580 6486 3 1220 7197 100 13 2 chr13 83231588 83233297 -37051015 - L1_Mus3 LINE L1 -4 6634 4908 3 1220 340 271 15 8 chr13 83233301 83233431 -37050881 + Lx7 LINE L1 7565 7695 -1 3 1220 1412 244 111 18 chr13 83233671 83234224 -37050088 - Lx9 LINE L1 -1687 5957 5327 3 1220 1214 55 0 0 chr13 83234243 83234389 -37049923 - B1_Mus2 SINE Alu 0 147 2 3 1220 226 75 0 24 chr13 83234394 83234435 -37049877 - L1_Rod LINE L1 -510 5337 5298 3 1220 675 161 154 103 chr13 83235352 83235566 -37048746 + URR1A DNA MER1_type 2 226 0 3 1220 2178 192 10 10 chr13 83235694 83236088 -37048224 - ORR1B1 LTR MaLR 0 394 1 3 1220 1536 22 0 0 chr13 83236212 83236392 -37047920 + (TTC)n Simple_repeat Simple_repeat 1 180 0 3 1220 389 297 62 8 chr13 83236394 83236523 -37047789 + polypyrimidine Low_complexity Low_complexity 6 141 0 3 1220 302 338 52 33 chr13 83236523 83236676 -37047636 - HAL1-3A_ME LINE L1 -419 2439 2284 3 1220 240 143 0 0 chr13 83236677 83236719 -37047593 + (TTCTCC)n Simple_repeat Simple_repeat 2 43 0 3 1220 364 323 50 0 chr13 83237720 83237819 -37046493 - PB1D10 SINE Alu -8 109 6 3 1220 682 297 88 13 chr13 83238337 83238576 -37045736 + MTEb LTR MaLR 123 379 0 3 1220 489 141 0 0 chr13 83240028 83240127 -37044185 + (GA)n Simple_repeat Simple_repeat 2 100 0 3 1220 555 180 5 0 chr13 83241026 83241234 -37043078 + CT-rich Low_complexity Low_complexity 1 209 0 3 1220 262 242 35 46 chr13 83241307 83241377 -37042935 + ORR1E LTR MaLR 260 341 -38 3 1220 912 305 45 6 chr13 83241377 83241736 -37042576 - MTE2b LTR MaLR -3 376 4 3 1220 262 246 38 49 chr13 83241736 83241773 -37042539 + ORR1E LTR MaLR 321 376 -3 3 1220 33 25 0 0 chr13 83242538 83242578 -37041734 + AT_rich Low_complexity Low_complexity 1 40 0 3 1220 654 283 12 12 chr13 83242702 83242956 -37041356 - L1MA4 LINE L1 -446 5854 5601 3 1220 866 92 46 0 chr13 83242958 83243111 -37041201 + (TTCC)n Simple_repeat Simple_repeat 2 161 0 3 1220 366 100 0 48 chr13 83243111 83243174 -37041138 + (TTTC)n Simple_repeat Simple_repeat 3 62 0 3 1220 189 0 0 0 chr13 83243386 83243407 -37040905 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1220 360 0 0 0 chr13 83243407 83243446 -37040866 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 1220 1480 146 20 84 chr13 83244619 83244963 -37039349 - RLTRETN_Mm LTR ERVK 0 322 1 3 1220 250 266 41 49 chr13 83245556 83245678 -37038634 + ORR1D2 LTR MaLR 53 162 -208 3 1220 1858 208 7 70 chr13 83245777 83246250 -37038062 + Lx5 LINE L1 6311 6773 -227 3 1220 683 314 15 0 chr13 83246617 83246821 -37037491 - MTEb LTR MaLR -7 372 166 3 1220 663 13 0 0 chr13 83246924 83247000 -37037312 + (GA)n Simple_repeat Simple_repeat 2 77 0 3 1220 800 48 9 0 chr13 83247000 83247105 -37037207 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 3 1220 422 347 108 31 chr13 83247665 83247951 -37036361 - ORR1E LTR MaLR 0 359 52 3 1220 325 346 83 63 chr13 83248155 83248458 -37035854 + B4 SINE B4 1 276 -16 3 1220 585 28 0 0 chr13 83248475 83248546 -37035766 + (CA)n Simple_repeat Simple_repeat 1 71 0 3 1220 298 258 90 9 chr13 83248618 83248805 -37035507 + L1_Mur3 LINE L1 5226 5438 -445 3 1220 531 31 0 0 chr13 83248808 83248873 -37035439 + (TG)n Simple_repeat Simple_repeat 1 65 0 3 1220 180 0 0 0 chr13 83249171 83249191 -37035121 + (TAA)n Simple_repeat Simple_repeat 2 21 0 3 1220 26 50 0 0 chr13 83251019 83251059 -37033253 + AT_rich Low_complexity Low_complexity 1 40 0 3 1220 225 0 0 0 chr13 83251458 83251483 -37032829 + (TG)n Simple_repeat Simple_repeat 2 26 0 3 1220 468 0 0 0 chr13 83252573 83252625 -37031687 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1220 1236 219 161 15 chr13 83252648 83252978 -37031334 - ORR1C1 LTR MaLR 0 378 1 3 1220 5452 218 73 25 chr13 83252978 83254307 -37030005 - ORR1C1-int LTR MaLR 0 1509 117 3 1220 739 206 12 48 chr13 83254282 83254450 -37029862 - ORR1C1 LTR MaLR -13 354 193 3 1220 260 174 0 0 chr13 83255289 83255335 -37028977 - MT2B2 LTR ERVL 0 533 488 3 1220 243 0 0 0 chr13 83255440 83255467 -37028845 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1220 492 18 0 0 chr13 83255467 83255523 -37028789 + (GA)n Simple_repeat Simple_repeat 2 58 0 3 1220 797 229 137 26 chr13 83255523 83255843 -37028469 - MT2B LTR ERVL -62 539 84 3 1220 5389 130 17 28 chr13 83255846 83256718 -37027594 + Lx2 LINE L1 6135 6997 0 3 1220 387 0 0 0 chr13 83256967 83257010 -37027302 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1220 288 70 0 0 chr13 83257064 83257107 -37027205 + (TATG)n Simple_repeat Simple_repeat 2 44 0 3 1220 1192 263 27 32 chr13 83257107 83257512 -37026800 - Lx6 LINE L1 -28 7432 7030 3 1220 3638 180 25 17 chr13 83257512 83258230 -37026082 - MERVL_2A-int LTR ERVL -4572 1189 466 3 1220 745 271 114 17 chr13 83258230 83258656 -37025656 - MT2B2 LTR ERVL -47 537 1 3 1220 209 325 22 67 chr13 83258951 83259040 -37025272 + L2c LINE L2 3299 3383 -4 3 1220 297 255 68 41 chr13 83261170 83261317 -37022995 - MLT1B LTR MaLR -3 362 212 3 1220 353 294 92 54 chr13 83261446 83261671 -37022641 - MLT1B LTR MaLR -145 229 4 3 1220 243 0 0 0 chr13 83262847 83262874 -37021438 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1220 225 94 0 0 chr13 83265743 83265775 -37018537 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1220 233 140 18 0 chr13 83266711 83266768 -37017544 + (TTATA)n Simple_repeat Simple_repeat 2 59 0 3 1220 24 32 0 0 chr13 83269013 83269044 -37015268 + AT_rich Low_complexity Low_complexity 1 31 0 3 1220 190 365 32 0 chr13 83269567 83269630 -37014682 + MIRb SINE MIR 24 88 -180 3 1220 218 261 0 0 chr13 83271295 83271341 -37012971 + CT-rich Low_complexity Low_complexity 1 46 0 3 1220 189 107 0 0 chr13 83271341 83271369 -37012943 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 3 1220 1531 262 30 10 chr13 83271793 83272186 -37012126 + MER121 Unknown Unknown 12 412 0 3 1220 843 136 32 0 chr13 83273523 83273678 -37010634 - RLTR10 LTR ERVK -4 386 227 3 1220 2073 32 29 118 chr13 83273770 83274119 -37010193 - RLTR10 LTR ERVK -72 318 1 3 1220 16109 22 0 13 chr13 83274121 83276091 -37008221 - RLTR10-int LTR ERVK -3 1984 41 3 1220 843 136 32 0 chr13 83276107 83276262 -37008050 - RLTR10 LTR ERVK -4 386 227 3 1220 2217 31 3 114 chr13 83276354 83276712 -37007600 - RLTR10 LTR ERVK -72 318 1 3 1220 252 0 0 0 chr13 83277476 83277504 -37006808 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1220 1042 88 0 14 chr13 83277504 83277643 -37006669 - B1_Mm SINE Alu -9 138 2 3 1220 225 351 12 38 chr13 83279338 83279418 -37004894 + 4.5SRNA scRNA scRNA 12 89 -5 3 1220 218 152 21 21 chr13 83281291 83281338 -37002974 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 3 1220 259 354 182 25 chr13 83282308 83282714 -37001598 - L2 LINE L2 -559 2860 2391 3 1220 594 41 0 0 chr13 83282919 83282992 -37001320 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1220 686 109 8 0 chr13 83283293 83283412 -37000900 + (TG)n Simple_repeat Simple_repeat 1 120 0 3 1220 440 250 11 0 chr13 83283569 83283657 -37000655 - RSINE1 SINE B4 0 165 77 3 1220 234 349 26 44 chr13 83283965 83284079 -37000233 - L2a LINE L2 0 3426 3315 3 1220 387 95 13 26 chr13 83286123 83286199 -36998113 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1220 25 31 0 0 chr13 83286729 83286761 -36997551 + AT_rich Low_complexity Low_complexity 1 32 0 3 1220 758 327 96 35 chr13 83288117 83288688 -36995624 - MER63C DNA AcHobo -271 659 54 3 1220 296 319 11 0 chr13 83289067 83289161 -36995151 - Tigger16a DNA Tigger -336 597 503 3 1220 372 71 0 0 chr13 83289287 83289343 -36994969 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1220 369 0 0 0 chr13 83289424 83289465 -36994847 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1220 429 116 0 0 chr13 83289699 83289768 -36994544 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1220 207 162 0 0 chr13 83290117 83290154 -36994158 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 4 1220 906 191 0 0 chr13 83290157 83290420 -36993892 + (TA)n Simple_repeat Simple_repeat 1 263 0 4 1220 333 328 32 16 chr13 83290434 83290558 -36993754 - RMER12 LTR ERVK -471 851 726 4 1220 226 370 52 38 chr13 83291018 83291229 -36993083 + L1M3e LINE L1 1456 1669 -5361 4 1220 1656 319 70 34 chr13 83292614 83293411 -36990901 - Lx8 LINE L1 -448 7025 6200 4 1220 348 24 0 0 chr13 83293420 83293461 -36990851 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1220 450 343 71 32 chr13 83293760 83294139 -36990173 + Lx8 LINE L1 7075 7468 -5 4 1220 375 308 73 28 chr13 83294245 83294422 -36989890 + MTEb LTR MaLR 27 211 -168 4 1220 307 217 111 0 chr13 83294660 83294773 -36989539 + L1MA9 LINE L1 5657 5780 -532 4 1220 612 285 0 14 chr13 83294776 83294915 -36989397 + ID_B1 SINE B4 86 222 -2 4 1220 565 302 89 24 chr13 83294941 83295321 -36988991 + L1MA9 LINE L1 5794 6198 -114 4 1220 231 215 92 0 chr13 83295338 83295403 -36988909 + L1MA9 LINE L1 6239 6309 -3 4 1220 348 319 59 23 chr13 83295395 83295733 -36988579 + L1MB7 LINE L1 1030 1492 -4925 4 1220 432 352 0 0 chr13 83296146 83296285 -36988027 + MIR SINE MIR 2 140 -122 4 1220 5501 78 0 9 chr13 83296552 83297316 -36986996 - L1_Mm LINE L1 -2324 3559 2803 4 1220 2972 74 10 10 chr13 83297316 83297723 -36986589 + L1Md_F2 LINE L1 6174 6580 -2 4 1220 666 272 136 32 chr13 83297729 83298318 -36985994 + L1MB7 LINE L1 4491 5140 -1181 4 1220 1331 199 34 15 chr13 83298330 83298596 -36985716 + RLTR17 LTR ERVK 192 462 -230 4 1220 374 306 69 75 chr13 83300339 83300498 -36983814 - ID_B1 SINE B4 -3 221 64 4 1220 402 284 104 63 chr13 83300511 83300733 -36983579 + L1MB7 LINE L1 5115 5345 -976 4 1220 553 320 122 23 chr13 83301045 83301722 -36982590 + L1MB7 LINE L1 5570 6337 -22 4 1220 243 380 98 75 chr13 83301782 83302209 -36982103 - LTR33 LTR ERVL -59 456 20 4 1220 1794 146 35 0 chr13 83303283 83303571 -36980741 - Lx2 LINE L1 -325 6672 6375 4 1220 1246 194 48 3 chr13 83303947 83304242 -36980070 + L1_Mur3 LINE L1 859 1166 -6562 4 1220 2656 214 71 22 chr13 83304243 83304373 -36979939 + L1_Mur3 LINE L1 1884 2024 -3853 4 1220 180 0 0 0 chr13 83304373 83304393 -36979919 + (CATATA)n Simple_repeat Simple_repeat 1 20 0 4 1220 2656 214 71 22 chr13 83304393 83304420 -36979892 + L1_Mur3 LINE L1 2025 2049 -3828 4 1220 348 24 0 0 chr13 83304420 83304461 -36979851 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1220 2656 224 72 25 chr13 83304461 83305125 -36979187 + L1_Mur3 LINE L1 2050 2783 -3363 4 1220 919 238 60 46 chr13 83305782 83306130 -36978182 + Lx9 LINE L1 7289 7641 -3 4 1220 1336 280 61 8 chr13 83306429 83306825 -36977487 + MTD LTR MaLR 1 417 -2 4 1220 22 88 0 0 chr13 83306828 83306885 -36977427 + AT_rich Low_complexity Low_complexity 1 57 0 4 1220 200 176 0 0 chr13 83306919 83306953 -36977359 + CT-rich Low_complexity Low_complexity 2 35 0 4 1220 500 285 36 0 chr13 83306954 83307091 -36977221 - B1_Mur4 SINE Alu -7 143 2 4 1220 289 265 77 8 chr13 83307105 83307231 -36977081 - Lx7 LINE L1 0 7696 7578 4 1220 1308 39 11 11 chr13 83307260 83307440 -36976872 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1220 589 212 0 25 chr13 83307468 83307589 -36976723 - Lx7 LINE L1 -665 7031 6914 4 1220 2094 271 58 45 chr13 83307608 83308094 -36976218 - Lx7 LINE L1 -1011 6685 6186 4 1220 225 0 0 0 chr13 83308094 83308119 -36976193 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1220 2094 271 58 45 chr13 83308119 83308338 -36975974 - Lx7 LINE L1 -1511 6185 5971 4 1220 731 108 9 0 chr13 83308342 83308453 -36975859 - URR1B DNA MER1_type 0 225 114 4 1220 6799 279 127 40 chr13 83308466 83309054 -36975258 - L1_Mur3 LINE L1 -588 5289 4658 4 1220 201 74 0 0 chr13 83309054 83309081 -36975231 + (CAT)n Simple_repeat Simple_repeat 1 27 0 4 1220 6799 279 127 40 chr13 83309081 83310326 -36973986 - L1_Mur3 LINE L1 -1220 4657 3477 4 1220 1202 85 6 0 chr13 83310326 83310503 -36973809 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 4 1220 6799 279 127 40 chr13 83310503 83312319 -36971993 - L1_Mur3 LINE L1 -2401 3476 1325 4 1220 378 0 0 0 chr13 83312370 83312412 -36971900 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1220 323 137 14 0 chr13 83312415 83312488 -36971824 + GA-rich Low_complexity Low_complexity 1 74 0 4 1220 400 307 47 0 chr13 83312507 83312722 -36971590 - L1_Mur3 LINE L1 -6483 1245 1021 4 1220 4071 54 0 2 chr13 83312753 83313250 -36971062 + L1_Mus1 LINE L1 6071 6566 -1 4 1220 271 263 63 0 chr13 83313277 83313372 -36970940 - L1_Mur3 LINE L1 -6786 942 842 4 1220 405 0 0 0 chr13 83314717 83314762 -36969550 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1220 428 233 25 0 chr13 83315726 83315846 -36968466 + Lx9 LINE L1 7520 7642 -2 4 1220 6997 169 48 13 chr13 83317473 83319254 -36965058 + Lx2B LINE L1 5163 6998 -2 4 1220 315 263 94 10 chr13 83319424 83319520 -36964792 + Cheshire DNA MER1_type 177 280 -2140 4 1220 40598 13 0 6 chr13 83319723 83326328 -36957984 - L1Md_A LINE L1 0 6582 21 4 1220 233 227 19 58 chr13 83327453 83327556 -36956756 + A-rich Low_complexity Low_complexity 5 103 0 4 1220 26 50 0 0 chr13 83327708 83327748 -36956564 + AT_rich Low_complexity Low_complexity 1 40 0 4 1220 249 119 0 0 chr13 83327817 83327859 -36956453 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 4 1220 835 156 11 96 chr13 83327862 83328039 -36956273 + ORR1A4 LTR MaLR 3 164 -165 4 1220 1041 112 6 0 chr13 83328035 83328196 -36956116 - ORR1A3-int LTR MaLR -1801 162 1 4 1220 1627 201 9 18 chr13 83328196 83328525 -36955787 - ORR1A3 LTR MaLR 0 326 1 4 1220 215 125 0 24 chr13 83328706 83328747 -36955565 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 1220 734 67 19 0 chr13 83328862 83328966 -36955346 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 4 1220 469 204 114 41 chr13 83328969 83329189 -36955123 + L1_Mur1 LINE L1 1538 1773 -4107 4 1220 1798 166 31 12 chr13 83329204 83329527 -36954785 - Lx2 LINE L1 -1 6996 6668 4 1220 421 223 80 204 chr13 83329594 83329685 -36954627 + L1_Mur1 LINE L1 3707 3798 -2082 4 1220 225 0 0 0 chr13 83329685 83329710 -36954602 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1220 333 0 0 0 chr13 83329710 83329746 -36954566 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 1220 421 223 80 204 chr13 83329746 83329952 -36954360 + L1_Mur1 LINE L1 3799 3967 -1913 4 1220 4748 156 133 7 chr13 83330427 83331730 -36952582 + L1_Mur1 LINE L1 3984 5619 -267 4 1220 1711 119 49 10 chr13 83331857 83332145 -36952167 - Lx LINE L1 0 6654 6356 4 1220 194 315 0 0 chr13 83332316 83332370 -36951942 - MIR SINE MIR -36 226 173 4 1220 3064 39 0 230 chr13 83332375 83332941 -36951371 + RLTR10C LTR ERVK 1 436 0 4 1220 2647 92 53 3 chr13 83332941 83333321 -36950991 + MMERVK10C-int LTR ERVK 1 399 -7182 4 1220 41364 44 1 2 chr13 83333319 83338265 -36946047 + MMERVK10C-int LTR ERVK 870 5810 -1771 4 1220 7673 50 4 1 chr13 83338251 83338294 -36946018 + MMERVK10C-int LTR ERVK 6646 6688 -893 4 1220 195 42 0 0 chr13 83338294 83338318 -36945994 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1220 7673 50 4 1 chr13 83338318 83339207 -36945105 + MMERVK10C-int LTR ERVK 6689 7580 -1 4 1220 3038 35 4 218 chr13 83339207 83339762 -36944550 + RLTR10C LTR ERVK 1 436 0 4 1220 21 0 0 0 chr13 83340447 83340468 -36943844 + AT_rich Low_complexity Low_complexity 1 21 0 4 1220 270 212 10 20 chr13 83342511 83342612 -36941700 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 1220 37 90 0 0 chr13 83342644 83342744 -36941568 + AT_rich Low_complexity Low_complexity 1 100 0 4 1220 246 207 17 0 chr13 83342847 83342905 -36941407 + L1M2 LINE L1 4725 4783 -1360 4 1220 630 302 107 33 chr13 83342922 83343473 -36940839 + Lx9 LINE L1 6942 7567 -77 4 1220 451 172 54 0 chr13 83343466 83343559 -36940753 + Lx9 LINE L1 7368 7465 -179 4 1220 1059 82 0 7 chr13 83343640 83343787 -36940525 + B1_Mus1 SINE Alu 1 146 -2 4 1220 506 349 58 85 chr13 83343891 83344254 -36940058 - MLT1A0 LTR MaLR -4 361 9 4 1220 5203 48 0 2 chr13 83344347 83344989 -36939323 - L1Md_F3 LINE L1 -1 6583 5943 4 1220 492 32 0 0 chr13 83345081 83345143 -36939169 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1220 931 279 106 25 chr13 83345166 83345715 -36938597 + L1M2 LINE L1 4123 4715 -1428 4 1220 399 212 240 25 chr13 83345975 83346096 -36938216 - B1_Mur2 SINE Alu -1 148 2 4 1220 972 102 12 18 chr13 83347679 83347849 -36936463 + (GGGAA)n Simple_repeat Simple_repeat 5 173 0 4 1220 501 226 69 78 chr13 83348591 83348836 -36935476 - Lx9 LINE L1 -3 7641 7399 4 1220 316 306 163 29 chr13 83348950 83349159 -36935153 - L2a LINE L2 0 3426 3190 4 1220 21 0 0 0 chr13 83350137 83350158 -36934154 + AT_rich Low_complexity Low_complexity 1 21 0 4 1220 23 54 0 0 chr13 83350451 83350488 -36933824 + AT_rich Low_complexity Low_complexity 1 37 0 4 1220 208 298 0 50 chr13 83350576 83350636 -36933676 - L2a LINE L2 -6 3420 3364 4 1220 1044 123 0 16 chr13 83352065 83352247 -36932065 - L1Md_F3 LINE L1 0 6584 6406 4 1220 608 311 112 32 chr13 83352330 83352579 -36931733 + B4A SINE B4 1 269 -23 4 1220 471 60 0 0 chr13 83352586 83352653 -36931659 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1220 486 0 0 0 chr13 83353182 83353236 -36931076 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1220 615 221 0 7 chr13 83353237 83353374 -36930938 + Lx4A LINE L1 6923 7058 0 4 1220 690 251 61 56 chr13 83353591 83353789 -36930523 - MER20 DNA MER1_type -20 199 1 4 1220 22 0 0 0 chr13 83357078 83357100 -36927212 + AT_rich Low_complexity Low_complexity 1 22 0 4 1220 211 150 25 0 chr13 83357249 83357289 -36927023 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 4 1220 363 274 0 23 chr13 83357300 83357386 -36926926 - RSINE1 SINE B4 0 165 82 4 1220 3703 91 22 71 chr13 83358017 83358607 -36925705 - L1_Mus3 LINE L1 0 6638 6078 4 1220 34 55 0 0 chr13 83358607 83358662 -36925650 + AT_rich Low_complexity Low_complexity 1 55 0 4 1220 323 344 0 0 chr13 83358827 83358917 -36925395 + PB1 SINE Alu 33 122 -5 4 1220 308 333 0 28 chr13 83358897 83359005 -36925307 + RMER12 LTR ERVK 746 850 -472 4 1220 387 0 0 0 chr13 83359013 83359056 -36925256 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1220 1123 69 7 0 chr13 83359536 83359680 -36924632 - B1_Mm SINE Alu -1 146 2 4 1220 319 224 71 0 chr13 83359754 83359852 -36924460 - L1MA4A LINE L1 -385 5918 5814 4 1220 1363 206 42 0 chr13 83359866 83360153 -36924159 - Lx3C LINE L1 -2 6974 6676 4 1220 651 206 116 72 chr13 83360157 83360367 -36923945 - ORR1D1 LTR MaLR -133 226 3 4 1220 311 372 0 11 chr13 83360482 83360577 -36923735 - B1F1 SINE Alu -46 103 10 4 1220 27 29 0 0 chr13 83360672 83360706 -36923606 + AT_rich Low_complexity Low_complexity 1 34 0 4 1220 669 213 82 0 chr13 83360736 83360943 -36923369 - Lx9 LINE L1 -7 7637 7414 4 1220 1119 238 17 0 chr13 83360947 83361187 -36923125 + Lx9 LINE L1 7169 7412 -232 4 1221 217 361 82 19 chr13 83362308 83362514 -36921798 + L2 LINE L2 2236 2454 -965 4 1221 374 350 32 0 chr13 83362728 83362851 -36921461 - MER20 DNA MER1_type -1 218 92 4 1221 1847 250 38 26 chr13 83362924 83363504 -36920808 - Lx9 LINE L1 0 7644 7058 4 1221 1874 30 0 0 chr13 83363527 83363757 -36920555 + L1VL1 LINE L1 721 950 -5472 4 1221 15385 96 20 2 chr13 83363749 83366013 -36918299 + L1_Mm LINE L1 1656 3959 -1924 4 1221 32775 70 3 0 chr13 83366012 83370446 -36913866 + L1Md_F2 LINE L1 1141 5586 -297 5 1221 7867 60 2 0 chr13 83370446 83371440 -36912872 + L1Md_F2 LINE L1 5587 6582 0 5 1221 25 31 0 0 chr13 83371945 83371977 -36912335 + AT_rich Low_complexity Low_complexity 1 32 0 5 1221 214 280 0 0 chr13 83372249 83372299 -36912013 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 5 1221 347 263 51 31 chr13 83372411 83372509 -36911803 - PB1D10 SINE Alu 0 117 18 5 1221 1498 77 66 9 chr13 83372513 83372724 -36911588 + L1Md_F2 LINE L1 6347 6569 -13 5 1221 261 0 0 0 chr13 83372777 83372806 -36911506 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1221 414 0 0 0 chr13 83373087 83373133 -36911179 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1221 468 0 0 0 chr13 83373133 83373184 -36911128 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 1221 465 165 9 149 chr13 83374043 83374157 -36910155 + L1VL4 LINE L1 1 98 -6204 5 1221 3075 101 18 0 chr13 83374156 83374610 -36909702 + MusHAL1 LINE L1 2033 2494 -218 5 1221 423 0 0 0 chr13 83374611 83374658 -36909654 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 5 1221 3030 72 27 5 chr13 83374661 83375067 -36909245 - L1Md_F2 LINE L1 -19 6563 6149 5 1221 187 54 54 0 chr13 83375092 83375129 -36909183 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1221 7616 87 19 8 chr13 83375132 83376955 -36907357 + L1_Mus2 LINE L1 4735 6565 -1 5 1221 203 139 0 44 chr13 83378068 83378113 -36906199 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 5 1221 558 0 0 0 chr13 83379170 83379232 -36905080 + (TC)n Simple_repeat Simple_repeat 1 62 0 5 1221 1218 224 72 33 chr13 83380317 83380677 -36903635 - ORR1D1 LTR MaLR 0 374 1 5 1221 474 244 103 65 chr13 83380813 83380997 -36903315 + B3A SINE B2 5 195 -3 5 1221 231 214 0 0 chr13 83381269 83381311 -36903001 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 5 1221 254 87 0 21 chr13 83382900 83382947 -36901365 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1221 22 0 0 0 chr13 83383154 83383176 -36901136 + AT_rich Low_complexity Low_complexity 1 22 0 5 1221 4136 67 91 16 chr13 83383483 83384057 -36900255 - L1_Mus2 LINE L1 -2 6564 5948 5 1221 3345 91 1 5 chr13 83384057 83384616 -36899696 + L1_Mus2 LINE L1 5400 5958 -608 5 1221 797 141 13 0 chr13 83385597 83385753 -36898559 - L1_Mus4 LINE L1 -1 6635 6478 5 1221 234 266 38 0 chr13 83385799 83385878 -36898434 - Lx8 LINE L1 -1582 5891 5810 5 1221 384 383 48 32 chr13 83386121 83386369 -36897943 + B4A SINE B4 40 291 -1 5 1221 279 231 15 0 chr13 83386382 83386447 -36897865 + (CA)n Simple_repeat Simple_repeat 1 66 0 5 1221 376 261 168 14 chr13 83386638 83386945 -36897367 + L1M4 LINE L1 5022 5398 -748 5 1221 25 31 0 0 chr13 83388594 83388626 -36895686 + AT_rich Low_complexity Low_complexity 1 32 0 5 1221 485 91 39 0 chr13 83388678 83388755 -36895557 + (TTTC)n Simple_repeat Simple_repeat 4 83 0 5 1221 774 176 6 17 chr13 83388755 83388934 -36895378 + CT-rich Low_complexity Low_complexity 1 177 0 5 1221 205 261 0 0 chr13 83389486 83389532 -36894780 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1221 455 307 13 60 chr13 83390474 83390623 -36893689 + Tigger7 DNA MER2_type 1 142 -2349 5 1221 1528 124 4 0 chr13 83390625 83390874 -36893438 - MusHAL1 LINE L1 -425 2287 2038 5 1221 581 266 40 105 chr13 83390874 83391135 -36893177 + ORR1A3-int LTR MaLR 883 1269 -694 5 1221 362 183 42 0 chr13 83391135 83391206 -36893106 + MTD-int LTR MaLR 1185 1258 0 5 1221 564 292 183 86 chr13 83391206 83391588 -36892724 + MTD LTR MaLR 1 419 0 5 1221 575 344 54 9 chr13 83391593 83391816 -36892496 + Tigger7 DNA MER2_type 236 468 -2023 5 1221 381 211 10 31 chr13 83391812 83391910 -36892402 + Tigger7 DNA MER2_type 2322 2417 -74 5 1221 336 322 40 40 chr13 83392595 83392721 -36891591 - MTEa LTR MaLR -253 126 1 5 1221 256 320 95 19 chr13 83395633 83395738 -36888574 + B4A SINE B4 68 180 -112 5 1221 37611 37 0 6 chr13 83395764 83400083 -36884229 - L1Md_T LINE L1 0 6585 2301 5 1221 1044 35 20 40 chr13 83400083 83400232 -36884080 - B1_Mus2 SINE Alu 0 147 2 5 1221 37611 48 1 13 chr13 83400232 83402197 -36882115 - L1Md_T LINE L1 -3586 2300 256 5 1221 216 0 0 0 chr13 83402683 83402707 -36881605 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1221 230 350 44 128 chr13 83403288 83403468 -36880844 + B4A SINE B4 53 217 -75 5 1221 492 252 21 49 chr13 83403338 83403480 -36880832 + B1_Mur2 SINE Alu 12 149 0 5 1221 1680 180 40 3 chr13 83404113 83404414 -36879898 + Lx4A LINE L1 6747 7058 0 5 1221 447 52 0 0 chr13 83404504 83404562 -36879750 + (TG)n Simple_repeat Simple_repeat 1 58 0 5 1221 207 0 0 0 chr13 83404562 83404584 -36879728 + (GA)n Simple_repeat Simple_repeat 1 23 0 5 1221 435 92 0 0 chr13 83404697 83404762 -36879550 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1221 645 174 0 0 chr13 83407442 83407603 -36876709 + GA-rich Low_complexity Low_complexity 2 162 0 5 1221 23 0 0 0 chr13 83408858 83408881 -36875431 + AT_rich Low_complexity Low_complexity 1 23 0 5 1221 232 27 0 51 chr13 83409098 83409137 -36875175 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 5 1221 454 202 200 57 chr13 83409437 83409647 -36874665 - Lx9 LINE L1 -9 7635 7396 5 1221 1296 70 0 0 chr13 83409886 83410058 -36874254 + (GAAA)n Simple_repeat Simple_repeat 4 175 0 5 1221 288 38 36 36 chr13 83410597 83410652 -36873660 + (TTAA)n Simple_repeat Simple_repeat 4 58 0 5 1221 32 0 0 0 chr13 83410714 83410746 -36873566 + AT_rich Low_complexity Low_complexity 1 32 0 5 1221 23 0 0 0 chr13 83411688 83411711 -36872601 + AT_rich Low_complexity Low_complexity 1 23 0 5 1221 1352 304 48 14 chr13 83411754 83412257 -36872055 + Lx8 LINE L1 6675 7194 -279 5 1221 2897 103 27 0 chr13 83412693 83413191 -36871121 - Lx3B LINE L1 -993 5980 5473 5 1221 5777 135 30 10 chr13 83413191 83414174 -36870138 + Lx3C LINE L1 5973 6974 -2 5 1221 1205 221 51 89 chr13 83416703 83417075 -36867237 - Lx6 LINE L1 -13 7447 7090 5 1221 459 90 0 0 chr13 83418000 83418017 -36866295 + (TTCC)n Simple_repeat Simple_repeat 2 18 0 5 1221 1051 84 5 38 chr13 83418017 83418203 -36866109 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 5 1221 459 90 0 0 chr13 83418203 83418252 -36866060 + (TTCC)n Simple_repeat Simple_repeat 1 49 0 5 1221 699 116 0 0 chr13 83418242 83418354 -36865958 + (TC)n Simple_repeat Simple_repeat 2 113 0 5 1221 36 82 0 0 chr13 83418935 83419020 -36865292 + AT_rich Low_complexity Low_complexity 1 85 0 5 1221 326 233 0 10 chr13 83419231 83419335 -36864977 - L1MA5 LINE L1 -114 6186 6084 5 1221 319 230 9 9 chr13 83419494 83419608 -36864704 + GA-rich Low_complexity Low_complexity 4 117 0 5 1221 498 238 98 82 chr13 83420344 83420527 -36863785 - B3 SINE B2 -8 187 2 5 1221 311 190 129 55 chr13 83421236 83421346 -36862966 - Lx8 LINE L1 -1584 5889 5769 5 1221 3088 59 5 10 chr13 83422002 83422412 -36861900 - L1Md_F2 LINE L1 -12 6570 6163 5 1221 558 254 201 16 chr13 83422432 83422676 -36861636 + B4 SINE B4 4 292 0 5 1221 286 365 84 0 chr13 83422815 83422922 -36861390 - PB1D10 SINE Alu -1 116 1 5 1221 231 216 20 0 chr13 83422958 83423009 -36861303 + GA-rich Low_complexity Low_complexity 4 55 0 5 1221 312 27 0 0 chr13 83423489 83423526 -36860786 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1221 23 33 0 0 chr13 83423598 83423628 -36860684 + AT_rich Low_complexity Low_complexity 1 30 0 5 1221 3188 68 14 2 chr13 83423673 83424089 -36860223 - BGLII LTR ERVK 0 421 1 5 1221 21 36 0 0 chr13 83424655 83424683 -36859629 + AT_rich Low_complexity Low_complexity 1 28 0 5 1221 284 102 0 20 chr13 83424917 83424967 -36859345 + (TTC)n Simple_repeat Simple_repeat 1 49 0 5 1221 483 306 119 5 chr13 83425450 83425644 -36858668 + ID_B1 SINE B4 1 216 -8 5 1221 402 134 0 0 chr13 83425644 83425711 -36858601 + (GGA)n Simple_repeat Simple_repeat 2 68 0 5 1221 354 98 0 0 chr13 83425886 83425937 -36858375 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 5 1221 439 320 64 19 chr13 83425944 83426100 -36858212 - RSINE1 SINE B4 0 165 3 5 1221 236 160 40 0 chr13 83427423 83427473 -36856839 + Lx9 LINE L1 7414 7465 -179 5 1221 252 0 0 0 chr13 83427476 83427504 -36856808 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1221 340 273 7 73 chr13 83427559 83427709 -36856603 + L1VL4 LINE L1 148 287 -6015 5 1221 730 79 0 19 chr13 83427731 83427834 -36856478 + B1_Mus2 SINE Alu 47 147 0 5 1221 7807 102 5 1 chr13 83427846 83429378 -36854934 + L1_Mus3 LINE L1 5099 6637 -1 5 1221 215 229 62 10 chr13 83429390 83429487 -36854825 + (AAATG)n Simple_repeat Simple_repeat 5 106 0 5 1221 252 324 135 27 chr13 83430243 83430465 -36853847 + ERVL-int LTR ERVL 4487 4732 -1029 5 1221 268 325 13 0 chr13 83430503 83430580 -36853732 + ERVL-int LTR ERVL 4685 4762 -952 5 1221 1044 270 112 43 chr13 83430607 83431114 -36853198 + ERVL-int LTR ERVL 4875 5416 -341 5 1221 727 133 0 55 chr13 83431114 83431241 -36853071 - B1_Mus1 SINE Alu -27 121 2 5 1221 310 268 0 0 chr13 83431281 83431363 -36852949 + ERVL-int LTR ERVL 5598 5679 -35 5 1221 343 292 14 20 chr13 83432763 83432910 -36851402 - Lx8 LINE L1 -1198 6275 6130 5 1221 8861 9 0 0 chr13 83432912 83434313 -36849999 - L1Md_A LINE L1 0 6582 5182 5 1221 270 297 33 0 chr13 83434310 83434401 -36849911 + Lx9 LINE L1 7363 7456 -188 5 1221 387 0 0 0 chr13 83434402 83434445 -36849867 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1221 415 250 133 31 chr13 83434446 83434574 -36849738 + RSINE1 SINE B4 25 165 0 5 1221 435 260 137 8 chr13 83434618 83434742 -36849570 + B1_Mur2 SINE Alu 2 141 -8 5 1221 222 62 0 0 chr13 83436184 83436216 -36848096 + (TTAA)n Simple_repeat Simple_repeat 4 35 0 5 1221 303 146 0 0 chr13 83437715 83437770 -36846542 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1221 258 32 0 0 chr13 83438245 83438276 -36846036 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 5 1221 714 341 122 93 chr13 83438338 83439039 -36845273 + MLT1H2-int LTR MaLR 32 768 -641 5 1221 2135 100 12 32 chr13 83439039 83439379 -36844933 - L1_Mus3 LINE L1 -6 6632 6300 5 1221 714 341 122 93 chr13 83439379 83439760 -36844552 + MLT1H2-int LTR MaLR 769 1145 -264 5 1221 195 42 0 0 chr13 83439766 83439790 -36844522 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1221 337 409 66 14 chr13 83440384 83440595 -36843717 + MLT1H2 LTR MaLR 267 488 -1 5 1221 1634 196 65 31 chr13 83440738 83441091 -36843221 + ORR1B2 LTR MaLR 2 366 -1 6 1221 233 351 53 18 chr13 83441128 83441241 -36843071 - MTEb LTR MaLR -5 374 258 6 1221 404 51 17 0 chr13 83441943 83442002 -36842310 + (TA)n Simple_repeat Simple_repeat 2 61 0 6 1221 342 0 0 0 chr13 83442233 83442271 -36842041 + (TGGA)n Simple_repeat Simple_repeat 4 41 0 6 1221 405 0 0 0 chr13 83442278 83442323 -36841989 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1221 584 261 23 0 chr13 83442368 83442498 -36841814 - B3A SINE B2 -64 134 2 6 1221 255 286 101 10 chr13 83442498 83442594 -36841718 + MLT1B LTR MaLR 286 390 0 6 1221 207 132 44 0 chr13 83442867 83442935 -36841377 + T-rich Low_complexity Low_complexity 3 73 0 6 1221 982 127 159 0 chr13 83444646 83444835 -36839477 + URR1A DNA MER1_type 1 219 -7 6 1221 258 141 35 12 chr13 83445496 83445582 -36838730 + (TTTG)n Simple_repeat Simple_repeat 2 89 0 6 1221 290 236 64 28 chr13 83446150 83446259 -36838053 + MER5A DNA MER1_type 8 120 -69 6 1221 212 184 0 0 chr13 83446655 83446693 -36837619 + A-rich Low_complexity Low_complexity 1 38 0 6 1221 423 0 0 0 chr13 83450793 83450840 -36833472 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1221 31 26 0 0 chr13 83451956 83451994 -36832318 + AT_rich Low_complexity Low_complexity 1 38 0 6 1221 2445 128 62 7 chr13 83452269 83452687 -36831625 - BGLII_B LTR ERVK 0 441 1 6 1221 318 298 31 12 chr13 83453748 83453908 -36830404 - L1ME3B LINE L1 -352 5888 5726 6 1221 564 361 56 19 chr13 83454003 83454271 -36830041 - B4A SINE B4 -4 288 11 6 1221 47 19 0 0 chr13 83454465 83454519 -36829793 + AT_rich Low_complexity Low_complexity 1 54 0 6 1221 244 339 0 0 chr13 83454531 83454643 -36829669 - Lx7 LINE L1 -26 7670 7559 6 1221 269 70 47 0 chr13 83454698 83454741 -36829571 + (CCCCCA)n Simple_repeat Simple_repeat 2 46 0 6 1221 1865 273 47 35 chr13 83454741 83455315 -36828997 - Lx7 LINE L1 -253 7443 6863 6 1221 400 290 68 13 chr13 83455601 83455887 -36828425 - L1MA4 LINE L1 -276 6024 5658 6 1221 23 68 0 0 chr13 83456020 83456064 -36828248 + AT_rich Low_complexity Low_complexity 1 44 0 6 1221 342 0 0 0 chr13 83456080 83456118 -36828194 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1221 566 301 7 27 chr13 83456122 83456272 -36828040 - RSINE1 SINE B4 0 165 19 6 1221 474 101 0 0 chr13 83456485 83456554 -36827758 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 6 1221 302 349 165 15 chr13 83456730 83457003 -36827309 + L1M5 LINE L1 4028 4341 -1805 6 1221 9034 88 40 67 chr13 83457044 83457667 -36826645 - Lx3_Mus LINE L1 -8 7001 6355 6 1221 3207 46 21 0 chr13 83457667 83458055 -36826257 - MTA_Mm LTR MaLR 0 396 1 6 1221 9034 88 40 67 chr13 83458055 83458473 -36825839 - Lx3_Mus LINE L1 -655 6354 5923 6 1221 978 132 0 0 chr13 83458473 83458632 -36825680 + (TTTC)n Simple_repeat Simple_repeat 1 159 0 6 1221 9034 81 14 16 chr13 83458632 83459316 -36824996 - Lx3_Mus LINE L1 -1087 5922 5317 6 1221 601 63 0 0 chr13 83459311 83459390 -36824922 - Lx3_Mus LINE L1 -963 4923 4845 6 1221 405 336 40 14 chr13 83459446 83459594 -36824718 + B4A SINE B4 14 165 -127 6 1221 1210 314 115 14 chr13 83460447 83460627 -36823685 - Charlie1a DNA MER1_type -478 977 800 6 1221 378 0 0 0 chr13 83460627 83460669 -36823643 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1221 1210 314 115 14 chr13 83460669 83461156 -36823156 - Charlie1a DNA MER1_type -656 799 243 6 1221 259 189 65 22 chr13 83461671 83461704 -36822608 + (TAGA)n Simple_repeat Simple_repeat 3 37 0 6 1221 416 19 19 0 chr13 83461704 83461757 -36822555 + (CAGA)n Simple_repeat Simple_repeat 3 56 0 6 1221 259 189 65 22 chr13 83461757 83461815 -36822497 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 6 1221 372 100 0 0 chr13 83461958 83462008 -36822304 + Lx4A LINE L1 5827 5876 -1182 6 1221 2690 166 46 90 chr13 83462018 83462582 -36821730 + Lx4A LINE L1 6520 7058 0 6 1221 24 0 0 0 chr13 83462582 83462606 -36821706 + AT_rich Low_complexity Low_complexity 1 24 0 6 1221 5638 85 28 6 chr13 83462897 83463688 -36820624 + RLTR13C2 LTR ERVK 1 808 0 6 1221 278 183 55 1 chr13 83464993 83465141 -36819171 + RMER17A LTR ERVK 340 544 -345 6 1221 395 324 112 54 chr13 83465725 83466038 -36818274 - MLT1J2 LTR MaLR -29 419 89 6 1221 528 246 26 17 chr13 83466222 83466338 -36817974 + B1_Mm SINE Alu 19 135 -12 6 1221 3049 208 54 0 chr13 83466350 83466965 -36817347 - Lx5 LINE L1 0 7050 6403 6 1221 453 19 0 0 chr13 83467359 83467413 -36816899 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1221 470 276 39 23 chr13 83468878 83469008 -36815304 + B1F SINE Alu 17 148 -1 6 1221 579 15 0 0 chr13 83472377 83472445 -36811867 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 1221 21 0 0 0 chr13 83474009 83474030 -36810282 + AT_rich Low_complexity Low_complexity 1 21 0 6 1221 363 322 87 63 chr13 83474066 83474192 -36810120 + RSINE1 SINE B4 8 136 -29 6 1221 857 216 114 3 chr13 83474641 83474938 -36809374 - Lx7 LINE L1 0 7696 7367 6 1221 257 339 50 71 chr13 83475003 83475074 -36809238 - RLTR20A LTR ERVK -12 529 459 6 1221 3458 86 12 29 chr13 83475074 83475592 -36808720 + L1_Mus2 LINE L1 6058 6566 0 6 1221 257 339 50 71 chr13 83475592 83475660 -36808652 - RLTR20A LTR ERVK -83 458 393 6 1221 685 149 55 63 chr13 83475660 83475809 -36808503 - Lx LINE L1 -8 6646 6490 6 1221 358 61 0 0 chr13 83475812 83475861 -36808451 + Lx LINE L1 6268 6316 -338 6 1221 301 257 111 28 chr13 83475895 83476039 -36808273 - Lx7 LINE L1 -1619 6077 5922 6 1221 1562 49 20 0 chr13 83476406 83476609 -36807703 - L1Md_F2 LINE L1 -1 6581 6375 6 1221 318 50 0 0 chr13 83477910 83477950 -36806362 + (TA)n Simple_repeat Simple_repeat 2 41 0 6 1221 1680 138 36 13 chr13 83477967 83478320 -36805992 + L1_Mus2 LINE L1 6259 6566 0 6 1221 708 54 0 0 chr13 83478339 83478432 -36805880 + B1_Mus2 SINE Alu 41 133 -14 6 1221 849 127 0 0 chr13 83478450 83478584 -36805728 + (GAAA)n Simple_repeat Simple_repeat 2 135 0 6 1221 255 250 32 40 chr13 83478628 83478753 -36805559 + L1M4 LINE L1 3237 3360 -2786 6 1221 3846 154 64 7 chr13 83478764 83478776 -36805536 + Lx4B LINE L1 6328 6340 -718 6 1221 258 32 0 0 chr13 83478776 83478807 -36805505 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1221 3846 154 64 7 chr13 83478807 83479482 -36804830 + Lx4B LINE L1 6341 7054 -4 6 1221 29 0 0 0 chr13 83480391 83480420 -36803892 + AT_rich Low_complexity Low_complexity 1 29 0 6 1221 275 0 29 0 chr13 83484686 83484721 -36799591 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 6 1221 312 188 0 0 chr13 83485027 83485091 -36799221 + A-rich Low_complexity Low_complexity 1 64 0 6 1221 22 0 0 0 chr13 83485480 83485502 -36798810 + AT_rich Low_complexity Low_complexity 1 22 0 6 1221 25 0 0 0 chr13 83487465 83487490 -36796822 + AT_rich Low_complexity Low_complexity 1 25 0 6 1221 470 17 17 0 chr13 83488114 83488173 -36796139 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 6 1221 302 42 0 41 chr13 83490030 83490079 -36794233 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 6 1221 450 0 0 0 chr13 83490079 83490129 -36794183 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1221 183 80 0 0 chr13 83490166 83490191 -36794121 + (TCTCC)n Simple_repeat Simple_repeat 2 26 0 6 1221 715 291 71 36 chr13 83491008 83491372 -36792940 - MTEa LTR MaLR 0 379 3 6 1221 27 29 0 0 chr13 83491847 83491881 -36792431 + AT_rich Low_complexity Low_complexity 1 34 0 6 1222 25 51 0 0 chr13 83493083 83493122 -36791190 + AT_rich Low_complexity Low_complexity 1 39 0 6 1222 226 368 0 0 chr13 83493967 83494035 -36790277 + MIR SINE MIR 36 103 -105 6 1222 208 269 6 17 chr13 83494425 83494491 -36789821 - MIRb SINE MIR -6 256 189 6 1222 277 125 0 35 chr13 83495227 83495285 -36789027 + (TTG)n Simple_repeat Simple_repeat 2 57 0 6 1222 368 16 45 30 chr13 83495334 83495400 -36788912 + (CAAAAA)n Simple_repeat Simple_repeat 6 72 0 6 1222 186 267 154 57 chr13 83496335 83496458 -36787854 + MIR SINE MIR 81 215 -47 6 1222 1335 290 37 37 chr13 83496500 83496965 -36787347 - Lx7 LINE L1 -501 7195 6731 6 1222 468 238 164 0 chr13 83497052 83497174 -36787138 + B1_Mur2 SINE Alu 2 143 -6 6 1222 432 0 0 0 chr13 83497216 83497264 -36787048 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1222 263 346 149 7 chr13 83498323 83498477 -36785835 + B4A SINE B4 112 287 -5 6 1222 516 158 0 0 chr13 83498513 83498627 -36785685 + (CA)n Simple_repeat Simple_repeat 2 115 0 6 1222 854 194 91 35 chr13 83498813 83499043 -36785269 - Lx9 LINE L1 -7 7637 7395 6 1222 204 179 0 0 chr13 83500167 83500206 -36784106 + GA-rich Low_complexity Low_complexity 1 39 0 1 1222 399 21 0 0 chr13 83500245 83500293 -36784019 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1222 240 222 0 0 chr13 83500561 83500624 -36783688 + Lx6 LINE L1 7371 7433 -27 3 1222 502 344 13 7 chr13 83500985 83501137 -36783175 + B3A SINE B2 2 154 -44 4 1222 417 129 0 0 chr13 83501137 83501207 -36783105 + (CA)n Simple_repeat Simple_repeat 1 70 0 5 1222 341 289 37 6 chr13 83501979 83502083 -36782229 - MLT1A LTR MaLR -2 388 268 6 1222 254 320 78 47 chr13 83502197 83502325 -36781987 + B4A SINE B4 155 286 -6 7 1222 229 310 45 37 chr13 83502465 83502599 -36781713 - MamRep605 Unknown Unknown -725 151 17 8 1222 2356 204 30 26 chr13 83502971 83503465 -36780847 - Lx6 LINE L1 0 7050 6555 9 1222 2928 203 70 8 chr13 83503460 83504121 -36780191 + Lx5 LINE L1 5877 6904 -792 1 1222 315 0 0 0 chr13 83506049 83506084 -36778228 + (TAA)n Simple_repeat Simple_repeat 1 35 0 1 1222 3725 213 107 22 chr13 83506934 83508235 -36776077 - Lx6 LINE L1 -1091 6369 4985 9 1222 568 293 187 8 chr13 83508531 83508920 -36775392 - L3 LINE CR1 -1 4488 4129 1 1222 265 236 40 79 chr13 83509102 83509203 -36775109 - LTR33A_ LTR ERVL 0 531 435 1 1222 6056 189 17 10 chr13 83509426 83510609 -36773703 - Lx2B LINE L1 -2 6998 5808 1 1222 198 0 0 0 chr13 83510989 83511011 -36773301 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1222 198 103 0 0 chr13 83511507 83511536 -36772776 + (TA)n Simple_repeat Simple_repeat 2 30 0 1 1222 236 30 30 0 chr13 83513182 83513215 -36771097 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1 1222 29 0 0 0 chr13 83513505 83513534 -36770778 + AT_rich Low_complexity Low_complexity 1 29 0 1 1222 359 345 81 5 chr13 83514248 83514446 -36769866 - MER5C1 DNA MER1_type -48 215 3 1 1222 301 274 24 0 chr13 83516233 83516317 -36767995 + (CATA)n Simple_repeat Simple_repeat 2 87 0 2 1222 180 0 0 0 chr13 83516845 83516865 -36767447 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1222 306 67 0 0 chr13 83518059 83518104 -36766208 + (A)n Simple_repeat Simple_repeat 1 45 0 2 1222 407 152 21 32 chr13 83519860 83519955 -36764357 + Lx LINE L1 6555 6648 -6 2 1222 1072 109 11 0 chr13 83520275 83520450 -36763862 + (GGAGAA)n Simple_repeat Simple_repeat 3 179 0 2 1222 21 0 0 0 chr13 83522714 83522735 -36761577 + AT_rich Low_complexity Low_complexity 1 21 0 2 1222 405 0 0 0 chr13 83523120 83523165 -36761147 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 1222 243 0 0 0 chr13 83523165 83523191 -36761121 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1222 552 127 0 0 chr13 83523368 83523478 -36760834 + (GA)n Simple_repeat Simple_repeat 2 111 0 2 1222 369 0 0 0 chr13 83524404 83524445 -36759867 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1222 420 20 0 0 chr13 83524445 83524493 -36759819 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1222 1311 212 55 75 chr13 83524493 83524898 -36759414 - MT2A LTR ERVL -65 536 10 3 1222 40 87 0 0 chr13 83524920 83525023 -36759289 + AT_rich Low_complexity Low_complexity 1 103 0 3 1222 1392 44 0 6 chr13 83525221 83525403 -36758909 - L1_Mus2 LINE L1 0 6566 6386 3 1222 1704 94 0 0 chr13 83525403 83525627 -36758685 + L1_Mus2 LINE L1 6030 6253 -313 3 1222 4003 129 55 22 chr13 83526000 83526723 -36757589 - RMER6A LTR ERVK -9 747 1 3 1222 1122 102 43 38 chr13 83527905 83528089 -36756223 + B2_Mm1t SINE B2 2 186 -7 3 1222 23 33 0 0 chr13 83528527 83528557 -36755755 + AT_rich Low_complexity Low_complexity 1 30 0 3 1222 21 0 0 0 chr13 83529183 83529204 -36755108 + AT_rich Low_complexity Low_complexity 1 21 0 3 1222 621 105 0 9 chr13 83529477 83529583 -36754729 - Lx LINE L1 -6 6648 6544 3 1222 4692 125 55 18 chr13 83529584 83530256 -36754056 + Lx LINE L1 5847 6518 -136 3 1222 180 0 0 0 chr13 83530256 83530276 -36754036 + (TGGG)n Simple_repeat Simple_repeat 2 21 0 4 1222 4692 125 55 18 chr13 83530276 83530362 -36753950 + Lx LINE L1 6519 6631 -23 3 1222 1384 119 0 0 chr13 83530353 83530554 -36753758 + Lx LINE L1 5860 6060 -594 4 1222 3074 66 5 2 chr13 83531297 83531692 -36752620 + MTA_Mm LTR MaLR 1 396 0 4 1222 810 223 7 0 chr13 83532132 83532280 -36752032 + B1_Mur2 SINE Alu 1 149 0 4 1222 225 0 0 0 chr13 83532283 83532308 -36752004 + (GAAA)n Simple_repeat Simple_repeat 4 28 0 4 1222 657 96 0 0 chr13 83532308 83532402 -36751910 + (GGGA)n Simple_repeat Simple_repeat 3 96 0 4 1222 602 158 42 18 chr13 83532377 83532473 -36751839 + polypurine Low_complexity Low_complexity 3 100 0 4 1222 1312 41 0 12 chr13 83532473 83532646 -36751666 + (GGGAA)n Simple_repeat Simple_repeat 4 174 0 4 1222 602 158 42 18 chr13 83532646 83532717 -36751595 + polypurine Low_complexity Low_complexity 101 174 0 4 1222 387 0 0 0 chr13 83532892 83532935 -36751377 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1222 674 288 236 53 chr13 83533279 83533829 -36750483 - MLT1E LTR MaLR 0 653 3 5 1222 360 0 0 0 chr13 83534170 83534210 -36750102 + (TA)n Simple_repeat Simple_repeat 1 40 0 5 1222 283 0 23 45 chr13 83535624 83535668 -36748644 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 5 1222 2030 193 35 2 chr13 83536290 83536684 -36747628 + MTB_Mm LTR MaLR 1 407 0 5 1222 357 47 0 45 chr13 83536895 83536962 -36747350 + (TG)n Simple_repeat Simple_repeat 1 64 0 5 1222 213 274 20 0 chr13 83537227 83537278 -36747034 - MIR SINE MIR -93 115 64 5 1222 267 350 124 0 chr13 83537550 83537647 -36746665 - PB1D7 SINE Alu -9 111 3 5 1222 404 67 17 0 chr13 83538286 83538346 -36745966 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 5 1222 440 268 46 0 chr13 83538834 83538967 -36745345 - B1_Mur1 SINE Alu -6 143 3 5 1222 7837 67 23 0 chr13 83540016 83541566 -36742746 + L1_Mus1 LINE L1 4992 6567 0 5 1222 210 71 0 0 chr13 83542916 83542944 -36741368 + (CTTTG)n Simple_repeat Simple_repeat 1 28 0 6 1222 985 52 15 0 chr13 83542956 83543092 -36741220 + (GTTTG)n Simple_repeat Simple_repeat 2 139 0 6 1222 231 274 82 0 chr13 83543375 83543448 -36740864 - ID4_ SINE ID -1 82 4 6 1222 417 55 13 27 chr13 83543506 83543581 -36740731 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 1222 454 254 50 65 chr13 83544908 83545047 -36739265 + B1F SINE Alu 12 148 -1 6 1222 862 294 33 43 chr13 83545752 83546054 -36738258 - MTE2b LTR MaLR -11 368 70 6 1222 480 288 60 8 chr13 83546226 83546359 -36737953 + B1_Mur4 SINE Alu 3 142 -8 6 1222 384 22 0 0 chr13 83546360 83546405 -36737907 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1222 459 0 0 0 chr13 83546405 83546455 -36737857 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1222 1035 87 6 12 chr13 83546482 83546645 -36737667 + (GAA)n Simple_repeat Simple_repeat 2 163 0 6 1222 3075 231 55 29 chr13 83547337 83548169 -36736143 + Lx9 LINE L1 6788 7641 -3 7 1222 180 97 0 0 chr13 83548259 83548290 -36736022 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1222 225 0 0 0 chr13 83548348 83548373 -36735939 + (A)n Simple_repeat Simple_repeat 1 25 0 7 1222 258 106 0 0 chr13 83548456 83548503 -36735809 + (CATA)n Simple_repeat Simple_repeat 2 48 0 7 1222 294 266 100 11 chr13 83551418 83551608 -36732704 - Lx7 LINE L1 -240 7456 7250 7 1222 385 297 25 0 chr13 83551648 83551766 -36732546 - ORR1D2 LTR MaLR -51 319 199 7 1222 1491 214 149 9 chr13 83551784 83552208 -36732104 - Lx9 LINE L1 -1 7643 7161 7 1222 1210 261 52 34 chr13 83552208 83552707 -36731605 - L1_Rod LINE L1 -2435 3412 2905 7 1222 791 280 5 0 chr13 83552791 83552977 -36731335 - Lx7 LINE L1 -390 7306 7120 7 1222 1619 226 60 18 chr13 83552985 83553386 -36730926 - Lx6 LINE L1 -461 6999 6582 7 1222 4823 215 101 18 chr13 83553392 83553639 -36730673 - L1_Rod LINE L1 -3072 2775 2455 7 1222 180 0 0 0 chr13 83553639 83553659 -36730653 + (TA)n Simple_repeat Simple_repeat 1 20 0 7 1222 4823 222 83 15 chr13 83553659 83555207 -36729105 - L1_Rod LINE L1 -3393 2454 856 7 1222 209 224 0 20 chr13 83555905 83555955 -36728357 + CT-rich Low_complexity Low_complexity 1 49 0 8 1222 422 143 13 0 chr13 83556068 83556145 -36728167 + GA-rich Low_complexity Low_complexity 2 79 0 8 1222 570 246 82 30 chr13 83556454 83556588 -36727724 - B3 SINE B2 -55 161 21 8 1222 515 319 23 35 chr13 83557037 83557229 -36727083 - MLT1B LTR MaLR -4 370 189 8 1222 428 362 22 33 chr13 83557267 83557447 -36726865 - MLT1B LTR MaLR -182 192 15 8 1222 30 27 0 0 chr13 83557788 83557825 -36726487 + AT_rich Low_complexity Low_complexity 1 37 0 8 1222 599 248 44 0 chr13 83557859 83557996 -36726316 + B3A SINE B2 1 143 -55 8 1222 3164 22 0 8 chr13 83558008 83558378 -36725934 + IAPLTR1_Mm LTR ERVK 1 367 0 8 1222 53449 21 14 1 chr13 83558378 83564765 -36719547 + IAPEz-int LTR ERVK 8 6481 0 8 1222 3118 25 0 11 chr13 83564765 83565136 -36719176 + IAPLTR1_Mm LTR ERVK 1 367 0 8 1222 305 191 0 0 chr13 83565146 83565209 -36719103 + B3 SINE B2 154 216 0 8 1222 336 299 101 7 chr13 83565877 83566015 -36718297 - HAL1-3A_ME LINE L1 -422 2436 2286 8 1222 242 56 0 27 chr13 83566015 83566052 -36718260 + (TCC)n Simple_repeat Simple_repeat 1 36 0 8 1222 306 0 0 0 chr13 83566563 83566597 -36717715 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 1222 2435 325 63 10 chr13 83566656 83567812 -36716500 + Lx8 LINE L1 6257 7473 0 9 1222 4748 148 31 0 chr13 83567818 83568556 -36715756 + Lx4A LINE L1 6293 7053 -5 9 1222 21 57 0 0 chr13 83568558 83568593 -36715719 + AT_rich Low_complexity Low_complexity 1 35 0 9 1222 458 330 44 81 chr13 83569561 83569858 -36714454 + B4A SINE B4 3 288 -4 9 1222 251 336 97 7 chr13 83569909 83570053 -36714259 + LTR78 LTR ERV1 991 1147 -157 9 1222 23 54 0 0 chr13 83570324 83570361 -36713951 + AT_rich Low_complexity Low_complexity 1 37 0 9 1222 3672 259 49 24 chr13 83570427 83570768 -36713544 + Lx5 LINE L1 5968 6319 -731 9 1222 263 49 0 24 chr13 83570768 83570810 -36713502 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 9 1222 3672 259 49 24 chr13 83570810 83571518 -36712794 + Lx5 LINE L1 6320 7042 -8 9 1222 542 318 32 19 chr13 83571688 83571845 -36712467 - B4 SINE B4 -50 242 84 9 1222 382 178 314 0 chr13 83571861 83572030 -36712282 - Lx9 LINE L1 -2 7642 7421 9 1222 1506 46 0 25 chr13 83572113 83572315 -36711997 + L1Md_F3 LINE L1 6374 6570 -14 1 1222 324 199 105 13 chr13 83573541 83573694 -36710618 + Lx9 LINE L1 7476 7642 -2 1 1222 216 135 0 0 chr13 83574503 83574540 -36709772 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 1222 612 0 0 0 chr13 83574613 83574681 -36709631 + (TAGA)n Simple_repeat Simple_repeat 4 71 0 1 1222 288 0 0 0 chr13 83574755 83574787 -36709525 + (GTTTG)n Simple_repeat Simple_repeat 2 33 0 1 1222 207 0 0 0 chr13 83574786 83574809 -36709503 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1222 1149 41 0 14 chr13 83574831 83574978 -36709334 - B1_Mus1 SINE Alu 0 148 4 1 1222 818 289 149 25 chr13 83575003 83575068 -36709244 + Lx8 LINE L1 6705 6768 -705 1 1222 669 96 0 25 chr13 83575068 83575186 -36709126 + L1_Mus4 LINE L1 6522 6636 0 1 1222 818 289 149 25 chr13 83575186 83575609 -36708703 + Lx8 LINE L1 6769 7254 -219 1 1222 767 251 124 38 chr13 83576299 83576564 -36707748 - B4A SINE B4 -4 288 1 1 1222 955 224 28 5 chr13 83576594 83576805 -36707507 + B3 SINE B2 1 216 0 1 1222 327 49 0 0 chr13 83580734 83580775 -36703537 + (T)n Simple_repeat Simple_repeat 1 41 0 1 1222 8626 3 0 0 chr13 83580804 83581924 -36702388 - L1Md_A LINE L1 0 6582 5463 1 1222 12488 3 0 0 chr13 83581921 83583390 -36700922 + L1Md_A LINE L1 3994 5462 -421 1 1222 258 32 0 0 chr13 83583643 83583674 -36700638 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1222 937 306 62 35 chr13 83584433 83584839 -36699473 + MTD LTR MaLR 3 419 0 1 1222 245 300 64 43 chr13 83584886 83584980 -36699332 + MIRb SINE MIR 79 174 -94 1 1222 280 298 53 88 chr13 83586101 83586215 -36698097 + Tigger5 DNA MER2_type 2295 2404 -2 1 1222 22 0 0 0 chr13 83588292 83588314 -36695998 + AT_rich Low_complexity Low_complexity 1 22 0 1 1222 22 0 0 0 chr13 83590606 83590628 -36693684 + AT_rich Low_complexity Low_complexity 1 22 0 1 1222 25 0 0 0 chr13 83591827 83591852 -36692460 + AT_rich Low_complexity Low_complexity 1 25 0 1 1222 207 0 0 0 chr13 83592284 83592307 -36692005 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1 1222 1637 58 18 0 chr13 83592307 83592531 -36691781 - Lx3_Mus LINE L1 -9 7000 6773 1 1222 285 353 107 103 chr13 83593742 83594295 -36690017 + LTR81B LTR ERV1? 710 1264 -129 1 1222 675 0 0 0 chr13 83594701 83594776 -36689536 + (GTTTG)n Simple_repeat Simple_repeat 1 75 0 1 1222 387 355 31 55 chr13 83595162 83595451 -36688861 + B4A SINE B4 9 290 -2 1 1222 398 146 12 0 chr13 83595489 83595571 -36688741 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 1222 21 0 0 0 chr13 83596182 83596203 -36688109 + AT_rich Low_complexity Low_complexity 1 21 0 1 1222 338 336 24 19 chr13 83596490 83596699 -36687613 + Lx9 LINE L1 7246 7455 -189 1 1222 312 27 0 0 chr13 83596715 83596752 -36687560 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1222 226 178 22 22 chr13 83597303 83597349 -36686963 + MLT1K LTR MaLR 533 578 -17 1 1222 253 217 9 124 chr13 83598348 83598453 -36685859 - MamGypLTR2b LTR Gypsy -23 899 807 1 1222 1008 68 0 0 chr13 83598528 83598661 -36685651 + (GGGGA)n Simple_repeat Simple_repeat 5 137 0 1 1222 2767 179 30 126 chr13 83598929 83599685 -36684627 - RMER6C LTR ERVK 0 690 7 1 1222 869 236 24 78 chr13 83599686 83599980 -36684332 - Lx6 LINE L1 -76 7384 7107 1 1222 403 182 78 0 chr13 83601136 83601213 -36683099 - HAL1-3A_ME LINE L1 -800 2058 1976 1 1222 680 169 7 0 chr13 83601214 83601368 -36682944 + (TG)n Simple_repeat Simple_repeat 2 156 0 1 1222 258 122 0 93 chr13 83604679 83604733 -36679579 - L2a LINE L2 0 3426 3378 1 1222 248 102 0 20 chr13 83606198 83606248 -36678064 + (TTTTTG)n Simple_repeat Simple_repeat 3 51 0 1 1222 916 130 0 91 chr13 83606732 83606952 -36677360 - Lx LINE L1 0 6654 6455 1 1222 43 35 0 0 chr13 83607573 83607630 -36676682 + AT_rich Low_complexity Low_complexity 1 57 0 1 1222 397 354 12 60 chr13 83608216 83608384 -36675928 - RSINE1 SINE B4 0 165 6 1 1222 558 273 93 15 chr13 83608542 83608874 -36675438 - L1MA6 LINE L1 -142 6158 5782 1 1222 704 253 113 42 chr13 83608885 83609240 -36675072 - L1MA6 LINE L1 -1194 4949 4570 1 1222 588 194 23 23 chr13 83609250 83609382 -36674930 - Lx4B LINE L1 -324 6734 6603 1 1222 1227 170 196 4 chr13 83609376 83609647 -36674665 + Lx4A LINE L1 6723 7045 -13 1 1222 6747 52 6 1 chr13 83609692 83610578 -36673734 - L1Md_F2 LINE L1 0 6582 5693 1 1222 451 308 132 19 chr13 83611080 83611292 -36673020 + RMER15 LTR ERVL 340 575 0 1 1222 369 0 0 0 chr13 83611879 83611920 -36672392 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1 1222 537 274 13 19 chr13 83612050 83612206 -36672106 + RMER15-int LTR ERVL 1598 1752 -3247 1 1222 304 370 13 20 chr13 83612380 83612529 -36671783 + RMER15-int LTR ERVL 1988 2135 -2864 1 1222 2212 286 34 56 chr13 83612737 83613565 -36670747 + RMER15-int LTR ERVL 4161 4970 -29 1 1222 275 219 90 54 chr13 83613570 83613681 -36670631 + RMER15 LTR ERVL 1 115 -460 1 1222 265 345 41 41 chr13 83613748 83613893 -36670419 + RMER15 LTR ERVL 273 417 -158 1 1222 5691 199 88 21 chr13 83616637 83618189 -36666123 - Lx5 LINE L1 -4 7046 5385 1 1222 984 249 66 7 chr13 83621731 83622002 -36662310 - MER33 DNA MER1_type -22 302 16 1 1222 24 0 0 0 chr13 83622562 83622586 -36661726 + AT_rich Low_complexity Low_complexity 1 24 0 1 1222 200 342 27 0 chr13 83622842 83622915 -36661397 + CT-rich Low_complexity Low_complexity 1 75 0 1 1223 2290 177 43 5 chr13 83624515 83624913 -36659399 + MTC LTR MaLR 1 413 -8 1 1223 21 36 0 0 chr13 83625520 83625548 -36658764 + AT_rich Low_complexity Low_complexity 1 28 0 1 1223 10037 124 19 4 chr13 83626766 83628373 -36655939 + L1_Mm LINE L1 3524 5154 -729 1 1223 3231 94 7 2 chr13 83628412 83628868 -36655444 + L1_Mus3 LINE L1 6181 6638 0 1 1223 243 0 0 0 chr13 83628921 83628948 -36655364 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1223 183 42 0 0 chr13 83629078 83629102 -36655210 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1223 626 277 118 14 chr13 83631739 83632028 -36652284 + MER33 DNA MER1_type 1 319 -5 1 1223 457 183 10 0 chr13 83633691 83633795 -36650517 + Lx9 LINE L1 7539 7643 -1 1 1223 23 0 0 0 chr13 83633798 83633821 -36650491 + AT_rich Low_complexity Low_complexity 1 23 0 1 1223 4908 165 11 11 chr13 83633960 83634892 -36649420 + Lx3C LINE L1 1810 2741 -3145 1 1223 5656 168 39 16 chr13 83634887 83636562 -36647750 + Lx3C LINE L1 4835 6559 -417 1 1223 907 196 89 22 chr13 83636620 83636853 -36647459 - Lx3C LINE L1 -5 6971 6767 1 1223 231 208 57 0 chr13 83637030 83637083 -36647229 + MLT1A1 LTR MaLR 353 408 0 1 1223 323 244 117 39 chr13 83637204 83637383 -36646929 - L1MD2 LINE L1 -62 6297 6105 1 1223 516 312 73 54 chr13 83637709 83638132 -36646180 + L1MC5 LINE L1 7501 7931 -30 1 1223 273 349 89 132 chr13 83638625 83638929 -36645383 + B4A SINE B4 2 292 0 1 1223 359 314 25 25 chr13 83639942 83640063 -36644249 - MER3 DNA MER1_type -88 121 1 1 1223 22 70 0 0 chr13 83640877 83640920 -36643392 + AT_rich Low_complexity Low_complexity 1 43 0 1 1223 516 213 0 0 chr13 83641163 83641290 -36643022 + GA-rich Low_complexity Low_complexity 4 130 0 1 1223 316 296 68 68 chr13 83641317 83641480 -36642832 + HAL1-3A_ME LINE L1 2285 2447 -411 1 1223 21 36 0 0 chr13 83646626 83646654 -36637658 + AT_rich Low_complexity Low_complexity 1 28 0 1 1223 383 0 0 21 chr13 83646760 83646808 -36637504 + (TA)n Simple_repeat Simple_repeat 1 47 0 1 1223 530 185 151 14 chr13 83648765 83648984 -36635328 + Lx9 LINE L1 7396 7644 0 1 1223 1080 66 0 0 chr13 83649230 83649367 -36634945 + B1_Mus2 SINE Alu 2 138 -9 1 1223 275 0 29 0 chr13 83649367 83649402 -36634910 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1223 208 286 0 0 chr13 83649468 83649510 -36634802 + polypyrimidine Low_complexity Low_complexity 1 42 0 1 1223 430 192 99 4 chr13 83649515 83649622 -36634690 - B1F SINE Alu 0 120 4 1 1223 416 245 55 28 chr13 83649672 83649781 -36634531 + B1_Mur2 SINE Alu 29 140 -9 1 1223 223 265 14 14 chr13 83650728 83650797 -36633515 + GA-rich Low_complexity Low_complexity 3 71 0 1 1223 200 98 0 68 chr13 83650996 83651040 -36633272 + T-rich Low_complexity Low_complexity 2 42 0 1 1223 339 25 0 0 chr13 83651324 83651364 -36632948 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1223 24 0 0 0 chr13 83652297 83652321 -36631991 + AT_rich Low_complexity Low_complexity 1 24 0 1 1223 191 88 0 29 chr13 83652872 83652907 -36631405 + (CAA)n Simple_repeat Simple_repeat 2 35 0 1 1223 241 372 72 38 chr13 83653112 83653347 -36630965 + MIR SINE MIR 8 250 -12 1 1223 240 59 0 0 chr13 83655704 83655738 -36628574 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 1 1223 325 233 58 0 chr13 83656170 83656256 -36628056 + Charlie5 DNA MER1_type 22 112 -2512 1 1223 468 0 0 0 chr13 83657303 83657355 -36626957 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1223 999 121 0 0 chr13 83658696 83658836 -36625476 - B1_Mus1 SINE Alu -7 141 2 1 1223 21 0 0 0 chr13 83660219 83660240 -36624072 + AT_rich Low_complexity Low_complexity 1 21 0 1 1223 290 214 11 0 chr13 83660287 83660376 -36623936 + GA-rich Low_complexity Low_complexity 2 91 0 1 1223 270 95 0 0 chr13 83660875 83660917 -36623395 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 1 1223 22 35 0 0 chr13 83661400 83661429 -36622883 + AT_rich Low_complexity Low_complexity 1 29 0 1 1223 260 143 0 18 chr13 83663647 83663704 -36620608 + CT-rich Low_complexity Low_complexity 3 58 0 1 1223 210 71 0 0 chr13 83667671 83667699 -36616613 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 1 1223 426 189 0 0 chr13 83668852 83668963 -36615349 + GA-rich Low_complexity Low_complexity 2 112 0 1 1223 216 97 0 0 chr13 83670975 83671006 -36613306 + (GAA)n Simple_repeat Simple_repeat 2 32 0 1 1223 230 229 0 32 chr13 83671384 83671447 -36612865 + Charlie21a DNA MER1_type 914 974 -239 1 1223 23 0 0 0 chr13 83672267 83672290 -36612022 + AT_rich Low_complexity Low_complexity 1 23 0 1 1223 525 32 0 0 chr13 83673377 83673440 -36610872 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 1 1223 459 0 0 0 chr13 83673825 83673876 -36610436 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1223 327 332 108 28 chr13 83674096 83674310 -36610002 + MIRb SINE MIR 21 251 -17 2 1223 183 42 0 0 chr13 83675540 83675564 -36608748 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2 1223 24 32 0 0 chr13 83676629 83676660 -36607652 + AT_rich Low_complexity Low_complexity 1 31 0 2 1223 1247 27 0 0 chr13 83677621 83677767 -36606545 + B1_Mus2 SINE Alu 2 147 0 2 1223 21 0 0 0 chr13 83677769 83677790 -36606522 + AT_rich Low_complexity Low_complexity 1 21 0 2 1223 290 239 135 11 chr13 83678062 83678151 -36606161 + ID_B1 SINE B4 77 176 -48 2 1223 231 208 0 54 chr13 83678157 83678213 -36606099 + G-rich Low_complexity Low_complexity 4 56 0 2 1223 329 274 106 66 chr13 83679514 83679741 -36604571 - MIR SINE MIR -1 261 26 2 1223 25 0 0 0 chr13 83680374 83680399 -36603913 + AT_rich Low_complexity Low_complexity 1 25 0 2 1223 376 313 69 0 chr13 83681464 83681595 -36602717 - MER5B DNA MER1_type -37 141 2 2 1223 21 0 0 0 chr13 83682137 83682158 -36602154 + AT_rich Low_complexity Low_complexity 1 21 0 2 1223 218 200 0 0 chr13 83682194 83682244 -36602068 + A-rich Low_complexity Low_complexity 1 50 0 2 1223 1271 226 71 17 chr13 83682366 83682772 -36601540 - Lx9 LINE L1 -8 7636 7209 2 1223 250 382 28 68 chr13 83683234 83683411 -36600901 - MER5B DNA MER1_type -7 171 2 2 1223 214 26 51 26 chr13 83684173 83684212 -36600100 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1223 22 35 0 0 chr13 83684757 83684786 -36599526 + AT_rich Low_complexity Low_complexity 1 29 0 2 1223 1084 198 19 35 chr13 83685386 83685647 -36598665 - Lx5 LINE L1 -1 7049 6793 2 1223 339 160 0 0 chr13 83688408 83688483 -36595829 + (CATA)n Simple_repeat Simple_repeat 2 76 0 2 1223 21 0 0 0 chr13 83689312 83689333 -36594979 + AT_rich Low_complexity Low_complexity 1 21 0 2 1223 333 0 0 0 chr13 83690389 83690426 -36593886 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1223 485 263 119 0 chr13 83690513 83690631 -36593681 - B3 SINE B2 -84 132 1 2 1223 743 280 83 0 chr13 83691289 83691482 -36592830 - B3 SINE B2 0 216 8 2 1223 254 296 130 51 chr13 83694374 83694557 -36589755 + B4 SINE B4 106 292 0 2 1223 463 282 137 0 chr13 83695381 83695512 -36588800 + B1F2 SINE Alu 1 149 0 2 1223 278 26 26 0 chr13 83697751 83697790 -36586522 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2 1223 339 226 128 11 chr13 83699212 83699306 -36585006 - PB1D10 SINE Alu -10 107 3 2 1223 286 250 111 0 chr13 83699534 83699642 -36584670 + L3b LINE CR1 248 367 -115 2 1223 5141 49 2 2 chr13 83700216 83700848 -36583464 - L1Md_F2 LINE L1 -13 6569 5938 2 1223 422 144 235 82 chr13 83701385 83701483 -36582829 + B1_Mus1 SINE Alu 20 132 -16 2 1223 504 0 0 0 chr13 83701490 83701546 -36582766 + (TA)n Simple_repeat Simple_repeat 2 57 0 2 1223 803 71 11 3 chr13 83703698 83703822 -36580490 + B1_Mm SINE Alu 19 141 -8 2 1223 423 0 0 0 chr13 83704599 83704646 -36579666 + (TC)n Simple_repeat Simple_repeat 2 48 0 2 1223 216 0 0 0 chr13 83707771 83707795 -36576517 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1223 285 283 164 3 chr13 83709454 83709614 -36574698 - L2b LINE L2 -180 3207 3012 2 1223 212 0 36 0 chr13 83712824 83712852 -36571460 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2 1223 245 294 234 35 chr13 83718441 83718512 -36565800 + MIRb SINE MIR 86 163 -105 2 1223 414 0 0 0 chr13 83718512 83718558 -36565754 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1223 245 294 234 35 chr13 83718558 83718627 -36565685 + MIRb SINE MIR 164 254 -14 2 1223 208 330 0 0 chr13 83719463 83719554 -36564758 + (CATATA)n Simple_repeat Simple_repeat 3 93 0 2 1223 25 31 0 0 chr13 83721576 83721608 -36562704 + AT_rich Low_complexity Low_complexity 1 32 0 2 1223 1243 90 0 0 chr13 83722165 83722354 -36561958 + MusHAL1 LINE L1 2514 2702 -10 2 1223 1338 85 0 0 chr13 83722354 83722649 -36561663 + (GAAA)n Simple_repeat Simple_repeat 1 295 0 2 1223 532 246 11 0 chr13 83723956 83724131 -36560181 + GA-rich Low_complexity Low_complexity 2 178 0 2 1223 201 330 57 0 chr13 83725677 83725765 -36558547 - L2c LINE L2 -1 3386 3294 2 1223 242 333 39 0 chr13 83726686 83726788 -36557524 - L3 LINE CR1 -831 3658 3553 2 1223 1215 133 0 27 chr13 83726931 83727117 -36557195 + B2_Mm2 SINE B2 1 181 -14 2 1223 704 107 0 9 chr13 83727247 83727360 -36556952 + (TG)n Simple_repeat Simple_repeat 1 112 0 2 1223 955 262 32 32 chr13 83727379 83727627 -36556685 - B4A SINE B4 -44 248 1 2 1223 181 188 154 15 chr13 83727858 83727923 -36556389 - L3 LINE CR1 -2291 2198 2125 2 1223 223 314 105 0 chr13 83728139 83728225 -36556087 + ID_B1 SINE B4 81 175 -49 2 1223 360 218 126 0 chr13 83728148 83728235 -36556077 + PB1D10 SINE Alu 9 106 -11 2 1223 27 62 0 0 chr13 83730033 83730081 -36554231 + AT_rich Low_complexity Low_complexity 1 48 0 2 1223 354 80 0 0 chr13 83730228 83730278 -36554034 + (CCA)n Simple_repeat Simple_repeat 3 52 0 2 1223 188 35 35 0 chr13 83730817 83730846 -36553466 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 2 1223 639 65 0 0 chr13 83732639 83732732 -36551580 + (TC)n Simple_repeat Simple_repeat 2 94 0 2 1223 432 0 0 0 chr13 83735777 83735825 -36548487 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1223 264 30 0 0 chr13 83735825 83735858 -36548454 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1223 225 295 60 50 chr13 83736365 83736465 -36547847 - L2c LINE L2 -2 3385 3285 2 1223 539 271 7 7 chr13 83736756 83736901 -36547411 - MER3 DNA MER1_type -19 190 46 2 1223 252 0 0 0 chr13 83739008 83739036 -36545276 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1223 555 169 0 0 chr13 83740589 83740737 -36543575 + (TAGA)n Simple_repeat Simple_repeat 3 150 0 2 1223 276 91 0 0 chr13 83740728 83740772 -36543540 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 1223 29 0 0 0 chr13 83740850 83740879 -36543433 + AT_rich Low_complexity Low_complexity 1 29 0 2 1223 406 325 0 31 chr13 83742236 83742363 -36541949 - B3A SINE B2 -75 123 1 2 1223 21 0 0 0 chr13 83742481 83742502 -36541810 + AT_rich Low_complexity Low_complexity 1 21 0 2 1223 852 69 0 0 chr13 83743079 83743195 -36541117 + (TG)n Simple_repeat Simple_repeat 2 117 0 2 1223 315 0 0 0 chr13 83744005 83744040 -36540272 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1223 258 325 122 23 chr13 83745492 83745706 -36538606 + MIR SINE MIR 2 236 -26 2 1223 192 40 0 0 chr13 83746883 83746908 -36537404 + (CA)n Simple_repeat Simple_repeat 2 26 0 2 1223 254 301 0 67 chr13 83749859 83749948 -36534364 - ID4_ SINE ID 0 83 1 2 1223 450 0 0 0 chr13 83750160 83750210 -36534102 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1223 3924 163 28 19 chr13 83753658 83754344 -36529968 - RLTR17 LTR ERVK 0 692 1 2 1224 401 54 18 0 chr13 83756066 83756122 -36528190 + (TTC)n Simple_repeat Simple_repeat 1 57 0 2 1224 196 221 0 25 chr13 83756302 83756317 -36527995 + polypyrimidine Low_complexity Low_complexity 65 79 0 2 1224 1202 100 0 6 chr13 83756317 83756498 -36527814 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 1224 196 221 0 25 chr13 83756498 83756561 -36527751 + CT-rich Low_complexity Low_complexity 3 64 0 2 1224 250 24 71 0 chr13 83757901 83757943 -36526369 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 2 1224 241 277 62 0 chr13 83758514 83758579 -36525733 - B3A SINE B2 -31 167 99 2 1224 891 283 108 11 chr13 83758592 83759007 -36525305 + Lx9 LINE L1 6886 7472 -172 2 1224 330 132 0 0 chr13 83759018 83759071 -36525241 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1224 442 350 8 0 chr13 83761619 83761736 -36522576 + ID_B1 SINE B4 14 131 -93 2 1224 459 0 0 0 chr13 83762529 83762580 -36521732 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1224 689 309 41 45 chr13 83762584 83762828 -36521484 - B4A SINE B4 -15 277 35 2 1224 198 0 0 0 chr13 83764562 83764584 -36519728 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1224 233 0 62 0 chr13 83766287 83766319 -36517993 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1224 438 132 0 0 chr13 83766378 83766454 -36517858 - Lx9 LINE L1 -6 7638 7563 2 1224 1054 103 14 0 chr13 83769865 83770010 -36514302 + B1_Mus1 SINE Alu 2 148 0 2 1224 375 354 46 28 chr13 83770085 83770303 -36514009 - L2 LINE L2 -517 2902 2681 2 1224 1133 69 7 0 chr13 83771087 83771232 -36513080 + B1_Mus1 SINE Alu 1 146 -2 2 1224 270 0 0 0 chr13 83771334 83771364 -36512948 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1224 22 35 0 0 chr13 83772162 83772191 -36512121 + AT_rich Low_complexity Low_complexity 1 29 0 2 1224 21 0 0 0 chr13 83774217 83774238 -36510074 + AT_rich Low_complexity Low_complexity 1 21 0 2 1224 452 267 42 0 chr13 83774339 83774459 -36509853 - RSINE1 SINE B4 -35 130 6 2 1224 22 0 0 0 chr13 83775298 83775320 -36508992 + AT_rich Low_complexity Low_complexity 1 22 0 2 1224 242 211 18 0 chr13 83776868 83776925 -36507387 + B4A SINE B4 2 59 -233 2 1224 672 13 0 0 chr13 83777011 83777088 -36507224 + (TA)n Simple_repeat Simple_repeat 1 77 0 2 1224 321 264 107 82 chr13 83778561 83778767 -36505545 + L2b LINE L2 3164 3374 -1 2 1224 586 97 21 41 chr13 83780024 83780121 -36504191 + B1_Mus2 SINE Alu 47 141 -6 2 1224 826 153 260 22 chr13 83781040 83781221 -36503091 - URR1B DNA MER1_type 0 225 2 2 1224 231 308 31 62 chr13 83781288 83781416 -36502896 - PB1 SINE Alu -3 124 1 2 1224 589 302 0 0 chr13 83781775 83781901 -36502411 - RSINE1 SINE B4 -21 144 19 2 1224 294 29 0 0 chr13 83781928 83781963 -36502349 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1224 656 289 85 0 chr13 83783854 83784065 -36500247 + B4A SINE B4 4 232 -60 3 1224 297 0 0 0 chr13 83784098 83784131 -36500181 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1224 23 0 0 0 chr13 83784538 83784561 -36499751 + AT_rich Low_complexity Low_complexity 1 23 0 3 1224 326 306 0 0 chr13 83784957 83785029 -36499283 + ID4_ SINE ID 1 72 -11 3 1224 274 309 32 0 chr13 83785553 83785663 -36498649 - ID4 SINE ID -32 120 4 3 1224 262 276 45 128 chr13 83785838 83786017 -36498295 + MIR SINE MIR 21 191 -77 3 1224 600 27 0 0 chr13 83789824 83789898 -36494414 + (TG)n Simple_repeat Simple_repeat 1 74 0 3 1224 239 79 0 26 chr13 83792106 83792145 -36492167 + (TAA)n Simple_repeat Simple_repeat 2 39 0 3 1224 442 98 24 0 chr13 83793313 83793395 -36490917 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 3 1224 791 46 9 0 chr13 83793758 83793866 -36490446 + (TC)n Simple_repeat Simple_repeat 1 109 0 3 1224 21 57 0 0 chr13 83795633 83795668 -36488644 + AT_rich Low_complexity Low_complexity 1 35 0 3 1224 180 0 0 0 chr13 83795775 83795795 -36488517 + (TC)n Simple_repeat Simple_repeat 1 20 0 3 1224 333 0 0 0 chr13 83796281 83796318 -36487994 + (T)n Simple_repeat Simple_repeat 1 37 0 3 1224 353 315 7 122 chr13 83797477 83797625 -36486687 + RSINE1 SINE B4 6 136 -29 3 1224 585 0 0 0 chr13 83798561 83798626 -36485686 + (TTTTG)n Simple_repeat Simple_repeat 2 66 0 3 1224 227 333 49 0 chr13 83798765 83798846 -36485466 + B1F1 SINE Alu 37 121 -28 3 1224 618 282 68 57 chr13 83798849 83799041 -36485271 + B3A SINE B2 5 198 0 3 1224 418 306 16 0 chr13 83799072 83799177 -36485135 + PB1D10 SINE Alu 1 117 -10 3 1224 258 156 0 0 chr13 83802820 83802865 -36481447 + A-rich Low_complexity Low_complexity 2 46 0 3 1224 22 0 0 0 chr13 83802885 83802907 -36481405 + AT_rich Low_complexity Low_complexity 1 22 0 3 1224 25 0 0 0 chr13 83802922 83802947 -36481365 + AT_rich Low_complexity Low_complexity 1 25 0 3 1224 216 0 0 0 chr13 83805053 83805077 -36479235 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1224 1291 69 29 0 chr13 83807095 83807270 -36477042 + B2_Mm2 SINE B2 2 181 -14 3 1224 422 305 22 37 chr13 83807861 83807997 -36476315 + MER45R DNA Tip100 62 195 -1386 3 1224 320 187 25 51 chr13 83808002 83808081 -36476231 + MER45R DNA Tip100 1485 1561 -20 3 1224 281 285 111 105 chr13 83808285 83808438 -36475874 + B4 SINE B4 70 223 -69 3 1224 652 228 58 14 chr13 83808303 83808441 -36475871 + B1_Mur1 SINE Alu 6 149 0 3 1224 592 208 33 16 chr13 83809131 83809253 -36475059 + B1_Mur2 SINE Alu 26 149 0 3 1224 30 27 0 0 chr13 83809517 83809554 -36474758 + AT_rich Low_complexity Low_complexity 1 37 0 3 1224 306 368 40 8 chr13 83810862 83810988 -36473324 + L1MC4a LINE L1 5747 5876 -2006 3 1224 775 214 7 7 chr13 83811009 83811155 -36473157 - B1_Mus2 SINE Alu 0 147 2 3 1224 378 0 0 0 chr13 83811172 83811214 -36473098 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1224 406 188 406 0 chr13 83812416 83812512 -36471800 + B1_Mus1 SINE Alu 2 136 -12 3 1224 198 0 0 0 chr13 83812513 83812535 -36471777 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 3 1224 21 36 0 0 chr13 83812608 83812636 -36471676 + AT_rich Low_complexity Low_complexity 1 28 0 3 1224 1119 135 45 6 chr13 83812745 83812924 -36471388 + B2_Mm2 SINE B2 1 186 -9 3 1224 312 322 17 0 chr13 83812962 83813077 -36471235 + L1ME3 LINE L1 5873 5989 -173 3 1224 2607 63 40 3 chr13 83813180 83813531 -36470781 + L1_Mus2 LINE L1 6202 6565 -1 3 1224 517 222 0 0 chr13 83813552 83813633 -36470679 + B3 SINE B2 3 83 -133 3 1224 334 110 24 187 chr13 83813633 83813756 -36470556 - L1_Mus3 LINE L1 -4 6634 6532 3 1224 242 189 53 13 chr13 83813835 83813910 -36470402 + L1M2 LINE L1 5817 5894 -397 3 1224 23 0 0 0 chr13 83814850 83814873 -36469439 + AT_rich Low_complexity Low_complexity 1 23 0 3 1224 325 304 163 8 chr13 83815261 83815502 -36468810 + Lx8 LINE L1 6981 7258 -215 3 1224 20822 105 17 29 chr13 83815606 83818433 -36465879 - L1_Mus3 LINE L1 -8 6630 3761 3 1224 893 45 0 0 chr13 83818433 83818544 -36465768 - B1_Mm SINE Alu 0 147 37 3 1224 307 191 28 42 chr13 83818491 83818562 -36465750 - 4.5SRNA scRNA scRNA -8 86 17 3 1224 20822 105 17 29 chr13 83818562 83819880 -36464432 - L1_Mus3 LINE L1 -8 3760 2421 3 1224 2146 110 0 86 chr13 83819881 83820146 -36464166 + L1_Mus3 LINE L1 2035 2299 -3584 3 1224 1107 86 0 0 chr13 83820146 83820285 -36464027 + B1_Mus2 SINE Alu 1 139 -8 3 1224 2146 110 0 86 chr13 83820285 83820426 -36463886 + L1_Mm LINE L1 2300 2406 -3477 3 1224 564 260 0 16 chr13 83820445 83820570 -36463742 + B1_Mur2 SINE Alu 27 149 0 3 1224 334 354 74 42 chr13 83820718 83820933 -36463379 + HERVL40-int LTR ERVL 2899 3120 -2410 3 1224 366 161 1 14 chr13 83821150 83821229 -36463083 - L1_Mur1 LINE L1 -836 5047 4969 3 1224 5091 67 22 7 chr13 83821225 83821962 -36462350 + MusHAL1 LINE L1 1959 2706 -6 3 1224 207 0 0 0 chr13 83821962 83821985 -36462327 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1224 252 0 0 0 chr13 83822167 83822195 -36462117 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1224 1216 236 225 44 chr13 83822226 83822815 -36461497 - RMER19A LTR ERVK -12 599 1 3 1224 1859 141 14 0 chr13 83823377 83823660 -36460652 + ORR1A2 LTR MaLR 1 287 -40 3 1224 5371 79 46 27 chr13 83823677 83824576 -36459736 - MusHAL1 LINE L1 -1613 1099 184 3 1224 5826 164 3 34 chr13 83824577 83825726 -36458586 + L1_Mm LINE L1 4559 5671 -212 3 1224 1196 101 6 17 chr13 83825726 83825907 -36458405 + RMER17D2 LTR ERVK 14 192 -617 3 1224 3825 181 14 34 chr13 83825908 83826803 -36457509 + L1Md_F2 LINE L1 446 1306 -5418 3 1224 30771 65 4 6 chr13 83827241 83830382 -36453930 + L1Md_F2 LINE L1 1290 4435 -1448 3 1224 7413 37 6 2 chr13 83830382 83831276 -36453036 + L1Md_F2 LINE L1 5686 6582 0 3 1224 30771 65 4 6 chr13 83831276 83832438 -36451874 + L1Md_F2 LINE L1 4436 5586 -297 3 1224 8081 56 3 3 chr13 83832438 83833434 -36450878 + L1Md_F2 LINE L1 5587 6582 0 3 1224 2133 167 61 36 chr13 83833434 83833640 -36450672 + RMER17D2 LTR ERVK 162 455 -354 3 1224 477 0 0 0 chr13 83833640 83833693 -36450619 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1224 2133 142 28 22 chr13 83833693 83834051 -36450261 + RMER17D2 LTR ERVK 456 809 0 3 1224 4023 124 24 35 chr13 83834051 83834685 -36449627 + Lx LINE L1 5668 6294 -360 3 1224 298 133 0 0 chr13 83834685 83834730 -36449582 + ORR1A2 LTR MaLR 274 318 -8 3 1224 5520 155 175 111 chr13 83834734 83835673 -36448639 + ORR1A2-int LTR MaLR 1 848 -944 3 1224 3763 111 26 12 chr13 83835673 83836256 -36448056 + L1_Mus3 LINE L1 6048 6638 0 3 1224 5520 155 175 111 chr13 83836256 83837000 -36447312 + ORR1A2-int LTR MaLR 849 1792 0 3 1224 2050 100 26 0 chr13 83837000 83837311 -36447001 + ORR1A2 LTR MaLR 1 319 -8 3 1224 489 216 28 20 chr13 83837480 83837609 -36446703 - B1_Mur2 SINE Alu -1 148 14 3 1224 233 211 17 34 chr13 83837657 83837716 -36446596 - PB1D9 SINE Alu -61 59 2 3 1224 519 261 24 24 chr13 83838411 83838576 -36445736 - MIR SINE MIR -45 217 53 3 1224 805 178 200 6 chr13 83838859 83839034 -36445278 + B3 SINE B2 2 210 -6 3 1224 286 97 31 31 chr13 83839533 83839597 -36444715 + A-rich Low_complexity Low_complexity 2 65 0 3 1224 3278 213 34 101 chr13 83840302 83841215 -36443097 - RMER19B LTR ERVK 0 902 51 3 1224 479 280 53 0 chr13 83841186 83841318 -36442994 - RMER19B LTR ERVK -763 139 1 3 1224 758 231 17 6 chr13 83841331 83841505 -36442807 - B3A SINE B2 -18 180 5 3 1224 310 294 0 0 chr13 83841655 83841723 -36442589 - tRNA-Ala-GCY_ tRNA tRNA -7 68 1 3 1224 482 139 12 0 chr13 83841970 83842056 -36442256 + CT-rich Low_complexity Low_complexity 3 89 0 3 1224 1464 302 60 27 chr13 83842058 83842654 -36441658 - Lx8 LINE L1 -54 7419 6804 3 1224 357 24 0 0 chr13 83842950 83842992 -36441320 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 3 1224 615 198 6 17 chr13 83842999 83843112 -36441200 + polypurine Low_complexity Low_complexity 3 114 0 3 1224 987 125 11 11 chr13 83843112 83843290 -36441022 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 3 1224 615 198 6 17 chr13 83843290 83843356 -36440956 + polypurine Low_complexity Low_complexity 115 180 0 3 1224 797 199 7 4 chr13 83843356 83843627 -36440685 + GA-rich Low_complexity Low_complexity 1 271 0 3 1224 8953 53 0 6 chr13 83843839 83845631 -36438681 - L1Md_F2 LINE L1 0 6582 4804 3 1224 4513 64 8 20 chr13 83845605 83846213 -36438099 + L1Md_F2 LINE L1 4131 4731 -1152 3 1224 571 225 41 27 chr13 83846214 83846360 -36437952 - B1_Mur2 SINE Alu -1 148 1 3 1224 215 218 73 0 chr13 83846573 83846628 -36437684 + B3 SINE B2 3 61 -155 3 1224 330 67 0 0 chr13 83846628 83846673 -36437639 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1224 979 139 0 0 chr13 83847016 83847160 -36437152 + B1_Mur4 SINE Alu 2 145 -5 3 1224 26 30 0 0 chr13 83847452 83847485 -36436827 + AT_rich Low_complexity Low_complexity 1 33 0 3 1224 298 294 30 45 chr13 83847613 83847745 -36436567 - B1F SINE Alu -7 142 13 3 1224 1122 68 0 0 chr13 83847761 83847909 -36436403 + (TTC)n Simple_repeat Simple_repeat 1 148 0 3 1224 1943 107 93 40 chr13 83847993 83848315 -36435997 - Lx LINE L1 -8 6646 6308 3 1224 602 168 0 0 chr13 83848378 83848479 -36435833 - B2_Mm2 SINE B2 -87 108 8 3 1224 6812 128 37 10 chr13 83848484 83849969 -36434343 - Lx2 LINE L1 -328 6669 5147 3 1224 445 229 102 0 chr13 83850099 83850217 -36434095 - B1_Mur1 SINE Alu -18 131 2 3 1224 407 279 39 0 chr13 83850568 83850672 -36433640 + ID_B1 SINE B4 93 200 -24 3 1224 206 128 0 25 chr13 83851323 83851363 -36432949 + CT-rich Low_complexity Low_complexity 5 43 0 3 1224 474 179 0 0 chr13 83851765 83851860 -36432452 + (CA)n Simple_repeat Simple_repeat 2 96 0 3 1224 180 0 0 0 chr13 83851951 83851971 -36432341 + (CA)n Simple_repeat Simple_repeat 1 20 0 3 1224 215 91 0 83 chr13 83852116 83852136 -36432176 + T-rich Low_complexity Low_complexity 26 45 0 3 1224 382 18 36 0 chr13 83852136 83852191 -36432121 + (TTG)n Simple_repeat Simple_repeat 2 58 0 3 1224 215 91 0 83 chr13 83852191 83852218 -36432094 + T-rich Low_complexity Low_complexity 2 25 0 3 1224 519 17 0 0 chr13 83854479 83854539 -36429773 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 1224 261 0 0 0 chr13 83854539 83854567 -36429745 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1224 363 186 10 19 chr13 83856891 83856995 -36427317 + (TA)n Simple_repeat Simple_repeat 2 104 0 4 1224 201 74 0 0 chr13 83857968 83857995 -36426317 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1224 981 119 0 0 chr13 83860279 83860430 -36423882 + (GAAA)n Simple_repeat Simple_repeat 1 151 0 4 1224 370 338 0 13 chr13 83860917 83861073 -36423239 + CT-rich Low_complexity Low_complexity 2 155 0 4 1224 488 16 16 0 chr13 83861104 83861165 -36423147 + (GA)n Simple_repeat Simple_repeat 2 63 0 4 1224 208 0 62 0 chr13 83862416 83862448 -36421864 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1224 26 0 0 0 chr13 83863584 83863610 -36420702 + AT_rich Low_complexity Low_complexity 1 26 0 4 1224 877 151 12 0 chr13 83865245 83865411 -36418901 + GA-rich Low_complexity Low_complexity 1 168 0 4 1224 202 309 18 26 chr13 83866485 83866598 -36417714 + CT-rich Low_complexity Low_complexity 2 113 0 4 1224 267 305 0 0 chr13 83866868 83866950 -36417362 + G-rich Low_complexity Low_complexity 1 82 0 4 1224 195 100 0 0 chr13 83868963 83868993 -36415319 + (TGG)n Simple_repeat Simple_repeat 2 31 0 4 1224 405 0 0 0 chr13 83868993 83869038 -36415274 + (GGA)n Simple_repeat Simple_repeat 1 45 0 4 1224 578 14 14 0 chr13 83870046 83870117 -36414195 + (TG)n Simple_repeat Simple_repeat 2 73 0 4 1224 238 214 43 0 chr13 83870735 83870805 -36413507 + (CG)n Simple_repeat Simple_repeat 1 73 0 4 1224 28 29 0 0 chr13 83870865 83870900 -36413412 + GC_rich Low_complexity Low_complexity 1 35 0 4 1224 351 0 0 0 chr13 83871233 83871272 -36413040 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1224 444 136 0 0 chr13 83871504 83871592 -36412720 + (GGAA)n Simple_repeat Simple_repeat 3 90 0 4 1224 22 0 0 0 chr13 83871644 83871666 -36412646 + AT_rich Low_complexity Low_complexity 1 22 0 4 1224 222 37 0 0 chr13 83874205 83874232 -36410080 + (TA)n Simple_repeat Simple_repeat 1 27 0 4 1224 291 157 0 0 chr13 83877529 83877580 -36406732 + (CCG)n Simple_repeat Simple_repeat 2 52 0 4 1224 218 310 0 17 chr13 83880048 83880107 -36404205 + polypyrimidine Low_complexity Low_complexity 4 61 0 4 1224 24 53 0 0 chr13 83882803 83882841 -36401471 + AT_rich Low_complexity Low_complexity 1 38 0 4 1224 1214 176 5 0 chr13 83883132 83883331 -36400981 + B3 SINE B2 1 200 -16 4 1224 414 0 0 0 chr13 83883331 83883377 -36400935 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 4 1224 1104 96 6 11 chr13 83883481 83883660 -36400652 + (TCC)n Simple_repeat Simple_repeat 3 180 0 4 1224 468 35 0 0 chr13 83883660 83883717 -36400595 + (TTCTCC)n Simple_repeat Simple_repeat 3 60 0 4 1224 617 200 64 0 chr13 83883719 83883844 -36400468 - B1_Mur3 SINE Alu -14 135 3 4 1224 200 34 0 33 chr13 83886010 83886040 -36398272 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 4 1225 477 262 36 0 chr13 83887308 83887431 -36396881 - B1F SINE Alu -7 142 16 4 1225 201 156 0 0 chr13 83887441 83887473 -36396839 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 1225 195 42 0 0 chr13 83887905 83887929 -36396383 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1225 198 0 0 0 chr13 83890649 83890671 -36393641 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 4 1225 438 257 106 0 chr13 83890672 83890785 -36393527 - B1_Mur2 SINE Alu -11 138 14 4 1225 277 289 79 79 chr13 83890785 83890811 -36393501 - ID_B1 SINE B4 -11 213 75 4 1225 333 176 0 48 chr13 83891091 83891216 -36393096 + (CATATA)n Simple_repeat Simple_repeat 4 122 0 4 1225 219 204 20 0 chr13 83891230 83891279 -36393033 + (TA)n Simple_repeat Simple_repeat 2 51 0 4 1225 716 172 82 0 chr13 83891340 83891474 -36392838 - B1_Mus1 SINE Alu -1 147 3 4 1225 298 349 108 0 chr13 83891541 83891670 -36392642 - B1F SINE Alu -6 143 1 4 1225 452 179 8 0 chr13 83892407 83892524 -36391788 + (TG)n Simple_repeat Simple_repeat 1 118 0 4 1225 315 312 34 53 chr13 83892550 83892744 -36391568 - B4A SINE B4 -3 289 1 4 1225 889 246 19 15 chr13 83892989 83893195 -36391117 + B3 SINE B2 1 207 -9 4 1225 719 189 263 12 chr13 83893335 83893506 -36390806 + B3 SINE B2 2 215 -1 4 1225 297 215 30 15 chr13 83893921 83893987 -36390325 - B1F1 SINE Alu -2 147 81 4 1225 268 271 47 0 chr13 83894408 83894493 -36389819 - ID4_ SINE ID -40 112 24 4 1225 215 353 66 22 chr13 83894539 83894675 -36389637 - L2a LINE L2 -10 3416 3275 4 1225 946 168 7 0 chr13 83894679 83894828 -36389484 + B1_Mur4 SINE Alu 1 150 0 4 1225 299 318 23 0 chr13 83895992 83896080 -36388232 + PB1D10 SINE Alu 22 111 -6 4 1225 287 339 35 18 chr13 83896495 83896609 -36387703 - B1F1 SINE Alu -33 116 1 4 1225 730 248 49 15 chr13 83897686 83897891 -36386421 - ORR1C2 LTR MaLR 0 384 173 4 1225 238 164 0 56 chr13 83897891 83897962 -36386350 + GA-rich Low_complexity Low_complexity 2 68 0 4 1225 696 177 88 41 chr13 83897962 83897988 -36386324 - ORR1C2 LTR MaLR -191 183 157 4 1225 1028 128 6 0 chr13 83897988 83898167 -36386145 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 4 1225 696 177 88 41 chr13 83898167 83898311 -36386001 - ORR1C2 LTR MaLR -218 156 5 4 1225 198 171 0 0 chr13 83898416 83898457 -36385855 + T-rich Low_complexity Low_complexity 3 43 0 4 1225 189 74 0 0 chr13 83898870 83898897 -36385415 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 4 1225 690 186 31 0 chr13 83898943 83899072 -36385240 + B1_Mur3 SINE Alu 1 133 -16 4 1225 735 262 152 36 chr13 83900413 83900742 -36383570 - MLT1A1 LTR MaLR 0 408 42 4 1225 26 30 0 0 chr13 83902699 83902732 -36381580 + AT_rich Low_complexity Low_complexity 1 33 0 4 1225 280 330 110 0 chr13 83903179 83903279 -36381033 - MER5B DNA MER1_type -7 171 61 4 1225 647 309 57 46 chr13 83904031 83904313 -36379999 + B4A SINE B4 1 285 -7 4 1225 248 335 77 18 chr13 83904652 83904822 -36379490 + RMER4B LTR ERVK 7 186 -399 4 1225 835 280 123 34 chr13 83905880 83906238 -36378074 - MLT1B LTR MaLR 0 390 1 4 1225 837 216 81 20 chr13 83906815 83907013 -36377299 - B3 SINE B2 -5 211 2 4 1225 309 281 12 0 chr13 83907031 83907113 -36377199 + ERVL-E-int LTR ERVL 4437 4519 -1148 4 1225 698 211 7 39 chr13 83907131 83907270 -36377042 + B1_Mur1 SINE Alu 2 140 -9 4 1225 324 0 0 0 chr13 83907270 83907306 -36377006 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 4 1225 698 211 7 39 chr13 83907306 83907319 -36376993 + B1_Mur1 SINE Alu 141 149 0 4 1225 862 204 220 24 chr13 83907513 83907849 -36376463 - Lx8 LINE L1 0 7473 7072 4 1225 361 245 44 148 chr13 83907863 83908166 -36376146 - L1M4 LINE L1 -971 5473 5197 4 1225 849 228 20 10 chr13 83908212 83908407 -36375905 - B3A SINE B2 -1 197 1 4 1225 403 310 92 38 chr13 83908412 83908704 -36375608 - L1M4 LINE L1 -960 5186 4879 4 1225 36 53 0 0 chr13 83909074 83909131 -36375181 + AT_rich Low_complexity Low_complexity 1 57 0 4 1225 687 238 82 63 chr13 83909165 83909371 -36374941 - B3 SINE B2 -6 210 1 4 1225 620 332 45 0 chr13 83909687 83909886 -36374426 - B3 SINE B2 -7 209 2 4 1225 1481 67 0 10 chr13 83909901 83910097 -36374215 - B2_Mm2 SINE B2 0 195 2 4 1225 300 144 21 72 chr13 83910499 83910596 -36373716 - Lx LINE L1 0 6654 6563 4 1225 198 0 0 0 chr13 83911006 83911028 -36373284 + (TAA)n Simple_repeat Simple_repeat 3 24 0 4 1225 24 53 0 0 chr13 83911183 83911221 -36373091 + AT_rich Low_complexity Low_complexity 1 38 0 4 1225 419 230 87 0 chr13 83912223 83912349 -36371963 - L1MA4 LINE L1 -385 5915 5779 4 1225 219 372 64 0 chr13 83912349 83912443 -36371869 - B4A SINE B4 -163 129 30 4 1225 406 299 122 30 chr13 83912545 83912676 -36371636 - B1_Mur1 SINE Alu -6 143 1 4 1225 510 300 51 45 chr13 83913401 83913579 -36370733 - MER2 DNA MER2_type -8 337 159 4 1225 672 108 29 7 chr13 83915790 83915930 -36368382 - Lx3_Mus LINE L1 0 7009 6867 4 1225 1883 174 58 11 chr13 83916002 83916363 -36367949 + ORR1C1 LTR MaLR 1 378 0 4 1225 7861 230 32 46 chr13 83917284 83919347 -36364965 - Lx7 LINE L1 -44 7652 5618 4 1225 1978 217 59 9 chr13 83919351 83919775 -36364537 + RMER15 LTR ERVL 131 575 0 4 1225 775 239 201 17 chr13 83919828 83919905 -36364407 - Lx8 LINE L1 -519 6954 6849 4 1225 354 91 0 0 chr13 83919905 83919960 -36364352 + (CAA)n Simple_repeat Simple_repeat 1 55 0 4 1225 775 239 201 17 chr13 83919960 83920180 -36364132 - Lx8 LINE L1 -625 6848 6602 4 1225 201 371 34 0 chr13 83920602 83920691 -36363621 - MIRm SINE MIR -32 244 153 4 1225 761 292 74 51 chr13 83921215 83921728 -36362584 - L1MC3 LINE L1 -31 7754 7230 4 1225 1102 242 118 74 chr13 83921942 83922442 -36361870 + RMER6A LTR ERVK 233 754 -2 4 1225 395 287 111 54 chr13 83922463 83922557 -36361755 - L1MC3 LINE L1 -1630 6155 6063 4 1225 2562 105 30 10 chr13 83922557 83922953 -36361359 + Lx LINE L1 6247 6650 -4 4 1225 395 240 144 33 chr13 83922953 83923177 -36361135 - L1MC3 LINE L1 -1723 6062 5820 4 1225 333 198 181 38 chr13 83924104 83924209 -36360103 + B1_Mm SINE Alu 18 137 -10 4 1225 224 333 84 65 chr13 83924301 83924455 -36359857 - RSINE1 SINE B4 -7 158 2 4 1225 27 62 0 0 chr13 83924814 83924862 -36359450 + AT_rich Low_complexity Low_complexity 1 48 0 4 1225 220 309 20 20 chr13 83925657 83925756 -36358556 + CT-rich Low_complexity Low_complexity 2 100 0 4 1225 228 352 70 0 chr13 83925763 83925834 -36358478 - ID2 SINE ID -2 81 6 4 1225 455 313 60 29 chr13 83925843 83926159 -36358153 - L1MDa LINE L1 -4704 1929 1604 4 1225 204 285 0 0 chr13 83926184 83926363 -36357949 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1225 308 83 21 0 chr13 83926376 83926424 -36357888 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1225 354 45 0 0 chr13 83926426 83926470 -36357842 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1225 308 83 21 0 chr13 83926559 83926607 -36357705 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1225 426 39 0 0 chr13 83926609 83926661 -36357651 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1225 364 282 62 14 chr13 83926676 83926820 -36357492 - L1MDa LINE L1 -4995 1545 1395 4 1225 492 18 0 0 chr13 83926905 83926962 -36357350 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1225 253 93 18 18 chr13 83927024 83927079 -36357233 + (TCTCTG)n Simple_repeat Simple_repeat 6 60 0 5 1225 22 35 0 0 chr13 83927460 83927489 -36356823 + AT_rich Low_complexity Low_complexity 1 29 0 5 1225 459 0 0 0 chr13 83927542 83927593 -36356719 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1225 282 156 0 0 chr13 83927828 83927873 -36356439 + L1_Mm LINE L1 5541 5585 -298 5 1225 5321 176 28 8 chr13 83927850 83928851 -36355461 + Lx3C LINE L1 5692 6712 -264 5 1225 803 262 123 29 chr13 83928851 83929225 -36355087 + MTC-int LTR MaLR 483 994 -264 5 1225 1689 77 0 0 chr13 83929225 83929447 -36354865 - Lx2 LINE L1 -1070 5927 5706 5 1225 547 248 0 26 chr13 83929447 83929563 -36354749 - MTD LTR MaLR -203 216 104 5 1225 1549 167 18 11 chr13 83929563 83929836 -36354476 + Lx7 LINE L1 6768 7042 -654 5 1225 227 330 70 44 chr13 83929836 83929950 -36354362 + MLT1-int LTR MaLR 679 795 -576 5 1225 1333 82 30 5 chr13 83929958 83930155 -36354157 + MTB LTR MaLR 1 202 -194 5 1225 1218 47 0 0 chr13 83930155 83930303 -36354009 - L1Md_F3 LINE L1 -380 6204 6057 5 1225 2807 41 0 9 chr13 83930303 83930650 -36353662 + L1Md_F3 LINE L1 6227 6570 -14 5 1225 1624 64 5 5 chr13 83930671 83930890 -36353422 + MTB LTR MaLR 182 400 0 5 1225 570 255 82 20 chr13 83930891 83931087 -36353225 + Lx6 LINE L1 7160 7367 -93 5 1225 2495 169 89 4 chr13 83931122 83931603 -36352709 + RLTR28 LTR ERVL 1 522 -2 5 1225 286 325 43 26 chr13 83931637 83931754 -36352558 - MTD LTR MaLR -300 119 1 5 1225 325 233 183 59 chr13 83931963 83932194 -36352118 + L1MC5 LINE L1 6700 7028 -1014 5 1225 367 273 142 31 chr13 83932537 83932798 -36351514 + MER33 DNA MER1_type 25 314 -10 5 1225 306 0 0 0 chr13 83933110 83933144 -36351168 + (TTTCC)n Simple_repeat Simple_repeat 1 34 0 5 1225 887 50 0 96 chr13 83933144 83933342 -36350970 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 5 1225 216 0 0 0 chr13 83933342 83933366 -36350946 + (TTTCC)n Simple_repeat Simple_repeat 2 25 0 5 1225 1505 288 47 13 chr13 83933373 83933519 -36350793 - Lx9 LINE L1 -791 6853 6697 5 1225 243 0 0 0 chr13 83933519 83933546 -36350766 + (TTAGGG)n Simple_repeat Simple_repeat 1 27 0 5 1225 1505 288 47 13 chr13 83933546 83933870 -36350442 - Lx9 LINE L1 -948 6696 6367 5 1225 396 0 0 0 chr13 83933905 83933949 -36350363 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1225 322 268 3 12 chr13 83934154 83934294 -36350018 - L1M3 LINE L1 -617 5674 5538 5 1225 759 312 65 59 chr13 83934312 83934666 -36349646 - MLT1A0 LTR MaLR 0 365 10 5 1225 5402 216 83 44 chr13 83934823 83934962 -36349350 - Lx7 LINE L1 0 7696 7533 5 1225 222 37 0 0 chr13 83934962 83934989 -36349323 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1225 5402 216 83 44 chr13 83934989 83936229 -36348083 - Lx7 LINE L1 -164 7532 6263 5 1225 289 113 65 0 chr13 83936522 83936584 -36347728 + CT-rich Low_complexity Low_complexity 2 67 0 5 1225 667 145 8 8 chr13 83936611 83936736 -36347576 - Lx2A1 LINE L1 -38 6970 6846 5 1225 21 0 0 0 chr13 83936818 83936839 -36347473 + AT_rich Low_complexity Low_complexity 1 21 0 5 1225 236 353 58 28 chr13 83937201 83937414 -36346898 + MIR SINE MIR 2 207 -61 5 1225 2048 198 48 0 chr13 83937934 83938328 -36345984 + MTC LTR MaLR 1 413 -8 5 1225 1145 110 0 6 chr13 83938452 83938790 -36345522 + (TTTC)n Simple_repeat Simple_repeat 1 336 0 5 1225 3548 116 6 4 chr13 83938793 83939322 -36344990 - L1_Mus3 LINE L1 -17 6621 6092 5 1225 24 0 0 0 chr13 83939461 83939485 -36344827 + AT_rich Low_complexity Low_complexity 1 24 0 5 1225 611 174 11 11 chr13 83939497 83939677 -36344635 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1225 305 252 302 0 chr13 83939680 83939819 -36344493 - B3A SINE B2 -17 181 1 5 1225 447 19 0 0 chr13 83940266 83940318 -36343994 + (TATG)n Simple_repeat Simple_repeat 2 53 0 5 1225 1175 102 6 0 chr13 83940358 83940535 -36343777 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 5 1225 3132 160 65 107 chr13 83941165 83941215 -36343097 + RMER12 LTR ERVK 1 51 -1271 5 1225 252 0 0 0 chr13 83941215 83941243 -36343069 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 5 1225 3132 160 65 107 chr13 83941243 83941827 -36342485 + RMER12 LTR ERVK 52 614 -708 5 1225 3999 71 4 11 chr13 83941827 83942351 -36341961 - L1_Mus1 LINE L1 0 6567 6048 5 1225 3132 160 65 107 chr13 83942351 83942461 -36341851 + RMER12 LTR ERVK 615 705 -617 5 1225 1422 74 5 11 chr13 83942461 83942652 -36341660 + B2_Mm1t SINE B2 1 190 -3 5 1225 3132 160 65 107 chr13 83942652 83942736 -36341576 + RMER12 LTR ERVK 706 795 -527 5 1225 902 0 28 0 chr13 83942744 83942852 -36341460 + (TTTCC)n Simple_repeat Simple_repeat 3 113 0 5 1225 231 254 0 0 chr13 83942856 83942919 -36341393 + T-rich Low_complexity Low_complexity 1 63 0 5 1225 403 286 20 79 chr13 83942922 83942933 -36341379 + RMER12 LTR ERVK 994 1004 -318 5 1225 846 78 0 0 chr13 83942933 83943061 -36341251 + (TCCCC)n Simple_repeat Simple_repeat 5 132 0 5 1225 403 286 20 79 chr13 83943061 83943201 -36341111 + RMER12 LTR ERVK 1005 1136 -186 5 1225 731 183 8 8 chr13 83943326 83943458 -36340854 + RMER12 LTR ERVK 1145 1276 -46 5 1225 577 366 120 23 chr13 83943571 83944239 -36340073 - L2a LINE L2 -281 3145 2409 5 1225 20486 105 37 19 chr13 83944436 83948498 -36335814 - L1_Mur1 LINE L1 -1461 4425 3 5 1225 1746 210 50 78 chr13 83948575 83949116 -36335196 + RLTR31A_Mm LTR ERVK 1 526 -58 5 1225 26 64 0 0 chr13 83949155 83949202 -36335110 + AT_rich Low_complexity Low_complexity 1 47 0 5 1225 213 339 0 0 chr13 83951052 83951117 -36333195 + CT-rich Low_complexity Low_complexity 1 65 0 5 1225 226 239 11 193 chr13 83951198 83951286 -36333026 - ID SINE ID -151 73 2 5 1225 33828 35 0 0 chr13 83952360 83957565 -36326747 + L1Md_T LINE L1 288 5589 -297 5 1225 9056 4 0 0 chr13 83957565 83958561 -36325751 + L1Md_T LINE L1 5590 6585 0 5 1225 261 0 0 0 chr13 83959466 83959495 -36324817 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 5 1225 229 341 17 52 chr13 83959503 83959676 -36324636 + L2a LINE L2 2937 3103 -323 5 1225 555 290 10 57 chr13 83959684 83959878 -36324434 - B3A SINE B2 -8 187 3 5 1225 219 223 6 57 chr13 83961835 83962011 -36322301 + CT-rich Low_complexity Low_complexity 6 172 0 5 1225 240 279 29 22 chr13 83962176 83962315 -36321997 - L1M1 LINE L1 -403 5897 5758 5 1225 212 351 44 0 chr13 83962457 83962571 -36321741 - MER5A DNA MER1_type -6 183 65 5 1225 29 47 0 0 chr13 83963233 83963276 -36321036 + AT_rich Low_complexity Low_complexity 1 43 0 5 1225 276 204 0 0 chr13 83963928 83963977 -36320335 - ID SINE ID -153 71 23 5 1225 232 312 50 30 chr13 83964684 83964783 -36319529 - MLT1H2 LTR MaLR -293 196 96 5 1225 666 276 174 36 chr13 83965043 83965491 -36318821 + Lx9 LINE L1 7120 7629 -15 5 1225 918 65 16 0 chr13 83965822 83965946 -36318366 - L1_Mus1 LINE L1 -354 6213 6088 5 1225 3253 61 12 0 chr13 83965946 83966353 -36317959 + L1_Mus1 LINE L1 6155 6566 -1 5 1225 1573 158 73 41 chr13 83967188 83967317 -36316995 - Lx4A LINE L1 -7 7051 6923 5 1225 450 0 0 0 chr13 83967317 83967367 -36316945 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1225 1573 158 73 41 chr13 83967367 83967553 -36316759 - Lx4A LINE L1 -136 6922 6726 5 1225 294 192 44 80 chr13 83967576 83967689 -36316623 - Lx7 LINE L1 0 7696 7603 5 1225 456 19 0 0 chr13 83967689 83967742 -36316570 + (TCC)n Simple_repeat Simple_repeat 2 54 0 5 1225 297 75 0 0 chr13 83967747 83967787 -36316525 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 5 1225 1571 228 67 33 chr13 83967901 83968350 -36315962 - Lx7 LINE L1 -320 7376 6913 5 1225 270 257 157 17 chr13 83968402 83968517 -36315795 + ORR1D2 LTR MaLR 240 370 0 5 1225 249 274 210 31 chr13 83968872 83969034 -36315278 - MIR SINE MIR -4 258 68 5 1225 4016 173 73 75 chr13 83969061 83969953 -36314359 - RMER19B LTR ERVK -12 890 1 5 1225 26 50 0 0 chr13 83970167 83970207 -36314105 + AT_rich Low_complexity Low_complexity 1 40 0 5 1225 529 306 95 16 chr13 83970407 83970596 -36313716 + MTD LTR MaLR 1 204 -215 5 1225 576 239 5 96 chr13 83970601 83970819 -36313493 - L1M3 LINE L1 -1048 5092 4895 5 1225 245 303 70 40 chr13 83970841 83970979 -36313333 - MIRc SINE MIR -43 219 85 5 1225 180 0 0 0 chr13 83971042 83971062 -36313250 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 5 1225 433 304 15 75 chr13 83973501 83973700 -36310612 + B3A SINE B2 1 187 -11 5 1225 201 109 146 0 chr13 83973705 83973760 -36310552 + (TTAA)n Simple_repeat Simple_repeat 1 63 0 5 1225 30 27 0 0 chr13 83973843 83973880 -36310432 + AT_rich Low_complexity Low_complexity 1 37 0 5 1225 1044 72 0 0 chr13 83974120 83974259 -36310053 - L1_Mus3 LINE L1 -141 6497 6359 5 1225 511 117 30 23 chr13 83974262 83974393 -36309919 + L1_Mus3 LINE L1 6501 6632 -6 5 1225 214 162 0 0 chr13 83975459 83975496 -36308816 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 5 1225 311 293 63 24 chr13 83975963 83976089 -36308223 - B1F2 SINE Alu 0 149 19 5 1225 23013 113 30 3 chr13 83976455 83980392 -36303920 - L1VL4 LINE L1 -779 5104 1062 5 1225 1851 63 0 8 chr13 83980392 83980632 -36303680 + L1_Mus1 LINE L1 6330 6567 0 5 1225 2642 166 3 20 chr13 83980632 83980965 -36303347 - L1VL4 LINE L1 -5596 1061 728 5 1225 682 203 19 13 chr13 83980965 83981120 -36303192 - L1VL4 LINE L1 -5753 863 708 5 1225 318 278 26 9 chr13 83981120 83981236 -36303076 - L1VL4 LINE L1 -5824 792 675 5 1225 473 203 31 169 chr13 83981317 83981477 -36302835 - L1VL2 LINE L1 -6065 357 179 5 1225 324 290 57 0 chr13 83981611 83981735 -36302577 + L1_Mur3 LINE L1 5739 5869 -11 5 1225 217 310 94 12 chr13 83982011 83982096 -36302216 + L3 LINE CR1 3559 3650 -839 5 1225 459 63 0 0 chr13 83982259 83982322 -36301990 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1225 1614 220 57 20 chr13 83982426 83982880 -36301432 + Lx7 LINE L1 7034 7504 -192 5 1225 820 123 0 48 chr13 83982890 83982986 -36301326 + polypyrimidine Low_complexity Low_complexity 86 180 0 5 1225 1073 123 0 0 chr13 83982986 83983132 -36301180 - B1_Mus1 SINE Alu 0 148 3 5 1225 820 123 0 48 chr13 83983132 83983222 -36301090 + polypyrimidine Low_complexity Low_complexity 3 85 0 5 1225 319 134 29 15 chr13 83983224 83983292 -36301020 + CT-rich Low_complexity Low_complexity 3 71 0 5 1225 512 230 82 30 chr13 83983292 83983525 -36300787 + Lx7 LINE L1 7443 7687 -9 5 1225 405 270 113 20 chr13 83983958 83984109 -36300203 + MER2B DNA MER2_type 1 165 -171 5 1225 1084 232 13 4 chr13 83984227 83984456 -36299856 + MER2 DNA MER2_type 115 345 0 5 1225 24 0 0 0 chr13 83985417 83985441 -36298871 + AT_rich Low_complexity Low_complexity 1 24 0 5 1225 3247 201 107 115 chr13 83985601 83985722 -36298590 - RMER1A Other Other 0 1030 883 5 1225 414 0 0 0 chr13 83985722 83985768 -36298544 + (CCA)n Simple_repeat Simple_repeat 3 48 0 5 1225 3247 231 82 76 chr13 83985768 83987400 -36296912 - RMER1A Other Other -148 882 1 5 1225 877 299 60 13 chr13 83987384 83987699 -36296613 - RMER1B Other Other -652 414 85 5 1225 615 333 55 22 chr13 83988741 83989014 -36295298 + B4A SINE B4 2 283 -9 6 1225 214 351 21 56 chr13 83989341 83989483 -36294829 - L2c LINE L2 -202 3185 3049 6 1225 649 298 145 33 chr13 83989917 83990254 -36294058 + MLT1D LTR MaLR 1 375 -130 6 1225 1956 238 67 2 chr13 83990658 83991104 -36293208 - Lx6 LINE L1 -7 7453 6979 6 1225 9270 137 10 19 chr13 83991120 83993813 -36290499 - L1Md_F2 LINE L1 -14 6568 3907 6 1225 385 375 41 41 chr13 83993973 83994243 -36290069 - B4A SINE B4 -22 270 1 6 1225 240 364 35 46 chr13 83995076 83995249 -36289063 - L2c LINE L2 -809 2610 2440 6 1225 304 340 203 37 chr13 83995308 83995718 -36288594 - L2c LINE L2 0 3387 2910 6 1225 1046 218 109 43 chr13 83995774 83995902 -36288410 + ORR1D1 LTR MaLR 1 157 -217 6 1225 594 41 0 0 chr13 83995902 83995975 -36288337 + (TC)n Simple_repeat Simple_repeat 2 74 0 6 1225 1046 218 109 43 chr13 83995975 83996196 -36288116 + ORR1D1 LTR MaLR 158 373 -1 6 1225 213 65 0 0 chr13 83996606 83996637 -36287675 + (TTG)n Simple_repeat Simple_repeat 2 32 0 6 1225 744 262 55 40 chr13 83996783 83997184 -36287128 + L1MA5 LINE L1 5447 5853 -447 6 1225 353 150 117 0 chr13 83997198 83997258 -36287054 + RSINE1 SINE B4 77 143 -22 6 1225 186 167 0 0 chr13 83999414 83999450 -36284862 + (TA)n Simple_repeat Simple_repeat 1 36 0 6 1225 221 254 0 0 chr13 83999800 83999863 -36284449 + T-rich Low_complexity Low_complexity 1 63 0 6 1225 318 250 0 0 chr13 83999863 83999927 -36284385 - ID4_ SINE ID -11 72 9 6 1225 1863 303 68 38 chr13 84000007 84000763 -36283549 - Lx8 LINE L1 -342 7131 6354 1 1225 278 347 46 80 chr13 84000796 84000922 -36283390 + Lx8 LINE L1 7214 7330 -143 2 1225 488 232 129 42 chr13 84000922 84001115 -36283197 + B3 SINE B2 1 210 -6 3 1225 278 347 46 80 chr13 84001115 84001226 -36283086 + Lx8 LINE L1 7331 7443 -30 2 1225 503 151 14 0 chr13 84001251 84001390 -36282922 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 4 1225 189 0 0 0 chr13 84001390 84001411 -36282901 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1225 346 252 160 41 chr13 84001424 84001643 -36282669 - Charlie1b DNA MER1_type -55 468 224 6 1225 284 301 0 41 chr13 84001654 84001751 -36282561 + Lx8 LINE L1 6765 6857 -616 7 1225 991 72 51 0 chr13 84001768 84001906 -36282406 - B1_Mm SINE Alu 0 147 3 8 1225 555 330 58 71 chr13 84001918 84002019 -36282293 + Lx8 LINE L1 6854 6959 -514 7 1225 4982 62 3 0 chr13 84002019 84002651 -36281661 - L1_Mus1 LINE L1 0 6567 5934 9 1225 555 330 58 71 chr13 84002651 84002930 -36281382 + Lx8 LINE L1 6960 7229 -244 7 1225 256 284 40 0 chr13 84002940 84003014 -36281298 - MLT1A LTR MaLR -297 77 1 1 1225 513 0 0 0 chr13 84004430 84004487 -36279825 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 1225 210 363 0 21 chr13 84004651 84004744 -36279568 - MIRc SINE MIR -116 152 62 1 1225 681 129 0 0 chr13 84007699 84007815 -36276497 + (GA)n Simple_repeat Simple_repeat 2 117 0 1 1225 558 79 0 0 chr13 84007964 84008040 -36276272 + (CA)n Simple_repeat Simple_repeat 1 76 0 1 1225 189 246 0 0 chr13 84008040 84008105 -36276207 + (TA)n Simple_repeat Simple_repeat 2 66 0 1 1225 23 0 0 0 chr13 84009974 84009997 -36274315 + AT_rich Low_complexity Low_complexity 1 23 0 1 1225 773 73 9 0 chr13 84010122 84010231 -36274081 + (CA)n Simple_repeat Simple_repeat 1 110 0 1 1225 234 0 0 0 chr13 84012232 84012258 -36272054 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1225 22 0 0 0 chr13 84013111 84013133 -36271179 + AT_rich Low_complexity Low_complexity 1 22 0 1 1225 30 45 0 0 chr13 84014739 84014783 -36269529 + AT_rich Low_complexity Low_complexity 1 44 0 2 1225 261 0 0 0 chr13 84016937 84016966 -36267346 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 2 1226 235 310 11 22 chr13 84017177 84017266 -36267046 - Lx8 LINE L1 -11 7462 7375 2 1226 186 43 0 0 chr13 84017865 84017888 -36266424 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1226 21 57 0 0 chr13 84018220 84018255 -36266057 + AT_rich Low_complexity Low_complexity 1 35 0 2 1226 921 272 71 25 chr13 84018358 84018807 -36265505 + Lx7 LINE L1 7227 7696 0 2 1226 302 374 19 25 chr13 84021861 84022020 -36262292 - RSINE1 SINE B4 -6 159 2 2 1226 225 94 0 0 chr13 84022338 84022370 -36261942 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2 1226 201 74 0 0 chr13 84025225 84025252 -36259060 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2 1226 524 15 15 0 chr13 84026048 84026113 -36258199 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 1226 6758 59 15 1 chr13 84027928 84028788 -36255524 + L1_Mus1 LINE L1 5696 6567 0 3 1226 1279 242 77 10 chr13 84028831 84029144 -36255168 - Lx5 LINE L1 0 7050 6717 3 1226 234 128 0 0 chr13 84029951 84029990 -36254322 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 3 1226 700 153 92 0 chr13 84029991 84030122 -36254190 - B1_Mur4 SINE Alu -5 145 3 3 1226 234 292 0 0 chr13 84030174 84030239 -36254073 + MLT1L LTR MaLR 542 606 -4 3 1226 1910 235 85 25 chr13 84030593 84031160 -36253152 + Lx7 LINE L1 6797 7397 -299 3 1226 180 273 0 0 chr13 84031206 84031283 -36253029 + (CA)n Simple_repeat Simple_repeat 1 77 0 3 1226 367 127 0 18 chr13 84031283 84031339 -36252973 + HAL1-3A_ME LINE L1 1976 2030 -828 3 1226 1062 44 0 0 chr13 84031859 84031996 -36252316 + L1_Mus2 LINE L1 6430 6566 0 3 1226 29 47 0 0 chr13 84032119 84032162 -36252150 + AT_rich Low_complexity Low_complexity 1 43 0 3 1226 324 0 0 0 chr13 84032178 84032214 -36252098 + (TAA)n Simple_repeat Simple_repeat 2 37 0 4 1226 245 301 96 11 chr13 84032246 84032340 -36251972 - PB1 SINE Alu -25 102 1 4 1226 1575 295 71 24 chr13 84032349 84033057 -36251255 - L1MB3 LINE L1 -54 6129 5389 4 1226 351 0 0 0 chr13 84033058 84033097 -36251215 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 1226 342 0 0 0 chr13 84033097 84033134 -36251178 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1226 493 326 64 49 chr13 84033220 84033691 -36250621 - L1M4 LINE L1 -771 5375 4898 4 1226 345 351 7 15 chr13 84034244 84034380 -36249932 + L1MEc LINE L1 86 220 -6180 4 1226 569 279 109 41 chr13 84034549 84034850 -36249462 - MTEa LTR MaLR -3 376 1 4 1226 458 275 297 26 chr13 84034854 84035123 -36249189 + L1MEc LINE L1 411 752 -5648 4 1226 296 288 157 23 chr13 84035379 84035596 -36248716 + L1MEc LINE L1 1292 1537 -4863 4 1226 286 218 158 0 chr13 84035591 84035692 -36248620 + L1MEc LINE L1 1655 1771 -4629 4 1226 369 248 61 52 chr13 84035700 84035815 -36248497 + PB1D10 SINE Alu 1 116 -1 4 1226 255 271 109 20 chr13 84036051 84036187 -36248125 + L1MA4A LINE L1 6141 6292 -11 4 1226 4942 61 2 0 chr13 84036187 84036812 -36247500 + L1_Mus1 LINE L1 5942 6567 0 5 1226 332 320 123 24 chr13 84036958 84037291 -36247021 + L1MD LINE L1 5454 5819 -540 5 1226 185 182 18 0 chr13 84037374 84037429 -36246883 + CT-rich Low_complexity Low_complexity 2 57 0 5 1226 2444 116 9 102 chr13 84037439 84037891 -36246421 - RLTR23 LTR ERV1 -20 410 1 5 1226 224 283 20 10 chr13 84037891 84037991 -36246321 + CT-rich Low_complexity Low_complexity 1 101 0 5 1226 3016 180 56 0 chr13 84038205 84038743 -36245569 + RMER15 LTR ERVL 1 568 -7 5 1226 3196 120 2 41 chr13 84038743 84039280 -36245032 - L1_Mus3 LINE L1 -180 5703 5188 5 1226 1187 86 6 0 chr13 84039280 84039442 -36244870 + L1_Mus3 LINE L1 5754 5916 -722 5 1226 1915 140 3 13 chr13 84039444 84039735 -36244577 - RLTR10E LTR ERVK -2 388 24 5 1226 251 28 28 0 chr13 84039735 84039771 -36244541 + (TTTG)n Simple_repeat Simple_repeat 4 40 0 5 1226 1915 138 3 13 chr13 84039771 84039788 -36244524 - RLTR10E LTR ERVK -288 23 7 5 1226 5130 70 5 80 chr13 84039788 84040575 -36243737 + L1_Mus3 LINE L1 5906 6633 -5 5 1226 237 130 65 0 chr13 84040731 84040777 -36243535 - Lx9 LINE L1 -596 7048 7000 6 1226 428 339 49 6 chr13 84040781 84041180 -36243132 + L1MC LINE L1 5222 5641 -538 6 1226 489 151 0 0 chr13 84041370 84041456 -36242856 + (TG)n Simple_repeat Simple_repeat 2 87 0 6 1226 246 344 75 62 chr13 84041820 84041981 -36242331 + MLT1G1 LTR MaLR 185 347 -244 6 1226 255 281 0 0 chr13 84041971 84042035 -36242277 + MLT1G1 LTR MaLR 514 577 -2 6 1226 289 304 128 70 chr13 84042128 84042395 -36241917 - B4A SINE B4 -8 284 4 6 1226 342 337 108 6 chr13 84043199 84043366 -36240946 + MER63A DNA AcHobo 21 204 -6 6 1226 2953 117 0 26 chr13 84043882 84044346 -36239966 - Lx3_Mus LINE L1 -394 6615 6164 6 1226 2777 99 29 31 chr13 84044346 84044792 -36239520 + Lx3_Mus LINE L1 6557 7001 -8 6 1226 23193 89 10 11 chr13 84044834 84047892 -36236420 - L1_Mur1 LINE L1 -1220 4666 1613 6 1226 432 0 0 0 chr13 84047892 84047940 -36236372 + (TA)n Simple_repeat Simple_repeat 1 48 0 6 1226 23193 146 110 20 chr13 84047940 84049157 -36235155 - L1_Mur1 LINE L1 -4274 1612 34 6 1226 1199 279 73 34 chr13 84049157 84049539 -36234773 - RMER19B LTR ERVK -159 743 347 6 1226 215 216 0 0 chr13 84050664 84050701 -36233611 + polypyrimidine Low_complexity Low_complexity 2 38 0 7 1226 214 366 83 50 chr13 84051993 84052174 -36232138 + B4A SINE B4 9 195 -97 7 1226 643 226 90 0 chr13 84052422 84052555 -36231757 - B1_Mus2 SINE Alu 0 147 3 7 1226 360 296 46 46 chr13 84052555 84052587 -36231725 - MT2B LTR ERVL -436 165 134 7 1226 1729 184 111 24 chr13 84052610 84052988 -36231324 + MTD LTR MaLR 1 411 -8 7 1226 376 341 201 0 chr13 84054316 84054545 -36229767 + LFSINE_Vert SINE SINE 183 457 -2 7 1226 313 231 25 13 chr13 84054722 84054801 -36229511 + BC1_Mm scRNA scRNA 10 89 -63 7 1226 2837 171 64 35 chr13 84055950 84056594 -36227718 - L1_Mur2 LINE L1 -5803 909 177 7 1226 228 255 26 65 chr13 84056763 84056918 -36227394 + Lx9 LINE L1 5942 6090 -1554 7 1226 2679 215 80 14 chr13 84056974 84057484 -36226828 + Lx9 LINE L1 6280 6826 -818 7 1226 3418 123 38 7 chr13 84057484 84058031 -36226281 - LTRIS2 LTR ERV1 0 564 1 7 1226 2679 215 80 14 chr13 84058031 84058224 -36226088 + Lx9 LINE L1 6827 7029 -615 7 1226 3172 193 16 39 chr13 84058285 84058901 -36225411 + RMER20B LTR ERVK 1 602 -25 8 1226 282 338 25 68 chr13 84058954 84059116 -36225196 - MLT1I LTR MaLR -248 163 9 8 1226 6279 61 12 1 chr13 84059151 84059950 -36224362 + L1_Mus2 LINE L1 5759 6566 0 8 1226 4419 191 25 29 chr13 84060110 84060659 -36223653 + L1_Mur3 LINE L1 2385 2928 -2952 8 1226 3509 20 2 0 chr13 84060659 84061054 -36223258 + MTA_Mm LTR MaLR 1 396 0 8 1226 4419 191 25 29 chr13 84061054 84061362 -36222950 + L1_Mur3 LINE L1 2929 3225 -2655 8 1226 225 0 0 0 chr13 84061362 84061387 -36222925 + (GA)n Simple_repeat Simple_repeat 2 26 0 8 1226 4419 191 25 29 chr13 84061387 84061651 -36222661 + L1_Mur3 LINE L1 3226 3503 -2377 8 1226 3893 109 47 18 chr13 84061655 84062278 -36222034 - L1_Mus3 LINE L1 0 6638 5998 8 1226 9002 89 2 40 chr13 84062282 84064472 -36219840 - L1Md_F2 LINE L1 0 6582 4478 8 1226 2016 168 128 4 chr13 84064472 84064927 -36219385 + L1_Mur3 LINE L1 3509 4019 -1861 8 1226 510 317 81 28 chr13 84065064 84065275 -36219037 + MLT1A0 LTR MaLR 144 365 0 8 1226 1543 198 5 65 chr13 84065378 84065745 -36218567 + L1VL1 LINE L1 194 538 -5884 8 1226 416 117 39 0 chr13 84065756 84065833 -36218479 + MusHAL1 LINE L1 767 846 -1866 9 1226 5492 85 90 1 chr13 84065829 84066661 -36217651 + L1_Mus3 LINE L1 5725 6630 -8 9 1226 3530 155 23 13 chr13 84067451 84068053 -36216259 + Lx4A LINE L1 6448 7055 -3 9 1226 207 0 0 0 chr13 84068053 84068076 -36216236 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 9 1226 439 312 40 0 chr13 84068842 84068967 -36215345 - B1_Mur1 SINE Alu -10 139 10 9 1226 234 174 0 0 chr13 84069159 84069205 -36215107 + GA-rich Low_complexity Low_complexity 1 46 0 9 1226 435 38 0 0 chr13 84069990 84070043 -36214269 + (TC)n Simple_repeat Simple_repeat 2 54 0 9 1226 479 277 0 0 chr13 84071804 84071898 -36212414 - PB1D10 SINE Alu -7 110 17 9 1226 350 298 32 0 chr13 84071819 84071913 -36212399 - ID_B1 SINE B4 -48 176 80 9 1226 263 250 16 0 chr13 84072166 84072230 -36212082 + B4A SINE B4 81 145 -147 9 1226 443 243 39 0 chr13 84072179 84072282 -36212030 + PB1D10 SINE Alu 9 115 -2 1 1226 2423 92 103 21 chr13 84072320 84072698 -36211614 - RLTR9E LTR ERVK 0 409 1 1 1226 252 149 0 0 chr13 84072904 84072951 -36211361 + (TTG)n Simple_repeat Simple_repeat 2 48 0 1 1226 322 322 55 97 chr13 84072955 84073120 -36211192 - RSINE1 SINE B4 -3 162 5 1 1226 226 280 89 51 chr13 84073997 84074076 -36210236 + RSINE1 SINE B4 54 135 -30 1 1226 252 86 0 0 chr13 84074125 84074160 -36210152 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1 1226 247 227 14 43 chr13 84074831 84074900 -36209412 - LTR16A LTR ERVL -81 370 304 1 1226 21 0 0 0 chr13 84075017 84075038 -36209274 + AT_rich Low_complexity Low_complexity 1 21 0 1 1226 6997 78 17 5 chr13 84075394 84076358 -36207954 + RLTR13D5 LTR ERVK 1 975 -48 1 1226 899 286 55 29 chr13 84076498 84076844 -36207468 - ORR1E LTR MaLR -3 356 2 1 1226 1059 73 0 0 chr13 84076963 84077113 -36207199 + (CA)n Simple_repeat Simple_repeat 2 151 0 1 1226 978 111 0 0 chr13 84077218 84077353 -36206959 + B1_Mm SINE Alu 13 147 0 1 1226 208 70 0 44 chr13 84077360 84077405 -36206907 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1226 1195 180 0 86 chr13 84077421 84077688 -36206624 + L1VL1 LINE L1 204 447 -5975 1 1226 13163 105 8 3 chr13 84077686 84080367 -36203945 + L1_Mus3 LINE L1 3871 6567 -71 1 1226 429 292 48 0 chr13 84081840 84081987 -36202325 + MLT2F LTR ERVL 4 157 -506 1 1226 274 266 20 76 chr13 84082035 84082178 -36202134 + MLT1E LTR MaLR 172 307 -347 1 1226 4584 134 45 7 chr13 84082178 84082936 -36201376 + Lx4B LINE L1 6255 7041 -17 1 1226 259 313 16 109 chr13 84082936 84082975 -36201337 + MLT1E LTR MaLR 308 337 -317 1 1226 542 344 71 27 chr13 84082947 84083091 -36201221 + MLT2F LTR ERVL 213 371 -292 1 1226 2173 146 96 5 chr13 84083091 84083477 -36200835 + MTC LTR MaLR 1 421 0 1 1226 542 344 71 27 chr13 84083477 84083556 -36200756 + MLT2F LTR ERVL 372 446 -217 1 1226 392 287 92 73 chr13 84087496 84087588 -36196724 - ID_B1 SINE B4 -1 223 129 1 1226 1079 16 8 0 chr13 84087588 84087717 -36196595 + (TTTC)n Simple_repeat Simple_repeat 3 132 0 1 1226 392 287 92 73 chr13 84087717 84087842 -36196470 - ID_B1 SINE B4 -96 128 2 1 1226 383 186 91 0 chr13 84088035 84088123 -36196189 + B1F SINE Alu 54 149 0 1 1226 23 0 0 0 chr13 84088414 84088437 -36195875 + AT_rich Low_complexity Low_complexity 1 23 0 1 1226 302 273 52 0 chr13 84088537 84088614 -36195698 - B1F1 SINE Alu -63 86 6 1 1226 963 313 25 32 chr13 84089005 84089444 -36194868 + Lx8 LINE L1 7001 7436 -37 1 1226 370 299 19 9 chr13 84089490 84089598 -36194714 + B4A SINE B4 168 276 -16 1 1226 678 327 33 34 chr13 84089667 84090016 -36194296 + B4 SINE B4 27 233 -59 1 1226 261 152 43 145 chr13 84089954 84090023 -36194289 + PB1D7 SINE Alu 59 120 0 1 1226 480 263 6 19 chr13 84090053 84090212 -36194100 + Lx7 LINE L1 7254 7410 -286 1 1226 252 77 0 0 chr13 84090218 84090257 -36194055 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1226 379 274 45 22 chr13 84090269 84090448 -36193864 + Lx7 LINE L1 7511 7693 -3 1 1226 25 0 0 0 chr13 84090555 84090580 -36193732 + AT_rich Low_complexity Low_complexity 1 25 0 1 1226 1570 219 22 3 chr13 84090580 84090696 -36193616 - Lx9 LINE L1 -15 7629 7515 1 1226 201 74 0 0 chr13 84090696 84090723 -36193589 + (TGG)n Simple_repeat Simple_repeat 1 27 0 1 1226 1570 219 22 3 chr13 84090723 84090972 -36193340 - Lx9 LINE L1 -130 7514 7258 1 1226 2174 217 15 0 chr13 84090970 84091440 -36192872 + Lx9 LINE L1 6759 7235 -409 1 1226 676 213 166 7 chr13 84091656 84091807 -36192505 + B3 SINE B2 39 213 -3 1 1226 1439 322 85 13 chr13 84092164 84092693 -36191619 + LTR16D2 LTR ERVL 6 572 0 1 1226 248 382 32 38 chr13 84092984 84093169 -36191143 - MIRb SINE MIR -43 225 42 1 1226 565 266 140 73 chr13 84094458 84094730 -36189582 + B4A SINE B4 1 290 -2 1 1226 294 272 49 0 chr13 84095728 84095809 -36188503 + ORR1E LTR MaLR 269 353 -6 1 1226 337 73 0 18 chr13 84096073 84096129 -36188183 - Lx LINE L1 -20 6634 6580 1 1226 262 107 18 18 chr13 84096183 84096240 -36188072 + (TAA)n Simple_repeat Simple_repeat 2 58 0 1 1226 1175 82 0 0 chr13 84096259 84096406 -36187906 - B1_Mus1 SINE Alu 0 148 2 1 1226 7024 86 12 4 chr13 84096421 84097427 -36186885 - L1_Mus4 LINE L1 -4 6632 5619 1 1226 16365 174 27 17 chr13 84097408 84097648 -36186664 - L1VL4 LINE L1 -1074 4812 4583 1 1226 1676 72 0 5 chr13 84097648 84097872 -36186440 - L1Md_F2 LINE L1 -4 6578 6356 1 1226 16365 177 31 22 chr13 84097872 84101858 -36182454 - L1VL4 LINE L1 -1304 4582 552 1 1226 27 29 0 0 chr13 84102193 84102227 -36182085 + AT_rich Low_complexity Low_complexity 1 34 0 1 1226 1628 249 31 125 chr13 84102274 84102478 -36181834 - RLTR16 LTR ERVK 0 505 323 1 1226 5250 38 14 0 chr13 84102478 84103111 -36181201 + L1Md_F2 LINE L1 5925 6566 -16 1 1226 1628 249 31 125 chr13 84103111 84103458 -36180854 - RLTR16 LTR ERVK -183 322 6 1 1226 3935 160 77 13 chr13 84103464 84104383 -36179929 - MYSERV16_I-int LTR ERVK -2 2324 1347 1 1226 1191 102 0 6 chr13 84104383 84104550 -36179762 - B2_Mm2 SINE B2 -27 168 3 1 1226 714 201 43 0 chr13 84104550 84104668 -36179644 - B2_Mm2 SINE B2 -68 127 4 1 1226 1757 85 27 3 chr13 84104668 84104962 -36179350 - MYSERV16_I-int LTR ERVK -970 1356 1056 1 1226 2188 190 121 39 chr13 84104949 84105546 -36178766 - MYSERV16_I-int LTR ERVK -1396 930 285 1 1226 866 213 14 61 chr13 84105563 84105843 -36178469 - RMER3D-int LTR ERVK -1464 1378 1112 1 1226 457 274 37 62 chr13 84106315 84106556 -36177756 - RMER3D-int LTR ERVK -2506 336 102 1 1226 342 0 0 0 chr13 84106612 84106650 -36177662 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1226 862 295 70 25 chr13 84106713 84106998 -36177314 + RLTR16 LTR ERVK 208 505 0 1 1226 740 252 33 0 chr13 84106998 84107149 -36177163 - B3A SINE B2 -32 166 11 1 1226 738 23 0 0 chr13 84107154 84107242 -36177070 + (TTCC)n Simple_repeat Simple_repeat 2 89 0 1 1226 333 331 125 6 chr13 84108036 84108212 -36176100 + L2 LINE L2 1491 1687 -1732 1 1226 399 83 0 0 chr13 84108336 84108396 -36175916 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1226 1436 274 57 25 chr13 84108526 84109051 -36175261 - Lx6 LINE L1 -26 7434 6515 1 1226 1354 259 130 10 chr13 84109070 84109585 -36174727 - Lx6 LINE L1 -693 6357 5781 1 1226 6936 118 35 46 chr13 84109578 84111348 -36172964 - L1Md_F3 LINE L1 -2 6582 4786 1 1226 705 171 12 0 chr13 84111417 84111546 -36172766 - B1_Mus1 SINE Alu 0 147 9 1 1226 725 267 71 5 chr13 84111583 84111779 -36172533 + B3 SINE B2 1 209 -7 1 1226 620 241 8 0 chr13 84111807 84111940 -36172372 + B1_Mur1 SINE Alu 2 135 -14 1 1226 602 304 41 5 chr13 84112003 84112221 -36172091 + Lx8 LINE L1 6916 7141 -332 1 1226 2798 316 50 15 chr13 84112586 84113576 -36170736 + Lx8 LINE L1 6341 7365 -108 1 1226 21 0 0 0 chr13 84113626 84113647 -36170665 + AT_rich Low_complexity Low_complexity 1 21 0 1 1226 275 212 12 0 chr13 84113647 84113732 -36170580 + (CA)n Simple_repeat Simple_repeat 2 87 0 1 1226 5091 58 2 2 chr13 84115222 84115865 -36168447 - L1_Mus1 LINE L1 -1 6566 5924 1 1226 768 263 75 0 chr13 84116399 84116585 -36167727 - B3 SINE B2 -16 200 1 1 1226 269 269 35 12 chr13 84116996 84117165 -36167147 + (TA)n Simple_repeat Simple_repeat 2 174 0 1 1226 442 266 53 160 chr13 84117303 84117603 -36166709 - RMER20B LTR ERVK -147 480 213 1 1226 209 215 0 15 chr13 84118868 84118926 -36165386 + CT-rich Low_complexity Low_complexity 9 65 0 1 1226 231 88 0 0 chr13 84118926 84118960 -36165352 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1 1226 1382 226 101 46 chr13 84120034 84120470 -36163842 + Lx9 LINE L1 6959 7418 -226 1 1226 561 30 0 0 chr13 84120473 84120540 -36163772 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1226 3054 133 67 18 chr13 84120541 84121052 -36163260 + Lx4A LINE L1 6523 7058 0 1 1226 34 55 0 0 chr13 84121052 84121107 -36163205 + AT_rich Low_complexity Low_complexity 1 55 0 1 1226 494 321 48 20 chr13 84122048 84122264 -36162048 - B3A SINE B2 -9 207 5 1 1226 306 0 19 58 chr13 84122325 84122377 -36161935 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 1 1226 261 0 0 0 chr13 84122533 84122562 -36161750 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1 1226 243 0 0 0 chr13 84129377 84129404 -36154908 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1226 277 191 0 0 chr13 84129694 84129741 -36154571 + ID_B1 SINE B4 105 151 -73 1 1226 221 281 11 43 chr13 84129748 84129841 -36154471 + A-rich Low_complexity Low_complexity 4 93 0 1 1226 253 158 0 0 chr13 84131552 84131590 -36152722 - ORR1D2 LTR MaLR -332 38 1 1 1226 275 299 123 31 chr13 84131599 84131761 -36152551 - L2 LINE L2 -495 2924 2748 1 1226 349 363 62 0 chr13 84131787 84131966 -36152346 + MamRep4096 DNA hAT? 233 422 -4 1 1226 358 299 8 41 chr13 84133226 84133348 -36150964 + PB1D7 SINE Alu 3 120 0 1 1226 297 0 0 0 chr13 84133421 84133454 -36150858 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1226 257 275 55 9 chr13 84133660 84133770 -36150542 + Tigger5 DNA MER2_type 2292 2406 0 1 1226 494 250 54 54 chr13 84133953 84134101 -36150211 + RSINE1 SINE B4 8 155 -10 1 1226 527 78 13 0 chr13 84134105 84134182 -36150130 + (CA)n Simple_repeat Simple_repeat 1 78 0 1 1226 1274 42 0 12 chr13 84134308 84134478 -36149834 + (GGGAGA)n Simple_repeat Simple_repeat 6 173 0 1 1226 268 303 147 29 chr13 84134653 84134857 -36149455 - L2 LINE L2 -913 2506 2279 1 1226 487 310 76 0 chr13 84135372 84135472 -36148840 + B4A SINE B4 1 100 -192 1 1226 225 0 0 0 chr13 84135472 84135497 -36148815 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1226 487 310 76 0 chr13 84135497 84135541 -36148771 + B4A SINE B4 101 155 -137 1 1226 222 37 0 0 chr13 84135597 84135624 -36148688 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1 1226 925 158 6 6 chr13 84135626 84135804 -36148508 + GA-rich Low_complexity Low_complexity 3 180 0 1 1226 252 0 0 0 chr13 84135809 84135837 -36148475 + (GAAA)n Simple_repeat Simple_repeat 1 28 0 1 1226 856 178 0 11 chr13 84135837 84136010 -36148302 + GA-rich Low_complexity Low_complexity 9 180 0 1 1226 41 48 0 0 chr13 84138545 84138607 -36145705 + AT_rich Low_complexity Low_complexity 1 62 0 1 1226 2278 109 15 6 chr13 84138996 84139336 -36144976 - L1_Mus3 LINE L1 -6 6630 6288 1 1226 2896 76 66 0 chr13 84139315 84139723 -36144589 - L1_Mus3 LINE L1 -466 6172 5738 1 1226 338 286 122 38 chr13 84139855 84139889 -36144423 + B4 SINE B4 52 96 -196 1 1226 528 208 65 9 chr13 84139889 84139996 -36144316 + B1_Mur1 SINE Alu 1 113 -36 1 1226 343 276 8 79 chr13 84139903 84140029 -36144283 + MT2B LTR ERVL 179 295 -306 2 1226 299 270 0 39 chr13 84139984 84140061 -36144251 + PB1D10 SINE Alu 43 116 -1 2 1226 4573 98 44 4 chr13 84140401 84141088 -36143224 + L1_Mus4 LINE L1 5923 6636 0 2 1226 23 54 0 0 chr13 84141174 84141211 -36143101 + AT_rich Low_complexity Low_complexity 1 37 0 2 1226 624 278 39 22 chr13 84141348 84141528 -36142784 + B3A SINE B2 1 183 -15 2 1226 692 312 5 24 chr13 84141967 84142177 -36142135 + ORR1D2 LTR MaLR 20 225 -145 2 1226 1020 267 78 120 chr13 84142177 84142535 -36141777 + Lx6 LINE L1 6842 7184 -276 2 1226 1113 101 0 0 chr13 84142534 84142692 -36141620 - L1_Mm LINE L1 -603 5280 5123 2 1226 2415 61 27 9 chr13 84142694 84143025 -36141287 + L1Md_F2 LINE L1 6234 6570 -12 2 1226 198 0 0 0 chr13 84143048 84143070 -36141242 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1226 225 257 92 26 chr13 84143242 84143318 -36140994 - ID4_ SINE ID -2 81 1 2 1226 759 195 263 10 chr13 84144725 84145027 -36139285 - RMER4B LTR ERVK -11 574 196 2 1226 1003 126 75 0 chr13 84145028 84145187 -36139125 + Lx3B LINE L1 5645 5815 -1158 2 1226 189 154 0 0 chr13 84145665 84145704 -36138608 + (TG)n Simple_repeat Simple_repeat 1 39 0 2 1226 1745 123 52 29 chr13 84146431 84146740 -36137572 - Lx LINE L1 -5 6649 6334 2 1226 5394 108 4 1 chr13 84146740 84147535 -36136777 + Lx LINE L1 5541 6345 -309 2 1226 183 318 22 56 chr13 84147558 84147648 -36136664 + MIRc SINE MIR 127 213 -55 2 153 1552 48 81 9 chr13 84148115 84148326 -36135986 + L1_Mus1 LINE L1 6342 6567 0 2 1227 329 319 64 64 chr13 84149742 84149946 -36134366 + Charlie26a DNA MER1_type 90 293 -32 2 1227 225 155 138 0 chr13 84150537 84150595 -36133717 + L1_Mur2 LINE L1 206 271 -6441 2 1227 3113 146 18 8 chr13 84150585 84151076 -36133236 + Lx4A LINE L1 6499 6994 -64 2 1227 195 42 0 0 chr13 84151100 84151124 -36133188 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 2 1227 221 359 4 134 chr13 84151300 84151538 -36132774 + L2c LINE L2 3141 3347 -40 2 1227 319 294 126 38 chr13 84151794 84152056 -36132256 - Lx9 LINE L1 -40 7604 7320 2 1227 209 83 0 27 chr13 84153868 84153905 -36130407 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1227 217 156 0 22 chr13 84153905 84153951 -36130361 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1227 2262 72 120 11 chr13 84153962 84154311 -36130001 + RLTR10 LTR ERVK 4 390 0 2 1227 441 314 58 0 chr13 84154315 84154452 -36129860 - B3 SINE B2 -13 203 59 2 1227 432 0 0 0 chr13 84154453 84154501 -36129811 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 1227 252 0 0 0 chr13 84154501 84154528 -36129784 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1227 340 351 6 62 chr13 84154580 84154756 -36129556 - B4A SINE B4 0 292 127 2 1227 416 232 155 9 chr13 84154874 84155034 -36129278 - MLT1E2 LTR MaLR -440 187 7 2 1227 226 333 0 0 chr13 84156459 84156525 -36127787 + PB1D10 SINE Alu 1 66 -51 2 1227 293 347 51 0 chr13 84156558 84156656 -36127656 + ID_B1 SINE B4 70 172 -52 2 1227 409 300 11 0 chr13 84156575 84156665 -36127647 + PB1D10 SINE Alu 10 100 -17 2 1227 360 281 149 8 chr13 84157098 84157346 -36126966 + MER2 DNA MER2_type 1 283 -62 2 1227 24 0 0 0 chr13 84157495 84157519 -36126793 + AT_rich Low_complexity Low_complexity 1 24 0 2 1227 351 375 70 24 chr13 84157649 84157936 -36126376 - HAL1 LINE L1 -1619 888 589 2 1227 275 270 0 0 chr13 84158060 84158123 -36126189 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 1227 227 116 163 0 chr13 84158482 84158525 -36125787 + B2_Mm2 SINE B2 1 50 -145 2 1227 294 258 32 0 chr13 84159566 84159659 -36124653 + (TA)n Simple_repeat Simple_repeat 1 96 0 2 1227 578 326 74 7 chr13 84159686 84159955 -36124357 - Lx9 LINE L1 -160 7484 7198 2 1227 732 305 119 16 chr13 84160025 84160335 -36123977 - Lx9 LINE L1 -880 6764 6423 2 1227 3453 56 11 13 chr13 84161980 84162431 -36121881 + L1_Mus1 LINE L1 6118 6567 0 2 1227 945 311 38 34 chr13 84162518 84162838 -36121474 + MLT1A0 LTR MaLR 34 354 -11 2 1227 225 0 0 0 chr13 84163050 84163075 -36121237 + (TATAA)n Simple_repeat Simple_repeat 3 27 0 2 1227 23 0 0 0 chr13 84164486 84164509 -36119803 + AT_rich Low_complexity Low_complexity 1 23 0 2 1227 595 283 119 0 chr13 84165767 84166018 -36118294 - Lx8 LINE L1 -5 7468 7188 2 1227 396 0 0 0 chr13 84166204 84166248 -36118064 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1227 318 348 0 51 chr13 84166254 84166372 -36117940 + PB1D7 SINE Alu 6 117 -3 2 1227 15826 20 0 0 chr13 84166637 84168474 -36115838 + L1Md_T LINE L1 3750 5586 -297 2 1227 8441 32 0 0 chr13 84168474 84169470 -36114842 + L1Md_T LINE L1 5587 6582 0 2 1227 218 333 21 105 chr13 84169732 84169923 -36114389 + MIRb SINE MIR 64 238 -30 2 1227 740 312 22 9 chr13 84170052 84170372 -36113940 + L1MA6 LINE L1 5950 6273 -27 2 1227 220 250 68 81 chr13 84170491 84170565 -36113747 + L2c LINE L2 3273 3345 -42 2 1227 324 0 0 0 chr13 84170607 84170643 -36113669 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1227 293 302 37 85 chr13 84170975 84171163 -36113149 + B3A SINE B2 4 182 -16 2 1227 439 283 0 0 chr13 84172047 84172139 -36112173 + RSINE1 SINE B4 2 93 -72 2 1227 209 229 97 16 chr13 84172257 84172319 -36111993 - MIR SINE MIR -176 86 20 2 1227 1250 60 0 6 chr13 84172983 84173150 -36111162 + L1_Mus1 LINE L1 6401 6566 -1 2 1227 16047 135 20 15 chr13 84173185 84173623 -36110689 + L1_Mm LINE L1 2420 2866 -3017 2 1227 213 39 0 0 chr13 84173623 84173649 -36110663 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 2 1227 16047 135 20 15 chr13 84173649 84175949 -36108363 + L1_Mm LINE L1 2867 5169 -714 2 1227 347 286 11 42 chr13 84175953 84176027 -36108285 + B3 SINE B2 72 146 -70 2 1227 1182 112 0 0 chr13 84176027 84176205 -36108107 + (CA)n Simple_repeat Simple_repeat 1 178 0 2 1227 347 286 11 42 chr13 84176205 84176225 -36108087 + B3 SINE B2 147 163 -53 2 1227 648 0 0 0 chr13 84176782 84176854 -36107458 + (TC)n Simple_repeat Simple_repeat 1 72 0 2 1227 747 33 0 0 chr13 84176854 84176943 -36107369 + (CA)n Simple_repeat Simple_repeat 1 90 0 2 1227 563 267 152 10 chr13 84177041 84177238 -36107074 - B4A SINE B4 -66 226 2 2 1227 722 269 114 40 chr13 84178098 84178450 -36105862 - MER113 DNA MER1_type -41 480 103 2 1227 381 238 133 127 chr13 84179013 84179186 -36105126 + B3 SINE B2 37 210 -6 2 1227 1192 29 0 0 chr13 84179367 84179505 -36104807 - L1Md_F3 LINE L1 -458 6126 5989 2 1227 1019 30 0 15 chr13 84179505 84179640 -36104672 + L1Md_F3 LINE L1 6438 6570 -14 2 1227 848 275 46 8 chr13 84180206 84180444 -36103868 + Lx8 LINE L1 6341 6587 -886 2 1227 405 0 0 0 chr13 84180444 84180489 -36103823 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1227 212 233 0 0 chr13 84180498 84180541 -36103771 + MIR SINE MIR 106 148 -114 2 1227 703 280 26 26 chr13 84180547 84180741 -36103571 + Lx8 LINE L1 6964 7157 -316 2 1227 460 300 100 0 chr13 84180747 84180857 -36103455 + B3A SINE B2 39 159 -39 2 1227 752 278 25 101 chr13 84180942 84181298 -36103014 + Lx8 LINE L1 7135 7463 -10 2 1227 180 0 0 0 chr13 84181549 84181569 -36102743 + (TC)n Simple_repeat Simple_repeat 2 21 0 2 1227 450 127 0 0 chr13 84181569 84181639 -36102673 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1227 592 161 28 0 chr13 84181671 84181802 -36102510 + (TATATG)n Simple_repeat Simple_repeat 2 136 0 2 1227 288 0 0 0 chr13 84181802 84181834 -36102478 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1227 592 161 28 0 chr13 84181834 84181845 -36102467 + (TATATG)n Simple_repeat Simple_repeat 3 13 0 2 1227 206 328 120 55 chr13 84182091 84182291 -36102021 + MIRb SINE MIR 48 260 -8 2 1227 3573 2 0 7 chr13 84182510 84182915 -36101397 - L1Md_T LINE L1 0 6582 6181 2 1227 2283 0 0 0 chr13 84182915 84183171 -36101141 + L1Md_T LINE L1 5771 6026 -556 2 1227 206 32 32 0 chr13 84183479 84183510 -36100802 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2 1227 405 0 0 0 chr13 84184019 84184064 -36100248 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1227 551 303 21 0 chr13 84184098 84184243 -36100069 - RSINE1 SINE B4 -16 149 2 2 1227 33 43 0 0 chr13 84184363 84184410 -36099902 + AT_rich Low_complexity Low_complexity 1 47 0 2 1227 216 116 70 0 chr13 84184917 84184960 -36099352 + A-rich Low_complexity Low_complexity 1 46 0 2 1227 378 57 0 0 chr13 84186313 84186366 -36097946 + (CAGAGA)n Simple_repeat Simple_repeat 2 54 0 2 1227 243 88 0 0 chr13 84187298 84187332 -36096980 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 1227 210 143 0 0 chr13 84188324 84188359 -36095953 + (ACTG)n Simple_repeat Simple_repeat 1 35 0 2 1227 708 311 80 12 chr13 84188434 84188685 -36095627 - MTD LTR MaLR -85 334 67 2 1227 21 57 0 0 chr13 84188899 84188934 -36095378 + AT_rich Low_complexity Low_complexity 1 35 0 2 1227 264 282 92 0 chr13 84189128 84189259 -36095053 - L1MA10 LINE L1 -14 6320 6178 2 1227 23 0 0 0 chr13 84189858 84189881 -36094431 + AT_rich Low_complexity Low_complexity 1 23 0 2 1227 330 26 0 0 chr13 84192189 84192228 -36092084 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1227 501 62 0 0 chr13 84195070 84195135 -36089177 + (TC)n Simple_repeat Simple_repeat 2 66 0 2 1227 180 0 0 0 chr13 84195349 84195369 -36088943 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 2 1227 189 0 0 0 chr13 84195527 84195548 -36088764 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1227 218 182 0 0 chr13 84196086 84196130 -36088182 + C-rich Low_complexity Low_complexity 1 44 0 2 1227 234 0 0 0 chr13 84196327 84196353 -36087959 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1227 21 0 0 0 chr13 84197054 84197075 -36087237 + AT_rich Low_complexity Low_complexity 1 21 0 2 1227 32 0 0 0 chr13 84197499 84197531 -36086781 + AT_rich Low_complexity Low_complexity 1 32 0 2 1227 297 0 0 0 chr13 84198911 84198944 -36085368 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1227 209 171 0 0 chr13 84199779 84199814 -36084498 + C-rich Low_complexity Low_complexity 5 39 0 3 1227 186 43 0 0 chr13 84201290 84201313 -36082999 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 3 1227 306 0 0 0 chr13 84202678 84202712 -36081600 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1227 183 129 0 0 chr13 84202825 84202856 -36081456 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1227 375 23 0 0 chr13 84203113 84203157 -36081155 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1227 636 14 0 0 chr13 84203901 84203974 -36080338 + (TC)n Simple_repeat Simple_repeat 2 74 0 3 1227 22 0 0 0 chr13 84205035 84205057 -36079255 + AT_rich Low_complexity Low_complexity 1 22 0 3 1227 224 327 0 130 chr13 84205536 84205659 -36078653 - L2c LINE L2 -9 3378 3272 3 1227 189 235 107 36 chr13 84205905 84205989 -36078323 + MIRb SINE MIR 162 251 -17 3 1227 193 275 68 68 chr13 84206923 84206997 -36077315 - L4 LINE RTE -1336 693 620 3 1227 736 239 109 5 chr13 84208732 84208934 -36075378 - ID_B1 SINE B4 0 224 2 3 1227 1078 299 28 80 chr13 84209098 84209599 -36074713 + Lx9 LINE L1 6957 7431 -213 3 1227 60 53 0 0 chr13 84209848 84209943 -36074369 + AT_rich Low_complexity Low_complexity 1 95 0 3 1227 387 0 0 0 chr13 84209943 84209986 -36074326 + (GAAA)n Simple_repeat Simple_repeat 4 46 0 3 1227 1115 70 0 27 chr13 84209995 84210142 -36074170 + B1_Mus2 SINE Alu 1 143 -4 3 1227 198 0 0 0 chr13 84210143 84210165 -36074147 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 3 1227 342 293 72 44 chr13 84210336 84210586 -36073726 - L1MA6 LINE L1 0 6300 6044 3 1227 3358 244 60 19 chr13 84210628 84211536 -36072776 + Lx2B LINE L1 6046 6990 -10 3 1227 603 299 5 36 chr13 84211552 84211774 -36072538 + L1MA6 LINE L1 5872 6086 -214 3 1227 198 0 0 0 chr13 84211782 84211804 -36072508 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 3 1227 674 292 127 9 chr13 84211813 84212151 -36072161 - L1MA6 LINE L1 -576 5724 5347 3 1227 460 193 174 0 chr13 84212654 84212763 -36071549 + MTC LTR MaLR 14 141 -278 3 1227 1552 249 157 26 chr13 84212785 84213154 -36071158 + RLTR20D LTR ERVK 51 477 -91 3 1227 450 0 0 0 chr13 84213154 84213204 -36071108 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1227 1552 249 157 26 chr13 84213204 84213292 -36071020 + RLTR20D LTR ERVK 478 567 -1 3 1227 1147 238 47 18 chr13 84213292 84213570 -36070742 + MTC LTR MaLR 136 421 0 3 1227 228 309 86 76 chr13 84215847 84215952 -36068360 + L2 LINE L2 22 127 -3292 3 1227 1496 258 16 32 chr13 84216667 84216814 -36067498 + ORR1D2 LTR MaLR 2 148 -222 3 1227 234 0 0 0 chr13 84216814 84216840 -36067472 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1227 1496 258 16 32 chr13 84216840 84217061 -36067251 + ORR1D2 LTR MaLR 149 364 -6 3 1227 481 327 76 20 chr13 84217059 84217304 -36067008 + MLT1E2 LTR MaLR 23 281 -346 3 1227 558 43 0 0 chr13 84217304 84217373 -36066939 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1227 438 276 67 7 chr13 84217388 84217523 -36066789 + MLT1E2 LTR MaLR 363 505 0 3 1227 21 36 0 0 chr13 84217627 84217655 -36066657 + AT_rich Low_complexity Low_complexity 1 28 0 3 1227 942 96 0 0 chr13 84217703 84217838 -36066474 + (GGAGA)n Simple_repeat Simple_repeat 2 136 0 3 1227 4650 213 43 22 chr13 84219108 84220163 -36064149 - Lx7 LINE L1 -1033 6663 5587 3 1227 4423 186 58 99 chr13 84220176 84222027 -36062285 - L1_Mur3 LINE L1 -3647 2233 472 3 1227 249 0 0 68 chr13 84222027 84222071 -36062241 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 1227 4423 220 52 80 chr13 84222071 84222502 -36061810 - L1_Mur3 LINE L1 -7257 471 55 3 1227 474 198 0 0 chr13 84222545 84222702 -36061610 + (CA)n Simple_repeat Simple_repeat 2 158 0 3 1227 198 219 0 0 chr13 84222735 84222799 -36061513 + (CA)n Simple_repeat Simple_repeat 2 65 0 3 1227 808 314 17 45 chr13 84222909 84223262 -36061050 - L1_Mur3 LINE L1 -55 5825 5483 3 1227 344 291 112 37 chr13 84223306 84223627 -36060685 + L1MA4 LINE L1 4899 5243 -900 3 1227 257 313 73 0 chr13 84223684 84223834 -36060478 + L1MA4 LINE L1 5263 5423 -751 3 1227 523 289 68 85 chr13 84224105 84224539 -36059773 + L1MA4 LINE L1 5626 6038 -262 3 1227 644 305 118 30 chr13 84225402 84225740 -36058572 - MARNA DNA Mariner -69 517 150 3 1227 463 245 94 0 chr13 84226100 84226206 -36058106 + B3A SINE B2 3 118 -80 3 1227 423 0 0 0 chr13 84226234 84226281 -36058031 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1227 578 79 30 38 chr13 84226588 84226719 -36057593 + (TAGA)n Simple_repeat Simple_repeat 3 132 0 3 1227 332 329 41 18 chr13 84227000 84227170 -36057142 + L1M3 LINE L1 5593 5766 -402 3 1227 429 314 0 19 chr13 84227173 84227280 -36057032 + RSINE1 SINE B4 53 157 -8 3 1227 405 220 59 20 chr13 84227341 84227443 -36056869 + PB1D10 SINE Alu 12 117 0 3 1227 22 35 0 0 chr13 84227888 84227917 -36056395 + AT_rich Low_complexity Low_complexity 1 29 0 3 1227 34056 91 6 7 chr13 84228047 84234147 -36050165 + L1_Mus1 LINE L1 422 6509 -58 3 1227 185 0 0 39 chr13 84234147 84234173 -36050139 + (TGGGGG)n Simple_repeat Simple_repeat 1 25 0 3 1227 7105 84 12 1 chr13 84234173 84234229 -36050083 + L1_Mus1 LINE L1 6510 6567 0 3 1227 26610 110 9 4 chr13 84234384 84239211 -36045101 + L1_Mus2 LINE L1 1704 6566 0 3 1227 2704 231 78 56 chr13 84239223 84240021 -36044291 - Lx9 LINE L1 -709 6935 6121 3 1227 316 286 0 13 chr13 84240023 84240101 -36044211 + Lx9 LINE L1 5871 5947 -1697 3 1227 180 273 0 0 chr13 84240549 84240582 -36043730 - MER5A DNA MER1_type -1 188 156 3 1227 288 286 112 0 chr13 84240597 84240695 -36043617 + MER5A DNA MER1_type 81 189 0 3 1227 457 282 47 105 chr13 84242536 84242574 -36041738 + ID_B1 SINE B4 44 143 -81 3 1227 636 236 19 83 chr13 84242574 84242635 -36041677 + B1_Mur1 SINE Alu 3 63 -86 3 1227 2465 167 72 20 chr13 84242635 84243136 -36041176 - RLTR11A2 LTR ERVK 0 527 1 3 1227 457 282 47 105 chr13 84243136 84243226 -36041086 + ID_B1 SINE B4 144 222 -2 3 1227 983 180 88 4 chr13 84243922 84244173 -36040139 + Lx9 LINE L1 7372 7643 -1 3 1227 924 166 27 16 chr13 84244288 84244472 -36039840 - B2_Mm2 SINE B2 -9 186 1 3 1227 24 32 0 0 chr13 84244787 84244818 -36039494 + AT_rich Low_complexity Low_complexity 1 31 0 3 1227 493 261 204 0 chr13 84245250 84245426 -36038886 - ORR1E LTR MaLR 0 370 159 3 1227 36766 26 1 7 chr13 84245426 84250429 -36033883 + L1Md_T LINE L1 624 5586 -297 3 1227 8309 36 0 0 chr13 84250429 84251423 -36032889 + L1Md_T LINE L1 5587 6580 -2 3 1227 758 310 0 11 chr13 84251457 84251643 -36032669 - ORR1E LTR MaLR -175 184 1 3 1227 542 260 124 0 chr13 84252469 84252646 -36031666 - B3 SINE B2 -16 200 2 3 1227 12581 22 0 0 chr13 84252758 84254230 -36030082 + L1Md_T LINE L1 4115 5586 -297 3 1227 8974 5 0 0 chr13 84254230 84255226 -36029086 + L1Md_T LINE L1 5587 6582 0 3 1227 249 33 0 0 chr13 84255395 84255425 -36028887 + (CCA)n Simple_repeat Simple_repeat 3 32 0 3 1227 292 214 220 22 chr13 84255475 84255566 -36028746 + PB1D10 SINE Alu 1 109 -8 3 1227 233 263 0 17 chr13 84255615 84255673 -36028639 + GA-rich Low_complexity Low_complexity 2 58 0 3 1227 345 178 84 0 chr13 84255737 84255823 -36028489 + B1_Mm SINE Alu 1 109 -39 3 1227 252 257 236 29 chr13 84255873 84256013 -36028299 + L1MC2 LINE L1 6163 6331 -13 3 1227 198 234 0 41 chr13 84257099 84257148 -36027164 + MIRm SINE MIR 115 161 -115 3 1227 444 272 191 0 chr13 84257770 84257906 -36026406 - RSINE1 SINE B4 0 165 4 3 1227 423 0 0 0 chr13 84257910 84257957 -36026355 + (TAG)n Simple_repeat Simple_repeat 1 47 0 3 1227 22 35 0 0 chr13 84258314 84258343 -36025969 + AT_rich Low_complexity Low_complexity 1 29 0 3 1227 421 270 33 127 chr13 84258413 84258613 -36025699 - ORR1E LTR MaLR -5 365 154 3 1227 2897 76 0 0 chr13 84258613 84258983 -36025329 - L1Md_F2 LINE L1 -391 6191 5822 3 1227 2239 110 0 42 chr13 84258983 84259344 -36024968 + L1Md_F2 LINE L1 6237 6582 0 3 1227 778 312 11 5 chr13 84259347 84259534 -36024778 - ORR1E LTR MaLR -168 191 4 3 1227 1414 210 126 116 chr13 84259564 84260114 -36024198 - RMER4B LTR ERVK -14 571 17 3 1227 3453 192 69 124 chr13 84260122 84260262 -36024050 - MYSERV6-int LTR ERVK 0 8959 8842 3 1227 441 0 0 0 chr13 84260262 84260311 -36024001 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 3 1227 3453 192 69 124 chr13 84260311 84261338 -36022974 - MYSERV6-int LTR ERVK -118 8841 7857 3 1227 349 263 13 0 chr13 84261612 84261688 -36022624 - ID4 SINE ID -3 80 4 3 1227 530 328 67 61 chr13 84262371 84262699 -36021613 + MER92B LTR ERV1 1 330 -306 3 1227 288 219 0 99 chr13 84263386 84263457 -36020855 - ID4 SINE ID -17 66 3 3 1227 198 0 0 0 chr13 84264224 84264246 -36020066 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 3 1227 379 359 0 8 chr13 84264792 84264910 -36019402 - PB1D10 SINE Alu 0 117 1 3 1227 21 0 0 0 chr13 84264929 84264950 -36019362 + AT_rich Low_complexity Low_complexity 1 21 0 3 1227 334 317 53 88 chr13 84264997 84265156 -36019156 + L1M2 LINE L1 2362 2512 -3631 3 1227 333 285 83 49 chr13 84265156 84265300 -36019012 + B1F1 SINE Alu 1 149 0 3 1227 334 317 53 88 chr13 84265300 84265368 -36018944 + L1M2 LINE L1 2513 2581 -3562 3 1227 237 333 13 0 chr13 84265817 84265895 -36018417 + ID4 SINE ID 3 81 -2 3 1227 290 280 13 0 chr13 84265895 84265970 -36018342 + GA-rich Low_complexity Low_complexity 1 76 0 3 1227 273 127 175 0 chr13 84266123 84266186 -36018126 + L1MA6 LINE L1 4148 4221 -1919 3 1227 228 242 168 59 chr13 84266230 84266331 -36017981 + L1_Mur3 LINE L1 4208 4319 -1561 3 1227 912 74 0 59 chr13 84266380 84266566 -36017746 + (GGGA)n Simple_repeat Simple_repeat 4 178 0 3 1227 910 304 85 62 chr13 84266614 84266847 -36017465 + L1MA6 LINE L1 4562 4812 -1331 3 1227 513 286 84 47 chr13 84266847 84267038 -36017274 + B3A SINE B2 1 198 0 3 1227 910 304 85 62 chr13 84267038 84267359 -36016953 + L1MA6 LINE L1 4813 5125 -1018 3 1227 515 288 36 16 chr13 84267359 84267553 -36016759 + B3A SINE B2 1 198 0 3 1227 910 266 89 58 chr13 84267553 84267907 -36016405 + L1MA6 LINE L1 5126 5490 -813 3 1227 855 111 0 8 chr13 84267908 84268035 -36016277 + B1_Mur4 SINE Alu 19 144 -6 3 1227 650 169 15 0 chr13 84268055 84268191 -36016121 + GA-rich Low_complexity Low_complexity 2 139 0 3 1227 629 319 50 36 chr13 84268245 84268687 -36015625 + L1MA6 LINE L1 5557 6004 -296 3 1227 1646 86 38 38 chr13 84269136 84269403 -36014909 + Lx3A LINE L1 6709 6975 -6 3 1227 23 78 0 0 chr13 84269405 84269456 -36014856 + AT_rich Low_complexity Low_complexity 1 51 0 3 1227 275 374 9 45 chr13 84270029 84270141 -36014171 - PB1D10 SINE Alu -9 108 1 3 1227 237 151 0 0 chr13 84271101 84271154 -36013158 + GA-rich Low_complexity Low_complexity 2 54 0 3 1227 618 336 65 45 chr13 84272238 84272593 -36011719 + MER74A LTR ERVL 12 373 -185 3 1227 368 339 57 41 chr13 84272784 84272907 -36011405 + ID_B1 SINE B4 67 191 -33 3 1227 251 336 62 80 chr13 84272808 84272921 -36011391 + PB1D10 SINE Alu 5 115 -2 3 1227 339 353 90 83 chr13 84273131 84273675 -36010637 + L1MDa LINE L1 109 656 -5977 3 1227 711 309 128 22 chr13 84273693 84274060 -36010252 + L1MDa LINE L1 781 1186 -5447 3 1227 436 231 83 108 chr13 84274063 84274290 -36010022 + L1MDa LINE L1 3321 3548 -2989 3 1227 7050 141 19 30 chr13 84274290 84275542 -36008770 + Lx2 LINE L1 5756 6993 -4 3 1227 436 234 432 47 chr13 84275542 84275766 -36008546 + L1MDa LINE L1 3549 3852 -2685 3 1227 291 383 33 16 chr13 84275770 84275892 -36008420 + MTE2a LTR MaLR 72 195 -184 4 1227 459 283 10 0 chr13 84275885 84275984 -36008328 + ID_B1 SINE B4 97 196 -28 4 1227 290 265 0 56 chr13 84276035 84276107 -36008205 + MTE2a LTR MaLR 186 253 -126 4 1227 726 198 118 40 chr13 84276263 84276466 -36007846 - ORR1C2 LTR MaLR 0 421 175 4 1227 1961 205 38 31 chr13 84276390 84276846 -36007466 + ORR1D1-int LTR MaLR 970 1527 -53 4 1227 799 226 300 47 chr13 84276846 84276991 -36007321 + ORR1D1 LTR MaLR 1 139 -235 4 1227 405 0 0 0 chr13 84276991 84277036 -36007276 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 1227 486 0 0 0 chr13 84277036 84277089 -36007223 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1227 799 226 300 47 chr13 84277089 84277239 -36007073 + ORR1D1 LTR MaLR 140 371 -3 4 1227 330 91 0 0 chr13 84277397 84277452 -36006860 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1227 1611 197 3 62 chr13 84277457 84277781 -36006531 + ORR1A4 LTR MaLR 17 321 -8 4 1227 519 17 0 0 chr13 84277798 84277858 -36006454 + (TG)n Simple_repeat Simple_repeat 2 61 0 4 1227 1629 320 44 47 chr13 84277858 84278304 -36006008 - Lx9 LINE L1 -228 7416 6990 4 1227 195 42 0 0 chr13 84278304 84278328 -36005984 + (ATG)n Simple_repeat Simple_repeat 2 25 0 4 1227 1629 320 44 47 chr13 84278328 84278718 -36005594 - Lx9 LINE L1 -655 6989 6582 4 1227 1020 32 0 0 chr13 84278742 84278867 -36005445 - B1_Mus1 SINE Alu 0 148 24 4 1227 387 296 3 3 chr13 84278868 84279004 -36005308 - Lx9 LINE L1 -1115 6529 6305 4 1227 414 0 0 0 chr13 84279004 84279050 -36005262 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 153 1236 284 61 38 chr13 84279059 84279763 -36004549 - Lx9 LINE L1 -1295 6178 5421 4 1228 379 280 160 11 chr13 84279763 84279951 -36004361 + L1M2 LINE L1 3617 3832 -2311 4 1228 385 291 46 7 chr13 84279952 84280104 -36004208 + L1_Mm LINE L1 4415 4572 -1311 4 1228 457 177 52 88 chr13 84280106 84280321 -36003991 + L1MD1 LINE L1 5217 5425 -817 4 1228 1036 89 0 20 chr13 84280891 84281040 -36003272 + B1_Mus1 SINE Alu 3 148 0 4 1228 458 114 0 12 chr13 84281127 84281207 -36003105 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 1228 553 324 59 30 chr13 84281207 84281407 -36002905 + L1MD1 LINE L1 5512 5713 -529 4 1228 1571 186 80 25 chr13 84281407 84281771 -36002541 + ORR1C2 LTR MaLR 1 384 0 4 1228 553 324 59 30 chr13 84281771 84281942 -36002370 + L1MD1 LINE L1 5714 5894 -348 4 1228 1216 284 77 11 chr13 84282601 84282964 -36001348 + MTD LTR MaLR 19 405 -14 4 1228 643 278 50 86 chr13 84282977 84283323 -36000989 + MTD-int LTR MaLR 1 396 -862 4 1228 22714 160 43 6 chr13 84283337 84285749 -35998563 + Lx LINE L1 565 3054 -2832 4 1228 615 39 0 0 chr13 84285749 84285827 -35998485 + (GAA)n Simple_repeat Simple_repeat 2 79 0 4 1228 22714 179 33 7 chr13 84285827 84287491 -35996821 + Lx LINE L1 3055 4766 -1120 4 1228 207 88 0 0 chr13 84287491 84287525 -35996787 + (AATAG)n Simple_repeat Simple_repeat 4 37 0 4 1228 22714 168 46 4 chr13 84287525 84289312 -35995000 + Lx LINE L1 4767 6646 -8 4 1228 297 51 0 0 chr13 84289324 84289363 -35994949 + (GA)n Simple_repeat Simple_repeat 1 39 0 4 1228 1688 247 188 18 chr13 84289390 84290049 -35994263 + MTD-int LTR MaLR 482 1252 -6 4 1228 392 308 82 71 chr13 84290066 84290236 -35994076 + MTD LTR MaLR 22 193 -226 4 1228 585 42 0 0 chr13 84290236 84290308 -35994004 + (TA)n Simple_repeat Simple_repeat 2 73 0 4 1228 392 291 139 109 chr13 84290308 84290403 -35993909 + MTD LTR MaLR 194 295 -126 4 1228 649 248 36 56 chr13 84291678 84291987 -35992325 + L1MA4 LINE L1 4840 5121 -1022 4 1228 285 267 15 15 chr13 84292060 84292193 -35992119 + (TTGG)n Simple_repeat Simple_repeat 3 135 0 4 1228 182 146 0 40 chr13 84292212 84292262 -35992050 + (TTGG)n Simple_repeat Simple_repeat 1 48 0 4 1228 301 252 194 0 chr13 84292337 84292440 -35991872 - L1MD LINE L1 -836 5310 5188 4 1228 381 301 43 75 chr13 84292724 84292871 -35991441 + L1MA4 LINE L1 5261 5411 -889 4 1228 1180 115 11 0 chr13 84292871 84293045 -35991267 - B2_Mm1t SINE B2 -17 176 1 4 1228 381 295 49 83 chr13 84293045 84293198 -35991114 + L1MA4 LINE L1 5409 5554 -746 4 1228 2324 226 70 83 chr13 84293204 84294057 -35990255 + RMER17B LTR ERVK 1 842 -116 4 1228 741 281 35 77 chr13 84294188 84294517 -35989795 + L1MA4 LINE L1 5587 5928 -372 4 1228 537 296 0 66 chr13 84294525 84294566 -35989746 + B3A SINE B2 1 38 -160 4 1228 3738 202 20 0 chr13 84294566 84295333 -35988979 + Lx3C LINE L1 6193 6974 -2 4 1228 537 296 3 77 chr13 84295333 84295465 -35988847 + B3A SINE B2 39 154 -41 4 1228 276 228 46 74 chr13 84295470 84295599 -35988713 + L1MA9 LINE L1 5540 5665 -635 4 1228 938 274 87 36 chr13 84295714 84296164 -35988148 + L1MA9 LINE L1 5656 6128 -184 4 1228 19004 143 28 15 chr13 84296272 84300626 -35983686 - Lx3C LINE L1 0 6976 2551 4 1228 1897 134 68 3 chr13 84300627 84300963 -35983349 - MusHAL1 LINE L1 -1152 1560 1203 4 1228 4108 94 16 10 chr13 84300967 84301062 -35983250 - MT2B2 LTR ERVL 0 584 495 4 1228 2178 128 0 3 chr13 84301062 84301390 -35982922 + ORR1A2 LTR MaLR 1 327 0 4 1228 4108 94 16 10 chr13 84301390 84301875 -35982437 - MT2B2 LTR ERVL -90 494 1 4 1228 10839 158 40 68 chr13 84301875 84302756 -35981556 - L1_Mur2 LINE L1 -2332 3545 2612 4 1228 318 115 0 0 chr13 84302756 84302808 -35981504 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 4 1228 10839 158 40 68 chr13 84302808 84303383 -35980929 - L1_Mur2 LINE L1 -3266 2611 2061 4 1228 3460 20 2 0 chr13 84303383 84303778 -35980534 - MTA_Mm LTR MaLR 0 396 1 4 1228 10839 158 40 68 chr13 84303778 84303789 -35980523 - L1_Mur2 LINE L1 -3817 2060 2060 4 1228 360 0 0 0 chr13 84303789 84303829 -35980483 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1228 504 0 0 0 chr13 84303839 84303895 -35980417 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 1228 10839 158 40 68 chr13 84303895 84304522 -35979790 - L1_Mur2 LINE L1 -3817 2060 1504 4 1228 1023 54 0 0 chr13 84304522 84304652 -35979660 + (TTC)n Simple_repeat Simple_repeat 1 130 0 4 1228 10839 180 32 41 chr13 84304652 84305198 -35979114 - L1_Mur2 LINE L1 -4374 1503 950 4 1228 261 0 0 0 chr13 84305207 84305236 -35979076 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4 1228 1193 92 0 16 chr13 84305236 84305413 -35978899 - L1Md_F2 LINE L1 -16 6566 6392 4 1228 731 42 11 0 chr13 84307137 84307232 -35977080 + (GAAA)n Simple_repeat Simple_repeat 1 96 0 4 1228 325 307 127 33 chr13 84307589 84307801 -35976511 - Helitron3Na_Mam RC Helitron -31 455 224 4 1228 189 385 30 30 chr13 84308080 84308214 -35976098 - MIR SINE MIR -73 189 56 4 1228 702 189 16 8 chr13 84308353 84308476 -35975836 + B1F2 SINE Alu 22 145 -4 4 1228 206 146 0 24 chr13 84310490 84310532 -35973780 + A-rich Low_complexity Low_complexity 5 45 0 4 1228 27 73 0 0 chr13 84310609 84310664 -35973648 + AT_rich Low_complexity Low_complexity 1 55 0 4 1228 997 278 46 22 chr13 84310715 84311083 -35973229 - MTE2b LTR MaLR -1 378 2 4 1228 221 388 52 56 chr13 84311608 84311840 -35972472 - L2c LINE L2 -227 3160 2930 4 1228 245 317 92 0 chr13 84311986 84312106 -35972206 + Charlie16a DNA MER1_type 134 264 -78 4 1228 226 318 21 54 chr13 84312196 84312289 -35972023 - B1_Mm SINE Alu -55 92 3 4 1228 183 42 0 0 chr13 84312293 84312317 -35971995 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1228 373 211 38 9 chr13 84312397 84312502 -35971810 - RMER1B Other Other -1 1065 958 4 1228 409 259 0 17 chr13 84312729 84312847 -35971465 + L1M2 LINE L1 5684 5799 -501 4 1228 333 0 0 0 chr13 84312848 84312885 -35971427 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 4 1228 781 317 22 8 chr13 84312941 84313208 -35971104 - B4A SINE B4 -21 271 1 4 1228 230 205 174 26 chr13 84313208 84313323 -35970989 + L1M2 LINE L1 5790 5921 -379 4 1228 1227 110 0 6 chr13 84313327 84313501 -35970811 - B2_Mm2 SINE B2 -19 176 4 4 1228 234 0 0 0 chr13 84313839 84313865 -35970447 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1228 225 0 0 0 chr13 84314801 84314826 -35969486 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 1228 450 0 0 0 chr13 84314826 84314875 -35969437 + (GA)n Simple_repeat Simple_repeat 1 50 0 4 1228 1224 194 191 19 chr13 84315170 84315490 -35968822 - ORR1C1 LTR MaLR -1 377 3 4 1228 36 23 0 0 chr13 84315690 84315733 -35968579 + AT_rich Low_complexity Low_complexity 1 43 0 4 1228 220 353 98 25 chr13 84317566 84317841 -35966471 - L2b LINE L2 -210 3216 2919 4 1228 247 276 71 0 chr13 84318105 84318203 -35966109 - L1M5 LINE L1 -1077 5069 4965 4 1228 436 257 96 0 chr13 84318626 84318762 -35965550 + B1F SINE Alu 1 149 0 4 1228 520 236 47 31 chr13 84318792 84318919 -35965393 + B1F SINE Alu 21 149 0 4 1228 2024 106 38 16 chr13 84319301 84319619 -35964693 + ORR1A2 LTR MaLR 3 327 0 4 1228 408 313 51 19 chr13 84319629 84319844 -35964468 + L1M5 LINE L1 4875 5096 -1050 4 1228 440 291 143 8 chr13 84319996 84320262 -35964050 + L1M5 LINE L1 5123 5434 -739 4 1228 1127 291 50 41 chr13 84320262 84320652 -35963660 - MTE2a LTR MaLR 0 379 19 4 1228 447 242 127 16 chr13 84320740 84320866 -35963446 + B1F1 SINE Alu 10 149 0 4 1228 384 235 0 0 chr13 84321038 84321174 -35963138 + (TG)n Simple_repeat Simple_repeat 1 136 0 4 1228 294 330 0 96 chr13 84321178 84321282 -35963030 - RSINE1 SINE B4 0 165 72 4 1228 2594 88 10 20 chr13 84321711 84321832 -35962480 + L1_Mus3 LINE L1 6248 6368 -270 4 1228 3257 33 10 5 chr13 84321832 84322226 -35962086 + MTA_Mm LTR MaLR 1 396 0 4 1228 2594 88 10 20 chr13 84322226 84322499 -35961813 + L1_Mus3 LINE L1 6369 6638 0 4 1228 12450 135 164 12 chr13 84323054 84327820 -35956492 + L1_Mus3 LINE L1 441 6638 0 4 1228 8771 55 0 9 chr13 84327928 84329042 -35955270 - L1Md_F2 LINE L1 -253 5630 4527 4 1228 7176 54 4 53 chr13 84329042 84329800 -35954512 + L1Md_F2 LINE L1 5633 6394 -188 4 1228 1051 77 7 0 chr13 84329800 84329943 -35954369 + B1_Mm SINE Alu 4 147 0 4 1228 7176 54 4 53 chr13 84329943 84330183 -35954129 + L1Md_F2 LINE L1 6395 6582 0 4 1228 289 348 111 11 chr13 84330838 84331018 -35953294 - MIR SINE MIR -34 228 31 4 1228 471 287 0 0 chr13 84331411 84331526 -35952786 + PB1 SINE Alu 13 127 0 4 1228 821 319 49 27 chr13 84332078 84332594 -35951718 - Lx8 LINE L1 0 7473 6936 4 1228 684 311 107 23 chr13 84332805 84333105 -35951207 + Lx8 LINE L1 7041 7365 -108 4 1228 339 356 67 11 chr13 84333126 84333305 -35951007 - LTR82A LTR ERVL -432 440 252 4 1228 1886 208 14 17 chr13 84333325 84333745 -35950567 - MTC LTR MaLR 0 421 3 4 1228 1072 90 28 0 chr13 84333745 84333889 -35950423 + B1_Mus1 SINE Alu 1 148 0 4 1228 254 82 41 0 chr13 84333890 84333939 -35950373 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 4 1228 262 156 203 0 chr13 84335302 84335366 -35948946 + Lx3A LINE L1 6871 6947 -34 4 1228 25 51 0 0 chr13 84335369 84335408 -35948904 + AT_rich Low_complexity Low_complexity 1 39 0 4 1228 9463 84 6 0 chr13 84335653 84337053 -35947259 - MusHAL1 LINE L1 -1223 1489 82 4 1228 303 28 0 0 chr13 84337053 84337089 -35947223 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1228 636 115 0 90 chr13 84337090 84337224 -35947088 - L1_Mus4 LINE L1 -18 6618 6497 4 1228 184 344 0 0 chr13 84337501 84337562 -35946750 - L3 LINE CR1 -855 3634 3574 4 1228 2311 164 2 79 chr13 84337880 84338088 -35946224 + MTC LTR MaLR 1 201 -220 4 1228 1598 121 3 69 chr13 84338088 84338265 -35946047 + Lx3C LINE L1 6694 6859 -117 4 1228 189 0 0 0 chr13 84338265 84338286 -35946026 + (CTGGGG)n Simple_repeat Simple_repeat 1 21 0 4 1228 1598 121 3 69 chr13 84338286 84338411 -35945901 + Lx3C LINE L1 6860 6976 0 4 1228 2311 164 2 79 chr13 84338411 84338658 -35945654 + MTC LTR MaLR 202 421 0 4 1228 679 324 155 77 chr13 84339192 84339384 -35944928 + MLT2B3 LTR ERVL 2 211 -343 4 1228 4739 75 2 0 chr13 84339384 84339994 -35944318 - L1_Mus1 LINE L1 -1 6566 5956 5 1228 679 325 152 71 chr13 84339994 84340278 -35944034 + MLT2B3 LTR ERVL 212 514 -48 4 1228 432 0 0 0 chr13 84340297 84340345 -35943967 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1228 370 250 154 0 chr13 84340359 84340463 -35943849 + PB1D9 SINE Alu 1 120 0 5 1228 266 228 38 0 chr13 84340501 84340580 -35943732 - MER57F LTR ERV1 -103 333 252 5 1228 8993 6 0 0 chr13 84340580 84341640 -35942672 - L1_Mm LINE L1 -419 5464 4405 5 1228 249 33 0 0 chr13 84342061 84342091 -35942221 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1228 681 192 146 23 chr13 84342093 84342312 -35942000 - MER57F LTR ERV1 -186 250 5 5 1228 191 176 0 38 chr13 84342314 84342367 -35941945 + CT-rich Low_complexity Low_complexity 3 53 0 5 1228 270 262 245 26 chr13 84342522 84342714 -35941598 - MLT1D LTR MaLR -270 235 2 5 1228 22 35 0 0 chr13 84343144 84343173 -35941139 + AT_rich Low_complexity Low_complexity 1 29 0 5 1228 629 261 38 6 chr13 84343178 84343336 -35940976 - RSINE1 SINE B4 0 165 3 5 1228 1471 258 36 11 chr13 84343385 84343749 -35940563 + MTE2b LTR MaLR 3 375 -4 5 1228 739 181 0 0 chr13 84343993 84344109 -35940203 + B3A SINE B2 1 116 -82 5 1228 378 0 0 0 chr13 84344125 84344167 -35940145 + (CA)n Simple_repeat Simple_repeat 2 43 0 5 1228 4969 189 22 18 chr13 84344202 84345907 -35938405 - Lx2B LINE L1 -2 7056 5359 5 1228 32260 100 15 15 chr13 84345921 84352292 -35932020 - L1Md_F2 LINE L1 -2 6580 208 5 1228 7851 134 30 8 chr13 84352294 84353708 -35930604 - L1_Mur2 LINE L1 -514 5363 3918 5 1228 436 292 71 25 chr13 84354541 84354780 -35929532 - L3 LINE CR1 -1628 2861 2612 5 1228 333 209 15 0 chr13 84354789 84354856 -35929456 - L3 LINE CR1 -2196 2293 2226 5 1228 223 343 0 0 chr13 84355392 84355459 -35928853 - ID4 SINE ID -16 67 1 5 1228 217 375 0 0 chr13 84355477 84355549 -35928763 - ID4 SINE ID -11 72 1 5 1228 230 314 78 10 chr13 84355651 84355754 -35928558 + Charlie4a DNA MER1_type 86 195 -313 5 1228 673 40 0 20 chr13 84355754 84355856 -35928456 + L1Md_F2 LINE L1 6483 6582 0 5 1228 458 285 214 15 chr13 84355947 84356214 -35928098 + Charlie4a DNA MER1_type 180 499 -9 5 1228 342 0 0 0 chr13 84356356 84356394 -35927918 + (TA)n Simple_repeat Simple_repeat 2 39 0 5 1228 351 315 159 65 chr13 84356700 84356914 -35927398 + B4A SINE B4 1 234 -58 5 1228 404 352 94 12 chr13 84357017 84357273 -35927039 - L1ME3B LINE L1 -292 5948 5672 5 1228 351 272 129 34 chr13 84357973 84358087 -35926225 + MTD LTR MaLR 53 172 -249 5 1228 457 244 121 10 chr13 84358087 84358294 -35926018 - L1_Mur3 LINE L1 -547 5333 5104 5 1228 234 62 0 0 chr13 84358367 84358399 -35925913 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 5 1228 414 0 0 0 chr13 84358656 84358702 -35925610 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1228 558 79 0 0 chr13 84358718 84358794 -35925518 + (GA)n Simple_repeat Simple_repeat 1 76 0 5 1228 269 281 171 0 chr13 84359046 84359128 -35925184 - PB1D10 SINE Alu -8 109 14 5 1228 248 207 29 17 chr13 84359357 84359425 -35924887 - MLT1A LTR MaLR -16 358 298 5 1228 225 316 47 84 chr13 84359480 84359587 -35924725 - MLT1A LTR MaLR -168 206 104 5 1228 258 32 0 0 chr13 84361705 84361736 -35922576 + (CCCCG)n Simple_repeat Simple_repeat 3 33 0 5 1228 439 315 198 11 chr13 84362679 84363042 -35921270 - MER92B LTR ERV1 -199 437 7 5 1228 499 202 11 0 chr13 84363131 84363220 -35921092 - B1_Mus1 SINE Alu -58 90 1 5 1228 207 0 0 0 chr13 84363335 84363358 -35920954 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1228 194 302 75 103 chr13 84363440 84363547 -35920765 - MIR3 SINE MIR -16 192 89 5 1228 522 156 148 0 chr13 84364168 84364296 -35920016 + Lx4A LINE L1 6911 7057 -1 5 1228 252 0 0 0 chr13 84364362 84364390 -35919922 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1228 350 168 232 40 chr13 84365046 84365145 -35919167 + PB1D9 SINE Alu 3 120 0 5 1228 455 248 36 9 chr13 84365231 84365341 -35918971 - PB1D7 SINE Alu -7 113 1 5 1228 22 0 0 0 chr13 84365342 84365364 -35918948 + AT_rich Low_complexity Low_complexity 1 22 0 5 1228 2956 51 3 0 chr13 84365511 84365881 -35918431 - L1_Mus1 LINE L1 0 6567 6197 5 1228 365 113 0 0 chr13 84365881 84365934 -35918378 + L1_Mus1 LINE L1 6137 6189 -378 5 1228 468 219 0 0 chr13 84366602 84366684 -35917628 - B3 SINE B2 -133 83 2 5 1228 379 259 164 18 chr13 84366911 84367131 -35917181 - L1MC1 LINE L1 -265 6068 5817 5 1228 2553 172 36 88 chr13 84367229 84367834 -35916478 - RMER15 LTR ERVL 0 575 2 5 1228 1107 59 0 0 chr13 84368177 84368312 -35916000 + B1_Mus1 SINE Alu 1 135 -13 5 1228 180 0 0 0 chr13 84368313 84368333 -35915979 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 5 1228 647 236 154 45 chr13 84368605 84368884 -35915428 + MTE2a LTR MaLR 77 377 -2 5 1228 1130 42 35 7 chr13 84368920 84369063 -35915249 - B1_Mus2 SINE Alu 0 147 1 5 1228 378 296 89 0 chr13 84369671 84369806 -35914506 + RMER30 DNA MER1_type 38 184 -18 5 1228 220 343 137 0 chr13 84370560 84370662 -35913650 - B1_Mus2 SINE Alu -31 116 1 5 1228 1232 27 0 13 chr13 84370792 84370941 -35913371 + B1_Mm SINE Alu 1 147 0 5 1228 355 289 35 65 chr13 84371500 84371670 -35912642 - RSINE1 SINE B4 0 165 1 5 1228 195 42 0 0 chr13 84371674 84371698 -35912614 + (TCTG)n Simple_repeat Simple_repeat 2 25 0 5 1228 27 29 0 0 chr13 84373375 84373409 -35910903 + AT_rich Low_complexity Low_complexity 1 34 0 5 1228 769 201 207 0 chr13 84373421 84373595 -35910717 + B3 SINE B2 1 210 -6 5 1228 266 358 25 38 chr13 84373648 84373805 -35910507 - B3A SINE B2 -16 182 28 5 1228 243 329 12 25 chr13 84374042 84374123 -35910189 + RSINE1 SINE B4 7 86 -79 5 1228 523 189 66 12 chr13 84374056 84374212 -35910100 + B2_Mm2 SINE B2 18 185 -8 5 1228 511 220 141 25 chr13 84374433 84374554 -35909758 - RSINE1 SINE B4 -28 137 3 5 1228 387 154 0 30 chr13 84375547 84375614 -35908698 - HAL1-3A_ME LINE L1 -817 2041 1977 5 1228 476 216 8 8 chr13 84375689 84375806 -35908506 - Lx6 LINE L1 -13 7447 7331 5 1228 2670 208 113 26 chr13 84375806 84376647 -35907665 - Lx6 LINE L1 -329 7131 6218 5 1228 3221 143 108 7 chr13 84376650 84377113 -35907199 - RLTR17 LTR ERVK 0 692 197 5 1228 198 91 0 0 chr13 84377113 84377146 -35907166 + (TCTG)n Simple_repeat Simple_repeat 2 34 0 5 1228 3221 143 108 7 chr13 84377146 84377294 -35907018 - RLTR17 LTR ERVK -496 196 20 5 1228 4558 174 120 26 chr13 84377294 84378603 -35905709 - Lx6 LINE L1 -1347 6113 4684 5 1228 793 123 34 0 chr13 84378596 84378742 -35905570 - Lx6 LINE L1 -1523 4357 4207 5 1228 9471 154 59 30 chr13 84378750 84379217 -35905095 - Lx6 LINE L1 -2397 3483 2996 5 1228 216 0 0 0 chr13 84379217 84379241 -35905071 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1228 9471 154 59 30 chr13 84379241 84380151 -35904161 - Lx6 LINE L1 -2885 2995 2069 5 1228 360 103 0 0 chr13 84380151 84380209 -35904103 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1228 9471 154 59 30 chr13 84380209 84380598 -35903714 - Lx6 LINE L1 -3812 2068 1660 5 1228 396 198 211 26 chr13 84380598 84380712 -35903600 - B1_Mur3 SINE Alu -13 136 2 5 1228 9471 242 63 62 chr13 84380712 84382331 -35901981 - Lx6 LINE L1 -4221 1659 46 5 1228 3009 32 0 0 chr13 84382412 84382758 -35901554 - ORR1A1 LTR MaLR 0 346 1 5 1228 252 0 0 0 chr13 84383688 84383716 -35900596 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1228 506 16 16 0 chr13 84384309 84384372 -35899940 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1228 344 41 41 0 chr13 84384808 84384857 -35899455 + (GAAAA)n Simple_repeat Simple_repeat 3 53 0 5 1228 2944 68 12 12 chr13 84385454 84385854 -35898458 - MTB LTR MaLR 0 400 1 5 1228 186 365 104 0 chr13 84385969 84386065 -35898247 + MIRc SINE MIR 6 111 -157 5 1228 3948 28 0 0 chr13 84386169 84386628 -35897684 - L1Md_T LINE L1 0 6582 6124 5 1228 183 114 0 0 chr13 84386706 84386741 -35897571 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1228 363 182 318 0 chr13 84389299 84389387 -35894925 - PB1D9 SINE Alu -3 117 2 5 1228 1278 183 42 69 chr13 84389494 84389828 -35894484 - Lx7 LINE L1 0 7696 7372 5 1228 2650 170 104 54 chr13 84389854 84389890 -35894422 + L1_Mur3 LINE L1 2024 2085 -3795 5 1228 339 25 0 0 chr13 84389890 84389930 -35894382 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1228 2650 170 104 54 chr13 84389930 84390545 -35893767 + L1_Mur3 LINE L1 2086 2708 -3172 5 1228 337 350 42 18 chr13 84390974 84391140 -35893172 - ID_B1 SINE B4 0 224 55 5 1228 25 0 0 0 chr13 84391631 84391656 -35892656 + AT_rich Low_complexity Low_complexity 1 25 0 5 1228 32 91 0 0 chr13 84392959 84393047 -35891265 + AT_rich Low_complexity Low_complexity 1 88 0 5 1228 363 301 278 21 chr13 84393958 84394199 -35890113 + Tigger7 DNA MER2_type 5 307 -2184 5 1228 1074 210 87 14 chr13 84394216 84394491 -35889821 + Tigger7 DNA MER2_type 2159 2453 -38 5 1228 257 153 361 0 chr13 84394838 84394910 -35889402 - MER82 DNA MER2_type -555 98 1 5 1228 181 244 73 0 chr13 84395050 84395091 -35889221 - MIRb SINE MIR -21 247 204 5 1228 258 300 103 97 chr13 84395687 84395842 -35888470 - MER21B LTR ERV1 -555 308 153 5 1228 313 269 87 34 chr13 84396251 84396459 -35887853 - L1MC5 LINE L1 -143 7818 7600 5 1228 531 258 91 20 chr13 84398383 84398581 -35885731 + B3 SINE B2 1 212 -4 5 1228 406 270 171 21 chr13 84398812 84399005 -35885307 - ID_B1 SINE B4 -1 223 2 5 1228 236 366 102 36 chr13 84400390 84400557 -35883755 - MER5B DNA MER1_type 0 178 1 5 1228 282 244 148 0 chr13 84400602 84400717 -35883595 - Lx7 LINE L1 0 7696 7565 5 1228 7113 228 62 22 chr13 84400813 84401591 -35882721 - Lx7 LINE L1 -279 7417 6616 5 1228 2936 67 15 8 chr13 84401591 84401984 -35882328 + MTA_Mm LTR MaLR 1 396 0 5 1228 7113 207 60 16 chr13 84401984 84404075 -35880237 - Lx7 LINE L1 -1081 6615 4414 5 1228 847 246 64 5 chr13 84404361 84404565 -35879747 + ID_B1 SINE B4 2 217 -7 5 1228 3008 62 0 5 chr13 84404645 84405036 -35879276 - L1Md_F2 LINE L1 -12 6570 6182 5 1228 8786 95 9 6 chr13 84405043 84406834 -35877478 - L1_Mus2 LINE L1 -193 6445 4608 5 1228 14489 143 22 38 chr13 84406829 84410050 -35874262 - L1_Mus2 LINE L1 -2330 3553 395 5 153 1067 290 159 17 chr13 84410059 84410602 -35873710 - Lx6 LINE L1 -68 7392 6429 5 1229 204 185 18 18 chr13 84412786 84412818 -35871494 + T-rich Low_complexity Low_complexity 24 56 0 5 1229 1169 62 0 14 chr13 84412818 84412966 -35871346 - B1_Mus2 SINE Alu 0 147 2 5 1229 204 185 18 18 chr13 84412966 84412988 -35871324 + T-rich Low_complexity Low_complexity 2 23 0 5 1229 185 59 0 56 chr13 84413089 84413125 -35871187 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1229 311 0 0 25 chr13 84413133 84413173 -35871139 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1229 1096 95 0 20 chr13 84413173 84413315 -35870997 - B1_Mus1 SINE Alu -8 140 2 6 1229 1114 277 106 31 chr13 84416011 84416428 -35867884 - Lx8 LINE L1 -976 6497 6050 6 1229 3067 283 145 20 chr13 84416720 84418547 -35865765 - Lx8 LINE L1 -52 5828 3774 6 1229 282 292 21 0 chr13 84418620 84418716 -35865596 - Lx9 LINE L1 -13 7631 7534 6 1229 291 282 40 71 chr13 84418880 84419006 -35865306 + MT2B LTR ERVL 157 278 -323 6 1229 713 163 44 15 chr13 84418894 84419031 -35865281 + B1_Mur3 SINE Alu 9 149 0 6 1229 633 183 8 8 chr13 84419077 84419198 -35865114 - Lx9 LINE L1 -706 6938 6818 6 1229 221 302 16 0 chr13 84419835 84419898 -35864414 + ID2 SINE ID 11 74 -9 6 1229 27 0 0 0 chr13 84419918 84419945 -35864367 + AT_rich Low_complexity Low_complexity 1 27 0 6 1229 183 80 0 0 chr13 84420262 84420287 -35864025 + (T)n Simple_repeat Simple_repeat 1 25 0 6 1229 207 0 0 0 chr13 84420337 84420360 -35863952 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1229 189 132 0 0 chr13 84420436 84420474 -35863838 + (A)n Simple_repeat Simple_repeat 1 38 0 6 1229 254 224 0 12 chr13 84420793 84420879 -35863433 + CT-rich Low_complexity Low_complexity 2 86 0 6 1229 21 0 0 0 chr13 84421831 84421852 -35862460 + AT_rich Low_complexity Low_complexity 1 21 0 6 1229 22 35 0 0 chr13 84423556 84423585 -35860727 + AT_rich Low_complexity Low_complexity 1 29 0 6 1229 44 0 0 0 chr13 84423803 84423847 -35860465 + AT_rich Low_complexity Low_complexity 1 44 0 6 1229 24 32 0 0 chr13 84424032 84424063 -35860249 + AT_rich Low_complexity Low_complexity 1 31 0 6 1229 507 119 0 35 chr13 84424389 84424502 -35859810 - L1Md_F2 LINE L1 -1 6581 6473 6 1229 333 0 0 0 chr13 84424796 84424833 -35859479 + (T)n Simple_repeat Simple_repeat 1 37 0 6 1229 292 269 106 0 chr13 84425681 84425785 -35858527 + PB1D10 SINE Alu 3 117 0 6 1229 721 233 0 0 chr13 84426485 84426618 -35857694 - B1_Mur2 SINE Alu -5 144 12 6 1229 28 48 0 0 chr13 84427090 84427132 -35857180 + AT_rich Low_complexity Low_complexity 1 42 0 6 1229 397 329 52 17 chr13 84427502 84427675 -35856637 + MIRb SINE MIR 50 228 -40 6 1229 758 181 8 8 chr13 84428463 84428597 -35855715 + B1_Mus1 SINE Alu 2 135 -13 6 1229 291 28 0 0 chr13 84428908 84428944 -35855368 + (ATTG)n Simple_repeat Simple_repeat 3 38 0 6 1229 248 246 29 44 chr13 84428945 84429013 -35855299 - PB1D9 SINE Alu -12 108 42 6 1229 453 189 0 0 chr13 84429806 84429896 -35854416 + T-rich Low_complexity Low_complexity 2 91 0 6 1229 368 311 19 10 chr13 84429905 84430009 -35854303 + B4A SINE B4 3 107 -185 6 1229 2505 138 140 50 chr13 84430239 84430775 -35853537 - RLTR31A_Mm LTR ERVK 0 584 1 6 1229 1290 192 235 19 chr13 84430842 84431166 -35853146 - ORR1B1 LTR MaLR 0 394 1 6 1229 436 269 71 82 chr13 84431210 84431380 -35852932 - B4A SINE B4 0 292 125 6 1229 220 27 54 0 chr13 84434111 84434148 -35850164 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1229 31 0 0 0 chr13 84435301 84435332 -35848980 + AT_rich Low_complexity Low_complexity 1 31 0 6 1229 2644 226 59 56 chr13 84435583 84436283 -35848029 - Lx6 LINE L1 -10 7450 6749 6 1229 5701 217 96 23 chr13 84436277 84438045 -35846267 - Lx6 LINE L1 -1300 6160 4293 6 1229 5825 183 51 126 chr13 84438047 84440045 -35844267 - ORR1B1-int LTR MaLR 0 1963 6 6 1229 3962 200 72 6 chr13 84440046 84440946 -35843366 - Lx2B LINE L1 -14 6983 6000 6 1229 13746 85 21 21 chr13 84440951 84442226 -35842086 - L1_Mus2 LINE L1 0 6654 5337 6 1229 267 31 0 0 chr13 84442226 84442258 -35842054 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 6 1229 23905 103 16 4 chr13 84442258 84447315 -35836997 - L1_Mus2 LINE L1 -550 5336 398 6 1229 1958 147 47 0 chr13 84447304 84447664 -35836648 - Lx3C LINE L1 -961 6015 5639 6 1229 1949 194 27 92 chr13 84447664 84447856 -35836456 - ORR1B1-int LTR MaLR -1513 450 275 6 1229 1190 68 0 0 chr13 84447856 84448002 -35836310 + B1_Mm SINE Alu 2 147 0 6 1229 1949 194 27 92 chr13 84448002 84448290 -35836022 - ORR1B1-int LTR MaLR -1689 274 1 6 1229 945 229 248 17 chr13 84448290 84448588 -35835724 - ORR1B1 LTR MaLR 0 367 1 6 1229 6579 158 122 23 chr13 84448588 84450304 -35834008 - L1_Mur3 LINE L1 -1582 4298 2413 6 1229 201 39 0 0 chr13 84450337 84450363 -35833949 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1229 327 25 0 0 chr13 84450363 84450402 -35833910 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1229 3697 214 55 21 chr13 84450417 84452068 -35832244 - L1_Mur3 LINE L1 -3829 2051 339 6 1229 994 84 0 0 chr13 84452069 84452200 -35832112 - MTB LTR MaLR -269 131 1 6 1229 587 154 186 47 chr13 84452648 84452777 -35831535 - B1_Mus2 SINE Alu 0 147 1 6 1229 2948 155 79 53 chr13 84454397 84455070 -35829242 + RMER6C LTR ERVK 1 690 0 6 1229 21 82 0 0 chr13 84455390 84455439 -35828873 + AT_rich Low_complexity Low_complexity 1 49 0 6 1229 268 307 99 14 chr13 84455531 84455673 -35828639 - ERVL-B4-int LTR ERVL -3544 2170 2017 6 1229 387 250 114 24 chr13 84455678 84455692 -35828620 + B1F1 SINE Alu 13 144 -3 6 1229 487 192 84 28 chr13 84455692 84455799 -35828513 + ID_B1 SINE B4 108 220 -4 6 1229 4870 69 1 11 chr13 84456202 84456848 -35827464 - L1Md_F2 LINE L1 0 6582 5943 6 1229 2588 52 0 0 chr13 84456848 84457176 -35827136 + L1Md_F2 LINE L1 5593 5920 -662 6 1229 218 290 43 0 chr13 84457206 84457275 -35827037 - ID4_ SINE ID -10 73 2 6 1229 556 327 134 16 chr13 84457814 84458225 -35826087 - Lx8 LINE L1 0 7473 7006 6 1229 317 300 165 30 chr13 84459297 84459527 -35824785 - MLT1H1 LTR MaLR 0 555 295 6 1229 23 33 0 0 chr13 84460165 84460195 -35824117 + AT_rich Low_complexity Low_complexity 1 30 0 6 1229 495 0 0 0 chr13 84460229 84460284 -35824028 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1229 729 0 0 0 chr13 84460946 84461027 -35823285 + (GGA)n Simple_repeat Simple_repeat 2 82 0 6 1229 415 214 0 0 chr13 84461154 84461243 -35823069 + L1_Mur1 LINE L1 663 751 -6231 6 1229 1032 134 9 77 chr13 84461307 84461518 -35822794 - RLTR17 LTR ERVK -214 208 1 6 1229 16294 116 32 19 chr13 84461531 84464424 -35819888 + L1_Mur1 LINE L1 1778 4710 -1176 6 1229 546 201 255 19 chr13 84464625 84464753 -35819559 + B3A SINE B2 5 170 -28 6 1229 528 30 0 0 chr13 84464753 84464819 -35819493 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1229 546 201 255 19 chr13 84464819 84464847 -35819465 + B3A SINE B2 171 198 0 6 1229 243 249 202 26 chr13 84464854 84465005 -35819307 + B3A SINE B2 2 186 -12 6 1229 261 0 0 0 chr13 84465431 84465460 -35818852 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1229 364 270 43 70 chr13 84465468 84465655 -35818657 + L1MC3 LINE L1 7587 7768 -17 6 1229 718 270 45 10 chr13 84466189 84466391 -35817921 + B3 SINE B2 2 210 -6 6 1229 1375 99 16 0 chr13 84466398 84466590 -35817722 - B2_Mm2 SINE B2 0 195 1 6 1229 265 254 14 27 chr13 84466671 84466744 -35817568 - ID4 SINE ID -10 73 2 6 1229 244 70 0 44 chr13 84466888 84466933 -35817379 + (TA)n Simple_repeat Simple_repeat 2 44 0 6 1229 759 189 35 0 chr13 84467003 84467146 -35817166 + B1_Mur3 SINE Alu 1 148 -1 6 1229 453 329 20 7 chr13 84467475 84467622 -35816690 - B1F SINE Alu 0 149 1 6 1229 250 339 55 24 chr13 84467510 84467637 -35816675 - B4 SINE B4 -92 200 70 6 1229 2732 99 53 0 chr13 84468240 84468673 -35815639 - Lx2 LINE L1 -789 6208 5753 6 1229 5308 101 35 31 chr13 84468673 84469484 -35814828 + Lx2 LINE L1 6184 6997 0 6 1229 769 195 0 0 chr13 84469766 84469889 -35814423 + B3 SINE B2 1 123 -93 6 1229 21 36 0 0 chr13 84469903 84469931 -35814381 + AT_rich Low_complexity Low_complexity 1 28 0 6 1229 407 311 51 83 chr13 84469938 84470294 -35814018 - MLT1A1 LTR MaLR -28 346 1 6 1229 887 250 56 0 chr13 84471097 84471293 -35813019 - B3 SINE B2 -8 208 2 6 1229 181 0 0 65 chr13 84471785 84471816 -35812496 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 6 1229 508 219 4 8 chr13 84471811 84472057 -35812255 + GA-rich Low_complexity Low_complexity 1 244 0 6 1229 762 69 0 0 chr13 84473391 84473492 -35810820 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 6 1229 567 78 0 0 chr13 84473492 84473569 -35810743 + (TCCC)n Simple_repeat Simple_repeat 3 79 0 6 1229 270 0 0 0 chr13 84473571 84473601 -35810711 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 6 1229 281 47 23 0 chr13 84473622 84473665 -35810647 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 6 1229 1123 65 0 0 chr13 84473672 84473810 -35810502 - B1_Mus1 SINE Alu -10 138 1 6 1229 25 0 0 0 chr13 84474847 84474872 -35809440 + AT_rich Low_complexity Low_complexity 1 25 0 6 1229 450 197 0 0 chr13 84474899 84474975 -35809337 - B3 SINE B2 -110 106 31 6 1229 1032 63 0 0 chr13 84475016 84475143 -35809169 - B1_Mm SINE Alu -19 128 2 6 1229 281 212 71 26 chr13 84476007 84476162 -35808150 - RMER17D LTR ERVK -383 506 345 6 1229 498 271 41 77 chr13 84476203 84476399 -35807913 + B3A SINE B2 10 198 0 6 1229 333 266 75 0 chr13 84476820 84476914 -35807398 - PB1D9 SINE Alu -16 104 4 6 1229 215 245 0 0 chr13 84476917 84476970 -35807342 + T-rich Low_complexity Low_complexity 1 53 0 6 1229 3001 48 0 11 chr13 84476977 84477355 -35806957 - L1Md_F2 LINE L1 -14 6568 6195 6 1229 729 139 130 0 chr13 84477432 84477547 -35806765 + B1_Mus2 SINE Alu 1 130 -17 6 1229 1070 258 107 21 chr13 84477722 84478106 -35806206 + Lx6 LINE L1 7012 7428 -32 6 1229 24 0 0 0 chr13 84478106 84478130 -35806182 + AT_rich Low_complexity Low_complexity 1 24 0 6 1229 309 51 0 0 chr13 84478519 84478558 -35805754 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1229 288 0 0 0 chr13 84480835 84480867 -35803445 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1229 180 257 54 54 chr13 84481826 84481900 -35802412 + L4 LINE RTE 1276 1349 -680 6 1229 21 36 0 0 chr13 84482393 84482421 -35801891 + AT_rich Low_complexity Low_complexity 1 28 0 6 1229 25 0 0 0 chr13 84482643 84482668 -35801644 + AT_rich Low_complexity Low_complexity 1 25 0 6 1229 215 173 19 19 chr13 84484670 84484723 -35799589 + T-rich Low_complexity Low_complexity 4 56 0 6 1229 282 160 0 0 chr13 84485172 84485222 -35799090 + T-rich Low_complexity Low_complexity 1 50 0 7 1229 208 241 57 11 chr13 84486170 84486258 -35798054 + GA-rich Low_complexity Low_complexity 2 93 0 7 1229 30 0 0 0 chr13 84486498 84486528 -35797784 + AT_rich Low_complexity Low_complexity 1 30 0 7 1229 221 253 0 26 chr13 84487932 84488009 -35796303 + CT-rich Low_complexity Low_complexity 1 75 0 7 1229 198 0 0 0 chr13 84488903 84488925 -35795387 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1229 280 221 21 85 chr13 84492287 84492381 -35791931 - MIRc SINE MIR -43 225 138 7 1229 217 292 0 58 chr13 84492413 84492482 -35791830 + MIR SINE MIR 177 241 -21 7 1229 307 309 143 56 chr13 84492476 84492637 -35791675 - MIRb SINE MIR -53 215 41 7 1229 2542 189 86 19 chr13 84492988 84493561 -35790751 - RMER19C LTR ERVK 0 611 1 7 1229 241 324 35 18 chr13 84494020 84494133 -35790179 + MLT1A LTR MaLR 11 125 -249 7 1229 1811 202 41 41 chr13 84494170 84494609 -35789703 - RLTR20B3 LTR ERVK -51 526 88 7 1229 228 295 31 21 chr13 84494790 84494887 -35789425 + ORR1D2 LTR MaLR 273 370 0 7 1229 359 353 39 16 chr13 84494947 84495152 -35789160 + L2c LINE L2 2981 3181 -194 7 1229 277 291 125 8 chr13 84496573 84496701 -35787611 - MARNA DNA Mariner -135 451 309 7 1229 191 310 0 0 chr13 84497115 84497173 -35787139 - MER5A DNA MER1_type -87 102 45 7 1229 180 158 0 0 chr13 84497960 84497998 -35786314 + (TTAA)n Simple_repeat Simple_repeat 2 39 0 7 1229 234 91 0 0 chr13 84498000 84498033 -35786279 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1229 8391 14 1 0 chr13 84498077 84499645 -35784667 - L1Md_T LINE L1 0 6582 5013 7 1229 257 312 135 0 chr13 84499645 84499741 -35784571 - RSINE1 SINE B4 -55 110 2 7 1229 276 232 179 0 chr13 84500004 84500099 -35784213 - B1F1 SINE Alu -10 139 28 1 1229 250 167 27 27 chr13 84500570 84500644 -35783668 + (TATATG)n Simple_repeat Simple_repeat 1 74 0 2 1229 492 275 158 24 chr13 84500648 84500831 -35783481 - B3A SINE B2 -13 203 1 3 1229 3640 201 23 137 chr13 84500841 84501970 -35782342 - RMER1B Other Other -5 1061 168 4 1229 2570 241 106 63 chr13 84501959 84503563 -35780749 - Lx9 LINE L1 -582 7062 5341 5 1229 1339 105 10 16 chr13 84503582 84503615 -35780697 - B2_Mm1t SINE B2 -1 192 161 6 1229 243 0 0 0 chr13 84503615 84503642 -35780670 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 7 1229 1339 105 10 16 chr13 84503642 84503801 -35780511 - B2_Mm1t SINE B2 -33 160 1 6 1229 1211 270 111 29 chr13 84503807 84504295 -35780017 - Lx8 LINE L1 -17 7456 6929 8 1229 2051 160 88 6 chr13 84504326 84504665 -35779647 - ORR1B2 LTR MaLR 0 367 1 9 1229 198 0 0 0 chr13 84505215 84505237 -35779075 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1229 4525 155 93 17 chr13 84505281 84505995 -35778317 + RLTR25A LTR ERVK 156 890 -213 1 1229 3752 52 2 18 chr13 84505995 84506443 -35777869 + L1_Mus1 LINE L1 6127 6567 0 1 1229 4525 155 93 17 chr13 84506443 84506484 -35777828 + RLTR25A LTR ERVK 891 969 -134 1 1229 252 0 0 0 chr13 84506484 84506512 -35777800 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 1229 4525 155 93 17 chr13 84506512 84506635 -35777677 + RLTR25A LTR ERVK 970 1101 -2 1 1229 200 217 22 0 chr13 84506636 84506682 -35777630 + (TCTG)n Simple_repeat Simple_repeat 4 50 0 1 1229 240 227 0 96 chr13 84507027 84507100 -35777212 - ID_B1 SINE B4 -38 186 121 1 1229 227 344 20 20 chr13 84507880 84507978 -35776334 - MLT1L LTR MaLR -318 292 195 1 1229 193 360 31 16 chr13 84508212 84508339 -35775973 + L2c LINE L2 3038 3166 -221 1 1229 317 378 75 30 chr13 84508394 84508765 -35775547 + Tigger12c DNA MER2_type 3 390 -344 1 1229 23 33 0 0 chr13 84508799 84508829 -35775483 + AT_rich Low_complexity Low_complexity 1 30 0 1 1229 711 259 27 60 chr13 84510130 84510315 -35773997 - B3A SINE B2 -18 180 2 2 1229 1001 229 86 8 chr13 84510603 84510858 -35773454 - MTE2a LTR MaLR 0 379 105 2 1229 276 299 72 0 chr13 84510942 84511039 -35773273 - MTE2a LTR MaLR -266 113 10 2 1229 353 301 101 28 chr13 84511110 84511288 -35773024 + MLT1D LTR MaLR 48 238 -267 2 1229 746 143 0 8 chr13 84512406 84512540 -35771772 + GA-rich Low_complexity Low_complexity 1 133 0 2 1229 276 30 0 0 chr13 84513326 84513359 -35770953 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1229 243 0 0 0 chr13 84514505 84514532 -35769780 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1229 849 245 45 2 chr13 84514705 84514911 -35769401 - B3 SINE B2 0 216 1 2 1229 1616 42 5 20 chr13 84515023 84515218 -35769094 - B2_Mm1t SINE B2 0 193 2 2 1229 937 140 28 7 chr13 84516036 84516180 -35768132 - B1_Mm SINE Alu 0 147 1 2 1229 317 279 178 44 chr13 84516190 84516280 -35768032 - PB1D10 SINE Alu -7 110 9 2 1229 24 0 0 0 chr13 84516414 84516438 -35767874 + AT_rich Low_complexity Low_complexity 1 24 0 3 1229 468 51 0 0 chr13 84517218 84517277 -35767035 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1229 848 267 175 29 chr13 84517280 84517589 -35766723 - MLT1A0 LTR MaLR -3 362 9 3 1229 261 0 0 0 chr13 84517594 84517623 -35766689 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 3 1229 297 0 0 0 chr13 84518015 84518048 -35766264 + (TA)n Simple_repeat Simple_repeat 1 33 0 3 1229 390 88 0 0 chr13 84518058 84518115 -35766197 - RMER19B LTR ERVK -12 890 834 3 1229 248 234 115 92 chr13 84518317 84518491 -35765821 + RLTR43A LTR ERVK 187 364 0 3 1229 4306 180 37 64 chr13 84518491 84519353 -35764959 - RMER19B LTR ERVK -63 839 1 3 1229 628 248 113 18 chr13 84519390 84519685 -35764627 - L1MB3 LINE L1 -130 6053 5738 3 1229 1731 195 261 16 chr13 84519697 84520207 -35764105 - Lx4B LINE L1 0 7058 6424 3 1229 1998 219 39 9 chr13 84520181 84520623 -35763689 + Lx4B LINE L1 5962 6416 -642 3 1229 260 255 50 69 chr13 84520624 84520725 -35763587 - L1MB3 LINE L1 -422 5749 5651 3 1229 225 83 0 0 chr13 84520728 84520764 -35763548 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1229 765 286 0 59 chr13 84520898 84521102 -35763210 - B3A SINE B2 -5 193 2 4 1229 299 197 14 0 chr13 84521104 84521175 -35763137 - L1MB3 LINE L1 -502 5669 5598 3 1229 4612 183 51 14 chr13 84521182 84522047 -35762265 - Lx2B LINE L1 -5 6995 6099 4 1229 3284 146 23 3 chr13 84522047 84522705 -35761607 - Lx2B LINE L1 -1044 5956 5282 4 1229 21 0 0 0 chr13 84522705 84522726 -35761586 + AT_rich Low_complexity Low_complexity 1 21 0 4 1229 428 347 34 7 chr13 84522892 84523040 -35761272 + MLT1K LTR MaLR 276 427 -168 4 1229 3514 169 49 8 chr13 84523479 84524195 -35760117 + RLTR25A LTR ERVK 1 897 -206 4 1229 183 80 0 0 chr13 84524195 84524220 -35760092 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1229 1321 231 154 16 chr13 84524220 84524396 -35759916 + RLTR25A LTR ERVK 898 1091 -12 4 1229 2862 135 71 25 chr13 84525150 84525659 -35758653 + RLTR47_MM LTR ERV1 1 532 0 4 1229 379 310 44 47 chr13 84525990 84526394 -35757918 + RLTR6-int LTR ERV1 310 803 -6803 4 1229 3202 23 9 0 chr13 84526615 84526958 -35757354 - ORR1A0 LTR MaLR 0 346 1 4 1229 1189 309 73 52 chr13 84527111 84527875 -35756437 + RLTR6-int LTR ERV1 1050 1829 -3234 4 1229 391 363 55 33 chr13 84528054 84528781 -35755531 + RLTR6-int LTR ERV1 4121 4455 -3151 4 1229 1429 266 82 11 chr13 84529152 84529615 -35754697 + RLTR6-int LTR ERV1 4900 5395 -2383 4 1229 267 343 0 9 chr13 84529795 84529901 -35754411 + RLTR6-int LTR ERV1 5485 5589 -2012 4 1229 957 316 50 41 chr13 84530434 84531074 -35753238 + RLTR6-int LTR ERV1 7007 7652 -126 5 1229 328 360 44 91 chr13 84531258 84531533 -35752779 + ORR1E LTR MaLR 55 316 -43 5 1229 264 229 65 16 chr13 84531673 84531735 -35752577 - B1_Mur1 SINE Alu -8 141 77 5 1229 3472 86 20 7 chr13 84531840 84532297 -35752015 - L1_Mus3 LINE L1 0 6638 6176 5 1229 180 0 0 0 chr13 84532967 84532987 -35751325 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1229 1228 54 0 13 chr13 84533170 84533319 -35750993 + B1_Mm SINE Alu 1 147 0 5 1229 479 17 17 0 chr13 84533328 84533388 -35750924 + (GA)n Simple_repeat Simple_repeat 2 62 0 5 1229 235 304 70 92 chr13 84533436 84533621 -35750691 + ORR1D2 LTR MaLR 88 268 -102 5 1229 185 82 60 20 chr13 84533862 84533912 -35750400 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1229 1837 131 18 68 chr13 84534143 84534480 -35749832 + ORR1A4 LTR MaLR 1 320 -9 5 1229 313 280 58 116 chr13 84534497 84534712 -35749600 + HAL1 LINE L1 1275 1473 -1034 6 1229 3472 45 2 5 chr13 84534712 84535109 -35749203 + MTA_Mm LTR MaLR 1 396 0 6 1229 313 280 58 116 chr13 84535109 84535168 -35749144 + HAL1 LINE L1 1474 1533 -974 6 1229 281 246 0 0 chr13 84535466 84535531 -35748781 + L1_Mur2 LINE L1 5381 5445 -432 6 1229 1020 208 14 33 chr13 84535531 84535745 -35748567 + B3 SINE B2 6 215 -1 6 1229 806 307 45 6 chr13 84535756 84536087 -35748225 + L1MA5A LINE L1 5483 5826 -471 6 1229 527 223 62 0 chr13 84536099 84536211 -35748101 + B1_Mur2 SINE Alu 26 144 -5 6 1229 285 240 0 26 chr13 84536212 84536289 -35748023 + GA-rich Low_complexity Low_complexity 2 76 0 6 1229 272 254 142 26 chr13 84536289 84536402 -35747910 + L1MA5A LINE L1 5780 5928 -369 6 1229 513 0 0 0 chr13 84537513 84537570 -35746742 + (CATTT)n Simple_repeat Simple_repeat 2 58 0 6 1229 559 224 32 0 chr13 84537575 84537700 -35746612 - ID_B1 SINE B4 -3 221 93 6 1229 24 0 0 0 chr13 84538994 84539018 -35745294 + AT_rich Low_complexity Low_complexity 1 24 0 6 1229 360 64 0 0 chr13 84539744 84539791 -35744521 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 1229 207 0 0 0 chr13 84539792 84539815 -35744497 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1230 1245 75 0 0 chr13 84541953 84542100 -35742212 - B1_Mus2 SINE Alu 0 147 1 7 1230 221 273 36 0 chr13 84542311 84542366 -35741946 - ID SINE ID -145 79 23 7 1230 284 231 77 0 chr13 84542501 84542566 -35741746 + ID4 SINE ID 4 73 -10 7 1230 1146 86 0 0 chr13 84542887 84543026 -35741286 - B1_Mus2 SINE Alu -8 139 1 7 1230 207 69 0 0 chr13 84545077 84545106 -35739206 + (A)n Simple_repeat Simple_repeat 1 29 0 7 1230 263 340 21 0 chr13 84546684 84546781 -35737531 + MIRb SINE MIR 125 223 -45 7 1230 2413 236 253 18 chr13 84546865 84546972 -35737340 - RMER1A Other Other -2 1028 888 7 1230 243 0 0 0 chr13 84546972 84546999 -35737313 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 7 1230 2413 250 191 39 chr13 84546999 84547974 -35736338 - RMER1A Other Other -143 887 40 7 1230 1456 236 71 6 chr13 84548618 84548968 -35735344 + Lx7 LINE L1 6947 7319 -377 8 1230 226 185 30 30 chr13 84549045 84549112 -35735200 + (TTTG)n Simple_repeat Simple_repeat 2 68 0 8 1230 233 210 0 16 chr13 84549788 84549829 -35734483 + (TAAG)n Simple_repeat Simple_repeat 2 42 0 8 1230 1259 54 7 0 chr13 84549829 84549976 -35734336 + B1_Mus1 SINE Alu 1 148 0 8 1230 233 210 0 16 chr13 84549976 84549997 -35734315 + (TAAG)n Simple_repeat Simple_repeat 3 23 0 8 1230 398 118 21 21 chr13 84549995 84550090 -35734222 + GA-rich Low_complexity Low_complexity 2 96 0 8 1230 633 296 166 12 chr13 84550492 84550830 -35733482 - Lx8 LINE L1 -143 7330 6941 8 1230 423 0 0 0 chr13 84550861 84550908 -35733404 + (TTTTA)n Simple_repeat Simple_repeat 2 48 0 8 1230 875 167 14 0 chr13 84550908 84551046 -35733266 - B1_Mus1 SINE Alu -8 140 1 8 1230 593 49 12 0 chr13 84551064 84551145 -35733167 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 8 1230 23 0 0 0 chr13 84551404 84551427 -35732885 + AT_rich Low_complexity Low_complexity 1 23 0 9 1230 267 203 15 132 chr13 84551433 84551501 -35732811 - B1_Mur2 SINE Alu -39 110 51 9 1230 926 27 47 13 chr13 84552038 84552188 -35732124 + (TCTCC)n Simple_repeat Simple_repeat 3 157 0 9 1230 3297 39 3 16 chr13 84552962 84553349 -35730963 + L1_Mus1 LINE L1 6171 6552 -15 9 1230 494 333 0 0 chr13 84553535 84553706 -35730606 + RodERV21-int LTR ERV1 730 900 -4091 9 1230 7845 84 9 6 chr13 84553722 84554935 -35729377 - L1_Mus3 LINE L1 -6 6632 5416 9 1230 2001 274 18 20 chr13 84555326 84555878 -35728434 + RodERV21-int LTR ERV1 1252 1802 -3189 9 1230 997 178 6 0 chr13 84555878 84556058 -35728254 + L1_Mur1 LINE L1 4973 5153 -733 9 1230 15517 171 21 34 chr13 84556685 84557923 -35726389 - L1VL4 LINE L1 -1212 4674 3482 9 1230 226 0 29 29 chr13 84557923 84557958 -35726354 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 1230 15517 163 24 30 chr13 84557958 84560488 -35723824 - L1VL4 LINE L1 -2405 3481 940 9 1230 2338 92 78 97 chr13 84560491 84560975 -35723337 - IAPLTR2_Mm LTR ERVK 0 475 1 9 1230 5733 42 4 19 chr13 84560977 84561732 -35722580 - IAPEz-int LTR ERVK -2 6479 5736 9 1230 2040 79 0 0 chr13 84561731 84562009 -35722303 - IAPEz-int LTR ERVK -4845 1636 1359 9 1230 3738 51 2 18 chr13 84562009 84562512 -35721800 - IAPEz-int LTR ERVK -5819 662 168 9 1230 226 327 0 0 chr13 84562512 84562567 -35721745 - RLTR27 LTR ERVK -34 275 221 1 1230 226 321 0 0 chr13 84562593 84562646 -35721666 - RLTR27 LTR ERVK -34 275 223 1 1230 924 120 14 111 chr13 84562646 84562853 -35721459 - IAPEz-int LTR ERVK -6286 195 9 1 1230 2448 87 74 97 chr13 84562854 84563340 -35720972 - IAPLTR2_Mm LTR ERVK 0 475 1 1 1230 3268 157 30 9 chr13 84563340 84563907 -35720405 - L1VL4 LINE L1 -5715 587 9 1 1230 918 163 7 0 chr13 84565032 84565185 -35719127 + L1VL4 LINE L1 8 161 -6141 1 1230 228 35 0 0 chr13 84566064 84566093 -35718219 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1230 2406 147 28 47 chr13 84566115 84566585 -35717727 + RMER6B LTR ERVK 1 461 0 1 1230 2672 117 23 37 chr13 84566654 84567090 -35717222 + RLTR23 LTR ERV1 1 430 0 1 1230 261 155 60 0 chr13 84567750 84567834 -35716478 + (TCTCTG)n Simple_repeat Simple_repeat 2 90 0 1 1230 36 91 0 0 chr13 84568476 84568575 -35715737 + AT_rich Low_complexity Low_complexity 1 99 0 1 1230 22 56 0 0 chr13 84568795 84568831 -35715481 + AT_rich Low_complexity Low_complexity 1 36 0 1 1230 1628 100 56 0 chr13 84568831 84569062 -35715250 + L1_Mus2 LINE L1 6322 6565 -1 1 1230 27 0 0 0 chr13 84569362 84569389 -35714923 + AT_rich Low_complexity Low_complexity 1 27 0 1 1230 5166 68 3 0 chr13 84569389 84570046 -35714266 - L1_Mus1 LINE L1 -2 6565 5907 1 1230 5954 93 0 2 chr13 84570048 84570921 -35713391 + L1_Mm LINE L1 4153 5023 -860 1 1230 1278 190 16 8 chr13 84570925 84571169 -35713143 - RLTR17 LTR ERVK -349 343 98 1 1230 2696 206 33 37 chr13 84571192 84571977 -35712335 - RMER3D-int LTR ERVK 0 2842 2061 1 1230 1153 138 29 15 chr13 84572005 84572211 -35712101 - RLTR31A_Mm LTR ERVK -287 297 89 1 1230 1191 199 116 24 chr13 84572218 84572678 -35711634 - RMER3D-int LTR ERVK -794 2048 1547 1 1230 989 46 0 0 chr13 84572736 84572866 -35711446 - L1_Mus2 LINE L1 -73 6493 6364 1 1230 5228 269 70 23 chr13 84572877 84576036 -35708276 + Lx7 LINE L1 4036 7367 -329 1 1230 603 0 0 0 chr13 84576130 84576197 -35708115 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 1230 770 322 128 39 chr13 84578182 84578566 -35705746 + LFSINE_Vert SINE SINE 6 423 -36 1 1230 4017 39 6 14 chr13 84579749 84580246 -35704066 + L1Md_F3 LINE L1 6091 6583 -1 1 1230 33795 35 0 0 chr13 84580600 84586209 -35698103 + L1Md_T LINE L1 1 5589 -297 1 1230 8882 11 0 0 chr13 84586209 84587204 -35697108 + L1Md_T LINE L1 5590 6584 -1 1 1230 267 277 95 38 chr13 84587344 84587449 -35696863 + B2_Mm2 SINE B2 1 111 -84 1 1230 369 0 0 0 chr13 84587480 84587521 -35696791 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1230 567 29 0 0 chr13 84588163 84588232 -35696080 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1230 1746 215 43 19 chr13 84589708 84590125 -35694187 - Lx5 LINE L1 -3 7047 6621 1 1230 1075 197 42 0 chr13 84590140 84590333 -35693979 + B3 SINE B2 2 202 -14 1 1230 1546 203 75 6 chr13 84590783 84591130 -35693182 - ORR1D1 LTR MaLR -3 371 1 1 1230 465 19 0 0 chr13 84593656 84593710 -35690602 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1230 495 0 0 0 chr13 84593771 84593826 -35690486 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1230 489 313 75 0 chr13 84593841 84593975 -35690337 + RSINE1 SINE B4 2 145 -20 1 1230 558 98 0 0 chr13 84593975 84594057 -35690255 + (CA)n Simple_repeat Simple_repeat 1 82 0 1 1230 329 338 116 69 chr13 84594182 84594414 -35689898 + L2b LINE L2 3133 3375 0 1 1230 230 258 38 85 chr13 84595112 84595218 -35689094 + MLT1J LTR MaLR 77 177 -335 1 1230 256 385 0 11 chr13 84595256 84595348 -35688964 + MLT1J LTR MaLR 246 336 -176 1 1230 2526 127 0 3 chr13 84595594 84595981 -35688331 + L1_Mur1 LINE L1 5401 5786 -100 1 1230 5106 235 103 40 chr13 84595981 84596106 -35688206 - Lx9 LINE L1 -2 7642 7520 1 1230 183 80 0 0 chr13 84596106 84596131 -35688181 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1230 5106 235 103 40 chr13 84596131 84597691 -35686621 - Lx9 LINE L1 -125 7519 5850 1 1230 186 43 0 0 chr13 84597714 84597737 -35686575 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1230 2955 58 7 46 chr13 84597792 84598225 -35686087 - L1_Mus2 LINE L1 -23 6543 6128 1 1230 2133 135 0 33 chr13 84598231 84598568 -35685744 + ORR1A3 LTR MaLR 1 326 0 1 1230 8170 227 63 49 chr13 84598568 84601686 -35682626 - L1_Rod LINE L1 -104 5743 2583 1 1230 378 0 0 0 chr13 84601885 84601927 -35682385 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1230 202 29 57 0 chr13 84602077 84602112 -35682200 + (TTTTTA)n Simple_repeat Simple_repeat 5 41 0 1 1230 542 201 83 69 chr13 84602113 84602257 -35682055 - B1_Mus2 SINE Alu 0 150 5 1 1230 11266 143 22 9 chr13 84602257 84605011 -35679301 - Lx LINE L1 -134 6520 3740 1 1230 195 42 0 0 chr13 84605022 84605046 -35679266 + (TTTTA)n Simple_repeat Simple_repeat 5 28 0 1 1230 22 0 0 0 chr13 84605046 84605068 -35679244 + AT_rich Low_complexity Low_complexity 1 22 0 1 1230 4126 94 14 9 chr13 84605068 84605708 -35678604 - L1Md_A LINE L1 -31 6966 5940 1 1230 5860 31 57 0 chr13 84605708 84606413 -35677899 - L1Md_T LINE L1 0 6582 5838 1 1230 27537 116 16 18 chr13 84606413 84612050 -35672262 - L1Md_A LINE L1 -674 6323 675 1 1230 987 84 0 0 chr13 84612107 84612250 -35672062 + L1_Mus2 LINE L1 6423 6565 -1 1 1230 428 246 14 29 chr13 84612298 84612436 -35671876 - L1Md_A LINE L1 -5813 803 668 1 1230 4076 122 20 0 chr13 84612488 84613270 -35671042 - L1_Mur1 LINE L1 -2169 3717 2927 1 1230 1130 143 19 0 chr13 84613265 84613474 -35670838 - MusHAL1 LINE L1 -893 1819 1607 1 1230 524 207 126 0 chr13 84613529 84613640 -35670672 + B1_Mur3 SINE Alu 12 136 -13 1 1230 225 0 0 0 chr13 84613641 84613666 -35670646 + (TTAA)n Simple_repeat Simple_repeat 3 27 0 1 1230 495 118 0 0 chr13 84613908 84613984 -35670328 + (GA)n Simple_repeat Simple_repeat 1 76 0 1 1230 23 0 0 0 chr13 84614955 84614978 -35669334 + AT_rich Low_complexity Low_complexity 1 23 0 1 1230 517 327 24 5 chr13 84615497 84615709 -35668603 + B3 SINE B2 1 216 0 1 1230 252 59 0 0 chr13 84616747 84616781 -35667531 + (TA)n Simple_repeat Simple_repeat 2 35 0 1 1230 446 61 15 0 chr13 84616781 84616846 -35667466 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1230 879 252 9 69 chr13 84616874 84617091 -35667221 + MER58A DNA MER1_type 4 207 -17 1 1230 404 312 8 31 chr13 84617574 84617703 -35666609 + MLT1A0 LTR MaLR 238 363 -2 1 1230 21 0 0 0 chr13 84617874 84617895 -35666417 + AT_rich Low_complexity Low_complexity 1 21 0 1 1230 738 243 0 0 chr13 84618046 84618186 -35666126 + B1_Mur1 SINE Alu 2 141 -8 1 1230 32 57 0 0 chr13 84618221 84618274 -35666038 + AT_rich Low_complexity Low_complexity 1 53 0 1 1230 4001 184 60 45 chr13 84618286 84619180 -35665132 + RMER13B LTR ERVK 1 908 0 1 1230 400 295 32 0 chr13 84619192 84619287 -35665025 + PB1D10 SINE Alu 12 109 -8 1 1230 535 318 8 0 chr13 84619374 84619500 -35664812 + RSINE1 SINE B4 3 129 -36 1 1230 754 109 0 0 chr13 84620188 84620298 -35664014 + Lx LINE L1 6089 6198 -456 1 1230 2886 117 28 2 chr13 84620431 84620867 -35663445 + Lx LINE L1 6208 6654 0 1 1230 321 26 0 0 chr13 84620886 84620924 -35663388 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 1230 5988 80 1 11 chr13 84621575 84622426 -35661886 - L1_Mus2 LINE L1 -2 6564 5722 1 1230 36275 32 1 0 chr13 84623033 84630285 -35654027 - L1Md_T LINE L1 0 6585 1 1 1230 697 262 218 59 chr13 84630422 84630661 -35653651 - ORR1D2 LTR MaLR 0 370 94 1 1230 1438 249 65 91 chr13 84630662 84631156 -35653156 - RLTR28B LTR ERVL 0 481 1 1 1230 258 215 173 25 chr13 84631159 84631240 -35653072 - ORR1D2 LTR MaLR -276 94 2 1 1230 198 0 0 0 chr13 84631896 84631918 -35652394 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1230 919 282 59 22 chr13 84632106 84632650 -35651662 - L1MD LINE L1 -922 5224 4661 1 1230 228 264 27 14 chr13 84632656 84632729 -35651583 + (CATA)n Simple_repeat Simple_repeat 2 75 0 1 1230 375 274 7 95 chr13 84632859 84632996 -35651316 + MLT1C LTR MaLR 15 139 -251 1 1230 396 331 145 57 chr13 84633058 84633212 -35651100 + MLT1C LTR MaLR 123 283 -184 1 1230 2092 175 111 40 chr13 84633212 84633755 -35650557 - RLTR31A_Mm LTR ERVK 0 584 4 1 1230 396 331 145 57 chr13 84633755 84633917 -35650395 + MLT1C LTR MaLR 284 467 0 1 1230 666 228 44 7 chr13 84634084 84634221 -35650091 + B1_Mur1 SINE Alu 6 147 -2 1 1230 194 128 24 49 chr13 84634222 84634304 -35650008 + A-rich Low_complexity Low_complexity 5 84 0 1 1230 2800 216 71 17 chr13 84636383 84637027 -35647285 + Lx6 LINE L1 6782 7460 0 1 1230 267 54 0 0 chr13 84637537 84637574 -35646738 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1230 206 211 0 0 chr13 84637747 84637785 -35646527 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1230 8102 59 8 0 chr13 84637938 84639011 -35645301 + L1Md_F2 LINE L1 4505 5586 -297 1 1230 8276 37 2 0 chr13 84639012 84640002 -35644310 + L1Md_F2 LINE L1 5588 6579 -3 1 1230 2273 169 21 0 chr13 84640200 84640578 -35643734 + ORR1B1 LTR MaLR 1 386 -8 1 1230 3141 244 22 27 chr13 84640907 84641674 -35642638 + Lx5 LINE L1 6266 7028 -22 1 1230 360 0 0 0 chr13 84641674 84641714 -35642598 + (TAAAG)n Simple_repeat Simple_repeat 2 41 0 1 1230 1138 307 56 13 chr13 84641870 84642338 -35641974 + Lx8 LINE L1 6979 7466 -7 1 1230 990 26 0 0 chr13 84642598 84642715 -35641597 + (TC)n Simple_repeat Simple_repeat 2 118 0 1 1230 733 320 51 7 chr13 84642750 84643024 -35641288 - B4 SINE B4 -6 286 1 1 1230 262 265 0 0 chr13 84643030 84643079 -35641233 - PB1D10 SINE Alu -32 85 37 1 1230 3513 154 31 8 chr13 84643127 84644106 -35640206 + L1VL4 LINE L1 204 1203 -2356 1 1230 20934 45 0 0 chr13 84644105 84646848 -35637464 - L1Md_T LINE L1 -1250 4633 1892 1 1230 7697 30 7 1 chr13 84646828 84647790 -35636522 + L1Md_T LINE L1 4619 5586 -297 1 1230 8443 31 1 0 chr13 84647790 84648801 -35635511 + L1Md_T LINE L1 5587 6582 0 1 1230 22340 153 23 5 chr13 84648804 84651864 -35632448 + L1_Mus4 LINE L1 1548 4662 -1221 1 1230 354 98 0 0 chr13 84651864 84651915 -35632397 + (CAA)n Simple_repeat Simple_repeat 1 51 0 1 1230 22340 136 13 4 chr13 84651915 84653867 -35630445 + L1_Mus4 LINE L1 4663 6636 0 1 1230 27 62 0 0 chr13 84655416 84655464 -35628848 + AT_rich Low_complexity Low_complexity 1 48 0 1 1230 743 50 10 0 chr13 84655492 84655592 -35628720 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 1 1230 21 0 0 0 chr13 84656008 84656029 -35628283 + AT_rich Low_complexity Low_complexity 1 21 0 1 1230 29 60 0 0 chr13 84656056 84656106 -35628206 + AT_rich Low_complexity Low_complexity 1 50 0 1 1230 243 0 0 0 chr13 84656691 84656718 -35627594 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 2 1230 2332 293 37 35 chr13 84656718 84657757 -35626555 - L1_Mur3 LINE L1 -183 5697 4657 2 1230 225 226 0 0 chr13 84658429 84658482 -35625830 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1230 363 279 25 43 chr13 84658614 84658775 -35625537 - Charlie4a DNA MER1_type -251 257 100 2 1230 251 305 0 0 chr13 84659633 84659692 -35624620 + MIR3 SINE MIR 118 176 -32 2 1230 2598 246 71 11 chr13 84660923 84661658 -35622654 + Lx7 LINE L1 6562 7340 -356 2 1230 3499 102 41 7 chr13 84661677 84662257 -35622055 - Lx3C LINE L1 -293 5593 4994 2 1230 1722 110 4 15 chr13 84662255 84662522 -35621790 + Lx3C LINE L1 5612 5875 -1101 2 1230 2243 183 46 18 chr13 84662522 84662978 -35621334 + Lx3C LINE L1 6505 6973 -3 2 1230 24807 118 11 11 chr13 84663135 84664315 -35619997 + L1_Mus2 LINE L1 1774 2957 -2926 2 1230 4130 58 35 0 chr13 84664315 84664834 -35619478 + L1Md_F2 LINE L1 6045 6581 -1 2 1230 24807 118 11 11 chr13 84664834 84666610 -35617702 + L1_Mus2 LINE L1 2958 4731 -1152 2 1230 243 0 0 0 chr13 84666610 84666637 -35617675 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1230 24807 97 8 8 chr13 84666637 84668471 -35615841 + L1_Mus2 LINE L1 4732 6565 -1 2 1230 1015 218 94 38 chr13 84668573 84668892 -35615420 + Lx7 LINE L1 7360 7696 0 2 1230 513 300 34 34 chr13 84669453 84669629 -35614683 - MLT2B2 LTR ERVL -325 190 15 2 1230 363 385 87 94 chr13 84670216 84670498 -35613814 + LTR16A LTR ERVL 9 283 -168 2 1230 189 74 0 0 chr13 84670498 84670525 -35613787 + (CGAAA)n Simple_repeat Simple_repeat 5 31 0 2 1230 363 385 87 94 chr13 84670525 84670678 -35613634 + LTR16A LTR ERVL 284 441 -10 2 1230 2041 254 98 31 chr13 84671497 84672168 -35612144 - Lx7 LINE L1 -2 7694 6979 2 1230 282 56 0 0 chr13 84672168 84672204 -35612108 + (TC)n Simple_repeat Simple_repeat 2 37 0 2 153 2347 101 20 0 chr13 84672209 84672564 -35611748 - L1_Mus4 LINE L1 -3 6633 6272 2 1231 3249 251 79 21 chr13 84672564 84673527 -35610785 - Lx7 LINE L1 -887 6809 5791 2 1231 4292 199 14 26 chr13 84673518 84674464 -35609848 - Lx7 LINE L1 -341 5539 4606 2 1231 927 218 109 0 chr13 84674464 84674675 -35609637 + RMER15 LTR ERVL 342 575 0 2 1231 468 260 244 17 chr13 84674794 84674970 -35609342 - B3 SINE B2 0 216 1 2 1231 3104 55 8 0 chr13 84675416 84675801 -35608511 + RLTR10 LTR ERVK 1 388 -2 2 1231 4206 142 14 15 chr13 84675813 84677134 -35607178 + RLTR10-int LTR ERVK 41 1594 -5987 2 1231 8304 37 0 16 chr13 84677216 84678224 -35606088 + RLTR10-int LTR ERVK 990 1981 -6 2 1231 2741 68 63 0 chr13 84678227 84678592 -35605720 + RLTR10 LTR ERVK 1 388 -2 2 1231 195 129 0 0 chr13 84678667 84678698 -35605614 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1231 201 192 19 0 chr13 84678747 84678799 -35605513 + (TA)n Simple_repeat Simple_repeat 1 53 0 2 1231 7784 48 20 1 chr13 84678812 84679925 -35604387 - L1Md_F2 LINE L1 -2 6580 5447 2 1231 24 0 0 0 chr13 84679925 84679949 -35604363 + AT_rich Low_complexity Low_complexity 1 24 0 2 1231 6394 141 39 27 chr13 84679957 84681085 -35603227 - Lx3B LINE L1 -3 6970 5829 2 1231 812 104 3 0 chr13 84681085 84681214 -35603098 - L1_Mur1 LINE L1 -1279 4867 4735 2 1231 259 276 49 67 chr13 84682372 84682540 -35601772 + MIRb SINE MIR 18 178 -90 2 1231 228 309 24 12 chr13 84682632 84682714 -35601598 + CT-rich Low_complexity Low_complexity 3 85 0 2 1231 1621 139 3 67 chr13 84682715 84683000 -35601312 - ORR1A2 LTR MaLR -58 269 3 2 1231 962 159 62 0 chr13 84683002 84683178 -35601134 - ORR1A2-int LTR MaLR 0 1963 1777 2 1231 203 149 40 13 chr13 84683193 84683268 -35601044 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1231 9328 92 18 8 chr13 84683268 84685497 -35598815 - L1VL4 LINE L1 -1286 2273 23 2 1231 1256 146 8 17 chr13 84685507 84685744 -35598568 - ORR1A2-int LTR MaLR -920 1043 809 2 1231 1200 162 107 8 chr13 84685792 84686034 -35598278 + Lx6 LINE L1 5632 5897 -1563 2 1231 2821 227 186 66 chr13 84686040 84686930 -35597382 + Lx6 LINE L1 6288 7284 -176 2 1231 743 343 127 19 chr13 84687025 84687777 -35596535 + Lx8 LINE L1 6602 7434 -39 2 1231 220 282 0 14 chr13 84687847 84687919 -35596393 + A-rich Low_complexity Low_complexity 5 75 0 2 1231 837 93 0 0 chr13 84689313 84689442 -35594870 + (GA)n Simple_repeat Simple_repeat 1 129 0 2 1231 326 256 67 4 chr13 84689714 84689830 -35594482 + B1F SINE Alu 10 141 -8 2 1231 271 307 0 64 chr13 84689744 84689838 -35594474 + ID_B1 SINE B4 134 221 -3 2 1231 7334 33 5 0 chr13 84690958 84691839 -35592473 + L1Md_F2 LINE L1 5698 6582 0 2 1231 241 214 171 0 chr13 84691959 84692029 -35592283 - L1MA8 LINE L1 -133 6158 6077 2 1231 396 71 0 0 chr13 84692902 84692958 -35591354 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1231 1214 143 0 0 chr13 84692986 84693175 -35591137 + MYSERV16_I-int LTR ERVK 411 599 -1727 2 1231 227 246 114 73 chr13 84693182 84693305 -35591007 + MLT1F2 LTR MaLR 371 498 -62 2 1231 3535 184 19 23 chr13 84693306 84694040 -35590272 + MYSERV16_I-int LTR ERVK 726 1456 -870 2 1231 1066 153 0 0 chr13 84694040 84694203 -35590109 + B2_Mm2 SINE B2 2 164 -31 2 1231 303 93 0 0 chr13 84694203 84694246 -35590066 + (TAAG)n Simple_repeat Simple_repeat 1 43 0 2 1231 1817 174 60 3 chr13 84694283 84694701 -35589611 + MYSERV16_I-int LTR ERVK 1499 1844 -482 2 1231 1394 172 52 19 chr13 84694705 84695013 -35589299 + MYSERV16_I-int LTR ERVK 2001 2318 -8 2 1231 23709 149 25 39 chr13 84695015 84699323 -35584989 - L1_Mus3 LINE L1 -350 6288 1989 2 1231 579 172 10 0 chr13 84699323 84699422 -35584890 - B2_Mm2 SINE B2 -93 102 3 2 1231 23709 149 25 39 chr13 84699422 84700830 -35583482 - L1_Mus3 LINE L1 -350 1988 582 2 1231 225 108 0 0 chr13 84702265 84702302 -35582010 + (GA)n Simple_repeat Simple_repeat 2 38 0 2 1231 275 0 29 0 chr13 84702306 84702341 -35581971 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 2 1231 268 330 48 10 chr13 84703618 84703722 -35580590 - PB1D7 SINE Alu -8 112 5 2 1231 342 0 0 0 chr13 84706462 84706500 -35577812 + (TA)n Simple_repeat Simple_repeat 2 39 0 2 1231 23 33 0 0 chr13 84706987 84707017 -35577295 + AT_rich Low_complexity Low_complexity 1 30 0 2 1231 198 103 0 0 chr13 84710373 84710402 -35573910 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1231 327 78 0 0 chr13 84710403 84710454 -35573858 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 1231 225 94 0 0 chr13 84713166 84713198 -35571114 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1231 259 27 0 0 chr13 84713198 84713235 -35571077 - B1_Mur4 SINE Alu 0 150 114 2 1231 380 315 174 12 chr13 84714808 84714975 -35569337 + MamRep137 DNA TcMar? 250 443 -1 2 1231 315 355 45 6 chr13 84715050 84715206 -35569106 + L2a LINE L2 3265 3426 0 2 1231 566 307 83 22 chr13 84715612 84715792 -35568520 + B4 SINE B4 54 244 -48 2 1231 2625 169 45 68 chr13 84715878 84716461 -35567851 + L1_Mur1 LINE L1 209 1070 -5914 2 1231 1102 57 0 41 chr13 84716461 84716608 -35567704 - B1_Mus2 SINE Alu -5 142 2 2 1231 8609 102 14 4 chr13 84716608 84717956 -35566356 + L1_Mur1 LINE L1 1071 2509 -3377 2 1231 1661 106 0 0 chr13 84717955 84718209 -35566103 + L1_Mur1 LINE L1 4632 4885 -1001 2 1231 4401 185 5 23 chr13 84718209 84719105 -35565207 - L1_Mur2 LINE L1 -657 5220 4342 2 1231 1647 84 102 7 chr13 84719105 84719379 -35564933 + MusHAL1 LINE L1 1941 2240 -472 2 1231 506 220 68 77 chr13 84719463 84719670 -35564642 + L1_Mur3 LINE L1 5270 5474 -406 2 1231 3877 93 7 9 chr13 84720047 84720621 -35563691 - L1_Mur1 LINE L1 -338 5548 4976 2 1231 10733 83 18 1 chr13 84720622 84721684 -35562628 - L1_Mus1 LINE L1 -131 6436 5363 2 1231 5461 34 19 10 chr13 84721684 84722360 -35561952 - L1Md_F3 LINE L1 -1 6583 5902 2 1231 29415 92 31 5 chr13 84722360 84727236 -35557076 - L1_Mus1 LINE L1 -521 5362 339 2 1231 10674 101 11 19 chr13 84727237 84727309 -35557003 - L1_Mur1 LINE L1 -896 4990 4935 2 1231 2518 68 18 12 chr13 84727309 84727649 -35556663 - L1_Mus1 LINE L1 0 6567 6226 2 1231 10674 101 11 19 chr13 84727649 84729233 -35555079 - L1_Mur1 LINE L1 -952 4934 3348 2 1231 1066 109 360 0 chr13 84729230 84729441 -35554871 + Lx3_Mus LINE L1 5560 5846 -40 2 1231 1997 29 16 0 chr13 84729459 84729702 -35554610 + L1Md_F3 LINE L1 6323 6569 -15 2 1231 7708 105 23 3 chr13 84729710 84729792 -35554520 + Lx3_Mus LINE L1 5827 5908 -1101 2 1231 258 32 0 0 chr13 84729792 84729823 -35554489 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1231 7708 105 23 3 chr13 84729823 84730899 -35553413 + Lx3_Mus LINE L1 5909 7007 -2 2 1231 23 0 0 0 chr13 84731045 84731068 -35553244 + AT_rich Low_complexity Low_complexity 1 23 0 2 1231 287 354 73 11 chr13 84731325 84731502 -35552810 - MIRc SINE MIR -24 244 57 2 1231 475 308 52 0 chr13 84732024 84732196 -35552116 + Lx8 LINE L1 6944 7124 -349 2 1231 26 30 0 0 chr13 84732484 84732517 -35551795 + AT_rich Low_complexity Low_complexity 1 33 0 2 1231 1404 45 8 8 chr13 84732952 84733200 -35551112 + (TAGA)n Simple_repeat Simple_repeat 1 248 0 2 1231 273 185 0 0 chr13 84733374 84733439 -35550873 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1231 298 288 118 22 chr13 84734184 84734319 -35549993 + Tigger5 DNA MER2_type 2218 2365 -41 2 1231 252 100 24 48 chr13 84734421 84734477 -35549835 + T-rich Low_complexity Low_complexity 31 84 0 2 1231 1155 76 0 0 chr13 84734477 84734622 -35549690 - B1_Mm SINE Alu -2 145 1 2 1231 252 100 24 48 chr13 84734622 84734649 -35549663 + T-rich Low_complexity Low_complexity 3 30 0 2 1231 219 258 144 0 chr13 84734758 84734855 -35549457 - PB1D9 SINE Alu -7 113 3 2 1231 23 0 0 0 chr13 84735911 84735934 -35548378 + AT_rich Low_complexity Low_complexity 1 23 0 2 1231 400 251 25 160 chr13 84737575 84737626 -35546686 - Lx9 LINE L1 -610 7034 6987 2 1231 189 74 0 0 chr13 84737626 84737653 -35546659 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 1231 400 251 25 160 chr13 84737653 84737764 -35546548 - Lx9 LINE L1 -658 6986 6879 2 1231 1522 102 33 25 chr13 84737764 84738006 -35546306 + L1Md_F2 LINE L1 6321 6564 -18 2 1231 270 0 0 0 chr13 84738015 84738045 -35546267 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1231 400 251 25 160 chr13 84738045 84738108 -35546204 - Lx9 LINE L1 -766 6878 6830 2 1231 369 259 103 93 chr13 84738139 84738343 -35545969 - RMER2 LTR ERV1 -28 539 334 2 1231 1752 274 98 59 chr13 84738594 84739956 -35544356 - Lx9 LINE L1 -812 6832 5252 2 1231 700 282 183 24 chr13 84740018 84740525 -35543787 + Lx9 LINE L1 7057 7644 0 2 1231 226 335 61 102 chr13 84741330 84741526 -35542786 - ORR1D2 LTR MaLR -138 232 45 2 1231 2774 136 80 2 chr13 84741781 84742246 -35542066 - Lx2 LINE L1 -6 6991 6491 2 1231 2081 200 24 17 chr13 84742274 84742292 -35542020 - Lx4B LINE L1 0 7058 7043 2 1231 279 0 0 0 chr13 84742292 84742323 -35541989 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2 1231 2081 200 24 17 chr13 84742323 84742767 -35541545 - Lx4B LINE L1 -16 7042 6593 2 1231 8605 109 55 16 chr13 84742770 84744905 -35539407 + L1VL4 LINE L1 1 2237 -1322 2 1231 1179 178 72 14 chr13 84744896 84745118 -35539194 - Lx4B LINE L1 -507 6551 6317 2 1231 3002 173 47 35 chr13 84745118 84745752 -35538560 - RLTR26 LTR ERVK 0 642 1 2 1231 1419 209 19 25 chr13 84745752 84746066 -35538246 - Lx4B LINE L1 -736 6322 6011 2 1231 6273 157 19 16 chr13 84746060 84747186 -35537126 - Lx4B LINE L1 -61 5816 4688 2 1231 529 244 94 44 chr13 84747632 84747812 -35536500 + B3A SINE B2 2 190 -8 2 1231 2928 169 11 4 chr13 84748001 84748524 -35535788 - Lx2 LINE L1 -215 5668 5142 2 1231 8208 119 26 24 chr13 84748523 84749863 -35534449 + Lx2 LINE L1 5654 6996 -1 2 1231 297 269 61 96 chr13 84751021 84751136 -35533176 - MIRc SINE MIR -28 240 130 2 1231 484 317 7 47 chr13 84751327 84751476 -35532836 + B1_Mur1 SINE Alu 7 149 0 2 1231 285 128 0 0 chr13 84753611 84753658 -35530654 + (TA)n Simple_repeat Simple_repeat 2 48 0 3 1231 219 317 41 16 chr13 84753840 84753927 -35530385 - B1F2 SINE Alu -21 99 12 3 1231 31 44 0 0 chr13 84754234 84754279 -35530033 + AT_rich Low_complexity Low_complexity 1 45 0 3 1231 285 87 0 68 chr13 84754636 84754710 -35529602 + T-rich Low_complexity Low_complexity 2 70 0 3 1231 2967 38 0 64 chr13 84755198 84755588 -35528724 - RLTR10B2 LTR ERVK 0 365 1 3 1231 429 296 78 29 chr13 84756751 84756956 -35527356 - B3 SINE B2 0 216 2 3 1231 321 318 202 53 chr13 84757185 84757731 -35526581 - L1MB3 LINE L1 -15 6168 5542 3 1231 24 0 0 0 chr13 84759654 84759678 -35524634 + AT_rich Low_complexity Low_complexity 1 24 0 3 1231 267 302 45 71 chr13 84760404 84760531 -35523781 - L1MC4 LINE L1 -3 8039 7913 3 1231 504 0 0 0 chr13 84760531 84760587 -35523725 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 3 1231 267 302 45 71 chr13 84760587 84760726 -35523586 - L1MC4 LINE L1 -130 7912 7780 3 1231 345 287 106 0 chr13 84761008 84761102 -35523210 - PB1 SINE Alu -2 125 22 3 1231 1593 163 71 99 chr13 84761168 84761550 -35522762 + ORR1C1 LTR MaLR 6 376 -2 3 1231 491 307 35 28 chr13 84761777 84761918 -35522394 + RSINE1 SINE B4 11 152 -13 3 1231 306 333 27 33 chr13 84762287 84762470 -35521842 - L1MC4 LINE L1 -949 7093 6912 3 1231 27 0 0 0 chr13 84762833 84762860 -35521452 + AT_rich Low_complexity Low_complexity 1 27 0 3 1231 22 35 0 0 chr13 84763755 84763784 -35520528 + AT_rich Low_complexity Low_complexity 1 29 0 3 1231 180 0 0 0 chr13 84764329 84764349 -35519963 + (TTG)n Simple_repeat Simple_repeat 2 21 0 3 1231 213 222 0 0 chr13 84764350 84764404 -35519908 + (TTTG)n Simple_repeat Simple_repeat 3 56 0 3 1231 405 39 0 0 chr13 84764854 84764905 -35519407 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1231 180 0 0 0 chr13 84765848 84765868 -35518444 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1231 321 277 60 35 chr13 84766538 84766654 -35517658 + L1MEg LINE L1 1825 1943 -4141 3 1231 218 307 0 43 chr13 84766659 84766751 -35517561 + CT-rich Low_complexity Low_complexity 4 91 0 3 1231 504 59 0 0 chr13 84766753 84766821 -35517491 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 1231 210 333 35 23 chr13 84766828 84766914 -35517398 - PB1D10 SINE Alu -30 87 1 3 1231 1030 114 79 17 chr13 84766952 84767130 -35517182 - B2_Mm2 SINE B2 -6 189 1 3 1231 268 111 0 0 chr13 84767137 84767173 -35517139 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 3 1231 660 135 0 0 chr13 84767173 84767284 -35517028 + (TTTC)n Simple_repeat Simple_repeat 1 111 0 3 1231 1032 122 0 0 chr13 84767284 84767432 -35516880 - B1_Mus1 SINE Alu 0 148 1 3 1231 404 313 61 12 chr13 84767867 84768032 -35516280 - B4A SINE B4 -119 173 1 3 1231 596 333 112 4 chr13 84768638 84768906 -35515406 + MLT1A0 LTR MaLR 2 298 -67 3 1231 203 0 68 45 chr13 84769117 84769161 -35515151 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 3 1231 23 33 0 0 chr13 84769173 84769203 -35515109 + AT_rich Low_complexity Low_complexity 1 30 0 3 1231 863 240 14 24 chr13 84769235 84769448 -35514864 + Lx7 LINE L1 7213 7423 -273 3 1231 689 199 6 0 chr13 84769522 84769693 -35514619 + GA-rich Low_complexity Low_complexity 1 172 0 3 1231 456 35 0 0 chr13 84769763 84769821 -35514491 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1231 276 30 0 0 chr13 84769821 84769853 -35514459 + (GA)n Simple_repeat Simple_repeat 2 34 0 3 1231 1459 280 9 24 chr13 84770882 84771306 -35513006 + Lx7 LINE L1 6916 7333 -363 3 1231 396 0 0 0 chr13 84771345 84771389 -35512923 + (TC)n Simple_repeat Simple_repeat 1 44 0 3 1231 299 113 19 0 chr13 84771404 84771457 -35512855 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1231 29 47 0 0 chr13 84771493 84771536 -35512776 + AT_rich Low_complexity Low_complexity 1 43 0 3 1231 262 333 53 53 chr13 84773129 84773281 -35511031 - MER63A DNA AcHobo -49 161 10 3 1231 3507 149 51 46 chr13 84773921 84774590 -35509722 - Lx3B LINE L1 -3 6970 6299 3 1231 410 59 0 0 chr13 84774590 84774641 -35509671 + L1_Mur1 LINE L1 4476 4526 -1360 3 1231 575 164 0 76 chr13 84774641 84774760 -35509552 - B1_Mus2 SINE Alu -37 110 1 3 1231 459 132 0 0 chr13 84774769 84774845 -35509467 - L1_Mus1 LINE L1 -565 6002 5927 3 1231 623 35 12 0 chr13 84774845 84774931 -35509381 + L1_Mus1 LINE L1 6481 6567 0 3 1231 21 0 0 0 chr13 84774986 84775007 -35509305 + AT_rich Low_complexity Low_complexity 1 21 0 3 1231 1054 89 0 0 chr13 84775016 84775151 -35509161 + B1_Mm SINE Alu 3 137 -10 3 1231 792 32 0 0 chr13 84775151 84775246 -35509066 + (GAAA)n Simple_repeat Simple_repeat 2 96 0 3 1231 3379 111 23 4 chr13 84775248 84775772 -35508540 + L1_Mur1 LINE L1 4673 5206 -680 3 1231 23 0 0 0 chr13 84775831 84775854 -35508458 + AT_rich Low_complexity Low_complexity 1 23 0 3 1231 224 336 54 31 chr13 84776184 84776313 -35507999 - L2a LINE L2 -37 3389 3258 3 1231 848 258 97 3 chr13 84780809 84781109 -35503203 + L1M3 LINE L1 4610 4937 -1203 3 1231 1123 293 56 14 chr13 84781140 84781425 -35502887 + L1MA5A LINE L1 5489 5775 -522 3 1231 439 45 30 0 chr13 84781425 84781491 -35502821 + (TA)n Simple_repeat Simple_repeat 2 69 0 3 1231 1123 293 56 14 chr13 84781491 84781648 -35502664 + L1MA5A LINE L1 5776 5950 -347 3 1231 500 248 82 8 chr13 84782232 84782354 -35501958 - Lx8 LINE L1 -523 6950 6820 3 1231 247 368 45 36 chr13 84783076 84783095 -35501217 + ID SINE ID 64 83 -141 3 1231 420 276 51 0 chr13 84783095 84783193 -35501119 + B1F SINE Alu 1 103 -46 3 1231 1493 225 194 21 chr13 84783997 84784465 -35499847 - RMER15 LTR ERVL 0 575 27 3 1231 23 0 0 0 chr13 84785443 84785466 -35498846 + AT_rich Low_complexity Low_complexity 1 23 0 3 1231 257 167 0 18 chr13 84785951 84786006 -35498306 + CT-rich Low_complexity Low_complexity 3 56 0 3 1231 273 380 123 0 chr13 84786906 84787077 -35497235 + MIR SINE MIR 21 212 -50 3 1231 280 184 30 23 chr13 84787279 84787360 -35496952 - B1F SINE Alu -2 118 40 3 1231 1137 118 0 0 chr13 84788313 84788491 -35495821 + (TTC)n Simple_repeat Simple_repeat 3 180 0 3 1231 1352 286 95 56 chr13 84788491 84789142 -35495170 - Lx8 LINE L1 -73 7400 6722 3 1231 552 298 44 6 chr13 84789198 84789380 -35494932 - Lx8 LINE L1 -1107 6366 6178 3 1231 21 0 0 0 chr13 84790680 84790701 -35493611 + AT_rich Low_complexity Low_complexity 1 21 0 3 1231 878 48 8 0 chr13 84791261 84791385 -35492927 + (TG)n Simple_repeat Simple_repeat 2 126 0 3 1231 233 299 218 42 chr13 84792647 84792800 -35491512 + MLT1E2 LTR MaLR 3 183 -322 3 1231 446 49 16 0 chr13 84793080 84793141 -35491171 + (TTTC)n Simple_repeat Simple_repeat 3 64 0 3 1231 1828 160 3 13 chr13 84793155 84793471 -35490841 - Lx3A LINE L1 -4 6977 6665 3 1231 20777 103 24 54 chr13 84793477 84793836 -35490476 - L1_Mur1 LINE L1 -854 5032 4678 3 1231 735 71 0 0 chr13 84793836 84793934 -35490378 + (TCTA)n Simple_repeat Simple_repeat 4 101 0 3 1231 228 35 0 0 chr13 84793934 84793962 -35490350 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1231 896 97 7 15 chr13 84793962 84794098 -35490214 - B1_Mus1 SINE Alu -11 137 3 3 1231 20777 103 24 54 chr13 84794098 84795330 -35488982 - L1_Mur1 LINE L1 -1209 4677 3493 3 1231 321 26 0 0 chr13 84795330 84795368 -35488944 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 3 1231 20777 103 24 54 chr13 84795368 84795403 -35488909 - L1_Mur1 LINE L1 -2394 3492 3485 3 1231 1368 67 0 0 chr13 84795403 84795583 -35488729 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 3 1231 20777 103 24 54 chr13 84795583 84797533 -35486779 - L1_Mur1 LINE L1 -2402 3484 1561 3 1231 234 62 0 0 chr13 84797533 84797565 -35486747 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 3 1231 12667 82 24 5 chr13 84797568 84799871 -35484441 - L1Md_F2 LINE L1 -19 6563 4192 3 1231 1589 99 28 4 chr13 84799869 84800123 -35484189 - L1_Mur1 LINE L1 -4324 1562 1303 3 153 12952 208 53 11 chr13 84800127 84803975 -35480337 + Lx5 LINE L1 3029 7050 0 3 1232 247 234 15 15 chr13 84804422 84804487 -35479825 - L1M2 LINE L1 -660 5640 5576 3 1232 352 272 4 19 chr13 84804486 84804637 -35479675 + L1_Mur3 LINE L1 2268 2416 -3431 3 1232 264 314 101 27 chr13 84804653 84804872 -35479440 - Zaphod2 DNA Tip100 -580 2944 2710 3 1232 509 288 70 6 chr13 84804898 84805069 -35479243 + B3A SINE B2 1 182 -16 3 1232 4427 12 0 0 chr13 84805155 84805648 -35478664 - MT2_Mm LTR ERVL 0 493 1 3 1232 2959 74 32 0 chr13 84806272 84806679 -35477633 + BGLII LTR ERVK 1 420 -1 3 1232 292 288 73 12 chr13 84806780 84806945 -35477367 - L1M4 LINE L1 -677 5501 5327 3 1232 351 316 94 48 chr13 84807005 84807378 -35476934 - L1M4 LINE L1 -890 5256 4867 3 1232 507 95 0 0 chr13 84807436 84807510 -35476802 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 3 1232 5659 161 17 3 chr13 84807511 84808472 -35475840 - Lx LINE L1 -10 6644 5671 3 1232 5290 26 0 0 chr13 84808468 84809088 -35475224 - L1Md_T LINE L1 -835 5048 4429 3 1232 4814 20 0 0 chr13 84809088 84809645 -35474667 + L1Md_T LINE L1 5030 5586 -297 3 1232 8460 31 0 0 chr13 84809645 84810639 -35473673 + L1Md_T LINE L1 5587 6580 -2 3 1232 22027 178 28 7 chr13 84810642 84815026 -35469286 - L1_Mur1 LINE L1 -206 5680 1203 3 1232 2658 165 116 6 chr13 84815019 84815556 -35468756 - L1VL4 LINE L1 -5513 789 194 3 1232 657 158 16 40 chr13 84815715 84815840 -35468472 - MT2C_Mm LTR ERVL -78 397 276 3 1232 291 28 0 0 chr13 84815881 84815917 -35468395 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1232 606 338 97 41 chr13 84816002 84816509 -35467803 - L1M4 LINE L1 -1697 4449 3915 3 1232 228 163 0 0 chr13 84816680 84816723 -35467589 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 3 1232 358 148 16 32 chr13 84816727 84816790 -35467522 + HAL1-3A_ME LINE L1 1973 2034 -824 3 1232 207 170 21 21 chr13 84818156 84818204 -35466108 + T-rich Low_complexity Low_complexity 5 52 0 3 1232 360 325 0 0 chr13 84819944 84820027 -35464285 - B1F SINE Alu -66 83 1 3 1232 25 51 0 0 chr13 84820119 84820158 -35464154 + AT_rich Low_complexity Low_complexity 1 39 0 3 1232 245 188 0 12 chr13 84822021 84822107 -35462205 + (TA)n Simple_repeat Simple_repeat 2 86 0 3 1232 1593 127 0 0 chr13 84822180 84822409 -35461903 + L1VL4 LINE L1 194 422 -5880 3 1232 6466 84 22 6 chr13 84822411 84823512 -35460800 + L1VL2 LINE L1 786 1903 -1712 3 1232 3565 157 29 0 chr13 84823509 84824272 -35460040 + Lx2 LINE L1 5200 5988 -1009 3 1232 3490 108 16 6 chr13 84824268 84824779 -35459533 + Lx2 LINE L1 6133 6648 -349 3 1232 1329 165 0 0 chr13 84824774 84824998 -35459314 + Lx LINE L1 6427 6650 -4 4 1232 859 258 40 44 chr13 84825016 84825243 -35459069 + MTD LTR MaLR 68 293 -126 4 1232 994 265 68 6 chr13 84825237 84825560 -35458752 + MTD-int LTR MaLR 914 1256 -2 4 1232 1433 254 30 33 chr13 84825562 84825929 -35458383 + MTD LTR MaLR 1 366 -53 4 1232 880 296 9 35 chr13 84825946 84826177 -35458135 - B4 SINE B4 -62 230 6 4 1232 22 0 0 0 chr13 84830049 84830071 -35454241 + GC_rich Low_complexity Low_complexity 1 22 0 4 1232 460 312 58 7 chr13 84831717 84831872 -35452440 - LTR16E2 LTR ERVL 0 568 406 4 1232 525 58 0 0 chr13 84832854 84832923 -35451389 + (TTTTG)n Simple_repeat Simple_repeat 2 70 0 4 1232 206 213 0 51 chr13 84833145 84833224 -35451088 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 4 1232 306 272 21 21 chr13 84833330 84833424 -35450888 - MIR SINE MIR -165 97 4 4 1232 306 67 0 0 chr13 84833786 84833831 -35450481 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1232 242 257 28 14 chr13 84835394 84835465 -35448847 - MLT1J LTR MaLR -317 195 124 4 1232 21 0 0 0 chr13 84835554 84835575 -35448737 + AT_rich Low_complexity Low_complexity 1 21 0 4 1232 285 345 76 15 chr13 84835932 84836129 -35448183 - B3 SINE B2 -5 211 3 4 1232 182 156 22 0 chr13 84836645 84836690 -35447622 + (CTAA)n Simple_repeat Simple_repeat 2 47 0 4 1232 540 0 0 0 chr13 84837859 84837919 -35446393 + (GA)n Simple_repeat Simple_repeat 1 60 0 4 1232 438 20 0 0 chr13 84837996 84838047 -35446265 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1232 207 88 0 0 chr13 84839293 84839327 -35444985 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1232 225 292 46 0 chr13 84839548 84839613 -35444699 - AmnSINE1 SINE SINE 0 575 508 4 1232 266 176 132 0 chr13 84840715 84840783 -35443529 + Lx9 LINE L1 7373 7449 -195 4 1232 327 167 22 22 chr13 84840820 84840912 -35443400 + Lx9 LINE L1 7552 7643 -1 4 1232 205 261 0 0 chr13 84841616 84841662 -35442650 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 4 1232 2542 68 3 12 chr13 84841914 84842255 -35442057 - ORR1A1 LTR MaLR -8 338 1 4 1232 993 261 68 0 chr13 84842617 84842897 -35441415 - Lx8 LINE L1 -358 7115 6817 4 1232 427 282 42 17 chr13 84843550 84843669 -35440643 + B1_Mur2 SINE Alu 13 134 -15 4 1232 1125 95 0 0 chr13 84843767 84843915 -35440397 + B1_Mus1 SINE Alu 1 148 0 4 1232 180 97 0 0 chr13 84843932 84843963 -35440349 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1232 848 231 13 12 chr13 84844844 84845042 -35439270 - ORR1D1 LTR MaLR -1 373 178 4 1232 21 0 0 0 chr13 84845190 84845211 -35439101 + AT_rich Low_complexity Low_complexity 1 21 0 4 1232 228 278 0 0 chr13 84846326 84846380 -35437932 + (TTA)n Simple_repeat Simple_repeat 3 56 0 4 1232 470 235 28 37 chr13 84846389 84846545 -35437767 + Lx7 LINE L1 7558 7695 -1 4 1232 259 232 22 34 chr13 84847183 84847293 -35437019 + C-rich Low_complexity Low_complexity 1 108 0 4 1232 4820 211 33 182 chr13 84847294 84849381 -35434931 + L1_Mur3 LINE L1 1650 3428 -2452 4 1232 28174 121 10 7 chr13 84849382 84851087 -35433225 + L1_Mus3 LINE L1 1408 3131 -2752 4 1232 198 0 0 0 chr13 84851087 84851109 -35433203 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1232 28174 118 8 6 chr13 84851109 84854613 -35429699 + L1_Mus3 LINE L1 3132 6632 -6 4 1232 621 156 21 43 chr13 84854610 84854751 -35429561 + L1_Mur3 LINE L1 3412 3549 -2328 4 1232 569 297 43 92 chr13 84854751 84855033 -35429279 + RLTR20D LTR ERVK 1 268 -300 4 1232 445 301 84 13 chr13 84855013 84855075 -35429237 + RLTR20D LTR ERVK 386 447 -104 4 1232 667 62 21 0 chr13 84855075 84855172 -35429140 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 1232 445 301 84 13 chr13 84855172 84855264 -35429048 + RLTR20D LTR ERVK 448 551 0 4 1232 6737 176 64 30 chr13 84855267 84856810 -35427502 + L1_Mur3 LINE L1 3545 5140 -740 4 1232 866 256 82 4 chr13 84856792 84857035 -35427277 - Lx8 LINE L1 -619 6854 6593 4 1232 886 18 9 9 chr13 84857047 84857160 -35427152 + (TTC)n Simple_repeat Simple_repeat 2 114 0 4 1232 251 126 0 128 chr13 84857163 84857259 -35427053 + T-rich Low_complexity Low_complexity 13 96 0 4 1232 1106 89 0 20 chr13 84857259 84857408 -35426904 - B1_Mus1 SINE Alu -2 146 1 4 1232 251 126 0 128 chr13 84857408 84857420 -35426892 + T-rich Low_complexity Low_complexity 2 12 0 4 1232 21 36 0 0 chr13 84857484 84857512 -35426800 + AT_rich Low_complexity Low_complexity 1 28 0 4 1232 202 231 0 0 chr13 84857549 84857588 -35426724 + GA-rich Low_complexity Low_complexity 2 40 0 4 1232 382 331 112 16 chr13 84857588 84857846 -35426466 + L1MD LINE L1 4781 5063 -1083 4 1232 21 57 0 0 chr13 84857977 84858012 -35426300 + AT_rich Low_complexity Low_complexity 1 35 0 4 1232 5156 164 9 8 chr13 84858345 84859836 -35424476 + L1VL4 LINE L1 204 1695 -1864 4 1232 33070 70 9 6 chr13 84859832 84865075 -35419237 + L1Md_F2 LINE L1 331 5586 -297 4 1232 7995 47 2 7 chr13 84865075 84866072 -35418240 + L1Md_F2 LINE L1 5587 6578 -4 4 1232 7009 130 12 16 chr13 84866093 84867306 -35417006 + L1VL4 LINE L1 1684 2892 -667 4 1232 27080 133 19 9 chr13 84867281 84872766 -35411546 + L1_Mus3 LINE L1 899 6429 -209 4 1232 2701 39 48 0 chr13 84872766 84873096 -35411216 + ORR1A1 LTR MaLR 1 346 0 4 1232 7197 95 27 8 chr13 84873096 84873292 -35411020 + L1_Mus3 LINE L1 6430 6632 -6 4 1232 1959 128 117 70 chr13 84874071 84874525 -35409787 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1232 22 0 0 0 chr13 84875079 84875101 -35409211 + AT_rich Low_complexity Low_complexity 1 22 0 4 1232 1400 252 136 73 chr13 84875257 84875958 -35408354 + Lx7 LINE L1 6963 7688 -8 4 1232 1848 177 6 200 chr13 84876032 84876662 -35407650 - RMER6C LTR ERVK 0 690 183 4 1232 7279 208 18 16 chr13 84876685 84878118 -35406194 - Lx5 LINE L1 0 7050 5615 4 1232 1051 162 59 11 chr13 84878119 84878306 -35406006 - RMER6C LTR ERVK -494 196 1 4 1232 328 243 14 28 chr13 84878753 84878825 -35405487 - PB1D7 SINE Alu -21 99 29 4 1232 2985 55 3 5 chr13 84879278 84879708 -35404604 + L1Md_F2 LINE L1 6192 6582 0 4 1232 375 202 0 0 chr13 84879719 84879818 -35404494 + GA-rich Low_complexity Low_complexity 4 102 0 4 1232 303 279 178 65 chr13 84879915 84880084 -35404228 + B3A SINE B2 7 194 -4 4 1232 237 257 13 26 chr13 84881547 84881623 -35402689 + CT-rich Low_complexity Low_complexity 5 79 0 4 1232 308 298 95 11 chr13 84881785 84881880 -35402432 + RSINE1 SINE B4 8 110 -55 4 1232 510 67 0 0 chr13 84881901 84881976 -35402336 + (CA)n Simple_repeat Simple_repeat 2 76 0 4 1232 420 77 0 0 chr13 84883552 84883617 -35400695 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1232 510 57 0 0 chr13 84884254 84884324 -35399988 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1232 337 212 0 15 chr13 84884472 84884539 -35399773 - HAL1-3A_ME LINE L1 -815 2043 1978 4 1232 476 308 73 29 chr13 84884554 84884691 -35399621 - RSINE1 SINE B4 -2 163 21 4 1232 839 144 19 6 chr13 84885135 84885296 -35399016 - Lx3A LINE L1 -7 6974 6812 4 1232 557 218 62 24 chr13 84885342 84885495 -35398817 - B3 SINE B2 -5 190 23 4 1232 495 0 0 0 chr13 84885496 84885551 -35398761 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 4 1232 679 286 75 8 chr13 84885584 84885824 -35398488 - Lx6 LINE L1 -26 7434 7179 4 1232 1156 68 0 0 chr13 84886685 84886833 -35397479 + B1_Mus1 SINE Alu 1 148 0 4 1232 27 0 0 0 chr13 84886874 84886901 -35397411 + AT_rich Low_complexity Low_complexity 1 27 0 4 1232 272 364 0 0 chr13 84886954 84887031 -35397281 - ID4 SINE ID -2 81 5 4 1232 275 0 29 0 chr13 84887069 84887104 -35397208 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 1232 226 271 115 23 chr13 84887463 84887550 -35396762 + MARNA DNA Mariner 90 184 -402 4 1232 301 321 49 21 chr13 84887491 84887634 -35396678 - MARNA DNA Mariner -120 466 320 4 1232 257 270 78 102 chr13 84887712 84887840 -35396472 - MARNA DNA Mariner -385 201 77 4 1232 255 31 0 0 chr13 84888541 84888573 -35395739 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 4 1232 559 98 0 21 chr13 84890767 84890861 -35393451 + (TTTC)n Simple_repeat Simple_repeat 2 93 0 4 1232 21 57 0 0 chr13 84892355 84892390 -35391922 + AT_rich Low_complexity Low_complexity 1 35 0 4 1232 216 235 0 0 chr13 84894442 84894510 -35389802 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 1232 307 0 47 0 chr13 84895176 84895219 -35389093 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1232 465 110 0 0 chr13 84898409 84898482 -35385830 + (CCA)n Simple_repeat Simple_repeat 2 74 0 4 1232 731 67 19 0 chr13 84899316 84899421 -35384891 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 4 1232 234 0 0 0 chr13 84901691 84901717 -35382595 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1232 411 21 0 0 chr13 84901952 84902000 -35382312 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1232 204 40 0 0 chr13 84903009 84903034 -35381278 + (CATTT)n Simple_repeat Simple_repeat 4 28 0 4 1232 288 0 0 0 chr13 84903497 84903529 -35380783 + (TA)n Simple_repeat Simple_repeat 1 32 0 4 1232 183 80 0 0 chr13 84903564 84903589 -35380723 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 4 1232 694 221 0 0 chr13 84904457 84904588 -35379724 + B1_Mur2 SINE Alu 6 136 -13 4 1232 327 85 0 0 chr13 84904588 84904635 -35379677 + (CCAA)n Simple_repeat Simple_repeat 1 47 0 4 1232 650 293 20 35 chr13 84904717 84904915 -35379397 + B3 SINE B2 15 209 -7 4 1232 670 306 17 6 chr13 84904928 84905130 -35379182 + B4A SINE B4 80 282 -10 4 1232 369 0 0 0 chr13 84905131 84905172 -35379140 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1232 25 0 0 0 chr13 84905173 84905198 -35379114 + AT_rich Low_complexity Low_complexity 1 25 0 4 1232 201 210 0 0 chr13 84905957 84906019 -35378293 + T-rich Low_complexity Low_complexity 1 62 0 4 1232 1135 51 0 0 chr13 84909862 84910000 -35374312 + B1_Mm SINE Alu 1 138 -9 4 1232 813 21 0 0 chr13 84910000 84910095 -35374217 + (GAA)n Simple_repeat Simple_repeat 2 96 0 4 1232 189 107 0 0 chr13 84910228 84910256 -35374056 + (ATG)n Simple_repeat Simple_repeat 3 30 0 4 1232 432 97 0 0 chr13 84910256 84910318 -35373994 + (GGA)n Simple_repeat Simple_repeat 3 64 0 4 1232 462 61 0 0 chr13 84911623 84911689 -35372623 + (GGCTG)n Simple_repeat Simple_repeat 4 69 0 4 1232 212 0 36 0 chr13 84913533 84913561 -35370751 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1232 360 0 0 0 chr13 84913661 84913701 -35370611 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1232 3294 41 5 0 chr13 84914168 84914562 -35369750 + MTA_Mm LTR MaLR 1 396 0 5 1232 422 367 61 0 chr13 84915833 84915980 -35368332 + RSINE1 SINE B4 8 163 -2 5 1232 489 34 0 0 chr13 84916348 84916407 -35367905 + (TCCA)n Simple_repeat Simple_repeat 1 59 0 5 1232 2763 74 0 3 chr13 84916669 84917034 -35367278 + L1_Mus1 LINE L1 6198 6561 -6 5 1232 365 263 73 39 chr13 84918289 84918467 -35365845 - Lx8 LINE L1 0 7473 7290 5 1232 2782 41 0 94 chr13 84918687 84919090 -35365222 + RLTR10B2 LTR ERVK 1 365 0 5 1232 376 325 38 50 chr13 84920559 84920718 -35363594 + MIR SINE MIR 33 189 -73 5 1232 487 0 0 31 chr13 84921128 84921193 -35363119 + (TCTG)n Simple_repeat Simple_repeat 1 63 0 5 1232 277 301 65 0 chr13 84922186 84922279 -35362033 - MIRm SINE MIR -113 163 65 5 1232 198 103 0 0 chr13 84923475 84923504 -35360808 + (GAA)n Simple_repeat Simple_repeat 2 30 0 5 1232 7238 73 32 7 chr13 84925610 84926865 -35357447 - L1_Mus2 LINE L1 0 6566 5302 5 1232 569 169 22 0 chr13 84926944 84927080 -35357232 - Lx LINE L1 0 6654 6516 5 1232 232 350 46 46 chr13 84927159 84927375 -35356937 - MIR SINE MIR 0 262 47 5 1232 317 320 75 85 chr13 84928760 84928972 -35355340 + L2 LINE L2 405 614 -2805 5 1232 253 315 184 18 chr13 84928972 84929140 -35355172 + L2 LINE L2 2005 2200 -1219 5 1232 239 401 73 6 chr13 84929506 84929684 -35354628 + L2 LINE L2 2606 2795 -624 5 1232 315 0 0 0 chr13 84929955 84929990 -35354322 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 5 1232 476 317 43 10 chr13 84930081 84930288 -35354024 - B3 SINE B2 0 216 3 5 1232 213 39 0 0 chr13 84930556 84930582 -35353730 + (TTA)n Simple_repeat Simple_repeat 2 27 0 5 1232 2057 144 3 37 chr13 84931278 84931652 -35352660 - Lx2B LINE L1 -3 6997 6637 5 1232 31 44 0 0 chr13 84933188 84933233 -35351079 + AT_rich Low_complexity Low_complexity 1 45 0 5 1233 783 123 0 0 chr13 84935876 84935998 -35348314 + (TTTTC)n Simple_repeat Simple_repeat 2 123 0 5 1233 7807 78 23 4 chr13 84936044 84937209 -35347103 - L1_Mus3 LINE L1 0 6638 5405 5 1233 874 278 8 8 chr13 84937291 84937538 -35346774 + Lx5 LINE L1 6766 7012 -38 5 1233 185 0 40 0 chr13 84937544 84937569 -35346743 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 1233 189 0 0 0 chr13 84938456 84938477 -35345835 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1233 189 0 0 0 chr13 84938831 84938852 -35345460 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1233 328 295 34 10 chr13 84939807 84939907 -35344405 + PB1 SINE Alu 5 106 -21 5 1233 377 310 0 17 chr13 84942763 84942878 -35341434 + PB1D7 SINE Alu 6 118 -2 5 1233 22 0 0 0 chr13 84944569 84944591 -35339721 + AT_rich Low_complexity Low_complexity 1 22 0 5 1233 258 105 0 0 chr13 84944850 84944888 -35339424 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1233 30 77 0 0 chr13 84945858 84945923 -35338389 + AT_rich Low_complexity Low_complexity 1 65 0 5 1233 24 0 0 0 chr13 84946745 84946769 -35337543 + AT_rich Low_complexity Low_complexity 1 24 0 5 1233 217 324 0 0 chr13 84946837 84946905 -35337407 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 1233 348 168 57 137 chr13 84946913 84947037 -35337275 + HAL1-3A_ME LINE L1 1979 2092 -766 5 1233 320 308 59 8 chr13 84947372 84947490 -35336822 - ORR1E LTR MaLR -226 133 10 5 1233 23 78 0 0 chr13 84947756 84947807 -35336505 + AT_rich Low_complexity Low_complexity 1 51 0 5 1233 369 0 0 0 chr13 84947926 84947967 -35336345 + (CA)n Simple_repeat Simple_repeat 1 41 0 5 1233 305 266 13 0 chr13 84948201 84948280 -35336032 + MTEb LTR MaLR 296 375 -4 5 1233 673 203 176 28 chr13 84948600 84948782 -35335530 + B3 SINE B2 1 209 -7 5 1233 23 0 0 0 chr13 84948917 84948940 -35335372 + AT_rich Low_complexity Low_complexity 1 23 0 5 1233 1128 78 0 0 chr13 84948940 84949081 -35335231 - B1_Mus2 SINE Alu -5 142 2 5 1233 8071 148 43 15 chr13 84949095 84949285 -35335027 - Lx4A LINE L1 0 7058 6861 5 1233 392 0 21 0 chr13 84949285 84949333 -35334979 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 5 1233 8071 148 43 15 chr13 84949333 84949449 -35334863 - Lx4A LINE L1 -198 6860 6749 5 1233 198 0 0 0 chr13 84949449 84949471 -35334841 + (TGGGGG)n Simple_repeat Simple_repeat 2 23 0 5 1233 8071 138 30 11 chr13 84949471 84950749 -35333563 - Lx4A LINE L1 -310 6748 5425 5 1233 28 29 0 0 chr13 84950830 84950865 -35333447 + AT_rich Low_complexity Low_complexity 1 35 0 5 1233 32780 69 6 6 chr13 84950994 84956225 -35328087 + L1Md_F2 LINE L1 261 5589 -297 5 1233 7911 51 7 0 chr13 84956225 84957213 -35327099 + L1Md_F2 LINE L1 5590 6584 -1 5 1233 324 241 250 14 chr13 84957213 84957463 -35326849 + MER33 DNA MER1_type 21 324 0 5 1233 360 0 0 0 chr13 84957698 84957738 -35326574 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 1233 850 194 14 0 chr13 84957738 84957877 -35326435 - B1_Mur4 SINE Alu -9 141 1 5 1233 23 0 0 0 chr13 84958099 84958122 -35326190 + AT_rich Low_complexity Low_complexity 1 23 0 5 1233 24 0 0 0 chr13 84958715 84958739 -35325573 + AT_rich Low_complexity Low_complexity 1 24 0 5 1233 1132 250 27 92 chr13 84958744 84959079 -35325233 + ORR1D1 LTR MaLR 1 313 -61 5 1233 1593 185 122 3 chr13 84959080 84959416 -35324896 + ORR1C2 LTR MaLR 1 376 -8 5 1233 41 48 0 0 chr13 84959452 84959514 -35324798 + AT_rich Low_complexity Low_complexity 1 62 0 5 1233 363 364 40 7 chr13 84959602 84959754 -35324558 + B3A SINE B2 36 192 -6 5 1233 789 31 0 0 chr13 84960733 84960829 -35323483 + (TC)n Simple_repeat Simple_repeat 1 96 0 5 1233 269 339 0 0 chr13 84961290 84961349 -35322963 + PB1D10 SINE Alu 1 59 -58 5 1233 324 0 0 0 chr13 84961365 84961401 -35322911 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1233 183 162 0 0 chr13 84961530 84961567 -35322745 + (CATATA)n Simple_repeat Simple_repeat 3 39 0 5 1233 367 24 0 0 chr13 84962058 84962099 -35322213 + L1Md_F3 LINE L1 5546 5586 -297 5 1233 8275 40 0 1 chr13 84962099 84963098 -35321214 + L1Md_F3 LINE L1 5587 6584 0 5 1233 228 35 0 0 chr13 84963694 84963723 -35320589 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1233 1141 76 0 0 chr13 84963727 84963872 -35320440 - B1_Mus2 SINE Alu -1 146 2 5 1233 432 0 0 0 chr13 84963872 84963920 -35320392 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1233 573 42 0 0 chr13 84963920 84963991 -35320321 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 1233 2467 66 0 0 chr13 84967294 84967613 -35316699 - L1Md_F2 LINE L1 -1202 4681 4363 5 1233 6752 62 18 6 chr13 84967614 84968508 -35315804 + L1Md_F2 LINE L1 4679 5583 -300 5 1233 7362 71 8 6 chr13 84968516 84969497 -35314815 + L1Md_F2 LINE L1 5588 6570 -12 5 1233 378 0 0 0 chr13 84969521 84969563 -35314749 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 5 1233 19455 160 28 7 chr13 84969652 84973746 -35310566 + Lx LINE L1 450 4630 -1256 5 1233 240 35 0 0 chr13 84973746 84973775 -35310537 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1233 19455 169 26 7 chr13 84973775 84974163 -35310149 + Lx LINE L1 4631 5028 -858 5 1233 38217 10 2 7 chr13 84974157 84979759 -35304553 + L1Md_A LINE L1 21 5586 -297 5 1233 8510 14 18 0 chr13 84979759 84980737 -35303575 + L1Md_A LINE L1 5587 6582 0 5 1233 6036 159 30 10 chr13 84980778 84982374 -35301938 + Lx LINE L1 5011 6645 -9 5 1233 235 239 26 34 chr13 84982478 84982595 -35301717 - L1MD LINE L1 -3194 2952 2837 5 1233 6610 132 14 10 chr13 84982645 84983741 -35300571 - Lx3_Mus LINE L1 0 7009 5910 5 1233 758 145 0 7 chr13 84983741 84983880 -35300432 + CT-rich Low_complexity Low_complexity 2 139 0 5 1233 6231 78 14 70 chr13 84983883 84984900 -35299412 - Lx3_Mus LINE L1 -1060 5921 4965 5 1233 246 330 90 0 chr13 84985012 84985112 -35299200 + PB1D9 SINE Alu 4 112 -8 5 1233 230 258 0 31 chr13 84985116 84985180 -35299132 + GA-rich Low_complexity Low_complexity 2 63 0 5 1233 279 297 13 51 chr13 84985185 84985263 -35299049 + B4A SINE B4 217 291 -1 5 1233 657 56 28 0 chr13 84985278 84985385 -35298927 + (TAGA)n Simple_repeat Simple_repeat 1 110 0 5 1233 1703 113 0 0 chr13 84987419 84987675 -35296637 + L1_Mm LINE L1 3928 4183 -1700 5 1233 36327 37 2 3 chr13 84987675 84992851 -35291461 + L1Md_A LINE L1 416 5586 -297 5 1233 8901 9 0 0 chr13 84992851 84993847 -35290465 + L1Md_A LINE L1 5587 6582 0 5 1233 14421 45 1 1 chr13 84993847 84995618 -35288694 + L1_Mm LINE L1 3923 5692 -191 5 1233 4630 37 0 5 chr13 84995595 84996169 -35288143 - L1_Mm LINE L1 -1039 4844 4274 5 1233 6933 57 5 5 chr13 84996169 84997064 -35287248 + L1Md_F2 LINE L1 5687 6581 -1 5 1233 2045 112 6 0 chr13 84997068 84997379 -35286933 + L1_Mm LINE L1 4153 4465 -1418 5 1233 270 0 0 0 chr13 84997571 84997601 -35286711 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 5 1233 309 26 0 0 chr13 84997935 84997973 -35286339 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 5 1233 25 31 0 0 chr13 84998069 84998101 -35286211 + AT_rich Low_complexity Low_complexity 1 32 0 5 1233 504 348 55 55 chr13 84998793 84999064 -35285248 + B4A SINE B4 7 277 -15 5 1233 420 304 42 42 chr13 85001365 85001509 -35282803 - MER45A DNA Tip100 -34 144 1 1 1233 2855 98 31 14 chr13 85002313 85002757 -35281555 + RLTR44E LTR ERVK 1 452 0 2 1233 1267 269 94 14 chr13 85003068 85003505 -35280807 - Lx6 LINE L1 -26 7434 6963 3 1233 500 0 17 0 chr13 85003548 85003608 -35280704 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1233 899 161 0 6 chr13 85003608 85003789 -35280523 + GA-rich Low_complexity Low_complexity 1 180 0 5 1233 468 0 0 0 chr13 85003790 85003842 -35280470 + (GAAA)n Simple_repeat Simple_repeat 1 52 0 6 1233 235 178 22 0 chr13 85003874 85003919 -35280393 - Lx6 LINE L1 -893 6567 6522 3 1233 4219 199 27 16 chr13 85003923 85005122 -35279190 - Lx6 LINE L1 -1187 6273 5053 3 1233 1454 275 30 86 chr13 85005168 85005666 -35278646 + RMER19C LTR ERVK 140 609 -2 7 1233 3167 207 25 31 chr13 85005668 85006080 -35278232 - Lx6 LINE L1 -825 5052 4626 3 1233 258 32 0 0 chr13 85006080 85006111 -35278201 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 8 1233 3167 207 25 31 chr13 85006111 85006449 -35277863 - Lx6 LINE L1 -1252 4625 4307 3 1233 5094 214 64 11 chr13 85006453 85007597 -35276715 - Lx5 LINE L1 0 7050 5846 9 1233 598 117 21 0 chr13 85007574 85007668 -35276644 - L1_Mur2 LINE L1 -307 5570 5475 1 1233 8053 199 62 173 chr13 85007662 85009014 -35275298 - Lx6 LINE L1 -1621 4256 2914 3 1233 1872 216 15 20 chr13 85009014 85009411 -35274901 + RLTR12B LTR ERVK 2 396 -132 1 1233 8053 199 62 173 chr13 85009411 85009577 -35274735 - Lx6 LINE L1 -1621 2913 2747 3 1233 3292 22 20 7 chr13 85009577 85009983 -35274329 - IAPLTR2a LTR ERVK 0 411 1 1 1233 8053 199 62 173 chr13 85009983 85010652 -35273660 - Lx6 LINE L1 -3131 2746 2051 3 1233 459 125 0 0 chr13 85010652 85010724 -35273588 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1233 8053 200 64 149 chr13 85010724 85011798 -35272514 - Lx6 LINE L1 -3827 2050 980 3 1233 7475 168 35 1 chr13 85011804 85011934 -35272378 + Lx5 LINE L1 1910 2049 -3828 1 1233 264 59 0 0 chr13 85011934 85011968 -35272344 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1233 7475 168 35 1 chr13 85011968 85013247 -35271065 + Lx5 LINE L1 2050 3367 -2510 1 1233 6435 191 29 13 chr13 85013241 85015475 -35268837 + Lx5 LINE L1 4760 7047 -3 1 1233 1404 289 109 28 chr13 85015662 85017057 -35267255 - L1MA5 LINE L1 -280 6020 4512 1 1233 1512 214 62 25 chr13 85017619 85017974 -35266338 + MTC LTR MaLR 54 421 0 1 1233 2939 170 13 2 chr13 85018062 85018587 -35265725 - Lx2 LINE L1 0 6997 6467 1 1233 7601 69 3 22 chr13 85018600 85019869 -35264443 - L1_Mus1 LINE L1 0 6567 5325 1 1233 1295 139 141 9 chr13 85019870 85020136 -35264176 + L1_Mus2 LINE L1 6281 6582 0 2 1233 25470 146 29 38 chr13 85020737 85025852 -35258460 - L1_Mus1 LINE L1 -561 5322 264 1 1233 2617 152 20 11 chr13 85025844 85026296 -35258016 - Lx2 LINE L1 -521 6476 6021 1 1233 478 102 77 0 chr13 85026297 85026385 -35257927 - Lx2A1 LINE L1 -1176 5805 5712 2 1233 928 143 0 0 chr13 85026377 85026524 -35257788 + Lx2A1 LINE L1 5556 5702 -181 2 1233 309 89 0 0 chr13 85028059 85028104 -35256208 + (CAAAA)n Simple_repeat Simple_repeat 1 45 0 2 1233 771 231 40 63 chr13 85029130 85029352 -35254960 - ORR1D1 LTR MaLR 0 374 158 2 1233 497 16 16 0 chr13 85029359 85029421 -35254891 + (TAGA)n Simple_repeat Simple_repeat 2 64 0 2 1233 233 184 328 107 chr13 85029445 85029567 -35254745 + B1F SINE Alu 1 149 0 2 1233 650 230 12 108 chr13 85029559 85029757 -35254555 - ORR1D1 LTR MaLR -190 180 1 2 1233 1120 255 60 21 chr13 85029757 85030111 -35254201 - MTD LTR MaLR -41 366 14 2 1233 517 316 31 58 chr13 85030479 85030704 -35253608 - ORR1E LTR MaLR -23 336 118 2 1233 1045 74 0 0 chr13 85030774 85030909 -35253403 - B1_Mus1 SINE Alu -13 135 1 2 1233 266 222 126 17 chr13 85031752 85031871 -35252441 - Lx7 LINE L1 0 7696 7565 2 1233 3531 269 54 11 chr13 85031895 85032881 -35251431 - Lx7 LINE L1 -278 7418 6391 2 1233 269 348 25 42 chr13 85033251 85033371 -35250941 - MLT1J LTR MaLR -202 310 193 3 1233 197 388 38 0 chr13 85033559 85033639 -35250673 + L2a LINE L2 3302 3384 -42 3 1233 651 112 0 0 chr13 85034247 85034345 -35249967 + (TCCCC)n Simple_repeat Simple_repeat 4 101 0 3 1233 230 0 33 0 chr13 85034690 85034720 -35249592 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1233 342 233 0 0 chr13 85034887 85034973 -35249339 + (TA)n Simple_repeat Simple_repeat 1 86 0 3 1233 334 276 11 44 chr13 85035942 85036033 -35248279 + PB1D10 SINE Alu 6 93 -24 3 1233 183 310 101 22 chr13 85036212 85036301 -35248011 + MIRb SINE MIR 159 254 -14 3 1233 1563 240 191 40 chr13 85036698 85037305 -35247007 + RMER6D LTR ERVK 8 706 -14 3 1233 227 234 88 38 chr13 85037444 85037524 -35246788 - Lx8 LINE L1 -9 7464 7381 3 1233 770 259 10 0 chr13 85037587 85037784 -35246528 + L1_Mur3 LINE L1 4165 4363 -1517 3 1233 2174 269 117 28 chr13 85038019 85038146 -35246166 - RMER1C Other Other -3 1339 1202 4 1233 213 39 0 0 chr13 85038146 85038172 -35246140 + (GGA)n Simple_repeat Simple_repeat 2 27 0 4 1233 2174 270 112 25 chr13 85038172 85038940 -35245372 - RMER1C Other Other -141 1201 47 4 1233 402 299 9 9 chr13 85038954 85039062 -35245250 - PB1D10 SINE Alu -3 114 7 4 1233 21 0 0 0 chr13 85039635 85039656 -35244656 + AT_rich Low_complexity Low_complexity 1 21 0 4 1233 286 121 30 0 chr13 85040984 85041050 -35243262 + CT-rich Low_complexity Low_complexity 2 69 0 4 1233 38 89 0 0 chr13 85041050 85041151 -35243161 + AT_rich Low_complexity Low_complexity 1 101 0 4 1233 282 116 0 0 chr13 85041177 85041220 -35243092 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1233 429 121 0 0 chr13 85041229 85041312 -35243000 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 4 1233 3087 35 0 0 chr13 85041780 85042149 -35242163 - L1Md_T LINE L1 -1 6581 6213 4 1233 342 0 0 0 chr13 85045528 85045566 -35238746 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1233 22 0 0 0 chr13 85046148 85046170 -35238142 + AT_rich Low_complexity Low_complexity 1 22 0 5 1233 599 136 0 9 chr13 85046499 85046610 -35237702 + (TA)n Simple_repeat Simple_repeat 2 111 0 5 1233 612 303 10 43 chr13 85046859 85047077 -35237235 + B3A SINE B2 2 213 -3 5 1233 1766 30 13 0 chr13 85048564 85048799 -35235513 + MTA_Mm-int LTR MaLR 861 1098 0 5 1233 2721 38 6 0 chr13 85048799 85049139 -35235173 + MTA_Mm LTR MaLR 1 342 -54 5 1233 25 75 0 0 chr13 85049251 85049304 -35235008 + AT_rich Low_complexity Low_complexity 1 53 0 5 1233 674 303 15 15 chr13 85050474 85050813 -35233499 + L1MA4 LINE L1 5684 6012 -144 5 1233 213 121 0 0 chr13 85051236 85051269 -35233043 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1233 261 118 0 0 chr13 85052068 85052119 -35232193 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 5 1233 4947 23 0 5 chr13 85052132 85052711 -35231601 - L1Md_A LINE L1 0 6582 6007 5 1233 281 77 0 0 chr13 85052745 85052784 -35231528 + L1Md_F2 LINE L1 595 633 -5986 5 1233 27830 63 4 3 chr13 85052762 85058071 -35226241 + L1Md_F2 LINE L1 304 5589 -297 5 1233 8028 47 1 5 chr13 85058073 85059068 -35225244 + L1Md_F2 LINE L1 5592 6582 -3 5 1233 5363 74 55 0 chr13 85059866 85060595 -35223717 - L1_Mus3 LINE L1 -6 6632 5864 6 1233 450 159 35 0 chr13 85060595 85060689 -35223623 + L1_Mm LINE L1 5195 5291 -586 6 1233 259 293 0 12 chr13 85061036 85061119 -35223193 + Lx8 LINE L1 5819 5900 -1573 6 1233 290 316 136 13 chr13 85061655 85061809 -35222503 + Arthur1A DNA Tip100 1 173 -4 6 1233 343 317 103 73 chr13 85062204 85062602 -35221710 + L1MEg LINE L1 476 885 -5199 6 1233 924 232 39 5 chr13 85062758 85062966 -35221346 - MTD LTR MaLR -9 410 196 6 1233 355 202 0 48 chr13 85062916 85063020 -35221292 - BC1_Mm scRNA scRNA -16 136 38 6 1233 936 253 42 26 chr13 85062984 85063248 -35221064 - MTC LTR MaLR -153 268 1 6 1233 261 0 0 0 chr13 85063459 85063488 -35220824 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1233 3193 6 0 0 chr13 85063617 85063974 -35220338 - L1Md_A LINE L1 0 6582 6226 6 1233 23 33 0 0 chr13 85063996 85064026 -35220286 + AT_rich Low_complexity Low_complexity 1 30 0 7 1233 1312 358 81 11 chr13 85064357 85065276 -35219036 - Lx8 LINE L1 -147 7326 6344 7 1233 581 258 49 29 chr13 85065313 85065513 -35218799 + ORR1D2 LTR MaLR 1 168 -161 7 1234 271 160 0 39 chr13 85065835 85065887 -35218425 - MT2B2 LTR ERVL 0 584 535 7 1234 488 220 10 0 chr13 85065917 85066017 -35218295 + MT2B2 LTR ERVL 398 498 -86 7 1234 1141 91 0 6 chr13 85066071 85066237 -35218075 - L1_Mus1 LINE L1 -2 6565 6401 7 1234 2518 116 26 0 chr13 85066237 85066617 -35217695 + L1_Mm LINE L1 4549 4938 -945 7 1234 390 282 19 160 chr13 85066617 85066773 -35217539 - MT2A LTR ERVL -450 134 1 7 1234 246 32 0 0 chr13 85066950 85066981 -35217331 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1234 432 0 0 0 chr13 85066981 85067029 -35217283 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1234 531 331 6 41 chr13 85067034 85067204 -35217108 - B3A SINE B2 -32 166 3 8 1234 23 33 0 0 chr13 85067216 85067246 -35217066 + AT_rich Low_complexity Low_complexity 1 30 0 8 1234 220 206 16 0 chr13 85067418 85067426 -35216886 + (TTTA)n Simple_repeat Simple_repeat 2 9 0 8 1234 423 0 0 0 chr13 85067426 85067473 -35216839 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1234 220 206 16 0 chr13 85067473 85067527 -35216785 + (TTTA)n Simple_repeat Simple_repeat 3 57 0 8 1234 4606 152 42 49 chr13 85067528 85068865 -35215447 - L1_Mus2 LINE L1 -2 6979 5698 8 1234 2841 86 3 0 chr13 85068865 85069238 -35215074 - L1_Mm LINE L1 -10 5873 5500 8 1234 4721 104 43 48 chr13 85069234 85069982 -35214330 - L1VL2 LINE L1 -5485 850 107 8 1234 391 277 28 56 chr13 85071672 85071779 -35212533 + B1_Mur1 SINE Alu 46 149 0 8 1234 22 0 0 0 chr13 85072034 85072056 -35212256 + AT_rich Low_complexity Low_complexity 1 22 0 8 1234 22 35 0 0 chr13 85072824 85072853 -35211459 + AT_rich Low_complexity Low_complexity 1 29 0 9 1234 7262 45 2 2 chr13 85073207 85074097 -35210215 - L1Md_F2 LINE L1 0 6582 5693 9 1234 2176 88 0 28 chr13 85074556 85074873 -35209439 + L1Md_F2 LINE L1 6262 6569 -13 9 1234 22 0 0 0 chr13 85074873 85074895 -35209417 + AT_rich Low_complexity Low_complexity 1 22 0 9 1234 529 327 6 69 chr13 85074939 85075113 -35209199 + RSINE1 SINE B4 3 165 0 9 1234 274 318 30 91 chr13 85074947 85075144 -35209168 + B2_Mm2 SINE B2 11 195 0 9 1234 796 219 108 15 chr13 85075325 85075520 -35208792 + B3 SINE B2 4 216 0 9 1234 258 278 12 6 chr13 85075708 85075878 -35208434 + CT-rich Low_complexity Low_complexity 2 172 0 9 1234 428 358 88 28 chr13 85075898 85076260 -35208052 + L1MD2 LINE L1 560 943 -5604 9 1234 5607 95 6 23 chr13 85076260 85077020 -35207292 - RLTR13C2 LTR ERVK 0 808 60 9 1234 3293 34 3 0 chr13 85077020 85077404 -35206908 + IAPEY_LTR LTR ERVK 1 385 0 1 1234 5607 95 6 23 chr13 85077404 85077465 -35206847 - RLTR13C2 LTR ERVK -749 59 1 9 1234 1948 259 86 37 chr13 85077817 85078412 -35205900 + RLTR40 LTR ERVK 2 601 -216 1 1234 315 49 0 0 chr13 85078412 85078453 -35205859 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1234 1948 259 86 37 chr13 85078453 85078554 -35205758 + RLTR40 LTR ERVK 602 731 -86 1 1234 3810 194 47 91 chr13 85079355 85080304 -35204008 - RMER13B LTR ERVK 0 908 1 1 1234 272 250 10 98 chr13 85080559 85080661 -35203651 - RMER2 LTR ERV1 -139 428 336 1 1234 396 0 0 0 chr13 85081368 85081412 -35202900 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1 1234 497 277 107 52 chr13 85081676 85081984 -35202328 + L1MD LINE L1 2948 3272 -2874 1 1234 262 360 47 18 chr13 85082384 85082849 -35201463 + L1MD LINE L1 3667 4148 -1998 1 1234 12251 152 212 83 chr13 85082950 85085072 -35199240 + L1Md_T LINE L1 1245 3915 -1968 1 1234 489 260 134 32 chr13 85085072 85085339 -35198973 + MTD LTR MaLR 48 361 -58 1 1234 12251 152 212 83 chr13 85085339 85085563 -35198749 + L1Md_T LINE L1 3916 4199 -1684 1 1234 1199 48 0 0 chr13 85085563 85085709 -35198603 - B1_Mm SINE Alu 0 147 2 1 1234 12251 152 212 83 chr13 85085709 85086940 -35197372 + L1Md_T LINE L1 4200 5586 -297 1 1234 8401 37 0 0 chr13 85086940 85087936 -35196376 + L1Md_T LINE L1 5587 6582 0 1 1234 184 120 40 0 chr13 85089155 85089205 -35195107 + (CAAA)n Simple_repeat Simple_repeat 4 55 0 1 1234 450 261 200 0 chr13 85090344 85090474 -35193838 + RMER20A LTR ERVK 361 516 0 1 1234 428 363 11 22 chr13 85090558 85090741 -35193571 - B3A SINE B2 -4 194 14 1 1234 366 271 18 27 chr13 85090991 85091101 -35193211 + Lx8 LINE L1 7233 7341 -132 1 1234 883 89 8 0 chr13 85091273 85091397 -35192915 + B2_Mm2 SINE B2 40 164 -31 1 1234 2051 102 0 16 chr13 85091518 85091837 -35192475 - L1Md_F2 LINE L1 0 6582 6269 1 1234 204 122 0 0 chr13 85091968 85092009 -35192303 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1234 444 176 21 42 chr13 85092140 85092235 -35192077 - MTC LTR MaLR 0 421 329 1 1234 475 314 29 0 chr13 85092328 85092465 -35191847 - ID_B1 SINE B4 0 224 84 1 1234 195 184 0 0 chr13 85095177 85095215 -35189097 + (TACTG)n Simple_repeat Simple_repeat 2 39 0 1 1234 21 0 0 0 chr13 85096134 85096155 -35188157 + AT_rich Low_complexity Low_complexity 1 21 0 1 1234 2779 28 1 1 chr13 85096390 85096723 -35187589 + L1Md_T LINE L1 5268 5586 -297 1 1234 8421 29 2 0 chr13 85096723 85097716 -35186596 + L1Md_T LINE L1 5587 6581 -1 1 1234 2268 272 168 24 chr13 85098512 85099973 -35184339 + Lx6 LINE L1 5477 7425 -35 1 1234 741 308 6 0 chr13 85100058 85100214 -35184098 - RSINE1 SINE B4 0 165 9 1 1234 603 208 56 0 chr13 85100910 85101035 -35183277 + URR1B DNA MER1_type 89 220 -5 1 1234 21066 5 0 1 chr13 85101068 85103460 -35180852 + L1Md_A LINE L1 3196 5586 -297 1 1234 8967 5 0 0 chr13 85103460 85104456 -35179856 + L1Md_A LINE L1 5587 6582 0 1 1234 3970 232 42 20 chr13 85104583 85105632 -35178680 + Lx9 LINE L1 6571 7642 -2 1 1234 34 24 0 0 chr13 85106026 85106067 -35178245 + AT_rich Low_complexity Low_complexity 1 41 0 1 1234 195 129 0 0 chr13 85106382 85106413 -35177899 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1234 207 0 0 0 chr13 85107133 85107156 -35177156 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1234 436 331 31 0 chr13 85107701 85107831 -35176481 + RSINE1 SINE B4 3 136 -29 1 1234 219 170 0 0 chr13 85107832 85107879 -35176433 + CT-rich Low_complexity Low_complexity 3 49 0 1 1234 226 323 32 0 chr13 85108947 85109040 -35175272 - MLT1C LTR MaLR -3 502 407 1 1234 311 276 101 35 chr13 85109051 85109220 -35175092 - MLT1C LTR MaLR -124 343 164 1 1234 17878 94 8 21 chr13 85109459 85112812 -35171500 - L1Md_A LINE L1 -2180 3703 396 1 1234 4199 235 69 6 chr13 85114545 85116045 -35168267 - Lx5 LINE L1 -181 6869 5248 1 1234 16006 132 106 7 chr13 85116046 85121137 -35163175 - L1Md_F2 LINE L1 -3 6579 503 1 1234 1206 189 0 0 chr13 85121137 85121370 -35162942 - L1Md_F2 LINE L1 -5990 626 394 1 1234 468 221 0 0 chr13 85121372 85121476 -35162836 - L1_Mur2 LINE L1 -618 5262 5159 1 1234 2939 190 13 18 chr13 85121479 85122149 -35162163 - L1_Mur2 LINE L1 -1109 4768 4102 1 1234 1724 257 86 6 chr13 85122257 85122735 -35161577 + RMER5 LTR ERV1 5 520 -14 1 1234 365 0 22 0 chr13 85122747 85122792 -35161520 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 1 1234 511 298 16 87 chr13 85123049 85123233 -35161079 + MER20 DNA MER1_type 1 171 -48 1 1234 1059 93 7 7 chr13 85123354 85123506 -35160806 + L1Md_F LINE L1 30 181 -6338 1 1234 369 207 57 16 chr13 85125613 85125736 -35158576 + Lx9 LINE L1 7517 7644 0 1 1234 30838 94 6 12 chr13 85125755 85131143 -35153169 + L1Md_F2 LINE L1 273 5586 -297 1 1234 7502 68 9 2 chr13 85131143 85132120 -35152192 + L1Md_F2 LINE L1 5587 6570 -12 1 1234 186 43 0 0 chr13 85132159 85132182 -35152130 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1234 1099 221 118 14 chr13 85132336 85132637 -35151675 - ORR1B1 LTR MaLR -25 369 70 1 1234 1453 226 76 25 chr13 85132637 85133073 -35151239 - Lx9 LINE L1 -198 7446 6989 1 1234 207 51 45 106 chr13 85133077 85133143 -35151169 + T-rich Low_complexity Low_complexity 2 63 0 1 1234 2575 235 62 15 chr13 85133156 85133833 -35150479 - Lx9 LINE L1 -628 7016 6308 1 1234 1502 220 31 20 chr13 85133931 85134448 -35149864 - Lx9 LINE L1 -1573 6071 5513 1 1234 510 211 0 36 chr13 85134589 85134727 -35149585 - Lx9 LINE L1 -959 4888 4756 1 1234 455 235 149 0 chr13 85135010 85135205 -35149107 + L1MA4 LINE L1 5690 5917 -383 1 1234 353 102 0 17 chr13 85135217 85135277 -35149035 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 1234 805 318 67 16 chr13 85136166 85136616 -35147696 - Zaphod2 DNA Tip100 -225 3299 2827 1 1234 2175 225 25 38 chr13 85136656 85137178 -35147134 + Lx2B LINE L1 6463 6977 -23 1 1234 1443 196 137 36 chr13 85137179 85137508 -35146804 + ORR1B2 LTR MaLR 6 367 0 1 1234 189 74 0 0 chr13 85137613 85137640 -35146672 + (GA)n Simple_repeat Simple_repeat 1 27 0 1 1234 2506 220 21 34 chr13 85137641 85138209 -35146103 + RLTR31_Mm LTR ERVK 1 561 0 1 1234 22 0 0 0 chr13 85138372 85138394 -35145918 + AT_rich Low_complexity Low_complexity 1 22 0 1 1234 540 297 35 0 chr13 85138394 85138539 -35145773 + MTE2b LTR MaLR 1 150 -229 1 1234 676 20 19 29 chr13 85138539 85138644 -35145668 + (TAGA)n Simple_repeat Simple_repeat 2 105 0 1 1234 272 228 74 65 chr13 85139118 85139226 -35145086 - MER44D DNA MER2_type -377 328 220 1 1234 877 189 32 39 chr13 85139164 85139402 -35144910 - ORR1B1 LTR MaLR -127 199 1 1 1234 5253 212 97 14 chr13 85139402 85140714 -35143598 - ORR1B1-int LTR MaLR 0 1509 89 1 1234 6171 139 21 8 chr13 85140715 85142422 -35141890 - Lx LINE L1 -5 6649 4922 1 1234 1857 201 76 4 chr13 85142909 85143369 -35140943 + L1Md_F LINE L1 578 1070 -5449 1 1234 3483 92 64 19 chr13 85143365 85144004 -35140308 + MusHAL1 LINE L1 240 907 -1805 1 1234 4159 129 59 16 chr13 85144018 85145488 -35138824 - L1VL1 LINE L1 -1977 1721 190 1 1234 15528 178 19 35 chr13 85145559 85149089 -35135223 - Lx LINE L1 -949 4937 1464 1 1234 2773 212 47 92 chr13 85149100 85150131 -35134181 - L1VL2 LINE L1 -5491 844 1 1 1234 567 90 9 123 chr13 85150131 85150245 -35134067 - ORR1B1-int LTR MaLR -1862 101 1 1 1234 1797 172 108 14 chr13 85150245 85150605 -35133707 - ORR1B1 LTR MaLR 0 394 1 1 1234 436 233 99 11 chr13 85151973 85152064 -35132248 + RSINE1 SINE B4 4 102 -63 1 1234 979 280 0 5 chr13 85152408 85152616 -35131696 + ID_B1 SINE B4 11 217 -7 1 1234 346 280 113 18 chr13 85152628 85152857 -35131455 + L1MC4 LINE L1 7342 7592 -450 1 1234 950 146 47 42 chr13 85153552 85153745 -35130567 - B2_Mm2 SINE B2 0 195 2 1 1234 23 0 0 0 chr13 85154356 85154379 -35129933 + AT_rich Low_complexity Low_complexity 1 23 0 1 1234 331 291 72 153 chr13 85154590 85155008 -35129304 - RLTR11A2 LTR ERVK -121 407 1 1 1234 2047 232 55 34 chr13 85155587 85156199 -35128113 - Lx6 LINE L1 -713 6345 5673 1 1234 531 319 17 6 chr13 85156197 85156377 -35127935 + Lx6 LINE L1 6565 6746 -714 1 1234 498 33 0 0 chr13 85156377 85156437 -35127875 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 1234 525 110 30 0 chr13 85156429 85156529 -35127783 + (GGA)n Simple_repeat Simple_repeat 2 104 0 1 1234 1206 289 56 69 chr13 85156590 85157190 -35127122 + Lx6 LINE L1 6455 7406 -54 1 1234 341 176 19 38 chr13 85157286 85157392 -35126920 - Lx LINE L1 -23 7621 7518 1 1234 603 330 87 46 chr13 85157518 85158083 -35126229 + ERVL-E-int LTR ERVL 4589 5281 -476 1 1234 13767 175 15 88 chr13 85158565 85161790 -35122522 - Lx LINE L1 -5 6649 3710 1 1234 286 330 31 10 chr13 85161790 85161888 -35122424 - B1_Mus2 SINE Alu -47 100 1 1 1234 13767 175 15 88 chr13 85161888 85161947 -35122365 - Lx LINE L1 -5 3709 3655 1 1234 2289 52 3 0 chr13 85161947 85162235 -35122077 - L1_Mus1 LINE L1 0 6567 6279 1 1234 13767 176 13 125 chr13 85162235 85163386 -35120926 - Lx LINE L1 -2232 3654 2533 1 1234 822 116 0 0 chr13 85163904 85164051 -35120261 + (TG)n Simple_repeat Simple_repeat 1 147 0 1 1234 2213 151 9 55 chr13 85164110 85164546 -35119766 + RLTR19-int LTR ERVK 5036 5451 -686 1 1234 3546 132 35 10 chr13 85165374 85165969 -35118343 - Lx4A LINE L1 -214 6844 6235 1 1234 308 127 36 0 chr13 85165969 85166024 -35118288 + MTE2b LTR MaLR 323 379 0 1 1234 363 320 154 5 chr13 85166024 85166221 -35118091 + LTR16A1 LTR ERVL 198 424 -32 1 1234 236 247 52 0 chr13 85166221 85166298 -35118014 - Lx7 LINE L1 -1 7695 7615 1 1234 510 17 0 0 chr13 85166309 85166368 -35117944 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1234 1003 213 163 14 chr13 85166387 85166682 -35117630 + Lx7 LINE L1 6776 7114 -582 1 1234 661 361 73 40 chr13 85167299 85167778 -35116534 + MER97c DNA MER1_type? 82 576 -514 1 1234 181 83 56 0 chr13 85167834 85167870 -35116442 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 1234 1047 0 0 0 chr13 85168302 85168416 -35115896 - L1Md_T LINE L1 -144 6438 6325 1 1234 492 179 0 0 chr13 85168417 85168529 -35115783 + (TA)n Simple_repeat Simple_repeat 2 113 0 1 1234 21 57 0 0 chr13 85168785 85168820 -35115492 + AT_rich Low_complexity Low_complexity 1 35 0 1 1234 1697 215 11 26 chr13 85168851 85169233 -35115079 - ORR1C1 LTR MaLR -2 376 1 1 1234 1072 255 20 13 chr13 85169443 85169749 -35114563 + Lx7 LINE L1 872 1179 -6549 1 1234 1361 253 82 34 chr13 85169812 85170229 -35114083 - RLTR17 LTR ERVK -148 544 108 1 1234 6134 226 67 36 chr13 85170250 85170992 -35113320 + Lx7 LINE L1 1261 2016 -3864 1 1234 2830 58 0 0 chr13 85170992 85171338 -35112974 + ORR1A1 LTR MaLR 1 346 0 1 1234 6134 226 67 36 chr13 85171338 85172461 -35111851 + Lx7 LINE L1 2017 3125 -2755 1 1234 234 0 0 0 chr13 85172461 85172487 -35111825 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1 1234 6134 226 67 36 chr13 85172487 85172620 -35111692 + Lx7 LINE L1 3126 3320 -2560 1 1234 3975 193 57 44 chr13 85172670 85173600 -35110712 - RMER17B LTR ERVK -15 943 2 1 1234 4604 226 97 98 chr13 85173601 85174314 -35109998 + Lx7 LINE L1 3333 4109 -1771 1 1234 332 200 13 88 chr13 85174314 85174473 -35109839 + RMER17D LTR ERVK 352 498 -391 1 1234 4604 226 97 98 chr13 85174473 85175462 -35108850 + Lx7 LINE L1 4110 5190 -690 1 1234 228 307 21 108 chr13 85175466 85175498 -35108814 + YREP_Mm Unknown Unknown 157 252 -1560 1 1234 1002 69 0 8 chr13 85175498 85175630 -35108682 - B1_Mm SINE Alu -8 139 9 1 1234 228 307 21 108 chr13 85175630 85175652 -35108660 + YREP_Mm Unknown Unknown 253 326 -1486 1 1234 534 225 154 84 chr13 85175653 85175997 -35108315 + RLTR9A LTR ERVK 1 368 0 2 1234 22 0 0 0 chr13 85176539 85176561 -35107751 + AT_rich Low_complexity Low_complexity 1 22 0 2 1234 626 225 188 52 chr13 85176569 85176893 -35107419 + RLTR9A LTR ERVK 1 368 0 2 1234 471 238 7 37 chr13 85177123 85177258 -35107054 + Lx3B LINE L1 668 798 -6186 2 1234 232 158 224 17 chr13 85177258 85177316 -35106996 + RLTR16 LTR ERVK 1 70 -435 2 1234 3092 152 7 164 chr13 85177316 85178150 -35106162 + MusHAL1 LINE L1 958 1660 -1052 2 1234 499 198 215 49 chr13 85178152 85178417 -35105895 - RLTR6_Mm LTR ERV1 -70 584 276 2 1234 822 130 12 99 chr13 85178430 85178601 -35105711 - RLTR6_Mm LTR ERV1 -498 156 1 2 1234 3177 120 14 9 chr13 85178601 85179154 -35105158 + Lx3B LINE L1 2870 3425 -2461 2 1234 35377 42 1 4 chr13 85179155 85184398 -35099914 + L1Md_T LINE L1 268 5589 -297 2 1234 8419 35 0 0 chr13 85184398 85185423 -35098889 + L1Md_T LINE L1 5590 6585 0 2 1234 13698 132 55 10 chr13 85185426 85188844 -35095468 + Lx3B LINE L1 3411 6972 -1 2 1234 22 35 0 0 chr13 85188845 85188874 -35095438 + AT_rich Low_complexity Low_complexity 1 29 0 2 1234 1020 227 141 0 chr13 85188876 85189175 -35095137 + Lx7 LINE L1 5262 5602 -278 1 1234 621 216 0 50 chr13 85189184 85189325 -35094987 - B1_Mur3 SINE Alu 0 149 16 2 1234 349 255 223 22 chr13 85189377 85189592 -35094720 - Lx9 LINE L1 -9 7635 7375 2 1234 2118 163 53 13 chr13 85189592 85189971 -35094341 + ORR1B1 LTR MaLR 1 394 0 2 1234 341 298 537 11 chr13 85189971 85190096 -35094216 - Lx9 LINE L1 -270 7374 7186 2 1234 468 306 71 24 chr13 85190101 85190355 -35093957 + Lx7 LINE L1 5898 6163 -1533 1 1234 459 0 0 0 chr13 85193184 85193235 -35091077 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1234 1050 234 0 0 chr13 85193324 85193542 -35090770 - Lx5 LINE L1 -1028 6022 5805 2 1234 5918 126 26 22 chr13 85194103 85194757 -35089555 + L1VL4 LINE L1 29 688 -5614 2 1234 687 118 311 0 chr13 85194757 85194892 -35089420 + B2_Mm1t SINE B2 3 179 -14 2 1234 594 0 0 0 chr13 85194893 85194959 -35089353 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 2 154 17126 97 26 6 chr13 85194959 85197051 -35087261 + L1VL4 LINE L1 689 2805 -754 2 1235 294 53 35 17 chr13 85197051 85197109 -35087203 + (CAAA)n Simple_repeat Simple_repeat 2 60 0 2 1235 17126 94 26 5 chr13 85197109 85197827 -35086485 + L1VL4 LINE L1 2806 3555 -4 2 1235 28 71 0 0 chr13 85198060 85198116 -35086196 + AT_rich Low_complexity Low_complexity 1 56 0 2 1235 213 39 0 0 chr13 85198941 85198967 -35085345 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2 1235 305 82 0 0 chr13 85199031 85199080 -35085232 - L1Md_F2 LINE L1 -10 6572 6524 2 1235 34324 81 8 8 chr13 85199080 85205067 -35079245 - L1Md_F2 LINE L1 -195 6387 406 2 1235 644 119 0 19 chr13 85205259 85205362 -35078950 + B2_Mm2 SINE B2 1 101 -94 2 1235 22 35 0 0 chr13 85205651 85205680 -35078632 + AT_rich Low_complexity Low_complexity 1 29 0 2 1235 23 0 0 0 chr13 85206032 85206055 -35078257 + AT_rich Low_complexity Low_complexity 1 23 0 2 1235 378 70 42 0 chr13 85206196 85206267 -35078045 + (CA)n Simple_repeat Simple_repeat 2 75 0 2 1235 33 0 0 0 chr13 85207100 85207133 -35077179 + AT_rich Low_complexity Low_complexity 1 33 0 2 1235 26 0 0 0 chr13 85207817 85207843 -35076469 + AT_rich Low_complexity Low_complexity 1 26 0 2 1235 243 245 0 0 chr13 85209511 85209560 -35074752 - L2a LINE L2 -1 3425 3377 2 1235 21 36 0 0 chr13 85210488 85210516 -35073796 + AT_rich Low_complexity Low_complexity 1 28 0 2 1235 217 174 22 0 chr13 85212995 85213041 -35071271 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 2 1235 228 321 0 0 chr13 85213277 85213333 -35070979 + ID4 SINE ID 2 57 -26 2 1235 336 342 80 31 chr13 85213398 85213624 -35070688 + HAL1 LINE L1 1535 1771 -736 2 1235 252 238 0 0 chr13 85213836 85213899 -35070413 + GA-rich Low_complexity Low_complexity 2 64 0 2 1235 1405 262 12 85 chr13 85214232 85214581 -35069731 - MTD LTR MaLR -30 389 61 2 1235 2981 49 0 0 chr13 85214581 85214949 -35069363 - L1Md_T LINE L1 0 6582 6215 2 1235 1405 262 12 85 chr13 85214949 85215000 -35069312 - MTD LTR MaLR -359 60 18 2 1235 29225 113 56 38 chr13 85215595 85217469 -35066843 + Lx3_Mus LINE L1 238 2527 -3359 2 1235 3289 51 2 0 chr13 85217469 85217864 -35066448 + MTA_Mm LTR MaLR 1 396 0 2 1235 29225 99 19 42 chr13 85217864 85222458 -35061854 + Lx3_Mus LINE L1 2528 6942 -67 2 1235 29 47 0 0 chr13 85222470 85222513 -35061799 + AT_rich Low_complexity Low_complexity 1 43 0 2 1235 219 103 0 0 chr13 85222874 85222913 -35061399 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1235 216 0 0 0 chr13 85223434 85223458 -35060854 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1235 26 50 0 0 chr13 85223673 85223713 -35060599 + AT_rich Low_complexity Low_complexity 1 40 0 2 1235 6800 155 58 21 chr13 85223723 85225055 -35059257 - Lx2B LINE L1 -4 6996 5616 2 1235 603 135 0 0 chr13 85225056 85225145 -35059167 + B2_Mm2 SINE B2 1 89 -106 2 1235 185 65 0 31 chr13 85225765 85225797 -35058515 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1235 21 0 0 0 chr13 85225862 85225883 -35058429 + AT_rich Low_complexity Low_complexity 1 21 0 2 1235 24 67 0 0 chr13 85226330 85226375 -35057937 + AT_rich Low_complexity Low_complexity 1 45 0 2 1235 4702 118 13 49 chr13 85226956 85227748 -35056564 + Lx2B LINE L1 6238 7000 0 2 1235 1491 261 52 19 chr13 85227797 85228164 -35056148 - MTE2a LTR MaLR 0 379 1 2 1235 489 301 117 28 chr13 85228938 85229259 -35055053 + MER90a LTR ERV1 1 515 -60 2 1235 358 218 129 0 chr13 85229350 85229474 -35054838 - Lx9 LINE L1 -3 7641 7502 2 1235 2574 269 9 24 chr13 85229742 85230406 -35053906 - Lx6 LINE L1 -6 7454 6801 2 1235 295 331 183 63 chr13 85230486 85230979 -35053333 + RMER13A LTR ERVK 95 646 -214 2 1235 3603 245 73 39 chr13 85231142 85231444 -35052868 - Lx6 LINE L1 -658 6802 6513 2 1235 299 61 0 39 chr13 85231444 85231495 -35052817 + (TTG)n Simple_repeat Simple_repeat 2 50 0 2 1235 3603 217 52 21 chr13 85231495 85232745 -35051567 - Lx6 LINE L1 -948 6512 5191 2 1235 315 0 0 0 chr13 85232745 85232780 -35051532 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1235 1993 159 138 24 chr13 85232794 85233207 -35051105 + RMER6B LTR ERVK 2 461 0 2 1235 233 162 0 0 chr13 85233214 85233251 -35051061 - Lx6 LINE L1 -705 5175 5139 2 1235 265 327 65 45 chr13 85233293 85233575 -35050737 + RLTR12B LTR ERVK 207 504 -24 2 1235 4194 27 2 4 chr13 85234183 85234666 -35049646 + LTRIS_Mm LTR ERV1 1 482 0 2 1235 282 277 48 29 chr13 85235111 85235215 -35049097 + RLTR15 LTR ERVK 246 351 -8 2 1235 1472 248 97 27 chr13 85236149 85236754 -35047558 + MYSERV6-int LTR ERVK 3989 4614 -4345 2 1235 1249 198 57 0 chr13 85236815 85237078 -35047234 + MYSERV6-int LTR ERVK 8344 8621 -338 2 1235 1426 134 0 0 chr13 85237078 85237302 -35047010 - L1_Mur1 LINE L1 -218 5668 5445 2 1235 248 263 62 78 chr13 85237374 85237502 -35046810 - RLTR41 LTR ERV1 -70 376 251 2 1235 4662 92 26 4 chr13 85237984 85238666 -35045646 - L1_Mur1 LINE L1 -462 5424 4740 2 1235 773 56 0 9 chr13 85238666 85238774 -35045538 + (TTA)n Simple_repeat Simple_repeat 2 108 0 2 1235 4662 92 26 4 chr13 85238774 85238812 -35045500 - L1_Mur1 LINE L1 -1147 4739 4689 2 1235 875 62 0 0 chr13 85238812 85238925 -35045387 + B1_Mus1 SINE Alu 31 143 -5 2 1235 213 121 0 0 chr13 85238928 85238961 -35045351 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 2 1235 3086 111 4 67 chr13 85239252 85239804 -35044508 - Lx3_Mus LINE L1 -865 6144 5628 2 1235 7229 78 2 41 chr13 85239822 85240960 -35043352 + L1_Mur1 LINE L1 4498 5590 -296 2 1235 233 358 12 0 chr13 85241509 85241585 -35042727 + LTR89 LTR ERVL? 490 566 -313 2 1235 238 276 164 39 chr13 85241585 85241713 -35042599 + MLT1A1 LTR MaLR 1 144 -264 2 1235 969 319 23 57 chr13 85242048 85242433 -35041879 + MER44B DNA MER2_type 4 375 -175 2 1235 1153 154 44 44 chr13 85242719 85242794 -35041518 - L1_Mur3 LINE L1 -1758 4122 4053 2 1235 2692 57 60 0 chr13 85242794 85243130 -35041182 + RLTR10D LTR ERVK 4 359 0 2 1235 1153 154 44 44 chr13 85243130 85243325 -35040987 - L1_Mur3 LINE L1 -1828 4052 3852 2 1235 366 23 0 0 chr13 85243477 85243520 -35040792 + (GA)n Simple_repeat Simple_repeat 2 44 0 2 1235 14667 188 53 26 chr13 85243547 85244556 -35039756 + Lx6 LINE L1 2066 3062 -2818 2 1235 1329 73 0 0 chr13 85244556 85244734 -35039578 + (GAA)n Simple_repeat Simple_repeat 3 180 0 2 1235 14667 188 53 26 chr13 85244734 85246831 -35037481 + Lx6 LINE L1 3063 5269 -611 2 1235 5347 103 22 38 chr13 85246831 85247665 -35036647 + Lx LINE L1 5828 6647 -7 2 1235 14667 221 82 16 chr13 85247665 85249065 -35035247 + Lx6 LINE L1 5270 6762 -698 2 1235 558 0 0 0 chr13 85249065 85249127 -35035185 + (CAAAA)n Simple_repeat Simple_repeat 2 63 0 2 1235 4609 246 103 7 chr13 85249127 85249436 -35034876 + Lx6 LINE L1 6763 7110 -350 2 1235 315 0 0 0 chr13 85249436 85249471 -35034841 + (TA)n Simple_repeat Simple_repeat 1 35 0 2 1235 3557 74 2 2 chr13 85249889 85250361 -35033951 + Lx3_Mus LINE L1 6536 7007 -2 2 1235 1054 242 148 0 chr13 85250361 85250658 -35033654 + Lx6 LINE L1 7105 7445 -15 2 1235 2408 216 44 12 chr13 85251643 85252216 -35032096 - Lx9 LINE L1 -328 7316 6726 2 1235 3909 113 12 28 chr13 85252217 85252855 -35031457 - RLTR5_Mm LTR ERV1 0 628 1 2 1235 359 145 16 0 chr13 85252865 85252927 -35031385 - Lx9 LINE L1 -927 6717 6655 2 1235 465 19 0 0 chr13 85252982 85253036 -35031276 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2 1235 547 127 272 10 chr13 85253183 85253286 -35031026 + B1_Mus1 SINE Alu 1 130 -18 2 1235 5383 214 43 15 chr13 85253316 85254762 -35029550 - Lx6 LINE L1 -605 6855 5376 2 1235 2987 91 2 0 chr13 85254762 85255160 -35029152 + MTB LTR MaLR 1 399 -1 2 1235 3867 187 60 15 chr13 85255160 85255581 -35028731 - Lx6 LINE L1 -505 5375 4923 2 1235 2400 172 10 0 chr13 85255581 85255971 -35028341 - ORR1B1 LTR MaLR 0 394 1 2 1235 2234 189 60 19 chr13 85255971 85256234 -35028078 - ORR1B1-int LTR MaLR 0 1509 1250 2 1235 329 0 0 24 chr13 85256234 85256276 -35028036 + (TAA)n Simple_repeat Simple_repeat 2 42 0 2 1235 2234 189 60 19 chr13 85256276 85256491 -35027821 - ORR1B1-int LTR MaLR -260 1249 1013 2 1235 425 253 44 136 chr13 85256494 85256635 -35027677 + RMER13B LTR ERVK 22 143 -765 2 1235 2228 106 148 3 chr13 85256635 85256994 -35027318 - LTRIS3 LTR ERV1 0 512 102 2 1235 357 24 0 0 chr13 85257046 85257088 -35027224 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1235 384 22 0 0 chr13 85257100 85257145 -35027167 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1235 3497 178 32 12 chr13 85257151 85257829 -35026483 - RLTR17 LTR ERVK 0 692 1 2 1235 3474 186 55 6 chr13 85257833 85258684 -35025628 - Lx6 LINE L1 -3826 2054 1153 2 1235 269 175 16 0 chr13 85258715 85258778 -35025534 - Lx2B LINE L1 -4 6996 6933 2 1235 1093 215 119 3 chr13 85258757 85259059 -35025253 - Lx2B LINE L1 -64 6994 6557 2 1235 4228 172 26 60 chr13 85259057 85260010 -35024302 + L1_Mur2 LINE L1 4880 5800 -77 2 1235 642 222 60 37 chr13 85260016 85260084 -35024228 - Lx6 LINE L1 -6549 1179 1100 2 1235 219 36 0 0 chr13 85260084 85260112 -35024200 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1235 642 222 60 37 chr13 85260112 85260258 -35024054 - Lx6 LINE L1 -6629 1099 961 2 1235 473 286 59 63 chr13 85260258 85260497 -35023815 - RMER2 LTR ERV1 -1 566 329 2 1235 2014 287 41 38 chr13 85260764 85260910 -35023402 - Lx6 LINE L1 -6764 964 817 2 1235 212 0 0 35 chr13 85260910 85260939 -35023373 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2 1235 2014 287 41 38 chr13 85260939 85260993 -35023319 - Lx6 LINE L1 -6912 816 765 2 1235 1179 68 0 0 chr13 85260993 85261140 -35023172 + B1_Mm SINE Alu 1 147 0 2 1235 2014 302 53 26 chr13 85261140 85262058 -35022254 - Lx6 LINE L1 -6964 764 52 2 1235 29 0 0 0 chr13 85262097 85262126 -35022186 + AT_rich Low_complexity Low_complexity 1 29 0 2 1235 329 204 127 86 chr13 85264034 85264254 -35020058 + Lx9 LINE L1 7416 7644 0 2 1235 183 42 0 0 chr13 85264797 85264821 -35019491 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1235 1121 219 154 88 chr13 85264842 85265342 -35018970 + MT2A LTR ERVL 1 533 0 3 1235 692 183 9 9 chr13 85265430 85265546 -35018766 + B1_Mur3 SINE Alu 15 130 -19 3 1235 2739 116 10 2 chr13 85265546 85265954 -35018358 - RLTR19B LTR ERVK -289 426 16 3 1235 739 97 0 88 chr13 85267131 85267256 -35017056 - B1_Mus2 SINE Alu -3 144 31 3 1235 1968 163 26 59 chr13 85267274 85267665 -35016647 + ORR1C1 LTR MaLR 1 378 0 3 1235 466 272 23 23 chr13 85269234 85269362 -35014950 + B1F SINE Alu 18 145 -4 3 1235 26 0 0 0 chr13 85269424 85269450 -35014862 + AT_rich Low_complexity Low_complexity 1 26 0 3 1235 588 121 0 0 chr13 85269495 85269586 -35014726 + (T)n Simple_repeat Simple_repeat 1 91 0 3 1235 7345 154 62 13 chr13 85269655 85272009 -35012303 - Lx LINE L1 0 6654 4160 3 1235 4567 180 39 30 chr13 85272015 85273408 -35010904 - Lx LINE L1 -3600 2277 882 3 1235 2685 215 43 20 chr13 85273897 85274504 -35009808 + RMER20B LTR ERVK 7 627 0 3 1235 21 36 0 0 chr13 85274684 85274712 -35009600 + AT_rich Low_complexity Low_complexity 1 28 0 3 1235 373 266 95 66 chr13 85274923 85275060 -35009252 + RSINE1 SINE B4 3 143 -22 3 1235 24 0 0 0 chr13 85275274 85275298 -35009014 + AT_rich Low_complexity Low_complexity 1 24 0 3 1235 353 360 0 13 chr13 85275374 85275523 -35008789 - B1F SINE Alu 0 149 3 3 1235 643 315 75 21 chr13 85275858 85276244 -35008068 + Lx9 LINE L1 7089 7495 -149 3 1235 1844 129 135 19 chr13 85276280 85276644 -35007668 + RLTR9E LTR ERVK 4 409 0 3 1235 4396 155 103 40 chr13 85276672 85277169 -35007143 + L1VL2 LINE L1 66 654 -5681 3 1235 1139 77 0 0 chr13 85277169 85277312 -35007000 + B1_Mus2 SINE Alu 5 147 0 3 1235 4396 113 46 16 chr13 85277312 85278078 -35006234 + L1VL2 LINE L1 655 1392 -2223 3 1235 441 139 0 0 chr13 85278079 85278158 -35006154 + Lx LINE L1 6562 6640 -14 3 1235 774 161 7 9 chr13 85278166 85278337 -35005975 + L1_Mur2 LINE L1 3849 4021 -1862 3 1235 332 320 84 51 chr13 85278835 85279013 -35005299 - ORR1E LTR MaLR -154 205 22 3 1235 3248 42 25 0 chr13 85279018 85279419 -35004893 - RLTR10A LTR ERVK 0 411 1 3 1235 709 279 29 10 chr13 85279625 85279831 -35004481 - B3 SINE B2 -6 210 1 3 1235 441 0 0 0 chr13 85279937 85279986 -35004326 + (TAA)n Simple_repeat Simple_repeat 1 49 0 3 1235 2082 166 137 32 chr13 85280709 85281207 -35003105 + Lx2 LINE L1 6448 6997 0 3 1235 213 94 0 0 chr13 85281453 85281485 -35002827 + (GGAGA)n Simple_repeat Simple_repeat 3 34 0 3 1235 322 301 81 40 chr13 85281485 85281634 -35002678 + HAL1-3A_ME LINE L1 2284 2438 -420 3 1235 198 64 0 96 chr13 85281634 85281686 -35002626 + G-rich Low_complexity Low_complexity 4 50 0 3 1235 1113 113 0 0 chr13 85281687 85281855 -35002457 + (GGAGA)n Simple_repeat Simple_repeat 3 170 0 3 1235 559 284 57 0 chr13 85282306 85282447 -35001865 + RSINE1 SINE B4 3 151 -14 3 1235 1188 42 7 0 chr13 85282521 85282665 -35001647 + B1_Mus2 SINE Alu 1 145 -2 3 1235 355 128 0 107 chr13 85282685 85282825 -35001487 + A-rich Low_complexity Low_complexity 1 125 0 3 1235 1859 216 44 86 chr13 85282830 85283654 -35000658 + L1Md_A LINE L1 417 1205 -5519 3 1235 6518 66 20 0 chr13 85283661 85284553 -34999759 + L1Md_F3 LINE L1 4677 5586 -297 3 1235 7996 41 10 0 chr13 85284553 85285527 -34998785 + L1Md_F3 LINE L1 5587 6570 -14 3 1235 1491 211 60 6 chr13 85285602 85285917 -34998395 - MTC LTR MaLR -1 420 89 3 1235 587 318 8 16 chr13 85285954 85286200 -34998112 - Lx5 LINE L1 -81 7379 7136 3 1235 595 269 209 22 chr13 85286204 85286481 -34997831 + RLTR9A LTR ERVK 1 329 -39 3 1235 744 240 39 54 chr13 85286515 85286767 -34997545 - Lx5 LINE L1 -566 6894 6506 3 1235 7321 195 75 37 chr13 85286761 85288648 -34995664 + Lx7 LINE L1 4896 6906 -790 3 1235 263 26 51 0 chr13 85288648 85288687 -34995625 + (CAGAGA)n Simple_repeat Simple_repeat 6 46 0 3 1235 7321 212 58 51 chr13 85288687 85288848 -34995464 + Lx7 LINE L1 6907 7067 -629 3 1235 4408 125 13 115 chr13 85288848 85289022 -34995290 - RLTR13B4 LTR ERVK 0 803 669 3 1235 1127 76 14 0 chr13 85289022 85289167 -34995145 - B1_Mus1 SINE Alu 0 148 2 3 1235 4408 125 13 115 chr13 85289167 85289886 -34994426 - RLTR13B4 LTR ERVK -135 668 1 3 1235 7321 212 58 51 chr13 85289886 85290455 -34993857 + Lx7 LINE L1 7068 7597 -99 3 1235 24 0 0 0 chr13 85290968 85290992 -34993320 + AT_rich Low_complexity Low_complexity 1 24 0 3 1235 1435 263 22 74 chr13 85292569 85292975 -34991337 + MTD LTR MaLR 35 419 0 3 1235 1492 235 5 40 chr13 85293515 85293941 -34990371 + Lx7 LINE L1 5596 6006 -1690 3 1235 380 289 126 99 chr13 85293988 85294529 -34989783 - RMER13B LTR ERVK -99 761 234 3 1235 339 277 48 34 chr13 85294728 85294874 -34989438 + Lx7 LINE L1 6035 6182 -1514 3 1235 2143 224 91 33 chr13 85294871 85295348 -34988964 + Lx6 LINE L1 6275 6740 -720 3 1235 378 0 0 0 chr13 85295348 85295390 -34988922 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1235 2143 224 91 33 chr13 85295390 85295462 -34988850 + Lx6 LINE L1 6741 6855 -605 3 1235 1189 61 0 0 chr13 85295487 85295634 -34988678 + B1_Mm SINE Alu 1 147 0 3 1235 257 102 39 39 chr13 85295635 85295737 -34988575 + A-rich Low_complexity Low_complexity 3 104 0 3 1235 362 134 0 82 chr13 85295743 85295816 -34988496 + Lx7 LINE L1 6839 6905 -791 3 1235 282 211 0 53 chr13 85295816 85295891 -34988421 + GA-rich Low_complexity Low_complexity 3 73 0 3 1235 1806 249 75 0 chr13 85295891 85296328 -34987984 + Lx6 LINE L1 6883 7352 -108 3 1235 1494 165 7 54 chr13 85296328 85296604 -34987708 - RLTR20B3 LTR ERVK 0 577 315 3 1235 2791 208 55 27 chr13 85296607 85297263 -34987049 + Lx7 LINE L1 6724 7397 -299 3 1235 240 226 0 0 chr13 85297263 85297316 -34986996 + A-rich Low_complexity Low_complexity 1 53 0 3 1235 497 323 12 42 chr13 85297691 85297856 -34986456 - RSINE1 SINE B4 -3 162 3 3 1235 259 246 0 42 chr13 85299446 85299500 -34984812 - MT2B LTR ERVL -525 76 24 3 1235 218 0 0 86 chr13 85299500 85299535 -34984777 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 3 1235 259 246 0 42 chr13 85299535 85299552 -34984760 - MT2B LTR ERVL -578 23 9 3 1235 963 317 37 83 chr13 85299570 85300134 -34984178 + Lx9 LINE L1 6495 7032 -612 3 1235 192 77 0 0 chr13 85300177 85300203 -34984109 + (TATG)n Simple_repeat Simple_repeat 3 28 0 3 1235 435 296 53 6 chr13 85300221 85300391 -34983921 - Lx9 LINE L1 -174 7470 7293 3 1235 558 313 10 5 chr13 85300455 85300654 -34983658 + Lx8 LINE L1 6959 7158 -315 3 1235 324 120 0 0 chr13 85300738 85300788 -34983524 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1235 533 307 6 84 chr13 85300870 85301048 -34983264 + FordPrefect DNA Tip100 1333 1496 -187 3 1235 552 274 109 36 chr13 85301119 85301339 -34982973 + LTR40b LTR ERVL 195 430 -32 3 1235 267 103 0 0 chr13 85301453 85301492 -34982820 + (GGA)n Simple_repeat Simple_repeat 1 39 0 3 1235 248 53 26 0 chr13 85301685 85301723 -34982589 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 3 1235 1039 60 8 0 chr13 85301727 85301861 -34982451 - B1_Mus1 SINE Alu -12 136 2 3 1235 180 0 0 0 chr13 85301897 85301917 -34982395 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 1235 490 296 0 0 chr13 85302038 85302153 -34982159 + ID_B1 SINE B4 110 224 0 3 1235 1591 221 19 32 chr13 85302341 85302720 -34981592 - ORR1D1 LTR MaLR 0 374 1 3 1235 1944 178 148 31 chr13 85302760 85303185 -34981127 + MT2A LTR ERVL 59 533 0 3 1235 338 277 128 16 chr13 85303216 85303403 -34980909 - ORSL DNA Tip100 -2 273 66 3 1235 299 331 74 67 chr13 85304232 85304381 -34979931 - MER5B DNA MER1_type -27 151 2 3 1235 333 0 0 0 chr13 85304754 85304791 -34979521 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1235 409 305 78 7 chr13 85305606 85305748 -34978564 + MER5A1 DNA MER1_type 12 163 -3 3 1235 294 238 0 16 chr13 85305779 85305843 -34978469 - MER58B DNA MER1_type -19 322 260 3 1235 274 328 94 47 chr13 85305973 85306101 -34978211 + MLT2B1 LTR ERVL 369 502 -65 3 1235 1452 256 56 75 chr13 85306245 85306672 -34977640 + MTD LTR MaLR 1 419 0 3 1235 201 121 0 0 chr13 85306757 85306790 -34977522 + (TC)n Simple_repeat Simple_repeat 1 33 0 3 1235 569 298 65 20 chr13 85306843 85307042 -34977270 - Lx5 LINE L1 -225 6825 6618 3 1235 522 313 52 5 chr13 85307084 85307296 -34977016 + ERVL-int LTR ERVL 445 666 -5048 3 1235 678 270 22 31 chr13 85307383 85307612 -34976700 + ERVL-int LTR ERVL 803 1029 -4685 3 1235 403 340 10 20 chr13 85307738 85307942 -34976370 + ERVL-int LTR ERVL 4484 4685 -1029 3 1235 6132 89 26 7 chr13 85308024 85308892 -34975420 - Lx LINE L1 -4 6650 5766 3 1235 6574 145 27 19 chr13 85308892 85309077 -34975235 - L1_Mm LINE L1 -328 5555 5371 3 1235 2170 211 114 67 chr13 85309077 85309894 -34974418 + RLTR13A LTR ERVK 1 855 0 3 1235 6574 145 27 19 chr13 85309894 85310654 -34973658 - L1_Mm LINE L1 -513 5370 4631 3 1235 333 0 0 0 chr13 85310654 85310691 -34973621 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 3 1235 6574 145 27 19 chr13 85310691 85310972 -34973340 - L1_Mm LINE L1 -1253 4630 4319 3 1235 1376 279 76 41 chr13 85310973 85311555 -34972757 + ERVL-int LTR ERVL 4832 5433 -324 3 1235 500 304 66 36 chr13 85311589 85311893 -34972419 + ERVL-int LTR ERVL 5418 5730 -27 3 1235 505 358 53 93 chr13 85311953 85312255 -34972057 + B4A SINE B4 3 292 0 3 1235 748 254 25 12 chr13 85312426 85312623 -34971689 + B3 SINE B2 5 197 -1 3 1235 453 363 91 19 chr13 85312677 85312885 -34971427 + ID_B1 SINE B4 2 224 0 3 1235 391 243 202 26 chr13 85312915 85313029 -34971283 + B1F SINE Alu 10 143 -6 3 1235 518 266 28 0 chr13 85313040 85313183 -34971129 + B1_Mm SINE Alu 1 147 0 3 1235 1761 64 16 0 chr13 85313451 85313701 -34970611 + Lx LINE L1 5624 5877 -777 3 1235 13561 93 14 12 chr13 85313702 85316590 -34967722 + L1VL2 LINE L1 90 2987 -628 3 1235 218 0 94 0 chr13 85316952 85316984 -34967328 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 3 1235 1009 92 28 0 chr13 85316990 85317132 -34967180 - B1_Mus2 SINE Alu 0 147 2 3 1235 23 0 0 0 chr13 85317362 85317385 -34966927 + AT_rich Low_complexity Low_complexity 1 23 0 3 1235 1549 81 9 0 chr13 85317416 85317661 -34966651 + Lx LINE L1 5847 6093 -561 3 1235 556 216 17 0 chr13 85317661 85317777 -34966535 - RLTR24 LTR ERV1 -79 450 333 3 1235 262 317 36 12 chr13 85317770 85317853 -34966459 - RMER20B LTR ERVK -16 611 527 3 1235 37285 36 0 1 chr13 85317987 85320369 -34963943 - L1Md_T LINE L1 -8 6574 4197 3 1235 4307 12 0 16 chr13 85320369 85320859 -34963453 + LTRIS_Mm LTR ERV1 1 482 0 3 1235 37285 48 20 6 chr13 85320859 85324628 -34959684 - L1Md_T LINE L1 -1687 4196 133 3 1235 1420 190 182 41 chr13 85324630 85325019 -34959293 - RMER20B LTR ERVK -169 458 15 3 1235 572 202 23 39 chr13 85325015 85325144 -34959168 - RLTR24 LTR ERV1 -173 356 230 3 1235 308 257 94 21 chr13 85325357 85325464 -34958848 - PB1 SINE Alu -4 123 5 4 1235 2382 61 3 10 chr13 85325594 85325907 -34958405 + L1_Mus1 LINE L1 6257 6567 0 4 1235 796 85 93 0 chr13 85326206 85326324 -34957988 - MT2B2 LTR ERVL -246 338 210 4 1235 420 343 74 46 chr13 85326474 85326758 -34957554 + B4A SINE B4 1 292 0 4 1235 454 218 90 21 chr13 85327010 85327115 -34957197 - Lx LINE L1 -20 6634 6533 4 1235 198 0 0 0 chr13 85327115 85327137 -34957175 + (CCCA)n Simple_repeat Simple_repeat 4 25 0 4 1235 454 218 90 21 chr13 85327137 85327176 -34957136 - Lx LINE L1 -122 6532 6481 4 154 4129 144 27 8 chr13 85327175 85327890 -34956422 + Lx LINE L1 5706 6433 -221 4 1236 359 295 53 0 chr13 85328265 85328360 -34955952 + PB1D10 SINE Alu 5 104 -45 4 1236 284 169 16 33 chr13 85328398 85328459 -34955853 + U1 snRNA snRNA 102 161 -4 4 1236 195 42 0 0 chr13 85328621 85328645 -34955667 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1236 584 185 220 6 chr13 85328645 85328804 -34955508 + B3 SINE B2 24 216 0 4 1236 2969 188 58 17 chr13 85330562 85331201 -34953111 - Lx5 LINE L1 -3 7047 6383 4 1236 2877 131 4 31 chr13 85331203 85331471 -34952841 - L1_Mur2 LINE L1 -173 5704 5448 4 1236 180 0 0 0 chr13 85331471 85331491 -34952821 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 4 1236 1137 81 0 13 chr13 85331492 85331642 -34952670 - B1_Mus1 SINE Alu 0 148 1 4 1236 2877 131 4 31 chr13 85331642 85331883 -34952429 - L1_Mur2 LINE L1 -430 5447 5207 4 1236 2231 160 130 2 chr13 85331882 85332365 -34951947 + L1_Mur2 LINE L1 4649 5193 -684 4 1236 503 173 21 35 chr13 85333028 85333172 -34951140 - RMER17B LTR ERVK -501 457 316 4 1236 255 292 146 0 chr13 85333384 85333514 -34950798 - B1F SINE Alu 0 149 1 4 1236 597 301 68 0 chr13 85333514 85333591 -34950721 - ID_B1 SINE B4 -132 92 4 4 1236 2835 43 67 0 chr13 85333778 85334153 -34950159 + MTB LTR MaLR 1 400 0 4 1236 537 58 0 0 chr13 85335031 85335100 -34949212 + (TA)n Simple_repeat Simple_repeat 1 69 0 4 1236 1886 226 39 9 chr13 85335112 85335572 -34948740 + RLTR16 LTR ERVK 6 479 -26 4 1236 24 32 0 0 chr13 85335820 85335851 -34948461 + AT_rich Low_complexity Low_complexity 1 31 0 4 1236 207 0 0 0 chr13 85335941 85335964 -34948348 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 4 1236 202 289 143 12 chr13 85336173 85336257 -34948055 + L2 LINE L2 2514 2608 -811 4 1236 195 42 0 0 chr13 85336826 85336850 -34947462 + (T)n Simple_repeat Simple_repeat 1 24 0 4 1236 293 298 61 50 chr13 85337296 85337395 -34946917 - MER5A DNA MER1_type -1 188 89 4 1236 377 293 10 10 chr13 85337606 85337706 -34946606 + PB1 SINE Alu 22 121 -6 4 1236 814 269 84 75 chr13 85338358 85338704 -34945608 - MT2B LTR ERVL 0 601 253 4 1236 517 227 35 36 chr13 85338717 85338861 -34945451 - MT2B LTR ERVL -451 133 1 4 1236 937 251 14 23 chr13 85339233 85339449 -34944863 + B3 SINE B2 3 216 0 4 1236 368 275 107 48 chr13 85340645 85340832 -34943480 + B3A SINE B2 1 198 0 4 1236 312 200 0 0 chr13 85340832 85340912 -34943400 + (TA)n Simple_repeat Simple_repeat 1 80 0 4 1236 888 71 150 0 chr13 85341205 85341332 -34942980 + B1_Mus2 SINE Alu 2 147 0 4 1236 5874 170 103 21 chr13 85343055 85344270 -34940042 - RMER12 LTR ERVK 0 1322 8 4 1236 431 236 124 0 chr13 85344284 85344373 -34939939 - B3A SINE B2 -98 100 1 4 1236 408 229 83 0 chr13 85344583 85344679 -34939633 + ID_B1 SINE B4 121 224 0 4 1236 206 188 0 59 chr13 85344692 85344706 -34939606 + A-rich Low_complexity Low_complexity 1 13 0 4 1236 1181 47 0 13 chr13 85344706 85344856 -34939456 + B1_Mus1 SINE Alu 1 148 0 4 1236 206 188 0 59 chr13 85344856 85344892 -34939420 + A-rich Low_complexity Low_complexity 14 48 0 4 1236 576 186 0 0 chr13 85345063 85345176 -34939136 + (TA)n Simple_repeat Simple_repeat 2 114 0 4 1236 424 305 58 7 chr13 85346600 85346755 -34937557 + MLT1D LTR MaLR 343 505 0 4 1236 266 366 8 59 chr13 85346819 85346938 -34937374 + RMER12 LTR ERVK 742 854 -468 4 1236 296 380 26 0 chr13 85346955 85347068 -34937244 - PB1D10 SINE Alu -1 116 1 4 1236 606 243 36 0 chr13 85348205 85348345 -34935967 - B1_Mus2 SINE Alu -2 145 1 4 1236 235 246 54 14 chr13 85348621 85348695 -34935617 - ID4 SINE ID -3 80 4 4 1236 24 0 0 0 chr13 85349183 85349207 -34935105 + AT_rich Low_complexity Low_complexity 1 24 0 4 1236 406 272 78 35 chr13 85349501 85349642 -34934670 + MER58A DNA MER1_type 52 198 -26 4 1236 266 273 155 8 chr13 85349862 85349991 -34934321 - MER5C DNA MER1_type -128 185 38 4 1236 231 252 147 28 chr13 85350227 85350370 -34933942 - L1M5 LINE L1 -726 5514 5355 4 1236 343 302 101 0 chr13 85350667 85350786 -34933526 - RSINE1 SINE B4 -29 136 6 4 1236 260 292 134 10 chr13 85350877 85350974 -34933338 - PB1D10 SINE Alu 0 117 9 4 1236 218 299 109 27 chr13 85351266 85351376 -34932936 - PB1 SINE Alu 0 127 9 4 1236 413 264 0 33 chr13 85351632 85351722 -34932590 - PB1D10 SINE Alu -9 108 22 4 1236 212 268 218 11 chr13 85352143 85352230 -34932082 + PB1D10 SINE Alu 13 117 0 4 1236 580 246 47 76 chr13 85358439 85358650 -34925662 + B3 SINE B2 2 206 -10 4 1236 343 296 0 0 chr13 85359655 85359736 -34924576 - ID SINE ID -141 83 3 4 1236 744 272 29 102 chr13 85359825 85360030 -34924282 - B3A SINE B2 -3 192 3 4 1236 320 268 61 0 chr13 85360209 85360291 -34924021 - PB1D10 SINE Alu -8 109 23 4 1236 444 296 59 0 chr13 85360673 85360808 -34923504 + RSINE1 SINE B4 4 146 -19 4 1236 450 0 0 0 chr13 85360822 85360872 -34923440 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1236 207 0 0 0 chr13 85361476 85361499 -34922813 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1236 1204 40 0 0 chr13 85361657 85361805 -34922507 - B1_Mus1 SINE Alu 0 148 1 4 1236 24 0 0 0 chr13 85362159 85362183 -34922129 + AT_rich Low_complexity Low_complexity 1 24 0 4 1236 235 338 13 0 chr13 85362469 85362546 -34921766 - ID4 SINE ID -1 82 5 4 1236 314 243 100 0 chr13 85363582 85363652 -34920660 - PB1D10 SINE Alu -37 80 4 4 1236 300 264 0 26 chr13 85363593 85363670 -34920642 - ID_B1 SINE B4 -148 144 71 4 1236 1705 174 52 18 chr13 85365526 85365854 -34918458 + ORR1C2 LTR MaLR 1 339 -45 4 1236 235 255 55 0 chr13 85367421 85367510 -34916802 - ID4_ SINE ID -51 101 5 4 1236 313 349 109 69 chr13 85371348 85371869 -34912443 + L1MEg LINE L1 797 1338 -4746 4 1236 286 267 75 9 chr13 85371872 85371978 -34912334 + Lx8 LINE L1 6840 6952 -521 4 1236 21 0 0 0 chr13 85373907 85373928 -34910384 + AT_rich Low_complexity Low_complexity 1 21 0 4 1236 2017 76 3 64 chr13 85374255 85374566 -34909746 - L1_Mus2 LINE L1 0 6566 6275 4 1236 225 304 0 48 chr13 85375314 85375397 -34908915 - ID4 SINE ID -4 79 1 4 1236 794 337 43 32 chr13 85375605 85375884 -34908428 - B4A SINE B4 0 292 11 4 1236 575 182 110 8 chr13 85376426 85376553 -34907759 + B1_Mur3 SINE Alu 10 149 0 4 1236 314 310 30 0 chr13 85376873 85376973 -34907339 + MIR SINE MIR 85 187 -75 4 1236 342 264 175 8 chr13 85377069 85377195 -34907117 - RSINE1 SINE B4 -14 151 5 4 1236 4972 141 61 8 chr13 85378315 85379832 -34904480 + L1VL4 LINE L1 4 1612 -1947 4 1236 4923 94 36 7 chr13 85379833 85380581 -34903731 + L1_Mus4 LINE L1 5867 6636 0 4 1236 22 35 0 0 chr13 85381004 85381033 -34903279 + AT_rich Low_complexity Low_complexity 1 29 0 4 1236 25 0 0 0 chr13 85381415 85381440 -34902872 + AT_rich Low_complexity Low_complexity 1 25 0 4 1236 1801 301 90 39 chr13 85381539 85381982 -34902330 + Lx8 LINE L1 6323 6792 -681 4 1236 476 217 48 61 chr13 85381982 85382129 -34902183 + B1_Mur2 SINE Alu 4 148 -1 4 1236 1801 301 90 39 chr13 85382129 85382573 -34901739 + Lx8 LINE L1 6793 7255 -218 4 1236 31 44 0 0 chr13 85384271 85384316 -34899996 + AT_rich Low_complexity Low_complexity 1 45 0 4 1236 878 141 223 0 chr13 85385418 85385602 -34898710 - URR1B DNA MER1_type 0 225 1 4 1236 599 195 31 54 chr13 85385730 85385860 -34898452 + B1_Mur3 SINE Alu 13 139 -10 4 1236 499 194 121 0 chr13 85386791 85386915 -34897397 + B1_Mur2 SINE Alu 4 142 -7 4 1236 220 384 152 0 chr13 85387269 85387381 -34896931 + L3 LINE CR1 4342 4470 -19 4 1236 191 61 0 29 chr13 85388204 85388238 -34896074 + (CAAAAA)n Simple_repeat Simple_repeat 1 33 0 4 1236 243 0 0 0 chr13 85388591 85388618 -34895694 + (TG)n Simple_repeat Simple_repeat 1 27 0 4 1236 311 319 188 62 chr13 85388655 85388799 -34895513 - RSINE1 SINE B4 -1 164 3 4 1236 1168 68 0 0 chr13 85389748 85389895 -34894417 + B1_Mus2 SINE Alu 1 147 0 4 1236 24 53 0 0 chr13 85389993 85390031 -34894281 + AT_rich Low_complexity Low_complexity 1 38 0 4 1236 289 0 0 0 chr13 85391932 85391976 -34892336 + L1Md_A LINE L1 6539 6582 0 4 1236 252 130 0 0 chr13 85392560 85392606 -34891706 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1236 27 29 0 0 chr13 85392675 85392709 -34891603 + AT_rich Low_complexity Low_complexity 1 34 0 4 1236 180 306 47 31 chr13 85393374 85393438 -34890874 - L4 LINE RTE -1330 699 635 4 1236 397 287 162 58 chr13 85393635 85393960 -34890352 + MLT2B4 LTR ERVL 3 335 -185 4 1236 323 107 13 39 chr13 85394628 85394706 -34889606 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 4 1236 690 331 33 40 chr13 85395087 85395361 -34888951 + B4A SINE B4 1 272 -20 4 1236 21 71 0 0 chr13 85396205 85396247 -34888065 + AT_rich Low_complexity Low_complexity 1 42 0 4 1236 1312 49 0 0 chr13 85397189 85397353 -34886959 + L1_Mus1 LINE L1 6401 6564 -3 4 1236 198 0 0 0 chr13 85397376 85397398 -34886914 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1236 624 91 0 0 chr13 85397779 85397867 -34886445 + (TA)n Simple_repeat Simple_repeat 2 89 0 5 1236 402 21 0 0 chr13 85398680 85398727 -34885585 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1236 487 301 60 27 chr13 85399166 85399316 -34884996 + ID_B1 SINE B4 70 224 0 5 1236 210 226 323 0 chr13 85399773 85399835 -34884477 + ID4_ SINE ID 2 83 0 5 1236 318 311 99 40 chr13 85399861 85400089 -34884223 + L1MEf LINE L1 847 1091 -5109 5 1236 817 299 105 6 chr13 85400089 85400422 -34883890 + ORR1D2 LTR MaLR 1 366 -4 5 1236 318 311 99 40 chr13 85400422 85400515 -34883797 + L1MEf LINE L1 1092 1186 -5014 5 1236 2934 157 45 6 chr13 85400717 85401224 -34883088 - Lx4A LINE L1 -9 7049 6523 5 1236 423 0 0 0 chr13 85401231 85401278 -34883034 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1236 210 71 0 0 chr13 85401278 85401305 -34883007 + (CG)n Simple_repeat Simple_repeat 2 29 0 5 1236 1898 133 3 3 chr13 85401314 85401623 -34882689 - L1_Mur2 LINE L1 -3826 2051 1743 5 1236 698 294 111 3 chr13 85402366 85402663 -34881649 + L1MC1 LINE L1 2 330 -6178 5 1236 445 339 85 9 chr13 85402733 85402956 -34881356 + RCHARR1 DNA MER1_type 88 327 -647 5 1236 954 69 69 0 chr13 85403004 85403135 -34881177 - B1_Mm SINE Alu -6 141 2 5 1236 608 209 174 7 chr13 85403136 85403285 -34881027 + B3 SINE B2 13 186 -30 5 1236 288 0 0 0 chr13 85403286 85403318 -34880994 + (TA)n Simple_repeat Simple_repeat 1 32 0 5 1236 276 30 0 0 chr13 85403449 85403482 -34880830 + (ATTG)n Simple_repeat Simple_repeat 2 34 0 5 1236 1060 90 0 0 chr13 85403482 85403627 -34880685 - B1_Mus1 SINE Alu -2 146 2 5 1236 1722 142 59 62 chr13 85403776 85404098 -34880214 + ORR1A4 LTR MaLR 1 321 -8 5 1236 9036 141 87 3 chr13 85404102 85405829 -34878483 + ORR1A4-int LTR MaLR 1 1770 -193 5 1236 856 108 31 0 chr13 85405802 85405932 -34878380 + ORR1A4 LTR MaLR 188 321 -8 5 1236 305 288 0 29 chr13 85405956 85406024 -34878288 + ID4_ SINE ID 1 66 -17 5 1236 642 221 95 7 chr13 85406062 85406199 -34878113 + B1_Mur2 SINE Alu 1 149 0 5 1236 549 252 227 81 chr13 85406208 85406627 -34877685 + RCHARR1 DNA MER1_type 493 973 -1 5 1236 583 285 159 51 chr13 85406679 85407226 -34877086 + L1MC1 LINE L1 431 1036 -5472 5 1236 771 208 131 0 chr13 85407229 85407412 -34876900 + B3 SINE B2 2 208 -8 5 1236 448 228 174 28 chr13 85407478 85407731 -34876581 + L1MC1 LINE L1 3461 3750 -2571 5 1236 21 57 0 0 chr13 85408048 85408083 -34876229 + AT_rich Low_complexity Low_complexity 1 35 0 5 1236 683 264 31 35 chr13 85408860 85409119 -34875193 + L1MC1 LINE L1 5903 6160 -348 5 1236 741 179 42 14 chr13 85409352 85409494 -34874818 - B1_Mur4 SINE Alu -4 146 1 5 1236 25 31 0 0 chr13 85409751 85409783 -34874529 + AT_rich Low_complexity Low_complexity 1 32 0 5 1236 2069 206 9 46 chr13 85409785 85410243 -34874069 + Lx5 LINE L1 6607 7047 -3 5 1236 24 53 0 0 chr13 85410967 85411005 -34873307 + AT_rich Low_complexity Low_complexity 1 38 0 5 1236 239 191 24 73 chr13 85411895 85412019 -34872293 + (TAAA)n Simple_repeat Simple_repeat 2 119 0 5 1236 725 282 36 64 chr13 85412023 85412273 -34872039 + B4 SINE B4 31 273 -19 5 1236 201 39 0 0 chr13 85412275 85412301 -34872011 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1236 411 289 53 7 chr13 85412444 85412617 -34871695 + L1M4 LINE L1 3481 3664 -2482 5 1236 348 305 78 17 chr13 85412677 85412857 -34871455 + L1MD2 LINE L1 5077 5267 -879 5 1236 22 35 0 0 chr13 85412863 85412892 -34871420 + AT_rich Low_complexity Low_complexity 1 29 0 5 1236 605 329 13 0 chr13 85412940 85413095 -34871217 + RSINE1 SINE B4 4 160 -5 5 1236 762 237 81 4 chr13 85413140 85413386 -34870926 + L1MD2 LINE L1 5290 5554 -688 5 1236 503 308 76 15 chr13 85413451 85413649 -34870663 + B4A SINE B4 44 253 -39 5 1236 1103 309 102 16 chr13 85413655 85414202 -34870110 + L1MD2 LINE L1 5556 6149 -210 5 1236 2498 219 74 50 chr13 85414291 85415134 -34869178 + Lx9 LINE L1 507 1369 -4478 5 1236 3483 137 145 18 chr13 85415182 85415815 -34868497 - RMER6A LTR ERVK 0 756 38 5 1236 229 26 53 0 chr13 85415815 85415853 -34868459 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 5 1236 3483 137 145 18 chr13 85415853 85415890 -34868422 - RMER6A LTR ERVK -719 37 1 5 1236 468 48 0 0 chr13 85416235 85416298 -34868014 + (CA)n Simple_repeat Simple_repeat 2 64 0 5 1236 814 211 20 125 chr13 85416518 85416870 -34867442 + Lx9 LINE L1 1325 1639 -4208 5 1236 5291 210 214 30 chr13 85416873 85419986 -34864326 + Lx9 LINE L1 3628 7476 -168 5 1236 189 121 0 0 chr13 85419986 85420019 -34864293 + (TA)n Simple_repeat Simple_repeat 1 33 0 5 1236 543 169 16 8 chr13 85420019 85420144 -34864168 + Lx9 LINE L1 7518 7643 -1 5 1236 306 0 0 0 chr13 85420173 85420207 -34864105 + (TAA)n Simple_repeat Simple_repeat 2 35 0 5 1236 6410 48 5 1 chr13 85420229 85421026 -34863286 + L1_Mus1 LINE L1 5768 6567 0 5 1236 807 196 28 0 chr13 85421071 85421214 -34863098 - B1_Mur2 SINE Alu -2 147 1 5 1236 563 340 0 0 chr13 85421466 85421622 -34862690 + RSINE1 SINE B4 2 157 -8 5 1236 1605 277 131 22 chr13 85421667 85422264 -34862048 + Lx8 LINE L1 6804 7465 -8 5 1236 216 0 0 0 chr13 85422505 85422529 -34861783 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1236 506 306 117 22 chr13 85422745 85423019 -34861293 - MLT1B LTR MaLR -66 324 25 5 1236 360 0 0 0 chr13 85423078 85423118 -34861194 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1236 477 0 0 0 chr13 85423141 85423194 -34861118 + (GAGAA)n Simple_repeat Simple_repeat 3 55 0 5 1236 567 29 0 0 chr13 85423585 85423654 -34860658 + (TG)n Simple_repeat Simple_repeat 2 70 0 5 1236 1115 211 132 12 chr13 85424485 85424811 -34859501 + RCHARR1 DNA MER1_type 610 974 0 5 1236 452 295 25 0 chr13 85424956 85425078 -34859234 + PB1 SINE Alu 1 125 -2 5 1236 301 93 37 0 chr13 85425339 85425393 -34858919 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 1236 327 304 0 0 chr13 85425576 85425645 -34858667 + ID4 SINE ID 13 81 -2 5 1236 273 270 22 0 chr13 85425753 85425842 -34858470 + Lx9 LINE L1 7520 7610 -34 5 1236 192 125 0 0 chr13 85425867 85425899 -34858413 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 1236 381 311 60 15 chr13 85426107 85426241 -34858071 + B1F SINE Alu 10 149 0 5 1236 977 192 39 19 chr13 85426279 85426486 -34857826 + B3 SINE B2 1 211 -5 5 1236 21 57 0 0 chr13 85427357 85427392 -34856920 + AT_rich Low_complexity Low_complexity 1 35 0 5 1236 26 0 0 0 chr13 85428443 85428469 -34855843 + GC_rich Low_complexity Low_complexity 1 26 0 5 1236 23 33 0 0 chr13 85428646 85428676 -34855636 + GC_rich Low_complexity Low_complexity 1 30 0 5 1236 215 323 15 8 chr13 85428843 85428977 -34855335 + (CCG)n Simple_repeat Simple_repeat 1 135 0 5 1236 259 266 145 23 chr13 85429936 85430067 -34854245 - MER2 DNA MER2_type -81 264 118 5 1236 238 247 189 11 chr13 85430578 85430668 -34853644 + MER5A DNA MER1_type 84 189 0 5 1236 405 0 0 0 chr13 85431421 85431466 -34852846 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1236 850 194 35 137 chr13 85431552 85431779 -34852533 - B3 SINE B2 -11 205 2 5 1236 1169 90 35 12 chr13 85432033 85432202 -34852110 + ORR1A1 LTR MaLR 133 305 -41 5 1236 5992 75 30 5 chr13 85432202 85433725 -34850587 + L1VL2 LINE L1 263 1826 -1789 5 1236 261 315 34 0 chr13 85433868 85433957 -34850355 - PB1D7 SINE Alu -2 118 27 5 1236 42 20 0 0 chr13 85434699 85434748 -34849564 + AT_rich Low_complexity Low_complexity 1 49 0 5 1236 872 226 223 10 chr13 85435472 85435780 -34848532 - ORR1D1 LTR MaLR -1 373 1 5 1236 1353 151 49 4 chr13 85435780 85436026 -34848286 - ORR1D1-int LTR MaLR 0 1370 1114 5 1236 378 217 0 61 chr13 85436428 85436526 -34847786 - ORR1D1-int LTR MaLR -1278 92 1 5 1236 977 225 181 4 chr13 85436526 85436785 -34847527 - ORR1D1 LTR MaLR 0 374 70 5 1236 1461 261 29 78 chr13 85436958 85437470 -34846842 + RLTR16 LTR ERVK 1 487 -18 5 1236 17488 97 24 9 chr13 85438958 85440231 -34844081 - L1VL4 LINE L1 0 3559 2300 5 1236 446 0 19 0 chr13 85440231 85440285 -34844027 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 5 1236 17488 99 24 12 chr13 85440285 85442306 -34842006 - L1VL4 LINE L1 -1260 2299 219 5 1236 3086 63 0 15 chr13 85442578 85442980 -34841332 - MTA_Mm LTR MaLR 0 396 1 5 1236 511 267 19 68 chr13 85442984 85443145 -34841167 + RMER1C Other Other 416 568 -774 5 1236 1827 272 118 57 chr13 85443151 85444247 -34840065 + L1_Mur3 LINE L1 4244 5406 -474 5 1236 1942 266 16 15 chr13 85444436 85445029 -34839283 + MuRRS4-int LTR ERV1 3533 4014 -1049 5 1236 798 300 66 44 chr13 85445466 85445982 -34838330 + MuRRS4-int LTR ERV1 4544 5020 -43 5 1236 2353 86 134 2 chr13 85445984 85446380 -34837932 + RLTR47_MM LTR ERV1 1 448 -84 5 1236 207 0 0 0 chr13 85446395 85446418 -34837894 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1236 287 265 29 67 chr13 85446426 85446531 -34837781 + L1_Mur3 LINE L1 5393 5493 -384 5 1236 2769 244 50 79 chr13 85446531 85447543 -34836769 - Lx9 LINE L1 0 7644 6662 5 1236 460 269 17 9 chr13 85447618 85447734 -34836578 + PB1D10 SINE Alu 1 117 0 5 1236 386 330 118 9 chr13 85448162 85448373 -34835939 + MER2 DNA MER2_type 1 234 -111 5 1236 1889 157 78 48 chr13 85448494 85448598 -34835714 + RLTR20D LTR ERVK 1 91 -477 5 1236 666 66 321 0 chr13 85448598 85448704 -34835608 + B1_Mus1 SINE Alu 1 140 -8 5 1236 276 77 0 0 chr13 85448704 85448743 -34835569 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1236 1889 164 83 52 chr13 85448743 85449030 -34835282 + RLTR20D LTR ERVK 64 410 -95 5 1236 621 90 0 0 chr13 85449030 85449119 -34835193 + (TG)n Simple_repeat Simple_repeat 2 90 0 5 1236 892 261 156 103 chr13 85449119 85449200 -34835112 + RLTR20D LTR ERVK 411 498 -7 5 1236 802 339 97 28 chr13 85449637 85450200 -34834112 - MLT1E3 LTR MaLR -5 675 7 5 1236 189 107 0 0 chr13 85450247 85450275 -34834037 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1236 24 0 0 0 chr13 85451119 85451143 -34833169 + AT_rich Low_complexity Low_complexity 1 24 0 5 1236 543 162 0 0 chr13 85452108 85452207 -34832105 + GA-rich Low_complexity Low_complexity 2 100 0 5 1236 242 214 0 18 chr13 85452282 85452339 -34831973 + B4 SINE B4 6 61 -231 5 1236 774 48 0 0 chr13 85452341 85452445 -34831867 + B1_Mus1 SINE Alu 33 136 -12 5 1236 1201 50 0 12 chr13 85452445 85452608 -34831704 + (GAAA)n Simple_repeat Simple_repeat 1 161 0 5 1236 640 317 12 84 chr13 85452609 85452860 -34831452 + B4A SINE B4 57 289 -3 5 1236 320 140 45 23 chr13 85453005 85453093 -34831219 + (CATA)n Simple_repeat Simple_repeat 3 92 0 5 1236 22 0 0 0 chr13 85453131 85453153 -34831159 + AT_rich Low_complexity Low_complexity 1 22 0 5 1236 541 171 27 45 chr13 85453448 85453558 -34830754 + MT2A LTR ERVL 6 113 -420 5 1236 364 247 0 0 chr13 85453563 85453636 -34830676 + MT2A LTR ERVL 85 157 -376 5 1236 1184 216 44 104 chr13 85453636 85454049 -34830263 - L1_Mur2 LINE L1 -6012 700 313 5 1236 226 347 0 62 chr13 85454420 85454549 -34829763 + MLT1H-int LTR MaLR 1058 1178 -231 5 1236 32 26 0 0 chr13 85454811 85454850 -34829462 + AT_rich Low_complexity Low_complexity 1 39 0 6 1236 2137 211 64 66 chr13 85454885 85455185 -34829127 + RLTR31_Mm LTR ERVK 1 311 -250 6 1236 396 0 0 0 chr13 85455185 85455229 -34829083 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1236 2137 211 64 66 chr13 85455229 85455490 -34828822 + RLTR31_Mm LTR ERVK 312 560 -1 6 1236 189 0 0 0 chr13 85455563 85455584 -34828728 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 6 1236 7931 59 1 1 chr13 85455786 85456798 -34827514 + L1Md_F2 LINE L1 4574 5585 -298 6 1236 8049 46 3 3 chr13 85456799 85457794 -34826518 + L1Md_F2 LINE L1 5587 6581 -1 6 1236 528 168 0 0 chr13 85458130 85458255 -34826057 + (CA)n Simple_repeat Simple_repeat 1 125 0 6 1236 343 256 89 30 chr13 85458259 85458455 -34825857 + L1MC LINE L1 1976 2075 -783 6 1237 753 191 211 11 chr13 85459426 85459601 -34824711 + B3 SINE B2 1 210 -6 6 1237 887 160 7 0 chr13 85459695 85459845 -34824467 + L1_Mur3 LINE L1 2109 2259 -3621 6 1237 1508 180 46 86 chr13 85459845 85460216 -34824096 - ORR1B1 LTR MaLR -2 392 37 6 1237 2846 194 79 7 chr13 85460216 85460939 -34823373 + L1_Mur3 LINE L1 2270 3044 -2836 6 1237 503 152 74 22 chr13 85460936 85461071 -34823241 - L1_Mur3 LINE L1 -2689 3191 3050 6 1237 5140 132 7 11 chr13 85461079 85462438 -34821874 - Lx3C LINE L1 -575 6401 5053 6 1237 3870 112 17 2 chr13 85462448 85463012 -34821300 + L1_Mur1 LINE L1 4067 4632 -1254 6 1237 243 0 0 0 chr13 85463012 85463039 -34821273 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1237 3870 112 17 2 chr13 85463039 85463065 -34821247 + L1_Mur1 LINE L1 4633 4666 -1220 6 1237 40686 15 1 6 chr13 85463066 85469673 -34814639 - L1Md_A LINE L1 0 6582 16 6 1237 1808 116 44 3 chr13 85469670 85469963 -34814349 + L1_Mur1 LINE L1 4653 4957 -929 6 1237 258 281 132 47 chr13 85470202 85470437 -34813875 - L1_Mur3 LINE L1 -3420 2460 2206 6 1237 308 284 92 88 chr13 85470701 85470810 -34813502 - L1MEg LINE L1 -4607 1477 1369 6 1237 693 92 0 0 chr13 85470810 85470908 -34813404 + (TCCCC)n Simple_repeat Simple_repeat 4 101 0 6 1237 308 284 92 88 chr13 85470908 85471060 -34813252 - L1MEg LINE L1 -4716 1368 1215 6 1237 21 36 0 0 chr13 85472009 85472037 -34812275 + AT_rich Low_complexity Low_complexity 1 28 0 6 1237 378 262 92 78 chr13 85472093 85472246 -34812066 - MLT1B LTR MaLR -13 377 223 6 1237 334 356 21 31 chr13 85473008 85473202 -34811110 - L1MC3 LINE L1 -1 7784 7593 6 1237 514 250 22 0 chr13 85473254 85473390 -34810922 + MER54A LTR ERVL 1 139 -762 6 1237 360 0 0 0 chr13 85473392 85473432 -34810880 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1237 308 316 43 17 chr13 85473441 85473557 -34810755 + MER54A LTR ERVL 273 391 -510 6 1237 948 175 44 29 chr13 85473557 85473763 -34810549 - RLTR18-int LTR ERVK -1038 4323 4115 6 1237 830 294 78 10 chr13 85474046 85474342 -34809970 - RLTR18-int LTR ERVK -2951 2410 2095 6 1237 952 239 73 28 chr13 85474731 85475019 -34809293 - RLTR18-int LTR ERVK -5059 302 2 6 1237 927 175 0 0 chr13 85475056 85475207 -34809105 - RLTR18B LTR ERVK -89 527 330 6 1237 2644 95 8 3 chr13 85475207 85475587 -34808725 - L1_Mus3 LINE L1 -3 6635 6254 6 1237 252 369 9 9 chr13 85475587 85475608 -34808704 - RLTR18B LTR ERVK -180 436 417 6 1237 14589 176 171 65 chr13 85475610 85475683 -34808629 - L1VL4 LINE L1 -137 5740 5671 6 1237 1033 82 0 52 chr13 85475683 85475837 -34808475 + B1_Mm SINE Alu 1 146 -1 6 1237 14589 176 171 65 chr13 85475837 85475974 -34808338 - L1VL4 LINE L1 -207 5670 5529 6 1237 5518 136 48 12 chr13 85475974 85476899 -34807413 - RMER17B LTR ERVK 0 958 1 6 1237 14589 176 171 65 chr13 85476899 85477509 -34806803 - L1VL4 LINE L1 -349 5528 5094 6 1237 1066 116 0 0 chr13 85477509 85477656 -34806656 - B1_Mus2 SINE Alu 0 147 1 6 1237 14589 172 159 63 chr13 85477656 85481019 -34803293 - L1VL4 LINE L1 -784 5093 1121 6 1237 7627 65 5 1 chr13 85481061 85482111 -34802201 - L1_Mus1 LINE L1 0 6567 5514 6 1237 10462 160 27 5 chr13 85482101 85484804 -34799508 + Lx LINE L1 3897 6654 0 6 1237 342 0 0 0 chr13 85484831 85484869 -34799443 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1237 339 25 0 0 chr13 85485457 85485497 -34798815 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1237 392 317 19 0 chr13 85485513 85485617 -34798695 - B3A SINE B2 -84 114 9 6 1237 489 309 177 52 chr13 85485738 85486179 -34798133 - MLT1D LTR MaLR -7 498 3 6 1237 331 280 56 126 chr13 85486562 85486705 -34797607 + RSINE1 SINE B4 3 135 -30 6 1237 487 241 102 41 chr13 85487085 85487232 -34797080 - RSINE1 SINE B4 -8 157 2 6 1237 429 322 232 36 chr13 85487354 85487798 -34796514 - MT2A LTR ERVL -2 531 1 6 1237 197 309 113 68 chr13 85488048 85488225 -34796087 - MIRb SINE MIR -67 201 17 6 1237 304 312 81 64 chr13 85488477 85488793 -34795519 - MLT1A1 LTR MaLR -35 373 1 6 1237 1431 229 104 40 chr13 85489108 85489462 -34794850 + MTD LTR MaLR 43 419 0 6 1237 947 228 28 113 chr13 85489488 85489770 -34794542 - ORR1D2 LTR MaLR -110 260 3 6 1237 277 342 35 64 chr13 85489865 85490037 -34794275 + MER113 DNA MER1_type 2 168 -353 6 1237 1223 101 4 4 chr13 85491008 85491261 -34793051 + (TTTC)n Simple_repeat Simple_repeat 1 253 0 6 1237 1036 69 21 0 chr13 85491261 85491406 -34792906 - B1_Mus1 SINE Alu 0 148 1 6 1237 782 228 48 21 chr13 85493322 85493529 -34790783 - MTD LTR MaLR -18 401 196 6 1237 7378 51 4 12 chr13 85493544 85494490 -34789822 - L1_Mus1 LINE L1 -3 6564 5626 6 1237 888 254 80 0 chr13 85494491 85494692 -34789620 - MTD LTR MaLR -202 217 1 6 1237 27 0 0 0 chr13 85494981 85495008 -34789304 + AT_rich Low_complexity Low_complexity 1 27 0 6 1237 2503 78 106 19 chr13 85495666 85496034 -34788278 + MTB LTR MaLR 1 400 0 6 1237 215 143 24 0 chr13 85497779 85497821 -34786491 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1237 355 365 60 54 chr13 85497966 85498316 -34785996 + LTR16C LTR ERVL 39 390 -99 6 1237 227 320 108 20 chr13 85501168 85501270 -34783042 - MER96B DNA hAT -15 402 292 1 1237 314 248 50 13 chr13 85501722 85501823 -34782489 - ID2 SINE ID -36 116 8 2 1237 369 341 23 40 chr13 85502457 85502551 -34781761 + MLT1B LTR MaLR 204 293 -97 3 1237 3642 20 121 0 chr13 85502551 85502991 -34781321 - MT2_Mm LTR ERVL 0 493 1 4 1237 369 341 23 40 chr13 85502991 85503070 -34781242 + MLT1B LTR MaLR 294 373 -17 3 1237 258 372 7 0 chr13 85503455 85503592 -34780720 + (TGGG)n Simple_repeat Simple_repeat 1 138 0 5 1237 201 372 38 38 chr13 85503674 85503833 -34780479 + MIR SINE MIR 94 252 -10 6 1237 522 0 0 0 chr13 85504222 85504280 -34780032 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1237 254 182 0 2 chr13 85505267 85505325 -34778987 - L1MA5 LINE L1 -24 6276 6218 8 1237 220 173 13 51 chr13 85505325 85505404 -34778908 + (TTATA)n Simple_repeat Simple_repeat 4 79 0 9 1237 1056 291 82 40 chr13 85505430 85505759 -34778553 - RLTR20B3 LTR ERVK -56 521 179 1 1237 27715 104 15 12 chr13 85505883 85509322 -34774990 - L1_Mus2 LINE L1 -3 6563 3180 1 1237 250 45 22 22 chr13 85509322 85509367 -34774945 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 1 1237 27715 121 11 26 chr13 85509367 85512189 -34772123 - L1_Mus2 LINE L1 -2704 3179 356 1 1237 262 242 65 11 chr13 85513054 85513146 -34771166 + RMER10A LTR ERVL 346 442 0 1 1237 612 0 0 0 chr13 85513156 85513224 -34771088 + (TC)n Simple_repeat Simple_repeat 2 69 0 1 1237 925 257 51 129 chr13 85513956 85514367 -34769945 + MTEb LTR MaLR 1 379 0 1 1237 702 286 24 19 chr13 85514367 85514577 -34769735 + MTEb-int LTR MaLR 1 211 -1369 1 1237 441 325 130 46 chr13 85514618 85514857 -34769455 + MTEb-int LTR MaLR 460 718 -862 1 1237 404 231 130 49 chr13 85514870 85514993 -34769319 + B3 SINE B2 81 213 -3 1 1237 441 229 8 32 chr13 85515126 85515252 -34769060 + RLTR28 LTR ERVL 389 511 -13 1 1237 286 386 41 0 chr13 85515577 85515748 -34768564 + L2a LINE L2 2965 3142 -284 1 1237 217 312 29 59 chr13 85517276 85517412 -34766900 - MIRb SINE MIR -111 157 26 1 1237 312 320 19 19 chr13 85518647 85518752 -34765560 - L1M5 LINE L1 -1441 4705 4601 2 1237 392 214 101 17 chr13 85518867 85518986 -34765326 - RMER5 LTR ERV1 -405 129 1 2 1237 1693 263 26 26 chr13 85519181 85519649 -34764663 - Lx5 LINE L1 -684 6366 5899 2 1237 3137 206 12 34 chr13 85519653 85520332 -34763980 + Lx5 LINE L1 6382 7045 -5 2 1237 26 30 0 0 chr13 85520434 85520467 -34763845 + AT_rich Low_complexity Low_complexity 1 33 0 2 1237 21 82 0 0 chr13 85520880 85520929 -34763383 + AT_rich Low_complexity Low_complexity 1 49 0 2 1237 189 0 0 0 chr13 85521175 85521196 -34763116 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1237 806 296 20 84 chr13 85521217 85521424 -34762888 - B4A SINE B4 0 292 101 2 1237 1972 108 33 42 chr13 85521424 85521754 -34762558 + ORR1A2 LTR MaLR 1 327 0 2 1237 806 296 20 84 chr13 85521754 85521845 -34762467 - B4A SINE B4 -192 100 13 2 1237 4224 117 55 22 chr13 85521985 85522786 -34761526 + L1VL4 LINE L1 190 1027 -2532 2 1237 4727 46 2 0 chr13 85522783 85523445 -34760867 + L1Md_F2 LINE L1 5519 6181 -401 2 1237 1902 42 13 0 chr13 85523447 85523684 -34760628 + L1Md_F2 LINE L1 6343 6582 0 2 1237 1525 92 5 14 chr13 85523685 85523906 -34760406 + MTB LTR MaLR 182 400 0 3 1237 5189 114 5 23 chr13 85523911 85525012 -34759300 + L1_Mur1 LINE L1 2788 3870 -2016 3 1237 2292 181 78 20 chr13 85525013 85525641 -34758671 - RLTR13D3 LTR ERVK -1 1113 1 3 1237 10931 148 9 4 chr13 85525641 85528407 -34755905 + Lx2 LINE L1 3862 6642 -355 3 1237 868 169 30 0 chr13 85528411 85528577 -34755735 + Lx2 LINE L1 6787 6957 -40 3 1237 931 174 6 6 chr13 85528577 85528745 -34755567 - RMER16 LTR ERVK 0 533 366 3 1237 977 208 14 46 chr13 85528851 85529068 -34755244 - B3 SINE B2 -6 210 1 3 1237 768 289 88 50 chr13 85530718 85530740 -34753572 - B4A SINE B4 0 292 276 3 1237 618 14 0 0 chr13 85530740 85530811 -34753501 + (TC)n Simple_repeat Simple_repeat 2 72 0 3 1237 216 0 0 0 chr13 85530811 85530834 -34753478 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1237 768 289 88 50 chr13 85530834 85531072 -34753240 - B4A SINE B4 -17 275 22 3 1237 833 29 10 0 chr13 85531445 85531549 -34752763 + (TA)n Simple_repeat Simple_repeat 1 105 0 3 1237 3001 64 18 15 chr13 85531585 85531984 -34752328 - MTB LTR MaLR 0 400 1 4 1237 204 102 20 39 chr13 85533390 85533441 -34750871 + (TTA)n Simple_repeat Simple_repeat 3 52 0 4 1237 24 32 0 0 chr13 85533787 85533818 -34750494 + AT_rich Low_complexity Low_complexity 1 31 0 4 1237 257 224 17 0 chr13 85534088 85534146 -34750166 + CT-rich Low_complexity Low_complexity 2 60 0 4 1237 612 91 0 0 chr13 85534674 85534762 -34749550 + (TTCC)n Simple_repeat Simple_repeat 4 91 0 4 1237 688 225 136 12 chr13 85534848 85535010 -34749302 - B3 SINE B2 0 216 35 4 1237 3956 36 0 0 chr13 85535762 85536229 -34748083 - L1Md_T LINE L1 0 6582 6116 4 1237 493 50 0 0 chr13 85536229 85536301 -34748011 + L1Md_A LINE L1 6018 6089 -549 4 1237 2843 212 29 87 chr13 85536462 85537311 -34747001 + Lx7 LINE L1 6895 7694 -2 4 1237 633 115 0 0 chr13 85537381 85537477 -34746835 + (TA)n Simple_repeat Simple_repeat 2 97 0 4 1237 203 167 0 0 chr13 85537716 85537758 -34746554 + A-rich Low_complexity Low_complexity 2 43 0 5 1237 226 384 80 0 chr13 85539132 85539244 -34745068 - B4 SINE B4 -86 206 86 5 1237 360 175 238 26 chr13 85539717 85539884 -34744428 - Lx4B LINE L1 -6 7052 6867 5 1237 241 246 0 15 chr13 85540147 85540213 -34744099 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 1237 332 140 0 0 chr13 85540215 85540265 -34744047 - HAL1-3A_ME LINE L1 -840 2018 1969 5 1237 1108 214 99 18 chr13 85541537 85541879 -34742433 + Lx2B LINE L1 6618 6987 -13 5 1237 369 321 14 0 chr13 85541995 85542135 -34742177 + CT-rich Low_complexity Low_complexity 1 142 0 5 1237 372 278 121 117 chr13 85542378 85542626 -34741686 - ORR1E LTR MaLR -83 301 57 5 1237 3278 152 174 17 chr13 85542691 85543328 -34740984 - RMER13A LTR ERVK -123 737 1 5 1237 2522 81 108 3 chr13 85543715 85544087 -34740225 - IAPLTR2a LTR ERVK 0 411 1 5 1237 14474 38 3 3 chr13 85544087 85545890 -34738422 - IAPEz-int LTR ERVK 0 6481 4678 5 1237 1779 89 0 0 chr13 85545908 85546154 -34738158 - IAPEz-int LTR ERVK -5183 2497 2252 6 1237 954 42 0 0 chr13 85546155 85546274 -34738038 - IAPEz-int LTR ERVK -5004 1477 1359 6 1237 4736 50 21 36 chr13 85546274 85546938 -34737374 - IAPEz-int LTR ERVK -5819 662 9 6 1237 2716 86 9 51 chr13 85546939 85547368 -34736944 - IAPLTR2a LTR ERVK 0 411 1 6 1237 653 325 74 26 chr13 85547800 85548110 -34736202 - MER58B DNA MER1_type -15 326 2 6 1237 226 380 21 21 chr13 85548448 85548542 -34735770 - ORR1D2 LTR MaLR -187 183 90 6 1237 826 335 36 103 chr13 85548677 85548928 -34735384 - MTE-int LTR MaLR -34 1546 1298 6 1237 4362 108 17 2 chr13 85548928 85549562 -34734750 - L1_Mus3 LINE L1 -6 6632 5989 6 1237 826 335 36 103 chr13 85549562 85549699 -34734613 - MTE-int LTR MaLR -283 1297 1184 6 1237 451 328 6 17 chr13 85549782 85549959 -34734353 - MTE-int LTR MaLR -1292 288 114 6 1237 21 36 0 0 chr13 85551376 85551404 -34732908 + AT_rich Low_complexity Low_complexity 1 28 0 6 1237 240 371 100 0 chr13 85551509 85551649 -34732663 + MIRb SINE MIR 9 162 -106 6 1237 576 271 72 22 chr13 85552207 85552388 -34731924 + B4 SINE B4 1 190 -102 6 1237 3049 157 46 29 chr13 85552513 85553098 -34731214 - RLTR17 LTR ERVK 0 692 98 6 1237 3101 215 74 35 chr13 85553170 85553936 -34730376 - Lx9 LINE L1 -668 6976 6166 6 1237 1244 93 11 21 chr13 85553936 85554122 -34730190 - B2_Mm2 SINE B2 -9 186 3 7 1237 3101 343 52 45 chr13 85554122 85554453 -34729859 - Lx9 LINE L1 -1479 6165 5735 6 1237 2071 173 95 99 chr13 85554460 85554999 -34729313 + RMER19C LTR ERVK 1 607 -4 7 1237 1149 210 66 22 chr13 85555012 85555329 -34728983 - Lx9 LINE L1 -156 5691 5361 6 1237 182 167 0 0 chr13 85555375 85555405 -34728907 + L3 LINE CR1 2532 2561 -1928 7 1237 342 0 0 0 chr13 85555432 85555470 -34728842 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 7 1237 882 242 5 19 chr13 85557585 85557796 -34726516 - B3 SINE B2 -8 208 1 7 1237 21 0 0 0 chr13 85557882 85557903 -34726409 + AT_rich Low_complexity Low_complexity 1 21 0 7 1237 28 0 0 0 chr13 85558141 85558169 -34726143 + AT_rich Low_complexity Low_complexity 1 28 0 7 1237 232 137 19 19 chr13 85558786 85558838 -34725474 + GA-rich Low_complexity Low_complexity 1 52 0 7 1237 249 296 14 0 chr13 85559197 85559268 -34725044 + G-rich Low_complexity Low_complexity 4 75 0 7 1237 234 270 0 21 chr13 85559713 85559800 -34724512 + CT-rich Low_complexity Low_complexity 1 85 0 7 1237 1019 267 34 87 chr13 85559816 85560173 -34724139 - MTE2a LTR MaLR -41 338 1 8 1237 676 254 229 83 chr13 85560457 85560855 -34723457 + RMER20B LTR ERVK 36 491 -136 8 1237 36 40 0 0 chr13 85560951 85561001 -34723311 + AT_rich Low_complexity Low_complexity 1 50 0 8 1237 31 44 0 0 chr13 85561060 85561105 -34723207 + AT_rich Low_complexity Low_complexity 1 45 0 8 1237 23 0 0 0 chr13 85561292 85561315 -34722997 + AT_rich Low_complexity Low_complexity 1 23 0 8 1237 2309 160 17 53 chr13 85561376 85562156 -34722156 - RMER6A LTR ERVK -7 749 57 8 1237 508 275 30 0 chr13 85562322 85562453 -34721859 + B1_Mur1 SINE Alu 2 136 -13 8 1237 5176 48 2 3 chr13 85562456 85563098 -34721214 - L1Md_F3 LINE L1 0 6584 5944 8 1237 3401 172 59 11 chr13 85563314 85563927 -34720385 + RLTR26 LTR ERVK 1 642 0 8 1237 21 0 0 0 chr13 85564029 85564050 -34720262 + AT_rich Low_complexity Low_complexity 1 21 0 8 1237 1801 203 23 13 chr13 85564303 85564687 -34719625 + Lx3C LINE L1 6587 6974 -2 9 1237 992 296 102 39 chr13 85564933 85565569 -34718743 + RMER1C Other Other 30 705 -637 9 1237 405 39 0 0 chr13 85565599 85565650 -34718662 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 1237 303 28 0 0 chr13 85565982 85566018 -34718294 + (GA)n Simple_repeat Simple_repeat 2 37 0 9 1237 21 71 0 0 chr13 85566177 85566219 -34718093 + AT_rich Low_complexity Low_complexity 1 42 0 9 1237 4104 140 95 1 chr13 85566654 85567328 -34716984 + RMER19A LTR ERVK 1 737 0 9 1237 194 62 31 0 chr13 85567403 85567435 -34716877 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 9 1237 2114 140 22 11 chr13 85568426 85568781 -34715531 + RLTR15 LTR ERVK 1 359 0 9 1237 224 391 73 56 chr13 85569134 85569546 -34714766 - L2 LINE L2 -475 2944 2526 9 1237 612 0 0 0 chr13 85570021 85570089 -34714223 + (GAAA)n Simple_repeat Simple_repeat 4 71 0 9 1237 24 0 0 0 chr13 85570152 85570176 -34714136 + AT_rich Low_complexity Low_complexity 1 24 0 1 1237 276 285 278 23 chr13 85570667 85570843 -34713469 + MIR SINE MIR 10 230 -32 1 1237 202 192 77 0 chr13 85570880 85570932 -34713380 - L2a LINE L2 -39 3387 3332 1 1237 230 236 0 52 chr13 85572037 85572095 -34712217 + polypyrimidine Low_complexity Low_complexity 4 58 0 1 1237 261 0 0 0 chr13 85572215 85572244 -34712068 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 1237 1204 42 0 7 chr13 85572247 85572391 -34711921 - B1_Mus2 SINE Alu -4 143 1 1 1237 488 0 0 0 chr13 85572422 85572483 -34711829 + L1Md_T LINE L1 6521 6581 -1 1 1237 2696 104 4 64 chr13 85572598 85573050 -34711262 - Lx LINE L1 -6 6648 6224 1 1237 198 0 0 0 chr13 85574366 85574388 -34709924 + (TG)n Simple_repeat Simple_repeat 2 23 0 1 1237 707 356 12 28 chr13 85574397 85574651 -34709661 - B4A SINE B4 -41 251 2 1 1237 25 31 0 0 chr13 85574651 85574683 -34709629 + AT_rich Low_complexity Low_complexity 1 32 0 1 1237 944 215 42 10 chr13 85575561 85575754 -34708558 + B3 SINE B2 3 201 -15 1 1237 413 286 47 9 chr13 85576166 85576272 -34708040 + B4A SINE B4 182 291 -1 1 1237 21 57 0 0 chr13 85576915 85576950 -34707362 + AT_rich Low_complexity Low_complexity 1 35 0 1 1237 1752 157 114 116 chr13 85578113 85578560 -34705752 + RLTR41 LTR ERV1 1 446 0 1 1237 4630 177 53 2 chr13 85579919 85580730 -34703582 + RMER13A LTR ERVK 9 860 0 1 1237 537 194 144 109 chr13 85580728 85580930 -34703382 + URR1A DNA MER1_type 4 212 -14 1 1237 2679 159 85 8 chr13 85581011 85581530 -34702782 - MurERV4_19-int LTR ERVK -5221 559 1 1 1237 2243 171 127 87 chr13 85581530 85582114 -34702198 - RMER19C LTR ERVK 0 611 5 1 1237 1524 174 85 90 chr13 85582116 85582539 -34701773 - RMER16 LTR ERVK 0 533 113 1 1237 706 146 66 58 chr13 85583032 85583261 -34701051 - RMER17B LTR ERVK -245 564 306 1 1237 944 231 44 0 chr13 85584889 85585092 -34699220 - B3 SINE B2 -2 214 3 1 1237 4978 51 5 11 chr13 85585182 85585815 -34698497 + L1Md_F2 LINE L1 5954 6582 0 1 1237 381 104 13 25 chr13 85586206 85586285 -34698027 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1237 863 288 28 11 chr13 85586621 85587167 -34697145 - L1M2 LINE L1 -559 6443 5875 1 1237 22 0 0 0 chr13 85587217 85587239 -34697073 + AT_rich Low_complexity Low_complexity 1 22 0 1 154 29465 114 14 13 chr13 85587256 85593429 -34690883 - L1_Mus1 LINE L1 -1 6566 387 1 1238 486 340 6 95 chr13 85593458 85593637 -34690675 - RSINE1 SINE B4 0 165 3 1 1238 390 311 34 53 chr13 85593749 85594105 -34690207 - L1M2 LINE L1 -1175 5670 5322 1 1238 731 309 121 65 chr13 85594161 85595176 -34689136 - L1M2 LINE L1 -1977 4865 3794 1 1238 230 202 59 12 chr13 85595350 85595435 -34688877 - Lx9 LINE L1 -133 7511 7423 1 1238 346 299 134 0 chr13 85595439 85595536 -34688776 - B3A SINE B2 -83 112 3 1 1238 226 252 26 26 chr13 85595599 85595713 -34688599 - L1M2 LINE L1 -3117 3728 3615 1 1238 339 347 47 7 chr13 85595824 85595972 -34688340 - B3A SINE B2 0 198 45 1 1238 243 79 0 0 chr13 85595983 85596021 -34688291 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1238 492 303 91 20 chr13 85596024 85596434 -34687878 - L1M2 LINE L1 -3392 3453 2995 1 1238 29 60 0 0 chr13 85596493 85596543 -34687769 + AT_rich Low_complexity Low_complexity 1 50 0 1 1238 2683 100 64 11 chr13 85596554 85596973 -34687339 + RMER16 LTR ERVK 1 530 -3 1 1238 1483 166 74 96 chr13 85597006 85597425 -34686887 - RMER17C LTR ERVK 0 410 1 1 1238 621 284 38 13 chr13 85597430 85597587 -34686725 - B3 SINE B2 -53 163 3 1 1238 1270 88 27 16 chr13 85597793 85597977 -34686335 - B2_Mm2 SINE B2 -7 188 3 1 1238 23 33 0 0 chr13 85598046 85598076 -34686236 + AT_rich Low_complexity Low_complexity 1 30 0 1 1238 1607 209 107 29 chr13 85598147 85598532 -34685780 + MTC LTR MaLR 5 419 -2 1 1238 189 0 0 0 chr13 85598533 85598554 -34685758 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 1 1238 387 0 0 0 chr13 85598555 85598598 -34685714 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1238 285 75 0 0 chr13 85598598 85598637 -34685675 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1238 253 281 44 34 chr13 85598640 85598864 -34685448 - L1M2 LINE L1 -4149 2433 2152 1 1238 2138 122 151 5 chr13 85598864 85599276 -34685036 - RLTR47_MM LTR ERV1 0 532 61 1 1238 462 298 66 27 chr13 85600780 85600963 -34683349 + RLTR11A2 LTR ERVK 1 190 -337 1 1238 1114 76 0 0 chr13 85601559 85601704 -34682608 + B1_Mus2 SINE Alu 1 145 -2 1 1238 3381 201 64 5 chr13 85601795 85602606 -34681706 - Lx9 LINE L1 -2 7642 6784 1 1238 39354 12 0 2 chr13 85602613 85610218 -34674094 - L1Md_A LINE L1 0 6582 1 1 1238 1357 242 213 8 chr13 85610205 85610730 -34673582 - Lx9 LINE L1 -840 6804 6172 1 1238 2472 86 8 38 chr13 85610733 85611130 -34673182 - Lx2 LINE L1 -1007 5990 5606 1 1238 2186 189 33 26 chr13 85611130 85611660 -34672652 - RLTR31A_Mm LTR ERVK 0 561 1 1 1238 1197 178 61 0 chr13 85611661 85611908 -34672404 - L1_Mm LINE L1 -273 5610 5349 1 1238 3679 108 8 10 chr13 85611904 85612925 -34671387 - L1VL4 LINE L1 -2138 1421 402 1 1238 1277 261 30 22 chr13 85612927 85613334 -34670978 - Lx9 LINE L1 -129 5718 5309 1 1238 753 267 96 32 chr13 85613344 85613566 -34670746 - MT2A LTR ERVL -145 456 92 1 1238 194 75 55 36 chr13 85614128 85614183 -34670129 + T-rich Low_complexity Low_complexity 5 60 0 1 1238 2235 115 12 0 chr13 85614437 85614758 -34669554 - ORR1A2 LTR MaLR 0 327 3 1 1238 4976 63 16 8 chr13 85618371 85619039 -34665273 - L1_Mus3 LINE L1 -3 6635 5962 1 1238 281 70 0 0 chr13 85619039 85619082 -34665230 + L1_Mus3 LINE L1 5909 5951 -687 1 1238 369 306 112 8 chr13 85619153 85619278 -34665034 - B1F1 SINE Alu 0 149 12 1 1238 373 109 0 23 chr13 85619920 85619986 -34664326 - B2_Mm2 SINE B2 -107 109 47 1 1238 1083 296 8 8 chr13 85620120 85620362 -34663950 - B4 SINE B4 -49 243 2 1 1238 1758 221 72 85 chr13 85620411 85621137 -34663175 - RMER6D LTR ERVK -4 716 1 1 1238 1144 201 134 41 chr13 85621354 85621543 -34662769 - ORR1D1 LTR MaLR 0 374 178 1 1238 672 36 0 0 chr13 85621543 85621626 -34662686 + (GGGAGA)n Simple_repeat Simple_repeat 5 87 0 1 1238 1144 201 134 41 chr13 85621626 85621778 -34662534 - ORR1D1 LTR MaLR -197 177 1 1 1238 2673 228 108 40 chr13 85621781 85622532 -34661780 - ORR1D1-int LTR MaLR -10 1360 559 1 1238 2160 214 147 22 chr13 85622598 85623143 -34661169 - RMER20B LTR ERVK -14 613 1 1 1238 1631 230 118 23 chr13 85623143 85623625 -34660687 - ORR1D1-int LTR MaLR -807 563 36 1 1238 510 245 9 0 chr13 85623785 85623891 -34660421 - B3 SINE B2 -107 109 3 1 1238 201 333 99 0 chr13 85624060 85624141 -34660171 - MIRm SINE MIR -15 261 173 1 1238 1245 150 101 4 chr13 85625293 85625540 -34658772 + Lx4A LINE L1 6786 7056 -2 1 1238 2913 100 0 2 chr13 85626030 85626431 -34657881 - MTB_Mm LTR MaLR -7 400 1 1 1238 222 222 0 0 chr13 85627143 85627233 -34657079 + (TG)n Simple_repeat Simple_repeat 2 91 0 1 1238 3095 146 64 114 chr13 85627241 85627976 -34656336 - RMER6A LTR ERVK 0 756 59 1 1238 518 303 162 26 chr13 85628016 85628250 -34656062 - B4A SINE B4 -24 268 3 1 1238 446 293 35 30 chr13 85628682 85628879 -34655433 - B3A SINE B2 0 198 1 1 1238 35742 45 2 1 chr13 85629762 85635212 -34649100 - L1Md_F3 LINE L1 0 6584 1129 1 1238 497 218 35 7 chr13 85635212 85635355 -34648957 - L1Md_F3 LINE L1 -6160 564 418 1 1238 185 0 0 39 chr13 85635473 85635499 -34648813 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 1238 1882 114 0 54 chr13 85635539 85635836 -34648476 + Lx LINE L1 6367 6647 -7 1 1238 8097 127 28 7 chr13 85635847 85637337 -34646975 - Lx3B LINE L1 0 6973 5455 1 1238 1187 171 18 22 chr13 85640422 85640649 -34643663 + URR1A DNA MER1_type 1 226 0 1 1238 1983 234 15 97 chr13 85640703 85641365 -34642947 - RMER19C LTR ERVK 0 611 4 1 1238 33 0 0 0 chr13 85641894 85641927 -34642385 + AT_rich Low_complexity Low_complexity 1 33 0 1 1238 3693 94 49 6 chr13 85642008 85642556 -34641756 - L1_Mus4 LINE L1 -17 6619 6048 1 1238 5475 91 27 29 chr13 85642991 85643882 -34640430 - RMER17D LTR ERVK 0 889 1 1 1238 201 139 47 0 chr13 85644047 85644090 -34640222 + (TATAA)n Simple_repeat Simple_repeat 5 49 0 1 1238 236 30 30 0 chr13 85645551 85645584 -34638728 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1238 255 353 73 0 chr13 85645901 85646051 -34638261 - MIR SINE MIR -8 254 94 1 1238 21 0 0 0 chr13 85646908 85646929 -34637383 + AT_rich Low_complexity Low_complexity 1 21 0 1 1238 188 0 74 0 chr13 85648926 85648953 -34635359 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1238 339 164 0 0 chr13 85649784 85649845 -34634467 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 1 1238 460 242 139 87 chr13 85649848 85650020 -34634292 - B3A SINE B2 -16 182 2 1 1238 393 102 0 0 chr13 85650077 85650136 -34634176 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1238 261 275 12 0 chr13 85650867 85650947 -34633365 + (TA)n Simple_repeat Simple_repeat 1 81 0 1 1238 1940 156 49 67 chr13 85650970 85651025 -34633287 - ORR1C2 LTR MaLR 0 384 343 1 1238 1216 54 0 0 chr13 85651025 85651172 -34633140 - B1_Mm SINE Alu 0 147 1 1 1238 1940 156 49 67 chr13 85651172 85651507 -34632805 - ORR1C2 LTR MaLR -42 342 1 1 1238 553 296 7 84 chr13 85651745 85651900 -34632412 - RSINE1 SINE B4 -1 164 22 1 1238 22 0 0 0 chr13 85653012 85653034 -34631278 + AT_rich Low_complexity Low_complexity 1 22 0 1 1238 425 329 21 21 chr13 85653039 85653182 -34631130 + RSINE1 SINE B4 1 143 -22 1 1238 24 67 0 0 chr13 85653195 85653240 -34631072 + AT_rich Low_complexity Low_complexity 1 45 0 1 1238 276 30 0 0 chr13 85653240 85653273 -34631039 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 1 1238 492 140 0 0 chr13 85653276 85653369 -34630943 + (TG)n Simple_repeat Simple_repeat 2 94 0 1 1238 536 363 62 18 chr13 85654667 85654942 -34629370 + B4 SINE B4 1 287 -5 1 1238 222 286 0 18 chr13 85654949 85655006 -34629306 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1238 282 316 40 17 chr13 85655109 85655283 -34629029 + L1MA9 LINE L1 6105 6282 -30 1 1238 369 275 200 16 chr13 85655335 85655520 -34628792 - L1MC LINE L1 -2058 5824 5606 1 1238 252 0 0 0 chr13 85655758 85655786 -34628526 + (TA)n Simple_repeat Simple_repeat 1 28 0 1 1238 1313 96 0 6 chr13 85656225 85656404 -34627908 + RMER17D2 LTR ERVK 1 178 -631 2 1238 4195 77 0 2 chr13 85656404 85657004 -34627308 - L1_Mm LINE L1 -1431 4452 3854 2 1238 190 0 67 0 chr13 85657357 85657387 -34626925 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 2 1238 531 0 0 0 chr13 85657387 85657445 -34626867 + (TTCTC)n Simple_repeat Simple_repeat 1 59 0 2 1238 3289 134 55 5 chr13 85657781 85658387 -34625925 - RMER17D2 LTR ERVK 0 809 174 2 1238 729 197 285 0 chr13 85658387 85658615 -34625697 - Lx7 LINE L1 -916 6780 6488 2 1238 1140 205 254 5 chr13 85658849 85658951 -34625361 - Lx9 LINE L1 -22 7622 7478 2 1238 414 0 0 0 chr13 85658951 85658997 -34625315 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1238 1140 205 254 5 chr13 85658997 85659311 -34625001 - Lx9 LINE L1 -167 7477 7103 2 1238 21 57 0 0 chr13 85659793 85659828 -34624484 + AT_rich Low_complexity Low_complexity 1 35 0 2 1238 216 163 0 0 chr13 85659856 85659899 -34624413 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1238 709 250 61 125 chr13 85659902 85660213 -34624099 - B4 SINE B4 0 292 2 2 1238 333 300 55 71 chr13 85662072 85662398 -34621914 - MYSERV6-int LTR ERVK -3124 5835 5515 2 1238 552 196 35 47 chr13 85663183 85663354 -34620958 + RNLTR23 LTR ERVK 474 642 0 2 1238 411 21 0 0 chr13 85666272 85666320 -34617992 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1238 27 62 0 0 chr13 85667102 85667150 -34617162 + AT_rich Low_complexity Low_complexity 1 48 0 2 1238 2539 85 91 16 chr13 85667899 85668271 -34616041 - MTB LTR MaLR 0 400 1 2 1238 414 0 0 0 chr13 85668374 85668420 -34615892 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1238 229 253 0 71 chr13 85668426 85668511 -34615801 - Lx7 LINE L1 -1518 6178 6100 2 1238 1069 261 3 35 chr13 85668532 85668818 -34615494 - Lx6 LINE L1 -16 7444 7168 2 1238 1034 288 87 11 chr13 85668855 85669210 -34615102 + Lx8 LINE L1 7088 7469 -4 2 1238 189 0 0 0 chr13 85669300 85669321 -34614991 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 2 1238 574 235 0 0 chr13 85669372 85669487 -34614825 - PB1D10 SINE Alu 0 117 3 2 1238 2986 73 22 7 chr13 85670110 85670525 -34613787 + BGLII LTR ERVK 1 421 0 2 1238 241 362 60 42 chr13 85671208 85671375 -34612937 - MIRb SINE MIR -60 208 39 2 1238 380 275 70 54 chr13 85671464 85671601 -34612711 - L1MA4 LINE L1 -274 6023 5876 2 1238 1720 196 5 108 chr13 85671601 85671791 -34612521 + ORR1C2 LTR MaLR 1 171 -213 2 1238 360 0 0 0 chr13 85671791 85671831 -34612481 + (CAAT)n Simple_repeat Simple_repeat 2 41 0 2 1238 1720 196 5 108 chr13 85671831 85672068 -34612244 + ORR1C2 LTR MaLR 172 384 0 2 1238 380 253 38 48 chr13 85672068 85672192 -34612120 - L1MA4 LINE L1 -422 5875 5754 2 1238 378 0 0 0 chr13 85672205 85672247 -34612065 + (TTTA)n Simple_repeat Simple_repeat 4 45 0 2 1238 442 361 11 27 chr13 85672252 85672437 -34611875 - B3A SINE B2 -16 182 1 2 1238 233 224 254 0 chr13 85672437 85672504 -34611808 - L1M3 LINE L1 -403 5768 5685 2 1238 13221 175 69 10 chr13 85672674 85674462 -34609850 + Lx2 LINE L1 3093 4874 -1012 2 1238 5577 58 55 3 chr13 85674462 85675195 -34609117 - L1Md_F2 LINE L1 -1 6581 5811 2 1238 13221 152 42 7 chr13 85675195 85676787 -34607525 + Lx2 LINE L1 4875 6643 -354 2 1238 1196 137 38 24 chr13 85676787 85676996 -34607316 + Lx2 LINE L1 6775 6986 -11 2 1238 35 63 0 0 chr13 85677124 85677187 -34607125 + AT_rich Low_complexity Low_complexity 1 63 0 2 1238 463 285 143 44 chr13 85677386 85678142 -34606170 + L1MA4 LINE L1 5107 5918 -373 2 1238 786 236 85 0 chr13 85678157 85678356 -34605956 - B3 SINE B2 0 216 1 2 1238 724 346 151 42 chr13 85678735 85679371 -34604941 - LTR41 LTR ERVL -28 740 36 2 1238 357 24 0 0 chr13 85679426 85679468 -34604844 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1238 294 29 0 0 chr13 85679472 85679507 -34604805 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1238 1676 26 0 0 chr13 85680017 85680212 -34604100 - Lx3_Mus LINE L1 -485 6524 6330 2 1238 2552 99 50 3 chr13 85680223 85680607 -34603705 + Lx3_Mus LINE L1 6608 7009 0 2 1238 24 53 0 0 chr13 85681753 85681791 -34602521 + AT_rich Low_complexity Low_complexity 1 38 0 2 1238 961 217 26 147 chr13 85681906 85682219 -34602093 - MTD LTR MaLR -8 411 137 2 1238 333 75 0 36 chr13 85682222 85682277 -34602035 - B1_Mus2 SINE Alu 0 147 95 2 1238 231 300 14 14 chr13 85682281 85682352 -34601960 - MTD LTR MaLR -265 154 84 2 1238 7158 176 30 6 chr13 85682363 85684046 -34600266 - Lx5 LINE L1 0 7050 5314 2 1238 5008 196 56 15 chr13 85684045 85685208 -34599104 + Lx4A LINE L1 5807 7058 0 2 1238 495 252 50 0 chr13 85685400 85685519 -34598793 - B1_Mur2 SINE Alu -6 143 19 2 1238 23 0 0 0 chr13 85685823 85685846 -34598466 + AT_rich Low_complexity Low_complexity 1 23 0 2 1238 21 36 0 0 chr13 85685880 85685908 -34598404 + AT_rich Low_complexity Low_complexity 1 28 0 2 1238 2949 180 12 45 chr13 85686036 85686595 -34597717 - RLTR20A LTR ERVK 0 541 1 2 1238 526 250 16 24 chr13 85686595 85686707 -34597605 + B1_Mur3 SINE Alu 38 148 -1 2 1238 2960 80 76 4 chr13 85686736 85687199 -34597113 - L1_Mur1 LINE L1 -3488 2398 1903 2 1238 5133 110 19 13 chr13 85687199 85688260 -34596052 + Lx3A LINE L1 5321 6386 -595 2 1238 5421 114 12 22 chr13 85688260 85689150 -34595162 + RLTR13D3 LTR ERVK 1 1114 0 2 1238 2932 95 14 36 chr13 85689150 85689596 -34594716 + Lx3A LINE L1 6381 6816 -165 2 1238 507 380 80 38 chr13 85690998 85691563 -34592749 + L1MEf LINE L1 892 1495 -4747 2 1238 2851 39 11 3 chr13 85691563 85691926 -34592386 + L1Md_F2 LINE L1 6217 6582 0 2 1238 507 380 80 38 chr13 85691926 85692073 -34592239 + L1MEf LINE L1 1496 1633 -4609 2 1238 195 100 0 0 chr13 85692130 85692160 -34592152 + (CAAAAA)n Simple_repeat Simple_repeat 5 34 0 2 1238 2031 267 112 21 chr13 85692392 85692434 -34591878 + L1M2 LINE L1 2587 2628 -3515 2 1238 456 67 0 0 chr13 85692434 85692494 -34591818 + (CAA)n Simple_repeat Simple_repeat 1 60 0 2 1238 2031 267 112 21 chr13 85692494 85693584 -34590728 + L1M2 LINE L1 2629 3821 -2322 2 1238 371 322 41 29 chr13 85693646 85693892 -34590420 + L1M2 LINE L1 5434 5682 -618 2 1238 343 247 155 25 chr13 85694262 85694533 -34589779 + L1MEf LINE L1 3086 3404 -2742 2 1238 239 321 36 0 chr13 85694834 85694946 -34589366 + L1MEf LINE L1 4238 4353 -1793 2 1238 2537 72 57 14 chr13 85695404 85695770 -34588542 - L1_Mus4 LINE L1 -6 6630 6249 2 1238 306 0 0 0 chr13 85695781 85695815 -34588497 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2 1238 384 254 85 0 chr13 85696815 85696933 -34587379 - B1F1 SINE Alu -7 142 15 2 1238 343 321 37 0 chr13 85696933 85696949 -34587363 - ID_B1 SINE B4 -7 217 79 2 1238 851 171 7 14 chr13 85698026 85698174 -34586138 + B1_Mus1 SINE Alu 2 148 0 2 1238 219 141 15 59 chr13 85698180 85698248 -34586064 + (CAAA)n Simple_repeat Simple_repeat 3 67 0 2 1238 315 122 0 0 chr13 85701443 85701492 -34582820 + (TCTCCC)n Simple_repeat Simple_repeat 6 54 0 2 1238 3905 52 6 22 chr13 85702638 85703148 -34581164 + L1_Mus1 LINE L1 6066 6567 0 2 1238 1062 208 215 46 chr13 85703358 85703838 -34580474 - RMER20B LTR ERVK -66 561 1 2 1238 1902 343 44 55 chr13 85704466 85706145 -34578167 - MuRRS4-int LTR ERV1 -1049 4014 2354 2 1238 340 283 40 48 chr13 85706883 85707009 -34577303 - MuRRS4-int LTR ERV1 -5490 2288 2164 2 1238 6458 169 18 84 chr13 85707692 85709086 -34575226 - ORR1A4-int LTR MaLR -478 1485 184 2 1238 516 328 58 46 chr13 85709989 85710315 -34573997 + RLTR6-int LTR ERV1 1348 1677 -6101 2 1238 258 228 29 19 chr13 85710438 85710541 -34573771 + A-rich Low_complexity Low_complexity 5 108 0 2 1238 723 291 64 53 chr13 85710689 85710954 -34573358 + RMER2 LTR ERV1 300 567 0 2 1238 1055 184 0 0 chr13 85710956 85711152 -34573160 - ORR1A4-int LTR MaLR -1766 197 2 2 1238 1701 127 69 57 chr13 85711157 85711474 -34572838 - ORR1A4 LTR MaLR -8 321 1 2 1238 459 0 0 0 chr13 85711743 85711794 -34572518 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1238 303 191 0 0 chr13 85712580 85712643 -34571669 + CT-rich Low_complexity Low_complexity 1 63 0 2 1238 241 254 164 27 chr13 85713286 85713359 -34570953 - Charlie12 DNA MER1_type -2779 94 12 2 1238 242 263 0 66 chr13 85714349 85714410 -34569902 - PB1D10 SINE Alu -14 103 47 2 1238 270 260 40 0 chr13 85714601 85714694 -34569618 + L1MA6 LINE L1 6193 6288 -3 2 1238 227 268 0 0 chr13 85714878 85714919 -34569393 + 5S rRNA rRNA 2 42 -79 2 1238 316 267 29 37 chr13 85715380 85715516 -34568796 + L1MA6 LINE L1 6104 6238 -62 2 1238 1272 249 49 60 chr13 85715877 85716245 -34568067 - MTE2b LTR MaLR 0 379 16 2 1238 4441 216 23 19 chr13 85716355 85717573 -34566739 + Lx6 LINE L1 5475 6698 -762 2 1238 1038 139 6 0 chr13 85717573 85717731 -34566581 - Lx3B LINE L1 -248 6725 6567 2 1238 1098 75 14 0 chr13 85718063 85718210 -34566102 + B1_Mur4 SINE Alu 2 150 0 2 1238 252 0 0 0 chr13 85718210 85718238 -34566074 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1238 733 300 76 44 chr13 85718240 85718515 -34565797 + B4 SINE B4 1 284 -8 2 1238 441 0 0 0 chr13 85718554 85718603 -34565709 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1238 261 241 52 0 chr13 85720779 85720837 -34563475 - PB1D9 SINE Alu -8 112 52 2 1239 186 171 0 0 chr13 85721159 85721200 -34563112 + GA-rich Low_complexity Low_complexity 2 42 0 2 1239 28 29 0 0 chr13 85722481 85722516 -34561796 + AT_rich Low_complexity Low_complexity 1 35 0 2 1239 10109 122 32 35 chr13 85722570 85723614 -34560698 + L1VL4 LINE L1 545 1593 -4293 2 1239 1187 145 5 0 chr13 85723614 85723800 -34560512 - MT2B LTR ERVL -49 552 366 2 1239 10109 122 32 35 chr13 85723800 85725418 -34558894 + L1VL4 LINE L1 1594 3222 -2664 2 1239 201 39 0 0 chr13 85725430 85725456 -34558856 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1239 557 211 214 93 chr13 85725676 85725839 -34558473 + B3 SINE B2 10 207 -9 2 1239 1233 231 30 108 chr13 85725971 85726369 -34557943 - Lx7 LINE L1 -712 6984 6618 2 1239 3828 187 77 38 chr13 85726369 85727046 -34557266 - L1_Mur3 LINE L1 -2544 3336 2628 2 1239 1570 49 24 10 chr13 85727046 85727254 -34557058 - L1_Mus1 LINE L1 0 6567 6357 2 1239 3828 187 77 38 chr13 85727254 85727512 -34556800 - L1_Mur3 LINE L1 -3253 2627 2357 2 1239 528 16 0 0 chr13 85727512 85727573 -34556739 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1239 3828 187 77 38 chr13 85727573 85727737 -34556575 - L1_Mur3 LINE L1 -3524 2356 2194 2 1239 396 0 0 0 chr13 85727864 85727908 -34556404 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 1239 20356 159 77 11 chr13 85727909 85733484 -34550828 - Lx4A LINE L1 -4 7054 1119 2 1239 191 32 65 0 chr13 85733484 85733515 -34550797 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 3 1239 1871 139 56 13 chr13 85733515 85733676 -34550636 - Lx4A LINE L1 -5539 1118 951 2 1239 3455 69 8 21 chr13 85733681 85734154 -34550158 - L1Md_F2 LINE L1 -2 6580 6114 3 1239 3920 63 2 2 chr13 85734154 85734688 -34549624 + L1Md_F2 LINE L1 5583 6088 -494 3 1239 630 256 37 52 chr13 85734685 85734957 -34549355 - L1VL4 LINE L1 -5701 601 334 3 1239 856 190 5 5 chr13 85734973 85735158 -34549154 - L1_Mur2 LINE L1 -579 5298 5114 3 1239 4529 102 8 6 chr13 85735144 85736106 -34548206 - L1_Mus2 LINE L1 -448 6118 5151 3 1239 328 154 0 0 chr13 85736105 85736157 -34548155 + L1_Mur2 LINE L1 5105 5156 -721 3 1239 21 0 0 0 chr13 85736219 85736240 -34548072 + AT_rich Low_complexity Low_complexity 1 21 0 3 1239 1145 241 100 12 chr13 85736406 85736746 -34547566 + ORR1D1 LTR MaLR 1 370 -4 3 1239 281 254 0 0 chr13 85736852 85736907 -34547405 - MLT1G3 LTR MaLR -361 151 97 3 1239 322 349 47 0 chr13 85737100 85737206 -34547106 - MLT1G3 LTR MaLR -457 138 28 3 1239 290 385 27 47 chr13 85737437 85737587 -34546725 - MLT1G3-int LTR MaLR -166 1221 1075 3 1239 930 131 6 12 chr13 85737688 85737858 -34546454 + (TCC)n Simple_repeat Simple_repeat 2 170 0 3 1239 27 49 0 0 chr13 85738286 85738327 -34545985 + AT_rich Low_complexity Low_complexity 1 41 0 3 1239 2973 21 0 0 chr13 85738514 85738849 -34545463 + IAPLTR1a_Mm LTR ERVK 1 335 -2 3 1239 20477 39 40 14 chr13 85738849 85741524 -34542788 + IAPEz-int LTR ERVK 6 2751 -3730 3 1239 27728 14 2 0 chr13 85741516 85744748 -34539564 + IAPEz-int LTR ERVK 3244 6481 0 3 1239 2973 21 0 0 chr13 85744748 85745083 -34539229 + IAPLTR1a_Mm LTR ERVK 1 335 -2 3 1239 1235 244 35 39 chr13 85745084 85745749 -34538563 + L1_Mur3 LINE L1 867 1420 -4460 3 1239 225 192 40 27 chr13 85745749 85745824 -34538488 - L1_Mur2 LINE L1 -4416 1461 1386 3 1239 2100 178 56 41 chr13 85746093 85746707 -34537605 + RLTR31_Mm LTR ERVK 1 557 0 3 1239 8922 191 80 55 chr13 85746761 85749357 -34534955 + L1_Mur3 LINE L1 2126 4785 -1092 3 1239 526 193 121 12 chr13 85749362 85749535 -34534777 - MYSERV-int LTR ERVK -960 7999 7808 3 1239 481 269 104 95 chr13 85749503 85749860 -34534452 - MYSERV-int LTR ERVK -1127 5423 5064 3 1239 21 0 0 0 chr13 85749885 85749906 -34534406 + AT_rich Low_complexity Low_complexity 1 21 0 3 1239 1726 217 96 19 chr13 85749928 85750045 -34534267 + RLTR31A_Mm LTR ERVK 3 117 -467 3 1239 840 121 0 0 chr13 85750045 85750177 -34534135 + (GA)n Simple_repeat Simple_repeat 2 133 0 3 1239 1726 221 96 18 chr13 85750177 85750511 -34533801 + RLTR31A_Mm LTR ERVK 118 555 -2 3 1239 1977 271 70 48 chr13 85750511 85751767 -34532545 - MYSERV-int LTR ERVK -1938 4612 3775 3 1239 2335 144 5 9 chr13 85752232 85752653 -34531659 - ETnERV2-int LTR ERVK -538 5270 4852 3 1239 2963 57 0 0 chr13 85752730 85753098 -34531214 - L1_Mus1 LINE L1 0 6567 6200 3 1239 1577 203 32 49 chr13 85753133 85753538 -34530774 - ETnERV2-int LTR ERVK -1014 4794 4397 3 1239 4534 123 85 16 chr13 85753538 85754423 -34529889 - ETnERV2-int LTR ERVK -4034 3372 2497 3 1239 8311 125 59 23 chr13 85754449 85755434 -34528878 - ETnERV2-int LTR ERVK -5321 2085 1053 3 1239 963 0 0 0 chr13 85755434 85755541 -34528771 + (TTTCC)n Simple_repeat Simple_repeat 4 110 0 3 1239 8311 125 59 23 chr13 85755541 85756114 -34528198 - ETnERV2-int LTR ERVK -6354 1052 472 3 1239 2645 122 11 40 chr13 85756115 85756566 -34527746 - RLTR13C2 LTR ERVK -370 438 1 3 1239 344 282 16 16 chr13 85757295 85757421 -34526891 - MMERVK10C-int LTR ERVK -4374 3207 3082 3 1239 258 264 0 0 chr13 85757964 85758036 -34526276 - MMERVK10C-int LTR ERVK -4724 2195 2124 3 1239 1191 208 35 24 chr13 85759506 85759796 -34524516 - RLTR15 LTR ERVK -66 293 1 3 1239 1317 202 168 3 chr13 85759802 85760326 -34523986 + L1_Mur3 LINE L1 5119 5827 -53 3 1239 6162 165 4 2 chr13 85760428 85761535 -34522777 - Lx LINE L1 0 6654 5546 3 1239 17542 110 16 8 chr13 85761528 85765435 -34518877 - Lx3_Mus LINE L1 -8 7001 3056 3 1239 337 40 20 0 chr13 85765482 85765532 -34518780 - MusHAL1 LINE L1 -2723 631 581 3 1239 2172 90 25 14 chr13 85765528 85765889 -34518423 - Lx3_Mus LINE L1 -3523 2363 1999 3 1239 2704 168 55 3 chr13 85765876 85766550 -34517762 - Lx3_Mus LINE L1 -5343 1314 213 3 1239 6155 120 10 2 chr13 85766550 85767589 -34516723 - L1VL4 LINE L1 -2514 1045 1 3 1239 194 382 24 16 chr13 85768027 85768152 -34516160 - L2a LINE L2 -36 3390 3265 3 1239 1626 124 32 0 chr13 85768159 85768441 -34515871 - L1VL4 LINE L1 -5439 863 573 3 1239 2332 162 23 0 chr13 85768446 85768840 -34515472 + Lx2B LINE L1 6596 6998 -2 3 1239 379 0 39 0 chr13 85770254 85770305 -34514007 + (TTTTTG)n Simple_repeat Simple_repeat 1 53 0 3 1239 1134 62 14 0 chr13 85770305 85770450 -34513862 - B1_Mus1 SINE Alu 0 148 2 3 1239 209 176 0 51 chr13 85770949 85771027 -34513285 + (TTA)n Simple_repeat Simple_repeat 1 74 0 3 1239 696 213 22 0 chr13 85771045 85771181 -34513131 - B1_Mur2 SINE Alu -8 141 3 3 1239 17119 186 75 35 chr13 85772243 85774853 -34509459 - Lx5 LINE L1 -799 6251 3491 3 1239 198 0 0 0 chr13 85774853 85774875 -34509437 + (TTG)n Simple_repeat Simple_repeat 3 24 0 3 1239 17119 184 68 38 chr13 85774875 85776074 -34508238 - Lx5 LINE L1 -2387 3490 2260 3 1239 540 0 0 0 chr13 85776074 85776134 -34508178 + (GA)n Simple_repeat Simple_repeat 2 61 0 3 1239 17119 197 58 36 chr13 85776134 85777473 -34506839 - Lx5 LINE L1 -3618 2259 907 3 1239 1029 123 154 0 chr13 85777909 85778104 -34506208 - Lx LINE L1 -1 6653 6429 3 1239 4400 104 11 20 chr13 85778098 85778757 -34505555 + Lx LINE L1 5759 6411 -243 3 1239 3487 87 49 8 chr13 85778792 85779301 -34505011 + L1_Mus2 LINE L1 6033 6562 -4 3 1239 27 0 0 0 chr13 85779920 85779947 -34504365 + AT_rich Low_complexity Low_complexity 1 27 0 3 1239 530 286 110 0 chr13 85780701 85780883 -34503429 - MTE2b LTR MaLR 0 379 178 3 1239 21 57 0 0 chr13 85780922 85780957 -34503355 + AT_rich Low_complexity Low_complexity 1 35 0 3 1239 23 0 0 0 chr13 85780992 85781015 -34503297 + AT_rich Low_complexity Low_complexity 1 23 0 3 1239 651 257 5 64 chr13 85781116 85781303 -34503009 - MTE2b LTR MaLR -201 178 3 3 1239 454 350 14 14 chr13 85781414 85781559 -34502753 + RSINE1 SINE B4 19 163 -2 3 1239 180 0 0 0 chr13 85781560 85781580 -34502732 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1239 28 29 0 0 chr13 85782431 85782466 -34501846 + AT_rich Low_complexity Low_complexity 1 35 0 3 1239 869 268 55 13 chr13 85783446 85783812 -34500500 - L1MA10 LINE L1 -41 6271 5912 3 1239 4204 188 74 12 chr13 85784401 85785209 -34499103 + RMER13A LTR ERVK 1 858 -2 3 1239 228 0 55 55 chr13 85785488 85785543 -34498769 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 3 1239 52 41 0 0 chr13 85786338 85786411 -34497901 + AT_rich Low_complexity Low_complexity 1 73 0 3 1239 301 372 0 0 chr13 85786411 85786497 -34497815 + MTD LTR MaLR 41 126 -293 3 1239 253 219 47 0 chr13 85786509 85786573 -34497739 - Lx7 LINE L1 -20 7676 7610 3 1239 1062 62 11 43 chr13 85786580 85786765 -34497547 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 3 1239 864 135 6 17 chr13 85786765 85786938 -34497374 + CT-rich Low_complexity Low_complexity 2 172 0 3 1239 209 239 28 14 chr13 85786970 85787042 -34497270 + A-rich Low_complexity Low_complexity 2 74 0 3 1239 750 224 91 28 chr13 85787065 85787318 -34496994 - Lx9 LINE L1 -75 7569 7301 3 1239 327 261 23 0 chr13 85787296 85787384 -34496928 - Lx9 LINE L1 -1214 6430 6341 3 1239 198 26 50 25 chr13 85787425 85787465 -34496847 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 3 1239 1327 257 39 92 chr13 85787561 85787842 -34496470 - Lx9 LINE L1 -1517 6127 5876 3 1239 2067 229 64 10 chr13 85787842 85788324 -34495988 - RLTR18B LTR ERVK -4 508 1 3 1239 1544 184 27 9 chr13 85788324 85788631 -34495681 - Lx9 LINE L1 -1769 5875 5532 3 1239 487 245 19 50 chr13 85788951 85789110 -34495202 - Lx9 LINE L1 -303 5544 5391 3 1239 2751 240 59 11 chr13 85789080 85789861 -34494451 - Lx9 LINE L1 -3527 2320 1503 3 1239 1261 242 25 9 chr13 85789864 85790189 -34494123 + RLTR16 LTR ERVK 4 333 -172 3 1239 28961 120 31 17 chr13 85790190 85796474 -34487838 + L1_Mus1 LINE L1 192 6567 0 3 1239 481 287 23 23 chr13 85796474 85796645 -34487667 + RLTR16 LTR ERVK 323 493 -12 3 1239 256 293 13 39 chr13 85796697 85796775 -34487537 + RLTR16 LTR ERVK 430 505 0 3 1239 3517 222 31 23 chr13 85796779 85797830 -34486482 - Lx9 LINE L1 -4343 1504 443 3 1239 4366 65 2 7 chr13 85798445 85799014 -34485298 + L1Md_F2 LINE L1 6004 6569 -13 3 1239 24 53 0 0 chr13 85799217 85799255 -34485057 + AT_rich Low_complexity Low_complexity 1 38 0 3 1239 496 267 11 33 chr13 85802016 85802152 -34482160 + B1_Mur2 SINE Alu 9 144 -5 3 1239 356 352 73 70 chr13 85802151 85802453 -34481859 + ORR1E LTR MaLR 19 321 -38 3 1239 222 62 0 0 chr13 85802736 85802768 -34481544 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 1239 841 54 0 0 chr13 85802769 85802880 -34481432 - B1_Mus2 SINE Alu -6 141 31 3 1239 337 202 16 102 chr13 85802784 85802911 -34481401 - RLTR25B LTR ERVK -506 522 407 3 1239 1140 275 82 25 chr13 85803078 85803432 -34480880 + MTE2a LTR MaLR 1 374 -5 3 1239 502 309 6 22 chr13 85803480 85803662 -34480650 + (CATA)n Simple_repeat Simple_repeat 2 180 0 3 1239 1501 33 0 0 chr13 85805046 85805228 -34479084 - L1Md_A LINE L1 -2 6580 6399 3 1239 280 356 51 22 chr13 85805377 85805555 -34478757 + MLT2D LTR ERVL 1 183 -231 3 1239 316 335 72 54 chr13 85805580 85805747 -34478565 + MLT1A-int LTR MaLR 1196 1365 -6 3 1239 399 344 122 6 chr13 85805799 85805980 -34478332 + MLT1A LTR MaLR 86 287 -87 3 1239 362 243 121 102 chr13 85806011 85806217 -34478095 - RMER2 LTR ERV1 -28 539 330 3 1239 180 0 0 0 chr13 85806744 85806764 -34477548 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 3 1239 565 288 0 0 chr13 85806773 85806905 -34477407 + B1_Mur1 SINE Alu 1 132 -17 3 1239 369 62 0 0 chr13 85806908 85806956 -34477356 + (CAAG)n Simple_repeat Simple_repeat 4 51 0 3 1239 207 86 86 0 chr13 85807148 85807183 -34477129 + CT-rich Low_complexity Low_complexity 6 43 0 3 1239 1713 204 42 186 chr13 85807526 85808105 -34476207 + RMER19C LTR ERVK 1 495 -116 3 1239 8249 97 26 63 chr13 85808107 85809708 -34474604 + L1Md_F LINE L1 410 2032 -3851 3 1239 681 120 37 0 chr13 85809708 85809816 -34474496 + B1_Mm SINE Alu 27 138 -9 3 1239 8249 97 26 63 chr13 85809816 85810255 -34474057 + L1Md_F LINE L1 2033 2479 -3404 3 1239 6885 91 15 1 chr13 85810249 85811239 -34473073 + L1Md_F LINE L1 3707 4710 -1173 3 1239 251 297 109 61 chr13 85811242 85811389 -34472923 + MLT1A1 LTR MaLR 216 369 -39 3 1239 1008 175 47 0 chr13 85811543 85811754 -34472558 + Lx2 LINE L1 6775 6995 -2 3 1239 38423 7 1 0 chr13 85811835 85817390 -34466922 + L1Md_A LINE L1 26 5586 -297 3 1239 8970 5 0 0 chr13 85817390 85818386 -34465926 + L1Md_A LINE L1 5587 6582 0 3 1239 914 111 0 0 chr13 85818397 85818523 -34465789 + B1_Mm SINE Alu 1 126 -21 3 1239 46 33 0 0 chr13 85818582 85818642 -34465670 + AT_rich Low_complexity Low_complexity 1 60 0 3 1239 894 278 119 49 chr13 85818964 85819309 -34465003 - MTEa LTR MaLR -6 373 5 3 1239 21 89 0 0 chr13 85820084 85820140 -34464172 + AT_rich Low_complexity Low_complexity 1 56 0 3 1239 801 31 0 0 chr13 85820319 85820415 -34463897 + (TC)n Simple_repeat Simple_repeat 2 97 0 3 1239 285 301 12 24 chr13 85820520 85820605 -34463707 - PB1D10 SINE Alu 0 117 34 3 1239 210 265 20 20 chr13 85820802 85820902 -34463410 + (TTTG)n Simple_repeat Simple_repeat 1 100 0 3 1239 238 270 96 0 chr13 85820906 85821021 -34463291 + Lx7 LINE L1 7604 7696 0 3 1239 607 229 0 0 chr13 85821233 85821351 -34462961 + PB1D9 SINE Alu 2 119 -1 3 1239 652 335 5 23 chr13 85821805 85822013 -34462299 + B3A SINE B2 1 194 -1 3 1239 570 235 0 0 chr13 85822114 85822216 -34462096 + B1_Mur4 SINE Alu 43 144 -6 3 1239 290 347 146 27 chr13 85822979 85823234 -34461078 + MER31B LTR ERV1 105 399 -86 3 1239 6629 94 86 7 chr13 85824132 85825143 -34459169 + L1_Mus3 LINE L1 5579 6637 -1 3 1239 21 0 0 0 chr13 85825178 85825199 -34459113 + AT_rich Low_complexity Low_complexity 1 21 0 4 1239 266 237 0 10 chr13 85825767 85825865 -34458447 + (TG)n Simple_repeat Simple_repeat 2 98 0 4 1239 569 305 7 0 chr13 85827875 85828016 -34456296 + B3 SINE B2 1 142 -74 4 1239 231 345 52 6 chr13 85828435 85828573 -34455739 + L2c LINE L2 3230 3375 0 4 1239 23 33 0 0 chr13 85828685 85828715 -34455597 + AT_rich Low_complexity Low_complexity 1 30 0 4 1239 23 54 0 0 chr13 85828802 85828839 -34455473 + AT_rich Low_complexity Low_complexity 1 37 0 4 1239 251 318 24 0 chr13 85829006 85829091 -34455221 - MIRc SINE MIR -113 155 69 4 1239 206 55 89 18 chr13 85829464 85829520 -34454792 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 4 1239 21 107 0 0 chr13 85829548 85829632 -34454680 + AT_rich Low_complexity Low_complexity 1 84 0 4 1239 303 187 133 0 chr13 85829646 85829721 -34454591 - L1M2 LINE L1 -3309 2834 2750 4 1239 23 101 0 0 chr13 85829828 85829907 -34454405 + AT_rich Low_complexity Low_complexity 1 79 0 4 1239 22 35 0 0 chr13 85830678 85830707 -34453605 + AT_rich Low_complexity Low_complexity 1 29 0 4 1239 274 263 14 50 chr13 85830772 85830912 -34453400 + Lx9 LINE L1 7510 7644 0 4 1239 21 0 0 0 chr13 85831123 85831144 -34453168 + AT_rich Low_complexity Low_complexity 1 21 0 4 1239 21 36 0 0 chr13 85831368 85831396 -34452916 + AT_rich Low_complexity Low_complexity 1 28 0 4 1239 558 335 7 0 chr13 85832450 85832602 -34451710 + B4 SINE B4 11 163 -129 4 1239 5176 95 22 3 chr13 85832692 85833433 -34450879 - L1_Mus3 LINE L1 -6 6632 5878 4 1239 219 114 0 0 chr13 85833848 85833883 -34450429 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 1239 2170 164 72 33 chr13 85834097 85834370 -34449942 + RLTR19-int LTR ERVK 788 1073 -5064 4 1239 4232 56 0 7 chr13 85834370 85834908 -34449404 + L1Md_F2 LINE L1 6049 6582 0 4 1239 2170 164 72 33 chr13 85834908 85835121 -34449191 + RLTR19-int LTR ERVK 1074 1293 -4844 4 1239 23 78 0 0 chr13 85835567 85835618 -34448694 + AT_rich Low_complexity Low_complexity 1 51 0 4 1239 2765 171 55 31 chr13 85835865 85836449 -34447863 + RMER16-int LTR ERVK 3674 4271 -1135 4 1239 25952 108 23 29 chr13 85836449 85838759 -34445553 + L1Md_F LINE L1 98 2331 -3552 4 1239 592 247 108 25 chr13 85838759 85838902 -34445410 - MTD LTR MaLR -53 366 207 4 1239 848 19 19 0 chr13 85838902 85839007 -34445305 + (TTTC)n Simple_repeat Simple_repeat 3 109 0 4 1239 592 248 109 34 chr13 85839007 85839023 -34445289 - MTD LTR MaLR -215 206 196 4 1239 1651 20 5 0 chr13 85839023 85839223 -34445089 - L1Md_F2 LINE L1 -12 6570 6370 4 1239 535 253 117 96 chr13 85839223 85839259 -34445053 - MTD LTR MaLR -222 199 169 4 1239 25952 104 13 75 chr13 85839259 85841885 -34442427 + L1_Mm LINE L1 2326 4963 -914 4 1239 3255 30 17 0 chr13 85841885 85842288 -34442024 + MT2_Mm LTR ERVL 1 410 -83 4 1239 438 0 0 0 chr13 85842285 85842335 -34441977 + MTB LTR MaLR 351 400 0 4 1239 25952 104 13 75 chr13 85842335 85842949 -34441363 + L1_Mm LINE L1 4964 5581 -296 4 1239 7246 66 28 2 chr13 85842949 85843907 -34440405 + L1Md_F2 LINE L1 5588 6570 -12 4 1239 273 100 0 0 chr13 85843921 85843961 -34440351 + RMER16-int LTR ERVK 4262 4301 -1105 4 1239 6749 147 10 17 chr13 85843962 85845094 -34439218 + RMER16-int LTR ERVK 4279 5402 -4 4 1239 587 225 97 18 chr13 85845097 85845406 -34438906 + RMER16 LTR ERVK 198 533 0 4 1239 25 31 0 0 chr13 85845534 85845566 -34438746 + AT_rich Low_complexity Low_complexity 1 32 0 4 1239 1298 160 9 4 chr13 85846076 85846302 -34438010 + Lx LINE L1 6425 6651 -3 4 1239 1121 181 87 12 chr13 85846355 85846596 -34437716 - RLTR22_Mur LTR ERVK 0 1848 1590 4 1239 4535 163 83 30 chr13 85846702 85847671 -34436641 - RLTR22_Mur LTR ERVK -828 1020 1 4 1239 189 0 0 0 chr13 85847799 85847820 -34436492 + (TA)n Simple_repeat Simple_repeat 1 21 0 4 1239 238 276 26 0 chr13 85847967 85848043 -34436269 - L1MC LINE L1 -2297 5745 5668 4 1239 767 115 0 0 chr13 85848572 85848694 -34435618 - L1_Mus2 LINE L1 0 6566 6445 4 154 23939 145 66 7 chr13 85848697 85853635 -34430677 - L1Md_F LINE L1 -305 5578 352 4 1240 573 232 120 109 chr13 85853648 85853924 -34430388 - L1VL1 LINE L1 -5919 503 225 4 1240 216 348 0 70 chr13 85853925 85853996 -34430316 - ID4_ SINE ID -9 74 9 4 1240 363 192 0 0 chr13 85854920 85854993 -34429319 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 1240 16722 182 20 31 chr13 85856618 85861082 -34423230 - Lx2 LINE L1 -2 6995 2584 4 1240 1637 177 22 22 chr13 85861102 85861471 -34422841 - RLTR31_Mm LTR ERVK -192 369 1 4 1240 6452 195 53 78 chr13 85861473 85861978 -34422334 - RMER3D-int LTR ERVK -2 2840 2362 4 1240 1116 63 7 0 chr13 85861978 85862120 -34422192 + B1_Mm SINE Alu 5 147 0 4 1240 6452 199 62 78 chr13 85862120 85863971 -34420341 - RMER3D-int LTR ERVK -481 2361 1 4 1240 1396 249 48 62 chr13 85863971 85864475 -34419837 - RLTR31_Mm LTR ERVK 0 561 65 4 1240 4376 111 11 10 chr13 85864475 85865196 -34419116 - MusHAL1 LINE L1 -1382 1330 609 4 1240 3189 194 67 8 chr13 85865477 85866130 -34418182 + RLTR17 LTR ERVK 1 692 0 4 1240 40315 17 1 7 chr13 85866248 85872575 -34411737 - L1Md_A LINE L1 -2 6580 292 4 1240 285 341 171 14 chr13 85872620 85872760 -34411552 - RSINE1 SINE B4 0 165 4 4 1240 267 103 0 0 chr13 85874452 85874491 -34409821 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1240 740 331 72 16 chr13 85874956 85875263 -34409049 - MLT1A0 LTR MaLR -32 333 10 4 1240 482 314 37 49 chr13 85875675 85875839 -34408473 + RSINE1 SINE B4 2 163 -2 4 1240 1857 250 99 65 chr13 85875862 85876278 -34408034 + Lx7 LINE L1 272 759 -6969 4 1240 2019 87 11 0 chr13 85876278 85876564 -34407748 - L1_Mus3 LINE L1 0 6638 6350 4 1240 1857 248 70 77 chr13 85876564 85876927 -34407385 + Lx7 LINE L1 760 1158 -6570 4 1240 321 123 236 36 chr13 85877117 85877227 -34407085 + MusHAL1 LINE L1 1600 1731 -981 4 1240 966 190 101 1 chr13 85877210 85877441 -34406871 + Lx7 LINE L1 5621 5870 -10 4 1240 2963 239 38 73 chr13 85877442 85878358 -34405954 + Lx7 LINE L1 6806 7689 -7 4 1240 267 375 0 0 chr13 85879718 85879790 -34404522 + PB1D10 SINE Alu 15 86 -31 4 1240 1144 67 0 32 chr13 85880476 85880661 -34403651 + (GGAAA)n Simple_repeat Simple_repeat 2 180 0 4 1240 204 206 14 56 chr13 85880661 85880723 -34403589 + A-rich Low_complexity Low_complexity 11 70 0 4 1240 785 294 57 83 chr13 85882509 85882858 -34401454 + MLT2D LTR ERVL 3 342 -72 4 1240 1236 176 30 53 chr13 85883366 85883698 -34400614 - RLTR13D6 LTR ERVK 0 1114 619 4 1240 750 32 0 11 chr13 85883692 85883786 -34400526 - MTA_Mm LTR MaLR -303 93 1 4 1240 895 157 0 0 chr13 85883786 85883925 -34400387 - RLTR13D6 LTR ERVK -763 139 1 4 1240 2225 214 102 24 chr13 85883909 85884165 -34400147 - RMER20B LTR ERVK 0 627 342 4 1240 342 0 0 0 chr13 85884165 85884203 -34400109 + (TA)n Simple_repeat Simple_repeat 1 38 0 4 1240 2225 214 102 24 chr13 85884203 85884457 -34399855 - RMER20B LTR ERVK -286 341 78 4 1240 1187 130 23 9 chr13 85884457 85884674 -34399638 + Lx3A LINE L1 6761 6980 -1 4 1240 289 117 0 32 chr13 85884674 85884736 -34399576 + (TAAA)n Simple_repeat Simple_repeat 1 60 0 4 1240 415 164 96 0 chr13 85884737 85884810 -34399502 - RMER20B LTR ERVK -538 89 10 4 1240 2593 105 50 5 chr13 85884918 85885321 -34398991 - BGLII LTR ERVK 0 421 1 4 1240 3296 190 118 8 chr13 85885321 85886248 -34398064 - MYSERV16_I-int LTR ERVK -1 2325 1297 4 1240 431 289 95 12 chr13 85886255 85886423 -34397889 - MTD LTR MaLR -53 366 185 4 1240 460 227 0 22 chr13 85886424 85886514 -34397798 - Lx6 LINE L1 -108 7352 7265 4 1240 7088 75 8 9 chr13 85886525 85887472 -34396840 - L1Md_F2 LINE L1 -3 6579 5634 4 1240 1860 172 126 59 chr13 85887476 85887996 -34396316 - RMER3D-int LTR ERVK -1270 1572 1017 4 1240 295 148 0 0 chr13 85888126 85888180 -34396132 - RMER3D-int LTR ERVK -2365 477 424 4 1240 191 341 68 75 chr13 85888427 85888573 -34395739 - MIRb SINE MIR 0 268 124 4 1240 464 333 11 48 chr13 85888699 85888888 -34395424 - B3A SINE B2 -16 182 1 4 1240 185 154 0 25 chr13 85889064 85889104 -34395208 + CT-rich Low_complexity Low_complexity 3 41 0 4 1240 36 62 0 0 chr13 85890935 85890999 -34393313 + AT_rich Low_complexity Low_complexity 1 64 0 4 1240 296 108 164 30 chr13 85891448 85891515 -34392797 - Lx9 LINE L1 -688 6956 6881 4 1240 389 179 137 0 chr13 85891511 85891606 -34392706 + Lx9 LINE L1 6970 7077 -567 4 1240 1583 256 42 24 chr13 85891618 85892118 -34392194 + Lx9 LINE L1 7134 7642 -2 4 1240 438 299 8 0 chr13 85892127 85892261 -34392051 + Lx9 LINE L1 7339 7473 -171 4 1240 315 161 0 0 chr13 85892405 85892461 -34391851 + T-rich Low_complexity Low_complexity 1 56 0 4 1240 1061 86 0 0 chr13 85892461 85892600 -34391712 - B1_Mus2 SINE Alu 0 147 9 4 1240 424 254 47 95 chr13 85892467 85892615 -34391697 - B4A SINE B4 -71 221 81 4 1240 211 71 48 0 chr13 85893220 85893262 -34391050 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 4 1240 442 49 49 0 chr13 85893262 85893323 -34390989 - B1_Mur4 SINE Alu -1 149 86 4 1240 506 128 11 0 chr13 85893335 85893429 -34390883 + (TA)n Simple_repeat Simple_repeat 1 95 0 4 1240 342 45 0 0 chr13 85893542 85893586 -34390726 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1240 317 338 30 89 chr13 85894526 85894763 -34389549 - L1M4 LINE L1 -5817 725 503 4 1240 2419 210 33 19 chr13 85894763 85894858 -34389454 - RLTR20D LTR ERVK 0 568 477 4 1240 534 16 0 0 chr13 85894858 85894921 -34389391 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1240 2419 210 33 19 chr13 85894921 85895345 -34388967 - RLTR20D LTR ERVK -92 476 44 4 1240 3567 97 2 2 chr13 85895345 85895871 -34388441 - MusHAL1 LINE L1 -1006 1706 1181 4 1240 8417 134 17 1 chr13 85895873 85897196 -34387116 + Lx2 LINE L1 5650 6993 -4 4 1240 180 0 0 0 chr13 85897196 85897216 -34387096 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 4 1240 327 81 226 0 chr13 85897223 85897285 -34387027 - RLTR20D LTR ERVK -492 76 1 4 1240 318 358 36 0 chr13 85897289 85897482 -34386830 - L1M4 LINE L1 -6038 504 305 4 1240 364 280 90 7 chr13 85897632 85897776 -34386536 - L1M4 LINE L1 -6383 159 4 4 1240 516 306 50 38 chr13 85898384 85898742 -34385570 + MLT1B LTR MaLR 1 365 0 4 1240 198 0 0 0 chr13 85900213 85900235 -34384077 + (TTG)n Simple_repeat Simple_repeat 2 23 0 4 1240 348 64 0 0 chr13 85902465 85902512 -34381800 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1240 21 36 0 0 chr13 85902802 85902830 -34381482 + AT_rich Low_complexity Low_complexity 1 28 0 4 1240 665 299 35 0 chr13 85903279 85903476 -34380836 - MTE2b LTR MaLR -143 236 33 4 1240 210 216 0 38 chr13 85903506 85903559 -34380753 + (TCTCTG)n Simple_repeat Simple_repeat 2 52 0 4 1240 758 253 199 40 chr13 85903762 85904083 -34380229 - ORR1D1 LTR MaLR -2 372 1 4 1240 1746 171 3 63 chr13 85904089 85904439 -34379873 + ORR1A4 LTR MaLR 1 329 0 4 1240 343 109 203 0 chr13 85904439 85904503 -34379809 - ORR1D1-int LTR MaLR -1 1369 1293 4 1240 6659 90 16 5 chr13 85904517 85906041 -34378271 + L1_Mus2 LINE L1 4967 6501 -65 4 1240 831 233 48 24 chr13 85906041 85906302 -34378010 - ORR1D1-int LTR MaLR -63 1307 1108 4 1240 4812 127 20 21 chr13 85906338 85907143 -34377169 + RMER17D2 LTR ERVK 6 809 0 4 1240 580 225 14 68 chr13 85907293 85907417 -34376895 - ORR1D1-int LTR MaLR -293 1077 962 4 1240 765 264 18 28 chr13 85907417 85907635 -34376677 - ORR1D1 LTR MaLR -1 373 158 4 1240 546 119 0 0 chr13 85907636 85907720 -34376592 + (GA)n Simple_repeat Simple_repeat 2 85 0 4 1240 755 206 11 40 chr13 85907720 85907897 -34376415 - ORR1D1 LTR MaLR -192 182 11 4 1240 246 267 103 19 chr13 85909640 85909747 -34374565 + L2c LINE L2 3252 3367 -20 5 1240 4104 145 85 86 chr13 85911029 85911936 -34372376 - RMER17A2 LTR ERVK 0 906 1 5 1240 259 209 55 0 chr13 85914630 85914721 -34369591 + (TA)n Simple_repeat Simple_repeat 1 96 0 5 1240 254 222 0 24 chr13 85915001 85915084 -34369228 - Lx9 LINE L1 -3 7641 7561 5 1240 4061 194 38 0 chr13 85915106 85915890 -34368422 - Lx9 LINE L1 -181 7463 6650 5 1240 210 193 0 50 chr13 85915895 85915910 -34368402 + A-rich Low_complexity Low_complexity 1 15 0 5 1240 1369 156 51 0 chr13 85915910 85916167 -34368145 + Lx3B LINE L1 6703 6972 -1 5 1240 210 193 0 50 chr13 85916167 85916211 -34368101 + A-rich Low_complexity Low_complexity 16 57 0 5 1240 22 0 0 0 chr13 85916486 85916508 -34367804 + AT_rich Low_complexity Low_complexity 1 22 0 5 1240 355 281 0 22 chr13 85916670 85916761 -34367551 + B4A SINE B4 5 93 -199 5 1240 1073 91 0 0 chr13 85917016 85917159 -34367153 + B1_Mus1 SINE Alu 2 144 -4 5 1240 837 321 35 32 chr13 85917238 85917521 -34366791 - B4A SINE B4 -6 286 3 5 1240 387 251 115 38 chr13 85918317 85918483 -34365829 - MTD LTR MaLR 0 419 216 5 1240 5184 191 34 24 chr13 85918561 85918895 -34365417 - Lx2B LINE L1 -5 6995 6660 5 1240 1053 96 0 33 chr13 85918895 85919031 -34365281 + B1_Mus2 SINE Alu 1 136 -11 5 1240 369 43 0 0 chr13 85919031 85919078 -34365234 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 5 1240 1053 96 0 33 chr13 85919078 85919092 -34365220 + B1_Mus2 SINE Alu 137 146 -1 5 1240 5184 191 34 24 chr13 85919092 85919412 -34364900 - Lx2B LINE L1 -341 6659 6325 5 1240 312 27 0 0 chr13 85919412 85919449 -34364863 + (TGGA)n Simple_repeat Simple_repeat 3 39 0 5 1240 5184 191 34 24 chr13 85919449 85919893 -34364419 - Lx2B LINE L1 -676 6324 5886 5 1240 413 344 61 6 chr13 85919900 85920064 -34364248 - MTD LTR MaLR -218 201 29 5 1240 309 26 0 0 chr13 85920210 85920248 -34364064 + (CA)n Simple_repeat Simple_repeat 1 38 0 5 1240 1032 32 0 0 chr13 85920248 85920371 -34363941 + (GA)n Simple_repeat Simple_repeat 2 125 0 5 1240 1617 49 0 0 chr13 85920480 85920683 -34363629 - L1_Mus1 LINE L1 -599 5968 5766 5 1240 4502 87 2 0 chr13 85920683 85921279 -34363033 + L1_Mus1 LINE L1 5970 6566 -1 5 1240 1024 82 0 52 chr13 85921316 85921470 -34362842 + B1_Mm SINE Alu 2 147 0 5 1240 376 27 40 40 chr13 85921471 85921547 -34362765 + (CAAAAA)n Simple_repeat Simple_repeat 3 78 0 5 1240 369 0 0 0 chr13 85923193 85923234 -34361078 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 1240 498 17 0 0 chr13 85923234 85923292 -34361020 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1240 777 333 45 15 chr13 85923300 85923568 -34360744 - B4A SINE B4 -7 285 10 5 1240 236 321 98 79 chr13 85923782 85923985 -34360327 + MLT1B LTR MaLR 24 230 -160 5 1240 680 282 13 65 chr13 85924685 85924916 -34359396 + ORR1E LTR MaLR 4 222 -137 5 1240 2570 262 57 5 chr13 85924924 85925572 -34358740 - Lx6 LINE L1 -20 7440 6759 5 1240 318 186 118 49 chr13 85925572 85925674 -34358638 + ORR1E LTR MaLR 260 368 -2 5 1240 610 244 22 7 chr13 85925928 85926064 -34358248 - B1_Mur3 SINE Alu -8 141 4 5 1240 15073 118 17 29 chr13 85926158 85929288 -34355024 + L1VL4 LINE L1 194 3277 -282 5 1240 4574 67 2 2 chr13 85929351 85929946 -34354366 + L1Md_F2 LINE L1 4992 5586 -297 5 1240 7049 90 16 3 chr13 85929946 85930929 -34353383 + L1Md_F2 LINE L1 5587 6582 0 5 1240 1034 143 9 47 chr13 85930930 85931143 -34353169 + Lx LINE L1 6443 6647 -7 5 1240 285 370 34 14 chr13 85931146 85931294 -34353018 - MIRb SINE MIR -66 202 52 5 1240 38 61 0 0 chr13 85932387 85932453 -34351859 + AT_rich Low_complexity Low_complexity 1 66 0 5 1240 24 32 0 0 chr13 85932732 85932763 -34351549 + AT_rich Low_complexity Low_complexity 1 31 0 5 1240 29 60 0 0 chr13 85932850 85932900 -34351412 + AT_rich Low_complexity Low_complexity 1 50 0 5 1240 8162 43 1 2 chr13 85932906 85933990 -34350322 - L1Md_F2 LINE L1 -1 6581 5499 5 1240 355 310 107 40 chr13 85934384 85934656 -34349656 + B4A SINE B4 1 290 -2 5 1240 340 314 202 9 chr13 85934814 85935042 -34349270 + MLT1C LTR MaLR 192 463 -4 5 1240 1138 189 155 14 chr13 85936996 85937351 -34346961 + L1_Mur3 LINE L1 2909 3313 -2567 5 1240 3059 165 46 12 chr13 85937325 85938017 -34346295 + L1_Mur3 LINE L1 3057 3772 -2108 5 1240 859 179 6 6 chr13 85938403 85938511 -34345801 + (CATATA)n Simple_repeat Simple_repeat 1 108 0 5 1240 1040 139 0 11 chr13 85938511 85938693 -34345619 + (TA)n Simple_repeat Simple_repeat 1 180 0 5 1240 859 179 6 6 chr13 85938693 85938764 -34345548 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 5 1240 2009 200 42 12 chr13 85939445 85939850 -34344462 - MTC LTR MaLR -4 417 1 5 1240 333 285 137 37 chr13 85940307 85940635 -34343677 + L1M5 LINE L1 4307 4667 -1479 5 1240 3315 134 10 3 chr13 85940642 85941256 -34343056 + L1_Mus4 LINE L1 5481 6095 -541 5 1240 26 30 0 0 chr13 85942222 85942255 -34342057 + AT_rich Low_complexity Low_complexity 1 33 0 5 1240 348 372 133 42 chr13 85942263 85942647 -34341665 - Lx8 LINE L1 -1 7472 7054 5 1240 302 322 71 28 chr13 85942707 85942889 -34341423 - L1MC LINE L1 -2066 5816 5627 5 1240 7778 121 24 8 chr13 85942944 85943686 -34340626 - MusHAL1 LINE L1 -3 2709 1949 5 1240 311 65 22 0 chr13 85943686 85943732 -34340580 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 5 1240 7778 121 24 8 chr13 85943732 85943878 -34340434 - MusHAL1 LINE L1 -764 1948 1802 5 1240 358 0 57 19 chr13 85943878 85943931 -34340381 + (TTTTG)n Simple_repeat Simple_repeat 2 56 0 5 1240 7778 121 24 8 chr13 85943931 85944350 -34339962 - MusHAL1 LINE L1 -911 1801 1381 5 1240 719 130 0 8 chr13 85944352 85944476 -34339836 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 5 1240 1059 195 36 46 chr13 85944484 85944764 -34339548 - RLTR31_Mm LTR ERVK -189 372 96 5 1240 207 0 0 0 chr13 85944865 85944888 -34339424 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1240 5067 87 15 27 chr13 85944959 85945702 -34338610 + L1_Mus2 LINE L1 5830 6563 -3 5 1240 5935 120 33 6 chr13 85945727 85946726 -34337586 - MusHAL1 LINE L1 -1316 1396 371 5 1240 4783 124 8 33 chr13 85946708 85947474 -34336838 - L1VL4 LINE L1 -5346 956 210 5 1240 257 131 82 0 chr13 85947757 85947818 -34336494 + Lx9 LINE L1 7578 7643 -1 5 1240 2644 259 117 21 chr13 85947889 85949288 -34335024 + Lx6 LINE L1 99 1648 -4232 5 1240 6193 104 38 15 chr13 85949284 85950210 -34334102 + Lx LINE L1 5693 6639 -15 5 1240 333 68 0 0 chr13 85950210 85950254 -34334058 + (TAA)n Simple_repeat Simple_repeat 2 45 0 5 1240 928 228 13 0 chr13 85950373 85950601 -34333711 + Lx6 LINE L1 1640 1870 -4010 5 1240 528 30 0 0 chr13 85950648 85950714 -34333598 + (CA)n Simple_repeat Simple_repeat 2 67 0 5 1240 1973 198 86 34 chr13 85950742 85951243 -34333069 + RLTR11A2 LTR ERVK 1 527 0 5 1240 2065 209 24 92 chr13 85951243 85951832 -34332480 + Lx6 LINE L1 2073 2621 -3259 5 1240 426 206 11 0 chr13 85951816 85951908 -34332404 + Lx6 LINE L1 3733 3825 -2055 5 1240 2344 202 55 20 chr13 85951979 85952485 -34331827 - RLTR12B LTR ERVK -4 524 1 5 1240 4988 196 82 25 chr13 85952849 85954110 -34330202 + Lx6 LINE L1 3823 5154 -726 5 1240 3109 221 27 9 chr13 85954123 85955242 -34329070 + Lx6 LINE L1 5288 6432 -1028 5 1240 1274 52 0 11 chr13 85955995 85956171 -34328141 + (TCTCCC)n Simple_repeat Simple_repeat 3 176 0 5 1240 7338 159 70 30 chr13 85956175 85956297 -34328015 - Lx4A LINE L1 -7 7051 6928 5 1240 333 0 0 0 chr13 85956297 85956334 -34327978 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1240 7338 159 70 29 chr13 85956334 85957662 -34326650 - Lx4A LINE L1 -131 6927 5538 5 1240 21 0 0 0 chr13 85959608 85959629 -34324683 + AT_rich Low_complexity Low_complexity 1 21 0 5 1240 560 330 9 13 chr13 85959726 85959978 -34324334 + Lx6 LINE L1 7182 7365 -95 5 1240 5422 110 1 0 chr13 85960341 85961121 -34323191 + L1_Mm LINE L1 4910 5690 -193 5 1240 471 266 101 0 chr13 85961428 85961586 -34322726 - L1MC1 LINE L1 -24 6309 6136 5 1240 7617 95 4 3 chr13 85961601 85962691 -34321621 - L1_Mus3 LINE L1 -5 6633 5533 5 1240 22 70 0 0 chr13 85962919 85962962 -34321350 + AT_rich Low_complexity Low_complexity 1 43 0 5 1240 21 57 0 0 chr13 85963466 85963501 -34320811 + AT_rich Low_complexity Low_complexity 1 35 0 5 1240 369 0 0 0 chr13 85963706 85963747 -34320565 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1240 182 292 123 0 chr13 85964681 85964746 -34319566 - L2b LINE L2 0 3375 3303 5 1240 1732 146 57 7 chr13 85965336 85965632 -34318680 - L1_Mur2 LINE L1 -93 5784 5474 5 1240 4393 216 63 18 chr13 85965631 85965724 -34318588 + Lx2B LINE L1 5862 5954 -1046 5 1240 288 0 0 0 chr13 85965724 85965756 -34318556 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 5 1240 4393 216 63 18 chr13 85965756 85966751 -34317561 + Lx2B LINE L1 5955 6998 -2 5 1240 213 65 0 0 chr13 85968368 85968399 -34315913 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1240 234 62 0 0 chr13 85969973 85970005 -34314307 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1240 638 137 7 0 chr13 85970740 85970886 -34313426 + (TAGA)n Simple_repeat Simple_repeat 4 150 0 5 1240 388 304 93 66 chr13 85971310 85971567 -34312745 + MER21B LTR ERV1 416 679 -184 5 1240 204 159 0 22 chr13 85972349 85972394 -34311918 + T-rich Low_complexity Low_complexity 3 46 0 5 1240 22 35 0 0 chr13 85972906 85972935 -34311377 + AT_rich Low_complexity Low_complexity 1 29 0 5 1240 310 243 57 19 chr13 85973066 85973171 -34311141 + MER5A1 DNA MER1_type 33 141 -25 5 1240 12566 115 18 68 chr13 85973602 85975492 -34308820 - Lx3A LINE L1 0 6981 5116 5 1240 3024 86 12 2 chr13 85975492 85975910 -34308402 - L1_Mus2 LINE L1 -1 6565 6144 5 1240 12566 95 13 149 chr13 85975910 85977612 -34306700 - Lx3A LINE L1 -771 5115 3716 5 1240 1515 20 0 61 chr13 85977612 85977849 -34306463 - L1Md_F2 LINE L1 0 6582 6382 5 1240 327 47 0 0 chr13 85977849 85977868 -34306444 + (T)n Simple_repeat Simple_repeat 1 19 0 5 19 39036 74 4 23 chr13 85977868 85985406 -34298906 - L1Md_T LINE L1 0 6582 99 5 1241 9432 90 15 16 chr13 85985406 85985639 -34298673 - L1_Mur1 LINE L1 -2158 3728 3483 5 1241 486 0 0 0 chr13 85985639 85985693 -34298619 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1241 9432 90 15 16 chr13 85985693 85986911 -34297401 - L1_Mur1 LINE L1 -2404 3482 2279 5 1241 257 246 33 25 chr13 85987457 85987578 -34296734 + L1M3f LINE L1 945 1066 -4262 5 1241 487 322 18 50 chr13 85987883 85988102 -34296210 + RMER20A LTR ERVK 1 212 -304 5 1241 1099 296 76 19 chr13 85989411 85989886 -34294426 + RMER5 LTR ERV1 33 534 0 5 1241 23 0 0 0 chr13 85990464 85990487 -34293825 + AT_rich Low_complexity Low_complexity 1 23 0 5 1241 193 289 18 0 chr13 85990525 85990588 -34293724 - MIRc SINE MIR -129 147 84 5 1241 243 0 0 0 chr13 85991091 85991118 -34293194 + (T)n Simple_repeat Simple_repeat 1 27 0 5 1241 255 323 105 5 chr13 85993778 85993968 -34290344 + L1MC4a LINE L1 5375 5583 -2299 5 1241 201 184 60 20 chr13 85994082 85994132 -34290180 + G-rich Low_complexity Low_complexity 5 56 0 5 1241 468 0 0 0 chr13 85994132 85994184 -34290128 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1241 317 281 87 55 chr13 85994190 85994465 -34289847 + L1MC4a LINE L1 5693 5976 -1906 5 1241 282 303 69 31 chr13 85994573 85994733 -34289579 + L1MC4a LINE L1 7408 7573 -309 5 1241 2473 221 211 30 chr13 85994902 85995208 -34289104 + Lx6 LINE L1 6564 6883 -577 6 1241 183 100 0 0 chr13 85995208 85995238 -34289074 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1241 2473 221 211 30 chr13 85995238 85995525 -34288787 + Lx6 LINE L1 6884 7267 -193 6 1241 414 0 0 0 chr13 85995525 85995571 -34288741 + (TATTG)n Simple_repeat Simple_repeat 2 47 0 6 1241 2473 221 211 30 chr13 85995571 85995736 -34288576 + Lx6 LINE L1 7268 7459 -1 6 1241 360 0 0 0 chr13 85996703 85996743 -34287569 + (TTA)n Simple_repeat Simple_repeat 3 42 0 6 1241 5247 105 44 9 chr13 85996745 85997540 -34286772 - Lx3B LINE L1 -4 6969 6147 6 1241 1395 82 16 0 chr13 85998355 85998538 -34285774 - B2_Mm2 SINE B2 -8 187 2 6 1241 186 43 0 0 chr13 85998932 85998955 -34285357 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1241 239 350 17 8 chr13 85999270 85999388 -34284924 + PB1D7 SINE Alu 1 119 -1 6 1241 255 231 25 13 chr13 85999586 85999665 -34284647 + (TA)n Simple_repeat Simple_repeat 1 80 0 6 1241 2555 201 121 22 chr13 86002083 86002804 -34281508 + ORR1B1-int LTR MaLR 1002 1772 -191 1 1241 1556 219 28 52 chr13 86002771 86003133 -34281179 + ORR1B1 LTR MaLR 42 394 0 1 1241 294 359 21 0 chr13 86003525 86003670 -34280642 + L1MEe LINE L1 137 284 -4570 2 1241 340 302 182 23 chr13 86003851 86004027 -34280285 - MER3 DNA MER1_type -5 204 1 3 1241 271 352 135 28 chr13 86004086 86004656 -34279656 - Lx8 LINE L1 -2 7471 6841 4 1241 1373 40 11 0 chr13 86004956 86005131 -34279181 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 5 1241 1359 301 92 25 chr13 86005132 86005694 -34278618 - Lx8 LINE L1 -624 6849 6250 4 1241 231 197 16 0 chr13 86005755 86005816 -34278496 + Lx6 LINE L1 7399 7460 0 6 1241 1211 174 111 124 chr13 86006315 86006703 -34277609 - ORR1C2 LTR MaLR -1 383 1 7 1241 198 71 0 0 chr13 86006922 86006950 -34277362 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 8 1241 850 117 0 14 chr13 86006959 86007106 -34277206 - L1Md_F2 LINE L1 0 6582 6438 9 1241 205 200 150 0 chr13 86007117 86007177 -34277135 - MIRb SINE MIR -1 261 193 1 1241 242 176 0 0 chr13 86007514 86007565 -34276747 + Lx2A LINE L1 6953 7003 -5 1 1241 613 268 56 9 chr13 86007760 86007975 -34276337 + L1_Mur3 LINE L1 3641 3865 -2015 1 1241 4128 270 50 63 chr13 86008010 86009304 -34275008 - ORR1C2-int LTR MaLR -68 1302 27 7 1241 711 247 55 5 chr13 86009323 86009522 -34274790 - ORR1C2 LTR MaLR 0 370 162 7 1241 7287 89 12 28 chr13 86009522 86009994 -34274318 + L1_Mus1 LINE L1 5195 5668 -215 1 1241 2833 54 0 0 chr13 86009994 86010347 -34273965 - L1Md_T LINE L1 0 6582 6230 1 1241 7287 72 15 17 chr13 86010347 86011252 -34273060 + L1_Mus1 LINE L1 5669 6567 0 1 1241 553 278 36 77 chr13 86011293 86011424 -34272888 - ORR1C2 LTR MaLR -209 161 31 7 1241 1230 167 0 26 chr13 86011424 86011651 -34272661 - URR1B DNA MER1_type 0 225 5 1 1241 553 278 36 77 chr13 86011651 86011687 -34272625 - ORR1C2 LTR MaLR -340 30 1 7 1241 1041 228 29 0 chr13 86011687 86011941 -34272371 + L1_Mur3 LINE L1 3888 4152 -1994 1 1241 2595 210 79 9 chr13 86011942 86012475 -34271837 - RMER15 LTR ERVL -5 570 1 1 1241 507 239 96 20 chr13 86012479 86012692 -34271620 + L1_Mur3 LINE L1 4120 4377 -1763 1 1241 443 309 14 14 chr13 86012948 86013089 -34271223 + RMER10B LTR ERVL 247 387 -11 1 1241 435 161 0 0 chr13 86013104 86013222 -34271090 + A-rich Low_complexity Low_complexity 1 118 0 1 1241 270 190 88 12 chr13 86013227 86013307 -34271005 + L1_Mur3 LINE L1 4387 4472 -1408 1 1241 434 195 0 0 chr13 86013690 86013772 -34270540 + RMER15 LTR ERVL 22 103 -472 2 1241 935 270 40 29 chr13 86013854 86014129 -34270183 + Lx7 LINE L1 6511 6788 -908 2 1241 2147 184 121 42 chr13 86014144 86014672 -34269640 + RMER15 LTR ERVL 2 571 -4 2 1241 21 0 0 0 chr13 86014983 86015004 -34269308 + AT_rich Low_complexity Low_complexity 1 21 0 2 1241 37818 41 1 2 chr13 86015610 86021823 -34262489 - L1Md_T LINE L1 0 6585 285 2 1241 871 346 98 14 chr13 86021870 86022494 -34261818 - BLACKJACK DNA AcHobo -2003 941 266 2 1241 263 254 126 47 chr13 86024330 86024520 -34259792 + L1MA9 LINE L1 6044 6248 -64 2 1241 307 227 130 32 chr13 86027257 86027297 -34257015 + L1MEe LINE L1 666 707 -4147 2 1241 1081 101 0 0 chr13 86027297 86027445 -34256867 + B1_Mus1 SINE Alu 1 148 0 2 1241 307 227 130 32 chr13 86027445 86027527 -34256785 + L1MEe LINE L1 708 800 -4054 2 1241 2487 172 44 8 chr13 86028844 86029318 -34254994 + RLTR20B3 LTR ERVK 80 570 -7 2 1241 257 213 98 0 chr13 86029455 86029516 -34254796 + B1_Mur2 SINE Alu 83 149 0 3 1241 1032 156 0 0 chr13 86029545 86029725 -34254587 + GA-rich Low_complexity Low_complexity 1 180 0 3 1241 207 0 0 0 chr13 86030199 86030222 -34254090 + (TTGG)n Simple_repeat Simple_repeat 2 24 0 3 1241 1059 75 0 58 chr13 86030222 86030371 -34253941 - B1_Mus1 SINE Alu -7 141 1 3 1241 48 81 0 0 chr13 86032433 86032544 -34251768 + AT_rich Low_complexity Low_complexity 1 111 0 3 1241 446 258 207 53 chr13 86032825 86033144 -34251168 + RLTR9A LTR ERVK 1 368 0 3 1241 704 234 0 0 chr13 86033349 86033490 -34250822 - B1_Mur2 SINE Alu -7 142 2 3 1241 2934 76 29 2 chr13 86033549 86033959 -34250353 - BGLII LTR ERVK 0 421 1 3 1241 24 32 0 0 chr13 86034216 86034247 -34250065 + AT_rich Low_complexity Low_complexity 1 31 0 3 1241 4222 132 50 63 chr13 86034329 86035230 -34249082 + RMER17D LTR ERVK 1 889 0 3 1241 25 83 0 0 chr13 86035418 86035478 -34248834 + AT_rich Low_complexity Low_complexity 1 60 0 4 1241 1734 159 19 19 chr13 86035667 86035987 -34248325 + Lx LINE L1 6335 6654 0 4 1241 1830 146 69 14 chr13 86036167 86036515 -34247797 + RLTR9A LTR ERVK 1 367 -1 4 1241 588 14 0 0 chr13 86037876 86037945 -34246367 + (TC)n Simple_repeat Simple_repeat 1 69 0 4 1241 236 111 22 0 chr13 86037945 86037989 -34246323 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1241 436 311 78 48 chr13 86038242 86038448 -34245864 + RLTR16 LTR ERVK 23 234 -271 4 1241 337 326 93 78 chr13 86040875 86041232 -34243080 - MTE2a LTR MaLR -67 352 1 4 1241 2817 167 10 16 chr13 86041316 86041825 -34242487 - RLTR11A LTR ERVK 0 528 9 4 1241 676 300 78 18 chr13 86043399 86044101 -34240211 - L1_Mur3 LINE L1 -59 5788 5075 4 1241 244 316 40 10 chr13 86044993 86045092 -34239220 + L1MA4 LINE L1 3527 3628 -2515 4 1241 209 141 83 14 chr13 86045153 86045225 -34239087 + (TAGA)n Simple_repeat Simple_repeat 2 78 0 5 1241 360 0 0 0 chr13 86045304 86045344 -34238968 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1241 346 207 47 47 chr13 86045344 86045471 -34238841 + Lx9 LINE L1 7511 7637 -7 5 1241 225 286 0 21 chr13 86045494 86045587 -34238725 + L1MA4 LINE L1 3948 4038 -2105 4 1241 1391 298 66 28 chr13 86045619 86047006 -34237306 + L1MA4 LINE L1 4454 5896 -404 4 1241 1056 270 77 13 chr13 86047030 86047265 -34237047 - ORR1B1 LTR MaLR 0 394 158 5 1241 209 57 29 0 chr13 86047265 86047300 -34237012 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 5 1241 1056 270 77 13 chr13 86047300 86047364 -34236948 - ORR1B1 LTR MaLR -237 157 77 5 1241 7301 64 5 12 chr13 86047364 86048329 -34235983 + L1_Mus2 LINE L1 5606 6563 -3 5 1241 337 250 9 140 chr13 86048329 86048436 -34235876 - ORR1B1 LTR MaLR -301 93 1 5 1241 464 278 19 38 chr13 86048695 86048852 -34235460 + RSINE1 SINE B4 11 164 -1 5 1241 27 73 0 0 chr13 86050836 86050891 -34233421 + AT_rich Low_complexity Low_complexity 1 55 0 5 1241 271 151 38 0 chr13 86051107 86051160 -34233152 + L1_Mur2 LINE L1 566 620 -6466 5 1241 1412 125 41 45 chr13 86051161 86051404 -34232908 + RLTR1B LTR ERV1 271 512 0 5 1241 2396 83 17 3 chr13 86051406 86051758 -34232554 - BGLII LTR ERVK -64 357 1 6 1241 9571 190 20 31 chr13 86051759 86052314 -34231998 + L1_Mur2 LINE L1 1483 2056 -3830 5 1241 396 0 0 0 chr13 86052314 86052358 -34231954 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1241 9571 190 20 31 chr13 86052358 86053561 -34230751 + L1_Mur2 LINE L1 2057 3270 -2616 5 1241 1066 76 0 7 chr13 86053561 86053706 -34230606 + B1_Mm SINE Alu 1 144 -3 6 1241 9571 190 20 31 chr13 86053706 86054088 -34230224 + L1_Mur2 LINE L1 3271 3600 -2286 5 1241 3053 234 43 42 chr13 86054086 86054865 -34229447 + L1VL4 LINE L1 416 1189 -5468 6 1241 405 0 0 0 chr13 86054865 86054910 -34229402 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1241 183 42 0 0 chr13 86054911 86054935 -34229377 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1241 20950 116 23 23 chr13 86054935 86058886 -34225426 + L1VL4 LINE L1 1190 5151 -732 6 1241 1007 282 63 42 chr13 86058907 86059285 -34225027 - RodERV21-int LTR ERV1 -3459 1532 1147 6 1241 941 296 37 48 chr13 86059411 86059790 -34224522 - RodERV21-int LTR ERV1 -3900 1091 717 6 1241 270 326 0 11 chr13 86059835 86059928 -34224384 - RMER17C-int LTR ERVK -2783 455 364 6 1241 432 0 0 0 chr13 86061539 86061587 -34222725 + (TA)n Simple_repeat Simple_repeat 2 49 0 6 1241 213 281 39 77 chr13 86061928 86062032 -34222280 - MIRm SINE MIR -158 118 19 6 1241 472 264 226 60 chr13 86062399 86062713 -34221599 + RLTR9A LTR ERVK 3 368 0 7 1241 186 71 0 0 chr13 86062866 86062894 -34221418 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 7 1241 1142 49 7 0 chr13 86062905 86063047 -34221265 - B1_Mus2 SINE Alu 0 147 5 7 1241 296 320 0 0 chr13 86063213 86063313 -34220999 + GA-rich Low_complexity Low_complexity 1 100 0 7 1241 674 296 162 39 chr13 86063516 86063850 -34220462 + MTE2b LTR MaLR 5 379 0 7 1241 304 182 65 0 chr13 86064655 86064732 -34219580 - MARNA DNA Mariner -352 234 153 7 1241 21 0 0 0 chr13 86064820 86064841 -34219471 + AT_rich Low_complexity Low_complexity 1 21 0 7 1241 612 237 8 0 chr13 86064929 86065047 -34219265 - B1_Mur1 SINE Alu -13 136 18 7 1241 3176 53 177 2 chr13 86065270 86065706 -34218606 + RLTR1B LTR ERV1 1 512 0 7 1241 602 257 35 7 chr13 86065730 86065875 -34218437 + MER5A1 DNA MER1_type 16 164 -2 7 1241 184 125 0 30 chr13 86067250 86067283 -34217029 - L2b LINE L2 -13 3362 3331 8 1241 596 108 17 0 chr13 86067999 86068119 -34216193 + (TTTTTG)n Simple_repeat Simple_repeat 3 124 0 8 1241 1154 68 0 0 chr13 86068121 86068268 -34216044 - B1_Mus2 SINE Alu 0 147 1 8 1241 30 45 0 0 chr13 86068268 86068312 -34216000 + AT_rich Low_complexity Low_complexity 1 44 0 8 1241 27 0 0 0 chr13 86068522 86068549 -34215763 + AT_rich Low_complexity Low_complexity 1 27 0 8 1241 537 30 0 0 chr13 86068643 86068710 -34215602 + (CA)n Simple_repeat Simple_repeat 2 68 0 8 1241 986 245 68 8 chr13 86068715 86068978 -34215334 - Lx9 LINE L1 -179 7465 7187 8 1241 37878 45 0 3 chr13 86068984 86075368 -34208944 - L1Md_T LINE L1 0 6585 126 8 1241 1942 215 41 25 chr13 86075371 86075814 -34208498 - Lx9 LINE L1 -446 7198 6749 8 1241 992 331 44 3 chr13 86076387 86076726 -34207586 + MTE2b LTR MaLR 19 371 -8 8 1241 1591 316 129 41 chr13 86076721 86077459 -34206853 + MTE-int LTR MaLR 43 845 -735 8 1241 30685 109 18 23 chr13 86077459 86080582 -34203730 + L1Md_F2 LINE L1 418 3485 -2398 9 1241 315 0 0 0 chr13 86080582 86080617 -34203695 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 1241 30685 83 16 2 chr13 86080617 86082657 -34201655 + L1Md_F2 LINE L1 3486 5584 -299 9 1241 6944 85 30 4 chr13 86082658 86083616 -34200696 + L1Md_F2 LINE L1 5587 6569 -13 9 1241 1261 301 156 26 chr13 86083617 86083751 -34200561 + MTE-int LTR MaLR 837 989 -591 8 1241 4264 15 2 0 chr13 86083751 86084232 -34200080 + LTRIS_Mm LTR ERV1 1 482 0 9 1241 1261 301 156 26 chr13 86084232 86084558 -34199754 + MTE-int LTR MaLR 990 1357 -223 8 1241 417 222 0 0 chr13 86084562 86084661 -34199651 + T-rich Low_complexity Low_complexity 1 99 0 9 1241 1126 82 0 0 chr13 86084662 86084809 -34199503 - B1_Mm SINE Alu 0 147 1 9 1241 424 313 121 43 chr13 86084813 86085026 -34199286 + MTEa-int LTR MaLR 1186 1569 -11 9 1241 922 325 53 42 chr13 86085035 86085395 -34198917 + MTEa LTR MaLR 1 364 -15 9 1241 1132 68 0 7 chr13 86085484 86085631 -34198681 + B1_Mm SINE Alu 2 147 0 9 1241 475 316 21 36 chr13 86085882 86086076 -34198236 + B3A SINE B2 3 193 -5 9 1241 4517 50 0 0 chr13 86086104 86086658 -34197654 - L1Md_F2 LINE L1 -12 6570 6017 9 1241 1664 91 17 0 chr13 86087994 86088226 -34196086 - L1_Mus1 LINE L1 0 6567 6332 9 1241 2285 167 0 17 chr13 86088395 86088809 -34195503 + MTB_Mm LTR MaLR 1 407 0 1 1241 280 255 67 67 chr13 86089023 86089187 -34195125 - Lx9 LINE L1 0 7644 7481 1 1241 433 114 44 0 chr13 86089187 86089301 -34195011 + (TA)n Simple_repeat Simple_repeat 2 120 0 1 1241 808 180 90 0 chr13 86089323 86089501 -34194811 - Lx9 LINE L1 -153 7491 7298 1 1241 189 0 0 0 chr13 86090604 86090625 -34193687 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1241 248 36 51 51 chr13 86093522 86093581 -34190731 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 1 1241 1260 299 63 5 chr13 86094935 86095331 -34188981 - MTD LTR MaLR 0 419 1 1 1241 24 0 0 0 chr13 86095755 86095779 -34188533 + AT_rich Low_complexity Low_complexity 1 24 0 1 1241 182 360 26 13 chr13 86096749 86096825 -34187487 - L4 LINE RTE -780 1249 1173 1 1241 600 291 13 49 chr13 86096926 86097125 -34187187 - L1M2 LINE L1 -535 5756 5560 1 1241 2882 68 39 5 chr13 86097125 86097508 -34186804 - MTA_Mm LTR MaLR 0 396 1 1 1241 600 291 13 49 chr13 86097508 86097532 -34186780 - L1M2 LINE L1 -732 5559 5541 1 1241 235 192 0 27 chr13 86097539 86097614 -34186698 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 1 1241 6938 107 36 3 chr13 86098818 86100226 -34184086 - L1_Mus3 LINE L1 -7 6631 5176 1 1241 583 252 47 0 chr13 86100617 86100744 -34183568 - ETnERV2-int LTR ERVK -204 7202 7070 1 1241 4125 150 1 6 chr13 86100745 86101434 -34182878 - L1_Mus3 LINE L1 -701 5182 4497 1 1241 2416 201 16 33 chr13 86101685 86102231 -34182081 + RLTR31_Mur LTR ERVK 1 537 -16 1 1241 5032 121 46 14 chr13 86102287 86103085 -34181227 - Lx LINE L1 -1 6653 5830 1 1241 1952 160 18 50 chr13 86103085 86103481 -34180831 + L1_Mur2 LINE L1 5074 5456 -421 1 1241 858 139 0 0 chr13 86103481 86103578 -34180734 + (A)n Simple_repeat Simple_repeat 1 97 0 1 1241 1095 96 7 0 chr13 86103578 86103724 -34180588 + B1_Mm SINE Alu 1 147 0 1 1241 858 139 0 0 chr13 86103724 86103770 -34180542 + (A)n Simple_repeat Simple_repeat 1 46 0 1 1241 2464 143 0 0 chr13 86103798 86104176 -34180136 + L1_Mm LINE L1 5453 5830 -53 1 1241 386 0 41 0 chr13 86104260 86104309 -34180003 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1 1241 1018 260 168 60 chr13 86105178 86105665 -34178647 + RMER2 LTR ERV1 1 540 -27 1 1241 1220 117 39 0 chr13 86107218 86107397 -34176915 - B2_Mm2 SINE B2 -7 188 3 1 1241 200 111 0 62 chr13 86107485 86107515 -34176797 + A-rich Low_complexity Low_complexity 2 28 0 1 1241 423 0 0 0 chr13 86107515 86107562 -34176750 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 1241 200 111 0 62 chr13 86107562 86107579 -34176733 + A-rich Low_complexity Low_complexity 29 45 0 1 1241 471 242 71 24 chr13 86108352 86108429 -34175883 - RLTR20A LTR ERVK 0 578 503 1 1241 558 43 0 0 chr13 86108429 86108498 -34175814 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1241 306 0 0 0 chr13 86108508 86108542 -34175770 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1241 471 242 71 24 chr13 86108542 86108580 -34175732 - RLTR20A LTR ERVK -95 483 447 1 1241 994 239 30 63 chr13 86108601 86108914 -34175398 - RLTR20A LTR ERVK -221 313 3 1 1241 24 77 0 0 chr13 86109792 86109844 -34174468 + AT_rich Low_complexity Low_complexity 1 52 0 1 1241 26 0 0 0 chr13 86109855 86109881 -34174431 + AT_rich Low_complexity Low_complexity 1 26 0 1 1241 30 69 0 0 chr13 86109904 86109962 -34174350 + AT_rich Low_complexity Low_complexity 1 58 0 1 1241 1357 173 11 178 chr13 86110185 86110641 -34173671 + L1_Mur3 LINE L1 4420 4799 -1081 1 1241 6307 240 40 14 chr13 86110645 86112206 -34172106 + Lx7 LINE L1 5626 7228 -468 1 1241 276 245 88 26 chr13 86112533 86112646 -34171666 - PB1D7 SINE Alu 0 120 1 1 1241 390 300 39 55 chr13 86112845 86112972 -34171340 + MER5A DNA MER1_type 2 126 -63 1 1241 2017 229 35 17 chr13 86113783 86113858 -34170454 - RLTR16 LTR ERVK -12 493 417 1 1241 333 0 0 0 chr13 86113858 86113895 -34170417 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1241 2017 229 35 17 chr13 86113895 86114148 -34170164 - RLTR16 LTR ERVK -89 416 154 1 1241 301 0 68 0 chr13 86114148 86114192 -34170120 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 155 2017 229 35 17 chr13 86114192 86114345 -34169967 - RLTR16 LTR ERVK -352 153 3 1 1242 21 36 0 0 chr13 86114968 86114996 -34169316 + AT_rich Low_complexity Low_complexity 1 28 0 1 1242 373 42 0 7 chr13 86115142 86115204 -34169108 - ORR1A1-int LTR MaLR -1310 60 1 1 1242 2646 51 33 0 chr13 86115204 86115539 -34168773 - ORR1A1 LTR MaLR 0 346 1 1 1242 289 360 43 115 chr13 86115539 86115862 -34168450 - L3 LINE CR1 -99 4390 4091 1 1242 4026 225 99 36 chr13 86115901 86116999 -34167313 + Lx7 LINE L1 6529 7695 -1 1 1242 279 328 147 28 chr13 86117058 86117409 -34166903 + Arthur1 DNA Tip100 36 428 -3519 1 1242 269 236 199 7 chr13 86117398 86117539 -34166773 + Arthur1 DNA Tip100 3368 3535 -412 1 1242 7565 91 5 21 chr13 86117599 86118714 -34165598 - L1_Mus3 LINE L1 -6 6632 5536 1 1242 292 92 0 44 chr13 86118969 86119037 -34165275 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 1 1242 1205 49 0 0 chr13 86119038 86119182 -34165130 - B1_Mm SINE Alu 0 147 4 1 1242 325 330 10 31 chr13 86119342 86119439 -34164873 + ID_B1 SINE B4 100 194 -30 1 1242 232 146 0 47 chr13 86119462 86119494 -34164818 + ID_B1 SINE B4 184 215 -9 1 1242 198 0 0 0 chr13 86119494 86119516 -34164796 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1242 373 260 0 0 chr13 86119724 86119801 -34164511 - L3 LINE CR1 -108 4381 4305 1 1242 301 221 105 0 chr13 86119903 86119998 -34164314 - L1MA8 LINE L1 -7 6284 6180 1 1242 916 252 10 71 chr13 86120022 86120317 -34163995 + Lx6 LINE L1 7136 7412 -48 1 1242 977 296 50 42 chr13 86120981 86121341 -34162971 - MLT1A0 LTR MaLR 0 365 3 1 1242 1931 139 19 32 chr13 86121930 86122301 -34162011 - RLTR9A LTR ERVK 0 368 3 1 1242 340 348 75 43 chr13 86123275 86123554 -34160758 + L2 LINE L2 2654 2941 -478 1 1242 206 107 52 35 chr13 86124511 86124569 -34159743 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1242 8233 134 55 5 chr13 86125484 86127752 -34156560 + L1_Mus4 LINE L1 4299 6634 -2 1 1242 191 215 96 48 chr13 86127955 86128038 -34156274 + L3 LINE CR1 3328 3414 -1075 1 1242 301 95 16 16 chr13 86128821 86128885 -34155427 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 1 1242 38 39 0 0 chr13 86128921 86128973 -34155339 + AT_rich Low_complexity Low_complexity 1 52 0 1 1242 189 0 0 0 chr13 86128973 86128994 -34155318 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1 1242 4270 195 33 25 chr13 86128996 86129900 -34154412 - Lx4B LINE L1 -23 7035 6125 1 1242 1543 191 14 177 chr13 86129895 86130007 -34154305 - L1_Mur2 LINE L1 -404 5482 5377 1 1242 1899 94 11 11 chr13 86130007 86130286 -34154026 + L1_Mus3 LINE L1 6346 6624 -14 1 1242 186 43 0 0 chr13 86130286 86130309 -34154003 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 1242 1710 171 15 80 chr13 86130309 86130765 -34153547 - L1_Mur2 LINE L1 -510 5376 4995 1 1242 341 293 90 8 chr13 86131282 86131416 -34152896 - ID_B1 SINE B4 -2 222 78 1 1242 512 171 8 30 chr13 86131549 86131682 -34152630 + GA-rich Low_complexity Low_complexity 1 130 0 1 1242 219 114 0 0 chr13 86131793 86131828 -34152484 + (CAA)n Simple_repeat Simple_repeat 2 36 0 1 1242 24 32 0 0 chr13 86132603 86132634 -34151678 + AT_rich Low_complexity Low_complexity 1 31 0 1 1242 207 218 0 0 chr13 86133538 86133593 -34150719 + GA-rich Low_complexity Low_complexity 1 55 0 1 1242 339 355 68 47 chr13 86133690 86134036 -34150276 + MTE2b LTR MaLR 4 379 0 1 1242 36 70 0 0 chr13 86134041 86134112 -34150200 + AT_rich Low_complexity Low_complexity 1 71 0 1 1242 204 97 0 0 chr13 86134133 86134164 -34150148 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1242 23 0 0 0 chr13 86135173 86135196 -34149116 + AT_rich Low_complexity Low_complexity 1 23 0 1 1242 335 265 0 20 chr13 86135775 86135875 -34148437 + MER45A DNA Tip100 78 175 -3 1 1242 243 0 0 0 chr13 86135996 86136023 -34148289 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1242 801 0 0 0 chr13 86136882 86136971 -34147341 + (TTC)n Simple_repeat Simple_repeat 2 90 0 1 1242 386 378 20 53 chr13 86136971 86137210 -34147102 + L3 LINE CR1 2843 3073 -1416 1 1242 234 372 76 36 chr13 86137694 86137945 -34146367 - MLT1I LTR MaLR -38 373 113 1 1242 2533 88 6 3 chr13 86138185 86138539 -34145773 - L1Md_F2 LINE L1 -613 5270 4916 1 1242 2525 74 3 0 chr13 86138534 86138858 -34145454 + L1Md_F2 LINE L1 5262 5586 -297 1 1242 7403 75 4 12 chr13 86138858 86139850 -34144462 + L1Md_F2 LINE L1 5587 6570 -12 1 1242 1309 178 30 196 chr13 86140050 86140510 -34143802 + ORR1C2 LTR MaLR 1 384 0 1 1242 483 115 103 0 chr13 86140697 86140775 -34143537 + MT2A LTR ERVL 1 86 -447 1 1242 6432 67 5 4 chr13 86140799 86141632 -34142680 - L1_Mus2 LINE L1 -3 6563 5730 1 1242 1031 270 46 98 chr13 86141633 86142043 -34142269 + MT2A LTR ERVL 74 462 -71 1 1242 42 65 0 0 chr13 86142044 86142121 -34142191 + AT_rich Low_complexity Low_complexity 1 77 0 1 1242 363 349 72 0 chr13 86142410 86142645 -34141667 + Lx8 LINE L1 6911 7162 -311 1 1242 276 100 0 0 chr13 86143146 86143186 -34141126 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 1242 216 167 0 0 chr13 86143317 86143365 -34140947 + (TATTG)n Simple_repeat Simple_repeat 5 52 0 1 1242 578 228 8 16 chr13 86143645 86143770 -34140542 - ORR1C2 LTR MaLR 0 384 261 1 1242 926 218 119 8 chr13 86143767 86144003 -34140309 + ORR1B1-int LTR MaLR 883 1144 -365 1 1242 469 257 83 0 chr13 86144012 86144121 -34140191 - MERVL_2A-int LTR ERVL -1298 4463 4346 1 1242 466 302 43 7 chr13 86144121 86144261 -34140051 - ORR1C2 LTR MaLR -74 310 166 1 1242 366 168 212 40 chr13 86144257 86144356 -34139956 + PB1D9 SINE Alu 5 120 0 1 1242 992 186 41 37 chr13 86144285 86144530 -34139782 - ORR1C1 LTR MaLR -132 246 1 1 1242 912 309 11 54 chr13 86145835 86146112 -34138200 + Lx5 LINE L1 6632 6896 -154 1 1242 516 14 41 0 chr13 86146113 86146186 -34138126 + (TA)n Simple_repeat Simple_repeat 2 77 0 1 1242 9629 69 9 0 chr13 86146186 86148108 -34136204 - L1Md_F2 LINE L1 -18 6564 4625 1 1242 280 322 26 33 chr13 86148110 86148261 -34136051 + Lx6 LINE L1 7295 7444 -16 1 1242 1179 61 0 7 chr13 86148539 86148688 -34135624 + B1_Mus1 SINE Alu 1 148 0 1 1242 231 152 0 0 chr13 86148689 86148735 -34135577 + A-rich Low_complexity Low_complexity 1 46 0 1 1242 25 31 0 0 chr13 86150850 86150882 -34133430 + AT_rich Low_complexity Low_complexity 1 32 0 1 1242 233 313 61 0 chr13 86151592 86151707 -34132605 - L1MC4 LINE L1 -804 7238 7117 2 1242 28 0 0 0 chr13 86152242 86152270 -34132042 + AT_rich Low_complexity Low_complexity 1 28 0 2 1242 441 276 0 0 chr13 86153499 86153597 -34130715 - Tigger7 DNA MER2_type -2143 348 251 2 1242 887 163 6 0 chr13 86153691 86153857 -34130455 + CT-rich Low_complexity Low_complexity 4 170 0 2 1242 1596 186 16 23 chr13 86153932 86154240 -34130072 - Lx4B LINE L1 0 7058 6753 2 1242 450 36 0 0 chr13 86154242 86154298 -34130014 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1242 431 150 0 2 chr13 86154302 86154373 -34129939 - Lx5 LINE L1 -236 6822 6734 2 1242 270 0 0 0 chr13 86154376 86154406 -34129906 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1242 1541 153 34 14 chr13 86154414 86154484 -34129828 - Lx4B LINE L1 -240 6818 6744 2 1242 576 29 0 0 chr13 86154484 86154554 -34129758 + (TG)n Simple_repeat Simple_repeat 2 71 0 2 1242 1541 153 34 14 chr13 86154554 86154775 -34129537 - Lx4B LINE L1 -315 6743 6522 2 1242 306 106 0 0 chr13 86155148 86155195 -34129117 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1242 504 0 0 0 chr13 86156152 86156208 -34128104 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 1242 369 0 0 0 chr13 86156599 86156640 -34127672 + (T)n Simple_repeat Simple_repeat 1 41 0 2 1242 216 368 0 0 chr13 86157323 86157410 -34126902 - L2 LINE L2 -1044 2375 2289 2 1242 22 70 0 0 chr13 86157484 86157527 -34126785 + AT_rich Low_complexity Low_complexity 1 43 0 2 1242 1638 234 13 40 chr13 86159053 86159431 -34124881 - ORR1D1 LTR MaLR -6 368 1 2 1242 341 212 91 0 chr13 86159477 86159543 -34124769 + ORR1A2 LTR MaLR 1 72 -255 2 1242 2095 181 13 3 chr13 86159544 86159916 -34124396 - ORR1D1-int LTR MaLR -1375 588 213 2 1242 3646 174 28 21 chr13 86159916 86160374 -34123938 + Lx LINE L1 622 1070 -5587 2 1242 5885 68 0 3 chr13 86160374 86161140 -34123172 + L1Md_F2 LINE L1 5818 6581 -1 2 1242 11402 196 115 29 chr13 86161140 86166225 -34118087 + Lx LINE L1 1071 6649 -5 2 1242 540 195 53 0 chr13 86166231 86166344 -34117968 - ORR1D1-int LTR MaLR -1781 182 64 2 1242 255 167 0 0 chr13 86166338 86166380 -34117932 - ORR1D2-int LTR MaLR -1284 225 184 2 1242 263 173 58 0 chr13 86166424 86166476 -34117836 + ORR1A4 LTR MaLR 275 329 0 2 1242 1867 204 21 18 chr13 86167359 86167930 -34116382 + Lx2 LINE L1 5777 6365 -685 2 1242 7969 99 8 11 chr13 86167928 86168133 -34116179 + L1_Mur1 LINE L1 2314 2513 -3373 2 1242 4176 106 28 109 chr13 86168133 86168947 -34115365 - RMER17A LTR ERVK -3 748 1 2 1242 7969 99 8 11 chr13 86168947 86169958 -34114354 + L1_Mur1 LINE L1 2514 3527 -2359 2 1242 3038 71 5 2 chr13 86169960 86170353 -34113959 + MTA_Mm LTR MaLR 3 396 0 2 1242 868 289 146 12 chr13 86172153 86172475 -34111837 - ORR1D2 LTR MaLR -5 365 1 2 1242 273 269 50 25 chr13 86172548 86172628 -34111684 - RMER15 LTR ERVL -156 419 338 2 1242 341 282 76 43 chr13 86172753 86172941 -34111371 + MLT2B1 LTR ERVL 225 567 0 2 1242 276 377 81 11 chr13 86172950 86173135 -34111177 + L2 LINE L2 2681 2878 -541 2 1242 1183 48 0 7 chr13 86173138 86173286 -34111026 + B1_Mus1 SINE Alu 1 147 -1 2 1242 214 87 21 21 chr13 86173291 86173338 -34110974 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 2 1242 216 340 121 25 chr13 86173350 86173507 -34110805 + L2 LINE L2 2876 3047 -372 2 1242 2943 62 39 8 chr13 86173552 86173940 -34110372 - MTB LTR MaLR 0 400 1 2 1242 22 0 0 0 chr13 86174161 86174183 -34110129 + AT_rich Low_complexity Low_complexity 1 22 0 2 1242 567 270 47 57 chr13 86174183 86174395 -34109917 - Lx6 LINE L1 -265 7195 6986 2 1242 487 275 118 51 chr13 86174436 86174750 -34109562 + RMER5 LTR ERV1 190 524 -10 2 1242 320 339 0 74 chr13 86175004 86175125 -34109187 + PB1D10 SINE Alu 6 117 0 2 1242 3178 182 71 6 chr13 86175249 86175886 -34108426 - RLTR17 LTR ERVK -14 678 1 2 1242 577 256 49 86 chr13 86175894 86176138 -34108174 - RLTR12B LTR ERVK -48 480 246 2 1242 200 167 0 0 chr13 86176141 86176171 -34108141 + polypyrimidine Low_complexity Low_complexity 1 30 0 2 1242 183 318 62 45 chr13 86177109 86177221 -34107091 + MIRm SINE MIR 161 274 -2 2 1242 1018 230 13 23 chr13 86177840 86178174 -34106138 + MTC LTR MaLR 10 419 -2 2 1242 515 309 45 41 chr13 86178777 86179067 -34105245 - B4A SINE B4 0 292 2 2 1242 241 267 89 0 chr13 86179189 86179279 -34105033 + L1ME2z LINE L1 6010 6107 -337 2 1242 2629 285 93 19 chr13 86179486 86180471 -34103841 - Lx7 LINE L1 -985 6711 5654 2 1242 284 335 81 89 chr13 86184105 86184351 -34099961 - B4 SINE B4 -47 245 2 2 1242 227 213 21 0 chr13 86184856 86184903 -34099409 - RMER30 DNA MER1_type -144 58 11 2 1242 357 261 99 0 chr13 86186938 86187049 -34097263 + MER90 LTR ERV1 1 122 -453 2 1242 431 136 34 0 chr13 86187068 86187156 -34097156 - Lx LINE L1 0 6654 6564 2 1242 276 173 0 0 chr13 86187194 86187246 -34097066 - Lx9 LINE L1 -161 7483 7432 2 1242 500 178 23 30 chr13 86187246 86187379 -34096933 + Lx9 LINE L1 7508 7639 -5 2 1242 463 56 28 0 chr13 86187594 86187665 -34096647 + (TCTA)n Simple_repeat Simple_repeat 4 76 0 2 1242 657 38 0 0 chr13 86187888 86187968 -34096344 + (GA)n Simple_repeat Simple_repeat 1 80 0 2 1242 1257 38 0 6 chr13 86187985 86188142 -34096170 - L1_Mus1 LINE L1 -1 6566 6411 2 1242 2317 270 60 33 chr13 86188323 86189055 -34095257 - Lx8 LINE L1 -2 7471 6720 2 1242 1008 303 62 50 chr13 86189651 86189896 -34094416 + Lx6 LINE L1 6951 7137 -323 2 1242 1584 143 38 139 chr13 86189896 86190262 -34094050 + ORR1A4 LTR MaLR 1 329 0 2 1242 1008 301 61 43 chr13 86190262 86190563 -34093749 + Lx6 LINE L1 7138 7434 -26 2 1242 540 295 69 56 chr13 86190972 86191273 -34093039 - B4 SINE B4 -18 274 6 2 1242 272 91 23 0 chr13 86191315 86191359 -34092953 + (TCTCCC)n Simple_repeat Simple_repeat 5 49 0 2 1242 207 0 0 0 chr13 86191455 86191478 -34092834 + (CA)n Simple_repeat Simple_repeat 2 24 0 2 1242 252 0 0 0 chr13 86191480 86191508 -34092804 + (CCA)n Simple_repeat Simple_repeat 2 29 0 2 1242 205 186 0 0 chr13 86193390 86193433 -34090879 + (TCTCTG)n Simple_repeat Simple_repeat 6 48 0 2 1242 1242 152 49 9 chr13 86193440 86193665 -34090647 - BGLII_B LTR ERVK 0 441 208 2 1242 1598 144 18 61 chr13 86193665 86193991 -34090321 - RLTRETN_Mm LTR ERVK 0 322 11 2 1242 1471 112 5 5 chr13 86193997 86194213 -34090099 - BGLII_B LTR ERVK -222 219 4 2 1242 231 247 0 64 chr13 86195281 86195359 -34088953 - L1MC4 LINE L1 -180 7862 7790 2 1242 623 296 95 43 chr13 86195968 86196546 -34087766 - L1MC4 LINE L1 -757 7285 6678 2 1242 327 85 0 0 chr13 86196885 86196932 -34087380 + (TTCC)n Simple_repeat Simple_repeat 4 50 0 2 1242 1495 206 89 91 chr13 86197541 86197957 -34086355 - MTD LTR MaLR 0 419 5 2 1242 2874 43 0 6 chr13 86197975 86198448 -34085864 - L1Md_F3 LINE L1 0 6584 6209 2 1242 487 152 76 0 chr13 86198440 86198532 -34085780 - L1Md_T LINE L1 -449 6133 6035 2 1242 23 78 0 0 chr13 86198791 86198842 -34085470 + AT_rich Low_complexity Low_complexity 1 51 0 2 1242 332 258 95 24 chr13 86198881 86199019 -34085293 + Lx8 LINE L1 5735 5871 -1602 2 1242 515 300 120 29 chr13 86199058 86199233 -34085079 + MTE2b LTR MaLR 85 275 -104 2 1242 369 321 43 14 chr13 86199286 86199425 -34084887 + Tigger7 DNA MER2_type 2346 2488 -3 2 1242 416 347 73 57 chr13 86199823 86200328 -34083984 + L4 LINE RTE 1513 2025 -4 2 1242 5233 132 27 9 chr13 86200908 86201760 -34082552 + Lx LINE L1 5784 6650 -4 2 1242 2436 201 117 3 chr13 86202012 86202154 -34082158 + MYSERV16_I-int LTR ERVK 1345 1490 -836 2 1242 498 33 0 0 chr13 86202154 86202214 -34082098 + (TA)n Simple_repeat Simple_repeat 2 61 0 2 1242 2436 201 117 3 chr13 86202214 86202689 -34081623 + MYSERV16_I-int LTR ERVK 1491 2031 -295 2 1242 1945 134 24 60 chr13 86202698 86203031 -34081281 + ORR1A2 LTR MaLR 5 325 -2 2 1242 1006 159 81 53 chr13 86203033 86203318 -34080994 + MYSERV16_I-int LTR ERVK 2034 2326 0 2 1242 2222 138 108 0 chr13 86203318 86203716 -34080596 + BGLII_B LTR ERVK 1 441 0 2 1242 424 325 106 0 chr13 86203753 86203941 -34080371 + ID_B1 SINE B4 2 209 -15 2 1242 440 290 27 33 chr13 86204689 86204839 -34079473 + B1F SINE Alu 1 149 0 2 1242 728 59 20 0 chr13 86205204 86205305 -34079007 + (TTTC)n Simple_repeat Simple_repeat 2 104 0 2 1242 475 16 31 0 chr13 86205308 86205372 -34078940 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1242 651 276 84 26 chr13 86205617 86205807 -34078505 + B3 SINE B2 8 208 -8 2 1242 1427 281 61 120 chr13 86207274 86208126 -34076186 + RLTR22_Mur LTR ERVK 1 802 -1046 2 1242 540 267 291 0 chr13 86208098 86208349 -34075963 + RLTR22_Mur LTR ERVK 974 1297 -551 2 1242 1704 217 56 63 chr13 86208411 86208437 -34075875 - Lx6 LINE L1 -672 6788 6740 2 1242 396 0 0 0 chr13 86208437 86208481 -34075831 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2 1242 1704 217 56 63 chr13 86208481 86208881 -34075431 - Lx6 LINE L1 -721 6739 6366 2 1242 305 157 0 0 chr13 86208880 86208931 -34075381 + L1_Mur3 LINE L1 4981 5031 -849 2 1242 439 324 74 0 chr13 86208933 86209109 -34075203 - ID_B1 SINE B4 -1 223 35 2 1242 1119 205 246 15 chr13 86209720 86210062 -34074250 + MTC LTR MaLR 1 421 0 2 1242 27 49 0 0 chr13 86210242 86210283 -34074029 + AT_rich Low_complexity Low_complexity 1 41 0 2 1242 571 255 28 0 chr13 86211640 86211785 -34072527 - B1_Mur2 SINE Alu 0 149 1 2 1242 676 95 17 0 chr13 86211794 86211931 -34072381 - L1_Mus3 LINE L1 0 6638 6511 2 1242 270 0 0 0 chr13 86212506 86212536 -34071776 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1242 2609 191 72 10 chr13 86212593 86213174 -34071138 - L1Md_F LINE L1 -5544 975 390 2 1242 4847 146 72 16 chr13 86213160 86214573 -34069739 - L1VL1 LINE L1 -2184 1514 10 2 1242 304 113 16 31 chr13 86215806 86215870 -34068442 + GA-rich Low_complexity Low_complexity 2 64 0 2 1242 376 346 38 38 chr13 86215997 86216264 -34068048 - MLT1C LTR MaLR -2 465 199 2 1242 241 344 78 18 chr13 86216231 86216397 -34067915 - MLT1C LTR MaLR -137 253 78 2 1242 22 0 0 0 chr13 86216514 86216536 -34067776 + AT_rich Low_complexity Low_complexity 1 22 0 2 1242 3985 213 76 63 chr13 86218414 86219969 -34064343 - Lx5 LINE L1 -128 6922 5358 2 1242 1445 80 14 27 chr13 86219969 86220188 -34064124 - L1_Mus2 LINE L1 0 6566 6351 2 1242 3562 182 51 58 chr13 86220188 86220481 -34063831 - Lx5 LINE L1 -523 5357 5048 2 1242 6412 210 58 11 chr13 86220460 86222077 -34062235 - Lx5 LINE L1 -1977 3900 2207 2 1242 512 205 0 90 chr13 86222086 86222252 -34062060 - Lx5 LINE L1 -3813 2064 1914 2 1242 531 132 0 0 chr13 86222596 86222687 -34061625 + (TCTA)n Simple_repeat Simple_repeat 2 92 0 2 1242 21 36 0 0 chr13 86222936 86222964 -34061348 + AT_rich Low_complexity Low_complexity 1 28 0 2 1242 723 270 53 56 chr13 86223107 86223448 -34060864 - Lx7 LINE L1 -1 7695 7356 2 1242 1041 197 23 5 chr13 86223560 86223774 -34060538 + URR1B DNA MER1_type 8 225 0 3 1242 2439 82 12 3 chr13 86223878 86224222 -34060090 - L1_Mur1 LINE L1 -3345 2541 2195 3 1242 5456 135 22 12 chr13 86224224 86225149 -34059163 + Lx3_Mus LINE L1 6075 7008 -1 3 1242 590 278 54 49 chr13 86225223 86225427 -34058885 - Lx8 LINE L1 -932 6541 6337 3 1242 22241 137 18 7 chr13 86225633 86229437 -34054875 - L1_Mm LINE L1 -680 5203 1357 3 1242 1287 35 0 23 chr13 86229437 86229613 -34054699 + (TTTC)n Simple_repeat Simple_repeat 4 175 0 3 1242 645 125 25 0 chr13 86229624 86229744 -34054568 + (CCCCCT)n Simple_repeat Simple_repeat 1 123 0 3 1242 200 118 0 29 chr13 86229744 86229764 -34054548 + (TTC)n Simple_repeat Simple_repeat 1 20 0 3 1242 941 137 0 7 chr13 86229764 86229911 -34054401 - B1_Mus1 SINE Alu -2 146 1 3 1242 200 118 0 29 chr13 86229911 86229925 -34054387 + (TTC)n Simple_repeat Simple_repeat 2 15 0 3 1242 2932 220 61 29 chr13 86229926 86230742 -34053570 - L1VL4 LINE L1 -5313 989 148 3 1242 385 296 30 48 chr13 86231299 86231466 -34052846 - RNLTR23 LTR ERVK 0 642 479 3 1242 433 286 27 0 chr13 86232700 86232812 -34051500 - PB1D7 SINE Alu 0 120 6 3 1242 32 0 0 0 chr13 86232977 86233009 -34051303 + AT_rich Low_complexity Low_complexity 1 32 0 3 1242 21 36 0 0 chr13 86233265 86233293 -34051019 + AT_rich Low_complexity Low_complexity 1 28 0 3 1242 3740 188 78 13 chr13 86233319 86234078 -34050234 - Lx2B LINE L1 -10 6990 6183 3 1242 4085 118 5 11 chr13 86234076 86234463 -34049849 - Lx2B LINE L1 -1071 5929 5573 3 1242 288 70 0 0 chr13 86234463 86234506 -34049806 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1242 1179 61 0 7 chr13 86234513 86234661 -34049651 - B1_Mus2 SINE Alu 0 147 1 3 1242 4085 173 18 55 chr13 86234661 86235166 -34049146 - Lx2B LINE L1 -305 5572 5055 3 1242 327 319 69 38 chr13 86235261 86235522 -34048790 - L1M5 LINE L1 -623 5539 5271 3 1242 1125 108 0 0 chr13 86235857 86236005 -34048307 + B1_Mus1 SINE Alu 1 148 0 3 1242 197 59 0 56 chr13 86236005 86236041 -34048271 + (CAAAAA)n Simple_repeat Simple_repeat 6 39 0 3 1242 415 293 6 6 chr13 86236082 86236240 -34048072 - Lx2B LINE L1 -1048 4832 4675 3 1242 227 280 19 74 chr13 86236428 86236536 -34047776 - L1_Rod LINE L1 -2447 3400 3299 3 1242 308 283 11 34 chr13 86236539 86236679 -34047633 + MT2B LTR ERVL 1 132 -343 3 1242 588 265 56 51 chr13 86236669 86236884 -34047428 + MT2B LTR ERVL 262 477 -124 3 1242 523 231 58 22 chr13 86236952 86237089 -34047223 - ORR1C2 LTR MaLR -50 334 193 3 1242 896 118 0 13 chr13 86237117 86237272 -34047040 + (GGGAGA)n Simple_repeat Simple_repeat 6 158 0 3 1242 289 264 154 12 chr13 86237433 86237602 -34046710 - ETnERV2-int LTR ERVK -981 6425 6233 3 1242 472 226 0 50 chr13 86237678 86237799 -34046513 - ETnERV2-int LTR ERVK -1195 6211 6097 3 1242 11461 160 47 25 chr13 86237811 86239082 -34045230 - RMER16-int LTR ERVK -1234 4172 2867 3 1242 246 62 0 0 chr13 86239082 86239114 -34045198 + (TA)n Simple_repeat Simple_repeat 2 33 0 3 1242 11461 160 47 25 chr13 86239114 86240064 -34044248 - RMER16-int LTR ERVK -2540 2866 1905 3 1242 8096 161 43 66 chr13 86240068 86241848 -34042464 - ETnERV2-int LTR ERVK -4594 2812 1075 3 1242 249 33 0 0 chr13 86241848 86241878 -34042434 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1242 25 31 0 0 chr13 86241935 86241967 -34042345 + AT_rich Low_complexity Low_complexity 1 32 0 3 1242 1825 169 15 72 chr13 86242276 86242666 -34041646 - RLTR9A LTR ERVK 0 368 1 3 1242 893 295 12 0 chr13 86242666 86242907 -34041405 - ORR1C2-int LTR MaLR -1122 248 5 3 1242 855 223 22 72 chr13 86242911 86243133 -34041179 - ORR1C2 LTR MaLR 0 384 174 3 1242 553 239 59 103 chr13 86243165 86243436 -34040876 - ORR1D1 LTR MaLR -115 259 1 3 1242 286 286 125 29 chr13 86243436 86243749 -34040563 - L1M2a LINE L1 -2835 4329 3987 3 1242 4763 24 0 0 chr13 86243749 86244298 -34040014 + MERVL-int LTR ERVL 4823 5371 -114 3 1242 371 111 26 53 chr13 86244298 86244374 -34039938 + ORR1A3-int LTR MaLR 567 640 -1323 3 1242 303 26 0 0 chr13 86244374 86244412 -34039900 + MERVL-int LTR ERVL 5448 5485 0 3 1242 1846 9 0 0 chr13 86244412 86244627 -34039685 + MT2_Mm LTR ERVL 1 215 -278 3 1242 551 333 94 23 chr13 86244710 86245229 -34039083 - L1M2a LINE L1 -3318 3846 3291 3 155 1948 208 40 5 chr13 86245244 86245649 -34038663 - MTC LTR MaLR -2 419 1 3 1243 11392 171 177 21 chr13 86246026 86249929 -34034383 - Lx LINE L1 -5 6649 2072 3 1243 5009 154 41 7 chr13 86249945 86251002 -34033310 - L1VL2 LINE L1 -2460 1155 57 3 1243 1236 206 50 7 chr13 86251684 86251963 -34032349 - L1VL2 LINE L1 -5980 355 65 3 1243 6407 124 38 9 chr13 86251999 86253368 -34030944 - L1_Mus3 LINE L1 0 6638 5229 3 1243 6971 150 4 1 chr13 86253367 86254512 -34029800 + L1_Mus3 LINE L1 4057 5205 -678 3 1243 1042 64 50 0 chr13 86254752 86254892 -34029420 - B1_Mm SINE Alu 0 147 1 3 1243 330 322 44 4 chr13 86255150 86255378 -34028934 - L1M2a LINE L1 -4960 2208 1972 3 1243 237 339 45 52 chr13 86255451 86255585 -34028727 - RSINE1 SINE B4 -6 159 27 3 1243 371 284 61 56 chr13 86256113 86256326 -34027986 - L1MDa LINE L1 -4672 1961 1748 3 1243 1352 35 23 11 chr13 86256430 86256594 -34027718 + L1Md_F2 LINE L1 5794 5961 -621 3 1243 2748 52 0 6 chr13 86256594 86256944 -34027368 + L1Md_F2 LINE L1 6233 6580 -2 3 1243 556 213 117 74 chr13 86257010 86257172 -34027140 - MTEa LTR MaLR -5 374 206 3 1243 414 266 109 0 chr13 86257193 86257321 -34026991 - MTEa LTR MaLR -211 168 27 3 1243 1629 21 0 11 chr13 86257403 86257594 -34026718 - B2_Mm1a SINE B2 -3 190 2 3 1243 2342 78 106 3 chr13 86258536 86258884 -34025428 - L1_Mus2 LINE L1 0 6567 6184 3 1243 2677 60 14 3 chr13 86258894 86259242 -34025070 + L1_Mus2 LINE L1 5758 6109 -458 3 1243 1182 111 6 0 chr13 86260476 86260647 -34023665 - L1_Mus2 LINE L1 -381 6185 6014 3 1243 801 115 16 0 chr13 86260647 86260769 -34023543 - B2_Mm2 SINE B2 -53 142 19 3 1243 3330 58 2 0 chr13 86260769 86261327 -34022985 - L1_Mus2 LINE L1 -561 6005 5447 3 1243 39958 18 1 6 chr13 86261322 86267504 -34016808 - L1Md_A LINE L1 -1 6581 441 3 1243 2435 89 3 0 chr13 86267502 86267849 -34016463 - L1_Mus2 LINE L1 -419 5464 5117 3 1243 2677 110 0 0 chr13 86267849 86268231 -34016081 + L1_Mus2 LINE L1 6184 6565 -1 3 1243 55 40 0 0 chr13 86268231 86268307 -34016005 + AT_rich Low_complexity Low_complexity 1 76 0 3 1243 410 257 142 100 chr13 86268763 86268953 -34015359 - B3A SINE B2 0 198 1 3 1243 23 0 0 0 chr13 86269076 86269099 -34015213 + AT_rich Low_complexity Low_complexity 1 23 0 3 1243 1112 68 0 52 chr13 86269186 86269341 -34014971 - B1_Mus2 SINE Alu 0 147 1 3 1243 540 297 124 0 chr13 86270217 86270402 -34013910 - B3 SINE B2 -5 211 4 3 1243 22910 171 19 13 chr13 86271098 86276837 -34007475 + L1_Mus4 LINE L1 552 6327 -309 3 1243 234 240 0 39 chr13 86276995 86277047 -34007265 + MTC LTR MaLR 109 158 -226 3 1243 34 0 0 0 chr13 86277112 86277146 -34007166 + AT_rich Low_complexity Low_complexity 1 34 0 3 1243 2858 306 76 38 chr13 86277305 86278959 -34005353 - Lx7 LINE L1 -394 7302 5587 3 1243 278 284 148 10 chr13 86278955 86279158 -34005154 - Lx7 LINE L1 -615 5265 5035 3 1243 2537 248 72 26 chr13 86279162 86280089 -34004223 + L1_Mur3 LINE L1 3616 4585 -1295 3 1243 7055 70 38 0 chr13 86280097 86281164 -34003148 - L1_Mus1 LINE L1 -2 6565 5468 3 1243 415 88 73 0 chr13 86281162 86281230 -34003082 + L1_Mus1 LINE L1 5925 5997 -570 3 1243 28 48 0 0 chr13 86281857 86281899 -34002413 + AT_rich Low_complexity Low_complexity 1 42 0 3 1243 360 344 0 23 chr13 86282433 86282564 -34001748 + MIR SINE MIR 59 186 -76 3 1243 1203 171 14 0 chr13 86283147 86283357 -34000955 + MTC LTR MaLR 1 213 -208 3 1243 724 44 0 0 chr13 86283357 86283447 -34000865 - L1Md_T LINE L1 -357 6225 6136 3 1243 1228 230 0 34 chr13 86283447 86283484 -34000828 + MTC LTR MaLR 160 195 -226 3 1243 2824 44 16 11 chr13 86283484 86283851 -34000461 + L1Md_F3 LINE L1 6216 6584 0 3 1243 1228 230 0 34 chr13 86283851 86284079 -34000233 + MTC LTR MaLR 196 416 -5 3 1243 450 0 0 0 chr13 86284164 86284214 -34000098 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1243 246 174 0 0 chr13 86284214 86284260 -34000052 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1243 23 0 0 0 chr13 86284365 86284388 -33999924 + AT_rich Low_complexity Low_complexity 1 23 0 3 1243 4564 166 14 16 chr13 86284473 86285300 -33999012 + Lx4A LINE L1 6149 6974 -84 3 1243 1108 69 7 0 chr13 86286160 86286304 -33998008 + B1_Mm SINE Alu 3 147 0 3 1243 316 97 69 0 chr13 86286306 86286378 -33997934 + A-rich Low_complexity Low_complexity 3 79 0 3 1243 405 0 0 0 chr13 86287564 86287609 -33996703 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1243 310 115 16 16 chr13 86287609 86287671 -33996641 + (GGGAGA)n Simple_repeat Simple_repeat 5 66 0 3 1243 3012 179 9 20 chr13 86287986 86288533 -33995779 - RLTR20A LTR ERVK 0 541 1 3 1243 202 276 0 11 chr13 86288941 86289029 -33995283 + T-rich Low_complexity Low_complexity 1 87 0 3 1243 290 323 30 0 chr13 86289061 86289160 -33995152 - Lx8 LINE L1 -237 7236 7135 3 1243 6577 25 0 0 chr13 86289187 86290042 -33994270 + L1Md_T LINE L1 5539 6393 -189 3 1243 1238 20 0 7 chr13 86290034 86290186 -33994126 + L1Md_T LINE L1 5435 5585 -298 3 1243 8506 30 1 0 chr13 86290187 86291182 -33993130 + L1Md_T LINE L1 5587 6582 0 3 1243 1613 40 0 0 chr13 86291180 86291382 -33992930 + L1Md_T LINE L1 6381 6582 0 3 1243 352 256 22 22 chr13 86291402 86291538 -33992774 + Lx3_Mus LINE L1 232 367 -6617 3 1243 28742 112 23 8 chr13 86291620 86295531 -33988781 + Lx3_Mus LINE L1 676 4658 -1228 3 1243 1432 70 0 5 chr13 86295531 86295718 -33988594 - B2_Mm2 SINE B2 -8 187 2 3 1243 28742 97 33 7 chr13 86295718 86297222 -33987090 + Lx3_Mus LINE L1 4659 6188 -821 3 1243 1623 258 100 58 chr13 86297224 86297874 -33986438 - Lx6 LINE L1 -15 7445 6769 3 1243 240 167 0 0 chr13 86299257 86299299 -33985013 + B3 SINE B2 1 42 -174 3 1243 628 325 0 28 chr13 86299333 86299580 -33984732 - MMERGLN-int LTR ERV1 -2568 4988 4749 3 1243 2156 124 137 0 chr13 86299850 86300245 -33984067 + RLTR47_MM LTR ERV1 1 449 -83 3 1243 392 143 247 12 chr13 86300255 86300340 -33983972 + B2_Mm2 SINE B2 27 131 -64 3 1243 1182 311 39 64 chr13 86300358 86300891 -33983421 - Lx6 LINE L1 -16 7444 6925 3 1243 232 242 0 0 chr13 86302016 86302046 -33982266 + A-rich Low_complexity Low_complexity 2 31 0 3 1243 1130 96 0 0 chr13 86302046 86302192 -33982120 + B1_Mm SINE Alu 1 146 -1 3 1243 232 242 0 0 chr13 86302192 86302223 -33982089 + A-rich Low_complexity Low_complexity 32 62 0 3 1243 1987 111 3 41 chr13 86303588 86303907 -33980405 - L1Md_F2 LINE L1 -13 6569 6263 3 1243 8989 81 2 0 chr13 86303907 86305192 -33979120 - L1_Mm LINE L1 -2450 3433 2146 3 1243 36448 52 6 8 chr13 86305187 86311474 -33972838 - L1Md_T LINE L1 0 6582 308 3 1243 6207 103 24 10 chr13 86311461 86313219 -33971093 - L1Md_T LINE L1 -3709 2174 392 3 1243 230 143 0 51 chr13 86313837 86313868 -33970444 + T-rich Low_complexity Low_complexity 26 56 0 3 1243 1110 76 7 0 chr13 86313868 86314013 -33970299 - B1_Mus2 SINE Alu 0 147 2 3 1243 230 143 0 51 chr13 86314013 86314040 -33970272 + T-rich Low_complexity Low_complexity 1 25 0 3 1243 480 120 0 29 chr13 86315367 86315470 -33968842 + (TCTA)n Simple_repeat Simple_repeat 1 100 0 4 1243 566 110 0 20 chr13 86315795 86315897 -33968415 + (TCTCCC)n Simple_repeat Simple_repeat 4 103 0 4 1243 1030 80 7 0 chr13 86316204 86316341 -33967971 + B1_Mm SINE Alu 1 138 -9 4 1243 189 74 0 0 chr13 86316341 86316368 -33967944 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1243 186 43 0 0 chr13 86316373 86316396 -33967916 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1243 921 127 125 12 chr13 86316529 86316697 -33967615 - Lx3B LINE L1 -2 6971 6785 4 1243 556 350 58 65 chr13 86316799 86317417 -33966895 - Lx7 LINE L1 -383 7313 6700 4 1243 306 330 17 9 chr13 86317426 86317542 -33966770 - Lx8 LINE L1 -872 6601 6485 4 1243 296 264 66 0 chr13 86317744 86317835 -33966477 - MER3 DNA MER1_type 0 209 113 4 1243 224 232 0 0 chr13 86318316 86318372 -33965940 + T-rich Low_complexity Low_complexity 1 56 0 4 1243 722 268 50 0 chr13 86318374 86318478 -33965834 - Lx6 LINE L1 -31 7429 7320 4 1243 212 0 0 35 chr13 86318478 86318507 -33965805 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1243 722 268 50 0 chr13 86318507 86318641 -33965671 - Lx6 LINE L1 -141 7319 7180 4 1243 583 36 12 12 chr13 86318653 86318736 -33965576 + (CA)n Simple_repeat Simple_repeat 1 83 0 4 1243 237 33 0 0 chr13 86318954 86318984 -33965328 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1243 504 0 0 0 chr13 86318992 86319048 -33965264 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 1243 473 348 42 18 chr13 86319059 86319226 -33965086 + B4A SINE B4 104 274 -18 4 1243 204 262 16 0 chr13 86319248 86319309 -33965003 + (TA)n Simple_repeat Simple_repeat 2 63 0 4 1243 827 211 78 0 chr13 86319392 86319596 -33964716 + Lx5 LINE L1 6831 7050 0 4 1243 5671 106 19 50 chr13 86319788 86320718 -33963594 - RLTR13D6 LTR ERVK 0 902 1 4 1243 5472 183 26 3 chr13 86320856 86321888 -33962424 + Lx4A LINE L1 6001 7056 -2 4 1243 254 29 0 28 chr13 86321888 86321924 -33962388 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1243 587 142 9 0 chr13 86322108 86322214 -33962098 + (TA)n Simple_repeat Simple_repeat 2 108 0 4 1243 34 24 0 0 chr13 86322658 86322699 -33961613 + AT_rich Low_complexity Low_complexity 1 41 0 4 1243 16830 71 7 2 chr13 86322702 86325799 -33958513 - L1Md_F2 LINE L1 0 6582 3533 4 1243 7539 58 4 0 chr13 86325793 86326849 -33957463 - L1Md_F2 LINE L1 -2 6580 5521 4 1243 1861 131 254 31 chr13 86326849 86327297 -33957015 - RLTR6_Mm LTR ERV1 -70 584 37 4 1243 52996 33 16 0 chr13 86327410 86335075 -33949237 - RLTR6-int LTR ERV1 0 7778 1 4 1243 1874 132 252 31 chr13 86335090 86335543 -33948769 - RLTR6_Mm LTR ERV1 -65 589 37 4 1243 32665 73 3 18 chr13 86335656 86340782 -33943530 - L1Md_F2 LINE L1 -359 5524 476 4 1243 15374 98 9 10 chr13 86340784 86340858 -33943454 - L1Md_F2 LINE L1 -2335 3548 3485 4 1243 230 0 33 0 chr13 86340858 86340888 -33943424 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1243 15374 105 20 14 chr13 86340888 86343865 -33940447 - L1Md_F2 LINE L1 -2399 3484 480 4 1243 317 157 0 0 chr13 86343865 86343916 -33940396 - L1VL1 LINE L1 -6348 74 24 4 1243 204 316 50 59 chr13 86344185 86344286 -33940026 - MIR SINE MIR -115 147 48 4 1243 199 229 66 0 chr13 86344632 86344693 -33939619 + L3 LINE CR1 865 929 -3560 4 1243 30 93 0 0 chr13 86345002 86345088 -33939224 + AT_rich Low_complexity Low_complexity 1 86 0 4 1243 223 263 17 34 chr13 86346595 86346654 -33937658 - MIR3 SINE MIR -47 161 104 4 1243 246 254 16 0 chr13 86346694 86346757 -33937555 - Lx7 LINE L1 -1794 5902 5839 4 1243 788 169 7 0 chr13 86346757 86346911 -33937401 + CT-rich Low_complexity Low_complexity 3 157 0 4 1243 1951 186 11 17 chr13 86346913 86347264 -33937048 - ORR1B1 LTR MaLR 0 394 46 4 1243 322 363 11 0 chr13 86347283 86347374 -33936938 - PB1D7 SINE Alu -15 105 14 4 1243 1302 211 47 71 chr13 86347408 86347816 -33936496 + Lx9 LINE L1 7247 7644 0 4 1243 4259 69 4 0 chr13 86347851 86348400 -33935912 + L1_Mus1 LINE L1 6017 6567 0 4 1243 291 322 11 0 chr13 86349724 86349814 -33934498 + (CA)n Simple_repeat Simple_repeat 2 92 0 4 1243 1571 211 2 144 chr13 86349859 86350275 -33934037 + ORR1B2 LTR MaLR 3 359 -8 4 1243 2298 284 88 34 chr13 86350782 86351687 -33932625 - Lx9 LINE L1 -230 7414 6461 4 1243 860 300 105 11 chr13 86352257 86352618 -33931694 + Lx7 LINE L1 7082 7476 -220 4 1243 236 248 0 33 chr13 86352736 86352812 -33931500 + GA-rich Low_complexity Low_complexity 1 73 0 4 1243 306 73 0 0 chr13 86353865 86353906 -33930406 + (TAA)n Simple_repeat Simple_repeat 2 42 0 4 1243 1931 146 21 80 chr13 86354097 86354470 -33929842 + ORR1B1 LTR MaLR 44 394 0 4 1243 1118 102 0 0 chr13 86354946 86355093 -33929219 + B1_Mus1 SINE Alu 2 148 0 4 1243 6614 155 34 4 chr13 86355357 86356486 -33927826 - Lx3C LINE L1 -9 6967 5806 4 1243 33 76 0 28 chr13 86357366 86357474 -33926838 + AT_rich Low_complexity Low_complexity 1 105 0 4 1243 522 345 87 4 chr13 86357633 86357863 -33926449 - ORR1D1 LTR MaLR -125 249 1 4 1243 2149 269 107 2 chr13 86357864 86358445 -33925867 - ORR1D1-int LTR MaLR -1 1369 728 4 1243 1487 273 11 97 chr13 86358434 86358888 -33925424 - ORR1D1-int LTR MaLR -954 416 2 4 1243 350 241 106 89 chr13 86358895 86358923 -33925389 - ORR1D1 LTR MaLR -5 365 342 4 1243 895 210 100 51 chr13 86358923 86359274 -33925038 - RLTR9A LTR ERVK 0 368 1 4 1243 350 241 106 89 chr13 86359274 86359368 -33924944 - ORR1D1 LTR MaLR -29 341 241 4 1243 426 275 41 40 chr13 86359405 86359567 -33924745 - ORR1D1 LTR MaLR -207 163 1 4 1243 1289 63 0 11 chr13 86359690 86359867 -33924445 + (GAAA)n Simple_repeat Simple_repeat 1 175 0 4 1243 212 224 25 20 chr13 86359961 86360030 -33924282 - MIRb SINE MIR -173 95 23 4 1243 22 0 0 0 chr13 86360339 86360361 -33923951 + AT_rich Low_complexity Low_complexity 1 22 0 4 1243 260 327 117 18 chr13 86361596 86361767 -33922545 + MIRb SINE MIR 14 201 -67 4 1243 2877 211 55 8 chr13 86361773 86362484 -33921828 + L1_Mus2 LINE L1 504 1240 -5846 4 1243 806 95 8 0 chr13 86362477 86362603 -33921709 + L1Md_F LINE L1 1008 1134 -5385 4 1243 35342 67 1 4 chr13 86362626 86368666 -33915646 - L1Md_F2 LINE L1 -1 6584 468 4 1243 15407 160 56 8 chr13 86368665 86372520 -33911792 + L1_Mus2 LINE L1 2508 6566 0 4 1243 238 26 25 25 chr13 86372937 86372977 -33911335 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 4 1243 256 328 22 66 chr13 86373187 86373324 -33910988 - B1_Mus2 SINE Alu -7 140 10 4 1243 24 0 0 0 chr13 86373491 86373515 -33910797 + AT_rich Low_complexity Low_complexity 1 24 0 4 1243 474 247 315 0 chr13 86373981 86374143 -33910169 + MTD LTR MaLR 107 319 -100 4 1243 1555 280 59 101 chr13 86374146 86374719 -33909593 - RMER15 LTR ERVL 0 575 27 4 1243 186 43 0 0 chr13 86375813 86375836 -33908476 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1243 1848 54 0 0 chr13 86375938 86376177 -33908135 - LTRIS2 LTR ERV1 0 564 326 4 1244 2589 118 2 35 chr13 86376477 86376900 -33907412 + RLTR9E LTR ERVK 1 409 0 4 1244 26 30 0 0 chr13 86378724 86378757 -33905555 + AT_rich Low_complexity Low_complexity 1 33 0 4 1244 411 328 0 15 chr13 86378757 86378887 -33905425 - B1F1 SINE Alu -21 128 1 4 1244 8515 148 16 9 chr13 86379436 86380574 -33903738 - Lx2 LINE L1 -1 6996 5844 4 1244 3669 185 14 21 chr13 86380574 86381271 -33903041 - RLTR17 LTR ERVK 0 692 1 4 1244 8515 148 16 9 chr13 86381271 86381532 -33902780 - Lx2 LINE L1 -1154 5843 5587 4 1244 475 317 53 61 chr13 86381990 86382235 -33902077 + B4A SINE B4 2 244 -48 4 1244 903 277 75 52 chr13 86382488 86382967 -33901345 + Lx7 LINE L1 7191 7681 -15 4 1244 1245 115 11 0 chr13 86382967 86383150 -33901162 + B2_Mm1t SINE B2 2 186 -7 4 1244 903 277 75 52 chr13 86383150 86383165 -33901147 + Lx7 LINE L1 7682 7696 0 4 1244 183 129 0 0 chr13 86383420 86383451 -33900861 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1244 216 184 0 0 chr13 86383452 86383501 -33900811 + GA-rich Low_complexity Low_complexity 2 50 0 4 1244 2020 83 0 0 chr13 86384133 86384409 -33899903 + L1_Mm LINE L1 2078 2353 -3530 4 1244 334 318 0 16 chr13 86384430 86384558 -33899754 + L1M5 LINE L1 5412 5537 -642 4 1244 891 104 12 62 chr13 86384573 86384772 -33899540 + B2_Mm2 SINE B2 14 188 -5 4 1244 266 361 0 0 chr13 86384881 86385011 -33899301 + L1MC LINE L1 5661 5790 -1995 4 1244 610 297 20 80 chr13 86385138 86385339 -33898973 - B3A SINE B2 -7 191 3 4 1244 1045 62 7 0 chr13 86385446 86385590 -33898722 + L1_Mus1 LINE L1 6423 6567 0 4 1244 3116 178 12 11 chr13 86385964 86386527 -33897785 - RLTR12A LTR ERVK -4 564 1 4 1244 333 0 0 0 chr13 86387378 86387415 -33896897 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 4 1244 486 0 0 0 chr13 86388612 86388666 -33895646 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 1244 423 0 0 0 chr13 86388666 86388712 -33895600 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1244 228 283 0 0 chr13 86388978 86389038 -33895274 + B4A SINE B4 195 254 -38 4 1244 474 18 0 0 chr13 86389079 86389134 -33895178 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1244 642 109 0 0 chr13 86389134 86389244 -33895068 + (GA)n Simple_repeat Simple_repeat 1 110 0 4 1244 400 239 25 49 chr13 86390623 86390786 -33893526 + Lx2B LINE L1 6836 6994 -6 4 1244 22 0 0 0 chr13 86390932 86390954 -33893358 + AT_rich Low_complexity Low_complexity 1 22 0 4 1244 461 382 61 18 chr13 86391019 86391248 -33893064 + Tigger5 DNA MER2_type 4 242 -2164 4 1244 23 54 0 0 chr13 86391588 86391625 -33892687 + AT_rich Low_complexity Low_complexity 1 37 0 4 1244 289 364 25 68 chr13 86392183 86392345 -33891967 + RSINE1 SINE B4 9 163 -2 4 1244 380 200 73 83 chr13 86393058 86393167 -33891145 - B3A SINE B2 -85 113 6 4 1244 360 311 38 12 chr13 86394153 86394337 -33889975 + Lx8 LINE L1 7125 7300 -396 4 1244 22 0 0 0 chr13 86394655 86394677 -33889635 + AT_rich Low_complexity Low_complexity 1 22 0 4 1244 180 0 0 0 chr13 86395375 86395395 -33888917 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 4 1244 1065 76 7 27 chr13 86395412 86395561 -33888751 - B1_Mm SINE Alu 0 147 2 4 1244 360 153 43 28 chr13 86395631 86395772 -33888540 + (TCTCTG)n Simple_repeat Simple_repeat 2 144 0 4 1244 7702 44 3 0 chr13 86395783 86396722 -33887590 - L1Md_A LINE L1 0 6582 5641 4 1244 6979 112 73 0 chr13 86396727 86397904 -33886408 - L1_Mus2 LINE L1 -1 6565 5303 5 1244 37845 52 27 3 chr13 86397907 86404237 -33880075 - L1Md_T LINE L1 0 6582 99 5 1244 2061 140 24 8 chr13 86404238 86404612 -33879700 - L1_Mus2 LINE L1 -581 5302 4923 5 1244 6844 118 6 10 chr13 86404606 86405662 -33878650 - L1_Mus2 LINE L1 -311 5572 4522 5 1244 6693 114 10 1 chr13 86405678 86406647 -33877665 + L1_Mus2 LINE L1 5588 6565 -1 5 1244 3764 120 28 0 chr13 86406656 86407238 -33877074 - L1_Mus2 LINE L1 -949 4934 4337 5 1244 201 86 57 0 chr13 86407239 86407274 -33877038 + (TCTA)n Simple_repeat Simple_repeat 1 37 0 5 1244 342 303 23 126 chr13 86407295 86407469 -33876843 - RSINE1 SINE B4 0 165 10 5 1244 451 254 169 27 chr13 86407712 86407931 -33876381 - Lx8 LINE L1 0 7473 7224 5 1244 745 367 41 19 chr13 86407995 86408409 -33875903 - Lx8 LINE L1 -351 7122 6700 5 1244 477 0 0 0 chr13 86408493 86408546 -33875766 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1244 459 0 0 0 chr13 86408546 86408596 -33875716 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1244 497 286 63 20 chr13 86408864 86409117 -33875195 - Lx7 LINE L1 -1826 5870 5607 5 1244 513 47 0 0 chr13 86409132 86409196 -33875116 + (TA)n Simple_repeat Simple_repeat 2 65 0 5 1244 447 19 0 0 chr13 86409227 86409279 -33875033 + (CA)n Simple_repeat Simple_repeat 2 53 0 5 1244 26 30 0 0 chr13 86409712 86409745 -33874567 + AT_rich Low_complexity Low_complexity 1 33 0 5 1244 21 71 0 0 chr13 86410287 86410329 -33873983 + AT_rich Low_complexity Low_complexity 1 42 0 5 1244 2512 118 0 3 chr13 86410530 86410911 -33873401 + L1_Mus4 LINE L1 6255 6634 -2 5 1244 855 337 88 33 chr13 86411170 86411965 -33872347 + L1_Rod LINE L1 1460 2283 -3564 5 1244 630 60 0 0 chr13 86411965 86412048 -33872264 + (GA)n Simple_repeat Simple_repeat 2 84 0 5 1244 855 337 88 33 chr13 86412048 86412273 -33872039 + L1_Rod LINE L1 2284 2535 -3312 5 1244 6774 118 36 1 chr13 86412333 86413509 -33870803 + L1_Mus4 LINE L1 5414 6629 -7 5 1244 3542 193 1 25 chr13 86413515 86414237 -33870075 - L1_Mm LINE L1 -715 5168 4464 5 1244 11932 88 25 50 chr13 86414237 86415480 -33868832 + RLTR22_Mus LTR ERVK 1 1282 -526 5 1244 198 0 0 0 chr13 86415480 86415502 -33868810 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 5 1244 11932 88 25 50 chr13 86415502 86416112 -33868200 + RLTR22_Mus LTR ERVK 1283 1808 0 5 1244 5046 162 114 11 chr13 86416118 86417220 -33867092 - L1_Mur2 LINE L1 -1422 4455 3240 5 1244 5369 83 34 4 chr13 86417230 86417975 -33866337 - L1_Mus1 LINE L1 0 6567 5801 5 1244 3156 96 0 0 chr13 86417977 86418424 -33865888 - L1_Mm LINE L1 -1233 4650 4204 5 1244 14053 10 0 0 chr13 86418434 86420030 -33864282 + L1_Mm LINE L1 4194 5789 -94 5 1244 870 154 0 0 chr13 86420241 86420390 -33863922 - L1_Mur2 LINE L1 -1669 4208 4060 5 1244 2397 94 0 0 chr13 86420386 86420726 -33863586 + L1_Mm LINE L1 4204 4543 -1340 5 1244 7186 18 0 6 chr13 86420726 86421561 -33862751 + L1Md_A LINE L1 5753 6582 0 5 1244 25 83 0 0 chr13 86422225 86422285 -33862027 + AT_rich Low_complexity Low_complexity 1 60 0 5 1244 226 0 0 114 chr13 86422337 86422381 -33861931 + (CAAAAA)n Simple_repeat Simple_repeat 1 39 0 5 1244 857 327 61 61 chr13 86422486 86423076 -33861236 - Lx8 LINE L1 -4 7469 6880 5 1244 587 325 95 46 chr13 86423088 86423439 -33860873 - Lx8 LINE L1 -884 6589 6215 5 1244 2258 75 122 11 chr13 86423439 86423790 -33860522 + RLTR10 LTR ERVK 1 390 0 5 1244 587 325 95 46 chr13 86423790 86424176 -33860136 - Lx8 LINE L1 -1259 6214 5816 5 1244 964 312 42 28 chr13 86424194 86424553 -33859759 - ORR1D2 LTR MaLR 0 370 7 5 1244 858 265 71 24 chr13 86424564 86424858 -33859454 - ORR1D2-int LTR MaLR -17 1353 1046 5 1244 271 267 0 0 chr13 86424862 86424922 -33859390 + (TG)n Simple_repeat Simple_repeat 1 60 0 5 1244 498 329 60 18 chr13 86425049 86425216 -33859096 - MTE-int LTR MaLR -406 1174 1001 5 1244 421 310 26 0 chr13 86425227 86425340 -33858972 - B1F1 SINE Alu -17 132 17 5 1244 237 159 0 0 chr13 86425895 86425939 -33858373 + GA-rich Low_complexity Low_complexity 3 46 0 5 1244 590 113 34 17 chr13 86425954 86426071 -33858241 + Lx2 LINE L1 6879 6997 0 5 1244 246 32 0 0 chr13 86426075 86426106 -33858206 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1244 297 0 0 0 chr13 86426306 86426339 -33857973 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1244 543 16 0 0 chr13 86426339 86426402 -33857910 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1244 441 206 0 27 chr13 86426555 86426665 -33857647 - Lx3C LINE L1 -2 6974 6868 5 1244 1425 201 60 0 chr13 86426675 86426959 -33857353 - L1_Mur2 LINE L1 -294 5583 5283 5 1244 339 65 0 0 chr13 86427493 86427539 -33856773 + (TC)n Simple_repeat Simple_repeat 2 47 0 5 1244 35063 49 1 4 chr13 86427665 86433167 -33851145 + L1Md_T LINE L1 11 5589 -297 5 1244 8333 33 0 0 chr13 86433168 86434151 -33850161 + L1Md_T LINE L1 5591 6573 -12 5 1244 22 35 0 0 chr13 86434663 86434692 -33849620 + AT_rich Low_complexity Low_complexity 1 29 0 5 1244 27 62 0 0 chr13 86434921 86434969 -33849343 + AT_rich Low_complexity Low_complexity 1 48 0 5 1244 26 0 0 0 chr13 86435425 86435451 -33848861 + AT_rich Low_complexity Low_complexity 1 26 0 5 1244 1045 243 86 4 chr13 86435584 86435852 -33848460 + ORR1B2 LTR MaLR 95 384 0 5 1244 7118 87 9 12 chr13 86435956 86437091 -33847221 - L1_Mus2 LINE L1 -1 6565 5435 5 1244 13240 29 1 0 chr13 86437102 86439353 -33844959 - L1Md_T LINE L1 -1 6581 4329 5 1244 38754 30 1 1 chr13 86439350 86445515 -33838797 - L1Md_T LINE L1 0 6582 459 5 1244 3071 277 64 57 chr13 86445515 86446832 -33837480 + ORR1B2-int LTR MaLR 109 1491 -18 5 1244 1159 247 44 67 chr13 86446850 86447210 -33837102 + ORR1B2 LTR MaLR 1 352 -15 5 1244 255 200 0 58 chr13 86447290 86447359 -33836953 + RLTR40 LTR ERVK 574 638 -179 5 1244 2366 157 41 75 chr13 86447425 86447563 -33836749 - L1_Mur2 LINE L1 -771 5106 4997 5 1244 1113 97 0 0 chr13 86447563 86447708 -33836604 - B1_Mus2 SINE Alu -2 145 1 5 1244 2366 157 41 75 chr13 86447708 86448106 -33836206 - L1_Mur2 LINE L1 -881 4996 4588 5 1244 4216 181 46 7 chr13 86448106 86448915 -33835397 + Lx4B LINE L1 6211 7050 -8 5 1244 240 59 0 0 chr13 86448974 86449008 -33835304 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1244 583 240 28 39 chr13 86449015 86449193 -33835119 - Lx7 LINE L1 -317 7379 7204 5 1244 3383 270 30 10 chr13 86449217 86450082 -33834230 - Lx7 LINE L1 -639 7057 6176 5 1244 1550 270 37 5 chr13 86450079 86450498 -33833814 - Lx7 LINE L1 -43 5804 5326 5 1244 333 284 11 0 chr13 86450511 86450599 -33833713 + RLTR40 LTR ERVK 729 817 0 5 1244 1118 314 47 17 chr13 86451072 86451416 -33832896 + MTD LTR MaLR 52 405 -14 5 1244 23 0 0 0 chr13 86451482 86451505 -33832807 + AT_rich Low_complexity Low_complexity 1 23 0 5 1244 2914 88 0 58 chr13 86452863 86453488 -33830824 - L1_Mm LINE L1 -706 5177 4627 5 1244 22 35 0 0 chr13 86453653 86453682 -33830630 + AT_rich Low_complexity Low_complexity 1 29 0 5 1244 1092 236 90 6 chr13 86453724 86454090 -33830222 + Lx9 LINE L1 7247 7643 -1 5 1244 399 113 0 0 chr13 86455136 86455198 -33829114 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 1244 1551 30 5 20 chr13 86456235 86456439 -33827873 - L1Md_F3 LINE L1 -14 6570 6370 5 1244 336 24 0 0 chr13 86456503 86456544 -33827768 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1244 474 18 0 0 chr13 86456669 86456724 -33827588 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 5 1244 364 395 0 8 chr13 86456984 86457114 -33827198 - ID_B1 SINE B4 -17 207 79 5 1244 16179 166 79 106 chr13 86457525 86460005 -33824307 + L1_Mus3 LINE L1 376 2889 -2994 5 1244 522 0 0 0 chr13 86460005 86460063 -33824249 + (GAAA)n Simple_repeat Simple_repeat 3 60 0 5 1244 16179 155 110 147 chr13 86460063 86462686 -33821626 + L1_Mus3 LINE L1 2890 5305 -578 5 1244 8303 39 0 0 chr13 86462686 86463681 -33820631 + L1Md_T LINE L1 5587 6581 -1 5 1244 16179 143 55 72 chr13 86463681 86464366 -33819946 + L1_Mus3 LINE L1 5306 5980 -658 5 1244 3245 44 3 0 chr13 86464366 86464750 -33819562 + IAPEY_LTR LTR ERVK 1 385 0 5 1244 6435 134 14 16 chr13 86464750 86465405 -33818907 + L1_Mus3 LINE L1 5981 6636 -2 5 1244 180 0 0 0 chr13 86466070 86466090 -33818222 + (CATTA)n Simple_repeat Simple_repeat 4 23 0 5 1244 48 18 0 0 chr13 86466105 86466160 -33818152 + AT_rich Low_complexity Low_complexity 1 55 0 5 1244 1230 100 5 0 chr13 86466368 86466588 -33817724 + (CA)n Simple_repeat Simple_repeat 1 220 0 5 1244 1631 123 58 4 chr13 86467352 86467629 -33816683 - L1_Mus3 LINE L1 0 6638 6347 5 1244 293 405 65 51 chr13 86467697 86468051 -33816261 + MLT1E1A LTR MaLR 205 563 -117 5 1244 23 0 0 0 chr13 86468828 86468851 -33815461 + AT_rich Low_complexity Low_complexity 1 23 0 5 1244 396 399 70 25 chr13 86470287 86470444 -33813868 + RSINE1 SINE B4 2 165 0 5 1244 333 156 0 0 chr13 86470451 86470528 -33813784 + (CA)n Simple_repeat Simple_repeat 2 78 0 5 1244 279 194 95 21 chr13 86470791 86470886 -33813426 - Lx9 LINE L1 -18 7626 7525 5 1244 1681 114 10 0 chr13 86471339 86471628 -33812684 + MusHAL1 LINE L1 56 347 -2365 5 1244 4582 99 0 0 chr13 86471621 86472265 -33812047 + L1_Mm LINE L1 2185 2828 -3055 5 1244 2665 277 35 1 chr13 86472272 86472977 -33811335 - Lx6 LINE L1 -771 6689 5961 5 1244 378 333 8 8 chr13 86472987 86473111 -33811201 - MTE2b LTR MaLR -45 334 211 5 1244 419 161 11 33 chr13 86473148 86473238 -33811074 + Lx9 LINE L1 7351 7438 -206 5 1244 23 54 0 0 chr13 86473848 86473885 -33810427 + AT_rich Low_complexity Low_complexity 1 37 0 5 1244 329 253 5 0 chr13 86474212 86474301 -33810011 - ORR1D1 LTR MaLR 0 384 293 5 1244 330 132 0 0 chr13 86474366 86474419 -33809893 + (GA)n Simple_repeat Simple_repeat 1 53 0 5 1244 693 251 27 54 chr13 86474419 86474653 -33809659 - ORR1D1 LTR MaLR -87 283 38 5 1244 1704 210 92 99 chr13 86474656 86475189 -33809123 + RMER19C LTR ERVK 5 533 -78 5 1244 261 163 0 0 chr13 86475191 86475234 -33809078 - ORR1D1 LTR MaLR -341 43 1 5 1244 513 218 24 2 chr13 86475215 86475351 -33808961 - ORR1D1-int LTR MaLR 0 1370 1251 5 1244 683 186 0 0 chr13 86475351 86475469 -33808843 - Lx6 LINE L1 -274 5603 5486 5 1244 2652 206 32 10 chr13 86475466 86476059 -33808253 + Lx5 LINE L1 5607 6212 -838 5 1244 1958 328 78 32 chr13 86476457 86477761 -33806551 - RodERV21-int LTR ERV1 -106 4885 3522 5 1244 574 326 34 81 chr13 86478183 86478593 -33805719 - RodERV21-int LTR ERV1 -1883 3108 2718 5 1244 319 269 72 42 chr13 86478791 86478993 -33805319 - MuLV-int LTR ERV1 -2633 4973 4889 5 1244 312 322 22 39 chr13 86480066 86480244 -33804068 - MuLV-int LTR ERV1 -3936 3670 3512 5 1244 444 330 59 46 chr13 86480502 86480962 -33803350 - RodERV21-int LTR ERV1 -3034 4057 3592 5 1244 1145 286 8 57 chr13 86481081 86481452 -33802860 - RodERV21-int LTR ERV1 -2273 2718 2366 5 1244 2555 304 48 70 chr13 86481450 86482668 -33801644 - RodERV21-int LTR ERV1 -3091 1900 709 5 1244 2544 248 18 10 chr13 86483611 86484267 -33800045 + Lx5 LINE L1 6209 6940 -110 5 1244 4988 113 20 26 chr13 86484267 86484961 -33799351 + RLTR22_Mur LTR ERVK 1 689 -1159 5 1244 2384 116 12 60 chr13 86484961 86485391 -33798921 + RLTR9E LTR ERVK 1 409 0 5 1244 4988 113 20 26 chr13 86485391 86485533 -33798779 + RLTR22_Mur LTR ERVK 690 832 -1016 5 1244 1138 302 43 26 chr13 86485824 86486242 -33798070 - Lx9 LINE L1 -454 7190 6766 5 1244 312 302 0 34 chr13 86486454 86486543 -33797769 + B4A SINE B4 136 221 -71 5 1244 314 355 0 0 chr13 86486752 86486893 -33797419 + (TG)n Simple_repeat Simple_repeat 2 142 0 5 1244 23 0 0 0 chr13 86487278 86487301 -33797011 + AT_rich Low_complexity Low_complexity 1 23 0 5 1244 3352 35 2 2 chr13 86487691 86488087 -33796225 - MTA_Mm LTR MaLR 0 396 1 6 1244 698 245 0 14 chr13 86488120 86488261 -33796051 + B1_Mur4 SINE Alu 10 148 -2 6 1244 185 122 0 47 chr13 86488263 86488306 -33796006 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 6 1244 62 26 0 0 chr13 86488404 86488480 -33795832 + AT_rich Low_complexity Low_complexity 1 76 0 6 1244 38464 5 1 0 chr13 86488965 86494544 -33789768 + L1Md_A LINE L1 7 5586 -297 6 1244 8970 5 0 0 chr13 86494544 86495540 -33788772 + L1Md_A LINE L1 5587 6582 0 6 1244 210 150 0 0 chr13 86496514 86496554 -33787758 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1244 508 202 0 10 chr13 86496674 86496774 -33787538 + Lx9 LINE L1 7313 7411 -233 6 1244 6222 146 26 4 chr13 86497264 86497378 -33786934 - Lx LINE L1 -7 6647 6534 6 1244 474 18 0 0 chr13 86497378 86497433 -33786879 + (CTCA)n Simple_repeat Simple_repeat 4 58 0 6 1244 6222 156 21 3 chr13 86497433 86498829 -33785483 - Lx LINE L1 -121 6533 5108 6 1244 519 344 14 18 chr13 86499286 86499508 -33784804 + ID_B1 SINE B4 1 221 -3 6 1244 972 155 0 0 chr13 86500860 86501028 -33783284 - L1_Mur2 LINE L1 -2178 3699 3532 1 1244 18994 105 18 31 chr13 86501024 86502083 -33782229 + L1_Mur2 LINE L1 2408 3469 -2417 1 1244 2626 45 3 3 chr13 86502083 86502419 -33781893 + L1Md_F2 LINE L1 6246 6581 -1 2 1244 18994 105 18 31 chr13 86502419 86504406 -33779906 + L1_Mur1 LINE L1 3470 5415 -471 1 1244 3299 28 0 2 chr13 86504399 86504794 -33779518 - L1Md_F3 LINE L1 -485 6099 5706 3 1244 4115 46 2 0 chr13 86504794 86505294 -33779018 + L1Md_F3 LINE L1 6073 6573 -11 3 1244 2903 101 2 0 chr13 86505296 86505692 -33778620 + L1_Mur1 LINE L1 5399 5795 -91 1 1244 3049 157 18 15 chr13 86505691 86506240 -33778072 + Lx2 LINE L1 6162 6712 -285 4 1244 284 242 108 54 chr13 86506240 86506406 -33777906 - RMER17C LTR ERVK -235 175 1 5 1244 315 264 21 42 chr13 86506423 86506518 -33777794 - RSINE1 SINE B4 -61 104 12 6 1244 1162 213 94 34 chr13 86506712 86507009 -33777303 - RLTR46 LTR ERVK -5 315 1 7 1245 274 370 14 35 chr13 86507564 86507707 -33776605 + ID_B1 SINE B4 76 215 -9 8 1245 432 235 0 0 chr13 86507776 86507891 -33776421 + (TA)n Simple_repeat Simple_repeat 1 115 0 9 1245 261 0 0 0 chr13 86508411 86508440 -33775872 + (TA)n Simple_repeat Simple_repeat 1 29 0 1 1245 3209 250 76 12 chr13 86509270 86510202 -33774110 - Lx2B LINE L1 0 7000 6009 1 1245 974 141 37 0 chr13 86510383 86510546 -33773766 - MT2B LTR ERVL -3 598 430 1 1245 827 106 0 24 chr13 86510547 86510673 -33773639 - MT2B LTR ERVL -478 123 1 1 1245 189 132 0 0 chr13 86511203 86511241 -33773071 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1245 222 255 27 9 chr13 86511597 86511708 -33772604 + (TAAA)n Simple_repeat Simple_repeat 1 113 0 1 1245 3251 95 2 80 chr13 86511958 86512473 -33771839 + MT2C_Mm LTR ERVL 1 475 0 1 1245 318 80 0 0 chr13 86512572 86512622 -33771690 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 1 1245 3120 264 32 10 chr13 86512853 86513780 -33770532 + Lx5 LINE L1 6051 7047 -3 1 1245 500 330 20 20 chr13 86514364 86514540 -33769772 + Lx6 LINE L1 7145 7322 -138 1 1245 472 248 48 41 chr13 86514540 86514687 -33769625 - B1_Mus1 SINE Alu 0 148 1 1 1245 500 330 20 20 chr13 86514687 86514705 -33769607 + Lx6 LINE L1 7323 7339 -121 1 1245 1140 180 24 10 chr13 86516202 86516410 -33767902 + ORR1A3 LTR MaLR 116 326 0 2 1245 3504 83 0 0 chr13 86516696 86517154 -33767158 + L1_Mus1 LINE L1 6110 6567 0 2 1245 1913 284 61 7 chr13 86517209 86517763 -33766549 - Lx5 LINE L1 0 7050 6467 2 1245 3347 119 2 16 chr13 86517814 86518316 -33765996 + Lx LINE L1 6064 6558 -96 2 1245 2976 188 67 38 chr13 86518317 86519176 -33765136 - RLTR13D1 LTR ERVK 0 855 1 2 1245 495 147 11 0 chr13 86519195 86519290 -33765022 + Lx2 LINE L1 6902 6997 0 2 1245 492 18 0 0 chr13 86519471 86519528 -33764784 + (TA)n Simple_repeat Simple_repeat 2 58 0 2 1245 670 251 38 22 chr13 86519614 86519797 -33764515 + Lx7 LINE L1 7069 7254 -442 2 1245 278 50 25 0 chr13 86519801 86519841 -33764471 + (TTTA)n Simple_repeat Simple_repeat 2 42 0 2 1245 3566 236 3 14 chr13 86520391 86521203 -33763109 - Lx5 LINE L1 -42 7016 6191 2 1245 350 311 32 8 chr13 86521286 86521409 -33762903 + RLTR25B LTR ERVK 898 1023 -5 3 1245 291 217 42 25 chr13 86521439 86521557 -33762755 - Lx7 LINE L1 -215 7481 7362 3 1245 353 75 19 0 chr13 86521562 86521615 -33762697 + (GAAA)n Simple_repeat Simple_repeat 1 54 0 3 1245 463 274 24 0 chr13 86521615 86521739 -33762573 - Lx7 LINE L1 -329 7367 7241 3 1245 1729 194 46 0 chr13 86521739 86521786 -33762526 + L1_Mur2 LINE L1 4845 4891 -986 3 1245 369 0 0 0 chr13 86521786 86521827 -33762485 + (TATG)n Simple_repeat Simple_repeat 2 42 0 3 1245 1729 194 46 0 chr13 86521827 86522125 -33762187 + L1_Mur2 LINE L1 4892 5205 -672 3 1245 230 219 0 0 chr13 86522127 86522168 -33762144 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1245 234 210 48 0 chr13 86522204 86522266 -33762046 + L1_Mur2 LINE L1 5233 5297 -583 3 1245 5849 179 94 10 chr13 86522256 86523396 -33760916 + Lx2 LINE L1 5762 6997 0 3 1245 2440 173 65 0 chr13 86523397 86523653 -33760659 + L1_Mur2 LINE L1 5284 5547 -330 3 1245 204 67 0 0 chr13 86523653 86523683 -33760629 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1245 2440 173 65 0 chr13 86523683 86523906 -33760406 + L1_Mur2 LINE L1 5548 5793 -84 3 1245 359 320 30 81 chr13 86523915 86524051 -33760261 - Charlie2b DNA MER1_type -1834 948 817 3 1245 1112 210 4 4 chr13 86524051 86524276 -33760036 - URR1A DNA MER1_type -1 225 1 3 1245 359 320 30 81 chr13 86524276 86524336 -33759976 - Charlie2b DNA MER1_type -1966 816 762 3 1245 24 67 0 0 chr13 86526374 86526419 -33757893 + AT_rich Low_complexity Low_complexity 1 45 0 4 1245 463 244 8 8 chr13 86526929 86527049 -33757263 - Lx7 LINE L1 0 7696 7577 4 1245 9407 224 51 44 chr13 86527051 86527826 -33756486 - L1_Mur3 LINE L1 -438 5442 4678 4 1245 1069 148 35 191 chr13 86527826 86528312 -33756000 - RMER17C LTR ERVK 0 410 1 4 1245 9407 224 51 44 chr13 86528312 86530559 -33753753 - L1_Mur3 LINE L1 -1203 4677 2399 4 1245 440 255 44 33 chr13 86530559 86530727 -33753585 + RLTR15 LTR ERVK 1 304 -264 4 1245 458 243 34 20 chr13 86530735 86530882 -33753430 - L1_Mur3 LINE L1 -6688 1040 892 4 1245 968 124 11 11 chr13 86530968 86531148 -33753164 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1245 330 167 0 0 chr13 86531150 86531210 -33753102 + CT-rich Low_complexity Low_complexity 3 62 0 4 1245 464 258 182 59 chr13 86531766 86532208 -33752104 + RMER19C LTR ERVK 23 587 -24 4 1245 486 0 0 0 chr13 86532429 86532483 -33751829 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1245 273 286 134 22 chr13 86532520 86532699 -33751613 - Lx9 LINE L1 -207 7437 7239 4 1245 892 341 66 18 chr13 86532825 86532897 -33751415 + Lx9 LINE L1 6399 6470 -1174 5 1245 209 33 33 0 chr13 86532897 86532927 -33751385 + (TA)n Simple_repeat Simple_repeat 1 31 0 5 1245 892 341 66 18 chr13 86532927 86533307 -33751005 + Lx9 LINE L1 6471 6873 -771 5 1245 40 49 0 0 chr13 86533519 86533580 -33750732 + AT_rich Low_complexity Low_complexity 1 61 0 5 1245 246 314 83 79 chr13 86533988 86534216 -33750096 + LTR16A1 LTR ERVL 181 409 -47 5 1245 5707 115 40 113 chr13 86534237 86535349 -33748963 + RLTR13D4 LTR ERVK 3 1033 0 5 1245 361 347 41 16 chr13 86535635 86535758 -33748554 - RSINE1 SINE B4 -28 137 12 5 1245 207 0 0 0 chr13 86535817 86535840 -33748472 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1245 378 236 0 92 chr13 86535868 86535966 -33748346 - Lx6 LINE L1 -466 6584 6506 5 1245 2071 247 32 16 chr13 86535993 86536737 -33747575 - Lx6 LINE L1 -701 6349 5548 5 1245 369 279 38 23 chr13 86536734 86536866 -33747446 + Lx6 LINE L1 7301 7434 -26 5 1245 25 65 0 0 chr13 86536866 86536912 -33747400 + AT_rich Low_complexity Low_complexity 1 46 0 5 1245 351 0 0 0 chr13 86536973 86537012 -33747300 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1245 1037 93 0 0 chr13 86537429 86537568 -33746744 + B1_Mus1 SINE Alu 2 140 -8 6 1245 395 15 29 43 chr13 86537568 86537638 -33746674 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 6 1245 192 111 0 0 chr13 86537645 86537681 -33746631 + (A)n Simple_repeat Simple_repeat 1 36 0 6 1245 790 123 8 8 chr13 86537688 86537819 -33746493 + L1_Mus2 LINE L1 6436 6566 0 6 1245 401 252 68 17 chr13 86538263 86538380 -33745932 + B3 SINE B2 85 207 -9 6 1245 200 183 33 16 chr13 86539034 86539095 -33745217 + T-rich Low_complexity Low_complexity 1 62 0 6 1245 1326 137 42 46 chr13 86539214 86539474 -33744838 - Lx LINE L1 -2 6652 6394 6 1245 1073 99 0 0 chr13 86539474 86539615 -33744697 - B1_Mus1 SINE Alu -6 142 2 6 1245 4070 133 39 5 chr13 86539911 86540545 -33743767 - Lx LINE L1 -267 6387 5732 6 1245 877 349 32 9 chr13 86540545 86540860 -33743452 + MTE2b LTR MaLR 15 336 -43 6 1245 239 317 95 9 chr13 86541417 86541522 -33742790 + MLT1A1 LTR MaLR 1 114 -294 7 1245 248 316 101 10 chr13 86541593 86541692 -33742620 + Lx5 LINE L1 6823 6952 -106 7 1245 243 0 0 0 chr13 86541768 86541795 -33742517 + (TTAA)n Simple_repeat Simple_repeat 3 29 0 7 1245 233 342 101 42 chr13 86541801 86541990 -33742322 + MTE2a LTR MaLR 167 366 -13 7 1245 187 300 49 12 chr13 86542152 86542233 -33742079 + MIR SINE MIR 68 151 -111 7 1245 652 238 52 151 chr13 86542311 86542583 -33741729 + ORR1D2 LTR MaLR 4 248 -126 7 1245 443 330 36 23 chr13 86542645 86542853 -33741459 + ORR1D2-int LTR MaLR 504 720 -650 7 1245 1319 221 37 3 chr13 86542845 86543144 -33741168 + ORR1D2-int LTR MaLR 1062 1370 0 7 1245 676 370 28 15 chr13 86543200 86543524 -33740788 + ORR1D2 LTR MaLR 43 370 0 7 1245 545 233 40 0 chr13 86543524 86543674 -33740638 - L1_Mur3 LINE L1 -1673 4207 4052 7 1245 235 323 78 8 chr13 86543704 86543832 -33740480 + L1M2 LINE L1 4735 4871 -1272 7 1245 1616 266 52 28 chr13 86543874 86544412 -33739900 + Lx7 LINE L1 6863 7413 -283 7 1245 288 0 0 0 chr13 86544468 86544500 -33739812 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1245 603 117 0 0 chr13 86544565 86544659 -33739653 + (GA)n Simple_repeat Simple_repeat 1 94 0 8 1245 1960 255 24 5 chr13 86544805 86545422 -33738890 - Lx4B LINE L1 -20 6980 6332 8 1245 2570 181 35 8 chr13 86545421 86545932 -33738380 - L1_Mur2 LINE L1 -233 5644 5120 8 1245 4364 179 14 74 chr13 86545918 86546380 -33737932 + L1_Mur2 LINE L1 4165 4621 -1256 8 1245 3290 33 8 0 chr13 86546380 86546773 -33737539 + MTA_Mm LTR MaLR 1 396 0 8 1245 4364 179 14 74 chr13 86546773 86547333 -33736979 + L1_Mur2 LINE L1 4622 5125 -752 8 1245 1277 266 26 20 chr13 86547333 86547675 -33736637 + ORR1D1 LTR MaLR 31 374 0 8 1245 363 281 104 42 chr13 86547675 86547935 -33736377 + L1_Mur3 LINE L1 4842 5117 -763 8 1245 1296 355 57 38 chr13 86547935 86548810 -33735502 + Lx8 LINE L1 6576 7467 -6 8 1245 770 182 48 27 chr13 86548850 86548997 -33735315 + B1_Mur4 SINE Alu 1 150 0 8 1245 737 230 19 98 chr13 86549055 86549320 -33734992 + Lx9 LINE L1 7294 7537 -107 8 1245 953 236 162 9 chr13 86549409 86549945 -33734367 + Lx9 LINE L1 7020 7637 -7 9 1245 879 80 0 0 chr13 86549993 86550131 -33734181 + (TTTTG)n Simple_repeat Simple_repeat 3 140 0 9 1245 1001 96 7 0 chr13 86550131 86550266 -33734046 - B1_Mus1 SINE Alu -12 136 1 9 1245 3194 47 22 0 chr13 86552040 86552442 -33731870 - IAPLTR2a LTR ERVK 0 411 1 9 1245 6865 40 4 11 chr13 86552444 86553279 -33731033 - IAPEz-int LTR ERVK -2 6479 5651 9 1245 2633 73 0 3 chr13 86553272 86553615 -33730697 - IAPEz-int LTR ERVK -4781 1700 1359 9 1245 3414 91 15 24 chr13 86553615 86554447 -33729865 - IAPEz-int LTR ERVK -5819 662 9 9 1245 3179 47 22 0 chr13 86554448 86554850 -33729462 - IAPLTR2a LTR ERVK 0 411 1 9 1245 417 95 0 0 chr13 86555105 86555168 -33729144 + (TG)n Simple_repeat Simple_repeat 2 64 0 9 1245 875 203 67 15 chr13 86555397 86555592 -33728720 + RMER4A LTR ERVK 182 386 -80 9 1245 186 208 0 0 chr13 86555592 86555640 -33728672 + C-rich Low_complexity Low_complexity 3 50 0 9 1245 476 168 39 131 chr13 86555640 86555770 -33728542 + RMER4A LTR ERVK 347 464 -2 9 1245 228 282 0 71 chr13 86555772 86555856 -33728456 + A-rich Low_complexity Low_complexity 3 80 0 9 1245 35 0 0 0 chr13 86556055 86556090 -33728222 + AT_rich Low_complexity Low_complexity 1 35 0 9 1245 22 56 0 0 chr13 86556202 86556238 -33728074 + AT_rich Low_complexity Low_complexity 1 36 0 9 1245 458 242 20 0 chr13 86556691 86556790 -33727522 + B1_Mur4 SINE Alu 44 144 -6 1 1245 3096 54 2 10 chr13 86556974 86557369 -33726943 + L1_Mus1 LINE L1 6175 6566 -1 1 1245 10633 94 10 8 chr13 86557806 86559492 -33724820 - L1VL4 LINE L1 -1094 2465 779 1 1245 2137 127 25 9 chr13 86559499 86559872 -33724440 + RLTR9E LTR ERVK 6 385 -18 1 1245 4295 156 39 13 chr13 86559980 86560732 -33723580 - L1VL2 LINE L1 -5500 835 65 1 1245 21 57 0 0 chr13 86560782 86560817 -33723495 + AT_rich Low_complexity Low_complexity 1 35 0 1 1245 395 187 194 9 chr13 86561514 86561622 -33722690 - Lx4A LINE L1 -4 7054 6927 1 1245 3809 181 116 24 chr13 86561935 86562695 -33721617 + RLTR22_Mur LTR ERVK 1 794 -1054 1 1245 639 39 0 0 chr13 86562695 86562773 -33721539 + (GA)n Simple_repeat Simple_repeat 1 78 0 1 1245 3809 181 116 24 chr13 86562773 86562958 -33721354 + RLTR22_Mur LTR ERVK 795 1032 -816 1 1245 787 228 100 17 chr13 86563112 86563353 -33720959 + RLTR22_Mur LTR ERVK 1588 1848 0 1 1245 508 340 24 49 chr13 86564858 86565105 -33719207 + MLT2D LTR ERVL 9 249 -165 1 1245 2702 98 29 24 chr13 86565105 86565396 -33718916 - BGLII LTR ERVK 0 421 141 1 1245 450 0 0 0 chr13 86565396 86565446 -33718866 + (TC)n Simple_repeat Simple_repeat 2 51 0 1 1245 2702 98 29 24 chr13 86565446 86565573 -33718739 - BGLII LTR ERVK -281 140 2 1 1245 489 186 0 0 chr13 86565781 86565910 -33718402 + (CA)n Simple_repeat Simple_repeat 2 130 0 1 1245 7999 46 1 1 chr13 86566226 86567353 -33716959 - L1Md_F2 LINE L1 -3 6579 5453 1 1245 13156 35 0 1 chr13 86567345 86568940 -33715372 + L1Md_F2 LINE L1 3859 5451 -432 1 1245 579 12 38 0 chr13 86569054 86569134 -33715178 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 1 1245 302 280 46 46 chr13 86569194 86569325 -33714987 - MLT2D LTR ERVL -238 176 46 1 1245 457 349 13 0 chr13 86569824 86569973 -33714339 - Lx5 LINE L1 -732 6318 6168 1 1245 303 243 0 0 chr13 86569979 86570049 -33714263 + Lx5 LINE L1 5692 5761 -1289 1 1245 1508 288 102 8 chr13 86570044 86570565 -33713747 + Lx6 LINE L1 6530 7099 -361 1 1245 1768 154 0 3 chr13 86570565 86570851 -33713461 + Lx LINE L1 6365 6649 -5 1 1245 330 106 0 0 chr13 86570877 86570924 -33713388 + ORR1B1 LTR MaLR 340 386 -8 1 1245 769 276 81 9 chr13 86570940 86571242 -33713070 + Lx3C LINE L1 6651 6991 -6 1 1245 899 329 70 40 chr13 86571359 86571985 -33712327 - Lx9 LINE L1 -183 7461 6817 1 1245 243 333 86 0 chr13 86572019 86572136 -33712176 + L2c LINE L2 3108 3234 -153 1 1245 428 190 35 12 chr13 86572478 86572563 -33711749 + Lx9 LINE L1 7073 7159 -485 1 1245 315 192 74 74 chr13 86572559 86572694 -33711618 - L1M2 LINE L1 -659 5641 5507 1 1245 737 311 75 69 chr13 86572791 86573167 -33711145 + MTEb LTR MaLR 2 379 0 1 1245 626 272 158 8 chr13 86574263 86574522 -33709790 + MTEb-int LTR MaLR 219 516 -1064 1 1245 2121 102 53 0 chr13 86574541 86574844 -33709468 + ORR1A2 LTR MaLR 1 319 -8 1 1245 1171 352 130 37 chr13 86574843 86575753 -33708559 + MTEb-int LTR MaLR 524 1561 -19 1 1245 562 376 84 23 chr13 86575771 86576117 -33708195 + MTEb LTR MaLR 1 367 -12 1 1245 1622 239 36 31 chr13 86576154 86576539 -33707773 - MTD LTR MaLR -7 412 26 1 1245 204 40 0 0 chr13 86576542 86576567 -33707745 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 1 1245 3718 262 93 10 chr13 86576924 86577971 -33706341 + Lx6 LINE L1 6318 7451 -9 1 1245 21 57 0 0 chr13 86578527 86578562 -33705750 + AT_rich Low_complexity Low_complexity 1 35 0 1 1245 22 56 0 0 chr13 86579062 86579098 -33705214 + AT_rich Low_complexity Low_complexity 1 36 0 1 1245 2225 161 112 20 chr13 86579230 86579685 -33704627 - Lx2B LINE L1 -1 6999 6503 1 1245 255 191 0 0 chr13 86579979 86580042 -33704270 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1245 360 123 0 0 chr13 86580045 86580118 -33704194 + (GA)n Simple_repeat Simple_repeat 2 74 0 1 1245 572 0 15 0 chr13 86581506 86581574 -33702738 + (TC)n Simple_repeat Simple_repeat 2 70 0 1 1245 25 0 0 0 chr13 86581699 86581724 -33702588 + AT_rich Low_complexity Low_complexity 1 25 0 1 1245 1283 214 11 63 chr13 86581739 86582024 -33702288 - ORR1B2 LTR MaLR -89 278 9 1 1245 585 0 0 0 chr13 86582602 86582667 -33701645 + (TC)n Simple_repeat Simple_repeat 1 65 0 1 1245 279 0 0 0 chr13 86582667 86582697 -33701615 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1245 8257 150 11 12 chr13 86582698 86584364 -33699948 - Lx3C LINE L1 -9 6967 5308 1 1245 342 323 75 25 chr13 86584485 86584644 -33699668 - B4A SINE B4 -19 273 107 1 1245 227 333 58 48 chr13 86585276 86585380 -33698932 + L1M3e LINE L1 221 325 -6705 1 1245 713 225 25 12 chr13 86585652 86585814 -33698498 + URR1A DNA MER1_type 56 219 -7 1 1245 435 243 109 43 chr13 86585993 86586204 -33698108 - RLTR12B LTR ERVK -301 227 3 1 1245 180 0 0 0 chr13 86586736 86586756 -33697556 + (TATG)n Simple_repeat Simple_repeat 4 23 0 1 1245 255 248 40 71 chr13 86586764 86586890 -33697422 - L1_Rod LINE L1 -3474 2373 2252 1 1245 1032 207 14 33 chr13 86586894 86587109 -33697203 - ORR1C2 LTR MaLR 0 384 174 1 1245 632 74 33 0 chr13 86587109 86587230 -33697082 + (GA)n Simple_repeat Simple_repeat 1 125 0 1 1245 668 253 67 22 chr13 86587234 86587499 -33696813 - ORR1C2 LTR MaLR -108 262 1 1 1245 225 0 0 0 chr13 86587640 86587665 -33696647 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1 1245 227 200 136 12 chr13 86587760 86587841 -33696471 - L1_Mur1 LINE L1 -4191 1695 1605 1 1245 479 112 12 0 chr13 86587889 86587969 -33696343 + (TTTC)n Simple_repeat Simple_repeat 4 84 0 1 1245 234 0 0 0 chr13 86587972 86587998 -33696314 + (ATTG)n Simple_repeat Simple_repeat 3 28 0 1 1245 210 37 0 0 chr13 86588036 86588063 -33696249 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 1 1245 893 231 88 107 chr13 86588247 86588582 -33695730 + RMER19C LTR ERVK 1 306 -431 1 1245 5072 11 0 0 chr13 86588582 86589155 -33695157 - L1Md_A LINE L1 0 6582 6010 1 1245 621 318 61 103 chr13 86589155 86589275 -33695037 + RMER19C LTR ERVK 307 436 -301 1 1245 526 279 36 26 chr13 86589659 86589854 -33694458 - RLTR16 LTR ERVK -323 245 31 1 1245 601 224 53 70 chr13 86589860 86590047 -33694265 + RMER19B LTR ERVK 642 825 -77 1 1245 885 254 70 67 chr13 86590071 86590459 -33693853 - Lx7 LINE L1 -1392 6304 5916 1 1245 3386 5 0 0 chr13 86590644 86591076 -33693236 + L1Md_T LINE L1 6201 6582 0 1 1245 1176 172 13 35 chr13 86591389 86591618 -33692694 - ORR1A4 LTR MaLR -8 321 98 1 1245 7128 85 16 8 chr13 86591716 86592809 -33691503 - L1_Mus1 LINE L1 0 6567 5467 1 1245 4353 111 8 0 chr13 86592809 86593261 -33691051 + L1_Mm LINE L1 4836 5287 -596 1 1245 4042 58 0 6 chr13 86593261 86593768 -33690544 + L1Md_F2 LINE L1 6066 6569 -13 1 1245 4353 111 8 0 chr13 86593768 86593954 -33690358 + L1_Mm LINE L1 5288 5477 -406 1 1245 253 270 102 24 chr13 86594109 86594276 -33690036 - Lx7 LINE L1 -1800 5896 5717 1 1245 275 228 18 0 chr13 86594304 86594361 -33689951 + L1_Mus4 LINE L1 6396 6453 -183 1 1245 453 294 57 81 chr13 86594346 86594894 -33689418 - Lx7 LINE L1 -760 5540 4972 1 1245 22 70 0 0 chr13 86595007 86595050 -33689262 + AT_rich Low_complexity Low_complexity 1 43 0 1 1245 21 0 0 0 chr13 86595085 86595106 -33689206 + AT_rich Low_complexity Low_complexity 1 21 0 1 1245 24 32 0 0 chr13 86595625 86595656 -33688656 + AT_rich Low_complexity Low_complexity 1 31 0 1 1245 242 318 20 7 chr13 86595689 86595838 -33688474 + (TA)n Simple_repeat Simple_repeat 1 151 0 1 1245 21 36 0 0 chr13 86595900 86595928 -33688384 + AT_rich Low_complexity Low_complexity 1 28 0 1 1245 1127 231 98 25 chr13 86595979 86596418 -33687894 + RLTR11A2 LTR ERVK 3 518 -9 1 1245 4019 158 60 34 chr13 86596611 86597483 -33686829 + RMER17A2 LTR ERVK 1 894 -12 1 1245 21 36 0 0 chr13 86597962 86597990 -33686322 + AT_rich Low_complexity Low_complexity 1 28 0 1 1245 22 35 0 0 chr13 86598232 86598261 -33686051 + AT_rich Low_complexity Low_complexity 1 29 0 1 1245 242 145 0 62 chr13 86598473 86598554 -33685758 - MT2A LTR ERVL 0 533 458 1 1245 1131 281 143 20 chr13 86598590 86599043 -33685269 - RLTR20B3 LTR ERVK -64 513 5 1 1245 1606 178 50 0 chr13 86599076 86599419 -33684893 - MYSERV16_I-int LTR ERVK -30 2296 1937 1 1245 7557 77 3 0 chr13 86599422 86600469 -33683843 - L1_Mus1 LINE L1 0 6654 5526 1 1245 1359 215 29 0 chr13 86600469 86600748 -33683564 - MYSERV16_I-int LTR ERVK -375 1951 1665 1 1245 501 97 0 0 chr13 86602314 86602386 -33681926 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 1 1245 825 148 0 0 chr13 86602387 86602529 -33681783 + (TCCA)n Simple_repeat Simple_repeat 3 144 0 1 1245 840 297 62 6 chr13 86602866 86603218 -33681094 - ORR1D1 LTR MaLR 0 374 3 1 1245 1393 258 165 14 chr13 86603421 86604170 -33680142 + L1_Rod LINE L1 862 1738 -4109 1 1245 441 0 0 0 chr13 86604170 86604219 -33680093 + (CTA)n Simple_repeat Simple_repeat 1 49 0 1 1245 1393 265 139 31 chr13 86604219 86604365 -33679947 + L1_Rod LINE L1 1739 1899 -3948 1 1245 639 0 0 0 chr13 86604365 86604436 -33679876 + (GAA)n Simple_repeat Simple_repeat 3 73 0 1 1245 1393 265 139 31 chr13 86604436 86604698 -33679614 + L1_Rod LINE L1 1900 2178 -3669 1 1245 418 252 8 80 chr13 86604700 86604825 -33679487 - MTC LTR MaLR -107 312 197 1 1245 873 260 6 45 chr13 86604850 86605086 -33679226 - MTC LTR MaLR -197 210 1 1 1245 1390 286 90 19 chr13 86605086 86605653 -33678659 + Lx9 LINE L1 6770 7376 -268 1 1245 3310 104 2 2 chr13 86605672 86606136 -33678176 + L1_Mus2 LINE L1 6103 6566 0 1 1245 225 0 0 0 chr13 86606242 86606267 -33678045 + (TG)n Simple_repeat Simple_repeat 2 26 0 1 1245 420 20 0 0 chr13 86606267 86606315 -33677997 + (TA)n Simple_repeat Simple_repeat 2 50 0 1 1245 257 256 0 43 chr13 86606326 86606420 -33677892 + Lx9 LINE L1 7539 7628 -16 1 1245 1670 170 75 157 chr13 86608402 86608885 -33675427 + RLTR41 LTR ERV1 2 444 -2 1 1245 720 296 39 15 chr13 86609834 86610040 -33674272 - B3 SINE B2 0 216 6 1 1245 272 260 80 38 chr13 86610046 86610258 -33674054 - L1M3 LINE L1 -2639 3501 3281 1 1245 245 297 68 0 chr13 86610265 86610339 -33673973 - PB1D7 SINE Alu -9 111 33 1 1245 6341 165 35 36 chr13 86610516 86611744 -33672568 - Lx2A LINE L1 0 7008 5782 1 1245 263 57 0 0 chr13 86611826 86611861 -33672451 - Lx2A LINE L1 -31 6977 6943 1 1245 269 198 257 0 chr13 86611898 86611999 -33672313 - Lx9 LINE L1 -150 7494 7368 1 1245 2123 239 29 11 chr13 86612000 86612525 -33671787 - Lx9 LINE L1 -234 7410 6877 1 1245 461 260 0 0 chr13 86612560 86612660 -33671652 + Lx9 LINE L1 6773 6872 -772 1 1245 513 0 0 0 chr13 86613032 86613089 -33671223 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 1245 28 0 0 0 chr13 86613171 86613199 -33671113 + AT_rich Low_complexity Low_complexity 1 28 0 2 1245 321 221 0 0 chr13 86613697 86613801 -33670511 + T-rich Low_complexity Low_complexity 1 104 0 2 1245 8463 144 15 5 chr13 86613803 86615691 -33668621 - Lx3A LINE L1 0 6981 5077 2 1245 201 74 0 0 chr13 86615691 86615718 -33668594 + (TATATG)n Simple_repeat Simple_repeat 1 27 0 2 1245 19154 125 95 6 chr13 86615752 86619889 -33664423 - L1_Mus2 LINE L1 -4 6562 2026 2 1245 1744 137 20 0 chr13 86619907 86620200 -33664112 + MusHAL1 LINE L1 539 837 -1875 2 1245 2683 126 0 8 chr13 86620196 86620595 -33663717 + L1_Mus2 LINE L1 6083 6478 -88 2 1245 22 56 0 0 chr13 86620737 86620773 -33663539 + AT_rich Low_complexity Low_complexity 1 36 0 2 1245 1989 273 36 30 chr13 86620818 86621480 -33662832 - Lx9 LINE L1 -215 7429 6764 2 1245 298 211 120 22 chr13 86621565 86621657 -33662655 + MTE2b LTR MaLR 1 101 -278 2 1245 580 327 127 30 chr13 86621698 86621966 -33662346 + MTE2b LTR MaLR 63 356 -23 2 1245 788 132 0 33 chr13 86622471 86622651 -33661661 + GA-rich Low_complexity Low_complexity 2 175 0 2 1245 268 352 63 32 chr13 86622706 86622832 -33661480 + ID_B1 SINE B4 78 207 -17 2 1245 29587 89 4 10 chr13 86622905 86625805 -33658507 - L1Md_F2 LINE L1 -13 6569 3703 2 1245 1199 135 14 0 chr13 86625805 86626012 -33658300 - L1Md_F2 LINE L1 0 6582 6373 2 1245 29587 95 6 14 chr13 86626012 86628184 -33656128 - L1Md_F2 LINE L1 -2181 3702 1534 2 1245 898 162 0 55 chr13 86628184 86628367 -33655945 + MYSERV6-int LTR ERVK 87 259 -8700 2 1245 9158 181 70 24 chr13 86628371 86630472 -33653840 + MYSERV6-int LTR ERVK 993 3189 -5770 2 1245 673 195 70 25 chr13 86630474 86630632 -33653680 + RMER6B LTR ERVK 54 218 -243 2 1245 537 237 15 15 chr13 86630674 86630807 -33653505 + RMER6B LTR ERVK 329 461 0 2 1245 731 234 93 23 chr13 86630807 86631021 -33653291 - Lx7 LINE L1 -304 7392 7164 2 1245 428 330 109 46 chr13 86631264 86631799 -33652513 - L1MB7 LINE L1 -275 5909 5336 2 1245 348 24 0 0 chr13 86632045 86632086 -33652226 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1245 261 0 0 0 chr13 86632086 86632114 -33652198 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 1245 301 328 30 50 chr13 86632176 86632375 -33651937 - Lx8 LINE L1 -1646 5827 5633 2 1245 1333 55 6 6 chr13 86632803 86632984 -33651328 - L1Md_A LINE L1 -12 6572 6392 2 1245 1445 44 27 0 chr13 86632984 86633167 -33651145 - L1Md_A LINE L1 -647 5935 5748 2 1245 458 103 0 14 chr13 86633147 86633216 -33651096 - L1_Mm LINE L1 -890 4993 4926 2 1245 225 279 36 79 chr13 86633216 86633356 -33650956 + MER72B LTR ERV1 280 413 -355 2 1245 462 36 0 0 chr13 86633622 86633678 -33650634 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1245 22 0 0 0 chr13 86633910 86633932 -33650380 + AT_rich Low_complexity Low_complexity 1 22 0 2 1245 2240 272 69 65 chr13 86634498 86635355 -33648957 - RMER13A LTR ERVK 0 860 1 2 1245 33 0 0 0 chr13 86635521 86635554 -33648758 + AT_rich Low_complexity Low_complexity 1 33 0 2 1245 30 27 0 0 chr13 86635759 86635796 -33648516 + AT_rich Low_complexity Low_complexity 1 37 0 2 1245 30373 136 60 0 chr13 86635807 86636665 -33647647 + L1Md_F2 LINE L1 347 1257 -4626 2 1245 183 42 0 0 chr13 86636665 86636689 -33647623 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 155 30373 90 9 5 chr13 86636689 86640999 -33643313 + L1Md_F2 LINE L1 1258 5584 -299 2 1246 7091 88 3 6 chr13 86641000 86641987 -33642325 + L1Md_F2 LINE L1 5588 6571 -11 2 1246 29749 38 14 18 chr13 86642121 86643771 -33640541 - L1Md_T LINE L1 0 6582 4915 2 1246 225 183 46 77 chr13 86643771 86643836 -33640476 + RMER20A LTR ERVK 186 248 -268 2 1246 29749 38 14 18 chr13 86643836 86646629 -33637683 - L1Md_T LINE L1 0 4914 2089 2 1246 16942 21 0 0 chr13 86646611 86648589 -33635723 + L1Md_T LINE L1 3609 5586 -297 2 1246 8876 10 0 0 chr13 86648589 86649585 -33634727 + L1Md_T LINE L1 5587 6582 0 2 1246 6686 65 0 10 chr13 86649593 86651358 -33632954 - L1Md_Gf LINE L1 -3764 2122 278 2 1246 23 0 0 0 chr13 86651739 86651762 -33632550 + AT_rich Low_complexity Low_complexity 1 23 0 2 1246 4009 265 22 18 chr13 86651767 86652806 -33631506 - Lx5 LINE L1 -39 7011 5969 2 1246 3757 185 13 6 chr13 86652803 86653533 -33630779 + Lx3C LINE L1 5158 5898 -1078 2 1246 1586 146 38 71 chr13 86653533 86653873 -33630439 + ORR1A4 LTR MaLR 1 329 0 2 1246 2360 296 78 66 chr13 86653873 86654322 -33629990 + Lx3C LINE L1 5899 6341 -635 2 1246 422 18 18 0 chr13 86654322 86654377 -33629935 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1246 2360 296 78 66 chr13 86654377 86654975 -33629337 + Lx3C LINE L1 6342 6963 -13 2 1246 297 0 0 0 chr13 86655018 86655051 -33629261 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1246 23 0 0 0 chr13 86655534 86655557 -33628755 + AT_rich Low_complexity Low_complexity 1 23 0 2 1246 296 335 124 53 chr13 86655624 86655946 -33628366 + RLTR11A2 LTR ERVK 1 345 -182 2 1246 23785 168 19 24 chr13 86655973 86661404 -33622908 - L1_Mus4 LINE L1 -642 5994 610 2 1246 2039 188 34 159 chr13 86661425 86661767 -33622545 + RMER6C LTR ERVK 51 347 -343 2 1246 271 0 51 0 chr13 86661767 86661806 -33622506 + (CAAAA)n Simple_repeat Simple_repeat 5 45 0 2 1246 2039 187 29 167 chr13 86661806 86662190 -33622122 + RMER6C LTR ERVK 348 688 -2 2 1246 343 384 38 21 chr13 86662466 86662703 -33621609 + B4 SINE B4 9 249 -43 2 1246 303 122 0 0 chr13 86662906 86662955 -33621357 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1246 741 224 52 10 chr13 86663245 86663439 -33620873 - RMER1B Other Other -3 1063 862 2 1246 1054 171 10 0 chr13 86663469 86663668 -33620644 - Lx3C LINE L1 -1046 5930 5730 2 1246 2060 298 9 17 chr13 86663677 86664340 -33619972 - RMER1B Other Other -210 856 145 2 1246 1281 315 28 44 chr13 86664341 86664889 -33619423 - RMER1B Other Other -558 508 30 2 1246 540 318 107 5 chr13 86665550 86665746 -33618566 - B3 SINE B2 0 216 1 2 1246 200 298 102 37 chr13 86666177 86666285 -33618027 + L3 LINE CR1 701 815 -3674 2 1246 249 214 0 0 chr13 86666435 86666491 -33617821 + T-rich Low_complexity Low_complexity 1 56 0 2 1246 1572 45 0 5 chr13 86666493 86666693 -33617619 - L1Md_F3 LINE L1 -16 6568 6370 2 1246 1309 278 161 25 chr13 86666911 86668127 -33616185 + L1_Mur3 LINE L1 4399 5799 -81 2 1246 541 264 33 8 chr13 86668131 86668253 -33616059 + B1_Mur3 SINE Alu 3 127 -22 2 1246 3762 33 4 0 chr13 86668253 86668706 -33615606 + L1Md_T LINE L1 6126 6580 -2 2 1246 32 26 0 0 chr13 86668706 86668745 -33615567 + AT_rich Low_complexity Low_complexity 1 39 0 2 1246 213 39 0 0 chr13 86668749 86668775 -33615537 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1246 1796 356 40 18 chr13 86668913 86669602 -33614710 + Lx7 LINE L1 6347 7056 -640 2 1246 1415 215 80 36 chr13 86669602 86669992 -33614320 - MTB_Mm LTR MaLR 0 407 1 2 1246 1796 356 40 18 chr13 86669992 86670214 -33614098 + Lx7 LINE L1 7057 7278 -418 2 1246 226 274 0 0 chr13 86670239 86670323 -33613989 + T-rich Low_complexity Low_complexity 1 84 0 2 1246 26 64 0 0 chr13 86670546 86670593 -33613719 + AT_rich Low_complexity Low_complexity 1 47 0 2 1246 240 35 0 0 chr13 86670673 86670702 -33613610 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 2 1246 269 26 26 0 chr13 86671886 86671924 -33612388 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1246 1073 72 0 0 chr13 86671924 86672062 -33612250 - B1_Mus1 SINE Alu -9 139 2 2 1246 21 0 0 0 chr13 86672180 86672201 -33612111 + AT_rich Low_complexity Low_complexity 1 21 0 2 1246 207 0 0 0 chr13 86673018 86673041 -33611271 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1246 26 0 0 0 chr13 86673202 86673228 -33611084 + AT_rich Low_complexity Low_complexity 1 26 0 2 1246 2168 145 231 2 chr13 86673364 86673776 -33610536 + L1_Mur2 LINE L1 4529 5034 -852 2 1246 769 191 0 58 chr13 86673793 86673965 -33610347 + L1_Mm LINE L1 5361 5522 -361 2 1246 12970 167 9 32 chr13 86673963 86677156 -33607156 - Lx LINE L1 -139 6515 3411 2 1246 957 118 14 0 chr13 86677156 86677300 -33607012 - B1_Mus2 SINE Alu 0 147 2 2 1246 12970 180 11 46 chr13 86677300 86677475 -33606837 - Lx LINE L1 -2473 3410 3237 2 1246 34804 54 0 8 chr13 86677842 86682901 -33601411 + L1Md_A LINE L1 571 5586 -297 2 1246 7866 60 2 2 chr13 86682901 86683897 -33600415 + L1Md_F2 LINE L1 5587 6582 0 2 1246 953 234 79 4 chr13 86684124 86684328 -33599984 + RLTR15 LTR ERVK 1 221 -138 2 1246 3924 35 4 0 chr13 86684328 86684792 -33599520 + L1Md_F3 LINE L1 6116 6581 -3 2 1246 953 234 79 4 chr13 86684792 86684840 -33599472 + RLTR15 LTR ERVK 222 270 -89 2 1246 891 106 15 0 chr13 86684840 86684972 -33599340 - Lx3A LINE L1 -599 6382 6249 2 1246 1643 134 4 4 chr13 86684970 86685233 -33599079 - Lx3A LINE L1 -31 5855 5593 2 1246 337 286 12 0 chr13 86685233 86685317 -33598995 + MurERV4_19-int LTR ERVK 5299 5383 -397 2 1246 382 236 72 79 chr13 86685387 86685539 -33598773 + MYSERV-int LTR ERVK 5213 5363 -1187 2 1246 23 78 0 0 chr13 86685630 86685681 -33598631 + AT_rich Low_complexity Low_complexity 1 51 0 2 1246 1042 239 109 66 chr13 86685691 86686041 -33598271 - RMER2 LTR ERV1 -4 563 199 2 1246 182 176 20 0 chr13 86686290 86686341 -33597971 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1246 227 79 26 0 chr13 86686549 86686587 -33597725 + (TA)n Simple_repeat Simple_repeat 1 39 0 2 1246 1084 91 0 0 chr13 86686587 86686730 -33597582 - B1_Mus2 SINE Alu -4 143 1 2 1246 303 371 0 0 chr13 86686781 86686886 -33597426 + B1F SINE Alu 6 110 -39 2 1246 5439 205 38 14 chr13 86687124 86689044 -33595268 + Lx3C LINE L1 5008 7009 0 2 1246 228 248 32 81 chr13 86689456 86689579 -33594733 - Lx9 LINE L1 0 7644 7528 2 1246 1688 59 0 5 chr13 86691135 86691355 -33592957 - L1_Mus1 LINE L1 0 6567 6349 2 1246 1319 99 10 10 chr13 86691433 86691626 -33592686 - B2_Mm1a SINE B2 0 193 1 2 1246 25 31 0 0 chr13 86691650 86691682 -33592630 + AT_rich Low_complexity Low_complexity 1 32 0 2 1246 1977 104 40 3 chr13 86692013 86692311 -33592001 + L1_Mus4 LINE L1 6320 6628 -8 2 1246 280 390 13 7 chr13 86692955 86693110 -33591202 - B3 SINE B2 -1 215 60 2 1246 531 82 0 0 chr13 86693543 86693616 -33590696 + (TTTC)n Simple_repeat Simple_repeat 4 76 0 2 1246 519 395 19 0 chr13 86693620 86693777 -33590535 - RSINE1 SINE B4 -2 163 4 2 1246 1131 225 56 92 chr13 86694316 86694708 -33589604 + ORR1C1 LTR MaLR 1 378 0 2 1246 1707 219 75 21 chr13 86694708 86695132 -33589180 + ORR1C1-int LTR MaLR 1 447 -1062 2 1246 509 283 146 72 chr13 86695144 86695479 -33588833 - RLTR9A LTR ERVK -8 360 1 2 1246 398 277 46 46 chr13 86695844 86696041 -33588271 - MMERGLN-int LTR ERV1 -115 7663 7467 2 1246 406 221 41 89 chr13 86696042 86696211 -33588101 - RNLTR23 LTR ERVK -2 640 480 3 1246 13117 285 52 55 chr13 86696895 86697212 -33587100 - RNERVK23-int LTR ERVK -403 7814 7570 3 1246 1446 37 26 26 chr13 86697212 86697244 -33587068 - B2_Mm1a SINE B2 0 193 161 3 1246 207 0 0 0 chr13 86697244 86697267 -33587045 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 3 1246 1446 37 26 26 chr13 86697267 86697427 -33586885 - B2_Mm1a SINE B2 -33 160 1 3 1246 13117 285 52 55 chr13 86697427 86702250 -33582062 - RNERVK23-int LTR ERVK -648 7569 2720 3 1246 194 0 39 0 chr13 86702250 86702276 -33582036 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1246 13117 285 52 55 chr13 86702276 86702899 -33581413 - RNERVK23-int LTR ERVK -5498 2719 2071 3 1246 823 341 3 19 chr13 86702961 86703329 -33580983 - RNERVK23-int LTR ERVK -6620 1597 1236 3 1246 382 49 36 36 chr13 86703488 86703572 -33580740 + (TTTTG)n Simple_repeat Simple_repeat 2 85 0 3 1246 277 380 6 12 chr13 86703595 86703760 -33580552 - RNERVK23-int LTR ERVK -7170 1047 884 3 1246 7156 58 0 0 chr13 86703760 86704657 -33579655 + L1Md_F2 LINE L1 4690 5586 -297 3 1246 8062 50 2 0 chr13 86704657 86705650 -33578662 + L1Md_F2 LINE L1 5587 6581 -1 3 1246 1174 258 16 3 chr13 86706088 86706411 -33577901 - RNERVK23-int LTR ERVK -7720 497 171 3 1246 430 251 22 84 chr13 86706576 86706754 -33577558 - RNLTR23 LTR ERVK 0 642 476 3 1246 528 312 0 0 chr13 86707001 86707142 -33577170 - MMERGLN-int LTR ERV1 -333 7223 7083 2 1246 738 179 29 6 chr13 86707265 86707439 -33576873 - RMER16-int LTR ERVK -1706 3700 3523 3 1246 6661 126 41 14 chr13 86707451 86708550 -33575762 - RMER16-int LTR ERVK -2712 2694 1566 3 1246 295 268 34 61 chr13 86708590 86708737 -33575575 - RMER6-int LTR ERVK -951 2226 2084 3 1246 367 230 0 0 chr13 86708861 86708935 -33575377 - RLTR45-int LTR ERVK -3250 4156 4083 3 1246 638 258 104 60 chr13 86708947 86709215 -33575097 - RMER16 LTR ERVK -83 450 171 3 1246 715 304 5 72 chr13 86709223 86709663 -33574649 - RLTR45-int LTR ERVK -3809 3435 3203 3 1246 395 264 8 24 chr13 86709657 86709781 -33574531 - RLTR45-int LTR ERVK -2136 1178 1057 3 1246 5365 159 57 49 chr13 86709774 86710288 -33574024 - RMER16-int LTR ERVK -3840 1566 1080 3 1246 1071 77 14 0 chr13 86710288 86710431 -33573881 - B1_Mus1 SINE Alu -1 147 3 3 1246 5365 170 57 50 chr13 86710431 86711156 -33573156 - RMER16-int LTR ERVK -5686 1720 476 3 1246 252 359 23 0 chr13 86711173 86711301 -33573011 - ETnERV-int LTR ERVK -2855 459 329 3 1246 474 246 136 70 chr13 86711496 86711841 -33572471 - RLTR9A LTR ERVK 0 368 1 3 1246 398 240 56 98 chr13 86711844 86711858 -33572454 + ORR1C1-int LTR MaLR 449 462 -1047 3 1246 216 0 0 0 chr13 86711858 86711882 -33572430 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1246 398 240 56 98 chr13 86711882 86712010 -33572302 + ORR1C1-int LTR MaLR 463 584 -925 3 1246 1834 261 49 67 chr13 86712021 86712851 -33571461 + ORR1C1-int LTR MaLR 771 1507 -2 3 1246 1184 216 18 157 chr13 86712856 86713295 -33571017 + ORR1C1 LTR MaLR 1 378 0 3 1246 270 0 0 0 chr13 86715289 86715319 -33568993 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1246 303 271 12 12 chr13 86715444 86715556 -33568756 - L1_Mur2 LINE L1 -1347 4536 4425 3 1246 35184 72 7 9 chr13 86715611 86721794 -33562518 - L1Md_F3 LINE L1 -14 6570 404 3 1246 23 0 0 0 chr13 86724012 86724035 -33560277 + AT_rich Low_complexity Low_complexity 1 23 0 3 1246 37427 48 1 4 chr13 86724117 86730550 -33553762 - L1Md_T LINE L1 0 6585 78 3 1246 721 265 27 37 chr13 86730726 86730914 -33553398 + MTD LTR MaLR 1 186 -233 3 1246 821 334 130 29 chr13 86730971 86731603 -33552709 - Lx8 LINE L1 -527 6946 6251 3 1246 257 312 0 18 chr13 86732016 86732127 -33552185 - Lx7 LINE L1 -1872 5824 5716 3 1246 563 311 34 54 chr13 86732155 86732717 -33551595 + L1_Mur3 LINE L1 4376 4894 -953 3 1246 3143 142 42 2 chr13 86732730 86733254 -33551058 - Lx LINE L1 -2 6652 6108 3 1246 596 51 13 0 chr13 86733254 86733332 -33550980 - Lx LINE L1 -800 5854 5776 3 1246 2494 193 10 27 chr13 86733347 86733655 -33550657 + L1_Mm LINE L1 4735 5039 -844 3 1246 559 241 206 41 chr13 86733655 86733971 -33550341 + RLTR9A LTR ERVK 1 368 0 3 1246 2494 193 10 27 chr13 86733971 86734026 -33550286 + L1_Mm LINE L1 5040 5093 -790 3 1246 4591 137 124 73 chr13 86734026 86734999 -33549313 - RLTR13D2 LTR ERVK 0 1023 1 3 1246 2494 193 10 27 chr13 86734999 86735157 -33549155 + L1_Mm LINE L1 5094 5248 -635 3 1246 582 297 103 32 chr13 86735156 86735727 -33548585 + L1_Mur3 LINE L1 4918 5574 -723 3 1246 257 270 27 0 chr13 86736001 86736161 -33548151 + (CATATA)n Simple_repeat Simple_repeat 1 164 0 3 1246 21 36 0 0 chr13 86736686 86736714 -33547598 + AT_rich Low_complexity Low_complexity 1 28 0 3 1246 1378 133 17 0 chr13 86737616 86737856 -33546456 + Lx2A LINE L1 6755 6998 -10 3 1246 252 0 0 0 chr13 86737856 86737884 -33546428 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 3 1246 26 64 0 0 chr13 86739039 86739086 -33545226 + AT_rich Low_complexity Low_complexity 1 47 0 3 1246 26 50 0 0 chr13 86739623 86739663 -33544649 + AT_rich Low_complexity Low_complexity 1 40 0 3 1246 189 74 0 0 chr13 86739733 86739760 -33544552 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1246 273 298 0 69 chr13 86739932 86740033 -33544279 - PB1 SINE Alu -27 100 7 3 1246 563 281 24 81 chr13 86740088 86740297 -33544015 + B3A SINE B2 2 198 0 3 1246 33 104 0 16 chr13 86740346 86740531 -33543781 + AT_rich Low_complexity Low_complexity 1 182 0 3 1246 621 100 0 0 chr13 86741029 86741119 -33543193 + (GGGA)n Simple_repeat Simple_repeat 1 90 0 3 1246 351 136 0 0 chr13 86742731 86742790 -33541522 + (GGGA)n Simple_repeat Simple_repeat 3 61 0 3 1246 774 0 0 0 chr13 86743408 86743494 -33540818 + (CAAAA)n Simple_repeat Simple_repeat 2 87 0 3 1246 355 252 16 70 chr13 86743705 86743833 -33540479 - Lx7 LINE L1 -15 7681 7561 3 1246 565 306 0 65 chr13 86743837 86743991 -33540321 + B1_Mur3 SINE Alu 6 149 0 3 1246 239 0 0 31 chr13 86744007 86744039 -33540273 + (TAA)n Simple_repeat Simple_repeat 3 33 0 3 1246 2689 269 120 37 chr13 86744039 86745270 -33539042 - Lx7 LINE L1 -166 7530 6197 3 1246 3876 150 12 22 chr13 86745270 86745951 -33538361 - Lx LINE L1 -6 6648 5975 3 1246 9094 111 61 12 chr13 86745991 86746861 -33537451 - MusHAL1 LINE L1 -477 2235 1317 3 1246 3003 60 34 3 chr13 86746861 86747245 -33537067 - MTA_Mm LTR MaLR 0 396 1 3 1246 9094 111 61 12 chr13 86747245 86747737 -33536575 - MusHAL1 LINE L1 -1396 1316 797 3 1246 225 83 0 0 chr13 86747737 86747773 -33536539 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 3 1246 9094 111 61 12 chr13 86747773 86747997 -33536315 - MusHAL1 LINE L1 -1916 796 570 3 1246 1455 159 8 0 chr13 86747990 86748247 -33536065 - L1_Mm LINE L1 -416 5467 5209 3 1246 309 333 14 7 chr13 86748280 86748428 -33535884 - Lx7 LINE L1 -382 7314 7166 3 1246 665 174 22 0 chr13 86749150 86749288 -33535024 - L1_Mur3 LINE L1 -2210 3667 3527 3 1246 5894 90 12 1 chr13 86749299 86750115 -33534197 - L1_Mus2 LINE L1 0 6566 5742 3 1246 5053 71 12 0 chr13 86750115 86750780 -33533532 + L1_Mus2 LINE L1 5065 5737 -146 3 1246 3014 223 69 86 chr13 86750768 86751935 -33532377 - L1_Mur3 LINE L1 -2324 3553 2407 3 1246 1569 238 43 38 chr13 86751937 86752769 -33531543 - L1_Mur3 LINE L1 -4158 1719 885 3 1246 39 38 0 0 chr13 86753347 86753400 -33530912 + AT_rich Low_complexity Low_complexity 1 53 0 3 1246 2003 177 99 48 chr13 86754079 86754554 -33529758 - RLTR19 LTR ERVK 0 499 1 3 1246 2932 39 0 0 chr13 86754716 86755071 -33529241 - L1Md_A LINE L1 0 6582 6228 3 1246 3637 184 31 19 chr13 86755369 86756104 -33528208 - RMER6A LTR ERVK -12 744 1 3 1246 243 88 0 0 chr13 86756435 86756469 -33527843 + (TA)n Simple_repeat Simple_repeat 2 35 0 3 1246 972 320 58 13 chr13 86757134 86757514 -33526798 - MERVL_2A-int LTR ERVL -2171 3590 3194 3 1246 1399 313 43 17 chr13 86757519 86757671 -33526641 - MERVL_2A-int LTR ERVL -3141 2620 2474 3 1246 3322 158 76 101 chr13 86757671 86758600 -33525712 + RMER17A2 LTR ERVK 1 906 0 3 1246 1399 316 43 17 chr13 86758600 86759095 -33525217 - MERVL_2A-int LTR ERVL -3288 2473 1854 3 1246 2595 157 37 14 chr13 86760270 86760762 -33523550 - Lx2A1 LINE L1 -11 6997 6495 3 1246 3909 127 43 27 chr13 86760762 86761419 -33522893 + Lx2A1 LINE L1 5799 6465 -543 3 1246 3952 97 43 0 chr13 86762287 86762863 -33521449 + L1_Mur1 LINE L1 5277 5877 -9 3 1246 4177 116 3 2 chr13 86762865 86763477 -33520835 + Lx3_Mus LINE L1 6397 7009 0 3 1246 237 298 11 116 chr13 86764647 86764742 -33519570 + RMER21A LTR ERV1 761 845 -102 3 1246 216 86 0 0 chr13 86764771 86764806 -33519506 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1246 7198 128 14 2 chr13 86765032 86766454 -33517858 - Lx LINE L1 0 6654 5217 3 1246 994 109 0 14 chr13 86766513 86766653 -33517659 - B1_Mus2 SINE Alu -9 138 1 3 1246 1310 288 62 39 chr13 86766923 86767484 -33516828 - RMER15 LTR ERVL -1 574 1 3 1246 483 314 39 7 chr13 86768091 86768245 -33516067 - B3A SINE B2 -38 160 2 3 1246 308 295 126 26 chr13 86768333 86768705 -33515607 + L1MA6 LINE L1 5321 5733 -558 3 1246 231 306 48 20 chr13 86768733 86768880 -33515432 + L1MA6 LINE L1 5794 5944 -356 3 155 2125 267 92 35 chr13 86768901 86770580 -33513732 - Lx6 LINE L1 -27 7433 5396 3 1247 979 244 22 25 chr13 86770580 86770896 -33513416 + L1_Mur3 LINE L1 1278 1592 -4285 3 1247 37081 7 11 12 chr13 86770899 86775972 -33508340 + L1Md_A LINE L1 1 4947 -936 3 1247 225 183 46 77 chr13 86775972 86776037 -33508275 - RMER20A LTR ERVK -268 248 186 3 1247 37081 7 11 12 chr13 86776037 86776691 -33507621 + L1Md_A LINE L1 4948 5586 -297 3 1247 9026 2 0 0 chr13 86776691 86777687 -33506625 + L1Md_A LINE L1 5587 6582 0 3 1247 448 165 0 12 chr13 86777692 86777778 -33506534 + L1_Mur3 LINE L1 1581 1665 -4215 3 1247 198 0 0 0 chr13 86777793 86777815 -33506497 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 3 1247 263 259 84 25 chr13 86777816 86777935 -33506377 - Lx5 LINE L1 -16 7034 6909 3 1247 1028 224 16 0 chr13 86777934 86778188 -33506124 + L1_Mur3 LINE L1 1694 1951 -3929 3 1247 363 157 0 0 chr13 86778252 86778341 -33505971 + GA-rich Low_complexity Low_complexity 2 90 0 3 1247 268 306 35 18 chr13 86778341 86778454 -33505858 + MTD LTR MaLR 303 417 -2 3 1247 285 51 0 0 chr13 86778486 86778525 -33505787 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1247 324 0 0 0 chr13 86778526 86778562 -33505750 + (TA)n Simple_repeat Simple_repeat 2 37 0 3 1247 22 56 0 0 chr13 86778579 86778615 -33505697 + AT_rich Low_complexity Low_complexity 1 36 0 3 1247 27 0 0 0 chr13 86780146 86780173 -33504139 + AT_rich Low_complexity Low_complexity 1 27 0 3 1247 252 0 0 0 chr13 86780559 86780587 -33503725 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1247 31 0 0 0 chr13 86780639 86780670 -33503642 + AT_rich Low_complexity Low_complexity 1 31 0 3 1247 45 19 0 0 chr13 86781217 86781269 -33503043 + AT_rich Low_complexity Low_complexity 1 52 0 3 1247 24 53 0 0 chr13 86782074 86782112 -33502200 + AT_rich Low_complexity Low_complexity 1 38 0 3 1247 611 269 48 39 chr13 86782254 86782597 -33501715 + Lx4B LINE L1 732 1074 -5583 3 1247 4354 225 132 21 chr13 86782594 86783847 -33500465 + Lx4B LINE L1 5663 7054 -4 3 1247 257 219 50 8 chr13 86783851 86783971 -33500341 + (TA)n Simple_repeat Simple_repeat 2 126 0 3 1247 306 212 32 44 chr13 86783956 86784114 -33500198 + (TTATA)n Simple_repeat Simple_repeat 4 159 0 3 1247 43 56 0 0 chr13 86784114 86784185 -33500127 + AT_rich Low_complexity Low_complexity 1 71 0 3 1247 749 243 118 31 chr13 86784325 86784614 -33499698 + L1_Rod LINE L1 5515 5828 -19 3 1247 282 87 0 0 chr13 86785031 86785077 -33499235 + (TC)n Simple_repeat Simple_repeat 2 47 0 3 1247 26 30 0 0 chr13 86785934 86785967 -33498345 + AT_rich Low_complexity Low_complexity 1 33 0 3 1247 245 316 40 10 chr13 86786426 86786525 -33497787 - MLT1B LTR MaLR 0 390 289 3 1247 527 53 13 0 chr13 86786785 86786860 -33497452 + (TCTA)n Simple_repeat Simple_repeat 3 78 0 3 1247 678 58 29 0 chr13 86786865 86786969 -33497343 + (TAGA)n Simple_repeat Simple_repeat 2 108 0 3 1247 267 93 0 0 chr13 86787123 86787166 -33497146 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1247 3049 152 42 41 chr13 86787584 86788173 -33496139 - Lx LINE L1 0 6654 6065 4 1247 3178 140 8 30 chr13 86788180 86788464 -33495848 + Lx LINE L1 5508 5799 -84 4 1247 1174 62 0 0 chr13 86788464 86788609 -33495703 + B1_Mm SINE Alu 3 147 0 4 1247 3178 124 4 28 chr13 86788609 86788895 -33495417 + Lx LINE L1 5800 6074 -580 4 1247 268 292 65 19 chr13 86789312 86789420 -33494892 + PB1D7 SINE Alu 8 120 0 4 1247 664 198 6 18 chr13 86789424 86789594 -33494718 + GA-rich Low_complexity Low_complexity 1 168 0 4 1247 19921 31 0 2 chr13 86790969 86794031 -33490281 - L1Md_T LINE L1 0 6582 3526 4 1247 1398 175 20 0 chr13 86794031 86794283 -33490029 + Lx2A1 LINE L1 6750 7006 -2 4 1247 468 18 0 0 chr13 86794395 86794450 -33489862 - L1_Mm LINE L1 -1913 3970 3916 4 1247 662 211 8 9 chr13 86794495 86794643 -33489669 + B1_Mus1 SINE Alu 1 147 -1 4 1247 23 0 0 0 chr13 86794644 86794667 -33489645 + AT_rich Low_complexity Low_complexity 1 23 0 4 1247 1538 159 29 7 chr13 86794795 86795067 -33489245 - Lx2 LINE L1 -256 6741 6464 4 1247 29 60 0 0 chr13 86795360 86795410 -33488902 + AT_rich Low_complexity Low_complexity 1 50 0 4 1247 474 33 0 0 chr13 86795663 86795723 -33488589 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 1247 746 50 0 10 chr13 86795748 86795849 -33488463 - B1_Mm SINE Alu -1 146 47 4 1247 324 215 12 60 chr13 86795775 86795859 -33488453 - MT2B LTR ERVL -325 276 197 4 1247 232 233 0 104 chr13 86795806 86795873 -33488439 - 4.5SRNA scRNA scRNA -8 86 27 4 1247 315 349 89 35 chr13 86796938 86797140 -33487172 + LFSINE_Vert SINE SINE 228 440 -19 4 1247 2239 120 0 0 chr13 86798787 86799113 -33485199 + Lx2 LINE L1 6320 6645 -352 4 1247 1295 173 13 0 chr13 86799108 86799333 -33484979 + Lx2 LINE L1 6770 6997 0 4 1247 240 323 75 0 chr13 86799377 86799510 -33484802 - Lx8 LINE L1 -362 7111 6969 4 1247 1172 235 189 85 chr13 86799527 86799957 -33484355 - RMER6A LTR ERVK -34 722 273 4 1247 2648 121 19 0 chr13 86799957 86800371 -33483941 - BGLII_Mus LTR ERVK 0 422 1 4 1247 1172 172 251 12 chr13 86800371 86800653 -33483659 - RMER6A LTR ERVK -344 346 2 4 1247 4537 213 83 38 chr13 86800943 86802657 -33481655 + Lx5 LINE L1 889 3059 -2827 4 1247 576 77 0 0 chr13 86802657 86802735 -33481577 + (CAG)n Simple_repeat Simple_repeat 1 78 0 4 1247 3809 235 340 20 chr13 86802735 86803670 -33480642 + Lx5 LINE L1 3060 4376 -1510 4 1247 4133 196 26 17 chr13 86803672 86804798 -33479514 + Lx5 LINE L1 4956 6112 -938 4 1247 303 286 85 51 chr13 86804812 86805013 -33479299 + RLTR16 LTR ERVK 32 295 -282 4 1247 3304 229 51 59 chr13 86805406 86806332 -33477980 + Lx5 LINE L1 6127 7044 -6 4 1247 237 321 47 12 chr13 86806358 86806443 -33477869 - Lx8 LINE L1 -512 6961 6874 4 1247 537 339 158 14 chr13 86806617 86806901 -33477411 - Lx8 LINE L1 -777 6696 6372 4 1247 13833 116 38 26 chr13 86807020 86809768 -33474544 + L1_Mus3 LINE L1 3490 6270 -368 4 1247 604 197 22 86 chr13 86809773 86810007 -33474305 - RMER2 LTR ERV1 -248 319 1 4 1247 2699 176 33 0 chr13 86810096 86810579 -33473733 - RLTR19 LTR ERVK 0 499 1 4 1247 3673 16 121 0 chr13 86810687 86811127 -33473185 + MT2_Mm LTR ERVL 1 493 0 4 1247 413 302 124 5 chr13 86811384 86811577 -33472735 - Lx6 LINE L1 -404 7056 6841 4 1247 297 136 0 0 chr13 86811578 86811644 -33472668 + (TCTCTG)n Simple_repeat Simple_repeat 6 71 0 4 1247 330 26 0 0 chr13 86811639 86811678 -33472634 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1247 2575 212 55 61 chr13 86811680 86812012 -33472300 + RMER6D LTR ERVK 7 319 -401 4 1247 663 37 0 0 chr13 86812012 86812094 -33472218 + (GGGGA)n Simple_repeat Simple_repeat 5 86 0 4 1247 2575 212 55 61 chr13 86812094 86812468 -33471844 + RMER6D LTR ERVK 320 709 -11 4 1247 8923 209 58 50 chr13 86812508 86814007 -33470305 + RMER6-int LTR ERVK 16 1467 -1710 4 1247 4466 71 7 7 chr13 86814007 86814606 -33469706 + L1Md_F2 LINE L1 5972 6570 -12 4 1247 8923 209 58 50 chr13 86814606 86815366 -33468946 + RMER6-int LTR ERVK 1468 2294 -883 4 1247 943 215 24 10 chr13 86815366 86815573 -33468739 - RLTR25A LTR ERVK -463 640 431 4 1247 9288 52 0 0 chr13 86815581 86816729 -33467583 + L1Md_F2 LINE L1 4439 5586 -297 4 1247 7907 52 3 3 chr13 86816729 86817725 -33466587 + L1Md_F2 LINE L1 5587 6582 0 4 1247 2571 184 51 18 chr13 86817725 86818325 -33465987 + RMER6-int LTR ERVK 2654 3177 0 4 1247 1369 192 11 0 chr13 86818326 86818586 -33465726 + RMER6D LTR ERVK 3 265 -425 4 1247 1226 228 54 60 chr13 86818743 86819074 -33465238 + ORR1A4 LTR MaLR 1 329 0 4 1247 25 0 0 0 chr13 86819769 86819794 -33464518 + AT_rich Low_complexity Low_complexity 1 25 0 4 1247 40 21 0 0 chr13 86820878 86820925 -33463387 + AT_rich Low_complexity Low_complexity 1 47 0 4 1247 564 354 34 139 chr13 86821167 86821548 -33462764 - ORR1E LTR MaLR 0 359 19 4 1247 225 419 42 8 chr13 86821702 86821820 -33462492 + MLT1A0 LTR MaLR 170 291 -74 4 1247 7249 110 15 1 chr13 86822617 86823987 -33460325 - L1_Mus3 LINE L1 -5 6633 5243 4 1247 40286 18 1 6 chr13 86823988 86830187 -33454125 - L1Md_A LINE L1 0 6582 418 4 1247 5028 149 11 45 chr13 86830211 86830991 -33453321 - L1_Mus3 LINE L1 -693 5190 4430 4 1247 1736 33 9 0 chr13 86830991 86831204 -33453108 - L1Md_F2 LINE L1 -8 6574 6360 4 1247 5028 149 11 45 chr13 86831204 86831371 -33452941 - L1_Mus3 LINE L1 -1454 4429 4276 4 1247 11413 112 31 5 chr13 86831364 86832154 -33452158 - L1VL4 LINE L1 -756 2803 2007 4 1247 390 42 0 0 chr13 86832154 86832202 -33452110 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 4 1247 11413 151 44 14 chr13 86832202 86833988 -33450324 - L1VL4 LINE L1 -1553 2006 154 4 1247 38 61 0 0 chr13 86835886 86835952 -33448360 + AT_rich Low_complexity Low_complexity 1 66 0 4 1247 30 0 0 0 chr13 86836276 86836306 -33448006 + AT_rich Low_complexity Low_complexity 1 30 0 4 1247 827 246 70 9 chr13 86836366 86836579 -33447733 + L1_Mus4 LINE L1 6404 6629 -7 4 1247 1507 241 64 27 chr13 86836563 86837014 -33447298 + L1_Mur3 LINE L1 5332 5799 -81 4 1247 898 225 45 23 chr13 86836997 86837306 -33447006 + L1_Mur3 LINE L1 4211 4526 -1354 4 1247 1903 256 92 76 chr13 86837270 86837886 -33446426 + RMER1A Other Other 272 894 -136 4 1247 321 26 0 0 chr13 86837886 86837924 -33446388 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1247 1903 253 99 83 chr13 86837924 86838011 -33446301 + RMER1A Other Other 895 937 -93 4 1247 7319 40 0 0 chr13 86838011 86838890 -33445422 + L1Md_T LINE L1 5704 6582 0 4 1247 1903 253 99 83 chr13 86838890 86838980 -33445332 + RMER1A Other Other 938 1028 -2 4 1247 2248 213 46 22 chr13 86839013 86839595 -33444717 + L1_Mur3 LINE L1 4584 5179 -701 4 1247 5085 15 13 10 chr13 86839600 86840206 -33444106 + L1Md_T LINE L1 4979 5586 -297 4 1247 8156 47 0 0 chr13 86840206 86841202 -33443110 + L1Md_T LINE L1 5587 6582 0 4 1247 489 315 7 0 chr13 86841204 86841347 -33442965 + Lx7 LINE L1 6610 6753 -943 4 1247 2218 253 66 74 chr13 86841396 86841866 -33442446 + Lx7 LINE L1 6868 7359 -337 4 1247 393 22 0 0 chr13 86841866 86841912 -33442400 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1247 2218 253 66 74 chr13 86841912 86842277 -33442035 + Lx7 LINE L1 7360 7696 0 4 1247 4363 283 34 29 chr13 86842294 86843815 -33440497 + Lx7 LINE L1 5782 7310 -386 4 1247 24 77 0 0 chr13 86843947 86843999 -33440313 + AT_rich Low_complexity Low_complexity 1 52 0 4 1247 1690 231 86 20 chr13 86843999 86844612 -33439700 + Lx3_Mus LINE L1 31 1071 -5913 4 1247 6488 145 56 18 chr13 86844605 86845934 -33438378 + Lx3_Mus LINE L1 1984 4085 -1801 4 1247 5779 106 119 4 chr13 86845940 86846897 -33437415 + Lx3_Mus LINE L1 4541 5607 -279 4 1247 6794 113 66 5 chr13 86846897 86846981 -33437331 + Lx3_Mus LINE L1 5824 5907 -1102 4 1247 216 0 0 0 chr13 86846981 86847005 -33437307 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 4 1247 6794 113 66 5 chr13 86847005 86847114 -33437198 + Lx3_Mus LINE L1 5908 6030 -979 4 1247 414 0 0 0 chr13 86847114 86847160 -33437152 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1247 6794 113 66 5 chr13 86847160 86848075 -33436237 + Lx3_Mus LINE L1 6031 6999 -10 4 1247 227 103 0 25 chr13 86848081 86848121 -33436191 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1247 28 48 0 0 chr13 86848366 86848408 -33435904 + AT_rich Low_complexity Low_complexity 1 42 0 4 1247 27 29 0 0 chr13 86848518 86848552 -33435760 + AT_rich Low_complexity Low_complexity 1 34 0 4 1247 1085 82 7 0 chr13 86848634 86848780 -33435532 + B1_Mm SINE Alu 1 147 0 4 1247 195 162 0 0 chr13 86848780 86848817 -33435495 + A-rich Low_complexity Low_complexity 1 37 0 4 1247 23 0 0 0 chr13 86849682 86849705 -33434607 + AT_rich Low_complexity Low_complexity 1 23 0 4 1247 516 302 0 0 chr13 86849893 86850019 -33434293 - B3 SINE B2 -90 126 1 4 1247 2296 148 91 2 chr13 86850934 86851339 -33432973 - Lx2 LINE L1 0 6997 6557 4 1247 471 112 0 0 chr13 86851362 86851451 -33432861 + (TC)n Simple_repeat Simple_repeat 2 90 0 4 1247 477 50 0 0 chr13 86851452 86851512 -33432800 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 1247 2863 15 0 48 chr13 86852434 86852788 -33431524 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 1247 56113 18 16 0 chr13 86852788 86859159 -33425153 + IAPEz-int LTR ERVK 8 6481 0 4 1247 2863 15 0 48 chr13 86859159 86859513 -33424799 + IAPLTR1a_Mm LTR ERVK 1 337 0 4 1247 1240 332 50 4 chr13 86859538 86860040 -33424272 - Lx9 LINE L1 -797 6847 6323 4 1247 297 87 22 0 chr13 86860225 86860271 -33424041 + RMER6C LTR ERVK 5 51 -669 4 1247 537 192 25 0 chr13 86860327 86860447 -33423865 + RMER6C LTR ERVK 229 351 -339 4 1247 898 183 8 25 chr13 86860523 86860742 -33423570 + RMER6C LTR ERVK 472 686 -70 4 1247 7143 65 0 0 chr13 86860757 86861673 -33422639 - L1_Mm LINE L1 -529 5354 4439 4 1247 794 161 105 0 chr13 86861697 86861840 -33422472 + RMER6D LTR ERVK 558 715 -5 4 1247 5623 80 30 10 chr13 86861926 86862740 -33421572 - RLTR13C2 LTR ERVK -28 874 1 4 1247 13133 117 23 6 chr13 86862744 86863491 -33420821 + L1_Mur1 LINE L1 1137 1896 -3990 4 1247 216 0 0 0 chr13 86863491 86863515 -33420797 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1247 13133 117 24 6 chr13 86863515 86863836 -33420476 + L1_Mur1 LINE L1 1897 2216 -3670 4 1247 1025 109 0 0 chr13 86863836 86863973 -33420339 + B1_Mm SINE Alu 1 137 -10 4 1247 750 43 0 0 chr13 86863973 86864067 -33420245 + (GAAA)n Simple_repeat Simple_repeat 2 95 0 4 1247 13133 117 24 6 chr13 86864067 86865134 -33419178 + L1_Mur1 LINE L1 2217 3309 -2577 4 1247 225 0 0 0 chr13 86865134 86865159 -33419153 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 4 1247 13133 117 24 6 chr13 86865159 86865239 -33419073 + L1_Mur1 LINE L1 3310 3390 -2496 4 1247 491 272 52 17 chr13 86865241 86865357 -33418955 + ETnERV2-int LTR ERVK 7083 7202 -204 4 1247 1463 240 12 22 chr13 86865772 86866096 -33418216 - Lx6 LINE L1 -436 7024 6704 4 1247 202 284 0 19 chr13 86866171 86866251 -33418061 + A-rich Low_complexity Low_complexity 1 79 0 4 1247 198 0 0 0 chr13 86866251 86866273 -33418039 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1247 202 284 0 19 chr13 86866273 86866296 -33418016 + A-rich Low_complexity Low_complexity 80 102 0 4 1247 1195 305 81 13 chr13 86866298 86866766 -33417546 - Lx7 LINE L1 -368 7328 6829 4 1247 731 306 8 41 chr13 86866814 86867080 -33417232 - Lx7 LINE L1 -976 6720 6464 4 1247 370 258 32 0 chr13 86867091 86867213 -33417099 - Lx7 LINE L1 -536 5776 5609 4 1247 239 50 50 0 chr13 86869045 86869085 -33415227 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 4 1247 195 129 0 0 chr13 86869359 86869390 -33414922 + (TTTTC)n Simple_repeat Simple_repeat 5 35 0 4 1247 35 41 0 0 chr13 86869527 86869576 -33414736 + AT_rich Low_complexity Low_complexity 1 49 0 4 1247 207 0 0 0 chr13 86870028 86870051 -33414261 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 4 1247 2497 130 50 0 chr13 86870087 86870542 -33413770 - Lx2 LINE L1 -980 6017 5544 4 1247 698 180 8 0 chr13 86870539 86870661 -33413651 + Lx2 LINE L1 5372 5494 -389 4 1247 696 206 211 0 chr13 86871172 86871366 -33412946 - L1_Mur3 LINE L1 -317 5563 5329 4 1247 767 320 40 126 chr13 86871370 86871927 -33412385 + Lx6 LINE L1 6949 7457 -3 4 1247 8564 26 1 0 chr13 86871968 86873658 -33410654 - L1Md_A LINE L1 -1 6581 4890 4 1247 7094 43 5 1 chr13 86873721 86874573 -33409739 - RLTR13A LTR ERVK 0 855 1 4 1247 755 271 19 41 chr13 86875546 86875815 -33408497 + Lx4B LINE L1 848 1110 -5524 4 1247 1317 124 9 9 chr13 86875815 86876027 -33408285 + L1_Mus3 LINE L1 6403 6614 -24 4 1247 371 21 21 0 chr13 86876030 86876078 -33408234 + (TAA)n Simple_repeat Simple_repeat 3 51 0 4 1247 4071 203 32 18 chr13 86876085 86877287 -33407025 + Lx4B LINE L1 1104 2327 -3550 4 1247 423 0 0 0 chr13 86878084 86878131 -33406181 + (TTA)n Simple_repeat Simple_repeat 3 49 0 5 1247 219 36 0 0 chr13 86878131 86878159 -33406153 + (ATG)n Simple_repeat Simple_repeat 1 28 0 5 1247 4011 128 38 65 chr13 86878469 86879241 -33405071 - RMER17A LTR ERVK 0 751 1 5 1247 1027 181 5 10 chr13 86879571 86879766 -33404546 + Lx4B LINE L1 2322 2515 -3362 4 1247 411 21 0 0 chr13 86879790 86879838 -33404474 + (TAAAA)n Simple_repeat Simple_repeat 3 50 0 5 1247 8735 175 63 7 chr13 86879839 86880485 -33403827 + Lx4B LINE L1 3946 4622 -1255 4 1247 185 0 40 0 chr13 86880485 86880510 -33403802 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 1247 8735 191 65 7 chr13 86880510 86882116 -33402196 + Lx4B LINE L1 4623 6342 -716 4 1247 543 16 0 0 chr13 86882116 86882180 -33402132 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 1247 5378 232 68 6 chr13 86882180 86882845 -33401467 + Lx4B LINE L1 6343 7034 -24 4 1247 441 54 0 0 chr13 86882850 86882906 -33401406 + (TAGA)n Simple_repeat Simple_repeat 3 58 0 5 1247 420 37 0 0 chr13 86883408 86883462 -33400850 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1247 297 0 0 0 chr13 86883785 86883818 -33400494 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1247 1113 82 0 7 chr13 86883905 86884053 -33400259 + B1_Mus2 SINE Alu 1 147 0 5 1247 26 50 0 0 chr13 86884841 86884881 -33399431 + AT_rich Low_complexity Low_complexity 1 40 0 5 1247 25 31 0 0 chr13 86885159 86885191 -33399121 + AT_rich Low_complexity Low_complexity 1 32 0 5 1247 398 69 17 0 chr13 86885551 86885609 -33398703 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 5 1247 4105 178 37 4 chr13 86885614 86886349 -33397963 - Lx4A LINE L1 -28 7030 6272 5 1247 1113 144 31 10 chr13 86886349 86886545 -33397767 - L1_Mur2 LINE L1 -303 5574 5375 5 1247 1110 268 151 9 chr13 86887120 86887572 -33396740 - RMER1B Other Other -11 1055 571 5 1247 27 29 0 0 chr13 86888648 86888682 -33395630 + AT_rich Low_complexity Low_complexity 1 34 0 5 1247 2756 189 176 3 chr13 86888797 86889552 -33394760 - RMER19B LTR ERVK -12 890 5 5 1247 5505 93 13 0 chr13 86889806 86890569 -33393743 + Lx3_Mus LINE L1 6237 7009 0 5 1247 426 309 23 38 chr13 86891091 86891222 -33393090 - ID_B1 SINE B4 -6 218 90 5 1247 320 311 9 78 chr13 86891840 86891955 -33392357 + PB1D7 SINE Alu 7 113 -7 5 1247 24 32 0 0 chr13 86892000 86892031 -33392281 + AT_rich Low_complexity Low_complexity 1 31 0 5 1247 37654 43 1 3 chr13 86892782 86899025 -33385287 - L1Md_T LINE L1 0 6585 256 5 1247 25 51 0 0 chr13 86899027 86899066 -33385246 + AT_rich Low_complexity Low_complexity 1 39 0 5 1247 7651 61 5 4 chr13 86899310 86900673 -33383639 - L1Md_F2 LINE L1 -19 6563 5199 5 1248 2032 292 28 52 chr13 86900771 86901443 -33382869 - Lx6 LINE L1 -49 7411 6756 5 1248 775 84 28 7 chr13 86901444 86901588 -33382724 + (TCTA)n Simple_repeat Simple_repeat 2 148 0 5 1248 1771 50 0 0 chr13 86901588 86901809 -33382503 - L1Md_T LINE L1 -3 6579 6359 5 1248 4310 35 0 0 chr13 86901809 86902318 -33381994 + L1Md_A LINE L1 5861 6369 -213 5 1248 239 114 71 0 chr13 86902324 86902394 -33381918 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 5 1248 192 97 0 0 chr13 86902424 86902455 -33381857 + (CAGAGA)n Simple_repeat Simple_repeat 4 34 0 5 1248 596 143 0 0 chr13 86902505 86902596 -33381716 + B1_Mus2 SINE Alu 57 147 0 5 1248 1199 95 0 87 chr13 86902914 86903122 -33381190 - Lx3B LINE L1 -990 5983 5794 5 1248 829 199 11 22 chr13 86903115 86903300 -33381012 - L1_Mur3 LINE L1 -1312 4568 4386 5 1248 2209 234 89 17 chr13 86903301 86904052 -33380260 - L1_Mur3 LINE L1 -1730 4150 3346 5 1248 13531 115 38 16 chr13 86904247 86905561 -33378751 - L1_Mus2 LINE L1 0 6566 5298 5 1248 1163 68 0 0 chr13 86905561 86905708 -33378604 - B1_Mm SINE Alu 0 147 1 5 1248 13531 204 132 50 chr13 86905708 86906858 -33377454 - L1_Mus2 LINE L1 -586 5297 4195 5 1248 301 103 29 0 chr13 86906858 86906926 -33377386 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 5 1248 13531 204 132 50 chr13 86906926 86909346 -33374966 - L1_Mus2 LINE L1 -1689 4194 1333 5 1248 1763 291 99 6 chr13 86909366 86909690 -33374622 - L1_Mur3 LINE L1 -5782 1304 953 5 1248 222 37 0 0 chr13 86909690 86909717 -33374595 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1248 1763 329 59 41 chr13 86909717 86910885 -33373427 - L1_Mur3 LINE L1 -6710 1018 26 5 1248 22 0 0 0 chr13 86910911 86910933 -33373379 + AT_rich Low_complexity Low_complexity 1 22 0 5 1248 252 300 81 24 chr13 86911491 86911614 -33372698 - Lx9 LINE L1 -417 7227 7098 5 1248 325 275 8 0 chr13 86911831 86911951 -33372361 - Lx9 LINE L1 -9 7635 7515 5 1248 249 135 0 0 chr13 86911952 86912004 -33372308 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1248 403 313 103 25 chr13 86912057 86912260 -33372052 - Lx9 LINE L1 -176 7468 7250 5 1248 2960 8 5 88 chr13 86912260 86912660 -33371652 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1248 8453 82 53 22 chr13 86912662 86913987 -33370325 + IAPEz-int LTR ERVK 3 1313 -5168 5 1248 28968 18 1 0 chr13 86913986 86917253 -33367059 + IAPEz-int LTR ERVK 3210 6481 0 5 1248 2960 8 5 88 chr13 86917253 86917653 -33366659 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1248 754 268 26 31 chr13 86917654 86917881 -33366431 - Lx9 LINE L1 -390 7254 7029 5 1248 330 348 66 75 chr13 86917984 86918332 -33365980 - MER67B LTR ERV1 -311 350 6 5 1248 372 348 79 5 chr13 86918714 86918916 -33365396 + L1MDa LINE L1 21 237 -6396 5 1248 297 304 56 6 chr13 86919241 86919403 -33364909 + L1MD1 LINE L1 6067 6236 -6 5 1248 21 57 0 0 chr13 86919436 86919471 -33364841 + AT_rich Low_complexity Low_complexity 1 35 0 5 1248 2940 78 41 12 chr13 86920096 86920512 -33363800 + L1_Mus2 LINE L1 6136 6563 -3 5 1248 225 0 0 0 chr13 86920841 86920866 -33363446 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1248 28 29 0 0 chr13 86921428 86921463 -33362849 + AT_rich Low_complexity Low_complexity 1 35 0 5 1248 39 68 0 0 chr13 86921529 86921603 -33362709 + AT_rich Low_complexity Low_complexity 1 74 0 5 1248 44 56 0 0 chr13 86922141 86922213 -33362099 + AT_rich Low_complexity Low_complexity 1 72 0 5 1248 210 156 0 0 chr13 86922564 86922609 -33361703 + (CATA)n Simple_repeat Simple_repeat 2 46 0 5 1248 301 158 50 0 chr13 86922644 86922745 -33361567 + (TCTA)n Simple_repeat Simple_repeat 1 106 0 5 1248 10451 109 29 27 chr13 86923025 86925647 -33358665 + L1VL4 LINE L1 8 2634 -925 5 1248 25 0 0 0 chr13 86925672 86925697 -33358615 + AT_rich Low_complexity Low_complexity 1 25 0 5 1248 3385 171 55 2 chr13 86926715 86927349 -33356963 - Lx3A LINE L1 -7 6974 6307 5 1248 25269 136 13 27 chr13 86927350 86928133 -33356179 + L1_Mus2 LINE L1 1543 2312 -3571 5 1248 528 68 0 0 chr13 86928133 86928206 -33356106 - B1_Mur4 SINE Alu 0 150 78 5 1248 25269 136 13 27 chr13 86928206 86928899 -33355413 + L1_Mus2 LINE L1 2313 2995 -2888 5 1248 615 62 0 0 chr13 86928899 86928979 -33355333 + (GAA)n Simple_repeat Simple_repeat 2 81 0 5 1248 25269 136 13 27 chr13 86928979 86930944 -33353368 + L1_Mus2 LINE L1 2996 4988 -895 5 1248 366 23 0 0 chr13 86930944 86930987 -33353325 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 5 1248 180 0 0 0 chr13 86930987 86931007 -33353305 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 5 1248 25269 117 9 15 chr13 86931007 86932579 -33351733 + L1_Mus2 LINE L1 4989 6566 0 5 1248 256 263 10 21 chr13 86932660 86932757 -33351555 + (CATATA)n Simple_repeat Simple_repeat 1 96 0 5 1248 1495 283 43 30 chr13 86932763 86933338 -33350974 + Lx7 LINE L1 6175 6757 -939 5 1248 717 200 138 6 chr13 86933338 86933519 -33350793 + URR1A DNA MER1_type 1 205 -21 5 1248 294 353 8 8 chr13 86933561 86933681 -33350631 + Lx6 LINE L1 6807 6926 -534 5 1248 934 255 19 0 chr13 86933692 86933908 -33350404 - URR1A DNA MER1_type -1 225 6 5 1248 715 342 33 12 chr13 86933909 86934246 -33350066 + Lx7 LINE L1 6937 7280 -416 5 1248 284 247 26 0 chr13 86934281 86934391 -33349921 + CT-rich Low_complexity Low_complexity 1 112 0 5 1248 23 68 0 0 chr13 86934580 86934624 -33349688 + AT_rich Low_complexity Low_complexity 1 44 0 5 1248 477 0 0 0 chr13 86934780 86934833 -33349479 + (TA)n Simple_repeat Simple_repeat 1 53 0 5 1248 4215 76 27 40 chr13 86935122 86935751 -33348561 - L1Md_F2 LINE L1 -1 6581 5961 5 1248 21 36 0 0 chr13 86936296 86936324 -33347988 + AT_rich Low_complexity Low_complexity 1 28 0 5 1248 24 0 0 0 chr13 86936570 86936594 -33347718 + AT_rich Low_complexity Low_complexity 1 24 0 5 1248 189 0 0 0 chr13 86937195 86937216 -33347096 + (TTTAA)n Simple_repeat Simple_repeat 3 23 0 5 1248 28 0 0 0 chr13 86937495 86937523 -33346789 + AT_rich Low_complexity Low_complexity 1 28 0 5 1248 276 26 0 0 chr13 86937554 86937592 -33346720 + Lx2 LINE L1 6954 6991 -6 5 1248 3375 174 7 39 chr13 86937698 86938384 -33345928 + Lx3B LINE L1 6307 6970 -3 5 1248 8937 109 16 42 chr13 86938394 86938783 -33345529 - L1_Mur1 LINE L1 -1569 4317 3934 5 1248 1011 108 0 0 chr13 86938783 86938922 -33345390 + B1_Mm SINE Alu 1 139 -8 5 1248 498 17 0 0 chr13 86938923 86938982 -33345330 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 5 1248 8937 109 16 42 chr13 86938982 86940118 -33344194 - L1_Mur1 LINE L1 -1953 3933 2830 5 1248 3263 153 120 11 chr13 86940122 86940243 -33344069 + Lx3_Mus LINE L1 5789 5909 -1100 5 1248 288 0 0 0 chr13 86940243 86940275 -33344037 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 5 1248 3263 153 120 11 chr13 86940275 86940801 -33343511 + Lx3_Mus LINE L1 5910 6506 -503 5 1248 470 250 21 0 chr13 86940807 86940903 -33343409 + B4 SINE B4 1 98 -194 5 1248 273 61 0 0 chr13 86940908 86940941 -33343371 + Lx3_Mus LINE L1 6505 6537 -472 5 1248 1529 154 51 92 chr13 86941228 86941557 -33342755 + Lx LINE L1 6312 6626 -28 5 1248 387 0 0 0 chr13 86941557 86941600 -33342712 + (TAA)n Simple_repeat Simple_repeat 3 45 0 5 1248 555 222 104 0 chr13 86941616 86941751 -33342561 + B1_Mur4 SINE Alu 2 150 0 5 1248 343 101 319 0 chr13 86941784 86941853 -33342459 - Lx2A1 LINE L1 -311 6697 6607 5 1248 322 293 71 26 chr13 86941883 86942037 -33342275 - L1MC3 LINE L1 -701 7084 6924 5 1248 207 0 0 0 chr13 86942342 86942365 -33341947 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1248 230 259 0 0 chr13 86942884 86942942 -33341370 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 5 1248 292 143 48 0 chr13 86942951 86943014 -33341298 + Lx9 LINE L1 7384 7449 -195 5 1248 289 239 68 0 chr13 86943030 86943118 -33341194 - L1_Rod LINE L1 -6498 674 581 5 1248 2566 132 82 18 chr13 86943504 86943944 -33340368 + MT2B2 LTR ERVL 1 468 -116 5 1248 857 268 84 84 chr13 86944021 86944380 -33339932 - RLTR20B3 LTR ERVK -198 379 21 5 1248 258 239 15 0 chr13 86944414 86944481 -33339831 + MTC LTR MaLR 1 68 -351 5 1248 680 280 11 21 chr13 86944526 86944716 -33339596 + MTC LTR MaLR 226 413 -8 5 1248 266 329 62 49 chr13 86944745 86944853 -33339459 + Lx6 LINE L1 6823 6939 -521 5 1248 1996 188 57 104 chr13 86944853 86945466 -33338846 - RLTR31A_Mm LTR ERVK 0 584 1 5 1248 266 329 62 49 chr13 86945466 86945501 -33338811 + Lx6 LINE L1 6940 6968 -492 5 1248 7027 107 11 2 chr13 86945606 86946602 -33337710 - L1_Mus4 LINE L1 -3 6633 5629 5 1248 3099 189 7 0 chr13 86946789 86947378 -33336934 - L1_Mm LINE L1 -168 5715 5123 5 1248 232 211 0 19 chr13 86947499 86947533 -33336779 + (CATATA)n Simple_repeat Simple_repeat 1 34 0 5 1248 3996 109 76 62 chr13 86947533 86948274 -33336038 + RMER17A LTR ERVK 1 751 0 6 1248 232 211 0 19 chr13 86948274 86948292 -33336020 + (CATATA)n Simple_repeat Simple_repeat 5 22 0 6 1248 1191 233 66 42 chr13 86949870 86950372 -33333940 - RMER2 LTR ERV1 0 567 9 6 1248 360 0 0 0 chr13 86950595 86950635 -33333677 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1248 2111 211 54 72 chr13 86951078 86951835 -33332477 - RMER6A LTR ERVK -4 716 101 6 1248 2811 106 14 5 chr13 86952198 86952615 -33331697 + BGLII LTR ERVK 1 421 0 6 1248 685 203 14 57 chr13 86952712 86952921 -33331391 + RMER3D-int LTR ERVK 652 851 -1991 6 1248 463 152 0 15 chr13 86953054 86953171 -33331141 + RMER3D-int LTR ERVK 489 564 -2278 6 1248 335 279 162 31 chr13 86953174 86953366 -33330946 + HAL1-3A_ME LINE L1 2287 2439 -419 6 1248 681 165 11 33 chr13 86953393 86953575 -33330737 + GA-rich Low_complexity Low_complexity 3 180 0 6 1248 2047 156 107 17 chr13 86953648 86954125 -33330187 + RMER3D-int LTR ERVK 1014 1533 -1309 6 1248 507 174 69 42 chr13 86954157 86954301 -33330011 + RMER3D-int LTR ERVK 1532 1679 -1163 6 1248 2749 200 102 62 chr13 86954320 86955298 -33329014 + MYSERV16_I-int LTR ERVK 1306 2322 -4 6 1248 2476 143 22 0 chr13 86955298 86955710 -33328602 + BGLII LTR ERVK 1 421 0 6 1248 6966 168 18 5 chr13 86956905 86958165 -33326147 - Lx4A LINE L1 -11 7047 5772 6 1248 1694 123 4 0 chr13 86958167 86958419 -33325893 - ORR1A2 LTR MaLR -2 325 73 6 1248 5226 218 34 47 chr13 86958419 86958811 -33325501 + Lx6 LINE L1 4467 4825 -1055 6 1248 243 0 0 0 chr13 86958811 86958838 -33325474 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1248 5226 224 36 46 chr13 86958838 86960151 -33324161 + Lx6 LINE L1 4826 6169 -1291 6 1248 237 188 42 0 chr13 86960152 86960200 -33324112 - Lx6 LINE L1 -668 6792 6743 6 1248 873 304 4 0 chr13 86960233 86960486 -33323826 - Lx5 LINE L1 -598 6452 6199 6 1248 6786 40 1 0 chr13 86960504 86961306 -33323006 + RLTR13B4 LTR ERVK 1 803 0 6 1248 820 288 15 107 chr13 86961361 86961820 -33322492 - L1_Rod LINE L1 -15 5832 5416 6 1248 423 291 89 40 chr13 86962039 86962286 -33322026 - L1MA6 LINE L1 -128 6172 5914 6 1248 381 22 0 0 chr13 86962356 86962402 -33321910 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1248 301 236 11 0 chr13 86962406 86962495 -33321817 - Lx9 LINE L1 -163 7481 7392 6 1248 28 71 0 0 chr13 86963176 86963232 -33321080 + AT_rich Low_complexity Low_complexity 1 56 0 6 1248 32 43 0 0 chr13 86963424 86963470 -33320842 + AT_rich Low_complexity Low_complexity 1 46 0 6 1248 31 58 0 0 chr13 86963991 86964043 -33320269 + AT_rich Low_complexity Low_complexity 1 52 0 6 1248 4112 233 24 2 chr13 86964314 86965175 -33319137 - Lx2B LINE L1 -6 6994 6115 6 1248 5326 76 19 2 chr13 86965170 86966336 -33317976 + L1_Mus2 LINE L1 5064 6248 -318 6 1248 347 55 18 0 chr13 86966336 86966391 -33317921 + L1_Mus2 LINE L1 6511 6566 0 6 1248 405 0 0 0 chr13 86966827 86966872 -33317440 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1248 1076 102 0 0 chr13 86966895 86967042 -33317270 - B1_Mus1 SINE Alu 0 148 2 6 1248 32 0 0 0 chr13 86967095 86967127 -33317185 + AT_rich Low_complexity Low_complexity 1 32 0 6 1248 24 0 0 0 chr13 86968805 86968829 -33315483 + AT_rich Low_complexity Low_complexity 1 24 0 6 1248 484 218 58 199 chr13 86970590 86970831 -33313481 + RLTR23 LTR ERV1 1 207 -223 6 1248 2192 251 10 26 chr13 86970831 86971339 -33312973 - RLTR16 LTR ERVK 0 505 6 6 1248 2856 193 85 15 chr13 86971368 86972119 -33312193 - MYSERV16_I-int LTR ERVK -17 2309 1506 6 1248 4269 118 17 106 chr13 86972119 86973000 -33311312 - RMER17D2 LTR ERVK -6 803 1 6 1248 251 138 34 17 chr13 86973000 86973059 -33311253 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 6 1248 1860 179 33 20 chr13 86973059 86973509 -33310803 - MYSERV16_I-int LTR ERVK -809 1517 1062 6 1248 1247 223 10 61 chr13 86973506 86973817 -33310495 - MYSERV16_I-int LTR ERVK -1393 933 639 6 1248 993 187 42 12 chr13 86973844 86974110 -33310202 - MYSERV16_I-int LTR ERVK -1840 486 277 6 1248 868 223 15 54 chr13 86974119 86974380 -33309932 - RMER3D-int LTR ERVK -1464 1378 1128 6 1248 21 0 0 0 chr13 86974441 86974462 -33309850 + AT_rich Low_complexity Low_complexity 1 21 0 6 1248 1153 192 37 5 chr13 86975163 86975256 -33309056 - RLTR16 LTR ERVK 0 505 413 6 1248 333 0 0 0 chr13 86975256 86975293 -33309019 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1248 1153 192 37 5 chr13 86975293 86975414 -33308898 - RLTR16 LTR ERVK -93 412 285 6 1248 889 157 42 12 chr13 86975412 86975580 -33308732 - RLTR16 LTR ERVK -327 178 6 6 1248 7969 228 34 17 chr13 86976069 86978923 -33305389 - Lx2 LINE L1 -19 6978 4070 6 1248 4166 176 10 3 chr13 86978917 86979900 -33304412 + Lx LINE L1 5065 6051 -603 6 1248 25 31 0 0 chr13 86980282 86980314 -33303998 + AT_rich Low_complexity Low_complexity 1 32 0 6 1248 293 264 48 20 chr13 86981539 86981686 -33302626 + ORR1B1-int LTR MaLR 604 754 -755 6 1248 1093 36 0 7 chr13 86981589 86981727 -33302585 + B1_Mus1 SINE Alu 12 148 0 6 1248 207 0 0 0 chr13 86981737 86981760 -33302552 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1248 409 304 106 44 chr13 86982364 86982657 -33301655 + L1MD LINE L1 4151 4461 -1685 6 1248 252 0 0 0 chr13 86982663 86982691 -33301621 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1248 22 0 0 0 chr13 86982834 86982856 -33301456 + AT_rich Low_complexity Low_complexity 1 22 0 6 1248 271 261 26 51 chr13 86982900 86983017 -33301295 - RMER1C Other Other -1 1341 1228 6 1248 715 201 14 14 chr13 86983210 86983356 -33300956 - B1_Mus1 SINE Alu 0 148 3 6 1248 4978 47 30 48 chr13 86983395 86984084 -33300228 + L1Md_F3 LINE L1 5908 6584 0 6 1248 259 360 44 24 chr13 86984195 86984648 -33299664 + L1MC LINE L1 4805 5266 -880 6 1248 3088 83 60 0 chr13 86985251 86985685 -33298627 - L1_Mus2 LINE L1 -430 6136 5677 6 1248 2999 77 7 42 chr13 86985685 86986132 -33298180 + L1_Mus2 LINE L1 6135 6565 -1 6 1248 13488 92 3 9 chr13 86986142 86988873 -33295439 + L1Md_F2 LINE L1 457 3127 -2756 6 1248 6696 73 0 7 chr13 86988873 86989753 -33294559 + L1Md_F2 LINE L1 4713 5586 -297 6 1248 8025 48 2 0 chr13 86989753 86990734 -33293578 + L1Md_F2 LINE L1 5587 6569 -13 6 1248 291 313 0 0 chr13 86990741 86990875 -33293437 + A-rich Low_complexity Low_complexity 1 134 0 6 1248 2410 220 71 36 chr13 86990888 86991637 -33292675 + L1_Mus2 LINE L1 387 1161 -5455 6 1248 26701 135 12 26 chr13 86991625 86991706 -33292606 + L1_Mus2 LINE L1 1267 1345 -4538 6 1248 5274 90 37 18 chr13 86991706 86992495 -33291817 - RLTR13D1 LTR ERVK -2 804 1 6 1248 26701 135 12 26 chr13 86992495 86992977 -33291335 + L1_Mus2 LINE L1 1346 1820 -4063 6 1248 3304 41 5 0 chr13 86992977 86993371 -33290941 - MTA_Mm LTR MaLR 0 396 1 6 1248 26701 128 11 24 chr13 86993371 86997588 -33286724 + L1_Mus2 LINE L1 1821 5981 -585 6 1248 2799 178 26 14 chr13 86997589 86998171 -33286141 - RLTR22_Mur LTR ERVK -1259 589 1 6 1248 3171 166 58 5 chr13 86998518 86999124 -33285188 + L1_Mus3 LINE L1 5998 6635 -3 6 1248 5360 127 23 1 chr13 86999124 87000000 -33284312 + MusHAL1 LINE L1 891 1785 -927 6 1248 3933 136 44 3 chr13 87000000 87000706 -33283606 + L1_Mm LINE L1 2990 3724 -2159 1 1248 2765 117 4 113 chr13 87000694 87001223 -33283089 - L1Md_F LINE L1 -1032 4851 4381 2 1248 7188 132 14 2 chr13 87001222 87002888 -33281424 - L1Md_F LINE L1 -3473 2410 725 2 1248 308 228 101 90 chr13 87002890 87003068 -33281244 - L1Md_F LINE L1 -5813 803 671 2 1248 198 0 0 0 chr13 87003136 87003158 -33281154 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1248 344 169 0 217 chr13 87003158 87003264 -33281048 - L1VL1 LINE L1 -6296 126 44 4 1248 2888 263 43 33 chr13 87003282 87003582 -33280730 - Lx7 LINE L1 -493 7203 6885 5 1248 402 115 0 0 chr13 87003582 87003643 -33280669 + (TATG)n Simple_repeat Simple_repeat 2 62 0 6 1248 2888 263 43 33 chr13 87003643 87004202 -33280110 - Lx7 LINE L1 -812 6884 6335 5 1248 1116 286 25 14 chr13 87004215 87004569 -33279743 + Lx7 LINE L1 5984 6341 -1355 5 1248 399 217 12 0 chr13 87005206 87005289 -33279023 - Lx4A LINE L1 -1159 5899 5816 7 1248 3312 201 12 9 chr13 87005292 87005944 -33278368 + Lx4A LINE L1 5890 6543 -515 7 1248 450 0 0 0 chr13 87006119 87006169 -33278143 + (TC)n Simple_repeat Simple_repeat 1 50 0 8 1248 330 26 0 0 chr13 87006169 87006208 -33278104 + (TA)n Simple_repeat Simple_repeat 1 39 0 9 1248 22 35 0 0 chr13 87006319 87006348 -33277964 + AT_rich Low_complexity Low_complexity 1 29 0 1 1248 279 0 0 0 chr13 87007667 87007698 -33276614 + (TTA)n Simple_repeat Simple_repeat 1 31 0 1 1248 422 267 56 48 chr13 87007837 87007963 -33276349 + B1_Mur2 SINE Alu 4 130 -19 1 1248 422 364 112 39 chr13 87007945 87008151 -33276161 - MTA_Mm LTR MaLR -149 221 1 1 1248 537 266 64 1 chr13 87008151 87008294 -33276018 - MTA_Mm-int LTR MaLR -53 1527 1218 1 1248 1780 187 21 10 chr13 87008294 87008683 -33275629 + Lx LINE L1 6261 6653 -1 1 1248 23 0 0 0 chr13 87009821 87009844 -33274468 + AT_rich Low_complexity Low_complexity 1 23 0 1 1248 993 325 55 6 chr13 87010017 87010360 -33273952 + ORR1D2 LTR MaLR 6 365 -5 1 1248 183 42 0 0 chr13 87010397 87010421 -33273891 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 1248 1969 142 3 0 chr13 87010442 87010745 -33273567 - Lx LINE L1 -445 6209 5906 1 1248 4690 199 1 1 chr13 87010743 87011056 -33273256 + L1_Mur1 LINE L1 4978 5290 -596 1 1248 594 70 0 10 chr13 87011056 87011157 -33273155 + L1Md_F3 LINE L1 6471 6570 -14 2 1248 4690 199 1 1 chr13 87011157 87011752 -33272560 + L1_Mur1 LINE L1 5291 5886 0 1 1248 5549 66 1 1 chr13 87012026 87012772 -33271540 - MTA_Mm-int LTR MaLR -352 746 1 1 1248 3155 63 2 0 chr13 87012772 87013167 -33271145 - MTA_Mm LTR MaLR 0 396 1 1 1248 4137 174 19 15 chr13 87013168 87013966 -33270346 + L1_Mur2 LINE L1 4343 5143 -734 2 1248 1384 169 25 40 chr13 87013961 87014239 -33270073 - L1_Mm LINE L1 -85 5798 5525 2 1248 207 0 0 0 chr13 87014262 87014285 -33270027 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1248 6590 148 5 5 chr13 87015136 87016193 -33268119 + Lx LINE L1 5598 6654 0 2 1248 879 67 0 0 chr13 87016391 87016510 -33267802 + (GGAA)n Simple_repeat Simple_repeat 3 121 0 2 1248 258 345 66 16 chr13 87017350 87017471 -33266841 - RMER15 LTR ERVL -36 539 413 2 1248 26 0 0 0 chr13 87018623 87018649 -33265663 + AT_rich Low_complexity Low_complexity 1 26 0 2 1248 1008 80 43 0 chr13 87018650 87018788 -33265524 + B1_Mm SINE Alu 2 145 -2 2 1248 502 346 77 22 chr13 87019575 87019758 -33264554 - B3A SINE B2 -1 197 5 2 1248 42 0 0 0 chr13 87019947 87019989 -33264323 + AT_rich Low_complexity Low_complexity 1 42 0 3 1248 183 167 0 0 chr13 87021196 87021238 -33263074 + (TTG)n Simple_repeat Simple_repeat 1 42 0 3 1248 211 0 88 0 chr13 87021239 87021273 -33263039 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 1248 1598 343 57 60 chr13 87022142 87022580 -33261732 - Lx8 LINE L1 -173 7300 6843 3 1248 3156 126 10 12 chr13 87022580 87023085 -33261227 + Lx3B LINE L1 6470 6973 0 3 1248 1598 343 57 60 chr13 87023085 87023112 -33261200 - Lx8 LINE L1 -631 6842 6837 3 1248 183 42 0 0 chr13 87023112 87023136 -33261176 + (CTA)n Simple_repeat Simple_repeat 3 26 0 3 1248 270 0 0 0 chr13 87023137 87023167 -33261145 + (TCC)n Simple_repeat Simple_repeat 3 32 0 3 1248 261 0 0 0 chr13 87023167 87023195 -33261117 + (TAA)n Simple_repeat Simple_repeat 1 29 0 3 1248 1598 343 57 60 chr13 87023195 87023423 -33260889 - Lx8 LINE L1 -637 6836 6624 3 1248 225 47 70 0 chr13 87023423 87023466 -33260846 + (TAA)n Simple_repeat Simple_repeat 3 48 0 3 1248 1598 343 57 60 chr13 87023466 87023774 -33260538 - Lx8 LINE L1 -850 6623 6299 3 1248 438 20 0 0 chr13 87023814 87023865 -33260447 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1248 905 304 68 22 chr13 87023951 87024581 -33259731 - Lx8 LINE L1 -1647 6049 5383 3 1248 539 364 124 21 chr13 87025137 87025749 -33258563 - Lx8 LINE L1 -590 6883 6209 4 1248 188 125 0 48 chr13 87026105 87026147 -33258165 + T-rich Low_complexity Low_complexity 2 41 0 4 1248 354 344 65 31 chr13 87026173 87026497 -33257815 - L1_Mur3 LINE L1 -93 5784 5450 4 1248 487 298 139 31 chr13 87026512 87027100 -33257212 + Lx8 LINE L1 3902 4553 -1327 4 1248 271 314 0 17 chr13 87027191 87027311 -33257001 + Lx8 LINE L1 5644 5761 -1712 4 1248 751 342 42 60 chr13 87027703 87028147 -33256165 + Lx8 LINE L1 6127 6576 -897 4 1248 2225 150 0 3 chr13 87028147 87028515 -33255797 - Lx LINE L1 0 6654 6288 4 1248 751 342 42 60 chr13 87028515 87028670 -33255642 + Lx8 LINE L1 6577 6715 -758 4 1248 249 328 129 84 chr13 87028823 87029002 -33255310 + Lx8 LINE L1 7099 7306 -167 4 1248 351 0 0 0 chr13 87029002 87029041 -33255271 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1248 249 328 129 84 chr13 87029041 87029124 -33255188 + Lx8 LINE L1 7307 7373 -100 4 1248 385 300 11 6 chr13 87029237 87029418 -33254894 - L1_Mur3 LINE L1 -470 5410 5229 4 1248 21 36 0 0 chr13 87030388 87030416 -33253896 + AT_rich Low_complexity Low_complexity 1 28 0 4 1248 21 0 0 0 chr13 87030925 87030946 -33253366 + AT_rich Low_complexity Low_complexity 1 21 0 4 1248 6878 114 7 12 chr13 87030996 87031341 -33252971 - L1_Mus3 LINE L1 0 6638 6297 4 19 5139 114 24 38 chr13 87031341 87032242 -33252070 + RMER17D LTR ERVK 1 889 0 4 1249 13015 167 28 62 chr13 87032242 87038005 -33246307 - L1_Mus3 LINE L1 -342 6296 708 4 1249 1191 281 72 45 chr13 87038538 87038985 -33245327 + RLTR20B3 LTR ERVK 21 473 -104 5 1249 372 22 0 0 chr13 87038985 87039030 -33245282 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1249 1191 251 74 74 chr13 87039030 87039110 -33245202 + RLTR20B3 LTR ERVK 450 528 0 5 1249 279 0 0 0 chr13 87039407 87039438 -33244874 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1249 185 139 23 0 chr13 87039578 87039621 -33244691 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1249 546 350 0 68 chr13 87039627 87039817 -33244495 - B3A SINE B2 -16 182 6 5 1249 22 0 0 0 chr13 87040411 87040433 -33243879 + AT_rich Low_complexity Low_complexity 1 22 0 5 1249 2505 32 10 10 chr13 87040531 87040842 -33243470 + L1Md_T LINE L1 5276 5586 -297 5 1249 8316 37 0 1 chr13 87040842 87041839 -33242473 + L1Md_T LINE L1 5587 6582 0 5 1249 208 339 8 25 chr13 87043430 87043551 -33240761 + (TAGA)n Simple_repeat Simple_repeat 1 119 0 5 1249 25 0 0 0 chr13 87043905 87043930 -33240382 + AT_rich Low_complexity Low_complexity 1 25 0 5 1249 1352 214 25 32 chr13 87044369 87044683 -33239629 + RMER4A LTR ERVK 3 314 -152 5 1249 540 279 27 0 chr13 87044787 87044934 -33239378 - BGLII_B LTR ERVK -23 418 268 6 1249 7328 174 50 3 chr13 87045312 87047407 -33236905 - Lx LINE L1 0 6654 4460 6 1249 235 111 0 0 chr13 87047400 87047436 -33236876 + L1_Mur2 LINE L1 4423 4458 -1419 6 1249 444 104 0 0 chr13 87048068 87048135 -33236177 + (TATG)n Simple_repeat Simple_repeat 2 68 0 6 1249 462 326 33 39 chr13 87048151 87048333 -33235979 - B4A SINE B4 -38 254 74 6 1249 219 316 0 0 chr13 87048413 87048470 -33235842 - B4 SINE B4 -232 60 4 6 1249 21 0 0 0 chr13 87048589 87048610 -33235702 + AT_rich Low_complexity Low_complexity 1 21 0 6 1249 24 32 0 0 chr13 87048684 87048715 -33235597 + AT_rich Low_complexity Low_complexity 1 31 0 6 1249 807 282 92 3 chr13 87048940 87049278 -33235034 - L1_Mur3 LINE L1 -866 5014 4647 6 1249 774 132 0 0 chr13 87049280 87049416 -33234896 + (TC)n Simple_repeat Simple_repeat 2 137 0 6 1249 207 0 0 0 chr13 87049418 87049441 -33234871 + (CA)n Simple_repeat Simple_repeat 1 23 0 6 1249 24 0 0 0 chr13 87049455 87049479 -33234833 + AT_rich Low_complexity Low_complexity 1 24 0 7 1249 338 275 52 68 chr13 87049512 87049703 -33234609 - L1_Mur3 LINE L1 -1244 4633 4446 6 1249 784 284 28 23 chr13 87049708 87050027 -33234285 + Lx8 LINE L1 5592 5927 -1546 7 1249 910 326 60 45 chr13 87050190 87050743 -33233569 + Lx8 LINE L1 6820 7380 -93 7 1249 249 146 0 0 chr13 87051178 87051226 -33233086 + (ATG)n Simple_repeat Simple_repeat 2 49 0 7 1249 252 238 95 84 chr13 87051626 87051805 -33232507 + L1MEb LINE L1 534 714 -5356 7 1249 312 91 0 0 chr13 87051826 87051870 -33232442 + (A)n Simple_repeat Simple_repeat 1 44 0 7 1249 833 200 0 0 chr13 87051904 87052054 -33232258 - Lx2A1 LINE L1 -759 6249 6100 7 1249 1549 175 16 16 chr13 87052055 87052363 -33231949 + Lx2A1 LINE L1 6692 6999 -9 7 1249 2033 166 10 22 chr13 87052446 87052859 -33231453 + RMER17C LTR ERVK 1 408 -2 7 1249 252 86 0 0 chr13 87053121 87053156 -33231156 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1249 507 363 46 12 chr13 87053180 87053420 -33230892 + Lx9 LINE L1 6399 6646 -998 7 1249 397 308 15 8 chr13 87053627 87053761 -33230551 + Lx9 LINE L1 6674 6808 -836 7 1249 3857 102 20 5 chr13 87053762 87054323 -33229989 + MT2B2 LTR ERVL 16 584 0 8 1249 901 302 16 36 chr13 87054325 87054713 -33229599 + Lx9 LINE L1 6813 7192 -452 7 1249 201 94 0 0 chr13 87054927 87054959 -33229353 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1249 27 29 0 0 chr13 87055486 87055520 -33228792 + AT_rich Low_complexity Low_complexity 1 34 0 8 1249 387 239 370 16 chr13 87056295 87056493 -33227819 + Lx6 LINE L1 6740 7007 -453 8 1249 336 171 119 24 chr13 87056485 87056611 -33227701 + Lx3_Mus LINE L1 6872 7009 0 8 1249 617 38 12 0 chr13 87056616 87056696 -33227616 + (GAGAA)n Simple_repeat Simple_repeat 2 82 0 8 1249 1445 251 54 78 chr13 87056696 87057180 -33227132 + Lx6 LINE L1 6989 7460 0 8 1249 1391 223 76 3 chr13 87057193 87057494 -33226818 + MTC LTR MaLR 3 325 -96 8 1249 396 0 0 0 chr13 87057509 87057553 -33226759 + (CA)n Simple_repeat Simple_repeat 1 44 0 8 1249 22 0 0 0 chr13 87058226 87058248 -33226064 + AT_rich Low_complexity Low_complexity 1 22 0 8 1249 25 0 0 0 chr13 87058256 87058281 -33226031 + AT_rich Low_complexity Low_complexity 1 25 0 8 1249 28 29 0 0 chr13 87058594 87058629 -33225683 + AT_rich Low_complexity Low_complexity 1 35 0 9 1249 384 22 0 0 chr13 87059001 87059046 -33225266 + (TC)n Simple_repeat Simple_repeat 1 45 0 9 1249 342 0 0 0 chr13 87059046 87059083 -33225229 + (CA)n Simple_repeat Simple_repeat 1 38 0 9 1249 1778 129 222 0 chr13 87059784 87060148 -33224164 - RLTR47_MM LTR ERV1 -87 445 1 9 1249 997 314 20 9 chr13 87060232 87060690 -33223622 - RLTR6-int LTR ERV1 -51 7727 7014 9 1249 1489 308 53 9 chr13 87060952 87061668 -33222644 - MuRRS4-int LTR ERV1 -1049 4014 3577 9 1249 2835 60 52 0 chr13 87061668 87062037 -33222275 - RLTR10 LTR ERVK -2 388 1 9 1249 8274 44 2 3 chr13 87062044 87063035 -33221277 - RLTR10-int LTR ERVK -1 1986 990 9 1249 574 267 56 53 chr13 87063117 87063402 -33220910 - RLTR10-int LTR ERVK -5987 1594 1309 9 1249 4124 50 15 7 chr13 87063565 87064178 -33220134 - RLTR10-int LTR ERVK -995 992 302 9 1249 272 200 38 104 chr13 87064178 87064284 -33220028 - RLTR10 LTR ERVK 0 390 292 9 1249 1327 64 6 0 chr13 87064309 87064480 -33219832 - RLTR10-int LTR ERVK -1775 212 41 9 1249 1215 54 183 0 chr13 87064492 87064678 -33219634 - RLTR10 LTR ERVK -2 388 169 9 1249 328 96 0 88 chr13 87064654 87064711 -33219601 + RLTR10 LTR ERVK 34 85 -305 9 1249 497 359 77 23 chr13 87065137 87065568 -33218744 - MuRRS4-int LTR ERV1 -3162 4444 3991 1 1249 1167 343 63 52 chr13 87065575 87066867 -33217445 - MuRRS4-int LTR ERV1 -5243 2535 1050 1 1249 694 185 127 0 chr13 87067937 87068094 -33216218 - RLTR47_MM LTR ERV1 0 532 356 1 1249 477 0 0 0 chr13 87068168 87068221 -33216091 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1249 22 0 0 0 chr13 87068789 87068811 -33215501 + AT_rich Low_complexity Low_complexity 1 22 0 1 1249 207 189 0 0 chr13 87069186 87069239 -33215073 + (ATG)n Simple_repeat Simple_repeat 2 54 0 1 1249 513 362 112 26 chr13 87071035 87071375 -33212937 - MTEa LTR MaLR -2 377 9 1 1249 21 0 0 0 chr13 87071929 87071950 -33212362 + AT_rich Low_complexity Low_complexity 1 21 0 1 1249 21 0 0 0 chr13 87072123 87072144 -33212168 + AT_rich Low_complexity Low_complexity 1 21 0 1 1249 1395 248 54 26 chr13 87072637 87073026 -33211286 + MTD LTR MaLR 20 419 0 1 1249 349 342 96 48 chr13 87073050 87073382 -33210930 - MTE-int LTR MaLR -19 1561 1214 1 1249 894 378 70 62 chr13 87073374 87074398 -33209914 - MTE-int LTR MaLR -546 1034 2 1 1249 9219 182 34 2 chr13 87075043 87078034 -33206278 + Lx2 LINE L1 3897 6996 -1 1 1249 21 36 0 0 chr13 87078196 87078224 -33206088 + AT_rich Low_complexity Low_complexity 1 28 0 1 1249 1983 103 0 117 chr13 87078555 87078905 -33205407 + L1_Mus3 LINE L1 6046 6354 -284 1 1249 25 51 0 0 chr13 87079399 87079438 -33204874 + AT_rich Low_complexity Low_complexity 1 39 0 1 1249 31957 79 2 6 chr13 87079445 87084675 -33199637 + L1Md_F2 LINE L1 288 5589 -297 1 1249 7699 59 6 1 chr13 87084675 87085664 -33198648 + L1Md_F2 LINE L1 5590 6583 -2 1 1249 3751 121 5 0 chr13 87085870 87086432 -33197880 - L1_Mus3 LINE L1 -233 6405 5841 1 1249 851 126 88 6 chr13 87086432 87086592 -33197720 + L1_Mus3 LINE L1 6458 6630 -8 1 1249 1805 66 0 0 chr13 87086760 87086986 -33197326 + L1Md_F2 LINE L1 6192 6417 -165 1 1249 22 70 0 0 chr13 87087089 87087132 -33197180 + AT_rich Low_complexity Low_complexity 1 43 0 1 1249 22 70 0 0 chr13 87087428 87087471 -33196841 + AT_rich Low_complexity Low_complexity 1 43 0 1 1249 384 312 150 22 chr13 87087899 87088125 -33196187 + Lx9 LINE L1 7051 7305 -339 1 1249 269 160 0 57 chr13 87088334 87088387 -33195925 + Lx4A LINE L1 6525 6574 -484 1 1249 292 161 18 0 chr13 87088383 87088439 -33195873 + Lx4A LINE L1 5593 5649 -1409 1 1249 7426 179 39 11 chr13 87088492 87090203 -33194109 + Lx4B LINE L1 5289 7051 -7 1 1249 349 252 38 110 chr13 87090234 87090470 -33193842 - Lx7 LINE L1 -123 7573 7355 1 1249 24 67 0 0 chr13 87090507 87090552 -33193760 + AT_rich Low_complexity Low_complexity 1 45 0 1 1249 899 273 58 25 chr13 87090937 87091215 -33193097 + Lx7 LINE L1 6831 7117 -579 1 1249 798 245 74 93 chr13 87091258 87091528 -33192784 + RMER6D LTR ERVK 142 406 -350 1 1249 2356 218 2 18 chr13 87091531 87092035 -33192277 + RMER6-int LTR ERVK 1245 1740 -1437 1 1249 1793 212 62 8 chr13 87092049 87092438 -33191874 - RMER19B LTR ERVK -11 891 482 1 1249 533 252 25 6 chr13 87092533 87092693 -33191619 + L1_Mur3 LINE L1 5270 5432 -448 1 1249 832 181 47 26 chr13 87092701 87092933 -33191379 + Lx9 LINE L1 7407 7643 -1 1 1249 1744 305 36 37 chr13 87092956 87093988 -33190324 + Lx8 LINE L1 5502 6536 -937 1 1249 1108 354 74 32 chr13 87094363 87094722 -33189590 + Lx8 LINE L1 6645 7012 -461 1 1249 2795 109 8 0 chr13 87094722 87095117 -33189195 + MTB LTR MaLR 3 400 0 1 1249 1108 354 74 32 chr13 87095117 87095526 -33188786 + Lx8 LINE L1 7013 7445 -28 1 1249 366 123 0 0 chr13 87095823 87095880 -33188432 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1249 23 0 0 0 chr13 87095905 87095928 -33188384 + AT_rich Low_complexity Low_complexity 1 23 0 1 1249 1196 41 7 0 chr13 87096044 87096189 -33188123 + B1_Mm SINE Alu 2 147 0 1 1249 36 62 0 0 chr13 87096807 87096871 -33187441 + AT_rich Low_complexity Low_complexity 1 64 0 1 1249 235 215 0 37 chr13 87096871 87096953 -33187359 + (TTAA)n Simple_repeat Simple_repeat 1 79 0 1 1249 1658 183 75 36 chr13 87097443 87097952 -33186360 - RLTR31B_Mm LTR ERVK 0 561 2 1 1249 251 241 62 25 chr13 87098156 87098237 -33186075 + Charlie23a DNA MER1_type 198 281 -58 1 1249 24 32 0 0 chr13 87099048 87099079 -33185233 + AT_rich Low_complexity Low_complexity 1 31 0 1 1249 771 301 59 31 chr13 87099404 87099760 -33184552 + ORR1D2 LTR MaLR 5 370 0 1 1249 3232 157 76 0 chr13 87100836 87101402 -33182910 - RLTR33 LTR ERVK 0 678 70 1 1249 354 143 0 0 chr13 87101411 87101474 -33182838 + (CATA)n Simple_repeat Simple_repeat 2 64 0 1 1249 3097 182 43 30 chr13 87101495 87102129 -33182183 - RLTR26 LTR ERVK 0 642 1 1 1249 250 266 13 0 chr13 87102930 87103009 -33181303 + (TA)n Simple_repeat Simple_repeat 1 80 0 1 1249 276 274 95 0 chr13 87103057 87103141 -33181171 + RMER1C Other Other 763 854 -488 1 1249 1894 230 110 86 chr13 87103142 87103726 -33180586 + RLTR25B LTR ERVK 1 598 -430 1 1249 1283 297 103 58 chr13 87103732 87104941 -33179371 + MYSERV-int LTR ERVK 381 1643 -4907 1 1249 1991 283 2 19 chr13 87104930 87105495 -33178817 + MurERV4-int LTR ERVK 4614 5168 -92 1 1249 225 0 0 0 chr13 87105675 87105700 -33178612 + (TCC)n Simple_repeat Simple_repeat 1 25 0 1 1249 383 221 67 59 chr13 87105700 87105835 -33178477 + RMER1C Other Other 1204 1339 -3 1 1249 63 26 0 0 chr13 87105955 87106032 -33178280 + AT_rich Low_complexity Low_complexity 1 77 0 1 1249 345 314 45 77 chr13 87106073 87106294 -33178018 + L1M2 LINE L1 4279 4492 -1651 1 1249 269 355 67 46 chr13 87106393 87106632 -33177680 + Lx8 LINE L1 6222 6465 -1008 1 1249 252 0 0 0 chr13 87106634 87106662 -33177650 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1249 180 0 0 0 chr13 87106660 87106680 -33177632 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1249 4268 139 31 1 chr13 87106868 87107553 -33176759 - Lx2 LINE L1 0 6997 6293 1 1249 543 259 41 143 chr13 87107559 87107852 -33176460 + Lx8 LINE L1 6753 7015 -458 1 1249 501 286 26 7 chr13 87107856 87108011 -33176301 + Lx7 LINE L1 6754 6911 -785 1 1249 184 93 0 65 chr13 87108217 87108263 -33176049 + A-rich Low_complexity Low_complexity 2 44 0 1 1249 257 263 32 0 chr13 87108361 87108456 -33175856 + T-rich Low_complexity Low_complexity 3 100 0 1 1249 29 28 0 0 chr13 87108596 87108632 -33175680 + AT_rich Low_complexity Low_complexity 1 36 0 1 1249 435 346 89 8 chr13 87108632 87109014 -33175298 + Lx8 LINE L1 7001 7413 -60 1 1249 225 108 0 0 chr13 87109014 87109051 -33175261 + (GGA)n Simple_repeat Simple_repeat 1 37 0 1 1249 1143 74 11 11 chr13 87109055 87109232 -33175080 + (GAA)n Simple_repeat Simple_repeat 3 179 0 1 1249 457 342 70 125 chr13 87109521 87109905 -33174407 - MTE2b LTR MaLR -14 365 3 1 1249 1022 271 26 138 chr13 87110613 87111041 -33173271 + ORR1C2 LTR MaLR 1 380 -4 1 1249 34 42 0 0 chr13 87111090 87111138 -33173174 + AT_rich Low_complexity Low_complexity 1 48 0 1 1249 183 121 52 0 chr13 87111636 87111694 -33172618 + A-rich Low_complexity Low_complexity 2 62 0 1 1249 6833 92 30 5 chr13 87112938 87113178 -33171134 - L1_Mus3 LINE L1 -3 6635 6378 1 1249 216 0 0 0 chr13 87113178 87113202 -33171110 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 1 1249 11324 93 30 7 chr13 87113202 87113961 -33170351 - L1_Mus3 LINE L1 -261 6377 5621 1 1249 626 0 14 0 chr13 87113961 87114035 -33170277 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 1 1249 11324 138 34 56 chr13 87114035 87115400 -33168912 - L1_Mus3 LINE L1 -266 5620 4296 1 1249 1216 41 0 0 chr13 87115400 87115547 -33168765 - B1_Mm SINE Alu 0 147 1 1 1249 11324 138 34 56 chr13 87115547 87116181 -33168131 - L1_Mus3 LINE L1 -1591 4295 3668 1 1249 6049 143 10 53 chr13 87116174 87116388 -33167924 - L1_Mus3 LINE L1 -3528 2358 2155 1 1249 991 116 7 0 chr13 87116388 87116534 -33167778 - B1_Mus2 SINE Alu 0 147 1 1 1249 6049 133 21 39 chr13 87116534 87117729 -33166583 - L1_Mus3 LINE L1 -3732 2154 985 1 1249 465 19 0 0 chr13 87117731 87117785 -33166527 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1249 5860 131 13 28 chr13 87117789 87118757 -33165555 - L1_Mus4 LINE L1 -28 6608 5655 1 1249 3061 176 11 2 chr13 87118759 87119301 -33165011 + L1_Mus4 LINE L1 5103 5649 -234 1 1249 3995 197 101 12 chr13 87119296 87120205 -33164107 - L1_Mus3 LINE L1 -5990 994 5 1 1249 297 130 0 0 chr13 87120222 87120237 -33164075 + (T)n Simple_repeat Simple_repeat 1 15 0 1 1249 7151 132 16 6 chr13 87120237 87121406 -33162906 - Lx3_Mus LINE L1 0 7009 5829 1 1249 297 130 0 0 chr13 87121406 87121444 -33162868 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1249 6818 107 28 5 chr13 87121573 87122870 -33161442 - L1_Mus2 LINE L1 0 6566 5251 1 1249 480 35 0 0 chr13 87122870 87122928 -33161384 + (TA)n Simple_repeat Simple_repeat 2 59 0 1 1249 4867 141 35 0 chr13 87122928 87123096 -33161216 - L1_Mus2 LINE L1 -633 5250 5061 1 1249 8654 118 13 38 chr13 87123091 87124398 -33159914 + L1_Mus2 LINE L1 3657 4939 -944 1 1249 548 182 15 15 chr13 87124398 87124532 -33159780 - Lx3_Mus LINE L1 -10 6999 6866 1 1249 8654 118 13 38 chr13 87124532 87124682 -33159630 + L1_Mm LINE L1 4940 5077 -806 1 1249 3462 135 16 0 chr13 87124678 87125248 -33159064 - L1_Mur1 LINE L1 -42 5844 5266 1 1249 234 119 50 17 chr13 87125824 87125884 -33158428 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1249 8981 55 1 0 chr13 87127190 87128308 -33156004 - L1Md_F2 LINE L1 0 5883 4765 1 1249 5459 49 4 12 chr13 87128308 87128995 -33155317 + L1Md_F2 LINE L1 5889 6570 -12 1 1249 251 138 22 22 chr13 87129052 87129141 -33155171 + T-rich Low_complexity Low_complexity 2 90 0 1 1249 777 171 57 0 chr13 87129142 87129282 -33155030 - B1_Mus1 SINE Alu 0 148 1 1 1249 189 0 0 0 chr13 87129301 87129322 -33154990 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1249 283 154 21 21 chr13 87130277 87130370 -33153942 + A-rich Low_complexity Low_complexity 3 95 0 1 1249 333 47 0 0 chr13 87130705 87130748 -33153564 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1 1249 1865 206 3 3 chr13 87130759 87131139 -33153173 - Lx LINE L1 -7 6647 6268 1 1249 1204 185 72 34 chr13 87131155 87131486 -33152826 + Lx2 LINE L1 5648 6051 -930 1 1249 1846 166 69 3 chr13 87131486 87131878 -33152434 + Lx2 LINE L1 6579 6996 -1 1 1249 961 162 53 40 chr13 87131878 87132082 -33152230 + Lx2 LINE L1 6052 6183 -798 1 1249 207 0 0 0 chr13 87132472 87132495 -33151817 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1249 1867 233 125 18 chr13 87132580 87132817 -33151495 - RLTR20B2 LTR ERVK -3 557 314 1 1249 450 0 0 0 chr13 87132817 87132867 -33151445 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1249 1867 233 125 18 chr13 87132867 87133132 -33151180 - RLTR20B2 LTR ERVK -247 313 2 1 1249 2962 93 9 0 chr13 87133252 87133655 -33150657 - Lx LINE L1 -1722 5751 5345 1 1249 6468 78 7 5 chr13 87133643 87134497 -33149815 + L1_Mus2 LINE L1 5710 6565 -1 1 1249 202 29 0 54 chr13 87134505 87134542 -33149770 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1 1249 364 252 16 16 chr13 87134765 87134890 -33149422 + Lx9 LINE L1 7301 7425 -219 1 1249 378 0 0 0 chr13 87134923 87134965 -33149347 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1249 640 335 77 0 chr13 87135719 87135952 -33148360 + RMER1A Other Other 46 296 -734 1 1249 2810 258 81 25 chr13 87135922 87136838 -33147474 + RMER1A Other Other 11 1024 -6 1 1249 207 0 0 0 chr13 87137434 87137457 -33146855 + (TAG)n Simple_repeat Simple_repeat 2 24 0 1 1249 369 62 0 0 chr13 87138105 87138153 -33146159 + (TG)n Simple_repeat Simple_repeat 1 48 0 1 1249 376 347 23 39 chr13 87138180 87138309 -33146003 - RSINE1 SINE B4 -35 130 4 1 1249 324 0 0 0 chr13 87139534 87139570 -33144742 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 2 1249 1179 63 23 11 chr13 87139570 87139747 -33144565 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2 1249 247 162 59 0 chr13 87140028 87140096 -33144216 + GA-rich Low_complexity Low_complexity 1 72 0 2 1249 1004 96 14 7 chr13 87140133 87140280 -33144032 + B1_Mus1 SINE Alu 1 148 0 2 1249 369 0 0 0 chr13 87140313 87140354 -33143958 + (GA)n Simple_repeat Simple_repeat 1 41 0 2 1249 22 35 0 0 chr13 87140355 87140384 -33143928 + AT_rich Low_complexity Low_complexity 1 29 0 2 1249 183 254 30 60 chr13 87140747 87140814 -33143498 - L3 LINE CR1 -2299 2190 2126 2 1249 1870 158 25 14 chr13 87141640 87142000 -33142312 + RLTR9A LTR ERVK 5 368 0 2 1249 180 0 0 0 chr13 87142328 87142348 -33141964 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 2 1249 6367 204 87 95 chr13 87142411 87143944 -33140368 + RMER16-int LTR ERVK 1193 2755 -3053 2 1249 216 0 0 0 chr13 87143944 87143968 -33140344 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1249 1035 83 0 0 chr13 87143968 87144101 -33140211 - B1_Mm SINE Alu -13 134 2 2 1249 11458 158 69 86 chr13 87144101 87145651 -33138661 + RMER16-int LTR ERVK 1571 3530 -2278 2 1249 3018 62 23 3 chr13 87145651 87146039 -33138273 + MTA_Mm LTR MaLR 1 396 0 2 1249 11458 157 69 86 chr13 87146039 87147064 -33137248 + RMER16-int LTR ERVK 3079 4080 -1326 2 1249 369 0 0 0 chr13 87147064 87147105 -33137207 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2 1249 1020 93 22 0 chr13 87147107 87147246 -33137066 - B1_Mus1 SINE Alu -6 142 1 2 1249 11458 157 69 86 chr13 87147246 87147341 -33136971 + RMER16-int LTR ERVK 4081 4176 -1230 2 1249 329 286 47 9 chr13 87147354 87147460 -33136852 + ETnERV2-int LTR ERVK 6102 6211 -1195 2 1249 277 243 194 28 chr13 87147557 87147701 -33136611 + ETnERV2-int LTR ERVK 6255 6422 -984 2 1249 322 216 27 13 chr13 87147910 87147985 -33136327 + ETnERV2-int LTR ERVK 7330 7405 -1 2 1249 1940 134 24 38 chr13 87147988 87148359 -33135953 + RLTR9A LTR ERVK 3 368 0 2 1249 4634 184 76 10 chr13 87148675 87150378 -33133934 - Lx2A LINE L1 -8 7000 5129 2 1249 4142 123 65 40 chr13 87150378 87151183 -33133129 - RLTR13D4 LTR ERVK 0 1033 1 2 1249 7938 249 48 92 chr13 87151183 87153803 -33130509 - Lx2A LINE L1 -743 5143 2689 2 1249 315 121 0 0 chr13 87153803 87153861 -33130451 - Lx LINE L1 -7 6647 6590 2 1249 7938 233 36 56 chr13 87153861 87155781 -33128531 - Lx2A LINE L1 -3198 2688 782 2 1249 26 74 0 0 chr13 87156005 87156059 -33128253 + AT_rich Low_complexity Low_complexity 1 54 0 2 1249 2615 238 47 20 chr13 87156323 87156959 -33127353 + Lx2B LINE L1 6343 6995 -5 2 1249 1582 233 66 71 chr13 87156960 87157523 -33126789 - L1_Mur3 LINE L1 -565 5315 4756 2 1249 203 189 0 0 chr13 87157532 87157569 -33126743 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1249 669 189 38 8 chr13 87157570 87157703 -33126609 + Lx2B LINE L1 6560 6696 -304 2 1249 774 291 49 40 chr13 87157710 87158139 -33126173 - Lx9 LINE L1 -130 7514 7082 2 1249 410 333 29 0 chr13 87158190 87158328 -33125984 - Lx9 LINE L1 -865 6779 6638 2 1249 3159 133 0 0 chr13 87158486 87158952 -33125360 + Lx LINE L1 5744 6209 -445 2 1249 185 59 59 0 chr13 87158954 87158988 -33125324 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 2 1249 29 0 0 0 chr13 87159199 87159228 -33125084 + AT_rich Low_complexity Low_complexity 1 29 0 2 1249 1103 237 46 27 chr13 87159786 87160122 -33124190 - ORR1C2 LTR MaLR 0 384 12 2 1249 6781 162 16 17 chr13 87160153 87161094 -33123218 - Lx3C LINE L1 -7 6969 6044 2 1249 219 36 0 0 chr13 87161094 87161122 -33123190 + (TCCC)n Simple_repeat Simple_repeat 1 28 0 2 1249 6781 162 16 17 chr13 87161122 87161402 -33122910 - Lx3C LINE L1 -933 6043 5750 2 1249 495 329 59 46 chr13 87161426 87161732 -33122580 - Lx8 LINE L1 -83 7390 7081 2 1249 240 240 80 0 chr13 87161737 87161787 -33122525 + B3A SINE B2 97 150 -48 2 1249 391 231 0 52 chr13 87161876 87162031 -33122281 - Lx9 LINE L1 -1 7643 7497 2 1249 496 331 35 35 chr13 87162030 87162287 -33122025 + Lx9 LINE L1 7217 7473 -171 2 156 7437 81 1 1 chr13 87162394 87163697 -33120615 + L1_Mus2 LINE L1 5264 6565 -1 2 1250 198 103 0 0 chr13 87163703 87163732 -33120580 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1250 664 256 178 35 chr13 87163732 87163991 -33120321 + MTC LTR MaLR 68 363 -58 2 1250 26 64 0 0 chr13 87164497 87164544 -33119768 + AT_rich Low_complexity Low_complexity 1 47 0 2 1250 1670 191 18 100 chr13 87165559 87165960 -33118352 + ORR1B1 LTR MaLR 27 394 0 2 1250 605 317 126 57 chr13 87166226 87166466 -33117846 - MTC LTR MaLR -2 419 172 2 1250 529 135 0 0 chr13 87166466 87166562 -33117750 - Lx2 LINE L1 0 6997 6902 2 1250 605 317 126 57 chr13 87166562 87166709 -33117603 - MTC LTR MaLR -250 171 5 2 1250 21 89 0 0 chr13 87166747 87166803 -33117509 + AT_rich Low_complexity Low_complexity 1 56 0 2 1250 2707 123 19 11 chr13 87166942 87167497 -33116815 - Lx3B LINE L1 -959 6014 5443 2 1250 1211 191 9 0 chr13 87167498 87167723 -33116589 + Lx3B LINE L1 6048 6274 -699 2 1250 944 243 65 16 chr13 87167727 87167974 -33116338 - Lx2B LINE L1 -130 6870 6612 2 1250 592 156 0 18 chr13 87167968 87168079 -33116233 + L1_Mur2 LINE L1 4273 4381 -1496 2 1250 22 0 0 0 chr13 87169782 87169804 -33114508 + AT_rich Low_complexity Low_complexity 1 22 0 2 1250 21 0 0 0 chr13 87170831 87170852 -33113460 + AT_rich Low_complexity Low_complexity 1 21 0 2 1250 606 340 84 33 chr13 87171409 87171838 -33112474 - MLT1J-int LTR MaLR -590 797 347 2 1250 203 273 73 29 chr13 87172586 87172654 -33111658 + MIRb SINE MIR 25 95 -173 2 1250 27 62 0 0 chr13 87173135 87173183 -33111129 + AT_rich Low_complexity Low_complexity 1 48 0 2 1250 23 0 0 0 chr13 87173207 87173230 -33111082 + AT_rich Low_complexity Low_complexity 1 23 0 2 1250 856 234 107 71 chr13 87174568 87174932 -33109380 + RMER10A LTR ERVL 1 377 -65 2 1250 228 67 0 0 chr13 87174970 87175000 -33109312 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 1250 403 324 50 48 chr13 87177314 87177562 -33106750 + MLT1A1 LTR MaLR 128 367 -41 2 1250 369 0 0 0 chr13 87177571 87177612 -33106700 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1250 585 0 0 0 chr13 87177612 87177676 -33106636 + (GA)n Simple_repeat Simple_repeat 2 66 0 2 1250 27 49 0 0 chr13 87178257 87178298 -33106014 + AT_rich Low_complexity Low_complexity 1 41 0 2 1250 4146 49 15 6 chr13 87178298 87178827 -33105485 - L1Md_F2 LINE L1 -14 6568 6035 2 1250 3189 116 4 6 chr13 87178909 87179386 -33104926 - L1_Mus2 LINE L1 0 6566 6091 2 1250 744 124 0 0 chr13 87179386 87179499 -33104813 + L1_Mus2 LINE L1 5964 6076 -490 2 1250 463 279 31 8 chr13 87179925 87180055 -33104257 - B1_Mur1 SINE Alu -1 148 16 2 1250 1031 320 15 12 chr13 87180123 87180461 -33103851 - L1_Mur3 LINE L1 -7356 356 18 2 1250 1220 243 52 58 chr13 87180456 87180937 -33103375 - L1_Rod LINE L1 -3447 2400 1923 2 1250 393 274 73 17 chr13 87180946 87181081 -33103231 - B1_Mur4 SINE Alu -1 149 2 2 1250 1239 249 110 25 chr13 87181084 87181640 -33102672 - L1_Rod LINE L1 -3918 1929 1327 2 1250 351 0 0 0 chr13 87181643 87181682 -33102630 + (TTG)n Simple_repeat Simple_repeat 1 39 0 2 1250 3094 107 16 2 chr13 87181691 87182142 -33102170 - L1_Mus4 LINE L1 -388 6248 5792 2 1250 1221 101 28 62 chr13 87182141 87182352 -33101960 - L1_Mus3 LINE L1 -76 6560 6357 2 1250 276 121 0 0 chr13 87182350 87182408 -33101904 + L1_Mus3 LINE L1 6579 6636 -2 2 1250 307 241 83 41 chr13 87182427 87182548 -33101764 - L1_Rod LINE L1 -6297 1311 1186 2 1250 216 163 0 0 chr13 87182562 87182605 -33101707 + (TA)n Simple_repeat Simple_repeat 1 43 0 2 1250 693 313 31 51 chr13 87182691 87182984 -33101328 - MT2B LTR ERVL -37 564 278 2 1250 1669 281 147 5 chr13 87183151 87183230 -33101082 - L1_Rod LINE L1 -6403 1205 1121 2 1250 645 86 0 0 chr13 87183230 87183323 -33100989 + (TG)n Simple_repeat Simple_repeat 2 94 0 2 1250 1669 281 147 5 chr13 87183323 87183837 -33100475 - L1_Rod LINE L1 -6488 1120 529 2 1250 216 0 0 0 chr13 87183843 87183867 -33100445 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1250 227 395 13 13 chr13 87183970 87184119 -33100193 - L1_Rod LINE L1 -6961 647 499 2 1250 276 77 0 0 chr13 87185394 87185433 -33098879 + (TTTTTA)n Simple_repeat Simple_repeat 4 42 0 2 1250 1852 160 13 3 chr13 87185561 87185868 -33098444 - Lx LINE L1 -7 6647 6338 2 1250 226 184 0 0 chr13 87185871 87185909 -33098403 + RLTR13D3 LTR ERVK 1 38 -1076 2 1250 232 111 0 0 chr13 87186367 87186403 -33097909 + B3A SINE B2 1 36 -162 2 1250 342 234 45 13 chr13 87186694 87186816 -33097496 + RLTR13D3 LTR ERVK 983 1072 -42 2 1250 4681 117 57 5 chr13 87186831 87187749 -33096563 - Lx LINE L1 -314 6340 5379 2 1250 297 285 60 75 chr13 87187770 87187903 -33096409 - RMER15 LTR ERVL -116 459 329 2 1250 287 292 34 42 chr13 87188120 87188238 -33096074 + RMER10B LTR ERVL 272 388 -10 2 1250 1483 324 78 58 chr13 87188596 87189603 -33094709 - RMER15-int LTR ERVL 0 4999 3973 2 1250 1774 252 41 73 chr13 87189617 87190151 -33094161 + RMER15 LTR ERVL 1 517 -58 2 1250 748 294 28 5 chr13 87190174 87190386 -33093926 + RMER15-int LTR ERVL 1 217 -4782 2 1250 388 58 0 0 chr13 87190433 87190485 -33093827 + URR1B DNA MER1_type 173 224 -1 2 1250 241 256 43 75 chr13 87190485 87190527 -33093785 - CYRA11_Mm Unknown Y-chromosome -442 175 137 2 1250 618 293 11 16 chr13 87190534 87190725 -33093587 + RMER15-int LTR ERVL 4352 4541 -458 2 1250 255 297 86 20 chr13 87191045 87191196 -33093116 + RMER15-int LTR ERVL 803 963 -4036 2 1250 421 258 20 20 chr13 87191214 87191313 -33092999 + RMER15-int LTR ERVL 4375 4473 -526 2 1250 362 247 34 0 chr13 87191311 87191400 -33092912 + RMER15-int LTR ERVL 978 1069 -3930 2 1250 886 334 54 13 chr13 87191421 87191882 -33092430 + RMER15-int LTR ERVL 1129 1608 -3391 2 1250 452 219 38 0 chr13 87191913 87192018 -33092294 + URR1A DNA MER1_type 46 154 -72 2 1250 4011 159 44 0 chr13 87192098 87192785 -33091527 - Lx2 LINE L1 -12 6985 6269 2 1250 10409 65 5 0 chr13 87192785 87194142 -33090170 + L1Md_F3 LINE L1 4223 5586 -297 2 1250 8134 40 3 0 chr13 87194143 87195121 -33089191 + L1Md_F3 LINE L1 5588 6568 -16 2 1250 352 62 0 0 chr13 87195136 87195227 -33089085 + L1Md_F3 LINE L1 6519 6584 0 2 1250 8346 138 22 67 chr13 87195256 87196057 -33088255 - RMER16-int LTR ERVK -3918 1488 678 2 1250 612 0 0 0 chr13 87196057 87196125 -33088187 + (TC)n Simple_repeat Simple_repeat 1 68 0 2 1250 8346 138 22 67 chr13 87196125 87196170 -33088142 - RMER16-int LTR ERVK -4729 677 632 2 1250 365 52 17 0 chr13 87196170 87196228 -33088084 - B2_Mm1t SINE B2 -6 187 129 2 1250 8346 138 22 67 chr13 87196228 87196740 -33087572 - RMER16-int LTR ERVK -4729 631 107 2 1250 1067 108 0 0 chr13 87196740 87196888 -33087424 + B1_Mus1 SINE Alu 1 148 0 2 1250 8346 138 22 67 chr13 87196888 87197028 -33087284 - RMER16-int LTR ERVK -5300 106 3 2 1250 2568 171 20 11 chr13 87197028 87197513 -33086799 - RMER16 LTR ERVK 0 533 1 2 1250 398 357 132 0 chr13 87197668 87197881 -33086431 + RMER15 LTR ERVL 326 566 -9 2 1250 29 28 0 0 chr13 87197913 87197949 -33086363 + AT_rich Low_complexity Low_complexity 1 36 0 2 1250 252 319 53 0 chr13 87197986 87198080 -33086232 - L1MCa LINE L1 -6377 131 33 2 1250 3475 23 2 0 chr13 87199136 87199531 -33084781 - MTA_Mm LTR MaLR 0 396 1 2 1250 26 74 0 0 chr13 87199647 87199701 -33084611 + AT_rich Low_complexity Low_complexity 1 54 0 2 1250 1251 273 60 44 chr13 87199756 87200314 -33083998 + RLTR20C LTR ERVK 13 562 -1 2 1250 270 0 0 0 chr13 87200415 87200445 -33083867 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1250 875 213 63 8 chr13 87200522 87200759 -33083553 + Lx7 LINE L1 7447 7696 0 2 1250 2642 57 0 0 chr13 87201334 87201667 -33082645 - L1Md_F2 LINE L1 -12 6570 6238 2 1250 761 133 68 19 chr13 87202754 87202915 -33081397 + L1_Mur2 LINE L1 1384 1552 -4325 2 1250 2082 104 3 69 chr13 87203482 87203843 -33080469 - IAPLTR1a_Mm LTR ERVK 0 337 1 3 1250 57953 11 4 2 chr13 87203843 87210314 -33073998 - IAPEz-int LTR ERVK 0 6481 1 3 1250 2059 92 3 71 chr13 87210315 87210665 -33073647 - IAPLTR1a_Mm LTR ERVK -11 326 1 3 1250 353 246 83 131 chr13 87210757 87210973 -33073339 - L1_Rod LINE L1 -2916 2931 2728 3 1250 387 0 0 0 chr13 87210973 87211016 -33073296 + (TC)n Simple_repeat Simple_repeat 2 44 0 3 1250 468 0 0 0 chr13 87211016 87211067 -33073245 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1250 353 246 83 131 chr13 87211067 87211139 -33073173 - L1_Rod LINE L1 -3120 2727 2657 3 1250 183 80 0 0 chr13 87211236 87211261 -33073051 + (GGA)n Simple_repeat Simple_repeat 2 26 0 3 1250 506 16 16 0 chr13 87211261 87211324 -33072988 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 1250 2095 264 39 52 chr13 87211324 87212839 -33071473 - L1_Rod LINE L1 -4069 1778 465 3 1250 14373 182 103 22 chr13 87213539 87215684 -33068628 - Lx LINE L1 0 6654 4537 3 1250 707 145 17 0 chr13 87215684 87215801 -33068511 - PB1D9 SINE Alu 0 120 2 3 1250 14373 198 180 28 chr13 87215801 87218420 -33065892 - Lx LINE L1 -1350 4536 1265 3 1250 6324 55 4 2 chr13 87218420 87219217 -33065095 - L1Md_F2 LINE L1 0 6582 5785 3 1250 14373 118 45 48 chr13 87219217 87219555 -33064757 - Lx LINE L1 -4622 1264 926 3 1250 217 279 8 75 chr13 87219960 87220080 -33064232 - BC1_Mm scRNA scRNA -18 134 23 3 1250 224 354 0 10 chr13 87220895 87220995 -33063317 - PB1D9 SINE Alu 0 120 22 3 1250 35 0 0 0 chr13 87221126 87221161 -33063151 + AT_rich Low_complexity Low_complexity 1 35 0 3 1250 828 69 0 23 chr13 87221161 87221294 -33063018 - L1Md_F2 LINE L1 -1 6581 6452 3 1250 429 341 83 15 chr13 87221473 87221798 -33062514 + Lx8 LINE L1 6820 7166 -307 3 1250 21 89 0 0 chr13 87222128 87222184 -33062128 + AT_rich Low_complexity Low_complexity 1 56 0 3 1250 2611 178 2 11 chr13 87222232 87222703 -33061609 + L1_Mur1 LINE L1 5418 5884 -2 3 1250 4195 173 51 4 chr13 87222702 87223493 -33060819 + Lx3B LINE L1 6143 6970 -3 3 1250 25 99 0 0 chr13 87223628 87223709 -33060603 + AT_rich Low_complexity Low_complexity 1 81 0 3 1250 351 374 88 42 chr13 87224081 87224388 -33059924 - MT2A LTR ERVL -74 459 139 3 1250 469 293 60 5 chr13 87224583 87224782 -33059530 - MERVL-int LTR ERVL -1657 4104 3895 3 1250 338 266 28 92 chr13 87224994 87225135 -33059177 - MTE-int LTR MaLR -824 756 625 3 1250 6868 109 4 11 chr13 87225201 87226726 -33057586 - L1_Mus2 LINE L1 0 6566 5052 3 1250 1214 207 23 9 chr13 87226726 87227101 -33057211 - L1Md_F LINE L1 -5730 994 678 3 1250 233 304 49 0 chr13 87227171 87227273 -33057039 - L1VL2 LINE L1 -6218 117 11 3 1250 8568 17 0 0 chr13 87227273 87228238 -33056074 - MERVL-int LTR ERVL -2515 2970 2006 3 1250 888 273 61 80 chr13 87228240 87228602 -33055710 - L1VL1 LINE L1 -6066 356 2 3 1250 500 30 15 0 chr13 87228610 87228676 -33055636 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1250 337 0 20 40 chr13 87229098 87229148 -33055164 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 3 1250 252 130 0 0 chr13 87229567 87229613 -33054699 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1250 331 333 71 57 chr13 87229653 87229793 -33054519 - ID_B1 SINE B4 -2 222 81 3 1250 442 349 0 0 chr13 87230525 87230657 -33053655 + RSINE1 SINE B4 5 136 -29 3 1250 180 0 0 0 chr13 87230690 87230710 -33053602 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3 1250 477 0 0 0 chr13 87230742 87230795 -33053517 + (TA)n Simple_repeat Simple_repeat 1 53 0 3 1250 929 154 11 0 chr13 87231131 87231306 -33053006 + CT-rich Low_complexity Low_complexity 3 179 0 3 1250 1142 101 0 21 chr13 87231313 87231506 -33052806 - L1_Mus4 LINE L1 -1 6635 6447 3 1250 1439 108 5 5 chr13 87231518 87231723 -33052589 - L1_Mus4 LINE L1 -368 6268 6064 3 1250 180 0 0 0 chr13 87232051 87232071 -33052241 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 3 1250 364 20 0 20 chr13 87232088 87232139 -33052173 - B1_Mus2 SINE Alu 0 147 98 3 1250 24 0 0 0 chr13 87232739 87232763 -33051549 + AT_rich Low_complexity Low_complexity 1 24 0 3 1250 31 76 0 0 chr13 87234212 87234278 -33050034 + AT_rich Low_complexity Low_complexity 1 66 0 3 1250 501 353 118 46 chr13 87234524 87234913 -33049399 + MTD LTR MaLR 3 419 0 3 1250 5003 156 24 8 chr13 87235108 87235992 -33048320 - Lx3A LINE L1 -5 6976 6079 3 1250 7088 132 26 9 chr13 87235996 87236847 -33047465 - Lx3A LINE L1 -198 6783 5915 3 1250 314 23 0 23 chr13 87236847 87236891 -33047421 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3 1250 11927 106 45 85 chr13 87236891 87238480 -33045832 - Lx3A LINE L1 -1067 5914 4272 3 1250 984 108 7 0 chr13 87238480 87238619 -33045693 - B1_Mm SINE Alu -1 146 7 3 1250 432 244 7 102 chr13 87238513 87238650 -33045662 - MT2B LTR ERVL -337 264 141 3 1250 11927 106 45 85 chr13 87238650 87239232 -33045080 - Lx3A LINE L1 -1067 4271 3668 3 1250 5131 134 22 3 chr13 87239225 87239610 -33044702 - L1_Mur1 LINE L1 -3528 2358 1971 3 1250 220 27 0 51 chr13 87239610 87239649 -33044663 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 3 1250 5131 134 22 3 chr13 87239649 87240181 -33044131 - L1_Mur1 LINE L1 -3916 1970 1425 3 1250 5640 124 14 0 chr13 87240184 87241045 -33043267 - L1_Mus4 LINE L1 -111 6525 5653 3 1250 3047 174 5 4 chr13 87241039 87241591 -33042721 + L1_Mus4 LINE L1 5098 5650 -233 3 1250 2822 219 40 45 chr13 87241585 87242507 -33041805 - L1_Mur1 LINE L1 -5990 994 3 3 1250 6135 123 24 7 chr13 87242537 87243508 -33040804 - Lx3_Mus LINE L1 0 7009 6023 3 1250 16120 114 8 20 chr13 87243508 87246186 -33038126 - L1_Mur1 LINE L1 -1269 4617 1971 3 1250 1737 211 173 48 chr13 87246170 87246712 -33037600 - L1_Mur1 LINE L1 -6368 616 7 3 1250 359 304 84 42 chr13 87247018 87247279 -33037033 - Lx9 LINE L1 -474 7170 6899 3 1250 204 178 13 27 chr13 87247490 87247565 -33036747 + (TA)n Simple_repeat Simple_repeat 2 75 0 3 1250 273 57 0 0 chr13 87247896 87247931 -33036381 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3 1250 5406 241 58 5 chr13 87247948 87249233 -33035079 - Lx5 LINE L1 -47 7003 5652 3 1250 2453 228 54 21 chr13 87249237 87249757 -33034555 + RLTR20A LTR ERVK 1 537 -4 3 1250 3153 230 30 10 chr13 87249759 87250548 -33033764 - Lx5 LINE L1 -229 5648 4844 3 1250 34971 76 2 6 chr13 87250538 87256686 -33027626 - L1Md_F3 LINE L1 -14 6570 452 3 1250 862 228 102 54 chr13 87256694 87256898 -33027414 - Lx5 LINE L1 -1015 4862 4634 3 1250 630 0 0 0 chr13 87256898 87256968 -33027344 + (TTTC)n Simple_repeat Simple_repeat 3 72 0 3 1250 862 228 102 54 chr13 87256968 87257116 -33027196 - Lx5 LINE L1 -1244 4633 4493 3 1250 240 353 10 19 chr13 87257179 87257283 -33027029 - RLTR26 LTR ERVK -372 270 168 3 1250 7216 194 126 55 chr13 87257425 87259600 -33024712 - Lx5 LINE L1 -1815 4062 1734 3 1250 459 312 104 25 chr13 87259606 87259846 -33024466 - Lx3C LINE L1 -6 6970 6712 3 1250 2919 195 37 3 chr13 87259846 87260515 -33023797 + L1_Mur2 LINE L1 2717 3408 -2469 3 1250 1561 207 35 2 chr13 87260521 87260918 -33023394 - Lx5 LINE L1 -4131 1746 1337 3 1250 598 271 24 17 chr13 87260920 87261187 -33023125 - Lx5 LINE L1 -5947 1139 817 3 1250 244 192 205 0 chr13 87261383 87261461 -33022851 + Lx7 LINE L1 7603 7696 0 3 1250 313 58 19 19 chr13 87261857 87261910 -33022402 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 3 1250 633 61 0 0 chr13 87262005 87262087 -33022225 + (TTTC)n Simple_repeat Simple_repeat 3 84 0 3 1250 25 51 0 0 chr13 87263906 87263945 -33020367 + AT_rich Low_complexity Low_complexity 1 39 0 3 1250 462 318 60 60 chr13 87264658 87264942 -33019370 + Lx9 LINE L1 7122 7405 -239 3 1250 26 0 0 0 chr13 87264973 87264999 -33019313 + AT_rich Low_complexity Low_complexity 1 26 0 3 1250 487 173 9 9 chr13 87265085 87265196 -33019116 + (TA)n Simple_repeat Simple_repeat 2 112 0 3 1250 782 292 134 21 chr13 87265197 87265702 -33018610 + Lx6 LINE L1 6492 7434 -26 3 1250 342 80 0 0 chr13 87265776 87265826 -33018486 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1250 1084 257 95 87 chr13 87266648 87267133 -33017179 + RMER1B Other Other 50 538 -528 3 1250 527 279 68 44 chr13 87267223 87267471 -33016841 - RLTR12B LTR ERVK -6 522 269 3 1250 606 321 60 36 chr13 87267520 87267801 -33016511 - RLTR12B LTR ERVK -195 333 46 3 1250 1544 289 61 55 chr13 87267833 87268687 -33015625 + RMER1B Other Other 1 1055 -11 3 1250 1012 125 0 0 chr13 87268968 87269112 -33015200 - B1_Mus1 SINE Alu -4 144 1 3 1250 225 0 0 0 chr13 87269143 87269168 -33015144 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1250 911 130 0 41 chr13 87269168 87269337 -33014975 + L1_Mus3 LINE L1 6472 6633 -5 3 1250 30 45 0 0 chr13 87270085 87270129 -33014183 + AT_rich Low_complexity Low_complexity 1 44 0 3 1250 27 0 0 0 chr13 87270229 87270256 -33014056 + AT_rich Low_complexity Low_complexity 1 27 0 3 1250 22 70 0 0 chr13 87270674 87270717 -33013595 + AT_rich Low_complexity Low_complexity 1 43 0 3 1250 531 82 0 0 chr13 87271740 87271813 -33012499 + (CA)n Simple_repeat Simple_repeat 2 74 0 3 1250 1170 223 51 48 chr13 87272039 87272392 -33011920 - RLTR15 LTR ERVK -5 354 1 3 1250 1366 218 14 34 chr13 87272473 87272686 -33011626 - MYSERV6-int LTR ERVK -54 8905 8699 3 1250 2984 54 12 30 chr13 87272686 87273088 -33011224 + MTA_Mm LTR MaLR 2 396 0 3 1250 1366 218 14 34 chr13 87273088 87273230 -33011082 - MYSERV6-int LTR ERVK -261 8698 8557 3 1250 304 324 42 27 chr13 87273255 87273585 -33010727 - MYSERV-int LTR ERVK -6157 393 59 3 1250 338 61 0 20 chr13 87274570 87274620 -33009692 + (TTA)n Simple_repeat Simple_repeat 2 50 0 3 1250 1063 100 0 0 chr13 87274628 87274768 -33009544 - B1_Mus1 SINE Alu -8 140 1 3 1250 272 122 0 0 chr13 87275962 87276003 -33008309 - ID_B1 SINE B4 0 224 184 3 1250 2182 200 114 65 chr13 87276013 87276670 -33007642 + RMER6C LTR ERVK 2 690 0 3 1250 26023 26 1 0 chr13 87277335 87281110 -33003202 - L1Md_T LINE L1 -3 6582 2806 3 1250 25900 14 2 2 chr13 87281108 87284815 -32999497 - L1Md_A LINE L1 0 6582 2878 3 1250 6161 58 19 10 chr13 87284811 87286300 -32998012 - L1Md_T LINE L1 -3986 1900 300 3 1250 678 289 58 12 chr13 87286655 87286914 -32997398 + RLTR42-int LTR ERVK 557 827 -4695 3 1250 3424 229 18 19 chr13 87287174 87287993 -32996319 + RLTR42-int LTR ERVK 2147 2964 -2558 3 1250 741 229 37 45 chr13 87288048 87288317 -32995995 + RLTR42-int LTR ERVK 3982 4248 -1274 3 1250 351 235 38 29 chr13 87288364 87288469 -32995843 + RLTR42-int LTR ERVK 4253 4358 -1164 3 1250 3686 92 8 0 chr13 87288790 87289299 -32995013 - L1_Mus3 LINE L1 -417 6221 5709 3 1250 1599 127 230 0 chr13 87289297 87289628 -32994684 + L1_Mus3 LINE L1 6218 6624 -14 3 1250 824 248 59 47 chr13 87289642 87289963 -32994349 - RLTR6-int LTR ERV1 -134 7644 7320 3 1250 739 174 80 16 chr13 87290071 87290258 -32994054 - RMER16-int LTR ERVK -1706 3700 3502 3 1250 5950 142 60 18 chr13 87290241 87291313 -32992999 - RMER16-int LTR ERVK -2113 3293 2177 3 1250 4042 105 103 0 chr13 87291359 87291980 -32992332 - L1_Mus1 LINE L1 0 6567 5883 3 156 20846 140 62 61 chr13 87291980 87296159 -32988153 - L1_Mm LINE L1 -282 5601 1417 3 1251 29 47 0 0 chr13 87296401 87296444 -32987868 + AT_rich Low_complexity Low_complexity 1 43 0 3 1251 417 116 0 0 chr13 87296527 87296596 -32987716 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1251 228 241 0 0 chr13 87296601 87296659 -32987653 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 1251 423 83 0 0 chr13 87296708 87296768 -32987544 + (TATG)n Simple_repeat Simple_repeat 2 61 0 3 1251 1353 220 41 3 chr13 87296809 87297123 -32987189 - ORR1A2 LTR MaLR -1 326 1 3 1251 7749 184 111 12 chr13 87297123 87298852 -32985460 - ORR1A2-int LTR MaLR 0 1963 64 3 1251 3867 156 1 16 chr13 87299145 87299818 -32984494 - L1_Mus3 LINE L1 -264 5619 4957 4 1251 6767 102 22 11 chr13 87299816 87300807 -32983505 + L1_Mus3 LINE L1 5629 6630 -8 4 1251 27 49 0 0 chr13 87300831 87300872 -32983440 + AT_rich Low_complexity Low_complexity 1 41 0 4 1251 1016 272 55 46 chr13 87300903 87301357 -32982955 + Lx9 LINE L1 7007 7464 -180 4 1251 26 64 0 0 chr13 87301454 87301501 -32982811 + AT_rich Low_complexity Low_complexity 1 47 0 4 1251 931 127 99 51 chr13 87301502 87301834 -32982478 + RLTR42-int LTR ERVK 5433 5780 0 3 1251 3074 220 110 76 chr13 87301836 87302702 -32981610 + RMER19B LTR ERVK 3 897 -5 3 1251 3532 253 76 15 chr13 87302706 87304650 -32979662 - Lx7 LINE L1 -1001 6695 4621 4 1251 4442 139 3 23 chr13 87304749 87305262 -32979050 + L1VL4 LINE L1 256 762 -5540 4 1251 925 146 0 0 chr13 87305262 87305399 -32978913 + B1_Mus1 SINE Alu 3 139 -9 4 1251 304 22 44 0 chr13 87305399 87305444 -32978868 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 4 1251 8397 117 37 12 chr13 87305444 87306977 -32977335 + L1VL4 LINE L1 763 2327 -1232 4 1251 1891 216 81 14 chr13 87306982 87307563 -32976749 - Lx7 LINE L1 -1608 4272 3653 4 1251 619 249 28 93 chr13 87307559 87307882 -32976430 + Lx7 LINE L1 7234 7535 -161 4 1251 3029 199 45 3 chr13 87307897 87308513 -32975799 - Lx2B LINE L1 -5 6995 6354 4 1251 1083 172 21 1 chr13 87308513 87308750 -32975562 + Lx2B LINE L1 5529 5775 -1225 4 1251 2190 212 59 26 chr13 87308750 87309196 -32975116 + RLTR20B2 LTR ERVK 1 466 -94 4 1251 270 0 0 0 chr13 87309196 87309226 -32975086 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1251 2190 212 59 26 chr13 87309226 87309321 -32974991 + RLTR20B2 LTR ERVK 467 560 0 4 1251 2860 30 0 0 chr13 87309559 87309896 -32974416 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1251 7445 21 3 0 chr13 87309896 87310745 -32973567 - IAPEz-int LTR ERVK 0 6481 5630 4 1251 25414 22 32 9 chr13 87310731 87313732 -32970580 - IAPEz-int LTR ERVK -3405 3076 8 4 1251 2860 30 0 0 chr13 87313732 87314069 -32970243 - IAPLTR1a_Mm LTR ERVK 0 337 1 4 1251 5120 195 25 9 chr13 87314242 87315373 -32968939 + MYSERV16_I-int LTR ERVK 1104 2252 -74 4 1251 462 195 11 0 chr13 87315393 87315480 -32968832 + Lx2B LINE L1 6168 6255 -745 4 1251 3369 201 12 30 chr13 87315490 87316290 -32968022 + L1_Mur2 LINE L1 3583 4368 -1509 4 1251 289 316 26 32 chr13 87316293 87316447 -32967865 + Lx7 LINE L1 7544 7696 0 4 1251 407 399 11 5 chr13 87316481 87316670 -32967642 - B4 SINE B4 -98 194 5 4 1251 248 127 0 18 chr13 87316845 87316901 -32967411 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 4 1251 731 275 24 57 chr13 87316936 87317268 -32967044 - L1_Mur3 LINE L1 -1380 4500 4180 4 1251 1772 311 51 18 chr13 87317373 87318390 -32965922 + Lx7 LINE L1 4534 5618 -682 4 1251 731 300 47 7 chr13 87319444 87319719 -32964593 + Lx7 LINE L1 5594 5879 -1817 4 1251 382 264 64 107 chr13 87319732 87319857 -32964455 - MERVL_2A-int LTR ERVL -1836 3925 3819 4 1251 1917 73 10 14 chr13 87319857 87320147 -32964165 - L1Md_F2 LINE L1 -1 6581 6293 4 1251 382 264 64 107 chr13 87320147 87320254 -32964058 - MERVL_2A-int LTR ERVL -1943 3818 3703 4 1251 22 0 0 0 chr13 87320452 87320474 -32963838 + AT_rich Low_complexity Low_complexity 1 22 0 4 1251 13301 132 30 14 chr13 87320489 87324993 -32959319 - L1_Mus3 LINE L1 0 6638 409 4 1251 6391 30 10 1 chr13 87325279 87326057 -32958255 + L1Md_A LINE L1 343 1127 -5597 4 1251 2273 23 0 0 chr13 87326052 87326316 -32957996 - L1_Mus3 LINE L1 -6319 405 142 4 1251 942 9 0 0 chr13 87326312 87326417 -32957895 + L1Md_A LINE L1 5482 5586 -297 4 1251 8987 4 0 0 chr13 87326417 87327413 -32956899 + L1Md_A LINE L1 5587 6582 0 4 1251 8893 14 0 0 chr13 87327413 87328425 -32955887 + L1Md_A LINE L1 4575 5586 -297 4 1251 8612 21 1 0 chr13 87328425 87329418 -32954894 + L1Md_A LINE L1 5587 6580 -2 4 1251 22 35 0 0 chr13 87329592 87329621 -32954691 + AT_rich Low_complexity Low_complexity 1 29 0 4 1251 451 285 32 0 chr13 87329931 87330054 -32954258 + B1_Mus1 SINE Alu 1 127 -21 4 1251 7513 26 1 0 chr13 87330058 87330934 -32953378 + L1Md_T LINE L1 5705 6581 -1 4 1251 29 98 0 0 chr13 87331478 87331570 -32952742 + AT_rich Low_complexity Low_complexity 1 92 0 4 1251 432 242 140 29 chr13 87331776 87332019 -32952293 - Lx9 LINE L1 -10 7634 7365 4 1251 204 97 0 0 chr13 87332593 87332624 -32951688 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1251 441 81 0 0 chr13 87333057 87333119 -32951193 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1251 236 130 0 0 chr13 87333119 87333165 -32951147 - L1_Mur2 LINE L1 -2035 3842 3797 4 1251 418 263 20 89 chr13 87333216 87333335 -32950977 + B3A SINE B2 9 123 -75 4 1251 812 301 77 11 chr13 87333335 87333684 -32950628 + ORR1D1 LTR MaLR 3 374 0 4 1251 418 281 53 86 chr13 87333684 87333776 -32950536 + B3A SINE B2 122 216 0 4 1251 264 287 136 45 chr13 87333848 87334202 -32950110 + Lx7 LINE L1 7311 7696 0 4 1251 22 0 0 0 chr13 87334671 87334693 -32949619 + AT_rich Low_complexity Low_complexity 1 22 0 4 1251 2826 273 68 31 chr13 87334989 87335888 -32948424 + Lx6 LINE L1 6352 7283 -177 4 1251 442 376 48 57 chr13 87336472 87336720 -32947592 + B4 SINE B4 29 274 -18 4 1251 438 120 0 0 chr13 87336752 87336827 -32947485 + (CA)n Simple_repeat Simple_repeat 1 75 0 4 1251 180 125 0 0 chr13 87336828 87336860 -32947452 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 1251 423 98 0 0 chr13 87337468 87337529 -32946783 + (TA)n Simple_repeat Simple_repeat 1 61 0 4 1251 21 0 0 0 chr13 87337535 87337556 -32946756 + AT_rich Low_complexity Low_complexity 1 21 0 4 1251 17210 184 31 40 chr13 87337561 87342378 -32941934 - Lx LINE L1 -2 6652 1884 4 1251 468 202 0 20 chr13 87342415 87342516 -32941796 + RMER3D-int LTR ERVK 1392 1490 -1352 4 1251 1239 204 50 70 chr13 87342513 87342871 -32941441 + MYSERV16_I-int LTR ERVK 581 931 -1395 4 1251 861 169 77 14 chr13 87342908 87343130 -32941182 + MYSERV16_I-int LTR ERVK 1093 1328 -998 4 1251 198 0 0 0 chr13 87343144 87343166 -32941146 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 4 1251 1111 70 0 14 chr13 87343166 87343302 -32941010 - B1_Mm SINE Alu -10 137 2 4 1251 6914 146 5 17 chr13 87343305 87344932 -32939380 - L1_Mus4 LINE L1 -6 6630 5026 4 1251 982 112 0 0 chr13 87344932 87345066 -32939246 - B1_Mus1 SINE Alu -12 136 3 4 1251 4479 186 10 39 chr13 87345066 87345116 -32939196 - L1_Mus4 LINE L1 -858 5025 4979 4 1251 2518 141 30 0 chr13 87345117 87345577 -32938735 + MusHAL1 LINE L1 1897 2370 -342 4 1251 468 91 0 0 chr13 87345955 87346021 -32938291 + (TC)n Simple_repeat Simple_repeat 1 66 0 4 1251 1068 8 0 0 chr13 87346054 87346175 -32938137 + (TTTC)n Simple_repeat Simple_repeat 3 123 0 4 1251 195 42 0 0 chr13 87346651 87346675 -32937637 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 1251 325 270 31 31 chr13 87346722 87346852 -32937460 + MTEa LTR MaLR 250 379 0 4 1251 202 305 0 17 chr13 87346853 87346913 -32937399 + (CATA)n Simple_repeat Simple_repeat 2 60 0 4 1251 1557 263 118 26 chr13 87347765 87348331 -32935981 + RMER19A LTR ERVK 116 733 -4 4 1251 269 271 17 0 chr13 87348338 87348397 -32935915 - URR1B DNA MER1_type -164 61 2 4 1251 592 339 13 8 chr13 87348412 87348650 -32935662 + Lx6 LINE L1 7042 7280 -180 4 1251 428 256 48 38 chr13 87348651 87348918 -32935394 + L1M4 LINE L1 5408 5681 -499 4 1251 249 33 0 0 chr13 87349007 87349037 -32935275 + (CAA)n Simple_repeat Simple_repeat 3 32 0 4 1251 249 243 38 28 chr13 87349038 87349144 -32935168 + A-rich Low_complexity Low_complexity 3 109 0 4 1251 1520 298 53 60 chr13 87349266 87349834 -32934478 - Lx7 LINE L1 -366 7330 6761 4 1251 243 0 0 0 chr13 87349834 87349861 -32934451 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1251 1520 298 53 60 chr13 87349861 87349988 -32934324 - Lx7 LINE L1 -936 6760 6640 4 1251 2164 288 59 42 chr13 87350007 87350975 -32933337 + Lx9 LINE L1 6657 7640 -4 4 1251 24 32 0 0 chr13 87351645 87351676 -32932636 + AT_rich Low_complexity Low_complexity 1 31 0 4 1251 389 307 17 6 chr13 87351982 87352194 -32932118 - L1M2 LINE L1 -593 5704 5491 4 1251 25 31 0 0 chr13 87352243 87352275 -32932037 + AT_rich Low_complexity Low_complexity 1 32 0 4 1251 1365 77 5 10 chr13 87352311 87352508 -32931804 + L1Md_F2 LINE L1 6375 6570 -12 4 1251 231 333 0 0 chr13 87352531 87352597 -32931715 - B3 SINE B2 -81 135 70 4 1251 258 322 89 47 chr13 87353098 87353543 -32930769 + L1MA9 LINE L1 5489 5956 -356 4 1251 296 302 112 0 chr13 87353564 87353769 -32930543 + L1MA9 LINE L1 6000 6227 -85 4 1251 28320 125 15 12 chr13 87354288 87360115 -32924197 - L1_Mus1 LINE L1 -1 6566 725 4 1251 354 302 15 8 chr13 87360123 87360253 -32924059 - L1_Mus1 LINE L1 -5813 803 673 4 1251 273 75 0 0 chr13 87360321 87360361 -32923951 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 4 1251 900 131 29 0 chr13 87360457 87360594 -32923718 + B1_Mus1 SINE Alu 2 142 -6 4 1251 1773 157 6 12 chr13 87360614 87360955 -32923357 - L1_Mur1 LINE L1 -1218 4668 4330 4 1251 730 154 78 60 chr13 87360944 87361110 -32923202 + Lx3A LINE L1 6810 6978 -3 4 1251 333 68 0 0 chr13 87361113 87361157 -32923155 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1251 294 259 11 23 chr13 87361162 87361249 -32923063 + RMER15 LTR ERVL 284 369 -206 4 1251 254 171 17 35 chr13 87361265 87361380 -32922932 + T-rich Low_complexity Low_complexity 1 113 0 4 1251 578 235 29 0 chr13 87361627 87361763 -32922549 - Lx2A LINE L1 0 7008 6869 4 1251 23 0 0 0 chr13 87362009 87362032 -32922280 + AT_rich Low_complexity Low_complexity 1 23 0 4 1251 189 0 0 0 chr13 87362526 87362547 -32921765 + (TTA)n Simple_repeat Simple_repeat 1 21 0 4 1251 8055 45 1 4 chr13 87362547 87363796 -32920516 - L1Md_F2 LINE L1 -23 6559 5314 4 1251 746 59 10 0 chr13 87363794 87363895 -32920417 + L1Md_F2 LINE L1 5203 5304 -579 4 1251 4142 116 125 70 chr13 87363934 87364775 -32919537 - RMER17D LTR ERVK -2 887 1 4 1251 26 74 0 0 chr13 87365026 87365080 -32919232 + AT_rich Low_complexity Low_complexity 1 54 0 4 1251 26 0 0 0 chr13 87365321 87365347 -32918965 + AT_rich Low_complexity Low_complexity 1 26 0 4 1251 918 282 8 101 chr13 87365540 87365708 -32918604 + L1VL4 LINE L1 344 500 -5802 4 1251 309 51 0 0 chr13 87365708 87365747 -32918565 + (ATTG)n Simple_repeat Simple_repeat 2 40 0 4 1251 918 282 8 101 chr13 87365747 87365953 -32918359 + L1VL4 LINE L1 501 683 -5619 4 1251 18202 182 14 102 chr13 87365937 87367453 -32916859 + L1_Mm LINE L1 1312 2817 -3066 4 1251 1533 194 55 77 chr13 87367453 87367855 -32916457 + RLTR9C LTR ERVK 1 393 0 4 1251 18202 182 14 102 chr13 87367855 87369675 -32914637 + L1_Mm LINE L1 2818 4627 -1256 4 1251 215 23 67 22 chr13 87369675 87369720 -32914592 + (CAA)n Simple_repeat Simple_repeat 2 48 0 4 1251 18202 182 14 102 chr13 87369720 87370610 -32913702 + L1_Mm LINE L1 4628 5536 -347 4 1251 1954 177 98 3 chr13 87370611 87370979 -32913333 - RLTR44A LTR ERVK 0 405 3 4 1251 5404 69 0 0 chr13 87370984 87371651 -32912661 - RLTR44-int LTR ERVK -4 2808 2142 4 1251 1105 338 42 41 chr13 87371870 87372791 -32911521 - IAP-d-int LTR ERVK -1434 5108 4187 4 1251 970 85 11 94 chr13 87373289 87373470 -32910842 - RLTR44-int LTR ERVK -1831 981 816 4 1251 23 0 0 0 chr13 87373518 87373541 -32910771 + AT_rich Low_complexity Low_complexity 1 23 0 4 1251 4253 141 25 6 chr13 87374700 87375420 -32908892 + L1_Mus4 LINE L1 5903 6636 0 4 1251 972 304 148 13 chr13 87375969 87376362 -32907950 + RMER15 LTR ERVL 43 488 -87 4 1251 976 288 81 29 chr13 87376496 87377058 -32907254 - ORR1D1-int LTR MaLR -240 1130 820 4 1251 449 253 11 0 chr13 87377051 87377146 -32907166 - ORR1D1 LTR MaLR -278 96 1 4 1251 261 304 51 0 chr13 87377158 87377237 -32907075 + RMER15 LTR ERVL 493 575 0 4 1251 438 65 0 0 chr13 87378243 87378305 -32906007 + (T)n Simple_repeat Simple_repeat 1 62 0 4 1251 1105 88 0 13 chr13 87378313 87378462 -32905850 - B1_Mus2 SINE Alu 0 147 1 5 1251 402 299 16 16 chr13 87378546 87378691 -32905621 + B1_Mur1 SINE Alu 4 148 -1 5 1251 252 366 42 67 chr13 87378779 87378899 -32905413 + B4A SINE B4 9 125 -167 5 1251 242 152 17 0 chr13 87378997 87379056 -32905256 + (TA)n Simple_repeat Simple_repeat 2 61 0 5 1251 459 0 0 0 chr13 87379767 87379818 -32904494 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1251 456 51 0 0 chr13 87379819 87379878 -32904434 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1251 219 227 0 39 chr13 87380023 87380101 -32904211 + CT-rich Low_complexity Low_complexity 3 77 0 5 1251 22 35 0 0 chr13 87380107 87380136 -32904176 + AT_rich Low_complexity Low_complexity 1 29 0 5 1251 186 118 0 0 chr13 87380210 87380244 -32904068 + (TTTTTA)n Simple_repeat Simple_repeat 3 36 0 5 1251 524 118 85 11 chr13 87380403 87380497 -32903815 - MTC LTR MaLR -320 101 1 5 1251 15156 56 2 0 chr13 87380825 87383440 -32900872 - L1Md_F3 LINE L1 -15 6569 3949 5 1251 353 264 65 23 chr13 87383650 87383867 -32900445 - Lx9 LINE L1 -142 7502 7277 5 1251 222 176 0 0 chr13 87384484 87384535 -32899777 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1251 23 97 0 0 chr13 87385316 87385388 -32898924 + AT_rich Low_complexity Low_complexity 1 72 0 5 1251 23 0 0 0 chr13 87385417 87385440 -32898872 + AT_rich Low_complexity Low_complexity 1 23 0 5 1251 681 255 42 21 chr13 87386936 87387176 -32897136 - Lx7 LINE L1 -1 7695 7451 5 1251 2388 134 28 15 chr13 87387178 87387571 -32896741 - RLTR9D LTR ERVK 0 403 6 5 1251 11298 129 10 12 chr13 87387571 87390287 -32894025 + L1VL1 LINE L1 178 2889 -809 5 1251 6978 118 28 4 chr13 87390289 87391803 -32892509 + L1_Mus3 LINE L1 5097 6631 -7 5 1251 282 231 99 27 chr13 87391807 87391918 -32892394 - Lx7 LINE L1 -211 7485 7367 5 1251 698 177 0 6 chr13 87391919 87392078 -32892234 + (TA)n Simple_repeat Simple_repeat 1 158 0 5 1251 270 0 0 0 chr13 87392078 87392108 -32892204 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1251 418 227 0 10 chr13 87392122 87392220 -32892092 - Lx7 LINE L1 -337 7359 7263 5 1251 494 232 10 0 chr13 87392228 87392327 -32891985 + Lx7 LINE L1 7143 7242 -454 5 1251 222 37 0 0 chr13 87392468 87392495 -32891817 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 5 1251 1107 91 0 0 chr13 87392522 87392665 -32891647 + B1_Mus2 SINE Alu 5 147 0 5 1251 1179 117 0 0 chr13 87392687 87392867 -32891445 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1251 1213 7 0 0 chr13 87393150 87393287 -32891025 - B1_Mm SINE Alu -9 138 2 5 1251 319 418 30 54 chr13 87393640 87393807 -32890505 - RSINE1 SINE B4 0 165 3 5 1251 426 320 0 0 chr13 87394140 87394243 -32890069 + URR1B DNA MER1_type 1 103 -122 5 1251 201 188 0 20 chr13 87394352 87394401 -32889911 + (CAAA)n Simple_repeat Simple_repeat 4 51 0 5 1251 799 284 30 33 chr13 87394428 87394727 -32889585 + Lx9 LINE L1 7132 7429 -215 5 1251 322 190 41 0 chr13 87394820 87394941 -32889371 + (TA)n Simple_repeat Simple_repeat 1 126 0 5 1251 315 0 0 0 chr13 87395342 87395377 -32888935 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1251 1008 242 85 52 chr13 87395603 87395908 -32888404 + RMER6C LTR ERVK 1 315 -375 5 1251 2663 97 24 24 chr13 87395908 87396329 -32887983 + BGLII LTR ERVK 1 421 0 5 1251 545 109 43 11 chr13 87396730 87396823 -32887489 + RMER3D-int LTR ERVK 486 581 -2261 5 1251 789 200 0 54 chr13 87396837 87397059 -32887253 + RMER3D-int LTR ERVK 652 861 -1981 5 1251 720 176 66 48 chr13 87397061 87397398 -32886914 + RMER3D-int LTR ERVK 358 837 -2005 5 1251 375 83 0 0 chr13 87397462 87397522 -32886790 + (T)n Simple_repeat Simple_repeat 1 60 0 5 1251 1095 86 0 0 chr13 87397541 87397680 -32886632 - B1_Mus1 SINE Alu -7 141 3 5 1251 1870 171 112 17 chr13 87397713 87398188 -32886124 + RMER3D-int LTR ERVK 1014 1533 -1309 5 1251 640 177 39 58 chr13 87398229 87398385 -32885927 + RMER3D-int LTR ERVK 1542 1694 -1148 5 1251 2882 224 47 45 chr13 87398353 87399298 -32885014 + RMER3D-int LTR ERVK 1891 2836 -6 5 1251 603 100 0 0 chr13 87399306 87399386 -32884926 + BGLII LTR ERVK 3 82 -339 5 1251 1469 97 17 17 chr13 87399368 87399599 -32884713 + BGLII LTR ERVK 191 421 0 5 1251 768 219 126 26 chr13 87399622 87399852 -32884460 + RMER6C LTR ERVK 435 687 -3 5 1251 21 0 0 0 chr13 87399906 87399927 -32884385 + AT_rich Low_complexity Low_complexity 1 21 0 5 1251 1173 55 0 14 chr13 87401053 87401201 -32883111 + B1_Mm SINE Alu 2 147 0 5 1251 354 219 0 0 chr13 87401203 87401308 -32883004 + A-rich Low_complexity Low_complexity 1 105 0 5 1251 4367 135 40 16 chr13 87401400 87402146 -32882166 - Lx LINE L1 0 6654 5891 5 1251 30 45 0 0 chr13 87402289 87402333 -32881979 + AT_rich Low_complexity Low_complexity 1 44 0 5 1251 824 274 113 54 chr13 87402365 87402789 -32881523 + RMER1C Other Other 855 1303 -39 5 1251 417 221 0 0 chr13 87402796 87402900 -32881412 + (TA)n Simple_repeat Simple_repeat 1 104 0 5 1251 1043 296 17 20 chr13 87402900 87403307 -32881005 + Lx7 LINE L1 3680 4085 -1795 5 1251 1468 229 79 15 chr13 87403312 87403834 -32880478 + Lx7 LINE L1 5447 6007 -1689 5 1251 501 284 36 45 chr13 87403834 87404094 -32880218 - MT2A LTR ERVL -101 500 87 5 1251 479 276 0 24 chr13 87404117 87404243 -32880069 - MT2A LTR ERVL -410 123 1 5 1251 1829 296 119 17 chr13 87404243 87405037 -32879275 + Lx7 LINE L1 6013 6887 -809 5 1251 299 216 181 43 chr13 87405120 87405236 -32879076 - RMER13A LTR ERVK -482 378 247 5 1251 2362 224 53 20 chr13 87405268 87405966 -32878346 + Lx2B LINE L1 1405 2125 -3761 5 1251 10095 200 42 20 chr13 87405973 87407115 -32877197 + Lx2B LINE L1 3507 4725 -1152 5 1251 189 0 0 0 chr13 87407115 87407136 -32877176 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 1251 10095 223 28 20 chr13 87407136 87409416 -32874896 + Lx2B LINE L1 4726 6997 -3 5 1251 332 396 36 0 chr13 87409598 87409737 -32874575 - RSINE1 SINE B4 -20 145 2 5 1251 6254 65 10 5 chr13 87409749 87410572 -32873740 - L1Md_F2 LINE L1 -3 6579 5753 5 1251 473 118 33 53 chr13 87410934 87411086 -32873226 + (CAGAGA)n Simple_repeat Simple_repeat 2 150 0 5 1251 207 167 0 0 chr13 87411094 87411136 -32873176 + GA-rich Low_complexity Low_complexity 2 43 0 5 1251 21 36 0 0 chr13 87411190 87411218 -32873094 + AT_rich Low_complexity Low_complexity 1 28 0 5 1251 210 59 37 56 chr13 87411343 87411397 -32872915 + A-rich Low_complexity Low_complexity 2 54 0 5 1251 21 36 0 0 chr13 87411409 87411437 -32872875 + AT_rich Low_complexity Low_complexity 1 28 0 5 1251 1818 310 117 12 chr13 87411451 87412170 -32872142 - Lx6 LINE L1 -11 7449 6656 5 1251 1233 90 0 0 chr13 87412177 87412354 -32871958 + (TTC)n Simple_repeat Simple_repeat 3 179 0 5 1251 1260 89 0 0 chr13 87412356 87412536 -32871776 + (TCC)n Simple_repeat Simple_repeat 1 180 0 5 1251 725 110 0 8 chr13 87412536 87412560 -32871752 + (TTC)n Simple_repeat Simple_repeat 1 24 0 5 1251 1365 61 0 0 chr13 87412560 87412740 -32871572 + (TCC)n Simple_repeat Simple_repeat 1 180 0 5 1251 725 110 0 8 chr13 87412740 87412834 -32871478 + (TTC)n Simple_repeat Simple_repeat 3 96 0 5 1251 21 0 0 0 chr13 87412850 87412871 -32871441 + AT_rich Low_complexity Low_complexity 1 21 0 5 1251 1552 118 80 66 chr13 87412877 87413166 -32871146 - L1_Mus2 LINE L1 -1 6565 6273 5 1251 3219 270 73 18 chr13 87413176 87414177 -32870135 - Lx6 LINE L1 -800 6660 5605 5 1251 13611 63 1 2 chr13 87414213 87416692 -32867620 - L1Md_F2 LINE L1 -2 6580 4104 5 1251 1298 223 71 0 chr13 87416695 87417032 -32867280 - Lx6 LINE L1 -308 5572 5212 5 1251 2685 52 24 27 chr13 87417049 87417422 -32866890 + L1Md_F2 LINE L1 5709 6080 -502 5 1251 24 0 0 0 chr13 87417642 87417666 -32866646 + AT_rich Low_complexity Low_complexity 1 24 0 5 1251 33 25 0 0 chr13 87418719 87418759 -32865553 + AT_rich Low_complexity Low_complexity 1 40 0 5 1251 34283 66 2 2 chr13 87419294 87423383 -32860929 + L1Md_F2 LINE L1 463 4515 -1368 5 1251 3578 49 60 7 chr13 87423383 87423834 -32860478 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1251 34283 51 2 2 chr13 87423834 87424907 -32859405 + L1Md_F2 LINE L1 4516 5586 -297 5 156 7680 65 6 2 chr13 87424908 87425899 -32858413 + L1Md_F2 LINE L1 5588 6582 0 5 1252 1078 164 94 141 chr13 87425926 87426000 -32858312 + L1_Mus3 LINE L1 6364 6438 -216 5 1252 941 133 28 0 chr13 87426000 87426143 -32858169 + B1_Mm SINE Alu 1 147 0 5 1252 1283 108 57 12 chr13 87426143 87426366 -32857946 + L1_Mus3 LINE L1 6417 6647 -7 5 1252 342 209 2 0 chr13 87426975 87427051 -32857261 - Lx3C LINE L1 -550 6450 6374 5 1252 779 129 0 0 chr13 87427056 87427172 -32857140 - Lx3C LINE L1 -1104 5872 5757 5 1252 723 264 12 115 chr13 87427192 87427436 -32856876 + Lx2B LINE L1 6764 6982 -18 5 1252 343 347 0 0 chr13 87427733 87427854 -32856458 - Lx8 LINE L1 -489 6984 6864 5 1252 180 0 0 0 chr13 87427904 87427924 -32856388 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 1252 391 339 31 20 chr13 87427925 87428121 -32856191 - Lx8 LINE L1 -715 6758 6561 5 1252 757 298 209 39 chr13 87428353 87428826 -32855486 - Lx6 LINE L1 -224 7236 6683 5 1252 304 288 83 42 chr13 87428893 87429085 -32855227 - L1MCa LINE L1 -4117 2391 2192 5 1252 2993 140 9 4 chr13 87430833 87431336 -32852976 - Lx2B LINE L1 -1343 5657 5151 5 1252 3792 99 8 2 chr13 87431336 87431870 -32852442 + L1_Mus3 LINE L1 6101 6637 -1 5 1252 1903 213 32 2 chr13 87432401 87432805 -32851507 - Lx4B LINE L1 -364 6694 6279 5 1252 1041 236 90 71 chr13 87432807 87433131 -32851181 + RLTR20B3 LTR ERVK 10 341 -236 5 1252 5536 146 35 12 chr13 87433131 87434067 -32850245 - RMER17B LTR ERVK 0 958 1 5 1252 1041 236 90 71 chr13 87434067 87434107 -32850205 + RLTR20B3 LTR ERVK 342 381 -196 5 1252 773 213 30 84 chr13 87434107 87434404 -32849908 - L1_Mur2 LINE L1 -5976 736 456 5 1252 21 0 0 0 chr13 87434687 87434708 -32849604 + AT_rich Low_complexity Low_complexity 1 21 0 5 1252 276 149 42 21 chr13 87434798 87434894 -32849418 + (TA)n Simple_repeat Simple_repeat 1 98 0 5 1252 248 259 35 0 chr13 87435342 87435427 -32848885 + Lx7 LINE L1 7602 7689 -7 5 1252 447 196 418 0 chr13 87435416 87435605 -32848707 - L1_Mur2 LINE L1 -2689 3188 2921 5 1252 1045 130 43 0 chr13 87435591 87435775 -32848537 - L1_Mur2 LINE L1 -3467 2410 2219 5 1252 2326 289 16 25 chr13 87435776 87436515 -32847797 + Lx5 LINE L1 6354 7058 0 5 1252 22 35 0 0 chr13 87436515 87436544 -32847768 + AT_rich Low_complexity Low_complexity 1 29 0 5 1252 22 0 0 0 chr13 87436692 87436714 -32847598 + AT_rich Low_complexity Low_complexity 1 22 0 5 1252 22 35 0 0 chr13 87436818 87436847 -32847465 + AT_rich Low_complexity Low_complexity 1 29 0 5 1252 2158 248 33 20 chr13 87437849 87438554 -32845758 - L1_Mur3 LINE L1 -520 5360 4647 5 1252 384 22 0 0 chr13 87438566 87438611 -32845701 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1252 1320 320 54 17 chr13 87438619 87439214 -32845098 + Lx7 LINE L1 6604 7220 -476 5 1252 5057 188 77 10 chr13 87439213 87439949 -32844363 + Lx LINE L1 4709 5519 -358 5 1252 2402 65 12 21 chr13 87439949 87440279 -32844033 + IAPLTR2b LTR ERVK 1 327 0 5 1252 5057 139 22 4 chr13 87440279 87440738 -32843574 + Lx LINE L1 5520 5982 -1015 5 1252 4925 128 12 0 chr13 87440735 87441478 -32842834 + L1_Mus3 LINE L1 5876 6627 -11 5 1252 510 17 0 0 chr13 87441494 87441553 -32842759 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1252 1623 136 58 27 chr13 87441559 87441853 -32842459 - RMER17A2 LTR ERVK -603 303 1 6 1252 2879 157 25 13 chr13 87441853 87442381 -32841931 + Lx LINE L1 6120 6653 -1 5 1252 300 303 116 36 chr13 87442386 87442636 -32841676 + Lx7 LINE L1 7213 7482 -214 5 1252 225 0 0 0 chr13 87442828 87442853 -32841459 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 6 1252 4192 153 62 15 chr13 87442856 87443637 -32840675 - Lx3A LINE L1 -10 6971 6155 6 1252 4204 150 52 5 chr13 87443642 87444741 -32839571 - L1Md_F LINE L1 -4445 1438 222 6 1252 2867 85 5 39 chr13 87444755 87445247 -32839065 - L1Md_F2 LINE L1 0 6582 6164 6 1252 346 230 0 51 chr13 87445383 87445461 -32838851 + Lx6 LINE L1 7043 7116 -344 6 1252 202 231 0 15 chr13 87445746 87445812 -32838500 + A-rich Low_complexity Low_complexity 3 67 0 6 1252 22 35 0 0 chr13 87445933 87445962 -32838350 + AT_rich Low_complexity Low_complexity 1 29 0 6 1252 185 213 20 41 chr13 87446971 87447020 -32837292 - L3 LINE CR1 -3304 1185 1138 6 1252 180 0 0 0 chr13 87447470 87447490 -32836822 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 6 1252 708 45 0 0 chr13 87448279 87448367 -32835945 + (GA)n Simple_repeat Simple_repeat 1 88 0 6 1252 308 291 9 37 chr13 87448370 87448477 -32835835 - L1_Mur3 LINE L1 -7356 356 253 6 1252 23 68 0 0 chr13 87448539 87448583 -32835729 + AT_rich Low_complexity Low_complexity 1 44 0 6 1252 1018 104 14 7 chr13 87449857 87450002 -32834310 + B1_Mus2 SINE Alu 1 146 -1 6 1252 853 304 103 15 chr13 87450037 87450511 -32833801 + Lx8 LINE L1 5355 5870 -10 6 1252 216 111 0 0 chr13 87450538 87450574 -32833738 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 6 1252 897 143 0 7 chr13 87450574 87450722 -32833590 - B1_Mus1 SINE Alu 0 148 2 6 1252 265 75 38 0 chr13 87451016 87451069 -32833243 + (TA)n Simple_repeat Simple_repeat 1 55 0 6 1252 882 328 81 26 chr13 87451074 87451716 -32832596 + Lx8 LINE L1 6200 6876 -597 6 1252 268 326 12 0 chr13 87451695 87451781 -32832531 + Lx8 LINE L1 7246 7332 -141 6 1252 8230 153 26 19 chr13 87451882 87453391 -32830921 + Lx2A LINE L1 5402 6924 -84 6 1252 4665 148 33 72 chr13 87453391 87454330 -32829982 + RLTR13D6 LTR ERVK 1 902 0 6 1252 8230 146 30 19 chr13 87454330 87454383 -32829929 + Lx2A LINE L1 6925 6976 -32 6 1252 390 162 0 0 chr13 87454383 87454451 -32829861 + Lx2A LINE L1 6930 6997 -11 6 1252 39 50 0 0 chr13 87454580 87454640 -32829672 + AT_rich Low_complexity Low_complexity 1 60 0 6 1252 5378 37 0 0 chr13 87454640 87455282 -32829030 - L1Md_T LINE L1 0 6582 5941 6 1252 22 56 0 0 chr13 87455410 87455446 -32828866 + AT_rich Low_complexity Low_complexity 1 36 0 6 1252 405 0 0 0 chr13 87455622 87455667 -32828645 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1252 252 219 67 89 chr13 87455667 87455802 -32828510 - Lx9 LINE L1 -22 7622 7491 6 1252 725 236 221 76 chr13 87456832 87457062 -32827250 - ORR1B1 LTR MaLR 0 394 125 6 1252 195 69 0 0 chr13 87457062 87457091 -32827221 + (TA)n Simple_repeat Simple_repeat 2 30 0 6 1252 486 0 0 0 chr13 87457091 87457144 -32827168 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1252 725 236 221 76 chr13 87457144 87457256 -32827056 - ORR1B1 LTR MaLR -270 124 2 6 1252 21 0 0 0 chr13 87458202 87458223 -32826089 + AT_rich Low_complexity Low_complexity 1 21 0 6 1252 24 32 0 0 chr13 87458289 87458320 -32825992 + AT_rich Low_complexity Low_complexity 1 31 0 6 1252 998 218 168 87 chr13 87458584 87458905 -32825407 + ORR1B1 LTR MaLR 43 389 -5 6 1252 25 83 0 0 chr13 87459237 87459297 -32825015 + AT_rich Low_complexity Low_complexity 1 60 0 6 1252 24 77 0 0 chr13 87459531 87459583 -32824729 + AT_rich Low_complexity Low_complexity 1 52 0 6 1252 31 26 0 0 chr13 87459725 87459763 -32824549 + AT_rich Low_complexity Low_complexity 1 38 0 6 1252 24 67 0 0 chr13 87460496 87460541 -32823771 + AT_rich Low_complexity Low_complexity 1 45 0 6 1252 24 0 0 0 chr13 87460563 87460587 -32823725 + AT_rich Low_complexity Low_complexity 1 24 0 6 1252 467 231 0 9 chr13 87460796 87460901 -32823411 + Lx7 LINE L1 5833 5936 -1760 6 1252 2240 200 18 18 chr13 87461142 87461595 -32822717 + Lx2B LINE L1 6212 6664 -336 6 1252 5023 184 11 11 chr13 87461619 87463077 -32821235 + Lx2 LINE L1 5035 6500 -497 6 1252 2401 170 22 63 chr13 87463077 87463566 -32820746 + RLTR22_Mur LTR ERVK 1380 1848 0 6 1252 25 0 0 0 chr13 87463960 87463985 -32820327 + AT_rich Low_complexity Low_complexity 1 25 0 6 1252 1567 226 37 14 chr13 87464036 87464391 -32819921 - Lx5 LINE L1 -1 7049 6687 6 1252 6234 143 48 8 chr13 87464521 87465615 -32818697 - Lx3A LINE L1 -9 6972 5835 6 1252 21 36 0 0 chr13 87465865 87465893 -32818419 + AT_rich Low_complexity Low_complexity 1 28 0 6 1252 2146 161 25 3 chr13 87466828 87467240 -32817072 + L1_Mur2 LINE L1 5085 5518 -676 6 1252 3861 116 39 3 chr13 87467240 87467857 -32816455 + L1_Mus4 LINE L1 5998 6636 0 6 1252 404 295 65 12 chr13 87467857 87467875 -32816437 + L1_Mur2 LINE L1 5519 5534 -660 6 1252 492 200 0 0 chr13 87467878 87467988 -32816324 + (TA)n Simple_repeat Simple_repeat 2 111 0 6 1252 388 279 12 12 chr13 87468012 87468156 -32816156 + L1VL1 LINE L1 133 276 -6142 6 1252 332 278 27 34 chr13 87468260 87468409 -32815903 + L1Md_F LINE L1 577 724 -5795 6 1252 2368 39 6 292 chr13 87468415 87468962 -32815350 - RLTR10 LTR ERVK 0 390 1 6 1252 8795 15 0 3 chr13 87468964 87469962 -32814350 - RLTR10-int LTR ERVK -3 1984 990 6 1252 430 288 28 28 chr13 87470044 87470226 -32814086 - RLTR10-int LTR ERVK -5987 1594 1413 6 1252 391 314 19 19 chr13 87470288 87470447 -32813865 - IAP-d-int LTR ERVK -2848 3694 3536 6 1252 6165 43 8 92 chr13 87470567 87471470 -32812842 - RLTR10-int LTR ERVK -1130 857 1 6 1252 2359 39 6 292 chr13 87471470 87472017 -32812295 - RLTR10 LTR ERVK 0 390 1 6 1252 2604 210 60 6 chr13 87472020 87472640 -32811672 + Lx2 LINE L1 589 1216 -5400 6 1252 286 313 0 0 chr13 87472903 87472970 -32811342 - RMER20B LTR ERVK -503 124 58 6 1252 1055 217 83 4 chr13 87473312 87473566 -32810746 + RMER6C LTR ERVK 1 274 -416 6 1252 1211 215 14 32 chr13 87473554 87473837 -32810475 + RMER6D LTR ERVK 85 362 -358 6 1252 359 213 82 30 chr13 87473889 87474015 -32810297 + RMER6D LTR ERVK 367 479 -241 6 1252 2097 113 6 0 chr13 87474015 87474333 -32809979 + Lx LINE L1 5766 6085 -569 6 1252 2359 124 39 29 chr13 87474340 87474754 -32809558 + Lx LINE L1 6236 6653 -1 6 1252 331 227 15 0 chr13 87474758 87474824 -32809488 + RMER6D LTR ERVK 650 716 -4 6 1252 26 88 0 0 chr13 87474970 87475038 -32809274 + AT_rich Low_complexity Low_complexity 1 68 0 6 1252 259 121 15 29 chr13 87475372 87475440 -32808872 + T-rich Low_complexity Low_complexity 6 72 0 6 1252 928 121 43 0 chr13 87475440 87475581 -32808731 - B1_Mus1 SINE Alu 0 148 2 6 1252 16760 198 24 18 chr13 87476367 87477903 -32806409 + Lx2 LINE L1 1979 3485 -2401 6 1252 201 39 0 0 chr13 87477903 87477929 -32806383 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 6 1252 16760 188 34 11 chr13 87477929 87481344 -32802968 + Lx2 LINE L1 3486 6997 0 6 1252 428 77 15 0 chr13 87481499 87481564 -32802748 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1252 1121 297 92 16 chr13 87481760 87482195 -32802117 - Lx9 LINE L1 -663 6981 6514 6 1252 1032 233 84 20 chr13 87482318 87482760 -32801552 - Lx9 LINE L1 -1622 6022 5514 6 1252 225 297 97 45 chr13 87482762 87482825 -32801487 + MLT1F LTR MaLR 41 105 -443 6 1252 428 0 19 0 chr13 87482825 87482877 -32801435 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1252 225 297 97 45 chr13 87482877 87482947 -32801365 + MLT1F LTR MaLR 106 181 -367 6 1252 259 96 39 0 chr13 87483386 87483438 -32800874 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 1252 24 77 0 0 chr13 87483886 87483938 -32800374 + AT_rich Low_complexity Low_complexity 1 52 0 6 1252 477 0 0 0 chr13 87485022 87485075 -32799237 + (TG)n Simple_repeat Simple_repeat 1 53 0 6 1252 880 175 65 11 chr13 87485412 87485475 -32798837 - MurERV4_19-int LTR ERVK -572 5208 5135 6 1252 252 0 0 0 chr13 87485475 87485503 -32798809 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 6 1252 880 175 65 11 chr13 87485503 87485624 -32798688 - MurERV4_19-int LTR ERVK -646 5134 5014 6 1252 3936 122 2 25 chr13 87485624 87486261 -32798051 - L1_Mur1 LINE L1 -247 5639 5018 6 1252 6009 143 31 7 chr13 87486260 87487277 -32797035 + Lx3A LINE L1 5917 6958 -23 6 1252 405 0 0 0 chr13 87487284 87487329 -32796983 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 6 1252 6033 185 12 8 chr13 87487332 87488538 -32795774 - MurERV4_19-int LTR ERVK -762 5018 3808 6 1252 2744 12 95 6 chr13 87488539 87488876 -32795436 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1252 28794 21 1 2 chr13 87488876 87492153 -32792159 - IAPEz-int LTR ERVK 0 6481 3210 6 1252 6582 89 135 75 chr13 87492152 87493385 -32790927 - IAPEz-int LTR ERVK -5168 1313 8 6 1252 2744 12 95 6 chr13 87493385 87493722 -32790590 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1252 6704 194 30 16 chr13 87493722 87494312 -32790000 - MurERV4_19-int LTR ERVK -1968 3812 3203 6 1252 3434 72 0 9 chr13 87494312 87494761 -32789551 - L1_Mus1 LINE L1 -2 6565 6121 6 1252 6704 194 30 16 chr13 87494761 87495607 -32788705 - MurERV4_19-int LTR ERVK -2578 3202 2357 6 1252 30784 28 7 2 chr13 87495608 87500000 -32784312 - L1Md_T LINE L1 -2 6580 2168 6 1252 6823 114 25 21 chr13 87500000 87501911 -32782401 - L1Md_F LINE L1 -3716 2167 275 1 1252 7170 204 11 15 chr13 87501911 87503384 -32780928 - MurERV4_19-int LTR ERVK -3418 2362 895 2 1252 5855 166 62 24 chr13 87503401 87505035 -32779277 - Lx LINE L1 0 6654 4926 3 1252 1164 75 0 0 chr13 87505035 87505182 -32779130 + B1_Mus2 SINE Alu 1 147 0 4 1252 5855 195 49 49 chr13 87505182 87505737 -32778575 - Lx LINE L1 -961 4925 4409 3 1252 985 258 17 4 chr13 87505740 87505981 -32778331 - RMER19C LTR ERVK -367 244 1 5 1252 29 0 0 0 chr13 87506050 87506079 -32778233 + AT_rich Low_complexity Low_complexity 1 29 0 6 1252 306 0 0 0 chr13 87506251 87506285 -32778027 + (TA)n Simple_repeat Simple_repeat 1 34 0 7 1252 21 57 0 0 chr13 87507122 87507157 -32777155 + AT_rich Low_complexity Low_complexity 1 35 0 8 1252 34 55 0 0 chr13 87507999 87508054 -32776258 + AT_rich Low_complexity Low_complexity 1 55 0 9 1252 235 288 51 139 chr13 87508377 87508514 -32775798 - RMER12 LTR ERVK -465 857 733 1 1252 422 324 11 16 chr13 87508514 87508699 -32775613 - Lx7 LINE L1 -1387 6309 6126 1 1252 858 215 71 9 chr13 87508891 87509102 -32775210 - URR1B DNA MER1_type -1 224 1 1 1252 366 272 15 18 chr13 87509126 87509276 -32775036 - Lx8 LINE L1 -1584 5889 5709 1 1252 2359 136 7 0 chr13 87509579 87509983 -32774329 - L1_Mm LINE L1 -3619 2264 1858 1 1252 2934 91 5 0 chr13 87509978 87510374 -32773938 + L1_Mus2 LINE L1 6049 6446 -120 1 1252 2209 132 68 56 chr13 87510379 87510846 -32773466 - IAPLTR2_Mm LTR ERVK -2 473 1 1 1252 20935 16 2 0 chr13 87510846 87513202 -32771110 - IAPEz-int LTR ERVK 0 6481 4123 1 1252 914 81 24 0 chr13 87513204 87513327 -32770985 - IAPEz-int LTR ERVK -2770 4910 4785 1 1252 1825 119 4 4 chr13 87513324 87513586 -32770726 - IAPEz-int LTR ERVK -5183 2497 2236 1 1252 442 66 0 32 chr13 87513575 87513638 -32770674 - IAPEz-int LTR ERVK -5062 1419 1359 1 1252 4791 67 4 53 chr13 87513638 87514332 -32769980 - IAPEz-int LTR ERVK -5819 662 3 1 1252 2209 132 68 56 chr13 87514332 87514799 -32769513 - IAPLTR2_Mm LTR ERVK -2 473 1 1 1252 834 112 0 0 chr13 87514799 87514924 -32769388 + L1_Mus2 LINE L1 6441 6565 -1 1 1252 9246 85 102 1 chr13 87515102 87516469 -32767843 - L1Md_F LINE L1 0 5883 4378 1 1252 4177 164 52 34 chr13 87516462 87517581 -32766731 - L1Md_F LINE L1 -4465 1418 270 1 1252 32 57 0 0 chr13 87518324 87518377 -32765935 + AT_rich Low_complexity Low_complexity 1 53 0 1 1252 591 326 36 43 chr13 87518474 87518813 -32765499 + Lx5 LINE L1 6735 7035 -15 2 1252 3346 144 25 5 chr13 87519043 87519615 -32764697 - Lx2 LINE L1 -753 6244 5662 2 1252 1957 215 32 13 chr13 87519603 87520070 -32764242 + L1_Mur2 LINE L1 5025 5500 -377 2 1252 1311 165 116 43 chr13 87520070 87520399 -32763913 - RLTR9E LTR ERVK 0 409 57 2 1252 536 218 8 0 chr13 87520410 87520543 -32763769 + (TA)n Simple_repeat Simple_repeat 2 135 0 2 1252 385 43 0 0 chr13 87520545 87520591 -32763721 - ETnERV2-int LTR ERVK -30 7376 7331 2 1252 1818 197 112 14 chr13 87520591 87521056 -32763256 - RLTR13D6 LTR ERVK -363 539 1 2 1252 1505 153 12 8 chr13 87521067 87521318 -32762994 - ETnERV3-int LTR ERVK -28 5780 5529 2 1252 348 123 0 58 chr13 87521331 87521400 -32762912 - RLTR45-int LTR ERVK -1172 6072 6008 2 1252 1474 159 19 22 chr13 87521496 87521851 -32762461 - ETnERV2-int LTR ERVK -980 6426 6127 2 1252 4306 246 96 98 chr13 87521820 87523991 -32760321 - ETnERV2-int LTR ERVK -1703 3141 930 2 1252 3148 49 15 15 chr13 87523991 87524402 -32759910 + IAPLTR2a LTR ERVK 1 411 0 2 1252 4306 140 85 51 chr13 87524402 87525131 -32759181 - ETnERV2-int LTR ERVK -5563 1843 1075 2 1252 550 219 30 71 chr13 87525125 87525322 -32758990 - ETnERV2-int LTR ERVK -4548 296 108 2 1252 195 129 0 0 chr13 87525368 87525399 -32758913 + (T)n Simple_repeat Simple_repeat 1 31 0 2 1252 1906 48 35 8 chr13 87525432 87525686 -32758626 - L1Md_F3 LINE L1 -1 6583 6323 3 1252 271 188 29 14 chr13 87525697 87525767 -32758545 - ETnERV2-int LTR ERVK -4764 80 10 2 1252 1371 165 120 36 chr13 87525776 87526084 -32758228 - RLTR9E LTR ERVK 0 409 76 2 1252 775 163 7 4 chr13 87526098 87526239 -32758073 + Lx LINE L1 5505 5645 -1009 3 1252 450 136 0 0 chr13 87526434 87526515 -32757797 + (TAA)n Simple_repeat Simple_repeat 3 83 0 3 1252 691 212 54 26 chr13 87526874 87527107 -32757205 - RMER19A LTR ERVK -556 181 1 3 1252 3778 38 0 0 chr13 87527335 87527786 -32756526 - L1Md_T LINE L1 0 6582 6132 3 1252 199 157 39 0 chr13 87529687 87529738 -32754574 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 3 1252 4298 313 59 53 chr13 87529840 87531930 -32752382 + RodERV21-int LTR ERV1 474 2577 -2414 3 1252 21 0 0 0 chr13 87532691 87532712 -32751600 + AT_rich Low_complexity Low_complexity 1 21 0 3 1252 26 50 0 0 chr13 87532823 87532863 -32751449 + AT_rich Low_complexity Low_complexity 1 40 0 3 1252 180 125 0 0 chr13 87532997 87533029 -32751283 + (CAT)n Simple_repeat Simple_repeat 3 34 0 3 1252 405 0 0 0 chr13 87533380 87533425 -32750887 + (TC)n Simple_repeat Simple_repeat 2 46 0 4 1252 438 65 0 0 chr13 87533425 87533486 -32750826 + (TG)n Simple_repeat Simple_repeat 1 62 0 4 1252 1056 270 110 7 chr13 87534184 87534493 -32749819 + Lx7 LINE L1 6900 7240 -456 4 1252 284 255 34 62 chr13 87534554 87534700 -32749612 + Lx2B LINE L1 6848 6989 -11 4 1252 419 293 19 19 chr13 87534705 87534865 -32749447 + Lx7 LINE L1 7253 7412 -284 4 1252 1019 215 47 3 chr13 87534867 87535168 -32749144 + ORR1B1 LTR MaLR 4 386 -8 4 1252 26 0 0 0 chr13 87535288 87535314 -32748998 + AT_rich Low_complexity Low_complexity 1 26 0 4 1252 23 0 0 0 chr13 87535387 87535410 -32748902 + AT_rich Low_complexity Low_complexity 1 23 0 4 1252 3206 121 28 22 chr13 87535474 87535727 -32748585 - L1_Mus3 LINE L1 -3 6635 6384 4 1252 207 0 0 0 chr13 87535727 87535750 -32748562 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1252 3206 121 28 22 chr13 87535750 87536033 -32748279 - L1_Mus3 LINE L1 -255 6383 6096 4 1252 3176 55 3 0 chr13 87536033 87536417 -32747895 - IAPEY_LTR LTR ERVK 0 385 1 4 1252 16852 44 3 4 chr13 87536422 87538505 -32745807 - IAPEy-int LTR ERVK -5 7508 5428 5 1252 641 93 0 30 chr13 87538503 87538603 -32745709 - IAPEy-int LTR ERVK -7416 97 1 5 1252 33201 52 1 13 chr13 87538622 87542984 -32741328 + L1Md_F2 LINE L1 1275 5586 -297 5 1252 7609 60 3 21 chr13 87542985 87543998 -32740314 + L1Md_F2 LINE L1 5588 6582 0 5 1252 354 336 18 9 chr13 87545058 87545169 -32739143 - PB1D10 SINE Alu 0 117 6 5 1252 252 225 0 73 chr13 87545360 87545456 -32738856 + Lx7 LINE L1 5259 5347 -533 5 1252 42 71 0 0 chr13 87545456 87545540 -32738772 + AT_rich Low_complexity Low_complexity 1 84 0 5 1252 1399 127 0 0 chr13 87545564 87545776 -32738536 - L1_Mus2 LINE L1 -6 6560 6349 5 1252 1261 25 6 12 chr13 87545885 87546005 -32738307 + (GAA)n Simple_repeat Simple_repeat 2 121 0 5 1252 1368 67 0 0 chr13 87546005 87546185 -32738127 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 5 1252 1261 25 6 12 chr13 87546185 87546226 -32738086 + (GAA)n Simple_repeat Simple_repeat 2 42 0 5 1252 261 336 0 57 chr13 87546365 87546488 -32737824 + Lx7 LINE L1 5620 5735 -1961 5 1252 216 237 0 0 chr13 87546597 87546635 -32737677 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1252 254 130 0 0 chr13 87546635 87546681 -32737631 + MER4B-int LTR ERV1 1150 1195 -5563 6 1252 666 356 35 23 chr13 87546685 87547366 -32736946 + Lx9 LINE L1 6688 7512 -132 6 1252 429 20 0 0 chr13 87547369 87547419 -32736893 + (TG)n Simple_repeat Simple_repeat 1 50 0 6 1252 243 289 0 149 chr13 87547422 87547536 -32736776 - ORR1D-int LTR MaLR -416 954 858 6 1252 292 162 0 36 chr13 87547827 87547910 -32736402 + CT-rich Low_complexity Low_complexity 3 82 0 6 1252 228 67 0 0 chr13 87548677 87548707 -32735605 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1252 1283 297 108 7 chr13 87548708 87549172 -32735140 + Lx7 LINE L1 6195 6705 -991 5 1252 7461 85 37 12 chr13 87549176 87551243 -32733069 + MMVL30-int LTR ERV1 1504 3621 -77 6 1252 463 165 14 64 chr13 87551228 87551376 -32732936 + MMVL30-int LTR ERV1 3629 3698 0 6 1252 3468 96 6 6 chr13 87551376 87551871 -32732441 + RLTR1C LTR ERV1 1 495 -8 6 1252 269 30 0 0 chr13 87551881 87551914 -32732398 - MTB LTR MaLR -374 33 1 6 1252 5461 147 25 77 chr13 87551914 87553072 -32731240 - MTB-int LTR MaLR 0 1098 1 6 1252 2608 124 15 5 chr13 87553072 87553468 -32730844 - MTB LTR MaLR 0 400 1 6 1252 200 263 50 20 chr13 87553789 87553890 -32730422 + T-rich Low_complexity Low_complexity 3 106 0 6 1252 1520 28 0 0 chr13 87554286 87554466 -32729846 + L1_Mus1 LINE L1 6386 6565 -2 6 1252 22 35 0 0 chr13 87554466 87554495 -32729817 + AT_rich Low_complexity Low_complexity 1 29 0 7 156 5651 198 10 2 chr13 87555413 87556865 -32727447 + Lx2 LINE L1 5185 6645 -352 7 1253 742 228 110 0 chr13 87556847 87557066 -32727246 + Lx2 LINE L1 6755 6997 0 7 1253 1328 287 74 44 chr13 87557359 87557859 -32726453 - RLTR17 LTR ERVK -73 619 105 7 1253 320 289 121 54 chr13 87557867 87558044 -32726268 + B3A SINE B2 14 197 -1 7 1253 22 0 0 0 chr13 87558072 87558094 -32726218 + AT_rich Low_complexity Low_complexity 1 22 0 7 1253 2767 82 42 5 chr13 87558103 87558485 -32725827 + MTA_Mm LTR MaLR 1 396 0 7 1253 3541 72 4 2 chr13 87558485 87558971 -32725341 + MTA_Mm-int LTR MaLR 1 487 -611 7 1253 1340 284 52 37 chr13 87560563 87561028 -32723284 - RMER19C LTR ERVK 0 611 140 7 1253 260 70 23 0 chr13 87561260 87561303 -32723009 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 7 1253 1004 180 49 0 chr13 87561520 87561703 -32722609 - B2_Mm2 SINE B2 -1 194 3 7 1253 1211 287 34 73 chr13 87562247 87562683 -32721629 + MTD LTR MaLR 1 419 0 7 1253 1461 205 16 9 chr13 87562691 87563045 -32721267 - RMER6C LTR ERVK 0 690 331 8 1253 669 212 68 0 chr13 87563128 87563260 -32721052 - RMER6C LTR ERVK -577 143 3 8 1253 183 42 0 0 chr13 87564152 87564176 -32720136 + (TG)n Simple_repeat Simple_repeat 1 24 0 8 1253 201 167 0 0 chr13 87564289 87564343 -32719969 + T-rich Low_complexity Low_complexity 1 54 0 8 1253 2606 142 13 32 chr13 87564807 87565274 -32719038 - Lx2B LINE L1 0 7000 6543 8 1253 707 204 75 0 chr13 87565274 87565421 -32718891 - Lx2B LINE L1 -254 6746 6589 8 1253 3752 48 0 0 chr13 87565447 87565902 -32718410 + L1Md_T LINE L1 6128 6582 0 8 1253 392 157 0 0 chr13 87565902 87565972 -32718340 + L1_Mur2 LINE L1 5302 5371 -506 8 1253 2136 216 46 13 chr13 87566126 87566603 -32717709 + RLTR16 LTR ERVK 13 505 0 8 1253 338 293 8 47 chr13 87567600 87567729 -32716583 - MTEa LTR MaLR 0 379 256 8 1253 313 272 28 55 chr13 87567921 87568030 -32716282 + RSINE1 SINE B4 14 119 -46 8 1253 809 251 41 137 chr13 87568034 87568449 -32715863 + RLTR30 LTR ERV1 5 379 0 9 1253 566 145 0 7 chr13 87568887 87569026 -32715286 + CT-rich Low_complexity Low_complexity 2 139 0 9 1253 648 292 74 45 chr13 87569029 87569406 -32714906 - Lx9 LINE L1 -155 7489 7102 9 1253 213 178 0 0 chr13 87570226 87570271 -32714041 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1253 1468 211 20 22 chr13 87570385 87570743 -32713569 + RLTR15 LTR ERVK 1 357 -2 9 1253 535 354 98 0 chr13 87570767 87570982 -32713330 - B4A SINE B4 -51 241 6 9 1253 1200 99 0 0 chr13 87571975 87572188 -32712124 + (TA)n Simple_repeat Simple_repeat 1 213 0 9 1253 21 0 0 0 chr13 87572335 87572356 -32711956 + AT_rich Low_complexity Low_complexity 1 21 0 9 1253 180 0 0 0 chr13 87573110 87573130 -32711182 + (CA)n Simple_repeat Simple_repeat 1 20 0 9 1253 717 150 20 0 chr13 87573130 87573277 -32711035 + (TA)n Simple_repeat Simple_repeat 1 150 0 9 1253 747 240 102 24 chr13 87573710 87573915 -32710397 + Lx6 LINE L1 6975 7195 -265 1 1253 363 127 0 0 chr13 87574002 87574065 -32710247 + (TGGA)n Simple_repeat Simple_repeat 4 66 0 1 1253 206 243 14 0 chr13 87574312 87574382 -32709930 + T-rich Low_complexity Low_complexity 1 71 0 1 1253 25 51 0 0 chr13 87574455 87574494 -32709818 + AT_rich Low_complexity Low_complexity 1 39 0 1 1253 468 0 0 0 chr13 87574617 87574669 -32709643 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1253 622 141 15 23 chr13 87574669 87574791 -32709521 - L1_Mus4 LINE L1 -20 6616 6493 1 1253 647 109 0 0 chr13 87574791 87574883 -32709429 + L1_Mus4 LINE L1 6383 6474 -162 1 1253 1096 111 24 73 chr13 87575281 87575486 -32708826 + B2_Mm2 SINE B2 1 195 0 1 1253 211 204 23 0 chr13 87575760 87575804 -32708508 + GA-rich Low_complexity Low_complexity 5 49 0 1 1253 6121 141 25 44 chr13 87576006 87577324 -32706988 + L1_Mus4 LINE L1 5332 6636 0 1 1253 339 291 97 81 chr13 87577421 87577626 -32706686 + MTD LTR MaLR 5 385 -34 1 1253 566 197 58 7 chr13 87577626 87577764 -32706548 - B1_Mur3 SINE Alu -3 146 2 1 1253 339 287 114 102 chr13 87577764 87577796 -32706516 + MTD LTR MaLR 386 406 -13 1 1253 22 56 0 0 chr13 87578949 87578985 -32705327 + AT_rich Low_complexity Low_complexity 1 36 0 1 1253 189 229 95 32 chr13 87579152 87579215 -32705097 - MIRc SINE MIR -116 152 86 1 1253 198 0 0 0 chr13 87580221 87580243 -32704069 + (T)n Simple_repeat Simple_repeat 1 22 0 1 1253 35483 55 9 4 chr13 87580611 87585937 -32698375 + L1Md_T LINE L1 276 5586 -297 1 1253 8230 44 0 0 chr13 87585937 87586933 -32697379 + L1Md_T LINE L1 5587 6582 0 1 1253 318 50 0 0 chr13 87587650 87587690 -32696622 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1253 423 413 20 0 chr13 87587693 87587843 -32696469 - RSINE1 SINE B4 -10 155 3 1 1253 488 331 121 76 chr13 87588256 87588612 -32695700 + MTD LTR MaLR 46 417 -2 1 1253 319 323 89 26 chr13 87589016 87589207 -32695105 - L1MEe LINE L1 -4488 366 164 1 1253 293 330 71 50 chr13 87589343 87589364 -32694948 - B2_Mm2 SINE B2 -9 186 1 1 1253 555 350 12 6 chr13 87589364 87589525 -32694787 - RSINE1 SINE B4 -2 163 2 1 1253 240 122 0 0 chr13 87589653 87589694 -32694618 + (TA)n Simple_repeat Simple_repeat 2 42 0 1 1253 417 20 0 0 chr13 87590120 87590170 -32694142 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1253 213 235 24 24 chr13 87590289 87590372 -32693940 + (TA)n Simple_repeat Simple_repeat 1 83 0 1 1253 26 0 0 0 chr13 87590533 87590559 -32693753 + AT_rich Low_complexity Low_complexity 1 26 0 1 1253 601 328 51 90 chr13 87591011 87591366 -32692946 - ORR1E LTR MaLR -17 342 2 1 1253 232 127 36 0 chr13 87591397 87591452 -32692860 + (TA)n Simple_repeat Simple_repeat 2 58 0 1 1253 2087 137 27 19 chr13 87592102 87592467 -32691845 + RLTR9A LTR ERVK 1 368 0 1 1253 369 93 0 0 chr13 87593449 87593503 -32690809 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 1 1253 183 114 0 0 chr13 87593887 87593922 -32690390 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1253 389 339 0 0 chr13 87593928 87594055 -32690257 - B1_Mur2 SINE Alu -1 148 22 1 1253 7123 138 30 8 chr13 87594124 87596180 -32688132 + L1VL4 LINE L1 14 2113 -1446 1 1253 1054 105 6 6 chr13 87596686 87596858 -32687454 + L1VL4 LINE L1 2105 2276 -1283 1 1253 2588 113 11 32 chr13 87596829 87597266 -32687046 - L1_Mus3 LINE L1 -669 5214 4787 1 1253 6589 126 23 5 chr13 87597266 87598660 -32685652 + L1_Mus3 LINE L1 5218 6633 -5 1 1253 397 63 48 0 chr13 87598662 87598725 -32685587 + L1VL4 LINE L1 2256 2321 -1238 1 1253 24 0 0 0 chr13 87598846 87598870 -32685442 + AT_rich Low_complexity Low_complexity 1 24 0 1 1253 7145 56 1 0 chr13 87599430 87600324 -32683988 - L1_Mm LINE L1 -337 5546 4652 1 1253 3396 58 13 11 chr13 87600324 87600777 -32683535 + L1Md_F2 LINE L1 6129 6582 0 1 1253 198 0 0 0 chr13 87600878 87600900 -32683412 + (A)n Simple_repeat Simple_repeat 1 22 0 1 1253 21 0 0 0 chr13 87601509 87601530 -32682782 + AT_rich Low_complexity Low_complexity 1 21 0 1 1253 216 148 0 36 chr13 87601760 87601816 -32682496 + (TATAA)n Simple_repeat Simple_repeat 3 56 0 1 1253 832 358 106 7 chr13 87602164 87602702 -32681610 - Lx9 LINE L1 -635 7009 6419 1 1253 182 91 30 0 chr13 87602756 87602789 -32681523 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 1 1253 3291 152 11 28 chr13 87602797 87602861 -32681451 - Lx LINE L1 -6 6648 6583 1 1253 261 0 0 0 chr13 87602861 87602890 -32681422 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1253 3291 152 11 28 chr13 87602890 87603399 -32680913 - Lx LINE L1 -72 6582 6085 1 1253 2749 182 39 28 chr13 87603407 87603978 -32680334 + L1_Mm LINE L1 5176 5752 -131 1 1253 180 0 0 0 chr13 87604019 87604039 -32680273 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1 1253 267 312 10 10 chr13 87604079 87604176 -32680136 - Lx8 LINE L1 -964 6509 6413 1 1253 345 333 78 0 chr13 87604201 87604405 -32679907 + Lx9 LINE L1 7191 7410 -234 1 1253 351 0 0 0 chr13 87604435 87604474 -32679838 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1253 24 0 0 0 chr13 87605066 87605090 -32679222 + AT_rich Low_complexity Low_complexity 1 24 0 1 1253 483 18 0 0 chr13 87606794 87606850 -32677462 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1253 270 0 0 0 chr13 87606850 87606879 -32677433 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1253 3366 101 2 30 chr13 87607203 87607704 -32676608 + L1_Mus2 LINE L1 6079 6565 -1 1 1253 6347 242 48 34 chr13 87608068 87608858 -32675454 + L1_Mur3 LINE L1 897 1684 -4193 1 1253 1088 128 0 6 chr13 87608858 87609038 -32675274 + (GGAGA)n Simple_repeat Simple_repeat 2 180 0 1 1253 6347 227 49 44 chr13 87609038 87609446 -32674866 + L1_Mur3 LINE L1 1685 2060 -3817 1 1253 455 0 18 0 chr13 87609446 87609501 -32674811 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1253 6347 227 49 44 chr13 87609501 87610736 -32673576 + L1_Mur3 LINE L1 2061 3352 -2525 1 1253 7294 105 14 9 chr13 87610711 87612166 -32672146 + L1_Mus3 LINE L1 5176 6632 -6 1 1253 558 232 0 25 chr13 87612181 87612340 -32671972 + L1_Mur3 LINE L1 3329 3483 -2397 1 1253 210 37 0 0 chr13 87612421 87612448 -32671864 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1253 293 81 68 0 chr13 87612448 87612522 -32671790 + (TTTG)n Simple_repeat Simple_repeat 1 79 0 1 1253 948 117 14 14 chr13 87612522 87612669 -32671643 - B1_Mm SINE Alu 0 147 1 1 1253 328 187 40 0 chr13 87612671 87612746 -32671566 + L1_Mur3 LINE L1 3516 3593 -2284 1 1253 1239 75 0 0 chr13 87612754 87612913 -32671399 + L1Md_F2 LINE L1 3370 3528 -2355 1 1253 9256 69 4 4 chr13 87612913 87614136 -32670176 + L1Md_F2 LINE L1 4364 5586 -297 1 1253 7495 67 8 6 chr13 87614137 87614474 -32669838 + L1Md_F2 LINE L1 5588 5927 -655 1 1253 4400 14 2 0 chr13 87614474 87614966 -32669346 + MT2_Mm LTR ERVL 1 493 0 1 1253 7495 67 8 6 chr13 87614966 87615609 -32668703 + L1Md_F2 LINE L1 5928 6570 -12 1 1253 2526 92 0 3 chr13 87615609 87615979 -32668333 + L1_Mm LINE L1 3539 3907 -1976 1 1253 991 203 13 36 chr13 87615974 87616283 -32668029 + L1_Mur3 LINE L1 3590 3896 -1984 1 1253 4367 14 2 2 chr13 87616285 87616778 -32667534 + MT2_Mm LTR ERVL 1 493 0 1 1253 47205 15 8 0 chr13 87616778 87622095 -32662217 + MERVL-int LTR ERVL 1 5360 -125 1 1253 392 167 46 35 chr13 87622095 87622182 -32662130 + ORR1A3-int LTR MaLR 553 640 -1323 1 1253 314 0 0 0 chr13 87622182 87622220 -32662092 + MERVL-int LTR ERVL 5448 5485 0 1 1253 4367 14 2 2 chr13 87622220 87622713 -32661599 + MT2_Mm LTR ERVL 1 493 0 1 1253 799 248 18 18 chr13 87622713 87622935 -32661377 + L1_Mur3 LINE L1 3895 4116 -1764 1 1253 1522 317 14 29 chr13 87622929 87623755 -32660557 + Lx5 LINE L1 6219 6935 -115 1 1253 696 258 112 0 chr13 87624561 87624739 -32659573 - B3A SINE B2 0 198 1 1 1253 1113 300 50 35 chr13 87624762 87625298 -32659014 - L1MC1 LINE L1 -24 6309 5766 1 1253 3955 151 30 0 chr13 87625320 87625982 -32658330 + Lx3B LINE L1 6289 6970 -3 1 1253 387 60 0 0 chr13 87625985 87626035 -32658277 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 1253 435 141 0 0 chr13 87628156 87628234 -32656078 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1253 30 59 0 0 chr13 87628632 87628683 -32655629 + AT_rich Low_complexity Low_complexity 1 51 0 1 1253 1092 57 14 0 chr13 87628755 87628896 -32655416 + B1_Mm SINE Alu 5 147 0 1 1253 300 53 0 0 chr13 87628896 87628934 -32655378 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1253 1158 296 40 18 chr13 87630423 87630819 -32653493 + MTD LTR MaLR 1 405 -14 1 1253 180 0 0 0 chr13 87631530 87631550 -32652762 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1253 303 28 0 0 chr13 87631618 87631654 -32652658 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1253 333 0 0 0 chr13 87631729 87631766 -32652546 + (TA)n Simple_repeat Simple_repeat 1 37 0 1 1253 317 24 24 0 chr13 87634091 87634133 -32650179 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1253 257 225 24 79 chr13 87634215 87634379 -32649933 + (CAGTT)n Simple_repeat Simple_repeat 3 157 0 1 1253 965 170 16 5 chr13 87634400 87634589 -32649723 + RMER6C LTR ERVK 500 690 0 1 1253 17018 182 87 11 chr13 87634634 87637992 -32646320 - Lx LINE L1 -5 6649 3305 1 1253 207 0 0 0 chr13 87637992 87638015 -32646297 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1253 17018 198 116 14 chr13 87638015 87638258 -32646054 - Lx LINE L1 -2579 3304 2658 1 1253 219 36 0 0 chr13 87638258 87638286 -32646026 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1 1253 17018 187 87 22 chr13 87638286 87640295 -32644017 - Lx LINE L1 -3226 2657 589 1 1253 432 0 0 0 chr13 87641368 87641416 -32642896 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1253 23 78 0 0 chr13 87641497 87641548 -32642764 + AT_rich Low_complexity Low_complexity 1 51 0 1 1253 32878 16 0 0 chr13 87641884 87646400 -32637912 - L1Md_A LINE L1 0 6582 2065 1 1253 1785 109 31 22 chr13 87646400 87646719 -32637593 + RLTRETN_Mm LTR ERVK 1 322 0 1 1253 15726 199 35 25 chr13 87646719 87652697 -32631615 + ETnERV2-int LTR ERVK 1 6682 -724 1 1253 7357 15 4 19 chr13 87652698 87654382 -32629930 - L1Md_A LINE L1 -3813 2070 416 1 1253 535 234 7 65 chr13 87654640 87654795 -32629517 + B1_Mus1 SINE Alu 2 147 -1 1 1253 1376 131 3 3 chr13 87655097 87655331 -32628981 - Lx LINE L1 -855 5799 5566 1 1253 5665 86 9 25 chr13 87655331 87656133 -32628179 + L1_Mus2 LINE L1 5778 6566 0 1 1253 418 296 88 16 chr13 87656650 87656832 -32627480 - MTE-int LTR MaLR -76 1504 1310 1 1253 572 256 187 70 chr13 87656832 87657046 -32627266 - Lx6 LINE L1 -112 7348 7158 1 1253 1772 226 101 86 chr13 87657032 87657900 -32626412 - Lx6 LINE L1 -1389 6071 5191 1 1253 2681 206 91 31 chr13 87657900 87658244 -32626068 + RLTR25A LTR ERVK 93 453 -650 1 1253 1674 176 14 58 chr13 87658244 87658588 -32625724 + ORR1A4 LTR MaLR 1 329 0 1 1253 2681 206 91 31 chr13 87658588 87658921 -32625391 + RLTR25A LTR ERVK 454 811 -292 1 1253 1456 176 26 26 chr13 87659454 87659813 -32624499 + ORR1A4 LTR MaLR 42 394 0 1 1253 3231 227 49 60 chr13 87659816 87661058 -32623254 - Lx6 LINE L1 -2093 3787 2559 1 1253 211 274 0 0 chr13 87661059 87661121 -32623191 + T-rich Low_complexity Low_complexity 2 63 0 1 1253 351 276 19 0 chr13 87661121 87661226 -32623086 - Lx6 LINE L1 -3315 2565 2459 1 1253 38425 45 3 4 chr13 87661222 87667343 -32616969 - L1Md_A LINE L1 0 6582 466 1 1253 1807 231 55 98 chr13 87667364 87667641 -32616671 - Lx6 LINE L1 -3410 2470 2212 1 1253 1802 97 6 74 chr13 87667641 87667952 -32616360 + L1_Mus2 LINE L1 6277 6566 0 1 1253 1807 231 55 98 chr13 87667952 87668122 -32616190 - Lx6 LINE L1 -3669 2211 2061 1 1253 342 0 0 0 chr13 87668122 87668160 -32616152 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1253 324 0 0 0 chr13 87668160 87668195 -32616117 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1253 1807 231 55 98 chr13 87668195 87668628 -32615684 - Lx6 LINE L1 -3820 2060 1627 1 1253 706 244 46 104 chr13 87668620 87668927 -32615385 - Lx6 LINE L1 -6464 1264 976 1 1253 1719 122 0 0 chr13 87668945 87669190 -32615122 - Lx3B LINE L1 -201 6772 6528 2 1253 349 242 33 0 chr13 87669187 87669278 -32615034 + Lx3B LINE L1 6875 6968 -5 2 1253 1193 52 19 0 chr13 87669257 87669412 -32614900 + L1Md_F2 LINE L1 5684 5841 -741 2 1253 3499 88 10 10 chr13 87669412 87669940 -32614372 + L1Md_F2 LINE L1 6064 6582 0 2 1253 740 355 50 41 chr13 87670041 87670578 -32613734 - Lx6 LINE L1 -7169 559 18 1 1253 507 350 162 11 chr13 87670845 87671209 -32613103 - MTD LTR MaLR 0 419 1 2 1253 380 147 13 0 chr13 87672088 87672163 -32612149 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 1253 17156 172 83 63 chr13 87672953 87679044 -32605268 - L1_Mus3 LINE L1 -1 6637 430 2 1253 254 293 58 14 chr13 87679055 87679263 -32605049 - L1M2 LINE L1 -809 5482 5266 2 1253 1077 244 164 21 chr13 87679998 87680464 -32603848 - ORR1B2-int LTR MaLR -846 524 9 2 1253 1490 235 13 45 chr13 87680469 87680848 -32603464 - ORR1B2 LTR MaLR 0 367 1 2 1253 482 271 21 52 chr13 87680853 87681044 -32603268 + Lx7 LINE L1 7244 7428 -268 2 1253 27 62 0 0 chr13 87681190 87681238 -32603074 + AT_rich Low_complexity Low_complexity 1 48 0 2 1253 22 80 0 0 chr13 87682035 87682085 -32602227 + AT_rich Low_complexity Low_complexity 1 50 0 2 1253 456 226 76 53 chr13 87682867 87682998 -32601314 - RLTR23 LTR ERV1 0 430 297 2 1253 494 103 13 0 chr13 87683091 87683169 -32601143 - L1_Mus3 LINE L1 -244 6394 6316 2 1253 1151 108 21 0 chr13 87683172 87683358 -32600954 + L1_Mus3 LINE L1 6447 6636 -2 2 1253 22 0 0 0 chr13 87683719 87683741 -32600571 + AT_rich Low_complexity Low_complexity 1 22 0 2 1253 24 32 0 0 chr13 87684335 87684366 -32599946 + AT_rich Low_complexity Low_complexity 1 31 0 2 1253 408 266 18 0 chr13 87684757 87684870 -32599442 + Lx LINE L1 5120 5234 -649 2 1253 6332 143 11 27 chr13 87684878 87686056 -32598256 + Lx LINE L1 5482 6651 -3 2 1253 441 0 0 0 chr13 87686177 87686226 -32598086 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1254 221 225 37 24 chr13 87688006 87688088 -32596224 + (TA)n Simple_repeat Simple_repeat 2 84 0 2 1254 237 139 0 0 chr13 87688127 87688170 -32596142 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1254 261 0 0 0 chr13 87688250 87688279 -32596033 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1254 252 0 0 0 chr13 87688545 87688573 -32595739 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1254 355 344 11 15 chr13 87688574 87688870 -32595442 - L1MA4 LINE L1 -369 5934 5637 2 1254 310 158 104 10 chr13 87688894 87688990 -32595322 - Lx LINE L1 0 6654 6550 2 1254 484 331 66 84 chr13 87688994 87689373 -32594939 - Lx8 LINE L1 -20 7453 7082 2 1254 470 266 21 7 chr13 87689768 87689992 -32594320 - L1MA4 LINE L1 -483 5701 5472 2 1254 2113 247 62 25 chr13 87690157 87690759 -32593553 + Lx6 LINE L1 6466 7089 -371 2 1254 229 288 8 16 chr13 87690758 87690885 -32593427 + Lx7 LINE L1 7422 7547 -149 2 1254 189 0 0 0 chr13 87691079 87691100 -32593212 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1254 215 241 0 0 chr13 87691160 87691214 -32593098 + T-rich Low_complexity Low_complexity 1 54 0 2 1254 24 53 0 0 chr13 87691339 87691377 -32592935 + AT_rich Low_complexity Low_complexity 1 38 0 2 1254 22 0 0 0 chr13 87691552 87691574 -32592738 + AT_rich Low_complexity Low_complexity 1 22 0 2 1254 180 77 0 0 chr13 87691684 87691710 -32592602 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2 1254 1210 68 0 6 chr13 87691727 87691890 -32592422 - L1_Mus1 LINE L1 -1 6566 6405 2 1254 826 280 61 69 chr13 87691891 87692215 -32592097 - ORR1D1 LTR MaLR -59 308 3 2 1254 342 0 0 0 chr13 87692261 87692299 -32592013 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1254 407 148 11 0 chr13 87692300 87692388 -32591924 + GA-rich Low_complexity Low_complexity 2 90 0 2 1254 263 314 96 24 chr13 87692402 87692611 -32591701 - Lx9 LINE L1 -172 7472 7249 2 1254 460 159 23 0 chr13 87692897 87692985 -32591327 - Lx9 LINE L1 -158 7486 7397 2 1254 631 337 80 28 chr13 87692990 87693463 -32590849 - Lx8 LINE L1 -2 7471 6974 2 1254 428 285 166 52 chr13 87693636 87693847 -32590465 - ORR1E LTR MaLR -7 352 118 2 1254 2266 74 3 16 chr13 87693862 87694178 -32590134 - L1_Mus1 LINE L1 0 6567 6256 2 1254 898 152 0 0 chr13 87694178 87694323 -32589989 + L1_Mm LINE L1 4504 4648 -1235 2 1254 273 266 80 60 chr13 87694328 87694428 -32589884 - ORR1E LTR MaLR -257 102 1 2 1254 431 286 14 21 chr13 87694598 87694741 -32589571 - RMER19C LTR ERVK 0 611 470 2 1254 3260 111 6 4 chr13 87694741 87695220 -32589092 - Lx LINE L1 -446 6208 5729 2 1254 2199 174 9 21 chr13 87695220 87695655 -32588657 + Lx LINE L1 6222 6651 -3 2 1254 667 286 6 22 chr13 87695658 87695909 -32588403 - RMER19B LTR ERVK -238 664 296 2 1254 2935 18 0 6 chr13 87695911 87696250 -32588062 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1254 34096 25 26 9 chr13 87696250 87700278 -32584034 + IAPEz-int LTR ERVK 8 4103 -2378 2 1254 8887 26 2 5 chr13 87700276 87701308 -32583004 + IAPEz-int LTR ERVK 5453 6481 0 2 1254 2947 15 0 6 chr13 87701308 87701647 -32582665 + IAPLTR1a_Mm LTR ERVK 1 337 0 2 1254 760 245 39 48 chr13 87701652 87701858 -32582454 - RMER19B LTR ERVK -391 511 308 2 1254 462 288 216 17 chr13 87701903 87702200 -32582112 + Lx8 LINE L1 6384 6739 -734 2 1254 343 252 204 0 chr13 87702210 87702357 -32581955 - L1M2 LINE L1 -842 5301 5125 2 1254 22 0 0 0 chr13 87703411 87703433 -32580879 + AT_rich Low_complexity Low_complexity 1 22 0 2 1254 802 242 171 24 chr13 87703433 87703767 -32580545 + Lx9 LINE L1 7261 7643 -1 2 1254 21 82 0 0 chr13 87703853 87703902 -32580410 + AT_rich Low_complexity Low_complexity 1 49 0 2 1254 475 316 100 42 chr13 87704348 87704820 -32579492 - L1M4 LINE L1 -2104 4042 3544 2 1254 6458 85 3 3 chr13 87705050 87705925 -32578387 + L1_Mus2 LINE L1 5691 6565 -1 2 1254 3907 165 36 5 chr13 87705920 87706921 -32577391 + Lx2 LINE L1 5289 6315 -682 2 1254 543 191 11 0 chr13 87706918 87707012 -32577300 + Lx2 LINE L1 6513 6607 -390 2 1254 6076 167 13 3 chr13 87707016 87708757 -32575555 - Lx LINE L1 -205 6449 4687 2 1254 35358 35 1 1 chr13 87709061 87715142 -32569170 + L1Md_T LINE L1 1 5589 -297 2 1254 8968 6 0 0 chr13 87715142 87716138 -32568174 + L1Md_T LINE L1 5590 6585 0 2 1254 21 0 0 0 chr13 87716170 87716191 -32568121 + AT_rich Low_complexity Low_complexity 1 21 0 2 1254 306 248 166 20 chr13 87716945 87717192 -32567120 - L1M2 LINE L1 -1188 4955 4673 2 1254 414 0 0 0 chr13 87717204 87717250 -32567062 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1254 228 122 0 0 chr13 87717254 87717295 -32567017 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 2 1254 347 305 122 32 chr13 87717302 87717580 -32566732 - L1M2 LINE L1 -1491 4652 4350 2 1254 387 0 0 0 chr13 87718685 87718728 -32565584 + (TA)n Simple_repeat Simple_repeat 2 44 0 2 1254 350 345 45 70 chr13 87719463 87719619 -32564693 - RSINE1 SINE B4 -1 164 13 2 1254 21 36 0 0 chr13 87719850 87719878 -32564434 + AT_rich Low_complexity Low_complexity 1 28 0 2 1254 291 335 117 118 chr13 87719883 87720181 -32564131 + RSINE1 SINE B4 4 292 0 2 1254 22 0 0 0 chr13 87720220 87720242 -32564070 + AT_rich Low_complexity Low_complexity 1 22 0 2 1254 567 0 0 0 chr13 87720406 87720469 -32563843 + (TTTTG)n Simple_repeat Simple_repeat 3 65 0 2 1254 1101 37 7 0 chr13 87720469 87720604 -32563708 - B1_Mm SINE Alu -11 136 1 2 1254 243 0 0 0 chr13 87720629 87720656 -32563656 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1254 818 117 0 38 chr13 87720839 87720972 -32563340 - BGLII LTR ERVK -22 399 272 2 1254 4333 45 0 2 chr13 87720979 87721508 -32562804 - L1_Mm LINE L1 -93 5790 5263 2 1254 1885 65 4 0 chr13 87721508 87721756 -32562556 + L1Md_F2 LINE L1 6334 6582 0 2 1254 1966 91 3 3 chr13 87721761 87722048 -32562264 - BGLII LTR ERVK -134 287 1 2 1254 25 0 0 0 chr13 87723025 87723050 -32561262 + AT_rich Low_complexity Low_complexity 1 25 0 2 1254 216 0 0 0 chr13 87723917 87723941 -32560371 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1254 395 375 7 7 chr13 87725360 87725513 -32558799 + RSINE1 SINE B4 9 161 -4 2 1254 1322 171 21 0 chr13 87725725 87725964 -32558348 - Lx3B LINE L1 -697 6276 6033 2 1254 3693 179 31 1 chr13 87725964 87726630 -32557682 + Lx3B LINE L1 6284 6969 -4 2 1254 265 298 0 0 chr13 87726834 87726918 -32557394 + L1VL4 LINE L1 411 494 -5808 2 1254 5770 167 18 1 chr13 87726959 87727060 -32557252 + L1_Mm LINE L1 3730 3830 -2053 2 1254 1575 122 52 8 chr13 87727060 87727308 -32557004 + L1Md_F2 LINE L1 6324 6582 0 2 1254 5770 167 18 1 chr13 87727308 87728284 -32556028 + L1_Mm LINE L1 3831 4824 -1059 2 1254 1913 130 43 6 chr13 87728285 87728611 -32555701 + L1_Mus3 LINE L1 6298 6635 -3 2 1254 21 0 0 0 chr13 87728915 87728936 -32555376 + AT_rich Low_complexity Low_complexity 1 21 0 2 1254 6560 127 48 10 chr13 87729134 87730272 -32554040 + Lx3_Mus LINE L1 5827 7008 -1 2 1254 23 33 0 0 chr13 87730856 87730886 -32553426 + AT_rich Low_complexity Low_complexity 1 30 0 2 1254 245 190 0 17 chr13 87730886 87730945 -32553367 - Lx3A LINE L1 -4 6977 6920 2 1254 2792 91 2 15 chr13 87730937 87731337 -32552975 + Lx3_Mus LINE L1 5654 6048 -961 2 1254 452 311 82 37 chr13 87732255 87732609 -32551703 - Lx9 LINE L1 -461 7183 6814 2 1254 298 248 76 110 chr13 87732614 87732732 -32551580 + MLT2B2 LTR ERVL 28 141 -374 2 1254 599 239 83 12 chr13 87733163 87733332 -32550980 + Lx4B LINE L1 6570 6750 -308 2 1254 4381 161 55 24 chr13 87733332 87734207 -32550105 - RLTR13D6 LTR ERVK 0 902 1 2 1254 1143 243 40 33 chr13 87734212 87734488 -32549824 + Lx4B LINE L1 6753 7030 -28 2 1254 198 0 0 0 chr13 87734494 87734516 -32549796 + (TAAA)n Simple_repeat Simple_repeat 4 25 0 2 1254 314 347 38 81 chr13 87734590 87734750 -32549562 - RSINE1 SINE B4 0 165 13 2 1254 21413 160 43 66 chr13 87735485 87741862 -32542450 - L1_Mus2 LINE L1 0 6566 361 2 1254 4410 196 35 12 chr13 87743686 87744865 -32539447 + Lx3B LINE L1 375 1384 -4493 2 1254 9796 148 138 21 chr13 87744861 87745538 -32538774 + Lx3B LINE L1 3538 4199 -1687 2 1254 450 0 0 0 chr13 87745538 87745588 -32538724 + (TA)n Simple_repeat Simple_repeat 1 50 0 2 1254 9796 148 138 21 chr13 87745588 87746004 -32538308 + Lx3B LINE L1 4200 4660 -1226 2 1254 621 40 0 0 chr13 87746004 87746080 -32538232 + (TC)n Simple_repeat Simple_repeat 2 77 0 2 1254 9796 152 84 14 chr13 87746080 87748152 -32536160 + Lx3B LINE L1 4661 6968 -5 2 1254 312 27 0 0 chr13 87748155 87748192 -32536120 + (TAA)n Simple_repeat Simple_repeat 3 39 0 2 1254 4654 137 43 22 chr13 87748192 87748787 -32535525 + Lx4A LINE L1 1393 1998 -3879 2 1254 212 0 36 0 chr13 87748787 87748815 -32535497 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1254 4654 137 43 22 chr13 87748815 87748875 -32535437 + Lx4A LINE L1 1999 2048 -3829 2 1254 378 61 0 0 chr13 87748875 87748924 -32535388 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1254 4654 137 43 22 chr13 87748924 87749171 -32535141 + Lx4A LINE L1 2049 2315 -3562 2 1254 4397 108 18 58 chr13 87749174 87749954 -32534358 + RMER17A LTR ERVK 3 751 0 2 1254 6652 148 50 5 chr13 87749954 87751179 -32533133 + Lx4A LINE L1 2311 3590 -2287 2 1254 4384 196 58 1 chr13 87751190 87752473 -32531839 - Lx3C LINE L1 -561 6415 5017 2 1254 721 191 0 0 chr13 87752476 87752602 -32531710 - Lx3C LINE L1 -1061 4816 4691 2 1254 2024 245 19 56 chr13 87752605 87753198 -32531114 + Lx2B LINE L1 6430 7000 0 3 1254 8244 157 235 7 chr13 87753189 87753883 -32530429 + Lx4A LINE L1 3566 4622 -1255 2 1254 207 0 0 0 chr13 87753883 87753906 -32530406 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1254 8244 170 144 10 chr13 87753906 87756224 -32528088 + Lx4A LINE L1 4623 7058 0 2 1254 33 0 0 0 chr13 87756416 87756449 -32527863 + AT_rich Low_complexity Low_complexity 1 33 0 3 1254 351 362 78 7 chr13 87757050 87757192 -32527120 - RSINE1 SINE B4 0 165 14 3 1254 3999 184 31 0 chr13 87757688 87758407 -32525905 + Lx3B LINE L1 6230 6970 -3 3 1254 21 0 0 0 chr13 87758415 87758436 -32525876 + AT_rich Low_complexity Low_complexity 1 21 0 3 1254 32 57 0 0 chr13 87758567 87758620 -32525692 + AT_rich Low_complexity Low_complexity 1 53 0 3 1254 422 266 128 17 chr13 87759182 87759362 -32524950 + L1MC1 LINE L1 6110 6309 -24 3 1254 40206 15 1 6 chr13 87760046 87765841 -32518471 - L1Md_A LINE L1 0 6582 828 3 1254 26 0 0 0 chr13 87765841 87765867 -32518445 + AT_rich Low_complexity Low_complexity 1 26 0 3 1254 1066 101 0 0 chr13 87765869 87766008 -32518304 + B1_Mus1 SINE Alu 3 141 -7 3 1254 456 19 0 0 chr13 87766009 87766062 -32518250 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 3 1254 279 0 0 0 chr13 87766641 87766672 -32517640 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 1254 591 53 0 0 chr13 87766720 87766795 -32517517 + (TTTA)n Simple_repeat Simple_repeat 3 77 0 3 1254 6868 89 4 2 chr13 87766795 87767761 -32516551 + L1Md_F2 LINE L1 4435 5402 -481 3 1254 564 90 0 13 chr13 87767765 87767844 -32516468 + L1Md_F2 LINE L1 5509 5586 -297 3 1254 7422 70 6 3 chr13 87767844 87768825 -32515487 + L1Md_F2 LINE L1 5587 6570 -12 3 1254 1007 124 0 0 chr13 87768877 87769022 -32515290 + B1_Mm SINE Alu 3 147 0 3 1254 302 258 109 31 chr13 87769037 87769165 -32515147 + L1MC LINE L1 3076 3213 -2933 3 1254 1406 117 17 0 chr13 87769303 87769533 -32514779 - Lx3_Mus LINE L1 0 7009 6776 3 1254 258 221 64 81 chr13 87769534 87769696 -32514616 + LTRIS5 LTR ERV1 314 609 -45 3 1254 1017 199 62 51 chr13 87769696 87770028 -32514284 + MMVL30-int LTR ERV1 25 347 -7105 3 1254 4748 107 41 13 chr13 87770070 87770818 -32513494 + MMVL30-int LTR ERV1 700 1468 -2230 3 1254 16701 63 21 18 chr13 87770893 87773251 -32511061 + MMVL30-int LTR ERV1 960 3698 0 3 1254 823 148 6 99 chr13 87773251 87773423 -32510889 + RLTR6_Mm LTR ERV1 1 156 -498 3 1254 515 212 220 34 chr13 87773436 87773700 -32510612 + RLTR6_Mm LTR ERV1 276 588 -66 3 1254 21 36 0 0 chr13 87773779 87773807 -32510505 + AT_rich Low_complexity Low_complexity 1 28 0 3 1254 22 56 0 0 chr13 87774024 87774060 -32510252 + AT_rich Low_complexity Low_complexity 1 36 0 3 1254 1245 284 16 63 chr13 87774208 87774473 -32509839 - ORR1D2 LTR MaLR 0 370 126 3 1254 1600 240 18 3 chr13 87774473 87774861 -32509451 - ORR1B1 LTR MaLR 0 394 1 3 1254 1245 284 16 63 chr13 87774861 87774978 -32509334 - ORR1D2 LTR MaLR -245 125 6 3 1254 1111 276 99 11 chr13 87775006 87775358 -32508954 - ORR1D2-int LTR MaLR -50 1320 938 3 1254 322 231 26 0 chr13 87775404 87775482 -32508830 - ORR1D2 LTR MaLR -290 80 1 3 1254 351 0 0 0 chr13 87775486 87775525 -32508787 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 3 1254 1171 57 0 0 chr13 87775527 87775668 -32508644 - B1_Mm SINE Alu -6 141 1 3 1254 8692 117 27 50 chr13 87775681 87777439 -32506873 - Lx3_Mus LINE L1 -30 6979 5268 3 1254 215 31 0 30 chr13 87777439 87777472 -32506840 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 3 1254 4459 120 67 0 chr13 87777472 87777582 -32506730 - Lx3_Mus LINE L1 -619 5267 5134 3 1254 1072 113 1 9 chr13 87777577 87777754 -32506558 - Lx3_Mus LINE L1 -1575 4568 4399 3 1254 39 68 0 0 chr13 87778169 87778243 -32506069 + AT_rich Low_complexity Low_complexity 1 74 0 3 1254 1448 256 48 4 chr13 87778497 87778860 -32505452 - RMER17B LTR ERVK 0 958 484 3 1254 25 65 0 0 chr13 87779164 87779210 -32505102 + AT_rich Low_complexity Low_complexity 1 46 0 3 1254 1083 97 0 7 chr13 87779283 87779429 -32504883 + B1_Mus2 SINE Alu 1 145 -2 3 1254 383 355 42 64 chr13 87780049 87780500 -32503812 + L1M2 LINE L1 2591 3031 -3112 3 1254 2093 150 69 8 chr13 87780541 87780918 -32503394 - RLTR9D LTR ERVK -3 400 1 3 1254 358 75 0 36 chr13 87780932 87780987 -32503325 - ETnERV2-int LTR ERVK -23 7383 7331 3 1254 7887 163 6 17 chr13 87781199 87782666 -32501646 - ETnERV2-int LTR ERVK -1179 6227 5017 3 1254 5313 293 43 35 chr13 87782643 87785787 -32498525 - ETnERV2-int LTR ERVK -3067 3100 4 3 1254 1694 161 86 13 chr13 87785789 87786137 -32498175 - RLTR9D LTR ERVK 0 383 1 3 1254 262 235 58 8 chr13 87786156 87786276 -32498036 + L1M2 LINE L1 3089 3214 -2929 3 1254 1528 206 70 85 chr13 87786442 87786887 -32497425 + Lx2B LINE L1 6554 6991 -9 3 1254 22 35 0 0 chr13 87787082 87787111 -32497201 + AT_rich Low_complexity Low_complexity 1 29 0 3 1254 22 56 0 0 chr13 87787666 87787702 -32496610 + AT_rich Low_complexity Low_complexity 1 36 0 3 1254 342 0 0 0 chr13 87788080 87788118 -32496194 + (TTG)n Simple_repeat Simple_repeat 2 39 0 3 1254 22 0 0 0 chr13 87789259 87789281 -32495031 + AT_rich Low_complexity Low_complexity 1 22 0 3 1254 448 325 87 25 chr13 87789483 87789679 -32494633 - ID_B1 SINE B4 -1 223 16 3 1254 1756 225 59 121 chr13 87789735 87790469 -32493843 + RMER6C LTR ERVK 3 690 0 3 1254 816 333 126 33 chr13 87790702 87791496 -32492816 - Lx8 LINE L1 -3 7470 6603 3 1254 2589 189 52 59 chr13 87791485 87791850 -32492462 + Lx4A LINE L1 6481 6839 -219 3 1254 477 0 0 0 chr13 87791850 87791903 -32492409 + (TA)n Simple_repeat Simple_repeat 2 54 0 3 1254 2589 189 52 59 chr13 87791903 87792116 -32492196 + Lx4A LINE L1 6840 7055 -3 3 1254 383 181 26 8 chr13 87792174 87792291 -32492021 + (TA)n Simple_repeat Simple_repeat 1 119 0 3 1254 22 0 0 0 chr13 87792454 87792476 -32491836 + AT_rich Low_complexity Low_complexity 1 22 0 3 1254 1353 201 41 104 chr13 87793691 87794029 -32490283 + ORR1B1 LTR MaLR 41 357 -37 3 1254 2833 82 28 3 chr13 87794029 87794419 -32489893 - MTB LTR MaLR 0 400 1 3 1254 6221 59 12 6 chr13 87794424 87795227 -32489085 - L1_Mus1 LINE L1 0 6567 5760 3 1254 369 0 0 0 chr13 87795290 87795331 -32488981 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 1254 1526 74 27 31 chr13 87795390 87795612 -32488700 + L1_Mus1 LINE L1 6347 6567 0 3 1254 3048 74 0 10 chr13 87796287 87796697 -32487615 + L1Md_T LINE L1 6177 6582 0 3 1254 25 0 0 0 chr13 87797083 87797108 -32487204 + AT_rich Low_complexity Low_complexity 1 25 0 3 1254 27 87 0 0 chr13 87797621 87797690 -32486622 + AT_rich Low_complexity Low_complexity 1 69 0 3 1254 638 286 86 45 chr13 87798609 87798983 -32485329 + L1_Rod LINE L1 4041 4429 -1418 3 1254 201 121 0 0 chr13 87799068 87799101 -32485211 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3 1254 2029 309 87 7 chr13 87800581 87801305 -32483007 - Lx6 LINE L1 -5 7455 6674 3 1254 7464 77 4 2 chr13 87801546 87802721 -32481591 - L1Md_F2 LINE L1 -9 6573 5398 3 1254 557 268 62 28 chr13 87803001 87803212 -32481100 + RLTR45 LTR ERVK 265 482 0 3 1254 1212 290 39 12 chr13 87803213 87803629 -32480683 + RLTR45-int LTR ERVK 1 427 -6817 3 1254 274 242 20 31 chr13 87803640 87803738 -32480574 + (TATAA)n Simple_repeat Simple_repeat 2 98 0 3 1254 368 348 29 29 chr13 87804741 87805022 -32479290 + RNERVK23-int LTR ERVK 2732 3012 -5205 3 1254 260 309 42 42 chr13 87805149 87805338 -32478974 + RMER16-int LTR ERVK 2614 2802 -2604 3 1254 1960 303 45 46 chr13 87805307 87806409 -32477903 + RNERVK23-int LTR ERVK 4608 5707 -2510 3 1254 342 0 0 0 chr13 87806918 87806956 -32477356 + (T)n Simple_repeat Simple_repeat 1 38 0 3 1254 1768 85 11 5 chr13 87807706 87807972 -32476340 + IAPEY_LTR LTR ERVK 1 373 -12 3 1254 6511 109 18 8 chr13 87807972 87808959 -32475353 + IAPEy-int LTR ERVK 62 1058 -6455 3 1254 14656 52 10 0 chr13 87808959 87810773 -32473539 + IAPEY3-int LTR ERVK 4788 6619 -1061 3 1254 646 302 50 66 chr13 87810903 87811400 -32472912 + RLTR6-int LTR ERV1 7149 7637 -141 3 1254 1210 286 33 25 chr13 87810955 87811573 -32472739 + IAPEY3-int LTR ERVK 7279 7804 -413 3 1254 1122 254 20 88 chr13 87811644 87812088 -32472224 + MMETn-int LTR ERVK 3953 4366 -478 3 1254 531 295 52 19 chr13 87812367 87812578 -32471734 + RLTR45 LTR ERVK 265 482 0 3 1254 276 54 0 0 chr13 87812579 87812616 -32471696 - L1_Mm LINE L1 -481 5402 5366 3 1254 2860 80 0 3 chr13 87812612 87813002 -32471310 + L1_Mm LINE L1 5006 5394 -489 3 1254 498 61 0 0 chr13 87814129 87814195 -32470117 + (GA)n Simple_repeat Simple_repeat 1 66 0 3 1254 284 299 66 33 chr13 87815437 87815558 -32468754 - ORR1D2 LTR MaLR 0 379 255 3 1254 2660 107 20 2 chr13 87815582 87815975 -32468337 - MTB LTR MaLR 0 400 1 3 1254 349 335 64 58 chr13 87815990 87816161 -32468151 - ORR1D2 LTR MaLR -197 173 2 3 1254 596 338 90 31 chr13 87816190 87816544 -32467768 + Lx8 LINE L1 6281 6655 -818 3 1254 2434 231 70 10 chr13 87816582 87817184 -32467128 - Lx2B LINE L1 0 7000 6363 3 1254 742 351 109 34 chr13 87817202 87817936 -32466376 + Lx8 LINE L1 6681 7469 -4 3 1255 249 57 0 0 chr13 87818328 87818363 -32465949 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1255 1592 236 8 8 chr13 87818574 87818946 -32465366 - L1_Mur2 LINE L1 -107 5770 5399 3 1255 512 123 49 0 chr13 87818943 87819024 -32465288 + Lx4B LINE L1 5791 5875 -1183 3 1255 1207 221 3 118 chr13 87819019 87819342 -32464970 + Lx4B LINE L1 6499 6784 -274 3 1255 32516 57 2 4 chr13 87819339 87823583 -32460729 + L1Md_F2 LINE L1 1352 5586 -297 3 1255 7998 48 6 1 chr13 87823583 87824574 -32459738 + L1Md_F2 LINE L1 5587 6582 0 3 1255 555 43 0 0 chr13 87825005 87825075 -32459237 + (CA)n Simple_repeat Simple_repeat 1 70 0 3 1255 25 51 0 0 chr13 87825120 87825159 -32459153 + AT_rich Low_complexity Low_complexity 1 39 0 3 1255 251 308 76 11 chr13 87825193 87825297 -32459015 - PB1D9 SINE Alu -2 118 9 3 1255 28347 145 22 35 chr13 87827059 87832966 -32451346 - L1_Mus2 LINE L1 -525 6041 217 3 1255 24 0 0 0 chr13 87833002 87833026 -32451286 + AT_rich Low_complexity Low_complexity 1 24 0 3 1255 390 42 0 0 chr13 87833113 87833161 -32451151 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1255 351 0 0 0 chr13 87833796 87833835 -32450477 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1255 733 350 73 27 chr13 87833919 87834289 -32450023 + MTD LTR MaLR 19 405 -14 3 1255 683 327 70 9 chr13 87835733 87836162 -32448150 - Lx7 LINE L1 -1300 6396 5942 3 1255 279 0 0 0 chr13 87836225 87836256 -32448056 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1255 572 283 102 19 chr13 87836487 87836537 -32447775 + Lx7 LINE L1 6838 6896 -800 3 1255 396 0 0 0 chr13 87836537 87836581 -32447731 + (GA)n Simple_repeat Simple_repeat 1 44 0 3 1255 572 283 102 19 chr13 87836581 87836746 -32447566 + Lx7 LINE L1 6897 7071 -625 3 1255 6415 104 21 0 chr13 87836834 87837822 -32446490 - L1_Mur1 LINE L1 -2579 3307 2299 3 1255 2033 172 3 0 chr13 87837822 87838159 -32446153 + Lx3A LINE L1 6644 6981 0 3 1255 25 0 0 0 chr13 87838159 87838184 -32446128 + AT_rich Low_complexity Low_complexity 1 25 0 3 1255 282 196 18 0 chr13 87838185 87838241 -32446071 + Lx7 LINE L1 7181 7237 -459 3 1255 204 83 0 59 chr13 87838337 87838388 -32445924 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 3 1255 204 40 0 0 chr13 87838383 87838408 -32445904 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1255 300 315 0 9 chr13 87838451 87838560 -32445752 + Lx7 LINE L1 7578 7685 -11 3 1255 251 312 35 52 chr13 87838617 87838732 -32445580 - MTEb LTR MaLR -1 378 266 3 1255 1242 99 21 5 chr13 87838864 87839056 -32445256 + B2_Mm2 SINE B2 1 195 0 3 1255 7347 97 6 14 chr13 87839167 87840198 -32444114 - RLTR13D5 LTR ERVK 0 1023 1 3 1255 10480 77 5 3 chr13 87840620 87842532 -32441780 + L1Md_F2 LINE L1 4436 6351 -231 3 1255 280 260 49 20 chr13 87842833 87842935 -32441377 + IAPEY3-int LTR ERVK 1462 1566 -6015 4 1255 361 158 0 0 chr13 87842952 87843009 -32441303 + IAP-d-int LTR ERVK 447 503 -6039 4 1255 1309 142 107 0 chr13 87843009 87843234 -32441078 + IAP-d-int LTR ERVK 5007 5255 -1287 4 1255 1519 119 73 35 chr13 87843234 87843559 -32440753 + IAPEY3-int LTR ERVK 6965 7338 -342 4 1255 1341 189 71 18 chr13 87843576 87843915 -32440397 + IAPEz-int LTR ERVK 6125 6481 0 4 1255 1025 213 98 44 chr13 87843915 87844230 -32440082 + IAPEY3_LTR LTR ERVK 1 332 0 4 1255 1387 120 9 0 chr13 87844240 87844457 -32439855 + L1Md_F2 LINE L1 6349 6567 -15 4 1255 1108 88 7 0 chr13 87844618 87844765 -32439547 + B1_Mus1 SINE Alu 1 148 0 4 1255 588 210 0 0 chr13 87844810 87844967 -32439345 + (TA)n Simple_repeat Simple_repeat 2 158 0 4 1255 31 44 0 0 chr13 87845000 87845045 -32439267 + AT_rich Low_complexity Low_complexity 1 45 0 4 1255 1263 286 114 0 chr13 87845278 87845726 -32438586 - RMER1B Other Other -5 1061 563 4 1255 317 209 36 167 chr13 87845756 87845826 -32438486 - Lx9 LINE L1 -235 7409 7357 4 1255 4420 133 15 6 chr13 87845826 87846551 -32437761 + L1_Mus4 LINE L1 5905 6636 0 4 1255 317 209 36 167 chr13 87846551 87846618 -32437694 - Lx9 LINE L1 -288 7356 7290 4 1255 2116 213 105 2 chr13 87846679 87847145 -32437167 - Lx4A LINE L1 -572 6486 5973 4 1255 1438 221 10 0 chr13 87847153 87847442 -32436870 + Lx4A LINE L1 6756 7047 -11 4 1255 186 43 0 0 chr13 87847453 87847476 -32436836 + (CAT)n Simple_repeat Simple_repeat 2 24 0 4 1255 8040 149 27 3 chr13 87847596 87848981 -32435331 + Lx3B LINE L1 5551 6968 -5 4 1255 309 51 0 0 chr13 87848986 87849025 -32435287 + (TAA)n Simple_repeat Simple_repeat 2 40 0 4 1255 458 33 0 16 chr13 87849484 87849545 -32434767 + (TTA)n Simple_repeat Simple_repeat 2 61 0 4 1255 890 121 20 60 chr13 87849545 87849587 -32434725 - B1_Mus2 SINE Alu -3 144 77 4 1255 333 216 8 133 chr13 87849587 87849619 -32434693 - MT2B LTR ERVL -344 257 234 4 1255 3047 39 0 0 chr13 87849619 87849976 -32434336 - IAPEY2_LTR LTR ERVK 0 357 1 4 1255 890 121 20 60 chr13 87849976 87850050 -32434262 - B1_Mus2 SINE Alu -71 76 2 4 1255 333 216 8 133 chr13 87850050 87850071 -32434241 - MT2B LTR ERVL -368 233 146 4 1255 3882 122 3 3 chr13 87851111 87851701 -32432611 - L1_Mus4 LINE L1 -5 6631 6042 4 1255 603 51 0 0 chr13 87851789 87851868 -32432444 + (CA)n Simple_repeat Simple_repeat 2 80 0 4 1255 1587 174 72 55 chr13 87851978 87852180 -32432132 + RMER17C LTR ERVK 1 188 -222 4 1255 763 64 18 0 chr13 87852180 87852290 -32432022 + (TC)n Simple_repeat Simple_repeat 2 113 0 4 1255 1587 174 72 55 chr13 87852290 87852488 -32431824 + RMER17C LTR ERVK 189 407 -3 4 1255 748 347 84 13 chr13 87852511 87852964 -32431348 - Lx8 LINE L1 -261 7212 6728 4 1255 504 200 0 0 chr13 87853184 87853309 -32431003 + (TG)n Simple_repeat Simple_repeat 2 126 0 4 1255 24 32 0 0 chr13 87855080 87855111 -32429201 + AT_rich Low_complexity Low_complexity 1 31 0 4 1255 4485 102 9 36 chr13 87855809 87856426 -32427886 - L1_Mur1 LINE L1 -296 5590 4984 4 1255 213 65 0 0 chr13 87856426 87856457 -32427855 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1255 4485 102 9 36 chr13 87856457 87856534 -32427778 - L1_Mur1 LINE L1 -903 4983 4915 4 1255 416 102 0 0 chr13 87856532 87856591 -32427721 + L1_Mur1 LINE L1 5590 5648 -238 4 1255 1431 161 41 27 chr13 87856591 87856885 -32427427 + Lx3_Mus LINE L1 6707 7004 -5 4 1255 195 42 0 0 chr13 87856885 87856909 -32427403 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 4 1255 201 196 0 0 chr13 87856929 87856985 -32427327 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1255 188 67 0 32 chr13 87857964 87857995 -32426317 + (TA)n Simple_repeat Simple_repeat 2 31 0 4 1255 6171 135 16 11 chr13 87858874 87859874 -32424438 - Lx LINE L1 0 6654 5667 4 1255 21 57 0 0 chr13 87859874 87859909 -32424403 + AT_rich Low_complexity Low_complexity 1 35 0 4 1255 447 282 0 0 chr13 87859998 87860175 -32424137 + (TATATG)n Simple_repeat Simple_repeat 4 180 0 4 1255 471 256 44 22 chr13 87860230 87860366 -32423946 + MT2A LTR ERVL 1 139 -394 4 1255 387 0 0 0 chr13 87860783 87860826 -32423486 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1255 312 335 83 79 chr13 87860960 87861455 -32422857 - RLTR17 LTR ERVK -70 622 126 4 1255 1111 169 14 0 chr13 87861460 87861667 -32422645 + Lx2 LINE L1 6777 6986 -11 4 1255 29 0 0 0 chr13 87862080 87862109 -32422203 + AT_rich Low_complexity Low_complexity 1 29 0 4 1255 236 203 0 80 chr13 87862827 87862902 -32421410 + Lx4B LINE L1 5802 5870 -1188 4 1255 2269 282 78 20 chr13 87862949 87863885 -32420427 + Lx9 LINE L1 6653 7642 -2 4 1255 257 0 30 0 chr13 87864302 87864335 -32419977 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 1255 460 321 22 31 chr13 87864343 87864568 -32419744 - Lx8 LINE L1 -453 7020 6798 4 1255 186 71 0 0 chr13 87864569 87864597 -32419715 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1255 21 82 0 0 chr13 87864733 87864782 -32419530 + AT_rich Low_complexity Low_complexity 1 49 0 4 1255 6055 156 26 34 chr13 87864823 87866589 -32417723 + L1VL4 LINE L1 108 1928 -1687 4 1255 1595 22 6 0 chr13 87866993 87867176 -32417136 + B2_Mm1t SINE B2 2 185 -8 4 1255 195 42 0 0 chr13 87868074 87868098 -32416214 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4 1255 269 288 150 16 chr13 87868351 87868478 -32415834 + MIRc SINE MIR 107 250 -18 4 1255 22 35 0 0 chr13 87868994 87869023 -32415289 + AT_rich Low_complexity Low_complexity 1 29 0 4 1255 21 0 0 0 chr13 87869628 87869649 -32414663 + AT_rich Low_complexity Low_complexity 1 21 0 4 1255 401 372 0 0 chr13 87869925 87870054 -32414258 + B1_Mur2 SINE Alu 1 129 -20 4 1255 386 354 58 27 chr13 87870705 87870966 -32413346 - L1MD2 LINE L1 -5526 1021 753 4 1255 274 300 0 0 chr13 87872014 87872094 -32412218 + (TATG)n Simple_repeat Simple_repeat 2 81 0 4 1255 10025 217 68 88 chr13 87872107 87872968 -32411344 - L1_Mur1 LINE L1 -863 5023 4136 4 1255 288 70 0 0 chr13 87872968 87873011 -32411301 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1255 10025 217 68 88 chr13 87873011 87874144 -32410168 - L1_Mur1 LINE L1 -1751 4135 2992 4 1255 834 55 0 0 chr13 87874144 87874253 -32410059 - B1_Mus1 SINE Alu -1 147 39 4 1255 291 149 73 98 chr13 87874186 87874268 -32410044 - RLTR25B LTR ERVK -519 509 430 4 1255 10025 217 68 88 chr13 87874268 87875758 -32408554 - L1_Mur1 LINE L1 -1751 2991 1486 4 1255 256 297 9 83 chr13 87875761 87875822 -32408490 - Lx7 LINE L1 -84 7612 7552 4 1255 1066 72 7 0 chr13 87875822 87875960 -32408352 + B1_Mus1 SINE Alu 3 141 -7 4 1255 256 297 9 83 chr13 87875960 87876126 -32408186 - Lx7 LINE L1 -145 7551 7402 4 1255 273 312 89 74 chr13 87876748 87876883 -32407429 - ID_B1 SINE B4 -87 137 1 4 1255 201 167 18 36 chr13 87876898 87876954 -32407358 + T-rich Low_complexity Low_complexity 2 56 0 4 1255 23 68 0 0 chr13 87877086 87877130 -32407182 + AT_rich Low_complexity Low_complexity 1 44 0 4 1255 764 99 238 0 chr13 87877278 87877396 -32406916 + RMER17B LTR ERVK 277 399 -559 4 1255 578 51 0 13 chr13 87877396 87877475 -32406837 + (TC)n Simple_repeat Simple_repeat 2 79 0 4 1255 764 99 238 0 chr13 87877475 87877507 -32406805 + RMER17B LTR ERVK 400 462 -496 4 1255 28 29 0 0 chr13 87879442 87879477 -32404835 + AT_rich Low_complexity Low_complexity 1 35 0 4 1255 982 128 0 22 chr13 87880613 87880796 -32403516 + GA-rich Low_complexity Low_complexity 2 180 0 4 1255 12641 134 30 10 chr13 87880821 87883571 -32400741 + L1Md_F LINE L1 432 3239 -2644 4 1255 1365 142 8 41 chr13 87883571 87883814 -32400498 - L1_Mur1 LINE L1 -348 5538 5304 4 1255 272 48 24 0 chr13 87883850 87883892 -32400420 + (CAAAC)n Simple_repeat Simple_repeat 2 44 0 4 1255 538 379 35 9 chr13 87884123 87884440 -32399872 + Lx8 LINE L1 6939 7263 -210 4 1255 4986 135 32 69 chr13 87884445 87885270 -32399042 + RLTR13D6 LTR ERVK 1 794 -108 4 1255 2227 146 30 8 chr13 87885270 87885663 -32398649 + RLTR9D LTR ERVK 1 402 -1 4 1255 4986 135 32 69 chr13 87885663 87885774 -32398538 + RLTR13D6 LTR ERVK 795 902 0 4 1255 24 0 0 0 chr13 87886141 87886165 -32398147 + AT_rich Low_complexity Low_complexity 1 24 0 4 1255 3663 134 24 32 chr13 87887663 87888179 -32396133 + Lx3B LINE L1 4845 5344 -542 4 1255 3157 117 6 16 chr13 87888179 87888684 -32395628 + L1_Mus3 LINE L1 6138 6637 -1 4 1255 5968 132 18 49 chr13 87888684 87888821 -32395491 + Lx3B LINE L1 5345 5493 -393 4 1255 4424 36 0 0 chr13 87888821 87889352 -32394960 + L1Md_T LINE L1 6052 6582 0 4 1255 6356 138 29 38 chr13 87889352 87890606 -32393706 + Lx3B LINE L1 5494 6740 -233 4 1255 26 0 0 0 chr13 87890703 87890729 -32393583 + AT_rich Low_complexity Low_complexity 1 26 0 4 1255 834 115 13 8 chr13 87890766 87890897 -32393415 - B2_Mm1t SINE B2 -6 187 63 4 1255 299 316 13 0 chr13 87891464 87891543 -32392769 + ID_B1 SINE B4 101 180 -44 4 1255 563 360 88 10 chr13 87892479 87892983 -32391329 + Lx8 LINE L1 6343 6892 -581 4 1255 869 282 57 43 chr13 87893054 87893500 -32390812 + MT2A LTR ERVL 3 463 -70 4 1255 510 17 0 0 chr13 87893500 87893559 -32390753 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 1255 609 304 98 69 chr13 87893559 87893589 -32390723 + MT2A LTR ERVL 464 493 -40 4 1255 208 250 31 15 chr13 87893589 87893654 -32390658 + (TATG)n Simple_repeat Simple_repeat 4 69 0 4 1255 276 30 0 0 chr13 87893730 87893763 -32390549 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1255 205 135 19 19 chr13 87894524 87894577 -32389735 + (TTATA)n Simple_repeat Simple_repeat 3 55 0 4 1255 282 233 131 46 chr13 87894586 87894911 -32389401 - Lx7 LINE L1 -36 7660 7276 4 1255 2211 224 78 38 chr13 87894992 87895069 -32389243 - RLTR20B3 LTR ERVK 0 577 509 4 1255 1663 31 0 0 chr13 87895069 87895262 -32389050 - B2_Mm1t SINE B2 0 193 1 4 1255 2211 224 78 38 chr13 87895262 87895737 -32388575 - RLTR20B3 LTR ERVK -69 508 3 4 1255 1090 249 112 29 chr13 87896274 87896650 -32387662 - Lx7 LINE L1 -403 7293 6887 4 1255 348 64 0 0 chr13 87896975 87897022 -32387290 + (A)n Simple_repeat Simple_repeat 1 47 0 4 1255 22 80 0 0 chr13 87897081 87897131 -32387181 + AT_rich Low_complexity Low_complexity 1 50 0 4 1255 21 36 0 0 chr13 87897715 87897743 -32386569 + AT_rich Low_complexity Low_complexity 1 28 0 4 1255 378 323 25 37 chr13 87898150 87898311 -32386001 + MTE-int LTR MaLR 696 854 -726 4 1255 463 195 0 0 chr13 87898311 87898398 -32385914 + Lx3C LINE L1 5423 5509 -377 4 1255 2733 141 150 11 chr13 87898398 87898965 -32385347 + Lx3C LINE L1 5618 6263 -713 4 1255 262 297 83 17 chr13 87899590 87899710 -32384602 - RLTR20D LTR ERVK -382 186 59 4 1255 21 0 0 0 chr13 87900194 87900215 -32384097 + AT_rich Low_complexity Low_complexity 1 21 0 4 1255 244 276 71 58 chr13 87900402 87900710 -32383602 - Lx7 LINE L1 0 7696 7385 4 1255 21 0 0 0 chr13 87900784 87900805 -32383507 + AT_rich Low_complexity Low_complexity 1 21 0 4 1255 417 39 0 0 chr13 87902947 87902998 -32381314 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1255 2124 254 46 9 chr13 87902999 87903567 -32380745 + L1_Mur3 LINE L1 5139 5727 -153 5 1255 2851 277 73 29 chr13 87903567 87904623 -32379689 + Lx7 LINE L1 6590 7691 -5 5 1255 252 200 0 0 chr13 87904623 87904693 -32379619 + (TA)n Simple_repeat Simple_repeat 2 71 0 5 1255 1393 167 32 28 chr13 87905632 87905916 -32378396 - Lx LINE L1 -1 6653 6369 5 1255 24 0 0 0 chr13 87906953 87906977 -32377335 + AT_rich Low_complexity Low_complexity 1 24 0 5 1255 24 32 0 0 chr13 87907042 87907073 -32377239 + AT_rich Low_complexity Low_complexity 1 31 0 5 1255 2035 252 73 2 chr13 87907584 87908116 -32376196 - RMER15 LTR ERVL -2 573 4 5 1255 10255 136 72 4 chr13 87909115 87909735 -32374577 - Lx LINE L1 -280 6374 5705 5 1255 189 0 0 0 chr13 87909735 87909756 -32374556 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1255 10255 174 95 10 chr13 87909756 87910775 -32373537 - Lx LINE L1 -179 5704 4637 5 1255 208 0 62 0 chr13 87910775 87910807 -32373505 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1255 10255 174 95 10 chr13 87910807 87911734 -32372578 - Lx LINE L1 -1247 4636 3609 5 1255 2714 144 95 14 chr13 87911750 87912345 -32371967 + RMER17A2 LTR ERVK 1 711 -247 5 1255 277 57 0 0 chr13 87912345 87912380 -32371932 - MusHAL1 LINE L1 -713 1999 1965 5 1255 1393 160 11 33 chr13 87912385 87912657 -32371655 + Lx LINE L1 6388 6653 -1 5 1255 361 343 0 74 chr13 87912889 87912933 -32371379 - Lx5 LINE L1 -396 6654 6612 5 1255 2926 67 18 3 chr13 87912933 87913323 -32370989 - MTA_Mm LTR MaLR 0 396 1 5 1255 361 343 0 74 chr13 87913323 87913346 -32370966 - Lx5 LINE L1 -439 6611 6594 5 1255 600 14 0 0 chr13 87913346 87913415 -32370897 + (TTCTCC)n Simple_repeat Simple_repeat 1 69 0 5 1255 1178 100 0 6 chr13 87913418 87913599 -32370713 + (TCC)n Simple_repeat Simple_repeat 1 180 0 5 1255 361 343 0 74 chr13 87913599 87913715 -32370597 - Lx5 LINE L1 -457 6593 6480 5 1255 12642 196 48 23 chr13 87913967 87917090 -32367222 - Lx2 LINE L1 -8 6989 3741 5 1255 2380 11 0 0 chr13 87917090 87917363 -32366949 - L1Md_T LINE L1 0 6582 6310 5 1255 12642 200 34 37 chr13 87917363 87917746 -32366566 - Lx2 LINE L1 -2137 3740 3410 5 1255 183 42 0 0 chr13 87917746 87917770 -32366542 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1255 12642 200 34 37 chr13 87917770 87918358 -32365954 - Lx2 LINE L1 -2468 3409 2823 5 1255 1532 254 42 31 chr13 87918358 87918834 -32365478 - RMER13B LTR ERVK 0 908 358 5 1255 268 59 0 0 chr13 87918836 87918870 -32365442 + L1_Mus4 LINE L1 6426 6459 -177 5 1255 709 250 7 13 chr13 87918870 87919024 -32365288 - RMER13B LTR ERVK -755 153 1 5 1255 7799 167 34 22 chr13 87919024 87921090 -32363222 - L1VL2 LINE L1 -1082 2533 445 5 1255 21 0 0 0 chr13 87921837 87921858 -32362454 + AT_rich Low_complexity Low_complexity 1 21 0 5 1255 251 206 0 27 chr13 87922125 87922200 -32362112 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 5 1255 289 298 0 12 chr13 87924452 87924537 -32359775 + MTC LTR MaLR 10 93 -328 5 1255 1823 249 32 60 chr13 87924598 87925040 -32359272 + Lx9 LINE L1 3802 4219 -1628 5 1255 180 111 0 0 chr13 87925040 87925067 -32359245 + (CAGAA)n Simple_repeat Simple_repeat 4 30 0 5 1255 1823 249 32 60 chr13 87925067 87925242 -32359070 + Lx9 LINE L1 4220 4402 -1445 5 1255 1662 222 37 14 chr13 87925251 87925599 -32358713 - RMER19C LTR ERVK 0 611 256 5 1255 3969 174 113 18 chr13 87925597 87926040 -32358272 - RMER17A2 LTR ERVK -12 894 447 5 1255 576 0 0 0 chr13 87926040 87926104 -32358208 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 1255 3969 169 116 12 chr13 87926104 87926503 -32357809 - RMER17A2 LTR ERVK -460 446 2 5 1255 524 181 71 102 chr13 87926503 87926666 -32357646 - RMER19C LTR ERVK -348 263 33 5 1255 2426 166 22 20 chr13 87926666 87927115 -32357197 + Lx LINE L1 6201 6650 -4 5 1255 392 140 31 164 chr13 87927115 87927146 -32357166 - RMER19C LTR ERVK -579 32 1 5 1255 1369 250 69 66 chr13 87927146 87927831 -32356481 + Lx9 LINE L1 4404 5090 -757 5 1255 253 62 20 20 chr13 87927851 87927900 -32356412 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1255 1552 245 77 64 chr13 87928141 87928941 -32355371 + Lx9 LINE L1 5211 6046 -1598 5 1255 3013 280 53 11 chr13 87929128 87930153 -32354159 + Lx9 LINE L1 6387 7454 -190 5 1255 929 115 65 0 chr13 87930153 87930292 -32354020 + B1_Mus1 SINE Alu 1 148 0 5 1255 681 24 0 0 chr13 87930344 87930427 -32353885 + (TG)n Simple_repeat Simple_repeat 2 84 0 5 1255 1371 310 97 30 chr13 87930440 87931227 -32353085 - RMER1B Other Other -110 956 42 5 1255 1431 297 41 83 chr13 87931333 87932149 -32352163 + MTD-int LTR MaLR 247 1098 -160 5 1255 553 238 56 36 chr13 87933158 87933354 -32350958 + MTD-int LTR MaLR 1059 1258 0 5 1255 631 266 67 43 chr13 87933355 87933668 -32350644 + MTD LTR MaLR 2 356 -63 5 1255 3618 77 2 8 chr13 87933706 87934206 -32350106 - L1Md_F2 LINE L1 -12 6570 6074 5 1255 719 252 0 0 chr13 87934310 87934449 -32349863 - B1_Mur3 SINE Alu 0 149 11 5 1255 214 282 40 17 chr13 87934626 87934799 -32349513 + (TA)n Simple_repeat Simple_repeat 1 177 0 5 1255 469 226 98 0 chr13 87935282 87935384 -32348928 + L1_Mus4 LINE L1 6353 6464 -172 5 1255 665 113 35 0 chr13 87935381 87935496 -32348816 + Lx LINE L1 6530 6648 -6 5 1255 500 255 108 15 chr13 87935690 87935885 -32348427 - L1_Rod LINE L1 -321 5526 5314 5 1255 559 329 60 47 chr13 87935881 87936264 -32348048 + Lx9 LINE L1 6794 7181 -463 5 1255 1032 70 0 7 chr13 87936899 87937042 -32347270 + B1_Mm SINE Alu 6 147 0 5 1255 768 52 0 0 chr13 87937804 87937901 -32346411 + (TA)n Simple_repeat Simple_repeat 2 98 0 5 1255 207 69 0 0 chr13 87938118 87938147 -32346165 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1255 240 86 0 0 chr13 87938147 87938182 -32346130 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1255 261 0 0 0 chr13 87938189 87938218 -32346094 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1255 447 19 0 0 chr13 87938218 87938269 -32346043 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 1255 185 224 0 17 chr13 87938689 87938748 -32345564 + (CATATA)n Simple_repeat Simple_repeat 5 62 0 5 1255 1132 315 39 61 chr13 87938792 87939303 -32345009 - RLTR20B3 LTR ERVK -56 521 22 5 1255 277 352 34 11 chr13 87939351 87939529 -32344783 - L1PB4 LINE L1 -220 5936 5755 5 1255 380 348 71 61 chr13 87939519 87939630 -32344682 - L1_Rod LINE L1 -121 5759 5659 5 1255 768 176 19 7 chr13 87939630 87939784 -32344528 + Lx3B LINE L1 6813 6968 -5 5 1255 610 313 89 62 chr13 87939784 87940299 -32344013 - L1_Rod LINE L1 -222 5658 5096 5 1255 441 0 0 0 chr13 87940299 87940348 -32343964 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1255 610 310 91 62 chr13 87940348 87940654 -32343658 - L1_Rod LINE L1 -752 5095 4792 5 1255 322 337 48 11 chr13 87940676 87940949 -32343363 - L1M2 LINE L1 -1482 4661 4379 5 1255 710 290 21 31 chr13 87941017 87941365 -32342947 - L1_Mur3 LINE L1 -2036 4110 3739 5 1255 448 277 18 0 chr13 87941378 87941490 -32342822 - B1_Mur4 SINE Alu -15 135 22 5 1255 334 303 9 0 chr13 87941714 87941823 -32342489 + Lx9 LINE L1 5098 5207 -640 5 1255 2935 84 0 0 chr13 87941822 87942226 -32342086 - L1_Mm LINE L1 -1711 4172 3769 5 1255 7476 59 21 4 chr13 87942229 87943197 -32341115 + L1Md_F2 LINE L1 5587 6570 -12 5 1255 1187 298 36 64 chr13 87943197 87943954 -32340358 + Lx9 LINE L1 5239 5973 -1671 5 1255 21 36 0 0 chr13 87944253 87944281 -32340031 + AT_rich Low_complexity Low_complexity 1 28 0 5 1255 334 208 59 12 chr13 87944317 87944534 -32339778 + (TA)n Simple_repeat Simple_repeat 1 227 0 5 1255 208 221 17 52 chr13 87944435 87944607 -32339705 + (TATAA)n Simple_repeat Simple_repeat 1 166 0 5 1255 456 184 0 10 chr13 87944625 87944724 -32339588 - L1_Mus4 LINE L1 -5 6633 6536 5 1255 1766 146 0 0 chr13 87944724 87944991 -32339321 - L1_Mus4 LINE L1 -220 6416 6150 5 1255 33 43 0 0 chr13 87944991 87945038 -32339274 + AT_rich Low_complexity Low_complexity 1 47 0 5 1255 234 266 40 23 chr13 87945044 87945221 -32339091 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 5 1255 326 187 34 57 chr13 87945202 87945378 -32338934 + (TATAA)n Simple_repeat Simple_repeat 1 172 0 5 1255 24 67 0 0 chr13 87945386 87945431 -32338881 + AT_rich Low_complexity Low_complexity 1 45 0 5 1255 285 184 35 63 chr13 87945652 87945826 -32338486 + (TATAA)n Simple_repeat Simple_repeat 5 173 0 5 1255 27 0 0 0 chr13 87945829 87945856 -32338456 + AT_rich Low_complexity Low_complexity 1 27 0 5 1255 344 325 55 40 chr13 87945857 87946056 -32338256 + Lx9 LINE L1 6339 6540 -1104 5 1255 2081 113 0 0 chr13 87946069 87946361 -32337951 - L1_Mus4 LINE L1 -343 6293 6002 5 1255 562 317 37 68 chr13 87946348 87946700 -32337612 + Lx9 LINE L1 6991 7331 -313 5 1255 190 143 41 0 chr13 87946856 87946905 -32337407 + (TA)n Simple_repeat Simple_repeat 1 51 0 5 1255 2703 130 5 14 chr13 87946960 87947396 -32336916 - Lx3_Mus LINE L1 0 7009 6578 5 1255 2130 130 53 0 chr13 87947396 87947734 -32336578 + Lx3_Mus LINE L1 6209 6564 -445 5 1255 714 109 0 0 chr13 87948087 87948197 -32336115 + (CA)n Simple_repeat Simple_repeat 1 110 0 5 1255 522 0 0 0 chr13 87948538 87948596 -32335716 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 5 1255 29 70 0 0 chr13 87948976 87949033 -32335279 + AT_rich Low_complexity Low_complexity 1 57 0 5 1255 32 0 0 0 chr13 87949097 87949129 -32335183 + AT_rich Low_complexity Low_complexity 1 32 0 5 1256 626 228 126 10 chr13 87949664 87949863 -32334449 + Lx7 LINE L1 6738 6959 -737 5 1256 490 324 74 8 chr13 87949876 87950119 -32334193 + Lx7 LINE L1 7050 7308 -388 5 1256 21 36 0 0 chr13 87951584 87951612 -32332700 + AT_rich Low_complexity Low_complexity 1 28 0 5 1256 24 0 0 0 chr13 87951630 87951654 -32332658 + AT_rich Low_complexity Low_complexity 1 24 0 5 1256 269 299 119 18 chr13 87951713 87951822 -32332490 - B3A SINE B2 -76 122 3 5 1256 938 57 0 0 chr13 87951846 87951968 -32332344 - B1_Mus2 SINE Alu 0 147 26 5 1256 432 0 0 0 chr13 87952050 87952098 -32332214 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 5 1256 2704 282 37 32 chr13 87952099 87952913 -32331399 - Lx5 LINE L1 -2 7048 6231 5 1256 699 260 16 0 chr13 87953621 87953813 -32330499 - L1_Mur3 LINE L1 -1056 4824 4630 5 1256 305 340 19 58 chr13 87953984 87954190 -32330122 + Lx8 LINE L1 6127 6324 -1149 5 1256 331 271 12 12 chr13 87954383 87954469 -32329843 + Lx8 LINE L1 6710 6795 -678 5 1256 655 308 106 22 chr13 87955103 87955531 -32328781 + Lx9 LINE L1 5429 5927 -1717 5 1256 687 252 37 23 chr13 87955722 87955937 -32328375 - RLTR45 LTR ERVK 0 482 265 5 1256 1478 251 26 68 chr13 87956210 87956663 -32327649 - RNERVK23-int LTR ERVK -326 7080 6647 5 1256 1123 311 41 25 chr13 87956738 87957572 -32326740 - RNERVK23-int LTR ERVK -456 7761 6331 5 1256 307 231 0 0 chr13 87958314 87958379 -32325933 - RNERVK23-int LTR ERVK -1883 6334 6270 5 1256 1950 311 40 39 chr13 87958881 87959980 -32324332 - RNERVK23-int LTR ERVK -2510 5707 4608 5 1256 272 301 17 17 chr13 87960023 87960138 -32324174 - SRV_MM-int LTR ERVK -2678 2728 2614 5 1256 709 338 12 12 chr13 87960191 87960546 -32323766 - SRV_MM-int LTR ERVK -5194 3023 2376 5 1256 317 229 10 20 chr13 87961569 87961667 -32322645 + (TTATA)n Simple_repeat Simple_repeat 2 98 0 5 1256 1133 273 48 26 chr13 87961678 87962096 -32322216 - RLTR45-int LTR ERVK -6817 427 1 5 1256 611 278 42 23 chr13 87962097 87962311 -32322001 - RLTR45 LTR ERVK 0 482 265 5 1256 469 330 117 14 chr13 87962604 87962887 -32321425 + Lx9 LINE L1 7145 7456 -188 5 1256 258 81 0 0 chr13 87962888 87962925 -32321387 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1256 1427 295 66 14 chr13 87965677 87966117 -32318195 + Lx9 LINE L1 6311 6773 -871 5 1256 323 292 3 13 chr13 87966868 87966953 -32317359 + PB1D10 SINE Alu 30 115 -34 5 1256 367 246 70 87 chr13 87967075 87967264 -32317048 + B3A SINE B2 30 198 0 5 1256 258 320 0 13 chr13 87967302 87967378 -32316934 + C-rich Low_complexity Low_complexity 6 80 0 5 1256 1328 46 0 9 chr13 87967404 87967622 -32316690 + (TCTCC)n Simple_repeat Simple_repeat 1 216 0 6 1256 384 204 11 16 chr13 87967623 87967807 -32316505 + CT-rich Low_complexity Low_complexity 1 182 0 6 1256 684 64 0 0 chr13 87967812 87967906 -32316406 + (TC)n Simple_repeat Simple_repeat 2 95 0 6 1256 5138 203 68 89 chr13 87967998 87969220 -32315092 - Lx3C LINE L1 -2 6974 5795 6 1256 1133 81 0 7 chr13 87969220 87969369 -32314943 - B1_Mus1 SINE Alu 0 148 1 6 1256 5138 190 42 2 chr13 87969369 87969818 -32314494 - Lx3C LINE L1 -1182 5794 5322 6 1256 2704 172 21 0 chr13 87969822 87970352 -32313960 + L1_Mur2 LINE L1 4353 4893 -984 6 1256 286 117 56 144 chr13 87970357 87970447 -32313865 - Lx3C LINE L1 -848 5038 4957 6 1256 1804 279 51 32 chr13 87970480 87971227 -32313085 + Lx9 LINE L1 6868 7628 -16 5 1256 539 322 67 39 chr13 87971945 87972200 -32312112 - MT2A LTR ERVL -135 398 137 6 1256 219 244 0 0 chr13 87972256 87972301 -32312011 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1256 271 208 0 36 chr13 87972306 87972361 -32311951 - MTEa LTR MaLR -308 71 19 6 1256 832 295 52 27 chr13 87972663 87973220 -32311092 + Lx9 LINE L1 5476 6099 -1597 6 1256 5399 160 10 4 chr13 87973716 87974656 -32309656 - Lx3B LINE L1 -3 6970 6026 6 1256 185 146 0 20 chr13 87974666 87974715 -32309597 + C-rich Low_complexity Low_complexity 3 50 0 6 1256 1937 141 23 55 chr13 87974723 87975122 -32309190 - L1_Mur1 LINE L1 -495 5391 5006 6 1256 7366 190 12 13 chr13 87975122 87976678 -32307634 - MurERV4_19-int LTR ERVK -1460 4320 2766 6 1256 1113 158 65 9 chr13 87976691 87976921 -32307391 - Lx2 LINE L1 0 6997 6755 6 1256 3975 198 56 46 chr13 87976925 87977959 -32306353 + Lx LINE L1 3051 4094 -1783 6 1256 25072 72 1 1 chr13 87977960 87982046 -32302266 - L1Md_F2 LINE L1 -1 6581 2497 6 1256 6525 111 5 1 chr13 87982046 87983367 -32300945 - L1Md_F2 LINE L1 -4339 1544 284 6 1256 7624 214 24 48 chr13 87983367 87984043 -32300269 + Lx LINE L1 4085 4767 -1887 6 1256 353 105 91 0 chr13 87984043 87984115 -32300197 + B1_Mus2 SINE Alu 65 149 -1 6 1256 7624 214 24 48 chr13 87984115 87985976 -32298336 + Lx LINE L1 4768 6650 -4 6 1256 29 0 0 0 chr13 87986544 87986573 -32297739 + AT_rich Low_complexity Low_complexity 1 29 0 6 1256 31 58 0 0 chr13 87986615 87986667 -32297645 + AT_rich Low_complexity Low_complexity 1 52 0 6 1256 9472 132 49 11 chr13 87987070 87989471 -32294841 + L1_Mus3 LINE L1 4124 6634 -4 6 1256 753 43 34 0 chr13 87989949 87990066 -32294246 + (TTTTG)n Simple_repeat Simple_repeat 2 122 0 6 1256 4044 113 45 58 chr13 87991157 87991918 -32292394 + RMER17A LTR ERVK 1 751 0 6 1256 459 202 29 14 chr13 87991924 87992055 -32292257 - Lx2 LINE L1 -6 6994 6864 6 1256 1682 239 50 5 chr13 87992055 87992454 -32291858 + MTC LTR MaLR 5 421 0 6 1256 305 295 81 16 chr13 87992810 87993068 -32291244 - L1M5 LINE L1 -3137 3009 2735 6 1256 1028 107 7 0 chr13 87993395 87993545 -32290767 - L1_Mus2 LINE L1 0 6566 6416 6 1256 2280 70 3 32 chr13 87993556 87993868 -32290444 + L1_Mus2 LINE L1 6120 6422 -144 6 1256 23 0 0 0 chr13 87993983 87994006 -32290306 + AT_rich Low_complexity Low_complexity 1 23 0 6 1256 21 0 0 0 chr13 87994443 87994464 -32289848 + AT_rich Low_complexity Low_complexity 1 21 0 6 1256 241 188 68 19 chr13 87994550 87994653 -32289659 + (TCTA)n Simple_repeat Simple_repeat 1 108 0 6 1256 234 364 36 0 chr13 87994723 87994863 -32289449 - Lx9 LINE L1 -266 7378 7234 6 1256 3418 156 38 2 chr13 87995009 87995589 -32288723 - MT2B LTR ERVL 0 601 1 6 1256 322 293 155 32 chr13 87995640 87995795 -32288517 + Lx9 LINE L1 6305 6478 -1166 6 1256 1376 283 44 42 chr13 87995973 87996544 -32287768 + Lx9 LINE L1 6839 7410 -234 6 1256 3580 133 102 50 chr13 87996545 87997259 -32287053 - RMER17A LTR ERVK 0 751 1 6 1256 479 279 115 56 chr13 87997430 87997856 -32286456 - L1_Rod LINE L1 -495 5805 5287 6 1256 312 219 61 79 chr13 87997968 87998082 -32286230 - L1_Mur3 LINE L1 -1068 4812 4701 6 1256 3429 25 2 0 chr13 87998282 87998677 -32285635 - MTA_Mm LTR MaLR 0 396 1 6 1256 343 368 66 24 chr13 87998682 87999063 -32285249 - L1_Rod LINE L1 -1623 4520 4124 6 1256 1675 229 50 24 chr13 87999073 87999449 -32284863 + MTC LTR MaLR 9 394 -27 6 1256 858 221 179 5 chr13 87999559 87999782 -32284530 - Lx4B LINE L1 -179 6879 6618 6 1256 281 164 16 16 chr13 87999784 87999846 -32284466 - Lx5 LINE L1 -646 6404 6343 6 1256 5411 169 54 20 chr13 88000224 88001298 -32283014 - Lx4A LINE L1 -3 7055 5945 1 1256 218 179 0 35 chr13 88001390 88001448 -32282864 + (TTTG)n Simple_repeat Simple_repeat 1 56 0 2 1256 258 32 0 0 chr13 88001448 88001479 -32282833 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 3 1256 1641 124 4 19 chr13 88001479 88001750 -32282562 + Lx4A LINE L1 5690 5956 -1102 4 1256 262 317 34 31 chr13 88001786 88001909 -32282403 - B1_Mur2 SINE Alu -16 133 10 5 1256 238 246 0 0 chr13 88002037 88002094 -32282218 - L1MD LINE L1 -2925 3221 3165 6 1256 36 62 0 0 chr13 88002844 88002908 -32281404 + AT_rich Low_complexity Low_complexity 1 64 0 7 1256 23 33 0 0 chr13 88002953 88002983 -32281329 + AT_rich Low_complexity Low_complexity 1 30 0 8 1256 303 28 0 0 chr13 88003080 88003116 -32281196 + (TA)n Simple_repeat Simple_repeat 2 37 0 9 1256 21 36 0 0 chr13 88003436 88003464 -32280848 + AT_rich Low_complexity Low_complexity 1 28 0 1 1256 290 342 145 13 chr13 88004450 88004912 -32279400 - Lx9 LINE L1 -48 7596 7074 1 1256 261 288 0 0 chr13 88004920 88004986 -32279326 + Lx9 LINE L1 6826 6891 -753 1 1256 1884 57 4 12 chr13 88005018 88005268 -32279044 + L1Md_F3 LINE L1 6336 6583 -1 1 1256 321 295 30 8 chr13 88005282 88005415 -32278897 + Lx9 LINE L1 6895 7030 -614 1 1256 35 95 0 0 chr13 88005568 88005673 -32278639 + AT_rich Low_complexity Low_complexity 1 105 0 1 1256 600 191 27 7 chr13 88005952 88006100 -32278212 - Lx4B LINE L1 -4 7054 6904 1 1256 250 274 14 0 chr13 88006100 88006173 -32278139 + L1M2 LINE L1 5708 5781 -516 1 1256 2287 78 119 11 chr13 88006274 88006626 -32277686 - RLTR10 LTR ERVK 0 390 1 1 1256 594 335 63 51 chr13 88006683 88007220 -32277092 + Lx8 LINE L1 6575 7260 -384 1 1256 571 260 68 38 chr13 88008230 88008478 -32275834 - LTRIS4 LTR ERV1 0 519 276 1 1256 21 0 0 0 chr13 88009393 88009414 -32274898 + AT_rich Low_complexity Low_complexity 1 21 0 2 1256 1267 264 27 3 chr13 88009729 88010026 -32274286 + Lx5 LINE L1 6432 6735 -315 2 1256 2620 124 16 16 chr13 88010047 88010474 -32273838 - L1_Mus4 LINE L1 -1 6635 6209 2 1256 2101 61 95 3 chr13 88010474 88010770 -32273542 + L1_Mus4 LINE L1 5880 6202 -434 2 1256 972 262 151 0 chr13 88010766 88011045 -32273267 + Lx5 LINE L1 6730 7050 0 2 1256 267 31 0 0 chr13 88012640 88012672 -32271640 + (TC)n Simple_repeat Simple_repeat 1 32 0 2 1256 25 51 0 0 chr13 88013123 88013162 -32271150 + AT_rich Low_complexity Low_complexity 1 39 0 2 1256 21 0 0 0 chr13 88013506 88013527 -32270785 + AT_rich Low_complexity Low_complexity 1 21 0 2 1256 22 56 0 0 chr13 88013754 88013790 -32270522 + AT_rich Low_complexity Low_complexity 1 36 0 2 1256 3614 171 34 0 chr13 88013803 88014458 -32269854 - Lx3B LINE L1 0 6973 6297 2 1256 3022 116 9 19 chr13 88014458 88014483 -32269829 + Lx3B LINE L1 5426 5448 -438 2 1256 270 0 0 0 chr13 88014483 88014513 -32269799 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1256 4054 134 13 14 chr13 88014513 88015345 -32268967 + Lx3B LINE L1 5449 6284 -689 2 1256 1786 219 60 40 chr13 88015751 88016269 -32268043 + RLTR11A LTR ERVK 1 528 0 3 1256 22 0 0 0 chr13 88016742 88016764 -32267548 + AT_rich Low_complexity Low_complexity 1 22 0 3 1256 662 136 8 0 chr13 88016951 88017069 -32267243 + (TA)n Simple_repeat Simple_repeat 1 119 0 3 1256 2742 68 62 5 chr13 88017114 88017486 -32266826 + MTA_Mm LTR MaLR 1 393 -3 3 1256 279 0 0 0 chr13 88017486 88017517 -32266795 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1256 1023 32 0 0 chr13 88017517 88017639 -32266673 + (TA)n Simple_repeat Simple_repeat 1 123 0 3 1256 784 197 7 0 chr13 88017674 88017816 -32266496 + B1_Mur4 SINE Alu 2 144 -6 3 1256 24964 152 24 20 chr13 88018045 88024235 -32260077 - L1_Mus3 LINE L1 -5 6633 407 3 1256 5975 175 28 11 chr13 88024576 88025712 -32258600 + Lx2 LINE L1 5822 6977 -20 3 1256 21 36 0 0 chr13 88025719 88025747 -32258565 + AT_rich Low_complexity Low_complexity 1 28 0 3 1256 357 24 0 0 chr13 88026054 88026096 -32258216 + (TTCA)n Simple_repeat Simple_repeat 3 44 0 4 1256 1383 319 17 41 chr13 88026099 88026514 -32257798 - Lx5 LINE L1 -12 7038 6634 4 1256 198 0 0 0 chr13 88027286 88027308 -32257004 + (GGAA)n Simple_repeat Simple_repeat 4 25 0 4 1256 3701 194 25 1 chr13 88027390 88028071 -32256241 + Lx4B LINE L1 6286 6982 -76 4 1256 2302 297 91 27 chr13 88028092 88028698 -32255614 + Lx7 LINE L1 5978 6618 -1078 4 1256 1026 270 128 13 chr13 88028698 88029073 -32255239 - MTC LTR MaLR -2 419 2 4 1256 2302 297 91 27 chr13 88029073 88029527 -32254785 + Lx7 LINE L1 6619 7105 -591 4 1256 343 113 0 0 chr13 88029534 88029587 -32254725 + L1Md_F LINE L1 176 228 -6291 4 1256 34393 53 27 16 chr13 88029588 88034159 -32250153 + L1Md_F LINE L1 263 4917 -966 4 1256 236 167 46 77 chr13 88034159 88034224 -32250088 - RMER20A LTR ERVK -268 248 186 4 1256 34393 53 27 16 chr13 88034224 88034879 -32249433 + L1Md_F LINE L1 4918 5586 -297 4 1256 8004 56 1 0 chr13 88034880 88035874 -32248438 + L1Md_T LINE L1 5588 6582 0 4 1256 259 95 11 77 chr13 88035980 88036071 -32248241 + T-rich Low_complexity Low_complexity 4 88 0 5 1256 197 86 57 0 chr13 88036197 88036232 -32248080 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 5 1256 246 221 0 29 chr13 88036285 88036355 -32247957 - Lx7 LINE L1 -18 7678 7611 5 1256 468 35 0 0 chr13 88036384 88036442 -32247870 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1256 25 0 0 0 chr13 88036442 88036467 -32247845 + AT_rich Low_complexity Low_complexity 1 25 0 5 1256 25605 18 0 0 chr13 88036555 88040272 -32244040 - L1Md_T LINE L1 0 6582 2867 5 1256 36043 33 0 0 chr13 88040267 88045400 -32238912 - L1Md_T LINE L1 0 6582 1450 5 1256 234 298 177 27 chr13 88045588 88045774 -32238538 - MLT1E LTR MaLR -8 645 432 5 1256 540 0 0 0 chr13 88046340 88046400 -32237912 + (TA)n Simple_repeat Simple_repeat 1 60 0 5 1256 363 23 0 0 chr13 88046401 88046445 -32237867 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1256 186 43 0 0 chr13 88047074 88047097 -32237215 + (TAAAA)n Simple_repeat Simple_repeat 4 26 0 6 1256 29 60 0 0 chr13 88047626 88047676 -32236636 + AT_rich Low_complexity Low_complexity 1 50 0 6 1256 33 66 0 0 chr13 88047790 88047851 -32236461 + AT_rich Low_complexity Low_complexity 1 61 0 6 1256 882 193 6 0 chr13 88047861 88048194 -32236118 + (TA)n Simple_repeat Simple_repeat 1 334 0 6 1256 258 116 0 0 chr13 88048992 88049035 -32235277 + (TG)n Simple_repeat Simple_repeat 1 43 0 6 1256 287 0 53 0 chr13 88049435 88049473 -32234839 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 6 1256 237 321 91 42 chr13 88049846 88049989 -32234323 - MLT1N2 LTR MaLR 0 562 413 6 1256 238 324 0 0 chr13 88050130 88050204 -32234108 + A-rich Low_complexity Low_complexity 2 75 0 6 1256 2027 169 16 13 chr13 88050244 88050628 -32233684 + Lx LINE L1 6270 6654 0 6 1256 527 96 12 0 chr13 88050650 88050733 -32233579 + (GA)n Simple_repeat Simple_repeat 1 84 0 6 1256 1372 60 6 0 chr13 88051065 88051247 -32233065 - L1_Mus3 LINE L1 -765 5873 5691 7 1256 3060 79 55 0 chr13 88051247 88051664 -32232648 + L1_Mus2 LINE L1 6127 6566 0 7 1256 882 76 0 0 chr13 88051738 88051857 -32232455 + (TA)n Simple_repeat Simple_repeat 2 120 0 7 1256 10356 126 27 10 chr13 88052086 88053835 -32230477 - L1_Mur1 LINE L1 -2179 3707 1930 7 1256 237 250 0 0 chr13 88053844 88053904 -32230408 + (TA)n Simple_repeat Simple_repeat 1 60 0 7 1256 335 266 73 0 chr13 88053906 88054030 -32230282 - RCHARR1 DNA MER1_type -776 198 66 7 1256 24 32 0 0 chr13 88054339 88054370 -32229942 + AT_rich Low_complexity Low_complexity 1 31 0 7 1256 40 83 0 0 chr13 88055362 88055458 -32228854 + AT_rich Low_complexity Low_complexity 1 96 0 7 1256 207 0 0 0 chr13 88056346 88056369 -32227943 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 7 1256 21 0 0 0 chr13 88056928 88056949 -32227363 + AT_rich Low_complexity Low_complexity 1 21 0 7 1256 5532 186 27 20 chr13 88057724 88058028 -32226284 + Lx2 LINE L1 4421 4718 -1159 8 1256 465 19 0 0 chr13 88058028 88058082 -32226230 + (CA)n Simple_repeat Simple_repeat 2 55 0 8 1256 6370 187 26 25 chr13 88058082 88059123 -32225189 + Lx2 LINE L1 4719 5827 -1170 8 1256 1041 106 0 0 chr13 88059123 88059264 -32225048 + B1_Mus1 SINE Alu 1 141 -7 8 1256 921 116 0 0 chr13 88059270 88059416 -32224896 + (GGA)n Simple_repeat Simple_repeat 3 148 0 8 1256 6370 189 25 53 chr13 88059416 88060594 -32223718 + Lx2 LINE L1 5828 6989 -8 8 1256 397 265 48 32 chr13 88060751 88060938 -32223374 + Lx7 LINE L1 7507 7696 0 8 1256 305 24 24 0 chr13 88060992 88061034 -32223278 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1256 459 52 0 0 chr13 88061034 88061091 -32223221 + (TA)n Simple_repeat Simple_repeat 2 59 0 8 1256 614 149 34 17 chr13 88061118 88061295 -32223017 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 8 1256 23 33 0 0 chr13 88061338 88061368 -32222944 + AT_rich Low_complexity Low_complexity 1 30 0 8 1256 561 313 105 31 chr13 88061420 88061905 -32222407 - L1M4 LINE L1 -1837 4309 3789 8 1256 714 255 22 48 chr13 88061964 88062191 -32222121 + Lx8 LINE L1 6229 6449 -1024 9 1256 479 247 15 27 chr13 88062711 88062888 -32221424 - MTB_Mm-int LTR MaLR -836 1127 859 9 1256 6040 77 7 7 chr13 88062888 88063832 -32220480 - L1_Mus2 LINE L1 -115 6539 5499 9 1256 352 48 0 0 chr13 88063830 88063872 -32220440 + L1_Mur1 LINE L1 5489 5530 -356 9 1256 2099 166 11 5 chr13 88063872 88064247 -32220065 - MTB_Mm-int LTR MaLR -708 390 14 9 1256 2684 108 43 3 chr13 88064258 88064649 -32219663 - MTB_Mm LTR MaLR 0 407 1 9 1256 685 130 43 0 chr13 88064698 88064813 -32219499 - Lx LINE L1 -697 5957 5838 9 1256 4059 134 26 14 chr13 88064816 88065474 -32218838 + Lx LINE L1 5982 6647 -7 9 1256 28 0 0 0 chr13 88065474 88065502 -32218810 + AT_rich Low_complexity Low_complexity 1 28 0 9 1256 236 30 30 0 chr13 88065810 88065843 -32218469 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 9 1256 1079 90 0 14 chr13 88065843 88065980 -32218332 - B1_Mus2 SINE Alu -10 137 1 9 1256 569 290 54 145 chr13 88066763 88067170 -32217142 + MTE2a LTR MaLR 1 370 -9 9 1256 342 0 0 0 chr13 88067497 88067535 -32216777 + (TTTTG)n Simple_repeat Simple_repeat 4 41 0 9 1256 1919 201 141 37 chr13 88068936 88069561 -32214751 - RMER6C LTR ERVK 0 690 1 1 1256 22 94 0 0 chr13 88069796 88069860 -32214452 + AT_rich Low_complexity Low_complexity 1 64 0 1 1256 399 318 0 8 chr13 88069960 88070093 -32214219 + Lx8 LINE L1 6299 6430 -1043 1 1256 353 317 78 47 chr13 88070147 88070276 -32214036 + RSINE1 SINE B4 6 138 -27 1 1256 5066 131 4 4 chr13 88070412 88071465 -32212847 - L1_Mus3 LINE L1 -595 6041 4987 1 1256 3242 156 23 3 chr13 88071465 88072032 -32212280 + L1_Mus3 LINE L1 6059 6636 -2 1 1256 28 86 0 0 chr13 88072135 88072205 -32212107 + AT_rich Low_complexity Low_complexity 1 70 0 1 1256 32 57 0 0 chr13 88073076 88073129 -32211183 + AT_rich Low_complexity Low_complexity 1 53 0 1 1256 37535 46 0 4 chr13 88073364 88079644 -32204668 - L1Md_A LINE L1 0 6585 234 1 1256 262 45 22 22 chr13 88080006 88080051 -32204261 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1 19 2846 161 90 0 chr13 88080108 88080617 -32203695 - Lx3B LINE L1 -13 6960 6406 1 1257 348 161 0 0 chr13 88081049 88081111 -32203201 + GA-rich Low_complexity Low_complexity 1 62 0 1 1257 537 303 164 27 chr13 88081755 88082032 -32202280 - L1MA8 LINE L1 -192 6099 5782 1 1257 338 61 20 0 chr13 88082032 88082081 -32202231 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1 1257 960 138 0 0 chr13 88082081 88082226 -32202086 - B1_Mus1 SINE Alu -3 145 1 1 1257 537 303 164 27 chr13 88082226 88082473 -32201839 - L1MA8 LINE L1 -510 5781 5503 1 1257 394 295 99 24 chr13 88082536 88082773 -32201539 - HAL1-3A_ME LINE L1 -410 2448 2282 1 1257 642 86 11 0 chr13 88083261 88083354 -32200958 + L1Md_F3 LINE L1 5992 6085 -499 1 1257 35 41 0 0 chr13 88083857 88083906 -32200406 + AT_rich Low_complexity Low_complexity 1 49 0 1 1257 2301 156 69 22 chr13 88084268 88084715 -32199597 - Lx2 LINE L1 -1 6996 6529 1 1257 3009 48 8 0 chr13 88084907 88085286 -32199026 + L1Md_F2 LINE L1 6190 6571 -11 1 1257 668 222 0 6 chr13 88086310 88086491 -32197821 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 1257 1255 152 235 4 chr13 88087163 88087414 -32196898 - Lx2 LINE L1 -2 6995 6687 1 1257 993 85 7 0 chr13 88087642 88087795 -32196517 - L1_Mur2 LINE L1 -5783 929 776 1 1257 565 254 91 25 chr13 88087832 88088030 -32196282 - B3 SINE B2 -5 211 1 1 1257 477 0 0 0 chr13 88088150 88088203 -32196109 + (CTA)n Simple_repeat Simple_repeat 1 53 0 1 1257 347 0 23 0 chr13 88088401 88088444 -32195868 + (GAAA)n Simple_repeat Simple_repeat 4 47 0 1 1257 497 242 0 68 chr13 88088547 88088724 -32195588 - Lx LINE L1 -26 7434 7270 1 1257 3017 181 66 20 chr13 88088801 88089368 -32194944 - Lx LINE L1 0 6654 6058 1 1257 2688 120 12 7 chr13 88089368 88089787 -32194525 + BGLII LTR ERVK 1 421 0 1 1257 3017 181 66 20 chr13 88089787 88089826 -32194486 - Lx LINE L1 -597 6057 6020 1 1257 2558 201 36 45 chr13 88089814 88090398 -32193914 - L1_Mur2 LINE L1 -5925 787 209 1 1257 229 189 0 0 chr13 88091429 88091482 -32192830 + Lx9 LINE L1 7583 7635 -9 1 1257 29 94 0 0 chr13 88091489 88091574 -32192738 + AT_rich Low_complexity Low_complexity 1 85 0 1 1257 319 247 56 0 chr13 88092279 88092368 -32191944 + Lx9 LINE L1 6592 6685 -959 1 1257 571 288 27 37 chr13 88092371 88092606 -32191706 - Lx9 LINE L1 -1069 6575 6262 1 1257 36 40 0 0 chr13 88092903 88092953 -32191359 + AT_rich Low_complexity Low_complexity 1 50 0 1 1257 27 0 0 0 chr13 88093526 88093553 -32190759 + AT_rich Low_complexity Low_complexity 1 27 0 1 1257 275 0 29 0 chr13 88094118 88094153 -32190159 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1257 1014 102 0 0 chr13 88094796 88094933 -32189379 + B1_Mus2 SINE Alu 2 138 -9 1 1257 246 22 64 21 chr13 88094933 88094980 -32189332 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 1 1257 3620 111 13 15 chr13 88094989 88095530 -32188782 + MT2B2 LTR ERVL 23 562 -22 1 1257 732 205 270 39 chr13 88095924 88096157 -32188155 - Lx9 LINE L1 -576 7068 6782 1 1257 1099 272 55 23 chr13 88096161 88096545 -32187767 + Lx9 LINE L1 7087 7482 -162 1 1257 31 0 0 0 chr13 88096602 88096633 -32187679 + AT_rich Low_complexity Low_complexity 1 31 0 1 1257 268 345 0 87 chr13 88096642 88096734 -32187578 + B4A SINE B4 3 86 -206 1 1257 1114 90 0 0 chr13 88096753 88096898 -32187414 + B1_Mus2 SINE Alu 3 147 0 1 1257 228 67 0 0 chr13 88096933 88096963 -32187349 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 1257 253 396 10 0 chr13 88096965 88097066 -32187246 + B4A SINE B4 91 192 -100 1 1257 1163 94 0 27 chr13 88097253 88097438 -32186874 + (TC)n Simple_repeat Simple_repeat 1 180 0 1 1257 315 0 0 0 chr13 88097442 88097477 -32186835 + (TTTC)n Simple_repeat Simple_repeat 4 38 0 1 1257 232 254 0 0 chr13 88097762 88097817 -32186495 + B4A SINE B4 183 237 -55 1 1257 1816 107 6 66 chr13 88098000 88098319 -32185993 + L1_Mus2 LINE L1 6263 6562 -4 1 1257 22 0 0 0 chr13 88098542 88098564 -32185748 + AT_rich Low_complexity Low_complexity 1 22 0 1 1257 839 283 112 40 chr13 88098647 88099462 -32184850 - Lx9 LINE L1 -1596 6048 5171 1 1257 212 54 0 51 chr13 88099477 88099516 -32184796 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 1 1257 415 199 70 49 chr13 88099580 88099723 -32184589 - Lx9 LINE L1 -767 5080 4935 1 1257 335 274 139 29 chr13 88099765 88099938 -32184374 - Lx9 LINE L1 -1911 3936 3745 1 1257 3048 272 80 37 chr13 88099944 88101574 -32182738 - Lx9 LINE L1 -2403 3444 1744 1 1257 504 291 75 11 chr13 88101551 88102063 -32182249 - Lx9 LINE L1 -4396 1451 900 1 1257 912 125 29 0 chr13 88102272 88102408 -32181904 + B1_Mus1 SINE Alu 2 141 -7 1 1257 203 239 0 0 chr13 88102744 88102790 -32181522 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1257 2657 151 2 28 chr13 88103953 88104410 -32179902 - Lx LINE L1 -7 6647 6203 1 1257 5503 161 16 3 chr13 88104410 88105378 -32178934 - L1_Mm LINE L1 -125 5758 4778 1 1257 225 0 0 0 chr13 88105998 88106023 -32178289 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1257 3598 15 0 0 chr13 88106455 88106865 -32177447 - L1Md_A LINE L1 -2 6580 6171 1 1257 512 361 15 20 chr13 88107744 88107942 -32176370 + ID_B1 SINE B4 3 199 -25 1 1257 249 163 0 0 chr13 88107967 88108016 -32176296 + A-rich Low_complexity Low_complexity 1 49 0 1 1257 23 33 0 0 chr13 88108049 88108079 -32176233 + AT_rich Low_complexity Low_complexity 1 30 0 1 1257 300 154 0 0 chr13 88108130 88108182 -32176130 - Lx4B LINE L1 -1227 5831 5780 1 1257 5277 199 40 6 chr13 88108196 88109309 -32175003 + Lx3C LINE L1 5825 6974 -2 1 1257 222 118 0 0 chr13 88110382 88110416 -32173896 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1257 2167 225 49 79 chr13 88111315 88112341 -32171971 + L1Md_F LINE L1 204 1096 -5441 1 1257 20731 71 5 1 chr13 88112348 88115869 -32168443 - L1Md_F2 LINE L1 -3 6579 3048 1 1257 16757 131 8 16 chr13 88115864 88118197 -32166115 + L1VL1 LINE L1 1003 3421 -2465 1 1257 1006 104 0 0 chr13 88118197 88118332 -32165980 - B1_Mus1 SINE Alu -12 136 2 1 1257 16757 132 9 16 chr13 88118332 88118979 -32165333 + L1VL1 LINE L1 3422 4035 -1851 1 1257 643 107 18 0 chr13 88119072 88119184 -32165128 - Lx LINE L1 -7 6647 6534 1 1257 726 201 7 0 chr13 88119189 88119343 -32164969 - L1_Mur2 LINE L1 -561 5316 5162 1 1257 1072 253 96 143 chr13 88119343 88119935 -32164377 - RMER19C LTR ERVK -4 898 129 1 1257 2479 85 0 3 chr13 88119939 88120269 -32164043 - L1_Mus2 LINE L1 -160 6406 6078 1 1257 513 121 0 0 chr13 88120285 88120368 -32163944 + (TG)n Simple_repeat Simple_repeat 2 84 0 1 1257 459 329 40 0 chr13 88120375 88120527 -32163785 + Lx9 LINE L1 6362 6519 -1125 1 1257 792 294 59 50 chr13 88120583 88121258 -32163054 + Lx9 LINE L1 6785 7501 -143 1 1257 22 35 0 0 chr13 88121385 88121414 -32162898 + AT_rich Low_complexity Low_complexity 1 29 0 1 1257 1424 206 65 25 chr13 88121478 88121831 -32162481 - ORR1B2 LTR MaLR 0 367 1 1 1257 1732 67 4 0 chr13 88121948 88122173 -32162139 + L1_Mus3 LINE L1 6121 6346 -292 1 1257 1384 131 47 0 chr13 88122171 88122385 -32161927 - Lx2 LINE L1 -171 6826 6603 1 1257 1887 129 10 0 chr13 88122398 88122692 -32161620 + L1_Mus3 LINE L1 6336 6632 -6 1 1257 35 24 0 0 chr13 88122953 88122995 -32161317 + AT_rich Low_complexity Low_complexity 1 42 0 1 1257 7232 115 12 8 chr13 88123071 88124338 -32159974 - Lx3_Mus LINE L1 -276 6733 5462 1 1257 1482 166 0 67 chr13 88124338 88124654 -32159658 + Lx3A LINE L1 6684 6978 -3 1 1257 21 36 0 0 chr13 88124654 88124682 -32159630 + AT_rich Low_complexity Low_complexity 1 28 0 1 1257 2709 116 2 5 chr13 88124950 88125350 -32158962 - MTB_Mm LTR MaLR -8 399 1 1 1257 291 141 0 0 chr13 88125838 88125902 -32158410 + (T)n Simple_repeat Simple_repeat 1 64 0 1 1257 413 309 10 0 chr13 88125957 88126054 -32158258 + RSINE1 SINE B4 2 99 -66 1 1257 483 191 0 18 chr13 88126071 88126183 -32158129 + Lx3A LINE L1 6869 6978 -3 1 1257 23 33 0 0 chr13 88126190 88126220 -32158092 + AT_rich Low_complexity Low_complexity 1 30 0 1 1257 210 295 0 0 chr13 88126833 88126938 -32157374 + (CA)n Simple_repeat Simple_repeat 1 105 0 1 1257 191 116 47 0 chr13 88127143 88127186 -32157126 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 1 1257 521 323 57 31 chr13 88127734 88127850 -32156462 + ORR1D1 LTR MaLR 142 264 -110 1 1257 956 234 14 5 chr13 88127850 88128073 -32156239 - URR1A DNA MER1_type 0 226 2 1 1257 521 323 57 31 chr13 88128073 88128183 -32156129 + ORR1D1 LTR MaLR 265 374 0 1 1257 909 297 64 26 chr13 88128676 88129079 -32155233 + RMER15 LTR ERVL 32 514 -61 1 1257 3482 18 2 0 chr13 88129079 88129474 -32154838 - MTA_Mm LTR MaLR 0 396 1 1 1257 9581 16 2 0 chr13 88129474 88130570 -32153742 - MTA_Mm-int LTR MaLR 0 1098 1 1 1257 3482 18 2 0 chr13 88130570 88130965 -32153347 - MTA_Mm LTR MaLR 0 396 1 1 1257 909 309 70 27 chr13 88130965 88131023 -32153289 + RMER15 LTR ERVL 515 573 -2 1 1257 338 281 105 20 chr13 88131076 88131276 -32153036 - L1M4 LINE L1 -3178 2968 2752 1 1257 1191 29 0 0 chr13 88131279 88131417 -32152895 + B1_Mus1 SINE Alu 1 138 -10 1 1257 347 0 0 23 chr13 88131417 88131461 -32152851 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1 1257 23 0 0 0 chr13 88131594 88131617 -32152695 + AT_rich Low_complexity Low_complexity 1 23 0 1 1257 5660 12 0 0 chr13 88132494 88133136 -32151176 - L1_Mm LINE L1 -197 5686 5045 1 1257 8357 31 2 0 chr13 88133136 88134123 -32150189 + L1Md_T LINE L1 5594 6582 0 1 1257 264 288 0 40 chr13 88134550 88134626 -32149686 + B1F SINE Alu 67 139 -10 1 1257 350 229 0 0 chr13 88134648 88134709 -32149603 + ID4_ SINE ID 1 61 -22 1 1257 3826 261 31 42 chr13 88134821 88135940 -32148372 - Lx6 LINE L1 -373 7087 5981 1 1257 872 192 66 0 chr13 88135947 88136129 -32148183 + L1_Mur3 LINE L1 3488 3681 -2199 1 1257 2185 198 44 16 chr13 88136131 88136630 -32147682 + L1_Mur3 LINE L1 3966 4478 -1402 1 1257 24 32 0 0 chr13 88136863 88136894 -32147418 + AT_rich Low_complexity Low_complexity 1 31 0 2 1257 770 277 106 73 chr13 88137542 88137709 -32146603 + RMER10A LTR ERVL 3 158 -284 2 1257 246 32 0 0 chr13 88137709 88137740 -32146572 + (TTCCC)n Simple_repeat Simple_repeat 1 31 0 2 1257 770 277 106 73 chr13 88137740 88137997 -32146315 + RMER10A LTR ERVL 159 441 -1 2 1257 197 65 0 31 chr13 88137997 88138029 -32146283 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2 1257 227 109 127 0 chr13 88139090 88139145 -32145167 + (TTATA)n Simple_repeat Simple_repeat 3 64 0 2 1257 189 195 0 0 chr13 88139184 88139225 -32145087 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 2 1257 525 32 0 0 chr13 88139227 88139290 -32145022 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 1257 296 284 40 118 chr13 88139485 88139637 -32144675 + RMER10A LTR ERVL 29 168 -274 2 1257 235 61 0 29 chr13 88139619 88139653 -32144659 + RMER10A LTR ERVL 22 54 -388 2 1257 196 30 61 0 chr13 88139924 88139957 -32144355 + (CAAAAA)n Simple_repeat Simple_repeat 4 38 0 2 1257 438 237 134 67 chr13 88140030 88140356 -32143956 + RMER17C-int LTR ERVK 2610 2830 -408 2 1257 208 0 62 0 chr13 88140356 88140388 -32143924 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1257 438 278 106 63 chr13 88140388 88140508 -32143804 + RMER17C-int LTR ERVK 2831 2973 -265 2 1257 336 298 40 50 chr13 88140747 88140846 -32143466 + RMER10A LTR ERVL 3 100 -342 2 1257 367 286 59 114 chr13 88140858 88141130 -32143182 + RMER10A LTR ERVL 173 429 -13 2 1257 396 0 0 0 chr13 88141386 88141430 -32142882 + (TA)n Simple_repeat Simple_repeat 1 44 0 2 1257 1148 62 7 0 chr13 88141570 88141716 -32142596 + B1_Mm SINE Alu 1 147 0 2 1257 235 196 77 19 chr13 88143083 88143135 -32141177 + MLT2B5 LTR ERVL 1 55 -662 2 1257 1613 120 100 57 chr13 88143354 88143654 -32140658 - Lx LINE L1 0 6654 6342 2 1257 1611 281 119 28 chr13 88144408 88144953 -32139359 + RMER20B LTR ERVK 10 604 -23 2 1257 303 304 144 7 chr13 88145263 88145409 -32138903 - MER5A1 DNA MER1_type 0 166 1 2 1257 951 321 47 9 chr13 88146554 88146981 -32137331 - MMERGLN-int LTR ERV1 -2324 5232 4790 2 1257 437 244 62 76 chr13 88147015 88147198 -32137114 + RLTR6-int LTR ERV1 5077 5322 -2456 2 1257 573 357 33 64 chr13 88147263 88148190 -32136122 - MMERGLN-int LTR ERV1 -4507 3271 2446 2 1257 467 141 0 21 chr13 88148484 88148578 -32135734 + L1_Mur3 LINE L1 3295 3386 -2494 2 1257 5132 71 0 5 chr13 88148640 88149308 -32135004 - L1Md_F2 LINE L1 -1 6581 5917 2 1257 31264 92 6 6 chr13 88149308 88154394 -32129918 - L1Md_F2 LINE L1 -419 5464 382 2 1257 470 62 0 0 chr13 88154407 88154472 -32129840 - L1_Mus2 LINE L1 0 6566 6502 2 1257 29 47 0 0 chr13 88154645 88154688 -32129624 + AT_rich Low_complexity Low_complexity 1 43 0 2 1257 250 347 113 0 chr13 88155184 88155308 -32129004 - B1F SINE Alu 0 149 12 2 1257 601 97 17 17 chr13 88155680 88155796 -32128516 - L1_Mus3 LINE L1 0 6638 6523 2 1257 622 306 19 33 chr13 88157798 88158011 -32126301 - B3 SINE B2 -6 210 1 2 1257 33 56 0 0 chr13 88159335 88159389 -32124923 + AT_rich Low_complexity Low_complexity 1 54 0 2 1257 2123 121 39 0 chr13 88159934 88160265 -32124047 + L1_Mus3 LINE L1 6290 6633 -5 2 1257 1009 178 0 24 chr13 88162066 88162233 -32122079 - B2_Mm2 SINE B2 -31 164 2 2 1257 368 131 0 14 chr13 88162457 88162527 -32121785 + (TA)n Simple_repeat Simple_repeat 2 70 0 2 1257 30 27 0 0 chr13 88162545 88162582 -32121730 + AT_rich Low_complexity Low_complexity 1 37 0 2 1257 964 276 38 38 chr13 88162944 88163052 -32121260 - Lx7 LINE L1 -1688 6008 5904 2 1257 737 22 11 0 chr13 88163052 88163143 -32121169 + (CA)n Simple_repeat Simple_repeat 1 92 0 2 1257 964 277 36 35 chr13 88163143 88163510 -32120802 - Lx7 LINE L1 -1793 5903 5531 2 1257 2664 279 83 7 chr13 88163514 88164361 -32119951 + RLTR25A LTR ERVK 2 912 -191 2 1257 744 275 35 3 chr13 88164475 88164763 -32119549 - Lx7 LINE L1 -361 5519 5223 2 1257 333 47 0 0 chr13 88164964 88165007 -32119305 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1257 228 221 67 34 chr13 88165155 88165244 -32119068 - Lx9 LINE L1 -9 7635 7544 2 1257 463 299 2 27 chr13 88165371 88165564 -32118748 + MTE2b LTR MaLR 3 182 -197 2 1257 495 296 43 133 chr13 88165705 88166005 -32118307 + RLTR9A LTR ERVK 5 277 -91 2 1257 932 147 0 0 chr13 88166254 88166390 -32117922 + B1_Mus2 SINE Alu 1 136 -11 2 1257 3466 307 45 33 chr13 88166631 88170261 -32114051 + ETnERV2-int LTR ERVK 493 4812 -2594 2 1257 16805 102 30 183 chr13 88170291 88174491 -32109821 - L1Md_F2 LINE L1 -6 6576 3479 2 1257 221 0 35 0 chr13 88174491 88174520 -32109792 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 2 1257 16805 108 33 236 chr13 88174520 88175833 -32108479 - L1Md_F2 LINE L1 -2405 3478 2036 2 1257 7336 94 11 0 chr13 88175846 88177596 -32106716 - L1_Mus2 LINE L1 0 6567 4800 2 1257 325 64 0 0 chr13 88177596 88177643 -32106669 + L1_Mus2 LINE L1 6518 6564 -2 2 1257 2527 122 0 0 chr13 88177652 88178012 -32106300 + L1_Mm LINE L1 5309 5668 -215 2 1257 4201 133 30 39 chr13 88178010 88178839 -32105473 - MusHAL1 LINE L1 -1867 845 24 2 1257 234 0 0 0 chr13 88178839 88178865 -32105447 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2 1257 2809 212 34 15 chr13 88178865 88179386 -32104926 - L1VL4 LINE L1 -5432 870 131 2 1257 6096 221 46 21 chr13 88179403 88180777 -32103535 + ETnERV2-int LTR ERVK 4798 6205 -1201 2 1257 820 280 61 95 chr13 88181266 88181476 -32102836 + RLTR9A LTR ERVK 1 197 -171 2 1257 216 0 0 0 chr13 88181476 88181500 -32102812 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2 1257 820 280 61 95 chr13 88181500 88181668 -32102644 + RLTR9A LTR ERVK 198 366 -2 2 1257 267 257 14 0 chr13 88181679 88181753 -32102559 + MTEb LTR MaLR 305 379 0 2 1257 22 35 0 0 chr13 88182448 88182477 -32101835 + AT_rich Low_complexity Low_complexity 1 29 0 2 1257 21 57 0 0 chr13 88182969 88183004 -32101308 + AT_rich Low_complexity Low_complexity 1 35 0 2 1257 425 311 38 0 chr13 88183427 88183610 -32100702 - L1MA5 LINE L1 -1 6299 6110 2 1257 36791 51 3 5 chr13 88184140 88190258 -32094054 - L1Md_T LINE L1 -4 6581 380 2 1257 495 356 109 42 chr13 88190343 88190621 -32093691 + ORR1D2 LTR MaLR 3 287 -72 2 1257 306 0 0 0 chr13 88190621 88190655 -32093657 + (TA)n Simple_repeat Simple_repeat 2 35 0 2 1257 369 0 0 0 chr13 88190655 88190695 -32093617 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1257 489 356 110 43 chr13 88190695 88190745 -32093567 + ORR1D2 LTR MaLR 288 352 -7 2 1257 2396 93 0 14 chr13 88191099 88191448 -32092864 - L1Md_F2 LINE L1 -12 6570 6227 2 1257 1414 47 0 0 chr13 88191448 88191617 -32092695 + L1Md_F2 LINE L1 6066 6234 -348 2 1257 23 33 0 0 chr13 88191767 88191797 -32092515 + AT_rich Low_complexity Low_complexity 1 30 0 2 1257 226 250 0 29 chr13 88191988 88192058 -32092254 + (CAGAGA)n Simple_repeat Simple_repeat 5 72 0 2 1257 1306 273 50 34 chr13 88192074 88192579 -32091733 - RMER5 LTR ERV1 -20 514 2 2 1257 477 305 134 53 chr13 88192634 88192880 -32091432 - B4A SINE B4 -25 267 2 2 1257 252 346 37 31 chr13 88192914 88193105 -32091207 + L1M2 LINE L1 2569 2760 -3383 2 1257 237 286 0 0 chr13 88193198 88193261 -32091051 - L1MCb LINE L1 -5156 889 827 2 1257 279 0 0 0 chr13 88193435 88193466 -32090846 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 2 1257 814 260 40 14 chr13 88193615 88193837 -32090475 - MTC LTR MaLR 0 421 194 2 1257 357 320 16 0 chr13 88193865 88193990 -32090322 - MTC LTR MaLR -287 132 6 2 1257 1170 210 0 0 chr13 88194351 88194613 -32089699 + MusHAL1 LINE L1 1707 1968 -744 2 1257 2460 179 16 4 chr13 88194590 88195077 -32089235 + L1_Mur2 LINE L1 3696 4188 -1689 2 1257 1799 193 82 47 chr13 88196016 88196930 -32087382 + MYSERV16_I-int LTR ERVK 437 2183 -659 2 1257 812 194 105 0 chr13 88196928 88197119 -32087193 + MYSERV16_I-int LTR ERVK 1841 2051 -275 2 1257 1573 199 80 0 chr13 88197125 88197437 -32086875 - RLTR20B1 LTR ERVK -225 338 2 2 1257 940 209 55 4 chr13 88197440 88197695 -32086617 - MYSERV16_I-int LTR ERVK -2 2324 2057 2 1257 4509 118 32 8 chr13 88198630 88199385 -32084927 + Lx3_Mus LINE L1 1349 2121 -3765 2 1257 359 58 0 37 chr13 88199402 88199456 -32084856 - L1_Mur1 LINE L1 -1986 3900 3849 2 1257 237 213 16 32 chr13 88199433 88199496 -32084816 + Lx3_Mus LINE L1 2101 2162 -3724 2 1257 13680 114 49 11 chr13 88199496 88201152 -32083160 + Lx3_Mus LINE L1 3537 5251 -635 2 1257 264 30 0 0 chr13 88201152 88201185 -32083127 + (CAA)n Simple_repeat Simple_repeat 2 34 0 2 1257 13680 115 47 10 chr13 88201185 88201850 -32082462 + Lx3_Mus LINE L1 5252 5948 -1033 2 1257 2920 141 39 17 chr13 88201850 88202385 -32081927 + Lx3_Mus LINE L1 6446 6992 -17 2 1257 330 26 0 0 chr13 88202386 88202425 -32081887 + (TTAA)n Simple_repeat Simple_repeat 3 41 0 2 1257 279 0 0 0 chr13 88202600 88202631 -32081681 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1257 21 36 0 0 chr13 88202690 88202718 -32081594 + AT_rich Low_complexity Low_complexity 1 28 0 2 1257 518 218 134 13 chr13 88202869 88203018 -32081294 + RLTR20A2 LTR ERVK 1 167 -384 2 1257 1372 152 65 8 chr13 88202995 88203241 -32081071 - MT2C_Mm LTR ERVL -6 469 210 2 1257 1318 296 29 42 chr13 88203245 88203598 -32080714 + RLTR20A2 LTR ERVK 130 479 -99 2 1257 423 0 0 0 chr13 88203598 88203645 -32080667 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1257 1318 296 29 42 chr13 88203645 88203746 -32080566 + RLTR20A2 LTR ERVK 480 578 0 2 1257 4130 98 2 0 chr13 88203784 88204589 -32079723 - L1_Mus1 LINE L1 -460 6107 5301 2 1257 3567 77 2 0 chr13 88204592 88205058 -32079254 + L1_Mus1 LINE L1 6100 6566 -1 2 1257 367 366 52 11 chr13 88205650 88205824 -32078488 + L3 LINE CR1 4303 4483 -6 2 1257 477 50 0 0 chr13 88206491 88206551 -32077761 + (TTA)n Simple_repeat Simple_repeat 3 62 0 2 1257 400 144 10 40 chr13 88206648 88206760 -32077552 - L1Md_F3 LINE L1 0 6584 6487 2 1257 217 100 20 20 chr13 88206760 88206799 -32077513 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 2 1257 283 247 63 21 chr13 88206831 88206926 -32077386 - B1_Mur1 SINE Alu -16 133 35 2 1257 299 305 12 12 chr13 88206956 88207039 -32077273 + B3A SINE B2 86 168 -30 2 1257 4230 142 60 62 chr13 88208422 88209330 -32074982 - RMER17A2 LTR ERVK 0 906 1 2 1257 787 327 66 11 chr13 88209390 88209829 -32074483 - L1M2 LINE L1 -514 5786 5324 2 1257 2000 125 23 7 chr13 88209813 88210120 -32074192 - Lx2 LINE L1 -365 6632 6321 2 1257 1675 142 81 31 chr13 88210123 88210444 -32073868 + Lx2 LINE L1 6634 6970 -27 2 1257 232 300 0 29 chr13 88210485 88210588 -32073724 - L1_Mur1 LINE L1 -602 5284 5185 2 1257 485 318 22 18 chr13 88210603 88210827 -32073485 + Lx8 LINE L1 7246 7470 -3 2 1258 1028 98 0 0 chr13 88211514 88211657 -32072655 + B1_Mus1 SINE Alu 2 144 -4 2 1258 649 23 0 22 chr13 88211657 88211746 -32072566 + (CAAAA)n Simple_repeat Simple_repeat 4 90 0 2 1258 1311 26 0 0 chr13 88211782 88211937 -32072375 + (CA)n Simple_repeat Simple_repeat 2 156 0 2 1258 3897 200 108 1 chr13 88212362 88213177 -32071135 + RMER19B LTR ERVK 1 902 0 2 1258 318 50 0 0 chr13 88213222 88213262 -32071050 + (TA)n Simple_repeat Simple_repeat 2 41 0 2 1258 351 0 0 0 chr13 88213262 88213300 -32071012 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1258 369 296 0 0 chr13 88214664 88214779 -32069533 + L1_Mur3 LINE L1 825 939 -6773 2 1258 1912 342 105 52 chr13 88214790 88217211 -32067101 - MuLV-int LTR ERV1 -2359 5247 2698 2 1258 503 243 35 106 chr13 88217245 88217415 -32066897 - RLTR26 LTR ERVK 0 642 485 3 1258 34811 127 30 7 chr13 88217433 88219243 -32065069 - MERVK26-int LTR ERVK -852 6067 4191 3 1258 2893 41 5 62 chr13 88219243 88219630 -32064682 + RLTR10B2 LTR ERVK 1 365 0 3 1258 34811 127 30 7 chr13 88219630 88221025 -32063287 - MERVK26-int LTR ERVK -2729 4190 2794 3 1258 1154 127 0 23 chr13 88221025 88221243 -32063069 - L1Md_F2 LINE L1 0 6582 6370 3 1258 34811 129 30 6 chr13 88221243 88223858 -32060454 - MERVK26-int LTR ERVK -4126 2793 90 3 1258 304 301 49 63 chr13 88223858 88224000 -32060312 - RLTR26 LTR ERVK -140 502 363 3 1258 251 328 17 17 chr13 88224001 88224119 -32060193 - MuLV-int LTR ERV1 -4868 2688 2571 2 1258 433 358 53 35 chr13 88224250 88224378 -32059934 + MTE2b LTR MaLR 56 177 -202 3 1258 1184 61 0 0 chr13 88224378 88224525 -32059787 + B1_Mus2 SINE Alu 1 147 0 3 1258 433 358 53 35 chr13 88224525 88224714 -32059598 + MTE2b LTR MaLR 178 379 0 3 1258 614 192 0 7 chr13 88224878 88225025 -32059287 + (TA)n Simple_repeat Simple_repeat 2 147 0 3 1258 1303 274 27 9 chr13 88225419 88225794 -32058518 - MTD LTR MaLR 0 421 13 3 1258 26 50 0 0 chr13 88226891 88226931 -32057381 + AT_rich Low_complexity Low_complexity 1 40 0 3 1258 229 0 26 53 chr13 88227817 88227855 -32056457 + (TTTTG)n Simple_repeat Simple_repeat 4 40 0 3 1258 707 217 14 0 chr13 88228761 88228904 -32055408 + B1_Mur4 SINE Alu 5 149 -1 3 1258 189 74 0 0 chr13 88229173 88229200 -32055112 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 3 1258 414 0 0 0 chr13 88229204 88229250 -32055062 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1258 364 51 34 0 chr13 88229251 88229310 -32055002 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 3 1258 486 0 0 0 chr13 88229838 88229892 -32054420 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 3 1258 21 0 0 0 chr13 88230673 88230694 -32053618 + AT_rich Low_complexity Low_complexity 1 21 0 3 1258 603 92 0 0 chr13 88230711 88230798 -32053514 + (CTA)n Simple_repeat Simple_repeat 1 87 0 3 1258 8781 133 14 6 chr13 88230805 88232320 -32051992 - Lx3B LINE L1 -3 6970 5451 3 1258 10706 57 2 1 chr13 88232321 88234372 -32049940 - L1Md_F2 LINE L1 -1 6581 4527 3 1258 7830 63 0 0 chr13 88234370 88235383 -32048929 + L1Md_F2 LINE L1 3499 4511 -1372 3 1258 1471 121 44 29 chr13 88235380 88235653 -32048659 - Lx3B LINE L1 -423 5463 5187 3 1258 366 229 0 0 chr13 88237687 88237890 -32046422 + (TA)n Simple_repeat Simple_repeat 1 203 0 3 1258 835 129 0 75 chr13 88238745 88238904 -32045408 - B1_Mus1 SINE Alu -1 147 1 3 1258 388 243 26 46 chr13 88239116 88239267 -32045045 - L1M3 LINE L1 -717 5451 5304 3 1258 346 299 55 0 chr13 88239257 88239384 -32044928 + L1MA4 LINE L1 5795 5928 -372 3 1258 8434 27 0 1 chr13 88239701 88240769 -32043543 - L1Md_T LINE L1 -2 6580 5514 3 1258 638 286 35 9 chr13 88241243 88241472 -32042840 + Lx9 LINE L1 7283 7517 -127 3 1258 459 125 0 0 chr13 88241488 88241560 -32042752 + (TA)n Simple_repeat Simple_repeat 1 72 0 3 1258 206 207 0 17 chr13 88241616 88241675 -32042637 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 1258 23 0 0 0 chr13 88241756 88241779 -32042533 + AT_rich Low_complexity Low_complexity 1 23 0 3 1258 24890 161 18 6 chr13 88241832 88248026 -32036286 + L1_Mus3 LINE L1 366 6632 -6 3 1258 673 157 17 9 chr13 88250575 88250691 -32033621 + PB1D9 SINE Alu 3 119 -1 3 1258 288 70 0 0 chr13 88250694 88250737 -32033575 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1258 225 0 0 0 chr13 88250825 88250850 -32033462 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1258 408 275 92 24 chr13 88250856 88251020 -32033292 + B3A SINE B2 2 176 -22 3 1258 1456 194 157 19 chr13 88251121 88251484 -32032828 - RMER20B LTR ERVK 0 627 215 3 1258 425 50 17 0 chr13 88251487 88251547 -32032765 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1258 320 224 0 10 chr13 88252070 88252169 -32032143 + (TA)n Simple_repeat Simple_repeat 2 99 0 3 1258 1029 369 107 25 chr13 88252198 88253085 -32031227 + Lx8 LINE L1 6269 7239 -234 3 1258 242 0 0 57 chr13 88253085 88253120 -32031192 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 3 1258 1029 369 107 25 chr13 88253120 88253201 -32031111 + Lx8 LINE L1 7240 7317 -156 3 1258 2006 273 68 11 chr13 88253236 88253996 -32030316 - Lx9 LINE L1 -134 7510 6707 3 1258 270 0 0 0 chr13 88254186 88254216 -32030096 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1258 1199 48 0 0 chr13 88254226 88254373 -32029939 - B1_Mus2 SINE Alu 0 147 1 3 1258 1775 123 0 21 chr13 88254376 88254658 -32029654 - L1_Mus4 LINE L1 -5 6631 6356 3 1258 4395 130 31 0 chr13 88254658 88255343 -32028969 + L1_Mus4 LINE L1 5674 6379 -257 3 1258 329 308 113 0 chr13 88255419 88255552 -32028760 - ID_B1 SINE B4 -2 222 75 3 1258 2778 92 25 15 chr13 88255604 88256000 -32028312 + MTB LTR MaLR 1 400 0 3 1258 835 201 44 6 chr13 88256067 88256247 -32028065 - B2_Mm2 SINE B2 -8 187 1 3 1258 27 73 0 0 chr13 88256398 88256453 -32027859 + AT_rich Low_complexity Low_complexity 1 55 0 3 1258 253 227 54 43 chr13 88256453 88256545 -32027767 - Lx7 LINE L1 0 7696 7604 3 1258 44 63 0 0 chr13 88256571 88256650 -32027662 + AT_rich Low_complexity Low_complexity 1 79 0 3 1258 819 34 34 0 chr13 88256718 88256836 -32027476 + L1Md_T LINE L1 6461 6582 0 3 1258 565 300 103 18 chr13 88256870 88257152 -32027160 - Lx7 LINE L1 -358 7338 7033 3 1258 801 309 68 27 chr13 88257168 88257657 -32026655 + Lx7 LINE L1 5609 6117 -1579 3 1258 6631 90 36 4 chr13 88257652 88258593 -32025719 + L1_Mus2 LINE L1 5596 6566 0 3 1258 388 191 33 22 chr13 88258615 88258706 -32025606 + Lx7 LINE L1 6140 6231 -1465 3 1258 22 35 0 0 chr13 88258777 88258806 -32025506 + AT_rich Low_complexity Low_complexity 1 29 0 3 1258 22 0 0 0 chr13 88258899 88258921 -32025391 + AT_rich Low_complexity Low_complexity 1 22 0 3 1258 32 75 0 0 chr13 88258951 88259018 -32025294 + AT_rich Low_complexity Low_complexity 1 67 0 3 1258 24844 112 9 18 chr13 88259426 88264422 -32019890 + Lx3_Mus LINE L1 2047 6992 -17 3 1258 1540 157 52 4 chr13 88264445 88264713 -32019599 - L1_Mur2 LINE L1 -100 5777 5497 3 1258 1195 300 56 50 chr13 88264745 88265195 -32019117 - Lx7 LINE L1 -1292 6404 5957 3 1258 1697 203 33 17 chr13 88265195 88265556 -32018756 - ORR1B2 LTR MaLR 0 367 1 3 1258 1195 300 56 50 chr13 88265556 88265751 -32018561 - Lx7 LINE L1 -1740 5956 5755 3 1258 604 368 29 25 chr13 88265890 88266169 -32018143 - B4A SINE B4 -12 280 1 3 1258 1315 102 0 21 chr13 88266445 88266635 -32017677 + B2_Mm2 SINE B2 1 186 -9 3 1258 27 29 0 0 chr13 88267310 88267344 -32016968 + AT_rich Low_complexity Low_complexity 1 34 0 3 1258 1863 217 26 55 chr13 88268150 88268642 -32015670 + RLTR40 LTR ERVK 7 484 -333 3 1258 2736 280 65 57 chr13 88268642 88269003 -32015309 + Lx6 LINE L1 6391 6733 -727 3 1258 504 48 0 0 chr13 88269003 88269066 -32015246 + (TG)n Simple_repeat Simple_repeat 2 64 0 3 1258 2736 280 65 57 chr13 88269066 88269285 -32015027 + Lx6 LINE L1 6734 6975 -485 3 1258 4549 134 14 7 chr13 88269285 88270006 -32014306 + Lx3A LINE L1 6253 6978 -3 3 1258 2736 280 65 57 chr13 88270006 88270483 -32013829 + Lx6 LINE L1 6976 7457 -3 3 1258 469 296 87 19 chr13 88270497 88270704 -32013608 + RLTR40 LTR ERVK 502 722 -95 3 1258 884 264 153 44 chr13 88270709 88271035 -32013277 + RLTR40 LTR ERVK 386 750 -67 3 1258 183 42 0 0 chr13 88271035 88271059 -32013253 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 3 1258 884 264 153 44 chr13 88271059 88271117 -32013195 + RLTR40 LTR ERVK 751 811 -6 3 1258 24 77 0 0 chr13 88271361 88271413 -32012899 + AT_rich Low_complexity Low_complexity 1 52 0 3 1258 2223 216 43 8 chr13 88271457 88272044 -32012268 - L1_Mur2 LINE L1 -2980 2897 2291 3 1258 2036 211 142 30 chr13 88272044 88272799 -32011513 + RMER6C LTR ERVK 1 720 0 3 1258 3848 216 24 56 chr13 88272799 88274049 -32010263 - L1_Mur2 LINE L1 -3581 2296 1087 3 1258 5312 202 73 21 chr13 88274051 88275218 -32009094 + L1_Mur2 LINE L1 2247 3470 -2407 3 1258 189 0 0 0 chr13 88275218 88275239 -32009073 + (CAA)n Simple_repeat Simple_repeat 1 21 0 3 1258 5312 202 73 21 chr13 88275239 88275473 -32008839 + L1_Mur2 LINE L1 3471 3720 -2157 3 1258 603 252 8 8 chr13 88276146 88276278 -32008034 + Lx8 LINE L1 6891 7022 -451 3 1258 321 140 0 0 chr13 88276393 88276450 -32007862 + (CAT)n Simple_repeat Simple_repeat 3 59 0 3 1258 3609 139 128 16 chr13 88276541 88277327 -32006985 - RLTR13D6 LTR ERVK 0 902 1 3 1258 1385 211 130 21 chr13 88277552 88277930 -32006382 + MTC LTR MaLR 1 419 -2 3 1258 243 296 14 14 chr13 88277967 88278039 -32006273 + ID4 SINE ID 10 81 -2 3 1258 484 194 23 30 chr13 88278333 88278466 -32005846 - Lx6 LINE L1 0 7460 7329 3 1258 1259 95 6 6 chr13 88279048 88279228 -32005084 + B2_Mm1t SINE B2 2 181 -12 3 1258 24 32 0 0 chr13 88279781 88279812 -32004500 + AT_rich Low_complexity Low_complexity 1 31 0 3 1258 1026 83 7 14 chr13 88280701 88280848 -32003464 + B1_Mus2 SINE Alu 2 147 0 3 1258 189 0 0 0 chr13 88280848 88280869 -32003443 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 3 1258 2964 134 35 2 chr13 88280952 88281437 -32002875 - Lx2 LINE L1 0 6997 6497 3 1258 345 47 0 0 chr13 88282202 88282245 -32002067 + (TA)n Simple_repeat Simple_repeat 2 44 0 3 1258 240 328 0 0 chr13 88282634 88282692 -32001620 + ID4_ SINE ID 2 59 -24 3 1258 1183 94 0 11 chr13 88282738 88282920 -32001392 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1258 3857 59 4 61 chr13 88282925 88283481 -32000831 - L1_Mus2 LINE L1 -2 6564 6041 3 1258 25 0 0 0 chr13 88284611 88284636 -31999676 + AT_rich Low_complexity Low_complexity 1 25 0 3 1258 21 0 0 0 chr13 88285327 88285348 -31998964 + AT_rich Low_complexity Low_complexity 1 21 0 3 1258 21 0 0 0 chr13 88286034 88286055 -31998257 + AT_rich Low_complexity Low_complexity 1 21 0 3 1258 246 352 33 0 chr13 88286918 88287040 -31997272 - RMER15 LTR ERVL -41 534 409 3 1258 22 88 0 0 chr13 88287234 88287291 -31997021 + AT_rich Low_complexity Low_complexity 1 57 0 3 1258 204 97 0 0 chr13 88287364 88287395 -31996917 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1258 488 68 14 0 chr13 88287398 88287471 -31996841 + (GGGAGA)n Simple_repeat Simple_repeat 6 79 0 3 1258 524 267 30 8 chr13 88287532 88287664 -31996648 - Lx9 LINE L1 -1094 6550 6416 3 1258 21 71 0 0 chr13 88287670 88287712 -31996600 + AT_rich Low_complexity Low_complexity 1 42 0 3 1258 23 33 0 0 chr13 88287731 88287761 -31996551 + AT_rich Low_complexity Low_complexity 1 30 0 3 1258 669 165 0 0 chr13 88287804 88287925 -31996387 + GA-rich Low_complexity Low_complexity 3 123 0 3 1258 240 35 0 0 chr13 88287932 88287961 -31996351 + (GGA)n Simple_repeat Simple_repeat 1 29 0 3 1258 2537 238 84 125 chr13 88288376 88289312 -31995000 + RMER19B LTR ERVK 1 898 -4 3 1258 1262 93 33 5 chr13 88289741 88289925 -31994387 + B2_Mm2 SINE B2 2 190 -5 3 1258 24 32 0 0 chr13 88289929 88289960 -31994352 + AT_rich Low_complexity Low_complexity 1 31 0 3 1258 852 177 6 0 chr13 88290029 88290187 -31994125 + L1_Mur3 LINE L1 4179 4337 -1543 3 1258 1073 82 7 0 chr13 88290192 88290339 -31993973 + B1_Mus1 SINE Alu 1 148 0 4 1258 264 219 16 8 chr13 88290407 88290531 -31993781 + (TA)n Simple_repeat Simple_repeat 2 126 0 4 1258 675 159 91 0 chr13 88290534 88290666 -31993646 + L1_Mur3 LINE L1 4387 4530 -1350 3 1258 894 145 45 26 chr13 88290682 88290838 -31993474 - Lx4B LINE L1 -513 6545 6387 4 1258 404 267 19 28 chr13 88290836 88290944 -31993368 + Lx7 LINE L1 7257 7363 -333 4 1258 33 25 0 0 chr13 88290944 88290984 -31993328 + AT_rich Low_complexity Low_complexity 1 40 0 4 1258 1088 302 151 9 chr13 88290984 88291403 -31992909 + Lx9 LINE L1 7022 7458 -186 4 1258 366 23 0 0 chr13 88291403 88291446 -31992866 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1258 1088 302 151 9 chr13 88291446 88291571 -31992741 + Lx9 LINE L1 7459 7643 -1 4 1258 214 309 162 0 chr13 88291714 88291782 -31992530 + ID4_ SINE ID 4 82 -1 4 1258 258 56 0 0 chr13 88291803 88291839 -31992473 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1258 542 28 0 27 chr13 88292940 88293013 -31991299 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 4 1258 486 284 85 15 chr13 88296986 88297186 -31987126 + B3 SINE B2 1 214 -2 4 1258 299 181 14 0 chr13 88297186 88297258 -31987054 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 1258 425 329 39 26 chr13 88297446 88297602 -31986710 + RLTR16 LTR ERVK 1 158 -347 4 1258 298 82 0 62 chr13 88297602 88297667 -31986645 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 4 1258 286 304 92 54 chr13 88297715 88297899 -31986413 + RLTR17 LTR ERVK 242 432 -260 4 1258 180 0 0 0 chr13 88298264 88298284 -31986028 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1258 447 336 113 20 chr13 88298330 88298676 -31985636 + MTEa LTR MaLR 1 378 -1 4 1258 906 243 112 86 chr13 88299047 88299500 -31984812 - RLTR22_Mus LTR ERVK -42 1766 1350 4 1258 2421 39 72 0 chr13 88299886 88300191 -31984121 - IAPLTR2b LTR ERVK 0 327 1 4 1258 11341 62 10 8 chr13 88300193 88301653 -31982659 - IAPEz-int LTR ERVK -2 6479 5017 4 1258 2256 39 25 0 chr13 88301653 88301939 -31982373 - IAPLTR2b LTR ERVK -34 293 1 4 1258 6426 158 29 75 chr13 88301941 88303074 -31981238 + L1VL4 LINE L1 241 1327 -2232 4 1258 225 0 0 0 chr13 88303074 88303099 -31981213 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 4 1258 6426 150 38 65 chr13 88303099 88304062 -31980250 + L1VL4 LINE L1 1328 2242 -1317 4 1258 3759 155 21 6 chr13 88304063 88304895 -31979417 - Lx2 LINE L1 -783 6214 5372 4 1258 5726 45 1 3 chr13 88305153 88306255 -31978057 + L1Md_F2 LINE L1 5207 6303 -279 4 1258 2114 73 0 4 chr13 88306223 88306499 -31977813 + L1Md_F2 LINE L1 5312 5586 -297 4 1258 7192 76 2 45 chr13 88306500 88307538 -31976774 + L1Md_F2 LINE L1 5588 6580 -2 4 1258 366 210 129 18 chr13 88307555 88307725 -31976587 - MurERV4_19-int LTR ERVK -99 5681 5493 4 1258 227 325 57 86 chr13 88307799 88307974 -31976338 - RMER4A LTR ERVK -42 424 255 4 1258 2106 193 33 9 chr13 88307974 88308403 -31975909 - MurERV4_19-int LTR ERVK -430 5350 4912 4 1258 1214 304 41 64 chr13 88308403 88308916 -31975396 + RLTR20B3 LTR ERVK 17 517 -60 4 1258 1550 176 116 10 chr13 88308945 88309542 -31974770 - MurERV4_19-int LTR ERVK -851 4929 4270 4 1258 6781 226 17 13 chr13 88309512 88310950 -31973362 - MurERV4_19-int LTR ERVK -4336 1444 1 4 1258 1689 249 14 6 chr13 88310956 88311336 -31972976 - RMER19C LTR ERVK -237 665 246 4 1258 1447 183 27 0 chr13 88311354 88311616 -31972696 - RMER19C LTR ERVK -342 269 1 4 1258 3639 302 34 70 chr13 88311626 88313237 -31971075 + Lx7 LINE L1 6145 7696 0 4 1258 270 316 72 14 chr13 88313299 88313508 -31970804 + L1MA5 LINE L1 5721 5941 -359 4 1258 343 280 43 63 chr13 88313812 88314064 -31970248 - L1M2 LINE L1 -792 5505 5263 4 1258 7530 181 12 11 chr13 88314353 88316507 -31967805 + Lx2 LINE L1 4831 6996 -1 4 1258 683 231 36 41 chr13 88317013 88317207 -31967105 + URR1A DNA MER1_type 33 225 -1 4 1258 500 320 40 80 chr13 88317709 88317933 -31966379 + B3 SINE B2 2 216 0 4 1258 4498 49 0 2 chr13 88318098 88318652 -31965660 + L1Md_F2 LINE L1 6017 6569 -13 4 1258 33 43 0 41 chr13 88318652 88318725 -31965587 + AT_rich Low_complexity Low_complexity 1 70 0 4 1258 194 62 31 0 chr13 88318763 88318795 -31965517 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1258 873 89 0 0 chr13 88320832 88320956 -31963356 + (TA)n Simple_repeat Simple_repeat 2 125 0 4 1258 451 189 24 16 chr13 88320958 88321082 -31963230 + Lx9 LINE L1 7519 7643 -1 4 1258 279 54 0 0 chr13 88321411 88321448 -31962864 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1258 4391 12 0 0 chr13 88322242 88322735 -31961577 - MT2_Mm LTR ERVL 0 493 1 4 1258 7147 76 12 1 chr13 88322828 88323870 -31960442 + L1Md_F2 LINE L1 5546 6582 0 4 1258 360 0 0 0 chr13 88324175 88324215 -31960097 + (TG)n Simple_repeat Simple_repeat 1 40 0 4 1258 933 306 34 90 chr13 88325061 88325296 -31959016 - RMER10B LTR ERVL 0 398 180 4 1258 1295 67 11 0 chr13 88325296 88325474 -31958838 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 4 1258 933 306 34 90 chr13 88325474 88325651 -31958661 - RMER10B LTR ERVL -219 179 9 4 1258 423 0 0 0 chr13 88325937 88325984 -31958328 + (TA)n Simple_repeat Simple_repeat 2 48 0 4 1258 381 22 0 0 chr13 88326603 88326649 -31957663 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1258 398 318 0 0 chr13 88327480 88327587 -31956725 - Lx8 LINE L1 -567 6906 6800 4 1258 978 276 85 44 chr13 88327751 88328092 -31956220 + Lx6 LINE L1 7098 7452 -8 4 1258 1099 166 51 0 chr13 88328103 88328338 -31955974 - Lx3C LINE L1 -732 6244 5998 4 1258 348 236 140 0 chr13 88328345 88328523 -31955789 - Lx2B LINE L1 -890 6110 5908 4 1258 3016 208 52 27 chr13 88328526 88329233 -31955079 + Lx3C LINE L1 6248 6972 -4 4 1258 1055 201 13 9 chr13 88329259 88329490 -31954822 - Lx LINE L1 0 6654 6423 4 1258 2067 107 12 45 chr13 88329490 88329823 -31954489 + Lx LINE L1 6074 6395 -259 4 1258 397 363 73 10 chr13 88329841 88330033 -31954279 - Lx8 LINE L1 -795 6678 6475 4 1258 21 57 0 0 chr13 88331423 88331458 -31952854 + AT_rich Low_complexity Low_complexity 1 35 0 4 1258 42 65 0 0 chr13 88332399 88332476 -31951836 + AT_rich Low_complexity Low_complexity 1 77 0 4 1258 242 29 29 0 chr13 88332638 88332673 -31951639 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 4 1258 931 47 38 15 chr13 88332673 88332804 -31951508 - B1_Mus2 SINE Alu -13 134 1 4 1258 264 397 43 0 chr13 88333144 88333260 -31951052 - RSINE1 SINE B4 -1 164 44 4 1258 20995 161 103 69 chr13 88333683 88334446 -31949866 - L1_Mus3 LINE L1 -1 6637 5809 4 1258 1078 97 0 7 chr13 88334446 88334592 -31949720 + B1_Mus2 SINE Alu 1 145 -2 4 1258 20995 183 44 16 chr13 88334592 88339252 -31945060 - L1_Mus3 LINE L1 -75 5808 993 4 1258 443 301 198 32 chr13 88339253 88339568 -31944744 + RLTR9A LTR ERVK 1 418 -2 4 1258 375 23 0 0 chr13 88339991 88340035 -31944277 + (GA)n Simple_repeat Simple_repeat 1 44 0 4 1258 5478 168 80 27 chr13 88340078 88341244 -31943068 + RMER16-int LTR ERVK 317 1543 -3863 4 1258 683 235 4 114 chr13 88341411 88341780 -31942532 + RMER16-int LTR ERVK 2363 2580 -4826 4 1258 252 0 0 0 chr13 88341920 88341948 -31942364 + (T)n Simple_repeat Simple_repeat 1 28 0 4 157 3127 35 0 3 chr13 88342457 88342831 -31941481 + L1Md_F3 LINE L1 6190 6562 -22 4 1259 405 0 0 0 chr13 88342834 88342879 -31941433 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1259 3088 95 65 47 chr13 88342990 88343499 -31940813 - L1_Mus2 LINE L1 -3 6563 6046 4 1259 3515 140 43 8 chr13 88343586 88344206 -31940106 + RMER16-int LTR ERVK 1566 2207 -3199 4 1259 7182 135 16 31 chr13 88344218 88345489 -31938823 + RMER16-int LTR ERVK 2298 3548 -1858 4 1259 3285 108 6 20 chr13 88345487 88345978 -31938334 + RMER16-int LTR ERVK 3852 4335 -1071 4 1259 281 151 38 0 chr13 88346070 88346123 -31938189 - L1VL2 LINE L1 -5827 508 454 4 1259 2625 195 14 12 chr13 88346130 88346922 -31937390 - Lx2B LINE L1 -850 6150 5364 4 1259 1176 75 0 0 chr13 88346922 88347069 -31937243 + B1_Mm SINE Alu 1 147 0 4 1259 239 41 60 20 chr13 88347070 88347120 -31937192 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 4 1259 437 200 48 0 chr13 88347121 88347226 -31937086 - Lx2B LINE L1 -507 5370 5261 4 1259 2568 271 25 1 chr13 88347219 88347866 -31936446 - Lx3C LINE L1 -2 6974 6313 4 1259 515 216 185 0 chr13 88347865 88348027 -31936285 - Lx2B LINE L1 -865 6135 5944 4 1259 4832 200 49 10 chr13 88348022 88348879 -31935433 + L1_Mur1 LINE L1 2595 3479 -2407 4 1259 324 0 0 0 chr13 88348879 88348915 -31935397 + (CAA)n Simple_repeat Simple_repeat 1 36 0 4 1259 4832 200 49 10 chr13 88348915 88349245 -31935067 + L1_Mur1 LINE L1 3480 3827 -2059 4 1259 238 320 0 25 chr13 88349243 88349323 -31934989 - Lx3C LINE L1 -535 6119 6042 4 1259 1530 206 3 6 chr13 88349291 88349609 -31934703 + L1_Mur1 LINE L1 4693 5009 -877 4 1259 1827 186 84 5 chr13 88349600 88350004 -31934308 - L1_Mur2 LINE L1 -578 5299 4864 4 1259 1181 61 0 0 chr13 88351361 88351508 -31932804 + B1_Mus2 SINE Alu 1 147 0 4 1259 426 136 0 0 chr13 88351508 88351589 -31932723 + (A)n Simple_repeat Simple_repeat 1 81 0 4 1259 2407 209 98 20 chr13 88351889 88352207 -31932105 + RMER6C LTR ERVK 1 322 -368 4 1259 270 0 0 0 chr13 88352207 88352237 -31932075 + (GA)n Simple_repeat Simple_repeat 1 30 0 4 1259 2407 209 98 20 chr13 88352237 88352558 -31931754 + RMER6C LTR ERVK 323 690 0 4 1259 309 374 60 66 chr13 88352689 88352855 -31931457 - B3 SINE B2 -50 166 2 4 1259 230 390 32 8 chr13 88352912 88353036 -31931276 - B1F1 SINE Alu -8 141 15 4 1259 986 330 122 42 chr13 88354011 88354793 -31929519 + Tigger7 DNA MER2_type 28 871 -1620 4 1259 315 71 0 0 chr13 88354832 88354874 -31929438 + (CA)n Simple_repeat Simple_repeat 1 42 0 4 1259 665 82 0 10 chr13 88354874 88354971 -31929341 + (GAAAA)n Simple_repeat Simple_repeat 2 98 0 4 1259 710 154 0 8 chr13 88354971 88355102 -31929210 + A-rich Low_complexity Low_complexity 1 130 0 4 1259 284 348 32 73 chr13 88355205 88355453 -31928859 + Tigger7 DNA MER2_type 1058 1295 -1196 4 1259 461 250 89 0 chr13 88355603 88355727 -31928585 - RMER6D LTR ERVK 0 720 586 4 1259 378 358 93 16 chr13 88355709 88356021 -31928291 + Tigger7 DNA MER2_type 1463 1798 -693 4 1259 370 354 90 62 chr13 88356053 88356305 -31928007 + L1M2 LINE L1 4622 4866 -1277 4 1259 264 30 0 0 chr13 88356305 88356338 -31927974 + (CAA)n Simple_repeat Simple_repeat 2 34 0 4 1259 370 354 90 62 chr13 88356338 88356453 -31927859 + L1M2 LINE L1 4867 4998 -1145 4 1259 2528 242 21 13 chr13 88356503 88357211 -31927101 + Lx6 LINE L1 2268 2981 -2899 4 1259 1294 271 13 60 chr13 88357220 88357719 -31926593 - Lx6 LINE L1 -1166 6294 5837 4 1259 1878 210 82 32 chr13 88357739 88358265 -31926047 + Lx6 LINE L1 5049 5600 -280 4 1259 735 248 61 13 chr13 88358255 88358484 -31925828 + Lx6 LINE L1 5709 5948 -1512 4 1259 1267 312 82 9 chr13 88358485 88358934 -31925378 + Lx6 LINE L1 6796 7277 -183 4 1259 374 157 8 34 chr13 88359173 88359292 -31925020 + T-rich Low_complexity Low_complexity 2 117 0 4 1259 556 257 6 17 chr13 88359475 88359649 -31924663 + Lx2B LINE L1 6820 6991 -9 4 1259 1221 230 69 14 chr13 88359649 88359940 -31924372 - RMER12 LTR ERVK -1015 307 1 4 1259 571 344 86 57 chr13 88360022 88360373 -31923939 + ORR1E LTR MaLR 2 374 0 4 1259 298 229 16 0 chr13 88360379 88360440 -31923872 + ORR1E-int LTR MaLR 1003 1064 -516 4 1259 1083 249 128 0 chr13 88360440 88360721 -31923591 - ORR1B2 LTR MaLR 0 367 51 4 1259 656 324 66 30 chr13 88361246 88361697 -31922615 + ORR1E-int LTR MaLR 1195 1576 -4 4 1259 222 91 0 0 chr13 88361845 88361878 -31922434 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1259 1696 244 16 70 chr13 88362081 88362640 -31921672 - RLTR24 LTR ERV1 0 529 1 4 1259 243 0 0 0 chr13 88363430 88363457 -31920855 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1259 1682 42 0 5 chr13 88363748 88363963 -31920349 - L1Md_F3 LINE L1 -2 6582 6369 5 1259 340 341 0 11 chr13 88364473 88364562 -31919750 - B1F SINE Alu -51 98 11 5 1259 2323 107 22 34 chr13 88364681 88365096 -31919216 + RMER17A LTR ERVK 9 418 -333 5 1259 428 50 17 0 chr13 88365111 88365171 -31919141 + RMER17A-int LTR ERVK 1414 1474 -254 5 1259 3365 192 6 6 chr13 88365662 88366348 -31917964 + L1_Mur2 LINE L1 4013 4698 -1179 5 1259 1010 300 120 7 chr13 88366469 88367200 -31917112 - Lx6 LINE L1 -26 7434 6555 5 1259 272 271 41 41 chr13 88368428 88368551 -31915761 + MERVK26-int LTR ERVK 4536 4658 -2261 5 1259 6830 47 6 19 chr13 88369243 88370120 -31914192 - L1Md_F2 LINE L1 -4 6578 5714 5 1259 5618 44 0 0 chr13 88370115 88370796 -31913516 + L1Md_F2 LINE L1 5044 5724 -159 5 1259 361 324 95 79 chr13 88372908 88373404 -31910908 + HAL1 LINE L1 1715 2218 -289 5 1259 275 269 77 0 chr13 88373508 88373586 -31910726 + MER94 DNA AcHobo 46 129 -5 5 1259 2631 191 70 63 chr13 88373958 88374560 -31909752 + RMER19C LTR ERVK 1 606 -5 5 1259 17114 172 51 19 chr13 88374564 88374877 -31909435 + MurERV4_19-int LTR ERVK 1 345 -5435 5 1259 182 37 0 36 chr13 88374877 88374905 -31909407 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5 1259 17114 172 51 19 chr13 88374905 88377187 -31907125 + MurERV4_19-int LTR ERVK 346 2647 -3133 5 1259 7303 41 0 0 chr13 88377187 88378066 -31906246 + L1Md_T LINE L1 5704 6582 0 5 1259 17114 172 51 19 chr13 88378066 88378797 -31905515 + MurERV4_19-int LTR ERVK 2648 3436 -2344 5 1259 3022 109 43 4 chr13 88378797 88379427 -31904885 - Lx LINE L1 -646 6008 5366 5 1259 2630 180 13 0 chr13 88379427 88379950 -31904362 + MurERV4_19-int LTR ERVK 3446 3975 -1805 5 1259 5095 156 35 13 chr13 88379944 88380928 -31903384 + MurERV4_19-int LTR ERVK 4103 5107 -673 5 1259 322 286 58 16 chr13 88380937 88381061 -31903251 + RMER12B LTR ERVK 1341 1572 0 5 1259 412 267 0 0 chr13 88381096 88381197 -31903115 - Lx7 LINE L1 -1703 5993 5893 5 1259 832 234 78 80 chr13 88381605 88382074 -31902238 - RLTR20C LTR ERVK 0 578 1 5 1259 17065 193 43 26 chr13 88382074 88386313 -31897999 - Lx4A LINE L1 -480 6578 2059 5 1259 384 40 0 0 chr13 88386313 88386363 -31897949 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1259 17065 195 42 18 chr13 88386363 88387721 -31896591 - Lx4A LINE L1 -3819 2058 677 5 1259 21 0 0 0 chr13 88387797 88387818 -31896494 + AT_rich Low_complexity Low_complexity 1 21 0 5 1259 790 324 88 53 chr13 88388831 88389170 -31895142 + ORR1D2 LTR MaLR 20 370 0 5 1259 6999 131 5 16 chr13 88390479 88391626 -31892686 + Lx LINE L1 5517 6647 -7 5 1259 22 35 0 0 chr13 88391756 88391785 -31892527 + AT_rich Low_complexity Low_complexity 1 29 0 5 1259 393 39 0 0 chr13 88391789 88391840 -31892472 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1259 218 282 57 34 chr13 88391873 88391961 -31892351 - B2_Mm2 SINE B2 -103 92 3 5 1259 832 101 0 52 chr13 88392793 88392929 -31891383 - L1_Mus1 LINE L1 0 6567 6439 5 1259 21 82 0 0 chr13 88393011 88393060 -31891252 + AT_rich Low_complexity Low_complexity 1 49 0 5 1259 28 48 0 0 chr13 88393140 88393182 -31891130 + AT_rich Low_complexity Low_complexity 1 42 0 5 1259 216 135 0 0 chr13 88393599 88393636 -31890676 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1259 579 29 0 0 chr13 88394192 88394261 -31890051 + (TC)n Simple_repeat Simple_repeat 2 70 0 5 1259 517 330 31 61 chr13 88394380 88394811 -31889501 + Lx8 LINE L1 6519 7033 -611 5 1259 451 398 15 11 chr13 88394945 88395217 -31889095 + Lx8 LINE L1 7080 7352 -121 5 1259 24 0 0 0 chr13 88395329 88395353 -31888959 + AT_rich Low_complexity Low_complexity 1 24 0 5 1259 335 93 18 36 chr13 88395449 88395505 -31888807 + RLTR9B LTR ERVK 1 55 -313 5 1259 569 262 15 76 chr13 88395506 88395704 -31888608 + RLTR9B LTR ERVK 250 435 -2 5 1259 907 296 34 23 chr13 88396535 88396887 -31887425 - Lx8 LINE L1 -544 6929 6574 5 1259 23 33 0 0 chr13 88397052 88397082 -31887230 + AT_rich Low_complexity Low_complexity 1 30 0 5 1259 227 274 0 0 chr13 88397326 88397377 -31886935 + BC1_Mm scRNA scRNA 11 61 -91 5 1259 227 268 89 0 chr13 88397337 88397393 -31886919 + ID SINE ID 23 83 -141 5 1259 243 369 149 11 chr13 88397908 88398270 -31886042 - Lx7 LINE L1 -610 7086 6675 5 1259 28 29 0 0 chr13 88398690 88398725 -31885587 + AT_rich Low_complexity Low_complexity 1 35 0 5 1259 471 299 81 42 chr13 88398730 88399111 -31885201 + L1MA6 LINE L1 5580 5975 -325 5 1259 423 0 0 0 chr13 88399434 88399481 -31884831 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1259 183 100 0 0 chr13 88399650 88399680 -31884632 + (TTG)n Simple_repeat Simple_repeat 2 31 0 5 1259 513 0 0 0 chr13 88399728 88399785 -31884527 + (TAGA)n Simple_repeat Simple_repeat 1 57 0 5 1259 22 80 0 0 chr13 88399844 88399894 -31884418 + AT_rich Low_complexity Low_complexity 1 50 0 5 1259 340 105 13 13 chr13 88399928 88400005 -31884307 + (TTTG)n Simple_repeat Simple_repeat 3 79 0 5 1259 10741 214 109 24 chr13 88400046 88402498 -31881814 + L1_Mur1 LINE L1 8 2793 -3093 5 1259 231 61 0 0 chr13 88402498 88402531 -31881781 + (CAA)n Simple_repeat Simple_repeat 1 33 0 5 1259 10741 151 75 22 chr13 88402531 88404131 -31880181 + L1_Mur1 LINE L1 2794 4489 -1397 5 1259 2230 228 48 17 chr13 88404131 88404672 -31879640 + RLTR31_Mm LTR ERVK 1 558 -3 5 1259 4116 134 40 6 chr13 88404674 88405392 -31878920 + L1_Mur1 LINE L1 4485 5227 -659 5 1259 303 96 0 0 chr13 88405392 88405444 -31878868 + (GA)n Simple_repeat Simple_repeat 2 53 0 5 1259 359 246 138 63 chr13 88405444 88405683 -31878629 + RLTR15 LTR ERVK 72 328 -31 5 1259 4388 88 20 8 chr13 88406988 88407622 -31876690 + L1_Mus1 LINE L1 5926 6567 0 5 1259 23 0 0 0 chr13 88407691 88407714 -31876598 + AT_rich Low_complexity Low_complexity 1 23 0 5 1259 23 0 0 0 chr13 88408244 88408267 -31876045 + AT_rich Low_complexity Low_complexity 1 23 0 5 1259 1368 352 38 13 chr13 88408498 88409109 -31875203 - Lx8 LINE L1 -657 6816 6191 5 1259 1189 41 7 0 chr13 88409185 88409331 -31874981 - B1_Mm SINE Alu 0 147 1 5 1259 42 86 0 0 chr13 88409513 88409618 -31874694 + AT_rich Low_complexity Low_complexity 1 105 0 5 1259 4223 240 45 44 chr13 88410078 88411294 -31873018 + L1_Mur2 LINE L1 889 2047 -3830 5 1259 459 35 0 0 chr13 88411294 88411351 -31872961 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1259 4223 237 49 24 chr13 88411351 88411819 -31872493 + L1_Mur2 LINE L1 2048 2513 -3364 5 1259 4069 166 56 3 chr13 88411811 88412880 -31871432 - Lx LINE L1 -615 6039 4360 5 1259 9671 199 9 11 chr13 88412879 88413604 -31870708 - Lx LINE L1 -1810 4073 3342 5 1259 3011 26 0 0 chr13 88413604 88413950 -31870362 - ORR1A0 LTR MaLR 0 346 1 5 1259 13693 59 6 2 chr13 88413950 88415734 -31868578 - ORR1A0-int LTR MaLR 0 1792 1 5 1259 2769 20 0 115 chr13 88415734 88416125 -31868187 - ORR1A0 LTR MaLR 0 346 1 5 1259 9671 199 9 11 chr13 88416125 88417486 -31866826 - Lx LINE L1 -2542 3341 1992 5 1259 3263 146 35 41 chr13 88417499 88418106 -31866206 + Lx LINE L1 6045 6647 -7 5 1259 189 0 0 0 chr13 88418119 88418140 -31866172 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1259 335 264 117 9 chr13 88418178 88418289 -31866023 + ID_B1 SINE B4 99 221 -3 5 1259 1170 258 5 2 chr13 88418816 88419147 -31865165 + L1_Mur2 LINE L1 2480 2812 -1102 5 1259 8303 130 30 5 chr13 88419160 88420448 -31863864 + Lx3A LINE L1 5660 6978 -3 5 1259 3928 230 75 25 chr13 88420478 88421753 -31862559 + L1_Mur2 LINE L1 2801 4139 -1741 5 1259 529 238 151 27 chr13 88421754 88421940 -31862372 - RLTR20B2 LTR ERVK -244 316 108 5 1259 1404 306 58 44 chr13 88421993 88423253 -31861059 + Lx5 LINE L1 5879 7047 -3 5 1259 690 55 0 0 chr13 88424162 88424253 -31860059 + (TC)n Simple_repeat Simple_repeat 2 92 0 5 1259 408 97 0 0 chr13 88424253 88424314 -31859998 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 1259 233 408 0 0 chr13 88424875 88424951 -31859361 + ID2 SINE ID 4 79 -4 5 1259 364 161 0 24 chr13 88424968 88425051 -31859261 + (TA)n Simple_repeat Simple_repeat 2 82 0 5 1259 25 31 0 0 chr13 88425266 88425298 -31859014 + AT_rich Low_complexity Low_complexity 1 32 0 5 1259 1670 275 50 12 chr13 88425811 88426434 -31857878 - Lx9 LINE L1 -2 7642 6884 5 1259 633 172 16 0 chr13 88426432 88426554 -31857758 + L1_Rod LINE L1 4824 4947 -900 5 1259 591 252 14 7 chr13 88426562 88426710 -31857602 + ORR1B2 LTR MaLR 9 157 -210 5 1259 275 275 29 2 chr13 88426712 88426803 -31857509 + ORR1B2 LTR MaLR 289 394 0 5 1259 566 295 110 25 chr13 88426803 88427241 -31857071 + L1_Rod LINE L1 4943 5417 -430 5 1259 3709 184 51 32 chr13 88427249 88427997 -31856315 + L1VL2 LINE L1 63 824 -5511 5 1259 5821 129 12 6 chr13 88427995 88428890 -31855422 - Lx3_Mus LINE L1 -114 6895 5995 5 1259 406 184 59 30 chr13 88428892 88428993 -31855319 + Lx3_Mus LINE L1 6898 7001 -8 5 1259 394 122 47 47 chr13 88428982 88429068 -31855244 + MusHAL1 LINE L1 535 620 -2734 5 1259 711 182 49 0 chr13 88429052 88429195 -31855117 + MusHAL1 LINE L1 1572 1721 -1632 5 1259 7962 170 13 33 chr13 88429198 88431078 -31853234 + Lx LINE L1 4346 6194 -460 5 1259 1200 48 0 0 chr13 88431078 88431225 -31853087 + B1_Mm SINE Alu 1 147 0 5 1259 5926 150 24 58 chr13 88431225 88431714 -31852598 + Lx LINE L1 6195 6654 0 5 1259 1120 108 0 16 chr13 88432352 88432596 -31851716 + (GAAA)n Simple_repeat Simple_repeat 1 240 0 5 1259 6391 241 36 47 chr13 88432618 88434729 -31849583 + Lx7 LINE L1 3160 5247 -633 5 1259 444 37 0 0 chr13 88434729 88434783 -31849529 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 5 1259 491 118 0 0 chr13 88434784 88434860 -31849452 + BC1_Mm scRNA scRNA 1 76 -76 5 1259 342 0 0 0 chr13 88434860 88434898 -31849414 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 5 1259 2068 287 71 47 chr13 88434907 88435697 -31848615 + Lx7 LINE L1 5779 6587 -1109 5 1259 1147 250 34 16 chr13 88435706 88436027 -31848285 + Lx7 LINE L1 6689 7015 -681 5 1259 845 291 3 90 chr13 88436123 88436455 -31847857 - Lx6 LINE L1 -628 6832 6530 5 1259 21 57 0 0 chr13 88436762 88436797 -31847515 + AT_rich Low_complexity Low_complexity 1 35 0 5 1259 182 65 65 0 chr13 88437351 88437382 -31846930 + (TTTTC)n Simple_repeat Simple_repeat 3 35 0 5 1259 410 145 11 57 chr13 88438575 88438663 -31845649 - B1_Mus1 SINE Alu -32 116 33 5 1259 215 156 22 0 chr13 88438676 88438721 -31845591 + T-rich Low_complexity Low_complexity 2 47 0 5 1259 357 24 0 0 chr13 88439139 88439181 -31845131 + (TG)n Simple_repeat Simple_repeat 2 43 0 5 1259 918 157 28 0 chr13 88439214 88439392 -31844920 - L1_Mus3 LINE L1 -2 6636 6454 5 1259 27 62 0 0 chr13 88439955 88440003 -31844309 + AT_rich Low_complexity Low_complexity 1 48 0 5 1259 248 197 27 27 chr13 88440114 88440187 -31844125 + (TA)n Simple_repeat Simple_repeat 2 74 0 5 1259 770 288 35 81 chr13 88440382 88440730 -31843582 + MTE2a LTR MaLR 8 339 -40 5 1259 460 347 67 4 chr13 88440796 88441037 -31843275 + MTE-int LTR MaLR 21 265 -1105 5 1259 1622 224 149 53 chr13 88441257 88441748 -31842564 - RLTR20A LTR ERVK -2 539 2 5 1259 5432 169 62 14 chr13 88441749 88442952 -31841360 - MYSERV16_I-int LTR ERVK 0 2326 1067 5 1259 3366 205 89 47 chr13 88442957 88443881 -31840431 - MYSERV16_I-int LTR ERVK -1480 1362 6 5 1259 23 33 0 0 chr13 88443991 88444021 -31840291 + AT_rich Low_complexity Low_complexity 1 30 0 5 1259 860 256 102 29 chr13 88444649 88444894 -31839418 - RLTR20A LTR ERVK -278 263 1 5 1259 899 363 62 28 chr13 88445051 88445487 -31838825 - MTE-int LTR MaLR -195 1385 935 5 1259 250 322 74 34 chr13 88445484 88445632 -31838680 + MTD LTR MaLR 246 399 -20 6 1259 319 336 106 59 chr13 88445891 88446147 -31838165 - MLT1D LTR MaLR -210 295 28 6 1259 25 0 0 0 chr13 88447142 88447167 -31837145 + AT_rich Low_complexity Low_complexity 1 25 0 6 1259 452 306 54 137 chr13 88447578 88447892 -31836420 - MT2A LTR ERVL -72 461 174 6 1259 198 0 0 0 chr13 88447923 88447945 -31836367 + (TA)n Simple_repeat Simple_repeat 1 22 0 6 1259 2699 145 86 36 chr13 88447949 88448472 -31835840 - Lx3B LINE L1 -3 6970 6422 6 1259 504 138 25 0 chr13 88448469 88448549 -31835763 + Lx3C LINE L1 6322 6403 -573 6 1259 324 299 11 22 chr13 88448551 88448640 -31835672 - MT2A LTR ERVL -391 142 55 6 1259 341 280 178 0 chr13 88448566 88448673 -31835639 - MTE2a LTR MaLR -250 129 4 6 1259 2863 212 31 11 chr13 88449487 88450398 -31833914 - Lx3C LINE L1 -726 6250 5313 6 1259 15555 113 39 10 chr13 88450394 88453621 -31830691 + L1_Mus2 LINE L1 3234 6564 -2 6 1259 30 45 0 0 chr13 88453673 88453717 -31830595 + AT_rich Low_complexity Low_complexity 1 44 0 6 1259 2959 35 3 13 chr13 88453792 88454164 -31830148 + L1Md_F3 LINE L1 6216 6583 -1 6 1259 10323 175 58 14 chr13 88454235 88456476 -31827836 - Lx3C LINE L1 -597 5289 2951 6 1259 2310 182 49 0 chr13 88456467 88456957 -31827355 - MusHAL1 LINE L1 -2058 654 141 6 1259 845 224 45 0 chr13 88456957 88457158 -31827154 - L1VL4 LINE L1 -5579 723 514 6 1259 3954 159 16 37 chr13 88457456 88458425 -31825887 + L1VL4 LINE L1 194 1138 -2421 6 1259 591 53 0 0 chr13 88458433 88458508 -31825804 + (TA)n Simple_repeat Simple_repeat 1 75 0 6 1259 7757 146 6 4 chr13 88458509 88459862 -31824450 + L1VL4 LINE L1 1736 3090 -469 6 1259 7981 178 30 17 chr13 88459869 88462047 -31822265 + Lx2A1 LINE L1 4134 6346 -662 6 1259 432 51 0 0 chr13 88462047 88462106 -31822206 + (TTAG)n Simple_repeat Simple_repeat 3 61 0 6 1259 3753 166 34 3 chr13 88462624 88463278 -31821034 + Lx2A1 LINE L1 6334 7007 -1 6 1259 307 161 17 0 chr13 88463287 88463354 -31820958 + L1_Mur1 LINE L1 4284 4352 -1534 6 1259 226 111 0 0 chr13 88463345 88463390 -31820922 + Lx2A LINE L1 6962 7006 -2 6 1259 1699 191 39 0 chr13 88463386 88463747 -31820565 + L1_Mm LINE L1 4274 4648 -1235 6 1259 4089 141 22 7 chr13 88463740 88464419 -31819893 + L1VL2 LINE L1 278 966 -5369 6 1259 5687 3 0 0 chr13 88464405 88465043 -31819269 + L1Md_A LINE L1 4949 5586 -297 6 1259 8934 6 0 0 chr13 88465043 88466039 -31818273 + L1Md_A LINE L1 5587 6582 0 6 1259 9403 117 10 37 chr13 88466039 88467690 -31816622 + MusHAL1 LINE L1 465 2070 -642 6 1259 997 63 0 0 chr13 88467710 88467852 -31816460 - L1Md_F2 LINE L1 -3 6579 6438 6 1259 13124 78 4 9 chr13 88467922 88470408 -31813904 - L1Md_F2 LINE L1 -2 6580 4108 6 1259 10219 84 10 23 chr13 88470405 88471998 -31812314 - L1Md_F2 LINE L1 -3166 2717 1145 6 1259 201 74 0 0 chr13 88471998 88472025 -31812287 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 6 1259 4824 142 44 7 chr13 88472025 88472760 -31811552 - L1Md_F2 LINE L1 -5472 1144 382 6 157 11747 179 40 7 chr13 88472760 88476359 -31807953 + Lx2 LINE L1 3260 6990 -7 6 1260 192 77 0 0 chr13 88476387 88476413 -31807899 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1260 351 0 0 0 chr13 88476785 88476824 -31807488 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1260 365 309 72 78 chr13 88477169 88477569 -31806743 - MER63D DNA AcHobo -558 503 106 6 1260 21 36 0 0 chr13 88477572 88477600 -31806712 + AT_rich Low_complexity Low_complexity 1 28 0 6 1260 205 298 0 0 chr13 88478020 88478077 -31806235 + (TA)n Simple_repeat Simple_repeat 2 58 0 6 1260 261 383 41 105 chr13 88478470 88478642 -31805670 + RSINE1 SINE B4 4 164 -1 6 1260 602 154 0 51 chr13 88478651 88478808 -31805504 + (CATA)n Simple_repeat Simple_repeat 2 150 0 6 1260 27 0 0 0 chr13 88478861 88478888 -31805424 + AT_rich Low_complexity Low_complexity 1 27 0 6 1260 2773 54 0 3 chr13 88479802 88480156 -31804156 - L1Md_F2 LINE L1 -12 6570 6218 6 1260 1226 248 17 17 chr13 88480587 88480878 -31803434 - Lx5 LINE L1 -102 6948 6658 6 1260 194 151 0 36 chr13 88481156 88481211 -31803101 + A-rich Low_complexity Low_complexity 2 54 0 6 1260 341 297 60 23 chr13 88481957 88482257 -31802055 - L1M3 LINE L1 -786 5354 5044 6 1260 3031 254 65 23 chr13 88482454 88483368 -31800944 + Lx2B LINE L1 6006 6986 -14 6 1260 378 0 0 0 chr13 88483368 88483410 -31800902 + (TA)n Simple_repeat Simple_repeat 1 42 0 6 1260 470 148 10 0 chr13 88483663 88483764 -31800548 + (TG)n Simple_repeat Simple_repeat 1 102 0 6 1260 198 0 0 0 chr13 88483858 88483880 -31800432 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1260 3503 15 2 0 chr13 88483937 88484332 -31799980 + MTA_Mm LTR MaLR 1 396 0 6 1260 8886 39 3 3 chr13 88484333 88485430 -31798882 + MTA_Mm-int LTR MaLR 2 1098 0 6 1260 3502 15 2 0 chr13 88485430 88485825 -31798487 + MTA_Mm LTR MaLR 1 396 0 6 1260 195 100 0 0 chr13 88485933 88485963 -31798349 + (TA)n Simple_repeat Simple_repeat 1 30 0 6 1260 22 35 0 0 chr13 88486586 88486615 -31797697 + AT_rich Low_complexity Low_complexity 1 29 0 6 1260 2616 239 39 30 chr13 88487373 88488099 -31796213 + L1_Mur3 LINE L1 50 781 -6947 6 1260 1798 216 33 15 chr13 88488110 88488298 -31796014 + L1_Mur3 LINE L1 3861 4049 -1831 6 1260 2255 95 0 84 chr13 88488298 88488655 -31795657 - ORR1A2 LTR MaLR 0 327 1 6 1260 1798 216 33 15 chr13 88488655 88488922 -31795390 + L1_Mur3 LINE L1 4050 4324 -1556 6 1260 299 25 25 0 chr13 88488984 88489024 -31795288 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 1260 228 35 0 0 chr13 88489024 88489052 -31795260 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1260 1094 307 26 37 chr13 88489198 88489580 -31794732 - MTE2b LTR MaLR -1 378 1 6 1260 1075 303 57 6 chr13 88489719 88490071 -31794241 + ORR1D2 LTR MaLR 1 370 0 6 1260 500 89 13 0 chr13 88490688 88490767 -31793545 + (TG)n Simple_repeat Simple_repeat 1 80 0 6 1260 580 339 120 8 chr13 88490979 88491238 -31793074 + Lx8 LINE L1 6270 6557 -916 6 1260 3308 106 10 0 chr13 88491243 88491732 -31792580 - L1_Mm LINE L1 -1571 4312 3819 6 1260 6949 104 19 10 chr13 88491731 88492909 -31791403 + L1_Mus2 LINE L1 5363 6566 0 6 1260 4782 153 12 12 chr13 88493120 88493940 -31790372 - Lx2 LINE L1 0 6997 6178 6 1260 1878 205 79 2 chr13 88493940 88494345 -31789967 + Lx2 LINE L1 6562 6997 0 6 1260 468 0 0 0 chr13 88494543 88494595 -31789717 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1260 623 223 7 41 chr13 88494600 88494745 -31789567 + B1_Mur1 SINE Alu 2 141 -8 6 1260 29 0 0 0 chr13 88495010 88495039 -31789273 + AT_rich Low_complexity Low_complexity 1 29 0 6 1260 408 20 0 0 chr13 88495261 88495310 -31789002 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1260 1067 102 0 0 chr13 88495366 88495513 -31788799 + B1_Mus2 SINE Alu 1 147 0 6 1260 26 0 0 0 chr13 88495599 88495625 -31788687 + AT_rich Low_complexity Low_complexity 1 26 0 6 1260 460 239 80 6 chr13 88496658 88496835 -31787477 - L1_Mur3 LINE L1 -3 5877 5716 6 1260 1036 334 38 51 chr13 88497046 88497736 -31786576 - L1_Mur3 LINE L1 -171 5709 5029 6 1260 508 369 8 12 chr13 88497754 88498001 -31786311 + Lx8 LINE L1 6497 6742 -731 6 1260 2348 224 85 46 chr13 88498006 88498763 -31785549 + RMER19B LTR ERVK 1 902 0 6 1260 843 342 95 15 chr13 88498763 88499354 -31784958 + Lx8 LINE L1 6740 7377 -96 6 1260 476 149 33 8 chr13 88499356 88499478 -31784834 + GA-rich Low_complexity Low_complexity 2 126 0 6 1260 4579 152 41 9 chr13 88500650 88501447 -31782865 - Lx LINE L1 0 6654 5832 1 1260 9602 174 52 7 chr13 88501454 88503385 -31780927 - L1_Mur2 LINE L1 -666 5211 3195 2 1260 306 0 0 0 chr13 88503664 88503698 -31780614 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1260 352 317 112 5 chr13 88503780 88503967 -31780345 - L1M5 LINE L1 -3329 2817 2611 4 1260 236 346 65 47 chr13 88504560 88504730 -31779582 + MLT1B LTR MaLR 99 271 -119 5 1260 2725 55 3 11 chr13 88504973 88505322 -31778990 + ORR1A0 LTR MaLR 1 346 0 6 1260 207 0 0 0 chr13 88505340 88505363 -31778949 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1260 536 348 92 38 chr13 88505593 88505832 -31778480 - B4A SINE B4 0 292 41 8 1260 941 295 109 29 chr13 88505836 88506208 -31778104 + MTD LTR MaLR 1 379 0 9 1260 544 289 31 123 chr13 88506208 88506567 -31777745 + MTC-int LTR MaLR 1 326 -932 1 1260 1017 68 8 0 chr13 88506567 88506699 -31777613 + L1Md_F2 LINE L1 5997 6129 -453 1 1260 2552 99 21 11 chr13 88506696 88507072 -31777240 + L1_Mus2 LINE L1 6187 6566 0 1 1260 4538 161 21 12 chr13 88507286 88508090 -31776222 - Lx2 LINE L1 0 6997 6187 1 1260 1312 137 14 0 chr13 88508088 88508300 -31776012 + L1Md_F2 LINE L1 6365 6579 -3 1 1260 1042 304 74 62 chr13 88508304 88509102 -31775210 + MTC-int LTR MaLR 288 1097 -1 1 1260 569 351 135 3 chr13 88509138 88509427 -31774885 + MTD LTR MaLR 77 403 -16 1 1260 934 260 72 12 chr13 88509835 88510084 -31774228 - MTC LTR MaLR -55 366 103 1 1260 6973 47 0 0 chr13 88510084 88511257 -31773055 - L1Md_F2 LINE L1 -155 6427 5255 1 1260 1067 42 0 20 chr13 88511257 88511403 -31772909 + L1Md_F2 LINE L1 6428 6570 -12 1 1260 491 294 0 8 chr13 88511411 88511531 -31772781 - MTC LTR MaLR -302 119 1 1 1260 571 279 13 71 chr13 88511633 88511857 -31772455 + Lx6 LINE L1 7224 7434 -26 1 1260 303 49 0 0 chr13 88512080 88512121 -31772191 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1260 329 303 6 22 chr13 88512121 88512300 -31772012 + CT-rich Low_complexity Low_complexity 1 176 0 1 1260 633 326 30 15 chr13 88512694 88512893 -31771419 - MTE2b LTR MaLR -177 202 1 2 1260 29871 107 19 11 chr13 88513741 88519066 -31765246 + L1Md_F2 LINE L1 238 5585 -298 2 1260 7341 75 8 9 chr13 88519067 88520051 -31764261 + L1Md_F2 LINE L1 5587 6569 -13 2 1260 205 314 0 11 chr13 88520221 88520308 -31764004 + T-rich Low_complexity Low_complexity 2 87 0 2 1260 357 109 0 0 chr13 88520894 88520949 -31763363 + (TA)n Simple_repeat Simple_repeat 1 55 0 2 1260 3352 149 26 36 chr13 88521245 88521850 -31762462 - MT2B LTR ERVL 0 601 3 2 1260 1609 173 3 25 chr13 88522616 88522901 -31761411 - ORR1A2 LTR MaLR -47 280 2 2 1260 324 70 0 0 chr13 88522901 88522944 -31761368 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 2 1260 462 56 0 0 chr13 88523318 88523372 -31760940 + L1Md_F2 LINE L1 5533 5586 -297 2 1260 8240 38 5 0 chr13 88523373 88524360 -31759952 + L1Md_F2 LINE L1 5588 6579 -3 2 1260 195 167 0 0 chr13 88524481 88524523 -31759789 + GA-rich Low_complexity Low_complexity 3 44 0 2 1260 228 317 12 0 chr13 88524891 88524973 -31759339 + GA-rich Low_complexity Low_complexity 2 84 0 2 1260 3272 191 22 5 chr13 88525049 88525721 -31758591 - L1_Mur2 LINE L1 -87 5790 5107 3 1260 721 241 32 114 chr13 88525723 88525803 -31758509 + RMER20A LTR ERVK 1 82 -434 3 1260 3040 172 175 3 chr13 88525803 88526432 -31757880 - RMER19A LTR ERVK 0 737 1 3 1260 721 241 32 114 chr13 88526432 88526504 -31757808 + RMER20A LTR ERVK 83 148 -368 3 1260 339 25 0 0 chr13 88526504 88526544 -31757768 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1260 721 241 32 114 chr13 88526544 88526610 -31757702 + RMER20A LTR ERVK 149 202 -314 3 1260 5441 178 14 42 chr13 88526612 88527442 -31756870 - L1_Mur2 LINE L1 -1558 4319 3481 3 1260 180 77 0 0 chr13 88527442 88527468 -31756844 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 3 1260 5441 178 14 42 chr13 88527468 88527852 -31756460 - L1_Mur2 LINE L1 -2397 3480 3139 3 1260 10121 175 20 32 chr13 88527851 88530047 -31754265 + Lx LINE L1 2268 4435 -1451 3 1260 1964 157 35 11 chr13 88530047 88530390 -31753922 + RMER17D LTR ERVK 1 354 -535 3 1260 1148 18 17 34 chr13 88530390 88530565 -31753747 + (TCTCC)n Simple_repeat Simple_repeat 2 173 0 3 1260 1964 153 84 29 chr13 88530565 88530906 -31753406 + RMER17D LTR ERVK 355 751 0 3 1260 7259 187 9 3 chr13 88530906 88533120 -31751192 + Lx LINE L1 4430 6654 0 3 1260 344 310 47 57 chr13 88533370 88533863 -31750449 + L1MA6 LINE L1 3520 4010 -2133 3 1260 258 279 79 19 chr13 88533895 88534162 -31750150 + L1MA6 LINE L1 4310 4592 -1551 3 1260 1504 244 39 30 chr13 88534237 88534601 -31749711 - ORR1B2 LTR MaLR 0 367 1 3 1260 424 322 59 40 chr13 88534608 88535154 -31749158 + L1MA6 LINE L1 4730 5285 -858 3 1260 886 301 74 21 chr13 88535237 88535767 -31748545 + L1MA6 LINE L1 5386 5943 -357 3 1260 8255 167 30 12 chr13 88536041 88537440 -31746872 + L1VL2 LINE L1 445 1862 -1753 4 1260 2723 64 3 0 chr13 88537440 88537785 -31746527 + ORR1A1 LTR MaLR 1 346 0 4 1260 8255 159 31 13 chr13 88537785 88538480 -31745832 + L1VL2 LINE L1 1863 2578 -1037 4 1260 6695 89 3 1 chr13 88538465 88539387 -31744925 + L1Md_F2 LINE L1 4662 5585 -298 4 1260 7047 92 5 13 chr13 88539388 88539913 -31744399 + L1Md_F2 LINE L1 5587 6112 -470 4 1260 3729 35 5 0 chr13 88539913 88540347 -31743965 - RLTR10C LTR ERVK 0 436 1 4 1260 7047 92 5 13 chr13 88540347 88540825 -31743487 + L1Md_F2 LINE L1 6113 6582 0 4 1260 6166 153 12 22 chr13 88540827 88541898 -31742414 + Lx2B LINE L1 5750 6851 -149 4 1260 262 258 32 0 chr13 88542475 88542537 -31741775 + Lx8 LINE L1 7252 7315 -158 4 1260 396 97 0 0 chr13 88542548 88542610 -31741702 + (CAAG)n Simple_repeat Simple_repeat 1 62 0 4 1260 342 182 0 0 chr13 88543398 88543464 -31740848 + RLTR9A LTR ERVK 303 368 0 4 1260 246 191 30 45 chr13 88543617 88543683 -31740629 - RLTR41 LTR ERV1 -53 393 329 4 1260 4753 179 46 47 chr13 88544338 88545476 -31738836 + ETnERV2-int LTR ERVK 1053 2189 -5217 4 1260 673 277 5 2 chr13 88545587 88545835 -31738477 + RMER16-int LTR ERVK 2189 2299 -5107 5 1260 2407 189 53 6 chr13 88545919 88545985 -31738327 + RLTR1 LTR ERV1 129 206 -418 5 1260 2899 41 25 0 chr13 88545985 88546348 -31737964 + L1Md_F3 LINE L1 6212 6583 -1 5 1260 2407 189 53 6 chr13 88546348 88546755 -31737557 + RLTR1 LTR ERV1 207 623 -1 5 1260 9482 195 70 67 chr13 88546765 88547659 -31736653 + RMER16-int LTR ERVK 1566 2110 -3296 5 1260 1100 95 0 13 chr13 88547659 88547808 -31736504 + B1_Mus2 SINE Alu 1 147 0 5 1260 9482 169 83 66 chr13 88547808 88548589 -31735723 + RMER16-int LTR ERVK 2111 2864 -2542 5 1260 504 0 0 0 chr13 88548589 88548645 -31735667 + (TA)n Simple_repeat Simple_repeat 2 57 0 5 1260 9482 169 83 66 chr13 88548645 88549422 -31734890 + RMER16-int LTR ERVK 2865 3660 -1746 5 1260 264 59 0 0 chr13 88549422 88549456 -31734856 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 5 1260 9482 208 74 49 chr13 88549456 88549822 -31734490 + RMER16-int LTR ERVK 3661 3866 -1540 5 1260 256 265 49 41 chr13 88549950 88550072 -31734240 + RMER16-int LTR ERVK 6306 6428 -978 5 1260 1645 121 19 11 chr13 88550334 88550601 -31733711 + RLTR9A LTR ERVK 1 269 -99 5 1260 35342 75 3 9 chr13 88550609 88556016 -31728296 + L1Md_F3 LINE L1 446 5793 -90 5 1260 1992 66 0 4 chr13 88556016 88556275 -31728037 - L1Md_F2 LINE L1 -11 6571 6314 5 1260 35342 47 8 18 chr13 88556275 88557051 -31727261 + L1Md_F3 LINE L1 5794 6559 -25 5 1260 555 132 9 19 chr13 88557051 88557159 -31727153 + RLTR9A LTR ERVK 252 358 -10 5 1260 1029 192 145 12 chr13 88557267 88557515 -31726797 - ORR1C2 LTR MaLR -94 290 10 5 1260 24 32 0 0 chr13 88560484 88560515 -31723797 + AT_rich Low_complexity Low_complexity 1 31 0 6 1260 1028 116 0 0 chr13 88560895 88561041 -31723271 - B1_Mus1 SINE Alu 0 148 3 6 1260 225 260 0 40 chr13 88561079 88561155 -31723157 + L1_Mur3 LINE L1 5332 5404 -476 6 1260 608 161 42 8 chr13 88561161 88561280 -31723032 + B2_Mm2 SINE B2 47 169 -26 6 1260 551 331 9 28 chr13 88561283 88561527 -31722785 + L1_Rod LINE L1 5428 5650 -197 6 1260 25 0 0 0 chr13 88561546 88561571 -31722741 + AT_rich Low_complexity Low_complexity 1 25 0 6 1260 1796 271 28 37 chr13 88561599 88562109 -31722203 - RLTR16 LTR ERVK 0 505 1 6 1260 443 221 35 0 chr13 88562111 88562224 -31722088 + L1_Rod LINE L1 5720 5836 -11 6 1260 189 94 0 0 chr13 88562224 88562256 -31722056 + (CAAAAA)n Simple_repeat Simple_repeat 5 36 0 6 1260 249 155 0 0 chr13 88562574 88562632 -31721680 + A-rich Low_complexity Low_complexity 1 58 0 6 1260 688 301 130 37 chr13 88563186 88563662 -31720650 + ORR1C2-int LTR MaLR 642 1251 -119 6 1260 271 246 49 45 chr13 88563660 88563757 -31720555 - PB1D9 SINE Alu 0 120 21 7 1260 855 189 95 22 chr13 88563930 88563966 -31720346 + ORR1C2 LTR MaLR 140 175 -209 6 1260 252 0 0 0 chr13 88563966 88563994 -31720318 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 7 1260 780 32 0 0 chr13 88563996 88564091 -31720221 + (TC)n Simple_repeat Simple_repeat 2 96 0 7 1260 855 189 95 22 chr13 88564091 88564230 -31720082 + ORR1C2 LTR MaLR 176 331 -53 6 1260 649 312 28 14 chr13 88564796 88565007 -31719305 + B3 SINE B2 1 214 -2 7 1260 24 91 0 0 chr13 88565209 88565275 -31719037 + AT_rich Low_complexity Low_complexity 1 66 0 7 1260 23 68 0 0 chr13 88565297 88565341 -31718971 + AT_rich Low_complexity Low_complexity 1 44 0 7 1260 3972 201 81 30 chr13 88565832 88566800 -31717512 + RLTR25B LTR ERVK 9 1025 -3 7 1260 229 234 136 27 chr13 88567417 88567527 -31716785 - Lx8 LINE L1 -2 7471 7350 7 1260 1188 237 59 38 chr13 88567839 88568126 -31716186 - RMER6D LTR ERVK 0 720 427 7 1260 1368 256 87 17 chr13 88568126 88568645 -31715667 + RLTR20B3 LTR ERVK 1 559 -4 7 1260 1852 213 47 37 chr13 88568641 88569070 -31715242 - RMER6D LTR ERVK -287 433 1 7 1260 1304 197 179 7 chr13 88569354 88569661 -31714651 + RMER6D LTR ERVK 2 361 -359 8 1260 6249 87 1 1 chr13 88569663 88570731 -31713581 - L1_Mus1 LINE L1 -474 6092 5025 8 1260 796 71 0 0 chr13 88570729 88570828 -31713484 + L1_Mus1 LINE L1 6111 6209 -358 8 1260 635 188 0 0 chr13 88570828 88570945 -31713367 + RMER6D LTR ERVK 572 688 -2 8 1260 35 41 0 0 chr13 88571274 88571323 -31712989 + AT_rich Low_complexity Low_complexity 1 49 0 8 1260 2382 252 75 21 chr13 88571676 88572346 -31711966 - Lx7 LINE L1 -281 7415 6710 8 1260 243 88 0 0 chr13 88572847 88572881 -31711431 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 1260 33 80 0 0 chr13 88573557 88573632 -31710680 + AT_rich Low_complexity Low_complexity 1 75 0 8 1260 524 329 37 46 chr13 88573734 88574059 -31710253 - Lx9 LINE L1 -145 7499 7178 8 1260 520 314 94 52 chr13 88574062 88574274 -31710038 - RMER12 LTR ERVK 0 1322 1102 8 1260 3433 188 92 28 chr13 88574373 88575050 -31709262 - RLTR22_Mur LTR ERVK -961 887 188 8 1260 501 92 0 0 chr13 88575050 88575126 -31709186 + (TA)n Simple_repeat Simple_repeat 2 77 0 8 1260 3433 188 92 28 chr13 88575126 88575281 -31709031 - RLTR22_Mur LTR ERVK -1661 187 1 8 1260 483 280 15 90 chr13 88575281 88575481 -31708831 - Lx9 LINE L1 -464 7180 6996 8 1260 1259 297 114 2 chr13 88575491 88575974 -31708338 + Lx9 LINE L1 6372 6908 -736 8 1260 309 26 0 0 chr13 88576239 88576277 -31708035 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 9 1260 3474 64 0 0 chr13 88577133 88577572 -31706740 - L1_Mus1 LINE L1 -50 6517 6079 9 1260 2603 80 6 3 chr13 88577569 88577922 -31706390 + L1_Mus1 LINE L1 5738 6091 -476 9 1260 218 147 29 29 chr13 88577967 88578037 -31706275 + (TA)n Simple_repeat Simple_repeat 2 71 0 9 1260 29 28 0 0 chr13 88578335 88578371 -31705941 + AT_rich Low_complexity Low_complexity 1 36 0 9 1260 194 377 80 24 chr13 88578371 88578496 -31705816 + L2b LINE L2 3244 3375 0 9 1260 585 0 0 0 chr13 88579155 88579220 -31705092 + (TC)n Simple_repeat Simple_repeat 2 66 0 9 1260 614 217 43 21 chr13 88579228 88579369 -31704943 + RMER10B LTR ERVL 255 398 0 9 1260 1889 181 3 12 chr13 88579479 88579809 -31704503 - ORR1A2 LTR MaLR 0 327 1 9 1260 1088 61 7 0 chr13 88579962 88580132 -31704180 - L1Md_F2 LINE L1 0 6582 6418 9 1260 574 261 99 45 chr13 88581089 88581330 -31702982 - MTD LTR MaLR -152 227 1 9 1260 845 19 0 10 chr13 88581566 88581670 -31702642 + (GAA)n Simple_repeat Simple_repeat 2 104 0 1 1260 228 67 0 0 chr13 88581766 88581796 -31702516 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1260 352 276 28 9 chr13 88581988 88582094 -31702218 - Lx7 LINE L1 -584 7112 7005 1 1260 252 266 47 0 chr13 88582320 88582384 -31701928 - RMER10B LTR ERVL -11 387 321 1 1260 209 267 0 16 chr13 88582388 88582449 -31701863 + GA-rich Low_complexity Low_complexity 2 61 0 1 1260 367 242 30 78 chr13 88582703 88582844 -31701468 + B1F SINE Alu 10 149 0 1 1260 5428 200 63 57 chr13 88584473 88585771 -31698541 + Lx2B LINE L1 5551 6873 -127 1 1260 1875 218 48 33 chr13 88585813 88586272 -31698040 - RLTR31A_Mm LTR ERVK -118 466 1 1 1260 454 335 119 18 chr13 88586516 88586735 -31697577 + MLT1A1 LTR MaLR 167 407 -1 1 1260 24 53 0 0 chr13 88587011 88587049 -31697263 + AT_rich Low_complexity Low_complexity 1 38 0 1 1260 235 263 27 0 chr13 88587294 88587362 -31696950 + RLTR20B2 LTR ERVK 442 521 -56 1 1260 303 290 133 33 chr13 88587371 88587386 -31696926 + RLTR20B3 LTR ERVK 305 319 -222 1 1260 413 227 0 0 chr13 88587386 88587461 -31696851 - tRNA-Lys-AAG tRNA tRNA 0 76 2 1 1260 700 184 130 13 chr13 88587461 88587615 -31696697 + RLTR20B3 LTR ERVK 351 522 -55 1 1260 281 26 26 0 chr13 88587770 88587808 -31696504 + (TA)n Simple_repeat Simple_repeat 1 39 0 1 1260 606 63 0 0 chr13 88587808 88587887 -31696425 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 1260 313 350 53 24 chr13 88588211 88588457 -31695855 - RLTR12B LTR ERVK -34 494 242 1 1260 409 319 82 59 chr13 88588428 88588684 -31695628 - RLTR12B LTR ERVK -206 322 61 1 1260 189 154 0 0 chr13 88589566 88589605 -31694707 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1260 294 343 73 11 chr13 88589817 88589994 -31694318 + Tigger1 DNA MER2_type 15 202 -2216 1 1260 709 323 25 10 chr13 88590081 88590278 -31694034 - B4A SINE B4 -2 290 91 1 1260 837 330 104 35 chr13 88590279 88590942 -31693370 + Lx8 LINE L1 6395 7107 -589 1 1260 211 220 0 0 chr13 88592341 88592391 -31691921 + T-rich Low_complexity Low_complexity 1 50 0 1 1260 1585 276 77 10 chr13 88592395 88592874 -31691438 - Lx5 LINE L1 0 7050 6540 1 1260 1133 71 0 6 chr13 88592920 88593077 -31691235 + (TTCC)n Simple_repeat Simple_repeat 2 157 0 1 1260 4328 178 49 14 chr13 88593092 88593304 -31691008 - L1_Mur2 LINE L1 -2782 3095 2872 1 1260 207 0 0 0 chr13 88593304 88593327 -31690985 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1 1260 4328 194 45 55 chr13 88593327 88594014 -31690298 - L1_Mur2 LINE L1 -2998 2888 2166 1 1260 1798 171 56 35 chr13 88594014 88594212 -31690100 + RMER17C LTR ERVK 1 214 -196 1 1260 453 19 0 0 chr13 88594212 88594266 -31690046 + (TG)n Simple_repeat Simple_repeat 1 54 0 1 1260 1798 171 56 35 chr13 88594266 88594461 -31689851 + RMER17C LTR ERVK 215 402 -8 1 1260 4551 219 27 133 chr13 88594461 88594580 -31689732 - L1_Mur2 LINE L1 -3706 2180 2054 1 1260 462 120 0 0 chr13 88594580 88594655 -31689657 + (TG)n Simple_repeat Simple_repeat 2 76 0 1 1260 4551 168 19 22 chr13 88594655 88594732 -31689580 - L1_Mur2 LINE L1 -3824 2053 1982 1 1260 2154 183 87 79 chr13 88594732 88595261 -31689051 + RMER16 LTR ERVK 1 533 0 1 1260 4551 168 19 22 chr13 88595261 88595838 -31688474 - L1_Mur2 LINE L1 -3896 1981 1402 1 1260 1929 139 77 130 chr13 88595838 88596292 -31688020 + RLTR23 LTR ERV1 1 430 0 1 1260 4551 169 20 8 chr13 88596292 88596868 -31687444 - L1_Mur2 LINE L1 -4476 1401 817 1 1260 585 64 0 0 chr13 88598108 88598186 -31686126 + (TC)n Simple_repeat Simple_repeat 2 79 0 1 1260 328 335 50 69 chr13 88599216 88599434 -31684878 + Zaphod DNA Tip100 275 488 -3543 1 1260 392 279 35 35 chr13 88599528 88599643 -31684669 + ORR1C1 LTR MaLR 58 172 -195 1 1260 188 111 28 0 chr13 88599654 88599690 -31684622 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1260 1013 223 9 9 chr13 88599695 88599908 -31684404 + ORR1C1 LTR MaLR 166 378 0 1 1260 266 259 47 0 chr13 88599953 88600038 -31684274 + Lx9 LINE L1 6912 7000 -644 1 1260 516 298 138 57 chr13 88600176 88600689 -31683623 + Zaphod DNA Tip100 2523 3077 -954 1 1260 387 0 0 0 chr13 88600709 88600752 -31683560 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 1 1260 1685 189 3 28 chr13 88600840 88601166 -31683146 + RLTR20A2 LTR ERVK 1 318 -260 1 1260 1528 185 14 84 chr13 88601180 88601598 -31682714 - RMER17C LTR ERVK -21 389 1 1 1260 1215 199 3 125 chr13 88601598 88601900 -31682412 + RLTR20A2 LTR ERVK 314 578 0 1 1260 267 304 61 20 chr13 88601937 88602085 -31682227 + Zaphod DNA Tip100 3395 3548 -483 1 1260 304 290 30 8 chr13 88602323 88602455 -31681857 - L1MA9 LINE L1 -64 6248 6114 1 1261 276 30 0 0 chr13 88605591 88605624 -31678688 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1261 2809 96 5 0 chr13 88606031 88606429 -31677883 + MTB LTR MaLR 1 400 0 1 1261 1081 83 7 0 chr13 88606641 88606786 -31677526 + B1_Mus2 SINE Alu 1 146 -1 1 1261 252 71 0 51 chr13 88606786 88606845 -31677467 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 1 1261 644 182 0 67 chr13 88607275 88607440 -31676872 - RMER1B Other Other -23 1043 890 1 1261 1369 202 55 1 chr13 88607435 88607816 -31676496 - L1_Mur2 LINE L1 -1504 4379 3934 1 1261 2126 214 76 0 chr13 88607814 88608342 -31675970 - L1_Mur2 LINE L1 -2449 3428 2861 1 1261 776 164 17 12 chr13 88608342 88608515 -31675797 + CT-rich Low_complexity Low_complexity 1 174 0 1 1261 264 213 0 0 chr13 88608515 88608576 -31675736 - L1_Mur2 LINE L1 -2995 2891 2831 1 1261 18281 125 7 22 chr13 88608572 88612035 -31672277 - L1_Mus3 LINE L1 -398 6240 2836 1 1261 417 277 140 22 chr13 88612056 88612286 -31672026 - L1_Mus3 LINE L1 -5795 821 409 1 1261 948 172 23 221 chr13 88612270 88612534 -31671778 - L1_Mur2 LINE L1 -1093 2821 2625 1 1261 1081 82 0 13 chr13 88612534 88612683 -31671629 + B1_Mus2 SINE Alu 1 147 0 1 1261 948 164 23 197 chr13 88612683 88612974 -31671338 - L1_Mur2 LINE L1 -3257 2629 2389 1 1261 1618 50 30 0 chr13 88613327 88613529 -31670783 + L1Md_T LINE L1 5379 5586 -297 1 1261 8303 39 0 0 chr13 88613530 88614525 -31669787 + L1Md_T LINE L1 5588 6582 0 1 1261 648 120 0 0 chr13 88615809 88615909 -31668403 + (TTTC)n Simple_repeat Simple_repeat 2 101 0 1 1261 459 35 0 0 chr13 88616270 88616327 -31667985 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 1261 26 0 0 0 chr13 88616833 88616859 -31667453 + AT_rich Low_complexity Low_complexity 1 26 0 1 1261 24 77 0 0 chr13 88617357 88617409 -31666903 + AT_rich Low_complexity Low_complexity 1 52 0 1 1261 3754 47 2 4 chr13 88617491 88617958 -31666354 - L1Md_F2 LINE L1 0 6582 6117 1 1261 1347 38 12 0 chr13 88617958 88618145 -31666167 + L1_Mm LINE L1 5378 5572 -305 1 1261 310 68 53 26 chr13 88618691 88618767 -31665545 + (CAAAAA)n Simple_repeat Simple_repeat 1 78 0 1 1261 24 0 0 0 chr13 88618965 88618989 -31665323 + AT_rich Low_complexity Low_complexity 1 24 0 1 1261 797 47 0 9 chr13 88619010 88619117 -31665195 + (GA)n Simple_repeat Simple_repeat 1 106 0 1 1261 1386 154 163 0 chr13 88620687 88620983 -31663329 - RLTR15 LTR ERVK -15 344 1 1 1261 1565 326 59 29 chr13 88621807 88622490 -31661822 + Lx8 LINE L1 6564 7266 -207 1 1261 293 309 0 0 chr13 88622490 88622558 -31661754 + RMER15 LTR ERVL 403 470 -105 1 1261 361 353 40 0 chr13 88623683 88623833 -31660479 - L3 LINE CR1 -7 4482 4327 1 1261 1779 198 71 0 chr13 88624674 88625038 -31659274 + MTC LTR MaLR 26 415 -6 1 1261 25 0 0 0 chr13 88625084 88625109 -31659203 + AT_rich Low_complexity Low_complexity 1 25 0 1 1261 715 264 85 74 chr13 88625360 88625630 -31658682 - Lx9 LINE L1 -928 6716 6444 1 1261 587 264 123 4 chr13 88625886 88626129 -31658183 + Lx9 LINE L1 7352 7623 -21 1 1261 5972 259 46 25 chr13 88626178 88627686 -31656626 - Lx6 LINE L1 -98 7362 5835 1 1261 291 28 0 0 chr13 88627686 88627722 -31656590 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1 1261 5972 259 46 25 chr13 88627722 88627857 -31656455 - Lx6 LINE L1 -1626 5834 5687 1 1261 1013 46 8 0 chr13 88628985 88629116 -31655196 + (TATATG)n Simple_repeat Simple_repeat 1 132 0 1 1261 408 88 0 0 chr13 88629304 88629361 -31654951 + (TC)n Simple_repeat Simple_repeat 1 57 0 1 1261 342 0 0 0 chr13 88629380 88629418 -31654894 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1261 933 80 0 0 chr13 88629418 88629543 -31654769 - B1_Mm SINE Alu -21 126 2 1 1261 193 57 28 28 chr13 88629547 88629583 -31654729 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 1 1261 257 322 0 11 chr13 88630428 88630522 -31653790 + RMER17C-int LTR ERVK 362 454 -2784 1 1261 5749 279 45 62 chr13 88630565 88631302 -31653010 + RodERV21-int LTR ERV1 709 1408 -3583 1 1261 1503 68 0 0 chr13 88631302 88631492 -31652820 + B2_Mm1t SINE B2 2 191 -2 1 1261 5749 279 45 62 chr13 88631492 88631962 -31652350 + RodERV21-int LTR ERV1 1409 1869 -3122 1 1261 1130 71 0 0 chr13 88631962 88632102 -31652210 + B1_Mus1 SINE Alu 3 142 -6 1 1261 360 0 0 0 chr13 88632110 88632150 -31652162 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 1 1261 5749 279 45 62 chr13 88632150 88632976 -31651336 + RodERV21-int LTR ERV1 1870 2718 -2273 1 1261 189 0 0 0 chr13 88633015 88633036 -31651276 + (TC)n Simple_repeat Simple_repeat 1 21 0 1 1261 420 302 23 41 chr13 88633107 88633445 -31650867 + RodERV21-int LTR ERV1 3482 3900 -3191 1 1261 36461 31 7 7 chr13 88633849 88639018 -31645294 + L1Md_T LINE L1 422 5585 -298 1 1261 8350 35 1 0 chr13 88639019 88640012 -31644300 + L1Md_T LINE L1 5587 6580 -2 1 1261 243 0 0 0 chr13 88640032 88640059 -31644253 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1261 189 0 0 0 chr13 88640233 88640254 -31644058 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1261 339 89 0 0 chr13 88640255 88640311 -31644001 + (CAAAA)n Simple_repeat Simple_repeat 1 56 0 1 1261 250 189 38 0 chr13 88640666 88640719 -31643593 + RodERV21-int LTR ERV1 3990 4044 -3557 1 1261 381 294 42 50 chr13 88641341 88641799 -31642513 + MER52-int LTR ERV1 4890 5772 -1319 1 1261 3963 338 31 41 chr13 88641808 88643894 -31640418 + RodERV21-int LTR ERV1 2729 4793 -198 1 1261 347 285 53 61 chr13 88643950 88644081 -31640231 + RMER4B LTR ERVK 347 476 -109 1 1261 417 172 0 0 chr13 88644382 88644504 -31639808 + (TAGA)n Simple_repeat Simple_repeat 1 122 0 1 1261 529 310 108 35 chr13 88644550 88644864 -31639448 + Lx8 LINE L1 6200 6536 -937 1 1261 613 126 0 0 chr13 88644923 88645018 -31639294 - Lx3_Mus LINE L1 -219 6790 6696 1 1261 321 298 45 63 chr13 88645445 88645556 -31638756 - ORR1D2 LTR MaLR -132 238 130 1 1261 1175 347 31 18 chr13 88645557 88646071 -31638241 - Lx8 LINE L1 -653 6820 6300 1 1261 948 99 0 0 chr13 88646387 88646538 -31637774 + (TC)n Simple_repeat Simple_repeat 1 151 0 1 1261 266 73 24 0 chr13 88646590 88646631 -31637681 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 1 1261 24 32 0 0 chr13 88646876 88646907 -31637405 + AT_rich Low_complexity Low_complexity 1 31 0 1 1261 676 211 0 22 chr13 88648605 88648789 -31635523 + GA-rich Low_complexity Low_complexity 1 180 0 1 1261 227 262 32 16 chr13 88648801 88648863 -31635449 + MTEb LTR MaLR 169 231 -148 1 1261 236 345 0 0 chr13 88650218 88650302 -31634010 + CT-rich Low_complexity Low_complexity 1 84 0 1 1261 318 67 0 0 chr13 88651739 88651784 -31632528 + (CAA)n Simple_repeat Simple_repeat 1 45 0 1 1261 1162 285 43 86 chr13 88652223 88652726 -31631586 - RMER19C LTR ERVK -2 735 183 1 1261 339 130 0 0 chr13 88652726 88652780 -31631532 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1261 402 74 0 0 chr13 88652796 88652850 -31631462 + (TA)n Simple_repeat Simple_repeat 2 55 0 2 1261 665 219 35 40 chr13 88652850 88653050 -31631262 - RMER19C LTR ERVK -411 200 2 1 1261 258 136 0 0 chr13 88653068 88653112 -31631200 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1261 580 279 0 13 chr13 88653896 88654045 -31630267 + B1_Mur2 SINE Alu 3 149 0 2 1261 218 32 0 31 chr13 88654069 88654101 -31630211 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1261 2116 244 43 8 chr13 88654346 88654878 -31629434 - Lx4B LINE L1 -36 7022 6472 2 1261 1559 240 67 0 chr13 88655017 88655375 -31628937 - Lx4B LINE L1 -579 6479 6098 2 1261 8779 185 23 2 chr13 88655385 88655461 -31628851 + Lx2A1 LINE L1 4115 4190 -1687 2 1261 441 0 0 0 chr13 88655461 88655510 -31628802 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1261 8933 164 18 4 chr13 88655510 88658275 -31626037 + Lx2A1 LINE L1 4191 7008 0 2 1261 4548 141 16 54 chr13 88658307 88659177 -31625135 + L1_Mur2 LINE L1 4279 5115 -762 2 1261 183 80 0 0 chr13 88660410 88660435 -31623877 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1261 363 127 0 14 chr13 88660441 88660513 -31623799 - L1Md_A LINE L1 0 6582 6512 2 1261 2125 58 27 10 chr13 88660516 88660813 -31623499 - IAPLTR2b LTR ERVK -2 325 24 2 1261 1079 21 0 67 chr13 88660813 88660962 -31623350 - L1_Mus1 LINE L1 -76 6491 6353 2 1261 2034 144 289 18 chr13 88661168 88661614 -31622698 - RMER2 LTR ERV1 0 567 1 2 1261 270 304 43 0 chr13 88661720 88661835 -31622477 + L1MA6 LINE L1 6176 6295 -5 2 1261 26893 88 11 4 chr13 88663592 88669796 -31614516 - L1Md_F2 LINE L1 -4 6578 330 2 1261 286 253 12 12 chr13 88669780 88669860 -31614452 - L1Md_F2 LINE L1 -5973 643 564 2 1261 3451 172 3 48 chr13 88670229 88670895 -31613417 - Lx3B LINE L1 -6 6967 6332 2 1261 991 146 67 10 chr13 88670895 88671054 -31613258 - L1_Mur1 LINE L1 -1310 4576 4420 2 1261 432 0 0 0 chr13 88671054 88671102 -31613210 + (TC)n Simple_repeat Simple_repeat 1 48 0 2 1261 991 146 67 10 chr13 88671102 88671136 -31613176 - L1_Mur1 LINE L1 -1467 4419 4373 2 1261 10066 132 26 83 chr13 88671106 88673238 -31611074 + L1_Mur1 LINE L1 2097 4105 -1781 2 1261 890 111 283 6 chr13 88673937 88674153 -31610159 + L1_Mur1 LINE L1 4087 4366 -1520 2 1261 683 305 128 29 chr13 88674772 88675123 -31609189 - Lx6 LINE L1 -30 7430 7045 2 1261 2687 222 4 6 chr13 88675120 88675622 -31608690 - Lx5 LINE L1 -104 6946 6446 2 1261 2253 192 41 31 chr13 88675623 88676138 -31608174 - L1_Mur2 LINE L1 -693 5184 4665 2 1261 1326 78 0 0 chr13 88676139 88676319 -31607993 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2 1261 288 130 0 0 chr13 88676319 88676365 -31607947 + (TCC)n Simple_repeat Simple_repeat 3 48 0 2 1261 232 182 0 0 chr13 88676369 88676413 -31607899 + MTEa LTR MaLR 336 379 0 2 1261 360 0 0 0 chr13 88676560 88676600 -31607712 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2 1261 3047 201 23 15 chr13 88676601 88677259 -31607053 - Lx3C LINE L1 -11 6965 6303 2 1261 916 52 7 29 chr13 88677267 88677406 -31606906 - L1Md_F3 LINE L1 -14 6570 6435 2 1261 3333 46 19 0 chr13 88677406 88677822 -31606490 + L1Md_F3 LINE L1 6041 6464 -120 2 1261 1972 185 129 22 chr13 88677802 88678266 -31606046 - Lx3C LINE L1 -679 6297 5784 2 1261 28172 112 3 13 chr13 88678268 88683395 -31600917 - L1_Mus2 LINE L1 0 6566 1493 2 1261 526 271 6 19 chr13 88683650 88683808 -31600504 - RNERVK23-int LTR ERVK -7872 345 190 2 1261 408 289 24 54 chr13 88684012 88684180 -31600132 - RNLTR23 LTR ERVK 0 642 480 2 1261 2735 197 41 24 chr13 88684414 88685091 -31599221 - L1_Mur2 LINE L1 -2143 3734 3046 2 1261 24 77 0 0 chr13 88685313 88685365 -31598947 + AT_rich Low_complexity Low_complexity 1 52 0 2 1261 21 0 0 0 chr13 88685795 88685816 -31598496 + AT_rich Low_complexity Low_complexity 1 21 0 2 1261 746 187 0 6 chr13 88688185 88688341 -31595971 + GA-rich Low_complexity Low_complexity 2 156 0 2 1261 288 91 49 31 chr13 88688369 88688449 -31595863 + ORR1A3 LTR MaLR 1 91 -238 2 1261 2720 186 70 28 chr13 88688456 88689027 -31595285 + RLTR17 LTR ERVK 98 692 0 2 1261 1343 172 17 109 chr13 88689030 88689323 -31594989 + ORR1B1 LTR MaLR 121 386 -8 2 1261 209 98 24 0 chr13 88689342 88689383 -31594929 + (CAAAAA)n Simple_repeat Simple_repeat 3 44 0 2 1261 5146 140 91 19 chr13 88689635 88690193 -31594119 - RMER17B LTR ERVK 0 958 340 2 1261 548 29 14 0 chr13 88690193 88690263 -31594049 + (GA)n Simple_repeat Simple_repeat 1 71 0 2 1261 5146 140 91 19 chr13 88690263 88690598 -31593714 - RMER17B LTR ERVK -619 339 2 2 1261 287 324 108 26 chr13 88690627 88690858 -31593454 - L1MC LINE L1 -1168 4978 4729 2 1261 996 125 0 14 chr13 88691072 88691218 -31593094 + B1_Mus1 SINE Alu 5 148 0 2 1261 21 0 0 0 chr13 88691218 88691239 -31593073 + AT_rich Low_complexity Low_complexity 1 21 0 2 1261 1026 311 66 62 chr13 88691476 88692208 -31592104 + L1MC1 LINE L1 5599 6333 0 2 1261 12408 133 24 11 chr13 88695081 88697900 -31586412 + L1VL1 LINE L1 194 3050 -648 2 1261 296 24 0 24 chr13 88698316 88698358 -31585954 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 2 1261 221 57 0 28 chr13 88701621 88701657 -31582655 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1261 28 29 0 0 chr13 88702007 88702042 -31582270 + AT_rich Low_complexity Low_complexity 1 35 0 2 1261 447 342 167 25 chr13 88702366 88702690 -31581622 + MLT2B3 LTR ERVL 4 373 -181 2 1261 339 119 0 0 chr13 88702714 88702781 -31581531 + (T)n Simple_repeat Simple_repeat 1 67 0 2 1261 207 123 52 17 chr13 88703114 88703172 -31581140 + (TATAA)n Simple_repeat Simple_repeat 1 60 0 2 1261 315 49 0 0 chr13 88703202 88703243 -31581069 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1261 351 344 142 25 chr13 88703695 88704133 -31580179 - L1MC2 LINE L1 -497 5847 5359 2 1261 22 0 0 0 chr13 88705232 88705254 -31579058 + AT_rich Low_complexity Low_complexity 1 22 0 2 1261 567 0 0 0 chr13 88705504 88705567 -31578745 + (TC)n Simple_repeat Simple_repeat 2 64 0 2 1261 633 14 0 0 chr13 88705567 88705640 -31578672 + (TG)n Simple_repeat Simple_repeat 1 74 0 2 1261 785 76 0 0 chr13 88706542 88706647 -31577665 + B1_Mus1 SINE Alu 3 107 -41 2 1261 230 111 0 53 chr13 88707111 88707168 -31577144 + A-rich Low_complexity Low_complexity 1 54 0 2 1261 238 331 113 23 chr13 88707289 88707422 -31576890 - MLT1G1 LTR MaLR -252 327 183 2 1261 216 0 0 0 chr13 88707825 88707849 -31576463 + (A)n Simple_repeat Simple_repeat 1 24 0 2 1261 43 20 0 0 chr13 88708336 88708386 -31575926 + AT_rich Low_complexity Low_complexity 1 50 0 2 1261 3386 182 3 9 chr13 88708386 88709017 -31575295 - Lx LINE L1 -12 6642 6016 2 1261 2514 123 3 0 chr13 88709017 88709399 -31574913 + Lx LINE L1 5625 6007 -990 2 1261 17325 171 88 5 chr13 88709405 88711943 -31572369 + Lx LINE L1 421 3056 -2827 2 1261 1220 89 0 11 chr13 88711943 88712124 -31572188 + (GAA)n Simple_repeat Simple_repeat 2 180 0 2 1261 17325 175 88 9 chr13 88712124 88715297 -31569015 + Lx LINE L1 3057 6648 -6 2 1261 596 57 23 0 chr13 88716711 88716799 -31567513 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 2 1261 306 202 41 41 chr13 88717052 88717150 -31567162 + MYSERV-int LTR ERVK 5372 5469 -1081 2 1261 3029 169 22 7 chr13 88717237 88717779 -31566533 + Lx LINE L1 6099 6648 -6 2 1261 306 138 0 0 chr13 88718148 88718206 -31566106 + (T)n Simple_repeat Simple_repeat 1 58 0 2 1261 738 229 42 93 chr13 88718241 88718750 -31565562 + MYSERV6-int LTR ERVK 7967 8381 -578 2 1261 564 239 22 29 chr13 88718750 88718888 -31565424 - RLTR23 LTR ERV1 -12 418 282 2 1261 1033 254 12 64 chr13 88718892 88719220 -31565092 + MYSERV6-int LTR ERVK 8383 8693 -266 2 1261 624 241 19 71 chr13 88719758 88719968 -31564344 + RLTR19-int LTR ERVK 3524 3722 -2415 2 1261 359 230 29 48 chr13 88719969 88720074 -31564238 - LSU-rRNA_Hsa rRNA rRNA -731 4304 4202 2 1261 879 227 48 48 chr13 88720191 88720422 -31563890 - RLTR23 LTR ERV1 0 430 200 2 1261 757 158 0 166 chr13 88720510 88720685 -31563627 - RLTR23 LTR ERV1 -268 162 17 2 1261 459 288 39 25 chr13 88720922 88721188 -31563124 - RLTR6-int LTR ERV1 -237 7541 7342 2 1261 1412 181 43 165 chr13 88722132 88722622 -31561690 - RLTR23 LTR ERV1 0 430 1 2 1261 604 242 72 87 chr13 88722637 88722913 -31561399 + RMER17C-int LTR ERVK 2595 2866 -372 2 1261 427 308 62 41 chr13 88722943 88723187 -31561125 + RLTR19-int LTR ERVK 4842 5090 -1460 2 1261 595 78 10 10 chr13 88723436 88723540 -31560772 + (TC)n Simple_repeat Simple_repeat 2 105 0 2 1261 1388 220 114 12 chr13 88724157 88724498 -31559814 - ORR1C1 LTR MaLR 0 378 3 2 1261 275 326 39 48 chr13 88725840 88726069 -31558243 - MMTV-int LTR ERVK -2290 4963 4737 2 1261 902 306 11 18 chr13 88726577 88726857 -31557455 + MTE2b LTR MaLR 102 379 0 2 1261 706 214 258 3 chr13 88727735 88728023 -31556289 + ORR1D1 LTR MaLR 2 362 -12 2 1261 230 227 22 11 chr13 88728696 88728785 -31555527 - L1M2 LINE L1 -2142 4001 3912 2 1261 203 139 69 0 chr13 88729353 88729425 -31554887 + T-rich Low_complexity Low_complexity 3 79 0 2 1261 308 64 0 21 chr13 88729796 88729844 -31554468 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1261 275 347 45 50 chr13 88730116 88730316 -31553996 - LTR16B LTR ERVL 0 463 265 2 1261 324 171 100 89 chr13 88730967 88731057 -31553255 + Lx9 LINE L1 2264 2354 -3493 2 1261 2146 171 93 38 chr13 88731122 88731626 -31552686 - L1_Mur1 LINE L1 -2275 3611 3080 2 1261 3697 190 24 4 chr13 88731672 88732349 -31551963 + Lx2B LINE L1 6300 6989 -11 2 1261 1587 246 66 126 chr13 88732349 88732648 -31551664 + Lx9 LINE L1 2364 2593 -3254 2 1261 1254 95 0 0 chr13 88732648 88732827 -31551485 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 2 1261 1587 246 66 126 chr13 88732827 88732886 -31551426 + Lx9 LINE L1 2594 2634 -3213 2 1261 2983 175 30 4 chr13 88732886 88733424 -31550888 + Lx3B LINE L1 6421 6972 -1 2 1261 1587 246 66 126 chr13 88733424 88734128 -31550184 + Lx9 LINE L1 2635 3363 -2484 2 1261 527 74 12 0 chr13 88734165 88734246 -31550066 + (GA)n Simple_repeat Simple_repeat 2 83 0 2 1261 951 265 18 148 chr13 88734246 88735007 -31549305 + Lx9 LINE L1 3381 4042 -1805 2 1261 1445 254 23 41 chr13 88734974 88735487 -31548825 + Lx9 LINE L1 4825 5328 -519 2 157 7909 75 4 1 chr13 88735503 88737002 -31547310 + L1_Mus1 LINE L1 5073 6654 0 2 1262 1328 274 75 89 chr13 88737027 88737795 -31546517 + Lx9 LINE L1 5327 6233 -1411 2 1262 1284 90 21 0 chr13 88737795 88737983 -31546329 + B2_Mm1a SINE B2 1 192 -1 2 1262 1328 288 98 34 chr13 88737983 88738481 -31545831 + Lx9 LINE L1 6234 6774 -870 2 1262 560 79 17 137 chr13 88738479 88738596 -31545716 - Lx2A LINE L1 -1261 5747 5645 2 1262 1957 249 27 12 chr13 88738596 88739127 -31545185 + Lx9 LINE L1 6574 7273 -371 2 1262 421 329 7 39 chr13 88739235 88739390 -31544922 - Lx5 LINE L1 -33 7017 6868 2 1262 346 20 39 0 chr13 88739391 88739442 -31544870 + (TTG)n Simple_repeat Simple_repeat 2 54 0 2 1262 1037 106 0 0 chr13 88739442 88739583 -31544729 - B1_Mus2 SINE Alu -2 145 5 2 1262 238 26 51 0 chr13 88739591 88739630 -31544682 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 2 1262 6445 58 6 0 chr13 88739630 88740443 -31543869 + L1_Mus1 LINE L1 5748 6565 -2 2 1262 267 24 0 0 chr13 88740457 88740498 -31543814 + Lx LINE L1 6609 6649 -5 2 1262 273 297 69 10 chr13 88740511 88740613 -31543699 - Lx5 LINE L1 -164 6886 6779 2 1262 509 298 80 115 chr13 88740667 88741005 -31543307 + ORR1D2 LTR MaLR 57 382 -2 3 1262 998 138 0 0 chr13 88741750 88741895 -31542417 + B1_Mus2 SINE Alu 2 146 -1 3 1262 5047 159 9 1 chr13 88742422 88743290 -31541022 + Lx2 LINE L1 4716 5590 -293 3 1262 1604 122 4 4 chr13 88743290 88743529 -31540783 + RMER17B LTR ERVK 1 239 -719 3 1262 3035 41 5 8 chr13 88743533 88743922 -31540390 - MTA_Mm LTR MaLR -8 388 1 3 1262 2466 243 27 82 chr13 88743922 88744653 -31539659 + RMER17B LTR ERVK 244 929 -29 3 1262 7611 154 71 1 chr13 88744653 88745944 -31538368 + Lx2 LINE L1 5610 6991 -6 3 1262 234 242 0 0 chr13 88745963 88746029 -31538283 + CT-rich Low_complexity Low_complexity 1 66 0 3 1262 360 179 0 0 chr13 88746037 88746115 -31538197 + (TG)n Simple_repeat Simple_repeat 1 78 0 3 1262 438 306 82 41 chr13 88746228 88746422 -31537890 - B4A SINE B4 -76 216 15 3 1262 21 57 0 0 chr13 88746860 88746895 -31537417 + AT_rich Low_complexity Low_complexity 1 35 0 3 1262 420 122 0 0 chr13 88746921 88747003 -31537309 + (A)n Simple_repeat Simple_repeat 1 82 0 3 1262 3797 16 0 0 chr13 88747897 88748339 -31535973 - L1_Mm LINE L1 -343 5540 5099 3 1262 8394 36 0 0 chr13 88748360 88749356 -31534956 + L1Md_T LINE L1 5587 6582 0 3 1262 220 244 46 58 chr13 88749410 88749497 -31534815 - B4 SINE B4 -203 89 4 3 1262 253 405 0 0 chr13 88749524 88749608 -31534704 - PB1D10 SINE Alu -33 84 1 3 1262 265 64 42 21 chr13 88750690 88750738 -31533574 + (GGGAGA)n Simple_repeat Simple_repeat 6 54 0 3 1262 360 0 0 0 chr13 88751502 88751542 -31532770 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1262 210 26 24 49 chr13 88751615 88751656 -31532656 + (TTATA)n Simple_repeat Simple_repeat 5 44 0 3 1262 46 68 0 0 chr13 88751670 88751758 -31532554 + AT_rich Low_complexity Low_complexity 1 88 0 3 1262 204 86 0 54 chr13 88751875 88751912 -31532400 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1262 780 163 8 8 chr13 88752439 88752569 -31531743 - RLTR13D3 LTR ERVK 0 1114 985 3 1262 3233 94 42 0 chr13 88752562 88753019 -31531293 - RLTR13D3 LTR ERVK -638 476 1 3 1262 309 234 128 20 chr13 88753635 88753783 -31530529 - Lx9 LINE L1 -53 7591 7428 3 1262 309 406 7 18 chr13 88754331 88754607 -31529705 - B4A SINE B4 -18 274 2 3 1262 265 261 86 0 chr13 88754972 88755145 -31529167 + L1MB3 LINE L1 5773 5965 -218 3 1262 257 286 43 106 chr13 88755366 88755507 -31528805 + B4A SINE B4 14 145 -147 3 1262 25 0 0 0 chr13 88755659 88755684 -31528628 + AT_rich Low_complexity Low_complexity 1 25 0 3 1262 35 83 0 0 chr13 88755748 88755832 -31528480 + AT_rich Low_complexity Low_complexity 1 84 0 3 1262 679 282 37 5 chr13 88755840 88756029 -31528283 - B3 SINE B2 -19 197 3 3 1262 1352 237 127 25 chr13 88756045 88756534 -31527778 + Lx9 LINE L1 7098 7636 -8 3 1262 1522 169 23 0 chr13 88756916 88757176 -31527136 - L1_Mm LINE L1 -367 5516 5251 3 1262 2980 146 43 8 chr13 88757168 88757685 -31526627 + Lx2A LINE L1 6442 6976 -32 3 1262 461 95 0 13 chr13 88757685 88757760 -31526552 + Lx2A LINE L1 6931 7004 -4 3 1262 21 0 0 0 chr13 88757826 88757847 -31526465 + AT_rich Low_complexity Low_complexity 1 21 0 3 1262 477 0 0 0 chr13 88758504 88758557 -31525755 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1262 1919 162 7 3 chr13 88759419 88759729 -31524583 + RLTR10E LTR ERVK 1 311 0 3 1262 370 323 69 32 chr13 88759968 88760403 -31523909 + L1M3f LINE L1 778 1228 -4100 3 1262 356 233 27 27 chr13 88760572 88760647 -31523665 + B3A SINE B2 26 100 -98 3 1262 794 26 34 0 chr13 88760691 88760808 -31523504 + (TC)n Simple_repeat Simple_repeat 1 121 0 3 1262 243 0 0 0 chr13 88760808 88760834 -31523478 + (CA)n Simple_repeat Simple_repeat 1 27 0 3 1262 1165 240 47 73 chr13 88762144 88763013 -31521299 + L1_Mur3 LINE L1 807 1651 -4226 3 1262 9962 173 16 44 chr13 88762987 88765166 -31519146 + L1_Mur3 LINE L1 2224 4342 -1535 3 1262 1917 226 54 11 chr13 88765149 88765627 -31518685 + Lx5 LINE L1 5730 6228 -822 3 1262 524 285 36 154 chr13 88765675 88766145 -31518167 + RMER20B LTR ERVK 64 522 -105 3 1262 194 0 39 0 chr13 88766173 88766199 -31518113 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1262 4031 176 59 8 chr13 88766320 88767084 -31517228 + RLTR25A LTR ERVK 48 850 -253 3 1262 7830 162 26 7 chr13 88767257 88767930 -31516382 - Lx2 LINE L1 -9 6988 6305 3 1262 2203 139 172 0 chr13 88767930 88768384 -31515928 - RLTR47_MM LTR ERV1 0 532 1 3 1262 7830 166 24 6 chr13 88768384 88769212 -31515100 - Lx2 LINE L1 -693 6304 5463 3 1262 8276 138 46 8 chr13 88769204 88770130 -31514182 - MusHAL1 LINE L1 -1104 2249 1269 3 1262 302 0 26 0 chr13 88770130 88770168 -31514144 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 3 1262 8276 137 42 14 chr13 88770168 88770878 -31513434 - MusHAL1 LINE L1 -2085 1268 548 3 1262 22127 166 44 4 chr13 88770886 88775980 -31508332 - L1_Mus1 LINE L1 0 6567 1251 3 1262 207 0 0 0 chr13 88775980 88776003 -31508309 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1262 22127 192 86 135 chr13 88776003 88777059 -31507253 - L1_Mus1 LINE L1 -5384 1250 317 3 1262 1654 204 27 11 chr13 88777052 88777418 -31506894 - L1VL4 LINE L1 -5527 775 404 3 1262 1784 148 43 136 chr13 88777646 88778109 -31506203 + RLTR23 LTR ERV1 11 430 0 3 1262 293 198 73 214 chr13 88778181 88778387 -31505925 + RLTR25B LTR ERVK 742 918 -110 3 1262 279 0 0 0 chr13 88778388 88778419 -31505893 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1262 633 27 0 0 chr13 88778419 88778493 -31505819 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 1262 541 254 104 7 chr13 88778533 88778704 -31505608 + MTC LTR MaLR 1 178 -229 3 1262 765 118 0 0 chr13 88778705 88778824 -31505488 + (TTCC)n Simple_repeat Simple_repeat 3 121 0 3 1262 1146 105 0 0 chr13 88778837 88779009 -31505303 + (TTTC)n Simple_repeat Simple_repeat 4 175 0 3 1262 1156 340 89 17 chr13 88779062 88779598 -31504714 - Lx6 LINE L1 -59 7401 6848 3 1262 702 349 68 49 chr13 88779607 88780240 -31504072 + Lx8 LINE L1 6702 7346 -127 3 1262 250 210 32 0 chr13 88780439 88780501 -31503811 + L1MA6 LINE L1 5899 5962 -338 3 1262 1739 175 102 195 chr13 88780589 88781234 -31503078 - RMER4B LTR ERVK 0 585 1 3 1262 243 88 0 0 chr13 88781271 88781305 -31503007 + (GA)n Simple_repeat Simple_repeat 1 34 0 3 1262 297 75 0 0 chr13 88781306 88781346 -31502966 + (ATG)n Simple_repeat Simple_repeat 3 42 0 3 1262 865 0 0 19 chr13 88781373 88781480 -31502832 + (GAA)n Simple_repeat Simple_repeat 2 106 0 3 1262 293 238 0 0 chr13 88782071 88782134 -31502178 + Lx7 LINE L1 5687 5749 -1947 3 1262 7429 147 27 3 chr13 88782242 88784366 -31499946 - Lx LINE L1 0 6654 4474 3 1262 25 31 0 0 chr13 88784398 88784430 -31499882 + AT_rich Low_complexity Low_complexity 1 32 0 3 1262 3106 58 5 2 chr13 88784775 88785170 -31499142 - MTA_Mm LTR MaLR 0 396 1 3 1262 2030 155 12 0 chr13 88785709 88786032 -31498280 + ORR1A2 LTR MaLR 1 327 0 3 1262 8877 155 27 68 chr13 88786033 88787831 -31496481 + ORR1A2-int LTR MaLR 2 1723 -69 3 1262 365 0 0 22 chr13 88787831 88787877 -31496435 + (TTA)n Simple_repeat Simple_repeat 3 47 0 3 1262 8877 155 27 68 chr13 88787877 88787936 -31496376 + ORR1A2-int LTR MaLR 1724 1782 -10 3 1262 4320 101 22 3 chr13 88788386 88789013 -31495299 + Lx3_Mus LINE L1 6361 6999 -10 3 1262 185 250 0 0 chr13 88790703 88790747 -31493565 - MIRc SINE MIR -32 236 193 3 1262 262 282 14 182 chr13 88791832 88791975 -31492337 + MLT2B2 LTR ERVL 9 127 -388 3 1262 465 19 0 0 chr13 88791977 88792031 -31492281 + (CAAAA)n Simple_repeat Simple_repeat 4 57 0 3 1262 231 167 24 60 chr13 88792116 88792199 -31492113 + (TTTG)n Simple_repeat Simple_repeat 2 81 0 3 1262 229 253 76 0 chr13 88792812 88792891 -31491421 + MLT2B2 LTR ERVL 474 558 -4 3 1262 546 16 0 0 chr13 88793104 88793167 -31491145 + (TC)n Simple_repeat Simple_repeat 2 64 0 3 1262 22 0 0 0 chr13 88793287 88793309 -31491003 + AT_rich Low_complexity Low_complexity 1 22 0 3 1262 5015 67 3 11 chr13 88793565 88794169 -31490143 + L1_Mus3 LINE L1 5983 6588 -50 3 1262 2092 38 114 0 chr13 88794169 88794431 -31489881 - RLTR10B LTR ERVK 0 292 1 3 1262 5015 67 3 11 chr13 88794431 88794486 -31489826 + L1_Mus3 LINE L1 6589 6637 -1 3 1262 649 261 161 5 chr13 88794647 88794870 -31489442 - Lx7 LINE L1 -350 7346 7089 3 1262 988 203 73 66 chr13 88794870 88795144 -31489168 + RLTR19 LTR ERVK 3 278 -221 3 1262 248 91 23 0 chr13 88795154 88795198 -31489114 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1262 469 325 58 0 chr13 88795204 88795358 -31488954 + RLTR19 LTR ERVK 337 499 0 3 1262 2816 261 50 9 chr13 88795358 88796097 -31488215 - Lx7 LINE L1 -602 7094 6326 3 1262 240 273 30 0 chr13 88796384 88796450 -31487862 - MTEb LTR MaLR -18 361 294 3 1262 202 217 32 32 chr13 88796554 88796616 -31487696 + GA-rich Low_complexity Low_complexity 6 67 0 3 1262 3459 58 0 0 chr13 88797017 88797451 -31486861 - RLTR1C LTR ERV1 -69 434 1 3 1262 369 323 63 0 chr13 88798507 88798634 -31485678 - ID_B1 SINE B4 -6 218 84 3 1262 661 283 81 89 chr13 88798660 88798949 -31485363 - L1MA8 LINE L1 -3 6288 6001 3 1262 1119 75 0 0 chr13 88798949 88799096 -31485216 - B1_Mus2 SINE Alu 0 147 1 3 1262 661 283 81 89 chr13 88799096 88799348 -31484964 - L1MA8 LINE L1 -291 6000 5751 3 1262 594 335 6 58 chr13 88799790 88799964 -31484348 - RSINE1 SINE B4 0 165 1 3 1262 377 329 40 27 chr13 88800465 88800615 -31483697 + B3 SINE B2 31 182 -34 3 1262 261 70 17 34 chr13 88801655 88801714 -31482598 + (TTTTTG)n Simple_repeat Simple_repeat 4 61 0 3 1262 301 304 52 81 chr13 88802407 88802543 -31481769 + B3A SINE B2 9 140 -58 3 1262 523 194 48 72 chr13 88803365 88803532 -31480780 - RLTR43A LTR ERVK 0 364 202 3 1262 1768 261 32 9 chr13 88803690 88804130 -31480182 - ETnERV2-int LTR ERVK -311 7095 6646 3 1262 955 194 24 0 chr13 88805399 88805569 -31478743 - ETnERV2-int LTR ERVK -1424 3982 3809 3 1262 203 61 30 0 chr13 88805569 88805602 -31478710 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 3 1262 2344 196 16 6 chr13 88805626 88806128 -31478184 - ETnERV2-int LTR ERVK -1613 5793 5337 3 1262 9514 21 1 1 chr13 88806135 88807932 -31476380 - L1Md_T LINE L1 0 6582 4785 3 1262 5111 34 3 0 chr13 88807932 88808559 -31475753 + L1Md_T LINE L1 4144 4772 -1111 3 1262 1021 186 70 10 chr13 88808565 88808766 -31475546 - ETnERV2-int LTR ERVK -2069 5337 5125 3 1262 2232 260 22 11 chr13 88808825 88809538 -31474774 - ETnERV2-int LTR ERVK -2873 4533 4083 3 1262 1871 176 42 33 chr13 88809557 88809987 -31474325 - ETnERV2-int LTR ERVK -2567 2839 2452 3 1262 1115 81 0 7 chr13 88809987 88810136 -31474176 - B1_Mus1 SINE Alu 0 148 1 3 1262 1831 194 67 110 chr13 88810136 88810331 -31473981 - ETnERV2-int LTR ERVK -3892 3514 3299 3 1262 4979 179 24 46 chr13 88810332 88811045 -31473267 - ETnERV2-int LTR ERVK -4660 2746 2053 3 1262 3565 28 12 0 chr13 88811045 88811470 -31472842 + L1Md_F3 LINE L1 6140 6569 -15 3 1262 4979 179 24 46 chr13 88811470 88811813 -31472499 - ETnERV2-int LTR ERVK -5354 2052 1714 3 1262 2219 161 142 42 chr13 88811817 88812323 -31471989 - ETnERV2-int LTR ERVK -4587 819 263 3 1262 486 0 0 0 chr13 88812323 88812377 -31471935 + (TC)n Simple_repeat Simple_repeat 1 54 0 4 1262 301 70 35 0 chr13 88812606 88812663 -31471649 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 4 1262 21 36 0 0 chr13 88812671 88812699 -31471613 + AT_rich Low_complexity Low_complexity 1 28 0 4 1262 911 352 119 31 chr13 88812914 88813462 -31470850 + MLT1E3 LTR MaLR 27 622 -2 4 1262 21 57 0 0 chr13 88814124 88814159 -31470153 + AT_rich Low_complexity Low_complexity 1 35 0 4 1262 262 359 15 38 chr13 88814347 88814480 -31469832 - B1F SINE Alu -15 134 5 4 1262 204 189 68 0 chr13 88814659 88814733 -31469579 + (TA)n Simple_repeat Simple_repeat 1 79 0 4 1262 224 0 65 0 chr13 88815085 88815116 -31469196 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 4 1262 748 268 5 10 chr13 88815186 88815382 -31468930 + Lx6 LINE L1 7265 7459 -1 4 1262 217 255 0 18 chr13 88815444 88815500 -31468812 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1262 188 400 56 5 chr13 88815806 88816022 -31468290 - L2 LINE L2 -1098 2321 2095 4 1262 726 315 84 20 chr13 88816055 88816398 -31467914 - MLT1A0 LTR MaLR 0 365 1 4 1262 221 300 172 53 chr13 88816398 88816683 -31467629 - L2 LINE L2 -1356 2063 1745 4 1262 253 378 0 0 chr13 88816700 88816774 -31467538 - ID4_ SINE ID -3 80 7 4 1262 185 383 56 0 chr13 88816908 88817015 -31467297 - L2 LINE L2 -1806 1613 1501 4 1262 3312 179 39 30 chr13 88817036 88817749 -31466563 - RMER6D LTR ERVK 0 720 1 4 1262 183 204 21 83 chr13 88818052 88818100 -31466212 - L4 LINE RTE -396 1633 1589 4 1262 182 37 37 0 chr13 88818531 88818558 -31465754 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 4 1262 222 284 0 63 chr13 88818825 88818904 -31465408 + CT-rich Low_complexity Low_complexity 1 74 0 4 1262 24 0 0 0 chr13 88819279 88819303 -31465009 + AT_rich Low_complexity Low_complexity 1 24 0 4 1262 341 334 197 21 chr13 88819303 88819491 -31464821 + ID_B1 SINE B4 2 222 -2 4 1262 2694 188 165 20 chr13 88819707 88820314 -31463998 + RMER13B LTR ERVK 1 695 -213 4 1262 5972 65 3 0 chr13 88820411 88821175 -31463137 - L1Md_F2 LINE L1 -139 5744 4979 4 1262 6575 60 7 0 chr13 88821176 88822012 -31462300 + L1Md_F2 LINE L1 5741 6582 0 4 1262 264 330 108 16 chr13 88823043 88823237 -31461075 - Tigger7 DNA MER2_type -9 2482 2271 4 1262 253 383 19 0 chr13 88823231 88823338 -31460974 - Tigger7 DNA MER2_type -2374 117 9 4 1262 41 66 0 0 chr13 88823444 88823520 -31460792 + AT_rich Low_complexity Low_complexity 1 76 0 4 1262 210 37 0 0 chr13 88824327 88824354 -31459958 + (TTG)n Simple_repeat Simple_repeat 1 27 0 4 1262 5399 138 24 0 chr13 88824519 88825384 -31458928 - Lx3B LINE L1 -5 6968 6083 4 1262 22 35 0 0 chr13 88825761 88825790 -31458522 + AT_rich Low_complexity Low_complexity 1 29 0 4 1262 228 135 0 0 chr13 88826071 88826108 -31458204 + (TCC)n Simple_repeat Simple_repeat 3 39 0 4 1262 712 274 75 66 chr13 88826621 88826964 -31457348 + ORR1D2 LTR MaLR 1 361 -18 4 1262 200 189 42 42 chr13 88827809 88827881 -31456431 + (ATAAG)n Simple_repeat Simple_repeat 3 74 0 4 1262 315 315 8 8 chr13 88828265 88828393 -31455919 - L1_Mur3 LINE L1 -1061 4819 4692 4 1262 619 165 50 1 chr13 88828500 88828615 -31455697 + Lx3B LINE L1 6337 6451 -557 4 1262 256 278 0 0 chr13 88828657 88828729 -31455583 + A-rich Low_complexity Low_complexity 1 72 0 4 1262 307 365 29 46 chr13 88829219 88829394 -31454918 + L1MEg LINE L1 242 413 -5671 4 1262 461 338 46 5 chr13 88829645 88829841 -31454471 - RMER15 LTR ERVL -13 562 359 4 1262 31 0 0 0 chr13 88829886 88829917 -31454395 + AT_rich Low_complexity Low_complexity 1 31 0 4 1262 618 60 0 0 chr13 88831030 88831113 -31453199 + (TG)n Simple_repeat Simple_repeat 2 84 0 4 1262 234 337 56 11 chr13 88831205 88831295 -31453017 + B3A SINE B2 89 182 -16 4 1262 645 352 28 23 chr13 88831376 88831591 -31452721 - B3A SINE B2 0 216 1 4 1262 431 242 21 21 chr13 88831712 88831805 -31452507 - B3A SINE B2 -105 93 1 4 1262 30 45 0 0 chr13 88831850 88831894 -31452418 + AT_rich Low_complexity Low_complexity 1 44 0 4 1262 236 200 138 0 chr13 88831982 88832047 -31452265 - L1MA6 LINE L1 -7 6293 6220 4 1262 201 176 0 0 chr13 88832047 88832081 -31452231 + (TA)n Simple_repeat Simple_repeat 1 34 0 4 1262 1096 311 95 43 chr13 88833094 88833517 -31450795 - LTR40a LTR ERVL -58 461 17 4 1262 1101 99 132 0 chr13 88834125 88834307 -31450005 + L1Md_F2 LINE L1 6377 6582 0 4 1262 34 0 0 0 chr13 88834438 88834472 -31449840 + AT_rich Low_complexity Low_complexity 1 34 0 4 1262 31 0 0 0 chr13 88835192 88835223 -31449089 + AT_rich Low_complexity Low_complexity 1 31 0 4 1262 261 308 13 0 chr13 88836416 88836494 -31447818 - ID4_ SINE ID 0 83 5 4 1262 342 377 70 45 chr13 88836575 88836817 -31447495 - MER70B LTR ERVL -5 573 326 4 1262 2502 214 29 12 chr13 88837391 88837906 -31446406 - RLTR12B LTR ERVK -4 524 1 4 1262 548 43 22 0 chr13 88838164 88838249 -31446063 - B1_Mm SINE Alu -1 148 59 4 1262 5937 92 0 2 chr13 88838409 88839225 -31445087 + L1_Mus1 LINE L1 5754 6567 0 4 1262 817 232 47 37 chr13 88839320 88839535 -31444777 + MT2A LTR ERVL 3 219 -314 4 1262 1325 181 87 4 chr13 88839541 88839818 -31444494 + ORR1C2 LTR MaLR 40 339 -45 4 1262 1172 290 90 44 chr13 88839950 88840530 -31443782 - RLTR18B LTR ERVK -3 613 1 4 1262 342 0 0 0 chr13 88840690 88840728 -31443584 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1262 278 180 16 0 chr13 88841398 88841459 -31442853 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 4 1262 345 391 14 5 chr13 88841603 88841811 -31442501 - LTR40b LTR ERVL -250 212 3 4 1262 233 91 45 0 chr13 88842530 88842574 -31441738 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 4 1262 1078 83 0 7 chr13 88842575 88842721 -31441591 - B1_Mus2 SINE Alu -1 146 2 4 1262 303 324 0 0 chr13 88842729 88842803 -31441509 - B1_Mur4 SINE Alu -60 90 17 4 1262 255 296 50 57 chr13 88843171 88843311 -31441001 + MIR SINE MIR 123 261 -1 4 1262 225 0 0 0 chr13 88844476 88844501 -31439811 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1262 24 0 0 0 chr13 88845043 88845067 -31439245 + AT_rich Low_complexity Low_complexity 1 24 0 4 1262 462 219 8 47 chr13 88845143 88845272 -31439040 + ORR1D1 LTR MaLR 1 124 -250 4 1262 21 0 0 0 chr13 88845507 88845528 -31438784 + AT_rich Low_complexity Low_complexity 1 21 0 4 1262 24 0 0 0 chr13 88845539 88845563 -31438749 + AT_rich Low_complexity Low_complexity 1 24 0 4 1262 25 31 0 0 chr13 88846004 88846036 -31438276 + AT_rich Low_complexity Low_complexity 1 32 0 4 1262 1298 73 6 0 chr13 88846221 88846400 -31437912 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1262 894 88 0 0 chr13 88846400 88846525 -31437787 + (TC)n Simple_repeat Simple_repeat 2 126 0 4 1262 697 247 7 0 chr13 88846537 88846683 -31437629 - B1_Mus2 SINE Alu 0 147 1 4 1262 1119 287 106 29 chr13 88847073 88847528 -31436784 + MLT1E LTR MaLR 72 561 -92 4 1262 253 338 0 0 chr13 88847862 88847936 -31436376 + B4A SINE B4 7 80 -212 4 1262 2645 160 70 25 chr13 88848190 88848715 -31435597 - Lx2B LINE L1 -3 6997 6449 4 1262 333 47 0 0 chr13 88848713 88848756 -31435556 + L1_Mm LINE L1 4533 4575 -1308 4 1262 274 350 0 24 chr13 88848851 88848974 -31435338 + B4A SINE B4 167 286 -6 4 1262 306 0 0 0 chr13 88849020 88849054 -31435258 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1262 22 35 0 0 chr13 88849602 88849631 -31434681 + AT_rich Low_complexity Low_complexity 1 29 0 4 1262 2572 166 17 0 chr13 88850128 88850683 -31433629 + Lx3C LINE L1 5408 5966 -1010 4 1262 3974 198 61 19 chr13 88850683 88851521 -31432791 + RMER13B LTR ERVK 1 873 -35 4 1262 2183 195 161 12 chr13 88851522 88852405 -31431907 + Lx3C LINE L1 5959 6972 -4 4 1262 202 274 0 0 chr13 88852414 88852465 -31431847 + GA-rich Low_complexity Low_complexity 3 53 0 4 1262 213 316 34 42 chr13 88852682 88852801 -31431511 + MIR SINE MIR 132 249 -13 4 1262 3101 163 35 2 chr13 88853045 88853612 -31430700 + RLTR25A LTR ERVK 160 745 -358 4 1262 5954 153 12 7 chr13 88853613 88854622 -31429690 + Lx LINE L1 5634 6647 -7 4 1262 488 140 65 0 chr13 88854624 88854717 -31429595 + RLTR25A LTR ERVK 668 766 -262 4 1262 751 172 16 0 chr13 88854729 88854857 -31429455 + RLTR25A LTR ERVK 974 1103 0 4 1262 1606 245 18 0 chr13 88855554 88855937 -31428375 - ORR1B1 LTR MaLR -4 390 1 4 1262 273 346 168 0 chr13 88856500 88856607 -31427705 + B1F1 SINE Alu 5 129 -20 4 1262 438 374 34 0 chr13 88857842 88857989 -31426323 - RSINE1 SINE B4 0 165 14 4 1262 379 316 82 82 chr13 88858139 88858384 -31425928 + MLT1D LTR MaLR 261 505 0 4 1262 259 235 37 0 chr13 88858761 88858842 -31425470 + Lx9 LINE L1 7546 7629 -15 4 1262 2674 96 25 5 chr13 88859004 88859403 -31424909 + L1_Mus3 LINE L1 6232 6638 0 4 1262 6965 99 16 34 chr13 88859698 88859838 -31424474 + MusHAL1 LINE L1 672 800 -1912 4 1262 8036 11 0 0 chr13 88859838 88860743 -31423569 + L1Md_T LINE L1 5678 6582 0 4 1262 6965 99 16 34 chr13 88860743 88861217 -31423095 + MusHAL1 LINE L1 801 1258 -1454 4 1262 265 43 65 0 chr13 88861217 88861263 -31423049 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 4 1262 6965 99 16 34 chr13 88861263 88861807 -31422505 + MusHAL1 LINE L1 1259 1810 -902 4 1262 23 33 0 0 chr13 88861916 88861946 -31422366 + AT_rich Low_complexity Low_complexity 1 30 0 4 1262 198 0 0 0 chr13 88861946 88861968 -31422344 + (TG)n Simple_repeat Simple_repeat 1 22 0 4 1262 369 0 0 0 chr13 88861968 88862008 -31422304 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1262 4309 169 75 14 chr13 88862183 88862987 -31421325 + RMER19B LTR ERVK 48 900 -2 4 1262 851 246 67 72 chr13 88863022 88863408 -31420904 - Lx9 LINE L1 -4 7640 7257 4 1262 316 279 148 44 chr13 88863559 88863694 -31420618 + HAL1-3A_ME LINE L1 1980 2128 -730 4 1262 543 307 108 39 chr13 88864978 88865647 -31418665 - L1MA4A LINE L1 -401 5902 5138 4 157 14243 128 20 7 chr13 88865782 88867346 -31416966 + L1VL4 LINE L1 86 1685 -1874 4 1263 1072 122 0 0 chr13 88867346 88867493 -31416819 + B1_Mus2 SINE Alu 1 147 0 5 1263 14243 100 32 4 chr13 88867493 88868942 -31415370 + L1VL4 LINE L1 1686 3159 -400 4 1263 4531 117 39 60 chr13 88868942 88869848 -31414464 - RLTR13C2 LTR ERVK -49 1065 1 5 1263 10156 172 18 1 chr13 88869875 88870524 -31413788 + L1_Mus4 LINE L1 3976 4627 -1256 5 1263 428 0 0 19 chr13 88870524 88870577 -31413735 + (TAA)n Simple_repeat Simple_repeat 2 53 0 5 1263 10156 137 21 1 chr13 88870577 88872534 -31411778 + L1_Mus4 LINE L1 4628 6636 0 5 1263 326 319 109 49 chr13 88872685 88872863 -31411449 - Lx8 LINE L1 -627 6846 6667 5 1263 957 18 0 0 chr13 88872863 88872974 -31411338 + (TTC)n Simple_repeat Simple_repeat 2 112 0 5 1263 326 319 109 49 chr13 88872974 88873079 -31411233 - Lx8 LINE L1 -807 6666 6547 5 1263 500 340 52 8 chr13 88873082 88873331 -31410981 + Lx8 LINE L1 6842 7101 -372 5 1263 969 125 0 0 chr13 88874779 88874931 -31409381 + (TTCC)n Simple_repeat Simple_repeat 1 152 0 5 1263 5226 195 128 23 chr13 88874933 88875851 -31408461 - Lx3A LINE L1 -18 6963 5909 5 1263 468 0 0 0 chr13 88875851 88875903 -31408409 + (GTTTG)n Simple_repeat Simple_repeat 2 53 0 5 1263 5905 144 20 30 chr13 88875903 88877006 -31407306 - Lx3A LINE L1 -1073 5908 4822 5 1263 2365 137 10 20 chr13 88877005 88877245 -31407067 - L1_Mm LINE L1 -817 5066 4828 5 1263 1081 105 23 12 chr13 88877245 88877418 -31406894 + L1Md_F2 LINE L1 6403 6577 -5 5 1263 2365 137 10 20 chr13 88877418 88877579 -31406733 - L1_Mm LINE L1 -1056 4827 4669 5 1263 524 119 303 0 chr13 88877551 88877660 -31406652 - Lx3A LINE L1 -1446 4431 4290 5 1263 743 294 80 21 chr13 88878061 88878396 -31405916 + ORR1E LTR MaLR 1 378 -1 5 1263 6116 48 0 0 chr13 88879001 88879737 -31404575 - L1_Mus1 LINE L1 -93 6474 5739 5 1263 542 71 36 0 chr13 88879737 88879821 -31404491 + L1_Mus1 LINE L1 6480 6566 -1 5 1263 288 53 0 0 chr13 88879840 88879878 -31404434 + (CAA)n Simple_repeat Simple_repeat 2 39 0 5 1263 2131 188 83 11 chr13 88879959 88880416 -31403896 + RMER1B Other Other 574 1063 -3 5 1263 592 190 22 7 chr13 88880431 88880569 -31403743 + Lx3C LINE L1 6835 6974 -2 5 1263 1083 188 13 59 chr13 88880661 88880713 -31403599 + Lx4A LINE L1 6722 6765 -293 5 1263 204 125 0 0 chr13 88880713 88880745 -31403567 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1263 1083 204 27 48 chr13 88880745 88880988 -31403324 + Lx4A LINE L1 6766 7051 -7 5 1263 1777 154 41 0 chr13 88881246 88881564 -31402748 - L1_Mur2 LINE L1 -1534 4343 4013 5 1263 261 0 0 0 chr13 88882419 88882448 -31401864 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1263 342 0 0 0 chr13 88882812 88882850 -31401462 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 5 1263 1154 82 0 0 chr13 88882855 88883002 -31401310 - B1_Mm SINE Alu 0 147 1 5 1263 18378 143 9 43 chr13 88884174 88885640 -31398672 - L1_Mm LINE L1 -664 5219 3751 5 1263 180 0 0 0 chr13 88885640 88885660 -31398652 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1263 967 96 29 0 chr13 88885660 88885796 -31398516 - B1_Mm SINE Alu -7 140 1 5 1263 18378 143 9 43 chr13 88885796 88886370 -31397942 - L1_Mm LINE L1 -2133 3750 3183 5 1263 417 86 0 0 chr13 88886370 88886428 -31397884 + (TAAA)n Simple_repeat Simple_repeat 2 59 0 5 1263 18378 143 9 43 chr13 88886428 88887784 -31396528 - L1_Mm LINE L1 -2701 3182 1940 5 1263 4960 137 12 42 chr13 88887779 88888744 -31395568 - L1VL1 LINE L1 -2549 1149 221 5 1263 182 402 10 10 chr13 88889632 88889730 -31394582 + MIR3 SINE MIR 7 104 -104 5 1263 297 282 141 78 chr13 88891304 88891496 -31392816 - MLT2B4 LTR ERVL -4 552 349 5 1263 571 356 41 25 chr13 88891836 88892153 -31392159 + MLT1D LTR MaLR 114 435 -70 5 1263 513 360 26 96 chr13 88892166 88892443 -31391869 + B4A SINE B4 2 268 -24 5 1263 294 29 0 0 chr13 88892443 88892478 -31391834 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1263 513 360 26 96 chr13 88892478 88892513 -31391799 + B4A SINE B4 269 292 0 5 1263 250 304 64 64 chr13 88893668 88893886 -31390426 - L1MA8 LINE L1 -112 6188 5971 5 1263 340 346 73 16 chr13 88894098 88894401 -31389911 - L1MA8 LINE L1 -327 5964 5645 5 1263 23 0 0 0 chr13 88895340 88895363 -31388949 + AT_rich Low_complexity Low_complexity 1 23 0 5 1263 363 121 0 0 chr13 88895595 88895653 -31388659 + (TA)n Simple_repeat Simple_repeat 1 58 0 5 1263 211 224 0 43 chr13 88895992 88896062 -31388250 + A-rich Low_complexity Low_complexity 4 70 0 5 1263 337 309 8 53 chr13 88896083 88896216 -31388096 + B3A SINE B2 1 127 -71 5 1263 847 300 30 36 chr13 88896230 88896534 -31387778 - Lx7 LINE L1 -447 7249 6948 5 1263 2064 118 13 10 chr13 88896534 88896842 -31387470 - RLTR27 LTR ERVK 0 309 1 5 1263 1529 157 0 22 chr13 88896842 88897109 -31387203 - MMERVK10C-int LTR ERVK 0 7581 7321 5 1263 323 331 18 24 chr13 88897243 88897407 -31386905 - MMERVK10C-int LTR ERVK -512 7069 6907 5 1263 2948 303 40 42 chr13 88897625 88899516 -31384796 - MMERVK10C-int LTR ERVK -2104 5477 3258 5 1263 200 167 0 20 chr13 88899519 88899568 -31384744 + T-rich Low_complexity Low_complexity 2 49 0 5 1263 255 235 0 56 chr13 88899744 88899816 -31384496 + CT-rich Low_complexity Low_complexity 3 70 0 5 1263 622 250 87 0 chr13 88899819 88900003 -31384309 - RLTR10-int LTR ERVK -1133 854 655 5 1263 334 76 8 11 chr13 88900044 88900094 -31384218 - RLTR10-int LTR ERVK -7317 264 224 5 1263 254 170 19 19 chr13 88900065 88900119 -31384193 - RLTR10-int LTR ERVK -1633 354 301 5 1263 1979 112 19 13 chr13 88900119 88900426 -31383886 - RLTR27 LTR ERVK 0 309 1 5 1263 198 103 0 0 chr13 88900439 88900468 -31383844 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1263 2337 292 53 35 chr13 88900468 88901372 -31382940 - Lx7 LINE L1 -759 6937 6018 5 1263 1623 287 186 20 chr13 88901382 88902142 -31382170 - L1_Mur3 LINE L1 -571 5309 4378 5 1263 576 29 0 0 chr13 88902142 88902212 -31382100 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 1263 1623 287 186 20 chr13 88902212 88902819 -31381493 - L1_Mur3 LINE L1 -1503 4377 3716 5 1263 4797 252 57 26 chr13 88902881 88903561 -31380751 - Lx6 LINE L1 -10 7450 6747 5 1263 411 21 0 0 chr13 88903561 88903609 -31380703 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1263 4797 252 57 26 chr13 88903609 88903651 -31380661 - Lx6 LINE L1 -714 6746 6705 5 1263 1488 38 16 0 chr13 88903651 88903834 -31380478 - B2_Mm1t SINE B2 -6 187 2 5 1263 4797 252 57 26 chr13 88903834 88904349 -31379963 - Lx6 LINE L1 -756 6704 6174 5 1263 294 313 0 0 chr13 88904807 88904874 -31379438 + ID4 SINE ID 12 78 -5 5 1263 680 324 22 22 chr13 88904988 88905212 -31379100 + MTD LTR MaLR 2 225 -194 5 1263 1039 265 30 50 chr13 88905212 88905514 -31378798 + Lx5 LINE L1 6511 6806 -244 5 1263 2405 151 122 48 chr13 88905515 88906754 -31377558 - L1_Mur1 LINE L1 -4300 1586 3 5 1263 1498 154 153 94 chr13 88906754 88907092 -31377220 - RMER6C LTR ERVK -205 485 173 5 1263 450 0 0 0 chr13 88907092 88907142 -31377170 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 5 1263 1498 154 153 94 chr13 88907142 88907261 -31377051 - RMER6C LTR ERVK -518 172 3 5 1263 1087 76 14 20 chr13 88907274 88907422 -31376890 - B1_Mm SINE Alu 0 147 1 5 1263 964 273 33 86 chr13 88908405 88908680 -31375632 - RMER17C LTR ERVK -34 376 123 5 1263 1026 100 0 0 chr13 88908680 88908860 -31375452 + (GA)n Simple_repeat Simple_repeat 1 180 0 5 1263 964 273 33 86 chr13 88908860 88908981 -31375331 - RMER17C LTR ERVK -288 122 1 5 1263 23 0 0 0 chr13 88909049 88909072 -31375240 + AT_rich Low_complexity Low_complexity 1 23 0 5 1263 207 139 0 0 chr13 88909530 88909566 -31374746 + (TTC)n Simple_repeat Simple_repeat 1 36 0 5 1263 431 287 115 0 chr13 88909574 88909696 -31374616 - B1F2 SINE Alu -8 141 6 5 1263 1133 155 0 5 chr13 88909737 88909925 -31374387 - B2_Mm2 SINE B2 -8 187 1 5 1263 1502 95 0 0 chr13 88910197 88910397 -31373915 + L1_Mus1 LINE L1 6051 6250 -317 5 1263 7682 65 14 9 chr13 88910395 88910457 -31373855 - L1_Mm LINE L1 -576 5307 5234 5 1263 384 22 0 0 chr13 88910457 88910502 -31373810 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 1263 315 0 0 0 chr13 88910502 88910536 -31373776 + (TA)n Simple_repeat Simple_repeat 2 36 0 5 1263 7682 65 14 9 chr13 88910536 88911147 -31373165 - L1_Mm LINE L1 -650 5233 4628 5 1263 7375 10 5 0 chr13 88911147 88911965 -31372347 - RLTR13B2 LTR ERVK 0 822 1 5 1263 7682 65 14 9 chr13 88911965 88912325 -31371987 - L1_Mm LINE L1 -1256 4627 4267 5 1263 7470 68 5 3 chr13 88912320 88913613 -31370699 + L1Md_F2 LINE L1 5264 6559 -23 5 1263 2635 52 9 3 chr13 88913613 88913938 -31370374 - IAPLTR2b LTR ERVK 0 327 1 5 1263 6779 45 4 11 chr13 88913940 88914775 -31369537 - IAPEz-int LTR ERVK -2 6479 5651 5 1263 2671 64 0 3 chr13 88914768 88915111 -31369201 - IAPEz-int LTR ERVK -4781 1700 1359 5 1263 3848 59 2 18 chr13 88915111 88915614 -31368698 - IAPEz-int LTR ERVK -5819 662 168 5 1263 237 302 0 0 chr13 88915614 88915667 -31368645 - RLTR27 LTR ERVK -34 275 223 5 1263 936 94 93 66 chr13 88915667 88915849 -31368463 - IAPEz-int LTR ERVK -6286 195 9 5 1263 2621 56 9 3 chr13 88915850 88916175 -31368137 - IAPLTR2b LTR ERVK 0 327 1 5 1263 2160 103 6 18 chr13 88916236 88916600 -31367712 + L1_Mus1 LINE L1 6237 6567 0 5 1263 3039 40 3 3 chr13 88916864 88917242 -31367070 - L1Md_F3 LINE L1 -2 6582 6205 5 1263 244 326 95 18 chr13 88917248 88917470 -31366842 - L1MD2 LINE L1 -2 6357 6119 5 1263 460 175 67 0 chr13 88917536 88917656 -31366656 - Lx9 LINE L1 -15 7629 7502 5 1263 242 213 21 0 chr13 88917670 88917717 -31366595 - B1F2 SINE Alu -53 96 49 5 1263 2881 212 11 56 chr13 88917777 88917917 -31366395 - Lx9 LINE L1 -160 7484 7352 5 1263 4646 26 54 5 chr13 88917917 88918493 -31365819 - L1Md_F3 LINE L1 -1 6583 5980 5 1263 2881 212 11 56 chr13 88918493 88918937 -31365375 - Lx9 LINE L1 -293 7351 6918 5 1263 207 0 0 0 chr13 88918937 88918960 -31365352 + (TTG)n Simple_repeat Simple_repeat 2 24 0 5 1263 1086 89 7 0 chr13 88918967 88919113 -31365199 - B1_Mus1 SINE Alu 0 148 2 5 1263 2881 212 11 56 chr13 88919113 88919177 -31365135 - Lx9 LINE L1 -727 6917 6857 5 1263 279 0 0 0 chr13 88919819 88919850 -31364462 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1263 701 83 0 0 chr13 88919850 88919946 -31364366 - L1_Mus4 LINE L1 -753 5883 5788 5 1263 882 82 7 36 chr13 88919978 88919994 -31364318 - B1_Mm SINE Alu 0 147 136 5 1263 219 36 0 0 chr13 88919994 88920022 -31364290 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 5 1263 882 82 7 36 chr13 88920022 88920144 -31364168 - B1_Mm SINE Alu -12 135 13 5 1263 4548 148 4 4 chr13 88920144 88920894 -31363418 - L1_Mus4 LINE L1 -121 5762 5012 5 1263 4867 102 27 1 chr13 88920894 88921604 -31362708 + L1_Mus4 LINE L1 5903 6630 -6 5 1263 816 356 63 49 chr13 88922150 88922785 -31361527 + Lx8 LINE L1 6698 7341 -132 5 1263 367 331 30 30 chr13 88923093 88923227 -31361085 - MLT1A0 LTR MaLR -90 275 142 5 1263 1127 99 6 17 chr13 88923278 88923294 -31361018 - B2_Mm1a SINE B2 -19 174 160 5 1263 225 65 0 0 chr13 88923294 88923325 -31360987 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 5 1263 1127 99 6 17 chr13 88923325 88923482 -31360830 - B2_Mm1a SINE B2 -34 159 3 5 1263 276 277 88 8 chr13 88924583 88924779 -31359533 - L1MA7 LINE L1 -69 6222 6007 5 1263 275 278 52 15 chr13 88924905 88925040 -31359272 - L1_Rod LINE L1 -2291 3556 3417 5 1263 337 214 0 63 chr13 88925066 88925161 -31359151 - L1_Rod LINE L1 -3458 2389 2301 5 1263 944 124 18 0 chr13 88925183 88925352 -31358960 + Lx LINE L1 6472 6643 -11 5 1263 441 36 0 0 chr13 88925352 88925407 -31358905 + (CATA)n Simple_repeat Simple_repeat 2 56 0 5 1263 1334 220 19 53 chr13 88925416 88925790 -31358522 + RMER10B LTR ERVL 37 397 -1 5 1263 747 62 0 0 chr13 88925831 88925928 -31358384 + (TC)n Simple_repeat Simple_repeat 2 98 0 5 1263 441 0 0 0 chr13 88925928 88925976 -31358336 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1263 728 239 10 5 chr13 88926041 88926239 -31358073 - L1_Rod LINE L1 -3596 2251 2053 5 1263 928 203 60 20 chr13 88926640 88926867 -31357445 - ORR1A3-int LTR MaLR -1335 245 1 5 1263 1866 169 16 0 chr13 88926870 88927183 -31357129 - ORR1A3 LTR MaLR -8 318 1 5 1263 1353 266 96 64 chr13 88927183 88927768 -31356544 - L1_Rod LINE L1 -2594 3253 2678 5 1263 279 0 0 0 chr13 88927768 88927799 -31356513 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1263 1353 266 96 64 chr13 88927799 88928012 -31356300 - L1_Rod LINE L1 -3170 2677 2430 5 1263 1719 199 18 9 chr13 88928052 88928770 -31355542 + Lx4B LINE L1 835 1409 -4468 5 1263 3811 135 44 35 chr13 88928781 88929441 -31354871 + Lx2B LINE L1 6333 6998 -2 5 1263 183 93 17 69 chr13 88929442 88929500 -31354812 + A-rich Low_complexity Low_complexity 5 59 0 6 1263 7546 174 18 12 chr13 88929502 88931015 -31353297 + Lx4B LINE L1 5441 6937 -121 5 1263 42 71 0 0 chr13 88931077 88931161 -31353151 + AT_rich Low_complexity Low_complexity 1 84 0 6 1263 189 0 0 0 chr13 88931278 88931299 -31353013 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1263 32 43 0 0 chr13 88931945 88931991 -31352321 + AT_rich Low_complexity Low_complexity 1 46 0 6 1263 316 278 0 22 chr13 88932211 88932303 -31352009 + RMER15 LTR ERVL 350 439 -136 6 1263 2579 184 21 25 chr13 88932479 88932993 -31351319 - RLTR11A2 LTR ERVK 0 527 16 6 1263 399 284 19 10 chr13 88933963 88934066 -31350246 + ID_B1 SINE B4 121 224 0 6 1263 295 191 17 76 chr13 88934186 88934305 -31350007 + T-rich Low_complexity Low_complexity 1 112 0 6 1263 21 0 0 0 chr13 88935096 88935117 -31349195 + AT_rich Low_complexity Low_complexity 1 21 0 6 1263 343 372 136 16 chr13 88935956 88936396 -31347916 - MLT1H LTR MaLR 0 549 57 6 1263 22 103 0 0 chr13 88937429 88937507 -31346805 + AT_rich Low_complexity Low_complexity 1 78 0 6 1263 24 32 0 0 chr13 88937627 88937658 -31346654 + AT_rich Low_complexity Low_complexity 1 31 0 6 1263 26 74 0 0 chr13 88938369 88938423 -31345889 + AT_rich Low_complexity Low_complexity 1 54 0 6 1263 24 32 0 0 chr13 88938463 88938494 -31345818 + AT_rich Low_complexity Low_complexity 1 31 0 6 1263 228 378 88 11 chr13 88938953 88939135 -31345177 + MIR3 SINE MIR 10 205 -3 6 1263 870 97 0 8 chr13 88939327 88939452 -31344860 + L1VL2 LINE L1 675 798 -5537 6 1263 2356 205 16 22 chr13 88939452 88939940 -31344372 + RLTR11A LTR ERVK 44 528 0 6 1263 3247 39 3 0 chr13 88940164 88940548 -31343764 + IAPEY_LTR LTR ERVK 1 385 0 6 1263 606 28 0 0 chr13 88942034 88942106 -31342206 + (GA)n Simple_repeat Simple_repeat 2 73 0 6 1263 28 61 0 0 chr13 88942349 88942398 -31341914 + AT_rich Low_complexity Low_complexity 1 49 0 6 1263 2157 182 131 0 chr13 88942509 88943019 -31341293 - Lx9 LINE L1 0 7644 7068 6 1263 494 311 62 10 chr13 88943477 88943685 -31340627 - RMER15 LTR ERVL -13 562 344 6 1263 632 271 84 16 chr13 88943906 88944097 -31340215 + Lx8 LINE L1 7049 7252 -221 6 1263 233 302 82 65 chr13 88944241 88944425 -31339887 + Lx8 LINE L1 7239 7425 -48 6 1263 291 267 0 13 chr13 88944997 88945073 -31339239 + (CA)n Simple_repeat Simple_repeat 2 76 0 6 1263 449 272 43 25 chr13 88945427 88945589 -31338723 - RSINE1 SINE B4 0 165 1 6 1263 549 233 33 0 chr13 88946076 88946196 -31338116 + B1_Mus2 SINE Alu 3 126 -21 6 1263 279 0 0 0 chr13 88946280 88946311 -31338001 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1263 284 278 0 0 chr13 88946898 88946952 -31337360 + ID4_ SINE ID 2 55 -28 6 1263 618 14 0 0 chr13 88946954 88947025 -31337287 + (TC)n Simple_repeat Simple_repeat 2 72 0 6 1263 276 30 0 0 chr13 88948459 88948492 -31335820 + (TTAA)n Simple_repeat Simple_repeat 3 35 0 6 1263 1489 151 16 0 chr13 88948633 88948884 -31335428 + Lx2 LINE L1 6743 6997 0 6 1263 218 192 0 0 chr13 88951256 88951308 -31333004 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 1263 335 154 250 0 chr13 88951403 88951507 -31332805 + BC1_Mm scRNA scRNA 1 130 -22 6 1263 291 93 0 0 chr13 88951515 88951558 -31332754 + (GAAAA)n Simple_repeat Simple_repeat 3 45 0 6 1263 2493 224 86 4 chr13 88951750 88952300 -31332012 - Lx6 LINE L1 -8 7452 6858 6 1263 223 240 0 0 chr13 88952300 88952350 -31331962 + (TCTCTG)n Simple_repeat Simple_repeat 4 53 0 6 1263 396 0 0 0 chr13 88952374 88952418 -31331894 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1263 1594 236 3 27 chr13 88952449 88952550 -31331762 - Lx6 LINE L1 -610 6850 6754 6 1263 396 0 0 0 chr13 88952550 88952594 -31331718 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1263 1594 236 3 27 chr13 88952594 88952863 -31331449 - Lx6 LINE L1 -707 6753 6489 6 1263 408 154 0 0 chr13 88952855 88952920 -31331392 - Lx6 LINE L1 -491 6969 6905 6 1263 248 246 0 0 chr13 88953112 88953177 -31331135 + (TAA)n Simple_repeat Simple_repeat 2 66 0 6 1263 319 113 32 0 chr13 88953999 88954061 -31330251 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1263 23 0 0 0 chr13 88954315 88954338 -31329974 + AT_rich Low_complexity Low_complexity 1 23 0 6 1263 264 30 0 0 chr13 88954669 88954702 -31329610 + (CA)n Simple_repeat Simple_repeat 1 33 0 6 1263 355 212 19 60 chr13 88955714 88955826 -31328486 - MLT1E3 LTR MaLR -9 671 527 6 1263 432 0 0 0 chr13 88955954 88956002 -31328310 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 6 1263 2291 191 118 75 chr13 88956128 88956783 -31327529 - RMER6C LTR ERVK -7 683 1 6 1263 212 320 27 0 chr13 88956935 88957010 -31327302 - MIR SINE MIR -89 173 97 6 1263 687 199 20 0 chr13 88957116 88957262 -31327050 + URR1A DNA MER1_type 78 226 0 6 1263 249 271 50 50 chr13 88957262 88957362 -31326950 - MTE2b-int LTR MaLR -927 653 554 6 1263 353 302 113 59 chr13 88957438 88957677 -31326635 - MTE2b-int LTR MaLR -1117 253 2 6 1263 944 276 42 62 chr13 88957679 88958065 -31326247 - MTE2b LTR MaLR 0 379 2 6 1263 276 53 0 0 chr13 88958232 88958270 -31326042 + (CCA)n Simple_repeat Simple_repeat 3 40 0 6 1263 427 264 28 0 chr13 88958281 88958425 -31325887 + MER103 DNA DNA 17 164 -2 6 1263 201 74 0 0 chr13 88959497 88959524 -31324788 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1263 1693 139 40 23 chr13 88959529 88959830 -31324482 - Lx2 LINE L1 0 6997 6692 6 1263 801 95 0 0 chr13 88960899 88961015 -31323297 + (GA)n Simple_repeat Simple_repeat 1 116 0 6 1263 25 0 0 0 chr13 88961045 88961070 -31323242 + GC_rich Low_complexity Low_complexity 1 25 0 6 1263 198 0 0 0 chr13 88962107 88962129 -31322183 + (TGGGGG)n Simple_repeat Simple_repeat 3 24 0 6 1263 252 0 0 0 chr13 88963169 88963197 -31321115 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1263 411 162 0 0 chr13 88963313 88963393 -31320919 + (CA)n Simple_repeat Simple_repeat 2 81 0 6 1263 477 0 0 0 chr13 88963766 88963819 -31320493 + (T)n Simple_repeat Simple_repeat 1 53 0 6 1263 28 0 0 0 chr13 88964579 88964607 -31319705 + AT_rich Low_complexity Low_complexity 1 28 0 6 1263 22 56 0 0 chr13 88964971 88965007 -31319305 + AT_rich Low_complexity Low_complexity 1 36 0 6 1263 279 257 0 0 chr13 88965488 88965558 -31318754 + Lx9 LINE L1 7572 7641 -3 6 1263 186 43 0 0 chr13 88965558 88965581 -31318731 + (TAA)n Simple_repeat Simple_repeat 2 24 0 6 1263 450 0 0 0 chr13 88968614 88968664 -31315648 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 6 1263 630 282 53 19 chr13 88968965 88969171 -31315141 - B3 SINE B2 -2 214 2 6 1263 318 333 7 29 chr13 88969194 88969330 -31314982 - RMER12 LTR ERVK -470 852 720 6 1263 21 57 0 0 chr13 88970051 88970086 -31314226 + AT_rich Low_complexity Low_complexity 1 35 0 6 1263 28 48 0 0 chr13 88970375 88970417 -31313895 + AT_rich Low_complexity Low_complexity 1 42 0 6 1263 630 257 19 32 chr13 88970988 88971145 -31313167 + B3 SINE B2 2 156 -60 6 1263 23 0 0 0 chr13 88971336 88971359 -31312953 + AT_rich Low_complexity Low_complexity 1 23 0 6 1263 1004 103 7 0 chr13 88971359 88971505 -31312807 - B1_Mus2 SINE Alu 0 147 1 6 1263 369 0 0 0 chr13 88972123 88972164 -31312148 + (TC)n Simple_repeat Simple_repeat 1 41 0 6 1263 711 33 0 0 chr13 88972164 88972253 -31312059 + (CA)n Simple_repeat Simple_repeat 1 90 0 6 1263 396 0 0 0 chr13 88972924 88972968 -31311344 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 1263 852 39 0 0 chr13 88973720 88973824 -31310488 + (TTCCC)n Simple_repeat Simple_repeat 4 107 0 6 1263 369 0 0 0 chr13 88974501 88974542 -31309770 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1263 3894 68 15 72 chr13 88975725 88975793 -31308519 - L1_Mus2 LINE L1 -2 6564 6502 6 1263 3042 49 5 33 chr13 88975793 88976192 -31308120 + RLTR10 LTR ERVK 1 388 -2 6 1263 3894 68 15 72 chr13 88976192 88976724 -31307588 - L1_Mus2 LINE L1 -65 6501 5998 6 1263 3031 54 5 0 chr13 88976746 88977135 -31307177 + L1_Mus2 LINE L1 5588 5978 -588 6 1263 698 240 114 97 chr13 88977205 88977721 -31306591 - Lx7 LINE L1 0 7696 7172 6 1263 367 206 0 0 chr13 88977718 88977781 -31306531 - Lx7 LINE L1 -723 6973 6911 6 1263 345 250 62 0 chr13 88977930 88978042 -31306270 - L1_Mur3 LINE L1 -6897 815 697 6 1263 406 290 162 31 chr13 88978108 88978215 -31306097 - L1MB2 LINE L1 -248 5923 5821 6 1263 4261 81 2 11 chr13 88978215 88978787 -31305525 - L1_Mus1 LINE L1 0 6567 6001 6 1263 406 290 162 31 chr13 88978787 88979092 -31305220 - L1MB2 LINE L1 -351 5820 5458 6 1263 506 349 48 27 chr13 88979236 88979556 -31304756 - Lx9 LINE L1 -289 7355 6976 6 1263 705 323 83 19 chr13 88979585 88979910 -31304402 + Lx9 LINE L1 6382 6727 -917 6 1263 4496 121 38 1 chr13 88979922 88980611 -31303701 - Lx LINE L1 -324 6330 5617 6 1263 369 0 0 0 chr13 88980624 88980665 -31303647 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1263 336 116 63 0 chr13 88980798 88980893 -31303419 + (TA)n Simple_repeat Simple_repeat 1 101 0 6 1263 995 290 133 16 chr13 88980893 88981622 -31302690 - L1MA6 LINE L1 -100 6200 5387 6 1263 542 286 97 30 chr13 88981709 88982141 -31302171 - L1MA6 LINE L1 -1394 4749 4289 6 1263 422 301 75 63 chr13 88982625 88982754 -31301558 + B3 SINE B2 39 167 -49 6 1263 657 66 0 0 chr13 88982754 88982845 -31301467 + (CATA)n Simple_repeat Simple_repeat 4 94 0 6 1263 422 301 75 63 chr13 88982845 88982889 -31301423 + B3 SINE B2 168 214 -2 6 1263 21 36 0 0 chr13 88984243 88984271 -31300041 + AT_rich Low_complexity Low_complexity 1 28 0 6 1263 417 39 0 0 chr13 88984582 88984633 -31299679 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1263 56 39 0 0 chr13 88984707 88984784 -31299528 + AT_rich Low_complexity Low_complexity 1 77 0 6 1263 23 0 0 0 chr13 88986302 88986325 -31297987 + AT_rich Low_complexity Low_complexity 1 23 0 6 1263 1062 140 0 0 chr13 88986351 88986530 -31297782 + (TA)n Simple_repeat Simple_repeat 2 180 0 6 1263 1100 64 0 0 chr13 88986544 88986684 -31297628 - B1_Mm SINE Alu -1 146 7 6 1263 534 307 128 41 chr13 88986823 88987285 -31297027 + MLT1D LTR MaLR 3 504 -1 6 1263 650 200 0 0 chr13 88988708 88988828 -31295484 + MTD LTR MaLR 1 120 -299 6 1263 339 258 95 66 chr13 88988836 88988973 -31295339 + MTD LTR MaLR 278 418 -1 6 1263 225 0 0 0 chr13 88989307 88989332 -31294980 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1263 237 108 0 0 chr13 88989335 88989372 -31294940 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 1263 30 59 0 0 chr13 88990376 88990427 -31293885 + AT_rich Low_complexity Low_complexity 1 51 0 7 1263 25 51 0 0 chr13 88990650 88990689 -31293623 + AT_rich Low_complexity Low_complexity 1 39 0 7 1263 33 0 0 0 chr13 88990725 88990758 -31293554 + AT_rich Low_complexity Low_complexity 1 33 0 7 1263 31605 83 10 34 chr13 88991384 88995779 -31288533 - L1Md_F2 LINE L1 -12 6570 2348 7 1263 234 62 0 0 chr13 88995779 88995811 -31288501 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 1263 31605 108 22 34 chr13 88995811 88997825 -31286487 - L1Md_F2 LINE L1 -3536 2347 311 7 1264 347 0 0 23 chr13 88998049 88998093 -31286219 + (TTATA)n Simple_repeat Simple_repeat 5 47 0 7 1264 266 328 160 21 chr13 88999131 88999318 -31284994 - MLT1K LTR MaLR 0 595 383 7 1264 649 269 7 7 chr13 88999715 88999857 -31284455 - B1F SINE Alu -1 148 7 7 1264 269 174 0 0 chr13 88999870 88999916 -31284396 + MER58A DNA MER1_type 47 92 -132 7 1264 22 0 0 0 chr13 89000196 89000218 -31284094 + AT_rich Low_complexity Low_complexity 1 22 0 1 1264 31 0 0 0 chr13 89000377 89000408 -31283904 + AT_rich Low_complexity Low_complexity 1 31 0 2 1264 359 267 61 93 chr13 89000471 89000847 -31283465 - Charlie5 DNA MER1_type -40 2584 2221 3 1264 410 159 11 0 chr13 89002343 89002431 -31281881 + (TA)n Simple_repeat Simple_repeat 2 90 0 4 1264 4171 120 16 3 chr13 89002753 89003381 -31280931 - Lx3A LINE L1 -318 6663 6028 5 1264 907 216 91 36 chr13 89003381 89003602 -31280710 - ORR1B1 LTR MaLR -50 344 112 6 1264 182 164 0 18 chr13 89003602 89003658 -31280654 + A-rich Low_complexity Low_complexity 5 59 0 7 1264 357 329 34 68 chr13 89004963 89005139 -31279173 - MER45A DNA Tip100 -8 170 1 8 1264 284 284 37 0 chr13 89008225 89008306 -31276006 + MLT1A1 LTR MaLR 311 394 -14 9 1264 393 102 0 0 chr13 89009583 89009642 -31274670 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1264 1313 137 4 9 chr13 89010112 89010341 -31273971 + L1Md_F2 LINE L1 6351 6578 -4 1 1264 468 0 0 0 chr13 89010469 89010521 -31273791 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1264 231 275 52 52 chr13 89010548 89010663 -31273649 - RMER1C Other Other -4 1338 1224 1 1264 330 326 90 47 chr13 89010586 89010863 -31273449 - Lx8 LINE L1 -31 7442 7154 1 1264 258 105 0 0 chr13 89011421 89011459 -31272853 + (GA)n Simple_repeat Simple_repeat 1 38 0 1 1264 22 56 0 0 chr13 89013181 89013217 -31271095 + AT_rich Low_complexity Low_complexity 1 36 0 1 1264 1665 286 67 43 chr13 89014603 89015435 -31268877 - Lx9 LINE L1 0 7644 6793 1 1264 1528 294 41 21 chr13 89015437 89016017 -31268295 + Lx9 LINE L1 6058 6788 -856 1 1264 207 0 0 0 chr13 89017577 89017600 -31266712 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1264 579 332 28 36 chr13 89018349 89018599 -31265713 + B4A SINE B4 5 252 -40 1 1264 24 0 0 0 chr13 89018855 89018879 -31265433 + AT_rich Low_complexity Low_complexity 1 24 0 2 1264 464 303 78 13 chr13 89018879 89019033 -31265279 - RSINE1 SINE B4 0 165 2 2 1264 712 128 61 0 chr13 89019288 89019452 -31264860 + (CAGA)n Simple_repeat Simple_repeat 1 174 0 2 1264 600 258 108 50 chr13 89019737 89019978 -31264334 - MER2 DNA MER2_type 0 345 91 2 1264 1802 232 167 8 chr13 89019988 89020285 -31264027 + RMER6D LTR ERVK 1 348 -372 2 1264 342 0 0 0 chr13 89020285 89020323 -31263989 + (GA)n Simple_repeat Simple_repeat 1 38 0 2 1264 1802 232 167 8 chr13 89020323 89020521 -31263791 + RMER6D LTR ERVK 349 574 -146 2 1264 648 226 6 6 chr13 89020521 89020690 -31263622 - L1_Mur2 LINE L1 -6405 307 139 2 1264 947 331 30 25 chr13 89020880 89021242 -31263070 + MTD LTR MaLR 43 406 -13 2 1264 6897 198 45 17 chr13 89021982 89022138 -31262174 - Lx5 LINE L1 -7 7043 6888 2 1264 1859 179 189 3 chr13 89022138 89022514 -31261798 - RLTR41 LTR ERV1 0 446 1 2 1264 6897 198 45 17 chr13 89022514 89022988 -31261324 - Lx5 LINE L1 -163 6887 6399 2 1264 210 37 0 0 chr13 89022988 89023015 -31261297 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3 1264 6897 188 37 10 chr13 89023015 89023952 -31260360 - Lx5 LINE L1 -652 6398 5428 2 1264 1152 69 0 0 chr13 89025691 89025836 -31258476 - B1_Mus2 SINE Alu -2 145 1 3 1264 532 318 40 6 chr13 89026138 89026315 -31257997 + B3A SINE B2 3 185 -13 3 1264 332 319 87 16 chr13 89026796 89026981 -31257331 + L1ME3B LINE L1 5691 5888 -352 3 1264 31 58 0 0 chr13 89027387 89027439 -31256873 + AT_rich Low_complexity Low_complexity 1 52 0 3 1264 21 0 0 0 chr13 89027474 89027495 -31256817 + AT_rich Low_complexity Low_complexity 1 21 0 3 1264 180 0 0 0 chr13 89027583 89027603 -31256709 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1264 355 394 14 0 chr13 89028996 89029138 -31255174 - B1_Mur1 SINE Alu -3 146 3 3 1264 206 272 48 10 chr13 89030758 89030862 -31253450 + (TA)n Simple_repeat Simple_repeat 1 108 0 3 1264 208 204 23 0 chr13 89031655 89031699 -31252613 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 3 1264 327 345 20 27 chr13 89033366 89033515 -31250797 + RSINE1 SINE B4 3 150 -15 4 1264 21 89 0 0 chr13 89033520 89033576 -31250736 + AT_rich Low_complexity Low_complexity 1 56 0 4 1264 272 285 31 31 chr13 89034878 89035005 -31249307 - Lx7 LINE L1 -2 7694 7568 4 1264 236 30 0 29 chr13 89035005 89035039 -31249273 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 4 1264 2183 103 6 60 chr13 89035434 89035786 -31248526 + L1_Mus3 LINE L1 6306 6638 0 4 1264 185 35 69 0 chr13 89035932 89035961 -31248351 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4 1264 333 0 0 0 chr13 89036618 89036655 -31247657 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 4 1264 421 57 0 0 chr13 89037168 89037221 -31247091 - L1_Mus1 LINE L1 -403 6164 6112 4 1264 3217 63 5 0 chr13 89037222 89037634 -31246678 + L1_Mus1 LINE L1 6153 6566 -1 4 1264 214 75 27 95 chr13 89038736 89038810 -31245502 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 4 1264 535 293 155 39 chr13 89040136 89040420 -31243892 - MLT1B LTR MaLR -56 334 18 4 1264 21 57 0 0 chr13 89040524 89040559 -31243753 + AT_rich Low_complexity Low_complexity 1 35 0 5 1264 822 208 0 13 chr13 89040823 89040974 -31243338 - B1_Mur4 SINE Alu -1 149 1 5 1264 372 43 0 0 chr13 89041430 89041476 -31242836 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1264 202 275 0 0 chr13 89041476 89041516 -31242796 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1264 547 258 86 54 chr13 89042078 89042299 -31242013 - MER34 LTR ERV1 0 542 315 5 1264 279 289 99 13 chr13 89042447 89042598 -31241714 + L1MA4 LINE L1 5777 5940 -360 5 1264 2960 114 42 20 chr13 89042988 89043491 -31240821 - Lx3_Mus LINE L1 -8 7001 6488 5 1264 244 284 105 0 chr13 89043491 89043586 -31240726 + MTD LTR MaLR 10 114 -305 5 1264 337 315 258 23 chr13 89043562 89043783 -31240529 + MTE2a LTR MaLR 59 331 -48 5 1264 216 170 0 54 chr13 89044921 89044977 -31239335 + CT-rich Low_complexity Low_complexity 3 55 0 5 1264 378 0 0 0 chr13 89045628 89045670 -31238642 + (A)n Simple_repeat Simple_repeat 1 42 0 6 1264 200 412 53 0 chr13 89045839 89045970 -31238342 - L2 LINE L2 -868 2551 2414 6 1264 26 0 0 0 chr13 89046796 89046822 -31237490 + AT_rich Low_complexity Low_complexity 1 26 0 6 1264 369 0 0 0 chr13 89047836 89047877 -31236435 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1264 251 213 13 0 chr13 89048917 89048992 -31235320 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 1264 249 33 0 0 chr13 89049063 89049093 -31235219 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 1264 283 299 54 36 chr13 89049150 89049261 -31235051 - B3 SINE B2 -102 114 2 6 1264 283 274 60 0 chr13 89049984 89050068 -31234244 - Lx9 LINE L1 -173 7471 7383 6 1264 23 33 0 0 chr13 89051080 89051110 -31233202 + AT_rich Low_complexity Low_complexity 1 30 0 6 1264 32 0 0 0 chr13 89052763 89052795 -31231517 + AT_rich Low_complexity Low_complexity 1 32 0 6 1264 5386 108 27 2 chr13 89052814 89053638 -31230674 - Lx3_Mus LINE L1 0 7009 6166 7 1264 582 236 36 67 chr13 89055351 89055574 -31228738 - Lx7 LINE L1 0 7696 7481 7 1264 3078 177 29 106 chr13 89056189 89056638 -31227674 - RMER17D2 LTR ERVK 0 809 398 7 1264 1571 0 6 0 chr13 89056638 89056817 -31227495 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 7 1264 3078 177 29 106 chr13 89056817 89057244 -31227068 - RMER17D2 LTR ERVK -412 397 1 7 1264 21 0 0 0 chr13 89057257 89057278 -31227034 + AT_rich Low_complexity Low_complexity 1 21 0 7 1264 4490 175 64 19 chr13 89057278 89058156 -31226156 - Lx4A LINE L1 0 7058 6142 7 1264 22 0 0 0 chr13 89058480 89058502 -31225810 + AT_rich Low_complexity Low_complexity 1 22 0 7 1264 390 199 152 13 chr13 89059113 89059271 -31225041 + Lx9 LINE L1 7426 7605 -39 7 1264 24 32 0 0 chr13 89059326 89059357 -31224955 + AT_rich Low_complexity Low_complexity 1 31 0 7 1264 4837 131 43 33 chr13 89059365 89060218 -31224094 - Lx3B LINE L1 -3 6970 6109 7 1264 26 50 0 0 chr13 89061327 89061367 -31222945 + AT_rich Low_complexity Low_complexity 1 40 0 8 1264 241 257 106 99 chr13 89061553 89061704 -31222608 - Tigger12 DNA MER2_type -680 1279 1128 8 1264 1113 309 25 19 chr13 89062439 89062799 -31221513 - MTE2b LTR MaLR -8 371 10 8 1264 381 153 0 0 chr13 89063412 89063484 -31220828 + (TG)n Simple_repeat Simple_repeat 1 72 0 8 1264 240 177 50 12 chr13 89063742 89063822 -31220490 + (TA)n Simple_repeat Simple_repeat 2 84 0 8 1264 195 317 0 16 chr13 89066860 89066921 -31217391 + MIR SINE MIR 3 62 -200 8 1264 391 229 24 24 chr13 89068386 89068511 -31215801 + Lx9 LINE L1 7518 7642 -2 8 1264 23 68 0 0 chr13 89068623 89068667 -31215645 + AT_rich Low_complexity Low_complexity 1 44 0 8 1264 351 248 118 22 chr13 89072109 89072245 -31212067 - MER5B DNA MER1_type -29 149 1 8 1264 320 386 61 14 chr13 89072877 89073024 -31211288 - RSINE1 SINE B4 0 165 12 8 1264 429 276 0 0 chr13 89073198 89073332 -31210980 + CT-rich Low_complexity Low_complexity 3 136 0 9 1264 1023 120 0 0 chr13 89073332 89073490 -31210822 + (TTTCC)n Simple_repeat Simple_repeat 3 160 0 9 1264 24 0 0 0 chr13 89073581 89073605 -31210707 + AT_rich Low_complexity Low_complexity 1 24 0 9 1264 2046 157 45 0 chr13 89073605 89073961 -31210351 - Lx4A LINE L1 -2 7056 6685 9 1264 1641 347 66 25 chr13 89073970 89074076 -31210236 - Lx8 LINE L1 -232 7241 7136 9 1264 282 87 0 0 chr13 89074076 89074122 -31210190 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 9 1264 1641 347 66 25 chr13 89074122 89074954 -31209358 - Lx8 LINE L1 -338 7135 6264 9 1264 213 132 0 0 chr13 89075018 89075056 -31209256 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1264 477 0 0 0 chr13 89076080 89076133 -31208179 + (TA)n Simple_repeat Simple_repeat 1 53 0 9 1264 7094 138 5 1 chr13 89076333 89078061 -31206251 + L1_Mus4 LINE L1 4895 6630 -6 9 1264 2179 179 17 135 chr13 89079913 89080514 -31203798 - Lx2B LINE L1 -4 6996 6467 9 1264 234 368 0 0 chr13 89080601 89080677 -31203635 - ID4_ SINE ID 0 83 8 1 1264 200 234 26 0 chr13 89080805 89080882 -31203430 + CT-rich Low_complexity Low_complexity 2 80 0 1 1264 229 299 64 13 chr13 89081476 89081554 -31202758 + ID4 SINE ID 2 83 0 1 1264 2030 215 19 19 chr13 89081759 89082172 -31202140 + MTC LTR MaLR 1 413 -8 1 1264 648 70 0 0 chr13 89082870 89082956 -31201356 + (TG)n Simple_repeat Simple_repeat 2 87 0 1 1264 572 307 36 13 chr13 89083728 89083938 -31200374 - MLT1H-int LTR MaLR -1068 341 89 1 1264 32 67 0 0 chr13 89086771 89086831 -31197481 + AT_rich Low_complexity Low_complexity 1 60 0 1 1264 25 51 0 0 chr13 89086907 89086946 -31197366 + AT_rich Low_complexity Low_complexity 1 39 0 1 1264 2521 74 38 5 chr13 89087040 89087409 -31196903 + MusHAL1 LINE L1 920 1300 -1412 1 1264 510 361 31 10 chr13 89087567 89087760 -31196552 - B4A SINE B4 -94 198 2 1 1264 615 269 93 21 chr13 89088357 89088646 -31195666 + Lx9 LINE L1 7286 7595 -49 1 1264 894 248 20 28 chr13 89089911 89090160 -31194152 + Lx5 LINE L1 6804 7050 0 1 1264 26 30 0 0 chr13 89090461 89090494 -31193818 + AT_rich Low_complexity Low_complexity 1 33 0 1 1264 642 291 0 55 chr13 89090519 89090701 -31193611 - B3A SINE B2 -16 182 11 1 1264 266 315 103 58 chr13 89090936 89091091 -31193221 - L2c LINE L2 0 3387 3226 1 1264 27 0 0 0 chr13 89091324 89091351 -31192961 + AT_rich Low_complexity Low_complexity 1 27 0 1 1264 203 32 65 0 chr13 89092771 89092802 -31191510 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 1 1264 331 381 29 0 chr13 89092803 89092908 -31191404 - RSINE1 SINE B4 -14 151 44 1 1264 378 304 65 92 chr13 89093371 89093556 -31190756 - B3A SINE B2 -16 182 3 1 1264 331 301 8 42 chr13 89093761 89093879 -31190433 + PB1D10 SINE Alu 3 116 -1 1 1264 232 387 9 9 chr13 89094281 89094393 -31189919 + PB1D10 SINE Alu 1 112 -5 1 1264 2090 52 0 11 chr13 89095264 89095539 -31188773 + L1Md_F3 LINE L1 6299 6570 -14 1 1264 401 341 82 5 chr13 89096793 89096999 -31187313 + MER2 DNA MER2_type 124 345 0 1 1264 1096 86 6 0 chr13 89097026 89097189 -31187123 - L1_Mus2 LINE L1 -1 6565 6402 1 1264 194 343 59 0 chr13 89099540 89099642 -31184670 + L3 LINE CR1 4131 4238 -251 1 1264 591 306 74 33 chr13 89100609 89101220 -31183092 - L1M2 LINE L1 -2577 3566 2931 1 1264 494 237 55 50 chr13 89101260 89101442 -31182870 - Lx7 LINE L1 0 7696 7514 1 1264 3187 186 166 79 chr13 89101443 89102413 -31181899 - RLTR25A LTR ERVK 0 1103 1 1 1264 2587 251 53 32 chr13 89102421 89103078 -31181234 - Lx6 LINE L1 -204 7256 6586 1 1264 2219 233 45 21 chr13 89103065 89104043 -31180269 - Lx6 LINE L1 -1082 6378 5349 1 1264 2912 176 62 8 chr13 89104073 89104673 -31179639 - Lx3B LINE L1 -4 6969 6338 1 1264 718 279 135 20 chr13 89104685 89104930 -31179382 - MTD LTR MaLR -137 282 10 1 1264 528 16 0 0 chr13 89105072 89105133 -31179179 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1264 2828 124 58 41 chr13 89105134 89105647 -31178665 - Lx3B LINE L1 -627 6346 5825 1 1264 6712 201 31 60 chr13 89105650 89105728 -31178584 - Lx6 LINE L1 -513 5367 5307 1 1264 5512 54 4 3 chr13 89105728 89106433 -31177879 + L1Md_F2 LINE L1 5864 6569 -13 1 1264 6712 201 31 60 chr13 89106433 89108117 -31176195 - Lx6 LINE L1 -574 5306 3655 1 1264 38 0 0 0 chr13 89108391 89108429 -31175883 + AT_rich Low_complexity Low_complexity 1 38 0 1 1264 413 325 31 55 chr13 89109032 89109195 -31175117 + RSINE1 SINE B4 5 163 -2 1 1264 468 0 0 0 chr13 89110679 89110731 -31173581 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1264 1835 139 81 3 chr13 89110942 89111274 -31173038 + Lx LINE L1 6290 6647 -7 1 1264 23 0 0 0 chr13 89111320 89111343 -31172969 + AT_rich Low_complexity Low_complexity 1 23 0 1 1264 1752 158 21 15 chr13 89111989 89112317 -31171995 + Lx3A LINE L1 6643 6972 -9 1 1264 180 111 0 0 chr13 89112319 89112346 -31171966 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 1264 513 298 60 6 chr13 89113239 89113421 -31170891 + MER2 DNA MER2_type 86 277 -68 1 1264 1148 57 0 0 chr13 89114889 89115030 -31169282 - L1Md_F2 LINE L1 -358 6224 6084 1 1264 2425 73 21 3 chr13 89115030 89115359 -31168953 + L1Md_F2 LINE L1 6236 6570 -12 1 1264 26 0 0 0 chr13 89116022 89116048 -31168264 + AT_rich Low_complexity Low_complexity 1 26 0 1 1264 342 350 19 77 chr13 89116609 89116764 -31167548 + B1F SINE Alu 3 148 -1 1 1264 220 284 27 13 chr13 89117275 89117350 -31166962 + CT-rich Low_complexity Low_complexity 5 80 0 1 1264 21 0 0 0 chr13 89118857 89118878 -31165434 + AT_rich Low_complexity Low_complexity 1 21 0 1 1264 22 0 0 0 chr13 89119725 89119747 -31164565 + AT_rich Low_complexity Low_complexity 1 22 0 1 1264 23 0 0 0 chr13 89119845 89119868 -31164444 + AT_rich Low_complexity Low_complexity 1 23 0 1 1264 2741 39 0 0 chr13 89119925 89120258 -31164054 - L1Md_T LINE L1 -2 6580 6248 1 1264 6813 92 62 3 chr13 89120346 89121566 -31162746 - L1_Mus3 LINE L1 0 6638 5346 1 1264 2212 205 22 26 chr13 89121563 89122060 -31162252 - L1VL2 LINE L1 -5747 588 94 1 1264 6757 98 90 13 chr13 89122097 89123187 -31161125 - Lx3_Mus LINE L1 0 7009 5836 1 1264 342 0 0 0 chr13 89123196 89123234 -31161078 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1 1264 1099 59 0 0 chr13 89123235 89123370 -31160942 - B1_Mm SINE Alu -12 135 1 1 1264 351 265 50 50 chr13 89123644 89123803 -31160509 - L1M2 LINE L1 -482 5815 5657 1 1264 360 0 0 0 chr13 89124471 89124511 -31159801 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1264 594 250 25 0 chr13 89124585 89124705 -31159607 - B3 SINE B2 -93 123 1 1 1264 1592 300 58 51 chr13 89125191 89126268 -31158044 - Lx6 LINE L1 -26 7434 5998 1 1264 354 45 0 0 chr13 89126276 89126320 -31157992 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 19 40516 15 2 6 chr13 89126559 89132757 -31151555 - L1Md_A LINE L1 -3 6579 411 1 1265 3426 276 81 7 chr13 89133287 89134357 -31149955 - Lx7 LINE L1 -281 7415 6266 1 1265 361 254 13 75 chr13 89134358 89134473 -31149839 + B1F2 SINE Alu 34 147 -1 1 1265 468 280 20 7 chr13 89134518 89134669 -31149643 - Lx7 LINE L1 -1446 6250 6098 1 1265 1853 266 25 8 chr13 89134798 89135283 -31149029 + MuRRS4-int LTR ERV1 3533 4025 -1038 1 1265 1771 97 264 0 chr13 89135552 89135904 -31148408 + RLTR47_MM LTR ERV1 1 445 -87 1 1265 252 0 0 0 chr13 89135904 89135932 -31148380 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1265 388 232 0 0 chr13 89135941 89136023 -31148289 - Lx7 LINE L1 -308 5572 5491 1 1265 597 161 376 19 chr13 89136023 89136277 -31148035 - RMER6C LTR ERVK -374 346 1 1 1265 898 248 111 82 chr13 89136277 89136305 -31148007 - L1_Mur3 LINE L1 -3951 1929 1891 1 1265 194 0 39 0 chr13 89136305 89136331 -31147981 + (TTG)n Simple_repeat Simple_repeat 1 27 0 1 1265 898 260 96 68 chr13 89136331 89137357 -31146955 - L1_Mur3 LINE L1 -3990 1890 845 1 1265 275 219 31 15 chr13 89138590 89138655 -31145657 + B1_Mur3 SINE Alu 63 128 -21 1 1265 306 0 0 0 chr13 89139038 89139072 -31145240 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 1 1265 1320 67 0 6 chr13 89139075 89139254 -31145058 - L1Md_F3 LINE L1 -10 6574 6397 1 1265 380 45 0 0 chr13 89139254 89139298 -31145014 + L1Md_F3 LINE L1 6343 6386 -198 1 1265 7714 65 0 5 chr13 89139388 89140725 -31143587 - L1Md_F2 LINE L1 -8 6574 5243 1 1265 203 333 0 36 chr13 89140788 89140872 -31143440 + L2a LINE L2 3333 3413 -13 1 1265 1444 319 80 14 chr13 89141384 89142023 -31142289 - Lx9 LINE L1 -644 7000 6320 1 1265 27 0 0 0 chr13 89142347 89142374 -31141938 + AT_rich Low_complexity Low_complexity 1 27 0 1 1265 738 379 77 13 chr13 89143305 89143695 -31140617 - Tigger7 DNA MER2_type -2073 418 4 1 1265 335 363 121 0 chr13 89143701 89143883 -31140429 + ID_B1 SINE B4 8 211 -13 1 1265 5698 103 4 14 chr13 89144227 89145058 -31139254 - Lx LINE L1 0 6654 5833 1 1265 1073 222 47 66 chr13 89145279 89145726 -31138586 - Lx2B LINE L1 -11 6989 6313 1 1265 336 83 0 0 chr13 89145899 89145947 -31138365 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1265 189 0 0 0 chr13 89145998 89146019 -31138293 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1 1265 2954 72 31 0 chr13 89146064 89146452 -31137860 + MTB LTR MaLR 1 400 0 1 1265 24 0 0 0 chr13 89146540 89146564 -31137748 + AT_rich Low_complexity Low_complexity 1 24 0 1 1265 2675 257 41 3 chr13 89148900 89149555 -31134757 - Lx9 LINE L1 -592 7052 6373 1 1265 1616 243 131 0 chr13 89149560 89149967 -31134345 + Lx9 LINE L1 7049 7475 -169 1 1265 330 98 0 0 chr13 89149967 89150018 -31134294 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1265 1616 243 131 0 chr13 89150018 89150136 -31134176 + Lx9 LINE L1 7476 7642 -2 1 1265 1258 41 0 0 chr13 89150138 89150285 -31134027 + B1_Mm SINE Alu 1 147 0 1 1265 235 24 95 0 chr13 89150285 89150327 -31133985 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1 1265 26 30 0 0 chr13 89150350 89150383 -31133929 + AT_rich Low_complexity Low_complexity 1 33 0 1 1265 689 257 7 20 chr13 89150645 89150792 -31133520 - RLTR19B LTR ERVK 0 499 355 1 1265 189 0 0 0 chr13 89150803 89150824 -31133488 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1 1265 924 156 0 0 chr13 89150824 89151004 -31133308 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1265 591 168 0 0 chr13 89151015 89151134 -31133178 + (CA)n Simple_repeat Simple_repeat 2 120 0 1 1265 696 206 7 15 chr13 89151134 89151273 -31133039 - RLTR19B LTR ERVK -381 334 188 1 1265 998 199 14 5 chr13 89151273 89151490 -31132822 - Lx2A1 LINE L1 0 7008 6790 1 1265 687 221 40 40 chr13 89151490 89151526 -31132786 - RLTR19B LTR ERVK -309 187 155 1 1265 1948 169 14 19 chr13 89151526 89151893 -31132419 + L1_Mur1 LINE L1 4658 5022 -864 1 1265 387 0 0 0 chr13 89151922 89151965 -31132347 + (CAGAA)n Simple_repeat Simple_repeat 5 47 0 1 1265 561 147 11 0 chr13 89151965 89152060 -31132252 - RLTR19B LTR ERVK -400 96 1 1 1265 4769 66 9 25 chr13 89153305 89153957 -31130355 + L1Md_F2 LINE L1 5940 6581 -1 1 1265 311 392 25 70 chr13 89154582 89154647 -31129665 - LTR80A LTR ERVL -40 543 486 1 1265 3842 102 33 7 chr13 89154647 89155229 -31129083 + L1_Mus3 LINE L1 6026 6622 -16 1 1265 558 0 0 0 chr13 89155229 89155291 -31129021 + (GAA)n Simple_repeat Simple_repeat 1 62 0 1 1265 311 392 25 70 chr13 89155291 89155424 -31128888 - LTR80A LTR ERVL -98 485 354 1 1265 189 121 0 0 chr13 89155458 89155491 -31128821 + (TA)n Simple_repeat Simple_repeat 1 33 0 1 1265 321 140 0 0 chr13 89156094 89156151 -31128161 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1265 947 326 3 0 chr13 89156200 89156507 -31127805 - Lx9 LINE L1 -712 6932 6625 2 1265 325 250 81 0 chr13 89158048 89158184 -31126128 - Lx9 LINE L1 -8 7636 7490 2 1265 424 281 129 13 chr13 89158198 89158291 -31126021 - Lx9 LINE L1 -225 7419 7327 2 1265 483 18 0 0 chr13 89158291 89158347 -31125965 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1265 424 281 129 13 chr13 89158347 89158408 -31125904 - Lx9 LINE L1 -318 7326 7248 2 1265 2118 237 76 15 chr13 89158434 89158973 -31125339 - Lx9 LINE L1 -454 7190 6619 2 1265 212 0 36 0 chr13 89159052 89159080 -31125232 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2 1265 6674 120 34 10 chr13 89159080 89160281 -31124031 - Lx LINE L1 -14 6640 5415 2 1265 29 0 0 0 chr13 89160290 89160319 -31123993 + AT_rich Low_complexity Low_complexity 1 29 0 2 1265 25 0 0 0 chr13 89160437 89160462 -31123850 + AT_rich Low_complexity Low_complexity 1 25 0 2 1265 5800 90 14 0 chr13 89160647 89161445 -31122867 - L1_Mus1 LINE L1 -1 6566 5758 2 1265 12812 106 10 13 chr13 89161445 89162888 -31121424 + L1_Mm LINE L1 3851 5298 -585 2 1265 4873 41 0 0 chr13 89162888 89163472 -31120840 + L1Md_T LINE L1 5998 6581 -1 2 1265 12812 106 10 13 chr13 89163472 89163950 -31120362 + L1_Mm LINE L1 5299 5767 -116 2 1265 396 0 0 0 chr13 89164038 89164082 -31120230 + (TTG)n Simple_repeat Simple_repeat 2 45 0 2 1265 279 133 0 0 chr13 89164380 89164425 -31119887 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2 1265 5777 61 0 19 chr13 89166102 89166854 -31117458 - L1_Mm LINE L1 -17 5866 5129 2 1265 1725 176 218 35 chr13 89166856 89167338 -31116974 - RMER6C LTR ERVK -120 570 1 2 1265 450 65 0 0 chr13 89167596 89167658 -31116654 + (TG)n Simple_repeat Simple_repeat 1 62 0 2 1265 287 77 0 71 chr13 89167810 89167866 -31116446 + (TCTCTG)n Simple_repeat Simple_repeat 2 53 0 2 1265 21 0 0 0 chr13 89168253 89168274 -31116038 + AT_rich Low_complexity Low_complexity 1 21 0 2 1265 287 272 32 21 chr13 89168391 89168485 -31115827 - L1M1 LINE L1 -675 5628 5534 2 1265 283 268 130 8 chr13 89168493 89168646 -31115666 - L1_Rod LINE L1 -450 5433 5263 2 1265 459 0 0 0 chr13 89168657 89168708 -31115604 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1265 420 20 0 0 chr13 89168708 89168756 -31115556 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1265 662 221 197 0 chr13 89168821 89169029 -31115283 + RMER1C Other Other 1091 1339 -3 2 1265 918 240 36 36 chr13 89169086 89169311 -31115001 + URR1B DNA MER1_type 1 225 0 2 1265 584 303 30 18 chr13 89170959 89171127 -31113185 - B3 SINE B2 -46 170 1 2 1265 182 0 0 97 chr13 89171209 89171240 -31113072 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 2 1265 238 244 101 34 chr13 89171679 89171768 -31112544 + LTR89 LTR ERVL? 174 268 -611 2 1265 280 250 105 0 chr13 89172494 89172570 -31111742 - MLT1B LTR MaLR -27 363 280 2 1265 231 192 27 14 chr13 89172981 89173055 -31111257 + CT-rich Low_complexity Low_complexity 1 75 0 2 1265 580 226 6 6 chr13 89173307 89173463 -31110849 + CT-rich Low_complexity Low_complexity 4 159 0 2 1265 373 294 9 0 chr13 89173778 89173887 -31110425 - Lx8 LINE L1 -1558 5915 5806 2 1265 1972 196 51 32 chr13 89174244 89174715 -31109597 + RMER4B LTR ERVK 18 454 -12 2 1265 225 351 36 9 chr13 89174866 89174978 -31109334 + MLT1C LTR MaLR 353 467 0 2 1265 393 310 70 81 chr13 89175407 89175593 -31108719 - B3A SINE B2 0 198 15 2 1265 274 205 24 49 chr13 89177908 89177990 -31106322 + B3A SINE B2 1 80 -118 2 1265 242 29 29 0 chr13 89178190 89178225 -31106087 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1265 221 287 18 9 chr13 89178225 89178329 -31105983 + GA-rich Low_complexity Low_complexity 1 105 0 2 1265 216 122 0 0 chr13 89178329 89178370 -31105942 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1265 279 0 0 0 chr13 89178924 89178955 -31105357 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 2 1265 242 340 29 88 chr13 89179008 89179179 -31105133 - LTR85b LTR Gypsy? -3 781 621 2 1265 300 266 12 12 chr13 89179769 89179849 -31104463 - LTR85b LTR Gypsy? -704 80 1 2 1265 25 51 0 0 chr13 89179989 89180028 -31104284 + AT_rich Low_complexity Low_complexity 1 39 0 2 1265 22 0 0 0 chr13 89180656 89180678 -31103634 + AT_rich Low_complexity Low_complexity 1 22 0 2 1265 600 219 47 14 chr13 89180790 89180938 -31103374 - RLTR45 LTR ERVK 0 482 330 2 1265 390 367 65 13 chr13 89181706 89181938 -31102374 - MIR SINE MIR -15 247 4 2 1265 26 30 0 0 chr13 89183496 89183529 -31100783 + AT_rich Low_complexity Low_complexity 1 33 0 2 1265 339 197 138 49 chr13 89183529 89183652 -31100660 - Lx7 LINE L1 0 7696 7563 2 1265 973 233 23 19 chr13 89183735 89183949 -31100363 - Lx7 LINE L1 -799 6897 6683 2 1265 891 237 13 53 chr13 89183959 89184186 -31100126 + Lx7 LINE L1 6886 7103 -593 2 1265 1743 238 34 32 chr13 89184216 89184275 -31100037 - MTC LTR MaLR -8 413 362 2 1265 1041 189 265 55 chr13 89184275 89184656 -31099656 - RMER6B LTR ERVK 0 461 1 2 1265 1743 238 34 32 chr13 89184656 89185004 -31099308 - MTC LTR MaLR -60 361 5 2 1265 774 281 87 38 chr13 89185040 89185531 -31098781 + Lx7 LINE L1 7181 7675 -21 2 1265 21 89 0 0 chr13 89185599 89185655 -31098657 + AT_rich Low_complexity Low_complexity 1 56 0 2 1265 199 372 32 11 chr13 89186333 89186428 -31097884 + MIRc SINE MIR 21 117 -151 2 1265 23 33 0 0 chr13 89187078 89187108 -31097204 + AT_rich Low_complexity Low_complexity 1 30 0 2 1265 547 209 0 92 chr13 89187116 89187269 -31097043 - Lx7 LINE L1 0 7696 7558 2 1265 550 262 0 14 chr13 89187674 89187821 -31096491 - B1_Mur1 SINE Alu 0 149 5 2 1265 647 318 67 60 chr13 89187838 89188373 -31095939 - L1MC2 LINE L1 -185 6159 5621 2 1265 1143 55 7 0 chr13 89189231 89189376 -31094936 - B1_Mus2 SINE Alu 0 147 2 2 1265 1355 86 11 0 chr13 89189384 89189570 -31094742 - B2_Mm1t SINE B2 -4 189 2 2 1265 417 200 224 0 chr13 89189703 89189868 -31094444 - Lx9 LINE L1 -18 7626 7425 2 1265 316 279 0 11 chr13 89190115 89190202 -31094110 - Lx6 LINE L1 -328 7132 7047 2 1265 4371 273 40 62 chr13 89190261 89191438 -31092874 - Lx6 LINE L1 -395 7065 5930 2 1265 1130 56 14 0 chr13 89191438 89191582 -31092730 - B1_Mus2 SINE Alu 0 147 2 2 1265 5089 200 25 30 chr13 89191582 89192750 -31091562 - Lx6 LINE L1 -1531 5929 4758 2 1265 274 323 21 21 chr13 89193038 89193133 -31091179 - MER5B DNA MER1_type -4 174 80 2 1265 403 298 53 6 chr13 89194648 89194817 -31089495 + L1MD LINE L1 5604 5780 -579 2 1265 474 33 0 0 chr13 89194822 89194882 -31089430 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1265 10600 84 8 20 chr13 89195687 89196463 -31087849 - L1Md_F LINE L1 -3133 2750 1976 2 1265 225 0 0 0 chr13 89196463 89196488 -31087824 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1265 10600 111 38 12 chr13 89196488 89198062 -31086250 - L1Md_F LINE L1 -3908 1975 366 2 1265 761 161 99 23 chr13 89198104 89198276 -31086036 - B2_Mm2 SINE B2 0 195 11 2 1265 185 0 0 39 chr13 89198343 89198369 -31085943 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2 1265 739 321 43 92 chr13 89199019 89199292 -31085020 - MTEa LTR MaLR -6 373 116 2 1265 381 22 0 0 chr13 89199292 89199338 -31084974 + (TC)n Simple_repeat Simple_repeat 2 47 0 2 1265 1108 70 7 0 chr13 89199338 89199481 -31084831 - B1_Mus1 SINE Alu -3 145 2 2 1265 739 321 43 92 chr13 89199481 89199597 -31084715 - MTEa LTR MaLR -264 115 3 2 1265 1752 178 89 24 chr13 89200285 89200654 -31083658 + ORR1B1 LTR MaLR 2 394 0 2 1265 268 253 0 12 chr13 89200891 89200975 -31083337 + (TTA)n Simple_repeat Simple_repeat 2 84 0 2 1265 201 339 0 0 chr13 89203133 89203198 -31081114 + L2a LINE L2 3357 3421 -5 2 1265 302 156 16 0 chr13 89203741 89203805 -31080507 + (TA)n Simple_repeat Simple_repeat 1 65 0 2 1265 198 62 40 40 chr13 89204601 89204651 -31079661 + (TTTTTG)n Simple_repeat Simple_repeat 2 51 0 2 1265 205 102 40 20 chr13 89204934 89204984 -31079328 + T-rich Low_complexity Low_complexity 2 52 0 2 1265 450 36 0 0 chr13 89205050 89205106 -31079206 + (CA)n Simple_repeat Simple_repeat 2 57 0 2 1265 2410 199 7 6 chr13 89207481 89208048 -31076264 - Lx6 LINE L1 -1508 5952 5380 2 1265 232 279 0 14 chr13 89208050 89208119 -31076193 + Lx6 LINE L1 7211 7278 -182 2 1265 2079 196 45 20 chr13 89208120 89208728 -31075584 - RLTR20D LTR ERVK 0 568 1 2 1265 580 311 0 6 chr13 89208728 89208890 -31075422 + Lx6 LINE L1 7274 7434 -26 2 1265 23 0 0 0 chr13 89208961 89208984 -31075328 + AT_rich Low_complexity Low_complexity 1 23 0 2 1265 215 241 19 0 chr13 89209075 89209129 -31075183 + (CATA)n Simple_repeat Simple_repeat 4 58 0 2 1265 749 202 17 81 chr13 89209259 89209431 -31074881 + ORR1C2 LTR MaLR 1 161 -223 2 1265 2557 215 16 18 chr13 89209456 89210005 -31074307 - Lx4B LINE L1 -8 7050 6503 2 1265 264 91 0 0 chr13 89210032 89210076 -31074236 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1265 339 25 0 0 chr13 89210076 89210116 -31074196 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1265 462 61 0 0 chr13 89210116 89210182 -31074130 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 1265 873 272 29 5 chr13 89210213 89210420 -31073892 + ORR1C2 LTR MaLR 173 384 0 2 1265 772 342 40 30 chr13 89210439 89210937 -31073375 - Lx9 LINE L1 -356 7288 6786 2 1265 24 32 0 0 chr13 89211053 89211084 -31073228 + AT_rich Low_complexity Low_complexity 1 31 0 2 1265 207 200 0 0 chr13 89211586 89211621 -31072691 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 2 1265 21 0 0 0 chr13 89211665 89211686 -31072626 + AT_rich Low_complexity Low_complexity 1 21 0 2 1265 249 159 0 213 chr13 89211698 89211834 -31072478 + B2_Mm2 SINE B2 89 195 0 2 1265 466 309 106 43 chr13 89212258 89212512 -31071800 - MLT2B3 LTR ERVL -274 280 11 2 1265 262 290 29 29 chr13 89212836 89212939 -31071373 + HAL1 LINE L1 1814 1916 -591 2 1265 1816 341 73 20 chr13 89213675 89214685 -31069627 + Lx8 LINE L1 6256 7319 -154 2 1265 342 345 19 63 chr13 89215119 89215326 -31068986 + B3A SINE B2 1 198 0 2 1265 515 311 114 33 chr13 89217012 89217681 -31066631 - L1ME1 LINE L1 -202 6150 5428 2 1265 230 261 33 33 chr13 89217659 89217750 -31066562 - L1MD LINE L1 -870 5276 5186 2 1265 302 285 101 73 chr13 89217815 89217993 -31066319 - L1ME1 LINE L1 -1037 5282 5100 2 1265 345 319 41 55 chr13 89218210 89218429 -31065883 - L1ME1 LINE L1 -5222 1178 963 2 1265 614 287 81 41 chr13 89218685 89218938 -31065374 - L1MA9 LINE L1 -409 5903 5637 2 1265 450 0 0 0 chr13 89218938 89218988 -31065324 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1265 614 287 81 41 chr13 89218988 89219079 -31065233 - L1MA9 LINE L1 -676 5636 5545 2 1265 323 284 58 17 chr13 89220533 89220686 -31063626 + L1M5 LINE L1 5531 5685 -555 2 1265 27 0 0 0 chr13 89222310 89222337 -31061975 + AT_rich Low_complexity Low_complexity 1 27 0 3 1265 397 360 52 65 chr13 89223033 89223324 -31060988 - B4 SINE B4 -3 289 3 3 1265 24 32 0 0 chr13 89223983 89224014 -31060298 + AT_rich Low_complexity Low_complexity 1 31 0 3 1265 270 0 0 0 chr13 89224016 89224046 -31060266 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 3 1265 197 314 82 82 chr13 89224156 89224291 -31060021 + L2c LINE L2 3223 3357 -30 3 1265 291 85 0 0 chr13 89224293 89224340 -31059972 + (TATG)n Simple_repeat Simple_repeat 1 47 0 3 1265 243 293 13 39 chr13 89224537 89224615 -31059697 + ID4 SINE ID 3 78 -5 3 1265 253 203 100 50 chr13 89225173 89225313 -31058999 - Lx9 LINE L1 -41 7603 7457 3 1265 1175 236 45 71 chr13 89227073 89227323 -31056989 + ORR1D1 LTR MaLR 5 242 -132 3 1265 249 33 0 0 chr13 89227323 89227353 -31056959 + (CCTG)n Simple_repeat Simple_repeat 4 33 0 3 1265 1175 236 45 71 chr13 89227353 89227480 -31056832 + ORR1D1 LTR MaLR 243 371 -3 3 1265 5157 239 36 54 chr13 89227484 89228860 -31055452 + ORR1D1-int LTR MaLR 3 1354 -16 3 1265 968 252 108 12 chr13 89228883 89229224 -31055088 + ORR1D1 LTR MaLR 1 374 0 3 1265 378 0 0 0 chr13 89229347 89229389 -31054923 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1265 1200 185 63 0 chr13 89229420 89229642 -31054670 + MTC LTR MaLR 53 288 -133 3 1265 532 339 63 40 chr13 89229638 89229890 -31054422 - MT2A LTR ERVL -110 423 166 3 1265 387 0 0 0 chr13 89229953 89229996 -31054316 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 3 1265 4444 123 48 1 chr13 89230011 89230719 -31053593 - Lx3A LINE L1 0 6981 6241 3 1265 5828 33 0 0 chr13 89232021 89232712 -31051600 + L1Md_T LINE L1 5892 6582 0 3 1265 560 328 48 24 chr13 89233235 89233441 -31050871 + B3 SINE B2 6 216 0 3 1265 33 43 0 0 chr13 89235732 89235779 -31048533 + AT_rich Low_complexity Low_complexity 1 47 0 3 1265 293 444 15 0 chr13 89235949 89236084 -31048228 + B1_Mur1 SINE Alu 2 138 -11 3 1265 329 320 84 32 chr13 89237404 89237559 -31046753 - MIR SINE MIR -26 236 74 3 1265 307 321 58 28 chr13 89237707 89237840 -31046472 + MIRb SINE MIR 13 145 -131 3 1265 26 50 0 0 chr13 89237860 89237900 -31046412 + AT_rich Low_complexity Low_complexity 1 40 0 3 1265 25 0 0 0 chr13 89238000 89238025 -31046287 + AT_rich Low_complexity Low_complexity 1 25 0 3 1265 1191 100 44 11 chr13 89238535 89238717 -31045595 + B2_Mm2 SINE B2 1 188 -7 3 1265 51 58 0 10 chr13 89238943 89239005 -31045307 + AT_rich Low_complexity Low_complexity 1 62 0 3 1265 3811 98 11 16 chr13 89239005 89239574 -31044738 - L1_Mus3 LINE L1 -3 6635 6070 3 1265 51 58 0 10 chr13 89239574 89239615 -31044697 + AT_rich Low_complexity Low_complexity 1 41 0 3 1265 711 319 76 36 chr13 89239627 89240073 -31044239 - L1MA5A LINE L1 -365 5932 5469 3 1265 189 0 0 0 chr13 89240762 89240783 -31043529 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1265 494 168 0 0 chr13 89241607 89241702 -31042610 - L1Md_F2 LINE L1 -1 6581 6487 3 1265 36 23 0 0 chr13 89241744 89241787 -31042525 + AT_rich Low_complexity Low_complexity 1 43 0 3 1265 22 0 0 0 chr13 89242586 89242608 -31041704 + AT_rich Low_complexity Low_complexity 1 22 0 3 1265 4511 137 13 0 chr13 89243972 89244682 -31039630 - Lx2B LINE L1 0 7000 6282 3 1265 46 0 0 0 chr13 89244769 89244815 -31039497 + AT_rich Low_complexity Low_complexity 1 46 0 3 1265 261 139 0 0 chr13 89244981 89245024 -31039288 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1265 478 274 8 34 chr13 89245043 89245160 -31039152 + ID_B1 SINE B4 104 217 -7 3 1265 244 182 73 0 chr13 89245112 89245167 -31039145 + PB1D10 SINE Alu 59 117 0 3 1265 399 179 102 8 chr13 89245986 89246104 -31038208 - Lx9 LINE L1 0 7644 7516 3 1265 342 0 0 0 chr13 89246104 89246142 -31038170 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1265 2096 212 128 25 chr13 89246169 89246686 -31037626 - RMER15 LTR ERVL 0 575 6 3 1265 408 273 53 0 chr13 89246711 89246843 -31037469 - Lx9 LINE L1 -212 7432 7294 3 1265 23 0 0 0 chr13 89247052 89247075 -31037237 + AT_rich Low_complexity Low_complexity 1 23 0 3 1265 338 313 158 8 chr13 89247139 89247494 -31036818 + Charlie4a DNA MER1_type 97 504 -4 3 1265 3789 209 42 25 chr13 89248008 89248969 -31035343 - RLTR25A LTR ERVK 0 1028 7 3 1265 485 243 231 0 chr13 89249061 89249234 -31035078 - B3 SINE B2 0 216 4 3 1265 230 194 103 84 chr13 89249478 89249585 -31034727 + RLTR40 LTR ERVK 332 440 -377 3 1265 5372 69 1 18 chr13 89250281 89251016 -31033296 - L1_Mus1 LINE L1 -1 6566 5844 3 1265 1341 42 6 0 chr13 89251016 89251184 -31033128 + L1_Mus1 LINE L1 5653 5821 -746 3 1265 215 299 0 29 chr13 89252994 89253063 -31031249 + (TATATG)n Simple_repeat Simple_repeat 5 71 0 3 1265 294 380 64 81 chr13 89253187 89253359 -31030953 - B4A SINE B4 -117 175 7 3 1265 204 170 21 21 chr13 89253375 89253423 -31030889 + (TATG)n Simple_repeat Simple_repeat 1 48 0 3 1265 364 301 53 0 chr13 89253476 89253589 -31030723 - RSINE1 SINE B4 -36 129 11 3 1265 246 242 30 0 chr13 89255270 89255336 -31028976 + Lx9 LINE L1 7414 7481 -163 3 1265 330 80 0 0 chr13 89255344 89255394 -31028918 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 3 1265 207 202 25 12 chr13 89255425 89255480 -31028832 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 1265 1211 119 11 5 chr13 89255480 89255666 -31028646 + B2_Mm2 SINE B2 2 188 -7 3 1265 207 202 25 12 chr13 89255666 89255690 -31028622 + (TA)n Simple_repeat Simple_repeat 1 24 0 3 1265 4123 135 20 22 chr13 89255839 89256529 -31027783 + Lx LINE L1 5966 6654 0 3 1265 189 74 0 0 chr13 89256580 89256607 -31027705 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1265 630 230 92 14 chr13 89256632 89256839 -31027473 + Lx9 LINE L1 7421 7643 -1 3 1265 278 311 40 24 chr13 89258020 89258145 -31026167 - MER5B DNA MER1_type -45 133 7 3 1265 1767 82 29 0 chr13 89258179 89258422 -31025890 - L1Md_F2 LINE L1 -418 6164 5915 3 1265 427 143 33 0 chr13 89259159 89259250 -31025062 + (TATG)n Simple_repeat Simple_repeat 3 96 0 3 1266 299 25 0 24 chr13 89263499 89263540 -31020772 + (TA)n Simple_repeat Simple_repeat 2 41 0 3 1266 195 146 0 0 chr13 89264360 89264401 -31019911 + (TA)n Simple_repeat Simple_repeat 2 42 0 3 1266 844 258 47 71 chr13 89264480 89264776 -31019536 - MT2A LTR ERVL -135 398 110 3 1266 621 252 33 59 chr13 89265951 89266103 -31018209 + B3 SINE B2 2 149 -67 3 1266 289 217 50 0 chr13 89266709 89266769 -31017543 - B1F SINE Alu -1 148 86 3 1266 361 95 16 49 chr13 89266782 89266904 -31017408 + A-rich Low_complexity Low_complexity 2 119 0 3 1266 271 290 172 22 chr13 89266905 89267039 -31017273 - ID_B1 SINE B4 -70 154 1 3 1266 1153 181 11 98 chr13 89267300 89267357 -31016955 - ORR1B1 LTR MaLR 0 394 337 3 1266 1741 40 0 13 chr13 89267357 89267586 -31016726 - L1Md_F3 LINE L1 -1 6583 6358 3 1266 1153 181 11 98 chr13 89267586 89267803 -31016509 - ORR1B1 LTR MaLR -58 336 144 3 1266 4067 82 0 5 chr13 89267803 89268369 -31015943 - L1_Mm LINE L1 -2191 3692 3130 3 1266 1383 110 18 9 chr13 89268377 89268598 -31015714 + L1Md_F2 LINE L1 6348 6570 -12 3 1266 809 146 62 0 chr13 89268609 89268753 -31015559 - ORR1B1 LTR MaLR -241 153 1 3 1266 27 29 0 0 chr13 89270469 89270503 -31013809 + AT_rich Low_complexity Low_complexity 1 34 0 3 1266 322 125 0 45 chr13 89271725 89271792 -31012520 + L1Md_F3 LINE L1 6516 6579 -5 3 1266 1097 62 0 33 chr13 89272616 89272767 -31011545 + B1_Mus1 SINE Alu 3 148 0 3 1266 240 111 0 0 chr13 89272767 89272803 -31011509 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1266 44 63 0 0 chr13 89273260 89273339 -31010973 + AT_rich Low_complexity Low_complexity 1 79 0 3 1266 24 53 0 0 chr13 89273461 89273499 -31010813 + AT_rich Low_complexity Low_complexity 1 38 0 3 1266 2394 332 58 26 chr13 89273541 89275059 -31009253 - Lx9 LINE L1 -232 7412 5680 3 1266 25 51 0 0 chr13 89275113 89275152 -31009160 + AT_rich Low_complexity Low_complexity 1 39 0 3 1266 12373 167 24 69 chr13 89275152 89278553 -31005759 - Lx2B LINE L1 -4 6972 3472 3 1266 612 27 0 0 chr13 89278553 89278627 -31005685 + (TTTA)n Simple_repeat Simple_repeat 2 75 0 3 1266 12124 164 17 118 chr13 89278627 89279419 -31004893 - Lx2B LINE L1 -2401 3485 2960 3 1266 1648 98 39 15 chr13 89279419 89279679 -31004633 - L1_Mus2 LINE L1 0 6566 6301 3 1266 12124 164 17 118 chr13 89279679 89280162 -31004150 - Lx2B LINE L1 -2927 2959 2475 3 1266 22 35 0 0 chr13 89280762 89280791 -31003521 + AT_rich Low_complexity Low_complexity 1 29 0 3 1266 4768 156 22 2 chr13 89281067 89281101 -31003211 - L1_Mur2 LINE L1 -1767 4110 4077 3 1266 392 35 0 34 chr13 89281101 89281160 -31003152 + (CAGAGA)n Simple_repeat Simple_repeat 4 60 0 3 1266 4768 156 22 2 chr13 89281160 89281956 -31002356 - L1_Mur2 LINE L1 -1801 4076 3266 3 1266 10049 139 48 14 chr13 89281956 89284421 -30999891 + Lx LINE L1 4111 6649 -5 3 1266 190 193 17 17 chr13 89284580 89284638 -30999674 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1266 625 252 0 0 chr13 89285039 89285166 -30999146 - Lx9 LINE L1 -418 7226 7100 3 1266 452 207 28 14 chr13 89285241 89285383 -30998929 + Lx9 LINE L1 7499 7642 -2 3 1266 432 0 0 0 chr13 89287653 89287701 -30996611 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 3 1266 23 54 0 0 chr13 89288820 89288857 -30995455 + AT_rich Low_complexity Low_complexity 1 37 0 3 1266 430 314 121 0 chr13 89289253 89289377 -30994935 - RSINE1 SINE B4 -24 141 3 3 1266 3695 123 43 0 chr13 89289832 89290391 -30993921 - MT2B2 LTR ERVL -1 583 1 3 1266 842 210 214 16 chr13 89290589 89290841 -30993471 + ORR1B1 LTR MaLR 4 305 -89 3 1266 509 257 55 90 chr13 89290793 89290994 -30993318 + B4 SINE B4 26 219 -73 3 1266 1093 36 0 28 chr13 89290863 89291005 -30993307 + B1_Mus1 SINE Alu 11 148 0 3 1266 272 185 37 0 chr13 89291022 89291076 -30993236 + ORR1B1 LTR MaLR 312 367 0 3 1266 225 312 142 64 chr13 89291077 89291296 -30993016 + MLT1J LTR MaLR 135 370 -142 3 1266 1119 194 26 129 chr13 89291852 89292238 -30992074 - Lx7 LINE L1 -135 7561 7216 3 1266 240 222 19 0 chr13 89292238 89292292 -30992020 + U2 snRNA snRNA 12 66 -122 3 1266 504 258 0 0 chr13 89292390 89292665 -30991647 + (TG)n Simple_repeat Simple_repeat 1 275 0 4 1266 30 69 0 0 chr13 89293119 89293177 -30991135 + AT_rich Low_complexity Low_complexity 1 58 0 4 1266 441 232 122 46 chr13 89293378 89293509 -30990803 - B1_Mur3 SINE Alu -8 141 1 4 1266 4947 114 4 1 chr13 89293859 89294590 -30989722 + Lx LINE L1 5922 6654 0 4 1266 411 73 0 0 chr13 89295943 89295998 -30988314 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1266 2040 160 14 93 chr13 89296316 89296758 -30987554 - MTB_Mm LTR MaLR 0 407 1 4 1266 38376 7 0 1 chr13 89296873 89302646 -30981666 + L1Md_A LINE L1 1 5586 -297 4 1266 9046 1 0 0 chr13 89302646 89303642 -30980670 + L1Md_A LINE L1 5587 6582 0 4 1266 207 0 0 0 chr13 89303846 89303869 -30980443 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1266 417 284 92 31 chr13 89304521 89304717 -30979595 - Tigger7 DNA MER2_type -3 2488 2281 4 1266 324 0 0 0 chr13 89304884 89304920 -30979392 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1266 22 0 0 0 chr13 89304936 89304958 -30979354 + AT_rich Low_complexity Low_complexity 1 22 0 4 1266 302 149 0 29 chr13 89305259 89305328 -30978984 + (TTATA)n Simple_repeat Simple_repeat 2 68 0 4 1266 1350 321 115 29 chr13 89305649 89306347 -30977965 - MER21B LTR ERV1 -63 800 43 4 1266 449 300 40 26 chr13 89306397 89306565 -30977747 + B3A SINE B2 1 163 -53 4 1266 30 45 0 0 chr13 89306566 89306610 -30977702 + AT_rich Low_complexity Low_complexity 1 44 0 4 1266 540 0 0 0 chr13 89307911 89307971 -30976341 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1266 378 0 0 0 chr13 89307971 89308012 -30976300 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1266 237 188 62 0 chr13 89308204 89308252 -30976060 - B1_Mm SINE Alu 0 147 97 4 1266 25 51 0 0 chr13 89308373 89308412 -30975900 + AT_rich Low_complexity Low_complexity 1 39 0 4 1266 2143 246 56 22 chr13 89308665 89309392 -30974920 + L1_Mur3 LINE L1 1506 2257 -3623 4 1266 589 240 81 0 chr13 89309392 89309611 -30974701 + L1_Mur3 LINE L1 3191 3460 -454 4 1266 1759 308 116 34 chr13 89309635 89310702 -30973610 + Charlie1 DNA MER1_type 1491 2645 -136 4 1266 25 0 0 0 chr13 89310708 89310733 -30973579 + AT_rich Low_complexity Low_complexity 1 25 0 4 1266 358 381 12 24 chr13 89310737 89310901 -30973411 - RSINE1 SINE B4 0 165 4 4 1266 3669 64 19 2 chr13 89310989 89311456 -30972856 - MT2C_Mm LTR ERVL 0 475 1 4 1266 653 57 19 9 chr13 89311771 89311877 -30972435 - L1_Mus3 LINE L1 -8 6630 6524 4 1266 566 65 0 0 chr13 89311877 89311954 -30972358 + L1_Mus3 LINE L1 6436 6512 -126 4 1266 552 301 19 37 chr13 89312492 89312706 -30971606 - B3 SINE B2 -6 210 1 4 1266 29 60 0 0 chr13 89312932 89312982 -30971330 + AT_rich Low_complexity Low_complexity 1 50 0 4 1266 331 258 0 19 chr13 89313198 89313360 -30970952 + (CATA)n Simple_repeat Simple_repeat 4 162 0 4 1266 324 0 0 0 chr13 89315296 89315332 -30968980 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1266 441 0 0 0 chr13 89315345 89315394 -30968918 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1266 1188 62 0 0 chr13 89315893 89316039 -30968273 - B1_Mus2 SINE Alu -1 146 1 4 1266 4289 143 43 117 chr13 89317441 89318419 -30965893 - RMER17A2 LTR ERVK 0 906 1 4 1266 397 195 47 6 chr13 89318472 89318642 -30965670 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 4 1266 645 299 56 0 chr13 89318712 89318909 -30965403 + B3 SINE B2 1 208 -8 4 1266 25 0 0 0 chr13 89318960 89318985 -30965327 + AT_rich Low_complexity Low_complexity 1 25 0 4 1266 180 0 0 0 chr13 89318995 89319015 -30965297 + (TGG)n Simple_repeat Simple_repeat 3 22 0 4 1266 201 147 0 0 chr13 89319013 89319047 -30965265 + (TTG)n Simple_repeat Simple_repeat 1 34 0 4 1266 28 0 0 0 chr13 89319079 89319107 -30965205 + AT_rich Low_complexity Low_complexity 1 28 0 4 1266 218 320 0 13 chr13 89319141 89319217 -30965095 + CT-rich Low_complexity Low_complexity 3 77 0 4 1266 900 144 0 27 chr13 89319240 89319425 -30964887 + CT-rich Low_complexity Low_complexity 1 180 0 4 1266 255 61 0 0 chr13 89319613 89319646 -30964666 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1266 307 274 94 0 chr13 89319688 89319805 -30964507 - B1F SINE Alu -17 132 5 4 1266 479 17 17 0 chr13 89321778 89321838 -30962474 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1266 201 378 92 22 chr13 89322942 89323126 -30961186 - MIR SINE MIR 0 262 66 4 1266 26 98 0 0 chr13 89323389 89323471 -30960841 + AT_rich Low_complexity Low_complexity 1 82 0 4 1266 183 291 73 0 chr13 89323525 89323580 -30960732 + MIRm SINE MIR 204 262 -14 4 1266 252 309 81 0 chr13 89323637 89323738 -30960574 + PB1D7 SINE Alu 1 108 -12 4 1266 247 152 22 0 chr13 89324909 89324955 -30959357 - L1_Mur3 LINE L1 -1455 4425 4379 4 1266 4097 92 3 3 chr13 89324949 89325513 -30958799 + L1_Mur1 LINE L1 5314 5877 -9 4 1266 4223 100 22 0 chr13 89325514 89326115 -30958197 + Lx3_Mus LINE L1 6396 7009 0 4 1266 8079 74 10 5 chr13 89326767 89328526 -30955786 - L1Md_F2 LINE L1 -12 6570 4804 4 1266 252 282 0 25 chr13 89328998 89329078 -30955234 - Tigger7 DNA MER2_type -1454 1037 960 4 1266 471 372 105 3 chr13 89329076 89329370 -30954942 - Tigger7 DNA MER2_type -2144 347 24 4 1266 24 0 0 0 chr13 89330131 89330155 -30954157 + AT_rich Low_complexity Low_complexity 1 24 0 4 1266 21 0 0 0 chr13 89330363 89330384 -30953928 + AT_rich Low_complexity Low_complexity 1 21 0 4 1266 543 164 18 46 chr13 89331264 89331373 -30952939 + B1_Mur3 SINE Alu 44 149 0 4 1266 797 127 0 7 chr13 89331545 89331680 -30952632 + (GGGA)n Simple_repeat Simple_repeat 4 137 0 4 1266 2282 227 187 8 chr13 89331681 89332333 -30951979 - Lx9 LINE L1 -570 7074 6306 4 1266 455 308 25 25 chr13 89332447 89332647 -30951665 - Lx9 LINE L1 -1596 6048 5849 4 1266 970 200 177 16 chr13 89332653 89332958 -30951354 + Lx9 LINE L1 7083 7436 -208 4 1266 33 43 0 0 chr13 89332977 89333024 -30951288 + AT_rich Low_complexity Low_complexity 1 47 0 4 1266 1361 237 65 9 chr13 89333231 89333405 -30950907 + MTD LTR MaLR 3 183 -236 4 1266 306 20 39 19 chr13 89333405 89333457 -30950855 + (CAAAA)n Simple_repeat Simple_repeat 1 53 0 4 1266 1361 237 65 9 chr13 89333457 89333604 -30950708 + MTD LTR MaLR 184 342 -77 4 1266 5680 156 72 26 chr13 89333604 89334656 -30949656 - RLTR25A LTR ERVK 0 1103 3 4 1266 351 244 39 0 chr13 89334656 89334731 -30949581 + ORR1E LTR MaLR 276 353 -6 4 1266 328 192 19 0 chr13 89334753 89334857 -30949455 + (TG)n Simple_repeat Simple_repeat 2 107 0 4 1266 22 56 0 0 chr13 89334963 89334999 -30949313 + AT_rich Low_complexity Low_complexity 1 36 0 4 1266 29 28 0 0 chr13 89335036 89335072 -30949240 + AT_rich Low_complexity Low_complexity 1 36 0 4 1266 22 35 0 0 chr13 89337289 89337318 -30946994 + AT_rich Low_complexity Low_complexity 1 29 0 4 1266 309 250 96 11 chr13 89340078 89340256 -30944056 - MER53 DNA hAT 0 193 1 4 1266 2674 52 81 8 chr13 89340957 89341326 -30942986 - MTA_Mm LTR MaLR 0 396 1 4 1266 7667 74 28 4 chr13 89341326 89342398 -30941914 - MTA_Mm-int LTR MaLR 0 1098 1 4 1266 3044 76 2 2 chr13 89342398 89342794 -30941518 - MTA_Mm LTR MaLR 0 396 1 4 1266 286 281 14 14 chr13 89342804 89342945 -30941367 + (CATATA)n Simple_repeat Simple_repeat 1 141 0 4 1266 221 250 0 0 chr13 89342958 89343006 -30941306 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1266 233 280 40 0 chr13 89343334 89343409 -30940903 + LTR81B LTR ERV1? 1267 1344 -49 4 1266 27 29 0 0 chr13 89343810 89343844 -30940468 + AT_rich Low_complexity Low_complexity 1 34 0 4 1266 303 28 0 0 chr13 89345808 89345844 -30938468 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1266 1037 213 4 71 chr13 89346183 89346338 -30937974 + URR1A DNA MER1_type 1 151 -75 4 1266 1350 102 0 5 chr13 89346338 89346526 -30937786 + B2_Mm2 SINE B2 2 188 -7 4 1266 1037 213 4 71 chr13 89346526 89346608 -30937704 + URR1A DNA MER1_type 152 222 -4 4 1266 1593 27 0 21 chr13 89347574 89347765 -30936547 - B2_Mm1a SINE B2 -5 188 2 4 1266 770 308 101 31 chr13 89348096 89348566 -30935746 - Lx5 LINE L1 -42 7418 6496 4 1266 416 272 50 19 chr13 89348574 89348672 -30935640 + Lx6 LINE L1 6643 6745 -715 4 1266 213 39 0 0 chr13 89348672 89348698 -30935614 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 4 1266 416 272 50 19 chr13 89348698 89348760 -30935552 + Lx6 LINE L1 6746 6807 -653 4 1266 234 0 0 0 chr13 89349244 89349270 -30935042 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1266 364 195 19 111 chr13 89349517 89349725 -30934587 + RMER17C LTR ERVK 67 255 -155 4 1266 1271 188 97 50 chr13 89349805 89350146 -30934166 + RLTR23 LTR ERV1 19 375 -55 4 1266 453 351 71 65 chr13 89350152 89350256 -30934056 - MLT1A0 LTR MaLR -25 340 227 4 1266 4045 104 9 0 chr13 89350256 89350833 -30933479 + L1_Mus4 LINE L1 6048 6629 -7 4 1266 450 0 0 0 chr13 89350836 89350886 -30933426 + (GA)n Simple_repeat Simple_repeat 2 51 0 4 1266 453 351 71 65 chr13 89350886 89351115 -30933197 - MLT1A0 LTR MaLR -139 226 4 4 1266 339 319 18 0 chr13 89351451 89351564 -30932748 + MLT1B LTR MaLR 264 378 -12 4 1266 409 309 89 71 chr13 89351962 89352244 -30932068 - B4A SINE B4 -4 288 2 4 1266 190 148 37 0 chr13 89353030 89353084 -30931228 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1266 520 256 29 0 chr13 89353131 89353268 -30931044 - Lx9 LINE L1 -325 7319 7179 4 1266 607 183 140 0 chr13 89353274 89353460 -30930852 + Lx9 LINE L1 7430 7641 -3 4 1266 223 247 24 12 chr13 89353648 89353730 -30930582 + (TA)n Simple_repeat Simple_repeat 1 83 0 4 1266 184 149 43 0 chr13 89353800 89353847 -30930465 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1266 182 371 56 14 chr13 89353937 89354008 -30930304 - MIRc SINE MIR -192 76 3 4 1266 35766 48 15 3 chr13 89355298 89360527 -30923785 + L1Md_T LINE L1 328 5586 -297 4 1266 8195 46 0 0 chr13 89360528 89361523 -30922789 + L1Md_T LINE L1 5588 6582 0 4 1266 22 0 0 0 chr13 89361670 89361692 -30922620 + AT_rich Low_complexity Low_complexity 1 22 0 4 1266 242 233 33 0 chr13 89361865 89361925 -30922387 - MER5A1 DNA MER1_type -4 162 101 4 1266 22 0 0 0 chr13 89363017 89363039 -30921273 + AT_rich Low_complexity Low_complexity 1 22 0 4 1266 192 152 0 0 chr13 89363658 89363691 -30920621 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1266 320 254 0 16 chr13 89364352 89364476 -30919836 + (CATATA)n Simple_repeat Simple_repeat 2 123 0 4 1266 26 64 0 0 chr13 89365330 89365377 -30918935 + AT_rich Low_complexity Low_complexity 1 47 0 4 1266 216 0 0 0 chr13 89367049 89367073 -30917239 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1266 26 74 0 0 chr13 89367189 89367243 -30917069 + AT_rich Low_complexity Low_complexity 1 54 0 5 1266 475 324 0 0 chr13 89368233 89368338 -30915974 - RSINE1 SINE B4 -40 125 21 5 1266 28101 129 26 14 chr13 89368994 89375102 -30909210 - L1_Mus3 LINE L1 0 6638 430 5 1266 258 268 177 9 chr13 89375382 89375495 -30908817 - B1F2 SINE Alu -17 132 1 5 1266 1188 237 94 6 chr13 89376661 89377001 -30907311 - ORR1D1 LTR MaLR 0 374 5 5 1266 500 318 35 26 chr13 89377007 89377233 -30907079 - Lx9 LINE L1 -267 7377 7150 5 1266 3220 189 162 22 chr13 89377233 89378012 -30906300 - RLTR25B LTR ERVK 0 1028 141 5 1266 4305 162 58 41 chr13 89378015 89378956 -30905356 + RMER17B LTR ERVK 2 958 0 5 1266 774 229 13 13 chr13 89378956 89379108 -30905204 - RLTR25B LTR ERVK -876 152 1 5 1266 547 241 96 60 chr13 89379112 89379311 -30905001 - Lx9 LINE L1 -491 7153 6948 5 1266 1216 307 25 25 chr13 89379322 89379769 -30904543 + Lx9 LINE L1 6488 6934 -710 5 1266 270 106 0 0 chr13 89380824 89380871 -30903441 + (TTG)n Simple_repeat Simple_repeat 2 48 0 5 1266 342 360 27 85 chr13 89381153 89381341 -30902971 + B4A SINE B4 3 179 -113 5 1266 354 45 0 0 chr13 89381510 89381554 -30902758 + (CAAAT)n Simple_repeat Simple_repeat 3 46 0 5 1266 1422 319 67 26 chr13 89381689 89382500 -30901812 + RMER1B Other Other 1 506 -560 5 1266 894 239 46 0 chr13 89382477 89382674 -30901638 + RMER1A Other Other 6 211 -819 5 1266 4294 219 85 18 chr13 89382680 89383512 -30900800 + RMER1A Other Other 12 898 -132 5 1266 360 0 0 0 chr13 89383512 89383552 -30900760 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1266 4294 219 85 18 chr13 89383552 89383674 -30900638 + RMER1A Other Other 899 1030 0 5 1266 26 30 0 0 chr13 89384679 89384712 -30899600 + AT_rich Low_complexity Low_complexity 1 33 0 5 1266 278 270 18 83 chr13 89385502 89385611 -30898701 - ORR1E LTR MaLR -257 102 1 5 1266 519 155 0 0 chr13 89385628 89385731 -30898581 + GA-rich Low_complexity Low_complexity 2 104 0 5 1266 41 48 0 0 chr13 89385794 89385856 -30898456 + AT_rich Low_complexity Low_complexity 1 62 0 5 1266 25 0 0 0 chr13 89386729 89386754 -30897558 + AT_rich Low_complexity Low_complexity 1 25 0 5 1266 2840 261 48 95 chr13 89386898 89388011 -30896301 - RMER1B Other Other -2 1064 5 5 1266 26 30 0 0 chr13 89388379 89388412 -30895900 + AT_rich Low_complexity Low_complexity 1 33 0 5 1266 402 274 0 169 chr13 89388485 89388639 -30895673 + B3A SINE B2 71 198 0 5 1266 890 233 24 14 chr13 89389171 89389384 -30894928 + B3 SINE B2 2 216 0 5 1266 353 352 37 65 chr13 89390371 89390612 -30893700 - MLT1E1A LTR MaLR -76 604 341 5 1267 4455 178 51 10 chr13 89393746 89394563 -30889749 - RMER13A LTR ERVK -9 851 1 5 1267 31 26 0 0 chr13 89395226 89395264 -30889048 + AT_rich Low_complexity Low_complexity 1 38 0 5 1267 1223 82 0 21 chr13 89397057 89397244 -30887068 - L1Md_F2 LINE L1 0 6582 6400 5 1267 233 350 25 0 chr13 89397877 89397974 -30886338 + MIRc SINE MIR 59 162 -100 5 1267 509 264 73 32 chr13 89398731 89398970 -30885342 - L1M4 LINE L1 -1368 4778 4527 5 1267 1653 222 55 6 chr13 89399490 89399588 -30884724 - MTC LTR MaLR -41 380 277 5 1267 2773 70 3 5 chr13 89399588 89399962 -30884350 + L1Md_F2 LINE L1 6210 6582 0 5 1267 1653 222 55 6 chr13 89399962 89400225 -30884087 - MTC LTR MaLR -145 276 2 5 1267 249 278 28 0 chr13 89400579 89400651 -30883661 - MTE2b LTR MaLR -6 373 300 5 1267 880 268 28 156 chr13 89400651 89400910 -30883402 - ORR1D1 LTR MaLR 0 374 165 5 1267 948 65 0 0 chr13 89400910 89401034 -30883278 + (GAA)n Simple_repeat Simple_repeat 3 126 0 5 1267 880 268 28 156 chr13 89401034 89401203 -30883109 - ORR1D1 LTR MaLR -210 164 1 5 1267 234 0 0 0 chr13 89401214 89401240 -30883072 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 5 1267 321 26 0 0 chr13 89402233 89402271 -30882041 + (TTC)n Simple_repeat Simple_repeat 2 39 0 5 1267 284 0 0 27 chr13 89402271 89402308 -30882004 + (TTA)n Simple_repeat Simple_repeat 2 37 0 5 1267 498 239 17 34 chr13 89402309 89402426 -30881886 - B1_Mus2 SINE Alu -2 145 31 5 1267 21 57 0 0 chr13 89402745 89402780 -30881532 + AT_rich Low_complexity Low_complexity 1 35 0 5 1267 24926 131 61 5 chr13 89403074 89406542 -30877770 - L1_Mus3 LINE L1 0 6638 2889 5 1267 744 71 0 0 chr13 89406542 89406641 -30877671 + (TTTC)n Simple_repeat Simple_repeat 2 100 0 5 1267 24926 141 56 5 chr13 89406641 89408897 -30875415 - L1_Mus3 LINE L1 -2995 2888 218 5 1267 182 65 65 0 chr13 89408949 89408980 -30875332 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 5 1267 21 36 0 0 chr13 89409022 89409050 -30875262 + AT_rich Low_complexity Low_complexity 1 28 0 5 1267 848 250 34 19 chr13 89409202 89409410 -30874902 - ORR1D1 LTR MaLR 0 374 164 5 1267 417 149 27 49 chr13 89409437 89409620 -30874692 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 5 1267 594 235 113 38 chr13 89409670 89409829 -30874483 - ORR1D1 LTR MaLR -191 183 13 5 1267 775 276 28 23 chr13 89410027 89410242 -30874070 + B3 SINE B2 1 216 0 5 1267 346 337 45 40 chr13 89410711 89410887 -30873425 + L1M5 LINE L1 3891 4067 -2079 5 1267 1196 61 0 0 chr13 89410940 89411087 -30873225 - B1_Mm SINE Alu 0 147 1 5 1267 26 50 0 0 chr13 89411622 89411662 -30872650 + AT_rich Low_complexity Low_complexity 1 40 0 5 1267 622 227 15 8 chr13 89411820 89411953 -30872359 + B1_Mur2 SINE Alu 9 142 -7 5 1267 26 0 0 0 chr13 89412835 89412861 -30871451 + AT_rich Low_complexity Low_complexity 1 26 0 5 1267 216 97 0 0 chr13 89413322 89413353 -30870959 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1267 27 73 0 0 chr13 89413725 89413780 -30870532 + AT_rich Low_complexity Low_complexity 1 55 0 5 1267 2820 254 83 16 chr13 89413793 89414536 -30869776 - Lx6 LINE L1 -14 7446 6654 5 1267 7864 64 4 1 chr13 89414551 89415774 -30868538 - L1_Mus1 LINE L1 -1 6566 5335 5 1267 4296 120 0 6 chr13 89415771 89416427 -30867885 + L1_Mus1 LINE L1 4684 5335 -548 5 1267 3945 245 53 25 chr13 89416421 89417423 -30866889 - Lx6 LINE L1 -796 6664 5635 5 1267 5909 137 32 15 chr13 89418404 89419410 -30864902 - RLTR13D5 LTR ERVK 0 1023 1 5 1267 6197 76 10 92 chr13 89419456 89420428 -30863884 - RLTR13B1 LTR ERVK 0 893 1 5 1267 30 0 0 0 chr13 89421865 89421895 -30862417 + AT_rich Low_complexity Low_complexity 1 30 0 5 1267 249 352 0 0 chr13 89421921 89422012 -30862300 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 5 1267 22 0 0 0 chr13 89422015 89422037 -30862275 + AT_rich Low_complexity Low_complexity 1 22 0 5 1267 1996 182 11 16 chr13 89422185 89422549 -30861763 + ORR1B2 LTR MaLR 3 364 -3 5 1267 221 119 24 0 chr13 89423067 89423109 -30861203 + (TTA)n Simple_repeat Simple_repeat 3 45 0 5 1267 1295 263 117 17 chr13 89423623 89423983 -30860329 + MTD LTR MaLR 7 402 -17 5 1267 28 91 0 0 chr13 89424059 89424136 -30860176 + AT_rich Low_complexity Low_complexity 1 77 0 5 1267 22 94 0 0 chr13 89424307 89424371 -30859941 + AT_rich Low_complexity Low_complexity 1 64 0 5 1267 447 229 28 28 chr13 89425473 89425617 -30858695 - Lx9 LINE L1 -2 7642 7499 5 1267 672 64 0 0 chr13 89427668 89427762 -30856550 + (TG)n Simple_repeat Simple_repeat 1 94 0 5 1267 304 318 47 16 chr13 89429228 89429356 -30854956 - Lx7 LINE L1 0 7696 7565 5 1267 213 140 0 23 chr13 89429380 89429443 -30854869 + (CAAA)n Simple_repeat Simple_repeat 1 61 0 5 1267 27 0 0 0 chr13 89429922 89429949 -30854363 + AT_rich Low_complexity Low_complexity 1 27 0 5 1267 387 310 35 26 chr13 89431088 89431204 -30853108 + PB1D10 SINE Alu 1 117 0 5 1267 291 276 86 0 chr13 89431398 89431503 -30852809 - L1M5 LINE L1 -3523 2623 2510 5 1267 25 65 0 0 chr13 89431583 89431629 -30852683 + AT_rich Low_complexity Low_complexity 1 46 0 5 1267 24 0 0 0 chr13 89431938 89431962 -30852350 + AT_rich Low_complexity Low_complexity 1 24 0 5 1267 1314 185 12 8 chr13 89432116 89432361 -30851951 - ORR1B2 LTR MaLR -7 360 115 5 1267 1453 57 5 0 chr13 89432447 89432639 -30851673 + L1Md_F2 LINE L1 6374 6566 -16 5 1267 369 0 0 0 chr13 89433289 89433330 -30850982 + (TA)n Simple_repeat Simple_repeat 1 41 0 5 1267 243 0 0 0 chr13 89433330 89433356 -30850956 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1267 249 333 59 44 chr13 89435277 89435412 -30848900 + B1F SINE Alu 5 141 -8 5 1267 186 115 38 19 chr13 89436024 89436077 -30848235 + GA-rich Low_complexity Low_complexity 3 56 0 5 1267 1287 182 189 65 chr13 89436425 89436659 -30847653 + RMER6C LTR ERVK 2 287 -403 5 1267 3266 41 5 0 chr13 89436659 89437051 -30847261 - MTA_Mm LTR MaLR -2 394 1 5 1267 1287 182 189 65 chr13 89437051 89437245 -30847067 + RMER6C LTR ERVK 288 483 -207 5 1267 4056 143 30 6 chr13 89437245 89437907 -30846405 - RLTR33 LTR ERVK 0 678 1 5 1267 1460 95 5 5 chr13 89438085 89438297 -30846015 + RMER6C LTR ERVK 479 690 0 5 1267 312 326 75 11 chr13 89438650 89438743 -30845569 + RSINE1 SINE B4 53 151 -14 5 1267 3668 148 30 28 chr13 89439042 89439718 -30844594 - Lx4A LINE L1 -2 7056 6380 5 1267 487 274 47 94 chr13 89439753 89439902 -30844410 + B4A SINE B4 151 292 0 5 1267 1822 223 50 9 chr13 89440450 89440844 -30843468 - MTD LTR MaLR -16 403 11 5 1267 2404 215 65 13 chr13 89440934 89441076 -30843236 - Lx9 LINE L1 -8 7636 7478 5 1267 446 108 14 0 chr13 89441076 89441150 -30843162 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1267 2404 215 65 13 chr13 89441150 89441602 -30842710 - Lx9 LINE L1 -167 7477 7012 5 1267 1326 202 7 24 chr13 89441600 89441894 -30842418 + Lx9 LINE L1 6679 6967 -677 5 1267 1166 68 0 0 chr13 89442439 89442585 -30841727 + B1_Mus1 SINE Alu 1 146 -2 5 1267 184 120 20 20 chr13 89442586 89442637 -30841675 + (CAAA)n Simple_repeat Simple_repeat 1 51 0 5 1267 487 107 0 6 chr13 89444601 89444694 -30839618 - Lx3A LINE L1 -1019 5990 5902 5 1267 29 0 0 0 chr13 89444858 89444887 -30839425 + AT_rich Low_complexity Low_complexity 1 29 0 5 1267 272 248 38 9 chr13 89444920 89445026 -30839286 - Lx2B LINE L1 -1 6999 6891 5 1267 26 30 0 0 chr13 89445448 89445481 -30838831 + AT_rich Low_complexity Low_complexity 1 33 0 5 1267 24 0 0 0 chr13 89446410 89446434 -30837878 + AT_rich Low_complexity Low_complexity 1 24 0 5 1267 381 96 76 119 chr13 89448048 89448166 -30836146 - Lx9 LINE L1 -49 7595 7483 5 1267 753 167 21 7 chr13 89448202 89448347 -30835965 + Lx9 LINE L1 6911 7057 -587 5 1267 370 244 20 88 chr13 89448388 89448490 -30835822 + PB1D10 SINE Alu 1 103 -17 6 1267 208 70 23 23 chr13 89449972 89450016 -30834296 + (CAAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1267 271 329 53 40 chr13 89450276 89450428 -30833884 - MER77 LTR ERVL -12 595 442 6 1267 25 0 0 0 chr13 89450848 89450873 -30833439 + AT_rich Low_complexity Low_complexity 1 25 0 6 1267 203 205 63 13 chr13 89451605 89451684 -30832628 + (TTTAA)n Simple_repeat Simple_repeat 2 84 0 6 1267 535 277 15 0 chr13 89452778 89452908 -30831404 + RSINE1 SINE B4 3 134 -31 6 1267 773 76 34 45 chr13 89452941 89453120 -30831192 + (CAGAGA)n Simple_repeat Simple_repeat 2 178 0 6 1267 804 275 53 3 chr13 89453563 89453848 -30830464 - Lx9 LINE L1 -149 7495 7197 6 1267 501 183 19 19 chr13 89454254 89454410 -30829902 + (TA)n Simple_repeat Simple_repeat 2 157 0 6 1267 263 337 30 10 chr13 89454508 89454607 -30829705 + PB1D10 SINE Alu 9 109 -8 6 1267 22 0 0 0 chr13 89455709 89455731 -30828581 + AT_rich Low_complexity Low_complexity 1 22 0 6 1267 47 92 0 0 chr13 89455815 89455946 -30828366 + AT_rich Low_complexity Low_complexity 1 131 0 6 1267 3071 153 9 9 chr13 89456004 89456544 -30827768 - Lx3A LINE L1 -3 6978 6439 6 1267 3143 78 57 0 chr13 89456544 89456980 -30827332 - L1_Mur1 LINE L1 -138 5748 5288 6 1267 540 81 0 0 chr13 89458019 89458093 -30826219 + (TAG)n Simple_repeat Simple_repeat 1 74 0 6 1267 596 286 88 16 chr13 89458093 89458285 -30826027 - B3 SINE B2 -10 206 1 6 1267 206 247 0 13 chr13 89458518 89458596 -30825716 + CT-rich Low_complexity Low_complexity 3 79 0 6 1267 21 0 0 0 chr13 89458747 89458768 -30825544 + AT_rich Low_complexity Low_complexity 1 21 0 6 1267 741 327 76 36 chr13 89458770 89459046 -30825266 + B4 SINE B4 6 292 0 6 1267 21 0 0 0 chr13 89459147 89459168 -30825144 + AT_rich Low_complexity Low_complexity 1 21 0 6 1267 22 0 0 0 chr13 89459987 89460009 -30824303 + AT_rich Low_complexity Low_complexity 1 22 0 6 1267 36 40 0 0 chr13 89461157 89461207 -30823105 + AT_rich Low_complexity Low_complexity 1 50 0 6 1267 24 32 0 0 chr13 89462274 89462305 -30822007 + AT_rich Low_complexity Low_complexity 1 31 0 6 1267 1480 59 43 0 chr13 89463218 89463404 -30820908 + B2_Mm2 SINE B2 1 194 -1 6 1267 441 0 0 0 chr13 89463489 89463538 -30820774 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1267 4082 194 43 35 chr13 89464368 89464949 -30819363 - Lx2B LINE L1 -2 6998 6397 6 1267 209 33 33 0 chr13 89464949 89464979 -30819333 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 6 1267 4082 194 43 35 chr13 89464979 89465286 -30819026 - Lx2B LINE L1 -604 6396 6103 6 1267 21 36 0 0 chr13 89465668 89465696 -30818616 + AT_rich Low_complexity Low_complexity 1 28 0 6 1267 21 0 0 0 chr13 89465728 89465749 -30818563 + AT_rich Low_complexity Low_complexity 1 21 0 6 1267 22 35 0 0 chr13 89466339 89466368 -30817944 + AT_rich Low_complexity Low_complexity 1 29 0 6 1267 21 0 0 0 chr13 89466395 89466416 -30817896 + AT_rich Low_complexity Low_complexity 1 21 0 6 1267 436 317 89 22 chr13 89467515 89467756 -30816556 + Tigger5 DNA MER2_type 22 256 -2150 6 1267 2016 151 20 17 chr13 89467756 89468113 -30816199 + RLTR15 LTR ERVK 2 359 0 6 1267 288 248 64 70 chr13 89468113 89468206 -30816106 + Tigger5 DNA MER2_type 2194 2284 -122 6 1267 1457 215 10 16 chr13 89468301 89468604 -30815708 - Lx9 LINE L1 -631 7013 6713 6 1267 730 193 152 0 chr13 89468591 89468788 -30815524 + Lx9 LINE L1 7378 7604 -40 6 1267 467 107 0 12 chr13 89468789 89468874 -30815438 + (GGGGA)n Simple_repeat Simple_repeat 5 88 0 6 1267 726 337 110 11 chr13 89468921 89469185 -30815127 + B4 SINE B4 1 290 -2 6 1267 347 119 15 0 chr13 89469189 89469256 -30815056 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 1267 21 57 0 0 chr13 89469531 89469566 -30814746 + AT_rich Low_complexity Low_complexity 1 35 0 6 1267 1872 31 45 0 chr13 89470091 89470315 -30813997 + L1Md_F2 LINE L1 6330 6563 -19 6 1267 29 0 0 0 chr13 89470315 89470344 -30813968 + AT_rich Low_complexity Low_complexity 1 29 0 6 1267 21 0 0 0 chr13 89470467 89470488 -30813824 + AT_rich Low_complexity Low_complexity 1 21 0 6 1267 317 230 0 10 chr13 89471221 89471322 -30812990 + (TA)n Simple_repeat Simple_repeat 2 101 0 6 1267 6372 138 5 6 chr13 89471503 89472542 -30811770 - L1_Mus3 LINE L1 -464 5419 4382 6 1267 7573 95 4 10 chr13 89472541 89473730 -30810582 + L1_Mus3 LINE L1 5451 6631 -7 6 1267 1005 107 0 0 chr13 89473744 89473893 -30810419 + (GAAA)n Simple_repeat Simple_repeat 4 152 0 6 1267 2125 17 0 0 chr13 89474379 89474620 -30809692 - L1Md_T LINE L1 -463 6119 5879 6 1267 266 25 0 0 chr13 89474614 89474654 -30809658 + L1Md_T LINE L1 6543 6582 0 6 1267 23 33 0 0 chr13 89474701 89474731 -30809581 + AT_rich Low_complexity Low_complexity 1 30 0 6 1267 351 0 0 0 chr13 89475413 89475452 -30808860 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1267 215 276 73 45 chr13 89476505 89476615 -30807697 - MIR SINE MIR -4 258 146 6 1267 265 325 96 36 chr13 89478034 89478200 -30806112 - MLT1J LTR MaLR -5 507 332 6 1267 1964 129 27 59 chr13 89480790 89481128 -30803184 + ORR1A2 LTR MaLR 1 327 0 6 1267 510 318 75 50 chr13 89481177 89481524 -30802788 + ORR1E LTR MaLR 1 379 0 6 1267 403 321 62 55 chr13 89481755 89481900 -30802412 + MTEa LTR MaLR 5 150 -229 6 1267 299 307 184 32 chr13 89481900 89481940 -30802372 + MLT2B3 LTR ERVL 5 217 -337 6 1267 566 264 98 11 chr13 89482486 89482670 -30801642 - MLT2B4 LTR ERVL -356 200 1 6 1267 379 277 52 71 chr13 89482680 89482890 -30801422 - ERVL-B4-int LTR ERVL -10 5704 5499 6 1267 729 88 0 0 chr13 89482899 89483001 -30801311 + (TA)n Simple_repeat Simple_repeat 2 103 0 6 1267 1066 92 0 0 chr13 89483250 89483391 -30800921 + B1_Mm SINE Alu 1 141 -6 6 1267 21 0 0 0 chr13 89483391 89483412 -30800900 + AT_rich Low_complexity Low_complexity 1 21 0 6 1267 209 98 24 0 chr13 89484945 89484986 -30799326 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 6 1267 423 0 0 0 chr13 89484986 89485033 -30799279 + (CATA)n Simple_repeat Simple_repeat 1 47 0 6 1267 236 224 102 9 chr13 89485097 89485205 -30799107 - Lx6 LINE L1 -28 7432 7315 6 1267 801 114 0 0 chr13 89485205 89485328 -30798984 + (TA)n Simple_repeat Simple_repeat 1 123 0 6 1267 216 97 0 0 chr13 89485345 89485376 -30798936 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 6 1267 252 72 35 18 chr13 89486672 89486729 -30797583 + (CAAA)n Simple_repeat Simple_repeat 2 59 0 6 1267 1072 223 30 63 chr13 89487196 89487250 -30797062 + L1_Mur3 LINE L1 892 940 -6788 6 1267 981 147 44 22 chr13 89487250 89487431 -30796881 + B2_Mm2 SINE B2 2 186 -9 6 1267 1072 223 30 63 chr13 89487431 89487707 -30796605 + L1_Mur3 LINE L1 941 1211 -6517 6 1267 3494 195 27 11 chr13 89487922 89488758 -30795554 + L1_Mur3 LINE L1 1170 2023 -3854 6 1267 273 163 0 0 chr13 89488760 89488809 -30795503 + L1_Mur3 LINE L1 5130 5178 -699 6 1267 905 163 41 0 chr13 89488811 89488958 -30795354 - B2_Mm2 SINE B2 -41 154 2 6 1267 252 72 35 18 chr13 89489479 89489536 -30794776 + (TTTG)n Simple_repeat Simple_repeat 2 59 0 6 1267 300 27 0 0 chr13 89490832 89490869 -30793443 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 6 1267 195 146 0 0 chr13 89490872 89490913 -30793399 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 1267 351 192 0 0 chr13 89490912 89490985 -30793327 + (TA)n Simple_repeat Simple_repeat 2 74 0 6 1267 1119 82 0 0 chr13 89491046 89491193 -30793119 - B1_Mm SINE Alu 0 147 1 6 1267 351 310 78 53 chr13 89492178 89492423 -30791889 + B4A SINE B4 6 256 -36 6 1267 763 176 0 40 chr13 89493072 89493220 -30791092 + B1_Mur4 SINE Alu 2 143 -7 6 1267 331 183 0 24 chr13 89493225 89493309 -30791003 + GA-rich Low_complexity Low_complexity 3 84 0 6 1267 3612 35 51 2 chr13 89493414 89493867 -30790445 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1267 351 355 38 19 chr13 89494108 89494266 -30790046 + RSINE1 SINE B4 3 163 -2 6 1267 404 299 74 7 chr13 89494492 89494627 -30789685 + MER5B DNA MER1_type 1 144 -34 6 1267 181 194 0 27 chr13 89496017 89496054 -30788258 - MIR SINE MIR -148 114 79 6 1267 33 56 0 0 chr13 89496182 89496236 -30788076 + AT_rich Low_complexity Low_complexity 1 54 0 6 1267 352 205 38 25 chr13 89496304 89496384 -30787928 + MTE2b LTR MaLR 7 87 -292 6 1267 572 27 14 0 chr13 89496424 89496498 -30787814 + (GTTTG)n Simple_repeat Simple_repeat 4 78 0 6 1267 204 182 0 0 chr13 89496545 89496589 -30787723 + (TTGG)n Simple_repeat Simple_repeat 4 47 0 6 1267 519 332 106 112 chr13 89496589 89496866 -30787446 + MT2A LTR ERVL 83 331 -202 6 1267 2623 45 45 0 chr13 89496866 89497197 -30787115 + ORR1A0 LTR MaLR 1 346 0 6 1267 519 332 106 112 chr13 89497197 89497373 -30786939 + MT2A LTR ERVL 332 532 -1 6 1267 23 86 0 0 chr13 89497634 89497692 -30786620 + AT_rich Low_complexity Low_complexity 1 58 0 6 1267 24 0 0 0 chr13 89498569 89498593 -30785719 + AT_rich Low_complexity Low_complexity 1 24 0 6 1267 714 354 43 69 chr13 89498758 89499222 -30785090 - MLT1D LTR MaLR -49 456 5 6 1267 411 358 75 23 chr13 89499310 89499572 -30784740 - MLT1E1A LTR MaLR -13 667 279 6 1267 403 323 77 0 chr13 89499772 89499902 -30784410 + ID_B1 SINE B4 85 224 0 6 1267 354 149 0 0 chr13 89500128 89500215 -30784097 + (TA)n Simple_repeat Simple_repeat 1 87 0 1 1267 202 210 77 36 chr13 89500335 89500503 -30783809 + (TAGA)n Simple_repeat Simple_repeat 4 178 0 2 1267 932 250 9 19 chr13 89502805 89503021 -30781291 + B3 SINE B2 1 214 -2 3 1267 231 103 0 0 chr13 89503150 89503189 -30781123 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1267 2305 11 0 0 chr13 89503191 89503452 -30780860 - L1Md_A LINE L1 0 6582 6322 5 1267 1450 34 39 0 chr13 89503500 89503679 -30780633 - L1Md_A LINE L1 -555 6027 5842 5 1267 3886 62 0 50 chr13 89503679 89504222 -30780090 + L1Md_F2 LINE L1 6055 6570 -12 6 1267 318 368 89 94 chr13 89504423 89504804 -30779508 + Arthur1 DNA Tip100 1 379 -3568 7 1267 446 296 103 37 chr13 89504928 89505142 -30779170 + Arthur1 DNA Tip100 3419 3646 -301 7 1267 22 0 0 0 chr13 89505294 89505316 -30778996 + AT_rich Low_complexity Low_complexity 1 22 0 8 1267 375 121 0 0 chr13 89505853 89505911 -30778401 + (TA)n Simple_repeat Simple_repeat 2 59 0 9 1267 324 0 0 0 chr13 89505917 89505953 -30778359 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 1267 5289 88 16 1 chr13 89507583 89508312 -30776000 - L1_Mus1 LINE L1 -29 6538 5799 1 1267 591 326 62 6 chr13 89508393 89508572 -30775740 - MER5A DNA MER1_type 0 189 1 1 1267 211 303 0 44 chr13 89508612 89508726 -30775586 + (ATG)n Simple_repeat Simple_repeat 3 111 0 1 1267 515 225 20 65 chr13 89508728 89508928 -30775384 - HAL1-2a_MD LINE L1 -503 2521 2331 1 1267 248 330 0 11 chr13 89508931 89509023 -30775289 + (ATG)n Simple_repeat Simple_repeat 3 93 0 1 1267 882 192 83 34 chr13 89509646 89509851 -30774461 + Lx5 LINE L1 6779 6993 -57 1 1267 273 351 85 5 chr13 89510897 89511086 -30773226 - L2a LINE L2 -37 3389 3186 1 1267 24 0 0 0 chr13 89511859 89511883 -30772429 + AT_rich Low_complexity Low_complexity 1 24 0 1 1267 379 231 34 0 chr13 89512003 89512150 -30772162 + (TA)n Simple_repeat Simple_repeat 1 152 0 1 1267 38 0 0 0 chr13 89512233 89512271 -30772041 + AT_rich Low_complexity Low_complexity 1 38 0 2 1267 258 213 58 22 chr13 89512562 89512701 -30771611 + (TA)n Simple_repeat Simple_repeat 1 144 0 2 1267 242 269 221 29 chr13 89512841 89513013 -30771299 + B3 SINE B2 4 208 -8 2 1267 207 344 60 3 chr13 89514079 89514220 -30770092 + MIRm SINE MIR 60 209 -59 2 1267 394 363 55 23 chr13 89516059 89516279 -30768033 - MIR SINE MIR -30 232 6 2 1267 283 291 62 18 chr13 89516347 89516459 -30767853 + Charlie17a DNA MER1_type 3 119 -100 2 1267 259 338 78 0 chr13 89516929 89517006 -30767306 - LTR86A2 LTR ERVL -10 498 416 2 1267 2074 163 74 2 chr13 89518003 89518396 -30765916 - MTC LTR MaLR 0 421 1 2 1267 818 243 76 74 chr13 89518785 89519268 -30765044 + L1_Mur3 LINE L1 1219 1685 -4195 2 1267 204 0 26 53 chr13 89519268 89519306 -30765006 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 2 1267 818 243 76 74 chr13 89519306 89519373 -30764939 + L1_Mur3 LINE L1 1686 1769 -4111 2 1267 468 93 0 0 chr13 89519540 89519615 -30764697 + (TG)n Simple_repeat Simple_repeat 2 76 0 3 1267 803 223 76 28 chr13 89520389 89520638 -30763674 - Lx7 LINE L1 0 7696 7436 3 1267 614 230 22 7 chr13 89520637 89520773 -30763539 + Lx7 LINE L1 7046 7183 -513 3 1267 255 342 54 90 chr13 89520777 89520944 -30763368 - RLTR8 LTR ERVK 0 365 205 3 1267 713 244 0 35 chr13 89521206 89521380 -30762932 + Lx7 LINE L1 7187 7354 -342 3 1267 309 220 9 18 chr13 89521380 89521491 -30762821 + CT-rich Low_complexity Low_complexity 1 110 0 3 1267 261 0 0 0 chr13 89521511 89521540 -30762772 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 3 1267 454 169 0 0 chr13 89521572 89521649 -30762663 + Lx7 LINE L1 7390 7466 -230 3 158 4343 204 19 39 chr13 89522047 89522968 -30761344 + RMER13B LTR ERVK 5 906 -2 3 1268 1321 186 84 87 chr13 89523271 89523618 -30760694 - RLTR44B LTR ERVK -9 440 95 3 1268 1506 114 0 8 chr13 89523618 89523944 -30760368 - RLTR44-int LTR ERVK -1787 1025 816 3 1268 313 179 0 0 chr13 89523957 89524013 -30760299 - RLTR44-int LTR ERVK -2756 56 1 3 1268 1161 133 6 0 chr13 89524064 89524244 -30760068 - RLTR44-int LTR ERVK -2618 194 14 3 1268 1825 174 77 75 chr13 89524259 89524688 -30759624 - RLTR44B LTR ERVK -11 438 9 3 1268 290 279 12 12 chr13 89524860 89524940 -30759372 + B4 SINE B4 5 84 -208 3 1268 252 184 0 0 chr13 89524946 89524995 -30759317 + GA-rich Low_complexity Low_complexity 2 50 0 4 1268 646 303 71 0 chr13 89524995 89525193 -30759119 + B4 SINE B4 81 292 0 3 1268 205 291 0 0 chr13 89525751 89525806 -30758506 + L3 LINE CR1 3789 3843 -646 4 1268 1671 198 143 3 chr13 89526171 89526541 -30757771 + Lx5 LINE L1 6626 7047 -3 4 1268 270 0 0 0 chr13 89526609 89526639 -30757673 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 4 1268 561 68 0 0 chr13 89526997 89527071 -30757241 + (GGA)n Simple_repeat Simple_repeat 3 76 0 4 1268 357 280 100 0 chr13 89527119 89527219 -30757093 + Lx9 LINE L1 6664 6773 -871 4 1268 1487 310 42 32 chr13 89527234 89527861 -30756451 + Lx9 LINE L1 6859 7491 -153 4 1268 200 216 0 0 chr13 89528079 89528116 -30756196 + (CATA)n Simple_repeat Simple_repeat 2 38 0 4 1268 3341 196 49 52 chr13 89528406 89529305 -30755007 - Lx7 LINE L1 0 7696 6874 4 1268 585 280 60 0 chr13 89529302 89529470 -30754842 - Lx7 LINE L1 -7002 726 549 4 1268 5914 124 17 0 chr13 89529821 89530921 -30753391 - Lx LINE L1 -610 6044 4925 4 1268 3347 135 35 26 chr13 89530919 89531488 -30752824 + Lx LINE L1 6037 6610 -44 4 1268 23 0 0 0 chr13 89531499 89531522 -30752790 + AT_rich Low_complexity Low_complexity 1 23 0 4 1268 365 348 83 49 chr13 89531588 89532036 -30752276 - MT2A LTR ERVL -9 524 62 5 1268 300 316 76 16 chr13 89531955 89532097 -30752215 - MTEa LTR MaLR -229 150 7 5 1268 297 51 0 0 chr13 89532122 89532161 -30752151 + (GA)n Simple_repeat Simple_repeat 1 39 0 5 1268 744 237 97 0 chr13 89533118 89533304 -30751008 + B3 SINE B2 2 205 -11 5 1268 700 234 7 0 chr13 89535247 89535384 -30748928 + Lx9 LINE L1 6583 6720 -924 5 1268 522 0 0 0 chr13 89535414 89535472 -30748840 + (GA)n Simple_repeat Simple_repeat 1 58 0 5 1268 567 0 0 0 chr13 89535730 89535793 -30748519 + (GAAAA)n Simple_repeat Simple_repeat 2 64 0 5 1268 490 330 33 6 chr13 89536185 89536365 -30747947 + MER5A DNA MER1_type 4 188 -1 5 1268 298 354 65 52 chr13 89536677 89536832 -30747480 + MTEa LTR MaLR 182 338 -41 5 1268 375 289 139 24 chr13 89536837 89537046 -30747266 - Lx8 LINE L1 -10 7463 7231 5 1268 1275 279 35 0 chr13 89537028 89537344 -30746968 - Lx8 LINE L1 -810 6663 6337 5 1268 235 157 38 38 chr13 89537373 89537426 -30746886 - MTD LTR MaLR -14 405 353 6 1268 451 235 209 32 chr13 89537435 89537593 -30746719 - MTD LTR MaLR -193 226 41 6 1268 328 75 61 24 chr13 89537595 89537677 -30746635 + A-rich Low_complexity Low_complexity 2 86 0 6 1268 297 275 183 23 chr13 89537691 89537866 -30746446 - Lx8 LINE L1 -1148 6325 6123 5 1268 1441 256 69 33 chr13 89537910 89538302 -30746010 - MTD LTR MaLR -1 418 13 6 1268 204 125 0 0 chr13 89538302 89538334 -30745978 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1268 429 186 82 10 chr13 89538339 89538437 -30745875 - MTD-int LTR MaLR -7 1251 1147 6 1268 1320 179 20 126 chr13 89538465 89538822 -30745490 - Lx5 LINE L1 -4 7046 6728 6 1268 323 240 80 90 chr13 89538818 89539006 -30745306 + Lx5 LINE L1 5977 6162 -888 6 1268 181 334 244 25 chr13 89539400 89539793 -30744519 - L2a LINE L2 -1 3425 2947 6 1268 343 280 32 48 chr13 89539807 89539931 -30744381 + MTE2b LTR MaLR 252 373 -6 6 1268 270 307 22 11 chr13 89540113 89540202 -30744110 - MIRc SINE MIR -142 126 37 6 1268 24 32 0 0 chr13 89541596 89541627 -30742685 + AT_rich Low_complexity Low_complexity 1 31 0 6 1268 232 314 169 63 chr13 89541874 89542081 -30742231 + Charlie1a DNA MER1_type 1 229 -1226 7 1268 736 361 85 35 chr13 89542258 89542978 -30741334 + Charlie1a DNA MER1_type 460 1215 -240 7 1268 4150 160 51 22 chr13 89543017 89543818 -30740494 - Lx3C LINE L1 -4 6972 6149 7 1268 1188 146 5 27 chr13 89543821 89544040 -30740272 - L1_Mur2 LINE L1 -1311 4566 4353 7 1268 2012 93 24 3 chr13 89544040 89544331 -30739981 - L1_Mus4 LINE L1 -4 6632 6336 7 1268 265 340 148 36 chr13 89544336 89544586 -30739726 - MLT1I LTR MaLR -121 290 13 7 1268 271 358 0 31 chr13 89544740 89544838 -30739474 - PB1D10 SINE Alu -11 106 12 7 1268 213 322 17 0 chr13 89544790 89544849 -30739463 - ID_B1 SINE B4 -84 140 81 7 1268 491 272 45 45 chr13 89544926 89545126 -30739186 + LTR82A LTR ERVL 189 388 -484 7 1268 262 268 129 77 chr13 89545182 89545376 -30738936 + LTR82B Low_complexity ERVL 493 696 -134 7 1268 504 300 44 11 chr13 89546497 89546679 -30737633 - MLT1B LTR MaLR 0 390 203 7 1268 1073 52 34 6 chr13 89548091 89548266 -30736046 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 8 1268 21 36 0 0 chr13 89549468 89549496 -30734816 + AT_rich Low_complexity Low_complexity 1 28 0 8 1268 618 325 154 22 chr13 89550749 89551152 -30733160 - Lx8 LINE L1 -967 6506 6051 8 1268 1044 111 0 7 chr13 89551906 89552051 -30732261 - B1_Mus1 SINE Alu 0 148 5 8 1268 447 174 0 0 chr13 89552241 89552327 -30731985 + A-rich Low_complexity Low_complexity 1 86 0 8 1268 543 53 0 0 chr13 89554089 89554164 -30730148 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 8 1268 832 333 83 9 chr13 89555820 89556263 -30728049 - Lx8 LINE L1 -44 7429 6954 8 1268 654 79 0 0 chr13 89556477 89556566 -30727746 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 8 1268 926 364 44 9 chr13 89556572 89557027 -30727285 + Lx8 LINE L1 6204 6674 -799 8 1268 644 81 0 0 chr13 89557219 89557305 -30727007 + B1_Mus2 SINE Alu 57 142 -5 8 1268 366 134 0 0 chr13 89557313 89557380 -30726932 + (A)n Simple_repeat Simple_repeat 1 67 0 9 1268 37 23 0 0 chr13 89557590 89557634 -30726678 + AT_rich Low_complexity Low_complexity 1 44 0 9 1268 338 231 112 64 chr13 89558050 89558175 -30726137 + RSINE1 SINE B4 13 143 -22 9 1268 279 54 0 0 chr13 89558180 89558217 -30726095 + (CA)n Simple_repeat Simple_repeat 2 38 0 9 1268 27 0 0 0 chr13 89558223 89558250 -30726062 + AT_rich Low_complexity Low_complexity 1 27 0 9 1268 453 90 0 0 chr13 89558408 89558475 -30725837 + (GAGAA)n Simple_repeat Simple_repeat 4 70 0 9 1268 183 129 31 31 chr13 89558790 89558854 -30725458 + T-rich Low_complexity Low_complexity 2 65 0 9 1268 218 98 0 47 chr13 89558943 89558986 -30725326 + (TTTTC)n Simple_repeat Simple_repeat 3 43 0 9 1268 5986 102 18 17 chr13 89558996 89559871 -30724441 - Lx LINE L1 -22 6632 5757 9 1268 894 257 139 38 chr13 89559890 89560234 -30724078 - MTE2b LTR MaLR 0 379 1 9 1268 232 378 11 11 chr13 89560424 89560515 -30723797 - MLT1E2 LTR MaLR -183 444 354 1 1268 24 67 0 0 chr13 89560723 89560768 -30723544 + AT_rich Low_complexity Low_complexity 1 45 0 1 1268 389 156 22 0 chr13 89561745 89561835 -30722477 + (TATG)n Simple_repeat Simple_repeat 3 94 0 1 1268 4880 90 3 3 chr13 89562285 89562966 -30721346 + L1_Mus4 LINE L1 5950 6630 -6 1 1268 269 26 0 26 chr13 89563469 89563508 -30720804 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1268 394 298 54 26 chr13 89563537 89563859 -30720453 - Lx7 LINE L1 -382 5918 5583 1 1268 293 141 35 12 chr13 89564484 89564570 -30719742 + T-rich Low_complexity Low_complexity 2 89 0 1 1268 21 0 0 0 chr13 89564595 89564616 -30719696 + AT_rich Low_complexity Low_complexity 1 21 0 1 1268 23 78 0 0 chr13 89564626 89564677 -30719635 + AT_rich Low_complexity Low_complexity 1 51 0 1 1268 234 364 125 7 chr13 89565558 89565846 -30718466 - L2 LINE L2 -2397 1022 701 1 1268 434 330 87 22 chr13 89565999 89566228 -30718084 + MIR SINE MIR 17 260 -2 1 1268 21 36 0 0 chr13 89566952 89566980 -30717332 + AT_rich Low_complexity Low_complexity 1 28 0 1 1268 478 279 136 0 chr13 89569088 89569228 -30715084 + MTEb LTR MaLR 209 367 -12 1 1268 252 291 34 23 chr13 89569760 89569848 -30714464 - PB1D10 SINE Alu -8 109 21 1 1268 3281 161 107 16 chr13 89569975 89570668 -30713644 + RMER6A LTR ERVK 1 756 0 1 1268 26 64 0 0 chr13 89574193 89574240 -30710072 + AT_rich Low_complexity Low_complexity 1 47 0 1 1268 227 286 126 50 chr13 89574672 89574871 -30709441 - L2a LINE L2 -3 3423 3210 1 1268 233 75 0 24 chr13 89574927 89574968 -30709344 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1268 357 348 50 42 chr13 89575291 89575531 -30708781 - MER102a DNA MER1_type -1 329 88 1 1268 505 335 97 63 chr13 89575664 89575903 -30708409 - MLT1A1 LTR MaLR -4 404 157 1 1268 2999 47 0 94 chr13 89575903 89576348 -30707964 - L1Md_F2 LINE L1 -12 6570 6168 1 1268 505 336 101 83 chr13 89576348 89576469 -30707843 - MLT1A1 LTR MaLR -252 156 4 1 1268 354 23 0 0 chr13 89577014 89577057 -30707255 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1268 282 329 0 0 chr13 89577317 89577390 -30706922 - ID4_ SINE ID -8 75 3 1 1268 204 156 22 22 chr13 89577557 89577603 -30706709 + CT-rich Low_complexity Low_complexity 1 46 0 1 1268 252 244 35 30 chr13 89577706 89577875 -30706437 + (CTCA)n Simple_repeat Simple_repeat 2 171 0 1 1268 23 33 0 0 chr13 89578087 89578117 -30706195 + AT_rich Low_complexity Low_complexity 1 30 0 1 1268 252 0 0 0 chr13 89579439 89579467 -30704845 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1 1268 10453 22 0 0 chr13 89579610 89580849 -30703463 - L1_Mm LINE L1 -1501 4382 3144 1 1268 1321 32 0 0 chr13 89580843 89580997 -30703315 + L1Md_T LINE L1 5433 5586 -297 1 1268 8477 32 0 0 chr13 89580997 89581993 -30702319 + L1Md_T LINE L1 5587 6582 0 1 1268 1761 171 3 95 chr13 89582727 89583095 -30701217 - Lx4A LINE L1 -2 7056 6723 1 1268 284 0 28 0 chr13 89583594 89583630 -30700682 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 1 1268 289 221 146 10 chr13 89583637 89583733 -30700579 + PB1D9 SINE Alu 7 115 -5 1 1268 237 213 35 17 chr13 89584205 89584377 -30699935 + (CA)n Simple_repeat Simple_repeat 1 175 0 1 1268 323 153 41 0 chr13 89584404 89584502 -30699810 + (CA)n Simple_repeat Simple_repeat 1 102 0 1 1268 390 156 0 15 chr13 89584861 89584926 -30699386 + RMER10A LTR ERVL 1 64 -378 1 1268 720 298 60 27 chr13 89584938 89585269 -30699043 - RLTR15 LTR ERVK -17 342 1 1 1268 1584 188 62 30 chr13 89585269 89585640 -30698672 + RMER10A LTR ERVL 60 442 0 1 1268 423 0 0 0 chr13 89585785 89585832 -30698480 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1268 3928 127 0 23 chr13 89585905 89586608 -30697704 - L1_Mm LINE L1 -128 5758 5126 1 1268 3773 103 28 2 chr13 89586608 89587307 -30697005 + L1_Mus3 LINE L1 6054 6638 0 1 1268 435 38 0 0 chr13 89587341 89587394 -30696918 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 1 1268 1023 53 8 0 chr13 89587394 89587525 -30696787 - B1_Mm SINE Alu -11 136 5 1 1268 420 291 137 5 chr13 89587570 89587767 -30696545 + ID_B1 SINE B4 2 224 0 1 1268 8830 10 0 0 chr13 89588136 89589625 -30694687 - L1Md_A LINE L1 -1 6581 5093 1 1268 10267 10 0 0 chr13 89589623 89590789 -30693523 + L1_Mm LINE L1 4060 5225 -658 1 1268 3454 152 20 15 chr13 89591767 89592099 -30692213 - Lx2 LINE L1 -10 6987 6650 1 1268 3389 35 0 0 chr13 89592099 89592495 -30691817 - MTA_Mm LTR MaLR 0 396 1 1 1268 3454 152 20 15 chr13 89592495 89592762 -30691550 - Lx2 LINE L1 -348 6649 6385 1 1268 3513 70 4 4 chr13 89592761 89593220 -30691092 - L1_Mus2 LINE L1 -1 6565 6107 1 1268 1424 94 10 0 chr13 89593221 89593423 -30690889 - Lx2 LINE L1 -596 6401 6198 1 1268 21 0 0 0 chr13 89594062 89594083 -30690229 + AT_rich Low_complexity Low_complexity 1 21 0 1 1268 414 0 0 0 chr13 89594302 89594348 -30689964 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1268 344 319 7 82 chr13 89594348 89594495 -30689817 - B1F SINE Alu -11 138 3 1 1268 2849 139 162 34 chr13 89594852 89595462 -30688850 - RMER6C LTR ERVK -2 688 1 1 1268 492 18 0 0 chr13 89595512 89595569 -30688743 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1268 463 341 52 42 chr13 89595686 89595985 -30688327 + MLT2B4 LTR ERVL 32 330 -226 1 1268 197 33 33 0 chr13 89596363 89596393 -30687919 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 1 1268 318 257 154 9 chr13 89596618 89596728 -30687584 + LTR40a LTR ERVL 56 181 -338 1 1268 366 338 98 9 chr13 89596804 89597019 -30687293 - L2 LINE L2 -547 2872 2639 1 1268 22 0 0 0 chr13 89597024 89597046 -30687266 + AT_rich Low_complexity Low_complexity 1 22 0 1 1268 28 0 0 0 chr13 89597170 89597198 -30687114 + AT_rich Low_complexity Low_complexity 1 28 0 1 1268 201 121 0 0 chr13 89597302 89597335 -30686977 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 1 1268 2219 53 0 24 chr13 89597463 89597751 -30686561 + L1_Mus2 LINE L1 6286 6566 0 1 1268 603 240 24 0 chr13 89598324 89598449 -30685863 + B3 SINE B2 1 128 -88 1 1268 2380 131 15 12 chr13 89598689 89598808 -30685504 - Lx LINE L1 -1 6653 6529 1 1268 3444 30 0 0 chr13 89598808 89599204 -30685108 + MTA_Mm LTR MaLR 1 396 0 1 1268 2380 131 15 12 chr13 89599204 89599487 -30684825 - Lx LINE L1 -126 6528 6251 1 1268 1999 154 23 8 chr13 89599487 89599844 -30684468 + Lx7 LINE L1 5388 5742 -1954 1 1268 1499 366 60 30 chr13 89600697 89601483 -30682829 + MTEa-int LTR MaLR 770 1578 -2 1 1268 555 257 62 102 chr13 89601484 89601709 -30682603 + MTEa LTR MaLR 1 216 -163 1 1268 390 21 0 0 chr13 89601921 89601968 -30682344 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1268 1074 52 7 0 chr13 89604152 89604288 -30680024 + B1_Mm SINE Alu 1 137 -10 1 1268 216 86 0 0 chr13 89604288 89604323 -30679989 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1268 250 337 41 36 chr13 89604448 89604642 -30679670 - L1M2 LINE L1 -485 5806 5612 1 1268 247 323 30 10 chr13 89605151 89605251 -30679061 - MER20 DNA MER1_type -4 215 114 1 1268 1221 255 202 41 chr13 89605271 89605781 -30678531 - Lx7 LINE L1 -2 7694 7103 1 1268 1034 190 73 0 chr13 89606436 89606641 -30677671 + Lx9 LINE L1 6785 7004 -640 1 1268 237 132 0 0 chr13 89606794 89606832 -30677480 + (A)n Simple_repeat Simple_repeat 1 38 0 1 1268 1222 92 11 0 chr13 89607232 89607406 -30676906 + L1_Mus1 LINE L1 6392 6567 0 1 1268 682 198 6 6 chr13 89608868 89609041 -30675271 + (TA)n Simple_repeat Simple_repeat 2 174 0 1 1268 225 254 0 31 chr13 89609736 89609801 -30674511 + L1MEc LINE L1 34 96 -6304 1 1268 303 341 36 12 chr13 89610162 89610328 -30673984 + L1MEc LINE L1 537 706 -5694 1 1268 331 286 19 58 chr13 89610727 89610831 -30673481 + MTEb LTR MaLR 231 330 -49 1 1268 3986 48 2 4 chr13 89611043 89611540 -30672772 - L1Md_F2 LINE L1 0 6582 6087 1 1268 6203 37 2 0 chr13 89611540 89612467 -30671845 + L1Md_F2 LINE L1 5130 6057 -525 1 1268 360 337 73 38 chr13 89612618 89612905 -30671407 + L1MEc LINE L1 4976 5272 -1047 1 1268 216 288 18 26 chr13 89613045 89613159 -30671153 + A-rich Low_complexity Low_complexity 3 115 0 1 1268 261 286 0 0 chr13 89613531 89613615 -30670697 + L1ME1 LINE L1 5670 5753 -409 1 1268 369 324 80 33 chr13 89613612 89613912 -30670400 + L1ME1 LINE L1 5855 6168 -11 1 1268 905 67 8 0 chr13 89614497 89614616 -30669696 + MTB_Mm LTR MaLR 281 400 0 1 1268 7359 84 16 71 chr13 89614616 89615776 -30668536 + MTB_Mm-int LTR MaLR 1 1096 -2 1 1268 2914 56 0 5 chr13 89615781 89616159 -30668153 + MTB_Mm LTR MaLR 32 407 0 1 1268 220 298 154 26 chr13 89616687 89616804 -30667508 - MIRb SINE MIR -133 135 4 1 1268 2525 306 48 33 chr13 89616823 89617372 -30666940 + Lx7 LINE L1 6352 6917 -779 1 1268 3488 31 46 0 chr13 89617372 89617789 -30666523 + RLTR10C LTR ERVK 1 436 0 1 1268 2525 306 48 33 chr13 89617789 89618181 -30666131 + Lx7 LINE L1 6918 7307 -389 1 1268 195 69 0 0 chr13 89618205 89618234 -30666078 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1268 1277 78 22 6 chr13 89618310 89618491 -30665821 - L1_Mus2 LINE L1 0 6566 6383 1 1268 234 40 58 39 chr13 89619476 89619528 -30664784 + (CAAAAA)n Simple_repeat Simple_repeat 6 58 0 1 1268 546 16 0 0 chr13 89620354 89620417 -30663895 + (TC)n Simple_repeat Simple_repeat 1 63 0 1 1268 271 385 7 37 chr13 89620483 89620618 -30663694 + LTR16C LTR ERVL 357 487 -2 1 1268 262 401 116 37 chr13 89621568 89621809 -30662503 + MER70B LTR ERVL 7 266 -312 1 1268 225 421 5 53 chr13 89622308 89622496 -30661816 + MIR SINE MIR 71 249 -13 1 1268 204 229 47 24 chr13 89623222 89623307 -30661005 + A-rich Low_complexity Low_complexity 4 90 0 1 1268 358 264 27 0 chr13 89623306 89623416 -30660896 + GA-rich Low_complexity Low_complexity 3 115 0 1 1268 6643 92 20 2 chr13 89623419 89624596 -30659716 - L1VL4 LINE L1 -2352 1207 13 1 1268 391 279 125 0 chr13 89624600 89624704 -30659608 - ID_B1 SINE B4 -1 223 107 1 1268 21 36 0 0 chr13 89624777 89624805 -30659507 + AT_rich Low_complexity Low_complexity 1 28 0 1 1268 27 49 0 0 chr13 89625386 89625427 -30658885 + AT_rich Low_complexity Low_complexity 1 41 0 1 1268 1300 92 11 11 chr13 89626193 89626380 -30657932 + B2_Mm2 SINE B2 1 187 -8 1 1268 309 250 56 37 chr13 89626786 89626894 -30657418 + RMER15 LTR ERVL 452 561 -14 1 1268 414 180 0 0 chr13 89627267 89627367 -30656945 + (TA)n Simple_repeat Simple_repeat 1 100 0 1 1268 261 237 73 31 chr13 89627595 89627691 -30656621 - RMER30 DNA MER1_type -34 168 69 1 1268 413 315 109 38 chr13 89628427 89628694 -30655618 - HAL1 LINE L1 -1047 1460 1175 2 1268 1133 136 12 93 chr13 89628800 89629059 -30655253 - Lx3B LINE L1 -2 6971 6734 2 1268 5132 133 19 4 chr13 89629059 89630058 -30654254 - Lx3B LINE L1 -576 6397 5386 2 1268 1640 137 11 0 chr13 89630057 89630335 -30653977 + Lx3B LINE L1 5116 5396 -490 2 1268 1092 77 14 0 chr13 89631240 89631383 -30652929 - B1_Mus1 SINE Alu -3 145 1 2 1268 218 32 0 31 chr13 89631520 89631552 -30652760 + (TTTTG)n Simple_repeat Simple_repeat 4 34 0 2 1268 657 149 0 0 chr13 89631885 89631999 -30652313 + (TA)n Simple_repeat Simple_repeat 2 115 0 2 1268 307 112 62 0 chr13 89632055 89632135 -30652177 + (TAGA)n Simple_repeat Simple_repeat 2 86 0 2 1268 398 192 43 49 chr13 89632138 89632302 -30652010 + Lx9 LINE L1 7475 7637 -7 2 1268 234 319 0 65 chr13 89633585 89633662 -30650650 - MLT1K LTR MaLR -183 412 341 2 1268 75 22 0 0 chr13 89634741 89634830 -30649482 + AT_rich Low_complexity Low_complexity 1 89 0 2 1268 683 207 78 6 chr13 89635364 89635544 -30648768 + Lx9 LINE L1 7343 7535 -109 2 1268 568 117 9 19 chr13 89637346 89637451 -30646861 + (GAAA)n Simple_repeat Simple_repeat 1 104 0 2 1268 348 344 85 34 chr13 89637851 89638086 -30646226 - L1M5 LINE L1 -536 5588 5342 2 1268 28 79 0 0 chr13 89638776 89638839 -30645473 + AT_rich Low_complexity Low_complexity 1 63 0 2 1268 324 0 0 0 chr13 89639966 89640002 -30644310 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1268 357 370 72 23 chr13 89640002 89640430 -30643882 + MER34 LTR ERV1 36 537 -5 2 1268 603 27 0 0 chr13 89640452 89640525 -30643787 + (CA)n Simple_repeat Simple_repeat 2 74 0 2 1268 8071 76 7 2 chr13 89640684 89641873 -30642439 + L1_Mus3 LINE L1 5432 6633 -5 2 1268 207 0 0 0 chr13 89642547 89642570 -30641742 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1268 228 264 95 52 chr13 89642585 89642701 -30641611 - MTEa LTR MaLR -8 371 251 2 1268 198 103 0 0 chr13 89642952 89642981 -30641331 + (CTA)n Simple_repeat Simple_repeat 1 29 0 2 1268 344 297 36 28 chr13 89642988 89643161 -30641151 + Lx9 LINE L1 6826 7050 -594 2 1268 1494 268 118 62 chr13 89644762 89645658 -30638654 + L1MA8 LINE L1 5142 6157 -134 2 1268 2342 276 138 30 chr13 89646481 89646592 -30637720 - RMER1C Other Other -4 1338 1223 2 1268 200 86 29 0 chr13 89646592 89646627 -30637685 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2 1268 2342 278 134 30 chr13 89646627 89647398 -30636914 - RMER1C Other Other -120 1222 393 2 1268 634 301 68 0 chr13 89647414 89647590 -30636722 - B3A SINE B2 -10 188 1 2 1268 900 308 98 6 chr13 89647663 89647989 -30636323 + MTD LTR MaLR 32 387 -32 2 1268 421 217 0 65 chr13 89647989 89648112 -30636200 + ORR1C1 LTR MaLR 1 115 -252 2 1268 2844 205 62 21 chr13 89648142 89648419 -30635893 + RMER6D LTR ERVK 76 368 -352 2 1268 423 0 0 0 chr13 89648419 89648466 -30635846 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1268 2844 205 62 21 chr13 89648466 89648802 -30635510 + RMER6D LTR ERVK 369 714 -6 2 1268 1166 202 40 20 chr13 89648806 89649059 -30635253 + ORR1C1 LTR MaLR 121 378 0 2 1268 1640 164 14 66 chr13 89649497 89649844 -30634468 + ORR1A4 LTR MaLR 1 329 0 2 1268 4935 233 68 43 chr13 89649844 89650749 -30633563 + Lx5 LINE L1 5537 6454 -596 2 1268 477 0 0 0 chr13 89650749 89650802 -30633510 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1268 4935 261 56 62 chr13 89650802 89651409 -30632903 + Lx5 LINE L1 6455 7047 -3 2 1268 1054 107 12 0 chr13 89651434 89651602 -30632710 + (GAA)n Simple_repeat Simple_repeat 1 170 0 2 1268 507 399 36 30 chr13 89651666 89651997 -30632315 + MLT1A1 LTR MaLR 74 406 -2 2 1268 268 239 43 43 chr13 89652574 89652666 -30631646 + ORR1D2 LTR MaLR 279 370 0 2 1268 248 286 16 0 chr13 89652681 89652744 -30631568 - MLT1B LTR MaLR -4 370 307 2 1268 264 297 150 33 chr13 89652872 89653025 -30631287 - MLT1B LTR MaLR -214 176 6 2 1269 345 24 0 0 chr13 89655290 89655332 -30628980 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1269 6610 171 89 4 chr13 89656329 89658263 -30626049 + Lx4B LINE L1 4923 7050 -8 2 1269 21 0 0 0 chr13 89659813 89659834 -30624478 + AT_rich Low_complexity Low_complexity 1 21 0 2 1269 22 0 0 0 chr13 89660070 89660092 -30624220 + AT_rich Low_complexity Low_complexity 1 22 0 2 1269 224 373 86 6 chr13 89660781 89660943 -30623369 - MIR SINE MIR -63 199 25 2 1269 1208 306 71 44 chr13 89660946 89661697 -30622615 + L1M4 LINE L1 27 797 -5745 2 1269 725 292 37 4 chr13 89661735 89661979 -30622333 - Lx8 LINE L1 -592 6881 6630 2 1269 750 10 30 0 chr13 89662279 89662378 -30621934 + (GA)n Simple_repeat Simple_repeat 2 103 0 2 1269 377 300 146 19 chr13 89662501 89662769 -30621543 + L1M4 LINE L1 907 1208 -5334 2 1269 3200 56 0 5 chr13 89662835 89663233 -30621079 - MTA_Mm LTR MaLR 0 396 1 2 1269 544 306 57 42 chr13 89663573 89663758 -30620554 + B3 SINE B2 1 191 -25 2 1269 2767 164 166 22 chr13 89663758 89664042 -30620270 - RMER6C LTR ERVK 0 690 374 2 1269 612 40 0 0 chr13 89664042 89664117 -30620195 + (TCC)n Simple_repeat Simple_repeat 3 77 0 2 1269 2767 164 166 22 chr13 89664117 89664435 -30619877 - RMER6C LTR ERVK -317 373 1 2 1269 544 306 57 42 chr13 89664435 89664461 -30619851 + B3 SINE B2 192 215 -1 2 1269 308 328 74 37 chr13 89664462 89664652 -30619660 + L1M4 LINE L1 1899 2095 -4551 2 1269 208 326 11 11 chr13 89664905 89665082 -30619230 + (TAAA)n Simple_repeat Simple_repeat 2 178 0 2 1269 381 308 100 35 chr13 89665178 89665746 -30618566 + L1M4 LINE L1 2804 3408 -3236 2 1269 3067 67 5 9 chr13 89665759 89666179 -30618133 - L1Md_F2 LINE L1 -1 6581 6164 2 1269 1224 58 82 0 chr13 89666192 89666363 -30617949 - B2_Mm1t SINE B2 -8 185 1 2 1269 663 13 0 0 chr13 89668625 89668701 -30615611 + (CA)n Simple_repeat Simple_repeat 2 77 0 2 1269 28 79 0 0 chr13 89669814 89669877 -30614435 + AT_rich Low_complexity Low_complexity 1 63 0 2 1269 387 0 0 0 chr13 89670444 89670487 -30613825 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1269 240 314 120 69 chr13 89670682 89670956 -30613356 - B4A SINE B4 -2 290 3 2 1269 207 100 0 0 chr13 89671707 89671737 -30612575 + (GGGGA)n Simple_repeat Simple_repeat 5 34 0 2 1269 1504 92 9 4 chr13 89672024 89672253 -30612059 + L1_Mus3 LINE L1 6407 6636 -2 2 1269 388 302 73 80 chr13 89673018 89673126 -30611186 + RSINE1 SINE B4 10 124 -41 2 1269 414 0 0 0 chr13 89673126 89673172 -30611140 + (TG)n Simple_repeat Simple_repeat 1 46 0 2 1269 524 124 0 0 chr13 89673173 89673295 -30611017 - L1_Mus3 LINE L1 0 6638 6539 2 1269 388 302 73 80 chr13 89673295 89673334 -30610978 + RSINE1 SINE B4 125 158 -7 2 1269 191 292 45 15 chr13 89673770 89673836 -30610476 + MIR3 SINE MIR 87 154 -54 2 1269 249 235 15 8 chr13 89674469 89674602 -30609710 + (TA)n Simple_repeat Simple_repeat 2 135 0 2 1269 21 71 0 0 chr13 89675374 89675416 -30608896 + AT_rich Low_complexity Low_complexity 1 42 0 2 1269 26 30 0 0 chr13 89677015 89677048 -30607264 + AT_rich Low_complexity Low_complexity 1 33 0 2 1269 249 159 0 0 chr13 89677301 89677345 -30606967 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1269 1126 95 0 0 chr13 89677444 89677592 -30606720 + B1_Mus1 SINE Alu 1 148 0 2 1269 215 220 0 0 chr13 89677593 89677652 -30606660 + (CAAA)n Simple_repeat Simple_repeat 3 61 0 2 1269 261 0 0 0 chr13 89677977 89678006 -30606306 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1269 450 0 0 0 chr13 89678017 89678067 -30606245 + (GGA)n Simple_repeat Simple_repeat 3 52 0 2 1269 468 0 0 0 chr13 89678064 89678116 -30606196 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1269 21 57 0 0 chr13 89678625 89678660 -30605652 + AT_rich Low_complexity Low_complexity 1 35 0 2 1269 225 94 0 0 chr13 89679353 89679385 -30604927 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1269 504 0 0 0 chr13 89679577 89679633 -30604679 + (TG)n Simple_repeat Simple_repeat 2 57 0 2 1269 229 204 0 0 chr13 89680362 89680411 -30603901 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1269 22 0 0 0 chr13 89681091 89681113 -30603199 + AT_rich Low_complexity Low_complexity 1 22 0 2 1269 22 56 0 0 chr13 89681837 89681873 -30602439 + AT_rich Low_complexity Low_complexity 1 36 0 2 1269 2034 40 0 0 chr13 89683430 89683678 -30600634 + L1Md_F3 LINE L1 6323 6570 -14 2 1269 7135 100 12 27 chr13 89683740 89684941 -30599371 - L1_Mus4 LINE L1 -6 6630 5447 2 1269 209 98 48 24 chr13 89685909 89685951 -30598361 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 2 1269 186 43 0 0 chr13 89685958 89685981 -30598331 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1269 252 59 0 0 chr13 89686023 89686057 -30598255 + (CTTG)n Simple_repeat Simple_repeat 2 35 0 2 1269 231 358 0 29 chr13 89686060 89686129 -30598183 - ID4_ SINE ID 0 83 17 2 1269 185 222 67 0 chr13 89686398 89686443 -30597869 - L2b LINE L2 -5 3370 3323 2 1269 406 208 98 10 chr13 89687935 89688037 -30596275 - B3 SINE B2 -11 205 95 2 1269 226 281 0 89 chr13 89688431 89688521 -30595791 + ID2 SINE ID 1 82 -1 2 1269 259 350 0 0 chr13 89688606 89688746 -30595566 + GA-rich Low_complexity Low_complexity 3 142 0 2 1269 211 319 14 0 chr13 89689152 89689221 -30595091 - ID4_ SINE ID -1 82 13 2 1269 823 196 2 230 chr13 89689295 89689562 -30594750 + RMER17C LTR ERVK 1 234 -176 2 1269 243 0 0 0 chr13 89689562 89689589 -30594723 + (CA)n Simple_repeat Simple_repeat 1 27 0 2 1269 823 196 2 230 chr13 89689589 89689778 -30594534 + RMER17C LTR ERVK 235 353 -57 2 1269 465 283 166 5 chr13 89689908 89690107 -30594205 + Tigger14a DNA MER2_type 49 279 -45 2 1269 1200 113 0 0 chr13 89690431 89690785 -30593527 + (TG)n Simple_repeat Simple_repeat 1 354 0 2 1269 501 248 0 9 chr13 89690902 89691016 -30593296 + PB1D10 SINE Alu 4 116 -1 2 1269 515 128 0 9 chr13 89692122 89692232 -30592080 + (CA)n Simple_repeat Simple_repeat 1 109 0 2 1269 230 332 88 36 chr13 89693160 89693354 -30590958 + L2 LINE L2 2366 2569 -850 2 1269 254 314 104 32 chr13 89693849 89694129 -30590183 + L1MEg LINE L1 794 1093 -4991 2 1269 241 295 196 0 chr13 89694711 89694823 -30589489 - RSINE1 SINE B4 -21 144 11 2 1269 368 40 20 0 chr13 89695306 89695356 -30588956 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1269 761 288 24 57 chr13 89695375 89695622 -30588690 - B4A SINE B4 -52 240 2 2 1269 317 302 90 30 chr13 89695642 89695843 -30588469 - L1MEc LINE L1 -3208 3111 2899 2 1269 337 300 91 7 chr13 89696065 89696355 -30587957 - L1MEc LINE L1 -3730 2589 2276 2 1269 312 301 121 35 chr13 89696556 89696904 -30587408 - L1MEc LINE L1 -4384 2016 1639 2 1269 318 139 0 0 chr13 89696914 89696986 -30587326 + (A)n Simple_repeat Simple_repeat 1 72 0 2 1269 257 301 126 41 chr13 89696991 89697501 -30586811 - L1MEc LINE L1 -4831 1569 1017 2 1269 234 0 0 0 chr13 89697739 89697765 -30586547 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1269 304 359 77 66 chr13 89697993 89698235 -30586077 - L1MEc LINE L1 -5993 407 151 2 1269 848 82 0 8 chr13 89698235 89698358 -30585954 + (TTTC)n Simple_repeat Simple_repeat 2 123 0 3 1269 304 359 77 66 chr13 89698358 89698479 -30585833 - L1MEc LINE L1 -6250 150 41 2 1269 1372 75 43 0 chr13 89699531 89699718 -30584594 - B2_Mm2 SINE B2 0 195 1 3 1269 429 20 0 0 chr13 89699967 89700017 -30584295 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1269 595 259 65 65 chr13 89700169 89700354 -30583958 + B3 SINE B2 1 179 -37 3 1269 377 51 34 0 chr13 89700354 89700413 -30583899 + (CAGAGA)n Simple_repeat Simple_repeat 6 66 0 3 1269 595 259 65 65 chr13 89700413 89700442 -30583870 + B3 SINE B2 180 215 -1 3 1269 29 98 0 0 chr13 89700588 89700680 -30583632 + AT_rich Low_complexity Low_complexity 1 92 0 3 1269 331 335 57 25 chr13 89700770 89700929 -30583383 + RSINE1 SINE B4 2 165 0 3 1269 381 216 22 29 chr13 89700929 89701201 -30583111 + (CA)n Simple_repeat Simple_repeat 1 270 0 3 1269 831 146 28 28 chr13 89701274 89701415 -30582897 + B1_Mus2 SINE Alu 1 141 -6 3 1269 534 140 0 0 chr13 89701433 89701547 -30582765 + (TAG)n Simple_repeat Simple_repeat 3 116 0 3 1269 617 194 0 6 chr13 89702174 89702355 -30581957 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1269 236 137 20 0 chr13 89702379 89702430 -30581882 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1269 230 219 10 68 chr13 89705422 89705525 -30578787 + (GGATG)n Simple_repeat Simple_repeat 4 100 0 3 1269 892 290 73 23 chr13 89706141 89706536 -30577776 - MTD LTR MaLR 0 419 5 3 1269 544 60 9 48 chr13 89707369 89707474 -30576838 + Lx LINE L1 6548 6648 -6 3 1269 783 75 0 0 chr13 89707481 89707588 -30576724 + (GAGAA)n Simple_repeat Simple_repeat 4 110 0 3 1269 315 274 21 10 chr13 89707622 89707718 -30576594 + B4A SINE B4 1 97 -195 3 1269 442 335 6 19 chr13 89707776 89707937 -30576375 + B4A SINE B4 114 272 -20 3 1269 1059 108 0 0 chr13 89708658 89708806 -30575506 - B1_Mus1 SINE Alu 0 148 1 3 1269 1214 126 11 5 chr13 89709222 89709413 -30574899 - B2_Mm2 SINE B2 -3 192 1 3 1269 613 305 13 19 chr13 89709489 89709646 -30574666 + RMER13A LTR ERVK 696 851 -9 3 1269 40 67 0 0 chr13 89709680 89709755 -30574557 + AT_rich Low_complexity Low_complexity 1 75 0 3 1269 191 145 43 14 chr13 89709770 89709840 -30574472 + (TA)n Simple_repeat Simple_repeat 2 73 0 3 1269 1971 195 186 56 chr13 89709949 89710832 -30573480 - Lx9 LINE L1 -1553 6091 5047 3 1269 1263 115 0 10 chr13 89711775 89711969 -30572343 + B2_Mm2 SINE B2 2 193 -2 3 1269 226 274 0 0 chr13 89712919 89712970 -30571342 + GA-rich Low_complexity Low_complexity 3 53 0 3 1269 594 0 0 0 chr13 89712982 89713048 -30571264 + (GGGAA)n Simple_repeat Simple_repeat 5 70 0 3 1269 204 67 0 0 chr13 89713099 89713129 -30571183 + (TAG)n Simple_repeat Simple_repeat 2 31 0 3 1269 2526 47 65 0 chr13 89713296 89713617 -30570695 + ORR1A0 LTR MaLR 1 342 -4 3 1269 1044 277 93 5 chr13 89714145 89714552 -30569760 + Lx9 LINE L1 7195 7637 -7 3 1269 810 86 0 25 chr13 89714564 89714683 -30569629 + Lx3_Mus LINE L1 6775 6890 -119 3 1269 198 0 0 0 chr13 89714708 89714730 -30569582 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 3 1269 722 203 0 59 chr13 89715223 89715366 -30568946 + B1_Mus1 SINE Alu 6 142 -6 3 1269 486 0 0 0 chr13 89715366 89715420 -30568892 + (AATAG)n Simple_repeat Simple_repeat 4 57 0 3 1269 2892 35 3 0 chr13 89715513 89715855 -30568457 - L1Md_F2 LINE L1 -235 6347 6005 3 1269 301 204 86 26 chr13 89715862 89715978 -30568334 + Charlie2b DNA MER1_type 2592 2714 -68 3 1269 28 0 0 0 chr13 89715978 89716006 -30568306 + AT_rich Low_complexity Low_complexity 1 28 0 3 1269 218 252 50 89 chr13 89716054 89716206 -30568106 + MER5B DNA MER1_type 30 188 -1 3 1269 3241 26 5 0 chr13 89718056 89718442 -30565870 - L1Md_F2 LINE L1 -549 6033 5646 3 1269 1774 116 0 47 chr13 89718442 89718740 -30565572 + L1Md_F2 LINE L1 6297 6580 -2 3 1269 578 241 9 0 chr13 89718858 89718974 -30565338 - RSINE1 SINE B4 -37 128 12 3 1269 6278 74 0 1 chr13 89719176 89719991 -30564321 - L1_Mus1 LINE L1 0 6567 5754 3 1269 305 32 31 6 chr13 89719991 89720043 -30564269 + L1_Mm LINE L1 5353 5408 -472 3 1269 248 213 0 0 chr13 89720068 89720115 -30564197 - Lx8 LINE L1 -215 7258 7212 3 1269 819 267 123 7 chr13 89720156 89720473 -30563839 - Lx8 LINE L1 -1662 5982 5633 3 1269 995 280 19 7 chr13 89720468 89720777 -30563535 + Lx8 LINE L1 5344 5656 -224 3 1269 668 289 29 14 chr13 89720878 89721085 -30563227 + B4A SINE B4 6 215 -77 3 1269 304 257 0 13 chr13 89721107 89721182 -30563130 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1269 1026 102 102 6 chr13 89721195 89721362 -30562950 - B2_Mm2 SINE B2 -5 190 8 3 1269 1176 54 0 0 chr13 89721511 89721658 -30562654 + B1_Mm SINE Alu 1 147 0 3 1269 280 77 39 0 chr13 89722249 89722301 -30562011 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 3 1269 183 42 0 0 chr13 89726749 89726773 -30557539 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1269 271 262 24 12 chr13 89726807 89726892 -30557420 + GA-rich Low_complexity Low_complexity 3 88 0 3 1269 794 264 27 59 chr13 89726908 89727129 -30557183 + B4A SINE B4 11 224 -68 3 1269 2690 86 0 10 chr13 89727168 89727555 -30556757 + L1Md_F2 LINE L1 6200 6582 0 3 1269 486 294 11 11 chr13 89727601 89727780 -30556532 + (CATA)n Simple_repeat Simple_repeat 1 179 0 3 1269 372 318 6 28 chr13 89727794 89727975 -30556337 + (CATA)n Simple_repeat Simple_repeat 2 178 0 3 1269 1222 223 135 24 chr13 89729999 89730376 -30553936 + MTD LTR MaLR 1 419 0 3 1269 23 0 0 0 chr13 89731011 89731034 -30553278 + AT_rich Low_complexity Low_complexity 1 23 0 3 1269 509 303 93 76 chr13 89731243 89731683 -30552629 - RLTR18B LTR ERVK -186 430 13 3 1269 637 300 132 103 chr13 89732125 89732541 -30551771 - Lx8 LINE L1 -5 7468 7041 3 1269 3353 188 128 43 chr13 89733112 89734018 -30550294 - RLTR13C1 LTR ERVK 0 983 1 3 1269 26 30 0 0 chr13 89734126 89734159 -30550153 + AT_rich Low_complexity Low_complexity 1 33 0 3 1269 483 63 0 0 chr13 89734763 89734826 -30549486 + (T)n Simple_repeat Simple_repeat 1 63 0 3 1269 275 271 40 50 chr13 89734952 89735053 -30549259 - MIRb SINE MIR -79 189 90 3 1269 243 0 0 0 chr13 89736272 89736299 -30548013 + (CA)n Simple_repeat Simple_repeat 2 28 0 3 1269 360 43 0 0 chr13 89736522 89736568 -30547744 + (TA)n Simple_repeat Simple_repeat 2 47 0 3 1269 231 194 32 0 chr13 89736621 89736683 -30547629 + A-rich Low_complexity Low_complexity 1 64 0 3 1269 186 43 0 0 chr13 89737428 89737451 -30546861 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1269 2257 156 18 36 chr13 89738875 89739268 -30545044 - ORR1B1 LTR MaLR 0 394 9 3 1269 343 289 32 51 chr13 89739826 89739845 -30544467 - CYRA11_Mm Unknown Y-chromosome -295 322 171 3 1269 777 163 0 7 chr13 89739845 89739981 -30544331 + URR1B DNA MER1_type 91 225 0 3 1269 207 273 0 18 chr13 89740386 89740442 -30543870 + GA-rich Low_complexity Low_complexity 4 58 0 3 1269 25 75 0 0 chr13 89742472 89742525 -30541787 + AT_rich Low_complexity Low_complexity 1 53 0 3 1269 209 136 45 15 chr13 89745194 89745261 -30539051 + A-rich Low_complexity Low_complexity 4 72 0 3 1269 369 235 0 36 chr13 89745631 89745715 -30538597 - MER45A DNA Tip100 -2 176 96 3 1269 408 267 22 0 chr13 89745726 89745816 -30538496 + PB1D10 SINE Alu 24 115 -2 3 1269 666 306 11 0 chr13 89746273 89746459 -30537853 + B4 SINE B4 2 189 -103 3 1269 311 44 22 0 chr13 89746573 89746618 -30537694 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1269 25 51 0 0 chr13 89748681 89748720 -30535592 + AT_rich Low_complexity Low_complexity 1 39 0 3 1269 212 59 0 29 chr13 89750695 89750730 -30533582 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1269 351 0 0 0 chr13 89751701 89751740 -30532572 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1269 342 0 0 0 chr13 89752565 89752603 -30531709 + (TA)n Simple_repeat Simple_repeat 2 39 0 3 1269 369 0 0 0 chr13 89752603 89752643 -30531669 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1269 215 318 15 0 chr13 89752644 89752710 -30531602 + ID4_ SINE ID 17 83 0 3 1269 255 93 0 0 chr13 89752882 89752925 -30531387 + (TTAG)n Simple_repeat Simple_repeat 2 44 0 3 1269 4523 96 16 35 chr13 89752927 89753438 -30530874 - Lx3A LINE L1 -13 6968 6478 3 1269 2574 111 116 36 chr13 89753438 89753851 -30530461 + RLTR41 LTR ERV1 1 446 0 3 1269 4523 96 16 35 chr13 89753851 89754023 -30530289 - Lx3A LINE L1 -504 6477 6298 3 1269 2111 121 3 6 chr13 89754024 89754365 -30529947 + Lx3_Mus LINE L1 5968 6307 -702 3 1269 1068 199 34 56 chr13 89754633 89754867 -30529445 + ORR1C2 LTR MaLR 2 230 -154 3 1269 346 347 40 25 chr13 89755178 89755376 -30528936 - RLTR16 LTR ERVK -274 231 31 3 1269 905 209 10 10 chr13 89755308 89755547 -30528765 + ORR1C2 LTR MaLR 98 384 0 3 1269 1504 286 31 22 chr13 89755968 89756419 -30527893 - Lx6 LINE L1 -61 7399 6945 3 1269 410 296 39 23 chr13 89756671 89756799 -30527513 - B1_Mus1 SINE Alu -8 140 11 3 1269 21 57 0 0 chr13 89756888 89756923 -30527389 + AT_rich Low_complexity Low_complexity 1 35 0 3 1269 233 109 0 115 chr13 89758265 89758312 -30526000 - RLTR31B_Mm LTR ERVK 0 557 516 3 1269 1016 124 5 31 chr13 89758312 89758503 -30525809 + Lx LINE L1 6462 6647 -7 3 1269 986 179 16 21 chr13 89759134 89759322 -30524990 + ORR1C1 LTR MaLR 1 187 -191 3 1269 372 200 0 0 chr13 89759333 89759453 -30524859 + CT-rich Low_complexity Low_complexity 1 120 0 3 1269 734 212 89 45 chr13 89759453 89759655 -30524657 + ORR1C1 LTR MaLR 174 384 0 3 1269 4327 173 98 5 chr13 89760620 89761437 -30522875 + RMER19B LTR ERVK 3 895 -7 3 1269 655 356 60 29 chr13 89761568 89761953 -30522359 - MLT1A1 LTR MaLR -4 404 8 3 1269 254 237 145 0 chr13 89761961 89762037 -30522275 - L1M3 LINE L1 -295 5888 5802 3 1269 235 309 118 8 chr13 89762197 89762324 -30521988 - L1M3 LINE L1 -594 5589 5449 3 1269 1385 39 2 11 chr13 89763373 89763916 -30520396 + (TG)n Simple_repeat Simple_repeat 1 537 0 3 1269 784 173 0 0 chr13 89764202 89764329 -30519983 + B3 SINE B2 3 129 -87 4 1269 31 26 0 0 chr13 89764346 89764384 -30519928 + AT_rich Low_complexity Low_complexity 1 38 0 4 1269 492 314 7 0 chr13 89764422 89764559 -30519753 + B1_Mur2 SINE Alu 2 139 -10 4 1269 1689 68 46 0 chr13 89766190 89766427 -30517885 - L1_Mus3 LINE L1 -6 6632 6385 4 1269 8067 54 0 0 chr13 89767511 89768507 -30515805 - L1Md_T LINE L1 0 6582 5587 4 1269 3377 10 0 0 chr13 89768518 89768901 -30515411 + L1Md_T LINE L1 5184 5566 -317 4 1269 339 141 281 0 chr13 89769659 89769723 -30514589 - RSINE1 SINE B4 -40 125 44 4 1269 229 130 38 132 chr13 89769680 89769733 -30514579 - B2_Mm2 SINE B2 -110 85 38 4 1269 1436 338 121 41 chr13 89770437 89771149 -30513163 - MLT-int LTR MaLR -721 1014 246 4 1269 1660 120 4 68 chr13 89771632 89771910 -30512402 + ORR1A4 LTR MaLR 1 260 -69 4 1269 735 93 0 8 chr13 89771897 89772016 -30512296 - ORR1A4-int LTR MaLR -1845 118 1 4 1269 1429 132 191 68 chr13 89772016 89772309 -30512003 - ORR1A4 LTR MaLR 0 329 1 4 1269 22 0 0 0 chr13 89772619 89772641 -30511671 + AT_rich Low_complexity Low_complexity 1 22 0 4 1269 521 138 11 0 chr13 89772966 89773060 -30511252 + (GAA)n Simple_repeat Simple_repeat 2 96 0 4 1269 22 56 0 0 chr13 89773144 89773180 -30511132 + AT_rich Low_complexity Low_complexity 1 36 0 4 1269 1846 68 4 4 chr13 89773181 89773433 -30510879 + L1_Mus2 LINE L1 6315 6566 0 4 1269 27 49 0 0 chr13 89774120 89774161 -30510151 + AT_rich Low_complexity Low_complexity 1 41 0 4 1269 199 328 44 74 chr13 89774481 89774616 -30509696 - MIRb SINE MIR -57 211 81 4 1269 1165 291 78 20 chr13 89774993 89775291 -30509021 - MTEb LTR MaLR 0 379 57 4 1269 3188 56 2 5 chr13 89775291 89775688 -30508624 + MTA_Mm LTR MaLR 1 396 0 4 1269 1165 291 78 20 chr13 89775688 89775747 -30508565 - MTEb LTR MaLR -323 56 1 4 1269 244 174 10 0 chr13 89776160 89776215 -30508097 + MTB_Mm LTR MaLR 14 70 -337 4 1269 1157 274 19 32 chr13 89776212 89776525 -30507787 - ORR1D2 LTR MaLR -38 332 24 4 1269 400 378 51 0 chr13 89776538 89776694 -30507618 + MT2A LTR ERVL 272 435 -98 4 1269 231 320 40 0 chr13 89776688 89776763 -30507549 + MT2A LTR ERVL 343 420 -113 4 1269 230 118 0 0 chr13 89776793 89776827 -30507485 + MLT2D LTR ERVL 525 558 -2 4 1269 230 380 0 83 chr13 89777283 89777392 -30506920 - MLT2B4 LTR ERVL -74 493 394 4 1269 370 273 16 32 chr13 89777425 89777550 -30506762 + GA-rich Low_complexity Low_complexity 3 125 0 4 1269 399 292 25 13 chr13 89777562 89777708 -30506604 - MLT2B4 LTR ERVL -209 205 55 4 1269 287 335 104 48 chr13 89777703 89778056 -30506256 + MLT1A0 LTR MaLR 6 406 -2 4 1269 243 253 173 41 chr13 89778196 89778342 -30505970 + MIR SINE MIR 72 237 -31 4 1269 872 299 13 18 chr13 89778370 89778598 -30505714 + ORR1E LTR MaLR 8 234 -125 4 1269 2174 136 0 6 chr13 89780620 89780946 -30503366 + ORR1A2 LTR MaLR 4 327 0 4 1269 9830 155 60 11 chr13 89780946 89782816 -30501496 + ORR1A2-int LTR MaLR 1 1963 0 4 1269 2159 132 25 0 chr13 89782816 89783135 -30501177 + ORR1A2 LTR MaLR 1 327 0 4 1269 189 94 0 0 chr13 89783782 89783814 -30500498 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 4 1269 406 343 75 23 chr13 89783814 89783987 -30500325 + B4A SINE B4 78 259 -33 4 1269 815 186 29 29 chr13 89783971 89784143 -30500169 + MTC LTR MaLR 39 210 -211 4 158 2041 134 10 0 chr13 89784145 89784444 -30499868 + L1VL4 LINE L1 195 496 -5806 4 1270 495 240 33 0 chr13 89786058 89786179 -30498133 + MER5A1 DNA MER1_type 7 131 -35 4 1270 364 344 30 8 chr13 89788392 89788524 -30495788 - L2a LINE L2 -4 3422 3288 4 1270 567 304 66 44 chr13 89789334 89789606 -30494706 - Lx8 LINE L1 0 7473 7196 4 1270 365 194 116 0 chr13 89789979 89790068 -30494244 + PB1D7 SINE Alu 12 113 -7 4 1270 287 312 94 32 chr13 89790429 89790737 -30493575 + Charlie2b DNA MER1_type 2213 2539 -243 4 1270 682 257 41 55 chr13 89790750 89790900 -30493412 + B3 SINE B2 2 151 -65 4 1270 495 0 0 0 chr13 89790900 89790955 -30493357 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1270 682 257 41 55 chr13 89790955 89791022 -30493290 + B3 SINE B2 152 216 0 4 1270 1991 152 0 65 chr13 89791084 89791436 -30492876 + ORR1A4 LTR MaLR 1 329 0 4 1270 948 222 38 111 chr13 89791478 89791767 -30492545 + B4A SINE B4 25 292 0 4 1270 2865 112 21 5 chr13 89791786 89792216 -30492096 + RLTR9B LTR ERVK 1 437 0 4 1270 256 264 113 13 chr13 89792217 89792367 -30491945 + Charlie2b DNA MER1_type 2602 2766 -16 4 1270 453 318 22 36 chr13 89792985 89793122 -30491190 + RSINE1 SINE B4 3 137 -28 4 1270 297 308 93 0 chr13 89793605 89793712 -30490600 - PB1D7 SINE Alu -3 117 1 4 1270 2204 105 0 9 chr13 89794467 89794795 -30489517 - L1_Mus4 LINE L1 0 6636 6312 4 1270 207 125 0 0 chr13 89797714 89797754 -30486558 + (A)n Simple_repeat Simple_repeat 1 40 0 4 1270 563 360 17 17 chr13 89797915 89798096 -30486216 - ID_B1 SINE B4 -6 218 38 4 1270 1006 313 71 24 chr13 89798636 89799631 -30484681 + L1ME3B LINE L1 4920 5969 -271 4 1270 189 0 0 0 chr13 89799943 89799964 -30484348 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 4 1270 225 344 83 53 chr13 89801009 89801178 -30483134 - MER102b DNA MER1_type -6 335 162 4 1270 224 219 0 12 chr13 89802885 89802968 -30481344 + GA-rich Low_complexity Low_complexity 2 83 0 4 1270 219 36 0 0 chr13 89803104 89803132 -30481180 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1270 21 36 0 0 chr13 89803402 89803430 -30480882 + AT_rich Low_complexity Low_complexity 1 28 0 4 1270 495 0 0 0 chr13 89804423 89804478 -30479834 + (TC)n Simple_repeat Simple_repeat 2 56 0 4 1270 333 0 0 0 chr13 89804478 89804514 -30479798 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1270 231 164 0 0 chr13 89806156 89806217 -30478095 + T-rich Low_complexity Low_complexity 6 66 0 4 1270 1185 61 0 0 chr13 89806273 89806420 -30477892 + B1_Mus2 SINE Alu 1 147 0 4 1270 474 294 84 13 chr13 89806733 89806888 -30477424 + B3 SINE B2 1 166 -50 4 1270 453 163 0 0 chr13 89808491 89808583 -30475729 + (CA)n Simple_repeat Simple_repeat 2 93 0 4 1270 485 193 136 26 chr13 89810081 89810235 -30474077 - L1MA5 LINE L1 -9 6291 6121 4 1270 974 154 0 0 chr13 89810634 89810783 -30473529 + B1_Mur4 SINE Alu 1 149 -1 4 1270 30 0 0 0 chr13 89810979 89811009 -30473303 + AT_rich Low_complexity Low_complexity 1 30 0 4 1270 225 0 0 0 chr13 89811324 89811349 -30472963 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 4 1270 1769 169 248 19 chr13 89811865 89812293 -30472019 + RLTR24 LTR ERV1 2 527 -2 4 1270 1596 247 68 2 chr13 89812403 89812813 -30471499 + Lx7 LINE L1 6917 7353 -343 4 1270 22 0 0 0 chr13 89812865 89812887 -30471425 + AT_rich Low_complexity Low_complexity 1 22 0 4 1270 1368 206 14 14 chr13 89812908 89813198 -30471114 + Lx7 LINE L1 7360 7649 -47 4 1270 492 356 64 45 chr13 89814891 89815265 -30469047 + Lx8 LINE L1 6997 7377 -96 4 1270 557 337 52 61 chr13 89815873 89816199 -30468113 + ORR1E LTR MaLR 1 323 -36 4 1270 243 238 35 59 chr13 89817014 89817099 -30467213 + B1F SINE Alu 66 148 -1 4 1270 923 311 106 31 chr13 89817981 89818303 -30466009 - MTD LTR MaLR -56 363 18 4 1270 21 0 0 0 chr13 89818804 89818825 -30465487 + AT_rich Low_complexity Low_complexity 1 21 0 4 1270 333 62 0 0 chr13 89821692 89821740 -30462572 + (CAAAAA)n Simple_repeat Simple_repeat 3 50 0 4 1270 189 333 20 82 chr13 89822490 89822588 -30461724 + MIRc SINE MIR 41 132 -136 4 1270 1134 88 0 0 chr13 89822906 89823053 -30461259 - B1_Mus1 SINE Alu 0 148 2 4 1270 250 206 31 31 chr13 89826801 89826866 -30457446 + CT-rich Low_complexity Low_complexity 5 69 0 4 1270 217 401 35 56 chr13 89827080 89827278 -30457034 + MIRb SINE MIR 18 211 -57 4 1270 216 0 0 0 chr13 89834535 89834559 -30449753 + (A)n Simple_repeat Simple_repeat 1 24 0 4 1270 21 0 0 0 chr13 89836537 89836558 -30447754 + AT_rich Low_complexity Low_complexity 1 21 0 4 1270 210 37 0 0 chr13 89836800 89836827 -30447485 + (TG)n Simple_repeat Simple_repeat 2 28 0 4 1270 979 209 9 43 chr13 89837953 89838163 -30446149 + B3 SINE B2 2 204 -12 4 1270 234 0 0 0 chr13 89838655 89838681 -30445631 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1270 231 199 37 0 chr13 89838821 89838883 -30445429 - B1F1 SINE Alu -45 72 9 4 1270 267 54 0 0 chr13 89841956 89841993 -30442319 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1270 22 35 0 0 chr13 89846855 89846884 -30437428 + AT_rich Low_complexity Low_complexity 1 29 0 4 1270 1049 68 30 0 chr13 89846886 89847019 -30437293 + B1_Mus1 SINE Alu 3 139 -9 4 1270 261 0 0 0 chr13 89847019 89847048 -30437264 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 4 1270 320 167 0 35 chr13 89847049 89847136 -30437176 + A-rich Low_complexity Low_complexity 1 84 0 4 1270 383 0 0 21 chr13 89847197 89847245 -30437067 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 4 1270 21 0 0 0 chr13 89847719 89847740 -30436572 + AT_rich Low_complexity Low_complexity 1 21 0 4 1270 899 60 0 50 chr13 89849176 89849316 -30434996 - L1_Mus2 LINE L1 -1 6565 6433 4 1270 25 51 0 0 chr13 89849985 89850024 -30434288 + AT_rich Low_complexity Low_complexity 1 39 0 4 1270 21 0 0 0 chr13 89851079 89851100 -30433212 + AT_rich Low_complexity Low_complexity 1 21 0 4 1270 219 69 0 0 chr13 89851109 89851138 -30433174 + (TA)n Simple_repeat Simple_repeat 1 29 0 4 1270 419 224 17 0 chr13 89852343 89852459 -30431853 + (CATATA)n Simple_repeat Simple_repeat 3 120 0 4 1270 4560 128 124 12 chr13 89853637 89853900 -30430412 + Lx3B LINE L1 6022 6340 -633 4 1270 303 28 0 0 chr13 89853900 89853936 -30430376 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 4 1270 4560 128 124 12 chr13 89853936 89854521 -30429791 + Lx3B LINE L1 6341 6965 -8 4 1270 241 302 36 108 chr13 89854995 89855162 -30429150 - MER113 DNA MER1_type -248 273 119 4 1270 704 118 14 14 chr13 89855589 89855727 -30428585 + (TA)n Simple_repeat Simple_repeat 2 139 0 4 1270 222 37 0 0 chr13 89856332 89856359 -30427953 + (TA)n Simple_repeat Simple_repeat 2 28 0 4 1270 692 262 124 28 chr13 89856405 89856833 -30427479 + L1M4 LINE L1 4318 4786 -1360 5 1270 410 319 25 25 chr13 89856843 89856965 -30427347 + ID_B1 SINE B4 95 216 -8 5 1270 259 281 38 30 chr13 89857005 89857137 -30427175 + L1M4 LINE L1 4799 4931 -1215 5 1270 336 175 0 0 chr13 89857160 89857223 -30427089 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1270 399 286 0 43 chr13 89857268 89857385 -30426927 + PB1D9 SINE Alu 3 114 -6 5 1270 1015 38 8 8 chr13 89857582 89857716 -30426596 - B1_Mm SINE Alu -1 146 13 5 1270 351 0 0 0 chr13 89858584 89858623 -30425689 + (TTA)n Simple_repeat Simple_repeat 2 40 0 5 1270 230 354 62 0 chr13 89859230 89859326 -30424986 - MIRb SINE MIR -6 262 161 5 1270 219 207 207 0 chr13 89859402 89859460 -30424852 - MIR3 SINE MIR -9 199 130 5 1270 180 0 0 0 chr13 89859642 89859662 -30424650 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1270 334 314 14 74 chr13 89859683 89859831 -30424481 + RMER4A LTR ERVK 10 148 -318 5 1270 751 182 99 12 chr13 89860213 89860385 -30423927 + B2_Mm2 SINE B2 1 187 -8 5 1270 1077 185 0 26 chr13 89860917 89861145 -30423167 + URR1B DNA MER1_type 1 222 -3 5 1270 198 0 0 0 chr13 89863025 89863047 -30421265 + (TAA)n Simple_repeat Simple_repeat 1 22 0 5 1270 301 289 40 0 chr13 89863836 89863912 -30420400 - RSINE1 SINE B4 -81 84 6 5 1270 319 288 0 48 chr13 89863935 89864019 -30420293 + ID4 SINE ID 1 80 -3 5 1270 752 252 15 18 chr13 89864084 89864280 -30420032 + ORR1D1 LTR MaLR 1 173 -201 5 1270 729 262 0 30 chr13 89864383 89864552 -30419760 + ORR1D1 LTR MaLR 211 374 0 5 1270 333 0 0 0 chr13 89865514 89865551 -30418761 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 5 1270 478 300 23 15 chr13 89866769 89866901 -30417411 + B1F2 SINE Alu 5 137 -12 5 1270 362 24 58 47 chr13 89868532 89868618 -30415694 + (TTTTTG)n Simple_repeat Simple_repeat 3 89 0 5 1270 991 67 97 0 chr13 89868619 89868753 -30415559 - B1_Mus2 SINE Alu 0 147 1 5 1270 207 0 0 0 chr13 89869100 89869123 -30415189 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 5 1270 359 320 81 27 chr13 89869888 89870134 -30414178 + L2a LINE L2 3116 3425 -1 5 1270 192 152 0 0 chr13 89870145 89870178 -30414134 + (TGGA)n Simple_repeat Simple_repeat 4 36 0 5 1270 285 339 18 9 chr13 89870717 89870830 -30413482 + PB1D10 SINE Alu 2 115 -2 5 1270 219 289 140 30 chr13 89871762 89871862 -30412450 + MIRc SINE MIR 16 126 -142 5 1270 665 186 34 0 chr13 89873539 89873657 -30410655 + RSINE1 SINE B4 4 125 -40 5 1270 252 322 13 51 chr13 89875753 89875899 -30408413 + PB1D7 SINE Alu 3 146 -3 5 1270 836 210 35 97 chr13 89876199 89876426 -30407886 - B3 SINE B2 0 216 4 5 1270 417 286 79 67 chr13 89876787 89876952 -30407360 - B3A SINE B2 -28 170 4 5 1270 209 254 18 0 chr13 89880059 89880114 -30404198 + C-rich Low_complexity Low_complexity 2 57 0 5 1270 189 107 0 0 chr13 89882020 89882048 -30402264 + (GGA)n Simple_repeat Simple_repeat 2 29 0 5 1270 261 235 0 14 chr13 89884569 89884638 -30399674 + (TCTCTG)n Simple_repeat Simple_repeat 6 73 0 5 1270 507 148 0 0 chr13 89884731 89884819 -30399493 + (TTA)n Simple_repeat Simple_repeat 2 89 0 5 1270 538 282 7 21 chr13 89884826 89884971 -30399341 - B4A SINE B4 -148 144 2 5 1270 21 71 0 0 chr13 89885092 89885134 -30399178 + AT_rich Low_complexity Low_complexity 1 42 0 5 1270 261 0 0 0 chr13 89885837 89885866 -30398446 + (TG)n Simple_repeat Simple_repeat 1 29 0 5 1270 441 0 0 0 chr13 89885886 89885935 -30398377 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1270 318 240 28 111 chr13 89887207 89887315 -30396997 + MT2B LTR ERVL 166 264 -337 5 1270 792 145 0 0 chr13 89887223 89887340 -30396972 + B1_Mus2 SINE Alu 21 137 -10 5 1270 3446 150 80 8 chr13 89888384 89888996 -30395316 - Lx4B LINE L1 -3 7055 6400 5 1270 542 312 58 131 chr13 89889114 89889442 -30394870 - MTEa LTR MaLR -6 373 70 5 1270 414 0 0 0 chr13 89889472 89889518 -30394794 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1270 186 315 109 33 chr13 89889672 89889764 -30394548 - L2 LINE L2 -650 2769 2671 5 1270 1328 47 4 16 chr13 89890033 89890290 -30394022 + (GA)n Simple_repeat Simple_repeat 1 253 0 5 1270 207 146 42 0 chr13 89890615 89890663 -30393649 + A-rich Low_complexity Low_complexity 1 50 0 5 1270 549 0 0 0 chr13 89891327 89891388 -30392924 + (TC)n Simple_repeat Simple_repeat 2 62 0 5 1270 282 29 0 0 chr13 89891398 89891433 -30392879 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1270 352 323 122 31 chr13 89891548 89891847 -30392465 - L1MA9 LINE L1 -170 6142 5813 5 1270 399 73 0 0 chr13 89891847 89891902 -30392410 + (TA)n Simple_repeat Simple_repeat 2 56 0 5 1270 352 323 122 31 chr13 89891902 89891982 -30392330 - L1MA9 LINE L1 -500 5812 5716 5 1270 198 0 0 0 chr13 89891982 89892004 -30392308 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1270 352 323 122 31 chr13 89892004 89892166 -30392146 - L1MA9 LINE L1 -597 5715 5552 5 1270 991 248 5 0 chr13 89892240 89892442 -30391870 - B3 SINE B2 -5 211 9 5 1270 306 314 45 7 chr13 89892480 89892634 -30391678 - L1MA9 LINE L1 -702 5466 5307 5 1270 808 191 21 85 chr13 89892667 89892856 -30391456 - B2_Mm2 SINE B2 -18 177 1 5 1270 673 262 119 27 chr13 89892956 89893403 -30390909 - L1MA9 LINE L1 -958 5182 4695 5 1270 678 308 48 64 chr13 89894005 89894123 -30390189 - B4 SINE B4 -1 291 172 5 1270 3935 95 18 0 chr13 89894123 89894669 -30389643 - L1_Mus2 LINE L1 -1 6565 6010 5 1270 678 308 48 64 chr13 89894669 89894845 -30389467 - B4 SINE B4 -121 171 2 5 1270 346 266 109 55 chr13 89895167 89895350 -30388962 + L1MB8 LINE L1 5163 5355 -791 5 1270 982 301 77 77 chr13 89895402 89895810 -30388502 + L1MB8 LINE L1 5388 5807 -371 5 1270 1180 42 0 7 chr13 89895810 89895954 -30388358 + B1_Mm SINE Alu 5 147 0 5 1270 982 301 77 77 chr13 89895954 89896322 -30387990 + L1MB8 LINE L1 5808 6164 -14 5 1270 206 295 39 0 chr13 89896476 89896554 -30387758 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1270 2934 82 26 16 chr13 89897011 89897434 -30386878 + Lx LINE L1 6225 6651 -3 5 1270 327 316 21 0 chr13 89897537 89897632 -30386680 + Tigger5 DNA MER2_type 2290 2386 -20 5 1270 267 342 76 95 chr13 89897676 89897980 -30386332 + MLT1J2 LTR MaLR 3 300 -148 5 1270 845 176 14 0 chr13 89900806 89900954 -30383358 - B1_Mur4 SINE Alu 0 150 1 5 1270 366 23 0 0 chr13 89901657 89901700 -30382612 + (TTCTC)n Simple_repeat Simple_repeat 1 43 0 5 1270 843 70 23 0 chr13 89901700 89901828 -30382484 + (TCTCCC)n Simple_repeat Simple_repeat 3 133 0 5 1270 183 239 0 0 chr13 89901831 89901877 -30382435 + CT-rich Low_complexity Low_complexity 107 152 0 5 1270 3916 149 57 58 chr13 89901992 89902889 -30381423 - RMER17A2 LTR ERVK -10 896 1 5 1270 1759 218 90 0 chr13 89902928 89903438 -30380874 - Lx5 LINE L1 -19 7031 6476 5 1270 360 324 54 47 chr13 89903759 89903908 -30380404 + RSINE1 SINE B4 4 153 -12 5 1270 28 29 0 0 chr13 89903958 89903993 -30380319 + AT_rich Low_complexity Low_complexity 1 35 0 5 1270 552 127 27 0 chr13 89904300 89904410 -30379902 + CT-rich Low_complexity Low_complexity 2 114 0 5 1270 312 281 73 41 chr13 89904457 89904676 -30379636 - L1M5 LINE L1 -622 5822 5597 5 1270 248 154 0 19 chr13 89904678 89904731 -30379581 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 5 1270 29 0 0 0 chr13 89906779 89906808 -30377504 + AT_rich Low_complexity Low_complexity 1 29 0 5 1270 24428 155 15 9 chr13 89906898 89912286 -30372026 + L1_Mus4 LINE L1 548 5968 -668 5 1270 1191 62 0 0 chr13 89912286 89912430 -30371882 + B1_Mus2 SINE Alu 2 145 -2 5 1270 846 30 0 0 chr13 89912430 89912531 -30371781 + (GAA)n Simple_repeat Simple_repeat 2 102 0 5 1270 6700 103 5 6 chr13 89912531 89913161 -30371151 + L1_Mus4 LINE L1 5969 6596 -40 5 1270 414 317 42 12 chr13 89913962 89914128 -30370184 + MER102a DNA MER1_type 123 293 -37 5 1270 262 232 0 0 chr13 89914303 89914359 -30369953 - L2c LINE L2 -1 3386 3331 5 158 3784 87 7 25 chr13 89915091 89915648 -30368664 + L1_Mus3 LINE L1 6092 6638 0 5 1271 672 321 66 27 chr13 89915762 89916095 -30368217 + MLT1A1 LTR MaLR 59 404 -4 5 1271 791 309 85 50 chr13 89916104 89916503 -30367809 - MLT1C LTR MaLR -2 465 53 5 1271 627 136 162 207 chr13 89917046 89917268 -30367044 + B3 SINE B2 2 213 -3 5 1271 21 57 0 0 chr13 89917274 89917309 -30367003 + AT_rich Low_complexity Low_complexity 1 35 0 5 1271 1611 184 72 19 chr13 89917349 89917709 -30366603 + Lx5 LINE L1 6671 7049 -1 5 1271 227 318 0 0 chr13 89918202 89918268 -30366044 - Helitron3Na_Mam RC Helitron -1 485 420 5 1271 234 0 0 0 chr13 89919148 89919174 -30365138 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1271 1243 67 17 0 chr13 89920317 89920559 -30363753 + (TTTC)n Simple_repeat Simple_repeat 1 246 0 5 1271 420 130 0 0 chr13 89920737 89920806 -30363506 + (CTCA)n Simple_repeat Simple_repeat 2 70 0 5 1271 1036 163 47 47 chr13 89921497 89921729 -30362583 + Lx4A LINE L1 6827 7058 0 5 1271 209 238 0 0 chr13 89922209 89922251 -30362061 + (TA)n Simple_repeat Simple_repeat 2 43 0 5 1271 511 246 120 0 chr13 89922711 89922878 -30361434 - MER121 Unknown Unknown -22 390 204 5 1271 27 29 0 0 chr13 89922995 89923029 -30361283 + AT_rich Low_complexity Low_complexity 1 34 0 5 1271 423 0 0 0 chr13 89923078 89923125 -30361187 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1271 3205 69 55 5 chr13 89923993 89924429 -30359883 + L1Md_F2 LINE L1 6111 6568 -14 5 1271 444 353 13 19 chr13 89924716 89924872 -30359440 + RSINE1 SINE B4 3 157 -8 5 1271 270 323 124 41 chr13 89924872 89924910 -30359402 + B3 SINE B2 2 211 -5 5 1271 519 233 0 0 chr13 89924984 89925113 -30359199 + A-rich Low_complexity Low_complexity 52 180 0 5 1271 624 215 50 0 chr13 89926167 89926288 -30358024 - B3 SINE B2 -7 209 83 5 1271 253 326 34 55 chr13 89927082 89927228 -30357084 - L2a LINE L2 0 3426 3284 5 1271 951 35 0 0 chr13 89927635 89927750 -30356562 + (TA)n Simple_repeat Simple_repeat 1 115 0 5 1271 422 299 74 55 chr13 89928374 89928576 -30355736 + L1MC4a LINE L1 7472 7677 -205 5 1271 409 236 11 22 chr13 89928965 89929147 -30355165 + (TATG)n Simple_repeat Simple_repeat 1 180 0 6 1271 387 0 0 0 chr13 89929169 89929212 -30355100 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 1271 829 313 80 6 chr13 89930438 89930788 -30353524 - Lx8 LINE L1 -274 7199 6824 6 1271 629 348 85 35 chr13 89932877 89933252 -30351060 + MLT1I LTR MaLR 13 406 -5 6 1271 576 321 60 35 chr13 89933251 89933451 -30350861 - MER58C DNA MER1_type -5 210 6 6 1271 545 293 29 87 chr13 89933510 89933674 -30350638 + B3A SINE B2 22 187 -29 6 1271 378 0 0 0 chr13 89933674 89933716 -30350596 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1271 482 293 29 87 chr13 89933716 89933758 -30350554 + B3 SINE B2 188 216 0 6 1271 627 267 27 0 chr13 89934706 89934856 -30349456 - MTEa LTR MaLR -225 154 1 6 1271 598 301 28 69 chr13 89935246 89935471 -30348841 - ID_B1 SINE B4 -8 216 14 6 1271 337 155 9 93 chr13 89935497 89935604 -30348708 - Lx9 LINE L1 -15 7629 7532 6 1271 32 0 0 0 chr13 89936053 89936085 -30348227 + AT_rich Low_complexity Low_complexity 1 32 0 6 1271 206 352 87 12 chr13 89936491 89936652 -30347660 - MIRb SINE MIR -24 244 72 6 1271 22 0 0 0 chr13 89936955 89936977 -30347335 + AT_rich Low_complexity Low_complexity 1 22 0 6 1271 298 278 45 18 chr13 89938514 89938624 -30345688 - MIR SINE MIR -85 177 65 6 1271 568 272 119 72 chr13 89940147 89940178 -30344134 - MT2A LTR ERVL 0 601 561 6 1271 252 0 0 0 chr13 89940178 89940206 -30344106 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1271 686 273 129 77 chr13 89940206 89940607 -30343705 - MT2A LTR ERVL -41 560 1 6 1271 331 161 0 0 chr13 89940607 89940663 -30343649 - MERVL_2A-int LTR ERVL 0 5761 5706 6 1271 315 217 0 42 chr13 89940663 89940735 -30343577 - ORR1A3-int LTR MaLR -1324 639 571 6 1271 556 288 90 106 chr13 89940729 89940985 -30343327 + B4 SINE B4 41 292 0 6 1271 195 204 0 0 chr13 89940986 89941035 -30343277 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1271 373 353 7 0 chr13 89941063 89941213 -30343099 + (CA)n Simple_repeat Simple_repeat 1 151 0 6 1271 191 204 163 0 chr13 89941392 89941441 -30342871 - L2a LINE L2 -18 3408 3352 6 1271 1038 66 0 0 chr13 89942353 89942489 -30341823 - B1_Mus1 SINE Alu -7 141 6 6 1271 414 0 0 0 chr13 89942501 89942547 -30341765 + (TTTTG)n Simple_repeat Simple_repeat 5 50 0 6 1271 422 294 77 10 chr13 89942919 89943164 -30341148 + Lx9 LINE L1 6385 6796 -848 6 1271 16529 70 17 2 chr13 89943164 89946122 -30338190 - L1Md_F2 LINE L1 -12 6570 3569 6 1271 2176 124 33 6 chr13 89946118 89946618 -30337694 - L1Md_F LINE L1 -5590 1029 381 6 1271 981 127 6 6 chr13 89946623 89946790 -30337522 - L1VL1 LINE L1 -6156 266 100 6 1271 361 264 22 104 chr13 89946790 89946810 -30337502 - RSINE1 SINE B4 -38 127 4 6 1271 891 70 0 0 chr13 89946810 89946925 -30337387 - B2_Mm1a SINE B2 -76 117 3 6 1271 1601 121 23 8 chr13 89946926 89947192 -30337120 - L1VL1 LINE L1 -6152 270 1 6 1271 1000 301 93 43 chr13 89947203 89947825 -30336487 + Lx9 LINE L1 6786 7438 -206 6 1271 212 213 66 0 chr13 89947840 89947901 -30336411 + GA-rich Low_complexity Low_complexity 2 66 0 6 1271 315 0 0 0 chr13 89948059 89948094 -30336218 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 6 1271 267 286 14 0 chr13 89948577 89948647 -30335665 - ID4 SINE ID -11 72 2 6 1271 555 276 90 19 chr13 89948657 89949032 -30335280 - L1MB2 LINE L1 -53 6118 5704 6 1271 473 231 0 0 chr13 89949137 89949215 -30335097 - RLTR20A2 LTR ERVK -10 568 491 6 1271 432 0 0 0 chr13 89949216 89949264 -30335048 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1271 2760 101 26 5 chr13 89949265 89949692 -30334620 - BGLII_B LTR ERVK 0 441 6 6 1271 363 23 0 0 chr13 89949692 89949736 -30334576 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1271 324 350 129 32 chr13 89949950 89950298 -30334014 - HAL1 LINE L1 -1323 1184 803 6 1271 1295 44 0 0 chr13 89950767 89950926 -30333386 + L1Md_F2 LINE L1 5983 6141 -441 6 1271 25 75 0 0 chr13 89950926 89950979 -30333333 + AT_rich Low_complexity Low_complexity 1 53 0 6 1271 7153 119 84 12 chr13 89950982 89952228 -30332084 - Lx2 LINE L1 -14 6983 5648 6 1271 312 433 14 54 chr13 89952329 89952551 -30331761 + LTR33A LTR ERVL 3 215 -305 6 1271 243 122 0 0 chr13 89953300 89953349 -30330963 + (T)n Simple_repeat Simple_repeat 1 49 0 6 1271 359 319 78 0 chr13 89955094 89955210 -30329102 - B3 SINE B2 -80 136 12 6 1271 37 69 0 0 chr13 89955470 89955542 -30328770 + AT_rich Low_complexity Low_complexity 1 72 0 6 1271 19393 152 99 12 chr13 89955556 89960391 -30323921 + L1_Mus4 LINE L1 712 6007 -629 6 1271 2600 141 9 35 chr13 89960391 89960847 -30323465 + L1_Mus4 LINE L1 6203 6646 -8 6 1271 43 0 0 0 chr13 89960847 89960890 -30323422 + AT_rich Low_complexity Low_complexity 1 43 0 6 1271 287 356 52 9 chr13 89962153 89962269 -30322043 + B4 SINE B4 24 144 -148 6 1271 414 0 0 0 chr13 89962345 89962391 -30321921 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1271 535 335 59 4 chr13 89962669 89962924 -30321388 - Charlie23a DNA MER1_type -68 271 3 6 1271 2089 182 21 19 chr13 89963614 89964044 -30320268 + BGLII_B LTR ERVK 1 431 -10 6 1271 2565 166 54 63 chr13 89964262 89964504 -30319808 - RMER4B LTR ERVK 0 585 336 6 1271 1214 95 6 0 chr13 89964504 89964683 -30319629 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 1271 2565 166 54 63 chr13 89964683 89965030 -30319282 - RMER4B LTR ERVK -250 335 1 6 1271 221 30 61 0 chr13 89965537 89965570 -30318742 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 6 1271 533 111 0 20 chr13 89965592 89965693 -30318619 + (CATA)n Simple_repeat Simple_repeat 2 100 0 6 1271 464 141 48 28 chr13 89965710 89965966 -30318346 + (CAGA)n Simple_repeat Simple_repeat 1 261 0 6 1271 786 172 17 11 chr13 89966008 89966184 -30318128 + GA-rich Low_complexity Low_complexity 3 179 0 6 1271 289 254 28 0 chr13 89966552 89966623 -30317689 + GA-rich Low_complexity Low_complexity 5 77 0 6 1271 213 369 15 0 chr13 89967122 89967187 -30317125 + ID4 SINE ID 18 83 0 6 1271 246 62 0 0 chr13 89967623 89967655 -30316657 + (TC)n Simple_repeat Simple_repeat 2 33 0 6 1271 267 340 195 0 chr13 89968381 89968540 -30315772 - MIR SINE MIR -66 196 7 6 1271 181 310 17 0 chr13 89968910 89968968 -30315344 - L2 LINE L2 -1362 2057 1999 6 1271 28 0 0 0 chr13 89969521 89969549 -30314763 + AT_rich Low_complexity Low_complexity 1 28 0 6 1271 7225 44 2 1 chr13 89969549 89970477 -30313835 - L1Md_F2 LINE L1 -3 6579 5651 6 1271 226 374 83 9 chr13 89971222 89971330 -30312982 - PB1D9 SINE Alu 0 120 5 6 1271 267 322 88 34 chr13 89971342 89971490 -30312822 - MLT1A LTR MaLR -212 162 7 6 1271 215 344 54 42 chr13 89971633 89971800 -30312512 - L2 LINE L2 -1336 2083 1915 6 1271 957 201 5 0 chr13 89973471 89973670 -30310642 + Lx9 LINE L1 7191 7390 -254 6 1271 612 140 0 9 chr13 89973673 89973781 -30310531 - RLTR16 LTR ERVK 0 505 399 6 1271 916 80 14 7 chr13 89973784 89973923 -30310389 + (TTTC)n Simple_repeat Simple_repeat 1 140 0 6 1271 1350 134 40 5 chr13 89973939 89974163 -30310149 - Lx LINE L1 -9 6645 6414 6 1271 733 144 8 0 chr13 89974165 89974283 -30310029 + RLTR31A_Mm LTR ERVK 10 128 -456 6 1271 861 152 7 13 chr13 89974276 89974429 -30309883 - RLTR31A_Mm LTR ERVK -432 152 1 6 1271 267 109 22 0 chr13 89974429 89974475 -30309837 - Lx LINE L1 -228 6426 6380 6 1271 3923 180 50 5 chr13 89974532 89975298 -30309014 - Lx4B LINE L1 -4 7054 6255 6 1271 7151 167 40 31 chr13 89975298 89976451 -30307861 - L1_Mur2 LINE L1 -1827 4050 2883 6 1271 1368 67 0 0 chr13 89976451 89976631 -30307681 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1271 7151 167 40 31 chr13 89976631 89977112 -30307200 - L1_Mur2 LINE L1 -2995 2882 2403 6 1271 270 306 108 62 chr13 89977668 89977797 -30306515 + B3A SINE B2 64 198 0 6 1271 254 294 0 68 chr13 89977946 89978019 -30306293 + RSINE1 SINE B4 3 70 -95 6 1271 511 167 30 18 chr13 89978530 89978695 -30305617 + CT-rich Low_complexity Low_complexity 2 168 0 6 1271 283 311 83 19 chr13 89980387 89980495 -30303817 + L2b LINE L2 3261 3375 0 6 1271 364 299 57 37 chr13 89981480 89981614 -30302698 - B1F SINE Alu 0 150 13 6 1271 609 14 0 0 chr13 89981638 89981708 -30302604 + (TC)n Simple_repeat Simple_repeat 1 70 0 6 1271 26266 127 21 7 chr13 89982284 89988246 -30296066 - L1_Mus3 LINE L1 -1 6637 609 6 1271 417 259 68 34 chr13 89988304 89988452 -30295860 - Lx8 LINE L1 -58 7415 7263 6 1271 24 32 0 0 chr13 89989106 89989137 -30295175 + AT_rich Low_complexity Low_complexity 1 31 0 6 1271 2843 209 66 60 chr13 89989140 89989978 -30294334 - Lx7 LINE L1 0 7696 6854 6 1271 197 326 67 11 chr13 89990529 89990619 -30293693 + MIRb SINE MIR 122 216 -52 6 1271 477 76 0 0 chr13 89991066 89991132 -30293180 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1271 244 231 19 0 chr13 89991823 89991875 -30292437 + B1_Mus1 SINE Alu 2 54 -94 6 1271 541 173 45 0 chr13 89991989 89992099 -30292213 - Lx9 LINE L1 -630 7014 6900 6 1271 1436 207 253 0 chr13 89992098 89992596 -30291716 + Lx9 LINE L1 7019 7642 -2 6 1271 281 297 123 43 chr13 89992966 89993331 -30290981 + L1ME3B LINE L1 5561 5954 -286 6 1271 221 346 36 36 chr13 89994414 89994525 -30289787 + PB1D7 SINE Alu 10 120 0 6 1271 28 0 0 0 chr13 89994778 89994806 -30289506 + AT_rich Low_complexity Low_complexity 1 28 0 6 1271 377 309 8 47 chr13 89995337 89995466 -30288846 + RSINE1 SINE B4 2 125 -40 6 1271 257 312 0 0 chr13 89996269 89996349 -30287963 + (TA)n Simple_repeat Simple_repeat 1 80 0 6 1271 279 0 0 0 chr13 89996462 89996493 -30287819 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 6 1271 296 293 203 17 chr13 89996893 89997070 -30287242 - MLT1D LTR MaLR -4 501 292 6 1271 231 364 6 94 chr13 89997171 89997341 -30286971 - MLT1D LTR MaLR -462 165 11 6 1271 256 136 15 0 chr13 89999188 89999254 -30285058 - L1_Mus4 LINE L1 -10 6626 6560 6 1271 1017 80 0 0 chr13 89999251 89999401 -30284911 + MusHAL1 LINE L1 1239 1388 -1324 6 1271 3581 135 37 12 chr13 89999399 90000000 -30284312 - L1_Mus4 LINE L1 -136 6500 5885 6 1271 6841 148 5 0 chr13 90000001 90001114 -30283198 - L1_Mm LINE L1 0 5883 4766 1 1271 3240 96 2 0 chr13 90001110 90001591 -30282721 + MusHAL1 LINE L1 1593 2074 -638 2 1271 35402 35 0 0 chr13 90001594 90006974 -30277338 + L1Md_T LINE L1 113 5589 -297 3 1271 8893 9 0 0 chr13 90006974 90007970 -30276342 + L1Md_T LINE L1 5590 6585 0 3 1271 294 98 0 0 chr13 90007974 90008025 -30276287 + (A)n Simple_repeat Simple_repeat 1 51 0 4 1271 9310 140 12 11 chr13 90008025 90009621 -30274691 + L1_Mm LINE L1 3251 4848 -1035 5 1271 245 308 21 42 chr13 90010247 90010342 -30273970 - RSINE1 SINE B4 0 165 73 6 1271 257 256 35 35 chr13 90010937 90011022 -30273290 - ID_B1 SINE B4 -2 222 138 7 1271 225 0 0 0 chr13 90011321 90011346 -30272966 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 8 1271 1437 262 71 14 chr13 90011498 90011923 -30272389 - Lx6 LINE L1 -16 7444 6996 9 1271 2443 68 3 0 chr13 90013162 90013483 -30270829 - L1Md_F2 LINE L1 -564 6018 5697 1 1271 4376 76 0 12 chr13 90013483 90014080 -30270232 + L1Md_F2 LINE L1 5993 6582 0 1 1271 249 33 0 0 chr13 90014347 90014377 -30269935 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 1 1271 444 146 0 0 chr13 90014840 90014929 -30269383 + (GA)n Simple_repeat Simple_repeat 2 90 0 1 1271 28 91 0 0 chr13 90015116 90015193 -30269119 + AT_rich Low_complexity Low_complexity 1 77 0 1 1271 414 0 0 0 chr13 90015337 90015383 -30268929 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1271 49 18 0 0 chr13 90015721 90015777 -30268535 + AT_rich Low_complexity Low_complexity 1 56 0 1 1271 244 296 12 0 chr13 90015985 90016066 -30268246 - L1M5 LINE L1 -1971 4175 4094 1 1271 433 238 117 62 chr13 90016300 90016573 -30267739 - L1MA9 LINE L1 -38 6274 5987 1 1271 2270 182 53 26 chr13 90016650 90017119 -30267193 + RLTR11A LTR ERVK 47 528 0 1 1271 21 0 0 0 chr13 90017597 90017618 -30266694 + AT_rich Low_complexity Low_complexity 1 21 0 1 1271 370 326 104 0 chr13 90017631 90017766 -30266546 - B3 SINE B2 -66 150 2 2 1271 196 270 32 0 chr13 90018218 90018281 -30266031 + MIR SINE MIR 195 259 -3 2 1271 498 285 137 28 chr13 90018304 90018669 -30265643 + L1ME1 LINE L1 5762 6162 -2 2 1271 1001 93 0 0 chr13 90019278 90019417 -30264895 - B1_Mm SINE Alu 0 147 9 2 1271 500 220 65 84 chr13 90019284 90019438 -30264874 - B4A SINE B4 -71 221 71 2 1271 242 280 60 119 chr13 90019438 90019517 -30264795 + YREP_Mm Unknown Unknown 182 400 -1412 2 1271 24 32 0 0 chr13 90019533 90019564 -30264748 + AT_rich Low_complexity Low_complexity 1 31 0 2 1271 457 321 14 14 chr13 90019603 90019745 -30264567 + B1F SINE Alu 5 146 -3 2 1271 355 277 0 0 chr13 90020023 90020106 -30264206 - BC1_Mm scRNA scRNA -69 83 1 2 1271 265 293 69 85 chr13 90022614 90022790 -30261522 - MLT1D LTR MaLR -272 233 59 2 1271 349 375 12 42 chr13 90023041 90023208 -30261104 - RSINE1 SINE B4 -2 163 2 3 1271 22 0 0 0 chr13 90023556 90023578 -30260734 + AT_rich Low_complexity Low_complexity 1 22 0 3 1271 309 252 129 36 chr13 90024658 90024751 -30259561 - L1_Mm LINE L1 -579 5712 5607 3 1271 686 251 78 49 chr13 90024751 90024956 -30259356 - B3 SINE B2 -5 211 1 3 1271 373 291 391 7 chr13 90024956 90025193 -30259119 - L1_Mm LINE L1 -685 5606 5311 3 1271 364 300 70 163 chr13 90025508 90025735 -30258577 - MLT1D LTR MaLR -12 493 178 3 1271 280 259 59 0 chr13 90025811 90025896 -30258416 - MLT1D LTR MaLR -370 135 46 3 1271 28 61 0 0 chr13 90026061 90026110 -30258202 + AT_rich Low_complexity Low_complexity 1 49 0 3 1271 21 0 0 0 chr13 90026663 90026684 -30257628 + AT_rich Low_complexity Low_complexity 1 21 0 3 1271 23 0 0 0 chr13 90027008 90027031 -30257281 + AT_rich Low_complexity Low_complexity 1 23 0 3 1271 372 301 99 57 chr13 90030542 90030683 -30253629 - RSINE1 SINE B4 -1 164 18 3 1271 583 226 40 66 chr13 90030982 90031209 -30253103 - Lx9 LINE L1 -7 7637 7417 3 1271 6126 181 55 2 chr13 90031207 90032819 -30251493 + Lx4B LINE L1 5252 6978 -80 4 1271 306 123 0 0 chr13 90032880 90032937 -30251375 + (CATA)n Simple_repeat Simple_repeat 2 58 0 4 1271 300 188 75 127 chr13 90032948 90033082 -30251230 + L1MC3 LINE L1 7652 7778 -7 4 1271 240 129 95 16 chr13 90033349 90033412 -30250900 + (TTAAA)n Simple_repeat Simple_repeat 2 69 0 4 1271 2745 80 13 0 chr13 90033416 90033792 -30250520 - L1_Mm LINE L1 -1312 4571 4191 4 1271 8176 131 10 21 chr13 90034795 90036179 -30248133 - L1_Mus4 LINE L1 -696 5187 3819 4 1271 6982 121 20 12 chr13 90036177 90037630 -30246682 + L1_Mus4 LINE L1 5164 6631 -5 4 1271 363 174 0 0 chr13 90037839 90037925 -30246387 + Lx9 LINE L1 7551 7636 -8 4 1271 307 330 62 44 chr13 90039036 90039261 -30245051 + L1M5 LINE L1 2205 2433 -3713 4 1271 407 19 19 0 chr13 90040273 90040325 -30243987 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1271 814 120 0 0 chr13 90040356 90040489 -30243823 + L1_Mus4 LINE L1 6497 6629 -7 4 1271 203 336 66 16 chr13 90040591 90040712 -30243600 + L2 LINE L2 2725 2851 -568 5 1271 551 269 92 67 chr13 90040750 90040989 -30243323 + RLTR12B LTR ERVK 54 298 -230 5 1271 508 296 68 32 chr13 90040993 90041241 -30243071 + RLTR12B LTR ERVK 241 497 -31 5 1271 616 281 47 62 chr13 90042032 90042459 -30241853 + ORR1D1 LTR MaLR 5 394 0 5 1271 5366 234 106 53 chr13 90042546 90044205 -30240107 + Lx7 LINE L1 5951 7696 0 5 1271 214 268 18 0 chr13 90044717 90044773 -30239539 + GA-rich Low_complexity Low_complexity 5 61 0 5 1271 24 0 0 0 chr13 90045204 90045228 -30239084 + AT_rich Low_complexity Low_complexity 1 24 0 5 1271 463 302 24 36 chr13 90045797 90045962 -30238350 - RSINE1 SINE B4 0 165 3 5 1271 334 347 61 0 chr13 90046305 90046403 -30237909 + RSINE1 SINE B4 48 151 -14 5 1272 551 239 38 87 chr13 90046687 90046870 -30237442 - B3A SINE B2 -21 174 1 5 1272 194 339 101 59 chr13 90046870 90046989 -30237323 - MIRc SINE MIR -112 156 33 6 1272 4176 247 72 56 chr13 90048130 90049880 -30234432 + Lx4B LINE L1 5256 7029 -29 6 1272 210 71 0 0 chr13 90049896 90049924 -30234388 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 6 1272 642 271 95 40 chr13 90050491 90050691 -30233621 + ID_B1 SINE B4 13 223 -1 6 1272 298 255 98 18 chr13 90051400 90051512 -30232800 + MLT2C1 LTR ERVL 219 339 -58 6 1272 293 358 7 13 chr13 90051994 90052144 -30232168 - RSINE1 SINE B4 -13 152 4 6 1272 413 71 33 58 chr13 90052315 90052356 -30231956 + T-rich Low_complexity Low_complexity 82 121 0 6 1272 1103 28 48 28 chr13 90052356 90052501 -30231811 - B1_Mus1 SINE Alu 0 148 1 6 1272 413 71 33 58 chr13 90052501 90052579 -30231733 + T-rich Low_complexity Low_complexity 5 81 0 6 1272 828 181 15 0 chr13 90053031 90053164 -30231148 + B1_Mur3 SINE Alu 2 136 -13 6 1272 180 0 0 0 chr13 90053167 90053187 -30231125 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 1272 820 296 66 48 chr13 90054318 90054651 -30229661 + Lx8 LINE L1 7066 7404 -69 7 1272 565 331 0 0 chr13 90056273 90056436 -30227876 + RSINE1 SINE B4 3 165 0 7 1272 31 58 0 0 chr13 90056463 90056515 -30227797 + AT_rich Low_complexity Low_complexity 1 52 0 7 1272 540 45 0 0 chr13 90057025 90057092 -30227220 + (TATG)n Simple_repeat Simple_repeat 2 68 0 7 1272 236 278 0 53 chr13 90057092 90057149 -30227163 - B1F SINE Alu -9 140 87 7 1272 270 345 27 75 chr13 90057400 90057588 -30226724 + MLT1A0 LTR MaLR 28 206 -202 7 1272 1384 193 51 125 chr13 90057749 90058158 -30226154 + RLTR41 LTR ERV1 1 379 -67 7 1272 576 161 12 37 chr13 90058159 90058320 -30225992 + GA-rich Low_complexity Low_complexity 2 158 0 7 1272 1890 167 113 0 chr13 90058326 90058697 -30225615 - MTC LTR MaLR -8 413 1 7 1272 406 305 33 13 chr13 90058705 90058858 -30225454 + MLT1A0 LTR MaLR 209 364 -1 7 1272 960 161 16 5 chr13 90059798 90059986 -30224326 - Lx2 LINE L1 0 6997 6808 8 1272 1454 236 79 0 chr13 90060023 90060366 -30223946 + MT2A LTR ERVL 4 373 -160 8 1272 345 47 0 0 chr13 90060629 90060672 -30223640 + (TG)n Simple_repeat Simple_repeat 2 44 0 8 1272 687 257 7 0 chr13 90060673 90060812 -30223500 + MTE-int LTR MaLR 303 442 -1138 8 1272 1245 275 38 32 chr13 90060812 90061158 -30223154 - MTEb LTR MaLR -1 378 31 8 1272 2016 325 94 28 chr13 90061155 90061244 -30223068 + MTE-int LTR MaLR 463 563 -1017 8 1272 1658 191 60 17 chr13 90061244 90061596 -30222716 - ORR1B2 LTR MaLR 0 367 1 8 1272 2016 325 94 28 chr13 90061596 90062297 -30222015 + MTE-int LTR MaLR 564 1305 -275 8 1272 557 211 32 0 chr13 90062360 90062483 -30221829 + L1_Mur3 LINE L1 5319 5445 -435 8 1272 660 219 40 0 chr13 90062493 90062644 -30221668 - L1_Mur3 LINE L1 -3071 2809 2653 8 1272 17670 85 29 4 chr13 90062668 90063058 -30221254 - L1VL4 LINE L1 0 3559 3161 8 1272 384 288 168 43 chr13 90063058 90063385 -30220927 + RLTR9A LTR ERVK 1 368 0 8 1272 17670 92 23 5 chr13 90063385 90066440 -30217872 - L1VL4 LINE L1 -399 3160 52 8 1272 1108 247 127 52 chr13 90066430 90067046 -30217266 - L1_Mur3 LINE L1 -3207 2673 2012 9 1272 474 208 59 10 chr13 90067046 90067148 -30217164 - U6 snRNA snRNA 0 107 1 9 1272 351 212 0 0 chr13 90067289 90067369 -30216943 + (TA)n Simple_repeat Simple_repeat 2 81 0 9 1272 186 43 0 0 chr13 90067809 90067832 -30216480 + (TAAAAA)n Simple_repeat Simple_repeat 1 23 0 9 1272 520 167 35 0 chr13 90068140 90068284 -30216028 + (TA)n Simple_repeat Simple_repeat 2 150 0 9 1272 24 0 0 0 chr13 90068295 90068319 -30215993 + AT_rich Low_complexity Low_complexity 1 24 0 9 1272 26 0 0 0 chr13 90068450 90068476 -30215836 + AT_rich Low_complexity Low_complexity 1 26 0 9 1272 36 40 0 0 chr13 90068903 90068953 -30215359 + AT_rich Low_complexity Low_complexity 1 50 0 9 1272 25 0 0 0 chr13 90069755 90069780 -30214532 + AT_rich Low_complexity Low_complexity 1 25 0 9 1272 279 0 0 0 chr13 90070476 90070507 -30213805 + (TATG)n Simple_repeat Simple_repeat 2 32 0 9 1272 29 0 0 0 chr13 90070584 90070613 -30213699 + AT_rich Low_complexity Low_complexity 1 29 0 1 1272 354 143 0 0 chr13 90070846 90070909 -30213403 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1272 234 176 0 0 chr13 90071613 90071664 -30212648 + T-rich Low_complexity Low_complexity 1 51 0 1 1272 225 0 0 0 chr13 90071823 90071848 -30212464 + (CAGAGA)n Simple_repeat Simple_repeat 6 30 0 1 1272 21 0 0 0 chr13 90073196 90073217 -30211095 + AT_rich Low_complexity Low_complexity 1 21 0 1 1272 591 51 0 0 chr13 90073222 90073301 -30211011 + (TG)n Simple_repeat Simple_repeat 1 79 0 1 1272 324 0 0 0 chr13 90073301 90073336 -30210976 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 1272 656 254 49 34 chr13 90073444 90073648 -30210664 + B3 SINE B2 5 211 -5 1 1272 2550 279 32 46 chr13 90074724 90075310 -30209002 - Lx7 LINE L1 -478 7218 6634 1 1272 1165 56 0 0 chr13 90075310 90075453 -30208859 + B1_Mus2 SINE Alu 2 144 -3 1 1272 2550 279 32 46 chr13 90075453 90075730 -30208582 - Lx7 LINE L1 -1063 6633 6367 1 1272 1776 177 111 24 chr13 90076639 90077010 -30207302 + MTB_Mm LTR MaLR 1 403 -4 1 1272 665 254 125 36 chr13 90077074 90077266 -30207046 - ID_B1 SINE B4 -7 217 9 1 1272 516 32 0 0 chr13 90077511 90077573 -30206739 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 1272 350 294 85 35 chr13 90078885 90079026 -30205286 - B1F SINE Alu -1 148 1 1 1272 1213 73 0 0 chr13 90079203 90079367 -30204945 + L1_Mus2 LINE L1 6401 6564 -2 1 1272 476 185 56 0 chr13 90079544 90079652 -30204660 - Lx9 LINE L1 -9 7635 7522 1 1272 267 103 0 0 chr13 90079688 90079727 -30204585 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1 1272 274 343 70 21 chr13 90079738 90079881 -30204431 - Charlie1a DNA MER1_type -270 1185 1036 1 1272 25 65 0 0 chr13 90080065 90080111 -30204201 + AT_rich Low_complexity Low_complexity 1 46 0 1 1272 23 68 0 0 chr13 90080721 90080765 -30203547 + AT_rich Low_complexity Low_complexity 1 44 0 1 1272 272 152 15 0 chr13 90081364 90081430 -30202882 + (CA)n Simple_repeat Simple_repeat 2 68 0 1 1272 453 243 36 29 chr13 90081706 90081846 -30202466 - B1_Mur1 SINE Alu -8 141 1 1 1272 1023 128 0 0 chr13 90081883 90082031 -30202281 + B1_Mus1 SINE Alu 1 148 0 1 1272 207 0 0 0 chr13 90082042 90082065 -30202247 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1272 226 354 0 0 chr13 90082149 90082228 -30202084 + Tigger9a DNA Tigger 495 573 -159 1 1272 285 135 0 0 chr13 90082398 90082450 -30201862 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 1272 3751 255 62 8 chr13 90082512 90083571 -30200741 + Lx7 LINE L1 6581 7696 0 1 1272 976 108 0 57 chr13 90083573 90083714 -30200598 + B1_Mus1 SINE Alu 1 137 -11 1 1272 180 0 0 0 chr13 90083714 90083734 -30200578 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1272 976 108 0 57 chr13 90083734 90083749 -30200563 + B1_Mus1 SINE Alu 138 148 0 1 1272 684 0 0 0 chr13 90084299 90084375 -30199937 + (GAAA)n Simple_repeat Simple_repeat 4 79 0 1 1272 234 146 35 35 chr13 90084408 90084465 -30199847 + (TTTG)n Simple_repeat Simple_repeat 4 60 0 1 1272 473 247 118 84 chr13 90084482 90084685 -30199627 + Lx6 LINE L1 6758 6967 -493 1 1272 1112 262 19 19 chr13 90084807 90085114 -30199198 + Lx6 LINE L1 7018 7324 -136 1 1272 1076 71 0 0 chr13 90085127 90085268 -30199044 - B1_Mus1 SINE Alu 0 148 8 1 1272 409 201 54 95 chr13 90085271 90085330 -30198982 + Lx6 LINE L1 7319 7382 -78 1 1272 1953 169 236 65 chr13 90085330 90085918 -30198394 - RMER6C LTR ERVK -1 689 1 1 1272 409 201 54 95 chr13 90085918 90086006 -30198306 + Lx6 LINE L1 7383 7460 0 1 1272 248 333 12 58 chr13 90088418 90088504 -30195808 - ID SINE ID -141 83 2 1 1272 5913 145 68 14 chr13 90089597 90090690 -30193622 + L1_Mur2 LINE L1 3948 5099 -778 1 1272 188 359 74 20 chr13 90091368 90091516 -30192796 + L2c LINE L2 3059 3214 -173 1 1272 3646 112 42 13 chr13 90092442 90092993 -30191319 - Lx LINE L1 -18 6636 6070 1 1272 327 25 0 0 chr13 90093123 90093163 -30191149 - MTB LTR MaLR 0 400 361 1 1272 7523 80 9 69 chr13 90093164 90094332 -30189980 + MTB-int LTR MaLR 1 1098 0 1 1272 2953 80 5 2 chr13 90094332 90094731 -30189581 + MTB LTR MaLR 1 400 0 1 1272 357 239 53 23 chr13 90095909 90096042 -30188270 + L1MEb LINE L1 516 652 -5418 1 1272 3470 38 0 0 chr13 90096108 90096527 -30187785 - L1Md_T LINE L1 0 6582 6164 1 1272 928 265 48 97 chr13 90097047 90097440 -30186872 + ORR1D1 LTR MaLR 1 374 0 1 1272 348 83 0 0 chr13 90097558 90097606 -30186706 + (TATG)n Simple_repeat Simple_repeat 2 49 0 1 1272 239 79 0 26 chr13 90098161 90098200 -30186112 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 1272 318 50 0 0 chr13 90098200 90098240 -30186072 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1272 204 242 0 29 chr13 90098477 90098545 -30185767 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 1 1272 186 43 0 0 chr13 90098919 90098942 -30185370 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1272 5947 53 3 1 chr13 90099102 90099852 -30184460 + L1Md_F2 LINE L1 5829 6579 -3 1 1272 531 275 112 57 chr13 90100035 90100289 -30184023 + L1MA4A LINE L1 5542 5817 -486 1 1272 543 249 207 11 chr13 90100289 90100468 -30183844 + B3 SINE B2 1 214 -2 1 1272 531 275 112 57 chr13 90100468 90100580 -30183732 + L1MA4A LINE L1 5818 5928 -375 1 1272 765 61 0 0 chr13 90100753 90100852 -30183460 + (GGAGA)n Simple_repeat Simple_repeat 3 101 0 1 1272 2486 177 27 146 chr13 90100913 90101606 -30182706 + RMER19C LTR ERVK 1 611 0 1 1272 35 0 0 0 chr13 90101619 90101654 -30182658 + AT_rich Low_complexity Low_complexity 1 35 0 1 1272 191 333 102 11 chr13 90101751 90101839 -30182473 - L4 LINE RTE -159 1870 1775 1 1272 22 35 0 0 chr13 90102378 90102407 -30181905 + AT_rich Low_complexity Low_complexity 1 29 0 1 1272 350 262 12 24 chr13 90102482 90102564 -30181748 + B1_Mus2 SINE Alu 1 81 -66 1 1272 437 335 17 113 chr13 90104402 90104623 -30179689 + B3A SINE B2 9 211 -5 1 1272 227 83 67 0 chr13 90104882 90104942 -30179370 + (TTTTG)n Simple_repeat Simple_repeat 2 65 0 1 1272 3754 176 27 21 chr13 90105243 90105953 -30178359 + RMER13B LTR ERVK 1 714 -194 1 1272 1771 150 118 64 chr13 90105966 90106372 -30177940 - RLTR23 LTR ERV1 -2 428 1 1 1272 1528 354 39 16 chr13 90106498 90107247 -30177065 - Lx8 LINE L1 -247 7226 6461 1 1272 245 239 0 0 chr13 90107249 90107295 -30177017 - MT2B LTR ERVL -359 242 197 1 1272 243 280 0 0 chr13 90107251 90107301 -30177011 - B1_Mus2 SINE Alu -64 83 34 1 1272 27 29 0 0 chr13 90107372 90107406 -30176906 + AT_rich Low_complexity Low_complexity 1 34 0 1 1272 410 291 42 12 chr13 90107517 90107684 -30176628 - MER2 DNA MER2_type -31 314 143 1 1272 567 114 0 45 chr13 90108827 90108937 -30175375 + Lx LINE L1 6548 6652 -2 1 1272 212 241 0 49 chr13 90108945 90109006 -30175306 - ID SINE ID -152 72 15 1 1272 285 269 120 70 chr13 90109428 90109628 -30174684 - MER33 DNA MER1_type -108 216 7 1 1272 424 306 44 75 chr13 90109968 90110127 -30174185 + RSINE1 SINE B4 12 165 0 1 1272 5764 122 12 16 chr13 90110287 90111200 -30173112 - L1_Mus4 LINE L1 -5 6631 5723 1 1272 4295 106 37 22 chr13 90111183 90112273 -30172039 - L1VL4 LINE L1 -2240 1319 212 1 1272 347 305 46 142 chr13 90112315 90112533 -30171779 + MLT1C LTR MaLR 194 467 0 1 1272 9815 3 0 3 chr13 90112992 90114789 -30169523 - L1Md_A LINE L1 0 6582 4792 1 1272 262 367 12 12 chr13 90114880 90115040 -30169272 + Lx8 LINE L1 7014 7173 -300 1 1272 2642 110 142 0 chr13 90115465 90115893 -30168419 - MT2B2 LTR ERVL -95 489 1 1 1272 420 324 49 78 chr13 90116225 90116429 -30167883 + B3A SINE B2 1 198 0 1 1272 263 304 93 24 chr13 90116436 90116769 -30167543 - L1M4b LINE L1 -592 6447 6089 1 1272 496 336 93 86 chr13 90116878 90117175 -30167137 - L1M4b LINE L1 -1132 5874 5563 1 1272 4285 135 28 21 chr13 90117175 90117901 -30166411 - Lx2B LINE L1 -18 6982 6252 1 1272 496 336 93 86 chr13 90117901 90118539 -30165773 - L1M4b LINE L1 -1444 5562 4933 1 1272 260 300 117 22 chr13 90118601 90118874 -30165438 - L1M4b LINE L1 -2143 4863 4565 1 1272 317 353 32 13 chr13 90119104 90119259 -30165053 - L1M4b LINE L1 -4478 2624 2467 1 1272 420 71 0 0 chr13 90119463 90119519 -30164793 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1272 202 337 24 0 chr13 90119647 90119730 -30164582 + (TG)n Simple_repeat Simple_repeat 1 85 0 1 1272 1640 141 67 0 chr13 90119748 90120032 -30164280 - L1_Mm LINE L1 -942 4941 4639 1 1272 3967 55 11 0 chr13 90120024 90120638 -30163674 - L1Md_F2 LINE L1 -498 6084 5464 1 1272 3577 80 16 8 chr13 90120638 90121131 -30163181 + L1Md_F2 LINE L1 6086 6582 0 1 1272 647 153 0 8 chr13 90121134 90121253 -30163059 - L1_Mm LINE L1 -1228 4655 4538 1 1272 6575 101 61 19 chr13 90121252 90122885 -30161427 + L1_Mus3 LINE L1 4948 6638 0 1 1272 2588 77 8 11 chr13 90123144 90123514 -30160798 - L1Md_F2 LINE L1 -12 6570 6202 1 1272 502 251 182 41 chr13 90123720 90124110 -30160202 - L1M4b LINE L1 -5523 1811 1367 1 1272 389 257 117 100 chr13 90124654 90125004 -30159308 + Lx9 LINE L1 7196 7551 -93 1 1272 221 109 0 21 chr13 90126660 90126707 -30157605 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 1 1272 557 254 214 0 chr13 90126783 90126956 -30157356 + B3 SINE B2 1 210 -6 1 1272 241 301 54 14 chr13 90127293 90127367 -30156945 - ID4_ SINE ID -6 77 1 1 1272 337 327 55 98 chr13 90127564 90127577 -30156735 + B4A SINE B4 71 126 -166 1 1272 742 219 7 0 chr13 90127577 90127723 -30156589 + B1_Mur4 SINE Alu 4 150 0 1 1272 337 327 55 98 chr13 90127723 90127747 -30156565 + B4A SINE B4 127 245 -47 1 1272 6011 40 0 0 chr13 90128509 90129249 -30155063 + L1_Mm LINE L1 3851 4590 -1293 1 1272 429 167 0 0 chr13 90129256 90129334 -30154978 + (TA)n Simple_repeat Simple_repeat 2 79 0 1 1272 244 256 123 35 chr13 90129334 90129504 -30154808 + Lx9 LINE L1 7419 7603 -41 1 1272 214 268 8 39 chr13 90130013 90130141 -30154171 + A-rich Low_complexity Low_complexity 4 127 0 1 1272 429 81 0 0 chr13 90130412 90130474 -30153838 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1272 26 30 0 0 chr13 90130503 90130536 -30153776 + AT_rich Low_complexity Low_complexity 1 33 0 1 1272 185 0 0 39 chr13 90131790 90131816 -30152496 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1 1272 468 139 0 0 chr13 90133454 90133533 -30150779 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 1272 261 0 0 0 chr13 90134315 90134344 -30149968 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1272 282 284 0 12 chr13 90134345 90134427 -30149885 - L1_Rod LINE L1 -455 5392 5312 2 1272 6997 99 23 11 chr13 90134448 90135283 -30149029 - L1_Mus3 LINE L1 0 6638 5781 2 1272 1020 80 7 14 chr13 90135283 90135422 -30148890 + B1_Mus1 SINE Alu 1 138 -10 2 1272 352 37 0 36 chr13 90135422 90135478 -30148834 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2 1272 6997 122 11 14 chr13 90135478 90136153 -30148159 - L1_Mus3 LINE L1 -103 5780 5114 2 1272 3037 138 0 11 chr13 90136149 90136619 -30147693 - L1VL1 LINE L1 -5744 678 214 2 1272 240 116 0 0 chr13 90136641 90136666 -30147646 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 2 1272 1044 104 0 0 chr13 90136666 90136810 -30147502 + B1_Mus1 SINE Alu 3 146 -2 2 1272 240 116 0 0 chr13 90136810 90136827 -30147485 + (TAAA)n Simple_repeat Simple_repeat 4 20 0 2 1272 21 71 0 0 chr13 90139088 90139130 -30145182 + AT_rich Low_complexity Low_complexity 1 42 0 2 1272 212 216 0 19 chr13 90140691 90140743 -30143569 + A-rich Low_complexity Low_complexity 4 54 0 2 1272 218 209 0 0 chr13 90141395 90141438 -30142874 + (TCTA)n Simple_repeat Simple_repeat 1 43 0 2 1272 29 60 0 0 chr13 90141764 90141814 -30142498 + AT_rich Low_complexity Low_complexity 1 50 0 2 1272 27 0 0 0 chr13 90141968 90141995 -30142317 + AT_rich Low_complexity Low_complexity 1 27 0 2 1272 10204 100 14 0 chr13 90142439 90143960 -30140352 - MusHAL1 LINE L1 -297 2415 874 2 1272 3807 93 75 0 chr13 90143959 90144519 -30139793 + L1_Mus3 LINE L1 5607 6208 -430 2 1272 1360 89 98 0 chr13 90144519 90144733 -30139579 + L1_Mus3 LINE L1 6404 6638 0 2 1272 409 272 231 0 chr13 90144746 90144893 -30139419 - RMER1A Other Other -792 238 58 2 1272 3337 222 38 5 chr13 90144893 90145601 -30138711 + RMER1B Other Other 7 1055 -11 2 1272 28 0 0 0 chr13 90145643 90145671 -30138641 + AT_rich Low_complexity Low_complexity 1 28 0 2 1272 809 212 0 0 chr13 90145728 90145865 -30138447 + B1_Mur2 SINE Alu 13 149 0 2 1272 423 247 0 0 chr13 90145929 90146087 -30138225 + (TA)n Simple_repeat Simple_repeat 2 159 0 2 1272 275 336 16 74 chr13 90146088 90146210 -30138102 - RMER12 LTR ERVK -474 848 734 2 1272 575 297 62 5 chr13 90146735 90146945 -30137367 - MER2 DNA MER2_type 0 345 124 2 1272 334 310 43 81 chr13 90147040 90147226 -30137086 + MTEb LTR MaLR 10 188 -191 2 1272 523 271 7 43 chr13 90147976 90148115 -30136197 + B1F SINE Alu 14 147 -2 2 1272 411 38 0 0 chr13 90148472 90148525 -30135787 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1272 406 287 28 0 chr13 90149958 90150101 -30134211 + HAL1 LINE L1 1395 1541 -966 2 1272 346 261 95 38 chr13 90150225 90150408 -30133904 - MLT1A0 LTR MaLR -82 292 99 2 1272 30 0 0 0 chr13 90151470 90151500 -30132812 + AT_rich Low_complexity Low_complexity 1 30 0 2 1272 1153 48 0 27 chr13 90153432 90153571 -30130741 + B1_Mus2 SINE Alu 1 139 -8 2 1272 249 57 0 0 chr13 90153571 90153606 -30130706 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1272 580 122 16 24 chr13 90153787 90153913 -30130399 + CT-rich Low_complexity Low_complexity 2 126 0 2 1272 268 119 34 0 chr13 90154670 90154729 -30129583 + (TA)n Simple_repeat Simple_repeat 1 61 0 2 1272 1722 180 47 6 chr13 90155079 90155398 -30128914 + RMER6D LTR ERVK 1 332 -388 2 1272 597 197 139 0 chr13 90155405 90155527 -30128785 + RMER6D LTR ERVK 570 708 -12 2 1272 417 336 38 0 chr13 90157046 90157177 -30127135 + ID_B1 SINE B4 83 218 -6 2 1272 186 71 0 0 chr13 90157194 90157222 -30127090 + (TA)n Simple_repeat Simple_repeat 2 29 0 2 1272 1082 57 28 7 chr13 90157227 90157369 -30126943 + B1_Mus2 SINE Alu 3 147 0 2 1272 22 0 0 0 chr13 90158192 90158214 -30126098 + AT_rich Low_complexity Low_complexity 1 22 0 2 1272 418 319 78 30 chr13 90158904 90159172 -30125140 - MER2 DNA MER2_type -25 320 40 2 1272 1381 112 14 23 chr13 90159767 90159987 -30124325 - L1_Mur1 LINE L1 -816 5070 4853 2 1272 3600 193 65 88 chr13 90159986 90161687 -30122625 + Lx3C LINE L1 5412 6963 -13 2 1272 275 0 0 28 chr13 90161687 90161723 -30122589 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2 1272 194 0 39 0 chr13 90162191 90162217 -30122095 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1272 1681 30 0 0 chr13 90162823 90163024 -30121288 - L1Md_F2 LINE L1 -12 6570 6370 2 1272 305 301 87 0 chr13 90163075 90163178 -30121134 + MER44D DNA MER2_type 1 112 -593 2 1272 216 182 0 0 chr13 90163396 90163440 -30120872 + A-rich Low_complexity Low_complexity 1 44 0 2 1272 433 329 28 14 chr13 90163521 90163663 -30120649 + MLT1E LTR MaLR 2 145 -508 2 1272 377 314 19 19 chr13 90163781 90163943 -30120369 + L1MA4 LINE L1 5462 5623 -257 2 1272 3139 152 102 2 chr13 90163945 90164487 -30119825 + MT2B LTR ERVL 1 596 -5 2 1272 801 262 13 29 chr13 90164487 90164731 -30119581 + L1MA4 LINE L1 5638 5889 -1584 2 1272 1221 179 9 0 chr13 90165068 90165292 -30119020 - URR1A DNA MER1_type 0 226 1 2 1272 21 0 0 0 chr13 90166086 90166107 -30118205 + AT_rich Low_complexity Low_complexity 1 21 0 2 1272 1770 83 0 27 chr13 90166374 90166635 -30117677 + L1Md_F2 LINE L1 6328 6581 -1 2 1272 790 240 48 19 chr13 90167665 90167873 -30116439 - B3 SINE B2 -1 215 2 2 1272 1078 90 0 7 chr13 90169012 90169158 -30115154 + B1_Mus2 SINE Alu 1 145 -2 2 1272 225 0 0 0 chr13 90169158 90169183 -30115129 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 2 1272 406 350 79 0 chr13 90169595 90169735 -30114577 - B3A SINE B2 -47 151 1 2 1272 640 248 87 43 chr13 90169890 90170097 -30114215 - B3 SINE B2 0 216 1 2 1272 225 372 11 0 chr13 90171728 90171822 -30112490 + MIR SINE MIR 125 219 -43 2 1272 434 297 110 57 chr13 90171925 90172010 -30112302 - Lx6 LINE L1 0 7460 7371 2 1272 567 62 0 0 chr13 90172010 90172090 -30112222 + (CA)n Simple_repeat Simple_repeat 2 81 0 2 1272 434 297 110 57 chr13 90172090 90172268 -30112044 - Lx6 LINE L1 -90 7370 7183 2 1272 429 20 0 0 chr13 90172460 90172510 -30111802 + (TC)n Simple_repeat Simple_repeat 1 50 0 2 1272 21 89 0 0 chr13 90173117 90173173 -30111139 + AT_rich Low_complexity Low_complexity 1 56 0 2 1272 273 252 75 52 chr13 90173523 90173657 -30110655 - B1F SINE Alu -8 141 5 2 1272 220 130 0 61 chr13 90174152 90174201 -30110111 + T-rich Low_complexity Low_complexity 2 47 0 2 1272 253 161 0 0 chr13 90174247 90174309 -30110003 + Lx9 LINE L1 7583 7644 0 2 1272 327 25 0 0 chr13 90174625 90174665 -30109647 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1272 393 335 94 38 chr13 90174710 90175104 -30109208 - HAL1 LINE L1 -1274 1233 818 2 1272 822 21 0 0 chr13 90175195 90175291 -30109021 + (TC)n Simple_repeat Simple_repeat 1 96 0 2 1272 28 0 0 0 chr13 90176745 90176773 -30107539 + AT_rich Low_complexity Low_complexity 1 28 0 2 1272 3342 48 51 0 chr13 90177009 90177213 -30107099 - RLTR10C LTR ERVK 0 436 233 2 1272 378 0 0 0 chr13 90177213 90177255 -30107057 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 1272 3342 48 51 0 chr13 90177255 90177465 -30106847 - RLTR10C LTR ERVK -204 232 2 2 1273 272 104 42 0 chr13 90178217 90178265 -30106047 + (TCTCCC)n Simple_repeat Simple_repeat 2 51 0 2 1273 211 83 39 59 chr13 90178918 90178969 -30105343 + A-rich Low_complexity Low_complexity 1 50 0 2 1273 37 62 0 0 chr13 90179122 90179187 -30105125 + AT_rich Low_complexity Low_complexity 1 65 0 2 1273 2498 208 144 63 chr13 90180140 90181839 -30102473 + L1_Mur3 LINE L1 490 2302 -3578 2 1273 1153 177 0 55 chr13 90181845 90182120 -30102192 + L1_Mur3 LINE L1 2816 3075 -2805 2 1273 479 254 9 9 chr13 90182307 90182422 -30101890 + RLTR18B LTR ERVK 1 115 -397 2 1273 35336 35 0 0 chr13 90182498 90188151 -30096161 + L1Md_T LINE L1 1 5589 -297 2 1273 8973 6 0 0 chr13 90188151 90189147 -30095165 + L1Md_T LINE L1 5590 6585 0 2 1273 3146 266 71 26 chr13 90189154 90190113 -30094199 + RLTR18-int LTR ERVK 1756 2757 -2604 2 1273 7671 218 51 17 chr13 90190129 90190471 -30093841 + RLTR18-int LTR ERVK 2815 3154 -2207 2 1273 2168 118 9 12 chr13 90190471 90190815 -30093497 - L1_Mus3 LINE L1 0 6638 6296 2 1273 7671 218 51 17 chr13 90190815 90192301 -30092011 + RLTR18-int LTR ERVK 3155 4706 -655 2 1273 2352 99 9 0 chr13 90192330 90192663 -30091649 + Lx2 LINE L1 6310 6645 -352 2 1273 1350 127 14 5 chr13 90192661 90192882 -30091430 + Lx2 LINE L1 6775 6997 0 2 1273 3520 175 55 30 chr13 90192884 90193697 -30090615 - L1_Mur3 LINE L1 -1734 4146 3313 2 1273 516 50 0 12 chr13 90193699 90193780 -30090532 - L1_Mus4 LINE L1 -5 6631 6552 2 1273 2671 95 1 3 chr13 90193782 90194182 -30090130 + Lx LINE L1 5513 5916 -738 2 1273 1736 199 190 87 chr13 90194168 90194877 -30089435 - L1_Mur3 LINE L1 -2566 3314 2533 2 1273 3679 275 53 36 chr13 90194877 90196488 -30087824 + Lx5 LINE L1 5404 7048 -2 2 1273 33 43 0 0 chr13 90196752 90196799 -30087513 + AT_rich Low_complexity Low_complexity 1 47 0 2 1273 821 371 115 22 chr13 90197187 90198063 -30086249 - Charlie24 DNA MER1_type -425 2025 1068 2 1273 247 280 56 74 chr13 90198158 90198266 -30086046 - Charlie24 DNA MER1_type -1581 869 764 2 1273 24 32 0 0 chr13 90198455 90198486 -30085826 + AT_rich Low_complexity Low_complexity 1 31 0 2 1273 454 235 0 23 chr13 90199002 90199089 -30085223 + B3A SINE B2 48 132 -66 2 1273 26 74 0 0 chr13 90199122 90199176 -30085136 + AT_rich Low_complexity Low_complexity 1 54 0 2 1273 3450 23 2 0 chr13 90199247 90199642 -30084670 - MTA_Mm LTR MaLR 0 396 1 2 1273 8872 39 9 1 chr13 90199642 90200731 -30083581 - MTA_Mm-int LTR MaLR 0 1098 1 2 1273 3520 13 2 0 chr13 90200731 90201126 -30083186 - MTA_Mm LTR MaLR 0 396 1 2 1273 253 250 0 0 chr13 90201310 90201362 -30082950 + RSINE1 SINE B4 9 60 -105 2 1273 230 238 16 0 chr13 90201389 90201452 -30082860 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1273 432 0 0 0 chr13 90202146 90202194 -30082118 + (TG)n Simple_repeat Simple_repeat 1 48 0 2 1273 1489 329 88 27 chr13 90202210 90203063 -30081249 + Lx9 LINE L1 6358 7262 -382 2 1273 719 78 0 10 chr13 90203141 90203245 -30081067 + (TA)n Simple_repeat Simple_repeat 2 104 0 2 1273 421 286 23 31 chr13 90203338 90203468 -30080844 - B4A SINE B4 -1 291 163 2 1273 270 200 0 59 chr13 90203910 90203995 -30080317 - Lx9 LINE L1 -8 7636 7557 2 1273 507 160 0 0 chr13 90204007 90204101 -30080211 + CT-rich Low_complexity Low_complexity 1 94 0 2 1273 486 185 170 7 chr13 90204106 90204253 -30080059 - Lx9 LINE L1 -171 7473 7303 2 1273 6518 85 7 1 chr13 90204355 90205240 -30079072 + L1_Mus3 LINE L1 5719 6608 -30 2 1273 282 212 57 14 chr13 90205381 90205502 -30078810 + L1_Mur3 LINE L1 5351 5510 -679 2 1273 336 311 43 22 chr13 90205619 90205757 -30078555 + L1VL4 LINE L1 197 337 -5965 2 1273 10568 131 17 34 chr13 90205740 90206320 -30077992 + Lx3C LINE L1 4094 4667 -1219 3 1273 6132 40 29 0 chr13 90206320 90207073 -30077239 - L1Md_F2 LINE L1 -12 6570 5796 3 1273 10568 131 17 34 chr13 90207073 90207733 -30076579 + Lx3C LINE L1 4668 5294 -592 3 1273 340 174 395 0 chr13 90207733 90207819 -30076493 + PB1D9 SINE Alu 1 120 0 3 1273 10568 136 18 24 chr13 90207819 90208620 -30075692 + Lx3C LINE L1 5295 6104 -872 3 1273 265 291 42 17 chr13 90211954 90212073 -30072239 - L1M5 LINE L1 -696 5477 5356 3 1273 407 354 13 52 chr13 90212838 90212993 -30071319 + RSINE1 SINE B4 4 152 -13 3 1273 550 251 41 59 chr13 90213210 90213430 -30070882 + B3 SINE B2 1 216 0 3 1273 533 15 15 0 chr13 90214807 90214873 -30069439 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1273 539 15 15 0 chr13 90214929 90214997 -30069315 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1273 253 0 54 0 chr13 90215053 90215090 -30069222 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1273 475 325 122 16 chr13 90215125 90215904 -30068408 - L1MA4 LINE L1 -378 5922 4997 3 1273 446 355 37 43 chr13 90215944 90216132 -30068180 - ID_B1 SINE B4 -36 188 2 3 1273 239 286 18 0 chr13 90216217 90216273 -30068039 + B4 SINE B4 130 186 -106 3 1273 435 19 0 0 chr13 90216517 90216569 -30067743 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1273 22 56 0 0 chr13 90216865 90216901 -30067411 + AT_rich Low_complexity Low_complexity 1 36 0 3 1273 403 376 65 40 chr13 90218248 90218525 -30065787 - B4A SINE B4 -8 284 1 3 1273 226 152 22 0 chr13 90218565 90218611 -30065701 + (TTGG)n Simple_repeat Simple_repeat 2 48 0 3 1273 180 0 0 0 chr13 90219511 90219531 -30064781 + (CAGAGA)n Simple_repeat Simple_repeat 3 22 0 3 1273 203 336 140 0 chr13 90219575 90219682 -30064630 - L2 LINE L2 -743 2676 2555 3 1273 1678 210 43 22 chr13 90219778 90220148 -30064164 + ORR1C1 LTR MaLR 1 378 0 3 1273 615 328 39 34 chr13 90220186 90220391 -30063921 + B3A SINE B2 3 208 -8 3 1273 21 36 0 0 chr13 90220420 90220448 -30063864 + AT_rich Low_complexity Low_complexity 1 28 0 3 1273 28621 150 18 44 chr13 90220734 90222371 -30061941 + L1Md_F LINE L1 367 2030 -3853 3 1273 4995 53 20 0 chr13 90222371 90223011 -30061301 + L1Md_F3 LINE L1 5931 6583 -1 3 1273 28621 109 10 4 chr13 90223011 90226579 -30057733 + L1Md_F LINE L1 2031 5622 -261 3 1273 540 126 0 0 chr13 90226581 90226668 -30057644 + L1_Mus1 LINE L1 6045 6131 -436 3 1273 739 113 0 24 chr13 90226668 90226795 -30057517 + L1_Mus1 LINE L1 6444 6567 0 3 1273 22 0 0 0 chr13 90227410 90227432 -30056880 + AT_rich Low_complexity Low_complexity 1 22 0 3 1273 1076 76 14 0 chr13 90227519 90227664 -30056648 + B1_Mus1 SINE Alu 2 148 0 3 1273 21 0 0 0 chr13 90232524 90232545 -30051767 + AT_rich Low_complexity Low_complexity 1 21 0 3 1273 1173 47 0 26 chr13 90232701 90232853 -30051459 + B1_Mus1 SINE Alu 1 148 0 3 1273 1163 102 41 51 chr13 90232867 90233063 -30051249 + B2_Mm2 SINE B2 1 194 -1 3 1273 248 256 132 49 chr13 90233345 90233489 -30050823 - MLT1H1 LTR MaLR -361 194 39 3 1273 748 92 0 0 chr13 90234238 90234347 -30049965 + B1_Mus2 SINE Alu 39 147 0 3 1273 231 309 123 32 chr13 90234375 90234414 -30049898 - CYRA11_Mm Unknown Y-chromosome -189 428 261 3 1273 604 148 200 0 chr13 90234414 90234529 -30049783 + URR1A DNA MER1_type 1 138 -88 3 1273 1075 104 37 6 chr13 90234548 90234712 -30049600 + URR1A DNA MER1_type 58 226 0 3 1273 455 239 68 51 chr13 90234712 90234744 -30049568 - CYRA11_Mm Unknown Y-chromosome -441 176 142 3 1273 188 0 74 0 chr13 90235260 90235287 -30049025 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1273 906 58 16 0 chr13 90235287 90235408 -30048904 - B1_Mus2 SINE Alu -24 123 1 3 1273 496 224 62 23 chr13 90235297 90235425 -30048887 - B4 SINE B4 -88 204 72 3 1273 454 292 26 39 chr13 90235795 90235810 -30048502 + B4 SINE B4 76 224 -66 3 1273 796 162 44 0 chr13 90235810 90235946 -30048366 + B1_Mur2 SINE Alu 7 148 -1 3 1273 588 340 78 24 chr13 90236119 90236324 -30047988 + B4A SINE B4 5 220 -72 3 1273 31 26 0 0 chr13 90236433 90236471 -30047841 + AT_rich Low_complexity Low_complexity 1 38 0 3 1273 336 48 0 0 chr13 90236632 90236674 -30047638 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1273 254 342 41 0 chr13 90237124 90237197 -30047115 + B1F2 SINE Alu 14 89 -60 3 1273 27 0 0 0 chr13 90239138 90239165 -30045147 + AT_rich Low_complexity Low_complexity 1 27 0 3 1273 200 196 21 21 chr13 90239356 90239403 -30044909 - MIR SINE MIR -69 193 147 3 1273 26 0 0 0 chr13 90239839 90239865 -30044447 + AT_rich Low_complexity Low_complexity 1 26 0 3 1273 263 393 12 0 chr13 90240961 90241045 -30043267 - RSINE1 SINE B4 -15 150 66 3 1273 243 0 0 0 chr13 90241401 90241428 -30042884 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1273 180 77 0 0 chr13 90242286 90242312 -30042000 + (TTTTTA)n Simple_repeat Simple_repeat 2 27 0 3 1273 198 71 0 0 chr13 90242344 90242372 -30041940 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1273 345 299 47 0 chr13 90243540 90243647 -30040665 + RMER30 DNA MER1_type 1 112 -90 3 1273 444 322 67 27 chr13 90243647 90243797 -30040515 + RSINE1 SINE B4 8 163 -2 3 1273 22 0 0 0 chr13 90246331 90246353 -30037959 + AT_rich Low_complexity Low_complexity 1 22 0 3 1273 23 0 0 0 chr13 90246720 90246743 -30037569 + AT_rich Low_complexity Low_complexity 1 23 0 3 1273 1401 190 106 59 chr13 90248164 90248829 -30035483 - RLTR13B1 LTR ERVK 0 893 1 3 1273 320 352 309 7 chr13 90250750 90251011 -30033301 - MLT2F LTR ERVL -305 358 19 3 1273 3659 120 57 31 chr13 90252164 90252781 -30031531 - Lx2 LINE L1 -21 6976 6344 3 1273 1133 122 22 16 chr13 90254268 90254452 -30029860 - B2_Mm2 SINE B2 -9 186 2 3 1273 242 95 0 23 chr13 90254535 90254578 -30029734 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 3 1273 630 294 12 132 chr13 90254792 90254862 -30029450 - B3 SINE B2 -1 215 151 3 1273 528 84 0 0 chr13 90254862 90254945 -30029367 + (TG)n Simple_repeat Simple_repeat 1 83 0 3 1273 663 238 0 122 chr13 90254945 90255117 -30029195 - B3A SINE B2 -46 152 2 3 1273 198 0 0 0 chr13 90255855 90255877 -30028435 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1273 1058 91 7 0 chr13 90258326 90258469 -30025843 + B1_Mus1 SINE Alu 5 148 0 3 1273 191 266 34 157 chr13 90259941 90260088 -30024224 - MIRc SINE MIR -115 153 25 3 1273 242 167 0 23 chr13 90260228 90260271 -30024041 - MLT1A1 LTR MaLR -1 407 366 3 1273 1551 210 44 74 chr13 90260303 90260660 -30023652 - Lx7 LINE L1 0 7696 7354 3 1273 851 0 10 0 chr13 90260660 90260759 -30023553 + (GA)n Simple_repeat Simple_repeat 1 100 0 3 1273 1551 210 44 74 chr13 90260759 90260833 -30023479 - Lx7 LINE L1 -343 7353 7278 3 1273 229 228 18 0 chr13 90260852 90260909 -30023403 + L1_Mur3 LINE L1 572 629 -7099 3 1273 2616 123 48 29 chr13 90260909 90261393 -30022919 - RMER17A2 LTR ERVK -413 493 1 3 1273 259 117 0 18 chr13 90261395 90261444 -30022868 + L1_Mur3 LINE L1 1143 1180 -6548 3 1273 2097 174 48 4 chr13 90261448 90261905 -30022407 + L1_Mur3 LINE L1 1546 2022 -3858 3 1273 2402 84 29 11 chr13 90262233 90262496 -30021816 - L1_Mus3 LINE L1 0 6638 6369 3 1273 294 98 0 0 chr13 90262496 90262547 -30021765 + (ATTG)n Simple_repeat Simple_repeat 1 51 0 3 1273 2402 84 29 11 chr13 90262547 90262634 -30021678 - L1_Mus3 LINE L1 -270 6368 6282 3 1273 194 243 0 28 chr13 90262850 90262922 -30021390 + CT-rich Low_complexity Low_complexity 6 75 0 3 1273 189 0 0 0 chr13 90262992 90263013 -30021299 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1273 411 187 0 0 chr13 90263020 90263111 -30021201 - L1_Mur3 LINE L1 -2132 3748 3658 3 1273 365 247 52 0 chr13 90263125 90263222 -30021090 - Lx9 LINE L1 -177 7467 7366 3 1273 22743 119 8 4 chr13 90263212 90267175 -30017137 - L1_Mus3 LINE L1 -361 6277 2296 3 1273 7474 60 25 0 chr13 90267167 90268293 -30016019 + L1_Mus1 LINE L1 5416 6567 0 3 1273 243 0 0 0 chr13 90268308 90268335 -30015977 - MusHAL1 LINE L1 -1606 1106 1080 3 1273 3942 164 8 34 chr13 90268336 90269085 -30015227 + L1VL1 LINE L1 311 1019 -5522 3 1273 196 342 14 0 chr13 90269581 90269654 -30014658 - MIR SINE MIR -73 189 116 3 1273 496 71 124 0 chr13 90269687 90269708 -30014604 + polypurine Low_complexity Low_complexity 5 27 0 3 1273 1274 33 0 43 chr13 90269708 90269896 -30014416 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 3 1273 496 71 124 0 chr13 90269896 90269987 -30014325 + GA-rich Low_complexity Low_complexity 28 130 0 3 1273 841 181 6 6 chr13 90269977 90270081 -30014231 + polypurine Low_complexity Low_complexity 2 105 0 3 1273 1105 55 0 20 chr13 90270081 90270229 -30014083 + B1_Mus1 SINE Alu 4 148 0 3 1273 841 181 6 6 chr13 90270229 90270302 -30014010 + polypurine Low_complexity Low_complexity 106 179 0 3 1273 1305 83 0 0 chr13 90270326 90270506 -30013806 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 3 1273 264 254 45 0 chr13 90271012 90271079 -30013233 + MER46C DNA MER2_type 268 337 -1 3 1273 776 172 35 0 chr13 90272208 90272353 -30011959 + URR1B DNA MER1_type 73 222 -3 3 1273 1589 78 77 15 chr13 90272547 90272806 -30011506 - RLTR10A LTR ERVK 0 411 137 3 1273 192 179 0 0 chr13 90273548 90273587 -30010725 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1273 260 221 59 0 chr13 90273903 90273971 -30010341 - Lx8 LINE L1 -1 7472 7401 3 1273 4661 192 144 6 chr13 90274541 90275591 -30008721 - Lx9 LINE L1 -2 7642 6448 3 1273 3075 229 32 16 chr13 90277448 90278139 -30006173 - Lx7 LINE L1 -417 7279 6578 3 1273 189 0 0 0 chr13 90278584 90278605 -30005707 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 3 1273 5479 83 4 3 chr13 90279809 90280931 -30003381 - L1VL4 LINE L1 -2220 1339 216 3 1273 31 0 0 0 chr13 90283367 90283398 -30000914 + AT_rich Low_complexity Low_complexity 1 31 0 3 1273 456 19 0 0 chr13 90284122 90284175 -30000137 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1273 205 259 0 18 chr13 90284183 90284238 -30000074 + CT-rich Low_complexity Low_complexity 1 54 0 3 1273 1847 102 4 14 chr13 90284529 90284809 -29999503 - Lx3_Mus LINE L1 -589 6420 6144 3 1273 4145 101 18 12 chr13 90284809 90285413 -29998899 + Lx3_Mus LINE L1 6402 7009 0 3 1273 25 0 0 0 chr13 90285448 90285473 -29998839 + AT_rich Low_complexity Low_complexity 1 25 0 3 1273 375 337 65 51 chr13 90285680 90286033 -29998279 - Lx8 LINE L1 -22 7451 7094 3 1273 429 258 129 0 chr13 90286118 90286242 -29998070 - L1_Rod LINE L1 -908 4939 4800 4 1273 719 266 10 33 chr13 90286314 90286572 -29997740 - L1_Mur3 LINE L1 -1287 4856 4606 4 1273 366 243 0 9 chr13 90286729 90286837 -29997475 + Lx9 LINE L1 7532 7638 -6 4 1273 184 222 36 36 chr13 90287001 90287057 -29997255 - L3 LINE CR1 -304 4185 4130 4 1273 252 0 0 0 chr13 90288128 90288156 -29996156 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1273 920 94 2 9 chr13 90288239 90288390 -29995922 + B2_Mm2 SINE B2 6 156 -37 4 1273 408 55 0 0 chr13 90288390 90288445 -29995867 + (TAAA)n Simple_repeat Simple_repeat 4 58 0 4 1273 757 204 149 25 chr13 90288636 90288837 -29995475 + URR1A DNA MER1_type 1 226 0 4 1273 887 315 45 15 chr13 90288931 90289212 -29995100 + ORR1E LTR MaLR 3 286 -88 4 1273 2750 155 13 7 chr13 90289225 90289687 -29994625 - RLTR20B1 LTR ERVK -95 468 4 4 1273 281 293 0 68 chr13 90289688 90289713 -29994599 + ORR1E LTR MaLR 272 296 -83 4 1273 3925 50 0 32 chr13 90289713 90290211 -29994101 - LTRIS_Mm LTR ERV1 0 482 1 4 1273 281 293 0 68 chr13 90290211 90290273 -29994039 + ORR1E LTR MaLR 297 353 -26 4 1273 531 0 0 0 chr13 90292398 90292457 -29991855 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 1273 7292 82 6 6 chr13 90293328 90294969 -29989343 + L1_Mus1 LINE L1 4931 6567 0 4 1273 205 321 66 74 chr13 90297553 90297674 -29986638 - MIRb SINE MIR -115 153 34 4 1273 790 313 66 13 chr13 90298280 90298581 -29985731 + Lx8 LINE L1 7156 7472 -1 4 1273 1203 215 31 0 chr13 90298596 90298852 -29985460 - Lx9 LINE L1 -304 7340 7077 4 1273 538 200 18 0 chr13 90298855 90298965 -29985347 + Lx9 LINE L1 7362 7473 -171 4 1273 471 35 0 0 chr13 90298967 90299024 -29985288 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1273 1506 239 9 18 chr13 90299082 90299414 -29984898 - Lx5 LINE L1 -5 7045 6717 4 1273 402 198 59 0 chr13 90299421 90299522 -29984790 + Lx9 LINE L1 7537 7643 -1 4 1273 422 133 112 0 chr13 90299547 90299645 -29984667 + L1Md_F2 LINE L1 6471 6579 -3 4 1273 1753 201 86 39 chr13 90301716 90302124 -29982188 - RMER15 LTR ERVL 0 575 149 4 1273 22 0 0 0 chr13 90302145 90302167 -29982145 + AT_rich Low_complexity Low_complexity 1 22 0 4 1273 180 196 0 150 chr13 90302275 90302335 -29981977 - L2b LINE L2 -54 3321 3271 4 1273 977 127 12 0 chr13 90302630 90302795 -29981517 + (TTTC)n Simple_repeat Simple_repeat 1 167 0 4 1273 1106 52 0 0 chr13 90302796 90302930 -29981382 - B1_Mm SINE Alu -13 134 1 4 1273 629 282 0 0 chr13 90306541 90306683 -29977629 - B1F1 SINE Alu -7 142 1 4 1273 1882 115 48 3 chr13 90306684 90306997 -29977315 + RMER17D2 LTR ERVK 483 809 0 4 1273 411 243 17 0 chr13 90308223 90308396 -29975916 + (TA)n Simple_repeat Simple_repeat 2 177 0 4 1274 24 0 0 0 chr13 90308751 90308775 -29975537 + AT_rich Low_complexity Low_complexity 1 24 0 4 1274 256 369 7 7 chr13 90308780 90308922 -29975390 + (TG)n Simple_repeat Simple_repeat 1 142 0 4 1274 272 368 10 21 chr13 90308962 90309059 -29975253 - B4 SINE B4 -124 168 73 4 1274 200 333 38 13 chr13 90310016 90310095 -29974217 - MIR3 SINE MIR -1 207 127 4 1274 248 310 8 42 chr13 90310136 90310254 -29974058 + MIRc SINE MIR 17 130 -138 4 1274 626 103 17 25 chr13 90310743 90310863 -29973449 + (GAAAA)n Simple_repeat Simple_repeat 1 119 0 4 1274 300 254 143 0 chr13 90311723 90311849 -29972463 + B1F SINE Alu 5 148 -1 4 1274 543 264 103 38 chr13 90311927 90312112 -29972200 + B3A SINE B2 1 197 -1 4 1274 28 48 0 0 chr13 90312222 90312264 -29972048 + AT_rich Low_complexity Low_complexity 1 42 0 4 1274 22 0 0 0 chr13 90312283 90312305 -29972007 + AT_rich Low_complexity Low_complexity 1 22 0 4 1274 195 114 0 0 chr13 90313197 90313232 -29971080 + (TCTG)n Simple_repeat Simple_repeat 4 38 0 4 1274 829 288 81 42 chr13 90313232 90313493 -29970819 - B4A SINE B4 -21 271 1 4 1274 5923 40 0 0 chr13 90313599 90314306 -29970006 - L1Md_T LINE L1 0 6582 5876 4 1274 3216 56 10 0 chr13 90314341 90314752 -29969560 - L1Md_F2 LINE L1 -441 6141 5727 4 1274 2902 75 82 0 chr13 90314752 90315154 -29969158 + L1_Mus1 LINE L1 6127 6561 -6 4 1274 1366 180 3 48 chr13 90315388 90315698 -29968614 + RMER10B LTR ERVL 1 296 -102 4 1274 26 23 0 23 chr13 90315837 90315865 -29968447 + AT_rich Low_complexity Low_complexity 1 28 0 4 1274 3906 72 2 25 chr13 90315865 90316396 -29967916 - L1_Mus1 LINE L1 -1 6566 6048 4 1274 26 23 0 23 chr13 90316396 90316411 -29967901 + AT_rich Low_complexity Low_complexity 1 15 0 4 1274 991 104 7 0 chr13 90316600 90316744 -29967568 - URR1A DNA MER1_type 0 226 82 4 1274 848 224 127 5 chr13 90316764 90316984 -29967328 + ORR1D2 LTR MaLR 124 370 0 4 1274 23 54 0 0 chr13 90317041 90317078 -29967234 + AT_rich Low_complexity Low_complexity 1 37 0 4 1274 406 194 21 69 chr13 90317090 90317278 -29967034 + (TATAA)n Simple_repeat Simple_repeat 2 180 0 4 1274 258 216 64 64 chr13 90318125 90318219 -29966093 - LTR85a LTR Gypsy? -598 104 11 4 1274 225 270 108 139 chr13 90318499 90318628 -29965684 - RSINE1 SINE B4 0 165 41 4 1274 204 40 0 0 chr13 90318784 90318809 -29965503 + (TA)n Simple_repeat Simple_repeat 2 26 0 4 1274 955 29 0 126 chr13 90318817 90318976 -29965336 - B1_Mus2 SINE Alu 0 147 9 4 1274 419 301 78 22 chr13 90319827 90320007 -29964305 - MIR SINE MIR 0 262 73 4 1274 23 0 0 0 chr13 90320696 90320719 -29963593 + AT_rich Low_complexity Low_complexity 1 23 0 4 1274 251 307 194 32 chr13 90320858 90321013 -29963299 + MLT1K LTR MaLR 298 477 -118 4 1274 366 301 9 26 chr13 90321217 90321333 -29962979 + PB1D10 SINE Alu 1 114 -3 4 1274 492 18 0 0 chr13 90321903 90321960 -29962352 + (TCCC)n Simple_repeat Simple_repeat 3 59 0 4 1274 21 36 0 0 chr13 90322913 90322941 -29961371 + AT_rich Low_complexity Low_complexity 1 28 0 4 1274 931 172 69 0 chr13 90324151 90324325 -29959987 + B2_Mm2 SINE B2 1 186 -9 4 1274 272 304 64 58 chr13 90324488 90324659 -29959653 + MamRep38 DNA hAT 5 176 -119 4 1274 180 0 0 0 chr13 90325031 90325051 -29959261 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1274 22 35 0 0 chr13 90325060 90325089 -29959223 + AT_rich Low_complexity Low_complexity 1 29 0 4 1274 612 278 62 0 chr13 90325104 90325248 -29959064 - RSINE1 SINE B4 -10 155 3 4 1274 667 319 0 6 chr13 90325899 90326079 -29958233 + B3A SINE B2 1 179 -19 4 1274 23 54 0 0 chr13 90326228 90326265 -29958047 + AT_rich Low_complexity Low_complexity 1 37 0 4 1274 471 297 26 52 chr13 90328569 90328761 -29955551 + MER5A DNA MER1_type 3 189 0 4 1274 644 309 6 6 chr13 90330813 90330995 -29953317 + Lx8 LINE L1 6820 7001 -472 4 1274 1175 86 0 98 chr13 90332285 90332490 -29951822 + B2_Mm2 SINE B2 3 187 -8 4 1274 182 274 48 0 chr13 90332628 90332690 -29951622 - MIR SINE MIR -44 218 154 4 1274 574 159 53 5 chr13 90332691 90332800 -29951512 - B2_Mm2 SINE B2 -79 114 4 4 1274 541 322 182 11 chr13 90332825 90333354 -29950958 + L1M2 LINE L1 4118 4736 -1407 4 1274 1064 170 19 43 chr13 90333388 90333646 -29950666 + Lx7 LINE L1 7445 7696 0 4 1274 181 57 0 54 chr13 90333646 90333683 -29950629 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1274 349 221 61 0 chr13 90333693 90333812 -29950500 + L1_Mm LINE L1 4700 4830 -1053 4 1274 8277 138 38 31 chr13 90333807 90334754 -29949558 - Lx2B LINE L1 -3 6997 6046 4 1274 576 0 0 0 chr13 90334754 90334818 -29949494 + (TC)n Simple_repeat Simple_repeat 2 65 0 4 1274 8277 162 32 15 chr13 90334818 90336149 -29948163 - Lx2B LINE L1 -955 6045 4685 4 1274 1580 153 22 120 chr13 90336163 90336571 -29947741 - RLTR9A LTR ERVK 0 368 1 4 1274 284 185 0 36 chr13 90336590 90336646 -29947666 - ETnERV2-int LTR ERVK -22 7384 7331 4 1274 572 242 81 175 chr13 90336859 90337219 -29947093 - ETnERV2-int LTR ERVK -984 6422 6097 4 1274 2751 139 14 18 chr13 90337227 90337673 -29946639 - ETnERV2-int LTR ERVK -1230 4176 3733 4 1274 2535 53 24 0 chr13 90337673 90338011 -29946301 + MTA_Mm LTR MaLR 1 346 -50 4 1274 14909 157 44 47 chr13 90338017 90340225 -29944087 - ETnERV2-int LTR ERVK -3312 4094 1566 4 1274 938 7 0 62 chr13 90340225 90340386 -29943926 + (TTCC)n Simple_repeat Simple_repeat 3 153 0 4 1274 14909 155 39 52 chr13 90340386 90340407 -29943905 - ETnERV2-int LTR ERVK -4995 2411 2393 4 1274 1169 69 0 0 chr13 90340407 90340552 -29943760 - B1_Mus1 SINE Alu -3 145 1 4 1274 14909 155 39 52 chr13 90340552 90340835 -29943477 - ETnERV2-int LTR ERVK -5014 2392 2145 4 1274 1437 39 44 0 chr13 90340835 90341017 -29943295 + B2_Mm1a SINE B2 2 191 -2 4 1274 14909 155 39 52 chr13 90341017 90342096 -29942216 - ETnERV2-int LTR ERVK -5262 2144 1067 4 1274 216 164 36 18 chr13 90342108 90342164 -29942148 + (CATTT)n Simple_repeat Simple_repeat 3 59 0 4 1274 705 106 0 0 chr13 90342166 90342270 -29942042 + (TTCTC)n Simple_repeat Simple_repeat 2 105 0 4 1274 1870 141 13 76 chr13 90342592 90342985 -29941327 - RLTR9A LTR ERVK 0 368 1 4 1274 11086 147 9 5 chr13 90342987 90344943 -29939369 - L1_Mur1 LINE L1 -844 5042 3078 4 1274 222 240 31 0 chr13 90345638 90345769 -29938543 + GA-rich Low_complexity Low_complexity 1 135 0 4 1274 195 42 0 0 chr13 90345769 90345793 -29938519 + (GGGA)n Simple_repeat Simple_repeat 1 24 0 4 1274 564 15 0 0 chr13 90346706 90346771 -29937541 + (TC)n Simple_repeat Simple_repeat 2 66 0 4 1274 489 17 0 0 chr13 90346771 90346828 -29937484 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1274 306 0 0 0 chr13 90347193 90347227 -29937085 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1274 492 62 0 0 chr13 90348631 90348695 -29935617 + (TA)n Simple_repeat Simple_repeat 2 65 0 4 1274 967 280 110 30 chr13 90348894 90349229 -29935083 + MLT1B LTR MaLR 13 374 -16 4 1274 725 228 30 49 chr13 90350980 90351027 -29933285 + Lx6 LINE L1 7085 7134 -326 4 1274 182 33 0 62 chr13 90351027 90351059 -29933253 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 4 1274 619 174 124 0 chr13 90351060 90351181 -29933131 - B1_Mur4 SINE Alu -13 137 2 4 1274 725 228 30 49 chr13 90351181 90351334 -29932978 + Lx6 LINE L1 7135 7283 -177 4 1274 423 0 0 0 chr13 90351558 90351605 -29932707 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1274 390 289 67 34 chr13 90352484 90352663 -29931649 - L1MC1 LINE L1 -6 6327 6143 4 1274 483 285 138 27 chr13 90354071 90354331 -29929981 - L1MC1 LINE L1 -290 6043 5755 4 1274 650 164 49 8 chr13 90354474 90354597 -29929715 + Lx9 LINE L1 7295 7422 -222 5 1274 509 311 85 12 chr13 90354618 90354865 -29929447 - L1MC1 LINE L1 -668 5665 5401 4 1274 329 305 40 0 chr13 90355120 90355271 -29929041 - L1MC1 LINE L1 -775 5371 5215 4 1274 1278 85 0 0 chr13 90355293 90355470 -29928842 + (TTCTC)n Simple_repeat Simple_repeat 1 177 0 5 1274 332 136 30 0 chr13 90355470 90355531 -29928781 + CT-rich Low_complexity Low_complexity 9 71 0 5 1274 675 94 0 0 chr13 90355542 90355638 -29928674 + (TTCC)n Simple_repeat Simple_repeat 4 99 0 5 1274 681 167 8 0 chr13 90355639 90355759 -29928553 - B1_Mus1 SINE Alu 0 148 28 5 1274 2037 128 13 7 chr13 90355759 90356066 -29928246 + RLTR27 LTR ERVK 1 309 0 5 1274 310 89 37 0 chr13 90356090 90356144 -29928168 + MMERVK10C-int LTR ERVK 162 267 -7314 5 1274 672 255 53 0 chr13 90356176 90356364 -29927948 + MMERVK10C-int LTR ERVK 655 852 -1135 5 1274 213 266 0 45 chr13 90356370 90356437 -29927875 + GA-rich Low_complexity Low_complexity 2 65 0 5 1274 309 264 120 19 chr13 90356472 90356580 -29927732 + MMERVK10C-int LTR ERVK 797 915 -6765 5 1274 7339 310 32 41 chr13 90356758 90361109 -29923203 + MMERVK10C-int LTR ERVK 1166 5476 -2105 5 1274 296 273 0 0 chr13 90361415 90361492 -29922820 + MMERVK10C-int LTR ERVK 6993 7069 -512 5 1274 1522 142 4 26 chr13 90361626 90361893 -29922419 + MMERVK10C-int LTR ERVK 7321 7581 0 5 1274 2098 108 13 13 chr13 90361893 90362202 -29922110 + RLTR27 LTR ERVK 1 309 0 5 1274 913 282 13 93 chr13 90362345 90362646 -29921666 - B4A SINE B4 0 292 16 5 1274 290 230 57 11 chr13 90362647 90362735 -29921577 - L1MC1 LINE L1 -983 5163 5072 4 1274 28 79 0 0 chr13 90363325 90363388 -29920924 + AT_rich Low_complexity Low_complexity 1 63 0 5 1274 1241 306 16 16 chr13 90363827 90363844 -29920468 - L1MA4A LINE L1 -339 5964 5949 5 1274 528 16 0 0 chr13 90363844 90363905 -29920407 + (CA)n Simple_repeat Simple_repeat 2 62 0 5 1274 1241 306 16 16 chr13 90363905 90364378 -29919934 - L1MA4A LINE L1 -355 5948 5474 5 1274 496 238 55 47 chr13 90364408 90364536 -29919776 + Lx7 LINE L1 6474 6602 -1094 5 1274 531 78 0 0 chr13 90364611 90364688 -29919624 + (TG)n Simple_repeat Simple_repeat 2 78 0 5 1274 2797 105 5 5 chr13 90364870 90365290 -29919022 - BGLII LTR ERVK 0 421 2 5 1274 1188 229 79 52 chr13 90365743 90366111 -29918201 - ORR1C1 LTR MaLR 0 378 1 5 1274 180 77 0 0 chr13 90366313 90366339 -29917973 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 5 1274 719 103 37 0 chr13 90366571 90366678 -29917634 + RMER6A LTR ERVK 1 111 -579 5 1274 686 151 95 101 chr13 90366653 90366822 -29917490 + MT2B LTR ERVL 171 338 -263 5 1274 1850 138 11 40 chr13 90366770 90367117 -29917195 + RMER6A LTR ERVK 138 474 -282 5 1274 387 0 0 0 chr13 90367143 90367186 -29917126 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1274 292 308 134 8 chr13 90367215 90367349 -29916963 + MLT1A0 LTR MaLR 1 151 -214 5 1274 263 226 16 16 chr13 90367411 90367474 -29916838 - RMER6A LTR ERVK 0 756 694 5 1274 325 304 35 26 chr13 90367703 90367818 -29916494 + PB1D7 SINE Alu 3 118 -2 5 1274 205 208 25 25 chr13 90367923 90368002 -29916310 + (TTAAA)n Simple_repeat Simple_repeat 3 81 0 5 1274 272 210 15 61 chr13 90368067 90368133 -29916179 + MLT1D LTR MaLR 12 74 -431 5 1274 373 202 11 35 chr13 90368136 90368223 -29916089 + MT2A LTR ERVL 7 91 -442 5 1274 270 204 0 36 chr13 90368238 90368294 -29916018 - MT2A LTR ERVL -452 81 28 5 1274 729 218 38 6 chr13 90368283 90368440 -29915872 - MTC LTR MaLR -251 170 9 5 1274 480 62 0 0 chr13 90368457 90368521 -29915791 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1274 275 152 0 0 chr13 90368521 90368567 -29915745 + MT2A LTR ERVL 486 531 -2 5 1274 857 299 136 50 chr13 90368581 90368964 -29915348 + MLT1D LTR MaLR 90 505 0 5 1274 514 289 65 20 chr13 90371010 90371211 -29913101 + L3b LINE CR1 188 397 -85 5 1274 283 335 64 0 chr13 90371377 90371550 -29912762 - L1MB3 LINE L1 -54 6129 5946 5 1274 639 361 32 72 chr13 90371957 90372303 -29912009 - ORR1E LTR MaLR -6 353 22 5 1274 1205 48 0 0 chr13 90372323 90372470 -29911842 + B1_Mus2 SINE Alu 1 147 0 5 1274 48 81 0 0 chr13 90372614 90372725 -29911587 + AT_rich Low_complexity Low_complexity 1 111 0 5 1274 4413 114 23 22 chr13 90373055 90374271 -29910041 + RLTR13D3 LTR ERVK 1 1114 0 5 1274 894 335 76 36 chr13 90375121 90375962 -29908350 - Lx8 LINE L1 -725 6748 6032 5 1274 511 325 33 28 chr13 90375972 90376187 -29908125 + Lx8 LINE L1 6726 6941 -532 5 1274 225 361 61 20 chr13 90376530 90376677 -29907635 + MIR SINE MIR 110 262 0 5 1274 393 22 0 0 chr13 90377927 90377973 -29906339 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1274 492 340 64 72 chr13 90379027 90379417 -29904895 - MLT2B3 LTR ERVL -10 544 158 5 1274 292 400 30 12 chr13 90379318 90379485 -29904827 - MTEb LTR MaLR -151 228 59 5 1274 489 320 19 38 chr13 90379535 90379694 -29904618 + MER2B DNA MER2_type 180 335 -1 5 1274 180 354 54 27 chr13 90380442 90380628 -29903684 - L2 LINE L2 -954 2465 2275 5 1274 897 44 0 0 chr13 90380632 90380746 -29903566 + (GAA)n Simple_repeat Simple_repeat 1 114 0 5 1274 1452 207 48 81 chr13 90380866 90381053 -29903259 + ORR1C2 LTR MaLR 1 167 -217 5 1274 659 95 9 0 chr13 90381053 90381158 -29903154 + (TCTA)n Simple_repeat Simple_repeat 2 107 0 5 1274 595 43 21 21 chr13 90381163 90381258 -29903054 + (TCTCTG)n Simple_repeat Simple_repeat 2 96 0 5 1274 1452 207 48 81 chr13 90381258 90381459 -29902853 + ORR1C2 LTR MaLR 176 381 -3 5 1274 4543 246 62 26 chr13 90381461 90381887 -29902425 + ORR1C2-int LTR MaLR 1 472 -898 5 1274 315 0 0 0 chr13 90381887 90381922 -29902390 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1274 4543 246 62 26 chr13 90381922 90382817 -29901495 + ORR1C2-int LTR MaLR 473 1369 -1 5 1274 306 306 50 80 chr13 90382818 90383017 -29901295 + ORR1C2 LTR MaLR 1 193 -185 5 1274 24390 129 18 11 chr13 90383210 90385389 -29898923 - L1_Mus4 LINE L1 -14 6622 4494 5 1274 5488 118 38 10 chr13 90385389 90386267 -29898045 - RLTR13D6 LTR ERVK 0 902 1 5 1274 24390 162 29 20 chr13 90386267 90390163 -29894149 - L1_Mus4 LINE L1 -1390 4493 511 5 1274 412 276 74 55 chr13 90390822 90391068 -29893244 + MTEa LTR MaLR 114 379 0 5 1274 375 264 0 11 chr13 90394037 90394125 -29890187 + MLT2C2 LTR ERVL 3 89 -375 5 1274 264 329 128 70 chr13 90394126 90394741 -29889571 + Lx8 LINE L1 6813 7463 -10 5 1274 243 324 65 58 chr13 90395067 90395221 -29889091 + MLT1E1A LTR MaLR 3 157 -523 5 1274 3175 200 100 23 chr13 90395161 90395903 -29888409 - RLTR40 LTR ERVK -13 804 6 5 1274 789 31 0 0 chr13 90396058 90396154 -29888158 + (TG)n Simple_repeat Simple_repeat 2 97 0 5 1274 27 0 0 0 chr13 90396231 90396258 -29888054 + AT_rich Low_complexity Low_complexity 1 27 0 5 1274 835 234 121 24 chr13 90396258 90396556 -29887756 + Lx3C LINE L1 6650 6976 0 5 1274 936 123 0 0 chr13 90397038 90397184 -29887128 + (CAG)n Simple_repeat Simple_repeat 1 146 0 5 1274 954 134 207 0 chr13 90397739 90397918 -29886394 + B3 SINE B2 1 216 0 5 1274 1328 157 31 241 chr13 90399512 90399998 -29884314 - ORR1C2 LTR MaLR 0 384 1 5 1274 2706 120 2 0 chr13 90401349 90401907 -29882405 - Lx LINE L1 -683 5971 5413 5 1274 4932 162 2 2 chr13 90401919 90402824 -29881488 + L1_Mm LINE L1 4399 5303 -580 5 1274 694 313 7 31 chr13 90403196 90403397 -29880915 - B3 SINE B2 -5 190 6 5 1274 252 0 0 0 chr13 90403643 90403671 -29880641 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1274 440 359 124 3 chr13 90404405 90404704 -29879608 - L2 LINE L2 -507 2912 2578 5 1274 238 350 167 7 chr13 90404704 90404716 -29879596 + B4A SINE B4 82 125 -167 5 1274 476 262 0 0 chr13 90404716 90404819 -29879493 + PB1D9 SINE Alu 10 112 -8 5 1274 238 350 167 7 chr13 90404819 90404848 -29879464 + B4A SINE B4 126 248 -44 5 1274 353 267 279 16 chr13 90404915 90405098 -29879214 + HAL1-3A_ME LINE L1 1968 2198 -660 5 1274 248 288 124 0 chr13 90405098 90405251 -29879061 - L2 LINE L2 -826 2593 2422 5 1274 568 245 120 21 chr13 90407801 90407993 -29876319 + B3 SINE B2 2 212 -4 5 1274 1135 246 40 0 chr13 90408192 90408464 -29875848 + Lx7 LINE L1 6991 7273 -423 5 1274 297 224 19 81 chr13 90408474 90408573 -29875739 + T-rich Low_complexity Low_complexity 55 151 0 5 1274 342 127 0 0 chr13 90408573 90408644 -29875668 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1274 297 224 19 81 chr13 90408644 90408704 -29875608 + T-rich Low_complexity Low_complexity 2 54 0 5 1274 31 82 0 0 chr13 90408784 90408857 -29875455 + AT_rich Low_complexity Low_complexity 1 73 0 5 1274 269 261 14 14 chr13 90409482 90409552 -29874760 - ID4_ SINE ID -3 80 11 5 1274 30 45 0 0 chr13 90409933 90409977 -29874335 + AT_rich Low_complexity Low_complexity 1 44 0 5 1274 695 62 10 0 chr13 90411147 90411244 -29873068 + (TTTC)n Simple_repeat Simple_repeat 3 100 0 5 1274 228 296 78 0 chr13 90411364 90411479 -29872833 + LTR37B LTR ERV1 175 298 -170 5 1274 33375 74 7 3 chr13 90411728 90417900 -29866412 - L1Md_F2 LINE L1 -3 6579 380 5 1274 24 96 0 0 chr13 90418618 90418691 -29865621 + AT_rich Low_complexity Low_complexity 1 73 0 5 1274 189 0 0 0 chr13 90419170 90419191 -29865121 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1274 508 307 58 87 chr13 90419727 90420002 -29864310 + MLT1M LTR MaLR 78 344 -328 5 1274 551 293 7 7 chr13 90420134 90420275 -29864037 + B1_Mur1 SINE Alu 1 141 -8 5 1274 25 31 0 0 chr13 90420275 90420307 -29864005 + AT_rich Low_complexity Low_complexity 1 32 0 5 1274 4781 60 0 3 chr13 90422187 90422793 -29861519 + L1Md_F2 LINE L1 5978 6581 -1 5 1274 2119 208 33 45 chr13 90423077 90423586 -29860726 - RMER19C LTR ERVK 0 611 109 5 1274 4886 51 0 30 chr13 90424828 90425451 -29858861 - L1_Mus1 LINE L1 -2 6565 5962 5 1274 2901 9 0 0 chr13 90425451 90425773 -29858539 + RLTRETN_Mm LTR ERVK 1 322 0 5 1274 39398 26 4 3 chr13 90425773 90430615 -29853697 + MMETn-int LTR ERVK 1 4844 0 5 1274 2890 12 0 0 chr13 90430615 90430937 -29853375 + RLTRETN_Mm LTR ERVK 1 322 0 5 1274 852 19 0 0 chr13 90430938 90431046 -29853266 - L1_Mus1 LINE L1 -601 5966 5859 5 1274 200 250 46 15 chr13 90431417 90431482 -29852830 - MIRc SINE MIR -141 127 61 5 1274 285 125 0 0 chr13 90432880 90432936 -29851376 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1274 368 279 72 48 chr13 90433354 90433520 -29850792 - MIRc SINE MIR -48 220 51 5 1274 1528 185 128 39 chr13 90434833 90435193 -29849119 + MTB LTR MaLR 6 397 -3 5 1274 241 296 34 25 chr13 90435240 90435358 -29848954 + MIR SINE MIR 117 235 -27 5 1274 679 296 65 0 chr13 90435399 90435585 -29848727 + B3A SINE B2 1 198 0 5 1274 243 365 96 0 chr13 90435722 90435826 -29848486 + PB1D7 SINE Alu 7 120 0 5 1274 496 169 8 8 chr13 90436013 90436144 -29848168 + (CA)n Simple_repeat Simple_repeat 2 132 0 5 1274 24 0 0 0 chr13 90436297 90436321 -29847991 + AT_rich Low_complexity Low_complexity 1 24 0 5 1274 1912 255 140 9 chr13 90436333 90436920 -29847392 - Lx6 LINE L1 -26 7434 6785 5 1274 264 122 0 0 chr13 90437011 90437060 -29847252 + URR1B DNA MER1_type 83 131 -94 5 1274 1100 222 30 50 chr13 90437060 90437363 -29846949 - RLTR13D2 LTR ERVK 0 1023 727 5 1274 965 271 67 30 chr13 90437363 90437735 -29846577 - Lx8 LINE L1 -6 7467 7082 6 1274 526 289 63 11 chr13 90438153 90438328 -29845984 - Lx8 LINE L1 -489 6984 6801 6 1274 280 173 37 0 chr13 90438328 90438409 -29845903 + (TCTA)n Simple_repeat Simple_repeat 4 87 0 6 1274 328 206 18 27 chr13 90438414 90438524 -29845788 + (TA)n Simple_repeat Simple_repeat 2 110 0 6 1274 890 285 80 19 chr13 90438530 90438906 -29845406 - Lx8 LINE L1 -692 6781 6383 6 1274 592 314 69 53 chr13 90438900 90439583 -29844729 - L1M2 LINE L1 -449 5437 4771 6 159 271 367 77 43 chr13 90439600 90439899 -29844413 + MamRep605 Unknown Unknown 35 343 -533 6 1275 291 284 9 73 chr13 90439939 90440049 -29844263 + MamRep605 Unknown Unknown 417 519 -357 6 1275 218 360 108 32 chr13 90440427 90440585 -29843727 + MER5A DNA MER1_type 19 188 -1 6 1275 313 338 24 94 chr13 90440718 90440888 -29843424 + MER5A DNA MER1_type 3 160 -29 6 1275 206 128 0 25 chr13 90441516 90441556 -29842756 + (TATG)n Simple_repeat Simple_repeat 2 40 0 6 1275 353 331 79 16 chr13 90441897 90442023 -29842289 + RSINE1 SINE B4 15 148 -17 6 1275 183 129 0 0 chr13 90442029 90442060 -29842252 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1275 414 0 0 0 chr13 90442070 90442116 -29842196 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1275 1280 52 0 11 chr13 90442634 90442808 -29841504 + (GGGAGA)n Simple_repeat Simple_repeat 4 175 0 6 1275 31 0 0 0 chr13 90442955 90442986 -29841326 + AT_rich Low_complexity Low_complexity 1 31 0 6 1275 543 16 0 0 chr13 90443044 90443108 -29841204 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 6 1275 233 245 0 0 chr13 90443114 90443163 -29841149 - PB1D10 SINE Alu -24 93 45 6 1275 1271 96 11 16 chr13 90443164 90443355 -29840957 - B2_Mm1t SINE B2 -1 192 3 6 1275 261 0 0 0 chr13 90443726 90443755 -29840557 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1275 277 325 24 35 chr13 90446018 90446169 -29838143 - L1MD LINE L1 -3640 2506 2353 6 1275 610 323 102 12 chr13 90446169 90446367 -29837945 - MLT1A0 LTR MaLR 0 365 144 6 1275 216 0 0 0 chr13 90446367 90446391 -29837921 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6 1275 610 323 102 12 chr13 90446391 90446527 -29837785 - MLT1A0 LTR MaLR -222 143 1 6 1275 277 325 24 35 chr13 90446527 90446544 -29837768 - L1MD LINE L1 -3794 2352 2340 6 1275 522 338 36 13 chr13 90446546 90446771 -29837541 - Tigger5 DNA MER2_type -4 2402 2173 6 1275 540 121 0 0 chr13 90446909 90447000 -29837312 + (CA)n Simple_repeat Simple_repeat 2 92 0 6 1275 4449 82 6 16 chr13 90447060 90447693 -29836619 + L1_Mus3 LINE L1 6010 6636 -2 6 1275 310 308 54 60 chr13 90447745 90447911 -29836401 - L1MDb LINE L1 -3851 2555 2391 6 1275 1021 228 104 72 chr13 90447948 90448392 -29835920 - L1MDb LINE L1 -5212 1197 740 6 1275 234 303 50 20 chr13 90448631 90448732 -29835580 - L1MDb LINE L1 -5919 490 387 6 1275 245 299 66 66 chr13 90448748 90448884 -29835428 + L2a LINE L2 3025 3160 -266 6 1275 247 345 77 34 chr13 90449323 90449530 -29834782 + L2a LINE L2 3205 3420 -6 6 1275 200 118 29 0 chr13 90450081 90450115 -29834197 + (GAAAA)n Simple_repeat Simple_repeat 3 37 0 6 1275 220 331 68 99 chr13 90450207 90450398 -29833914 + L2b LINE L2 3191 3375 0 6 1275 195 129 0 0 chr13 90450551 90450582 -29833730 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1275 5945 88 2 0 chr13 90450598 90451402 -29832910 - L1_Mus1 LINE L1 -6 6561 5756 6 1275 4115 146 41 18 chr13 90451402 90452379 -29831933 + L1_Mus4 LINE L1 5531 6631 -5 6 1275 187 115 19 37 chr13 90452473 90452527 -29831785 + A-rich Low_complexity Low_complexity 2 54 0 6 1275 2229 202 67 17 chr13 90452529 90452992 -29831320 - Lx7 LINE L1 -363 7333 6848 6 1275 901 266 66 117 chr13 90453799 90454254 -29830058 - RLTR12B LTR ERVK -43 485 54 6 1275 3144 282 76 22 chr13 90454343 90455385 -29828927 - Lx8 LINE L1 -106 7367 6270 6 1275 237 213 0 0 chr13 90455523 90455570 -29828742 - MER121 Unknown Unknown -210 202 156 6 1275 833 242 71 19 chr13 90456686 90456955 -29827357 - Tigger7 DNA MER2_type -8 2483 2201 6 1275 810 330 66 9 chr13 90456966 90457299 -29827013 - Tigger7 DNA MER2_type -2117 374 23 6 1275 4549 64 16 33 chr13 90457391 90458019 -29826293 - L1_Mus2 LINE L1 -3 6563 5947 6 1275 269 309 58 157 chr13 90458166 90458542 -29825770 + MLT1A1 LTR MaLR 66 404 -4 6 1275 16795 22 0 0 chr13 90459503 90462132 -29822180 - L1Md_T LINE L1 0 6582 3954 6 1275 296 320 38 19 chr13 90462292 90462397 -29821915 + MTEa LTR MaLR 5 111 -268 6 1275 599 306 48 31 chr13 90462484 90462713 -29821599 + MT2A LTR ERVL 230 462 -71 6 1275 513 0 0 0 chr13 90462716 90462773 -29821539 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1275 712 63 18 0 chr13 90462773 90462883 -29821429 + (GA)n Simple_repeat Simple_repeat 2 114 0 6 1275 498 306 95 113 chr13 90462921 90463418 -29820894 + MT2A LTR ERVL 46 533 0 6 1275 213 369 9 19 chr13 90465287 90465392 -29818920 + L2a LINE L2 3316 3419 -7 6 1275 1207 35 0 0 chr13 90465951 90466096 -29818216 + B1_Mm SINE Alu 1 145 -2 6 1275 189 0 0 0 chr13 90466098 90466119 -29818193 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1275 192 306 174 0 chr13 90466417 90466515 -29817797 - MIR SINE MIR -128 134 20 6 1275 30 27 0 0 chr13 90467551 90467588 -29816724 + AT_rich Low_complexity Low_complexity 1 37 0 6 1275 2474 68 0 3 chr13 90467674 90467996 -29816316 + Lx LINE L1 5678 5998 -656 6 1275 41 0 0 0 chr13 90467996 90468037 -29816275 + AT_rich Low_complexity Low_complexity 1 41 0 6 1275 8588 26 0 0 chr13 90468163 90469159 -29815153 - L1Md_T LINE L1 0 6582 5587 6 1275 3975 146 20 3 chr13 90469172 90469806 -29814506 + Lx LINE L1 6003 6647 -7 6 1275 2597 202 33 10 chr13 90470737 90470897 -29813415 + RLTR12B LTR ERVK 1 166 -362 6 1275 432 0 0 0 chr13 90470897 90470945 -29813367 + (TC)n Simple_repeat Simple_repeat 2 49 0 6 1275 2597 202 33 10 chr13 90470945 90471293 -29813019 + RLTR12B LTR ERVK 167 520 -8 6 1275 333 324 115 1 chr13 90471750 90471916 -29812396 - MIR SINE MIR -50 212 30 6 1275 1399 63 5 5 chr13 90472378 90472570 -29811742 - L1_Mm LINE L1 -1789 4094 3903 6 1275 2019 120 122 6 chr13 90472570 90472913 -29811399 + L1Md_F2 LINE L1 6185 6567 -15 6 1275 1555 30 5 5 chr13 90473392 90473591 -29810721 + L1Md_F3 LINE L1 6372 6570 -14 6 1275 272 294 142 1 chr13 90473839 90473973 -29810339 - Lx8 LINE L1 -230 7243 7079 6 1275 1155 63 0 0 chr13 90474418 90474561 -29809751 + B1_Mus2 SINE Alu 2 144 -3 6 1275 378 0 0 0 chr13 90474561 90474603 -29809709 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 6 1275 417 141 0 0 chr13 90476232 90476303 -29808009 + (TA)n Simple_repeat Simple_repeat 1 71 0 6 1275 372 22 0 0 chr13 90476326 90476371 -29807941 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1275 315 0 0 0 chr13 90478637 90478672 -29805640 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1275 613 231 129 0 chr13 90478676 90478823 -29805489 - B3A SINE B2 -32 166 1 6 1275 342 115 0 0 chr13 90481165 90481217 -29803095 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1275 848 275 89 0 chr13 90481538 90481774 -29802538 + B4 SINE B4 2 258 -34 6 1275 215 232 18 18 chr13 90481779 90481836 -29802476 + GA-rich Low_complexity Low_complexity 5 61 0 6 1275 243 0 0 0 chr13 90481906 90481933 -29802379 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1275 23 0 0 0 chr13 90482216 90482239 -29802073 + AT_rich Low_complexity Low_complexity 1 23 0 6 1275 965 334 41 15 chr13 90483853 90484196 -29800116 + ORR1E LTR MaLR 8 359 0 6 1275 187 396 75 9 chr13 90484770 90484877 -29799435 - MIR3 SINE MIR -81 127 14 6 1275 28 0 0 0 chr13 90486299 90486327 -29797985 + AT_rich Low_complexity Low_complexity 1 28 0 6 1275 5736 88 29 2 chr13 90486392 90487193 -29797119 - L1_Mus3 LINE L1 -5 6633 5812 6 1275 2804 102 0 0 chr13 90487194 90487576 -29796736 + L1_Mus3 LINE L1 5425 5806 -77 6 1275 1116 309 95 25 chr13 90487574 90488058 -29796254 + Lx8 LINE L1 6840 7357 -116 6 1275 396 0 0 0 chr13 90488132 90488176 -29796136 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1275 444 252 10 10 chr13 90489814 90489918 -29794394 + MLT1A1 LTR MaLR 26 129 -279 6 1275 1220 249 19 75 chr13 90490069 90490442 -29793870 + ORR1E LTR MaLR 4 355 -4 6 1275 286 305 20 40 chr13 90490485 90490584 -29793728 + MLT1A1 LTR MaLR 269 365 0 6 1275 534 16 0 0 chr13 90490794 90490857 -29793455 + (TG)n Simple_repeat Simple_repeat 2 64 0 6 1275 510 306 18 24 chr13 90491147 90491311 -29793001 - RSINE1 SINE B4 0 165 3 6 1275 315 347 54 20 chr13 90491926 90492129 -29792183 - L1M5 LINE L1 -1474 4672 4463 6 1275 513 290 0 0 chr13 90492791 90492898 -29791414 - PB1D10 SINE Alu -10 107 1 6 1275 216 336 94 20 chr13 90494007 90494156 -29790156 - MIRb SINE MIR 0 268 109 6 1275 240 286 63 0 chr13 90495218 90495281 -29789031 - ID4 SINE ID -13 70 4 6 1275 286 246 14 14 chr13 90495923 90495997 -29788315 + L1ME3 LINE L1 6000 6073 -89 6 1275 295 268 103 11 chr13 90496260 90496347 -29787965 - ORR1E LTR MaLR -253 106 12 6 1275 830 296 28 20 chr13 90496806 90497054 -29787258 + MTE2b LTR MaLR 5 254 -125 6 1275 273 299 182 20 chr13 90497049 90497148 -29787164 + MTE2a LTR MaLR 202 316 -63 6 1275 533 320 94 57 chr13 90497206 90497577 -29786735 - MLT2B1 LTR ERVL -130 390 6 6 1275 420 97 0 0 chr13 90497612 90497674 -29786638 + (TAAA)n Simple_repeat Simple_repeat 2 63 0 6 1275 553 111 30 0 chr13 90498961 90499060 -29785252 + (GAAA)n Simple_repeat Simple_repeat 3 104 0 6 1275 192 302 50 40 chr13 90499189 90499289 -29785023 - MIR3 SINE MIR -54 154 54 6 1275 21 0 0 0 chr13 90500188 90500209 -29784103 + AT_rich Low_complexity Low_complexity 1 21 0 1 1275 352 351 52 73 chr13 90500226 90500570 -29783742 - L2a LINE L2 -15 3411 3075 2 1275 1817 189 3 3 chr13 90502040 90502370 -29781942 + RLTR31A_Mm LTR ERVK 1 330 -254 3 1275 2514 64 0 0 chr13 90502371 90502714 -29781598 - L1_Mus2 LINE L1 -500 6066 5724 4 1275 1019 73 0 0 chr13 90502705 90502841 -29781471 + L1_Mus2 LINE L1 5451 5586 -297 4 1275 5757 109 12 119 chr13 90502842 90503940 -29780372 + L1Md_F3 LINE L1 5588 6567 -17 4 1275 35 41 0 0 chr13 90505728 90505777 -29778535 + AT_rich Low_complexity Low_complexity 1 49 0 5 1275 1924 138 9 59 chr13 90506450 90506788 -29777524 - ORR1A4 LTR MaLR -8 321 1 6 1275 7867 162 90 107 chr13 90506788 90507333 -29776979 - ORR1A4-int LTR MaLR 0 1963 1418 6 1275 567 0 0 0 chr13 90507333 90507396 -29776916 + (CACTC)n Simple_repeat Simple_repeat 2 64 0 7 1275 7867 170 92 104 chr13 90507396 90508916 -29775396 - ORR1A4-int LTR MaLR -546 1417 1 6 1275 627 101 785 3 chr13 90508916 90509051 -29775261 - ORR1A4 LTR MaLR 0 384 253 6 1275 296 214 0 35 chr13 90509362 90509420 -29774892 - ORR1A4 LTR MaLR -273 56 1 6 1275 182 150 25 0 chr13 90509541 90509581 -29774731 + CT-rich Low_complexity Low_complexity 3 43 0 8 1275 2302 208 30 58 chr13 90510396 90510875 -29773437 - RLTR26 LTR ERVK 0 642 178 9 1275 230 250 0 0 chr13 90510875 90510931 -29773381 - RMER17B LTR ERVK 0 958 903 1 1275 239 222 0 36 chr13 90511755 90511811 -29772501 + (TATG)n Simple_repeat Simple_repeat 1 54 0 1 1275 736 193 14 0 chr13 90512217 90512357 -29771955 + B1_Mur2 SINE Alu 3 144 -5 1 1275 32 26 0 0 chr13 90512448 90512487 -29771825 + AT_rich Low_complexity Low_complexity 1 39 0 1 1275 265 286 131 10 chr13 90512522 90512621 -29771691 + B1F2 SINE Alu 10 120 0 1 1275 214 82 61 0 chr13 90513186 90513235 -29771077 + (TTTG)n Simple_repeat Simple_repeat 3 54 0 1 1275 1134 75 0 20 chr13 90513235 90513385 -29770927 - B1_Mus1 SINE Alu 0 148 2 1 1275 180 0 0 0 chr13 90513391 90513411 -29770901 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1275 2098 145 3 0 chr13 90514677 90515002 -29769310 + ORR1A3 LTR MaLR 1 326 0 1 1275 530 13 51 0 chr13 90515452 90515531 -29768781 + (TATG)n Simple_repeat Simple_repeat 1 83 0 1 1275 198 329 14 28 chr13 90515889 90515961 -29768351 + MER5B DNA MER1_type 107 177 -1 2 1275 204 125 0 0 chr13 90516632 90516664 -29767648 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1275 288 244 167 68 chr13 90516668 90516800 -29767512 + MER5B DNA MER1_type 28 172 -6 2 1275 204 154 0 0 chr13 90517013 90517065 -29767247 + (CAGAGA)n Simple_repeat Simple_repeat 6 57 0 2 1275 629 154 0 11 chr13 90517169 90517346 -29766966 + (CAGAGA)n Simple_repeat Simple_repeat 4 178 0 2 1275 303 234 0 72 chr13 90517369 90517422 -29766890 + HAL1-3A_ME LINE L1 1976 2026 -832 2 1275 2636 112 22 12 chr13 90517422 90517836 -29766476 + L1_Mus4 LINE L1 6217 6634 -2 2 1275 303 234 0 72 chr13 90517836 90517865 -29766447 + HAL1-3A_ME LINE L1 2027 2052 -806 2 1275 18386 138 65 5 chr13 90517936 90519634 -29764678 - Lx LINE L1 -4 6650 4647 2 1275 218 32 32 0 chr13 90519634 90519665 -29764647 + (TTTG)n Simple_repeat Simple_repeat 3 34 0 2 1275 18386 173 85 7 chr13 90519665 90522737 -29761575 - Lx LINE L1 -1240 4646 1525 2 1275 1377 214 11 7 chr13 90522749 90523036 -29761276 - L1VL4 LINE L1 -5975 327 40 2 1275 351 0 0 0 chr13 90523072 90523111 -29761201 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1275 270 73 0 0 chr13 90523111 90523151 -29761161 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1275 710 180 108 16 chr13 90524378 90524564 -29759748 - Lx9 LINE L1 -205 7439 7237 3 1275 186 349 44 44 chr13 90524806 90524941 -29759371 - L2a LINE L2 -317 3109 2975 3 1275 22 0 0 0 chr13 90530073 90530095 -29754217 + AT_rich Low_complexity Low_complexity 1 22 0 3 1275 26 0 0 0 chr13 90530120 90530146 -29754166 + AT_rich Low_complexity Low_complexity 1 26 0 3 1275 525 295 51 28 chr13 90531316 90531789 -29752523 + L1MB2 LINE L1 5108 5607 -564 3 1275 871 134 7 40 chr13 90531789 90531937 -29752375 + B1_Mur3 SINE Alu 1 143 -6 3 1275 233 118 0 19 chr13 90531967 90532019 -29752293 + (CAAA)n Simple_repeat Simple_repeat 3 53 0 3 1275 1194 271 48 41 chr13 90532021 90532068 -29752244 + L1MB2 LINE L1 5600 5642 -529 3 1275 981 244 200 20 chr13 90532068 90532423 -29751889 - MTD LTR MaLR 0 419 1 3 1275 1194 271 48 41 chr13 90532423 90532891 -29751421 + L1MB2 LINE L1 5643 6119 -52 3 1275 215 317 142 31 chr13 90532907 90533034 -29751278 + B1F SINE Alu 9 149 0 4 1275 1895 150 3 64 chr13 90535806 90536148 -29748164 - ORR1A4 LTR MaLR -8 321 1 4 1275 1366 161 9 0 chr13 90537407 90537630 -29746682 - URR1B DNA MER1_type 0 225 1 4 1275 560 316 63 63 chr13 90538039 90538323 -29745989 - B4A SINE B4 -6 286 3 4 1275 283 378 165 0 chr13 90539376 90539564 -29744748 + MER20 DNA MER1_type 1 219 0 4 1275 395 313 17 34 chr13 90539684 90539803 -29744509 - PB1 SINE Alu 0 127 11 4 1275 542 273 64 41 chr13 90539895 90540067 -29744245 + B3A SINE B2 1 176 -22 4 1275 770 245 44 105 chr13 90540447 90540675 -29743637 + B3 SINE B2 2 215 -1 4 1275 25 83 0 0 chr13 90541581 90541641 -29742671 + AT_rich Low_complexity Low_complexity 1 60 0 4 1275 440 206 48 19 chr13 90542489 90542593 -29741719 - RMER13B LTR ERVK -44 864 758 4 1275 3772 155 104 36 chr13 90542954 90543683 -29740629 - RMER13B LTR ERVK -129 779 1 4 1275 249 194 18 88 chr13 90543684 90543797 -29740515 - Lx7 LINE L1 -28 7668 7564 5 1275 387 0 0 0 chr13 90543839 90543882 -29740430 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1275 1674 233 51 18 chr13 90543895 90543946 -29740366 - Lx7 LINE L1 -279 7417 7354 5 1275 207 69 0 0 chr13 90543946 90543975 -29740337 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 1275 1674 233 51 18 chr13 90543975 90544377 -29739935 - Lx7 LINE L1 -343 7353 6949 5 1275 513 0 0 0 chr13 90544534 90544591 -29739721 + (TA)n Simple_repeat Simple_repeat 1 57 0 5 1275 24 67 0 0 chr13 90546501 90546546 -29737766 + AT_rich Low_complexity Low_complexity 1 45 0 5 1275 205 386 50 19 chr13 90547781 90547942 -29736370 + L2a LINE L2 2963 3128 -298 5 1275 240 366 0 0 chr13 90548628 90548699 -29735613 - MER5A DNA MER1_type -92 97 27 5 1275 327 390 75 12 chr13 90548816 90549070 -29735242 - L2a LINE L2 0 3426 3157 5 1275 227 167 24 0 chr13 90550200 90550242 -29734070 + U3 snRNA snRNA 3 45 -172 5 1275 14319 44 1 3 chr13 90551789 90554332 -29729980 - L1Md_F3 LINE L1 -14 6570 4029 5 1275 213 39 0 0 chr13 90554880 90554906 -29729406 + (CAATG)n Simple_repeat Simple_repeat 1 26 0 6 1275 290 263 74 0 chr13 90555232 90555327 -29728985 - Lx8 LINE L1 -146 7327 7226 6 1275 1232 210 47 34 chr13 90556125 90556446 -29727866 - Lx5 LINE L1 0 7050 6726 6 1275 2840 89 98 0 chr13 90556446 90556832 -29727480 + RMER17B LTR ERVK 2 398 -560 6 1275 806 56 9 0 chr13 90556832 90556940 -29727372 + (TC)n Simple_repeat Simple_repeat 2 110 0 6 1275 2840 89 98 0 chr13 90556940 90556992 -29727320 + RMER17B LTR ERVK 399 481 -477 6 1275 1724 139 14 7 chr13 90556989 90557265 -29727047 + RMER17B LTR ERVK 653 930 -28 6 1275 1130 194 38 8 chr13 90557279 90557518 -29726794 - Lx4B LINE L1 -312 6746 6501 6 1275 25 0 0 0 chr13 90558044 90558069 -29726243 + AT_rich Low_complexity Low_complexity 1 25 0 6 1275 418 33 16 16 chr13 90558744 90558805 -29725507 + (TC)n Simple_repeat Simple_repeat 1 61 0 6 1275 397 224 40 0 chr13 90559128 90559204 -29725108 - B2_Mm2 SINE B2 -114 81 3 6 1275 21 0 0 0 chr13 90559237 90559258 -29725054 + AT_rich Low_complexity Low_complexity 1 21 0 6 1275 250 222 0 0 chr13 90561052 90561097 -29723215 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1275 475 242 12 6 chr13 90561101 90561263 -29723049 + (TATG)n Simple_repeat Simple_repeat 4 166 0 7 1275 477 0 0 0 chr13 90561266 90561319 -29722993 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 7 1275 2560 250 28 31 chr13 90561586 90562233 -29722079 + ORR1D2-int LTR MaLR 653 1297 -73 7 1275 1171 235 96 33 chr13 90562237 90562572 -29721740 + ORR1D2 LTR MaLR 13 368 -2 7 1275 245 109 22 0 chr13 90563148 90563194 -29721118 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1275 621 350 29 29 chr13 90563228 90563469 -29720843 - B4A SINE B4 -47 245 5 7 1275 375 23 0 0 chr13 90563471 90563515 -29720797 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1275 510 204 0 0 chr13 90563515 90563628 -29720684 + (TA)n Simple_repeat Simple_repeat 2 114 0 7 1275 228 289 13 0 chr13 90564064 90564140 -29720172 - LTR79 LTR ERVL -48 479 403 7 1275 367 356 62 6 chr13 90564949 90565110 -29719202 + MLT1K LTR MaLR 417 586 -9 7 1275 405 216 159 49 chr13 90565142 90565288 -29719024 + LTR48 LTR ERV1 3 144 -643 8 1275 1151 189 125 7 chr13 90565474 90565637 -29718675 + Lx9 LINE L1 7304 7499 -145 8 1275 234 0 0 0 chr13 90565637 90565663 -29718649 + (TG)n Simple_repeat Simple_repeat 1 26 0 8 1275 1151 189 125 7 chr13 90565663 90565803 -29718509 + Lx9 LINE L1 7500 7643 -1 8 1275 514 254 16 0 chr13 90565869 90565991 -29718321 - Lx8 LINE L1 -955 6518 6395 8 1275 615 154 0 0 chr13 90565980 90566084 -29718228 - Lx9 LINE L1 -774 6870 6767 8 1275 1714 218 14 19 chr13 90566089 90566378 -29717934 - ORR1D1 LTR MaLR -7 367 79 8 1275 5783 113 102 5 chr13 90566378 90567274 -29717038 - RLTR13C1 LTR ERVK 0 983 1 8 1275 1714 218 14 19 chr13 90567274 90567345 -29716967 - ORR1D1 LTR MaLR -296 78 9 8 1275 2910 78 15 8 chr13 90567305 90567703 -29716609 + LTRIS3 LTR ERV1 112 512 0 8 1275 8861 108 144 104 chr13 90567715 90569181 -29715131 - L1_Mus1 LINE L1 0 6567 4844 8 1275 2854 55 53 0 chr13 90569181 90569561 -29714751 - RLTR1B LTR ERV1 -102 410 11 8 159 8861 108 144 104 chr13 90569561 90571108 -29713204 - L1_Mus1 LINE L1 0 4843 3022 8 1276 832 217 188 0 chr13 90571136 90571376 -29712936 - Lx9 LINE L1 -878 6766 6482 8 1276 26 30 0 0 chr13 90572444 90572477 -29711835 + AT_rich Low_complexity Low_complexity 1 33 0 9 1276 4866 214 76 21 chr13 90572873 90574178 -29710134 - Lx4A LINE L1 -1 7057 5681 9 1276 10069 165 51 25 chr13 90574181 90575429 -29708883 - Lx4A LINE L1 -423 5454 4189 9 1276 3832 139 91 79 chr13 90575429 90576320 -29707992 - RLTR13D6 LTR ERVK 0 902 1 9 1276 10069 165 51 25 chr13 90576320 90577262 -29707050 - Lx4A LINE L1 -1689 4188 3207 9 1276 245 68 0 22 chr13 90577269 90577314 -29706998 - MusHAL1 LINE L1 -836 1876 1833 9 1276 13324 16 0 0 chr13 90577316 90579642 -29704670 - L1Md_T LINE L1 0 6582 4257 9 1276 6960 177 62 53 chr13 90579642 90581806 -29702506 - Lx4A LINE L1 -2839 3038 852 9 1276 364 389 0 22 chr13 90582492 90582626 -29701686 - RSINE1 SINE B4 -33 132 2 9 1276 36844 8 0 1 chr13 90582648 90588614 -29695698 + L1Md_A LINE L1 1 5586 -297 9 1276 8985 6 0 0 chr13 90588614 90589610 -29694702 + L1Md_A LINE L1 5587 6582 0 9 1276 7341 65 0 0 chr13 90589617 90590603 -29693709 + L1Md_F3 LINE L1 4601 5586 -297 9 1276 8171 39 2 1 chr13 90590603 90591584 -29692728 + L1Md_F3 LINE L1 5587 6568 -16 9 1276 25 31 0 0 chr13 90591592 90591624 -29692688 + AT_rich Low_complexity Low_complexity 1 32 0 9 1276 5091 93 1 1 chr13 90591628 90592316 -29691996 + L1_Mus1 LINE L1 5880 6567 0 9 1276 7826 115 16 27 chr13 90592328 90593683 -29690629 + RMER16-int LTR ERVK 2999 4338 -1068 1 1276 543 299 19 19 chr13 90593678 90593947 -29690365 + RLTR6-int LTR ERV1 7387 7655 -123 1 1276 568 236 194 62 chr13 90594331 90594656 -29689656 + RLTR9A LTR ERVK 1 368 0 1 1276 2242 211 83 72 chr13 90594657 90595199 -29689113 - RMER19C LTR ERVK -63 548 1 1 1276 1202 195 30 8 chr13 90595199 90595463 -29688849 - Lx9 LINE L1 -931 6713 6444 1 1276 22 56 0 0 chr13 90595542 90595578 -29688734 + AT_rich Low_complexity Low_complexity 1 36 0 1 1276 463 222 0 0 chr13 90595685 90595802 -29688510 - Lx9 LINE L1 -8 7636 7520 1 1276 990 129 0 0 chr13 90595848 90595995 -29688317 - B1_Mus1 SINE Alu 0 148 2 1 1276 577 234 117 21 chr13 90595995 90596235 -29688077 - Lx9 LINE L1 -114 7530 7268 1 1276 1295 107 5 19 chr13 90596259 90596469 -29687843 - Lx3_Mus LINE L1 -8 7001 6795 1 1276 1608 118 15 4 chr13 90596469 90596732 -29687580 + L1_Mur1 LINE L1 4873 5138 -748 1 1276 2084 192 65 1 chr13 90596727 90597176 -29687136 + Lx3C LINE L1 6511 6995 -5 1 1276 306 0 0 0 chr13 90597180 90597214 -29687098 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1276 781 189 5 71 chr13 90598091 90598302 -29686010 - Lx7 LINE L1 0 7696 7500 1 1276 3144 182 15 4 chr13 90598629 90599153 -29685159 + RLTR17 LTR ERVK 163 692 0 1 1276 1960 90 77 3 chr13 90599191 90599503 -29684809 + Lx3_Mus LINE L1 6631 6965 -44 1 1276 336 48 0 0 chr13 90599511 90599553 -29684759 + (TTAA)n Simple_repeat Simple_repeat 1 42 0 1 1276 223 28 27 27 chr13 90600059 90600096 -29684216 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1 1276 201 398 0 11 chr13 90600394 90600498 -29683814 + MIRb SINE MIR 53 155 -107 1 1276 359 41 0 20 chr13 90601000 90601050 -29683262 + (TG)n Simple_repeat Simple_repeat 2 50 0 1 1276 207 0 0 0 chr13 90602688 90602711 -29681601 + (TG)n Simple_repeat Simple_repeat 2 24 0 1 1276 276 273 0 0 chr13 90602894 90602971 -29681341 + (TA)n Simple_repeat Simple_repeat 1 77 0 1 1276 197 308 90 0 chr13 90603108 90603186 -29681126 - L4 LINE RTE -443 1586 1502 1 1276 703 359 80 39 chr13 90604377 90604789 -29679523 + MER115 DNA Tip100 184 612 -81 1 1276 687 84 0 0 chr13 90605421 90605516 -29678796 + (TC)n Simple_repeat Simple_repeat 2 96 0 1 1276 354 316 99 77 chr13 90606457 90606810 -29677502 + L1ME3 LINE L1 5802 6162 0 1 1276 24 53 0 0 chr13 90607127 90607165 -29677147 + AT_rich Low_complexity Low_complexity 1 38 0 1 1276 22 35 0 0 chr13 90607239 90607268 -29677044 + AT_rich Low_complexity Low_complexity 1 29 0 1 1276 456 302 18 48 chr13 90607698 90607865 -29676447 + RSINE1 SINE B4 4 165 0 1 1276 25 99 0 0 chr13 90607877 90607958 -29676354 + AT_rich Low_complexity Low_complexity 1 81 0 1 1276 382 256 50 25 chr13 90608003 90608123 -29676189 + Charlie4a DNA MER1_type 386 508 0 1 1276 2346 194 25 23 chr13 90608175 90608660 -29675652 + Lx5 LINE L1 6489 6974 -76 1 1276 265 284 0 29 chr13 90608678 90608747 -29675565 + ID_B1 SINE B4 88 154 -70 1 1276 262 303 26 52 chr13 90608747 90608793 -29675519 + PB1D7 SINE Alu 7 118 -2 1 1276 275 301 20 61 chr13 90609430 90609529 -29674783 + MIRb SINE MIR 64 158 -110 1 1276 240 298 0 0 chr13 90610188 90610245 -29674067 + G-rich Low_complexity Low_complexity 2 58 0 1 1276 214 237 0 0 chr13 90610536 90610574 -29673738 + C-rich Low_complexity Low_complexity 3 40 0 1 1276 524 190 28 28 chr13 90610574 90610753 -29673559 + CT-rich Low_complexity Low_complexity 2 180 0 1 1276 4276 177 42 41 chr13 90611338 90612244 -29672068 - RMER13B LTR ERVK 0 908 2 1 1276 710 152 14 7 chr13 90613493 90613632 -29670680 + Lx2B LINE L1 6855 6994 -6 1 1276 385 319 62 84 chr13 90614599 90615085 -29669227 - L1MB7 LINE L1 -45 6139 5665 1 1276 452 318 89 41 chr13 90615089 90615420 -29668892 - ORR1E LTR MaLR -12 367 1 1 1276 608 256 118 7 chr13 90615468 90615887 -29668425 - L1MB7 LINE L1 -583 5590 5126 1 1276 29 60 0 0 chr13 90615887 90615937 -29668375 + AT_rich Low_complexity Low_complexity 1 50 0 1 1276 516 122 0 0 chr13 90615958 90616040 -29668272 + (TA)n Simple_repeat Simple_repeat 2 83 0 1 1276 642 284 178 38 chr13 90616203 90616682 -29667630 + L1MA9 LINE L1 5527 6093 -219 1 1276 532 301 94 39 chr13 90617034 90617290 -29667022 + B4A SINE B4 1 270 -22 1 1276 453 19 0 0 chr13 90617321 90617375 -29666937 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1276 328 319 96 48 chr13 90619905 90620093 -29664219 - L1M5 LINE L1 -610 5563 5367 1 1276 787 124 16 0 chr13 90621122 90621251 -29663061 - URR1A DNA MER1_type -15 211 81 1 1276 1531 155 25 82 chr13 90621411 90621728 -29662584 + ORR1B1 LTR MaLR 41 339 -55 1 1276 1751 153 138 20 chr13 90621837 90622178 -29662134 - ORR1B1 LTR MaLR 0 394 14 1 1276 214 91 89 22 chr13 90622212 90622302 -29662010 + (TATAG)n Simple_repeat Simple_repeat 5 100 0 1 1276 381 22 0 0 chr13 90622757 90622803 -29661509 + (T)n Simple_repeat Simple_repeat 1 46 0 1 1276 227 280 231 0 chr13 90623217 90623360 -29660952 - L1MEd LINE L1 -4554 1595 1420 1 1276 3269 46 2 2 chr13 90623436 90623832 -29660480 - MTA_Mm LTR MaLR 0 396 1 1 1276 334 386 51 36 chr13 90624622 90624955 -29659357 - L1MEd LINE L1 -5338 781 444 1 1276 297 270 16 0 chr13 90625104 90625167 -29659145 + RSINE1 SINE B4 93 156 -9 1 1276 259 327 123 69 chr13 90626853 90627129 -29657183 + B4 SINE B4 2 292 0 1 1276 1101 314 67 33 chr13 90627592 90628133 -29656179 + Tigger9b DNA MER2_type 1 559 -65 1 1276 210 37 0 0 chr13 90628218 90628245 -29656067 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1276 513 320 68 30 chr13 90628266 90628661 -29655651 - L1MD2 LINE L1 -56 6186 5773 1 1276 22 0 0 0 chr13 90628680 90628702 -29655610 + AT_rich Low_complexity Low_complexity 1 22 0 1 1276 595 293 37 8 chr13 90628890 90629131 -29655181 - L1MA4 LINE L1 -361 5939 5692 1 1276 465 197 182 47 chr13 90629130 90629322 -29654990 - Lx5 LINE L1 -861 6189 5972 1 1276 2289 233 50 41 chr13 90629309 90629666 -29654646 + Lx5 LINE L1 6460 6820 -230 1 1276 432 99 0 0 chr13 90629666 90629737 -29654575 + (CCTG)n Simple_repeat Simple_repeat 2 72 0 1 1276 2289 233 50 41 chr13 90629737 90629820 -29654492 + Lx5 LINE L1 6821 6904 -146 1 1276 513 58 0 0 chr13 90629820 90629889 -29654423 + (TG)n Simple_repeat Simple_repeat 2 70 0 1 1276 2289 233 50 41 chr13 90629889 90630033 -29654279 + Lx5 LINE L1 6905 7050 0 1 1276 491 257 53 107 chr13 90630036 90630223 -29654089 + ORR1D2 LTR MaLR 192 368 -2 1 1276 761 329 35 9 chr13 90631429 90631769 -29652543 + MER63D DNA AcHobo 24 372 -689 1 1276 24 32 0 0 chr13 90631769 90631800 -29652512 + AT_rich Low_complexity Low_complexity 1 31 0 1 1276 183 204 0 75 chr13 90632797 90632850 -29651462 - L2a LINE L2 -258 3168 3120 1 1276 333 0 0 0 chr13 90632922 90632959 -29651353 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 1276 285 29 0 0 chr13 90633672 90633706 -29650606 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 1 1276 379 276 142 0 chr13 90634877 90635011 -29649301 - RSINE1 SINE B4 -2 163 11 1 1276 363 264 119 5 chr13 90635028 90635222 -29649090 + Charlie5 DNA MER1_type 2406 2621 -3 1 1276 22 35 0 0 chr13 90636170 90636199 -29648113 + AT_rich Low_complexity Low_complexity 1 29 0 1 1276 336 24 0 0 chr13 90636295 90636336 -29647976 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1 1276 462 254 131 23 chr13 90636340 90636607 -29647705 + L1MA4 LINE L1 5651 5946 -366 1 1276 290 296 37 12 chr13 90638465 90638547 -29645765 - B1F1 SINE Alu -53 96 13 1 1276 942 279 8 25 chr13 90638699 90638938 -29645374 - MTE2b LTR MaLR -97 282 48 1 1276 2010 264 25 25 chr13 90639201 90639796 -29644516 + RCHARR1 DNA MER1_type 372 966 -8 1 1276 297 283 80 30 chr13 90640142 90640251 -29644061 - B4A SINE B4 -2 290 170 1 1276 1195 68 0 0 chr13 90640494 90640641 -29643671 + B1_Mus1 SINE Alu 2 148 0 1 1276 234 72 70 18 chr13 90640641 90640698 -29643614 + A-rich Low_complexity Low_complexity 1 60 0 1 1276 264 320 29 10 chr13 90640903 90641007 -29643305 - L2a LINE L2 -1 3425 3320 1 1276 576 278 107 47 chr13 90642988 90643241 -29641071 + MER121 Unknown Unknown 43 310 -102 1 1276 266 220 167 43 chr13 90644693 90644831 -29639481 - L1ME4a LINE L1 -10 6114 5960 1 1276 465 19 0 0 chr13 90645115 90645169 -29639143 + (TTCC)n Simple_repeat Simple_repeat 3 56 0 1 1276 1163 252 25 18 chr13 90645171 90645450 -29638862 - Lx6 LINE L1 0 7460 7180 1 1276 393 229 5 27 chr13 90645900 90646084 -29638228 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1276 219 180 20 0 chr13 90646213 90646263 -29638049 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 1 1276 668 271 81 19 chr13 90646546 90646757 -29637555 + B4 SINE B4 3 226 -66 1 1276 732 281 40 0 chr13 90646761 90646960 -29637352 + B3 SINE B2 4 210 -6 1 1276 28 29 0 0 chr13 90646960 90646995 -29637317 + AT_rich Low_complexity Low_complexity 1 35 0 1 1276 453 294 5 38 chr13 90647048 90647310 -29637002 + (CATATA)n Simple_repeat Simple_repeat 1 253 0 1 1276 344 337 17 17 chr13 90647233 90647408 -29636904 + (CA)n Simple_repeat Simple_repeat 1 175 0 1 1276 283 313 24 0 chr13 90647493 90647576 -29636736 + MIRb SINE MIR 117 201 -67 1 1276 243 0 0 0 chr13 90649749 90649776 -29634536 + (TTTTA)n Simple_repeat Simple_repeat 1 27 0 1 1276 215 174 0 21 chr13 90652447 90652494 -29631818 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1 1276 24 0 0 0 chr13 90653209 90653233 -29631079 + AT_rich Low_complexity Low_complexity 1 24 0 1 1276 523 276 140 61 chr13 90654185 90654513 -29629799 + MLT2B4 LTR ERVL 30 383 -173 1 1276 252 372 17 17 chr13 90654662 90654777 -29629535 + MLT2B4 LTR ERVL 445 559 0 1 1276 207 182 0 0 chr13 90656511 90656544 -29627768 + (TATG)n Simple_repeat Simple_repeat 2 34 0 1 1276 1040 337 112 90 chr13 90658344 90659201 -29625111 - FordPrefect DNA Tip100 -240 1443 568 2 1276 1691 208 60 17 chr13 90659270 90659466 -29624846 - ORR1D1 LTR MaLR -6 368 177 2 1276 744 12 0 0 chr13 90659466 90659551 -29624761 + (GA)n Simple_repeat Simple_repeat 2 86 0 2 1276 1691 208 60 17 chr13 90659551 90659707 -29624605 - ORR1D1 LTR MaLR -198 176 3 2 1276 417 285 97 0 chr13 90660232 90660376 -29623936 + MIR SINE MIR 84 241 -21 2 1276 193 380 37 37 chr13 90660803 90660937 -29623375 + L2b LINE L2 3237 3370 -5 2 1276 216 294 57 34 chr13 90661907 90661995 -29622317 + RSINE1 SINE B4 45 134 -31 2 1276 428 284 191 40 chr13 90662458 90662934 -29621378 - L1MC4 LINE L1 -662 7380 6833 2 1276 520 226 453 0 chr13 90663595 90663958 -29620354 - L1ME1 LINE L1 -259 5920 5394 2 1276 240 339 57 82 chr13 90663959 90664081 -29620231 - PB1D7 SINE Alu 0 120 2 2 1276 320 277 162 31 chr13 90664085 90664573 -29619739 - L1ME1 LINE L1 -751 5395 4844 2 1276 495 0 0 0 chr13 90664769 90664824 -29619488 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 2 1276 271 231 62 0 chr13 90664894 90664959 -29619353 + B4A SINE B4 6 74 -218 2 1276 257 169 17 0 chr13 90665032 90665091 -29619221 + (CATA)n Simple_repeat Simple_repeat 1 60 0 2 1276 1770 204 213 57 chr13 90665727 90666267 -29618045 - RMER19B LTR ERVK 0 902 279 2 1276 738 302 49 0 chr13 90666416 90666621 -29617691 + B3 SINE B2 2 216 0 2 1276 387 310 142 70 chr13 90666653 90667041 -29617271 - L1ME1 LINE L1 -1836 4310 3895 2 1276 262 279 114 26 chr13 90667237 90667429 -29616883 - L1ME1 LINE L1 -2471 3675 3462 2 1276 1141 96 38 33 chr13 90667431 90667494 -29616818 - B2_Mm2 SINE B2 -9 186 117 2 1276 2702 61 6 6 chr13 90667494 90667840 -29616472 + ORR1A1 LTR MaLR 1 346 0 2 1276 1141 96 38 33 chr13 90667840 90667960 -29616352 - B2_Mm2 SINE B2 -79 116 2 2 1276 534 189 98 46 chr13 90667972 90668166 -29616146 - Lx9 LINE L1 -1 7643 7440 2 1276 354 149 0 47 chr13 90668204 90668331 -29615981 + (CAGAGA)n Simple_repeat Simple_repeat 2 122 0 2 1276 345 282 13 0 chr13 90668331 90668409 -29615903 - RSINE1 SINE B4 -33 132 54 2 1276 503 281 224 64 chr13 90668477 90669027 -29615285 - L1ME1 LINE L1 -2696 3450 2813 2 1276 861 222 137 22 chr13 90669164 90669390 -29614922 - RMER19C LTR ERVK 0 611 360 2 1276 1107 96 0 0 chr13 90669418 90669564 -29614748 - B1_Mus1 SINE Alu -2 146 1 2 1276 6193 112 15 0 chr13 90669747 90670849 -29613463 + L1VL2 LINE L1 92 1213 -2402 2 1276 3507 91 40 35 chr13 90670845 90671447 -29612865 + L1VL2 LINE L1 2385 2989 -626 2 1276 26 0 0 0 chr13 90671646 90671672 -29612640 + AT_rich Low_complexity Low_complexity 1 26 0 2 1276 684 267 62 34 chr13 90671697 90671906 -29612406 + B3 SINE B2 1 215 -1 2 1276 4900 101 10 1 chr13 90672187 90672890 -29611422 + L1_Mus4 LINE L1 5923 6631 -5 2 1276 252 77 0 0 chr13 90672929 90672968 -29611344 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1276 2299 166 84 8 chr13 90672987 90673582 -29610730 + RLTR17 LTR ERVK 1 674 -18 2 1276 201 180 0 0 chr13 90673805 90673855 -29610457 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1276 3167 53 10 2 chr13 90674933 90675326 -29608986 - MTA_Mm LTR MaLR 0 396 1 2 1276 392 245 43 0 chr13 90675401 90675495 -29608817 + ORR1D2 LTR MaLR 1 98 -272 2 1276 392 228 43 11 chr13 90675508 90675601 -29608711 + ORR1D2 LTR MaLR 269 364 -6 2 1276 1737 209 60 94 chr13 90675630 90675850 -29608462 - RLTR12A LTR ERVK 0 568 342 2 1276 1140 75 0 0 chr13 90675850 90675997 -29608315 - B1_Mus2 SINE Alu 0 147 1 2 1276 1737 209 60 94 chr13 90675997 90676361 -29607951 - RLTR12A LTR ERVK -227 341 4 2 1276 577 323 129 5 chr13 90676412 90676614 -29607698 + ORR1E LTR MaLR 11 237 -122 2 1276 266 233 0 16 chr13 90676627 90676688 -29607624 + ORR1E LTR MaLR 320 379 0 2 1276 2481 211 34 28 chr13 90677676 90678213 -29606099 - Lx5 LINE L1 0 7050 6511 2 1276 1376 165 22 5 chr13 90678206 90678451 -29605861 + Lx2B LINE L1 5427 5680 -1320 2 1276 22904 138 76 11 chr13 90679089 90684933 -29599379 - L1_Mus3 LINE L1 0 6638 397 2 1276 266 0 29 0 chr13 90685006 90685040 -29599272 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1276 1023 97 21 0 chr13 90685050 90685194 -29599118 - B1_Mus1 SINE Alu 0 148 2 2 1276 313 22 43 0 chr13 90687699 90687745 -29596567 + (CAAAAA)n Simple_repeat Simple_repeat 2 49 0 2 1276 22 0 0 0 chr13 90687857 90687879 -29596433 + AT_rich Low_complexity Low_complexity 1 22 0 2 1276 623 272 35 0 chr13 90687973 90688175 -29596137 - L1MA9 LINE L1 -313 5999 5791 2 1276 522 0 0 0 chr13 90688190 90688248 -29596064 + (TC)n Simple_repeat Simple_repeat 1 58 0 2 1276 317 253 23 11 chr13 90688253 90688341 -29595971 - RLTR15 LTR ERVK -257 102 14 2 1276 392 264 66 0 chr13 90688384 90688505 -29595807 - L1MA9 LINE L1 -540 5751 5623 2 1276 534 303 66 70 chr13 90688714 90688941 -29595371 + MLT1A0 LTR MaLR 123 348 -17 2 1276 809 287 44 41 chr13 90688949 90689269 -29595043 - L1MC LINE L1 -681 5652 5332 2 1276 302 0 26 0 chr13 90689269 90689307 -29595005 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1276 730 268 71 33 chr13 90689326 90689538 -29594774 - B4 SINE B4 -4 288 69 2 1276 363 269 75 165 chr13 90689577 90689898 -29594414 - L1MC LINE L1 -1588 4558 4267 2 1276 501 158 16 8 chr13 90689918 90690039 -29594273 + (TA)n Simple_repeat Simple_repeat 2 123 0 2 1276 550 336 50 80 chr13 90691890 90692252 -29592060 - ORR1E LTR MaLR 0 359 9 2 1276 2190 127 31 28 chr13 90694236 90694491 -29589821 - Lx LINE L1 -1 6653 6401 2 1276 2991 32 0 0 chr13 90694491 90694837 -29589475 - ORR1A1 LTR MaLR 0 346 1 2 1276 2190 127 31 28 chr13 90694837 90694969 -29589343 - Lx LINE L1 -254 6400 6265 2 1276 1225 177 68 16 chr13 90695232 90695381 -29588931 - Lx9 LINE L1 -1 7643 7494 2 1276 288 111 0 0 chr13 90695381 90695426 -29588886 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1276 1225 177 68 16 chr13 90695426 90695586 -29588726 - Lx9 LINE L1 -151 7493 7318 2 1276 2988 178 37 9 chr13 90695665 90696209 -29588103 - Lx LINE L1 0 6654 6096 2 1276 2513 81 0 7 chr13 90696209 90696604 -29587708 - Lx2 LINE L1 -1092 5905 5511 2 1276 661 275 45 6 chr13 90696610 90696789 -29587523 - Lx9 LINE L1 -377 7267 7082 2 1276 975 121 0 0 chr13 90697083 90697223 -29587089 + B1_Mus1 SINE Alu 9 148 0 2 1276 1351 191 31 38 chr13 90697563 90697851 -29586461 - ORR1C2 LTR MaLR -1 383 98 2 1276 4355 163 44 15 chr13 90698147 90699020 -29585292 - Lx2B LINE L1 -625 6375 5486 2 1276 506 299 41 7 chr13 90699926 90700071 -29584241 - MER58B DNA MER1_type -23 318 169 2 1276 1640 240 66 50 chr13 90701000 90701483 -29582829 - Lx7 LINE L1 -281 7415 6925 2 1276 306 0 0 0 chr13 90701483 90701517 -29582795 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 159 929 284 84 5 chr13 90701520 90701903 -29582409 + L1MA5A LINE L1 4862 5274 -869 2 1277 234 98 39 19 chr13 90702034 90702086 -29582226 + CT-rich Low_complexity Low_complexity 3 55 0 2 1277 680 316 69 19 chr13 90702086 90702448 -29581864 - Lx8 LINE L1 -45 7428 7049 2 1277 826 307 31 7 chr13 90702475 90702764 -29581548 + Lx8 LINE L1 6728 7023 -450 2 1277 933 281 91 61 chr13 90702831 90702941 -29581371 + L1MA5A LINE L1 5388 5491 -809 2 1277 424 282 18 18 chr13 90702941 90703053 -29581259 + PB1D10 SINE Alu 1 112 -5 2 1277 1041 261 121 11 chr13 90703053 90703471 -29580841 + L1MA5A LINE L1 5477 5932 -365 2 1277 5678 66 4 0 chr13 90703482 90704209 -29580103 - L1_Mus2 LINE L1 0 6566 5837 2 1277 3244 98 7 4 chr13 90704209 90704672 -29579640 + L1_Mm LINE L1 4738 5201 -682 2 1277 273 162 54 0 chr13 90704896 90704970 -29579342 - Lx9 LINE L1 -4 7640 7563 2 1277 1045 328 86 30 chr13 90704988 90705513 -29578799 - Lx8 LINE L1 -146 7327 6774 2 1277 1323 276 93 46 chr13 90705518 90705957 -29578355 - Lx8 LINE L1 -802 6671 6189 2 1277 486 0 0 0 chr13 90705957 90706011 -29578301 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1277 1323 276 93 46 chr13 90706011 90706088 -29578224 - Lx8 LINE L1 -1285 6188 6131 2 1277 432 319 122 3 chr13 90706224 90706535 -29577777 + L1MCc LINE L1 1116 1463 -4960 2 1277 319 283 83 8 chr13 90706560 90706681 -29577631 + L1MCc LINE L1 1574 1703 -5425 2 1277 228 35 0 0 chr13 90707206 90707235 -29577077 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1277 231 284 69 0 chr13 90707238 90707354 -29576958 + L1MCc LINE L1 2203 2326 -4802 2 1277 1321 119 0 0 chr13 90707360 90707561 -29576751 - Lx2 LINE L1 -6 6991 6791 2 1277 523 49 37 0 chr13 90707589 90707671 -29576641 - L1Md_F3 LINE L1 0 6584 6500 2 1277 267 236 14 14 chr13 90707677 90707750 -29576562 + L1MCc LINE L1 2403 2475 -4547 2 1277 303 28 0 0 chr13 90708044 90708080 -29576232 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 1277 790 256 24 66 chr13 90708215 90708550 -29575762 - L1_Rod LINE L1 -2498 3349 3029 2 1277 25 65 0 0 chr13 90709492 90709538 -29574774 + AT_rich Low_complexity Low_complexity 1 46 0 2 1277 1095 203 84 2 chr13 90711683 90711930 -29572382 + Lx3C LINE L1 6704 6994 -14 2 1277 245 27 0 51 chr13 90711958 90711997 -29572315 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 2 1277 2590 148 97 2 chr13 90711997 90712450 -29571862 - RLTR21 LTR ERVK -1076 496 1 2 1277 25 31 0 0 chr13 90712451 90712483 -29571829 + AT_rich Low_complexity Low_complexity 1 32 0 2 1277 803 265 10 21 chr13 90712530 90712723 -29571589 - B3 SINE B2 -24 192 2 2 1277 293 231 10 117 chr13 90712782 90712885 -29571427 - MLT1A1 LTR MaLR -3 405 314 2 1277 462 315 71 81 chr13 90713305 90713502 -29570810 - B3 SINE B2 -21 195 1 2 1277 227 161 17 35 chr13 90714106 90714187 -29570125 + (TTTG)n Simple_repeat Simple_repeat 1 79 0 2 1277 1110 62 21 0 chr13 90714189 90714333 -29569979 - B1_Mus2 SINE Alu 0 147 1 2 1277 980 215 34 17 chr13 90714402 90714639 -29569673 - Lx2 LINE L1 -6 6994 6754 2 1277 302 247 11 53 chr13 90715251 90715345 -29568967 - MIR SINE MIR -63 199 110 2 1277 765 253 32 0 chr13 90716190 90716348 -29567964 - B3A SINE B2 -28 170 8 2 1277 1208 207 71 19 chr13 90716396 90716721 -29567591 + Lx7 LINE L1 7352 7693 -3 2 1277 1528 135 37 32 chr13 90716721 90717016 -29567296 - Lx2 LINE L1 -2 6995 6737 2 1277 5017 111 36 0 chr13 90717018 90717760 -29566552 + Lx2 LINE L1 5863 6631 -366 2 1277 24 0 0 0 chr13 90720265 90720289 -29564023 + AT_rich Low_complexity Low_complexity 1 24 0 2 1277 285 51 0 0 chr13 90721006 90721045 -29563267 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1277 327 25 0 0 chr13 90721415 90721455 -29562857 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1277 198 0 0 0 chr13 90721593 90721615 -29562697 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1277 1152 275 120 20 chr13 90722433 90722926 -29561386 - Lx8 LINE L1 -175 7298 6757 2 1277 629 235 221 12 chr13 90723406 90723660 -29560652 - Lx8 LINE L1 -717 6756 6450 2 1277 202 51 0 71 chr13 90723680 90723722 -29560590 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 2 1277 392 339 22 22 chr13 90725201 90725385 -29558927 - Lx8 LINE L1 -866 6607 6424 2 1277 234 359 93 75 chr13 90725706 90725932 -29558380 - LTR78 LTR ERV1 -934 370 141 2 1277 181 139 47 0 chr13 90726932 90726975 -29557337 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 3 1277 216 0 0 0 chr13 90727017 90727041 -29557271 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1277 475 90 26 0 chr13 90727042 90727120 -29557192 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 1277 550 316 15 5 chr13 90727667 90727864 -29556448 + B3 SINE B2 1 199 -17 3 1277 4203 131 22 18 chr13 90727904 90728588 -29555724 - Lx4A LINE L1 0 7058 6372 3 1277 3265 87 22 2 chr13 90728586 90729045 -29555267 - L1_Mus4 LINE L1 -2 6634 6167 3 1277 439 106 0 0 chr13 90729047 90729113 -29555199 - Lx4A LINE L1 -679 6379 6314 3 1277 189 351 13 13 chr13 90729149 90729227 -29555085 + L2b LINE L2 3298 3375 0 3 1277 567 335 46 9 chr13 90730190 90730407 -29553905 + L2 LINE L2 2273 2497 -922 3 1277 342 183 0 0 chr13 90730848 90730919 -29553393 + (TA)n Simple_repeat Simple_repeat 2 72 0 3 1277 212 354 12 0 chr13 90732238 90732320 -29551992 + MIR SINE MIR 63 145 -63 3 1277 4492 141 4 7 chr13 90732321 90733069 -29551243 + L1VL4 LINE L1 23 768 -5534 3 1277 33667 33 3 0 chr13 90733069 90738519 -29545793 + L1Md_T LINE L1 26 5589 -297 3 1277 8911 11 0 0 chr13 90738519 90739515 -29544797 + L1Md_T LINE L1 5590 6585 0 3 1277 17997 154 14 24 chr13 90739549 90740777 -29543535 + MusHAL1 LINE L1 1109 2364 -3522 3 1277 4932 41 0 0 chr13 90740777 90741364 -29542948 + L1Md_T LINE L1 5995 6581 -1 3 1277 17997 175 18 26 chr13 90741364 90743806 -29540506 + MusHAL1 LINE L1 2365 4734 -1152 3 1277 284 0 28 0 chr13 90743806 90743842 -29540470 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 3 1277 17997 175 18 26 chr13 90743842 90744213 -29540099 + MusHAL1 LINE L1 4735 5115 -771 3 1277 34433 34 6 9 chr13 90744213 90749395 -29534917 + L1Md_T LINE L1 423 5585 -298 3 1277 8592 25 1 0 chr13 90749396 90750391 -29533921 + L1Md_T LINE L1 5587 6582 0 3 1277 2694 145 4 16 chr13 90750392 90750877 -29533435 + MusHAL1 LINE L1 5095 5573 -304 3 1277 1888 173 11 16 chr13 90750894 90751264 -29533048 + Lx LINE L1 6287 6654 0 3 1277 2901 228 104 6 chr13 90751582 90752363 -29531949 + Lx7 LINE L1 6557 7413 -283 3 1277 396 40 0 0 chr13 90752374 90752424 -29531888 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1277 355 198 0 11 chr13 90752521 90752608 -29531704 + Lx7 LINE L1 7611 7696 0 3 1277 217 174 22 0 chr13 90753346 90753392 -29530920 - B4 SINE B4 -245 47 1 3 1277 398 343 167 0 chr13 90753397 90753607 -29530705 + L1M4c LINE L1 1003 1247 -5137 3 1277 1641 174 101 68 chr13 90754858 90755315 -29528997 - Lx9 LINE L1 -7 7637 7166 3 1277 17693 164 35 83 chr13 90755532 90758066 -29526246 + Lx2B LINE L1 1720 4330 -1556 3 1277 1109 181 127 46 chr13 90758066 90758373 -29525939 + IAPEY3_LTR LTR ERVK 1 332 0 3 1277 17693 164 35 83 chr13 90758373 90759106 -29525206 + Lx2B LINE L1 4331 4964 -922 3 1277 1116 89 0 0 chr13 90759106 90759252 -29525060 + B1_Mus1 SINE Alu 2 147 -1 3 1277 17693 164 27 50 chr13 90759252 90760624 -29523688 + Lx2B LINE L1 4965 6158 -842 3 1277 2285 89 6 0 chr13 90760644 90760960 -29523352 - ORR1A2 LTR MaLR -8 319 2 3 1277 2507 236 65 41 chr13 90760960 90761757 -29522555 + Lx2B LINE L1 6159 6974 -2 3 1277 386 258 73 24 chr13 90762204 90762327 -29521985 + MTEa LTR MaLR 251 379 0 3 1277 247 266 36 60 chr13 90762837 90762921 -29521391 - MTB LTR MaLR -258 142 61 3 1277 594 0 0 0 chr13 90763007 90763073 -29521239 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1277 572 298 47 12 chr13 90763374 90763544 -29520768 + B4A SINE B4 1 176 -116 3 1277 567 0 0 0 chr13 90763569 90763632 -29520680 + (CA)n Simple_repeat Simple_repeat 1 63 0 3 1277 309 252 93 16 chr13 90764009 90764138 -29520174 - L1MD LINE L1 -2947 3199 3061 3 1277 4312 157 72 42 chr13 90764587 90765516 -29518796 - RMER17B LTR ERVK 0 958 2 3 1277 7228 65 16 0 chr13 90765630 90766837 -29517475 - L1_Mus1 LINE L1 0 6567 5361 3 1277 15095 106 2 7 chr13 90766838 90769205 -29515107 + L1_Mus1 LINE L1 3044 5399 -484 3 1277 1351 224 188 86 chr13 90770428 90770907 -29513405 - MT2A LTR ERVL -4 529 2 3 1277 468 62 0 0 chr13 90771259 90771323 -29512989 + (GA)n Simple_repeat Simple_repeat 1 64 0 3 1277 474 285 123 61 chr13 90771364 90771592 -29512720 - B4A SINE B4 -50 242 1 3 1277 402 296 138 11 chr13 90772157 90772331 -29511981 - B3A SINE B2 -2 196 1 3 1277 215 330 82 48 chr13 90773398 90773602 -29510710 - L2c LINE L2 0 3426 3196 3 1277 321 197 0 0 chr13 90773602 90773673 -29510639 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1277 1090 117 0 11 chr13 90774440 90774621 -29509691 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 3 1277 215 162 49 24 chr13 90774621 90774698 -29509614 + GA-rich Low_complexity Low_complexity 4 82 0 3 1277 1290 191 19 4 chr13 90775354 90775605 -29508707 + RMER4B LTR ERVK 17 271 -314 3 1277 216 0 0 0 chr13 90775605 90775629 -29508683 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 3 1277 1290 191 19 4 chr13 90775629 90775640 -29508672 + RMER4B LTR ERVK 272 282 -303 3 1277 881 196 198 30 chr13 90775956 90776188 -29508124 + RMER4B LTR ERVK 305 575 -10 3 1277 522 293 141 0 chr13 90776200 90776442 -29507870 + MER2 DNA MER2_type 54 329 -16 3 1277 4542 123 14 68 chr13 90776707 90777195 -29507117 - RMER17D2 LTR ERVK 0 809 331 3 1277 1234 69 6 6 chr13 90777195 90777370 -29506942 + (GGAGA)n Simple_repeat Simple_repeat 1 175 0 3 1277 4542 123 14 68 chr13 90777370 90777736 -29506576 - RMER17D2 LTR ERVK -479 330 1 3 1277 349 312 60 33 chr13 90778697 90778879 -29505433 - LTR83 LTR ERVL -3 777 591 3 1277 407 378 57 18 chr13 90778890 90779119 -29505193 - LTR83 LTR ERVL -318 462 225 3 1277 468 51 0 0 chr13 90779652 90779711 -29504601 + (GAAAA)n Simple_repeat Simple_repeat 2 60 0 3 1277 324 120 0 0 chr13 90779857 90779907 -29504405 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1277 1137 116 0 0 chr13 90779907 90780080 -29504232 + (TG)n Simple_repeat Simple_repeat 2 174 0 3 1277 2879 301 71 24 chr13 90780130 90780605 -29503707 - Lx8 LINE L1 -106 7367 6860 3 1277 189 0 0 0 chr13 90780605 90780626 -29503686 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1277 2879 301 71 24 chr13 90780626 90781374 -29502938 - Lx8 LINE L1 -614 6859 6088 3 1277 459 92 0 0 chr13 90782291 90782356 -29501956 + (TC)n Simple_repeat Simple_repeat 1 65 0 3 1277 22 70 0 0 chr13 90783124 90783167 -29501145 + AT_rich Low_complexity Low_complexity 1 43 0 3 1277 294 323 92 39 chr13 90783320 90783541 -29500771 + MIRb SINE MIR 24 252 -10 3 1277 23 0 0 0 chr13 90783890 90783913 -29500399 + AT_rich Low_complexity Low_complexity 1 23 0 3 1277 480 48 0 0 chr13 90783923 90783986 -29500326 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1277 377 292 133 0 chr13 90785131 90785251 -29499061 - MamRep137 DNA TcMar? -166 278 143 3 1277 222 218 0 0 chr13 90785775 90785830 -29498482 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 3 1277 1915 201 69 73 chr13 90787599 90788162 -29496150 + RLTR31_Mm LTR ERVK 1 561 0 3 1277 792 205 97 87 chr13 90788162 90788461 -29495851 + RMER3D-int LTR ERVK 1 302 -2540 3 1277 901 97 26 9 chr13 90788472 90788606 -29495706 - B1_Mm SINE Alu -6 141 28 3 1277 647 201 13 60 chr13 90788615 90788848 -29495464 + RMER3D-int LTR ERVK 630 851 -1991 3 1277 5079 168 63 61 chr13 90788858 90790213 -29494099 + RMER3D-int LTR ERVK 450 2325 -517 3 1277 237 280 110 99 chr13 90790216 90790307 -29494005 + RLTR17 LTR ERVK 601 692 0 3 1277 1503 232 66 6 chr13 90790487 90790834 -29493478 - ORR1D1 LTR MaLR -4 370 3 3 1277 420 266 65 15 chr13 90790837 90790982 -29493330 - B3A SINE B2 -40 176 1 3 1277 357 270 33 99 chr13 90791415 90791567 -29492745 + MTD LTR MaLR 41 182 -237 3 1277 201 147 0 0 chr13 90791640 90791674 -29492638 + (A)n Simple_repeat Simple_repeat 1 34 0 3 1277 244 271 22 22 chr13 90791877 90791975 -29492337 - MIRm SINE MIR -74 188 91 3 1277 616 296 80 11 chr13 90792168 90792196 -29492116 - B3 SINE B2 -15 201 175 3 1277 1057 234 111 23 chr13 90792196 90792384 -29491928 - ORR1D1 LTR MaLR 0 374 165 3 1277 546 67 0 0 chr13 90792384 90792459 -29491853 + (GA)n Simple_repeat Simple_repeat 2 76 0 3 1277 1057 234 111 23 chr13 90792459 90792612 -29491700 - ORR1D1 LTR MaLR -210 164 4 3 1277 616 296 80 11 chr13 90792612 90792771 -29491541 - B3 SINE B2 -42 174 1 3 1277 24 0 0 0 chr13 90794369 90794393 -29489919 + AT_rich Low_complexity Low_complexity 1 24 0 3 1277 891 259 126 7 chr13 90794410 90794848 -29489464 - Lx8 LINE L1 -1091 5052 4515 3 1277 831 312 39 136 chr13 90794834 90795227 -29489085 + Lx8 LINE L1 5049 5456 -424 3 1277 533 271 58 23 chr13 90795227 90795401 -29488911 + B3A SINE B2 3 182 -16 3 1277 2256 298 57 51 chr13 90795401 90796881 -29487431 + Lx8 LINE L1 5429 6863 -610 3 1277 971 254 174 22 chr13 90796912 90797279 -29487033 + Lx8 LINE L1 7049 7471 -2 3 1277 421 343 14 7 chr13 90797916 90798060 -29486252 + MTE2b LTR MaLR 2 146 -233 3 1277 1231 189 44 47 chr13 90798144 90798504 -29485808 - MYSERV16_I-int LTR ERVK -446 1880 1522 3 1277 25 51 0 0 chr13 90800335 90800374 -29483938 + AT_rich Low_complexity Low_complexity 1 39 0 3 1277 274 293 29 39 chr13 90801143 90801246 -29483066 - MER57D LTR ERV1 -4 407 306 3 1277 285 128 0 0 chr13 90801395 90801442 -29482870 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1277 393 308 0 19 chr13 90801450 90801612 -29482700 + CT-rich Low_complexity Low_complexity 4 162 0 3 1277 198 103 0 0 chr13 90801615 90801644 -29482668 + (TCC)n Simple_repeat Simple_repeat 1 29 0 3 1277 21 0 0 0 chr13 90802500 90802521 -29481791 + AT_rich Low_complexity Low_complexity 1 21 0 3 1277 484 173 0 0 chr13 90802689 90802770 -29481542 - 4.5SRNA scRNA scRNA -2 92 12 3 1277 2141 71 7 20 chr13 90802770 90803073 -29481239 + L1_Mus2 LINE L1 6268 6566 0 3 1277 36895 5 0 0 chr13 90803084 90808664 -29475648 + L1Md_A LINE L1 7 5586 -297 3 1277 9018 5 0 0 chr13 90808664 90809660 -29474652 + L1Md_A LINE L1 5587 6582 0 3 1277 481 307 25 56 chr13 90809887 90810049 -29474263 + RSINE1 SINE B4 3 159 -6 3 1277 207 25 24 48 chr13 90810050 90810092 -29474220 + (TAAA)n Simple_repeat Simple_repeat 3 43 0 3 1277 268 311 69 75 chr13 90811574 90811734 -29472578 - MLT2D LTR ERVL -20 540 382 3 1277 267 320 108 92 chr13 90813818 90814134 -29470178 + LTR79 LTR ERVL 100 420 -107 3 1277 207 307 38 38 chr13 90814171 90814276 -29470036 - MIR SINE MIR -75 187 83 3 1277 2056 245 11 57 chr13 90814481 90814607 -29469705 + Lx6 LINE L1 6912 7032 -428 3 1277 1226 41 7 0 chr13 90814607 90814753 -29469559 + B1_Mm SINE Alu 1 147 0 3 1277 2056 245 11 57 chr13 90814753 90815188 -29469124 + Lx6 LINE L1 7033 7447 -13 3 1277 241 321 67 30 chr13 90815443 90815578 -29468734 + LTR82A LTR ERVL 23 162 -710 3 1277 365 294 58 3 chr13 90816210 90816350 -29467962 - MLT2B1 LTR ERVL -65 502 347 3 1277 263 360 71 7 chr13 90816695 90816835 -29467477 + RMER15 LTR ERVL 427 575 0 3 1277 310 299 9 36 chr13 90816837 90816948 -29467364 - MLT1A1 LTR MaLR -10 398 291 3 1277 330 278 60 0 chr13 90817672 90817823 -29466489 + Arthur1B DNA Tip100 917 1076 -149 3 1277 271 336 15 30 chr13 90817818 90817953 -29466359 + RMER12 LTR ERVK 711 843 -479 3 1277 405 0 0 0 chr13 90818254 90818299 -29466013 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1277 524 244 100 120 chr13 90820257 90820457 -29463855 - B3A SINE B2 0 198 3 4 1277 288 161 108 0 chr13 90820548 90820641 -29463671 - Tigger7 DNA MER2_type -118 2373 2271 4 1277 477 376 166 48 chr13 90820903 90821289 -29463023 - LTR16A LTR ERVL -5 446 15 4 1277 605 328 128 34 chr13 90821292 90821720 -29462592 - L1MEe LINE L1 -3723 1131 654 4 1277 1248 214 150 86 chr13 90821720 90822253 -29462059 + RMER2 LTR ERV1 1 567 0 4 1277 605 328 128 34 chr13 90822253 90822448 -29461864 - L1MEe LINE L1 -4201 653 451 4 1277 204 67 0 0 chr13 90822949 90822979 -29461333 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1277 864 281 62 34 chr13 90823121 90823732 -29460580 + L1MA6 LINE L1 5230 5867 -433 4 1277 253 282 52 37 chr13 90823886 90824022 -29460290 + L1MA6 LINE L1 6139 6276 -24 4 1277 2718 40 0 3 chr13 90824390 90824718 -29459594 - L1_Mus1 LINE L1 0 6567 6241 4 1277 219 69 0 0 chr13 90825846 90825875 -29458437 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1277 31 26 0 0 chr13 90827775 90827813 -29456499 + AT_rich Low_complexity Low_complexity 1 38 0 4 1277 2106 132 97 8 chr13 90828147 90828499 -29455813 + RLTR9A2 LTR ERVK 1 383 0 4 1277 4187 272 28 26 chr13 90828501 90830006 -29454306 + ETnERV-int LTR ERVK 4 1576 -1738 4 1277 2894 284 75 27 chr13 90830032 90831700 -29452612 + ETnERV-int LTR ERVK 1741 4277 -3129 4 1277 421 207 31 167 chr13 90831702 90831864 -29452448 + L1VL1 LINE L1 214 353 -6069 4 1277 429 236 16 8 chr13 90831949 90832077 -29452235 + L1Md_F LINE L1 578 706 -5813 4 159 2547 155 1 47 chr13 90832085 90832971 -29451341 + L1Md_F LINE L1 628 1468 -2349 4 1278 8181 92 33 12 chr13 90832976 90834263 -29450049 + L1_Mm LINE L1 3780 5094 -789 4 1278 5656 75 1 1 chr13 90834263 90835008 -29449304 + L1_Mus1 LINE L1 5823 6567 0 4 1278 11495 177 16 18 chr13 90835008 90837213 -29447099 + ETnERV2-int LTR ERVK 3510 6425 -981 4 1278 2174 168 16 8 chr13 90837499 90837877 -29446435 + RLTR9A2 LTR ERVK 3 383 0 4 1278 4024 97 3 2 chr13 90838099 90838690 -29445622 + Lx3_Mus LINE L1 6334 6925 -84 4 1278 385 315 91 20 chr13 90839207 90839407 -29444905 + L2b LINE L2 3194 3386 -1 4 1278 308 322 65 82 chr13 90840251 90840607 -29443705 + MLT1B LTR MaLR 26 376 -14 4 1278 373 284 28 38 chr13 90840816 90840922 -29443390 - PB1D10 SINE Alu -28 121 17 4 1278 25 31 0 0 chr13 90841002 90841034 -29443278 + AT_rich Low_complexity Low_complexity 1 32 0 4 1278 1596 248 44 105 chr13 90841489 90842040 -29442272 + RMER19C LTR ERVK 69 585 -26 4 1278 220 338 0 36 chr13 90842065 90842148 -29442164 + B3 SINE B2 6 85 -131 4 1278 659 228 49 0 chr13 90842074 90842197 -29442115 + RSINE1 SINE B4 8 136 -29 4 1278 2752 94 26 2 chr13 90842509 90842926 -29441386 - Lx3_Mus LINE L1 -424 6585 6159 4 1278 2931 112 0 0 chr13 90842927 90843338 -29440974 + Lx3_Mus LINE L1 6599 7009 0 4 1278 31 58 0 0 chr13 90843338 90843390 -29440922 + AT_rich Low_complexity Low_complexity 1 52 0 4 1278 1113 97 0 0 chr13 90843526 90843670 -29440642 + B1_Mus1 SINE Alu 3 146 -2 4 1278 201 74 0 0 chr13 90843676 90843703 -29440609 + (GGA)n Simple_repeat Simple_repeat 2 28 0 4 1278 183 250 74 62 chr13 90843845 90843926 -29440386 - MIR SINE MIR -58 150 69 4 1278 21 0 0 0 chr13 90844039 90844060 -29440252 + AT_rich Low_complexity Low_complexity 1 21 0 4 1278 441 0 0 0 chr13 90844175 90844224 -29440088 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1278 189 61 0 109 chr13 90846070 90846125 -29438187 + (TATAA)n Simple_repeat Simple_repeat 1 49 0 4 1278 5015 211 75 19 chr13 90846201 90848461 -29435851 + Lx7 LINE L1 4852 7252 -444 4 1278 4126 100 1 80 chr13 90848478 90849151 -29435161 - L1_Mus4 LINE L1 -11 6625 6006 4 1278 2280 65 40 0 chr13 90849151 90849475 -29434837 + L1_Mus4 LINE L1 5678 6014 -624 4 1278 493 231 8 8 chr13 90849477 90849608 -29434704 + Lx7 LINE L1 7566 7696 0 4 1278 203 61 30 0 chr13 90849932 90849965 -29434347 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1278 24 0 0 0 chr13 90850381 90850405 -29433907 + AT_rich Low_complexity Low_complexity 1 24 0 4 1278 205 346 18 73 chr13 90850483 90850592 -29433720 - L2 LINE L2 -660 2759 2657 4 1278 187 152 62 42 chr13 90850668 90850716 -29433596 - L2b LINE L2 -1 3374 3326 4 1278 349 219 167 0 chr13 90852450 90852546 -29431766 + LFSINE_Vert SINE SINE 58 169 -290 4 1278 1404 75 42 9 chr13 90852913 90853129 -29431183 - L1_Mus3 LINE L1 -5 6633 6411 4 1278 27 49 0 0 chr13 90853136 90853177 -29431135 + AT_rich Low_complexity Low_complexity 1 41 0 4 1278 505 368 14 0 chr13 90853182 90853326 -29430986 - RSINE1 SINE B4 -14 151 6 4 1278 432 67 0 0 chr13 90853571 90853631 -29430681 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1278 206 224 0 39 chr13 90853635 90853686 -29430626 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 4 1278 327 212 25 12 chr13 90853969 90854050 -29430262 - Tigger12c DNA MER2_type -145 589 508 4 1278 2779 58 0 23 chr13 90854676 90855063 -29429249 + L1_Mus2 LINE L1 5646 6023 -543 4 1278 7418 13 0 0 chr13 90855063 90855897 -29428415 + L1Md_A LINE L1 5748 6581 -1 4 1278 4345 56 2 41 chr13 90855882 90856462 -29427850 + L1_Mus2 LINE L1 5998 6554 -12 4 1278 333 0 0 0 chr13 90856776 90856813 -29427499 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1278 223 339 104 52 chr13 90856862 90856996 -29427316 - RSINE1 SINE B4 -19 146 6 4 1278 540 213 0 0 chr13 90857027 90857149 -29427163 + GA-rich Low_complexity Low_complexity 2 123 0 4 1278 1100 124 0 6 chr13 90857132 90857224 -29427088 + (GGAA)n Simple_repeat Simple_repeat 1 92 0 4 1278 1147 100 0 16 chr13 90857224 90857407 -29426905 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1278 1100 124 0 6 chr13 90857407 90857493 -29426819 + (GGAA)n Simple_repeat Simple_repeat 1 86 0 4 1278 407 244 5 0 chr13 90857458 90857666 -29426646 + GA-rich Low_complexity Low_complexity 1 208 0 4 1278 990 270 101 68 chr13 90857666 90857992 -29426320 - MTEa LTR MaLR -42 337 1 4 1278 399 182 0 33 chr13 90858382 90858473 -29425839 - L1M5 LINE L1 -2629 3517 3430 4 1278 180 0 0 0 chr13 90859165 90859185 -29425127 + (CAGCC)n Simple_repeat Simple_repeat 4 23 0 4 1278 414 190 0 25 chr13 90859332 90859413 -29424899 - ID4_ SINE ID -4 79 1 4 1278 206 333 0 0 chr13 90860923 90860986 -29423326 + L2a LINE L2 3359 3421 -5 4 1278 467 314 32 42 chr13 90861966 90862182 -29422130 - MIR SINE MIR -43 219 6 4 1278 207 0 0 0 chr13 90862964 90862987 -29421325 + (CA)n Simple_repeat Simple_repeat 1 23 0 4 1278 426 136 0 0 chr13 90863049 90863130 -29421182 + (CA)n Simple_repeat Simple_repeat 1 81 0 4 1278 188 284 136 0 chr13 90864796 90864877 -29419435 + L2 LINE L2 2266 2357 -1062 4 1278 451 298 30 0 chr13 90864877 90865008 -29419304 - FordPrefect_a DNA Tip100 0 508 374 4 1278 333 0 0 0 chr13 90868086 90868123 -29416189 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1278 1173 113 26 26 chr13 90868183 90868374 -29415938 + B2_Mm2 SINE B2 5 195 0 4 1278 315 0 0 0 chr13 90868423 90868458 -29415854 + (A)n Simple_repeat Simple_repeat 1 35 0 4 1278 220 143 0 23 chr13 90868597 90868640 -29415672 + T-rich Low_complexity Low_complexity 1 42 0 4 1278 1729 220 15 15 chr13 90868804 90869214 -29415098 + L1VL4 LINE L1 363 772 -5530 4 1278 9858 106 12 3 chr13 90869210 90871633 -29412679 + L1_Mus3 LINE L1 4193 6638 0 4 1278 407 290 13 98 chr13 90871644 90871797 -29412515 + ID_B1 SINE B4 82 221 -3 4 1278 365 58 19 0 chr13 90871798 90871850 -29412462 + (GA)n Simple_repeat Simple_repeat 2 54 0 4 1278 1382 226 15 12 chr13 90872044 90872375 -29411937 - Lx9 LINE L1 -227 7417 7086 4 1278 397 169 39 46 chr13 90872441 90872571 -29411741 + Lx9 LINE L1 7506 7634 -10 4 1278 711 235 151 18 chr13 90872704 90872790 -29411522 + ORR1D1 LTR MaLR 75 180 -194 4 1278 735 12 0 0 chr13 90872790 90872874 -29411438 + (TC)n Simple_repeat Simple_repeat 1 84 0 4 1278 711 235 151 18 chr13 90872874 90873012 -29411300 + ORR1D1 LTR MaLR 181 329 -45 4 1278 1588 191 74 19 chr13 90873012 90873376 -29410936 + ORR1C2 LTR MaLR 1 384 0 4 1278 718 212 152 86 chr13 90873376 90873614 -29410698 + ORR1D1 LTR MaLR 115 368 -6 4 1278 4302 227 58 78 chr13 90873658 90874887 -29409425 + MTC-int LTR MaLR 45 1248 -10 4 1278 1267 225 47 4 chr13 90874896 90875172 -29409140 + MTC LTR MaLR 3 290 -131 4 1278 2062 259 16 16 chr13 90875178 90875677 -29408635 + RLTR16 LTR ERVK 7 505 0 4 1278 556 227 9 0 chr13 90875677 90875787 -29408525 + MTC LTR MaLR 299 409 -10 4 1278 259 336 35 28 chr13 90875957 90876098 -29408214 - Lx8 LINE L1 -813 6660 6519 4 1278 276 330 28 28 chr13 90876446 90876552 -29407760 + PB1D7 SINE Alu 9 114 -6 4 1278 1706 195 59 30 chr13 90877268 90877608 -29406704 - MTD LTR MaLR 0 419 76 4 1278 450 0 0 0 chr13 90877608 90877658 -29406654 + (TTTTG)n Simple_repeat Simple_repeat 3 52 0 4 1278 1706 195 59 30 chr13 90877658 90877724 -29406588 - MTD LTR MaLR -344 75 3 4 1278 312 311 130 52 chr13 90878068 90878299 -29406013 - ORR1E LTR MaLR -108 251 3 4 1278 452 303 91 9 chr13 90878304 90878489 -29405823 + MLT2D LTR ERVL 177 373 -41 4 1278 450 0 0 0 chr13 90878489 90878539 -29405773 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1278 452 303 91 9 chr13 90878539 90878573 -29405739 + MLT2D LTR ERVL 374 413 -1 4 1278 331 327 69 53 chr13 90878895 90879157 -29405155 + L1MD LINE L1 2162 2427 -3719 4 1278 282 244 0 0 chr13 90880286 90880368 -29403944 + GA-rich Low_complexity Low_complexity 3 84 0 4 1278 526 233 136 0 chr13 90880489 90880592 -29403720 + ID_B1 SINE B4 92 208 -16 4 1278 355 268 39 13 chr13 90880594 90880749 -29403563 + GA-rich Low_complexity Low_complexity 4 162 0 4 1278 216 345 54 59 chr13 90880963 90881011 -29403301 - B3 SINE B2 -9 207 6 4 1278 637 273 71 7 chr13 90881011 90881166 -29403146 - B4 SINE B4 -122 170 6 4 1278 413 101 0 37 chr13 90881238 90881320 -29402992 + (T)n Simple_repeat Simple_repeat 1 79 0 4 1278 1647 31 0 0 chr13 90881322 90881513 -29402799 - B2_Mm1t SINE B2 -1 192 2 4 1278 371 56 19 0 chr13 90881747 90881801 -29402511 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1278 573 274 43 68 chr13 90881801 90882036 -29402276 - Lx7 LINE L1 -403 7293 7065 4 1278 276 285 82 76 chr13 90883112 90883283 -29401029 + RMER12 LTR ERVK 685 856 -466 4 1278 791 248 30 25 chr13 90883318 90883521 -29400791 - ID_B1 SINE B4 -18 206 3 4 1278 468 0 0 0 chr13 90883618 90883670 -29400642 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1278 642 286 0 0 chr13 90883744 90883891 -29400421 - B1_Mur1 SINE Alu -1 148 2 5 1278 402 308 67 0 chr13 90884232 90884352 -29399960 - ID_B1 SINE B4 -91 133 6 5 1278 961 114 86 20 chr13 90884386 90884538 -29399774 + B2_Mm2 SINE B2 1 162 -33 5 1278 189 0 0 0 chr13 90885600 90885621 -29398691 + (TA)n Simple_repeat Simple_repeat 2 22 0 5 1278 333 0 0 0 chr13 90885621 90885657 -29398655 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1278 595 0 27 0 chr13 90885684 90885759 -29398553 + (GA)n Simple_repeat Simple_repeat 2 78 0 5 1278 1904 207 65 63 chr13 90887019 90887602 -29396710 + RLTR31A_Mm LTR ERVK 1 584 0 5 1278 1107 211 9 0 chr13 90887956 90888179 -29396133 + URR1B DNA MER1_type 1 225 0 5 1278 801 301 62 7 chr13 90888323 90888597 -29395715 - MLT1B LTR MaLR -19 371 83 5 1278 458 308 147 60 chr13 90888599 90888851 -29395461 + B4 SINE B4 1 274 -18 5 1278 384 22 0 0 chr13 90888932 90888977 -29395335 + (GA)n Simple_repeat Simple_repeat 2 46 0 5 1278 349 285 80 58 chr13 90890064 90890202 -29394110 - LTR40c LTR ERVL 0 465 325 5 1278 678 305 40 5 chr13 90890314 90890512 -29393800 + MLT1B LTR MaLR 30 234 -156 5 1278 250 304 145 0 chr13 90890644 90890713 -29393599 - LTR40c LTR ERVL -259 260 182 5 1278 8854 136 25 9 chr13 90890713 90893412 -29390900 - Lx2 LINE L1 -3 6994 4248 5 1278 361 353 8 8 chr13 90893412 90893546 -29390766 - LTR40c LTR ERVL -326 139 6 5 1278 470 346 143 13 chr13 90893991 90894228 -29390084 + MER45C DNA Tip100 1 268 -685 5 1278 282 336 113 15 chr13 90894527 90894660 -29389652 + MLT2F LTR ERVL 57 202 -461 5 1278 313 315 141 22 chr13 90894673 90894785 -29389527 + MLT2F LTR ERVL 249 367 -296 5 1278 396 0 0 0 chr13 90894785 90894829 -29389483 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1278 313 315 141 22 chr13 90894829 90894901 -29389411 + MLT2F LTR ERVL 368 455 -208 5 1278 291 281 0 0 chr13 90895083 90895147 -29389165 - RSINE1 SINE B4 -96 69 6 5 1278 7496 149 37 31 chr13 90895619 90896950 -29387362 + Lx2B LINE L1 5494 6805 -195 5 1278 1663 180 179 52 chr13 90896950 90897294 -29387018 + RLTR31_Mm LTR ERVK 1 423 -138 5 1278 645 14 0 0 chr13 90897294 90897368 -29386944 + (GA)n Simple_repeat Simple_repeat 1 74 0 5 1278 1663 180 179 52 chr13 90897368 90897521 -29386791 + RLTR31_Mm LTR ERVK 424 561 0 5 1278 7496 147 40 34 chr13 90897521 90897575 -29386737 + Lx2B LINE L1 6806 6880 -120 5 1278 186 43 0 0 chr13 90897575 90897598 -29386714 + (TGGG)n Simple_repeat Simple_repeat 1 23 0 5 1278 7496 147 40 34 chr13 90897598 90897707 -29386605 + Lx2B LINE L1 6881 6993 -7 5 1278 374 79 0 16 chr13 90898499 90898563 -29385749 + (TTG)n Simple_repeat Simple_repeat 2 64 0 5 1278 468 0 0 0 chr13 90899056 90899108 -29385204 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1278 802 264 110 78 chr13 90899667 90899998 -29384314 - MLT1B LTR MaLR -8 382 17 5 1278 180 0 0 0 chr13 90900969 90900989 -29383323 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 5 1278 303 49 0 0 chr13 90901265 90901306 -29383006 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1278 629 265 135 0 chr13 90901334 90901519 -29382793 + MTD LTR MaLR 10 219 -200 5 1278 345 47 0 0 chr13 90901537 90901580 -29382732 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1278 2647 221 11 2 chr13 90902892 90903450 -29380862 - Lx2B LINE L1 -3 6997 6435 5 1278 528 272 91 47 chr13 90903694 90904080 -29380232 + L1M2 LINE L1 4304 4706 -1437 5 1278 3688 136 198 48 chr13 90904103 90904749 -29379563 + L1VL4 LINE L1 37 808 -5494 5 1278 933 35 0 0 chr13 90904749 90904862 -29379450 + (GAA)n Simple_repeat Simple_repeat 2 114 0 5 1278 3688 90 40 14 chr13 90904862 90905071 -29379241 + L1VL4 LINE L1 809 1016 -2543 5 1278 247 186 13 114 chr13 90905072 90905151 -29379161 + RLTR25B LTR ERVK 427 497 -531 5 1278 690 123 0 0 chr13 90905095 90905201 -29379111 + B1_Mus2 SINE Alu 42 147 0 5 1278 308 121 0 33 chr13 90905203 90905263 -29379049 + GA-rich Low_complexity Low_complexity 2 59 0 5 1278 13751 97 20 2 chr13 90905263 90905918 -29378394 + L1_Mm LINE L1 1386 2054 -1860 5 1278 189 0 0 0 chr13 90905918 90905939 -29378373 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 5 1278 13751 98 20 2 chr13 90905939 90907533 -29376779 + L1_Mm LINE L1 2051 3669 -2214 5 1278 3024 72 7 7 chr13 90907533 90907954 -29376358 - BGLII LTR ERVK 0 421 1 5 1278 12285 161 20 16 chr13 90907954 90908245 -29376067 + L1_Mm LINE L1 3670 3935 -1948 5 1278 2113 232 31 37 chr13 90908281 90909004 -29375308 + L1VL4 LINE L1 154 854 -5448 5 1278 243 0 0 0 chr13 90909004 90909031 -29375281 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1278 4595 92 2 0 chr13 90909031 90909762 -29374550 + L1VL4 LINE L1 804 1542 -2017 5 1278 7303 145 17 13 chr13 90909756 90911866 -29372446 + Lx LINE L1 4535 6653 -1 5 1278 524 280 73 48 chr13 90911894 90912183 -29372129 + L1M2 LINE L1 4762 5057 -1086 5 1278 1917 197 49 15 chr13 90912296 90912687 -29371625 - MTB_Mm LTR MaLR -3 404 1 5 1278 379 296 0 81 chr13 90912749 90912885 -29371427 - Lx8 LINE L1 -170 7303 7179 5 1278 2327 127 174 5 chr13 90912892 90913272 -29371040 - RLTR41 LTR ERV1 0 446 3 5 1278 613 288 23 23 chr13 90913376 90913632 -29370680 - RLTR6-int LTR ERV1 -76 7702 7447 5 1278 529 286 46 54 chr13 90913903 90914162 -29370150 - RLTR6-int LTR ERV1 -3189 4589 4333 5 1278 255 303 25 32 chr13 90914395 90914552 -29369760 - MMERGLN-int LTR ERV1 -5129 2427 2272 5 1278 534 287 93 12 chr13 90914623 90915059 -29369253 - L1M2 LINE L1 -659 5515 5051 5 1278 294 196 0 0 chr13 90915053 90915109 -29369203 - Lx8 LINE L1 -1038 6435 6380 5 1278 530 277 73 6 chr13 90915125 90915303 -29369009 + Lx8 LINE L1 6455 6644 -829 5 1278 451 321 115 90 chr13 90915304 90915472 -29368840 - Lx8 LINE L1 -66 7407 7228 5 1278 1164 75 0 0 chr13 90915472 90915619 -29368693 + B1_Mus1 SINE Alu 2 148 0 5 1278 451 321 115 90 chr13 90915619 90915840 -29368472 - Lx8 LINE L1 -246 7227 7008 5 1278 3352 219 64 16 chr13 90916339 90917146 -29367166 + Lx5 LINE L1 6188 7033 -17 5 1278 22 35 0 0 chr13 90917797 90917826 -29366486 + AT_rich Low_complexity Low_complexity 1 29 0 5 1278 482 289 99 28 chr13 90918399 90918652 -29365660 - MARNA DNA Mariner -176 410 140 5 1278 319 338 90 0 chr13 90920604 90920749 -29363563 - L1ME1 LINE L1 -8 6171 6014 5 1278 840 187 0 0 chr13 90921010 90921149 -29363163 + B1_Mus1 SINE Alu 3 141 -7 5 1278 277 282 0 0 chr13 90921149 90921180 -29363132 + polypurine Low_complexity Low_complexity 1 31 0 5 1278 957 151 0 0 chr13 90921180 90921346 -29362966 + GA-rich Low_complexity Low_complexity 3 168 0 5 1278 277 282 0 0 chr13 90921346 90921392 -29362920 + polypurine Low_complexity Low_complexity 32 77 0 5 1278 414 227 20 20 chr13 90923104 90923203 -29361109 - RSINE1 SINE B4 -64 101 3 5 1278 183 204 0 0 chr13 90923872 90923916 -29360396 + (ATTG)n Simple_repeat Simple_repeat 2 45 0 5 1278 379 361 39 62 chr13 90923956 90924216 -29360096 - B4A SINE B4 -12 280 27 5 1278 734 282 18 14 chr13 90924530 90924749 -29359563 - ID_B1 SINE B4 -4 220 1 5 1278 895 239 11 0 chr13 90925305 90925481 -29358831 - B3A SINE B2 -18 180 3 5 1278 6844 45 0 5 chr13 90925709 90926547 -29357765 - L1Md_F2 LINE L1 -12 6570 5737 5 1278 443 282 46 39 chr13 90926548 90926756 -29357556 + ORR1D2 LTR MaLR 1 209 -169 5 1278 335 332 190 4 chr13 90926762 90927004 -29357308 - HAL1 LINE L1 -931 1576 1290 5 1278 3120 162 81 25 chr13 90927096 90927610 -29356702 + RLTR26 LTR ERVK 1 530 -112 5 1278 4895 55 3 28 chr13 90927610 90928259 -29356053 + L1Md_F2 LINE L1 5950 6582 0 5 1278 3120 162 81 25 chr13 90928259 90928352 -29355960 + RLTR26 LTR ERVK 531 641 -1 5 1278 554 305 118 83 chr13 90928465 90928958 -29355354 - Lx8 LINE L1 -34 7439 6930 5 1278 252 0 0 0 chr13 90928990 90929018 -29355294 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1278 27 49 0 0 chr13 90929054 90929095 -29355217 + AT_rich Low_complexity Low_complexity 1 41 0 5 1278 785 246 10 73 chr13 90929233 90929439 -29354873 - B3A SINE B2 -4 194 2 5 1278 257 212 86 57 chr13 90929450 90929520 -29354792 - ID_B1 SINE B4 -7 217 146 5 1278 1795 264 34 52 chr13 90929528 90930371 -29353941 + L1_Rod LINE L1 3798 4625 -1222 5 1278 6845 92 31 10 chr13 90930469 90932260 -29352052 - L1VL2 LINE L1 -1586 2029 195 5 1278 715 158 205 0 chr13 90932334 90932447 -29351865 - Lx9 LINE L1 -2 7642 7491 5 1278 369 0 0 0 chr13 90932447 90932488 -29351824 + (CATA)n Simple_repeat Simple_repeat 3 43 0 5 1278 715 158 205 0 chr13 90932488 90932564 -29351748 - Lx9 LINE L1 -154 7490 7415 5 1278 488 125 125 0 chr13 90933666 90933754 -29350558 - URR1B DNA MER1_type 0 225 127 5 1278 567 0 0 0 chr13 90933947 90934010 -29350302 + (TC)n Simple_repeat Simple_repeat 1 63 0 5 1278 37 39 0 0 chr13 90935839 90935890 -29348422 + AT_rich Low_complexity Low_complexity 1 51 0 5 1278 673 175 0 0 chr13 90935974 90936117 -29348195 + T-rich Low_complexity Low_complexity 2 144 0 5 1278 32 0 0 0 chr13 90938439 90938471 -29345841 + AT_rich Low_complexity Low_complexity 1 32 0 5 1278 735 112 0 0 chr13 90939154 90939270 -29345042 + (TC)n Simple_repeat Simple_repeat 2 117 0 5 1278 385 194 0 14 chr13 90939704 90939777 -29344535 - B1_Mur1 SINE Alu -1 148 77 5 1278 1144 63 7 0 chr13 90939786 90939929 -29344383 + B1_Mus1 SINE Alu 5 148 0 5 1278 769 29 19 0 chr13 90940005 90940109 -29344203 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 5 1278 222 37 0 0 chr13 90940136 90940163 -29344149 + (TA)n Simple_repeat Simple_repeat 2 28 0 5 1278 3369 33 0 8 chr13 90940305 90940704 -29343608 - MTA_Mm LTR MaLR 0 396 1 5 1278 7350 73 36 70 chr13 90940704 90941840 -29342472 - MTA_Mm-int LTR MaLR 0 1098 1 5 1278 348 272 9 37 chr13 90942314 90942421 -29341891 - PB1D10 SINE Alu 0 117 14 5 1278 214 152 43 0 chr13 90942866 90942912 -29341400 + T-rich Low_complexity Low_complexity 3 50 0 5 1278 1271 191 4 0 chr13 90943130 90943392 -29340920 - L1_Mur3 LINE L1 -991 4889 4627 5 1278 360 0 0 0 chr13 90943393 90943433 -29340879 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1278 1103 164 14 14 chr13 90943443 90943653 -29340659 - RMER17D2 LTR ERVK 0 809 600 5 1278 8601 166 47 98 chr13 90943654 90943955 -29340357 - L1_Mur3 LINE L1 -1280 4600 4290 5 1278 207 0 0 0 chr13 90943955 90943978 -29340334 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1278 8601 166 47 98 chr13 90943978 90944192 -29340120 - L1_Mur3 LINE L1 -1591 4289 4071 5 1278 778 0 24 39 chr13 90944192 90944319 -29339993 + (GGAGA)n Simple_repeat Simple_repeat 2 126 0 5 1278 8601 166 47 98 chr13 90944319 90944774 -29339538 - L1_Mur3 LINE L1 -1810 4070 3599 5 1278 5399 45 0 3 chr13 90944774 90945420 -29338892 + L1Md_F2 LINE L1 5937 6580 -2 5 1278 8601 166 47 98 chr13 90945420 90945574 -29338738 - L1_Mur3 LINE L1 -2282 3598 3455 5 1278 414 0 0 0 chr13 90945574 90945620 -29338692 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1278 8601 166 47 98 chr13 90945620 90946212 -29338100 - L1_Mur3 LINE L1 -2426 3454 3015 5 1278 1556 22 49 0 chr13 90946212 90946395 -29337917 + B2_Mm1a SINE B2 2 193 0 6 1278 8601 166 47 98 chr13 90946395 90946908 -29337404 - L1_Mur3 LINE L1 -2866 3014 2483 5 1278 1993 160 14 19 chr13 90946913 90947283 -29337029 - RLTR17 LTR ERVK -324 368 1 6 1278 652 122 0 17 chr13 90947283 90947400 -29336912 - RMER3D-int LTR ERVK 0 2842 2728 6 1278 1651 192 16 3 chr13 90947400 90947719 -29336593 - RLTR17 LTR ERVK -218 474 152 6 1278 6445 170 32 13 chr13 90947719 90948935 -29335377 - L1_Mur3 LINE L1 -3386 2494 1255 5 1278 396 0 0 0 chr13 90948935 90948979 -29335333 + (TTA)n Simple_repeat Simple_repeat 2 45 0 6 1278 6445 173 69 31 chr13 90948979 90949755 -29334557 - L1_Mur3 LINE L1 -6474 1254 447 5 1278 1315 96 112 35 chr13 90949759 90950017 -29334295 + RLTR9E LTR ERVK 28 305 -104 6 1278 335 47 0 0 chr13 90950017 90950060 -29334252 - L1Md_F2 LINE L1 -433 6149 6107 6 1278 3234 44 0 0 chr13 90950060 90950446 -29333866 + L1Md_F2 LINE L1 6197 6582 0 6 1278 548 135 127 8 chr13 90950446 90950497 -29333815 + RLTR9E LTR ERVK 260 312 -97 6 1278 252 0 0 0 chr13 90950497 90950525 -29333787 + (TC)n Simple_repeat Simple_repeat 1 28 0 6 1278 548 135 127 8 chr13 90950525 90950607 -29333705 + RLTR9E LTR ERVK 313 408 -1 6 1278 2166 238 86 11 chr13 90950607 90951230 -29333082 - L1_Mur3 LINE L1 -7083 645 19 5 1278 200 200 0 0 chr13 90951611 90951661 -29332651 + T-rich Low_complexity Low_complexity 1 50 0 6 1278 230 127 125 18 chr13 90952695 90952751 -29331561 + MusHAL1 LINE L1 2173 2234 -478 6 1278 215 299 44 44 chr13 90952940 90953031 -29331281 + B1F2 SINE Alu 9 99 -50 6 1278 235 304 0 14 chr13 90953045 90953115 -29331197 + GA-rich Low_complexity Low_complexity 4 72 0 6 1278 571 65 21 0 chr13 90955121 90955214 -29329098 + (TAGA)n Simple_repeat Simple_repeat 2 96 0 6 1278 757 285 113 55 chr13 90955986 90956281 -29328031 + MER57E1 LTR ERV1 27 347 -25 6 1278 858 149 225 17 chr13 90956281 90956459 -29327853 + B3 SINE B2 2 216 0 6 1278 757 285 113 55 chr13 90956459 90956490 -29327822 + MER57E1 LTR ERV1 348 372 0 6 1278 1195 261 55 17 chr13 90957533 90957895 -29326417 + MTEa LTR MaLR 4 379 0 6 1278 842 295 48 58 chr13 90958356 90958773 -29325539 + MT2A LTR ERVL 1 413 -120 6 1278 267 299 26 0 chr13 90958824 90958901 -29325411 + ID4_ SINE ID 1 79 -4 6 1278 684 301 18 37 chr13 90958910 90959182 -29325130 + L1MC1 LINE L1 6043 6309 -24 6 1278 498 17 0 0 chr13 90959987 90960046 -29324266 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 1278 180 0 0 0 chr13 90960117 90960137 -29324175 + (CCCCCA)n Simple_repeat Simple_repeat 4 23 0 6 1278 233 324 44 0 chr13 90960783 90960851 -29323461 - RSINE1 SINE B4 -22 143 73 6 1278 546 16 0 0 chr13 90960874 90960937 -29323375 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 6 1278 412 301 71 36 chr13 90961390 90961614 -29322698 + Lx8 LINE L1 7242 7473 0 6 1278 231 324 112 47 chr13 90962545 90962652 -29321660 - MER63D DNA AcHobo -687 374 261 6 1278 234 380 84 0 chr13 90962660 90962826 -29321486 + LTR16A1 LTR ERVL 88 267 -189 6 1279 1500 30 20 5 chr13 90964298 90964496 -29319816 + ORR1A1 LTR MaLR 138 338 -8 6 1279 14135 61 3 1 chr13 90964500 90966289 -29318023 + ORR1A1-int LTR MaLR 1 1792 0 6 1279 2291 44 0 0 chr13 90966289 90966584 -29317728 + ORR1A1 LTR MaLR 1 295 -51 6 1279 250 363 87 58 chr13 90966981 90967396 -29316916 - L3 LINE CR1 -253 4236 3810 6 1279 459 327 43 43 chr13 90967543 90967776 -29316536 - L3 LINE CR1 -1034 3455 3223 6 1279 3091 107 67 4 chr13 90968724 90969280 -29315032 + RMER17D LTR ERVK 6 596 -293 6 1279 675 0 0 0 chr13 90969523 90969598 -29314714 + (GAA)n Simple_repeat Simple_repeat 2 76 0 6 1279 1730 149 26 3 chr13 90969598 90969895 -29314417 + RMER17D LTR ERVK 581 884 -5 6 1279 506 290 58 11 chr13 90972608 90972796 -29311516 - MER117 DNA MER1_type 0 197 1 6 1279 347 297 85 40 chr13 90972863 90973063 -29311249 - MIRc SINE MIR -36 232 24 6 1279 313 247 0 0 chr13 90974812 90974897 -29309415 + (CA)n Simple_repeat Simple_repeat 2 86 0 6 1279 569 199 6 0 chr13 90974910 90975071 -29309241 + (CA)n Simple_repeat Simple_repeat 2 163 0 6 1279 501 281 13 0 chr13 90975406 90975559 -29308753 + MamRep4096 DNA hAT? 1 155 -271 6 1279 1573 38 0 21 chr13 90975562 90975752 -29308560 - B2_Mm1a SINE B2 -7 186 1 6 1279 5359 192 68 30 chr13 90976565 90977760 -29306552 + Lx9 LINE L1 6404 7643 -1 6 1279 270 0 0 0 chr13 90977994 90978024 -29306288 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1279 279 71 0 0 chr13 90979324 90979366 -29304946 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 6 1279 1315 80 23 6 chr13 90979547 90979724 -29304588 + B2_Mm2 SINE B2 2 181 -14 6 1279 310 265 102 0 chr13 90979767 90979865 -29304447 + ID_B1 SINE B4 117 224 0 6 1279 275 72 0 23 chr13 90979970 90980013 -29304299 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1279 198 0 0 0 chr13 90980051 90980073 -29304239 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 1279 389 324 19 75 chr13 90980327 90980487 -29303825 - B4A SINE B4 -139 153 3 6 1279 1176 51 0 0 chr13 90981319 90981475 -29302837 + (GTTTG)n Simple_repeat Simple_repeat 3 158 0 6 1279 223 294 0 0 chr13 90981772 90981823 -29302489 - ID4_ SINE ID -30 53 3 6 1279 300 132 0 0 chr13 90982045 90982075 -29302237 + (CTG)n Simple_repeat Simple_repeat 3 32 0 6 1279 285 29 0 0 chr13 90982075 90982109 -29302203 + (ATG)n Simple_repeat Simple_repeat 2 35 0 6 1279 300 132 0 0 chr13 90982109 90982131 -29302181 + (CTG)n Simple_repeat Simple_repeat 2 23 0 6 1279 360 43 0 0 chr13 90982192 90982238 -29302074 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 6 1279 745 142 69 23 chr13 90982268 90982398 -29301914 - B1_Mur4 SINE Alu -4 146 11 6 1279 320 234 0 0 chr13 90982342 90982406 -29301906 - B4 SINE B4 -142 150 87 6 1279 21 36 0 0 chr13 90982420 90982448 -29301864 + AT_rich Low_complexity Low_complexity 1 28 0 6 1279 389 169 40 28 chr13 90983246 90983423 -29300889 + CT-rich Low_complexity Low_complexity 1 179 0 6 1279 608 172 16 8 chr13 90983511 90983640 -29300672 - URR1B DNA MER1_type -5 220 91 6 1279 486 0 0 0 chr13 90984809 90984863 -29299449 + (TA)n Simple_repeat Simple_repeat 1 54 0 6 1279 185 304 58 0 chr13 90986350 90986419 -29297893 + MIRb SINE MIR 41 113 -155 6 1279 459 0 0 0 chr13 90986544 90986595 -29297717 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1279 275 269 0 0 chr13 90986609 90986702 -29297610 + T-rich Low_complexity Low_complexity 1 93 0 6 1279 757 263 87 87 chr13 90987658 90987813 -29296499 - MTE2a LTR MaLR 0 379 210 6 1279 471 18 0 0 chr13 90987813 90987869 -29296443 + (GA)n Simple_repeat Simple_repeat 2 57 0 6 1279 757 263 87 87 chr13 90987869 90988092 -29296220 - MTE2a LTR MaLR -170 209 3 6 1279 396 0 0 0 chr13 90988515 90988559 -29295753 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1279 248 285 110 19 chr13 90989084 90989158 -29295154 - ORR1E LTR MaLR -7 372 287 6 1279 4159 110 106 9 chr13 90989158 90989847 -29294465 - RMER6A LTR ERVK 0 756 1 6 1279 476 280 73 28 chr13 90989847 90990101 -29294211 - ORR1E LTR MaLR -93 286 1 6 1279 285 98 0 0 chr13 90990386 90990427 -29293885 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1279 219 36 0 0 chr13 90990522 90990550 -29293762 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1279 37 39 0 0 chr13 90990589 90990640 -29293672 + AT_rich Low_complexity Low_complexity 1 51 0 6 1279 308 306 122 27 chr13 90991536 90991684 -29292628 - RSINE1 SINE B4 -1 164 3 6 1279 414 294 73 7 chr13 90992022 90992159 -29292153 + Tigger7 DNA MER2_type 113 258 -2233 6 1279 357 229 24 63 chr13 90992168 90992294 -29292018 + Tigger7 DNA MER2_type 2238 2358 -133 6 1279 2145 319 58 55 chr13 90992478 90993464 -29290848 + ORR1E-int LTR MaLR 565 1553 -27 6 1279 421 319 15 7 chr13 90993453 90993589 -29290723 + ORR1E LTR MaLR 16 152 -207 6 1279 311 204 67 11 chr13 90993672 90993761 -29290551 + ORR1E LTR MaLR 286 379 0 6 1279 510 332 53 80 chr13 90994106 90994482 -29289830 - ORR1D2 LTR MaLR 0 370 5 6 1279 227 191 13 105 chr13 90994875 90994951 -29289361 - L2a LINE L2 -3 3423 3355 6 1279 437 230 70 21 chr13 90995816 90995958 -29288354 - MER121 Unknown Unknown -160 252 104 6 1279 1635 42 0 5 chr13 90997087 90997280 -29287032 + B2_Mm1a SINE B2 1 192 -1 6 1279 8097 93 33 4 chr13 90998485 90999736 -29284576 - L1_Mus3 LINE L1 -690 5948 4669 6 1279 2069 65 27 0 chr13 90999735 90999998 -29284314 + L1_Mus3 LINE L1 5959 6228 -410 6 1279 2959 84 7 10 chr13 91000000 91000408 -29283904 + L1_Mus3 LINE L1 6231 6637 -1 1 1279 39 50 0 0 chr13 91001550 91001610 -29282702 + AT_rich Low_complexity Low_complexity 1 60 0 2 1279 3594 104 38 7 chr13 91002452 91002596 -29281716 + L1Md_F2 LINE L1 5112 5257 -883 3 1279 282 29 0 0 chr13 91002596 91002631 -29281681 + (TA)n Simple_repeat Simple_repeat 1 35 0 4 1279 3594 60 26 0 chr13 91002631 91002969 -29281343 + L1Md_F2 LINE L1 5235 5584 -299 3 1279 8080 43 16 4 chr13 91002970 91003954 -29280358 + L1Md_F2 LINE L1 5587 6582 0 3 1279 573 302 29 34 chr13 91004317 91004492 -29279820 - B3A SINE B2 -36 180 7 5 1279 468 288 8 0 chr13 91004596 91004714 -29279598 + MTEa LTR MaLR 1 119 -260 6 1279 955 54 8 0 chr13 91004716 91004846 -29279466 + B1_Mus1 SINE Alu 18 148 0 7 1279 192 77 0 0 chr13 91004847 91004873 -29279439 + (GAA)n Simple_repeat Simple_repeat 2 27 0 8 1279 747 249 98 35 chr13 91004873 91005127 -29279185 + MTEa LTR MaLR 102 371 -8 6 1279 205 229 21 0 chr13 91005651 91005699 -29278613 + (CATA)n Simple_repeat Simple_repeat 4 52 0 9 1279 201 163 0 0 chr13 91006319 91006368 -29277944 + A-rich Low_complexity Low_complexity 1 49 0 1 1279 392 276 42 7 chr13 91007069 91007211 -29277101 - L1MA4 LINE L1 -40 6260 6114 1 1279 2797 196 62 16 chr13 91008214 91008760 -29275552 + Lx5 LINE L1 6480 7050 0 1 1279 1828 156 63 28 chr13 91008871 91009266 -29275046 + RLTR9E LTR ERVK 1 409 0 1 1279 287 272 176 0 chr13 91009938 91010063 -29274249 + B1_Mus2 SINE Alu 1 147 0 1 1279 1540 174 50 16 chr13 91010242 91010545 -29273767 + ORR1B1 LTR MaLR 82 394 0 1 1279 300 196 40 40 chr13 91010746 91010895 -29273417 + (TTTG)n Simple_repeat Simple_repeat 4 152 0 1 1279 576 0 0 0 chr13 91011794 91011858 -29272454 + (TG)n Simple_repeat Simple_repeat 2 65 0 1 1279 282 221 17 26 chr13 91012508 91012562 -29271750 + polypurine Low_complexity Low_complexity 2 57 0 1 1279 1374 7 0 0 chr13 91012562 91012717 -29271595 + (GGAGA)n Simple_repeat Simple_repeat 1 155 0 1 1279 282 221 17 26 chr13 91012717 91012778 -29271534 + polypurine Low_complexity Low_complexity 58 116 0 2 1279 296 111 19 0 chr13 91013457 91013511 -29270801 + (TTTG)n Simple_repeat Simple_repeat 2 56 0 2 1279 236 351 43 35 chr13 91013607 91013722 -29270590 + PB1D10 SINE Alu 1 116 -1 2 1279 212 86 0 28 chr13 91013738 91013774 -29270538 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 2 1279 436 115 90 0 chr13 91014192 91014270 -29270042 - RMER6B LTR ERVK -10 451 367 2 1279 240 100 0 0 chr13 91014297 91014337 -29269975 + (TTG)n Simple_repeat Simple_repeat 1 40 0 2 1279 7105 209 45 147 chr13 91014337 91014585 -29269727 - L1_Mur3 LINE L1 -1223 4657 4413 2 1279 3169 83 29 47 chr13 91014585 91015076 -29269236 + RLTR45 LTR ERVK 1 482 0 2 1279 7105 209 45 147 chr13 91015076 91015255 -29269057 - L1_Mur3 LINE L1 -1468 4412 4219 2 1279 2187 139 78 13 chr13 91015255 91015371 -29268941 - Lx LINE L1 -2 6652 6508 2 1279 297 0 0 0 chr13 91015371 91015404 -29268908 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1279 2187 139 78 13 chr13 91015404 91015673 -29268639 - Lx LINE L1 -147 6507 6243 2 1279 7105 209 45 147 chr13 91015673 91016813 -29267499 - L1_Mur3 LINE L1 -1662 4218 3283 2 1279 1431 79 0 16 chr13 91016813 91017005 -29267307 - B2_Mm1a SINE B2 -2 191 3 3 1279 7105 209 45 147 chr13 91017005 91018412 -29265900 - L1_Mur3 LINE L1 -2598 3282 2026 2 1279 2625 49 18 0 chr13 91018412 91018741 -29265571 - L1Md_F3 LINE L1 0 6584 6250 3 1279 7105 209 45 147 chr13 91018741 91019046 -29265266 - L1_Mur3 LINE L1 -3855 2025 1710 2 1279 212 0 36 0 chr13 91019046 91019074 -29265238 + (TTG)n Simple_repeat Simple_repeat 2 30 0 3 1279 1058 103 6 6 chr13 91019106 91019263 -29265049 - L1_Mus2 LINE L1 -1 6565 6409 3 1279 1445 43 65 5 chr13 91019265 91019450 -29264862 + L1_Mus2 LINE L1 6227 6422 -144 3 1279 889 160 111 79 chr13 91019442 91019721 -29264591 - L1_Mur3 LINE L1 -4148 1732 1445 2 1279 5229 162 43 15 chr13 91020126 91021221 -29263091 - L1_Mur3 LINE L1 -4445 1435 307 2 1279 276 327 93 0 chr13 91021279 91021386 -29262926 + MER94 DNA AcHobo 1 117 -17 3 1279 334 255 47 9 chr13 91022108 91022215 -29262097 + MamRep1879 DNA hAT? 3 113 -103 3 1279 1714 175 71 28 chr13 91022539 91022892 -29261420 - MTC LTR MaLR -53 368 1 3 1279 982 278 28 88 chr13 91023560 91023958 -29260354 + MTE2a LTR MaLR 6 379 0 3 1279 429 306 0 8 chr13 91024024 91024149 -29260163 - B1F SINE Alu -25 124 1 3 1279 219 290 74 9 chr13 91024455 91024563 -29259749 - MIR SINE MIR -77 185 71 3 1279 472 254 15 60 chr13 91024666 91024800 -29259512 + MER2 DNA MER2_type 218 345 0 4 1279 210 288 0 17 chr13 91025418 91025478 -29258834 - MIRb SINE MIR -188 80 22 4 1279 252 0 0 0 chr13 91026435 91026463 -29257849 + (T)n Simple_repeat Simple_repeat 1 28 0 4 1279 1459 182 140 22 chr13 91027739 91028110 -29256202 - MTC LTR MaLR -6 415 1 4 1279 591 227 12 8 chr13 91028233 91028476 -29255836 + GA-rich Low_complexity Low_complexity 1 243 0 4 1279 2000 30 286 0 chr13 91028569 91028877 -29255435 - MTA_Mm LTR MaLR 0 396 1 4 1279 344 243 14 0 chr13 91028918 91028988 -29255324 + ID4_ SINE ID 2 72 -11 4 1279 484 310 84 68 chr13 91029418 91029667 -29254645 - B4 SINE B4 0 292 40 4 1279 21 0 0 0 chr13 91029678 91029699 -29254613 + GC_rich Low_complexity Low_complexity 1 21 0 4 1279 432 230 142 0 chr13 91029770 91029883 -29254429 - B1_Mur1 SINE Alu -10 139 11 4 1279 372 229 57 9 chr13 91030220 91030326 -29253986 - HAL1-2a_MD LINE L1 -498 2526 2416 5 1279 581 220 121 0 chr13 91030674 91030815 -29253497 + RSINE1 SINE B4 8 165 0 5 1279 222 37 0 0 chr13 91030842 91030869 -29253443 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1279 186 118 0 0 chr13 91030869 91030903 -29253409 + (GA)n Simple_repeat Simple_repeat 1 34 0 5 1279 234 273 0 0 chr13 91031153 91031219 -29253093 + A-rich Low_complexity Low_complexity 1 66 0 5 1279 260 85 43 0 chr13 91031374 91031421 -29252891 + (CAGAGA)n Simple_repeat Simple_repeat 6 54 0 5 1279 23 0 0 0 chr13 91031424 91031447 -29252865 + AT_rich Low_complexity Low_complexity 1 23 0 5 1279 474 261 96 0 chr13 91032194 91032309 -29252003 + ID_B1 SINE B4 91 216 -8 5 1279 365 273 91 0 chr13 91032337 91032447 -29251865 + B1F SINE Alu 1 120 -29 5 1279 4537 109 77 12 chr13 91032453 91032821 -29251491 + RMER17D2 LTR ERVK 1 389 -420 5 1279 831 21 0 0 chr13 91032821 91032918 -29251394 + (TTC)n Simple_repeat Simple_repeat 3 99 0 6 1279 4537 109 77 12 chr13 91032918 91033307 -29251005 + RMER17D2 LTR ERVK 390 807 -2 5 1279 685 271 115 60 chr13 91033338 91033880 -29250432 + L1ME1 LINE L1 5577 6310 -2 6 1279 522 238 148 45 chr13 91035111 91035287 -29249025 + B3A SINE B2 1 194 -4 6 1279 231 146 0 0 chr13 91036836 91036877 -29247435 + (TTCC)n Simple_repeat Simple_repeat 2 42 0 6 1279 1295 301 73 5 chr13 91036880 91037321 -29246991 + Lx8 LINE L1 6328 6798 -675 6 1279 1629 127 61 107 chr13 91037366 91037729 -29246583 + ORR1B1 LTR MaLR 41 386 -8 6 1279 1155 54 0 0 chr13 91037733 91037880 -29246432 + (TTCC)n Simple_repeat Simple_repeat 3 149 0 6 1279 1267 34 0 0 chr13 91038763 91038911 -29245401 + B1_Mus1 SINE Alu 1 148 0 6 1279 210 37 0 0 chr13 91038924 91038951 -29245361 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1279 404 216 48 51 chr13 91039669 91039809 -29244503 + RMER13B LTR ERVK 79 228 -414 6 1279 1086 16 0 0 chr13 91040201 91040329 -29243983 + (TAGA)n Simple_repeat Simple_repeat 3 130 0 7 1279 366 23 0 0 chr13 91040775 91040818 -29243494 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1279 1304 14 0 0 chr13 91041026 91041172 -29243140 - B1_Mm SINE Alu 0 147 2 7 1279 1267 34 0 0 chr13 91041373 91041519 -29242793 + B1_Mm SINE Alu 2 147 0 7 1279 33 0 0 0 chr13 91041523 91041556 -29242756 + AT_rich Low_complexity Low_complexity 1 33 0 7 1279 408 40 0 0 chr13 91041563 91041613 -29242699 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 7 1279 870 72 0 23 chr13 91041650 91041778 -29242534 - B2_Mm2 SINE B2 -70 125 1 7 1279 345 282 0 140 chr13 91041994 91042130 -29242182 + PB1 SINE Alu 6 122 -5 7 1279 22 35 0 0 chr13 91042170 91042199 -29242113 + AT_rich Low_complexity Low_complexity 1 29 0 7 1279 799 260 15 16 chr13 91042207 91042422 -29241890 + B4 SINE B4 1 229 -63 7 1279 242 240 13 13 chr13 91042419 91042495 -29241817 + B1_Mur1 SINE Alu 74 149 0 8 1279 893 263 10 59 chr13 91042595 91042898 -29241414 - B4A SINE B4 -1 291 4 8 1279 237 281 73 0 chr13 91043460 91043542 -29240770 - L1M2 LINE L1 -453 5859 5772 8 1279 665 264 31 76 chr13 91043771 91043996 -29240316 + ID_B1 SINE B4 9 223 -1 8 1279 1156 173 14 5 chr13 91045831 91046040 -29238272 - B3 SINE B2 -3 213 3 8 1279 546 270 8 0 chr13 91046265 91046391 -29237921 + ID_B1 SINE B4 84 210 -14 8 1279 181 155 16 79 chr13 91046391 91046417 -29237895 + (CAT)n Simple_repeat Simple_repeat 2 28 0 8 1279 5169 126 73 39 chr13 91046417 91047340 -29236972 + RMER17B LTR ERVK 1 954 -4 8 1279 181 155 16 79 chr13 91047340 91047376 -29236936 + (CAT)n Simple_repeat Simple_repeat 2 33 0 8 1279 393 100 0 0 chr13 91047571 91047631 -29236681 - ORR1B1 LTR MaLR -2 392 333 8 1279 2357 58 3 0 chr13 91047628 91047940 -29236372 - MT2B2 LTR ERVL -271 313 1 9 1279 239 313 95 7 chr13 91047988 91048136 -29236176 - MER5A1 DNA MER1_type -3 163 3 9 1279 541 274 126 11 chr13 91048160 91048268 -29236044 - MER33 DNA MER1_type -24 300 172 9 1279 1260 95 0 82 chr13 91048268 91048475 -29235837 - B2_Mm2 SINE B2 -3 192 3 9 1279 541 274 126 11 chr13 91048475 91048628 -29235684 - MER33 DNA MER1_type -153 171 9 9 1279 434 235 53 8 chr13 91049146 91049279 -29235033 - LTR40a LTR ERVL 0 519 381 9 1279 1629 27 16 0 chr13 91049302 91049489 -29234823 - B2_Mm1a SINE B2 -2 191 2 9 1279 391 333 39 0 chr13 91049807 91049963 -29234349 - LTR40a LTR ERVL -262 257 96 9 1279 312 258 62 0 chr13 91051851 91051948 -29232364 - ID_B1 SINE B4 -10 214 112 9 1279 222 274 241 15 chr13 91052588 91052725 -29231587 - L3b LINE CR1 -127 355 188 9 1279 227 103 26 0 chr13 91053853 91053892 -29230420 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 9 1279 210 270 95 0 chr13 91054103 91054177 -29230135 + MIR SINE MIR 90 170 -92 9 1279 244 276 0 0 chr13 91054590 91054648 -29229664 - ID_B1 SINE B4 -8 216 159 1 1279 411 21 0 0 chr13 91054961 91055009 -29229303 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1 1279 1175 105 5 10 chr13 91055295 91055488 -29228824 + B2_Mm1a SINE B2 1 192 -1 1 1279 390 200 31 10 chr13 91055491 91055587 -29228725 + B3A SINE B2 2 99 -99 1 1279 356 280 0 39 chr13 91056183 91056287 -29228025 + B3A SINE B2 92 191 -7 1 1279 6106 119 21 7 chr13 91056329 91057274 -29227038 + RMER17B LTR ERVK 1 958 0 1 1279 357 235 12 0 chr13 91057535 91057616 -29226696 - ID4 SINE ID 0 83 2 1 1279 2382 127 80 0 chr13 91057772 91058220 -29226092 + Lx2 LINE L1 6468 7000 0 1 1279 894 180 30 24 chr13 91058228 91058450 -29225862 + RLTR13B1 LTR ERVK 1 220 -682 1 1279 26 30 0 0 chr13 91058450 91058483 -29225829 + AT_rich Low_complexity Low_complexity 1 33 0 1 1279 209 166 58 17 chr13 91058500 91058672 -29225640 + (TA)n Simple_repeat Simple_repeat 2 180 0 1 1279 345 219 86 0 chr13 91058845 91058950 -29225362 - L1MA8 LINE L1 -63 6228 6115 1 1279 531 164 171 4 chr13 91058990 91059105 -29225207 - B1_Mus1 SINE Alu -11 138 8 1 1279 765 70 219 0 chr13 91060103 91060217 -29224095 - B1_Mus1 SINE Alu -9 139 1 1 1279 284 244 36 71 chr13 91060315 91060399 -29223913 + ID_B1 SINE B4 81 161 -63 1 1279 416 202 62 21 chr13 91060326 91060422 -29223890 + PB1D7 SINE Alu 5 104 -16 1 1279 441 0 0 0 chr13 91060425 91060474 -29223838 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 1 1279 1954 189 113 8 chr13 91060567 91061043 -29223269 - RMER5 LTR ERV1 -5 529 4 1 1279 190 302 107 28 chr13 91061045 91061222 -29223090 + L2a LINE L2 2591 2781 -638 1 1279 1069 76 38 0 chr13 91061255 91061413 -29222899 + B2_Mm1a SINE B2 16 179 -14 1 1279 329 103 351 8 chr13 91061477 91061588 -29222724 + B2_Mm2 SINE B2 47 195 0 1 1279 191 61 0 29 chr13 91061668 91061702 -29222610 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1279 1102 88 0 0 chr13 91061702 91061839 -29222473 - B1_Mus2 SINE Alu -10 137 1 1 1279 192 295 169 8 chr13 91062022 91062152 -29222160 + L2a LINE L2 3218 3368 -58 1 1279 21 36 0 0 chr13 91064056 91064084 -29220228 + AT_rich Low_complexity Low_complexity 1 28 0 1 1279 1062 95 0 33 chr13 91065027 91065179 -29219133 + B1_Mus2 SINE Alu 1 147 0 1 1279 277 149 0 0 chr13 91066354 91066401 -29217911 + MTC LTR MaLR 1 47 -374 1 1279 527 237 43 22 chr13 91066548 91066686 -29217626 + B2_Mm2 SINE B2 30 170 -25 1 1279 1011 129 16 38 chr13 91066691 91066876 -29217436 + B2_Mm2 SINE B2 1 181 -14 1 1279 441 213 64 0 chr13 91066879 91066973 -29217339 - B3 SINE B2 -15 201 102 1 1279 843 184 140 4 chr13 91067060 91067295 -29217017 - MTC LTR MaLR -150 271 5 1 1279 482 202 29 9 chr13 91067299 91067404 -29216908 - B3 SINE B2 -109 107 1 1 1279 1764 142 25 160 chr13 91067792 91067844 -29216468 + ORR1C1 LTR MaLR 1 52 -326 1 1279 352 0 30 60 chr13 91067844 91067911 -29216401 + (TTTTG)n Simple_repeat Simple_repeat 1 65 0 1 1279 1138 8 8 8 chr13 91067911 91068045 -29216267 - B1_Mm SINE Alu -13 134 1 1 1279 1764 142 25 160 chr13 91068045 91068428 -29215884 + ORR1C1 LTR MaLR 53 377 -1 1 1279 555 252 0 0 chr13 91069077 91069204 -29215108 - B1F1 SINE Alu -2 147 21 1 1279 232 268 0 0 chr13 91069164 91069220 -29215092 - B4A SINE B4 -147 145 90 1 1279 632 239 21 0 chr13 91069769 91069911 -29214401 + B1F SINE Alu 5 149 0 1 1279 808 279 119 29 chr13 91069913 91070302 -29214010 + Lx6 LINE L1 5899 6347 -703 1 1279 1321 259 152 21 chr13 91070353 91070841 -29213471 + Lx6 LINE L1 6506 7432 -28 1 1279 207 0 0 0 chr13 91071289 91071312 -29213000 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1279 258 32 0 0 chr13 91071590 91071621 -29212691 + (TCC)n Simple_repeat Simple_repeat 2 32 0 1 1279 400 242 81 0 chr13 91071623 91071722 -29212590 - B1F2 SINE Alu -14 135 29 1 1279 263 184 9 101 chr13 91071735 91071844 -29212468 - Lx7 LINE L1 0 7696 7598 1 1279 317 271 100 8 chr13 91072013 91072143 -29212169 + B1F1 SINE Alu 1 142 -7 1 1279 210 274 20 0 chr13 91072155 91072206 -29212106 + ID4_ SINE ID 31 82 -1 1 1279 219 103 0 0 chr13 91072276 91072315 -29211997 + (CGAA)n Simple_repeat Simple_repeat 4 42 0 1 1279 351 0 0 0 chr13 91072315 91072354 -29211958 + (TC)n Simple_repeat Simple_repeat 1 39 0 1 1279 2569 196 63 14 chr13 91073005 91073651 -29210661 - ORR1D1-int LTR MaLR -340 1169 492 1 1279 655 172 16 0 chr13 91073861 91073989 -29210323 - ORR1D1 LTR MaLR -244 130 1 1 1279 461 248 112 0 chr13 91074264 91074389 -29209923 + Tigger5 DNA MER2_type 37 175 -2231 1 1279 280 234 136 59 chr13 91074430 91074548 -29209764 + Lx7 LINE L1 6895 7021 -675 1 1279 22 0 0 0 chr13 91075161 91075183 -29209129 + AT_rich Low_complexity Low_complexity 1 22 0 1 1279 413 66 16 0 chr13 91075325 91075386 -29208926 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1279 342 0 0 0 chr13 91075875 91075913 -29208399 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1 1279 180 0 0 0 chr13 91075914 91075934 -29208378 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1 1279 337 306 117 6 chr13 91076592 91076763 -29207549 + MIR SINE MIR 44 233 -29 1 1279 286 311 73 24 chr13 91077077 91077242 -29207070 + RLTR21 LTR ERVK 1071 1243 -329 1 1279 549 250 0 53 chr13 91077213 91077365 -29206947 - RSINE1 SINE B4 0 165 22 1 1279 1517 183 131 14 chr13 91077365 91077455 -29206857 + ORR1C2 LTR MaLR 1 89 -295 1 1279 1365 115 0 5 chr13 91077455 91077647 -29206665 + B2_Mm2 SINE B2 2 192 -3 1 1279 1517 183 131 14 chr13 91077647 91077900 -29206412 + ORR1C2 LTR MaLR 90 384 0 1 1279 3943 136 11 36 chr13 91078015 91078613 -29205699 + RMER6A LTR ERVK 51 640 -116 1 1279 1626 151 12 73 chr13 91078613 91078956 -29205356 - RLTRETN_Mm LTR ERVK 0 322 1 1 1279 3943 136 11 36 chr13 91078956 91079081 -29205231 + RMER6A LTR ERVK 641 756 0 1 1279 276 130 0 0 chr13 91079604 91079650 -29204662 + (GAA)n Simple_repeat Simple_repeat 3 48 0 1 1279 821 162 21 0 chr13 91079747 91079889 -29204423 - B1_Mur4 SINE Alu -5 145 1 1 1279 231 146 0 0 chr13 91080427 91080468 -29203844 + (GGGGA)n Simple_repeat Simple_repeat 3 43 0 1 1279 389 259 41 14 chr13 91080719 91080838 -29203474 + PB1D10 SINE Alu 1 127 0 1 1279 19304 212 84 46 chr13 91080883 91082109 -29202203 + Lx6 LINE L1 1244 3002 -3738 1 1279 5781 43 16 3 chr13 91082109 91082842 -29201470 + L1Md_F2 LINE L1 5853 6582 0 1 1279 19304 164 74 47 chr13 91082842 91083862 -29200450 + Lx6 LINE L1 3003 3942 -2798 1 1279 1275 20 0 7 chr13 91083862 91084009 -29200303 + B1_Mm SINE Alu 1 146 -1 1 1279 19304 164 74 47 chr13 91084009 91084900 -29199412 + Lx6 LINE L1 3943 4844 -1896 1 1279 3121 47 26 5 chr13 91084900 91085288 -29199024 + MTA_Mm LTR MaLR 1 396 0 1 1279 19304 165 71 45 chr13 91085288 91087399 -29196913 + Lx6 LINE L1 4845 7165 -1155 1 1279 492 289 8 8 chr13 91087439 91087561 -29196751 - ID_B1 SINE B4 -15 209 88 1 1279 758 240 56 15 chr13 91087604 91087799 -29196513 - B3 SINE B2 -12 204 2 1 1279 770 292 15 20 chr13 91088656 91088855 -29195457 - B3 SINE B2 -2 214 17 1 1279 1924 178 18 99 chr13 91088922 91089365 -29194947 + MTB_Mm LTR MaLR 1 407 0 1 1279 1704 167 40 201 chr13 91089523 91089792 -29194520 - MTC LTR MaLR 0 421 210 1 1279 672 13 0 0 chr13 91089792 91089869 -29194443 + (TTTTC)n Simple_repeat Simple_repeat 3 79 0 1 1279 1704 167 40 201 chr13 91089869 91089890 -29194422 - MTC LTR MaLR -212 209 209 1 1279 855 49 154 0 chr13 91089890 91090013 -29194299 - B1_Mus1 SINE Alu -5 143 2 1 1279 1704 167 40 201 chr13 91090013 91090223 -29194089 - MTC LTR MaLR -212 209 1 1 1279 661 154 198 24 chr13 91091071 91091197 -29193115 + B1_Mur2 SINE Alu 2 149 0 1 1279 640 271 106 44 chr13 91091747 91092021 -29192291 - B4A SINE B4 -1 291 1 1 1279 186 118 0 0 chr13 91092296 91092330 -29191982 + (TTTTG)n Simple_repeat Simple_repeat 1 34 0 1 1279 243 0 0 0 chr13 91092441 91092468 -29191844 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1279 22 35 0 0 chr13 91092619 91092648 -29191664 + AT_rich Low_complexity Low_complexity 1 29 0 1 1279 606 267 79 6 chr13 91093164 91093341 -29190971 - B3A SINE B2 -6 192 3 1 1279 354 172 151 0 chr13 91093668 91093761 -29190551 - ID_B1 SINE B4 0 224 118 1 1279 379 326 93 42 chr13 91093991 91094424 -29189888 - L1MEd LINE L1 -4858 1367 874 1 1279 506 278 24 8 chr13 91094430 91094557 -29189755 - B1_Mur1 SINE Alu -20 129 1 1 1279 432 338 0 0 chr13 91094560 91094696 -29189616 - ID_B1 SINE B4 -3 221 86 1 1280 447 19 0 0 chr13 91095052 91095104 -29189208 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1280 2416 174 26 4 chr13 91095113 91095574 -29188738 - Lx LINE L1 -11 6643 6173 1 1280 5505 55 38 0 chr13 91095574 91096331 -29187981 - MusHAL1 LINE L1 -1750 962 177 1 1280 798 147 107 0 chr13 91096331 91096481 -29187831 + RLTR23 LTR ERV1 265 430 0 1 1280 1161 122 12 16 chr13 91096481 91096697 -29187615 - RLTR25B LTR ERVK -679 349 144 1 1280 684 122 32 8 chr13 91096762 91096886 -29187426 - RLTR25B LTR ERVK -901 127 1 1 1280 351 268 0 0 chr13 91098211 91098308 -29186004 + LTR90B LTR LTR 700 796 0 1 1280 297 178 188 0 chr13 91099759 91099860 -29184452 - B1F SINE Alu -29 120 1 1 1280 441 144 115 0 chr13 91100119 91100223 -29184089 + Lx9 LINE L1 7520 7635 -9 1 1280 28 48 0 0 chr13 91100251 91100293 -29184019 + AT_rich Low_complexity Low_complexity 1 42 0 1 1280 816 159 38 0 chr13 91100625 91100757 -29183555 + B1_Mur4 SINE Alu 2 138 -12 1 1280 283 342 147 60 chr13 91101110 91101265 -29183047 + MER34A LTR ERV1 1 188 -383 1 1280 879 151 194 6 chr13 91101265 91101445 -29182867 - B3 SINE B2 0 216 3 1 1280 283 342 147 60 chr13 91101445 91101669 -29182643 + MER34A LTR ERV1 189 413 -158 1 1280 438 261 36 0 chr13 91102223 91102334 -29181978 - ID_B1 SINE B4 -19 205 91 1 1280 256 238 16 16 chr13 91103328 91103392 -29180920 - PB1D9 SINE Alu -11 109 46 1 1280 321 227 0 0 chr13 91103416 91103482 -29180830 + PB1D10 SINE Alu 47 112 -5 1 1280 484 203 68 0 chr13 91104705 91104823 -29179489 + RSINE1 SINE B4 4 129 -36 1 1280 205 255 0 0 chr13 91104829 91104880 -29179432 + A-rich Low_complexity Low_complexity 6 56 0 2 1280 384 267 219 38 chr13 91104946 91104979 -29179333 - Charlie2b DNA MER1_type -77 2705 2676 2 1280 459 52 0 0 chr13 91104979 91105037 -29179275 + (TG)n Simple_repeat Simple_repeat 2 59 0 2 1280 384 267 219 38 chr13 91105037 91105455 -29178857 - Charlie2b DNA MER1_type -107 2675 2172 2 1280 203 259 35 0 chr13 91105610 91105668 -29178644 - MIR SINE MIR -105 157 98 2 1280 234 375 64 23 chr13 91105818 91105990 -29178322 - Charlie2b DNA MER1_type -2599 183 5 2 1280 30 0 0 0 chr13 91106062 91106092 -29178220 + AT_rich Low_complexity Low_complexity 1 30 0 2 1280 207 0 0 0 chr13 91108213 91108236 -29176076 + (CCCCCA)n Simple_repeat Simple_repeat 4 26 0 2 1280 482 267 68 75 chr13 91108905 91109197 -29175115 + Lx9 LINE L1 7319 7608 -36 2 1280 748 216 132 35 chr13 91109239 91109436 -29174876 + B3 SINE B2 1 216 0 2 1280 480 288 68 37 chr13 91109579 91109770 -29174542 - B3A SINE B2 0 198 2 2 1280 265 294 84 40 chr13 91110967 91111155 -29173157 - MIR SINE MIR 0 262 71 2 1280 2712 53 8 34 chr13 91111467 91111854 -29172458 + RMER17B LTR ERVK 1 377 -581 2 1280 5718 62 25 6 chr13 91111855 91112639 -29171673 + MERVK26-int LTR ERVK 3437 4235 -2684 2 1280 258 105 0 0 chr13 91113566 91113604 -29170708 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1280 246 215 106 15 chr13 91114604 91114670 -29169642 + MIRb SINE MIR 161 232 -36 2 1280 208 259 0 18 chr13 91114695 91114750 -29169562 + (TATATG)n Simple_repeat Simple_repeat 4 57 0 2 1280 184 362 91 15 chr13 91114977 91115109 -29169203 - MIRc SINE MIR -118 150 9 2 1280 2247 71 7 0 chr13 91115154 91115450 -29168862 - L1_Mus4 LINE L1 0 6636 6339 2 1280 26 0 0 0 chr13 91116271 91116297 -29168015 + AT_rich Low_complexity Low_complexity 1 26 0 2 1280 312 70 0 0 chr13 91116406 91116449 -29167863 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1280 759 204 35 21 chr13 91116450 91116595 -29167717 - B3A SINE B2 -50 148 2 2 1280 427 242 21 0 chr13 91116624 91116719 -29167593 - PB1D10 SINE Alu 0 117 21 2 1280 865 281 26 108 chr13 91116779 91117122 -29167190 + MLT1F2 LTR MaLR 50 364 -196 2 1280 2298 91 3 0 chr13 91117372 91117690 -29166622 - ORR1A2 LTR MaLR -8 319 1 2 1280 316 244 119 25 chr13 91119599 91119717 -29164595 + RMER20A LTR ERVK 219 347 -169 2 1280 446 159 9 0 chr13 91119730 91119837 -29164475 + (TA)n Simple_repeat Simple_repeat 1 108 0 2 1280 232 321 153 12 chr13 91119916 91120001 -29164311 + RMER20A LTR ERVK 487 583 -44 2 1280 195 357 44 9 chr13 91120099 91120212 -29164100 - L2 LINE L2 -1032 2387 2271 2 1280 275 253 13 39 chr13 91120400 91120478 -29163834 + ID4 SINE ID 6 81 -71 2 1280 277 259 90 14 chr13 91120521 91120666 -29163646 - L1MC LINE L1 -2394 5488 5333 2 1280 180 306 32 123 chr13 91121248 91121468 -29162844 - L2 LINE L2 -2913 506 307 2 1280 182 294 29 29 chr13 91121877 91121947 -29162365 - L3 LINE CR1 -1 4488 4419 2 1280 453 154 0 0 chr13 91121948 91122039 -29162273 + GA-rich Low_complexity Low_complexity 2 92 0 2 1280 266 344 59 59 chr13 91122380 91122704 -29161608 + L1MEg LINE L1 462 785 -5457 2 1280 580 272 14 0 chr13 91122901 91123048 -29161264 - B1F SINE Alu 0 149 1 2 1280 341 267 23 0 chr13 91123072 91123158 -29161154 + PB1D10 SINE Alu 9 96 -21 2 1280 396 0 0 0 chr13 91123283 91123327 -29160985 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1280 241 250 0 0 chr13 91123602 91123662 -29160650 + Lx9 LINE L1 6409 6468 -1176 2 1280 866 314 45 39 chr13 91123984 91124342 -29159970 - MLT1A0 LTR MaLR -5 360 1 2 1280 1024 260 22 3 chr13 91124440 91124752 -29159560 + L1MEg LINE L1 3454 3771 -2375 2 1280 980 282 78 20 chr13 91125014 91125516 -29158796 + L1MA4A LINE L1 4869 5399 -744 2 1280 1690 221 73 0 chr13 91125516 91125900 -29158412 + MTD LTR MaLR 1 412 -7 2 1280 647 315 56 54 chr13 91125908 91126442 -29157870 + L1MA4A LINE L1 5396 5930 -373 2 1280 242 257 0 39 chr13 91126533 91126610 -29157702 + G-rich Low_complexity Low_complexity 3 76 0 2 1280 3825 106 35 14 chr13 91126855 91127449 -29156863 + L1_Mus3 LINE L1 6027 6633 -5 2 1280 405 235 0 0 chr13 91127451 91127536 -29156776 + Lx6 LINE L1 7060 7144 -316 2 1280 35 24 0 0 chr13 91127570 91127612 -29156700 + AT_rich Low_complexity Low_complexity 1 42 0 2 1280 314 284 80 0 chr13 91127694 91127856 -29156456 + L1MEg LINE L1 4504 4678 -1468 2 1280 355 294 29 7 chr13 91127989 91128126 -29156186 + L1MEg LINE L1 4899 5038 -1108 2 1280 2523 202 15 6 chr13 91128399 91128872 -29155440 + RLTR17 LTR ERVK 178 654 -38 2 1280 881 225 91 66 chr13 91128895 91129564 -29154748 + RMER3D-int LTR ERVK 1 1150 -1692 2 1280 276 196 49 86 chr13 91129573 91129735 -29154577 + RMER3D-int LTR ERVK 680 835 -2007 2 1280 834 206 9 14 chr13 91129775 91129987 -29154325 + RMER3D-int LTR ERVK 1018 1228 -1614 2 1280 336 77 0 0 chr13 91129994 91130046 -29154266 + (T)n Simple_repeat Simple_repeat 1 52 0 2 1280 1495 156 69 110 chr13 91130049 91130467 -29153845 + RMER3D-int LTR ERVK 1219 1619 -1223 2 1280 4767 181 61 49 chr13 91130556 91131837 -29152475 + RMER3D-int LTR ERVK 1547 2842 0 2 1280 1368 138 101 8 chr13 91131860 91132108 -29152204 + RLTR17 LTR ERVK 98 368 -324 2 1280 1041 109 17 6 chr13 91132150 91132326 -29151986 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 2 1280 556 224 63 8 chr13 91132571 91132697 -29151615 + RSINE1 SINE B4 4 136 -29 2 1280 2298 52 158 14 chr13 91133345 91133699 -29150613 + RLTR44A LTR ERVK 1 405 0 2 1280 192 315 35 35 chr13 91134216 91134331 -29149981 + L2 LINE L2 2260 2374 -1045 2 1280 8221 171 33 102 chr13 91135644 91136064 -29148248 + Lx6 LINE L1 3854 4285 -1595 2 1280 185 0 0 39 chr13 91136064 91136090 -29148222 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 2 1280 8221 171 37 94 chr13 91136090 91136612 -29147700 + Lx6 LINE L1 4286 4802 -1078 2 1280 525 191 105 49 chr13 91136612 91136755 -29147557 - MTE2a LTR MaLR -52 327 177 2 1280 8221 171 37 94 chr13 91136755 91137750 -29146562 + Lx6 LINE L1 4803 5791 -89 2 1280 1088 138 33 11 chr13 91137750 91137933 -29146379 + B2_Mm2 SINE B2 1 187 -8 2 1280 8221 170 69 37 chr13 91137933 91138119 -29146193 + Lx6 LINE L1 5790 5977 -1483 2 1280 1718 103 0 106 chr13 91138124 91138427 -29145885 + MT2B2 LTR ERVL 18 288 -296 2 1280 8035 124 5 7 chr13 91138385 91139634 -29144678 + ORR1A2-int LTR MaLR 718 1963 0 2 1280 2344 95 13 0 chr13 91139634 91139951 -29144361 + ORR1A2 LTR MaLR 1 321 -6 2 1280 900 244 58 19 chr13 91139979 91140238 -29144074 + Lx6 LINE L1 5983 6251 -1209 2 1280 686 192 43 15 chr13 91140829 91141021 -29143291 + Lx7 LINE L1 4635 4818 -1062 2 1280 416 234 174 17 chr13 91141025 91141198 -29143114 + Lx7 LINE L1 5976 6168 -1528 2 1280 315 0 0 0 chr13 91141198 91141233 -29143079 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1280 416 234 174 17 chr13 91141233 91141294 -29143018 + Lx7 LINE L1 6169 6246 -1450 2 1280 1704 280 62 43 chr13 91141354 91142078 -29142234 + Lx7 LINE L1 6548 7285 -411 2 1280 445 256 98 10 chr13 91142374 91142579 -29141733 + L1M4 LINE L1 4477 4699 -1447 2 1280 563 237 59 0 chr13 91142644 91142779 -29141533 + ID_B1 SINE B4 82 224 0 2 1280 202 143 71 0 chr13 91142781 91142823 -29141489 + A-rich Low_complexity Low_complexity 4 48 0 2 1280 433 300 101 17 chr13 91142850 91143267 -29141045 + L1M4 LINE L1 4800 5251 -895 2 1280 310 286 19 0 chr13 91143271 91143389 -29140923 + L1M4 LINE L1 5358 5477 -697 2 1280 303 85 0 0 chr13 91143613 91143660 -29140652 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 2 1280 361 161 0 0 chr13 91144253 91144313 -29139999 + B1_Mus2 SINE Alu 63 122 -27 2 1280 200 310 190 0 chr13 91144644 91144744 -29139568 - MIRb SINE MIR -115 153 35 2 1280 290 301 12 0 chr13 91145132 91145215 -29139097 + Charlie4z DNA MER1_type 83 166 -1 2 1280 196 402 37 0 chr13 91145971 91146053 -29138259 + L4 LINE RTE 1134 1218 -811 2 1280 228 149 0 0 chr13 91146349 91146396 -29137916 + (GA)n Simple_repeat Simple_repeat 2 48 0 2 1280 444 121 22 11 chr13 91146508 91146600 -29137712 + (TA)n Simple_repeat Simple_repeat 2 94 0 2 1280 369 0 0 0 chr13 91147232 91147273 -29137039 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1280 588 211 89 8 chr13 91147615 91147739 -29136573 + ID_B1 SINE B4 90 223 -1 2 1280 29 70 0 0 chr13 91148031 91148088 -29136224 + AT_rich Low_complexity Low_complexity 1 57 0 2 1280 756 241 2 22 chr13 91148583 91148763 -29135549 - B3A SINE B2 -10 206 36 2 1280 741 97 0 17 chr13 91149225 91149340 -29134972 + BC1_Mm scRNA scRNA 1 113 -39 2 1280 618 333 63 39 chr13 91150239 91150523 -29133789 - B4A SINE B4 -1 291 1 2 1280 654 210 90 11 chr13 91151094 91151282 -29133030 + ORSL DNA Tip100 29 231 -44 2 1280 1098 280 37 68 chr13 91151398 91151781 -29132531 - MTEa LTR MaLR -8 371 1 2 1280 215 255 18 45 chr13 91151852 91151963 -29132349 - L3 LINE CR1 -1642 2847 2740 2 1280 245 280 34 96 chr13 91151978 91152124 -29132188 + MLT1A1 LTR MaLR 272 408 0 2 1280 531 141 0 0 chr13 91152435 91152527 -29131785 + (TA)n Simple_repeat Simple_repeat 1 92 0 2 1280 383 301 72 80 chr13 91152920 91153542 -29130770 + L1MC5 LINE L1 6956 7572 -389 2 1280 1394 55 22 11 chr13 91153672 91153855 -29130457 + B2_Mm2 SINE B2 2 186 -9 2 1280 369 260 24 24 chr13 91153860 91153986 -29130326 - L1MD2 LINE L1 -29 6330 6205 2 1280 587 282 125 15 chr13 91154126 91154737 -29129575 + Lx8 LINE L1 4945 5629 -662 2 1280 1503 205 164 30 chr13 91154790 91155222 -29129090 - RLTR17 LTR ERVK -95 597 108 2 1280 1916 288 129 31 chr13 91155234 91156427 -29127885 + Lx8 LINE L1 5600 6906 -790 2 1280 437 253 266 33 chr13 91156670 91156911 -29127401 + Lx8 LINE L1 6869 7165 -308 2 1280 519 17 0 0 chr13 91157193 91157253 -29127059 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1280 924 232 4 4 chr13 91157300 91157538 -29126774 - L1MD1 LINE L1 -307 5935 5698 2 1280 1224 48 0 0 chr13 91157819 91157966 -29126346 - B1_Mus2 SINE Alu 0 147 1 2 1280 333 0 0 0 chr13 91158331 91158368 -29125944 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1280 856 169 14 7 chr13 91159595 91159738 -29124574 + B1_Mur1 SINE Alu 1 144 -5 2 1280 391 301 38 38 chr13 91160008 91160167 -29124145 - RSINE1 SINE B4 -4 161 3 2 1280 241 163 23 0 chr13 91161168 91161211 -29123101 + B1_Mur2 SINE Alu 101 144 -5 2 1280 456 19 0 0 chr13 91161303 91161356 -29122956 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1280 238 329 14 0 chr13 91161472 91161542 -29122770 - B4A SINE B4 -220 72 2 2 1280 747 108 0 0 chr13 91161559 91161670 -29122642 + (TTCC)n Simple_repeat Simple_repeat 1 111 0 2 1280 350 214 71 0 chr13 91161672 91161756 -29122556 - PB1D9 SINE Alu 0 120 31 2 1280 268 336 95 92 chr13 91161809 91162209 -29122103 - L2c LINE L2 -12 3375 2975 2 1280 22 0 0 0 chr13 91164976 91164998 -29119314 + AT_rich Low_complexity Low_complexity 1 22 0 2 1280 1889 227 104 18 chr13 91165356 91166005 -29118307 + Lx7 LINE L1 7000 7676 -20 2 1280 240 292 0 0 chr13 91166169 91166234 -29118078 + ID4 SINE ID 9 73 -10 2 1280 235 278 0 53 chr13 91166234 91166245 -29118067 + tRNA-Ala-GCY_ tRNA tRNA 3 74 -1 3 1280 9552 53 1 0 chr13 91166284 91168219 -29116093 - L1Md_F2 LINE L1 -12 6570 4635 3 1280 229 206 58 14 chr13 91169050 91169119 -29115193 - L1M5 LINE L1 -433 5691 5620 3 1280 182 275 0 56 chr13 91169225 91169279 -29115033 - MIRm SINE MIR -19 257 207 3 1280 424 270 146 40 chr13 91169592 91170071 -29114241 - L1MB8 LINE L1 -9 6169 5627 3 1280 321 256 0 0 chr13 91170180 91170305 -29114007 + (CA)n Simple_repeat Simple_repeat 2 126 0 3 1280 477 76 0 0 chr13 91170370 91170436 -29113876 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1280 398 292 157 30 chr13 91170530 91170728 -29113584 + MARNA DNA Mariner 16 238 -348 3 1280 261 353 117 62 chr13 91170841 91170986 -29113326 - RSINE1 SINE B4 -4 161 9 3 1280 1206 54 7 0 chr13 91171226 91171373 -29112939 + B1_Mus1 SINE Alu 1 148 0 3 1280 230 280 20 0 chr13 91172088 91172138 -29112174 - L2c LINE L2 -2 3385 3335 3 1280 645 253 117 35 chr13 91174128 91174325 -29109987 - B3 SINE B2 -1 215 3 3 1280 315 71 0 0 chr13 91174504 91174546 -29109766 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1280 388 291 0 95 chr13 91174552 91174700 -29109612 - ID_B1 SINE B4 -11 213 80 3 1280 266 320 48 19 chr13 91177040 91177145 -29107167 + PB1D7 SINE Alu 2 109 -11 3 1280 240 86 0 0 chr13 91178027 91178062 -29106250 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1280 201 203 33 33 chr13 91178171 91178232 -29106080 + GA-rich Low_complexity Low_complexity 2 62 0 3 1280 297 100 0 0 chr13 91178294 91178344 -29105968 + (CAA)n Simple_repeat Simple_repeat 2 51 0 3 1280 280 294 0 0 chr13 91180872 91180940 -29103372 + G-rich Low_complexity Low_complexity 5 72 0 3 1280 4012 94 38 5 chr13 91181365 91181952 -29102360 + Lx3_Mus LINE L1 6396 7001 -8 3 1280 321 324 90 72 chr13 91182799 91183078 -29101234 + L1M5 LINE L1 5536 5819 -305 3 1280 3956 134 67 20 chr13 91183235 91183895 -29100417 - RLTR17 LTR ERVK 0 692 2 3 1280 330 281 59 52 chr13 91184159 91184294 -29100018 - L1M5 LINE L1 -681 5443 5308 3 1280 810 31 0 0 chr13 91184433 91184530 -29099782 + (GA)n Simple_repeat Simple_repeat 2 98 0 3 1280 350 304 18 18 chr13 91184704 91184818 -29099494 - PB1D10 SINE Alu -3 114 1 3 1280 661 237 65 33 chr13 91185586 91185663 -29098649 + ID_B1 SINE B4 4 224 0 3 1280 1034 73 0 0 chr13 91185663 91185800 -29098512 + B1_Mus2 SINE Alu 11 147 0 3 1280 6717 132 19 1 chr13 91189523 91189823 -29094489 - Lx2 LINE L1 0 6997 6688 3 1280 360 0 0 0 chr13 91189823 91189863 -29094449 + (GGGTG)n Simple_repeat Simple_repeat 2 41 0 3 1280 6717 132 19 1 chr13 91189863 91190624 -29093688 - Lx2 LINE L1 -310 6687 5918 3 1280 3896 81 16 15 chr13 91190636 91191252 -29093060 - MusHAL1 LINE L1 -1456 1256 640 3 1280 1851 168 71 6 chr13 91191414 91191768 -29092544 + ORR1C1 LTR MaLR 2 378 0 3 1280 515 249 164 7 chr13 91191890 91192130 -29092182 - MER58B DNA MER1_type -3 338 43 3 1280 942 261 80 32 chr13 91192130 91192569 -29091743 + Lx9 LINE L1 7169 7628 -16 3 1280 1045 124 142 14 chr13 91192580 91192792 -29091520 + RMER6-int LTR ERVK 2807 3045 -132 3 1280 31551 84 28 13 chr13 91192798 91199449 -29084863 + Lx3A LINE L1 223 6981 0 3 1280 2481 172 65 20 chr13 91199481 91199985 -29084327 + RMER1B Other Other 540 1066 0 3 1280 363 44 0 0 chr13 91201275 91201320 -29082992 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1280 438 397 91 32 chr13 91201904 91202276 -29082036 - LTR16C LTR ERVL 0 489 96 3 1280 471 279 126 57 chr13 91202375 91202622 -29081690 + MER46C DNA MER2_type 9 272 -66 3 1280 21 0 0 0 chr13 91202760 91202781 -29081531 + AT_rich Low_complexity Low_complexity 1 21 0 3 1280 3421 130 22 3 chr13 91202975 91203604 -29080708 - Lx LINE L1 -719 5919 5282 3 1280 4528 132 23 3 chr13 91203609 91204347 -29079965 + Lx LINE L1 5902 6654 0 3 1280 21888 139 11 3 chr13 91204498 91205527 -29078785 + L1_Mus4 LINE L1 387 1425 -4458 3 1280 1209 48 0 0 chr13 91205527 91205674 -29078638 + B1_Mm SINE Alu 1 147 0 3 1280 21888 167 24 26 chr13 91205674 91206573 -29077739 + L1_Mus4 LINE L1 1426 2310 -3573 3 1280 264 111 0 0 chr13 91206573 91206609 -29077703 - U2 snRNA snRNA -152 36 1 3 1280 21888 167 24 26 chr13 91206609 91207193 -29077119 + L1_Mus4 LINE L1 2311 2887 -2996 3 1280 998 110 0 6 chr13 91207193 91207349 -29076963 + (GGAA)n Simple_repeat Simple_repeat 3 157 0 3 1280 21888 146 25 27 chr13 91207349 91211042 -29073270 + L1_Mus4 LINE L1 2888 6628 -8 3 1280 1029 116 7 0 chr13 91211275 91211422 -29072890 - B1_Mus1 SINE Alu 0 148 1 3 1280 313 265 108 0 chr13 91211645 91211747 -29072565 + L1MD LINE L1 3648 3760 -2386 3 1280 375 302 61 55 chr13 91211826 91212152 -29072160 + L1ME1 LINE L1 4286 4613 -1533 3 1280 306 266 74 34 chr13 91212975 91213123 -29071189 + L1ME1 LINE L1 5803 5956 -223 3 1280 623 241 137 20 chr13 91213169 91213469 -29070843 + Lx9 LINE L1 7310 7644 0 3 1280 8320 31 0 0 chr13 91213651 91215350 -29068962 - L1Md_T LINE L1 0 6582 4884 3 1280 272 267 117 15 chr13 91215471 91215608 -29068704 + L1MC3 LINE L1 6285 6435 -1350 3 1280 1409 306 62 17 chr13 91215603 91216198 -29068114 + Lx8 LINE L1 6782 7403 -70 3 1280 537 16 0 0 chr13 91216242 91216304 -29068008 + (TAA)n Simple_repeat Simple_repeat 2 63 0 3 1280 448 317 145 6 chr13 91216353 91216677 -29067635 + L1MC3 LINE L1 6478 6846 -939 3 1280 413 311 97 99 chr13 91216894 91217266 -29067046 + RLTR26 LTR ERVK 249 619 -23 3 1280 1246 119 114 0 chr13 91218081 91218283 -29066029 - URR1A DNA MER1_type 0 226 2 3 1280 364 296 118 20 chr13 91218376 91218631 -29065681 + B4A SINE B4 3 282 -10 3 1280 396 0 0 0 chr13 91218672 91218716 -29065596 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1280 623 299 12 30 chr13 91219024 91219193 -29065119 + B3A SINE B2 3 168 -30 3 1280 1615 109 0 42 chr13 91219906 91220165 -29064147 + L1Md_F2 LINE L1 6329 6576 -6 3 1280 432 0 0 0 chr13 91220790 91220838 -29063474 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1280 363 281 81 7 chr13 91221027 91221163 -29063149 + B1F1 SINE Alu 3 148 -1 3 1280 264 313 0 15 chr13 91221170 91221238 -29063074 + ID4_ SINE ID 3 69 -14 3 1280 306 0 0 0 chr13 91221243 91221277 -29063035 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1280 1006 297 65 38 chr13 91222384 91222965 -29061347 + Lx8 LINE L1 6817 7413 -60 3 1280 1808 134 62 20 chr13 91223056 91223360 -29060952 + MTC LTR MaLR 1 317 -104 3 1280 345 165 154 0 chr13 91223360 91223451 -29060861 - Lx9 LINE L1 -450 7194 7090 3 1281 555 16 0 0 chr13 91227744 91227808 -29056504 + (TG)n Simple_repeat Simple_repeat 1 64 0 3 1281 292 345 0 8 chr13 91228467 91228584 -29055728 - PB1D10 SINE Alu 0 117 2 3 1281 2039 205 11 50 chr13 91228786 91228902 -29055410 + MTD LTR MaLR 1 114 -305 3 1281 3586 144 167 40 chr13 91228902 91229245 -29055067 + RMER17A2 LTR ERVK 1 353 -553 3 1281 334 0 21 21 chr13 91229245 91229292 -29055020 + (TC)n Simple_repeat Simple_repeat 1 47 0 3 1281 3586 144 167 40 chr13 91229292 91229752 -29054560 + RMER17A2 LTR ERVK 354 905 -1 3 1281 2039 205 11 50 chr13 91229752 91230071 -29054241 + MTD LTR MaLR 115 419 0 3 1281 198 0 0 0 chr13 91230286 91230308 -29054004 + (CA)n Simple_repeat Simple_repeat 1 22 0 3 1281 424 314 291 14 chr13 91230510 91230784 -29053528 + ORR1E LTR MaLR 4 353 -6 3 1281 189 0 0 0 chr13 91232115 91232136 -29052176 + (TTA)n Simple_repeat Simple_repeat 1 21 0 3 1281 310 296 57 0 chr13 91232240 91232328 -29051984 + Lx8 LINE L1 7136 7228 -245 3 1281 279 0 0 0 chr13 91233662 91233693 -29050619 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1281 23 68 0 0 chr13 91235788 91235832 -29048480 + AT_rich Low_complexity Low_complexity 1 44 0 3 1281 294 266 168 8 chr13 91236539 91236664 -29047648 - RSINE1 SINE B4 -18 147 3 3 1281 1333 147 222 0 chr13 91236677 91236956 -29047356 - MTC LTR MaLR -80 341 1 3 1281 934 93 0 0 chr13 91237065 91237204 -29047108 - L1_Mus1 LINE L1 0 6567 6429 3 1281 205 211 40 40 chr13 91237916 91237990 -29046322 + (TATG)n Simple_repeat Simple_repeat 2 75 0 3 1281 192 77 0 0 chr13 91237990 91238016 -29046296 + (GA)n Simple_repeat Simple_repeat 1 26 0 3 1281 207 0 0 0 chr13 91238017 91238040 -29046272 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 3 1281 291 343 104 28 chr13 91238065 91238209 -29046103 - B4 SINE B4 -11 281 127 3 1281 226 118 0 0 chr13 91238240 91238281 -29046031 + Lx3B LINE L1 6933 6973 -3 3 1281 316 258 10 79 chr13 91238317 91238376 -29045936 - B4A SINE B4 -197 95 40 3 1281 1292 177 212 3 chr13 91238376 91238682 -29045630 - ORR1D1 LTR MaLR 0 374 5 3 1281 316 258 10 79 chr13 91238682 91238723 -29045589 - B4A SINE B4 -253 39 2 3 1281 525 335 149 40 chr13 91238848 91238936 -29045376 + MLT1J LTR MaLR 16 112 -400 3 1281 366 23 0 0 chr13 91238936 91238979 -29045333 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1281 558 0 0 0 chr13 91238980 91239042 -29045270 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 3 1281 525 335 149 40 chr13 91239042 91239321 -29044991 + MLT1J LTR MaLR 113 425 -87 3 1281 208 335 81 71 chr13 91239459 91239742 -29044570 - L3 LINE CR1 -501 3988 3703 3 1281 21 0 0 0 chr13 91241131 91241152 -29043160 + AT_rich Low_complexity Low_complexity 1 21 0 3 1281 773 291 6 6 chr13 91241365 91241538 -29042774 - B4 SINE B4 -6 286 114 3 1281 529 306 53 33 chr13 91241533 91241787 -29042525 - B4A SINE B4 -20 272 1 3 1281 261 260 40 30 chr13 91241995 91242094 -29042218 + PB1D10 SINE Alu 2 101 -16 3 1281 408 281 0 0 chr13 91242818 91242985 -29041327 + (CA)n Simple_repeat Simple_repeat 2 168 0 3 1281 276 248 0 34 chr13 91243000 91243146 -29041166 + (CATA)n Simple_repeat Simple_repeat 2 142 0 3 1281 7629 47 3 2 chr13 91243450 91244623 -29039689 - L1Md_F3 LINE L1 -14 6570 5396 3 1281 429 303 14 14 chr13 91244922 91245069 -29039243 + B1_Mur1 SINE Alu 2 148 -1 3 1281 2874 43 3 0 chr13 91245147 91245492 -29038820 - ORR1A1 LTR MaLR 0 346 1 3 1281 4245 189 72 54 chr13 91245619 91246653 -29037659 + RMER1B Other Other 1 1053 -13 3 1281 669 251 132 28 chr13 91248053 91248340 -29035972 + Lx8 LINE L1 6936 7252 -221 4 1281 1176 68 7 0 chr13 91248340 91248486 -29035826 + B1_Mus1 SINE Alu 1 147 -1 4 1281 213 122 23 47 chr13 91248585 91248628 -29035684 + GA-rich Low_complexity Low_complexity 1 42 0 4 1281 21 0 0 0 chr13 91248708 91248729 -29035583 + AT_rich Low_complexity Low_complexity 1 21 0 4 1281 2567 192 50 4 chr13 91249092 91249593 -29034719 - Lx5 LINE L1 -4 7046 6523 4 1281 323 304 0 11 chr13 91249706 91249799 -29034513 + PB1D10 SINE Alu 12 103 -14 4 1281 3836 199 41 1 chr13 91249865 91250669 -29033643 + Lx9 LINE L1 6483 7318 -326 4 1281 749 171 83 11 chr13 91250666 91250947 -29033365 + Lx9 LINE L1 6957 7465 -179 4 1281 570 67 0 0 chr13 91250951 91251026 -29033286 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 4 1281 351 0 0 0 chr13 91251057 91251096 -29033216 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 4 1281 992 109 14 0 chr13 91251096 91251234 -29033078 - B1_Mus1 SINE Alu -8 140 1 4 1281 23 0 0 0 chr13 91251536 91251559 -29032753 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 21 100 0 0 chr13 91251627 91251697 -29032615 + AT_rich Low_complexity Low_complexity 1 70 0 4 1281 391 381 94 18 chr13 91251780 91252055 -29032257 - L1M5 LINE L1 -491 5633 5338 4 1281 284 295 69 49 chr13 91252273 91252476 -29031836 + L1MEc LINE L1 37 243 -6157 4 1281 1873 245 111 41 chr13 91252538 91253241 -29031071 + Lx7 LINE L1 6612 7363 -333 4 1281 183 205 0 0 chr13 91253276 91253315 -29030997 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 4 1281 731 224 42 7 chr13 91253496 91253640 -29030672 + B1_Mur1 SINE Alu 1 149 0 4 1281 308 299 162 18 chr13 91253751 91254131 -29030181 + L1MEc LINE L1 451 885 -5515 4 1281 295 172 45 30 chr13 91254330 91254396 -29029916 + RMER5 LTR ERV1 323 389 -145 4 1281 191 62 0 59 chr13 91254401 91254435 -29029877 + (TCTCCC)n Simple_repeat Simple_repeat 6 37 0 4 1281 544 312 22 7 chr13 91254941 91255080 -29029232 + ID_B1 SINE B4 82 222 -2 4 1281 226 226 0 0 chr13 91255175 91255228 -29029084 + (CATA)n Simple_repeat Simple_repeat 4 56 0 4 1281 489 132 32 62 chr13 91255213 91255552 -29028760 + (TAGA)n Simple_repeat Simple_repeat 1 328 0 4 1281 222 37 0 0 chr13 91255566 91255593 -29028719 + (CATA)n Simple_repeat Simple_repeat 2 28 0 4 1281 349 265 91 5 chr13 91255643 91255829 -29028483 + L1MEc LINE L1 1078 1279 -5121 4 1281 322 291 91 0 chr13 91256411 91256521 -29027791 + MLT1H2 LTR MaLR 370 489 0 4 1281 3820 153 144 57 chr13 91256670 91257428 -29026884 + RMER19B LTR ERVK 5 821 -81 4 1281 210 37 0 0 chr13 91257428 91257455 -29026857 + (G)n Simple_repeat Simple_repeat 1 27 0 4 1281 3820 153 144 57 chr13 91257455 91257522 -29026790 + RMER19B LTR ERVK 822 902 0 4 1281 419 308 37 85 chr13 91258430 91258628 -29025684 - L1MD LINE L1 -2189 3957 3780 4 1281 864 252 19 10 chr13 91258628 91258836 -29025476 - B3 SINE B2 -5 211 2 4 1281 419 308 37 85 chr13 91258836 91259038 -29025274 - L1MD LINE L1 -2367 3779 3576 4 1281 594 265 54 5 chr13 91259202 91259288 -29025024 + L1MA4 LINE L1 5692 5786 -514 4 1281 473 32 0 16 chr13 91259288 91259352 -29024960 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1281 594 265 54 5 chr13 91259352 91259489 -29024823 + L1MA4 LINE L1 5787 5925 -375 4 1281 23 33 0 0 chr13 91259964 91259994 -29024318 + AT_rich Low_complexity Low_complexity 1 30 0 4 1281 1781 114 3 14 chr13 91259994 91260279 -29024033 - Lx3_Mus LINE L1 0 7009 6728 4 1281 2072 71 0 0 chr13 91260280 91260563 -29023749 + Lx3_Mus LINE L1 6372 6654 -355 4 1281 330 256 167 53 chr13 91260874 91261006 -29023306 + HAL1-3A_ME LINE L1 2293 2439 -419 4 1281 198 191 0 0 chr13 91261071 91261118 -29023194 + GA-rich Low_complexity Low_complexity 2 48 0 4 1281 24 0 0 0 chr13 91261584 91261608 -29022704 + AT_rich Low_complexity Low_complexity 1 24 0 4 1281 22 56 0 0 chr13 91261956 91261992 -29022320 + AT_rich Low_complexity Low_complexity 1 36 0 4 1281 488 262 56 66 chr13 91262385 91262428 -29021884 + Lx9 LINE L1 6302 6340 -1304 4 1281 512 89 13 0 chr13 91262428 91262507 -29021805 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 1281 1286 292 125 43 chr13 91262507 91263523 -29020789 + Lx9 LINE L1 6200 7470 -174 4 1281 487 239 137 0 chr13 91263607 91263724 -29020588 + ID_B1 SINE B4 88 220 -4 4 1281 462 311 102 49 chr13 91263734 91263998 -29020314 + B4A SINE B4 3 280 -12 4 1281 22 0 0 0 chr13 91265320 91265342 -29018970 + AT_rich Low_complexity Low_complexity 1 22 0 4 1281 831 244 68 32 chr13 91265890 91266170 -29018142 + RMER1A Other Other 144 433 -597 4 1281 3806 159 61 18 chr13 91266173 91266883 -29017429 + RMER1A Other Other 286 1025 -5 4 1281 387 0 0 0 chr13 91267061 91267104 -29017208 + (TC)n Simple_repeat Simple_repeat 1 43 0 4 1281 360 0 0 0 chr13 91267104 91267143 -29017169 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1281 22 0 0 0 chr13 91267148 91267170 -29017142 + AT_rich Low_complexity Low_complexity 1 22 0 4 1281 2593 114 2 2 chr13 91267507 91267921 -29016391 + L1_Mm LINE L1 4603 5016 -867 4 1281 189 107 0 0 chr13 91269334 91269362 -29014950 + (ATATG)n Simple_repeat Simple_repeat 2 29 0 4 1281 186 325 0 46 chr13 91269701 91269788 -29014524 + MER5A DNA MER1_type 30 112 -77 4 1281 317 357 20 47 chr13 91269783 91269933 -29014379 - MIRb SINE MIR -116 152 7 4 1281 2196 150 46 18 chr13 91271512 91271906 -29012406 - MTB_Mm LTR MaLR -2 405 1 4 1281 694 249 70 20 chr13 91274252 91274453 -29009859 + B3 SINE B2 1 211 -5 4 1281 474 288 61 0 chr13 91274576 91274708 -29009604 + B1_Mur1 SINE Alu 3 142 -7 4 1281 3299 257 35 30 chr13 91275987 91276941 -29007371 + Lx8 LINE L1 6192 7149 -324 4 1281 318 321 89 27 chr13 91277808 91277920 -29006392 - RSINE1 SINE B4 -46 119 1 4 1281 409 275 41 34 chr13 91278123 91278270 -29006042 + B1F SINE Alu 1 148 -1 4 1281 186 310 122 14 chr13 91278789 91278936 -29005376 - L3 LINE CR1 -263 4226 4064 4 1281 351 232 38 91 chr13 91279058 91279391 -29004921 - Charlie1b DNA MER1_type 0 523 161 4 1281 554 290 80 0 chr13 91279910 91280150 -29004162 - MER2 DNA MER2_type -50 295 32 4 1281 287 321 79 21 chr13 91280209 91280349 -29003963 + LTR16A1 LTR ERVL 3 150 -306 4 1281 348 300 61 8 chr13 91280475 91280606 -29003706 + LTR16A1 LTR ERVL 319 456 0 4 1281 478 228 21 151 chr13 91280712 91280898 -29003414 + MER5A DNA MER1_type 3 164 -25 4 1281 306 309 226 11 chr13 91280913 91281090 -29003222 + MIR SINE MIR 13 227 -35 4 1281 205 313 58 51 chr13 91281331 91281469 -29002843 - L3 LINE CR1 -909 3580 3442 4 1281 3513 210 25 244 chr13 91282827 91283003 -29001309 + L1_Mur2 LINE L1 3542 3711 -2175 4 1281 1238 48 0 0 chr13 91283003 91283149 -29001163 + B1_Mm SINE Alu 2 147 0 4 1281 3896 190 34 151 chr13 91283149 91283673 -29000639 + L1_Mur2 LINE L1 3712 4173 -1713 4 1281 314 291 62 46 chr13 91283673 91283914 -29000398 + RLTR15 LTR ERVK 48 292 -67 4 1281 3896 190 34 151 chr13 91283914 91284771 -28999541 + L1_Mur2 LINE L1 4174 4931 -955 4 1281 201 74 0 0 chr13 91284771 91284798 -28999514 + (CA)n Simple_repeat Simple_repeat 1 27 0 4 1281 3896 165 45 43 chr13 91284798 91284871 -28999441 + L1_Mur2 LINE L1 4923 4995 -882 4 1281 5221 79 41 32 chr13 91284868 91285382 -28998930 + L1VL2 LINE L1 284 822 -5513 4 1281 1597 47 5 0 chr13 91285382 91285574 -28998738 + B2_Mm1a SINE B2 1 193 0 4 1281 13384 85 41 16 chr13 91285574 91287708 -28996604 + L1VL2 LINE L1 823 2988 -627 4 1281 1215 61 0 0 chr13 91288036 91288184 -28996128 - B1_Mus1 SINE Alu 0 148 1 4 1281 22 0 0 0 chr13 91288443 91288465 -28995847 + AT_rich Low_complexity Low_complexity 1 22 0 4 1281 2060 141 47 0 chr13 91288475 91288837 -28995475 + L1_Mur2 LINE L1 4979 5357 -520 4 1281 3406 101 2 6 chr13 91288837 91289314 -28994998 + MT2C_Mm LTR ERVL 1 475 0 4 1281 837 155 0 0 chr13 91289846 91289994 -28994318 + GA-rich Low_complexity Low_complexity 4 151 0 4 1281 1572 267 91 22 chr13 91290004 91290363 -28993949 + Lx6 LINE L1 6946 7318 -142 4 1281 594 0 0 0 chr13 91290363 91290429 -28993883 + (TTTTG)n Simple_repeat Simple_repeat 3 68 0 4 1281 1572 268 94 17 chr13 91290429 91290562 -28993750 + Lx6 LINE L1 7319 7459 -1 4 1281 294 95 0 0 chr13 91290607 91290649 -28993663 + (TCC)n Simple_repeat Simple_repeat 2 43 0 4 1281 194 194 16 0 chr13 91291051 91291113 -28993199 + (TA)n Simple_repeat Simple_repeat 2 64 0 4 1281 339 378 63 0 chr13 91291135 91291262 -28993050 - ID_B1 SINE B4 -2 222 88 4 1281 23 0 0 0 chr13 91291524 91291547 -28992765 + AT_rich Low_complexity Low_complexity 1 23 0 4 1281 241 258 220 43 chr13 91292470 91292648 -28991664 + B4A SINE B4 5 214 -78 4 1281 238 374 0 6 chr13 91292729 91292909 -28991403 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1281 684 263 17 17 chr13 91294662 91294840 -28989472 - B3A SINE B2 -20 178 1 4 1281 282 266 51 0 chr13 91295424 91295503 -28988809 + ID4 SINE ID 1 83 0 4 1281 242 256 73 0 chr13 91296694 91296776 -28987536 + MER5A1 DNA MER1_type 17 104 -62 4 1281 1201 61 0 0 chr13 91297469 91297616 -28986696 + B1_Mus2 SINE Alu 1 147 0 4 1281 280 253 13 0 chr13 91297637 91297712 -28986600 + ID SINE ID 3 78 -146 4 1281 389 259 4 189 chr13 91297846 91298084 -28986228 + B3A SINE B2 5 198 0 4 1281 531 237 69 0 chr13 91298563 91298694 -28985618 + B1_Mur2 SINE Alu 2 141 -8 4 1281 297 143 0 0 chr13 91299848 91299897 -28984415 + B1_Mur4 SINE Alu 99 147 -3 4 1281 1263 35 0 0 chr13 91300738 91300882 -28983430 + B1_Mm SINE Alu 4 147 0 4 1281 640 271 6 6 chr13 91300918 91301085 -28983227 + B3 SINE B2 37 203 -13 4 1281 1253 248 71 15 chr13 91301104 91301444 -28982868 + ORR1E LTR MaLR 1 359 0 4 1281 255 333 38 68 chr13 91301597 91301729 -28982583 + ID_B1 SINE B4 27 154 -70 4 1281 225 225 143 48 chr13 91301674 91301758 -28982554 + PB1D10 SINE Alu 18 109 -8 4 1281 53 57 0 0 chr13 91301837 91301925 -28982387 + AT_rich Low_complexity Low_complexity 1 88 0 4 1281 247 350 13 6 chr13 91302258 91302460 -28981852 + GA-rich Low_complexity Low_complexity 1 203 0 4 1281 561 15 0 0 chr13 91303346 91303412 -28980900 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 1281 457 327 0 37 chr13 91304281 91304443 -28979869 - MLT1C LTR MaLR -243 224 69 4 1281 342 0 0 0 chr13 91304852 91304890 -28979422 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1281 329 300 152 31 chr13 91305376 91305957 -28978355 + L1MEc LINE L1 70 720 -5680 4 1281 448 339 85 0 chr13 91305955 91306191 -28978121 + L1MA6 LINE L1 5988 6243 -57 5 1281 230 51 51 0 chr13 91306254 91306293 -28978019 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 5 1281 256 333 23 31 chr13 91306671 91306801 -28977511 + B4A SINE B4 106 234 -58 5 1281 305 274 44 59 chr13 91306816 91306952 -28977360 + L1MEc LINE L1 1023 1156 -5244 4 1281 227 125 42 0 chr13 91308876 91308924 -28975388 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 5 1281 287 278 14 0 chr13 91308957 91309029 -28975283 - ID4_ SINE ID -10 73 1 5 1281 260 307 34 42 chr13 91309281 91309400 -28974912 + B1F1 SINE Alu 3 120 -29 5 1281 180 0 0 0 chr13 91309973 91309993 -28974319 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1281 22 35 0 0 chr13 91310071 91310100 -28974212 + AT_rich Low_complexity Low_complexity 1 29 0 5 1281 53 57 0 0 chr13 91310425 91310513 -28973799 + AT_rich Low_complexity Low_complexity 1 88 0 5 1281 697 256 0 43 chr13 91310513 91310676 -28973636 + RSINE1 SINE B4 10 165 0 5 1281 300 250 8 111 chr13 91311984 91312101 -28972211 - RCHARR1 DNA MER1_type 0 974 870 5 1281 1197 62 0 0 chr13 91312111 91312257 -28972055 - B1_Mus1 SINE Alu -1 147 2 5 1281 632 138 39 107 chr13 91312258 91312436 -28971876 - RCHARR1 DNA MER1_type -97 877 712 5 1281 290 171 28 14 chr13 91312436 91312507 -28971805 + Lx9 LINE L1 7566 7637 -7 5 1281 189 121 0 0 chr13 91312581 91312614 -28971698 + (TTG)n Simple_repeat Simple_repeat 2 34 0 5 1281 185 0 40 0 chr13 91312637 91312662 -28971650 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 5 1281 810 167 0 46 chr13 91312662 91312802 -28971510 - B1_Mm SINE Alu -10 137 4 5 1281 497 277 28 28 chr13 91312857 91313002 -28971310 - RSINE1 SINE B4 -20 145 1 5 1281 804 257 19 130 chr13 91315017 91315393 -28968919 - MTEa LTR MaLR -45 334 1 5 1281 383 352 140 14 chr13 91315402 91315889 -28968423 - L2 LINE L2 -503 2916 2369 5 1281 422 230 25 15 chr13 91315909 91316396 -28967916 + (TG)n Simple_repeat Simple_repeat 1 492 0 5 1281 227 304 71 36 chr13 91316396 91316536 -28967776 - L2 LINE L2 -1093 2326 2182 5 1281 342 115 0 0 chr13 91317075 91317127 -28967185 + (GGGA)n Simple_repeat Simple_repeat 2 53 0 5 1281 371 114 86 0 chr13 91317124 91317229 -28967083 + GA-rich Low_complexity Low_complexity 1 114 0 5 1281 21 0 0 0 chr13 91317674 91317695 -28966617 + AT_rich Low_complexity Low_complexity 1 21 0 5 1281 207 204 35 69 chr13 91320144 91320202 -28964110 + MIRc SINE MIR 118 173 -95 5 1281 342 308 60 8 chr13 91321254 91321388 -28962924 + B3A SINE B2 37 177 -21 5 1281 219 36 0 0 chr13 91321391 91321419 -28962893 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1281 1193 68 0 0 chr13 91321468 91321615 -28962697 + B1_Mus1 SINE Alu 2 148 0 5 1281 324 206 55 0 chr13 91321719 91321792 -28962520 + PB1D10 SINE Alu 41 117 0 5 1281 222 236 0 18 chr13 91321879 91321935 -28962377 + (TATATG)n Simple_repeat Simple_repeat 3 57 0 5 1281 313 279 9 55 chr13 91321935 91322045 -28962267 - B4A SINE B4 -4 288 184 5 1281 257 176 0 0 chr13 91322096 91322147 -28962165 - RMER1B Other Other -971 95 45 5 1281 2504 104 25 3 chr13 91322990 91323356 -28960956 + L1_Mus3 LINE L1 6265 6638 0 5 1281 335 287 110 9 chr13 91323510 91323619 -28960693 - PB1D7 SINE Alu 0 120 1 5 1281 393 311 0 83 chr13 91324374 91324507 -28959805 + RSINE1 SINE B4 41 162 -3 5 1281 267 191 68 0 chr13 91324614 91324686 -28959626 - B1F1 SINE Alu -1 116 41 5 1281 2722 166 199 7 chr13 91324775 91325382 -28958930 - RMER19B LTR ERVK 0 902 179 5 1281 309 149 0 2 chr13 91325378 91325447 -28958865 - RMER19B LTR ERVK -543 68 1 5 1281 333 0 0 0 chr13 91325935 91325972 -28958340 + (TC)n Simple_repeat Simple_repeat 2 38 0 5 1281 243 0 0 0 chr13 91325972 91325998 -28958314 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1281 441 266 73 59 chr13 91326040 91326176 -28958136 - RSINE1 SINE B4 -22 143 6 5 1281 460 316 19 13 chr13 91326280 91326434 -28957878 + RSINE1 SINE B4 3 157 -8 5 1281 756 188 67 27 chr13 91327869 91328093 -28956219 + MER5C DNA MER1_type 80 312 -1 5 1281 726 234 32 60 chr13 91329174 91329392 -28954920 + B3 SINE B2 2 213 -3 5 1281 380 278 76 41 chr13 91329412 91329576 -28954736 + B3A SINE B2 31 184 -14 5 1281 408 280 11 0 chr13 91329832 91329925 -28954387 - PB1D10 SINE Alu -23 94 1 5 1281 549 280 78 17 chr13 91330046 91330340 -28953972 - L1MB3 LINE L1 -56 6127 5816 5 1281 359 291 40 101 chr13 91330365 91330514 -28953798 - RSINE1 SINE B4 0 165 26 5 1281 335 283 177 0 chr13 91330516 91330629 -28953683 - B1F1 SINE Alu -16 133 1 5 1281 25 51 0 0 chr13 91330632 91330671 -28953641 + AT_rich Low_complexity Low_complexity 1 39 0 5 1281 323 244 64 0 chr13 91330732 91330810 -28953502 - B1F SINE Alu -29 120 38 5 1281 339 321 0 0 chr13 91331006 91331112 -28953200 - Tigger5 DNA MER2_type -10 2396 2291 5 1281 456 270 117 0 chr13 91331126 91331289 -28953023 - Tigger5 DNA MER2_type -2221 185 4 5 1281 341 193 36 0 chr13 91331291 91331374 -28952938 - Tigger7 DNA MER2_type -88 2403 2318 5 1281 1947 264 114 10 chr13 91331603 91332296 -28952016 + RCHARR1 DNA MER1_type 40 804 -170 5 1281 666 208 7 34 chr13 91332299 91332448 -28951864 + B1_Mur1 SINE Alu 2 146 -3 5 1281 255 295 42 131 chr13 91332304 91332472 -28951840 + B4A SINE B4 92 244 -48 5 1281 278 244 62 150 chr13 91332516 91332709 -28951603 + RCHARR1 DNA MER1_type 798 973 -1 5 1281 330 302 52 0 chr13 91334216 91334331 -28949981 + B1F SINE Alu 12 136 -13 5 1281 406 330 209 21 chr13 91334353 91334818 -28949494 - L2 LINE L2 -362 3057 2506 5 1281 284 207 26 39 chr13 91334922 91335008 -28949304 - LTR48 LTR ERV1 -11 776 701 5 1281 1335 96 21 0 chr13 91335323 91335511 -28948801 + B2_Mm1t SINE B2 2 193 0 5 1281 182 337 23 0 chr13 91335606 91335692 -28948620 - L2 LINE L2 -1013 2406 2319 5 1281 290 274 173 5 chr13 91335858 91336049 -28948263 + RMER20B LTR ERVK 141 363 -264 5 1281 244 269 75 8 chr13 91336198 91336318 -28947994 - L2 LINE L2 -1158 2261 2134 5 1281 2706 173 79 24 chr13 91337794 91338339 -28945973 + RMER15 LTR ERVL 1 575 0 5 1281 229 196 19 19 chr13 91338448 91338500 -28945812 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1281 1043 263 61 35 chr13 91339429 91339775 -28944537 + ORR1E LTR MaLR 1 355 -4 5 1281 291 310 10 20 chr13 91339896 91339998 -28944314 + PB1 SINE Alu 25 125 -2 5 1281 22 56 0 0 chr13 91340101 91340137 -28944175 + AT_rich Low_complexity Low_complexity 1 36 0 5 1281 671 294 6 0 chr13 91340167 91340337 -28943975 - B3A SINE B2 -27 171 1 5 1281 1485 49 5 11 chr13 91340378 91340564 -28943748 + B2_Mm1a SINE B2 2 186 -7 5 1281 339 211 0 0 chr13 91340697 91340768 -28943544 + L1MB2 LINE L1 5850 5920 -251 5 1281 35 24 0 0 chr13 91340912 91340954 -28943358 + AT_rich Low_complexity Low_complexity 1 42 0 5 1281 493 202 9 27 chr13 91341135 91341247 -28943065 + L1MC5 LINE L1 7822 7931 -30 5 1281 303 28 0 0 chr13 91341555 91341591 -28942721 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 5 1281 460 279 16 16 chr13 91341600 91341724 -28942588 - B1F1 SINE Alu -2 147 24 5 1281 21 36 0 0 chr13 91341736 91341764 -28942548 + AT_rich Low_complexity Low_complexity 1 28 0 5 1281 642 257 14 0 chr13 91341925 91342065 -28942247 + ID_B1 SINE B4 75 216 -8 5 1281 392 320 0 0 chr13 91342262 91342387 -28941925 + B4A SINE B4 58 182 -110 5 1281 279 300 0 22 chr13 91342875 91342967 -28941345 + B4A SINE B4 203 292 0 5 1281 234 0 0 0 chr13 91343057 91343083 -28941229 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 5 1281 274 296 42 42 chr13 91344250 91344370 -28939942 + MER102a DNA MER1_type 39 158 -172 5 1281 556 272 0 8 chr13 91344924 91345050 -28939262 + ID_B1 SINE B4 93 217 -7 5 1281 339 113 0 0 chr13 91345534 91345587 -28938725 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 5 1281 296 306 0 0 chr13 91346508 91346580 -28937732 + (TTA)n Simple_repeat Simple_repeat 2 73 0 5 1281 3107 77 16 5 chr13 91346624 91347055 -28937257 + Lx3B LINE L1 6535 6970 -3 5 1281 594 129 284 0 chr13 91347105 91347246 -28937066 - URR1A DNA MER1_type -41 185 5 5 1281 324 254 23 123 chr13 91347288 91347418 -28936894 + PB1D10 SINE Alu 1 117 0 5 1281 328 311 65 32 chr13 91347451 91347697 -28936615 + MamRep434 DNA TcMar 169 422 -4 5 1281 282 285 64 21 chr13 91347753 91347893 -28936419 + B1F SINE Alu 1 146 -3 5 1281 186 43 0 0 chr13 91348046 91348069 -28936243 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5 1281 248 267 0 0 chr13 91348290 91348350 -28935962 - ID4_ SINE ID 0 83 24 5 1281 392 266 111 16 chr13 91349704 91349830 -28934482 + ID_B1 SINE B4 84 221 -3 5 1281 394 245 6 53 chr13 91349954 91350079 -28934233 - B1F SINE Alu 0 149 1 5 1281 613 245 0 53 chr13 91350111 91350262 -28934050 - B1F2 SINE Alu -2 147 5 5 1281 1161 82 0 0 chr13 91351852 91351999 -28932313 + B1_Mus1 SINE Alu 2 148 0 5 1281 472 304 22 0 chr13 91352474 91352609 -28931703 - B1F1 SINE Alu -7 142 5 5 1281 512 167 36 27 chr13 91353200 91353311 -28931001 + PB1D9 SINE Alu 9 120 0 5 1281 21 0 0 0 chr13 91353311 91353332 -28930980 + AT_rich Low_complexity Low_complexity 1 21 0 5 1281 1229 48 0 0 chr13 91353374 91353521 -28930791 + B1_Mus2 SINE Alu 1 147 0 5 1281 195 69 0 0 chr13 91353524 91353553 -28930759 + (TAA)n Simple_repeat Simple_repeat 2 30 0 5 1281 423 289 15 7 chr13 91354130 91354266 -28930046 - B1F SINE Alu -10 139 3 5 1281 571 202 93 0 chr13 91354275 91354404 -28929908 + ID_B1 SINE B4 84 224 0 5 1281 363 243 15 122 chr13 91354496 91354627 -28929685 + PB1D10 SINE Alu 1 117 0 5 1281 194 150 25 0 chr13 91354828 91354868 -28929444 + CT-rich Low_complexity Low_complexity 4 44 0 5 1281 180 0 0 0 chr13 91355148 91355168 -28929144 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1281 224 379 35 0 chr13 91355704 91355791 -28928521 + PB1 SINE Alu 1 90 -37 6 1281 1326 113 0 10 chr13 91355977 91356174 -28928138 + B2_Mm2 SINE B2 1 195 0 6 1281 488 101 25 0 chr13 91356174 91356253 -28928059 + (GGAA)n Simple_repeat Simple_repeat 4 84 0 6 1282 1688 125 12 62 chr13 91357230 91357555 -28926757 - ORR1A4 LTR MaLR -3 326 18 6 1282 261 352 0 28 chr13 91357581 91357689 -28926623 + PB1D10 SINE Alu 11 115 -2 6 1282 714 33 0 0 chr13 91357731 91357822 -28926490 + B2_Mm1t SINE B2 1 91 -102 6 1282 23 33 0 0 chr13 91357828 91357858 -28926454 + AT_rich Low_complexity Low_complexity 1 30 0 6 1282 35 0 0 0 chr13 91357907 91357942 -28926370 + AT_rich Low_complexity Low_complexity 1 35 0 6 1282 250 224 97 52 chr13 91358032 91358167 -28926145 + B1F SINE Alu 3 141 -8 6 1282 1264 40 0 0 chr13 91358415 91358563 -28925749 + B1_Mus1 SINE Alu 1 148 0 6 1282 258 105 0 0 chr13 91358692 91358730 -28925582 + (CATG)n Simple_repeat Simple_repeat 2 39 0 6 1282 597 268 62 0 chr13 91358939 91359118 -28925194 + B3A SINE B2 1 190 -8 6 1282 198 103 0 0 chr13 91359382 91359411 -28924901 + (CACCAT)n Simple_repeat Simple_repeat 5 33 0 6 1282 787 287 75 42 chr13 91359565 91359925 -28924387 - MER57E1 LTR ERV1 0 372 1 6 1282 187 244 0 0 chr13 91359955 91359996 -28924316 + L4 LINE RTE 1781 1821 -208 6 1282 183 288 138 0 chr13 91361084 91361164 -28923148 - MIR SINE MIR -77 185 95 6 1282 259 200 77 0 chr13 91361916 91361981 -28922331 + PB1D10 SINE Alu 48 117 0 6 1282 585 260 89 39 chr13 91361984 91362186 -28922126 + ID_B1 SINE B4 6 205 -87 6 1282 213 257 36 84 chr13 91362345 91362469 -28921843 - PB1D7 SINE Alu 0 120 3 6 1282 368 250 45 27 chr13 91362935 91363046 -28921266 + PB1D10 SINE Alu 4 116 -1 6 1282 210 37 0 0 chr13 91363062 91363089 -28921223 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 6 1282 207 114 0 0 chr13 91363581 91363616 -28920696 + (CGGGG)n Simple_repeat Simple_repeat 1 35 0 6 1282 272 188 31 0 chr13 91364275 91364339 -28919973 + L1MC4a LINE L1 7813 7878 -4 6 1282 23 0 0 0 chr13 91364638 91364661 -28919651 + AT_rich Low_complexity Low_complexity 1 23 0 6 1282 226 229 131 0 chr13 91364668 91364729 -28919583 - B1_Mus1 SINE Alu -56 92 24 6 1282 347 265 46 64 chr13 91364797 91364906 -28919406 + B1F SINE Alu 5 111 -38 6 1282 1194 54 0 7 chr13 91365708 91365846 -28918466 + B1_Mus1 SINE Alu 1 138 -10 6 1282 450 0 0 0 chr13 91365846 91365896 -28918416 + (TAA)n Simple_repeat Simple_repeat 2 51 0 6 1282 2017 104 12 51 chr13 91366296 91366629 -28917683 - RLTRETN_Mm LTR ERVK -2 320 1 6 1282 292 176 25 86 chr13 91366662 91366743 -28917569 - B1F SINE Alu -33 116 41 6 1282 1280 41 0 0 chr13 91367037 91367184 -28917128 + B1_Mm SINE Alu 1 147 0 6 1282 264 143 0 0 chr13 91367186 91367242 -28917070 + (A)n Simple_repeat Simple_repeat 1 56 0 6 1282 405 0 0 0 chr13 91367614 91367659 -28916653 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1282 693 287 16 74 chr13 91368416 91368672 -28915640 - MamRep137 DNA TcMar? -195 249 9 6 1282 189 297 101 73 chr13 91368810 91368919 -28915393 - L2 LINE L2 -1367 2052 1941 6 1282 1468 108 0 110 chr13 91369176 91369477 -28914835 + ORR1A4 LTR MaLR 1 268 -61 6 1282 2944 15 0 0 chr13 91369478 91369810 -28914502 + L1Md_A LINE L1 6251 6582 0 6 1282 427 143 0 0 chr13 91369821 91369884 -28914428 + Lx2A LINE L1 6460 6522 -486 6 1282 3646 118 32 9 chr13 91369884 91370442 -28913870 + Lx2A1 LINE L1 6433 7003 -5 6 1282 336 146 0 0 chr13 91370457 91370512 -28913800 + ORR1A4 LTR MaLR 275 329 0 6 1282 2245 162 8 8 chr13 91371365 91371763 -28912549 + MTB_Mm LTR MaLR 2 399 -8 6 1282 1675 120 184 7 chr13 91373097 91373375 -28910937 - ORR1A4 LTR MaLR -2 327 1 6 1282 4259 179 67 51 chr13 91373507 91374432 -28909880 + MYSERV6-int LTR ERVK 5023 5962 -2997 6 1282 241 354 26 34 chr13 91375056 91375173 -28909139 - L2a LINE L2 0 3426 3311 6 1282 526 227 141 0 chr13 91375217 91375345 -28908967 + RSINE1 SINE B4 3 148 -17 6 1282 220 306 69 0 chr13 91375412 91375484 -28908828 - ID4_ SINE ID 0 83 7 6 1282 857 158 0 6 chr13 91375606 91375765 -28908547 + GA-rich Low_complexity Low_complexity 4 161 0 6 1282 1273 114 16 5 chr13 91376413 91376598 -28907714 - B2_Mm2 SINE B2 -7 188 2 6 1282 262 167 141 70 chr13 91376599 91376670 -28907642 - B4A SINE B4 -216 76 1 6 1282 539 262 32 0 chr13 91376960 91377086 -28907226 + RSINE1 SINE B4 12 141 -24 6 1282 620 191 89 30 chr13 91377147 91377282 -28907030 + B1_Mur1 SINE Alu 7 149 0 6 1282 25 31 0 0 chr13 91377347 91377379 -28906933 + AT_rich Low_complexity Low_complexity 1 32 0 6 1282 431 292 9 0 chr13 91377501 91377607 -28906705 - ID_B1 SINE B4 -35 189 83 6 1282 21 0 0 0 chr13 91377652 91377673 -28906639 + AT_rich Low_complexity Low_complexity 1 21 0 6 1282 342 0 0 0 chr13 91378095 91378133 -28906179 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1282 5046 197 27 27 chr13 91378683 91379705 -28904607 + Lx5 LINE L1 5861 6882 -168 6 1282 715 219 12 0 chr13 91379784 91379953 -28904359 + Lx5 LINE L1 6869 7039 -11 6 1282 22 35 0 0 chr13 91379953 91379982 -28904330 + AT_rich Low_complexity Low_complexity 1 29 0 6 1282 231 315 118 11 chr13 91380280 91380373 -28903939 - PB1D10 SINE Alu -3 114 12 6 1282 1903 193 41 0 chr13 91380460 91380823 -28903489 + ORR1C1 LTR MaLR 1 378 0 6 1282 4887 223 80 50 chr13 91380823 91381958 -28902354 + ORR1C1-int LTR MaLR 1 1196 -174 6 1282 3417 51 2 11 chr13 91381958 91382392 -28901920 - L1_Mus1 LINE L1 0 6567 6138 6 1282 4887 223 80 50 chr13 91382392 91382586 -28901726 + ORR1C1-int LTR MaLR 1197 1370 0 6 1282 1598 144 159 3 chr13 91382587 91382908 -28901404 + ORR1C1 LTR MaLR 8 378 0 6 1282 2324 151 15 18 chr13 91383508 91383900 -28900412 + ORR1B1 LTR MaLR 4 394 0 6 1282 290 67 22 0 chr13 91384329 91384374 -28899938 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 1282 1337 172 96 39 chr13 91384374 91384719 -28899593 - MT2A LTR ERVL -61 523 1 6 1282 363 350 163 10 chr13 91384932 91385219 -28899093 + MLT1G1 LTR MaLR 1 330 -265 6 1282 21 0 0 0 chr13 91385328 91385349 -28898963 + AT_rich Low_complexity Low_complexity 1 21 0 6 1282 228 344 59 81 chr13 91386697 91386833 -28897479 - MER58A DNA MER1_type -82 142 10 6 1282 3625 108 78 36 chr13 91386833 91387410 -28896902 - MT2B LTR ERVL 0 601 1 6 1282 537 68 0 0 chr13 91387431 91387505 -28896807 + (TG)n Simple_repeat Simple_repeat 2 75 0 6 1282 322 308 59 15 chr13 91387768 91387903 -28896409 + B1F1 SINE Alu 1 141 -8 6 1282 285 312 103 11 chr13 91388015 91388190 -28896122 - L1MCc LINE L1 -6139 284 94 6 1282 547 245 74 70 chr13 91388282 91388594 -28895718 - RMER10A LTR ERVL 0 442 130 6 1282 3033 79 145 6 chr13 91389066 91389471 -28894841 - MT2B2 LTR ERVL -2 582 106 6 1282 2581 117 16 31 chr13 91389471 91389652 -28894660 + BGLII LTR ERVK 3 184 -237 6 1282 462 36 0 0 chr13 91389652 91389708 -28894604 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1282 2581 117 16 31 chr13 91389708 91389950 -28894362 + BGLII LTR ERVK 185 420 -1 6 1282 3033 79 145 6 chr13 91389950 91390055 -28894257 - MT2B2 LTR ERVL -479 105 1 6 1282 223 228 18 0 chr13 91390320 91390377 -28893935 - L4 LINE RTE -1700 329 272 6 1282 387 283 22 137 chr13 91390420 91390698 -28893614 - L2c LINE L2 -47 3340 3095 6 1282 324 286 86 26 chr13 91390778 91390929 -28893383 + L2c LINE L2 3193 3352 -35 6 1282 341 268 83 71 chr13 91391504 91391673 -28892639 - MER5A DNA MER1_type 0 189 19 6 1282 1696 21 0 15 chr13 91391821 91392016 -28892296 + B2_Mm1a SINE B2 2 193 0 6 1282 389 329 154 6 chr13 91392084 91392240 -28892072 - B3A SINE B2 -18 180 2 6 1282 501 287 15 23 chr13 91392372 91392504 -28891808 + RSINE1 SINE B4 4 134 -31 6 1282 338 292 10 0 chr13 91392606 91392702 -28891610 + PB1D10 SINE Alu 11 107 -10 6 1282 246 330 73 0 chr13 91392764 91392873 -28891439 - PB1D9 SINE Alu 0 120 4 6 1282 223 343 29 31 chr13 91392897 91393044 -28891268 + MIRb SINE MIR 15 162 -100 6 1282 1220 255 70 34 chr13 91393044 91393401 -28890911 - ORR1D2 LTR MaLR 0 370 1 6 1282 202 355 11 75 chr13 91393401 91393518 -28890794 + MIR SINE MIR 163 262 0 6 1282 396 0 0 0 chr13 91393529 91393573 -28890739 + (TTA)n Simple_repeat Simple_repeat 2 45 0 6 1282 201 175 0 0 chr13 91393573 91393613 -28890699 + (TGG)n Simple_repeat Simple_repeat 2 41 0 6 1282 4415 22 0 0 chr13 91393725 91394218 -28890094 + MT2_Mm LTR ERVL 1 493 0 6 1282 435 281 49 67 chr13 91394265 91394532 -28889780 + MER2 DNA MER2_type 83 344 -1 6 1282 37314 42 1 2 chr13 91394567 91399124 -28885188 - L1Md_F LINE L1 -131 5752 1203 6 1282 5678 103 2 23 chr13 91399127 91399984 -28884328 - L1Md_F LINE L1 -5386 1230 392 6 1282 198 0 0 0 chr13 91400513 91400535 -28883777 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 6 1282 237 315 108 11 chr13 91402977 91403070 -28881242 + PB1D10 SINE Alu 10 111 -6 6 1282 1510 165 29 0 chr13 91403147 91403420 -28880892 + ORR1A3 LTR MaLR 5 285 -41 6 1282 264 64 213 0 chr13 91403466 91403513 -28880799 + ORR1A3 LTR MaLR 270 326 0 6 1282 216 167 0 0 chr13 91403941 91403989 -28880323 + (TGAA)n Simple_repeat Simple_repeat 1 48 0 6 1282 288 53 0 0 chr13 91404049 91404087 -28880225 + (GA)n Simple_repeat Simple_repeat 1 38 0 6 1282 2540 167 68 16 chr13 91405092 91405590 -28878722 + RLTR28 LTR ERVL 1 524 0 6 1282 531 0 0 0 chr13 91405759 91405818 -28878494 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1282 618 335 33 11 chr13 91405826 91406098 -28878214 - B4A SINE B4 -12 280 3 6 1282 2342 111 91 3 chr13 91406739 91407101 -28877211 - ORR1B1 LTR MaLR 0 394 1 6 1282 312 219 176 152 chr13 91407518 91407733 -28876579 + MER33 DNA MER1_type 12 250 -74 6 1282 1212 68 0 0 chr13 91407733 91407880 -28876432 + B1_Mm SINE Alu 1 147 0 6 1282 312 219 176 152 chr13 91407880 91407960 -28876352 + MER33 DNA MER1_type 251 314 -10 6 1282 2942 109 69 7 chr13 91408022 91408485 -28875827 - Lx LINE L1 -6 6648 6157 7 1282 289 240 46 0 chr13 91409015 91409093 -28875219 + ID4_ SINE ID 16 96 -56 7 1282 451 319 49 60 chr13 91409112 91409379 -28874933 + MLT1B LTR MaLR 127 390 0 7 1282 352 301 0 0 chr13 91409416 91409509 -28874803 - PB1 SINE Alu -14 113 21 7 1282 244 238 32 0 chr13 91409643 91409706 -28874606 + CT-rich Low_complexity Low_complexity 3 67 0 7 1282 406 298 24 24 chr13 91409706 91409833 -28874479 - ID_B1 SINE B4 -21 203 77 7 1282 239 227 0 0 chr13 91409839 91409883 -28874429 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1282 589 315 98 9 chr13 91409954 91410178 -28874134 - B4A SINE B4 -46 246 3 7 1282 2904 126 42 31 chr13 91410578 91411055 -28873257 + Lx4A LINE L1 6576 7057 -1 7 1282 21 0 0 0 chr13 91411055 91411076 -28873236 + AT_rich Low_complexity Low_complexity 1 21 0 7 1282 560 298 0 0 chr13 91411090 91411221 -28873091 + RSINE1 SINE B4 2 132 -33 7 1282 186 321 48 36 chr13 91411294 91411378 -28872934 - MER5A DNA MER1_type -28 161 77 7 1282 628 114 9 0 chr13 91411423 91411528 -28872784 + URR1A DNA MER1_type 50 155 -71 7 1282 191 128 51 0 chr13 91411531 91411570 -28872742 + CT-rich Low_complexity Low_complexity 4 44 0 7 1282 715 104 9 0 chr13 91411654 91411760 -28872552 - B2_Mm1t SINE B2 -85 108 2 7 1282 546 93 23 0 chr13 91411761 91411847 -28872465 + URR1A DNA MER1_type 138 225 -1 7 1282 1242 54 0 0 chr13 91412688 91412835 -28871477 - B1_Mm SINE Alu 0 147 1 7 1282 262 229 14 14 chr13 91412903 91412974 -28871338 + L1ME3A LINE L1 5904 5974 -199 7 1282 289 221 34 23 chr13 91413033 91413121 -28871191 - Lx9 LINE L1 -25 7619 7531 7 1282 1161 179 11 75 chr13 91413129 91413395 -28870917 + Lx9 LINE L1 6823 7071 -573 7 1282 423 0 0 0 chr13 91413657 91413704 -28870608 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1282 30 27 0 0 chr13 91413770 91413807 -28870505 + AT_rich Low_complexity Low_complexity 1 37 0 7 1282 499 184 11 0 chr13 91414901 91414988 -28869324 + B1_Mur2 SINE Alu 17 104 -45 7 1282 475 311 8 0 chr13 91415154 91415276 -28869036 + PB1 SINE Alu 5 127 0 7 1282 1764 172 66 11 chr13 91415352 91415733 -28868579 + RMER17C LTR ERVK 1 402 -8 7 1282 419 283 0 0 chr13 91415871 91415970 -28868342 + PB1D7 SINE Alu 22 120 0 7 1282 3276 34 37 0 chr13 91415985 91416367 -28867945 - MTA_Mm LTR MaLR 0 396 1 7 1282 2123 131 186 36 chr13 91416501 91416889 -28867423 + RLTR41 LTR ERV1 1 446 0 7 1282 246 95 0 0 chr13 91417401 91417443 -28866869 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 7 1282 249 280 71 53 chr13 91417811 91417924 -28866388 - MLT2B2 LTR ERVL -56 506 392 7 1282 490 311 81 0 chr13 91417963 91418172 -28866140 - MLT2B2 LTR ERVL -289 226 1 7 1282 213 344 10 30 chr13 91418913 91419012 -28865300 - MIRb SINE MIR -107 161 65 7 1282 243 125 0 0 chr13 91419562 91419602 -28864710 + (CA)n Simple_repeat Simple_repeat 1 40 0 7 1282 361 316 0 93 chr13 91419961 91420090 -28864222 - PB1D10 SINE Alu 0 117 1 7 1282 32 43 0 0 chr13 91420394 91420440 -28863872 + AT_rich Low_complexity Low_complexity 1 46 0 7 1282 22 0 0 0 chr13 91420479 91420501 -28863811 + AT_rich Low_complexity Low_complexity 1 22 0 7 1282 330 152 167 0 chr13 91420593 91420659 -28863653 + ID_B1 SINE B4 128 204 -20 7 1282 189 74 0 0 chr13 91420661 91420688 -28863624 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1282 245 350 60 33 chr13 91420732 91420915 -28863397 + ORR1E LTR MaLR 9 196 -163 7 1282 2745 141 118 32 chr13 91421763 91422365 -28861947 - RMER13B LTR ERVK -253 655 2 7 1282 2870 186 72 99 chr13 91422729 91423381 -28860931 + Lx7 LINE L1 6918 7535 -161 7 1282 333 0 0 0 chr13 91423381 91423418 -28860894 + (TTA)n Simple_repeat Simple_repeat 3 39 0 7 1282 2870 186 72 99 chr13 91423418 91423556 -28860756 + Lx7 LINE L1 7536 7687 -9 7 1282 1319 73 44 11 chr13 91423681 91423862 -28860450 - B2_Mm2 SINE B2 -8 187 1 7 1282 3834 183 60 73 chr13 91424217 91425403 -28858909 + RMER1A Other Other 7 1060 -6 7 1282 329 356 0 0 chr13 91425526 91425641 -28858671 - PB1D7 SINE Alu -5 115 1 7 1282 246 62 0 0 chr13 91425661 91425693 -28858619 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 7 1282 212 273 50 76 chr13 91426204 91426323 -28857989 + ID_B1 SINE B4 83 198 -26 7 1282 442 223 58 0 chr13 91426226 91426329 -28857983 + B1_Mur1 SINE Alu 18 126 -23 7 1282 226 0 59 0 chr13 91426335 91426369 -28857943 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 7 1282 324 261 0 43 chr13 91427006 91427098 -28857214 + PB1D10 SINE Alu 23 110 -7 7 1282 845 290 106 18 chr13 91427144 91427530 -28856782 + L1M4 LINE L1 3961 4380 -1766 7 1282 226 245 0 0 chr13 91427515 91427564 -28856748 - L1MB4 LINE L1 -194 5984 5936 7 1282 302 301 87 0 chr13 91427599 91427702 -28856610 - PB1D10 SINE Alu -4 113 2 7 1282 617 248 123 29 chr13 91427746 91427972 -28856340 - L1MB4 LINE L1 -311 5869 5599 7 1282 4826 46 24 16 chr13 91427972 91428589 -28855723 - L1_Mus3 LINE L1 -6 6632 6011 7 1282 617 244 99 37 chr13 91428589 91428704 -28855608 - L1MB4 LINE L1 -576 5598 5483 7 1282 493 275 28 0 chr13 91428722 91428831 -28855481 + B3 SINE B2 1 112 -104 7 1282 254 206 87 14 chr13 91429191 91429260 -28855052 - L1MB4 LINE L1 -1205 4941 4868 7 1282 518 272 136 37 chr13 91429290 91429481 -28854831 - ID_B1 SINE B4 0 224 15 7 1282 558 0 0 0 chr13 91429501 91429563 -28854749 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 1282 23 0 0 0 chr13 91429708 91429731 -28854581 + AT_rich Low_complexity Low_complexity 1 23 0 7 1282 395 208 20 40 chr13 91429883 91430033 -28854279 + T-rich Low_complexity Low_complexity 3 149 0 7 1282 348 405 7 20 chr13 91430596 91430747 -28853565 - B4A SINE B4 -143 149 1 7 1282 309 320 0 0 chr13 91431113 91431210 -28853102 + B1_Mur2 SINE Alu 3 99 -50 7 1282 1029 139 119 0 chr13 91431334 91431535 -28852777 - URR1A DNA MER1_type 0 226 2 7 1282 333 0 0 0 chr13 91431914 91431951 -28852361 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1282 423 98 0 0 chr13 91432046 91432107 -28852205 + (CTTG)n Simple_repeat Simple_repeat 2 62 0 7 1282 355 303 114 0 chr13 91432130 91432262 -28852050 + B1_Mur2 SINE Alu 3 149 0 7 1282 619 311 182 39 chr13 91432398 91432783 -28851529 - MLT2B3 LTR ERVL -114 440 1 7 1282 303 306 70 104 chr13 91432783 91433012 -28851300 - MLT1N2 LTR MaLR -318 244 24 7 1282 2109 214 36 35 chr13 91433323 91433851 -28850461 - RMER19C LTR ERVK 0 611 78 7 1282 364 239 64 9 chr13 91434015 91434125 -28850187 + PB1D10 SINE Alu 1 116 -1 7 1282 518 291 138 7 chr13 91434132 91434189 -28850123 + B4 SINE B4 8 84 -208 7 1282 305 330 16 25 chr13 91434189 91434310 -28850002 + PB1D9 SINE Alu 1 120 0 7 1282 287 91 0 35 chr13 91434320 91434377 -28849935 + (CAAA)n Simple_repeat Simple_repeat 1 55 0 7 1282 261 237 17 0 chr13 91434460 91434519 -28849793 + (CA)n Simple_repeat Simple_repeat 1 60 0 7 1282 666 68 0 0 chr13 91434525 91434613 -28849699 + (GGGA)n Simple_repeat Simple_repeat 3 90 0 7 1282 1208 48 0 0 chr13 91436009 91436156 -28848156 + B1_Mus2 SINE Alu 1 147 0 7 1282 1571 298 88 40 chr13 91437425 91438287 -28846025 - Lx8 LINE L1 -1012 6461 5589 7 1282 204 58 77 55 chr13 91438288 91438379 -28845933 + T-rich Low_complexity Low_complexity 3 95 0 7 1282 1631 267 29 0 chr13 91438410 91438784 -28845528 + Lx8 LINE L1 6485 6869 -604 7 1282 813 301 158 32 chr13 91438829 91439272 -28845040 + Lx8 LINE L1 6970 7468 -5 7 1282 328 241 11 11 chr13 91439304 91439392 -28844920 + PB1D10 SINE Alu 30 117 0 7 1282 568 345 133 18 chr13 91439878 91440262 -28844050 - Lx8 LINE L1 -187 7286 6859 7 1282 274 182 70 10 chr13 91440884 91440984 -28843328 + (TTATA)n Simple_repeat Simple_repeat 5 110 0 7 1282 672 253 26 57 chr13 91442888 91443081 -28841231 + RMER30 DNA MER1_type 9 195 -7 7 1282 1993 203 165 8 chr13 91443441 91443530 -28840782 - RLTR20D LTR ERVK 0 568 466 7 1282 396 0 0 0 chr13 91443530 91443574 -28840738 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1282 2173 203 165 8 chr13 91443574 91443975 -28840337 - RLTR20D LTR ERVK -103 465 2 7 1282 528 122 0 0 chr13 91444042 91444124 -28840188 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 7 1282 245 100 0 24 chr13 91444707 91444748 -28839564 - RLTR20B3 LTR ERVK 0 577 538 7 1282 416 264 139 19 chr13 91444767 91444925 -28839387 - L1M2 LINE L1 -577 5714 5538 7 1282 1654 53 0 0 chr13 91444938 91445128 -28839184 + B2_Mm1a SINE B2 2 191 -2 7 1282 207 337 0 12 chr13 91445200 91445284 -28839028 - MIRc SINE MIR -106 162 80 7 1282 409 295 36 50 chr13 91445461 91445682 -28838630 - Tigger15a DNA TcMar -24 691 474 7 1282 260 298 58 50 chr13 91446302 91446422 -28837890 + RMER15 LTR ERVL 301 421 -154 7 1282 456 318 145 4 chr13 91446524 91446758 -28837554 - MLT2C1 LTR ERVL -125 272 6 7 1282 555 129 30 0 chr13 91446807 91446908 -28837404 - RMER1B Other Other -1 1065 962 7 1282 743 142 17 0 chr13 91446980 91447100 -28837212 + B1_Mur4 SINE Alu 29 150 0 7 1282 380 286 14 0 chr13 91447109 91447249 -28837063 + L1MB7 LINE L1 5293 5434 -740 7 1282 299 301 0 24 chr13 91447256 91447341 -28836971 + ID4 SINE ID 1 83 0 7 1282 744 33 0 0 chr13 91447344 91447435 -28836877 + (CA)n Simple_repeat Simple_repeat 1 91 0 7 1282 1378 85 5 55 chr13 91447459 91447658 -28836654 + B2_Mm1t SINE B2 2 190 -3 7 1282 207 225 0 0 chr13 91447700 91447771 -28836541 + (TG)n Simple_repeat Simple_repeat 2 72 0 7 1282 986 228 163 27 chr13 91447774 91448031 -28836281 - B4 SINE B4 0 292 1 7 1282 974 263 76 38 chr13 91448112 91448384 -28835928 - MLT1A LTR MaLR -12 362 79 7 1282 573 15 0 0 chr13 91448384 91448450 -28835862 + (TC)n Simple_repeat Simple_repeat 2 67 0 7 1282 864 74 182 0 chr13 91448455 91448576 -28835736 - B1_Mus1 SINE Alu -5 143 1 8 1282 974 263 76 38 chr13 91448576 91448641 -28835671 - MLT1A LTR MaLR -300 74 7 7 1282 1441 305 55 6 chr13 91448646 91449174 -28835138 + L1MB7 LINE L1 5527 6080 -104 7 1282 249 57 0 0 chr13 91449754 91449789 -28834523 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 8 1282 675 354 158 7 chr13 91450408 91451017 -28833295 - Tigger13a DNA MER2_type -4 767 67 8 1282 6173 6 0 0 chr13 91451475 91452121 -28832191 + L1Md_A LINE L1 5936 6581 -1 8 1282 197 65 32 0 chr13 91452429 91452460 -28831852 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 1282 338 267 78 0 chr13 91452552 91452642 -28831670 - PB1D10 SINE Alu -16 101 5 8 1282 266 313 87 29 chr13 91454076 91454214 -28830098 - MER5A DNA MER1_type -6 183 38 8 1282 245 29 0 29 chr13 91454622 91454657 -28829655 + (TTA)n Simple_repeat Simple_repeat 2 35 0 8 1282 306 180 0 0 chr13 91454842 91454903 -28829409 + CT-rich Low_complexity Low_complexity 3 63 0 8 1282 305 344 231 0 chr13 91455055 91455250 -28829062 + MIRb SINE MIR 2 245 -23 8 1282 255 331 12 103 chr13 91455986 91456151 -28828161 - Tigger1 DNA MER2_type -1675 743 594 8 1282 300 83 0 0 chr13 91456734 91456782 -28827530 + (T)n Simple_repeat Simple_repeat 1 48 0 8 1282 1292 61 0 0 chr13 91456785 91456932 -28827380 - B1_Mus1 SINE Alu 0 148 2 8 1282 2758 120 203 26 chr13 91456945 91457442 -28826870 + RMER4B LTR ERVK 1 585 0 8 1282 290 263 135 28 chr13 91457453 91457631 -28826681 - L1MC4 LINE L1 -407 7475 7281 8 1282 495 0 0 0 chr13 91457821 91457876 -28826436 + (TATATG)n Simple_repeat Simple_repeat 3 57 0 8 1282 216 0 0 0 chr13 91457927 91457951 -28826361 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 8 1282 430 141 385 0 chr13 91457953 91458031 -28826281 - PB1D9 SINE Alu -11 109 2 8 1282 483 328 16 0 chr13 91458215 91458340 -28825972 - ID_B1 SINE B4 -4 220 94 8 1282 21 71 0 0 chr13 91458358 91458400 -28825912 + AT_rich Low_complexity Low_complexity 1 42 0 8 1282 23 33 0 0 chr13 91458536 91458566 -28825746 + AT_rich Low_complexity Low_complexity 1 30 0 8 1282 586 318 125 47 chr13 91458819 91459331 -28824981 + Tigger13a DNA MER2_type 2 553 -218 8 1282 868 286 119 22 chr13 91459536 91459650 -28824662 - Lx8 LINE L1 -2 7471 7355 8 1282 252 86 0 0 chr13 91459650 91459685 -28824627 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 8 1282 868 286 119 22 chr13 91459685 91459888 -28824424 - Lx8 LINE L1 -119 7354 7123 8 1282 2433 287 81 14 chr13 91459898 91460765 -28823547 - Lx8 LINE L1 -451 7022 6100 8 1282 2939 55 3 3 chr13 91460765 91461110 -28823202 - IAPLTR4 LTR ERVK 0 345 1 8 1282 932 333 85 56 chr13 91461110 91461232 -28823080 - Lx8 LINE L1 -1596 6100 5992 8 1282 184 360 0 11 chr13 91464365 91464455 -28819857 + L2 LINE L2 2795 2883 -536 8 1282 588 65 0 0 chr13 91464694 91464771 -28819541 + (CA)n Simple_repeat Simple_repeat 2 78 0 8 1282 1055 245 85 41 chr13 91464877 91465217 -28819095 - ORR1E LTR MaLR 0 359 5 8 1282 243 88 0 0 chr13 91466879 91466913 -28817399 + (T)n Simple_repeat Simple_repeat 1 34 0 8 1282 1205 81 0 0 chr13 91466913 91467061 -28817251 - B1_Mus1 SINE Alu 0 148 1 8 1282 40495 27 1 7 chr13 91467420 91473598 -28810714 - L1Md_A LINE L1 -3 6579 445 8 1282 356 264 58 0 chr13 91473616 91473703 -28810609 - PB1D10 SINE Alu -9 108 17 8 1282 214 286 131 10 chr13 91473642 91473741 -28810571 - B4A SINE B4 -125 167 57 8 1282 1591 301 41 73 chr13 91473978 91474665 -28809647 - Lx8 LINE L1 -88 7385 6721 8 1282 2050 289 86 33 chr13 91474658 91475529 -28808783 + Lx8 LINE L1 5869 6785 -688 8 1282 2712 276 156 62 chr13 91475536 91475647 -28808665 + L1_Mur3 LINE L1 2124 2231 -3649 8 1282 1495 76 22 0 chr13 91475647 91475831 -28808481 + B2_Mm2 SINE B2 1 188 -7 8 1282 2712 276 156 62 chr13 91475831 91476817 -28807495 + L1_Mur3 LINE L1 2232 3469 -2411 8 1282 1222 68 7 0 chr13 91476817 91476964 -28807348 + B1_Mus1 SINE Alu 1 148 0 8 1282 2712 276 156 62 chr13 91476964 91477157 -28807155 + L1_Mur3 LINE L1 3470 3636 -2244 8 1282 324 0 0 0 chr13 91477157 91477193 -28807119 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 1282 2712 276 156 62 chr13 91477193 91478159 -28806153 + L1_Mur3 LINE L1 3637 4594 -1286 8 1282 3329 255 32 10 chr13 91478160 91478984 -28805328 + Lx8 LINE L1 6291 7132 -341 8 1282 274 203 189 31 chr13 91479004 91479131 -28805181 + Lx8 LINE L1 7299 7445 -28 8 1282 1471 318 61 37 chr13 91479136 91479780 -28804532 + Lx8 LINE L1 6265 6923 -550 8 1282 951 78 0 0 chr13 91479803 91479932 -28804380 + (CGAGG)n Simple_repeat Simple_repeat 4 132 0 8 1282 641 271 176 0 chr13 91479934 91480189 -28804123 + Lx8 LINE L1 7171 7470 -3 8 1282 1452 239 76 16 chr13 91480228 91480610 -28803702 - MTD LTR MaLR -2 417 13 8 1282 1048 191 34 24 chr13 91480672 91480881 -28803431 - URR1A DNA MER1_type -14 212 2 8 1282 1409 241 78 85 chr13 91480881 91480969 -28803343 - MTD-int LTR MaLR -41 1217 1120 8 1282 1263 68 0 0 chr13 91480969 91481116 -28803196 + B1_Mm SINE Alu 1 147 0 8 1282 1409 241 78 85 chr13 91481116 91481581 -28802731 - MTD-int LTR MaLR -139 1119 669 8 1282 1672 246 32 37 chr13 91481577 91482042 -28802270 - MTD-int LTR MaLR -793 465 3 8 1282 1421 258 71 8 chr13 91482043 91482437 -28801875 - MTD LTR MaLR 0 419 1 8 1282 522 292 127 25 chr13 91482455 91482652 -28801660 - MER44B DNA MER2_type -233 317 101 8 1282 1332 224 156 22 chr13 91482670 91482711 -28801601 - MTD LTR MaLR -11 408 358 8 1282 2225 147 49 0 chr13 91482711 91483057 -28801255 + ORR1B2 LTR MaLR 1 363 -4 8 1282 1332 224 156 22 chr13 91483057 91483375 -28800937 - MTD LTR MaLR -62 357 1 8 1282 2955 199 60 123 chr13 91483375 91484253 -28800059 - MTD-int LTR MaLR 0 1258 436 8 1282 503 245 275 5 chr13 91484233 91484426 -28799886 - MTD LTR MaLR -174 245 1 8 1282 391 267 22 0 chr13 91484431 91484521 -28799791 - MER44B DNA MER2_type -453 97 6 8 1282 447 262 17 26 chr13 91484648 91484765 -28799547 - B4A SINE B4 -141 151 3 8 1282 216 0 0 0 chr13 91484838 91484862 -28799450 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1282 1250 22 0 0 chr13 91484864 91484999 -28799313 - B1_Mus2 SINE Alu -12 135 1 8 1282 2398 126 6 3 chr13 91485008 91485334 -28798978 - ORR1A2 LTR MaLR 0 327 1 8 1282 3224 80 57 49 chr13 91485334 91485823 -28798489 - MT2B LTR ERVL -108 493 1 8 1282 366 217 64 57 chr13 91485823 91486007 -28798305 - L1M3 LINE L1 -1354 4786 4606 8 1282 686 254 82 12 chr13 91486013 91486184 -28798128 - B3A SINE B2 -15 183 1 8 1282 448 269 48 18 chr13 91486185 91486388 -28797924 - L1M3 LINE L1 -1503 4637 4406 8 1282 216 283 0 0 chr13 91486388 91486434 -28797878 + polypyrimidine Low_complexity Low_complexity 5 50 0 8 1282 554 242 8 68 chr13 91486507 91486640 -28797672 - ID_B1 SINE B4 -15 209 85 8 1282 794 284 95 31 chr13 91486765 91487133 -28797179 + MLT2B4 LTR ERVL 1 489 -67 8 1282 247 342 114 24 chr13 91487384 91487507 -28796805 + MER5B DNA MER1_type 28 161 -17 8 1282 253 336 113 32 chr13 91487958 91487994 -28796318 + B4 SINE B4 52 148 -144 8 1282 532 237 18 28 chr13 91487994 91488129 -28796183 + B1F SINE Alu 7 146 -1 8 1282 253 336 113 32 chr13 91488129 91488179 -28796133 + B4 SINE B4 149 290 -2 8 160 666 235 0 0 chr13 91488182 91488352 -28795960 + (CA)n Simple_repeat Simple_repeat 2 171 0 8 1283 300 360 94 5 chr13 91490431 91490632 -28793680 - MIRc SINE MIR -2 266 48 8 1283 345 62 0 0 chr13 91491016 91491064 -28793248 + (TC)n Simple_repeat Simple_repeat 2 49 0 8 1283 593 306 119 8 chr13 91491136 91491380 -28792932 - B4A SINE B4 -19 273 3 8 1283 1260 115 33 0 chr13 91492777 91492959 -28791353 - B2_Mm2 SINE B2 -7 188 1 8 1283 986 163 0 0 chr13 91492965 91493112 -28791200 - B1_Mur4 SINE Alu -2 148 2 8 1283 21 57 0 0 chr13 91493764 91493799 -28790513 + AT_rich Low_complexity Low_complexity 1 35 0 8 1283 247 291 0 81 chr13 91495208 91495294 -28789018 + ID4 SINE ID 2 80 -3 8 1283 22 0 0 0 chr13 91495489 91495511 -28788801 + AT_rich Low_complexity Low_complexity 1 22 0 8 1283 1232 69 0 0 chr13 91495511 91495655 -28788657 + B1_Mus1 SINE Alu 2 145 -3 8 1283 1383 77 39 0 chr13 91495659 91495840 -28788472 - B2_Mm2 SINE B2 -7 188 1 8 1283 23 86 0 0 chr13 91495982 91496040 -28788272 + AT_rich Low_complexity Low_complexity 1 58 0 8 1283 966 242 81 100 chr13 91496194 91496565 -28787747 - MTEa LTR MaLR 0 379 16 8 1283 369 0 0 0 chr13 91496609 91496650 -28787662 + (TTTTG)n Simple_repeat Simple_repeat 5 45 0 8 1283 566 218 55 0 chr13 91496650 91496760 -28787552 - B1_Mur1 SINE Alu -13 136 21 8 1283 189 0 0 0 chr13 91497197 91497218 -28787094 + (CAAAA)n Simple_repeat Simple_repeat 4 24 0 8 1283 1323 72 0 0 chr13 91497831 91498011 -28786301 + (TG)n Simple_repeat Simple_repeat 1 180 0 8 1283 231 284 0 149 chr13 91498354 91498441 -28785871 - MLT1L LTR MaLR -479 131 58 8 1283 879 102 0 0 chr13 91498494 91498631 -28785681 + (GAAA)n Simple_repeat Simple_repeat 4 140 0 8 1283 252 348 116 23 chr13 91498800 91499015 -28785297 - L2 LINE L2 -930 2489 2255 8 1283 190 329 27 0 chr13 91500167 91500240 -28784072 - L2 LINE L2 -2421 998 924 1 1283 1203 55 0 7 chr13 91500394 91500542 -28783770 + B1_Mus1 SINE Alu 2 148 0 2 1283 189 0 0 0 chr13 91500939 91500960 -28783352 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1283 417 226 0 81 chr13 91501147 91501258 -28783054 - B4A SINE B4 -68 224 123 4 1283 207 0 0 0 chr13 91502150 91502173 -28782139 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 5 1283 269 244 122 0 chr13 91503722 91503812 -28780500 - PB1D10 SINE Alu -16 101 1 6 1283 594 183 0 0 chr13 91504153 91504322 -28779990 + (TG)n Simple_repeat Simple_repeat 2 170 0 7 1283 714 175 0 0 chr13 91504373 91504550 -28779762 + (TG)n Simple_repeat Simple_repeat 2 178 0 7 1283 315 0 0 0 chr13 91505742 91505777 -28778535 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1283 206 109 30 45 chr13 91506762 91506829 -28777483 + T-rich Low_complexity Low_complexity 2 67 0 9 1283 22 0 0 0 chr13 91507319 91507341 -28776971 + AT_rich Low_complexity Low_complexity 1 22 0 1 1283 25 51 0 0 chr13 91508059 91508098 -28776214 + AT_rich Low_complexity Low_complexity 1 39 0 1 1283 22 35 0 0 chr13 91514651 91514680 -28769632 + AT_rich Low_complexity Low_complexity 1 29 0 1 1283 295 357 64 13 chr13 91515651 91515807 -28768505 - Tigger12c DNA MER2_type -430 304 141 1 1283 923 259 148 76 chr13 91516075 91516325 -28767987 + Lx8 LINE L1 6879 7150 -323 1 1283 1595 129 203 26 chr13 91516325 91516635 -28767677 + ORR1B2 LTR MaLR 3 367 0 1 1283 923 259 148 76 chr13 91516635 91516892 -28767420 + Lx8 LINE L1 7151 7429 -44 1 1283 617 0 0 14 chr13 91516892 91516966 -28767346 + (TTTTG)n Simple_repeat Simple_repeat 3 75 0 1 1283 1092 30 23 0 chr13 91516966 91517098 -28767214 - B1_Mm SINE Alu -11 136 2 1 1283 923 259 148 76 chr13 91517098 91517143 -28767169 + Lx8 LINE L1 7430 7472 -1 1 1283 255 262 165 47 chr13 91517923 91518066 -28766246 + MIRb SINE MIR 1 162 -106 1 1283 467 232 98 41 chr13 91518470 91518649 -28765663 - RMER20B LTR ERVK -109 407 233 1 1283 1230 54 0 0 chr13 91520589 91520737 -28763575 - B1_Mus1 SINE Alu 0 148 1 2 1283 765 0 0 0 chr13 91520963 91521048 -28763264 + (TC)n Simple_repeat Simple_repeat 2 86 0 2 1283 583 159 182 0 chr13 91521048 91521165 -28763147 - B1_Mur3 SINE Alu -8 141 2 2 1283 1068 115 0 7 chr13 91521832 91521843 -28762469 - B1_Mus1 SINE Alu 0 148 138 2 1283 225 0 0 0 chr13 91521843 91521868 -28762444 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2 1283 1068 115 0 7 chr13 91521868 91522005 -28762307 - B1_Mus1 SINE Alu -11 137 1 2 1283 423 0 0 0 chr13 91522016 91522063 -28762249 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1283 1109 300 78 39 chr13 91522086 91522234 -28762078 + L1MB3 LINE L1 5592 5729 -454 2 1283 351 0 0 0 chr13 91522234 91522273 -28762039 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1283 1109 300 78 39 chr13 91522273 91522686 -28761626 + L1MB3 LINE L1 5730 6175 -8 2 1283 327 254 14 0 chr13 91523010 91523081 -28761231 - ID2 SINE ID -10 73 2 2 1283 281 250 151 11 chr13 91523982 91524075 -28760237 - L1MA6 LINE L1 -45 6255 6150 2 1283 218 203 0 45 chr13 91524087 91524154 -28760158 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 1283 628 118 240 16 chr13 91524220 91524341 -28759971 - B1_Mus1 SINE Alu 0 148 1 3 1283 795 181 0 34 chr13 91524604 91524753 -28759559 - B1_Mur1 SINE Alu -1 148 5 3 1283 239 301 14 0 chr13 91524834 91524907 -28759405 + ID4_ SINE ID 2 75 -8 3 1283 212 189 0 19 chr13 91525414 91525468 -28758844 + A-rich Low_complexity Low_complexity 2 54 0 3 1283 367 284 94 7 chr13 91525988 91526137 -28758175 + MER5B DNA MER1_type 15 176 -2 3 1283 300 257 82 26 chr13 91526144 91526267 -28758045 + MIR SINE MIR 33 169 -107 3 1283 306 179 75 0 chr13 91527065 91527132 -28757180 + PB1D10 SINE Alu 45 116 -1 3 1283 333 353 0 8 chr13 91527146 91527263 -28757049 + GA-rich Low_complexity Low_complexity 3 118 0 3 1283 22 56 0 0 chr13 91528495 91528531 -28755781 + AT_rich Low_complexity Low_complexity 1 36 0 3 1283 185 94 0 30 chr13 91528798 91528831 -28755481 + (TCTCCC)n Simple_repeat Simple_repeat 3 34 0 4 1283 210 118 0 0 chr13 91529691 91529725 -28754587 + (TTG)n Simple_repeat Simple_repeat 3 36 0 4 1283 243 0 0 0 chr13 91529725 91529752 -28754560 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1283 950 98 8 0 chr13 91529754 91529887 -28754425 - B1_Mus1 SINE Alu -13 135 2 4 1283 249 234 47 0 chr13 91530223 91530287 -28754025 - MLT1K LTR MaLR -8 587 521 4 1283 382 297 27 9 chr13 91531093 91531205 -28753107 + MER5A DNA MER1_type 16 129 -60 4 1283 195 196 0 0 chr13 91531233 91531261 -28753051 + polypurine Low_complexity Low_complexity 2 29 0 4 1283 246 32 0 0 chr13 91531261 91531292 -28753020 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 4 1283 195 196 0 0 chr13 91531292 91531309 -28753003 + polypurine Low_complexity Low_complexity 30 46 0 4 1283 411 280 77 42 chr13 91531610 91531778 -28752534 + MLT2B1 LTR ERVL 61 234 -286 4 1283 380 270 25 42 chr13 91531797 91532005 -28752307 + MLT2B1 LTR ERVL 385 539 -16 4 1283 892 277 67 46 chr13 91532086 91532457 -28751855 + MTEa LTR MaLR 1 379 0 5 1283 701 12 0 11 chr13 91532968 91533055 -28751257 + (TC)n Simple_repeat Simple_repeat 2 87 0 5 1283 614 284 0 6 chr13 91533081 91533237 -28751075 - RSINE1 SINE B4 0 165 11 5 1283 241 135 0 37 chr13 91533243 91533297 -28751015 + (TTA)n Simple_repeat Simple_repeat 1 52 0 5 1283 209 83 0 27 chr13 91533652 91533658 -28750654 + (TTTG)n Simple_repeat Simple_repeat 4 9 0 5 1283 594 41 0 0 chr13 91533658 91533731 -28750581 + (TGG)n Simple_repeat Simple_repeat 1 73 0 5 1283 209 83 0 27 chr13 91533731 91533761 -28750551 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1283 343 379 73 29 chr13 91534284 91534697 -28749615 + LTR16A LTR ERVL 5 435 -16 5 1283 22 56 0 0 chr13 91534775 91534811 -28749501 + AT_rich Low_complexity Low_complexity 1 36 0 5 1283 684 272 126 4 chr13 91534871 91535140 -28749172 - L1MB1 LINE L1 -50 6118 5817 5 1283 252 125 0 0 chr13 91535272 91535292 -28749020 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1283 1100 81 0 13 chr13 91535292 91535442 -28748870 + B1_Mus1 SINE Alu 1 148 0 6 1283 252 125 0 0 chr13 91535442 91535469 -28748843 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1283 1318 87 43 0 chr13 91535523 91535708 -28748604 + B2_Mm1a SINE B2 1 193 0 6 1283 375 78 0 0 chr13 91535708 91535759 -28748553 + (GA)n Simple_repeat Simple_repeat 2 52 0 6 1283 226 284 15 0 chr13 91536094 91536161 -28748151 - L1MB1 LINE L1 -583 5585 5518 5 1283 213 65 0 0 chr13 91536992 91537023 -28747289 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6 1283 1190 68 0 0 chr13 91537902 91538050 -28746262 + B1_Mus1 SINE Alu 1 148 0 6 1283 234 0 0 0 chr13 91539947 91539973 -28744339 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1283 302 310 20 0 chr13 91540633 91540733 -28743579 + B3 SINE B2 105 206 -10 6 1283 1005 9 0 0 chr13 91542608 91542722 -28741590 + (TTC)n Simple_repeat Simple_repeat 3 116 0 6 1283 351 317 109 5 chr13 91543418 91543602 -28740710 - MIRb SINE MIR -19 249 47 7 1283 248 91 23 0 chr13 91543856 91543900 -28740412 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1283 1155 87 0 0 chr13 91543911 91544072 -28740240 + (TCTCC)n Simple_repeat Simple_repeat 2 162 0 7 1283 702 65 0 0 chr13 91544072 91544164 -28740148 + (TC)n Simple_repeat Simple_repeat 1 92 0 7 1283 1050 44 15 0 chr13 91545018 91545155 -28739157 - B1_Mm SINE Alu 0 147 9 7 1283 245 246 269 31 chr13 91545621 91545751 -28738561 + MER63A DNA AcHobo 21 181 -29 7 1283 362 283 150 37 chr13 91546677 91546691 -28737621 + Charlie1a DNA MER1_type 1065 1080 -375 7 1283 286 202 37 25 chr13 91546691 91546772 -28737540 - ID4 SINE ID 0 83 2 7 1283 362 283 150 37 chr13 91546772 91547051 -28737261 + Charlie1a DNA MER1_type 1081 1391 -64 7 1283 685 323 73 35 chr13 91547282 91547651 -28736661 + MLT2C1 LTR ERVL 5 387 -10 7 1283 252 0 0 0 chr13 91547944 91547972 -28736340 + (TG)n Simple_repeat Simple_repeat 2 29 0 7 1283 204 283 0 0 chr13 91548682 91548742 -28735570 + GA-rich Low_complexity Low_complexity 4 63 0 8 1283 1208 49 0 0 chr13 91549416 91549560 -28734752 - B1_Mm SINE Alu -2 145 2 8 1283 1014 91 0 0 chr13 91550019 91550184 -28734128 + (TC)n Simple_repeat Simple_repeat 2 166 0 8 1283 268 298 53 0 chr13 91550481 91550575 -28733737 + ID_B1 SINE B4 72 170 -54 8 1283 342 0 0 0 chr13 91550678 91550716 -28733596 + (TC)n Simple_repeat Simple_repeat 2 39 0 8 1283 226 217 3 0 chr13 91550943 91550990 -28733322 + MIR SINE MIR 105 153 -55 8 1283 351 65 0 0 chr13 91552031 91552077 -28732235 + (TAA)n Simple_repeat Simple_repeat 1 46 0 8 1283 515 252 38 0 chr13 91555287 91555418 -28728894 + B1F SINE Alu 12 147 -2 8 1283 250 178 11 11 chr13 91555483 91555574 -28728738 + GA-rich Low_complexity Low_complexity 2 92 0 8 1283 275 288 96 36 chr13 91556035 91556123 -28728189 + MIRb SINE MIR 17 107 -161 8 1283 1098 103 0 0 chr13 91556123 91556424 -28727888 + (CA)n Simple_repeat Simple_repeat 1 301 0 9 1283 275 288 96 36 chr13 91556424 91556499 -28727813 + MIRb SINE MIR 108 192 -76 8 1283 657 246 0 7 chr13 91562334 91562469 -28721843 + RSINE1 SINE B4 3 136 -29 9 1283 276 287 112 49 chr13 91562822 91562965 -28721347 + MLT1A0 LTR MaLR 1 152 -213 9 1283 639 126 11 39 chr13 91562965 91563146 -28721166 + (CAGAGA)n Simple_repeat Simple_repeat 4 179 0 9 1283 602 240 128 6 chr13 91563152 91563332 -28720980 + MLT1A0 LTR MaLR 145 346 -19 9 1283 191 296 74 0 chr13 91563692 91563746 -28720566 - MIRb SINE MIR -195 73 16 9 1283 464 216 93 36 chr13 91565071 91565210 -28719102 + B1F2 SINE Alu 1 147 -2 9 1283 204 222 0 0 chr13 91565277 91565313 -28718999 + polypurine Low_complexity Low_complexity 2 37 0 9 1283 432 0 0 0 chr13 91565313 91565361 -28718951 + (GA)n Simple_repeat Simple_repeat 1 48 0 9 1283 499 310 19 101 chr13 91566402 91566718 -28717594 + B4A SINE B4 1 290 -2 9 1283 186 103 0 0 chr13 91566821 91566850 -28717462 + (A)n Simple_repeat Simple_repeat 1 29 0 9 1283 400 281 93 33 chr13 91567815 91567886 -28716426 + ID SINE ID 2 81 -143 1 1283 338 292 57 0 chr13 91567886 91567992 -28716320 + PB1D10 SINE Alu 1 112 -5 1 1283 2284 192 87 42 chr13 91568340 91568889 -28715423 - RMER1B Other Other 0 1066 493 1 1283 185 132 26 0 chr13 91569008 91569046 -28715266 + (CAA)n Simple_repeat Simple_repeat 3 41 0 1 1283 180 0 0 0 chr13 91569445 91569465 -28714847 + (TC)n Simple_repeat Simple_repeat 2 21 0 1 1283 1159 82 0 0 chr13 91569498 91569645 -28714667 - B1_Mm SINE Alu 0 147 1 1 1283 1163 69 7 0 chr13 91569692 91569837 -28714475 + B1_Mus1 SINE Alu 1 146 -2 1 1283 240 0 49 24 chr13 91569842 91569883 -28714429 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1 1283 274 186 0 63 chr13 91570073 91570136 -28714176 + Lx4B LINE L1 6724 6782 -276 1 1283 568 180 11 46 chr13 91570138 91570313 -28713999 + Lx4B LINE L1 6882 7050 -8 1 1283 914 140 12 0 chr13 91570315 91570479 -28713833 + GA-rich Low_complexity Low_complexity 4 169 0 1 1283 251 191 0 0 chr13 91570483 91570525 -28713787 + polypurine Low_complexity Low_complexity 2 43 0 1 1283 220 283 0 0 chr13 91571774 91571834 -28712478 - MIRb SINE MIR -29 239 180 1 1283 671 264 89 49 chr13 91573032 91573358 -28710954 - ORR1E LTR MaLR -20 339 1 1 1283 35 24 0 0 chr13 91573975 91574017 -28710295 + AT_rich Low_complexity Low_complexity 1 42 0 1 1283 247 164 0 18 chr13 91574058 91574114 -28710198 + Lx2 LINE L1 6943 6997 0 1 1283 302 248 76 50 chr13 91574339 91574458 -28709854 + MIRb SINE MIR 47 168 -100 1 1283 239 327 45 18 chr13 91574501 91574613 -28709699 + MIRb SINE MIR 154 268 0 1 1283 320 312 47 47 chr13 91575203 91575351 -28708961 + B1F SINE Alu 1 148 -1 1 1283 279 0 0 0 chr13 91575535 91575566 -28708746 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1283 1091 88 0 0 chr13 91575566 91575703 -28708609 - B1_Mus1 SINE Alu -10 138 2 1 1283 188 345 65 45 chr13 91576028 91576183 -28708129 + L2 LINE L2 2710 2867 -552 1 1283 227 152 0 0 chr13 91576206 91576239 -28708073 + PB1D7 SINE Alu 79 111 -9 1 1283 687 46 0 0 chr13 91576258 91576345 -28707967 + (GA)n Simple_repeat Simple_repeat 1 87 0 1 1283 398 267 57 0 chr13 91576825 91576930 -28707382 + PB1D10 SINE Alu 1 111 -6 1 1283 309 232 98 0 chr13 91577494 91577576 -28706736 + MLT1D LTR MaLR 6 95 -410 1 1283 549 300 75 42 chr13 91577645 91577936 -28706376 + MLT1D LTR MaLR 218 501 -4 1 1283 1174 74 0 0 chr13 91578627 91578775 -28705537 - B1_Mus1 SINE Alu 0 148 1 1 1283 484 264 13 6 chr13 91579073 91579229 -28705083 + MER103 DNA DNA 10 166 0 1 1283 308 295 66 9 chr13 91579601 91579707 -28704605 + PB1D10 SINE Alu 1 112 -5 1 1283 23 0 0 0 chr13 91579714 91579737 -28704575 + AT_rich Low_complexity Low_complexity 1 23 0 1 1283 344 266 42 11 chr13 91579855 91579950 -28704362 - B1F2 SINE Alu -51 98 1 1 1283 1289 107 22 0 chr13 91580218 91580396 -28703916 + B2_Mm2 SINE B2 1 182 -13 1 1283 25 31 0 0 chr13 91580473 91580505 -28703807 + AT_rich Low_complexity Low_complexity 1 32 0 1 1283 1179 42 7 0 chr13 91580552 91580696 -28703616 - B1_Mm SINE Alu 0 147 3 1 1283 369 62 0 0 chr13 91580697 91580745 -28703567 + (TTTTG)n Simple_repeat Simple_repeat 2 49 0 1 1283 26 30 0 0 chr13 91580766 91580799 -28703513 + AT_rich Low_complexity Low_complexity 1 33 0 1 1283 267 286 0 0 chr13 91580828 91580933 -28703379 + (TG)n Simple_repeat Simple_repeat 1 105 0 1 1283 357 191 198 21 chr13 91580933 91581029 -28703283 - RSINE1 SINE B4 0 165 53 1 1283 1407 212 47 15 chr13 91581047 91581386 -28702926 + ORR1D1 LTR MaLR 25 374 0 1 1283 339 244 50 50 chr13 91581508 91581629 -28702683 - RMER30 DNA MER1_type -1 201 81 1 1283 245 299 0 0 chr13 91581629 91581696 -28702616 + (TG)n Simple_repeat Simple_repeat 2 68 0 1 1283 233 217 0 0 chr13 91581754 91581800 -28702512 - RMER30 DNA MER1_type -149 53 8 1 1283 1965 190 58 0 chr13 91582106 91582469 -28701843 - ORR1C2 LTR MaLR 0 384 1 1 1283 285 197 0 0 chr13 91584375 91584446 -28699866 + T-rich Low_complexity Low_complexity 2 72 0 1 1283 371 365 87 50 chr13 91584446 91584769 -28699543 + MLT1N2 LTR MaLR 19 353 -209 1 1283 231 167 0 0 chr13 91585182 91585224 -28699088 + GA-rich Low_complexity Low_complexity 2 43 0 1 1283 1006 225 101 22 chr13 91585251 91585519 -28698793 + B4A SINE B4 4 292 0 1 1283 408 340 6 48 chr13 91587316 91587483 -28696829 + RSINE1 SINE B4 2 161 -4 1 1283 501 17 0 0 chr13 91589033 91589091 -28695221 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1283 378 330 15 29 chr13 91589244 91589450 -28694862 - MIRb SINE MIR -13 255 53 1 1283 290 229 69 0 chr13 91590290 91590392 -28693920 - L2a LINE L2 -238 3137 3022 1 1283 676 62 35 0 chr13 91591709 91591822 -28692490 + (TCTCTG)n Simple_repeat Simple_repeat 4 120 0 1 1283 1061 106 0 0 chr13 91591825 91591967 -28692345 - B1_Mus1 SINE Alu -5 143 2 1 1283 604 288 18 49 chr13 91592381 91592604 -28691708 + ID_B1 SINE B4 9 224 0 1 1283 213 217 0 21 chr13 91593796 91593843 -28690469 + CT-rich Low_complexity Low_complexity 1 46 0 1 1283 1004 110 43 0 chr13 91593843 91594006 -28690306 + BGLII_A LTR ERVK 276 445 0 1 1283 867 274 29 0 chr13 91594246 91594454 -28689858 - ID_B1 SINE B4 -9 215 2 1 1283 297 0 0 0 chr13 91594823 91594856 -28689456 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1283 588 293 46 7 chr13 91595136 91595287 -28689025 + B3A SINE B2 12 168 -30 1 1283 539 97 43 0 chr13 91596064 91596157 -28688155 - L1_Mus3 LINE L1 0 6638 6542 1 1283 207 0 0 0 chr13 91596190 91596213 -28688099 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1 1283 310 91 0 35 chr13 91596814 91596871 -28687441 + (TTTC)n Simple_repeat Simple_repeat 3 57 0 1 1283 941 62 131 0 chr13 91596871 91597001 -28687311 - B1_Mus2 SINE Alu 0 147 1 1 1283 38 0 0 0 chr13 91600368 91600406 -28683906 + GC_rich Low_complexity Low_complexity 1 38 0 1 1283 412 132 33 0 chr13 91600477 91600568 -28683744 + GA-rich Low_complexity Low_complexity 1 94 0 1 1283 47 104 0 0 chr13 91600941 91601114 -28683198 + GC_rich Low_complexity Low_complexity 1 173 0 1 1283 316 234 17 40 chr13 91601206 91601380 -28682932 + (CGGGG)n Simple_repeat Simple_repeat 2 171 0 1 1283 243 0 0 0 chr13 91602300 91602327 -28681985 + (CAA)n Simple_repeat Simple_repeat 3 29 0 1 1283 188 0 0 69 chr13 91603838 91603867 -28680445 + (TTTTTG)n Simple_repeat Simple_repeat 4 30 0 1 1283 24 0 0 0 chr13 91604011 91604035 -28680277 + AT_rich Low_complexity Low_complexity 1 24 0 1 1283 193 376 65 0 chr13 91604130 91604300 -28680012 - MIRb SINE MIR -69 199 19 1 1283 580 212 22 14 chr13 91604706 91604845 -28679467 - ID_B1 SINE B4 -18 206 67 1 1283 181 0 0 65 chr13 91605573 91605604 -28678708 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1283 837 168 0 14 chr13 91605639 91605778 -28678534 - B1_Mur1 SINE Alu -11 138 2 1 1283 1162 68 0 7 chr13 91606301 91606449 -28677863 - B1_Mus1 SINE Alu 0 148 2 1 1283 615 62 0 0 chr13 91607167 91607247 -28677065 + (TTTC)n Simple_repeat Simple_repeat 3 82 0 1 1283 884 69 188 0 chr13 91607252 91607396 -28676916 - B2_Mm2 SINE B2 -23 172 2 1 1283 956 259 41 11 chr13 91609037 91609303 -28675009 + B4 SINE B4 1 274 -18 1 1283 342 0 0 0 chr13 91609314 91609352 -28674960 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1283 3413 268 72 34 chr13 91609766 91610958 -28673354 - Lx7 LINE L1 -1 7472 6299 1 1283 356 305 29 0 chr13 91611048 91611153 -28673159 - PB1D10 SINE Alu -6 111 4 1 1283 482 261 42 24 chr13 91611414 91611579 -28672733 - ORR1E LTR MaLR -172 187 20 1 1283 1017 230 50 15 chr13 91611642 91611931 -28672381 - L1MB3 LINE L1 0 6183 5878 1 1283 315 312 94 19 chr13 91611935 91612095 -28672217 - MIRb SINE MIR -77 191 20 1 1283 382 296 66 66 chr13 91613151 91613364 -28670948 - LTR33 LTR ERVL -107 408 196 1 1283 539 294 90 35 chr13 91614020 91614221 -28670091 - MER2 DNA MER2_type -30 315 104 1 1283 286 280 0 9 chr13 91615007 91615115 -28669197 - L1ME3A LINE L1 -17 6156 6050 1 1283 419 135 71 150 chr13 91615550 91615663 -28668649 - PB1D9 SINE Alu -14 106 3 1 1283 1924 121 341 5 chr13 91616224 91616632 -28667680 + RMER15 LTR ERVL 9 553 -22 1 1283 343 215 30 15 chr13 91616965 91617031 -28667281 - ID4 SINE ID -15 68 2 1 1283 1417 65 16 16 chr13 91617076 91617263 -28667049 - B2_Mm2 SINE B2 -8 187 1 1 1283 316 178 192 0 chr13 91617320 91617393 -28666919 + ID_B1 SINE B4 127 213 -11 1 1283 311 264 34 11 chr13 91617661 91617749 -28666563 - L2a LINE L2 0 3426 3337 1 1283 456 19 0 0 chr13 91617859 91617912 -28666400 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1283 27 73 0 0 chr13 91618457 91618512 -28665800 + AT_rich Low_complexity Low_complexity 1 55 0 1 1283 302 93 19 0 chr13 91619046 91619100 -28665212 + Lx2B LINE L1 6941 6995 -5 1 1284 752 85 246 0 chr13 91620246 91620364 -28663948 - B1_Mus1 SINE Alu 0 148 2 1 1284 24 0 0 0 chr13 91620618 91620642 -28663670 + AT_rich Low_complexity Low_complexity 1 24 0 1 1284 1245 118 11 0 chr13 91620907 91621094 -28663218 - B2_Mm1t SINE B2 -4 189 1 1 1284 352 219 0 14 chr13 91622777 91622851 -28661461 + Tigger15a DNA TcMar 640 712 -3 1 1284 765 159 0 61 chr13 91623784 91623931 -28660381 + B1_Mur2 SINE Alu 12 149 0 1 1284 450 0 0 0 chr13 91624564 91624614 -28659698 + (TTTTA)n Simple_repeat Simple_repeat 2 51 0 1 1284 530 246 36 29 chr13 91624618 91624756 -28659556 - B3 SINE B2 -20 196 58 1 1284 203 182 0 22 chr13 91624899 91624944 -28659368 + (TTTG)n Simple_repeat Simple_repeat 4 47 0 2 1284 561 274 0 29 chr13 91624952 91625091 -28659221 - RSINE1 SINE B4 -1 164 30 2 1284 273 301 138 65 chr13 91625198 91625543 -28658769 + L2a LINE L2 3033 3414 -12 2 1284 236 261 104 0 chr13 91625699 91625814 -28658498 - L1M5 LINE L1 -1023 5123 4997 2 1284 476 281 152 24 chr13 91625937 91626101 -28658211 - B3A SINE B2 -10 185 1 2 1284 1202 61 0 0 chr13 91626208 91626355 -28657957 - B1_Mus2 SINE Alu 0 147 1 2 1284 610 232 61 22 chr13 91626442 91626623 -28657689 - B3A SINE B2 0 198 11 2 1284 1155 75 7 0 chr13 91627133 91627280 -28657032 + B1_Mus1 SINE Alu 1 148 0 2 1284 211 182 0 0 chr13 91627595 91627628 -28656684 + polypurine Low_complexity Low_complexity 3 35 0 2 1284 432 261 202 11 chr13 91628097 91628275 -28656037 + MER74A LTR ERVL 15 226 -332 2 1284 22 35 0 0 chr13 91628561 91628590 -28655722 + AT_rich Low_complexity Low_complexity 1 29 0 2 1284 466 256 43 80 chr13 91630010 91630286 -28654026 - Lx9 LINE L1 -22 7622 7357 2 1284 916 239 66 76 chr13 91630377 91630758 -28653554 - Lx9 LINE L1 -451 7193 6817 2 1284 1183 243 125 27 chr13 91630753 91631267 -28653045 + Lx9 LINE L1 5382 5971 -1673 2 1284 302 174 0 0 chr13 91631303 91631349 -28652963 - HAL1-3A_ME LINE L1 -838 2020 1975 2 1284 396 181 0 0 chr13 91631349 91631432 -28652880 + (TG)n Simple_repeat Simple_repeat 2 84 0 2 1284 372 94 0 0 chr13 91631608 91631661 -28652651 + (TCTA)n Simple_repeat Simple_repeat 1 53 0 2 1284 1089 302 48 8 chr13 91631677 91632077 -28652235 + Lx9 LINE L1 6361 6776 -868 2 1284 184 313 97 39 chr13 91632419 91632522 -28651790 - L2 LINE L2 -903 2516 2408 2 1284 721 229 118 0 chr13 91632546 91632720 -28651592 - B3 SINE B2 -7 209 14 2 1284 297 0 0 0 chr13 91632739 91632772 -28651540 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1284 268 380 48 55 chr13 91633126 91633418 -28650894 - L2 LINE L2 -449 2970 2681 2 1284 213 358 0 0 chr13 91633482 91633563 -28650749 + G-rich Low_complexity Low_complexity 1 81 0 2 1284 411 56 0 0 chr13 91633847 91633901 -28650411 + (TCCC)n Simple_repeat Simple_repeat 2 55 0 2 1284 225 243 57 0 chr13 91634394 91634464 -28649848 - HAL1 LINE L1 -332 2175 2102 2 1284 1274 221 159 0 chr13 91634600 91634953 -28649359 - Lx5 LINE L1 -5 7045 6637 2 1284 736 237 63 83 chr13 91635033 91635129 -28649183 - RLTR15 LTR ERVK -16 343 255 2 1284 3276 34 5 40 chr13 91635129 91635555 -28648757 - IAPLTR2a LTR ERVK 0 411 1 2 1284 736 237 63 83 chr13 91635555 91635808 -28648504 - RLTR15 LTR ERVK -105 254 1 2 1284 243 0 0 0 chr13 91635821 91635848 -28648464 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1284 294 328 22 66 chr13 91635990 91636173 -28648139 - HAL1 LINE L1 -2044 463 289 2 1284 28 0 0 0 chr13 91638572 91638600 -28645712 + AT_rich Low_complexity Low_complexity 1 28 0 2 1284 231 300 14 14 chr13 91639648 91639719 -28644593 - RMER17B LTR ERVK -790 168 98 2 1284 628 25 13 0 chr13 91639819 91639898 -28644414 - B1_Mm SINE Alu 0 147 68 2 1284 243 0 0 0 chr13 91639989 91640016 -28644296 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2 1284 693 273 53 5 chr13 91640054 91640260 -28644052 + B3 SINE B2 1 216 0 2 1284 440 175 0 48 chr13 91640277 91640361 -28643951 + B3 SINE B2 8 87 -129 2 1284 254 212 148 83 chr13 91640361 91640385 -28643927 + B4 SINE B4 8 122 -170 2 1284 259 257 122 0 chr13 91640553 91640627 -28643685 - MLT1C LTR MaLR 0 467 385 2 1284 1994 122 18 59 chr13 91640613 91641053 -28643259 - ORR1B1 LTR MaLR -14 380 1 2 1284 371 318 154 34 chr13 91641064 91641267 -28643045 - MLT1C LTR MaLR -66 401 146 2 1284 2471 140 34 12 chr13 91641267 91641679 -28642633 + MTC LTR MaLR 1 421 0 2 1284 371 318 154 34 chr13 91641679 91641833 -28642479 - MLT1C LTR MaLR -322 145 2 2 1284 787 131 14 7 chr13 91641970 91642116 -28642196 + CT-rich Low_complexity Low_complexity 3 149 0 2 1284 600 129 224 0 chr13 91642992 91643108 -28641204 + URR1A DNA MER1_type 3 144 -82 2 1284 3532 33 21 0 chr13 91643108 91643532 -28640780 + L1Md_T LINE L1 6150 6582 0 2 1284 469 184 11 0 chr13 91643674 91643761 -28640551 + URR1A DNA MER1_type 132 219 -7 2 1284 378 0 0 0 chr13 91644252 91644294 -28640018 + (CA)n Simple_repeat Simple_repeat 2 43 0 2 1284 234 0 0 0 chr13 91644560 91644586 -28639726 + (TC)n Simple_repeat Simple_repeat 2 27 0 2 1284 210 191 0 0 chr13 91644621 91644668 -28639644 + CT-rich Low_complexity Low_complexity 2 48 0 2 1284 270 0 0 0 chr13 91644668 91644698 -28639614 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1284 258 32 0 0 chr13 91644861 91644892 -28639420 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1284 249 33 0 0 chr13 91645910 91645940 -28638372 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 2 1284 246 32 0 0 chr13 91646560 91646591 -28637721 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1284 1076 87 0 0 chr13 91646591 91646729 -28637583 - B1_Mus1 SINE Alu -10 138 1 2 1284 325 261 182 16 chr13 91646839 91646960 -28637352 - HAL1-3A_ME LINE L1 -436 2422 2282 2 1284 246 152 43 0 chr13 91647327 91647373 -28636939 - B2_Mm2 SINE B2 -146 49 2 2 1284 589 162 13 19 chr13 91647396 91647553 -28636759 + (TCTA)n Simple_repeat Simple_repeat 3 158 0 2 1284 23 33 0 0 chr13 91647956 91647986 -28636326 + AT_rich Low_complexity Low_complexity 1 30 0 2 1284 1306 146 86 14 chr13 91648222 91648513 -28635799 - RLTR11B LTR ERVK 0 527 216 2 1284 1416 134 12 16 chr13 91648537 91648780 -28635532 - RLTR11B LTR ERVK -211 242 1 2 1284 923 239 155 0 chr13 91648998 91649282 -28635030 + MTD LTR MaLR 3 330 -89 2 1284 1253 92 40 0 chr13 91649839 91650012 -28634300 - B2_Mm2 SINE B2 -14 181 2 2 1284 4239 236 160 13 chr13 91650023 91650291 -28634021 - Lx7 LINE L1 -19 7677 7344 2 1284 231 36 0 0 chr13 91650291 91650319 -28633993 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 2 1284 4239 236 160 13 chr13 91650319 91651346 -28632966 - Lx7 LINE L1 -353 7343 6190 2 1284 360 0 0 0 chr13 91651346 91651386 -28632926 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1284 276 30 0 0 chr13 91651547 91651580 -28632732 + (TG)n Simple_repeat Simple_repeat 1 33 0 2 1284 243 0 0 0 chr13 91651580 91651606 -28632706 + (GA)n Simple_repeat Simple_repeat 1 27 0 2 1284 461 303 33 33 chr13 91651634 91651702 -28632610 - B4 SINE B4 0 292 225 2 1284 324 0 0 0 chr13 91651702 91651738 -28632574 + (TCCCC)n Simple_repeat Simple_repeat 4 39 0 2 1284 461 303 33 33 chr13 91651738 91651819 -28632493 - B4 SINE B4 -68 224 143 2 1284 274 258 50 8 chr13 91651846 91651967 -28632345 - L1MC LINE L1 -1168 4978 4853 2 1284 578 282 48 39 chr13 91652009 91652367 -28631945 - L1MC LINE L1 -1666 4480 4120 2 1284 1584 205 35 67 chr13 91652445 91652821 -28631491 - ORR1D1 LTR MaLR 0 374 11 2 1284 398 317 34 84 chr13 91652824 91653003 -28631309 + B4 SINE B4 51 220 -72 2 1284 234 300 0 191 chr13 91653566 91653702 -28630610 - B4 SINE B4 -168 124 15 2 1284 639 298 108 19 chr13 91653725 91654009 -28630303 - Lx8 LINE L1 -202 7271 6964 2 1284 198 0 0 0 chr13 91654009 91654031 -28630281 + (G)n Simple_repeat Simple_repeat 1 22 0 2 1284 639 304 101 21 chr13 91654031 91654223 -28630089 - Lx8 LINE L1 -510 6963 6748 2 1284 322 297 165 0 chr13 91654509 91654691 -28629621 - L1MC LINE L1 -532 5812 5601 2 1284 505 178 10 0 chr13 91654770 91654871 -28629441 - L1MC LINE L1 -2201 5584 5483 2 1284 21 57 0 0 chr13 91655056 91655091 -28629221 + AT_rich Low_complexity Low_complexity 1 35 0 2 1284 346 233 14 14 chr13 91655098 91655172 -28629140 - ID4_ SINE ID -9 74 1 2 1284 1126 82 0 0 chr13 91655626 91655772 -28628540 - B1_Mus2 SINE Alu -1 146 1 2 1284 1257 111 0 0 chr13 91656541 91656722 -28627590 - B2_Mm2 SINE B2 -14 181 1 2 1284 396 296 75 5 chr13 91656727 91656927 -28627385 - ORR1D2 LTR MaLR -8 362 149 2 1284 180 0 0 0 chr13 91656932 91656952 -28627360 + (GGGA)n Simple_repeat Simple_repeat 1 20 0 2 1284 397 236 26 35 chr13 91657027 91657141 -28627171 - ORR1D2 LTR MaLR -244 126 14 2 1284 993 180 70 19 chr13 91657159 91657374 -28626938 - URR1A DNA MER1_type 0 226 1 2 1284 369 0 0 0 chr13 91657557 91657598 -28626714 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1284 1219 178 118 15 chr13 91657610 91657872 -28626440 + ORR1C2 LTR MaLR 96 384 0 2 1284 226 218 126 24 chr13 91657872 91657999 -28626313 + Lx9 LINE L1 7504 7643 -1 2 1284 411 303 131 0 chr13 91658019 91658164 -28626148 + B4A SINE B4 129 292 0 2 1284 1916 261 78 18 chr13 91658228 91658833 -28625479 - RCHARR1 DNA MER1_type -177 797 157 2 1284 289 318 212 0 chr13 91659151 91659283 -28625029 - RSINE1 SINE B4 -2 163 4 2 1284 328 200 13 13 chr13 91660723 91660799 -28623513 - Lx8 LINE L1 -985 6488 6413 2 1284 234 0 0 0 chr13 91660947 91660973 -28623339 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 2 1284 2489 142 37 12 chr13 91661549 91661950 -28622362 + MTC LTR MaLR 3 413 -8 2 1284 190 270 62 16 chr13 91662165 91662229 -28622083 - MIRb SINE MIR -90 178 112 2 1284 22 35 0 0 chr13 91662229 91662258 -28622054 + AT_rich Low_complexity Low_complexity 1 29 0 2 1284 309 167 12 25 chr13 91662540 91662620 -28621692 + CT-rich Low_complexity Low_complexity 5 83 0 2 1284 387 0 0 0 chr13 91664014 91664057 -28620255 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1284 394 306 44 7 chr13 91664713 91664848 -28619464 + RSINE1 SINE B4 23 162 -3 2 1284 221 258 30 15 chr13 91665085 91665152 -28619160 - PB1D10 SINE Alu -36 81 14 2 1284 591 300 47 6 chr13 91665362 91665654 -28618658 + L1MA4 LINE L1 5635 5902 -1571 2 1284 228 35 0 0 chr13 91665679 91665708 -28618604 + (CGTG)n Simple_repeat Simple_repeat 3 31 0 2 1284 405 39 0 0 chr13 91665746 91665797 -28618515 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1284 520 91 0 22 chr13 91666490 91666580 -28617732 + (TAGA)n Simple_repeat Simple_repeat 4 91 0 2 1284 188 135 27 0 chr13 91666587 91666624 -28617688 + GA-rich Low_complexity Low_complexity 2 39 0 2 1284 360 0 0 0 chr13 91666694 91666734 -28617578 + (TC)n Simple_repeat Simple_repeat 1 40 0 2 1284 378 0 0 0 chr13 91666734 91666775 -28617537 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1284 495 168 14 14 chr13 91667150 91667296 -28617016 + B1_Mur4 SINE Alu 3 150 0 2 1284 242 182 0 143 chr13 91667227 91667304 -28617008 + ID_B1 SINE B4 159 224 0 2 1284 250 216 86 43 chr13 91667399 91667515 -28616797 - Lx7 LINE L1 -163 7533 7413 3 1284 668 233 0 8 chr13 91667927 91668061 -28616251 + B1_Mus2 SINE Alu 1 133 -14 3 1284 231 36 0 0 chr13 91668064 91668092 -28616220 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3 1284 268 305 31 21 chr13 91668991 91669088 -28615224 + MER3 DNA MER1_type 53 150 -59 3 1284 306 353 44 38 chr13 91669887 91670046 -28614266 - LTR33 LTR ERVL -339 176 17 3 1284 279 79 0 0 chr13 91670057 91670095 -28614217 + (CCCA)n Simple_repeat Simple_repeat 3 40 0 3 1284 1158 122 0 0 chr13 91670095 91670275 -28614037 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 3 1284 375 289 36 29 chr13 91670301 91670440 -28613872 - B1F2 SINE Alu -7 142 3 3 1284 606 14 0 0 chr13 91672479 91672550 -28611762 + (TTTC)n Simple_repeat Simple_repeat 3 73 0 3 1284 1202 41 7 0 chr13 91672551 91672696 -28611616 - B1_Mus2 SINE Alu 0 147 2 3 1284 3782 188 120 13 chr13 91672707 91673535 -28610777 - RMER19B LTR ERVK -12 890 40 3 1284 189 0 0 0 chr13 91673539 91673560 -28610752 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1284 931 88 14 14 chr13 91673560 91673698 -28610614 - B1_Mus1 SINE Alu 0 148 11 3 1284 250 105 0 0 chr13 91673696 91673734 -28610578 - RMER19B LTR ERVK -864 38 1 3 1284 1113 59 0 0 chr13 91674175 91674311 -28610001 - B1_Mus1 SINE Alu -11 137 2 3 1284 372 119 0 33 chr13 91674524 91674585 -28609727 + B1_Mus1 SINE Alu 2 60 -88 3 1284 754 76 19 0 chr13 91674636 91674741 -28609571 + B1_Mus2 SINE Alu 41 147 0 3 1284 242 302 31 8 chr13 91675091 91675218 -28609094 - Lx9 LINE L1 -1754 5890 5761 3 1284 1068 305 47 19 chr13 91675368 91676075 -28608237 - L1_Mur3 LINE L1 -523 5777 5005 3 1284 214 306 88 18 chr13 91677554 91677667 -28606645 - MIR SINE MIR -79 183 63 3 1284 227 388 64 43 chr13 91677749 91678007 -28606305 - LTR33A LTR ERVL -1 519 256 3 1284 723 104 0 0 chr13 91678007 91678113 -28606199 + (GA)n Simple_repeat Simple_repeat 1 106 0 3 1284 227 358 159 44 chr13 91678113 91678219 -28606093 - LTR33A LTR ERVL -265 255 235 3 1284 288 130 0 0 chr13 91678427 91678473 -28605839 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1284 393 335 30 61 chr13 91678486 91678651 -28605661 - RSINE1 SINE B4 -4 161 2 3 1284 972 330 49 23 chr13 91679239 91679589 -28604723 - MLT1A LTR MaLR -15 359 1 3 1284 237 33 0 0 chr13 91680346 91680376 -28603936 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1284 254 215 0 30 chr13 91680548 91680615 -28603697 + (TCTCTG)n Simple_repeat Simple_repeat 5 69 0 3 1284 32 26 0 0 chr13 91682109 91682148 -28602164 + AT_rich Low_complexity Low_complexity 1 39 0 3 1284 378 42 0 0 chr13 91682581 91682629 -28601683 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1284 773 151 5 30 chr13 91683132 91683292 -28601020 - B2_Mm1t SINE B2 -3 192 33 3 1284 980 94 0 92 chr13 91683681 91683833 -28600479 - B1_Mus1 SINE Alu -10 138 1 3 1284 519 295 39 64 chr13 91683998 91684201 -28600111 - B3A SINE B2 0 198 1 3 1284 1536 210 78 22 chr13 91684243 91684656 -28599656 - RMER1B Other Other 0 1066 631 3 1284 676 250 136 7 chr13 91684652 91684938 -28599374 - L1_Mur3 LINE L1 -6550 1162 840 3 1284 980 61 106 0 chr13 91685868 91686000 -28598312 + B1_Mm SINE Alu 2 147 0 3 1284 457 234 166 46 chr13 91688123 91688298 -28596014 - MTD LTR MaLR -39 380 185 3 1284 27438 98 16 9 chr13 91688570 91693357 -28590955 + L1Md_F2 LINE L1 767 5586 -297 3 1284 8115 45 2 1 chr13 91693357 91694340 -28589972 + L1Md_F2 LINE L1 5587 6570 -12 3 1284 11314 155 50 8 chr13 91694365 91697621 -28586691 + Lx2 LINE L1 3639 6996 -1 3 1284 371 229 25 84 chr13 91697746 91697865 -28586447 + PB1D10 SINE Alu 6 117 0 3 1284 6437 90 22 1 chr13 91698352 91699312 -28585000 - L1_Mus3 LINE L1 0 6638 5659 3 1284 17378 122 25 18 chr13 91699308 91703220 -28581092 - L1VL1 LINE L1 -1707 4176 236 3 1284 272 365 0 0 chr13 91704641 91704715 -28579597 - tRNA-Ala-GCA tRNA tRNA -1 74 1 3 1284 229 321 22 176 chr13 91705792 91706019 -28578293 + B2_Mm2 SINE B2 1 192 -3 3 1284 25 31 0 0 chr13 91706583 91706615 -28577697 + AT_rich Low_complexity Low_complexity 1 32 0 3 1284 3128 168 80 45 chr13 91706850 91707344 -28576968 - Lx5 LINE L1 -818 6232 5694 3 1284 1174 61 0 13 chr13 91707344 91707493 -28576819 - B1_Mus2 SINE Alu 0 147 1 3 1284 3128 178 35 169 chr13 91707493 91708627 -28575685 - Lx5 LINE L1 -184 5702 4873 3 1284 226 333 14 0 chr13 91708920 91708989 -28575323 + ID4 SINE ID 3 72 -11 3 1284 403 183 70 0 chr13 91709000 91709071 -28575241 - B1_Mur2 SINE Alu -51 98 23 3 1284 1990 102 45 57 chr13 91709350 91709704 -28574608 - Lx3A LINE L1 -3 6978 6629 3 1284 5360 72 20 1 chr13 91709704 91710681 -28573631 - Lx3_Mus LINE L1 -619 6390 5396 3 1284 3714 78 0 6 chr13 91710679 91711207 -28573105 + Lx3_Mus LINE L1 4892 5416 -470 3 1284 271 306 91 16 chr13 91711280 91711466 -28572846 - L1MD2 LINE L1 -93 6266 6067 3 1284 195 284 202 0 chr13 91712351 91712460 -28571852 - L2a LINE L2 -1 3425 3295 3 1284 1024 306 60 27 chr13 91712797 91713278 -28571034 - Lx6 LINE L1 -74 6976 6480 3 1284 2880 198 51 16 chr13 91713350 91714260 -28570052 - Lx6 LINE L1 -1203 6257 5279 3 1284 6988 181 99 195 chr13 91714257 91715463 -28568849 - Lx6 LINE L1 -1511 4366 3042 3 1284 1952 201 81 53 chr13 91715463 91716115 -28568197 - RLTR31_Mm LTR ERVK -3 581 1 3 1284 6988 181 99 195 chr13 91716115 91717815 -28566497 - Lx6 LINE L1 -1511 3041 1171 3 1284 1257 14 7 0 chr13 91717815 91717961 -28566351 - B1_Mus2 SINE Alu 0 147 1 3 1284 761 251 25 20 chr13 91717961 91718255 -28566057 - Lx6 LINE L1 -6533 1195 917 3 1284 683 331 63 30 chr13 91718875 91719146 -28565166 - B4A SINE B4 -10 282 3 3 1284 367 242 47 70 chr13 91720044 91720173 -28564139 - L1MCc LINE L1 -5466 957 832 3 1284 482 338 81 42 chr13 91720355 91720639 -28563673 - L1MCc LINE L1 -5945 478 184 3 1284 238 265 61 0 chr13 91720962 91721011 -28563301 - ID SINE ID -136 88 37 3 1284 290 259 35 0 chr13 91720974 91721032 -28563280 - tRNA-Ala-GCY_ tRNA tRNA -9 66 7 3 1284 213 132 0 0 chr13 91721307 91721345 -28562967 + (CTA)n Simple_repeat Simple_repeat 2 39 0 3 1284 204 40 0 0 chr13 91721407 91721432 -28562880 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1284 10333 93 16 7 chr13 91722041 91724447 -28559865 - L1VL2 LINE L1 -1101 2597 179 3 1284 24 0 0 0 chr13 91724896 91724920 -28559392 + AT_rich Low_complexity Low_complexity 1 24 0 3 1284 513 283 112 21 chr13 91725591 91725779 -28558533 - ID_B1 SINE B4 0 224 20 3 1284 1361 81 27 0 chr13 91726113 91726299 -28558013 - B2_Mm2 SINE B2 -4 191 1 3 1284 28 29 0 0 chr13 91726424 91726459 -28557853 + AT_rich Low_complexity Low_complexity 1 35 0 3 1284 257 292 28 0 chr13 91727088 91727160 -28557152 + (TG)n Simple_repeat Simple_repeat 1 74 0 3 1284 594 68 0 0 chr13 91727230 91727318 -28556994 + (TC)n Simple_repeat Simple_repeat 2 89 0 3 1284 306 0 0 0 chr13 91727318 91727351 -28556961 + (TG)n Simple_repeat Simple_repeat 1 34 0 3 1284 199 310 76 42 chr13 91727636 91727754 -28556558 - MIRb SINE MIR -18 250 129 3 1284 203 200 65 91 chr13 91727982 91728059 -28556253 + L2 LINE L2 2179 2253 -1166 3 1284 375 238 8 139 chr13 91728735 91728857 -28555455 + PB1D7 SINE Alu 12 117 -3 3 1284 263 258 15 0 chr13 91729517 91729583 -28554729 + MTE2a LTR MaLR 289 355 -24 3 1284 282 329 13 0 chr13 91729712 91729791 -28554521 + ID4_ SINE ID 2 81 -2 3 1284 21 0 0 0 chr13 91730532 91730553 -28553759 + AT_rich Low_complexity Low_complexity 1 21 0 3 1284 2334 170 24 21 chr13 91730990 91731410 -28552902 - MTC LTR MaLR 0 421 1 3 1284 1855 211 76 63 chr13 91731959 91732514 -28551798 - RMER15 LTR ERVL 0 575 14 3 1284 216 0 0 0 chr13 91732664 91732688 -28551624 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1284 519 142 195 7 chr13 91733451 91733600 -28550712 - Lx7 LINE L1 -1 7695 7519 3 1284 997 303 88 25 chr13 91734959 91735473 -28548839 - Lx7 LINE L1 -989 6707 6162 3 1284 349 259 12 0 chr13 91735737 91735818 -28548494 - B3A SINE B2 -116 82 1 3 1284 5877 65 8 0 chr13 91736310 91737069 -28547243 + L1_Mus3 LINE L1 5873 6637 -1 3 1284 252 73 73 0 chr13 91737738 91737793 -28546519 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 3 1284 202 132 26 0 chr13 91737995 91738033 -28546279 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1284 4338 225 81 21 chr13 91738062 91739293 -28545019 - Lx9 LINE L1 -1 7643 6339 3 1284 1478 146 52 11 chr13 91739296 91739566 -28544746 - MTC LTR MaLR -6 415 135 3 1284 249 122 0 0 chr13 91739579 91739611 -28544701 + (TCCC)n Simple_repeat Simple_repeat 1 32 0 3 1284 6349 32 1 4 chr13 91739611 91740372 -28543940 - L1Md_F3 LINE L1 0 6584 5826 3 1284 249 122 0 0 chr13 91740372 91740388 -28543924 + (TCCC)n Simple_repeat Simple_repeat 1 16 0 3 1284 1692 216 39 30 chr13 91740408 91740842 -28543470 - RMER1B Other Other -578 488 51 3 1284 733 218 6 6 chr13 91741334 91741514 -28542798 - L1M3 LINE L1 -2281 3859 3680 3 1284 307 359 86 67 chr13 91742463 91742732 -28541580 + B4A SINE B4 7 280 -12 3 1284 24 0 0 0 chr13 91743056 91743080 -28541232 + AT_rich Low_complexity Low_complexity 1 24 0 3 1284 184 257 176 10 chr13 91743862 91743964 -28540348 - L4 LINE RTE -1672 357 239 3 1284 376 296 23 0 chr13 91744192 91744280 -28540032 - PB1D10 SINE Alu -5 112 23 3 1284 594 255 115 40 chr13 91744717 91744917 -28539395 - B3 SINE B2 0 216 2 3 1284 22 0 0 0 chr13 91744925 91744947 -28539365 + AT_rich Low_complexity Low_complexity 1 22 0 3 1284 189 0 0 0 chr13 91745398 91745419 -28538893 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1284 288 0 0 0 chr13 91745485 91745517 -28538795 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 1284 22 0 0 0 chr13 91745655 91745677 -28538635 + AT_rich Low_complexity Low_complexity 1 22 0 3 1284 248 273 30 0 chr13 91746364 91746430 -28537882 - ID_B1 SINE B4 -9 215 148 3 1284 22 35 0 0 chr13 91746444 91746473 -28537839 + AT_rich Low_complexity Low_complexity 1 29 0 4 1284 1942 273 93 50 chr13 91746916 91747729 -28536583 - RMER13A LTR ERVK -12 848 1 4 1284 499 334 68 79 chr13 91748016 91748383 -28535929 - MLT1A0 LTR MaLR 0 365 3 4 1284 564 89 0 0 chr13 91748415 91748494 -28535818 + (TCCC)n Simple_repeat Simple_repeat 4 82 0 4 1284 727 204 221 0 chr13 91748501 91748673 -28535639 - B3 SINE B2 -6 210 1 4 1284 518 282 105 14 chr13 91748804 91749099 -28535213 - L1M3 LINE L1 -760 5380 5059 4 1284 383 0 0 21 chr13 91749157 91749205 -28535107 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1284 482 268 18 97 chr13 91749222 91749387 -28534925 - RSINE1 SINE B4 -12 153 2 4 1284 406 254 119 5 chr13 91749389 91749585 -28534727 - L1M3 LINE L1 -1189 4951 4737 4 1285 31 0 0 0 chr13 91750642 91750673 -28533639 + AT_rich Low_complexity Low_complexity 1 31 0 4 1285 676 315 105 20 chr13 91751558 91751901 -28532411 + MLT1A LTR MaLR 2 373 -1 4 1285 21 57 0 0 chr13 91752164 91752199 -28532113 + AT_rich Low_complexity Low_complexity 1 35 0 4 1285 24 85 0 0 chr13 91752985 91753044 -28531268 + AT_rich Low_complexity Low_complexity 1 59 0 4 1285 24 0 0 0 chr13 91753326 91753350 -28530962 + AT_rich Low_complexity Low_complexity 1 24 0 4 1285 261 0 0 0 chr13 91753401 91753430 -28530882 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1285 261 263 0 0 chr13 91754735 91754792 -28529520 - Lx8 LINE L1 -590 6883 6827 4 1285 575 228 15 80 chr13 91754833 91755033 -28529279 - Lx8 LINE L1 -1562 5911 5725 4 1285 313 304 13 0 chr13 91755098 91755177 -28529135 - PB1D10 SINE Alu -16 101 22 4 1285 2140 298 83 25 chr13 91757305 91758377 -28525935 - Lx8 LINE L1 -146 7327 6194 4 1285 1404 66 22 0 chr13 91758669 91758851 -28525461 + B2_Mm1a SINE B2 2 187 -6 4 1285 15225 191 79 88 chr13 91759520 91763077 -28521235 - Lx6 LINE L1 -14 7446 3652 4 1285 1192 48 14 0 chr13 91763077 91763222 -28521090 - B1_Mm SINE Alu 0 147 1 4 1285 15225 178 77 106 chr13 91763222 91763411 -28520901 - Lx6 LINE L1 -2229 3651 3476 4 1285 264 59 0 0 chr13 91763411 91763445 -28520867 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 4 1285 1122 58 0 0 chr13 91763447 91763586 -28520726 - B1_Mus2 SINE Alu -6 141 3 4 1285 15225 178 77 106 chr13 91763586 91764396 -28519916 - Lx6 LINE L1 -2405 3475 2743 4 1285 413 162 148 20 chr13 91764396 91764497 -28519815 - ORR1B2 LTR MaLR -253 114 1 4 1285 15225 178 77 106 chr13 91764497 91766195 -28518117 - Lx6 LINE L1 -2405 2742 1203 4 1285 306 0 0 0 chr13 91766195 91766229 -28518083 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1285 1668 195 17 90 chr13 91766229 91766606 -28517706 - Lx6 LINE L1 -6507 1221 859 4 1285 891 156 45 57 chr13 91766956 91767133 -28517179 + ORR1A4 LTR MaLR 1 175 -154 4 1285 1380 151 363 3 chr13 91767123 91767456 -28516856 - ORR1A3-int LTR MaLR -481 1482 859 4 1285 355 293 81 52 chr13 91767555 91767728 -28516584 - L1MCa LINE L1 -5272 1236 1059 4 1285 236 321 0 0 chr13 91768100 91768181 -28516131 - MIR SINE MIR 0 262 182 4 1285 767 266 214 38 chr13 91768377 91768844 -28515468 - ORR1A3-int LTR MaLR -84 1174 625 4 1285 270 0 0 0 chr13 91769810 91769840 -28514472 + (TTA)n Simple_repeat Simple_repeat 2 31 0 4 1285 1188 61 0 0 chr13 91769850 91769997 -28514315 - B1_Mm SINE Alu 0 147 1 4 1285 463 291 71 0 chr13 91771569 91771585 -28512727 - B4 SINE B4 -74 218 86 4 1285 487 259 37 0 chr13 91771585 91771693 -28512619 - B1F2 SINE Alu -37 112 1 4 1285 308 231 64 32 chr13 91773108 91773202 -28511110 - PB1D10 SINE Alu -19 98 2 4 1285 204 158 20 40 chr13 91775767 91775866 -28508446 + T-rich Low_complexity Low_complexity 1 97 0 4 1285 867 182 14 0 chr13 91775867 91776010 -28508302 - B1_Mur1 SINE Alu -1 148 4 4 1285 262 271 59 0 chr13 91776528 91776613 -28507699 - MLT1A1 LTR MaLR -13 395 306 4 1285 465 279 179 0 chr13 91776647 91776826 -28507486 - MLT1A1 LTR MaLR -195 213 3 4 1285 401 239 100 9 chr13 91778701 91778811 -28505501 + B1F1 SINE Alu 3 122 -27 4 1285 374 218 9 0 chr13 91778839 91778949 -28505363 + GA-rich Low_complexity Low_complexity 2 112 0 4 1285 232 301 31 31 chr13 91779081 91779208 -28505104 + L2a LINE L2 3228 3354 -72 4 1285 470 247 244 12 chr13 91779421 91779441 -28504871 - B3A SINE B2 0 198 179 4 1285 423 0 0 0 chr13 91779441 91779488 -28504824 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 4 1285 1029 29 144 0 chr13 91779488 91779627 -28504685 - B2_Mm1t SINE B2 -33 160 2 4 1285 1131 245 110 55 chr13 91780493 91781077 -28503235 - L1MA6 LINE L1 -133 6167 5552 4 1285 30 0 0 0 chr13 91782456 91782486 -28501826 + AT_rich Low_complexity Low_complexity 1 30 0 4 1285 202 351 153 55 chr13 91783089 91783291 -28501021 - MIR SINE MIR 0 262 41 4 1285 312 256 23 23 chr13 91785764 91785852 -28498460 + CT-rich Low_complexity Low_complexity 3 90 0 4 1285 420 284 74 96 chr13 91786037 91786371 -28497941 - ORR1E LTR MaLR -37 342 3 4 1285 243 347 25 30 chr13 91786590 91786619 -28497693 - Lx4A LINE L1 -415 6643 6616 4 1285 697 71 0 118 chr13 91786619 91786763 -28497549 - L1_Mus2 LINE L1 0 6566 6440 4 1285 1317 35 6 0 chr13 91786763 91786932 -28497380 - L1_Mus2 LINE L1 -299 6267 6098 4 1285 916 60 111 7 chr13 91787561 91787696 -28496616 + B1_Mur4 SINE Alu 2 150 0 4 1285 3229 208 26 9 chr13 91788468 91789123 -28495189 - Lx5 LINE L1 -11 7039 6374 4 1285 1094 200 19 10 chr13 91789123 91789362 -28494950 + Lx5 LINE L1 6159 6420 -553 4 1285 23 0 0 0 chr13 91789414 91789437 -28494875 + AT_rich Low_complexity Low_complexity 1 23 0 4 1285 689 202 226 0 chr13 91789450 91789618 -28494694 - B3 SINE B2 -10 206 1 4 1285 23 0 0 0 chr13 91790077 91790100 -28494212 + AT_rich Low_complexity Low_complexity 1 23 0 4 1285 31 58 0 0 chr13 91791058 91791110 -28493202 + AT_rich Low_complexity Low_complexity 1 52 0 4 1285 266 217 16 48 chr13 91791115 91791178 -28493134 - ID SINE ID -140 84 24 4 1285 273 284 0 0 chr13 91791124 91791191 -28493121 - ID4 SINE ID -7 76 10 4 1285 22 0 0 0 chr13 91791496 91791518 -28492794 + AT_rich Low_complexity Low_complexity 1 22 0 4 1285 5847 152 70 11 chr13 91791518 91793426 -28490886 - Lx3C LINE L1 -4 6972 4929 4 1285 2190 284 55 45 chr13 91793424 91793617 -28490695 - Lx7 LINE L1 -953 6743 6541 4 1285 2312 111 3 0 chr13 91793617 91793941 -28490371 - ORR1A2 LTR MaLR -1 326 2 4 1285 2190 284 55 45 chr13 91793941 91794601 -28489711 - Lx7 LINE L1 -1156 6540 5881 4 1285 230 200 36 18 chr13 91794680 91794736 -28489576 + RMER12B LTR ERVK 1168 1224 -180 4 1285 24 67 0 0 chr13 91795485 91795530 -28488782 + AT_rich Low_complexity Low_complexity 1 45 0 4 1285 424 77 0 0 chr13 91796750 91796815 -28487497 + L1_Mus2 LINE L1 6502 6566 0 4 1285 195 129 0 0 chr13 91796818 91796849 -28487463 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1285 7428 65 1 0 chr13 91796953 91797950 -28486362 + L1Md_F2 LINE L1 4587 5584 -299 4 1285 8034 44 9 2 chr13 91797953 91798937 -28485375 + L1Md_F2 LINE L1 5588 6578 -4 4 1285 457 330 108 59 chr13 91799284 91799388 -28484924 - MLT1A0 LTR MaLR -4 361 253 4 1285 480 305 59 5 chr13 91799388 91799592 -28484720 + ID_B1 SINE B4 2 216 -8 4 1285 457 330 108 59 chr13 91799592 91799828 -28484484 - MLT1A0 LTR MaLR -113 252 4 4 1285 1112 56 28 0 chr13 91800238 91800381 -28483931 - B1_Mus1 SINE Alu 0 148 2 4 1285 214 289 94 24 chr13 91800387 91800472 -28483840 + L2a LINE L2 3330 3420 -6 4 1285 307 375 50 6 chr13 91800714 91800875 -28483437 - MIR3 SINE MIR -7 201 34 4 1285 273 29 0 0 chr13 91801290 91801324 -28482988 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1285 1242 28 7 0 chr13 91801328 91801473 -28482839 - B1_Mus2 SINE Alu 0 147 2 4 1285 765 31 0 0 chr13 91801623 91801719 -28482593 + (TCCC)n Simple_repeat Simple_repeat 4 99 0 4 1285 23 54 0 0 chr13 91802144 91802181 -28482131 + AT_rich Low_complexity Low_complexity 1 37 0 4 1285 25 31 0 0 chr13 91802946 91802978 -28481334 + AT_rich Low_complexity Low_complexity 1 32 0 4 1285 231 342 112 20 chr13 91803925 91804077 -28480235 + MER58A DNA MER1_type 27 192 -32 4 1285 624 189 6 139 chr13 91804645 91804817 -28479495 + B1_Mur3 SINE Alu 1 149 0 4 1285 354 23 0 0 chr13 91805538 91805581 -28478731 + (CA)n Simple_repeat Simple_repeat 1 43 0 4 1285 1233 274 56 65 chr13 91805637 91806316 -28477996 - L1_Rod LINE L1 0 5847 5175 4 1285 697 203 21 7 chr13 91806470 91806614 -28477698 - MTD LTR MaLR -4 415 270 4 1285 209 238 12 0 chr13 91806635 91806715 -28477597 + (CA)n Simple_repeat Simple_repeat 1 81 0 4 1285 485 340 146 26 chr13 91806723 91807331 -28476981 + L1MC4 LINE L1 6998 7678 -364 4 1285 923 169 45 89 chr13 91807755 91808002 -28476310 + Lx9 LINE L1 7248 7483 -161 4 1285 198 0 0 0 chr13 91808029 91808051 -28476261 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 1285 464 167 0 32 chr13 91808052 91808176 -28476136 + (TA)n Simple_repeat Simple_repeat 2 121 0 4 1285 501 124 60 34 chr13 91808203 91808223 -28476089 + Lx9 LINE L1 7500 7516 -128 4 1285 222 118 0 0 chr13 91808223 91808257 -28476055 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1285 501 124 60 34 chr13 91808257 91808353 -28475959 + Lx9 LINE L1 7517 7619 -25 4 1285 22 0 0 0 chr13 91808629 91808651 -28475661 + AT_rich Low_complexity Low_complexity 1 22 0 4 1285 414 0 0 0 chr13 91808758 91808804 -28475508 + (TC)n Simple_repeat Simple_repeat 1 46 0 4 1285 426 194 86 0 chr13 91808805 91808898 -28475414 - B1_Mus1 SINE Alu -8 140 40 4 1285 239 239 102 51 chr13 91808865 91808911 -28475401 - RLTR25B LTR ERVK -431 597 552 4 1285 420 20 0 0 chr13 91808911 91808960 -28475352 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 4 1285 468 162 112 0 chr13 91808970 91809050 -28475262 - B1_Mur3 SINE Alu -9 140 52 4 1285 513 142 202 9 chr13 91810673 91810787 -28473525 - B1_Mur2 SINE Alu -1 148 13 4 1285 189 231 0 25 chr13 91811726 91811766 -28472546 - MIRb SINE MIR -8 260 222 4 1285 221 346 67 113 chr13 91811733 91811883 -28472429 - L2c LINE L2 -18 3369 3227 4 1285 210 260 78 0 chr13 91812089 91812166 -28472146 - MIRb SINE MIR -69 199 117 4 1285 287 311 14 2 chr13 91812195 91812300 -28472012 + PB1D10 SINE Alu 13 119 -1 4 1285 3587 13 0 0 chr13 91812417 91812813 -28471499 - MTA_Mm LTR MaLR 0 396 1 4 1285 23 33 0 0 chr13 91814292 91814322 -28469990 + AT_rich Low_complexity Low_complexity 1 30 0 4 1285 22 35 0 0 chr13 91815923 91815952 -28468360 + AT_rich Low_complexity Low_complexity 1 29 0 4 1285 195 114 0 0 chr13 91816361 91816396 -28467916 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1285 850 163 7 26 chr13 91817292 91817443 -28466869 - B1_Mur3 SINE Alu 0 149 2 5 1285 26 64 0 0 chr13 91817450 91817497 -28466815 + AT_rich Low_complexity Low_complexity 1 47 0 5 1285 1209 88 64 0 chr13 91817502 91817673 -28466639 - B2_Mm2 SINE B2 -12 183 2 5 1285 27 0 0 0 chr13 91817681 91817708 -28466604 + AT_rich Low_complexity Low_complexity 1 27 0 5 1285 224 250 0 106 chr13 91817760 91817845 -28466467 - RSINE1 SINE B4 -86 79 4 5 1285 1535 75 0 0 chr13 91818397 91818598 -28465714 - L1_Mus2 LINE L1 0 6566 6366 5 1285 2584 137 32 7 chr13 91818601 91819043 -28465269 - Lx2B LINE L1 -25 6975 6523 5 1285 23 33 0 0 chr13 91819427 91819457 -28464855 + AT_rich Low_complexity Low_complexity 1 30 0 5 1285 23 0 0 0 chr13 91820729 91820752 -28463560 + AT_rich Low_complexity Low_complexity 1 23 0 5 1285 46 33 0 0 chr13 91821064 91821124 -28463188 + AT_rich Low_complexity Low_complexity 1 60 0 5 1285 327 299 11 0 chr13 91821153 91821240 -28463072 - B3 SINE B2 -29 187 100 5 1285 23 0 0 0 chr13 91821507 91821530 -28462782 + AT_rich Low_complexity Low_complexity 1 23 0 5 1285 180 0 0 0 chr13 91823798 91823818 -28460494 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 1285 641 81 55 24 chr13 91825032 91825159 -28459153 - Lx2A LINE L1 -5 7003 6873 5 1285 21 0 0 0 chr13 91826003 91826024 -28458288 + AT_rich Low_complexity Low_complexity 1 21 0 5 1285 907 158 56 61 chr13 91826856 91827052 -28457260 + B2_Mm2 SINE B2 1 195 0 5 1285 857 184 0 0 chr13 91827275 91827416 -28456896 + B1_Mur2 SINE Alu 1 141 -8 5 1285 515 266 86 0 chr13 91827772 91827900 -28456412 + B1F SINE Alu 4 142 -7 5 1285 3152 46 8 10 chr13 91828607 91829004 -28455308 - MTA_Mm LTR MaLR 0 396 1 5 1285 593 38 12 0 chr13 91829191 91829271 -28455041 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1285 413 333 14 21 chr13 91829283 91829427 -28454885 - RSINE1 SINE B4 -19 146 4 5 1285 242 269 0 29 chr13 91829588 91829657 -28454655 + CT-rich Low_complexity Low_complexity 4 70 0 5 1285 22 35 0 0 chr13 91830574 91830603 -28453709 + AT_rich Low_complexity Low_complexity 1 29 0 5 1285 385 270 101 16 chr13 91831540 91831728 -28452584 - MER3 DNA MER1_type -4 205 2 5 1285 210 143 0 0 chr13 91833505 91833540 -28450772 + (CTG)n Simple_repeat Simple_repeat 1 35 0 5 1285 427 278 38 0 chr13 91835339 91835472 -28448840 - RCHARR1 DNA MER1_type -54 920 783 5 1285 414 0 0 0 chr13 91835506 91835552 -28448760 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 1285 538 161 32 21 chr13 91835563 91835658 -28448654 - B1_Mur4 SINE Alu -22 128 33 5 1285 615 260 80 0 chr13 91835659 91835859 -28448453 - RCHARR1 DNA MER1_type -216 758 543 5 1285 281 223 94 21 chr13 91838456 91838552 -28445760 - MER3 DNA MER1_type -99 110 8 5 1285 186 222 0 0 chr13 91838700 91838754 -28445558 + (TA)n Simple_repeat Simple_repeat 1 54 0 5 1285 314 130 0 0 chr13 91838939 91838993 -28445319 - Lx9 LINE L1 0 7644 7591 5 1285 347 94 19 0 chr13 91839537 91839590 -28444722 - HAL1-3A_ME LINE L1 -829 2029 1976 5 1285 339 226 0 0 chr13 91839601 91839703 -28444609 + (TG)n Simple_repeat Simple_repeat 1 102 0 5 1285 216 97 0 0 chr13 91847256 91847287 -28437025 + (CATG)n Simple_repeat Simple_repeat 1 31 0 5 1285 769 93 16 0 chr13 91849717 91849846 -28434466 + (TC)n Simple_repeat Simple_repeat 2 132 0 5 1285 7121 156 53 31 chr13 91849932 91851624 -28432688 - Lx5 LINE L1 -1 7049 5302 5 1285 11169 138 56 30 chr13 91851615 91853920 -28430392 - Lx5 LINE L1 -2619 3258 894 5 1285 440 333 78 23 chr13 91854159 91854377 -28429935 + B4A SINE B4 49 278 -14 5 1285 196 400 0 12 chr13 91854540 91854626 -28429686 + MIR3 SINE MIR 87 171 -37 5 1285 26 30 0 0 chr13 91855796 91855829 -28428483 + AT_rich Low_complexity Low_complexity 1 33 0 5 1285 613 111 32 25 chr13 91855924 91856081 -28428231 + (TAGA)n Simple_repeat Simple_repeat 4 161 0 5 1285 495 0 0 0 chr13 91856084 91856139 -28428173 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1285 926 97 22 17 chr13 91856139 91856318 -28427994 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1285 473 71 14 0 chr13 91856348 91856418 -28427894 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 5 1285 25 31 0 0 chr13 91856492 91856524 -28427788 + AT_rich Low_complexity Low_complexity 1 32 0 5 1285 21 0 0 0 chr13 91856897 91856918 -28427394 + AT_rich Low_complexity Low_complexity 1 21 0 5 1285 24 0 0 0 chr13 91857289 91857313 -28426999 + AT_rich Low_complexity Low_complexity 1 24 0 5 1285 1687 239 156 38 chr13 91857373 91857977 -28426335 - Lx9 LINE L1 -43 7601 6927 5 1285 253 207 52 0 chr13 91857979 91858037 -28426275 - Lx9 LINE L1 -682 6962 6902 5 1285 29 0 0 0 chr13 91858333 91858362 -28425950 + AT_rich Low_complexity Low_complexity 1 29 0 5 1285 202 293 17 0 chr13 91858935 91858993 -28425319 + CT-rich Low_complexity Low_complexity 2 60 0 5 1285 219 150 0 70 chr13 91858936 91858979 -28425333 + C-rich Low_complexity Low_complexity 1 40 0 5 1285 502 252 18 0 chr13 91859174 91859285 -28425027 + MER115 DNA Tip100 558 670 -23 5 1285 229 51 0 49 chr13 91859402 91859443 -28424869 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 5 1285 1239 293 70 33 chr13 91860068 91860729 -28423583 - L1MA5A LINE L1 -359 5938 5254 5 1285 2248 268 156 25 chr13 91860739 91861982 -28422330 - L1MA5A LINE L1 -1812 4334 2870 5 1285 6578 52 16 2 chr13 91862010 91862799 -28421513 + L1_Mus3 LINE L1 5838 6637 -1 5 1285 1341 249 80 89 chr13 91863065 91863564 -28420748 + RMER1A Other Other 1 536 -530 5 1285 3767 168 55 17 chr13 91863531 91864226 -28420086 + RMER1B Other Other 346 1066 0 5 1285 569 341 124 19 chr13 91864241 91864815 -28419497 - L1MA5A LINE L1 -3264 2879 2246 5 1285 268 274 87 27 chr13 91865153 91865303 -28419009 - L1M4c LINE L1 -4686 1947 1789 5 1285 346 348 40 50 chr13 91865378 91865774 -28418538 - L1M4c LINE L1 -4995 1544 1153 5 1285 415 158 95 69 chr13 91865791 91865907 -28418405 + MTD LTR MaLR 293 411 -8 5 1285 3601 231 144 51 chr13 91865911 91867062 -28417250 + MTD-int LTR MaLR 1 1258 0 5 1285 1812 147 175 9 chr13 91867062 91867411 -28416901 + MTD LTR MaLR 1 407 -12 5 1285 388 319 152 61 chr13 91867418 91867825 -28416487 + L1MC4 LINE L1 7459 7902 -140 5 1285 387 83 0 0 chr13 91867869 91867929 -28416383 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1285 39382 8 0 1 chr13 91867984 91873986 -28410326 + L1Md_A LINE L1 1 5586 -297 5 1285 9613 3 0 0 chr13 91873986 91874982 -28409330 + L1Md_A LINE L1 5587 6582 0 5 1285 234 0 0 0 chr13 91874994 91875020 -28409292 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1285 208 243 183 62 chr13 91875352 91875451 -28408861 + MIR SINE MIR 46 155 -113 5 1285 29 28 0 0 chr13 91875454 91875490 -28408822 + AT_rich Low_complexity Low_complexity 1 36 0 5 1285 1895 140 48 42 chr13 91875685 91875990 -28408322 - RLTR15 LTR ERVK 0 359 56 5 1285 180 0 0 0 chr13 91875990 91876010 -28408302 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 5 1285 1895 140 48 42 chr13 91876010 91876061 -28408251 - RLTR15 LTR ERVK -304 55 3 5 1285 205 308 73 46 chr13 91876275 91876384 -28407928 - MER5A DNA MER1_type 0 189 78 5 1285 326 262 117 12 chr13 91876540 91876702 -28407610 + L1MD LINE L1 3387 3565 -2581 5 1285 408 249 109 0 chr13 91876792 91876923 -28407389 + B1F1 SINE Alu 5 149 0 5 1285 360 279 45 0 chr13 91877023 91877162 -28407150 + L1MD LINE L1 3666 3814 -2332 5 1285 1458 217 97 9 chr13 91877906 91878246 -28406066 + ORR1D2 LTR MaLR 1 370 0 5 1285 251 281 0 59 chr13 91878393 91878461 -28405851 + LTR16C LTR ERVL 415 478 -11 5 1285 486 0 0 0 chr13 91879386 91879440 -28404872 + (TA)n Simple_repeat Simple_repeat 2 55 0 5 1285 336 297 154 7 chr13 91879581 91879730 -28404582 + ID_B1 SINE B4 1 171 -53 5 1285 295 158 211 0 chr13 91879673 91879749 -28404563 + PB1D10 SINE Alu 21 112 -5 5 1285 362 266 120 60 chr13 91879925 91880109 -28404203 + B3A SINE B2 1 195 -3 5 1286 180 0 0 0 chr13 91881737 91881757 -28402555 + (CG)n Simple_repeat Simple_repeat 2 21 0 5 1286 252 0 0 0 chr13 91881757 91881784 -28402528 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1286 237 305 41 21 chr13 91882000 91882097 -28402215 + ID_B1 SINE B4 2 100 -124 5 1286 408 252 168 26 chr13 91882274 91882429 -28401883 + MLT1A LTR MaLR 191 367 -7 5 1286 245 247 53 11 chr13 91882710 91882804 -28401508 + L2 LINE L2 2792 2889 -530 5 1286 296 343 36 14 chr13 91883703 91883842 -28400470 + Tigger14a DNA MER2_type 13 154 -170 5 1286 1155 217 84 20 chr13 91884360 91884609 -28399703 - 7SK RNA RNA -66 265 1 5 1286 501 62 0 0 chr13 91884850 91884915 -28399397 + (TG)n Simple_repeat Simple_repeat 1 65 0 5 1286 450 0 0 0 chr13 91884915 91884964 -28399348 + (GA)n Simple_repeat Simple_repeat 1 50 0 5 1286 271 346 96 31 chr13 91885249 91885666 -28398646 + L1MEf LINE L1 565 1008 -5192 5 1286 320 266 104 7 chr13 91885827 91885971 -28398341 + L1MEf LINE L1 1162 1319 -4881 5 1286 279 338 125 47 chr13 91886138 91886552 -28397760 + L2a LINE L2 2913 3416 -10 5 1286 251 111 66 110 chr13 91887438 91887620 -28396692 + (GCATG)n Simple_repeat Simple_repeat 5 178 0 5 1286 307 85 70 108 chr13 91887726 91887911 -28396401 + (GCATG)n Simple_repeat Simple_repeat 1 178 0 5 1286 255 122 0 0 chr13 91888840 91888889 -28395423 + (T)n Simple_repeat Simple_repeat 1 49 0 5 1286 1169 82 0 0 chr13 91888889 91889036 -28395276 - B1_Mus1 SINE Alu 0 148 2 5 1286 1215 61 0 0 chr13 91890274 91890421 -28393891 + B1_Mus2 SINE Alu 1 147 0 5 1286 195 42 0 0 chr13 91890421 91890445 -28393867 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1286 1917 245 67 88 chr13 91890445 91891524 -28392788 - RLTR19-int LTR ERVK -2947 3190 1929 5 1286 274 143 75 142 chr13 91891525 91891562 -28392750 - RLTR19-int LTR ERVK -3554 1968 1925 5 1286 234 0 0 0 chr13 91891562 91891588 -28392724 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 5 1286 274 143 75 142 chr13 91891588 91891626 -28392686 - RLTR19-int LTR ERVK -3598 1924 1897 5 1286 1338 62 79 0 chr13 91891626 91891804 -28392508 - B2_Mm1a SINE B2 -1 192 1 5 1286 274 143 75 142 chr13 91891804 91891833 -28392479 - RLTR19-int LTR ERVK -3626 1896 1870 5 1286 960 209 35 26 chr13 91893067 91893293 -28391019 - RLTR19-int LTR ERVK -4190 1332 1105 5 1286 297 275 124 8 chr13 91897773 91897894 -28386418 - L1MEc LINE L1 -5978 422 288 5 1286 1261 106 11 0 chr13 91898835 91899014 -28385298 + B2_Mm1t SINE B2 2 182 -11 5 1286 255 135 18 55 chr13 91899025 91899080 -28385232 + B2_Mm1t SINE B2 50 102 -91 5 1286 280 60 60 0 chr13 91899081 91899131 -28385181 + B2_Mm2 SINE B2 139 191 -4 5 1286 2177 48 52 0 chr13 91900656 91900925 -28383387 + L1_Mus1 LINE L1 6284 6566 -1 6 1286 1262 32 0 0 chr13 91903354 91903512 -28380800 - B2_Mm1a SINE B2 -34 159 2 6 1286 1087 88 0 39 chr13 91903759 91903913 -28380399 + B1_Mus1 SINE Alu 1 148 0 6 1286 1513 70 0 5 chr13 91905679 91905867 -28378445 - B2_Mm1a SINE B2 -6 187 1 6 1286 375 308 17 0 chr13 91906295 91906415 -28377897 + PB1 SINE Alu 5 126 -1 6 1286 543 101 0 0 chr13 91907092 91907171 -28377141 + (CATA)n Simple_repeat Simple_repeat 2 80 0 6 1286 351 0 0 0 chr13 91907171 91907210 -28377102 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1286 820 119 97 0 chr13 91907298 91907432 -28376880 + B1_Mus1 SINE Alu 2 148 0 6 1286 460 236 0 153 chr13 91907618 91907788 -28376524 + B1F SINE Alu 5 148 -1 6 1286 507 201 17 5 chr13 91907881 91908040 -28376272 + L1M5 LINE L1 5326 5492 -632 6 1286 733 270 62 66 chr13 91908318 91908607 -28375705 - B4A SINE B4 -4 288 1 6 1286 328 295 32 16 chr13 91909236 91909360 -28374952 - L1MA10 LINE L1 -13 6321 6196 6 1286 912 230 60 0 chr13 91912751 91912951 -28371361 + B3 SINE B2 2 213 -3 6 1286 186 71 0 0 chr13 91912981 91913009 -28371303 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1286 8619 31 0 6 chr13 91913021 91914119 -28370193 - L1Md_F2 LINE L1 -4 6578 5487 6 1286 2050 112 72 0 chr13 91914798 91915102 -28369210 - ORR1A3 LTR MaLR 0 326 1 6 1286 186 241 202 12 chr13 91915574 91915658 -28368654 + L2a LINE L2 3302 3401 -25 6 1286 1026 47 0 0 chr13 91916083 91916211 -28368101 + (TTTTC)n Simple_repeat Simple_repeat 4 131 0 6 1286 5197 95 66 99 chr13 91916277 91917200 -28367112 + RLTR13B1 LTR ERVK 1 893 0 6 1286 1306 181 132 21 chr13 91918251 91918584 -28365728 - ORR1D1 LTR MaLR -4 370 1 6 1286 1122 268 102 12 chr13 91918853 91919257 -28365055 - MLT1C LTR MaLR -4 463 24 6 1286 365 136 0 15 chr13 91919918 91919941 -28364371 + polypurine Low_complexity Low_complexity 2 24 0 6 1286 1095 139 0 0 chr13 91919941 91920121 -28364191 + (GGA)n Simple_repeat Simple_repeat 1 180 0 6 1286 365 136 0 15 chr13 91920121 91920164 -28364148 + polypurine Low_complexity Low_complexity 25 67 0 6 1286 404 91 15 0 chr13 91920672 91920738 -28363574 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1286 252 0 0 0 chr13 91921445 91921473 -28362839 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1286 451 243 78 7 chr13 91921531 91921672 -28362640 + MER2 DNA MER2_type 146 296 -49 6 1286 192 329 161 58 chr13 91921965 91922120 -28362192 - MIR SINE MIR -72 190 20 6 1286 216 0 0 0 chr13 91922351 91922375 -28361937 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1286 315 282 13 0 chr13 91923721 91923799 -28360513 + ID4_ SINE ID 2 80 -3 6 1286 501 282 28 43 chr13 91925725 91925936 -28358376 - Tigger7 DNA MER2_type -161 2330 2123 6 1286 233 311 33 11 chr13 91926053 91926144 -28358168 - Tigger7 DNA MER2_type -2343 148 56 6 1286 549 240 0 31 chr13 91926728 91926857 -28357455 - RSINE1 SINE B4 -37 128 4 6 1286 1386 83 0 27 chr13 91926909 91927095 -28357217 - B2_Mm2 SINE B2 -14 181 1 6 1286 387 0 0 0 chr13 91927269 91927312 -28357000 + (CA)n Simple_repeat Simple_repeat 2 44 0 6 1286 261 56 93 0 chr13 91927312 91927366 -28356946 + (CAGAGA)n Simple_repeat Simple_repeat 3 61 0 6 1286 723 276 92 33 chr13 91927615 91927918 -28356394 + Lx8 LINE L1 7152 7472 -1 6 1286 299 372 7 14 chr13 91929048 91929195 -28355117 + LTR40b LTR ERVL 220 365 -97 6 1286 1745 50 129 8 chr13 91929251 91929492 -28354820 + L1_Mus4 LINE L1 6367 6636 0 6 1286 282 106 0 0 chr13 91929686 91929733 -28354579 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 6 1286 746 42 0 0 chr13 91930554 91930649 -28353663 + B2_Mm2 SINE B2 4 98 -97 6 1286 745 146 30 0 chr13 91930649 91930814 -28353498 + CT-rich Low_complexity Low_complexity 2 171 0 6 1286 278 250 123 19 chr13 91931140 91931246 -28353066 + RLTR12B LTR ERVK 379 495 -33 6 1286 268 299 224 0 chr13 91931451 91931585 -28352727 + L2a LINE L2 3244 3407 -19 6 1286 608 222 210 18 chr13 91931731 91932006 -28352306 + ORR1E LTR MaLR 1 344 -35 6 1286 246 62 0 0 chr13 91932161 91932193 -28352119 + (TG)n Simple_repeat Simple_repeat 1 32 0 6 1286 1347 184 55 42 chr13 91932558 91932869 -28351443 - Lx7 LINE L1 0 7696 7382 6 1286 503 252 53 65 chr13 91932902 91933072 -28351240 + B4A SINE B4 42 209 -83 6 1286 306 0 0 0 chr13 91933072 91933106 -28351206 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1286 409 269 82 62 chr13 91933106 91933129 -28351183 + B4 SINE B4 209 238 -54 6 1286 243 0 0 0 chr13 91933210 91933237 -28351075 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 6 1286 470 247 105 49 chr13 91933255 91933287 -28351025 + L1M4 LINE L1 4929 4961 -1185 6 1286 2224 102 41 0 chr13 91933287 91933601 -28350711 - ORR1A2 LTR MaLR 0 327 1 6 1286 470 247 105 49 chr13 91933601 91933892 -28350420 + L1M4 LINE L1 4962 5269 -877 6 1286 182 376 73 11 chr13 91934072 91934263 -28350049 + L2a LINE L2 2977 3179 -247 6 1286 189 0 0 0 chr13 91934882 91934903 -28349409 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1286 1015 162 21 10 chr13 91934903 91935096 -28349216 - B2_Mm2 SINE B2 0 195 1 6 1286 234 272 103 0 chr13 91936384 91936467 -28347845 + PB1D10 SINE Alu 19 111 -9 6 1286 504 0 0 0 chr13 91936504 91936560 -28347752 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1286 967 266 29 0 chr13 91937547 91937791 -28346521 - B4 SINE B4 0 292 42 6 1286 354 45 0 0 chr13 91939171 91939215 -28345097 + (CAA)n Simple_repeat Simple_repeat 1 44 0 6 1286 430 238 133 10 chr13 91939309 91939493 -28344819 - MER104 DNA Tc2 -528 201 6 6 1286 9075 30 0 0 chr13 91941787 91942835 -28341477 + L1Md_F2 LINE L1 4539 5586 -297 6 1286 8730 37 1 5 chr13 91942835 91943835 -28340477 + L1Md_F2 LINE L1 5587 6582 0 6 1286 739 251 0 26 chr13 91943835 91943855 -28340457 + L1M5 LINE L1 5616 5631 -813 6 1286 836 204 7 7 chr13 91944188 91944336 -28339976 + B1F2 SINE Alu 2 149 0 6 1286 429 54 0 0 chr13 91944340 91944396 -28339916 + (CCAA)n Simple_repeat Simple_repeat 4 59 0 6 1286 693 192 6 107 chr13 91944587 91944756 -28339556 + B3 SINE B2 25 176 -40 6 1286 189 331 33 86 chr13 91945036 91945188 -28339124 + MIRb SINE MIR 48 191 -77 6 1286 1225 55 0 7 chr13 91946337 91946485 -28337827 - B1_Mus2 SINE Alu 0 147 1 6 1286 1223 66 0 5 chr13 91947592 91947804 -28336508 + (GA)n Simple_repeat Simple_repeat 1 211 0 6 1286 1152 30 45 0 chr13 91948810 91948942 -28335370 + B1_Mm SINE Alu 1 138 -9 6 1286 960 134 0 0 chr13 91948973 91949107 -28335205 + B1_Mm SINE Alu 2 135 -12 6 1286 216 0 0 0 chr13 91949109 91949133 -28335179 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1286 393 276 54 16 chr13 91949459 91949588 -28334724 - MIRb SINE MIR -89 179 46 6 1286 279 211 123 3 chr13 91950062 91950152 -28334160 - B4 SINE B4 -65 100 1 6 1286 4621 32 2 2 chr13 91950486 91950989 -28333323 + RLTR1C LTR ERV1 1 503 0 6 1286 439 234 73 18 chr13 91951745 91951854 -28332458 + PB1D10 SINE Alu 2 116 -1 6 1286 1285 42 0 0 chr13 91951967 91952109 -28332203 + B1_Mm SINE Alu 1 142 -5 6 1286 432 0 0 0 chr13 91952112 91952160 -28332152 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 6 1286 928 355 4 0 chr13 91952184 91952449 -28331863 + B4A SINE B4 2 267 -25 6 1286 259 318 132 18 chr13 91952762 91953034 -28331278 - L1MD2 LINE L1 -6212 335 33 6 1286 36171 36 0 0 chr13 91954785 91960212 -28324100 + L1Md_T LINE L1 66 5589 -297 6 1286 9565 6 0 0 chr13 91960212 91961208 -28323104 + L1Md_T LINE L1 5590 6585 0 6 1286 241 262 62 0 chr13 91961926 91962006 -28322306 + L1MB3 LINE L1 6066 6150 -33 6 1286 444 75 327 27 chr13 91962044 91962154 -28322158 - B2_Mm2 SINE B2 -6 189 47 6 1286 1057 109 25 13 chr13 91962210 91962368 -28321944 - B2_Mm1t SINE B2 -33 160 1 6 1286 737 154 146 0 chr13 91962540 91962670 -28321642 - B1_Mur4 SINE Alu -1 149 1 6 1286 972 216 27 53 chr13 91963952 91964113 -28320199 - MTD LTR MaLR -8 411 255 6 1286 791 173 159 50 chr13 91964113 91964314 -28319998 + URR1B DNA MER1_type 1 223 -2 6 1286 972 216 27 53 chr13 91964314 91964377 -28319935 - MTD LTR MaLR -165 254 193 6 1286 228 300 100 0 chr13 91965319 91965429 -28318883 - L1MA4A LINE L1 -334 5969 5849 6 1286 1475 266 253 15 chr13 91965422 91966026 -28318286 - Lx5 LINE L1 -88 6962 6215 6 1286 4724 170 11 38 chr13 91966017 91966924 -28317388 - L1_Mur2 LINE L1 -439 5438 4556 6 1286 632 305 60 19 chr13 91967096 91967410 -28316902 - L1_Mur3 LINE L1 -506 5374 5048 6 1286 2090 149 69 11 chr13 91967495 91967842 -28316470 - ORR1B2 LTR MaLR 0 367 1 6 1286 18868 172 105 48 chr13 91967906 91970129 -28314183 - L1_Mur3 LINE L1 0 5880 3335 6 1286 217 0 29 29 chr13 91970129 91970163 -28314149 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1286 1241 69 0 0 chr13 91970165 91970309 -28314003 - B1_Mus1 SINE Alu -3 145 2 6 1286 18868 187 109 44 chr13 91970309 91973073 -28311239 - L1_Mur3 LINE L1 -2546 3334 582 6 1286 231 61 0 0 chr13 91973148 91973181 -28311131 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 6 1286 1076 230 14 5 chr13 91973473 91973683 -28310629 + B3 SINE B2 2 213 -3 6 1286 254 292 153 16 chr13 91973720 91973974 -28310338 - L1MEc LINE L1 -4804 1596 1308 6 1286 32520 79 8 10 chr13 91974498 91976333 -28307979 - L1_Mus1 LINE L1 -1 6566 4745 6 1286 1813 21 0 0 chr13 91976333 91976525 -28307787 - B2_Mm1a SINE B2 0 193 2 6 1286 32520 99 9 12 chr13 91976525 91980218 -28304094 - L1_Mus1 LINE L1 -1139 4744 1052 6 1286 245 324 0 53 chr13 91980614 91980689 -28303623 - tRNA-Ala-GCY_ tRNA tRNA -4 71 1 6 1286 299 270 81 58 chr13 91980694 91980867 -28303445 + MER112 DNA MER1_type 71 247 -14 6 1286 330 169 0 0 chr13 91981020 91981079 -28303233 + RLTR10D LTR ERVK 1 59 -300 7 1286 4709 55 5 19 chr13 91981126 91981716 -28302596 - L1Md_F2 LINE L1 -1 6581 6000 7 1286 6868 35 3 0 chr13 91981716 91982656 -28301656 + L1Md_F2 LINE L1 5059 6001 -581 7 1286 1067 229 53 44 chr13 91982656 91982975 -28301337 + RLTR10D LTR ERVK 38 359 0 7 1286 25580 145 34 3 chr13 91983389 91989132 -28295180 + L1_Mus4 LINE L1 709 6631 -5 7 1286 777 163 31 0 chr13 91989146 91989275 -28295037 + B1_Mus1 SINE Alu 6 138 -10 7 1286 315 291 66 90 chr13 91989275 91989312 -28295000 + MT2B2 LTR ERVL 170 331 -253 7 1286 6033 121 7 6 chr13 91990063 91990921 -28293391 - Lx2 LINE L1 0 6997 6139 7 1286 2179 103 242 11 chr13 91991312 91991675 -28292637 + LTRIS5 LTR ERV1 1 447 0 7 1286 473 293 116 20 chr13 91992499 91992750 -28291562 + MER89 LTR ERV1 271 545 -14 7 1286 549 0 0 0 chr13 91993256 91993317 -28290995 + (GA)n Simple_repeat Simple_repeat 1 61 0 7 1286 423 0 0 0 chr13 91993626 91993673 -28290639 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1286 306 0 0 0 chr13 91993673 91993706 -28290606 + (GA)n Simple_repeat Simple_repeat 1 34 0 7 1286 697 260 38 33 chr13 91993794 91993977 -28290335 - B3 SINE B2 -5 211 28 7 1286 216 0 0 0 chr13 91995634 91995658 -28288654 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 7 1286 694 241 58 0 chr13 91995671 91995808 -28288504 + B1_Mur1 SINE Alu 5 149 0 7 1286 478 329 71 58 chr13 91995822 91996132 -28288180 - MLT1A LTR MaLR -40 334 21 7 1286 2877 34 0 0 chr13 91996359 91996682 -28287630 - L1Md_A LINE L1 0 6582 6260 7 1286 307 264 212 23 chr13 91996793 91996925 -28287387 + MLT1J1 LTR MaLR 1 157 -287 7 1286 1666 42 0 10 chr13 91996931 91997123 -28287189 - B2_Mm1a SINE B2 -3 190 1 7 1286 217 349 0 0 chr13 91997264 91997327 -28286985 + RSINE1 SINE B4 18 80 -85 7 1286 214 175 15 31 chr13 91997375 91997440 -28286872 + A-rich Low_complexity Low_complexity 6 69 0 7 1286 223 265 14 0 chr13 91998115 91998187 -28286125 + MIRb SINE MIR 188 256 -6 7 1286 985 186 47 38 chr13 91998505 91998717 -28285595 + B3 SINE B2 3 216 0 7 1286 513 0 0 0 chr13 91999197 91999254 -28285058 + (TC)n Simple_repeat Simple_repeat 1 57 0 7 1286 464 0 18 0 chr13 91999254 91999309 -28285003 + (CA)n Simple_repeat Simple_repeat 1 57 0 7 1286 197 234 46 115 chr13 91999646 91999733 -28284579 + MER5B DNA MER1_type 1 81 -97 7 1286 406 195 24 0 chr13 92000128 92000210 -28284102 + PB1D9 SINE Alu 31 114 -6 1 1286 598 185 6 0 chr13 92000515 92000623 -28283689 + Lx4B LINE L1 6826 6944 -114 2 1286 1074 90 0 0 chr13 92003304 92003482 -28280830 + (GA)n Simple_repeat Simple_repeat 1 178 0 3 1286 546 48 12 0 chr13 92004134 92004217 -28280095 - L1Md_F3 LINE L1 -2 6582 6499 4 1286 1010 203 18 41 chr13 92004490 92004711 -28279601 + B3 SINE B2 1 216 0 5 1286 22 56 0 0 chr13 92005697 92005733 -28278579 + AT_rich Low_complexity Low_complexity 1 36 0 6 1286 323 317 9 19 chr13 92005787 92005893 -28278419 + B1_Mus1 SINE Alu 3 107 -41 7 1286 413 298 21 45 chr13 92005986 92006229 -28278083 + L1MEd LINE L1 980 1216 -4903 8 1286 1326 162 9 5 chr13 92009282 92009505 -28274807 - URR1B DNA MER1_type 0 225 2 9 1286 221 0 35 0 chr13 92009787 92009816 -28274496 + (TCTCC)n Simple_repeat Simple_repeat 1 30 0 1 1286 644 224 11 0 chr13 92009816 92009990 -28274322 + T-rich Low_complexity Low_complexity 2 177 0 1 1286 492 174 0 0 chr13 92010346 92010438 -28273874 + CT-rich Low_complexity Low_complexity 2 93 0 1 1286 218 375 48 21 chr13 92010941 92011129 -28273183 - MIRb SINE MIR -29 239 47 1 1286 1283 186 100 13 chr13 92011676 92011975 -28272337 - RMER19B LTR ERVK 0 902 578 1 1287 273 98 0 0 chr13 92012736 92012777 -28271535 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1287 207 0 0 0 chr13 92015995 92016018 -28268294 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 1 1287 1056 59 7 0 chr13 92016019 92016155 -28268157 - B1_Mus1 SINE Alu -11 137 1 1 1287 3013 58 88 10 chr13 92018686 92019086 -28265226 - L1_Mus1 LINE L1 -6 6561 6131 1 1287 1895 115 81 47 chr13 92019172 92019556 -28264756 - RMER6B LTR ERVK -64 397 1 1 1287 407 273 111 16 chr13 92020256 92020446 -28263866 - MIRc SINE MIR -13 255 48 2 1287 564 220 78 7 chr13 92024745 92024887 -28259425 - MTD LTR MaLR 0 419 268 2 1287 387 0 0 0 chr13 92024891 92024934 -28259378 + (TTTTA)n Simple_repeat Simple_repeat 5 47 0 2 1287 453 50 12 36 chr13 92025693 92025776 -28258536 + (CAAAAA)n Simple_repeat Simple_repeat 4 84 0 2 1287 339 286 0 0 chr13 92027600 92027677 -28256635 - ID4 SINE ID -5 78 2 2 1287 288 0 0 0 chr13 92028731 92028763 -28255549 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1287 486 0 0 0 chr13 92028767 92028821 -28255491 + (GA)n Simple_repeat Simple_repeat 2 55 0 2 1287 456 19 0 0 chr13 92030986 92031039 -28253273 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1287 359 310 80 0 chr13 92031766 92031866 -28252446 + B4A SINE B4 1 108 -184 2 1287 270 304 98 37 chr13 92031866 92031930 -28252382 + B3A SINE B2 1 174 -24 2 1287 333 253 0 13 chr13 92033173 92033249 -28251063 - ID4 SINE ID 0 83 9 3 1287 1153 56 0 27 chr13 92033777 92033924 -28250388 + B1_Mus1 SINE Alu 1 143 -5 3 1287 281 206 277 40 chr13 92036097 92036198 -28248114 + RMER20B LTR ERVK 1 125 -502 3 1287 3613 80 20 11 chr13 92036337 92036880 -28247432 + RMER17B LTR ERVK 1 548 -410 3 1287 8376 126 51 20 chr13 92036880 92038468 -28245844 + Lx2B LINE L1 5354 6999 -1 3 1287 1056 183 228 0 chr13 92038962 92039252 -28245060 + ORR1D1 LTR MaLR 7 362 -12 3 1287 1085 60 0 0 chr13 92039331 92039464 -28244848 - B1_Mus1 SINE Alu -11 137 5 3 1287 516 270 36 7 chr13 92039825 92039963 -28244349 - B1F SINE Alu 0 149 8 3 1287 316 252 101 39 chr13 92040093 92040223 -28244089 - B3A SINE B2 0 216 81 3 1287 1929 146 13 84 chr13 92040313 92040694 -28243618 + ORR1B1 LTR MaLR 41 394 0 3 1287 544 312 76 31 chr13 92041106 92041331 -28242981 + MLT1C LTR MaLR 148 382 -85 4 1287 434 216 124 18 chr13 92041366 92041479 -28242833 + RMER13B LTR ERVK 784 908 0 4 1287 1185 75 0 0 chr13 92043086 92043247 -28241065 + (TGGA)n Simple_repeat Simple_repeat 4 164 0 4 1287 1858 150 20 61 chr13 92043247 92043589 -28240723 + ORR1A4 LTR MaLR 2 329 0 4 1287 461 247 6 0 chr13 92043593 92043759 -28240553 + (TGGA)n Simple_repeat Simple_repeat 4 170 0 4 1287 322 143 56 28 chr13 92043868 92043940 -28240372 + L1MC4 LINE L1 7163 7236 -806 4 1287 476 240 90 53 chr13 92043976 92044165 -28240147 + Lx5 LINE L1 6855 7050 0 4 1287 486 0 0 0 chr13 92044534 92044588 -28239724 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1287 2101 134 84 13 chr13 92045355 92045748 -28238564 + MTC LTR MaLR 1 421 0 4 1287 751 317 102 38 chr13 92046283 92046814 -28237498 + Lx8 LINE L1 6908 7472 -1 4 1287 769 255 98 5 chr13 92047467 92047660 -28236652 - B3 SINE B2 -5 211 1 5 1287 4098 180 32 31 chr13 92048845 92049681 -28234631 + RMER13B LTR ERVK 1 837 -71 5 1287 487 264 16 8 chr13 92049829 92049955 -28234357 + ID_B1 SINE B4 81 207 -17 5 1287 223 309 0 12 chr13 92050031 92050113 -28234199 + BC1_Mm scRNA scRNA 15 95 -57 5 1287 364 262 234 0 chr13 92050649 92050790 -28233522 - RMER30 DNA MER1_type -7 195 22 5 1287 2107 103 18 62 chr13 92052598 92052939 -28231373 - ORR1A3 LTR MaLR 0 326 1 5 1287 220 340 47 37 chr13 92054555 92054769 -28229543 + MIR SINE MIR 18 233 -29 5 1287 197 242 0 88 chr13 92054733 92054801 -28229511 + L2a LINE L2 3357 3418 -8 5 1287 23 0 0 0 chr13 92055516 92055539 -28228773 + AT_rich Low_complexity Low_complexity 1 23 0 5 1287 201 74 0 0 chr13 92055563 92055590 -28228722 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 5 1287 651 67 0 28 chr13 92058884 92058992 -28225320 + L1Md_F2 LINE L1 6475 6579 -3 6 1287 481 256 33 43 chr13 92060003 92060187 -28224125 + L1MA7 LINE L1 6110 6291 0 6 1287 245 235 58 58 chr13 92060287 92060391 -28223921 + MIR SINE MIR 159 262 0 6 1287 476 233 0 0 chr13 92061204 92061290 -28223022 - Lx8 LINE L1 -181 7292 7207 6 1287 263 272 19 6 chr13 92061820 92061979 -28222333 + (TG)n Simple_repeat Simple_repeat 1 161 0 6 1287 304 235 25 0 chr13 92062003 92062122 -28222190 + (TATG)n Simple_repeat Simple_repeat 1 122 0 6 1287 238 348 0 0 chr13 92062137 92062206 -28222106 + (TG)n Simple_repeat Simple_repeat 2 70 0 6 1287 1490 186 48 74 chr13 92062992 92063411 -28220901 + RMER17C LTR ERVK 3 410 0 6 1287 8224 75 5 2 chr13 92064759 92065992 -28218320 - L1_Mus3 LINE L1 0 6638 5403 6 1287 185 323 16 31 chr13 92066610 92066674 -28217638 - MIRm SINE MIR -99 177 115 6 1287 251 230 0 47 chr13 92067196 92067260 -28217052 - RLTR25A LTR ERVK -523 580 520 7 1287 547 200 11 0 chr13 92067204 92067299 -28217013 - B1_Mur4 SINE Alu -49 101 6 7 1287 257 313 11 78 chr13 92067222 92067312 -28217000 - B4A SINE B4 -125 167 84 7 1287 432 0 0 0 chr13 92068197 92068245 -28216067 + (TTA)n Simple_repeat Simple_repeat 1 48 0 7 1287 1479 152 36 18 chr13 92070271 92070545 -28213767 + ORR1A4 LTR MaLR 51 329 0 7 1287 269 244 13 0 chr13 92071919 92072008 -28212304 - L1M4 LINE L1 -3478 2668 2576 7 1287 337 249 219 54 chr13 92072265 92072635 -28211677 - L1M4 LINE L1 -3595 2551 2121 7 1287 3308 279 35 9 chr13 92072750 92073643 -28210669 + Lx8 LINE L1 6513 7428 -45 7 1287 1672 212 52 21 chr13 92073659 92074044 -28210268 + MTD LTR MaLR 10 406 -13 7 1287 295 310 204 54 chr13 92074161 92074495 -28209817 - MLT1D LTR MaLR -69 436 53 7 1287 400 169 0 0 chr13 92074800 92074871 -28209441 - ORR1D2 LTR MaLR -7 363 293 7 1287 429 20 0 0 chr13 92075749 92075799 -28208513 + (TG)n Simple_repeat Simple_repeat 2 51 0 8 1287 270 321 120 30 chr13 92076004 92076171 -28208141 - MIRb SINE MIR -17 251 70 8 1287 1195 236 80 72 chr13 92076351 92076725 -28207587 + MTE2b LTR MaLR 1 377 -2 8 1287 318 250 42 0 chr13 92077064 92077136 -28207176 + ID4_ SINE ID 7 81 -2 8 1287 340 310 78 0 chr13 92079135 92079264 -28205048 + B1_Mur1 SINE Alu 1 139 -10 8 1287 265 250 83 0 chr13 92079277 92079349 -28204963 + ID4 SINE ID 6 83 0 8 1287 180 0 0 0 chr13 92079455 92079475 -28204837 + (T)n Simple_repeat Simple_repeat 1 20 0 8 1287 2478 160 68 31 chr13 92080495 92081036 -28203276 + RLTR31_Mm LTR ERVK 1 561 0 8 1287 917 234 246 19 chr13 92081335 92081644 -28202668 + MTEa LTR MaLR 1 379 0 8 1287 1225 187 9 0 chr13 92081913 92082132 -28202180 + URR1B DNA MER1_type 5 225 0 8 1287 468 0 0 0 chr13 92082759 92082811 -28201501 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 9 1287 225 0 0 0 chr13 92083775 92083800 -28200512 + (TAA)n Simple_repeat Simple_repeat 2 26 0 9 1287 1319 313 30 18 chr13 92083803 92084580 -28199732 + Lx8 LINE L1 6273 7143 -330 9 1287 3067 177 24 7 chr13 92085079 92085911 -28198401 + L1_Mur3 LINE L1 925 1771 -4106 9 1287 225 0 0 0 chr13 92085911 92085936 -28198376 + (T)n Simple_repeat Simple_repeat 1 25 0 9 1287 6264 10 0 0 chr13 92085936 92086682 -28197630 + L1Md_T LINE L1 5177 5922 -660 9 1287 20947 146 20 42 chr13 92086679 92090588 -28193724 + L1_Mur3 LINE L1 1758 5580 -297 9 1287 9087 9 0 0 chr13 92090588 92091584 -28192728 + L1Md_T LINE L1 5587 6582 0 9 1287 7199 161 14 23 chr13 92091588 92093209 -28191103 + Lx5 LINE L1 4595 6221 -829 9 1287 3571 215 24 3 chr13 92093224 92093933 -28190379 + Lx5 LINE L1 6322 7045 -5 9 1287 340 289 0 11 chr13 92093956 92094047 -28190265 + Lx8 LINE L1 7135 7224 -249 9 1287 480 253 113 78 chr13 92094156 92094413 -28189899 + Lx8 LINE L1 7208 7473 0 9 1287 315 318 8 15 chr13 92095757 92095888 -28188424 + Charlie8 DNA MER1_type 24 153 -2275 9 1287 698 276 138 60 chr13 92096452 92096822 -28187490 - MTD LTR MaLR -15 404 6 1 1287 312 292 58 0 chr13 92096885 92097022 -28187290 + L1MD LINE L1 4129 4273 -1873 1 1287 314 283 44 0 chr13 92097032 92097145 -28187167 + L1MB8 LINE L1 4478 4595 -1551 1 1287 1863 157 33 18 chr13 92097146 92097483 -28186829 + Lx5 LINE L1 6706 7047 -3 1 1287 488 318 119 85 chr13 92097561 92098538 -28185774 + L1MCa LINE L1 3 1085 -5666 1 1287 636 304 59 27 chr13 92098538 92098913 -28185399 - MLT1B LTR MaLR -3 387 1 1 1287 488 281 158 81 chr13 92098913 92099276 -28185036 + L1MCa LINE L1 1086 1479 -5272 1 1287 957 267 126 37 chr13 92099370 92099832 -28184480 + L1MB8 LINE L1 5621 6123 -55 1 1287 658 248 21 0 chr13 92099895 92100036 -28184276 - RSINE1 SINE B4 -13 152 9 1 1287 721 38 105 0 chr13 92100060 92100165 -28184147 + LTRIS5 LTR ERV1 1 116 -331 1 1287 975 121 35 22 chr13 92100162 92100370 -28183942 + LTRIS5 LTR ERV1 227 512 0 1 1287 22787 63 2 10 chr13 92100597 92103538 -28180774 + L1Md_F2 LINE L1 2669 5586 -297 1 1287 8311 40 6 0 chr13 92103538 92104526 -28179786 + L1Md_F2 LINE L1 5587 6580 -2 1 1287 260 301 38 106 chr13 92105798 92105874 -28178438 + Arthur1A DNA Tip100 29 106 -71 1 1287 549 250 73 0 chr13 92105874 92106010 -28178302 - B1_Mur2 SINE Alu -1 148 3 1 1287 260 301 38 106 chr13 92106010 92106093 -28178219 + Arthur1A DNA Tip100 107 177 0 1 1287 253 333 75 15 chr13 92106592 92106793 -28177519 - L2a LINE L2 0 3426 3214 1 1287 235 0 57 0 chr13 92108086 92108121 -28176191 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1287 827 284 84 19 chr13 92108146 92108214 -28176098 - L1MA9 LINE L1 -118 6173 6093 1 1287 204 40 0 0 chr13 92108214 92108239 -28176073 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1 1287 827 264 45 16 chr13 92108239 92108503 -28175809 - L1MA9 LINE L1 -220 6092 5820 1 1287 936 280 122 7 chr13 92108777 92109259 -28175053 + L1MB7 LINE L1 5628 6184 0 1 1287 211 300 0 0 chr13 92109299 92109349 -28174963 + ID4 SINE ID 18 67 -16 1 1287 798 251 76 33 chr13 92109403 92109679 -28174633 + B4A SINE B4 3 290 -2 1 1287 252 0 0 0 chr13 92109692 92109720 -28174592 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1287 712 173 31 19 chr13 92110101 92110358 -28173954 + (TAGA)n Simple_repeat Simple_repeat 1 259 0 1 1287 21 0 0 0 chr13 92111498 92111519 -28172793 + AT_rich Low_complexity Low_complexity 1 21 0 1 1287 370 297 58 31 chr13 92112390 92112581 -28171731 - MER3 DNA MER1_type -9 200 5 1 1287 435 132 11 21 chr13 92112636 92112656 -28171656 + polypyrimidine Low_complexity Low_complexity 75 95 0 1 1287 916 67 0 73 chr13 92112656 92112848 -28171464 + (TTTCC)n Simple_repeat Simple_repeat 3 180 0 1 1287 435 132 11 21 chr13 92112848 92112920 -28171392 + CT-rich Low_complexity Low_complexity 4 74 0 1 1287 4293 103 27 114 chr13 92114271 92115094 -28169218 - RMER17A LTR ERVK 0 751 1 1 1287 345 229 200 0 chr13 92116653 92116758 -28167554 + MLT1A1 LTR MaLR 1 126 -282 1 1287 255 291 17 25 chr13 92117123 92117243 -28167069 + (TATATG)n Simple_repeat Simple_repeat 4 122 0 1 1287 268 321 4 0 chr13 92117248 92117492 -28166820 + (TG)n Simple_repeat Simple_repeat 1 245 0 1 1287 308 211 0 22 chr13 92117508 92117600 -28166712 + (TATATG)n Simple_repeat Simple_repeat 3 92 0 1 1287 288 189 38 0 chr13 92117638 92117691 -28166621 + L1MB2 LINE L1 5650 5704 -464 1 1287 670 242 132 4 chr13 92117697 92117925 -28166387 + L1MB2 LINE L1 5810 6066 -105 1 1287 876 83 175 0 chr13 92118100 92118220 -28166092 - B1_Mus1 SINE Alu -7 141 1 1 1287 1479 178 4 0 chr13 92118823 92119048 -28165264 + Lx4A LINE L1 6819 7044 -14 1 1287 410 0 0 20 chr13 92119048 92119099 -28165213 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1 1287 2625 174 39 43 chr13 92119133 92119696 -28164616 + RLTR31_Mm LTR ERVK 1 561 0 1 1287 1008 244 13 18 chr13 92120258 92120483 -28163829 - MTEb LTR MaLR -32 347 124 1 1287 268 340 21 11 chr13 92120586 92120681 -28163631 - MIRm SINE MIR -19 257 162 1 1287 2046 183 97 75 chr13 92120753 92121302 -28163010 + RLTR31A_Mm LTR ERVK 1 561 0 1 1287 376 351 0 43 chr13 92121459 92121575 -28162737 + PB1D7 SINE Alu 1 111 -9 1 1287 210 241 17 17 chr13 92122817 92122876 -28161436 + (TAA)n Simple_repeat Simple_repeat 2 60 0 1 1287 188 154 0 19 chr13 92123929 92123982 -28160330 + (TTTA)n Simple_repeat Simple_repeat 3 54 0 1 1287 440 152 0 0 chr13 92124055 92124121 -28160191 - RSINE1 SINE B4 -32 133 68 1 1287 22 0 0 0 chr13 92124239 92124261 -28160051 + AT_rich Low_complexity Low_complexity 1 22 0 1 1287 1152 204 24 0 chr13 92126647 92126853 -28157459 + B3 SINE B2 2 212 -4 1 1287 477 0 0 0 chr13 92127746 92127799 -28156513 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1287 432 0 0 0 chr13 92127799 92127846 -28156466 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1287 271 258 0 15 chr13 92127986 92128053 -28156259 - BC1_Mm scRNA scRNA -60 92 27 1 1287 481 316 64 6 chr13 92130110 92130266 -28154046 - MTE2b LTR MaLR -214 165 1 1 1287 21 71 0 0 chr13 92131502 92131544 -28152768 + AT_rich Low_complexity Low_complexity 1 42 0 1 1287 1070 214 24 0 chr13 92131767 92131977 -28152335 - B3 SINE B2 0 216 2 1 1287 27 29 0 0 chr13 92131979 92132013 -28152299 + AT_rich Low_complexity Low_complexity 1 34 0 1 1287 1283 213 93 42 chr13 92132210 92132549 -28151763 - MTC LTR MaLR -25 396 55 1 1287 282 56 0 0 chr13 92132571 92132607 -28151705 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1 1287 812 161 0 8 chr13 92133341 92133472 -28150840 + B3 SINE B2 1 130 -86 1 1287 333 0 0 0 chr13 92133505 92133542 -28150770 + (TAAAA)n Simple_repeat Simple_repeat 5 41 0 1 1287 902 137 33 15 chr13 92134614 92134888 -28149424 + (TAGA)n Simple_repeat Simple_repeat 1 279 0 1 1287 372 43 0 0 chr13 92134891 92134937 -28149375 + (CAGA)n Simple_repeat Simple_repeat 2 47 0 1 1287 686 255 112 63 chr13 92135163 92135448 -28148864 + MER2 DNA MER2_type 40 338 -7 1 1287 267 31 0 0 chr13 92135736 92135768 -28148544 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1287 499 228 17 42 chr13 92135827 92135842 -28148470 - RSINE1 SINE B4 0 165 151 1 1287 360 0 0 0 chr13 92135842 92135882 -28148430 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1287 499 228 17 42 chr13 92135882 92135985 -28148327 - RSINE1 SINE B4 -15 150 50 1 1287 225 353 103 0 chr13 92137202 92137270 -28147042 - ID4_ SINE ID -7 76 2 1 1292 281 45 0 62 chr13 92791665 92791713 -27492599 + (A)n Simple_repeat Simple_repeat 1 45 0 1 1292 279 133 0 0 chr13 92797285 92797330 -27486982 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1292 408 183 0 12 chr13 92798243 92798326 -27485986 + ID4_ SINE ID 2 83 0 3 1293 396 0 0 0 chr13 92799919 92799963 -27484349 + (CA)n Simple_repeat Simple_repeat 2 45 0 4 1293 318 271 103 43 chr13 92800027 92800212 -27484100 + L2a LINE L2 3171 3366 -60 5 1293 22 70 0 0 chr13 92801149 92801192 -27483120 + AT_rich Low_complexity Low_complexity 1 43 0 6 1293 273 29 0 0 chr13 92801273 92801307 -27483005 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1293 264 292 0 0 chr13 92801356 92801421 -27482891 - ID4 SINE ID -18 65 1 8 1293 778 263 33 5 chr13 92801437 92801647 -27482665 - B3 SINE B2 0 216 1 9 1293 696 279 72 42 chr13 92801647 92801954 -27482358 - L1MB2 LINE L1 -42 6129 5814 1 1293 7888 69 2 2 chr13 92801949 92803538 -27480774 - L1Md_F2 LINE L1 -1 6581 4993 1 1293 700 266 93 37 chr13 92803535 92803992 -27480320 - L1MB2 LINE L1 -384 5794 5292 1 1293 210 71 0 0 chr13 92804000 92804028 -27480284 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1 1293 25 0 0 0 chr13 92804230 92804255 -27480057 + AT_rich Low_complexity Low_complexity 1 25 0 1 1293 459 0 0 0 chr13 92807761 92807812 -27476500 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1293 468 0 0 0 chr13 92807812 92807863 -27476449 + (GA)n Simple_repeat Simple_repeat 2 53 0 1 1293 2705 154 35 12 chr13 92808840 92809352 -27474960 + RLTR11A2 LTR ERVK 1 524 -3 1 1293 305 289 111 19 chr13 92809721 92809883 -27474429 - MIRb SINE MIR -63 205 29 1 1293 1328 151 18 0 chr13 92810606 92810824 -27473488 + URR1A DNA MER1_type 5 226 0 1 1293 248 277 15 0 chr13 92811632 92811697 -27472615 + MLT1F2 LTR MaLR 138 203 -357 1 1293 1263 33 0 0 chr13 92813871 92814023 -27470289 + (CTA)n Simple_repeat Simple_repeat 1 152 0 2 1293 182 289 201 31 chr13 92814391 92814645 -27469667 - L2 LINE L2 -359 3060 2764 2 1293 18359 120 11 8 chr13 92816253 92818805 -27465507 + L1_Mm LINE L1 2177 4733 -1150 2 1293 276 0 68 0 chr13 92818805 92818849 -27465463 + (CAA)n Simple_repeat Simple_repeat 2 48 0 2 1293 18359 120 11 8 chr13 92818849 92819125 -27465187 + L1_Mm LINE L1 4734 5012 -871 2 1293 5235 77 7 3 chr13 92819122 92819811 -27464501 + L1_Mus3 LINE L1 5927 6618 -20 2 1293 222 340 52 0 chr13 92821797 92821894 -27462418 + MIRb SINE MIR 119 220 -48 2 1293 198 0 0 0 chr13 92821976 92821998 -27462314 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1293 1972 201 50 10 chr13 92822398 92822801 -27461511 + MTD LTR MaLR 1 419 0 2 1293 448 300 41 26 chr13 92824287 92824482 -27459830 + L1ME1 LINE L1 5706 5903 -276 2 1293 596 246 34 17 chr13 92824504 92824682 -27459630 + B3A SINE B2 16 196 -2 2 1293 1597 266 60 31 chr13 92824865 92825250 -27459062 - Lx7 LINE L1 -891 6805 6409 3 1293 2410 159 45 5 chr13 92825250 92825654 -27458658 + MTC LTR MaLR 1 420 -1 3 1293 1597 266 60 31 chr13 92825654 92825715 -27458597 - Lx7 LINE L1 -1288 6408 6347 3 1293 1007 268 68 39 chr13 92825718 92826184 -27458128 + Lx7 LINE L1 7036 7696 0 3 1293 345 221 124 21 chr13 92826942 92827039 -27457273 - L1MC2 LINE L1 -180 6164 6058 3 1293 431 175 32 9 chr13 92827017 92827123 -27457189 + L1MB7 LINE L1 6010 6118 -56 3 1293 207 360 78 31 chr13 92827607 92827736 -27456576 + MIRb SINE MIR 115 249 -19 3 1293 543 192 0 0 chr13 92828145 92828249 -27456063 + B1_Mur4 SINE Alu 1 104 -46 3 1293 369 0 0 0 chr13 92828251 92828292 -27456020 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1293 306 0 0 0 chr13 92828292 92828325 -27455987 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 1293 342 247 39 0 chr13 92828399 92828476 -27455836 - RSINE1 SINE B4 -82 83 4 3 1293 22 0 0 0 chr13 92828576 92828598 -27455714 + AT_rich Low_complexity Low_complexity 1 22 0 4 1293 316 298 117 0 chr13 92828973 92829067 -27455245 + B3A SINE B2 4 108 -90 4 1293 471 18 0 0 chr13 92829079 92829135 -27455177 + (CA)n Simple_repeat Simple_repeat 1 56 0 4 1293 369 0 0 0 chr13 92829171 92829212 -27455100 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 4 1293 436 255 38 0 chr13 92831390 92831496 -27452816 + B1F SINE Alu 14 123 -26 4 1293 657 165 0 0 chr13 92831498 92831619 -27452693 + (TAGA)n Simple_repeat Simple_repeat 1 121 0 4 1293 223 246 154 0 chr13 92831647 92831712 -27452600 + ID4_ SINE ID 2 76 -7 4 1293 1158 66 0 0 chr13 92831713 92831865 -27452447 + (GGAA)n Simple_repeat Simple_repeat 4 155 0 4 1293 26653 75 25 5 chr13 92832162 92836520 -27447792 - L1Md_F2 LINE L1 0 6582 2139 4 1293 526 114 0 0 chr13 92836518 92836597 -27447715 - L1Md_F2 LINE L1 -6058 558 480 4 1293 1629 123 11 51 chr13 92836598 92836872 -27447440 - L1VL1 LINE L1 -6157 265 3 4 1293 1446 100 16 0 chr13 92836876 92837066 -27447246 - B2_Mm2 SINE B2 -2 193 1 5 1293 333 0 0 0 chr13 92837321 92837358 -27446954 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1293 233 0 0 0 chr13 92837512 92837539 -27446773 + URR1B DNA MER1_type 199 225 0 5 1293 511 136 49 0 chr13 92837541 92837622 -27446690 - B1_Mur2 SINE Alu -55 94 10 5 1293 274 220 38 133 chr13 92837622 92837642 -27446670 - MT2B LTR ERVL -352 245 155 5 1293 827 317 81 83 chr13 92837820 92838315 -27445997 + Tigger7 DNA MER2_type 9 502 -48 5 1293 705 170 56 113 chr13 92838911 92839099 -27445213 + ORR1C2 LTR MaLR 1 159 -225 5 1293 3257 92 25 0 chr13 92839099 92839546 -27444766 + L1VL4 LINE L1 217 674 -5628 5 1293 1173 185 90 0 chr13 92839546 92839768 -27444544 + ORR1C2 LTR MaLR 143 384 0 5 1293 1238 69 0 0 chr13 92841178 92841323 -27442989 - B1_Mm SINE Alu -1 146 2 5 1293 1821 200 227 57 chr13 92841718 92842438 -27441874 - RMER6C LTR ERVK -15 705 1 5 1293 1090 108 19 0 chr13 92842439 92842596 -27441716 + B2_Mm2 SINE B2 1 160 -35 6 1293 328 20 19 56 chr13 92842597 92842651 -27441661 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 6 1293 323 333 47 20 chr13 92843667 92843817 -27440495 + L3 LINE CR1 3970 4123 -366 6 1293 3008 157 130 13 chr13 92844157 92844680 -27439632 - RLTR31A_Mm LTR ERVK 0 584 1 6 1293 304 349 44 35 chr13 92845090 92845203 -27439109 - B3A SINE B2 -81 117 4 6 1293 292 355 11 11 chr13 92845636 92845730 -27438582 + PB1D10 SINE Alu 9 102 -15 6 1293 719 181 13 0 chr13 92845830 92845979 -27438333 + A-rich Low_complexity Low_complexity 4 154 0 6 1293 623 260 16 0 chr13 92846073 92846200 -27438112 - RSINE1 SINE B4 -33 132 4 6 1293 35 24 0 0 chr13 92846338 92846380 -27437932 + AT_rich Low_complexity Low_complexity 1 42 0 6 1293 762 252 18 75 chr13 92846486 92846523 -27437789 - B3 SINE B2 -2 214 185 6 1293 306 0 0 0 chr13 92846523 92846557 -27437755 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 1293 468 0 0 0 chr13 92846557 92846608 -27437704 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 1293 838 250 0 54 chr13 92846608 92846796 -27437516 - B3A SINE B2 -32 184 1 6 1293 180 267 0 0 chr13 92847066 92847126 -27437186 + GA-rich Low_complexity Low_complexity 3 62 0 7 1293 434 311 25 0 chr13 92847462 92847584 -27436728 - PB1 SINE Alu -1 126 2 7 1293 316 317 87 82 chr13 92848223 92848684 -27435628 + L1MEb LINE L1 130 592 -5478 7 1293 32776 75 9 11 chr13 92849006 92853989 -27430323 + L1Md_F2 LINE L1 613 5586 -297 7 1293 7501 73 33 7 chr13 92853990 92854947 -27429365 + L1Md_F2 LINE L1 5588 6569 -13 7 1293 6225 130 29 79 chr13 92855263 92855362 -27428950 - ORR1B1-int LTR MaLR -95 1868 1773 7 1293 811 0 0 20 chr13 92855362 92855463 -27428849 + (TAAAA)n Simple_repeat Simple_repeat 2 100 0 7 1293 6225 130 29 79 chr13 92855463 92856574 -27427738 - ORR1B1-int LTR MaLR -191 1772 719 7 1293 889 167 262 75 chr13 92856536 92856776 -27427536 - MT2B LTR ERVL -316 285 1 7 1293 2037 213 0 63 chr13 92856812 92857057 -27427255 - ORR1B1-int LTR MaLR -1323 640 401 7 1293 1154 107 0 12 chr13 92857057 92857218 -27427094 + L1_Mus1 LINE L1 6408 6566 -1 7 1293 2037 213 0 63 chr13 92857218 92857449 -27426863 - ORR1B1-int LTR MaLR -1563 400 194 7 1293 905 151 142 25 chr13 92857457 92857661 -27426651 - ORR1B1 LTR MaLR -164 230 3 7 1293 365 229 14 0 chr13 92857840 92857910 -27426402 + ID4 SINE ID 3 73 -10 8 1293 750 177 146 0 chr13 92859170 92859300 -27425012 - B1_Mur2 SINE Alu 0 149 1 8 1293 365 129 14 0 chr13 92859361 92859431 -27424881 + (TC)n Simple_repeat Simple_repeat 2 72 0 8 1293 216 216 0 0 chr13 92859443 92859494 -27424818 + CT-rich Low_complexity Low_complexity 1 51 0 8 1293 243 200 22 0 chr13 92859533 92859578 -27424734 - B1_Mus1 SINE Alu -92 56 11 8 1293 255 232 20 4 chr13 92859723 92859787 -27424525 + ID4 SINE ID 2 65 -87 8 1293 214 163 61 0 chr13 92859817 92859866 -27424446 + GA-rich Low_complexity Low_complexity 3 54 0 8 1293 196 340 52 0 chr13 92861368 92861465 -27422847 + MIR SINE MIR 104 205 -57 8 1293 1605 243 21 19 chr13 92861560 92861731 -27422581 + ORR1D1 LTR MaLR 1 173 -201 8 1293 294 73 0 0 chr13 92861731 92861772 -27422540 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 8 1293 1605 243 21 19 chr13 92861772 92861836 -27422476 + ORR1D1 LTR MaLR 174 238 -136 8 1293 351 0 0 0 chr13 92861836 92861875 -27422437 + (CCTG)n Simple_repeat Simple_repeat 4 42 0 9 1293 1605 243 21 19 chr13 92861875 92862011 -27422301 + ORR1D1 LTR MaLR 239 373 -1 8 1293 728 250 137 0 chr13 92862258 92862462 -27421850 + B4A SINE B4 53 284 -8 9 1293 216 97 0 0 chr13 92863322 92863353 -27420959 + (T)n Simple_repeat Simple_repeat 1 31 0 9 1293 1133 57 57 0 chr13 92863353 92863493 -27420819 - B1_Mus1 SINE Alu 0 148 1 9 1293 578 268 43 30 chr13 92864322 92864553 -27419759 + L1MB7 LINE L1 5631 5864 -320 9 1293 896 214 196 19 chr13 92864565 92864836 -27419476 + Lx5 LINE L1 6732 7050 0 9 1293 349 244 85 47 chr13 92864877 92865006 -27419306 + L1MB7 LINE L1 5875 6008 -170 9 1293 307 266 12 37 chr13 92866188 92866270 -27418042 - B1F SINE Alu -1 148 69 9 1293 226 286 0 0 chr13 92866273 92866322 -27417990 - PB1D10 SINE Alu -26 91 43 9 1293 228 289 39 13 chr13 92867375 92867452 -27416860 - B1F SINE Alu -7 142 64 9 1293 933 35 0 0 chr13 92867501 92867616 -27416696 - B1_Mm SINE Alu 0 147 33 9 1293 598 278 200 4 chr13 92870051 92870286 -27414026 - B4A SINE B4 -9 283 3 1 1293 285 391 71 4 chr13 92870582 92870808 -27413504 + L4 LINE RTE 1369 1609 -420 1 1293 351 0 0 0 chr13 92871074 92871113 -27413199 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1293 243 124 124 0 chr13 92871380 92871493 -27412819 + (CAGC)n Simple_repeat Simple_repeat 4 130 0 1 1293 3900 207 146 31 chr13 92871872 92873081 -27411231 + RMER1A Other Other 1 875 -155 1 1293 300 53 0 0 chr13 92873081 92873119 -27411193 + (TGG)n Simple_repeat Simple_repeat 1 38 0 1 1293 426 39 0 0 chr13 92873121 92873173 -27411139 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1293 3900 173 223 12 chr13 92873173 92873284 -27411028 + RMER1A Other Other 876 1025 -5 1 1293 394 212 75 0 chr13 92874805 92874885 -27409427 + PB1D7 SINE Alu 1 86 -34 1 1293 798 287 22 27 chr13 92874917 92875139 -27409173 + ID_B1 SINE B4 2 222 -2 1 1293 1063 230 202 6 chr13 92875403 92875746 -27408566 + MTD LTR MaLR 10 405 -14 1 1293 253 84 56 14 chr13 92876537 92876609 -27407703 + A-rich Low_complexity Low_complexity 2 76 0 1 1293 288 0 0 0 chr13 92879295 92879327 -27404985 + (CAA)n Simple_repeat Simple_repeat 1 32 0 1 1293 684 36 0 0 chr13 92879327 92879409 -27404903 + (GGA)n Simple_repeat Simple_repeat 3 85 0 1 1293 510 254 79 107 chr13 92880165 92880482 -27403830 - MER33 DNA MER1_type -11 313 6 1 1293 262 89 44 0 chr13 92881727 92881772 -27402540 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 1 1293 315 0 0 0 chr13 92881772 92881807 -27402505 + (GA)n Simple_repeat Simple_repeat 2 36 0 1 1293 889 67 42 6 chr13 92881808 92881973 -27402339 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 1 1293 186 43 0 0 chr13 92881974 92881997 -27402315 + (TATG)n Simple_repeat Simple_repeat 4 26 0 1 1293 250 272 20 23 chr13 92883970 92884053 -27400259 + ID4 SINE ID 10 91 -61 1 1293 308 304 130 65 chr13 92884318 92884687 -27399625 + L1ME4a LINE L1 5697 6089 -35 1 1293 212 211 0 0 chr13 92885077 92885115 -27399197 + PB1D10 SINE Alu 69 106 -11 1 1293 198 0 0 0 chr13 92885126 92885148 -27399164 + (CATA)n Simple_repeat Simple_repeat 2 23 0 1 1293 664 120 19 19 chr13 92885158 92885319 -27398993 + (TAGA)n Simple_repeat Simple_repeat 1 161 0 1 1293 212 0 36 0 chr13 92885457 92885485 -27398827 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1 1293 536 238 10 0 chr13 92886367 92886468 -27397844 + PB1D10 SINE Alu 5 106 -11 1 1293 315 0 0 0 chr13 92886468 92886503 -27397809 + (TAGG)n Simple_repeat Simple_repeat 1 35 0 1 1293 618 14 0 0 chr13 92886512 92886583 -27397729 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 1 1293 1297 71 0 0 chr13 92886583 92886753 -27397559 + B2_Mm1a SINE B2 15 184 -9 1 1293 307 178 29 7 chr13 92886756 92886892 -27397420 + (TAGA)n Simple_repeat Simple_repeat 3 141 0 1 1293 201 327 53 47 chr13 92887310 92887480 -27396832 + MIRb SINE MIR 48 218 -50 1 1293 1005 253 90 34 chr13 92887520 92887751 -27396561 + B4A SINE B4 2 247 -45 1 1293 2891 125 29 0 chr13 92887751 92888160 -27396152 + MTC LTR MaLR 1 421 0 1 1293 1005 253 90 34 chr13 92888160 92888194 -27396118 + B4A SINE B4 248 282 -10 1 1293 387 0 0 0 chr13 92888628 92888671 -27395641 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1293 1145 248 46 13 chr13 92888861 92889164 -27395148 + Lx7 LINE L1 6996 7308 -388 1 1293 282 73 0 0 chr13 92889182 92889223 -27395089 + (TTGG)n Simple_repeat Simple_repeat 3 43 0 1 1293 611 305 95 74 chr13 92889486 92890024 -27394288 + L1ME3A LINE L1 223 771 -5471 1 1293 341 282 122 0 chr13 92890024 92890155 -27394157 + HERVL40-int LTR ERVL 2701 2847 -2683 1 1293 320 251 30 14 chr13 92890222 92890318 -27393994 + PB1D10 SINE Alu 1 99 -21 1 1293 416 343 40 5 chr13 92890541 92890743 -27393569 + HERVL40-int LTR ERVL 3232 3440 -2090 1 1293 455 277 13 13 chr13 92891676 92891833 -27392479 + L1ME3A LINE L1 5105 5261 -885 1 1293 383 228 115 4 chr13 92891981 92892086 -27392226 - B1F SINE Alu -2 118 6 1 1293 637 297 97 40 chr13 92892218 92892762 -27391550 + L1ME3A LINE L1 5527 6101 -72 1 1293 21 0 0 0 chr13 92892837 92892858 -27391454 + AT_rich Low_complexity Low_complexity 1 21 0 1 1293 558 0 0 0 chr13 92893173 92893235 -27391077 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1293 613 242 8 0 chr13 92893337 92893465 -27390847 + B1F SINE Alu 3 131 -18 1 1293 369 0 0 0 chr13 92894438 92894479 -27389833 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1293 813 37 0 9 chr13 92894582 92894690 -27389622 - B1_Mm SINE Alu 0 147 41 1 1293 307 175 72 36 chr13 92894626 92894709 -27389603 - RLTR25B LTR ERVK -519 509 424 1 1293 532 232 0 0 chr13 92896358 92896457 -27387855 - PB1D7 SINE Alu 0 120 22 1 1293 1035 37 0 0 chr13 92896813 92896947 -27387365 + B1_Mus2 SINE Alu 14 147 0 1 1293 222 91 0 0 chr13 92896947 92896980 -27387332 + (GAAAA)n Simple_repeat Simple_repeat 3 35 0 1 1293 26 0 0 0 chr13 92897252 92897278 -27387034 + AT_rich Low_complexity Low_complexity 1 26 0 1 1293 276 53 0 0 chr13 92899774 92899812 -27384500 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1293 261 0 0 0 chr13 92900890 92900919 -27383393 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1 1293 304 324 11 23 chr13 92902033 92902207 -27382105 + (CA)n Simple_repeat Simple_repeat 1 172 0 1 1293 393 22 0 0 chr13 92902511 92902557 -27381755 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1293 348 24 0 0 chr13 92904031 92904072 -27380240 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1293 232 250 20 10 chr13 92904132 92904233 -27380079 + (TATG)n Simple_repeat Simple_repeat 2 103 0 1 1293 365 319 109 58 chr13 92904233 92904509 -27379803 - B4A SINE B4 -2 290 1 1 1293 2192 193 70 27 chr13 92905133 92905561 -27378751 + RLTR20C LTR ERVK 1 434 -100 1 1293 447 19 0 0 chr13 92905561 92905613 -27378699 + (TG)n Simple_repeat Simple_repeat 2 53 0 1 1293 2192 193 70 27 chr13 92905613 92905696 -27378616 + RLTR20C LTR ERVK 435 533 -1 1 1293 2362 214 8 14 chr13 92905738 92906241 -27378071 - RLTR16 LTR ERVK 0 505 6 1 1293 5217 149 79 27 chr13 92906247 92907019 -27377293 - MYSERV16_I-int LTR ERVK -2 2324 1522 1 1293 180 0 0 0 chr13 92907019 92907039 -27377273 + (CATATA)n Simple_repeat Simple_repeat 3 22 0 1 1293 5217 149 79 27 chr13 92907039 92907320 -27376992 - MYSERV16_I-int LTR ERVK -805 1521 1218 1 1293 514 230 9 113 chr13 92907319 92907540 -27376772 - MYSERV16_I-int LTR ERVK -1533 1309 1112 1 1293 393 205 22 43 chr13 92907774 92907866 -27376446 - MYSERV16_I-int LTR ERVK -1731 1111 1022 1 1293 272 306 51 70 chr13 92908031 92908189 -27376123 - MYSERV16_I-int LTR ERVK -2545 297 143 1 1293 289 274 61 61 chr13 92908188 92908320 -27375992 - RMER3D-int LTR ERVK -2483 359 228 1 1293 987 193 74 14 chr13 92908513 92908728 -27375584 - RLTR16 LTR ERVK 0 505 278 1 1293 183 206 40 14 chr13 92908958 92909032 -27375280 + GA-rich Low_complexity Low_complexity 3 78 0 1 1293 565 230 11 0 chr13 92909063 92909241 -27375071 + GA-rich Low_complexity Low_complexity 1 180 0 1 1293 311 290 53 46 chr13 92909880 92910032 -27374280 - LTR48 LTR ERV1 -634 153 1 1 1293 1207 172 8 21 chr13 92910248 92910486 -27373826 + ORR1A4 LTR MaLR 95 329 0 1 1293 2764 94 141 2 chr13 92910839 92911306 -27373006 - RLTR47_MM LTR ERV1 0 532 1 1 1293 1251 41 0 0 chr13 92911452 92911599 -27372713 - B1_Mm SINE Alu 0 147 1 1 1293 420 295 31 48 chr13 92911622 92911850 -27372462 - MURVY-int LTR ERV1 -93 7359 7136 1 1293 312 319 13 34 chr13 92912430 92912579 -27371733 - MuRRS4-int LTR ERV1 -2093 5685 5540 1 1293 2071 250 43 8 chr13 92912706 92913190 -27371122 - MuRRS4-int LTR ERV1 -1030 4033 3533 1 1293 1354 296 63 39 chr13 92913356 92914265 -27370047 - MuRRS4-int LTR ERV1 -5581 2197 1050 1 1293 476 316 54 57 chr13 92914573 92914894 -27369418 - MuRRS4-int LTR ERV1 -6906 872 514 1 1293 1663 94 321 0 chr13 92915434 92915827 -27368485 - RLTR47_MM LTR ERV1 -13 519 1 1 1293 2783 178 53 53 chr13 92916291 92916804 -27367508 + RMER20B LTR ERVK 10 529 -98 1 1293 7232 74 59 8 chr13 92916804 92917787 -27366525 - RLTR13D4 LTR ERVK 0 1033 1 1 1293 2783 178 53 53 chr13 92917787 92917891 -27366421 + RMER20B LTR ERVK 530 627 0 1 1293 603 206 38 8 chr13 92917984 92918116 -27366196 + B1_Mur2 SINE Alu 1 136 -13 1 1293 263 28 28 0 chr13 92918116 92918152 -27366160 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1 1293 272 280 173 16 chr13 92918943 92919186 -27365126 + L2 LINE L2 2396 2676 -743 1 1293 441 0 0 0 chr13 92919186 92919235 -27365077 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1293 396 0 0 0 chr13 92919235 92919278 -27365034 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1293 312 27 0 0 chr13 92921167 92921204 -27363108 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1293 585 0 0 0 chr13 92921204 92921268 -27363044 + (GA)n Simple_repeat Simple_repeat 1 65 0 1 1293 748 292 65 82 chr13 92922096 92922516 -27361796 + Lx9 LINE L1 6842 7356 -288 1 1293 378 0 0 0 chr13 92922547 92922589 -27361723 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1293 3867 78 6 10 chr13 92922805 92923321 -27360991 - L1Md_F2 LINE L1 0 6582 6069 1 1293 263 278 196 64 chr13 92923700 92923904 -27360408 + B4A SINE B4 33 263 -29 1 1293 462 79 0 0 chr13 92923924 92923987 -27360325 + (CA)n Simple_repeat Simple_repeat 1 63 0 1 1293 3697 56 13 2 chr13 92924039 92924502 -27359810 + Lx3_Mus LINE L1 6215 6682 -327 1 1293 1451 53 5 28 chr13 92924502 92924717 -27359595 + Lx3_Mus LINE L1 6800 7009 0 1 1293 1226 163 13 17 chr13 92924868 92925263 -27359049 + RLTR20A LTR ERVK 1 443 -91 1 1293 241 271 46 23 chr13 92925360 92925447 -27358865 + MLT1A1 LTR MaLR 304 392 -16 1 1293 1444 171 112 3 chr13 92925944 92926267 -27358045 - ORR1D1 LTR MaLR -13 361 4 1 1293 2657 160 56 2 chr13 92926262 92926762 -27357550 - ORR1D1-int LTR MaLR -2 1368 842 1 1293 316 225 14 0 chr13 92926768 92926839 -27357473 - ORR1D1 LTR MaLR -302 72 1 1 1293 1639 206 87 87 chr13 92926968 92927473 -27356839 - RMER19C LTR ERVK 0 611 107 1 1293 21 36 0 0 chr13 92927508 92927536 -27356776 + AT_rich Low_complexity Low_complexity 1 28 0 1 1293 360 209 0 0 chr13 92927542 92927628 -27356684 + (TATG)n Simple_repeat Simple_repeat 2 87 0 1 1293 846 238 90 0 chr13 92927629 92927818 -27356494 - B3 SINE B2 -10 206 1 1 1293 2864 288 110 34 chr13 92928756 92928917 -27355395 + Lx8 LINE L1 6234 6401 -1072 1 1293 306 0 0 0 chr13 92928917 92928951 -27355361 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1293 2864 288 110 34 chr13 92928951 92929939 -27354373 + Lx8 LINE L1 6402 7470 -3 1 161 2852 30 42 0 chr13 92929988 92930320 -27353992 - ORR1A1 LTR MaLR 0 346 1 1 1294 2957 62 48 7 chr13 92930320 92930755 -27353557 - ORR1A1-int LTR MaLR 0 1792 1340 1 1294 1304 41 6 0 chr13 92930786 92930956 -27353356 - ORR1A1 LTR MaLR 0 346 176 1 1294 2392 76 6 3 chr13 92930942 92931285 -27353027 + MTA_Mm LTR MaLR 53 396 0 1 1294 204 97 0 0 chr13 92931840 92931871 -27352441 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1 1294 712 304 47 36 chr13 92932772 92933101 -27351211 + MLT1A1 LTR MaLR 5 405 -3 1 1294 210 171 0 0 chr13 92933255 92933296 -27351016 + T-rich Low_complexity Low_complexity 1 41 0 1 1294 332 283 25 58 chr13 92933296 92933416 -27350896 - PB1D10 SINE Alu 0 117 2 2 1294 204 83 56 0 chr13 92933446 92933482 -27350830 + (TCTG)n Simple_repeat Simple_repeat 4 41 0 2 1294 754 301 15 0 chr13 92933538 92933739 -27350573 - B4A SINE B4 -10 282 79 2 1294 1184 249 125 8 chr13 92933739 92934100 -27350212 + MTD LTR MaLR 3 405 -14 2 1294 388 182 2 2 chr13 92934114 92934192 -27350120 - B4A SINE B4 -83 82 4 2 1294 1066 108 0 0 chr13 92934770 92934909 -27349403 - B1_Mus1 SINE Alu -9 139 1 2 1294 27 0 0 0 chr13 92934978 92935005 -27349307 + AT_rich Low_complexity Low_complexity 1 27 0 2 1294 22 0 0 0 chr13 92935045 92935067 -27349245 + AT_rich Low_complexity Low_complexity 1 22 0 2 1294 32516 76 6 2 chr13 92935167 92940342 -27343970 + L1Md_F2 LINE L1 392 5585 -298 2 1294 7503 63 25 12 chr13 92940343 92941325 -27342987 + L1Md_F2 LINE L1 5587 6581 -1 2 1294 2675 193 102 68 chr13 92942242 92943113 -27341199 - RLTR13D6 LTR ERVK -1 901 1 2 1294 744 253 174 46 chr13 92943117 92943616 -27340696 - L1MC LINE L1 -1082 5064 4493 2 1294 2347 82 3 71 chr13 92943616 92943969 -27340343 - ORR1A4 LTR MaLR 0 329 1 2 1294 744 253 174 46 chr13 92943969 92944008 -27340304 - L1MC LINE L1 -1654 4492 4457 2 1294 369 255 21 1 chr13 92944436 92944558 -27339754 + L1MA5 LINE L1 6157 6289 -11 2 1294 279 277 53 0 chr13 92944569 92944663 -27339649 + L1MA6 LINE L1 6176 6274 -26 2 1294 238 294 25 84 chr13 92944663 92944782 -27339530 + MT2B2 LTR ERVL 152 263 -321 2 1294 521 295 7 21 chr13 92944677 92944819 -27339493 + ID_B1 SINE B4 84 223 -1 2 1294 258 320 13 0 chr13 92944883 92944961 -27339351 - ID4 SINE ID -1 82 4 2 1294 250 312 23 15 chr13 92944963 92945093 -27339219 - L1M5 LINE L1 -2249 3897 3767 2 1294 1740 228 55 20 chr13 92945097 92945589 -27338723 - RLTR11A2 LTR ERVK 0 527 19 2 1294 207 0 0 0 chr13 92946267 92946290 -27338022 + (TTAG)n Simple_repeat Simple_repeat 1 23 0 2 1294 434 259 83 0 chr13 92946306 92946414 -27337898 - PB1D10 SINE Alu 0 117 1 2 1294 256 270 16 0 chr13 92946843 92946947 -27337365 + CT-rich Low_complexity Low_complexity 1 105 0 2 1294 817 280 84 8 chr13 92947846 92948109 -27336203 - B4A SINE B4 -2 290 8 2 1294 17003 163 24 78 chr13 92948583 92950948 -27333364 - L1_Mur1 LINE L1 -1123 4754 2243 2 1294 1534 134 124 0 chr13 92950948 92951239 -27333073 - IAPEY3_LTR LTR ERVK -5 327 1 2 1294 17003 163 24 78 chr13 92951239 92953221 -27331091 - L1_Mur1 LINE L1 -1123 2242 135 2 1294 375 78 0 0 chr13 92953412 92953463 -27330849 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1294 337 333 47 33 chr13 92953530 92953744 -27330568 - MamRep1161 DNA TcMar -690 267 51 2 1294 965 127 29 117 chr13 92954214 92954419 -27329893 - B2_Mm2 SINE B2 -6 189 3 2 1294 24 67 0 0 chr13 92954711 92954756 -27329556 + AT_rich Low_complexity Low_complexity 1 45 0 2 1294 2384 212 26 83 chr13 92955129 92955576 -27328736 + RMER19C LTR ERVK 1 426 -185 2 1294 207 0 0 0 chr13 92955576 92955599 -27328713 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1294 2384 212 26 83 chr13 92955599 92955799 -27328513 + RMER19C LTR ERVK 427 611 0 2 1294 303 96 0 0 chr13 92956553 92956605 -27327707 + (CCAA)n Simple_repeat Simple_repeat 3 54 0 2 1294 471 220 90 0 chr13 92956883 92956983 -27327329 + PB1D10 SINE Alu 2 110 -7 2 1294 1678 148 36 129 chr13 92957134 92957545 -27326767 - ORR1D1 LTR MaLR -1 373 1 2 1294 263 401 32 0 chr13 92957607 92957764 -27326548 - MLT1I LTR MaLR -150 261 100 2 1294 1172 81 0 0 chr13 92958634 92958782 -27325530 + B1_Mus1 SINE Alu 1 148 0 2 1294 746 185 121 0 chr13 92959093 92959266 -27325046 - B3 SINE B2 -21 195 2 2 1294 327 291 62 11 chr13 92959347 92959545 -27324767 - L1MD1 LINE L1 -1997 6396 6189 2 1294 853 270 52 41 chr13 92959545 92959815 -27324497 + B4A SINE B4 1 273 -19 2 1294 632 13 13 0 chr13 92959820 92959897 -27324415 + (TC)n Simple_repeat Simple_repeat 1 78 0 2 1294 608 216 0 0 chr13 92959932 92960048 -27324264 - B1F2 SINE Alu -6 143 28 2 1294 331 323 91 48 chr13 92960068 92960206 -27324106 - L1MD1 LINE L1 -817 5727 5593 2 1294 3878 50 12 10 chr13 92960206 92960694 -27323618 - L1Md_F3 LINE L1 0 6584 6096 2 1294 342 323 90 47 chr13 92960694 92961020 -27323292 - L1MD1 LINE L1 -952 5592 5243 2 1294 449 296 23 0 chr13 92961025 92961157 -27323155 + B1F1 SINE Alu 15 149 0 2 1294 428 282 137 31 chr13 92961183 92961541 -27322771 - L1MD1 LINE L1 -1300 5244 4849 2 1294 1502 180 20 93 chr13 92961754 92961927 -27322385 + ORR1C1 LTR MaLR 2 176 -202 2 1294 1237 17 0 43 chr13 92961927 92962115 -27322197 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 1294 1502 180 20 93 chr13 92962115 92962172 -27322140 + ORR1C1 LTR MaLR 177 214 -164 2 1294 1077 17 0 62 chr13 92962172 92962364 -27321948 + (TC)n Simple_repeat Simple_repeat 1 180 0 2 1294 1502 180 20 93 chr13 92962364 92962530 -27321782 + ORR1C1 LTR MaLR 215 370 -8 2 1294 518 296 44 0 chr13 92962536 92962695 -27321617 - L1MD1 LINE L1 -1925 4619 4454 2 1294 636 194 0 15 chr13 92962715 92962845 -27321467 + B1_Mur3 SINE Alu 6 133 -16 2 1294 2005 137 78 0 chr13 92962845 92963203 -27321109 + ORR1B1 LTR MaLR 1 386 -8 2 1294 237 33 0 0 chr13 92963243 92963273 -27321039 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2 1294 293 274 82 86 chr13 92963288 92963567 -27320745 - L1MD1 LINE L1 -2139 4405 4128 2 1294 237 146 0 0 chr13 92963702 92963750 -27320562 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 2 1294 1237 34 7 0 chr13 92963755 92963901 -27320411 - B1_Mm SINE Alu 0 147 1 2 1294 277 319 90 19 chr13 92963904 92964160 -27320152 - L1MD1 LINE L1 -2729 3815 3542 2 1294 709 304 99 8 chr13 92964224 92964476 -27319836 - B4A SINE B4 -15 277 3 2 1294 959 90 36 12 chr13 92964643 92964811 -27319501 + (TATG)n Simple_repeat Simple_repeat 3 174 0 2 1294 277 279 172 81 chr13 92964985 92965403 -27318909 - L1MD1 LINE L1 -3403 3141 2686 2 1294 662 322 63 10 chr13 92965446 92965902 -27318410 - L1MD1 LINE L1 -5403 1237 751 2 1294 359 307 0 0 chr13 92966510 92966598 -27317714 - PB1D10 SINE Alu -12 105 18 2 1294 2457 86 6 6 chr13 92967748 92968075 -27316237 - ORR1A2 LTR MaLR 0 327 1 2 1294 1313 129 8 41 chr13 92968604 92968847 -27315465 - Lx LINE L1 0 6654 6420 2 1294 250 289 20 20 chr13 92969125 92969224 -27315088 + HAL1b LINE L1 1180 1278 -731 2 1294 1320 242 81 17 chr13 92969690 92970160 -27314152 + Lx7 LINE L1 4822 5321 -559 2 1294 2475 196 18 8 chr13 92970174 92970674 -27313638 + RLTR16 LTR ERVK 1 505 0 2 1294 1524 237 72 92 chr13 92970675 92971483 -27312829 + Lx7 LINE L1 5331 6125 -1571 2 1294 709 156 57 0 chr13 92971503 92971625 -27312687 + B1_Mus1 SINE Alu 1 129 -19 2 1294 447 308 86 20 chr13 92971628 92971651 -27312661 + Lx7 LINE L1 6063 6083 -1613 2 1294 1072 81 11 17 chr13 92971651 92971828 -27312484 + (GGA)n Simple_repeat Simple_repeat 3 178 0 2 1294 650 251 66 25 chr13 92971828 92972054 -27312258 + Lx7 LINE L1 6084 6330 -1143 2 1294 1893 181 55 10 chr13 92972064 92972449 -27311863 - MTD LTR MaLR -17 402 1 2 1294 447 221 287 0 chr13 92972450 92972586 -27311726 + Lx7 LINE L1 6327 6501 -972 2 1294 279 0 0 0 chr13 92973019 92973050 -27311262 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1294 4367 133 19 4 chr13 92973365 92974046 -27310266 - Lx2 LINE L1 0 6997 6307 2 1294 313 316 138 29 chr13 92975440 92975818 -27308494 + Tigger10 DNA Tigger 927 1345 -498 2 1294 278 234 0 15 chr13 92975884 92975949 -27308363 + L1MC2 LINE L1 6268 6331 -13 2 1294 890 239 34 0 chr13 92975949 92976158 -27308154 + B3 SINE B2 1 216 0 2 1294 216 97 0 0 chr13 92976184 92976215 -27308097 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1294 1094 240 106 25 chr13 92976217 92976487 -27307825 + L1MC1 LINE L1 4965 5251 -895 2 1294 1715 158 122 46 chr13 92976487 92976838 -27307474 + ORR1C1 LTR MaLR 1 378 0 2 1294 2299 255 89 65 chr13 92976838 92977902 -27306410 + L1MC1 LINE L1 5252 6332 -1 2 1294 824 145 7 0 chr13 92978050 92978195 -27306117 + (TAGA)n Simple_repeat Simple_repeat 3 148 0 2 1294 435 354 108 11 chr13 92978390 92978667 -27305645 + Lx8 LINE L1 6973 7276 -197 2 1294 1632 175 48 7 chr13 92978667 92978977 -27305335 + Lx7 LINE L1 6803 7125 -571 2 1294 405 0 0 0 chr13 92979306 92979351 -27304961 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1294 684 0 0 0 chr13 92979351 92979426 -27304886 + (GA)n Simple_repeat Simple_repeat 1 76 0 2 1294 227 244 0 13 chr13 92979500 92979579 -27304733 + GA-rich Low_complexity Low_complexity 4 81 0 2 1294 21 71 0 0 chr13 92980583 92980625 -27303687 + AT_rich Low_complexity Low_complexity 1 42 0 2 1294 606 236 101 47 chr13 92980791 92981049 -27303263 + L1MB8 LINE L1 5718 5989 -189 2 1294 669 200 92 0 chr13 92981635 92981765 -27302547 + B1_Mur1 SINE Alu 1 142 -7 2 1294 1189 164 10 24 chr13 92982959 92983165 -27301147 - B3 SINE B2 -9 207 5 2 1294 597 154 146 0 chr13 92983366 92983489 -27300823 - B1_Mur2 SINE Alu 0 149 9 2 1294 460 242 82 32 chr13 92983867 92984025 -27300287 - B3 SINE B2 -3 213 48 2 1294 216 86 0 0 chr13 92984048 92984083 -27300229 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1294 724 143 9 0 chr13 92984085 92984190 -27300122 - PB1D9 SINE Alu -13 107 2 2 1294 429 206 11 21 chr13 92984738 92984832 -27299480 - B3A SINE B2 -105 93 1 2 1294 378 245 120 19 chr13 92984919 92985027 -27299285 - RSINE1 SINE B4 -45 120 2 2 1294 545 302 172 37 chr13 92986024 92986268 -27298044 + MLT1F2 LTR MaLR 67 343 -217 2 1294 216 0 0 0 chr13 92986356 92986380 -27297932 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 1294 279 0 0 0 chr13 92986380 92986410 -27297902 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1294 243 0 0 0 chr13 92987514 92987541 -27296771 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1294 345 240 40 10 chr13 92987602 92987703 -27296609 - PB1 SINE Alu -3 124 21 2 1294 321 266 218 0 chr13 92988290 92988414 -27295898 - RSINE1 SINE B4 -14 151 1 2 1294 423 262 37 0 chr13 92988525 92988632 -27295680 - ID_B1 SINE B4 -14 210 100 2 1294 243 279 15 0 chr13 92989014 92989082 -27295230 + ID4_ SINE ID 10 78 -5 2 1294 180 0 0 0 chr13 92990201 92990221 -27294091 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1294 180 115 0 0 chr13 92990486 92990512 -27293800 + MIR SINE MIR 93 118 -90 2 1294 299 260 14 0 chr13 92991280 92991353 -27292959 - ID4 SINE ID -7 76 3 2 1294 1049 62 31 0 chr13 92991658 92991819 -27292493 + B2_Mm2 SINE B2 30 195 0 2 1294 320 234 53 18 chr13 92991843 92991956 -27292356 + L1MC LINE L1 4470 4586 -1560 2 1294 293 305 55 24 chr13 92992037 92992250 -27292062 + MLT1F LTR MaLR 191 415 -145 2 1294 409 296 20 20 chr13 92992717 92992865 -27291447 + (CA)n Simple_repeat Simple_repeat 1 148 0 3 1294 27 49 0 0 chr13 92993544 92993585 -27290727 + AT_rich Low_complexity Low_complexity 1 41 0 3 1294 258 277 32 48 chr13 92996510 92996635 -27287677 + B1F1 SINE Alu 25 147 -2 3 1294 384 40 0 0 chr13 92996707 92996757 -27287555 + (CA)n Simple_repeat Simple_repeat 2 51 0 3 1294 21 0 0 0 chr13 92997281 92997302 -27287010 + AT_rich Low_complexity Low_complexity 1 21 0 3 1294 631 247 7 7 chr13 92998917 92999064 -27285248 - B1_Mur2 SINE Alu -1 148 2 3 1294 245 254 134 0 chr13 92999314 92999381 -27284931 + ID_B1 SINE B4 79 154 -70 3 1294 220 206 62 31 chr13 92999438 92999503 -27284809 + B4A SINE B4 10 76 -216 3 1294 287 299 116 41 chr13 93000423 93000716 -27283596 + L1MA7 LINE L1 5967 6281 -10 1 1294 380 214 124 0 chr13 93000733 93000822 -27283490 + PB1D10 SINE Alu 2 101 -16 2 1294 315 0 0 0 chr13 93000887 93000922 -27283390 + (TTA)n Simple_repeat Simple_repeat 3 37 0 3 1294 803 270 201 51 chr13 93001000 93001642 -27282670 + L1MC1 LINE L1 5596 6333 0 4 1294 495 268 37 52 chr13 93004277 93004411 -27279901 + B4 SINE B4 149 280 -12 5 1294 442 301 38 0 chr13 93005773 93005906 -27278406 - B1F SINE Alu -11 138 1 6 1294 265 219 12 47 chr13 93006009 93006095 -27278217 - MLT1A1 LTR MaLR -4 404 322 7 1294 252 59 0 0 chr13 93006412 93006446 -27277866 + (CA)n Simple_repeat Simple_repeat 1 34 0 8 1294 319 286 126 34 chr13 93006493 93006699 -27277613 + L1M5 LINE L1 5487 5711 -462 9 1294 229 260 0 0 chr13 93007105 93007155 -27277157 + L1M5 LINE L1 5714 5763 -401 9 1294 910 275 115 42 chr13 93007441 93007919 -27276393 + L1MA6 LINE L1 5641 6153 -147 1 1294 1700 129 35 65 chr13 93008590 93008929 -27275383 + ORR1A4 LTR MaLR 1 329 0 1 1294 528 229 116 17 chr13 93009071 93009244 -27275068 - MER53 DNA hAT 0 193 4 1 1294 236 57 0 0 chr13 93010386 93010421 -27273891 + B1_Mus2 SINE Alu 109 143 -4 1 1294 198 0 0 0 chr13 93010422 93010444 -27273868 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 1 1294 189 0 0 0 chr13 93010739 93010760 -27273552 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1 1294 918 227 64 0 chr13 93011245 93011301 -27273011 - B3 SINE B2 0 216 159 1 1294 462 36 0 0 chr13 93011301 93011357 -27272955 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1294 918 227 64 0 chr13 93011357 93011503 -27272809 - B3 SINE B2 -58 158 2 1 1294 201 195 0 24 chr13 93011826 93011868 -27272444 + CT-rich Low_complexity Low_complexity 2 42 0 1 1294 449 265 22 25 chr13 93011890 93012164 -27272148 - MLT1A0 LTR MaLR -46 328 9 1 1294 1078 218 111 4 chr13 93013388 93013650 -27270662 + B4A SINE B4 2 291 -1 2 1294 180 0 0 0 chr13 93013743 93013763 -27270549 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 2 1294 187 354 12 12 chr13 93013854 93013937 -27270375 - MIR SINE MIR -114 148 66 2 1294 200 295 100 25 chr13 93014503 93014583 -27269729 - MIR SINE MIR -60 148 63 2 1294 703 260 11 6 chr13 93014866 93015040 -27269272 + B3A SINE B2 8 182 -16 2 1294 429 235 176 0 chr13 93015170 93015323 -27268989 + B3A SINE B2 1 180 -18 2 1294 414 0 0 0 chr13 93015419 93015465 -27268847 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1294 2949 73 36 5 chr13 93016115 93016499 -27267813 - MTA_Mm LTR MaLR 0 396 1 2 1294 262 333 15 38 chr13 93016522 93016653 -27267659 - Charlie17a DNA MER1_type -89 130 3 2 1294 24 32 0 0 chr13 93017901 93017932 -27266380 + AT_rich Low_complexity Low_complexity 1 31 0 2 1294 370 327 88 7 chr13 93018296 93018520 -27265792 + MLT1A0 LTR MaLR 125 367 -7 3 1294 1065 50 43 14 chr13 93019506 93019647 -27264665 + B1_Mm SINE Alu 3 147 0 3 1294 332 221 58 0 chr13 93019956 93020042 -27264270 + B1_Mur3 SINE Alu 1 91 -58 3 1294 346 215 78 28 chr13 93020940 93021075 -27263237 - B3 SINE B2 -18 177 28 3 1294 25 95 0 0 chr13 93021316 93021390 -27262922 + AT_rich Low_complexity Low_complexity 1 74 0 3 1294 767 243 180 37 chr13 93021600 93022062 -27262250 - Looper DNA PiggyBac -272 1286 759 3 1294 225 83 0 0 chr13 93022806 93022842 -27261470 + (TCTG)n Simple_repeat Simple_repeat 4 39 0 3 1294 1507 192 110 9 chr13 93023172 93023518 -27260794 + MTD LTR MaLR 25 405 -14 3 1294 556 227 7 7 chr13 93023580 93023731 -27260581 + (TATATG)n Simple_repeat Simple_repeat 2 152 0 3 1294 228 135 0 0 chr13 93025066 93025103 -27259209 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1294 201 39 0 0 chr13 93027192 93027218 -27257094 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 4 1294 292 278 52 0 chr13 93027532 93027629 -27256683 + ID_B1 SINE B4 84 185 -39 4 1294 24 32 0 0 chr13 93028286 93028317 -27255995 + AT_rich Low_complexity Low_complexity 1 31 0 4 1294 504 288 8 8 chr13 93029776 93029909 -27254403 + ID_B1 SINE B4 90 222 -2 4 1294 7761 66 19 7 chr13 93031917 93032566 -27251746 + L1_Mus3 LINE L1 5617 6281 -357 4 1294 3002 70 39 3 chr13 93032566 93032952 -27251360 + MTB LTR MaLR 1 400 0 4 1294 7761 66 19 7 chr13 93032952 93033305 -27251007 + L1_Mus3 LINE L1 6282 6631 -7 4 1294 319 175 16 0 chr13 93033402 93033465 -27250847 - B3 SINE B2 0 216 153 4 1294 343 97 0 16 chr13 93034908 93034971 -27249341 - Lx2 LINE L1 0 6997 6936 4 1294 453 36 0 0 chr13 93036192 93036247 -27248065 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 1294 593 250 14 87 chr13 93036291 93036510 -27247802 - B4A SINE B4 -81 211 9 4 1294 1246 47 0 0 chr13 93036732 93036880 -27247432 - B1_Mus1 SINE Alu 0 148 1 5 1294 353 298 53 0 chr13 93037200 93037294 -27247018 - Lx8 LINE L1 -413 7060 6962 5 1294 827 118 0 0 chr13 93037568 93037687 -27246625 + B3 SINE B2 2 120 -96 5 1294 22 35 0 0 chr13 93037713 93037742 -27246570 + AT_rich Low_complexity Low_complexity 1 29 0 5 1294 27628 22 1 0 chr13 93038423 93041612 -27242700 - L1_Mm LINE L1 -386 5497 2307 5 1294 8182 54 0 0 chr13 93041631 93042682 -27241630 + L1Md_T LINE L1 5587 6582 0 5 1294 189 74 0 0 chr13 93042729 93042756 -27241556 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1294 289 299 71 20 chr13 93042904 93043003 -27241309 - ID_B1 SINE B4 -1 223 120 5 1294 261 234 37 16 chr13 93044139 93044215 -27240097 + MIR SINE MIR 10 92 -176 5 1294 401 277 26 35 chr13 93044910 93045026 -27239286 + B1F SINE Alu 1 115 -34 5 1294 206 32 32 0 chr13 93046535 93046566 -27237746 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 6 1294 1159 61 0 0 chr13 93046576 93046724 -27237588 + B1_Mus1 SINE Alu 1 148 0 6 1294 287 123 0 34 chr13 93047239 93047298 -27237014 + A-rich Low_complexity Low_complexity 2 58 0 6 1294 12301 62 0 1 chr13 93047708 93049245 -27235067 + L1Md_F2 LINE L1 4051 5586 -297 6 1294 7942 60 6 5 chr13 93049245 93050240 -27234072 + L1Md_F2 LINE L1 5587 6582 0 6 1294 4257 39 2 10 chr13 93050473 93050989 -27233323 - L1Md_F2 LINE L1 0 6582 6071 6 1294 1233 48 0 0 chr13 93051001 93051147 -27233165 - B1_Mm SINE Alu 0 147 2 6 1294 2629 175 103 12 chr13 93051222 93052198 -27232114 + L1_Mur3 LINE L1 671 1728 -4152 6 1294 3305 50 0 8 chr13 93052198 93052597 -27231715 - MTA_Mm LTR MaLR 0 396 1 6 1294 7546 73 23 69 chr13 93052597 93053749 -27230563 - MTA_Mm-int LTR MaLR 0 1098 1 6 1294 3193 59 10 5 chr13 93053749 93054143 -27230169 - MTA_Mm LTR MaLR 0 396 1 6 1294 2629 172 77 18 chr13 93054143 93054246 -27230066 + L1_Mur3 LINE L1 1729 1856 -4024 6 1294 3727 105 80 32 chr13 93054248 93054978 -27229334 + RMER17A LTR ERVK 2 751 0 6 1294 945 205 37 68 chr13 93054978 93055467 -27228845 + L1_Mur3 LINE L1 1852 2274 -3606 6 1294 26 0 0 0 chr13 93055484 93055510 -27228802 + AT_rich Low_complexity Low_complexity 1 26 0 6 1294 346 359 17 50 chr13 93056173 93056211 -27228101 + MLT1J2 LTR MaLR 47 77 -371 7 1294 2554 187 111 47 chr13 93056211 93056790 -27227522 - RLTR18 LTR ERVK 0 616 1 7 1294 346 359 17 50 chr13 93056790 93056930 -27227382 + MLT1J2 LTR MaLR 78 219 -229 7 1294 391 291 0 41 chr13 93057522 93057644 -27226668 + B3 SINE B2 1 117 -99 7 1294 290 269 90 0 chr13 93057639 93057717 -27226595 - RLTR18B LTR ERVK -4 508 424 7 1294 216 0 0 0 chr13 93057881 93057905 -27226407 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1294 1639 33 5 5 chr13 93058599 93058811 -27225501 - MTA_Mm LTR MaLR 0 396 185 7 1294 544 119 0 0 chr13 93058796 93058880 -27225432 + B1_Mm SINE Alu 57 140 -7 7 1294 1037 215 112 48 chr13 93059453 93059809 -27224503 - MTE2a LTR MaLR 0 379 1 7 1294 473 238 88 92 chr13 93060275 93060425 -27223887 + B3 SINE B2 5 160 -56 7 1294 219 36 0 0 chr13 93060425 93060453 -27223859 + (CA)n Simple_repeat Simple_repeat 2 29 0 7 1294 308 268 61 128 chr13 93060453 93060496 -27223816 + B2_Mm2 SINE B2 149 181 -14 7 1295 21 0 0 0 chr13 93061895 93061916 -27222396 + AT_rich Low_complexity Low_complexity 1 21 0 8 1295 756 62 257 0 chr13 93063172 93063285 -27221027 + B1_Mus1 SINE Alu 3 144 -4 8 1295 675 122 0 0 chr13 93063286 93063417 -27220895 + (GA)n Simple_repeat Simple_repeat 2 132 0 8 1295 352 242 0 6 chr13 93063856 93063944 -27220368 + L1M2 LINE L1 5544 5627 -615 8 1295 886 318 142 45 chr13 93063954 93064622 -27219690 + Lx8 LINE L1 5630 6388 -1085 8 1295 200 35 35 0 chr13 93064622 93064651 -27219661 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 8 1295 886 318 142 45 chr13 93064651 93064963 -27219349 + Lx8 LINE L1 6389 6704 -769 8 1295 1294 216 171 0 chr13 93064972 93065323 -27218989 - MTD LTR MaLR -8 411 1 8 1295 3139 46 15 3 chr13 93065754 93066145 -27218167 - MTA_Mm LTR MaLR 0 396 1 8 1295 333 282 8 0 chr13 93066396 93066513 -27217799 + MLT1C LTR MaLR 196 313 -154 8 1295 1720 174 81 3 chr13 93066629 93066987 -27217325 + ORR1B1 LTR MaLR 1 386 -8 8 1295 240 35 0 0 chr13 93067438 93067467 -27216845 + (TTG)n Simple_repeat Simple_repeat 2 30 0 9 1295 1145 63 0 7 chr13 93067467 93067604 -27216708 - B1_Mus2 SINE Alu -10 137 1 9 1295 26 0 0 0 chr13 93067699 93067725 -27216587 + AT_rich Low_complexity Low_complexity 1 26 0 9 1295 181 343 26 71 chr13 93067783 93067896 -27216416 - L2c LINE L2 -257 3130 3023 9 1295 551 309 41 15 chr13 93068326 93068523 -27215789 - B3 SINE B2 0 216 15 9 1295 902 145 28 0 chr13 93069893 93070038 -27214274 + B1_Mur4 SINE Alu 2 150 0 9 1295 246 333 38 38 chr13 93071159 93071265 -27213047 - PB1 SINE Alu -21 106 1 9 1295 526 250 59 7 chr13 93072127 93072280 -27212032 - MLT1A0 LTR MaLR -4 361 201 9 1295 412 271 8 17 chr13 93074274 93074394 -27209918 + B1_Mus2 SINE Alu 9 127 -20 9 1295 572 184 69 28 chr13 93074394 93074539 -27209773 + L1_Mur3 LINE L1 5399 5549 -331 9 1295 299 274 102 8 chr13 93074551 93074711 -27209601 - L1M4 LINE L1 -1554 4592 4412 1 1295 305 64 0 41 chr13 93077388 93077437 -27206875 + (TTTC)n Simple_repeat Simple_repeat 4 50 0 1 1295 587 186 16 33 chr13 93077437 93077559 -27206753 - PB1D9 SINE Alu 0 120 1 1 1295 420 313 66 51 chr13 93077669 93078019 -27206293 + MTEb LTR MaLR 1 355 -24 1 1295 418 265 121 64 chr13 93078925 93079082 -27205230 - B4A SINE B4 -14 278 113 1 1295 660 162 44 0 chr13 93079233 93079369 -27204943 + ORR1C1 LTR MaLR 1 142 -236 1 1295 26 30 0 0 chr13 93079550 93079583 -27204729 + AT_rich Low_complexity Low_complexity 1 33 0 1 1295 1202 168 23 5 chr13 93080645 93080866 -27203446 + URR1B DNA MER1_type 1 225 0 1 1295 293 310 0 49 chr13 93082236 93082358 -27201954 - PB1D10 SINE Alu -1 116 1 1 1295 1226 61 0 0 chr13 93083721 93083869 -27200443 - B1_Mus1 SINE Alu 0 148 1 1 1295 259 234 64 52 chr13 93084221 93084369 -27199943 + Lx5 LINE L1 6919 7032 -18 1 1295 951 261 24 12 chr13 93087273 93087521 -27196791 - B4 SINE B4 -4 288 38 1 1295 2271 114 9 0 chr13 93087949 93088273 -27196039 + ORR1A2 LTR MaLR 1 327 0 1 1295 203 0 0 36 chr13 93088529 93088557 -27195755 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1 1295 445 256 0 8 chr13 93088557 93088675 -27195637 - B1F1 SINE Alu -11 138 22 1 1295 381 131 0 0 chr13 93088879 93088940 -27195372 + (GGA)n Simple_repeat Simple_repeat 3 63 0 1 1295 211 222 0 0 chr13 93089326 93089371 -27194941 + MER5A DNA MER1_type 144 188 -1 1 1295 315 309 98 78 chr13 93089871 93090127 -27194185 + L1MC5 LINE L1 6644 6904 -1057 1 1295 189 0 0 0 chr13 93090528 93090549 -27193763 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1 1295 884 310 97 57 chr13 93090871 93091665 -27192647 + L1MA9 LINE L1 5268 6093 -219 1 1295 347 236 150 0 chr13 93091679 93091806 -27192506 + L1MA9 LINE L1 6167 6312 0 1 1295 235 346 12 0 chr13 93092176 93092257 -27192055 - Tigger7 DNA MER2_type -1 2490 2409 1 1295 226 259 74 0 chr13 93092257 93092338 -27191974 + L1MD LINE L1 5593 5679 -2316 1 1295 379 184 0 0 chr13 93092489 93092565 -27191747 + L1MA7 LINE L1 5145 5220 -923 1 1295 1017 248 149 9 chr13 93092589 93092939 -27191373 - MTD LTR MaLR -14 405 7 1 1295 1043 301 114 30 chr13 93092946 93093573 -27190739 + L1MA7 LINE L1 5198 5913 -378 1 1295 354 248 66 9 chr13 93093868 93093974 -27190338 + L1MB8 LINE L1 5881 5992 -186 1 1295 564 179 263 11 chr13 93094399 93094574 -27189738 + URR1A DNA MER1_type 1 219 -7 1 1295 733 93 24 28 chr13 93094904 93095080 -27189232 - L1Md_F2 LINE L1 -596 6058 5885 1 1295 1562 57 0 0 chr13 93095083 93095275 -27189037 + L1_Mm LINE L1 4778 4969 -914 1 1295 227 20 57 57 chr13 93095893 93095946 -27188366 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 1 1295 294 50 0 0 chr13 93096362 93096402 -27187910 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1295 317 174 14 0 chr13 93096904 93096973 -27187339 + GA-rich Low_complexity Low_complexity 1 70 0 1 1295 309 51 0 0 chr13 93097544 93097583 -27186729 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1295 1171 51 0 0 chr13 93097583 93097720 -27186592 - B1_Mm SINE Alu -10 137 1 1 1295 653 278 93 46 chr13 93097754 93098078 -27186234 + L1ME3 LINE L1 5603 5941 -221 1 1295 746 144 15 36 chr13 93098505 93098642 -27185670 + B1_Mur4 SINE Alu 11 144 -6 1 1295 25 31 0 0 chr13 93098642 93098674 -27185638 + AT_rich Low_complexity Low_complexity 1 32 0 1 1295 231 296 151 55 chr13 93099196 93099414 -27184898 + MLT1B LTR MaLR 83 321 -69 1 1295 641 252 99 47 chr13 93100006 93100177 -27184135 + B3A SINE B2 1 180 -18 1 1295 183 42 0 0 chr13 93100213 93100237 -27184075 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1295 463 291 85 62 chr13 93100376 93100552 -27183760 - B3A SINE B2 -36 180 1 1 1295 189 0 0 0 chr13 93101895 93101916 -27182396 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1 1295 22 0 0 0 chr13 93103985 93104007 -27180305 + GC_rich Low_complexity Low_complexity 1 22 0 1 1295 334 337 88 0 chr13 93104078 93104259 -27180053 + L1MDa LINE L1 352 548 -6085 1 1295 397 315 102 12 chr13 93104384 93104638 -27179674 + L1MDa LINE L1 903 1179 -5454 1 1295 257 233 57 23 chr13 93104722 93104810 -27179502 + Lx8 LINE L1 7367 7457 -16 1 1295 430 275 183 0 chr13 93104860 93104991 -27179321 + RSINE1 SINE B4 5 159 -6 1 1295 264 285 64 32 chr13 93105030 93105186 -27179126 + L1MDa LINE L1 1247 1407 -5226 1 1295 671 242 80 30 chr13 93105361 93105561 -27178751 + B3 SINE B2 1 210 -6 1 1295 24 0 0 0 chr13 93105952 93105976 -27178336 + AT_rich Low_complexity Low_complexity 1 24 0 1 1295 180 111 0 0 chr13 93106009 93106036 -27178276 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1295 1169 70 0 0 chr13 93106037 93106180 -27178132 - B1_Mus2 SINE Alu -3 144 2 1 1295 465 171 163 98 chr13 93106751 93106874 -27177438 - B1_Mur3 SINE Alu -17 132 2 1 1295 203 267 6 50 chr13 93106937 93107118 -27177194 + (CACCT)n Simple_repeat Simple_repeat 4 176 0 1 1295 826 53 0 17 chr13 93108400 93108515 -27175797 + B1_Mm SINE Alu 35 147 0 1 1295 22 0 0 0 chr13 93108515 93108537 -27175775 + AT_rich Low_complexity Low_complexity 1 22 0 1 1295 1154 55 0 20 chr13 93108747 93108896 -27175416 + B1_Mus2 SINE Alu 2 147 0 1 1295 256 363 8 31 chr13 93109039 93109167 -27175145 - B4A SINE B4 -159 133 9 1 1295 403 216 117 23 chr13 93109369 93109497 -27174815 + ID_B1 SINE B4 85 224 0 1 1295 906 202 311 3 chr13 93109585 93109868 -27174444 + ORR1D2 LTR MaLR 1 370 0 1 1295 197 325 104 37 chr13 93109898 93110032 -27174280 - MIR SINE MIR -35 227 85 1 1295 27 0 0 0 chr13 93110461 93110488 -27173824 + AT_rich Low_complexity Low_complexity 1 27 0 1 1295 887 163 14 7 chr13 93111950 93112098 -27172214 + B1_Mur3 SINE Alu 1 149 0 1 1295 485 267 21 36 chr13 93112552 93112692 -27171620 + RSINE1 SINE B4 3 140 -25 1 1295 335 313 89 7 chr13 93113479 93113614 -27170698 + RSINE1 SINE B4 4 149 -16 1 1295 1100 218 69 48 chr13 93115529 93115905 -27168407 + Lx7 LINE L1 7218 7601 -95 1 1295 23 33 0 0 chr13 93115911 93115941 -27168371 + AT_rich Low_complexity Low_complexity 1 30 0 1 1295 290 278 201 24 chr13 93116136 93116424 -27167888 - ORSL-2b DNA Tip100 -134 374 36 1 1295 341 271 46 18 chr13 93117012 93117121 -27167191 + PB1D10 SINE Alu 6 117 0 1 1295 1030 214 114 48 chr13 93117870 93117998 -27166314 - MTC LTR MaLR 0 421 301 1 1295 2520 100 81 3 chr13 93117998 93118379 -27165933 + IAPLTR2a LTR ERVK 1 411 0 1 1295 1030 224 123 48 chr13 93118379 93118586 -27165726 - MTC LTR MaLR -121 300 35 1 1295 723 123 9 0 chr13 93118553 93118659 -27165653 - B1_Mus2 SINE Alu -9 138 32 1 1295 675 154 16 0 chr13 93118683 93118806 -27165506 - MTC LTR MaLR -294 127 3 1 1295 326 61 0 20 chr13 93118807 93118857 -27165455 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1295 304 295 17 26 chr13 93118962 93119077 -27165235 + PB1D10 SINE Alu 4 117 0 1 1295 507 219 138 20 chr13 93119886 93120082 -27164230 + MTEb LTR MaLR 161 379 0 1 1295 188 306 16 16 chr13 93120358 93120421 -27163891 + MIRm SINE MIR 169 231 -45 1 1295 269 244 194 58 chr13 93120526 93120547 -27163765 + ID_B1 SINE B4 63 219 -4 1 1295 462 241 11 10 chr13 93120547 93120664 -27163648 + PB1D9 SINE Alu 3 115 -5 1 1295 413 318 57 19 chr13 93121621 93121778 -27162534 + RSINE1 SINE B4 2 164 -1 1 1295 257 51 26 0 chr13 93121783 93121822 -27162490 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1295 763 118 94 0 chr13 93122408 93122535 -27161777 + B1_Mus1 SINE Alu 4 142 -6 1 1295 470 331 14 20 chr13 93122557 93122705 -27161607 + RSINE1 SINE B4 2 148 -17 1 1295 483 236 69 28 chr13 93122773 93122917 -27161395 + B3A SINE B2 3 152 -46 1 1295 229 100 40 0 chr13 93122918 93122968 -27161344 + (CA)n Simple_repeat Simple_repeat 2 53 0 1 1295 254 191 0 60 chr13 93124582 93124649 -27159663 + (CCCCG)n Simple_repeat Simple_repeat 2 64 0 1 1295 660 238 149 10 chr13 93126810 93127005 -27157307 + B4A SINE B4 55 276 -16 1 1295 914 246 113 10 chr13 93127136 93127428 -27156884 - Lx8 LINE L1 -184 7289 6968 1 1295 228 67 0 0 chr13 93128079 93128109 -27156203 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1295 733 268 40 52 chr13 93128173 93128425 -27155887 - B4 SINE B4 -43 249 1 1 1295 895 250 5 24 chr13 93129061 93129270 -27155042 + B3 SINE B2 2 206 -10 1 1295 262 343 19 9 chr13 93130880 93130986 -27153326 + PB1D10 SINE Alu 5 111 -6 1 1295 288 53 0 0 chr13 93131113 93131151 -27153161 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1295 231 209 0 23 chr13 93131880 93131924 -27152388 + ID4 SINE ID 39 81 -2 1 1295 219 236 35 35 chr13 93131924 93131937 -27152375 + ID_B1 SINE B4 40 96 -128 1 1295 1531 53 0 10 chr13 93131971 93132163 -27152149 - B2_Mm2 SINE B2 -4 191 2 1 1295 325 267 125 0 chr13 93133029 93133149 -27151163 - L1MC4a LINE L1 -164 7718 7584 1 1295 423 256 21 42 chr13 93136131 93136274 -27148038 - L1MA8 LINE L1 -149 6142 6003 1 1295 463 264 50 39 chr13 93137484 93137665 -27146647 + B3A SINE B2 1 183 -15 1 1295 470 186 12 0 chr13 93137828 93137914 -27146398 + B3A SINE B2 28 114 -84 1 1295 1889 280 134 35 chr13 93138498 93139404 -27144908 - Lx7 LINE L1 0 7473 6441 1 1295 480 18 0 0 chr13 93140021 93140078 -27144234 + (CCTG)n Simple_repeat Simple_repeat 3 59 0 1 1295 1614 163 87 13 chr13 93140165 93140606 -27143706 - RLTR31_Mur LTR ERVK 0 561 2 1 1295 335 272 88 0 chr13 93140606 93140729 -27143583 + RMER15 LTR ERVL 426 559 -16 1 1295 233 305 50 17 chr13 93141350 93141470 -27142842 - MARNA DNA Mariner -194 392 269 2 1295 1242 27 0 20 chr13 93141660 93141811 -27142501 - B1_Mus1 SINE Alu 0 148 1 2 1295 1250 48 0 0 chr13 93141884 93142031 -27142281 + B1_Mus2 SINE Alu 1 147 0 2 1295 1165 89 99 52 chr13 93142170 93142383 -27141929 - Lx2 LINE L1 0 6997 6775 2 1295 23496 136 21 83 chr13 93142381 93144186 -27140126 - Lx2 LINE L1 -352 6645 4871 2 1295 373 267 175 36 chr13 93144186 93144500 -27139812 - RLTR9A LTR ERVK -11 426 1 2 1295 23496 136 21 83 chr13 93144500 93148317 -27135995 - Lx2 LINE L1 -352 4870 1114 2 1295 1271 113 5 15 chr13 93148317 93148514 -27135798 - B2_Mm2 SINE B2 0 195 1 2 1295 3517 82 44 40 chr13 93148514 93148548 -27135764 - Lx2 LINE L1 -5544 1113 1094 2 1295 1203 54 0 0 chr13 93148548 93148695 -27135617 - B1_Mus1 SINE Alu -1 147 1 2 1295 3517 82 44 40 chr13 93148695 93149001 -27135311 - Lx2 LINE L1 -5564 1093 769 2 1295 284 238 48 0 chr13 93149207 93149291 -27135021 - L1M4 LINE L1 -1291 4855 4768 2 1295 204 40 0 0 chr13 93149292 93149317 -27134995 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 1295 1152 64 0 6 chr13 93149319 93149476 -27134836 - B2_Mm2 SINE B2 -39 156 1 2 1295 384 188 167 10 chr13 93149479 93149581 -27134731 - ID_B1 SINE B4 -2 222 105 2 1295 228 234 91 116 chr13 93149581 93149597 -27134715 - PB1D7 SINE Alu -2 115 1 2 1295 606 268 60 5 chr13 93149616 93149815 -27134497 - L1M4 LINE L1 -1411 4735 4526 2 1295 323 252 80 15 chr13 93150077 93150214 -27134098 - L1MD LINE L1 -1945 4201 4056 2 1295 740 296 141 11 chr13 93150222 93150604 -27133708 - L1M4 LINE L1 -2149 3997 3566 2 1295 1083 218 185 3 chr13 93150848 93151161 -27133151 - MTD LTR MaLR -8 411 42 2 1295 411 304 123 32 chr13 93151365 93151616 -27132696 - Lx8 LINE L1 -16 7457 7184 2 1295 262 204 0 0 chr13 93151757 93151801 -27132511 - Lx8 LINE L1 -476 6997 6954 2 1295 522 31 0 0 chr13 93151803 93151867 -27132445 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 1295 387 0 0 0 chr13 93151867 93151909 -27132403 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1295 438 294 135 43 chr13 93151915 93152100 -27132212 - B4 SINE B4 -18 274 73 2 1295 308 297 62 8 chr13 93152594 93152723 -27131589 - MLT1A1 LTR MaLR -5 403 268 2 1295 338 265 0 35 chr13 93154886 93154972 -27129340 - ID4 SINE ID 0 83 1 2 1295 3399 253 149 36 chr13 93155722 93155910 -27128402 - Lx8 LINE L1 0 7473 7249 2 1295 405 0 0 0 chr13 93155910 93155955 -27128357 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1295 3399 253 149 36 chr13 93155955 93156917 -27127395 - Lx8 LINE L1 -225 7248 6194 2 1295 1000 232 121 29 chr13 93157118 93157433 -27126879 + RMER15 LTR ERVL 43 386 -189 2 1295 315 255 244 26 chr13 93158987 93159180 -27125132 + HAL1 LINE L1 1528 1762 -745 2 1295 499 272 36 67 chr13 93159585 93159778 -27124534 - B4A SINE B4 -97 195 9 2 1295 8215 48 19 0 chr13 93160634 93161636 -27122676 + L1Md_F2 LINE L1 4566 5586 -297 2 1295 8181 41 6 6 chr13 93161637 93162631 -27121681 + L1Md_F2 LINE L1 5588 6581 -1 2 1295 620 259 60 6 chr13 93162648 93162815 -27121497 + B3A SINE B2 2 177 -21 2 1295 263 284 67 11 chr13 93163776 93163865 -27120447 - L1ME2z LINE L1 -64 6380 6287 2 1295 409 333 77 0 chr13 93163922 93163982 -27120330 - B4 SINE B4 -2 290 94 2 1295 656 176 8 4 chr13 93163982 93164105 -27120207 - B1_Mur2 SINE Alu -22 127 9 2 1295 385 221 117 8 chr13 93164165 93164293 -27120019 - L1ME2z LINE L1 -240 6204 6063 2 1295 510 276 69 25 chr13 93164599 93164844 -27119468 - MER57F LTR ERV1 -175 261 6 2 1295 339 270 36 0 chr13 93166188 93166299 -27118013 - MLT1J1 LTR MaLR -327 117 3 2 1295 393 158 40 0 chr13 93166652 93166728 -27117584 + B2_Mm2 SINE B2 2 80 -115 2 1295 474 18 0 0 chr13 93166791 93166846 -27117466 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1295 237 242 32 0 chr13 93166847 93166909 -27117403 + B1F SINE Alu 70 133 -16 2 1295 892 97 7 14 chr13 93166916 93167063 -27117249 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 2 1295 401 263 11 0 chr13 93167412 93167507 -27116805 - MLT2C1 LTR ERVL -59 504 409 2 1295 603 275 7 0 chr13 93167522 93167660 -27116652 + B1_Mur1 SINE Alu 3 141 -8 2 1295 458 228 48 19 chr13 93167681 93167784 -27116528 - PB1D10 SINE Alu -7 110 5 2 1295 622 269 18 18 chr13 93167695 93167865 -27116447 - ID_B1 SINE B4 -52 172 3 2 1295 640 197 71 21 chr13 93168064 93168204 -27116108 - B1_Mus2 SINE Alu 0 147 1 2 1295 483 33 0 0 chr13 93168742 93168803 -27115509 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 1295 287 362 112 28 chr13 93170008 93170258 -27114054 - L2b LINE L2 -18 3357 3087 2 1295 7104 91 45 15 chr13 93170517 93171721 -27112591 - Lx LINE L1 -1 6653 5413 2 1295 396 40 0 0 chr13 93171796 93171846 -27112466 + (CAGA)n Simple_repeat Simple_repeat 2 51 0 2 1295 432 0 0 0 chr13 93172489 93172537 -27111775 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1295 188 135 27 0 chr13 93172787 93172824 -27111488 + (ATG)n Simple_repeat Simple_repeat 1 38 0 2 1295 458 309 124 67 chr13 93172851 93173181 -27111131 + MLT2D LTR ERVL 65 413 -1 2 1295 366 220 90 18 chr13 93173320 93173431 -27110881 + PB1D9 SINE Alu 2 120 0 2 1295 1749 151 147 3 chr13 93173912 93174224 -27110088 - ORR1B2 LTR MaLR -8 359 3 2 1295 634 268 7 21 chr13 93174291 93174432 -27109880 + B3 SINE B2 75 213 -3 2 1295 431 216 64 64 chr13 93174838 93174932 -27109380 - B1_Mur1 SINE Alu -6 114 21 2 1295 318 284 0 83 chr13 93174850 93174946 -27109366 - MT2B LTR ERVL -340 261 174 2 1295 383 257 6 9 chr13 93175046 93175143 -27109169 - PB1D10 SINE Alu -10 107 16 2 1295 262 293 28 39 chr13 93175168 93175349 -27108963 + HAL1 LINE L1 972 1150 -1357 2 1295 658 328 84 30 chr13 93176152 93176316 -27107996 - ORR1E LTR MaLR 0 359 185 2 1295 630 39 0 0 chr13 93176316 93176393 -27107919 + (GA)n Simple_repeat Simple_repeat 2 78 0 2 1295 658 328 84 30 chr13 93176393 93176561 -27107751 - ORR1E LTR MaLR -175 184 9 2 1295 3552 23 0 130 chr13 93176695 93177196 -27107116 - RLTR10C LTR ERVK 0 436 1 2 1295 345 307 72 18 chr13 93177833 93177999 -27106313 - LTR16E1 LTR ERVL -4 534 360 2 1295 364 118 0 29 chr13 93178372 93178442 -27105870 + (TCC)n Simple_repeat Simple_repeat 2 69 0 2 1295 224 324 56 0 chr13 93178883 93178954 -27105358 - ID4_ SINE ID -2 81 7 2 1295 392 272 150 16 chr13 93178969 93179096 -27105216 - B1F SINE Alu -1 148 5 2 1295 229 274 80 45 chr13 93179350 93179438 -27104874 - RMER15 LTR ERVL -114 461 371 2 1295 254 339 16 8 chr13 93179513 93179641 -27104671 - Lx8 LINE L1 -307 7166 7038 2 1295 1687 31 0 0 chr13 93179716 93179908 -27104404 + B2_Mm1a SINE B2 2 193 0 2 1295 306 0 0 0 chr13 93179908 93179942 -27104370 + (A)n Simple_repeat Simple_repeat 1 34 0 2 1295 257 51 0 25 chr13 93180901 93180941 -27103371 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1295 456 231 9 44 chr13 93181335 93181448 -27102864 - PB1D10 SINE Alu 0 117 9 2 1295 22 0 0 0 chr13 93181482 93181504 -27102808 + AT_rich Low_complexity Low_complexity 1 22 0 2 1295 960 296 40 54 chr13 93182498 93182730 -27101582 + B4A SINE B4 1 233 -59 2 1295 207 0 0 0 chr13 93182730 93182753 -27101559 + (CAGAGA)n Simple_repeat Simple_repeat 2 24 0 2 1295 960 296 40 54 chr13 93182753 93182816 -27101496 + B4A SINE B4 234 292 0 2 1295 2155 147 73 13 chr13 93183140 93183512 -27100800 + ORR1B1 LTR MaLR 1 394 0 2 1295 358 80 0 39 chr13 93183517 93183569 -27100743 - MT2B2 LTR ERVL 0 584 535 2 1295 334 227 37 93 chr13 93183594 93183701 -27100611 - PB1D10 SINE Alu -15 102 2 2 1295 4438 178 118 11 chr13 93183786 93184647 -27099665 + RMER17B LTR ERVK 1 954 -4 2 1295 209 290 110 83 chr13 93184647 93184747 -27099565 + MIR3 SINE MIR 64 167 -41 2 1295 573 245 84 98 chr13 93184928 93185177 -27099135 - MTEb LTR MaLR -5 374 73 2 1295 737 22 11 0 chr13 93185355 93185446 -27098866 + (GA)n Simple_repeat Simple_repeat 1 92 0 2 1295 306 259 47 12 chr13 93185811 93185897 -27098415 - MER34 LTR ERV1 -71 471 383 2 1295 748 342 19 30 chr13 93185964 93186226 -27098086 + B4A SINE B4 32 290 -2 2 1295 257 292 52 10 chr13 93186558 93186655 -27097657 - MER34 LTR ERV1 -473 114 14 2 1295 268 380 51 7 chr13 93187165 93187303 -27097009 + MT2A LTR ERVL 95 238 -295 2 1295 719 59 10 0 chr13 93187454 93187555 -27096757 + (TAGA)n Simple_repeat Simple_repeat 1 102 0 2 1295 403 288 31 16 chr13 93187576 93187703 -27096609 - MER58B DNA MER1_type -81 260 132 2 1295 4299 115 43 8 chr13 93187852 93188507 -27095805 + RLTR33 LTR ERVK 1 678 0 2 1295 298 314 29 88 chr13 93188507 93188642 -27095670 - MER58B DNA MER1_type -214 127 1 2 1295 189 0 0 0 chr13 93190223 93190244 -27094068 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1296 322 268 0 14 chr13 93192435 93192507 -27091805 - PB1D7 SINE Alu 0 120 50 2 1296 515 308 104 98 chr13 93193198 93193554 -27090758 - MLT1A1 LTR MaLR -7 401 1 2 1296 651 302 103 5 chr13 93193828 93194041 -27090271 + MLT1D LTR MaLR 1 234 -271 2 1296 379 147 18 18 chr13 93194078 93194189 -27090123 + (CAGAGA)n Simple_repeat Simple_repeat 4 114 0 2 1296 590 297 72 39 chr13 93194190 93194495 -27089817 + MLT1D LTR MaLR 181 495 -10 2 1296 274 291 100 0 chr13 93194531 93194641 -27089671 + L1M5 LINE L1 5541 5661 -512 2 1296 216 143 167 0 chr13 93195338 93195380 -27088932 - PB1 SINE Alu -4 123 75 2 1296 22 0 0 0 chr13 93196384 93196406 -27087906 + GC_rich Low_complexity Low_complexity 1 22 0 2 1296 891 201 77 5 chr13 93199466 93199661 -27084651 + B3 SINE B2 1 209 -7 2 1296 258 333 29 0 chr13 93199937 93200006 -27084306 - B4 SINE B4 -2 290 220 2 1296 1083 193 5 0 chr13 93200007 93200407 -27083905 + (TG)n Simple_repeat Simple_repeat 1 402 0 2 1296 810 293 16 37 chr13 93200504 93200747 -27083565 - B4 SINE B4 -42 250 2 2 1296 231 370 37 9 chr13 93200916 93201025 -27083287 - MIRb SINE MIR -119 149 38 2 1296 387 299 10 0 chr13 93201467 93201564 -27082748 + PB1 SINE Alu 1 98 -29 2 1296 825 261 124 8 chr13 93201578 93201837 -27082475 + B4 SINE B4 3 291 -1 2 1296 342 0 0 0 chr13 93202153 93202191 -27082121 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1296 508 208 132 8 chr13 93202293 93202414 -27081898 + B1_Mur2 SINE Alu 1 136 -13 3 1296 207 0 0 0 chr13 93202414 93202437 -27081875 + (CAAA)n Simple_repeat Simple_repeat 1 23 0 3 1296 327 78 0 0 chr13 93202519 93202570 -27081742 + (T)n Simple_repeat Simple_repeat 1 51 0 3 1296 228 293 53 79 chr13 93203937 93204089 -27080223 - HAL1 LINE L1 -898 1609 1462 3 1296 455 200 53 9 chr13 93204318 93204432 -27079880 - MTD LTR MaLR -23 396 272 3 1296 597 297 86 5 chr13 93204446 93204632 -27079680 - MTD LTR MaLR -201 218 18 3 1296 366 262 65 9 chr13 93204759 93204867 -27079445 - PB1D10 SINE Alu 0 117 4 3 1296 399 241 0 0 chr13 93204789 93204872 -27079440 - ID_B1 SINE B4 -62 162 80 3 1296 242 164 129 16 chr13 93204843 93204905 -27079407 - Charlie9 DNA MER1_type -339 2418 2350 3 1296 242 255 0 0 chr13 93205295 93205346 -27078966 - HAL1 LINE L1 -2015 492 442 3 1296 375 257 56 19 chr13 93205693 93205800 -27078512 - HAL1 LINE L1 -2365 142 32 3 1296 446 282 32 32 chr13 93205984 93206138 -27078174 - RSINE1 SINE B4 -7 158 5 3 1296 297 0 0 0 chr13 93206148 93206181 -27078131 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 3 1296 305 292 0 0 chr13 93206182 93206254 -27078058 - ID4 SINE ID -9 74 3 3 1296 526 256 0 6 chr13 93206623 93206765 -27077547 - B1F2 SINE Alu 0 149 10 3 1296 811 197 93 26 chr13 93207276 93207469 -27076843 - B3 SINE B2 -6 210 5 3 1296 691 274 52 52 chr13 93207614 93207864 -27076448 - B4A SINE B4 -41 251 2 3 1296 417 241 200 64 chr13 93210340 93210575 -27073737 + B4 SINE B4 1 267 -25 3 1296 264 30 0 0 chr13 93210799 93210832 -27073480 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 3 1296 824 105 7 0 chr13 93211935 93212078 -27072234 + (TG)n Simple_repeat Simple_repeat 2 145 0 3 1296 378 0 0 0 chr13 93212612 93212654 -27071658 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1296 347 312 60 43 chr13 93212781 93212965 -27071347 + B4A SINE B4 1 187 -105 3 1296 411 300 65 59 chr13 93212957 93213100 -27071212 + B4A SINE B4 122 267 -25 3 1296 576 65 0 0 chr13 93213100 93213177 -27071135 + (CA)n Simple_repeat Simple_repeat 1 77 0 3 1296 411 300 65 59 chr13 93213177 93213203 -27071109 + B4A SINE B4 268 292 0 3 1296 417 222 138 95 chr13 93213212 93213401 -27070911 - RLTR14 LTR ERV1 0 382 186 3 1296 288 259 59 0 chr13 93213450 93213535 -27070777 + CT-rich Low_complexity Low_complexity 2 91 0 3 1296 360 336 9 0 chr13 93213554 93213664 -27070648 - PB1 SINE Alu -16 111 1 3 1296 507 282 0 0 chr13 93213777 93213894 -27070418 - PB1D10 SINE Alu 0 117 1 3 1296 420 290 48 51 chr13 93214426 93214753 -27069559 + ORR1E LTR MaLR 2 379 0 3 1296 1203 75 13 0 chr13 93214812 93214971 -27069341 + B2_Mm2 SINE B2 1 161 -34 3 1296 279 79 0 0 chr13 93214971 93215009 -27069303 + (TAAG)n Simple_repeat Simple_repeat 1 38 0 3 1296 375 23 0 0 chr13 93215745 93215789 -27068523 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1296 236 189 53 70 chr13 93215791 93215823 -27068489 - ID4_ SINE ID -12 71 40 3 1296 1334 224 74 17 chr13 93215823 93216173 -27068139 + ORR1D2 LTR MaLR 1 370 0 3 1296 236 189 53 70 chr13 93216173 93216197 -27068115 - ID4_ SINE ID -44 39 16 3 1296 580 285 182 15 chr13 93218085 93218481 -27065831 - L1ME3 LINE L1 -118 6044 5583 3 1296 452 254 49 53 chr13 93218501 93218726 -27065586 - L1ME3 LINE L1 -674 5490 5267 3 1296 811 201 150 6 chr13 93218786 93218966 -27065346 - B3 SINE B2 -1 215 10 3 1296 414 275 145 0 chr13 93219347 93219485 -27064827 + RSINE1 SINE B4 4 161 -4 3 1296 450 294 0 18 chr13 93219660 93219771 -27064541 - PB1D10 SINE Alu -8 109 1 3 1296 342 0 0 0 chr13 93219990 93220028 -27064284 + (TA)n Simple_repeat Simple_repeat 1 38 0 3 1296 263 305 37 0 chr13 93220702 93220784 -27063528 + RSINE1 SINE B4 3 87 -78 3 1296 377 244 46 54 chr13 93220798 93220928 -27063384 + RSINE1 SINE B4 37 165 0 3 1296 347 316 49 38 chr13 93221583 93221767 -27062545 - L1ME3B LINE L1 -9 6231 6046 3 1296 317 322 37 32 chr13 93221809 93221998 -27062314 + L1_Mur3 LINE L1 2346 2535 -3345 3 1296 269 250 42 0 chr13 93222294 93222366 -27061946 - ID SINE ID -143 81 7 3 1296 879 306 94 66 chr13 93222511 93223354 -27060958 + L1_Rod LINE L1 4966 5831 -16 3 1296 313 183 42 232 chr13 93223354 93223496 -27060816 + RMER15 LTR ERVL 10 124 -451 3 1296 461 175 10 0 chr13 93223508 93223611 -27060701 + CT-rich Low_complexity Low_complexity 2 105 0 3 1296 968 292 33 27 chr13 93223631 93223930 -27060382 + RMER15 LTR ERVL 275 575 0 3 1296 727 184 177 0 chr13 93224259 93224406 -27059906 + ORR1C2 LTR MaLR 1 173 -201 3 1296 4068 8 6 0 chr13 93224415 93224902 -27059410 - L1Md_A LINE L1 -546 6036 5547 3 1296 4958 22 29 0 chr13 93224902 93225451 -27058861 + L1Md_A LINE L1 6018 6582 0 3 1296 849 132 93 12 chr13 93225496 93225657 -27058655 + ORR1C2 LTR MaLR 209 382 -2 3 1296 764 254 126 11 chr13 93225659 93225894 -27058418 + L1M2 LINE L1 4280 4607 -1539 3 1296 1586 207 78 14 chr13 93225894 93226242 -27058070 - ORR1D2 LTR MaLR 0 370 1 3 1296 4114 233 103 41 chr13 93226244 93227531 -27056781 - ORR1D2-int LTR MaLR -2 1368 2 3 1296 1442 234 63 14 chr13 93227532 93227883 -27056429 - ORR1D2 LTR MaLR 0 370 3 3 1296 764 293 45 18 chr13 93227883 93228152 -27056160 + L1M2 LINE L1 4594 4873 -1270 3 1296 299 160 0 0 chr13 93228601 93228651 -27055661 - B1_Mur4 SINE Alu -1 149 100 3 1296 658 258 64 76 chr13 93228632 93228896 -27055416 + B4A SINE B4 29 289 -3 3 1296 450 217 113 0 chr13 93229465 93229571 -27054741 - B1_Mur2 SINE Alu -30 119 2 3 1296 327 227 50 83 chr13 93229468 93229588 -27054724 - MT2B LTR ERVL -336 265 150 3 1296 527 248 111 26 chr13 93230195 93230348 -27053964 + B3 SINE B2 3 168 -48 3 1296 1421 161 9 0 chr13 93230802 93231026 -27053286 + URR1A DNA MER1_type 1 226 0 3 1296 285 29 0 0 chr13 93231254 93231288 -27053024 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1296 232 294 89 48 chr13 93231561 93231729 -27052583 - RLTR22_Mur LTR ERVK -367 1481 1307 3 1296 4234 37 4 4 chr13 93231946 93232430 -27051882 + L1Md_F2 LINE L1 6099 6582 0 3 1296 415 203 2 2 chr13 93233510 93233608 -27050704 + L1_Mur1 LINE L1 672 749 -6233 3 1296 3518 92 0 13 chr13 93233609 93234083 -27050229 + Lx3B LINE L1 6504 6971 -2 3 1296 33 0 0 0 chr13 93234084 93234117 -27050195 + AT_rich Low_complexity Low_complexity 1 33 0 3 1296 588 170 372 19 chr13 93234121 93234277 -27050035 + B3 SINE B2 2 212 -4 3 1296 238 239 45 0 chr13 93234299 93234366 -27049946 + MLT1N2 LTR MaLR 487 556 -6 3 1296 696 95 250 0 chr13 93234884 93235000 -27049312 - B1_Mus1 SINE Alu -3 145 1 3 1296 302 157 0 0 chr13 93235189 93235240 -27049072 + B3A SINE B2 2 52 -146 3 1296 772 260 23 0 chr13 93235631 93235808 -27048504 - B3A SINE B2 -16 182 2 3 1296 190 116 23 23 chr13 93235838 93235882 -27048430 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1296 351 304 78 21 chr13 93235904 93236045 -27048267 - RSINE1 SINE B4 -15 150 2 3 1296 595 236 16 8 chr13 93236318 93236442 -27047870 - ID_B1 SINE B4 -9 215 91 3 1296 479 280 55 89 chr13 93236499 93236859 -27047453 + RLTR11B LTR ERVK 1 359 -82 3 1296 2355 119 25 0 chr13 93237325 93237686 -27046626 + ORR1B1 LTR MaLR 17 386 -8 3 1296 820 206 211 0 chr13 93238635 93238810 -27045502 + B3 SINE B2 1 212 -4 3 1296 741 190 27 27 chr13 93239001 93239147 -27045165 - B1F2 SINE Alu -3 146 1 3 1296 248 184 69 126 chr13 93239715 93239802 -27044510 + RLTR25B LTR ERVK 428 509 -519 3 1296 729 149 9 0 chr13 93239730 93239844 -27044468 + B1_Mus2 SINE Alu 33 147 0 3 1296 194 0 39 0 chr13 93239853 93239879 -27044433 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1296 227 222 0 100 chr13 93239920 93239990 -27044322 + ID_B1 SINE B4 76 138 -86 3 1296 255 258 0 57 chr13 93239939 93240009 -27044303 + B1F1 SINE Alu 11 76 -73 3 1296 762 214 25 43 chr13 93240944 93241105 -27043207 + RSINE1 SINE B4 8 165 0 3 1296 210 363 48 97 chr13 93241105 93241129 -27043183 + B3A SINE B2 7 182 -16 3 1296 383 267 13 0 chr13 93241165 93241240 -27043072 + ID4 SINE ID 2 77 -6 3 1296 233 293 0 0 chr13 93241479 93241537 -27042775 + (CATA)n Simple_repeat Simple_repeat 3 60 0 3 1296 2720 157 56 18 chr13 93241896 93242522 -27041790 - RMER6A LTR ERVK 0 690 3 3 1296 594 230 161 0 chr13 93242716 93242877 -27041435 - B3A SINE B2 -10 188 2 3 1296 2433 143 19 72 chr13 93243425 93243840 -27040472 + ORR1B1 LTR MaLR 2 394 0 3 1296 359 341 88 33 chr13 93244603 93244818 -27039494 + MLT1H-int LTR MaLR 504 730 -679 3 1296 476 152 0 164 chr13 93244821 93244931 -27039381 + B3 SINE B2 1 92 -124 3 1296 483 48 0 0 chr13 93244944 93245006 -27039306 + (TG)n Simple_repeat Simple_repeat 1 62 0 3 1296 616 143 166 6 chr13 93245015 93245143 -27039169 - B2_Mm2 SINE B2 -61 155 3 3 1296 249 312 8 142 chr13 93245177 93245201 -27039111 + MLT1H-int LTR MaLR 769 792 -617 3 1296 1402 101 27 0 chr13 93245201 93245389 -27038923 + B2_Mm2 SINE B2 2 194 -1 3 1296 249 312 8 142 chr13 93245389 93245491 -27038821 + MLT1H-int LTR MaLR 793 878 -531 3 1296 482 291 41 28 chr13 93245562 93245707 -27038605 - RSINE1 SINE B4 -16 149 3 3 1296 294 200 18 0 chr13 93246387 93246442 -27037870 + L1M5 LINE L1 5716 5771 -408 3 1296 233 225 108 40 chr13 93246655 93246729 -27037583 + PB1D10 SINE Alu 2 80 -37 3 1296 1042 239 34 0 chr13 93246760 93246965 -27037347 + B3 SINE B2 2 213 -3 3 1296 265 278 10 91 chr13 93247612 93247629 -27036683 + MT2B2 LTR ERVL 150 158 -426 3 1296 567 194 32 0 chr13 93247629 93247722 -27036590 + B1F SINE Alu 1 96 -53 3 1296 222 37 0 0 chr13 93247727 93247754 -27036558 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1296 964 291 112 28 chr13 93248007 93248050 -27036262 - L1MA9 LINE L1 -110 6202 6160 3 1296 438 94 0 0 chr13 93248050 93248114 -27036198 + (TG)n Simple_repeat Simple_repeat 2 65 0 3 1296 964 291 112 28 chr13 93248114 93248614 -27035698 - L1MA9 LINE L1 -153 6159 5614 3 1296 3927 26 20 59 chr13 93248948 93249442 -27034870 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1296 1102 198 20 5 chr13 93249689 93249892 -27034420 + B3 SINE B2 1 206 -10 3 1296 32 0 0 0 chr13 93249893 93249925 -27034387 + AT_rich Low_complexity Low_complexity 1 32 0 4 1296 689 258 147 11 chr13 93250013 93250197 -27034115 - B3 SINE B2 -7 209 1 4 1296 212 293 70 47 chr13 93250511 93250597 -27033715 + PB1D10 SINE Alu 9 96 -21 4 1296 431 289 52 0 chr13 93250887 93251022 -27033290 - Tigger5 DNA MER2_type -12 2394 2253 4 1296 1435 220 42 33 chr13 93251042 93251376 -27032936 - ORR1D1 LTR MaLR -37 337 1 4 1296 1723 16 27 0 chr13 93251473 93251660 -27032652 + B2_Mm1a SINE B2 1 192 -1 4 1296 369 307 163 34 chr13 93252033 93252272 -27032040 + MLT1D LTR MaLR 141 410 -95 4 1296 672 280 120 34 chr13 93252478 93252744 -27031568 - B4 SINE B4 -2 290 2 4 1296 1241 87 11 26 chr13 93253145 93253334 -27030978 + B2_Mm1t SINE B2 7 192 -1 4 1296 1219 120 0 17 chr13 93253347 93253525 -27030787 + B2_Mm2 SINE B2 2 176 -19 4 1296 715 261 226 15 chr13 93254413 93254806 -27029506 - RMER5 LTR ERV1 -7 527 52 4 1296 667 294 93 47 chr13 93255085 93255528 -27028784 + L1MA8 LINE L1 5657 6119 -172 4 1296 1392 76 48 21 chr13 93255923 93256111 -27028201 + B2_Mm2 SINE B2 1 193 -2 4 1296 1429 87 37 16 chr13 93256526 93256713 -27027599 + B2_Mm2 SINE B2 2 192 -3 4 1296 192 158 0 0 chr13 93257835 93257873 -27026439 + (TA)n Simple_repeat Simple_repeat 2 39 0 4 1296 453 227 0 21 chr13 93258940 93259084 -27025228 + (TG)n Simple_repeat Simple_repeat 1 141 0 4 1296 281 235 0 12 chr13 93259118 93259204 -27025108 + (TG)n Simple_repeat Simple_repeat 1 85 0 4 1296 411 215 5 43 chr13 93259238 93259423 -27024889 + (TG)n Simple_repeat Simple_repeat 2 179 0 4 1296 230 203 16 48 chr13 93259423 93259506 -27024806 + (TATG)n Simple_repeat Simple_repeat 1 80 0 4 1296 281 235 0 12 chr13 93259506 93259592 -27024720 + (TG)n Simple_repeat Simple_repeat 1 85 0 4 1296 482 209 0 28 chr13 93259626 93259769 -27024543 + (TG)n Simple_repeat Simple_repeat 1 139 0 4 1296 224 200 0 18 chr13 93259803 93259859 -27024453 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 1296 509 227 0 25 chr13 93259893 93260173 -27024139 + (TG)n Simple_repeat Simple_repeat 1 272 0 4 1296 714 259 146 87 chr13 93260176 93260451 -27023861 - B4A SINE B4 0 292 2 4 1296 3412 140 26 31 chr13 93260853 93261465 -27022847 + RLTR25A LTR ERVK 1 609 -494 4 1296 428 192 39 0 chr13 93262093 93262171 -27022141 + ID2 SINE ID 1 81 -2 4 1296 375 288 65 141 chr13 93262239 93262409 -27021903 + RSINE1 SINE B4 9 165 0 4 1296 1514 33 38 22 chr13 93263194 93263379 -27020933 + B2_Mm2 SINE B2 1 188 -7 4 1296 829 187 65 0 chr13 93263389 93263528 -27020784 + B1_Mur3 SINE Alu 2 149 0 4 1296 472 15 0 30 chr13 93263714 93263781 -27020531 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1296 643 285 83 20 chr13 93264200 93264404 -27019908 + ID_B1 SINE B4 1 217 -7 4 1296 1124 21 7 7 chr13 93265114 93265256 -27019056 + B1_Mus2 SINE Alu 6 147 0 4 1296 183 100 0 0 chr13 93265256 93265286 -27019026 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 4 1296 1251 271 150 42 chr13 93265468 93266361 -27017951 + L1MA5 LINE L1 3736 4790 -1353 4 1296 1029 93 0 0 chr13 93266361 93266598 -27017714 + (CA)n Simple_repeat Simple_repeat 1 237 0 4 1296 1251 292 96 29 chr13 93266598 93266841 -27017471 + L1MA5 LINE L1 4791 5061 -1082 4 1296 258 306 59 0 chr13 93267085 93267170 -27017142 + PB1D9 SINE Alu 31 120 0 4 1296 344 225 160 1 chr13 93267178 93267331 -27016981 + L1MA5 LINE L1 5317 5490 -699 4 1296 241 246 30 15 chr13 93267351 93267417 -27016895 - ID4 SINE ID -11 72 6 4 1296 348 239 128 21 chr13 93267418 93267559 -27016753 + L1MA5 LINE L1 5510 5665 -635 4 1296 333 355 0 86 chr13 93267574 93267691 -27016621 + PB1D10 SINE Alu 1 107 -10 4 1296 1123 277 84 67 chr13 93267747 93268355 -27015957 + L1MA5 LINE L1 5677 6294 -6 4 1296 257 277 67 63 chr13 93268366 93268493 -27015819 + L1M5 LINE L1 5259 5394 -779 4 1296 4646 20 0 0 chr13 93268493 93268986 -27015326 + MT2_Mm LTR ERVL 1 493 0 4 1296 257 277 67 63 chr13 93268986 93269047 -27015265 + L1M5 LINE L1 5395 5446 -727 4 1296 1533 63 11 0 chr13 93269047 93269236 -27015076 + B2_Mm1t SINE B2 2 192 -1 4 1296 257 277 67 63 chr13 93269236 93269362 -27014950 + L1M5 LINE L1 5447 5575 -598 4 1296 423 183 60 24 chr13 93269789 93269873 -27014439 - PB1D9 SINE Alu -1 119 33 4 1296 843 150 122 39 chr13 93269901 93270081 -27014231 - B2_Mm2 SINE B2 0 195 1 4 1296 24 85 0 0 chr13 93270083 93270142 -27014170 + AT_rich Low_complexity Low_complexity 1 59 0 4 1296 1625 172 141 14 chr13 93270430 93270793 -27013519 - RMER3D-int LTR ERVK -1439 1403 1014 4 1296 227 75 75 0 chr13 93270819 93270859 -27013453 + (TTTCC)n Simple_repeat Simple_repeat 3 45 0 4 1296 526 307 43 32 chr13 93270964 93271148 -27013164 + B4A SINE B4 26 211 -81 4 1296 1917 175 29 26 chr13 93271148 93271494 -27012818 + ORR1B1 LTR MaLR 1 347 -47 4 1296 1358 92 23 0 chr13 93271504 93271677 -27012635 + B2_Mm2 SINE B2 2 178 -17 4 1296 531 82 0 0 chr13 93271679 93271752 -27012560 + (GGGA)n Simple_repeat Simple_repeat 4 76 0 4 1296 288 173 39 0 chr13 93271766 93271818 -27012494 + ORR1B1 LTR MaLR 314 367 0 4 1296 1852 119 109 3 chr13 93271851 93272162 -27012150 + RLTR15 LTR ERVK 1 344 -15 4 1296 889 284 70 16 chr13 93272735 93272993 -27011319 + B4A SINE B4 3 274 -18 4 1296 251 188 29 59 chr13 93273228 93273296 -27011016 - B3A SINE B2 -132 66 1 4 1296 223 233 0 0 chr13 93274161 93274204 -27010108 + (CAGG)n Simple_repeat Simple_repeat 2 44 0 4 1296 24 0 0 0 chr13 93274279 93274303 -27010009 + AT_rich Low_complexity Low_complexity 1 24 0 4 1296 306 0 0 0 chr13 93274334 93274368 -27009944 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1296 233 318 116 7 chr13 93274818 93274973 -27009339 + ORR1E LTR MaLR 19 190 -169 4 1296 25 65 0 0 chr13 93275751 93275797 -27008515 + AT_rich Low_complexity Low_complexity 1 46 0 4 1296 199 300 238 21 chr13 93275865 93276008 -27008304 - MIRb SINE MIR -59 209 36 4 1296 284 253 49 37 chr13 93276142 93276224 -27008088 - ID4_ SINE ID 0 83 1 4 1296 22 35 0 0 chr13 93277230 93277259 -27007053 + AT_rich Low_complexity Low_complexity 1 29 0 4 1296 469 223 72 58 chr13 93277717 93277855 -27006457 + ID_B1 SINE B4 80 219 -5 4 1296 198 0 0 0 chr13 93278468 93278490 -27005822 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1296 1180 95 0 0 chr13 93278495 93278642 -27005670 + B1_Mus1 SINE Alu 2 148 0 4 1296 456 239 25 41 chr13 93279318 93279440 -27004872 + B1F2 SINE Alu 30 149 0 4 1296 281 308 99 33 chr13 93280362 93280513 -27003799 + RSINE1 SINE B4 3 163 -2 4 1296 296 316 64 21 chr13 93280800 93280961 -27003351 - MIRc SINE MIR -58 218 47 4 1296 260 229 65 16 chr13 93281323 93281385 -27002927 + B1_Mur1 SINE Alu 78 142 -7 4 1296 357 24 0 0 chr13 93282721 93282763 -27001549 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 4 1296 879 109 11 0 chr13 93282772 93282915 -27001397 - B2_Mm2 SINE B2 -42 156 1 4 1296 385 265 32 52 chr13 93282925 93283080 -27001232 + Charlie1b DNA MER1_type 372 523 0 4 1296 682 234 117 69 chr13 93283112 93283300 -27001012 + B3A SINE B2 2 198 0 4 1296 23 0 0 0 chr13 93283305 93283328 -27000984 + AT_rich Low_complexity Low_complexity 1 23 0 4 1296 490 250 31 8 chr13 93283396 93283525 -27000787 - Tigger1 DNA MER2_type -97 2321 2190 4 1296 398 267 43 8 chr13 93283523 93283640 -27000672 - Tigger1 DNA MER2_type -2294 124 4 4 1296 258 268 51 43 chr13 93284323 93284440 -26999872 - ORR1E LTR MaLR -167 192 75 4 1296 270 224 15 15 chr13 93284527 93284595 -26999717 - ORR1E LTR MaLR -291 68 1 4 1296 314 296 138 44 chr13 93285545 93285820 -26998492 + LTR33A_ LTR ERVL 7 307 -488 4 1296 343 368 0 14 chr13 93285820 93285966 -26998346 + HAL1-2a_MD LINE L1 2356 2499 -525 4 1296 392 276 147 54 chr13 93285967 93286425 -26997887 + LTR33A_ LTR ERVL 256 632 -163 4 1296 808 132 33 8 chr13 93287036 93287158 -26997154 - B1_Mus1 SINE Alu -2 146 22 4 1296 212 337 160 33 chr13 93287191 93287413 -26996899 + L2b LINE L2 2921 3171 -255 4 1296 396 0 0 0 chr13 93288052 93288096 -26996216 + (TG)n Simple_repeat Simple_repeat 2 45 0 4 1296 376 243 14 0 chr13 93288096 93288166 -26996146 - ID4_ SINE ID -11 72 2 4 1296 27 0 0 0 chr13 93288444 93288471 -26995841 + AT_rich Low_complexity Low_complexity 1 27 0 4 1296 480 48 0 0 chr13 93288767 93288830 -26995482 + (CA)n Simple_repeat Simple_repeat 1 63 0 4 1296 533 275 30 101 chr13 93289688 93289886 -26994426 + MTEa LTR MaLR 1 184 -195 4 1296 725 310 117 40 chr13 93289723 93290227 -26994085 + MLT2B5 LTR ERVL 167 709 -8 4 1296 23 0 0 0 chr13 93290230 93290253 -26994059 + AT_rich Low_complexity Low_complexity 1 23 0 4 1296 1269 54 0 0 chr13 93290373 93290520 -26993792 + B1_Mus2 SINE Alu 1 147 0 4 1296 474 120 0 0 chr13 93290520 93290595 -26993717 + (A)n Simple_repeat Simple_repeat 1 75 0 4 1296 180 245 20 0 chr13 93292369 93292418 -26991894 - L2 LINE L2 -1576 1843 1794 4 1296 1347 241 125 16 chr13 93293520 93293896 -26990416 + MTD LTR MaLR 1 417 -2 4 1296 734 320 62 10 chr13 93294531 93294776 -26989536 - B4A SINE B4 -11 281 15 4 1296 485 104 13 0 chr13 93295372 93295449 -26988863 + (GGGA)n Simple_repeat Simple_repeat 2 79 0 4 1296 320 282 183 17 chr13 93295636 93295816 -26988496 + L1MEg LINE L1 1061 1270 -4814 4 1296 330 291 77 23 chr13 93296429 93296443 -26987869 - B1F SINE Alu -1 148 12 4 1296 424 302 17 0 chr13 93296443 93296559 -26987753 - ID_B1 SINE B4 -14 210 93 4 1296 422 239 66 22 chr13 93296558 93296695 -26987617 + MER105 DNA DNA 54 196 -8 4 1296 581 266 62 0 chr13 93296811 93296939 -26987373 - B1_Mur1 SINE Alu -7 142 7 4 1296 28 0 0 0 chr13 93296955 93296983 -26987329 + AT_rich Low_complexity Low_complexity 1 28 0 4 1296 755 206 35 28 chr13 93296994 93297139 -26987173 + B1F2 SINE Alu 1 146 -3 4 1296 1467 44 44 0 chr13 93297176 93297356 -26986956 + B2_Mm2 SINE B2 2 189 -6 4 1296 1027 166 0 0 chr13 93297399 93297544 -26986768 + B1_Mus1 SINE Alu 4 148 0 4 1296 3459 40 2 5 chr13 93297583 93297980 -26986332 + MTA_Mm LTR MaLR 1 396 0 4 1296 423 264 37 52 chr13 93298398 93298534 -26985778 - RSINE1 SINE B4 -29 136 3 4 1296 247 273 157 7 chr13 93298911 93299051 -26985261 - L2 LINE L2 -926 2493 2333 4 1296 35 71 0 0 chr13 93299390 93299460 -26984852 + AT_rich Low_complexity Low_complexity 1 70 0 4 1296 264 100 0 0 chr13 93299941 93299981 -26984331 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1296 180 111 0 0 chr13 93300466 93300493 -26983819 + (CCCGG)n Simple_repeat Simple_repeat 2 28 0 5 1296 234 178 22 0 chr13 93301593 93301638 -26982674 + B4 SINE B4 2 47 -245 5 1296 259 288 0 0 chr13 93302281 93302340 -26981972 + MIRb SINE MIR 53 111 -157 5 1296 2292 147 6 6 chr13 93302470 93302812 -26981500 + ORR1A1 LTR MaLR 5 346 0 5 1296 477 162 321 12 chr13 93302878 93303040 -26981272 + B3 SINE B2 1 212 -4 5 1296 387 105 0 0 chr13 93303241 93303298 -26981014 + (TTTC)n Simple_repeat Simple_repeat 2 58 0 5 1296 309 26 0 0 chr13 93303305 93303343 -26980969 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1296 666 173 103 22 chr13 93303377 93303394 -26980918 - B1_Mus1 SINE Alu 0 148 118 5 1296 360 0 0 0 chr13 93303394 93303434 -26980878 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1296 666 173 103 22 chr13 93303434 93303552 -26980760 - B1_Mus1 SINE Alu -31 117 3 5 1296 483 18 0 0 chr13 93303749 93303805 -26980507 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 1296 22 0 0 0 chr13 93304229 93304251 -26980061 + AT_rich Low_complexity Low_complexity 1 22 0 5 1296 309 247 163 12 chr13 93304360 93304446 -26979866 - PB1D7 SINE Alu -1 119 21 5 1296 1130 186 28 5 chr13 93304966 93305177 -26979135 + B3 SINE B2 1 216 0 5 1296 239 219 0 0 chr13 93305437 93305478 -26978834 + ID4_ SINE ID 16 56 -27 5 1296 543 81 0 0 chr13 93305570 93305656 -26978656 + (TTGG)n Simple_repeat Simple_repeat 2 87 0 5 1296 732 165 104 15 chr13 93305664 93305799 -26978513 - B1_Mus1 SINE Alu 0 148 2 5 1296 2380 270 93 29 chr13 93305894 93306714 -26977598 - Lx8 LINE L1 0 7473 6602 5 1296 431 276 66 49 chr13 93306790 93307076 -26977236 - L1MA4 LINE L1 -257 6043 5753 5 1296 23 33 0 0 chr13 93307079 93307109 -26977203 + AT_rich Low_complexity Low_complexity 1 30 0 5 1296 529 333 46 7 chr13 93307118 93307269 -26977043 - RSINE1 SINE B4 0 165 9 5 1296 4058 141 29 3 chr13 93307431 93308052 -26976260 + RLTR17 LTR ERVK 1 637 -55 5 1296 1638 213 55 27 chr13 93308223 93308590 -26975722 - MTEb LTR MaLR -2 377 1 5 1296 186 323 71 71 chr13 93309171 93309311 -26975001 + L2 LINE L2 2225 2364 -1055 5 1296 328 25 0 0 chr13 93310475 93310515 -26973797 + B2_Mm2 SINE B2 2 41 -154 5 1296 1009 55 0 0 chr13 93310517 93310644 -26973668 + B1_Mus1 SINE Alu 2 128 -20 5 1296 975 138 0 51 chr13 93310647 93310823 -26973489 + B2_Mm2 SINE B2 27 193 -2 5 1296 181 384 90 0 chr13 93311388 93311521 -26972791 + L2 LINE L2 2656 2800 -619 5 1296 2935 47 0 6 chr13 93311864 93312210 -26972102 - L1Md_F2 LINE L1 -6 6576 6233 5 1296 315 71 0 0 chr13 93312211 93312253 -26972059 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1296 716 292 0 0 chr13 93312253 93312407 -26971905 - B3A SINE B2 -44 154 1 5 1296 255 250 141 0 chr13 93312764 93312828 -26971484 + ID4 SINE ID 8 80 -3 5 1296 674 180 0 23 chr13 93313096 93313227 -26971085 + B1_Mus1 SINE Alu 9 136 -12 5 1296 531 0 0 0 chr13 93313227 93313286 -26971026 + (CAAAA)n Simple_repeat Simple_repeat 5 63 0 5 1296 32 26 0 0 chr13 93313551 93313590 -26970722 + AT_rich Low_complexity Low_complexity 1 39 0 5 1296 762 231 64 5 chr13 93313694 93313881 -26970431 - B3A SINE B2 0 198 1 5 1296 1456 245 163 49 chr13 93313928 93314418 -26969894 + RLTR20B3 LTR ERVK 5 550 -27 5 1296 2158 102 65 10 chr13 93314441 93314748 -26969564 + ORR1A3 LTR MaLR 3 326 0 5 1296 692 224 30 7 chr13 93314953 93315088 -26969224 + B1F SINE Alu 5 142 -7 5 1296 1409 75 40 0 chr13 93315100 93315273 -26969039 + B2_Mm2 SINE B2 2 181 -14 5 1296 379 33 66 0 chr13 93315312 93315373 -26968939 + B2_Mm1a SINE B2 127 191 -2 5 1296 799 170 13 64 chr13 93315506 93315521 -26968791 + B1_Mur2 SINE Alu 1 15 -134 5 1296 4423 46 2 19 chr13 93315521 93316033 -26968279 - RLTR1C LTR ERV1 0 503 1 5 1296 799 170 13 64 chr13 93316033 93316174 -26968138 + B1_Mur2 SINE Alu 16 149 0 5 1296 328 289 50 118 chr13 93316174 93316194 -26968118 + B4A SINE B4 97 246 -46 5 1296 2996 82 0 2 chr13 93316553 93316955 -26967357 - MTB_Mm LTR MaLR 0 407 7 5 1296 233 270 75 65 chr13 93317161 93317268 -26967044 + RMER20B LTR ERVK 479 586 -41 5 1296 406 247 0 43 chr13 93317354 93317447 -26966865 - B3A SINE B2 -43 155 67 5 1296 1625 150 103 20 chr13 93317451 93317743 -26966569 + MTC LTR MaLR 1 316 -105 5 1296 1761 236 51 54 chr13 93317752 93318322 -26965990 - RLTR20D LTR ERVK 0 568 1 5 1296 441 135 78 14 chr13 93318322 93318416 -26965896 + MTC LTR MaLR 278 421 0 5 1296 302 220 0 0 chr13 93318416 93318475 -26965837 - B2_Mm2 SINE B2 -128 67 9 5 1296 325 87 33 44 chr13 93318484 93318575 -26965737 - B2_Mm2 SINE B2 -7 188 47 5 1296 1138 120 12 0 chr13 93318598 93318765 -26965547 - B2_Mm1t SINE B2 -23 170 2 5 1296 3386 42 31 3 chr13 93319210 93319595 -26964717 - MTA_Mm LTR MaLR 0 396 1 5 1296 603 206 82 41 chr13 93319667 93319814 -26964498 - MTEb LTR MaLR 0 379 227 5 1296 1094 279 53 20 chr13 93319816 93320116 -26964196 + Lx7 LINE L1 6515 6824 -872 5 1296 316 350 76 49 chr13 93320343 93320607 -26963705 + RLTR41 LTR ERV1 176 446 0 5 1296 446 305 0 7 chr13 93321187 93321329 -26962983 + RLTR4_MM-int LTR ERV1 418 558 -4505 5 1296 711 258 8 0 chr13 93321376 93321508 -26962804 + ETnERV2-int LTR ERVK 7070 7202 -204 5 1296 440 225 48 27 chr13 93322324 93322470 -26961842 + RLTR4_MM-int LTR ERV1 1283 1431 -6347 5 20 4954 323 44 38 chr13 93322526 93325295 -26959017 + RLTR4_MM-int LTR ERV1 1380 4166 -3435 5 1297 242 311 91 36 chr13 93325357 93325467 -26958845 + RLTR41 LTR ERV1 331 446 0 5 1297 2004 229 131 5 chr13 93325474 93326039 -26958273 + Lx7 LINE L1 6829 7464 -232 5 1297 821 84 0 8 chr13 93326041 93326161 -26958151 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 5 1297 273 244 64 0 chr13 93326167 93326245 -26958067 + Lx7 LINE L1 7602 7684 -12 5 1297 246 287 59 0 chr13 93326245 93326363 -26957949 - MTEb LTR MaLR -297 124 1 5 1297 333 68 0 0 chr13 93326600 93326644 -26957668 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1297 399 56 0 0 chr13 93327272 93327326 -26956986 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1297 618 291 7 13 chr13 93327331 93327481 -26956831 - RSINE1 SINE B4 -15 150 2 5 1297 341 283 108 36 chr13 93327963 93328157 -26956155 + L2 LINE L2 2437 2644 -775 5 1297 510 70 0 0 chr13 93328466 93328537 -26955775 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 5 1297 267 93 0 0 chr13 93328544 93328587 -26955725 + (TCTCTG)n Simple_repeat Simple_repeat 2 44 0 5 1297 3359 29 50 0 chr13 93328708 93329085 -26955227 + MTA_Mm LTR MaLR 1 396 0 5 1297 235 360 90 0 chr13 93329834 93329945 -26954367 - MIRb SINE MIR -81 187 67 5 1297 701 192 83 0 chr13 93330042 93330198 -26954114 + BGLII_B LTR ERVK 1 169 -272 5 1297 1330 229 75 102 chr13 93330202 93330693 -26953619 + RLTR11A LTR ERVK 51 528 0 5 1297 243 303 0 15 chr13 93330769 93330835 -26953477 + B3A SINE B2 32 96 -102 5 1297 583 148 14 116 chr13 93330835 93330973 -26953339 + B2_Mm2 SINE B2 2 125 -70 5 1297 986 121 0 12 chr13 93330985 93331152 -26953160 + (GAAA)n Simple_repeat Simple_repeat 4 168 0 5 1297 289 294 69 23 chr13 93331210 93331297 -26953015 + B3A SINE B2 106 196 -2 5 1297 26 50 0 0 chr13 93332319 93332359 -26951953 + AT_rich Low_complexity Low_complexity 1 40 0 5 1297 2969 94 52 0 chr13 93332753 93333158 -26951154 - L1_Mus2 LINE L1 -2 6564 6139 5 1297 1358 133 216 23 chr13 93333469 93333817 -26950495 + MTB_Mm LTR MaLR 7 421 0 5 1297 407 240 10 0 chr13 93333915 93334015 -26950297 - L1M3 LINE L1 -459 5730 5630 5 1297 325 289 54 34 chr13 93334048 93334195 -26950117 - RMER15 LTR ERVL -18 557 408 5 1297 290 225 24 36 chr13 93334196 93334279 -26950033 + MTD LTR MaLR 330 411 -8 5 1297 565 40 0 0 chr13 93334282 93334358 -26949954 + B1_Mm SINE Alu 72 147 0 5 1297 438 216 62 39 chr13 93334878 93335008 -26949304 + Lx4B LINE L1 6926 7058 0 5 1297 651 133 0 0 chr13 93335008 93335113 -26949199 + (GAAA)n Simple_repeat Simple_repeat 3 107 0 5 1297 3354 235 80 67 chr13 93335113 93336075 -26948237 + Lx6 LINE L1 6480 7454 -6 5 1297 1141 235 8 4 chr13 93336084 93336319 -26947993 + B4A SINE B4 1 236 -56 5 1297 262 250 199 46 chr13 93336472 93336623 -26947689 - L1MC LINE L1 -2224 5658 5485 5 1297 673 302 80 22 chr13 93336768 93337042 -26947270 + B4A SINE B4 3 292 0 5 1297 302 235 68 34 chr13 93337146 93337234 -26947078 - B4 SINE B4 -1 291 201 5 1297 3520 216 92 22 chr13 93337255 93338449 -26945863 + RMER12 LTR ERVK 1 1805 -43 5 1297 702 265 99 45 chr13 93338587 93338990 -26945322 - RMER13A LTR ERVK -323 585 127 5 1297 510 262 148 12 chr13 93339097 93339259 -26945053 - B4 SINE B4 -85 207 24 5 1297 1068 103 0 0 chr13 93339267 93339423 -26944889 + (TTCC)n Simple_repeat Simple_repeat 4 159 0 5 1297 195 146 0 0 chr13 93339423 93339464 -26944848 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 5 1297 1689 186 92 44 chr13 93339717 93340151 -26944161 - RLTR40 LTR ERVK -6 811 357 5 1297 218 224 61 0 chr13 93340217 93340266 -26944046 - MIRc SINE MIR -140 128 77 5 1297 228 67 0 0 chr13 93340531 93340561 -26943751 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 5 1297 422 254 27 0 chr13 93340561 93340671 -26943641 - B1F SINE Alu 0 149 37 5 1297 2784 104 54 0 chr13 93340972 93341358 -26942954 - MTB_Mm LTR MaLR 0 407 1 5 1297 239 246 66 0 chr13 93341427 93341488 -26942824 + BC1_Mm scRNA scRNA 17 81 -71 5 1297 213 39 0 0 chr13 93341619 93341645 -26942667 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 5 1297 297 266 0 105 chr13 93341662 93341767 -26942545 - ID_B1 SINE B4 -16 208 115 5 1297 275 265 126 79 chr13 93341767 93341789 -26942523 - B1F2 SINE Alu -16 133 1 5 1297 24 32 0 0 chr13 93341845 93341876 -26942436 + AT_rich Low_complexity Low_complexity 1 31 0 5 1297 593 156 230 148 chr13 93342040 93342236 -26942076 - B3 SINE B2 0 216 5 6 1297 3121 85 5 0 chr13 93342237 93342674 -26941638 + MT2B2 LTR ERVL 1 439 -145 6 1297 495 48 0 0 chr13 93342674 93342736 -26941576 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 6 1297 2443 102 143 33 chr13 93342736 93343162 -26941150 + IAPLTR2_Mm LTR ERVK 2 474 -1 6 1297 411 21 0 0 chr13 93343162 93343210 -26941102 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 6 1297 352 211 21 14 chr13 93343213 93343357 -26940955 + (TA)n Simple_repeat Simple_repeat 2 146 0 6 1297 594 0 0 0 chr13 93346373 93346439 -26937873 + (CACAC)n Simple_repeat Simple_repeat 4 69 0 6 1297 2180 172 3 11 chr13 93346581 93346962 -26937350 + ORR1C1 LTR MaLR 1 378 0 6 1297 228 189 0 0 chr13 93347098 93347172 -26937140 + CT-rich Low_complexity Low_complexity 1 74 0 6 1297 356 59 20 0 chr13 93347429 93347480 -26936832 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 1297 181 256 0 0 chr13 93347536 93347575 -26936737 + MIRc SINE MIR 35 73 -195 6 1297 288 205 56 67 chr13 93347631 93347720 -26936592 + B4A SINE B4 188 275 -17 6 1297 405 109 0 0 chr13 93347734 93347798 -26936514 + (CA)n Simple_repeat Simple_repeat 1 64 0 6 1297 1259 130 16 0 chr13 93347895 93348079 -26936233 + B2_Mm2 SINE B2 3 189 -6 6 1297 254 245 42 0 chr13 93348809 93348889 -26935423 - L1MC4a LINE L1 -377 7505 7432 6 1297 396 278 91 1 chr13 93348927 93349108 -26935204 - L1MC4a LINE L1 -674 7368 7150 6 1297 932 269 28 24 chr13 93349246 93349535 -26934777 + B4A SINE B4 3 292 0 6 1297 725 224 112 25 chr13 93349661 93349858 -26934454 - B3 SINE B2 0 216 3 6 1297 181 0 33 33 chr13 93349960 93349990 -26934322 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 6 1297 557 243 12 144 chr13 93350002 93350175 -26934137 - B3A SINE B2 -48 150 1 6 1297 26 0 0 0 chr13 93350273 93350299 -26934013 + AT_rich Low_complexity Low_complexity 1 26 0 6 1297 346 267 244 0 chr13 93350948 93351079 -26933233 + RSINE1 SINE B4 3 165 0 6 1297 1191 42 0 0 chr13 93351888 93352030 -26932282 + B1_Mm SINE Alu 1 142 -5 6 1297 233 125 0 18 chr13 93352032 93352089 -26932223 + (CAAAAA)n Simple_repeat Simple_repeat 5 60 0 6 1297 787 133 14 20 chr13 93352174 93352320 -26931992 + B1_Mur4 SINE Alu 6 150 0 6 1297 285 211 0 0 chr13 93352321 93352378 -26931934 + A-rich Low_complexity Low_complexity 1 57 0 6 1297 4565 8 0 0 chr13 93352409 93352902 -26931410 - MT2_Mm LTR ERVL 0 493 1 6 1297 276 200 271 0 chr13 93352989 93353059 -26931253 - PB1D10 SINE Alu -12 105 17 6 1297 540 266 0 0 chr13 93353280 93353389 -26930923 + PB1D7 SINE Alu 3 111 -9 6 1297 253 196 54 0 chr13 93353392 93353448 -26930864 + GA-rich Low_complexity Low_complexity 2 60 0 6 1297 279 0 0 0 chr13 93353941 93353972 -26930340 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1297 180 0 0 0 chr13 93354422 93354442 -26929870 + (TG)n Simple_repeat Simple_repeat 1 20 0 6 1297 279 0 0 0 chr13 93354444 93354475 -26929837 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1297 636 236 135 45 chr13 93354564 93354764 -26929548 - ID_B1 SINE B4 -2 222 5 6 1297 600 258 11 132 chr13 93354813 93354987 -26929325 + RSINE1 SINE B4 9 161 -4 6 1297 831 192 7 0 chr13 93355133 93355279 -26929033 - ID_B1 SINE B4 0 224 78 6 1297 2140 144 64 11 chr13 93355396 93355788 -26928524 - MTC LTR MaLR -21 400 1 6 1297 1994 86 62 3 chr13 93355803 93356095 -26928217 + RLTR27 LTR ERVK 1 309 0 6 1297 1076 238 43 110 chr13 93356101 93356686 -26927626 + RLTR20B3 LTR ERVK 23 528 0 6 1297 4537 175 78 26 chr13 93356687 93356877 -26927435 - MTC-int LTR MaLR -4 1254 1051 6 1297 553 116 0 132 chr13 93356877 93357006 -26927306 + PB1D9 SINE Alu 4 115 -5 6 1297 4537 175 78 26 chr13 93357006 93357872 -26926440 - MTC-int LTR MaLR -208 1050 144 6 1297 468 0 0 0 chr13 93357934 93357986 -26926326 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1297 249 250 0 59 chr13 93357996 93358064 -26926248 - L1MA5 LINE L1 -364 5936 5873 6 1297 376 258 75 0 chr13 93358518 93358611 -26925701 - ID_B1 SINE B4 -8 216 117 6 1297 310 231 0 13 chr13 93358901 93358980 -26925332 + (TG)n Simple_repeat Simple_repeat 1 78 0 6 1297 396 239 0 32 chr13 93358982 93359168 -26925144 + (TATG)n Simple_repeat Simple_repeat 1 180 0 6 1297 638 302 112 34 chr13 93359811 93360398 -26923914 - Charlie2a DNA MER1_type -1168 1693 1061 6 1297 210 37 0 0 chr13 93360406 93360433 -26923879 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1297 488 207 117 68 chr13 93360481 93360745 -26923567 - B4A SINE B4 -14 278 2 6 1297 391 251 42 74 chr13 93360783 93360972 -26923340 + B3A SINE B2 9 198 0 6 1297 323 260 126 0 chr13 93361145 93361272 -26923040 - Kanga1a DNA Tc2 -8 746 604 6 1297 690 294 4 60 chr13 93361541 93361776 -26922536 - ID_B1 SINE B4 0 224 3 6 1297 849 159 35 0 chr13 93361961 93362106 -26922206 + B1_Mur4 SINE Alu 1 150 0 6 1297 222 116 0 0 chr13 93362106 93362149 -26922163 + (A)n Simple_repeat Simple_repeat 1 43 0 6 1297 468 0 0 0 chr13 93362151 93362203 -26922109 + (GAA)n Simple_repeat Simple_repeat 2 53 0 6 1297 411 73 0 0 chr13 93362499 93362554 -26921758 + (A)n Simple_repeat Simple_repeat 1 55 0 6 1297 378 264 0 0 chr13 93363679 93363751 -26920561 - ID SINE ID -152 72 1 6 1297 3206 148 68 24 chr13 93365179 93365726 -26918586 - RMER1A Other Other -17 1013 443 6 1297 293 330 57 15 chr13 93366240 93366414 -26917898 + RSINE1 SINE B4 87 281 -11 6 1297 243 0 0 0 chr13 93366425 93366452 -26917860 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1297 372 295 67 59 chr13 93367866 93367985 -26916327 - B1F SINE Alu -14 135 16 6 1297 631 54 17 43 chr13 93368012 93368128 -26916184 + (TTTC)n Simple_repeat Simple_repeat 4 116 0 6 1297 338 171 14 0 chr13 93368121 93368191 -26916121 + CT-rich Low_complexity Low_complexity 2 72 0 6 1297 753 182 8 0 chr13 93368197 93368323 -26915989 - B1_Mur1 SINE Alu -22 127 1 6 1297 2099 183 50 15 chr13 93368366 93368770 -26915542 - MTD LTR MaLR -1 418 1 6 1297 734 171 80 6 chr13 93368775 93368951 -26915361 - MTD-int LTR MaLR -2 1256 1068 6 1297 39360 5 0 0 chr13 93368952 93374363 -26909949 + L1Md_A LINE L1 175 5586 -297 6 1297 9222 2 0 0 chr13 93374363 93375359 -26908953 + L1Md_A LINE L1 5587 6582 0 6 1297 1042 60 40 0 chr13 93375372 93375523 -26908789 + B2_Mm2 SINE B2 2 158 -37 6 1297 243 0 0 0 chr13 93375524 93375551 -26908761 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 6 1297 1053 231 38 54 chr13 93375730 93376045 -26908267 - MTD-int LTR MaLR -948 310 1 6 1297 1288 229 64 23 chr13 93376071 93376416 -26907896 - MTD LTR MaLR -36 383 25 6 1297 197 83 0 27 chr13 93376421 93376458 -26907854 + (CAAAAA)n Simple_repeat Simple_repeat 4 39 0 6 1297 227 333 0 13 chr13 93376536 93376612 -26907700 + ID2 SINE ID 1 75 -8 6 1297 399 191 79 35 chr13 93376784 93376898 -26907414 + PB1D9 SINE Alu 2 120 0 6 1297 189 0 0 0 chr13 93376930 93376951 -26907361 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1297 22 35 0 0 chr13 93377049 93377078 -26907234 + AT_rich Low_complexity Low_complexity 1 29 0 6 1297 27 0 0 0 chr13 93377279 93377306 -26907006 + AT_rich Low_complexity Low_complexity 1 27 0 6 1297 645 281 102 21 chr13 93378031 93378412 -26905900 - RMER5 LTR ERV1 -16 518 107 6 1297 1844 214 30 70 chr13 93378423 93379030 -26905282 + RLTR1D LTR ERV1 59 611 -13 6 1297 369 0 0 0 chr13 93382363 93382404 -26901908 + (TC)n Simple_repeat Simple_repeat 2 42 0 6 1297 234 300 29 0 chr13 93382841 93382911 -26901401 + ID4_ SINE ID 2 73 -10 6 1297 213 321 37 0 chr13 93382911 93382922 -26901390 + ID SINE ID 2 85 -139 6 1297 225 0 0 0 chr13 93383505 93383530 -26900782 + (CTG)n Simple_repeat Simple_repeat 1 25 0 6 1297 552 30 0 0 chr13 93383530 93383596 -26900716 + (TTC)n Simple_repeat Simple_repeat 2 67 0 6 1297 1533 40 0 0 chr13 93383597 93383774 -26900538 - B2_Mm1a SINE B2 -14 179 3 6 1297 783 83 0 0 chr13 93383774 93383882 -26900430 + (TCC)n Simple_repeat Simple_repeat 3 110 0 6 1297 1120 61 7 7 chr13 93383892 93384040 -26900272 - B1_Mus1 SINE Alu 0 148 1 6 1297 914 162 18 96 chr13 93384285 93384503 -26899809 + URR1B DNA MER1_type 1 201 -24 6 1297 367 320 29 0 chr13 93384712 93384815 -26899497 - PB1D10 SINE Alu -1 116 11 6 1297 375 277 8 43 chr13 93385021 93385138 -26899174 - B3 SINE B2 0 216 104 6 1297 399 288 24 0 chr13 93385204 93385329 -26898983 - B3 SINE B2 -88 128 1 6 1297 587 205 26 0 chr13 93385592 93385709 -26898603 - PB1D9 SINE Alu 0 120 1 6 1297 222 264 152 11 chr13 93385931 93386023 -26898289 + MIRb SINE MIR 90 194 -74 6 1297 198 0 0 0 chr13 93386037 93386059 -26898253 + (TA)n Simple_repeat Simple_repeat 2 23 0 6 1297 279 0 0 0 chr13 93386059 93386090 -26898222 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1297 760 152 24 6 chr13 93386090 93386256 -26898056 + (TA)n Simple_repeat Simple_repeat 2 170 0 6 1297 252 77 0 0 chr13 93386774 93386813 -26897499 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1297 394 35 18 0 chr13 93386818 93386875 -26897437 - B1_Mm SINE Alu 0 147 90 6 1297 3645 46 5 2 chr13 93386879 93387314 -26896998 - RLTR10C LTR ERVK 0 436 1 6 1297 69194 8 0 7 chr13 93387314 93394910 -26889402 - MMERVK10C-int LTR ERVK 0 7581 35 6 1297 741 111 31 23 chr13 93394910 93394944 -26889368 - B1_Mus1 SINE Alu -17 131 96 6 1297 3655 46 5 2 chr13 93394944 93395379 -26888933 - RLTR10C LTR ERVK 0 436 1 6 1297 741 111 31 23 chr13 93395379 93395473 -26888839 - B1_Mus1 SINE Alu -53 95 2 6 1297 285 322 25 25 chr13 93395467 93395588 -26888724 - LTR82B Low_complexity ERVL -246 584 464 6 1297 377 295 6 77 chr13 93395473 93395548 -26888764 - MT2B LTR ERVL -352 249 93 6 1297 438 248 109 37 chr13 93395748 93395904 -26888408 - ID_B1 SINE B4 -46 246 77 6 1297 180 0 0 0 chr13 93395905 93395925 -26888387 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 7 1297 374 255 57 38 chr13 93395925 93396031 -26888281 - PB1D9 SINE Alu -11 109 2 7 1297 226 289 38 38 chr13 93396039 93396118 -26888194 - LTR82B Low_complexity ERVL -520 310 232 7 1297 280 300 14 0 chr13 93396058 93396128 -26888184 - LTR82A LTR ERVL -601 271 201 7 1297 261 0 0 0 chr13 93396153 93396182 -26888130 + (CCA)n Simple_repeat Simple_repeat 3 31 0 7 1297 346 171 133 22 chr13 93396278 93396368 -26887944 - PB1D10 SINE Alu -7 110 11 7 1297 235 224 29 43 chr13 93396322 93396392 -26887920 - B4A SINE B4 -149 143 75 7 1297 255 304 132 20 chr13 93396378 93396529 -26887783 - MER67B LTR ERV1 -118 543 376 7 1297 23 33 0 0 chr13 93396954 93396984 -26887328 + AT_rich Low_complexity Low_complexity 1 30 0 7 1297 387 248 83 45 chr13 93396992 93397148 -26887164 - RSINE1 SINE B4 0 165 4 7 1297 775 121 0 8 chr13 93397209 93397326 -26886986 - B1_Mus2 SINE Alu -3 144 29 7 1297 255 182 171 57 chr13 93397390 93397495 -26886817 - MER2 DNA MER2_type -98 247 131 7 1297 679 231 24 30 chr13 93397495 93397680 -26886632 + B3 SINE B2 8 195 0 7 1297 788 191 13 20 chr13 93397712 93397723 -26886589 - B1_Mur4 SINE Alu 0 150 142 7 1297 222 37 0 0 chr13 93397723 93397750 -26886562 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1297 788 191 13 20 chr13 93397750 93397888 -26886424 - B1_Mur4 SINE Alu -9 141 2 7 1297 247 329 14 0 chr13 93397890 93397963 -26886349 - ID4_ SINE ID -2 81 8 7 1297 408 196 52 0 chr13 93397975 93398071 -26886241 - PB1D10 SINE Alu -7 110 3 7 1297 290 325 89 57 chr13 93398520 93398596 -26885716 + B3 SINE B2 80 161 -55 7 1297 528 59 0 0 chr13 93398596 93398664 -26885648 + (CA)n Simple_repeat Simple_repeat 2 69 0 7 1297 290 325 89 57 chr13 93398664 93398711 -26885601 + B3 SINE B2 162 207 -9 7 1297 261 180 0 0 chr13 93399211 93399261 -26885051 + (TA)n Simple_repeat Simple_repeat 2 51 0 7 1297 405 169 0 0 chr13 93400041 93400124 -26884188 + (CA)n Simple_repeat Simple_repeat 2 84 0 7 1297 2169 113 83 54 chr13 93400154 93400527 -26883785 + ORR1C2 LTR MaLR 1 384 0 7 1297 350 298 21 0 chr13 93400527 93400613 -26883699 - B1F SINE Alu -43 106 19 7 1297 435 301 7 49 chr13 93400613 93400626 -26883686 - ID_B1 SINE B4 0 224 161 7 1297 542 235 25 25 chr13 93400626 93400744 -26883568 - B1F SINE Alu -13 136 19 7 1297 435 301 7 49 chr13 93400744 93400756 -26883556 - ID_B1 SINE B4 0 160 88 7 1297 22 88 0 0 chr13 93401002 93401059 -26883253 + AT_rich Low_complexity Low_complexity 1 57 0 7 1297 509 282 0 8 chr13 93402125 93402243 -26882069 + RSINE1 SINE B4 43 159 -6 7 1297 390 256 37 0 chr13 93402385 93402467 -26881845 - B1F SINE Alu -32 117 33 7 1297 503 259 43 7 chr13 93402960 93403100 -26881212 + B3A SINE B2 1 145 -53 7 1297 372 288 0 46 chr13 93403893 93404002 -26880310 + B4A SINE B4 189 292 0 7 1297 242 195 11 0 chr13 93404002 93404089 -26880223 + (CA)n Simple_repeat Simple_repeat 1 88 0 7 1297 986 258 0 14 chr13 93404335 93404547 -26879765 + B3 SINE B2 1 209 -7 7 1297 584 279 39 43 chr13 93404555 93404787 -26879525 - Tigger9b DNA MER2_type -147 477 247 7 1297 184 254 169 31 chr13 93404867 93404932 -26879380 - L4 LINE RTE -958 1071 998 7 1297 2199 172 147 27 chr13 93405350 93405449 -26878863 - RMER5 LTR ERV1 0 534 430 7 1297 1577 209 29 40 chr13 93405449 93405827 -26878485 + ORR1D1 LTR MaLR 1 374 0 7 1297 2199 172 147 27 chr13 93405827 93406204 -26878108 - RMER5 LTR ERV1 -105 429 1 7 1297 463 227 31 36 chr13 93407359 93407492 -26876820 + B1F2 SINE Alu 12 143 -6 7 1297 201 62 94 0 chr13 93407584 93407616 -26876696 + (CATATA)n Simple_repeat Simple_repeat 5 39 0 7 1297 739 240 148 6 chr13 93407845 93408021 -26876291 - B3 SINE B2 -9 207 7 7 1297 473 286 106 20 chr13 93408299 93408584 -26875728 + L1MB3 LINE L1 5828 6145 -38 7 1297 571 189 163 8 chr13 93409948 93410071 -26874241 - B1_Mur2 SINE Alu -1 148 7 7 1297 23 0 0 0 chr13 93410074 93410097 -26874215 + AT_rich Low_complexity Low_complexity 1 23 0 7 1297 285 89 0 0 chr13 93410101 93410146 -26874166 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 7 1297 334 305 102 57 chr13 93410153 93410179 -26874133 - B3 SINE B2 -13 203 184 7 1297 930 201 250 18 chr13 93410179 93410519 -26873793 + MTD LTR MaLR 1 419 0 7 1297 419 294 89 25 chr13 93410519 93410669 -26873643 - B3A SINE B2 -33 183 19 7 1297 185 65 0 31 chr13 93411271 93411303 -26873009 + (GGGTG)n Simple_repeat Simple_repeat 4 34 0 7 1297 282 29 0 0 chr13 93411357 93411392 -26872920 + (TATG)n Simple_repeat Simple_repeat 1 35 0 7 1297 243 297 109 11 chr13 93411706 93411798 -26872514 - Charlie22a DNA MER1_type -256 235 135 7 1297 261 140 0 0 chr13 93411831 93411888 -26872424 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1297 321 100 0 0 chr13 93411879 93411929 -26872383 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 1297 189 0 0 0 chr13 93411929 93411950 -26872362 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 1297 368 242 46 46 chr13 93411950 93412080 -26872232 - MER74A LTR ERVL -5 553 424 7 1297 368 224 9 20 chr13 93412217 93412875 -26871437 + GA-rich Low_complexity Low_complexity 1 650 0 7 1297 325 227 0 17 chr13 93412922 93413101 -26871211 + GA-rich Low_complexity Low_complexity 4 179 0 7 1297 395 325 71 6 chr13 93413110 93413280 -26871032 - MER74A LTR ERVL -355 203 23 7 1297 335 247 13 13 chr13 93413916 93413994 -26870318 + ID4_ SINE ID 3 80 -3 7 1297 1595 57 0 0 chr13 93414069 93414262 -26870050 + B2_Mm1a SINE B2 1 193 0 7 1297 229 262 95 32 chr13 93415518 93415581 -26868731 - ID2 SINE ID -11 72 6 7 1297 323 284 70 99 chr13 93416724 93416896 -26867416 + ID_B1 SINE B4 49 215 -9 7 1297 205 256 0 0 chr13 93417556 93417595 -26866717 + L2c LINE L2 3277 3315 -72 7 1297 246 264 42 120 chr13 93418490 93418632 -26865680 + MER20 DNA MER1_type 51 181 -38 7 1297 637 229 82 15 chr13 93418768 93418963 -26865349 - Tigger7 DNA MER2_type -6 2485 2278 7 1297 180 225 139 14 chr13 93419027 93419099 -26865213 - L2 LINE L2 -567 2852 2772 7 1297 300 111 0 0 chr13 93419613 93419658 -26864654 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 7 1297 269 129 97 0 chr13 93419755 93419817 -26864495 - L1MB2 LINE L1 0 6171 6104 7 1297 275 248 160 47 chr13 93420384 93420490 -26863822 - PB1D7 SINE Alu -1 119 2 7 1297 220 259 148 0 chr13 93420987 93421068 -26863244 + MIRb SINE MIR 42 134 -134 7 1297 369 235 48 9 chr13 93423547 93423879 -26860433 + GA-rich Low_complexity Low_complexity 1 345 0 7 1297 389 214 21 89 chr13 93423896 93424179 -26860133 + GA-rich Low_complexity Low_complexity 1 263 0 7 1297 383 230 37 37 chr13 93424200 93424556 -26859756 + GA-rich Low_complexity Low_complexity 1 356 0 7 1297 328 341 0 38 chr13 93424471 93424654 -26859658 + G-rich Low_complexity Low_complexity 5 180 0 7 1297 457 286 11 39 chr13 93424671 93424853 -26859459 + GA-rich Low_complexity Low_complexity 3 179 0 7 1297 463 310 6 28 chr13 93424919 93425147 -26859165 + GA-rich Low_complexity Low_complexity 1 222 0 7 1297 183 264 0 0 chr13 93425278 93425331 -26858981 + CT-rich Low_complexity Low_complexity 10 62 0 7 1297 385 251 93 68 chr13 93425693 93425974 -26858338 - MLT1B LTR MaLR -15 452 16 7 1297 1519 143 98 27 chr13 93426184 93426521 -26857791 + Lx9 LINE L1 7283 7643 -1 7 1297 309 267 32 53 chr13 93426761 93426856 -26857456 - L1MC1 LINE L1 -18 6315 6223 7 1297 248 211 35 0 chr13 93427054 93427111 -26857201 - L1MC1 LINE L1 -183 6150 6092 7 1297 1212 192 23 9 chr13 93428077 93428293 -26856019 + URR1B DNA MER1_type 7 225 0 7 1297 595 308 114 8 chr13 93429513 93429768 -26854544 + B4A SINE B4 1 282 -10 7 1297 355 323 96 45 chr13 93430621 93430819 -26853493 - MER21B LTR ERV1 -553 310 103 7 1297 1547 189 36 101 chr13 93431220 93431608 -26852704 - ORR1D2 LTR MaLR -7 363 1 7 1297 740 319 67 53 chr13 93431761 93432046 -26852266 - B4A SINE B4 -3 289 1 7 1297 232 312 89 27 chr13 93432491 93432603 -26851709 - LTR79 LTR ERVL 0 527 409 7 1297 675 271 7 0 chr13 93433518 93433669 -26850643 + B3A SINE B2 2 153 -45 7 1297 43 64 0 0 chr13 93433675 93433753 -26850559 + AT_rich Low_complexity Low_complexity 1 78 0 7 1297 202 360 66 55 chr13 93434395 93434577 -26849735 - MIR SINE MIR -27 235 52 7 1297 492 18 0 0 chr13 93435745 93435802 -26848510 + (TC)n Simple_repeat Simple_repeat 1 57 0 7 1297 973 69 39 0 chr13 93435802 93435932 -26848380 - B1_Mus1 SINE Alu -12 136 2 7 1297 241 361 146 29 chr13 93437964 93438101 -26846211 + MIR SINE MIR 2 154 -108 7 1297 198 290 128 20 chr13 93438177 93438279 -26846033 + MIR SINE MIR 119 231 -31 7 1297 560 274 14 63 chr13 93438383 93438591 -26845721 - L1MB8 LINE L1 -90 6088 5888 7 1297 333 307 92 106 chr13 93438634 93438926 -26845386 + MLT1A LTR MaLR 82 369 -5 7 1297 746 248 106 137 chr13 93438926 93439231 -26845081 - L1MB5 LINE L1 -270 5904 5607 7 1297 2802 42 72 3 chr13 93439231 93439592 -26844720 - L1Md_F3 LINE L1 0 6584 6199 7 1297 746 248 106 137 chr13 93439592 93439767 -26844545 - L1MB5 LINE L1 -568 5606 5439 7 1297 262 254 8 0 chr13 93439777 93439792 -26844520 + ORR1B1-int LTR MaLR 632 647 -862 7 1297 1174 34 0 0 chr13 93439792 93439938 -26844374 + B1_Mus2 SINE Alu 1 146 -1 7 1297 3397 120 62 15 chr13 93439936 93440471 -26843841 - MT2B LTR ERVL -39 562 3 7 1297 189 0 0 0 chr13 93440778 93440799 -26843513 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 7 1297 1091 90 0 0 chr13 93440799 93440944 -26843368 - B1_Mus1 SINE Alu -3 145 1 7 1297 243 247 131 45 chr13 93441363 93441492 -26842820 - MIR3 SINE MIR -23 185 44 7 1297 786 240 249 0 chr13 93442937 93443166 -26841146 + Tigger7 DNA MER2_type 30 315 -2176 7 1297 342 254 0 27 chr13 93443171 93443244 -26841068 - ID4_ SINE ID -1 82 12 7 1297 193 182 36 0 chr13 93443255 93443310 -26841002 + CT-rich Low_complexity Low_complexity 2 58 0 7 1297 279 345 9 9 chr13 93443321 93443432 -26840880 - PB1D10 SINE Alu -6 111 1 7 1297 511 275 42 0 chr13 93443576 93443696 -26840616 - ID_B1 SINE B4 -4 220 96 8 1297 230 328 30 69 chr13 93443815 93443946 -26840366 - ID_B1 SINE B4 -8 216 91 8 1297 216 179 0 0 chr13 93443994 93444033 -26840279 + GA-rich Low_complexity Low_complexity 1 39 0 8 1297 238 326 51 43 chr13 93444049 93444187 -26840125 - B1F SINE Alu -6 143 5 8 1297 363 341 24 0 chr13 93445085 93445208 -26839104 - MER58A DNA MER1_type -90 134 9 8 1297 288 319 11 11 chr13 93445679 93445771 -26838541 + (CATATA)n Simple_repeat Simple_repeat 5 96 0 8 1297 271 304 29 0 chr13 93445855 93445924 -26838388 - ID SINE ID -146 78 8 8 1297 455 246 16 98 chr13 93446357 93446479 -26837833 - B1F2 SINE Alu -35 114 3 8 1297 2298 52 49 0 chr13 93447216 93447503 -26836809 - L1_Mus2 LINE L1 0 6566 6266 8 1297 372 65 0 0 chr13 93447503 93447549 -26836763 + L1_Mus2 LINE L1 6220 6265 -301 8 1297 200 301 27 0 chr13 93448126 93448199 -26836113 + (TATG)n Simple_repeat Simple_repeat 4 78 0 8 1297 711 65 0 0 chr13 93448202 93448295 -26836017 + (TG)n Simple_repeat Simple_repeat 2 94 0 8 1297 772 302 50 8 chr13 93448306 93448566 -26835746 - B4A SINE B4 -21 271 1 8 1297 267 54 0 0 chr13 93448626 93448663 -26835649 + (CTG)n Simple_repeat Simple_repeat 1 37 0 8 1297 255 319 0 0 chr13 93448786 93448858 -26835454 - ID4 SINE ID -10 73 2 8 1297 469 301 23 0 chr13 93448865 93448998 -26835314 - B1F SINE Alu -8 141 6 8 1297 209 235 20 0 chr13 93449911 93449962 -26834350 + GA-rich Low_complexity Low_complexity 2 53 0 8 1297 337 291 86 0 chr13 93450060 93450177 -26834135 + B1F SINE Alu 18 144 -5 8 1297 418 305 106 5 chr13 93450237 93450425 -26833887 + B3 SINE B2 2 208 -8 8 1297 258 194 16 31 chr13 93450630 93450694 -26833618 - MTEa LTR MaLR -33 346 284 8 1297 620 287 74 63 chr13 93450801 93451264 -26833048 + Lx7 LINE L1 6977 7471 -2 8 1297 222 227 15 29 chr13 93451859 93451927 -26832385 + CT-rich Low_complexity Low_complexity 3 69 0 8 1297 442 318 0 53 chr13 93451955 93452088 -26832224 - ID_B1 SINE B4 -97 127 2 8 1297 253 269 32 11 chr13 93452109 93452203 -26832109 + (TATATG)n Simple_repeat Simple_repeat 3 98 0 8 1297 557 235 30 0 chr13 93452426 93452558 -26831754 - B3 SINE B2 -77 139 4 8 1297 256 167 76 0 chr13 93453522 93453588 -26830724 + BC1_Mm scRNA scRNA 1 71 -81 8 1298 934 249 75 24 chr13 93454637 93454892 -26829420 - MTE2b LTR MaLR -84 295 28 8 1298 285 98 0 0 chr13 93455841 93455882 -26828430 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 8 1298 189 0 0 0 chr13 93455994 93456015 -26828297 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 8 1298 273 329 0 0 chr13 93456016 93456086 -26828226 - PB1D10 SINE Alu -29 88 19 8 1298 486 250 78 0 chr13 93456421 93456549 -26827763 + B3A SINE B2 1 138 -60 8 1298 231 36 0 0 chr13 93456578 93456606 -26827706 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1298 317 277 139 0 chr13 93456801 93456902 -26827410 - B4 SINE B4 -176 116 2 8 1298 4624 130 53 14 chr13 93456987 93457837 -26826475 - RLTR13D6 LTR ERVK -19 883 1 8 1298 760 193 86 6 chr13 93457837 93457987 -26826325 - B3A SINE B2 -35 163 1 8 1298 508 274 24 0 chr13 93459523 93459647 -26824665 + ID_B1 SINE B4 80 206 -18 8 1298 520 274 118 0 chr13 93460403 93460538 -26823774 + RSINE1 SINE B4 2 152 -13 8 1298 249 83 0 0 chr13 93460539 93460575 -26823737 + (CATG)n Simple_repeat Simple_repeat 3 38 0 8 1298 557 229 168 6 chr13 93461169 93461336 -26822976 - B3A SINE B2 -4 194 1 8 1298 673 203 35 48 chr13 93461824 93461969 -26822343 - B1_Mur1 SINE Alu -4 145 3 8 1298 575 261 43 0 chr13 93462227 93462365 -26821947 - B1F SINE Alu -5 144 1 8 1298 32 43 0 0 chr13 93462599 93462645 -26821667 + AT_rich Low_complexity Low_complexity 1 46 0 8 1298 857 289 57 8 chr13 93464582 93464847 -26819465 + B4A SINE B4 7 284 -8 8 1298 996 208 36 61 chr13 93464965 93465242 -26819070 + MTD LTR MaLR 3 272 -147 8 1298 461 192 28 28 chr13 93465318 93465425 -26818887 + B3 SINE B2 110 216 0 8 1298 804 187 120 21 chr13 93465526 93465717 -26818595 + B3 SINE B2 1 210 -6 8 1298 385 257 98 10 chr13 93465957 93466059 -26818253 + PB1 SINE Alu 1 111 -16 8 1298 285 292 21 44 chr13 93467513 93467644 -26816668 - MTEa LTR MaLR -5 374 234 8 1298 1218 225 133 11 chr13 93467644 93468004 -26816308 + MTD LTR MaLR 16 419 0 8 1298 1167 194 27 0 chr13 93468018 93468240 -26816072 - MTD LTR MaLR -57 362 135 8 1298 350 237 135 3 chr13 93468230 93468358 -26815954 - MTEa-int LTR MaLR -1359 150 1 8 1298 471 292 0 45 chr13 93469307 93469334 -26814978 + ID_B1 SINE B4 65 211 -13 8 1298 662 228 0 0 chr13 93469334 93469461 -26814851 + B1F1 SINE Alu 10 136 -13 8 1298 313 321 119 36 chr13 93469484 93469678 -26814634 + B4A SINE B4 8 217 -75 8 1298 213 81 0 51 chr13 93469751 93469790 -26814522 + (CAGAGA)n Simple_repeat Simple_repeat 6 42 0 8 1298 887 256 14 0 chr13 93470745 93470952 -26813360 - ID_B1 SINE B4 -8 216 7 8 1298 348 323 28 108 chr13 93471182 93471432 -26812880 - MER2 DNA MER2_type -3 342 113 8 1298 288 70 0 0 chr13 93471768 93471811 -26812501 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 8 1298 232 274 63 10 chr13 93471812 93471920 -26812392 - Lx7 LINE L1 0 7696 7595 8 1298 180 0 0 0 chr13 93471925 93471945 -26812367 + (TC)n Simple_repeat Simple_repeat 1 20 0 8 1298 546 63 0 0 chr13 93471945 93472023 -26812289 + (CA)n Simple_repeat Simple_repeat 1 79 0 8 1298 382 175 130 84 chr13 93472205 93472336 -26811976 - Lx7 LINE L1 -372 7324 7188 8 1298 440 155 5 53 chr13 93472961 93473067 -26811245 + B1_Mur4 SINE Alu 1 97 -52 8 1298 315 209 40 81 chr13 93474212 93474311 -26810001 - B1F SINE Alu 0 149 55 8 1298 1470 82 0 5 chr13 93474497 93474692 -26809620 - B2_Mm2 SINE B2 -1 194 1 8 1298 283 336 89 60 chr13 93474944 93475292 -26809020 - LTR16A LTR ERVL -78 373 16 8 1298 699 317 48 20 chr13 93477028 93477382 -26806930 + L1MB7 LINE L1 5467 5830 -354 8 1298 423 283 99 20 chr13 93477553 93477805 -26806507 + L1MB7 LINE L1 5826 6097 -81 8 1298 445 268 247 8 chr13 93482026 93482293 -26802019 - L1MA8 LINE L1 -11 6280 5950 8 1298 358 233 48 0 chr13 93482949 93483052 -26801260 - L1MA8 LINE L1 -423 5868 5761 8 1298 187 368 45 86 chr13 93483142 93483386 -26800926 + L2 LINE L2 2847 3080 -339 8 1298 1297 209 96 40 chr13 93483428 93483782 -26800530 - ORR1D1 LTR MaLR 0 374 1 8 1298 294 290 0 0 chr13 93484129 93484198 -26800114 + ID4 SINE ID 2 70 -13 8 1298 1160 181 24 5 chr13 93484255 93484460 -26799852 + B3 SINE B2 2 210 -6 8 1298 471 209 57 0 chr13 93484486 93484591 -26799721 + PB1D9 SINE Alu 10 120 0 8 1298 15956 154 16 6 chr13 93484591 93485486 -26798826 + L1_Mm LINE L1 1382 2308 -3575 8 1298 2811 79 50 8 chr13 93485486 93485870 -26798442 - MTB LTR MaLR 0 400 1 8 1298 15956 154 16 6 chr13 93485870 93487786 -26796526 + L1_Mm LINE L1 2309 4221 -1662 8 1298 282 300 64 0 chr13 93487963 93488073 -26796239 + PB1D10 SINE Alu 1 117 0 8 1298 1828 151 227 12 chr13 93488597 93488940 -26795372 + MTD LTR MaLR 3 419 0 8 1298 961 247 123 4 chr13 93491633 93491893 -26792419 - B4 SINE B4 0 292 2 8 1298 321 310 53 0 chr13 93491918 93492031 -26792281 + PB1D7 SINE Alu 2 120 0 8 1298 224 59 0 29 chr13 93492031 93492066 -26792246 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 8 1298 22 0 0 0 chr13 93492179 93492201 -26792111 + AT_rich Low_complexity Low_complexity 1 22 0 8 1298 877 224 102 5 chr13 93493153 93493350 -26790962 - B3 SINE B2 0 216 1 8 1298 240 100 0 0 chr13 93493381 93493421 -26790891 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1298 512 262 26 32 chr13 93493426 93493580 -26790732 - B3A SINE B2 -41 157 5 8 1298 237 65 0 0 chr13 93493714 93493745 -26790567 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 8 1298 784 239 130 53 chr13 93493937 93494259 -26790053 + Lx8 LINE L1 7124 7470 -3 8 1298 1192 55 7 0 chr13 93494291 93494437 -26789875 + B1_Mm SINE Alu 1 147 0 8 1298 1977 207 44 8 chr13 93494471 93494855 -26789457 + Lx5 LINE L1 6648 7045 -5 8 1298 397 259 25 34 chr13 93495322 93495492 -26788820 + MLT1C LTR MaLR 264 413 -54 8 1298 1911 219 91 23 chr13 93495497 93496024 -26788288 - RLTR20B1 LTR ERVK 0 563 1 8 1298 1877 147 9 9 chr13 93496039 93496369 -26787943 + RLTR11A2 LTR ERVK 1 330 -197 8 1298 9302 124 39 49 chr13 93496369 93498545 -26785767 + L1_Mus2 LINE L1 4396 6546 -20 8 1298 1037 159 40 0 chr13 93498551 93498752 -26785560 + RLTR11A2 LTR ERVK 317 525 -2 8 1298 273 57 0 0 chr13 93500474 93500509 -26783803 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1298 455 263 148 33 chr13 93500513 93500757 -26783555 - B4A SINE B4 -19 273 2 2 1298 334 286 131 54 chr13 93501144 93501487 -26782825 - MTEa LTR MaLR -7 372 2 3 1298 370 0 40 0 chr13 93501614 93501664 -26782648 + (TTA)n Simple_repeat Simple_repeat 3 54 0 4 1298 333 301 110 0 chr13 93502068 93502204 -26782108 + RMER15 LTR ERVL 422 572 -3 5 1298 253 277 84 0 chr13 93503374 93503457 -26780855 + MER5A1 DNA MER1_type 25 114 -52 6 1298 294 29 0 0 chr13 93504608 93504643 -26779669 + (CTCA)n Simple_repeat Simple_repeat 4 38 0 7 1298 229 273 0 35 chr13 93504900 93504957 -26779355 - MER50 LTR ERV1 -58 676 622 8 1298 564 111 0 0 chr13 93505648 93505747 -26778565 + (TG)n Simple_repeat Simple_repeat 2 100 0 9 1298 24 53 0 0 chr13 93506091 93506129 -26778183 + AT_rich Low_complexity Low_complexity 1 38 0 1 1298 368 296 98 0 chr13 93506371 93506503 -26777809 + Charlie4z DNA MER1_type 15 159 -8 1 1298 238 339 77 56 chr13 93506531 93506765 -26777547 + MIR SINE MIR 5 243 -19 1 1298 592 237 93 62 chr13 93507413 93507638 -26776674 + MTE2a LTR MaLR 3 234 -145 1 1298 201 39 0 0 chr13 93507642 93507668 -26776644 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1298 272 316 25 25 chr13 93507678 93507759 -26776553 - PB1D10 SINE Alu -36 81 1 1 1298 279 0 0 0 chr13 93507835 93507866 -26776446 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1298 288 0 0 0 chr13 93507866 93507897 -26776415 + (GA)n Simple_repeat Simple_repeat 1 32 0 1 1298 260 220 0 0 chr13 93507963 93508013 -26776299 - LTR16C LTR ERVL -13 476 427 1 1298 267 258 0 29 chr13 93508014 93508082 -26776230 + ID4_ SINE ID 16 81 -2 1 1298 221 265 125 19 chr13 93508063 93508107 -26776205 + B1F SINE Alu 27 141 -8 2 1298 268 267 17 0 chr13 93508107 93508167 -26776145 + ID_B1 SINE B4 156 216 -8 2 1298 2358 159 74 0 chr13 93508378 93508768 -26775544 + MTC LTR MaLR 1 419 -2 2 1298 496 306 84 37 chr13 93509089 93509303 -26775009 - MTEa LTR MaLR -155 224 1 2 1298 279 0 0 0 chr13 93509608 93509639 -26774673 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1298 1010 211 19 5 chr13 93509843 93510048 -26774264 - B3 SINE B2 -5 211 4 2 1298 202 139 28 0 chr13 93510109 93510145 -26774167 + (CATA)n Simple_repeat Simple_repeat 1 37 0 2 1298 375 105 0 0 chr13 93511106 93511163 -26773149 + (TCTG)n Simple_repeat Simple_repeat 4 60 0 2 1298 275 349 49 73 chr13 93511199 93511363 -26772949 - RSINE1 SINE B4 0 165 6 2 1298 331 260 98 80 chr13 93511544 93511584 -26772728 + MT2B LTR ERVL 60 125 -476 2 1298 401 162 40 26 chr13 93511584 93511660 -26772652 + PB1D10 SINE Alu 8 84 -33 3 1298 331 260 98 80 chr13 93511660 93511755 -26772557 + MT2B LTR ERVL 126 287 -314 2 1298 411 202 99 20 chr13 93511668 93511769 -26772543 + PB1D10 SINE Alu 8 116 -1 3 1298 577 291 8 86 chr13 93512611 93512834 -26771478 - B3A SINE B2 -4 212 2 3 1298 572 267 96 10 chr13 93512900 93513097 -26771215 - ID_B1 SINE B4 -10 214 1 3 1298 423 0 0 0 chr13 93513160 93513207 -26771105 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1298 25246 40 1 1 chr13 93514000 93517765 -26766547 - L1Md_F2 LINE L1 0 6582 2817 3 1298 1674 186 82 20 chr13 93517866 93518218 -26766094 + ORR1D1 LTR MaLR 1 374 0 3 1298 1626 244 143 22 chr13 93519576 93520121 -26764191 + Lx8 LINE L1 6415 7025 -448 3 1298 550 297 115 0 chr13 93520606 93520798 -26763514 + ID_B1 SINE B4 2 215 -9 3 1298 23 0 0 0 chr13 93520800 93520823 -26763489 + AT_rich Low_complexity Low_complexity 1 23 0 3 1298 22 0 0 0 chr13 93522207 93522229 -26762083 + GC_rich Low_complexity Low_complexity 1 22 0 4 1298 1504 58 21 0 chr13 93523027 93523217 -26761095 - B2_Mm2 SINE B2 0 195 2 4 1298 199 345 129 0 chr13 93523916 93524055 -26760257 - L2b LINE L2 -39 3336 3180 4 1298 1267 237 61 104 chr13 93525597 93525992 -26758320 + MTE2a LTR MaLR 1 378 -1 4 1298 1001 214 114 103 chr13 93526763 93527309 -26757003 + RLTR11A LTR ERVK 1 511 -17 4 1298 207 0 0 0 chr13 93527313 93527336 -26756976 + (TA)n Simple_repeat Simple_repeat 1 23 0 4 1298 209 333 81 48 chr13 93528357 93528543 -26755769 + MIRc SINE MIR 39 230 -38 4 1298 265 286 0 0 chr13 93529824 93529894 -26754418 - ID4 SINE ID -9 74 5 4 1298 369 276 134 7 chr13 93530064 93530206 -26754106 - MIR SINE MIR -1 261 102 4 1298 277 355 82 57 chr13 93531879 93532045 -26752267 + MER63A DNA AcHobo 58 210 0 4 1298 571 241 0 78 chr13 93533737 93533890 -26750422 + ID_B1 SINE B4 84 224 0 5 1298 701 309 27 31 chr13 93533890 93534114 -26750198 + B4A SINE B4 2 224 -68 5 1298 626 297 19 14 chr13 93534399 93534614 -26749698 - B3 SINE B2 0 216 1 5 1298 374 0 22 0 chr13 93534908 93534954 -26749358 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1298 468 0 0 0 chr13 93536112 93536164 -26748148 + (TCTA)n Simple_repeat Simple_repeat 1 52 0 5 1298 435 233 225 33 chr13 93536266 93536386 -26747926 - B1_Mur3 SINE Alu -5 144 2 5 1298 919 214 52 21 chr13 93537819 93538010 -26746302 - B3 SINE B2 0 216 20 5 1298 222 159 60 24 chr13 93538058 93538142 -26746170 + (TA)n Simple_repeat Simple_repeat 1 87 0 5 1298 499 212 19 39 chr13 93538142 93538245 -26746067 - RSINE1 SINE B4 0 165 65 5 1298 279 330 0 0 chr13 93538247 93538341 -26745971 - L1MA9 LINE L1 -42 6270 6177 5 1298 425 318 15 37 chr13 93538360 93538494 -26745818 - B1F SINE Alu -1 148 18 6 1298 292 323 15 45 chr13 93538991 93539124 -26745188 + MIR SINE MIR 79 207 -55 6 1298 231 308 0 82 chr13 93539180 93539265 -26745047 + MTEb LTR MaLR 297 374 -5 6 1298 21 36 0 0 chr13 93539306 93539334 -26744978 + AT_rich Low_complexity Low_complexity 1 28 0 6 1298 318 280 42 70 chr13 93540781 93540923 -26743389 - L1MEd LINE L1 -5055 1064 927 6 1298 257 253 29 81 chr13 93541054 93541226 -26743086 - Lx9 LINE L1 0 7644 7482 6 1298 484 292 219 24 chr13 93541235 93541523 -26742789 + Lx9 LINE L1 7084 7427 -217 6 1298 24 0 0 0 chr13 93543741 93543765 -26740547 + AT_rich Low_complexity Low_complexity 1 24 0 6 1298 241 226 95 16 chr13 93545572 93545635 -26738677 - ID4 SINE ID -13 70 3 6 1298 317 254 42 1 chr13 93545635 93545708 -26738604 - B1F SINE Alu -45 75 1 6 1298 353 342 67 7 chr13 93546567 93546717 -26737595 - MER5B DNA MER1_type 0 178 20 6 1298 351 0 0 0 chr13 93547909 93547948 -26736364 + (CA)n Simple_repeat Simple_repeat 2 40 0 7 1298 288 229 0 0 chr13 93547948 93548031 -26736281 + GA-rich Low_complexity Low_complexity 3 85 0 7 1298 2142 150 0 0 chr13 93548031 93548358 -26735954 + ORR1A2 LTR MaLR 1 327 0 7 1298 297 0 0 0 chr13 93548367 93548400 -26735912 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1298 853 272 26 40 chr13 93548515 93548787 -26735525 - Lx6 LINE L1 -72 7388 7121 7 1298 749 232 163 6 chr13 93549064 93549242 -26735070 + B3 SINE B2 11 216 0 7 1298 312 243 14 14 chr13 93549395 93549466 -26734846 + HAL1-3A_ME LINE L1 1975 2045 -813 7 1298 387 0 0 0 chr13 93549565 93549608 -26734704 + (TA)n Simple_repeat Simple_repeat 2 44 0 7 1298 379 259 215 0 chr13 93549608 93549743 -26734569 + RSINE1 SINE B4 2 165 0 7 1298 434 279 168 11 chr13 93551824 93552009 -26732303 - B3 SINE B2 -1 215 2 7 1298 352 352 144 44 chr13 93553251 93553573 -26730739 - L3 LINE CR1 -75 4414 4072 8 1298 432 97 0 0 chr13 93553573 93553635 -26730677 + (TG)n Simple_repeat Simple_repeat 2 63 0 8 1298 352 352 144 44 chr13 93553635 93553743 -26730569 - L3 LINE CR1 -418 4071 3941 8 1298 1008 211 9 64 chr13 93553809 93554027 -26730285 + B3 SINE B2 11 216 0 8 1298 202 389 77 23 chr13 93554065 93554286 -26730026 - L3 LINE CR1 -1078 3411 3179 8 1298 270 191 0 0 chr13 93554288 93554335 -26729977 + (TAA)n Simple_repeat Simple_repeat 1 47 0 8 1298 321 243 14 0 chr13 93554813 93554887 -26729425 - ID4_ SINE ID -7 76 2 8 1298 515 297 7 33 chr13 93554897 93555047 -26729265 - ID_B1 SINE B4 -2 222 77 8 1298 253 281 112 120 chr13 93555065 93555324 -26728988 - L3 LINE CR1 -1597 2892 2636 8 1298 407 194 10 0 chr13 93555776 93555879 -26728433 + (TCCA)n Simple_repeat Simple_repeat 4 107 0 8 1298 292 239 43 21 chr13 93557652 93557746 -26726566 - MTEb LTR MaLR 0 379 284 8 1298 459 0 0 0 chr13 93557807 93557858 -26726454 + (GA)n Simple_repeat Simple_repeat 2 52 0 8 1298 385 241 0 25 chr13 93558005 93558086 -26726226 + ID4_ SINE ID 2 80 -3 8 1298 661 273 86 32 chr13 93559193 93559473 -26724839 + MLT1A LTR MaLR 43 337 -37 9 1298 501 322 62 52 chr13 93559595 93559900 -26724412 + Lx8 LINE L1 6988 7295 -178 9 1298 1654 115 30 63 chr13 93559975 93560308 -26724004 + RLTRETN_Mm LTR ERVK 1 322 0 9 1298 333 100 0 0 chr13 93561201 93561251 -26723061 + (TGG)n Simple_repeat Simple_repeat 2 51 0 9 1298 403 289 136 78 chr13 93561722 93561989 -26722323 + L1M5 LINE L1 5270 5548 -576 9 1298 315 256 13 0 chr13 93561989 93562067 -26722245 - ID4_ SINE ID 0 83 5 9 1298 403 289 136 78 chr13 93562067 93562212 -26722100 + L1M5 LINE L1 5549 5706 -418 9 1298 216 0 0 0 chr13 93563989 93564013 -26720299 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1298 21 36 0 0 chr13 93564598 93564626 -26719686 + GC_rich Low_complexity Low_complexity 1 28 0 9 1298 24 0 0 0 chr13 93564808 93564832 -26719480 + GC_rich Low_complexity Low_complexity 1 24 0 9 1298 336 24 0 0 chr13 93565296 93565337 -26718975 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 9 1298 693 97 0 0 chr13 93566227 93566330 -26717982 + (CA)n Simple_repeat Simple_repeat 2 104 0 1 1298 449 221 26 52 chr13 93566383 93566511 -26717801 + B1F SINE Alu 9 133 -16 1 1298 3508 175 186 58 chr13 93567284 93568218 -26716094 + RMER1B Other Other 13 1066 0 1 1298 643 292 93 5 chr13 93568284 93568567 -26715745 + L1MA4 LINE L1 4956 5291 -852 1 1298 777 103 0 0 chr13 93568567 93568693 -26715619 + (TC)n Simple_repeat Simple_repeat 1 126 0 1 1298 427 323 80 97 chr13 93568693 93568957 -26715355 + L1MA4 LINE L1 5259 5528 -769 1 1298 503 293 58 26 chr13 93568959 93569214 -26715098 + L1MA4 LINE L1 5659 5930 -370 1 1298 366 107 0 0 chr13 93569214 93569270 -26715042 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1298 323 347 63 26 chr13 93569270 93569283 -26715029 + L1MA4 LINE L1 5925 5937 -1707 1 1298 233 250 78 20 chr13 93569865 93569967 -26714345 + LTR52 LTR ERVL 1 108 -313 1 1298 315 363 85 37 chr13 93571963 93572235 -26712077 - L2b LINE L2 -38 3337 3053 1 1298 258 316 0 0 chr13 93572668 93572747 -26711565 + ID SINE ID 4 82 -142 1 1298 285 228 0 27 chr13 93572689 93572763 -26711549 + ID4_ SINE ID 24 97 -55 1 1298 188 284 14 56 chr13 93572764 93572835 -26711477 - L2b LINE L2 -1387 2032 1965 1 1298 1384 45 6 32 chr13 93573309 93573648 -26710664 + (TCTCCC)n Simple_repeat Simple_repeat 1 330 0 1 1298 413 240 116 0 chr13 93574039 93574160 -26710152 + MER58B DNA MER1_type 19 153 -188 1 1298 465 151 0 0 chr13 93574760 93574846 -26709466 + GA-rich Low_complexity Low_complexity 1 86 0 1 1298 202 227 23 0 chr13 93575013 93575057 -26709255 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 1 1298 1462 237 17 29 chr13 93575057 93575401 -26708911 - Lx6 LINE L1 -26 7434 7095 1 1298 278 221 32 42 chr13 93575388 93575491 -26708821 - Lx6 LINE L1 -881 6815 6715 1 1298 377 294 162 20 chr13 93575977 93576175 -26708137 + RMER15 LTR ERVL 336 561 -14 1 1298 1922 170 5 116 chr13 93576988 93577420 -26706892 + ORR1C2 LTR MaLR 1 384 0 1 1298 276 250 51 38 chr13 93578392 93578471 -26705841 - ID4_ SINE ID -2 81 2 1 1298 549 0 0 0 chr13 93578471 93578532 -26705780 + (TTTTG)n Simple_repeat Simple_repeat 2 62 0 1 1298 1150 51 0 0 chr13 93578532 93578669 -26705643 - B1_Mm SINE Alu -10 137 1 1 1298 6725 145 40 3 chr13 93579091 93580844 -26703468 + Lx2 LINE L1 4841 6641 -356 1 1298 1459 101 0 22 chr13 93580844 93581067 -26703245 + Lx LINE L1 6437 6654 0 1 1298 814 112 169 30 chr13 93581473 93581639 -26702673 - Lx LINE L1 0 6654 6466 1 1298 272 91 0 22 chr13 93581757 93581802 -26702510 + U2 snRNA snRNA 1 44 -144 1 1298 575 259 8 0 chr13 93581805 93581936 -26702376 + RSINE1 SINE B4 3 134 -31 1 1298 737 35 35 0 chr13 93581938 93582051 -26702261 + (CA)n Simple_repeat Simple_repeat 1 117 0 1 1298 762 208 4 0 chr13 93582984 93583211 -26701101 + (TG)n Simple_repeat Simple_repeat 1 227 0 1 1298 812 236 124 26 chr13 93583262 93583527 -26700785 - B4A SINE B4 -1 291 1 1 1298 494 264 33 82 chr13 93583728 93583910 -26700402 + B4A SINE B4 118 290 -2 1 1298 1141 233 106 10 chr13 93584205 93584591 -26699721 + RCHARR1 DNA MER1_type 541 963 -11 1 1299 1616 37 11 0 chr13 93586968 93587159 -26697153 + B2_Mm1a SINE B2 1 193 0 1 1299 515 308 53 31 chr13 93587506 93587753 -26696559 - MIRb SINE MIR -10 258 6 1 1299 1207 235 104 12 chr13 93588282 93588618 -26695694 - ORR1D1 LTR MaLR -7 367 1 1 1299 243 315 0 67 chr13 93588927 93589046 -26695266 - MTEb LTR MaLR 0 379 269 1 1299 349 281 39 10 chr13 93589706 93589810 -26694502 - B1F SINE Alu -3 146 40 1 1299 1541 155 97 16 chr13 93590207 93590632 -26693680 - RLTR16 LTR ERVK 0 505 9 1 1299 3023 52 36 8 chr13 93590632 93591017 -26693295 + MTA_Mm LTR MaLR 1 396 0 1 1299 201 94 0 0 chr13 93591249 93591281 -26693031 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1299 354 345 43 24 chr13 93591362 93591570 -26692742 + LTR16A LTR ERVL 239 450 -1 1 1299 402 196 0 0 chr13 93592006 93592098 -26692214 + GA-rich Low_complexity Low_complexity 2 93 0 1 1299 513 0 0 0 chr13 93592626 93592683 -26691629 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1299 432 0 0 0 chr13 93592683 93592730 -26691582 + (GA)n Simple_repeat Simple_repeat 2 49 0 1 1299 234 0 0 0 chr13 93593196 93593222 -26691090 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1299 533 223 0 32 chr13 93593224 93593409 -26690903 + (TATG)n Simple_repeat Simple_repeat 2 180 0 1 1299 945 273 60 23 chr13 93593448 93593714 -26690598 - B4 SINE B4 -4 288 13 1 1299 405 270 113 13 chr13 93593725 93593875 -26690437 + MER20 DNA MER1_type 53 217 -2 1 1299 230 256 13 13 chr13 93594045 93594124 -26690188 + MER53 DNA hAT 114 192 -1 1 1299 339 348 135 64 chr13 93594646 93594903 -26689409 + B4 SINE B4 2 278 -14 1 1299 414 0 0 0 chr13 93594903 93594949 -26689363 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1299 2460 134 15 15 chr13 93596208 93596602 -26687710 - ORR1B1 LTR MaLR 0 394 1 1 1299 1177 246 37 10 chr13 93597198 93597498 -26686814 - Lx6 LINE L1 -2 7458 7151 1 1299 1399 157 109 4 chr13 93597484 93597740 -26686572 + Lx6 LINE L1 6694 6976 -484 1 1299 259 220 0 0 chr13 93597738 93597788 -26686524 + Lx6 LINE L1 7102 7151 -309 1 1299 560 209 0 18 chr13 93597815 93597927 -26686385 - PB1D9 SINE Alu -10 110 1 1 1299 255 246 145 26 chr13 93598383 93598500 -26685812 - MLT1A0 LTR MaLR -234 131 1 1 1299 818 289 57 68 chr13 93600959 93601230 -26683082 - MLT1C LTR MaLR 0 467 201 1 1299 1187 235 156 11 chr13 93601230 93601596 -26682716 - MTD LTR MaLR 0 419 1 1 1299 818 289 57 68 chr13 93601596 93601763 -26682549 - MLT1C LTR MaLR -267 200 34 1 1299 543 69 0 0 chr13 93601781 93601853 -26682459 + (TTCTG)n Simple_repeat Simple_repeat 4 75 0 1 1299 703 256 69 29 chr13 93602068 93602345 -26681967 - L1MD LINE L1 -767 5577 5290 1 1299 408 280 114 25 chr13 93602770 93603281 -26681031 - L1MD LINE L1 -3123 3023 2477 1 1299 1250 218 82 27 chr13 93603306 93603636 -26680676 + MTEb LTR MaLR 4 351 -28 1 1299 550 309 20 64 chr13 93603616 93603820 -26680492 - B3A SINE B2 -1 197 3 1 1299 36719 57 16 2 chr13 93603900 93609147 -26675165 + L1Md_T LINE L1 196 5589 -297 1 1299 8299 51 0 0 chr13 93609147 93610143 -26674169 + L1Md_T LINE L1 5590 6585 0 1 1299 239 303 0 0 chr13 93610270 93610336 -26673976 + CT-rich Low_complexity Low_complexity 1 66 0 1 1299 238 338 192 19 chr13 93611557 93611771 -26672541 + MIR SINE MIR 12 262 0 1 1299 234 0 0 0 chr13 93611897 93611923 -26672389 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1 1299 230 345 0 0 chr13 93613720 93613778 -26670534 - MER45R DNA Tip100 0 1581 1524 1 1299 293 337 33 0 chr13 93613794 93613886 -26670426 - MER45R DNA Tip100 -1481 100 7 1 1299 525 230 146 0 chr13 93614036 93614214 -26670098 - B3 SINE B2 -10 206 3 1 1299 303 28 0 0 chr13 93615699 93615735 -26668577 + (TTA)n Simple_repeat Simple_repeat 2 37 0 1 1299 250 245 29 47 chr13 93616140 93616253 -26668059 - ID2 SINE ID -27 125 11 1 1299 285 300 12 0 chr13 93617246 93617326 -26666986 - L2b LINE L2 -1 3374 3294 1 1299 577 240 50 22 chr13 93617891 93618070 -26666242 + RMER5 LTR ERV1 319 502 -32 1 1299 220 301 0 14 chr13 93618466 93618540 -26665772 + BC1_Mm scRNA scRNA 1 73 -79 1 1299 500 180 6 18 chr13 93624303 93624467 -26659845 + (TG)n Simple_repeat Simple_repeat 2 163 0 1 1299 775 232 19 93 chr13 93625941 93626155 -26658157 + B3A SINE B2 1 198 0 1 1299 260 264 21 32 chr13 93626174 93626268 -26658044 + L1MC4a LINE L1 7790 7882 0 1 1299 248 256 116 0 chr13 93627005 93627091 -26657221 + MER103 DNA DNA 8 103 -63 1 1299 462 49 0 0 chr13 93628615 93628676 -26655636 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1299 495 299 249 9 chr13 93628683 93628916 -26655396 - B4 SINE B4 -2 290 2 1 1299 393 250 241 12 chr13 93629513 93629582 -26654730 + B3 SINE B2 3 70 -146 1 1299 3760 114 31 28 chr13 93629582 93630197 -26654115 - Lx LINE L1 0 6654 6038 1 1299 393 250 241 12 chr13 93630197 93630297 -26654015 + B3 SINE B2 71 211 -5 1 1299 311 236 117 39 chr13 93631657 93631785 -26652527 - MLT1A1 LTR MaLR -270 138 1 1 1299 427 236 9 62 chr13 93631985 93632098 -26652214 + Lx9 LINE L1 7262 7368 -276 1 1299 884 267 74 12 chr13 93632733 93632991 -26651321 + B4A SINE B4 1 274 -18 1 1299 263 299 45 19 chr13 93633405 93633619 -26650693 - L1MD LINE L1 -656 5584 5359 1 1299 747 220 91 53 chr13 93634144 93634408 -26649904 - RMER20B LTR ERVK -222 405 132 1 1299 390 293 8 8 chr13 93634685 93634802 -26649510 - PB1D10 SINE Alu 0 117 1 1 1299 200 300 9 18 chr13 93635449 93635561 -26648751 + L3 LINE CR1 3595 3705 -784 1 1299 294 314 124 59 chr13 93636746 93637217 -26647095 - L2a LINE L2 0 3426 2909 1 1299 648 265 66 0 chr13 93637372 93637553 -26646759 - B4A SINE B4 -94 198 6 1 1299 625 291 247 47 chr13 93637560 93638325 -26645987 - L2a LINE L2 -592 2827 1910 1 1299 470 307 0 8 chr13 93639362 93639490 -26644822 - B4A SINE B4 -122 170 44 1 1299 304 236 0 0 chr13 93639575 93639647 -26644665 + ID_B1 SINE B4 127 198 -26 1 1299 192 40 0 0 chr13 93639647 93639672 -26644640 + (CAAAAA)n Simple_repeat Simple_repeat 4 28 0 1 1299 6532 103 21 0 chr13 93641157 93642088 -26642224 - L1_Mus2 LINE L1 -60 5823 4873 1 1299 5621 50 37 7 chr13 93642088 93642797 -26641515 + L1_Mus2 LINE L1 5837 6566 0 1 1299 36466 61 2 3 chr13 93642871 93649086 -26635226 - L1Md_F2 LINE L1 -4 6581 277 1 1299 348 136 55 33 chr13 93649171 93649262 -26635050 + RLTR9A LTR ERVK 1 93 -275 1 1299 183 348 29 14 chr13 93651966 93652036 -26632276 + MIRc SINE MIR 19 89 -179 1 1299 255 79 0 0 chr13 93652963 93653001 -26631311 + (CAAA)n Simple_repeat Simple_repeat 4 41 0 1 1299 1908 158 245 15 chr13 93653638 93654100 -26630212 - RLTR12A LTR ERVK 0 568 1 1 1299 476 316 47 80 chr13 93654171 93654258 -26630054 - MLT1A0 LTR MaLR 0 365 281 1 1299 271 302 64 14 chr13 93654258 93654399 -26629913 + B1F SINE Alu 1 148 -1 1 1299 476 316 47 80 chr13 93654399 93654586 -26629726 - MLT1A0 LTR MaLR -85 280 100 1 1299 295 312 0 40 chr13 93654638 93654738 -26629574 + G-rich Low_complexity Low_complexity 1 96 0 1 1299 662 266 139 16 chr13 93654791 93655036 -26629276 + ORR1D2 LTR MaLR 1 275 -95 2 1299 2792 176 59 20 chr13 93655061 93655465 -26628847 + RLTR18 LTR ERVK 1 419 -197 2 1299 2069 161 92 19 chr13 93655465 93655844 -26628468 + MTB_Mm LTR MaLR 1 407 0 2 1299 2792 176 59 20 chr13 93655844 93656030 -26628282 + RLTR18 LTR ERVK 420 614 -2 2 1299 360 0 0 0 chr13 93656039 93656079 -26628233 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1299 2308 152 144 29 chr13 93656424 93656510 -26627802 - RMER4B LTR ERVK -9 576 476 2 1299 6671 96 42 19 chr13 93656510 93657471 -26626841 + RLTR13C1 LTR ERVK 1 983 0 2 1299 2308 152 144 29 chr13 93657471 93657899 -26626413 - RMER4B LTR ERVK -110 475 3 2 1299 353 260 188 0 chr13 93658424 93658520 -26625792 - PB1D10 SINE Alu -1 116 3 2 1299 202 143 24 0 chr13 93658522 93658564 -26625748 + A-rich Low_complexity Low_complexity 5 47 0 2 1299 266 271 71 0 chr13 93658901 93658971 -26625341 - Charlie15a DNA MER1_type -79 145 71 2 1299 183 162 0 0 chr13 93658979 93659016 -26625296 + (TTAA)n Simple_repeat Simple_repeat 2 38 0 2 1299 226 298 53 11 chr13 93659822 93659917 -26624395 + ORR1D2 LTR MaLR 281 379 0 2 1299 463 93 11 23 chr13 93659939 93660027 -26624285 + (TATG)n Simple_repeat Simple_repeat 2 88 0 2 1299 470 224 10 58 chr13 93660029 93660133 -26624179 - PB1D7 SINE Alu -8 112 14 2 1299 795 114 15 8 chr13 93660244 93660377 -26623935 - RLTR13D2 LTR ERVK 0 1114 981 2 1299 39232 40 1 6 chr13 93660377 93666355 -26617957 - L1Md_F2 LINE L1 0 6582 647 2 1299 3348 112 18 65 chr13 93666355 93667106 -26617206 - RLTR13D2 LTR ERVK -119 904 5 2 1299 1962 198 106 57 chr13 93667763 93668271 -26616041 + RMER16 LTR ERVK 1 533 0 2 1299 180 111 0 0 chr13 93668705 93668732 -26615580 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 2 1299 819 176 182 0 chr13 93669132 93669319 -26614993 - ID_B1 SINE B4 -3 221 1 2 1299 1225 61 0 0 chr13 93669839 93669986 -26614326 - B1_Mus2 SINE Alu 0 147 1 2 1299 1350 170 130 19 chr13 93670340 93670663 -26613649 - ORR1B2 LTR MaLR -8 359 1 2 1299 461 186 40 89 chr13 93670891 93671015 -26613297 + PB1D9 SINE Alu 2 119 -1 2 1299 1086 178 8 38 chr13 93671168 93671408 -26612904 + Lx4A LINE L1 6826 7058 0 2 1299 350 220 21 21 chr13 93671493 93671586 -26612726 - MLT1A1 LTR MaLR -1 407 315 2 1299 544 274 7 22 chr13 93672807 93672945 -26611367 - B1F2 SINE Alu -1 148 13 2 1299 328 304 117 39 chr13 93674610 93674970 -26609342 - L1M5 LINE L1 -491 5703 5316 2 1299 23 0 0 0 chr13 93675033 93675056 -26609256 + AT_rich Low_complexity Low_complexity 1 23 0 2 1299 418 206 169 37 chr13 93675383 93675519 -26608793 - MTE2a LTR MaLR -225 154 1 2 1299 279 299 5 11 chr13 93675610 93675805 -26608507 + (CA)n Simple_repeat Simple_repeat 1 193 0 2 1299 586 142 83 19 chr13 93678637 93678745 -26605567 - PB1D9 SINE Alu -2 118 4 2 1299 1976 138 40 77 chr13 93678862 93679263 -26605049 - ORR1B1 LTR MaLR -8 386 1 2 1299 439 219 239 26 chr13 93679327 93679482 -26604830 - B3A SINE B2 -10 188 1 2 1299 250 139 0 0 chr13 93679483 93679523 -26604789 + Tigger7 DNA MER2_type 62 101 -2390 2 1299 2326 150 9 39 chr13 93679523 93679982 -26604330 - RLTR20B2 LTR ERVK -1 559 115 2 1299 347 197 245 14 chr13 93680189 93680328 -26603984 + Tigger7 DNA MER2_type 2293 2459 -32 2 1299 254 277 43 65 chr13 93680614 93680753 -26603559 + MLT1H LTR MaLR 400 535 -14 2 1299 747 309 96 52 chr13 93685241 93685667 -26598645 - MER89 LTR ERV1 -102 457 13 2 1299 510 272 9 0 chr13 93686800 93686914 -26597398 - PB1D9 SINE Alu -5 115 1 2 1299 2020 132 114 199 chr13 93686903 93687525 -26596787 - RMER4B LTR ERVK 0 585 17 2 1299 214 321 12 12 chr13 93687598 93687683 -26596629 + (CACCC)n Simple_repeat Simple_repeat 3 87 0 2 1299 966 281 112 7 chr13 93688741 93689017 -26595295 - MTE2b LTR MaLR -74 305 1 2 1299 288 320 166 17 chr13 93689417 93689706 -26594606 + L2a LINE L2 3085 3416 -10 2 1299 204 125 0 0 chr13 93690246 93690278 -26594034 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1299 261 100 80 0 chr13 93690635 93690685 -26593627 + MTEb LTR MaLR 1 54 -325 2 1299 686 244 43 67 chr13 93690781 93691009 -26593303 + MTEb LTR MaLR 91 313 -66 2 1299 2470 125 14 68 chr13 93691009 93691422 -26592890 + ORR1B1 LTR MaLR 4 394 0 2 1299 686 278 41 97 chr13 93691422 93691496 -26592816 + MTEb LTR MaLR 295 357 -2 2 1299 717 287 62 18 chr13 93691911 93692184 -26592128 + B4A SINE B4 2 286 -6 2 1299 530 247 70 89 chr13 93692665 93692936 -26591376 - L1MA8 LINE L1 -18 6273 6008 2 1299 845 234 29 24 chr13 93693262 93693472 -26590840 - B3 SINE B2 -5 211 1 2 1299 362 311 33 13 chr13 93693525 93693675 -26590637 - RSINE1 SINE B4 -10 155 3 2 1299 513 236 40 65 chr13 93695530 93695729 -26588583 - B3A SINE B2 -4 194 1 2 1299 1152 232 139 12 chr13 93695755 93696087 -26588225 + MTEb LTR MaLR 6 379 0 2 1299 235 337 0 40 chr13 93697361 93697460 -26586852 + PB1D10 SINE Alu 23 117 0 2 1299 205 244 0 0 chr13 93697709 93697750 -26586562 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1299 414 0 0 0 chr13 93697766 93697812 -26586500 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1299 2021 208 9 21 chr13 93697868 93698290 -26586022 - MTD LTR MaLR -2 417 1 2 1299 316 346 119 0 chr13 93698771 93699014 -26585298 + HAL1 LINE L1 621 892 -1615 2 1299 599 109 22 54 chr13 93699277 93699462 -26584850 + (CAGA)n Simple_repeat Simple_repeat 2 180 0 2 1299 211 213 0 0 chr13 93699462 93699509 -26584803 + GA-rich Low_complexity Low_complexity 1 47 0 2 1299 338 325 91 28 chr13 93699758 93700011 -26584301 + HAL1 LINE L1 1626 1894 -613 2 1299 369 0 0 0 chr13 93700428 93700469 -26583843 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1299 324 0 0 0 chr13 93700469 93700504 -26583808 + (GA)n Simple_repeat Simple_repeat 1 36 0 2 1299 797 291 166 69 chr13 93700529 93701149 -26583163 - L1MB8 LINE L1 -48 6130 5443 2 1299 565 265 110 48 chr13 93701149 93701422 -26582890 - B4A SINE B4 -1 291 2 2 1299 797 291 166 69 chr13 93701422 93701555 -26582757 - L1MB8 LINE L1 -736 5442 5304 2 1299 947 265 57 24 chr13 93701746 93702044 -26582268 - Lx8 LINE L1 -284 7189 6882 2 1299 6118 75 15 26 chr13 93702330 93703909 -26580403 + L1VL4 LINE L1 193 1754 -1805 2 1299 459 0 0 0 chr13 93703909 93703960 -26580352 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1299 530 81 0 0 chr13 93703961 93704035 -26580277 - BC1_Mm scRNA scRNA -78 74 1 2 1299 314 274 3 0 chr13 93704199 93704298 -26580014 - PB1D10 SINE Alu -2 118 17 2 1299 207 0 0 0 chr13 93704931 93704954 -26579358 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1299 1245 121 16 0 chr13 93705146 93705336 -26578976 + B2_Mm2 SINE B2 2 194 -1 2 1299 271 284 67 25 chr13 93705413 93705532 -26578780 - LTR33A_ LTR ERVL -5 526 403 2 1299 2347 90 18 21 chr13 93706394 93706722 -26577590 + ORR1A2 LTR MaLR 1 327 0 2 1299 300 261 65 13 chr13 93706947 93707102 -26577210 + L1MEg LINE L1 1304 1466 -4776 2 1299 355 299 173 23 chr13 93707372 93707673 -26576639 - L1M5 LINE L1 -1328 4818 4473 2 1299 311 294 76 29 chr13 93707684 93707789 -26576523 - PB1D10 SINE Alu -5 112 3 2 1299 382 261 77 53 chr13 93708302 93708472 -26575840 + L1MEg LINE L1 1004 1117 -892 2 1299 338 314 117 38 chr13 93709430 93709797 -26574515 + L1M5 LINE L1 5256 5651 -473 2 1299 332 284 8 72 chr13 93709930 93710055 -26574257 + PB1D10 SINE Alu 1 117 0 2 1299 621 231 70 12 chr13 93710449 93710620 -26573692 + B3 SINE B2 36 216 0 2 1299 700 309 38 53 chr13 93710849 93711112 -26573200 + MER2 DNA MER2_type 1 259 -86 2 1299 729 283 128 44 chr13 93711196 93711718 -26572594 + L1M4 LINE L1 4194 4759 -1387 2 1299 314 235 11 45 chr13 93711872 93711961 -26572351 + L1M4 LINE L1 4785 4870 -1276 2 1299 575 306 26 80 chr13 93711962 93712329 -26571983 + MLT1A1 LTR MaLR 1 401 -7 2 1299 299 91 0 22 chr13 93712339 93712384 -26571928 + L1M4 LINE L1 4880 4923 -1223 2 1299 363 290 72 52 chr13 93712435 93712588 -26571724 + MLT1A0 LTR MaLR 33 188 -186 2 1299 244 282 13 0 chr13 93712591 93712669 -26571643 + CT-rich Low_complexity Low_complexity 2 80 0 2 1299 482 297 30 6 chr13 93712706 93712872 -26571440 + MLT1A0 LTR MaLR 186 355 -10 2 1299 258 240 27 0 chr13 93712874 93712949 -26571363 + L1M4 LINE L1 4963 5039 -1107 2 1299 1084 121 68 0 chr13 93713054 93713244 -26571068 - Lx2 LINE L1 0 6997 6795 2 1299 6750 127 27 1 chr13 93713244 93714662 -26569650 - Lx2 LINE L1 -366 6631 5176 2 1299 3167 89 77 19 chr13 93714646 93715326 -26568986 - L1VL2 LINE L1 -5623 712 221 2 1299 265 318 126 11 chr13 93715357 93715532 -26568780 - LTR81B LTR ERV1? -1053 340 146 2 1299 16795 73 55 2 chr13 93715618 93715893 -26568419 + MusHAL1 LINE L1 210 481 -2231 2 1299 528 16 0 0 chr13 93715893 93715954 -26568358 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 162 16795 73 55 2 chr13 93715954 93718052 -26566260 + MusHAL1 LINE L1 482 2709 -3 2 1300 807 115 18 24 chr13 93718166 93718335 -26565977 + GA-rich Low_complexity Low_complexity 3 170 0 2 1300 555 303 121 58 chr13 93719164 93719511 -26564801 - RMER13A LTR ERVK -491 369 1 2 1300 2814 60 84 3 chr13 93720125 93720495 -26563817 - MTB LTR MaLR 0 400 1 2 1300 419 268 109 8 chr13 93720645 93720773 -26563539 + RSINE1 SINE B4 11 151 -14 2 1300 515 385 89 10 chr13 93720931 93721222 -26563090 + MamGypLTR2 LTR Gypsy 504 817 -372 2 1300 304 416 43 5 chr13 93721318 93721528 -26562784 - MER115 DNA Tip100 -400 293 76 2 1300 322 335 144 19 chr13 93722022 93722278 -26562034 - MER21B LTR ERV1 -224 639 352 2 1300 180 0 0 0 chr13 93724672 93724692 -26559620 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1300 234 268 111 20 chr13 93725290 93725389 -26558923 - ORR1E LTR MaLR -9 370 263 2 1300 413 262 76 15 chr13 93725405 93725537 -26558775 - ORR1E LTR MaLR -218 141 2 2 1300 230 292 0 103 chr13 93726240 93726347 -26557965 - RMER1C Other Other -2 1340 1245 2 1300 574 212 233 32 chr13 93726265 93726518 -26557794 - Lx8 LINE L1 -5 7468 7165 2 1300 378 0 0 0 chr13 93726519 93726561 -26557751 + (TC)n Simple_repeat Simple_repeat 2 43 0 2 1300 279 0 0 0 chr13 93726561 93726591 -26557721 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1300 669 58 0 0 chr13 93726716 93726802 -26557510 + (TCC)n Simple_repeat Simple_repeat 3 88 0 2 1300 395 271 10 0 chr13 93727044 93727140 -26557172 - B3A SINE B2 -99 99 3 2 1300 1509 298 108 83 chr13 93727200 93727939 -26556373 + L1M4c LINE L1 8 738 -5646 2 1300 453 36 0 0 chr13 93727939 93727994 -26556318 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 2 1300 1509 298 108 83 chr13 93727994 93728336 -26555976 + L1M4c LINE L1 739 1116 -5268 2 1300 334 311 32 48 chr13 93728632 93728821 -26555491 - L1MC4a LINE L1 -1 7881 7696 3 1300 501 47 0 0 chr13 93728835 93728899 -26555413 + (TATG)n Simple_repeat Simple_repeat 1 64 0 3 1300 225 330 40 0 chr13 93729951 93730051 -26554261 - LTR33B LTR ERVL 0 503 400 3 1300 228 309 86 82 chr13 93730631 93730899 -26553413 + L2 LINE L2 2337 2605 -814 3 1300 216 217 260 42 chr13 93731858 93731954 -26552358 - MIRb SINE MIR -103 165 49 3 1300 457 232 18 9 chr13 93733040 93733153 -26551159 - ID_B1 SINE B4 0 224 111 3 1300 261 0 0 0 chr13 93734917 93734946 -26549366 + (TAAAA)n Simple_repeat Simple_repeat 1 29 0 3 1300 527 309 78 35 chr13 93735195 93735453 -26548859 - LTR16B2 LTR ERVL -153 309 41 3 1300 371 307 68 11 chr13 93736679 93736870 -26547442 + MIRb SINE MIR 67 268 0 3 1300 291 284 10 83 chr13 93738145 93738241 -26546071 + PB1 SINE Alu 27 115 -12 3 1300 993 158 0 0 chr13 93738241 93738418 -26545894 + GA-rich Low_complexity Low_complexity 3 179 0 3 1300 1124 156 5 57 chr13 93739238 93739449 -26544863 - URR1B DNA MER1_type 0 225 26 3 1300 268 304 0 0 chr13 93740038 93740107 -26544205 - ID_B1 SINE B4 -75 149 81 3 1300 266 294 25 99 chr13 93740118 93740239 -26544073 - PB1D10 SINE Alu 0 117 6 3 1300 242 268 35 11 chr13 93741015 93741102 -26543210 + L2 LINE L2 2830 2918 -501 3 1300 603 288 117 68 chr13 93741414 93741783 -26542529 + MLT1C LTR MaLR 79 465 -2 3 1300 481 319 18 44 chr13 93742737 93742963 -26541349 - MIRb SINE MIR -36 232 13 3 1300 360 0 0 0 chr13 93743178 93743218 -26541094 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1300 372 278 68 92 chr13 93745215 93745508 -26538804 + L1MEc LINE L1 2129 2414 -3986 3 1300 423 0 0 0 chr13 93745525 93745572 -26538740 + (TAA)n Simple_repeat Simple_repeat 2 48 0 3 1300 329 320 179 14 chr13 93745769 93746054 -26538258 - MER2B DNA MER2_type 0 336 5 3 1300 221 274 27 0 chr13 93746091 93746164 -26538148 + ID4_ SINE ID 1 75 -8 3 1300 992 201 23 54 chr13 93746547 93746768 -26537544 + B3 SINE B2 3 216 0 3 1300 587 284 34 41 chr13 93746785 93747053 -26537259 + L1MEc LINE L1 3023 3288 -3031 3 1300 1762 150 155 18 chr13 93747275 93747363 -26536949 - RLTR20D LTR ERVK 0 568 480 3 1300 270 0 0 0 chr13 93747363 93747393 -26536919 + (CA)n Simple_repeat Simple_repeat 1 30 0 3 1300 1762 150 155 18 chr13 93747393 93747692 -26536620 - RLTR20D LTR ERVK -89 479 130 3 1300 671 100 0 29 chr13 93747715 93747818 -26536494 - RMER16-int LTR ERVK -650 4756 4657 3 1300 27 0 0 0 chr13 93747833 93747860 -26536452 + AT_rich Low_complexity Low_complexity 1 27 0 3 1300 907 161 0 7 chr13 93747891 93748035 -26536277 - B1_Mur4 SINE Alu -6 144 2 3 1300 264 213 0 0 chr13 93748036 93748083 -26536229 - Lx8 LINE L1 -622 6851 6805 3 1300 1224 86 0 0 chr13 93748085 93748260 -26536052 + (TG)n Simple_repeat Simple_repeat 1 175 0 3 1300 447 19 0 0 chr13 93748260 93748312 -26536000 + (GA)n Simple_repeat Simple_repeat 2 53 0 3 1300 643 176 46 39 chr13 93748312 93748442 -26535870 - Lx8 LINE L1 -681 6792 6662 3 1300 892 232 63 54 chr13 93748442 93748775 -26535537 - RMER16 LTR ERVK 0 533 198 3 1300 305 88 0 123 chr13 93748744 93748809 -26535503 - RMER16 LTR ERVK -476 57 1 3 1300 10803 131 29 47 chr13 93748812 93750536 -26533776 - RMER16-int LTR ERVK -4 5402 3711 3 1300 3275 58 2 2 chr13 93750536 93750932 -26533380 + MTA_Mm LTR MaLR 1 396 0 3 1300 10803 131 29 47 chr13 93750932 93751111 -26533201 - RMER16-int LTR ERVK -1696 3710 3533 3 1300 3244 152 34 36 chr13 93751119 93751992 -26532320 - RLTR19-int LTR ERVK -5250 2156 725 3 1300 1215 163 127 4 chr13 93751995 93752223 -26532089 - RLTR19-int LTR ERVK -5662 475 220 3 1300 21 0 0 0 chr13 93752223 93752244 -26532068 + AT_rich Low_complexity Low_complexity 1 21 0 3 1300 793 249 10 30 chr13 93752247 93752446 -26531866 - RLTR19-int LTR ERVK -5211 195 1 3 1300 1090 192 101 8 chr13 93752446 93752713 -26531599 - RMER16 LTR ERVK 0 533 242 3 1300 511 297 41 24 chr13 93752785 93752954 -26531358 - Lx8 LINE L1 -796 6677 6506 3 1300 322 326 140 36 chr13 93753196 93753690 -26530622 + L1MEf LINE L1 1552 2096 -4146 3 1300 400 286 114 5 chr13 93753743 93753954 -26530358 + L1MEf LINE L1 2323 2556 -3590 3 1300 639 217 127 41 chr13 93753972 93754032 -26530280 + B3 SINE B2 2 61 -155 3 1300 2322 206 28 129 chr13 93754032 93754712 -26529600 - RMER19C LTR ERVK 0 611 1 3 1300 639 217 127 41 chr13 93754712 93754848 -26529464 + B3 SINE B2 62 215 -1 3 1300 465 258 51 6 chr13 93754854 93755010 -26529302 + L1M4 LINE L1 2572 2734 -3412 3 1300 243 44 67 0 chr13 93755286 93755331 -26528981 + (TGGGGG)n Simple_repeat Simple_repeat 1 48 0 3 1300 342 184 75 2 chr13 93755445 93755536 -26528776 + L1MA6 LINE L1 6196 6300 0 3 1300 526 248 0 113 chr13 93756251 93756410 -26527902 + B4 SINE B4 111 251 -41 3 1300 483 18 0 0 chr13 93756412 93756468 -26527844 + (TC)n Simple_repeat Simple_repeat 1 56 0 3 1300 358 227 116 16 chr13 93758874 93758995 -26525317 + B1F1 SINE Alu 3 135 -14 3 1300 259 203 127 28 chr13 93760489 93760560 -26523752 + ID4_ SINE ID 3 80 -3 3 1300 3165 162 47 5 chr13 93761868 93762446 -26521866 + Lx9 LINE L1 6899 7500 -144 3 1300 29 47 0 0 chr13 93762493 93762536 -26521776 + AT_rich Low_complexity Low_complexity 1 43 0 3 1300 668 248 46 99 chr13 93762736 93763018 -26521294 + ORR1E LTR MaLR 24 290 -69 3 1300 29 0 0 0 chr13 93763331 93763360 -26520952 + AT_rich Low_complexity Low_complexity 1 29 0 3 1300 207 0 0 0 chr13 93763615 93763638 -26520674 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1300 241 228 35 0 chr13 93763909 93763966 -26520346 + PB1D7 SINE Alu 62 120 0 3 1300 387 0 0 0 chr13 93764029 93764072 -26520240 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1300 187 56 0 77 chr13 93764239 93764278 -26520034 + (CAAAAA)n Simple_repeat Simple_repeat 6 41 0 3 1300 21 0 0 0 chr13 93764288 93764309 -26520003 + AT_rich Low_complexity Low_complexity 1 21 0 3 1300 269 149 0 15 chr13 93765428 93765496 -26518816 + (CA)n Simple_repeat Simple_repeat 1 67 0 3 1300 696 56 0 0 chr13 93765815 93765904 -26518408 + (GGAA)n Simple_repeat Simple_repeat 1 89 0 3 1300 697 190 6 12 chr13 93767547 93767717 -26516595 + C-rich Low_complexity Low_complexity 2 170 0 3 1300 360 64 0 0 chr13 93767720 93767767 -26516545 + (CCTAT)n Simple_repeat Simple_repeat 1 47 0 3 1300 856 180 11 15 chr13 93767803 93768358 -26515954 + CT-rich Low_complexity Low_complexity 1 552 0 3 1300 514 264 27 60 chr13 93771951 93772100 -26512212 - RSINE1 SINE B4 -19 146 3 3 1300 277 211 0 0 chr13 93773312 93773364 -26510948 + MIRc SINE MIR 52 103 -165 3 1300 201 293 17 0 chr13 93773375 93773433 -26510879 + MIRc SINE MIR 166 224 -44 3 1300 249 345 9 18 chr13 93774942 93775054 -26509258 + MER117 DNA MER1_type 61 171 -26 3 1300 234 278 54 22 chr13 93775770 93775862 -26508450 + LTR88b LTR Gypsy? 742 836 -1 3 1300 854 293 98 12 chr13 93775867 93776202 -26508110 + MLT1A0 LTR MaLR 2 365 0 3 1300 624 186 24 0 chr13 93776925 93777049 -26507263 - B3 SINE B2 -89 127 1 3 1300 813 95 0 0 chr13 93779279 93779395 -26504917 + (TC)n Simple_repeat Simple_repeat 2 117 0 3 1300 246 284 28 64 chr13 93781075 93781184 -26503128 + MER5A DNA MER1_type 83 187 -2 3 1300 439 214 92 0 chr13 93781719 93781817 -26502495 + ID_B1 SINE B4 115 221 -3 3 1300 666 37 0 0 chr13 93782075 93782156 -26502156 + (TTGG)n Simple_repeat Simple_repeat 2 82 0 3 1300 854 215 115 0 chr13 93782380 93782580 -26501732 + ID_B1 SINE B4 2 224 0 3 1300 770 107 0 16 chr13 93782584 93782708 -26501604 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 3 1300 219 157 0 0 chr13 93783519 93783570 -26500742 + (CAGA)n Simple_repeat Simple_repeat 4 54 0 3 1300 256 319 129 12 chr13 93783676 93783847 -26500465 + CR1_Mam LINE CR1 1404 1594 -610 3 1300 235 202 11 0 chr13 93783985 93784043 -26500269 + L1M5 LINE L1 5392 5452 -710 3 1300 420 20 0 0 chr13 93784317 93784366 -26499946 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1300 577 197 254 2 chr13 93784852 93785106 -26499206 - ORR1C2 LTR MaLR -22 362 1 3 1300 5652 212 28 38 chr13 93785106 93786401 -26497911 - ORR1C2-int LTR MaLR 0 1370 87 3 1300 2840 106 21 65 chr13 93786401 93786875 -26497437 - RLTR11B LTR ERVK 0 453 1 3 1300 5652 212 28 38 chr13 93786875 93786962 -26497350 - ORR1C2-int LTR MaLR -1284 86 1 3 1300 1678 194 68 30 chr13 93786962 93787328 -26496984 - ORR1C2 LTR MaLR 0 384 5 3 1300 432 0 0 0 chr13 93787369 93787417 -26496895 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1300 9837 141 18 31 chr13 93787417 93789310 -26495002 + Lx LINE L1 4173 6033 -621 3 1300 5526 101 101 14 chr13 93789310 93790190 -26494122 + RMER17B LTR ERVK 2 958 0 3 1300 6721 122 34 32 chr13 93790190 93790815 -26493497 + Lx LINE L1 6034 6652 -2 3 1300 211 200 15 30 chr13 93791286 93791353 -26492959 + (CAAA)n Simple_repeat Simple_repeat 3 68 0 3 1300 1299 20 0 0 chr13 93792749 93792896 -26491416 + B1_Mm SINE Alu 1 147 0 3 1300 265 218 13 13 chr13 93792898 93792937 -26491375 + polypurine Low_complexity Low_complexity 2 40 0 3 1300 1116 133 0 0 chr13 93792937 93793117 -26491195 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1300 265 218 13 13 chr13 93793117 93793156 -26491156 + polypurine Low_complexity Low_complexity 41 80 0 3 1300 407 340 85 22 chr13 93793224 93793495 -26490817 - MLT1C LTR MaLR -6 461 174 3 1300 507 60 0 0 chr13 93794300 93794367 -26489945 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 1300 369 274 55 17 chr13 93794374 93794574 -26489738 - B4 SINE B4 -21 271 28 3 1300 577 245 93 97 chr13 93795385 93795674 -26488638 - B4A SINE B4 -4 288 1 3 1300 849 71 0 0 chr13 93795983 93796096 -26488216 + (TGGA)n Simple_repeat Simple_repeat 4 116 0 3 1300 1178 183 5 19 chr13 93796243 93796455 -26487857 + B3 SINE B2 1 209 -7 3 1300 24 32 0 0 chr13 93796635 93796666 -26487646 + AT_rich Low_complexity Low_complexity 1 31 0 3 1300 237 319 71 30 chr13 93796735 93796932 -26487380 + L1MD LINE L1 5134 5338 -808 3 1300 297 0 0 0 chr13 93797228 93797261 -26487051 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1300 328 165 62 12 chr13 93797752 93797832 -26486480 - L1ME3 LINE L1 -207 5955 5872 3 1300 468 172 49 0 chr13 93798069 93798191 -26486121 + CT-rich Low_complexity Low_complexity 2 129 0 3 1300 2144 143 8 30 chr13 93798228 93798595 -26485717 + ORR1B2 LTR MaLR 1 359 -8 3 1300 233 295 111 26 chr13 93798727 93798880 -26485432 - ORR1E LTR MaLR -193 166 1 3 1300 489 298 117 55 chr13 93800297 93800588 -26483724 - MTEa LTR MaLR -66 313 5 3 1300 237 366 55 44 chr13 93800901 93801084 -26483228 - MIR SINE MIR -6 256 72 3 1300 2008 188 55 13 chr13 93801936 93802334 -26481978 + MTD LTR MaLR 5 419 0 4 1300 2194 154 94 35 chr13 93802751 93803182 -26481130 + RLTR11A LTR ERVK 1 467 -61 4 1300 3009 35 0 0 chr13 93803182 93803528 -26480784 + ORR1A1 LTR MaLR 1 346 0 4 1300 2194 154 94 35 chr13 93803528 93803587 -26480725 + RLTR11A LTR ERVK 468 520 -8 4 1300 180 135 0 0 chr13 93803961 93803998 -26480314 + (TA)n Simple_repeat Simple_repeat 1 37 0 4 1300 285 304 59 68 chr13 93804036 93804114 -26480198 + L2a LINE L2 3207 3285 -141 4 1300 1342 211 125 6 chr13 93804114 93804443 -26479869 - ORR1D2 LTR MaLR 0 370 3 4 1300 285 304 59 68 chr13 93804443 93804586 -26479726 + L2a LINE L2 3286 3426 0 4 1300 3491 25 2 2 chr13 93805023 93805419 -26478893 - MTA_Mm LTR MaLR 0 396 1 4 1300 237 324 70 28 chr13 93807417 93807560 -26476752 + LTR85c LTR Gypsy? 59 207 -616 4 1300 382 241 0 69 chr13 93807817 93807831 -26476481 - ID_B1 SINE B4 -22 202 95 4 1300 689 108 0 0 chr13 93807831 93807933 -26476379 - B1_Mur4 SINE Alu -34 116 15 4 1300 465 19 0 0 chr13 93808594 93808648 -26475664 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 4 1300 200 204 0 0 chr13 93809258 93809307 -26475005 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 4 1300 315 202 0 0 chr13 93809308 93809392 -26474920 + GA-rich Low_complexity Low_complexity 2 85 0 4 1300 759 188 0 15 chr13 93810122 93810257 -26474055 + B1_Mur1 SINE Alu 2 134 -15 4 1300 222 222 0 0 chr13 93810258 93810312 -26474000 + GA-rich Low_complexity Low_complexity 1 54 0 4 1300 1258 35 0 0 chr13 93812460 93812604 -26471708 + B1_Mus1 SINE Alu 1 144 -4 4 1300 1301 161 31 31 chr13 93812807 93813032 -26471280 - URR1B DNA MER1_type 0 225 1 4 1300 368 312 29 7 chr13 93814373 93814512 -26469800 - RSINE1 SINE B4 -12 153 12 4 1300 594 279 98 5 chr13 93815157 93815362 -26468950 - MER58A DNA MER1_type 0 224 1 4 1300 376 273 50 0 chr13 93816415 93816536 -26467776 - B1F1 SINE Alu -20 129 3 4 1300 2994 88 0 7 chr13 93817217 93817628 -26466684 - Lx2 LINE L1 0 6997 6590 4 1300 1000 192 11 11 chr13 93817662 93817846 -26466466 - B3A SINE B2 -14 184 1 4 1300 185 304 56 28 chr13 93817898 93817969 -26466343 - L2b LINE L2 -15 3360 3288 4 1300 312 215 0 0 chr13 93818264 93818371 -26465941 + GA-rich Low_complexity Low_complexity 1 107 0 4 1300 248 314 29 0 chr13 93819782 93819884 -26464428 - MER5B DNA MER1_type -69 109 5 4 1300 243 0 0 0 chr13 93820365 93820392 -26463920 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 4 1300 313 281 0 59 chr13 93821376 93821478 -26462834 - PB1D10 SINE Alu -5 112 17 4 1300 570 15 0 0 chr13 93821755 93821822 -26462490 + (TG)n Simple_repeat Simple_repeat 1 67 0 4 1300 22 0 0 0 chr13 93822008 93822030 -26462282 + AT_rich Low_complexity Low_complexity 1 22 0 4 1300 286 321 56 9 chr13 93822722 93822829 -26461483 + PB1D10 SINE Alu 1 112 -5 4 1300 405 0 0 0 chr13 93823309 93823354 -26460958 + (GA)n Simple_repeat Simple_repeat 1 45 0 4 1300 235 282 25 13 chr13 93823449 93823528 -26460784 + ID4 SINE ID 1 80 -3 4 1300 573 289 0 47 chr13 93824053 93824202 -26460110 + B1F2 SINE Alu 1 142 -7 4 1300 484 56 28 0 chr13 93824321 93824393 -26459919 + (TA)n Simple_repeat Simple_repeat 2 75 0 4 1300 697 233 64 64 chr13 93824592 93824780 -26459532 + B3 SINE B2 5 192 -24 4 1300 506 99 0 24 chr13 93824782 93824865 -26459447 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 4 1300 919 32 32 0 chr13 93824971 93825096 -26459216 + (GAAA)n Simple_repeat Simple_repeat 1 129 0 4 1300 677 97 10 0 chr13 93825098 93825201 -26459111 + (GGAA)n Simple_repeat Simple_repeat 1 104 0 4 1300 372 344 71 13 chr13 93825328 93825552 -26458760 + L1MC LINE L1 5497 5733 -2149 4 1300 569 225 35 7 chr13 93826434 93826577 -26457735 - B1F SINE Alu -2 147 1 4 1300 247 180 0 16 chr13 93826682 93826710 -26457602 + A-rich Low_complexity Low_complexity 5 32 0 4 1300 502 241 17 0 chr13 93826710 93826826 -26457486 + PB1D7 SINE Alu 1 118 -2 4 1300 247 180 0 16 chr13 93826826 93826859 -26457453 + A-rich Low_complexity Low_complexity 33 64 0 4 1300 299 340 60 24 chr13 93827451 93827617 -26456695 + L4 LINE RTE 1604 1775 -254 4 1300 271 189 26 39 chr13 93829025 93829102 -26455210 + (CCCCAG)n Simple_repeat Simple_repeat 4 79 0 4 1300 183 240 60 0 chr13 93831711 93831761 -26452551 + MIRb SINE MIR 48 100 -168 4 1300 193 286 14 0 chr13 93831931 93832001 -26452311 - MIRc SINE MIR -13 255 185 4 1300 306 107 0 0 chr13 93833667 93833723 -26450589 + (A)n Simple_repeat Simple_repeat 1 56 0 4 1300 386 200 174 43 chr13 93833989 93834104 -26450208 - ID_B1 SINE B4 -7 217 88 4 1300 1259 92 158 5 chr13 93834506 93834702 -26449610 - URR1A DNA MER1_type 0 226 1 4 1300 216 0 0 0 chr13 93834905 93834929 -26449383 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1300 263 231 31 0 chr13 93834975 93835040 -26449272 - ID4_ SINE ID -16 67 1 4 1300 22 0 0 0 chr13 93836424 93836446 -26447866 + AT_rich Low_complexity Low_complexity 1 22 0 4 1300 236 309 62 0 chr13 93836515 93836612 -26447700 - PB1D9 SINE Alu -7 113 11 4 1300 188 281 71 24 chr13 93837221 93837305 -26447007 + MIR SINE MIR 52 139 -123 4 1300 665 173 16 8 chr13 93837330 93837458 -26446854 + RMER15 LTR ERVL 1 129 -446 4 1300 2122 188 26 9 chr13 93837498 93837927 -26446385 + RMER15 LTR ERVL 123 558 -17 4 1300 752 278 19 0 chr13 93838098 93838307 -26446005 + ID_B1 SINE B4 12 224 0 4 1300 479 296 16 59 chr13 93838384 93838571 -26445741 + L4 LINE RTE 1209 1387 -642 4 1300 37 23 0 0 chr13 93839107 93839151 -26445161 + AT_rich Low_complexity Low_complexity 1 44 0 4 1300 246 32 0 0 chr13 93840219 93840250 -26444062 + (TG)n Simple_repeat Simple_repeat 2 32 0 4 1300 1003 115 229 0 chr13 93840858 93841041 -26443271 - URR1A DNA MER1_type -1 225 1 4 1300 396 346 0 0 chr13 93841805 93841912 -26442400 + PB1D10 SINE Alu 4 110 -7 4 1300 602 278 157 46 chr13 93841933 93841984 -26442328 + L1MB2 LINE L1 5703 5768 -403 4 1300 330 26 0 0 chr13 93841984 93842023 -26442289 + (TGGA)n Simple_repeat Simple_repeat 4 42 0 4 1300 602 278 157 46 chr13 93842023 93842341 -26441971 + L1MB2 LINE L1 5769 6113 -58 4 1300 460 196 27 36 chr13 93842351 93842462 -26441850 + PB1D9 SINE Alu 3 112 -8 4 1300 183 80 0 0 chr13 93842474 93842499 -26441813 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1300 745 235 22 7 chr13 93842547 93842762 -26441550 - B3A SINE B2 0 216 1 4 1300 244 228 0 34 chr13 93844845 93844904 -26439408 - L2b LINE L2 -29 3346 3290 4 1300 290 344 117 52 chr13 93845186 93845588 -26438724 + L2a LINE L2 2982 3409 -17 4 1300 1043 202 14 24 chr13 93846210 93846423 -26437889 + B3 SINE B2 2 212 -4 4 1300 1228 61 30 0 chr13 93846888 93847052 -26437260 + B2_Mm2 SINE B2 1 169 -26 4 1300 278 138 17 0 chr13 93847065 93847123 -26437189 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 162 4576 139 139 23 chr13 93847123 93848044 -26436268 - RLTR25B LTR ERVK 0 1028 1 4 1301 213 132 26 0 chr13 93848044 93848082 -26436230 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1301 2253 172 3 31 chr13 93848180 93848565 -26435747 + Lx6 LINE L1 6393 6766 -694 4 1301 1190 261 11 14 chr13 93848561 93848848 -26435464 + Lx6 LINE L1 7006 7291 -169 4 1301 363 23 0 0 chr13 93848849 93848893 -26435419 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 4 1301 326 268 47 8 chr13 93848932 93849060 -26435252 + Lx7 LINE L1 7189 7321 -375 4 1301 207 259 0 67 chr13 93849065 93849185 -26435127 + T-rich Low_complexity Low_complexity 4 115 0 4 1301 21 57 0 0 chr13 93849292 93849327 -26434985 + AT_rich Low_complexity Low_complexity 1 35 0 4 1301 554 165 73 0 chr13 93850037 93850146 -26434166 - B1_Mus2 SINE Alu 0 147 31 4 1301 454 129 12 12 chr13 93851171 93851257 -26433055 + GA-rich Low_complexity Low_complexity 1 86 0 4 1301 328 257 19 38 chr13 93852906 93853011 -26431301 - PB1D10 SINE Alu -1 116 14 4 1301 189 132 0 0 chr13 93854300 93854338 -26429974 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1301 202 133 82 16 chr13 93854361 93854422 -26429890 + (CATA)n Simple_repeat Simple_repeat 2 66 0 4 1301 1263 77 71 16 chr13 93854668 93854852 -26429460 - B2_Mm2 SINE B2 0 195 2 4 1301 469 275 29 14 chr13 93854991 93855131 -26429181 + B4 SINE B4 1 142 -150 4 1301 593 214 23 15 chr13 93855336 93855469 -26428843 - B4 SINE B4 -21 271 138 4 1301 2488 153 174 2 chr13 93855463 93855962 -26428350 - RMER20B LTR ERVK -42 585 1 4 1301 896 172 47 56 chr13 93856043 93856258 -26428054 + RLTR20B3 LTR ERVK 6 218 -359 4 1301 293 0 27 0 chr13 93856258 93856295 -26428017 + (GGGA)n Simple_repeat Simple_repeat 3 40 0 4 1301 1322 205 116 14 chr13 93856295 93856672 -26427640 + RLTR20B3 LTR ERVK 140 561 -16 4 1301 901 202 119 11 chr13 93857324 93857509 -26426803 - B3 SINE B2 -11 205 1 4 1301 180 0 0 0 chr13 93857802 93857822 -26426490 + (CAT)n Simple_repeat Simple_repeat 2 21 0 4 1301 276 224 0 175 chr13 93858398 93858587 -26425725 + (TGGG)n Simple_repeat Simple_repeat 3 158 0 4 1301 37 23 0 0 chr13 93868403 93868447 -26415865 + AT_rich Low_complexity Low_complexity 1 44 0 4 1301 416 248 57 28 chr13 93869606 93869747 -26414565 + MIR SINE MIR 118 262 0 4 1301 187 331 51 101 chr13 93870347 93870525 -26413787 - MER5B DNA MER1_type -3 175 7 4 1301 420 20 0 0 chr13 93871411 93871460 -26412852 + (TA)n Simple_repeat Simple_repeat 1 49 0 4 1301 2173 151 59 0 chr13 93871840 93872197 -26412115 - ORR1C1 LTR MaLR 0 378 1 4 1301 1988 112 0 75 chr13 93872791 93873138 -26411174 + ORR1B1 LTR MaLR 66 386 -8 4 1301 474 271 80 0 chr13 93873238 93873416 -26410896 - L1MEg LINE L1 -2463 4543 4352 5 1301 591 302 27 27 chr13 93874029 93874325 -26409987 - L1MEg LINE L1 -3056 3950 3655 5 1301 1305 110 85 0 chr13 93874371 93874571 -26409741 - Lx2 LINE L1 -6 6991 6775 5 1301 7375 121 1 1 chr13 93874571 93875927 -26408385 - Lx2 LINE L1 -363 6634 5279 5 1301 2995 50 42 10 chr13 93875927 93876310 -26408002 - MTA_Mm LTR MaLR 0 396 2 5 1301 7796 78 9 69 chr13 93876311 93877480 -26406832 - MTA_Mm-int LTR MaLR 0 1098 1 5 1301 3398 35 5 2 chr13 93877480 93877875 -26406437 - MTA_Mm LTR MaLR 0 396 1 5 1301 1219 41 7 0 chr13 93877918 93878065 -26406247 + B1_Mus1 SINE Alu 1 148 0 5 1301 222 62 0 0 chr13 93878065 93878097 -26406215 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1301 533 329 85 64 chr13 93878108 93878592 -26405720 - L1MEg LINE L1 -3400 3606 3113 5 1301 3787 37 5 0 chr13 93878624 93879058 -26405254 + RLTR10C LTR ERVK 1 436 0 5 1301 2743 87 53 3 chr13 93879058 93879438 -26404874 + MMERVK10C-int LTR ERVK 1 399 -7182 5 1301 42670 41 0 1 chr13 93879436 93884380 -26399932 + MMERVK10C-int LTR ERVK 870 5810 -1771 5 1301 8055 33 12 1 chr13 93884371 93885292 -26399020 + MMERVK10C-int LTR ERVK 6651 7581 0 5 1301 3767 39 5 0 chr13 93885292 93885726 -26398586 + RLTR10C LTR ERVK 1 436 0 5 1301 1815 164 32 26 chr13 93885726 93886065 -26398247 + ORR1D1 LTR MaLR 26 366 -8 5 1301 1376 274 100 32 chr13 93886100 93886892 -26397420 - L1MEg LINE L1 -3986 3116 2126 5 1301 22 0 0 0 chr13 93887530 93887552 -26396760 + AT_rich Low_complexity Low_complexity 1 22 0 5 1301 3788 284 49 16 chr13 93887691 93888851 -26395461 - Lx8 LINE L1 -178 7295 6097 5 1301 592 271 144 12 chr13 93889233 93889483 -26394829 + B4A SINE B4 2 284 -8 5 1301 782 253 62 21 chr13 93889603 93889797 -26394515 + B3 SINE B2 1 202 -14 5 1301 21 36 0 0 chr13 93890374 93890402 -26393910 + AT_rich Low_complexity Low_complexity 1 28 0 5 1301 638 234 7 41 chr13 93890495 93890642 -26393670 + B1_Mur3 SINE Alu 6 147 -2 5 1301 417 20 0 0 chr13 93891280 93891330 -26392982 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 5 1301 198 71 0 0 chr13 93891330 93891357 -26392955 + (TG)n Simple_repeat Simple_repeat 1 28 0 5 1301 601 319 0 41 chr13 93891358 93891505 -26392807 - RSINE1 SINE B4 -23 142 2 5 1301 456 222 182 15 chr13 93891711 93891848 -26392464 + B3A SINE B2 1 160 -38 5 1301 377 320 93 54 chr13 93892748 93892953 -26391359 + LTR79 LTR ERVL 282 494 -33 5 1301 2035 173 47 20 chr13 93893570 93893976 -26390336 + MTC LTR MaLR 5 421 0 5 1301 1030 189 0 16 chr13 93894015 93894203 -26390109 - RLTR16 LTR ERVK -1 504 320 5 1301 1793 197 189 16 chr13 93895164 93895603 -26388709 + RMER15 LTR ERVL 61 575 0 5 1301 772 249 100 68 chr13 93896103 93896383 -26387929 + B4A SINE B4 4 292 0 5 1301 665 106 10 0 chr13 93896565 93896669 -26387643 + (TC)n Simple_repeat Simple_repeat 2 106 0 5 1301 256 310 84 0 chr13 93896915 93896986 -26387326 - PB1D7 SINE Alu -29 91 15 5 1301 2342 139 15 47 chr13 93897222 93897629 -26386683 - ORR1B1 LTR MaLR 0 394 1 5 1301 284 242 154 87 chr13 93897636 93897740 -26386572 + PB1D7 SINE Alu 3 113 -7 5 1301 279 306 0 0 chr13 93897744 93897816 -26386496 + ID4 SINE ID 2 73 -10 5 1301 234 0 0 0 chr13 93897817 93897843 -26386469 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 1301 266 319 8 25 chr13 93897895 93898014 -26386298 + PB1D10 SINE Alu 1 117 0 5 1301 21 0 0 0 chr13 93898068 93898089 -26386223 + AT_rich Low_complexity Low_complexity 1 21 0 5 1301 267 329 14 0 chr13 93898093 93898166 -26386146 + ID4 SINE ID 8 81 -2 5 1301 297 259 23 12 chr13 93898930 93899016 -26385296 + MTEa LTR MaLR 8 94 -285 5 1301 366 303 52 7 chr13 93899176 93899329 -26384983 + MT2A LTR ERVL 303 462 -71 5 1301 226 302 103 9 chr13 93900048 93900155 -26384157 - Charlie1a DNA MER1_type -435 1020 904 5 1301 450 234 18 18 chr13 93900353 93900466 -26383846 + PB1D10 SINE Alu 5 117 0 5 1301 196 353 58 12 chr13 93900916 93901002 -26383310 + MIRc SINE MIR 2 91 -177 5 1301 470 299 112 54 chr13 93901067 93901325 -26382987 + MLT1A0 LTR MaLR 91 363 -2 5 1301 254 286 163 0 chr13 93901419 93901517 -26382795 + Tigger5 DNA MER2_type 5 118 -2288 5 1301 408 55 0 0 chr13 93901690 93901745 -26382567 + (TATG)n Simple_repeat Simple_repeat 3 57 0 5 1301 659 233 92 0 chr13 93901747 93901910 -26382402 - B3A SINE B2 -18 180 3 5 1301 547 230 53 65 chr13 93902766 93903012 -26381300 - L1MB8 LINE L1 -190 5988 5746 5 1301 2841 55 0 0 chr13 93903102 93903448 -26380864 + ORR1A1 LTR MaLR 1 346 0 5 1301 6099 34 3 1 chr13 93904293 93905021 -26379291 - L1Md_T LINE L1 0 6582 5854 5 1301 629 215 31 0 chr13 93905229 93905359 -26378953 + B1F SINE Alu 11 144 -5 5 1301 284 275 40 66 chr13 93905230 93905382 -26378930 + B4A SINE B4 94 241 -51 5 1301 235 188 28 28 chr13 93905383 93905454 -26378858 + Lx8 LINE L1 7397 7467 -6 5 1301 28 0 0 0 chr13 93905454 93905482 -26378830 + AT_rich Low_complexity Low_complexity 1 28 0 5 1301 26 50 0 0 chr13 93905787 93905827 -26378485 + AT_rich Low_complexity Low_complexity 1 40 0 5 1301 682 245 49 22 chr13 93905828 93906038 -26378274 + B3A SINE B2 2 216 0 5 1301 252 360 60 13 chr13 93906107 93906256 -26378056 + MIR SINE MIR 23 178 -84 5 1301 312 238 164 46 chr13 93907294 93907532 -26376780 + MER33 DNA MER1_type 20 285 -39 5 1301 855 166 22 0 chr13 93907534 93907673 -26376639 + B1_Mur4 SINE Alu 2 143 -7 5 1301 525 104 0 0 chr13 93907675 93907752 -26376560 + (GGAA)n Simple_repeat Simple_repeat 3 79 0 5 1301 244 196 39 0 chr13 93907775 93907826 -26376486 + MER33 DNA MER1_type 272 324 0 5 1301 503 252 119 39 chr13 93908986 93909246 -26375066 - B4A SINE B4 -11 281 1 5 1301 356 279 296 27 chr13 93909286 93909651 -26374661 + L2a LINE L2 2950 3412 -14 5 1301 414 0 0 0 chr13 93910674 93910720 -26373592 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 5 1301 844 226 122 0 chr13 93910727 93910948 -26373364 - MTD LTR MaLR 0 419 172 5 1301 921 276 67 20 chr13 93911215 93911470 -26372842 + B4A SINE B4 4 270 -22 5 1301 441 54 0 0 chr13 93911471 93911527 -26372785 + (CA)n Simple_repeat Simple_repeat 2 57 0 5 1301 1001 121 182 10 chr13 93911670 93911862 -26372450 - URR1B DNA MER1_type 0 225 1 5 1301 264 175 17 17 chr13 93912037 93912095 -26372217 + MIRb SINE MIR 177 234 -34 5 1301 577 284 96 88 chr13 93913082 93913321 -26370991 - B4 SINE B4 -49 243 3 5 1301 315 0 0 0 chr13 93913552 93913587 -26370725 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1301 304 269 36 19 chr13 93913654 93913772 -26370540 - PB1D10 SINE Alu -7 120 2 5 1301 186 103 0 0 chr13 93914043 93914072 -26370240 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 5 1301 271 250 0 0 chr13 93914323 93914407 -26369905 + CT-rich Low_complexity Low_complexity 2 85 0 5 1301 273 237 52 13 chr13 93915547 93915624 -26368688 + ID4 SINE ID 4 83 0 5 1301 32 43 0 0 chr13 93917779 93917825 -26366487 + AT_rich Low_complexity Low_complexity 1 46 0 5 1301 377 197 15 29 chr13 93918963 93919031 -26365281 - ID4 SINE ID 0 83 17 5 1301 306 0 0 0 chr13 93919333 93919367 -26364945 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1301 621 273 0 0 chr13 93919374 93919513 -26364799 - RSINE1 SINE B4 -25 140 2 5 1301 1182 71 0 0 chr13 93919812 93919967 -26364345 + B2_Mm2 SINE B2 1 155 -40 5 1301 436 204 10 51 chr13 93919941 93920039 -26364273 + B1_Mm SINE Alu 38 131 -16 5 1301 419 225 243 45 chr13 93921268 93921445 -26362867 - ID_B1 SINE B4 -11 213 2 5 1301 25 0 0 0 chr13 93921758 93921783 -26362529 + AT_rich Low_complexity Low_complexity 1 25 0 5 1301 481 257 19 0 chr13 93922071 93922176 -26362136 + PB1D10 SINE Alu 9 115 -2 5 1301 368 338 22 0 chr13 93922539 93922678 -26361634 - ID_B1 SINE B4 -12 212 71 5 1301 256 196 0 0 chr13 93922675 93922721 -26361591 - PB1D10 SINE Alu -29 88 43 5 1301 391 271 76 8 chr13 93922781 93922900 -26361412 - PB1 SINE Alu 0 127 1 5 1301 21 0 0 0 chr13 93922900 93922921 -26361391 + AT_rich Low_complexity Low_complexity 1 21 0 5 1301 498 248 66 8 chr13 93923424 93923546 -26360766 + RSINE1 SINE B4 2 130 -35 5 1301 460 234 0 27 chr13 93923554 93923664 -26360648 + B4A SINE B4 1 107 -185 5 1301 989 223 14 19 chr13 93923758 93923968 -26360344 + B4A SINE B4 84 292 0 5 1301 185 220 78 20 chr13 93923976 93924027 -26360285 + MIRb SINE MIR 38 91 -177 5 1301 513 316 16 16 chr13 93924479 93924669 -26359643 + B3A SINE B2 5 194 -4 5 1301 198 71 0 0 chr13 93925439 93925467 -26358845 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1301 1231 70 58 0 chr13 93926328 93926500 -26357812 + B2_Mm1t SINE B2 2 183 -10 5 1301 459 281 26 0 chr13 93927657 93927771 -26356541 - PB1D10 SINE Alu 0 117 1 5 1301 1161 43 0 0 chr13 93928760 93928898 -26355414 - B1_Mus2 SINE Alu -9 138 1 5 1301 777 282 14 5 chr13 93930293 93930510 -26353802 - ID_B1 SINE B4 -1 223 5 5 1301 46 68 0 0 chr13 93931255 93931343 -26352969 + AT_rich Low_complexity Low_complexity 1 88 0 5 1301 1070 175 243 39 chr13 93931459 93931768 -26352544 + ORR1D1 LTR MaLR 3 374 0 5 1301 4118 224 92 122 chr13 93931768 93932152 -26352160 + ORR1D1-int LTR MaLR 1 385 -985 5 1301 1145 29 7 0 chr13 93932152 93932288 -26352024 - B1_Mus2 SINE Alu -9 138 2 5 1301 4118 224 92 122 chr13 93932288 93933311 -26351001 + ORR1D1-int LTR MaLR 386 1366 -4 5 1301 614 243 215 11 chr13 93933315 93933600 -26350712 + ORR1D1 LTR MaLR 1 349 -21 5 1301 22 35 0 0 chr13 93933835 93933864 -26350448 + AT_rich Low_complexity Low_complexity 1 29 0 5 1301 21 0 0 0 chr13 93934757 93934778 -26349534 + AT_rich Low_complexity Low_complexity 1 21 0 5 1301 1116 54 7 20 chr13 93934977 93935127 -26349185 + B1_Mus1 SINE Alu 1 148 0 5 1301 1733 162 70 13 chr13 93935417 93935804 -26348508 - RMER17C LTR ERVK 0 410 2 5 1301 1369 71 33 5 chr13 93936006 93936190 -26348122 + B2_Mm2 SINE B2 1 189 -6 5 1301 216 0 0 0 chr13 93936364 93936388 -26347924 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 5 1301 673 327 88 0 chr13 93936756 93936973 -26347339 - 7SK RNA RNA -87 244 9 5 1301 456 275 288 56 chr13 93937164 93937505 -26346807 + RMER21B LTR ERV1 299 718 -124 5 1301 1156 75 0 0 chr13 93939371 93939518 -26344794 + B1_Mm SINE Alu 1 147 0 6 1301 440 274 43 36 chr13 93940061 93940201 -26344111 + MER82 DNA MER2_type 392 532 -121 6 1301 1438 65 16 0 chr13 93940359 93940543 -26343769 + B2_Mm2 SINE B2 1 187 -8 6 1301 847 211 139 0 chr13 93941015 93941209 -26343103 + URR1B DNA MER1_type 1 221 -4 6 1301 452 322 47 17 chr13 93941340 93941522 -26342790 + ID_B1 SINE B4 43 224 0 6 1301 508 162 19 0 chr13 93941524 93941629 -26342683 + GA-rich Low_complexity Low_complexity 3 109 0 6 1301 291 159 30 5 chr13 93941966 93942033 -26342279 + B1_Mus2 SINE Alu 37 132 -15 6 1301 626 240 16 54 chr13 93942539 93942724 -26341588 + B3A SINE B2 19 196 -2 6 1301 786 311 30 72 chr13 93942889 93942984 -26341328 - B4A SINE B4 0 292 205 6 1301 1086 102 0 7 chr13 93942984 93943132 -26341180 + B1_Mus2 SINE Alu 1 147 0 6 1301 786 311 30 72 chr13 93943132 93943341 -26340971 - B4A SINE B4 -88 204 1 6 1301 259 214 75 43 chr13 93943812 93943905 -26340407 + RMER21B LTR ERV1 86 181 -661 6 1301 363 295 77 8 chr13 93944329 93944459 -26339853 + B1F1 SINE Alu 11 149 0 6 1301 22 0 0 0 chr13 93945951 93945973 -26338339 + AT_rich Low_complexity Low_complexity 1 22 0 6 1301 346 355 24 53 chr13 93946018 93946226 -26338086 + MER58C DNA MER1_type 13 214 -1 6 1301 23 0 0 0 chr13 93946495 93946518 -26337794 + AT_rich Low_complexity Low_complexity 1 23 0 6 1301 791 188 27 20 chr13 93947085 93947247 -26337065 + ID_B1 SINE B4 80 243 -49 6 1301 431 363 65 0 chr13 93948059 93948227 -26336085 + MER20 DNA MER1_type 18 196 -23 6 1301 243 0 0 0 chr13 93948352 93948379 -26335933 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1301 316 111 16 16 chr13 93948385 93948449 -26335863 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 1301 21 36 0 0 chr13 93948699 93948727 -26335585 + AT_rich Low_complexity Low_complexity 1 28 0 6 1301 419 212 40 40 chr13 93948843 93948960 -26335352 + PB1D7 SINE Alu 1 120 0 6 1301 21 0 0 0 chr13 93949020 93949041 -26335271 + AT_rich Low_complexity Low_complexity 1 21 0 6 1301 21 0 0 0 chr13 93949233 93949254 -26335058 + AT_rich Low_complexity Low_complexity 1 21 0 6 1301 231 312 71 20 chr13 93949420 93949518 -26334794 + MER58B DNA MER1_type 5 107 -234 6 1301 486 239 33 0 chr13 93949727 93949819 -26334493 + PB1D7 SINE Alu 13 107 -13 6 1301 227 324 54 0 chr13 93950277 93950351 -26333961 + MIRc SINE MIR 47 124 -144 6 1301 489 254 9 0 chr13 93950475 93950585 -26333727 + PB1D10 SINE Alu 1 111 -6 6 1301 324 198 12 0 chr13 93951270 93951351 -26332961 + L1MB7 LINE L1 4961 5042 -1104 6 1301 409 244 12 0 chr13 93951366 93951448 -26332864 + B1F2 SINE Alu 52 134 -15 6 1301 252 86 0 0 chr13 93951449 93951484 -26332828 + (TAGG)n Simple_repeat Simple_repeat 3 37 0 6 1301 689 229 49 29 chr13 93951550 93951856 -26332456 + L1MB7 LINE L1 5084 5395 -751 6 1301 1127 95 0 0 chr13 93951857 93952005 -26332307 + B1_Mus1 SINE Alu 1 148 0 6 1301 1156 65 148 6 chr13 93952126 93952295 -26332017 + B2_Mm2 SINE B2 1 193 -2 6 1301 1197 133 16 0 chr13 93952301 93952489 -26331823 + B2_Mm1t SINE B2 1 191 -2 6 1301 261 344 0 0 chr13 93952502 93952566 -26331746 + ID4_ SINE ID 19 82 -1 6 1301 590 266 112 22 chr13 93952571 93952882 -26331430 + L1MB7 LINE L1 5480 5818 -366 6 1301 414 189 32 43 chr13 93952882 93952976 -26331336 + PB1D10 SINE Alu 24 116 -1 6 1301 308 278 366 9 chr13 93952979 93953197 -26331115 + L1MB7 LINE L1 5845 6140 -44 6 1301 210 222 67 0 chr13 93953198 93953243 -26331069 + PB1D10 SINE Alu 65 112 -5 6 1301 597 237 22 29 chr13 93953617 93953756 -26330556 + B1_Mur3 SINE Alu 5 142 -7 6 1301 195 42 0 0 chr13 93953758 93953782 -26330530 + (CCA)n Simple_repeat Simple_repeat 1 24 0 6 1301 207 0 0 0 chr13 93953784 93953807 -26330505 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 6 1301 251 279 15 0 chr13 93955032 93955100 -26329212 + ID4 SINE ID 14 82 -1 6 1301 25 0 0 0 chr13 93955398 93955423 -26328889 + AT_rich Low_complexity Low_complexity 1 25 0 6 1301 1097 70 111 6 chr13 93955983 93956155 -26328157 + B2_Mm2 SINE B2 2 191 -4 6 1301 357 288 101 20 chr13 93957508 93957657 -26326655 + HAL1 LINE L1 1404 1564 -943 6 1301 351 281 87 53 chr13 93957738 93957784 -26326528 + ID_B1 SINE B4 43 222 -68 6 1301 487 246 79 8 chr13 93957784 93957911 -26326401 + B1F2 SINE Alu 9 144 -5 6 1301 1085 39 0 0 chr13 93958008 93958137 -26326175 + B1_Mus1 SINE Alu 1 129 -19 6 1301 693 97 0 0 chr13 93958137 93958240 -26326072 + (GAAA)n Simple_repeat Simple_repeat 3 105 0 6 1301 765 159 42 47 chr13 93958242 93958433 -26325879 + L1_Rod LINE L1 5353 5542 -305 6 1301 869 162 28 0 chr13 93958433 93958575 -26325737 + B1_Mm SINE Alu 1 146 -1 6 1301 234 0 0 0 chr13 93958804 93958830 -26325482 + (A)n Simple_repeat Simple_repeat 1 26 0 6 1301 250 322 43 11 chr13 93959333 93959427 -26324885 + PB1D7 SINE Alu 2 98 -22 6 1301 308 325 57 8 chr13 93959345 93959469 -26324843 + ID_B1 SINE B4 95 224 0 6 1301 351 252 0 65 chr13 93959482 93959605 -26324707 + PB1D10 SINE Alu 1 115 -2 6 1301 319 256 61 0 chr13 93959608 93959690 -26324622 + B3 SINE B2 2 88 -128 6 1301 504 158 74 0 chr13 93959986 93960081 -26324231 - B1_Mur4 SINE Alu -2 148 47 6 1301 648 228 0 57 chr13 93960362 93960520 -26323792 + B1_Mur1 SINE Alu 1 149 0 6 1301 219 216 44 22 chr13 93962949 93963039 -26321273 + T-rich Low_complexity Low_complexity 3 94 0 6 1301 675 24 0 0 chr13 93963041 93963125 -26321187 - B1_Mm SINE Alu 0 147 64 6 1301 353 326 29 29 chr13 93963297 93963436 -26320876 - L1M5 LINE L1 -3372 2774 2636 6 1301 1154 75 0 0 chr13 93963515 93963662 -26320650 + B1_Mus2 SINE Alu 1 147 0 6 1301 287 254 0 0 chr13 93963673 93963728 -26320584 + ID4_ SINE ID 26 80 -3 6 1301 236 309 48 24 chr13 93963986 93964069 -26320243 - MTE2a LTR MaLR -35 344 260 6 1301 450 260 72 42 chr13 93964277 93964514 -26319798 + L1_Rod LINE L1 5309 5552 -328 6 1301 240 32 0 0 chr13 93964538 93964569 -26319743 + RLTR1B LTR ERV1 1 31 -481 6 1301 21 45 0 22 chr13 93964569 93964587 -26319725 + AT_rich Low_complexity Low_complexity 1 18 0 6 1301 1248 41 0 0 chr13 93964587 93964734 -26319578 - B1_Mm SINE Alu 0 147 1 6 1301 21 45 0 22 chr13 93964734 93964761 -26319551 + AT_rich Low_complexity Low_complexity 1 27 0 6 1301 724 136 79 111 chr13 93964761 93964951 -26319361 - MT2A LTR ERVL -2 531 348 6 1301 934 206 131 14 chr13 93964970 93965191 -26319121 - MT2A LTR ERVL -261 272 26 6 1301 7587 184 41 30 chr13 93965243 93966169 -26318143 + L1_Mur3 LINE L1 2394 3348 -2532 6 1301 1473 47 0 35 chr13 93966169 93966369 -26317943 + B2_Mm2 SINE B2 2 194 -1 6 1301 7587 184 41 30 chr13 93966369 93966623 -26317689 + L1_Mur3 LINE L1 3349 3595 -2285 6 1301 1560 47 5 0 chr13 93966623 93966813 -26317499 - B2_Mm1t SINE B2 -2 191 1 6 1301 7587 184 41 30 chr13 93966813 93966903 -26317409 + L1_Mur3 LINE L1 3596 3686 -2194 6 1301 3523 25 136 0 chr13 93966903 93967337 -26316975 - MT2_Mm LTR ERVL 0 493 1 6 1301 7587 184 41 30 chr13 93967337 93967941 -26316371 + L1_Mur3 LINE L1 3687 4290 -1590 6 1301 532 272 48 48 chr13 93968009 93968198 -26316114 + B4A SINE B4 2 190 -102 6 1301 305 292 6 67 chr13 93968353 93968504 -26315808 + L1MD2 LINE L1 5463 5608 -556 6 1301 3233 47 5 0 chr13 93968568 93968951 -26315361 + IAPEY_LTR LTR ERVK 1 385 0 6 1301 1185 62 0 18 chr13 93968951 93969116 -26315196 + IAPEy-int LTR ERVK 1 162 -7351 6 1301 2685 138 16 16 chr13 93969113 93969630 -26314682 + IAPEy-int LTR ERVK 542 1058 -6455 6 1301 20361 46 14 6 chr13 93969630 93972319 -26311993 + IAPEy-int LTR ERVK 4804 7513 0 6 1301 3265 47 3 0 chr13 93972319 93972703 -26311609 + IAPEY_LTR LTR ERVK 1 385 0 6 1301 445 290 61 45 chr13 93972779 93973037 -26311275 + L1MD2 LINE L1 5635 5904 -455 6 1301 299 200 176 0 chr13 93973271 93973356 -26310956 - Charlie1a DNA MER1_type -569 886 787 6 1301 402 294 0 10 chr13 93973349 93973452 -26310860 + MTEb LTR MaLR 73 174 -205 6 1301 342 207 36 24 chr13 93973504 93973588 -26310724 + MTEb LTR MaLR 258 342 -37 6 1301 345 100 0 0 chr13 93973712 93973762 -26310550 + (TTCC)n Simple_repeat Simple_repeat 3 52 0 6 1301 423 0 0 0 chr13 93973767 93973814 -26310498 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1301 714 173 94 0 chr13 93973814 93973941 -26310371 - B1_Mur2 SINE Alu -10 139 1 6 1301 453 252 46 30 chr13 93974159 93974290 -26310022 + B1F2 SINE Alu 17 149 0 6 1301 291 276 13 13 chr13 93974318 93974395 -26309917 + ID4_ SINE ID 6 82 -1 6 1301 459 245 170 31 chr13 93974617 93974811 -26309501 - RMER15 LTR ERVL -320 255 35 6 1301 265 266 15 45 chr13 93974840 93974907 -26309405 - RMER15 LTR ERVL -510 65 1 6 1301 260 318 16 0 chr13 93974937 93975000 -26309312 + LTR16B1 LTR ERVL 187 250 -230 6 1301 246 62 0 0 chr13 93975064 93975096 -26309216 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1301 261 0 0 0 chr13 93975096 93975124 -26309188 + (GA)n Simple_repeat Simple_repeat 2 30 0 6 1301 301 215 0 60 chr13 93975656 93975748 -26308564 + RMER20B LTR ERVK 76 161 -355 6 1301 841 49 189 0 chr13 93976077 93976199 -26308113 - B1_Mm SINE Alu -1 146 2 6 1301 189 68 44 22 chr13 93976341 93976386 -26307926 + (TA)n Simple_repeat Simple_repeat 1 46 0 6 1301 1197 78 97 10 chr13 93976444 93976639 -26307673 - Lx2 LINE L1 -11 6986 6775 6 1301 4707 109 37 9 chr13 93976639 93977396 -26306916 - Lx2 LINE L1 -354 6643 5866 6 1301 271 0 0 49 chr13 93977396 93977437 -26306875 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6 1301 1090 23 0 0 chr13 93977437 93977567 -26306745 - B1_Mm SINE Alu -9 138 9 6 1301 630 195 17 47 chr13 93977567 93977608 -26306704 - ID_B1 SINE B4 -75 217 48 6 1301 823 91 8 0 chr13 93977608 93977729 -26306583 - Lx2 LINE L1 -1153 5844 5723 6 162 8613 75 9 9 chr13 93977726 93978847 -26305465 - L1VL4 LINE L1 -1425 2134 1012 6 1302 4209 50 2 0 chr13 93978847 93979349 -26304963 - RLTR1C LTR ERV1 0 503 1 6 1302 8613 93 2 5 chr13 93979349 93980120 -26304192 - L1VL4 LINE L1 -2548 1011 244 6 1302 231 256 209 11 chr13 93980227 93980318 -26303994 - Lx8 LINE L1 -239 7234 7126 6 1302 1236 41 0 0 chr13 93980345 93980491 -26303821 + B1_Mm SINE Alu 2 147 0 6 1302 378 107 0 0 chr13 93980557 93980613 -26303699 + (TCCA)n Simple_repeat Simple_repeat 1 56 0 6 1302 1333 90 5 26 chr13 93980690 93980844 -26303468 + B2_Mm1t SINE B2 1 155 -38 6 1302 3676 66 53 4 chr13 93980844 93981332 -26302980 - RLTR1B LTR ERV1 0 512 1 7 1302 1333 90 5 26 chr13 93981332 93981370 -26302942 + B2_Mm1t SINE B2 156 189 -4 6 1302 436 48 13 8 chr13 93981373 93981455 -26302857 + L1_Mus3 LINE L1 6484 6633 -5 7 1302 330 261 162 15 chr13 93982227 93982363 -26301949 - B4 SINE B4 -11 281 126 7 1302 1993 116 50 28 chr13 93982626 93982946 -26301366 + ORR1A2 LTR MaLR 1 327 0 7 1302 311 318 150 17 chr13 93983641 93983814 -26300498 + L1M5 LINE L1 5519 5714 -459 7 1302 189 0 0 0 chr13 93983815 93983836 -26300476 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 7 1302 228 290 56 42 chr13 93983879 93983951 -26300361 + ID4_ SINE ID 2 74 -9 7 1302 288 285 111 63 chr13 93984117 93984387 -26299925 + RLTR15 LTR ERVK 45 327 -32 7 1302 3624 33 28 0 chr13 93984557 93984981 -26299331 + RLTR10C LTR ERVK 1 436 0 7 1302 262 221 14 56 chr13 93984981 93985053 -26299259 - RLTR11B LTR ERVK -42 411 343 7 1302 1947 106 9 65 chr13 93985076 93985400 -26298912 - ORR1A3 LTR MaLR -20 306 1 7 1302 1428 172 7 91 chr13 93985400 93985707 -26298605 - RMER19C LTR ERVK -330 281 1 7 1302 995 122 120 16 chr13 93985710 93985894 -26298418 - ORR1B1 LTR MaLR -191 203 1 7 1302 180 357 80 20 chr13 93986317 93986417 -26297895 - L2a LINE L2 -343 3083 2978 7 1302 1495 250 24 12 chr13 93986763 93987188 -26297124 - Lx7 LINE L1 -289 7407 6978 7 1302 454 161 27 0 chr13 93987201 93987291 -26297021 + RLTR25A LTR ERVK 1 94 -934 7 1302 457 285 159 55 chr13 93987297 93987624 -26296688 + RLTR9A LTR ERVK 8 368 0 7 1302 663 87 0 0 chr13 93988074 93988178 -26296134 + (GA)n Simple_repeat Simple_repeat 1 104 0 7 1302 1666 147 131 19 chr13 93988178 93988545 -26295767 + RMER16-int LTR ERVK 263 670 -4736 7 1302 4165 122 26 18 chr13 93988550 93989270 -26295042 + RMER16-int LTR ERVK 817 1542 -3864 7 1302 6302 92 9 18 chr13 93989273 93990485 -26293827 + L1Md_F2 LINE L1 277 1481 -4402 7 1302 21369 65 1 1 chr13 93990482 93993437 -26290875 + L1Md_F2 LINE L1 1720 4673 -1210 7 1302 1920 26 0 0 chr13 93993430 93993661 -26290651 + L1Md_F2 LINE L1 5356 5586 -297 7 1302 8418 31 1 2 chr13 93993661 93994657 -26289655 + L1Md_F2 LINE L1 5587 6581 -1 7 1302 515 322 5 5 chr13 93994815 93995018 -26289294 + RMER16-int LTR ERVK 1415 1617 -1697 7 1302 881 259 82 80 chr13 93995039 93995525 -26288787 + RMER16-int LTR ERVK 1791 2277 -3890 7 1302 3055 73 166 2 chr13 93995541 93995981 -26288331 - RLTR1B LTR ERV1 0 512 1 7 1302 349 189 30 0 chr13 93996092 93996171 -26288141 + RMER16-int LTR ERVK 1566 1633 -3773 7 1302 5410 113 51 11 chr13 93996195 93997103 -26287209 + RMER16-int LTR ERVK 2348 3291 -2115 7 1302 852 126 143 0 chr13 93997087 93997262 -26287050 + RMER16-int LTR ERVK 3501 3700 -1706 7 1302 569 278 0 0 chr13 93997352 93997514 -26286798 + MMERGLN-int LTR ERV1 7052 7213 -343 7 1302 288 0 0 0 chr13 93997519 93997551 -26286761 + (TTA)n Simple_repeat Simple_repeat 3 34 0 7 1302 6975 82 22 12 chr13 93997551 93998789 -26285523 - L1_Mus3 LINE L1 -17 6621 5371 7 1302 312 326 16 16 chr13 93998789 93998973 -26285339 + MMERGLN-int LTR ERV1 7471 7654 -124 7 1302 1099 83 21 0 chr13 93999140 93999284 -26285028 + B1_Mus1 SINE Alu 1 147 -1 7 1302 212 77 26 0 chr13 93999293 93999332 -26284980 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 7 1302 218 75 50 0 chr13 93999335 93999375 -26284937 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 7 1302 462 252 15 0 chr13 93999395 93999526 -26284786 - L1_Mur3 LINE L1 -1174 4706 4574 7 1302 657 96 0 0 chr13 93999757 93999851 -26284461 + (TC)n Simple_repeat Simple_repeat 1 94 0 7 1302 414 189 228 26 chr13 93999886 94000000 -26284312 + Lx8 LINE L1 7054 7190 -283 7 1302 279 0 0 0 chr13 94000177 94000208 -26284104 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1302 472 297 87 33 chr13 94000216 94000366 -26283946 + RSINE1 SINE B4 2 159 -6 2 1302 186 382 26 0 chr13 94000423 94000499 -26283813 + MIRb SINE MIR 37 114 -154 3 1302 536 312 188 11 chr13 94000551 94000823 -26283489 + MLT1C LTR MaLR 20 339 -128 4 1302 243 346 87 41 chr13 94001504 94001700 -26282612 + RLTR16 LTR ERVK 30 234 -271 5 1302 315 0 0 0 chr13 94002377 94002412 -26281900 + (GA)n Simple_repeat Simple_repeat 1 35 0 6 1302 511 278 6 100 chr13 94002730 94002890 -26281422 + RSINE1 SINE B4 3 147 -18 7 1302 277 283 76 0 chr13 94003060 94003152 -26281160 - L1MC LINE L1 -2134 5748 5650 8 1302 3620 23 5 12 chr13 94003205 94003608 -26280704 + MTB LTR MaLR 1 400 0 9 1302 210 362 28 28 chr13 94003623 94003731 -26280581 + MIRc SINE MIR 42 149 -119 1 1302 207 0 0 0 chr13 94005413 94005436 -26278876 + (GA)n Simple_repeat Simple_repeat 1 23 0 1 1302 419 288 132 0 chr13 94005438 94005643 -26278669 - L1MA6 LINE L1 -49 6251 6020 1 1302 1145 242 56 68 chr13 94005919 94006256 -26278056 - MT2B LTR ERVL -1 600 268 1 1302 1216 63 0 0 chr13 94006997 94007139 -26277173 + B1_Mus2 SINE Alu 4 145 -2 1 1302 249 33 0 0 chr13 94007229 94007259 -26277053 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1302 1175 82 0 0 chr13 94007259 94007405 -26276907 - B1_Mus2 SINE Alu 0 147 2 1 1302 288 297 79 14 chr13 94008153 94008293 -26276019 + RMER5 LTR ERV1 47 195 -339 1 1302 1150 49 78 24 chr13 94008466 94008633 -26275679 + B2_Mm2 SINE B2 14 189 -6 1 1302 224 254 68 0 chr13 94009024 94009083 -26275229 - MIRb SINE MIR -16 252 190 1 1302 590 250 67 7 chr13 94009137 94009286 -26275026 + MTEb LTR MaLR 11 168 -211 2 1302 272 352 24 24 chr13 94009339 94009464 -26274848 + MTEb LTR MaLR 253 377 -2 2 1302 195 146 0 0 chr13 94009870 94009911 -26274401 + (C)n Simple_repeat Simple_repeat 1 41 0 2 1302 576 0 0 0 chr13 94009923 94009987 -26274325 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1302 1474 62 17 6 chr13 94010484 94010662 -26273650 + B2_Mm2 SINE B2 1 180 -15 2 1302 540 0 0 0 chr13 94010662 94010722 -26273590 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 1302 261 58 0 55 chr13 94011072 94011127 -26273185 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 2 1302 210 154 18 71 chr13 94011339 94011395 -26272917 + GA-rich Low_complexity Low_complexity 1 53 0 2 1302 460 283 68 21 chr13 94012271 94012462 -26271850 - L1ME3B LINE L1 -409 5831 5632 2 1302 426 200 118 24 chr13 94012459 94012628 -26271684 + L1MA8 LINE L1 6003 6187 -104 2 1302 261 0 0 0 chr13 94013066 94013095 -26271217 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1302 213 306 100 46 chr13 94013137 94013267 -26271045 + MIR3 SINE MIR 53 189 -19 3 1302 539 252 90 10 chr13 94013760 94014046 -26270266 - L1MA8 LINE L1 -26 6274 5961 3 1302 745 78 44 32 chr13 94014060 94014407 -26269905 + (TG)n Simple_repeat Simple_repeat 1 351 0 3 1302 261 0 0 0 chr13 94014478 94014507 -26269805 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1302 756 276 51 32 chr13 94014507 94014724 -26269588 - B4 SINE B4 -69 223 3 3 1302 615 286 103 25 chr13 94014729 94015048 -26269264 - L1MA8 LINE L1 -345 5946 5603 3 1302 459 0 0 0 chr13 94015051 94015102 -26269210 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1302 893 233 70 0 chr13 94015107 94015279 -26269033 - B3 SINE B2 -32 184 1 3 1302 827 300 72 26 chr13 94015290 94015960 -26268352 - L1MA8 LINE L1 -681 5610 4897 3 1302 263 71 24 0 chr13 94015973 94016015 -26268297 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 3 1302 424 275 200 31 chr13 94016914 94017109 -26267203 - Tigger5 DNA MER2_type -2163 243 16 3 1302 24 53 0 0 chr13 94017348 94017386 -26266926 + AT_rich Low_complexity Low_complexity 1 38 0 3 1302 364 273 62 26 chr13 94018202 94018315 -26265997 + PB1D10 SINE Alu 1 117 0 4 1302 305 100 0 20 chr13 94018482 94018533 -26265779 + (CCCCCT)n Simple_repeat Simple_repeat 6 55 0 4 1302 633 14 0 0 chr13 94018539 94018613 -26265699 + (TG)n Simple_repeat Simple_repeat 2 75 0 4 1302 180 77 0 0 chr13 94019126 94019152 -26265160 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 4 1302 699 290 142 23 chr13 94019385 94019646 -26264666 - B4 SINE B4 0 292 1 4 1302 333 233 0 14 chr13 94019956 94020030 -26264282 - HAL1-3A_ME LINE L1 -810 2048 1976 4 1302 547 191 13 0 chr13 94020035 94020273 -26264039 + (TG)n Simple_repeat Simple_repeat 1 241 0 4 1302 290 196 18 0 chr13 94020593 94020649 -26263663 - ID4_ SINE ID -21 62 6 4 1302 358 286 10 58 chr13 94020737 94020841 -26263471 + PB1D10 SINE Alu 17 115 -2 4 1302 287 303 13 0 chr13 94021515 94021591 -26262721 - B4A SINE B4 0 292 216 4 1302 188 35 35 0 chr13 94021598 94021627 -26262685 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1302 1252 54 0 0 chr13 94021633 94021780 -26262532 - B1_Mm SINE Alu 0 147 1 5 1302 412 283 17 50 chr13 94021780 94021899 -26262413 - B4A SINE B4 -63 229 115 4 1302 532 119 59 6 chr13 94023399 94023568 -26260744 + (CA)n Simple_repeat Simple_repeat 1 178 0 5 1302 225 127 76 0 chr13 94023608 94023687 -26260625 + (CA)n Simple_repeat Simple_repeat 2 86 0 5 1302 396 104 78 24 chr13 94023732 94023899 -26260413 + (CA)n Simple_repeat Simple_repeat 2 177 0 5 1302 330 327 9 0 chr13 94023899 94024009 -26260303 + MER58A DNA MER1_type 75 185 -39 5 1302 508 304 139 16 chr13 94024140 94024334 -26259978 + B4A SINE B4 10 227 -65 5 1302 1154 183 15 5 chr13 94024339 94024542 -26259770 + B3 SINE B2 5 209 -7 5 1302 282 56 0 0 chr13 94024558 94024594 -26259718 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1302 257 148 0 32 chr13 94025228 94025291 -26259021 + (TATG)n Simple_repeat Simple_repeat 2 62 0 5 1302 523 213 11 0 chr13 94025292 94025386 -26258926 - B1_Mus1 SINE Alu -52 96 2 5 1302 554 63 0 12 chr13 94025922 94026002 -26258310 + (TCCC)n Simple_repeat Simple_repeat 4 82 0 5 1302 841 268 169 62 chr13 94026511 94027307 -26257005 + L1M2 LINE L1 4511 5374 -473 6 1302 293 223 30 14 chr13 94027312 94027384 -26256928 + ID_B1 SINE B4 84 151 -73 6 1302 253 295 115 0 chr13 94027420 94027498 -26256814 - B1F2 SINE Alu -62 87 1 6 1302 863 192 181 0 chr13 94027522 94027704 -26256608 - B3 SINE B2 0 216 2 6 1302 209 214 0 0 chr13 94027712 94027754 -26256558 + T-rich Low_complexity Low_complexity 2 43 0 6 1302 207 0 0 0 chr13 94027807 94027830 -26256482 + (TC)n Simple_repeat Simple_repeat 2 24 0 6 1302 228 67 0 0 chr13 94027830 94027860 -26256452 + (TA)n Simple_repeat Simple_repeat 2 31 0 6 1302 251 213 160 0 chr13 94027860 94027935 -26256377 - MER4B-int LTR ERV1 -5562 1196 1110 6 1302 779 211 6 38 chr13 94028567 94028725 -26255587 + RSINE1 SINE B4 13 165 0 6 1302 252 77 0 0 chr13 94028918 94028957 -26255355 + (TTTG)n Simple_repeat Simple_repeat 1 39 0 6 1302 806 186 20 40 chr13 94028958 94029109 -26255203 - B1_Mur3 SINE Alu 0 149 2 7 1302 218 32 32 0 chr13 94029417 94029448 -26254864 + (TTA)n Simple_repeat Simple_repeat 2 33 0 7 1302 1178 103 0 0 chr13 94029463 94029609 -26254703 - B1_Mus1 SINE Alu -1 147 2 7 1302 536 316 12 31 chr13 94029681 94029844 -26254468 + RSINE1 SINE B4 2 161 -4 7 1302 247 287 81 0 chr13 94030107 94030194 -26254118 - MIRc SINE MIR -22 246 153 7 1302 1501 76 5 0 chr13 94031223 94031407 -26252905 - B2_Mm1t SINE B2 -8 185 1 7 1302 301 333 94 0 chr13 94032807 94032903 -26251409 + B1F2 SINE Alu 5 109 -40 7 1302 48 60 0 0 chr13 94033620 94033703 -26250609 + AT_rich Low_complexity Low_complexity 1 83 0 7 1302 585 291 120 17 chr13 94034182 94034616 -26249696 + L1ME1 LINE L1 5540 6009 -175 7 1302 200 355 0 0 chr13 94034693 94034755 -26249557 + MIRb SINE MIR 193 254 -14 7 1302 981 148 0 0 chr13 94034914 94035049 -26249263 + B1_Mus2 SINE Alu 5 139 -8 8 1302 276 30 0 0 chr13 94035049 94035082 -26249230 + (GA)n Simple_repeat Simple_repeat 1 33 0 8 1302 434 286 81 10 chr13 94035756 94035855 -26248457 + ID_B1 SINE B4 107 212 -12 8 1302 216 0 0 0 chr13 94035855 94035879 -26248433 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 8 1302 2254 88 25 102 chr13 94035996 94036291 -26248021 + ORR1A3 LTR MaLR 1 284 -42 8 1302 1719 36 5 0 chr13 94036291 94036483 -26247829 + B2_Mm1a SINE B2 1 193 0 8 1302 2254 88 25 102 chr13 94036483 94036540 -26247772 + ORR1A3 LTR MaLR 285 326 0 8 1302 1136 223 108 3 chr13 94036719 94037007 -26247305 + MTE2b LTR MaLR 58 375 -4 8 1302 543 270 23 31 chr13 94037417 94037547 -26246765 - B1F SINE Alu 0 149 21 8 1302 222 191 31 16 chr13 94038155 94038219 -26246093 + (CAAA)n Simple_repeat Simple_repeat 2 66 0 8 1302 206 289 33 22 chr13 94038238 94038330 -26245982 - MIRb SINE MIR -77 191 99 8 1302 21 36 0 0 chr13 94038901 94038929 -26245383 + AT_rich Low_complexity Low_complexity 1 28 0 9 1302 552 260 26 13 chr13 94039306 94039462 -26244850 - MIR SINE MIR -9 253 96 9 1302 850 160 45 11 chr13 94039535 94039699 -26244613 + ORR1C2 LTR MaLR 36 194 -190 9 1302 1515 25 0 0 chr13 94039701 94039905 -26244407 + (TTC)n Simple_repeat Simple_repeat 1 204 0 9 1302 612 91 0 0 chr13 94039905 94039993 -26244319 + (TC)n Simple_repeat Simple_repeat 1 88 0 9 1302 822 185 124 5 chr13 94039995 94040180 -26244132 + ORR1C2 LTR MaLR 174 380 -4 9 1302 200 342 87 8 chr13 94040308 94040425 -26243887 - MIRb SINE MIR -138 124 4 8 1302 336 341 66 76 chr13 94040754 94040951 -26243361 - MER21B LTR ERV1 -171 692 498 9 1302 242 340 10 21 chr13 94040880 94040976 -26243336 - MER77 LTR ERVL -4 603 509 9 1302 10583 147 28 30 chr13 94040990 94043822 -26240490 - Lx5 LINE L1 0 7050 4241 9 1302 33291 89 5 3 chr13 94043821 94049150 -26235162 - L1_Mus2 LINE L1 -161 6408 996 9 1302 40019 26 5 6 chr13 94049157 94055090 -26229222 - L1Md_T LINE L1 0 6582 666 9 1302 2048 189 66 98 chr13 94055087 94055885 -26228427 - L1_Mus2 LINE L1 -5509 1128 436 9 1302 447 261 75 8 chr13 94055937 94056083 -26228229 - L1_Mur3 LINE L1 -6610 1102 882 1 1302 1770 251 51 30 chr13 94056737 94057169 -26227143 - MTE-int LTR MaLR -1139 441 1 1 1302 5624 60 6 0 chr13 94057190 94057895 -26226417 - L1_Mus2 LINE L1 0 6566 5858 1 1302 918 282 94 33 chr13 94057917 94058247 -26226065 - ORR1E LTR MaLR -7 352 3 1 1302 763 271 99 24 chr13 94058374 94058627 -26225685 + LTR75 LTR ERVL 276 547 -15 1 1302 566 250 121 0 chr13 94058722 94058846 -26225466 + B1F1 SINE Alu 6 144 -5 1 1302 210 37 0 0 chr13 94058847 94058874 -26225438 + (CAAT)n Simple_repeat Simple_repeat 4 30 0 1 1302 854 120 13 47 chr13 94059102 94059251 -26225061 + B1_Mus1 SINE Alu 5 148 0 1 1302 297 51 0 0 chr13 94059841 94059880 -26224432 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1302 770 215 7 0 chr13 94059952 94060096 -26224216 - B1_Mur1 SINE Alu -4 145 1 1 1302 229 122 227 68 chr13 94060106 94060119 -26224193 - Lx LINE L1 -1 6653 6646 1 1302 198 0 0 0 chr13 94060119 94060141 -26224171 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1 1302 6713 72 4 7 chr13 94060141 94061092 -26223220 - L1_Mus1 LINE L1 -3 6564 5656 1 1302 4736 28 0 7 chr13 94061094 94061716 -26222596 - L1Md_F3 LINE L1 0 6584 5985 1 1302 7984 101 0 2 chr13 94061713 94062886 -26221426 - L1_Mus1 LINE L1 -227 5656 4486 1 1302 1224 89 6 6 chr13 94062886 94063055 -26221257 - B2_Mm2 SINE B2 -26 169 1 1 1302 519 370 16 6 chr13 94063055 94063234 -26221078 - B4A SINE B4 -62 230 50 1 1302 21 0 0 0 chr13 94063305 94063326 -26220986 + AT_rich Low_complexity Low_complexity 1 21 0 1 1302 332 266 199 32 chr13 94065286 94065507 -26218805 + LTR33 LTR ERVL 238 495 -20 1 1302 565 284 150 87 chr13 94065797 94065874 -26218438 - B4A SINE B4 -8 284 228 1 1302 1002 196 85 0 chr13 94065874 94066063 -26218249 - B3 SINE B2 -11 205 1 1 1302 565 284 150 87 chr13 94066063 94066251 -26218061 - B4A SINE B4 -65 227 2 1 1302 1553 292 81 35 chr13 94066251 94067127 -26217185 - L1M2 LINE L1 -780 5363 4448 1 1302 423 267 178 22 chr13 94067127 94067307 -26217005 + B4A SINE B4 1 208 -84 1 1302 450 53 0 0 chr13 94067491 94067548 -26216764 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 1302 387 374 68 41 chr13 94067792 94068157 -26216155 + MLT1L LTR MaLR 129 503 -107 1 1302 646 312 60 94 chr13 94068451 94068624 -26215688 + MLT2B2 LTR ERVL 1 186 -329 1 1302 270 0 0 0 chr13 94068624 94068654 -26215658 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1 1302 1179 36 0 0 chr13 94068654 94068792 -26215520 - B1_Mus2 SINE Alu -9 138 1 1 1302 646 312 60 94 chr13 94068792 94069147 -26215165 + MLT2B2 LTR ERVL 187 511 -4 1 1302 192 77 0 0 chr13 94069758 94069784 -26214528 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1 1302 406 269 36 43 chr13 94071695 94071835 -26212477 + B4A SINE B4 34 172 -120 1 1302 333 333 81 35 chr13 94071818 94071922 -26212390 + B4A SINE B4 91 196 -96 1 1302 198 0 0 0 chr13 94071922 94071944 -26212368 + (GA)n Simple_repeat Simple_repeat 1 22 0 1 1302 333 333 81 35 chr13 94071944 94072013 -26212299 + B4A SINE B4 197 272 -20 1 1302 243 0 0 0 chr13 94073173 94073200 -26211112 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1302 243 0 0 0 chr13 94074009 94074036 -26210276 + (CCCCG)n Simple_repeat Simple_repeat 3 29 0 1 1302 21 0 0 0 chr13 94074732 94074753 -26209559 + AT_rich Low_complexity Low_complexity 1 21 0 1 1302 24 0 0 0 chr13 94075452 94075476 -26208836 + AT_rich Low_complexity Low_complexity 1 24 0 1 1302 335 314 42 0 chr13 94076309 94076427 -26207885 + MIR SINE MIR 34 156 -106 1 1302 526 202 287 0 chr13 94076965 94077118 -26207194 + B3 SINE B2 15 211 -5 1 1302 22 0 0 0 chr13 94077129 94077151 -26207161 + AT_rich Low_complexity Low_complexity 1 22 0 1 1302 255 194 96 14 chr13 94077192 94077265 -26207047 + MLT1A1 LTR MaLR 1 79 -329 1 1302 256 122 73 0 chr13 94077275 94077316 -26206996 + B3 SINE B2 2 45 -171 1 1302 281 273 157 11 chr13 94078809 94078898 -26205414 + PB1D10 SINE Alu 3 104 -13 1 1302 408 236 141 40 chr13 94078963 94079162 -26205150 - MER112 DNA MER1_type -42 219 1 1 1302 279 267 114 38 chr13 94080012 94080117 -26204195 - PB1D10 SINE Alu 0 117 5 1 1302 697 259 101 43 chr13 94081066 94081324 -26202988 - B4A SINE B4 -18 274 2 1 1302 243 197 32 32 chr13 94081709 94081772 -26202540 + ID2 SINE ID 5 67 -16 1 1302 26 0 0 0 chr13 94081969 94081995 -26202317 + AT_rich Low_complexity Low_complexity 1 26 0 1 1302 738 185 89 0 chr13 94082543 94082678 -26201634 + B1_Mus2 SINE Alu 1 147 0 1 1302 1086 257 61 17 chr13 94082967 94083065 -26201247 - Lx8 LINE L1 -353 7120 7024 1 1302 895 120 147 119 chr13 94083065 94083283 -26201029 - URR1B DNA MER1_type 0 225 2 1 1302 1086 257 61 17 chr13 94083283 94083528 -26200784 - Lx8 LINE L1 -450 7023 6763 1 1302 977 186 71 15 chr13 94083811 94084008 -26200304 + B3 SINE B2 1 208 -8 1 1302 676 240 58 13 chr13 94085069 94085225 -26199087 - B3 SINE B2 -7 209 47 1 1302 420 280 110 20 chr13 94085567 94085697 -26198615 - MER5A DNA MER1_type -1 188 45 1 1302 273 29 0 0 chr13 94085697 94085731 -26198581 + (CTG)n Simple_repeat Simple_repeat 2 35 0 1 1302 420 280 110 20 chr13 94085731 94085746 -26198566 - MER5A DNA MER1_type -145 44 30 1 1302 409 302 132 66 chr13 94086186 94086413 -26197899 - MLT1E1A LTR MaLR -1 679 438 1 1302 354 229 0 35 chr13 94086451 94086537 -26197775 - MLT1E1A LTR MaLR -398 256 174 1 1302 656 163 197 0 chr13 94086590 94086737 -26197575 - URR1B DNA MER1_type 0 225 50 1 1302 259 290 0 16 chr13 94086765 94086828 -26197484 - MLT1E1A LTR MaLR -606 74 13 1 1302 261 57 0 0 chr13 94086995 94087030 -26197282 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1302 1184 48 0 7 chr13 94087030 94087177 -26197135 - B1_Mus2 SINE Alu 0 147 2 1 1302 448 182 0 0 chr13 94087474 94087551 -26196761 - ID4_ SINE ID -5 78 2 1 1302 363 228 139 0 chr13 94087672 94087751 -26196561 - PB1D10 SINE Alu -13 104 15 1 1302 333 0 0 0 chr13 94087931 94087968 -26196344 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1302 235 139 0 44 chr13 94087968 94088013 -26196299 - B2_Mm1t SINE B2 -13 180 138 1 1302 355 140 8 18 chr13 94088003 94088068 -26196244 - B2_Mm2 SINE B2 -102 114 47 1 1302 1130 99 40 12 chr13 94088115 94088288 -26196024 - B2_Mm1t SINE B2 -14 179 2 1 1302 1071 203 19 14 chr13 94088785 94089000 -26195312 + B3 SINE B2 1 216 0 1 1302 207 286 0 67 chr13 94089153 94089213 -26195099 - MIRm SINE MIR -21 255 200 1 1302 349 341 146 9 chr13 94090530 94090749 -26193563 + B4A SINE B4 1 249 -43 1 1302 474 108 0 0 chr13 94090793 94090876 -26193436 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 1302 240 280 173 0 chr13 94091217 94091292 -26193020 - L2a LINE L2 -37 3389 3302 1 1302 575 257 58 7 chr13 94091557 94091694 -26192618 - B1_Mur1 SINE Alu -4 145 2 1 1302 691 278 31 0 chr13 94092379 94092570 -26191742 - B3A SINE B2 0 198 2 1 1302 629 343 24 43 chr13 94092601 94092811 -26191501 - B4A SINE B4 -14 278 73 1 1302 453 261 0 0 chr13 94092804 94092896 -26191416 - MER2 DNA MER2_type -45 300 209 1 1302 214 229 42 0 chr13 94092936 94092984 -26191328 - ID4 SINE ID -30 53 4 1 1302 258 157 14 28 chr13 94093010 94093082 -26191230 - MER2 DNA MER2_type -163 182 112 1 1302 1221 208 151 6 chr13 94093314 94093633 -26190679 - ORR1D1 LTR MaLR -5 369 5 1 1302 682 147 17 0 chr13 94093637 94093753 -26190559 - ORR1D1-int LTR MaLR 0 1370 1253 1 1302 716 144 112 15 chr13 94093755 94093889 -26190423 + B1_Mus2 SINE Alu 1 147 0 1 1302 356 200 100 0 chr13 94093870 94093970 -26190342 - ORR1D1-int LTR MaLR -89 1281 1172 1 1302 735 256 44 5 chr13 94093968 94094172 -26190140 - ORR1D1-int LTR MaLR -703 667 456 1 1302 191 304 68 10 chr13 94095915 94096018 -26188294 + MIRb SINE MIR 101 209 -59 1 1302 23 0 0 0 chr13 94096338 94096361 -26187951 + AT_rich Low_complexity Low_complexity 1 23 0 1 1302 485 235 167 62 chr13 94096509 94096736 -26187576 - Lx8 LINE L1 -376 7097 6847 1 1302 946 252 41 76 chr13 94096734 94097051 -26187261 + Lx8 LINE L1 6555 6860 -613 1 1302 1006 268 59 38 chr13 94097094 94097435 -26186877 - Lx8 LINE L1 -1030 6443 6096 1 1302 330 218 58 83 chr13 94097591 94097711 -26186601 - PB1D10 SINE Alu 0 117 1 1 1302 2190 47 7 0 chr13 94097757 94098032 -26186280 - L1Md_F2 LINE L1 -1 6581 6305 1 1302 682 269 152 52 chr13 94098094 94098384 -26185928 + MER2 DNA MER2_type 26 344 -1 1 1302 414 106 59 0 chr13 94098673 94098758 -26185554 - L1_Mus3 LINE L1 -7 6631 6542 1 1302 270 0 0 0 chr13 94099457 94099487 -26184825 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1302 453 76 324 54 chr13 94099491 94099602 -26184710 - B2_Mm2 SINE B2 -8 187 47 1 1302 1024 129 29 6 chr13 94099668 94099839 -26184473 - B2_Mm1t SINE B2 -14 179 5 1 1302 1055 97 13 6 chr13 94099853 94100009 -26184303 - B2_Mm2 SINE B2 -4 191 35 1 1302 226 347 51 0 chr13 94100244 94100342 -26183970 - L2a LINE L2 -251 3175 3073 1 1302 1101 30 0 0 chr13 94100362 94100495 -26183817 + (TGG)n Simple_repeat Simple_repeat 2 134 0 1 1302 1673 172 34 53 chr13 94100589 94100969 -26183343 + ORR1D1 LTR MaLR 1 373 -1 1 1302 247 184 122 0 chr13 94101420 94101518 -26182794 - L1M5 LINE L1 -240 5884 5775 1 1302 399 97 176 27 chr13 94101579 94101653 -26182659 - MTD LTR MaLR 0 419 335 1 1302 876 238 20 45 chr13 94101656 94101854 -26182458 - MTD LTR MaLR -209 210 18 1 1302 463 287 98 23 chr13 94101876 94102140 -26182172 - L1M5 LINE L1 -446 5678 5395 1 1302 657 318 83 48 chr13 94102407 94102958 -26181354 - RLTR17 LTR ERVK -35 657 125 1 1302 1374 59 43 5 chr13 94103409 94103596 -26180716 - B2_Mm2 SINE B2 0 195 2 1 1302 873 129 42 21 chr13 94103901 94104043 -26180269 - B1_Mur4 SINE Alu -1 149 5 1 1302 40 21 0 0 chr13 94104134 94104181 -26180131 + AT_rich Low_complexity Low_complexity 1 47 0 1 1302 326 223 157 13 chr13 94104537 94104696 -26179616 - Charlie5 DNA MER1_type -211 2413 2232 1 1302 1145 75 0 0 chr13 94105584 94105731 -26178581 - B1_Mus2 SINE Alu 0 147 1 1 1302 312 27 0 0 chr13 94107448 94107485 -26176827 + (TC)n Simple_repeat Simple_repeat 2 38 0 1 1302 277 309 127 0 chr13 94108490 94108600 -26175712 - MER20 DNA MER1_type -19 200 77 1 1302 768 241 35 15 chr13 94108808 94109006 -26175306 - B3 SINE B2 -13 203 2 1 1302 213 39 0 0 chr13 94109430 94109456 -26174856 + (CTTTG)n Simple_repeat Simple_repeat 2 27 0 2 1302 486 204 0 20 chr13 94109560 94109660 -26174652 + PB1D10 SINE Alu 1 98 -19 2 1303 481 346 31 0 chr13 94110162 94110324 -26173988 + MER82 DNA MER2_type 9 175 -478 2 1303 186 71 0 0 chr13 94110329 94110357 -26173955 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 2 1303 681 240 0 0 chr13 94110382 94110557 -26173755 + T-rich Low_complexity Low_complexity 3 177 0 2 1303 251 279 198 9 chr13 94110564 94110584 -26173728 - B4 SINE B4 -46 246 149 2 1303 292 238 33 77 chr13 94110584 94110675 -26173637 - PB1D9 SINE Alu -5 115 29 2 1303 1087 282 30 70 chr13 94110699 94111096 -26173216 + MER82 DNA MER2_type 192 572 -81 2 1303 1249 249 115 19 chr13 94111112 94111476 -26172836 - MTD LTR MaLR -6 413 15 2 1303 333 241 63 49 chr13 94112549 94112692 -26171620 + B3 SINE B2 50 192 -1 2 1303 307 313 60 15 chr13 94112757 94112890 -26171422 + MIR SINE MIR 2 140 -122 2 1303 214 216 0 19 chr13 94113412 94113464 -26170848 - B1_Mur1 SINE Alu 0 149 99 2 1303 482 198 18 0 chr13 94114065 94114176 -26170136 + (CATATA)n Simple_repeat Simple_repeat 2 114 0 2 1303 867 247 56 0 chr13 94114200 94114378 -26169934 - B3 SINE B2 -28 188 1 2 1303 1679 106 98 7 chr13 94115144 94115430 -26168882 + RLTR47_MM LTR ERV1 134 445 -87 2 1303 838 250 70 5 chr13 94115497 94115698 -26168614 - B3 SINE B2 -1 215 2 2 1303 550 322 103 5 chr13 94115997 94116181 -26168131 + B4 SINE B4 22 223 -69 2 1303 368 82 16 0 chr13 94116297 94116358 -26167954 + (CA)n Simple_repeat Simple_repeat 2 63 0 2 1303 30 45 0 0 chr13 94116781 94116825 -26167487 + AT_rich Low_complexity Low_complexity 1 44 0 2 1303 228 268 105 45 chr13 94119678 94119811 -26164501 - MER74A LTR ERVL -137 421 281 2 1303 390 325 48 8 chr13 94119996 94120120 -26164192 + RSINE1 SINE B4 13 141 -24 2 1303 224 317 60 12 chr13 94121187 94121270 -26163042 + RSINE1 SINE B4 9 95 -70 2 1303 259 313 0 12 chr13 94121315 94121399 -26162913 + CT-rich Low_complexity Low_complexity 5 87 0 2 1303 1606 210 89 43 chr13 94121897 94122290 -26162022 - MTD LTR MaLR -8 411 1 2 1303 243 362 16 57 chr13 94122293 94122416 -26161896 - MER5A1 DNA MER1_type -22 144 27 2 1303 366 268 82 28 chr13 94122751 94122888 -26161424 + B1F SINE Alu 6 146 -3 2 1303 289 329 0 35 chr13 94122902 94122915 -26161397 + ID4_ SINE ID 2 37 -46 2 1303 293 241 0 0 chr13 94122915 94122973 -26161339 + tRNA-Ala-GCY_ tRNA tRNA 6 63 -12 2 1303 289 329 0 35 chr13 94122973 94122987 -26161325 + ID4_ SINE ID 38 83 0 2 1303 917 119 112 12 chr13 94123008 94123178 -26161134 + URR1B DNA MER1_type 37 223 -2 2 1303 798 326 67 88 chr13 94123320 94123946 -26160366 - RLTR18 LTR ERVK -3 613 1 2 1303 276 313 0 24 chr13 94123998 94124083 -26160229 - MTEb LTR MaLR -57 322 240 2 1303 305 328 109 0 chr13 94124299 94124427 -26159885 - Tigger13a DNA MER2_type -481 290 149 2 1303 692 269 20 45 chr13 94124495 94124697 -26159615 + B3A SINE B2 2 198 0 2 1303 39 38 0 0 chr13 94124762 94124815 -26159497 + AT_rich Low_complexity Low_complexity 1 53 0 2 1303 752 10 0 38 chr13 94125404 94125594 -26158718 - L1Md_T LINE L1 0 6582 6482 2 1303 24 0 0 0 chr13 94125752 94125776 -26158536 + AT_rich Low_complexity Low_complexity 1 24 0 2 1303 437 170 18 18 chr13 94128078 94128192 -26156120 + (TA)n Simple_repeat Simple_repeat 1 114 0 2 1303 358 43 0 21 chr13 94128192 94128240 -26156072 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1303 23 0 0 0 chr13 94128843 94128866 -26155446 + AT_rich Low_complexity Low_complexity 1 23 0 2 1303 1057 197 65 5 chr13 94129095 94129294 -26155018 - B3 SINE B2 0 216 6 2 1303 26 0 0 0 chr13 94130594 94130620 -26153692 + AT_rich Low_complexity Low_complexity 1 26 0 2 1303 240 244 163 22 chr13 94130735 94130827 -26153485 + PB1D9 SINE Alu 9 113 -7 2 1303 485 276 50 50 chr13 94132830 94133051 -26151261 - L1MB8 LINE L1 -54 6124 5904 2 1303 391 284 8 8 chr13 94133054 94133171 -26151141 - L1MB8 LINE L1 -552 5626 5510 2 1303 698 267 131 35 chr13 94133276 94133782 -26150530 - L1MB8 LINE L1 -706 5468 4919 2 1303 1184 102 28 0 chr13 94133787 94133963 -26150349 - B2_Mm2 SINE B2 -8 187 7 2 1303 480 294 96 45 chr13 94133968 94134260 -26150052 - L1MB8 LINE L1 -1244 4902 4596 2 1303 611 280 117 17 chr13 94134280 94134578 -26149734 - L1MB8 LINE L1 -1873 4273 3946 2 1303 594 0 0 0 chr13 94135614 94135680 -26148632 + (CTTTG)n Simple_repeat Simple_repeat 3 68 0 2 1303 437 257 36 9 chr13 94135680 94135790 -26148522 - PB1D10 SINE Alu -4 113 1 2 1303 197 69 0 0 chr13 94136801 94136830 -26147482 + MIRc SINE MIR 164 192 -76 2 1303 27 0 0 0 chr13 94137228 94137255 -26147057 + AT_rich Low_complexity Low_complexity 1 27 0 2 1303 1234 152 4 78 chr13 94137339 94137582 -26146730 + URR1B DNA MER1_type 1 225 0 2 1303 261 346 13 0 chr13 94137935 94138013 -26146299 - ID2 SINE ID -2 81 3 2 1303 188 261 102 63 chr13 94138932 94139059 -26145253 + MIR3 SINE MIR 39 170 -38 2 1303 22 0 0 0 chr13 94140169 94140191 -26144121 + AT_rich Low_complexity Low_complexity 1 22 0 2 1303 382 284 160 24 chr13 94140283 94140489 -26143823 - Lx8 LINE L1 0 7473 7240 2 1303 1366 267 141 45 chr13 94140797 94141414 -26142898 - Lx8 LINE L1 -33 7440 6765 2 1303 421 289 103 97 chr13 94142987 94143336 -26140976 - ORR1E LTR MaLR -7 352 2 2 1303 1074 207 152 13 chr13 94143337 94143640 -26140672 - MTE-int LTR MaLR -73 1507 1163 2 1303 762 196 79 32 chr13 94144497 94144687 -26139625 + B3 SINE B2 3 201 -15 2 1303 592 259 38 0 chr13 94145103 94145234 -26139078 + B1_Mur1 SINE Alu 7 142 -7 2 1303 237 295 117 28 chr13 94147476 94147619 -26136693 - MIRc SINE MIR -69 199 50 2 1303 517 292 155 8 chr13 94147956 94148208 -26136104 - B4A SINE B4 -3 289 1 2 1303 268 322 31 82 chr13 94148321 94148419 -26135893 - B1_Mur4 SINE Alu 0 120 28 2 1303 236 250 18 0 chr13 94148415 94148471 -26135841 + PB1D10 SINE Alu 44 100 -17 2 1303 833 161 21 0 chr13 94148773 94148916 -26135396 + B1_Mus2 SINE Alu 2 147 0 2 1303 1051 97 77 18 chr13 94149908 94150076 -26134236 + B2_Mm1t SINE B2 2 179 -14 2 1303 364 122 9 0 chr13 94150127 94150191 -26134121 + B2_Mm2 SINE B2 47 114 -102 2 1303 441 0 0 0 chr13 94150206 94150255 -26134057 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2 1303 21 36 0 0 chr13 94150256 94150284 -26134028 + AT_rich Low_complexity Low_complexity 1 28 0 2 1303 638 212 155 16 chr13 94150803 94150990 -26133322 + B3 SINE B2 1 213 -3 2 1303 721 266 126 31 chr13 94151780 94152137 -26132175 - L1MB2 LINE L1 -119 6052 5662 2 1303 305 291 102 0 chr13 94152265 94152392 -26131920 - L1MCa LINE L1 -5437 1691 1552 2 1303 692 269 123 24 chr13 94152487 94152738 -26131574 - MER2 DNA MER2_type 0 345 70 2 1303 226 279 0 14 chr13 94152875 94152944 -26131368 - L1MCa LINE L1 -5314 1109 1042 2 1303 577 202 153 0 chr13 94153421 94153545 -26130767 - B1_Mur4 SINE Alu -7 143 1 2 1303 2135 145 69 32 chr13 94153740 94153844 -26130468 + MTC LTR MaLR 1 105 -316 2 1303 5914 109 24 34 chr13 94153844 94154794 -26129518 - Lx4A LINE L1 0 7058 6118 2 1303 2135 145 69 32 chr13 94154794 94155095 -26129217 + MTC LTR MaLR 106 421 0 2 1303 549 264 53 23 chr13 94155160 94155331 -26128981 - MLT1B LTR MaLR -214 176 1 2 1303 287 279 178 33 chr13 94155406 94155558 -26128754 + MER3 DNA MER1_type 34 207 -2 2 1303 313 314 141 51 chr13 94156099 94156288 -26128024 - L1MD3 LINE L1 -22 7973 7782 2 1303 407 229 0 0 chr13 94156288 94156371 -26127941 - ID4 SINE ID 0 83 1 2 1303 313 314 141 51 chr13 94156371 94156634 -26127678 - L1MD3 LINE L1 -214 7781 7480 2 1303 36 0 0 0 chr13 94156964 94157000 -26127312 + AT_rich Low_complexity Low_complexity 1 36 0 2 1303 629 132 0 0 chr13 94157031 94157122 -26127190 - B1_Mus2 SINE Alu 0 147 57 2 1303 337 339 97 11 chr13 94157803 94157979 -26126333 + MIRb SINE MIR 9 199 -69 2 1303 574 174 27 9 chr13 94158025 94158135 -26126177 + PB1D9 SINE Alu 2 113 -7 2 1303 290 329 0 0 chr13 94158189 94158265 -26126047 + PB1 SINE Alu 25 100 -27 2 1303 30 59 0 0 chr13 94158402 94158453 -26125859 + AT_rich Low_complexity Low_complexity 1 51 0 2 1303 223 324 26 37 chr13 94159755 94159911 -26124401 - B4A SINE B4 -11 154 2 2 1303 441 0 0 0 chr13 94159919 94159968 -26124344 + (TTA)n Simple_repeat Simple_repeat 2 50 0 2 1303 391 252 0 0 chr13 94160261 94160356 -26123956 + BC1_Mm scRNA scRNA 2 96 -56 2 1303 1096 72 0 0 chr13 94160789 94160928 -26123384 + B1_Mus2 SINE Alu 2 140 -7 2 1303 22 35 0 0 chr13 94160933 94160962 -26123350 + AT_rich Low_complexity Low_complexity 1 29 0 2 1303 862 188 0 0 chr13 94161208 94161357 -26122955 - B1_Mur4 SINE Alu -1 149 1 2 1303 1435 69 11 0 chr13 94161863 94162052 -26122260 - B2_Mm1t SINE B2 -1 192 2 2 1303 435 216 65 103 chr13 94162365 94162520 -26121792 + B1F SINE Alu 1 149 0 2 1303 1302 56 0 0 chr13 94162593 94162862 -26121450 + (TG)n Simple_repeat Simple_repeat 1 269 0 2 1303 1070 245 83 62 chr13 94163553 94164036 -26120276 - RLTR12B LTR ERVK -25 503 11 2 1303 278 375 95 7 chr13 94164392 94164529 -26119783 - RSINE1 SINE B4 -12 153 5 2 1303 544 186 53 68 chr13 94164604 94164737 -26119575 + B1_Mur4 SINE Alu 3 133 -17 2 1303 1121 57 0 0 chr13 94164965 94165105 -26119207 + B1_Mm SINE Alu 2 141 -6 2 1303 235 311 0 0 chr13 94165212 94165273 -26119039 + CT-rich Low_complexity Low_complexity 1 61 0 2 1303 302 271 156 0 chr13 94165286 94165408 -26118904 - L1MC4a LINE L1 -108 7934 7794 2 1303 384 271 61 63 chr13 94165419 94165725 -26118587 - L1MC4a LINE L1 -1059 6983 6803 2 1303 537 338 42 60 chr13 94165760 94165851 -26118461 - B4A SINE B4 0 292 212 2 1303 7406 73 22 12 chr13 94165851 94166864 -26117448 - RLTR13D5 LTR ERVK 0 1023 1 2 1303 537 338 42 60 chr13 94166864 94167055 -26117257 - B4A SINE B4 -81 211 15 2 1303 768 171 148 44 chr13 94167275 94167458 -26116854 - B3 SINE B2 -12 204 3 3 1303 337 288 32 48 chr13 94167460 94167646 -26116666 - L1MC4 LINE L1 -4682 1533 1351 3 1303 493 229 156 0 chr13 94167657 94167779 -26116533 + B1_Mur1 SINE Alu 2 142 -7 3 1303 410 305 267 29 chr13 94168203 94168236 -26116076 - L1MC4 LINE L1 -5215 1000 967 3 1303 978 194 44 19 chr13 94168236 94168441 -26115871 - B3 SINE B2 -4 212 3 3 1303 410 305 267 29 chr13 94168441 94168853 -26115459 - L1MC4 LINE L1 -5249 966 449 3 1303 21 57 0 0 chr13 94170236 94170271 -26114041 + AT_rich Low_complexity Low_complexity 1 35 0 3 1303 1147 43 64 0 chr13 94170518 94170658 -26113654 - B1_Mur4 SINE Alu 0 150 2 3 1303 717 213 71 0 chr13 94170814 94170941 -26113371 - B1_Mur2 SINE Alu -11 138 3 3 1303 1306 158 10 5 chr13 94171083 94171287 -26113025 - B3 SINE B2 -3 213 9 3 1303 209 0 0 88 chr13 94174076 94174110 -26110202 + (A)n Simple_repeat Simple_repeat 1 31 0 3 1303 24 53 0 0 chr13 94174137 94174175 -26110137 + AT_rich Low_complexity Low_complexity 1 38 0 3 1303 409 198 12 47 chr13 94175632 94175717 -26108595 - ID4 SINE ID 0 83 2 3 1303 21 0 0 0 chr13 94175830 94175851 -26108461 + AT_rich Low_complexity Low_complexity 1 21 0 3 1303 302 302 208 8 chr13 94175898 94176018 -26108294 + ID_B1 SINE B4 81 224 0 3 1303 461 235 0 39 chr13 94175918 94176020 -26108292 + PB1D10 SINE Alu 20 117 0 3 1303 709 204 96 0 chr13 94176139 94176296 -26108016 - B3 SINE B2 -34 182 11 3 1303 586 324 75 25 chr13 94176475 94176836 -26107476 - Lx7 LINE L1 -401 7295 6917 3 1303 700 245 48 29 chr13 94176855 94177065 -26107247 + Lx7 LINE L1 6695 6908 -788 3 1303 338 305 42 0 chr13 94177372 94177467 -26106845 + PB1 SINE Alu 18 116 -11 3 1303 665 220 7 28 chr13 94177649 94177794 -26106518 - B1_Mur1 SINE Alu -6 143 2 3 1303 553 294 149 0 chr13 94178489 94178683 -26105629 - ID_B1 SINE B4 -1 223 1 3 1303 1269 128 27 0 chr13 94178864 94179051 -26105261 + B2_Mm2 SINE B2 3 194 -1 3 1303 185 35 69 0 chr13 94179053 94179082 -26105230 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 3 1303 367 280 120 0 chr13 94179143 94179243 -26105069 + PB1 SINE Alu 16 127 0 3 1303 491 299 0 0 chr13 94179248 94179355 -26104957 + PB1D9 SINE Alu 1 107 -13 3 1303 639 0 0 0 chr13 94179355 94179426 -26104886 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 3 1303 1238 41 14 7 chr13 94179435 94179580 -26104732 + B1_Mus2 SINE Alu 1 147 0 3 1303 942 209 50 25 chr13 94179619 94179820 -26104492 + B3 SINE B2 5 210 -6 3 1303 261 184 171 11 chr13 94180150 94180238 -26104074 - L1MB4 LINE L1 -15 6165 6064 3 1303 1170 216 68 34 chr13 94180274 94180629 -26103683 - L1MB4 LINE L1 -228 5952 5586 3 1303 542 239 106 21 chr13 94180767 94180908 -26103404 - RSINE1 SINE B4 -9 156 4 3 1303 254 357 126 0 chr13 94181079 94181278 -26103034 - L2c LINE L2 -223 3164 2941 3 1303 189 74 0 0 chr13 94182359 94182386 -26101926 + (G)n Simple_repeat Simple_repeat 1 27 0 3 1303 224 260 282 13 chr13 94183482 94183560 -26100752 - RSINE1 SINE B4 -61 104 6 3 1303 223 367 7 59 chr13 94184160 94184296 -26100016 - B4 SINE B4 -150 142 14 3 1303 249 33 0 0 chr13 94185193 94185223 -26099089 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1303 240 225 108 40 chr13 94186037 94186111 -26098201 - RSINE1 SINE B4 -31 134 56 3 1303 639 211 47 8 chr13 94186994 94187123 -26097189 + B1_Mur2 SINE Alu 1 134 -15 3 1303 1684 186 84 21 chr13 94187405 94187785 -26096527 - MTC LTR MaLR -17 404 1 3 1303 429 252 93 0 chr13 94192076 94192183 -26092129 - PB1D10 SINE Alu 0 117 1 3 1303 589 153 31 0 chr13 94192604 94192702 -26091610 - B1_Mur1 SINE Alu 0 149 49 3 1303 3243 37 42 8 chr13 94194739 94195122 -26089190 + MTA_Mm LTR MaLR 1 396 0 3 1303 304 271 178 15 chr13 94195308 94195443 -26088869 - MLT1C LTR MaLR -4 463 307 3 1303 211 373 0 0 chr13 94195543 94195610 -26088702 + ID_B1 SINE B4 74 140 -84 3 1303 3793 95 128 19 chr13 94195720 94196294 -26088018 + L1VL4 LINE L1 761 1400 -4480 3 1303 6017 78 34 1 chr13 94196294 94197056 -26087256 + L1_Mus3 LINE L1 5850 6636 -2 3 1303 6515 106 38 20 chr13 94197056 94198163 -26086149 + L1VL4 LINE L1 1346 2429 -3451 3 1303 1615 128 55 0 chr13 94198163 94198436 -26085876 + Lx2 LINE L1 5793 6080 -917 3 1303 577 261 66 7 chr13 94199718 94199953 -26084359 + MTEb LTR MaLR 40 343 -36 3 1303 879 160 8 0 chr13 94202213 94202344 -26081968 + B1_Mus2 SINE Alu 4 135 -12 3 1303 22 0 0 0 chr13 94202982 94203004 -26081308 + AT_rich Low_complexity Low_complexity 1 22 0 3 1303 446 229 0 0 chr13 94203355 94203438 -26080874 + B3A SINE B2 1 83 -115 3 1303 330 280 168 8 chr13 94203523 94203642 -26080670 + B1_Mur1 SINE Alu 4 141 -8 3 1303 1049 201 50 0 chr13 94205545 94205744 -26078568 - B3 SINE B2 -7 209 1 3 1303 2284 65 10 14 chr13 94205807 94206101 -26078211 - L1Md_T LINE L1 0 6582 6290 3 1303 1333 83 33 11 chr13 94206628 94206811 -26077501 + B2_Mm2 SINE B2 2 188 -7 3 1303 604 199 55 8 chr13 94207923 94208050 -26076262 - B1_Mus2 SINE Alu -12 135 3 3 1303 502 306 20 13 chr13 94208799 94208948 -26075364 + B3A SINE B2 2 151 -47 3 1303 288 0 0 0 chr13 94208968 94209000 -26075312 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1303 388 329 60 95 chr13 94209893 94210178 -26074134 + B4A SINE B4 8 282 -10 3 1303 370 259 29 0 chr13 94210242 94210488 -26073824 + (CA)n Simple_repeat Simple_repeat 1 253 0 3 1303 306 50 0 0 chr13 94211164 94211204 -26073108 + (TGGGGG)n Simple_repeat Simple_repeat 3 42 0 3 1303 1282 48 0 0 chr13 94211656 94211801 -26072511 - B1_Mus2 SINE Alu 0 147 3 3 1303 379 195 32 14 chr13 94212037 94212135 -26072177 + B1_Mur1 SINE Alu 24 149 0 3 1303 587 139 59 10 chr13 94212965 94213067 -26071245 - B1_Mus2 SINE Alu 0 147 41 3 1303 263 183 0 62 chr13 94213017 94213081 -26071231 - 4.5SRNA scRNA scRNA -8 86 27 3 1303 3354 46 10 8 chr13 94213332 94213726 -26070586 + MTA_Mm LTR MaLR 1 395 -1 3 1303 690 167 35 48 chr13 94214034 94214179 -26070133 + B1_Mur2 SINE Alu 5 147 -2 3 1303 260 279 131 8 chr13 94214263 94214393 -26069919 + B4 SINE B4 126 271 -21 3 1303 186 43 0 0 chr13 94215284 94215307 -26069005 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1303 678 67 0 0 chr13 94215320 94215410 -26068902 - B1_Mus1 SINE Alu -12 136 47 3 1303 268 236 27 27 chr13 94216362 94216436 -26067876 - B1F SINE Alu 0 149 76 3 1303 1855 94 81 3 chr13 94217162 94217471 -26066841 + Lx3B LINE L1 5893 6225 -748 3 1303 727 235 194 6 chr13 94217497 94217677 -26066635 - B3 SINE B2 -2 214 1 3 1303 369 246 70 43 chr13 94217677 94217792 -26066520 - RSINE1 SINE B4 -45 120 3 3 1303 918 262 72 25 chr13 94217857 94218210 -26066102 - Lx7 LINE L1 -438 7258 6802 3 1303 279 221 180 50 chr13 94218229 94218329 -26065983 - PB1D10 SINE Alu 0 117 5 3 1303 350 327 0 0 chr13 94218844 94218941 -26065371 - B1F1 SINE Alu -13 107 11 3 1303 1187 66 0 0 chr13 94219104 94219241 -26065071 - B1_Mus2 SINE Alu -9 138 2 3 1303 293 172 174 6 chr13 94220345 94220455 -26063857 + L1MC LINE L1 4020 4166 -1980 3 1303 1367 90 26 16 chr13 94220491 94220683 -26063629 + B2_Mm2 SINE B2 2 195 0 3 1303 615 289 34 5 chr13 94220851 94221060 -26063252 + L1MC2 LINE L1 4826 5040 -1106 3 1303 3743 15 2 0 chr13 94221083 94221478 -26062834 + MTA_Mm LTR MaLR 1 396 0 3 1303 524 260 87 17 chr13 94221768 94221999 -26062313 + L1MC2 LINE L1 5385 5631 -713 3 1303 310 285 231 26 chr13 94222073 94222307 -26062005 + L1MC2 LINE L1 6033 6314 -30 3 1303 565 242 160 38 chr13 94222383 94222671 -26061641 + RLTR15 LTR ERVK 1 323 -36 3 1303 21 0 0 0 chr13 94222852 94222873 -26061439 + AT_rich Low_complexity Low_complexity 1 21 0 3 1303 248 163 47 0 chr13 94223617 94223660 -26060652 + MIRb SINE MIR 209 253 -15 3 1303 527 177 153 8 chr13 94224093 94224224 -26060088 + B1_Mur4 SINE Alu 1 150 0 3 1303 219 322 78 0 chr13 94224336 94224426 -26059886 + ID_B1 SINE B4 95 191 -33 3 1303 180 0 0 0 chr13 94224638 94224658 -26059654 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1303 507 222 41 24 chr13 94225412 94225595 -26058717 - ORR1C2 LTR MaLR 0 384 270 3 1303 24 67 0 0 chr13 94225731 94225776 -26058536 + AT_rich Low_complexity Low_complexity 1 45 0 3 1303 303 222 53 40 chr13 94225945 94226020 -26058292 + B1_Mur1 SINE Alu 73 148 -1 3 1303 425 294 124 32 chr13 94226914 94227100 -26057212 - B3 SINE B2 -12 204 2 3 1303 528 248 261 0 chr13 94227131 94227292 -26057020 + B3 SINE B2 1 203 -13 3 1303 324 261 155 13 chr13 94227520 94227675 -26056637 + L1M4 LINE L1 5191 5367 -779 3 1303 289 281 22 145 chr13 94228076 94228255 -26056057 + MT2B2 LTR ERVL 100 256 -328 3 1303 645 212 43 7 chr13 94228162 94228300 -26056012 + B1_Mur3 SINE Alu 7 149 0 3 1303 702 230 242 14 chr13 94228502 94228820 -26055492 + ORR1D1 LTR MaLR 3 374 0 3 1303 1020 274 124 16 chr13 94228850 94229213 -26055099 + MTD LTR MaLR 18 419 0 3 1303 321 328 162 8 chr13 94229257 94229374 -26054938 + B4 SINE B4 158 292 0 3 1303 227 264 0 0 chr13 94229385 94229438 -26054874 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1303 726 183 68 8 chr13 94229882 94230014 -26054298 + B1_Mur2 SINE Alu 9 148 -1 3 1303 442 291 115 55 chr13 94230034 94230196 -26054116 + B3 SINE B2 5 185 -31 3 1303 219 69 0 0 chr13 94230196 94230225 -26054087 + (CATA)n Simple_repeat Simple_repeat 4 32 0 4 1303 442 291 115 55 chr13 94230225 94230262 -26054050 + B3 SINE B2 186 216 0 3 1303 365 140 10 77 chr13 94230264 94230351 -26053961 + B1F1 SINE Alu 43 149 0 4 1303 303 146 0 0 chr13 94230550 94230591 -26053721 + PB1D9 SINE Alu 10 50 -70 4 1303 461 319 66 0 chr13 94230813 94230979 -26053333 + B3A SINE B2 6 182 -16 4 1303 1156 207 14 9 chr13 94231233 94231448 -26052864 - B3 SINE B2 0 216 1 4 1303 74 23 0 0 chr13 94232128 94232216 -26052096 + AT_rich Low_complexity Low_complexity 1 88 0 4 1303 28 0 0 0 chr13 94232822 94232850 -26051462 + AT_rich Low_complexity Low_complexity 1 28 0 4 1303 1333 34 0 0 chr13 94232859 94233006 -26051306 + B1_Mus2 SINE Alu 1 147 0 4 1303 1165 260 126 30 chr13 94233148 94233640 -26050672 + RLTR40 LTR ERVK 62 600 -217 4 1303 1867 123 173 0 chr13 94234079 94234403 -26049909 + RLTR14 LTR ERV1 3 382 0 4 1303 631 100 318 0 chr13 94234967 94235077 -26049235 + B1_Mus2 SINE Alu 2 146 -1 4 1303 223 316 0 0 chr13 94235339 94235396 -26048916 + B1F SINE Alu 1 57 -92 4 1303 547 188 205 0 chr13 94235442 94235554 -26048758 + B1_Mus2 SINE Alu 6 140 -7 4 1303 1204 199 19 14 chr13 94235562 94235771 -26048541 + B3 SINE B2 1 210 -6 4 1303 296 315 0 21 chr13 94236056 94236150 -26048162 - L2 LINE L2 -1052 2367 2276 4 1303 486 0 0 0 chr13 94236150 94236204 -26048108 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1303 244 229 180 0 chr13 94236524 94236585 -26047727 + ID4 SINE ID 2 73 -10 4 1303 316 272 298 31 chr13 94236948 94237304 -26047008 + LTR50 LTR ERVL 295 745 -50 4 1303 601 195 88 120 chr13 94238159 94238190 -26046122 - B2_Mm2 SINE B2 -8 187 159 4 1303 350 85 17 0 chr13 94238190 94238249 -26046063 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1303 833 195 88 120 chr13 94238249 94238409 -26045903 - B3A SINE B2 -37 158 2 4 1303 950 272 105 12 chr13 94238645 94239065 -26045247 + L1MA8 LINE L1 5311 5772 -540 4 1303 491 234 145 34 chr13 94239187 94239447 -26044865 + L1MA8 LINE L1 5962 6242 -49 4 1303 283 133 85 85 chr13 94240169 94240251 -26044061 + ID_B1 SINE B4 143 224 0 4 1304 1913 162 56 60 chr13 94241149 94241562 -26042750 + MTD LTR MaLR 1 411 -8 4 1304 29 0 0 0 chr13 94241708 94241737 -26042575 + AT_rich Low_complexity Low_complexity 1 29 0 4 1304 26 50 0 0 chr13 94242461 94242501 -26041811 + AT_rich Low_complexity Low_complexity 1 40 0 4 1304 617 269 83 12 chr13 94243013 94243182 -26041130 + MTD LTR MaLR 1 181 -238 4 1304 253 333 0 0 chr13 94243196 94243271 -26041041 + ID_B1 SINE B4 143 217 -7 4 1304 697 187 119 36 chr13 94243476 94243670 -26040642 + B3 SINE B2 6 215 -1 4 1304 711 44 0 0 chr13 94243888 94243979 -26040333 + L1Md_T LINE L1 6492 6582 0 4 1304 358 244 13 0 chr13 94244337 94244415 -26039897 + L1MCa LINE L1 468 546 -6205 4 1304 246 303 0 73 chr13 94244433 94244515 -26039797 + ID4_ SINE ID 2 77 -6 4 1304 1750 133 123 0 chr13 94244575 94244868 -26039444 - ORR1A4 LTR MaLR 0 329 1 4 1304 15333 28 4 0 chr13 94244994 94247402 -26036910 - L1Md_T LINE L1 0 6582 4160 4 1304 639 257 50 63 chr13 94247415 94247742 -26036570 + L1MCa LINE L1 474 991 -5760 4 1304 1348 116 29 5 chr13 94247796 94248004 -26036308 - URR1A DNA MER1_type -12 214 2 4 1304 509 267 38 77 chr13 94248004 94248029 -26036283 + CYRA11_Mm Unknown Y-chromosome 183 406 -211 4 1304 275 246 93 32 chr13 94248030 94248230 -26036082 + L1MCa LINE L1 884 1191 -5560 4 1304 985 211 196 46 chr13 94248206 94248747 -26035565 + L1MCa LINE L1 2718 3339 -3225 4 1304 502 291 94 16 chr13 94248760 94248950 -26035362 + B3A SINE B2 6 213 -3 4 1304 239 217 142 73 chr13 94248970 94249081 -26035231 + L1MCa LINE L1 3361 3465 -3099 4 1304 1026 124 87 33 chr13 94249081 94249238 -26035074 + B2_Mm2 SINE B2 2 169 -26 4 1304 1259 41 7 0 chr13 94249238 94249384 -26034928 + B1_Mus1 SINE Alu 2 148 0 4 1304 1026 124 87 33 chr13 94249384 94249410 -26034902 + B2_Mm2 SINE B2 170 195 0 4 1304 239 217 142 73 chr13 94249410 94249502 -26034810 + L1MCa LINE L1 3466 3577 -2987 4 1304 270 0 0 0 chr13 94249568 94249598 -26034714 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1304 253 195 188 35 chr13 94249630 94249715 -26034597 + B1_Mur1 SINE Alu 43 140 -9 4 1304 1104 68 7 0 chr13 94249841 94249987 -26034325 + B1_Mus1 SINE Alu 2 148 0 4 1304 180 152 0 0 chr13 94249987 94250020 -26034292 + A-rich Low_complexity Low_complexity 1 33 0 4 1304 409 261 71 9 chr13 94250735 94250847 -26033465 + B1F SINE Alu 6 124 -25 4 1304 21 57 0 0 chr13 94251145 94251180 -26033132 + AT_rich Low_complexity Low_complexity 1 35 0 4 1304 677 168 84 0 chr13 94251205 94251336 -26032976 + B3 SINE B2 61 202 -14 4 1304 1113 57 42 14 chr13 94251363 94251505 -26032807 - B1_Mm SINE Alu 0 147 2 4 1304 451 239 36 9 chr13 94251650 94251760 -26032552 + PB1D9 SINE Alu 1 113 -7 4 1304 2657 135 37 42 chr13 94251917 94252372 -26031940 + RLTR11B LTR ERVK 1 453 0 4 1304 315 136 56 70 chr13 94252492 94252563 -26031749 - URR1B DNA MER1_type -5 220 151 4 1304 1470 65 11 11 chr13 94252579 94252767 -26031545 + B2_Mm2 SINE B2 2 189 -6 4 1304 6168 109 65 14 chr13 94252797 94253821 -26030491 + Lx3B LINE L1 5637 6636 -337 4 1304 603 201 15 117 chr13 94253985 94254146 -26030166 + B3 SINE B2 45 199 -17 4 1304 467 282 57 69 chr13 94254187 94254203 -26030109 + B4 SINE B4 70 144 -148 4 1304 721 187 43 14 chr13 94254203 94254344 -26029968 + B1_Mm SINE Alu 2 146 -1 4 1304 467 282 57 69 chr13 94254344 94254362 -26029950 + B4 SINE B4 145 242 -50 4 1304 1195 88 0 0 chr13 94254401 94254549 -26029763 + B1_Mus1 SINE Alu 1 148 0 4 1304 643 226 152 6 chr13 94254968 94255133 -26029179 + ID_B1 SINE B4 28 216 -8 4 1304 459 307 10 0 chr13 94255418 94255519 -26028793 - PB1D10 SINE Alu -11 106 5 4 1304 25 0 0 0 chr13 94256118 94256143 -26028169 + AT_rich Low_complexity Low_complexity 1 25 0 4 1304 658 207 142 49 chr13 94257157 94257340 -26026972 + B3 SINE B2 9 208 -8 4 1304 1185 82 0 7 chr13 94257473 94257607 -26026705 + B1_Mus1 SINE Alu 2 135 -13 4 1304 261 75 0 0 chr13 94257607 94257647 -26026665 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 4 1304 1185 82 0 7 chr13 94257647 94257660 -26026652 + B1_Mus1 SINE Alu 136 147 -1 4 1304 195 125 0 0 chr13 94257669 94257709 -26026603 + (A)n Simple_repeat Simple_repeat 1 40 0 4 1304 207 0 0 0 chr13 94257734 94257757 -26026555 + (TG)n Simple_repeat Simple_repeat 1 23 0 4 1304 385 207 67 22 chr13 94257866 94257955 -26026357 - ID_B1 SINE B4 -24 200 108 4 1304 332 252 75 37 chr13 94258026 94258133 -26026179 - PB1D9 SINE Alu -9 111 1 4 1304 222 259 116 12 chr13 94258181 94258267 -26026045 - B1F SINE Alu -45 104 10 4 1304 1554 33 66 0 chr13 94258972 94259155 -26025157 + B2_Mm2 SINE B2 1 195 0 4 1304 642 234 229 54 chr13 94259232 94259472 -26024840 + B4A SINE B4 4 285 -7 4 1304 243 88 0 0 chr13 94259472 94259506 -26024806 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1304 292 252 88 66 chr13 94259525 94259661 -26024651 + ID_B1 SINE B4 78 216 -8 4 1304 1861 153 88 3 chr13 94259733 94260061 -26024251 + RLTR15 LTR ERVK 4 359 0 4 1304 712 134 24 0 chr13 94260399 94260526 -26023786 - URR1B DNA MER1_type -3 222 93 4 1304 1969 123 32 13 chr13 94260545 94260859 -26023453 + ORR1A2 LTR MaLR 1 320 -7 4 1304 460 79 16 0 chr13 94260944 94261007 -26023305 - B1_Mus2 SINE Alu -11 136 73 4 1304 611 130 28 45 chr13 94260997 94261128 -26023184 + ORR1B1 LTR MaLR 241 394 0 4 1304 358 255 82 62 chr13 94262697 94262843 -26021469 + B1_Mur1 SINE Alu 1 149 0 4 1304 369 0 0 0 chr13 94262910 94262951 -26021361 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1304 423 0 0 0 chr13 94262951 94262997 -26021315 + (GA)n Simple_repeat Simple_repeat 2 48 0 4 1304 276 274 0 27 chr13 94263025 94263100 -26021212 - B1F SINE Alu -69 80 8 4 1304 906 60 85 124 chr13 94263123 94263276 -26021036 + B1_Mm SINE Alu 1 147 0 4 1304 24 0 0 0 chr13 94263276 94263300 -26021012 + AT_rich Low_complexity Low_complexity 1 24 0 4 1304 532 222 33 25 chr13 94263326 94263446 -26020866 + B1_Mur2 SINE Alu 1 121 -28 4 1304 1160 263 48 16 chr13 94263485 94263661 -26020651 + MTEa LTR MaLR 1 178 -201 4 1304 1118 72 0 0 chr13 94263661 94263800 -26020512 + B1_Mus2 SINE Alu 1 139 -8 4 1304 234 0 0 0 chr13 94263800 94263826 -26020486 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1304 1160 263 48 16 chr13 94263826 94263961 -26020351 + MTEa LTR MaLR 179 322 -57 4 1304 926 130 14 123 chr13 94264083 94264294 -26020018 + URR1B DNA MER1_type 35 222 -3 4 1304 290 256 51 0 chr13 94264297 94264375 -26019937 + PB1D10 SINE Alu 26 107 -10 4 1304 1241 49 0 7 chr13 94264550 94264693 -26019619 + B1_Mus1 SINE Alu 2 143 -5 4 1304 402 248 62 39 chr13 94265110 94265240 -26019072 - ID_B1 SINE B4 -64 160 28 4 1304 298 220 51 0 chr13 94265307 94265366 -26018946 + PB1D10 SINE Alu 28 89 -28 4 1304 227 304 62 25 chr13 94265554 94265635 -26018677 + ID SINE ID 2 85 -139 4 1304 411 311 13 45 chr13 94266445 94266474 -26017838 + ID_B1 SINE B4 65 214 -10 4 1304 514 262 40 0 chr13 94266474 94266600 -26017712 + B1F SINE Alu 9 139 -10 4 1304 582 202 76 0 chr13 94267084 94267203 -26017109 - B1_Mur2 SINE Alu -9 140 13 4 1304 21 36 0 0 chr13 94268759 94268787 -26015525 + GC_rich Low_complexity Low_complexity 1 28 0 4 1304 186 167 0 0 chr13 94269752 94269788 -26014524 + (CGG)n Simple_repeat Simple_repeat 3 38 0 4 1304 243 200 11 56 chr13 94269790 94269880 -26014432 + (CCCCG)n Simple_repeat Simple_repeat 4 89 0 4 1304 436 250 46 0 chr13 94270396 94270504 -26013808 + PB1D9 SINE Alu 1 113 -7 4 1304 1181 81 0 0 chr13 94270813 94270961 -26013351 - B1_Mus1 SINE Alu 0 148 1 4 1304 207 0 0 0 chr13 94271016 94271039 -26013273 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1304 440 223 21 0 chr13 94271175 94271269 -26013043 + B1_Mur3 SINE Alu 3 98 -51 4 1304 363 176 0 32 chr13 94271269 94271363 -26012949 + G-rich Low_complexity Low_complexity 1 91 0 4 1304 316 288 12 12 chr13 94271363 94271444 -26012868 + ID4_ SINE ID 1 81 -2 5 1304 207 88 0 0 chr13 94271544 94271578 -26012734 + (T)n Simple_repeat Simple_repeat 1 34 0 5 1304 279 292 111 19 chr13 94271667 94271775 -26012537 + PB1D7 SINE Alu 2 119 -1 5 1304 302 326 67 0 chr13 94272759 94272848 -26011464 - PB1D10 SINE Alu -17 100 6 5 1304 453 217 9 28 chr13 94272903 94273012 -26011300 - B1_Mur1 SINE Alu -2 147 41 5 1304 251 149 0 41 chr13 94273027 94273076 -26011236 - PB1D9 SINE Alu -61 59 13 5 1304 303 301 115 20 chr13 94273424 94273519 -26010793 + ID_B1 SINE B4 70 170 -54 5 1304 3702 141 62 21 chr13 94273519 94274213 -26010099 - RMER6A LTR ERVK 0 756 1 5 1304 1312 168 42 5 chr13 94274646 94274862 -26009450 - URR1B DNA MER1_type -1 224 1 5 1304 399 292 0 40 chr13 94275379 94275479 -26008833 - B1_Mur3 SINE Alu -52 97 2 5 1304 699 258 36 71 chr13 94276255 94276451 -26007861 - B3 SINE B2 -19 197 9 5 1304 888 196 0 26 chr13 94276525 94276677 -26007635 + B1_Mur1 SINE Alu 2 149 0 5 1304 239 307 130 77 chr13 94276843 94277051 -26007261 - LTR16B1 LTR ERVL -145 335 117 5 1304 1330 38 0 0 chr13 94277123 94277283 -26007029 + B2_Mm1a SINE B2 2 161 -32 5 1304 375 78 0 0 chr13 94277283 94277334 -26006978 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 5 1304 215 282 105 12 chr13 94277345 94277431 -26006881 + PB1D10 SINE Alu 1 94 -23 5 1304 384 59 0 0 chr13 94277576 94277627 -26006685 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1304 2109 85 11 0 chr13 94277638 94277919 -26006393 - ORR1A3 LTR MaLR -42 284 1 5 1304 242 111 0 118 chr13 94277919 94277966 -26006346 - B3A SINE B2 -156 42 2 5 1304 326 301 137 2 chr13 94278602 94278810 -26005502 - LTR16D2 LTR ERVL -254 421 131 5 1304 185 0 40 0 chr13 94279082 94279107 -26005205 + (TTTTTG)n Simple_repeat Simple_repeat 5 30 0 5 1304 773 193 21 0 chr13 94279107 94279252 -26005060 - B1_Mur2 SINE Alu 0 149 2 5 1304 479 333 46 29 chr13 94279308 94279483 -26004829 - B3A SINE B2 -3 213 36 5 1304 819 184 7 0 chr13 94279487 94279623 -26004689 + B1_Mur2 SINE Alu 3 139 -10 5 1304 367 239 21 21 chr13 94279808 94279902 -26004410 - B3A SINE B2 -104 94 1 5 1304 803 153 49 42 chr13 94279919 94280062 -26004250 - B1_Mus2 SINE Alu -1 146 3 5 1304 320 271 42 20 chr13 94280338 94280453 -26003859 + B1F SINE Alu 9 120 0 5 1304 277 338 0 0 chr13 94281492 94281566 -26002746 + ID_B1 SINE B4 82 155 -69 5 1304 1413 181 100 23 chr13 94281563 94281914 -26002398 - RMER10B LTR ERVL -20 378 1 5 1304 1099 222 9 0 chr13 94282067 94282279 -26002033 - B3 SINE B2 0 216 3 5 1304 1688 120 62 110 chr13 94282322 94282393 -26001919 - ORR1A2 LTR MaLR -8 338 305 5 1304 3447 90 34 2 chr13 94282393 94282871 -26001441 - L1_Mus3 LINE L1 0 6638 6146 5 1304 2034 81 7 0 chr13 94282871 94283154 -26001158 - ORR1A2 LTR MaLR -42 285 1 5 1304 776 128 8 0 chr13 94283170 94283303 -26001009 + (TTTC)n Simple_repeat Simple_repeat 3 136 0 5 1304 551 192 67 0 chr13 94283316 94283420 -26000892 - B1_Mus1 SINE Alu -21 127 17 5 1304 238 303 8 107 chr13 94283339 94283461 -26000851 - MT2B LTR ERVL -349 252 143 5 1304 1047 75 0 109 chr13 94283520 94283685 -26000627 - B1_Mus2 SINE Alu 0 147 1 5 1304 284 269 0 15 chr13 94283687 94283755 -26000557 - ID_B1 SINE B4 -1 223 157 5 1304 781 196 0 33 chr13 94283904 94284057 -26000255 - B1_Mur2 SINE Alu 0 149 2 5 1304 517 226 26 9 chr13 94284460 94284576 -25999736 - B1_Mur1 SINE Alu -31 118 1 5 1304 390 313 0 30 chr13 94284576 94284595 -25999717 - ID_B1 SINE B4 -28 196 66 5 1304 318 318 146 9 chr13 94284616 94284829 -25999483 + RLTR42-int LTR ERVK 1159 1400 -4122 5 1304 618 279 115 10 chr13 94285190 94285382 -25998930 - B4A SINE B4 -80 212 1 5 1304 247 342 14 14 chr13 94285651 94285725 -25998587 - ID4 SINE ID -9 74 1 5 1304 609 99 36 0 chr13 94285726 94285837 -25998475 + (TCTA)n Simple_repeat Simple_repeat 2 116 0 5 1304 530 42 28 0 chr13 94285839 94285911 -25998401 + (TTTC)n Simple_repeat Simple_repeat 4 77 0 5 1304 271 275 29 0 chr13 94285926 94285995 -25998317 - PB1D10 SINE Alu -43 74 4 5 1304 336 333 95 21 chr13 94286322 94286512 -25997800 - MLT1G LTR MaLR -347 244 41 5 1304 594 135 0 0 chr13 94286591 94286695 -25997617 + (TGGA)n Simple_repeat Simple_repeat 1 104 0 5 1304 382 242 3 17 chr13 94286721 94286824 -25997488 + ID2 SINE ID 5 103 -49 5 1304 356 318 37 0 chr13 94286829 94286936 -25997376 + PB1D10 SINE Alu 2 112 -5 5 1304 310 337 11 0 chr13 94287197 94287289 -25997023 + PB1D7 SINE Alu 21 113 -7 5 1304 353 304 25 34 chr13 94287367 94287486 -25996826 + B1F SINE Alu 10 127 -22 5 1304 205 336 35 7 chr13 94287857 94287922 -25996390 + (TATATG)n Simple_repeat Simple_repeat 5 69 0 5 1304 788 256 0 53 chr13 94287922 94288112 -25996200 - B3A SINE B2 -16 182 3 5 1304 205 336 35 7 chr13 94288112 94288187 -25996125 + (TATATG)n Simple_repeat Simple_repeat 4 82 0 5 1304 393 319 35 42 chr13 94288206 94288350 -25995962 - RSINE1 SINE B4 -19 146 4 5 1304 243 0 0 0 chr13 94288566 94288593 -25995719 + (TCCTG)n Simple_repeat Simple_repeat 2 28 0 5 1304 398 292 6 18 chr13 94288908 94289070 -25995242 + MLT1F LTR MaLR 382 624 0 5 1304 570 29 0 0 chr13 94289183 94289251 -25995061 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 1304 315 0 0 0 chr13 94289257 94289292 -25995020 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1304 465 263 14 42 chr13 94289329 94289472 -25994840 - RSINE1 SINE B4 -11 154 16 5 1304 615 62 0 0 chr13 94289472 94289552 -25994760 + (TCTA)n Simple_repeat Simple_repeat 2 81 0 5 1304 2518 254 113 67 chr13 94289552 94290520 -25993792 - RMER1A Other Other -4 1026 15 5 1304 1104 247 0 46 chr13 94290523 94290786 -25993526 - RMER1A Other Other -631 399 149 5 1304 3963 184 137 7 chr13 94290794 94291864 -25992448 + Lx5 LINE L1 5845 7050 0 5 1304 400 201 57 6 chr13 94292357 94292466 -25991846 - MER34 LTR ERV1 -66 505 381 5 1304 23 33 0 0 chr13 94293049 94293079 -25991233 + AT_rich Low_complexity Low_complexity 1 30 0 5 1304 191 174 47 0 chr13 94293100 94293186 -25991126 + (TA)n Simple_repeat Simple_repeat 2 91 0 5 1304 1207 61 0 0 chr13 94293214 94293361 -25990951 - B1_Mm SINE Alu 0 147 1 5 1304 664 250 137 0 chr13 94293361 94293529 -25990783 - ID_B1 SINE B4 -33 191 1 5 1304 545 229 0 24 chr13 94293551 94293676 -25990636 - B1F1 SINE Alu -1 148 27 5 1304 236 189 19 0 chr13 94293874 94293927 -25990385 - PB1D10 SINE Alu -15 102 49 5 1304 1091 84 7 0 chr13 94294134 94294288 -25990024 + B2_Mm1a SINE B2 1 155 -38 5 1304 4108 31 2 108 chr13 94294288 94294861 -25989451 - RLTR1B LTR ERV1 0 512 1 5 1304 348 296 108 30 chr13 94295052 94295126 -25989186 + RLTR20C LTR ERVK 355 443 -91 5 1304 675 25 0 0 chr13 94295126 94295207 -25989105 + (TG)n Simple_repeat Simple_repeat 2 82 0 5 1304 348 296 108 30 chr13 94295207 94295299 -25989013 + RLTR20C LTR ERVK 444 534 0 5 1304 22 0 0 0 chr13 94295305 94295327 -25988985 + AT_rich Low_complexity Low_complexity 1 22 0 5 1304 549 187 9 9 chr13 94295347 94295455 -25988857 + B1_Mur2 SINE Alu 21 128 -21 5 1304 300 293 0 0 chr13 94295474 94295549 -25988763 + ID4 SINE ID 2 76 -7 5 1304 372 250 60 0 chr13 94295592 94295692 -25988620 + B1F1 SINE Alu 36 141 -8 5 1304 21 0 0 0 chr13 94296080 94296101 -25988211 + AT_rich Low_complexity Low_complexity 1 21 0 5 1304 619 230 74 0 chr13 94296116 94296251 -25988061 + B1F1 SINE Alu 5 149 0 5 1304 1165 246 70 3 chr13 94296542 94296884 -25987428 - ORR1D2 LTR MaLR -5 365 1 5 1304 392 306 14 7 chr13 94296963 94297101 -25987211 + RMER15 LTR ERVL 422 560 -15 5 1304 478 161 21 31 chr13 94297113 94297209 -25987103 + MER31-int LTR ERV1 3889 3983 -953 5 1304 739 177 35 7 chr13 94297218 94297360 -25986952 + B1_Mur2 SINE Alu 4 149 0 5 1304 353 309 9 9 chr13 94297393 94297504 -25986808 + MER31-int LTR ERV1 3975 4085 -851 5 1304 333 0 0 0 chr13 94297927 94297964 -25986348 + (GA)n Simple_repeat Simple_repeat 1 37 0 5 1304 293 191 0 87 chr13 94297966 94298035 -25986277 + PB1D7 SINE Alu 18 80 -40 5 1304 835 188 0 32 chr13 94298051 94298205 -25986107 + B1_Mur3 SINE Alu 1 149 0 5 1304 1193 61 0 0 chr13 94298208 94298355 -25985957 + B1_Mm SINE Alu 1 147 0 5 1304 841 175 153 44 chr13 94298503 94298706 -25985606 + URR1B DNA MER1_type 1 225 0 5 1304 286 295 169 67 chr13 94298754 94298932 -25985380 + B4A SINE B4 86 281 -11 5 1304 214 247 39 64 chr13 94299919 94299997 -25984315 + PB1 SINE Alu 22 97 -30 5 1304 557 236 53 73 chr13 94300152 94300303 -25984009 + B1_Mur1 SINE Alu 2 149 0 5 1304 508 186 0 37 chr13 94300308 94300470 -25983842 + GA-rich Low_complexity Low_complexity 2 157 0 5 1304 390 21 0 0 chr13 94300477 94300524 -25983788 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 5 1304 1209 62 0 0 chr13 94300524 94300669 -25983643 - B1_Mus1 SINE Alu -2 146 2 5 1304 695 264 71 5 chr13 94301015 94301213 -25983099 + B3 SINE B2 3 213 -3 5 1304 222 173 40 0 chr13 94301584 94301659 -25982653 + CT-rich Low_complexity Low_complexity 2 79 0 5 1304 414 252 46 61 chr13 94301673 94301804 -25982508 - B1_Mur2 SINE Alu -19 130 2 5 1304 450 0 0 0 chr13 94301970 94302020 -25982292 + (TCTG)n Simple_repeat Simple_repeat 2 51 0 6 1304 351 0 0 0 chr13 94302783 94302822 -25981490 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1304 353 208 0 0 chr13 94303113 94303190 -25981122 + ORR1E LTR MaLR 57 133 -226 6 1304 619 53 96 0 chr13 94303220 94303314 -25980998 - B2_Mm1a SINE B2 0 193 91 6 1304 244 274 149 9 chr13 94303431 94303545 -25980767 + ORR1E LTR MaLR 249 378 -1 6 1304 2403 80 9 33 chr13 94304286 94304621 -25979691 + IAPLTR2b LTR ERVK 1 327 0 6 1304 3666 92 22 42 chr13 94304622 94305453 -25978859 + IAPEz-int LTR ERVK 9 662 -5819 6 1304 962 59 0 0 chr13 94305453 94305572 -25978740 + IAPEz-int LTR ERVK 1359 1477 -5004 6 1304 1913 86 4 0 chr13 94305573 94305818 -25978494 + IAPEz-int LTR ERVK 2252 2497 -5183 6 1304 14452 56 8 3 chr13 94305845 94307608 -25976704 + IAPEz-int LTR ERVK 4708 6479 -2 6 1304 2373 89 9 33 chr13 94307610 94307945 -25976367 + IAPLTR2b LTR ERVK 1 327 0 6 1304 1232 48 0 0 chr13 94308180 94308327 -25975985 + B1_Mm SINE Alu 1 147 0 6 1304 203 257 132 9 chr13 94308523 94308637 -25975675 + MIR SINE MIR 28 155 -107 6 1304 329 218 8 0 chr13 94308777 94308901 -25975411 + (TG)n Simple_repeat Simple_repeat 2 126 0 6 1304 217 274 81 0 chr13 94309737 94309799 -25974513 + PB1 SINE Alu 2 68 -59 6 1304 1429 167 30 148 chr13 94309809 94310274 -25974038 - RMER17C LTR ERVK 0 410 1 6 1304 1810 130 29 0 chr13 94310274 94310550 -25973762 - RMER17C-int LTR ERVK 0 3238 2955 6 1304 1967 91 159 118 chr13 94310552 94310750 -25973562 - RMER17C-int LTR ERVK -443 2795 2552 6 1304 271 200 0 0 chr13 94310750 94310795 -25973517 + LSU-rRNA_Hsa rRNA rRNA 4202 4246 -789 6 1304 1967 91 159 118 chr13 94310795 94310832 -25973480 - RMER17C-int LTR ERVK -443 2551 2504 6 1304 441 0 0 0 chr13 94310832 94310881 -25973431 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1304 1967 143 90 96 chr13 94310881 94311278 -25973034 - RMER17C-int LTR ERVK -735 2503 2199 6 1304 1798 98 21 14 chr13 94311278 94311568 -25972744 - RMER16 LTR ERVK 0 533 242 6 1304 284 169 79 63 chr13 94311568 94311631 -25972681 - ETnERV2-int LTR ERVK -4866 2540 2477 6 1304 8569 34 3 0 chr13 94311631 94312990 -25971322 - L1Md_F2 LINE L1 -1 6581 5218 6 1304 1660 26 0 20 chr13 94313195 94313391 -25970921 - B2_Mm1a SINE B2 0 193 2 6 1304 1298 20 0 0 chr13 94313407 94313554 -25970758 - B1_Mm SINE Alu 0 147 1 6 1304 503 148 0 90 chr13 94313613 94313724 -25970588 - RMER17C-int LTR ERVK -2716 522 422 6 1304 393 164 0 29 chr13 94313755 94313824 -25970488 - RMER17C-int LTR ERVK -2800 438 372 6 1304 410 247 28 94 chr13 94313829 94314084 -25970228 - RMER17C LTR ERVK -172 238 1 6 1304 222 217 0 0 chr13 94314084 94314128 -25970184 + PB1 SINE Alu 82 125 -2 6 1304 2859 137 14 14 chr13 94314226 94314736 -25969576 - RLTR28 LTR ERVL -14 510 1 6 1304 294 322 25 34 chr13 94314980 94315099 -25969213 - B1F SINE Alu -9 140 23 6 1304 317 295 0 10 chr13 94315009 94315105 -25969207 - ID_B1 SINE B4 -32 192 98 6 1304 766 193 0 14 chr13 94315260 94315402 -25968910 + B1_Mur3 SINE Alu 10 149 0 6 1304 548 223 0 10 chr13 94315434 94315536 -25968776 + B1_Mur1 SINE Alu 13 113 -36 6 1304 383 207 37 0 chr13 94315536 94315618 -25968694 + B4A SINE B4 1 85 -207 6 1304 221 163 20 0 chr13 94315757 94315806 -25968506 + (TTG)n Simple_repeat Simple_repeat 2 51 0 6 1304 319 265 69 56 chr13 94316063 94316207 -25968105 + MLT1E3 LTR MaLR 33 178 -446 6 1304 383 230 24 96 chr13 94316954 94317079 -25967233 - B1F2 SINE Alu -31 118 3 6 1304 1237 48 0 0 chr13 94317094 94317241 -25967071 - B1_Mus2 SINE Alu 0 147 1 6 1304 339 25 0 0 chr13 94317269 94317309 -25967003 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1304 251 321 61 18 chr13 94317317 94317431 -25966881 - MER5A DNA MER1_type -11 178 60 6 1304 295 263 39 29 chr13 94317432 94317534 -25966778 + PB1D7 SINE Alu 3 105 -15 6 1304 1431 68 5 10 chr13 94318099 94318292 -25966020 - B2_Mm1t SINE B2 -1 192 1 6 1304 287 207 28 0 chr13 94318333 94318478 -25965834 + CT-rich Low_complexity Low_complexity 2 150 0 6 1304 283 206 15 31 chr13 94318480 94318545 -25965767 - ID_B1 SINE B4 -13 211 148 6 1304 999 154 106 20 chr13 94319987 94320186 -25964126 + B3 SINE B2 1 216 0 6 1304 195 129 0 0 chr13 94320222 94320253 -25964059 + (TTA)n Simple_repeat Simple_repeat 1 31 0 6 1304 395 247 0 0 chr13 94320254 94320343 -25963969 - B1F1 SINE Alu -3 146 58 6 1304 683 257 57 26 chr13 94320641 94320869 -25963443 - RLTR16 LTR ERVK -236 269 35 6 1304 1164 75 0 0 chr13 94320869 94321015 -25963297 + B1_Mus2 SINE Alu 2 147 0 6 1304 306 0 0 0 chr13 94321015 94321049 -25963263 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1304 361 258 0 0 chr13 94321085 94321151 -25963161 - PB1D9 SINE Alu -54 66 1 6 1304 261 0 0 0 chr13 94321155 94321184 -25963128 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6 1304 481 305 0 23 chr13 94321190 94321321 -25962991 - ID_B1 SINE B4 -13 211 84 6 1304 989 33 107 0 chr13 94321869 94321990 -25962322 - B1_Mm SINE Alu -13 134 1 6 1304 443 219 167 0 chr13 94322678 94322792 -25961520 + B1_Mur2 SINE Alu 2 134 -15 6 1304 567 0 0 0 chr13 94322793 94322856 -25961456 + (CAAAA)n Simple_repeat Simple_repeat 5 67 0 6 1304 1183 62 0 0 chr13 94324328 94324474 -25959838 + B1_Mus1 SINE Alu 3 148 0 6 1304 473 252 30 30 chr13 94324493 94324628 -25959684 - B1_Mur3 SINE Alu -13 136 2 6 1304 2140 165 50 8 chr13 94324918 94325320 -25958992 + MTC LTR MaLR 1 407 -14 6 1304 267 152 0 0 chr13 94325322 94325368 -25958944 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 6 1304 24 53 0 0 chr13 94325373 94325411 -25958901 + AT_rich Low_complexity Low_complexity 1 38 0 6 1304 542 242 14 64 chr13 94325418 94325559 -25958753 + B1F2 SINE Alu 2 135 -14 6 1304 629 259 14 0 chr13 94325587 94325726 -25958586 + B1F SINE Alu 1 141 -8 6 1304 339 235 39 48 chr13 94326525 94326628 -25957684 - B1F SINE Alu 0 149 48 6 1304 283 275 114 64 chr13 94326530 94326670 -25957642 - ID_B1 SINE B4 -1 223 77 6 1304 2847 114 11 59 chr13 94326734 94327210 -25957102 + RLTR11B LTR ERVK 1 453 0 6 1304 705 313 18 9 chr13 94327532 94327761 -25956551 + B4A SINE B4 1 231 -61 6 1304 672 171 0 16 chr13 94327763 94327888 -25956424 + B1_Mus2 SINE Alu 25 147 0 6 1304 441 245 46 137 chr13 94327764 94327939 -25956373 + B4A SINE B4 111 269 -23 6 1304 499 103 10 10 chr13 94327940 94328038 -25956274 + (CA)n Simple_repeat Simple_repeat 1 98 0 6 1304 682 200 56 21 chr13 94328099 94328242 -25956070 + B1_Mur1 SINE Alu 2 149 0 6 1304 639 0 0 0 chr13 94328953 94329024 -25955288 + (TTA)n Simple_repeat Simple_repeat 2 72 0 6 1304 1093 79 0 0 chr13 94329024 94329163 -25955149 - B1_Mus1 SINE Alu -9 139 1 6 1304 241 135 39 0 chr13 94329254 94329306 -25955006 + CT-rich Low_complexity Low_complexity 2 55 0 6 1304 1081 121 49 16 chr13 94329307 94329492 -25954820 - B2_Mm2 SINE B2 0 195 5 6 1304 408 40 0 0 chr13 94329492 94329542 -25954770 + (TTCC)n Simple_repeat Simple_repeat 1 50 0 6 1304 752 169 7 0 chr13 94329543 94329697 -25954615 + CT-rich Low_complexity Low_complexity 2 156 0 6 1304 779 196 29 0 chr13 94329698 94329836 -25954476 - B1_Mur2 SINE Alu -5 144 3 6 1304 467 17 17 0 chr13 94329838 94329898 -25954414 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 6 1304 517 230 103 7 chr13 94329933 94330069 -25954243 - RSINE1 SINE B4 -14 151 3 6 1304 704 253 90 15 chr13 94330074 94330275 -25954037 - B4A SINE B4 -68 224 9 6 1304 394 287 180 68 chr13 94330611 94330772 -25953540 + B3A SINE B2 5 183 -15 6 1304 481 229 68 0 chr13 94330927 94331045 -25953267 - ID_B1 SINE B4 0 224 99 6 1304 1658 181 46 54 chr13 94332000 94332369 -25951943 + Lx9 LINE L1 7152 7517 -127 6 1304 277 273 136 0 chr13 94332433 94332521 -25951791 + PB1D9 SINE Alu 1 100 -20 6 1304 232 409 9 0 chr13 94332813 94332923 -25951389 - B1_Mus1 SINE Alu -11 137 27 6 1304 2259 129 34 27 chr13 94333039 94333446 -25950866 + MTC LTR MaLR 2 411 -10 6 1304 1345 99 39 0 chr13 94333505 94333687 -25950625 + B2_Mm2 SINE B2 2 190 -5 6 1304 180 342 27 0 chr13 94334797 94334870 -25949442 - L2b LINE L2 0 3375 3301 6 1304 541 206 0 0 chr13 94335095 94335192 -25949120 + B1_Mur1 SINE Alu 46 142 -7 6 1304 826 154 28 14 chr13 94335204 94335349 -25948963 + B1_Mus1 SINE Alu 2 148 0 6 1304 1379 70 43 5 chr13 94335424 94335610 -25948702 + B2_Mm2 SINE B2 2 194 -1 6 1304 215 152 0 80 chr13 94336354 94336404 -25947908 - ID2 SINE ID -29 54 9 6 1304 403 208 0 0 chr13 94336836 94336908 -25947404 - ID4_ SINE ID -10 73 2 6 1304 609 255 88 35 chr13 94337253 94337513 -25946799 - MER31-int LTR ERV1 -580 4356 4083 6 1304 255 268 28 0 chr13 94337889 94337960 -25946352 - ID4 SINE ID -2 81 9 6 1304 1076 103 7 0 chr13 94338080 94338226 -25946086 - B1_Mus1 SINE Alu 0 148 2 6 1304 24 0 0 0 chr13 94338236 94338260 -25946052 + AT_rich Low_complexity Low_complexity 1 24 0 6 1304 555 233 0 136 chr13 94338262 94338431 -25945881 - B1_Mur2 SINE Alu -3 146 1 6 1304 247 229 0 62 chr13 94338467 94338532 -25945780 + B1_Mur2 SINE Alu 85 145 -4 6 1304 456 256 48 0 chr13 94338630 94338755 -25945557 + B1F2 SINE Alu 9 139 -10 6 1304 239 0 0 31 chr13 94338756 94338788 -25945524 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1304 1245 41 0 0 chr13 94338824 94338971 -25945341 + B1_Mus1 SINE Alu 2 148 0 6 1304 381 43 0 0 chr13 94339901 94339948 -25944364 + (TTCC)n Simple_repeat Simple_repeat 1 47 0 6 1304 3254 84 28 44 chr13 94339948 94340445 -25943867 - Lx LINE L1 -1 6653 6165 6 1304 1652 32 0 0 chr13 94340459 94340644 -25943668 + B2_Mm1t SINE B2 2 186 -7 6 1304 393 159 0 0 chr13 94340658 94340721 -25943591 - B1F1 SINE Alu -13 136 74 6 1304 1063 94 0 0 chr13 94340931 94341069 -25943243 + B1_Mus2 SINE Alu 2 139 -8 6 1304 318 50 0 0 chr13 94341069 94341109 -25943203 + (GGA)n Simple_repeat Simple_repeat 1 40 0 6 1304 380 265 114 29 chr13 94341113 94341253 -25943059 + B3A SINE B2 42 193 -5 7 1304 325 293 10 42 chr13 94341842 94341938 -25942374 - ID_B1 SINE B4 -104 120 28 7 1304 396 0 0 0 chr13 94342032 94342076 -25942236 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1304 292 255 270 20 chr13 94342160 94342312 -25942000 - MER34-int LTR ERV1 -7096 1111 922 7 1304 411 21 0 0 chr13 94342385 94342433 -25941879 + (TCC)n Simple_repeat Simple_repeat 2 49 0 7 1304 381 22 0 0 chr13 94342451 94342497 -25941815 + (CAGG)n Simple_repeat Simple_repeat 1 46 0 7 1304 244 258 76 0 chr13 94342497 94342563 -25941749 - ORR1D1 LTR MaLR -146 228 158 7 1304 467 281 88 48 chr13 94342636 94342909 -25941403 - MER34-int LTR ERV1 -7544 663 380 7 1304 895 171 0 0 chr13 94343339 94343479 -25940833 + B1_Mus1 SINE Alu 1 140 -8 7 1304 201 39 0 0 chr13 94343479 94343505 -25940807 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 7 1304 361 303 164 72 chr13 94343519 94343782 -25940530 + B4A SINE B4 6 292 0 7 1304 23 0 0 0 chr13 94343865 94343888 -25940424 + AT_rich Low_complexity Low_complexity 1 23 0 7 1304 342 0 0 0 chr13 94344044 94344082 -25940230 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1304 216 0 0 0 chr13 94344082 94344106 -25940206 + (TG)n Simple_repeat Simple_repeat 2 25 0 7 1304 254 182 0 0 chr13 94344150 94344194 -25940118 - PB1D7 SINE Alu 0 120 77 7 1304 506 147 21 79 chr13 94344200 94344338 -25939974 + RMER16 LTR ERVK 1 130 -403 7 1304 1100 114 14 13 chr13 94344338 94344523 -25939789 + B2_Mm2 SINE B2 1 203 -13 7 1304 384 77 0 0 chr13 94344523 94344575 -25939737 + (TA)n Simple_repeat Simple_repeat 1 52 0 7 1304 944 188 82 53 chr13 94344627 94344754 -25939558 + RMER16 LTR ERVK 242 385 -148 7 1304 778 37 9 0 chr13 94344754 94344863 -25939449 + L1Md_T LINE L1 6473 6582 0 7 1304 944 188 82 53 chr13 94344863 94345016 -25939296 + RMER16 LTR ERVK 386 529 -4 7 1304 979 81 66 0 chr13 94345041 94345177 -25939135 + B1_Mm SINE Alu 3 147 0 7 1304 17386 132 46 29 chr13 94345220 94345820 -25938492 + RMER16-int LTR ERVK 37 719 -4687 7 1304 321 26 0 0 chr13 94345820 94345858 -25938454 + (CAA)n Simple_repeat Simple_repeat 2 39 0 7 1304 17386 132 46 29 chr13 94345858 94346192 -25938120 + RMER16-int LTR ERVK 720 1068 -4338 7 1304 1004 80 58 7 chr13 94346192 94346331 -25937981 + B1_Mus1 SINE Alu 3 148 0 7 1304 17386 132 46 29 chr13 94346331 94347255 -25937057 + RMER16-int LTR ERVK 1069 1946 -3460 7 1304 1542 63 16 0 chr13 94347255 94347445 -25936867 - B2_Mm2 SINE B2 -1 194 2 7 1304 17386 132 46 29 chr13 94347445 94348472 -25935840 + RMER16-int LTR ERVK 1947 2973 -2433 7 1304 1286 80 6 22 chr13 94348473 94348653 -25935659 + B2_Mm1t SINE B2 2 178 -15 7 1304 294 101 370 10 chr13 94348686 94348786 -25935526 + B2_Mm2 SINE B2 47 182 -13 7 1304 405 0 0 0 chr13 94348786 94348831 -25935481 + (GA)n Simple_repeat Simple_repeat 2 46 0 7 1304 4874 101 33 6 chr13 94348834 94349534 -25934778 + RMER16-int LTR ERVK 2962 3680 -1726 7 1304 1093 62 14 0 chr13 94349536 94349680 -25934632 + B1_Mm SINE Alu 2 147 0 7 1304 2472 86 9 0 chr13 94349699 94350035 -25934277 + RMER16-int LTR ERVK 4615 4953 -453 7 1304 186 71 0 0 chr13 94350071 94350099 -25934213 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 7 1304 2700 115 47 59 chr13 94350127 94350333 -25933979 + RMER16-int LTR ERVK 4939 5140 -266 7 1304 2460 99 67 18 chr13 94350333 94350723 -25933589 - RLTR9E LTR ERVK 0 409 1 7 1304 2700 115 47 59 chr13 94350723 94350761 -25933551 + RMER16-int LTR ERVK 5141 5172 -234 7 1304 1034 83 0 0 chr13 94350761 94350893 -25933419 + B1_Mus1 SINE Alu 5 136 -12 7 1304 261 0 0 0 chr13 94350894 94350923 -25933389 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 7 1304 2700 115 47 59 chr13 94350923 94351146 -25933166 + RMER16-int LTR ERVK 5173 5403 -3 7 1304 1141 70 0 0 chr13 94351146 94351289 -25933023 + B1_Mm SINE Alu 2 144 -3 7 1304 756 0 0 0 chr13 94351293 94351377 -25932935 + (GAA)n Simple_repeat Simple_repeat 2 85 0 7 1304 1521 192 65 44 chr13 94351408 94351821 -25932491 + RMER16 LTR ERVK 103 524 -9 7 1304 367 215 0 0 chr13 94351826 94351891 -25932421 - PB1D7 SINE Alu -47 73 9 7 1304 243 220 0 0 chr13 94351981 94352040 -25932272 - ID4 SINE ID -23 60 2 7 1304 2940 118 31 23 chr13 94352412 94352890 -25931422 + RLTR45 LTR ERVK 1 482 0 7 1304 536 231 62 80 chr13 94353043 94353269 -25931043 - MER2 DNA MER2_type -24 321 100 7 1304 1973 167 20 42 chr13 94353266 94353667 -25930645 + RMER10B LTR ERVL 7 398 0 7 1304 244 271 0 0 chr13 94353713 94353761 -25930551 - MER2 DNA MER2_type -295 50 3 7 1304 640 273 181 43 chr13 94353762 94354110 -25930202 - L1MC2 LINE L1 -231 6113 5718 7 1304 1060 60 0 15 chr13 94354135 94354271 -25930041 - B1_Mus1 SINE Alu -14 134 1 7 1304 27 0 0 0 chr13 94354353 94354380 -25929932 + AT_rich Low_complexity Low_complexity 1 27 0 7 1304 329 140 13 0 chr13 94354413 94354477 -25929835 - B2_Mm2 SINE B2 -83 115 46 7 1304 1227 114 11 6 chr13 94354537 94354714 -25929598 - B2_Mm1t SINE B2 -14 179 2 7 1304 761 208 35 0 chr13 94354717 94354861 -25929451 - B1_Mur1 SINE Alu 0 149 1 7 1304 335 237 129 0 chr13 94354901 94354994 -25929318 + PB1 SINE Alu 13 117 -10 7 1304 429 70 0 0 chr13 94355765 94355822 -25928490 + (CAT)n Simple_repeat Simple_repeat 1 57 0 7 1304 503 234 0 0 chr13 94355822 94355929 -25928383 - B3 SINE B2 -11 205 99 7 1304 848 219 30 25 chr13 94356302 94356429 -25927883 + B3 SINE B2 9 136 -80 7 1304 2712 73 143 138 chr13 94356429 94356938 -25927374 + RLTR1B LTR ERV1 1 512 0 7 1304 848 219 30 25 chr13 94356938 94357011 -25927301 + B3 SINE B2 137 209 -7 7 1304 595 257 52 33 chr13 94357028 94357181 -25927131 + RSINE1 SINE B4 3 158 -7 7 1304 1154 41 21 0 chr13 94357454 94357599 -25926713 + B1_Mus1 SINE Alu 1 148 0 7 1304 491 258 4 16 chr13 94357868 94358120 -25926192 + (CATA)n Simple_repeat Simple_repeat 1 249 0 7 1304 396 274 0 19 chr13 94358142 94358250 -25926062 - RSINE1 SINE B4 -57 108 3 7 1304 640 303 81 22 chr13 94358361 94358634 -25925678 - B4A SINE B4 -2 290 2 7 1304 180 300 20 0 chr13 94358674 94358724 -25925588 - MIRb SINE MIR -1 267 217 7 1304 561 279 115 0 chr13 94358759 94358924 -25925388 - MER58A DNA MER1_type 0 224 41 7 1304 841 147 41 20 chr13 94358924 94359070 -25925242 + B1_Mur4 SINE Alu 2 150 0 7 1304 549 96 0 0 chr13 94359237 94359331 -25924981 + (CACAG)n Simple_repeat Simple_repeat 4 97 0 7 1304 6141 53 0 4 chr13 94359397 94360153 -25924159 + L1_Mm LINE L1 4692 5444 -439 7 1304 340 88 18 0 chr13 94360153 94360210 -25924102 + B2_Mm1t SINE B2 122 179 -14 7 1304 1315 256 163 5 chr13 94360227 94360619 -25923693 - Lx6 LINE L1 -2 7458 7005 7 1304 1754 185 11 24 chr13 94360636 94361007 -25923305 + RLTR28 LTR ERVL 18 383 -141 7 1304 5514 193 38 28 chr13 94361007 94362120 -25922192 - Lx6 LINE L1 -745 6715 5592 7 1304 437 42 27 40 chr13 94362121 94362195 -25922117 - B2_Mm1a SINE B2 -5 188 116 7 1304 216 0 0 0 chr13 94362202 94362226 -25922086 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1304 827 38 0 0 chr13 94362229 94362335 -25921977 - B1_Mus1 SINE Alu -14 134 29 7 1304 1751 198 55 20 chr13 94362573 94362942 -25921370 - MTC LTR MaLR -8 413 27 7 1304 2256 141 57 0 chr13 94362942 94363312 -25921000 + ORR1B1 LTR MaLR 1 391 -3 7 1304 1751 198 55 20 chr13 94363312 94363340 -25920972 - MTC LTR MaLR -395 26 2 7 1304 1481 64 11 0 chr13 94363677 94363864 -25920448 + B2_Mm1t SINE B2 5 193 0 7 1304 906 151 7 0 chr13 94364014 94364160 -25920152 - B1_Mus1 SINE Alu 0 148 2 7 1304 1209 68 0 0 chr13 94364207 94364354 -25919958 + B1_Mus1 SINE Alu 2 148 0 7 1304 324 0 0 0 chr13 94364354 94364390 -25919922 + (A)n Simple_repeat Simple_repeat 1 36 0 7 1304 1743 159 128 9 chr13 94364475 94364662 -25919650 - ORR1C2 LTR MaLR 0 384 189 7 1304 555 16 0 0 chr13 94364662 94364726 -25919586 + (GA)n Simple_repeat Simple_repeat 1 64 0 7 1304 1743 159 128 9 chr13 94364726 94364881 -25919431 - ORR1C2 LTR MaLR -196 188 1 7 1304 911 84 14 0 chr13 94365010 94365152 -25919160 + URR1A DNA MER1_type 82 225 -1 7 1304 762 208 0 20 chr13 94365305 94365452 -25918860 - B1_Mm SINE Alu -1 146 3 7 1304 31 58 0 0 chr13 94365545 94365597 -25918715 + AT_rich Low_complexity Low_complexity 1 52 0 7 1304 408 226 84 34 chr13 94365852 94365971 -25918341 + PB1D10 SINE Alu 1 125 -2 7 1304 1711 26 0 0 chr13 94366128 94366320 -25917992 + B2_Mm1t SINE B2 2 193 0 7 1304 664 263 22 6 chr13 94366405 94366585 -25917727 + B3A SINE B2 1 183 -15 7 1304 276 30 0 0 chr13 94367454 94367487 -25916825 + (TAA)n Simple_repeat Simple_repeat 2 34 0 7 1304 762 191 303 28 chr13 94367711 94368001 -25916311 - ORR1D2 LTR MaLR 0 370 1 7 1304 437 239 51 22 chr13 94368419 94368556 -25915756 + B3 SINE B2 70 210 -6 7 1304 189 0 0 0 chr13 94368564 94368585 -25915727 + (CA)n Simple_repeat Simple_repeat 1 21 0 7 1304 234 105 0 0 chr13 94369681 94369719 -25914593 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 7 1304 1220 14 14 7 chr13 94369720 94369864 -25914448 - B1_Mus1 SINE Alu -1 147 3 7 1304 567 202 9 17 chr13 94369868 94369984 -25914328 - PB1D10 SINE Alu -2 115 1 7 1304 1725 188 69 24 chr13 94370086 94370463 -25913849 + ORR1B1 LTR MaLR 1 394 0 7 1304 294 241 205 92 chr13 94370751 94370828 -25913484 - Arthur1 DNA Tip100 -11 3936 3866 7 1304 1211 34 7 0 chr13 94370828 94370974 -25913338 + B1_Mus2 SINE Alu 1 147 0 7 1304 294 241 205 92 chr13 94370974 94371189 -25913123 - Arthur1 DNA Tip100 -82 3865 3611 7 1304 43 47 0 0 chr13 94371245 94371309 -25913003 + AT_rich Low_complexity Low_complexity 1 64 0 7 1304 1047 92 0 7 chr13 94371408 94371561 -25912751 - BGLII_B LTR ERVK 0 441 290 7 1304 2573 139 47 58 chr13 94371645 94371722 -25912590 - RLTR20A2 LTR ERVK -10 568 492 7 1304 261 0 0 0 chr13 94371722 94371751 -25912561 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 20 2573 139 47 58 chr13 94371751 94372207 -25912105 - RLTR20A2 LTR ERVK -87 491 43 7 1305 324 0 0 0 chr13 94372702 94372738 -25911574 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1305 209 264 42 0 chr13 94373170 94373242 -25911070 - L2a LINE L2 -5 3421 3347 7 1305 251 295 26 18 chr13 94374265 94374379 -25909933 - PB1D10 SINE Alu 0 117 3 7 1305 234 0 0 0 chr13 94374680 94374706 -25909606 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 1305 1551 120 4 9 chr13 94376531 94376758 -25907554 - URR1A DNA MER1_type 0 226 1 7 1305 2225 113 0 12 chr13 94377933 94378263 -25906049 - ORR1A3 LTR MaLR 0 326 1 7 1305 547 322 172 56 chr13 94378725 94379207 -25905105 - FordPrefect DNA Tip100 -101 1582 1075 7 1305 927 223 45 10 chr13 94379207 94379406 -25904906 - B3 SINE B2 -10 206 1 7 1305 547 322 172 56 chr13 94379406 94379669 -25904643 - FordPrefect DNA Tip100 -609 1074 752 7 1305 471 321 191 19 chr13 94379746 94380171 -25904141 - FordPrefect DNA Tip100 -1146 537 40 7 1305 198 0 0 0 chr13 94380929 94380951 -25903361 + (T)n Simple_repeat Simple_repeat 1 22 0 8 1305 247 352 54 42 chr13 94381038 94381278 -25903034 - MamRep434 DNA TcMar 0 426 184 8 1305 207 0 0 0 chr13 94381301 94381324 -25902988 + (TTG)n Simple_repeat Simple_repeat 2 24 0 8 1305 556 143 146 32 chr13 94381369 94381482 -25902830 + B1_Mus1 SINE Alu 11 137 -11 8 1305 228 67 0 0 chr13 94381482 94381512 -25902800 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 8 1305 496 154 16 24 chr13 94381697 94381823 -25902489 + CT-rich Low_complexity Low_complexity 1 125 0 8 1305 271 233 264 11 chr13 94381833 94381924 -25902388 - PB1D10 SINE Alu -1 116 3 8 1305 348 24 0 0 chr13 94382147 94382188 -25902124 + (TC)n Simple_repeat Simple_repeat 1 41 0 8 1305 1165 62 7 0 chr13 94382510 94382656 -25901656 - B1_Mus2 SINE Alu 0 147 1 8 1305 1185 78 0 40 chr13 94383462 94383636 -25900676 + L1Md_F2 LINE L1 6404 6570 -12 8 1305 1213 61 0 0 chr13 94383645 94383793 -25900519 + B1_Mus1 SINE Alu 1 148 0 8 1305 208 300 122 0 chr13 94384290 94384380 -25899932 - MIRc SINE MIR -52 216 116 8 1305 308 191 176 28 chr13 94384485 94384593 -25899719 - Lx8 LINE L1 -69 7404 7281 8 1305 198 0 0 0 chr13 94384593 94384615 -25899697 + (G)n Simple_repeat Simple_repeat 1 22 0 8 1305 235 322 0 0 chr13 94384672 94384731 -25899581 + Lx7 LINE L1 6584 6642 -1054 8 1305 1079 282 22 92 chr13 94384727 94384885 -25899427 + Lx8 LINE L1 6915 7044 -429 8 1305 1329 61 59 32 chr13 94384885 94384911 -25899401 - B2_Mm2 SINE B2 -2 193 173 8 1305 1510 49 27 0 chr13 94384911 94385096 -25899216 + B2_Mm1t SINE B2 2 191 -2 8 1305 1329 61 59 32 chr13 94385096 94385256 -25899056 - B2_Mm2 SINE B2 -23 172 2 8 1305 1938 204 75 0 chr13 94385256 94385642 -25898670 - MTD LTR MaLR -3 416 1 8 1305 1079 282 22 92 chr13 94385642 94385884 -25898428 + Lx8 LINE L1 7045 7287 -186 8 1305 311 169 0 0 chr13 94385898 94385957 -25898355 - B3A SINE B2 -137 61 3 8 1305 30 0 0 0 chr13 94385962 94385992 -25898320 + AT_rich Low_complexity Low_complexity 1 30 0 8 1305 583 225 85 0 chr13 94385993 94386122 -25898190 - B1_Mur1 SINE Alu -2 147 8 8 1305 365 200 0 101 chr13 94386110 94386199 -25898113 + MT2A LTR ERVL 55 134 -399 8 1305 549 135 0 0 chr13 94386258 94386347 -25897965 + (TA)n Simple_repeat Simple_repeat 2 90 0 8 1305 983 110 0 7 chr13 94386469 94386615 -25897697 + B1_Mus2 SINE Alu 1 145 -2 8 1305 1135 89 0 0 chr13 94386665 94386811 -25897501 - B1_Mus2 SINE Alu -1 146 1 8 1305 907 143 14 0 chr13 94387892 94388032 -25896280 + B1_Mur4 SINE Alu 1 142 -8 8 1305 299 85 21 0 chr13 94388150 94388197 -25896115 + (TG)n Simple_repeat Simple_repeat 2 49 0 8 1305 1459 69 32 0 chr13 94388806 94388994 -25895318 - B2_Mm2 SINE B2 -1 194 1 8 1305 492 248 15 15 chr13 94389157 94389292 -25895020 - ID_B1 SINE B4 -2 222 88 8 1305 255 252 69 126 chr13 94389192 94389351 -25894961 - MT2B LTR ERVL -338 263 114 8 1305 192 178 89 0 chr13 94389390 94389435 -25894877 + L2b LINE L2 3244 3292 -83 8 1305 934 151 7 0 chr13 94389643 94389782 -25894530 - B1_Mus1 SINE Alu 0 148 9 8 1305 567 0 0 0 chr13 94390294 94390357 -25893955 + (TA)n Simple_repeat Simple_repeat 2 64 0 8 1305 447 236 76 76 chr13 94390387 94390584 -25893728 + B3A SINE B2 2 198 0 8 1305 1186 61 0 13 chr13 94390602 94390751 -25893561 + B1_Mus2 SINE Alu 1 147 0 8 1305 243 351 0 25 chr13 94390823 94390902 -25893410 + B4A SINE B4 216 292 0 8 1305 256 326 40 20 chr13 94390849 94390949 -25893363 + B3 SINE B2 112 213 -3 8 1305 198 0 0 0 chr13 94391804 94391826 -25892486 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 8 1305 303 67 0 0 chr13 94392007 94392058 -25892254 + B1_Mus2 SINE Alu 70 147 0 8 1305 341 58 0 19 chr13 94392077 94392130 -25892182 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 8 1305 542 255 84 80 chr13 94392645 94392858 -25891454 + B4A SINE B4 2 215 -77 8 1305 487 257 0 0 chr13 94392883 94392988 -25891324 - PB1D7 SINE Alu -4 116 12 8 1305 300 257 250 26 chr13 94392884 94393000 -25891312 - ID_B1 SINE B4 -5 219 78 8 1305 304 379 33 0 chr13 94393223 94393376 -25890936 - MER103 DNA DNA 0 166 9 8 1305 255 372 75 7 chr13 94393514 94393660 -25890652 - L2a LINE L2 -5 3421 3266 8 1305 695 256 79 22 chr13 94394453 94394681 -25889631 + B4A SINE B4 51 291 -1 8 1305 300 53 0 0 chr13 94395729 94395767 -25888545 + (T)n Simple_repeat Simple_repeat 1 38 0 8 1305 1231 48 0 0 chr13 94395767 94395914 -25888398 - B1_Mus2 SINE Alu 0 147 1 8 1305 273 264 258 24 chr13 94396117 94396128 -25888184 - B4A SINE B4 -55 237 90 8 1305 466 224 46 9 chr13 94396128 94396236 -25888076 - PB1D10 SINE Alu 0 117 6 8 1305 354 254 127 0 chr13 94396244 94396354 -25887958 - PB1 SINE Alu -3 124 1 8 1305 249 300 12 12 chr13 94396354 94396435 -25887877 + ID4 SINE ID 2 82 -1 8 1305 210 139 0 0 chr13 94396494 94396530 -25887782 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 8 1305 551 177 10 0 chr13 94396677 94396773 -25887539 + PB1D9 SINE Alu 17 113 -7 8 1305 1242 48 0 0 chr13 94396942 94397088 -25887224 + B1_Mus2 SINE Alu 2 147 0 8 1305 26 0 0 0 chr13 94398184 94398210 -25886102 + AT_rich Low_complexity Low_complexity 1 26 0 8 1305 268 160 120 0 chr13 94398210 94398285 -25886027 - Lx4A LINE L1 0 7058 6975 8 1305 835 237 59 9 chr13 94398325 94398546 -25885766 + ORR1D1 LTR MaLR 1 232 -142 8 1305 597 159 158 9 chr13 94399671 94399785 -25884527 - B1_Mur2 SINE Alu -18 131 1 8 1305 313 261 132 96 chr13 94399796 94399821 -25884491 + CYRA11_Mm Unknown Y-chromosome 154 381 -236 8 1305 973 166 128 10 chr13 94399821 94400016 -25884296 - URR1B DNA MER1_type -2 223 6 8 1305 1654 37 0 0 chr13 94400023 94400211 -25884101 + B2_Mm1a SINE B2 1 188 -5 8 1305 246 42 62 0 chr13 94400224 94400272 -25884040 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 8 1305 358 254 0 0 chr13 94400334 94400405 -25883907 + ID4_ SINE ID 2 72 -11 8 1305 274 213 91 26 chr13 94400857 94400934 -25883378 - ID4_ SINE ID 0 83 2 8 1305 1266 96 17 11 chr13 94401515 94401695 -25882617 + B2_Mm2 SINE B2 1 181 -14 8 1305 978 102 22 8 chr13 94401750 94401896 -25882416 + B1_Mm SINE Alu 15 141 -6 8 1305 759 22 0 0 chr13 94401908 94401997 -25882315 + (GAGAA)n Simple_repeat Simple_repeat 2 90 0 8 1305 835 242 163 20 chr13 94402106 94402118 -25882194 - B4A SINE B4 -12 280 269 8 1305 183 129 0 0 chr13 94402118 94402149 -25882163 + (CGTG)n Simple_repeat Simple_repeat 4 34 0 8 1305 835 242 163 20 chr13 94402149 94402381 -25881931 - B4A SINE B4 -24 268 2 8 1305 251 356 145 16 chr13 94402584 94403026 -25881286 - L2 LINE L2 -2253 1166 668 8 1305 415 243 163 7 chr13 94403449 94403602 -25880710 + RMER5 LTR ERV1 33 209 -325 8 1305 404 195 239 0 chr13 94403662 94403775 -25880537 + RMER5 LTR ERV1 394 533 -1 8 1305 234 311 0 0 chr13 94404184 94404258 -25880054 - ID4_ SINE ID 0 83 10 8 1305 221 314 86 0 chr13 94404716 94404821 -25879491 - MIR3 SINE MIR -7 201 88 8 1305 280 207 12 24 chr13 94405314 94405398 -25878914 + (TA)n Simple_repeat Simple_repeat 2 84 0 8 1305 23 0 0 0 chr13 94405893 94405916 -25878396 + AT_rich Low_complexity Low_complexity 1 23 0 8 1305 252 135 0 11 chr13 94405916 94405964 -25878348 - B1_Mur4 SINE Alu 0 150 105 8 1305 207 0 0 0 chr13 94405964 94405987 -25878325 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8 1305 1121 73 0 0 chr13 94405987 94406124 -25878188 - B1_Mus2 SINE Alu -9 138 2 8 1305 251 210 0 75 chr13 94406124 94406141 -25878171 - B1_Mur3 SINE Alu -45 104 89 8 1305 401 233 19 0 chr13 94406252 94406355 -25877957 - PB1D10 SINE Alu -8 109 5 8 1305 194 0 39 0 chr13 94406441 94406467 -25877845 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 1305 924 178 166 6 chr13 94408885 94409066 -25875246 + B3 SINE B2 2 211 -5 8 1305 354 246 54 25 chr13 94409221 94409373 -25874939 - B3 SINE B2 -32 163 2 8 1305 288 268 11 68 chr13 94410251 94410339 -25873973 + ID4 SINE ID 1 83 0 8 1305 291 122 0 0 chr13 94410684 94410733 -25873579 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 1305 537 99 0 0 chr13 94410780 94410861 -25873451 + (TC)n Simple_repeat Simple_repeat 1 81 0 8 1305 285 241 69 0 chr13 94410889 94410947 -25873365 - PB1 SINE Alu -22 105 44 8 1305 229 259 0 0 chr13 94411139 94411193 -25873119 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1305 279 239 0 33 chr13 94411256 94411347 -25872965 + (TG)n Simple_repeat Simple_repeat 2 89 0 8 1305 1180 74 0 0 chr13 94411429 94411577 -25872735 + B1_Mus1 SINE Alu 1 148 0 8 1305 195 42 0 0 chr13 94411577 94411601 -25872711 + (A)n Simple_repeat Simple_repeat 1 24 0 8 1305 562 215 15 76 chr13 94412121 94412252 -25872060 - B1_Mur3 SINE Alu -25 124 2 8 1305 228 135 0 0 chr13 94412256 94412293 -25872019 + (TA)n Simple_repeat Simple_repeat 1 37 0 8 1305 1074 96 14 0 chr13 94412302 94412448 -25871864 - B1_Mur4 SINE Alu -1 149 2 8 1305 291 28 0 0 chr13 94412520 94412556 -25871756 + (TC)n Simple_repeat Simple_repeat 2 37 0 8 1305 209 136 0 64 chr13 94413937 94413984 -25870328 + MIRc SINE MIR 110 153 -115 8 1305 188 35 35 0 chr13 94414163 94414192 -25870120 + (CAAAAA)n Simple_repeat Simple_repeat 6 35 0 8 1305 298 302 40 30 chr13 94414325 94414424 -25869888 - PB1D7 SINE Alu -9 111 12 8 1305 384 237 129 0 chr13 94414452 94414545 -25869767 - ID_B1 SINE B4 -11 213 109 8 1305 269 274 60 121 chr13 94414545 94414568 -25869744 - PB1D9 SINE Alu -11 109 1 8 1305 243 254 28 14 chr13 94414899 94414971 -25869341 + MLT1N2 LTR MaLR 487 559 -3 9 1305 208 214 36 0 chr13 94415030 94415086 -25869226 + (CAAA)n Simple_repeat Simple_repeat 2 59 0 9 1305 1336 105 11 5 chr13 94415310 94415501 -25868811 - B2_Mm1t SINE B2 0 193 2 9 1305 502 130 17 0 chr13 94415740 94415839 -25868473 + (TC)n Simple_repeat Simple_repeat 1 101 0 9 1305 1153 75 0 0 chr13 94415839 94415985 -25868327 - B1_Mm SINE Alu -1 146 1 9 1305 502 130 17 0 chr13 94415985 94416000 -25868312 + (TC)n Simple_repeat Simple_repeat 2 16 0 9 1305 995 71 0 16 chr13 94416189 94416318 -25867994 + B1_Mus1 SINE Alu 3 129 -19 9 1305 6500 60 5 29 chr13 94416318 94417160 -25867152 + RLTR13B2 LTR ERVK 1 822 0 9 1305 216 97 0 0 chr13 94417182 94417213 -25867099 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 9 1305 684 134 7 15 chr13 94417304 94417440 -25866872 + GA-rich Low_complexity Low_complexity 2 136 0 9 1305 238 204 0 69 chr13 94417558 94417616 -25866696 + B4A SINE B4 239 292 0 9 1305 195 69 0 0 chr13 94417754 94417783 -25866529 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 9 1305 9858 32 1 2 chr13 94419492 94421326 -25862986 - L1Md_F2 LINE L1 0 6582 4752 9 1305 389 118 0 29 chr13 94421340 94421410 -25862902 + (TCC)n Simple_repeat Simple_repeat 3 70 0 9 1305 226 261 122 64 chr13 94421412 94421423 -25862889 + RLTR22_Mus LTR ERVK 689 699 -1109 9 1305 1124 75 7 14 chr13 94421423 94421571 -25862741 - B1_Mus1 SINE Alu 0 148 2 9 1305 226 261 122 64 chr13 94421571 94421731 -25862581 + RLTR22_Mus LTR ERVK 700 869 -939 9 1305 23 33 0 0 chr13 94421861 94421891 -25862421 + AT_rich Low_complexity Low_complexity 1 30 0 9 1305 684 264 14 59 chr13 94421891 94422112 -25862200 - B3 SINE B2 -1 215 5 9 1305 23 33 0 0 chr13 94422419 94422449 -25861863 + AT_rich Low_complexity Low_complexity 1 30 0 9 1305 1277 90 20 36 chr13 94422726 94422922 -25861390 - B2_Mm2 SINE B2 -1 194 2 9 1305 1218 61 0 0 chr13 94423066 94423213 -25861099 + B1_Mm SINE Alu 1 147 0 9 1305 198 103 0 0 chr13 94423213 94423242 -25861070 + (A)n Simple_repeat Simple_repeat 1 29 0 9 1305 360 339 0 0 chr13 94423252 94423361 -25860951 + PB1D10 SINE Alu 1 109 -8 9 1305 414 0 0 0 chr13 94424254 94424300 -25860012 + (CA)n Simple_repeat Simple_repeat 2 47 0 9 1305 1221 55 0 0 chr13 94424360 94424505 -25859807 - B1_Mm SINE Alu 0 147 3 9 1305 779 256 62 33 chr13 94424518 94424728 -25859584 - B3 SINE B2 0 216 1 9 1305 184 386 68 7 chr13 94424730 94424876 -25859436 + L3 LINE CR1 4152 4306 -183 9 1305 1297 65 24 0 chr13 94424883 94425053 -25859259 + B2_Mm2 SINE B2 2 175 -20 9 1305 2302 62 152 12 chr13 94425284 94425626 -25858686 + RLTR10 LTR ERVK 1 390 0 9 1305 3605 21 94 2 chr13 94425630 94426065 -25858247 - IAPLTR2_Mm LTR ERVK 0 475 1 9 1305 276 318 0 0 chr13 94426649 94426734 -25857578 + MARNA DNA Mariner 265 349 -237 9 1305 497 16 16 0 chr13 94427148 94427210 -25857102 + (TC)n Simple_repeat Simple_repeat 2 64 0 9 1305 426 39 0 0 chr13 94427226 94427278 -25857034 + (GGAA)n Simple_repeat Simple_repeat 2 53 0 9 1305 212 204 0 22 chr13 94427361 94427406 -25856906 + (TATATG)n Simple_repeat Simple_repeat 1 44 0 9 1305 494 288 213 28 chr13 94427412 94427623 -25856689 - B4A SINE B4 0 292 43 9 1305 360 0 0 0 chr13 94427625 94427665 -25856647 + (T)n Simple_repeat Simple_repeat 1 40 0 9 1305 1288 21 0 0 chr13 94427667 94427812 -25856500 - B1_Mus2 SINE Alu -2 145 1 9 1305 1522 216 82 65 chr13 94427916 94428583 -25855729 + RMER17B LTR ERVK 1 674 -284 9 1305 444 19 0 0 chr13 94428583 94428636 -25855676 + (CA)n Simple_repeat Simple_repeat 1 53 0 9 1305 1522 266 73 126 chr13 94428636 94429004 -25855308 + RMER17B LTR ERVK 583 949 -9 9 1305 442 304 66 35 chr13 94429034 94429320 -25854992 + RLTR15 LTR ERVK 49 343 -16 9 1305 203 184 0 0 chr13 94429409 94429447 -25854865 + (TTA)n Simple_repeat Simple_repeat 3 40 0 9 1305 786 243 39 130 chr13 94430593 94430900 -25853412 + B4 SINE B4 1 279 -13 9 1305 432 0 0 0 chr13 94430912 94430960 -25853352 + (CA)n Simple_repeat Simple_repeat 2 49 0 9 1305 203 250 16 16 chr13 94431001 94431062 -25853250 + (TA)n Simple_repeat Simple_repeat 1 61 0 9 1305 289 117 16 16 chr13 94431128 94431189 -25853123 + (TA)n Simple_repeat Simple_repeat 1 61 0 9 1305 369 259 6 95 chr13 94431203 94431361 -25852951 + L1MA6 LINE L1 6125 6268 -32 9 1305 634 276 64 116 chr13 94431367 94431499 -25852813 + MLT1A0 LTR MaLR 17 129 -236 9 1305 1261 105 0 50 chr13 94431499 94431700 -25852612 - B2_Mm2 SINE B2 -2 193 3 9 1305 634 276 64 116 chr13 94431700 94431878 -25852434 + MLT1A0 LTR MaLR 130 311 -54 9 1305 636 238 0 20 chr13 94431876 94432026 -25852286 - B1_Mur1 SINE Alu -2 147 1 9 1305 290 182 0 175 chr13 94431919 94432039 -25852273 - MT2B LTR ERVL -343 258 160 9 1305 240 288 0 0 chr13 94432043 94432102 -25852210 + MLT1A0 LTR MaLR 304 362 -3 9 1305 587 213 31 0 chr13 94432523 94432650 -25851662 + MTEa LTR MaLR 1 131 -228 9 1305 600 272 29 29 chr13 94432672 94432846 -25851466 + MTEa LTR MaLR 201 374 -5 9 1305 217 272 81 69 chr13 94433359 94433446 -25850866 + PB1D10 SINE Alu 1 88 -29 9 1305 23 0 0 0 chr13 94434065 94434088 -25850224 + AT_rich Low_complexity Low_complexity 1 23 0 9 1305 5103 34 0 0 chr13 94434468 94435055 -25849257 + L1Md_T LINE L1 5996 6582 0 9 1305 822 171 7 7 chr13 94435123 94435270 -25849042 - B1_Mus2 SINE Alu 0 147 1 9 1305 288 254 14 14 chr13 94435600 94435672 -25848640 + ORR1E LTR MaLR 1 72 -287 9 1305 392 304 31 125 chr13 94435768 94436057 -25848255 + ORR1E LTR MaLR 97 358 -1 9 1305 306 67 0 0 chr13 94436852 94436897 -25847415 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1305 1083 262 26 22 chr13 94436907 94437180 -25847132 - B4A SINE B4 -18 274 1 9 1305 219 69 0 0 chr13 94437260 94437289 -25847023 + (TCC)n Simple_repeat Simple_repeat 3 31 0 9 1305 1061 237 10 0 chr13 94437300 94437498 -25846814 - B3 SINE B2 -16 200 1 9 1305 2297 136 114 44 chr13 94437955 94438409 -25845903 + RMER16 LTR ERVK 48 533 0 9 1305 2683 143 127 18 chr13 94438616 94439129 -25845183 - RMER4B LTR ERVK 0 585 17 9 1305 230 247 0 144 chr13 94439693 94439783 -25844529 + ZP3AR Satellite Satellite 10 86 -126 9 1305 876 217 99 47 chr13 94439738 94439881 -25844431 + ID_B1 SINE B4 1 164 -60 9 1305 2846 64 0 0 chr13 94439881 94440227 -25844085 + ORR1A1 LTR MaLR 1 346 0 9 1305 876 217 99 47 chr13 94440227 94440296 -25844016 + ID_B1 SINE B4 165 224 0 9 1305 312 314 36 11 chr13 94440557 94440704 -25843608 - MIRb SINE MIR -96 180 31 9 1305 238 170 43 0 chr13 94441157 94441204 -25843108 + (CAGAGA)n Simple_repeat Simple_repeat 2 50 0 9 1305 688 221 84 0 chr13 94442674 94442805 -25841507 - B1_Mur1 SINE Alu -1 148 7 9 1305 620 178 62 0 chr13 94442828 94442957 -25841355 + B1_Mur2 SINE Alu 3 139 -10 9 1305 470 358 11 95 chr13 94443002 94443181 -25841131 + RSINE1 SINE B4 2 165 0 9 1305 32 43 0 0 chr13 94443199 94443245 -25841067 + AT_rich Low_complexity Low_complexity 1 46 0 9 1305 253 254 0 65 chr13 94443926 94444003 -25840309 + MIRc SINE MIR 84 154 -122 9 1305 214 235 0 0 chr13 94444310 94444361 -25839951 + C-rich Low_complexity Low_complexity 2 52 0 9 1305 365 300 24 30 chr13 94444710 94444875 -25839437 - L1MC4a LINE L1 -2001 5881 5718 9 1305 1239 41 0 0 chr13 94445722 94445868 -25838444 - B1_Mm SINE Alu 0 147 2 9 1305 336 228 25 66 chr13 94445899 94446021 -25838291 + PB1D10 SINE Alu 1 117 0 9 1305 698 185 37 7 chr13 94446295 94446431 -25837881 + B1_Mus1 SINE Alu 7 146 -2 9 1305 449 295 30 8 chr13 94446589 94446722 -25837590 - B4 SINE B4 -125 167 32 9 1305 206 163 0 23 chr13 94447366 94447410 -25836902 + T-rich Low_complexity Low_complexity 3 45 0 9 1305 2297 134 45 23 chr13 94448175 94448572 -25835740 - MTC LTR MaLR -8 413 8 9 1305 2181 131 67 0 chr13 94448637 94448980 -25835332 - ORR1B2 LTR MaLR 0 367 2 9 1305 270 179 148 45 chr13 94450076 94450164 -25834148 + Charlie7 DNA MER1_type 43 139 -2473 9 1305 452 287 90 95 chr13 94450380 94450524 -25833788 + Charlie7 DNA MER1_type 1576 1720 -892 9 1305 1319 72 50 6 chr13 94450524 94450705 -25833607 + B2_Mm2 SINE B2 1 189 -6 9 1305 452 287 90 95 chr13 94450705 94450845 -25833467 + Charlie7 DNA MER1_type 1721 1849 -763 9 1305 791 183 204 6 chr13 94450845 94451021 -25833291 + B3 SINE B2 1 211 -5 9 1305 452 287 90 95 chr13 94451021 94451092 -25833220 + Charlie7 DNA MER1_type 1850 1907 -705 9 1305 203 0 0 36 chr13 94451092 94451120 -25833192 + (TGGGGG)n Simple_repeat Simple_repeat 6 32 0 9 1305 452 287 90 95 chr13 94451120 94451309 -25833003 + Charlie7 DNA MER1_type 1908 2119 -493 9 1305 844 293 91 16 chr13 94451449 94451758 -25832554 + MTEa LTR MaLR 6 337 -42 9 1305 1640 37 11 0 chr13 94451758 94451948 -25832364 - B2_Mm1a SINE B2 0 193 2 9 1305 1293 14 0 0 chr13 94451964 94452110 -25832202 - B1_Mus2 SINE Alu 0 147 2 9 1305 819 141 8 0 chr13 94452205 94452333 -25831979 + B1_Mus1 SINE Alu 11 139 -9 9 1305 279 0 0 0 chr13 94452333 94452364 -25831948 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 9 1305 207 188 0 0 chr13 94452419 94452467 -25831845 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 9 1305 348 161 0 0 chr13 94453115 94453171 -25831141 - ID_B1 SINE B4 -3 221 166 9 1305 253 140 17 17 chr13 94453171 94453229 -25831083 + (TA)n Simple_repeat Simple_repeat 1 58 0 9 1305 385 236 34 0 chr13 94453229 94453318 -25830994 - ID_B1 SINE B4 -53 171 80 9 1305 2236 140 55 70 chr13 94453333 94453733 -25830579 + ORR1B1 LTR MaLR 1 394 0 9 1305 963 50 21 14 chr13 94453750 94453892 -25830420 + (TCTCCC)n Simple_repeat Simple_repeat 2 144 0 9 1305 1948 167 50 53 chr13 94454606 94454985 -25829327 + ORR1C1 LTR MaLR 1 378 0 9 1305 587 39 13 0 chr13 94455163 94455241 -25829071 + (CA)n Simple_repeat Simple_repeat 1 79 0 9 1305 245 333 12 0 chr13 94455538 94455619 -25828693 - L4 LINE RTE -1086 943 862 9 1305 30 59 0 0 chr13 94456277 94456328 -25827984 + AT_rich Low_complexity Low_complexity 1 51 0 9 1305 423 337 6 63 chr13 94456328 94456502 -25827810 - RSINE1 SINE B4 0 165 2 9 1305 213 65 0 0 chr13 94456537 94456568 -25827744 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1305 1183 61 0 0 chr13 94457835 94457982 -25826330 + B1_Mus1 SINE Alu 2 148 0 1 1305 198 0 0 0 chr13 94457982 94458004 -25826308 + (CAAAAA)n Simple_repeat Simple_repeat 6 27 0 1 1305 1032 279 122 18 chr13 94459826 94460260 -25824052 + L1M4 LINE L1 3469 3947 -2199 1 1305 364 246 75 55 chr13 94460519 94460665 -25823647 - B1F SINE Alu 0 149 1 1 1305 499 336 92 61 chr13 94460730 94460814 -25823498 - MLT1J LTR MaLR 0 512 419 1 1305 2154 141 158 0 chr13 94460814 94461176 -25823136 + MTC LTR MaLR 1 419 -2 1 1305 499 336 92 61 chr13 94461176 94461503 -25822809 - MLT1J LTR MaLR -94 418 88 1 1305 245 224 17 17 chr13 94461641 94461700 -25822612 - ID4_ SINE ID -11 72 14 1 1305 356 294 0 87 chr13 94462222 94462360 -25821952 + ID_B1 SINE B4 88 213 -11 1 1305 223 28 56 0 chr13 94462360 94462396 -25821916 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1 1305 1097 163 69 0 chr13 94462856 94463058 -25821254 - B3 SINE B2 0 216 1 1 1305 2590 59 16 0 chr13 94463118 94463440 -25820872 - ORR1A2 LTR MaLR 0 327 1 1 1305 180 111 0 0 chr13 94463518 94463545 -25820767 + (TTA)n Simple_repeat Simple_repeat 3 29 0 1 1305 19979 73 17 12 chr13 94463585 94467102 -25817210 - L1VL4 LINE L1 0 3559 20 1 1305 26 50 0 0 chr13 94467357 94467397 -25816915 + AT_rich Low_complexity Low_complexity 1 40 0 1 1305 388 317 48 48 chr13 94467407 94467553 -25816759 - RSINE1 SINE B4 -18 147 2 1 1305 1056 116 0 0 chr13 94467693 94467839 -25816473 + B1_Mus2 SINE Alu 2 147 0 1 1305 200 312 60 40 chr13 94469244 94469344 -25814968 + MIR SINE MIR 113 214 -48 1 1305 1255 215 214 3 chr13 94469710 94470055 -25814257 - MTD LTR MaLR 0 419 2 1 1305 198 209 0 0 chr13 94470452 94470495 -25813817 + CT-rich Low_complexity Low_complexity 3 45 0 1 1305 246 359 0 11 chr13 94470496 94470589 -25813723 + C-rich Low_complexity Low_complexity 3 94 0 1 1305 252 0 0 0 chr13 94470591 94470619 -25813693 + (TG)n Simple_repeat Simple_repeat 2 29 0 1 1305 348 24 0 0 chr13 94471184 94471225 -25813087 + (TGG)n Simple_repeat Simple_repeat 1 41 0 1 1305 224 236 0 0 chr13 94471240 94471295 -25813017 - ID4 SINE ID -27 56 2 1 1305 533 252 28 14 chr13 94472646 94472787 -25811525 + ID_B1 SINE B4 82 224 0 1 1305 258 268 98 0 chr13 94473574 94473656 -25810656 + BC1_Mm scRNA scRNA 1 90 -62 1 1305 712 258 47 66 chr13 94474618 94474830 -25809482 - B4 SINE B4 -1 291 84 1 1305 796 144 23 6 chr13 94474830 94475004 -25809308 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 1 1305 237 130 21 42 chr13 94475005 94475053 -25809259 + (TCCA)n Simple_repeat Simple_repeat 1 47 0 1 1305 872 126 23 0 chr13 94475053 94475227 -25809085 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 1 1305 311 266 0 12 chr13 94475234 94475314 -25808998 - B4 SINE B4 -212 80 2 1 1305 306 73 0 0 chr13 94476249 94476290 -25808022 + (ACTG)n Simple_repeat Simple_repeat 4 44 0 1 1305 714 256 0 30 chr13 94476294 94476463 -25807849 - RSINE1 SINE B4 0 165 2 1 1305 674 235 139 6 chr13 94477853 94478033 -25806279 + ID_B1 SINE B4 3 206 -18 1 1305 1235 259 10 14 chr13 94479894 94480184 -25804128 + B4 SINE B4 2 290 -2 1 1305 426 318 7 7 chr13 94480733 94480882 -25803430 + (CA)n Simple_repeat Simple_repeat 1 149 0 1 1305 234 0 0 0 chr13 94481646 94481672 -25802640 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1305 317 327 80 0 chr13 94481701 94481814 -25802498 - RSINE1 SINE B4 -43 122 1 1 1305 841 257 43 119 chr13 94482218 94482638 -25801674 - MTD LTR MaLR -14 405 18 1 1305 886 204 131 0 chr13 94482651 94482842 -25801470 + B3 SINE B2 1 216 0 1 1305 678 249 55 21 chr13 94482875 94483073 -25801239 - B3A SINE B2 -12 183 1 1 1305 964 92 56 0 chr13 94483149 94483291 -25801021 + B2_Mm2 SINE B2 3 152 -43 1 1305 303 28 0 0 chr13 94483291 94483327 -25800985 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1305 1221 61 0 0 chr13 94483395 94483542 -25800770 - B1_Mm SINE Alu 0 147 1 1 1305 1428 62 6 11 chr13 94483561 94483740 -25800572 - B2_Mm1t SINE B2 -14 179 2 1 1305 537 241 94 28 chr13 94483828 94484041 -25800271 + B4A SINE B4 2 228 -64 1 1305 1909 113 9 62 chr13 94484051 94484390 -25799922 - ORR1A4 LTR MaLR -8 321 1 1 1305 190 262 112 37 chr13 94484512 94484619 -25799693 - MIR SINE MIR -113 149 35 1 1305 822 124 0 0 chr13 94485732 94485885 -25798427 + (CA)n Simple_repeat Simple_repeat 1 153 0 1 1305 182 221 8 47 chr13 94485964 94486092 -25798220 + (CA)n Simple_repeat Simple_repeat 1 123 0 1 1305 395 179 0 9 chr13 94486152 94486259 -25798053 + (CA)n Simple_repeat Simple_repeat 1 106 0 1 1305 305 206 10 0 chr13 94486308 94486410 -25797902 + (CA)n Simple_repeat Simple_repeat 1 103 0 1 1305 884 149 76 107 chr13 94486682 94486907 -25797405 - URR1B DNA MER1_type -7 218 1 1 1305 367 243 117 0 chr13 94487091 94487194 -25797118 - PB1D10 SINE Alu 0 117 3 1 1305 1131 238 37 37 chr13 94488157 94488480 -25795832 - MTE2a LTR MaLR 0 379 57 1 1305 502 237 137 50 chr13 94489842 94490024 -25794288 + B3A SINE B2 1 198 0 1 1305 318 256 51 65 chr13 94490367 94490505 -25793807 + B1_Mur1 SINE Alu 2 137 -12 1 1305 948 145 189 32 chr13 94490824 94491009 -25793303 + B3 SINE B2 1 214 -2 1 1305 538 250 20 27 chr13 94491394 94491542 -25792770 + MER5A DNA MER1_type 17 163 -26 1 1305 453 36 0 0 chr13 94493318 94493373 -25790939 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1305 260 222 24 12 chr13 94493548 94493630 -25790682 + (CA)n Simple_repeat Simple_repeat 2 84 0 1 1305 510 319 6 6 chr13 94493761 94493941 -25790371 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1305 302 289 0 16 chr13 94493989 94494172 -25790140 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1305 485 237 215 0 chr13 94494930 94495107 -25789205 - ID_B1 SINE B4 -7 217 3 1 1305 353 302 7 28 chr13 94495371 94495514 -25788798 + B1F1 SINE Alu 2 141 -8 1 1305 264 203 62 0 chr13 94495528 94495592 -25788720 + B1F SINE Alu 41 108 -41 1 1305 223 196 18 18 chr13 94495592 94495649 -25788663 + B4A SINE B4 27 83 -209 1 1305 304 263 51 31 chr13 94495691 94495729 -25788583 + B4A SINE B4 190 230 -62 1 1305 2191 138 92 42 chr13 94495729 94496130 -25788182 - MTC LTR MaLR 0 421 1 1 1305 304 263 51 31 chr13 94496130 94496189 -25788123 + B4A SINE B4 231 289 -3 1 1305 839 146 32 17 chr13 94496238 94496832 -25787480 + GA-rich Low_complexity Low_complexity 1 603 0 1 1305 262 224 0 0 chr13 94496875 94496924 -25787388 - PB1D10 SINE Alu -17 100 52 1 1305 207 0 0 0 chr13 94497427 94497450 -25786862 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1305 195 67 43 43 chr13 94497753 94497800 -25786512 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 1 1305 390 154 0 0 chr13 94497825 94497890 -25786422 - MTC LTR MaLR -192 229 165 1 1305 536 288 8 23 chr13 94497887 94498015 -25786297 - RSINE1 SINE B4 -38 127 2 1 1305 210 281 18 0 chr13 94498326 94498383 -25785929 - ID4_ SINE ID -14 69 12 1 1305 217 62 0 0 chr13 94498401 94498433 -25785879 - B1_Mus2 SINE Alu -114 33 2 1 1305 336 188 0 0 chr13 94498433 94498480 -25785832 + B1_Mus2 SINE Alu 36 82 -65 1 1305 343 294 147 52 chr13 94498480 94498731 -25785581 - B4A SINE B4 -17 275 1 1 1305 251 247 30 20 chr13 94498746 94498845 -25785467 + (TA)n Simple_repeat Simple_repeat 1 100 0 1 1305 1290 14 0 0 chr13 94498857 94499005 -25785307 + (CATATA)n Simple_repeat Simple_repeat 5 152 0 1 1305 592 274 0 20 chr13 94499009 94499158 -25785154 - B3 SINE B2 -56 160 15 1 1305 240 171 71 163 chr13 94499851 94499949 -25784363 - L1ME1 LINE L1 -179 6000 5912 1 1305 353 280 75 15 chr13 94500000 94500134 -25784178 - MTE2a LTR MaLR -46 333 192 1 1305 406 266 46 23 chr13 94500308 94500439 -25783873 - ID_B1 SINE B4 -7 217 84 2 1305 342 305 0 9 chr13 94500440 94500546 -25783766 - L1M5 LINE L1 -745 5699 5595 3 1305 659 223 14 130 chr13 94500592 94500808 -25783504 - MTE2a LTR MaLR -188 191 1 1 1305 507 261 53 16 chr13 94501207 94501400 -25782912 - L1ME1 LINE L1 -715 5867 5663 4 1305 1260 27 0 0 chr13 94501421 94501568 -25782744 + B1_Mus2 SINE Alu 1 147 0 5 1305 270 292 18 54 chr13 94501587 94501699 -25782613 - PB1D10 SINE Alu -8 109 2 6 1305 394 250 9 9 chr13 94501699 94501804 -25782508 - L1ME1 LINE L1 -465 5699 5595 4 1305 363 136 0 0 chr13 94501830 94501889 -25782423 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 1305 751 202 140 34 chr13 94501890 94502069 -25782243 - B3 SINE B2 -12 204 7 8 1305 629 256 81 36 chr13 94502106 94502414 -25781898 - L1ME1 LINE L1 -589 5575 5254 4 1305 1144 74 0 0 chr13 94502470 94502618 -25781694 - B1_Mus1 SINE Alu 0 148 1 9 163 482 223 8 62 chr13 94502794 94502923 -25781389 - RSINE1 SINE B4 -28 137 16 1 1306 196 53 53 0 chr13 94503020 94503058 -25781254 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 1 1306 335 79 0 4 chr13 94503058 94503112 -25781200 - B1_Mm SINE Alu -8 141 89 1 1306 591 274 166 22 chr13 94503191 94503670 -25780642 - L1ME1 LINE L1 -1130 5016 4453 4 1306 886 300 28 8 chr13 94503671 94503920 -25780392 + B4A SINE B4 35 288 -4 1 1306 350 337 11 17 chr13 94503941 94504119 -25780193 + (CA)n Simple_repeat Simple_repeat 1 177 0 1 1306 336 241 0 0 chr13 94504157 94504279 -25780033 + (CA)n Simple_repeat Simple_repeat 1 122 0 1 1306 595 331 92 36 chr13 94504302 94504826 -25779486 - L1MD LINE L1 -1840 4306 3754 1 1306 200 111 0 22 chr13 94505053 94505099 -25779213 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 1 1306 515 193 121 43 chr13 94507727 94507868 -25776444 + B3A SINE B2 22 173 -25 1 1306 297 0 0 0 chr13 94508162 94508195 -25776117 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1 1306 1548 205 30 24 chr13 94508490 94508860 -25775452 - Lx6 LINE L1 -1319 6141 5770 1 1306 718 136 4 2 chr13 94508856 94508973 -25775339 + Lx5 LINE L1 5645 5771 -391 2 1306 2066 105 106 14 chr13 94509255 94509612 -25774700 - RMER10B LTR ERVL -5 393 4 2 1306 960 136 0 13 chr13 94509954 94510103 -25774209 - B1_Mur2 SINE Alu 0 149 3 2 1306 1330 77 38 22 chr13 94510492 94510677 -25773635 - B2_Mm2 SINE B2 -6 189 2 2 1306 198 0 0 0 chr13 94510794 94510816 -25773496 + (TA)n Simple_repeat Simple_repeat 2 23 0 2 1306 2138 217 18 14 chr13 94510998 94511489 -25772823 + RLTR16 LTR ERVK 1 493 -12 2 1306 1208 62 0 0 chr13 94511539 94511685 -25772627 - B1_Mus2 SINE Alu 0 147 2 2 1306 611 273 7 7 chr13 94511752 94511896 -25772416 + RSINE1 SINE B4 3 146 -19 2 1306 723 251 62 5 chr13 94511967 94512159 -25772153 - MTE2b LTR MaLR -159 220 18 2 1306 311 184 70 0 chr13 94512303 94512417 -25771895 + (TA)n Simple_repeat Simple_repeat 2 123 0 2 1306 622 238 0 0 chr13 94512447 94512573 -25771739 - RSINE1 SINE B4 -38 127 2 3 1306 198 0 0 0 chr13 94512627 94512649 -25771663 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 3 1306 228 86 0 0 chr13 94514843 94514878 -25769434 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1306 1571 116 28 0 chr13 94514896 94515146 -25769166 - L1_Mus3 LINE L1 -2 6636 6380 3 1306 5668 40 1 0 chr13 94515148 94515815 -25768497 + L1_Mus2 LINE L1 5670 6337 -229 3 1306 201 39 0 0 chr13 94516595 94516621 -25767691 + (C)n Simple_repeat Simple_repeat 1 26 0 3 1306 1001 225 28 14 chr13 94516745 94516957 -25767355 - B3 SINE B2 0 216 2 3 1306 4288 119 31 20 chr13 94517026 94517049 -25767263 - Lx LINE L1 0 6654 6628 3 1306 1140 82 0 0 chr13 94517049 94517195 -25767117 - B1_Mus2 SINE Alu -1 146 1 3 1306 4288 119 31 20 chr13 94517195 94517871 -25766441 - Lx LINE L1 -27 6627 5947 3 1306 343 310 30 10 chr13 94517898 94517999 -25766313 + B1F SINE Alu 25 127 -22 3 1306 850 217 37 33 chr13 94518024 94518238 -25766074 - ID_B1 SINE B4 -8 216 2 4 1306 845 81 0 8 chr13 94518527 94518651 -25765661 + (AGGGGG)n Simple_repeat Simple_repeat 6 128 0 4 1306 251 156 22 0 chr13 94518674 94518719 -25765593 - PB1D9 SINE Alu -67 53 8 4 1306 1355 57 6 17 chr13 94518889 94519069 -25765243 - B2_Mm2 SINE B2 -17 178 1 4 1306 192 351 96 6 chr13 94519111 94519277 -25765035 - L2a LINE L2 -4 3422 3242 4 1306 491 236 157 16 chr13 94520501 94520686 -25763626 - B3 SINE B2 -3 213 3 4 1306 950 261 132 5 chr13 94521242 94521653 -25762659 + L1MA4 LINE L1 5483 5932 -368 4 1306 1130 112 6 0 chr13 94521665 94521834 -25762478 + B2_Mm1t SINE B2 2 171 -22 4 1306 246 144 0 3 chr13 94521852 94521901 -25762411 + B2_Mm2 SINE B2 58 105 -111 4 1306 307 306 0 48 chr13 94523793 94523807 -25760505 + ID SINE ID 70 78 -146 4 1306 459 305 0 0 chr13 94523807 94523912 -25760400 + PB1D7 SINE Alu 1 105 -15 5 1306 6144 130 61 12 chr13 94523933 94524946 -25759366 + Lx2 LINE L1 5935 6997 0 5 1306 204 167 55 18 chr13 94524952 94525007 -25759305 + (CAAAC)n Simple_repeat Simple_repeat 5 61 0 5 1306 508 255 45 70 chr13 94525143 94525299 -25759013 - RLTR33 LTR ERVK -80 598 447 5 1306 265 234 16 0 chr13 94525464 94525528 -25758784 - RLTR19C LTR ERVK -409 97 33 5 1306 287 284 26 44 chr13 94525743 94525857 -25758455 + MLT1M LTR MaLR 237 348 -324 5 1306 372 303 0 9 chr13 94525997 94526107 -25758205 + PB1D10 SINE Alu 1 109 -8 5 1306 370 277 0 65 chr13 94526329 94526437 -25757875 + RSINE1 SINE B4 3 103 -62 5 1306 263 115 82 0 chr13 94526577 94526638 -25757674 + PB1D10 SINE Alu 34 99 -18 5 1306 863 169 91 50 chr13 94527116 94527315 -25756997 + B3 SINE B2 4 210 -6 5 1306 282 56 0 0 chr13 94529123 94529159 -25755153 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1306 858 141 28 21 chr13 94529178 94529323 -25754989 - B1_Mus1 SINE Alu 0 148 3 6 1306 300 188 129 0 chr13 94529324 94529409 -25754903 - B4A SINE B4 -196 96 1 6 1306 545 314 102 41 chr13 94529513 94529972 -25754340 + MER97c DNA MER1_type? 276 762 -328 6 1306 635 279 10 73 chr13 94529954 94530159 -25754153 - B3A SINE B2 0 198 7 6 1306 1388 82 0 5 chr13 94530372 94530557 -25753755 + B2_Mm2 SINE B2 2 185 -10 6 1306 3970 119 71 28 chr13 94530809 94531605 -25752707 + RLTR13D4 LTR ERVK 1 1033 0 6 1306 307 267 27 0 chr13 94531624 94531699 -25752613 - ID4_ SINE ID 0 83 7 6 1306 4365 37 36 18 chr13 94532070 94532678 -25751634 - RLTR6_Mm LTR ERV1 -35 619 1 6 1306 761 269 89 77 chr13 94532889 94533239 -25751073 - ORR1E LTR MaLR -4 355 2 6 1306 317 145 0 16 chr13 94533567 94533630 -25750682 + C-rich Low_complexity Low_complexity 5 66 0 7 1306 1072 101 0 13 chr13 94533634 94533784 -25750528 - B1_Mus1 SINE Alu 0 148 1 7 1306 459 0 0 0 chr13 94534262 94534313 -25749999 + (CA)n Simple_repeat Simple_repeat 1 51 0 7 1306 345 47 0 0 chr13 94535219 94535262 -25749050 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 1306 501 32 0 0 chr13 94535273 94535336 -25748976 + (CA)n Simple_repeat Simple_repeat 1 63 0 7 1306 417 240 90 0 chr13 94535710 94535810 -25748502 - PB1D10 SINE Alu -8 109 1 7 1306 252 176 0 19 chr13 94536094 94536146 -25748166 - L1MC LINE L1 -512 5821 5771 7 1306 292 268 0 47 chr13 94536154 94536240 -25748072 - PB1D10 SINE Alu -7 110 29 7 1306 192 40 0 0 chr13 94536320 94536345 -25747967 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 7 1306 1205 55 0 7 chr13 94536346 94536493 -25747819 - B1_Mm SINE Alu -1 146 1 7 1306 254 316 20 20 chr13 94536610 94536710 -25747602 + MER87 LTR ERV1 420 519 -22 8 1306 330 200 210 0 chr13 94536740 94536840 -25747472 - L1MC LINE L1 -641 5692 5572 7 1306 572 331 119 24 chr13 94537014 94537308 -25747004 - RMER5 LTR ERV1 -11 523 202 8 1306 501 284 73 70 chr13 94537487 94537816 -25746496 + L1MC4 LINE L1 6679 7008 -1034 8 1306 665 259 31 6 chr13 94537851 94538010 -25746302 + RLTR42-int LTR ERVK 4664 4826 -696 8 1306 441 264 2 44 chr13 94538034 94538452 -25745860 + CT-rich Low_complexity Low_complexity 1 400 0 8 1306 736 150 49 12 chr13 94538521 94538683 -25745629 + RLTR42-int LTR ERVK 4791 4958 -564 8 1306 222 286 0 0 chr13 94539504 94539553 -25744759 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1306 519 17 0 0 chr13 94539647 94539707 -25744605 + (TG)n Simple_repeat Simple_repeat 2 61 0 8 1306 261 125 62 0 chr13 94539900 94539948 -25744364 + L1MC4 LINE L1 7295 7345 -697 8 1306 224 213 29 105 chr13 94540306 94540411 -25743901 + ID_B1 SINE B4 80 176 -48 8 1306 281 217 30 89 chr13 94540329 94540430 -25743882 + PB1D10 SINE Alu 23 117 0 8 1306 1186 68 0 0 chr13 94540679 94540825 -25743487 + B1_Mus2 SINE Alu 2 147 0 8 1306 21 95 0 0 chr13 94541579 94541642 -25742670 + GC_rich Low_complexity Low_complexity 1 63 0 9 1306 285 109 0 0 chr13 94541788 94541834 -25742478 + (CTG)n Simple_repeat Simple_repeat 1 46 0 9 1306 710 125 0 16 chr13 94543191 94543313 -25740999 + (TTCC)n Simple_repeat Simple_repeat 4 123 0 9 1306 551 155 36 18 chr13 94544359 94544471 -25739841 + B1_Mus2 SINE Alu 33 146 -1 9 1306 1357 91 16 0 chr13 94544633 94544820 -25739492 - B2_Mm2 SINE B2 -5 190 1 9 1306 778 294 25 70 chr13 94544956 94545272 -25739040 + B4 SINE B4 7 274 -18 9 1306 203 273 78 22 chr13 94545306 94545396 -25738916 - MIR SINE MIR -157 105 11 9 1306 699 265 97 105 chr13 94545663 94546043 -25738269 + MTE2a LTR MaLR 1 377 -2 9 1306 2199 140 41 27 chr13 94546073 94546513 -25737799 - RMER6A LTR ERVK 0 756 311 9 1306 198 91 0 0 chr13 94546514 94546547 -25737765 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 9 1306 1380 101 16 0 chr13 94546548 94546736 -25737576 - B2_Mm2 SINE B2 -4 191 1 1 1306 301 298 93 78 chr13 94546879 94547137 -25737175 + Lx8 LINE L1 7212 7473 0 1 1306 305 332 93 20 chr13 94547309 94547603 -25736709 - L1MC4a LINE L1 -1927 5955 5633 1 1306 488 76 65 11 chr13 94547603 94547696 -25736616 + L1Md_F2 LINE L1 6484 6581 -1 1 1306 305 332 93 20 chr13 94547696 94547757 -25736555 - L1MC4a LINE L1 -2250 5632 5575 1 1306 19486 85 17 9 chr13 94547779 94551201 -25733111 - L1_Mus2 LINE L1 -1 6635 3120 1 1306 780 232 44 11 chr13 94551222 94551405 -25732907 - B3A SINE B2 -9 189 1 1 1306 1523 272 147 25 chr13 94551491 94552293 -25732019 - L1MC4a LINE L1 -939 5207 4308 1 1306 905 147 3 6 chr13 94552312 94552637 -25731675 + (TG)n Simple_repeat Simple_repeat 1 323 0 1 1306 960 59 0 22 chr13 94553273 94553412 -25730900 + B1_Mus2 SINE Alu 12 147 0 1 1306 557 203 32 8 chr13 94553574 94553698 -25730614 - B1_Mur1 SINE Alu -20 129 3 1 1306 1039 208 24 5 chr13 94554009 94554217 -25730095 - B3 SINE B2 0 216 5 1 1306 567 153 0 0 chr13 94554244 94554342 -25729970 + (TA)n Simple_repeat Simple_repeat 1 98 0 1 1306 375 259 95 0 chr13 94554383 94554499 -25729813 + ID_B1 SINE B4 84 210 -14 1 1306 248 0 31 0 chr13 94554499 94554531 -25729781 + (CAAG)n Simple_repeat Simple_repeat 4 36 0 1 1306 252 139 47 0 chr13 94554618 94554661 -25729651 + B1_Mur3 SINE Alu 59 103 -46 1 1306 414 0 0 0 chr13 94554676 94554722 -25729590 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1306 504 0 0 0 chr13 94554722 94554777 -25729535 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1306 579 285 0 14 chr13 94555514 94555653 -25728659 + RSINE1 SINE B4 29 165 0 1 1306 227 191 16 0 chr13 94555655 94555718 -25728594 + (CA)n Simple_repeat Simple_repeat 1 64 0 1 1306 324 0 0 0 chr13 94556559 94556595 -25727717 + (GA)n Simple_repeat Simple_repeat 1 36 0 1 1306 2829 137 12 7 chr13 94556702 94557121 -25727191 - MTC LTR MaLR 0 421 1 1 1306 261 281 0 0 chr13 94558168 94558232 -25726080 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1306 656 275 94 9 chr13 94559266 94559490 -25724822 + MTD LTR MaLR 33 275 -144 1 1306 21 0 0 0 chr13 94560384 94560405 -25723907 + GC_rich Low_complexity Low_complexity 1 21 0 1 1306 241 48 0 67 chr13 94561048 94561093 -25723219 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 1 1306 585 286 84 32 chr13 94561683 94561932 -25722380 + B4 SINE B4 7 268 -24 1 1306 261 0 0 0 chr13 94561944 94561973 -25722339 + (CA)n Simple_repeat Simple_repeat 1 29 0 1 1306 324 188 0 0 chr13 94562312 94562376 -25721936 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1306 315 71 0 0 chr13 94562375 94562417 -25721895 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1306 676 199 0 30 chr13 94562424 94562559 -25721753 - RSINE1 SINE B4 -34 131 1 1 1306 658 246 40 43 chr13 94562888 94563016 -25721296 - L1MB8 LINE L1 -1 6177 6054 1 1306 324 0 0 0 chr13 94563016 94563052 -25721260 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1306 658 246 40 43 chr13 94563052 94563199 -25721113 - L1MB8 LINE L1 -125 6053 5904 1 1306 324 0 0 0 chr13 94564222 94564258 -25720054 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1306 425 325 15 38 chr13 94564550 94564788 -25719524 - L1M5 LINE L1 -1402 4744 4511 1 1306 240 250 82 55 chr13 94565699 94565809 -25718503 - MIRb SINE MIR -130 138 26 1 1306 1169 22 0 14 chr13 94567791 94567929 -25716383 + B1_Mus1 SINE Alu 1 136 -12 1 1306 554 0 15 0 chr13 94567930 94567996 -25716316 + (CAAAA)n Simple_repeat Simple_repeat 2 68 0 1 1306 1271 161 15 0 chr13 94568322 94568521 -25715791 + B3 SINE B2 1 202 -14 1 1306 688 154 8 33 chr13 94568634 94568755 -25715557 + PB1D9 SINE Alu 2 119 -1 1 1306 1244 34 0 7 chr13 94568918 94569065 -25715247 + B1_Mus2 SINE Alu 2 147 0 1 1306 513 0 0 0 chr13 94569258 94569315 -25714997 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1306 265 231 185 11 chr13 94570017 94570109 -25714203 + MIRb SINE MIR 92 199 -69 1 1306 41591 13 1 6 chr13 94570142 94576382 -25707930 - L1Md_A LINE L1 0 6582 381 1 1306 805 257 76 55 chr13 94576482 94576811 -25707501 - L1MB8 LINE L1 -1 6177 5842 1 1306 625 238 201 50 chr13 94576848 94577361 -25706951 - L1MB8 LINE L1 -385 5786 5182 1 1306 313 229 0 0 chr13 94578426 94578487 -25705825 + PB1D7 SINE Alu 48 108 -12 1 1306 344 268 17 26 chr13 94579078 94579193 -25705119 - PB1D10 SINE Alu -1 116 3 1 1306 207 0 0 0 chr13 94579356 94579379 -25704933 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1306 296 303 110 31 chr13 94579392 94579620 -25704692 + Kanga2_a DNA Tc2 56 301 -587 1 1306 189 0 0 0 chr13 94579771 94579792 -25704520 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 1 1306 1203 68 0 0 chr13 94579809 94579957 -25704355 + B1_Mus1 SINE Alu 1 148 0 1 1306 7603 52 16 21 chr13 94580016 94580988 -25703324 - L1_Mus2 LINE L1 -1 6565 5598 1 1306 335 310 86 0 chr13 94580991 94581165 -25703147 + Kanga2_a DNA Tc2 533 721 -167 1 1306 221 358 79 1 chr13 94582108 94582248 -25702064 - MIRb SINE MIR -92 176 26 1 1306 395 193 80 0 chr13 94583102 94583190 -25701122 + B3 SINE B2 122 216 0 1 1306 3088 56 0 5 chr13 94585647 94586039 -25698273 - L1Md_F2 LINE L1 -2 6580 6191 1 1306 1143 82 0 0 chr13 94586066 94586213 -25698099 + B1_Mus1 SINE Alu 2 148 0 1 1306 225 0 0 0 chr13 94587285 94587310 -25697002 + (TGGGGG)n Simple_repeat Simple_repeat 6 30 0 1 1306 265 148 109 18 chr13 94587310 94587365 -25696947 + B3 SINE B2 10 69 -147 1 1306 992 146 6 0 chr13 94587374 94587552 -25696760 + CT-rich Low_complexity Low_complexity 2 180 0 1 1306 560 164 15 15 chr13 94587545 94587624 -25696688 + polypyrimidine Low_complexity Low_complexity 60 139 0 1 1306 1071 139 0 0 chr13 94587624 94587804 -25696508 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 1 1306 560 164 15 15 chr13 94587804 94587860 -25696452 + polypyrimidine Low_complexity Low_complexity 4 59 0 1 1306 510 290 41 34 chr13 94588931 94589165 -25695147 - ORR1E LTR MaLR -143 241 10 1 1306 929 202 174 126 chr13 94589342 94589699 -25694613 - ORR1D1 LTR MaLR 0 374 1 1 1306 396 330 104 9 chr13 94590911 94591122 -25693190 + MIRb SINE MIR 24 254 -14 1 1306 569 311 116 14 chr13 94592016 94592300 -25692012 + LTR16E2 LTR ERVL 226 538 -30 1 1306 321 301 14 23 chr13 94592338 94592508 -25691804 - MIR SINE MIR -64 204 31 1 1306 670 241 90 62 chr13 94592845 94593133 -25691179 - MER33 DNA MER1_type -5 319 24 1 1306 8094 93 14 14 chr13 94593557 94595370 -25688942 - L1_Mus4 LINE L1 -4 6632 4823 1 1306 368 226 74 11 chr13 94596230 94596325 -25687987 + B3A SINE B2 64 165 -33 1 1306 223 188 42 0 chr13 94596343 94596391 -25687921 + CT-rich Low_complexity Low_complexity 3 52 0 1 1306 228 282 47 12 chr13 94596408 94596494 -25687818 + B4A SINE B4 79 167 -125 1 1306 324 239 53 21 chr13 94596428 94596522 -25687790 + PB1D10 SINE Alu 14 110 -7 1 1306 800 71 9 0 chr13 94596581 94596693 -25687619 + (GGAA)n Simple_repeat Simple_repeat 3 115 0 1 1306 776 278 63 0 chr13 94596695 94596900 -25687412 + ID_B1 SINE B4 7 224 0 1 1306 281 333 0 0 chr13 94597089 94597173 -25687139 + (TG)n Simple_repeat Simple_repeat 2 85 0 1 1306 238 0 53 26 chr13 94597701 94597739 -25686573 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1306 1053 217 19 9 chr13 94598249 94598463 -25685849 - B3 SINE B2 0 216 1 1 1306 222 253 276 0 chr13 94598970 94599057 -25685255 + RSINE1 SINE B4 38 148 -17 1 1306 428 213 8 0 chr13 94599252 94599374 -25684938 + CT-rich Low_complexity Low_complexity 2 124 0 1 1306 822 254 56 0 chr13 94599416 94599613 -25684699 - B3 SINE B2 -8 208 1 1 1306 1075 139 23 6 chr13 94599646 94599819 -25684493 - B2_Mm2 SINE B2 -19 176 1 1 1306 782 295 77 11 chr13 94599862 94600136 -25684176 + B4A SINE B4 1 292 0 1 1306 2426 201 54 22 chr13 94601405 94601944 -25682368 - RLTR20B2 LTR ERVK -4 556 1 1 1306 6636 132 70 13 chr13 94601944 94603145 -25681167 - MYSERV16_I-int LTR ERVK 0 2326 1058 1 1306 4233 165 80 54 chr13 94603141 94603346 -25680966 - MYSERV16_I-int LTR ERVK -1392 934 756 1 1306 951 37 85 50 chr13 94603346 94603487 -25680825 + B1_Mus2 SINE Alu 2 147 0 1 1306 4233 165 80 54 chr13 94603487 94604186 -25680126 - MYSERV16_I-int LTR ERVK -1571 755 7 1 1306 352 235 0 29 chr13 94604273 94604378 -25679934 - RMER3D-int LTR ERVK -1629 1213 1112 1 1306 3084 76 2 5 chr13 94604601 94604998 -25679314 - MTA_Mm LTR MaLR 0 396 1 1 1306 396 0 0 0 chr13 94605114 94605158 -25679154 + (TC)n Simple_repeat Simple_repeat 2 45 0 1 1306 1028 45 0 0 chr13 94605159 94605291 -25679021 - B1_Mus1 SINE Alu -6 142 11 1 1306 242 262 28 0 chr13 94605193 94605334 -25678978 - ORR1B1-int LTR MaLR -755 754 610 1 1306 2290 210 41 24 chr13 94605918 94606455 -25677857 - RLTR20B1 LTR ERVK -17 546 1 1 1306 512 15 15 0 chr13 94606558 94606623 -25677689 + (TG)n Simple_repeat Simple_repeat 2 67 0 1 1306 339 149 0 0 chr13 94606625 94606699 -25677613 + (GA)n Simple_repeat Simple_repeat 1 74 0 1 1306 222 289 0 13 chr13 94607252 94607329 -25676983 + CT-rich Low_complexity Low_complexity 1 76 0 1 1306 563 246 0 0 chr13 94607329 94607451 -25676861 - ID_B1 SINE B4 -21 203 82 1 1306 589 303 25 10 chr13 94607484 94607499 -25676813 - B3 SINE B2 -12 204 190 1 1306 1966 149 121 13 chr13 94607499 94607879 -25676433 - MTC LTR MaLR 0 421 1 1 1306 589 303 25 10 chr13 94607879 94608063 -25676249 - B3 SINE B2 -27 189 4 1 1306 222 91 0 0 chr13 94608691 94608724 -25675588 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 1 1306 415 141 56 56 chr13 94611258 94611438 -25672874 + (CTGTG)n Simple_repeat Simple_repeat 1 180 0 1 1306 257 139 58 35 chr13 94611451 94611622 -25672690 + (CTGTG)n Simple_repeat Simple_repeat 1 175 0 1 1306 425 181 45 39 chr13 94611636 94611814 -25672498 + (CTGTG)n Simple_repeat Simple_repeat 1 179 0 1 1306 258 111 72 29 chr13 94611832 94611971 -25672341 + (CTGTG)n Simple_repeat Simple_repeat 1 145 0 1 1306 222 246 51 28 chr13 94612079 94612255 -25672057 + (CTGTG)n Simple_repeat Simple_repeat 1 180 0 1 1306 272 127 52 46 chr13 94612292 94612465 -25671847 + (CTGTG)n Simple_repeat Simple_repeat 1 174 0 1 1306 274 153 68 0 chr13 94612537 94612700 -25671612 + (CTGTG)n Simple_repeat Simple_repeat 1 174 0 1 1306 420 149 69 26 chr13 94612735 94613351 -25670961 + (CTGTG)n Simple_repeat Simple_repeat 1 642 0 1 1306 375 142 78 39 chr13 94613378 94613613 -25670699 + (CTGTG)n Simple_repeat Simple_repeat 1 244 0 1 1306 378 0 0 0 chr13 94613773 94613815 -25670497 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1306 1048 345 68 24 chr13 94613881 94614498 -25669814 - Lx8 LINE L1 0 7473 6830 2 1306 4148 63 0 2 chr13 94614774 94615286 -25669026 + L1Md_F2 LINE L1 6053 6563 -19 2 1306 186 43 0 0 chr13 94615289 94615312 -25669000 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2 1306 319 264 103 34 chr13 94615330 94615534 -25668778 + L1MEf LINE L1 1096 1313 -4887 2 1306 207 0 0 0 chr13 94615543 94615566 -25668746 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1306 453 276 122 0 chr13 94615595 94615776 -25668536 + ID_B1 SINE B4 16 218 -6 2 1306 24 0 0 0 chr13 94615776 94615800 -25668512 + AT_rich Low_complexity Low_complexity 1 24 0 2 1306 304 317 0 0 chr13 94615818 94615900 -25668412 - ID4 SINE ID 0 83 2 2 1306 342 0 0 0 chr13 94616055 94616093 -25668219 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 2 1306 1427 69 26 21 chr13 94616159 94616351 -25667961 - B2_Mm2 SINE B2 -2 193 1 2 1306 994 114 0 21 chr13 94616360 94616503 -25667809 - B1_Mur3 SINE Alu -6 143 4 2 1306 1565 193 89 50 chr13 94617640 94618001 -25666311 + MTD LTR MaLR 1 387 -32 2 1306 634 217 81 53 chr13 94618001 94618210 -25666102 - B3 SINE B2 0 216 2 2 1306 1565 193 89 50 chr13 94618210 94618251 -25666061 + MTD LTR MaLR 388 419 0 2 1306 207 170 0 36 chr13 94618310 94618365 -25665947 + T-rich Low_complexity Low_complexity 6 58 0 2 1306 895 280 71 7 chr13 94618365 94618660 -25665652 - L1MB7 LINE L1 -69 6115 5802 2 1306 642 256 20 10 chr13 94618797 94618994 -25665318 - L1MB7 LINE L1 -699 5479 5281 2 1306 423 0 0 0 chr13 94619260 94619307 -25665005 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1306 198 0 0 0 chr13 94620912 94620934 -25663378 + (T)n Simple_repeat Simple_repeat 1 22 0 2 1306 27 29 0 0 chr13 94621907 94621941 -25662371 + AT_rich Low_complexity Low_complexity 1 34 0 2 1306 461 17 17 0 chr13 94623295 94623353 -25660959 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1306 225 0 0 0 chr13 94623515 94623540 -25660772 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2 1306 551 250 8 8 chr13 94623553 94623682 -25660630 - B3A SINE B2 -66 132 4 2 1306 200 31 0 59 chr13 94625786 94625820 -25658492 + (CCCCCA)n Simple_repeat Simple_repeat 2 33 0 2 1306 1418 158 84 0 chr13 94626406 94626691 -25657621 - Lx9 LINE L1 -2 7642 7334 2 1306 562 317 21 0 chr13 94626868 94627054 -25657258 + B3A SINE B2 9 198 0 2 1306 999 153 0 3 chr13 94627497 94627800 -25656512 + CT-rich Low_complexity Low_complexity 1 302 0 2 1306 2826 170 84 18 chr13 94627928 94628486 -25655826 - RLTR17 LTR ERVK 0 692 98 2 1306 1269 21 0 14 chr13 94628870 94629018 -25655294 - B1_Mm SINE Alu 0 147 2 2 1306 280 276 0 13 chr13 94629160 94629237 -25655075 - PB1 SINE Alu -6 121 46 2 1306 521 151 137 152 chr13 94629272 94629364 -25654948 + Tigger7 DNA MER2_type 2276 2358 -133 2 1306 724 143 385 13 chr13 94629364 94629520 -25654792 + B3 SINE B2 3 216 0 2 1306 521 151 137 152 chr13 94629520 94629638 -25654674 + Tigger7 DNA MER2_type 2359 2483 -8 2 1306 516 56 0 0 chr13 94630141 94630213 -25654099 + (TCTCTG)n Simple_repeat Simple_repeat 6 77 0 2 1306 369 0 0 0 chr13 94630213 94630254 -25654058 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1306 683 195 0 0 chr13 94630254 94630372 -25653940 - B1_Mus2 SINE Alu -27 120 3 2 1306 572 186 365 0 chr13 94630923 94631079 -25653233 + B3 SINE B2 4 216 0 2 1306 316 281 104 35 chr13 94631098 94631242 -25653070 + B3A SINE B2 27 180 -18 2 1306 504 0 0 0 chr13 94633096 94633152 -25651160 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 2 1306 283 392 19 13 chr13 94633152 94633307 -25651005 + MER102c DNA MER1_type 126 281 -50 2 1306 421 258 11 0 chr13 94633473 94633566 -25650746 + RSINE1 SINE B4 2 95 -70 2 1306 560 232 99 31 chr13 94633629 94633731 -25650581 + RLTR20B1 LTR ERVK 356 454 -109 2 1306 528 65 0 0 chr13 94633731 94633808 -25650504 + (TC)n Simple_repeat Simple_repeat 2 78 0 2 1306 366 23 0 0 chr13 94633808 94633850 -25650462 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1306 560 232 99 31 chr13 94633850 94633937 -25650375 + RLTR20B1 LTR ERVK 455 557 -6 2 1307 30 45 0 0 chr13 94634001 94634045 -25650267 + AT_rich Low_complexity Low_complexity 1 44 0 2 1307 362 306 153 32 chr13 94635112 94635328 -25648984 - Charlie24 DNA MER1_type -581 1869 1628 2 1307 183 114 0 0 chr13 94635562 94635597 -25648715 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 1307 226 324 147 26 chr13 94635658 94635848 -25648464 - Charlie24 DNA MER1_type -1284 1166 954 2 1307 775 257 129 0 chr13 94635975 94636247 -25648065 - MTD LTR MaLR 0 419 113 2 1307 1844 186 124 28 chr13 94636247 94636755 -25647557 - RLTR31B_Mm LTR ERVK 0 557 1 2 1307 250 209 43 29 chr13 94636771 94636840 -25647472 - MTD LTR MaLR -341 80 11 2 1307 1747 242 74 24 chr13 94637628 94638085 -25646227 - Lx8 LINE L1 -2 7471 6992 2 1307 1530 219 7 20 chr13 94638107 94638321 -25645991 + Lx8 LINE L1 6585 6799 -674 2 1307 2316 112 12 0 chr13 94638321 94638644 -25645668 + ORR1A2 LTR MaLR 1 327 0 2 1307 1530 219 7 20 chr13 94638644 94638727 -25645585 + Lx8 LINE L1 6800 6878 -595 2 1307 306 306 66 8 chr13 94638735 94638857 -25645455 - L1MEc LINE L1 -5710 690 562 2 1307 685 248 145 48 chr13 94638944 94639296 -25645016 - L1MEc LINE L1 -5978 422 37 2 1307 2988 40 91 3 chr13 94639539 94639913 -25644399 + MTB_Mm LTR MaLR 1 407 0 2 1307 585 295 129 57 chr13 94640109 94640828 -25643484 - L1MC4 LINE L1 -4283 1932 1162 2 1307 536 75 12 0 chr13 94640876 94640883 -25643429 + (TTTC)n Simple_repeat Simple_repeat 2 8 0 2 1307 189 0 0 0 chr13 94640883 94640904 -25643408 + (CTG)n Simple_repeat Simple_repeat 1 21 0 2 1307 536 75 12 0 chr13 94640904 94640976 -25643336 + (TTTC)n Simple_repeat Simple_repeat 1 73 0 2 1307 1153 61 146 6 chr13 94640994 94641159 -25643153 - B2_Mm2 SINE B2 -7 188 1 2 1307 236 195 0 252 chr13 94643347 94643450 -25640862 + BC1_Mm scRNA scRNA 5 81 -2 2 1307 1567 192 112 16 chr13 94644101 94644477 -25639835 - MTD LTR MaLR -7 412 1 2 1307 207 372 0 0 chr13 94644573 94644651 -25639661 + MIR SINE MIR 1 78 -184 2 1307 2484 134 34 3 chr13 94644674 94645055 -25639257 - ORR1B1 LTR MaLR 0 394 2 2 1307 692 289 43 38 chr13 94645156 94645365 -25638947 - B3A SINE B2 0 216 7 2 1307 469 150 0 0 chr13 94645842 94645922 -25638390 + B2_Mm2 SINE B2 5 84 -111 2 1307 1437 65 0 26 chr13 94645935 94646126 -25638186 + B2_Mm2 SINE B2 1 186 -9 2 1307 470 274 0 26 chr13 94646582 94646698 -25637614 - PB1D10 SINE Alu 0 117 5 2 1307 1017 149 0 0 chr13 94647328 94647503 -25636809 + (TTC)n Simple_repeat Simple_repeat 2 176 0 2 1307 1096 71 0 41 chr13 94647507 94647654 -25636658 - B1_Mus1 SINE Alu -5 143 3 2 1307 590 39 0 13 chr13 94648643 94648721 -25635591 + (TTA)n Simple_repeat Simple_repeat 2 78 0 2 1307 397 241 102 0 chr13 94648762 94648870 -25635442 - B3 SINE B2 -97 119 1 2 1307 366 23 0 0 chr13 94649230 94649273 -25635039 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1307 440 258 75 0 chr13 94649891 94650011 -25634301 + ID_B1 SINE B4 84 212 -12 2 1307 228 67 0 0 chr13 94650011 94650041 -25634271 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2 1307 326 263 115 8 chr13 94651463 94651591 -25632721 + Lx7 LINE L1 5783 5919 -1554 2 1307 282 287 10 50 chr13 94651955 94652054 -25632258 + MER33 DNA MER1_type 22 116 -208 2 1307 259 200 60 30 chr13 94655498 94655565 -25628747 + MTEb LTR MaLR 293 361 -18 2 1307 505 110 22 0 chr13 94655566 94655657 -25628655 + (TC)n Simple_repeat Simple_repeat 1 93 0 2 1307 966 156 0 0 chr13 94655639 94655812 -25628500 + CT-rich Low_complexity Low_complexity 3 175 0 2 1307 210 143 0 0 chr13 94655815 94655850 -25628462 + (TTCTCC)n Simple_repeat Simple_repeat 3 37 0 2 1307 351 0 0 0 chr13 94655850 94655889 -25628423 + (TTC)n Simple_repeat Simple_repeat 3 41 0 2 1307 576 42 0 0 chr13 94655889 94655960 -25628352 + (TC)n Simple_repeat Simple_repeat 2 72 0 2 1307 327 104 0 0 chr13 94657265 94657313 -25626999 + (TTCA)n Simple_repeat Simple_repeat 3 50 0 2 1307 573 190 58 0 chr13 94657334 94657455 -25626857 - B2_Mm2 SINE B2 -66 129 2 2 1307 521 287 77 44 chr13 94659566 94659748 -25624564 + MTE2b LTR MaLR 3 190 -189 2 1307 243 0 0 0 chr13 94659757 94659784 -25624528 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1307 368 0 43 0 chr13 94660338 94660385 -25623927 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2 1307 226 276 121 60 chr13 94660554 94660720 -25623592 - L1M5 LINE L1 -1950 4196 4021 2 1307 221 333 115 0 chr13 94660738 94660773 -25623539 + ID SINE ID 44 88 -136 2 1307 211 289 131 20 chr13 94660773 94660872 -25623440 + PB1D10 SINE Alu 1 110 -7 2 1307 288 77 0 0 chr13 94660894 94660933 -25623379 + (CAA)n Simple_repeat Simple_repeat 2 40 0 2 1307 850 237 28 9 chr13 94660963 94661176 -25623136 + ID_B1 SINE B4 2 218 -6 2 1307 300 208 0 68 chr13 94661640 94661747 -25622565 - L1M3 LINE L1 -945 5358 5256 2 1307 944 168 220 0 chr13 94661747 94661920 -25622392 - B3 SINE B2 -5 211 1 2 1307 305 302 16 25 chr13 94663114 94663236 -25621076 - L1M3 LINE L1 -804 5336 5216 2 1307 575 230 36 55 chr13 94663792 94664062 -25620250 + L1M3 LINE L1 5216 5481 -831 2 1307 22 35 0 0 chr13 94664094 94664123 -25620189 + AT_rich Low_complexity Low_complexity 1 29 0 2 1307 309 311 84 0 chr13 94664177 94664296 -25620016 + B1F1 SINE Alu 1 129 -20 2 1307 277 319 0 16 chr13 94666381 94666456 -25617856 + ID4 SINE ID 3 76 -7 2 1307 2527 139 45 8 chr13 94666697 94667095 -25617217 + MTC LTR MaLR 1 413 -8 2 1307 924 79 0 0 chr13 94667919 94668045 -25616267 + (TCCCC)n Simple_repeat Simple_repeat 1 126 0 2 1307 419 92 15 0 chr13 94668895 94668960 -25615352 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 2 1307 296 286 88 0 chr13 94669262 94669353 -25614959 + MER20 DNA MER1_type 107 205 -14 2 1307 935 268 115 69 chr13 94669497 94669846 -25614466 - MLT1A1 LTR MaLR 0 408 44 3 1307 405 0 0 0 chr13 94670133 94670178 -25614134 + (ACTG)n Simple_repeat Simple_repeat 4 48 0 3 1307 258 125 0 0 chr13 94671584 94671632 -25612680 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1307 384 324 165 42 chr13 94671748 94672158 -25612154 - MLT1E3 LTR MaLR -13 667 143 3 1307 281 145 0 16 chr13 94673145 94673208 -25611104 + GA-rich Low_complexity Low_complexity 1 62 0 3 1307 1429 122 9 5 chr13 94673389 94673611 -25610701 - Lx2 LINE L1 0 6997 6775 3 1307 7142 118 21 13 chr13 94673611 94674977 -25609335 - Lx2 LINE L1 -354 6643 5262 3 1307 6845 61 16 15 chr13 94674975 94676119 -25608193 - L1VL4 LINE L1 -1742 1817 665 3 1307 3513 146 133 0 chr13 94676119 94676730 -25607582 - RLTR17 LTR ERVK 0 692 1 3 1307 5460 88 23 14 chr13 94676730 94677196 -25607116 - L1VL4 LINE L1 -5638 664 201 3 1307 351 0 0 0 chr13 94677504 94677543 -25606769 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1307 1473 108 0 9 chr13 94678391 94678615 -25605697 - L1Md_F2 LINE L1 -1 6581 6360 3 1307 351 0 0 0 chr13 94679114 94679153 -25605159 + (GA)n Simple_repeat Simple_repeat 1 39 0 3 1307 351 0 0 0 chr13 94679519 94679558 -25604754 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1307 333 0 0 0 chr13 94679558 94679594 -25604718 + (TA)n Simple_repeat Simple_repeat 2 38 0 3 1307 236 54 54 0 chr13 94680165 94680202 -25604110 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 3 1307 809 304 29 84 chr13 94682724 94683018 -25601294 + B4A SINE B4 1 280 -12 3 1307 428 0 19 0 chr13 94683018 94683070 -25601242 + (TC)n Simple_repeat Simple_repeat 2 54 0 3 1307 809 304 29 84 chr13 94683070 94683084 -25601228 + B4A SINE B4 281 292 0 3 1307 301 276 103 60 chr13 94683188 94683373 -25600939 + L1MC5 LINE L1 7661 7853 -108 3 1307 1340 142 5 27 chr13 94683706 94683930 -25600382 + URR1B DNA MER1_type 5 223 -2 3 1307 423 331 7 66 chr13 94684883 94685035 -25599277 + B1F SINE Alu 7 149 0 3 1307 449 335 28 22 chr13 94685218 94685398 -25598914 - MIRb SINE MIR -34 234 54 3 1307 275 265 153 24 chr13 94685511 94685562 -25598750 + B3 SINE B2 118 181 -35 3 1307 321 26 0 0 chr13 94685562 94685600 -25598712 + (CATA)n Simple_repeat Simple_repeat 1 38 0 3 1307 275 265 153 24 chr13 94685600 94685633 -25598679 + B3 SINE B2 182 212 -4 3 1307 351 0 0 0 chr13 94685924 94685963 -25598349 + (TC)n Simple_repeat Simple_repeat 1 39 0 3 1307 242 224 0 20 chr13 94686051 94686101 -25598211 + MLT1E1 LTR MaLR 280 328 -326 3 1307 336 48 0 0 chr13 94686426 94686468 -25597844 + (TC)n Simple_repeat Simple_repeat 1 42 0 3 1307 4107 36 2 0 chr13 94686871 94687348 -25596964 + L1_Mus1 LINE L1 6089 6566 -1 3 1307 570 15 0 0 chr13 94687448 94687515 -25596797 + (GAA)n Simple_repeat Simple_repeat 1 67 0 3 1307 261 0 0 0 chr13 94687515 94687544 -25596768 + (CAG)n Simple_repeat Simple_repeat 1 29 0 3 1307 215 271 0 0 chr13 94688360 94688408 -25595904 + MIRm SINE MIR 213 260 -16 3 1307 570 232 50 62 chr13 94688534 94688695 -25595617 - B4A SINE B4 -129 163 5 3 1307 315 0 0 0 chr13 94689295 94689330 -25594982 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1307 189 0 0 0 chr13 94689728 94689749 -25594563 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1307 1943 182 24 18 chr13 94690705 94691085 -25593227 + ORR1C2 LTR MaLR 3 384 0 3 1307 752 136 104 22 chr13 94691817 94691952 -25592360 - B1_Mus2 SINE Alu 0 147 2 3 1307 307 311 55 28 chr13 94691956 94692065 -25592247 - PB1D10 SINE Alu 0 117 6 3 1307 189 147 0 0 chr13 94692470 94692504 -25591808 + (GGAGAA)n Simple_repeat Simple_repeat 3 36 0 3 1307 878 161 21 0 chr13 94692979 94693122 -25591190 - B1_Mur2 SINE Alu -1 148 3 3 1307 1222 35 0 0 chr13 94693141 94693283 -25591029 + B1_Mus1 SINE Alu 5 146 -2 3 1307 315 0 0 0 chr13 94693283 94693318 -25590994 + (GA)n Simple_repeat Simple_repeat 2 36 0 3 1307 476 235 176 8 chr13 94693318 94693554 -25590758 - L1MA5 LINE L1 -6 6294 6020 3 1307 360 0 0 0 chr13 94693932 94693972 -25590340 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1307 1858 238 81 102 chr13 94695351 94696203 -25588109 + Lx7 LINE L1 6811 7644 -52 3 1307 363 292 6 45 chr13 94696219 94696463 -25587849 + GA-rich Low_complexity Low_complexity 1 234 0 3 1307 260 176 8 150 chr13 94696463 94696590 -25587722 + Lx7 LINE L1 7592 7692 -4 3 1307 1978 140 35 0 chr13 94697320 94697635 -25586677 - ORR1A3 LTR MaLR 0 326 1 3 1307 528 282 125 97 chr13 94697635 94697914 -25586398 + B4A SINE B4 6 292 0 3 1307 632 169 17 17 chr13 94697924 94698192 -25586120 + GA-rich Low_complexity Low_complexity 1 268 0 3 1307 1363 53 6 12 chr13 94698192 94698532 -25585780 + (GAA)n Simple_repeat Simple_repeat 1 338 0 3 1307 450 263 0 0 chr13 94698643 94698742 -25585570 - PB1D10 SINE Alu -15 102 4 3 1307 536 0 16 0 chr13 94701221 94701285 -25583027 + (TG)n Simple_repeat Simple_repeat 1 65 0 3 1307 342 0 0 0 chr13 94701285 94701322 -25582990 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1307 360 0 0 0 chr13 94701323 94701363 -25582949 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1307 796 212 196 0 chr13 94703129 94703308 -25581004 + B3 SINE B2 2 215 -1 3 1307 459 124 212 20 chr13 94703504 94703603 -25580709 + B1_Mur2 SINE Alu 31 148 -1 3 1307 198 0 0 0 chr13 94703964 94703986 -25580326 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 3 1307 370 282 122 56 chr13 94704193 94704283 -25580029 - Charlie5 DNA MER1_type -2432 192 90 3 1307 759 211 13 33 chr13 94704283 94704435 -25579877 + B1_Mur1 SINE Alu 1 149 0 3 1307 457 307 12 44 chr13 94704435 94704565 -25579747 - MER3 DNA MER1_type -73 136 7 3 1307 229 353 74 16 chr13 94704602 94704686 -25579626 + L1ME3A LINE L1 4860 4951 -1195 3 1307 900 74 0 0 chr13 94704686 94704807 -25579505 + (GAA)n Simple_repeat Simple_repeat 2 122 0 3 1307 229 353 74 16 chr13 94704807 94704843 -25579469 + L1ME3A LINE L1 4952 4987 -1159 3 1307 271 308 34 34 chr13 94705011 94705159 -25579153 + L1ME3A LINE L1 5862 6009 -164 3 1307 687 185 42 54 chr13 94705871 94706037 -25578275 + RSINE1 SINE B4 2 165 0 3 1307 203 167 0 0 chr13 94706037 94706073 -25578239 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1307 1076 212 128 36 chr13 94707319 94707623 -25576689 - IAPEY3_LTR LTR ERVK 0 332 1 3 1307 394 305 103 56 chr13 94707655 94707821 -25576491 + LTR79 LTR ERVL 276 453 -74 3 1307 1413 88 0 25 chr13 94707821 94708018 -25576294 - B2_Mm2 SINE B2 -2 193 2 3 1307 394 305 103 56 chr13 94708018 94708084 -25576228 + LTR79 LTR ERVL 454 519 -8 3 1307 1744 137 111 74 chr13 94708136 94708515 -25575797 - ORR1B1 LTR MaLR 0 394 2 3 1307 286 311 11 0 chr13 94708768 94708858 -25575454 + (CA)n Simple_repeat Simple_repeat 2 92 0 3 1307 336 274 62 62 chr13 94710067 94710180 -25574132 - MER20B DNA MER1_type -616 167 55 3 1307 687 57 0 0 chr13 94711165 94711253 -25573059 + (CCCTAA)n Simple_repeat Simple_repeat 6 93 0 3 1307 189 329 85 0 chr13 94711963 94712045 -25572267 + L2a LINE L2 3338 3426 0 3 1307 207 0 0 0 chr13 94713144 94713167 -25571145 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 3 1307 278 307 97 26 chr13 94713361 94713515 -25570797 + RSINE1 SINE B4 1 165 0 3 1307 499 307 36 24 chr13 94713525 94713692 -25570620 - B3A SINE B2 -24 174 6 3 1307 506 305 23 32 chr13 94713732 94713852 -25570460 + L1MB5 LINE L1 5737 5859 -315 3 1307 2378 115 80 0 chr13 94713852 94714217 -25570095 - ORR1B1 LTR MaLR 0 394 1 3 1307 506 305 23 32 chr13 94714217 94714313 -25569999 + L1MB5 LINE L1 5860 5951 -223 3 1307 512 289 8 15 chr13 94714322 94714436 -25569876 + RSINE1 SINE B4 21 134 -31 3 1307 3091 128 14 70 chr13 94714436 94714991 -25569321 + RLTR28 LTR ERVL 1 524 0 3 1307 512 289 8 15 chr13 94714991 94715006 -25569306 + RSINE1 SINE B4 135 149 -16 3 1307 286 321 106 6 chr13 94715094 94715254 -25569058 + L1MB4 LINE L1 5943 6118 -62 3 1307 378 335 87 92 chr13 94715261 94715629 -25568683 + MTE2b LTR MaLR 3 368 -11 3 1307 747 167 56 56 chr13 94715676 94715854 -25568458 + RMER17C LTR ERVK 1 178 -232 3 1307 270 0 0 0 chr13 94715854 94715884 -25568428 + (TC)n Simple_repeat Simple_repeat 2 31 0 3 1307 411 98 0 0 chr13 94715884 94715944 -25568368 + (TG)n Simple_repeat Simple_repeat 2 62 0 3 1307 563 288 82 7 chr13 94715957 94716104 -25568208 - RSINE1 SINE B4 -7 158 1 3 1307 2526 123 14 70 chr13 94716652 94717098 -25567214 + MTC LTR MaLR 1 421 0 3 1307 339 298 28 7 chr13 94718487 94718629 -25565683 + L1M3 LINE L1 5180 5324 -816 3 1307 784 126 32 23 chr13 94718642 94718862 -25565450 + GA-rich Low_complexity Low_complexity 1 222 0 3 1307 624 296 142 9 chr13 94718899 94719124 -25565188 + B4A SINE B4 36 290 -2 3 1307 189 171 0 0 chr13 94719136 94719171 -25565141 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1307 571 216 0 47 chr13 94719244 94719351 -25564961 + PB1D9 SINE Alu 2 103 -17 3 1307 286 268 165 0 chr13 94720149 94720276 -25564036 - MLT1F1 LTR MaLR 0 569 422 3 1307 252 288 0 0 chr13 94720576 94720635 -25563677 + CT-rich Low_complexity Low_complexity 2 60 0 3 1307 384 208 142 67 chr13 94721263 94721397 -25562915 + LTR48 LTR ERV1 9 152 -635 3 1307 222 37 0 0 chr13 94722146 94722173 -25562139 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 3 1307 658 286 159 17 chr13 94723192 94723487 -25560825 + MLT1A1 LTR MaLR 53 389 -19 3 1307 2534 40 0 7 chr13 94723989 94724282 -25560030 + L1_Mm LINE L1 5294 5586 -297 3 1307 8401 33 4 3 chr13 94724282 94725277 -25559035 + L1Md_F2 LINE L1 5587 6582 0 3 1307 991 96 129 24 chr13 94725430 94725600 -25558712 + B2_Mm2 SINE B2 1 188 -7 3 1307 484 266 9 0 chr13 94725706 94725815 -25558497 + PB1D10 SINE Alu 3 112 -5 3 1307 576 272 127 0 chr13 94726081 94726239 -25558073 + B3A SINE B2 1 178 -20 3 1307 403 217 54 0 chr13 94726271 94726363 -25557949 + U6 snRNA snRNA 10 106 -1 3 1307 750 289 25 15 chr13 94726391 94726588 -25557724 + B3 SINE B2 18 216 0 3 1307 337 231 149 28 chr13 94727195 94727302 -25557010 - MLT1A1 LTR MaLR -12 396 277 4 1307 561 275 0 37 chr13 94727278 94727414 -25556898 + RSINE1 SINE B4 35 165 0 4 1307 198 167 0 0 chr13 94727414 94727450 -25556862 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1307 2097 93 17 93 chr13 94728344 94728700 -25555612 + ORR1A4 LTR MaLR 1 329 0 4 1307 1895 143 23 68 chr13 94729791 94730218 -25554094 - RMER17C LTR ERVK -2 408 1 4 1307 1213 63 0 0 chr13 94730285 94730428 -25553884 + B1_Mus1 SINE Alu 1 143 -5 4 1307 594 0 0 0 chr13 94730431 94730497 -25553815 + (GAA)n Simple_repeat Simple_repeat 2 67 0 4 1307 28 71 0 0 chr13 94730570 94730626 -25553686 + AT_rich Low_complexity Low_complexity 1 56 0 4 1307 235 371 36 48 chr13 94730945 94731112 -25553200 - MIRb SINE MIR -70 198 34 4 1307 528 148 277 0 chr13 94731806 94731907 -25552405 + B1_Mus1 SINE Alu 2 130 -18 4 1307 1499 257 77 28 chr13 94732253 94732757 -25551555 - L1_Mur3 LINE L1 -231 5649 5121 4 1307 325 230 133 30 chr13 94732817 94732986 -25551326 + MER112 DNA MER1_type 7 185 -76 4 1307 228 35 0 0 chr13 94733756 94733785 -25550527 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 4 1307 369 0 0 0 chr13 94734173 94734214 -25550098 + (T)n Simple_repeat Simple_repeat 1 41 0 4 1307 1770 151 57 153 chr13 94735296 94735734 -25548578 + RMER10B LTR ERVL 3 398 0 4 1307 919 215 63 10 chr13 94735953 94736160 -25548152 + ID_B1 SINE B4 3 220 -4 4 1307 693 243 85 28 chr13 94737777 94737989 -25546323 + ID_B1 SINE B4 1 224 0 4 1307 395 220 35 6 chr13 94738651 94738820 -25545492 + CT-rich Low_complexity Low_complexity 4 177 0 4 1307 250 222 19 0 chr13 94738820 94738874 -25545438 + C-rich Low_complexity Low_complexity 3 57 0 4 1307 1269 218 50 7 chr13 94738874 94739151 -25545161 + Lx9 LINE L1 6905 7193 -451 4 1307 291 310 34 34 chr13 94739255 94739372 -25544940 + RMER1C Other Other 24 140 -1202 4 1307 1556 192 111 29 chr13 94739414 94739581 -25544731 + RMER1C Other Other 826 1000 -342 4 1307 513 0 0 0 chr13 94739581 94739638 -25544674 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1307 1556 192 111 29 chr13 94739638 94739850 -25544462 + RMER1C Other Other 1001 1236 -106 4 1307 917 122 7 21 chr13 94739858 94740001 -25544311 + B1_Mus2 SINE Alu 6 146 -1 4 1307 313 265 20 0 chr13 94740002 94740100 -25544212 + RMER1C Other Other 1241 1340 -2 4 1307 262 298 43 22 chr13 94740379 94740564 -25543748 - L1M5 LINE L1 -3205 2941 2753 4 1307 404 239 81 18 chr13 94740615 94740726 -25543586 + PB1 SINE Alu 6 123 -4 4 1307 248 318 0 0 chr13 94740739 94740805 -25543507 + ID4_ SINE ID 2 67 -16 4 1307 24 32 0 0 chr13 94740859 94740890 -25543422 + AT_rich Low_complexity Low_complexity 1 31 0 4 1307 340 261 179 0 chr13 94741216 94741350 -25542962 - Lx8 LINE L1 -59 7414 7257 4 1307 776 238 109 19 chr13 94741349 94741559 -25542753 - Lx8 LINE L1 -828 6645 6417 4 1307 188 67 0 32 chr13 94741621 94741652 -25542660 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 4 1307 1586 239 69 17 chr13 94741684 94742075 -25542237 + RLTR16 LTR ERVK 1 400 -105 4 1307 415 0 36 0 chr13 94742075 94742130 -25542182 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1307 1586 239 69 17 chr13 94742130 94742218 -25542094 + RLTR16 LTR ERVK 401 504 -1 4 1307 205 204 0 22 chr13 94742218 94742263 -25542049 + CT-rich Low_complexity Low_complexity 3 46 0 4 1307 1886 146 50 16 chr13 94742978 94743298 -25541014 - MTC LTR MaLR -90 331 1 4 1307 43 35 0 0 chr13 94743849 94743906 -25540406 + AT_rich Low_complexity Low_complexity 1 57 0 4 1307 370 293 0 0 chr13 94744341 94744423 -25539889 - ID4_ SINE ID 0 83 2 4 1307 465 179 50 33 chr13 94744447 94744568 -25539744 + Lx9 LINE L1 7522 7644 0 4 1307 875 266 10 29 chr13 94745067 94745272 -25539040 - ID_B1 SINE B4 -8 216 16 4 1307 254 295 0 71 chr13 94745197 94745281 -25539031 - BC1_Mm scRNA scRNA -67 85 8 4 1307 233 333 63 8 chr13 94745361 94745488 -25538824 + MER94 DNA AcHobo 1 134 0 4 1307 479 296 122 70 chr13 94746076 94746479 -25537833 - Charlie2b DNA MER1_type -93 2689 2266 4 1307 857 212 53 19 chr13 94746520 94746727 -25537585 + B3 SINE B2 3 216 0 4 1307 1270 20 0 7 chr13 94746826 94746974 -25537338 + B1_Mm SINE Alu 1 147 0 4 1307 426 228 13 0 chr13 94747786 94747865 -25536447 - Charlie2b DNA MER1_type -2457 325 246 4 1307 440 317 78 75 chr13 94749616 94749670 -25534642 - MLT2B5 LTR ERVL 0 601 554 4 1307 336 48 0 0 chr13 94749670 94749712 -25534600 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1307 440 317 78 75 chr13 94749712 94750029 -25534283 - MLT2B5 LTR ERVL -48 553 229 4 1307 350 264 25 124 chr13 94750069 94750190 -25534122 - B4 SINE B4 0 292 184 4 1307 217 222 127 0 chr13 94750173 94750236 -25534076 - B4 SINE B4 -220 72 2 4 1307 308 241 0 88 chr13 94750240 94750331 -25533981 - MTEb LTR MaLR -199 180 98 4 1307 379 285 162 6 chr13 94750257 94750430 -25533882 - MLT2B5 LTR ERVL -354 200 1 4 1307 702 311 60 34 chr13 94750520 94750789 -25533523 + MLT1C LTR MaLR 192 467 0 4 1307 23 54 0 0 chr13 94750917 94750954 -25533358 + AT_rich Low_complexity Low_complexity 1 37 0 4 1307 548 335 120 25 chr13 94751372 94751855 -25532457 - MT2A LTR ERVL 0 533 5 4 1307 461 319 76 0 chr13 94751857 94752001 -25532311 + RSINE1 SINE B4 4 158 -7 4 1307 352 392 32 0 chr13 94752096 94752254 -25532058 - MER45A DNA Tip100 -12 166 4 4 1307 1250 48 0 0 chr13 94752386 94752533 -25531779 + B1_Mm SINE Alu 1 147 0 4 1307 208 102 0 78 chr13 94752535 94752599 -25531713 + A-rich Low_complexity Low_complexity 2 60 0 4 1307 613 255 39 75 chr13 94752690 94752944 -25531368 + Lx9 LINE L1 7390 7634 -10 4 1307 252 211 60 100 chr13 94753003 94753103 -25531209 - LTR48 LTR ERV1 -215 572 477 4 1307 332 234 40 50 chr13 94753214 94753313 -25530999 + PB1D10 SINE Alu 13 110 -7 4 1307 234 300 0 0 chr13 94753334 94753404 -25530908 + ID4_ SINE ID 3 72 -11 4 1307 315 0 0 0 chr13 94753408 94753443 -25530869 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 4 1307 308 203 43 14 chr13 94754085 94754097 -25530215 + ID_B1 SINE B4 76 145 -77 4 1307 346 130 0 36 chr13 94754097 94754153 -25530159 + B1_Mur4 SINE Alu 7 60 -90 4 1307 255 188 112 56 chr13 94754221 94754328 -25529984 + RLTR25B LTR ERVK 397 509 -519 4 1307 862 47 0 0 chr13 94754265 94754371 -25529941 + B1_Mus2 SINE Alu 42 147 0 4 1307 242 284 151 98 chr13 94754733 94755038 -25529274 - ORR1B1 LTR MaLR -16 378 58 4 1307 351 0 0 0 chr13 94755964 94756003 -25528309 + (T)n Simple_repeat Simple_repeat 1 39 0 4 1307 1238 41 0 0 chr13 94756013 94756159 -25528153 - B1_Mm SINE Alu 0 147 2 4 1307 225 0 0 0 chr13 94756495 94756520 -25527792 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1307 208 89 0 82 chr13 94756745 94756794 -25527518 + A-rich Low_complexity Low_complexity 4 48 0 4 1307 704 208 81 30 chr13 94757557 94757833 -25526479 - RMER10A LTR ERVL -2 396 60 4 1307 225 236 71 54 chr13 94758021 94758133 -25526179 - RLTR21 LTR ERVK -1077 495 382 4 1307 241 314 9 89 chr13 94758189 94758208 -25526104 + MT2B2 LTR ERVL 149 183 -401 4 1307 278 237 0 0 chr13 94758208 94758267 -25526045 + B4A SINE B4 88 146 -146 4 1307 501 267 0 0 chr13 94758216 94758321 -25525991 + PB1D10 SINE Alu 11 115 -2 4 1307 241 314 9 89 chr13 94758267 94758301 -25526011 + MT2B2 LTR ERVL 184 251 -333 4 1307 258 231 114 13 chr13 94758379 94758458 -25525854 + B4 SINE B4 3 89 -203 4 1307 270 254 119 0 chr13 94758547 94758560 -25525752 + B4A SINE B4 69 143 -149 4 1307 303 204 0 0 chr13 94758560 94758614 -25525698 + PB1D9 SINE Alu 5 58 -62 4 1307 239 309 0 0 chr13 94758616 94758697 -25525615 + GA-rich Low_complexity Low_complexity 2 82 0 4 1307 550 143 35 79 chr13 94758699 94758799 -25525513 + B1_Mur3 SINE Alu 40 139 -10 4 1307 299 25 25 0 chr13 94758799 94758839 -25525473 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 4 1307 550 143 35 79 chr13 94758839 94758852 -25525460 + B1_Mur3 SINE Alu 140 148 -1 4 1307 323 239 8 0 chr13 94758957 94759087 -25525225 + (TG)n Simple_repeat Simple_repeat 2 132 0 4 1307 342 188 0 0 chr13 94759090 94759154 -25525158 - ID4 SINE ID -11 72 9 4 1307 207 196 0 19 chr13 94760491 94760543 -25523769 + (CCA)n Simple_repeat Simple_repeat 2 52 0 4 1307 189 0 0 0 chr13 94760562 94760583 -25523729 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 4 1307 266 233 93 101 chr13 94760791 94760920 -25523392 - MIRb SINE MIR -51 217 90 4 1307 614 236 64 147 chr13 94761190 94761278 -25523034 + B4 SINE B4 7 80 -212 4 1307 1182 61 0 7 chr13 94761278 94761426 -25522886 + B1_Mus2 SINE Alu 1 147 0 4 1307 614 236 64 147 chr13 94761426 94761555 -25522757 + B4 SINE B4 81 206 -86 4 1307 523 316 85 99 chr13 94761652 94761885 -25522427 + ORR1D2 LTR MaLR 1 243 -127 4 1307 1221 34 0 7 chr13 94761885 94762033 -25522279 + B1_Mm SINE Alu 1 147 0 4 1307 523 316 85 99 chr13 94762033 94762174 -25522138 + ORR1D2 LTR MaLR 244 370 0 4 1307 194 0 0 37 chr13 94762267 94762294 -25522018 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4 1307 287 304 43 43 chr13 94762620 94762737 -25521575 - MLT1H LTR MaLR -388 161 45 4 1307 257 336 36 40 chr13 94763328 94763551 -25520761 + L1MD2 LINE L1 5914 6135 -224 4 1307 301 252 130 14 chr13 94763610 94763790 -25520522 + L1MC4 LINE L1 5694 5907 -2135 4 1307 237 271 34 0 chr13 94764127 94764186 -25520126 - MIRc SINE MIR -144 124 64 4 1307 344 286 0 0 chr13 94764452 94764529 -25519783 - ID4 SINE ID -4 79 3 4 1307 258 105 0 0 chr13 94764666 94764704 -25519608 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 4 1308 962 271 78 109 chr13 94765156 94765541 -25518771 + MTE2a LTR MaLR 6 378 -1 4 1308 366 107 0 0 chr13 94765735 94765791 -25518521 + (CTA)n Simple_repeat Simple_repeat 3 58 0 4 1308 552 251 220 18 chr13 94767712 94767939 -25516373 + B4 SINE B4 2 274 -18 4 1308 23 0 0 0 chr13 94768178 94768201 -25516111 + GC_rich Low_complexity Low_complexity 1 23 0 4 1308 387 0 0 0 chr13 94768887 94768930 -25515382 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 4 1308 630 343 84 45 chr13 94768959 94769399 -25514913 - MLT1D LTR MaLR 0 505 49 4 1308 412 174 11 11 chr13 94769772 94769865 -25514447 + GA-rich Low_complexity Low_complexity 1 93 0 5 1308 357 273 135 11 chr13 94769962 94770147 -25514165 - HAL1-3A_ME LINE L1 -654 2204 1997 5 1308 1076 207 70 0 chr13 94770149 94770449 -25513863 - Lx5 LINE L1 -13 7037 6674 5 1308 558 311 68 86 chr13 94770993 94771710 -25512602 - HAL1 LINE L1 -398 2109 1079 5 1308 575 264 39 16 chr13 94771765 94771892 -25512420 - ID_B1 SINE B4 -5 219 90 5 1308 453 358 45 45 chr13 94771899 94772142 -25512170 - HAL1 LINE L1 -1447 1060 818 5 1308 671 292 127 41 chr13 94772465 94772733 -25511579 + B4 SINE B4 2 292 0 5 1308 239 349 51 40 chr13 94772746 94772922 -25511390 - MLT1A0 LTR MaLR -183 182 5 5 1308 431 253 4 0 chr13 94772945 94773182 -25511130 + (TG)n Simple_repeat Simple_repeat 1 238 0 5 1308 187 310 161 19 chr13 94773906 94774067 -25510245 - MIRb SINE MIR -17 251 68 5 1308 290 374 0 24 chr13 94774147 94774273 -25510039 - L3 LINE CR1 -226 4263 4141 5 1308 307 281 17 26 chr13 94774600 94774717 -25509595 - PB1D10 SINE Alu 0 117 2 5 1308 288 291 54 18 chr13 94775073 94775171 -25509141 - PB1D10 SINE Alu -1 116 17 5 1308 195 42 0 0 chr13 94775171 94775195 -25509117 + (CCA)n Simple_repeat Simple_repeat 2 25 0 5 1308 288 291 54 18 chr13 94775195 94775208 -25509104 - PB1D10 SINE Alu -101 16 2 5 1308 601 283 91 14 chr13 94775282 94775490 -25508822 + MLT2B4 LTR ERVL 32 255 -301 5 1308 647 203 240 11 chr13 94775552 94775731 -25508581 + URR1B DNA MER1_type 3 222 -3 5 1308 198 167 16 32 chr13 94776070 94776132 -25508180 + CT-rich Low_complexity Low_complexity 4 64 0 5 1308 407 315 9 0 chr13 94776269 94776380 -25507932 - PB1D7 SINE Alu -8 112 1 5 1308 477 297 138 48 chr13 94776415 94776531 -25507781 + B3A SINE B2 7 138 -60 5 1308 423 0 0 0 chr13 94776531 94776578 -25507734 + (TA)n Simple_repeat Simple_repeat 2 48 0 5 1308 477 298 128 38 chr13 94776578 94776626 -25507686 + B3A SINE B2 130 186 -9 5 1308 707 331 73 48 chr13 94776682 94777200 -25507112 - L1ME1 LINE L1 -114 6065 5535 5 1308 430 275 18 0 chr13 94777326 94777435 -25506877 + PB1D10 SINE Alu 1 111 -6 5 1308 332 355 68 39 chr13 94777484 94777689 -25506623 + MIR SINE MIR 20 230 -32 5 1308 405 0 0 0 chr13 94777807 94777852 -25506460 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 1308 261 0 0 0 chr13 94777852 94777880 -25506432 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1308 595 300 33 0 chr13 94777893 94778043 -25506269 - B3A SINE B2 -38 160 6 5 1308 545 274 7 22 chr13 94778044 94778182 -25506130 - B1F2 SINE Alu -13 136 1 5 1308 213 211 0 0 chr13 94779118 94779175 -25505137 + CT-rich Low_complexity Low_complexity 3 59 0 5 1308 366 230 5 82 chr13 94780339 94780533 -25503779 + (TA)n Simple_repeat Simple_repeat 2 180 0 5 1308 1190 49 0 0 chr13 94780598 94780741 -25503571 + B1_Mus1 SINE Alu 1 143 -5 5 1308 828 281 87 94 chr13 94782727 94783258 -25501054 - MT2A LTR ERVL -6 527 1 5 1308 200 125 25 0 chr13 94783309 94783349 -25500963 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 5 1308 37158 40 1 16 chr13 94784633 94789789 -25494523 + L1Md_A LINE L1 511 5586 -297 5 1308 8718 27 1 0 chr13 94789790 94790784 -25493528 + L1Md_A LINE L1 5588 6582 0 5 1308 504 225 60 30 chr13 94791055 94791188 -25493124 - B1_Mur1 SINE Alu -1 148 12 5 1308 396 0 0 0 chr13 94791189 94791233 -25493079 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1308 844 120 7 0 chr13 94791961 94792103 -25492209 - URR1B DNA MER1_type 0 225 83 5 1308 543 205 43 43 chr13 94792161 94792324 -25491988 + RSINE1 SINE B4 3 165 0 5 1308 185 274 9 0 chr13 94792333 94792439 -25491873 + (CA)n Simple_repeat Simple_repeat 2 108 0 5 1308 381 248 45 18 chr13 94793065 94793176 -25491136 + PB1D10 SINE Alu 1 114 -3 5 1308 601 292 39 6 chr13 94793197 94793374 -25490938 + MTE2b LTR MaLR 2 184 -195 5 1308 1894 125 128 3 chr13 94793374 94793718 -25490594 + ORR1B1 LTR MaLR 1 387 -7 5 1308 654 118 0 0 chr13 94793734 94793836 -25490476 + (TCTCCC)n Simple_repeat Simple_repeat 2 103 0 5 1308 222 222 0 0 chr13 94793878 94793932 -25490380 + CT-rich Low_complexity Low_complexity 1 54 0 5 1308 490 232 79 79 chr13 94793933 94794061 -25490251 + MTE2b LTR MaLR 202 325 -54 5 1308 378 0 0 0 chr13 94794061 94794103 -25490209 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 5 1308 490 232 79 79 chr13 94794103 94794152 -25490160 + MTE2b LTR MaLR 326 378 -1 5 1308 3329 87 2 40 chr13 94794686 94795180 -25489132 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1308 261 254 99 0 chr13 94796633 94796704 -25487608 - MTE2b LTR MaLR -265 114 37 5 1308 203 171 13 38 chr13 94796714 94796793 -25487519 + (TA)n Simple_repeat Simple_repeat 2 78 0 5 1308 257 349 64 0 chr13 94798027 94798136 -25486176 + PB1D10 SINE Alu 2 117 0 5 1308 886 133 0 20 chr13 94798149 94798295 -25486017 + B1_Mur4 SINE Alu 8 150 0 5 1308 210 105 0 0 chr13 94798295 94798333 -25485979 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 5 1308 246 256 23 47 chr13 94798558 94798644 -25485668 - MIR SINE MIR 0 262 179 5 1308 602 285 66 15 chr13 94798767 94799041 -25485271 - B4 SINE B4 -4 288 1 5 1308 1189 278 67 19 chr13 94799042 94799460 -25484852 - RCHARR1 DNA MER1_type -285 689 252 5 1308 321 232 35 139 chr13 94799919 94800034 -25484278 - B4 SINE B4 -2 290 188 5 1308 942 159 13 0 chr13 94800050 94800207 -25484105 + URR1B DNA MER1_type 1 159 -66 5 1308 302 274 39 46 chr13 94800100 94800230 -25484082 - CYRA11_Mm Unknown Y-chromosome -272 345 217 5 1308 513 265 29 6 chr13 94800243 94800414 -25483898 - B4 SINE B4 -117 175 1 5 1308 698 192 112 6 chr13 94800494 94800672 -25483640 - ID_B1 SINE B4 -3 221 25 5 1308 261 310 203 4 chr13 94801061 94801288 -25483024 + Charlie1a DNA MER1_type 926 1197 -258 5 1308 309 68 0 0 chr13 94801367 94801411 -25482901 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1308 198 0 0 0 chr13 94801411 94801432 -25482880 + (GA)n Simple_repeat Simple_repeat 1 22 0 5 1308 6345 168 74 53 chr13 94801485 94802813 -25481499 - Lx9 LINE L1 0 7644 6290 5 1308 3319 45 28 2 chr13 94802821 94803218 -25481094 + MTB_Mm LTR MaLR 1 407 0 5 1308 2292 196 194 92 chr13 94803349 94803950 -25480362 - Lx9 LINE L1 -1639 6005 5246 5 1308 288 0 0 0 chr13 94803950 94803982 -25480330 + (TG)n Simple_repeat Simple_repeat 1 32 0 5 1308 2292 189 213 105 chr13 94803982 94804054 -25480258 - Lx9 LINE L1 -602 5245 5178 5 1308 2045 186 72 20 chr13 94804054 94804454 -25479858 - MTC LTR MaLR 0 421 1 5 1308 2292 189 213 105 chr13 94804454 94804866 -25479446 - Lx9 LINE L1 -670 5177 4765 5 1308 1054 120 6 6 chr13 94804866 94805042 -25479270 + (TA)n Simple_repeat Simple_repeat 2 177 0 5 1308 798 169 29 0 chr13 94805065 94805201 -25479111 - B1_Mur3 SINE Alu -9 140 1 5 1308 726 293 94 8 chr13 94805242 94805507 -25478805 + B4A SINE B4 1 288 -4 5 1308 405 0 0 0 chr13 94805641 94805686 -25478626 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1308 287 289 1 102 chr13 94805687 94805799 -25478513 - PB1D7 SINE Alu -8 112 10 5 1308 309 337 0 0 chr13 94805890 94805979 -25478333 - BC1_Mm scRNA scRNA -63 89 1 5 1308 433 267 36 22 chr13 94806009 94806147 -25478165 - B1F SINE Alu -8 141 2 5 1308 601 225 162 0 chr13 94806156 94806329 -25477983 - L1MB7 LINE L1 -54 6130 5930 5 1308 423 231 18 114 chr13 94806330 94806349 -25477963 + ID_B1 SINE B4 74 223 -1 5 1308 549 243 27 20 chr13 94806349 94806496 -25477816 + B1F SINE Alu 2 149 0 5 1308 312 286 77 43 chr13 94806530 94806541 -25477771 - B1F SINE Alu -28 121 115 5 1308 1454 205 69 36 chr13 94806541 94806736 -25477576 - ORR1D1 LTR MaLR -2 372 177 5 1308 432 0 0 0 chr13 94806736 94806784 -25477528 + (GA)n Simple_repeat Simple_repeat 2 49 0 5 1308 1454 205 69 36 chr13 94806784 94806948 -25477364 - ORR1D1 LTR MaLR -198 176 1 5 1308 393 250 92 3 chr13 94806948 94807053 -25477259 - B1_Mur2 SINE Alu -35 114 1 5 1308 226 304 108 82 chr13 94807053 94807111 -25477201 - B4 SINE B4 -192 100 39 5 1308 496 320 13 7 chr13 94807192 94807346 -25476966 - B4 SINE B4 -135 157 3 5 1308 412 302 0 0 chr13 94808413 94808529 -25475783 + RSINE1 SINE B4 2 117 -48 5 1308 324 103 0 0 chr13 94808529 94808587 -25475725 + (CAGA)n Simple_repeat Simple_repeat 1 58 0 5 1308 1169 50 0 0 chr13 94808649 94808788 -25475524 + B1_Mus2 SINE Alu 1 139 -8 5 1308 879 143 0 58 chr13 94808848 94809004 -25475308 + B1_Mur2 SINE Alu 1 147 -2 5 1308 464 278 90 0 chr13 94809046 94809190 -25475122 + B3 SINE B2 48 204 -12 5 1308 370 207 41 142 chr13 94809187 94809224 -25475088 + B4A SINE B4 70 221 -71 5 1308 914 40 0 61 chr13 94809224 94809356 -25474956 + B1_Mus1 SINE Alu 19 142 -6 5 1308 225 0 0 0 chr13 94809358 94809383 -25474929 + (GA)n Simple_repeat Simple_repeat 2 26 0 5 1308 240 35 0 0 chr13 94809418 94809447 -25474865 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 5 1308 1302 220 129 49 chr13 94810159 94810585 -25473727 - RLTR28B LTR ERVL -21 460 1 5 1308 1841 125 23 82 chr13 94810912 94811304 -25473008 + RLTR28 LTR ERVL 60 428 -96 5 1308 1456 79 5 0 chr13 94811304 94811493 -25472819 - B2_Mm1t SINE B2 -1 192 3 5 1308 511 264 68 94 chr13 94811495 94811876 -25472436 - L1M4 LINE L1 -839 5307 4937 5 1308 4621 76 7 0 chr13 94811876 94812456 -25471856 + MT2B2 LTR ERVL 1 584 0 5 1308 36843 106 31 14 chr13 94812456 94817724 -25466588 + MERVL-int LTR ERVL 1 5353 -132 5 1308 320 157 55 41 chr13 94817849 94817922 -25466390 + ORR1A3-int LTR MaLR 567 640 -1323 5 1308 267 56 0 0 chr13 94817924 94817960 -25466352 + MERVL-int LTR ERVL 5450 5485 0 5 1308 4354 79 23 0 chr13 94817962 94818531 -25465781 + MT2B2 LTR ERVL 3 584 0 5 1308 307 271 24 17 chr13 94818557 94818690 -25465622 - L1M4 LINE L1 -1232 4914 4778 5 1308 292 241 25 0 chr13 94819094 94819173 -25465139 + RMER15 LTR ERVL 405 485 -90 5 1308 549 206 56 0 chr13 94819346 94819453 -25464859 + PB1D9 SINE Alu 3 115 -5 5 1308 21 0 0 0 chr13 94819532 94819553 -25464759 + AT_rich Low_complexity Low_complexity 1 21 0 5 1308 251 0 0 56 chr13 94819750 94819786 -25464526 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1308 559 186 0 0 chr13 94820790 94820887 -25463425 + RMER1B Other Other 822 918 -148 5 1308 357 161 0 0 chr13 94820880 94820936 -25463376 + RMER1B Other Other 863 918 -148 5 1308 340 179 0 0 chr13 94820929 94820985 -25463327 + RMER1B Other Other 863 918 -148 5 1308 364 161 0 0 chr13 94820978 94821034 -25463278 + RMER1B Other Other 863 918 -148 5 1308 1182 130 0 78 chr13 94821027 94821244 -25463068 + RMER1B Other Other 863 1062 -4 5 1308 528 30 0 0 chr13 94821710 94821776 -25462536 + (CA)n Simple_repeat Simple_repeat 1 66 0 6 1308 273 109 47 0 chr13 94822122 94822186 -25462126 + (TA)n Simple_repeat Simple_repeat 2 68 0 6 1308 1291 20 0 0 chr13 94823970 94824116 -25460196 + B1_Mm SINE Alu 2 147 0 6 1308 360 31 15 59 chr13 94824116 94824184 -25460128 + (CAAAA)n Simple_repeat Simple_repeat 4 68 0 6 1308 189 0 0 0 chr13 94824713 94824734 -25459578 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1308 234 322 83 39 chr13 94826204 94826385 -25457927 + Tigger9a DNA Tigger 495 683 -49 6 1308 250 200 12 62 chr13 94827664 94827744 -25456568 + C-rich Low_complexity Low_complexity 6 81 0 6 1308 306 100 37 0 chr13 94829388 94829459 -25454853 + B3A SINE B2 1 77 -139 6 1308 716 254 5 44 chr13 94829668 94829874 -25454438 + B3A SINE B2 1 198 0 6 1308 318 213 8 100 chr13 94829935 94830055 -25454257 + B3A SINE B2 90 198 0 6 1308 27 0 0 0 chr13 94830055 94830082 -25454230 + AT_rich Low_complexity Low_complexity 1 27 0 6 1308 306 0 0 0 chr13 94830608 94830642 -25453670 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1308 354 45 0 0 chr13 94831262 94831306 -25453006 + (TCCA)n Simple_repeat Simple_repeat 3 46 0 6 1308 282 56 0 0 chr13 94831812 94831848 -25452464 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1308 360 0 0 0 chr13 94832524 94832564 -25451748 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1308 1089 58 127 12 chr13 94835138 94835311 -25449001 - B2_Mm2 SINE B2 -1 194 2 6 1308 294 29 0 0 chr13 94835591 94835626 -25448686 + (TGG)n Simple_repeat Simple_repeat 2 36 0 6 1308 718 260 14 0 chr13 94837529 94837675 -25446637 + B3A SINE B2 3 150 -48 6 1308 253 321 12 12 chr13 94838391 94838476 -25445836 - B3 SINE B2 -131 85 1 6 1308 207 0 0 0 chr13 94838484 94838507 -25445805 + (T)n Simple_repeat Simple_repeat 1 23 0 6 1308 228 337 94 24 chr13 94840272 94840442 -25443870 - Tigger16a DNA Tigger -673 260 79 6 1308 247 236 97 0 chr13 94841543 94841615 -25442697 + MTEa LTR MaLR 288 366 -13 6 1308 192 40 0 0 chr13 94844069 94844094 -25440218 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1308 297 248 118 10 chr13 94844336 94844438 -25439874 - MER20 DNA MER1_type -2 217 105 6 1308 741 61 0 0 chr13 94844728 94844827 -25439485 + (TCCC)n Simple_repeat Simple_repeat 1 99 0 6 1308 713 255 39 0 chr13 94844833 94844986 -25439326 - ID_B1 SINE B4 -29 195 37 6 1308 581 335 0 31 chr13 94846125 94846288 -25438024 + RSINE1 SINE B4 8 165 0 6 1308 320 295 69 69 chr13 94846288 94846314 -25437998 + B2_Mm2 SINE B2 7 195 0 6 1308 22 0 0 0 chr13 94847609 94847631 -25436681 + AT_rich Low_complexity Low_complexity 1 22 0 6 1308 473 115 13 0 chr13 94848076 94848154 -25436158 + (TA)n Simple_repeat Simple_repeat 2 80 0 6 1308 536 308 31 37 chr13 94848154 94848307 -25436005 - RSINE1 SINE B4 -7 158 5 6 1308 227 314 45 34 chr13 94848306 94848395 -25435917 - PB1D10 SINE Alu -26 91 2 6 1308 534 131 0 23 chr13 94849354 94849440 -25434872 + ORR1A4 LTR MaLR 93 176 -153 6 1308 487 173 0 48 chr13 94849431 94849534 -25434778 - MT2B LTR ERVL -291 310 213 6 1308 2672 127 123 11 chr13 94849535 94849990 -25434322 - ORR1B1-int LTR MaLR -1457 506 1 6 1308 1676 136 77 108 chr13 94849994 94850356 -25433956 - ORR1B1 LTR MaLR -8 386 36 6 1308 2899 9 3 0 chr13 94850501 94850822 -25433490 - RLTRETN_Mm LTR ERVK 0 322 1 6 1308 8620 28 3 1 chr13 94850822 94851800 -25432512 - MMETn-int LTR ERVK 0 4844 3865 6 1308 298 301 122 83 chr13 94852283 94852439 -25431873 + RSINE1 SINE B4 3 164 -1 6 1308 270 0 0 0 chr13 94853877 94853907 -25430405 + (TG)n Simple_repeat Simple_repeat 1 30 0 6 1308 297 286 107 0 chr13 94854742 94854826 -25429486 - Charlie18a DNA MER1_type -4 338 246 6 1308 309 26 0 0 chr13 94855850 94855888 -25428424 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1308 609 214 64 48 chr13 94855991 94856178 -25428134 - B2_Mm2 SINE B2 -5 190 1 6 1308 242 315 31 63 chr13 94857089 94857248 -25427064 + MIRb SINE MIR 107 260 -8 6 1308 597 204 102 64 chr13 94857683 94857884 -25426428 + B3A SINE B2 1 213 -3 6 1308 422 50 0 32 chr13 94858150 94858212 -25426100 + (TTTC)n Simple_repeat Simple_repeat 1 60 0 6 1308 1494 59 38 0 chr13 94858212 94858398 -25425914 - B2_Mm2 SINE B2 -1 194 2 6 1308 513 216 74 7 chr13 94858480 94858615 -25425697 - B3 SINE B2 0 216 73 6 1308 469 269 0 42 chr13 94860535 94860655 -25423657 - PB1 SINE Alu -2 125 11 6 1308 369 0 0 0 chr13 94861297 94861338 -25422974 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 1308 183 276 38 50 chr13 94861559 94861639 -25422673 + MER5B DNA MER1_type 95 173 -5 6 1308 294 29 0 0 chr13 94863700 94863735 -25420577 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1308 651 246 133 48 chr13 94863802 94864050 -25420262 - B4A SINE B4 0 292 24 6 1308 272 87 28 42 chr13 94865167 94865239 -25419073 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 6 1308 1171 181 95 0 chr13 94865413 94865656 -25418656 - RLTR11A2 LTR ERVK 0 527 262 6 1308 516 16 0 0 chr13 94865672 94865733 -25418579 + (CTG)n Simple_repeat Simple_repeat 1 61 0 6 1308 804 96 0 0 chr13 94865733 94865848 -25418464 + (TTC)n Simple_repeat Simple_repeat 1 115 0 6 1308 1265 78 6 0 chr13 94865859 94866038 -25418274 + (TTC)n Simple_repeat Simple_repeat 1 180 0 6 1308 682 156 15 0 chr13 94866039 94866174 -25418138 + CT-rich Low_complexity Low_complexity 1 137 0 6 1308 997 160 133 48 chr13 94866174 94866463 -25417849 - RLTR11A2 LTR ERVK -163 278 1 6 1308 221 180 20 0 chr13 94866539 94866589 -25417723 + CT-rich Low_complexity Low_complexity 1 51 0 6 1308 341 254 0 0 chr13 94866591 94866662 -25417650 - PB1D10 SINE Alu -21 96 26 6 1308 190 277 93 35 chr13 94869100 94869186 -25415126 + MIRc SINE MIR 12 102 -166 6 1308 183 318 63 0 chr13 94869628 94869691 -25414621 - MIR SINE MIR -144 118 52 6 1308 243 277 115 9 chr13 94871737 94871886 -25412426 + MIRb SINE MIR 73 246 -22 6 1308 324 0 0 0 chr13 94872400 94872436 -25411876 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1308 668 243 50 0 chr13 94872441 94872581 -25411731 - RSINE1 SINE B4 -17 148 2 6 1308 788 279 49 0 chr13 94872641 94872824 -25411488 - ID_B1 SINE B4 -21 203 12 6 1308 262 296 19 67 chr13 94873288 94873393 -25410919 + RSINE1 SINE B4 26 125 -40 6 1308 268 239 117 58 chr13 94873473 94873492 -25410820 - B4 SINE B4 -72 220 94 6 1308 375 190 119 10 chr13 94873492 94873593 -25410719 - PB1D9 SINE Alu 0 120 9 6 1308 216 0 0 0 chr13 94875317 94875341 -25408971 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1308 474 18 0 0 chr13 94875341 94875395 -25408917 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 1308 350 290 21 0 chr13 94875395 94875488 -25408824 - B4A SINE B4 -195 97 3 6 1308 23 0 0 0 chr13 94875509 94875532 -25408780 + AT_rich Low_complexity Low_complexity 1 23 0 6 1308 1089 222 0 33 chr13 94877439 94877649 -25406663 - B3 SINE B2 -7 209 7 6 1308 304 293 30 10 chr13 94877658 94877758 -25406554 - PB1D10 SINE Alu -1 116 15 6 1308 231 267 67 0 chr13 94877961 94878051 -25406261 - PB1 SINE Alu -27 100 5 6 1308 262 387 0 0 chr13 94878486 94878592 -25405720 - PB1D10 SINE Alu -10 107 2 6 1308 361 341 75 38 chr13 94879078 94879343 -25404969 + MamSINE1 SINE tRNA 2 276 -14 6 1308 357 43 0 0 chr13 94879554 94879601 -25404711 + (TTG)n Simple_repeat Simple_repeat 2 48 0 6 1308 1203 49 0 0 chr13 94879601 94879743 -25404569 - B1_Mus1 SINE Alu -6 142 1 6 1308 35 0 0 0 chr13 94879817 94879852 -25404460 + AT_rich Low_complexity Low_complexity 1 35 0 6 1308 1098 202 9 14 chr13 94879852 94880063 -25404249 - B3 SINE B2 -5 211 2 6 1308 3072 121 85 42 chr13 94881701 94882252 -25402060 + RMER15 LTR ERVL 1 575 0 6 1308 806 253 18 9 chr13 94882742 94882961 -25401351 - ID_B1 SINE B4 -3 221 1 6 1308 735 232 183 17 chr13 94883692 94883933 -25400379 - B4A SINE B4 -10 282 2 6 1308 22 0 0 0 chr13 94885120 94885142 -25399170 + AT_rich Low_complexity Low_complexity 1 22 0 6 1308 471 286 18 0 chr13 94886191 94886303 -25398009 + B4A SINE B4 3 116 -176 6 1308 519 122 0 0 chr13 94886442 94886532 -25397780 + (CA)n Simple_repeat Simple_repeat 1 90 0 6 1308 199 281 47 0 chr13 94886901 94886965 -25397347 - L3 LINE CR1 -175 4314 4248 6 1308 737 262 32 16 chr13 94888127 94888317 -25395995 + B3A SINE B2 1 193 -5 6 1308 362 21 0 21 chr13 94888380 94888428 -25395884 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1308 763 240 70 5 chr13 94889167 94889368 -25394944 - B3 SINE B2 0 216 3 6 1308 410 297 17 8 chr13 94890839 94890958 -25393354 - PB1D7 SINE Alu 0 120 1 6 1308 1575 193 123 0 chr13 94891025 94891357 -25392955 - ORR1D1 LTR MaLR 0 374 2 6 1308 492 279 107 6 chr13 94892359 94892518 -25391794 + ID_B1 SINE B4 43 217 -7 6 1308 303 273 23 0 chr13 94892518 94892606 -25391706 + (CATATA)n Simple_repeat Simple_repeat 3 92 0 6 1308 336 102 0 0 chr13 94892608 94892657 -25391655 + (TATG)n Simple_repeat Simple_repeat 2 50 0 6 1308 189 0 0 0 chr13 94893808 94893829 -25390483 + (CTCTG)n Simple_repeat Simple_repeat 3 23 0 6 1308 1223 34 0 20 chr13 94894196 94894345 -25389967 + B1_Mus2 SINE Alu 2 147 0 6 1308 206 32 32 0 chr13 94894354 94894385 -25389927 + (TAA)n Simple_repeat Simple_repeat 2 33 0 6 1308 302 288 101 8 chr13 94894587 94894706 -25389606 + Charlie5 DNA MER1_type 3 132 -2492 6 1308 370 262 0 0 chr13 94894710 94894790 -25389522 + Charlie5 DNA MER1_type 2244 2323 -301 6 1308 456 307 0 32 chr13 94895125 94895280 -25389032 - B3 SINE B2 0 216 67 6 1309 636 224 71 71 chr13 94897197 94897394 -25386918 - B3A SINE B2 0 198 2 6 1309 2047 155 87 10 chr13 94897426 94897817 -25386495 + MTC LTR MaLR 1 421 0 6 1309 216 0 0 0 chr13 94899100 94899124 -25385188 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 7 1309 730 302 36 73 chr13 94899353 94899656 -25384656 - B4A SINE B4 0 292 1 7 1309 657 302 0 67 chr13 94901651 94901846 -25382466 - B3A SINE B2 -16 182 1 7 1309 261 247 13 13 chr13 94902273 94902351 -25381961 + ID4 SINE ID 5 82 -1 7 1309 1226 29 0 0 chr13 94904047 94904185 -25380127 - B1_Mm SINE Alu -9 138 1 7 1309 21 0 0 0 chr13 94904543 94904564 -25379748 + AT_rich Low_complexity Low_complexity 1 21 0 7 1309 189 0 0 0 chr13 94905697 94905718 -25378594 + (GA)n Simple_repeat Simple_repeat 1 21 0 7 1309 320 268 17 67 chr13 94906189 94906309 -25378003 + Charlie15a DNA MER1_type 109 222 -2 7 1309 1021 273 104 63 chr13 94906857 94907384 -25376928 - Lx8 LINE L1 -2 7471 6923 7 1309 291 241 103 34 chr13 94907427 94907573 -25376739 - Lx7 LINE L1 -12 7684 7529 7 1309 1177 286 95 22 chr13 94907555 94907580 -25376732 - Lx7 LINE L1 -361 7335 7313 7 1309 189 74 0 0 chr13 94907580 94907607 -25376705 + (CAA)n Simple_repeat Simple_repeat 2 28 0 7 1309 1177 286 95 22 chr13 94907607 94908074 -25376238 - Lx7 LINE L1 -384 7312 6807 7 1309 1313 239 204 22 chr13 94908081 94908253 -25376059 + L1_Mur3 LINE L1 5033 5225 -655 7 1309 1145 155 130 0 chr13 94908253 94908453 -25375859 + URR1A DNA MER1_type 1 226 0 7 1309 1313 239 204 22 chr13 94908453 94908824 -25375488 + L1_Mur3 LINE L1 5226 5675 -205 7 1309 222 37 0 0 chr13 94910000 94910027 -25374285 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 7 1309 269 270 0 0 chr13 94910027 94910090 -25374222 + CT-rich Low_complexity Low_complexity 1 63 0 7 1309 198 143 0 0 chr13 94911107 94911142 -25373170 + (CCTG)n Simple_repeat Simple_repeat 3 37 0 7 1309 186 43 0 0 chr13 94912484 94912507 -25371805 + (CA)n Simple_repeat Simple_repeat 2 24 0 7 1309 254 310 14 0 chr13 94912616 94912687 -25371625 - ID4 SINE ID -9 74 3 7 1309 703 194 110 70 chr13 94913636 94913758 -25370554 - ORR1D1 LTR MaLR -8 366 230 7 1309 306 0 0 0 chr13 94913758 94913792 -25370520 + (CAGG)n Simple_repeat Simple_repeat 3 36 0 7 1309 703 194 110 70 chr13 94913792 94913896 -25370416 - ORR1D1 LTR MaLR -145 229 133 7 1309 21 0 0 0 chr13 94914658 94914679 -25369633 + AT_rich Low_complexity Low_complexity 1 21 0 7 1309 270 0 0 0 chr13 94915102 94915132 -25369180 + (TC)n Simple_repeat Simple_repeat 2 31 0 7 1309 1269 98 11 0 chr13 94915136 94915310 -25369002 - B2_Mm1t SINE B2 -14 179 4 7 1309 389 260 0 13 chr13 94915356 94915434 -25368878 + ID4_ SINE ID 7 83 0 7 1309 189 169 0 48 chr13 94915435 94915497 -25368815 + (TAAA)n Simple_repeat Simple_repeat 2 60 0 7 1309 435 222 93 8 chr13 94915510 94915628 -25368684 - MLT1A1 LTR MaLR -52 356 229 7 1309 2440 173 45 12 chr13 94915697 94916123 -25368189 - Lx5 LINE L1 0 7050 6611 7 1309 386 225 146 0 chr13 94916223 94916312 -25368000 - U6 snRNA snRNA -5 102 1 7 1309 317 292 188 57 chr13 94916620 94916849 -25367463 - Charlie8 DNA MER1_type -2096 332 74 7 1309 360 0 0 0 chr13 94917003 94917043 -25367269 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1309 253 320 27 0 chr13 94917199 94917274 -25367038 - B4 SINE B4 -214 78 2 7 1309 734 312 12 41 chr13 94923161 94923405 -25360907 - MER44D DNA MER2_type -17 688 453 7 1309 484 302 210 0 chr13 94923409 94923571 -25360741 - MER44D DNA MER2_type -471 234 39 7 1309 471 254 8 56 chr13 94924329 94924454 -25359858 - PB1D9 SINE Alu 0 120 2 7 1309 937 141 175 10 chr13 94926930 94927124 -25357188 - URR1A DNA MER1_type 0 226 1 7 1309 180 0 0 0 chr13 94927225 94927245 -25357067 + (TTG)n Simple_repeat Simple_repeat 1 20 0 7 1309 207 100 0 0 chr13 94927483 94927513 -25356799 + (G)n Simple_repeat Simple_repeat 1 30 0 7 1309 431 291 81 38 chr13 94928087 94928298 -25356014 - MIR SINE MIR -27 235 16 7 1309 275 328 101 14 chr13 94928378 94928517 -25355795 + MER20 DNA MER1_type 63 213 -6 7 1309 217 263 47 33 chr13 94931595 94931698 -25352614 - MIRc SINE MIR -158 110 2 7 1309 201 370 15 38 chr13 94931882 94932014 -25352298 - MIR SINE MIR -63 145 17 7 1309 216 331 149 11 chr13 94932184 94932358 -25351954 - MIR SINE MIR -33 229 32 7 1309 712 210 22 0 chr13 94932618 94932756 -25351556 - MTD LTR MaLR 0 419 279 7 1309 198 0 0 0 chr13 94932775 94932797 -25351515 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1309 494 16 16 0 chr13 94932848 94932910 -25351402 - B1_Mus1 SINE Alu -85 63 1 7 1309 752 260 8 85 chr13 94932910 94933119 -25351193 - MTD LTR MaLR -214 205 16 7 1309 207 100 0 0 chr13 94933130 94933160 -25351152 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 1309 796 92 105 23 chr13 94934850 94934983 -25349329 - B1_Mus1 SINE Alu 0 148 5 7 1309 3065 32 0 0 chr13 94935303 94935649 -25348663 - ORR1A0 LTR MaLR 0 346 1 7 1309 283 321 25 0 chr13 94937323 94937404 -25346908 - PB1D10 SINE Alu -33 84 2 7 1309 1238 68 0 0 chr13 94937582 94937730 -25346582 - B1_Mus1 SINE Alu 0 148 1 7 1309 255 321 116 120 chr13 94937886 94938102 -25346210 - MER20 DNA MER1_type 0 219 5 7 1309 189 289 22 0 chr13 94939362 94939407 -25344905 - MIRb SINE MIR -8 260 215 7 1309 183 348 79 63 chr13 94939482 94939608 -25344704 - MIR SINE MIR -75 187 60 7 1309 313 313 51 55 chr13 94940581 94940855 -25343457 + L1MC4 LINE L1 7770 8042 0 7 1309 208 222 0 0 chr13 94943886 94943940 -25340372 + (CGGGG)n Simple_repeat Simple_repeat 5 58 0 7 1309 288 53 0 0 chr13 94945653 94945691 -25338621 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 7 1309 207 0 0 0 chr13 94945738 94945761 -25338551 + (GA)n Simple_repeat Simple_repeat 1 23 0 7 1309 228 35 0 0 chr13 94946140 94946169 -25338143 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1309 346 253 0 13 chr13 94946520 94946596 -25337716 - B1F SINE Alu -73 76 2 7 1309 22 0 0 0 chr13 94947502 94947524 -25336788 + AT_rich Low_complexity Low_complexity 1 22 0 7 1309 494 187 0 21 chr13 94947559 94947652 -25336660 + PB1D10 SINE Alu 24 114 -3 7 1309 352 354 103 42 chr13 94949817 94949982 -25334330 + B3A SINE B2 22 196 -2 7 1309 653 248 76 15 chr13 94950987 94951184 -25333128 - B3 SINE B2 -6 210 2 7 1309 2777 72 72 0 chr13 94951546 94951919 -25332393 + MTB LTR MaLR 1 400 0 7 1309 273 57 0 0 chr13 94953318 94953353 -25330959 + (CA)n Simple_repeat Simple_repeat 1 35 0 7 1309 339 366 62 5 chr13 94953907 94954102 -25330210 - L2a LINE L2 0 3426 3221 7 1309 492 62 0 0 chr13 94955528 94955592 -25328720 + (TCCC)n Simple_repeat Simple_repeat 3 66 0 7 1309 257 294 141 0 chr13 94956747 94956832 -25327480 - PB1D9 SINE Alu -22 98 2 7 1309 457 279 113 4 chr13 94957075 94957305 -25327007 - L1M2 LINE L1 -660 5640 5386 7 1309 1484 157 76 51 chr13 94957329 94957724 -25326588 - RMER17C LTR ERVK -5 405 1 7 1309 362 229 293 18 chr13 94957724 94957946 -25326366 - B4A SINE B4 -9 283 1 7 1309 388 270 199 48 chr13 94957995 94958306 -25326006 - L1M2 LINE L1 -630 5217 4860 7 1309 324 252 45 38 chr13 94958395 94958527 -25325785 - L1M2 LINE L1 -1424 4716 4584 7 1309 596 208 126 0 chr13 94958624 94958783 -25325529 - RMER12 LTR ERVK -62 1260 1082 7 1309 486 151 164 26 chr13 94958808 94958924 -25325388 - RMER12B LTR ERVK -196 1208 1077 7 1309 2565 199 96 21 chr13 94958935 94959495 -25324817 - RMER12B LTR ERVK -711 693 92 7 1309 524 255 238 31 chr13 94959515 94959671 -25324641 - L1M2 LINE L1 -1983 4160 3987 7 1309 1387 76 38 0 chr13 94959671 94959856 -25324456 - B2_Mm2 SINE B2 -3 192 1 7 1309 524 255 238 31 chr13 94959856 94960123 -25324189 - L1M2 LINE L1 -2157 3986 3649 7 1309 501 223 137 32 chr13 94961289 94961479 -25322833 - B3 SINE B2 -6 210 1 7 1309 181 208 189 0 chr13 94965789 94965842 -25318470 - L3 LINE CR1 -2251 2238 2176 7 1309 523 290 230 9 chr13 94966024 94966250 -25318062 - B4 SINE B4 -16 276 1 7 1309 1194 55 0 20 chr13 94967323 94967472 -25316840 + B1_Mus2 SINE Alu 1 146 -1 7 1309 228 313 79 67 chr13 94967606 94967784 -25316528 + MIR SINE MIR 35 214 -48 7 1309 28 0 0 0 chr13 94967852 94967880 -25316432 + AT_rich Low_complexity Low_complexity 1 28 0 7 1309 737 142 25 0 chr13 94967880 94968000 -25316312 - B1_Mur2 SINE Alu 0 149 27 7 1309 22 0 0 0 chr13 94968348 94968370 -25315942 + AT_rich Low_complexity Low_complexity 1 22 0 7 1309 29 0 0 0 chr13 94968553 94968582 -25315730 + AT_rich Low_complexity Low_complexity 1 29 0 7 1309 231 280 42 70 chr13 94969064 94969206 -25315106 + L1ME4a LINE L1 5963 6100 -24 7 1309 778 182 27 59 chr13 94969241 94969428 -25314884 - B2_Mm2 SINE B2 -14 181 1 7 1309 549 0 0 0 chr13 94970150 94970211 -25314101 + (TG)n Simple_repeat Simple_repeat 1 61 0 7 1309 198 0 0 0 chr13 94972962 94972984 -25311328 + (TC)n Simple_repeat Simple_repeat 1 22 0 7 1309 333 62 0 0 chr13 94972984 94973031 -25311281 + (CA)n Simple_repeat Simple_repeat 1 48 0 7 1309 676 46 46 0 chr13 94975202 94975311 -25309001 + (GA)n Simple_repeat Simple_repeat 1 114 0 7 1309 25 31 0 0 chr13 94975447 94975479 -25308833 + AT_rich Low_complexity Low_complexity 1 32 0 7 1309 575 228 74 0 chr13 94976226 94976375 -25307937 - RSINE1 SINE B4 -4 161 2 7 1309 255 253 84 42 chr13 94976876 94976971 -25307341 + PB1 SINE Alu 6 104 -23 7 1309 204 97 0 0 chr13 94977662 94977693 -25306619 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 7 1309 1166 68 0 7 chr13 94977695 94977842 -25306470 - B1_Mm SINE Alu 0 147 2 7 1309 273 222 0 0 chr13 94978492 94978555 -25305757 + (CA)n Simple_repeat Simple_repeat 1 63 0 7 1309 1166 278 86 40 chr13 94978555 94978923 -25305389 + L1MD1 LINE L1 5450 5821 -421 7 1309 978 202 38 19 chr13 94978923 94979135 -25305177 + B3 SINE B2 1 216 0 7 1309 1166 278 86 40 chr13 94979135 94979362 -25304950 + L1MD1 LINE L1 5822 6072 -170 7 1309 338 252 134 0 chr13 94979359 94979478 -25304834 + L1MD1 LINE L1 6198 6332 -27 7 1309 351 0 0 0 chr13 94979640 94979679 -25304633 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1309 657 85 0 0 chr13 94980679 94980785 -25303527 + (CA)n Simple_repeat Simple_repeat 2 107 0 7 1309 838 215 134 0 chr13 94980952 94981138 -25303174 - B3 SINE B2 -5 211 1 7 1309 620 285 137 0 chr13 94981464 94981720 -25302592 - L1M4 LINE L1 -439 5740 5450 7 1309 234 202 128 26 chr13 94981908 94982025 -25302287 + ORR1E LTR MaLR 100 228 -131 7 1309 288 229 87 130 chr13 94982132 94982457 -25301855 - L1M4 LINE L1 -751 5428 5121 7 1309 212 77 26 0 chr13 94982599 94982638 -25301674 + (CAAAAA)n Simple_repeat Simple_repeat 6 45 0 8 1309 552 232 104 14 chr13 94982774 94982918 -25301394 + B3 SINE B2 32 188 -28 8 1309 297 328 70 66 chr13 94983021 94983292 -25301020 - L1M4 LINE L1 -1376 4770 4499 7 1309 331 211 158 0 chr13 94983292 94983387 -25300925 - L1MD LINE L1 -1907 4239 4130 8 1309 317 365 27 45 chr13 94983398 94983622 -25300690 - L1M4 LINE L1 -2068 4078 3859 7 1309 429 257 48 0 chr13 94983655 94983760 -25300552 + PB1D10 SINE Alu 7 116 -1 8 1309 4529 14 0 0 chr13 94984566 94985059 -25299253 - MT2_Mm LTR ERVL 0 493 1 8 1309 319 0 0 0 chr13 94985059 94985097 -25299215 - MERVL-int LTR ERVL 0 5485 5448 8 1309 412 123 13 40 chr13 94985097 94985173 -25299139 - ORR1A3-int LTR MaLR -1323 640 567 8 1309 41648 15 14 0 chr13 94985173 94990471 -25293841 - MERVL-int LTR ERVL -114 5371 1 8 1309 4529 14 0 0 chr13 94990471 94990964 -25293348 - MT2_Mm LTR ERVL 0 493 1 8 1309 1321 20 0 0 chr13 94991109 94991256 -25293056 - B1_Mus1 SINE Alu -1 147 1 8 1309 257 305 93 23 chr13 94992809 94993024 -25291288 - HAL1 LINE L1 -389 2118 1889 8 1309 250 250 47 0 chr13 94993100 94993164 -25291148 - HAL1 LINE L1 -954 1553 1487 8 1309 236 307 20 10 chr13 94993505 94993607 -25290705 + L1MC LINE L1 3886 3988 -2158 8 1309 1147 62 0 14 chr13 94994235 94994381 -25289931 - B1_Mus1 SINE Alu 0 148 5 8 1309 635 232 58 0 chr13 94994480 94994618 -25289694 - RSINE1 SINE B4 -19 146 1 8 1309 260 244 200 0 chr13 94994698 94994788 -25289524 - PB1D7 SINE Alu -4 116 9 8 1309 414 0 0 0 chr13 94994792 94994838 -25289474 + (CACG)n Simple_repeat Simple_repeat 2 47 0 8 1309 783 245 75 0 chr13 94995652 94995852 -25288460 - B3 SINE B2 -1 215 1 8 1309 243 0 0 0 chr13 94996114 94996141 -25288171 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 8 1309 816 87 50 3 chr13 94996157 94996289 -25288023 - B1_Mm SINE Alu 0 147 26 8 1309 1235 34 7 0 chr13 94996408 94996555 -25287757 + B1_Mus1 SINE Alu 1 148 0 8 1309 213 39 0 0 chr13 94997771 94997797 -25286515 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 8 1309 652 247 13 20 chr13 94998369 94998506 -25285806 + B1_Mur3 SINE Alu 1 139 -10 8 1309 216 0 0 0 chr13 94998506 94998530 -25285782 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 1309 652 247 13 20 chr13 94998530 94998541 -25285771 + B1_Mur3 SINE Alu 140 148 -1 8 1309 183 184 0 0 chr13 95000523 95000561 -25283751 + CT-rich Low_complexity Low_complexity 2 39 0 1 1309 857 66 32 2 chr13 95000574 95000711 -25283601 - B1_Mur4 SINE Alu -2 148 9 2 1309 302 215 77 0 chr13 95000852 95000917 -25283395 + ID4 SINE ID 1 70 -13 3 1309 316 195 191 22 chr13 95002414 95002503 -25281809 + B3A SINE B2 16 119 -79 4 1309 225 0 0 0 chr13 95003503 95003528 -25280784 + (CAGA)n Simple_repeat Simple_repeat 2 26 0 5 1309 1247 48 0 0 chr13 95004088 95004234 -25280078 + B1_Mm SINE Alu 2 147 0 6 1309 396 117 0 0 chr13 95004234 95004311 -25280001 + (A)n Simple_repeat Simple_repeat 1 77 0 7 1309 272 370 64 14 chr13 95004328 95004468 -25279844 + B1F SINE Alu 3 149 0 8 1309 527 247 55 17 chr13 95004973 95005154 -25279158 - B3 SINE B2 -27 189 2 9 1309 1255 38 0 0 chr13 95005843 95006002 -25278310 + B2_Mm1a SINE B2 2 160 -33 1 1309 368 52 35 0 chr13 95006002 95006060 -25278252 + (TAAA)n Simple_repeat Simple_repeat 3 62 0 1 1309 672 256 63 0 chr13 95006608 95006799 -25277513 + Lx8 LINE L1 6376 6578 -895 1 1309 1255 34 0 0 chr13 95007986 95008133 -25276179 + B1_Mus2 SINE Alu 1 147 0 1 1309 183 42 0 0 chr13 95008136 95008160 -25276152 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1309 739 135 46 38 chr13 95008201 95008332 -25275980 + B1_Mus1 SINE Alu 1 132 -16 1 1309 302 282 28 87 chr13 95008349 95008477 -25275835 + B3 SINE B2 70 196 -2 1 1309 284 264 141 14 chr13 95008478 95008620 -25275692 + L1MCa LINE L1 1515 1674 -4834 1 1309 462 211 186 9 chr13 95008955 95009170 -25275142 + L1MCa LINE L1 2130 2382 -4126 1 1309 333 0 0 0 chr13 95009733 95009770 -25274542 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1309 240 264 111 39 chr13 95009901 95010082 -25274230 + L1M3 LINE L1 3096 3289 -2851 1 1309 230 81 27 0 chr13 95010353 95010390 -25273922 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 2 1309 1216 55 0 0 chr13 95010390 95010536 -25273776 - B1_Mus2 SINE Alu 0 147 2 2 1309 237 210 31 0 chr13 95010543 95010607 -25273705 - PB1 SINE Alu -2 125 53 2 1309 419 190 218 0 chr13 95010803 95010945 -25273367 - MTC LTR MaLR -17 404 232 2 1309 282 294 50 121 chr13 95011000 95011182 -25273130 + B3A SINE B2 48 216 0 2 1309 219 65 65 0 chr13 95011182 95011228 -25273084 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1309 409 130 90 36 chr13 95011270 95011483 -25272829 + (CACAA)n Simple_repeat Simple_repeat 1 224 0 2 1309 756 287 75 30 chr13 95011511 95011939 -25272373 + L1M3 LINE L1 3678 4124 -2016 1 1309 461 211 71 53 chr13 95012176 95012346 -25271966 + L1MA7 LINE L1 5874 6046 -245 2 1309 827 275 129 61 chr13 95012552 95013244 -25271068 + L1MC1 LINE L1 5595 6333 0 2 1309 606 75 0 0 chr13 95013335 95013428 -25270884 + (CA)n Simple_repeat Simple_repeat 2 94 0 2 1309 796 135 41 34 chr13 95013494 95013640 -25270672 - B1_Mus1 SINE Alu 0 148 2 3 1309 221 347 14 0 chr13 95014468 95014540 -25269772 + ID4_ SINE ID 9 81 -2 3 1309 638 333 35 75 chr13 95014998 95015371 -25268941 + MLT1A0 LTR MaLR 3 360 -5 3 1309 329 287 52 152 chr13 95016103 95016170 -25268142 + MLT1E1A LTR MaLR 461 518 -162 3 1309 799 225 36 10 chr13 95016170 95016363 -25267949 + B3A SINE B2 1 198 0 3 1309 329 287 52 152 chr13 95016363 95016505 -25267807 + MLT1E1A LTR MaLR 519 649 -31 3 1309 267 102 0 75 chr13 95018007 95018060 -25266252 - MER33 DNA MER1_type -233 91 43 3 1309 561 77 66 0 chr13 95018233 95018324 -25265988 - Lx9 LINE L1 -9 7635 7539 3 1309 281 206 67 27 chr13 95018327 95018402 -25265910 + MTC LTR MaLR 2 79 -342 3 1309 667 154 113 23 chr13 95018402 95018535 -25265777 + B1_Mur4 SINE Alu 1 145 -5 3 1309 225 0 0 0 chr13 95018540 95018565 -25265747 + (ATTG)n Simple_repeat Simple_repeat 3 27 0 3 1309 240 200 0 0 chr13 95018573 95018643 -25265669 + GA-rich Low_complexity Low_complexity 1 70 0 4 1309 1567 194 61 21 chr13 95018647 95018796 -25265516 + MTC LTR MaLR 74 224 -197 3 1309 2190 149 68 3 chr13 95018796 95019166 -25265146 + ORR1B1 LTR MaLR 1 394 0 4 1309 1567 194 61 21 chr13 95019166 95019343 -25264969 + MTC LTR MaLR 225 413 -8 3 1309 189 107 0 0 chr13 95019378 95019406 -25264906 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1309 2005 186 70 0 chr13 95019410 95019796 -25264516 - Lx9 LINE L1 -180 7464 7052 4 1309 663 211 16 0 chr13 95019798 95019926 -25264386 - B1_Mur1 SINE Alu -15 134 5 4 1309 696 234 117 25 chr13 95019944 95019977 -25264335 - B3 SINE B2 0 216 166 4 1309 333 0 0 0 chr13 95019977 95020014 -25264298 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1309 696 234 117 25 chr13 95020014 95020177 -25264135 - B3 SINE B2 -51 165 2 4 1309 237 33 0 0 chr13 95020419 95020449 -25263863 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1309 255 31 0 0 chr13 95020482 95020514 -25263798 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1309 324 0 0 0 chr13 95020541 95020577 -25263735 + (TG)n Simple_repeat Simple_repeat 2 37 0 4 1309 514 179 0 56 chr13 95020604 95020782 -25263530 + (TG)n Simple_repeat Simple_repeat 2 169 0 4 1309 544 232 95 0 chr13 95020794 95020962 -25263350 + B3 SINE B2 28 211 -5 4 1309 1444 153 37 11 chr13 95021288 95021512 -25262800 + MTC LTR MaLR 1 231 -190 4 1309 440 310 34 7 chr13 95021512 95021658 -25262654 + B3 SINE B2 4 153 -63 5 1309 369 0 0 0 chr13 95021668 95021709 -25262603 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1309 355 246 182 0 chr13 95021709 95021819 -25262493 - MER21B LTR ERV1 -717 146 17 5 1309 279 0 0 0 chr13 95022139 95022170 -25262142 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1309 1160 35 0 41 chr13 95022173 95022320 -25261992 - B1_Mus1 SINE Alu -6 142 2 5 1309 412 185 12 0 chr13 95023370 95023451 -25260861 - PB1D7 SINE Alu -8 112 31 5 1309 306 0 0 0 chr13 95023630 95023664 -25260648 + (CA)n Simple_repeat Simple_repeat 1 34 0 5 1309 3463 166 79 35 chr13 95023749 95024218 -25260094 + RLTR25A LTR ERVK 85 567 -536 5 1309 249 33 0 0 chr13 95024218 95024248 -25260064 + (TTTAA)n Simple_repeat Simple_repeat 4 33 0 5 1309 3463 166 79 35 chr13 95024248 95024584 -25259728 + RLTR25A LTR ERVK 568 925 -178 5 1309 991 76 6 77 chr13 95025618 95025774 -25258538 + B1_Mus2 SINE Alu 1 145 -2 5 1309 243 0 0 0 chr13 95025774 95025801 -25258511 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1309 637 136 86 2 chr13 95025803 95025921 -25258391 + B1_Mur2 SINE Alu 8 135 -14 6 1309 311 254 75 50 chr13 95025815 95025935 -25258377 + ID_B1 SINE B4 102 224 0 6 1309 243 0 0 0 chr13 95025940 95025967 -25258345 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 6 1309 342 290 10 20 chr13 95025984 95026086 -25258226 + PB1D10 SINE Alu 2 102 -15 6 1309 1155 69 0 0 chr13 95026107 95026251 -25258061 + B1_Mus1 SINE Alu 1 144 -4 6 1309 576 275 40 12 chr13 95026470 95026643 -25257669 + B3A SINE B2 3 180 -18 6 1310 243 189 81 0 chr13 95027265 95027339 -25256973 + ID4 SINE ID 1 80 -3 6 1310 25 0 0 0 chr13 95027339 95027364 -25256948 + AT_rich Low_complexity Low_complexity 1 25 0 6 1310 425 252 173 15 chr13 95027806 95027939 -25256373 + RSINE1 SINE B4 11 164 -1 6 1310 1133 293 139 25 chr13 95028008 95029569 -25254743 + L1MA4 LINE L1 4178 5926 -374 7 1310 350 317 132 16 chr13 95030005 95030255 -25254057 + L1MC LINE L1 5382 5660 -2222 7 1310 1307 96 11 0 chr13 95030624 95030801 -25253511 + B2_Mm1t SINE B2 1 179 -14 7 1310 263 151 325 17 chr13 95030830 95030944 -25253368 + B2_Mm2 SINE B2 47 195 0 7 1310 345 229 9 52 chr13 95031035 95031150 -25253162 - PB1D9 SINE Alu -8 112 3 7 1310 521 233 62 0 chr13 95031832 95031961 -25252351 + B1_Mus2 SINE Alu 5 141 -6 7 1310 579 251 130 11 chr13 95033548 95033733 -25250579 + B3 SINE B2 10 216 0 7 1310 586 233 113 49 chr13 95033806 95033991 -25250321 + B3A SINE B2 2 198 0 7 1310 357 24 0 0 chr13 95034388 95034430 -25249882 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1310 635 171 100 0 chr13 95034435 95034575 -25249737 - B3 SINE B2 -31 185 32 7 1310 3102 176 18 28 chr13 95035379 95035981 -25248331 + RLTR17 LTR ERVK 1 596 -96 8 1310 719 208 7 14 chr13 95036930 95037076 -25247236 - B1_Mus2 SINE Alu -1 146 2 8 1310 750 103 0 0 chr13 95037434 95037541 -25246771 - B2_Mm2 SINE B2 -88 107 1 8 1310 547 248 67 64 chr13 95037596 95037924 -25246388 + L1MB7 LINE L1 4975 5303 -843 8 1310 236 225 0 0 chr13 95038133 95038173 -25246139 + L1MB7 LINE L1 5553 5592 -592 8 1310 507 291 29 53 chr13 95038467 95038674 -25245638 + B4 SINE B4 87 288 -4 8 1310 518 252 224 0 chr13 95038759 95038983 -25245329 + L1MB7 LINE L1 5816 6089 -85 8 1310 2083 261 134 12 chr13 95041212 95041937 -25242375 + Lx8 LINE L1 6277 7089 -384 8 1310 232 333 65 0 chr13 95042030 95042123 -25242189 + RMER15 LTR ERVL 359 457 -118 8 1310 191 114 29 0 chr13 95042138 95042173 -25242139 + (GGAGA)n Simple_repeat Simple_repeat 3 38 0 8 1310 26 30 0 0 chr13 95042344 95042377 -25241935 + AT_rich Low_complexity Low_complexity 1 33 0 8 1310 4763 59 5 2 chr13 95042624 95043218 -25241094 + L1_Mus2 LINE L1 5965 6560 -6 8 1310 545 279 45 18 chr13 95043573 95043796 -25240516 + L1M4 LINE L1 4898 5126 -1020 9 1310 231 114 0 0 chr13 95043893 95043928 -25240384 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1310 288 254 78 50 chr13 95044034 95044114 -25240198 + L1M4 LINE L1 5213 5294 -852 9 1310 1179 43 0 0 chr13 95044114 95044253 -25240059 + B1_Mus1 SINE Alu 2 140 -8 9 1310 231 36 0 0 chr13 95044253 95044281 -25240031 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 9 1310 296 242 151 10 chr13 95044281 95044403 -25239909 + L1M4 LINE L1 5295 5437 -752 9 1310 239 276 39 13 chr13 95044409 95044486 -25239826 + PB1D10 SINE Alu 1 79 -38 9 1310 21 36 0 0 chr13 95044711 95044739 -25239573 + AT_rich Low_complexity Low_complexity 1 28 0 9 1310 412 222 162 12 chr13 95045123 95045283 -25239029 - FAM SINE Alu 0 185 2 9 1310 1386 81 21 0 chr13 95045283 95045469 -25238843 - B2_Mm2 SINE B2 -4 191 2 9 1310 361 261 61 68 chr13 95046203 95046351 -25237961 + B4A SINE B4 1 147 -145 9 1310 644 249 149 52 chr13 95046651 95046939 -25237373 - MTD LTR MaLR 0 419 104 9 1310 919 72 0 0 chr13 95046939 95047050 -25237262 + L1Md_F2 LINE L1 5476 5586 -297 1 1310 7807 50 34 0 chr13 95047050 95048013 -25236299 + L1Md_F2 LINE L1 5587 6582 0 1 1310 335 260 172 45 chr13 95048210 95048464 -25235848 + MLT1H-int LTR MaLR 582 973 -516 1 1310 304 273 181 54 chr13 95048477 95048698 -25235614 + MLT1H-int LTR MaLR 980 1228 -181 1 1310 263 259 11 110 chr13 95048696 95048787 -25235525 + MLT1H LTR MaLR 76 157 -392 1 1310 252 0 0 0 chr13 95049005 95049033 -25235279 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1310 368 320 53 0 chr13 95049461 95049611 -25234701 + MLT1A0 LTR MaLR 7 164 -244 1 1310 480 281 0 2 chr13 95049669 95049798 -25234514 + MLT1A0 LTR MaLR 238 407 -1 1 1310 224 321 0 45 chr13 95049865 95049953 -25234359 - PB1D10 SINE Alu -33 84 1 1 1310 281 303 0 0 chr13 95050042 95050141 -25234171 + BC1_Mm scRNA scRNA 9 107 -45 1 1310 399 175 126 0 chr13 95050193 95050296 -25234016 - MER44B DNA MER2_type -87 463 348 1 1310 646 232 99 178 chr13 95050302 95050635 -25233677 + B4A SINE B4 1 292 0 1 1310 752 198 403 12 chr13 95051008 95051228 -25233084 - MTC LTR MaLR -7 414 112 1 1310 979 158 152 5 chr13 95051228 95051425 -25232887 - URR1A DNA MER1_type 0 226 1 1 1310 752 151 27 61 chr13 95051425 95051527 -25232785 - MTC LTR MaLR -310 111 10 1 1310 294 265 49 39 chr13 95051559 95051661 -25232651 - MIRc SINE MIR -141 127 25 1 1310 383 216 49 49 chr13 95051755 95051857 -25232455 + RSINE1 SINE B4 43 144 -21 1 1310 189 0 0 0 chr13 95051869 95051890 -25232422 + (CA)n Simple_repeat Simple_repeat 1 21 0 1 1310 556 223 28 35 chr13 95052434 95052578 -25231734 - B1F2 SINE Alu 0 149 7 1 1310 336 250 11 11 chr13 95053910 95054003 -25230309 + PB1D10 SINE Alu 23 115 -2 1 1310 37 23 0 0 chr13 95054930 95054974 -25229338 + GC_rich Low_complexity Low_complexity 1 44 0 1 1310 356 278 66 22 chr13 95057096 95057232 -25227080 - MTD LTR MaLR 0 379 238 1 1310 365 321 30 24 chr13 95057247 95057413 -25226899 - MTD LTR MaLR -247 172 6 1 1310 239 296 13 13 chr13 95058187 95058274 -25226038 - L2a LINE L2 0 3426 3289 1 1310 355 264 0 15 chr13 95058291 95058384 -25225928 + RSINE1 SINE B4 2 90 -202 1 1310 482 323 15 0 chr13 95058459 95058592 -25225720 - RSINE1 SINE B4 -29 136 2 1 1310 204 40 0 0 chr13 95058682 95058707 -25225605 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1 1310 707 176 137 74 chr13 95058707 95058845 -25225467 - B3 SINE B2 -13 203 58 1 1310 2845 32 67 12 chr13 95058845 95059191 -25225121 - RLTR10B2 LTR ERVK 0 365 1 1 1310 707 176 137 74 chr13 95059191 95059242 -25225070 - B3 SINE B2 -159 57 2 1 1310 544 182 69 31 chr13 95059242 95059372 -25224940 - B1_Mur2 SINE Alu 0 149 15 1 1310 322 274 57 36 chr13 95059247 95059387 -25224925 - ID_B1 SINE B4 -2 222 80 1 1310 228 267 26 39 chr13 95059608 95059686 -25224626 + L2c LINE L2 3273 3349 -38 1 1310 576 95 0 0 chr13 95059738 95059822 -25224490 + (GGGA)n Simple_repeat Simple_repeat 3 86 0 1 1310 293 289 35 69 chr13 95061272 95061417 -25222895 + L2 LINE L2 2693 2832 -587 1 1310 446 351 35 0 chr13 95061649 95061823 -25222489 - MLT1A0 LTR MaLR 0 365 186 1 1310 219 185 21 11 chr13 95061848 95061941 -25222371 + (TA)n Simple_repeat Simple_repeat 2 95 0 1 1310 369 0 0 0 chr13 95061947 95061988 -25222324 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1310 813 240 35 15 chr13 95062005 95062208 -25222104 - ID_B1 SINE B4 -16 208 2 1 1310 342 0 0 0 chr13 95062540 95062578 -25221734 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1310 723 229 118 23 chr13 95062580 95062871 -25221441 - MT2A LTR ERVL -65 536 87 1 1310 290 183 15 104 chr13 95062872 95062939 -25221373 - MT2A LTR ERVL -414 119 59 1 1310 351 182 76 43 chr13 95063356 95063448 -25220864 - MT2A LTR ERVL -438 95 1 1 1310 211 254 43 43 chr13 95064077 95064147 -25220165 - MIRb SINE MIR -92 176 107 1 1310 723 81 0 0 chr13 95064603 95064702 -25219610 + (TC)n Simple_repeat Simple_repeat 2 100 0 1 1310 330 26 0 0 chr13 95064702 95064741 -25219571 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1310 502 288 106 48 chr13 95064753 95064823 -25219489 - B4A SINE B4 0 292 229 1 1310 1002 225 230 6 chr13 95064823 95065167 -25219145 - MTC LTR MaLR 0 421 1 1 1310 502 288 106 48 chr13 95065167 95065369 -25218943 - B4A SINE B4 -64 228 4 1 1310 252 0 0 0 chr13 95067001 95067029 -25217283 + (T)n Simple_repeat Simple_repeat 1 28 0 1 1310 634 287 53 11 chr13 95067199 95067367 -25216945 + B3A SINE B2 1 175 -23 1 1310 195 42 0 0 chr13 95067367 95067391 -25216921 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1310 634 287 53 11 chr13 95067391 95067412 -25216900 + B3A SINE B2 176 198 0 1 1310 198 0 0 0 chr13 95067508 95067530 -25216782 + (TG)n Simple_repeat Simple_repeat 1 22 0 1 1310 360 0 0 0 chr13 95067530 95067569 -25216743 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1310 377 224 47 0 chr13 95067569 95067654 -25216658 - B1F SINE Alu -9 140 52 1 1310 456 19 0 0 chr13 95067691 95067744 -25216568 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1310 409 268 10 0 chr13 95067861 95067958 -25216354 + PB1D7 SINE Alu 1 98 -22 1 1310 249 83 0 0 chr13 95067973 95068009 -25216303 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1310 1290 67 56 0 chr13 95068106 95068285 -25216027 + B2_Mm1a SINE B2 2 190 -3 1 1310 265 341 60 32 chr13 95068628 95068846 -25215466 + MER77 LTR ERVL 315 538 -69 1 1310 270 0 0 0 chr13 95069110 95069140 -25215172 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1310 631 126 9 9 chr13 95070067 95070179 -25214133 + ORR1B1 LTR MaLR 283 394 0 1 1310 347 216 42 0 chr13 95070587 95070754 -25213558 + (TG)n Simple_repeat Simple_repeat 2 175 0 1 1310 234 250 0 0 chr13 95070846 95070898 -25213414 - B4 SINE B4 -240 52 1 1 1310 674 177 225 17 chr13 95071571 95071749 -25212563 + B3 SINE B2 2 216 0 1 1310 795 153 95 0 chr13 95071935 95072072 -25212240 - B1_Mur4 SINE Alu 0 150 1 1 1310 24 0 0 0 chr13 95072640 95072664 -25211648 + AT_rich Low_complexity Low_complexity 1 24 0 1 1310 833 114 0 8 chr13 95072769 95072902 -25211410 + (TTC)n Simple_repeat Simple_repeat 1 132 0 1 1310 654 282 28 42 chr13 95072929 95073062 -25211250 - Lx8 LINE L1 -421 7275 7141 1 1310 2131 145 50 19 chr13 95073062 95073421 -25210891 + ORR1D1 LTR MaLR 1 370 -4 1 1310 654 283 31 44 chr13 95073421 95073566 -25210746 - Lx8 LINE L1 -321 7152 6996 1 1310 285 358 43 21 chr13 95073664 95073804 -25210508 + B4A SINE B4 2 144 -148 1 1310 1433 78 0 35 chr13 95073904 95074064 -25210248 + B2_Mm1a SINE B2 1 160 -33 1 1310 207 0 0 0 chr13 95074064 95074087 -25210225 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 1310 1433 78 0 35 chr13 95074087 95074125 -25210187 + B2_Mm1a SINE B2 161 192 -1 1 1310 344 324 9 0 chr13 95074945 95075056 -25209256 + MER58B DNA MER1_type 183 294 -47 1 1310 787 135 0 0 chr13 95075285 95075411 -25208901 + B2_Mm2 SINE B2 4 129 -66 1 1310 285 125 0 0 chr13 95075435 95075491 -25208821 + (CAAT)n Simple_repeat Simple_repeat 2 57 0 1 1310 504 0 0 0 chr13 95076133 95076189 -25208123 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 1 1310 936 271 24 8 chr13 95077485 95077731 -25206581 + B4A SINE B4 31 280 -12 1 1310 298 306 272 0 chr13 95078714 95078861 -25205451 - ZP3AR Satellite Satellite -24 188 2 1 1310 184 286 114 0 chr13 95079123 95079193 -25205119 + L2c LINE L2 3272 3349 -38 1 1310 1697 252 34 45 chr13 95079372 95079900 -25204412 - RMER5 LTR ERV1 0 534 13 1 1310 961 99 0 78 chr13 95080284 95080438 -25203874 - B1_Mus1 SINE Alu -6 142 1 1 1310 1229 64 85 17 chr13 95080442 95080618 -25203694 - B2_Mm2 SINE B2 -7 188 1 1 1310 183 80 0 0 chr13 95081046 95081071 -25203241 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1310 29 28 0 0 chr13 95081397 95081433 -25202879 + AT_rich Low_complexity Low_complexity 1 36 0 1 1310 494 97 0 0 chr13 95081433 95081505 -25202807 - B1_Mus2 SINE Alu 0 147 76 1 1310 378 261 61 43 chr13 95081538 95081555 -25202757 + CYRA11_Mm Unknown Y-chromosome 153 319 -298 1 1310 947 116 0 0 chr13 95081555 95081702 -25202610 - URR1A DNA MER1_type -1 225 79 1 1310 243 273 13 13 chr13 95081987 95082065 -25202247 - MER45A DNA Tip100 0 178 101 1 1310 469 310 118 0 chr13 95082073 95082260 -25202052 - ID_B1 SINE B4 -3 221 13 1 1310 285 271 0 0 chr13 95082261 95082331 -25201981 - MER45A DNA Tip100 -51 127 58 1 1310 1512 169 197 12 chr13 95082333 95082663 -25201649 + ORR1B1 LTR MaLR 4 394 0 1 1310 293 207 42 94 chr13 95082734 95082787 -25201525 + MER3 DNA MER1_type 19 71 -138 1 1310 2286 140 101 8 chr13 95082787 95083183 -25201129 + RLTR10C LTR ERVK 1 433 -3 1 1310 293 207 42 94 chr13 95083183 95083225 -25201087 + MER3 DNA MER1_type 72 109 -100 1 1310 1293 103 38 5 chr13 95083571 95083757 -25200555 + B2_Mm2 SINE B2 1 192 -3 1 1310 296 212 38 0 chr13 95083902 95083982 -25200330 - MER53 DNA hAT 0 193 111 1 1310 384 22 0 0 chr13 95084071 95084116 -25200196 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1310 686 211 152 11 chr13 95084135 95084152 -25200160 - B3 SINE B2 -14 202 187 1 1310 2659 118 72 24 chr13 95084152 95084612 -25199700 + RLTR45 LTR ERVK 1 482 0 1 1310 836 161 31 25 chr13 95084612 95084771 -25199541 - B2_Mm2 SINE B2 -35 160 1 1 1310 643 259 11 49 chr13 95084771 95084947 -25199365 - B4 SINE B4 -41 251 83 1 1310 979 131 14 7 chr13 95085117 95085263 -25199049 - B1_Mur4 SINE Alu -1 149 3 1 1310 24 32 0 0 chr13 95085483 95085514 -25198798 + AT_rich Low_complexity Low_complexity 1 31 0 1 1310 531 267 93 36 chr13 95085514 95085708 -25198604 - B3 SINE B2 -11 205 1 1 1310 905 153 6 13 chr13 95085863 95086022 -25198290 + B2_Mm2 SINE B2 4 161 -34 1 1310 351 324 22 32 chr13 95086028 95086213 -25198099 + MIRb SINE MIR 86 268 0 1 1310 2022 135 108 14 chr13 95086257 95086617 -25197695 + ORR1B1 LTR MaLR 1 394 0 1 1310 394 293 130 57 chr13 95087411 95087657 -25196655 + L1MC LINE L1 5382 5645 -2237 1 1310 793 102 0 104 chr13 95087758 95087922 -25196390 - B2_Mm2 SINE B2 -47 148 2 1 1310 312 287 0 25 chr13 95088063 95088181 -25196131 + (TA)n Simple_repeat Simple_repeat 1 115 0 1 1310 343 252 62 110 chr13 95088185 95088449 -25195863 - RMER4B LTR ERVK -23 588 349 1 1310 1020 196 87 43 chr13 95088547 95088783 -25195529 - RMER4B LTR ERVK -296 289 46 1 1310 301 22 21 21 chr13 95088783 95088830 -25195482 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 1 1310 1204 55 0 0 chr13 95088830 95088976 -25195336 - B1_Mus1 SINE Alu -2 146 1 2 1310 1020 196 87 43 chr13 95088976 95089015 -25195297 - RMER4B LTR ERVK -540 45 2 1 1310 1658 190 74 55 chr13 95089091 95089458 -25194854 - ORR1D1 LTR MaLR 0 374 1 2 1310 767 226 267 32 chr13 95089506 95089991 -25194321 - RMER20B LTR ERVK -38 589 2 2 1310 539 169 0 0 chr13 95090017 95090106 -25194206 - B3 SINE B2 -126 90 2 2 1310 1261 94 11 11 chr13 95090116 95090299 -25194013 - B2_Mm1a SINE B2 -9 184 2 2 1310 1180 106 208 42 chr13 95091572 95091641 -25192671 + RMER17C LTR ERVK 19 87 -323 2 1310 594 0 0 0 chr13 95091641 95091707 -25192605 + (TTCTC)n Simple_repeat Simple_repeat 3 68 0 2 1310 1180 106 208 42 chr13 95091707 95091973 -25192339 + RMER17C LTR ERVK 88 409 -1 2 1310 1370 208 123 27 chr13 95092222 95092597 -25191715 - MTD LTR MaLR -8 411 1 2 1310 575 255 118 20 chr13 95093629 95093833 -25190479 + MER58A DNA MER1_type 1 224 0 2 1310 376 74 19 0 chr13 95093900 95093954 -25190358 - ORR1B1 LTR MaLR 0 394 340 2 1310 198 191 0 0 chr13 95093954 95094001 -25190311 + T-rich Low_complexity Low_complexity 1 47 0 2 1310 1205 62 0 0 chr13 95094004 95094150 -25190162 - B1_Mm SINE Alu 0 147 2 2 1310 1647 152 120 6 chr13 95094150 95094467 -25189845 - ORR1B1 LTR MaLR -41 353 1 2 1310 443 193 102 48 chr13 95094467 95094613 -25189699 + B3A SINE B2 29 182 -16 2 1310 534 329 49 58 chr13 95094652 95094785 -25189527 - L2 LINE L2 -734 2685 2557 2 1310 538 282 49 53 chr13 95094785 95095010 -25189302 + ID_B1 SINE B4 1 224 0 2 1310 534 329 49 58 chr13 95095010 95095224 -25189088 - L2 LINE L2 -863 2556 2341 2 1310 208 139 0 0 chr13 95095496 95095532 -25188780 + (CAAG)n Simple_repeat Simple_repeat 2 37 0 2 1310 404 19 0 19 chr13 95095574 95095628 -25188684 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1310 423 0 0 0 chr13 95095628 95095674 -25188638 + (GA)n Simple_repeat Simple_repeat 1 47 0 2 1310 1181 48 7 0 chr13 95096262 95096407 -25187905 - B1_Mus1 SINE Alu -1 147 2 2 1310 329 62 21 0 chr13 95096468 95096516 -25187796 + (TCCC)n Simple_repeat Simple_repeat 3 51 0 2 1310 1680 198 97 23 chr13 95096743 95096824 -25187488 - RLTR20B1 LTR ERVK -10 553 470 2 1310 524 15 15 0 chr13 95096824 95096889 -25187423 + (CA)n Simple_repeat Simple_repeat 2 67 0 2 1310 1680 198 97 23 chr13 95096889 95097242 -25187070 - RLTR20B1 LTR ERVK -94 469 89 2 1310 879 228 205 4 chr13 95097246 95097514 -25186798 - Lx9 LINE L1 -1152 6492 6171 2 1310 247 266 20 41 chr13 95097516 95097614 -25186698 - Lx9 LINE L1 -1580 6064 5969 2 1310 1093 208 53 30 chr13 95097609 95097911 -25186401 - L1_Rod LINE L1 -4299 1548 1240 2 1310 1740 178 17 25 chr13 95098426 95098783 -25185529 - L1_Rod LINE L1 -6398 1210 857 2 1310 505 212 97 110 chr13 95098793 95098937 -25185375 - URR1B DNA MER1_type 0 225 75 2 1310 1081 82 0 0 chr13 95098937 95099072 -25185240 - B1_Mus1 SINE Alu -13 135 1 2 1310 505 212 97 110 chr13 95099072 95099155 -25185157 - URR1B DNA MER1_type -151 74 1 2 1310 315 0 0 0 chr13 95099179 95099214 -25185098 + (T)n Simple_repeat Simple_repeat 1 35 0 2 1310 1233 249 74 26 chr13 95099214 95099666 -25184646 - L1_Rod LINE L1 -6767 841 443 2 1310 288 132 113 0 chr13 95099674 95099727 -25184585 + Lx8 LINE L1 7254 7312 -161 2 1310 810 31 0 0 chr13 95099728 95099825 -25184487 + (TC)n Simple_repeat Simple_repeat 2 98 0 2 1310 21 57 0 0 chr13 95099948 95099983 -25184329 + AT_rich Low_complexity Low_complexity 1 35 0 2 1310 260 154 19 0 chr13 95100138 95100190 -25184122 + CT-rich Low_complexity Low_complexity 1 53 0 2 1310 21 0 0 0 chr13 95101121 95101142 -25183170 + AT_rich Low_complexity Low_complexity 1 21 0 2 1310 1696 16 0 0 chr13 95101149 95101336 -25182976 + B2_Mm1a SINE B2 3 189 -4 2 1310 528 271 28 0 chr13 95101534 95101678 -25182634 - B1F SINE Alu -1 148 1 2 1310 7518 79 24 9 chr13 95103395 95105051 -25179261 + L1VL4 LINE L1 29 1721 -1838 2 1310 1161 75 0 0 chr13 95105051 95105197 -25179115 + B1_Mm SINE Alu 2 147 0 2 1310 7518 67 6 15 chr13 95105197 95105374 -25178938 + L1VL4 LINE L1 1722 1891 -1668 2 1310 4206 144 13 30 chr13 95105368 95105446 -25178866 + Lx LINE L1 5190 5257 -626 2 1310 859 107 206 6 chr13 95105446 95105606 -25178706 + B2_Mm1a SINE B2 2 193 0 2 1310 6346 119 80 8 chr13 95105606 95106913 -25177399 + Lx LINE L1 5258 6653 -1 2 1310 252 263 21 21 chr13 95107503 95107600 -25176712 + (TA)n Simple_repeat Simple_repeat 2 98 0 2 1310 234 406 12 6 chr13 95107748 95107909 -25176403 - MIRb SINE MIR -6 262 101 2 1310 1623 213 69 0 chr13 95109096 95109444 -25174868 + ORR1D1 LTR MaLR 1 372 -2 2 1310 583 287 29 0 chr13 95109448 95109622 -25174690 - RMER30 DNA MER1_type -19 183 5 2 1310 630 245 7 0 chr13 95110097 95110236 -25174076 + B1F2 SINE Alu 1 140 -9 2 1310 263 28 0 27 chr13 95110236 95110273 -25174039 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 2 1310 28 29 0 0 chr13 95110308 95110343 -25173969 + AT_rich Low_complexity Low_complexity 1 35 0 2 1310 880 196 0 0 chr13 95110343 95110486 -25173826 - B1_Mus1 SINE Alu -1 147 5 2 1310 2472 128 35 5 chr13 95110585 95110986 -25173326 - MTC LTR MaLR -8 413 1 2 1310 1203 97 32 11 chr13 95111432 95111619 -25172693 + B2_Mm2 SINE B2 5 195 0 2 1310 1067 110 7 0 chr13 95111698 95111844 -25172468 + B1_Mus1 SINE Alu 2 148 0 2 1310 288 77 0 0 chr13 95111844 95111883 -25172429 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1310 974 129 47 31 chr13 95111895 95112087 -25172225 - B2_Mm2 SINE B2 0 195 1 2 1310 244 256 77 11 chr13 95112601 95112692 -25171620 + L1M2 LINE L1 2277 2373 -4476 2 1310 386 308 91 21 chr13 95112806 95113048 -25171264 + L1M2 LINE L1 2392 2650 -4199 2 1310 647 243 0 7 chr13 95113086 95113223 -25171089 + B1_Mur1 SINE Alu 14 149 0 2 1310 495 283 46 72 chr13 95113223 95113417 -25170895 + B3A SINE B2 9 197 -1 2 1310 2994 128 42 8 chr13 95113720 95114201 -25170111 + Lx3C LINE L1 6473 6969 -7 2 1310 2522 106 87 5 chr13 95114210 95114639 -25169673 + ORR1A4-int LTR MaLR 1029 1493 -470 2 1310 1815 144 7 7 chr13 95114639 95114947 -25169365 + RLTR10E LTR ERVK 1 308 -3 2 1310 2213 106 51 174 chr13 95114948 95115494 -25168818 + ORR1A4-int LTR MaLR 1485 1963 0 2 1310 1886 142 14 58 chr13 95115494 95115838 -25168474 + ORR1A4 LTR MaLR 1 329 0 2 1310 1105 61 0 39 chr13 95116440 95116593 -25167719 - B1_Mus2 SINE Alu 0 147 1 2 1310 271 268 44 18 chr13 95116959 95117073 -25167239 + PB1D9 SINE Alu 4 120 0 2 1310 531 272 8 0 chr13 95117190 95117310 -25167002 + PB1 SINE Alu 1 121 -6 2 1310 426 39 0 0 chr13 95117310 95117362 -25166950 + (CAGAG)n Simple_repeat Simple_repeat 1 52 0 2 1310 416 311 0 0 chr13 95117669 95117772 -25166540 - PB1 SINE Alu -7 120 18 2 1310 1652 142 18 73 chr13 95117873 95118214 -25166098 + RLTRETN_Mm LTR ERVK 1 322 0 2 1310 496 155 116 18 chr13 95118287 95118399 -25165913 - B1_Mus2 SINE Alu 0 147 25 2 1310 36127 52 4 5 chr13 95118980 95120816 -25163496 - L1Md_F2 LINE L1 0 6582 4732 2 1310 210 37 0 0 chr13 95120816 95120843 -25163469 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1310 36127 54 8 5 chr13 95120843 95124328 -25159984 - L1Md_F2 LINE L1 -1152 4731 1251 2 1310 872 200 29 24 chr13 95124328 95124533 -25159779 - RLTR20B2 LTR ERVK -354 206 1 2 1310 1172 280 42 42 chr13 95124533 95124894 -25159418 - MTE2b LTR MaLR -17 362 2 2 1310 285 301 20 51 chr13 95124896 95124994 -25159318 - PB1D10 SINE Alu -21 96 2 2 1310 324 48 0 0 chr13 95125024 95125066 -25159246 + (TCTA)n Simple_repeat Simple_repeat 3 44 0 2 1310 615 39 0 0 chr13 95125212 95125290 -25159022 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 2 1310 550 170 74 14 chr13 95125291 95125412 -25158900 - B1_Mur4 SINE Alu -8 112 1 2 1310 501 335 54 31 chr13 95125468 95125727 -25158585 - B4A SINE B4 -26 266 2 2 1310 3062 64 8 5 chr13 95125860 95126255 -25158057 - MTA_Mm LTR MaLR 0 396 1 2 1310 440 145 320 8 chr13 95126255 95126380 -25157932 - URR1A DNA MER1_type -62 164 1 2 1310 1750 119 52 19 chr13 95126380 95126688 -25157624 + MTC LTR MaLR 104 421 0 2 1310 489 216 45 0 chr13 95126980 95127091 -25157221 + PB1D7 SINE Alu 5 120 0 2 1310 564 22 0 182 chr13 95127121 95127218 -25157094 + L1_Mus1 LINE L1 6476 6558 -9 2 1310 1472 79 5 0 chr13 95127218 95127407 -25156905 + B2_Mm1a SINE B2 2 191 -2 2 1310 564 22 0 182 chr13 95127407 95127419 -25156893 + L1_Mus1 LINE L1 6559 6565 -2 2 1310 201 39 0 0 chr13 95129286 95129312 -25155000 + (TGGG)n Simple_repeat Simple_repeat 1 26 0 2 1310 628 171 0 0 chr13 95130002 95130113 -25154199 - B1F2 SINE Alu -5 144 34 2 1310 345 194 30 40 chr13 95130287 95130383 -25153929 - PB1D7 SINE Alu -5 122 27 2 1310 250 256 231 0 chr13 95130892 95130970 -25153342 - MIRb SINE MIR -118 150 55 2 1310 377 38 0 0 chr13 95131089 95131142 -25153170 + B1_Mm SINE Alu 95 147 0 2 1310 195 129 0 0 chr13 95131142 95131173 -25153139 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1310 374 200 40 0 chr13 95131175 95131250 -25153062 - PB1D10 SINE Alu -1 116 39 2 1310 1227 34 0 7 chr13 95131403 95131541 -25152771 + B1_Mm SINE Alu 1 138 -9 2 1310 285 51 0 0 chr13 95131541 95131580 -25152732 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1310 514 230 26 9 chr13 95131593 95131707 -25152605 - PB1D10 SINE Alu -1 116 1 2 1310 605 265 42 26 chr13 95131859 95132049 -25152263 - B3A SINE B2 -4 194 2 2 1310 209 269 15 15 chr13 95132065 95132133 -25152179 + C-rich Low_complexity Low_complexity 4 71 0 2 1310 253 269 61 116 chr13 95132401 95132548 -25151764 - L1MC4 LINE L1 -371 7671 7533 2 1310 529 232 18 50 chr13 95132832 95133003 -25151309 - B3A SINE B2 0 216 49 2 1310 1169 80 30 0 chr13 95133558 95133742 -25150570 - B2_Mm1t SINE B2 -1 192 6 2 1310 264 122 0 0 chr13 95133742 95133783 -25150529 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 2 1310 363 276 0 10 chr13 95133965 95134064 -25150248 - L1MA6 LINE L1 -7 6293 6196 2 1310 1368 224 56 48 chr13 95134170 95134545 -25149767 - ORR1C2 LTR MaLR 0 384 7 2 1310 251 232 18 0 chr13 95134873 95134929 -25149383 + CT-rich Low_complexity Low_complexity 2 58 0 2 1310 333 297 128 10 chr13 95134980 95135082 -25149230 - B1F SINE Alu -33 116 3 2 1310 960 104 30 6 chr13 95136144 95136308 -25148004 - URR1A DNA MER1_type 0 226 59 2 1310 264 30 0 0 chr13 95136527 95136560 -25147752 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 1310 494 260 75 0 chr13 95136575 95136721 -25147591 + B3A SINE B2 16 172 -26 3 1310 389 95 16 0 chr13 95136722 95136785 -25147527 + (CA)n Simple_repeat Simple_repeat 1 64 0 3 1310 21 0 0 0 chr13 95137659 95137680 -25146632 + AT_rich Low_complexity Low_complexity 1 21 0 3 1310 232 327 36 36 chr13 95138511 95138622 -25145690 - RSINE1 SINE B4 -2 163 53 3 1310 366 333 46 28 chr13 95138831 95139122 -25145190 - L2b LINE L2 -285 3090 2798 3 1310 789 170 0 0 chr13 95139631 95139766 -25144546 - B1_Mur4 SINE Alu -12 138 4 3 1310 1661 125 65 10 chr13 95143345 95143635 -25140677 - ORR1A4 LTR MaLR -23 306 1 3 1310 727 234 14 0 chr13 95143771 95143912 -25140400 - B1_Mur2 SINE Alu -5 144 2 3 1310 288 0 0 0 chr13 95143950 95143982 -25140330 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 3 1310 1144 50 0 21 chr13 95143985 95144128 -25140184 - B1_Mus1 SINE Alu -7 141 2 3 1310 279 254 82 82 chr13 95144885 95145031 -25139281 + RSINE1 SINE B4 1 146 -19 3 1310 527 189 161 23 chr13 95145201 95145331 -25138981 + B1_Mur4 SINE Alu 3 150 0 3 1310 195 129 0 0 chr13 95145362 95145393 -25138919 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1310 1004 97 19 0 chr13 95147101 95147255 -25137057 + B2_Mm1a SINE B2 2 158 -35 3 1310 414 0 0 0 chr13 95147255 95147301 -25137011 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 3 1310 363 302 86 0 chr13 95147596 95147758 -25136554 + MER58A DNA MER1_type 43 218 -6 3 1310 1162 75 0 7 chr13 95147825 95147973 -25136339 - B1_Mm SINE Alu 0 147 1 3 1310 1579 183 67 31 chr13 95148299 95148717 -25135595 - RMER4A LTR ERVK 0 466 34 3 1310 21 57 0 0 chr13 95149671 95149706 -25134606 + AT_rich Low_complexity Low_complexity 1 35 0 3 1310 239 188 141 0 chr13 95150658 95150722 -25133590 + RSINE1 SINE B4 86 158 -7 3 1310 350 199 39 0 chr13 95150766 95150849 -25133463 + B1F2 SINE Alu 22 106 -11 3 1310 557 196 119 17 chr13 95151258 95151434 -25132878 - MER5C DNA MER1_type -7 306 113 3 1310 695 212 146 5 chr13 95152905 95153090 -25131222 - B3 SINE B2 -5 211 1 3 1310 238 292 0 30 chr13 95153122 95153189 -25131123 - RSINE1 SINE B4 -15 150 86 3 1310 332 282 21 115 chr13 95153216 95153408 -25130904 - B4 SINE B4 -118 174 1 3 1310 1556 33 5 16 chr13 95153475 95153660 -25130652 - B2_Mm1t SINE B2 -9 184 2 3 1310 310 274 228 22 chr13 95153899 95154127 -25130185 - MLT1B LTR MaLR -36 354 80 3 1310 705 24 0 0 chr13 95154146 95154229 -25130083 + (TTC)n Simple_repeat Simple_repeat 2 84 0 3 1310 1477 198 174 121 chr13 95154254 95154608 -25129704 - MT2A LTR ERVL 0 533 131 3 1310 1365 89 11 5 chr13 95154608 95154799 -25129513 - B2_Mm1t SINE B2 0 193 2 3 1310 1477 198 174 121 chr13 95154799 95154950 -25129362 - MT2A LTR ERVL -403 130 1 3 1310 492 259 14 21 chr13 95154950 95155084 -25129228 - B3 SINE B2 -14 202 68 3 1310 847 180 169 0 chr13 95155590 95155768 -25128544 + URR1A DNA MER1_type 19 226 0 3 1310 690 279 175 46 chr13 95156294 95156790 -25127522 - L1ME2z LINE L1 -542 5902 5343 3 1310 452 290 85 13 chr13 95156861 95157085 -25127227 - L1MD2 LINE L1 -16 6343 6104 3 1310 427 243 19 0 chr13 95157199 95157302 -25127010 - L1MD2 LINE L1 -366 5876 5772 3 1310 630 240 96 24 chr13 95157379 95157445 -25126867 + RCHARR1 DNA MER1_type 751 832 -142 3 1310 675 37 0 0 chr13 95157445 95157527 -25126785 + (TA)n Simple_repeat Simple_repeat 1 82 0 3 1310 630 240 96 24 chr13 95157527 95157669 -25126643 + RCHARR1 DNA MER1_type 833 974 0 3 1310 646 188 124 24 chr13 95157909 95158078 -25126234 - B2_Mm2 SINE B2 0 195 10 3 1310 214 285 87 62 chr13 95158068 95158093 -25126219 - B4A SINE B4 -43 249 136 3 1310 261 286 134 8 chr13 95158093 95158220 -25126092 - B1_Mus1 SINE Alu -1 147 5 3 163 264 321 14 41 chr13 95158250 95158402 -25125910 - MLT1B-int LTR MaLR -724 647 507 3 1311 285 239 0 14 chr13 95158865 95158937 -25125375 - MLT1B-int LTR MaLR -873 498 428 3 1311 301 365 15 3 chr13 95158946 95159293 -25125019 + CT-rich Low_complexity Low_complexity 1 351 0 3 1311 538 236 14 14 chr13 95159399 95159545 -25124767 - MLT1B-int LTR MaLR -962 409 264 3 1311 198 0 0 0 chr13 95161461 95161483 -25122829 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1311 1158 82 0 0 chr13 95161483 95161630 -25122682 - B1_Mus1 SINE Alu 0 148 2 3 1311 882 256 17 8 chr13 95161630 95161866 -25122446 + Lx7 LINE L1 6158 6395 -1301 3 1311 259 225 292 0 chr13 95162860 95162949 -25121363 - PB1D10 SINE Alu 0 117 3 3 1311 504 0 0 0 chr13 95164159 95164215 -25120097 + (GA)n Simple_repeat Simple_repeat 2 57 0 3 1311 321 169 12 24 chr13 95164268 95164353 -25119959 + CT-rich Low_complexity Low_complexity 3 86 0 3 1311 1249 174 59 8 chr13 95165544 95165782 -25118530 - MTD LTR MaLR -36 383 134 3 1311 400 207 317 0 chr13 95166186 95166331 -25117981 - L1MB7 LINE L1 -67 6117 5927 3 1311 274 209 43 29 chr13 95167114 95167183 -25117129 - ID4 SINE ID -4 79 10 3 1311 887 209 47 33 chr13 95168117 95168330 -25115982 - B3 SINE B2 0 216 1 3 1311 1306 28 0 14 chr13 95170050 95170197 -25114115 - B1_Mus2 SINE Alu -2 145 1 3 1311 241 293 49 0 chr13 95170333 95170415 -25113897 + PB1D10 SINE Alu 22 107 -10 3 1311 396 198 143 38 chr13 95171454 95171559 -25112753 + B1F SINE Alu 23 138 -11 3 1311 216 365 66 58 chr13 95172051 95172310 -25112002 + L3 LINE CR1 3549 3809 -680 3 1311 230 362 28 28 chr13 95172479 95172587 -25111725 + L3 LINE CR1 3990 4097 -392 3 1311 240 242 81 0 chr13 95172598 95172660 -25111652 + tRNA-Ala-GCY_ tRNA tRNA 9 75 0 3 1311 3058 230 123 30 chr13 95174130 95174969 -25109343 - Lx6 LINE L1 -1 7459 6543 3 1311 8474 165 55 17 chr13 95174976 95176828 -25107484 - Lx6 LINE L1 -964 6086 4161 3 1311 404 269 223 26 chr13 95177091 95177220 -25107092 + B4A SINE B4 2 177 -115 3 1311 225 0 0 0 chr13 95177220 95177245 -25107067 + (CAGC)n Simple_repeat Simple_repeat 2 26 0 3 1311 404 269 223 26 chr13 95177245 95177344 -25106968 + B4A SINE B4 178 275 -17 3 1311 848 10 10 0 chr13 95177598 95177699 -25106613 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 3 1311 841 209 11 84 chr13 95177702 95177880 -25106432 - B3 SINE B2 -48 168 4 3 1311 269 135 19 0 chr13 95178670 95178722 -25105590 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 3 1311 824 208 21 0 chr13 95178934 95179078 -25105234 + B1_Mur1 SINE Alu 3 149 0 3 1311 310 321 57 0 chr13 95179197 95179303 -25105009 - PB1D7 SINE Alu -8 112 1 3 1311 389 253 110 0 chr13 95179677 95179823 -25104489 - L1MC4 LINE L1 -3404 2810 2649 3 1311 576 161 0 0 chr13 95179854 95179978 -25104334 + (TCTA)n Simple_repeat Simple_repeat 3 126 0 3 1311 566 259 30 37 chr13 95179978 95180142 -25104170 - RSINE1 SINE B4 0 165 3 3 1311 268 273 219 18 chr13 95180178 95180461 -25103851 - L1MC4 LINE L1 -3633 2581 2242 3 1311 847 150 0 0 chr13 95181043 95181176 -25103136 + B1_Mus2 SINE Alu 6 138 -9 3 1311 237 291 76 17 chr13 95181274 95181393 -25102919 - B1F SINE Alu 0 149 24 3 1311 269 252 54 36 chr13 95181294 95181405 -25102907 - ID_B1 SINE B4 -18 206 94 3 1311 202 148 66 0 chr13 95182173 95182234 -25102078 + (TTATA)n Simple_repeat Simple_repeat 4 68 0 3 1311 21 36 0 0 chr13 95182237 95182265 -25102047 + AT_rich Low_complexity Low_complexity 1 28 0 3 1311 733 136 57 7 chr13 95182355 95182496 -25101816 + URR1A DNA MER1_type 79 226 0 3 1311 587 304 188 27 chr13 95182542 95183069 -25101243 - L1MC4 LINE L1 -4754 1461 850 3 1311 292 231 25 37 chr13 95183442 95183523 -25100789 - RSINE1 SINE B4 -4 161 82 3 1311 524 297 7 7 chr13 95183531 95183670 -25100642 - B4 SINE B4 -151 141 3 3 1311 24 0 0 0 chr13 95184043 95184067 -25100245 + AT_rich Low_complexity Low_complexity 1 24 0 3 1311 227 276 17 0 chr13 95184985 95185043 -25099269 + Charlie24 DNA MER1_type 1375 1433 -1017 3 1311 240 100 0 0 chr13 95186375 95186415 -25097897 + (T)n Simple_repeat Simple_repeat 1 40 0 3 1311 1219 63 0 0 chr13 95186415 95186558 -25097754 - B1_Mm SINE Alu 0 147 5 3 1311 28 61 0 0 chr13 95188519 95188568 -25095744 + AT_rich Low_complexity Low_complexity 1 49 0 3 1311 478 331 11 6 chr13 95188818 95188997 -25095315 + (TATG)n Simple_repeat Simple_repeat 1 180 0 3 1311 239 348 17 99 chr13 95189013 95189067 -25095245 - RSINE1 SINE B4 0 165 117 3 1311 315 0 0 0 chr13 95189067 95189102 -25095210 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1311 239 348 17 99 chr13 95189102 95189219 -25095093 - RSINE1 SINE B4 -49 116 9 3 1311 341 192 12 82 chr13 95189135 95189220 -25095092 - B3A SINE B2 -114 84 6 3 1311 207 0 0 0 chr13 95189288 95189311 -25095001 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1311 1694 32 5 0 chr13 95189366 95189553 -25094759 - B2_Mm1t SINE B2 -5 188 1 3 1311 1134 38 53 0 chr13 95189582 95189714 -25094598 + B1_Mus2 SINE Alu 2 140 -7 3 1311 225 94 0 0 chr13 95189715 95189747 -25094565 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 3 1311 1618 53 0 5 chr13 95190275 95190463 -25093849 - B2_Mm2 SINE B2 -7 188 2 3 1311 25 51 0 0 chr13 95191308 95191347 -25092965 + AT_rich Low_complexity Low_complexity 1 39 0 3 1311 460 241 101 79 chr13 95191865 95192054 -25092258 + B3A SINE B2 5 197 -1 3 1311 298 95 0 0 chr13 95192558 95192600 -25091712 + ORR1D1 LTR MaLR 330 371 -3 3 1311 309 114 0 0 chr13 95192603 95192647 -25091665 + ORR1D1-int LTR MaLR 1 44 -1326 3 1311 824 195 88 15 chr13 95192624 95192899 -25091413 - ORR1D1 LTR MaLR -15 359 2 3 1311 203 306 44 26 chr13 95192905 95193056 -25091256 - MIR SINE MIR -114 162 7 3 1311 271 241 71 24 chr13 95193303 95193388 -25090924 - B4A SINE B4 -192 100 12 3 1311 23 86 0 0 chr13 95194146 95194204 -25090108 + AT_rich Low_complexity Low_complexity 1 58 0 3 1311 255 31 0 0 chr13 95194296 95194328 -25089984 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 3 1311 330 267 210 36 chr13 95195439 95195691 -25088621 - L1MEg LINE L1 -4551 1533 1238 3 1311 257 91 0 43 chr13 95195793 95195839 -25088473 + (TCCC)n Simple_repeat Simple_repeat 1 44 0 3 1311 264 122 0 0 chr13 95195858 95195899 -25088413 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1311 552 332 50 4 chr13 95195901 95196161 -25088151 - Lx8 LINE L1 -375 7098 6827 4 1311 515 240 251 0 chr13 95196787 95196958 -25087354 - B3 SINE B2 0 216 3 4 1311 432 0 0 0 chr13 95197327 95197375 -25086937 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1311 500 299 95 62 chr13 95197419 95197861 -25086451 + L1M4 LINE L1 1299 1770 -4876 4 1311 433 237 21 0 chr13 95197903 95197996 -25086316 - B1_Mur4 SINE Alu 0 150 56 4 1311 736 112 9 3 chr13 95197997 95198112 -25086200 + B2_Mm2 SINE B2 1 120 -78 4 1311 358 214 0 0 chr13 95198162 95198218 -25086094 - B1_Mur4 SINE Alu -85 65 10 4 1311 295 286 0 0 chr13 95198165 95198228 -25086084 - ID_B1 SINE B4 -82 142 80 4 1311 719 176 44 30 chr13 95198778 95198913 -25085399 + B1F2 SINE Alu 3 139 -10 4 1311 651 26 0 0 chr13 95198918 95198995 -25085317 + (GA)n Simple_repeat Simple_repeat 1 77 0 4 1311 243 286 65 36 chr13 95199984 95200101 -25084211 + MLT1A0 LTR MaLR 2 131 -259 4 1311 1224 151 92 0 chr13 95200112 95200318 -25083994 - URR1A DNA MER1_type -1 225 1 4 1311 2377 72 12 109 chr13 95201314 95201434 -25082878 - MusHAL1 LINE L1 0 2712 2593 4 1311 1104 133 0 0 chr13 95201434 95201614 -25082698 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1311 2377 72 12 109 chr13 95201614 95201648 -25082664 - MusHAL1 LINE L1 -120 2592 2592 4 1311 1196 57 7 0 chr13 95201648 95201788 -25082524 - B1_Mus2 SINE Alu -5 142 2 4 1311 2377 72 12 109 chr13 95201788 95202037 -25082275 - MusHAL1 LINE L1 -120 2592 2347 4 1311 192 152 0 0 chr13 95202041 95202074 -25082238 + GA-rich Low_complexity Low_complexity 2 34 0 4 1311 756 0 0 0 chr13 95202089 95202173 -25082139 + (GGAGA)n Simple_repeat Simple_repeat 4 87 0 4 1311 316 279 222 12 chr13 95202179 95202346 -25081966 - L1MEg LINE L1 -808 5338 5137 4 1311 299 244 139 51 chr13 95202544 95202760 -25081552 - L1MEg LINE L1 -1036 5110 4876 4 1311 201 162 27 0 chr13 95203136 95203173 -25081139 + CT-rich Low_complexity Low_complexity 4 41 0 4 1311 261 0 0 0 chr13 95203185 95203214 -25081098 + (CCCCCG)n Simple_repeat Simple_repeat 2 30 0 4 1311 1759 224 30 6 chr13 95203216 95203579 -25080733 - ORR1D1 LTR MaLR -2 372 1 4 1311 1220 48 7 7 chr13 95203693 95203839 -25080473 + B1_Mm SINE Alu 2 147 0 4 1311 774 235 77 39 chr13 95203926 95204039 -25080273 - B3 SINE B2 0 216 94 4 1311 2981 132 58 20 chr13 95204039 95204541 -25079771 - RLTR28 LTR ERVL 0 524 4 4 1311 774 235 77 39 chr13 95204541 95204635 -25079677 - B3 SINE B2 -123 93 1 4 1311 514 322 53 19 chr13 95204649 95204855 -25079457 - B4A SINE B4 -78 214 2 4 1311 234 220 0 0 chr13 95205731 95205781 -25078531 - L1MEg LINE L1 -5338 904 855 4 1311 24 0 0 0 chr13 95206714 95206738 -25077574 + AT_rich Low_complexity Low_complexity 1 24 0 4 1311 220 296 138 9 chr13 95207130 95207239 -25077073 - B1_Mm SINE Alu -22 125 3 4 1311 821 262 33 0 chr13 95207348 95207562 -25076750 - ID_B1 SINE B4 0 224 4 4 1311 293 185 15 0 chr13 95207574 95207639 -25076673 + CT-rich Low_complexity Low_complexity 1 66 0 4 1311 543 256 114 17 chr13 95207650 95207825 -25076487 - B3A SINE B2 -6 192 1 4 1311 1022 133 72 6 chr13 95208093 95208274 -25076038 + B2_Mm2 SINE B2 2 194 -1 4 1311 959 176 7 0 chr13 95208315 95208463 -25075849 + B1_Mur4 SINE Alu 2 150 0 4 1311 282 243 13 13 chr13 95208617 95208692 -25075620 - L1MD2 LINE L1 -363 5996 5922 4 1311 287 209 0 15 chr13 95208695 95208763 -25075549 + PB1D10 SINE Alu 33 99 -18 4 1311 268 216 27 0 chr13 95208909 95208983 -25075329 - L1MDa LINE L1 -3994 2639 2564 4 1311 297 0 0 0 chr13 95209128 95209161 -25075151 + (CACCC)n Simple_repeat Simple_repeat 4 36 0 4 1311 238 263 146 41 chr13 95209188 95209247 -25075065 - Tigger7 DNA MER2_type -2355 136 75 4 1311 309 51 0 0 chr13 95209247 95209286 -25075026 + (TG)n Simple_repeat Simple_repeat 1 39 0 4 1311 238 263 146 41 chr13 95209286 95209349 -25074963 - Tigger7 DNA MER2_type -2417 74 2 4 1311 270 0 0 0 chr13 95209418 95209448 -25074864 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 4 1311 548 261 174 36 chr13 95209869 95210088 -25074224 - B4 SINE B4 0 292 44 4 1311 201 74 0 0 chr13 95210251 95210278 -25074034 + (GGA)n Simple_repeat Simple_repeat 2 28 0 4 1311 620 234 233 6 chr13 95211232 95211404 -25072908 - B3 SINE B2 -5 211 1 4 1311 488 236 59 68 chr13 95212059 95212177 -25072135 + PB1D9 SINE Alu 2 118 -2 4 1311 180 0 0 0 chr13 95212489 95212509 -25071803 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 4 1311 217 178 22 22 chr13 95213564 95213610 -25070702 + CT-rich Low_complexity Low_complexity 4 49 0 4 1311 261 83 0 0 chr13 95213780 95213816 -25070496 + (CGAG)n Simple_repeat Simple_repeat 2 37 0 4 1311 198 191 0 0 chr13 95214572 95214614 -25069698 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1311 655 311 67 74 chr13 95214616 95214901 -25069411 - B4A SINE B4 0 292 10 4 1311 1248 61 0 13 chr13 95216257 95216406 -25067906 + B1_Mus1 SINE Alu 2 148 0 4 1311 207 0 0 0 chr13 95216406 95216429 -25067883 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1311 307 321 67 169 chr13 95217401 95217626 -25066686 + ID_B1 SINE B4 11 212 -12 4 1311 277 222 58 0 chr13 95217723 95217865 -25066447 - L1MEf LINE L1 -3912 2407 2252 4 1311 23 0 0 0 chr13 95218293 95218316 -25065996 + AT_rich Low_complexity Low_complexity 1 23 0 4 1311 401 202 13 0 chr13 95218939 95219018 -25065294 + RSINE1 SINE B4 23 102 -63 4 1311 902 91 45 0 chr13 95219206 95219338 -25064974 - URR1B DNA MER1_type 0 225 88 4 1311 516 111 0 0 chr13 95219361 95219451 -25064861 + (CA)n Simple_repeat Simple_repeat 2 91 0 4 1311 485 115 0 13 chr13 95222006 95222085 -25062227 - L1_Mus1 LINE L1 -6 6561 6484 4 1311 790 78 0 10 chr13 95222204 95222301 -25062011 - L1_Mus1 LINE L1 -318 6249 6153 4 1311 2695 56 0 15 chr13 95222299 95222626 -25061686 + L1_Mus1 LINE L1 6244 6565 -2 4 1311 25 31 0 0 chr13 95223017 95223049 -25061263 + AT_rich Low_complexity Low_complexity 1 32 0 4 1311 21 0 0 0 chr13 95223933 95223954 -25060358 + AT_rich Low_complexity Low_complexity 1 21 0 4 1311 467 333 102 4 chr13 95224150 95224415 -25059897 + B4A SINE B4 2 292 0 4 1311 288 269 26 90 chr13 95225672 95225827 -25058485 + L1MC4 LINE L1 6637 6781 -1261 4 1311 378 228 125 8 chr13 95225963 95226091 -25058221 - L1MB7 LINE L1 -188 5996 5854 4 1311 231 277 15 0 chr13 95226139 95226204 -25058108 - RSINE1 SINE B4 -6 159 94 4 1311 26 50 0 0 chr13 95227368 95227408 -25056904 + AT_rich Low_complexity Low_complexity 1 40 0 4 1311 455 256 124 0 chr13 95227599 95227736 -25056576 + B3A SINE B2 1 154 -44 4 1311 399 264 19 19 chr13 95227841 95227949 -25056363 + RSINE1 SINE B4 49 156 -9 4 1311 182 91 0 29 chr13 95227963 95227997 -25056315 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 4 1311 23 78 0 0 chr13 95230432 95230483 -25053829 + AT_rich Low_complexity Low_complexity 1 51 0 4 1311 25 31 0 0 chr13 95230844 95230876 -25053436 + AT_rich Low_complexity Low_complexity 1 32 0 4 1311 22 0 0 0 chr13 95231306 95231328 -25052984 + AT_rich Low_complexity Low_complexity 1 22 0 4 1311 188 238 0 0 chr13 95231618 95231660 -25052652 + L4 LINE RTE 1988 2029 0 4 1311 22 0 0 0 chr13 95231776 95231798 -25052514 + AT_rich Low_complexity Low_complexity 1 22 0 4 1311 974 233 0 0 chr13 95231986 95232188 -25052124 - B3 SINE B2 -6 210 9 4 1311 22 35 0 0 chr13 95233512 95233541 -25050771 + AT_rich Low_complexity Low_complexity 1 29 0 4 1311 615 282 47 69 chr13 95233598 95233830 -25050482 + B4 SINE B4 1 227 -65 4 1311 224 229 0 20 chr13 95233906 95233955 -25050357 + CT-rich Low_complexity Low_complexity 3 50 0 4 1311 234 305 17 0 chr13 95233992 95234051 -25050261 + B4 SINE B4 215 274 -18 4 1311 186 43 0 0 chr13 95234073 95234096 -25050216 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1311 348 24 0 0 chr13 95234096 95234136 -25050176 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1311 295 314 21 28 chr13 95234516 95234657 -25049655 + L1MEa LINE L1 465 604 -5490 4 1311 236 241 195 27 chr13 95234719 95234868 -25049444 + L1MB5 LINE L1 6001 6174 0 4 1311 335 294 39 27 chr13 95234876 95235080 -25049232 + L1MEa LINE L1 678 885 -5315 4 1311 260 253 47 35 chr13 95235163 95235249 -25049063 + B1_Mur1 SINE Alu 42 129 -21 4 1311 636 107 0 0 chr13 95235763 95235866 -25048446 + (TG)n Simple_repeat Simple_repeat 1 103 0 4 1311 338 350 127 22 chr13 95236440 95236896 -25047416 - Tigger9b DNA MER2_type -17 607 104 4 1311 447 167 48 14 chr13 95237972 95238118 -25046194 + CT-rich Low_complexity Low_complexity 1 151 0 4 1311 292 282 0 0 chr13 95238155 95238226 -25046086 + ID4 SINE ID 2 72 -11 4 1311 898 29 0 0 chr13 95239323 95239426 -25044886 - L1_Mm LINE L1 -110 5773 5671 4 1311 270 0 0 0 chr13 95239427 95239457 -25044855 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1311 442 288 14 82 chr13 95239464 95239672 -25044640 + B4A SINE B4 99 292 0 4 1311 255 247 245 45 chr13 95239699 95240013 -25044299 + BLACKJACK DNA AcHobo 2445 2821 -123 4 1311 210 91 0 0 chr13 95244011 95244044 -25040268 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 4 1311 834 162 28 14 chr13 95244045 95244189 -25040123 - B1_Mm SINE Alu -1 146 1 4 1311 229 316 91 10 chr13 95244192 95244291 -25040021 - MIRb SINE MIR -113 155 49 4 1311 696 264 15 15 chr13 95244413 95244609 -25039703 + B4A SINE B4 3 198 -94 4 1311 22 88 0 0 chr13 95246052 95246109 -25038203 + AT_rich Low_complexity Low_complexity 1 57 0 4 1311 477 110 0 0 chr13 95246179 95246252 -25038060 + (CA)n Simple_repeat Simple_repeat 1 73 0 4 1311 312 152 0 0 chr13 95246989 95247055 -25037257 + GA-rich Low_complexity Low_complexity 2 67 0 4 1311 264 59 0 0 chr13 95247276 95247310 -25037002 + B1_Mus1 SINE Alu 24 57 -91 4 1311 353 212 25 8 chr13 95247319 95247438 -25036874 + GA-rich Low_complexity Low_complexity 1 121 0 4 1311 272 179 0 0 chr13 95247446 95247502 -25036810 + B1_Mus2 SINE Alu 89 144 -3 4 1311 479 43 0 28 chr13 95247502 95247573 -25036739 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 4 1311 408 67 0 0 chr13 95247759 95247819 -25036493 + (TTTTG)n Simple_repeat Simple_repeat 2 61 0 5 1311 1271 20 7 0 chr13 95247825 95247971 -25036341 - B1_Mus1 SINE Alu 0 148 2 5 1311 370 266 147 73 chr13 95248487 95248678 -25035634 - B4A SINE B4 -86 206 2 5 1311 186 280 211 2 chr13 95248819 95248918 -25035394 - MIRb SINE MIR -101 167 52 5 1311 426 188 76 38 chr13 95249049 95249154 -25035158 - PB1D10 SINE Alu -8 109 1 5 1311 226 234 139 25 chr13 95249154 95249185 -25035127 - B4 SINE B4 -200 92 53 5 1311 441 116 0 0 chr13 95251738 95251807 -25032505 + (TG)n Simple_repeat Simple_repeat 1 69 0 5 1311 452 227 126 55 chr13 95251809 95251991 -25032321 - B3 SINE B2 -17 199 5 5 1311 376 186 47 0 chr13 95252457 95252543 -25031769 + PB1D10 SINE Alu 9 98 -19 5 1311 352 314 19 19 chr13 95252889 95253048 -25031264 - RSINE1 SINE B4 -4 161 3 5 1311 496 231 18 125 chr13 95253392 95253560 -25030752 + B1_Mur4 SINE Alu 1 150 0 5 1311 727 173 18 12 chr13 95253591 95253755 -25030557 - RLTR22_Mur LTR ERVK -11 1837 1673 5 1311 3866 158 48 20 chr13 95253984 95254767 -25029545 - RLTR22_Mur LTR ERVK -1043 805 1 5 1311 1404 75 11 0 chr13 95255492 95255680 -25028632 + B2_Mm1t SINE B2 2 191 -2 5 1311 237 163 0 0 chr13 95256275 95256324 -25027988 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1311 430 143 0 0 chr13 95256788 95256875 -25027437 - B1_Mur3 SINE Alu 0 149 63 5 1311 1482 96 19 0 chr13 95257203 95257412 -25026900 - L1_Mus1 LINE L1 0 6567 6355 5 1311 591 253 109 0 chr13 95258434 95258608 -25025704 - B3A SINE B2 -5 193 1 5 1311 754 313 17 44 chr13 95259120 95259417 -25024895 - B4A SINE B4 -2 290 2 5 1311 570 159 0 0 chr13 95261932 95262039 -25022273 + (TG)n Simple_repeat Simple_repeat 1 107 0 5 1311 610 229 79 62 chr13 95262039 95262216 -25022096 - B3A SINE B2 -16 182 3 5 1311 520 276 240 18 chr13 95262641 95262866 -25021446 - B4A SINE B4 -12 280 6 5 1311 1033 118 0 0 chr13 95265308 95265452 -25018860 + B1_Mur3 SINE Alu 1 144 -5 5 1311 734 158 55 9 chr13 95265465 95265648 -25018664 + B3 SINE B2 2 185 -10 5 1311 2784 19 3 0 chr13 95265657 95265972 -25018340 + L1Md_F2 LINE L1 5271 5586 -297 5 1311 8502 39 0 1 chr13 95265972 95266969 -25017343 + L1Md_F2 LINE L1 5587 6582 0 5 1311 668 160 0 56 chr13 95267125 95267251 -25017061 - B1_Mus1 SINE Alu 0 148 30 5 1311 237 33 0 0 chr13 95267871 95267901 -25016411 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1311 1163 68 7 0 chr13 95267901 95268048 -25016264 - B1_Mus1 SINE Alu 0 148 1 5 1311 644 201 29 22 chr13 95269197 95269334 -25014978 - B1_Mur1 SINE Alu -6 143 6 5 1311 216 162 0 0 chr13 95269505 95269542 -25014770 + C-rich Low_complexity Low_complexity 1 37 0 5 1311 767 319 96 53 chr13 95269543 95269940 -25014372 - MT2A LTR ERVL -119 414 1 5 1311 220 280 118 27 chr13 95270244 95270354 -25013958 + ID_B1 SINE B4 1 120 -104 5 1311 435 38 0 0 chr13 95270405 95270458 -25013854 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1311 939 73 15 7 chr13 95271282 95271419 -25012893 + B1_Mm SINE Alu 9 146 -1 5 1311 183 26 0 93 chr13 95271586 95271629 -25012683 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1311 22 0 0 0 chr13 95273016 95273038 -25011274 + AT_rich Low_complexity Low_complexity 1 22 0 5 1311 3064 49 26 8 chr13 95273045 95273434 -25010878 - MTA_Mm LTR MaLR 0 396 1 5 1311 491 271 43 7 chr13 95274383 95274524 -25009788 + B4A SINE B4 3 148 -144 5 1311 251 247 45 45 chr13 95274982 95275071 -25009241 - MER77 LTR ERVL -13 594 506 5 1311 200 163 47 0 chr13 95277375 95277418 -25006894 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 5 1311 495 0 0 0 chr13 95277430 95277485 -25006827 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1311 216 0 0 0 chr13 95278086 95278110 -25006202 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 5 1311 570 312 25 25 chr13 95279418 95279579 -25004733 + RSINE1 SINE B4 5 165 0 5 1311 243 0 0 0 chr13 95279673 95279700 -25004612 + (GA)n Simple_repeat Simple_repeat 1 27 0 5 1311 466 125 22 11 chr13 95283171 95283260 -25001052 + CT-rich Low_complexity Low_complexity 2 91 0 5 1311 352 200 0 23 chr13 95283834 95283921 -25000391 + PB1D10 SINE Alu 27 111 -6 5 1311 993 116 0 7 chr13 95284516 95284664 -24999648 - B1_Mus1 SINE Alu -1 147 1 5 1311 477 244 84 146 chr13 95285306 95285532 -24998780 - B3 SINE B2 -4 212 1 5 1311 341 318 15 58 chr13 95285559 95285696 -24998616 - MLT1D LTR MaLR -89 416 286 5 1311 279 324 20 0 chr13 95287466 95287568 -24996744 - MIRc SINE MIR -37 231 128 5 1311 419 250 12 0 chr13 95287693 95287777 -24996535 - B1F2 SINE Alu -18 131 47 5 1311 760 278 94 42 chr13 95287918 95288080 -24996232 + Lx8 LINE L1 6857 7022 -451 5 1311 1267 47 0 0 chr13 95288080 95288228 -24996084 + B1_Mus1 SINE Alu 1 148 0 5 1311 760 278 94 42 chr13 95288228 95288470 -24995842 + Lx8 LINE L1 7023 7282 -191 5 1312 241 242 248 8 chr13 95289781 95289910 -24994402 - Lx6 LINE L1 -1 7459 7300 5 1312 402 74 0 0 chr13 95289923 95289977 -24994335 + (CAGA)n Simple_repeat Simple_repeat 2 55 0 5 1312 849 228 155 8 chr13 95289977 95290216 -24994096 - Lx7 LINE L1 -357 7339 7066 5 1312 1648 204 122 24 chr13 95290231 95290698 -24993614 + RMER13A LTR ERVK 348 860 0 5 1312 659 286 25 12 chr13 95290698 95290939 -24993373 + L1M3 LINE L1 4470 4713 -1427 5 1312 1057 260 128 9 chr13 95290945 95291391 -24992921 + L1_Mur3 LINE L1 3379 3877 -2003 5 1312 227 162 0 0 chr13 95291658 95291695 -24992617 - ID4 SINE ID -46 37 1 5 1312 21 0 0 0 chr13 95291780 95291801 -24992511 + GC_rich Low_complexity Low_complexity 1 21 0 5 1312 1007 221 9 9 chr13 95292030 95292245 -24992067 - B3 SINE B2 0 216 2 5 1312 745 150 276 40 chr13 95293725 95293899 -24990413 + B3 SINE B2 2 216 0 5 1312 387 0 0 0 chr13 95294096 95294139 -24990173 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1312 30 27 0 0 chr13 95294410 95294447 -24989865 + AT_rich Low_complexity Low_complexity 1 37 0 5 1312 551 203 94 0 chr13 95294453 95294581 -24989731 + B1_Mur1 SINE Alu 2 141 -8 5 1312 425 298 75 52 chr13 95294670 95295088 -24989224 - L2a LINE L2 -273 3153 2727 5 1312 222 379 19 0 chr13 95296031 95296134 -24988178 - PB1D10 SINE Alu -7 110 6 5 1312 257 293 26 168 chr13 95296708 95296796 -24987516 - MTEb LTR MaLR 0 379 320 5 1312 1458 58 26 5 chr13 95296796 95296986 -24987326 + B2_Mm2 SINE B2 1 194 -1 5 1312 257 293 26 168 chr13 95296986 95297123 -24987189 - MTEb LTR MaLR -60 319 186 5 1312 299 264 23 0 chr13 95297308 95297395 -24986917 + PB1D10 SINE Alu 14 102 -15 5 1312 228 246 0 0 chr13 95297641 95297700 -24986612 + B1F SINE Alu 47 137 -12 5 1312 545 118 304 18 chr13 95297826 95297938 -24986374 - B1_Mur4 SINE Alu -4 146 3 5 1312 205 243 0 0 chr13 95298463 95298500 -24985812 + G-rich Low_complexity Low_complexity 3 39 0 5 1312 234 0 0 0 chr13 95298500 95298526 -24985786 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 5 1312 1278 27 0 0 chr13 95298614 95298761 -24985551 - B1_Mus2 SINE Alu 0 147 1 5 1312 308 179 155 0 chr13 95299477 95299561 -24984751 + ID_B1 SINE B4 123 219 -5 5 1312 198 0 0 0 chr13 95301264 95301286 -24983026 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1312 432 0 0 0 chr13 95301286 95301333 -24982979 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1312 606 237 7 28 chr13 95301381 95301524 -24982788 - ORR1D1 LTR MaLR 0 374 235 5 1312 33 25 0 0 chr13 95302262 95302302 -24982010 + AT_rich Low_complexity Low_complexity 1 40 0 5 1312 630 234 29 0 chr13 95304311 95304448 -24979864 + B1_Mus1 SINE Alu 1 141 -7 5 1312 240 154 0 0 chr13 95304449 95304501 -24979811 + (CTAA)n Simple_repeat Simple_repeat 1 52 0 5 1312 677 241 42 26 chr13 95306781 95306973 -24977339 + B3 SINE B2 3 197 -19 5 1312 21 36 0 0 chr13 95306973 95307001 -24977311 + AT_rich Low_complexity Low_complexity 1 28 0 5 1312 31 0 0 0 chr13 95308522 95308553 -24975759 + AT_rich Low_complexity Low_complexity 1 31 0 5 1312 6986 73 13 8 chr13 95308560 95309503 -24974809 - L1Md_F2 LINE L1 -10 6572 5662 5 1312 248 316 41 0 chr13 95310338 95310436 -24973876 + MIRb SINE MIR 1 102 -166 5 1312 278 229 393 36 chr13 95310764 95310904 -24973408 + B3A SINE B2 5 194 -4 5 1312 258 282 25 13 chr13 95311448 95311527 -24972785 + BC1_Mm scRNA scRNA 7 86 -66 5 1312 426 247 65 32 chr13 95311773 95311928 -24972384 + MLT1J LTR MaLR 240 399 -113 5 1312 308 292 35 26 chr13 95312397 95312513 -24971799 + PB1D10 SINE Alu 1 117 0 5 1312 22 0 0 0 chr13 95316987 95317009 -24967303 + AT_rich Low_complexity Low_complexity 1 22 0 5 1312 230 208 127 25 chr13 95320636 95320715 -24963597 + B1F SINE Alu 30 116 -33 5 1312 1643 115 62 3 chr13 95320973 95321262 -24963050 + RLTR15 LTR ERVK 54 359 0 5 1312 528 272 45 18 chr13 95321364 95321585 -24962727 - MYSERV16_I-int LTR ERVK -3 2323 2097 5 1312 4540 6 2 0 chr13 95321585 95322077 -24962235 - MT2_Mm LTR ERVL 0 493 1 5 1312 321 0 0 0 chr13 95322077 95322115 -24962197 - MERVL-int LTR ERVL 0 5485 5448 5 1312 331 191 46 35 chr13 95322115 95322202 -24962110 - ORR1A3-int LTR MaLR -1323 640 553 5 1312 48558 14 6 0 chr13 95322202 95327528 -24956784 - MERVL-int LTR ERVL -125 5360 1 5 1312 3802 9 123 0 chr13 95327528 95327967 -24956345 - MT2_Mm LTR ERVL 0 493 1 5 1312 3513 219 63 74 chr13 95327993 95329101 -24955211 - MYSERV16_I-int LTR ERVK -271 2055 960 5 1312 206 121 0 29 chr13 95329106 95329140 -24955172 + GA-rich Low_complexity Low_complexity 4 36 0 5 1312 289 281 9 80 chr13 95329144 95329256 -24955056 - RMER4A LTR ERVK -76 390 287 5 1312 1028 264 60 62 chr13 95329256 95329676 -24954636 - MYSERV16_I-int LTR ERVK -1430 896 478 5 1312 459 155 160 28 chr13 95329724 95329830 -24954482 - PB1D7 SINE Alu 0 120 1 5 1312 247 304 26 17 chr13 95332212 95332329 -24951983 + MIRc SINE MIR 21 138 -130 6 1312 604 302 17 0 chr13 95333386 95333565 -24950747 + B3A SINE B2 1 182 -16 6 1312 291 135 0 0 chr13 95333705 95333740 -24950572 + (TA)n Simple_repeat Simple_repeat 1 35 0 6 1312 423 0 0 0 chr13 95333740 95333787 -24950525 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1312 291 135 0 0 chr13 95333787 95333803 -24950509 + (TA)n Simple_repeat Simple_repeat 1 16 0 6 1312 331 206 82 0 chr13 95336364 95336461 -24947851 - PB1D9 SINE Alu -1 119 15 6 1312 498 252 17 34 chr13 95336837 95336956 -24947356 - B1F2 SINE Alu -32 117 1 6 1312 703 168 8 0 chr13 95336982 95337101 -24947211 + B1_Mur3 SINE Alu 1 120 -29 6 1312 230 290 14 0 chr13 95337215 95337284 -24947028 - AluF_3 SINE Alu -103 208 139 6 1312 300 239 204 13 chr13 95337305 95337462 -24946850 - B2_Mm2 SINE B2 -5 190 4 6 1312 275 185 111 0 chr13 95337630 95337684 -24946628 + B1F SINE Alu 20 79 -70 6 1312 821 196 142 15 chr13 95338330 95338451 -24945861 + URR1B DNA MER1_type 2 133 -92 6 1312 650 186 123 18 chr13 95338451 95338621 -24945691 + B2_Mm2 SINE B2 5 192 -3 6 1312 821 196 142 15 chr13 95338621 95338696 -24945616 + URR1B DNA MER1_type 134 223 -2 6 1312 285 291 66 85 chr13 95338699 95338973 -24945339 + RSINE1 SINE B4 39 281 -11 6 1312 510 236 143 6 chr13 95339121 95339296 -24945016 + MTD LTR MaLR 221 419 0 6 1312 189 171 0 0 chr13 95340122 95340157 -24944155 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1312 549 254 23 0 chr13 95340159 95340289 -24944023 + RSINE1 SINE B4 3 135 -30 6 1312 877 181 209 0 chr13 95340314 95340491 -24943821 + B3 SINE B2 1 214 -2 6 1312 342 98 0 0 chr13 95340692 95340743 -24943569 + (TCCC)n Simple_repeat Simple_repeat 1 51 0 6 1312 2831 81 10 5 chr13 95341358 95341743 -24942569 + L1_Mus3 LINE L1 6251 6637 -1 6 1312 292 261 36 44 chr13 95342181 95342271 -24942041 + ID4 SINE ID 5 98 -54 6 1312 297 167 0 0 chr13 95342271 95342325 -24941987 + GA-rich Low_complexity Low_complexity 2 55 0 6 1312 637 307 89 25 chr13 95342692 95343033 -24941279 + Lx8 LINE L1 6963 7310 -334 6 1312 234 128 0 0 chr13 95343201 95343240 -24941072 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 6 1312 187 232 0 24 chr13 95343240 95343324 -24940988 + (TA)n Simple_repeat Simple_repeat 2 83 0 6 1312 237 329 67 45 chr13 95346041 95346219 -24938093 - LTR9 LTR ERV1 -339 273 92 6 1312 222 91 0 0 chr13 95346499 95346532 -24937780 + (G)n Simple_repeat Simple_repeat 1 33 0 6 1312 357 340 0 19 chr13 95350215 95350323 -24933989 + MTEa LTR MaLR 2 107 -252 6 1312 1716 170 63 8 chr13 95350323 95350674 -24933638 + ORR1D1 LTR MaLR 1 416 -5 6 1312 474 281 42 42 chr13 95350717 95350884 -24933428 + MTEa LTR MaLR 206 372 -7 6 1312 476 296 24 8 chr13 95350909 95351035 -24933277 + RSINE1 SINE B4 38 165 0 6 1312 488 59 15 0 chr13 95351259 95351327 -24932985 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 6 1312 477 90 0 0 chr13 95351429 95351496 -24932816 + (TAAA)n Simple_repeat Simple_repeat 3 69 0 6 1312 387 0 0 0 chr13 95351601 95351644 -24932668 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 6 1312 761 247 32 53 chr13 95353132 95353320 -24930992 + ID_B1 SINE B4 32 215 -9 6 1312 393 117 0 0 chr13 95353326 95353386 -24930926 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1312 183 80 0 0 chr13 95355870 95355895 -24928417 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 6 1312 1452 64 26 5 chr13 95355895 95356084 -24928228 - B2_Mm2 SINE B2 -1 194 2 6 1312 307 206 0 99 chr13 95356587 95356668 -24927644 + B1_Mus2 SINE Alu 1 73 -74 6 1312 333 235 221 62 chr13 95356666 95356811 -24927501 + B3A SINE B2 30 197 -1 6 1312 1302 137 5 0 chr13 95356923 95357113 -24927199 + URR1B DNA MER1_type 25 215 -10 6 1312 443 231 66 22 chr13 95357113 95357250 -24927062 + L1ME1 LINE L1 5391 5533 -911 6 1312 361 242 0 10 chr13 95357397 95357497 -24926815 + L1ME1 LINE L1 5847 5945 -234 6 1312 437 269 62 67 chr13 95357500 95357523 -24926789 + MLT1D LTR MaLR 103 131 -374 6 1312 1189 29 0 0 chr13 95357523 95357659 -24926653 + B1_Mus2 SINE Alu 2 137 -10 6 1312 271 0 0 49 chr13 95357659 95357700 -24926612 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1312 437 279 88 78 chr13 95357700 95358042 -24926270 + MLT1D LTR MaLR 132 467 0 6 1312 309 286 0 49 chr13 95361023 95361104 -24923208 - ID4_ SINE ID -6 77 1 6 1312 1235 48 0 0 chr13 95361229 95361376 -24922936 - B1_Mus2 SINE Alu 0 147 1 6 1312 2619 158 155 54 chr13 95361872 95362427 -24921885 - RMER19C LTR ERVK 0 611 1 6 1312 207 0 0 0 chr13 95362687 95362710 -24921602 + (TC)n Simple_repeat Simple_repeat 1 23 0 6 1312 306 270 82 82 chr13 95362717 95362814 -24921498 - PB1D10 SINE Alu 0 117 21 6 1312 471 270 17 0 chr13 95362821 95362936 -24921376 - PB1D9 SINE Alu -2 118 2 6 1312 31 0 0 0 chr13 95362942 95362973 -24921339 + AT_rich Low_complexity Low_complexity 1 31 0 6 1312 384 22 0 0 chr13 95364042 95364087 -24920225 + (CA)n Simple_repeat Simple_repeat 1 45 0 6 1312 32 0 0 0 chr13 95365048 95365080 -24919232 + AT_rich Low_complexity Low_complexity 1 32 0 6 1312 223 152 43 21 chr13 95368333 95368380 -24915932 - MIRc SINE MIR -128 140 93 6 1312 405 0 0 0 chr13 95368383 95368428 -24915884 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1312 644 37 0 0 chr13 95368439 95368520 -24915792 - B1_Mus1 SINE Alu -66 82 2 6 1312 312 259 0 0 chr13 95368664 95368722 -24915590 + ID4 SINE ID 23 80 -3 6 1312 312 239 14 0 chr13 95368755 95368826 -24915486 - ID4 SINE ID -9 74 3 6 1312 1151 61 0 13 chr13 95369240 95369389 -24914923 + B1_Mus2 SINE Alu 1 147 0 6 1312 373 332 105 61 chr13 95369392 95369735 -24914577 + Charlie13a DNA Charlie 836 1193 -321 6 1312 790 186 0 0 chr13 95370363 95370492 -24913820 - B1_Mur3 SINE Alu -19 130 2 6 1312 298 42 20 20 chr13 95371128 95371177 -24913135 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 6 1312 728 281 107 13 chr13 95372067 95372301 -24912011 - B4 SINE B4 -3 289 34 6 1312 327 264 45 11 chr13 95372307 95372395 -24911917 + L2a LINE L2 3336 3426 0 6 1312 884 237 19 42 chr13 95372620 95372836 -24911476 + B3 SINE B2 1 211 -5 6 1312 227 31 0 30 chr13 95373227 95373260 -24911052 + (TCC)n Simple_repeat Simple_repeat 3 34 0 6 1312 387 321 21 38 chr13 95373377 95373549 -24910763 - MIRc SINE MIR -79 189 27 6 1312 210 37 0 0 chr13 95377452 95377479 -24906833 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 6 1312 1030 49 0 112 chr13 95379579 95379740 -24904572 - B1_Mus1 SINE Alu 0 148 6 6 1312 403 150 69 172 chr13 95379611 95379756 -24904556 - MT2B LTR ERVL -320 281 152 6 1312 409 238 198 38 chr13 95379925 95380082 -24904230 - MER20B DNA MER1_type -335 448 267 6 1312 440 271 198 0 chr13 95380232 95380263 -24904049 - B3 SINE B2 -3 213 183 6 1312 369 109 0 0 chr13 95380263 95380318 -24903994 + (TATG)n Simple_repeat Simple_repeat 4 58 0 6 1312 440 271 198 0 chr13 95380318 95380463 -24903849 - B3 SINE B2 -34 182 3 6 1312 1813 138 122 0 chr13 95380821 95381140 -24903172 + ORR1B2 LTR MaLR 1 358 -9 6 1312 1025 89 0 27 chr13 95383436 95383621 -24900691 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1312 275 240 0 0 chr13 95383687 95383737 -24900575 - B4 SINE B4 -160 132 83 6 1312 1277 90 22 11 chr13 95383910 95384089 -24900223 + B2_Mm2 SINE B2 1 181 -14 6 1312 201 147 0 0 chr13 95385532 95385566 -24898746 + (TAA)n Simple_repeat Simple_repeat 1 34 0 6 1312 758 48 10 0 chr13 95385577 95385680 -24898632 + (TCCC)n Simple_repeat Simple_repeat 3 106 0 6 1312 329 176 88 0 chr13 95385694 95385762 -24898550 - ID_B1 SINE B4 -21 203 130 6 1312 249 57 0 0 chr13 95385813 95385848 -24898464 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1312 1229 48 0 0 chr13 95385852 95385999 -24898313 - B1_Mus2 SINE Alu 0 147 1 6 1312 1460 292 39 4 chr13 95386016 95386501 -24897811 - L1_Mur3 LINE L1 -443 5437 4936 6 1312 2552 279 72 20 chr13 95386502 95387369 -24896943 + Lx8 LINE L1 6282 7193 -280 6 1312 235 289 56 78 chr13 95387373 95387553 -24896759 + Lx8 LINE L1 7296 7471 -2 6 1312 419 65 32 0 chr13 95387568 95387630 -24896682 + (TTTC)n Simple_repeat Simple_repeat 1 64 0 6 1312 1294 73 0 0 chr13 95387654 95387818 -24896494 - B2_Mm2 SINE B2 -31 164 1 6 1312 27 0 0 0 chr13 95389352 95389379 -24894933 + AT_rich Low_complexity Low_complexity 1 27 0 6 1312 362 125 48 20 chr13 95390051 95390198 -24894114 + (TG)n Simple_repeat Simple_repeat 2 152 0 6 1312 26 30 0 0 chr13 95390254 95390287 -24894025 + AT_rich Low_complexity Low_complexity 1 33 0 6 1312 375 23 0 0 chr13 95390441 95390485 -24893827 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1312 1102 244 107 17 chr13 95390835 95391190 -24893122 - L1MB5 LINE L1 0 6174 5788 6 1312 1445 66 16 0 chr13 95391393 95391576 -24892736 - B2_Mm2 SINE B2 -9 186 1 6 1312 337 272 60 36 chr13 95391751 95391919 -24892393 - L1MC3 LINE L1 -633 7152 6981 6 1312 368 268 9 9 chr13 95392233 95392346 -24891966 + PB1D10 SINE Alu 5 117 0 6 1312 391 304 60 34 chr13 95392372 95392638 -24891674 + L1MEg LINE L1 1165 1437 -4647 6 1312 450 269 0 0 chr13 95392678 95392786 -24891526 - PB1D10 SINE Alu -5 112 5 6 1312 1103 75 0 7 chr13 95392838 95392986 -24891326 + B1_Mus2 SINE Alu 1 147 0 6 1312 206 171 0 24 chr13 95393092 95393134 -24891178 + A-rich Low_complexity Low_complexity 5 45 0 6 1312 1389 76 38 0 chr13 95393158 95393342 -24890970 + B2_Mm2 SINE B2 5 195 0 6 1312 219 36 0 0 chr13 95393346 95393374 -24890938 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6 1312 217 257 13 39 chr13 95393376 95393453 -24890859 + PB1D10 SINE Alu 43 117 0 7 1312 233 102 49 33 chr13 95393689 95393750 -24890562 + (TTATA)n Simple_repeat Simple_repeat 5 66 0 7 1312 222 300 88 26 chr13 95393978 95394091 -24890221 + L3 LINE CR1 4204 4323 -166 7 1312 199 259 69 0 chr13 95394159 95394217 -24890095 - MER5A DNA MER1_type -10 179 118 7 1312 213 333 84 15 chr13 95394167 95394298 -24890014 + MER5A DNA MER1_type 34 173 -16 7 1312 234 0 0 0 chr13 95394832 95394858 -24889454 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1312 237 309 50 12 chr13 95394956 95395061 -24889251 - ID4_ SINE ID -41 111 7 7 1312 296 304 65 0 chr13 95395077 95395089 -24889223 - PB1D10 SINE Alu -12 105 8 7 1312 311 275 38 0 chr13 95395089 95395169 -24889143 - ID_B1 SINE B4 -53 171 89 7 1312 845 300 92 10 chr13 95395188 95395579 -24888733 - L1MB5 LINE L1 -8 6166 5744 7 1312 314 151 23 0 chr13 95395625 95395711 -24888601 + T-rich Low_complexity Low_complexity 2 89 0 7 1312 351 0 0 0 chr13 95396971 95397010 -24887302 + (TC)n Simple_repeat Simple_repeat 1 39 0 7 1312 262 354 20 0 chr13 95397013 95397112 -24887200 - PB1D10 SINE Alu -16 101 1 7 1312 772 151 87 0 chr13 95397228 95397354 -24886958 + B1_Mur4 SINE Alu 1 137 -13 7 1312 513 0 0 0 chr13 95397356 95397413 -24886899 + (GA)n Simple_repeat Simple_repeat 1 57 0 7 1312 270 263 0 17 chr13 95397432 95397490 -24886822 + Lx8 LINE L1 7271 7327 -146 7 1312 561 68 0 0 chr13 95397922 95397996 -24886316 + (TG)n Simple_repeat Simple_repeat 1 74 0 7 1312 228 67 0 0 chr13 95398144 95398174 -24886138 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1312 207 0 0 0 chr13 95398231 95398254 -24886058 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1312 518 286 0 0 chr13 95399278 95399404 -24884908 - B4 SINE B4 -19 273 148 7 1312 1728 127 33 122 chr13 95400567 95400927 -24883385 - ORR1A4 LTR MaLR 0 329 2 7 1312 872 226 42 30 chr13 95401038 95401275 -24883037 - L1_Rod LINE L1 -819 5028 4789 7 1312 527 228 8 24 chr13 95401273 95401399 -24882913 - L1_Rod LINE L1 -6976 196 73 7 1312 32 26 0 0 chr13 95401454 95401493 -24882819 + AT_rich Low_complexity Low_complexity 1 39 0 7 1312 925 193 11 0 chr13 95401872 95402048 -24882264 + URR1B DNA MER1_type 6 183 -42 7 1312 659 114 6 35 chr13 95402048 95402220 -24882092 + (CA)n Simple_repeat Simple_repeat 2 168 0 7 1312 373 287 43 0 chr13 95402365 95402480 -24881832 + B1F SINE Alu 18 137 -12 7 1312 420 20 0 0 chr13 95403173 95403222 -24881090 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1312 1725 166 43 3 chr13 95403558 95403885 -24880427 + ORR1C1 LTR MaLR 1 340 -38 7 1312 262 333 45 36 chr13 95404283 95404395 -24879917 + MLT1G LTR MaLR 183 295 -296 7 1312 252 0 0 0 chr13 95405183 95405211 -24879101 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1312 377 329 131 12 chr13 95405811 95406063 -24878249 + MLT1G3 LTR MaLR 72 353 -242 7 1312 320 333 52 62 chr13 95406332 95406639 -24877673 - LTR16E1 LTR ERVL -36 502 199 7 1312 1154 69 23 0 chr13 95406905 95407079 -24877233 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 7 1312 216 0 0 0 chr13 95407079 95407103 -24877209 + (GGAA)n Simple_repeat Simple_repeat 1 24 0 7 1312 213 300 41 112 chr13 95407166 95407335 -24876977 + L2c LINE L2 3008 3164 -223 7 1312 465 19 0 0 chr13 95407476 95407530 -24876782 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1312 194 0 39 0 chr13 95407530 95407555 -24876757 + (GA)n Simple_repeat Simple_repeat 1 27 0 7 1312 359 309 0 31 chr13 95408058 95408155 -24876157 + PB1D10 SINE Alu 23 116 -1 7 1312 287 250 119 0 chr13 95409750 95409834 -24874478 + MIRb SINE MIR 99 192 -76 7 1312 238 215 25 0 chr13 95409895 95409974 -24874338 + (CA)n Simple_repeat Simple_repeat 1 81 0 7 1312 1911 128 54 6 chr13 95410308 95410622 -24873690 - ORR1A4 LTR MaLR 0 329 1 7 1312 508 297 141 82 chr13 95410899 95411445 -24872867 - L1MC5 LINE L1 -734 7227 6650 7 1312 1404 173 0 0 chr13 95413088 95413313 -24870999 - URR1B DNA MER1_type 0 225 1 7 1312 697 110 17 0 chr13 95416659 95416777 -24867535 + (TTCC)n Simple_repeat Simple_repeat 2 121 0 7 1312 231 320 0 0 chr13 95416797 95416875 -24867437 + C-rich Low_complexity Low_complexity 1 78 0 7 1312 562 229 112 17 chr13 95416885 95417063 -24867249 - ID_B1 SINE B4 -29 195 1 7 1312 191 385 0 0 chr13 95417214 95417292 -24867020 - L2b LINE L2 -20 3355 3278 7 1312 235 316 53 0 chr13 95418553 95418648 -24865664 - MLT1J2 LTR MaLR -119 329 230 7 1312 195 69 0 0 chr13 95418893 95418922 -24865390 + (TCTG)n Simple_repeat Simple_repeat 3 31 0 7 1312 274 274 83 28 chr13 95419379 95419488 -24864824 + PB1D10 SINE Alu 3 117 0 7 1312 546 210 0 0 chr13 95419515 95419639 -24864673 + GA-rich Low_complexity Low_complexity 3 126 0 7 1312 25 31 0 0 chr13 95419857 95419889 -24864423 + AT_rich Low_complexity Low_complexity 1 32 0 7 1312 725 98 9 0 chr13 95420120 95420232 -24864080 + (GGA)n Simple_repeat Simple_repeat 2 114 0 7 1313 261 320 0 25 chr13 95420675 95420755 -24863557 + B1_Mur2 SINE Alu 40 117 -32 7 1313 312 119 0 0 chr13 95420779 95420838 -24863474 + (CAGAGA)n Simple_repeat Simple_repeat 2 60 0 7 1313 828 118 0 0 chr13 95420840 95420967 -24863345 + (GGGGA)n Simple_repeat Simple_repeat 2 128 0 7 1313 239 301 84 119 chr13 95421053 95421279 -24863033 + LTR33 LTR ERVL 60 277 -238 7 1313 213 191 24 0 chr13 95421573 95421615 -24862697 - ID2 SINE ID -39 44 2 7 1313 1651 42 0 0 chr13 95421734 95421926 -24862386 - B2_Mm1a SINE B2 0 193 2 7 1313 1213 21 14 0 chr13 95421944 95422088 -24862224 - B1_Mm SINE Alu -1 146 1 7 1313 285 108 379 19 chr13 95422282 95422385 -24861927 - B2_Mm2 SINE B2 -9 186 47 7 1313 1342 79 11 0 chr13 95422430 95422607 -24861705 - B2_Mm1t SINE B2 -14 179 1 7 1313 237 293 13 13 chr13 95423735 95423811 -24860501 + Arthur1C DNA Tip100 288 363 0 7 1313 521 209 0 164 chr13 95424484 95424660 -24859652 + ID_B1 SINE B4 86 224 0 7 1313 231 36 0 0 chr13 95424891 95424919 -24859393 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1313 266 316 186 31 chr13 95425066 95425383 -24858929 + Zaphod DNA Tip100 121 486 -3545 7 1313 272 288 96 42 chr13 95425693 95425932 -24858380 + Zaphod DNA Tip100 3732 3983 -48 7 1313 31 44 0 0 chr13 95426117 95426162 -24858150 + AT_rich Low_complexity Low_complexity 1 45 0 7 1313 2061 185 8 20 chr13 95426568 95426966 -24857346 - RMER3D-int LTR ERVK -62 2780 2388 7 1313 4651 59 12 12 chr13 95426966 95427564 -24856748 + L1Md_F2 LINE L1 5985 6582 0 7 1313 1831 67 44 1 chr13 95427567 95427888 -24856424 + L1_Mur2 LINE L1 2907 3288 -626 7 1313 5268 206 68 30 chr13 95428145 95429467 -24854845 - RMER3D-int LTR ERVK -456 2386 1014 7 1313 471 101 22 33 chr13 95429582 95429682 -24854630 - RMER3D-int LTR ERVK -1753 1089 1022 7 1313 290 118 77 19 chr13 95429696 95429748 -24854564 - RMER3D-int LTR ERVK -2245 597 543 7 1313 2042 73 40 0 chr13 95429748 95430020 -24854292 - MusHAL1 LINE L1 -2888 466 184 7 1313 806 189 129 16 chr13 95430060 95430253 -24854059 - B3 SINE B2 0 216 2 7 1313 204 164 73 0 chr13 95430442 95430497 -24853815 + A-rich Low_complexity Low_complexity 2 60 0 7 1313 414 266 159 34 chr13 95431056 95431352 -24852960 - RLTR12B LTR ERVK -52 476 144 7 1313 409 323 120 55 chr13 95431712 95432020 -24852292 + ORR1E LTR MaLR 21 348 -11 7 1313 340 260 121 8 chr13 95432912 95432936 -24851376 - RSINE1 SINE B4 -5 160 136 7 1313 387 0 0 0 chr13 95432936 95432979 -24851333 + (GA)n Simple_repeat Simple_repeat 1 43 0 7 1313 340 260 121 8 chr13 95432979 95433078 -24851234 - RSINE1 SINE B4 -30 135 23 7 1313 283 289 8 102 chr13 95433388 95433436 -24850876 + B4A SINE B4 171 212 -80 7 1313 1055 95 161 0 chr13 95433436 95433604 -24850708 - B2_Mm2 SINE B2 0 195 1 7 1313 283 289 8 102 chr13 95433604 95433682 -24850630 + B4A SINE B4 213 285 -7 7 1313 234 0 0 0 chr13 95433711 95433737 -24850575 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1313 1067 115 11 0 chr13 95433798 95433972 -24850340 + (GAAA)n Simple_repeat Simple_repeat 4 179 0 7 1313 720 292 43 28 chr13 95434338 95434620 -24849692 + B4A SINE B4 3 288 -4 7 1313 223 177 16 16 chr13 95434656 95434719 -24849593 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 1313 655 251 148 58 chr13 95434787 95435125 -24849187 - L1MD1 LINE L1 -1991 6004 5638 7 1313 480 214 9 28 chr13 95435215 95435321 -24848991 + PB1D10 SINE Alu 13 116 -1 7 1313 500 210 53 53 chr13 95436140 95436271 -24848041 - RMER15 LTR ERVL 0 575 445 7 1313 371 152 758 52 chr13 95436686 95436802 -24847510 + URR1A DNA MER1_type 26 223 -3 7 1313 926 212 76 0 chr13 95436910 95437108 -24847204 - B3 SINE B2 0 216 4 7 1313 255 125 0 0 chr13 95438732 95438772 -24845540 + (TCTCCC)n Simple_repeat Simple_repeat 4 43 0 7 1313 285 75 0 0 chr13 95438775 95438815 -24845497 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1313 491 341 19 14 chr13 95438959 95439170 -24845142 - B4A SINE B4 -74 218 7 7 1313 279 0 0 0 chr13 95439697 95439728 -24844584 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 7 1313 487 70 112 0 chr13 95440804 95441022 -24843290 + (CACAT)n Simple_repeat Simple_repeat 1 242 0 7 1313 490 225 67 0 chr13 95442190 95442310 -24842002 - B3 SINE B2 -87 129 2 7 1313 1124 66 0 0 chr13 95442443 95442580 -24841732 + B1_Mus1 SINE Alu 3 139 -9 7 1313 228 86 0 0 chr13 95442580 95442615 -24841697 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1313 403 291 131 62 chr13 95444952 95445276 -24839036 - MTEb LTR MaLR -4 375 2 7 1313 290 284 56 11 chr13 95445866 95445955 -24838357 + MIRc SINE MIR 83 175 -93 7 1313 651 136 0 19 chr13 95446071 95446176 -24838136 - RLTR13A LTR ERVK 0 855 753 7 1313 226 155 172 94 chr13 95447127 95447191 -24837121 + MLT1I LTR MaLR 98 166 -245 8 1313 271 60 40 0 chr13 95447461 95447511 -24836801 + (TTAA)n Simple_repeat Simple_repeat 2 53 0 8 1313 433 212 12 12 chr13 95447586 95447667 -24836645 + B4 SINE B4 48 128 -164 8 1313 227 114 23 0 chr13 95448901 95448945 -24835367 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1313 198 0 0 0 chr13 95449105 95449127 -24835185 + (TC)n Simple_repeat Simple_repeat 1 22 0 8 1313 220 281 108 43 chr13 95449127 95449220 -24835092 - B4 SINE B4 -148 144 46 8 1313 3206 36 10 0 chr13 95449222 95449606 -24834706 - RLTR10 LTR ERVK -2 388 1 8 1313 396 0 0 0 chr13 95449945 95449989 -24834323 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1313 200 318 0 0 chr13 95450238 95450304 -24834008 + CT-rich Low_complexity Low_complexity 1 66 0 8 1313 225 307 0 39 chr13 95452225 95452303 -24832009 + GA-rich Low_complexity Low_complexity 4 78 0 8 1313 645 328 60 4 chr13 95452451 95452720 -24831592 - L1MB2 LINE L1 -80 6091 5808 8 1313 520 301 13 20 chr13 95453144 95453157 -24831155 - B1F SINE Alu 0 149 137 8 1313 297 51 0 0 chr13 95453157 95453196 -24831116 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 1313 520 301 13 20 chr13 95453196 95453331 -24830981 - B1F SINE Alu -13 136 2 8 1313 402 211 0 0 chr13 95453564 95453668 -24830644 + (TA)n Simple_repeat Simple_repeat 1 104 0 8 1313 198 351 37 37 chr13 95453752 95453888 -24830424 + MER5A DNA MER1_type 4 139 -50 8 1313 366 303 52 15 chr13 95453901 95454035 -24830277 - L1MB5 LINE L1 -15 6159 6021 8 1313 189 0 0 0 chr13 95454922 95454943 -24829369 + (CCA)n Simple_repeat Simple_repeat 1 21 0 8 1313 202 128 50 25 chr13 95456537 95456577 -24827735 + MIRm SINE MIR 50 90 -186 8 1313 394 88 14 14 chr13 95456678 95456747 -24827565 + (CA)n Simple_repeat Simple_repeat 2 70 0 8 1313 546 225 0 0 chr13 95459139 95459312 -24825000 + (CTGGGG)n Simple_repeat Simple_repeat 4 176 0 8 1313 204 188 0 0 chr13 95459318 95459387 -24824925 + (TG)n Simple_repeat Simple_repeat 2 70 0 8 1313 288 176 0 0 chr13 95459391 95459459 -24824853 + (CTGGGG)n Simple_repeat Simple_repeat 4 71 0 8 1313 199 208 20 40 chr13 95460283 95460333 -24823979 - L2a LINE L2 -1 3425 3377 8 1313 530 359 155 38 chr13 95461584 95462088 -24822224 + L3 LINE CR1 3530 4092 -397 8 1313 233 234 58 72 chr13 95462155 95462224 -24822088 + L3 LINE CR1 4278 4345 -144 8 1313 539 281 121 95 chr13 95462300 95462646 -24821666 - ORR1E LTR MaLR -4 355 1 8 1313 477 0 0 0 chr13 95462710 95462763 -24821549 + (CAAAA)n Simple_repeat Simple_repeat 5 57 0 8 1313 432 313 55 11 chr13 95463488 95463817 -24820495 + MER90a LTR ERV1 72 453 -161 8 1313 288 0 0 0 chr13 95463852 95463884 -24820428 + (TTA)n Simple_repeat Simple_repeat 2 33 0 8 1313 408 277 33 21 chr13 95464001 95464157 -24820155 - MTEa LTR MaLR -9 370 201 8 1313 256 346 85 18 chr13 95464481 95464646 -24819666 + MER90 LTR ERV1 8 183 -392 8 1313 243 0 0 0 chr13 95464959 95464986 -24819326 + (TG)n Simple_repeat Simple_repeat 1 27 0 8 1313 410 384 84 31 chr13 95465551 95465906 -24818406 - HAL1 LINE L1 -1318 1189 816 8 1313 334 272 159 8 chr13 95465907 95466033 -24818279 + B1F SINE Alu 1 145 -4 8 1313 266 213 13 0 chr13 95466039 95466049 -24818263 + (CAA)n Simple_repeat Simple_repeat 3 12 0 8 1313 1193 61 7 0 chr13 95466049 95466196 -24818116 + B1_Mus1 SINE Alu 1 148 0 8 1313 266 213 13 0 chr13 95466196 95466260 -24818052 + (CAA)n Simple_repeat Simple_repeat 1 65 0 8 1313 252 274 58 35 chr13 95466497 95466584 -24817728 - HAL1 LINE L1 -1890 617 529 8 1313 1630 221 67 15 chr13 95466697 95467089 -24817223 - MTD LTR MaLR -14 405 3 8 1313 249 213 0 0 chr13 95467880 95467927 -24816385 - 5S rRNA rRNA -27 94 48 8 1313 1578 68 0 0 chr13 95467929 95468360 -24815952 + (TTC)n Simple_repeat Simple_repeat 1 431 0 8 1313 958 148 7 0 chr13 95468362 95468511 -24815801 - B1_Mur4 SINE Alu 0 150 1 8 1313 1903 136 130 20 chr13 95469346 95469692 -24814620 + ORR1C2 LTR MaLR 1 384 0 8 1313 265 177 77 0 chr13 95469888 95469961 -24814351 + ID4_ SINE ID 8 84 -68 8 1313 279 262 0 0 chr13 95469977 95470057 -24814255 + (CA)n Simple_repeat Simple_repeat 1 80 0 8 1313 405 0 0 0 chr13 95471648 95471693 -24812619 + (TG)n Simple_repeat Simple_repeat 1 45 0 8 1313 198 103 0 0 chr13 95471985 95472014 -24812298 + (TCC)n Simple_repeat Simple_repeat 3 31 0 8 1313 378 0 0 0 chr13 95473413 95473455 -24810857 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1313 249 83 0 0 chr13 95474567 95474603 -24809709 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 1313 359 21 21 0 chr13 95474662 95474710 -24809602 + (CCCCCA)n Simple_repeat Simple_repeat 1 49 0 8 1313 1190 119 23 0 chr13 95474791 95474967 -24809345 + URR1B DNA MER1_type 46 225 0 8 1313 243 204 0 0 chr13 95476269 95476323 -24807989 + A-rich Low_complexity Low_complexity 1 54 0 8 1313 441 0 0 0 chr13 95477766 95477815 -24806497 + (TG)n Simple_repeat Simple_repeat 1 49 0 8 1313 225 0 0 0 chr13 95478357 95478382 -24805930 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1313 207 0 0 159 chr13 95481107 95481277 -24803035 + (CAGGG)n Simple_repeat Simple_repeat 3 145 0 8 1313 201 154 0 0 chr13 95481455 95481494 -24802818 + A-rich Low_complexity Low_complexity 1 39 0 8 1313 294 205 154 0 chr13 95481672 95481750 -24802562 + L4 LINE RTE 1731 1820 -209 8 1313 378 250 55 184 chr13 95482355 95482610 -24801702 + ID_B1 SINE B4 3 224 0 8 1313 486 0 0 0 chr13 95484014 95484068 -24800244 + (GA)n Simple_repeat Simple_repeat 1 54 0 8 1313 181 256 172 32 chr13 95484205 95484298 -24800014 + L2c LINE L2 3266 3371 -16 8 1313 251 305 53 0 chr13 95484826 95484921 -24799391 - Charlie24 DNA MER1_type -21 2429 2330 8 1313 369 0 0 0 chr13 95485453 95485494 -24798818 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 1313 361 61 0 0 chr13 95485561 95485603 -24798709 - HAL1-3A_ME LINE L1 -835 2023 1982 8 1313 462 18 0 0 chr13 95485603 95485658 -24798654 + (GA)n Simple_repeat Simple_repeat 1 55 0 8 1313 292 230 40 26 chr13 95485666 95485742 -24798570 - ID2 SINE ID -6 77 1 8 1313 255 243 14 0 chr13 95485855 95485925 -24798387 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 8 1313 1352 232 49 27 chr13 95486471 95486817 -24797495 - RCHARR1 DNA MER1_type -6 968 613 8 1313 714 279 0 46 chr13 95486817 95486990 -24797322 + RSINE1 SINE B4 1 165 0 8 1313 1352 232 49 27 chr13 95486990 95487011 -24797301 - RCHARR1 DNA MER1_type -362 612 593 8 1313 467 233 12 110 chr13 95487018 95487126 -24797186 - RCHARR1 DNA MER1_type -353 621 522 8 1313 1198 48 14 0 chr13 95487126 95487271 -24797041 - B1_Mm SINE Alu 0 147 1 8 1313 467 233 12 110 chr13 95487271 95487326 -24796986 - RCHARR1 DNA MER1_type -453 521 474 8 1313 571 180 0 0 chr13 95487343 95487443 -24796869 + RSINE1 SINE B4 25 124 -41 8 1313 270 0 0 0 chr13 95487444 95487474 -24796838 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 1313 1532 232 110 36 chr13 95487502 95487949 -24796363 - RCHARR1 DNA MER1_type -492 482 3 8 1313 379 225 18 26 chr13 95488076 95488190 -24796122 - PB1D10 SINE Alu 0 117 5 8 1313 228 367 36 27 chr13 95488193 95488305 -24796007 - L2a LINE L2 -7 3419 3307 8 1313 512 185 0 9 chr13 95488703 95488812 -24795500 + GA-rich Low_complexity Low_complexity 1 108 0 8 1313 378 0 0 0 chr13 95488963 95489005 -24795307 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 8 1313 336 225 25 0 chr13 95489005 95489085 -24795227 - PB1D9 SINE Alu -12 108 27 8 1313 375 270 39 29 chr13 95489393 95489440 -24794872 + MIR3 SINE MIR 105 155 -53 8 1313 580 254 21 31 chr13 95489440 95489631 -24794681 + MER5A DNA MER1_type 1 189 0 8 1313 375 270 39 29 chr13 95489631 95489686 -24794626 + MIR3 SINE MIR 156 207 -1 8 1313 480 234 81 22 chr13 95490230 95490436 -24793876 - B4A SINE B4 -8 284 19 8 1313 563 159 26 19 chr13 95490733 95490887 -24793425 + (TA)n Simple_repeat Simple_repeat 2 156 0 8 1313 519 31 0 0 chr13 95490889 95490954 -24793358 + (CA)n Simple_repeat Simple_repeat 2 66 0 8 1313 1062 57 28 0 chr13 95491953 95492094 -24792218 - B1_Mus1 SINE Alu 0 148 4 8 1313 799 211 40 40 chr13 95492094 95492174 -24792138 - ID_B1 SINE B4 -1 222 2 8 1313 1259 28 0 0 chr13 95492460 95492602 -24791710 + B1_Mus2 SINE Alu 1 142 -5 8 1313 204 67 0 0 chr13 95493201 95493231 -24791081 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1313 27 0 0 0 chr13 95494724 95494751 -24789561 + AT_rich Low_complexity Low_complexity 1 27 0 8 1313 444 208 71 30 chr13 95494889 95494988 -24789324 - PB1D10 SINE Alu -14 103 1 8 1313 794 106 8 0 chr13 95495094 95495217 -24789095 + (TTC)n Simple_repeat Simple_repeat 2 125 0 8 1313 1216 103 0 0 chr13 95495221 95495386 -24788926 - B2_Mm2 SINE B2 -28 167 3 8 1313 1292 293 103 41 chr13 95495420 95496588 -24787724 - L1MB8 LINE L1 -2 6176 4935 8 1313 861 10 0 0 chr13 95496682 95496780 -24787532 + (GAA)n Simple_repeat Simple_repeat 2 99 0 8 1313 2382 111 7 104 chr13 95496829 95497261 -24787051 - ORR1B1 LTR MaLR -4 390 1 8 1313 30 69 0 0 chr13 95497788 95497846 -24786466 + AT_rich Low_complexity Low_complexity 1 58 0 8 1313 260 350 120 6 chr13 95498453 95498611 -24785701 + MamSINE1 SINE tRNA 109 284 -6 8 1313 832 210 93 11 chr13 95498929 95498970 -24785342 - ID_B1 SINE B4 -26 198 154 8 1313 2000 86 168 0 chr13 95498970 95499250 -24785062 - ORR1A2 LTR MaLR 0 327 1 8 1313 832 210 93 11 chr13 95499250 95499391 -24784921 - ID_B1 SINE B4 -71 153 2 8 1313 191 353 50 38 chr13 95500252 95500411 -24783901 + MIRc SINE MIR 30 190 -78 1 1313 1510 239 70 36 chr13 95502664 95503136 -24781176 + RMER19C LTR ERVK 124 611 0 2 1313 21 0 0 0 chr13 95503275 95503296 -24781016 + AT_rich Low_complexity Low_complexity 1 21 0 3 1313 387 0 0 0 chr13 95503297 95503340 -24780972 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1313 264 250 36 0 chr13 95503345 95503401 -24780911 + ID4 SINE ID 26 83 0 5 1313 378 0 0 0 chr13 95503548 95503590 -24780722 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1313 2444 158 70 47 chr13 95504163 95504577 -24779735 - RLTR12B LTR ERVK 0 528 93 7 1313 1202 55 7 0 chr13 95504577 95504723 -24779589 + B1_Mus1 SINE Alu 2 148 0 8 1313 2444 158 70 47 chr13 95504723 95504821 -24779491 - RLTR12B LTR ERVK -436 92 5 7 1313 2905 21 18 0 chr13 95505450 95505781 -24778531 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 1313 57828 17 8 8 chr13 95505781 95512255 -24772057 + IAPEz-int LTR ERVK 8 6481 0 9 1313 2931 18 18 0 chr13 95512255 95512586 -24771726 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 1313 297 197 16 0 chr13 95512603 95512664 -24771648 - L1MC1 LINE L1 -124 6209 6148 1 1313 566 141 299 6 chr13 95512691 95512855 -24771457 - Lx9 LINE L1 0 7644 7433 1 1313 800 130 30 12 chr13 95512988 95513152 -24771160 + (TATATG)n Simple_repeat Simple_repeat 5 171 0 1 1313 760 255 160 21 chr13 95513415 95513752 -24770560 + MTD LTR MaLR 18 401 -18 1 1313 2799 47 4 159 chr13 95513973 95514432 -24769880 + RLTR10 LTR ERVK 1 388 -2 1 1313 3317 50 2 0 chr13 95514496 95514896 -24769416 - L1_Mus1 LINE L1 -417 6150 5750 1 1313 2182 47 32 25 chr13 95514896 95515181 -24769131 + L1_Mus1 LINE L1 6281 6567 0 1 1313 264 100 0 0 chr13 95515544 95515584 -24768728 + (A)n Simple_repeat Simple_repeat 1 40 0 1 1313 252 253 104 10 chr13 95515877 95515973 -24768339 + L1M5 LINE L1 5519 5623 -501 1 1313 289 341 59 14 chr13 95516213 95516433 -24767879 - L1ME3B LINE L1 -195 6045 5816 1 1313 339 295 143 32 chr13 95516445 95516753 -24767559 - L1ME3B LINE L1 -473 5767 5426 1 1313 776 299 84 102 chr13 95516758 95517461 -24766851 - L1MB8 LINE L1 -5 6173 5484 1 1313 3596 98 130 0 chr13 95517462 95517994 -24766318 - MT2B LTR ERVL 0 601 1 2 1313 546 194 369 13 chr13 95518022 95518179 -24766133 + B3 SINE B2 3 215 -1 2 1313 275 300 60 0 chr13 95518194 95518367 -24765945 - L1M5 LINE L1 -698 5475 5292 2 1313 511 227 74 49 chr13 95518613 95518775 -24765537 - L1MB4 LINE L1 -202 5978 5813 2 1313 339 150 0 0 chr13 95518843 95518903 -24765409 + (TA)n Simple_repeat Simple_repeat 1 60 0 2 1313 584 300 55 51 chr13 95518905 95519197 -24765115 - Lx9 LINE L1 -127 7517 7225 2 1313 276 260 50 40 chr13 95519260 95519360 -24764952 - Lx9 LINE L1 -758 6886 6786 2 1313 2413 166 48 40 chr13 95519516 95519648 -24764664 + RLTR16 LTR ERVK 1 130 -375 2 1313 1068 94 0 0 chr13 95519648 95519786 -24764526 + B1_Mus1 SINE Alu 1 138 -10 2 1313 220 0 56 28 chr13 95519786 95519822 -24764490 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 2 1313 2413 166 48 40 chr13 95519822 95520189 -24764123 + RLTR16 LTR ERVK 131 504 -1 2 1313 198 143 0 0 chr13 95520189 95520224 -24764088 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2 1313 1435 216 3 13 chr13 95520228 95520533 -24763779 + L1_Mur3 LINE L1 3664 3965 -1915 3 1313 564 250 25 20 chr13 95520682 95520878 -24763434 - L1MC LINE L1 -1583 4563 4367 3 1313 26 82 0 0 chr13 95520881 95520942 -24763370 + AT_rich Low_complexity Low_complexity 1 61 0 3 1313 1413 312 44 51 chr13 95520943 95521648 -24762664 - Lx8 LINE L1 -15 7458 6759 3 1313 730 279 89 43 chr13 95521666 95522082 -24762230 - L1_Mur3 LINE L1 -500 5347 4913 3 1313 183 80 0 0 chr13 95522284 95522309 -24762003 + (TTTTTG)n Simple_repeat Simple_repeat 2 26 0 3 1313 1199 143 134 68 chr13 95522579 95522871 -24761441 + RMER1B Other Other 743 1053 -13 3 1313 290 251 160 0 chr13 95522878 95523035 -24761277 - L1_Mur3 LINE L1 -1188 4955 4750 3 1313 591 278 89 34 chr13 95523009 95523300 -24761012 - L1_Rod LINE L1 -2700 3147 2841 3 1313 729 219 0 14 chr13 95523305 95523444 -24760868 - B1_Mur2 SINE Alu -2 147 11 3 1313 1553 294 65 15 chr13 95523462 95524111 -24760201 - L1_Mur3 LINE L1 -3048 2832 2152 3 1313 1232 288 79 28 chr13 95524574 95525099 -24759213 - L1_Rod LINE L1 -3659 2188 1627 3 1313 2105 182 79 5 chr13 95525099 95525490 -24758822 - MTC LTR MaLR 0 421 2 4 1313 1232 288 79 28 chr13 95525490 95525646 -24758666 - L1_Rod LINE L1 -4221 1626 1473 3 1313 898 280 51 18 chr13 95526558 95526677 -24757635 - L1MC LINE L1 -1766 4380 4257 3 1313 471 113 0 0 chr13 95526677 95526748 -24757564 + (CAT)n Simple_repeat Simple_repeat 2 72 0 4 1313 898 280 51 18 chr13 95526748 95526962 -24757350 - L1MC LINE L1 -1890 4256 4038 3 1313 2138 134 44 0 chr13 95527008 95527352 -24756960 - RLTR15 LTR ERVK 0 359 1 4 1313 586 299 134 27 chr13 95527371 95527736 -24756576 - L1MC LINE L1 -2415 3731 3328 3 1313 423 0 0 0 chr13 95527859 95527906 -24756406 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1313 267 31 0 0 chr13 95527906 95527937 -24756375 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 1313 578 295 90 22 chr13 95527986 95528208 -24756104 - B4A SINE B4 -55 237 1 4 1313 458 248 39 23 chr13 95528423 95528551 -24755761 - B1F1 SINE Alu -15 134 5 4 1313 226 288 0 43 chr13 95529254 95529392 -24754920 + GA-rich Low_complexity Low_complexity 3 134 0 4 1313 703 209 164 6 chr13 95530374 95530557 -24753755 - B3 SINE B2 0 216 5 4 1313 410 225 0 23 chr13 95530582 95530759 -24753553 + (TG)n Simple_repeat Simple_repeat 2 174 0 4 1313 268 234 0 34 chr13 95530778 95530924 -24753388 + (TG)n Simple_repeat Simple_repeat 2 142 0 4 1313 650 282 27 38 chr13 95530925 95531109 -24753203 - B3A SINE B2 -16 182 1 5 1313 1277 154 9 43 chr13 95531282 95531512 -24752800 - URR1B DNA MER1_type -2 223 2 5 1313 921 234 125 125 chr13 95532067 95532546 -24751766 - RMER13A LTR ERVK 0 860 382 5 1313 1213 55 0 0 chr13 95532583 95532729 -24751583 - B1_Mus1 SINE Alu -1 147 2 5 1313 198 0 0 0 chr13 95532758 95532780 -24751532 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 5 1313 1566 199 73 16 chr13 95532780 95533051 -24751261 - RMER13A LTR ERVK -467 393 103 5 1313 261 0 0 0 chr13 95533051 95533080 -24751232 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 5 1313 1566 199 73 16 chr13 95533080 95533180 -24751132 - RMER13A LTR ERVK -758 102 1 5 1313 285 268 147 15 chr13 95533432 95533629 -24750683 + L1MEf LINE L1 1813 2035 -4207 5 1313 457 191 0 41 chr13 95533695 95533793 -24750519 + PB1D9 SINE Alu 21 114 -6 5 1313 363 214 71 64 chr13 95533829 95533969 -24750343 + L1MEf LINE L1 2098 2238 -4004 5 1313 259 272 0 47 chr13 95534122 95534207 -24750105 + CT-rich Low_complexity Low_complexity 1 81 0 5 1313 529 276 99 22 chr13 95534300 95534522 -24749790 + RMER15 LTR ERVL 337 575 0 5 1313 322 272 11 0 chr13 95534525 95534651 -24749661 + L1MEf LINE L1 2267 2393 -3753 5 1313 257 329 60 0 chr13 95534863 95535012 -24749300 + L1MEf LINE L1 2698 2855 -3285 5 1313 225 0 0 0 chr13 95535061 95535086 -24749226 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1313 697 99 8 6 chr13 95535094 95535228 -24749084 - B1_Mus2 SINE Alu -13 135 1 6 1313 265 237 117 13 chr13 95535303 95535380 -24748932 + RSINE1 SINE B4 46 130 -35 6 1313 590 0 14 0 chr13 95535511 95535581 -24748731 + (GGAA)n Simple_repeat Simple_repeat 3 73 0 6 1313 222 280 0 0 chr13 95535619 95535669 -24748643 + CT-rich Low_complexity Low_complexity 6 55 0 6 1313 1905 191 13 120 chr13 95536222 95536428 -24747884 + RMER5 LTR ERV1 28 219 -315 6 1313 1183 68 0 0 chr13 95536428 95536575 -24747737 + B1_Mus2 SINE Alu 1 147 0 6 1313 1905 191 13 120 chr13 95536575 95536903 -24747409 + RMER5 LTR ERV1 220 505 -29 6 1313 234 0 0 0 chr13 95537680 95537706 -24746606 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1313 3815 266 107 14 chr13 95538194 95539395 -24744917 + Lx8 LINE L1 6057 7369 -104 6 1313 4317 146 63 53 chr13 95539424 95540372 -24743940 + RMER17B LTR ERVK 1 958 0 6 1313 336 318 45 0 chr13 95540663 95540773 -24743539 + ID_B1 SINE B4 79 193 -31 7 1313 376 254 82 7 chr13 95540676 95540790 -24743522 + B1F1 SINE Alu 11 129 -21 7 1313 241 316 65 50 chr13 95541240 95541440 -24742872 - MIRb SINE MIR -37 231 29 7 1313 231 202 55 9 chr13 95541589 95541699 -24742613 + (TA)n Simple_repeat Simple_repeat 2 116 0 7 1313 324 239 10 98 chr13 95541713 95541815 -24742497 - ID_B1 SINE B4 -11 213 121 7 1313 243 0 0 0 chr13 95541866 95541893 -24742419 + (ATTG)n Simple_repeat Simple_repeat 2 28 0 7 1313 23411 180 45 44 chr13 95541893 95548032 -24736280 - Lx5 LINE L1 -18 7032 889 7 1313 1582 258 78 33 chr13 95548844 95549039 -24735273 + RLTR20A2 LTR ERVK 2 212 -366 7 1313 252 0 0 0 chr13 95549039 95549067 -24735245 + (TGG)n Simple_repeat Simple_repeat 2 29 0 7 1313 1582 258 78 33 chr13 95549067 95549423 -24734889 + RLTR20A2 LTR ERVK 213 578 0 7 1313 1827 150 29 73 chr13 95549561 95549905 -24734407 + ORR1A4 LTR MaLR 1 329 0 7 1313 1123 76 14 0 chr13 95549938 95550082 -24734230 - B1_Mus1 SINE Alu -1 147 2 8 1313 296 259 242 13 chr13 95550134 95550283 -24734029 - B3A SINE B2 -14 184 2 8 1314 379 349 64 43 chr13 95551645 95551926 -24732386 + B4A SINE B4 6 292 0 8 1314 203 140 20 0 chr13 95551935 95551985 -24732327 + (CA)n Simple_repeat Simple_repeat 2 52 0 8 1314 345 294 68 54 chr13 95552024 95552319 -24731993 + L1ME3A LINE L1 4919 5217 -929 8 1314 324 311 82 52 chr13 95552468 95552736 -24731576 - B4A SINE B4 -16 276 1 8 1314 295 317 48 0 chr13 95552738 95552842 -24731470 - L1M5 LINE L1 -506 5667 5559 8 1314 1022 292 112 38 chr13 95552840 95553521 -24730791 + L1ME3A LINE L1 5194 5916 -257 8 1314 1645 206 33 3 chr13 95553521 95553882 -24730430 + ORR1D1 LTR MaLR 3 374 0 8 1314 1022 294 109 46 chr13 95553882 95553936 -24730376 + L1ME3A LINE L1 5917 5979 -194 8 1314 736 148 0 0 chr13 95554369 95554491 -24729821 - URR1B DNA MER1_type -31 194 73 8 1314 494 322 56 6 chr13 95554986 95555164 -24729148 - MLT1F2 LTR MaLR -373 187 1 8 1314 327 49 0 0 chr13 95555397 95555438 -24728874 + (CCTG)n Simple_repeat Simple_repeat 2 42 0 9 1314 624 302 53 50 chr13 95555488 95555770 -24728542 - B4A SINE B4 -6 286 4 9 1314 491 214 35 9 chr13 95555943 95556056 -24728256 + PB1D10 SINE Alu 2 117 0 9 1314 194 217 65 0 chr13 95556090 95556136 -24728176 - L2a LINE L2 -28 3398 3350 9 1314 474 281 23 64 chr13 95556357 95556528 -24727784 - MIR SINE MIR -89 173 10 9 1314 216 0 0 0 chr13 95556770 95556794 -24727518 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1314 542 315 0 14 chr13 95558032 95558177 -24726135 - RSINE1 SINE B4 -8 157 15 9 1314 33 0 0 0 chr13 95558426 95558459 -24725853 + AT_rich Low_complexity Low_complexity 1 33 0 9 1314 323 300 50 0 chr13 95561215 95561295 -24723017 - RSINE1 SINE B4 -15 150 67 9 1314 1476 202 107 23 chr13 95561646 95561991 -24722321 - ORR1D1 LTR MaLR 0 374 1 9 1314 1240 212 191 3 chr13 95562307 95562643 -24721669 - MTD LTR MaLR -18 401 3 1 1314 23 0 0 0 chr13 95562669 95562692 -24721620 + AT_rich Low_complexity Low_complexity 1 23 0 1 1314 339 327 38 19 chr13 95562846 95562952 -24721360 - MER81 DNA AcHobo -3 111 4 1 1314 366 80 0 0 chr13 95564338 95564388 -24719924 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1314 251 191 15 0 chr13 95564436 95564504 -24719808 + (TA)n Simple_repeat Simple_repeat 1 69 0 1 1314 371 379 6 6 chr13 95564951 95565113 -24719199 + MIR SINE MIR 84 245 -17 1 1314 398 160 13 13 chr13 95565147 95565223 -24719089 - MLT1A1 LTR MaLR -14 394 319 1 1314 314 206 105 32 chr13 95565319 95565414 -24718898 - MLT1A1 LTR MaLR -306 102 1 1 1314 213 39 0 0 chr13 95565695 95565721 -24718591 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1314 417 335 19 25 chr13 95565826 95565985 -24718327 - RSINE1 SINE B4 0 165 8 1 1314 2712 68 6 0 chr13 95566721 95567046 -24717266 - ORR1A2 LTR MaLR 0 327 1 1 1314 756 254 104 14 chr13 95567242 95567454 -24716858 + B4A SINE B4 4 234 -58 1 1314 258 232 0 0 chr13 95567782 95567838 -24716474 + B4A SINE B4 229 284 -8 1 1314 239 320 126 0 chr13 95568387 95568490 -24715822 + Charlie1b DNA MER1_type 1 116 -407 1 1314 252 278 105 53 chr13 95568553 95568667 -24715645 - B4 SINE B4 -170 122 3 1 1314 667 241 108 5 chr13 95568669 95568873 -24715439 + Charlie1b DNA MER1_type 109 333 -190 1 1314 521 294 115 31 chr13 95568925 95569185 -24715127 - B4A SINE B4 0 292 11 1 1314 343 257 48 86 chr13 95569229 95569416 -24714896 + Charlie1b DNA MER1_type 344 523 0 1 1314 27 0 0 0 chr13 95569526 95569553 -24714759 + AT_rich Low_complexity Low_complexity 1 27 0 1 1314 1305 21 14 0 chr13 95569553 95569698 -24714614 - B1_Mm SINE Alu 0 147 1 1 1314 788 235 13 0 chr13 95569931 95570084 -24714228 - RSINE1 SINE B4 -6 159 5 1 1314 540 292 93 60 chr13 95570622 95570891 -24713421 - MLT1A0 LTR MaLR -44 321 44 1 1314 223 225 0 0 chr13 95571399 95571439 -24712873 + polypyrimidine Low_complexity Low_complexity 3 42 0 1 1314 1067 114 0 45 chr13 95571461 95571617 -24712695 - B1_Mur4 SINE Alu 0 150 2 1 1314 1058 219 19 19 chr13 95572378 95572588 -24711724 - B3 SINE B2 -5 211 2 1 1314 585 308 31 25 chr13 95574264 95574424 -24709888 + RSINE1 SINE B4 4 164 -1 1 1314 675 158 91 70 chr13 95574472 95574615 -24709697 - B1_Mur3 SINE Alu 0 149 4 1 1314 727 128 176 0 chr13 95574989 95575114 -24709198 + B1_Mus1 SINE Alu 2 148 0 1 1314 22 0 0 0 chr13 95575117 95575139 -24709173 + AT_rich Low_complexity Low_complexity 1 22 0 1 1314 596 260 106 39 chr13 95575831 95576039 -24708273 - ID_B1 SINE B4 -1 223 2 1 1314 24 0 0 0 chr13 95576085 95576109 -24708203 + AT_rich Low_complexity Low_complexity 1 24 0 1 1314 508 294 7 53 chr13 95576289 95576440 -24707872 - B1F SINE Alu 0 149 6 1 1314 202 279 16 16 chr13 95576826 95576888 -24707424 - L2a LINE L2 -3 3423 3362 1 1314 331 289 51 46 chr13 95577598 95577729 -24706583 + PB1D10 SINE Alu 1 125 -22 1 1314 1071 0 0 0 chr13 95577805 95577924 -24706388 + (TCTCCC)n Simple_repeat Simple_repeat 3 121 0 1 1314 294 29 0 0 chr13 95577925 95577960 -24706352 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1314 340 256 56 62 chr13 95578428 95578590 -24705722 - MER112 DNA MER1_type -7 254 94 1 1314 515 216 33 33 chr13 95578596 95578716 -24705596 + B1F SINE Alu 30 149 0 1 1314 360 336 14 51 chr13 95578977 95579115 -24705197 - MIRb SINE MIR -133 135 3 1 1314 254 317 9 106 chr13 95579760 95579873 -24704439 - MIR3 SINE MIR -42 166 65 1 1314 312 70 0 0 chr13 95579988 95580031 -24704281 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 1 1314 1370 61 0 27 chr13 95580053 95580238 -24704074 - L1_Mus2 LINE L1 0 6566 6387 1 1314 1331 65 95 0 chr13 95580621 95580790 -24703522 + B2_Mm2 SINE B2 3 187 -8 1 1314 368 241 8 17 chr13 95580854 95580972 -24703340 + L1_Rod LINE L1 5731 5847 0 1 1314 277 187 27 0 chr13 95580994 95581069 -24703243 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1314 424 260 81 37 chr13 95581205 95581341 -24702971 - B1F1 SINE Alu -7 142 1 1 1314 403 232 0 43 chr13 95582075 95582192 -24702120 + Lx7 LINE L1 7285 7396 -300 1 1314 198 300 0 0 chr13 95582433 95582533 -24701779 + (CAGTG)n Simple_repeat Simple_repeat 1 100 0 1 1314 290 258 140 59 chr13 95582691 95583002 -24701310 - MLT1C LTR MaLR -14 453 50 1 1314 276 218 55 0 chr13 95582994 95583049 -24701263 + ID4_ SINE ID 5 62 -21 1 1314 234 240 106 39 chr13 95583191 95583295 -24701017 + PB1D9 SINE Alu 2 112 -8 1 1314 271 321 64 9 chr13 95583445 95583555 -24700757 + MamRep605 Unknown Unknown 88 203 -673 1 1314 1647 36 0 25 chr13 95584423 95584621 -24699691 - B2_Mm1a SINE B2 0 193 1 1 1314 270 0 0 0 chr13 95585679 95585709 -24698603 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1314 386 159 58 47 chr13 95590434 95590520 -24693792 + B1_Mur1 SINE Alu 50 136 -13 1 1314 402 85 0 0 chr13 95590963 95591022 -24693290 + (TG)n Simple_repeat Simple_repeat 1 59 0 1 1314 237 33 0 0 chr13 95591039 95591069 -24693243 + (CAGA)n Simple_repeat Simple_repeat 2 31 0 1 1314 590 231 7 44 chr13 95591069 95591200 -24693112 - B3A SINE B2 -55 143 17 1 1314 22 56 0 0 chr13 95592232 95592268 -24692044 + AT_rich Low_complexity Low_complexity 1 36 0 1 1314 534 254 14 103 chr13 95592268 95592413 -24691899 - RSINE1 SINE B4 -31 134 3 1 1314 370 250 12 12 chr13 95592439 95592520 -24691792 - ID4_ SINE ID -1 82 2 1 1314 3806 153 222 14 chr13 95593173 95593957 -24690355 + RMER21A LTR ERV1 1 947 0 1 1314 554 272 219 29 chr13 95594557 95594799 -24689513 + B4 SINE B4 5 292 0 1 1314 2025 135 0 51 chr13 95595192 95595527 -24688785 - ORR1A3 LTR MaLR -8 318 1 1 1314 592 232 114 28 chr13 95595804 95595979 -24688333 - B3A SINE B2 0 195 1 1 1314 394 330 142 0 chr13 95596417 95596656 -24687656 + L2a LINE L2 3154 3426 0 1 1314 392 246 97 28 chr13 95596658 95596834 -24687478 - HAL1 LINE L1 -878 1629 1442 1 1314 509 83 0 12 chr13 95596859 95596944 -24687368 + (TTTTC)n Simple_repeat Simple_repeat 2 85 0 1 1314 422 267 33 49 chr13 95596944 95597066 -24687246 - PB1D9 SINE Alu 0 120 1 1 1314 397 291 9 28 chr13 95597107 95597213 -24687099 - B4A SINE B4 -187 105 2 1 1314 1657 42 11 0 chr13 95597477 95597666 -24686646 + B2_Mm1t SINE B2 2 192 -1 1 1314 280 234 88 82 chr13 95597787 95597968 -24686344 - MTEa LTR MaLR 0 379 213 1 1314 309 308 46 59 chr13 95598320 95598472 -24685840 - MTE-int LTR MaLR -1180 400 251 1 1314 243 89 250 0 chr13 95598472 95598528 -24685784 - RLTR42 LTR ERVK 0 239 170 1 1314 560 263 84 38 chr13 95598830 95599043 -24685269 - MTE-int LTR MaLR -1317 263 41 1 1314 367 92 53 0 chr13 95599055 95599131 -24685181 + (TCTG)n Simple_repeat Simple_repeat 4 83 0 1 1314 300 219 232 45 chr13 95599495 95599672 -24684640 - Charlie6 DNA MER1_type -2253 1247 1038 1 1314 1532 202 86 6 chr13 95600649 95600988 -24683324 - ORR1D1 LTR MaLR -7 367 2 1 1314 265 295 26 0 chr13 95601145 95601223 -24683089 - ID2 SINE ID 0 83 4 1 1314 201 39 0 0 chr13 95601266 95601292 -24683020 + (CAAAAA)n Simple_repeat Simple_repeat 4 29 0 1 1314 1471 179 4 4 chr13 95601363 95601621 -24682691 - ORR1A3 LTR MaLR -68 258 1 1 1314 226 213 0 0 chr13 95601824 95601871 -24682441 - RMER21B LTR ERV1 -275 567 521 1 1314 279 241 0 17 chr13 95601879 95601938 -24682374 - RMER21B LTR ERV1 -677 165 108 1 1314 334 278 19 22 chr13 95602517 95602629 -24681683 + B1F SINE Alu 5 119 -1 1 1314 275 271 24 48 chr13 95602892 95603016 -24681296 + L1M3 LINE L1 5713 5833 -356 1 1314 318 189 21 8 chr13 95603369 95603457 -24680855 - B1_Mur2 SINE Alu -1 148 31 1 1314 238 196 39 0 chr13 95603587 95603638 -24680674 - B1_Mus1 SINE Alu -95 53 1 1 1314 343 265 198 60 chr13 95603797 95604213 -24680099 - L1MEc LINE L1 -3523 2796 2319 1 1314 412 310 11 84 chr13 95605017 95605207 -24679105 + Lx7 LINE L1 7160 7335 -361 1 1314 486 120 0 0 chr13 95605369 95605444 -24678868 + (TGGA)n Simple_repeat Simple_repeat 2 76 0 1 1314 530 253 81 23 chr13 95607275 95607449 -24676863 - MTE2a LTR MaLR -1 378 195 1 1314 435 250 46 168 chr13 95607605 95607778 -24676534 - MTE2a LTR MaLR -227 152 1 1 1314 467 244 80 52 chr13 95608268 95608466 -24675846 - MTE2a LTR MaLR 0 419 203 1 1314 2092 262 174 34 chr13 95608486 95609361 -24674951 - MTE2a-int LTR MaLR -4 1576 580 1 1314 1010 239 105 6 chr13 95609363 95609695 -24674617 - MTE2a-int LTR MaLR -1209 371 7 1 1314 660 212 96 34 chr13 95609700 95609920 -24674392 - MTE2a LTR MaLR 0 379 1 1 1314 477 216 108 0 chr13 95609921 95610023 -24674289 + PB1D9 SINE Alu 1 113 -7 1 1314 649 305 35 58 chr13 95610654 95610880 -24673432 - MTE2a LTR MaLR -36 343 123 1 1314 534 206 5 13 chr13 95610912 95611026 -24673286 - B3A SINE B2 -81 114 1 1 1314 643 120 10 0 chr13 95611115 95611215 -24673097 + B1_Mus2 SINE Alu 47 147 0 1 1314 477 90 0 0 chr13 95611240 95611307 -24673005 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 1314 22 35 0 0 chr13 95611400 95611429 -24672883 + AT_rich Low_complexity Low_complexity 1 29 0 1 1314 665 206 30 30 chr13 95611602 95611767 -24672545 + B3 SINE B2 51 215 -1 1 1314 1275 85 10 55 chr13 95611902 95612101 -24672211 + B2_Mm2 SINE B2 1 190 -5 1 1314 23 68 0 0 chr13 95612315 95612359 -24671953 + AT_rich Low_complexity Low_complexity 1 44 0 1 1314 257 278 72 53 chr13 95613293 95613445 -24670867 + RMER15 LTR ERVL 417 571 -4 1 1314 230 314 14 0 chr13 95613489 95613559 -24670753 - ID4 SINE ID -10 73 3 1 1314 410 298 22 44 chr13 95613569 95613706 -24670606 - B1F SINE Alu 0 149 16 1 1314 270 133 0 0 chr13 95616999 95617019 -24667293 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1314 1201 42 7 0 chr13 95617019 95617163 -24667149 + B1_Mus2 SINE Alu 3 147 0 2 1314 270 133 0 0 chr13 95617163 95617202 -24667110 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1314 1145 80 68 0 chr13 95617210 95617373 -24666939 + B2_Mm2 SINE B2 2 175 -20 2 1314 781 249 69 0 chr13 95617422 95617611 -24666701 + B3 SINE B2 1 202 -14 2 1314 350 228 25 0 chr13 95618090 95618169 -24666143 + ID4_ SINE ID 3 83 0 2 1314 1374 143 17 47 chr13 95618573 95618808 -24665504 - RLTR19A LTR ERVK 0 496 269 2 1314 313 215 158 64 chr13 95619310 95619462 -24664850 - MER5A DNA MER1_type -25 164 5 2 1314 192 77 0 0 chr13 95620095 95620121 -24664191 + (TA)n Simple_repeat Simple_repeat 1 26 0 2 1314 1186 111 37 32 chr13 95620122 95620309 -24664003 - B2_Mm2 SINE B2 -7 188 1 2 1314 788 165 22 8 chr13 95620319 95620453 -24663859 - B1_Mur2 SINE Alu -7 142 7 2 1314 504 284 0 61 chr13 95620453 95620484 -24663828 - ID_B1 SINE B4 -7 217 63 2 1314 1167 88 0 0 chr13 95620516 95620663 -24663649 - B1_Mus2 SINE Alu 0 147 1 2 1314 516 294 134 17 chr13 95621366 95621651 -24662661 + MER33 DNA MER1_type 2 320 -4 2 1314 207 0 0 0 chr13 95621748 95621771 -24662541 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1314 487 256 50 21 chr13 95622436 95622576 -24661736 - B1_Mur1 SINE Alu -1 148 5 2 1314 279 0 0 0 chr13 95622841 95622872 -24661440 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1314 485 148 0 30 chr13 95622887 95623019 -24661293 + (TA)n Simple_repeat Simple_repeat 1 128 0 2 1314 202 28 26 77 chr13 95623079 95623118 -24661194 + MIR SINE MIR 82 118 -90 2 1314 1545 46 5 10 chr13 95623218 95623414 -24660898 - B2_Mm2 SINE B2 0 195 1 2 1314 301 259 124 0 chr13 95623704 95623836 -24660476 - MER74A LTR ERVL -27 595 457 2 1314 550 222 105 38 chr13 95624430 95624653 -24659659 - RMER21A LTR ERV1 -258 689 326 2 1314 384 111 0 0 chr13 95625197 95625260 -24659052 + (TG)n Simple_repeat Simple_repeat 1 63 0 2 1314 424 300 0 55 chr13 95625271 95625398 -24658914 - RSINE1 SINE B4 -43 122 3 2 1314 222 262 115 38 chr13 95625809 95625916 -24658396 - L2a LINE L2 -11 3415 3277 2 1314 580 237 55 72 chr13 95626411 95626631 -24657681 + B3A SINE B2 1 215 -1 2 1314 1335 49 11 0 chr13 95627031 95627386 -24656926 + (CA)n Simple_repeat Simple_repeat 1 359 0 2 1314 2863 88 12 17 chr13 95628184 95628589 -24655723 + RLTR9D LTR ERVK 1 403 0 2 1314 444 295 52 15 chr13 95628785 95628919 -24655393 - ID_B1 SINE B4 -2 222 84 2 1314 248 314 29 10 chr13 95628931 95629034 -24655278 - LTR84a LTR ERVL -586 171 67 2 1314 1151 68 7 0 chr13 95629519 95629666 -24654646 + B1_Mus1 SINE Alu 1 148 0 2 1314 441 0 0 0 chr13 95629716 95629765 -24654547 + (TA)n Simple_repeat Simple_repeat 2 50 0 2 1314 297 116 0 0 chr13 95629775 95629818 -24654494 - URR1A DNA MER1_type -106 120 78 2 1314 387 0 0 0 chr13 95630616 95630659 -24653653 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 2 1314 572 229 58 7 chr13 95630960 95631097 -24653215 + RMER1C Other Other 415 546 -796 2 1314 506 79 13 0 chr13 95631383 95631459 -24652853 + (GA)n Simple_repeat Simple_repeat 1 77 0 2 1314 447 19 0 0 chr13 95631556 95631608 -24652704 + (TC)n Simple_repeat Simple_repeat 2 53 0 2 1314 438 188 0 0 chr13 95631608 95631704 -24652608 + (TG)n Simple_repeat Simple_repeat 2 97 0 2 1314 461 185 12 0 chr13 95631918 95631999 -24652313 - ID_B1 SINE B4 -8 216 135 2 1314 393 194 85 11 chr13 95632089 95632183 -24652129 - PB1D9 SINE Alu -7 113 13 2 1314 326 342 26 26 chr13 95632102 95632219 -24652093 - ID_B1 SINE B4 -48 176 60 2 1314 2037 148 79 3 chr13 95632334 95632687 -24651625 - ORR1B1 LTR MaLR -14 380 1 2 1314 441 260 10 0 chr13 95633543 95633647 -24650665 - ID_B1 SINE B4 0 224 120 2 1314 770 156 293 0 chr13 95633861 95634028 -24650284 - B3 SINE B2 0 216 1 2 1314 356 179 13 0 chr13 95634505 95634583 -24649729 + CT-rich Low_complexity Low_complexity 3 81 0 2 1314 383 252 135 10 chr13 95634690 95634794 -24649518 - PB1D7 SINE Alu -2 118 2 2 1314 558 54 0 0 chr13 95635034 95635108 -24649204 + (TGGA)n Simple_repeat Simple_repeat 1 74 0 2 1314 366 174 69 39 chr13 95635114 95635216 -24649096 - MTEa LTR MaLR 0 379 275 2 1314 497 168 40 0 chr13 95635290 95635415 -24648897 + GA-rich Low_complexity Low_complexity 4 133 0 2 1314 238 289 38 38 chr13 95635734 95635813 -24648499 - MTEa LTR MaLR -14 365 287 2 1314 324 0 0 0 chr13 95636167 95636203 -24648109 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1314 265 279 83 30 chr13 95636549 95636665 -24647647 + MLT1J LTR MaLR 350 494 -18 2 1314 200 195 0 24 chr13 95637900 95637942 -24646370 + MIRm SINE MIR 207 247 -29 2 1314 844 154 0 0 chr13 95638063 95638212 -24646100 + B1_Mur1 SINE Alu 1 149 0 2 1314 348 217 8 24 chr13 95639069 95639192 -24645120 + G-rich Low_complexity Low_complexity 1 121 0 2 1314 337 331 23 16 chr13 95639365 95639608 -24644704 + GA-rich Low_complexity Low_complexity 1 244 0 2 1314 227 79 26 0 chr13 95640447 95640485 -24643827 + (TCCA)n Simple_repeat Simple_repeat 3 41 0 2 1314 192 77 0 0 chr13 95642146 95642172 -24642140 + (GAA)n Simple_repeat Simple_repeat 1 26 0 2 1314 399 21 0 0 chr13 95643986 95644034 -24640278 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1314 21 0 0 0 chr13 95646013 95646034 -24638278 + AT_rich Low_complexity Low_complexity 1 21 0 2 1314 245 51 26 0 chr13 95646778 95646817 -24637495 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 2 1314 25 0 0 0 chr13 95648738 95648763 -24635549 + AT_rich Low_complexity Low_complexity 1 25 0 2 1314 213 94 0 0 chr13 95650998 95651030 -24633282 + (TTTTTG)n Simple_repeat Simple_repeat 5 36 0 2 1314 216 246 0 16 chr13 95653117 95653179 -24631133 + (CCG)n Simple_repeat Simple_repeat 2 62 0 2 1314 244 229 0 76 chr13 95653576 95653708 -24630604 + C-rich Low_complexity Low_complexity 6 127 0 2 1314 447 19 0 0 chr13 95654034 95654086 -24630226 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1314 367 260 0 10 chr13 95656273 95656370 -24627942 - PB1D7 SINE Alu 0 120 25 2 1314 27 0 0 0 chr13 95656748 95656775 -24627537 + AT_rich Low_complexity Low_complexity 1 27 0 2 1314 306 0 0 0 chr13 95656941 95656975 -24627337 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1314 219 352 21 32 chr13 95659024 95659118 -24625194 - PB1D10 SINE Alu 0 117 25 2 1314 305 277 195 6 chr13 95659237 95659389 -24624923 - MIRb SINE MIR -66 202 31 2 1314 1162 81 0 0 chr13 95659830 95659978 -24624334 - B1_Mus1 SINE Alu 0 148 1 2 1314 183 42 0 0 chr13 95660130 95660154 -24624158 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2 1314 655 174 111 22 chr13 95660155 95660290 -24624022 - B1_Mur3 SINE Alu -1 148 2 2 1314 331 285 127 91 chr13 95660290 95660357 -24623955 - B4 SINE B4 -202 90 17 2 1314 383 280 14 101 chr13 95660630 95660769 -24623543 - RMER10B LTR ERVL -3 395 269 2 1314 2677 158 30 61 chr13 95661258 95661784 -24622528 - RLTR28 LTR ERVL -14 510 1 2 1314 1993 206 31 8 chr13 95662428 95662809 -24621503 + MTD LTR MaLR 16 405 -14 2 1314 495 158 0 0 chr13 95662829 95662956 -24621356 + GA-rich Low_complexity Low_complexity 2 128 0 2 1314 2259 150 47 27 chr13 95663468 95663761 -24620551 - MTC LTR MaLR -8 413 118 2 1314 551 216 104 7 chr13 95663761 95663884 -24620428 + B1_Mur2 SINE Alu 2 138 -11 2 1314 867 20 0 0 chr13 95663884 95663985 -24620327 + (GAA)n Simple_repeat Simple_repeat 2 102 0 2 1314 551 216 104 7 chr13 95663985 95663996 -24620316 + B1_Mur2 SINE Alu 139 149 0 2 1314 2259 150 47 27 chr13 95663996 95664107 -24620205 - MTC LTR MaLR -304 117 1 2 1314 1965 136 6 33 chr13 95665490 95665825 -24618487 - ORR1A3 LTR MaLR 0 326 1 2 1314 830 209 96 0 chr13 95666568 95666745 -24617567 - B4A SINE B4 -94 198 5 2 1314 251 67 0 43 chr13 95667055 95667102 -24617210 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 2 1314 881 126 11 11 chr13 95667108 95667285 -24617027 + (GA)n Simple_repeat Simple_repeat 1 177 0 2 1314 336 233 14 0 chr13 95667296 95667369 -24616943 - B3A SINE B2 -124 74 1 2 1314 1085 242 112 45 chr13 95667474 95667946 -24616366 - RMER5 LTR ERV1 -16 518 15 2 1314 219 146 0 0 chr13 95668338 95668379 -24615933 + (A)n Simple_repeat Simple_repeat 1 41 0 2 1314 346 293 82 89 chr13 95668379 95668514 -24615798 - RSINE1 SINE B4 -29 136 3 2 1314 758 77 17 0 chr13 95668560 95668677 -24615635 + B1_Mur3 SINE Alu 31 149 0 2 1314 222 118 0 0 chr13 95668727 95668761 -24615551 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2 1314 596 246 0 0 chr13 95668769 95668895 -24615417 - B1_Mur3 SINE Alu -23 126 1 2 1314 525 248 61 15 chr13 95669585 95669716 -24614596 + ID_B1 SINE B4 86 222 -2 2 1314 434 200 131 88 chr13 95669732 95669828 -24614484 + B4A SINE B4 150 263 -29 2 1314 290 115 0 19 chr13 95669828 95669881 -24614431 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1314 434 200 131 88 chr13 95669881 95669921 -24614391 + B4A SINE B4 264 292 0 2 1314 807 236 75 0 chr13 95669974 95670173 -24614139 - B3 SINE B2 -2 214 1 2 1314 1034 179 59 10 chr13 95670449 95670652 -24613660 - B3 SINE B2 -3 213 1 2 1314 207 0 0 0 chr13 95672018 95672041 -24612271 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1314 767 230 113 31 chr13 95672057 95672286 -24612026 - B4 SINE B4 -44 248 1 2 1314 419 246 29 8 chr13 95672522 95672648 -24611664 - B4 SINE B4 -159 133 2 2 1314 305 254 110 8 chr13 95672842 95672969 -24611343 + MER3 DNA MER1_type 2 141 -68 3 1314 245 361 0 24 chr13 95673319 95673404 -24610908 - PB1D10 SINE Alu -34 83 1 3 1314 237 277 0 12 chr13 95673637 95673721 -24610591 - L1MC3 LINE L1 -827 6958 6876 3 1314 364 279 52 0 chr13 95673729 95673895 -24610417 + L1MB3 LINE L1 5402 5588 -703 3 1314 573 106 0 23 chr13 95673895 95673982 -24610330 - B1_Mur4 SINE Alu -39 111 27 3 1314 802 152 52 109 chr13 95673986 95674178 -24610134 - B2_Mm2 SINE B2 -13 182 2 3 1314 1069 270 105 67 chr13 95674179 95674395 -24609917 + L1MB3 LINE L1 5577 5780 -403 3 1314 369 62 0 0 chr13 95674395 95674443 -24609869 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1314 1069 270 105 67 chr13 95674443 95674703 -24609609 + L1MB3 LINE L1 5781 6071 -112 3 1314 21 36 0 0 chr13 95674750 95674778 -24609534 + AT_rich Low_complexity Low_complexity 1 28 0 3 1314 583 192 100 0 chr13 95674894 95675014 -24609298 - B1_Mus1 SINE Alu -5 143 12 3 1314 23 0 0 0 chr13 95675080 95675103 -24609209 + AT_rich Low_complexity Low_complexity 1 23 0 3 1314 336 279 95 9 chr13 95675270 95675375 -24608937 - PB1D10 SINE Alu -2 115 2 3 1314 411 172 220 10 chr13 95675746 95675846 -24608466 + B3 SINE B2 8 128 -88 3 1314 2989 154 26 9 chr13 95675907 95676582 -24607730 + Lx5 LINE L1 5394 6101 -949 3 1314 245 329 100 0 chr13 95676746 95676886 -24607426 - MLT1K LTR MaLR -124 471 318 3 1314 230 309 117 32 chr13 95677568 95677722 -24606590 - L2a LINE L2 -3 3423 3257 3 1314 1744 224 24 10 chr13 95677764 95677958 -24606354 - MTC LTR MaLR 0 421 226 3 1314 1762 134 74 3 chr13 95677958 95678243 -24606069 + RLTR27 LTR ERVK 1 305 -4 3 1314 1744 224 24 10 chr13 95678243 95678463 -24605849 - MTC LTR MaLR -196 225 3 3 1314 256 327 81 38 chr13 95678739 95678949 -24605363 + Charlie1a DNA MER1_type 7 225 -1230 3 1314 839 262 120 22 chr13 95679073 95679439 -24604873 + Charlie1a DNA MER1_type 437 838 -617 3 1314 222 171 0 0 chr13 95679576 95679617 -24604695 + CT-rich Low_complexity Low_complexity 2 42 0 3 1314 282 337 20 30 chr13 95679638 95679739 -24604573 - ID_B1 SINE B4 -49 175 76 3 1314 306 308 63 13 chr13 95679833 95679991 -24604321 + Charlie1a DNA MER1_type 1000 1165 -290 3 1314 867 20 0 0 chr13 95679994 95680095 -24604217 + (TC)n Simple_repeat Simple_repeat 2 102 0 3 1314 258 32 0 0 chr13 95680095 95680125 -24604187 + (TG)n Simple_repeat Simple_repeat 2 32 0 3 1314 362 248 98 10 chr13 95680193 95680295 -24604017 - RSINE1 SINE B4 -35 130 20 3 1314 1817 180 54 25 chr13 95681046 95681434 -24602878 + RLTR16 LTR ERVK 1 401 -104 3 1314 273 57 0 0 chr13 95681434 95681469 -24602843 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1314 1817 180 54 25 chr13 95681469 95681559 -24602753 + RLTR16 LTR ERVK 402 493 -12 3 1314 24 0 0 0 chr13 95681740 95681764 -24602548 + AT_rich Low_complexity Low_complexity 1 24 0 3 1315 315 254 21 129 chr13 95683742 95683882 -24600430 + RSINE1 SINE B4 41 165 0 3 1315 462 228 8 0 chr13 95683922 95684049 -24600263 - RCHARR1 DNA MER1_type -123 851 724 3 1315 487 180 7 129 chr13 95684460 95684551 -24599761 - RCHARR1 DNA MER1_type -326 648 569 3 1315 1479 78 0 5 chr13 95684551 95684743 -24599569 - B2_Mm2 SINE B2 -4 191 1 3 1315 487 180 7 129 chr13 95684743 95684798 -24599514 - RCHARR1 DNA MER1_type -406 568 520 3 1315 1278 122 24 5 chr13 95684826 95685032 -24599280 - Lx3_Mus LINE L1 0 7009 6800 3 1315 3628 75 21 0 chr13 95685033 95685502 -24598810 + Lx3_Mus LINE L1 6322 6800 -209 3 1315 742 269 130 58 chr13 95685502 95686002 -24598310 - RCHARR1 DNA MER1_type -436 538 3 3 1315 284 175 0 34 chr13 95686281 95686340 -24597972 - ID_B1 SINE B4 -66 158 102 3 1315 215 276 35 0 chr13 95686297 95686355 -24597957 - PB1 SINE Alu -63 64 5 3 1315 212 351 32 0 chr13 95686528 95686622 -24597690 + L2a LINE L2 3050 3146 -280 3 1315 1095 139 0 0 chr13 95686715 95686895 -24597417 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1315 825 82 30 7 chr13 95686896 95686959 -24597353 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 3 1315 1070 128 0 11 chr13 95686959 95687141 -24597171 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 3 1315 825 82 30 7 chr13 95687141 95687212 -24597100 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 3 1315 288 189 38 0 chr13 95687212 95687265 -24597047 + polypyrimidine Low_complexity Low_complexity 2 56 0 3 1315 288 243 0 0 chr13 95687265 95687339 -24596973 + CT-rich Low_complexity Low_complexity 2 75 0 3 1315 965 138 12 0 chr13 95687340 95687507 -24596805 + (TCTCCC)n Simple_repeat Simple_repeat 6 174 0 3 1315 511 88 0 0 chr13 95687624 95687704 -24596608 + L1_Mus1 LINE L1 6487 6566 -1 3 1315 507 220 67 15 chr13 95688253 95688387 -24595925 + MLT1A1 LTR MaLR 268 408 0 3 1315 290 267 0 0 chr13 95688508 95688568 -24595744 - Lx6 LINE L1 -298 7162 7103 3 1315 440 246 155 23 chr13 95688789 95688918 -24595394 - Lx6 LINE L1 -336 7124 6979 3 1315 5744 191 44 24 chr13 95688932 95688950 -24595362 - Lx6 LINE L1 -695 6765 6749 3 1315 3168 136 104 11 chr13 95688950 95689507 -24594805 - RMER19C LTR ERVK -2 609 1 3 1315 6366 159 51 22 chr13 95689507 95691493 -24592819 - Lx6 LINE L1 -712 6748 4720 3 1315 334 187 27 0 chr13 95691492 95691567 -24592745 + L1M1 LINE L1 5534 5610 -693 3 1315 223 72 23 23 chr13 95691579 95691622 -24592690 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1315 1068 278 48 11 chr13 95691632 95691981 -24592331 + Lx7 LINE L1 5587 5970 -1674 3 1315 866 246 33 152 chr13 95692171 95692501 -24591811 - Lx7 LINE L1 -686 5881 5589 3 1315 2841 70 6 0 chr13 95692513 95692869 -24591443 - L1_Mm LINE L1 -68 5815 5458 3 1315 1287 33 0 0 chr13 95692869 95693022 -24591290 + L1_Mus1 LINE L1 6415 6567 0 3 1315 781 171 89 0 chr13 95693029 95693187 -24591125 + MTC LTR MaLR 196 367 -54 3 1315 667 366 52 42 chr13 95693215 95693811 -24590501 + Lx8 LINE L1 6580 7181 -292 3 1315 1174 68 94 28 chr13 95693904 95694085 -24590227 - B2_Mm2 SINE B2 -2 193 1 3 1315 183 80 0 0 chr13 95694240 95694265 -24590047 + (CCTG)n Simple_repeat Simple_repeat 3 27 0 3 1315 21 36 0 0 chr13 95695074 95695102 -24589210 + AT_rich Low_complexity Low_complexity 1 28 0 3 1315 455 172 0 65 chr13 95697151 95697244 -24587068 + B1_Mur4 SINE Alu 3 89 -61 3 1315 227 161 0 111 chr13 95697196 95697259 -24587053 + 4.5SRNA scRNA scRNA 39 94 0 3 1315 291 258 102 10 chr13 95697431 95697529 -24586783 + RSINE1 SINE B4 55 161 -4 3 1315 239 323 10 20 chr13 95698068 95698169 -24586143 + CT-rich Low_complexity Low_complexity 2 101 0 3 1315 531 274 106 16 chr13 95699062 95699251 -24585061 - B3 SINE B2 -10 206 1 3 1315 371 118 13 0 chr13 95699415 95699491 -24584821 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1315 248 306 42 0 chr13 95699491 95699563 -24584749 - ID4 SINE ID -3 80 6 3 1315 257 330 11 11 chr13 95699595 95699687 -24584625 - B1_Mm SINE Alu -34 113 22 3 1315 26 50 0 0 chr13 95699929 95699969 -24584343 + AT_rich Low_complexity Low_complexity 1 40 0 3 1315 25 0 0 0 chr13 95700001 95700026 -24584286 + AT_rich Low_complexity Low_complexity 1 25 0 3 1315 270 95 0 0 chr13 95700121 95700163 -24584149 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1315 443 121 23 35 chr13 95701253 95701339 -24582973 + RLTR20D LTR ERVK 482 566 -2 3 1315 358 244 0 49 chr13 95701460 95701542 -24582770 + ID4_ SINE ID 6 83 0 3 1315 258 267 40 13 chr13 95703483 95703559 -24580753 - BC1_Mm scRNA scRNA -69 83 6 3 1315 2284 180 7 41 chr13 95703583 95704024 -24580288 + RMER20A LTR ERVK 1 426 -90 3 1315 549 351 26 16 chr13 95704134 95704328 -24579984 - B4 SINE B4 -13 279 84 3 1315 512 267 0 8 chr13 95704410 95704527 -24579785 + PB1D10 SINE Alu 1 116 -1 3 1315 284 315 102 0 chr13 95704615 95704742 -24579570 + MIR SINE MIR 5 144 -118 3 1315 2335 111 32 26 chr13 95704760 95705139 -24579173 - Lx9 LINE L1 -409 7235 6855 3 1315 1147 188 45 60 chr13 95705137 95705403 -24578909 + Lx9 LINE L1 7216 7477 -167 3 1315 6808 167 69 7 chr13 95705427 95707040 -24577272 - Lx5 LINE L1 -5 7045 5308 3 1315 594 188 86 27 chr13 95707038 95707224 -24577088 + Lx9 LINE L1 7448 7644 0 3 1315 357 275 94 129 chr13 95707227 95707398 -24576914 + Lx6 LINE L1 7241 7383 -77 3 1315 429 210 59 10 chr13 95708074 95708175 -24576137 + PB1D7 SINE Alu 1 106 -14 3 1315 254 339 109 8 chr13 95708562 95708690 -24575622 - MIRc SINE MIR -107 161 21 3 1315 26 30 0 0 chr13 95708795 95708828 -24575484 + AT_rich Low_complexity Low_complexity 1 33 0 3 1315 248 248 80 71 chr13 95709208 95709321 -24574991 + L2c LINE L2 3274 3387 0 3 1315 767 303 62 13 chr13 95712633 95712937 -24571375 + MER63D DNA AcHobo 57 375 -686 3 1315 494 270 77 18 chr13 95714543 95714825 -24569487 + L1_Mur3 LINE L1 1386 1674 -4212 3 1315 636 181 3 33 chr13 95714857 95714993 -24569319 + B1_Mur4 SINE Alu 3 138 -12 3 1315 324 0 0 0 chr13 95714993 95715029 -24569283 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 3 1315 478 317 124 29 chr13 95715041 95715525 -24568787 + L1_Mur3 LINE L1 1677 2206 -3674 3 1315 230 299 26 0 chr13 95715580 95715657 -24568655 - MLT1A0 LTR MaLR -60 305 227 3 1315 289 311 59 50 chr13 95715820 95716040 -24568272 - L1MD2 LINE L1 -385 5974 5753 3 1315 391 256 35 2 chr13 95716406 95716527 -24567785 - L1MD2 LINE L1 -771 5520 5387 3 1315 337 310 99 26 chr13 95716597 95716789 -24567523 - L1MEd LINE L1 -4911 1208 1003 3 1315 261 203 153 48 chr13 95716886 95717010 -24567302 + MLT1A1 LTR MaLR 258 394 -14 3 1315 848 191 85 0 chr13 95717618 95717817 -24566495 - B3 SINE B2 0 216 1 3 1315 400 287 22 7 chr13 95717853 95717990 -24566322 + B1F SINE Alu 6 144 -5 3 1315 217 339 0 48 chr13 95718023 95718085 -24566227 + ID SINE ID 23 81 -143 3 1315 302 339 70 6 chr13 95718611 95718783 -24565529 - L1ME5 LINE L1 -301 5893 5711 3 1315 788 141 0 15 chr13 95719293 95719423 -24564889 - B1_Mur2 SINE Alu 0 149 22 3 1315 843 215 169 49 chr13 95719418 95719702 -24564610 - MTEb LTR MaLR -61 318 1 3 1315 606 299 164 22 chr13 95719736 95720293 -24564019 - L1M5 LINE L1 -2286 3860 3225 3 1315 1236 54 15 10 chr13 95720322 95720527 -24563785 + (TCTA)n Simple_repeat Simple_repeat 1 206 0 3 1315 555 179 113 124 chr13 95720588 95720604 -24563708 - B4 SINE B4 -2 290 275 3 1315 1512 32 0 1 chr13 95720604 95721329 -24562983 + (TG)n Simple_repeat Simple_repeat 1 723 0 3 1315 555 179 113 124 chr13 95721329 95721482 -24562830 - B4 SINE B4 -18 274 113 3 1315 207 0 0 0 chr13 95721540 95721563 -24562749 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 3 1315 364 279 0 0 chr13 95721596 95721675 -24562637 - B4 SINE B4 -212 80 2 3 1315 21 36 0 0 chr13 95721701 95721729 -24562583 + AT_rich Low_complexity Low_complexity 1 28 0 4 1315 246 226 159 9 chr13 95721778 95721885 -24562427 - L1M5 LINE L1 -3021 3125 3003 3 1315 944 228 114 11 chr13 95721930 95722192 -24562120 - B4 SINE B4 0 292 4 4 1315 415 311 71 75 chr13 95722220 95722432 -24561880 - B4A SINE B4 0 292 82 4 1315 475 264 0 9 chr13 95722452 95722559 -24561753 - B3A SINE B2 -92 106 1 4 1315 205 120 87 0 chr13 95722966 95723058 -24561254 + (TA)n Simple_repeat Simple_repeat 1 100 0 4 1315 324 175 31 0 chr13 95723111 95723208 -24561104 + (TA)n Simple_repeat Simple_repeat 2 101 0 4 1315 561 187 0 0 chr13 95723336 95723427 -24560885 + B1_Mur2 SINE Alu 10 100 -49 4 1315 1115 291 102 10 chr13 95723451 95723843 -24560469 - Lx8 LINE L1 -961 6512 6085 4 1315 259 273 15 0 chr13 95724088 95724154 -24560158 + ID4_ SINE ID 14 80 -3 4 1315 387 329 57 7 chr13 95724893 95724927 -24559385 - B4 SINE B4 -50 242 209 4 1315 294 50 0 0 chr13 95724927 95724967 -24559345 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1315 387 329 57 7 chr13 95724967 95725073 -24559239 - B4 SINE B4 -84 208 97 4 1315 4194 185 113 27 chr13 95725340 95726312 -24558000 + RMER1B Other Other 2 1057 -9 4 1315 727 225 19 20 chr13 95726596 95726762 -24557550 + B3 SINE B2 1 164 -31 4 1315 361 103 29 0 chr13 95726762 95726830 -24557482 + (CA)n Simple_repeat Simple_repeat 1 70 0 4 1315 505 233 65 96 chr13 95726830 95726862 -24557450 + B2_Mm2 SINE B2 165 193 -2 4 1315 414 208 346 0 chr13 95727388 95727547 -24556765 - B3 SINE B2 0 216 3 4 1315 248 236 111 0 chr13 95728580 95728724 -24555588 + (TATAG)n Simple_repeat Simple_repeat 3 162 0 4 1315 706 120 0 8 chr13 95728804 95728922 -24555390 + B2_Mm2 SINE B2 70 186 -9 4 1315 21 0 0 31 chr13 95728922 95728934 -24555378 + AT_rich Low_complexity Low_complexity 1 12 0 4 1315 1086 88 7 0 chr13 95728934 95729081 -24555231 + B1_Mus1 SINE Alu 1 148 0 4 1315 21 0 0 31 chr13 95729081 95729100 -24555212 + AT_rich Low_complexity Low_complexity 1 19 0 4 1315 209 265 67 18 chr13 95729105 95729270 -24555042 + (TATAG)n Simple_repeat Simple_repeat 2 174 0 4 1315 1725 108 8 23 chr13 95729646 95729912 -24554400 - L1_Mur2 LINE L1 -696 5181 4920 4 1315 1192 132 13 42 chr13 95729906 95730143 -24554169 - L1_Mur2 LINE L1 -1285 4592 4363 4 1315 22387 56 13 9 chr13 95730129 95733748 -24550564 - L1Md_F2 LINE L1 -4 6578 2946 4 1315 1623 69 9 3 chr13 95733735 95733953 -24550359 - L1Md_F2 LINE L1 -355 5801 5572 4 1315 237 250 135 68 chr13 95734021 95734154 -24550158 + HAL1 LINE L1 1781 1922 -585 4 1315 683 209 203 8 chr13 95734206 95734447 -24549865 + L1M4b LINE L1 850 1137 -6197 4 1315 192 40 0 0 chr13 95734483 95734508 -24549804 + (CCAA)n Simple_repeat Simple_repeat 3 27 0 4 1315 281 286 222 43 chr13 95734653 95735113 -24549199 + L1M4b LINE L1 1497 2045 -5289 4 1315 840 238 32 68 chr13 95735193 95735473 -24548839 + Tigger5 DNA MER2_type 2133 2402 -4 4 1315 353 246 59 40 chr13 95736783 95736935 -24547377 - L1MD2 LINE L1 -2817 3727 3573 4 1315 840 289 50 62 chr13 95737134 95737632 -24546680 - L1_Rod LINE L1 -7 5840 5349 4 1315 1030 189 18 41 chr13 95737643 95737864 -24546448 - B3 SINE B2 0 216 1 4 1315 235 317 148 6 chr13 95737940 95738102 -24546210 - L1MD2 LINE L1 -5483 1157 973 4 1315 328 298 130 30 chr13 95738114 95738384 -24545928 - L1MD2 LINE L1 -5600 947 651 4 1315 303 382 23 62 chr13 95738486 95738617 -24545695 - L1MD2 LINE L1 -6040 507 384 4 1315 207 0 0 0 chr13 95738617 95738640 -24545672 + (TGGGGG)n Simple_repeat Simple_repeat 6 28 0 4 1315 303 382 23 62 chr13 95738640 95738812 -24545500 - L1MD2 LINE L1 -6164 383 216 4 1315 616 300 50 78 chr13 95738998 95739168 -24545144 - L1MD LINE L1 -875 5271 5104 4 1315 1341 71 22 6 chr13 95739168 95739351 -24544961 - B2_Mm2 SINE B2 -9 186 1 4 1315 616 300 50 78 chr13 95739351 95739640 -24544672 - L1MD LINE L1 -1043 5103 4825 4 1315 1207 293 174 14 chr13 95739680 95740463 -24543849 - L1MB4 LINE L1 0 6416 5508 4 1315 671 288 106 12 chr13 95740515 95740846 -24543466 - L1MB4 LINE L1 -1668 4708 4347 4 1315 625 178 36 151 chr13 95740847 95741039 -24543273 + MT2A LTR ERVL 2 171 -362 4 1315 988 127 0 0 chr13 95741040 95741182 -24543130 + B1_Mus1 SINE Alu 5 146 -2 4 1315 254 159 0 0 chr13 95741217 95741261 -24543051 + MT2A LTR ERVL 158 201 -332 4 1315 361 183 256 68 chr13 95741256 95741329 -24542983 + MT2A LTR ERVL 395 459 -74 4 1315 447 19 0 0 chr13 95741329 95741381 -24542931 + (CA)n Simple_repeat Simple_repeat 1 52 0 4 1315 361 183 256 68 chr13 95741381 95741424 -24542888 + MT2A LTR ERVL 460 531 -2 4 1315 911 164 326 31 chr13 95741424 95741741 -24542571 + MERVL_2A-int LTR ERVL 1 411 -5350 4 1315 426 288 112 7 chr13 95742039 95742315 -24541997 - L1MB4 LINE L1 -5058 1326 1022 4 1315 462 319 40 92 chr13 95742415 95742489 -24541823 - B4 SINE B4 -2 290 225 4 1315 198 0 0 0 chr13 95742489 95742511 -24541801 + (TTG)n Simple_repeat Simple_repeat 3 24 0 4 1315 462 319 40 92 chr13 95742511 95742740 -24541572 - B4 SINE B4 -68 224 3 4 1315 608 258 239 23 chr13 95742743 95743048 -24541264 - L1MB4 LINE L1 -5524 860 490 4 1315 322 351 8 0 chr13 95743104 95743238 -24541074 - L1MB4 LINE L1 -6224 160 26 4 1315 698 292 85 34 chr13 95743574 95743928 -24540384 + MTEa LTR MaLR 1 372 -7 4 1315 7911 65 6 4 chr13 95744315 95745674 -24538638 - L1Md_F2 LINE L1 0 6582 5219 4 1315 257 276 85 54 chr13 95745909 95746039 -24538273 + MIRb SINE MIR 18 151 -117 4 1315 36 40 0 0 chr13 95746549 95746599 -24537713 + GC_rich Low_complexity Low_complexity 1 50 0 4 1315 228 149 0 0 chr13 95747833 95747880 -24536432 + (TG)n Simple_repeat Simple_repeat 1 47 0 4 1315 593 301 0 12 chr13 95747966 95748131 -24536181 - RSINE1 SINE B4 0 165 3 4 1315 248 288 14 0 chr13 95750558 95750631 -24533681 - ID SINE ID -149 75 2 4 1315 444 269 97 0 chr13 95751494 95751628 -24532684 + B1F1 SINE Alu 1 147 -2 4 1315 460 249 91 63 chr13 95752678 95752931 -24531381 + L1MC5 LINE L1 6930 7189 -772 4 1315 1062 185 53 19 chr13 95753118 95753327 -24530985 - B3 SINE B2 0 216 1 4 1315 1303 211 33 21 chr13 95753463 95753793 -24530519 + RMER3D-int LTR ERVK 2509 2842 0 4 1315 3147 171 69 6 chr13 95753793 95754444 -24529868 + RLTR17 LTR ERVK 1 692 0 4 1315 263 324 106 31 chr13 95754831 95755086 -24529226 + L1MC5 LINE L1 7302 7575 -386 4 1315 389 297 6 25 chr13 95755999 95756158 -24528154 + (CACCC)n Simple_repeat Simple_repeat 3 158 0 4 1315 223 140 20 20 chr13 95756477 95756528 -24527784 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1315 329 278 0 14 chr13 95756528 95756601 -24527711 - ID4 SINE ID -10 73 2 4 1315 322 253 12 25 chr13 95757588 95757669 -24526643 - ID4_ SINE ID -2 81 2 4 1315 346 244 172 25 chr13 95757669 95757791 -24526521 - ID_B1 SINE B4 0 224 85 4 1315 1351 148 45 90 chr13 95757823 95757840 -24526472 + Lx9 LINE L1 7325 7341 -303 4 1315 504 32 0 0 chr13 95757840 95757902 -24526410 + (GA)n Simple_repeat Simple_repeat 2 63 0 4 1315 1351 148 45 90 chr13 95757902 95758217 -24526095 + Lx9 LINE L1 7342 7642 -2 4 1315 1710 195 142 65 chr13 95758504 95758998 -24525314 + RMER19B LTR ERVK 1 532 -370 4 1315 234 156 0 0 chr13 95759175 95759220 -24525092 + G-rich Low_complexity Low_complexity 1 45 0 4 1315 1563 154 143 15 chr13 95759614 95759650 -24524662 + ORR1B1 LTR MaLR 1 36 -358 4 1315 279 0 0 0 chr13 95759650 95759681 -24524631 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1315 1563 154 143 15 chr13 95759681 95759986 -24524326 + ORR1B1 LTR MaLR 37 384 -10 4 1315 942 160 206 0 chr13 95760221 95760396 -24523916 + B3 SINE B2 1 211 -5 4 1315 1289 180 61 0 chr13 95760425 95760703 -24523609 - ORR1D1 LTR MaLR -1 373 79 4 1315 259 231 0 0 chr13 95761279 95761331 -24522981 - Lx8 LINE L1 -2 7471 7420 4 1315 712 337 74 28 chr13 95762835 95763378 -24520934 + Lx8 LINE L1 4709 5276 -867 4 1315 432 214 0 0 chr13 95763477 95763566 -24520746 + B4A SINE B4 1 89 -203 4 1315 1136 236 88 29 chr13 95763580 95763964 -24520348 - RMER19B LTR ERVK -1 901 495 4 1315 23 33 0 0 chr13 95763975 95764005 -24520307 + AT_rich Low_complexity Low_complexity 1 30 0 4 1315 459 0 0 0 chr13 95764184 95764235 -24520077 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1315 251 319 17 8 chr13 95764341 95764458 -24519854 - RLTR17 LTR ERVK -266 426 309 4 1315 440 286 13 34 chr13 95764465 95764680 -24519632 + Lx8 LINE L1 5721 5995 -305 4 1315 183 42 0 0 chr13 95764834 95764858 -24519454 + (CAA)n Simple_repeat Simple_repeat 1 24 0 4 1315 590 232 158 0 chr13 95765429 95765593 -24518719 - B3A SINE B2 -8 190 1 4 1315 257 284 83 0 chr13 95765972 95766081 -24518231 - MER2 DNA MER2_type -63 282 165 4 1315 303 93 0 0 chr13 95766132 95766175 -24518137 + (TTGG)n Simple_repeat Simple_repeat 1 43 0 4 1315 345 284 101 0 chr13 95766299 95766408 -24517904 + B1F SINE Alu 2 121 -28 4 1315 252 303 53 0 chr13 95767622 95767698 -24516614 - MIR SINE MIR -30 232 153 4 1315 2341 32 0 11 chr13 95768037 95768319 -24515993 + L1_Mus1 LINE L1 6289 6567 0 4 1315 304 167 14 14 chr13 95768326 95768399 -24515913 + GA-rich Low_complexity Low_complexity 2 74 0 4 1315 315 71 0 0 chr13 95769142 95769184 -24515128 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1315 1469 283 97 75 chr13 95770697 95771403 -24512909 + L1MB8 LINE L1 3731 4506 -1634 4 1315 784 207 90 5 chr13 95771403 95771592 -24512720 + B3 SINE B2 1 205 -11 4 1315 1469 270 82 81 chr13 95771592 95771992 -24512320 + L1MB8 LINE L1 4505 4903 -1243 4 1315 397 294 28 0 chr13 95772014 95772123 -24512189 + PB1 SINE Alu 2 113 -14 4 1315 285 259 25 0 chr13 95772184 95772265 -24512047 + L1MB8 LINE L1 5127 5209 -937 4 1315 351 0 0 0 chr13 95773134 95773173 -24511139 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1315 879 251 128 20 chr13 95773423 95773548 -24510764 + L1MB8 LINE L1 5188 5333 -813 4 1315 1408 75 37 11 chr13 95773548 95773737 -24510575 + B2_Mm2 SINE B2 1 194 -1 4 1315 879 264 133 60 chr13 95773737 95774204 -24510108 + L1MB8 LINE L1 5334 5827 -351 4 1315 25 41 0 20 chr13 95774477 95774515 -24509797 + AT_rich Low_complexity Low_complexity 1 38 0 4 1315 4386 74 48 7 chr13 95774515 95775125 -24509187 - Lx3A LINE L1 -2 6979 6345 4 1315 25 41 0 20 chr13 95775125 95775136 -24509176 + AT_rich Low_complexity Low_complexity 1 11 0 4 1315 376 298 228 10 chr13 95775190 95775635 -24508677 - MLT1F LTR MaLR -6 563 4 4 1315 1175 81 0 0 chr13 95776055 95776203 -24508109 - B1_Mus1 SINE Alu 0 148 1 4 1315 532 248 68 137 chr13 95776302 95776638 -24507674 - L1MA4 LINE L1 -370 5930 5618 4 1315 245 308 13 13 chr13 95776666 95776745 -24507567 + (TG)n Simple_repeat Simple_repeat 1 79 0 4 1315 502 238 108 95 chr13 95776745 95776903 -24507409 - RSINE1 SINE B4 0 165 6 4 1315 224 264 19 0 chr13 95776940 95776993 -24507319 + PB1D7 SINE Alu 47 100 -20 4 1315 392 295 26 9 chr13 95777670 95777783 -24506529 - MER21B LTR ERV1 -121 742 628 4 1315 510 17 0 0 chr13 95777792 95777851 -24506461 + (TC)n Simple_repeat Simple_repeat 2 60 0 4 1315 1477 280 121 17 chr13 95777881 95778361 -24505951 - MER21B LTR ERV1 -323 540 11 4 1315 440 154 327 0 chr13 95781233 95781343 -24502969 + B1_Mus2 SINE Alu 2 147 0 4 1315 1144 165 52 9 chr13 95781369 95781601 -24502711 - Lx9 LINE L1 -8 7636 7395 4 1315 801 295 55 33 chr13 95781610 95781883 -24502429 + B4A SINE B4 6 284 -8 4 1315 248 258 89 62 chr13 95782637 95783042 -24501270 + RMER1C Other Other 423 838 -504 4 1315 275 346 94 8 chr13 95783657 95783785 -24500527 - MIRc SINE MIR -110 158 20 4 1315 409 362 121 41 chr13 95784088 95784528 -24499784 - L1ME4a LINE L1 -247 5877 5403 4 1315 1047 101 0 0 chr13 95785327 95785486 -24498826 + (CA)n Simple_repeat Simple_repeat 2 160 0 5 1315 225 187 40 0 chr13 95786170 95786245 -24498067 + (TG)n Simple_repeat Simple_repeat 1 78 0 5 1315 232 299 0 0 chr13 95786275 95786342 -24497970 - B4A SINE B4 -8 284 218 5 1315 255 165 0 34 chr13 95786389 95786477 -24497835 + (TG)n Simple_repeat Simple_repeat 2 86 0 5 1315 638 215 23 76 chr13 95786480 95786651 -24497661 - RSINE1 SINE B4 0 165 4 5 1315 217 386 46 23 chr13 95786653 95786783 -24497529 + MIRc SINE MIR 108 240 -28 5 1315 209 59 0 56 chr13 95788208 95788244 -24496068 + (TCCC)n Simple_repeat Simple_repeat 1 34 0 5 1315 580 210 145 0 chr13 95790166 95790290 -24494022 - B3 SINE B2 -69 147 6 5 1315 313 246 17 6 chr13 95791306 95791395 -24492917 + B1F SINE Alu 3 68 -81 5 1315 270 0 0 0 chr13 95791894 95791924 -24492388 + (TCTG)n Simple_repeat Simple_repeat 4 33 0 5 1315 329 295 155 28 chr13 95792900 95793113 -24491199 - Charlie26a DNA MER1_type -28 297 58 5 1315 27 62 0 0 chr13 95795244 95795292 -24489020 + AT_rich Low_complexity Low_complexity 1 48 0 5 1315 212 260 31 219 chr13 95796238 95796366 -24487946 + B3 SINE B2 15 118 -98 5 1315 502 254 26 0 chr13 95796258 95796372 -24487940 + B4 SINE B4 20 136 -156 5 1315 261 0 0 0 chr13 95796425 95796454 -24487858 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1315 283 241 34 67 chr13 95796566 95796591 -24487721 - BC1_Mm scRNA scRNA -53 99 77 5 1315 306 0 0 0 chr13 95796591 95796625 -24487687 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 5 1315 283 244 31 82 chr13 95796625 95796706 -24487606 - BC1_Mm scRNA scRNA -7 76 3 5 1315 2614 154 56 24 chr13 95796961 95797460 -24486852 + RMER20A LTR ERVK 2 516 0 5 1315 374 335 66 33 chr13 95798235 95798448 -24485864 + Charlie1a DNA MER1_type 257 476 -979 5 1315 1675 123 151 0 chr13 95798541 95798825 -24485487 + ORR1A2 LTR MaLR 1 327 0 5 1315 189 171 0 0 chr13 95799566 95799601 -24484711 + (TATG)n Simple_repeat Simple_repeat 4 38 0 5 1315 446 303 106 42 chr13 95799636 95799901 -24484411 - B4A SINE B4 -6 286 5 5 1315 231 248 93 50 chr13 95800633 95800773 -24483539 + IAPLTR2b LTR ERVK 121 266 -61 5 1315 27 49 0 0 chr13 95801755 95801796 -24482516 + AT_rich Low_complexity Low_complexity 1 41 0 5 1315 679 303 54 151 chr13 95801953 95802396 -24481916 + MTC LTR MaLR 8 407 -14 5 1315 2022 136 45 21 chr13 95805256 95805586 -24478726 + ORR1A1 LTR MaLR 1 338 -8 5 1315 374 221 11 0 chr13 95806304 95806399 -24477913 + CT-rich Low_complexity Low_complexity 2 97 0 5 1315 5423 196 87 6 chr13 95806412 95807661 -24476651 + L1MA4 LINE L1 3937 5286 -594 5 1315 1428 201 80 123 chr13 95807677 95808115 -24476197 - MTD LTR MaLR 0 419 1 5 1315 2178 238 41 16 chr13 95808115 95808685 -24475627 + L1MA4 LINE L1 5298 5935 -365 5 1315 1374 285 64 17 chr13 95808718 95809139 -24475173 + L1MA4 LINE L1 6516 6956 -740 5 1315 398 94 16 0 chr13 95809139 95809203 -24475109 + (TC)n Simple_repeat Simple_repeat 1 65 0 5 1315 426 65 0 0 chr13 95809198 95809260 -24475052 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1315 911 306 51 35 chr13 95809260 95809758 -24474554 + L1MA4 LINE L1 6954 7469 -4 5 1315 1284 55 0 12 chr13 95811392 95811558 -24472754 + B2_Mm2 SINE B2 1 164 -31 5 1315 1032 156 0 0 chr13 95811574 95811754 -24472558 + GA-rich Low_complexity Low_complexity 1 180 0 5 1315 274 217 183 0 chr13 95812556 95812616 -24471696 - PB1 SINE Alu -28 99 29 5 1316 533 195 13 20 chr13 95815533 95815685 -24468627 + CT-rich Low_complexity Low_complexity 1 151 0 5 1316 430 299 0 11 chr13 95815685 95815773 -24468539 - PB1D10 SINE Alu -15 102 16 5 1316 264 248 79 92 chr13 95816983 95817147 -24467165 + L2 LINE L2 2608 2769 -650 5 1316 628 189 0 14 chr13 95818281 95818426 -24465886 + CT-rich Low_complexity Low_complexity 1 143 0 5 1316 401 180 41 0 chr13 95819116 95819288 -24465024 + (CCCCAG)n Simple_repeat Simple_repeat 1 179 0 5 1316 270 0 0 0 chr13 95820524 95820554 -24463758 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1316 393 299 93 29 chr13 95820846 95821018 -24463294 + MIRb SINE MIR 59 241 -27 5 1316 1391 71 16 11 chr13 95821274 95821459 -24462853 + B2_Mm2 SINE B2 1 186 -9 5 1316 606 66 33 0 chr13 95821459 95821550 -24462762 + Lx2 LINE L1 6904 6997 0 5 1316 212 316 0 2 chr13 95821599 95821658 -24462654 - MIRm SINE MIR -10 266 207 5 1316 193 255 155 31 chr13 95822325 95822422 -24461890 - MIR3 SINE MIR -40 168 60 5 1316 180 0 0 0 chr13 95822956 95822976 -24461336 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1316 264 30 0 0 chr13 95823032 95823065 -24461247 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1316 962 277 34 8 chr13 95823856 95824118 -24460194 + B4A SINE B4 5 273 -19 5 1316 266 135 0 37 chr13 95826200 95826254 -24458058 + CT-rich Low_complexity Low_complexity 2 53 0 5 1316 516 32 0 0 chr13 95826254 95826316 -24457996 + (TG)n Simple_repeat Simple_repeat 1 62 0 5 1316 345 24 0 0 chr13 95826316 95826357 -24457955 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1316 1473 284 84 0 chr13 95826450 95826890 -24457422 + RCHARR1 DNA MER1_type 5 481 -493 5 1316 1387 223 113 8 chr13 95827053 95827424 -24456888 + RCHARR1 DNA MER1_type 534 943 -31 5 1316 334 292 187 63 chr13 95827611 95828471 -24455841 + L1ME2z LINE L1 5453 6419 -25 5 1316 267 82 0 169 chr13 95828512 95828571 -24455741 + PB1D9 SINE Alu 11 59 -61 5 1316 294 0 0 160 chr13 95828572 95828722 -24455590 + (CAGAG)n Simple_repeat Simple_repeat 5 130 0 5 1316 757 132 0 0 chr13 95828725 95828831 -24455481 + B1_Mur2 SINE Alu 42 147 -2 5 1316 207 296 79 30 chr13 95829204 95829305 -24455007 + L2a LINE L2 3313 3418 -8 5 1316 288 0 0 0 chr13 95829671 95829703 -24454609 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 5 1316 854 241 81 18 chr13 95829834 95830054 -24454258 - MTD LTR MaLR -164 255 6 5 1316 3727 256 73 122 chr13 95830054 95832270 -24452042 + MYSERV-int LTR ERVK 4378 6485 -65 5 1316 1629 226 69 35 chr13 95832291 95832800 -24451512 + RLTR11A2 LTR ERVK 1 526 -1 5 1316 445 236 11 0 chr13 95832869 95832958 -24451354 - MTD LTR MaLR -329 90 1 5 1316 248 77 26 0 chr13 95833658 95833697 -24450615 + (TGGGGG)n Simple_repeat Simple_repeat 1 40 0 5 1316 662 102 0 0 chr13 95834158 95834246 -24450066 + B2_Mm2 SINE B2 1 88 -107 5 1316 258 234 143 0 chr13 95834300 95834377 -24449935 - MER5A1 DNA MER1_type 0 166 79 5 1316 543 103 68 11 chr13 95834376 95834464 -24449848 + B2_Mm2 SINE B2 93 185 -10 5 1316 526 299 36 31 chr13 95834466 95834659 -24449653 - B3A SINE B2 -4 194 1 5 1316 260 236 298 8 chr13 95834836 95834960 -24449352 + MER5A1 DNA MER1_type 7 166 0 5 1316 240 342 0 0 chr13 95834996 95835072 -24449240 - ID4 SINE ID -4 79 4 5 1316 1979 172 55 38 chr13 95835283 95835681 -24448631 + RMER20B LTR ERVK 1 405 -222 5 1316 497 190 22 97 chr13 95835717 95835851 -24448461 + RMER20B LTR ERVK 504 627 0 5 1316 460 321 113 32 chr13 95835887 95836170 -24448142 - MLT2B2 LTR ERVL -188 327 22 5 1316 200 286 185 28 chr13 95836184 95836292 -24448020 - MER5A DNA MER1_type -18 171 47 5 1316 260 250 125 0 chr13 95837124 95837196 -24447116 - L2a LINE L2 -1 3425 3345 5 1316 888 290 70 55 chr13 95838327 95839523 -24444789 + L1ME2z LINE L1 2105 3342 -3195 5 1316 290 311 78 41 chr13 95839760 95839978 -24444334 + L1ME2z LINE L1 4854 5079 -1458 5 1316 259 306 102 34 chr13 95840048 95840254 -24444058 + L1ME2z LINE L1 5190 5409 -1128 5 1316 969 117 84 45 chr13 95840316 95840495 -24443817 + B2_Mm2 SINE B2 2 187 -8 5 1316 782 273 139 49 chr13 95840596 95841127 -24443185 + L1ME2z LINE L1 5679 6257 -578 5 1316 1109 135 129 5 chr13 95841747 95841948 -24442364 + URR1A DNA MER1_type 1 226 0 5 1316 1716 268 82 122 chr13 95842112 95842953 -24441359 + RLTR22_Mur LTR ERVK 1 807 -1041 5 1316 440 255 59 85 chr13 95842943 95843213 -24441099 + RMER12 LTR ERVK 958 1261 -547 5 1316 345 325 70 70 chr13 95844812 95844984 -24439328 + MER5B DNA MER1_type 5 176 -2 5 1316 778 255 110 51 chr13 95845705 95846040 -24438272 + ORR1E LTR MaLR 1 355 -4 5 1316 1035 131 173 0 chr13 95846163 95846354 -24437958 - URR1B DNA MER1_type -1 224 1 5 1316 440 279 50 33 chr13 95846827 95846983 -24437329 + MIRb SINE MIR 31 188 -80 5 1316 471 282 70 74 chr13 95847460 95847590 -24436722 - MER63D DNA AcHobo -79 982 861 5 1316 354 45 0 0 chr13 95847590 95847634 -24436678 + (TTG)n Simple_repeat Simple_repeat 3 46 0 5 1316 471 282 70 74 chr13 95847634 95847733 -24436579 - MER63D DNA AcHobo -201 860 755 5 1316 234 0 0 0 chr13 95848695 95848721 -24435591 + (CCA)n Simple_repeat Simple_repeat 2 27 0 5 1316 270 299 23 11 chr13 95850540 95850628 -24433684 - MER58B DNA MER1_type -4 337 249 5 1316 180 0 0 0 chr13 95852907 95852927 -24431385 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 5 1316 252 0 0 0 chr13 95853506 95853534 -24430778 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 5 1316 323 289 11 0 chr13 95855494 95855584 -24428728 - MIRb SINE MIR -79 189 99 5 1316 249 271 14 0 chr13 95857148 95857218 -24427094 + ID4 SINE ID 2 72 -11 5 1316 229 288 0 36 chr13 95857884 95857967 -24426345 + L2c LINE L2 3131 3210 -177 5 1316 230 315 153 8 chr13 95858297 95858428 -24425884 + MIRb SINE MIR 95 244 -24 5 1316 429 20 0 0 chr13 95858827 95858877 -24425435 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1316 834 233 80 30 chr13 95859847 95860046 -24424266 + B3A SINE B2 1 209 -7 5 1316 340 244 16 0 chr13 95862754 95862881 -24421431 + (CA)n Simple_repeat Simple_repeat 2 130 0 5 1316 24 0 0 0 chr13 95864350 95864374 -24419938 + AT_rich Low_complexity Low_complexity 1 24 0 5 1316 228 67 0 0 chr13 95864381 95864411 -24419901 + (TG)n Simple_repeat Simple_repeat 2 31 0 5 1316 239 286 136 45 chr13 95864411 95864516 -24419796 - RSINE1 SINE B4 -10 155 40 5 1316 931 296 161 30 chr13 95866168 95866877 -24417435 + L1MB7 LINE L1 5333 6134 -50 5 1316 21 0 0 0 chr13 95867058 95867079 -24417233 + AT_rich Low_complexity Low_complexity 1 21 0 5 1316 963 233 25 0 chr13 95867079 95867281 -24417031 - B3 SINE B2 -8 208 2 6 1316 261 57 0 0 chr13 95867521 95867556 -24416756 + (CAA)n Simple_repeat Simple_repeat 2 36 0 6 1316 432 0 0 0 chr13 95867723 95867771 -24416541 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1316 3467 23 5 2 chr13 95872235 95872630 -24411682 + MTA_Mm LTR MaLR 1 396 0 6 1316 296 248 59 0 chr13 95873600 95873987 -24410325 + G-rich Low_complexity Low_complexity 1 409 0 6 1316 264 262 61 0 chr13 95874060 95874224 -24410088 + G-rich Low_complexity Low_complexity 3 176 0 6 1316 313 242 55 0 chr13 95874203 95874444 -24409868 + G-rich Low_complexity Low_complexity 1 254 0 6 1316 1240 48 0 0 chr13 95876426 95876573 -24407739 + B1_Mm SINE Alu 1 147 0 6 1316 231 36 0 0 chr13 95876573 95876601 -24407711 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1316 381 152 202 0 chr13 95876602 95876681 -24407631 - PB1D10 SINE Alu 0 117 23 6 1316 333 0 0 0 chr13 95876685 95876722 -24407590 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1316 477 0 0 0 chr13 95876722 95876774 -24407538 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1316 230 318 24 0 chr13 95878456 95878541 -24405771 + L2b LINE L2 3283 3369 -6 6 1316 303 241 95 12 chr13 95878593 95878677 -24405635 - PB1D10 SINE Alu -1 116 26 6 1316 277 260 14 0 chr13 95878990 95879063 -24405249 - L1MC5 LINE L1 -68 7893 7820 6 1316 999 107 7 7 chr13 95879080 95879230 -24405082 - URR1A DNA MER1_type 0 226 77 6 1316 426 39 0 0 chr13 95879483 95879535 -24404777 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 1316 487 139 0 12 chr13 95880407 95880487 -24403825 - URR1B DNA MER1_type -1 224 146 6 1316 2432 192 42 7 chr13 95880561 95881018 -24403294 + MT2A LTR ERVL 1 473 -60 6 1316 302 27 0 0 chr13 95881251 95881288 -24403024 + MT2A LTR ERVL 489 525 -8 6 1316 287 319 64 0 chr13 95881298 95881392 -24402920 + MER74A LTR ERVL 30 129 -429 6 1316 341 86 17 0 chr13 95881418 95881476 -24402836 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 1316 3040 136 52 4 chr13 95881678 95882181 -24402131 + RLTR11A LTR ERVK 2 528 0 6 1316 262 264 27 27 chr13 95882325 95882399 -24401913 - PB1D10 SINE Alu -43 74 1 6 1316 613 279 153 34 chr13 95882987 95883336 -24400976 - Tigger6a DNA MER2_type -73 1010 598 6 1316 855 287 137 35 chr13 95883392 95883786 -24400526 - Tigger6a DNA MER2_type -591 492 59 6 1316 376 211 18 18 chr13 95884388 95884499 -24399813 + (TATATG)n Simple_repeat Simple_repeat 6 116 0 6 1316 422 280 191 51 chr13 95884547 95884803 -24399509 - B4A SINE B4 0 292 1 6 1316 544 168 252 0 chr13 95885402 95885521 -24398791 + B1F SINE Alu 1 149 0 6 1316 2894 65 16 95 chr13 95885535 95885701 -24398611 + MusHAL1 LINE L1 1633 1804 -908 6 1316 1151 74 0 20 chr13 95885701 95885852 -24398460 + B1_Mus1 SINE Alu 1 148 0 6 1316 2894 65 16 95 chr13 95885852 95886178 -24398134 + MusHAL1 LINE L1 1805 2086 -626 6 1316 264 309 0 77 chr13 95887202 95887293 -24397019 - B4A SINE B4 0 292 209 6 1316 300 53 0 0 chr13 95887293 95887331 -24396981 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 6 1316 374 306 30 65 chr13 95887331 95887499 -24396813 - RSINE1 SINE B4 -1 164 3 6 1316 362 340 55 26 chr13 95887500 95887671 -24396641 - B4A SINE B4 -52 240 65 6 1316 484 288 0 0 chr13 95887653 95887771 -24396541 - B4A SINE B4 -171 121 4 6 1316 2260 107 3 38 chr13 95887915 95888254 -24396058 + ORR1A2 LTR MaLR 1 327 0 6 1316 378 321 171 5 chr13 95888612 95888828 -24395484 + B4A SINE B4 5 256 -36 6 1316 500 116 12 0 chr13 95888853 95888939 -24395373 + (CA)n Simple_repeat Simple_repeat 1 87 0 6 1316 228 248 64 37 chr13 95889000 95889109 -24395203 + L1M3 LINE L1 5327 5438 -733 6 1316 220 301 96 0 chr13 95889253 95889326 -24394986 - ID2 SINE ID -1 82 3 6 1316 286 256 126 11 chr13 95889515 95889602 -24394710 + RSINE1 SINE B4 56 152 -13 6 1316 228 180 30 76 chr13 95889684 95889750 -24394562 + L1M4 LINE L1 4679 4741 -1405 6 1316 414 253 116 58 chr13 95889761 95889933 -24394379 - B3A SINE B2 -16 182 1 6 1316 374 281 56 21 chr13 95889950 95890092 -24394220 + L1M4 LINE L1 4858 5004 -1142 6 1316 304 167 37 0 chr13 95891208 95891316 -24392996 + (TCTG)n Simple_repeat Simple_repeat 4 115 0 6 1316 883 137 65 0 chr13 95891317 95891456 -24392856 - B1_Mur4 SINE Alu -1 149 2 6 1316 438 20 0 0 chr13 95891456 95891507 -24392805 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 6 1316 509 135 39 23 chr13 95891653 95891782 -24392530 - Lx9 LINE L1 -3 7641 7511 6 1316 1189 165 146 26 chr13 95892267 95892535 -24391777 - Lx9 LINE L1 -217 7427 7128 6 1316 425 143 0 23 chr13 95893020 95893106 -24391206 + (TATG)n Simple_repeat Simple_repeat 2 85 0 6 1316 241 180 60 0 chr13 95893554 95893604 -24390708 - ID_B1 SINE B4 -8 216 164 6 1316 235 94 0 0 chr13 95893776 95893808 -24390504 - L2a LINE L2 -18 3408 3377 6 1316 1623 48 0 9 chr13 95894248 95894459 -24389853 - L1Md_F2 LINE L1 -1 6581 6373 6 1316 256 225 56 0 chr13 95894747 95894818 -24389494 + ID_B1 SINE B4 142 216 -8 6 1316 294 50 0 0 chr13 95894831 95894871 -24389441 + (CAA)n Simple_repeat Simple_repeat 2 41 0 6 1316 475 270 7 21 chr13 95895041 95895181 -24389131 + RSINE1 SINE B4 11 148 -17 6 1316 459 0 0 0 chr13 95895192 95895243 -24389069 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1316 27 0 0 0 chr13 95895243 95895270 -24389042 + AT_rich Low_complexity Low_complexity 1 27 0 6 1316 190 319 160 48 chr13 95899627 95899752 -24384560 - MIR SINE MIR -104 158 20 6 1316 515 74 0 12 chr13 95899801 95899883 -24384429 + (TA)n Simple_repeat Simple_repeat 2 82 0 6 1316 315 0 0 0 chr13 95899889 95899924 -24384388 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1316 765 61 0 0 chr13 95902174 95902273 -24382039 + (GGGA)n Simple_repeat Simple_repeat 3 101 0 6 1316 2394 93 3 0 chr13 95902511 95902856 -24381456 + MTB LTR MaLR 1 346 -54 6 1316 792 161 0 14 chr13 95904285 95904424 -24379888 + RLTR20A LTR ERVK 1 137 -404 6 1316 631 224 58 12 chr13 95904424 95904596 -24379716 + B3A SINE B2 1 180 -18 6 1316 730 71 36 0 chr13 95904601 95904713 -24379599 + (CATA)n Simple_repeat Simple_repeat 4 119 0 6 1316 234 292 27 40 chr13 95904733 95904808 -24379504 + PB1D10 SINE Alu 10 83 -34 6 1316 4019 178 41 5 chr13 95904914 95905706 -24378606 + RMER1B Other Other 162 1338 -4 6 1316 262 310 58 26 chr13 95905793 95905982 -24378330 + L1M5 LINE L1 5271 5465 -659 6 1316 237 324 62 10 chr13 95907556 95907765 -24376547 + L1MEg LINE L1 624 843 -5241 6 1316 241 281 99 30 chr13 95907742 95907944 -24376368 + L1MEg LINE L1 1651 1866 -4218 6 1316 644 275 37 68 chr13 95907975 95908141 -24376171 + B3A SINE B2 1 168 -30 6 1316 348 127 0 0 chr13 95908141 95908196 -24376116 + (CATA)n Simple_repeat Simple_repeat 4 58 0 6 1316 380 275 37 68 chr13 95908196 95908220 -24376092 + B2_Mm2 SINE B2 163 185 -10 6 1316 231 207 180 0 chr13 95908262 95908373 -24375939 + L1MEg LINE L1 858 988 -5096 6 1316 1796 182 51 39 chr13 95908378 95908789 -24375523 + MTC LTR MaLR 6 421 0 6 1316 985 287 94 78 chr13 95908795 95909049 -24375263 + L1MEg LINE L1 992 1228 -4856 6 1316 447 180 140 0 chr13 95909049 95909149 -24375163 + PB1D10 SINE Alu 1 114 -3 6 1316 985 287 94 78 chr13 95909149 95909900 -24374412 + L1MEg LINE L1 1229 2013 -4071 6 1316 235 188 0 0 chr13 95910287 95910335 -24373977 + MTEa LTR MaLR 308 355 -24 6 1316 524 272 74 66 chr13 95910338 95910594 -24373718 - ORR1E LTR MaLR 0 359 102 6 1316 349 316 20 7 chr13 95910724 95910877 -24373435 + L1MC1 LINE L1 5364 5518 -815 6 1316 1447 284 88 9 chr13 95910871 95911429 -24372883 + L1MC1 LINE L1 5624 6225 -108 6 1316 1662 118 45 81 chr13 95911464 95911797 -24372515 + ORR1A4 LTR MaLR 1 321 -8 6 1316 3649 127 108 43 chr13 95912057 95912808 -24371504 + RLTR25B LTR ERVK 38 837 -191 6 1316 680 167 23 16 chr13 95912777 95912905 -24371407 + RLTR25B LTR ERVK 974 1102 -1 6 1316 526 264 0 44 chr13 95913280 95913415 -24370897 - RSINE1 SINE B4 -36 129 1 6 1316 777 262 84 55 chr13 95914813 95915160 -24369152 + ORR1E LTR MaLR 3 359 0 6 1316 2065 147 7 71 chr13 95915761 95916172 -24368140 - ORR1B1 LTR MaLR -9 385 1 6 1316 3042 93 19 5 chr13 95916251 95916673 -24367639 + L1_Mus2 LINE L1 6139 6566 0 6 1316 26 50 0 0 chr13 95916899 95916939 -24367373 + AT_rich Low_complexity Low_complexity 1 40 0 6 1316 21 57 0 0 chr13 95917157 95917192 -24367120 + AT_rich Low_complexity Low_complexity 1 35 0 6 1316 6359 86 23 1 chr13 95918214 95919717 -24364595 - L1VL2 LINE L1 -1789 1826 287 6 1316 286 148 31 62 chr13 95919750 95919815 -24364497 + B2_Mm2 SINE B2 1 63 -132 6 1316 649 206 224 6 chr13 95919826 95919987 -24364325 - B3A SINE B2 0 198 3 6 1316 534 270 0 0 chr13 95920662 95920840 -24363472 + (TG)n Simple_repeat Simple_repeat 2 179 0 6 1316 221 210 0 16 chr13 95920869 95920932 -24363380 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1316 779 199 33 28 chr13 95920932 95921113 -24363199 - B3A SINE B2 -16 182 1 6 1316 235 65 21 21 chr13 95921958 95922005 -24362307 + (TCTG)n Simple_repeat Simple_repeat 2 48 0 6 1316 343 283 35 15 chr13 95922498 95922643 -24361669 + MIR SINE MIR 58 205 -63 6 1316 274 234 0 30 chr13 95923712 95923778 -24360534 - RMER12 LTR ERVK 0 1404 1341 6 1316 954 223 23 18 chr13 95923990 95924209 -24360103 - RLTR21 LTR ERVK -101 1471 1252 6 1316 255 79 0 0 chr13 95924209 95924247 -24360065 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1316 508 191 293 148 chr13 95924247 95924291 -24360021 - RMER12 LTR ERVK -205 1199 1168 6 1316 204 125 0 0 chr13 95924291 95924323 -24359989 + (CATA)n Simple_repeat Simple_repeat 3 34 0 6 1316 2079 193 45 213 chr13 95924323 95924655 -24359657 - RMER12 LTR ERVK -550 772 463 6 1316 1490 84 0 19 chr13 95924655 95924862 -24359450 - L1_Mus1 LINE L1 0 6567 6365 6 1316 2079 193 45 213 chr13 95924862 95925457 -24358855 - RMER12 LTR ERVK -860 462 1 6 1316 211 244 0 62 chr13 95926043 95926091 -24358221 + ID2 SINE ID 1 45 -38 6 1316 503 338 97 5 chr13 95927799 95928171 -24356141 - Lx8 LINE L1 -288 7185 6780 6 1316 1208 310 77 13 chr13 95928815 95929338 -24354974 + MER82 DNA MER2_type 38 593 -60 6 1316 805 89 0 16 chr13 95929410 95929536 -24354776 + (GGAA)n Simple_repeat Simple_repeat 2 125 0 6 1316 246 32 0 0 chr13 95930482 95930513 -24353799 + (A)n Simple_repeat Simple_repeat 1 31 0 6 1316 973 282 163 24 chr13 95930531 95931072 -24353240 + L1MB8 LINE L1 5554 6169 -9 6 1316 218 56 0 27 chr13 95932289 95932326 -24351986 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 1316 366 306 91 40 chr13 95933216 95933492 -24350820 + RMER17C LTR ERVK 70 359 -51 7 1316 493 300 48 17 chr13 95934613 95935021 -24349291 - L1MEc LINE L1 -3654 2665 2235 7 1316 252 0 0 0 chr13 95935600 95935628 -24348684 + (A)n Simple_repeat Simple_repeat 1 28 0 7 1316 1239 181 13 13 chr13 95935941 95936165 -24348147 + URR1B DNA MER1_type 1 224 -1 7 1316 887 250 38 121 chr13 95936585 95936804 -24347508 - B4A SINE B4 -4 288 92 7 1316 330 26 0 0 chr13 95936804 95936843 -24347469 + (TG)n Simple_repeat Simple_repeat 2 40 0 7 1316 887 250 38 121 chr13 95936843 95936937 -24347375 - B4A SINE B4 -201 91 2 7 1316 529 263 60 0 chr13 95937906 95938039 -24346273 - ID_B1 SINE B4 0 224 84 7 1316 460 300 37 48 chr13 95938146 95938335 -24345977 - MER58A DNA MER1_type -9 215 29 7 1316 535 289 80 68 chr13 95939262 95939499 -24344813 - MER45C DNA Tip100 -700 253 14 7 1316 716 178 7 0 chr13 95939802 95939948 -24344364 + GA-rich Low_complexity Low_complexity 1 147 0 7 1316 1203 64 0 0 chr13 95939976 95940133 -24344179 + (GGAGAA)n Simple_repeat Simple_repeat 6 162 0 7 1316 2229 143 39 28 chr13 95940163 95940551 -24343761 + Lx4A LINE L1 6664 7055 -3 7 1316 23 54 0 0 chr13 95940551 95940588 -24343724 + AT_rich Low_complexity Low_complexity 1 37 0 7 1316 21 71 0 0 chr13 95941493 95941535 -24342777 + AT_rich Low_complexity Low_complexity 1 42 0 7 1316 230 229 80 67 chr13 95941943 95941967 -24342345 + B4A SINE B4 194 217 -75 7 1316 180 0 0 0 chr13 95941967 95941987 -24342325 + (TAA)n Simple_repeat Simple_repeat 2 21 0 7 1316 230 229 80 67 chr13 95941987 95942037 -24342275 + B4A SINE B4 218 268 -24 7 1316 321 26 0 0 chr13 95942039 95942077 -24342235 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1316 1379 170 154 57 chr13 95942191 95942336 -24341976 + ORR1C2 LTR MaLR 1 166 -218 7 1316 243 103 0 0 chr13 95942336 95942375 -24341937 + (TCTCTG)n Simple_repeat Simple_repeat 3 41 0 7 1316 1379 170 154 57 chr13 95942375 95942579 -24341733 + ORR1C2 LTR MaLR 167 383 -1 7 1316 389 293 20 0 chr13 95943447 95943546 -24340766 + ID_B1 SINE B4 114 214 -10 7 1316 324 278 96 57 chr13 95943796 95944025 -24340287 - Lx8 LINE L1 0 7473 7236 7 164 399 258 0 51 chr13 95944700 95944798 -24339514 + PB1D10 SINE Alu 4 96 -21 7 1317 243 0 0 0 chr13 95944808 95944835 -24339477 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 7 1317 2564 55 3 58 chr13 95944919 95945265 -24339047 + ORR1A2 LTR MaLR 1 327 0 7 1317 389 287 37 32 chr13 95945290 95945477 -24338835 + L1MEg LINE L1 1045 1232 -4852 7 1317 290 274 81 16 chr13 95945563 95945714 -24338598 - MIR SINE MIR -92 176 10 7 1317 186 133 0 0 chr13 95946321 95946351 -24337961 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 7 1317 250 238 87 19 chr13 95946651 95946754 -24337558 - MLT1A1 LTR MaLR 0 408 299 7 1317 1206 150 19 5 chr13 95946868 95947082 -24337230 + URR1A DNA MER1_type 6 222 -4 7 1317 382 290 38 71 chr13 95947082 95947096 -24337216 - CYRA11_Mm Unknown Y-chromosome -227 307 161 7 1317 434 173 89 17 chr13 95948017 95948135 -24336177 - Lx7 LINE L1 -11 7685 7575 7 1317 222 208 0 0 chr13 95948138 95948186 -24336126 + CT-rich Low_complexity Low_complexity 4 51 0 7 1317 567 153 0 0 chr13 95948210 95948308 -24336004 + (TAG)n Simple_repeat Simple_repeat 1 98 0 7 1317 204 40 0 0 chr13 95948311 95948336 -24335976 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 7 1317 842 240 135 0 chr13 95948401 95948630 -24335682 - Lx7 LINE L1 -552 7144 6885 7 1317 881 155 7 7 chr13 95948680 95948829 -24335483 + B1_Mur3 SINE Alu 1 149 0 7 1317 565 287 58 77 chr13 95949173 95949196 -24335116 + L1MB8 LINE L1 5565 5587 -597 7 1317 2736 89 2 79 chr13 95949196 95949625 -24334687 - MTA_Mm LTR MaLR 0 396 1 7 1317 568 271 35 82 chr13 95949625 95949964 -24334348 + L1MB8 LINE L1 5588 5920 -258 7 1317 1871 100 14 1 chr13 95950050 95950326 -24333986 + L1VL4 LINE L1 186 671 -5631 7 1317 3505 152 77 5 chr13 95950328 95950967 -24333345 + RLTR17 LTR ERVK 1 685 -7 7 1317 243 0 0 0 chr13 95950967 95950994 -24333318 + (CACAA)n Simple_repeat Simple_repeat 1 27 0 7 1317 2278 51 9 16 chr13 95950995 95951078 -24333234 + MusHAL1 LINE L1 471 556 -2798 7 1317 8319 33 6 2 chr13 95951078 95952047 -24332265 + L1Md_F2 LINE L1 5610 6582 0 7 1317 7503 44 12 10 chr13 95952047 95953133 -24331179 + MusHAL1 LINE L1 557 1640 -1713 7 1317 7483 108 22 8 chr13 95953136 95954552 -24329760 + Lx2 LINE L1 5205 6643 -354 7 1317 1476 121 0 0 chr13 95954552 95954767 -24329545 + Lx2 LINE L1 6775 6989 -8 7 1317 771 42 0 0 chr13 95954989 95955084 -24329228 + (CA)n Simple_repeat Simple_repeat 1 95 0 7 1317 677 299 72 0 chr13 95955113 95955334 -24328978 + B4A SINE B4 52 288 -4 7 1317 351 0 0 0 chr13 95955348 95955387 -24328925 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1317 189 0 0 0 chr13 95955950 95955971 -24328341 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1317 314 297 41 67 chr13 95957289 95957484 -24326828 - MIRb SINE MIR -77 191 2 7 1317 227 285 126 31 chr13 95958041 95958168 -24326144 + L1MEf LINE L1 287 425 -6122 7 1317 782 66 0 4 chr13 95958283 95958402 -24325910 - L1_Mus1 LINE L1 0 6582 6462 7 1317 1677 308 115 23 chr13 95958506 95958928 -24325384 + L1MEf LINE L1 682 1158 -5482 7 1317 1138 289 111 29 chr13 95958928 95959405 -24324907 + MLT2B1 LTR ERVL 1 516 -4 7 1317 1677 303 140 36 chr13 95959405 95959561 -24324751 + L1MEf LINE L1 1159 1318 -5322 7 1317 1743 178 85 6 chr13 95959561 95959901 -24324411 - ORR1B2 LTR MaLR 0 367 1 7 1317 1677 303 140 36 chr13 95959901 95960820 -24323492 + L1MEf LINE L1 1319 2373 -4267 7 1317 189 0 0 0 chr13 95960820 95960841 -24323471 + (CA)n Simple_repeat Simple_repeat 2 22 0 7 1317 1677 276 203 34 chr13 95960841 95961407 -24322905 + L1MEf LINE L1 2374 3005 -3539 7 1317 344 246 73 16 chr13 95961582 95961706 -24322606 + L2 LINE L2 2043 2173 -1246 7 1317 198 292 150 0 chr13 95962089 95962202 -24322110 + MIR SINE MIR 2 131 -131 7 1317 358 255 0 47 chr13 95962236 95962343 -24321969 - MLT1A1 LTR MaLR -8 400 299 7 1317 186 316 105 0 chr13 95962606 95962682 -24321630 + MIR SINE MIR 154 237 -25 7 1317 237 320 134 45 chr13 95962693 95962850 -24321462 - MER104 DNA Tc2 -7 174 4 7 1317 346 311 97 16 chr13 95962900 95963086 -24321226 + L2a LINE L2 3226 3426 0 7 1317 573 76 0 0 chr13 95963260 95963339 -24320973 + (TGGA)n Simple_repeat Simple_repeat 4 82 0 7 1317 1067 107 89 6 chr13 95964714 95964893 -24319419 + B2_Mm2 SINE B2 1 194 -1 7 1317 1782 107 40 61 chr13 95965025 95965353 -24318959 - ORR1A4 LTR MaLR -8 321 1 7 1317 324 0 0 0 chr13 95966075 95966111 -24318201 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1317 399 227 59 29 chr13 95966616 95966752 -24317560 - B1F SINE Alu -9 140 1 7 1317 583 266 100 31 chr13 95967500 95967710 -24316602 + B4A SINE B4 2 229 -63 7 1317 606 218 52 15 chr13 95967710 95967845 -24316467 + B1_Mur2 SINE Alu 2 141 -8 7 1317 583 266 100 31 chr13 95967845 95967863 -24316449 + B4A SINE B4 230 246 -46 7 1317 182 174 0 21 chr13 95967863 95967910 -24316402 + GA-rich Low_complexity Low_complexity 1 46 0 7 1317 221 0 35 0 chr13 95967999 95968028 -24316284 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1317 659 147 0 0 chr13 95968484 95968593 -24315719 - MTC LTR MaLR -220 201 93 7 1317 2667 144 14 5 chr13 95968625 95969038 -24315274 - MTC LTR MaLR -4 417 1 7 1317 429 141 108 11 chr13 95969052 95969145 -24315167 - B1_Mur1 SINE Alu -1 148 47 7 1317 569 275 6 96 chr13 95969401 95969578 -24314734 + B4 SINE B4 37 197 -95 7 1317 273 71 0 0 chr13 95969603 95969645 -24314667 + Tigger5 DNA MER2_type 2186 2227 -179 7 1317 458 219 56 35 chr13 95969628 95969770 -24314542 + ID_B1 SINE B4 78 222 -2 7 1317 464 261 60 36 chr13 95969866 95970033 -24314279 + Tigger5 DNA MER2_type 2210 2380 -26 7 1317 672 281 68 36 chr13 95970119 95970370 -24313942 + ORR1E LTR MaLR 1 259 -100 7 1317 536 97 11 0 chr13 95970381 95970474 -24313838 + (TC)n Simple_repeat Simple_repeat 1 94 0 7 1317 469 211 10 10 chr13 95970474 95970570 -24313742 + ORR1E LTR MaLR 275 370 0 7 1317 367 356 0 0 chr13 95970570 95970674 -24313638 + RSINE1 SINE B4 47 150 -15 7 1317 574 317 64 43 chr13 95972039 95972273 -24312039 + MLT1F2 LTR MaLR 249 487 -73 7 1317 192 308 51 13 chr13 95972353 95972432 -24311880 + L2c LINE L2 3291 3372 -15 7 1317 243 247 32 21 chr13 95973121 95973216 -24311096 + (CATATA)n Simple_repeat Simple_repeat 2 97 0 7 1317 220 119 0 33 chr13 95973331 95973392 -24310920 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 7 1317 1127 63 7 0 chr13 95973393 95973535 -24310777 - B1_Mus2 SINE Alu 0 147 5 7 1317 503 276 7 50 chr13 95973535 95973676 -24310636 - RSINE1 SINE B4 -27 138 4 7 1317 692 172 8 8 chr13 95973807 95973924 -24310388 + B3 SINE B2 2 118 -98 7 1317 369 0 0 0 chr13 95973967 95974008 -24310304 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 1317 212 255 0 0 chr13 95974024 95974071 -24310241 + B2_Mm2 SINE B2 27 73 -122 7 1317 437 333 0 15 chr13 95974434 95974571 -24309741 + B3 SINE B2 77 211 -5 7 1317 1493 72 0 10 chr13 95974694 95974891 -24309421 + B2_Mm2 SINE B2 1 195 0 7 1317 670 310 128 49 chr13 95975909 95976602 -24307710 + L1MC5 LINE L1 6692 7439 -522 7 1317 369 0 0 0 chr13 95977062 95977103 -24307209 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1317 1350 42 6 0 chr13 95977491 95977657 -24306655 + MERVL-int LTR ERVL 5205 5371 -114 7 1317 329 125 26 53 chr13 95977657 95977733 -24306579 + ORR1A3-int LTR MaLR 567 640 -1323 7 1317 321 0 0 0 chr13 95977733 95977771 -24306541 + MERVL-int LTR ERVL 5448 5485 0 7 1317 4027 15 56 0 chr13 95977771 95978238 -24306074 + MT2_Mm LTR ERVL 1 493 0 7 1317 791 52 0 0 chr13 95978238 95978335 -24305977 + L1_Mm LINE L1 4349 4445 -1438 7 1317 299 248 89 89 chr13 95978717 95978863 -24305449 + MER33 DNA MER1_type 57 202 -122 7 1317 1271 255 72 6 chr13 95979515 95979862 -24304450 + ORR1D2 LTR MaLR 1 370 0 7 1317 362 250 108 20 chr13 95979964 95980066 -24304246 + B1F1 SINE Alu 39 149 0 7 1317 441 244 71 125 chr13 95980297 95980648 -24303664 + L1MC5 LINE L1 6883 7214 -747 7 1317 2610 193 55 11 chr13 95980747 95981291 -24303021 + Lx9 LINE L1 7076 7643 -1 7 1317 21 36 0 0 chr13 95981291 95981319 -24302993 + AT_rich Low_complexity Low_complexity 1 28 0 7 1317 392 310 17 22 chr13 95981352 95981530 -24302782 + L1MC5 LINE L1 7317 7493 -468 7 1317 1885 239 65 23 chr13 95981667 95982169 -24302143 + Lx6 LINE L1 6527 7434 -26 7 1317 246 300 184 4 chr13 95982520 95982781 -24301531 + Tigger16a DNA Tigger 590 897 -36 7 1317 850 146 0 40 chr13 95982807 95982957 -24301355 + B1_Mur4 SINE Alu 1 144 -6 8 1317 609 14 0 0 chr13 95982959 95983029 -24301283 + (TGGA)n Simple_repeat Simple_repeat 4 73 0 8 1317 261 119 0 0 chr13 95983030 95983072 -24301240 + (CATG)n Simple_repeat Simple_repeat 1 42 0 8 1317 279 315 52 52 chr13 95983101 95983198 -24301114 + MLT1F2 LTR MaLR 257 353 -207 8 1317 270 0 0 0 chr13 95983664 95983694 -24300618 + (TG)n Simple_repeat Simple_repeat 2 31 0 8 1317 438 285 29 7 chr13 95983944 95984082 -24300230 + B1F SINE Alu 2 142 -7 8 1317 246 264 84 51 chr13 95985223 95985389 -24298923 - B3 SINE B2 0 216 5 8 1317 245 282 26 0 chr13 95986517 95986595 -24297717 + ID4 SINE ID 1 80 -3 8 1317 348 172 0 38 chr13 95987264 95987397 -24296915 + (TCTCTG)n Simple_repeat Simple_repeat 2 129 0 8 1317 926 169 0 0 chr13 95988135 95988283 -24296029 - B1_Mus1 SINE Alu 0 148 1 8 1317 552 271 12 28 chr13 95988957 95989139 -24295173 + MER5A DNA MER1_type 5 172 -6 8 1317 324 0 0 0 chr13 95992278 95992314 -24291998 + (A)n Simple_repeat Simple_repeat 1 36 0 8 1317 33 25 0 0 chr13 95992774 95992814 -24291498 + GC_rich Low_complexity Low_complexity 1 40 0 8 1317 247 252 16 39 chr13 95993031 95993159 -24291153 + C-rich Low_complexity Low_complexity 4 128 0 8 1317 323 311 0 19 chr13 95994255 95994363 -24289949 + PB1D7 SINE Alu 3 108 -12 8 1317 182 59 0 81 chr13 95995749 95995786 -24288526 + (A)n Simple_repeat Simple_repeat 1 34 0 8 1317 204 216 39 0 chr13 95996171 95996222 -24288090 + MIR SINE MIR 78 130 -78 8 1317 26 0 0 0 chr13 95996283 95996309 -24288003 + AT_rich Low_complexity Low_complexity 1 26 0 8 1317 362 327 30 83 chr13 95997191 95997558 -24286754 + L2a LINE L2 3051 3399 -27 8 1317 2054 127 12 0 chr13 95997558 95997880 -24286432 + ORR1A3 LTR MaLR 1 326 0 8 1317 362 327 30 83 chr13 95997880 95997909 -24286403 + L2a LINE L2 3400 3426 0 8 1317 23 0 0 0 chr13 95999567 95999590 -24284722 + AT_rich Low_complexity Low_complexity 1 23 0 8 1317 984 221 86 19 chr13 95999712 95999980 -24284332 - MTD LTR MaLR 0 419 134 8 1317 269 275 14 0 chr13 96000000 96000069 -24284243 - MTC LTR MaLR -349 72 3 1 1317 486 212 79 9 chr13 96000086 96000200 -24284112 + B1F SINE Alu 26 147 -2 2 1317 437 348 0 0 chr13 96000486 96000621 -24283691 + B1F2 SINE Alu 2 136 -13 3 1317 181 83 56 0 chr13 96000621 96000657 -24283655 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 4 1317 306 285 45 32 chr13 96002850 96003006 -24281306 - RMER15 LTR ERVL -5 570 413 5 1317 360 230 19 0 chr13 96003331 96003492 -24280820 + (CA)n Simple_repeat Simple_repeat 1 164 0 6 1317 747 314 75 43 chr13 96003573 96003989 -24280323 + Lx8 LINE L1 7040 7468 -5 7 1317 272 299 202 28 chr13 96004155 96004403 -24279909 + L1MB5 LINE L1 5876 6166 -8 8 1317 254 331 33 14 chr13 96004742 96004898 -24279414 + L1ME2 LINE L1 4224 4387 -1759 9 1317 342 308 106 60 chr13 96005082 96005534 -24278778 + L1ME2 LINE L1 4622 5094 -1052 9 1317 1415 73 21 5 chr13 96005645 96005837 -24278475 + B2_Mm2 SINE B2 1 195 0 1 1317 261 0 0 0 chr13 96005925 96005954 -24278358 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 1317 303 301 121 15 chr13 96006323 96006522 -24277790 + L1ME2 LINE L1 5696 5915 -249 9 1317 712 242 45 86 chr13 96006640 96006921 -24277391 - ORR1E LTR MaLR -105 265 6 1 1317 844 138 0 15 chr13 96007106 96007230 -24277082 + B1_Mm SINE Alu 1 123 -24 1 1317 318 26 0 0 chr13 96007230 96007269 -24277043 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1317 599 266 43 0 chr13 96007288 96007427 -24276885 + B1_Mur1 SINE Alu 3 147 -2 1 1317 267 290 98 38 chr13 96007525 96007708 -24276604 + MLT1B LTR MaLR 1 194 -196 1 1317 252 350 10 0 chr13 96007736 96007833 -24276479 + (CA)n Simple_repeat Simple_repeat 1 98 0 1 1317 270 56 0 0 chr13 96007858 96007894 -24276418 + (G)n Simple_repeat Simple_repeat 1 36 0 1 1317 397 305 18 78 chr13 96007902 96008069 -24276243 + MLT1B LTR MaLR 218 374 -16 1 1317 473 272 57 110 chr13 96008401 96008702 -24275610 + RLTR26 LTR ERVK 177 461 -181 1 1317 319 242 136 8 chr13 96009123 96009248 -24275064 + MTD LTR MaLR 279 419 0 2 1317 572 296 34 5 chr13 96009303 96009507 -24274805 + B3 SINE B2 1 210 -6 2 1317 3757 135 67 78 chr13 96009930 96010319 -24273993 - RMER6A LTR ERVK 0 756 345 2 1317 192 40 0 0 chr13 96010319 96010344 -24273968 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1317 3757 135 67 78 chr13 96010344 96010719 -24273593 - RMER6A LTR ERVK -412 344 1 2 1317 309 330 0 28 chr13 96010760 96010869 -24273443 + L2a LINE L2 2646 2751 -668 2 1317 444 286 84 11 chr13 96010996 96011187 -24273125 + L2a LINE L2 2954 3158 -268 2 1317 970 199 97 0 chr13 96011382 96011588 -24272724 + URR1A DNA MER1_type 1 226 0 2 1317 494 357 71 39 chr13 96012381 96012690 -24271622 + MLT1A1-int LTR MaLR 841 1159 -576 2 1317 602 198 186 28 chr13 96012720 96012897 -24271415 + B3 SINE B2 2 206 -10 2 1317 260 206 0 60 chr13 96012913 96012980 -24271332 + MLT1A1 LTR MaLR 334 396 -12 2 1317 705 24 0 0 chr13 96012998 96013081 -24271231 + (GA)n Simple_repeat Simple_repeat 2 84 0 2 1317 946 202 66 0 chr13 96013100 96013313 -24270999 + MLT1A1-int LTR MaLR 1508 1734 -1 2 1317 721 286 117 29 chr13 96013313 96013415 -24270897 + MLT1A1 LTR MaLR 1 124 -284 2 1317 189 0 0 0 chr13 96013415 96013436 -24270876 + (ATTG)n Simple_repeat Simple_repeat 1 21 0 3 1317 721 286 117 29 chr13 96013436 96013708 -24270604 + MLT1A1 LTR MaLR 125 408 0 2 1317 895 310 127 45 chr13 96013885 96014486 -24269826 - Kanga1c DNA Tc2 -4 725 76 3 1317 1019 275 75 30 chr13 96014928 96015299 -24269013 + MLT1B LTR MaLR 3 390 0 3 1317 241 143 0 0 chr13 96015324 96015359 -24268953 + (TCC)n Simple_repeat Simple_repeat 1 35 0 3 1317 659 192 11 11 chr13 96015359 96015538 -24268774 + CT-rich Low_complexity Low_complexity 1 179 0 3 1317 307 275 108 48 chr13 96015710 96015887 -24268425 + MLT1I LTR MaLR 237 441 -7 3 1317 1374 330 104 28 chr13 96015954 96016781 -24267531 + Lx8 LINE L1 6582 7471 -2 3 1317 1166 48 7 14 chr13 96017758 96017906 -24266406 + B1_Mus1 SINE Alu 1 147 -1 3 1317 203 0 0 36 chr13 96017907 96017935 -24266377 + (TAAAA)n Simple_repeat Simple_repeat 4 30 0 3 1317 315 0 0 0 chr13 96018900 96018935 -24265377 + (TC)n Simple_repeat Simple_repeat 1 35 0 3 1317 336 48 0 0 chr13 96018935 96018976 -24265336 + (CACG)n Simple_repeat Simple_repeat 1 42 0 4 1317 381 32 48 0 chr13 96020546 96020609 -24263703 + (CAAAAA)n Simple_repeat Simple_repeat 3 68 0 4 1317 409 308 16 49 chr13 96021800 96021923 -24262389 + RSINE1 SINE B4 47 165 0 4 1317 287 281 45 0 chr13 96022360 96022449 -24261863 + PB1D7 SINE Alu 23 115 -5 4 1317 550 179 2 37 chr13 96023045 96023167 -24261145 + MTD LTR MaLR 264 405 -14 4 1317 418 321 31 35 chr13 96023169 96023456 -24260856 - L2 LINE L2 -997 2422 2137 4 1317 337 218 75 47 chr13 96024157 96024263 -24260049 - B1F SINE Alu -21 128 20 4 1317 314 300 25 8 chr13 96024170 96024291 -24260021 - ID_B1 SINE B4 -31 193 71 4 1317 356 39 0 0 chr13 96024409 96024460 -24259852 + B1_Mus2 SINE Alu 97 147 0 4 1317 312 172 0 0 chr13 96024460 96024518 -24259794 + A-rich Low_complexity Low_complexity 1 58 0 4 1317 238 326 21 42 chr13 96026164 96026260 -24258052 + LTR33 LTR ERVL 46 139 -376 5 1317 352 269 57 88 chr13 96028336 96028528 -24255784 + MER5A DNA MER1_type 3 188 -1 5 1317 978 113 0 0 chr13 96029377 96029528 -24254784 + (TG)n Simple_repeat Simple_repeat 2 152 0 5 1317 480 246 101 7 chr13 96029529 96029668 -24254644 - B3A SINE B2 -44 154 3 5 1317 525 252 25 8 chr13 96030002 96030122 -24254190 - B1F1 SINE Alu 0 149 28 5 1317 30 0 0 0 chr13 96030958 96030988 -24253324 + GC_rich Low_complexity Low_complexity 1 30 0 5 1317 407 202 0 10 chr13 96031244 96031344 -24252968 + GA-rich Low_complexity Low_complexity 3 101 0 5 1317 1413 185 169 6 chr13 96031754 96032102 -24252210 - MTD LTR MaLR -14 405 1 5 1317 273 298 45 20 chr13 96032120 96032240 -24252072 + B1F SINE Alu 1 117 0 5 1317 218 276 0 17 chr13 96033239 96033298 -24251014 + (CA)n Simple_repeat Simple_repeat 1 58 0 5 1317 501 97 0 0 chr13 96035206 96035278 -24249034 + (TTTC)n Simple_repeat Simple_repeat 1 72 0 6 1317 955 156 8 3 chr13 96035280 96035636 -24248676 + CT-rich Low_complexity Low_complexity 1 358 0 6 1317 223 250 19 0 chr13 96037017 96037069 -24247243 + GA-rich Low_complexity Low_complexity 2 54 0 6 1317 352 253 12 25 chr13 96037242 96037323 -24246989 - ID4_ SINE ID -2 81 2 6 1317 568 326 99 65 chr13 96037582 96038367 -24245945 - L1M5 LINE L1 -920 5226 4415 6 1317 602 304 63 44 chr13 96038368 96038771 -24245541 + L1MA4A LINE L1 5599 5995 -1478 6 1317 409 245 67 10 chr13 96038948 96039115 -24245197 - L1M5 LINE L1 -1718 4428 4255 6 1317 1131 301 129 15 chr13 96039171 96039784 -24244528 + L1ME2z LINE L1 5270 5952 -492 6 1317 910 290 25 7 chr13 96039803 96040088 -24244224 + B4A SINE B4 1 290 -2 6 1317 251 352 22 0 chr13 96040158 96040249 -24244063 + L1ME2z LINE L1 6009 6101 -63 6 1317 533 254 39 113 chr13 96040259 96040490 -24243822 + B3 SINE B2 3 216 0 6 1317 311 177 48 0 chr13 96041190 96041252 -24243060 + ID4_ SINE ID 8 72 -11 6 1317 350 130 18 53 chr13 96041261 96041375 -24242937 + (CAGAGA)n Simple_repeat Simple_repeat 4 113 0 7 1317 287 130 19 0 chr13 96041409 96041463 -24242849 + (GGGA)n Simple_repeat Simple_repeat 4 58 0 7 1317 1121 229 41 102 chr13 96042667 96043061 -24241251 - MTE2a LTR MaLR -1 378 9 7 1317 259 191 0 0 chr13 96043289 96043336 -24240976 - L2b LINE L2 0 3375 3329 7 1317 1447 212 102 11 chr13 96043790 96044171 -24240141 - MTD LTR MaLR 0 419 4 7 1317 599 319 94 40 chr13 96044172 96044567 -24239745 - LTR33A_ LTR ERVL -15 516 101 7 1317 897 95 0 0 chr13 96044938 96045085 -24239227 + (TC)n Simple_repeat Simple_repeat 2 148 0 7 1317 399 41 0 0 chr13 96045142 96045191 -24239121 + (TTA)n Simple_repeat Simple_repeat 3 51 0 7 1317 391 258 35 107 chr13 96045296 96045465 -24238847 - B4A SINE B4 -117 175 19 7 1317 1664 215 74 0 chr13 96045484 96045847 -24238465 + MTD LTR MaLR 30 419 0 7 1317 305 289 73 53 chr13 96046429 96046708 -24237604 - B4 SINE B4 -13 279 1 8 1317 470 329 6 30 chr13 96046745 96046914 -24237398 - RSINE1 SINE B4 0 165 1 8 1317 219 324 46 0 chr13 96046976 96047084 -24237228 + MIRb SINE MIR 42 154 -114 8 1317 286 238 0 0 chr13 96047577 96047640 -24236672 + ID4 SINE ID 2 64 -19 8 1317 387 304 22 7 chr13 96048192 96048328 -24235984 - L2a LINE L2 0 3426 3289 8 1317 210 118 0 0 chr13 96048920 96048954 -24235358 + (TA)n Simple_repeat Simple_repeat 2 35 0 8 1317 315 227 41 0 chr13 96049126 96049223 -24235089 - BC1_Mm scRNA scRNA -42 110 10 8 1317 25 0 0 0 chr13 96049230 96049255 -24235057 + AT_rich Low_complexity Low_complexity 1 25 0 8 1317 636 253 0 20 chr13 96049274 96049423 -24234889 + ID_B1 SINE B4 79 224 0 8 1317 607 283 171 26 chr13 96049712 96049862 -24234450 + Lx8 LINE L1 6877 7063 -410 8 1317 1417 252 60 86 chr13 96049862 96049950 -24234362 + MT2A LTR ERVL 2 67 -466 8 1317 1001 124 12 0 chr13 96049950 96050119 -24234193 + (TTTC)n Simple_repeat Simple_repeat 4 174 0 9 1317 1417 252 60 86 chr13 96050119 96050576 -24233736 + MT2A LTR ERVL 68 533 0 8 1317 607 283 171 26 chr13 96050576 96050770 -24233542 + Lx8 LINE L1 7064 7271 -202 8 1317 648 56 0 0 chr13 96050852 96050941 -24233371 + (TC)n Simple_repeat Simple_repeat 1 89 0 9 1317 369 109 0 0 chr13 96050941 96050996 -24233316 + (TG)n Simple_repeat Simple_repeat 1 55 0 9 1317 349 346 98 28 chr13 96051399 96051613 -24232699 + Lx8 LINE L1 7129 7357 -116 9 1317 324 0 0 0 chr13 96052038 96052074 -24232238 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1317 630 0 0 0 chr13 96052074 96052144 -24232168 + (GA)n Simple_repeat Simple_repeat 1 70 0 9 1317 188 287 43 0 chr13 96052862 96052956 -24231356 + MIR SINE MIR 61 158 -104 9 1317 778 249 58 59 chr13 96053862 96054180 -24230132 + MTE2a LTR MaLR 44 358 -61 9 1317 230 358 126 34 chr13 96054606 96054869 -24229443 - MLT1F2 LTR MaLR -240 320 34 9 1317 733 318 129 110 chr13 96054898 96055421 -24228891 - MLT1F2-int LTR MaLR 0 1489 1005 9 1317 1260 102 26 21 chr13 96055421 96055611 -24228701 - B2_Mm2 SINE B2 -3 192 2 9 1317 733 318 129 110 chr13 96055611 96056055 -24228257 - MLT1F2-int LTR MaLR -485 1004 513 9 1317 881 174 0 13 chr13 96056055 96056206 -24228106 - B1_Mur2 SINE Alu 0 149 1 1 1317 359 316 41 21 chr13 96056206 96056399 -24227913 - B3A SINE B2 0 198 1 1 1317 643 315 31 17 chr13 96056399 96056597 -24227715 - MLT1F2-int LTR MaLR -787 584 338 9 1317 594 41 0 0 chr13 96056672 96056745 -24227567 + (TA)n Simple_repeat Simple_repeat 2 74 0 1 1317 459 125 0 0 chr13 96056815 96056887 -24227425 + (T)n Simple_repeat Simple_repeat 1 72 0 1 1317 417 267 8 25 chr13 96057226 96057345 -24226967 + PB1D10 SINE Alu 1 117 0 1 1317 229 319 115 62 chr13 96057449 96057806 -24226506 - L3 LINE CR1 -147 4342 3967 1 1317 225 321 98 33 chr13 96058185 96058430 -24225882 - L3b LINE CR1 -218 264 4 1 1317 547 276 62 7 chr13 96058773 96058919 -24225393 + RSINE1 SINE B4 2 155 -10 1 1317 508 292 11 67 chr13 96059016 96059031 -24225281 - B3A SINE B2 0 198 184 1 1317 375 78 0 0 chr13 96059031 96059082 -24225230 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1317 734 241 12 38 chr13 96059082 96059246 -24225066 - B3 SINE B2 -32 184 29 1 1317 504 0 0 0 chr13 96059260 96059316 -24224996 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1317 735 12 0 0 chr13 96059316 96059399 -24224913 + (CA)n Simple_repeat Simple_repeat 1 84 0 1 1317 932 274 50 11 chr13 96059685 96059962 -24224350 + B4 SINE B4 3 290 -2 1 1317 593 247 36 42 chr13 96060252 96060417 -24223895 + RSINE1 SINE B4 2 165 0 1 1317 243 267 22 34 chr13 96060958 96061047 -24223265 + MTEb LTR MaLR 281 368 -11 1 1317 462 221 0 10 chr13 96061551 96061647 -24222665 + PB1 SINE Alu 30 124 -3 1 1317 229 200 0 0 chr13 96061713 96061763 -24222549 + (TCTCTG)n Simple_repeat Simple_repeat 4 53 0 1 1317 421 292 53 0 chr13 96061906 96062019 -24222293 + PB1D7 SINE Alu 2 120 0 1 1317 537 231 123 0 chr13 96062704 96062834 -24221478 + ID_B1 SINE B4 78 223 -1 1 1317 1303 294 100 30 chr13 96063577 96064148 -24220164 + MTE-int LTR MaLR 280 890 -690 1 1317 21095 117 18 25 chr13 96064165 96068492 -24215820 + L1_Mus4 LINE L1 2349 6636 0 1 1317 406 267 118 11 chr13 96068532 96068710 -24215602 + LTR16B1 LTR ERVL 202 398 -82 1 1317 681 13 0 0 chr13 96068714 96068792 -24215520 + (TCTCCC)n Simple_repeat Simple_repeat 2 79 0 1 1317 516 82 0 0 chr13 96068794 96068867 -24215445 - B2_Mm1t SINE B2 -19 174 102 1 1317 2771 229 39 10 chr13 96068867 96069458 -24214854 - Lx7 LINE L1 -965 6731 6124 1 1317 312 91 0 0 chr13 96069777 96069821 -24214491 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1317 286 208 26 94 chr13 96069974 96070091 -24214221 - MLT1H LTR MaLR -35 514 406 1 1317 247 336 49 35 chr13 96070173 96070315 -24213997 - MLT1H2 LTR MaLR -305 184 41 1 1317 1076 209 34 15 chr13 96070355 96070559 -24213753 + B3 SINE B2 1 208 -8 1 1317 441 0 0 0 chr13 96070586 96070635 -24213677 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1317 516 84 0 0 chr13 96070635 96070717 -24213595 + (TG)n Simple_repeat Simple_repeat 2 84 0 1 1317 592 211 15 22 chr13 96070718 96070854 -24213458 - B3A SINE B2 -30 168 34 1 1317 263 261 64 64 chr13 96071041 96071135 -24213177 + Lx7 LINE L1 7047 7140 -556 1 1317 580 291 119 7 chr13 96071117 96071394 -24212918 + HAL1 LINE L1 1441 1748 -759 1 1317 239 104 21 0 chr13 96071395 96071443 -24212869 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1 1317 375 23 0 0 chr13 96071583 96071627 -24212685 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1317 296 194 0 0 chr13 96071751 96071818 -24212494 + T-rich Low_complexity Low_complexity 6 72 0 1 1317 876 123 87 0 chr13 96071818 96071956 -24212356 - B1_Mur4 SINE Alu 0 150 1 1 1317 228 313 23 8 chr13 96072349 96072481 -24211831 + Lx8 LINE L1 1869 2002 -3845 1 1317 2575 62 65 0 chr13 96072613 96072938 -24211374 - ORR1A1 LTR MaLR 0 346 1 1 1317 1505 278 135 47 chr13 96072949 96073127 -24211185 + Lx8 LINE L1 4883 5082 -765 1 1317 1473 203 103 23 chr13 96073127 96073515 -24210797 - MTD LTR MaLR 0 419 1 1 1317 4156 291 82 61 chr13 96073515 96075179 -24209133 + Lx8 LINE L1 5083 6779 -694 1 1317 1020 87 29 0 chr13 96075179 96075317 -24208995 - B1_Mus1 SINE Alu -6 142 1 1 164 4156 299 43 71 chr13 96075317 96076003 -24208309 + Lx8 LINE L1 6780 7466 -7 1 1318 611 293 19 75 chr13 96076023 96076237 -24208075 + B4 SINE B4 89 290 -2 1 1318 360 155 0 0 chr13 96076240 96076311 -24208001 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1318 432 0 0 0 chr13 96077956 96078004 -24206308 + (GA)n Simple_repeat Simple_repeat 1 48 0 1 1318 531 292 130 45 chr13 96078018 96078287 -24206025 - B4A SINE B4 0 292 1 1 1318 583 263 112 23 chr13 96079793 96080113 -24204199 - L1MB3 LINE L1 -5 6178 5799 1 1318 452 285 24 0 chr13 96080181 96080304 -24204008 + B1F SINE Alu 1 126 -23 1 1318 369 0 0 0 chr13 96080861 96080902 -24203410 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 1 1318 369 62 0 0 chr13 96081508 96081556 -24202756 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 1 1318 1118 102 0 0 chr13 96081556 96081703 -24202609 - B1_Mus1 SINE Alu 0 148 2 1 1318 1404 98 0 5 chr13 96082570 96082764 -24201548 - B2_Mm2 SINE B2 -2 193 1 1 1318 1200 111 0 0 chr13 96083420 96083600 -24200712 + (GGA)n Simple_repeat Simple_repeat 1 180 0 1 1318 921 266 118 40 chr13 96083722 96084173 -24200139 - MER97c DNA MER1_type? -232 858 373 1 1318 426 314 50 27 chr13 96085212 96085431 -24198881 - L1MB3 LINE L1 -34 6149 5926 1 1318 207 139 0 0 chr13 96085939 96085975 -24198337 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1318 609 308 43 5 chr13 96086495 96086704 -24197608 + ORR1E LTR MaLR 23 239 -120 1 1318 808 267 0 6 chr13 96086795 96086976 -24197336 - ID_B1 SINE B4 -10 214 35 1 1318 3496 89 100 11 chr13 96087261 96087782 -24196530 + RMER2 LTR ERV1 1 567 0 1 1318 272 261 111 55 chr13 96088781 96088980 -24195332 + L1M4 LINE L1 3292 3501 -2645 1 1318 3489 269 90 21 chr13 96088990 96090169 -24194143 + Lx8 LINE L1 6210 7469 -4 1 1318 216 374 44 69 chr13 96090263 96090467 -24193845 - L4 LINE RTE -614 1415 1217 1 1318 275 265 0 0 chr13 96090854 96090922 -24193390 - PB1D10 SINE Alu -8 109 42 1 1318 211 296 60 24 chr13 96091621 96091704 -24192608 + B4A SINE B4 82 167 -125 1 1318 259 315 10 42 chr13 96091630 96091726 -24192586 + B1F1 SINE Alu 11 103 -46 1 1318 476 294 0 16 chr13 96091746 96091874 -24192438 + RSINE1 SINE B4 5 130 -35 1 1318 237 135 0 0 chr13 96091897 96091949 -24192363 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1318 266 214 143 0 chr13 96092114 96092184 -24192128 - PB1 SINE Alu -5 122 43 1 1318 1874 40 0 0 chr13 96092418 96092644 -24191668 - L1Md_A LINE L1 0 6582 6357 1 1318 1723 258 113 15 chr13 96092708 96093307 -24191005 + Lx7 LINE L1 6645 7302 -394 1 1318 1033 232 97 71 chr13 96093317 96093809 -24190503 + MT2B LTR ERVL 1 594 -7 1 1318 218 268 0 0 chr13 96094172 96094243 -24190069 + T-rich Low_complexity Low_complexity 1 71 0 1 1318 229 200 0 0 chr13 96094262 96094302 -24190010 + MLT1I LTR MaLR 98 137 -274 1 1318 570 169 59 8 chr13 96096014 96096133 -24188179 - B1_Mur1 SINE Alu -1 148 24 1 1318 195 184 0 0 chr13 96096278 96096316 -24187996 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 1 1318 235 323 23 16 chr13 96096636 96096765 -24187547 - B3A SINE B2 -68 130 1 1 1318 456 224 144 63 chr13 96097357 96097628 -24186684 - RMER10A LTR ERVL -143 299 7 1 1318 245 282 0 14 chr13 96097670 96097742 -24186570 + ID4 SINE ID 6 76 -7 1 1318 243 0 0 0 chr13 96097742 96097769 -24186543 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 1 1318 210 280 187 0 chr13 96097916 96097991 -24186321 - RSINE1 SINE B4 -74 91 3 1 1318 362 330 9 0 chr13 96099709 96099824 -24184488 + Tigger5 DNA MER2_type 2291 2406 0 1 1318 180 0 0 0 chr13 96099912 96099932 -24184380 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1 1318 369 299 117 10 chr13 96101710 96101849 -24182463 - L1M2 LINE L1 -553 5738 5588 1 1318 246 62 0 0 chr13 96101849 96101881 -24182431 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1318 369 299 117 10 chr13 96101881 96101947 -24182365 - L1M2 LINE L1 -704 5587 5512 1 1318 609 290 170 24 chr13 96102029 96102576 -24181736 - L1M2 LINE L1 -861 5282 4656 1 1318 1469 300 172 31 chr13 96102724 96104367 -24179945 - L1M2 LINE L1 -1475 4668 2794 1 1318 419 268 54 47 chr13 96104977 96105126 -24179186 + RSINE1 SINE B4 3 152 -13 1 1318 254 296 42 0 chr13 96105673 96105744 -24178568 - ID4 SINE ID -6 77 4 1 1318 727 144 267 29 chr13 96107780 96107952 -24176360 - B3 SINE B2 -3 213 1 1 1318 321 264 92 0 chr13 96108179 96108266 -24176046 - B1_Mus2 SINE Alu -40 107 13 1 1318 463 252 73 44 chr13 96108680 96108817 -24175495 + RSINE1 SINE B4 11 151 -14 1 1318 320 276 61 10 chr13 96109020 96109119 -24175193 + PB1D10 SINE Alu 8 111 -6 1 1318 510 175 133 0 chr13 96109834 96109954 -24174358 - B1_Mur1 SINE Alu 0 149 14 1 1318 525 291 108 89 chr13 96111162 96111532 -24172780 + MTD LTR MaLR 3 379 0 1 1318 922 143 7 7 chr13 96111796 96111937 -24172375 + B1_Mus1 SINE Alu 1 141 -7 1 1318 639 0 0 0 chr13 96111937 96112008 -24172304 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1 1318 521 234 62 0 chr13 96112011 96112139 -24172173 + B1F SINE Alu 6 141 -8 1 1318 381 256 204 0 chr13 96112374 96112550 -24171762 - MLT1D LTR MaLR -32 473 262 1 1318 230 222 56 0 chr13 96112645 96112699 -24171613 - MLT1D LTR MaLR -559 68 12 1 1318 266 236 14 14 chr13 96112984 96113057 -24171255 + ID4_ SINE ID 2 74 -9 1 1318 1168 85 107 6 chr13 96113084 96113261 -24171051 + B2_Mm2 SINE B2 1 195 0 1 1318 292 215 134 45 chr13 96113261 96113373 -24170939 + MIRb SINE MIR 66 187 -81 1 1318 1263 104 5 58 chr13 96114903 96115108 -24169204 - B2_Mm2 SINE B2 0 195 2 1 1318 207 0 0 0 chr13 96115410 96115433 -24168879 + (TCTCTG)n Simple_repeat Simple_repeat 2 24 0 2 1318 225 267 154 35 chr13 96115530 96115665 -24168647 - MIRb SINE MIR -112 164 11 2 1318 24 32 0 0 chr13 96115710 96115741 -24168571 + GC_rich Low_complexity Low_complexity 1 31 0 2 1318 538 269 49 14 chr13 96115999 96116142 -24168170 - RSINE1 SINE B4 -7 158 11 2 1318 1759 176 51 35 chr13 96116374 96116745 -24167567 + MTC LTR MaLR 1 377 -44 2 1318 1016 95 24 0 chr13 96116748 96116916 -24167396 + (TTC)n Simple_repeat Simple_repeat 2 173 0 2 1318 1033 88 131 29 chr13 96119042 96119217 -24165095 + B2_Mm2 SINE B2 1 193 -2 2 1318 468 0 0 0 chr13 96119494 96119546 -24164766 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1318 987 68 0 141 chr13 96119982 96120152 -24164160 + B1_Mus2 SINE Alu 2 147 0 2 1318 189 0 0 0 chr13 96120152 96120173 -24164139 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1318 878 152 0 20 chr13 96122109 96122257 -24162055 + B1_Mur3 SINE Alu 1 145 -4 2 1318 293 171 0 38 chr13 96122265 96122344 -24161968 + (TAAA)n Simple_repeat Simple_repeat 2 77 0 2 1318 328 319 78 29 chr13 96124755 96125189 -24159123 - L1MC LINE L1 -405 5837 5375 2 1318 478 242 224 18 chr13 96125262 96125481 -24158831 + ORR1E LTR MaLR 55 318 -41 2 1318 749 150 0 0 chr13 96125503 96125623 -24158689 - B1_Mur3 SINE Alu 0 149 30 2 1318 338 147 73 0 chr13 96125632 96125700 -24158612 + ORR1E LTR MaLR 298 370 0 2 1318 261 284 68 17 chr13 96125839 96125957 -24158355 - L1M5 LINE L1 -891 5255 5132 2 1318 338 252 258 0 chr13 96126046 96126205 -24158107 - B4A SINE B4 -48 244 45 2 1318 325 212 8 100 chr13 96126494 96126632 -24157680 - L1_Rod LINE L1 -412 5888 5688 2 1318 246 259 95 36 chr13 96126637 96126805 -24157507 + Lx9 LINE L1 5828 6005 -1639 2 1318 758 248 140 59 chr13 96127854 96128176 -24156136 + MTE2b LTR MaLR 3 350 -29 2 1318 902 192 14 43 chr13 96129488 96129695 -24154617 + B3 SINE B2 3 203 -13 2 1318 21 0 0 0 chr13 96129698 96129719 -24154593 + AT_rich Low_complexity Low_complexity 1 21 0 2 1318 23 0 0 0 chr13 96129821 96129844 -24154468 + AT_rich Low_complexity Low_complexity 1 23 0 2 1318 467 258 11 0 chr13 96129904 96129997 -24154315 - RSINE1 SINE B4 -13 152 59 2 1318 287 296 131 26 chr13 96130054 96130245 -24154067 - L1M5 LINE L1 -646 5594 5384 2 1318 433 200 12 0 chr13 96131252 96131332 -24152980 - B1_Mus2 SINE Alu -2 145 65 2 1318 313 226 191 36 chr13 96131810 96131920 -24152392 + PB1 SINE Alu 1 127 0 2 1318 416 271 48 24 chr13 96131938 96132063 -24152249 + ID_B1 SINE B4 84 211 -13 2 1318 403 240 50 0 chr13 96132244 96132344 -24151968 - B1F SINE Alu -1 148 44 2 1318 358 117 17 0 chr13 96132976 96133036 -24151276 - RLTR28 LTR ERVL -32 492 432 2 1318 506 214 9 0 chr13 96133039 96133151 -24151161 - RLTR28 LTR ERVL -411 113 1 2 1318 238 53 184 0 chr13 96134047 96134085 -24150227 - RLTR28 LTR ERVL -436 45 1 2 1318 625 206 43 0 chr13 96135342 96135483 -24148829 - B1_Mur4 SINE Alu 0 150 4 2 1318 249 312 11 21 chr13 96135483 96135515 -24148797 - B4A SINE B4 -205 87 57 2 1318 225 367 25 0 chr13 96135944 96136023 -24148289 + ID SINE ID 2 82 -142 2 1318 293 0 0 26 chr13 96137225 96137263 -24147049 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2 1318 402 261 104 38 chr13 96137263 96137446 -24146866 + B3A SINE B2 3 197 -19 2 1318 704 188 15 0 chr13 96137517 96137650 -24146662 - B1_Mus2 SINE Alu -11 136 2 2 1318 216 0 0 0 chr13 96137977 96138001 -24146311 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2 1318 1208 61 0 0 chr13 96138010 96138157 -24146155 + B1_Mus2 SINE Alu 1 147 0 2 1318 21 0 0 0 chr13 96139603 96139624 -24144688 + AT_rich Low_complexity Low_complexity 1 21 0 2 1318 280 291 23 11 chr13 96140057 96140144 -24144168 + PB1 SINE Alu 36 123 -4 2 1318 310 241 44 113 chr13 96140234 96140393 -24143919 - RSINE1 SINE B4 -16 149 2 2 1318 349 311 40 16 chr13 96140470 96140594 -24143718 + PB1 SINE Alu 1 127 0 2 1318 295 243 86 51 chr13 96141156 96141273 -24143039 + B1F SINE Alu 29 149 0 2 1318 226 338 26 26 chr13 96141827 96141903 -24142409 - AluG_3 SINE Alu -96 215 140 2 1318 343 214 226 0 chr13 96141945 96142029 -24142283 + PB1D9 SINE Alu 5 107 -13 2 1318 263 276 39 13 chr13 96142070 96142147 -24142165 + ID4_ SINE ID 5 83 0 2 1318 245 29 0 29 chr13 96143117 96143152 -24141160 + (TTA)n Simple_repeat Simple_repeat 3 36 0 2 1318 242 241 17 17 chr13 96143162 96143221 -24141091 - tRNA-Ala-GCY_ tRNA tRNA -4 71 13 2 1318 250 182 0 29 chr13 96143393 96143461 -24140851 + GA-rich Low_complexity Low_complexity 2 67 0 2 1318 252 216 36 134 chr13 96143491 96143603 -24140709 + B3A SINE B2 10 110 -88 2 1318 591 286 47 35 chr13 96143515 96143772 -24140540 + B4A SINE B4 33 292 0 2 1318 216 211 184 0 chr13 96144243 96144319 -24139993 + PB1D10 SINE Alu 9 98 -19 2 1318 372 214 18 117 chr13 96144386 96144497 -24139815 + ID_B1 SINE B4 86 185 -39 2 1318 29 28 0 0 chr13 96145790 96145826 -24138486 + AT_rich Low_complexity Low_complexity 1 36 0 2 1318 368 282 75 89 chr13 96145880 96146143 -24138169 + L1MA4 LINE L1 5663 5937 -234 2 1318 326 277 143 0 chr13 96146486 96146598 -24137714 + B1F2 SINE Alu 1 128 -21 2 1318 299 264 0 0 chr13 96146596 96146668 -24137644 + PB1D10 SINE Alu 40 111 -6 2 1318 301 206 68 14 chr13 96146700 96146774 -24137538 + ID4 SINE ID 3 80 -3 2 1318 3370 57 33 2 chr13 96146786 96147209 -24137103 + RLTR10C LTR ERVK 1 436 0 2 1318 402 21 0 0 chr13 96147210 96147257 -24137055 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1318 309 312 21 11 chr13 96147288 96147382 -24136930 + B3A SINE B2 97 191 -7 2 1318 377 191 85 0 chr13 96147430 96147524 -24136788 + PB1D10 SINE Alu 10 111 -6 2 1318 2173 19 119 0 chr13 96147692 96147952 -24136360 + RLTR10B LTR ERVK 2 292 0 2 1318 2800 142 94 8 chr13 96148714 96149225 -24135087 - RLTR17 LTR ERVK -2 690 136 2 1318 302 247 33 22 chr13 96149223 96149314 -24134998 + PB1 SINE Alu 24 115 -12 2 1318 492 289 30 0 chr13 96149788 96149923 -24134389 + ID_B1 SINE B4 80 218 -6 2 1318 243 0 0 0 chr13 96150073 96150100 -24134212 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1318 460 137 0 0 chr13 96150728 96150801 -24133511 + B1_Mur1 SINE Alu 74 146 -3 2 1318 2876 41 21 0 chr13 96151108 96151165 -24133147 - ORR1A0 LTR MaLR 0 346 290 2 1318 228 35 0 0 chr13 96151165 96151194 -24133118 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1318 2876 41 21 0 chr13 96151194 96151475 -24132837 - ORR1A0 LTR MaLR -57 289 2 2 1318 257 0 30 0 chr13 96151862 96151895 -24132417 + (TTATA)n Simple_repeat Simple_repeat 3 36 0 2 1318 241 214 143 0 chr13 96153798 96153868 -24130444 + B4 SINE B4 201 280 -12 2 1318 1141 89 0 22 chr13 96153883 96154066 -24130246 + (GGGA)n Simple_repeat Simple_repeat 2 180 0 2 1318 3740 117 131 126 chr13 96154090 96154992 -24129320 + RMER17B LTR ERVK 1 958 0 2 1318 383 212 0 117 chr13 96155875 96156003 -24128309 + MT2B LTR ERVL 152 264 -337 2 1318 875 96 0 0 chr13 96155900 96156025 -24128287 + B1_Mus1 SINE Alu 11 135 -13 2 1318 478 261 60 0 chr13 96156057 96156199 -24128113 + B3A SINE B2 4 159 -57 2 1318 472 266 6 92 chr13 96156471 96156645 -24127667 + RSINE1 SINE B4 3 161 -4 2 1318 483 140 6 60 chr13 96156655 96156837 -24127475 + (CA)n Simple_repeat Simple_repeat 1 172 0 2 1318 424 159 5 74 chr13 96156866 96157056 -24127256 + (CA)n Simple_repeat Simple_repeat 1 177 0 2 1318 372 22 0 0 chr13 96157493 96157538 -24126774 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1318 282 314 0 29 chr13 96158040 96158145 -24126167 - MER57A-int LTR ERV1 -271 5916 5815 2 1318 458 265 15 18 chr13 96158310 96158443 -24125869 + B3A SINE B2 48 180 -18 2 1318 262 206 36 134 chr13 96159785 96159797 -24124515 - ID_B1 SINE B4 -1 223 214 2 1318 431 0 37 0 chr13 96159797 96159851 -24124461 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 2 1318 262 206 36 134 chr13 96159851 96159950 -24124362 - ID_B1 SINE B4 -11 213 123 2 1318 633 240 13 57 chr13 96159952 96160111 -24124201 - ID_B1 SINE B4 -72 152 1 2 1318 519 199 226 72 chr13 96160895 96161090 -24123222 - URR1B DNA MER1_type 0 225 1 2 1318 2256 217 11 79 chr13 96161603 96162245 -24122067 + RMER19C LTR ERVK 12 609 -2 2 1318 588 81 0 0 chr13 96162354 96162441 -24121871 + (CA)n Simple_repeat Simple_repeat 2 88 0 2 1318 580 240 8 127 chr13 96162604 96162713 -24121599 + ID_B1 SINE B4 2 222 0 2 1318 1032 84 0 0 chr13 96162713 96162855 -24121457 + B1_Mus1 SINE Alu 7 148 0 2 1318 777 158 174 12 chr13 96164808 96164975 -24119337 + B2_Mm2 SINE B2 1 194 -1 2 1318 496 272 48 8 chr13 96165157 96165309 -24119003 - B3A SINE B2 -14 202 41 2 1318 3654 117 29 9 chr13 96165378 96165931 -24118381 - LTRIS2 LTR ERV1 0 564 1 2 1318 293 208 0 0 chr13 96165932 96165985 -24118327 - B3A SINE B2 -105 93 41 2 1318 490 29 14 14 chr13 96166093 96166162 -24118150 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 2 1318 536 254 171 69 chr13 96166196 96166530 -24117782 - RLTR9A LTR ERVK 0 368 1 2 1318 325 207 0 0 chr13 96166790 96166848 -24117464 - RNERVK23-int LTR ERVK -701 7516 7459 2 1318 19460 110 30 31 chr13 96166834 96169542 -24114770 - RMER16-int LTR ERVK -1068 4338 1595 2 1318 5812 3 0 0 chr13 96169542 96170173 -24114139 - L1Md_A LINE L1 0 6582 5952 2 1318 19460 110 30 31 chr13 96170173 96170498 -24113814 - RMER16-int LTR ERVK -3812 1594 1310 2 1318 990 192 91 55 chr13 96170500 96170810 -24113502 - RLTR45-int LTR ERVK -4903 2341 2067 2 1318 448 241 231 51 chr13 96171253 96171564 -24112748 - RLTR9A LTR ERVK 0 368 2 2 1318 372 289 80 85 chr13 96171933 96172145 -24112167 + Lx8 LINE L1 7052 7262 -211 3 1318 242 329 13 0 chr13 96172146 96172225 -24112087 + RMER15 LTR ERVL 426 505 -70 3 1318 1033 169 0 53 chr13 96172376 96172480 -24111832 - ORR1D1 LTR MaLR -161 213 115 3 1318 836 20 0 10 chr13 96172480 96172583 -24111729 + (TTC)n Simple_repeat Simple_repeat 2 103 0 3 1318 1156 62 0 14 chr13 96172584 96172731 -24111581 - B1_Mm SINE Alu -1 146 2 3 1318 1033 169 0 53 chr13 96172731 96172849 -24111463 - ORR1D1 LTR MaLR -260 114 1 3 1318 5550 225 50 36 chr13 96172849 96172967 -24111345 - ORR1D1-int LTR MaLR 0 1370 1258 3 1318 1394 69 15 36 chr13 96172967 96173163 -24111149 + B2_Mm2 SINE B2 2 193 -2 3 1318 5550 225 50 36 chr13 96173163 96174396 -24109916 - ORR1D1-int LTR MaLR -113 1257 1 3 1318 856 212 97 222 chr13 96174397 96174821 -24109491 - ORR1D1 LTR MaLR -1 373 3 3 1318 191 167 0 32 chr13 96175184 96175246 -24109066 + (CAGAGA)n Simple_repeat Simple_repeat 6 65 0 3 1318 2432 217 88 32 chr13 96175246 96175816 -24108496 + Lx6 LINE L1 6858 7459 -1 3 1318 261 240 19 0 chr13 96176262 96176325 -24107987 - ID4 SINE ID -88 64 1 3 1318 26 74 0 0 chr13 96176365 96176419 -24107893 + AT_rich Low_complexity Low_complexity 1 54 0 3 1318 335 282 129 34 chr13 96176454 96176601 -24107711 - RSINE1 SINE B4 -2 163 3 3 1318 340 81 0 63 chr13 96176889 96176968 -24107344 + (TTG)n Simple_repeat Simple_repeat 2 75 0 3 1318 373 265 16 57 chr13 96177808 96177932 -24106380 - PB1 SINE Alu 0 127 9 3 1318 198 278 89 40 chr13 96178270 96178371 -24105941 + L2c LINE L2 3282 3387 0 3 1318 686 192 45 23 chr13 96178377 96178510 -24105802 + B1_Mur2 SINE Alu 1 136 -13 3 1318 446 0 19 0 chr13 96178511 96178565 -24105747 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 3 1318 884 98 8 0 chr13 96178583 96178716 -24105596 + (GGGA)n Simple_repeat Simple_repeat 3 136 0 3 1318 481 241 19 0 chr13 96179537 96179645 -24104667 + ID_B1 SINE B4 99 208 -16 3 1318 230 269 20 70 chr13 96180526 96180626 -24103686 + MTEb LTR MaLR 285 379 0 3 1318 201 39 0 0 chr13 96181367 96181393 -24102919 + (ATG)n Simple_repeat Simple_repeat 1 26 0 3 1318 212 171 0 0 chr13 96181697 96181732 -24102580 + B4A SINE B4 2 36 -256 3 1318 518 299 47 29 chr13 96181757 96181875 -24102437 + B4A SINE B4 102 216 -76 3 1318 216 0 0 0 chr13 96181875 96181899 -24102413 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1318 518 299 47 29 chr13 96181899 96181952 -24102360 + B4A SINE B4 217 276 -16 3 1318 753 70 0 0 chr13 96181956 96182056 -24102256 + (CA)n Simple_repeat Simple_repeat 1 100 0 3 1318 807 201 0 0 chr13 96182056 96182230 -24102082 + GA-rich Low_complexity Low_complexity 1 174 0 3 1318 201 121 0 0 chr13 96182252 96182285 -24102027 + (TAGA)n Simple_repeat Simple_repeat 4 36 0 3 1318 399 179 13 13 chr13 96182646 96182725 -24101587 - ID2 SINE ID -2 81 3 3 1318 22 0 0 0 chr13 96182728 96182750 -24101562 + AT_rich Low_complexity Low_complexity 1 22 0 3 1318 237 159 0 0 chr13 96182756 96182800 -24101512 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1318 2124 165 11 0 chr13 96182830 96183187 -24101125 + MTC LTR MaLR 1 361 -60 3 1318 22 56 0 0 chr13 96183427 96183463 -24100849 + AT_rich Low_complexity Low_complexity 1 36 0 3 1318 1381 52 7 12 chr13 96183511 96184237 -24100075 + (TG)n Simple_repeat Simple_repeat 1 722 0 3 1318 3033 190 55 119 chr13 96184239 96185065 -24099247 + RMER1B Other Other 292 1064 -2 3 1318 2098 98 0 54 chr13 96185274 96185610 -24098702 + ORR1A3 LTR MaLR 1 318 -8 3 1318 408 143 0 28 chr13 96186543 96186615 -24097697 - B1_Mur1 SINE Alu -2 147 78 3 1318 277 288 97 15 chr13 96187950 96188084 -24096228 - MLT1C LTR MaLR -3 464 320 3 1318 567 0 0 0 chr13 96188530 96188593 -24095719 + (CA)n Simple_repeat Simple_repeat 2 64 0 3 1318 238 305 95 0 chr13 96189502 96189607 -24094705 + MER5A1 DNA MER1_type 52 166 0 3 1318 180 111 0 0 chr13 96189859 96189886 -24094426 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1318 1140 84 4 0 chr13 96189945 96190184 -24094128 + (CA)n Simple_repeat Simple_repeat 1 240 0 3 1318 244 318 22 11 chr13 96190188 96190277 -24094035 - Lx7 LINE L1 -388 7308 7219 3 1318 1696 246 72 3 chr13 96190338 96190729 -24093583 - Lx6 LINE L1 -173 7287 6870 3 1318 272 185 48 36 chr13 96190873 96190957 -24093355 + RMER5 LTR ERV1 33 117 -417 3 1318 822 156 96 37 chr13 96191692 96191879 -24092433 - B3A SINE B2 0 198 1 3 1318 1041 260 27 33 chr13 96191891 96192225 -24092087 + RMER5 LTR ERV1 196 527 -7 3 1318 629 237 0 15 chr13 96193188 96193321 -24090991 + B1_Mur1 SINE Alu 18 148 -1 3 1318 698 259 167 21 chr13 96193437 96193670 -24090642 + B4A SINE B4 14 280 -12 3 1318 278 106 0 21 chr13 96193684 96193732 -24090580 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1318 627 300 86 50 chr13 96194842 96195298 -24089014 - RMER5 LTR ERV1 -11 523 52 3 1318 1561 189 14 43 chr13 96196151 96196499 -24087813 + MTD LTR MaLR 3 340 -79 3 1318 464 338 1 14 chr13 96196581 96196790 -24087522 - MLT2D LTR ERVL -248 216 13 3 1318 1766 174 21 103 chr13 96197014 96197443 -24086869 - ORR1B1 LTR MaLR 0 394 1 3 1318 516 320 34 122 chr13 96197441 96197793 -24086519 + ORR1E LTR MaLR 4 324 -35 3 1318 2131 93 99 32 chr13 96198137 96198539 -24085773 + RMER21B LTR ERV1 414 842 0 3 1318 348 164 0 0 chr13 96198752 96198819 -24085493 + CT-rich Low_complexity Low_complexity 1 67 0 3 1318 295 378 77 16 chr13 96199768 96199951 -24084361 - MLT1J2 LTR MaLR -47 401 208 3 1318 263 188 219 24 chr13 96199969 96200051 -24084261 - MLT1J2 LTR MaLR -305 143 46 3 1318 454 261 72 0 chr13 96200227 96200338 -24083974 + B1_Mus2 SINE Alu 4 122 -25 3 1318 270 136 0 0 chr13 96200386 96200430 -24083882 + (TCTCCC)n Simple_repeat Simple_repeat 6 49 0 3 1318 422 193 103 68 chr13 96200430 96200517 -24083795 - RSINE1 SINE B4 -43 122 32 3 1318 3084 62 15 5 chr13 96200517 96200924 -24083388 + RLTR10A LTR ERVK 1 411 0 3 1318 422 193 103 68 chr13 96200924 96200953 -24083359 - RSINE1 SINE B4 -134 31 2 3 1318 24 0 0 0 chr13 96201523 96201547 -24082765 + AT_rich Low_complexity Low_complexity 1 24 0 3 1318 272 93 0 23 chr13 96202662 96202706 -24081606 - URR1B DNA MER1_type 0 225 183 3 1318 940 196 75 5 chr13 96202709 96202909 -24081403 - URR1B DNA MER1_type -11 214 1 3 1318 674 105 9 0 chr13 96203354 96203459 -24080853 + (TA)n Simple_repeat Simple_repeat 2 107 0 3 1318 345 24 0 0 chr13 96203459 96203501 -24080811 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1318 1024 116 0 26 chr13 96203523 96203674 -24080638 - B1_Mus1 SINE Alu 0 148 2 3 1318 414 132 0 0 chr13 96203678 96203728 -24080584 + (T)n Simple_repeat Simple_repeat 1 50 0 3 1318 1223 54 0 0 chr13 96203728 96203875 -24080437 - B1_Mus2 SINE Alu 0 147 1 3 1318 414 132 0 0 chr13 96203875 96203907 -24080405 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1318 427 235 61 0 chr13 96204693 96204791 -24079521 + PB1D10 SINE Alu 3 106 -11 3 1318 306 0 0 0 chr13 96204791 96204825 -24079487 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 3 1318 1169 75 0 0 chr13 96204873 96205020 -24079292 + B1_Mm SINE Alu 1 147 0 3 1318 324 120 0 0 chr13 96205020 96205070 -24079242 + (A)n Simple_repeat Simple_repeat 1 50 0 3 1318 1181 96 0 6 chr13 96205774 96205953 -24078359 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 3 1319 182 310 140 51 chr13 96208424 96208638 -24075674 + L2a LINE L2 3151 3383 -43 3 1319 286 269 12 72 chr13 96208687 96208702 -24075610 - B4 SINE B4 -129 163 122 3 1319 323 212 17 2 chr13 96208702 96208770 -24075542 - PB1D7 SINE Alu -81 68 1 3 1319 286 269 12 72 chr13 96208770 96208785 -24075527 - B4 SINE B4 -129 121 73 3 1319 674 192 7 0 chr13 96209337 96209488 -24074824 + (TA)n Simple_repeat Simple_repeat 2 153 0 3 1319 230 0 0 32 chr13 96209936 96209967 -24074345 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 1319 21 0 0 0 chr13 96210224 96210245 -24074067 + AT_rich Low_complexity Low_complexity 1 21 0 3 1319 289 274 27 0 chr13 96210283 96210356 -24073956 + Charlie12 DNA MER1_type 7 81 -2792 3 1319 979 139 7 0 chr13 96210857 96211001 -24073311 - B1_Mus2 SINE Alu -2 145 1 3 1319 286 232 0 68 chr13 96211375 96211449 -24072863 - ID4 SINE ID -10 73 5 3 1319 462 114 0 0 chr13 96212238 96212308 -24072004 + (TAA)n Simple_repeat Simple_repeat 2 71 0 3 1319 39 22 0 0 chr13 96212867 96212913 -24071399 + AT_rich Low_complexity Low_complexity 1 46 0 3 1319 252 0 0 0 chr13 96216068 96216096 -24068216 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 3 1319 218 190 33 33 chr13 96216336 96216396 -24067916 + C-rich Low_complexity Low_complexity 5 64 0 3 1319 228 263 0 0 chr13 96216496 96216553 -24067759 + B4A SINE B4 85 141 -151 3 1319 266 26 0 50 chr13 96216558 96216598 -24067714 + (GGGGA)n Simple_repeat Simple_repeat 4 41 0 3 1319 698 167 33 40 chr13 96217008 96217158 -24067154 + B1_Mur2 SINE Alu 1 149 0 3 1319 274 130 122 17 chr13 96217180 96217268 -24067044 - L1MB1 LINE L1 -272 5917 5814 3 1319 374 257 63 49 chr13 96217265 96217408 -24066904 - L1M3 LINE L1 -687 5481 5337 3 1319 353 235 9 81 chr13 96217408 96217519 -24066793 + MT2B LTR ERVL 156 258 -343 3 1319 711 225 0 0 chr13 96217432 96217561 -24066751 + B1_Mus2 SINE Alu 17 145 -2 3 1319 1203 257 90 83 chr13 96217597 96218001 -24066311 - L1M3 LINE L1 -844 5296 4892 3 1319 3071 130 48 4 chr13 96218001 96218479 -24065833 - RLTR19 LTR ERVK 0 499 1 3 1319 1203 257 90 83 chr13 96218479 96218740 -24065572 - L1M3 LINE L1 -1249 4891 4626 3 1319 234 81 0 0 chr13 96219019 96219056 -24065256 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 1319 1024 152 62 39 chr13 96219056 96219431 -24064881 - RMER6B LTR ERVK -15 446 1 3 1319 216 97 0 0 chr13 96221204 96221235 -24063077 + (CATATA)n Simple_repeat Simple_repeat 3 33 0 3 1319 414 0 0 0 chr13 96221950 96221996 -24062316 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1319 754 11 21 0 chr13 96222058 96222153 -24062159 + (TAGA)n Simple_repeat Simple_repeat 2 98 0 3 1319 810 241 222 29 chr13 96222207 96222792 -24061520 + L1MC3 LINE L1 6882 7598 -187 3 1319 324 199 0 0 chr13 96222815 96222908 -24061404 - L1_Mur3 LINE L1 -957 5183 5071 3 1319 233 342 34 17 chr13 96222901 96223020 -24061292 + Lx9 LINE L1 5856 5976 -1668 4 1319 1465 265 61 45 chr13 96223107 96223423 -24060889 + Lx8 LINE L1 6064 6388 -1085 4 1319 1437 169 162 95 chr13 96223423 96223855 -24060457 + RMER6B LTR ERVK 1 461 0 4 1319 1465 265 61 45 chr13 96223855 96224032 -24060280 + Lx8 LINE L1 6389 6565 -908 4 1319 1234 272 61 6 chr13 96224174 96224518 -24059794 + Lx8 LINE L1 6520 6882 -591 4 1319 259 347 18 131 chr13 96224623 96224852 -24059460 - RMER4A LTR ERVK -248 218 16 4 1319 1290 255 98 124 chr13 96224908 96225513 -24058799 + Lx8 LINE L1 6883 7471 -2 4 1319 606 174 53 35 chr13 96225544 96225657 -24058655 + RSINE1 SINE B4 3 117 -48 4 1319 901 316 64 53 chr13 96227063 96227424 -24056888 - MLT1A0 LTR MaLR 0 365 1 4 1319 1951 180 11 109 chr13 96227494 96227961 -24056351 - MTC LTR MaLR 0 421 1 4 1319 837 185 0 0 chr13 96228050 96228185 -24056127 + B1_Mur2 SINE Alu 2 136 -13 4 1319 223 139 69 0 chr13 96228188 96228260 -24056052 + (TA)n Simple_repeat Simple_repeat 1 77 0 4 1319 237 257 70 14 chr13 96228273 96228344 -24055968 - MER5A1 DNA MER1_type -30 136 62 4 1319 420 221 126 0 chr13 96228624 96228751 -24055561 + L1MB4 LINE L1 6037 6179 -1 4 1319 2107 301 49 33 chr13 96228859 96229703 -24054609 + Lx8 LINE L1 6567 7423 -50 4 1319 1013 97 156 0 chr13 96229867 96230021 -24054291 + B2_Mm1t SINE B2 2 179 -14 4 1319 323 111 431 36 chr13 96230095 96230197 -24054115 + B2_Mm2 SINE B2 47 188 -7 4 1319 510 203 8 78 chr13 96230424 96230448 -24053864 - PB1D9 SINE Alu -1 119 100 4 1319 843 10 0 0 chr13 96230448 96230544 -24053768 + (TC)n Simple_repeat Simple_repeat 1 96 0 4 1319 510 203 8 78 chr13 96230544 96230647 -24053665 - PB1D9 SINE Alu -21 99 1 4 1319 848 42 84 12 chr13 96231041 96231208 -24053104 + (GGGAA)n Simple_repeat Simple_repeat 2 180 0 4 1319 351 325 78 23 chr13 96231213 96231455 -24052857 + HAL1-3A_ME LINE L1 2284 2439 -419 4 1319 207 162 0 0 chr13 96231455 96231492 -24052820 + GA-rich Low_complexity Low_complexity 1 37 0 4 1319 575 180 9 35 chr13 96231919 96232034 -24052278 - PB1D7 SINE Alu 0 120 9 4 1319 292 267 18 28 chr13 96232437 96232521 -24051791 + PB1D10 SINE Alu 25 111 -39 4 1319 975 86 17 33 chr13 96232521 96232702 -24051610 + (GGGA)n Simple_repeat Simple_repeat 2 179 0 4 1319 235 327 44 26 chr13 96232702 96232736 -24051576 + B1_Mur4 SINE Alu 112 144 -6 4 1319 261 0 0 0 chr13 96233111 96233140 -24051172 + (TG)n Simple_repeat Simple_repeat 1 29 0 4 1319 640 234 45 67 chr13 96233206 96233385 -24050927 + MLT1A LTR MaLR 200 374 0 4 1319 3460 50 43 7 chr13 96233606 96234052 -24050260 + L1Md_F2 LINE L1 6109 6570 -12 4 1319 346 284 11 11 chr13 96234243 96234332 -24049980 + BC1_Mm scRNA scRNA 1 89 -63 4 1319 450 272 60 125 chr13 96235460 96235741 -24048571 - MER31B LTR ERV1 -9 457 195 4 1319 1281 132 93 0 chr13 96235851 96236056 -24048256 - URR1B DNA MER1_type 0 225 2 4 1319 1728 134 103 10 chr13 96236363 96236665 -24047647 + MTB LTR MaLR 1 330 -70 4 1319 850 58 0 0 chr13 96236773 96236876 -24047436 + MTB LTR MaLR 298 400 0 4 1319 4432 114 28 19 chr13 96237046 96237718 -24046594 + RLTR33 LTR ERVK 1 678 0 4 1319 371 337 18 36 chr13 96237915 96238090 -24046222 + MIRb SINE MIR 50 215 -47 4 1319 1148 206 62 17 chr13 96239294 96239556 -24044756 - MTC LTR MaLR -171 250 1 4 1319 986 97 19 31 chr13 96239561 96240033 -24044279 + (TG)n Simple_repeat Simple_repeat 1 465 0 4 1319 338 180 0 0 chr13 96240692 96240753 -24043559 - B1_Mur1 SINE Alu -5 144 84 4 1319 657 217 0 0 chr13 96240750 96240865 -24043447 + B1_Mur4 SINE Alu 35 149 -1 4 1319 616 181 78 21 chr13 96240892 96241033 -24043279 + B1_Mur1 SINE Alu 1 149 0 4 1319 781 199 68 117 chr13 96241045 96241210 -24043102 + B3A SINE B2 1 170 -28 4 1319 450 0 0 0 chr13 96241210 96241260 -24043052 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1319 261 0 0 0 chr13 96241260 96241288 -24043024 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1319 538 199 68 117 chr13 96241288 96241326 -24042986 + B2_Mm2 SINE B2 164 194 -1 4 1319 784 291 30 8 chr13 96241328 96241591 -24042721 + L1MC1 LINE L1 5672 5940 -393 4 1319 403 224 35 12 chr13 96241663 96241749 -24042563 - B1F1 SINE Alu -52 97 10 4 1319 786 194 27 44 chr13 96242134 96242197 -24042115 - B2_Mm2 SINE B2 -2 193 134 4 1319 2378 105 6 0 chr13 96242197 96242522 -24041790 - ORR1A2 LTR MaLR 0 327 1 4 1319 786 194 27 44 chr13 96242522 96242641 -24041671 - B2_Mm2 SINE B2 -62 133 15 4 1319 691 277 24 0 chr13 96242761 96242927 -24041385 + B3 SINE B2 5 174 -42 4 1319 195 129 0 0 chr13 96242927 96242958 -24041354 + (TC)n Simple_repeat Simple_repeat 1 31 0 4 1319 653 300 100 34 chr13 96243176 96243445 -24040867 - B4 SINE B4 -5 287 1 4 1319 609 83 0 0 chr13 96243449 96243533 -24040779 + (TG)n Simple_repeat Simple_repeat 1 84 0 4 1319 292 274 56 9 chr13 96243540 96243647 -24040665 - L1MD LINE L1 -3138 3008 2897 4 1319 417 233 50 43 chr13 96243820 96243958 -24040354 + RSINE1 SINE B4 25 163 -2 4 1319 791 208 80 11 chr13 96244465 96244640 -24039672 - B3A SINE B2 -10 188 2 4 1319 224 228 35 0 chr13 96244746 96244803 -24039509 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 4 1319 297 217 0 0 chr13 96244841 96244901 -24039411 - B1F SINE Alu -89 60 1 4 1319 277 279 13 0 chr13 96246222 96246301 -24038011 + L2 LINE L2 2087 2166 -1253 4 1319 1069 86 22 0 chr13 96246424 96246563 -24037749 + B1_Mus1 SINE Alu 1 142 -6 4 1319 977 132 0 6 chr13 96246566 96246734 -24037578 + (GAA)n Simple_repeat Simple_repeat 2 168 0 4 1319 192 330 87 11 chr13 96247794 96247886 -24036426 + MIRc SINE MIR 66 164 -104 4 1319 383 268 26 18 chr13 96247931 96248045 -24036267 + MER53 DNA hAT 1 115 -78 4 1319 216 0 0 0 chr13 96248169 96248193 -24036119 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1319 297 0 0 0 chr13 96248912 96248945 -24035367 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 4 1319 452 252 57 0 chr13 96249466 96249589 -24034723 + B1F SINE Alu 1 130 -19 4 1319 225 94 0 0 chr13 96249621 96249653 -24034659 + (GA)n Simple_repeat Simple_repeat 1 32 0 4 1319 183 346 88 72 chr13 96250565 96250814 -24033498 + L2b LINE L2 3099 3351 -24 4 1319 485 248 73 16 chr13 96250838 96250961 -24033351 + B1F SINE Alu 12 141 -8 4 1319 386 130 55 9 chr13 96251012 96251121 -24033191 + GA-rich Low_complexity Low_complexity 1 114 0 4 1319 418 103 0 0 chr13 96251683 96251741 -24032571 - L1Md_F2 LINE L1 -485 6099 6042 4 1319 3941 48 0 10 chr13 96251741 96252227 -24032085 + L1Md_F2 LINE L1 6102 6582 0 4 1319 740 165 78 52 chr13 96252544 96252736 -24031576 - B3 SINE B2 -5 211 15 4 1319 244 234 39 13 chr13 96252670 96252748 -24031564 - B4A SINE B4 -210 82 3 4 1319 320 239 106 94 chr13 96252803 96252983 -24031329 + B3A SINE B2 1 182 -16 4 1319 466 168 18 0 chr13 96252983 96253096 -24031216 + (CA)n Simple_repeat Simple_repeat 1 115 0 4 1319 214 286 130 28 chr13 96253115 96253223 -24031089 + L3b LINE CR1 76 194 -288 4 1319 846 196 108 5 chr13 96253345 96253540 -24030772 + B3 SINE B2 2 216 0 4 1319 254 271 29 0 chr13 96253900 96253970 -24030342 + MLT1F LTR MaLR 2 73 -475 4 1319 386 266 43 17 chr13 96254083 96254198 -24030114 + B4 SINE B4 5 122 -170 4 1319 287 280 160 16 chr13 96254914 96255054 -24029258 + MLT1F LTR MaLR 169 364 -215 4 1319 1356 94 0 6 chr13 96255090 96255271 -24029041 + B2_Mm2 SINE B2 1 180 -15 4 1319 510 17 0 0 chr13 96255273 96255332 -24028980 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1319 834 174 35 0 chr13 96255620 96255764 -24028548 - B1_Mur3 SINE Alu 0 149 1 4 1319 945 240 34 5 chr13 96255823 96256028 -24028284 - B3 SINE B2 -5 211 1 4 1319 864 200 0 0 chr13 96256314 96256494 -24027818 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1319 864 191 0 0 chr13 96256505 96256678 -24027634 + (CA)n Simple_repeat Simple_repeat 2 174 0 4 1319 303 95 0 23 chr13 96256682 96256725 -24027587 + HAL1-3A_ME LINE L1 1975 2016 -842 4 1319 503 292 35 0 chr13 96257656 96257800 -24026512 - B1F SINE Alu 0 149 1 4 1319 528 280 42 0 chr13 96257878 96258021 -24026291 + B1F SINE Alu 1 149 0 4 1319 591 269 22 0 chr13 96258035 96258169 -24026143 + B1_Mur1 SINE Alu 12 148 -1 4 1319 580 145 27 49 chr13 96258533 96258759 -24025553 + GA-rich Low_complexity Low_complexity 1 220 0 4 1319 568 309 0 0 chr13 96259273 96259399 -24024913 + RSINE1 SINE B4 34 159 -6 4 1319 480 321 56 25 chr13 96259429 96259627 -24024685 + B3 SINE B2 1 204 -12 4 1319 531 149 162 53 chr13 96259657 96259792 -24024520 + B1_Mur4 SINE Alu 1 150 0 4 1319 850 221 70 45 chr13 96260687 96260886 -24023426 - B3 SINE B2 -7 209 6 4 1319 866 182 134 60 chr13 96260925 96261223 -24023089 - Lx7 LINE L1 -3 7693 7374 4 1319 305 167 37 37 chr13 96261210 96261291 -24023021 + Lx7 LINE L1 7294 7374 -322 4 1319 306 310 78 48 chr13 96261827 96261993 -24022319 + L1MEg LINE L1 912 1082 -5002 4 1319 218 255 0 0 chr13 96262040 96262087 -24022225 + (TGG)n Simple_repeat Simple_repeat 3 49 0 4 1319 852 106 57 0 chr13 96262087 96262210 -24022102 + B1_Mus1 SINE Alu 6 135 -13 4 1319 230 81 27 0 chr13 96262210 96262247 -24022065 + (TGGGGG)n Simple_repeat Simple_repeat 4 41 0 4 1319 819 255 11 16 chr13 96262268 96262455 -24021857 + B3 SINE B2 31 216 0 4 1319 761 263 66 11 chr13 96262464 96262645 -24021667 - B3A SINE B2 0 198 8 4 1319 224 91 23 0 chr13 96263785 96263829 -24020483 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 4 1319 183 129 0 0 chr13 96264067 96264098 -24020214 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1319 261 319 21 21 chr13 96264135 96264228 -24020084 + PB1D10 SINE Alu 12 104 -13 4 1319 241 207 32 84 chr13 96264519 96264614 -24019698 + L1MC5 LINE L1 7398 7487 -474 4 1319 6569 206 121 45 chr13 96265065 96268015 -24016297 + RLTR14-int LTR ERV1 2142 5316 -1 4 1319 1780 127 147 29 chr13 96268036 96268376 -24015936 + RLTR14 LTR ERV1 3 382 0 4 1319 1492 72 0 20 chr13 96268779 96268964 -24015348 + B2_Mm2 SINE B2 1 183 -12 4 1319 261 0 0 0 chr13 96268964 96268993 -24015319 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 5 1319 1492 72 0 20 chr13 96268993 96269005 -24015307 + B2_Mm2 SINE B2 184 194 -1 4 1319 923 159 0 6 chr13 96269005 96269176 -24015136 + GA-rich Low_complexity Low_complexity 2 171 0 5 1319 825 243 24 24 chr13 96269423 96269634 -24014678 + B3 SINE B2 1 211 -5 5 1319 573 232 173 22 chr13 96270129 96270314 -24013998 + B3 SINE B2 2 214 -2 5 1319 774 150 60 0 chr13 96270528 96270661 -24013651 + B1_Mur4 SINE Alu 1 141 -9 5 1319 318 80 0 0 chr13 96270665 96270715 -24013597 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1319 306 0 0 0 chr13 96270715 96270748 -24013564 + (GA)n Simple_repeat Simple_repeat 2 35 0 5 1319 254 186 93 67 chr13 96270956 96271031 -24013281 + MLT1A0 LTR MaLR 226 302 -63 5 1319 1897 141 16 7 chr13 96271031 96271338 -24012974 + Lx5 LINE L1 6741 7050 0 5 1319 1358 252 32 15 chr13 96272431 96272773 -24011539 + ORR1C2 LTR MaLR 1 348 -11 5 1319 324 262 79 46 chr13 96272833 96272985 -24011327 + L2a LINE L2 3231 3387 -39 5 1319 242 263 0 29 chr13 96272985 96273122 -24011190 + ORR1C2-int LTR MaLR 622 754 -755 5 1319 1006 136 0 0 chr13 96273019 96273159 -24011153 + B1_Mus1 SINE Alu 6 145 -3 5 1319 453 62 0 0 chr13 96273259 96273324 -24010988 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1319 1049 310 91 82 chr13 96273414 96273951 -24010361 + MLT1F LTR MaLR 7 548 0 5 1319 264 68 0 63 chr13 96274071 96274134 -24010178 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 5 1319 1175 81 0 0 chr13 96274139 96274287 -24010025 - B1_Mus1 SINE Alu 0 148 1 5 1319 209 33 33 0 chr13 96274349 96274379 -24009933 + (TCCC)n Simple_repeat Simple_repeat 2 32 0 5 1319 4291 184 28 24 chr13 96274380 96275395 -24008917 - Lx4B LINE L1 -15 6985 5940 5 1319 1693 167 77 30 chr13 96275457 96275821 -24008491 + ORR1C2 LTR MaLR 4 384 0 5 1319 726 242 0 20 chr13 96275826 96275978 -24008334 + B1F SINE Alu 1 149 0 5 1319 589 225 33 0 chr13 96275996 96276116 -24008196 + B1F2 SINE Alu 24 147 -2 5 1319 715 240 75 15 chr13 96276234 96276433 -24007879 - B3 SINE B2 -5 211 1 5 1319 597 193 35 0 chr13 96276467 96276581 -24007731 - PB1D9 SINE Alu -2 118 1 5 1319 416 219 204 35 chr13 96276581 96276609 -24007703 - ID_B1 SINE B4 -2 222 57 5 1319 1449 43 0 0 chr13 96276716 96277134 -24007178 + (TG)n Simple_repeat Simple_repeat 1 418 0 5 1319 420 320 31 56 chr13 96277147 96277309 -24007003 - B3 SINE B2 -56 160 3 5 1319 273 256 0 0 chr13 96277796 96277878 -24006434 + (CATA)n Simple_repeat Simple_repeat 3 84 0 5 1319 315 301 98 58 chr13 96278373 96278408 -24005904 + B4 SINE B4 50 180 -112 5 1319 574 182 19 59 chr13 96278408 96278535 -24005777 + B1_Mur4 SINE Alu 2 120 0 5 1319 315 301 98 58 chr13 96278535 96278546 -24005766 + B4 SINE B4 181 229 -63 5 1319 718 251 92 5 chr13 96278759 96278955 -24005357 - B3 SINE B2 -1 215 3 5 1319 885 151 14 0 chr13 96278959 96279098 -24005214 - B1_Mur1 SINE Alu -7 142 2 5 1319 930 187 35 18 chr13 96279109 96279302 -24005010 - B2_Mm2 SINE B2 0 216 2 5 1319 455 295 211 19 chr13 96279488 96279968 -24004344 - Tigger7 DNA MER2_type -10 2481 2262 5 1319 1576 42 5 11 chr13 96280342 96280533 -24003779 + B2_Mm1a SINE B2 2 191 -2 5 1319 272 111 0 18 chr13 96280566 96280621 -24003691 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1319 420 20 0 0 chr13 96280621 96280669 -24003643 + (GA)n Simple_repeat Simple_repeat 1 49 0 5 1319 550 258 5 133 chr13 96280673 96280861 -24003451 - B3 SINE B2 -52 164 1 5 1319 629 176 70 49 chr13 96280931 96281074 -24003238 + B1_Mur2 SINE Alu 3 148 -1 5 1319 453 19 0 0 chr13 96281394 96281448 -24002864 + (TG)n Simple_repeat Simple_repeat 1 54 0 5 1319 456 19 0 0 chr13 96281464 96281517 -24002795 + (GGAA)n Simple_repeat Simple_repeat 2 54 0 5 1319 273 57 0 0 chr13 96282425 96282460 -24001852 + (CCCCCA)n Simple_repeat Simple_repeat 1 35 0 5 1319 378 115 0 0 chr13 96283019 96283080 -24001232 + (CA)n Simple_repeat Simple_repeat 1 61 0 5 1319 180 0 0 0 chr13 96283080 96283100 -24001212 + (CAT)n Simple_repeat Simple_repeat 1 20 0 5 1319 267 300 29 0 chr13 96284397 96284467 -23999845 - ID4_ SINE ID -11 72 1 5 1319 629 25 13 0 chr13 96284637 96284716 -23999596 + (TAGA)n Simple_repeat Simple_repeat 2 81 0 5 1319 421 288 48 48 chr13 96285111 96285235 -23999077 + PB1 SINE Alu 3 126 -1 5 1319 250 278 248 13 chr13 96285632 96285785 -23998527 + MLT1D LTR MaLR 28 216 -289 5 1319 949 122 107 28 chr13 96286086 96286263 -23998049 + B2_Mm2 SINE B2 2 192 -3 5 1319 945 148 26 57 chr13 96286272 96286466 -23997846 + B2_Mm2 SINE B2 2 189 -6 5 1319 552 269 22 0 chr13 96286466 96286599 -23997713 + B1_Mur1 SINE Alu 1 137 -12 5 1319 23 33 0 0 chr13 96286602 96286632 -23997680 + AT_rich Low_complexity Low_complexity 1 30 0 5 1319 549 209 348 6 chr13 96286637 96286801 -23997511 + ID_B1 SINE B4 1 220 -4 5 1319 297 298 29 53 chr13 96287282 96287458 -23996854 - MIR SINE MIR -27 241 66 5 1319 1128 253 101 40 chr13 96287829 96288175 -23996137 - ORR1D2 LTR MaLR 0 370 4 5 1319 414 307 58 14 chr13 96288396 96288535 -23995777 + RSINE1 SINE B4 1 145 -20 5 1319 240 35 0 0 chr13 96288540 96288569 -23995743 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1319 1119 50 0 0 chr13 96288687 96288827 -23995485 + B1_Mm SINE Alu 6 145 -2 5 1319 451 245 25 93 chr13 96289041 96289203 -23995109 - MTEb LTR MaLR -143 236 86 5 1319 702 144 44 22 chr13 96289200 96289328 -23994984 + B1_Mus1 SINE Alu 11 142 -6 5 1319 276 53 0 0 chr13 96289328 96289366 -23994946 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 5 1319 439 256 22 0 chr13 96289381 96289471 -23994841 - MTEb LTR MaLR -282 97 6 5 1319 541 267 28 11 chr13 96289476 96289658 -23994654 + L1ME2 LINE L1 5649 5833 -331 5 1319 324 328 94 8 chr13 96289658 96289775 -23994537 + PB1 SINE Alu 1 127 0 5 1319 350 224 124 114 chr13 96289775 96289977 -23994335 + ID_B1 SINE B4 3 206 -18 5 1319 814 240 86 86 chr13 96290082 96290442 -23993870 + L1MB8 LINE L1 5817 6176 -2 5 1319 425 312 22 60 chr13 96290696 96290880 -23993432 + ID_B1 SINE B4 3 179 -45 5 1319 374 269 11 0 chr13 96290805 96290898 -23993414 + PB1D10 SINE Alu 23 116 -1 5 1319 288 254 28 14 chr13 96291441 96291513 -23992799 + ID4_ SINE ID 2 74 -9 5 1319 489 84 0 0 chr13 96291526 96291597 -23992715 + (TG)n Simple_repeat Simple_repeat 1 71 0 5 1319 348 311 44 7 chr13 96292399 96292535 -23991777 + B1F SINE Alu 1 141 -8 5 1319 288 254 28 14 chr13 96292550 96292622 -23991690 + ID4_ SINE ID 2 74 -9 5 1319 201 154 0 0 chr13 96292635 96292674 -23991638 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1319 398 274 95 62 chr13 96292748 96292927 -23991385 + L1ME2 LINE L1 5940 6124 0 5 1319 335 172 35 0 chr13 96292962 96293020 -23991292 + B3 SINE B2 71 130 -86 5 1319 518 293 50 7 chr13 96293090 96293231 -23991081 + B1_Mur2 SINE Alu 3 149 0 5 1319 295 289 36 0 chr13 96293304 96293387 -23990925 + ID SINE ID 3 88 -136 5 1319 338 296 18 18 chr13 96295648 96295758 -23988554 - PB1D7 SINE Alu -1 119 10 5 1319 202 313 90 41 chr13 96295892 96296028 -23988284 - MIRb SINE MIR -115 153 12 5 1319 232 241 0 17 chr13 96296088 96296147 -23988165 + BC1_Mm scRNA scRNA 2 59 -93 5 1319 305 242 15 0 chr13 96296094 96296160 -23988152 + tRNA-Ala-GCY_ tRNA tRNA 1 67 -8 5 1319 303 250 15 0 chr13 96296161 96296229 -23988083 + PB1D10 SINE Alu 42 110 -7 5 1319 791 174 0 0 chr13 96297259 96297391 -23986921 + B1_Mus1 SINE Alu 2 133 -15 5 1319 346 253 0 0 chr13 96298152 96298227 -23986085 + ID4 SINE ID 2 76 -7 5 1319 638 140 50 0 chr13 96298270 96298370 -23985942 - B1_Mur4 SINE Alu -8 142 38 5 1319 1587 52 0 5 chr13 96298646 96298838 -23985474 + B2_Mm1a SINE B2 2 192 -1 5 1319 194 349 142 80 chr13 96299148 96299297 -23985015 + L2 LINE L2 2238 2394 -1025 5 1319 838 174 22 39 chr13 96299297 96299476 -23984836 + B2_Mm2 SINE B2 1 176 -19 5 1319 194 349 142 80 chr13 96299476 96300086 -23984226 + L2 LINE L2 2395 3044 -375 5 1319 22 0 0 0 chr13 96300430 96300452 -23983860 + AT_rich Low_complexity Low_complexity 1 22 0 5 1319 1205 34 0 13 chr13 96300452 96300590 -23983722 + B1_Mus1 SINE Alu 2 138 -10 5 1319 207 0 0 0 chr13 96300590 96300613 -23983699 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1319 1017 136 169 0 chr13 96300633 96300817 -23983495 - B3 SINE B2 0 216 2 5 1319 709 242 12 18 chr13 96300920 96301084 -23983228 - RSINE1 SINE B4 0 165 3 5 1319 279 337 40 10 chr13 96302786 96302806 -23981506 + B4 SINE B4 68 90 -202 5 1319 500 255 27 18 chr13 96302806 96302918 -23981394 + PB1D9 SINE Alu 3 115 -5 5 1319 1246 161 40 43 chr13 96302960 96303285 -23981027 - RMER17C LTR ERVK 0 410 87 5 1319 1059 66 73 0 chr13 96303286 96303423 -23980889 + B1_Mm SINE Alu 1 147 0 5 1319 925 9 18 0 chr13 96303423 96303537 -23980775 + (GA)n Simple_repeat Simple_repeat 2 117 0 5 1319 389 167 421 85 chr13 96303537 96303712 -23980600 - RLTR41 LTR ERV1 -212 234 1 5 1319 320 111 19 0 chr13 96303716 96303770 -23980542 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 1319 191 361 8 76 chr13 96303871 96304003 -23980309 + MIRb SINE MIR 21 143 -125 5 1319 195 42 0 0 chr13 96305978 96306002 -23978310 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1319 191 114 29 0 chr13 96306541 96306576 -23977736 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1319 210 354 24 0 chr13 96306780 96306862 -23977450 + MIR SINE MIR 151 234 -28 5 1319 1966 140 26 90 chr13 96306879 96307303 -23977009 - RMER10B LTR ERVL 0 398 2 5 1319 859 258 18 0 chr13 96307441 96307658 -23976654 - ID_B1 SINE B4 -2 222 2 6 1319 1087 232 159 22 chr13 96307812 96308214 -23976098 - RLTR12B LTR ERVK -25 503 47 6 1319 1170 117 0 0 chr13 96308816 96308995 -23975317 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 6 1319 216 286 0 0 chr13 96309335 96309384 -23974928 - B1F SINE Alu -88 61 13 6 1319 254 338 0 0 chr13 96309820 96309888 -23974424 + L2b LINE L2 2673 2740 -679 6 1319 717 12 0 0 chr13 96309889 96309971 -23974341 + (TTCC)n Simple_repeat Simple_repeat 2 83 0 6 1319 371 282 99 20 chr13 96309983 96310135 -23974177 - B3A SINE B2 -4 194 31 6 1319 310 269 44 0 chr13 96310151 96310237 -23974075 - PB1D10 SINE Alu -19 98 2 6 1319 227 312 99 46 chr13 96310287 96310418 -23973894 + L2b LINE L2 3236 3373 -2 6 1319 207 245 10 21 chr13 96310564 96310660 -23973652 + (CA)n Simple_repeat Simple_repeat 2 96 0 6 1319 219 69 0 0 chr13 96310768 96310797 -23973515 + (TCC)n Simple_repeat Simple_repeat 3 31 0 6 1319 1358 86 48 0 chr13 96310797 96310983 -23973329 - B2_Mm2 SINE B2 0 195 1 6 1319 362 339 66 36 chr13 96311075 96311288 -23973024 + MIRb SINE MIR 2 214 -54 6 1319 205 239 0 42 chr13 96311845 96311893 -23972419 + MIRb SINE MIR 151 196 -72 6 1319 1178 215 186 21 chr13 96312109 96312454 -23971858 + MTD LTR MaLR 3 405 -14 6 1319 527 85 0 12 chr13 96312931 96313014 -23971298 - B2_Mm1t SINE B2 0 193 112 6 1319 228 0 0 0 chr13 96313012 96313041 -23971271 - B3A SINE B2 -168 30 2 6 1319 522 46 0 0 chr13 96313498 96313563 -23970749 + (TA)n Simple_repeat Simple_repeat 2 66 0 6 1319 196 365 99 38 chr13 96313698 96313829 -23970483 - L2b LINE L2 -18 3357 3219 6 1319 668 296 84 51 chr13 96313903 96314238 -23970074 + ORR1E LTR MaLR 9 354 -5 6 1319 1925 162 21 9 chr13 96314265 96314595 -23969717 - RMER4A LTR ERVK -110 356 23 6 1319 1380 75 43 0 chr13 96314595 96314782 -23969530 + B2_Mm2 SINE B2 1 195 0 6 1319 422 122 27 0 chr13 96314783 96314857 -23969455 + (GAAA)n Simple_repeat Simple_repeat 4 79 0 6 1319 211 264 22 33 chr13 96315124 96315214 -23969098 + GA-rich Low_complexity Low_complexity 3 91 0 6 1319 444 318 57 31 chr13 96315226 96315385 -23968927 + RSINE1 SINE B4 3 165 0 6 1319 226 291 16 0 chr13 96315394 96315521 -23968791 + (CATA)n Simple_repeat Simple_repeat 3 131 0 6 1319 335 188 100 40 chr13 96315590 96315690 -23968622 - PB1D7 SINE Alu -3 117 12 6 1319 314 276 111 10 chr13 96317831 96317930 -23966382 - PB1D10 SINE Alu 0 117 9 6 1319 860 146 43 14 chr13 96317946 96318085 -23966227 - B1_Mur2 SINE Alu 0 149 7 6 1319 738 0 0 0 chr13 96318762 96318844 -23965468 + (TC)n Simple_repeat Simple_repeat 1 82 0 6 1319 578 75 56 9 chr13 96319184 96319292 -23965020 + (TTTTC)n Simple_repeat Simple_repeat 3 115 0 6 1319 510 134 339 0 chr13 96319904 96320016 -23964296 - B1_Mur4 SINE Alu 0 150 1 6 1319 322 185 0 44 chr13 96320123 96320191 -23964121 - MLT1C LTR MaLR 0 467 403 6 1319 234 0 0 0 chr13 96320342 96320368 -23963944 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 6 1319 543 230 0 18 chr13 96320499 96320667 -23963645 + CT-rich Low_complexity Low_complexity 4 168 0 6 1319 320 357 70 70 chr13 96320827 96320887 -23963425 - MLT1C LTR MaLR -219 286 221 6 1319 1432 73 10 20 chr13 96320887 96321083 -23963229 - B2_Mm2 SINE B2 0 195 2 6 1319 320 357 70 70 chr13 96321083 96321308 -23963004 - MLT1C LTR MaLR -285 220 1 6 1319 1907 149 58 61 chr13 96321373 96321752 -23962560 - ORR1C1 LTR MaLR 0 378 1 6 1319 262 232 10 21 chr13 96322247 96322344 -23961968 + (CATA)n Simple_repeat Simple_repeat 1 96 0 6 1319 489 254 0 0 chr13 96322354 96322527 -23961785 + (CA)n Simple_repeat Simple_repeat 1 173 0 6 1319 480 254 0 0 chr13 96322594 96322771 -23961541 + (CA)n Simple_repeat Simple_repeat 2 178 0 6 1319 372 234 0 0 chr13 96322896 96322912 -23961400 - ID2 SINE ID -70 82 7 6 1319 424 117 0 0 chr13 96322912 96322972 -23961340 - tRNA-Ala-GCY_ tRNA tRNA -15 60 1 6 1319 662 129 137 8 chr13 96323074 96323191 -23961121 - B1_Mur4 SINE Alu 0 150 19 6 1319 844 218 60 15 chr13 96323233 96323433 -23960879 - B3 SINE B2 -7 209 1 6 1319 1408 276 112 17 chr13 96324522 96324994 -23959318 - MT2A LTR ERVL -16 517 1 6 1319 201 182 0 0 chr13 96325125 96325158 -23959154 + T-rich Low_complexity Low_complexity 3 35 0 6 1319 968 144 9 113 chr13 96325243 96325411 -23958901 - B2_Mm2 SINE B2 -4 191 35 6 1319 189 0 0 0 chr13 96325411 96325432 -23958880 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 6 1319 1180 42 0 20 chr13 96325432 96325578 -23958734 - B1_Mus2 SINE Alu -3 144 2 6 1319 968 144 9 113 chr13 96325578 96325620 -23958692 - B2_Mm2 SINE B2 -161 34 3 6 1319 848 290 0 9 chr13 96325807 96326023 -23958289 - B3 SINE B2 -2 214 1 6 1319 877 195 33 38 chr13 96326085 96326298 -23958014 + B3 SINE B2 3 214 -2 6 1319 387 0 0 0 chr13 96326428 96326471 -23957841 + (CA)n Simple_repeat Simple_repeat 1 43 0 6 1319 1876 171 104 42 chr13 96326621 96327005 -23957307 + MTD LTR MaLR 12 419 0 6 1319 253 250 120 43 chr13 96327864 96327956 -23956356 - B4 SINE B4 -8 284 186 6 1319 339 132 0 0 chr13 96328356 96328424 -23955888 + (GA)n Simple_repeat Simple_repeat 1 68 0 6 1319 543 101 0 0 chr13 96329460 96329539 -23954773 + (TG)n Simple_repeat Simple_repeat 2 80 0 6 1319 617 176 101 0 chr13 96329540 96329659 -23954653 - B1F2 SINE Alu -10 139 9 6 1319 275 273 138 69 chr13 96329564 96329694 -23954618 - B4 SINE B4 -88 204 66 6 1319 263 250 0 0 chr13 96329655 96329703 -23954609 + MTE2b LTR MaLR 115 162 -217 6 1319 645 177 245 0 chr13 96329709 96329856 -23954456 - MT2A LTR ERVL -4 529 347 6 1319 315 132 15 15 chr13 96329842 96329914 -23954398 - MT2A LTR ERVL -501 83 12 6 1319 450 278 30 8 chr13 96329930 96330064 -23954248 + MTE2b LTR MaLR 169 305 -74 6 1319 1361 33 30 26 chr13 96330089 96330591 -23953721 + (TCTA)n Simple_repeat Simple_repeat 1 503 0 6 1319 220 250 105 23 chr13 96330617 96330703 -23953609 - B1F1 SINE Alu -56 93 1 6 1319 264 286 25 25 chr13 96331108 96331187 -23953125 - ID4_ SINE ID -1 82 4 6 1319 603 199 91 57 chr13 96331226 96331402 -23952910 - B3A SINE B2 -16 182 1 6 1319 369 0 0 0 chr13 96331949 96331990 -23952322 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1319 854 66 0 0 chr13 96332018 96332124 -23952188 - B2_Mm2 SINE B2 -70 125 20 6 1319 1298 269 98 50 chr13 96332319 96333044 -23951268 + RMER13A LTR ERVK 22 826 -34 6 1319 326 299 8 100 chr13 96334747 96334877 -23949435 - PB1D7 SINE Alu -2 118 1 6 1319 203 178 13 64 chr13 96334887 96334965 -23949347 + A-rich Low_complexity Low_complexity 3 76 0 6 1319 473 249 156 78 chr13 96335181 96335373 -23948939 + B3 SINE B2 10 216 0 6 1319 245 250 19 0 chr13 96335732 96335784 -23948528 - B1F SINE Alu -92 57 5 6 1319 180 0 0 0 chr13 96335798 96335818 -23948494 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 6 1319 286 242 30 0 chr13 96336057 96336123 -23948189 - PB1 SINE Alu 0 127 60 6 1319 245 250 19 0 chr13 96336146 96336198 -23948114 + B1F SINE Alu 5 57 -92 6 1319 2453 179 51 20 chr13 96336270 96336737 -23947575 + RLTR28 LTR ERVL 19 507 -17 6 1319 1966 107 6 151 chr13 96336737 96337101 -23947211 + RLTR10E LTR ERVK 1 311 0 6 1319 2453 179 51 20 chr13 96337101 96337124 -23947188 + RLTR28 LTR ERVL 508 524 0 6 1319 226 301 39 31 chr13 96337566 96337693 -23946619 - BC1_Mm scRNA scRNA -23 129 2 6 1319 441 221 83 58 chr13 96337711 96337831 -23946481 - PB1 SINE Alu -4 123 1 6 164 341 250 36 40 chr13 96337837 96337947 -23946365 - B1F SINE Alu 0 117 22 6 1320 916 115 14 28 chr13 96338010 96338153 -23946159 + B1_Mur3 SINE Alu 1 141 -8 6 1320 1386 215 85 7 chr13 96338452 96338747 -23945565 + ORR1D2 LTR MaLR 53 370 0 6 1320 2818 191 19 45 chr13 96338747 96339319 -23944993 + ORR1D2-int LTR MaLR 1 557 -813 6 1320 551 144 21 0 chr13 96339342 96339438 -23944874 + ORR1D2 LTR MaLR 266 363 -7 6 1320 1807 168 70 0 chr13 96339438 96339754 -23944558 + ORR1C1 LTR MaLR 1 338 -40 6 1320 1247 77 23 12 chr13 96339755 96339927 -23944385 + B2_Mm1t SINE B2 2 175 -18 6 1320 345 94 37 19 chr13 96339967 96340021 -23944291 + ORR1C1 LTR MaLR 330 384 0 6 1320 345 256 45 23 chr13 96340568 96340656 -23943656 + ID_B1 SINE B4 72 161 -63 6 1320 323 253 121 0 chr13 96340589 96340680 -23943632 + PB1D10 SINE Alu 10 111 -6 6 1320 1620 148 84 14 chr13 96340876 96341163 -23943149 - ORR1D1 LTR MaLR -1 373 67 6 1320 1493 97 30 26 chr13 96341164 96341430 -23942882 - L1_Rod LINE L1 -4133 1714 1448 6 1320 501 131 0 0 chr13 96341430 96341537 -23942775 + (TC)n Simple_repeat Simple_repeat 2 108 0 6 1320 233 69 0 0 chr13 96341537 96341566 -23942746 + (TG)n Simple_repeat Simple_repeat 1 29 0 6 1320 318 26 0 0 chr13 96341573 96341612 -23942700 + (TC)n Simple_repeat Simple_repeat 2 40 0 6 1320 231 36 0 0 chr13 96341612 96341639 -23942673 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1320 380 120 132 13 chr13 96341641 96341717 -23942595 - L1_Rod LINE L1 -4433 1414 1330 6 1320 787 67 0 9 chr13 96341718 96341824 -23942488 - B2_Mm2 SINE B2 -2 193 89 6 1320 247 290 88 61 chr13 96341832 96341946 -23942366 - MER92C LTR ERV1 -315 239 123 6 1320 681 154 67 30 chr13 96342237 96342371 -23941941 - B2_Mm2 SINE B2 -56 139 1 6 1320 4376 184 40 4 chr13 96342372 96343196 -23941116 - L1_Rod LINE L1 -6271 901 48 6 1320 1375 183 110 37 chr13 96343207 96343434 -23940878 - L1_Mur3 LINE L1 -3716 2164 1904 6 1320 2357 102 6 3 chr13 96343434 96343760 -23940552 - ORR1A2 LTR MaLR 0 327 1 6 1320 1375 201 98 35 chr13 96343760 96343935 -23940377 - L1_Mur3 LINE L1 -3977 1903 1756 6 1320 554 203 146 15 chr13 96343939 96344069 -23940243 - B1F2 SINE Alu 0 149 3 6 1320 1570 185 75 122 chr13 96344069 96344387 -23939925 - L1_Mur3 LINE L1 -4104 1776 1426 6 1320 198 0 0 0 chr13 96344387 96344409 -23939903 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 6 1320 1570 199 76 102 chr13 96344409 96344760 -23939552 - L1_Mur3 LINE L1 -4455 1425 1127 6 1320 1098 218 70 193 chr13 96344792 96345337 -23938975 + RLTR12B LTR ERVK 42 519 -9 6 1320 456 250 0 0 chr13 96345346 96345434 -23938878 - L1_Mur3 LINE L1 -6613 1115 1028 6 1320 342 0 0 0 chr13 96345443 96345481 -23938831 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1320 1329 104 0 5 chr13 96345531 96345715 -23938597 - B2_Mm2 SINE B2 -1 194 12 7 1320 362 189 0 0 chr13 96345738 96345828 -23938484 - L1_Mur3 LINE L1 -6782 946 857 6 1320 213 221 0 0 chr13 96346570 96346638 -23937674 + (TTAGGG)n Simple_repeat Simple_repeat 3 70 0 7 1320 329 308 14 0 chr13 96346865 96347011 -23937301 + (TTAGGG)n Simple_repeat Simple_repeat 3 150 0 7 1320 1137 116 0 0 chr13 96347101 96347274 -23937038 + (TTTC)n Simple_repeat Simple_repeat 3 175 0 7 1320 2470 166 124 6 chr13 96347373 96347844 -23936468 - RLTR33 LTR ERVK 0 678 1 7 1320 752 124 0 0 chr13 96348342 96348455 -23935857 - B1_Mur4 SINE Alu 0 150 38 7 1320 229 200 103 39 chr13 96348400 96348478 -23935834 - 4.5SRNA scRNA scRNA -8 86 4 7 1320 990 0 0 0 chr13 96348635 96348745 -23935567 + (TAAAA)n Simple_repeat Simple_repeat 2 111 0 7 1320 338 215 14 0 chr13 96349057 96349201 -23935111 + (TTAGGG)n Simple_repeat Simple_repeat 4 149 0 7 1320 418 314 11 17 chr13 96349279 96349454 -23934858 + (TTAGGG)n Simple_repeat Simple_repeat 3 176 0 7 1320 200 242 11 0 chr13 96349651 96349746 -23934566 + (TTAGGG)n Simple_repeat Simple_repeat 6 101 0 7 1320 248 322 0 67 chr13 96349795 96349988 -23934324 + (TTAGGG)n Simple_repeat Simple_repeat 1 180 0 7 1320 209 308 0 0 chr13 96349953 96350005 -23934307 + (CTAGGG)n Simple_repeat Simple_repeat 2 53 0 7 1320 380 252 165 66 chr13 96350068 96350084 -23934228 - CYRA11_Mm Unknown Y-chromosome -206 411 393 7 1320 189 74 0 0 chr13 96350084 96350111 -23934201 + (TTAGGG)n Simple_repeat Simple_repeat 3 29 0 7 1320 380 252 165 66 chr13 96350111 96350125 -23934187 - CYRA11_Mm Unknown Y-chromosome -225 392 181 7 1320 917 156 179 0 chr13 96350125 96350304 -23934008 + URR1B DNA MER1_type 1 211 -14 7 1320 214 343 14 0 chr13 96350314 96350384 -23933928 - ID4_ SINE ID -11 72 2 7 1320 216 0 0 0 chr13 96350660 96350684 -23933628 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1320 711 0 0 0 chr13 96350685 96350764 -23933548 + (TATATG)n Simple_repeat Simple_repeat 2 80 0 7 1320 246 155 276 0 chr13 96351756 96351814 -23932498 + B3 SINE B2 1 74 -142 7 1320 25 31 0 0 chr13 96351849 96351881 -23932431 + AT_rich Low_complexity Low_complexity 1 32 0 7 1320 583 293 46 42 chr13 96352195 96352412 -23931900 + L1M3 LINE L1 3471 3688 -2452 7 1320 413 240 19 39 chr13 96352412 96352516 -23931796 + B3 SINE B2 6 107 -109 7 1320 402 289 35 0 chr13 96352622 96352736 -23931576 + B3 SINE B2 92 209 -7 7 1320 996 257 122 11 chr13 96352742 96353120 -23931192 + L1M3 LINE L1 3663 4082 -2058 7 1320 466 125 14 0 chr13 96353205 96353277 -23931035 - RLTR11A2 LTR ERVK 0 527 455 7 1320 1521 94 9 18 chr13 96353274 96353491 -23930821 - RLTR11A2 LTR ERVK -312 215 1 7 1320 272 91 23 0 chr13 96354450 96354494 -23929818 + (TCC)n Simple_repeat Simple_repeat 1 45 0 7 1320 296 240 75 28 chr13 96354650 96354757 -23929555 + L1M3 LINE L1 4107 4218 -1922 7 1320 232 214 0 0 chr13 96354893 96354935 -23929377 + ID4 SINE ID 31 72 -11 7 1320 767 134 25 0 chr13 96356121 96356240 -23928072 - B3 SINE B2 -93 123 2 7 1320 385 195 11 84 chr13 96356481 96356576 -23927736 + MTEa LTR MaLR 279 366 -13 7 1320 2057 168 30 8 chr13 96356757 96357123 -23927189 - ORR1C1 LTR MaLR 0 378 5 7 1320 265 326 0 0 chr13 96357123 96357212 -23927100 - L1M4 LINE L1 -305 5873 5785 7 1320 241 333 97 66 chr13 96359583 96359779 -23924533 - LTR16C LTR ERVL 0 489 288 7 1320 369 0 0 0 chr13 96360688 96360729 -23923583 + (GA)n Simple_repeat Simple_repeat 1 41 0 7 1320 536 253 82 0 chr13 96362081 96362227 -23922085 - RSINE1 SINE B4 -7 158 1 7 1320 1107 63 0 7 chr13 96362326 96362469 -23921843 - B1_Mus1 SINE Alu -1 147 6 7 1320 248 242 32 8 chr13 96362366 96362491 -23921821 - ORR1B1-int LTR MaLR -755 754 627 7 1320 371 165 0 132 chr13 96362994 96363085 -23921227 + ID2 SINE ID 2 80 -3 7 1320 335 303 52 58 chr13 96363369 96363523 -23920789 + MLT1H LTR MaLR 13 165 -384 7 1320 342 274 5 11 chr13 96363578 96363768 -23920544 + (TG)n Simple_repeat Simple_repeat 1 188 0 7 1320 740 300 69 62 chr13 96363770 96363842 -23920470 - B4 SINE B4 -1 291 228 7 1320 493 278 82 44 chr13 96363842 96364000 -23920312 - RSINE1 SINE B4 0 165 2 7 1320 740 300 69 62 chr13 96364000 96364215 -23920097 - B4 SINE B4 -65 227 2 7 1320 212 154 0 0 chr13 96364247 96364286 -23920026 + (TGGG)n Simple_repeat Simple_repeat 2 40 0 7 1320 694 282 0 67 chr13 96364525 96364719 -23919593 + B3A SINE B2 2 182 -16 7 1320 1056 164 0 0 chr13 96364719 96365059 -23919253 + (CA)n Simple_repeat Simple_repeat 1 340 0 7 1320 307 214 14 41 chr13 96365063 96365105 -23919207 + HAL1-3A_ME LINE L1 1975 2016 -842 7 1320 1116 99 0 0 chr13 96365105 96365285 -23919027 + (CA)n Simple_repeat Simple_repeat 1 183 -23 7 1320 1116 99 0 0 chr13 96365290 96365311 -23919001 + (CA)n Simple_repeat Simple_repeat 184 206 0 7 1320 307 214 14 41 chr13 96365311 96365335 -23918977 + HAL1-3A_ME LINE L1 2022 2044 -814 7 1320 2633 156 10 63 chr13 96366364 96366885 -23917427 - RLTR11A LTR ERVK -31 497 5 7 1320 300 330 8 63 chr13 96366989 96367064 -23917248 + PB1 SINE Alu 5 73 -54 7 1320 870 152 72 0 chr13 96367064 96367202 -23917110 + B1_Mur4 SINE Alu 1 148 -2 7 1320 513 44 0 0 chr13 96367209 96367277 -23917035 + (TATG)n Simple_repeat Simple_repeat 1 68 0 7 1320 300 330 8 63 chr13 96367277 96367319 -23916993 + PB1 SINE Alu 81 122 -5 7 1320 1228 48 0 0 chr13 96367455 96367601 -23916711 - B1_Mus2 SINE Alu 0 147 2 7 1320 296 359 31 0 chr13 96367620 96367748 -23916564 + MER5A1 DNA MER1_type 2 133 -33 7 1320 470 220 33 0 chr13 96368778 96368869 -23915443 - PB1D10 SINE Alu -8 109 16 7 1320 324 267 44 0 chr13 96368795 96368885 -23915427 - ID_B1 SINE B4 -51 173 80 7 1320 398 209 8 23 chr13 96369289 96369421 -23914891 + CT-rich Low_complexity Low_complexity 1 130 0 7 1320 376 296 94 16 chr13 96369454 96369581 -23914731 - B1F SINE Alu -6 143 7 7 1320 1029 205 5 10 chr13 96369679 96369871 -23914441 - B3 SINE B2 -25 191 1 7 1320 248 343 65 0 chr13 96369912 96370020 -23914292 - Charlie1b DNA MER1_type -261 262 148 7 1320 27 0 0 0 chr13 96371759 96371786 -23912526 + AT_rich Low_complexity Low_complexity 1 27 0 7 1320 408 177 0 0 chr13 96372290 96372352 -23911960 - B1_Mur3 SINE Alu -87 62 1 7 1320 346 317 0 0 chr13 96372291 96372373 -23911939 - B4 SINE B4 -146 146 65 7 1320 400 291 0 0 chr13 96375236 96375339 -23908973 - RSINE1 SINE B4 -60 105 3 7 1320 633 27 0 0 chr13 96376052 96376127 -23908185 + (TC)n Simple_repeat Simple_repeat 1 75 0 7 1320 799 316 68 17 chr13 96376473 96376978 -23907334 + MER21B LTR ERV1 1 727 -136 7 1320 252 0 0 0 chr13 96377466 96377494 -23906818 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1320 796 88 175 8 chr13 96377494 96377620 -23906692 - B1_Mus1 SINE Alu 0 148 2 7 1320 817 216 0 7 chr13 96378734 96378883 -23905429 - B1_Mur2 SINE Alu 0 149 2 7 1320 378 225 12 12 chr13 96378991 96379072 -23905240 + PB1D10 SINE Alu 30 110 -7 7 1320 745 163 16 0 chr13 96379075 96379204 -23905108 + B1_Mur3 SINE Alu 19 149 0 7 1320 283 227 102 55 chr13 96379236 96379350 -23904962 + L1MEf LINE L1 545 661 -5539 7 1320 393 276 60 125 chr13 96379367 96379599 -23904713 + ID_B1 SINE B4 1 217 -7 7 1320 956 219 54 0 chr13 96379684 96379889 -23904423 + B3 SINE B2 1 216 0 7 1320 349 255 168 27 chr13 96379920 96380218 -23904094 + L1M2 LINE L1 4964 5303 -840 7 1320 309 26 0 0 chr13 96380218 96380256 -23904056 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 7 1320 663 179 7 65 chr13 96380258 96380274 -23904038 + ID_B1 SINE B4 79 224 0 7 1320 1169 29 0 0 chr13 96380274 96380413 -23903899 + B1_Mm SINE Alu 9 147 0 7 1320 683 283 50 52 chr13 96380421 96380764 -23903548 + L1M2 LINE L1 5317 5658 -642 7 1320 614 241 7 14 chr13 96381495 96381634 -23902678 - ID_B1 SINE B4 -8 216 79 7 1320 211 106 42 21 chr13 96381757 96381805 -23902507 + (GGGTG)n Simple_repeat Simple_repeat 3 51 0 7 1320 441 0 0 0 chr13 96382694 96382743 -23901569 + (TTAG)n Simple_repeat Simple_repeat 3 51 0 7 1320 821 123 74 0 chr13 96382743 96382865 -23901447 - B1_Mus1 SINE Alu -8 140 10 7 1320 383 312 34 14 chr13 96382865 96382889 -23901423 - B4 SINE B4 -74 218 70 7 1320 228 149 43 0 chr13 96382914 96382961 -23901351 - 7SK RNA RNA -95 236 188 7 1320 246 273 0 38 chr13 96383027 96383107 -23901205 - 7SK RNA RNA -251 80 4 7 1320 371 239 138 77 chr13 96383247 96383428 -23900884 - B3A SINE B2 -6 192 1 7 1320 840 168 21 7 chr13 96383567 96383711 -23900601 - B1_Mur2 SINE Alu -1 148 3 7 1320 1200 62 0 7 chr13 96383733 96383879 -23900433 - B1_Mm SINE Alu -1 146 2 7 1320 540 238 0 0 chr13 96384007 96384112 -23900200 - MIR SINE MIR -114 148 44 7 1320 513 301 156 25 chr13 96384361 96384599 -23899713 - B4A SINE B4 -8 284 16 7 1320 181 196 18 18 chr13 96385336 96385393 -23898919 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1320 230 267 26 13 chr13 96385481 96385557 -23898755 + Charlie9 DNA MER1_type 2667 2743 -14 7 1320 232 349 47 0 chr13 96385804 96385890 -23898422 + B4A SINE B4 78 167 -125 7 1320 531 246 36 13 chr13 96385817 96385955 -23898357 + PB1D10 SINE Alu 6 144 -3 7 1320 242 300 12 0 chr13 96385927 96386007 -23898305 + B4A SINE B4 2 82 -210 7 1320 186 43 0 0 chr13 96386021 96386044 -23898268 + (TG)n Simple_repeat Simple_repeat 1 23 0 7 1320 241 260 54 14 chr13 96386925 96386999 -23897313 + MIRc SINE MIR 98 174 -94 7 1320 24 0 0 0 chr13 96388341 96388365 -23895947 + GC_rich Low_complexity Low_complexity 1 24 0 7 1320 2054 126 3 10 chr13 96389364 96389669 -23894643 - MTC LTR MaLR -8 413 111 7 1320 1264 103 32 5 chr13 96390040 96390225 -23894087 + B2_Mm2 SINE B2 2 191 -4 7 1320 1152 51 0 0 chr13 96390231 96390369 -23893943 + B1_Mus1 SINE Alu 1 138 -10 7 1320 418 301 51 50 chr13 96390577 96390823 -23893489 - Tigger7 DNA MER2_type -2116 375 158 7 1320 1078 191 21 5 chr13 96390851 96391040 -23893272 - B3 SINE B2 -24 192 1 7 1320 226 250 280 0 chr13 96391047 96391147 -23893165 - Tigger7 DNA MER2_type -2341 150 23 7 1320 1131 221 24 24 chr13 96391292 96391542 -23892770 + B4 SINE B4 38 287 -5 7 1320 453 81 0 0 chr13 96391561 96391623 -23892689 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 1320 900 206 14 41 chr13 96391862 96392080 -23892232 - B3 SINE B2 -4 212 1 8 1320 263 313 48 39 chr13 96392257 96392360 -23891952 - MER5A DNA MER1_type -3 186 83 8 1320 456 230 0 74 chr13 96392470 96392592 -23891720 + PB1D10 SINE Alu 4 116 -1 8 1320 644 237 7 67 chr13 96393561 96393710 -23890602 + ID_B1 SINE B4 83 222 -2 8 1320 965 149 170 0 chr13 96394034 96394222 -23890090 + URR1B DNA MER1_type 6 225 0 8 1320 446 253 39 39 chr13 96394082 96394238 -23890074 - CYRA11_Mm Unknown Y-chromosome -306 311 156 8 1320 437 146 117 0 chr13 96394676 96394780 -23889532 + B1_Mur1 SINE Alu 5 141 -7 8 1320 792 224 27 156 chr13 96394943 96395271 -23889041 + B4A SINE B4 1 286 -6 8 1320 451 69 0 0 chr13 96395307 96395365 -23888947 + ORR1A4 LTR MaLR 272 329 0 8 1320 835 265 30 0 chr13 96395566 96395766 -23888546 + B3 SINE B2 1 206 -10 8 1320 836 173 249 0 chr13 96395824 96395997 -23888315 + B3 SINE B2 1 216 0 8 1320 237 361 63 27 chr13 96396282 96396393 -23887919 + MLT1A1 LTR MaLR 43 157 -251 8 1320 1093 153 16 21 chr13 96396429 96396622 -23887690 - URR1B DNA MER1_type 0 225 34 8 1320 231 272 20 98 chr13 96396674 96396776 -23887536 + MLT1A1 LTR MaLR 312 405 -3 8 1320 261 0 0 0 chr13 96397722 96397751 -23886561 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1320 279 295 97 37 chr13 96398219 96398353 -23885959 - MER5A DNA MER1_type -47 142 1 8 1320 333 0 0 0 chr13 96398546 96398583 -23885729 + (TG)n Simple_repeat Simple_repeat 2 38 0 8 1320 472 182 52 0 chr13 96398588 96398665 -23885647 - RSINE1 SINE B4 -30 135 55 8 1320 1223 28 0 7 chr13 96398699 96398843 -23885469 - B1_Mus1 SINE Alu -1 147 5 8 1320 24 32 0 0 chr13 96401034 96401065 -23883247 + AT_rich Low_complexity Low_complexity 1 31 0 8 1320 1251 28 7 0 chr13 96401143 96401288 -23883024 + B1_Mus2 SINE Alu 2 147 0 8 1320 1811 164 58 115 chr13 96401439 96401887 -23882425 + MTC LTR MaLR 2 401 -20 8 1320 189 0 0 0 chr13 96402296 96402317 -23881995 + (CACAA)n Simple_repeat Simple_repeat 4 24 0 8 1320 754 215 53 149 chr13 96402414 96402736 -23881576 + B4A SINE B4 2 292 0 8 1320 602 257 137 16 chr13 96402846 96403028 -23881284 + ID_B1 SINE B4 3 206 -18 8 1320 339 318 93 0 chr13 96403250 96403379 -23880933 + MER2 DNA MER2_type 36 176 -169 8 1320 633 27 0 0 chr13 96403379 96403454 -23880858 + (CA)n Simple_repeat Simple_repeat 2 76 0 8 1320 444 233 39 10 chr13 96403463 96403567 -23880745 + PB1 SINE Alu 11 117 -10 8 1320 418 271 75 17 chr13 96403580 96403700 -23880612 + MER2 DNA MER2_type 210 336 -9 8 1320 562 283 67 60 chr13 96403807 96404089 -23880223 + B4 SINE B4 2 285 -7 8 1320 486 0 0 0 chr13 96404121 96404175 -23880137 + (CA)n Simple_repeat Simple_repeat 2 55 0 8 1320 22 0 0 0 chr13 96404185 96404207 -23880105 + AT_rich Low_complexity Low_complexity 1 22 0 8 1320 288 77 0 0 chr13 96404818 96404857 -23879455 + (T)n Simple_repeat Simple_repeat 1 39 0 8 1320 1057 78 50 0 chr13 96404857 96404998 -23879314 - B1_Mus1 SINE Alu 0 148 1 8 1320 537 16 0 0 chr13 96405086 96405148 -23879164 + (CAAG)n Simple_repeat Simple_repeat 2 63 0 8 1320 259 45 68 0 chr13 96405762 96405806 -23878506 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 8 1320 267 239 160 107 chr13 96406400 96406550 -23877762 - MIRb SINE MIR -27 241 84 8 1320 21 0 0 0 chr13 96406745 96406766 -23877546 + AT_rich Low_complexity Low_complexity 1 21 0 8 1320 210 139 342 14 chr13 96406951 96407024 -23877288 - PB1D10 SINE Alu 0 117 21 8 1320 650 248 7 22 chr13 96407018 96407154 -23877158 - B1_Mur2 SINE Alu -15 134 1 8 1320 378 0 0 0 chr13 96408193 96408235 -23876077 + (TG)n Simple_repeat Simple_repeat 2 43 0 8 1320 221 273 209 15 chr13 96408415 96408482 -23875830 + ID4_ SINE ID 1 80 -3 8 1320 281 273 182 0 chr13 96409189 96409277 -23875035 - PB1D10 SINE Alu -13 104 1 8 1320 216 0 0 0 chr13 96409760 96409784 -23874528 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1320 508 311 60 19 chr13 96409927 96410143 -23874169 + MER33 DNA MER1_type 1 225 -99 8 1320 453 272 0 0 chr13 96410196 96410299 -23874013 + L1MA5 LINE L1 6185 6287 -13 8 1320 23 0 0 0 chr13 96410420 96410443 -23873869 + AT_rich Low_complexity Low_complexity 1 23 0 8 1320 241 331 64 87 chr13 96411677 96411849 -23872463 + MIR SINE MIR 14 181 -81 8 1320 216 182 0 0 chr13 96411861 96411905 -23872407 + (CACG)n Simple_repeat Simple_repeat 4 47 0 8 1320 206 263 13 38 chr13 96411907 96411986 -23872326 + CT-rich Low_complexity Low_complexity 3 79 0 8 1320 854 219 68 19 chr13 96412009 96412214 -23872098 - B3 SINE B2 -1 215 1 8 1320 236 196 175 0 chr13 96412250 96412347 -23871965 + L1MB5 LINE L1 5221 5334 -812 8 1320 992 288 118 30 chr13 96412414 96413148 -23871164 + L1MB5 LINE L1 5359 6160 -23 8 1320 2860 170 15 64 chr13 96414092 96414683 -23869629 + RLTR20B3 LTR ERVK 1 562 -15 8 1320 1974 316 88 30 chr13 96415025 96415524 -23868788 + Lx8 LINE L1 6450 6975 -498 8 1320 1791 176 52 24 chr13 96415524 96415907 -23868405 + ORR1B1 LTR MaLR 1 394 0 8 1320 1974 316 88 30 chr13 96415907 96416366 -23867946 + Lx8 LINE L1 6976 7463 -10 8 1320 299 191 14 42 chr13 96417278 96417349 -23866963 - tRNA-Ala-GCY_ tRNA tRNA -4 71 3 8 1320 1139 186 222 7 chr13 96417402 96417695 -23866617 - Lx7 LINE L1 -502 7194 6839 8 1320 375 274 147 70 chr13 96417689 96417948 -23866364 + Lx7 LINE L1 7206 7484 -212 8 1320 320 103 17 0 chr13 96418351 96418409 -23865903 + (TC)n Simple_repeat Simple_repeat 2 60 0 8 1320 272 146 0 0 chr13 96418422 96418463 -23865849 - Lx9 LINE L1 -947 6697 6657 8 1320 1752 215 105 5 chr13 96418465 96418914 -23865398 + Lx9 LINE L1 7144 7637 -7 8 1320 390 254 195 3 chr13 96418936 96419096 -23865216 - B3A SINE B2 0 216 2 8 1320 602 234 65 0 chr13 96419207 96419361 -23864951 + ID_B1 SINE B4 2 165 -59 8 1320 1903 104 96 16 chr13 96419561 96419864 -23864448 + ORR1A2 LTR MaLR 1 327 0 8 1320 409 301 105 48 chr13 96421008 96421426 -23862886 + MER52-int LTR ERV1 3636 4077 -3014 8 1320 486 282 25 8 chr13 96421895 96422013 -23862299 + RMER10B LTR ERVL 269 388 -10 8 1320 1209 48 0 20 chr13 96422046 96422196 -23862116 + B1_Mus1 SINE Alu 2 148 0 8 1320 514 219 21 0 chr13 96422205 96422301 -23862011 - B3A SINE B2 -96 102 5 8 1320 375 250 17 43 chr13 96422807 96422924 -23861388 - PB1D10 SINE Alu -3 114 1 8 1320 886 278 111 9 chr13 96423002 96423424 -23860888 - L1M4 LINE L1 -513 5670 5197 8 1320 978 168 0 0 chr13 96423474 96423623 -23860689 + B1_Mur3 SINE Alu 1 149 0 8 1320 786 280 65 40 chr13 96423784 96424137 -23860175 - L1M4 LINE L1 -976 5170 4809 8 1320 795 148 0 15 chr13 96424205 96424335 -23859977 - B1_Mur4 SINE Alu -2 148 21 8 1320 386 212 76 122 chr13 96424335 96424368 -23859944 - B4 SINE B4 -59 202 70 8 1320 812 10 10 0 chr13 96424415 96424512 -23859800 + (TC)n Simple_repeat Simple_repeat 1 98 0 8 1320 406 277 50 0 chr13 96424564 96424665 -23859647 - B1F2 SINE Alu -41 108 3 8 1320 498 311 132 0 chr13 96424759 96424926 -23859386 - ID_B1 SINE B4 -4 220 32 8 1320 227 210 153 47 chr13 96424952 96425037 -23859275 + MER113 DNA MER1_type 302 395 -126 8 1320 216 0 0 0 chr13 96425129 96425153 -23859159 + (T)n Simple_repeat Simple_repeat 1 24 0 8 1320 3571 10 0 0 chr13 96425768 96426162 -23858150 + L1Md_A LINE L1 6188 6581 -1 8 1320 551 239 25 25 chr13 96426729 96426849 -23857463 + B1F SINE Alu 1 120 -29 8 1320 231 292 46 0 chr13 96426913 96426978 -23857334 + B1F2 SINE Alu 44 111 -38 8 1320 396 0 0 0 chr13 96426982 96427026 -23857286 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 8 1320 697 265 97 50 chr13 96428213 96428491 -23855821 + B4A SINE B4 1 291 -1 8 1320 249 312 29 14 chr13 96428536 96428676 -23855636 + (TATG)n Simple_repeat Simple_repeat 2 143 0 8 1320 710 175 0 0 chr13 96428992 96429106 -23855206 + B1_Mur1 SINE Alu 33 146 -3 8 1320 772 290 0 6 chr13 96430488 96430651 -23853661 - RSINE1 SINE B4 -2 163 2 8 1320 351 0 0 0 chr13 96431306 96431345 -23852967 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 8 1320 309 251 7 28 chr13 96431345 96431430 -23852882 - PB1D10 SINE Alu -2 147 49 8 1320 299 191 0 14 chr13 96431936 96432005 -23852307 + CT-rich Low_complexity Low_complexity 1 68 0 8 1320 276 314 0 0 chr13 96432012 96432082 -23852230 - ID4 SINE ID -13 70 1 8 1320 479 290 33 92 chr13 96432084 96432153 -23852159 - ID_B1 SINE B4 -1 223 163 8 1320 1792 167 85 0 chr13 96432153 96432494 -23851818 - ORR1D1 LTR MaLR -4 370 1 8 1320 479 305 39 86 chr13 96432494 96432616 -23851696 - ID_B1 SINE B4 -125 167 47 8 1320 608 278 54 78 chr13 96433295 96433591 -23850721 + B4A SINE B4 4 292 0 8 1320 717 248 65 15 chr13 96433742 96433943 -23850369 + B3 SINE B2 1 211 -5 8 1320 3326 43 5 2 chr13 96434336 96434731 -23849581 - MTA_Mm LTR MaLR 0 396 1 8 1320 588 195 131 102 chr13 96436700 96436906 -23847406 - B3 SINE B2 -3 213 2 8 1320 183 167 0 0 chr13 96437260 96437302 -23847010 + G-rich Low_complexity Low_complexity 6 47 0 8 1320 291 321 60 67 chr13 96438034 96438184 -23846128 + MIR SINE MIR 114 262 0 8 1320 549 0 0 0 chr13 96438529 96438590 -23845722 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1320 2534 98 26 31 chr13 96438631 96439020 -23845292 + ORR1B1 LTR MaLR 7 393 -1 8 1320 431 304 92 18 chr13 96439190 96439471 -23844841 + L1M4 LINE L1 4879 5180 -966 8 1320 212 184 0 20 chr13 96439505 96439555 -23844757 + CT-rich Low_complexity Low_complexity 2 50 0 8 1320 759 119 17 8 chr13 96439557 96439676 -23844636 - PB1D9 SINE Alu 0 120 1 8 1320 311 248 107 66 chr13 96439682 96439803 -23844509 + L1M4 LINE L1 5278 5403 -761 8 1320 933 247 66 62 chr13 96440035 96440355 -23843957 + MTEb LTR MaLR 56 376 -3 9 1320 414 288 118 48 chr13 96440438 96440624 -23843688 + MER20B DNA MER1_type 192 390 -393 9 1320 238 346 60 80 chr13 96440647 96440898 -23843414 + MER20B DNA MER1_type 467 712 -71 9 1320 672 13 0 0 chr13 96441064 96441141 -23843171 + (CA)n Simple_repeat Simple_repeat 1 77 0 9 1320 1069 65 50 0 chr13 96442026 96442165 -23842147 - B1_Mus2 SINE Alu 0 147 2 9 1320 219 306 80 44 chr13 96442563 96442676 -23841636 - PB1D10 SINE Alu 0 117 1 9 1320 247 61 20 54 chr13 96443831 96443890 -23840422 + PB1D10 SINE Alu 70 126 -1 9 1320 602 303 0 13 chr13 96444208 96444365 -23839947 - RSINE1 SINE B4 0 165 11 9 1320 967 147 6 6 chr13 96444623 96444801 -23839511 + CT-rich Low_complexity Low_complexity 2 179 0 9 1320 1210 62 0 0 chr13 96446154 96446300 -23838012 + B1_Mus1 SINE Alu 3 148 0 9 1320 23 0 0 0 chr13 96446454 96446477 -23837835 + AT_rich Low_complexity Low_complexity 1 23 0 9 1320 23 68 0 0 chr13 96446568 96446612 -23837700 + AT_rich Low_complexity Low_complexity 1 44 0 9 1320 270 0 0 0 chr13 96446619 96446649 -23837663 + (TG)n Simple_repeat Simple_repeat 2 31 0 9 1320 347 188 318 0 chr13 96446651 96446736 -23837576 - RSINE1 SINE B4 -51 114 3 9 1320 964 152 14 0 chr13 96446959 96447104 -23837208 + B1_Mur4 SINE Alu 4 150 0 9 1320 1033 201 19 14 chr13 96447369 96447581 -23836731 + B3 SINE B2 4 216 0 9 1320 218 211 0 17 chr13 96447611 96447669 -23836643 + A-rich Low_complexity Low_complexity 3 59 0 9 1320 21 0 0 0 chr13 96448180 96448201 -23836111 + AT_rich Low_complexity Low_complexity 1 21 0 9 1320 2744 110 41 7 chr13 96448337 96448750 -23835562 + RLTR23 LTR ERV1 2 428 -2 9 1320 719 278 24 0 chr13 96449451 96449620 -23834692 - B3A SINE B2 -24 174 2 9 1320 391 247 12 0 chr13 96450225 96450306 -23834006 - ID4 SINE ID 0 83 2 9 1320 230 266 94 0 chr13 96450356 96450420 -23833892 + ID4_ SINE ID 6 75 -8 9 1320 198 0 0 0 chr13 96451964 96451986 -23832326 + (A)n Simple_repeat Simple_repeat 1 22 0 9 1320 312 102 0 0 chr13 96454147 96454196 -23830116 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 1320 385 290 112 46 chr13 96454200 96454352 -23829960 - RSINE1 SINE B4 0 165 4 9 1320 290 238 49 10 chr13 96454380 96454482 -23829830 - L1M4 LINE L1 -314 5864 5759 9 1320 836 288 107 10 chr13 96455277 96455575 -23828737 + MTD LTR MaLR 54 380 -39 9 1320 180 121 121 0 chr13 96456227 96456260 -23828052 + L2b LINE L2 3331 3367 -8 9 1320 215 79 0 26 chr13 96456691 96456730 -23827582 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 9 1320 320 286 81 32 chr13 96456870 96456993 -23827319 + MER106A DNA MER1_type 108 236 0 9 1320 721 295 110 83 chr13 96457993 96458420 -23825892 - ERVL-B4-int LTR ERVL -3587 2127 1697 9 1320 532 264 90 28 chr13 96458420 96458564 -23825748 - RSINE1 SINE B4 -8 157 5 9 1320 721 295 110 83 chr13 96458564 96458772 -23825540 - ERVL-B4-int LTR ERVL -4018 1696 1475 9 1320 1974 164 24 29 chr13 96458942 96459351 -23824961 + RMER17C LTR ERVK 1 407 -3 9 1320 1099 134 112 60 chr13 96459929 96460144 -23824168 + URR1A DNA MER1_type 1 226 0 9 1320 254 237 68 0 chr13 96460528 96460587 -23823725 + MER119 DNA MER1_type 59 121 -462 9 1320 2159 145 67 16 chr13 96460728 96461100 -23823212 + ORR1B1 LTR MaLR 1 391 -3 9 1320 744 236 30 35 chr13 96461334 96461532 -23822780 - B3A SINE B2 -1 197 1 9 1320 797 110 8 0 chr13 96461707 96461834 -23822478 + (GA)n Simple_repeat Simple_repeat 2 129 0 9 1320 432 0 0 0 chr13 96461834 96461881 -23822431 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 9 1320 691 239 112 61 chr13 96461881 96462077 -23822235 + B4 SINE B4 86 291 -1 9 1320 204 125 0 0 chr13 96462559 96462591 -23821721 + (TG)n Simple_repeat Simple_repeat 2 33 0 9 1320 487 267 29 37 chr13 96462599 96462735 -23821577 - RSINE1 SINE B4 -28 137 3 9 1320 233 194 48 16 chr13 96463691 96463748 -23820564 + L1MB2 LINE L1 6082 6141 -30 9 1320 240 35 0 0 chr13 96463748 96463777 -23820535 + (TA)n Simple_repeat Simple_repeat 2 30 0 9 1320 460 149 126 113 chr13 96463892 96464043 -23820269 - RMER10A LTR ERVL 0 442 290 9 1320 1377 176 48 54 chr13 96464186 96464522 -23819790 - RMER10A LTR ERVL -108 334 1 9 1320 1410 54 0 0 chr13 96464574 96464832 -23819480 + (TCTA)n Simple_repeat Simple_repeat 1 258 0 9 1320 385 291 69 23 chr13 96464857 96464887 -23819425 + B4 SINE B4 59 94 -198 9 1320 648 139 46 0 chr13 96464887 96464995 -23819317 + B1_Mur3 SINE Alu 2 114 -35 9 1320 234 0 0 0 chr13 96464997 96465023 -23819289 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 9 1320 350 341 0 28 chr13 96465273 96465415 -23818897 - B1F SINE Alu -9 140 3 9 1320 386 239 329 0 chr13 96465475 96465642 -23818670 + ID_B1 SINE B4 2 223 -1 9 1320 2574 226 34 12 chr13 96465903 96465978 -23818334 - Lx7 LINE L1 -276 7420 7344 9 1320 315 0 0 0 chr13 96465978 96466013 -23818299 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 9 1320 2574 226 34 12 chr13 96466013 96466527 -23817785 - Lx7 LINE L1 -353 7343 6818 9 1320 180 152 0 0 chr13 96467624 96467657 -23816655 + (TATG)n Simple_repeat Simple_repeat 4 36 0 9 1321 873 154 0 20 chr13 96469044 96469190 -23815122 + B1_Mur4 SINE Alu 6 148 -2 9 1321 798 90 21 63 chr13 96470002 96470144 -23814168 - URR1B DNA MER1_type -1 224 89 9 1321 269 286 31 75 chr13 96470144 96470159 -23814153 + CYRA11_Mm Unknown Y-chromosome 172 321 -296 9 1321 213 95 0 67 chr13 96470262 96470307 -23814005 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 9 1321 26 30 0 0 chr13 96471603 96471636 -23812676 + AT_rich Low_complexity Low_complexity 1 33 0 9 1321 738 156 0 16 chr13 96471636 96471772 -23812540 - B1_Mur1 SINE Alu 0 149 18 9 1321 702 261 89 98 chr13 96472511 96472826 -23811486 + MER2 DNA MER2_type 3 314 -31 9 1321 237 200 0 77 chr13 96473418 96473483 -23810829 + Lx7 LINE L1 5612 5671 -2025 9 1321 417 246 55 47 chr13 96473891 96474019 -23810293 + RSINE1 SINE B4 1 129 -36 9 1321 272 283 159 38 chr13 96474226 96474358 -23809954 + ID_B1 SINE B4 70 217 -7 9 1321 485 215 122 16 chr13 96474242 96474365 -23809947 + B1_Mm SINE Alu 12 147 0 9 1321 244 131 15 62 chr13 96474365 96474430 -23809882 + (CAAA)n Simple_repeat Simple_repeat 3 64 0 9 1321 456 19 0 0 chr13 96475056 96475109 -23809203 + (TTTA)n Simple_repeat Simple_repeat 1 53 0 9 1321 721 245 0 0 chr13 96475110 96475249 -23809063 - B1_Mur3 SINE Alu -9 140 2 9 1321 201 39 0 0 chr13 96475347 96475373 -23808939 + (CCTA)n Simple_repeat Simple_repeat 1 26 0 9 1321 775 225 52 0 chr13 96475389 96475562 -23808750 + ORR1D1 LTR MaLR 185 366 -8 9 1321 691 209 101 6 chr13 96476418 96476596 -23807716 + B3A SINE B2 4 198 0 9 1321 1667 279 28 82 chr13 96478384 96478441 -23805871 + L1MB7 LINE L1 4557 4608 -1538 9 1321 266 0 0 29 chr13 96478441 96478476 -23805836 + (CAAAA)n Simple_repeat Simple_repeat 1 34 0 9 1321 1667 279 28 82 chr13 96478476 96479277 -23805035 + L1MB7 LINE L1 4609 5369 -777 9 1321 528 146 0 0 chr13 96479293 96479382 -23804930 + (CA)n Simple_repeat Simple_repeat 2 90 0 9 1321 1299 275 73 12 chr13 96479382 96479861 -23804451 + L1MB7 LINE L1 5396 5903 -281 9 1321 688 262 40 35 chr13 96479879 96480081 -23804231 - B3 SINE B2 -13 203 1 9 1321 388 322 52 6 chr13 96480422 96480594 -23803718 + MER3 DNA MER1_type 6 185 -24 9 1321 191 105 53 0 chr13 96480977 96481015 -23803297 + (CATA)n Simple_repeat Simple_repeat 4 43 0 9 1321 934 75 0 24 chr13 96481355 96481478 -23802834 - L1Md_F2 LINE L1 -155 6427 6308 9 1321 1154 85 0 18 chr13 96481478 96481646 -23802666 + L1Md_F2 LINE L1 6414 6578 -4 9 1321 617 340 39 23 chr13 96481664 96481974 -23802338 - MLT1A1 LTR MaLR -93 315 1 9 1321 243 0 0 0 chr13 96483398 96483425 -23800887 + (TG)n Simple_repeat Simple_repeat 2 28 0 9 1321 180 0 0 0 chr13 96483899 96483919 -23800393 + (CCCCCA)n Simple_repeat Simple_repeat 5 24 0 9 1321 266 312 12 0 chr13 96485218 96485298 -23799014 + PB1D10 SINE Alu 37 117 0 9 1321 205 328 0 0 chr13 96485319 96485377 -23798935 + GA-rich Low_complexity Low_complexity 3 60 0 9 1321 412 324 42 37 chr13 96486837 96487026 -23797286 - B3A SINE B2 -8 190 1 9 1321 217 283 0 0 chr13 96487483 96487536 -23796776 - ID4_ SINE ID -17 66 14 9 1321 377 246 49 42 chr13 96487550 96487694 -23796618 - B1F1 SINE Alu 0 149 5 9 1321 180 0 0 0 chr13 96488648 96488668 -23795644 + (TG)n Simple_repeat Simple_repeat 2 21 0 9 1321 684 164 13 6 chr13 96488672 96488831 -23795481 + (TA)n Simple_repeat Simple_repeat 2 161 0 9 1321 279 79 0 0 chr13 96488991 96489029 -23795283 + (TGG)n Simple_repeat Simple_repeat 1 38 0 9 1321 553 237 60 15 chr13 96489103 96489236 -23795076 - ID_B1 SINE B4 -2 222 84 9 1321 2522 127 46 14 chr13 96490498 96490929 -23793383 - Lx4A LINE L1 0 7058 6614 9 1321 1990 67 7 18 chr13 96490961 96491236 -23793076 - L1_Mus3 LINE L1 -1 6637 6366 9 1321 479 258 92 0 chr13 96492896 96493016 -23791296 + B3A SINE B2 1 131 -67 9 1321 459 35 0 0 chr13 96493029 96493086 -23791226 + (CA)n Simple_repeat Simple_repeat 1 57 0 9 1321 273 75 0 0 chr13 96493306 96493346 -23790966 + (TG)n Simple_repeat Simple_repeat 1 40 0 9 1321 486 33 0 0 chr13 96493798 96493858 -23790454 + (CA)n Simple_repeat Simple_repeat 2 61 0 9 1321 508 249 56 61 chr13 96494026 96494223 -23790089 - B3A SINE B2 -1 197 2 9 1321 285 29 0 0 chr13 96494920 96494954 -23789358 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1321 610 270 84 104 chr13 96494966 96495264 -23789048 - B4 SINE B4 0 292 1 9 1321 808 255 34 5 chr13 96496247 96496452 -23787860 + B3 SINE B2 1 211 -5 9 1321 306 0 0 0 chr13 96497958 96497992 -23786320 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 9 1321 497 278 118 45 chr13 96497998 96498243 -23786069 + MTD LTR MaLR 1 263 -156 1 1321 2145 155 49 32 chr13 96498245 96498651 -23785661 + MTC LTR MaLR 2 414 -7 1 1321 400 262 40 24 chr13 96498659 96498784 -23785528 + MTD LTR MaLR 293 419 0 1 1321 220 191 24 0 chr13 96498939 96498981 -23785331 + GA-rich Low_complexity Low_complexity 2 44 0 1 1321 528 246 0 25 chr13 96500127 96500248 -23784064 - B1_Mur3 SINE Alu -1 119 2 1 1321 730 251 119 14 chr13 96501531 96501749 -23782563 + B4 SINE B4 7 247 -45 2 1321 549 44 0 0 chr13 96502629 96502697 -23781615 + (CCA)n Simple_repeat Simple_repeat 1 68 0 3 1321 1164 271 52 25 chr13 96503128 96503495 -23780817 + MTE2b LTR MaLR 1 377 -2 4 1321 1022 194 96 10 chr13 96503523 96503731 -23780581 + URR1A DNA MER1_type 1 226 0 5 1321 916 202 54 0 chr13 96504178 96504381 -23779931 + B3 SINE B2 2 215 -1 6 1321 33 0 0 0 chr13 96504922 96504955 -23779357 + AT_rich Low_complexity Low_complexity 1 33 0 7 1321 2007 61 0 4 chr13 96504955 96505203 -23779109 - L1_Mus1 LINE L1 -2 6565 6319 8 1321 265 225 0 22 chr13 96505615 96505706 -23778606 + GA-rich Low_complexity Low_complexity 3 91 0 9 1321 21 36 0 0 chr13 96505732 96505760 -23778552 + AT_rich Low_complexity Low_complexity 1 28 0 1 1321 297 75 0 0 chr13 96505892 96505932 -23778380 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1321 469 274 60 43 chr13 96506041 96506224 -23778088 + ID_B1 SINE B4 71 265 -27 1 1321 189 0 0 0 chr13 96506327 96506348 -23777964 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 1 1321 2082 129 101 0 chr13 96506410 96506766 -23777546 + ORR1B1 LTR MaLR 1 392 -2 1 1321 214 125 42 0 chr13 96506819 96506867 -23777445 + GA-rich Low_complexity Low_complexity 4 53 0 1 1321 301 228 51 0 chr13 96507440 96507519 -23776793 + ID4_ SINE ID 1 83 0 1 1321 2323 81 55 0 chr13 96507530 96507840 -23776472 + ORR1A2 LTR MaLR 1 327 0 1 1321 1394 66 28 0 chr13 96507860 96508042 -23776270 + B2_Mm1a SINE B2 1 187 -6 1 1321 228 330 72 0 chr13 96508939 96509036 -23775276 - PB1D10 SINE Alu -13 104 1 1 1321 362 186 14 14 chr13 96509377 96509448 -23774864 - Lx8 LINE L1 -349 7124 7054 2 1321 716 187 72 0 chr13 96514763 96514902 -23769410 + B1_Mur4 SINE Alu 2 150 0 2 1321 183 80 0 0 chr13 96515068 96515093 -23769219 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2 1321 335 274 19 10 chr13 96515098 96515201 -23769111 + PB1D10 SINE Alu 2 105 -12 2 1321 227 282 221 41 chr13 96515201 96515323 -23768989 + RSINE1 SINE B4 4 147 -18 2 1321 346 291 0 0 chr13 96518303 96518389 -23765923 - B3 SINE B2 -130 86 1 2 1321 277 303 30 0 chr13 96518405 96518471 -23765841 - BC1_Mm scRNA scRNA -82 70 3 2 1321 541 222 36 36 chr13 96518822 96518962 -23765350 + B1F SINE Alu 10 149 0 2 1321 219 69 0 0 chr13 96518964 96518993 -23765319 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1321 237 318 73 0 chr13 96519022 96519132 -23765180 + L1MC4a LINE L1 7755 7872 -10 2 1321 30 0 0 0 chr13 96519306 96519336 -23764976 + AT_rich Low_complexity Low_complexity 1 30 0 3 1321 355 275 92 77 chr13 96519338 96519610 -23764702 + B4A SINE B4 2 277 -15 3 1321 1347 89 0 0 chr13 96520424 96520723 -23763589 + (TTTC)n Simple_repeat Simple_repeat 1 299 0 3 1321 263 209 45 0 chr13 96520730 96520797 -23763515 - B1_Mur1 SINE Alu -17 132 63 3 1321 240 338 83 19 chr13 96521420 96521577 -23762735 - MIRb SINE MIR -43 225 59 3 1321 917 247 36 140 chr13 96523205 96523652 -23760660 + MTE2a LTR MaLR 6 419 0 3 1321 954 280 111 6 chr13 96523848 96524182 -23760130 + MTE2b LTR MaLR 2 370 -9 3 1321 3338 95 11 6 chr13 96524998 96525474 -23758838 + Lx LINE L1 6171 6648 -6 3 1321 1234 252 48 27 chr13 96525476 96525811 -23758501 + ORR1D2 LTR MaLR 25 366 -4 3 1321 4977 229 49 42 chr13 96525813 96526043 -23758269 + ORR1D2-int LTR MaLR 2 238 -1132 3 1321 1975 206 19 19 chr13 96526043 96526459 -23757853 + MTD LTR MaLR 4 419 0 3 1321 4977 229 49 42 chr13 96526459 96527587 -23756725 + ORR1D2-int LTR MaLR 239 1370 0 3 1321 1127 215 78 117 chr13 96527587 96527972 -23756340 + ORR1D2 LTR MaLR 1 370 0 3 1321 451 212 0 43 chr13 96528126 96528313 -23755999 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 1321 857 228 12 0 chr13 96528313 96528475 -23755837 - RSINE1 SINE B4 0 165 2 4 1321 1298 143 8 29 chr13 96528510 96528755 -23755557 + RLTR11B LTR ERVK 1 240 -213 4 1321 471 112 0 0 chr13 96528755 96528835 -23755477 + (GA)n Simple_repeat Simple_repeat 1 80 0 4 1321 875 122 65 170 chr13 96528835 96528984 -23755328 + RLTR11B LTR ERVK 206 355 -98 4 1321 342 67 0 0 chr13 96528984 96529029 -23755283 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1321 875 122 65 170 chr13 96529029 96529100 -23755212 + RLTR11B LTR ERVK 356 399 -54 4 1321 1157 82 0 0 chr13 96529100 96529247 -23755065 - B1_Mus1 SINE Alu 0 148 2 4 1321 875 122 65 170 chr13 96529247 96529302 -23755010 + RLTR11B LTR ERVK 400 453 0 4 1321 256 0 24 49 chr13 96530618 96530659 -23753653 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 4 1321 1210 147 107 5 chr13 96530781 96530986 -23753326 + URR1A DNA MER1_type 1 226 0 4 1321 259 57 0 0 chr13 96531132 96531167 -23753145 + U2 snRNA snRNA 5 39 -149 4 1321 319 254 0 14 chr13 96531389 96531461 -23752851 + ID4 SINE ID 2 72 -11 4 1321 644 274 52 45 chr13 96531629 96531916 -23752396 + B4A SINE B4 2 290 -2 5 1321 259 385 26 0 chr13 96532151 96532268 -23752044 - Lx8 LINE L1 -178 7295 7176 5 1321 2491 187 20 20 chr13 96532347 96532897 -23751415 + RLTR20B2 LTR ERVK 9 558 -2 5 1321 215 180 60 0 chr13 96534466 96534516 -23749796 + A-rich Low_complexity Low_complexity 2 54 0 5 1321 207 245 19 0 chr13 96534586 96534639 -23749673 + (TA)n Simple_repeat Simple_repeat 1 54 0 5 1321 333 0 0 0 chr13 96534648 96534685 -23749627 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1321 21 0 0 0 chr13 96534964 96534985 -23749327 + AT_rich Low_complexity Low_complexity 1 21 0 5 1321 246 32 0 0 chr13 96534985 96535016 -23749296 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1321 244 0 0 53 chr13 96535561 96535599 -23748713 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 5 1321 233 259 61 12 chr13 96535702 96535784 -23748528 + B4 SINE B4 82 167 -125 5 1321 457 175 19 46 chr13 96535717 96535825 -23748487 + PB1D10 SINE Alu 12 116 -1 6 1321 939 261 5 0 chr13 96536579 96536797 -23747515 + ID_B1 SINE B4 5 223 -1 6 1321 1151 80 51 0 chr13 96537544 96537720 -23746592 + B2_Mm2 SINE B2 9 193 -2 6 1321 1363 60 38 6 chr13 96538120 96538303 -23746009 - B2_Mm2 SINE B2 -6 189 1 6 1321 234 0 0 0 chr13 96538312 96538338 -23745974 + (T)n Simple_repeat Simple_repeat 1 26 0 6 1321 1136 56 28 0 chr13 96538340 96538482 -23745830 - B1_Mus1 SINE Alu -1 147 2 6 1321 277 217 60 86 chr13 96538483 96538599 -23745713 - Lx8 LINE L1 -7 7466 7354 6 1321 287 204 258 52 chr13 96538607 96538762 -23745550 - L1M4 LINE L1 -378 5800 5614 6 1321 598 309 101 88 chr13 96538762 96539127 -23745185 + MTE2b LTR MaLR 1 370 -9 6 1321 355 284 50 25 chr13 96539191 96539350 -23744962 - L1M4 LINE L1 -1168 4978 4816 6 1321 797 171 20 20 chr13 96539609 96539758 -23744554 + B1_Mur2 SINE Alu 1 149 0 6 1321 212 0 36 0 chr13 96540016 96540044 -23744268 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 7 1321 384 246 55 0 chr13 96540773 96540880 -23743432 + B1F1 SINE Alu 9 120 0 7 1321 2216 119 51 6 chr13 96540901 96541257 -23743055 + Lx4B LINE L1 6683 7054 -4 7 1321 531 333 68 33 chr13 96541421 96541728 -23742584 + MLT1B-int LTR MaLR 260 577 -794 7 1321 204 125 0 0 chr13 96541728 96541760 -23742552 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 7 1321 422 231 24 49 chr13 96541847 96541970 -23742342 - B3A SINE B2 -78 120 1 7 1321 450 236 105 39 chr13 96542037 96542218 -23742094 + MLT1B LTR MaLR 32 224 -166 7 1321 1319 133 71 5 chr13 96542525 96542736 -23741576 + URR1A DNA MER1_type 2 226 0 7 1321 1135 155 130 0 chr13 96543565 96543765 -23740547 + URR1A DNA MER1_type 1 226 0 7 1321 189 0 0 0 chr13 96545557 96545578 -23738734 + (TG)n Simple_repeat Simple_repeat 1 21 0 7 1321 623 292 96 72 chr13 96546612 96546947 -23737365 - MER2 DNA MER2_type 0 345 3 7 1321 207 105 0 26 chr13 96547630 96547669 -23736643 + (TTG)n Simple_repeat Simple_repeat 3 40 0 8 1321 414 340 31 0 chr13 96548113 96548272 -23736040 + RSINE1 SINE B4 1 164 -1 8 1321 495 128 0 0 chr13 96548276 96548362 -23735950 + (TG)n Simple_repeat Simple_repeat 2 87 0 8 1321 192 152 0 0 chr13 96549815 96549848 -23734464 + C-rich Low_complexity Low_complexity 2 34 0 8 1321 252 0 0 0 chr13 96551423 96551451 -23732861 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 8 1321 348 297 36 9 chr13 96551822 96551934 -23732378 - PB1D7 SINE Alu -4 116 2 8 1321 613 230 53 20 chr13 96553494 96553645 -23730667 + RSINE1 SINE B4 4 159 -6 8 1321 288 0 0 0 chr13 96553698 96553730 -23730582 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1321 2331 146 76 72 chr13 96553967 96554491 -23729821 + RLTR11A2 LTR ERVK 1 526 -1 8 1321 328 295 146 43 chr13 96554760 96555061 -23729251 + LTR78 LTR ERV1 335 666 -638 8 1321 489 323 55 131 chr13 96555400 96556020 -23728292 + Lx8 LINE L1 6901 7473 0 9 1321 1018 188 14 42 chr13 96556388 96556605 -23727707 - B3 SINE B2 -5 211 1 9 1321 676 281 45 5 chr13 96556630 96556830 -23727482 - B3 SINE B2 -7 209 2 9 1321 431 234 41 41 chr13 96557486 96557633 -23726679 + B1F SINE Alu 3 149 0 9 1321 262 279 12 12 chr13 96557636 96557716 -23726596 + ID4 SINE ID 2 81 -2 9 1321 530 187 0 45 chr13 96557858 96557970 -23726342 + B1_Mus1 SINE Alu 23 129 -19 9 1321 473 291 73 15 chr13 96559660 96559796 -23724516 - B3A SINE B2 -2 196 53 9 1321 442 288 28 57 chr13 96559976 96560223 -23724089 + Charlie4a DNA MER1_type 50 289 -219 9 1321 251 359 0 0 chr13 96560354 96560432 -23723880 - ID_B1 SINE B4 -58 166 89 9 1321 2193 122 3 24 chr13 96562748 96563084 -23721228 + ORR1A4 LTR MaLR 1 329 0 9 1321 900 230 1 38 chr13 96563292 96563509 -23720803 + B3A SINE B2 2 203 -13 1 1321 222 37 0 0 chr13 96563509 96563536 -23720776 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1321 475 312 0 0 chr13 96563543 96563668 -23720644 - RSINE1 SINE B4 -16 149 25 1 1321 260 295 104 15 chr13 96564148 96564282 -23720030 + MER5A DNA MER1_type 37 182 -7 1 1321 192 125 0 0 chr13 96564351 96564383 -23719929 + (CA)n Simple_repeat Simple_repeat 1 32 0 1 1321 245 359 29 0 chr13 96564886 96564989 -23719323 + L1MD1 LINE L1 4515 4620 -1526 1 1321 260 323 37 30 chr13 96565107 96565241 -23719071 + L1MD LINE L1 4822 4956 -1190 1 1321 589 211 0 0 chr13 96565296 96565405 -23718907 + PB1D10 SINE Alu 2 110 -7 1 1321 376 247 80 70 chr13 96565417 96565617 -23718695 + L1MD LINE L1 4982 5183 -963 1 1321 229 294 29 19 chr13 96565864 96565968 -23718344 + L1MD1 LINE L1 5571 5675 -769 1 1321 282 322 122 14 chr13 96566029 96566243 -23718069 + L1MD1 LINE L1 5772 6008 -1777 1 1321 655 149 35 24 chr13 96567739 96567993 -23716319 + CT-rich Low_complexity Low_complexity 1 256 0 1 1321 192 328 81 15 chr13 96569551 96569687 -23714625 - L2b LINE L2 -5 3370 3226 1 1321 883 134 34 40 chr13 96570065 96570213 -23714099 - B1_Mus2 SINE Alu 0 147 1 1 1321 324 70 0 0 chr13 96570332 96570375 -23713937 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1 1321 641 281 54 27 chr13 96570383 96570679 -23713633 - L1MC2 LINE L1 -38 6306 6003 1 1321 205 327 94 33 chr13 96571022 96571234 -23713078 + MIRb SINE MIR 36 260 -8 1 1321 411 167 0 0 chr13 96572471 96572561 -23711751 + (CA)n Simple_repeat Simple_repeat 1 90 0 1 1321 194 286 16 0 chr13 96572567 96572630 -23711682 + MIR SINE MIR 124 187 -75 1 1321 1202 237 101 113 chr13 96572757 96573005 -23711307 - L1MC2 LINE L1 -1362 4784 4540 1 1321 832 197 88 21 chr13 96573005 96573197 -23711115 - B3 SINE B2 -11 205 1 1 1321 1202 237 101 113 chr13 96573197 96573471 -23710841 - L1MC2 LINE L1 -1607 4539 4268 1 1321 885 260 104 4 chr13 96575033 96575218 -23709094 + B4 SINE B4 13 221 -71 1 1321 411 56 0 0 chr13 96575218 96575272 -23709040 + (TAA)n Simple_repeat Simple_repeat 1 54 0 1 1321 885 260 104 4 chr13 96575272 96575337 -23708975 + B4 SINE B4 222 287 -5 1 1321 744 108 83 0 chr13 96576378 96576498 -23707814 + B3 SINE B2 1 130 -86 1 1321 318 289 111 14 chr13 96576498 96576521 -23707791 + RSINE1 SINE B4 2 158 -7 1 1321 21 57 0 0 chr13 96576529 96576564 -23707748 + AT_rich Low_complexity Low_complexity 1 35 0 1 1321 960 212 20 0 chr13 96576566 96576769 -23707543 - B3 SINE B2 -9 207 1 1 1321 504 0 0 0 chr13 96577651 96577707 -23706605 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1321 222 319 92 0 chr13 96577790 96577909 -23706403 + MIRb SINE MIR 22 151 -117 1 1321 1359 105 16 0 chr13 96578132 96578322 -23705990 + B2_Mm2 SINE B2 3 195 0 1 1321 204 40 0 0 chr13 96578455 96578480 -23705832 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1321 254 254 17 0 chr13 96579961 96580020 -23704292 + MIRc SINE MIR 109 168 -100 1 1321 240 362 9 9 chr13 96581326 96581432 -23702880 + MLT1E1A LTR MaLR 495 600 -80 1 1321 888 161 0 0 chr13 96581618 96581755 -23702557 + B1_Mur1 SINE Alu 3 139 -10 1 1321 354 250 27 0 chr13 96581807 96581919 -23702393 + (CAGA)n Simple_repeat Simple_repeat 2 116 0 1 1321 210 156 0 0 chr13 96582126 96582171 -23702141 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 1 1321 1201 75 31 16 chr13 96582172 96582430 -23701882 + (TAGA)n Simple_repeat Simple_repeat 1 262 0 1 1321 731 92 9 0 chr13 96582432 96582541 -23701771 + (TGGA)n Simple_repeat Simple_repeat 3 112 0 1 1321 180 0 0 0 chr13 96582541 96582561 -23701751 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 1 1321 226 155 34 17 chr13 96584802 96584861 -23699451 + T-rich Low_complexity Low_complexity 1 60 0 1 1321 197 159 0 22 chr13 96585441 96585486 -23698826 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1321 183 80 0 0 chr13 96586315 96586340 -23697972 + (TTC)n Simple_repeat Simple_repeat 2 26 0 1 1321 32 26 0 0 chr13 96586345 96586384 -23697928 + AT_rich Low_complexity Low_complexity 1 39 0 1 1321 579 167 10 0 chr13 96586417 96586513 -23697799 + B1_Mur1 SINE Alu 43 139 -10 1 1321 712 290 97 7 chr13 96586667 96586976 -23697336 - L1MA4A LINE L1 -373 5930 5594 1 1321 467 149 265 20 chr13 96588877 96589028 -23695284 - Lx9 LINE L1 -8 7636 7449 1 1321 232 240 20 0 chr13 96591349 96591399 -23692913 + GA-rich Low_complexity Low_complexity 2 52 0 1 1321 580 223 294 22 chr13 96591777 96592052 -23692260 + ORR1D2 LTR MaLR 5 354 -16 1 1321 517 266 6 110 chr13 96592104 96592286 -23692026 + RSINE1 SINE B4 3 165 0 1 1321 239 321 0 0 chr13 96592386 96592442 -23691870 + ID4 SINE ID 2 57 -26 1 1321 724 135 15 8 chr13 96592471 96592605 -23691707 + (CATATA)n Simple_repeat Simple_repeat 2 136 0 1 1321 409 239 43 17 chr13 96593313 96593428 -23690884 + PB1D7 SINE Alu 1 118 -2 1 1321 595 297 86 53 chr13 96594332 96594713 -23689599 + Lx8 LINE L1 5756 6179 -1294 1 1321 378 0 0 0 chr13 96594713 96594755 -23689557 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1321 595 295 91 40 chr13 96594755 96594915 -23689397 + Lx8 LINE L1 6180 6345 -1128 1 1321 1532 264 91 32 chr13 96594923 96595486 -23688826 + Lx8 LINE L1 6878 7473 0 1 1321 1046 105 0 12 chr13 96595497 96595661 -23688651 + (GAAA)n Simple_repeat Simple_repeat 3 164 0 1 1321 195 42 0 0 chr13 96598253 96598277 -23686035 + (CA)n Simple_repeat Simple_repeat 1 24 0 1 1321 849 131 0 0 chr13 96599048 96599224 -23685088 + (TC)n Simple_repeat Simple_repeat 2 177 0 1 1321 283 54 0 0 chr13 96599224 96599261 -23685051 + (TCTG)n Simple_repeat Simple_repeat 1 37 0 1 1321 906 125 0 0 chr13 96599261 96599437 -23684875 + (TC)n Simple_repeat Simple_repeat 1 176 0 1 1321 207 217 0 48 chr13 96599437 96599463 -23684849 + polypyrimidine Low_complexity Low_complexity 1 25 0 1 1322 743 156 0 0 chr13 96600162 96600290 -23684022 + B1_Mus2 SINE Alu 19 146 -1 1 1322 207 0 0 0 chr13 96600661 96600684 -23683628 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 1 1322 504 0 0 0 chr13 96600841 96600897 -23683415 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1322 378 287 66 58 chr13 96600991 96601128 -23683184 + B1F SINE Alu 6 143 -6 1 1322 502 219 6 13 chr13 96601128 96601285 -23683027 + GA-rich Low_complexity Low_complexity 1 156 0 1 1322 183 347 41 14 chr13 96601365 96601438 -23682874 + MIR SINE MIR 73 147 -115 1 1322 321 89 0 0 chr13 96601732 96601777 -23682535 + (CAA)n Simple_repeat Simple_repeat 2 46 0 1 1322 222 118 0 0 chr13 96602766 96602800 -23681512 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1322 602 319 90 50 chr13 96603891 96604270 -23680042 + MLT1F2 LTR MaLR 1 394 -166 1 1322 354 179 0 15 chr13 96604542 96604610 -23679702 + B1_Mur1 SINE Alu 82 148 -1 1 1322 925 288 104 23 chr13 96604619 96604978 -23679334 + L1MB8 LINE L1 5311 5682 -496 1 1322 429 70 0 0 chr13 96604978 96605035 -23679277 + (TA)n Simple_repeat Simple_repeat 1 57 0 1 1322 925 288 104 23 chr13 96605035 96605155 -23679157 + L1MB8 LINE L1 5683 5829 -349 1 1322 441 190 0 12 chr13 96605272 96605352 -23678960 - B1_Mur3 SINE Alu -70 79 1 1 1322 1000 218 24 5 chr13 96605432 96605639 -23678673 - B3 SINE B2 -5 211 1 1 1322 256 276 121 91 chr13 96605792 96606056 -23678256 - B4A SINE B4 -24 268 2 1 1322 236 263 142 74 chr13 96606339 96606487 -23677825 - MIRc SINE MIR -99 169 12 1 1322 794 100 7 0 chr13 96608199 96608339 -23675973 + (CA)n Simple_repeat Simple_repeat 1 141 0 1 1322 710 266 26 5 chr13 96608377 96608570 -23675742 + B3 SINE B2 1 197 -19 1 1322 604 287 42 0 chr13 96608695 96608862 -23675450 - B3A SINE B2 -16 182 9 1 1322 4217 61 4 9 chr13 96608908 96609451 -23674861 - L1Md_F2 LINE L1 -12 6570 6031 1 1322 189 0 0 0 chr13 96609483 96609504 -23674808 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1322 792 210 107 10 chr13 96609540 96609737 -23674575 - B3 SINE B2 0 216 1 1 1322 316 169 72 28 chr13 96610959 96611054 -23673258 - PB1D10 SINE Alu -19 101 2 1 1322 432 0 0 0 chr13 96611997 96612045 -23672267 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1322 907 227 53 15 chr13 96612159 96612365 -23671947 - B3 SINE B2 -2 214 1 1 1322 285 343 111 5 chr13 96612995 96613194 -23671118 - MIRc SINE MIR -30 238 19 1 1322 216 0 0 0 chr13 96614455 96614479 -23669833 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1322 414 189 39 133 chr13 96615191 96615319 -23668993 + PB1D10 SINE Alu 1 116 -1 1 1322 303 219 0 0 chr13 96615319 96615415 -23668897 + GA-rich Low_complexity Low_complexity 1 96 0 1 1322 3046 47 5 20 chr13 96615627 96616053 -23668259 + L1Md_F3 LINE L1 6200 6584 0 1 1322 503 230 95 15 chr13 96616656 96616793 -23667519 + B1F2 SINE Alu 2 149 0 1 1322 984 110 14 7 chr13 96617180 96617326 -23666986 + B1_Mus1 SINE Alu 2 148 0 1 1322 1508 52 10 10 chr13 96617431 96617624 -23666688 + B2_Mm2 SINE B2 1 193 -2 1 1322 391 184 18 18 chr13 96617625 96617736 -23666576 + (CATATA)n Simple_repeat Simple_repeat 1 111 0 1 1322 525 71 0 0 chr13 96617784 96617854 -23666458 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 1322 441 173 123 0 chr13 96617865 96617946 -23666366 - PB1D9 SINE Alu -21 99 9 1 1322 236 268 0 112 chr13 96617879 96617959 -23666353 - MT2B LTR ERVL -371 230 160 1 1322 685 266 85 9 chr13 96617987 96618211 -23666101 + Lx8 LINE L1 6987 7227 -246 1 1322 1886 178 48 11 chr13 96618603 96618955 -23665357 + ORR1D1 LTR MaLR 8 372 -2 1 1322 621 0 0 0 chr13 96619034 96619103 -23665209 + (TTATG)n Simple_repeat Simple_repeat 3 71 0 1 1322 412 229 219 0 chr13 96621793 96621898 -23662414 + B1_Mm SINE Alu 1 128 -19 1 1322 1226 40 16 28 chr13 96621903 96622085 -23662227 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 1 1322 288 337 29 19 chr13 96622148 96622251 -23662061 + PB1D10 SINE Alu 9 112 -5 1 1322 1143 130 6 0 chr13 96622308 96622477 -23661835 + B2_Mm1t SINE B2 2 171 -22 1 1322 228 86 0 54 chr13 96622528 96622565 -23661747 + B2_Mm2 SINE B2 47 81 -114 2 1322 994 262 11 68 chr13 96622967 96623233 -23661079 + B4A SINE B4 2 252 -40 2 1322 313 304 0 0 chr13 96623278 96623357 -23660955 + (CA)n Simple_repeat Simple_repeat 1 79 0 2 1322 1610 164 59 88 chr13 96623804 96623845 -23660467 + ORR1C1 LTR MaLR 1 29 -349 2 1322 591 15 0 0 chr13 96623845 96623913 -23660399 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 1322 1610 164 59 88 chr13 96623913 96624259 -23660053 + ORR1C1 LTR MaLR 30 376 -2 2 1322 254 50 25 0 chr13 96624305 96624345 -23659967 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1322 480 89 0 0 chr13 96624898 96624977 -23659335 + (TTTTG)n Simple_repeat Simple_repeat 2 80 0 2 1322 1216 28 14 0 chr13 96624983 96625124 -23659188 - B1_Mm SINE Alu -4 143 1 2 1322 7254 48 8 3 chr13 96625770 96626681 -23657631 + L1_Mm LINE L1 3980 4894 -989 2 1322 4734 54 0 0 chr13 96626681 96627257 -23657055 + L1Md_F2 LINE L1 6007 6582 0 2 1322 276 30 0 0 chr13 96627283 96627316 -23656996 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2 1322 410 272 64 0 chr13 96627545 96627712 -23656600 + L1MB3 LINE L1 5830 6008 -304 2 1322 604 318 44 53 chr13 96628530 96628736 -23655576 + B4A SINE B4 67 270 -22 2 1322 423 0 0 0 chr13 96628764 96628811 -23655501 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1322 329 233 41 24 chr13 96629078 96629201 -23655111 - L1MC4 LINE L1 -184 7858 7734 2 1322 270 299 13 0 chr13 96629281 96629358 -23654954 - ID4_ SINE ID -2 81 4 2 1322 459 0 0 0 chr13 96630996 96631047 -23653265 + (CA)n Simple_repeat Simple_repeat 1 51 0 2 1322 228 163 0 0 chr13 96631721 96631764 -23652548 + CT-rich Low_complexity Low_complexity 2 44 0 2 1322 551 261 37 0 chr13 96631810 96631944 -23652368 + B4A SINE B4 2 140 -152 2 1322 251 98 39 0 chr13 96631946 96631997 -23652315 + (TCTCTG)n Simple_repeat Simple_repeat 2 54 0 2 1322 369 58 0 0 chr13 96632078 96632130 -23652182 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1322 272 308 81 11 chr13 96632336 96632462 -23651850 - MIR SINE MIR -22 246 110 2 1322 326 270 78 11 chr13 96632868 96632958 -23651354 + PB1D7 SINE Alu 23 118 -2 2 1322 180 0 0 0 chr13 96633190 96633210 -23651102 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2 1322 184 237 0 0 chr13 96633230 96633268 -23651044 + MIRc SINE MIR 114 151 -117 2 1322 236 279 77 173 chr13 96633281 96633333 -23650979 - LTR33 LTR ERVL -4 511 461 2 1322 458 237 26 0 chr13 96633333 96633447 -23650865 - PB1D10 SINE Alu 0 117 1 2 1322 236 279 77 173 chr13 96633447 96633706 -23650606 - LTR33 LTR ERVL -55 460 230 2 1322 372 245 117 48 chr13 96634448 96634551 -23649761 + B1F SINE Alu 40 149 0 2 1322 549 0 0 0 chr13 96634686 96634747 -23649565 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1322 443 232 239 0 chr13 96634750 96634888 -23649424 - B3A SINE B2 -26 172 2 2 1322 306 0 0 0 chr13 96635064 96635098 -23649214 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1322 237 329 180 35 chr13 96635188 96635443 -23648869 + B4 SINE B4 1 292 0 2 1322 207 0 0 0 chr13 96635865 96635888 -23648424 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1322 494 332 74 77 chr13 96635888 96636346 -23647966 + MLT1H1 LTR MaLR 6 506 -43 2 1322 594 70 93 0 chr13 96636593 96636722 -23647590 + (TCTCTG)n Simple_repeat Simple_repeat 2 142 0 2 1322 537 16 0 0 chr13 96636734 96636796 -23647516 + (TG)n Simple_repeat Simple_repeat 2 63 0 2 1322 273 250 31 15 chr13 96637192 96637322 -23646990 + ORR1B1-int LTR MaLR 623 754 -755 2 1322 972 112 15 0 chr13 96637219 96637353 -23646959 + B1_Mur4 SINE Alu 6 141 -9 2 1322 481 279 49 98 chr13 96637223 96637386 -23646926 + B4 SINE B4 94 248 -44 2 1322 226 275 42 42 chr13 96638578 96638650 -23645662 + MER20 DNA MER1_type 7 78 -141 2 1322 381 129 0 0 chr13 96638678 96638748 -23645564 + (CAAAC)n Simple_repeat Simple_repeat 5 74 0 2 1322 344 203 31 0 chr13 96641325 96641389 -23642923 + RSINE1 SINE B4 87 152 -13 2 1322 216 341 29 73 chr13 96641824 96641960 -23642352 - L4 LINE RTE -108 1921 1792 2 1322 268 259 0 18 chr13 96642463 96642518 -23641794 + ID4_ SINE ID 2 55 -28 2 1322 223 200 22 0 chr13 96642528 96642573 -23641739 + (ATGGTG)n Simple_repeat Simple_repeat 5 50 0 2 1322 462 266 68 12 chr13 96642807 96642984 -23641328 + MIRb SINE MIR 9 205 -63 2 1322 407 253 0 0 chr13 96643003 96643021 -23641291 + PB1D10 SINE Alu 1 87 -30 2 1322 470 159 0 0 chr13 96643021 96643090 -23641222 + ID_B1 SINE B4 100 168 -56 2 1322 195 42 0 0 chr13 96643090 96643114 -23641198 + (CATA)n Simple_repeat Simple_repeat 4 27 0 2 1322 192 77 0 0 chr13 96643115 96643141 -23641171 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2 1322 506 285 25 10 chr13 96643532 96643678 -23640634 + ID_B1 SINE B4 81 223 -69 2 1322 1187 52 68 99 chr13 96644144 96644335 -23639977 - B2_Mm2 SINE B2 -9 186 2 2 1322 223 243 270 0 chr13 96644446 96644520 -23639792 - MIR SINE MIR -109 153 60 2 1322 1150 242 147 48 chr13 96644934 96645376 -23638936 + L1MB3 LINE L1 5583 6068 -115 2 1322 903 83 98 0 chr13 96645535 96645667 -23638645 - B1_Mus1 SINE Alu -1 147 3 2 1322 294 73 0 0 chr13 96645685 96645726 -23638586 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1322 727 199 13 64 chr13 96645726 96645874 -23638438 - B1_Mur1 SINE Alu -6 143 2 2 1322 266 76 14 57 chr13 96646543 96646613 -23637699 + (TTTTTG)n Simple_repeat Simple_repeat 6 72 0 2 1322 1100 36 63 21 chr13 96646613 96646755 -23637557 - B1_Mus1 SINE Alu 0 148 1 2 1322 609 287 80 58 chr13 96646759 96646795 -23637517 - L1M1 LINE L1 -477 5823 5795 2 1322 558 43 0 0 chr13 96646795 96646864 -23637448 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 1322 609 287 80 58 chr13 96646864 96647190 -23637122 - L1M1 LINE L1 -506 5794 5454 2 1322 36 23 0 0 chr13 96647387 96647430 -23636882 + AT_rich Low_complexity Low_complexity 1 43 0 2 1322 975 165 405 3 chr13 96647539 96647838 -23636474 - MTD LTR MaLR 0 419 1 2 1322 287 312 0 10 chr13 96649312 96649409 -23634903 + (CATATA)n Simple_repeat Simple_repeat 1 96 0 2 1322 228 322 0 0 chr13 96649410 96649587 -23634725 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 1322 243 0 0 0 chr13 96650235 96650270 -23634042 + L1Md_T LINE L1 6546 6580 -2 2 1322 909 238 79 95 chr13 96650913 96651261 -23633051 + ORR1E LTR MaLR 6 379 0 2 1322 21 57 0 0 chr13 96651275 96651310 -23633002 + AT_rich Low_complexity Low_complexity 1 35 0 2 1322 229 244 93 39 chr13 96651380 96651466 -23632846 - BC1_Mm scRNA scRNA -65 87 1 2 1322 676 284 113 84 chr13 96651904 96652346 -23631966 + RMER4A LTR ERVK 1 455 -11 2 1322 294 29 0 0 chr13 96653233 96653268 -23631044 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1322 406 286 9 19 chr13 96653442 96653549 -23630763 + PB1D10 SINE Alu 12 117 0 2 1322 230 232 0 0 chr13 96653579 96653635 -23630677 + FAM SINE Alu 260 315 0 2 1322 996 278 68 62 chr13 96653985 96654353 -23629959 - ORR1D2 LTR MaLR 0 370 1 2 1322 301 355 58 19 chr13 96654714 96654869 -23629443 - MER5A DNA MER1_type -24 165 5 2 1322 815 253 13 26 chr13 96655838 96656065 -23628247 - ID_B1 SINE B4 0 224 1 2 1322 197 386 0 0 chr13 96656276 96656346 -23627966 - MIRb SINE MIR -195 73 4 2 1322 253 229 28 14 chr13 96657197 96657268 -23627044 + ID4 SINE ID 3 74 -9 2 1322 390 42 0 0 chr13 96657808 96657856 -23626456 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1322 534 269 117 0 chr13 96657896 96658041 -23626271 - B4 SINE B4 -36 256 95 2 1322 328 88 17 17 chr13 96658043 96658101 -23626211 + (TCC)n Simple_repeat Simple_repeat 3 60 0 2 1322 443 241 0 11 chr13 96658101 96658189 -23626123 - B4 SINE B4 -205 87 1 2 1322 422 286 103 0 chr13 96658200 96658326 -23625986 - B1F SINE Alu 0 149 11 2 1322 315 19 19 37 chr13 96659017 96659071 -23625241 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 2 1322 225 0 0 0 chr13 96659331 96659356 -23624956 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1322 607 243 76 0 chr13 96659490 96659634 -23624678 - RSINE1 SINE B4 -8 157 3 2 1322 612 0 0 0 chr13 96660489 96660557 -23623755 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 1322 468 0 0 0 chr13 96660557 96660608 -23623704 + (GA)n Simple_repeat Simple_repeat 1 52 0 2 1322 282 116 0 0 chr13 96661888 96661931 -23622381 + (CCCG)n Simple_repeat Simple_repeat 4 46 0 2 1322 357 289 48 0 chr13 96662890 96662994 -23621318 - MER5A DNA MER1_type -48 141 33 2 1322 224 225 0 0 chr13 96664123 96664163 -23620149 + polypyrimidine Low_complexity Low_complexity 1 40 0 2 1322 916 78 261 0 chr13 96664163 96664316 -23619996 - B2_Mm2 SINE B2 -1 194 2 2 1322 459 0 0 0 chr13 96664630 96664681 -23619631 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1322 710 211 13 26 chr13 96664684 96664840 -23619472 - RSINE1 SINE B4 -11 154 1 2 1322 471 269 12 13 chr13 96664945 96665063 -23619249 - PB1D10 SINE Alu -24 125 9 2 1322 262 223 47 118 chr13 96664979 96665106 -23619206 + YREP_Mm Unknown Unknown 224 341 -1471 2 1322 25 0 0 0 chr13 96665190 96665215 -23619097 + AT_rich Low_complexity Low_complexity 1 25 0 2 1322 826 258 9 32 chr13 96665597 96665817 -23618495 + B3 SINE B2 2 216 0 2 1322 208 103 0 0 chr13 96666221 96666250 -23618062 - MIR SINE MIR -121 141 113 2 1322 298 250 40 0 chr13 96666831 96666907 -23617405 - ID_B1 SINE B4 -3 221 143 2 1322 995 156 31 0 chr13 96666915 96667075 -23617237 - U1 snRNA snRNA 0 165 1 2 1322 432 0 0 0 chr13 96668451 96668499 -23615813 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1322 423 0 0 0 chr13 96668499 96668545 -23615767 + (GA)n Simple_repeat Simple_repeat 2 48 0 3 1322 329 143 18 0 chr13 96669056 96669112 -23615200 + MTEa LTR MaLR 2 58 -321 3 1322 430 307 21 48 chr13 96669630 96669818 -23614494 + Lx7 LINE L1 7514 7696 0 3 1322 1441 63 26 5 chr13 96671107 96671297 -23613015 - B2_Mm2 SINE B2 0 195 2 3 1322 486 270 9 0 chr13 96671300 96671415 -23612897 - PB1D7 SINE Alu 0 120 5 3 1322 182 74 0 0 chr13 96671487 96671514 -23612798 + L2c LINE L2 3346 3372 -15 3 1322 766 78 17 0 chr13 96672139 96672254 -23612058 + (TC)n Simple_repeat Simple_repeat 1 117 0 3 1322 279 0 0 0 chr13 96672256 96672287 -23612025 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1322 1713 169 150 0 chr13 96672682 96673048 -23611264 + MTC LTR MaLR 1 421 0 3 1322 506 254 17 8 chr13 96673192 96673311 -23611001 + PB1D9 SINE Alu 1 120 0 3 1322 1732 289 79 38 chr13 96673339 96674023 -23610289 + Lx8 LINE L1 6578 7289 -184 3 1322 242 285 0 6 chr13 96675206 96675281 -23609031 + ID2 SINE ID 15 87 -65 3 1322 270 0 0 0 chr13 96675484 96675514 -23608798 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1322 718 113 37 15 chr13 96675532 96675808 -23608504 + (CA)n Simple_repeat Simple_repeat 1 282 0 3 1322 1643 237 18 148 chr13 96675823 96676451 -23607861 - RMER15 LTR ERVL -29 546 1 3 1322 745 196 6 57 chr13 96676751 96676908 -23607404 + B1_Mur3 SINE Alu 1 149 0 3 1322 25 0 0 0 chr13 96677106 96677131 -23607181 + AT_rich Low_complexity Low_complexity 1 25 0 3 1322 990 69 0 0 chr13 96677200 96677331 -23606981 + (ATG)n Simple_repeat Simple_repeat 2 132 0 3 1322 272 333 0 0 chr13 96677346 96677424 -23606888 + ID SINE ID 1 78 -146 3 1322 32 0 0 0 chr13 96677429 96677461 -23606851 + AT_rich Low_complexity Low_complexity 1 32 0 3 1322 263 339 0 17 chr13 96677462 96677579 -23606733 + PB1D10 SINE Alu 1 115 -2 3 1322 806 0 0 11 chr13 96678548 96678643 -23605669 + (GAAA)n Simple_repeat Simple_repeat 4 97 0 3 1322 296 169 41 82 chr13 96678696 96678793 -23605519 + PB1D10 SINE Alu 5 97 -20 3 1322 708 155 11 28 chr13 96678810 96678989 -23605323 + GA-rich Low_complexity Low_complexity 3 178 0 3 1322 547 162 26 39 chr13 96679011 96679242 -23605070 + GA-rich Low_complexity Low_complexity 1 228 0 3 1322 354 241 25 0 chr13 96679861 96679940 -23604372 + PB1D10 SINE Alu 2 82 -35 3 1322 561 76 0 0 chr13 96679941 96680020 -23604292 + (GGGA)n Simple_repeat Simple_repeat 4 82 0 3 1322 293 315 28 9 chr13 96680615 96680724 -23603588 + GA-rich Low_complexity Low_complexity 1 111 0 3 1322 261 284 12 0 chr13 96681590 96681671 -23602641 + ID4 SINE ID 1 82 -1 3 1322 182 37 0 36 chr13 96681675 96681703 -23602609 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1322 995 293 1 9 chr13 96681813 96682096 -23602216 - B4 SINE B4 -2 290 11 3 1322 445 253 93 58 chr13 96683031 96683203 -23601109 - MLT2D LTR ERVL -21 393 216 3 1322 761 290 82 18 chr13 96683226 96683568 -23600744 - MTD LTR MaLR -4 415 9 3 1322 261 197 139 38 chr13 96683588 96683667 -23600645 - MLT2D LTR ERVL -215 199 113 3 1322 248 330 44 0 chr13 96683714 96683805 -23600507 - PB1 SINE Alu 0 127 33 3 1322 8340 47 1 3 chr13 96683821 96685149 -23599163 - L1Md_F2 LINE L1 0 6582 5256 3 1322 458 242 67 0 chr13 96685187 96685307 -23599005 - MLT2D LTR ERVL -284 130 3 3 1322 419 307 0 9 chr13 96685363 96685478 -23598834 - PB1D10 SINE Alu -1 116 3 3 1322 1323 156 0 51 chr13 96685605 96685841 -23598471 + URR1A DNA MER1_type 3 226 0 3 1322 219 254 56 14 chr13 96686333 96686405 -23597907 + PB1D9 SINE Alu 1 75 -45 3 1322 677 247 13 20 chr13 96686408 96686557 -23597755 + B1_Mur2 SINE Alu 1 148 -1 3 1322 190 0 0 62 chr13 96686557 96686589 -23597723 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 3 1322 351 0 0 0 chr13 96686649 96686688 -23597624 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1322 2149 176 31 10 chr13 96686861 96687275 -23597037 - RMER19A LTR ERVK -42 695 273 3 1322 1996 228 77 27 chr13 96687275 96687716 -23596596 + RLTR20B1 LTR ERVK 1 470 -93 3 1322 423 0 0 0 chr13 96687716 96687763 -23596549 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1322 1996 228 77 27 chr13 96687763 96687843 -23596469 + RLTR20B1 LTR ERVK 471 547 -16 3 1322 1199 117 193 0 chr13 96687875 96688098 -23596214 - RMER19A LTR ERVK -471 266 1 3 1322 248 346 25 0 chr13 96688977 96689058 -23595254 - BC1_Mm scRNA scRNA -61 91 9 3 1322 534 237 45 8 chr13 96689073 96689205 -23595107 - B1F1 SINE Alu -6 143 7 3 1322 1156 68 14 0 chr13 96689248 96689394 -23594918 - B1_Mus1 SINE Alu 0 148 1 3 1322 181 179 69 35 chr13 96689842 96689900 -23594412 - MIR SINE MIR -29 233 174 3 1322 1227 228 91 26 chr13 96690048 96690390 -23593922 + ORR1D1 LTR MaLR 1 364 -10 3 1322 326 203 43 0 chr13 96690560 96690629 -23593683 - B1F SINE Alu -5 144 73 3 1322 1630 182 73 25 chr13 96690935 96691291 -23593021 - ORR1D1 LTR MaLR 0 374 2 3 1322 292 162 43 14 chr13 96691715 96691784 -23592528 - RMER15 LTR ERVL -100 475 405 3 1322 370 314 0 0 chr13 96692133 96692238 -23592074 + PB1D10 SINE Alu 3 107 -10 3 1322 216 0 0 0 chr13 96692480 96692504 -23591808 + (TGGGGG)n Simple_repeat Simple_repeat 6 29 0 3 1322 505 293 8 0 chr13 96692863 96692996 -23591316 + B1F2 SINE Alu 1 134 -15 3 1322 711 0 0 0 chr13 96693025 96693104 -23591208 + (GA)n Simple_repeat Simple_repeat 2 80 0 3 1322 248 354 46 20 chr13 96693130 96693326 -23590986 + L2a LINE L2 3196 3396 -30 3 1322 2211 130 3 0 chr13 96693344 96693668 -23590644 + ORR1A2 LTR MaLR 1 325 -2 3 1322 467 216 45 0 chr13 96694841 96694952 -23589360 - PB1D9 SINE Alu -2 118 3 3 1322 647 253 33 0 chr13 96696239 96696389 -23587923 + B3A SINE B2 2 156 -42 3 1322 658 148 24 32 chr13 96696381 96696507 -23587805 - B1_Mur2 SINE Alu -24 125 1 3 1322 225 167 104 0 chr13 96696704 96696752 -23587560 + PB1 SINE Alu 67 119 -8 3 1322 2670 156 66 6 chr13 96696886 96697383 -23586929 - RLTR11A2 LTR ERVK 0 527 1 3 1322 357 250 11 0 chr13 96697383 96697471 -23586841 - PB1 SINE Alu -19 108 20 3 1322 231 114 0 0 chr13 96697815 96697850 -23586462 + (GGA)n Simple_repeat Simple_repeat 3 37 0 3 1322 414 292 186 7 chr13 96698036 96698181 -23586131 + B4A SINE B4 116 286 -6 3 1322 30 105 0 0 chr13 96698342 96698456 -23585856 + AT_rich Low_complexity Low_complexity 1 114 0 3 1322 692 189 17 0 chr13 96698460 96698640 -23585672 - RCHARR1 DNA MER1_type -66 908 726 3 1322 1610 155 2 234 chr13 96698640 96699136 -23585176 + L1Md_F LINE L1 83 463 -6056 3 1322 28922 44 3 0 chr13 96699139 96702641 -23581671 + L1Md_F2 LINE L1 2076 5586 -297 3 1322 8080 42 12 11 chr13 96702641 96703636 -23580676 + L1Md_F2 LINE L1 5587 6582 0 3 1322 1085 264 26 4 chr13 96703651 96703917 -23580395 + B4A SINE B4 15 286 -6 3 1322 643 239 77 28 chr13 96703916 96704033 -23580279 - RCHARR1 DNA MER1_type -235 739 613 3 1322 2800 66 141 139 chr13 96704033 96704544 -23579768 - RLTR1B LTR ERV1 0 512 1 3 1322 643 239 77 28 chr13 96704544 96704607 -23579705 - RCHARR1 DNA MER1_type -362 612 550 3 1322 309 248 70 79 chr13 96704733 96704983 -23579329 - RLTR15 LTR ERVK -91 268 48 3 1322 1526 271 66 16 chr13 96705031 96705545 -23578767 - RCHARR1 DNA MER1_type -420 554 15 3 1322 2120 224 29 25 chr13 96705948 96706466 -23577846 - RLTR20C LTR ERVK -14 520 1 3 1322 1171 75 0 0 chr13 96706629 96706776 -23577536 - B1_Mm SINE Alu 0 147 1 3 1322 410 299 154 26 chr13 96706824 96707168 -23577144 - L2a LINE L2 0 3426 3039 3 1322 1580 230 51 101 chr13 96707285 96707638 -23576674 + Lx6 LINE L1 6945 7258 -202 3 1322 1204 55 0 0 chr13 96707638 96707783 -23576529 - B1_Mus2 SINE Alu -2 145 1 3 1322 1580 230 51 101 chr13 96707783 96707923 -23576389 + Lx6 LINE L1 7259 7413 -47 3 1322 24 0 0 0 chr13 96707923 96707947 -23576365 + AT_rich Low_complexity Low_complexity 1 24 0 3 1322 1252 114 49 0 chr13 96707957 96708141 -23576171 - B2_Mm2 SINE B2 -2 193 1 3 1322 946 161 166 0 chr13 96708326 96708519 -23575793 + URR1B DNA MER1_type 1 225 0 3 1322 282 320 102 10 chr13 96708564 96708662 -23575650 - PB1D10 SINE Alu -10 107 1 3 1322 342 300 67 0 chr13 96709580 96709700 -23574612 + B4 SINE B4 77 204 -88 3 1322 746 138 8 0 chr13 96709599 96709722 -23574590 + B1_Mm SINE Alu 12 135 -12 3 1322 276 30 0 0 chr13 96709725 96709758 -23574554 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1322 216 0 0 0 chr13 96709758 96709782 -23574530 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 3 1322 337 294 23 70 chr13 96710038 96710166 -23574146 + B1F2 SINE Alu 28 149 0 3 1322 383 229 40 72 chr13 96710311 96710427 -23573885 + PB1 SINE Alu 1 127 0 3 1322 323 219 204 20 chr13 96710814 96710912 -23573400 - PB1D10 SINE Alu -1 116 1 3 1322 212 265 13 128 chr13 96711091 96711169 -23573143 + ID4 SINE ID 2 70 -13 3 1322 759 150 0 0 chr13 96711175 96711475 -23572837 + (CA)n Simple_repeat Simple_repeat 1 300 0 3 1322 350 131 70 28 chr13 96711475 96711546 -23572766 + HAL1-3A_ME LINE L1 1976 2049 -809 3 1322 225 278 19 0 chr13 96711785 96711839 -23572473 - BC1_Mm scRNA scRNA -81 71 17 3 1322 219 69 0 0 chr13 96711843 96711872 -23572440 + (CATCC)n Simple_repeat Simple_repeat 3 31 0 3 1322 314 305 144 36 chr13 96711890 96712084 -23572228 + LTR31 LTR ERV1 76 290 -329 3 1322 594 0 0 0 chr13 96712421 96712487 -23571825 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1322 462 36 0 0 chr13 96712487 96712542 -23571770 + (CA)n Simple_repeat Simple_repeat 1 56 0 3 1322 364 258 52 0 chr13 96712811 96712908 -23571404 + PB1D10 SINE Alu 9 110 -7 3 1322 298 161 145 0 chr13 96712912 96712974 -23571338 + ID4_ SINE ID 2 72 -11 3 1322 364 289 35 21 chr13 96713065 96713210 -23571102 - B1F SINE Alu -2 147 1 3 1322 561 297 112 42 chr13 96714206 96714278 -23570034 + MER63D DNA AcHobo 37 110 -951 3 1322 1337 102 11 0 chr13 96714278 96714464 -23569848 + B2_Mm1t SINE B2 2 189 -4 4 1322 561 297 112 42 chr13 96714464 96714704 -23569608 + MER63D DNA AcHobo 111 371 -690 3 1322 722 189 17 6 chr13 96714985 96715161 -23569151 + GA-rich Low_complexity Low_complexity 3 180 0 4 1322 225 0 0 0 chr13 96715193 96715218 -23569094 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1322 342 279 48 62 chr13 96715554 96715699 -23568613 - B1F1 SINE Alu -6 143 1 4 1322 415 304 65 91 chr13 96715813 96716153 -23568159 - ORR1E LTR MaLR -19 340 10 4 1322 270 56 0 0 chr13 96716220 96716256 -23568056 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1322 228 262 89 106 chr13 96716381 96716439 -23567873 + L1M5 LINE L1 4982 5029 -1117 4 1322 1039 105 108 70 chr13 96716439 96716624 -23567688 + B2_Mm2 SINE B2 2 193 -2 4 1322 228 262 89 106 chr13 96716624 96716744 -23567568 + L1M5 LINE L1 5030 5157 -989 4 1322 401 95 16 0 chr13 96716751 96716814 -23567498 + (TG)n Simple_repeat Simple_repeat 2 65 0 4 1322 1684 156 15 18 chr13 96716843 96717182 -23567130 - RLTR15 LTR ERVK -18 341 4 4 1322 225 278 56 0 chr13 96717184 96717238 -23567074 - ID4 SINE ID -18 65 9 4 1322 986 205 117 42 chr13 96717308 96717573 -23566739 + B4A SINE B4 2 286 -6 4 1322 22 0 0 0 chr13 96717700 96717722 -23566590 + AT_rich Low_complexity Low_complexity 1 22 0 4 1322 267 31 0 0 chr13 96718135 96718167 -23566145 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1322 259 315 21 23 chr13 96718302 96718420 -23565892 - B1F SINE Alu -3 117 1 4 1322 224 250 47 0 chr13 96718943 96719007 -23565305 - B1F SINE Alu -82 67 1 4 1322 281 352 129 13 chr13 96719393 96719597 -23564715 - MIRb SINE MIR -9 259 36 4 1322 416 332 58 61 chr13 96719608 96719935 -23564377 + Arthur1 DNA Tip100 11 336 -3611 4 1322 317 292 5 33 chr13 96720037 96720133 -23564179 + PB1D10 SINE Alu 3 100 -49 4 1322 216 0 0 0 chr13 96720141 96720165 -23564147 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1322 386 272 112 4 chr13 96720196 96720447 -23563865 + Arthur1 DNA Tip100 3606 3883 -64 4 1322 299 266 9 48 chr13 96720424 96720549 -23563763 - ID4 SINE ID -31 121 1 4 1322 388 243 64 27 chr13 96722344 96722454 -23561858 + PB1D7 SINE Alu 1 114 -6 4 1322 614 275 49 58 chr13 96722476 96722700 -23561612 + B4A SINE B4 71 292 0 4 1322 844 155 203 0 chr13 96722781 96722968 -23561344 - URR1B DNA MER1_type 0 225 1 4 1322 260 310 126 0 chr13 96723219 96723306 -23561006 + PB1D10 SINE Alu 1 98 -19 4 1322 522 0 0 0 chr13 96723306 96723364 -23560948 + (TTTTA)n Simple_repeat Simple_repeat 2 59 0 4 1322 820 169 7 0 chr13 96723368 96723504 -23560808 - B1_Mur4 SINE Alu -13 137 1 4 1322 405 309 7 67 chr13 96723686 96723821 -23560491 + B3 SINE B2 63 189 -27 4 1322 338 251 127 4 chr13 96724396 96724492 -23559820 - PB1D10 SINE Alu -10 117 5 4 1322 244 286 0 0 chr13 96725449 96725498 -23558814 - ID4 SINE ID -21 62 14 4 1322 840 267 115 34 chr13 96725530 96725825 -23558487 - MER63B DNA AcHobo -1 435 117 4 1322 420 20 0 0 chr13 96726681 96726730 -23557582 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1322 212 187 60 107 chr13 96728944 96729028 -23555284 + L3 LINE CR1 4369 4448 -41 4 1322 303 28 0 0 chr13 96729261 96729297 -23555015 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1322 1106 60 13 0 chr13 96730684 96730834 -23553478 + (GAAA)n Simple_repeat Simple_repeat 1 152 0 4 1323 300 53 0 0 chr13 96732158 96732196 -23552116 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 1323 278 329 0 14 chr13 96732516 96732590 -23551722 - PB1D10 SINE Alu -39 78 6 4 1323 212 351 13 13 chr13 96732526 96732601 -23551711 - ID_B1 SINE B4 -75 149 75 4 1323 225 94 0 0 chr13 96732616 96732648 -23551664 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 4 1323 953 132 107 0 chr13 96732648 96732807 -23551505 - B2_Mm2 SINE B2 -18 177 2 4 1323 554 247 134 102 chr13 96733135 96733366 -23550946 + B4A SINE B4 2 230 -62 4 1323 772 75 25 0 chr13 96733366 96733486 -23550826 + (GGAA)n Simple_repeat Simple_repeat 3 125 0 4 1323 554 247 134 102 chr13 96733486 96733529 -23550783 + B4A SINE B4 231 284 -8 4 1323 651 174 8 0 chr13 96733538 96733799 -23550513 + (CA)n Simple_repeat Simple_repeat 1 263 0 4 1323 213 284 91 39 chr13 96733985 96734062 -23550250 - BC1_Mm scRNA scRNA -57 95 15 4 1323 287 262 16 0 chr13 96734007 96734068 -23550244 - tRNA-Ala-GCY_ tRNA tRNA -11 64 3 4 1323 288 0 0 0 chr13 96734644 96734676 -23549636 + (CAA)n Simple_repeat Simple_repeat 2 33 0 4 1323 462 263 6 50 chr13 96735009 96735169 -23549143 - L1MC1 LINE L1 -200 6133 5981 4 1323 1117 171 23 28 chr13 96736256 96736473 -23547839 - B3 SINE B2 0 216 1 4 1323 253 392 22 30 chr13 96736926 96737060 -23547252 - Tigger16b DNA Tigger -1 336 204 4 1323 399 261 11 0 chr13 96737237 96737329 -23546983 - PB1D10 SINE Alu -23 94 2 4 1323 455 276 66 22 chr13 96737778 96737915 -23546397 + B1F2 SINE Alu 3 145 -4 4 1323 4561 137 43 77 chr13 96737959 96738893 -23545419 + RMER17A2 LTR ERVK 5 906 0 4 1323 238 274 69 35 chr13 96738904 96738991 -23545321 - MER5B DNA MER1_type -83 95 6 4 1323 674 72 0 10 chr13 96739171 96739269 -23545043 + (TTTTC)n Simple_repeat Simple_repeat 4 100 0 4 1323 654 107 61 26 chr13 96739650 96739765 -23544547 - PB1D9 SINE Alu -1 119 1 4 1323 258 278 101 20 chr13 96739898 96739997 -23544315 - PB1D10 SINE Alu -1 116 10 4 1323 481 256 88 0 chr13 96741188 96741325 -23542987 - B1F SINE Alu 0 149 1 4 1323 235 326 74 34 chr13 96741396 96741545 -23542767 + MIRb SINE MIR 74 228 -40 4 1323 343 248 103 19 chr13 96741907 96742014 -23542298 - PB1D10 SINE Alu 0 117 2 4 1323 329 315 131 70 chr13 96742278 96742606 -23541706 + LTR82B Low_complexity ERVL 277 624 -206 4 1323 557 219 49 49 chr13 96742733 96742877 -23541435 - B1F SINE Alu -5 144 1 4 1323 192 329 66 78 chr13 96743714 96743958 -23540354 + L2b LINE L2 2917 3157 -218 4 1323 1243 34 0 0 chr13 96744388 96744534 -23539778 + B1_Mm SINE Alu 2 147 0 4 1323 243 125 0 0 chr13 96745247 96745287 -23539025 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1323 283 268 202 69 chr13 96745302 96745562 -23538750 - B4A SINE B4 -18 274 3 4 1323 885 154 0 0 chr13 96747462 96747592 -23536720 + B1_Mur4 SINE Alu 20 149 -1 4 1323 303 305 34 103 chr13 96747469 96747615 -23536697 + B4A SINE B4 111 246 -46 4 1323 751 72 9 9 chr13 96747656 96747768 -23536544 + (TCTA)n Simple_repeat Simple_repeat 2 113 0 4 1323 323 263 13 0 chr13 96748592 96748668 -23535644 - ID4 SINE ID -5 78 2 4 1323 504 0 0 0 chr13 96749300 96749356 -23534956 + (CCAA)n Simple_repeat Simple_repeat 3 58 0 4 1323 409 299 162 47 chr13 96749579 96749785 -23534527 - B4 SINE B4 -11 213 3 4 1323 271 287 159 11 chr13 96749810 96749898 -23534414 - PB1D10 SINE Alu -16 101 1 4 1323 26 50 0 0 chr13 96749912 96749952 -23534360 + AT_rich Low_complexity Low_complexity 1 40 0 4 1323 305 262 179 8 chr13 96750062 96750185 -23534127 - B1F SINE Alu 0 149 6 4 1323 225 239 86 11 chr13 96750381 96750474 -23533838 - L1M2 LINE L1 -385 5912 5813 4 1323 704 137 194 0 chr13 96750500 96750624 -23533688 + B1_Mus1 SINE Alu 1 148 0 4 1323 336 48 81 35 chr13 96750627 96750714 -23533598 + (CAAAC)n Simple_repeat Simple_repeat 2 92 0 4 1323 549 0 0 0 chr13 96750768 96750829 -23533483 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 1323 225 224 0 20 chr13 96752480 96752530 -23531782 + CT-rich Low_complexity Low_complexity 5 53 0 4 1323 861 233 32 37 chr13 96752552 96752770 -23531542 - ID_B1 SINE B4 -1 223 7 4 1323 344 291 141 28 chr13 96752837 96753127 -23531185 + MER33 DNA MER1_type 1 323 -1 4 1323 1396 103 0 5 chr13 96754379 96754574 -23529738 - B2_Mm2 SINE B2 0 195 2 4 1323 342 277 67 83 chr13 96754652 96754801 -23529511 + B2_Mm2 SINE B2 1 155 -40 4 1323 1454 141 83 109 chr13 96754801 96755222 -23529090 + RMER17C LTR ERVK 1 410 0 4 1323 342 277 67 83 chr13 96755222 96755265 -23529047 + B2_Mm2 SINE B2 156 190 -5 4 1323 242 286 0 0 chr13 96755361 96755417 -23528895 + GA-rich Low_complexity Low_complexity 3 58 0 4 1323 240 143 0 0 chr13 96756137 96756179 -23528133 + (TCCC)n Simple_repeat Simple_repeat 1 42 0 4 1323 326 354 0 20 chr13 96756179 96756280 -23528032 - BC1_Mm scRNA scRNA -53 99 1 4 1323 449 230 8 34 chr13 96756286 96756403 -23527909 - PB1D10 SINE Alu 0 117 4 4 1323 286 261 110 6 chr13 96757733 96757837 -23526475 - PB1 SINE Alu -2 125 15 4 1323 198 0 0 0 chr13 96757877 96757899 -23526413 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 4 1323 339 267 9 65 chr13 96758315 96758423 -23525889 + B4A SINE B4 2 103 -189 4 1323 848 217 51 31 chr13 96758819 96759014 -23525298 + MER58A DNA MER1_type 26 224 0 4 1323 363 98 0 0 chr13 96759565 96759626 -23524686 + (C)n Simple_repeat Simple_repeat 1 61 0 4 1323 263 94 123 70 chr13 96760174 96760231 -23524081 - PB1D10 SINE Alu 0 117 58 4 1323 1188 59 0 0 chr13 96760233 96760386 -23523926 + (TCC)n Simple_repeat Simple_repeat 3 155 0 4 1323 1429 239 59 26 chr13 96761926 96762317 -23521995 - MTD LTR MaLR -15 404 1 4 1323 259 278 26 72 chr13 96762318 96762512 -23521800 + MLT1D LTR MaLR 181 365 -140 4 1323 380 335 48 59 chr13 96762649 96762922 -23521390 - ORR1E LTR MaLR -4 355 86 4 1323 558 0 0 0 chr13 96763406 96763468 -23520844 + (CA)n Simple_repeat Simple_repeat 1 62 0 4 1323 418 61 30 0 chr13 96763558 96763624 -23520688 + (TG)n Simple_repeat Simple_repeat 1 68 0 4 1323 396 208 9 114 chr13 96763923 96764037 -23520275 + MT2B LTR ERVL 155 256 -345 5 1323 803 68 3 2 chr13 96763935 96764052 -23520260 + B1_Mus1 SINE Alu 1 118 -2 5 1323 556 239 0 0 chr13 96764139 96764248 -23520064 - PB1D10 SINE Alu -7 110 2 5 1323 235 213 25 74 chr13 96764248 96764329 -23519983 - L1MD LINE L1 -450 5909 5833 5 1323 234 232 146 0 chr13 96764338 96764420 -23519892 - L1MC LINE L1 -2030 5755 5662 5 1323 29 28 0 0 chr13 96764487 96764523 -23519789 + AT_rich Low_complexity Low_complexity 1 36 0 5 1323 327 308 0 0 chr13 96764530 96764595 -23519717 - RSINE1 SINE B4 -68 97 33 5 1323 184 108 0 86 chr13 96765676 96765757 -23518555 + A-rich Low_complexity Low_complexity 3 76 0 5 1323 46 45 0 0 chr13 96766945 96767012 -23517300 + AT_rich Low_complexity Low_complexity 1 67 0 5 1323 624 207 9 0 chr13 96767095 96767211 -23517101 - PB1D9 SINE Alu -2 118 2 5 1323 717 289 45 5 chr13 96767327 96767529 -23516783 + B3 SINE B2 6 215 -1 5 1323 1746 252 22 60 chr13 96767535 96768034 -23516278 + Lx8 LINE L1 6430 6909 -564 5 1323 1149 189 48 0 chr13 96768506 96768712 -23515600 + B3 SINE B2 1 216 0 5 1323 1117 87 0 7 chr13 96768736 96768886 -23515426 + B2_Mm2 SINE B2 2 150 -45 5 1323 258 229 33 0 chr13 96770029 96770090 -23514222 + CT-rich Low_complexity Low_complexity 1 63 0 5 1323 445 269 132 60 chr13 96770090 96770256 -23514056 - B3A SINE B2 -20 178 1 5 1323 413 250 98 0 chr13 96770282 96770394 -23513918 - MER53 DNA hAT -70 123 1 5 1323 550 273 41 64 chr13 96770395 96770567 -23513745 + MER20 DNA MER1_type 32 199 -20 5 1323 738 298 60 81 chr13 96770856 96771344 -23512968 - L1MB3 LINE L1 -127 6052 5576 5 1323 387 192 0 0 chr13 96771539 96771617 -23512695 + (CA)n Simple_repeat Simple_repeat 2 79 0 5 1323 330 333 37 0 chr13 96772098 96772206 -23512106 + B1F SINE Alu 12 123 -26 5 1323 258 103 43 14 chr13 96772289 96772358 -23511954 + A-rich Low_complexity Low_complexity 2 72 0 5 1323 291 104 0 0 chr13 96772947 96772995 -23511317 + (CATA)n Simple_repeat Simple_repeat 1 48 0 5 1323 4326 209 65 34 chr13 96773306 96775165 -23509147 + RMER1A Other Other 1 1015 -15 5 1323 212 56 0 27 chr13 96775167 96775179 -23509133 + (TA)n Simple_repeat Simple_repeat 2 13 0 5 1323 420 20 0 0 chr13 96775179 96775228 -23509084 + (CA)n Simple_repeat Simple_repeat 2 50 0 5 1323 212 56 0 27 chr13 96775228 96775252 -23509060 + (TA)n Simple_repeat Simple_repeat 1 23 0 5 1323 635 307 12 16 chr13 96775574 96775762 -23508550 + B3 SINE B2 9 199 -17 5 1323 1202 41 7 14 chr13 96777013 96777161 -23507151 + B1_Mus2 SINE Alu 1 147 0 5 1323 346 345 13 51 chr13 96778158 96778314 -23505998 - B4 SINE B4 -141 151 2 5 1323 297 0 0 0 chr13 96779112 96779145 -23505167 + (CA)n Simple_repeat Simple_repeat 1 33 0 5 1323 216 0 0 0 chr13 96779876 96779900 -23504412 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1323 454 272 8 0 chr13 96780111 96780236 -23504076 + Charlie5 DNA MER1_type 1 121 -2503 5 1323 231 257 113 13 chr13 96780422 96780572 -23503740 + Charlie5 DNA MER1_type 2352 2516 -108 5 1323 257 135 0 19 chr13 96780612 96780665 -23503647 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1323 252 0 0 0 chr13 96781897 96781925 -23502387 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 5 1323 1126 92 0 22 chr13 96781964 96782142 -23502170 + Lx LINE L1 6472 6645 -9 5 1323 240 35 0 0 chr13 96782226 96782255 -23502057 + (TC)n Simple_repeat Simple_repeat 2 30 0 5 1323 315 185 0 71 chr13 96782374 96782444 -23501868 - L1MA8 LINE L1 -40 6251 6187 5 1323 3834 101 6 2 chr13 96783367 96783904 -23500408 - L1_Mm LINE L1 -1056 4827 4289 5 1323 7539 68 24 2 chr13 96783904 96784906 -23499406 + L1_Mus1 LINE L1 5543 6566 -1 5 1323 500 296 98 6 chr13 96786887 96787050 -23497262 - B3A SINE B2 -20 178 1 5 1323 452 296 178 4 chr13 96788641 96788899 -23495413 + MLT1B LTR MaLR 1 303 -87 5 1323 2039 145 9 3 chr13 96788907 96789246 -23495066 - L1_Mur2 LINE L1 -1715 4162 3822 5 1323 8814 136 29 5 chr13 96789245 96791541 -23492771 + Lx2 LINE L1 4638 6994 -3 5 1323 1131 124 22 28 chr13 96791541 96791723 -23492589 - B2_Mm2 SINE B2 -14 181 1 5 1323 249 128 0 0 chr13 96792379 96792418 -23491894 + B3 SINE B2 2 40 -176 5 1323 345 247 25 0 chr13 96792803 96792884 -23491428 - ID4_ SINE ID 0 83 1 5 1323 371 280 64 0 chr13 96792904 96793029 -23491283 - B1F SINE Alu -7 142 10 5 1323 2137 133 12 12 chr13 96793082 96793409 -23490903 - ORR1A2 LTR MaLR 0 327 1 5 1323 307 261 24 21 chr13 96794195 96794343 -23489969 + L1M2 LINE L1 5439 5596 -704 5 1323 452 284 83 28 chr13 96794351 96794496 -23489816 + RSINE1 SINE B4 13 165 0 5 1323 355 259 78 11 chr13 96794672 96794762 -23489550 + RSINE1 SINE B4 1 96 -69 5 1323 249 222 19 0 chr13 96795205 96795259 -23489053 - B1F1 SINE Alu -11 138 84 5 1323 456 19 0 0 chr13 96795675 96795728 -23488584 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1323 414 0 0 0 chr13 96796067 96796113 -23488199 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1323 376 266 0 11 chr13 96796117 96796212 -23488100 - RSINE1 SINE B4 -19 146 53 5 1323 464 143 149 74 chr13 96796540 96796646 -23487666 - B1_Mus1 SINE Alu -13 135 18 5 1323 4859 48 5 2 chr13 96796646 96797231 -23487081 + LTRIS_Mus LTR ERV1 1 587 0 5 1323 464 143 149 74 chr13 96797231 96797245 -23487067 - B1_Mus1 SINE Alu -131 17 6 5 1323 237 256 0 34 chr13 96797946 96798035 -23486277 + GA-rich Low_complexity Low_complexity 2 87 0 5 1323 772 198 38 114 chr13 96798119 96798330 -23485982 - B3A SINE B2 -1 197 3 5 1323 358 223 2 49 chr13 96798926 96799028 -23485284 - ID4_ SINE ID -46 106 8 5 1323 182 91 0 29 chr13 96799119 96799153 -23485159 + (AGGGGG)n Simple_repeat Simple_repeat 4 36 0 5 1323 282 325 153 8 chr13 96799679 96799803 -23484509 + MER21B LTR ERV1 28 169 -694 5 1323 835 270 123 12 chr13 96799915 96800249 -23484063 + MER21B LTR ERV1 363 733 -130 5 1323 417 20 0 0 chr13 96801286 96801336 -23482976 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1323 620 253 37 49 chr13 96801339 96801501 -23482811 - B3A SINE B2 -38 160 1 5 1323 687 46 0 0 chr13 96802353 96802440 -23481872 + (TCCC)n Simple_repeat Simple_repeat 4 90 0 5 1323 24497 141 16 22 chr13 96802440 96802602 -23481710 - L1VL4 LINE L1 -429 5454 5293 5 1323 1193 56 0 0 chr13 96802602 96802744 -23481568 - B1_Mm SINE Alu -5 142 1 5 1323 24497 141 16 22 chr13 96802744 96804820 -23479492 - L1VL4 LINE L1 -591 5292 3280 5 1323 1055 77 28 7 chr13 96804820 96804964 -23479348 - B1_Mus1 SINE Alu 0 148 2 5 1323 24497 140 23 19 chr13 96804964 96807451 -23476861 - L1VL4 LINE L1 -2604 3279 735 5 1323 374 302 17 11 chr13 96807524 96807705 -23476607 - L1VL4 LINE L1 -5905 752 571 5 1323 546 57 0 0 chr13 96807738 96807808 -23476504 + (TCCC)n Simple_repeat Simple_repeat 4 73 0 5 1323 387 225 0 12 chr13 96807811 96807892 -23476420 - ID4 SINE ID -3 80 1 5 1323 360 94 0 0 chr13 96808360 96808413 -23475899 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1323 225 0 0 0 chr13 96808413 96808437 -23475875 + (GA)n Simple_repeat Simple_repeat 1 25 0 5 1323 220 271 0 79 chr13 96808636 96808712 -23475600 - RSINE1 SINE B4 -95 70 1 5 1323 1241 61 0 0 chr13 96809084 96809231 -23475081 + B1_Mus2 SINE Alu 1 147 0 5 1323 893 64 8 0 chr13 96810070 96810195 -23474117 + (GAAA)n Simple_repeat Simple_repeat 4 129 0 5 1323 1047 204 3 113 chr13 96810280 96810589 -23473723 + RMER19B LTR ERVK 4 278 -333 5 1323 1134 228 94 42 chr13 96810613 96811039 -23473273 + RMER19B LTR ERVK 454 901 -1 5 1323 393 270 63 137 chr13 96811049 96811444 -23472868 + L1MA4A LINE L1 5560 5925 -378 5 1323 216 0 0 0 chr13 96811774 96811798 -23472514 + (GTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1323 522 312 6 6 chr13 96811835 96812012 -23472300 + MER20 DNA MER1_type 39 215 -4 5 1323 805 179 0 0 chr13 96813084 96813201 -23471111 - Lx9 LINE L1 -53 7420 7327 5 1323 609 14 0 0 chr13 96813201 96813271 -23471041 + (TC)n Simple_repeat Simple_repeat 1 70 0 5 1323 2856 175 64 4 chr13 96813271 96813822 -23470490 - Lx9 LINE L1 -189 7455 6729 5 1323 638 123 96 9 chr13 96813962 96814077 -23470235 - ORR1D1 LTR MaLR -249 125 1 5 1323 1082 225 45 19 chr13 96814149 96814416 -23469896 + B4A SINE B4 1 274 -18 5 1323 258 32 0 0 chr13 96814727 96814758 -23469554 + (CAAT)n Simple_repeat Simple_repeat 3 33 0 5 1323 417 319 38 52 chr13 96814832 96815075 -23469237 + MIR SINE MIR 1 244 -24 5 1323 239 314 9 73 chr13 96816063 96816173 -23468139 + PB1D10 SINE Alu 2 104 -13 5 1323 474 18 0 0 chr13 96816690 96816745 -23467567 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 5 1323 794 296 63 13 chr13 96816766 96817081 -23467231 - ERVL-B4-int LTR ERVL -3842 1872 1542 5 1323 315 0 0 0 chr13 96817087 96817122 -23467190 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1323 1397 84 16 16 chr13 96818002 96818196 -23466116 - B2_Mm2 SINE B2 -1 194 1 5 1323 472 95 24 0 chr13 96819497 96819581 -23464731 + (TCTA)n Simple_repeat Simple_repeat 3 88 0 5 1323 186 71 0 0 chr13 96819590 96819618 -23464694 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 5 1323 274 284 112 60 chr13 96819619 96819735 -23464577 - B1F SINE Alu -15 134 13 5 1323 495 183 70 78 chr13 96820157 96820299 -23464013 - RMER10B LTR ERVL 0 398 258 5 1323 833 104 0 36 chr13 96820803 96820943 -23463369 + B1_Mus1 SINE Alu 12 146 -2 5 1323 1622 226 101 43 chr13 96821783 96822319 -23461993 + RMER2 LTR ERV1 1 567 0 5 1323 428 208 208 0 chr13 96822417 96822523 -23461789 + B1_Mus2 SINE Alu 3 130 -17 5 1323 261 0 0 0 chr13 96823237 96823266 -23461046 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5 1323 875 83 0 0 chr13 96823266 96823386 -23460926 - B1_Mm SINE Alu -10 137 18 5 1323 694 328 52 65 chr13 96823644 96824088 -23460224 + MER31B LTR ERV1 2 439 -27 6 1323 372 255 10 58 chr13 96825512 96825616 -23458696 + PB1D10 SINE Alu 13 111 -6 6 1323 428 268 68 45 chr13 96825796 96825972 -23458340 + MIR SINE MIR 17 196 -66 6 1323 266 320 0 0 chr13 96826397 96826475 -23457837 - ID4_ SINE ID -5 78 1 6 1323 3252 132 69 24 chr13 96827129 96827679 -23456633 - RMER15 LTR ERVL 0 575 1 6 1323 344 255 160 20 chr13 96827693 96827793 -23456519 + PB1D10 SINE Alu 4 117 0 6 1323 2080 166 46 34 chr13 96828045 96828483 -23455829 - RMER20A LTR ERVK -73 443 1 6 1323 1238 223 81 0 chr13 96830476 96830749 -23453563 - Lx9 LINE L1 -860 6784 6490 6 1323 291 342 66 20 chr13 96830897 96831094 -23453218 + Charlie18a DNA MER1_type 2 207 -135 6 1323 321 370 106 35 chr13 96831378 96831605 -23452707 + MLT1G LTR MaLR 53 295 -260 6 1323 283 218 21 72 chr13 96832027 96832132 -23452180 - PB1D7 SINE Alu -15 102 3 6 1323 239 282 36 108 chr13 96834116 96834153 -23450159 + MT2B LTR ERVL 130 156 -445 6 1323 434 260 19 14 chr13 96834153 96834299 -23450013 + PB1D10 SINE Alu 1 148 -1 6 1323 288 260 12 61 chr13 96834318 96834400 -23449912 + ID4_ SINE ID 3 80 -3 6 1323 765 249 48 14 chr13 96834575 96834783 -23449529 + ORR1D1 LTR MaLR 1 215 -159 6 1323 830 140 60 7 chr13 96834769 96834920 -23449392 + RMER19B LTR ERVK 717 875 -27 6 1323 481 152 9 57 chr13 96834934 96835039 -23449273 + ORR1D1 LTR MaLR 271 370 0 6 1323 1350 140 89 0 chr13 96835350 96835585 -23448727 + MTC LTR MaLR 1 256 -165 6 1323 2275 171 38 9 chr13 96835584 96836186 -23448126 - RMER19B LTR ERVK -7 895 3 6 1323 873 143 68 6 chr13 96836187 96836349 -23447963 + MTC LTR MaLR 242 413 -8 6 1323 305 310 34 40 chr13 96837008 96837156 -23447156 - L1M4 LINE L1 -1501 4645 4499 6 1323 2108 134 31 3 chr13 96837350 96837702 -23446610 + ORR1B1 LTR MaLR 25 386 -8 6 1323 509 230 9 9 chr13 96838042 96838156 -23446156 + B3A SINE B2 2 115 -83 6 1323 210 208 0 20 chr13 96838146 96838195 -23446117 + B3A SINE B2 68 115 -83 6 1323 239 188 0 20 chr13 96838185 96838234 -23446078 + B3A SINE B2 68 115 -83 6 1323 349 195 39 0 chr13 96838224 96838301 -23446011 + B3A SINE B2 68 147 -51 6 1323 396 0 0 0 chr13 96838301 96838345 -23445967 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1323 442 300 80 25 chr13 96838480 96838719 -23445593 - L1M4 LINE L1 -1490 4656 4405 6 1323 231 153 0 63 chr13 96838722 96838785 -23445527 - B2_Mm1t SINE B2 -9 184 126 6 1323 618 146 0 0 chr13 96839121 96839231 -23445081 + (TC)n Simple_repeat Simple_repeat 1 110 0 6 1323 249 268 11 68 chr13 96839231 96839319 -23444993 + MLT1B LTR MaLR 303 385 -5 6 1323 231 36 0 0 chr13 96839858 96839886 -23444426 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1323 202 216 0 0 chr13 96839919 96839970 -23444342 + T-rich Low_complexity Low_complexity 1 51 0 6 1323 490 246 36 7 chr13 96839971 96840110 -23444202 - B1_Mus1 SINE Alu 0 148 6 6 1323 320 119 17 0 chr13 96840115 96840174 -23444138 + Lx9 LINE L1 7537 7596 -48 6 1323 2517 111 17 70 chr13 96840505 96840921 -23443391 + ORR1B1 LTR MaLR 1 394 0 6 1323 568 296 104 11 chr13 96841568 96841855 -23442457 - Lx8 LINE L1 -6 7467 7154 6 1323 272 268 22 86 chr13 96842976 96843115 -23441197 + MER53 DNA hAT 36 165 -28 6 1323 441 0 0 0 chr13 96844550 96844599 -23439713 + (TC)n Simple_repeat Simple_repeat 2 50 0 6 1323 295 159 130 0 chr13 96844774 96844843 -23439469 - PB1D10 SINE Alu 0 117 40 6 1323 181 317 0 16 chr13 96846232 96846293 -23438019 + MIRm SINE MIR 216 275 -1 6 1323 791 230 6 11 chr13 96846333 96846509 -23437803 + B3A SINE B2 3 177 -21 6 1323 898 304 42 4 chr13 96846660 96846921 -23437391 - Lx8 LINE L1 -243 7230 6960 6 1323 11077 108 10 3 chr13 96847071 96847328 -23436984 - L1_Mm LINE L1 -174 5709 5452 6 1323 3710 41 13 11 chr13 96847328 96847793 -23436519 - L1Md_F2 LINE L1 -3 6579 6114 6 1323 11077 108 10 3 chr13 96847793 96848003 -23436309 - L1_Mm LINE L1 -432 5451 5244 6 1323 270 81 0 0 chr13 96848003 96848040 -23436272 + (TA)n Simple_repeat Simple_repeat 2 38 0 6 1323 11077 108 10 3 chr13 96848040 96849172 -23435140 - L1_Mm LINE L1 -640 5243 4099 6 1323 186 167 0 0 chr13 96850491 96850527 -23433785 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1323 3450 166 101 2 chr13 96851327 96851972 -23432340 + Lx LINE L1 5706 6414 -240 6 1323 313 367 0 0 chr13 96852657 96852807 -23431505 + (TGG)n Simple_repeat Simple_repeat 1 150 0 6 1323 3543 102 48 16 chr13 96852855 96853413 -23430899 + RLTR19-int LTR ERVK 1429 2004 -4133 6 1323 1648 86 36 16 chr13 96853759 96854076 -23430236 + L1_Mus3 LINE L1 6370 6638 0 6 1323 387 0 0 0 chr13 96855156 96855199 -23429113 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 1323 309 82 0 0 chr13 96855199 96855247 -23429065 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1323 21 36 0 0 chr13 96856726 96856754 -23427558 + AT_rich Low_complexity Low_complexity 1 28 0 6 1323 27 29 0 0 chr13 96857107 96857141 -23427171 + AT_rich Low_complexity Low_complexity 1 34 0 6 1323 385 179 0 0 chr13 96857396 96857463 -23426849 - ID4 SINE ID -16 67 1 6 1323 234 248 57 47 chr13 96857763 96857869 -23426443 + L1ME2z LINE L1 6335 6441 -3 6 1323 1025 144 117 56 chr13 96857885 96858098 -23426214 - URR1A DNA MER1_type 0 226 1 6 1323 194 0 39 0 chr13 96859057 96859083 -23425229 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1323 188 0 0 69 chr13 96859241 96859270 -23425042 + (TTTTTG)n Simple_repeat Simple_repeat 5 31 0 6 1323 399 341 45 22 chr13 96859652 96859919 -23424393 + B4A SINE B4 2 274 -18 6 1323 356 111 16 0 chr13 96859944 96860007 -23424305 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 1323 216 368 99 33 chr13 96860057 96860268 -23424044 - MIR SINE MIR -22 240 16 6 1323 423 0 0 0 chr13 96861452 96861499 -23422813 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1323 297 109 0 0 chr13 96861612 96861658 -23422654 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1323 513 0 0 0 chr13 96861664 96861721 -23422591 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 6 165 3223 19 0 48 chr13 96862096 96862491 -23421821 + L1Md_F2 LINE L1 6194 6569 -13 6 1324 24 0 0 0 chr13 96862771 96862795 -23421517 + AT_rich Low_complexity Low_complexity 1 24 0 6 1324 237 167 164 14 chr13 96862797 96862870 -23421442 - Lx8 LINE L1 -10 7463 7380 6 1324 22 0 0 0 chr13 96862926 96862948 -23421364 + AT_rich Low_complexity Low_complexity 1 22 0 6 1324 291 314 29 0 chr13 96863488 96863593 -23420719 + Charlie1 DNA MER1_type 118 225 -2556 6 1324 210 139 0 0 chr13 96864072 96864108 -23420204 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 1324 310 271 93 9 chr13 96864701 96864809 -23419503 + MLT1C LTR MaLR 351 467 0 6 1324 198 319 31 41 chr13 96866409 96866507 -23417805 - L2a LINE L2 -18 3408 3312 6 1324 807 49 49 0 chr13 96867771 96867913 -23416399 - RMER17B LTR ERVK -498 460 312 6 1324 3040 126 2 15 chr13 96867972 96868438 -23415874 + RMER6B LTR ERVK 2 461 0 6 1324 771 50 0 0 chr13 96869692 96869792 -23414520 + (TC)n Simple_repeat Simple_repeat 1 100 0 6 1324 231 170 0 0 chr13 96869797 96869844 -23414468 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1324 1272 20 7 0 chr13 96870277 96870423 -23413889 - B1_Mm SINE Alu 0 147 1 6 1324 257 314 168 27 chr13 96871165 96871441 -23412871 + L2a LINE L2 2750 3086 -340 6 1324 396 0 0 0 chr13 96871531 96871575 -23412737 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 6 1324 433 334 109 3 chr13 96871921 96872233 -23412079 - MLT1C LTR MaLR -120 347 3 6 1324 473 153 24 0 chr13 96872363 96872448 -23411864 + B3A SINE B2 25 111 -87 6 1324 243 0 0 0 chr13 96872520 96872547 -23411765 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1324 2269 153 70 10 chr13 96873163 96873560 -23410752 - MTC LTR MaLR 0 421 1 6 1324 26 23 0 23 chr13 96874093 96874112 -23410200 + AT_rich Low_complexity Low_complexity 1 19 0 6 1324 736 215 21 0 chr13 96874112 96874256 -23410056 + B1F2 SINE Alu 1 147 -2 6 1324 26 23 0 23 chr13 96874256 96874280 -23410032 + AT_rich Low_complexity Low_complexity 1 24 0 6 1324 21 0 0 0 chr13 96874397 96874418 -23409894 + AT_rich Low_complexity Low_complexity 1 21 0 6 1324 423 243 29 0 chr13 96874418 96874521 -23409791 - U6 snRNA snRNA -1 106 1 6 1324 298 330 207 34 chr13 96875277 96875663 -23408649 - L2 LINE L2 -400 3019 2567 6 1324 250 224 0 33 chr13 96875842 96875902 -23408410 + GA-rich Low_complexity Low_complexity 4 61 0 6 1324 248 329 31 50 chr13 96876123 96876283 -23408029 - LTR50 LTR ERVL -124 671 515 6 1324 626 321 155 27 chr13 96876402 96876766 -23407546 - MLT1C LTR MaLR -4 463 53 6 1324 470 252 158 0 chr13 96876921 96877123 -23407189 - LTR50 LTR ERVL -560 235 2 6 1324 3246 50 12 0 chr13 96877764 96878165 -23406147 + L1_Mus1 LINE L1 6162 6567 0 6 1324 434 159 11 0 chr13 96878836 96878924 -23405388 + (TG)n Simple_repeat Simple_repeat 1 89 0 6 1324 397 247 11 11 chr13 96878971 96879061 -23405251 + RSINE1 SINE B4 44 133 -32 6 1324 469 194 0 61 chr13 96879097 96879196 -23405116 - B1_Mur2 SINE Alu 0 149 57 6 1324 492 236 9 0 chr13 96879191 96879297 -23405015 - B1_Mur2 SINE Alu -41 108 2 6 1324 715 268 13 0 chr13 96879313 96879470 -23404842 - B3 SINE B2 -12 204 46 6 1324 772 327 10 91 chr13 96879590 96879899 -23404413 - B4A SINE B4 -6 286 3 6 1324 245 360 36 9 chr13 96879960 96880072 -23404240 + B1_Mur3 SINE Alu 26 140 -9 6 1324 417 261 57 42 chr13 96880085 96880277 -23404035 - L1MC LINE L1 -2406 3740 3546 7 1324 961 123 146 10 chr13 96882295 96882500 -23401812 + Lx9 LINE L1 7404 7636 -8 7 1324 477 268 105 7 chr13 96883570 96883713 -23400599 + MER20 DNA MER1_type 63 219 0 7 1324 396 293 32 0 chr13 96883967 96884090 -23400222 - B1F SINE Alu -22 127 1 7 1324 1145 174 61 0 chr13 96886111 96886324 -23397988 + URR1A DNA MER1_type 1 226 0 7 1324 335 196 32 11 chr13 96886482 96886575 -23397737 - L1ME2z LINE L1 -132 6312 6218 7 1324 492 252 8 16 chr13 96886762 96886883 -23397429 + ID_B1 SINE B4 78 197 -27 7 1324 3370 28 13 3 chr13 96887394 96887786 -23396526 + MTA_Mm LTR MaLR 1 396 0 7 1324 357 311 0 54 chr13 96887856 96887968 -23396344 - PB1D10 SINE Alu -11 106 1 7 1324 280 191 19 130 chr13 96888363 96888471 -23395841 - MLT2B1 LTR ERVL -22 545 450 7 1324 431 283 23 25 chr13 96888576 96888755 -23395557 - MLT2B4 LTR ERVL -214 200 24 7 1324 1855 179 104 27 chr13 96888742 96888791 -23395521 - RLTR20B2 LTR ERVK -41 519 470 7 1324 414 0 0 0 chr13 96888791 96888837 -23395475 + (CA)n Simple_repeat Simple_repeat 1 46 0 7 1324 1855 179 104 27 chr13 96888837 96889269 -23395043 - RLTR20B2 LTR ERVK -91 469 1 7 1324 667 322 51 18 chr13 96889642 96890094 -23394218 + L1M4 LINE L1 3913 4379 -1767 7 1324 409 229 154 31 chr13 96890104 96890266 -23394046 + L1MC LINE L1 4521 4702 -1444 7 1324 768 218 18 29 chr13 96890268 96890438 -23393874 - Lx9 LINE L1 -374 7270 7103 7 1324 474 149 19 9 chr13 96890439 96890547 -23393765 + Lx9 LINE L1 7536 7644 0 7 1324 789 268 208 13 chr13 96890560 96890950 -23393362 + L1MC LINE L1 4697 5162 -984 7 1324 854 237 75 15 chr13 96890958 96891159 -23393153 + B3 SINE B2 4 216 0 7 1324 212 152 43 0 chr13 96892565 96892611 -23391701 + CT-rich Low_complexity Low_complexity 4 51 0 7 1324 461 259 78 29 chr13 96892877 96893122 -23391190 + L1MC LINE L1 5168 5447 -897 7 1324 732 186 0 8 chr13 96893486 96893616 -23390696 - Lx9 LINE L1 -582 7062 6934 7 1324 1163 226 26 72 chr13 96893635 96894021 -23390291 - RMER17C LTR ERVK -29 381 14 7 1324 2208 211 42 13 chr13 96894023 96894498 -23389814 - Lx9 LINE L1 -710 6934 6446 7 1324 438 143 0 0 chr13 96894526 96894617 -23389695 + (TC)n Simple_repeat Simple_repeat 1 91 0 7 1324 255 373 37 25 chr13 96894953 96895115 -23389197 + LTR88c LTR Genie? 111 274 -588 7 1324 243 310 14 0 chr13 96895646 96895717 -23388595 + ID4_ SINE ID 1 72 -11 7 1324 253 320 9 64 chr13 96896369 96896479 -23387833 - MER45R DNA Tip100 -1475 106 3 7 1324 516 32 0 0 chr13 96897032 96897094 -23387218 + (TG)n Simple_repeat Simple_repeat 2 63 0 7 1324 282 116 0 0 chr13 96897111 96897154 -23387158 + (TTAG)n Simple_repeat Simple_repeat 4 46 0 7 1324 566 312 101 0 chr13 96897154 96897391 -23386921 - B4A SINE B4 -31 261 1 7 1324 476 286 87 23 chr13 96897745 96897957 -23386355 + B4A SINE B4 53 279 -13 7 1324 361 103 29 0 chr13 96897960 96898028 -23386284 + (CA)n Simple_repeat Simple_repeat 1 70 0 7 1324 1536 282 98 3 chr13 96898041 96898636 -23385676 + L1MB3 LINE L1 5514 6164 -19 7 1324 344 152 0 15 chr13 96898636 96898703 -23385609 + (TA)n Simple_repeat Simple_repeat 2 67 0 7 1324 23 78 0 0 chr13 96898962 96899013 -23385299 + AT_rich Low_complexity Low_complexity 1 51 0 7 1324 22 0 0 0 chr13 96900493 96900515 -23383797 + AT_rich Low_complexity Low_complexity 1 22 0 7 1324 459 0 0 0 chr13 96901592 96901643 -23382669 + (CAT)n Simple_repeat Simple_repeat 1 51 0 7 1324 441 0 0 0 chr13 96901805 96901854 -23382458 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1324 477 0 0 0 chr13 96903236 96903289 -23381023 + (GA)n Simple_repeat Simple_repeat 1 53 0 7 1324 208 0 62 0 chr13 96904440 96904472 -23379840 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1324 190 184 26 0 chr13 96905106 96905144 -23379168 + L2 LINE L2 6 44 -3375 7 1324 236 133 0 16 chr13 96905551 96905612 -23378700 + (TC)n Simple_repeat Simple_repeat 1 60 0 7 1324 680 214 14 14 chr13 96905940 96906087 -23378225 + B1_Mur1 SINE Alu 3 149 0 7 1324 629 194 184 18 chr13 96906543 96906711 -23377601 + Lx5 LINE L1 6855 7050 0 7 1324 26 0 0 0 chr13 96906724 96906750 -23377562 + AT_rich Low_complexity Low_complexity 1 26 0 7 1324 251 28 28 0 chr13 96907321 96907357 -23376955 + (TAA)n Simple_repeat Simple_repeat 1 37 0 7 1324 366 221 0 0 chr13 96907381 96907458 -23376854 + Lx5 LINE L1 6855 6931 -119 7 1324 538 306 164 20 chr13 96908013 96908263 -23376049 - RMER15 LTR ERVL -17 558 273 7 1324 341 308 75 8 chr13 96908756 96908890 -23375422 - B1F1 SINE Alu 0 149 7 7 1324 377 315 21 7 chr13 96908904 96909048 -23375264 + MLT1L LTR MaLR 141 286 -324 7 1324 956 127 6 0 chr13 96909265 96909430 -23374882 + (GGAA)n Simple_repeat Simple_repeat 3 168 0 7 1324 8103 81 2 10 chr13 96912029 96913197 -23371115 + L1_Mus4 LINE L1 5475 6632 -4 7 1324 918 189 6 0 chr13 96914815 96914979 -23369333 - Lx3C LINE L1 -605 6371 6207 7 1324 3388 107 13 5 chr13 96914979 96915578 -23368734 - RLTR13D3 LTR ERVK 0 1114 417 7 1324 2179 115 99 20 chr13 96915580 96915935 -23368377 - RLTR9A2 LTR ERVK 0 383 1 7 1324 363 155 28 14 chr13 96915936 96916008 -23368304 - ETnERV2-int LTR ERVK -3 7403 7331 7 1324 673 268 27 28 chr13 96916219 96916515 -23367797 - ETnERV2-int LTR ERVK -981 6425 6223 7 1324 697 102 9 9 chr13 96916611 96916720 -23367592 - ETnERV2-int LTR ERVK -1230 4176 4068 7 1324 11544 135 28 68 chr13 96916747 96916934 -23367378 - ETnERV2-int LTR ERVK -4191 3215 3037 7 1324 216 0 0 0 chr13 96916934 96916958 -23367354 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1324 1124 52 0 0 chr13 96916963 96917098 -23367214 - B1_Mus2 SINE Alu -12 135 1 7 1324 11544 135 28 68 chr13 96917098 96919136 -23365176 - ETnERV2-int LTR ERVK -4372 3034 1075 7 1324 561 15 0 0 chr13 96919136 96919202 -23365110 + (TC)n Simple_repeat Simple_repeat 1 66 0 7 1324 200 86 29 0 chr13 96919228 96919263 -23365049 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 7 1324 415 299 46 55 chr13 96919263 96919589 -23364723 - ETnERV2-int LTR ERVK -2988 326 4 7 1324 2070 135 97 3 chr13 96919591 96919941 -23364371 - RLTR9A2 LTR ERVK 0 383 1 7 1324 2683 104 30 0 chr13 96919946 96920349 -23363963 - RLTR13D3 LTR ERVK -699 415 1 7 1324 1038 181 30 0 chr13 96920349 96920581 -23363731 - Lx3C LINE L1 -764 6212 5974 7 1324 3804 210 172 25 chr13 96920724 96921721 -23362591 - Lx9 LINE L1 -423 7221 6078 7 1324 374 204 0 10 chr13 96923735 96923834 -23360478 + CT-rich Low_complexity Low_complexity 2 99 0 7 1324 524 317 7 0 chr13 96923950 96924092 -23360220 + RSINE1 SINE B4 3 145 -20 7 1324 444 104 0 0 chr13 96925166 96925233 -23359079 + (TC)n Simple_repeat Simple_repeat 2 68 0 7 1324 6514 145 23 15 chr13 96926218 96927867 -23356445 + L1VL4 LINE L1 1580 3679 -3655 7 1324 805 273 93 34 chr13 96928363 96928555 -23355757 + B4 SINE B4 8 215 -77 7 1324 462 65 0 0 chr13 96928555 96928617 -23355695 + (CCAA)n Simple_repeat Simple_repeat 2 63 0 7 1324 805 273 93 34 chr13 96928617 96928693 -23355619 + B4 SINE B4 216 291 -1 7 1324 339 219 82 58 chr13 96929272 96929446 -23354866 - L1M4c LINE L1 -632 5895 5664 7 1324 642 201 7 27 chr13 96929448 96929596 -23354716 - RMER10B LTR ERVL -48 350 206 7 1324 2644 296 130 17 chr13 96929598 96931367 -23352945 - L1M4c LINE L1 -807 5720 3742 7 1324 906 186 46 15 chr13 96931374 96931571 -23352741 - MTD LTR MaLR -216 203 1 7 1324 385 201 19 5 chr13 96931571 96931655 -23352657 - Lx8 LINE L1 -928 6545 6472 7 1324 1057 221 28 51 chr13 96931733 96931986 -23352326 - Lx8 LINE L1 -984 6489 6243 7 1324 651 331 62 55 chr13 96932015 96932731 -23351581 - L1M4c LINE L1 -3233 3146 2426 7 1324 371 321 78 7 chr13 96932787 96932928 -23351384 - RSINE1 SINE B4 0 165 15 7 1324 2186 186 89 34 chr13 96933117 96933622 -23350690 - Lx9 LINE L1 -1 7643 7111 7 1324 260 302 98 30 chr13 96933740 96934209 -23350103 - L1M4c LINE L1 -2107 2043 1323 7 1324 252 0 0 0 chr13 96934557 96934585 -23349727 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1324 369 0 0 0 chr13 96934585 96934626 -23349686 + (TAG)n Simple_repeat Simple_repeat 2 42 0 7 1324 513 276 0 0 chr13 96934632 96934737 -23349575 - RSINE1 SINE B4 -49 116 12 7 1324 853 265 35 62 chr13 96935594 96935884 -23348428 + RLTR20D LTR ERVK 10 291 -277 7 1324 392 248 97 49 chr13 96935855 96935924 -23348388 + RLTR20D LTR ERVK 411 480 -98 7 1324 423 0 0 0 chr13 96935924 96935971 -23348341 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1324 392 248 97 49 chr13 96935971 96936045 -23348267 + RLTR20D LTR ERVK 481 561 -17 7 1324 231 250 165 29 chr13 96936100 96936128 -23348184 + RLTR20A2 LTR ERVK 450 479 -99 7 1324 423 0 0 0 chr13 96936128 96936175 -23348137 + (TG)n Simple_repeat Simple_repeat 1 47 0 7 1324 231 250 165 29 chr13 96936175 96936249 -23348063 + RLTR20A2 LTR ERVK 480 566 -12 7 1324 745 249 5 49 chr13 96937294 96937497 -23346815 - B3 SINE B2 -19 197 4 7 1324 312 102 20 0 chr13 96937627 96937676 -23346636 - HAL1-3A_ME LINE L1 -833 2025 1976 7 1324 546 189 0 0 chr13 96937676 96937787 -23346525 + (TG)n Simple_repeat Simple_repeat 1 111 0 7 1324 705 97 0 0 chr13 96938094 96938197 -23346115 + (TCTCCC)n Simple_repeat Simple_repeat 3 105 0 7 1324 501 84 0 0 chr13 96938205 96938276 -23346036 + (CA)n Simple_repeat Simple_repeat 2 72 0 7 1324 423 236 0 45 chr13 96938290 96938401 -23345911 - L1MA8 LINE L1 -25 6266 6161 7 1324 306 255 206 28 chr13 96938663 96938877 -23345435 + L1ME3A LINE L1 5850 6101 -72 7 1324 670 184 39 33 chr13 96939592 96939772 -23344540 + Lx9 LINE L1 7421 7601 -43 7 1324 23 33 0 0 chr13 96939953 96939983 -23344329 + AT_rich Low_complexity Low_complexity 1 30 0 7 1324 251 406 47 0 chr13 96940992 96941120 -23343192 - MIRb SINE MIR -14 254 121 7 1324 248 367 33 8 chr13 96941522 96941643 -23342669 - 7SK RNA RNA -177 154 31 7 1324 24 32 0 0 chr13 96941906 96941937 -23342375 + AT_rich Low_complexity Low_complexity 1 31 0 7 1324 423 191 26 71 chr13 96942048 96942161 -23342151 + MTC LTR MaLR 1 108 -313 7 1324 889 250 14 9 chr13 96943432 96943642 -23340670 - B3 SINE B2 -4 212 2 7 1324 279 0 0 0 chr13 96944166 96944197 -23340115 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1324 2197 79 10 26 chr13 96944205 96944518 -23339794 + L1_Mus3 LINE L1 6330 6637 -1 7 1324 297 0 0 0 chr13 96944917 96944950 -23339362 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1324 2919 44 0 3 chr13 96946227 96946570 -23337742 - ORR1A0 LTR MaLR -4 342 1 7 1324 2473 322 39 17 chr13 96946663 96947598 -23336714 + Lx8 LINE L1 6278 7232 -241 7 1324 360 0 0 0 chr13 96948333 96948373 -23335939 + (TG)n Simple_repeat Simple_repeat 2 41 0 7 1324 1061 42 0 7 chr13 96948546 96948689 -23335623 - B1_Mm SINE Alu -1 146 5 7 1324 322 336 76 95 chr13 96948830 96949093 -23335219 + Kanga2_a DNA Tc2 77 334 -554 8 1324 201 158 0 0 chr13 96949229 96949267 -23335045 + A-rich Low_complexity Low_complexity 2 39 0 8 1324 149 51 0 14 chr13 96949287 96949339 -23334973 + AT_rich Low_complexity Low_complexity 1 52 0 8 1324 6609 109 16 0 chr13 96949339 96950254 -23334058 + Lx4A LINE L1 6129 7058 0 8 1324 149 51 0 14 chr13 96950254 96950478 -23333834 + AT_rich Low_complexity Low_complexity 1 221 0 8 1324 295 293 0 66 chr13 96952317 96952423 -23331889 - PB1D10 SINE Alu -18 99 1 8 1324 1645 95 177 16 chr13 96953422 96953744 -23330568 + ORR1B1 LTR MaLR 1 374 -20 8 1324 21 95 0 0 chr13 96954228 96954291 -23330021 + AT_rich Low_complexity Low_complexity 1 63 0 8 1324 493 323 128 43 chr13 96954952 96955350 -23328962 + MLT1K LTR MaLR 1 432 -163 8 1324 24 32 0 0 chr13 96955531 96955562 -23328750 + AT_rich Low_complexity Low_complexity 1 31 0 8 1324 291 28 0 0 chr13 96956533 96956569 -23327743 + (TC)n Simple_repeat Simple_repeat 2 37 0 8 1324 303 28 0 0 chr13 96956569 96956604 -23327708 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 1324 2122 168 24 3 chr13 96956736 96957106 -23327206 - ORR1C1 LTR MaLR 0 378 1 8 1324 288 0 0 0 chr13 96957119 96957151 -23327161 + (TG)n Simple_repeat Simple_repeat 1 32 0 8 1324 198 0 0 0 chr13 96957498 96957520 -23326792 + (TA)n Simple_repeat Simple_repeat 2 23 0 8 1324 275 322 71 34 chr13 96957538 96957924 -23326388 + MER20B DNA MER1_type 297 742 -41 8 1324 1186 68 0 0 chr13 96958148 96958295 -23326017 + B1_Mus1 SINE Alu 1 147 -1 8 1324 384 305 112 14 chr13 96959480 96959756 -23324556 - L2a LINE L2 -8 3418 3116 8 1324 245 312 97 30 chr13 96959950 96960115 -23324197 - L2a LINE L2 -576 2843 2668 8 1324 965 260 66 63 chr13 96960198 96960547 -23323765 + ORR1E LTR MaLR 3 352 -7 8 1324 617 164 18 0 chr13 96960869 96960979 -23323333 - ORR1C1 LTR MaLR 0 378 267 8 1324 422 294 43 29 chr13 96960982 96961122 -23323190 - RMER13B LTR ERVK -4 904 763 8 1324 1481 164 33 26 chr13 96961129 96961399 -23322913 - ORR1C1 LTR MaLR -106 272 1 8 1324 1097 113 25 25 chr13 96961399 96961598 -23322714 - ORR1C1-int LTR MaLR 0 1509 1311 8 1324 1967 172 66 55 chr13 96961609 96962157 -23322155 + RLTR31_Mm LTR ERVK 8 561 0 8 1324 2795 179 35 7 chr13 96962157 96962801 -23321511 - ORR1C1-int LTR MaLR -193 1316 524 8 1324 440 69 0 0 chr13 96962837 96962891 -23321421 - ORR1C1 LTR MaLR 0 378 325 8 1324 1702 215 103 28 chr13 96962891 96963359 -23320953 - RMER19C LTR ERVK 0 611 109 8 1324 1347 140 115 67 chr13 96963406 96963719 -23320593 - ORR1C1 LTR MaLR -50 328 1 8 1324 307 105 35 0 chr13 96964084 96964141 -23320171 + (TC)n Simple_repeat Simple_repeat 2 60 0 8 1324 828 162 42 0 chr13 96964141 96964283 -23320029 - B1_Mur3 SINE Alu 0 149 2 8 1324 286 280 23 113 chr13 96964283 96964315 -23319997 - MT2B LTR ERVL -445 156 137 8 1324 307 246 16 134 chr13 96964380 96964507 -23319805 + RLTR42-int LTR ERVK 1219 1330 -4192 8 1324 258 56 0 0 chr13 96965326 96965362 -23318950 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 8 1324 336 350 6 24 chr13 96965770 96965934 -23318378 + MIR SINE MIR 21 181 -81 8 1324 309 26 0 0 chr13 96966693 96966731 -23317581 + (TTTG)n Simple_repeat Simple_repeat 4 41 0 8 1324 29704 116 11 8 chr13 96967508 96973624 -23310688 - L1_Mus3 LINE L1 -3 6635 478 8 1324 763 102 15 0 chr13 96973836 96973973 -23310339 + (TCTA)n Simple_repeat Simple_repeat 4 142 0 8 1324 458 271 123 82 chr13 96974687 96974956 -23309356 - B4 SINE B4 -11 281 2 8 1324 3605 18 0 0 chr13 96976469 96976865 -23307447 - MTA_Mm LTR MaLR 0 396 1 8 1324 5630 216 54 27 chr13 96977414 96978702 -23305610 - Lx7 LINE L1 0 7696 6374 8 1324 387 230 440 58 chr13 96978832 96979105 -23305207 - RMER21B LTR ERV1 -399 443 66 8 1324 3455 202 59 49 chr13 96979136 96979313 -23304999 - Lx7 LINE L1 -1300 6396 6196 8 1324 189 74 0 0 chr13 96979313 96979340 -23304972 + (TG)n Simple_repeat Simple_repeat 2 28 0 8 1324 11399 173 53 45 chr13 96979340 96980942 -23303370 - Lx7 LINE L1 -1501 6195 4630 8 1324 189 0 0 0 chr13 96980942 96980963 -23303349 + (TTG)n Simple_repeat Simple_repeat 3 23 0 8 1324 11399 166 52 45 chr13 96980963 96981695 -23302617 - Lx7 LINE L1 -1251 4629 3851 8 1324 381 123 0 0 chr13 96981695 96981760 -23302552 + (TG)n Simple_repeat Simple_repeat 2 66 0 8 1324 11399 166 52 45 chr13 96981760 96982145 -23302167 - Lx7 LINE L1 -2030 3850 3470 8 1324 450 0 0 0 chr13 96982158 96982208 -23302104 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 8 1324 1115 50 7 0 chr13 96982209 96982349 -23301963 - B1_Mm SINE Alu -6 141 1 8 1324 7880 51 21 2 chr13 96982357 96983777 -23300535 - L1Md_F2 LINE L1 -8 6574 5130 8 1324 9527 168 30 22 chr13 96983783 96984788 -23299524 - Lx7 LINE L1 -2410 3470 2473 8 1324 2906 207 104 93 chr13 96984788 96985367 -23298945 - RMER17B LTR ERVK 0 958 435 8 1324 1038 17 0 0 chr13 96985367 96985487 -23298825 + (GGGAGA)n Simple_repeat Simple_repeat 5 124 0 8 1324 2906 207 104 93 chr13 96985487 96985854 -23298458 - RMER17B LTR ERVK -524 434 1 8 1324 9527 168 30 22 chr13 96985854 96986823 -23297489 - Lx7 LINE L1 -3408 2472 1480 8 1324 828 223 72 30 chr13 96988179 96988335 -23295977 + ORR1D1 LTR MaLR 1 170 -204 8 1324 423 0 0 0 chr13 96988335 96988382 -23295930 + (TC)n Simple_repeat Simple_repeat 2 48 0 8 1324 828 223 72 30 chr13 96988382 96988461 -23295851 + ORR1D1 LTR MaLR 171 246 -128 8 1324 914 199 11 22 chr13 96988465 96988650 -23295662 - ORR1D1 LTR MaLR -191 183 1 8 1324 545 337 45 49 chr13 96988652 96989005 -23295307 + MLT2C1 LTR ERVL 6 361 -53 8 1324 233 286 0 38 chr13 96989005 96989085 -23295227 + GA-rich Low_complexity Low_complexity 6 82 0 8 1324 952 257 23 38 chr13 96989120 96989383 -23294929 - ORR1D2 LTR MaLR -1 369 111 8 1324 730 182 7 7 chr13 96989384 96989533 -23294779 + RMER19B LTR ERVK 1 149 -753 8 1324 3602 175 105 7 chr13 96989549 96990310 -23294002 + RMER19B LTR ERVK 55 890 -12 8 1324 517 237 17 0 chr13 96990316 96990434 -23293878 - ORR1D2 LTR MaLR -248 122 3 8 1324 210 352 34 48 chr13 96990437 96990583 -23293729 + MIRb SINE MIR 99 242 -26 8 1324 276 149 0 0 chr13 96990593 96990640 -23293672 + (CACCAT)n Simple_repeat Simple_repeat 4 50 0 8 1324 263 276 30 20 chr13 96991419 96991519 -23292793 - Kanga1 DNA Tc2 -1145 600 500 8 1324 288 229 14 0 chr13 96991800 96991870 -23292442 + MTE2a LTR MaLR 137 207 -172 8 1324 615 191 0 0 chr13 96991869 96991974 -23292338 + RLTR23 LTR ERV1 326 430 0 8 1324 359 258 11 0 chr13 96992130 96992219 -23292093 - MER57A-int LTR ERV1 -280 5907 5818 8 165 1996 40 16 4 chr13 96993136 96993386 -23290926 - L1Md_F3 LINE L1 0 6584 6332 8 1325 8357 46 0 0 chr13 96993399 96994767 -23289545 - L1Md_F2 LINE L1 0 6582 5215 8 1325 2150 140 92 20 chr13 96994871 96995264 -23289048 - MTC LTR MaLR 0 421 1 8 1325 1303 109 6 0 chr13 96995435 96995618 -23288694 - L1_Mm LINE L1 -404 5479 5296 8 1325 398 236 88 73 chr13 96995618 96995810 -23288502 - RLTR46 LTR ERVK 0 320 126 8 1325 639 162 29 29 chr13 96995854 96995994 -23288318 - RLTR46 LTR ERVK -180 140 1 8 1325 1201 115 16 5 chr13 96995994 96996187 -23288125 - L1_Mur2 LINE L1 -582 5295 5101 8 1325 2037 150 0 0 chr13 96996186 96996506 -23287806 + L1_Mm LINE L1 4798 5117 -766 8 1325 196 309 123 0 chr13 96997263 96997344 -23286968 + MIRb SINE MIR 97 187 -81 8 1325 3188 121 35 0 chr13 96997882 96998370 -23285942 - Lx2 LINE L1 0 6997 6493 8 1325 1754 181 56 3 chr13 96998371 96998726 -23285586 - MTD LTR MaLR -12 407 34 8 1325 3490 116 2 12 chr13 96999086 96999594 -23284718 - Lx3B LINE L1 -1 6972 6470 8 1325 2772 143 0 0 chr13 96999594 97000000 -23284312 + L1Md_F LINE L1 143 548 -5971 8 1325 34065 70 2 0 chr13 97000002 97004997 -23279315 + L1Md_F2 LINE L1 648 5585 -298 1 1325 8846 38 1 3 chr13 97004998 97005996 -23278316 + L1Md_F2 LINE L1 5587 6582 0 1 1325 3108 121 39 24 chr13 97005996 97006239 -23278073 - Lx3B LINE L1 -489 6484 6234 2 1325 207 0 0 0 chr13 97006239 97006262 -23278050 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1325 3108 121 39 24 chr13 97006262 97006527 -23277785 - Lx3B LINE L1 -740 6233 5968 2 1325 258 32 0 0 chr13 97007895 97007926 -23276386 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1325 414 0 0 0 chr13 97008144 97008190 -23276122 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1325 423 248 17 34 chr13 97008218 97008335 -23275977 - PB1D10 SINE Alu -2 115 1 6 1325 360 64 0 0 chr13 97008724 97008771 -23275541 + (TATG)n Simple_repeat Simple_repeat 1 47 0 7 1325 389 280 6 19 chr13 97008898 97009043 -23275269 + MIR SINE MIR 5 147 -121 8 1325 361 261 0 0 chr13 97009377 97009446 -23274866 - ID4_ SINE ID -6 77 9 9 1325 6483 146 29 54 chr13 97010436 97011741 -23272571 + L1_Mur3 LINE L1 1797 3068 -2812 1 1325 815 132 56 6 chr13 97011743 97011903 -23272409 - L1_Mur3 LINE L1 -4186 1694 1527 1 1325 1823 236 130 10 chr13 97011917 97012554 -23271758 - L1_Mur3 LINE L1 -7029 699 17 1 1325 435 271 0 0 chr13 97012559 97012677 -23271635 - L1_Mur3 LINE L1 -7210 502 385 1 1325 833 263 35 15 chr13 97012849 97013046 -23271266 - B3 SINE B2 -10 206 6 1 1325 832 241 63 21 chr13 97013165 97013356 -23270956 + B3 SINE B2 1 199 -17 1 1325 229 367 45 9 chr13 97013625 97013735 -23270577 - LTR16C LTR ERVL -1 488 375 1 1325 379 291 87 0 chr13 97013769 97013896 -23270416 + Lx8 LINE L1 6252 6389 -1084 1 1325 560 263 108 13 chr13 97013912 97014070 -23270242 + Lx8 LINE L1 6443 6615 -858 1 1325 324 0 0 0 chr13 97014194 97014230 -23270082 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1 1325 1713 266 150 38 chr13 97014435 97015116 -23269196 + Lx8 LINE L1 6714 7470 -3 1 1325 1156 74 104 6 chr13 97015301 97015465 -23268847 + B2_Mm2 SINE B2 1 180 -15 1 1325 3400 47 0 0 chr13 97015465 97015867 -23268445 + L1Md_F2 LINE L1 6025 6426 -156 1 1325 453 247 0 0 chr13 97016207 97016296 -23268016 + B3A SINE B2 1 89 -109 2 1325 582 216 24 16 chr13 97016297 97016424 -23267888 + MTD LTR MaLR 1 128 -291 2 1325 1178 126 73 5 chr13 97016445 97016636 -23267676 + MTD LTR MaLR 208 411 -8 2 1325 404 257 86 0 chr13 97016639 97016744 -23267568 + B3 SINE B2 98 211 -5 2 1325 378 0 0 0 chr13 97017312 97017354 -23266958 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 2 1325 278 238 16 16 chr13 97018332 97018396 -23265916 - MTEa LTR MaLR 0 379 316 2 1325 460 236 148 33 chr13 97018455 97018665 -23265647 - RLTR15 LTR ERVK -68 291 58 2 1325 6013 41 10 0 chr13 97018777 97019459 -23264853 + L1Md_T LINE L1 5894 6582 0 2 1325 709 313 24 111 chr13 97019472 97019806 -23264506 - MTEa LTR MaLR -59 320 16 2 1325 275 293 71 4 chr13 97020037 97020178 -23264134 - L1MD3 LINE L1 -195 5984 5827 2 1325 4392 139 57 177 chr13 97020261 97020471 -23263841 + Lx7 LINE L1 4814 5014 -866 2 1325 880 157 63 0 chr13 97020471 97020630 -23263682 - URR1A DNA MER1_type 0 226 58 2 1325 4392 139 57 177 chr13 97020630 97020657 -23263655 + Lx7 LINE L1 5015 5041 -839 2 1325 324 0 0 0 chr13 97020657 97020693 -23263619 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1325 4392 139 57 177 chr13 97020693 97021146 -23263166 + Lx7 LINE L1 5042 5512 -368 2 1325 2335 160 87 5 chr13 97021146 97021535 -23262777 - MTC LTR MaLR 0 421 1 3 1325 9524 187 46 84 chr13 97021535 97023405 -23260907 + Lx7 LINE L1 5513 7361 -335 2 1325 531 0 0 0 chr13 97023405 97023464 -23260848 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 3 1325 9524 198 44 62 chr13 97023464 97023808 -23260504 + Lx7 LINE L1 7362 7696 0 2 1325 580 301 0 22 chr13 97024114 97024250 -23260062 + RSINE1 SINE B4 17 149 -16 3 1325 360 0 0 0 chr13 97024255 97024295 -23260017 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1325 180 0 0 0 chr13 97024460 97024480 -23259832 + (TGGGGG)n Simple_repeat Simple_repeat 2 21 0 3 1325 426 20 0 0 chr13 97026329 97026380 -23257932 + (CAGAGA)n Simple_repeat Simple_repeat 4 54 0 3 1325 240 171 0 0 chr13 97026432 97026473 -23257839 + Lx8 LINE L1 7416 7456 -17 3 1325 315 321 55 138 chr13 97027000 97027217 -23257095 + MLT1A LTR MaLR 25 223 -142 3 1325 277 267 17 95 chr13 97027601 97027634 -23256678 + MLT1A LTR MaLR 344 374 -93 3 1325 1249 141 116 0 chr13 97027634 97027833 -23256479 - URR1A DNA MER1_type -4 222 1 3 1325 277 267 17 95 chr13 97027833 97027915 -23256397 + MLT1A LTR MaLR 375 450 -17 3 1325 991 288 110 7 chr13 97027926 97028227 -23256085 + MTEa LTR MaLR 1 332 -47 3 1325 494 251 231 12 chr13 97028228 97028397 -23255915 + Lx8 LINE L1 6619 6824 -649 4 1325 239 240 160 0 chr13 97028400 97028475 -23255837 + Tigger6b DNA MER2_type 1507 1593 -4 4 1325 3521 72 2 5 chr13 97029787 97030234 -23254078 - L1_Mus4 LINE L1 -1 6635 6190 4 1325 216 341 0 24 chr13 97030436 97030520 -23253792 + MIRb SINE MIR 185 266 -2 4 1325 2782 106 87 13 chr13 97030609 97031001 -23253311 - MTC LTR MaLR 0 421 1 4 1325 435 237 94 10 chr13 97032037 97032285 -23252027 - L1M3 LINE L1 -714 5577 5292 4 1325 531 175 44 31 chr13 97032357 97032516 -23251796 - Lx2B LINE L1 0 7000 6840 4 1325 1064 220 50 26 chr13 97032509 97032812 -23251500 - Lx2B LINE L1 -43 6957 6648 4 1325 1545 154 4 4 chr13 97032813 97033061 -23251251 + Lx2B LINE L1 6387 6634 -366 4 1325 21 36 0 0 chr13 97033346 97033374 -23250938 + AT_rich Low_complexity Low_complexity 1 28 0 4 1325 267 244 43 22 chr13 97033914 97034006 -23250306 - MLT1A1 LTR MaLR -8 400 307 4 1325 471 207 66 41 chr13 97035640 97035761 -23248551 + ID_B1 SINE B4 86 209 -15 5 1325 907 298 5 0 chr13 97036437 97036645 -23247667 + B4 SINE B4 84 292 0 5 1325 276 30 0 0 chr13 97036729 97036762 -23247550 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1325 2240 214 99 10 chr13 97037220 97037715 -23246597 + Lx9 LINE L1 6172 6710 -934 5 1325 384 22 0 0 chr13 97038228 97038273 -23246039 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1325 220 182 14 43 chr13 97038282 97038351 -23245961 + GA-rich Low_complexity Low_complexity 2 68 0 5 1325 1069 221 0 25 chr13 97038568 97038772 -23245540 + B3 SINE B2 9 207 -9 5 1325 356 291 85 104 chr13 97039189 97039400 -23244912 - Lx8 LINE L1 -235 7238 7032 5 1325 366 331 52 40 chr13 97039433 97039606 -23244706 - MLT1C LTR MaLR -229 238 64 5 1325 35 54 0 0 chr13 97041418 97041474 -23242838 + AT_rich Low_complexity Low_complexity 1 56 0 5 1325 2291 210 217 8 chr13 97042218 97042827 -23241485 - RMER19A LTR ERVK -1 736 1 6 1325 303 49 0 0 chr13 97042875 97042916 -23241396 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 6 1325 2995 307 45 32 chr13 97042923 97043983 -23240329 - Lx9 LINE L1 -203 7441 6368 6 1325 242 29 29 0 chr13 97046064 97046099 -23238213 + (TTG)n Simple_repeat Simple_repeat 1 36 0 6 1325 1246 56 7 0 chr13 97046132 97046276 -23238036 - B1_Mus2 SINE Alu 0 147 3 6 1325 6070 96 28 25 chr13 97046943 97047795 -23236517 + Lx LINE L1 5800 6654 0 6 1325 1216 88 0 0 chr13 97047874 97048022 -23236290 + B1_Mus1 SINE Alu 1 148 0 6 1325 198 91 0 0 chr13 97048022 97048055 -23236257 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 6 1325 765 284 18 31 chr13 97048485 97048707 -23235605 - Lx5 LINE L1 -12 7038 6820 6 1325 520 17 0 0 chr13 97049107 97049166 -23235146 - L1Md_F2 LINE L1 -245 6337 6279 6 1325 2099 37 0 12 chr13 97049166 97049411 -23234901 + L1Md_A LINE L1 6341 6582 0 7 1325 312 315 122 37 chr13 97049694 97049882 -23234430 + LTR16A LTR ERVL 228 431 -20 7 1325 298 294 43 0 chr13 97049915 97050007 -23234305 - LTR40a LTR ERVL -8 511 416 7 1325 288 0 0 0 chr13 97050007 97050039 -23234273 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1325 488 176 10 0 chr13 97050039 97050141 -23234171 + (TA)n Simple_repeat Simple_repeat 1 103 0 7 1325 227 170 19 19 chr13 97050170 97050224 -23234088 + (TA)n Simple_repeat Simple_repeat 1 54 0 7 1325 37 52 0 0 chr13 97050224 97050282 -23234030 + AT_rich Low_complexity Low_complexity 1 58 0 7 1325 182 37 37 0 chr13 97050282 97050309 -23234003 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1325 967 260 23 47 chr13 97050317 97050616 -23233696 - B4A SINE B4 0 292 1 7 1325 6986 108 46 18 chr13 97051146 97052232 -23232080 + Lx LINE L1 5538 6653 -1 7 1325 292 329 96 19 chr13 97052372 97052685 -23231627 - HAL1 LINE L1 -1139 1368 1032 7 1325 417 176 187 0 chr13 97052728 97052819 -23231493 - B1_Mur2 SINE Alu -11 138 31 8 1325 1258 274 54 46 chr13 97053108 97053476 -23230836 + MTD LTR MaLR 49 419 0 8 1325 2366 108 23 17 chr13 97053770 97054117 -23230195 - L1_Mus3 LINE L1 0 6638 6290 8 1325 267 274 14 0 chr13 97054465 97054538 -23229774 + MIR SINE MIR 143 216 -46 8 1325 399 89 0 0 chr13 97054598 97054654 -23229658 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 8 1325 404 208 254 8 chr13 97054918 97055044 -23229268 - RMER15 LTR ERVL -13 562 406 8 1325 228 271 17 0 chr13 97055047 97055106 -23229206 + (TATG)n Simple_repeat Simple_repeat 3 62 0 8 1325 481 194 81 10 chr13 97055414 97055513 -23228799 + MTC LTR MaLR 308 413 -8 8 1325 243 306 0 0 chr13 97055834 97055906 -23228406 - MER20B DNA MER1_type -487 296 225 8 1325 421 260 8 8 chr13 97056033 97056161 -23228151 - L1MA6 LINE L1 -125 6175 6048 8 1325 244 405 96 23 chr13 97056163 97056383 -23227929 - MER20B DNA MER1_type -544 239 4 8 1325 1448 208 28 3 chr13 97056684 97056968 -23227344 + Lx5 LINE L1 6652 6942 -108 9 1325 584 165 0 9 chr13 97057011 97057127 -23227185 + (TA)n Simple_repeat Simple_repeat 1 115 0 9 1325 817 151 40 0 chr13 97058212 97058364 -23225948 + Lx9 LINE L1 7304 7461 -183 9 1325 450 0 0 0 chr13 97058372 97058422 -23225890 + (TG)n Simple_repeat Simple_repeat 2 51 0 9 1325 32 0 0 0 chr13 97059182 97059214 -23225098 + AT_rich Low_complexity Low_complexity 1 32 0 9 1325 286 313 158 29 chr13 97059544 97059715 -23224597 - MER110 LTR ERV1 -230 261 69 9 1325 261 0 0 0 chr13 97060014 97060043 -23224269 + (TG)n Simple_repeat Simple_repeat 2 30 0 9 1325 184 300 121 36 chr13 97060104 97060187 -23224125 + MIRm SINE MIR 173 262 -14 9 1325 1030 70 120 13 chr13 97060398 97060556 -23223756 + B2_Mm2 SINE B2 2 176 -19 9 1325 183 42 0 0 chr13 97060556 97060580 -23223732 + (CATAA)n Simple_repeat Simple_repeat 2 25 0 9 1325 225 0 0 0 chr13 97060831 97060856 -23223456 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 1 1325 527 294 93 12 chr13 97061736 97061886 -23222426 + B3 SINE B2 1 165 -28 1 1325 1461 60 11 0 chr13 97061886 97062069 -23222243 - B2_Mm1t SINE B2 -7 186 2 1 1325 396 294 93 12 chr13 97062069 97062090 -23222222 + B2_Mm1a SINE B2 166 185 -8 1 1325 1075 77 0 7 chr13 97062617 97062760 -23221552 + B1_Mus1 SINE Alu 7 148 0 1 1325 241 319 8 16 chr13 97063104 97063225 -23221087 + L1M3 LINE L1 4730 4849 -1291 1 1325 2220 107 3 58 chr13 97063447 97063793 -23220519 - ORR1A2 LTR MaLR 0 327 1 1 1325 430 253 48 143 chr13 97064145 97064334 -23219978 - MTEb LTR MaLR -6 373 203 1 1325 878 150 15 0 chr13 97064565 97064698 -23219614 + B1_Mus1 SINE Alu 1 135 -13 1 1325 225 0 0 0 chr13 97064698 97064723 -23219589 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 1 1325 375 264 0 90 chr13 97064725 97064825 -23219487 + MTEa LTR MaLR 19 109 -270 1 1325 414 0 0 0 chr13 97066029 97066075 -23218237 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1325 206 291 144 44 chr13 97066361 97066451 -23217861 - L2b LINE L2 -7 3419 3271 1 1325 2808 28 0 0 chr13 97066656 97066978 -23217334 - RLTRETN_Mm LTR ERVK 0 322 1 1 1325 515 240 208 56 chr13 97066990 97067040 -23217272 - ORR1D1 LTR MaLR -128 256 166 1 1325 897 110 19 0 chr13 97067040 97067194 -23217118 + (GA)n Simple_repeat Simple_repeat 2 158 0 1 1325 568 207 25 116 chr13 97067194 97067359 -23216953 - ORR1D1 LTR MaLR -219 165 8 1 1325 297 328 23 70 chr13 97067590 97067718 -23216594 - MLT1C LTR MaLR -52 415 294 1 1325 281 260 118 20 chr13 97067823 97067925 -23216387 - MLT1C LTR MaLR -362 143 32 1 1325 366 72 345 0 chr13 97068040 97068150 -23216162 - B2_Mm2 SINE B2 -1 194 47 1 1325 1279 102 11 0 chr13 97068219 97068395 -23215917 - B2_Mm1t SINE B2 -14 179 2 1 1325 29 70 0 0 chr13 97068584 97068641 -23215671 + AT_rich Low_complexity Low_complexity 1 57 0 1 1325 25 31 0 0 chr13 97068662 97068694 -23215618 + AT_rich Low_complexity Low_complexity 1 32 0 1 1325 2364 162 62 44 chr13 97068792 97069296 -23215016 - Lx5 LINE L1 -176 6874 6362 1 1325 450 0 0 0 chr13 97069319 97069369 -23214943 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1325 267 286 214 0 chr13 97069372 97069442 -23214870 - B3A SINE B2 -51 147 63 1 1325 357 330 60 0 chr13 97069450 97069550 -23214762 - B3A SINE B2 -92 106 1 1 1325 2944 80 0 2 chr13 97069624 97070023 -23214289 - L1_Mus4 LINE L1 -9 6627 6230 1 1325 299 292 134 10 chr13 97070043 97070140 -23214172 - PB1D10 SINE Alu -7 110 2 1 1325 21 0 0 0 chr13 97070404 97070425 -23213887 + AT_rich Low_complexity Low_complexity 1 21 0 1 1325 1183 259 68 12 chr13 97070498 97070838 -23213474 - ORR1E LTR MaLR 0 359 1 1 1325 759 181 65 7 chr13 97071065 97071204 -23213108 - B1_Mus2 SINE Alu 0 147 1 1 1325 576 249 0 0 chr13 97071382 97071547 -23212765 + (TG)n Simple_repeat Simple_repeat 1 165 0 1 1325 2499 54 0 6 chr13 97071875 97072189 -23212123 + L1Md_F2 LINE L1 6258 6569 -13 1 1325 197 79 0 73 chr13 97073449 97073490 -23210822 + A-rich Low_complexity Low_complexity 2 39 0 1 1325 675 283 35 0 chr13 97073553 97073726 -23210586 + B4A SINE B4 4 182 -110 1 1325 683 237 178 0 chr13 97073725 97073877 -23210435 + B3A SINE B2 8 186 -12 1 1325 265 302 22 71 chr13 97073980 97074247 -23210065 + RMER17D2 LTR ERVK 242 495 -314 1 1325 3498 91 10 14 chr13 97074254 97074755 -23209557 - Lx LINE L1 -3 6651 6153 1 1325 676 335 28 20 chr13 97074951 97075201 -23209111 + MLT1G3 LTR MaLR 342 593 -2 1 1325 364 296 124 68 chr13 97075459 97075712 -23208600 - MLT1H1 LTR MaLR -287 268 4 1 1325 415 110 29 39 chr13 97076499 97076603 -23207709 + (TTTA)n Simple_repeat Simple_repeat 2 104 0 1 1325 4358 190 16 22 chr13 97076766 97077653 -23206659 + Lx7 LINE L1 6469 7349 -347 1 1325 516 146 0 0 chr13 97077730 97077812 -23206500 - ORR1C2 LTR MaLR 0 384 303 1 1325 2639 19 0 0 chr13 97077831 97078147 -23206165 + RLTRETN_Mm LTR ERVK 7 322 0 1 1325 25808 25 8 4 chr13 97078147 97081343 -23202969 + MMETn-int LTR ERVK 1 3208 -1636 1 1325 1571 179 34 68 chr13 97081350 97081674 -23202638 - ORR1C2 LTR MaLR -71 313 1 1 1325 604 203 124 10 chr13 97081674 97081868 -23202444 + Lx7 LINE L1 7480 7695 -1 1 1325 519 257 94 5 chr13 97081980 97082237 -23202075 - L1MA6 LINE L1 -97 6203 5915 1 1325 383 332 87 43 chr13 97082541 97082771 -23201541 + HAL1 LINE L1 44 283 -2224 1 1325 392 301 39 0 chr13 97083339 97083542 -23200770 + L1MA4 LINE L1 5693 5903 -397 1 1325 350 244 0 26 chr13 97083591 97083719 -23200593 + L1MA8 LINE L1 5798 5923 -248 1 1325 25 0 0 0 chr13 97083722 97083747 -23200565 + AT_rich Low_complexity Low_complexity 1 25 0 1 1325 804 155 24 13 chr13 97083800 97083969 -23200343 + B2_Mm2 SINE B2 1 168 -25 1 1325 2507 60 3 0 chr13 97083969 97084283 -23200029 + L1_Mus2 LINE L1 6252 6566 0 1 1325 666 223 26 53 chr13 97084283 97084302 -23200010 + B2_Mm1t SINE B2 169 184 -9 1 1325 5403 132 34 20 chr13 97084419 97085305 -23199007 - Lx3B LINE L1 -4 6969 6072 1 1325 368 252 36 66 chr13 97085588 97085754 -23198558 + RNLTR23 LTR ERVK 482 642 0 1 1325 234 234 243 0 chr13 97086075 97086186 -23198126 - L1M2 LINE L1 -875 5268 5131 1 1325 3177 90 159 9 chr13 97086374 97087331 -23196981 + L1VL2 LINE L1 314 1415 -2200 1 1325 3343 108 43 17 chr13 97087327 97088360 -23195952 - L1VL4 LINE L1 -2154 1405 345 1 1325 185 321 0 0 chr13 97089506 97089562 -23194750 + MIR SINE MIR 113 168 -94 1 1325 397 345 87 62 chr13 97089581 97090020 -23194292 + L1ME3B LINE L1 5436 5885 -355 1 1325 1682 239 83 58 chr13 97090401 97090955 -23193357 + RLTR20D LTR ERVK 1 568 0 1 1325 1203 140 86 14 chr13 97091186 97091396 -23192916 - URR1B DNA MER1_type 0 225 1 1 1325 402 266 54 8 chr13 97091794 97091923 -23192389 + B4A SINE B4 15 149 -143 1 1325 261 0 0 0 chr13 97093623 97093652 -23190660 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1325 349 265 202 40 chr13 97094544 97094870 -23189442 + MTEa LTR MaLR 1 379 0 1 1325 423 283 37 28 chr13 97094875 97094984 -23189328 + PB1D10 SINE Alu 6 115 -2 1 1325 21 36 0 0 chr13 97095042 97095070 -23189242 + AT_rich Low_complexity Low_complexity 1 28 0 1 1325 1253 266 116 19 chr13 97095105 97095741 -23188571 - L1MC3 LINE L1 -23 7762 7065 1 1325 800 257 147 47 chr13 97095744 97096011 -23188301 - L1MC3 LINE L1 -1355 6430 6134 1 1325 243 0 0 0 chr13 97096011 97096038 -23188274 + (TA)n Simple_repeat Simple_repeat 1 27 0 1 1325 938 268 183 16 chr13 97096038 97096111 -23188201 - L1MC3 LINE L1 -1873 6169 6058 1 1325 3527 15 2 0 chr13 97096111 97096506 -23187806 + MTA_Mm LTR MaLR 1 396 0 1 1325 938 272 131 21 chr13 97096506 97096969 -23187343 - L1MC3 LINE L1 -287 6057 5546 1 1325 3012 144 59 80 chr13 97096969 97097594 -23186718 - RLTR18 LTR ERVK -4 612 1 1 1325 323 308 83 50 chr13 97097594 97097623 -23186689 - L1MC3 LINE L1 -617 5545 5518 1 1325 1154 119 0 28 chr13 97097686 97097868 -23186444 + RLTR18 LTR ERVK 339 515 -101 1 1325 1077 262 84 25 chr13 97098273 97098629 -23185683 + MTE2b LTR MaLR 1 377 -2 1 1325 243 0 0 0 chr13 97098742 97098769 -23185543 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1325 823 279 81 8 chr13 97099968 97100203 -23184109 - MER2 DNA MER2_type -1 344 93 1 1325 511 329 106 30 chr13 97100254 97100381 -23183931 - MLT1D LTR MaLR 0 505 369 1 1325 455 0 18 0 chr13 97100381 97100436 -23183876 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1325 511 329 106 30 chr13 97100436 97100609 -23183703 - MLT1D LTR MaLR -137 368 184 1 1325 279 161 0 0 chr13 97100610 97100666 -23183646 + (TTCA)n Simple_repeat Simple_repeat 3 58 0 1 1325 215 377 14 0 chr13 97100675 97100744 -23183568 - ID SINE ID -154 70 1 1 1325 239 302 171 23 chr13 97100806 97100894 -23183418 - MLT1D LTR MaLR -520 107 7 1 1325 203 156 0 0 chr13 97101816 97101848 -23182464 + (TTG)n Simple_repeat Simple_repeat 1 32 0 1 1325 426 20 0 0 chr13 97102118 97102169 -23182143 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1325 383 310 15 52 chr13 97102649 97102712 -23181600 + ID_B1 SINE B4 86 144 -80 1 1325 2386 99 9 0 chr13 97102712 97103036 -23181276 + ORR1A2 LTR MaLR 1 327 0 1 1325 383 310 15 52 chr13 97103036 97103108 -23181204 + ID_B1 SINE B4 145 216 -8 1 1325 334 275 0 51 chr13 97103133 97103230 -23181082 + ID4 SINE ID 9 100 -52 1 1325 405 0 0 0 chr13 97103460 97103505 -23180807 + (TA)n Simple_repeat Simple_repeat 1 45 0 1 1325 231 36 0 0 chr13 97103532 97103560 -23180752 + (TC)n Simple_repeat Simple_repeat 1 28 0 1 1325 405 54 0 0 chr13 97103560 97103615 -23180697 + (CA)n Simple_repeat Simple_repeat 1 56 0 1 1325 734 293 91 14 chr13 97103615 97103978 -23180334 - L1M5 LINE L1 -357 5822 5432 1 1325 9164 62 2 1 chr13 97104091 97105320 -23178992 - L1Md_F2 LINE L1 -21 5862 4633 1 1325 5295 62 6 9 chr13 97105320 97106009 -23178303 + L1Md_F2 LINE L1 5893 6579 -3 1 1325 330 335 58 19 chr13 97106022 97106229 -23178083 + L1MC4a LINE L1 7658 7872 -10 1 1325 21 0 0 0 chr13 97106343 97106364 -23177948 + AT_rich Low_complexity Low_complexity 1 21 0 1 1325 728 204 106 46 chr13 97106749 97106986 -23177326 + Tigger1 DNA MER2_type 2056 2306 -112 1 1325 279 346 161 5 chr13 97107852 97108038 -23176274 + LTR16A LTR ERVL 237 451 0 1 1325 666 367 98 12 chr13 97108059 97108547 -23175765 + Arthur1 DNA Tip100 118 647 -3300 1 1325 289 256 163 15 chr13 97108574 97108709 -23175603 + Arthur1 DNA Tip100 3476 3630 -317 1 1325 383 324 35 17 chr13 97108969 97109142 -23175170 - MIR SINE MIR 0 262 87 1 1325 281 286 43 0 chr13 97109126 97109196 -23175116 + L2a LINE L2 3354 3426 0 1 1325 1559 274 31 5 chr13 97109377 97109852 -23174460 + Lx6 LINE L1 6507 7372 -88 1 1325 2092 203 2 14 chr13 97110059 97110484 -23173828 - MTC LTR MaLR 0 421 2 1 1325 236 275 38 38 chr13 97110614 97110720 -23173592 + Charlie10 DNA MER1_type 2101 2206 -616 1 1325 2522 153 57 10 chr13 97111935 97112337 -23171975 + MTC LTR MaLR 1 421 0 1 1325 3050 152 43 45 chr13 97112337 97112916 -23171396 + MTC-int LTR MaLR 3 580 -678 1 1325 25 0 0 0 chr13 97112975 97113000 -23171312 + AT_rich Low_complexity Low_complexity 1 25 0 1 1325 1024 160 129 40 chr13 97113675 97113877 -23170435 - URR1A DNA MER1_type -2 224 5 1 1325 403 73 29 0 chr13 97114521 97114589 -23169723 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 1325 433 236 56 19 chr13 97114823 97114931 -23169381 - ID_B1 SINE B4 -14 210 99 1 1325 296 291 81 0 chr13 97114857 97114943 -23169369 - PB1D7 SINE Alu -22 98 6 2 1325 511 290 18 24 chr13 97115720 97115886 -23168426 - Lx8 LINE L1 -451 7022 6858 2 1325 749 239 82 9 chr13 97116300 97116542 -23167770 + L1_Rod LINE L1 1950 2215 -3925 2 1325 4425 80 7 12 chr13 97116599 97117180 -23167132 - Lx3_Mus LINE L1 0 7009 6432 2 1325 297 0 0 0 chr13 97117308 97117341 -23166971 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 2 1325 3661 28 2 0 chr13 97117808 97118203 -23166109 + MTA_Mm LTR MaLR 1 396 0 2 1325 296 217 17 22 chr13 97118619 97118798 -23165514 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 2 1325 542 318 27 63 chr13 97118798 97119097 -23165215 - B4A SINE B4 -4 288 1 2 1325 285 111 0 0 chr13 97119097 97119142 -23165170 - ID_B1 SINE B4 0 224 180 2 1325 232 223 96 104 chr13 97119142 97119222 -23165090 - B1F2 SINE Alu -2 147 24 2 1325 1023 280 34 41 chr13 97119455 97119749 -23164563 + B4A SINE B4 1 292 0 2 1325 457 319 0 0 chr13 97119826 97119939 -23164373 - PB1D7 SINE Alu -7 113 1 2 1325 225 0 0 0 chr13 97120416 97120441 -23163871 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1325 360 0 0 0 chr13 97120441 97120480 -23163832 + (GA)n Simple_repeat Simple_repeat 1 40 0 2 1325 375 23 0 0 chr13 97121855 97121899 -23162413 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1325 982 171 20 0 chr13 97121900 97122046 -23162266 - B1_Mur2 SINE Alu 0 149 1 2 1325 1544 75 16 0 chr13 97122056 97122242 -23162070 - B2_Mm2 SINE B2 -5 190 2 2 1325 33 80 0 0 chr13 97122340 97122415 -23161897 + AT_rich Low_complexity Low_complexity 1 75 0 2 1325 1148 289 76 62 chr13 97122961 97123272 -23161040 + Lx8 LINE L1 5065 5369 -478 2 1325 857 156 81 29 chr13 97123272 97123444 -23160868 + B2_Mm2 SINE B2 1 181 -14 2 1325 1148 296 71 56 chr13 97123444 97124012 -23160300 + Lx8 LINE L1 5370 5986 -1487 2 165 256 200 0 84 chr13 97124350 97124421 -23159891 + Lx9 LINE L1 5908 5972 -1672 2 1326 3335 43 51 0 chr13 97124466 97124857 -23159455 - RLTR10A LTR ERVK 0 411 1 2 1326 1573 283 26 66 chr13 97124987 97125178 -23159134 + Lx9 LINE L1 6274 6441 -1203 2 1326 1102 81 162 0 chr13 97125178 97125338 -23158974 + B2_Mm1t SINE B2 1 186 -7 2 1326 1573 283 26 66 chr13 97125338 97125691 -23158621 + Lx9 LINE L1 6442 6795 -849 2 1326 394 257 99 86 chr13 97125688 97125850 -23158462 + Lx9 LINE L1 6997 7160 -484 2 1326 2950 294 91 32 chr13 97125881 97127112 -23157200 - Lx9 LINE L1 0 7644 6342 2 1326 40742 3 1 34 chr13 97127548 97134326 -23149986 - L1Md_A LINE L1 0 6582 27 2 1326 536 234 8 23 chr13 97134330 97134461 -23149851 - L1_Rod LINE L1 -11 5836 5708 2 1326 434 178 11 0 chr13 97134462 97134552 -23149760 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 2 1326 756 205 37 6 chr13 97134552 97134714 -23149598 - L1_Rod LINE L1 -381 5466 5300 2 1326 2613 245 119 43 chr13 97134707 97135702 -23148610 - L1_Rod LINE L1 -1960 3887 2818 2 1326 3447 106 23 8 chr13 97135810 97136284 -23148028 - L1_Mus3 LINE L1 0 6638 6158 2 1326 1440 163 49 30 chr13 97136330 97136659 -23147653 - L1_Rod LINE L1 -4219 1628 1294 2 1326 409 309 6 75 chr13 97136656 97136817 -23147495 + Lx9 LINE L1 7016 7165 -479 2 1326 234 178 0 0 chr13 97136841 97136886 -23147426 + GA-rich Low_complexity Low_complexity 3 47 0 2 1326 21 0 0 0 chr13 97136959 97136980 -23147332 + AT_rich Low_complexity Low_complexity 1 21 0 2 1326 272 133 17 0 chr13 97137355 97137415 -23146897 + (CA)n Simple_repeat Simple_repeat 2 62 0 2 1326 270 114 45 0 chr13 97137415 97137459 -23146853 - MTC LTR MaLR -374 47 2 2 1326 973 290 20 30 chr13 97137487 97137782 -23146530 - B4A SINE B4 0 292 1 2 1326 486 257 76 0 chr13 97139410 97139515 -23144797 + PB1D10 SINE Alu 5 117 0 2 1326 225 302 121 86 chr13 97139704 97139878 -23144434 + L1ME2 LINE L1 5862 6041 -123 2 1326 682 85 31 8 chr13 97139903 97140033 -23144279 + (TTGG)n Simple_repeat Simple_repeat 4 136 0 2 1326 503 266 0 9 chr13 97140033 97140143 -23144169 - PB1D10 SINE Alu -8 109 1 2 1326 495 349 187 29 chr13 97140301 97141290 -23143022 + L2 LINE L2 1419 2563 -856 2 1326 1993 146 11 84 chr13 97141847 97142229 -23142083 - ORR1B2 LTR MaLR -2 365 12 2 1326 930 275 71 19 chr13 97142340 97142652 -23141660 + MTD LTR MaLR 84 405 -14 2 1326 290 348 175 94 chr13 97144382 97144890 -23139422 - MLT1N2 LTR MaLR -8 554 6 2 1326 25 0 0 0 chr13 97144890 97144915 -23139397 + AT_rich Low_complexity Low_complexity 1 25 0 2 1326 30 0 0 0 chr13 97145556 97145586 -23138726 + AT_rich Low_complexity Low_complexity 1 30 0 2 1326 1024 257 65 45 chr13 97147922 97148232 -23136080 + ORR1E LTR MaLR 42 357 -2 2 1326 595 292 111 57 chr13 97148688 97149080 -23135232 + MLT2B4 LTR ERVL 13 397 -17 2 1326 1773 159 24 7 chr13 97149234 97149526 -23134786 - Lx5 LINE L1 -3 7047 6751 2 1326 356 324 20 81 chr13 97150040 97150188 -23134124 + MER5A DNA MER1_type 29 167 -22 2 1326 379 127 9 5 chr13 97150263 97150334 -23133978 + B1_Mus2 SINE Alu 50 140 -7 2 1326 864 0 0 0 chr13 97150334 97150430 -23133882 + (GAA)n Simple_repeat Simple_repeat 2 97 0 2 1326 325 206 48 0 chr13 97150595 97150658 -23133654 + B3A SINE B2 3 68 -130 2 1326 328 237 29 23 chr13 97151233 97151336 -23132976 - ID4_ SINE ID -48 104 6 2 1326 215 288 0 0 chr13 97151343 97151409 -23132903 - B1F SINE Alu -5 144 79 2 1326 892 189 0 0 chr13 97151882 97152025 -23132287 + B1_Mus1 SINE Alu 1 143 -5 2 1326 530 230 11 11 chr13 97152048 97152224 -23132088 + GA-rich Low_complexity Low_complexity 3 178 0 2 1326 1134 263 117 12 chr13 97152659 97153001 -23131311 + MTE2a LTR MaLR 1 378 -1 2 1326 405 39 0 0 chr13 97154181 97154232 -23130080 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1326 1547 147 11 11 chr13 97154291 97154552 -23129760 + Lx LINE L1 6393 6653 -1 2 1326 420 328 75 31 chr13 97155043 97155298 -23129014 + L2 LINE L2 2319 2584 -835 2 1326 1152 121 17 14 chr13 97155771 97155969 -23128343 + LTRIS2 LTR ERV1 391 587 0 2 1326 693 234 0 28 chr13 97156140 97156285 -23128027 + B4A SINE B4 148 288 -4 2 1326 433 253 47 173 chr13 97156325 97156794 -23127518 + RMER17C LTR ERVK 1 410 0 2 1326 497 235 9 47 chr13 97156959 97157066 -23127246 + RSINE1 SINE B4 3 105 -60 2 1326 360 0 0 0 chr13 97157071 97157111 -23127201 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1326 378 0 0 0 chr13 97157111 97157152 -23127160 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 1326 209 33 33 0 chr13 97157774 97157804 -23126508 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1326 765 306 79 24 chr13 97159902 97160193 -23124119 - MER2 DNA MER2_type -6 339 33 2 1326 356 232 28 126 chr13 97161608 97161751 -23122561 + MT2B LTR ERVL 108 236 -365 2 1326 611 185 49 49 chr13 97161679 97161821 -23122491 + B1_Mur2 SINE Alu 7 148 -1 2 1326 21 0 0 0 chr13 97162981 97163002 -23121310 + AT_rich Low_complexity Low_complexity 1 21 0 2 1326 292 268 24 24 chr13 97163565 97163649 -23120663 - B4 SINE B4 -207 85 2 2 1326 215 171 0 0 chr13 97163724 97163759 -23120553 + B1_Mus1 SINE Alu 1 35 -113 2 1326 299 262 78 0 chr13 97163784 97163887 -23120425 + L1M2 LINE L1 5600 5710 -581 2 1326 1524 73 16 5 chr13 97164213 97164406 -23119906 + B2_Mm2 SINE B2 1 195 0 2 1326 318 304 78 0 chr13 97165395 97165497 -23118815 + PB1D10 SINE Alu 5 114 -3 2 1326 213 121 0 0 chr13 97166867 97166900 -23117412 + (TTCC)n Simple_repeat Simple_repeat 3 35 0 2 1326 286 355 35 21 chr13 97166989 97167130 -23117182 - MER5A1 DNA MER1_type -3 163 21 2 1326 211 327 0 0 chr13 97167266 97167318 -23116994 + FLAM_A SINE Alu 15 66 -229 2 1326 320 200 44 0 chr13 97167492 97167582 -23116730 + B3A SINE B2 3 96 -102 2 1326 816 239 55 0 chr13 97168171 97168372 -23115940 - B3 SINE B2 0 216 5 2 1326 462 215 43 71 chr13 97169363 97169503 -23114809 - B1F SINE Alu -2 147 12 2 1326 228 233 80 23 chr13 97169664 97169752 -23114560 - L1ME3B LINE L1 -59 6181 6089 2 1326 346 257 36 45 chr13 97169778 97169888 -23114424 + PB1D10 SINE Alu 7 115 -2 2 1326 294 298 11 0 chr13 97170390 97170484 -23113828 + B1_Mm SINE Alu 2 96 -51 2 1326 23 0 0 0 chr13 97171111 97171134 -23113178 + AT_rich Low_complexity Low_complexity 1 23 0 2 1326 210 183 179 24 chr13 97171202 97171286 -23113026 + PB1 SINE Alu 24 120 -7 2 1326 424 130 26 0 chr13 97171389 97171466 -23112846 - RMER19A LTR ERVK 0 737 659 2 1326 747 226 214 16 chr13 97172060 97172303 -23112009 + B4 SINE B4 2 292 0 2 1326 425 216 155 0 chr13 97172603 97172719 -23111593 + ID_B1 SINE B4 84 217 -7 2 1326 279 253 80 11 chr13 97175341 97175429 -23108883 - PB1D7 SINE Alu -12 108 15 2 1326 276 217 33 0 chr13 97176257 97176317 -23107995 + Lx6 LINE L1 7083 7144 -316 2 1326 219 88 0 0 chr13 97176319 97176353 -23107959 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 2 1326 234 152 0 42 chr13 97176365 97176413 -23107899 + T-rich Low_complexity Low_complexity 1 46 0 2 1326 440 141 0 0 chr13 97176433 97176504 -23107808 - B1_Mus2 SINE Alu -1 146 76 2 1326 1439 141 60 11 chr13 97176505 97176770 -23107542 + Lx7 LINE L1 7419 7696 0 2 1326 342 0 0 0 chr13 97176784 97176822 -23107490 + (TG)n Simple_repeat Simple_repeat 2 39 0 2 1326 252 179 34 51 chr13 97177256 97177315 -23106997 - MIRb SINE MIR -96 172 115 2 1326 21 0 0 0 chr13 97177546 97177567 -23106745 + AT_rich Low_complexity Low_complexity 1 21 0 2 1326 522 242 136 6 chr13 97177648 97177810 -23106502 - B3A SINE B2 -15 183 1 2 1326 448 271 8 17 chr13 97178226 97178346 -23105966 - B3A SINE B2 -78 120 2 2 1326 222 118 0 0 chr13 97178685 97178719 -23105593 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 3 1326 661 253 64 84 chr13 97179167 97179465 -23104847 + B4A SINE B4 1 292 0 3 1326 30 0 0 0 chr13 97179984 97180014 -23104298 + AT_rich Low_complexity Low_complexity 1 30 0 3 1326 790 187 154 0 chr13 97181293 97181475 -23102837 - B3 SINE B2 -5 211 2 3 1326 25 51 0 0 chr13 97181519 97181558 -23102754 + AT_rich Low_complexity Low_complexity 1 39 0 3 1326 878 113 14 0 chr13 97181767 97181908 -23102404 + (TTTC)n Simple_repeat Simple_repeat 4 146 0 3 1326 2616 107 65 0 chr13 97181909 97182293 -23102019 - Lx LINE L1 -10 6644 6236 3 1326 229 100 25 0 chr13 97182298 97182338 -23101974 + L1_Mus4 LINE L1 6229 6269 -367 3 1326 809 131 31 0 chr13 97182533 97182663 -23101649 - B1_Mur4 SINE Alu -8 142 9 3 1326 622 219 11 73 chr13 97182663 97182710 -23101602 - ID_B1 SINE B4 -8 216 51 3 1326 1399 67 22 0 chr13 97183059 97183239 -23101073 - B2_Mm2 SINE B2 -10 185 2 3 1326 253 208 274 14 chr13 97183442 97183515 -23100797 - B3 SINE B2 -124 92 1 3 1326 280 279 128 0 chr13 97183880 97183966 -23100346 + PB1D10 SINE Alu 1 97 -20 3 1326 304 208 240 0 chr13 97185323 97185419 -23098893 + PB1D9 SINE Alu 2 120 0 3 1326 914 159 42 47 chr13 97185928 97186119 -23098193 + B2_Mm2 SINE B2 2 191 -4 3 1326 791 232 0 6 chr13 97186191 97186364 -23097948 + B3 SINE B2 30 201 -15 3 1326 227 155 17 17 chr13 97187182 97187241 -23097071 + T-rich Low_complexity Low_complexity 3 61 0 3 1326 2227 159 39 12 chr13 97187878 97188285 -23096027 - MTC LTR MaLR 0 421 4 3 1326 2233 133 70 5 chr13 97189047 97189417 -23094895 + ORR1B1 LTR MaLR 1 394 0 3 1326 378 0 0 0 chr13 97189533 97189575 -23094737 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1326 968 124 6 0 chr13 97191310 97191488 -23092824 + (TAGGG)n Simple_repeat Simple_repeat 1 179 0 3 1326 220 87 65 0 chr13 97192833 97192879 -23091433 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1326 185 395 66 0 chr13 97194813 97194889 -23089423 + MIRb SINE MIR 2 82 -186 3 1326 463 331 60 28 chr13 97194979 97195228 -23089084 + MLT1J LTR MaLR 107 363 -149 3 1326 668 251 116 90 chr13 97195661 97195928 -23088384 - B4 SINE B4 -18 274 1 3 1326 462 36 0 0 chr13 97196462 97196518 -23087794 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1326 567 43 0 0 chr13 97196518 97196587 -23087725 + (TG)n Simple_repeat Simple_repeat 1 70 0 3 1326 541 192 102 62 chr13 97196597 97196725 -23087587 - B1F2 SINE Alu -16 133 1 3 1326 210 143 0 0 chr13 97196767 97196802 -23087510 + (TTG)n Simple_repeat Simple_repeat 2 36 0 3 1326 23 0 0 0 chr13 97197256 97197279 -23087033 + AT_rich Low_complexity Low_complexity 1 23 0 3 1326 336 247 25 0 chr13 97197366 97197447 -23086865 + ID2 SINE ID 1 83 0 3 1326 800 78 20 52 chr13 97197725 97198076 -23086236 + (CA)n Simple_repeat Simple_repeat 1 339 0 3 1326 359 210 72 24 chr13 97198089 97198172 -23086140 + HAL1-3A_ME LINE L1 1975 2061 -797 3 1326 1404 56 45 0 chr13 97199010 97199166 -23085146 + B2_Mm2 SINE B2 2 165 -30 3 1326 237 83 0 0 chr13 97199166 97199202 -23085110 + (TTAA)n Simple_repeat Simple_repeat 1 36 0 3 1326 1404 56 45 0 chr13 97199202 97199224 -23085088 + B2_Mm2 SINE B2 166 187 -8 3 1326 803 191 217 67 chr13 97199234 97199487 -23084825 + B4A SINE B4 2 292 0 3 1326 189 121 0 0 chr13 97199487 97199520 -23084792 + (CA)n Simple_repeat Simple_repeat 1 33 0 3 1326 603 0 0 0 chr13 97199538 97199605 -23084707 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 3 1326 990 71 244 6 chr13 97200002 97200158 -23084154 + B2_Mm2 SINE B2 1 193 -2 3 1326 198 0 0 0 chr13 97200479 97200501 -23083811 + (CCCCCA)n Simple_repeat Simple_repeat 2 23 0 3 1326 360 0 0 0 chr13 97200666 97200706 -23083606 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1326 309 26 0 0 chr13 97200706 97200743 -23083569 + (CA)n Simple_repeat Simple_repeat 1 38 0 3 1326 351 319 34 8 chr13 97200894 97201011 -23083301 + PB1 SINE Alu 1 120 -7 3 1326 245 203 85 0 chr13 97201027 97201086 -23083226 + L1MB3 LINE L1 5928 5991 -192 3 1326 322 181 36 12 chr13 97201093 97201177 -23083135 + L1MB3 LINE L1 6090 6175 -8 3 1326 797 130 253 6 chr13 97201244 97201414 -23082898 + B3 SINE B2 5 216 0 3 1326 201 308 46 0 chr13 97203649 97203714 -23080598 - L2c LINE L2 -223 3164 3097 3 1326 468 283 19 38 chr13 97204379 97204406 -23079906 + ID_B1 SINE B4 67 221 -3 3 1326 720 183 46 0 chr13 97204406 97204537 -23079775 + B1_Mus1 SINE Alu 12 148 0 3 1326 448 266 20 40 chr13 97204564 97204713 -23079599 + B1F2 SINE Alu 4 149 0 3 1326 183 42 0 0 chr13 97205774 97205798 -23078514 + (C)n Simple_repeat Simple_repeat 1 24 0 3 1326 273 315 81 34 chr13 97206150 97206298 -23078014 + MLT1A LTR MaLR 179 333 -41 3 1326 383 304 36 48 chr13 97206928 97207167 -23077145 + MLT1H1 LTR MaLR 31 303 -292 3 1326 1324 151 170 7 chr13 97207444 97207744 -23076568 - ORR1D1 LTR MaLR 0 374 26 3 1326 670 276 21 26 chr13 97207759 97207980 -23076332 + B3A SINE B2 1 216 0 3 1326 284 170 0 0 chr13 97208502 97208549 -23075763 + Lx5 LINE L1 6717 6763 -287 3 1326 376 122 24 35 chr13 97208552 97208637 -23075675 + Lx5 LINE L1 6956 7039 -11 3 1326 25 0 0 0 chr13 97208956 97208981 -23075331 + AT_rich Low_complexity Low_complexity 1 25 0 3 1326 211 237 63 0 chr13 97209085 97209147 -23075165 - L2b LINE L2 -1 3425 3317 3 1326 880 143 7 33 chr13 97209342 97209494 -23074818 + B1_Mur3 SINE Alu 1 148 -1 3 1326 194 0 39 0 chr13 97209499 97209525 -23074787 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 3 1326 1000 193 99 0 chr13 97209834 97210026 -23074286 - B3 SINE B2 -5 211 1 3 1326 593 282 68 55 chr13 97210130 97210438 -23073874 + ORSL-2b DNA Tip100 185 496 -12 3 1326 867 221 81 0 chr13 97210870 97211092 -23073220 + ORR1C2 LTR MaLR 144 383 -1 3 1326 4897 71 8 3 chr13 97211629 97212264 -23072048 + L1Md_F2 LINE L1 5945 6582 0 3 1326 360 0 0 0 chr13 97212851 97212891 -23071421 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1326 357 273 58 29 chr13 97213159 97213418 -23070894 - Lx7 LINE L1 0 7696 7321 3 1326 189 0 0 0 chr13 97213423 97213444 -23070868 + (GA)n Simple_repeat Simple_repeat 2 22 0 3 1326 1315 77 0 0 chr13 97213448 97213631 -23070681 + RMER6B LTR ERVK 1 183 -278 3 1326 524 163 51 0 chr13 97213637 97213735 -23070577 + RMER6B LTR ERVK 354 456 -5 3 1326 255 61 0 0 chr13 97213739 97213772 -23070540 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1326 1093 196 234 12 chr13 97213780 97214032 -23070280 - Lx7 LINE L1 -393 7303 6996 3 1326 185 0 0 39 chr13 97214083 97214109 -23070203 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 3 1326 1496 65 16 0 chr13 97214602 97214788 -23069524 + B2_Mm2 SINE B2 2 190 -5 3 1326 237 338 7 41 chr13 97214809 97214954 -23069358 + L1M5 LINE L1 5546 5685 -439 3 1326 352 235 17 134 chr13 97215091 97215180 -23069132 + MT2B LTR ERVL 87 155 -446 3 1326 629 146 109 0 chr13 97215180 97215290 -23069022 + B1_Mur2 SINE Alu 1 122 -27 3 1326 1316 130 0 9 chr13 97215295 97215512 -23068800 + URR1A DNA MER1_type 12 226 0 3 1326 976 242 14 5 chr13 97216365 97216577 -23067735 - B3 SINE B2 0 216 3 3 1326 242 295 0 103 chr13 97217497 97217614 -23066698 + MTEa LTR MaLR 1 105 -274 3 1326 1643 158 71 87 chr13 97217986 97218366 -23065946 - ORR1C1 LTR MaLR -1 377 4 3 1326 348 43 0 0 chr13 97218410 97218456 -23065856 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1326 258 208 19 0 chr13 97219100 97219153 -23065159 - ID SINE ID -166 58 5 3 1326 970 138 181 0 chr13 97219165 97219353 -23064959 + URR1B DNA MER1_type 1 222 -3 3 1326 226 225 151 27 chr13 97219374 97219447 -23064865 + LTR87 LTR ERVL? 42 123 -501 3 1326 265 396 30 30 chr13 97219550 97219719 -23064593 + MLT1K LTR MaLR 196 364 -231 3 1326 324 182 34 0 chr13 97219951 97220039 -23064273 + (TA)n Simple_repeat Simple_repeat 1 91 0 3 1326 326 268 0 0 chr13 97220259 97220330 -23063982 - MLT1A LTR MaLR -239 135 65 3 1326 757 278 115 13 chr13 97221632 97221945 -23062367 + MER2 DNA MER2_type 1 345 0 3 1326 518 268 35 75 chr13 97222648 97222737 -23061575 - L1MB3 LINE L1 0 6183 6108 3 1326 550 265 65 13 chr13 97222737 97222890 -23061422 - RSINE1 SINE B4 -4 161 1 3 1326 518 268 35 75 chr13 97222890 97223026 -23061286 - L1MB3 LINE L1 -76 6107 5967 3 1326 505 211 29 0 chr13 97223315 97223419 -23060893 + PB1D10 SINE Alu 10 116 -1 3 1326 954 160 0 0 chr13 97223419 97223588 -23060724 + GA-rich Low_complexity Low_complexity 1 169 0 3 1326 1823 128 195 12 chr13 97223697 97224030 -23060282 + ORR1B1 LTR MaLR 1 394 0 3 1326 486 304 77 0 chr13 97225877 97226045 -23058267 + MER20 DNA MER1_type 16 196 -23 3 1326 443 60 15 0 chr13 97227053 97227120 -23057192 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1326 380 225 12 0 chr13 97227123 97227190 -23057122 - B4A SINE B4 -9 283 216 3 1326 551 51 13 0 chr13 97227190 97227269 -23057043 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 3 1326 380 225 12 0 chr13 97227269 97227281 -23057031 - B4A SINE B4 -77 215 204 3 1326 479 258 69 31 chr13 97227299 97227459 -23056853 + L1MD2 LINE L1 22 187 -6360 3 1326 230 316 196 0 chr13 97227718 97227851 -23056461 + L1MD2 LINE L1 772 930 -5617 3 1326 533 217 32 32 chr13 97228574 97228698 -23055614 + B1F2 SINE Alu 21 144 -5 3 1326 276 263 162 54 chr13 97228705 97228880 -23055432 + L1MD2 LINE L1 5535 5734 -843 3 1326 228 333 26 0 chr13 97228880 97228958 -23055354 + ID4 SINE ID 4 83 0 3 1326 276 301 92 61 chr13 97228958 97229169 -23055143 + L1MD2 LINE L1 5735 5947 -895 3 1326 624 345 7 64 chr13 97229326 97229608 -23054704 - B4A SINE B4 -16 276 11 3 1326 230 234 0 0 chr13 97229926 97229990 -23054322 + CT-rich Low_complexity Low_complexity 1 64 0 3 1326 184 279 32 32 chr13 97230300 97230363 -23053949 + MIR SINE MIR 111 173 -89 3 1326 520 223 36 0 chr13 97231061 97231173 -23053139 + PB1D7 SINE Alu 5 120 0 4 1326 1588 52 0 0 chr13 97231477 97231669 -23052643 - B2_Mm1t SINE B2 0 193 2 4 1326 761 203 87 20 chr13 97231827 97232023 -23052289 - B3 SINE B2 -4 212 4 4 1326 301 207 32 16 chr13 97232090 97232213 -23052099 + GA-rich Low_complexity Low_complexity 1 125 0 4 1326 618 39 0 0 chr13 97233022 97233099 -23051213 + (CA)n Simple_repeat Simple_repeat 2 78 0 4 1326 491 118 13 0 chr13 97233385 97233461 -23050851 - B1F2 SINE Alu -32 117 41 4 1326 682 169 88 0 chr13 97233466 97233602 -23050710 - B3 SINE B2 -68 148 1 4 1326 183 80 0 0 chr13 97233711 97233736 -23050576 + (CATA)n Simple_repeat Simple_repeat 2 26 0 4 1326 27 92 0 0 chr13 97233741 97233817 -23050495 + AT_rich Low_complexity Low_complexity 1 76 0 4 1326 888 239 106 12 chr13 97234105 97234351 -23049961 - B4 SINE B4 -19 273 5 4 1326 410 286 51 13 chr13 97234390 97234546 -23049766 - Arthur1B DNA Tip100 -1063 162 1 4 1326 333 0 0 0 chr13 97234834 97234871 -23049441 + (GA)n Simple_repeat Simple_repeat 2 38 0 4 1326 1064 44 82 0 chr13 97235838 97235973 -23048339 + B1_Mus2 SINE Alu 1 146 -1 4 1326 475 16 0 30 chr13 97235984 97236050 -23048262 + (GGAA)n Simple_repeat Simple_repeat 4 67 0 4 1326 230 81 27 0 chr13 97236095 97236132 -23048180 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 1326 300 242 15 0 chr13 97236312 97236378 -23047934 + B3A SINE B2 2 68 -130 4 1326 210 265 0 0 chr13 97236471 97236539 -23047773 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 1326 866 275 96 79 chr13 97236649 97237128 -23047184 + L1MD LINE L1 3972 4463 -1683 4 1326 966 220 0 14 chr13 97237128 97237345 -23046967 + B3 SINE B2 3 216 0 4 1326 866 275 96 79 chr13 97237345 97237482 -23046830 + L1MD LINE L1 4464 4598 -1548 4 1326 2488 182 89 13 chr13 97237503 97238031 -23046281 - RLTR20D LTR ERVK 0 568 1 4 1326 519 314 98 29 chr13 97238035 97238452 -23045860 + L1MD LINE L1 4620 5065 -1081 4 1326 365 72 0 55 chr13 97238473 97238524 -23045788 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1326 1153 62 7 0 chr13 97238524 97238670 -23045642 - B1_Mm SINE Alu 0 147 1 4 1326 365 72 0 55 chr13 97238670 97238691 -23045621 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1326 305 270 183 6 chr13 97238894 97239058 -23045254 + L1M5 LINE L1 5305 5497 -682 4 1326 1075 171 26 111 chr13 97239364 97239845 -23044467 + RMER17C LTR ERVK 80 415 -543 4 1326 26 0 0 0 chr13 97241617 97241643 -23042669 + AT_rich Low_complexity Low_complexity 1 26 0 4 1326 647 199 97 109 chr13 97241643 97241818 -23042494 + B3A SINE B2 2 174 -21 4 1326 896 110 7 27 chr13 97242317 97242467 -23041845 - URR1A DNA MER1_type -1 225 79 4 1326 283 273 0 49 chr13 97243233 97243314 -23040998 - RMER30 DNA MER1_type -27 175 99 4 1326 1233 103 0 0 chr13 97243357 97243817 -23040495 + (TG)n Simple_repeat Simple_repeat 1 460 0 4 1326 469 313 70 19 chr13 97243825 97244095 -23040217 - B4A SINE B4 -8 284 1 4 1326 1063 43 0 0 chr13 97244108 97244246 -23040066 - B1_Mus1 SINE Alu 0 148 11 4 1326 2887 127 114 9 chr13 97244248 97244781 -23039531 + RLTR1D LTR ERV1 1 589 -16 4 1326 2280 75 3 3 chr13 97246487 97246806 -23037506 + ORR1A2 LTR MaLR 1 319 -8 4 1326 558 319 99 109 chr13 97247240 97247624 -23036688 + MER77 LTR ERVL 11 390 -217 4 1326 2128 54 30 20 chr13 97247711 97248015 -23036297 + IAPLTR2b LTR ERVK 1 307 -20 4 1326 545 140 69 17 chr13 97248116 97248133 -23036179 + Lx7 LINE L1 5779 5795 -1901 4 1326 5016 66 71 6 chr13 97248133 97248337 -23035975 - Lx3_Mus LINE L1 -8 7001 6776 4 1326 189 0 0 0 chr13 97248337 97248358 -23035954 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1326 5016 66 71 6 chr13 97248358 97248841 -23035471 - Lx3_Mus LINE L1 -234 6775 6269 4 1326 769 93 9 12 chr13 97248841 97248965 -23035347 + Lx3_Mus LINE L1 5807 5933 -649 4 1326 304 271 38 23 chr13 97249514 97249646 -23034666 + MTD LTR MaLR 206 339 -80 4 1326 253 218 18 0 chr13 97249814 97249869 -23034443 - L1MC4a LINE L1 -1063 6819 6764 4 1326 858 316 60 74 chr13 97249879 97249959 -23034353 + Lx9 LINE L1 7076 7140 -504 4 1326 1500 58 21 0 chr13 97249959 97250150 -23034162 + B2_Mm2 SINE B2 1 195 0 4 1326 858 316 60 74 chr13 97250150 97250441 -23033871 + Lx9 LINE L1 7009 7433 -211 4 1326 333 0 0 0 chr13 97250441 97250478 -23033834 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1326 756 316 60 74 chr13 97250478 97250553 -23033759 + Lx9 LINE L1 7306 7380 -93 4 1326 36 23 0 0 chr13 97250585 97250628 -23033684 + AT_rich Low_complexity Low_complexity 1 43 0 4 1326 889 130 7 58 chr13 97251039 97251194 -23033118 - B1_Mus1 SINE Alu 0 148 2 4 1326 472 268 43 25 chr13 97252579 97252740 -23031572 - RSINE1 SINE B4 0 165 2 4 1326 639 307 62 15 chr13 97253209 97253404 -23030908 - B3 SINE B2 -5 211 8 4 1326 282 29 0 0 chr13 97254907 97254942 -23029370 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1326 394 261 0 0 chr13 97254943 97255054 -23029258 - L1MC1 LINE L1 -175 6158 6048 4 165 3710 107 59 16 chr13 97255058 97255759 -23028553 + RMER6A LTR ERVK 4 756 0 4 1327 512 216 154 0 chr13 97255864 97256026 -23028286 - L1MC1 LINE L1 -445 5888 5702 4 1327 303 93 0 0 chr13 97256679 97256722 -23027590 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 4 1327 394 309 155 12 chr13 97257484 97257891 -23026421 + L1MD3 LINE L1 7531 7995 0 4 1327 212 111 0 22 chr13 97259069 97259115 -23025197 + (CAAAAA)n Simple_repeat Simple_repeat 5 49 0 4 1327 654 207 29 22 chr13 97259448 97259586 -23024726 - B1_Mur1 SINE Alu -5 144 6 4 1327 1168 191 9 0 chr13 97259966 97260181 -23024131 + URR1B DNA MER1_type 1 217 -8 4 1327 878 228 50 10 chr13 97261031 97261230 -23023082 - B3 SINE B2 -6 210 4 4 1327 387 0 0 0 chr13 97261261 97261304 -23023008 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1327 188 331 83 0 chr13 97261754 97261887 -23022425 - L2a LINE L2 -1 3425 3282 4 1327 295 286 0 0 chr13 97261900 97261977 -23022335 + ID4 SINE ID 5 81 -2 4 1327 461 254 33 17 chr13 97262041 97262161 -23022151 + B1F SINE Alu 26 147 -2 4 1327 248 250 0 0 chr13 97262172 97262220 -23022092 + tRNA-Ala-GCA tRNA tRNA 1 48 -27 4 1327 238 297 40 0 chr13 97262220 97262246 -23022066 + ID4_ SINE ID 7 83 0 4 1327 271 42 0 78 chr13 97262248 97262299 -23022013 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 4 1327 221 146 0 89 chr13 97262709 97262754 -23021558 - PB1D7 SINE Alu -14 106 66 4 1327 548 133 507 0 chr13 97265146 97265296 -23019016 - URR1A DNA MER1_type 0 226 1 4 1327 2997 64 34 22 chr13 97267690 97268105 -23016207 - L1_Mus2 LINE L1 0 6566 6147 4 1327 22 56 0 0 chr13 97268345 97268381 -23015931 + AT_rich Low_complexity Low_complexity 1 36 0 4 1327 358 255 28 56 chr13 97268471 97268587 -23015725 - B1F SINE Alu -21 126 15 4 1327 415 200 24 0 chr13 97268674 97268759 -23015553 + PB1D9 SINE Alu 2 88 -32 4 1327 711 115 8 15 chr13 97268766 97268898 -23015414 + (GAAA)n Simple_repeat Simple_repeat 2 132 0 4 1327 544 140 256 58 chr13 97270227 97270348 -23013964 + B1_Mm SINE Alu 2 146 -1 4 1327 296 46 0 84 chr13 97270349 97270420 -23013892 + (CAAAA)n Simple_repeat Simple_repeat 1 65 0 4 1327 447 249 23 24 chr13 97270764 97270921 -23013391 + B4A SINE B4 5 158 -134 4 1327 251 301 29 41 chr13 97273278 97273450 -23010862 + B2_Mm2 SINE B2 20 191 -25 4 1327 274 220 9 0 chr13 97273512 97273582 -23010730 - B1F SINE Alu -28 121 21 4 1327 328 235 255 4 chr13 97273900 97273999 -23010313 + B1F SINE Alu 1 114 -35 4 1327 27 29 0 0 chr13 97274015 97274049 -23010263 + AT_rich Low_complexity Low_complexity 1 34 0 4 1327 314 322 0 11 chr13 97274837 97274931 -23009381 + PB1D7 SINE Alu 5 97 -23 4 1327 23 0 0 0 chr13 97274939 97274962 -23009350 + AT_rich Low_complexity Low_complexity 1 23 0 4 1327 258 149 57 11 chr13 97274979 97275067 -23009245 + (TA)n Simple_repeat Simple_repeat 2 93 0 4 1327 664 225 80 65 chr13 97276060 97276260 -23008052 + B3 SINE B2 10 212 -4 4 1327 362 332 76 43 chr13 97277622 97277833 -23006479 - MER58A DNA MER1_type -2 222 5 4 1327 339 85 0 0 chr13 97278418 97278465 -23005847 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 4 1327 792 264 48 4 chr13 97278600 97278870 -23005442 - B4A SINE B4 -6 286 5 4 1327 1529 171 168 3 chr13 97279226 97279584 -23004728 - MTC LTR MaLR 0 421 5 4 1327 258 360 44 37 chr13 97281225 97281394 -23002918 - MIRm SINE MIR -75 193 25 4 1327 557 179 101 2 chr13 97281444 97281569 -23002743 - B1_Mur4 SINE Alu -2 148 13 4 1327 1980 287 47 29 chr13 97282551 97283614 -23000698 + L1MC1 LINE L1 5165 6253 -80 4 1327 478 268 92 29 chr13 97284199 97284372 -22999940 + MLT1J LTR MaLR 12 195 -317 4 1327 358 312 0 0 chr13 97285462 97285571 -22998741 + PB1D7 SINE Alu 1 109 -11 4 1327 192 269 116 36 chr13 97285714 97285826 -22998486 + MIR SINE MIR 19 139 -123 4 1327 902 277 57 29 chr13 97287219 97287582 -22996730 - L1M4 LINE L1 -417 5767 5390 4 1327 3442 28 2 0 chr13 97287582 97287977 -22996335 + MTA_Mm LTR MaLR 1 396 0 4 1327 902 277 57 29 chr13 97287977 97288066 -22996246 - L1M4 LINE L1 -795 5389 5302 4 1327 313 278 70 77 chr13 97288231 97288297 -22996015 + L1MC LINE L1 5622 5687 -2195 4 1327 670 194 104 0 chr13 97288297 97288431 -22995881 + B1_Mur2 SINE Alu 1 148 -1 4 1327 313 278 70 77 chr13 97288431 97288520 -22995792 + L1MC LINE L1 5688 5776 -2106 4 1327 188 0 74 0 chr13 97288714 97288741 -22995571 + (TTTTTA)n Simple_repeat Simple_repeat 4 32 0 4 1327 1219 54 0 0 chr13 97288741 97288888 -22995424 - B1_Mm SINE Alu 0 147 1 4 1327 23 0 0 0 chr13 97288888 97288911 -22995401 + AT_rich Low_complexity Low_complexity 1 23 0 4 1327 726 293 32 5 chr13 97289190 97289406 -22994906 + ID_B1 SINE B4 2 223 -1 5 1327 851 158 7 33 chr13 97289437 97289588 -22994724 + B1_Mur4 SINE Alu 1 147 -3 5 1327 6073 236 46 48 chr13 97289988 97290015 -22994297 - Lx7 LINE L1 -276 7420 7398 5 1327 396 0 0 0 chr13 97290015 97290059 -22994253 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1327 13219 201 61 31 chr13 97290059 97294574 -22989738 - Lx7 LINE L1 -299 7397 2748 5 1327 1537 57 0 5 chr13 97294574 97294769 -22989543 - B2_Mm2 SINE B2 0 195 2 5 1327 13219 182 68 22 chr13 97294769 97295074 -22989238 - Lx7 LINE L1 -3133 2747 2439 5 1327 587 269 20 7 chr13 97295369 97295515 -22988797 + RSINE1 SINE B4 5 152 -13 5 1327 210 174 22 0 chr13 97295524 97295570 -22988742 + (CAGA)n Simple_repeat Simple_repeat 4 50 0 5 1327 1133 49 0 7 chr13 97295610 97295754 -22988558 + B1_Mus2 SINE Alu 5 147 0 5 1327 4909 83 25 0 chr13 97296193 97296865 -22987447 - Lx3A LINE L1 -7 6974 6286 5 1327 407 274 0 17 chr13 97296933 97297048 -22987264 + PB1D10 SINE Alu 3 115 -2 5 1327 541 323 76 19 chr13 97297882 97298144 -22986168 + L2a LINE L2 2530 2806 -613 5 1327 197 130 43 0 chr13 97298178 97298224 -22986088 + (CGTG)n Simple_repeat Simple_repeat 4 51 0 5 1327 679 293 31 66 chr13 97298232 97298488 -22985824 - B4A SINE B4 -1 291 45 5 1327 391 299 26 157 chr13 97298495 97298646 -22985666 + L2a LINE L2 2772 2924 -495 5 1327 741 214 14 20 chr13 97298646 97298794 -22985518 + B1_Mur2 SINE Alu 2 148 -1 5 1327 412 309 24 119 chr13 97298794 97299112 -22985200 + L2a LINE L2 2917 3186 -240 5 1327 289 241 35 35 chr13 97299282 97299368 -22984944 + MTE2b LTR MaLR 239 324 -55 5 1327 376 197 14 0 chr13 97301266 97301337 -22982975 + ORR1C2 LTR MaLR 1 72 -302 5 1327 619 206 134 12 chr13 97301330 97301502 -22982810 + ORR1C2 LTR MaLR 187 379 -5 5 1327 225 280 143 63 chr13 97301512 97301524 -22982788 - B4A SINE B4 -67 225 91 5 1327 329 240 26 80 chr13 97301524 97301637 -22982675 - PB1D9 SINE Alu -8 112 6 5 1327 273 250 141 0 chr13 97301765 97301829 -22982483 - ID_B1 SINE B4 -58 166 94 5 1327 475 250 246 66 chr13 97302115 97302186 -22982126 - B4 SINE B4 -2 290 222 5 1327 715 246 136 30 chr13 97302186 97302450 -22981862 - B4 SINE B4 0 292 1 5 1327 475 250 246 66 chr13 97302450 97302622 -22981690 - B4 SINE B4 -71 221 3 5 1327 1594 184 8 70 chr13 97303307 97303693 -22980619 + Lx LINE L1 6289 6650 -4 5 1327 290 231 101 13 chr13 97304075 97304154 -22980158 + PB1D10 SINE Alu 30 115 -2 5 1327 535 112 10 4 chr13 97305245 97305336 -22978976 - B1_Mus2 SINE Alu -5 144 51 5 1327 273 242 45 41 chr13 97305868 97305966 -22978346 + B1_Mur4 SINE Alu 2 114 -6 5 1327 29 47 0 0 chr13 97306461 97306504 -22977808 + AT_rich Low_complexity Low_complexity 1 43 0 5 1327 295 153 65 58 chr13 97306504 97306643 -22977669 + (TTAAA)n Simple_repeat Simple_repeat 1 140 0 5 1327 351 0 0 0 chr13 97306930 97306969 -22977343 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1327 240 316 53 0 chr13 97307653 97307729 -22976583 + Kanga1b DNA Tc2 83 162 -617 5 1327 271 275 0 80 chr13 97307716 97307791 -22976521 + B4 SINE B4 77 145 -147 5 1327 373 200 222 0 chr13 97307738 97307828 -22976484 + PB1D7 SINE Alu 8 117 0 5 1327 398 182 33 43 chr13 97308217 97308309 -22976003 - PB1D10 SINE Alu -1 116 26 5 1327 228 268 40 40 chr13 97308460 97308534 -22975778 + MamRep1161 DNA TcMar 86 159 -798 5 1327 223 360 79 26 chr13 97308798 97308912 -22975400 + MIR SINE MIR 22 141 -121 5 1327 455 318 25 19 chr13 97309226 97309383 -22974929 + MIRc SINE MIR 48 205 -63 5 1327 899 294 39 35 chr13 97309540 97309557 -22974755 - B4A SINE B4 -1 291 275 5 1327 306 0 0 0 chr13 97309557 97309591 -22974721 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1327 899 294 39 35 chr13 97309591 97309858 -22974454 - B4A SINE B4 -18 274 6 5 1327 326 288 93 27 chr13 97309964 97310114 -22974198 + L1M5 LINE L1 4747 4906 -1240 5 1327 844 153 0 21 chr13 97310124 97310255 -22974057 + B1_Mus1 SINE Alu 11 139 -9 5 1327 411 21 0 0 chr13 97310255 97310303 -22974009 + (CAAAC)n Simple_repeat Simple_repeat 2 49 0 5 1327 1113 58 0 0 chr13 97310321 97310458 -22973854 + B1_Mus2 SINE Alu 2 138 -9 5 1327 279 0 0 0 chr13 97310541 97310572 -22973740 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1327 243 0 0 0 chr13 97311284 97311311 -22973001 + (TC)n Simple_repeat Simple_repeat 2 28 0 5 1327 207 0 0 0 chr13 97311311 97311333 -22972979 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1327 248 235 9 38 chr13 97312586 97312692 -22971620 + GA-rich Low_complexity Low_complexity 1 103 0 5 1327 30 0 0 0 chr13 97312943 97312973 -22971339 + GC_rich Low_complexity Low_complexity 1 30 0 5 1327 411 21 0 0 chr13 97314014 97314062 -22970250 + (TTTC)n Simple_repeat Simple_repeat 2 49 0 5 1327 1318 105 11 0 chr13 97314586 97314777 -22969535 - B2_Mm1t SINE B2 0 193 1 5 1327 924 155 0 7 chr13 97314921 97315070 -22969242 - B1_Mur4 SINE Alu -2 148 1 5 1327 314 296 11 54 chr13 97315225 97315318 -22968994 + PB1D10 SINE Alu 26 114 -3 5 1327 707 140 9 2 chr13 97315438 97315565 -22968747 + B1_Mur2 SINE Alu 22 147 -2 5 1327 225 268 0 0 chr13 97315565 97315621 -22968691 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 5 1327 1059 289 41 38 chr13 97315666 97315957 -22968355 - B4A SINE B4 0 292 1 5 1327 250 329 0 76 chr13 97315977 97316069 -22968243 - ID SINE ID -135 89 5 5 1327 259 23 45 23 chr13 97316374 97316418 -22967894 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1327 1018 67 0 22 chr13 97316418 97316556 -22967756 - B1_Mus2 SINE Alu 0 147 13 5 1327 497 259 81 87 chr13 97316424 97316585 -22967727 - B4 SINE B4 -69 223 64 5 1327 525 285 0 8 chr13 97316768 97316892 -22967420 - B1_Mur1 SINE Alu -26 123 1 5 1327 309 331 90 58 chr13 97316892 97316959 -22967353 - ID SINE ID -147 77 5 5 1327 181 327 18 18 chr13 97319310 97319366 -22964946 - L2b LINE L2 -15 3360 3305 5 1327 651 81 46 11 chr13 97319688 97319804 -22964508 - B1_Mur4 SINE Alu 0 150 11 5 1327 314 352 94 51 chr13 97319963 97320238 -22964074 - Tigger13a DNA MER2_type -475 296 10 5 1327 1204 28 0 14 chr13 97320321 97320466 -22963846 - B1_Mus1 SINE Alu -4 144 2 5 1327 27 0 0 0 chr13 97320843 97320870 -22963442 + AT_rich Low_complexity Low_complexity 1 27 0 5 1327 23 0 0 0 chr13 97321420 97321443 -22962869 + AT_rich Low_complexity Low_complexity 1 23 0 5 1327 309 330 0 10 chr13 97321609 97321707 -22962605 - PB1D10 SINE Alu -14 103 7 5 1327 294 343 38 0 chr13 97322118 97322223 -22962089 + PB1D7 SINE Alu 2 110 -10 5 1327 450 0 0 0 chr13 97322223 97322273 -22962039 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1327 22 75 0 15 chr13 97322297 97322311 -22962001 + AT_rich Low_complexity Low_complexity 1 14 0 5 1327 1212 48 0 7 chr13 97322311 97322459 -22961853 - B1_Mus2 SINE Alu 0 147 1 5 1327 22 75 0 15 chr13 97322459 97322512 -22961800 + AT_rich Low_complexity Low_complexity 1 53 0 5 1327 434 245 9 78 chr13 97322750 97322865 -22961447 + PB1D7 SINE Alu 12 118 -2 5 1327 729 194 77 20 chr13 97323067 97323262 -22961050 - B3 SINE B2 -9 207 2 5 1327 25 83 0 0 chr13 97323527 97323587 -22960725 + AT_rich Low_complexity Low_complexity 1 60 0 5 1327 282 280 11 103 chr13 97324030 97324205 -22960107 + RSINE1 SINE B4 1 159 -6 5 1327 4586 203 120 12 chr13 97324415 97325539 -22958773 - Lx7 LINE L1 -33 7663 6419 5 1327 812 258 88 0 chr13 97325630 97325847 -22958465 - MLT1C LTR MaLR -231 236 1 5 1327 1388 269 110 18 chr13 97326024 97326535 -22957777 - Lx8 LINE L1 -4 7469 6912 5 1327 22 35 0 0 chr13 97326587 97326616 -22957696 + AT_rich Low_complexity Low_complexity 1 29 0 5 1327 22 0 0 0 chr13 97326724 97326746 -22957566 + AT_rich Low_complexity Low_complexity 1 22 0 5 1327 323 200 17 0 chr13 97326777 97326837 -22957475 + BC1_Mm scRNA scRNA 1 61 -91 5 1327 429 284 33 33 chr13 97326877 97326997 -22957315 - ID_B1 SINE B4 -96 128 9 5 1327 270 0 0 0 chr13 97327185 97327215 -22957097 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 5 1327 306 0 0 0 chr13 97327352 97327386 -22956926 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1327 384 22 0 0 chr13 97327472 97327517 -22956795 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1327 1600 175 158 17 chr13 97327601 97327962 -22956350 - MTC LTR MaLR -8 413 2 5 1327 668 282 102 10 chr13 97327965 97328162 -22956150 - B4A SINE B4 -77 215 1 5 1327 185 311 62 47 chr13 97329417 97329481 -22954831 - L2 LINE L2 -2672 747 683 5 1327 1236 300 70 74 chr13 97329610 97329810 -22954502 + L1_Rod LINE L1 4576 4795 -1052 5 1327 378 0 0 0 chr13 97329810 97329852 -22954460 + (TTTTG)n Simple_repeat Simple_repeat 3 44 0 5 1327 1159 76 0 0 chr13 97329857 97330002 -22954310 - B1_Mus2 SINE Alu -1 146 2 5 1327 1236 300 70 74 chr13 97330002 97331072 -22953240 + L1_Rod LINE L1 4796 5847 0 5 1327 1551 48 0 11 chr13 97331102 97331293 -22953019 - B2_Mm1a SINE B2 -3 190 2 5 1327 449 221 169 69 chr13 97331551 97331711 -22952601 + B3 SINE B2 1 176 -19 5 1327 1356 55 11 21 chr13 97331730 97331916 -22952396 - B2_Mm2 SINE B2 -10 185 2 5 1327 435 189 8 16 chr13 97332673 97332797 -22951515 + (TA)n Simple_repeat Simple_repeat 2 124 0 5 1327 302 281 24 0 chr13 97332831 97332913 -22951399 + Charlie4 DNA MER1_type 1837 1920 -41 5 1327 831 124 22 0 chr13 97332962 97333099 -22951213 - URR1B DNA MER1_type -3 222 83 5 1327 341 248 16 16 chr13 97333625 97333748 -22950564 - L1MA5 LINE L1 -17 6283 6161 5 1327 204 308 187 42 chr13 97333946 97334112 -22950200 + L2a LINE L2 3220 3409 -17 5 1327 582 230 174 32 chr13 97334168 97334450 -22949862 - MER33 DNA MER1_type -8 316 1 5 1327 511 186 58 17 chr13 97335108 97335228 -22949084 - B2_Mm2 SINE B2 -70 125 1 6 1327 225 83 0 0 chr13 97335325 97335361 -22948951 + (T)n Simple_repeat Simple_repeat 1 36 0 6 1327 28 0 0 0 chr13 97335925 97335953 -22948359 + AT_rich Low_complexity Low_complexity 1 28 0 6 1327 389 295 42 135 chr13 97336020 97336212 -22948100 + RMER30 DNA MER1_type 12 185 -17 6 1327 844 256 59 59 chr13 97337230 97337520 -22946792 + B4A SINE B4 3 292 0 6 1327 331 235 71 0 chr13 97338845 97338930 -22945382 - BC1_Mm scRNA scRNA -54 98 8 6 1327 335 256 16 79 chr13 97338932 97339059 -22945253 - ID_B1 SINE B4 0 224 106 6 1327 223 281 56 37 chr13 97339130 97339237 -22945075 + B4 SINE B4 51 159 -133 6 1327 1251 247 91 16 chr13 97340539 97341047 -22943265 - Lx5 LINE L1 -5 7053 6487 6 1327 236 235 81 12 chr13 97341206 97341292 -22943020 - Lx8 LINE L1 -224 7249 7158 6 1327 225 0 0 0 chr13 97341357 97341382 -22942930 + (TTA)n Simple_repeat Simple_repeat 3 27 0 6 1327 1080 90 7 0 chr13 97341403 97341548 -22942764 - B1_Mus2 SINE Alu -1 146 1 6 1327 1978 172 64 120 chr13 97342819 97343379 -22940933 - RLTR24 LTR ERV1 0 529 1 6 1327 1197 48 0 0 chr13 97343402 97343549 -22940763 + B1_Mus2 SINE Alu 1 147 0 6 1327 37 39 0 0 chr13 97343689 97343740 -22940572 + AT_rich Low_complexity Low_complexity 1 51 0 6 1327 384 221 51 34 chr13 97343764 97343881 -22940431 - PB1D9 SINE Alu -1 119 1 6 1327 290 26 0 25 chr13 97344755 97344795 -22939517 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1327 704 172 32 65 chr13 97346353 97346508 -22937804 - B1_Mur4 SINE Alu 0 150 1 6 1327 363 266 11 11 chr13 97347448 97347543 -22936769 - MIR SINE MIR -131 131 37 6 1327 2535 143 55 9 chr13 97348537 97348973 -22935339 - RMER6B LTR ERVK -5 456 1 6 1327 880 85 0 0 chr13 97348976 97349094 -22935218 - MYSERV6-int LTR ERVK -1195 7764 7647 6 1327 720 0 0 0 chr13 97349781 97349861 -22934451 + (GAAA)n Simple_repeat Simple_repeat 3 82 0 6 1327 1248 318 110 45 chr13 97351731 97352168 -22932144 + L1M4c LINE L1 13 476 -5908 6 1327 783 182 220 6 chr13 97352168 97352345 -22931967 - B3 SINE B2 -1 215 1 6 1327 1248 318 110 45 chr13 97352345 97352797 -22931515 + L1M4c LINE L1 477 960 -5424 6 1327 1171 182 192 7 chr13 97352880 97353151 -22931161 - MT2A LTR ERVL -209 324 4 6 1327 452 228 136 34 chr13 97353162 97353329 -22930983 + ORR1D2 LTR MaLR 171 355 -15 6 1327 2053 268 116 58 chr13 97353329 97354211 -22930101 + ORR1D2-int LTR MaLR 1 933 -437 6 1327 1893 312 45 37 chr13 97354212 97355147 -22929165 + Lx9 LINE L1 6595 7536 -108 6 1327 1351 302 90 26 chr13 97355182 97355725 -22928587 + ORR1D2-int LTR MaLR 793 1370 0 6 1327 808 244 64 5 chr13 97355740 97355942 -22928370 - B3 SINE B2 0 216 3 6 1327 470 184 0 13 chr13 97355947 97356043 -22928269 + ORR1D2 LTR MaLR 4 98 -261 6 1327 22 35 0 0 chr13 97356293 97356322 -22927990 + AT_rich Low_complexity Low_complexity 1 29 0 6 1327 773 223 52 21 chr13 97356393 97356585 -22927727 - ORR1D1 LTR MaLR 0 374 177 6 1327 979 298 16 65 chr13 97356615 97357043 -22927269 - BGLII_B LTR ERVK -27 414 8 6 1327 510 200 10 10 chr13 97357086 97357182 -22927130 - ORR1D1 LTR MaLR -278 96 1 6 1327 5224 186 83 91 chr13 97357182 97357328 -22926984 - ORR1D1-int LTR MaLR 0 1370 1222 6 1327 5560 42 0 0 chr13 97357328 97357995 -22926317 - L1Md_T LINE L1 0 6582 5916 6 1327 5224 186 83 91 chr13 97357995 97358027 -22926285 - ORR1D1-int LTR MaLR -149 1221 1196 6 1327 1076 64 50 0 chr13 97358027 97358167 -22926145 + B1_Mm SINE Alu 1 147 0 6 1327 5224 186 83 91 chr13 97358167 97359265 -22925047 - ORR1D1-int LTR MaLR -175 1195 101 6 1327 4661 124 39 8 chr13 97359265 97359316 -22924996 - Lx4A LINE L1 0 7058 6997 6 1327 189 0 0 0 chr13 97359316 97359337 -22924975 + (CA)n Simple_repeat Simple_repeat 2 22 0 6 1327 4661 124 39 8 chr13 97359337 97360025 -22924287 - Lx4A LINE L1 -62 6996 6296 6 1327 5224 186 83 91 chr13 97360025 97360125 -22924187 - ORR1D1-int LTR MaLR -1270 100 5 6 1327 1571 217 27 19 chr13 97360126 97360497 -22923815 - ORR1D1 LTR MaLR 0 374 1 6 1327 747 212 60 80 chr13 97360555 97360755 -22923557 + B3A SINE B2 1 196 -2 6 1327 329 316 76 5 chr13 97360767 97360964 -22923348 + L1M3 LINE L1 4480 4690 -1450 6 1327 640 242 79 18 chr13 97361030 97361194 -22923118 - RMER30 DNA MER1_type -22 180 7 6 1327 2124 58 89 0 chr13 97361198 97361491 -22922821 - ORR1A2 LTR MaLR -8 319 1 6 1327 321 279 38 9 chr13 97361846 97361951 -22922361 + L1MB2 LINE L1 5972 6079 -92 6 1327 207 0 0 0 chr13 97361951 97361974 -22922338 + (TG)n Simple_repeat Simple_repeat 2 24 0 6 1327 265 270 173 8 chr13 97361974 97361995 -22922317 + L1MB2 LINE L1 6098 6118 -71 6 1327 225 289 40 30 chr13 97363046 97363146 -22921166 - B3A SINE B2 -7 191 91 6 1327 187 122 20 20 chr13 97363856 97363906 -22920406 + T-rich Low_complexity Low_complexity 6 55 0 6 1327 5103 114 28 0 chr13 97364090 97364872 -22919440 - Lx4A LINE L1 0 7058 6255 6 1327 474 152 38 0 chr13 97364885 97364990 -22919322 - RMER1B Other Other 0 1066 958 6 1327 378 0 0 0 chr13 97365025 97365067 -22919245 + (GGAAA)n Simple_repeat Simple_repeat 1 42 0 6 1327 1110 188 33 19 chr13 97366980 97367192 -22917120 - B3 SINE B2 0 216 2 6 1327 265 183 85 0 chr13 97367582 97367668 -22916644 + B2_Mm2 SINE B2 2 94 -122 6 1327 21 36 0 0 chr13 97368106 97368134 -22916178 + AT_rich Low_complexity Low_complexity 1 28 0 6 1327 531 266 29 81 chr13 97368379 97368551 -22915761 - RSINE1 SINE B4 0 165 3 6 1327 325 209 102 25 chr13 97368621 97368739 -22915573 - LTR37A LTR ERV1 -18 408 282 6 1327 277 362 51 0 chr13 97368869 97369007 -22915305 - LTR37A LTR ERV1 -224 202 58 6 1327 195 42 0 0 chr13 97369934 97369958 -22914354 + (GAAA)n Simple_repeat Simple_repeat 4 27 0 6 1327 800 151 27 0 chr13 97370041 97370187 -22914125 - B1_Mur4 SINE Alu 0 150 1 6 1327 463 253 37 37 chr13 97370398 97370587 -22913725 - L1MEc LINE L1 -4198 2202 2014 6 1327 361 277 68 23 chr13 97370577 97370710 -22913602 - L1MEc LINE L1 -5766 634 496 6 1327 434 267 64 45 chr13 97370891 97371048 -22913264 - L1MEc LINE L1 -6182 218 59 6 1327 342 234 122 0 chr13 97371053 97371160 -22913152 + RMER12 LTR ERVK 717 836 -486 6 1327 1271 20 0 0 chr13 97371179 97371326 -22912986 - B1_Mm SINE Alu 0 147 1 6 1327 248 283 19 0 chr13 97371411 97371464 -22912848 + ID4_ SINE ID 16 69 -14 6 1327 1297 43 0 0 chr13 97371538 97371702 -22912610 - L1_Mm LINE L1 -1506 4377 4214 6 1327 26 0 0 0 chr13 97372114 97372140 -22912172 + AT_rich Low_complexity Low_complexity 1 26 0 6 1327 427 141 0 0 chr13 97372473 97372544 -22911768 - ORR1B1 LTR MaLR 0 394 324 6 1327 301 329 0 12 chr13 97372692 97372775 -22911537 - RSINE1 SINE B4 -70 95 14 6 1327 444 235 233 7 chr13 97373919 97374069 -22910243 - MTC LTR MaLR -235 186 3 6 1327 757 313 73 4 chr13 97374070 97374330 -22909982 + B4A SINE B4 15 292 0 6 1327 1346 66 66 0 chr13 97374551 97374732 -22909580 + B2_Mm2 SINE B2 2 194 -1 6 1327 281 267 37 74 chr13 97374859 97374940 -22909372 + ID4 SINE ID 6 83 0 6 1327 5486 187 69 26 chr13 97374946 97376133 -22908179 - Lx2B LINE L1 -17 6983 5746 6 1327 8560 126 59 5 chr13 97376132 97377604 -22906708 + Lx6 LINE L1 4215 5770 -1690 6 1327 251 286 62 9 chr13 97377621 97377734 -22906578 + L1M4 LINE L1 4242 4360 -1786 6 1327 413 311 88 23 chr13 97377776 97377947 -22906365 - B3A SINE B2 -15 183 2 6 1327 389 295 148 0 chr13 97377957 97378079 -22906233 - B1F SINE Alu -8 141 2 6 1327 273 243 159 14 chr13 97378168 97378365 -22905947 + L1MB7 LINE L1 5953 6179 -5 6 1327 601 258 71 29 chr13 97378567 97378807 -22905505 - L1ME2 LINE L1 -326 5838 5589 6 1327 324 189 180 8 chr13 97378791 97378919 -22905393 - L1MD LINE L1 -2522 5473 5324 6 1327 234 267 192 40 chr13 97380419 97380544 -22903768 - MIR3 SINE MIR -6 202 59 6 1327 472 232 71 21 chr13 97380812 97380953 -22903359 - Tigger7 DNA MER2_type -27 2464 2317 6 1327 24 32 0 0 chr13 97381314 97381345 -22902967 + AT_rich Low_complexity Low_complexity 1 31 0 6 1327 22 0 0 0 chr13 97381447 97381469 -22902843 + AT_rich Low_complexity Low_complexity 1 22 0 6 1327 537 121 0 0 chr13 97382109 97382192 -22902120 + (TC)n Simple_repeat Simple_repeat 1 83 0 6 1327 224 165 40 93 chr13 97382457 97382563 -22901749 + PB1D10 SINE Alu 1 107 -13 6 1327 302 214 79 0 chr13 97382704 97382793 -22901519 - PB1 SINE Alu -4 123 28 6 1327 668 285 38 10 chr13 97382963 97383172 -22901140 - B3 SINE B2 -1 215 1 6 1327 336 177 150 12 chr13 97383308 97383388 -22900924 + PB1D10 SINE Alu 21 111 -6 6 1327 237 324 13 53 chr13 97383469 97383544 -22900768 + ID4_ SINE ID 9 80 -3 6 1327 840 276 23 42 chr13 97383647 97383908 -22900404 - B4A SINE B4 -1 291 36 6 1327 563 272 15 7 chr13 97384356 97384493 -22899819 + B1F SINE Alu 11 148 -1 6 1328 350 227 0 0 chr13 97388576 97388642 -22895670 + B4 SINE B4 141 206 -86 6 1328 29 0 0 0 chr13 97389522 97389551 -22894761 + AT_rich Low_complexity Low_complexity 1 29 0 6 1328 409 285 24 8 chr13 97389877 97390001 -22894311 + RSINE1 SINE B4 9 134 -31 6 1328 277 337 39 19 chr13 97390086 97390189 -22894123 - RSINE1 SINE B4 -42 123 19 6 1328 436 257 196 21 chr13 97390509 97390652 -22893660 + B4A SINE B4 123 290 -2 6 1328 330 205 0 0 chr13 97390810 97390893 -22893419 + (TATG)n Simple_repeat Simple_repeat 1 83 0 6 1328 294 295 28 9 chr13 97391023 97391129 -22893183 - L1M5 LINE L1 -473 5651 5544 6 1328 202 173 39 0 chr13 97391135 97391187 -22893125 + T-rich Low_complexity Low_complexity 3 56 0 6 1328 270 263 137 0 chr13 97391700 97391795 -22892517 + RSINE1 SINE B4 20 127 -38 6 1328 1035 67 94 22 chr13 97393286 97393424 -22890888 + B1_Mus1 SINE Alu 1 148 0 6 1328 24 32 0 0 chr13 97393424 97393455 -22890857 + AT_rich Low_complexity Low_complexity 1 31 0 6 1328 198 0 0 0 chr13 97394316 97394338 -22889974 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1328 568 178 76 8 chr13 97395060 97395179 -22889133 - B3 SINE B2 -86 130 4 6 1328 281 283 94 42 chr13 97395287 97395383 -22888929 - LTR79 LTR ERVL -372 155 55 6 1328 774 210 13 53 chr13 97396286 97396411 -22887901 + B1_Mur2 SINE Alu 5 131 -18 6 1328 3743 20 2 0 chr13 97396411 97396806 -22887506 - MTA_Mm LTR MaLR 0 396 1 7 1328 8564 54 51 1 chr13 97396806 97397852 -22886460 - MTA_Mm-int LTR MaLR 0 1098 1 7 1328 3663 25 5 0 chr13 97397852 97398246 -22886066 - MTA_Mm LTR MaLR 0 396 1 7 1328 774 210 13 53 chr13 97398246 97398269 -22886043 + B1_Mur2 SINE Alu 132 147 -2 6 1328 1492 48 42 0 chr13 97398358 97398547 -22885765 - L1_Mus2 LINE L1 0 6566 6370 7 1328 336 217 110 28 chr13 97398609 97398718 -22885594 - ID_B1 SINE B4 -5 219 102 7 1328 245 145 108 46 chr13 97399261 97399326 -22884986 - ID4 SINE ID -7 76 8 7 1328 2197 108 43 70 chr13 97399474 97399871 -22884441 - ORR1B1 LTR MaLR -8 386 1 7 1328 1552 65 16 0 chr13 97399990 97400174 -22884138 + B2_Mm2 SINE B2 1 187 -8 7 1328 248 0 0 30 chr13 97400907 97400940 -22883372 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 7 1328 577 271 54 0 chr13 97400940 97401069 -22883243 - B1_Mur3 SINE Alu -13 136 1 7 1328 1503 214 65 3 chr13 97401092 97401444 -22882868 + Lx5 LINE L1 6677 7050 0 7 1328 23 0 0 0 chr13 97401980 97402003 -22882309 + AT_rich Low_complexity Low_complexity 1 23 0 7 1328 562 319 50 0 chr13 97402062 97402203 -22882109 - RSINE1 SINE B4 -15 150 3 7 1328 230 202 330 22 chr13 97402909 97403000 -22881312 - PB1 SINE Alu -4 123 5 7 1328 275 180 0 0 chr13 97403041 97403091 -22881221 - ID_B1 SINE B4 0 224 175 7 1328 240 351 14 0 chr13 97403110 97403184 -22881128 - ID_B1 SINE B4 -118 106 32 7 1328 22 56 0 0 chr13 97403537 97403573 -22880739 + AT_rich Low_complexity Low_complexity 1 36 0 7 1328 353 210 136 8 chr13 97403680 97403805 -22880507 + L1MB4 LINE L1 6009 6149 -31 7 1328 806 211 102 0 chr13 97404559 97404725 -22879587 + B3 SINE B2 1 183 -33 7 1328 24 0 0 0 chr13 97407742 97407766 -22876546 + AT_rich Low_complexity Low_complexity 1 24 0 7 1328 558 0 0 0 chr13 97410696 97410758 -22873554 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 1328 255 31 0 0 chr13 97410758 97410789 -22873523 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1328 1862 254 196 44 chr13 97410792 97411118 -22873194 + Lx9 LINE L1 1848 2241 -3606 7 1328 219 36 0 0 chr13 97411118 97411146 -22873166 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1328 1240 35 14 0 chr13 97411148 97411292 -22873020 - B1_Mus2 SINE Alu 0 147 2 7 1328 1862 254 196 44 chr13 97411292 97411990 -22872322 + Lx9 LINE L1 2242 3031 -2816 7 1328 4801 241 108 58 chr13 97412187 97412448 -22871864 + Lx9 LINE L1 3671 3933 -1914 7 1328 1327 115 11 0 chr13 97412448 97412631 -22871681 + B2_Mm1t SINE B2 1 185 -8 7 1328 4801 241 108 58 chr13 97412631 97413882 -22870430 + Lx9 LINE L1 3934 5261 -586 7 1328 674 215 54 0 chr13 97413882 97414012 -22870300 - B1_Mur4 SINE Alu -13 137 1 7 1328 4801 248 102 55 chr13 97414012 97414664 -22869648 + Lx9 LINE L1 5262 5973 -1671 7 1328 2689 86 10 151 chr13 97414669 97415160 -22869152 - BGLII_Mus LTR ERVK 0 422 1 7 1328 446 231 131 28 chr13 97415345 97415524 -22868788 - B3 SINE B2 -13 180 1 7 1328 30 27 0 0 chr13 97415586 97415623 -22868689 + AT_rich Low_complexity Low_complexity 1 37 0 7 1328 23 33 0 0 chr13 97415679 97415709 -22868603 + AT_rich Low_complexity Low_complexity 1 30 0 7 1328 354 23 0 0 chr13 97415800 97415843 -22868469 + (CA)n Simple_repeat Simple_repeat 1 43 0 7 1328 26 30 0 0 chr13 97416107 97416140 -22868172 + AT_rich Low_complexity Low_complexity 1 33 0 7 1328 235 265 93 47 chr13 97416192 97416299 -22868013 + RLTR13D1 LTR ERVK 104 215 -591 7 1328 255 61 0 0 chr13 97416313 97416346 -22867966 + (T)n Simple_repeat Simple_repeat 1 33 0 7 1328 545 323 91 16 chr13 97416444 97416696 -22867616 - B4A SINE B4 -6 286 16 7 1328 192 40 0 0 chr13 97417278 97417303 -22867009 + (CCCA)n Simple_repeat Simple_repeat 1 25 0 7 1328 1682 150 32 14 chr13 97417306 97417590 -22866722 + Lx4A LINE L1 6766 7054 -4 7 1328 1761 193 73 47 chr13 97417670 97417779 -22866533 + MTD LTR MaLR 1 98 -321 7 1328 489 223 231 0 chr13 97417779 97417900 -22866412 - B1_Mur2 SINE Alu 0 149 1 7 1328 1761 193 73 47 chr13 97417900 97418003 -22866309 + MTD LTR MaLR 99 211 -208 7 1328 702 117 294 52 chr13 97418003 97418156 -22866156 + B2_Mm2 SINE B2 1 190 -5 7 1328 1761 193 73 47 chr13 97418156 97418350 -22865962 + MTD LTR MaLR 212 419 0 7 1328 24 0 0 0 chr13 97419785 97419809 -22864503 + AT_rich Low_complexity Low_complexity 1 24 0 7 1328 557 300 46 7 chr13 97420705 97420821 -22863491 - B4 SINE B4 -87 205 91 7 1328 237 33 0 0 chr13 97420821 97420851 -22863461 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 7 1328 557 300 46 7 chr13 97420851 97420885 -22863427 - B4 SINE B4 -202 90 50 7 1328 765 243 254 23 chr13 97421443 97421750 -22862562 + MTD LTR MaLR 1 378 -41 7 1328 377 208 137 8 chr13 97422420 97422551 -22861761 - B1F1 SINE Alu 0 149 2 7 1328 344 294 109 33 chr13 97422879 97423204 -22861108 - L1MB2 LINE L1 -101 6070 5656 7 1328 1733 97 100 4 chr13 97423266 97423525 -22860787 + L1_Mus3 LINE L1 6350 6633 -5 7 1328 504 252 31 16 chr13 97423795 97423924 -22860388 + B1F2 SINE Alu 7 137 -12 7 1328 366 80 0 0 chr13 97423925 97423975 -22860337 + (TC)n Simple_repeat Simple_repeat 2 51 0 7 1328 375 23 0 0 chr13 97423975 97424019 -22860293 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1328 934 237 15 0 chr13 97424287 97424485 -22859827 + B3 SINE B2 4 204 -12 7 1328 333 310 25 2 chr13 97424646 97424747 -22859565 + B1F2 SINE Alu 2 104 -16 7 1328 251 298 0 17 chr13 97425228 97425286 -22859026 - RSINE1 SINE B4 -105 60 4 7 1328 207 0 0 0 chr13 97425477 97425500 -22858812 + (CA)n Simple_repeat Simple_repeat 1 23 0 7 1328 290 288 12 36 chr13 97426095 97426178 -22858134 - ID4 SINE ID 0 83 3 7 1328 758 182 7 40 chr13 97426206 97426355 -22857957 + B1_Mus1 SINE Alu 2 145 -3 7 1328 270 0 0 0 chr13 97426355 97426385 -22857927 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 7 1328 735 289 27 16 chr13 97427203 97427385 -22856927 + B4A SINE B4 28 211 -81 7 1328 1225 70 177 18 chr13 97427385 97427688 -22856624 + MTB LTR MaLR 1 413 -8 7 1328 198 0 0 0 chr13 97427701 97427723 -22856589 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1328 724 203 31 0 chr13 97427731 97427859 -22856453 + B1_Mur1 SINE Alu 1 132 -17 7 1328 447 175 152 20 chr13 97429563 97429662 -22854650 + PB1D10 SINE Alu 5 116 -1 7 1328 441 0 0 0 chr13 97431703 97431752 -22852560 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1328 395 281 152 80 chr13 97431754 97432017 -22852295 - B4A SINE B4 -6 286 5 7 1328 630 174 9 44 chr13 97432253 97432367 -22851945 + B3A SINE B2 1 110 -88 7 1328 238 262 86 100 chr13 97432367 97432393 -22851919 + B4A SINE B4 1 138 -154 7 1328 2326 98 274 0 chr13 97433300 97433687 -22850625 + MT2_Mm LTR ERVL 1 493 0 7 1328 248 293 99 20 chr13 97433963 97434064 -22850248 + PB1D7 SINE Alu 5 113 -7 7 1328 417 220 11 0 chr13 97434202 97434293 -22850019 + ORR1E LTR MaLR 1 92 -267 7 1328 358 330 0 0 chr13 97434978 97435069 -22849243 - ID_B1 SINE B4 -1 223 133 7 1328 226 298 216 32 chr13 97435069 97435098 -22849214 - B1F1 SINE Alu 0 144 2 7 1328 388 111 556 0 chr13 97437884 97437974 -22846338 + PB1D9 SINE Alu 1 140 -8 7 1328 183 42 0 0 chr13 97437974 97437998 -22846314 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1328 232 250 0 84 chr13 97438038 97438121 -22846191 + G-rich Low_complexity Low_complexity 3 78 0 7 1328 23 0 0 0 chr13 97439018 97439041 -22845271 + AT_rich Low_complexity Low_complexity 1 23 0 7 1328 212 320 125 25 chr13 97441707 97441867 -22842445 + L2c LINE L2 3030 3205 -182 7 1328 360 0 0 0 chr13 97441968 97442008 -22842304 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1328 741 209 30 37 chr13 97442011 97442175 -22842137 - B3 SINE B2 -45 171 9 7 1328 372 286 32 1 chr13 97442724 97442822 -22841490 + B1F1 SINE Alu 1 98 -19 7 1328 247 301 82 0 chr13 97442959 97443032 -22841280 + ID4 SINE ID 4 82 -1 7 1328 213 65 0 0 chr13 97443032 97443063 -22841249 + (CA)n Simple_repeat Simple_repeat 2 32 0 7 1328 764 52 165 0 chr13 97443096 97443211 -22841101 - B1_Mus1 SINE Alu 0 148 15 7 1328 612 200 9 0 chr13 97443227 97443337 -22840975 - B1_Mm SINE Alu 0 147 37 7 1328 291 252 115 58 chr13 97443498 97443654 -22840658 + YREP_Mm Unknown Unknown 147 311 -1501 7 1328 747 178 47 0 chr13 97443529 97443658 -22840654 - ID_B1 SINE B4 -7 217 83 7 1328 254 308 25 25 chr13 97443562 97443682 -22840630 - MT2B LTR ERVL -342 259 140 7 1328 30 45 0 0 chr13 97443833 97443877 -22840435 + AT_rich Low_complexity Low_complexity 1 44 0 7 1328 1186 68 0 0 chr13 97444493 97444640 -22839672 + B1_Mm SINE Alu 1 147 0 7 1328 606 290 0 25 chr13 97444826 97444985 -22839327 + RSINE1 SINE B4 5 159 -6 7 1328 405 0 0 0 chr13 97445672 97445717 -22838595 + (GA)n Simple_repeat Simple_repeat 1 45 0 7 1328 186 103 0 0 chr13 97445856 97445885 -22838427 + (CAAAAA)n Simple_repeat Simple_repeat 6 34 0 7 1328 22 0 0 0 chr13 97446315 97446337 -22837975 + AT_rich Low_complexity Low_complexity 1 22 0 7 1328 200 59 29 0 chr13 97446852 97446886 -22837426 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1328 1330 265 110 24 chr13 97447007 97447545 -22836767 - RLTR19-int LTR ERVK -4125 2012 1429 7 1328 2441 126 30 8 chr13 97448068 97448468 -22835844 - MTC LTR MaLR -8 413 5 7 1328 407 19 0 19 chr13 97448715 97448768 -22835544 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 7 1328 413 217 11 32 chr13 97448908 97449003 -22835309 - RSINE1 SINE B4 -32 133 41 7 1328 286 116 0 0 chr13 97449102 97449145 -22835167 + B3 SINE B2 2 44 -172 7 1328 2209 119 66 0 chr13 97449152 97449514 -22834798 + ORR1B1 LTR MaLR 9 394 0 7 1328 382 223 286 0 chr13 97449523 97449635 -22834677 + B1_Mur4 SINE Alu 1 144 -6 7 1328 293 233 54 14 chr13 97450809 97450883 -22833429 - ID4_ SINE ID -4 79 3 7 1328 1104 89 0 7 chr13 97451213 97451360 -22832952 - B1_Mm SINE Alu 0 147 2 8 1328 685 320 59 41 chr13 97452262 97452823 -22831489 + MER21B LTR ERV1 132 739 -124 8 1328 645 195 7 48 chr13 97453323 97453479 -22830833 + B1_Mur1 SINE Alu 3 147 -2 8 1328 459 0 0 0 chr13 97453570 97453621 -22830691 + (TC)n Simple_repeat Simple_repeat 1 51 0 8 1328 288 0 0 0 chr13 97453621 97453653 -22830659 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1328 342 0 0 0 chr13 97453653 97453690 -22830622 + (GA)n Simple_repeat Simple_repeat 2 39 0 8 1328 371 319 0 8 chr13 97453711 97453828 -22830484 + B1_Mur1 SINE Alu 4 119 -30 8 1328 1699 54 0 0 chr13 97453821 97454044 -22830268 - MT2C_Mm LTR ERVL -252 223 1 8 1328 1806 141 19 52 chr13 97454143 97454510 -22829802 - RLTR31_Mm LTR ERVK 0 561 207 8 1328 627 14 0 0 chr13 97455331 97455403 -22828909 + (CAAG)n Simple_repeat Simple_repeat 3 74 0 8 1328 241 293 40 0 chr13 97455931 97456006 -22828306 - MER20 DNA MER1_type -141 78 1 8 1328 1507 152 110 3 chr13 97456101 97456391 -22827921 + RLTR14 LTR ERV1 62 382 0 8 1328 36 53 0 0 chr13 97456844 97456901 -22827411 + AT_rich Low_complexity Low_complexity 1 57 0 8 1328 242 333 64 0 chr13 97456984 97457062 -22827250 + ID4_ SINE ID 1 83 0 8 1328 496 273 66 94 chr13 97457103 97457390 -22826922 + HAL1b LINE L1 1001 1279 -730 8 1328 1499 38 55 0 chr13 97457627 97457810 -22826502 + B2_Mm1t SINE B2 1 193 0 8 1328 226 301 58 10 chr13 97457825 97457929 -22826383 + HAL1b LINE L1 1278 1386 -623 8 1328 27 29 0 0 chr13 97457951 97457985 -22826327 + AT_rich Low_complexity Low_complexity 1 34 0 8 1328 1036 168 44 10 chr13 97458062 97458266 -22826046 - B3 SINE B2 -5 211 1 8 1328 603 263 151 86 chr13 97458389 97458699 -22825613 + L1M4 LINE L1 4598 4950 -1196 8 1328 845 164 28 7 chr13 97458699 97458840 -22825472 + B1_Mur4 SINE Alu 1 144 -6 8 1328 603 262 161 89 chr13 97458840 97458990 -22825322 + L1M4 LINE L1 4951 5083 -1063 8 1328 234 256 24 35 chr13 97459017 97459102 -22825210 - L1M5 LINE L1 -726 5718 5635 8 1328 331 316 123 20 chr13 97459119 97459371 -22824941 - L1M5 LINE L1 -597 5582 5305 8 1328 350 269 0 31 chr13 97459450 97459546 -22824766 - B1F SINE Alu -5 144 52 8 1328 327 364 20 20 chr13 97459669 97459815 -22824497 - RSINE1 SINE B4 0 165 20 8 1328 225 0 0 0 chr13 97459948 97459973 -22824339 + (T)n Simple_repeat Simple_repeat 1 25 0 8 1328 2912 74 41 17 chr13 97460221 97460632 -22823680 - BGLII LTR ERVK 0 421 1 8 1328 3111 201 92 64 chr13 97460633 97461635 -22822677 - MYSERV16_I-int LTR ERVK 0 2326 1297 8 1328 741 159 48 54 chr13 97461625 97461791 -22822521 - RMER3D-int LTR ERVK -1146 1696 1532 8 1328 1944 168 127 16 chr13 97461824 97462257 -22822055 - RMER3D-int LTR ERVK -1310 1532 1052 8 1328 671 222 0 42 chr13 97462295 97462488 -22821824 - RMER3D-int LTR ERVK -2006 836 652 8 1328 4798 65 16 11 chr13 97462512 97463150 -22821162 + L1_Mus2 LINE L1 5926 6566 0 8 1328 466 125 0 0 chr13 97463162 97463234 -22821078 - RMER3D-int LTR ERVK -2268 574 503 8 1328 3030 71 37 0 chr13 97463647 97464053 -22820259 - BGLII LTR ERVK 0 421 1 8 1328 858 177 7 13 chr13 97464178 97464327 -22819985 + B1_Mus1 SINE Alu 1 148 0 8 1328 437 284 0 17 chr13 97464518 97464636 -22819676 - B1F SINE Alu -21 128 13 8 1328 249 33 0 0 chr13 97465281 97465311 -22819001 + (TCTG)n Simple_repeat Simple_repeat 2 31 0 8 1328 291 138 15 0 chr13 97466006 97466071 -22818241 + Lx3_Mus LINE L1 6942 7007 -2 8 1328 1156 51 0 0 chr13 97466081 97466218 -22818094 + B1_Mus2 SINE Alu 2 138 -9 8 1328 279 0 0 0 chr13 97466218 97466249 -22818063 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1328 431 88 0 29 chr13 97466447 97466493 -22817819 + (TTC)n Simple_repeat Simple_repeat 1 45 0 8 1328 1023 156 0 0 chr13 97466493 97466672 -22817640 + CT-rich Low_complexity Low_complexity 2 180 0 8 1328 431 88 0 29 chr13 97466672 97466695 -22817617 + (TTC)n Simple_repeat Simple_repeat 2 24 0 8 1328 1226 61 0 0 chr13 97466695 97466842 -22817470 - B1_Mus2 SINE Alu 0 147 1 8 1328 532 269 92 7 chr13 97466919 97467061 -22817251 + RSINE1 SINE B4 2 155 -10 8 1328 215 283 0 0 chr13 97467104 97467150 -22817162 + PB1D10 SINE Alu 4 49 -68 8 1328 360 286 51 40 chr13 97467149 97467324 -22816988 + MER2 DNA MER2_type 96 272 -73 8 1328 251 325 35 46 chr13 97467542 97467629 -22816683 + B3A SINE B2 83 168 -30 8 1328 687 95 0 0 chr13 97467676 97467781 -22816531 + (TG)n Simple_repeat Simple_repeat 2 106 0 8 1328 650 260 27 7 chr13 97467782 97467929 -22816383 - B3A SINE B2 -44 154 5 8 1328 232 213 0 0 chr13 97468599 97468642 -22815670 + B1F SINE Alu 15 57 -63 8 1328 306 0 0 0 chr13 97468658 97468692 -22815620 + (CA)n Simple_repeat Simple_repeat 2 35 0 8 1328 859 236 18 36 chr13 97468863 97469083 -22815229 + B3 SINE B2 1 216 0 8 1328 544 321 56 3 chr13 97469194 97469516 -22814796 + L1MEc LINE L1 130 468 -5932 8 1328 503 312 43 0 chr13 97469696 97469837 -22814475 + RSINE1 SINE B4 6 152 -13 8 1328 381 43 0 0 chr13 97469944 97469991 -22814321 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1328 546 16 0 0 chr13 97470139 97470202 -22814110 + (CA)n Simple_repeat Simple_repeat 1 63 0 8 1328 1501 49 0 0 chr13 97470297 97470481 -22813831 - L1Md_T LINE L1 0 6582 6399 8 1328 399 41 0 0 chr13 97470851 97470900 -22813412 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1328 185 291 153 60 chr13 97470975 97470996 -22813316 + L2c LINE L2 3262 3280 -146 8 1328 2113 115 88 23 chr13 97470996 97471380 -22812932 + RLTR9E LTR ERVK 1 409 0 8 1328 228 289 67 59 chr13 97471380 97471508 -22812804 + L2c LINE L2 3269 3425 -1 8 1328 27 0 0 0 chr13 97471624 97471651 -22812661 + AT_rich Low_complexity Low_complexity 1 27 0 8 1328 623 174 170 24 chr13 97471702 97471867 -22812445 + MTD LTR MaLR 1 189 -230 8 1328 1535 245 154 51 chr13 97471870 97472332 -22811980 + MTD-int LTR MaLR 625 1343 -237 8 1328 348 24 0 0 chr13 97472332 97472373 -22811939 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1328 1535 234 145 55 chr13 97472373 97472588 -22811724 + MTD-int LTR MaLR 1005 1253 -5 8 1328 1061 254 98 12 chr13 97472606 97472952 -22811360 + MTD LTR MaLR 18 393 -26 8 1328 471 264 24 16 chr13 97472967 97473090 -22811222 - B3A SINE B2 -74 124 1 8 1328 189 0 0 0 chr13 97473636 97473657 -22810655 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 8 1328 817 203 99 20 chr13 97473666 97473867 -22810445 - ID_B1 SINE B4 -7 217 1 8 1328 270 304 33 0 chr13 97473867 97473959 -22810353 + LTR84b LTR ERVL 656 750 -11 8 1328 255 250 0 0 chr13 97474132 97474184 -22810128 + L1MC LINE L1 5487 5538 -806 8 1328 1895 122 14 47 chr13 97474184 97474528 -22809784 - L1_Mus3 LINE L1 -6 6632 6300 8 1328 181 342 58 58 chr13 97474839 97475010 -22809302 + MIRb SINE MIR 72 242 -26 8 1328 445 266 0 43 chr13 97475365 97475740 -22808572 + GA-rich Low_complexity Low_complexity 1 358 0 8 1328 425 266 0 43 chr13 97475799 97475984 -22808328 + GA-rich Low_complexity Low_complexity 4 180 0 8 1328 2304 170 33 126 chr13 97476059 97476663 -22807649 + RLTR18 LTR ERVK 28 575 -41 8 1328 2550 48 113 11 chr13 97476664 97477018 -22807294 + RLTR10 LTR ERVK 1 390 0 8 1328 6111 23 4 0 chr13 97477018 97477702 -22806610 + RLTR10-int LTR ERVK 302 988 -999 8 1328 8999 15 2 0 chr13 97477780 97478773 -22805539 + RLTR10-int LTR ERVK 990 1984 -3 8 1328 2890 50 26 10 chr13 97478775 97479159 -22805153 + RLTR10 LTR ERVK 1 390 0 8 1328 375 119 0 0 chr13 97479215 97479282 -22805030 + (CA)n Simple_repeat Simple_repeat 2 68 0 8 1328 630 207 138 11 chr13 97479328 97479509 -22804803 - ID_B1 SINE B4 -2 222 19 8 1328 254 250 22 0 chr13 97479528 97479620 -22804692 + (TATATG)n Simple_repeat Simple_repeat 2 95 0 8 1328 2896 63 39 13 chr13 97479720 97480106 -22804206 - MTA_Mm LTR MaLR 0 396 1 8 1328 520 126 11 0 chr13 97480502 97480589 -22803723 - URR1B DNA MER1_type 0 225 138 8 1328 1339 75 0 11 chr13 97480582 97480772 -22803540 + ORR1A1 LTR MaLR 159 346 0 8 1328 10649 135 54 18 chr13 97480772 97482666 -22801646 + ORR1A1-int LTR MaLR 1 1963 0 8 1328 697 129 11 1 chr13 97482667 97482795 -22801517 + ORR1A1 LTR MaLR 2 131 -195 8 1328 222 174 0 0 chr13 97483218 97483264 -22801048 + (TATG)n Simple_repeat Simple_repeat 2 47 0 8 1328 311 60 20 0 chr13 97483340 97483390 -22800922 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 8 1328 3341 70 2 4 chr13 97483390 97483860 -22800452 - Lx3_Mus LINE L1 -1077 5932 5467 8 1328 277 78 20 0 chr13 97484063 97484114 -22800198 - URR1B DNA MER1_type -72 153 102 8 1328 635 117 0 0 chr13 97484115 97484209 -22800103 - BC1_Mm scRNA scRNA -58 94 1 8 1328 771 116 0 0 chr13 97484559 97484680 -22799632 + (TTCC)n Simple_repeat Simple_repeat 3 123 0 8 1328 938 307 58 82 chr13 97484839 97485142 -22799170 - MLT1E LTR MaLR 0 653 363 8 1328 2944 97 33 49 chr13 97485142 97485632 -22798680 - RLTR45 LTR ERVK 0 482 1 8 1328 938 307 58 82 chr13 97485632 97485843 -22798469 - MLT1E LTR MaLR -291 362 151 8 1328 531 257 161 21 chr13 97485990 97486133 -22798179 + RSINE1 SINE B4 3 165 0 8 1328 32 43 0 0 chr13 97486136 97486182 -22798130 + AT_rich Low_complexity Low_complexity 1 46 0 8 1328 536 274 109 16 chr13 97486385 97486578 -22797734 - ERVL-B4-int LTR ERVL -2260 3454 3244 8 1328 613 264 56 79 chr13 97486779 97486993 -22797319 - MTE2a LTR MaLR -108 271 63 8 1328 2111 188 50 2 chr13 97487052 97487452 -22796860 + MTD LTR MaLR 1 419 0 8 1328 403 291 136 0 chr13 97487877 97488076 -22796236 - ERVL-B4-int LTR ERVL -2998 2716 2491 8 1328 469 266 242 16 chr13 97488284 97488373 -22795939 - L1_Mur3 LINE L1 -1967 3913 3793 8 1328 3052 119 21 35 chr13 97488373 97488853 -22795459 - MT2C_Mm LTR ERVL -2 473 1 8 1328 469 243 153 38 chr13 97488853 97489039 -22795273 - L1_Mur3 LINE L1 -2331 3809 3600 8 1328 204 40 0 0 chr13 97489181 97489206 -22795106 + (CAAAT)n Simple_repeat Simple_repeat 2 26 0 8 1328 1973 247 20 80 chr13 97489338 97489954 -22794358 + RMER1B Other Other 1 506 -560 8 1328 315 0 0 0 chr13 97489954 97489989 -22794323 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1328 1274 271 57 31 chr13 97489989 97490267 -22794045 + RMER1A Other Other 1 450 -580 8 1328 445 161 0 0 chr13 97490275 97490360 -22793952 - L1_Rod LINE L1 -1790 4353 4235 8 1328 854 35 17 0 chr13 97490830 97490945 -22793367 + B1_Mm SINE Alu 30 146 -1 8 1328 301 249 49 32 chr13 97491224 97491393 -22792919 + RLTR13D3 LTR ERVK 985 1072 -42 8 1328 2376 201 62 30 chr13 97491394 97491963 -22792349 - L1_Rod LINE L1 -1609 4238 3652 8 1328 7227 161 50 27 chr13 97492007 97492228 -22792084 - L1_Rod LINE L1 -3155 2692 2480 8 1328 1146 82 7 0 chr13 97492228 97492375 -22791937 + B1_Mus1 SINE Alu 1 148 0 8 1328 7227 176 48 22 chr13 97492375 97494301 -22790011 - L1_Rod LINE L1 -3368 2479 496 8 1328 293 347 19 47 chr13 97494311 97494523 -22789789 - ERVL-E-int LTR ERVL -3850 1817 1612 8 1328 493 329 40 88 chr13 97495300 97495573 -22788739 - MLT1F2 LTR MaLR -128 432 173 8 1328 544 191 26 17 chr13 97495744 97495861 -22788451 + B1F SINE Alu 19 136 -13 8 1328 581 40 13 0 chr13 97495864 97495940 -22788372 + (CAAAA)n Simple_repeat Simple_repeat 3 79 0 9 1328 1219 41 0 0 chr13 97496271 97496417 -22787895 - B1_Mm SINE Alu 0 147 2 9 1328 189 0 0 0 chr13 97497121 97497142 -22787170 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 9 1328 375 206 55 0 chr13 97497180 97497253 -22787059 + ID4_ SINE ID 4 80 -3 9 1328 842 245 14 23 chr13 97497851 97498068 -22786244 - B3 SINE B2 0 216 2 9 1328 252 239 78 22 chr13 97498348 97498438 -22785874 + MIRb SINE MIR 54 148 -120 9 1328 216 0 0 0 chr13 97498724 97498748 -22785564 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 9 1328 297 313 56 62 chr13 97501030 97501190 -22783122 - MT2B2 LTR ERVL -259 325 167 1 1328 627 256 31 8 chr13 97501062 97501192 -22783120 - ID_B1 SINE B4 -10 214 82 2 1328 375 171 0 0 chr13 97502633 97502703 -22781609 - Lx2B LINE L1 -972 6025 5956 3 1328 581 196 0 20 chr13 97502703 97502849 -22781463 + T-rich Low_complexity Low_complexity 1 143 0 4 1328 1208 41 7 0 chr13 97502865 97503012 -22781300 - B1_Mus1 SINE Alu 0 148 1 5 1328 3477 119 4 5 chr13 97503012 97503672 -22780640 - Lx2B LINE L1 -1028 5972 5316 3 1328 5663 158 10 12 chr13 97503672 97504641 -22779671 + Lx2B LINE L1 6024 6990 -10 3 1328 231 89 54 0 chr13 97504902 97504958 -22779354 + (TTTTTG)n Simple_repeat Simple_repeat 1 59 0 6 1328 1111 64 7 0 chr13 97504958 97505099 -22779213 - B1_Mus1 SINE Alu -2 146 5 7 1328 541 263 50 9 chr13 97505657 97505876 -22778436 + L1MA9 LINE L1 5709 5936 -376 8 1328 328 36 0 67 chr13 97506048 97506108 -22778204 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 9 1328 207 100 0 0 chr13 97506196 97506226 -22778086 + (TATATG)n Simple_repeat Simple_repeat 4 33 0 1 1328 342 341 42 9 chr13 97507108 97507321 -22776991 - L1M5 LINE L1 -600 5640 5421 1 1328 596 254 169 6 chr13 97507350 97507528 -22776784 - B3 SINE B2 -9 207 1 1 1328 356 233 225 0 chr13 97507842 97507962 -22776350 - RSINE1 SINE B4 -17 148 2 1 1328 454 310 79 16 chr13 97508749 97508939 -22775373 - MER31A LTR ERV1 -5 480 279 1 1328 1606 98 4 16 chr13 97508948 97509197 -22775115 + Lx2 LINE L1 6752 6997 0 1 1328 1340 83 39 0 chr13 97509264 97509444 -22774868 + B2_Mm2 SINE B2 1 187 -8 1 1328 656 265 58 46 chr13 97509455 97509696 -22774616 - MER31A LTR ERV1 -239 246 3 1 1328 242 234 106 0 chr13 97509799 97509893 -22774419 - MER63D DNA AcHobo -856 205 102 1 1328 208 70 23 23 chr13 97510402 97510446 -22773866 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 1 1328 1454 57 17 0 chr13 97510893 97511070 -22773242 - B2_Mm2 SINE B2 -14 181 2 1 1328 425 189 0 0 chr13 97511080 97511154 -22773158 - B1_Mur4 SINE Alu -51 99 26 2 1328 1127 49 28 0 chr13 97511259 97511402 -22772910 - B1_Mus2 SINE Alu 0 147 1 2 1328 279 250 128 9 chr13 97511417 97511526 -22772786 + MLT1C LTR MaLR 53 174 -293 2 1328 2252 29 4 0 chr13 97511527 97511803 -22772509 + L1Md_F2 LINE L1 5310 5586 -297 2 1328 7827 52 4 9 chr13 97511803 97512801 -22771511 + L1Md_F2 LINE L1 5587 6579 -3 2 1328 24 0 0 0 chr13 97513244 97513268 -22771044 + AT_rich Low_complexity Low_complexity 1 24 0 2 1328 302 262 24 24 chr13 97513392 97513474 -22770838 - ID_B1 SINE B4 0 224 143 2 1328 798 68 0 25 chr13 97513459 97513580 -22770732 - BC1_Mm scRNA scRNA -34 118 1 2 1328 228 67 0 0 chr13 97513626 97513656 -22770656 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2 1328 658 196 127 42 chr13 97513661 97513826 -22770486 - B3A SINE B2 -15 183 5 2 1328 210 238 0 0 chr13 97514532 97514574 -22769738 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1328 876 101 0 141 chr13 97515065 97515250 -22769062 + L1_Mus2 LINE L1 6408 6566 0 3 1328 207 150 50 0 chr13 97515284 97515324 -22768988 + CT-rich Low_complexity Low_complexity 3 44 0 3 1328 339 150 0 0 chr13 97515516 97515576 -22768736 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 1328 460 193 11 0 chr13 97515588 97515676 -22768636 - B4A SINE B4 -42 250 162 3 1328 327 227 132 21 chr13 97515879 97516023 -22768289 - L1MC5 LINE L1 -833 7128 6969 3 1328 23 0 0 0 chr13 97516299 97516322 -22767990 + AT_rich Low_complexity Low_complexity 1 23 0 3 1328 426 20 0 0 chr13 97516932 97516983 -22767329 + (CA)n Simple_repeat Simple_repeat 1 51 0 3 1328 252 231 30 99 chr13 97517218 97517229 -22767083 + MT2B2 LTR ERVL 156 159 -425 3 1328 430 264 49 14 chr13 97517229 97517371 -22766941 + B1F SINE Alu 3 149 0 3 1328 249 236 97 0 chr13 97517375 97517447 -22766865 + ID4 SINE ID 4 82 -1 3 20 243 88 0 0 chr13 97517538 97517572 -22766740 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 4 1329 320 266 121 0 chr13 97517646 97517770 -22766542 + L1MC5 LINE L1 6970 7108 -853 4 1329 886 144 200 0 chr13 97518976 97519156 -22765156 + B3 SINE B2 1 216 0 4 1329 182 381 51 19 chr13 97519326 97519540 -22764772 - L2c LINE L2 -229 3158 2938 4 1329 325 173 53 0 chr13 97519552 97519627 -22764685 - B1_Mur4 SINE Alu 0 150 72 4 1329 304 302 54 54 chr13 97519760 97519907 -22764405 - MER5A1 DNA MER1_type -19 147 1 4 1329 279 0 0 0 chr13 97520082 97520113 -22764199 + (T)n Simple_repeat Simple_repeat 1 31 0 4 1329 1036 58 65 0 chr13 97520113 97520251 -22764061 - B1_Mm SINE Alu 0 147 1 4 1329 1259 57 85 6 chr13 97520297 97520474 -22763838 - B2_Mm2 SINE B2 -3 192 2 4 1329 32 81 0 0 chr13 97520926 97521000 -22763312 + AT_rich Low_complexity Low_complexity 1 74 0 4 1329 378 0 0 0 chr13 97521049 97521091 -22763221 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1329 413 267 50 0 chr13 97521112 97521213 -22763099 - B1F SINE Alu -31 118 13 5 1329 1294 182 98 9 chr13 97521413 97521676 -22762636 + MTD LTR MaLR 134 402 -17 5 1329 378 0 0 0 chr13 97522137 97522179 -22762133 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1329 575 267 0 14 chr13 97522183 97522331 -22761981 - RSINE1 SINE B4 -17 148 3 5 1329 186 71 0 0 chr13 97523110 97523138 -22761174 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1329 386 287 11 0 chr13 97523628 97523722 -22760590 - B1F SINE Alu -6 143 49 5 1329 194 0 39 0 chr13 97523725 97523751 -22760561 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 5 1329 1178 75 0 0 chr13 97523792 97523938 -22760374 - B1_Mm SINE Alu 0 147 2 5 1329 418 245 71 0 chr13 97524237 97524335 -22759977 - MTEb LTR MaLR -10 369 265 5 1329 290 259 0 0 chr13 97524335 97524389 -22759923 - B1F SINE Alu -95 54 1 5 1329 207 191 24 0 chr13 97524404 97524446 -22759866 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1329 1112 288 17 31 chr13 97524453 97524747 -22759565 - B4A SINE B4 -2 290 1 6 1329 387 194 108 59 chr13 97524958 97525144 -22759168 + RMER17C LTR ERVK 80 274 -136 6 1329 192 77 0 0 chr13 97525145 97525171 -22759141 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 6 1329 191 36 0 35 chr13 97525210 97525239 -22759073 + (TATG)n Simple_repeat Simple_repeat 2 29 0 6 1329 2167 245 45 40 chr13 97526448 97527272 -22757040 + L1_Rod LINE L1 3798 4625 -1222 6 1329 7384 75 6 11 chr13 97527370 97527855 -22756457 - L1VL2 LINE L1 -1586 2029 1551 6 1329 2396 133 55 19 chr13 97527855 97528277 -22756035 - RLTR9B LTR ERVK 0 437 1 6 1329 7384 83 15 7 chr13 97528277 97529564 -22754748 - L1VL2 LINE L1 -2065 1550 246 6 1329 2303 100 25 8 chr13 97529589 97529942 -22754370 - RLTR15 LTR ERVK 0 359 1 6 1329 418 283 79 79 chr13 97530101 97530354 -22753958 - ORR1E LTR MaLR -106 253 1 6 1329 183 80 0 0 chr13 97530535 97530560 -22753752 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 7 1329 616 214 36 0 chr13 97531440 97531552 -22752760 - B3A SINE B2 -82 116 1 7 1329 600 154 0 0 chr13 97531724 97531828 -22752484 + CT-rich Low_complexity Low_complexity 2 105 0 7 1329 2282 135 11 11 chr13 97531830 97532198 -22752114 - RLTR17 LTR ERVK -324 368 1 7 1329 4089 195 53 40 chr13 97532198 97533333 -22750979 - RMER3D-int LTR ERVK 0 2842 1693 7 1329 223 257 14 28 chr13 97533333 97533405 -22750907 + T-rich Low_complexity Low_complexity 2 72 0 7 1329 1248 145 52 22 chr13 97533526 97533758 -22750554 - Lx2B LINE L1 -1 6999 6761 7 1329 12715 148 48 50 chr13 97533758 97534690 -22749622 - L1_Mur1 LINE L1 -1734 4152 3276 7 1329 1591 16 0 26 chr13 97534690 97534882 -22749430 - B2_Mm1a SINE B2 -6 187 1 7 1329 12715 148 48 50 chr13 97534882 97536743 -22747569 - L1_Mur1 LINE L1 -2611 3275 1367 7 1329 1899 172 13 13 chr13 97536739 97537228 -22747084 - L1VL4 LINE L1 -5403 932 443 7 1329 233 188 0 0 chr13 97537398 97537446 -22746866 - L1VL4 LINE L1 -5767 568 521 7 1329 4018 211 53 77 chr13 97537744 97539384 -22744928 - RMER1A Other Other 0 1030 1 7 1329 1108 314 46 24 chr13 97539357 97540066 -22744246 - RMER1B Other Other -529 537 7 8 1329 324 0 0 0 chr13 97540441 97540477 -22743835 + (TG)n Simple_repeat Simple_repeat 1 36 0 8 1329 185 35 0 65 chr13 97540723 97540754 -22743558 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8 1329 604 334 105 19 chr13 97541913 97542236 -22742076 + ORR1E LTR MaLR 1 351 -8 8 1329 298 258 128 6 chr13 97542360 97542539 -22741773 + L1M4 LINE L1 5129 5329 -817 8 1329 245 289 139 8 chr13 97542543 97542665 -22741647 + B1F1 SINE Alu 3 140 -9 8 1329 1011 234 116 16 chr13 97542712 97543099 -22741213 + L1MB3 LINE L1 5758 6183 0 8 1329 767 201 100 131 chr13 97543107 97543428 -22740884 + Lx9 LINE L1 7288 7598 -46 8 1329 1281 20 0 0 chr13 97543923 97544070 -22740242 + B1_Mus2 SINE Alu 1 147 0 8 1329 234 0 0 0 chr13 97544641 97544667 -22739645 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 8 1329 1082 298 57 40 chr13 97544667 97545069 -22739243 + Charlie1a DNA MER1_type 3 411 -1044 9 1329 516 305 43 53 chr13 97545149 97545336 -22738976 + B3A SINE B2 13 197 -1 9 1329 322 297 33 0 chr13 97545332 97545423 -22738889 + Charlie1a DNA MER1_type 541 634 -821 9 1329 1195 236 178 17 chr13 97545425 97545966 -22738346 - Lx8 LINE L1 -2 7471 6845 9 1329 264 289 0 13 chr13 97546432 97546509 -22737803 + CT-rich Low_complexity Low_complexity 2 77 0 9 1329 222 37 0 0 chr13 97546680 97546707 -22737605 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 9 1329 5119 86 27 10 chr13 97546707 97547431 -22736881 - Lx3A LINE L1 -15 6966 6229 9 1329 222 37 0 0 chr13 97547527 97547554 -22736758 + (TTG)n Simple_repeat Simple_repeat 2 28 0 9 1329 4186 221 21 7 chr13 97548080 97548928 -22735384 - Lx5 LINE L1 -1 7049 6190 9 1329 1456 129 16 26 chr13 97548937 97549216 -22735096 - ORR1A4 LTR MaLR -8 386 93 9 1329 205 146 0 47 chr13 97549219 97549262 -22735050 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 9 1329 720 147 237 65 chr13 97550392 97550624 -22733688 + Lx4A LINE L1 6787 7058 0 1 1329 395 119 15 0 chr13 97550624 97550691 -22733621 + (TAAA)n Simple_repeat Simple_repeat 4 71 0 1 1329 1105 219 96 54 chr13 97551045 97551113 -22733199 - RLTR20A LTR ERVK 0 541 449 1 1329 1301 99 16 0 chr13 97551113 97551295 -22733017 - B2_Mm2 SINE B2 -10 185 1 1 1329 1105 226 99 55 chr13 97551295 97551683 -22732629 - RLTR20A LTR ERVK -108 452 51 1 1329 3343 18 37 0 chr13 97553051 97553433 -22730879 - MTA_Mm LTR MaLR 0 396 1 1 1329 2104 147 68 5 chr13 97553865 97554234 -22730078 - ORR1B1 LTR MaLR -2 392 1 1 1329 287 204 0 0 chr13 97555281 97555335 -22728977 - RLTR10-int LTR ERVK -1699 288 235 1 1329 420 247 59 20 chr13 97555342 97555495 -22728817 - RLTR10A LTR ERVK -113 298 140 1 1329 2328 103 58 43 chr13 97555972 97556369 -22727943 - RLTR9D LTR ERVK 0 403 1 1 1329 2540 92 19 21 chr13 97558581 97558958 -22725354 - RLTR9E LTR ERVK 0 409 34 1 1329 195 42 0 0 chr13 97558960 97558984 -22725328 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1329 483 18 0 0 chr13 97558984 97559040 -22725272 + (TA)n Simple_repeat Simple_repeat 2 57 0 1 1329 448 257 248 5 chr13 97559050 97559263 -22725049 - B4A SINE B4 -28 264 1 1 1329 823 230 45 20 chr13 97559614 97559814 -22724498 - B3 SINE B2 -10 206 2 1 1329 25 0 0 0 chr13 97559886 97559911 -22724401 + AT_rich Low_complexity Low_complexity 1 25 0 1 1329 252 0 0 0 chr13 97559986 97560014 -22724298 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1 1329 417 245 28 38 chr13 97560014 97560120 -22724192 - B3 SINE B2 -16 200 96 1 1329 325 330 5 95 chr13 97560911 97561122 -22723190 - RMER4A LTR ERVK -250 216 25 1 1329 359 300 50 0 chr13 97561284 97561404 -22722908 - ID_B1 SINE B4 -17 207 82 1 1329 925 157 0 7 chr13 97561850 97561991 -22722321 - B1_Mur4 SINE Alu -10 140 1 1 1329 3417 211 74 36 chr13 97561997 97562878 -22721434 - Lx9 LINE L1 -7 7637 6719 1 1329 6356 113 15 37 chr13 97562878 97563924 -22720388 - RLTR13D2 LTR ERVK 0 1023 1 1 1329 3417 211 74 36 chr13 97563924 97564011 -22720301 - Lx9 LINE L1 -926 6718 6632 1 1329 22 0 0 0 chr13 97564826 97564848 -22719464 + AT_rich Low_complexity Low_complexity 1 22 0 1 1329 25 0 0 0 chr13 97565612 97565637 -22718675 + AT_rich Low_complexity Low_complexity 1 25 0 1 1329 786 0 0 11 chr13 97566665 97566756 -22717556 - L1_Mur1 LINE L1 -746 5140 5051 1 1329 1009 93 6 0 chr13 97566752 97566913 -22717399 + L1_Mur1 LINE L1 5140 5301 -585 1 1329 374 206 53 36 chr13 97567078 97567198 -22717114 + PB1 SINE Alu 1 122 -5 1 1329 434 286 0 0 chr13 97568294 97568392 -22715920 - PB1D10 SINE Alu -19 98 1 1 1329 319 283 113 21 chr13 97569794 97569935 -22714377 + L1MC4 LINE L1 7714 7867 -175 1 1329 369 214 0 0 chr13 97569981 97570079 -22714233 + (TGGA)n Simple_repeat Simple_repeat 3 100 0 1 1329 333 262 0 0 chr13 97570161 97570222 -22714090 - ID4 SINE ID -18 65 5 1 1329 22 0 0 0 chr13 97570356 97570378 -22713934 + AT_rich Low_complexity Low_complexity 1 22 0 1 1329 925 309 49 31 chr13 97570593 97570667 -22713645 + B4A SINE B4 1 74 -218 1 1329 1872 175 33 63 chr13 97570667 97571063 -22713249 + ORR1C2 LTR MaLR 1 384 0 1 1329 925 309 49 31 chr13 97571063 97571275 -22713037 + B4A SINE B4 75 292 0 1 1329 293 331 89 15 chr13 97571356 97571491 -22712821 - B4A SINE B4 0 292 148 1 1329 537 301 279 0 chr13 97571607 97571833 -22712479 - B4A SINE B4 -2 290 2 1 1329 351 361 85 35 chr13 97571859 97572201 -22712111 - L1MEc LINE L1 -5968 432 74 1 1329 265 327 73 18 chr13 97572575 97572684 -22711628 - B1F SINE Alu -22 127 13 1 1329 216 206 0 81 chr13 97572886 97572960 -22711352 - L3 LINE CR1 -866 3623 3556 1 1329 1018 182 72 5 chr13 97573026 97573219 -22711093 + B3 SINE B2 7 212 -4 1 1329 24 0 0 0 chr13 97573224 97573248 -22711064 + AT_rich Low_complexity Low_complexity 1 24 0 1 1329 803 134 46 23 chr13 97573910 97574040 -22710272 - B1_Mus2 SINE Alu -1 146 14 1 1329 3640 112 174 101 chr13 97574885 97575729 -22708583 - RMER17A2 LTR ERVK 0 906 1 1 1329 217 394 82 48 chr13 97575830 97576038 -22708274 - B3 SINE B2 0 216 2 1 1329 342 0 0 0 chr13 97576553 97576591 -22707721 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1329 647 176 131 84 chr13 97576766 97576976 -22707336 + Lx3A LINE L1 6777 7006 -3 1 1329 2282 167 62 51 chr13 97577156 97577643 -22706669 - Lx2B LINE L1 0 7000 6509 1 1329 1447 226 129 23 chr13 97577643 97577704 -22706608 - RLTR20B3 LTR ERVK -33 544 474 1 1329 290 26 26 0 chr13 97577704 97577743 -22706569 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1329 1447 226 129 23 chr13 97577743 97578152 -22706160 - RLTR20B3 LTR ERVK -104 473 24 1 1329 9285 96 15 11 chr13 97578384 97580024 -22704288 - Lx3B LINE L1 -4 6969 5269 1 1329 674 253 0 7 chr13 97580031 97580186 -22704126 - RLTR20D LTR ERVK -100 468 315 1 1329 5627 138 45 49 chr13 97580193 97581267 -22703045 - MYSERV16_I-int LTR ERVK -118 2208 1138 1 1329 1085 75 0 7 chr13 97581267 97581414 -22702898 - B1_Mm SINE Alu 0 147 2 1 1329 5627 138 45 49 chr13 97581414 97581454 -22702858 - MYSERV16_I-int LTR ERVK -1189 1137 1099 1 1329 4314 158 75 41 chr13 97581455 97582357 -22701955 - MYSERV16_I-int LTR ERVK -1393 933 1 1 1329 305 255 30 30 chr13 97582901 97583002 -22701310 - RMER3D-int LTR ERVK -1733 1109 1009 1 1329 1086 244 114 67 chr13 97583176 97583563 -22700749 - RLTR20A LTR ERVK 0 541 137 1 1329 347 102 0 0 chr13 97583568 97583617 -22700695 + Lx4A LINE L1 5626 5674 -1384 1 1329 22 56 0 0 chr13 97583893 97583929 -22700383 + AT_rich Low_complexity Low_complexity 1 36 0 1 1329 34329 67 14 2 chr13 97584093 97590240 -22694072 - L1Md_F2 LINE L1 0 6582 358 1 1329 617 286 24 86 chr13 97590315 97590525 -22693787 + B3A SINE B2 2 198 0 1 1329 213 318 15 0 chr13 97590601 97590667 -22693645 + CT-rich Low_complexity Low_complexity 1 67 0 1 1329 524 346 63 0 chr13 97590672 97590877 -22693435 - ID_B1 SINE B4 -4 220 3 1 1329 457 298 134 65 chr13 97590985 97591186 -22693126 - B3 SINE B2 -1 215 1 1 1329 340 294 87 10 chr13 97591619 97591722 -22692590 - PB1 SINE Alu -4 123 13 1 1329 255 273 0 0 chr13 97592115 97592181 -22692131 + CT-rich Low_complexity Low_complexity 6 71 0 1 1329 370 267 97 20 chr13 97592522 97592717 -22691595 - L1ME1 LINE L1 -173 6006 5797 1 1329 618 315 236 11 chr13 97592815 97593246 -22691066 + MLT1F1 LTR MaLR 8 524 -24 1 1329 1975 117 15 68 chr13 97593480 97593819 -22690493 + ORR1A4 LTR MaLR 1 321 -8 1 1329 408 20 0 0 chr13 97595162 97595211 -22689101 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1329 843 164 14 14 chr13 97595279 97595421 -22688891 - B1_Mur2 SINE Alu -7 142 1 1 1329 325 301 55 27 chr13 97595537 97595812 -22688500 - L1MB7 LINE L1 -16 6168 5954 1 1329 203 119 0 67 chr13 97595826 97595871 -22688441 + T-rich Low_complexity Low_complexity 2 43 0 1 1329 708 201 13 59 chr13 97596441 97596594 -22687718 + B1_Mus2 SINE Alu 2 147 0 1 1329 249 57 0 0 chr13 97596595 97596630 -22687682 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1 1329 387 0 0 0 chr13 97596730 97596773 -22687539 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1329 22 0 0 0 chr13 97596885 97596907 -22687405 + AT_rich Low_complexity Low_complexity 1 22 0 1 1329 691 199 37 0 chr13 97596960 97597096 -22687216 - B1_Mur4 SINE Alu -9 141 1 1 1329 289 214 12 157 chr13 97597194 97597277 -22687035 - MLT1F2 LTR MaLR -424 136 66 1 1329 235 279 102 37 chr13 97597343 97597451 -22686861 + L2a LINE L2 3226 3340 -86 1 1329 475 345 47 13 chr13 97597628 97597778 -22686534 - RSINE1 SINE B4 0 165 11 1 1329 23 0 0 0 chr13 97597792 97597815 -22686497 + AT_rich Low_complexity Low_complexity 1 23 0 1 1329 271 284 27 0 chr13 97598322 97598396 -22685916 + CT-rich Low_complexity Low_complexity 2 77 0 1 1329 21 36 0 0 chr13 97598442 97598470 -22685842 + AT_rich Low_complexity Low_complexity 1 28 0 1 1329 552 162 20 0 chr13 97598864 97598963 -22685349 - Lx3C LINE L1 -5 6971 6871 1 1329 22 0 0 0 chr13 97598979 97599001 -22685311 + AT_rich Low_complexity Low_complexity 1 22 0 1 1329 1152 82 0 0 chr13 97599025 97599172 -22685140 + B1_Mus1 SINE Alu 2 148 0 1 1329 24 0 0 0 chr13 97599264 97599288 -22685024 + AT_rich Low_complexity Low_complexity 1 24 0 1 1329 362 330 0 0 chr13 97599312 97599400 -22684912 - PB1 SINE Alu -24 103 16 1 1329 279 54 0 0 chr13 97600226 97600263 -22684049 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1329 286 296 61 53 chr13 97600270 97600384 -22683928 - RSINE1 SINE B4 -17 148 34 1 1329 1026 51 7 0 chr13 97601071 97601209 -22683103 - L1_Mus2 LINE L1 -1 6565 6427 1 1329 949 68 83 8 chr13 97603153 97603286 -22681026 - B1_Mus1 SINE Alu -5 143 1 1 1329 397 341 27 82 chr13 97604328 97604548 -22679764 + MLT1D LTR MaLR 5 212 -293 1 1329 1371 90 16 0 chr13 97604556 97604744 -22679568 + B2_Mm2 SINE B2 2 192 -3 1 1329 278 200 73 0 chr13 97604746 97604801 -22679511 + B3A SINE B2 4 62 -136 1 1329 318 88 12 70 chr13 97604806 97604892 -22679420 + GA-rich Low_complexity Low_complexity 6 86 0 1 1329 271 319 102 83 chr13 97604892 97605097 -22679215 + MLT1D LTR MaLR 180 388 -117 1 1329 2908 147 10 60 chr13 97605335 97605754 -22678558 + L1VL4 LINE L1 675 1083 -5574 1 1329 914 114 45 0 chr13 97605754 97605886 -22678426 - B1_Mus2 SINE Alu -9 138 1 1 1329 30130 116 9 8 chr13 97605886 97610685 -22673627 + L1VL4 LINE L1 1084 5882 -1 1 1329 27853 71 5 2 chr13 97610694 97615515 -22668797 - L1Md_F LINE L1 -696 5187 355 1 1329 259 232 18 0 chr13 97615783 97615839 -22668473 + B1_Mur1 SINE Alu 70 126 -23 1 1329 2007 225 71 73 chr13 97615927 97616503 -22667809 + RCHARR1 DNA MER1_type 109 683 -291 1 1329 204 159 44 22 chr13 97616588 97616633 -22667679 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1 1329 1099 285 56 4 chr13 97616635 97616903 -22667409 - MTE2b LTR MaLR -97 282 1 1 1329 1051 235 70 3 chr13 97616903 97617176 -22667136 + RCHARR1 DNA MER1_type 683 974 0 1 1329 2092 266 107 21 chr13 97617407 97617706 -22666606 - Lx9 LINE L1 -50 7594 7268 2 1329 3013 69 38 8 chr13 97617706 97618101 -22666211 - MTB_Mm LTR MaLR 0 407 1 2 1329 2092 266 107 21 chr13 97618101 97618625 -22665687 - Lx9 LINE L1 -377 7267 6700 2 1329 692 325 40 28 chr13 97618913 97619163 -22665149 + B4A SINE B4 13 265 -27 2 1329 279 0 0 0 chr13 97619220 97619251 -22665061 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1329 413 226 20 51 chr13 97619393 97619491 -22664821 - MER5A DNA MER1_type 0 189 95 2 1329 699 285 85 79 chr13 97619495 97619823 -22664489 - MLT1E1 LTR MaLR 0 654 325 2 1329 490 15 0 0 chr13 97620641 97620706 -22663606 + L1Md_A LINE L1 6518 6582 0 2 1329 391 214 80 45 chr13 97620833 97620921 -22663391 - PB1D10 SINE Alu -14 103 13 2 1329 21 0 0 0 chr13 97621153 97621174 -22663138 + AT_rich Low_complexity Low_complexity 1 21 0 2 1329 336 284 0 12 chr13 97621378 97621460 -22662852 + MTE2a LTR MaLR 236 316 -63 2 1329 290 303 73 0 chr13 97622993 97623102 -22661210 - PB1D10 SINE Alu 0 117 1 2 1329 180 0 0 0 chr13 97623320 97623340 -22660972 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1329 753 163 168 6 chr13 97623340 97623513 -22660799 - B3 SINE B2 -15 201 1 2 1329 544 261 135 103 chr13 97623628 97623910 -22660402 + B4 SINE B4 2 292 0 2 1329 1385 81 27 0 chr13 97624442 97624628 -22659684 - B2_Mm1a SINE B2 0 193 3 2 1329 1079 81 0 39 chr13 97624644 97624798 -22659514 - B1_Mus1 SINE Alu 0 148 1 2 1329 452 348 18 35 chr13 97625081 97625251 -22659061 - B4A SINE B4 0 292 126 2 1329 741 175 17 0 chr13 97625266 97625386 -22658926 - B3 SINE B2 -6 210 89 2 1329 577 189 262 6 chr13 97625562 97625722 -22658590 + B3 SINE B2 14 214 -2 2 1329 4828 67 3 22 chr13 97625772 97626415 -22657897 + L1_Mus2 LINE L1 5935 6565 -1 2 1329 21 0 0 0 chr13 97626928 97626949 -22657363 + AT_rich Low_complexity Low_complexity 1 21 0 2 1329 507 17 0 0 chr13 97627047 97627107 -22657205 + (TG)n Simple_repeat Simple_repeat 2 61 0 2 1329 24 53 0 0 chr13 97627342 97627380 -22656932 + AT_rich Low_complexity Low_complexity 1 38 0 2 1329 234 282 119 8 chr13 97627381 97627499 -22656813 + L1MC LINE L1 3756 3886 -2260 2 1329 361 363 55 6 chr13 97627511 97627694 -22656618 + L1M5 LINE L1 4504 4695 -1451 2 1329 246 250 28 0 chr13 97627934 97628006 -22656306 + L1MD LINE L1 4791 4864 -1282 2 1329 232 311 67 22 chr13 97628068 97628203 -22656109 + L1M5 LINE L1 4959 5099 -1047 2 1329 666 286 31 38 chr13 97628805 97628965 -22655347 - RSINE1 SINE B4 -4 161 3 2 1329 278 250 27 14 chr13 97629031 97629104 -22655208 + MIR3 SINE MIR 125 198 -10 2 1329 301 217 29 0 chr13 97629371 97629440 -22654872 - MER3 DNA MER1_type 0 209 139 2 1329 36949 4 0 0 chr13 97629448 97634979 -22649333 + L1Md_A LINE L1 56 5586 -297 2 1329 9018 4 0 0 chr13 97634979 97635975 -22648337 + L1Md_A LINE L1 5587 6582 0 2 1329 856 223 48 14 chr13 97636625 97636834 -22647478 + B3 SINE B2 1 216 0 2 1329 1300 102 32 0 chr13 97636997 97637183 -22647129 + B2_Mm1t SINE B2 2 193 0 2 1329 406 350 90 0 chr13 97637403 97637629 -22646683 - MER47B DNA MER2_type -147 271 25 2 1329 260 297 12 75 chr13 97638064 97638144 -22646168 - ID4 SINE ID -6 77 3 2 1329 184 284 193 67 chr13 97638960 97639183 -22645129 + MIR SINE MIR 3 253 -9 2 1329 2409 146 3 18 chr13 97639812 97640196 -22644116 - RLTR17 LTR ERVK 0 692 315 2 1329 1880 120 43 13 chr13 97640727 97641030 -22643282 - RLTR17 LTR ERVK -380 312 1 2 1329 497 268 33 72 chr13 97641430 97641583 -22642729 + RSINE1 SINE B4 12 158 -7 2 1329 342 313 44 16 chr13 97643349 97643471 -22640841 + B4A SINE B4 158 277 -15 2 1329 304 327 58 0 chr13 97644025 97644129 -22640183 + ORR1E LTR MaLR 1 110 -249 2 1329 388 254 24 33 chr13 97644595 97644723 -22639589 - L1_Rod LINE L1 -711 5413 5232 2 1329 557 157 213 0 chr13 97644723 97644831 -22639481 - B1_Mus2 SINE Alu -16 131 1 2 1329 388 279 48 66 chr13 97644831 97645023 -22639289 - L1_Rod LINE L1 -842 5301 5081 2 1329 7582 177 66 22 chr13 97645123 97646977 -22637335 - Lx7 LINE L1 -1741 5955 4020 2 1329 298 270 174 35 chr13 97646977 97647092 -22637220 + Charlie1b DNA MER1_type 27 157 -366 2 1329 430 254 76 8 chr13 97647100 97647231 -22637081 + Charlie1b DNA MER1_type 384 523 0 2 1329 871 241 25 0 chr13 97647696 97647899 -22636413 + B3 SINE B2 1 208 -8 2 1330 318 268 57 0 chr13 97649933 97650056 -22634256 - L1MA10 LINE L1 -14 6320 6191 2 1330 421 35 313 9 chr13 97650152 97650267 -22634045 + RMER17B LTR ERVK 311 460 -498 2 1330 727 185 8 15 chr13 97650423 97650555 -22633757 - MTD LTR MaLR 0 419 289 2 1330 777 259 48 100 chr13 97650555 97650874 -22633438 - L1MEc LINE L1 -428 5924 5618 2 1330 450 0 0 0 chr13 97650874 97650924 -22633388 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1330 777 259 48 100 chr13 97650924 97651025 -22633287 - L1MEc LINE L1 -735 5617 5526 2 1330 1119 76 0 0 chr13 97651027 97651171 -22633141 - B1_Mus1 SINE Alu -2 146 3 2 1330 11591 84 45 20 chr13 97651270 97654174 -22630138 - Lx3A LINE L1 -7 6974 4022 2 1330 1332 215 65 9 chr13 97654198 97654536 -22629776 - Lx9 LINE L1 -752 6892 6536 2 1330 273 247 281 62 chr13 97654596 97654756 -22629556 - RLTR9A LTR ERVK -173 195 1 2 1330 624 185 58 8 chr13 97654763 97654883 -22629429 - Lx9 LINE L1 -1092 6552 6427 2 1330 432 0 0 0 chr13 97654890 97654938 -22629374 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1330 2987 29 3 0 chr13 97654989 97655334 -22628978 - ORR1A1 LTR MaLR 0 346 1 2 1330 1495 187 46 33 chr13 97655404 97655850 -22628462 - Lx9 LINE L1 -1670 5974 5488 2 1330 351 198 306 55 chr13 97655854 97655949 -22628363 + Lx9 LINE L1 7350 7482 -162 2 1330 1973 213 61 108 chr13 97655949 97656506 -22627806 - MT2A LTR ERVL 0 533 3 2 1330 351 198 306 55 chr13 97656506 97656645 -22627667 + Lx9 LINE L1 7483 7642 -2 2 1330 214 218 50 56 chr13 97656914 97657094 -22627218 + (TTTAA)n Simple_repeat Simple_repeat 2 180 0 2 1330 580 236 57 0 chr13 97657181 97657304 -22627008 - B1F SINE Alu -7 142 13 2 1330 323 269 72 156 chr13 97657304 97657348 -22626964 - B4A SINE B4 -72 220 68 2 1330 183 42 0 0 chr13 97657348 97657372 -22626940 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1330 1087 60 0 7 chr13 97657373 97657508 -22626804 - B1_Mus2 SINE Alu -12 135 2 2 1330 400 264 82 65 chr13 97657510 97657852 -22626460 - L1MEc LINE L1 -1193 5126 4785 2 1330 664 272 132 11 chr13 97658064 97658585 -22625727 - L1MEc LINE L1 -1700 4619 4036 2 1330 2386 181 58 26 chr13 97658611 97658874 -22625438 - RMER5 LTR ERV1 -14 520 263 2 1330 180 0 0 0 chr13 97658874 97658894 -22625418 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 1330 1164 44 0 0 chr13 97658894 97659031 -22625281 - B1_Mm SINE Alu -9 138 2 2 1330 2386 181 58 26 chr13 97659031 97659270 -22625042 - RMER5 LTR ERV1 -272 262 2 2 1330 1217 230 166 29 chr13 97659270 97659968 -22624344 - L1MEc LINE L1 -2280 4039 3246 2 1330 2356 155 89 7 chr13 97659941 97660402 -22623910 - Lx LINE L1 0 6654 6156 2 1330 356 293 28 75 chr13 97660565 97660672 -22623640 + PB1D10 SINE Alu 33 134 -15 2 1330 357 24 0 0 chr13 97660749 97660791 -22623521 + (TG)n Simple_repeat Simple_repeat 1 42 0 2 1330 770 243 78 37 chr13 97660802 97661020 -22623292 - B4A SINE B4 0 292 66 2 1330 758 215 0 5 chr13 97661041 97661247 -22623065 - L1MEc LINE L1 -3209 3110 2906 2 1330 423 149 0 0 chr13 97661306 97661380 -22622932 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 2 1330 387 234 39 0 chr13 97661381 97661458 -22622854 - ID4_ SINE ID -1 82 3 2 1330 419 243 9 64 chr13 97661458 97661568 -22622744 - PB1D10 SINE Alu 0 117 14 2 1330 230 250 12 111 chr13 97661502 97661583 -22622729 - MT2B LTR ERVL -363 238 166 2 1330 696 275 125 28 chr13 97661606 97662091 -22622221 - L1MEc LINE L1 -3515 2801 2287 2 1330 470 301 79 57 chr13 97662095 97662515 -22621797 - L1MEc LINE L1 -5575 825 397 2 1330 342 293 87 138 chr13 97662555 97662769 -22621543 - L1MEc LINE L1 -6090 310 93 2 1330 192 77 0 0 chr13 97662769 97662795 -22621517 + (TCTG)n Simple_repeat Simple_repeat 1 26 0 2 1330 342 293 87 138 chr13 97662795 97662869 -22621443 - L1MEc LINE L1 -6308 92 37 2 1330 1962 168 74 26 chr13 97663623 97664013 -22620299 + MTC LTR MaLR 5 413 -8 2 1330 1034 164 124 0 chr13 97664174 97664375 -22619937 + URR1A DNA MER1_type 1 226 0 2 1330 545 261 15 7 chr13 97665564 97665699 -22618613 + B1_Mur2 SINE Alu 3 138 -11 2 1330 198 0 0 0 chr13 97665700 97665722 -22618590 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 2 1330 28 0 0 0 chr13 97665727 97665755 -22618557 + AT_rich Low_complexity Low_complexity 1 28 0 2 1330 416 293 24 31 chr13 97665869 97665996 -22618316 - RSINE1 SINE B4 -38 127 2 2 1330 3453 43 20 31 chr13 97666108 97666563 -22617749 - L1Md_F2 LINE L1 -3 6579 6130 2 1330 659 178 27 82 chr13 97666563 97666643 -22617669 + MTC LTR MaLR 36 114 -307 2 1330 594 128 60 8 chr13 97666643 97666777 -22617535 - L1Md_F2 LINE L1 0 6582 6442 2 1330 659 178 27 82 chr13 97666777 97666843 -22617469 + MTC LTR MaLR 115 174 -247 2 1330 303 317 75 15 chr13 97666939 97667099 -22617213 - MIRc SINE MIR -79 189 19 2 1330 316 302 11 11 chr13 97667231 97667318 -22616994 + 5S rRNA rRNA 2 88 -33 2 1330 213 316 0 0 chr13 97667568 97667625 -22616687 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 2 1330 636 57 9 28 chr13 97668068 97668176 -22616136 + (TTGG)n Simple_repeat Simple_repeat 2 107 0 2 1330 358 288 0 0 chr13 97668428 97668508 -22615804 + PB1D10 SINE Alu 3 82 -35 2 1330 830 193 9 52 chr13 97669133 97669346 -22614966 + RMER16 LTR ERVK 325 528 -5 2 1330 710 41 10 20 chr13 97669351 97669451 -22614861 + MusHAL1 LINE L1 2333 2431 -281 2 1330 8541 135 27 10 chr13 97669456 97669545 -22614767 + L1_Mur2 LINE L1 3849 3964 -1913 2 1330 323 23 23 0 chr13 97669545 97669589 -22614723 + (TA)n Simple_repeat Simple_repeat 1 45 0 2 1330 8541 135 27 10 chr13 97669589 97670919 -22613393 + L1_Mur2 LINE L1 3965 5292 -585 2 1330 2198 77 26 3 chr13 97670922 97671233 -22613079 - L1_Mur1 LINE L1 -1155 4731 4414 2 1330 614 263 156 28 chr13 97671233 97671522 -22612790 + L1_Rod LINE L1 5521 5846 -1 2 1330 467 213 144 75 chr13 97671922 97672110 -22612202 + B3 SINE B2 3 203 -13 2 1330 29 47 0 0 chr13 97672385 97672428 -22611884 + AT_rich Low_complexity Low_complexity 1 43 0 2 1330 285 235 31 94 chr13 97672464 97672591 -22611721 - B1F SINE Alu -3 146 28 2 1330 196 354 0 68 chr13 97673171 97673259 -22611053 - L2c LINE L2 -39 3348 3267 2 1330 418 333 53 29 chr13 97673711 97673918 -22610394 - MER58A DNA MER1_type -1 223 12 2 1330 1046 292 98 17 chr13 97674169 97674791 -22609521 - L1MB7 LINE L1 -12 6162 5482 2 1330 281 89 22 0 chr13 97675301 97675346 -22608966 + (TTTC)n Simple_repeat Simple_repeat 2 47 0 3 1330 1147 63 28 0 chr13 97675346 97675489 -22608823 - B1_Mus2 SINE Alu 0 147 1 3 1330 2568 126 34 69 chr13 97675555 97675991 -22608321 + MTC LTR MaLR 1 421 0 3 1330 1602 136 4 25 chr13 97676045 97676324 -22607988 - Lx2 LINE L1 -1 6996 6724 3 1330 1240 232 79 49 chr13 97676443 97676850 -22607462 - MTD LTR MaLR 0 419 1 3 1330 1342 110 10 10 chr13 97677913 97678106 -22606206 + B2_Mm1t SINE B2 1 193 0 3 1330 1198 108 42 21 chr13 97678109 97678298 -22606014 + B2_Mm2 SINE B2 2 194 -1 3 1330 4152 73 11 16 chr13 97678642 97679213 -22605099 + L1_Mus3 LINE L1 6001 6568 -70 3 1330 645 250 26 26 chr13 97680250 97680406 -22603906 + B3 SINE B2 58 213 -3 3 1330 451 311 117 16 chr13 97680897 97681246 -22603066 - L1MA4A LINE L1 -128 6028 5638 3 1330 1852 204 19 3 chr13 97681430 97681804 -22602508 + RLTR14 LTR ERV1 1 380 -2 3 1330 684 268 93 61 chr13 97681902 97682279 -22602033 + MLT1B LTR MaLR 2 390 0 3 1330 892 151 121 6 chr13 97682543 97682716 -22601596 + ORR1B1 LTR MaLR 2 194 -200 3 1330 336 240 84 126 chr13 97683353 97683520 -22600792 + RSINE1 SINE B4 6 165 0 3 1330 212 291 19 37 chr13 97683537 97683644 -22600668 + (CA)n Simple_repeat Simple_repeat 2 106 0 3 1330 261 311 6 53 chr13 97683668 97683838 -22600474 + (CA)n Simple_repeat Simple_repeat 1 162 0 3 1330 308 288 0 59 chr13 97683998 97684168 -22600144 + (CA)n Simple_repeat Simple_repeat 1 160 0 3 1330 343 289 0 58 chr13 97684234 97684425 -22599887 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1330 4011 191 60 115 chr13 97684445 97685569 -22598743 - RMER1B Other Other -3 1063 2 3 1330 220 167 0 45 chr13 97685832 97685876 -22598436 + GA-rich Low_complexity Low_complexity 5 46 0 3 1330 418 311 78 30 chr13 97685905 97686137 -22598175 - MIR SINE MIR 0 262 20 3 1330 373 206 15 0 chr13 97687859 97687927 -22596385 - ID4_ SINE ID -13 70 2 3 1330 576 247 72 0 chr13 97688279 97688445 -22595867 + Lx6 LINE L1 7283 7460 0 3 1330 587 238 37 102 chr13 97688819 97689135 -22595177 + RMER17C LTR ERVK 1 386 -24 3 1330 398 271 16 16 chr13 97689473 97689597 -22594715 + MLT1C LTR MaLR 71 194 -273 3 1330 1215 61 0 0 chr13 97689613 97689760 -22594552 + B1_Mm SINE Alu 1 147 0 3 1330 321 155 0 0 chr13 97689760 97689818 -22594494 + A-rich Low_complexity Low_complexity 1 58 0 3 1330 242 136 164 33 chr13 97690210 97690271 -22594041 + MTA_Mm LTR MaLR 6 74 -322 3 1330 1091 150 56 0 chr13 97690902 97691082 -22593230 + B2_Mm2 SINE B2 3 192 -3 3 1330 320 281 0 0 chr13 97691802 97691891 -22592421 + PB1D10 SINE Alu 27 115 -2 3 1330 6464 83 29 34 chr13 97692022 97693911 -22590401 - L1VL2 LINE L1 -1789 1909 92 3 1330 249 260 0 88 chr13 97696614 97696694 -22587618 + AluF_3 SINE Alu 137 209 -102 3 1330 321 229 109 45 chr13 97696871 97696981 -22587331 + PB1D10 SINE Alu 1 117 0 3 1330 857 138 14 7 chr13 97697592 97697738 -22586574 + B1_Mm SINE Alu 1 147 0 3 1330 252 305 0 0 chr13 97697959 97698018 -22586294 + ID_B1 SINE B4 146 204 -20 3 1330 233 274 83 33 chr13 97698113 97698234 -22586078 + MER5A DNA MER1_type 1 127 -62 3 1330 229 278 152 0 chr13 97699231 97699382 -22584930 - MER34 LTR ERV1 -115 427 254 3 1330 911 239 39 0 chr13 97699454 97699659 -22584653 - B3 SINE B2 -3 213 1 3 1330 216 0 0 0 chr13 97700354 97700378 -22583934 + (CCTTG)n Simple_repeat Simple_repeat 5 28 0 3 1330 222 37 0 0 chr13 97701056 97701083 -22583229 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1330 2266 101 0 44 chr13 97701089 97701431 -22582881 - ORR1A4 LTR MaLR 0 329 3 3 1330 180 0 0 0 chr13 97701920 97701940 -22582372 + (GA)n Simple_repeat Simple_repeat 1 20 0 3 1330 348 328 8 0 chr13 97704026 97704191 -22580121 + (TG)n Simple_repeat Simple_repeat 1 166 0 3 1330 513 237 0 0 chr13 97704313 97704410 -22579902 + PB1D10 SINE Alu 3 99 -18 3 1330 297 303 11 0 chr13 97704413 97704598 -22579714 + (CA)n Simple_repeat Simple_repeat 1 187 0 3 1330 613 301 41 82 chr13 97704867 97705160 -22579152 + B4A SINE B4 12 292 0 3 1330 1416 143 259 42 chr13 97708192 97708571 -22575741 - RMER6B LTR ERVK 0 461 1 3 1330 851 282 77 6 chr13 97708737 97709076 -22575236 + MLT1A0 LTR MaLR 3 365 0 3 1330 222 105 0 0 chr13 97710006 97710044 -22574268 + (T)n Simple_repeat Simple_repeat 1 38 0 3 1330 1179 62 0 0 chr13 97711147 97711293 -22573019 + B1_Mus2 SINE Alu 2 147 0 3 1330 1880 113 9 65 chr13 97711310 97711651 -22572661 - RLTRETN_Mm LTR ERVK 0 322 1 3 1330 707 254 0 53 chr13 97711921 97712108 -22572204 + B3A SINE B2 6 182 -16 3 1330 258 318 68 0 chr13 97712242 97712330 -22571982 - RCHARR1 DNA MER1_type -878 96 3 3 1330 23 0 0 0 chr13 97712509 97712532 -22571780 + AT_rich Low_complexity Low_complexity 1 23 0 3 1330 779 226 124 0 chr13 97712534 97712720 -22571592 - B3 SINE B2 -5 211 3 3 1330 492 329 61 37 chr13 97715656 97715902 -22568410 + MER2B DNA MER2_type 85 336 0 3 1330 260 267 11 43 chr13 97718680 97718774 -22565538 - RMER12 LTR ERVK -485 837 747 3 1330 800 227 7 13 chr13 97719162 97719362 -22564950 + B3A SINE B2 6 203 -13 3 1330 1053 207 24 19 chr13 97720382 97720589 -22563723 + B3 SINE B2 2 209 -7 3 1330 315 293 25 41 chr13 97721551 97721672 -22562640 + PB1D7 SINE Alu 1 119 -1 3 1330 441 0 0 0 chr13 97722057 97722106 -22562206 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1330 236 286 109 85 chr13 97722258 97722506 -22561806 - L1M5 LINE L1 -297 5827 5574 3 1330 1175 151 88 0 chr13 97722954 97723159 -22561153 - URR1B DNA MER1_type -2 223 1 3 1330 368 221 173 0 chr13 97723323 97723427 -22560885 + ID_B1 SINE B4 102 223 -1 3 1330 369 0 0 0 chr13 97723680 97723721 -22560591 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1330 210 71 0 0 chr13 97723721 97723748 -22560564 + (CG)n Simple_repeat Simple_repeat 2 29 0 3 1330 249 282 42 0 chr13 97723817 97723888 -22560424 - ID4_ SINE ID -9 74 1 3 1330 400 149 0 0 chr13 97725773 97725840 -22558472 + ORR1D1 LTR MaLR 308 374 0 3 1330 872 248 81 4 chr13 97725840 97726111 -22558201 + MTE-int LTR MaLR 1259 1550 -30 3 1330 395 304 62 7 chr13 97726114 97726260 -22558052 + RSINE1 SINE B4 2 155 -10 3 1330 2700 98 76 5 chr13 97726604 97727012 -22557300 - RLTR9B LTR ERVK 0 437 1 3 1330 228 35 0 0 chr13 97727579 97727608 -22556704 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 3 1330 406 294 70 16 chr13 97727838 97727966 -22556346 - B1F1 SINE Alu -12 137 3 3 1330 299 366 95 40 chr13 97728186 97728252 -22556060 + L2a LINE L2 3031 3101 -325 3 1330 189 0 0 0 chr13 97728252 97728273 -22556039 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1330 299 366 95 40 chr13 97728273 97728553 -22555759 + L2a LINE L2 3102 3396 -30 3 1330 1400 147 9 18 chr13 97729222 97729450 -22554862 - URR1A DNA MER1_type 0 226 1 3 1330 21 0 0 0 chr13 97729739 97729760 -22554552 + AT_rich Low_complexity Low_complexity 1 21 0 3 1330 642 254 21 62 chr13 97729788 97729921 -22554391 + B3A SINE B2 12 147 -51 3 1330 333 68 0 0 chr13 97729921 97729965 -22554347 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1330 642 254 21 62 chr13 97729965 97730024 -22554288 + B3A SINE B2 148 196 -2 3 1330 256 264 115 69 chr13 97730158 97730288 -22554024 + MER58B DNA MER1_type 206 341 0 3 1330 536 316 126 29 chr13 97730995 97731232 -22553080 - MER2 DNA MER2_type 0 345 106 3 1330 243 0 0 0 chr13 97731232 97731259 -22553053 + (TA)n Simple_repeat Simple_repeat 1 27 0 3 1330 536 316 126 29 chr13 97731259 97731331 -22552981 - MER2 DNA MER2_type -240 105 6 3 1330 354 315 111 35 chr13 97731527 97731723 -22552589 - HAL1 LINE L1 -815 1692 1488 3 1330 1003 230 9 5 chr13 97731723 97731933 -22552379 - B3 SINE B2 -5 211 1 3 1330 354 315 111 35 chr13 97731933 97732105 -22552207 - HAL1 LINE L1 -1020 1487 1296 3 1330 387 0 0 0 chr13 97732149 97732192 -22552120 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1330 232 245 0 0 chr13 97732212 97732261 -22552051 - B2_Mm2 SINE B2 -65 130 82 3 1330 484 212 199 42 chr13 97732261 97732522 -22551790 + L1MC LINE L1 2865 3166 -2980 3 1330 237 185 18 18 chr13 97732518 97732573 -22551739 + L1MC LINE L1 3379 3433 -2713 3 1330 284 310 17 26 chr13 97733906 97734022 -22550290 + MLT1C LTR MaLR 1 115 -352 3 1330 282 350 16 24 chr13 97734074 97734200 -22550112 + MLT1C LTR MaLR 257 381 -9 3 1330 279 0 0 0 chr13 97734484 97734515 -22549797 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1330 651 297 142 14 chr13 97735156 97735570 -22548742 + MER31A LTR ERV1 17 483 -2 3 1330 261 0 0 0 chr13 97735787 97735816 -22548496 + (TA)n Simple_repeat Simple_repeat 2 30 0 3 1330 265 237 0 17 chr13 97736311 97736371 -22547941 + MIR3 SINE MIR 96 154 -54 3 1330 994 242 54 48 chr13 97736641 97736993 -22547319 - ORR1D2 LTR MaLR -2 368 15 3 1330 286 259 23 23 chr13 97737069 97737156 -22547156 - L1MEc LINE L1 -3277 3042 2956 3 1330 510 316 85 34 chr13 97737161 97737597 -22546715 - L1MEc LINE L1 -5907 493 36 3 1330 1089 75 110 0 chr13 97737669 97737842 -22546470 + B2_Mm1t SINE B2 2 193 0 3 1330 834 299 30 51 chr13 97737855 97738190 -22546122 + ORR1E LTR MaLR 32 359 0 3 1330 2605 60 9 3 chr13 97738197 97738533 -22545779 + L1Md_F2 LINE L1 6243 6580 -2 3 1330 550 278 273 18 chr13 97738534 97738929 -22545383 + ORR1E-int LTR MaLR 6 501 -1079 3 1330 390 218 81 0 chr13 97739079 97739203 -22545109 - Lx7 LINE L1 0 7696 7563 3 1330 1975 142 17 25 chr13 97739665 97740027 -22544285 + ORR1B2 LTR MaLR 1 359 -8 3 1330 376 191 169 0 chr13 97740030 97740119 -22544193 + RSINE1 SINE B4 29 132 -33 3 1330 329 314 12 0 chr13 97740913 97740999 -22543313 + B3 SINE B2 2 88 -128 3 1330 1030 215 113 23 chr13 97741347 97741647 -22542665 + MTD LTR MaLR 5 331 -88 4 1330 232 329 69 50 chr13 97741634 97741794 -22542518 + MamRep1879 DNA hAT? 40 202 -14 4 1330 198 0 0 0 chr13 97742716 97742738 -22541574 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 4 1330 274 289 0 0 chr13 97743056 97743132 -22541180 + (CA)n Simple_repeat Simple_repeat 1 76 0 4 1330 631 295 106 28 chr13 97743134 97743567 -22540745 - RLTR12B LTR ERVK -14 514 48 4 1330 780 134 0 0 chr13 97743591 97743725 -22540587 + (CA)n Simple_repeat Simple_repeat 2 135 0 4 1330 331 308 58 0 chr13 97743901 97744005 -22540307 - PB1D10 SINE Alu -7 110 1 4 1330 1201 41 0 26 chr13 97744089 97744241 -22540071 + B1_Mus1 SINE Alu 1 148 0 4 1330 236 297 14 0 chr13 97744474 97744548 -22539764 + B4 SINE B4 5 79 -213 4 1330 739 163 0 10 chr13 97744756 97745154 -22539158 + (TTGG)n Simple_repeat Simple_repeat 1 393 0 4 1330 265 212 61 0 chr13 97745164 97745230 -22539082 - ID4 SINE ID -12 71 2 4 1330 626 259 73 31 chr13 97745742 97746023 -22538289 + RLTR15 LTR ERVK 3 296 -63 4 1330 243 0 0 0 chr13 97746023 97746050 -22538262 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 4 1330 626 259 73 31 chr13 97746050 97746095 -22538217 + RLTR15 LTR ERVK 297 342 -17 4 1330 399 179 0 0 chr13 97746637 97746743 -22537569 + (CCAA)n Simple_repeat Simple_repeat 3 108 0 4 1330 786 167 0 0 chr13 97746763 97746943 -22537369 + (CCAA)n Simple_repeat Simple_repeat 1 180 0 4 1330 512 275 134 90 chr13 97747777 97748121 -22536191 + ORR1E LTR MaLR 1 359 0 4 1330 1442 76 22 0 chr13 97748922 97749107 -22535205 + B2_Mm2 SINE B2 1 189 -6 4 1330 495 0 0 0 chr13 97749280 97749335 -22534977 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 1330 356 252 194 0 chr13 97749345 97749448 -22534864 + B1F SINE Alu 20 142 -7 4 1330 234 220 34 0 chr13 97749725 97749784 -22534528 - B1_Mus1 SINE Alu -60 88 28 4 1330 885 248 48 30 chr13 97750083 97750168 -22534144 - MLT2B4 LTR ERVL -188 368 288 4 1330 1061 213 197 111 chr13 97750168 97750306 -22534006 + MTD LTR MaLR 1 121 -298 4 1330 180 111 0 0 chr13 97750306 97750333 -22533979 + (TTTAG)n Simple_repeat Simple_repeat 3 29 0 4 1330 1195 74 0 0 chr13 97750336 97750484 -22533828 - B1_Mus1 SINE Alu 0 148 1 4 1330 1061 213 197 111 chr13 97750484 97750727 -22533585 + MTD LTR MaLR 122 419 0 4 1330 885 248 48 30 chr13 97750727 97750936 -22533376 - MLT2B4 LTR ERVL -269 287 73 4 1330 338 302 104 32 chr13 97750936 97751090 -22533222 + RSINE1 SINE B4 1 165 0 4 1330 1286 14 7 0 chr13 97751576 97751722 -22532590 + B1_Mm SINE Alu 1 147 0 4 1330 410 257 69 7 chr13 97752424 97752569 -22531743 - MER57F LTR ERV1 -136 300 147 4 1330 429 54 0 0 chr13 97752594 97752650 -22531662 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1330 462 296 96 27 chr13 97752699 97752959 -22531353 - B4A SINE B4 -14 278 1 4 1330 487 216 78 0 chr13 97752988 97753104 -22531208 - MER57F LTR ERV1 -296 140 16 4 1330 313 311 56 56 chr13 97753169 97753361 -22530951 + MER63A DNA AcHobo 27 201 -9 4 1330 360 0 0 0 chr13 97754389 97754429 -22529883 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1330 727 191 20 0 chr13 97754657 97754804 -22529508 - URR1A DNA MER1_type -24 202 53 4 1330 386 274 10 0 chr13 97754950 97755052 -22529260 + MER44D DNA MER2_type 11 113 -592 4 1330 654 285 132 29 chr13 97755049 97755189 -22529123 + MER44D DNA MER2_type 323 490 -215 4 1330 445 74 24 24 chr13 97755189 97755272 -22529040 + (CAGAGA)n Simple_repeat Simple_repeat 2 84 0 4 1330 654 285 132 29 chr13 97755272 97755442 -22528870 + MER44D DNA MER2_type 491 664 -41 4 1330 293 0 27 0 chr13 97755443 97755480 -22528832 + (TC)n Simple_repeat Simple_repeat 1 38 0 4 1330 819 184 0 7 chr13 97757224 97757366 -22526946 - B1_Mur1 SINE Alu -8 141 1 4 1330 621 239 147 0 chr13 97757442 97757626 -22526686 + B3 SINE B2 5 215 -1 4 1330 950 56 87 0 chr13 97757678 97757804 -22526508 + B1_Mus1 SINE Alu 1 137 -11 4 1330 980 40 8 0 chr13 97757805 97757930 -22526382 + (GAAA)n Simple_repeat Simple_repeat 3 128 0 4 1330 437 292 142 35 chr13 97758025 97758339 -22525973 + MER34 LTR ERV1 27 421 -121 4 1330 1270 190 100 24 chr13 97758346 97758675 -22525637 - ORR1D2 LTR MaLR -12 358 5 4 1330 519 189 94 0 chr13 97758685 97758790 -22525522 - ORR1D2-int LTR MaLR -7 1363 1249 4 1330 785 232 55 0 chr13 97758790 97758954 -22525358 + B3 SINE B2 2 174 -42 4 1330 348 326 0 0 chr13 97759941 97760027 -22524285 - PB1D7 SINE Alu -3 117 32 4 1330 411 227 133 0 chr13 97761750 97761878 -22522434 + B1_Mur2 SINE Alu 5 149 0 4 1330 1415 75 27 0 chr13 97761929 97762115 -22522197 + B2_Mm2 SINE B2 2 192 -3 4 1330 741 159 120 18 chr13 97762240 97762314 -22521998 - RMER17C LTR ERVK -226 184 94 4 1330 912 36 0 0 chr13 97762314 97762426 -22521886 + (GGGAA)n Simple_repeat Simple_repeat 4 115 0 4 1330 741 159 120 18 chr13 97762426 97762518 -22521794 - RMER17C LTR ERVK -317 93 2 4 1330 290 300 70 82 chr13 97762548 97762865 -22521447 - MLT1D LTR MaLR -91 414 17 4 1330 1151 55 14 7 chr13 97762953 97763099 -22521213 - B1_Mus1 SINE Alu 0 148 2 4 1330 339 242 9 66 chr13 97763962 97764068 -22520244 + PB1D10 SINE Alu 9 108 -9 4 1330 234 0 0 0 chr13 97764578 97764604 -22519708 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 4 1330 887 135 28 14 chr13 97764606 97764749 -22519563 - B1_Mur4 SINE Alu -4 146 2 4 1330 25 0 0 0 chr13 97764754 97764779 -22519533 + AT_rich Low_complexity Low_complexity 1 25 0 4 1330 625 232 57 21 chr13 97764780 97764974 -22519338 - B3A SINE B2 -2 214 14 4 1330 1245 48 0 0 chr13 97764975 97765121 -22519191 + B1_Mus2 SINE Alu 2 147 0 4 1330 1652 42 0 0 chr13 97765802 97765995 -22518317 - B2_Mm1a SINE B2 0 193 1 4 1330 1249 104 12 0 chr13 97766062 97766235 -22518077 + B2_Mm1t SINE B2 5 179 -14 4 1330 336 90 345 0 chr13 97766282 97766392 -22517920 + B2_Mm2 SINE B2 47 194 -1 4 1330 1319 96 11 0 chr13 97766394 97766572 -22517740 + B2_Mm1t SINE B2 1 180 -13 4 1330 216 0 0 0 chr13 97766575 97766599 -22517713 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 4 1330 25 51 0 0 chr13 97766608 97766647 -22517665 + AT_rich Low_complexity Low_complexity 1 39 0 4 1330 192 200 0 0 chr13 97766674 97766714 -22517598 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 4 1330 1032 176 202 16 chr13 97766879 97767065 -22517247 - ORR1C2 LTR MaLR -2 382 185 4 1330 318 115 0 0 chr13 97767065 97767126 -22517186 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 1330 1032 187 203 15 chr13 97767126 97767212 -22517100 - ORR1C2 LTR MaLR -200 184 43 4 1330 469 189 21 64 chr13 97767217 97767358 -22516954 - ORR1C2 LTR MaLR -239 135 1 4 1330 2490 165 81 33 chr13 97767689 97768198 -22516114 + RMER16 LTR ERVK 1 533 0 4 1330 487 276 40 29 chr13 97768816 97769075 -22515237 + RMER20A LTR ERVK 234 492 -135 4 1330 244 295 26 0 chr13 97769274 97769352 -22514960 + MTEa LTR MaLR 293 372 -7 4 1330 6612 92 3 28 chr13 97769413 97770285 -22514027 + L1VL4 LINE L1 191 1045 -2514 4 1330 1420 86 37 0 chr13 97770285 97770472 -22513840 + B2_Mm2 SINE B2 1 194 -1 4 1330 6612 60 12 55 chr13 97770472 97771274 -22513038 + L1VL4 LINE L1 1046 1817 -1742 4 1330 7494 108 3 14 chr13 97771272 97772678 -22511634 + Lx2 LINE L1 5262 6650 -347 4 1330 1379 106 22 17 chr13 97772662 97772893 -22511419 + Lx2 LINE L1 6765 6996 -1 4 1330 275 276 11 33 chr13 97773166 97773256 -22511056 - MLT1C LTR MaLR 0 467 380 4 1330 1511 67 0 5 chr13 97773450 97773644 -22510668 + B2_Mm2 SINE B2 2 194 -1 4 1330 180 0 0 0 chr13 97773644 97773664 -22510648 + (GAAA)n Simple_repeat Simple_repeat 1 20 0 4 1330 418 288 147 0 chr13 97773711 97773881 -22510431 - MER58A DNA MER1_type -29 195 1 4 1330 659 250 7 26 chr13 97774106 97774258 -22510054 + B1F SINE Alu 1 149 0 4 1330 1172 75 0 0 chr13 97774428 97774575 -22509737 - B1_Mus2 SINE Alu 0 147 1 4 1330 1641 22 0 0 chr13 97774658 97774841 -22509471 + B2_Mm1a SINE B2 2 184 -9 4 1330 321 26 0 0 chr13 97774841 97774879 -22509433 + (TTAAA)n Simple_repeat Simple_repeat 3 40 0 4 1330 1031 262 36 11 chr13 97775050 97775328 -22508984 + B4 SINE B4 1 285 -7 4 1330 423 104 37 19 chr13 97775911 97776019 -22508293 + (TG)n Simple_repeat Simple_repeat 1 110 0 4 1330 407 137 22 49 chr13 97776063 97776247 -22508065 + (TG)n Simple_repeat Simple_repeat 1 179 0 4 1330 538 26 0 94 chr13 97776632 97776717 -22507595 + B1_Mm SINE Alu 69 145 -2 4 1330 229 299 12 49 chr13 97776808 97776889 -22507423 + B4A SINE B4 135 212 -80 4 1330 497 261 114 86 chr13 97776972 97777257 -22507055 + RMER13A LTR ERVK 96 393 -467 4 1330 956 67 36 36 chr13 97777257 97777396 -22506916 + B1_Mus2 SINE Alu 4 142 -5 4 1330 497 261 114 86 chr13 97777396 97777471 -22506841 + RMER13A LTR ERVK 394 466 -394 4 1330 2219 130 8 38 chr13 97777938 97778306 -22506006 + RLTR20A LTR ERVK 1 357 -184 4 1330 206 121 0 0 chr13 97778420 97778453 -22505859 + (CAAAAA)n Simple_repeat Simple_repeat 6 38 0 4 1330 801 216 106 62 chr13 97778792 97779252 -22505060 + RMER10A LTR ERVL 7 418 -24 4 1330 1234 64 98 6 chr13 97779252 97779425 -22504887 - B2_Mm2 SINE B2 -6 189 1 4 1330 540 220 62 108 chr13 97779425 97779455 -22504857 + RMER10A LTR ERVL 419 442 0 4 1331 705 129 165 8 chr13 97779719 97779852 -22504460 - URR1A DNA MER1_type 0 226 73 4 1331 273 271 103 79 chr13 97779904 97780218 -22504094 - Charlie10 DNA MER1_type -103 2509 2168 4 1331 1460 178 47 11 chr13 97780540 97780818 -22503494 + RLTR12B LTR ERVK 1 288 -240 4 1331 1418 149 74 0 chr13 97780821 97780904 -22503408 - RLTR12A LTR ERVK -4 564 482 4 1331 306 0 0 0 chr13 97780904 97780938 -22503374 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1331 1418 149 74 0 chr13 97780938 97781096 -22503216 - RLTR12A LTR ERVK -87 481 306 4 1331 2587 152 13 139 chr13 97781096 97781236 -22503076 + RLTR11A2 LTR ERVK 2 135 -392 4 1331 1247 41 0 0 chr13 97781236 97781383 -22502929 + B1_Mus2 SINE Alu 1 147 0 4 1331 2587 152 13 139 chr13 97781383 97781719 -22502593 + RLTR11A2 LTR ERVK 136 450 -77 4 1331 1120 37 73 0 chr13 97781719 97781855 -22502457 + B1_Mus1 SINE Alu 2 147 -1 4 1331 2587 152 13 139 chr13 97781855 97781934 -22502378 + RLTR11A2 LTR ERVK 451 487 -40 4 1331 2623 49 146 3 chr13 97781934 97782284 -22502028 + MTB LTR MaLR 1 400 0 4 1331 2587 152 13 139 chr13 97782284 97782328 -22501984 + RLTR11A2 LTR ERVK 488 527 0 4 1331 1138 169 203 27 chr13 97782331 97782364 -22501948 - RLTR12A LTR ERVK -261 307 275 4 1331 270 0 0 0 chr13 97782364 97782394 -22501918 + (C)n Simple_repeat Simple_repeat 1 30 0 4 1331 1138 169 203 27 chr13 97782394 97782621 -22501691 - RLTR12A LTR ERVK -294 274 3 4 1331 1174 169 37 29 chr13 97782621 97782863 -22501449 + RLTR12B LTR ERVK 285 528 0 4 1331 1754 139 25 31 chr13 97783084 97783411 -22500901 - RMER10B LTR ERVL 0 398 74 4 1331 821 217 38 44 chr13 97783411 97783894 -22500418 - RMER17C LTR ERVK -523 435 2 4 1331 348 237 145 98 chr13 97783894 97783941 -22500371 - RMER10B LTR ERVL -340 58 1 4 1331 1339 88 44 0 chr13 97783977 97784158 -22500154 + B2_Mm2 SINE B2 1 189 -6 5 1331 1149 61 152 0 chr13 97784219 97784384 -22499928 + B2_Mm2 SINE B2 2 191 -4 5 1331 1803 144 131 27 chr13 97784473 97784809 -22499503 + RLTR41 LTR ERV1 2 372 -74 5 1331 284 297 78 0 chr13 97785348 97785476 -22498836 + RMER17C-int LTR ERVK 3025 3162 -76 5 1331 1775 133 48 212 chr13 97785522 97785998 -22498314 + RMER10B LTR ERVL 1 398 0 5 1331 659 267 107 107 chr13 97785999 97786431 -22497881 + RLTR19-int LTR ERVK 2606 3037 -3100 5 1331 4308 37 91 0 chr13 97786697 97787214 -22497098 - LTRIS2 LTR ERV1 0 564 1 5 1331 693 112 248 32 chr13 97787224 97787381 -22496931 - B2_Mm2 SINE B2 -1 194 4 5 1331 24 32 0 0 chr13 97787413 97787444 -22496868 + AT_rich Low_complexity Low_complexity 1 31 0 5 1331 572 239 136 42 chr13 97787447 97787661 -22496651 + RMER17C-int LTR ERVK 2627 2860 -378 5 1331 1884 195 40 52 chr13 97788038 97788465 -22495847 + RMER10A LTR ERVL 1 422 -20 5 1331 276 30 0 0 chr13 97788465 97788498 -22495814 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 5 1331 293 273 104 0 chr13 97788941 97789018 -22495294 - Tigger7 DNA MER2_type -2104 387 303 5 1331 1113 81 0 20 chr13 97789019 97789170 -22495142 + B1_Mus1 SINE Alu 1 148 0 5 1331 7715 50 23 0 chr13 97789230 97790180 -22494132 + L1Md_F2 LINE L1 5611 6582 0 5 1331 472 288 42 18 chr13 97790239 97790405 -22493907 + B4A SINE B4 7 176 -116 5 1331 480 330 165 0 chr13 97790601 97790801 -22493511 + Tigger7 DNA MER2_type 83 315 -2176 5 1331 984 71 0 0 chr13 97790807 97790934 -22493378 - B1_Mus2 SINE Alu 0 147 21 5 1331 1249 99 16 37 chr13 97790933 97791122 -22493190 + RLTR23 LTR ERV1 209 393 -37 5 1331 322 268 158 7 chr13 97791273 97791412 -22492900 - RLTR22_Mur LTR ERVK 0 1848 1689 5 1331 230 337 65 121 chr13 97791388 97791587 -22492725 - RMER12 LTR ERVK -141 1181 994 5 1331 207 100 0 0 chr13 97791598 97791628 -22492684 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1331 269 222 78 0 chr13 97791693 97791778 -22492534 - RLTR22_Mur LTR ERVK -825 1023 932 5 1331 1586 88 41 32 chr13 97791778 97792024 -22492288 - RLTR23 LTR ERV1 0 430 183 5 1331 2199 338 31 36 chr13 97792413 97793563 -22490749 - RodERV21-int LTR ERV1 -105 4886 3743 5 1331 1342 58 0 6 chr13 97793572 97793731 -22490581 + B2_Mm1a SINE B2 2 160 -33 5 1331 423 0 0 0 chr13 97793731 97793778 -22490534 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 5 1331 1342 58 0 6 chr13 97793778 97793792 -22490520 + B2_Mm1a SINE B2 161 174 -19 5 1331 1629 330 34 44 chr13 97793800 97794636 -22489676 - RodERV21-int LTR ERV1 -1254 3737 2911 5 1331 295 208 8 44 chr13 97795194 97795307 -22489005 - RodERV21-int LTR ERV1 -2657 4949 4890 5 1331 308 321 81 64 chr13 97795675 97796021 -22488291 - RodERV21-int LTR ERV1 -3232 4374 4023 5 1331 267 38 37 37 chr13 97796302 97796356 -22487956 + (TTTTTG)n Simple_repeat Simple_repeat 1 54 0 5 1331 649 329 28 52 chr13 97796836 97797339 -22486973 - RodERV21-int LTR ERV1 -3015 4076 3586 5 1331 4532 254 16 21 chr13 97797462 97798530 -22485782 - RodERV21-int LTR ERV1 -2273 2718 1657 5 1331 1150 50 0 0 chr13 97798563 97798704 -22485608 - B1_Mus1 SINE Alu -7 141 1 5 1331 1584 293 54 41 chr13 97798704 97799244 -22485068 - RodERV21-int LTR ERV1 -3324 1667 1121 5 1331 917 308 48 21 chr13 97799341 97799713 -22484599 - RodERV21-int LTR ERV1 -3903 1088 707 5 1331 9853 83 21 38 chr13 97800682 97801127 -22483185 - RMER16-int LTR ERVK -865 4541 4090 5 1331 1296 20 0 0 chr13 97801127 97801273 -22483039 + B1_Mus2 SINE Alu 2 147 0 5 1331 9853 83 21 38 chr13 97801273 97802291 -22482021 - RMER16-int LTR ERVK -1317 4089 3102 5 1331 1059 77 28 0 chr13 97802292 97802435 -22481877 + B1_Mus2 SINE Alu 1 147 0 5 1331 1620 149 144 125 chr13 97802449 97803173 -22481139 - RMER16-int LTR ERVK -4563 2843 1566 5 1331 1466 69 5 0 chr13 97803176 97803365 -22480947 + B2_Mm1a SINE B2 1 190 -3 5 1331 1176 75 0 0 chr13 97803371 97803517 -22480795 + B1_Mm SINE Alu 2 147 0 5 1331 180 80 19 74 chr13 97803518 97803572 -22480740 + A-rich Low_complexity Low_complexity 3 53 0 5 1331 494 259 111 30 chr13 97803572 97803800 -22480512 - ETnERV2-int LTR ERVK -5084 2322 2176 5 1331 1869 158 93 125 chr13 97803815 97804279 -22480033 - RMER16 LTR ERVK -84 449 1 5 1331 6877 136 62 81 chr13 97804313 97804779 -22479533 - RMER16-int LTR ERVK -3906 1500 1121 5 1331 315 0 0 0 chr13 97804779 97804814 -22479498 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1331 1043 73 7 0 chr13 97804814 97804950 -22479362 - B1_Mm SINE Alu -9 138 2 5 1331 6877 136 62 81 chr13 97804950 97805347 -22478965 - RMER16-int LTR ERVK -4286 1120 680 5 1331 207 0 0 0 chr13 97805347 97805370 -22478942 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1331 6877 136 62 81 chr13 97805370 97805945 -22478367 - RMER16-int LTR ERVK -4727 679 89 5 1331 344 231 48 67 chr13 97806285 97806431 -22477881 - RLTR8 LTR ERVK 0 375 235 5 1331 664 189 19 57 chr13 97806680 97806837 -22477475 - RMER12 LTR ERVK -1119 203 53 5 1331 4411 22 2 0 chr13 97806838 97807330 -22476982 + MT2_Mm LTR ERVL 1 493 0 5 1331 48470 15 6 0 chr13 97807330 97812656 -22471656 + MERVL-int LTR ERVL 1 5360 -125 5 1331 403 167 46 35 chr13 97812656 97812743 -22471569 + ORR1A3-int LTR MaLR 553 640 -1323 5 1331 265 0 0 0 chr13 97812743 97812774 -22471538 + MERVL-int LTR ERVL 5448 5478 -7 5 1331 4396 24 2 0 chr13 97812781 97813273 -22471039 + MT2_Mm LTR ERVL 1 493 0 5 1331 257 230 0 47 chr13 97813273 97813329 -22470983 - RMER12 LTR ERVK -1266 56 1 5 1331 709 276 69 7 chr13 97813329 97813606 -22470706 + L1MB4 LINE L1 5825 6118 -62 5 1331 198 0 0 0 chr13 97813616 97813638 -22470674 + (CA)n Simple_repeat Simple_repeat 2 23 0 5 1331 342 0 0 0 chr13 97813883 97813921 -22470391 + (TAGA)n Simple_repeat Simple_repeat 1 38 0 5 1331 1217 78 6 12 chr13 97814127 97814285 -22470027 + B2_Mm1a SINE B2 2 160 -33 5 1331 297 0 0 0 chr13 97814285 97814318 -22469994 + (TAAA)n Simple_repeat Simple_repeat 3 35 0 5 1331 456 276 17 17 chr13 97814334 97814452 -22469860 + B1F2 SINE Alu 1 118 -31 5 1331 273 75 0 0 chr13 97814487 97814527 -22469785 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1331 622 164 27 27 chr13 97814722 97814872 -22469440 - Lx9 LINE L1 -2 7642 7493 5 1331 1156 95 0 0 chr13 97814891 97815039 -22469273 + B1_Mus1 SINE Alu 1 148 0 5 1331 541 331 94 58 chr13 97815138 97815414 -22468898 + Tigger7 DNA MER2_type 37 322 -2169 5 1331 258 237 0 63 chr13 97815415 97815478 -22468834 - B1F SINE Alu -88 61 3 5 1331 2885 140 6 40 chr13 97815817 97816292 -22468020 + RMER13B LTR ERVK 1 459 -449 5 1331 239 291 81 96 chr13 97816124 97816322 -22467990 + ORR1B1 LTR MaLR 198 392 -2 5 1331 633 232 0 0 chr13 97816390 97816558 -22467754 + (CA)n Simple_repeat Simple_repeat 1 168 0 5 1331 234 258 0 0 chr13 97816583 97816672 -22467640 + (CA)n Simple_repeat Simple_repeat 2 90 0 5 1331 555 261 0 0 chr13 97816685 97816959 -22467353 + (CA)n Simple_repeat Simple_repeat 1 274 0 5 1331 269 250 66 0 chr13 97816961 97817037 -22467275 - RMER12 LTR ERVK -496 826 746 5 1331 2966 125 110 30 chr13 97817026 97817567 -22466745 - RLTR1D LTR ERV1 -16 589 4 5 1331 539 260 7 0 chr13 97817651 97817805 -22466507 - L1ME2 LINE L1 0 6184 6030 5 1331 985 66 79 22 chr13 97817807 97817946 -22466366 + B1_Mus2 SINE Alu 1 147 0 5 1331 284 236 0 237 chr13 97817948 97818142 -22466170 + RLTR11B LTR ERVK 138 285 -168 5 1331 375 315 48 26 chr13 97818143 97818332 -22465980 + RLTR12B LTR ERVK 297 489 -39 5 1331 351 0 0 0 chr13 97818471 97818510 -22465802 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1331 791 222 26 13 chr13 97818510 97818665 -22465647 - B3A SINE B2 -41 157 1 5 1331 474 207 174 58 chr13 97818850 97819040 -22465272 + B3 SINE B2 1 212 -4 5 1331 309 82 0 0 chr13 97819050 97819099 -22465213 + (A)n Simple_repeat Simple_repeat 1 49 0 5 1331 570 282 41 23 chr13 97819350 97819571 -22464741 - L1ME2 LINE L1 -246 5918 5694 5 1331 1233 34 0 7 chr13 97819587 97819735 -22464577 + B1_Mus2 SINE Alu 1 147 0 5 1331 198 103 0 0 chr13 97819735 97819764 -22464548 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1331 1250 81 41 0 chr13 97819774 97819946 -22464366 + B2_Mm1t SINE B2 1 179 -14 5 1331 1221 41 14 0 chr13 97820057 97820202 -22464110 + B1_Mm SINE Alu 1 147 0 5 1331 443 241 117 29 chr13 97820219 97820356 -22463956 - MER74B LTR ERVL -20 602 454 5 1331 1026 109 12 1 chr13 97820362 97820486 -22463826 + RMER17C LTR ERVK 1 238 -172 5 1331 714 42 50 0 chr13 97820486 97820605 -22463707 + (TC)n Simple_repeat Simple_repeat 1 125 0 5 1331 1026 151 43 10 chr13 97820605 97820763 -22463549 + RMER17C LTR ERVK 239 396 -14 5 1331 1024 45 89 15 chr13 97820768 97820903 -22463409 - B1_Mus2 SINE Alu -2 145 1 5 1331 1154 68 0 13 chr13 97821652 97821790 -22462522 + B1_Mus1 SINE Alu 1 138 -10 5 1331 293 24 49 0 chr13 97821790 97821831 -22462481 + (TAAAA)n Simple_repeat Simple_repeat 2 44 0 5 1331 1154 68 0 13 chr13 97821831 97821842 -22462470 + B1_Mus1 SINE Alu 139 148 0 5 1331 332 314 25 0 chr13 97821850 97821968 -22462344 + MIRb SINE MIR 35 155 -113 5 1331 801 232 155 0 chr13 97821970 97822151 -22462161 + B3 SINE B2 2 210 -6 5 1331 315 156 43 22 chr13 97822153 97822245 -22462067 + (TATG)n Simple_repeat Simple_repeat 1 94 0 5 1331 200 59 29 0 chr13 97822373 97822407 -22461905 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1331 1096 58 7 0 chr13 97822407 97822545 -22461767 - B1_Mus1 SINE Alu -8 140 2 5 1331 1286 82 0 12 chr13 97823110 97823269 -22461043 + B2_Mm2 SINE B2 1 158 -37 5 1331 210 37 0 0 chr13 97823269 97823296 -22461016 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 5 1331 1286 82 0 12 chr13 97823296 97823309 -22461003 + B2_Mm2 SINE B2 159 171 -24 5 1331 201 363 26 9 chr13 97823316 97823430 -22460882 - L2 LINE L2 -964 2455 2340 5 1331 262 320 27 0 chr13 97824566 97824641 -22459671 - ID2 SINE ID -5 78 2 5 1331 24 0 0 0 chr13 97824648 97824672 -22459640 + AT_rich Low_complexity Low_complexity 1 24 0 5 1331 1178 69 0 0 chr13 97824759 97824904 -22459408 + B1_Mus2 SINE Alu 2 146 -1 5 1331 295 73 18 18 chr13 97824912 97824968 -22459344 + (CAAAA)n Simple_repeat Simple_repeat 2 57 0 5 1331 759 108 0 0 chr13 97824968 97825088 -22459224 + (GAAA)n Simple_repeat Simple_repeat 2 121 0 5 1331 554 196 10 0 chr13 97825111 97825208 -22459104 + B1_Mur4 SINE Alu 1 98 -52 5 1331 447 52 0 0 chr13 97825208 97825266 -22459046 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1331 369 297 63 0 chr13 97825333 97825436 -22458876 + B4 SINE B4 122 231 -61 5 1331 601 260 69 31 chr13 97825436 97825595 -22458717 + B3 SINE B2 1 165 -51 5 1331 377 105 0 26 chr13 97825597 97825675 -22458637 + (CAGA)n Simple_repeat Simple_repeat 4 79 0 5 1331 959 25 0 48 chr13 97825773 97825886 -22458426 + B1_Mus1 SINE Alu 27 139 -9 5 1331 1029 149 0 0 chr13 97825886 97826061 -22458251 + (GAA)n Simple_repeat Simple_repeat 2 176 0 5 1331 959 25 0 48 chr13 97826061 97826072 -22458240 + B1_Mus1 SINE Alu 140 145 -3 5 1331 377 211 9 63 chr13 97826099 97826210 -22458102 + PB1D10 SINE Alu 12 116 -1 5 1331 403 281 35 123 chr13 97826483 97826710 -22457602 + ID_B1 SINE B4 2 208 -16 6 1331 420 329 73 99 chr13 97826755 97827069 -22457243 - MLT1A0 LTR MaLR -59 306 1 6 1331 552 259 42 7 chr13 97827252 97827396 -22456916 + B1F1 SINE Alu 1 149 0 6 1331 1162 94 6 0 chr13 97827449 97827609 -22456703 - MTB_Mm LTR MaLR -246 161 1 6 1331 345 264 32 32 chr13 97828320 97828414 -22455898 - RSINE1 SINE B4 -69 96 3 6 1331 327 186 116 116 chr13 97828421 97828494 -22455818 - L1MA5A LINE L1 0 6297 6225 6 1331 272 82 48 16 chr13 97828494 97828556 -22455756 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1331 351 0 0 0 chr13 97828556 97828594 -22455718 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1331 327 186 116 116 chr13 97828594 97828665 -22455647 - L1MA5A LINE L1 -73 6224 6153 6 1331 234 288 48 91 chr13 97828670 97828708 -22455604 - YREP_Mm Unknown Unknown -1468 344 230 6 1331 758 215 23 0 chr13 97828708 97828838 -22455474 + B1_Mur2 SINE Alu 10 142 -7 6 1331 234 288 48 91 chr13 97828838 97828857 -22455455 - YREP_Mm Unknown Unknown -1468 229 166 6 1331 451 378 39 0 chr13 97828883 97829039 -22455273 - RSINE1 SINE B4 0 165 4 6 1331 336 354 0 0 chr13 97829089 97829171 -22455141 + B1_Mur4 SINE Alu 8 89 -61 6 1331 1929 98 29 7 chr13 97829126 97829402 -22454910 + MTA_Mm LTR MaLR 115 396 0 6 1331 312 102 0 0 chr13 97830052 97830101 -22454211 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1331 1280 279 99 18 chr13 97830118 97830622 -22453690 + MER67B LTR ERV1 16 560 -101 6 1331 359 228 0 59 chr13 97830622 97830757 -22453555 + C-rich Low_complexity Low_complexity 2 128 0 6 1331 941 160 0 0 chr13 97831007 97831157 -22453155 - B1_Mur4 SINE Alu 0 150 1 6 1331 247 259 128 12 chr13 97831360 97831446 -22452866 + MTE2a LTR MaLR 273 368 -11 6 1331 275 296 19 58 chr13 97831480 97831584 -22452728 - ID_B1 SINE B4 -4 220 121 6 1331 256 191 0 21 chr13 97831887 97831935 -22452377 - MTE2b LTR MaLR -13 366 320 6 1331 379 239 0 107 chr13 97831928 97831940 -22452372 + B4A SINE B4 81 113 -179 6 1331 442 141 0 27 chr13 97831940 97832013 -22452299 + PB1D9 SINE Alu 2 72 -48 6 1331 379 239 0 107 chr13 97832013 97832031 -22452281 + B4A SINE B4 114 172 -120 6 1331 240 59 0 56 chr13 97832436 97832490 -22451822 + (CCCCCA)n Simple_repeat Simple_repeat 4 54 0 6 1331 1308 276 98 21 chr13 97832675 97833152 -22451160 + Lx8 LINE L1 6814 7327 -146 6 1331 968 202 5 11 chr13 97833156 97833346 -22450966 + B3 SINE B2 3 191 -25 6 1331 632 25 25 0 chr13 97833388 97833469 -22450843 + (GAAA)n Simple_repeat Simple_repeat 3 85 0 6 1331 330 212 146 39 chr13 97833469 97833567 -22450745 - MTE2b LTR MaLR -57 322 213 6 1331 306 0 0 0 chr13 97833741 97833775 -22450537 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1331 647 226 5 89 chr13 97834287 97834548 -22449764 - MTE2a LTR MaLR 0 379 113 6 1331 1350 118 7 44 chr13 97834616 97834890 -22449422 + RMER10B LTR ERVL 1 264 -134 6 1331 699 178 44 84 chr13 97834878 97834957 -22449355 + RMER10B LTR ERVL 195 263 -135 6 1331 2116 91 9 53 chr13 97834957 97835294 -22449018 + RLTRETN_Mm LTR ERVK 1 322 0 6 1331 699 178 44 84 chr13 97835294 97835326 -22448986 + RMER10B LTR ERVL 264 298 -100 6 1331 2033 137 240 0 chr13 97835326 97835685 -22448627 + RLTR41 LTR ERV1 2 446 0 6 1331 699 178 44 84 chr13 97835685 97835775 -22448537 + RMER10B LTR ERVL 299 389 -9 6 1331 1414 85 21 0 chr13 97836028 97836217 -22448095 - B2_Mm2 SINE B2 -1 194 2 6 1331 978 159 16 26 chr13 97836222 97836415 -22447897 - B2_Mm2 SINE B2 -4 191 1 6 1331 355 200 42 125 chr13 97836431 97836551 -22447761 - MTE2a LTR MaLR -207 152 43 6 1331 23 0 0 0 chr13 97836634 97836657 -22447655 + GC_rich Low_complexity Low_complexity 1 23 0 6 1331 245 266 16 0 chr13 97836927 97837063 -22447249 + GA-rich Low_complexity Low_complexity 1 138 0 6 1331 222 37 0 0 chr13 97837296 97837323 -22446989 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1331 500 206 77 84 chr13 97837342 97837485 -22446827 - B1_Mur1 SINE Alu 0 150 9 6 1331 228 260 33 153 chr13 97837371 97837521 -22446791 - MT2B LTR ERVL -338 263 132 6 1331 1204 41 0 0 chr13 97838644 97838790 -22445522 + B1_Mus2 SINE Alu 2 147 0 6 1331 189 0 0 0 chr13 97838790 97838811 -22445501 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1331 688 237 14 72 chr13 97839013 97839098 -22445214 - B3 SINE B2 -19 197 116 6 1331 1675 167 166 3 chr13 97839098 97839423 -22444889 + RLTR14 LTR ERV1 3 380 -2 6 1331 688 237 14 72 chr13 97839423 97839546 -22444766 - B3 SINE B2 -101 115 1 6 1331 253 246 13 40 chr13 97839715 97839791 -22444521 + MIR SINE MIR 74 147 -115 6 1331 219 36 0 0 chr13 97841117 97841145 -22443167 + (GGGTG)n Simple_repeat Simple_repeat 4 31 0 6 1331 258 189 14 42 chr13 97841356 97841428 -22442884 + (CGGG)n Simple_repeat Simple_repeat 1 70 0 6 1331 33 80 0 0 chr13 97841428 97841503 -22442809 + GC_rich Low_complexity Low_complexity 1 75 0 6 1331 23 0 0 0 chr13 97842565 97842588 -22441724 + AT_rich Low_complexity Low_complexity 1 23 0 6 1331 306 0 0 0 chr13 97843488 97843522 -22440790 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1331 405 0 0 0 chr13 97843789 97843834 -22440478 + (TC)n Simple_repeat Simple_repeat 2 46 0 6 1331 216 0 0 0 chr13 97843834 97843857 -22440455 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1331 273 29 0 0 chr13 97843857 97843890 -22440422 + (GA)n Simple_repeat Simple_repeat 1 34 0 6 1331 1455 69 5 21 chr13 97844309 97844502 -22439810 + B2_Mm1a SINE B2 1 190 -3 6 1331 1275 113 38 0 chr13 97846090 97846275 -22438037 - B2_Mm2 SINE B2 -2 193 2 6 1331 514 265 219 31 chr13 97846278 97846629 -22437683 - L1MA4 LINE L1 -474 5826 5410 6 1331 25 31 0 0 chr13 97846632 97846664 -22437648 + AT_rich Low_complexity Low_complexity 1 32 0 6 1331 971 45 44 22 chr13 97846680 97846815 -22437497 - B1_Mus1 SINE Alu -7 141 4 6 1331 426 252 100 8 chr13 97846870 97846990 -22437322 + B1F SINE Alu 14 144 -5 6 1331 182 91 0 29 chr13 97847098 97847132 -22437180 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 6 1331 216 0 0 0 chr13 97847238 97847262 -22437050 + (TTTC)n Simple_repeat Simple_repeat 4 27 0 6 1331 1189 68 0 0 chr13 97847262 97847409 -22436903 - B1_Mus1 SINE Alu 0 148 2 6 1331 192 77 0 0 chr13 97847429 97847455 -22436857 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 6 1331 1346 83 44 0 chr13 97847466 97847646 -22436666 - B2_Mm1t SINE B2 -4 189 2 6 1331 819 73 41 0 chr13 97848003 97848126 -22436186 - B2_Mm1t SINE B2 0 193 66 6 1331 1551 196 56 56 chr13 97848126 97848516 -22435796 + MTC LTR MaLR 22 411 -10 6 1331 1290 27 0 0 chr13 97848535 97848682 -22435630 - B1_Mm SINE Alu 0 147 1 6 1331 895 132 113 16 chr13 97848710 97848895 -22435417 + MTC-int LTR MaLR 1 203 -1055 6 1331 773 196 170 44 chr13 97848917 97848995 -22435317 + MTC-int LTR MaLR 304 393 -865 6 1331 1428 66 16 6 chr13 97848995 97849178 -22435134 + B2_Mm2 SINE B2 2 186 -9 6 1331 243 114 0 0 chr13 97849179 97849223 -22435089 + (CAGA)n Simple_repeat Simple_repeat 2 45 0 6 1331 773 196 170 44 chr13 97849223 97849371 -22434941 + MTC-int LTR MaLR 394 561 -697 6 1331 714 169 54 0 chr13 97849365 97849495 -22434817 + B3 SINE B2 27 163 -53 6 1331 465 66 0 0 chr13 97849495 97849556 -22434756 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1331 501 275 19 38 chr13 97849852 97850011 -22434301 + RMER15 LTR ERVL 2 157 -418 6 1331 823 73 186 0 chr13 97850037 97850161 -22434151 - B1_Mus2 SINE Alu 0 147 1 6 1331 1415 181 122 9 chr13 97850252 97850587 -22433725 + RMER15 LTR ERVL 171 543 -32 6 1331 569 346 22 6 chr13 97850622 97850805 -22433507 - ID_B1 SINE B4 -32 192 7 6 1331 729 269 122 11 chr13 97851373 97851659 -22432653 + MER2 DNA MER2_type 27 344 -1 6 1331 615 128 32 0 chr13 97851848 97851961 -22432351 + ORR1C1 LTR MaLR 1 117 -261 6 1331 2707 126 81 12 chr13 97851961 97852404 -22431908 + RLTR20D LTR ERVK 1 461 -107 6 1331 378 57 0 0 chr13 97852404 97852457 -22431855 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 6 1331 2707 126 81 12 chr13 97852457 97852497 -22431815 + RLTR20D LTR ERVK 462 516 -52 6 1331 429 132 24 0 chr13 97852493 97852576 -22431736 - RLTR20D LTR ERVK -483 85 1 6 1331 481 111 56 0 chr13 97852576 97852655 -22431657 - ORR1C1 LTR MaLR -260 118 35 6 1331 1397 134 63 4 chr13 97852700 97852955 -22431357 + ORR1C1 LTR MaLR 109 378 0 6 1331 836 200 46 32 chr13 97853327 97853544 -22430768 - RLTR20B1 LTR ERVK 0 563 344 6 1331 1200 68 0 0 chr13 97853582 97853730 -22430582 - B1_Mus1 SINE Alu 0 148 1 6 1331 991 156 12 0 chr13 97853738 97853911 -22430401 - B2_Mm1t SINE B2 0 193 19 6 1331 738 65 0 27 chr13 97853903 97854013 -22430299 - B2_Mm2 SINE B2 -88 107 1 6 1331 781 217 139 29 chr13 97854014 97854324 -22429988 - RLTR20B1 LTR ERVK -212 365 21 6 1331 1109 73 0 0 chr13 97855837 97855973 -22428339 + B1_Mus2 SINE Alu 3 138 -9 6 1331 1207 41 0 0 chr13 97856144 97856291 -22428021 - B1_Mus1 SINE Alu 0 148 2 6 1331 262 250 31 0 chr13 97856326 97856390 -22427922 - PB1 SINE Alu -5 122 57 6 1331 207 88 0 0 chr13 97856408 97856442 -22427870 + (CCCCG)n Simple_repeat Simple_repeat 2 35 0 6 1331 185 269 0 37 chr13 97856828 97856882 -22427430 + MIRb SINE MIR 49 100 -168 6 1331 1452 33 32 27 chr13 97857000 97857187 -22427125 + B2_Mm2 SINE B2 3 190 -5 6 1331 846 129 7 28 chr13 97857922 97858066 -22426246 + B1_Mus2 SINE Alu 2 142 -5 6 1331 1470 64 5 0 chr13 97859272 97859460 -22424852 - B2_Mm1a SINE B2 -4 189 1 6 1331 635 164 98 0 chr13 97860385 97860507 -22423805 - B1_Mus1 SINE Alu 0 148 15 6 1331 23 33 0 0 chr13 97860517 97860547 -22423765 + AT_rich Low_complexity Low_complexity 1 30 0 6 1331 751 229 30 6 chr13 97860547 97860714 -22423598 - B3 SINE B2 -6 210 40 6 1331 2295 162 30 24 chr13 97860714 97861208 -22423104 + RLTR28 LTR ERVL 1 497 -27 6 1331 274 114 45 0 chr13 97861234 97861278 -22423034 - B3A SINE B2 -152 46 1 6 1331 469 207 86 36 chr13 97861426 97861566 -22422746 - B1F SINE Alu -2 147 1 6 1331 359 288 50 0 chr13 97862045 97862205 -22422107 + (TG)n Simple_repeat Simple_repeat 2 169 0 6 1331 521 285 32 0 chr13 97862765 97862888 -22421424 - RSINE1 SINE B4 -31 134 8 6 1331 1225 28 7 0 chr13 97863088 97863233 -22421079 - B1_Mus2 SINE Alu 0 147 2 6 1331 1340 87 43 0 chr13 97864753 97864937 -22419375 + B2_Mm2 SINE B2 2 193 -2 7 1331 1339 217 97 18 chr13 97865580 97865922 -22418390 - ORR1D2 LTR MaLR 0 370 2 7 1331 679 257 91 38 chr13 97865922 97866132 -22418180 + ID_B1 SINE B4 4 224 0 7 1331 24 0 0 0 chr13 97867071 97867095 -22417217 + AT_rich Low_complexity Low_complexity 1 24 0 7 1331 182 62 0 30 chr13 97867980 97868013 -22416299 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 7 1331 1078 100 0 0 chr13 97868014 97868154 -22416158 - B1_Mm SINE Alu -6 141 2 7 1331 240 35 0 0 chr13 97868162 97868191 -22416121 + (T)n Simple_repeat Simple_repeat 1 29 0 7 1331 390 214 14 0 chr13 97868436 97868506 -22415806 + ID4_ SINE ID 8 78 -5 7 1331 618 139 37 9 chr13 97868565 97868674 -22415638 - PB1D9 SINE Alu -7 113 2 7 1331 339 85 0 0 chr13 97869536 97869583 -22414729 + (CA)n Simple_repeat Simple_repeat 1 47 0 7 1331 333 263 94 7 chr13 97869824 97869962 -22414350 - RSINE1 SINE B4 0 165 16 7 1331 396 0 0 0 chr13 97870295 97870339 -22413973 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1331 1717 21 0 0 chr13 97870622 97870815 -22413497 - B2_Mm1a SINE B2 0 193 1 7 1331 1230 48 0 0 chr13 97870842 97870989 -22413323 + B1_Mus1 SINE Alu 2 148 0 7 1331 899 157 7 0 chr13 97871634 97871774 -22412538 - B1_Mus2 SINE Alu -5 142 2 7 1331 438 108 0 0 chr13 97872211 97872276 -22412036 + (TG)n Simple_repeat Simple_repeat 2 66 0 7 1331 843 264 57 21 chr13 97872279 97872558 -22411754 - B4A SINE B4 0 292 4 7 1331 667 66 0 0 chr13 97872902 97872993 -22411319 - B1_Mus2 SINE Alu 0 147 57 7 1331 31 0 0 0 chr13 97873217 97873248 -22411064 + AT_rich Low_complexity Low_complexity 1 31 0 7 1331 1071 91 14 0 chr13 97873293 97873436 -22410876 + B1_Mus1 SINE Alu 1 145 -3 7 1331 189 0 0 0 chr13 97873436 97873457 -22410855 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 7 1331 730 63 27 0 chr13 97873684 97873795 -22410517 - BC1_Mm scRNA scRNA -38 114 1 7 1331 448 154 209 0 chr13 97874408 97874518 -22409794 - B1_Mur4 SINE Alu -17 133 1 7 1331 914 224 35 0 chr13 97874627 97874828 -22409484 - B3 SINE B2 0 216 9 7 1331 266 200 50 50 chr13 97875297 97875397 -22408915 - RLTR42-int LTR ERVK -4122 1400 1301 7 1331 486 0 0 0 chr13 97875400 97875454 -22408858 + (TTTTG)n Simple_repeat Simple_repeat 3 56 0 7 1331 23 0 0 0 chr13 97875912 97875935 -22408377 + AT_rich Low_complexity Low_complexity 1 23 0 7 1331 321 262 214 32 chr13 97875988 97876132 -22408180 - L1MB7 LINE L1 -118 6066 5880 7 1331 612 0 0 0 chr13 97876132 97876200 -22408112 + (TTTC)n Simple_repeat Simple_repeat 1 68 0 7 1331 321 262 214 32 chr13 97876200 97876307 -22408005 - L1MB7 LINE L1 -305 5879 5770 7 1331 272 244 103 0 chr13 97876359 97876437 -22407875 - B3 SINE B2 -103 113 28 7 1331 270 162 117 26 chr13 97876494 97876601 -22407711 - MTEb LTR MaLR -15 364 256 7 1331 27 29 0 0 chr13 97877259 97877293 -22407019 + AT_rich Low_complexity Low_complexity 1 34 0 7 1331 217 244 0 0 chr13 97877299 97877344 -22406968 - PB1D10 SINE Alu -32 85 41 7 1331 288 0 0 0 chr13 97877407 97877439 -22406873 + (CTTG)n Simple_repeat Simple_repeat 2 33 0 7 1331 412 207 24 0 chr13 97877456 97877538 -22406774 + B3 SINE B2 126 209 -7 7 1331 1165 61 0 7 chr13 97877943 97878091 -22406221 + B1_Mus2 SINE Alu 1 147 0 7 1331 1042 190 39 5 chr13 97879610 97879816 -22404496 - B3 SINE B2 -3 213 1 7 1331 2254 137 12 3 chr13 97880205 97880548 -22403764 - ORR1A1 LTR MaLR 0 346 1 7 1331 869 207 62 10 chr13 97880620 97880815 -22403497 + B3 SINE B2 1 205 -11 7 1331 205 203 12 48 chr13 97880823 97880852 -22403460 + A-rich Low_complexity Low_complexity 2 28 0 7 1331 831 157 43 0 chr13 97880852 97880992 -22403320 + B1_Mus2 SINE Alu 2 147 0 7 1331 205 203 12 48 chr13 97880992 97881045 -22403267 + A-rich Low_complexity Low_complexity 29 80 0 7 1331 244 300 37 83 chr13 97881510 97881619 -22402693 - PB1 SINE Alu -3 124 21 7 1331 419 239 35 17 chr13 97881799 97881914 -22402398 - PB1D9 SINE Alu -2 118 2 7 1331 1216 119 32 0 chr13 97882732 97882917 -22401395 - B2_Mm1a SINE B2 -1 192 2 7 1331 286 303 171 8 chr13 97884913 97885036 -22399276 - ID_B1 SINE B4 -148 144 2 7 1331 1239 53 68 45 chr13 97885082 97885259 -22399053 - B2_Mm1t SINE B2 -12 181 1 7 1331 198 0 0 0 chr13 97885279 97885301 -22399011 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1331 866 65 202 0 chr13 97885301 97885425 -22398887 - B1_Mur4 SINE Alu 0 150 2 7 1331 24 0 0 0 chr13 97885428 97885452 -22398860 + AT_rich Low_complexity Low_complexity 1 24 0 7 1331 26 30 0 0 chr13 97885591 97885624 -22398688 + AT_rich Low_complexity Low_complexity 1 33 0 7 1331 413 202 128 8 chr13 97885978 97886103 -22398209 - B1_Mur4 SINE Alu -5 145 6 7 1331 958 191 73 70 chr13 97886238 97886318 -22397994 - ORR1D1-int LTR MaLR 0 1370 1292 7 1331 1396 84 16 0 chr13 97886318 97886508 -22397804 + B2_Mm2 SINE B2 2 194 -1 7 1331 1122 22 73 0 chr13 97886513 97886649 -22397663 + B1_Mm SINE Alu 2 147 0 7 1331 958 191 73 70 chr13 97886649 97886878 -22397434 - ORR1D1-int LTR MaLR -84 1286 1054 7 1331 1582 244 64 55 chr13 97886889 97887361 -22396951 - ORR1D1-int LTR MaLR -892 478 3 7 1331 618 251 273 7 chr13 97887362 97887655 -22396657 - ORR1D1 LTR MaLR -3 371 1 7 1331 786 241 93 5 chr13 97887662 97887866 -22396446 - L1_Rod LINE L1 -51 5796 5575 7 1331 1526 78 5 0 chr13 97888745 97888936 -22395376 - B2_Mm1t SINE B2 0 193 2 7 1331 800 212 15 78 chr13 97889265 97889357 -22394955 - B3 SINE B2 0 216 127 7 1331 717 163 91 56 chr13 97889357 97889500 -22394812 + B1_Mur2 SINE Alu 2 149 0 7 1331 800 212 15 78 chr13 97889500 97889612 -22394700 - B3 SINE B2 -90 126 25 7 1331 243 188 0 0 chr13 97889974 97890022 -22394290 + CT-rich Low_complexity Low_complexity 1 48 0 7 1331 1195 51 0 0 chr13 97890026 97890163 -22394149 - B1_Mus2 SINE Alu -9 138 2 7 1331 796 287 41 44 chr13 97890284 97890554 -22393758 - B4A SINE B4 -23 269 1 7 1331 373 295 102 57 chr13 97890641 97890817 -22393495 - B3A SINE B2 -3 195 12 7 1331 2431 170 17 22 chr13 97891061 97891470 -22392842 - MTB_Mm LTR MaLR 0 407 1 7 1331 776 199 7 40 chr13 97891699 97891851 -22392461 - B1_Mur2 SINE Alu 0 149 3 7 1331 1164 210 116 4 chr13 97893347 97893615 -22390697 + RLTR21 LTR ERVK 13 310 -1262 7 1331 567 148 7 187 chr13 97893615 97893765 -22390547 - RMER6B LTR ERVK 0 461 339 7 1331 697 156 240 0 chr13 97893801 97893955 -22390357 - RMER6B LTR ERVK -270 191 1 7 1331 751 168 118 0 chr13 97893955 97894116 -22390196 + RLTR21 LTR ERVK 351 530 -1042 7 1331 3257 160 102 152 chr13 97894128 97894759 -22389553 - RMER19B LTR ERVK 0 902 271 7 1331 1349 58 115 6 chr13 97894759 97894914 -22389398 + B2_Mm2 SINE B2 2 159 -36 7 1331 198 0 0 0 chr13 97894914 97894936 -22389376 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 7 1331 1349 58 115 6 chr13 97894936 97894954 -22389358 + B2_Mm2 SINE B2 160 194 -1 7 1331 3257 160 102 152 chr13 97894954 97895271 -22389041 - RMER19B LTR ERVK -632 270 1 7 1331 1862 169 87 87 chr13 97895271 97895387 -22388925 + RLTR21 LTR ERVK 527 629 -943 7 1331 1072 80 0 14 chr13 97895387 97895526 -22388786 + B1_Mus1 SINE Alu 1 137 -11 7 1331 1862 169 87 87 chr13 97895526 97895940 -22388372 + RLTR21 LTR ERVK 630 1057 -515 7 1331 468 0 0 0 chr13 97895966 97896018 -22388294 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1331 278 242 175 21 chr13 97896032 97896129 -22388183 + RMER12B LTR ERVK 1292 1403 -1 7 1331 24 0 0 0 chr13 97897623 97897647 -22386665 + AT_rich Low_complexity Low_complexity 1 24 0 7 1331 633 182 165 0 chr13 97898030 97898151 -22386161 - B1_Mur4 SINE Alu -9 141 1 7 1331 1388 77 16 16 chr13 97901548 97901732 -22382580 - B2_Mm1t SINE B2 -9 184 1 7 1331 215 339 60 30 chr13 97904117 97904251 -22380061 + MIRc SINE MIR 5 142 -126 7 1331 551 207 32 32 chr13 97904639 97904764 -22379548 - ID_B1 SINE B4 -15 209 85 7 1331 624 254 115 6 chr13 97904896 97905078 -22379234 + B3 SINE B2 3 204 -12 7 1331 332 99 330 35 chr13 97905724 97905833 -22378479 - B2_Mm2 SINE B2 -7 188 48 7 1331 880 116 37 0 chr13 97905882 97906034 -22378278 - B2_Mm2 SINE B2 -14 179 2 7 1331 1329 27 0 0 chr13 97906258 97906405 -22377907 + B1_Mus1 SINE Alu 2 148 0 7 1331 1263 28 7 0 chr13 97906423 97906566 -22377746 + B1_Mus2 SINE Alu 4 147 0 7 1331 363 296 135 45 chr13 97906603 97907040 -22377272 - L1MB7 LINE L1 -26 6153 5672 7 1331 1702 21 0 5 chr13 97908474 97908662 -22375650 - B2_Mm1a SINE B2 -5 188 2 7 1331 630 181 128 3 chr13 97908665 97908829 -22375483 - B3 SINE B2 -20 175 1 7 1331 913 180 0 13 chr13 97908970 97909122 -22375190 - B1_Mur4 SINE Alu 0 150 1 7 1331 207 0 0 0 chr13 97909792 97909815 -22374497 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1331 988 70 0 0 chr13 97909815 97909943 -22374369 - B1_Mus1 SINE Alu -9 139 12 7 1331 398 219 0 102 chr13 97909851 97909978 -22374334 - MT2B LTR ERVL -344 257 144 7 1331 1053 131 0 14 chr13 97910413 97910560 -22373752 - B1_Mus2 SINE Alu -2 145 1 7 166 595 276 31 0 chr13 97910720 97910847 -22373465 - RSINE1 SINE B4 -33 132 2 7 1332 380 247 32 37 chr13 97911289 97911422 -22372890 - PB1D10 SINE Alu -17 131 2 7 1332 303 24 0 0 chr13 97911532 97911574 -22372738 - B1_Mur4 SINE Alu 0 150 109 7 1332 1221 58 0 0 chr13 97911667 97911806 -22372506 - B1_Mus1 SINE Alu -8 140 2 7 1332 208 143 0 0 chr13 97911841 97911876 -22372436 + (T)n Simple_repeat Simple_repeat 1 35 0 7 1332 507 78 0 0 chr13 97912248 97912325 -22371987 + (TC)n Simple_repeat Simple_repeat 1 77 0 7 1332 261 0 0 0 chr13 97912329 97912358 -22371954 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1332 483 252 0 0 chr13 97912781 97912880 -22371432 - PB1D10 SINE Alu -17 100 2 7 1332 289 337 30 0 chr13 97913997 97914098 -22370214 + PB1D10 SINE Alu 7 110 -7 7 1332 626 204 63 35 chr13 97914109 97914243 -22370069 + B1_Mur1 SINE Alu 1 140 -9 8 1332 182 37 37 0 chr13 97914243 97914270 -22370042 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 8 1332 1695 43 0 0 chr13 97914488 97914675 -22369637 + B2_Mm1a SINE B2 2 188 -5 8 1332 798 194 0 40 chr13 97914815 97914965 -22369347 - B1_Mus1 SINE Alu -2 146 3 8 1332 378 0 0 0 chr13 97915309 97915351 -22368961 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1332 189 180 0 0 chr13 97916675 97916725 -22367587 + (TG)n Simple_repeat Simple_repeat 1 50 0 8 1332 334 333 44 0 chr13 97916726 97916840 -22367472 + LTR87 LTR ERVL? 504 622 -2 8 1332 316 304 0 0 chr13 97917089 97917214 -22367098 + (TG)n Simple_repeat Simple_repeat 2 126 0 8 1332 654 236 7 34 chr13 97917920 97918069 -22366243 + B1F1 SINE Alu 1 145 -4 8 1332 785 81 8 0 chr13 97918091 97918214 -22366098 + (TG)n Simple_repeat Simple_repeat 2 125 0 8 1332 350 164 0 0 chr13 97918380 97918435 -22365877 + B1_Mus2 SINE Alu 1 55 -92 8 1332 326 212 71 59 chr13 97918435 97918464 -22365848 + ID_B1 SINE B4 82 166 -58 8 1332 1276 61 0 0 chr13 97918478 97918626 -22365686 - B1_Mus1 SINE Alu 0 148 1 8 1332 658 293 102 0 chr13 97919448 97919714 -22364598 - L1MB2 LINE L1 0 6171 5879 8 1332 279 0 0 0 chr13 97919776 97919807 -22364505 + (TG)n Simple_repeat Simple_repeat 2 32 0 8 1332 925 292 136 3 chr13 97919809 97920111 -22364201 - MER2 DNA MER2_type -3 342 1 8 1332 287 233 20 91 chr13 97920129 97920228 -22364084 - L1MB2 LINE L1 -465 5706 5615 8 1332 447 331 82 93 chr13 97920578 97921018 -22363294 - LTR40b LTR ERVL 0 462 28 8 1332 457 268 59 97 chr13 97921009 97921195 -22363117 + B4 SINE B4 43 221 -71 8 1332 848 151 36 0 chr13 97921060 97921199 -22363113 + B1_Mur4 SINE Alu 6 149 -1 8 1332 1348 91 16 11 chr13 97921204 97921393 -22362919 + B2_Mm1t SINE B2 2 191 -2 8 1332 592 181 157 52 chr13 97921565 97921699 -22362613 - B1_Mur2 SINE Alu -1 148 1 8 1332 292 253 0 132 chr13 97921618 97921709 -22362603 - MT2B LTR ERVL -363 238 160 8 1332 1285 28 7 0 chr13 97922081 97922226 -22362086 - B1_Mus2 SINE Alu 0 147 2 8 1332 345 206 184 37 chr13 97922262 97922398 -22361914 + L1ME2z LINE L1 6034 6189 -255 8 1332 251 214 86 67 chr13 97922649 97922754 -22361558 - YREP_Mm Unknown Unknown -1450 362 256 8 1332 606 242 23 0 chr13 97922698 97922826 -22361486 + ID_B1 SINE B4 87 217 -7 8 1332 1334 223 59 24 chr13 97924152 97924651 -22359661 - BGLII_B LTR ERVK 0 553 46 8 1332 454 275 16 32 chr13 97925776 97925900 -22358412 - B3 SINE B2 -10 206 85 8 1332 243 284 23 58 chr13 97925924 97925939 -22358373 - ID SINE ID -135 89 7 8 1332 302 203 42 99 chr13 97925939 97926010 -22358302 - tRNA-Ala-GCY_ tRNA tRNA -8 67 1 8 1332 538 234 114 23 chr13 97926252 97926383 -22357929 + B1F SINE Alu 2 144 -5 8 1332 312 268 235 29 chr13 97926928 97927132 -22357180 - MIR SINE MIR -16 246 1 8 1332 267 152 0 0 chr13 97927134 97927180 -22357132 + CT-rich Low_complexity Low_complexity 2 47 0 8 1332 654 230 36 0 chr13 97927189 97927328 -22356984 - B1_Mur1 SINE Alu 0 149 6 8 1332 304 347 62 68 chr13 97927195 97927356 -22356956 - B4 SINE B4 -72 220 61 8 1332 294 29 0 0 chr13 97927429 97927464 -22356848 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 1332 1251 68 0 0 chr13 97927509 97927656 -22356656 + B1_Mus2 SINE Alu 1 147 0 8 1332 949 195 162 0 chr13 97927961 97928146 -22356166 + B3 SINE B2 2 216 0 8 1332 875 266 211 3 chr13 97928224 97928594 -22355718 + L1MB2 LINE L1 5691 6137 -34 8 1332 509 226 34 34 chr13 97929168 97929287 -22355025 - PB1D7 SINE Alu 0 120 2 8 1332 1727 26 11 0 chr13 97929714 97929905 -22354407 - B2_Mm1a SINE B2 0 193 1 8 1332 463 274 73 84 chr13 97930395 97930670 -22353642 + Lx9 LINE L1 6806 7077 -567 8 1332 238 345 87 13 chr13 97931516 97931666 -22352646 - Charlie4z DNA MER1_type -1 166 6 8 1332 1726 22 0 0 chr13 97931695 97931878 -22352434 - B2_Mm1a SINE B2 -9 184 2 8 1332 360 111 0 0 chr13 97932172 97932226 -22352086 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 8 1332 318 106 0 0 chr13 97932285 97932332 -22351980 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 8 1332 387 0 0 0 chr13 97932392 97932435 -22351877 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 8 1332 288 53 0 0 chr13 97933420 97933458 -22350854 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1332 302 336 89 7 chr13 97933466 97933601 -22350711 + HAL1-3A_ME LINE L1 2294 2439 -419 8 1332 226 164 0 35 chr13 97933601 97933658 -22350654 + GA-rich Low_complexity Low_complexity 2 56 0 8 1332 267 233 0 0 chr13 97933710 97933770 -22350542 - B1F SINE Alu -23 126 67 8 1332 199 302 40 50 chr13 97933874 97933975 -22350337 + L2a LINE L2 3314 3413 -13 8 1332 914 148 30 0 chr13 97934201 97934336 -22349976 - B1_Mus2 SINE Alu -8 139 1 8 1332 273 89 0 0 chr13 97934567 97934612 -22349700 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 8 1332 183 162 0 0 chr13 97935317 97935354 -22348958 + T-rich Low_complexity Low_complexity 1 37 0 8 1332 1265 61 0 0 chr13 97935369 97935516 -22348796 - B1_Mus1 SINE Alu -1 147 1 8 1332 749 193 20 40 chr13 97935519 97935670 -22348642 - B1_Mus1 SINE Alu 0 148 1 8 1332 181 254 73 0 chr13 97935882 97935937 -22348375 + MER5B DNA MER1_type 92 150 -28 8 1332 1235 41 14 0 chr13 97936069 97936214 -22348098 + B1_Mus2 SINE Alu 1 147 0 8 1332 703 271 69 0 chr13 97936386 97936550 -22347762 + B3 SINE B2 1 171 -45 8 1332 252 0 0 0 chr13 97936550 97936578 -22347734 + (TA)n Simple_repeat Simple_repeat 1 28 0 8 1332 703 271 69 0 chr13 97936578 97936601 -22347711 + B3 SINE B2 172 200 -16 8 1332 529 211 133 69 chr13 97936733 97936921 -22347391 + B3 SINE B2 2 201 -15 8 1332 380 219 12 0 chr13 97936975 97937057 -22347255 - MER33 DNA MER1_type -189 135 53 8 1332 207 254 133 37 chr13 97937364 97937499 -22346813 + L2 LINE L2 2818 2965 -454 8 1332 4547 21 0 0 chr13 97937691 97938173 -22346139 - LTRIS_Mm LTR ERV1 0 482 1 8 1332 1299 41 0 0 chr13 97938524 97938670 -22345642 - B1_Mus2 SINE Alu 0 147 2 8 1332 1293 47 0 0 chr13 97938809 97938957 -22345355 + B1_Mus1 SINE Alu 1 148 0 8 1332 346 232 14 0 chr13 97939079 97939148 -22345164 + B1_Mus1 SINE Alu 1 70 -78 8 1332 7004 57 24 25 chr13 97939158 97939994 -22344318 - L1_Mus3 LINE L1 0 6638 5798 8 1332 198 0 0 0 chr13 97939994 97940016 -22344296 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 8 1332 1158 65 0 28 chr13 97940020 97940163 -22344149 - B1_Mm SINE Alu -7 140 2 8 1332 7004 57 24 25 chr13 97940163 97940257 -22344055 - L1_Mus3 LINE L1 -841 5797 5704 8 1332 504 167 24 0 chr13 97940257 97940341 -22343971 + B1_Mur1 SINE Alu 57 142 -7 8 1332 341 319 25 41 chr13 97940380 97940501 -22343811 + PB1D7 SINE Alu 1 119 -1 8 1332 910 239 101 0 chr13 97940507 97940695 -22343617 + B3 SINE B2 2 208 -8 8 1332 250 289 196 56 chr13 97940704 97940847 -22343465 + RSINE1 SINE B4 3 165 0 8 1332 252 195 0 0 chr13 97941205 97941248 -22343064 + T-rich Low_complexity Low_complexity 40 82 0 8 1332 1235 68 0 0 chr13 97941248 97941394 -22342918 - B1_Mm SINE Alu 0 147 2 8 1332 252 195 0 0 chr13 97941394 97941432 -22342880 + T-rich Low_complexity Low_complexity 2 39 0 8 1332 180 0 0 0 chr13 97942067 97942087 -22342225 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 8 1332 220 253 47 81 chr13 97942684 97942770 -22341542 - ID4_ SINE ID 0 83 1 8 1332 383 237 196 51 chr13 97943091 97943229 -22341083 + RSINE1 SINE B4 2 159 -6 8 1332 23 0 0 0 chr13 97943469 97943492 -22340820 + AT_rich Low_complexity Low_complexity 1 23 0 8 1332 973 137 112 12 chr13 97943610 97943780 -22340532 - B2_Mm2 SINE B2 -6 189 3 8 1332 232 233 32 48 chr13 97945888 97945951 -22338361 - ORR1D2 LTR MaLR -18 361 300 8 1332 453 306 35 0 chr13 97945955 97946099 -22338213 - ORR1D2 LTR MaLR -214 156 8 8 1332 321 204 192 10 chr13 97946130 97946229 -22338083 - B3A SINE B2 -79 119 3 8 1332 51 17 0 0 chr13 97947418 97947476 -22336836 + AT_rich Low_complexity Low_complexity 1 58 0 8 1332 994 139 22 28 chr13 97948371 97948549 -22335763 - B2_Mm2 SINE B2 -17 178 2 8 1332 245 246 192 60 chr13 97948731 97948913 -22335399 - B4A SINE B4 -6 286 81 8 1332 812 159 278 0 chr13 97949930 97950106 -22334206 - URR1B DNA MER1_type 0 225 1 8 1332 315 217 140 9 chr13 97951367 97951474 -22332838 - B1F SINE Alu 0 149 29 8 1332 367 228 36 115 chr13 97952045 97952184 -22332128 - Tigger5 DNA MER2_type -2 2404 2277 8 1332 233 329 105 0 chr13 97952241 97952317 -22331995 - Tigger5 DNA MER2_type -2275 131 48 8 1332 728 68 246 8 chr13 97952591 97952709 -22331603 - B1_Mm SINE Alu -1 146 1 8 1332 380 288 103 29 chr13 97953159 97953295 -22331017 - MIR SINE MIR -111 151 6 8 1332 22 0 0 0 chr13 97954540 97954562 -22329750 + AT_rich Low_complexity Low_complexity 1 22 0 8 1332 455 156 40 121 chr13 97954874 97954969 -22329343 + ID_B1 SINE B4 111 198 -26 8 1332 492 168 227 0 chr13 97954969 97955088 -22329224 - B1_Mus2 SINE Alu 0 147 2 8 1332 455 156 40 121 chr13 97955088 97955116 -22329196 + ID_B1 SINE B4 199 224 0 8 1332 297 0 0 0 chr13 97955713 97955746 -22328566 + (T)n Simple_repeat Simple_repeat 1 33 0 8 1332 185 290 194 0 chr13 97956187 97956311 -22328001 + L3 LINE CR1 3820 3967 -522 8 1332 1030 268 199 5 chr13 97956486 97956873 -22327439 + MER21B LTR ERV1 276 737 -126 8 1332 498 294 186 43 chr13 97957014 97957858 -22326454 + L1MC4 LINE L1 6602 7592 -450 8 1332 24 32 0 0 chr13 97958182 97958213 -22326099 + AT_rich Low_complexity Low_complexity 1 31 0 9 1332 26 0 0 0 chr13 97959036 97959062 -22325250 + AT_rich Low_complexity Low_complexity 1 26 0 9 1332 863 134 0 22 chr13 97959658 97959795 -22324517 + B1_Mus1 SINE Alu 15 148 0 9 1332 785 33 0 0 chr13 97960498 97960589 -22323723 - LSU-rRNA_Hsa rRNA rRNA -2592 2443 2353 9 1332 642 123 148 0 chr13 97960736 97960858 -22323454 + B1_Mus2 SINE Alu 2 141 -7 9 1332 1162 62 0 7 chr13 97961306 97961453 -22322859 - B1_Mus2 SINE Alu -1 146 1 9 1332 800 78 0 17 chr13 97961459 97961577 -22322735 + (TTTC)n Simple_repeat Simple_repeat 2 117 0 9 1332 1321 67 50 11 chr13 97961582 97961764 -22322548 - B2_Mm2 SINE B2 -6 189 1 9 1332 428 248 22 6 chr13 97962089 97962206 -22322106 + PB1D10 SINE Alu 5 120 -29 9 1332 761 98 34 22 chr13 97962365 97962543 -22321769 + GA-rich Low_complexity Low_complexity 1 180 0 9 1332 221 57 29 0 chr13 97962550 97962585 -22321727 + (GA)n Simple_repeat Simple_repeat 2 37 0 9 1332 749 48 0 0 chr13 97963266 97963369 -22320943 + L1Md_T LINE L1 6480 6582 0 9 1332 21 0 0 0 chr13 97963451 97963472 -22320840 + AT_rich Low_complexity Low_complexity 1 21 0 9 1332 195 69 0 0 chr13 97963796 97963825 -22320487 + (CA)n Simple_repeat Simple_repeat 2 30 0 9 1332 292 243 27 13 chr13 97964382 97964457 -22319855 + B3 SINE B2 138 213 -3 9 1332 330 132 0 0 chr13 97964491 97964544 -22319768 + (TA)n Simple_repeat Simple_repeat 2 54 0 9 1332 650 143 167 0 chr13 97964561 97964687 -22319625 + B1_Mus1 SINE Alu 1 147 -1 9 1332 979 16 16 8 chr13 97964695 97964820 -22319492 + (GAAA)n Simple_repeat Simple_repeat 4 129 0 9 1332 1062 31 47 0 chr13 97964840 97964969 -22319343 + B1_Mm SINE Alu 1 135 -12 9 1332 204 40 0 0 chr13 97964969 97964994 -22319318 + (G)n Simple_repeat Simple_repeat 1 25 0 9 1332 682 219 201 0 chr13 97964995 97965164 -22319148 + B3 SINE B2 5 207 -9 9 1332 596 199 88 0 chr13 97965183 97965319 -22318993 - B1_Mus1 SINE Alu 0 148 1 9 1332 23 33 0 0 chr13 97965326 97965356 -22318956 + AT_rich Low_complexity Low_complexity 1 30 0 9 1332 623 191 88 7 chr13 97965560 97965697 -22318615 + B1_Mur1 SINE Alu 2 149 0 9 1332 1143 15 7 0 chr13 97965966 97966102 -22318210 + B1_Mus1 SINE Alu 11 147 -1 9 1332 455 247 180 12 chr13 97967223 97967395 -22316917 + B3 SINE B2 16 216 0 9 1332 1260 34 0 0 chr13 97967619 97967765 -22316547 - B1_Mus2 SINE Alu 0 147 2 9 1332 988 186 30 30 chr13 97968846 97969045 -22315267 + B3 SINE B2 4 202 -14 9 1332 4330 86 7 2 chr13 97969045 97969626 -22314686 + MT2B2 LTR ERVL 1 584 0 9 1332 25 0 0 0 chr13 97969634 97969659 -22314653 + AT_rich Low_complexity Low_complexity 1 25 0 9 1332 247 235 0 38 chr13 97970039 97970092 -22314220 + RMER19C LTR ERVK 133 183 -428 9 1332 1659 11 0 11 chr13 97970262 97970451 -22313861 - B2_Mm1t SINE B2 -5 188 2 9 1332 1480 255 25 107 chr13 97970451 97970968 -22313344 - RMER19C LTR ERVK 0 611 137 9 1332 292 306 30 0 chr13 97971256 97971335 -22312977 - MLT1N2 LTR MaLR -75 494 406 9 1332 586 261 17 0 chr13 97971378 97971497 -22312815 + B1_Mur1 SINE Alu 2 122 -27 9 1332 797 296 112 29 chr13 97971524 97971980 -22312332 - MLT1N2-int LTR MaLR -155 1334 841 9 1332 656 257 85 24 chr13 97971987 97972198 -22312114 + Lx9 LINE L1 6582 6805 -839 9 1332 1349 230 55 32 chr13 97973058 97973404 -22310908 - ORR1D2 LTR MaLR -12 358 5 9 1332 2546 150 26 20 chr13 97973866 97974321 -22309991 + RMER6B LTR ERVK 4 461 0 9 1332 429 316 97 38 chr13 97974331 97974568 -22309744 + MER31B LTR ERV1 6 256 -210 9 1332 305 182 35 40 chr13 97974741 97974826 -22309486 + MER31B LTR ERV1 397 483 -2 9 1332 345 296 79 29 chr13 97974909 97975048 -22309264 - MLT1N2 LTR MaLR 0 562 417 9 1332 242 182 23 0 chr13 97975139 97975183 -22309129 - LTR33B LTR ERVL -384 119 75 9 1332 253 360 23 0 chr13 97975712 97975798 -22308514 + LTR89 LTR ERVL? 491 578 -301 9 1332 267 31 0 0 chr13 97976251 97976283 -22308029 + (TG)n Simple_repeat Simple_repeat 1 32 0 9 1332 658 252 19 57 chr13 97976400 97976610 -22307702 + MTC LTR MaLR 1 202 -219 9 1332 249 119 0 0 chr13 97976616 97976658 -22307654 + (GGGA)n Simple_repeat Simple_repeat 1 42 0 9 1332 224 250 14 0 chr13 97976658 97976709 -22307603 + GA-rich Low_complexity Low_complexity 2 53 0 9 1332 204 97 0 0 chr13 97976709 97976740 -22307572 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 9 1332 224 250 14 0 chr13 97976740 97976760 -22307552 + polypurine Low_complexity Low_complexity 54 73 0 9 1332 447 307 132 6 chr13 97976762 97976929 -22307383 + MTC LTR MaLR 232 419 0 9 1332 237 355 0 0 chr13 97976934 97976996 -22307316 + MTE2b LTR MaLR 22 83 -296 9 1332 1936 174 203 10 chr13 97977002 97977415 -22306897 + RMER5 LTR ERV1 42 534 0 9 1332 393 245 222 7 chr13 97977424 97977604 -22306708 + MTE2b LTR MaLR 60 267 -112 9 1332 350 277 74 77 chr13 97977611 97977908 -22306404 - RMER10A LTR ERVL -26 416 121 9 1332 1764 154 58 18 chr13 97978359 97978689 -22305623 + RMER10B LTR ERVL 56 398 0 9 1332 720 103 0 0 chr13 97978980 97979087 -22305225 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 9 1332 1141 95 0 0 chr13 97979091 97979238 -22305074 - B1_Mus1 SINE Alu 0 148 2 9 1332 1584 58 0 0 chr13 97979278 97979466 -22304846 + B2_Mm1a SINE B2 1 188 -5 9 1332 347 122 153 129 chr13 97979513 97979598 -22304714 - B4A SINE B4 0 292 206 9 1332 232 286 162 10 chr13 97979575 97979674 -22304638 - PB1D10 SINE Alu 0 117 4 9 1332 276 296 0 27 chr13 97979610 97979676 -22304636 - ID_B1 SINE B4 -76 148 84 9 1332 450 0 0 0 chr13 97979676 97979726 -22304586 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1332 594 266 81 52 chr13 97979728 97979938 -22304374 - B4A SINE B4 -68 224 9 9 1332 386 303 39 13 chr13 97980030 97980184 -22304128 - L1ME1 LINE L1 -236 5943 5786 9 1332 1889 200 109 30 chr13 97980222 97980736 -22303576 + RMER19B LTR ERVK 1 420 -482 9 1332 2563 154 85 21 chr13 97981292 97981763 -22302549 + RMER19B LTR ERVK 402 902 0 9 1332 481 304 50 119 chr13 97981910 97982272 -22302040 - MER44A DNA MER2_type -1 338 2 9 1332 254 318 62 23 chr13 97982657 97982786 -22301526 + L1M5 LINE L1 4863 4996 -1150 9 1332 229 159 68 0 chr13 97982950 97982994 -22301318 + B3 SINE B2 1 47 -169 9 1332 211 350 84 91 chr13 97983270 97983424 -22300888 + B3A SINE B2 1 153 -45 9 1332 657 267 97 25 chr13 97983288 97983484 -22300828 + ID_B1 SINE B4 15 224 0 9 1332 228 153 0 77 chr13 97983484 97983562 -22300750 + GA-rich Low_complexity Low_complexity 1 72 0 9 1332 225 237 51 0 chr13 97983684 97983743 -22300569 - MIR SINE MIR -92 170 109 9 1332 655 289 48 80 chr13 97983840 97984129 -22300183 + B4 SINE B4 1 280 -12 9 1332 277 157 45 0 chr13 97984138 97984227 -22300085 + (CAGA)n Simple_repeat Simple_repeat 4 96 0 9 1332 287 193 11 33 chr13 97984231 97984322 -22299990 + (CA)n Simple_repeat Simple_repeat 2 90 0 9 1332 324 256 238 8 chr13 97984771 97984897 -22299415 + LTR82B Low_complexity ERVL 111 265 -565 9 1332 273 57 0 0 chr13 97984900 97984935 -22299377 + (GGGGA)n Simple_repeat Simple_repeat 1 35 0 9 1332 309 317 122 39 chr13 97985263 97985493 -22298819 + LTR82B Low_complexity ERVL 547 795 -35 9 1332 203 61 30 0 chr13 97986793 97986826 -22297486 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1332 183 80 0 0 chr13 97986835 97986860 -22297452 + (TA)n Simple_repeat Simple_repeat 1 25 0 9 1332 628 271 11 48 chr13 97986999 97987185 -22297127 + B3A SINE B2 2 180 -18 9 1332 492 169 22 0 chr13 97987724 97987813 -22296499 - RSINE1 SINE B4 -72 93 3 9 1332 1440 78 16 10 chr13 97988288 97988481 -22295831 - B2_Mm2 SINE B2 0 195 2 9 1332 402 259 12 0 chr13 97988518 97988594 -22295718 - RSINE1 SINE B4 0 165 89 9 1332 802 163 97 111 chr13 97988594 97988729 -22295583 - RLTR25B LTR ERVK 0 1028 907 9 1332 279 0 0 0 chr13 97988729 97988760 -22295552 + (TC)n Simple_repeat Simple_repeat 2 32 0 9 1332 802 163 97 111 chr13 97988760 97988831 -22295481 - RLTR25B LTR ERVK -122 906 825 9 1332 745 96 178 31 chr13 97988853 97988982 -22295330 + B1_Mus1 SINE Alu 1 148 0 9 1332 28 0 0 0 chr13 97988984 97989012 -22295300 + AT_rich Low_complexity Low_complexity 1 28 0 9 1332 1244 183 113 53 chr13 97989147 97989447 -22294865 - RLTR25B LTR ERVK -175 853 536 9 1332 1422 107 33 0 chr13 97989447 97989662 -22294650 - Lx3A LINE L1 -416 6565 6344 9 1332 376 150 0 0 chr13 97989662 97989722 -22294590 - B2_Mm2 SINE B2 -41 154 95 9 1332 465 192 73 7 chr13 97989736 97989841 -22294471 - B1F SINE Alu 0 120 11 9 1332 238 282 103 88 chr13 97989857 97989993 -22294319 + B1F SINE Alu 6 143 -6 9 1332 2182 168 80 32 chr13 97990101 97990636 -22293676 + RLTR31_Mm LTR ERVK 1 561 0 9 1332 224 72 53 18 chr13 97990743 97990784 -22293528 + (TTTTTG)n Simple_repeat Simple_repeat 5 48 0 9 1332 1215 35 21 0 chr13 97990784 97990928 -22293384 - B1_Mus2 SINE Alu 0 147 1 9 1332 224 72 53 18 chr13 97990928 97990943 -22293369 + (TTTTTG)n Simple_repeat Simple_repeat 2 16 0 9 1332 524 283 68 14 chr13 97991189 97991336 -22292976 - ORR1D2 LTR MaLR -206 164 10 9 1332 351 0 0 0 chr13 97991338 97991377 -22292935 + (CA)n Simple_repeat Simple_repeat 1 39 0 9 1332 238 241 0 17 chr13 97991382 97991441 -22292871 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 9 1332 257 0 30 0 chr13 97991447 97991480 -22292832 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 9 1332 8096 36 1 1 chr13 97991482 97992422 -22291890 - L1Md_F2 LINE L1 -24 6558 5619 9 1332 596 14 14 0 chr13 97992436 97992509 -22291803 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 9 1332 640 346 21 21 chr13 97992513 97992847 -22291465 - LTR73 LTR ERV1 -193 379 46 9 1332 434 307 149 12 chr13 97993725 97993893 -22290419 - MER77 LTR ERVL -234 373 183 9 1332 672 245 7 0 chr13 97994582 97994725 -22289587 + ID_B1 SINE B4 3 146 -78 1 1332 230 128 43 0 chr13 97994836 97994883 -22289429 + GA-rich Low_complexity Low_complexity 1 49 0 1 1332 282 370 91 0 chr13 97995577 97995731 -22288581 + MIRc SINE MIR 50 217 -51 1 1332 306 215 49 37 chr13 97995887 97995969 -22288343 - RSINE1 SINE B4 -79 86 4 1 1332 23 0 0 0 chr13 97996040 97996063 -22288249 + AT_rich Low_complexity Low_complexity 1 23 0 1 1332 581 152 7 0 chr13 97996073 97996211 -22288101 + GA-rich Low_complexity Low_complexity 1 139 0 1 1332 375 198 93 9 chr13 97996360 97996467 -22287845 - Lx9 LINE L1 -8 7636 7521 1 1332 391 244 25 42 chr13 97997766 97997886 -22286426 + MER5A1 DNA MER1_type 17 134 -32 1 1332 1116 122 0 0 chr13 97998188 97998336 -22285976 - B1_Mus1 SINE Alu 0 148 1 1 1332 2119 177 103 68 chr13 97998363 97998385 -22285927 + RMER5 LTR ERV1 1 23 -511 1 1332 180 0 0 0 chr13 97998385 97998405 -22285907 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1 1332 2119 177 103 68 chr13 97998405 97998695 -22285617 + RMER5 LTR ERV1 24 342 -192 1 1332 306 0 0 0 chr13 97998695 97998729 -22285583 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1 1332 1261 28 0 0 chr13 97998729 97998874 -22285438 - B1_Mm SINE Alu -2 145 1 1 1332 2119 177 103 68 chr13 97998874 97999031 -22285281 + RMER5 LTR ERV1 343 483 -51 1 1332 378 0 0 0 chr13 97999031 97999073 -22285239 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 1 1332 2119 177 103 68 chr13 97999073 97999116 -22285196 + RMER5 LTR ERV1 484 531 -3 1 1332 820 231 11 6 chr13 97999444 97999618 -22284694 - B3 SINE B2 -5 211 37 1 1332 303 250 11 91 chr13 97999640 97999728 -22284584 + ID4 SINE ID 2 82 -1 1 1332 378 0 0 0 chr13 97999793 97999835 -22284477 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1332 180 176 0 0 chr13 97999835 97999869 -22284443 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1 1332 216 146 0 68 chr13 97999897 97999941 -22284371 - B2_Mm2 SINE B2 -150 45 5 1 1332 228 294 46 23 chr13 98000382 98000469 -22283843 + MamGypLTR2b LTR Gypsy 785 873 -49 1 1332 213 119 0 0 chr13 98000637 98000679 -22283633 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 2 1332 329 143 321 0 chr13 98000826 98000910 -22283402 + PB1D10 SINE Alu 1 111 -6 3 1332 861 284 14 80 chr13 98000921 98001196 -22283116 + B4A SINE B4 9 265 -27 4 1332 1249 94 0 11 chr13 98001196 98001353 -22282959 + B2_Mm2 SINE B2 1 157 -38 5 1332 333 0 0 0 chr13 98001353 98001390 -22282922 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 6 1332 1249 94 0 11 chr13 98001390 98001414 -22282898 + B2_Mm2 SINE B2 158 180 -15 5 1332 246 356 33 0 chr13 98001565 98001655 -22282657 - PB1D10 SINE Alu -12 105 13 7 1332 1665 36 0 0 chr13 98002804 98002996 -22281316 - B2_Mm1a SINE B2 0 193 2 8 1332 1033 126 0 0 chr13 98003004 98003147 -22281165 - B1_Mur3 SINE Alu -6 143 1 9 1332 825 284 15 0 chr13 98003159 98003363 -22280949 - B3 SINE B2 -4 212 6 1 1332 387 0 0 0 chr13 98004282 98004325 -22279987 + (TG)n Simple_repeat Simple_repeat 1 43 0 1 1332 304 79 0 60 chr13 98004325 98004392 -22279920 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 1 1332 1169 70 0 0 chr13 98004512 98004655 -22279657 + B1_Mus1 SINE Alu 5 147 -1 1 1332 180 0 0 0 chr13 98004661 98004681 -22279631 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1 1332 216 286 0 0 chr13 98005726 98005775 -22278537 + (CATA)n Simple_repeat Simple_repeat 3 51 0 1 1332 1225 99 47 0 chr13 98006428 98006600 -22277712 - B2_Mm2 SINE B2 -15 180 1 1 1332 213 359 39 0 chr13 98006836 98006914 -22277398 + ID4_ SINE ID 2 82 -1 1 1332 1324 259 28 83 chr13 98007139 98007482 -22276830 - MTEa LTR MaLR -5 374 53 1 1332 1215 70 13 169 chr13 98007482 98007707 -22276605 - B2_Mm1t SINE B2 -2 191 2 1 1332 1324 259 28 83 chr13 98007707 98007759 -22276553 - MTEa LTR MaLR -327 52 1 1 1332 244 301 12 24 chr13 98009876 98009961 -22274351 + MIR3 SINE MIR 96 179 -29 2 1332 411 21 0 0 chr13 98010059 98010107 -22274205 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 2 1332 294 29 0 0 chr13 98013844 98013879 -22270433 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1332 21 0 0 0 chr13 98014770 98014791 -22269521 + GC_rich Low_complexity Low_complexity 1 21 0 2 1332 265 312 82 64 chr13 98016921 98017092 -22267220 + MER5B DNA MER1_type 1 174 -4 2 1332 206 303 44 98 chr13 98017117 98017322 -22266990 - MIR SINE MIR -21 241 48 2 1332 1177 210 242 9 chr13 98017861 98018192 -22266120 - MTD LTR MaLR 0 419 12 2 1332 186 43 0 0 chr13 98021645 98021668 -22262644 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 2 1332 242 309 0 0 chr13 98023154 98023209 -22261103 + C-rich Low_complexity Low_complexity 2 56 0 2 1332 345 219 51 20 chr13 98023209 98023307 -22261005 - B1F2 SINE Alu -21 128 28 2 1332 1089 263 21 14 chr13 98024113 98024398 -22259914 - B4 SINE B4 -4 288 2 3 1332 203 228 35 17 chr13 98025189 98025247 -22259065 + MIR SINE MIR 204 262 0 3 1332 277 160 80 0 chr13 98025642 98025692 -22258620 + B4A SINE B4 1 54 -238 3 1332 459 295 21 7 chr13 98025707 98025847 -22258465 + B4A SINE B4 123 264 -28 3 1332 459 0 0 0 chr13 98025848 98025899 -22258413 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1332 625 279 106 41 chr13 98025901 98025960 -22258352 + MER89 LTR ERV1 216 279 -280 3 1332 352 37 18 18 chr13 98025960 98026015 -22258297 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 3 1332 625 279 106 41 chr13 98026015 98026247 -22258065 + MER89 LTR ERV1 280 525 -34 3 1332 1208 43 0 0 chr13 98027528 98027669 -22256643 + B1_Mm SINE Alu 1 141 -6 3 1332 1196 83 71 0 chr13 98027810 98027978 -22256334 + B2_Mm2 SINE B2 2 181 -14 3 1332 360 303 139 33 chr13 98028045 98028318 -22255994 + L1MC1 LINE L1 6026 6327 -6 3 1332 537 30 0 0 chr13 98028331 98028398 -22255914 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 4 1332 405 278 69 27 chr13 98028514 98028817 -22255495 + RMER17C LTR ERVK 1 374 -36 4 1332 637 287 117 41 chr13 98028854 98029170 -22255142 + MER21B LTR ERV1 1 340 -523 4 1332 250 274 75 0 chr13 98029193 98029280 -22255032 + BC1_Mm scRNA scRNA 1 98 -54 4 1332 1190 207 168 19 chr13 98029838 98029998 -22254314 + MTD LTR MaLR 44 235 -184 4 1332 396 0 0 0 chr13 98029998 98030042 -22254270 + (CAG)n Simple_repeat Simple_repeat 2 45 0 4 1332 1190 211 156 18 chr13 98030042 98030209 -22254103 + MTD LTR MaLR 236 404 -15 4 1332 264 243 12 86 chr13 98030619 98030700 -22253612 - ORR1E LTR MaLR -9 370 296 4 1332 284 219 88 125 chr13 98030704 98030840 -22253472 - RMER30 DNA MER1_type -51 151 21 4 1332 640 276 93 33 chr13 98030842 98031123 -22253189 - ORR1E LTR MaLR -85 285 1 4 1332 240 100 0 0 chr13 98031321 98031361 -22252951 + (CCCCCA)n Simple_repeat Simple_repeat 2 41 0 4 1332 189 74 0 0 chr13 98031579 98031606 -22252706 + (C)n Simple_repeat Simple_repeat 1 27 0 4 1332 2239 160 11 8 chr13 98031606 98031977 -22252335 + ORR1B1 LTR MaLR 23 394 0 5 1332 230 245 14 71 chr13 98031977 98032060 -22252252 - B1_Mus2 SINE Alu -48 69 1 5 1332 195 129 0 0 chr13 98032340 98032371 -22251941 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 5 1332 205 171 0 0 chr13 98032371 98032406 -22251906 + (TG)n Simple_repeat Simple_repeat 1 35 0 5 1332 447 292 107 66 chr13 98032412 98032683 -22251629 - B4A SINE B4 -6 286 5 5 1332 485 284 9 0 chr13 98033343 98033452 -22250860 - PB1D10 SINE Alu -1 116 7 5 1332 238 262 49 0 chr13 98033398 98033459 -22250853 - B4A SINE B4 -146 146 83 5 1332 328 246 527 36 chr13 98033653 98033842 -22250470 - B4 SINE B4 -10 282 1 5 1332 267 54 0 0 chr13 98034841 98034878 -22249434 + (TTTTG)n Simple_repeat Simple_repeat 3 39 0 5 1332 1220 84 0 6 chr13 98034958 98035138 -22249174 + (TTCTCC)n Simple_repeat Simple_repeat 1 179 0 5 1332 276 158 26 13 chr13 98035153 98035230 -22249082 + CT-rich Low_complexity Low_complexity 4 81 0 6 1332 395 266 42 130 chr13 98035251 98035335 -22248977 - B3A SINE B2 0 198 125 6 1332 2803 123 40 27 chr13 98035335 98035811 -22248501 - RLTR45 LTR ERVK 0 482 1 6 1332 395 266 42 130 chr13 98035811 98035942 -22248370 - B3A SINE B2 -74 124 2 6 1332 806 129 7 0 chr13 98035961 98036101 -22248211 + (TTTC)n Simple_repeat Simple_repeat 2 142 0 6 1332 1269 27 7 0 chr13 98036102 98036249 -22248063 - B1_Mus1 SINE Alu 0 148 1 6 1332 408 240 10 20 chr13 98036284 98036382 -22247930 + PB1D10 SINE Alu 20 116 -1 6 1332 267 298 85 0 chr13 98037223 98037317 -22246995 - MTEb LTR MaLR 0 379 278 6 1332 384 312 10 0 chr13 98037343 98037439 -22246873 - PB1D10 SINE Alu -9 108 12 6 1332 307 315 54 27 chr13 98037353 98037464 -22246848 - ID_B1 SINE B4 -45 179 66 6 1332 492 318 42 169 chr13 98037485 98037822 -22246490 + ORR1E LTR MaLR 64 357 -2 6 1332 2977 167 9 134 chr13 98038014 98038713 -22245599 - RMER19C LTR ERVK 0 611 1 7 1332 685 262 35 24 chr13 98038714 98038983 -22245329 + MTD LTR MaLR 6 303 -116 7 1332 2007 114 12 61 chr13 98039147 98039493 -22244819 + ORR1A4 LTR MaLR 1 329 0 7 1332 268 243 29 62 chr13 98039627 98039738 -22244574 + MTD LTR MaLR 267 419 0 7 1332 749 241 67 22 chr13 98039755 98039933 -22244379 + B3 SINE B2 23 208 -8 7 1332 312 232 0 0 chr13 98040006 98040062 -22244250 + ID4 SINE ID 1 56 -27 7 166 711 243 0 13 chr13 98041720 98041870 -22242442 + ORR1E LTR MaLR 1 148 -211 7 1333 402 236 39 4 chr13 98041977 98042090 -22242222 + MTE2a LTR MaLR 67 192 -229 7 1333 1488 245 27 22 chr13 98042090 98042457 -22241855 + ORR1D2 LTR MaLR 1 369 -1 7 1333 361 283 116 35 chr13 98042461 98042659 -22241653 + MTE2a LTR MaLR 192 405 -14 7 1333 201 74 0 0 chr13 98042713 98042740 -22241572 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 7 1333 21 71 0 0 chr13 98043025 98043067 -22241245 + AT_rich Low_complexity Low_complexity 1 42 0 7 1333 398 93 9 12 chr13 98043386 98043497 -22240815 - B2_Mm2 SINE B2 -1 194 47 8 1333 298 224 48 58 chr13 98043484 98043519 -22240793 + ORR1E LTR MaLR 244 274 -105 7 1333 1347 79 11 0 chr13 98043519 98043696 -22240616 - B2_Mm1t SINE B2 -14 179 1 8 1333 298 224 48 58 chr13 98043696 98043764 -22240548 + ORR1E LTR MaLR 275 346 -33 7 1333 1114 120 28 17 chr13 98044395 98044573 -22239739 + URR1A DNA MER1_type 47 226 0 8 1333 26 82 0 0 chr13 98044663 98044724 -22239588 + AT_rich Low_complexity Low_complexity 1 61 0 8 1333 415 302 81 108 chr13 98044840 98045137 -22239175 - LTR16A LTR ERVL -107 344 56 8 1333 180 308 0 0 chr13 98046589 98046641 -22237671 + L4 LINE RTE 239 290 -1739 8 1333 396 303 91 0 chr13 98047483 98047615 -22236697 + MER2 DNA MER2_type 26 169 -176 8 1333 468 0 0 0 chr13 98047984 98048036 -22236276 + (CA)n Simple_repeat Simple_repeat 2 53 0 8 1333 189 0 0 0 chr13 98048144 98048165 -22236147 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 8 1333 510 259 77 28 chr13 98048170 98048313 -22235999 - RSINE1 SINE B4 -12 153 4 8 1333 322 354 76 0 chr13 98048313 98048471 -22235841 + MER2 DNA MER2_type 176 345 0 8 1333 273 220 34 0 chr13 98048644 98048703 -22235609 - MARNA DNA Mariner -383 203 143 9 1333 746 254 34 0 chr13 98048793 98048998 -22235314 + B3 SINE B2 2 213 -3 9 1333 591 53 0 0 chr13 98049063 98049138 -22235174 + (TTCC)n Simple_repeat Simple_repeat 1 75 0 9 1333 439 267 80 15 chr13 98049342 98049479 -22234833 + B1F2 SINE Alu 1 146 -3 9 1333 1114 68 0 52 chr13 98049639 98049794 -22234518 - B1_Mus1 SINE Alu 0 148 2 9 1333 604 153 98 9 chr13 98049794 98049898 -22234414 - B1_Mur1 SINE Alu -12 137 23 9 1333 455 104 0 13 chr13 98050439 98050450 -22233862 + (GAAA)n Simple_repeat Simple_repeat 2 12 0 9 1333 531 233 26 0 chr13 98050450 98050566 -22233746 + PB1D9 SINE Alu 2 120 0 9 1333 455 104 0 13 chr13 98050566 98050632 -22233680 + (GAAA)n Simple_repeat Simple_repeat 1 65 0 9 1333 23 0 0 0 chr13 98050700 98050723 -22233589 + AT_rich Low_complexity Low_complexity 1 23 0 9 1333 218 106 21 0 chr13 98050835 98050882 -22233430 + (TTTTG)n Simple_repeat Simple_repeat 1 48 0 1 1333 813 114 91 0 chr13 98050882 98051014 -22233298 - B1_Mm SINE Alu 0 147 4 1 1333 283 299 110 92 chr13 98051071 98051244 -22233068 - MTEa LTR MaLR 0 379 204 1 1333 366 329 54 54 chr13 98052166 98052434 -22231878 + L2a LINE L2 3097 3426 0 1 1333 552 165 0 0 chr13 98052551 98052666 -22231646 + (CA)n Simple_repeat Simple_repeat 1 115 0 1 1333 360 0 0 0 chr13 98053261 98053301 -22231011 + (TC)n Simple_repeat Simple_repeat 2 41 0 1 1333 214 312 0 12 chr13 98053440 98053521 -22230791 + A-rich Low_complexity Low_complexity 3 82 0 1 1333 928 221 20 26 chr13 98053849 98054044 -22230268 - RMER30 DNA MER1_type -1 201 8 1 1333 339 289 172 0 chr13 98054408 98054536 -22229776 + RSINE1 SINE B4 4 153 -12 1 1333 395 38 0 19 chr13 98054542 98054596 -22229716 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1333 1008 220 5 9 chr13 98054883 98055099 -22229213 - B3 SINE B2 0 216 2 1 1333 859 186 49 44 chr13 98056084 98056309 -22228003 + Lx7 LINE L1 7471 7696 0 1 1333 597 183 158 0 chr13 98056375 98056495 -22227817 + B1_Mur3 SINE Alu 6 144 -5 1 1333 387 0 0 0 chr13 98057105 98057148 -22227164 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1333 341 75 19 0 chr13 98057206 98057259 -22227053 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1333 896 289 38 13 chr13 98057280 98057518 -22226794 - B4A SINE B4 -41 251 8 1 1333 249 108 0 0 chr13 98057579 98057616 -22226696 + (CAT)n Simple_repeat Simple_repeat 1 37 0 1 1333 1257 40 0 0 chr13 98058243 98058391 -22225921 - B1_Mus1 SINE Alu 0 148 1 1 1333 480 276 228 38 chr13 98058691 98058928 -22225384 + B4 SINE B4 11 292 0 1 1333 237 218 0 0 chr13 98058931 98059009 -22225303 + (CA)n Simple_repeat Simple_repeat 2 79 0 1 1333 708 242 0 7 chr13 98059384 98059534 -22224778 - B1_Mur4 SINE Alu 0 150 2 1 1333 308 310 88 20 chr13 98060009 98060111 -22224201 - ID_B1 SINE B4 -17 207 99 1 1333 22 0 0 0 chr13 98060288 98060310 -22224002 + AT_rich Low_complexity Low_complexity 1 22 0 1 1333 504 301 7 34 chr13 98060583 98060731 -22223581 - RSINE1 SINE B4 -19 146 3 1 1333 265 274 71 88 chr13 98060862 98061306 -22223006 + RMER17C LTR ERVK 1 362 -48 1 1333 483 145 0 0 chr13 98061651 98061734 -22222578 + (CGTG)n Simple_repeat Simple_repeat 1 83 0 1 1333 279 79 0 0 chr13 98061969 98062007 -22222305 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1333 420 20 0 0 chr13 98062014 98062063 -22222249 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1333 211 211 0 0 chr13 98062070 98062108 -22222204 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 1 1333 441 0 0 0 chr13 98062810 98062859 -22221453 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1333 1129 76 139 12 chr13 98063568 98063741 -22220571 + B2_Mm2 SINE B2 1 195 0 1 1333 792 296 42 83 chr13 98064061 98064374 -22219938 + MER2 DNA MER2_type 1 300 -45 1 1333 1220 68 0 0 chr13 98064746 98064894 -22219418 - B1_Mus1 SINE Alu 0 148 1 1 1333 267 152 0 0 chr13 98065334 98065380 -22218932 + GA-rich Low_complexity Low_complexity 4 49 0 1 1333 562 119 10 19 chr13 98066102 98066205 -22218107 + (TCTCCC)n Simple_repeat Simple_repeat 2 103 0 1 1333 1410 80 11 0 chr13 98066541 98066729 -22217583 + B2_Mm1t SINE B2 2 191 -2 1 1333 1077 274 123 29 chr13 98066889 98067272 -22217040 + MTD LTR MaLR 1 419 0 1 1333 309 320 53 71 chr13 98067281 98067665 -22216647 - LTR48B LTR ERV1 -220 424 1 1 1333 476 274 0 0 chr13 98067749 98067855 -22216457 - PB1D10 SINE Alu -8 109 4 1 1333 504 273 91 0 chr13 98068251 98068427 -22215885 + L1MC1 LINE L1 6140 6331 -2 1 1333 506 224 0 227 chr13 98068444 98068721 -22215591 + B3 SINE B2 1 214 -2 1 1333 791 166 20 14 chr13 98069054 98069201 -22215111 - B1_Mur1 SINE Alu 0 149 2 1 1333 1128 147 11 0 chr13 98069330 98069507 -22214805 + B2_Mm1t SINE B2 1 179 -14 1 1333 337 137 9 17 chr13 98069536 98069648 -22214664 + B2_Mm2 SINE B2 46 194 -1 1 1333 22 35 0 0 chr13 98069648 98069677 -22214635 + AT_rich Low_complexity Low_complexity 1 29 0 1 1333 269 265 10 48 chr13 98070195 98070298 -22214014 + L3 LINE CR1 4390 4488 -1 1 1333 240 264 71 62 chr13 98071418 98071531 -22212781 - MamRep4096 DNA hAT? -11 415 302 1 1333 557 161 37 20 chr13 98071537 98071833 -22212479 + (CA)n Simple_repeat Simple_repeat 1 301 0 1 1333 294 95 0 0 chr13 98072238 98072280 -22212032 + (TGG)n Simple_repeat Simple_repeat 1 42 0 1 1333 222 271 34 0 chr13 98072280 98072339 -22211973 - ID4 SINE ID -21 62 2 1 1333 355 375 105 38 chr13 98072447 98072713 -22211599 + ORR1E LTR MaLR 68 351 -8 1 1333 4318 140 97 79 chr13 98073064 98073950 -22210362 - RMER19B LTR ERVK 0 902 1 1 1333 257 227 218 40 chr13 98074702 98074803 -22209509 - PB1 SINE Alu 0 127 9 1 1333 863 227 24 62 chr13 98074965 98075176 -22209136 + Lx8 LINE L1 6944 7146 -327 1 1333 300 234 179 28 chr13 98075179 98075324 -22208988 + Lx8 LINE L1 7305 7471 -2 1 1333 212 299 66 72 chr13 98075787 98075953 -22208359 + MIR SINE MIR 94 258 -4 1 1333 190 0 67 0 chr13 98076131 98076161 -22208151 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1 1333 1058 66 58 0 chr13 98076161 98076298 -22208014 - B1_Mus2 SINE Alu -2 145 1 1 1333 252 214 0 0 chr13 98076299 98076355 -22207957 + (CAT)n Simple_repeat Simple_repeat 2 57 0 1 1333 305 277 0 24 chr13 98076873 98076958 -22207354 - RSINE1 SINE B4 -82 83 1 1 1333 225 309 0 14 chr13 98077416 98077485 -22206827 + MER97c DNA MER1_type? 566 633 -457 1 1333 348 285 132 17 chr13 98077555 98077806 -22206506 + MER97b DNA MER1_type? 811 1087 -3 1 1333 321 356 73 105 chr13 98077924 98078294 -22206018 - ORR1E LTR MaLR -1 358 1 1 1333 23 0 0 0 chr13 98078796 98078819 -22205493 + AT_rich Low_complexity Low_complexity 1 23 0 1 1333 659 273 59 25 chr13 98078831 98079034 -22205278 + ORR1D2 LTR MaLR 151 360 -10 1 1333 688 251 98 0 chr13 98079044 98079227 -22205085 - B4 SINE B4 -86 206 6 1 1333 560 243 41 41 chr13 98079389 98079535 -22204777 - B1F SINE Alu -1 148 3 1 1333 232 365 17 42 chr13 98079835 98079955 -22204357 - PB1D10 SINE Alu 0 117 1 1 1333 216 0 0 0 chr13 98080496 98080520 -22203792 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1333 500 89 28 47 chr13 98081748 98081854 -22202458 + C-rich Low_complexity Low_complexity 2 105 0 1 1333 1935 89 74 14 chr13 98081880 98082176 -22202136 - ORR1A4 LTR MaLR -8 321 8 1 1333 554 238 159 4 chr13 98082200 98082426 -22201886 - B4A SINE B4 -21 271 11 1 1333 283 348 78 30 chr13 98082795 98082961 -22201351 + MIRc SINE MIR 30 203 -65 1 1333 361 252 53 18 chr13 98083010 98083123 -22201189 - PB1D10 SINE Alu 0 117 1 1 1333 2028 109 38 16 chr13 98084044 98084360 -22199952 - ORR1A2 LTR MaLR 0 327 5 1 1333 289 190 25 12 chr13 98086693 98086738 -22197574 + (CATA)n Simple_repeat Simple_repeat 4 48 0 1 1333 1053 150 0 0 chr13 98086738 98086918 -22197394 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1333 994 165 10 5 chr13 98086918 98087216 -22197096 + (CATA)n Simple_repeat Simple_repeat 1 299 0 1 1333 612 250 17 0 chr13 98088606 98088722 -22195590 - ID_B1 SINE B4 -21 203 86 1 1333 314 277 91 16 chr13 98088715 98088836 -22195476 + B1F1 SINE Alu 18 147 -2 1 1333 736 273 19 67 chr13 98088841 98089049 -22195263 + B3A SINE B2 1 198 0 1 1333 192 77 0 0 chr13 98089105 98089131 -22195181 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1333 378 0 0 0 chr13 98089288 98089330 -22194982 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1333 1402 155 48 84 chr13 98090300 98090610 -22193702 - ORR1C1 LTR MaLR -79 299 1 1 1333 202 258 0 0 chr13 98090703 98090765 -22193547 + C-rich Low_complexity Low_complexity 1 62 0 1 1333 465 263 291 0 chr13 98090919 98091170 -22193142 + RMER15 LTR ERVL 239 562 -13 1 1333 3037 85 25 93 chr13 98091302 98091818 -22192494 + RLTR45 LTR ERVK 1 481 -1 1 1333 651 26 0 0 chr13 98091855 98091932 -22192380 + (TCCC)n Simple_repeat Simple_repeat 2 78 0 1 1333 729 0 0 0 chr13 98091932 98092013 -22192299 + (TTTC)n Simple_repeat Simple_repeat 2 82 0 1 1333 1173 50 0 0 chr13 98092013 98092152 -22192160 - B1_Mus1 SINE Alu -9 139 1 1 1333 521 300 72 64 chr13 98092417 98092652 -22191660 + ORR1E LTR MaLR 1 237 -122 1 1333 940 247 52 60 chr13 98093791 98094124 -22190188 + L1MB3 LINE L1 5700 6026 -265 1 1333 473 245 7 0 chr13 98094993 98095132 -22189180 + (TA)n Simple_repeat Simple_repeat 2 141 0 1 1333 21 36 0 0 chr13 98095417 98095445 -22188867 + AT_rich Low_complexity Low_complexity 1 28 0 1 1333 1872 175 39 0 chr13 98096249 98096609 -22187703 - ORR1D1 LTR MaLR 0 374 1 1 1333 258 318 47 0 chr13 98096759 98096844 -22187468 + MIRb SINE MIR 15 103 -165 1 1333 1072 206 56 73 chr13 98096890 98097246 -22187066 + RMER17C LTR ERVK 2 351 -59 1 1333 452 355 0 12 chr13 98097702 98097870 -22186442 + C-rich Low_complexity Low_complexity 5 170 0 1 1333 273 293 31 42 chr13 98098395 98098491 -22185821 + L2b LINE L2 3276 3370 -5 1 1333 813 155 40 7 chr13 98099399 98099548 -22184764 + URR1B DNA MER1_type 67 220 -5 1 1333 315 0 0 0 chr13 98100142 98100177 -22184135 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1333 1106 257 76 0 chr13 98100393 98100669 -22183643 + RMER1B Other Other 65 361 -705 1 1333 4244 162 62 54 chr13 98100687 98101583 -22182729 + RMER13B LTR ERVK 1 904 -4 2 1333 3805 179 36 160 chr13 98101588 98102630 -22181682 + RMER1B Other Other 154 1066 0 2 1333 538 191 73 0 chr13 98102647 98102757 -22181555 + B3 SINE B2 1 118 -98 2 1333 233 347 57 57 chr13 98103179 98103338 -22180974 - L2 LINE L2 -467 2952 2794 2 1333 765 272 21 7 chr13 98103341 98103530 -22180782 + B3 SINE B2 2 186 -9 2 1333 204 67 0 0 chr13 98103718 98103748 -22180564 + (G)n Simple_repeat Simple_repeat 1 30 0 2 1333 231 237 0 0 chr13 98104847 98104885 -22179427 - B1_Mur4 SINE Alu -107 43 6 2 1333 561 316 6 0 chr13 98104952 98105110 -22179202 - RSINE1 SINE B4 -2 163 5 2 1333 408 212 0 22 chr13 98105517 98105652 -22178660 + GA-rich Low_complexity Low_complexity 3 134 0 2 1333 324 292 11 22 chr13 98105901 98105992 -22178320 + ID_B1 SINE B4 1 90 -134 2 1333 745 200 0 51 chr13 98105969 98106127 -22178185 - ORR1B1 LTR MaLR -204 190 41 2 1333 543 275 8 0 chr13 98106130 98106250 -22178062 + ID_B1 SINE B4 99 219 -5 2 1333 362 301 21 0 chr13 98106953 98107046 -22177266 + PB1 SINE Alu 13 107 -20 2 1333 288 0 0 0 chr13 98108063 98108095 -22176217 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1333 285 51 0 0 chr13 98108318 98108357 -22175955 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 2 1333 807 218 67 0 chr13 98108369 98108534 -22175778 - ID_B1 SINE B4 -48 176 1 2 1333 1346 230 147 22 chr13 98109195 98109555 -22174757 + MTD LTR MaLR 1 405 -14 2 1333 417 296 122 37 chr13 98109626 98109840 -22174472 - ORR1E LTR MaLR -121 238 7 2 1333 519 297 43 0 chr13 98110894 98111032 -22173280 + B1_Mur2 SINE Alu 4 147 -2 2 1333 262 302 119 46 chr13 98113169 98113429 -22170883 - L1MEb LINE L1 -4561 1539 1248 2 1333 1005 123 0 7 chr13 98113474 98113621 -22170691 - B1_Mur2 SINE Alu -1 148 3 2 1333 660 87 0 0 chr13 98113860 98113952 -22170360 + (TCCC)n Simple_repeat Simple_repeat 4 95 0 2 1333 259 270 0 16 chr13 98113954 98114018 -22170294 - PB1D10 SINE Alu -14 103 41 2 1333 401 271 91 83 chr13 98114030 98114283 -22170029 - L1MEb LINE L1 -5186 884 630 2 1333 22 35 0 0 chr13 98114799 98114828 -22169484 + AT_rich Low_complexity Low_complexity 1 29 0 2 1333 2419 97 16 0 chr13 98116336 98116657 -22167655 - ORR1A2 LTR MaLR -1 326 1 2 1333 230 0 33 0 chr13 98116714 98116744 -22167568 + (TGG)n Simple_repeat Simple_repeat 3 33 0 2 1333 486 305 33 76 chr13 98116806 98117112 -22167200 - MTEb LTR MaLR -3 376 59 2 1333 1020 264 91 68 chr13 98118181 98118233 -22166079 - MT2A LTR ERVL 0 533 484 2 1333 487 15 14 29 chr13 98118233 98118302 -22166010 + (TCTA)n Simple_repeat Simple_repeat 4 71 0 2 1333 1020 264 91 68 chr13 98118302 98118461 -22165851 - MT2A LTR ERVL -50 483 298 2 1333 929 168 184 0 chr13 98118461 98118651 -22165661 + URR1B DNA MER1_type 1 225 0 2 1333 1020 245 60 57 chr13 98118651 98119025 -22165287 - MT2A LTR ERVL -236 297 1 2 1333 595 286 70 52 chr13 98119175 98119496 -22164816 + MLT1A1 LTR MaLR 53 408 0 2 1333 933 248 5 0 chr13 98119842 98120056 -22164256 - ID_B1 SINE B4 -8 216 2 2 1333 224 255 0 0 chr13 98120285 98120336 -22163976 + T-rich Low_complexity Low_complexity 1 51 0 2 1333 189 0 0 0 chr13 98121491 98121512 -22162800 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1333 308 311 136 0 chr13 98123566 98123698 -22160614 + MIR SINE MIR 107 256 -6 2 1333 4225 130 61 8 chr13 98125027 98125684 -22158628 - RLTR17 LTR ERVK 0 692 1 2 1333 238 250 237 10 chr13 98125764 98125861 -22158451 - MIRc SINE MIR -124 144 26 2 1333 374 336 27 20 chr13 98126594 98126740 -22157572 + MIRb SINE MIR 117 263 -5 2 1333 806 281 75 0 chr13 98126798 98126997 -22157315 + B4 SINE B4 1 214 -78 2 1333 261 139 0 0 chr13 98127247 98127290 -22157022 + (TTA)n Simple_repeat Simple_repeat 1 43 0 2 1333 327 233 14 0 chr13 98127290 98127363 -22156949 - ID4 SINE ID -5 78 5 2 1333 210 204 0 36 chr13 98128774 98128830 -22155482 + G-rich Low_complexity Low_complexity 5 58 0 2 1333 226 115 0 37 chr13 98128943 98128997 -22155315 + (CAA)n Simple_repeat Simple_repeat 3 54 0 2 1333 210 261 65 0 chr13 98129877 98129923 -22154389 + ID4 SINE ID 4 52 -31 2 1333 284 362 22 73 chr13 98129968 98130105 -22154207 - MARNA DNA Mariner -189 397 268 2 1333 726 222 30 0 chr13 98130156 98130291 -22154021 + B3A SINE B2 1 139 -59 2 1333 642 261 19 25 chr13 98130583 98130744 -22153568 - RSINE1 SINE B4 0 165 6 2 1333 1258 35 0 0 chr13 98131732 98131876 -22152436 - B1_Mus2 SINE Alu -1 146 3 2 1333 504 282 11 73 chr13 98131978 98132169 -22152143 - B3A SINE B2 -18 180 2 2 1333 448 266 92 0 chr13 98132610 98132719 -22151593 - RSINE1 SINE B4 -2 163 45 2 1333 1263 168 27 0 chr13 98132952 98133172 -22151140 + URR1A DNA MER1_type 1 226 0 2 1333 215 116 0 104 chr13 98133853 98133901 -22150411 + L2a LINE L2 3384 3426 0 2 1333 443 326 125 17 chr13 98134505 98134745 -22149567 + LTR82B Low_complexity ERVL 344 609 -221 2 1333 208 296 0 0 chr13 98136691 98136745 -22147567 + MIRb SINE MIR 209 262 -6 2 1333 393 149 0 0 chr13 98137720 98137787 -22146525 + (CCTG)n Simple_repeat Simple_repeat 1 67 0 2 1333 1080 212 162 184 chr13 98137810 98138284 -22146028 - MT2A LTR ERVL -69 464 1 2 1333 22 0 0 0 chr13 98138432 98138454 -22145858 + AT_rich Low_complexity Low_complexity 1 22 0 2 1333 259 327 148 0 chr13 98138530 98138631 -22145681 + MER45C DNA Tip100 2 117 -836 2 1333 189 0 0 0 chr13 98138872 98138893 -22145419 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1333 481 185 40 6 chr13 98139065 98139239 -22145073 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1333 345 125 0 0 chr13 98139586 98139642 -22144670 + (TCCA)n Simple_repeat Simple_repeat 4 59 0 2 1333 477 231 54 36 chr13 98139642 98139754 -22144558 - B1_Mur1 SINE Alu -7 142 29 2 1333 639 289 0 72 chr13 98140195 98140389 -22143923 + B3A SINE B2 5 184 -14 2 1333 330 284 72 18 chr13 98140409 98140520 -22143792 + PB1D10 SINE Alu 1 117 0 2 1333 2167 210 166 103 chr13 98140636 98141433 -22142879 - RMER13A LTR ERVK -13 847 1 2 1333 1197 118 27 5 chr13 98141766 98141953 -22142359 + B2_Mm2 SINE B2 1 191 -4 2 1333 228 43 43 21 chr13 98142019 98142066 -22142246 + (CAAAA)n Simple_repeat Simple_repeat 4 51 0 2 1333 522 0 0 0 chr13 98142260 98142318 -22141994 + (GA)n Simple_repeat Simple_repeat 1 58 0 2 1333 252 0 0 0 chr13 98142554 98142582 -22141730 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1333 180 0 0 0 chr13 98142706 98142726 -22141586 + (C)n Simple_repeat Simple_repeat 1 20 0 2 1333 616 226 53 0 chr13 98143250 98143383 -22140929 - B1F SINE Alu -9 140 1 2 1333 184 238 91 45 chr13 98144150 98144216 -22140096 + L3 LINE CR1 73 141 -4348 2 1333 288 0 0 0 chr13 98144380 98144412 -22139900 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1333 441 0 0 0 chr13 98144442 98144491 -22139821 + (TC)n Simple_repeat Simple_repeat 2 50 0 2 1333 1572 11 34 0 chr13 98144491 98144669 -22139643 - B2_Mm1a SINE B2 -9 184 1 2 1333 207 0 0 0 chr13 98144805 98144828 -22139484 + (T)n Simple_repeat Simple_repeat 1 23 0 2 1333 1133 89 0 0 chr13 98144828 98144974 -22139338 - B1_Mm SINE Alu 0 147 2 2 1333 246 62 0 0 chr13 98145145 98145177 -22139135 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1333 331 340 0 0 chr13 98145197 98145303 -22139009 + (TG)n Simple_repeat Simple_repeat 1 106 0 2 1333 591 15 0 0 chr13 98145322 98145390 -22138922 + (CA)n Simple_repeat Simple_repeat 2 69 0 2 1333 238 240 13 26 chr13 98146353 98146430 -22137882 + (TG)n Simple_repeat Simple_repeat 1 76 0 2 1333 416 318 194 23 chr13 98148006 98148264 -22136048 - MLT1A0 LTR MaLR -1 364 63 2 1333 219 69 0 0 chr13 98148601 98148630 -22135682 + (CCCCCA)n Simple_repeat Simple_repeat 1 29 0 2 1333 1964 222 37 50 chr13 98148631 98148719 -22135593 + MT2A LTR ERVL 4 89 -444 2 1333 1489 77 0 5 chr13 98148719 98148915 -22135397 - B2_Mm2 SINE B2 0 195 1 2 1333 1964 222 37 50 chr13 98148915 98149291 -22135021 + MT2A LTR ERVL 90 462 -71 2 1333 239 71 24 0 chr13 98149321 98149363 -22134949 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 1333 1134 278 75 18 chr13 98149411 98149744 -22134568 + ORR1D2 LTR MaLR 1 352 -18 2 1333 309 339 17 9 chr13 98149758 98149874 -22134438 - PB1D10 SINE Alu 0 117 1 2 1333 249 289 0 50 chr13 98149874 98149942 -22134370 - MamGypLTR2c LTR Gypsy -974 94 31 2 1333 208 167 28 0 chr13 98150799 98150835 -22133477 + L2b LINE L2 3327 3363 -12 2 1333 1095 147 100 29 chr13 98151262 98151472 -22132840 + URR1B DNA MER1_type 1 225 0 2 1333 212 259 37 0 chr13 98151822 98151876 -22132436 - L2c LINE L2 -52 3335 3280 2 1333 602 199 58 58 chr13 98152176 98152331 -22131981 + RMER15 LTR ERVL 29 183 -392 2 1333 1750 207 110 3 chr13 98152340 98152713 -22131599 + MTD LTR MaLR 1 413 -6 2 1333 264 221 59 0 chr13 98152769 98152837 -22131475 + MLT1K LTR MaLR 444 515 -80 2 1333 632 202 9 0 chr13 98152906 98153020 -22131292 + B1_Mus2 SINE Alu 4 118 -29 2 1333 239 226 11 116 chr13 98152942 98153037 -22131275 + RLTR25B LTR ERVK 442 526 -502 2 1333 214 277 40 25 chr13 98153036 98153116 -22131196 - B1F2 SINE Alu -63 86 6 2 1333 192 152 0 0 chr13 98153929 98153962 -22130350 + A-rich Low_complexity Low_complexity 2 34 0 2 1333 567 43 0 0 chr13 98154699 98154769 -22129543 + (TC)n Simple_repeat Simple_repeat 2 71 0 2 1333 566 261 15 15 chr13 98154783 98154919 -22129393 - RSINE1 SINE B4 -28 137 2 2 1333 526 300 28 7 chr13 98155038 98155179 -22129133 - B1F1 SINE Alu -5 144 1 2 1333 266 108 45 15 chr13 98155768 98155834 -22128478 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 1333 307 98 16 16 chr13 98156169 98156231 -22128081 + (GA)n Simple_repeat Simple_repeat 2 63 0 3 1333 28 29 0 0 chr13 98156306 98156341 -22127971 + AT_rich Low_complexity Low_complexity 1 35 0 3 1333 1050 206 16 21 chr13 98156541 98156734 -22127578 + URR1A DNA MER1_type 3 194 -32 3 1333 261 316 0 0 chr13 98157128 98157207 -22127105 - ID4_ SINE ID -3 80 2 3 1333 594 239 157 37 chr13 98157287 98157478 -22126834 + B3 SINE B2 1 214 -2 3 1333 190 276 80 20 chr13 98157644 98157744 -22126568 - MER5B DNA MER1_type -1 177 72 3 1333 548 289 12 36 chr13 98158430 98158595 -22125717 - RSINE1 SINE B4 -2 163 3 3 1333 1589 47 0 16 chr13 98160002 98160196 -22124116 + B2_Mm1a SINE B2 1 191 -2 3 1333 23 0 0 0 chr13 98160204 98160227 -22124085 + AT_rich Low_complexity Low_complexity 1 23 0 3 1333 378 0 0 0 chr13 98160904 98160946 -22123366 + (TC)n Simple_repeat Simple_repeat 2 43 0 3 1333 866 218 43 14 chr13 98161124 98161333 -22122979 - B3 SINE B2 0 216 2 3 1333 435 119 0 0 chr13 98161518 98161585 -22122727 + (TA)n Simple_repeat Simple_repeat 2 68 0 3 1333 384 22 0 0 chr13 98162262 98162307 -22122005 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 3 1333 707 174 5 11 chr13 98162358 98162508 -22121804 - ORR1B1 LTR MaLR -87 307 130 3 1333 411 202 12 12 chr13 98162464 98162544 -22121768 - B1_Mur3 SINE Alu -59 90 11 3 1333 622 258 8 0 chr13 98162588 98162716 -22121596 + RSINE1 SINE B4 2 130 -35 3 1333 498 119 0 0 chr13 98162729 98162813 -22121499 + (CA)n Simple_repeat Simple_repeat 1 84 0 3 1333 997 234 59 23 chr13 98163361 98163686 -22120626 + ORR1D1 LTR MaLR 1 359 0 3 1333 551 234 16 173 chr13 98165764 98165825 -22118487 + RSINE1 SINE B4 5 49 -116 3 1333 915 243 24 5 chr13 98165825 98166036 -22118276 - B3 SINE B2 -1 215 1 3 1333 551 234 16 173 chr13 98166036 98166165 -22118147 + RSINE1 SINE B4 50 165 0 3 1333 2318 97 3 0 chr13 98166307 98166626 -22117686 + ORR1A2 LTR MaLR 8 327 0 3 1333 618 246 197 26 chr13 98166634 98166868 -22117444 - B4A SINE B4 -18 274 1 3 1333 437 339 26 74 chr13 98167711 98168023 -22116289 - LTR16A LTR ERVL -15 436 140 3 1333 3044 105 2 29 chr13 98168062 98168504 -22115808 + RLTR23 LTR ERV1 1 430 0 3 1333 198 289 87 22 chr13 98168551 98168643 -22115669 - MIRc SINE MIR -97 171 74 3 1333 1616 196 56 9 chr13 98168786 98169126 -22115186 + MTD LTR MaLR 13 368 -51 3 1333 640 93 37 0 chr13 98169240 98169348 -22114964 + (TATG)n Simple_repeat Simple_repeat 4 115 0 3 1333 259 280 184 0 chr13 98169818 98169943 -22114369 - B1F SINE Alu -1 148 1 3 1333 275 313 72 66 chr13 98169943 98170261 -22114051 + MLT2C2 LTR ERVL 80 399 -65 3 1333 204 40 0 0 chr13 98170290 98170315 -22113997 + (TTG)n Simple_repeat Simple_repeat 3 27 0 3 1333 311 234 39 13 chr13 98170319 98170397 -22113915 - BC1_Mm scRNA scRNA -71 81 2 3 1333 557 28 14 0 chr13 98170415 98170486 -22113826 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 1333 570 54 0 0 chr13 98170516 98170590 -22113722 + (CA)n Simple_repeat Simple_repeat 2 75 0 3 1333 253 331 67 33 chr13 98170712 98170862 -22113450 + LTR82B Low_complexity ERVL 227 381 -449 3 1333 484 284 124 18 chr13 98171677 98171950 -22112362 - MLT1B LTR MaLR -7 383 82 3 1334 190 311 124 16 chr13 98173212 98173333 -22110979 - L2a LINE L2 0 3426 3293 3 1334 430 281 93 0 chr13 98173371 98173510 -22110802 - MER91B DNA Tip100 -1 189 38 3 1334 2296 204 38 14 chr13 98173548 98174054 -22110258 - RLTR20A LTR ERVK -23 518 1 3 1334 297 395 40 6 chr13 98174077 98174250 -22110062 - L2a LINE L2 -280 3146 2968 3 1334 584 272 123 13 chr13 98174466 98174724 -22109588 + L1MA5 LINE L1 5662 5945 -355 3 1334 297 0 0 0 chr13 98174724 98174757 -22109555 + (TCTA)n Simple_repeat Simple_repeat 1 33 0 3 1334 584 255 252 35 chr13 98174757 98174966 -22109346 + L1MA5 LINE L1 5946 6231 -69 3 1334 2829 141 126 15 chr13 98175000 98175518 -22108794 - RMER15 LTR ERVL 0 575 1 3 1334 205 146 42 0 chr13 98175633 98175681 -22108631 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 3 1334 1010 30 0 29 chr13 98175789 98175926 -22108386 - B1_Mus1 SINE Alu 0 148 16 3 1334 329 311 37 28 chr13 98175971 98176080 -22108232 + PB1D10 SINE Alu 1 110 -7 3 1334 297 135 0 0 chr13 98176684 98176736 -22107576 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1334 491 275 34 86 chr13 98176881 98177056 -22107256 - B4A SINE B4 -126 166 1 3 1334 534 257 14 75 chr13 98177848 98177995 -22106317 + RSINE1 SINE B4 15 152 -13 3 1334 221 314 41 16 chr13 98180729 98180852 -22103460 - MIR3 SINE MIR -16 192 67 3 1334 656 318 118 45 chr13 98181167 98181589 -22102723 - MLT2B1 LTR ERVL -17 503 51 3 1334 308 282 13 0 chr13 98182444 98182522 -22101790 - Charlie18a DNA MER1_type 0 342 264 3 1334 315 264 0 0 chr13 98182996 98183068 -22101244 + RSINE1 SINE B4 2 73 -92 3 1334 442 236 97 17 chr13 98183235 98183413 -22100899 + B3 SINE B2 4 194 -1 3 1334 258 231 63 59 chr13 98184325 98184455 -22099857 + MIRc SINE MIR 13 147 -121 3 1334 1536 72 0 5 chr13 98184485 98184681 -22099631 + B2_Mm2 SINE B2 1 195 0 3 1334 514 271 73 56 chr13 98184696 98185037 -22099275 - ORR1E LTR MaLR -5 374 3 3 1334 457 222 52 93 chr13 98185621 98185815 -22098497 + MER121 Unknown Unknown 12 197 -215 3 1334 1339 77 28 0 chr13 98186593 98186774 -22097538 + B2_Mm2 SINE B2 2 187 -8 3 1334 374 311 141 5 chr13 98186933 98187012 -22097300 - L1MD1 LINE L1 -1 6241 6156 3 1334 675 35 0 0 chr13 98187012 98187098 -22097214 + (TC)n Simple_repeat Simple_repeat 1 86 0 3 1334 374 311 141 5 chr13 98187098 98187238 -22097074 - L1MD1 LINE L1 -87 6155 5993 3 1334 431 281 32 88 chr13 98187625 98187875 -22096437 - L1MDa LINE L1 -6224 409 174 3 1334 385 231 111 40 chr13 98189018 98189144 -22095168 + MER3 DNA MER1_type 2 136 -73 3 1334 728 165 0 8 chr13 98189621 98189749 -22094563 - B1_Mur3 SINE Alu -9 140 14 3 1334 427 257 53 13 chr13 98190655 98190805 -22093507 + MLT1A LTR MaLR 1 156 -218 3 1334 272 342 72 7 chr13 98190825 98190978 -22093334 + MLT1A LTR MaLR 226 388 -2 3 1334 260 133 22 0 chr13 98190978 98191020 -22093292 + MLT2B1 LTR ERVL 523 565 -2 3 1334 344 297 81 25 chr13 98192531 98192683 -22091629 - L1MD2 LINE L1 -518 5841 5679 3 1334 267 54 0 0 chr13 98192683 98192720 -22091592 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1334 344 297 81 25 chr13 98192720 98192764 -22091548 - L1MD2 LINE L1 -681 5678 5634 3 1334 339 44 0 0 chr13 98192779 98192824 -22091488 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1334 894 259 65 68 chr13 98192837 98193322 -22090990 - L1MC LINE L1 -515 5664 5189 3 1334 297 75 0 0 chr13 98195763 98195803 -22088509 + (TCTG)n Simple_repeat Simple_repeat 4 43 0 3 1334 896 165 17 6 chr13 98196034 98196389 -22087923 + GA-rich Low_complexity Low_complexity 1 358 0 3 1334 694 324 66 14 chr13 98196624 98196912 -22087400 + Lx8 LINE L1 7026 7328 -145 3 1334 188 312 0 0 chr13 98197428 98197476 -22086836 - MIRb SINE MIR -8 260 213 3 1334 234 0 0 0 chr13 98197897 98197923 -22086389 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1334 2342 117 14 14 chr13 98199415 98199778 -22084534 - RLTR9A LTR ERVK -1 367 5 3 1334 371 289 31 43 chr13 98200746 98200866 -22083446 + MIR SINE MIR 81 203 -59 3 1334 317 229 166 64 chr13 98200866 98201053 -22083259 - B3 SINE B2 -10 206 1 3 1334 371 289 31 43 chr13 98201053 98201095 -22083217 + MIR SINE MIR 204 241 -21 3 1334 198 283 33 16 chr13 98201675 98201736 -22082576 - L2b LINE L2 -3 3372 3311 3 1334 29 28 0 0 chr13 98201780 98201816 -22082496 + AT_rich Low_complexity Low_complexity 1 36 0 3 1334 788 184 15 0 chr13 98201820 98201956 -22082356 + B1_Mus1 SINE Alu 6 143 -5 3 1334 26 0 0 0 chr13 98202049 98202075 -22082237 + AT_rich Low_complexity Low_complexity 1 26 0 3 1334 246 242 52 62 chr13 98202383 98202480 -22081832 + RLTR14 LTR ERV1 221 316 -66 3 1334 357 262 117 0 chr13 98202590 98202693 -22081619 - B3A SINE B2 -79 119 5 3 1334 701 280 64 25 chr13 98203040 98203322 -22080990 - L1MC4 LINE L1 -976 7066 6774 3 1334 448 318 49 34 chr13 98203322 98203527 -22080785 + ID_B1 SINE B4 1 208 -16 3 1334 822 55 0 0 chr13 98203590 98203699 -22080613 + B1_Mus1 SINE Alu 31 139 -9 3 1334 294 29 0 0 chr13 98203699 98203734 -22080578 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1334 671 215 332 17 chr13 98203735 98204033 -22080279 - RMER10B LTR ERVL -6 392 1 3 1334 234 300 0 124 chr13 98206771 98206908 -22077404 + B1F1 SINE Alu 11 130 -19 3 1334 189 0 0 0 chr13 98207669 98207690 -22076622 + (CAAAC)n Simple_repeat Simple_repeat 3 23 0 3 1334 266 188 28 47 chr13 98207692 98207798 -22076514 + (CAAA)n Simple_repeat Simple_repeat 3 106 0 3 1334 881 129 22 0 chr13 98208282 98208421 -22075891 - B1_Mus2 SINE Alu -5 142 1 3 1334 267 278 50 20 chr13 98209051 98209150 -22075162 - L2c LINE L2 -2 3385 3284 3 1334 461 301 99 11 chr13 98210162 98210424 -22073888 - B4A SINE B4 0 292 8 3 1334 360 0 0 0 chr13 98210780 98210820 -22073492 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1334 713 277 109 69 chr13 98210963 98211385 -22072927 + MLT1D LTR MaLR 65 503 -2 3 1334 911 242 103 62 chr13 98212756 98213126 -22071186 + L1MB4 LINE L1 5640 6024 -156 3 1334 406 0 0 36 chr13 98213196 98213252 -22071060 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 3 1334 1100 58 0 28 chr13 98213252 98213394 -22070918 - B1_Mus1 SINE Alu -9 139 2 3 1334 218 81 27 0 chr13 98214440 98214477 -22069835 + (TTTC)n Simple_repeat Simple_repeat 2 39 0 3 1334 277 160 47 27 chr13 98214579 98214727 -22069585 + (CA)n Simple_repeat Simple_repeat 1 151 0 4 1334 293 128 54 47 chr13 98214738 98214886 -22069426 + (CA)n Simple_repeat Simple_repeat 1 149 0 4 1334 227 160 27 59 chr13 98214917 98215103 -22069209 + (CA)n Simple_repeat Simple_repeat 1 180 0 4 1334 795 112 0 0 chr13 98215493 98215618 -22068694 + (TC)n Simple_repeat Simple_repeat 2 126 0 4 1334 809 107 25 0 chr13 98215630 98215752 -22068560 - B1_Mus1 SINE Alu -23 125 1 4 1334 439 247 93 71 chr13 98215752 98215835 -22068477 - MT2B LTR ERVL -444 157 71 4 1334 536 316 74 60 chr13 98216044 98216411 -22067901 - MER57E1 LTR ERV1 0 372 1 4 1334 1445 82 0 20 chr13 98217417 98217616 -22066696 - B2_Mm2 SINE B2 0 195 1 4 1334 336 299 80 0 chr13 98217623 98217760 -22066552 - MER5A1 DNA MER1_type -2 164 17 4 1334 826 100 40 54 chr13 98217817 98217965 -22066347 + B1_Mus2 SINE Alu 2 147 0 4 1334 386 20 20 0 chr13 98217990 98218041 -22066271 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1334 483 289 32 0 chr13 98218213 98218369 -22065943 + MER58A DNA MER1_type 49 209 -15 4 1334 1677 31 0 0 chr13 98218519 98218711 -22065601 + B2_Mm1t SINE B2 1 192 -1 4 1334 231 296 12 12 chr13 98219614 98219696 -22064616 + C-rich Low_complexity Low_complexity 4 85 0 4 1334 492 143 0 0 chr13 98221876 98221960 -22062352 + (CA)n Simple_repeat Simple_repeat 2 85 0 4 1334 352 211 13 13 chr13 98221971 98222048 -22062264 - ID4 SINE ID -6 77 1 4 1334 382 275 27 9 chr13 98222050 98222160 -22062152 - PB1D7 SINE Alu -8 112 1 4 1334 217 345 147 0 chr13 98222422 98222538 -22061774 - MIR SINE MIR -114 148 16 4 1334 965 142 7 20 chr13 98223613 98223764 -22060548 + B1_Mur4 SINE Alu 1 149 -1 4 1334 272 200 13 0 chr13 98223786 98223861 -22060451 + CT-rich Low_complexity Low_complexity 4 79 0 4 1334 1122 101 0 0 chr13 98224328 98224476 -22059836 + B1_Mus1 SINE Alu 1 148 0 4 1334 200 227 0 0 chr13 98226679 98226723 -22057589 + A-rich Low_complexity Low_complexity 1 44 0 4 1334 518 137 11 0 chr13 98229941 98230036 -22054276 + (TC)n Simple_repeat Simple_repeat 1 96 0 4 1334 666 212 74 18 chr13 98230520 98230611 -22053701 - RLTR20D LTR ERVK 0 505 415 4 1334 1056 38 0 0 chr13 98230611 98230744 -22053568 + (CA)n Simple_repeat Simple_repeat 2 134 0 4 1334 1107 162 188 46 chr13 98230744 98231034 -22053278 - RLTR20D LTR ERVK -91 414 1 4 1334 558 340 54 0 chr13 98231034 98231219 -22053093 + B3A SINE B2 4 198 0 4 1334 1839 141 9 59 chr13 98233679 98234018 -22050294 - RLTRETN_Mm LTR ERVK 0 322 1 4 1334 1089 215 14 0 chr13 98234428 98234651 -22049661 + URR1A DNA MER1_type 1 226 0 4 1334 21 0 0 0 chr13 98234740 98234761 -22049551 + AT_rich Low_complexity Low_complexity 1 21 0 4 1334 201 39 0 0 chr13 98234805 98234831 -22049481 + (TTG)n Simple_repeat Simple_repeat 1 26 0 4 1334 230 367 164 6 chr13 98234960 98235119 -22049193 + MIRc SINE MIR 14 197 -71 4 1334 302 351 52 33 chr13 98235161 98235314 -22048998 - HAL1-3A_ME LINE L1 -419 2439 2284 4 1334 185 259 0 18 chr13 98235521 98235576 -22048736 - L3 LINE CR1 -2334 2155 2102 4 1334 1065 87 0 0 chr13 98236793 98236965 -22047347 + (TC)n Simple_repeat Simple_repeat 2 173 0 4 1334 4238 116 76 11 chr13 98237206 98237902 -22046410 - RMER6A LTR ERVK -10 746 6 4 1334 275 176 147 0 chr13 98237965 98238033 -22046279 + ID4 SINE ID 5 82 -1 4 1334 191 297 51 59 chr13 98238692 98238810 -22045502 + MIR SINE MIR 16 132 -130 4 1334 297 375 38 23 chr13 98239672 98239803 -22044509 - L2c LINE L2 -9 3378 3246 4 1334 236 318 69 47 chr13 98240411 98240566 -22043746 + ORR1E LTR MaLR 1 142 -266 4 1334 330 26 0 0 chr13 98241206 98241245 -22043067 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 4 1334 1208 49 0 0 chr13 98241252 98241394 -22042918 - B1_Mus1 SINE Alu -6 142 1 4 1334 920 301 17 0 chr13 98241516 98241752 -22042560 - B4A SINE B4 -4 288 49 4 1334 506 318 113 88 chr13 98242917 98243314 -22040998 - MLT1J2 LTR MaLR -17 431 25 4 1334 202 216 0 0 chr13 98243375 98243412 -22040900 + L3 LINE CR1 4326 4362 -127 4 1334 225 115 63 32 chr13 98243593 98243656 -22040656 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 4 1334 432 0 0 0 chr13 98244442 98244490 -22039822 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1334 277 278 0 0 chr13 98244492 98244546 -22039766 - B4A SINE B4 -20 272 219 4 1334 307 309 12 0 chr13 98244701 98244785 -22039527 - B4A SINE B4 -59 233 149 4 1334 513 286 112 56 chr13 98245065 98245412 -22038900 - MTEa LTR MaLR 0 370 1 4 1334 1253 303 15 6 chr13 98245412 98245753 -22038559 + MLT1B LTR MaLR 44 387 -3 4 1334 297 0 0 0 chr13 98245764 98245797 -22038515 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1334 406 306 42 77 chr13 98245797 98246039 -22038273 - Charlie8 DNA MER1_type -2163 265 3 4 1334 1199 21 28 14 chr13 98246389 98246523 -22037789 + B1_Mm SINE Alu 1 138 -9 4 1334 255 31 0 0 chr13 98246523 98246555 -22037757 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1334 2193 114 9 0 chr13 98246665 98246980 -22037332 - ORR1A3 LTR MaLR -8 318 1 4 1334 268 317 12 123 chr13 98247204 98247274 -22037038 - Tigger9a DNA Tigger 0 732 669 4 1334 318 26 0 0 chr13 98247274 98247313 -22036999 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1334 268 317 12 123 chr13 98247313 98247404 -22036908 - Tigger9a DNA Tigger -64 668 589 4 1334 365 286 13 13 chr13 98247922 98248000 -22036312 + B4 SINE B4 211 288 -4 4 1334 459 0 0 0 chr13 98248003 98248054 -22036258 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1334 392 99 0 66 chr13 98248055 98248116 -22036196 + B1_Mur4 SINE Alu 80 137 -13 4 1334 342 0 0 0 chr13 98248116 98248154 -22036158 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 4 1334 392 99 0 66 chr13 98248154 98248168 -22036144 + B1_Mur4 SINE Alu 138 150 0 4 1334 1265 290 13 6 chr13 98248210 98248526 -22035786 + MLT1A0 LTR MaLR 46 363 -2 4 1334 215 340 77 10 chr13 98248926 98249030 -22035282 + MIRb SINE MIR 34 144 -124 4 1334 767 179 0 6 chr13 98249482 98249639 -22034673 + CT-rich Low_complexity Low_complexity 9 164 0 4 1334 716 184 88 0 chr13 98249639 98249775 -22034537 - B1_Mur2 SINE Alu -1 148 1 4 1334 273 320 201 8 chr13 98250097 98250414 -22033898 + MLT1E1A LTR MaLR 286 650 -3 4 1334 328 320 72 76 chr13 98250748 98251025 -22033287 + L1M5 LINE L1 4585 4860 -1286 4 1334 545 203 22 36 chr13 98251266 98251391 -22032921 - B1_Mur1 SINE Alu -21 128 2 4 1334 255 263 27 161 chr13 98251279 98251414 -22032898 - MT2B LTR ERVL -337 264 155 4 1334 361 311 35 50 chr13 98251414 98251593 -22032719 - MTEa LTR MaLR 0 370 203 4 1334 213 39 0 0 chr13 98251964 98251990 -22032322 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 1334 684 95 191 0 chr13 98252378 98252483 -22031829 - B1_Mus1 SINE Alu -21 127 3 4 1334 342 196 123 85 chr13 98252392 98252498 -22031814 - MT2B LTR ERVL -337 264 155 4 1334 3581 144 70 14 chr13 98252521 98253161 -22031151 + RLTR17 LTR ERVK 1 676 -16 4 1334 1112 82 0 7 chr13 98253177 98253325 -22030987 - B1_Mus2 SINE Alu 0 147 1 4 1334 369 328 62 21 chr13 98253540 98253780 -22030532 - L1ME4a LINE L1 -236 5888 5639 4 1334 265 339 83 0 chr13 98253797 98253918 -22030394 + LTR88b LTR Gypsy? 129 259 -578 4 1334 279 321 128 12 chr13 98254072 98254236 -22030076 + LTR88c LTR Genie? 676 858 -4 4 1334 3721 192 25 45 chr13 98254630 98255514 -22028798 - RMER13B LTR ERVK -4 904 39 4 1334 414 287 97 7 chr13 98256310 98256454 -22027858 - MER5A DNA MER1_type -32 157 1 4 1334 339 150 0 0 chr13 98256853 98256913 -22027399 + (ATGGTG)n Simple_repeat Simple_repeat 4 63 0 4 1334 21 0 0 0 chr13 98257028 98257049 -22027263 + AT_rich Low_complexity Low_complexity 1 21 0 4 1334 225 132 0 0 chr13 98258027 98258065 -22026247 + (TCCC)n Simple_repeat Simple_repeat 4 41 0 4 1334 219 270 13 13 chr13 98258432 98258507 -22025805 - PB1 SINE Alu -10 117 43 4 1334 217 0 29 29 chr13 98258922 98258956 -22025356 + (TTA)n Simple_repeat Simple_repeat 2 35 0 4 1334 710 152 56 8 chr13 98258956 98259082 -22025230 - B1_Mur3 SINE Alu -12 137 6 4 1334 389 235 84 42 chr13 98259082 98259098 -22025214 - ID_B1 SINE B4 -12 212 65 4 1334 657 0 0 0 chr13 98260684 98260757 -22023555 + (TTTC)n Simple_repeat Simple_repeat 2 74 0 4 1334 584 277 179 5 chr13 98262461 98262662 -22021650 + MTE2b LTR MaLR 1 236 -143 4 1334 450 375 5 21 chr13 98262658 98262846 -22021466 - MER44B DNA MER2_type -363 187 3 4 1334 23 0 0 0 chr13 98263327 98263350 -22020962 + GC_rich Low_complexity Low_complexity 1 23 0 4 1334 887 156 163 49 chr13 98264119 98264322 -22019990 + URR1A DNA MER1_type 1 226 0 4 1334 453 290 0 69 chr13 98265313 98265487 -22018825 + HAL1-2a_MD LINE L1 2346 2507 -517 4 1334 442 277 9 109 chr13 98265499 98265796 -22018516 + HAL1-2a_MD LINE L1 2347 2519 -505 4 1334 889 181 86 20 chr13 98266014 98266211 -22018101 - B3 SINE B2 -6 210 1 4 1334 216 276 17 0 chr13 98266487 98266545 -22017767 + CT-rich Low_complexity Low_complexity 3 61 0 4 1334 885 164 0 0 chr13 98266664 98266798 -22017514 - B1_Mur4 SINE Alu -14 136 3 4 1334 299 44 22 0 chr13 98267314 98267359 -22016953 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1334 618 39 0 0 chr13 98268450 98268527 -22015785 + (TG)n Simple_repeat Simple_repeat 2 78 0 4 1334 332 222 0 0 chr13 98268687 98268750 -22015562 - MTEb LTR MaLR -2 377 315 4 1334 451 309 25 38 chr13 98268809 98269078 -22015234 - MTEb LTR MaLR -66 313 1 4 1334 688 311 111 15 chr13 98270951 98271293 -22013019 + Lx8 LINE L1 7047 7421 -52 4 1334 711 78 0 25 chr13 98271295 98271414 -22012898 + (GAAA)n Simple_repeat Simple_repeat 1 116 0 4 1334 477 217 0 37 chr13 98271798 98271985 -22012327 + CT-rich Low_complexity Low_complexity 1 180 0 4 1334 282 268 0 0 chr13 98272776 98272847 -22011465 + GA-rich Low_complexity Low_complexity 2 72 0 4 1334 209 98 0 24 chr13 98273290 98273332 -22010980 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 1334 192 316 205 19 chr13 98273341 98273502 -22010810 - MIRc SINE MIR -21 247 57 5 1334 372 350 62 70 chr13 98274499 98274855 -22009457 + ORR1E LTR MaLR 1 353 -6 5 1334 334 226 58 98 chr13 98274849 98274988 -22009324 + MLT1F LTR MaLR 413 568 -11 5 1334 705 342 82 30 chr13 98275743 98276108 -22008204 - MT2A LTR ERVL -149 384 1 5 1334 2838 183 44 13 chr13 98277080 98277528 -22006784 + RLTR20B2 LTR ERVK 1 465 -95 5 1334 444 93 0 0 chr13 98277528 98277603 -22006709 + (TCTG)n Simple_repeat Simple_repeat 2 76 0 5 1334 2838 183 44 13 chr13 98277603 98277697 -22006615 + RLTR20B2 LTR ERVK 466 559 -1 5 1334 517 297 19 37 chr13 98279249 98279346 -22004966 - RLTR20D LTR ERVK 0 568 473 5 1334 486 0 0 0 chr13 98279346 98279400 -22004912 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1334 517 297 19 37 chr13 98279400 98279463 -22004849 - RLTR20D LTR ERVK -96 472 411 5 1334 416 197 101 50 chr13 98279449 98279588 -22004724 - RLTR16 LTR ERVK -359 146 1 5 1334 403 278 31 0 chr13 98279869 98279966 -22004346 - PB1D7 SINE Alu -15 105 6 5 1334 939 229 137 20 chr13 98280043 98280292 -22004020 - B4A SINE B4 -8 284 7 5 1334 234 260 13 40 chr13 98281090 98281166 -22003146 + MLT1C LTR MaLR 6 79 -388 5 1334 475 336 85 42 chr13 98281472 98281755 -22002557 - LTR53 LTR ERVL -212 307 13 5 1334 212 327 61 17 chr13 98281850 98281965 -22002347 + MIRc SINE MIR 47 166 -102 5 1334 342 364 53 40 chr13 98282992 98283149 -22001163 - MIR SINE MIR -3 259 95 5 1334 1298 238 67 17 chr13 98283149 98283508 -22000804 - MTEa LTR MaLR -2 377 1 5 1334 342 364 53 40 chr13 98283508 98283576 -22000736 - MIR SINE MIR -168 94 31 5 1334 23 33 0 0 chr13 98284208 98284238 -22000074 + GC_rich Low_complexity Low_complexity 1 30 0 5 1334 256 358 134 31 chr13 98285124 98285378 -21998934 + L2b LINE L2 3096 3375 0 5 1334 561 99 0 0 chr13 98285614 98285695 -21998617 + (GGA)n Simple_repeat Simple_repeat 2 82 0 5 1334 930 68 8 0 chr13 98286070 98286203 -21998109 + B1_Mus1 SINE Alu 15 148 0 5 1334 255 118 29 114 chr13 98286207 98286312 -21998000 + A-rich Low_complexity Low_complexity 4 99 0 5 1334 262 248 54 62 chr13 98288120 98288232 -21996080 + B3 SINE B2 106 216 0 5 1334 967 157 69 17 chr13 98288310 98288485 -21995827 - B2_Mm2 SINE B2 -10 185 2 5 1334 1102 101 14 0 chr13 98288534 98288682 -21995630 + B1_Mur4 SINE Alu 1 150 0 5 1334 850 294 47 22 chr13 98288700 98288975 -21995337 + B4 SINE B4 7 288 -4 5 1334 25 0 0 0 chr13 98289678 98289703 -21994609 + AT_rich Low_complexity Low_complexity 1 25 0 5 1334 239 158 0 0 chr13 98290521 98290559 -21993753 + B2_Mm2 SINE B2 3 40 -155 5 1334 1179 55 7 0 chr13 98290560 98290706 -21993606 + B1_Mus1 SINE Alu 2 148 0 5 1334 205 27 53 26 chr13 98290711 98290749 -21993563 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1334 687 264 0 0 chr13 98290754 98290902 -21993410 + B3 SINE B2 27 174 -42 5 1334 297 358 30 0 chr13 98291520 98291654 -21992658 - MTEa LTR MaLR -241 138 1 5 1334 184 293 0 33 chr13 98291655 98291715 -21992597 + MIRm SINE MIR 55 112 -164 5 1334 432 0 0 0 chr13 98291799 98291847 -21992465 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1334 881 261 19 0 chr13 98292257 98292468 -21991844 + B3 SINE B2 1 215 -1 5 1334 310 298 252 4 chr13 98292576 98292842 -21991470 + MER97b DNA MER1_type? 242 573 -480 5 1334 410 263 60 15 chr13 98292978 98293179 -21991133 + MER97b DNA MER1_type? 650 859 -194 5 1334 330 45 0 0 chr13 98294557 98294601 -21989711 + (TCTG)n Simple_repeat Simple_repeat 3 46 0 5 1334 1702 26 0 0 chr13 98294625 98294818 -21989494 - B2_Mm1t SINE B2 0 193 1 5 1334 191 36 36 0 chr13 98294941 98294969 -21989343 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 5 1334 883 141 178 0 chr13 98295428 98295591 -21988721 + RMER13B LTR ERVK 1 192 -716 5 1334 1097 153 110 29 chr13 98295844 98296053 -21988259 + URR1A DNA MER1_type 1 226 0 5 1334 324 70 0 0 chr13 98296525 98296568 -21987744 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1334 610 271 7 7 chr13 98296584 98296729 -21987583 - RSINE1 SINE B4 -18 147 3 5 1334 522 313 24 96 chr13 98296839 98297090 -21987222 + MER74B LTR ERVL 74 306 -316 5 1334 1367 174 9 0 chr13 98297632 98297856 -21986456 - URR1A DNA MER1_type 0 226 1 5 1334 251 209 14 69 chr13 98298436 98298508 -21985804 - MTEa LTR MaLR -63 316 249 5 1334 216 0 0 0 chr13 98298558 98298582 -21985730 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1334 1241 47 0 0 chr13 98298592 98298740 -21985572 - B1_Mus1 SINE Alu 0 148 1 5 1334 294 278 44 0 chr13 98299196 98299286 -21985026 + MT2A LTR ERVL 3 96 -437 5 1334 1004 260 91 19 chr13 98299208 98299529 -21984783 + MTEa LTR MaLR 19 353 -17 5 1334 21 36 0 0 chr13 98300326 98300354 -21983958 + AT_rich Low_complexity Low_complexity 1 28 0 5 1334 255 61 0 0 chr13 98300478 98300511 -21983801 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 5 1334 356 308 0 0 chr13 98300928 98301035 -21983277 + PB1D10 SINE Alu 4 110 -7 5 1334 1262 217 54 37 chr13 98301167 98301574 -21982738 - RMER10A LTR ERVL 0 442 29 5 1334 441 0 0 0 chr13 98301590 98301639 -21982673 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1334 297 0 0 0 chr13 98301639 98301671 -21982641 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 1334 671 250 117 31 chr13 98301866 98302122 -21982190 - Lx9 LINE L1 0 7644 7367 5 1334 336 237 125 35 chr13 98302134 98302278 -21982034 - Lx8 LINE L1 -870 6603 6447 5 1334 1463 68 10 10 chr13 98302315 98302509 -21981803 + B2_Mm2 SINE B2 2 195 0 5 1334 255 0 0 0 chr13 98302542 98302581 -21981731 - Lx2 LINE L1 -1 6996 6958 5 1334 23 0 0 0 chr13 98303691 98303714 -21980598 + AT_rich Low_complexity Low_complexity 1 23 0 5 1334 23 0 0 0 chr13 98303806 98303829 -21980483 + AT_rich Low_complexity Low_complexity 1 23 0 5 1334 183 80 0 0 chr13 98303884 98303909 -21980403 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 5 1335 394 324 39 66 chr13 98305009 98305191 -21979121 + MLT1B LTR MaLR 1 177 -213 5 1335 591 283 0 0 chr13 98305194 98305339 -21978973 + RSINE1 SINE B4 3 147 -18 5 1335 345 24 0 0 chr13 98305359 98305401 -21978911 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1335 364 289 41 146 chr13 98305431 98305650 -21978662 + MLT1B LTR MaLR 167 362 -28 5 1335 421 294 81 43 chr13 98305666 98305876 -21978436 - MLT1A1 LTR MaLR 0 408 191 5 1335 323 350 160 16 chr13 98305895 98306145 -21978167 - MLT2B3 LTR ERVL -149 405 120 5 1335 1680 196 42 34 chr13 98310081 98310461 -21973851 - MTD LTR MaLR -36 383 1 5 1335 324 0 0 0 chr13 98310609 98310645 -21973667 + (TC)n Simple_repeat Simple_repeat 2 37 0 5 1335 2142 237 109 49 chr13 98310655 98311290 -21973022 - Lx8 LINE L1 -144 7329 6657 5 1335 528 206 214 41 chr13 98311629 98311897 -21972415 - L1MB2 LINE L1 -5 6178 5852 5 1335 665 258 54 22 chr13 98311960 98312182 -21972130 - L1MB2 LINE L1 -468 5703 5475 5 1335 1095 243 101 39 chr13 98312200 98312555 -21971757 - MTEa LTR MaLR 0 379 3 5 1335 305 82 20 0 chr13 98313423 98313472 -21970840 + (CATA)n Simple_repeat Simple_repeat 3 52 0 5 1335 462 168 33 16 chr13 98313492 98313613 -21970699 + (TATG)n Simple_repeat Simple_repeat 4 126 0 5 1335 978 115 0 0 chr13 98313622 98313796 -21970516 + (TC)n Simple_repeat Simple_repeat 1 174 0 5 1335 753 235 116 28 chr13 98313819 98314069 -21970243 - B4A SINE B4 -20 272 1 5 1335 771 42 0 0 chr13 98314513 98314608 -21969704 + (TCC)n Simple_repeat Simple_repeat 2 96 0 5 1335 1803 177 100 3 chr13 98314608 98314977 -21969335 + MTD LTR MaLR 15 419 0 5 1335 919 257 113 17 chr13 98314978 98315271 -21969041 - MER2 DNA MER2_type 0 345 25 5 1335 371 267 67 0 chr13 98315574 98315664 -21968648 - PB1D10 SINE Alu -21 96 1 5 1335 243 308 0 21 chr13 98315749 98315842 -21968470 + MIR SINE MIR 159 249 -13 5 1335 529 230 89 0 chr13 98316781 98316916 -21967396 + B1_Mur1 SINE Alu 3 149 0 5 1335 713 302 69 11 chr13 98317425 98317686 -21966626 + B4 SINE B4 2 277 -15 5 1335 450 0 0 0 chr13 98317695 98317745 -21966567 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1335 225 250 0 0 chr13 98318210 98318254 -21966058 + polypurine Low_complexity Low_complexity 1 44 0 5 1335 189 0 0 0 chr13 98318346 98318367 -21965945 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1335 305 344 11 69 chr13 98319787 98319962 -21964350 + B3A SINE B2 14 178 -20 5 1335 1724 26 0 0 chr13 98320012 98320204 -21964108 - B2_Mm1t SINE B2 0 193 2 5 1335 324 0 0 0 chr13 98322612 98322648 -21961664 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1335 207 236 0 0 chr13 98322824 98322914 -21961398 + CT-rich Low_complexity Low_complexity 1 90 0 5 1335 230 0 0 32 chr13 98325053 98325084 -21959228 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 5 1335 189 0 0 0 chr13 98325371 98325392 -21958920 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 1335 1898 178 35 14 chr13 98325439 98325794 -21958518 + ORR1C1 LTR MaLR 1 367 -11 5 1335 3654 87 124 0 chr13 98325794 98326312 -21958000 - MT2B2 LTR ERVL 0 584 3 5 1335 1898 178 35 14 chr13 98326312 98326326 -21957986 + ORR1C1 LTR MaLR 368 378 0 5 1335 414 0 0 0 chr13 98326666 98326712 -21957600 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1335 21 0 0 0 chr13 98327599 98327620 -21956692 + AT_rich Low_complexity Low_complexity 1 21 0 5 1335 1775 141 28 28 chr13 98328442 98328763 -21955549 + ORR1A4 LTR MaLR 1 321 -8 5 1335 343 299 126 77 chr13 98328767 98329013 -21955299 - MLT1B LTR MaLR -1 389 132 5 1335 222 37 0 0 chr13 98332022 98332049 -21952263 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 5 1335 367 292 117 58 chr13 98332203 98332494 -21951818 - ORR1D2 LTR MaLR -42 328 21 6 1335 206 298 134 24 chr13 98332530 98332657 -21951655 - L4 LINE RTE -440 1589 1449 6 1335 715 150 105 0 chr13 98333459 98333592 -21950720 + B1_Mm SINE Alu 1 147 0 6 1335 317 24 24 0 chr13 98333597 98333639 -21950673 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 6 1335 725 285 32 18 chr13 98333875 98334154 -21950158 - RMER15 LTR ERVL -18 557 275 6 1335 345 255 61 10 chr13 98334597 98334696 -21949616 + L2a LINE L2 3282 3385 -41 6 1335 197 274 39 0 chr13 98335572 98335623 -21948689 - MIRb SINE MIR -182 86 34 6 1335 206 170 0 21 chr13 98337028 98337076 -21947236 + (CAAA)n Simple_repeat Simple_repeat 4 50 0 6 1335 1475 77 0 5 chr13 98337899 98338095 -21946217 - B2_Mm2 SINE B2 0 195 1 6 1335 586 247 0 52 chr13 98339541 98339695 -21944617 - B1_Mm SINE Alu 0 147 2 6 1335 186 43 0 0 chr13 98339695 98339718 -21944594 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1335 1031 83 31 2 chr13 98340855 98341409 -21942903 + (CA)n Simple_repeat Simple_repeat 1 570 0 6 1335 356 233 0 0 chr13 98341409 98341482 -21942830 + B4 SINE B4 3 75 -217 6 1335 180 0 0 0 chr13 98341525 98341545 -21942767 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1335 1064 199 38 12 chr13 98341562 98341913 -21942399 - RLTR24 LTR ERV1 -100 429 1 6 1335 572 201 9 8 chr13 98341949 98342077 -21942235 + B4 SINE B4 107 235 -57 6 1335 273 168 0 10 chr13 98343318 98343384 -21940928 - B1_Mur3 SINE Alu -14 135 73 6 1335 326 259 101 36 chr13 98343975 98344143 -21940169 + L1MDa LINE L1 1286 1464 -5169 6 1335 814 267 135 67 chr13 98344201 98344755 -21939557 + L1MDa LINE L1 1613 2204 -4429 6 1335 1082 159 124 5 chr13 98345930 98346132 -21938180 - URR1A DNA MER1_type 0 226 1 6 1335 180 111 0 0 chr13 98347656 98347683 -21936629 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1335 25 0 0 0 chr13 98348215 98348240 -21936072 + AT_rich Low_complexity Low_complexity 1 25 0 6 1335 1401 33 0 0 chr13 98348288 98348504 -21935808 + (TG)n Simple_repeat Simple_repeat 1 216 0 6 1335 225 0 0 0 chr13 98348963 98348988 -21935324 + (TG)n Simple_repeat Simple_repeat 1 25 0 6 1335 198 0 0 0 chr13 98349671 98349693 -21934619 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1335 320 285 90 42 chr13 98351300 98351561 -21932751 - L1MC LINE L1 -2363 5679 5418 6 1335 551 280 81 10 chr13 98351669 98351878 -21932434 - ID_B1 SINE B4 0 224 1 6 1335 368 238 209 39 chr13 98351882 98351967 -21932345 - L1M4 LINE L1 -808 5338 5229 6 1335 462 18 0 0 chr13 98351967 98352022 -21932290 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1335 368 278 219 19 chr13 98352022 98352325 -21931987 - L1M4 LINE L1 -918 5228 4861 6 1335 290 249 50 14 chr13 98352464 98352595 -21931717 + B1F1 SINE Alu 13 149 0 6 1335 623 205 0 64 chr13 98352605 98352730 -21931582 - B1_Mur1 SINE Alu -18 131 15 6 1335 203 312 0 0 chr13 98352834 98352882 -21931430 + (CGTG)n Simple_repeat Simple_repeat 1 48 0 6 1335 216 179 0 25 chr13 98352882 98352922 -21931390 + G-rich Low_complexity Low_complexity 2 40 0 6 1335 22 0 0 0 chr13 98352962 98352984 -21931328 + AT_rich Low_complexity Low_complexity 1 22 0 6 1335 355 264 45 9 chr13 98353014 98353125 -21931187 - B4 SINE B4 -175 117 3 6 1335 1086 181 42 5 chr13 98353671 98353887 -21930425 - URR1A DNA MER1_type -2 224 1 6 1335 212 375 106 0 chr13 98355141 98355245 -21929067 - PB1 SINE Alu -2 125 11 6 1335 1131 86 11 6 chr13 98355269 98355444 -21928868 + (TTC)n Simple_repeat Simple_repeat 3 178 0 6 1335 292 138 31 0 chr13 98355446 98355511 -21928801 + CT-rich Low_complexity Low_complexity 3 69 0 6 1335 832 139 21 28 chr13 98355514 98355655 -21928657 - B1_Mus2 SINE Alu -7 140 1 6 1335 253 322 16 8 chr13 98356306 98356428 -21927884 + MER65D LTR ERV1 1 123 -350 6 1335 488 281 89 31 chr13 98356893 98357084 -21927228 + MTD LTR MaLR 1 202 -217 6 1335 548 224 45 52 chr13 98357173 98357328 -21926984 + B3 SINE B2 57 210 -6 6 1335 624 211 137 0 chr13 98357374 98357549 -21926763 + MTD LTR MaLR 221 419 0 6 1335 380 71 18 0 chr13 98357750 98357806 -21926506 + (GGGA)n Simple_repeat Simple_repeat 1 57 0 6 1335 203 56 56 0 chr13 98357930 98357966 -21926346 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 6 1335 396 241 70 26 chr13 98358799 98358914 -21925398 + MTEb LTR MaLR 260 379 0 6 1335 396 0 0 0 chr13 98359116 98359160 -21925152 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1335 1987 128 134 85 chr13 98359635 98360060 -21924252 + RLTR41 LTR ERV1 1 446 0 6 1335 276 30 0 0 chr13 98360255 98360288 -21924024 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 1335 787 85 0 25 chr13 98360305 98360426 -21923886 - B2_Mm2 SINE B2 -77 118 1 6 1335 324 0 0 0 chr13 98360796 98360832 -21923480 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1335 311 235 82 0 chr13 98361200 98361285 -21923027 - B3A SINE B2 -57 141 50 6 1335 616 186 0 34 chr13 98361509 98361626 -21922686 - PB1D9 SINE Alu -5 115 3 6 1335 257 357 19 49 chr13 98361678 98361840 -21922472 + Cheshire DNA MER1_type 6 162 -2258 6 1335 26 50 0 0 chr13 98362212 98362252 -21922060 + AT_rich Low_complexity Low_complexity 1 40 0 6 1335 818 189 61 52 chr13 98363207 98363419 -21920893 + B3 SINE B2 2 215 -1 6 1335 1217 90 6 0 chr13 98363489 98363666 -21920646 + (TTC)n Simple_repeat Simple_repeat 1 178 0 6 1335 729 257 54 36 chr13 98363800 98364131 -21920181 + RLTR15 LTR ERVK 22 358 -1 6 1335 1594 149 67 100 chr13 98367107 98367323 -21916989 + ORR1C2 LTR MaLR 5 189 -195 6 1335 387 0 0 0 chr13 98367323 98367366 -21916946 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 6 1335 1594 149 67 100 chr13 98367366 98367538 -21916774 + ORR1C2 LTR MaLR 190 380 -4 6 1335 260 347 148 0 chr13 98367921 98368137 -21916175 - MIR SINE MIR 0 262 15 6 1335 262 234 0 45 chr13 98368423 98368490 -21915822 + CT-rich Low_complexity Low_complexity 4 67 0 6 1335 266 298 65 28 chr13 98369438 98369545 -21914767 + PB1D7 SINE Alu 5 115 -5 6 1335 908 117 25 0 chr13 98369549 98369712 -21914600 + (GAA)n Simple_repeat Simple_repeat 2 168 0 6 1335 1104 174 22 35 chr13 98369789 98370015 -21914297 - URR1A DNA MER1_type -3 223 1 6 1335 22 35 0 0 chr13 98371626 98371655 -21912657 + AT_rich Low_complexity Low_complexity 1 29 0 6 1335 510 236 115 46 chr13 98372675 98372847 -21911465 - RMER17C LTR ERVK 0 410 220 6 1335 476 16 0 16 chr13 98372847 98372909 -21911403 + (GA)n Simple_repeat Simple_repeat 2 62 0 6 1335 510 265 44 41 chr13 98372909 98373037 -21911275 - RMER17C LTR ERVK -191 219 1 6 1335 4073 124 146 96 chr13 98373037 98373373 -21910939 - RMER17C-int LTR ERVK 0 3238 2900 6 1335 183 80 0 0 chr13 98373373 98373398 -21910914 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1335 8872 182 78 82 chr13 98373398 98373666 -21910646 - RMER17C-int LTR ERVK -339 2899 2633 6 1335 256 231 0 30 chr13 98373666 98373733 -21910579 + LSU-rRNA_Hsa rRNA rRNA 4191 4255 -780 6 1335 8872 182 78 82 chr13 98373733 98376261 -21908051 - RMER17C-int LTR ERVK -339 2632 112 6 1335 351 0 0 0 chr13 98376261 98376300 -21908012 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1335 8872 196 62 78 chr13 98376300 98376427 -21907885 - RMER17C-int LTR ERVK -3127 111 1 6 1335 477 0 0 0 chr13 98376465 98376518 -21907794 + (GTGTG)n Simple_repeat Simple_repeat 3 55 0 6 1335 396 192 13 139 chr13 98376518 98376662 -21907650 - RMER17C LTR ERVK -65 345 221 6 1335 216 0 0 0 chr13 98376664 98376688 -21907624 + (GA)n Simple_repeat Simple_repeat 2 25 0 6 1335 193 318 33 22 chr13 98376716 98376806 -21907506 - MIR SINE MIR -102 160 70 6 1335 185 143 0 54 chr13 98377353 98377390 -21906922 + L4 LINE RTE 383 417 -1612 6 1335 216 0 0 0 chr13 98377886 98377910 -21906402 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1335 204 40 0 0 chr13 98377989 98378014 -21906298 + (ATGGTG)n Simple_repeat Simple_repeat 4 28 0 6 1335 432 0 0 0 chr13 98378201 98378249 -21906063 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1335 396 0 0 0 chr13 98378722 98378766 -21905546 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 1335 283 215 0 71 chr13 98380238 98380323 -21903989 - MTEb LTR MaLR -14 365 287 6 1335 279 156 0 61 chr13 98380436 98380518 -21903794 + G-rich Low_complexity Low_complexity 4 80 0 6 1335 1094 229 100 33 chr13 98381307 98381552 -21902760 - MLT1B LTR MaLR 0 390 124 6 1335 760 244 118 95 chr13 98381552 98381901 -21902411 - ORR1E LTR MaLR -2 357 1 6 1335 1094 229 100 33 chr13 98381901 98382016 -21902296 - MLT1B LTR MaLR -267 123 6 6 1335 1191 111 72 0 chr13 98382353 98382509 -21901803 + B2_Mm2 SINE B2 2 157 -38 6 1335 414 0 0 0 chr13 98382509 98382555 -21901757 + (TAA)n Simple_repeat Simple_repeat 3 48 0 6 1335 1191 111 72 0 chr13 98382555 98382578 -21901734 + B2_Mm2 SINE B2 158 192 -3 6 1335 343 286 11 11 chr13 98383439 98383531 -21900781 - B1F SINE Alu -51 98 7 6 1335 229 286 0 0 chr13 98384138 98384208 -21900104 + (TA)n Simple_repeat Simple_repeat 1 70 0 6 1335 564 15 0 0 chr13 98384652 98384717 -21899595 + (TTTC)n Simple_repeat Simple_repeat 4 68 0 6 1335 615 279 119 11 chr13 98384796 98385057 -21899255 - B4A SINE B4 -2 290 2 6 1335 560 342 84 47 chr13 98385638 98386176 -21898136 + MER115 DNA Tip100 92 684 -9 6 1335 244 217 0 0 chr13 98386532 98386578 -21897734 + CT-rich Low_complexity Low_complexity 2 47 0 6 1335 1613 57 0 0 chr13 98386587 98386780 -21897532 - B2_Mm1a SINE B2 0 193 1 6 1335 213 196 0 0 chr13 98386781 98386827 -21897485 + CT-rich Low_complexity Low_complexity 2 47 0 6 1335 437 50 0 16 chr13 98386834 98386895 -21897417 + (CCCCCT)n Simple_repeat Simple_repeat 1 60 0 6 1335 681 215 0 44 chr13 98386929 98387065 -21897247 - B1_Mur2 SINE Alu -19 130 1 6 1335 428 276 23 30 chr13 98387244 98387375 -21896937 - MER5A DNA MER1_type -57 132 3 6 1335 436 264 74 43 chr13 98388378 98388568 -21895744 - MIRb SINE MIR -45 223 27 6 1335 1176 54 0 13 chr13 98390187 98390324 -21893988 + B1_Mus2 SINE Alu 1 137 -10 6 1335 248 0 0 30 chr13 98390324 98390357 -21893955 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 6 1335 1176 54 0 13 chr13 98390357 98390368 -21893944 + B1_Mus2 SINE Alu 138 147 0 6 1335 495 0 0 0 chr13 98391187 98391242 -21893070 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1335 1227 29 0 0 chr13 98393035 98393175 -21891137 + B1_Mm SINE Alu 2 141 -6 6 1335 207 0 0 0 chr13 98393177 98393200 -21891112 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 6 1335 267 316 66 22 chr13 98394075 98394211 -21890101 + MIRc SINE MIR 20 161 -107 7 1335 445 261 28 21 chr13 98394221 98394362 -21889950 + B1F1 SINE Alu 8 149 0 7 1335 198 246 0 0 chr13 98395373 98395434 -21888878 + CT-rich Low_complexity Low_complexity 1 61 0 7 1335 240 111 0 0 chr13 98395762 98395807 -21888505 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 7 1335 741 23 0 0 chr13 98395846 98395933 -21888379 + (GA)n Simple_repeat Simple_repeat 2 88 0 7 1335 321 320 99 42 chr13 98396316 98396528 -21887784 + MER58A DNA MER1_type 1 224 0 7 1335 295 337 29 69 chr13 98397881 98398056 -21886256 - LTR16C LTR ERVL -310 179 12 7 1335 279 0 0 0 chr13 98398453 98398484 -21885828 + (TC)n Simple_repeat Simple_repeat 1 31 0 7 1335 225 289 130 30 chr13 98398485 98398585 -21885727 - PB1D10 SINE Alu -7 110 1 7 1335 27 62 0 0 chr13 98399081 98399129 -21885183 + AT_rich Low_complexity Low_complexity 1 48 0 7 1335 220 254 0 78 chr13 98399209 98399286 -21885026 + ID4 SINE ID 3 73 -10 7 1335 556 250 81 0 chr13 98399436 98399584 -21884728 + B3A SINE B2 1 160 -38 7 1335 222 37 0 0 chr13 98399599 98399626 -21884686 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1335 856 231 85 0 chr13 98399801 98400000 -21884312 - B3 SINE B2 0 216 1 7 1335 210 211 19 19 chr13 98400433 98400486 -21883826 + PB1D10 SINE Alu 28 80 -37 7 1335 21 0 0 0 chr13 98400623 98400644 -21883668 + AT_rich Low_complexity Low_complexity 1 21 0 7 1335 1089 129 0 6 chr13 98400783 98400955 -21883357 - URR1A DNA MER1_type -1 225 55 7 1335 480 240 91 25 chr13 98400955 98400976 -21883336 + CYRA11_Mm Unknown Y-chromosome 171 376 -241 7 1335 846 144 0 37 chr13 98402486 98402673 -21881639 + (CA)n Simple_repeat Simple_repeat 1 180 0 7 1335 279 0 0 0 chr13 98402714 98402745 -21881567 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1335 797 288 127 11 chr13 98402762 98403022 -21881290 - B4 SINE B4 -1 291 2 7 1335 219 202 18 9 chr13 98404169 98404279 -21880033 + (CTGGGG)n Simple_repeat Simple_repeat 6 116 0 7 1335 357 302 24 0 chr13 98404704 98404830 -21879482 + GA-rich Low_complexity Low_complexity 6 134 0 7 1335 720 314 121 29 chr13 98405332 98405778 -21878534 - MLT1D LTR MaLR -18 487 1 7 1335 1276 46 6 6 chr13 98406169 98406343 -21877969 + B2_Mm2 SINE B2 13 186 -9 7 1335 545 320 81 24 chr13 98406897 98407278 -21877034 + L1MA4 LINE L1 5573 5975 -325 7 1335 571 288 84 62 chr13 98407409 98407598 -21876714 + B4A SINE B4 1 203 -89 7 1335 2085 151 7 101 chr13 98407598 98408003 -21876309 + ORR1B2 LTR MaLR 1 367 0 7 1335 571 288 84 62 chr13 98408003 98408039 -21876273 + B4A SINE B4 204 231 -61 7 1335 838 189 0 26 chr13 98408040 98408192 -21876120 + B1_Mur2 SINE Alu 2 149 0 7 1335 295 261 15 0 chr13 98408279 98408344 -21875968 + B4A SINE B4 225 290 -2 7 1335 389 312 0 0 chr13 98409673 98409769 -21874543 + ID_B1 SINE B4 87 182 -42 7 1335 798 223 23 41 chr13 98409947 98410167 -21874145 + B3 SINE B2 1 216 0 7 1335 555 162 0 0 chr13 98410176 98410275 -21874037 + GA-rich Low_complexity Low_complexity 2 100 0 7 1335 462 245 38 0 chr13 98410923 98411029 -21873283 - PB1D10 SINE Alu -6 111 2 7 1335 279 0 0 0 chr13 98411251 98411282 -21873030 + (TC)n Simple_repeat Simple_repeat 2 32 0 7 1335 219 36 0 0 chr13 98411282 98411309 -21873003 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1335 189 0 0 0 chr13 98411484 98411505 -21872807 + (TG)n Simple_repeat Simple_repeat 1 21 0 7 1335 423 98 0 0 chr13 98412021 98412082 -21872230 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1335 200 390 12 0 chr13 98412246 98412418 -21871894 + (TATATG)n Simple_repeat Simple_repeat 2 175 0 7 1335 252 0 0 0 chr13 98412428 98412456 -21871856 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1335 306 0 0 0 chr13 98412456 98412489 -21871823 + (GA)n Simple_repeat Simple_repeat 1 34 0 7 1335 244 359 25 17 chr13 98412772 98412891 -21871421 + MIR SINE MIR 84 203 -59 7 1335 2011 184 52 3 chr13 98414203 98414590 -21869722 - MTD LTR MaLR -13 406 1 7 1335 743 191 0 7 chr13 98414848 98414996 -21869316 + MTD LTR MaLR 1 147 -272 7 1335 729 96 0 0 chr13 98416882 98417007 -21867305 + (TC)n Simple_repeat Simple_repeat 2 126 0 7 1335 477 0 0 0 chr13 98418518 98418571 -21865741 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 1335 279 0 0 0 chr13 98418571 98418601 -21865711 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1335 638 238 12 70 chr13 98418994 98419166 -21865146 - RSINE1 SINE B4 0 165 4 7 1335 303 340 172 5 chr13 98419167 98419365 -21864947 - B4A SINE B4 -60 232 2 7 1335 469 177 13 0 chr13 98420609 98420688 -21863624 + ID4_ SINE ID 1 80 -3 7 1335 362 259 43 43 chr13 98420723 98420840 -21863472 + PB1D10 SINE Alu 1 117 0 7 1335 545 299 41 66 chr13 98420947 98421258 -21863054 - ORR1E LTR MaLR -71 299 1 7 1335 16594 49 5 0 chr13 98423017 98425268 -21859044 - L1Md_F2 LINE L1 -498 6084 3821 7 1335 4180 17 0 2 chr13 98425268 98425734 -21858578 + L1Md_F2 LINE L1 6099 6563 -19 7 1335 234 0 0 0 chr13 98425890 98425916 -21858396 + (CAAAC)n Simple_repeat Simple_repeat 2 27 0 7 1335 1988 183 36 33 chr13 98426522 98426913 -21857399 + ORR1B1 LTR MaLR 1 392 -2 7 1335 227 408 66 0 chr13 98427130 98427282 -21857030 - MLT1H1 LTR MaLR -2 593 432 7 1335 298 401 26 26 chr13 98427412 98427568 -21856744 - MLT1H1 LTR MaLR -361 194 39 7 1335 404 226 11 28 chr13 98428049 98428231 -21856081 + CT-rich Low_complexity Low_complexity 2 180 0 7 1335 220 295 31 47 chr13 98428231 98428295 -21856017 - ID4 SINE ID -11 72 10 7 1335 479 328 60 127 chr13 98428815 98428869 -21855443 + B4A SINE B4 29 80 -212 7 1335 764 234 0 0 chr13 98428869 98429010 -21855302 + B1_Mur2 SINE Alu 1 141 -8 7 1335 479 328 60 127 chr13 98429010 98429238 -21855074 + B4A SINE B4 81 292 0 7 1335 207 0 0 0 chr13 98429271 98429294 -21855018 + (TC)n Simple_repeat Simple_repeat 1 23 0 7 1335 234 0 0 0 chr13 98429294 98429319 -21854993 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1335 2040 172 86 8 chr13 98430040 98430426 -21853886 + RMER1B Other Other 646 1061 -5 7 1335 197 277 34 57 chr13 98431037 98431125 -21853187 + L2b LINE L2 3275 3360 -15 7 1335 1327 210 9 44 chr13 98433999 98434626 -21849686 - L1_Mur3 LINE L1 -4415 1462 862 7 1335 292 256 24 8 chr13 98434896 98435022 -21849290 + L1MC1 LINE L1 5182 5309 -837 7 1335 25 0 0 0 chr13 98435022 98435047 -21849265 + AT_rich Low_complexity Low_complexity 1 25 0 7 1336 324 0 0 0 chr13 98435084 98435120 -21849192 + (CA)n Simple_repeat Simple_repeat 2 37 0 7 1336 2465 246 84 70 chr13 98435120 98436070 -21848242 + L1MC1 LINE L1 5370 6333 0 7 1336 528 291 35 41 chr13 98436377 98436574 -21847738 + MLT1F2 LTR MaLR 353 548 -12 7 1336 1005 278 92 46 chr13 98436952 98437389 -21846923 + L2 LINE L2 2212 2668 -751 7 1336 227 343 28 0 chr13 98437747 98437855 -21846457 - PB1D9 SINE Alu -7 113 3 7 1336 804 294 21 25 chr13 98438140 98438422 -21845890 + B4A SINE B4 8 288 -4 7 1336 200 218 0 52 chr13 98438442 98438500 -21845812 + (CATA)n Simple_repeat Simple_repeat 2 56 0 7 1336 189 330 199 10 chr13 98439608 98439804 -21844508 - MIR SINE MIR -16 246 14 7 1336 330 107 0 0 chr13 98440426 98440482 -21843830 + (GA)n Simple_repeat Simple_repeat 1 56 0 7 1336 25 0 0 0 chr13 98440802 98440827 -21843485 + AT_rich Low_complexity Low_complexity 1 25 0 7 1336 238 356 126 8 chr13 98442519 98442638 -21841674 + ORR1E LTR MaLR 8 140 -219 7 1336 953 285 11 26 chr13 98442658 98442925 -21841387 + B4A SINE B4 7 269 -23 7 1336 524 65 13 0 chr13 98443450 98443527 -21840785 + (GA)n Simple_repeat Simple_repeat 1 78 0 7 1336 373 219 133 1 chr13 98444814 98444923 -21839389 - MLT1C LTR MaLR -1 466 252 7 1336 283 331 110 77 chr13 98445998 98446361 -21837951 + LTR16B2 LTR ERVL 19 393 -69 7 1336 324 312 26 35 chr13 98447132 98447248 -21837064 + PB1D10 SINE Alu 1 115 -2 7 1336 348 309 82 61 chr13 98448613 98448887 -21835425 + MLT2B1 LTR ERVL 2 298 -256 7 1336 1463 132 116 47 chr13 98448892 98449210 -21835102 - RLTR23 LTR ERV1 0 430 91 7 1336 399 61 59 30 chr13 98449219 98449320 -21834992 + T-rich Low_complexity Low_complexity 3 106 0 7 1336 625 13 13 0 chr13 98449326 98449405 -21834907 - RLTR23 LTR ERV1 -327 103 24 7 1336 242 239 45 14 chr13 98449392 98449472 -21834840 + MLT2B1 LTR ERVL 380 466 -88 7 1336 21 0 0 0 chr13 98451540 98451561 -21832751 + AT_rich Low_complexity Low_complexity 1 21 0 7 1336 207 0 0 0 chr13 98451887 98451910 -21832402 + (TG)n Simple_repeat Simple_repeat 1 23 0 7 1336 265 245 117 0 chr13 98453593 98453687 -21830625 + MER57A-int LTR ERV1 5373 5477 -710 7 1336 446 279 225 24 chr13 98453724 98454049 -21830263 + MER57A-int LTR ERV1 5525 5915 -272 7 1336 198 0 0 0 chr13 98454171 98454193 -21830119 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 7 1336 1335 82 32 5 chr13 98454331 98454516 -21829796 + B2_Mm2 SINE B2 1 190 -5 7 1336 258 81 0 0 chr13 98454516 98454553 -21829759 + (GGA)n Simple_repeat Simple_repeat 1 37 0 7 1336 663 125 0 0 chr13 98454589 98454693 -21829619 + (GGGA)n Simple_repeat Simple_repeat 4 107 0 7 1336 539 304 105 6 chr13 98455302 98455561 -21828751 + Lx9 LINE L1 6946 7229 -244 7 1336 584 227 11 135 chr13 98455683 98455822 -21828490 + RLTR14 LTR ERV1 3 128 -254 7 1336 1778 144 30 66 chr13 98455822 98456157 -21828155 - ORR1A3 LTR MaLR -2 324 2 7 1336 584 227 11 135 chr13 98456157 98456195 -21828117 + RLTR14 LTR ERV1 129 158 -224 7 1336 2446 159 184 61 chr13 98456193 98456392 -21827920 + RMER19B LTR ERVK 190 400 -502 7 1336 1363 81 11 16 chr13 98456392 98456580 -21827732 + B2_Mm1t SINE B2 1 187 -6 7 1336 2446 159 184 61 chr13 98456580 98457004 -21827308 + RMER19B LTR ERVK 401 890 -12 7 1336 255 100 1086 24 chr13 98457449 98457530 -21826782 + URR1B DNA MER1_type 121 167 -58 7 1336 237 311 299 10 chr13 98457821 98458129 -21826183 + L2a LINE L2 3030 3426 0 7 1336 207 265 0 0 chr13 98459405 98459454 -21824858 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1336 586 317 45 34 chr13 98459485 98459753 -21824559 - B4A SINE B4 -20 272 2 7 1336 226 317 77 60 chr13 98460266 98460501 -21823811 - Tigger15a DNA TcMar -105 610 372 8 1336 560 246 74 7 chr13 98461158 98461293 -21823019 - RSINE1 SINE B4 -20 145 2 8 1336 1067 136 128 207 chr13 98461812 98462257 -21822055 - RMER17C LTR ERVK 0 410 1 8 1336 444 37 0 0 chr13 98462502 98462556 -21821756 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 1336 356 305 112 43 chr13 98463368 98463759 -21820553 - RMER5 LTR ERV1 -31 503 86 8 1336 1259 240 66 47 chr13 98465514 98465877 -21818435 + MTEb LTR MaLR 8 377 -2 8 1336 489 254 72 66 chr13 98467594 98467775 -21816537 - MTE2a LTR MaLR -4 375 194 8 1336 229 253 25 0 chr13 98467778 98467857 -21816455 + (CATG)n Simple_repeat Simple_repeat 4 84 0 8 1336 201 94 0 0 chr13 98467883 98467915 -21816397 + (CATG)n Simple_repeat Simple_repeat 4 35 0 8 1336 637 244 19 140 chr13 98467972 98468232 -21816080 - MTE2a LTR MaLR -161 258 1 8 1336 302 200 276 6 chr13 98468234 98468390 -21815922 + L1MC4a LINE L1 7684 7881 -1 8 1336 1830 193 32 75 chr13 98468601 98469071 -21815241 - Lx7 LINE L1 0 7696 7247 8 1336 336 230 48 89 chr13 98469074 98469198 -21815114 + Lx7 LINE L1 7250 7368 -328 8 1336 603 169 29 98 chr13 98469278 98469482 -21814830 + Lx7 LINE L1 7358 7547 -149 8 1336 647 212 7 35 chr13 98469495 98469637 -21814675 - Lx7 LINE L1 -441 7255 7118 8 1336 3761 204 47 59 chr13 98469643 98470522 -21813790 - Lx7 LINE L1 -913 6783 5916 8 1336 270 115 0 0 chr13 98470588 98470640 -21813672 + (T)n Simple_repeat Simple_repeat 1 52 0 8 1336 211 342 75 25 chr13 98470720 98470840 -21813472 - MER5A DNA MER1_type -21 168 43 8 1336 1252 28 0 7 chr13 98470933 98471079 -21813233 + B1_Mm SINE Alu 3 147 0 8 1336 1841 174 178 20 chr13 98471615 98471810 -21812502 + RLTR12B LTR ERVK 1 194 -334 8 1336 1240 34 0 20 chr13 98471810 98471960 -21812352 + B1_Mm SINE Alu 1 147 0 8 1336 1841 174 178 20 chr13 98471960 98472220 -21812092 + RLTR12B LTR ERVK 195 528 0 8 1336 378 304 0 17 chr13 98472320 98472437 -21811875 + PB1D10 SINE Alu 1 115 -2 8 1336 909 257 102 32 chr13 98472816 98473171 -21811141 - L1M3 LINE L1 -584 5728 5348 8 1336 1361 249 61 41 chr13 98473171 98473582 -21810730 + MTD LTR MaLR 1 419 0 8 1336 909 257 102 32 chr13 98473582 98473636 -21810676 - L1M3 LINE L1 -965 5347 5290 8 1336 540 296 18 36 chr13 98473673 98473838 -21810474 + RSINE1 SINE B4 4 165 0 8 1336 215 125 25 0 chr13 98473841 98473881 -21810431 + (TAA)n Simple_repeat Simple_repeat 2 42 0 8 1336 320 352 29 0 chr13 98473892 98473997 -21810315 - PB1D10 SINE Alu -5 112 5 8 1336 330 213 137 30 chr13 98473997 98474128 -21810184 - L1M3 LINE L1 -848 5292 5148 8 1336 997 250 26 95 chr13 98474467 98474500 -21809812 - B4 SINE B4 -7 285 267 8 1336 327 25 0 0 chr13 98474500 98474540 -21809772 + (TG)n Simple_repeat Simple_repeat 1 40 0 8 1336 997 250 26 95 chr13 98474540 98474638 -21809674 - B4 SINE B4 -26 266 167 8 1336 2339 142 32 8 chr13 98474638 98475007 -21809305 + ORR1C1 LTR MaLR 1 378 0 8 1336 997 250 26 95 chr13 98475007 98475179 -21809133 - B4 SINE B4 -126 166 2 8 1336 525 309 29 38 chr13 98476430 98476639 -21807673 - L4 LINE RTE -409 1620 1414 8 1336 335 231 4 0 chr13 98476809 98476889 -21807423 + MLT1A1 LTR MaLR 59 140 -268 8 1336 381 267 213 24 chr13 98476898 98477105 -21807207 + B4A SINE B4 29 274 -18 8 1336 825 84 118 30 chr13 98478668 98478803 -21805509 + B1_Mur3 SINE Alu 2 148 -1 8 1336 405 321 100 0 chr13 98480029 98480220 -21804092 + MLT2B3 LTR ERVL 119 323 -394 8 1336 360 0 0 0 chr13 98480238 98480278 -21804034 + (TC)n Simple_repeat Simple_repeat 1 40 0 8 1336 566 200 81 24 chr13 98480533 98480656 -21803656 + B1_Mur1 SINE Alu 3 132 -17 8 1336 369 318 8 8 chr13 98481086 98481216 -21803096 + MER5A DNA MER1_type 60 189 0 8 1336 252 185 0 0 chr13 98481489 98481543 -21802769 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 1336 482 283 58 0 chr13 98481729 98481849 -21802463 + B1F SINE Alu 13 139 -10 8 1336 1540 48 21 0 chr13 98482153 98482341 -21801971 - B2_Mm1t SINE B2 -1 192 1 8 1336 243 0 0 0 chr13 98483466 98483493 -21800819 + (CA)n Simple_repeat Simple_repeat 2 28 0 8 1336 323 57 0 36 chr13 98483759 98483814 -21800498 + (CAAAAA)n Simple_repeat Simple_repeat 2 54 0 8 1336 240 281 33 22 chr13 98484949 98485040 -21799272 - L2a LINE L2 -1 3425 3334 8 1336 310 252 103 37 chr13 98485064 98485171 -21799141 + B1F SINE Alu 1 114 -35 8 1336 512 230 142 10 chr13 98485309 98485479 -21798833 + B3A SINE B2 1 178 -17 8 1336 576 255 38 57 chr13 98486054 98486212 -21798100 - RSINE1 SINE B4 0 165 11 8 1336 4495 14 2 0 chr13 98486218 98486710 -21797602 + MT2_Mm LTR ERVL 1 493 0 8 1336 48341 15 6 0 chr13 98486710 98492038 -21792274 + MERVL-int LTR ERVL 1 5360 -125 8 1336 362 167 46 35 chr13 98492038 98492125 -21792187 + ORR1A3-int LTR MaLR 553 640 -1323 8 1336 321 0 0 0 chr13 98492125 98492163 -21792149 + MERVL-int LTR ERVL 5448 5485 0 8 1336 4469 16 2 0 chr13 98492163 98492655 -21791657 + MT2_Mm LTR ERVL 1 493 0 8 1336 297 0 0 0 chr13 98493332 98493365 -21790947 + (TC)n Simple_repeat Simple_repeat 2 34 0 8 1336 243 0 0 0 chr13 98493365 98493391 -21790921 + (TA)n Simple_repeat Simple_repeat 2 28 0 8 1336 500 132 9 0 chr13 98493765 98493871 -21790441 + (TG)n Simple_repeat Simple_repeat 2 108 0 8 1336 225 288 49 24 chr13 98494620 98494702 -21789610 + MER5A DNA MER1_type 54 137 -52 8 1336 324 0 0 0 chr13 98494719 98494755 -21789557 + (TTTTG)n Simple_repeat Simple_repeat 3 38 0 8 1336 373 136 358 0 chr13 98494796 98494877 -21789435 - Lx4B LINE L1 -142 6916 6807 8 1336 604 164 50 43 chr13 98494875 98495015 -21789297 + Lx4B LINE L1 6914 7054 -4 8 1336 297 0 0 0 chr13 98495053 98495086 -21789226 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1336 4473 8 0 24 chr13 98496458 98496963 -21787349 - MT2_Mm LTR ERVL 0 493 1 8 1336 321 0 0 0 chr13 98496963 98497001 -21787311 - MERVL-int LTR ERVL 0 5485 5448 8 1336 331 191 46 35 chr13 98497001 98497088 -21787224 - ORR1A3-int LTR MaLR -1323 640 553 8 1336 26461 17 0 0 chr13 98497088 98500000 -21784312 - MERVL-int LTR ERVL -125 5360 2448 8 1336 21986 9 14 0 chr13 98500000 98502414 -21781898 - MERVL-int LTR ERVL -3038 2447 1 1 1336 4473 8 0 24 chr13 98502414 98502919 -21781393 - MT2_Mm LTR ERVL 0 493 1 1 1336 265 303 101 0 chr13 98503495 98503584 -21780728 - PB1D9 SINE Alu -8 112 15 2 1336 2055 175 36 32 chr13 98503669 98504246 -21780066 - RLTR31_Mm LTR ERVK 0 692 1 3 1336 546 91 0 0 chr13 98504403 98504480 -21779832 + (GA)n Simple_repeat Simple_repeat 2 78 0 4 1336 480 326 34 6 chr13 98504836 98505012 -21779300 - MER5A DNA MER1_type 0 189 9 5 1336 294 367 141 25 chr13 98505078 98505483 -21778829 + L2 LINE L2 2311 2762 -657 6 1336 290 295 31 54 chr13 98505910 98506039 -21778273 - B4A SINE B4 -165 127 2 7 1336 461 346 71 34 chr13 98506227 98506493 -21777819 + MER2 DNA MER2_type 1 276 -69 8 1336 546 229 8 0 chr13 98507078 98507196 -21777116 - ID_B1 SINE B4 -2 222 104 9 1336 373 355 69 0 chr13 98507325 98507542 -21776770 + MER45C DNA Tip100 1 232 -721 1 1336 293 0 27 0 chr13 98509322 98509359 -21774953 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1336 890 100 0 37 chr13 98509405 98509592 -21774720 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1336 656 353 63 30 chr13 98509666 98510408 -21773904 + L1MD LINE L1 3608 4374 -1772 1 1336 257 324 39 0 chr13 98510711 98510813 -21773499 - B3A SINE B2 -91 107 2 1 1336 1145 43 35 0 chr13 98511597 98511738 -21772574 + B1_Mm SINE Alu 2 147 0 1 1336 642 256 0 0 chr13 98512253 98512433 -21771879 + (TATG)n Simple_repeat Simple_repeat 1 180 0 1 1336 316 272 33 0 chr13 98512458 98512550 -21771762 - PB1D10 SINE Alu 0 117 23 1 1336 820 226 145 0 chr13 98512838 98513059 -21771253 - MTEb LTR MaLR -122 257 5 1 1336 450 0 0 0 chr13 98514300 98514350 -21769962 + (GAAAA)n Simple_repeat Simple_repeat 3 52 0 1 1336 237 280 0 0 chr13 98514417 98514467 -21769845 + polypurine Low_complexity Low_complexity 4 53 0 1 1336 195 129 0 0 chr13 98514476 98514507 -21769805 + (CAAAG)n Simple_repeat Simple_repeat 3 33 0 2 1336 217 321 74 0 chr13 98515247 98515328 -21768984 + ID SINE ID 1 87 -137 2 1336 1455 98 35 4 chr13 98515419 98515645 -21768667 + L1_Mus3 LINE L1 6402 6634 -4 2 1336 461 290 164 14 chr13 98515701 98515981 -21768331 + MER63D DNA AcHobo 278 599 -462 2 1336 442 309 70 53 chr13 98515982 98516283 -21768029 + MER63D DNA AcHobo 753 1058 -3 2 1336 658 270 43 111 chr13 98516366 98516574 -21767738 + B3A SINE B2 2 195 0 2 1336 288 304 165 11 chr13 98518500 98518766 -21765546 + ORR1E LTR MaLR 37 343 -16 2 1336 243 0 0 0 chr13 98519119 98519146 -21765166 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 2 1336 1132 70 0 0 chr13 98519147 98519289 -21765023 - B1_Mus2 SINE Alu -5 142 1 2 1336 543 277 0 35 chr13 98519691 98519833 -21764479 + B1F2 SINE Alu 6 142 -7 2 1336 774 277 23 39 chr13 98519840 98520099 -21764213 + B4 SINE B4 3 257 -35 2 1336 257 333 0 0 chr13 98520099 98520177 -21764135 + (CACG)n Simple_repeat Simple_repeat 1 78 0 3 1336 237 65 0 0 chr13 98520193 98520224 -21764088 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1336 516 292 8 0 chr13 98521404 98521534 -21762778 + ID_B1 SINE B4 27 157 -67 3 1336 414 241 86 50 chr13 98521540 98521680 -21762632 + B4A SINE B4 9 153 -139 3 1336 704 100 0 0 chr13 98521828 98521928 -21762384 + B2_Mm2 SINE B2 2 101 -94 3 1336 349 304 78 68 chr13 98521928 98522047 -21762265 + ID_B1 SINE B4 2 222 -2 3 1336 2159 266 40 71 chr13 98522306 98522950 -21761362 + Lx6 LINE L1 6810 7433 -27 3 1336 252 0 0 0 chr13 98523110 98523138 -21761174 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 3 1336 225 0 0 0 chr13 98523249 98523274 -21761038 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 3 1336 269 225 20 48 chr13 98523395 98523506 -21760806 + PB1D7 SINE Alu 12 119 -1 3 1336 426 70 11 44 chr13 98523508 98523598 -21760714 + (CAAAAA)n Simple_repeat Simple_repeat 3 89 0 4 1336 298 303 37 0 chr13 98524044 98524153 -21760159 + PB1D10 SINE Alu 2 114 -3 4 1336 378 278 0 0 chr13 98525187 98525284 -21759028 - PB1D10 SINE Alu 0 117 21 4 1336 294 171 0 0 chr13 98525314 98525384 -21758928 + (TG)n Simple_repeat Simple_repeat 2 71 0 4 1336 243 239 0 173 chr13 98525507 98525588 -21758724 - ID2 SINE ID -16 67 1 4 1336 305 214 152 19 chr13 98525599 98525704 -21758608 - PB1 SINE Alu -8 119 1 4 1336 24 0 0 0 chr13 98526012 98526036 -21758276 + AT_rich Low_complexity Low_complexity 1 24 0 4 1336 865 126 41 27 chr13 98527719 98527866 -21756446 + B1_Mur4 SINE Alu 1 149 -1 4 1336 1080 74 0 0 chr13 98529260 98529395 -21754917 + B1_Mus1 SINE Alu 1 135 -13 4 1336 216 0 0 0 chr13 98530642 98530666 -21753646 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1336 558 345 96 11 chr13 98531205 98531466 -21752846 - B4A SINE B4 -8 284 2 5 1336 2113 108 71 6 chr13 98531582 98531946 -21752366 + ORR1B1 LTR MaLR 1 388 -6 5 1336 263 150 0 0 chr13 98532584 98532624 -21751688 + URR1B DNA MER1_type 1 40 -185 5 1336 813 140 0 0 chr13 98532624 98532760 -21751552 + (TA)n Simple_repeat Simple_repeat 2 137 0 5 1336 531 203 23 0 chr13 98532765 98532898 -21751414 + URR1B DNA MER1_type 90 225 0 5 1336 873 279 4 43 chr13 98534510 98534742 -21749570 + ID_B1 SINE B4 2 224 0 5 1336 1071 165 10 0 chr13 98535700 98535894 -21748418 - URR1B DNA MER1_type 0 225 30 5 1336 406 301 86 48 chr13 98536653 98536967 -21747345 - MER102b DNA MER1_type -13 328 3 5 1336 518 297 20 7 chr13 98537132 98537281 -21747031 + B3A SINE B2 1 151 -47 5 1336 801 150 0 0 chr13 98537282 98537462 -21746850 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 1336 207 0 0 0 chr13 98537463 98537486 -21746826 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1336 719 149 7 56 chr13 98537649 98537791 -21746521 + B1_Mus1 SINE Alu 6 140 -8 6 1336 908 53 8 0 chr13 98537794 98537925 -21746387 + (GA)n Simple_repeat Simple_repeat 1 132 0 6 1336 407 301 81 42 chr13 98537932 98538192 -21746120 + MER121 Unknown Unknown 96 365 -47 6 1336 207 0 0 0 chr13 98539583 98539606 -21744706 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1336 419 266 75 27 chr13 98540057 98540204 -21744108 + RSINE1 SINE B4 4 157 -8 6 1336 897 311 117 21 chr13 98540524 98541205 -21743107 - L1ME3 LINE L1 -84 6078 5336 6 1336 480 48 0 0 chr13 98541206 98541269 -21743043 + (TC)n Simple_repeat Simple_repeat 1 63 0 6 1336 484 327 69 22 chr13 98541294 98541569 -21742743 - L1ME3 LINE L1 -1006 5140 4853 6 1336 1488 232 86 5 chr13 98541799 98542184 -21742128 - MTD LTR MaLR -3 416 1 6 1336 438 20 0 0 chr13 98542310 98542361 -21741951 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1336 432 0 0 0 chr13 98542361 98542408 -21741904 + (GA)n Simple_repeat Simple_repeat 1 48 0 6 1336 3719 307 78 16 chr13 98542663 98542801 -21741511 + Lx8 LINE L1 6020 6173 -1300 7 1336 459 0 0 0 chr13 98542801 98542852 -21741460 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1336 333 0 0 0 chr13 98542852 98542888 -21741424 + (GA)n Simple_repeat Simple_repeat 2 38 0 7 1336 3719 307 78 16 chr13 98542888 98544090 -21740222 + Lx8 LINE L1 6174 7443 -30 7 1336 375 331 28 14 chr13 98544730 98544893 -21739419 - MIRb SINE MIR -102 166 2 7 1336 468 0 0 0 chr13 98545401 98545453 -21738859 + (TC)n Simple_repeat Simple_repeat 1 52 0 7 1336 744 217 18 12 chr13 98545529 98545692 -21738620 + RSINE1 SINE B4 2 165 0 7 1336 278 205 13 0 chr13 98545701 98545779 -21738533 + (CATA)n Simple_repeat Simple_repeat 1 79 0 7 1336 316 240 45 60 chr13 98547270 98547403 -21736909 - MamRep434 DNA TcMar -193 233 103 7 1336 202 238 0 0 chr13 98547615 98547657 -21736655 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 7 1336 244 282 86 47 chr13 98548089 98548390 -21735922 + L1ME4a LINE L1 5807 6119 -5 7 1336 991 274 93 45 chr13 98549298 98549654 -21734658 - MTE2b LTR MaLR -4 375 3 8 1336 245 135 0 19 chr13 98551363 98551416 -21732896 + CT-rich Low_complexity Low_complexity 1 52 0 8 1336 599 218 3 4 chr13 98551415 98551698 -21732614 + (CA)n Simple_repeat Simple_repeat 1 282 0 8 1336 229 252 0 0 chr13 98551960 98552025 -21732287 + GA-rich Low_complexity Low_complexity 1 65 0 8 1336 524 317 96 22 chr13 98552397 98552626 -21731686 + B4A SINE B4 43 288 -4 8 1336 499 287 21 29 chr13 98552710 98552850 -21731462 + B1F1 SINE Alu 11 149 0 8 1336 402 74 0 0 chr13 98555302 98555356 -21728956 + (TG)n Simple_repeat Simple_repeat 2 55 0 8 1336 238 308 120 48 chr13 98558964 98559131 -21725181 + L1MEd LINE L1 432 610 -5509 8 1336 679 340 137 30 chr13 98559379 98559877 -21724435 + MER21B LTR ERV1 73 623 -240 8 1336 268 203 73 98 chr13 98560818 98560900 -21723412 + RSINE1 SINE B4 86 165 0 8 1336 233 406 66 12 chr13 98561059 98561318 -21722994 + LTR88b LTR Gypsy? 130 402 -435 9 1336 2116 121 109 15 chr13 98562624 98563027 -21721285 + BGLII_B LTR ERVK 1 441 0 9 1336 225 360 32 8 chr13 98563086 98563212 -21721100 - MIR SINE MIR -17 245 117 9 1336 2601 145 46 36 chr13 98564042 98564134 -21720178 - RLTR16 LTR ERVK 0 505 415 9 1336 576 0 0 0 chr13 98564134 98564198 -21720114 + (CA)n Simple_repeat Simple_repeat 2 65 0 9 1336 2601 145 46 36 chr13 98564198 98564605 -21719707 - RLTR16 LTR ERVK -91 414 2 9 1336 223 306 0 65 chr13 98565251 98565328 -21718984 - ID2 SINE ID 0 83 12 9 1336 279 0 0 0 chr13 98565342 98565373 -21718939 + (TA)n Simple_repeat Simple_repeat 2 32 0 9 1336 1303 304 107 3 chr13 98565504 98566092 -21718220 - FordPrefect DNA Tip100 -64 1619 971 9 1337 429 369 63 22 chr13 98566635 98566857 -21717455 - FordPrefect DNA Tip100 -808 875 645 9 1337 643 302 44 13 chr13 98570822 98571050 -21713262 + B4A SINE B4 58 292 0 9 1337 295 239 14 0 chr13 98571056 98571127 -21713185 + RMER4B LTR ERVK 364 435 -150 9 1337 344 76 3 0 chr13 98571113 98571166 -21713146 + RMER4B LTR ERVK 465 511 -74 9 1337 1079 112 6 0 chr13 98571166 98571336 -21712976 + (GAA)n Simple_repeat Simple_repeat 1 171 0 1 1337 344 200 2913 0 chr13 98571336 98571364 -21712948 + RMER4B LTR ERVK 512 516 -69 9 1337 342 0 0 0 chr13 98571458 98571496 -21712816 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1337 474 299 53 44 chr13 98571564 98571791 -21712521 - ORR1E LTR MaLR -130 229 1 1 1337 322 324 141 47 chr13 98571821 98571903 -21712409 - LTR16D LTR ERVL -64 587 502 1 1337 486 0 0 0 chr13 98571903 98571957 -21712355 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1337 322 324 141 47 chr13 98571957 98572256 -21712056 - LTR16D LTR ERVL -150 501 170 1 1337 843 238 49 103 chr13 98572267 98572656 -21711656 - RLTR9A LTR ERVK 0 368 1 1 1337 237 65 0 0 chr13 98573083 98573114 -21711198 + (GGGTG)n Simple_repeat Simple_repeat 1 31 0 1 1337 801 179 107 31 chr13 98574344 98574540 -21709772 + B3 SINE B2 6 216 0 1 1337 251 146 18 0 chr13 98574666 98574721 -21709591 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1337 274 229 13 67 chr13 98574721 98574871 -21709441 + (GTGTG)n Simple_repeat Simple_repeat 4 145 0 1 1337 199 114 45 0 chr13 98574874 98574918 -21709394 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1337 398 148 48 30 chr13 98574934 98575101 -21709211 + (TG)n Simple_repeat Simple_repeat 2 171 0 1 1337 583 323 45 26 chr13 98575102 98575366 -21708946 - B4A SINE B4 0 292 24 1 1337 1224 312 171 36 chr13 98575873 98577278 -21707034 + L1M4b LINE L1 18 1612 -5722 1 1337 1256 20 7 0 chr13 98577297 98577443 -21706869 - B1_Mus2 SINE Alu 0 147 1 1 1337 453 216 60 71 chr13 98577470 98577654 -21706658 - L1MD3 LINE L1 -888 7107 6926 1 1337 293 121 80 124 chr13 98577667 98577780 -21706532 - Lx8 LINE L1 0 7473 7366 1 1337 429 36 0 0 chr13 98577787 98577842 -21706470 + (TC)n Simple_repeat Simple_repeat 2 56 0 1 1337 378 0 0 0 chr13 98577842 98577883 -21706429 + (TG)n Simple_repeat Simple_repeat 1 42 0 1 1337 246 206 109 16 chr13 98577885 98577949 -21706363 - Lx8 LINE L1 -213 7260 7191 1 1337 239 304 21 11 chr13 98578172 98578265 -21706047 + L1MB7 LINE L1 6031 6124 -60 1 1337 402 243 268 9 chr13 98578311 98578534 -21705778 - B4 SINE B4 0 292 12 1 1337 1427 67 10 10 chr13 98578642 98578837 -21705475 + B2_Mm2 SINE B2 1 195 0 1 1337 883 252 118 51 chr13 98579622 98579935 -21704377 + MER2 DNA MER2_type 6 339 -6 1 1337 804 160 0 0 chr13 98580102 98580227 -21704085 + B3 SINE B2 2 126 -90 1 1337 525 16 0 0 chr13 98581077 98581139 -21703173 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1337 430 310 144 30 chr13 98581346 98581582 -21702730 + B4A SINE B4 5 267 -25 1 1337 282 29 0 0 chr13 98581601 98581636 -21702676 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1337 234 0 0 0 chr13 98581636 98581661 -21702651 + (GA)n Simple_repeat Simple_repeat 2 27 0 1 1337 906 131 25 14 chr13 98582177 98582467 -21701845 + GA-rich Low_complexity Low_complexity 1 293 0 1 1337 1174 80 11 0 chr13 98582480 98582656 -21701656 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 1 1337 540 220 28 122 chr13 98582949 98583130 -21701182 - RSINE1 SINE B4 0 165 2 1 1337 309 319 0 9 chr13 98583258 98583372 -21700940 + L1MA7 LINE L1 4091 4203 -1940 1 1337 687 254 92 39 chr13 98583441 98583724 -21700588 + L1MA7 LINE L1 5433 5730 -570 1 1337 429 252 25 16 chr13 98583743 98583864 -21700448 + B1_Mus1 SINE Alu 27 148 0 1 1337 360 239 43 43 chr13 98583871 98584011 -21700301 + L1MA7 LINE L1 5716 5855 -436 1 1337 312 246 0 14 chr13 98584209 98584279 -21700033 + ID4_ SINE ID 1 69 -14 1 1337 262 222 107 36 chr13 98584550 98584634 -21699678 - L1MB1 LINE L1 -206 5962 5873 1 1337 524 316 48 5 chr13 98584649 98584859 -21699453 - L1MB1 LINE L1 -348 5823 5605 1 1337 698 283 108 54 chr13 98585723 98586093 -21698219 + L1MC4a LINE L1 7072 7455 -427 1 1337 3311 88 177 10 chr13 98586093 98586608 -21697704 + MT2B LTR ERVL 1 601 0 1 1337 698 283 108 54 chr13 98586608 98586700 -21697612 + L1MC4a LINE L1 7456 7559 -323 1 1337 477 0 0 0 chr13 98586809 98586862 -21697450 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1337 293 358 0 0 chr13 98587134 98587229 -21697083 + (CA)n Simple_repeat Simple_repeat 2 96 0 1 1337 788 180 161 21 chr13 98587291 98587484 -21696828 + URR1B DNA MER1_type 1 220 -5 1 1337 1180 211 189 14 chr13 98587514 98587869 -21696443 - MTD LTR MaLR 0 419 3 1 1337 583 140 44 6 chr13 98588950 98589108 -21695204 + (TG)n Simple_repeat Simple_repeat 2 165 0 1 1337 3329 31 0 0 chr13 98589346 98589733 -21694579 - L1Md_A LINE L1 -416 6166 5780 1 1337 2508 31 0 0 chr13 98589733 98590023 -21694289 + L1Md_A LINE L1 6293 6582 0 1 1337 3081 155 35 12 chr13 98590023 98590603 -21693709 - RLTR17 LTR ERVK -16 676 84 1 1337 612 122 0 0 chr13 98590744 98590867 -21693445 + (CA)n Simple_repeat Simple_repeat 1 123 0 1 1337 189 0 0 0 chr13 98591302 98591323 -21692989 + (TTG)n Simple_repeat Simple_repeat 2 22 0 1 1337 405 237 21 0 chr13 98591325 98591422 -21692890 - ID_B1 SINE B4 -3 221 123 1 1337 347 132 33 11 chr13 98591488 98591580 -21692732 + (CA)n Simple_repeat Simple_repeat 1 94 0 1 1337 693 0 0 0 chr13 98591658 98591735 -21692577 + (GGGAGA)n Simple_repeat Simple_repeat 3 79 0 1 1337 446 271 78 62 chr13 98592285 98592478 -21691834 + MTE2b LTR MaLR 5 200 -179 1 1337 284 271 93 67 chr13 98592776 98592934 -21691378 - RLTR21 LTR ERVK -318 1254 1088 1 1337 309 109 0 0 chr13 98592934 98592980 -21691332 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1337 284 271 93 67 chr13 98592980 98593015 -21691297 - RLTR21 LTR ERVK -485 1087 1056 1 1337 232 250 38 0 chr13 98593096 98593176 -21691136 + (TA)n Simple_repeat Simple_repeat 2 84 0 1 1337 423 0 0 0 chr13 98593989 98594036 -21690276 + (GA)n Simple_repeat Simple_repeat 1 47 0 1 1337 180 233 0 23 chr13 98594879 98594923 -21689389 - L3 LINE CR1 -3569 920 878 1 1337 552 238 39 121 chr13 98596491 98596697 -21687615 + B3A SINE B2 1 189 -9 1 1337 403 335 0 20 chr13 98597003 98597127 -21687185 + (TATG)n Simple_repeat Simple_repeat 3 124 0 1 1337 3040 65 28 3 chr13 98597127 98597516 -21686796 - MTB LTR MaLR 0 400 2 1 1337 403 335 0 20 chr13 98597516 98597543 -21686769 + (TATG)n Simple_repeat Simple_repeat 4 30 0 1 1337 228 235 0 0 chr13 98597547 98597615 -21686697 + (TA)n Simple_repeat Simple_repeat 2 69 0 1 1337 555 283 270 7 chr13 98598749 98599037 -21685275 - MTEa LTR MaLR -14 365 3 1 1337 471 271 80 14 chr13 98599171 98599357 -21684955 + L1MD3 LINE L1 7806 7976 -19 1 1337 474 267 94 27 chr13 98600112 98600335 -21683977 + Charlie5 DNA MER1_type 2384 2621 -3 1 1337 200 361 0 0 chr13 98601673 98601745 -21682567 + MIR SINE MIR 41 112 -96 1 1337 191 217 87 0 chr13 98602479 98602525 -21681787 + L2a LINE L2 3376 3425 -1 1 1337 535 315 125 39 chr13 98602708 98603173 -21681139 + MLT1D LTR MaLR 1 505 0 1 1337 253 373 84 23 chr13 98603759 98604058 -21680254 + Charlie2a DNA MER1_type 509 825 -2036 1 1337 231 208 264 0 chr13 98604072 98604097 -21680215 + PB1D9 SINE Alu 24 59 -61 1 1337 360 0 0 0 chr13 98604097 98604137 -21680175 + (CAGA)n Simple_repeat Simple_repeat 2 41 0 1 1337 231 208 264 0 chr13 98604137 98604183 -21680129 + PB1D9 SINE Alu 60 113 -7 1 1337 860 168 10 24 chr13 98604186 98604380 -21679932 - B3 SINE B2 -9 186 1 1 1337 922 267 144 53 chr13 98604393 98605203 -21679109 + Charlie2a DNA MER1_type 843 1726 -1135 1 1337 28 0 0 0 chr13 98605203 98605231 -21679081 + AT_rich Low_complexity Low_complexity 1 28 0 1 1337 324 0 0 0 chr13 98605526 98605562 -21678750 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1337 389 246 98 0 chr13 98605607 98605729 -21678583 - Charlie2b DNA MER1_type -927 1855 1722 1 1337 216 231 0 0 chr13 98606086 98606138 -21678174 + (TATG)n Simple_repeat Simple_repeat 3 54 0 1 1337 997 257 53 39 chr13 98606138 98606421 -21677891 - B4A SINE B4 0 292 6 1 1337 418 293 30 0 chr13 98607118 98607251 -21677061 - MIR SINE MIR -63 199 63 1 1337 249 362 36 30 chr13 98607781 98607949 -21676363 + LTR16A LTR ERVL 276 444 -7 1 1337 594 302 19 42 chr13 98608177 98608391 -21675921 + ID_B1 SINE B4 2 210 -14 1 1337 1993 233 40 21 chr13 98608521 98609039 -21675273 - RMER5 LTR ERV1 -5 529 2 1 1337 188 235 20 0 chr13 98609296 98609347 -21674965 + MIRc SINE MIR 96 147 -121 1 1337 550 314 74 59 chr13 98609351 98609689 -21674623 - MLT1A LTR MaLR 0 374 32 1 1337 701 283 43 96 chr13 98610743 98611024 -21673288 + B4A SINE B4 16 281 -11 1 1337 242 237 0 62 chr13 98611024 98611105 -21673207 - L1MB8 LINE L1 -12 6172 6097 1 1337 459 0 0 0 chr13 98611105 98611156 -21673156 + (CATATA)n Simple_repeat Simple_repeat 1 51 0 1 1337 306 61 41 0 chr13 98611158 98611207 -21673105 + HAL1-3A_ME LINE L1 1978 2028 -830 1 1337 303 302 74 47 chr13 98611230 98611445 -21672867 - L1MB8 LINE L1 -117 6061 5841 1 1337 501 306 0 7 chr13 98611832 98611967 -21672345 - ID_B1 SINE B4 -3 221 88 1 1337 452 252 39 0 chr13 98612096 98612199 -21672113 + Tigger5 DNA MER2_type 2300 2406 0 1 1337 268 51 128 0 chr13 98613589 98613628 -21670684 - ORR1D1 LTR MaLR -12 362 319 1 1337 1092 151 5 96 chr13 98613619 98613839 -21670473 - ORR1D1 LTR MaLR -174 200 1 1 1337 938 274 108 40 chr13 98614133 98614498 -21669814 - MTD LTR MaLR -14 405 22 1 1337 368 335 103 9 chr13 98616506 98616738 -21667574 - MIRb SINE MIR -13 255 2 1 1337 850 306 101 0 chr13 98616750 98617067 -21667245 + MLT1A0 LTR MaLR 1 349 -16 1 1337 2260 92 21 58 chr13 98617991 98618372 -21665940 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1337 7338 83 111 72 chr13 98618372 98619629 -21664683 + IAPEz-int LTR ERVK 8 1313 -5168 1 1337 29414 21 1 1 chr13 98619627 98622895 -21661417 + IAPEz-int LTR ERVK 3209 6478 -3 1 1337 2260 92 21 58 chr13 98622899 98623280 -21661032 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1337 875 255 36 46 chr13 98624257 98624586 -21659726 - Lx9 LINE L1 -3 7641 7316 1 1337 1045 223 44 0 chr13 98624743 98624949 -21659363 - B3 SINE B2 -1 215 1 1 1337 761 177 7 47 chr13 98625857 98626005 -21658307 + B1_Mus2 SINE Alu 6 147 0 1 1337 292 56 18 36 chr13 98626005 98626061 -21658251 + (CAAAAA)n Simple_repeat Simple_repeat 6 60 0 1 1337 1031 113 20 0 chr13 98626532 98626683 -21657629 + B2_Mm2 SINE B2 1 154 -41 1 1337 288 0 0 0 chr13 98626683 98626715 -21657597 + (CAAT)n Simple_repeat Simple_repeat 1 32 0 1 1337 222 269 0 0 chr13 98626844 98626896 -21657416 + MIR SINE MIR 93 144 -118 1 1337 383 345 55 41 chr13 98627711 98627929 -21656383 - RMER15 LTR ERVL 0 575 355 1 1337 287 338 42 46 chr13 98628447 98628664 -21655648 + MLT1J LTR MaLR 110 325 -187 1 1337 555 16 0 0 chr13 98628697 98628761 -21655551 + (TC)n Simple_repeat Simple_repeat 2 65 0 2 1337 802 171 0 0 chr13 98628811 98628940 -21655372 - B1_Mus2 SINE Alu -16 131 3 2 1337 201 74 0 0 chr13 98629054 98629081 -21655231 + (T)n Simple_repeat Simple_repeat 1 27 0 2 1337 619 277 8 0 chr13 98630422 98630552 -21653760 - ID_B1 SINE B4 -14 210 80 2 1337 1027 85 7 0 chr13 98630650 98630791 -21653521 + B2_Mm1t SINE B2 52 193 0 2 1337 465 19 0 0 chr13 98630998 98631052 -21653260 + (GGA)n Simple_repeat Simple_repeat 1 54 0 2 1337 234 0 0 0 chr13 98631259 98631285 -21653027 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 2 1337 252 310 0 53 chr13 98632196 98632271 -21652041 + ID4_ SINE ID 1 71 -12 2 1337 898 231 39 0 chr13 98632387 98632595 -21651717 + B3 SINE B2 1 216 0 2 1337 25 51 0 0 chr13 98632655 98632694 -21651618 + AT_rich Low_complexity Low_complexity 1 39 0 2 1337 1312 96 21 16 chr13 98633076 98633266 -21651046 + B2_Mm2 SINE B2 2 192 -3 2 1337 214 319 12 63 chr13 98633317 98633457 -21650855 + MIRc SINE MIR 116 245 -23 2 1337 456 250 124 8 chr13 98633467 98633596 -21650716 - MTEa LTR MaLR -7 372 229 2 1337 227 351 54 0 chr13 98633625 98633699 -21650613 - MIR SINE MIR -164 98 21 2 1337 635 291 62 127 chr13 98634059 98634429 -21649883 + MLT1E1A LTR MaLR 301 672 -8 2 1337 504 330 20 5 chr13 98634563 98634767 -21649545 + B3 SINE B2 2 208 -8 2 1337 2070 94 61 13 chr13 98634919 98635230 -21649082 - ORR1A3 LTR MaLR 0 326 1 2 1337 278 339 128 6 chr13 98635367 98635539 -21648773 - L3b LINE CR1 -200 282 90 2 1337 737 320 97 32 chr13 98636032 98636403 -21647909 - MLT1C LTR MaLR -48 419 25 2 1337 329 323 45 15 chr13 98636552 98636684 -21647628 + MLT1A1 LTR MaLR 269 404 -4 2 1337 269 315 0 40 chr13 98636790 98636866 -21647446 + ID4_ SINE ID 2 74 -9 2 1337 195 218 0 0 chr13 98637119 98637174 -21647138 + (TATG)n Simple_repeat Simple_repeat 1 55 0 2 1337 288 0 0 0 chr13 98639381 98639413 -21644899 + (TC)n Simple_repeat Simple_repeat 2 33 0 2 1337 252 0 0 0 chr13 98639413 98639440 -21644872 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1337 856 144 200 11 chr13 98641381 98641571 -21642741 - URR1A DNA MER1_type 0 226 1 2 1337 1139 176 70 14 chr13 98642744 98642957 -21641355 - URR1A DNA MER1_type 0 226 2 2 1337 1028 145 121 34 chr13 98645191 98645398 -21638914 - URR1B DNA MER1_type 0 225 1 2 1337 338 362 57 21 chr13 98645592 98645784 -21638528 - MIRb SINE MIR -50 218 20 2 1337 551 112 9 0 chr13 98647164 98647271 -21637041 + (TC)n Simple_repeat Simple_repeat 1 108 0 2 1337 317 271 224 0 chr13 98647271 98647378 -21636934 - ID_B1 SINE B4 -1 223 93 2 1337 198 0 0 0 chr13 98647390 98647412 -21636900 + (CTTTG)n Simple_repeat Simple_repeat 4 25 0 2 1337 2511 89 173 0 chr13 98647745 98648150 -21636162 - IAPLTR2_Mm LTR ERVK 0 475 1 2 1337 443 258 66 3 chr13 98648223 98648338 -21635974 - PB1D9 SINE Alu 0 120 3 2 1337 316 303 80 49 chr13 98648928 98649091 -21635221 + Tigger12A DNA MER2_type 136 303 -488 2 1337 538 314 71 6 chr13 98649094 98649264 -21635048 + Tigger12A DNA MER2_type 607 787 -4 2 1337 521 324 142 30 chr13 98649446 98649818 -21634494 + Tigger15a DNA TcMar 8 421 -294 2 1337 292 291 73 66 chr13 98649866 98650002 -21634310 + RSINE1 SINE B4 17 153 -12 2 1337 615 153 269 7 chr13 98650032 98650177 -21634135 - RMER1A Other Other -10 1020 838 2 1337 227 299 110 15 chr13 98650191 98650327 -21633985 + Tigger15a DNA TcMar 513 661 -54 2 1337 268 206 302 38 chr13 98651269 98651375 -21632937 - MIR SINE MIR -38 224 91 2 1337 198 0 0 0 chr13 98652528 98652550 -21631762 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1337 363 167 0 0 chr13 98652845 98652911 -21631401 + CT-rich Low_complexity Low_complexity 1 66 0 2 1337 438 20 0 0 chr13 98652911 98652962 -21631350 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1337 22 70 0 0 chr13 98653147 98653190 -21631122 + AT_rich Low_complexity Low_complexity 1 43 0 2 1337 273 57 0 0 chr13 98654002 98654037 -21630275 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1337 189 0 0 0 chr13 98655370 98655391 -21628921 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2 1337 404 213 0 26 chr13 98655593 98655670 -21628642 - MLT1B LTR MaLR -21 369 295 2 1337 615 92 0 0 chr13 98655789 98655876 -21628436 + (TTCC)n Simple_repeat Simple_repeat 3 89 0 2 1337 412 288 36 7 chr13 98655890 98656030 -21628282 - B1F SINE Alu -1 148 5 2 1337 387 310 33 66 chr13 98656040 98656192 -21628120 - MLT1B LTR MaLR -215 150 4 2 1337 331 365 34 7 chr13 98656195 98656344 -21627968 - MIR SINE MIR -97 165 13 2 1337 328 300 57 32 chr13 98659002 98659126 -21625186 + LTR48 LTR ERV1 4 130 -657 2 1337 320 258 72 110 chr13 98659329 98659547 -21624765 + MER34 LTR ERV1 293 608 -14 2 1337 452 280 230 12 chr13 98660146 98660372 -21623940 + MLT1A0 LTR MaLR 93 408 0 2 1337 475 345 0 22 chr13 98660522 98660706 -21623606 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1337 384 59 0 0 chr13 98661370 98661421 -21622891 + (GGGA)n Simple_repeat Simple_repeat 2 52 0 2 1337 246 95 0 0 chr13 98663436 98663478 -21620834 + (A)n Simple_repeat Simple_repeat 1 42 0 2 1337 827 153 0 33 chr13 98664009 98664191 -21620121 + GA-rich Low_complexity Low_complexity 5 180 0 2 1337 624 27 0 0 chr13 98664470 98664544 -21619768 + (TTCC)n Simple_repeat Simple_repeat 2 75 0 2 1337 184 296 139 36 chr13 98664560 98664697 -21619615 - L3 LINE CR1 -1837 2652 2502 2 1337 1375 233 96 12 chr13 98665060 98665394 -21618918 - ORR1D2 LTR MaLR -8 362 1 2 1337 579 53 0 0 chr13 98665500 98665575 -21618737 + (TTCC)n Simple_repeat Simple_repeat 3 77 0 2 1337 359 244 148 37 chr13 98666666 98666828 -21617484 - MIRb SINE MIR -12 256 77 2 1337 25 0 0 0 chr13 98667039 98667064 -21617248 + AT_rich Low_complexity Low_complexity 1 25 0 2 1337 790 325 42 14 chr13 98667346 98667633 -21616679 - MLT1A0 LTR MaLR 0 365 71 2 1337 24 0 0 0 chr13 98669415 98669439 -21614873 + AT_rich Low_complexity Low_complexity 1 24 0 2 1337 306 256 22 104 chr13 98670134 98670269 -21614043 + MT2B LTR ERVL 155 278 -323 2 1337 830 109 15 15 chr13 98670153 98670284 -21614028 + B1_Mur3 SINE Alu 7 137 -12 2 1337 356 55 0 18 chr13 98670288 98670344 -21613968 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 2 1337 529 302 133 20 chr13 98671222 98671418 -21612894 - ID_B1 SINE B4 -1 223 6 2 1337 222 274 57 40 chr13 98671602 98671731 -21612581 - MIRc SINE MIR -105 171 32 2 1337 660 111 0 0 chr13 98674289 98674388 -21609924 + (TG)n Simple_repeat Simple_repeat 2 100 0 2 1337 491 259 0 35 chr13 98674388 98674493 -21609819 - PB1D10 SINE Alu -9 108 5 2 1337 509 56 0 27 chr13 98675262 98675336 -21608976 + (GGGA)n Simple_repeat Simple_repeat 3 74 0 2 1337 365 296 88 72 chr13 98675933 98676478 -21607834 + L1MC5 LINE L1 7357 7910 -51 2 1337 244 343 29 0 chr13 98677642 98677744 -21606568 + B4A SINE B4 1 105 -187 2 1337 308 286 67 54 chr13 98677831 98678021 -21606291 + B4 SINE B4 82 290 -2 2 1337 587 121 0 10 chr13 98678184 98678284 -21606028 + (GGA)n Simple_repeat Simple_repeat 3 101 0 2 1337 1019 117 0 22 chr13 98678286 98678470 -21605842 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1337 289 229 19 0 chr13 98678904 98679009 -21605303 + (CA)n Simple_repeat Simple_repeat 2 108 0 2 1337 201 74 0 0 chr13 98679167 98679194 -21605118 + (CAGA)n Simple_repeat Simple_repeat 2 28 0 2 1337 267 315 0 0 chr13 98681986 98682059 -21602253 + PB1D10 SINE Alu 1 73 -44 2 1337 182 216 0 0 chr13 98683334 98683371 -21600941 - L2b LINE L2 -23 3352 3316 2 1337 266 244 92 11 chr13 98683574 98683661 -21600651 + L1ME2 LINE L1 5587 5680 -484 2 1337 544 318 55 15 chr13 98683685 98683956 -21600356 + L1ME2 LINE L1 5780 6061 -103 2 1337 339 335 112 15 chr13 98685130 98685327 -21598985 - MIR SINE MIR -46 216 1 2 1337 189 0 0 0 chr13 98685634 98685655 -21598657 + (GTTTG)n Simple_repeat Simple_repeat 3 23 0 2 1337 225 0 0 0 chr13 98685783 98685808 -21598504 + (TCTG)n Simple_repeat Simple_repeat 1 25 0 2 1337 338 295 127 37 chr13 98686196 98686330 -21597982 - RSINE1 SINE B4 -18 147 2 2 1337 324 318 0 0 chr13 98686531 98686619 -21597693 + B3A SINE B2 3 90 -108 2 1337 423 0 0 0 chr13 98686626 98686673 -21597639 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1337 1995 224 9 7 chr13 98686675 98687094 -21597218 - MTC LTR MaLR -1 420 1 2 1337 2378 79 31 3 chr13 98687173 98687491 -21596821 + ORR1A2 LTR MaLR 1 327 0 2 1337 744 283 137 19 chr13 98688934 98689190 -21595122 + B4A SINE B4 1 286 -6 2 1337 405 0 0 0 chr13 98690177 98690222 -21594090 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2 1337 381 182 33 26 chr13 98690280 98690432 -21593880 + GA-rich Low_complexity Low_complexity 4 156 0 2 1337 593 250 34 78 chr13 98692220 98692424 -21591888 - B3A SINE B2 -1 197 3 2 1337 374 301 32 19 chr13 98692450 98692606 -21591706 + MER58B DNA MER1_type 182 339 -2 2 1337 831 293 11 8 chr13 98694106 98694371 -21589941 + MLT1B LTR MaLR 125 390 0 2 1337 702 261 21 32 chr13 98694810 98694996 -21589316 + ID_B1 SINE B4 12 195 -29 2 1337 343 290 50 98 chr13 98695061 98695365 -21588947 + RSINE1 SINE B4 2 290 -2 2 1337 500 0 17 0 chr13 98695365 98695425 -21588887 + (TC)n Simple_repeat Simple_repeat 1 61 0 2 1337 343 205 20 102 chr13 98695425 98695442 -21588870 + RSINE1 SINE B4 150 165 0 2 1337 27 0 0 0 chr13 98695573 98695600 -21588712 + AT_rich Low_complexity Low_complexity 1 27 0 2 1337 264 308 13 2 chr13 98696398 98696493 -21587819 + MIR SINE MIR 16 110 -158 2 1337 193 111 0 62 chr13 98697138 98697186 -21587126 + C-rich Low_complexity Low_complexity 2 46 0 2 1338 192 40 0 0 chr13 98697714 98697739 -21586573 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1338 1171 193 0 9 chr13 98698941 98699161 -21585151 - URR1B DNA MER1_type -7 218 1 3 1338 468 311 107 45 chr13 98701785 98702095 -21582217 - MER2B DNA MER2_type -7 329 1 3 1338 27 62 0 0 chr13 98703060 98703108 -21581204 + AT_rich Low_complexity Low_complexity 1 48 0 3 1338 1240 152 47 5 chr13 98703722 98703934 -21580378 - URR1B DNA MER1_type 0 225 5 3 1338 300 265 0 0 chr13 98704268 98704336 -21579976 - RMER30 DNA MER1_type -2 200 133 3 1338 277 310 28 0 chr13 98704273 98704344 -21579968 + Charlie12 DNA MER1_type 7 79 -2794 3 1338 3566 35 16 5 chr13 98705534 98705960 -21578352 + L1_Mus1 LINE L1 6137 6567 0 3 1338 225 188 0 0 chr13 98711447 98711495 -21572817 + A-rich Low_complexity Low_complexity 1 48 0 3 1338 211 309 62 21 chr13 98711564 98711660 -21572652 + B1_Mus1 SINE Alu 10 109 -39 3 1338 241 288 102 0 chr13 98711898 98711957 -21572355 + PB1D10 SINE Alu 1 65 -52 3 1338 252 217 0 0 chr13 98712013 98712073 -21572239 + ID4_ SINE ID 2 61 -22 3 1338 576 283 31 46 chr13 98712603 98712799 -21571513 - RMER30 DNA MER1_type 0 202 10 3 1338 614 311 10 20 chr13 98712916 98713113 -21571199 - ID_B1 SINE B4 -27 197 3 3 1338 185 0 40 0 chr13 98715798 98715823 -21568489 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1338 291 54 0 0 chr13 98715944 98715981 -21568331 + (CCA)n Simple_repeat Simple_repeat 1 37 0 3 1338 205 241 17 0 chr13 98716331 98716389 -21567923 - L2c LINE L2 -52 3335 3277 3 1338 663 301 0 6 chr13 98717212 98717376 -21566936 + B3A SINE B2 1 163 -35 3 1338 22 35 0 0 chr13 98717388 98717417 -21566895 + AT_rich Low_complexity Low_complexity 1 29 0 3 1338 1262 41 0 0 chr13 98718543 98718690 -21565622 + B1_Mus1 SINE Alu 2 148 0 3 1338 236 333 58 75 chr13 98718951 98719246 -21565066 + MER102b DNA MER1_type 1 290 -51 3 1338 896 219 16 5 chr13 98719592 98719768 -21564544 + B3A SINE B2 1 178 -20 3 1338 390 21 0 0 chr13 98719768 98719815 -21564497 + (CCA)n Simple_repeat Simple_repeat 1 47 0 3 1338 251 324 14 0 chr13 98721016 98721090 -21563222 + ID4 SINE ID 7 81 -2 3 1338 462 250 0 0 chr13 98721946 98722042 -21562270 + PB1D10 SINE Alu 11 106 -11 3 1338 1064 88 7 13 chr13 98722142 98722291 -21562021 + B1_Mur4 SINE Alu 2 149 -1 3 1338 303 145 0 0 chr13 98723126 98723195 -21561117 + (T)n Simple_repeat Simple_repeat 1 69 0 3 1338 1211 21 14 14 chr13 98723195 98723341 -21560971 - B1_Mm SINE Alu 0 147 2 3 1338 449 253 160 27 chr13 98724176 98724363 -21559949 + MTEa LTR MaLR 5 216 -163 3 1338 278 132 19 0 chr13 98724367 98724420 -21559892 + CT-rich Low_complexity Low_complexity 1 54 0 3 1338 678 220 81 6 chr13 98724420 98724580 -21559732 + MTEa LTR MaLR 201 372 -7 3 1338 486 83 0 0 chr13 98724592 98724664 -21559648 + (TCTA)n Simple_repeat Simple_repeat 4 75 0 3 1338 30 59 0 0 chr13 98724667 98724718 -21559594 + AT_rich Low_complexity Low_complexity 1 51 0 3 1338 262 180 170 9 chr13 98724896 98725008 -21559304 - ORSL DNA Tip100 -75 200 71 3 1338 988 218 10 10 chr13 98728547 98728751 -21555561 + B3 SINE B2 1 204 -12 3 1338 489 290 108 30 chr13 98729099 98729394 -21554918 + L1MD1 LINE L1 5701 6018 -224 3 1338 228 100 0 0 chr13 98730613 98730653 -21553659 + (TC)n Simple_repeat Simple_repeat 1 40 0 3 1338 1020 225 9 5 chr13 98730980 98731194 -21553118 + B3 SINE B2 2 216 0 3 1338 250 186 42 42 chr13 98732248 98732366 -21551946 + (TA)n Simple_repeat Simple_repeat 2 119 0 3 1338 314 214 12 0 chr13 98732391 98732475 -21551837 + L1MB7 LINE L1 5313 5397 -749 3 1338 226 231 30 15 chr13 98732548 98732614 -21551698 + C-rich Low_complexity Low_complexity 4 70 0 3 1338 514 269 69 37 chr13 98732618 98732834 -21551478 + L1MB7 LINE L1 5395 5617 -561 3 1338 251 167 0 18 chr13 98732844 98732899 -21551413 + L1MB7 LINE L1 5725 5778 -396 3 1338 512 288 54 34 chr13 98733010 98733215 -21551097 + L1MB7 LINE L1 5956 6164 -20 3 1338 1535 210 110 67 chr13 98734521 98734705 -21549607 + RLTR20A LTR ERVK 1 182 -359 3 1338 462 36 0 0 chr13 98734705 98734761 -21549551 + (GGGA)n Simple_repeat Simple_repeat 1 56 0 3 1338 1535 210 110 67 chr13 98734761 98735006 -21549306 + RLTR20A LTR ERVK 183 413 -128 3 1338 414 0 0 0 chr13 98735006 98735052 -21549260 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1338 1535 222 88 96 chr13 98735052 98735196 -21549116 + RLTR20A LTR ERVK 407 534 0 3 1338 221 353 42 25 chr13 98735214 98735333 -21548979 - MIRb SINE MIR -143 125 5 3 1338 423 0 0 0 chr13 98735992 98736039 -21548273 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1338 611 315 78 39 chr13 98736601 98736882 -21547430 + B4A SINE B4 1 292 0 3 1338 217 274 16 0 chr13 98736885 98736947 -21547365 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 3 1338 236 311 58 15 chr13 98739924 98740061 -21544251 + MER5A DNA MER1_type 47 189 0 3 1338 701 262 12 0 chr13 98740776 98740944 -21543368 + B3A SINE B2 1 170 -28 3 1338 684 140 33 14 chr13 98741316 98741526 -21542786 + GA-rich Low_complexity Low_complexity 1 213 0 3 1338 7294 137 6 6 chr13 98741642 98743395 -21540917 + Lx LINE L1 4900 6654 0 3 1338 569 272 25 40 chr13 98743913 98744112 -21540200 - B3A SINE B2 0 198 3 3 1338 598 252 0 58 chr13 98744144 98744300 -21540012 + ID_B1 SINE B4 77 223 -1 3 1338 520 116 0 21 chr13 98744300 98744397 -21539915 + (GGAA)n Simple_repeat Simple_repeat 1 95 0 3 1338 265 296 129 23 chr13 98745601 98745864 -21538448 + Lx9 LINE L1 7316 7606 -38 3 1338 23 0 0 0 chr13 98746088 98746111 -21538201 + AT_rich Low_complexity Low_complexity 1 23 0 3 1338 1318 226 114 3 chr13 98746618 98746968 -21537344 + MTD LTR MaLR 1 389 -30 3 1338 252 0 0 0 chr13 98750054 98750082 -21534230 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1338 432 0 0 0 chr13 98750278 98750326 -21533986 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1338 22 56 0 0 chr13 98750436 98750472 -21533840 + AT_rich Low_complexity Low_complexity 1 36 0 3 1338 213 240 0 0 chr13 98751382 98751432 -21532880 + A-rich Low_complexity Low_complexity 1 50 0 3 1338 274 72 53 18 chr13 98751546 98751603 -21532709 + (TGGGGG)n Simple_repeat Simple_repeat 2 60 0 3 1338 25 0 0 0 chr13 98752579 98752604 -21531708 + AT_rich Low_complexity Low_complexity 1 25 0 3 1338 242 229 217 0 chr13 98752683 98752766 -21531546 + B3A SINE B2 1 101 -97 3 1338 30 0 0 0 chr13 98752794 98752824 -21531488 + AT_rich Low_complexity Low_complexity 1 30 0 3 1338 1049 200 37 0 chr13 98752825 98753015 -21531297 + B3 SINE B2 7 203 -13 3 1338 602 177 0 8 chr13 98753015 98753140 -21531172 + (CATA)n Simple_repeat Simple_repeat 1 124 0 3 1338 378 0 0 0 chr13 98753543 98753585 -21530727 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1338 276 178 0 99 chr13 98755460 98755541 -21528771 - ID4_ SINE ID -10 73 1 3 1338 1170 41 0 33 chr13 98755958 98756102 -21528210 + B1_Mus1 SINE Alu 2 142 -6 3 1338 246 32 0 0 chr13 98756102 98756133 -21528179 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1338 237 65 0 0 chr13 98757698 98757729 -21526583 + (TCG)n Simple_repeat Simple_repeat 1 31 0 3 1338 270 0 0 0 chr13 98758329 98758359 -21525953 + (CAGA)n Simple_repeat Simple_repeat 1 30 0 3 1338 453 304 0 58 chr13 98758525 98758696 -21525616 - RSINE1 SINE B4 -1 164 4 3 1338 1454 97 116 34 chr13 98760693 98760800 -21523512 - Lx LINE L1 -15 6639 6535 3 1338 180 0 0 0 chr13 98760800 98760820 -21523492 + (CCCA)n Simple_repeat Simple_repeat 2 21 0 3 1338 1454 97 116 34 chr13 98760820 98760980 -21523332 - Lx LINE L1 -120 6534 6352 3 1338 277 286 0 0 chr13 98762183 98762246 -21522066 - PB1D10 SINE Alu -24 93 31 3 1338 307 276 55 31 chr13 98763352 98763479 -21520833 - L1ME3B LINE L1 -344 5896 5767 3 1338 419 277 122 0 chr13 98764272 98764420 -21519892 + B4A SINE B4 2 167 -125 3 1338 22 0 0 0 chr13 98764784 98764806 -21519506 + AT_rich Low_complexity Low_complexity 1 22 0 3 1338 345 272 0 0 chr13 98764838 98764930 -21519382 + L1M2 LINE L1 4442 4533 -1610 3 1338 189 0 0 0 chr13 98764997 98765018 -21519294 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1338 238 225 12 12 chr13 98765027 98765108 -21519204 + GA-rich Low_complexity Low_complexity 5 85 0 3 1338 864 279 73 19 chr13 98765154 98765526 -21518786 + L1M2 LINE L1 5327 5718 -594 3 1338 29 0 0 0 chr13 98766118 98766147 -21518165 + AT_rich Low_complexity Low_complexity 1 29 0 3 1338 324 48 0 0 chr13 98766475 98766517 -21517795 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1338 806 135 56 7 chr13 98767894 98768036 -21516276 + B1_Mur1 SINE Alu 1 149 0 3 1338 1134 70 21 0 chr13 98768224 98768367 -21515945 + B1_Mus2 SINE Alu 2 147 0 3 1338 446 235 136 18 chr13 98769024 98769193 -21515119 - B3 SINE B2 -21 195 7 3 1338 986 173 11 188 chr13 98769848 98770119 -21514193 + URR1A DNA MER1_type 1 223 -3 3 1338 550 284 35 45 chr13 98770470 98770669 -21513643 + B4 SINE B4 11 207 -85 3 1338 253 278 0 0 chr13 98770773 98770827 -21513485 + (CA)n Simple_repeat Simple_repeat 2 55 0 3 1338 308 200 0 41 chr13 98770827 98770900 -21513412 + HAL1-3A_ME LINE L1 1976 2045 -813 3 1338 370 186 154 46 chr13 98771331 98771461 -21512851 + RSINE1 SINE B4 20 163 -2 3 1338 669 141 8 62 chr13 98771510 98771639 -21512673 + ID_B1 SINE B4 103 224 0 3 1338 189 0 0 0 chr13 98772072 98772093 -21512219 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 3 1338 483 130 0 0 chr13 98772468 98772545 -21511767 + (TTCC)n Simple_repeat Simple_repeat 3 79 0 3 1338 235 325 65 15 chr13 98772756 98772959 -21511353 + L2a LINE L2 3161 3426 0 3 1338 500 243 0 9 chr13 98773459 98773567 -21510745 + PB1D10 SINE Alu 5 111 -6 3 1338 528 30 0 0 chr13 98774289 98774355 -21509957 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1338 324 246 0 0 chr13 98775423 98775488 -21508824 + ID4 SINE ID 3 67 -16 3 1338 345 162 0 0 chr13 98777000 98777068 -21507244 + (TGAA)n Simple_repeat Simple_repeat 1 68 0 3 1338 192 40 0 0 chr13 98779026 98779051 -21505261 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 4 1338 298 224 28 69 chr13 98779052 98779124 -21505188 - ID4_ SINE ID -10 73 5 4 1338 322 211 0 0 chr13 98779217 98779293 -21505019 - ORR1B1 LTR MaLR -252 142 67 4 1338 332 77 0 19 chr13 98779675 98779728 -21504584 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1338 320 250 42 42 chr13 98779930 98780026 -21504286 + PB1 SINE Alu 7 102 -25 4 1338 822 170 7 7 chr13 98780200 98780354 -21503958 - ORR1B2 LTR MaLR -7 360 207 4 1338 216 327 67 11 chr13 98780688 98780813 -21503499 + MIR SINE MIR 49 188 -80 4 1338 23 0 0 0 chr13 98781449 98781472 -21502840 + AT_rich Low_complexity Low_complexity 1 23 0 4 1338 666 258 60 72 chr13 98782500 98782751 -21501561 + B4 SINE B4 44 291 -1 4 1338 487 25 49 12 chr13 98782761 98782843 -21501469 + (CA)n Simple_repeat Simple_repeat 1 85 0 4 1338 1381 69 6 0 chr13 98782934 98783109 -21501203 + B2_Mm1a SINE B2 3 178 -15 4 1338 387 0 0 0 chr13 98783109 98783152 -21501160 + (GAAAA)n Simple_repeat Simple_repeat 5 47 0 4 1338 721 200 20 14 chr13 98783201 98783348 -21500964 + B1_Mur1 SINE Alu 2 149 0 4 1338 182 37 37 0 chr13 98784715 98784742 -21499570 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 4 1338 441 0 0 0 chr13 98785440 98785489 -21498823 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1338 561 30 0 0 chr13 98785489 98785555 -21498757 + (GA)n Simple_repeat Simple_repeat 2 68 0 4 1338 21 0 0 0 chr13 98786795 98786816 -21497496 + GC_rich Low_complexity Low_complexity 1 21 0 4 1338 432 0 0 0 chr13 98786821 98786869 -21497443 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1338 1103 62 0 46 chr13 98787692 98787844 -21496468 + B1_Mus2 SINE Alu 2 146 -1 4 1338 594 229 0 0 chr13 98787982 98788091 -21496221 + RSINE1 SINE B4 42 150 -15 4 1338 315 0 0 0 chr13 98788121 98788156 -21496156 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1338 630 261 165 0 chr13 98788332 98788508 -21495804 + ID_B1 SINE B4 8 212 -12 4 1338 406 222 144 0 chr13 98788864 98788954 -21495358 - ID_B1 SINE B4 -12 212 110 4 1338 258 176 0 0 chr13 98789061 98789112 -21495200 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1338 198 0 0 0 chr13 98789915 98789937 -21494375 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 1338 262 333 140 57 chr13 98790487 98790802 -21493510 + LTR31 LTR ERV1 153 493 -126 4 1338 1405 143 32 4 chr13 98790799 98791045 -21493267 + ORR1B2 LTR MaLR 115 367 0 4 1338 397 241 9 9 chr13 98791072 98791185 -21493127 - L1MC3 LINE L1 -1641 6144 6032 4 1338 1277 266 48 70 chr13 98791330 98791665 -21492647 + L1MC3 LINE L1 7027 7342 -443 4 1338 966 142 14 0 chr13 98791665 98791813 -21492499 - B1_Mur4 SINE Alu 0 150 1 4 1338 1277 266 48 70 chr13 98791813 98792016 -21492296 + L1MC3 LINE L1 7343 7553 -232 4 1338 3259 44 26 0 chr13 98792244 98792634 -21491678 + MTB LTR MaLR 1 400 0 4 1338 495 279 14 35 chr13 98794295 98794436 -21489876 + ID_B1 SINE B4 79 216 -8 4 1338 180 0 0 0 chr13 98794436 98794456 -21489856 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1338 1236 27 0 26 chr13 98794527 98794678 -21489634 + B1_Mus1 SINE Alu 2 148 0 4 1338 773 201 87 36 chr13 98794720 98794916 -21489396 + B3 SINE B2 1 206 -10 4 1338 599 249 125 40 chr13 98795168 98795344 -21488968 - B3 SINE B2 -25 191 1 4 1338 365 269 34 25 chr13 98796425 98796543 -21487769 + Charlie12 DNA MER1_type 41 159 -2714 4 1338 1011 90 7 0 chr13 98796948 98797093 -21487219 + B1_Mus1 SINE Alu 3 148 0 4 1338 201 108 0 0 chr13 98797447 98797484 -21486828 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 4 1338 2260 98 0 38 chr13 98798291 98798632 -21485680 + ORR1A4 LTR MaLR 2 329 0 4 1338 239 93 0 23 chr13 98799927 98799971 -21484341 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 4 1338 421 238 181 52 chr13 98801017 98801172 -21483140 + B3A SINE B2 24 198 0 4 1338 198 71 0 0 chr13 98801978 98802006 -21482306 + (TC)n Simple_repeat Simple_repeat 2 29 0 4 1338 272 255 13 39 chr13 98802020 98802130 -21482182 + Lx8 LINE L1 5838 5930 -370 4 1338 246 174 0 0 chr13 98802130 98802176 -21482136 + (TATG)n Simple_repeat Simple_repeat 3 48 0 4 1338 298 239 53 21 chr13 98803320 98803414 -21480898 + PB1D7 SINE Alu 12 108 -12 4 1338 759 252 95 18 chr13 98803995 98804217 -21480095 - RMER1B Other Other -793 273 35 4 1338 437 270 0 17 chr13 98804568 98804685 -21479627 + B3A SINE B2 1 115 -83 4 1338 519 317 53 22 chr13 98805085 98805311 -21479001 - B4 SINE B4 -58 234 2 4 1338 28 0 0 0 chr13 98805522 98805550 -21478762 + AT_rich Low_complexity Low_complexity 1 28 0 4 1338 840 290 47 50 chr13 98805998 98806422 -21477890 + BGLII_B LTR ERVK 1 423 -18 4 1338 304 313 0 25 chr13 98806938 98807056 -21477256 - L1M1 LINE L1 -694 5606 5492 4 1338 1290 269 106 63 chr13 98807058 98807473 -21476839 + Lx8 LINE L1 6805 7231 -242 4 1338 180 0 0 0 chr13 98807473 98807493 -21476819 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1338 216 0 0 0 chr13 98807493 98807516 -21476796 + (GA)n Simple_repeat Simple_repeat 2 25 0 4 1338 1290 269 106 63 chr13 98807516 98807713 -21476599 + Lx8 LINE L1 7232 7443 -30 4 1338 423 258 154 51 chr13 98807767 98808020 -21476292 - L1MA5 LINE L1 -62 6238 5960 4 1338 498 108 0 0 chr13 98808020 98808094 -21476218 + (TCC)n Simple_repeat Simple_repeat 3 76 0 4 1338 207 162 0 0 chr13 98808099 98808136 -21476176 + T-rich Low_complexity Low_complexity 1 37 0 4 1338 431 171 42 60 chr13 98808138 98808291 -21476021 - B1_Mur4 SINE Alu 0 148 9 4 1338 495 260 15 29 chr13 98809789 98809918 -21474394 + ID_B1 SINE B4 76 209 -83 4 1338 1489 119 126 118 chr13 98809994 98810375 -21473937 + ORR1C2 LTR MaLR 1 384 0 4 1338 186 43 0 0 chr13 98811239 98811262 -21473050 + (CCCCCA)n Simple_repeat Simple_repeat 1 23 0 4 1338 3166 70 2 2 chr13 98814547 98814947 -21469365 - MTB LTR MaLR 0 400 1 4 1338 830 269 26 22 chr13 98815150 98815390 -21468922 + MTD LTR MaLR 1 221 -175 4 1338 565 276 63 19 chr13 98815387 98815546 -21468766 + B3 SINE B2 48 213 -3 4 1338 726 241 98 0 chr13 98815562 98815765 -21468547 + MTD LTR MaLR 197 419 0 4 1338 8333 48 2 1 chr13 98816152 98817250 -21467062 - L1Md_F2 LINE L1 -1 6581 5486 4 1338 424 59 29 0 chr13 98817437 98817505 -21466807 + (TG)n Simple_repeat Simple_repeat 1 70 0 4 1338 421 250 65 24 chr13 98817512 98817635 -21466677 - RSINE1 SINE B4 -33 132 5 4 1338 1222 156 62 202 chr13 98817697 98818132 -21466180 + ORR1D1 LTR MaLR 1 374 0 4 1338 380 276 9 62 chr13 98818481 98818593 -21465719 - PB1D10 SINE Alu -11 106 1 4 1338 772 261 18 36 chr13 98818699 98818918 -21465394 + B3 SINE B2 1 215 -1 4 1338 359 286 0 12 chr13 98819196 98819281 -21465031 - B1F SINE Alu -65 84 1 4 1338 356 257 95 0 chr13 98820474 98820579 -21463733 + PB1D10 SINE Alu 3 117 0 4 1338 500 274 198 35 chr13 98821899 98822247 -21462065 + MER47B DNA MER2_type 14 418 0 4 1338 414 274 19 0 chr13 98824891 98824997 -21459315 + PB1 SINE Alu 1 108 -19 4 1338 462 36 0 0 chr13 98825000 98825056 -21459256 + (CA)n Simple_repeat Simple_repeat 2 57 0 4 1338 317 217 48 0 chr13 98825524 98825607 -21458705 + MER110A LTR ERV1 23 109 -359 4 1338 21 36 0 0 chr13 98826376 98826404 -21457908 + AT_rich Low_complexity Low_complexity 1 28 0 4 1338 546 91 0 0 chr13 98826532 98826609 -21457703 + (CA)n Simple_repeat Simple_repeat 1 77 0 4 1338 1130 279 55 14 chr13 98827661 98828007 -21456305 - MTEa LTR MaLR -16 363 4 4 167 3036 52 0 5 chr13 98828050 98828433 -21455879 - L1Md_F2 LINE L1 0 6582 6202 4 1339 396 330 51 129 chr13 98828505 98828877 -21455435 - MTE-int LTR MaLR -951 629 287 4 1339 913 252 116 4 chr13 98829140 98829399 -21454913 + ORR1D2 LTR MaLR 71 358 -12 4 1339 484 89 12 12 chr13 98829399 98829479 -21454833 + (GAAA)n Simple_repeat Simple_repeat 2 81 0 4 1339 227 280 0 0 chr13 98829551 98829601 -21454711 + RSINE1 SINE B4 44 93 -72 4 1339 243 0 0 0 chr13 98829647 98829674 -21454638 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 4 1339 473 58 14 0 chr13 98829698 98829767 -21454545 + (CA)n Simple_repeat Simple_repeat 2 71 0 4 1339 625 234 185 70 chr13 98830207 98830537 -21453775 + RLTR9A LTR ERVK 1 368 0 4 1339 537 307 6 16 chr13 98833058 98833240 -21451072 + Lx8 LINE L1 6949 7128 -345 4 1339 250 338 55 89 chr13 98833307 98833374 -21450938 + Lx8 LINE L1 7149 7206 -267 4 1339 4902 120 31 3 chr13 98833374 98834091 -21450221 + RMER19A LTR ERVK 1 737 0 4 1339 250 338 55 89 chr13 98834091 98834221 -21450091 + Lx8 LINE L1 7207 7342 -131 4 1339 690 75 0 0 chr13 98834221 98834314 -21449998 + (GGGAA)n Simple_repeat Simple_repeat 4 96 0 4 1339 250 338 55 89 chr13 98834314 98834352 -21449960 + Lx8 LINE L1 7343 7376 -97 4 1339 22 56 0 0 chr13 98834374 98834410 -21449902 + AT_rich Low_complexity Low_complexity 1 36 0 4 1339 1446 65 38 0 chr13 98834648 98834833 -21449479 + B2_Mm2 SINE B2 3 194 -1 4 1339 261 232 0 0 chr13 98835317 98835386 -21448926 + (CA)n Simple_repeat Simple_repeat 2 70 0 4 1339 22 35 0 0 chr13 98835479 98835508 -21448804 + AT_rich Low_complexity Low_complexity 1 29 0 4 1339 768 226 0 6 chr13 98835509 98835665 -21448647 - B3 SINE B2 -5 211 57 4 1339 1032 189 25 5 chr13 98836182 98836384 -21447928 - B3 SINE B2 -3 213 8 4 1339 567 0 0 0 chr13 98836903 98836966 -21447346 + (CAAAA)n Simple_repeat Simple_repeat 4 66 0 4 1339 1705 26 0 0 chr13 98838145 98838337 -21445975 - B2_Mm1a SINE B2 0 193 2 4 1339 3171 111 10 35 chr13 98838518 98839002 -21445310 + MT2C_Mm LTR ERVL 1 472 -3 4 1339 2086 174 48 2 chr13 98839133 98839530 -21444782 + MTC LTR MaLR 7 421 0 5 1339 189 0 0 0 chr13 98840265 98840286 -21444026 + (CTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1339 2957 208 85 28 chr13 98840286 98840992 -21443320 - RMER1C Other Other -5 1337 592 5 1339 553 225 184 41 chr13 98841285 98841464 -21442848 + L1MA6 LINE L1 5574 5785 -515 5 1339 1181 50 0 0 chr13 98841464 98841605 -21442707 + B1_Mus1 SINE Alu 2 142 -6 5 1339 642 26 0 0 chr13 98841607 98841683 -21442629 + (GAAA)n Simple_repeat Simple_repeat 2 77 0 5 1339 553 248 285 15 chr13 98841683 98842051 -21442261 + L1MA6 LINE L1 5786 6250 -50 5 1339 562 189 80 36 chr13 98843337 98843474 -21440838 + RSINE1 SINE B4 2 144 -21 5 1339 252 228 73 66 chr13 98843671 98843807 -21440505 + L1MA5 LINE L1 6159 6295 -5 5 1339 321 264 34 22 chr13 98843807 98843896 -21440416 - B1F1 SINE Alu -4 145 56 5 1339 310 238 16 16 chr13 98843998 98844200 -21440112 + (TG)n Simple_repeat Simple_repeat 1 202 0 5 1339 860 265 79 32 chr13 98844218 98844495 -21439817 - B4A SINE B4 0 292 3 5 1339 672 157 59 15 chr13 98846565 98846701 -21437611 - B1_Mur4 SINE Alu -7 143 2 5 1339 228 219 41 20 chr13 98847661 98847759 -21436553 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 5 1339 233 222 0 0 chr13 98847929 98847991 -21436321 + (CATATA)n Simple_repeat Simple_repeat 1 62 0 5 1339 598 200 225 39 chr13 98849988 98850170 -21434142 + B3 SINE B2 1 216 0 5 1339 3625 112 17 0 chr13 98850527 98851052 -21433260 + Lx LINE L1 6115 6648 -6 5 1339 269 26 26 0 chr13 98851062 98851100 -21433212 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 5 1339 803 249 57 73 chr13 98852227 98852268 -21432044 + B4 SINE B4 42 96 -196 5 1339 398 20 20 0 chr13 98852268 98852319 -21431993 + (CAAAA)n Simple_repeat Simple_repeat 2 53 0 5 1339 803 249 57 73 chr13 98852319 98852524 -21431788 + B4 SINE B4 97 283 -9 5 1339 822 116 0 0 chr13 98852532 98852670 -21431642 + (CA)n Simple_repeat Simple_repeat 1 138 0 5 1339 2156 132 63 42 chr13 98852670 98853127 -21431185 + IAPLTR2_Mm LTR ERVK 1 467 -8 5 1339 58978 10 3 14 chr13 98853128 98859686 -21424626 + IAPEz-int LTR ERVK 1 6481 0 5 1339 2156 132 63 42 chr13 98859686 98860143 -21424169 + IAPLTR2_Mm LTR ERVK 1 467 -8 5 1339 552 125 0 0 chr13 98860150 98860246 -21424066 + (CA)n Simple_repeat Simple_repeat 2 97 0 5 1339 3999 55 0 26 chr13 98860264 98860937 -21423375 - L1_Mus1 LINE L1 -488 6079 5420 5 1339 3833 65 4 0 chr13 98860937 98861413 -21422899 + L1_Mus1 LINE L1 6090 6567 0 5 1339 306 204 0 0 chr13 98862557 98862611 -21421701 - ID4 SINE ID -9 74 21 5 1339 500 323 0 0 chr13 98862793 98862920 -21421392 + B1F1 SINE Alu 1 127 -22 5 1339 276 30 0 0 chr13 98862933 98862966 -21421346 + (GA)n Simple_repeat Simple_repeat 1 33 0 5 1339 343 336 56 22 chr13 98863243 98863474 -21420838 + L3 LINE CR1 4038 4276 -213 5 1339 407 243 283 0 chr13 98864760 98864912 -21419400 + ID_B1 SINE B4 27 221 -3 5 1339 240 35 0 0 chr13 98865697 98865726 -21418586 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1339 200 163 0 23 chr13 98866172 98866216 -21418096 + C-rich Low_complexity Low_complexity 4 46 0 5 1339 207 306 256 7 chr13 98866728 98867035 -21417277 - L2b LINE L2 -242 3133 2752 5 1339 440 271 15 8 chr13 98867805 98867935 -21416377 + L1MC1 LINE L1 5888 6018 -315 5 1339 1247 253 88 3 chr13 98867939 98868280 -21416032 - MTEa LTR MaLR -8 371 2 5 1339 867 238 76 44 chr13 98868295 98868546 -21415766 + L1MC1 LINE L1 6061 6319 -14 5 1339 282 322 196 17 chr13 98868925 98869165 -21415147 - MLT1J2 LTR MaLR -127 321 39 5 1339 540 289 173 4 chr13 98869442 98869696 -21414616 - MTEa LTR MaLR -81 298 2 5 1339 1163 166 55 0 chr13 98870939 98871138 -21413174 + B3 SINE B2 4 213 -3 5 1339 182 231 19 37 chr13 98871345 98871399 -21412913 - MIRc SINE MIR -113 155 103 5 1339 247 333 33 25 chr13 98872049 98872169 -21412143 - MIR SINE MIR -82 180 60 5 1339 691 269 39 30 chr13 98872803 98872919 -21411393 - ID_B1 SINE B4 -19 205 91 5 1339 4611 95 17 39 chr13 98872919 98873687 -21410625 + RMER17A LTR ERVK 1 751 0 5 1339 691 269 39 30 chr13 98873687 98873773 -21410539 - ID_B1 SINE B4 -134 90 1 5 1339 319 214 78 11 chr13 98873810 98873887 -21410425 + PB1D9 SINE Alu 24 107 -13 5 1339 1178 67 0 32 chr13 98873887 98874073 -21410239 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 5 1339 319 214 78 11 chr13 98874073 98874085 -21410227 + PB1D9 SINE Alu 108 119 -1 5 1339 888 61 0 0 chr13 98874098 98874213 -21410099 + (GAGAA)n Simple_repeat Simple_repeat 1 115 0 5 1339 633 251 217 15 chr13 98875126 98875393 -21408919 - MTD LTR MaLR 0 419 99 5 1339 303 91 45 0 chr13 98875429 98875473 -21408839 - ETnERV3-int LTR ERVK -5760 48 3 5 1339 5196 153 38 18 chr13 98875475 98876351 -21407961 - RLTR13B1 LTR ERVK 0 893 1 5 1339 479 160 35 0 chr13 98876353 98876451 -21407861 - RMER4B LTR ERVK -134 477 343 5 1339 283 137 137 0 chr13 98876458 98876625 -21407687 + (CAAG)n Simple_repeat Simple_repeat 1 189 0 5 1339 225 233 138 130 chr13 98877066 98877204 -21407108 - ORR1D2 LTR MaLR -5 354 216 5 1339 526 223 33 0 chr13 98877225 98877346 -21406966 - ORR1D2 LTR MaLR -245 125 1 5 1339 617 223 101 7 chr13 98877351 98877500 -21406812 + B3 SINE B2 47 209 -7 5 1339 24 32 0 0 chr13 98877505 98877536 -21406776 + AT_rich Low_complexity Low_complexity 1 31 0 5 1339 250 24 71 0 chr13 98877895 98877937 -21406375 + (TTTTTG)n Simple_repeat Simple_repeat 2 46 0 5 1339 1165 75 0 0 chr13 98877952 98878098 -21406214 - B1_Mus2 SINE Alu 0 147 2 5 1339 322 0 83 0 chr13 98878399 98878447 -21405865 + (TTTA)n Simple_repeat Simple_repeat 3 54 0 5 1339 1124 100 0 0 chr13 98878449 98878609 -21405703 - B2_Mm2 SINE B2 -35 160 1 5 1339 452 207 0 11 chr13 98878665 98878753 -21405559 + B3 SINE B2 1 87 -129 5 1339 978 117 0 0 chr13 98878797 98878976 -21405336 + (TG)n Simple_repeat Simple_repeat 2 180 0 5 1339 450 292 8 32 chr13 98879103 98879227 -21405085 + B3 SINE B2 95 215 -1 5 1339 419 271 57 44 chr13 98879333 98879491 -21404821 - B3A SINE B2 -37 161 2 5 1339 198 0 0 0 chr13 98880128 98880150 -21404162 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 1339 879 140 28 7 chr13 98880150 98880283 -21404029 - B1_Mur3 SINE Alu -10 139 3 5 1339 1154 153 19 9 chr13 98880638 98880849 -21403463 - URR1B DNA MER1_type 0 225 13 5 1339 270 0 0 0 chr13 98880892 98880922 -21403390 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1339 324 318 51 58 chr13 98881353 98881490 -21402822 + ID_B1 SINE B4 82 217 -7 5 1339 816 257 113 12 chr13 98881613 98881869 -21402443 + B4A SINE B4 1 282 -10 5 1339 351 0 0 0 chr13 98881880 98881919 -21402393 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1339 747 195 6 28 chr13 98882289 98882650 -21401662 + (TATG)n Simple_repeat Simple_repeat 1 352 0 5 1339 701 85 9 0 chr13 98883380 98883486 -21400826 + (TG)n Simple_repeat Simple_repeat 2 108 0 5 1339 660 328 33 58 chr13 98884396 98884523 -21399789 + Lx8 LINE L1 7113 7244 -229 5 1339 246 32 0 0 chr13 98884523 98884554 -21399758 + (ATTG)n Simple_repeat Simple_repeat 1 31 0 5 1339 660 328 33 58 chr13 98884554 98884789 -21399523 + Lx8 LINE L1 7245 7465 -8 5 1339 254 220 0 0 chr13 98885707 98885757 -21398555 - URR1B DNA MER1_type 0 225 176 5 1339 1625 232 148 28 chr13 98885757 98885869 -21398443 - RLTR26 LTR ERVK 0 642 529 5 1339 196 30 0 57 chr13 98885869 98885904 -21398408 + (CTG)n Simple_repeat Simple_repeat 2 34 0 5 1339 1625 232 148 28 chr13 98885904 98886364 -21397948 - RLTR26 LTR ERVK -114 528 2 5 1339 520 154 113 0 chr13 98886364 98886503 -21397809 - URR1B DNA MER1_type -46 179 1 5 1339 311 260 52 10 chr13 98888053 98888150 -21396162 - BC1_Mm scRNA scRNA -51 101 1 5 1339 529 267 93 0 chr13 98888772 98888933 -21395379 + MER2 DNA MER2_type 3 178 -167 5 1339 409 241 66 29 chr13 98888937 98889074 -21395238 + B1_Mur2 SINE Alu 2 143 -6 5 1339 246 203 0 34 chr13 98889079 98889138 -21395174 + ID4_ SINE ID 9 65 -87 5 1339 594 0 0 0 chr13 98889149 98889215 -21395097 + (GA)n Simple_repeat Simple_repeat 1 66 0 5 1339 1610 166 105 12 chr13 98889480 98889822 -21394490 + ORR1D1 LTR MaLR 1 374 0 5 1339 266 0 29 0 chr13 98893348 98893382 -21390930 + (CAA)n Simple_repeat Simple_repeat 2 36 0 5 1339 280 12 10 146 chr13 98893509 98893551 -21390761 + A-rich Low_complexity Low_complexity 2 35 0 5 1339 1105 76 0 7 chr13 98893551 98893697 -21390615 + B1_Mus1 SINE Alu 4 148 0 5 1339 280 12 10 146 chr13 98893697 98893750 -21390562 + A-rich Low_complexity Low_complexity 36 84 0 5 1339 773 177 14 0 chr13 98893756 98893903 -21390409 - RLTR40 LTR ERVK -668 149 1 5 1339 227 200 19 57 chr13 98893903 98893956 -21390356 + L1MD LINE L1 4876 4926 -1220 5 1339 315 250 208 0 chr13 98894192 98894312 -21390000 + RSINE1 SINE B4 5 149 -16 5 1339 24 32 0 0 chr13 98895127 98895158 -21389154 + AT_rich Low_complexity Low_complexity 1 31 0 5 1339 861 90 160 6 chr13 98895169 98895325 -21388987 - B2_Mm2 SINE B2 -14 181 2 5 1339 303 191 0 0 chr13 98895535 98895603 -21388709 + G-rich Low_complexity Low_complexity 3 70 0 5 1339 648 307 36 36 chr13 98896362 98896642 -21387670 + B4 SINE B4 8 287 -5 5 1339 207 0 0 0 chr13 98896644 98896667 -21387645 + (CA)n Simple_repeat Simple_repeat 2 24 0 5 1339 474 151 0 0 chr13 98896667 98896773 -21387539 + GA-rich Low_complexity Low_complexity 1 106 0 5 1339 223 141 27 27 chr13 98896893 98896966 -21387346 + (CAGAGA)n Simple_repeat Simple_repeat 4 76 0 5 1339 351 264 20 41 chr13 98897182 98897328 -21386984 - L1MA6 LINE L1 -43 6257 6115 5 1339 733 273 93 47 chr13 98897365 98897730 -21386582 - L1MA6 LINE L1 -265 6035 5654 5 1339 779 226 0 89 chr13 98897824 98898004 -21386308 + RSINE1 SINE B4 2 165 0 5 1339 24 32 0 0 chr13 98898018 98898049 -21386263 + AT_rich Low_complexity Low_complexity 1 31 0 5 1339 192 77 0 0 chr13 98898722 98898748 -21385564 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 5 1339 571 297 48 51 chr13 98899273 98899595 -21384717 + L1MB3 LINE L1 5382 5704 -476 5 1339 426 263 45 101 chr13 98899592 98899616 -21384696 + L1MB3 LINE L1 5935 5958 -225 5 1339 450 0 0 0 chr13 98899616 98899666 -21384646 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1339 426 263 45 101 chr13 98899666 98899840 -21384472 + L1MB3 LINE L1 5959 6122 -61 5 1339 496 283 83 70 chr13 98899857 98900085 -21384227 + B4A SINE B4 1 231 -61 5 1339 476 357 37 70 chr13 98900276 98900704 -21383608 + L1MD1 LINE L1 5502 5915 -327 5 1339 559 229 76 8 chr13 98900764 98900896 -21383416 + B1_Mur1 SINE Alu 1 141 -8 5 1339 441 0 0 0 chr13 98902474 98902523 -21381789 + (A)n Simple_repeat Simple_repeat 1 49 0 6 1339 315 210 24 40 chr13 98902532 98902656 -21381656 + CT-rich Low_complexity Low_complexity 4 125 0 6 1339 284 329 83 28 chr13 98903498 98903642 -21380670 + Arthur1B DNA Tip100 130 281 -944 6 1339 576 219 131 27 chr13 98904056 98904239 -21380073 + B3 SINE B2 1 202 -14 6 1339 972 109 76 35 chr13 98904260 98904431 -21379881 - B2_Mm2 SINE B2 -17 178 1 6 1339 750 78 0 0 chr13 98904944 98905046 -21379266 + (CA)n Simple_repeat Simple_repeat 1 102 0 6 1339 201 74 0 0 chr13 98905047 98905074 -21379238 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1339 200 337 83 35 chr13 98905318 98905487 -21378825 - L2b LINE L2 -225 3150 2974 6 1339 370 177 92 0 chr13 98908397 98908561 -21375751 + (TA)n Simple_repeat Simple_repeat 1 179 0 6 1339 364 166 33 71 chr13 98908477 98908659 -21375653 + (TTATA)n Simple_repeat Simple_repeat 1 175 0 6 1339 1164 41 7 7 chr13 98909646 98909793 -21374519 + B1_Mus2 SINE Alu 1 147 0 6 1339 279 146 0 0 chr13 98909795 98909850 -21374462 + (A)n Simple_repeat Simple_repeat 1 55 0 6 1339 25 0 0 0 chr13 98911814 98911839 -21372473 + AT_rich Low_complexity Low_complexity 1 25 0 6 1339 21 0 0 0 chr13 98911901 98911922 -21372390 + AT_rich Low_complexity Low_complexity 1 21 0 6 1339 24 0 0 0 chr13 98912256 98912280 -21372032 + AT_rich Low_complexity Low_complexity 1 24 0 6 1339 655 302 86 31 chr13 98912333 98912589 -21371723 - MER2 DNA MER2_type 0 345 76 6 1339 899 142 0 6 chr13 98913430 98913607 -21370705 + (GGGA)n Simple_repeat Simple_repeat 3 178 0 6 1339 249 33 0 0 chr13 98913607 98913637 -21370675 + (CAGG)n Simple_repeat Simple_repeat 1 30 0 6 1339 2590 165 24 11 chr13 98913658 98914187 -21370125 + Lx4B LINE L1 6383 6927 -73 6 1339 23 0 0 0 chr13 98914750 98914773 -21369539 + AT_rich Low_complexity Low_complexity 1 23 0 6 1339 258 156 0 0 chr13 98915082 98915146 -21369166 + A-rich Low_complexity Low_complexity 1 64 0 6 1339 708 266 161 58 chr13 98915833 98916380 -21367932 + L1MB3 LINE L1 5572 6174 -9 6 1339 428 300 37 16 chr13 98916792 98916981 -21367331 + L1MB3 LINE L1 5730 5919 -264 6 1339 192 77 0 0 chr13 98917171 98917197 -21367115 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1339 748 201 7 7 chr13 98917953 98918098 -21366214 - B1_Mus1 SINE Alu -2 146 2 6 1339 413 139 56 0 chr13 98918501 98918573 -21365739 - RLTR18B LTR ERVK -436 76 1 6 1339 491 168 115 45 chr13 98918655 98918811 -21365501 + Lx9 LINE L1 7477 7643 -1 6 1339 261 308 0 0 chr13 98918896 98918961 -21365351 - ID4 SINE ID -16 67 3 6 1339 267 275 63 18 chr13 98918961 98919072 -21365240 - PB1D10 SINE Alu -1 116 1 6 1339 238 240 0 39 chr13 98919107 98919185 -21365127 + Lx8 LINE L1 7395 7469 -4 6 1339 2427 179 90 17 chr13 98919186 98919663 -21364649 - RLTR18B LTR ERVK 0 512 1 6 1339 195 42 0 0 chr13 98919794 98919818 -21364494 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 6 1339 747 309 22 33 chr13 98919870 98920141 -21364171 - B4A SINE B4 -22 270 3 6 1339 323 296 90 51 chr13 98920183 98920439 -21363873 + Charlie7 DNA MER1_type 1391 1656 -956 6 1339 1477 279 102 70 chr13 98920630 98920905 -21363407 + Lx9 LINE L1 5810 6106 -1538 6 1339 204 40 0 0 chr13 98920905 98920930 -21363382 + (TAA)n Simple_repeat Simple_repeat 3 27 0 6 1339 1477 279 102 70 chr13 98920930 98921559 -21362753 + Lx9 LINE L1 6107 6743 -901 6 1339 596 192 47 16 chr13 98921554 98921681 -21362631 + Lx9 LINE L1 6855 6985 -659 6 1339 500 118 279 32 chr13 98921678 98921713 -21362599 + Lx9 LINE L1 7441 7484 -160 6 1339 390 42 0 0 chr13 98921713 98921761 -21362551 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1339 500 118 279 32 chr13 98921761 98921883 -21362429 + Lx9 LINE L1 7485 7637 -7 6 1339 303 294 129 64 chr13 98921946 98922179 -21362133 + Charlie7 DNA MER1_type 1881 2128 -484 6 1339 241 359 100 61 chr13 98923391 98923652 -21360660 - B4 SINE B4 -20 272 2 6 1339 8415 36 4 2 chr13 98924311 98925304 -21359008 + L1Md_T LINE L1 5587 6581 -1 6 1339 189 0 0 0 chr13 98925480 98925501 -21358811 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6 1339 703 209 39 0 chr13 98925501 98925630 -21358682 - B1_Mur2 SINE Alu -11 138 5 6 1339 342 0 0 0 chr13 98926332 98926370 -21357942 + (GA)n Simple_repeat Simple_repeat 2 39 0 6 1339 571 263 212 17 chr13 98927439 98927679 -21356633 + B4A SINE B4 1 287 -5 6 1339 360 242 0 0 chr13 98927683 98927778 -21356534 + (CATA)n Simple_repeat Simple_repeat 4 98 0 6 1339 379 280 40 0 chr13 98928373 98928498 -21355814 + Charlie4z DNA MER1_type 1 130 -37 6 1339 1154 92 85 11 chr13 98928535 98928711 -21355601 + B2_Mm2 SINE B2 2 190 -5 6 1339 357 274 150 30 chr13 98928828 98929114 -21355198 + L1MD2 LINE L1 5303 5616 -564 6 1339 512 295 54 15 chr13 98929327 98929530 -21354782 + MER2 DNA MER2_type 133 343 -2 6 1339 340 384 49 34 chr13 98929798 98930065 -21354247 + L1MD2 LINE L1 5861 6131 -228 6 1339 735 253 88 0 chr13 98930172 98930366 -21353946 - B3 SINE B2 -5 211 1 6 1339 417 66 0 62 chr13 98930400 98930497 -21353815 + (TG)n Simple_repeat Simple_repeat 1 91 0 6 1339 522 255 54 0 chr13 98930501 98930650 -21353662 - B3A SINE B2 -38 160 4 6 1339 318 306 43 7 chr13 98930652 98930790 -21353522 + L1MD1 LINE L1 6099 6241 -1 6 1339 1272 34 0 0 chr13 98930917 98931065 -21353247 - B1_Mus1 SINE Alu 0 148 1 6 1339 551 246 160 23 chr13 98931182 98931357 -21352955 + B3 SINE B2 1 199 -17 6 1339 489 71 0 0 chr13 98934215 98934285 -21350027 + (TG)n Simple_repeat Simple_repeat 1 70 0 6 1339 968 220 19 5 chr13 98935602 98935812 -21348500 - B3 SINE B2 -1 215 3 6 1339 356 59 20 0 chr13 98936035 98936086 -21348226 + (GA)n Simple_repeat Simple_repeat 2 53 0 6 1339 21 57 0 0 chr13 98936393 98936428 -21347884 + AT_rich Low_complexity Low_complexity 1 35 0 6 1339 186 241 0 0 chr13 98936571 98936658 -21347654 + C-rich Low_complexity Low_complexity 6 92 0 6 1339 288 70 0 0 chr13 98937120 98937163 -21347149 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 6 1339 690 189 0 0 chr13 98937167 98937347 -21346965 + GA-rich Low_complexity Low_complexity 1 180 0 6 1339 1363 239 12 44 chr13 98937911 98938230 -21346082 - MTD LTR MaLR -53 366 58 6 1339 321 93 0 0 chr13 98938382 98938436 -21345876 + (A)n Simple_repeat Simple_repeat 1 54 0 6 1339 267 283 33 0 chr13 98938719 98938811 -21345501 + PB1D9 SINE Alu 6 100 -20 6 1339 5447 32 0 3 chr13 98939220 98939852 -21344460 + L1Md_F2 LINE L1 5953 6582 0 6 1339 211 93 23 23 chr13 98940159 98940203 -21344109 + (CACCC)n Simple_repeat Simple_repeat 3 46 0 6 1339 507 148 0 0 chr13 98940297 98940385 -21343927 + (CCA)n Simple_repeat Simple_repeat 2 89 0 6 1339 180 256 0 0 chr13 98940650 98940693 -21343619 + MIRb SINE MIR 61 103 -165 6 1339 234 338 105 35 chr13 98941301 98941893 -21342419 - L2 LINE L2 -352 3067 2435 6 1339 395 219 71 20 chr13 98942608 98942706 -21341606 + PB1D10 SINE Alu 8 110 -7 6 1339 234 300 17 0 chr13 98942734 98942794 -21341518 + ID SINE ID 23 83 -141 6 1339 360 0 0 0 chr13 98943894 98943934 -21340378 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1339 351 0 0 0 chr13 98943934 98943972 -21340340 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 1339 1148 173 21 60 chr13 98945030 98945264 -21339048 - URR1B DNA MER1_type 0 225 1 6 1339 244 250 71 0 chr13 98945316 98945372 -21338940 + MIRc SINE MIR 90 149 -119 6 1339 605 139 0 9 chr13 98945946 98946055 -21338257 + (TCCC)n Simple_repeat Simple_repeat 1 108 0 6 1339 1137 76 0 7 chr13 98946743 98946889 -21337423 + B1_Mm SINE Alu 3 147 0 6 1339 585 76 0 0 chr13 98946891 98946970 -21337342 + (GGAAA)n Simple_repeat Simple_repeat 3 81 0 6 1339 465 19 0 0 chr13 98948603 98948657 -21335655 + (GGGA)n Simple_repeat Simple_repeat 1 54 0 6 1339 410 258 99 34 chr13 98948760 98948982 -21335330 + MIRb SINE MIR 2 247 -21 6 1339 852 55 18 0 chr13 98950236 98950346 -21333966 - B2_Mm2 SINE B2 -82 113 2 6 1339 330 263 34 131 chr13 98950360 98950482 -21333830 + MER33 DNA MER1_type 167 271 -53 6 1339 388 276 51 8 chr13 98950482 98950599 -21333713 - PB1 SINE Alu -2 125 4 6 1339 330 263 34 131 chr13 98950599 98950651 -21333661 + MER33 DNA MER1_type 272 324 0 6 1339 289 279 165 25 chr13 98950651 98950809 -21333503 + MLT1J1 LTR MaLR 59 238 -206 6 1339 214 295 85 51 chr13 98951243 98951361 -21332951 + MIRm SINE MIR 27 148 -128 6 1339 480 238 43 68 chr13 98951404 98951566 -21332746 - RSINE1 SINE B4 -4 161 4 6 1339 762 191 0 14 chr13 98951914 98952057 -21332255 - B1_Mur1 SINE Alu -7 142 2 6 1339 294 338 53 15 chr13 98952118 98952250 -21332062 - MER5A DNA MER1_type -49 140 4 6 1339 276 372 125 11 chr13 98953047 98953327 -21330985 - MER97c DNA MER1_type? -470 620 309 6 1339 192 344 133 20 chr13 98954218 98954316 -21329996 + MIRb SINE MIR 102 210 -58 6 1339 1187 268 120 39 chr13 98954520 98955053 -21329259 - RMER4B LTR ERVK -9 576 1 6 1339 228 183 14 40 chr13 98955178 98955252 -21329060 + (TTTG)n Simple_repeat Simple_repeat 2 73 0 6 1339 323 152 0 12 chr13 98955526 98955539 -21328773 + polypyrimidine Low_complexity Low_complexity 68 80 0 6 1339 501 17 0 0 chr13 98955539 98955597 -21328715 + (TG)n Simple_repeat Simple_repeat 2 59 0 6 1339 323 152 0 12 chr13 98955597 98955663 -21328649 + CT-rich Low_complexity Low_complexity 2 67 0 6 1339 789 276 85 52 chr13 98955732 98956003 -21328309 - B4 SINE B4 -12 280 1 6 1339 192 318 107 18 chr13 98956489 98956601 -21327711 - MIRc SINE MIR -24 244 123 6 1339 634 225 6 90 chr13 98956630 98956786 -21327526 + ID_B1 SINE B4 81 223 -1 6 1339 351 327 65 0 chr13 98957045 98957152 -21327160 + PB1D10 SINE Alu 3 116 -1 6 1339 374 289 0 12 chr13 98957207 98957291 -21327021 + B1_Mur3 SINE Alu 1 83 -66 6 1339 256 159 257 14 chr13 98958225 98958295 -21326017 + B4 SINE B4 1 87 -205 7 1339 253 191 0 0 chr13 98958298 98958340 -21325972 + polypurine Low_complexity Low_complexity 3 44 0 7 1339 905 172 0 6 chr13 98958340 98958521 -21325791 + GA-rich Low_complexity Low_complexity 1 180 0 7 1339 410 75 0 0 chr13 98958521 98958574 -21325738 + (GA)n Simple_repeat Simple_repeat 1 53 0 7 1339 852 290 5 24 chr13 98958575 98958787 -21325525 + B4A SINE B4 85 292 0 7 1339 226 194 30 0 chr13 98958789 98958856 -21325456 + (CA)n Simple_repeat Simple_repeat 1 69 0 7 1339 434 291 23 8 chr13 98959128 98959256 -21325056 + Lx9 LINE L1 6585 6714 -930 7 167 5768 106 36 8 chr13 98959255 98960562 -21323750 - Lx3C LINE L1 -472 6504 5172 7 1340 2608 169 42 4 chr13 98960562 98961036 -21323276 + Lx3C LINE L1 6483 6974 -2 7 1340 1638 290 39 60 chr13 98961040 98961657 -21322655 + Lx9 LINE L1 6702 7305 -339 7 1340 432 0 0 0 chr13 98961688 98961736 -21322576 + (TG)n Simple_repeat Simple_repeat 1 48 0 7 1340 1358 102 16 5 chr13 98961760 98961939 -21322373 + B2_Mm2 SINE B2 1 182 -13 7 1340 1202 27 13 0 chr13 98961939 98962088 -21322224 + (GAAA)n Simple_repeat Simple_repeat 2 152 0 7 1340 361 203 0 26 chr13 98963316 98963392 -21320920 - ID4_ SINE ID -6 77 4 7 1340 533 271 10 72 chr13 98963684 98963891 -21320421 - B3A SINE B2 -3 195 2 7 1340 366 248 76 57 chr13 98964214 98964372 -21319940 + L1M5 LINE L1 3039 3199 -2947 7 1340 512 174 193 0 chr13 98964638 98964747 -21319565 + B1_Mur2 SINE Alu 3 132 -17 7 1340 596 233 20 27 chr13 98965270 98965420 -21318892 + B1F SINE Alu 1 149 0 7 1340 818 194 0 7 chr13 98965854 98965999 -21318313 + RSINE1 SINE B4 3 146 -19 7 1340 192 200 0 0 chr13 98966003 98966048 -21318264 + (CATA)n Simple_repeat Simple_repeat 3 47 0 7 1340 775 202 61 44 chr13 98966099 98966280 -21318032 + B3 SINE B2 33 216 0 7 1340 534 295 143 31 chr13 98966756 98966980 -21317332 + B4A SINE B4 18 266 -26 7 1340 270 0 0 0 chr13 98967044 98967074 -21317238 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 1340 460 244 49 32 chr13 98967404 98967527 -21316785 + ID_B1 SINE B4 99 223 -1 7 1340 509 175 140 3 chr13 98967672 98967780 -21316532 + B1_Mus1 SINE Alu 1 120 0 7 1340 405 0 0 0 chr13 98967856 98967901 -21316411 + (CAGA)n Simple_repeat Simple_repeat 2 46 0 7 1340 250 276 0 65 chr13 98968060 98968122 -21316190 + ID4 SINE ID 1 58 -25 7 1340 1050 134 119 43 chr13 98968930 98969140 -21315172 + URR1A DNA MER1_type 1 226 0 7 1340 414 339 111 18 chr13 98970145 98970370 -21313942 - MER2 DNA MER2_type 0 345 100 7 1340 1530 144 22 18 chr13 98970949 98971225 -21313087 + Lx4B LINE L1 6761 7037 -21 7 1340 180 0 0 0 chr13 98971225 98971245 -21313067 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 7 1340 261 276 141 40 chr13 98971609 98971785 -21312527 - MIR3 SINE MIR -13 195 6 7 1340 273 222 30 60 chr13 98971838 98971905 -21312407 - tRNA-Ala-GCA tRNA tRNA -7 68 4 7 1340 551 291 0 0 chr13 98972357 98972484 -21311828 + RSINE1 SINE B4 3 129 -36 7 1340 226 327 132 17 chr13 98972484 98972531 -21311781 + B3A SINE B2 2 195 -3 7 1340 667 198 57 8 chr13 98972615 98972737 -21311575 - RSINE1 SINE B4 -35 130 3 7 1340 477 0 0 0 chr13 98972922 98972975 -21311337 + (CA)n Simple_repeat Simple_repeat 2 54 0 7 1340 24 32 0 0 chr13 98976466 98976497 -21307815 + GC_rich Low_complexity Low_complexity 1 31 0 7 1340 180 170 0 0 chr13 98977126 98977179 -21307133 + A-rich Low_complexity Low_complexity 1 53 0 7 1340 489 62 0 0 chr13 98977522 98977587 -21306725 + (TTC)n Simple_repeat Simple_repeat 2 66 0 7 1340 307 228 49 0 chr13 98978668 98978747 -21305565 + MIRc SINE MIR 90 174 -102 7 1340 763 224 23 6 chr13 98978912 98979083 -21305229 - B3A SINE B2 -24 174 1 7 1340 999 176 82 19 chr13 98979174 98979382 -21304930 - MTC LTR MaLR -2 419 199 7 1340 234 0 0 0 chr13 98979397 98979423 -21304889 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 1340 2227 79 0 22 chr13 98979428 98979740 -21304572 - L1_Mus4 LINE L1 0 6636 6332 7 1340 315 0 0 0 chr13 98979953 98979988 -21304324 + (TG)n Simple_repeat Simple_repeat 2 36 0 7 1340 433 241 164 7 chr13 98979999 98980145 -21304167 + MER5B DNA MER1_type 3 171 -7 7 1340 264 225 0 123 chr13 98980425 98980506 -21303806 + PB1D10 SINE Alu 45 115 -2 7 1340 369 277 170 64 chr13 98980706 98980829 -21303483 + ORSL DNA Tip100 1 158 -117 7 1340 1213 48 0 7 chr13 98980829 98980976 -21303336 - B1_Mus2 SINE Alu 0 147 2 7 1340 369 277 170 64 chr13 98980976 98981087 -21303225 + ORSL DNA Tip100 159 260 -15 7 1340 932 70 8 0 chr13 98982382 98982511 -21301801 + (GA)n Simple_repeat Simple_repeat 1 130 0 7 1340 663 78 0 0 chr13 98982511 98982601 -21301711 + (GAA)n Simple_repeat Simple_repeat 3 92 0 7 1340 2977 32 3 3 chr13 98982725 98983071 -21301241 + ORR1A1 LTR MaLR 1 346 0 7 1340 1324 109 10 10 chr13 98983150 98983345 -21300967 - B2_Mm2 SINE B2 0 195 1 7 1340 295 257 109 45 chr13 98983597 98983707 -21300605 - ID_B1 SINE B4 -20 204 88 7 1340 376 165 161 23 chr13 98983620 98983707 -21300605 - B1F2 SINE Alu -44 105 7 7 1340 258 315 36 93 chr13 98983707 98983759 -21300553 - MT2B2 LTR ERVL -325 258 128 7 1340 414 0 0 0 chr13 98983873 98983919 -21300393 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1340 230 301 67 10 chr13 98984433 98984537 -21299775 - Tigger16a DNA Tigger -455 478 369 7 1340 519 17 0 0 chr13 98984977 98985037 -21299275 + (GA)n Simple_repeat Simple_repeat 1 60 0 7 1340 334 276 53 36 chr13 98985077 98985313 -21298999 + L1_Mur3 LINE L1 5234 5461 -779 7 1340 1284 89 0 0 chr13 98985313 98985493 -21298819 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1340 463 285 110 7 chr13 98985493 98985733 -21298579 + L1_Mur3 LINE L1 5455 5824 -467 7 1340 228 248 22 52 chr13 98986008 98986144 -21298168 + HAL1 LINE L1 1014 1145 -1362 7 1340 641 104 27 27 chr13 98986253 98986401 -21297911 + (TCTCTG)n Simple_repeat Simple_repeat 3 150 0 7 1340 316 262 4 43 chr13 98986912 98987194 -21297118 + CT-rich Low_complexity Low_complexity 1 270 0 7 1340 2570 137 31 19 chr13 98987272 98987688 -21296624 - MTC LTR MaLR 0 421 1 7 1340 1191 51 0 0 chr13 98987749 98987887 -21296425 + B1_Mus1 SINE Alu 2 139 -9 7 1340 243 0 0 0 chr13 98987887 98987914 -21296398 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1340 545 213 39 108 chr13 98988065 98988249 -21296063 + B3A SINE B2 1 195 0 7 1340 274 385 0 0 chr13 98988253 98988349 -21295963 + ID_B1 SINE B4 81 176 -48 7 1340 494 276 0 0 chr13 98988264 98988369 -21295943 + PB1D10 SINE Alu 11 115 -2 7 1340 592 244 32 69 chr13 98988374 98988563 -21295749 + B3A SINE B2 1 182 -16 7 1340 1486 298 140 23 chr13 98988910 98989562 -21294750 - Lx8 LINE L1 -60 7413 6686 7 1340 300 377 73 62 chr13 98990028 98990288 -21294024 - MLT1J LTR MaLR -10 502 240 7 1340 427 17 33 0 chr13 98990681 98990741 -21293571 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 7 1340 231 294 84 50 chr13 98990786 98990965 -21293347 - B2_Mm2 SINE B2 -4 191 7 7 1340 759 204 7 21 chr13 98990828 98990973 -21293339 - RSINE1 SINE B4 -21 144 2 7 1340 2408 81 15 6 chr13 98991116 98991440 -21292872 + ORR1A2 LTR MaLR 1 327 0 7 1340 243 0 0 0 chr13 98993180 98993207 -21291105 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 7 1340 223 204 0 22 chr13 98993241 98993286 -21291026 + T-rich Low_complexity Low_complexity 5 48 0 7 1340 966 192 114 0 chr13 98993414 98993607 -21290705 + B3 SINE B2 2 216 0 7 1340 417 304 65 32 chr13 98993664 98993850 -21290462 + Lx8 LINE L1 6963 7285 -359 7 1340 1007 196 122 101 chr13 98993914 98994299 -21290013 + RLTR9C LTR ERVK 1 393 0 7 1340 2015 194 144 130 chr13 98994887 98995532 -21288780 - RMER13A LTR ERVK -9 851 198 7 1340 480 301 48 14 chr13 98995532 98995677 -21288635 - RLTR9E LTR ERVK -3 406 257 7 1340 187 314 27 89 chr13 98996012 98996124 -21288188 - MIR SINE MIR -48 214 110 7 1340 1238 264 121 5 chr13 98996180 98996618 -21287694 + L1MB2 LINE L1 5682 6170 -1 7 1340 341 252 111 9 chr13 98996970 98997078 -21287234 + MLT1N2 LTR MaLR 369 487 -75 7 1340 184 312 114 62 chr13 98997185 98997458 -21286854 - L2a LINE L2 -102 3324 3038 7 1340 2608 73 0 0 chr13 98997468 98997795 -21286517 - ORR1A2 LTR MaLR 0 327 1 7 1340 441 0 0 0 chr13 98998140 98998189 -21286123 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1340 662 273 127 25 chr13 98998419 98998656 -21285656 + B4 SINE B4 18 278 -14 7 1340 327 104 0 0 chr13 98998665 98998713 -21285599 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1340 488 324 118 26 chr13 98998766 98999247 -21285065 + L1MC LINE L1 5273 5796 -2086 7 1340 497 183 142 42 chr13 98999566 98999686 -21284626 + B1_Mur2 SINE Alu 6 137 -12 7 1340 681 137 0 0 chr13 98999686 98999803 -21284509 + (CCCCCT)n Simple_repeat Simple_repeat 1 117 0 7 1340 260 294 0 14 chr13 98999825 98999894 -21284418 + GA-rich Low_complexity Low_complexity 1 68 0 7 1340 331 326 134 7 chr13 99000156 99000298 -21284014 + L1MC4a LINE L1 6744 6903 -979 1 1340 265 266 31 0 chr13 99000298 99000362 -21283950 + GA-rich Low_complexity Low_complexity 4 69 0 2 1340 786 229 44 7 chr13 99000578 99000821 -21283491 + L1MC4a LINE L1 7340 7664 -218 1 1340 1109 253 11 18 chr13 99001652 99001938 -21282374 + B4A SINE B4 9 292 0 3 1340 1184 74 0 0 chr13 99002130 99002278 -21282034 + B1_Mus1 SINE Alu 1 148 0 4 1340 220 203 0 98 chr13 99002957 99003039 -21281273 - PB1D10 SINE Alu -1 116 43 5 1340 233 161 101 101 chr13 99003204 99003273 -21281039 + L1M4 LINE L1 4602 4670 -1476 6 1340 1056 317 115 12 chr13 99003617 99004121 -21280191 + L1M4 LINE L1 3712 4267 -1879 7 1340 844 92 0 0 chr13 99004121 99004241 -21280071 + B1_Mus1 SINE Alu 28 147 -1 8 1340 232 301 27 0 chr13 99004298 99004371 -21279941 - L1M4 LINE L1 -2302 3844 3770 9 1340 549 294 72 0 chr13 99004386 99004539 -21279773 + RSINE1 SINE B4 2 165 0 1 1340 443 18 18 0 chr13 99004571 99004627 -21279685 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1 1340 551 288 24 0 chr13 99004631 99004801 -21279511 + L1MC2 LINE L1 4068 4241 -1905 1 1340 21 0 0 0 chr13 99004822 99004843 -21279469 + GC_rich Low_complexity Low_complexity 1 21 0 1 1340 828 150 8 0 chr13 99004843 99005090 -21279222 + (CA)n Simple_repeat Simple_repeat 1 249 0 1 1340 1378 271 140 98 chr13 99005132 99005384 -21278928 + L1MC2 LINE L1 4341 4623 -1523 1 1340 264 219 94 0 chr13 99005384 99005448 -21278864 + B3A SINE B2 1 70 -128 1 1340 1378 271 140 98 chr13 99005448 99006044 -21278268 + L1MC2 LINE L1 4624 5295 -851 1 1340 1116 197 14 19 chr13 99006044 99006256 -21278056 + B3 SINE B2 1 211 -5 1 1340 1378 271 140 98 chr13 99006256 99006269 -21278043 + L1MC2 LINE L1 5296 5305 -841 1 1340 587 244 84 60 chr13 99006351 99006600 -21277712 + L1MC2 LINE L1 5646 5900 -444 1 1340 1124 62 0 14 chr13 99006651 99006798 -21277514 - B1_Mus2 SINE Alu 0 147 3 1 1340 207 0 0 0 chr13 99007264 99007287 -21277025 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1340 864 203 88 0 chr13 99007356 99007538 -21276774 - B3 SINE B2 -18 198 1 1 1340 360 188 20 59 chr13 99007955 99008057 -21276255 + L1MC2 LINE L1 5778 5875 -469 2 1340 405 194 0 0 chr13 99008058 99008148 -21276164 + ORR1A2 LTR MaLR 1 90 -256 2 1340 489 244 0 0 chr13 99008147 99008237 -21276075 + RSINE1 SINE B4 60 149 -16 2 1340 264 224 0 0 chr13 99008249 99008316 -21275996 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1340 1060 108 0 6 chr13 99008316 99008474 -21275838 + RMER6B LTR ERVK 303 459 -2 2 1340 304 326 0 11 chr13 99008784 99008877 -21275435 + ORR1E LTR MaLR 1 92 -267 2 1340 235 146 18 18 chr13 99009120 99009176 -21275136 + GA-rich Low_complexity Low_complexity 1 56 0 2 1340 352 229 82 129 chr13 99009310 99009594 -21274718 + ORR1E LTR MaLR 81 372 -7 2 1340 316 328 32 16 chr13 99010714 99010838 -21273474 + MIRc SINE MIR 46 171 -97 2 1340 981 224 108 83 chr13 99011521 99011872 -21272440 + MTEa LTR MaLR 1 360 -19 2 1340 509 232 35 0 chr13 99012188 99012330 -21271982 + MLT2B3 LTR ERVL 1 147 -407 2 1340 287 313 59 41 chr13 99012367 99012537 -21271775 + MLT2B3 LTR ERVL 251 423 -97 2 1340 1342 135 122 5 chr13 99012977 99013272 -21271040 + ORR1C2 LTR MaLR 2 351 -33 3 1340 3856 158 12 36 chr13 99013272 99013407 -21270905 + RMER13B LTR ERVK 1 134 -774 3 1340 201 39 0 0 chr13 99013407 99013433 -21270879 + (CCA)n Simple_repeat Simple_repeat 1 26 0 3 1340 3856 158 12 36 chr13 99013433 99014025 -21270287 + RMER13B LTR ERVK 135 711 -197 3 1340 381 356 92 22 chr13 99014669 99014942 -21269370 + MLT2B2 LTR ERVL 151 442 -73 3 1340 806 227 73 76 chr13 99015513 99015819 -21268493 - MTD LTR MaLR -56 323 33 3 1340 264 252 148 25 chr13 99015873 99015995 -21268317 + L2a LINE L2 3227 3363 -63 3 1340 739 140 236 0 chr13 99016332 99016510 -21267802 - URR1B DNA MER1_type 0 225 6 3 1340 879 150 7 20 chr13 99017162 99017312 -21267000 + B1_Mur4 SINE Alu 3 150 0 3 1340 709 178 22 7 chr13 99017839 99017975 -21266337 + B1_Mus1 SINE Alu 11 148 0 3 1340 21 0 0 0 chr13 99018200 99018221 -21266091 + AT_rich Low_complexity Low_complexity 1 21 0 3 1340 386 291 160 4 chr13 99019535 99019766 -21264546 + B4A SINE B4 1 267 -25 4 1340 28 0 0 0 chr13 99020370 99020398 -21263914 + AT_rich Low_complexity Low_complexity 1 28 0 4 1340 211 270 122 0 chr13 99020411 99020485 -21263827 - ID4 SINE ID 0 83 1 4 1340 400 248 42 8 chr13 99021028 99021146 -21263166 - B1F1 SINE Alu -14 135 14 4 1340 466 250 60 0 chr13 99021188 99021304 -21263008 + B4 SINE B4 86 208 -84 4 1340 1037 192 104 4 chr13 99021321 99021561 -21262751 + MTD LTR MaLR 10 273 -146 4 1340 210 250 33 16 chr13 99021592 99021714 -21262598 + (TATAA)n Simple_repeat Simple_repeat 1 124 0 4 1340 315 154 90 0 chr13 99021729 99021807 -21262505 + MTD LTR MaLR 333 417 -2 4 1340 277 261 62 18 chr13 99024344 99024457 -21259855 + MER33 DNA MER1_type 205 322 -2 4 1340 363 309 36 14 chr13 99025266 99025404 -21258908 + RSINE1 SINE B4 3 143 -22 4 1340 884 221 77 0 chr13 99025587 99025782 -21258530 + B3 SINE B2 1 210 -6 4 1340 193 346 28 37 chr13 99025980 99026088 -21258224 - MIRc SINE MIR -145 123 17 5 1340 252 254 0 54 chr13 99026129 99026144 -21258168 + ORR1B1-int LTR MaLR 633 640 -869 5 1340 1087 56 0 5 chr13 99026144 99026298 -21258014 + B1_Mus1 SINE Alu 1 148 0 5 1340 220 254 113 0 chr13 99027650 99027721 -21256591 - ID2 SINE ID -4 79 1 5 1340 469 202 30 82 chr13 99028078 99028213 -21256099 + RSINE1 SINE B4 38 165 0 5 1340 271 165 279 0 chr13 99028512 99028591 -21255721 - B2_Mm2 SINE B2 -93 102 2 5 1340 21 36 0 0 chr13 99029813 99029841 -21254471 + AT_rich Low_complexity Low_complexity 1 28 0 5 1340 266 322 16 56 chr13 99030089 99030214 -21254098 - B3 SINE B2 0 216 97 5 1340 519 212 53 112 chr13 99030213 99030383 -21253929 - ID_B1 SINE B4 -56 168 9 5 1340 583 144 18 0 chr13 99031131 99031242 -21253070 + (CA)n Simple_repeat Simple_repeat 2 114 0 5 1340 188 67 33 0 chr13 99031574 99031604 -21252708 + (GAA)n Simple_repeat Simple_repeat 3 33 0 6 1340 329 281 0 0 chr13 99031922 99032011 -21252301 - MER58D DNA MER1_type -20 366 278 6 1340 251 258 61 0 chr13 99032124 99032190 -21252122 - MER58D DNA MER1_type -291 95 26 6 1340 24 32 0 0 chr13 99033051 99033082 -21251230 + GC_rich Low_complexity Low_complexity 1 31 0 6 1340 259 157 60 32 chr13 99034016 99034113 -21250199 + B1_Mur4 SINE Alu 1 119 -1 6 1340 819 183 0 27 chr13 99034556 99034702 -21249610 - B1_Mur2 SINE Alu -7 142 1 6 1340 520 168 20 10 chr13 99034702 99034804 -21249508 - Lx9 LINE L1 -199 7445 7343 6 1340 559 294 26 13 chr13 99035153 99035308 -21249004 + RSINE1 SINE B4 3 159 -6 6 1340 1239 21 7 0 chr13 99035724 99035868 -21248444 - B1_Mus2 SINE Alu 0 147 3 6 1340 569 208 89 32 chr13 99036670 99036794 -21247518 + B1_Mur1 SINE Alu 1 131 -18 6 1340 312 125 0 0 chr13 99036794 99036858 -21247454 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1340 263 312 16 0 chr13 99037950 99038024 -21246288 + AluF_3 SINE Alu 150 208 -103 7 1340 857 232 25 15 chr13 99038616 99038817 -21245495 + B3 SINE B2 1 203 -13 7 1340 465 223 39 15 chr13 99038817 99038939 -21245373 - B1F1 SINE Alu -21 126 1 7 1340 1236 41 0 0 chr13 99039006 99039153 -21245159 - B1_Mus2 SINE Alu 0 147 1 7 1340 1450 94 16 0 chr13 99039521 99039713 -21244599 - B2_Mm2 SINE B2 0 195 1 7 1340 611 236 74 42 chr13 99040137 99040327 -21243985 + B3A SINE B2 1 196 -2 7 1340 291 312 10 10 chr13 99040667 99040764 -21243548 - MIRc SINE MIR -146 122 26 7 1340 26 64 0 0 chr13 99043582 99043629 -21240683 + AT_rich Low_complexity Low_complexity 1 47 0 7 1340 584 229 156 0 chr13 99044225 99044404 -21239908 + B3 SINE B2 1 207 -9 7 1340 2056 176 60 86 chr13 99044484 99045005 -21239307 - RLTR18B LTR ERVK -5 507 1 7 1340 448 299 86 26 chr13 99045326 99045477 -21238835 - RSINE1 SINE B4 -3 162 3 8 1340 452 268 18 0 chr13 99046263 99046375 -21237937 - RSINE1 SINE B4 -14 151 38 8 1340 1245 48 0 0 chr13 99046570 99046717 -21237595 + B1_Mus2 SINE Alu 1 147 0 8 1340 207 0 0 0 chr13 99046717 99046740 -21237572 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1340 523 204 51 0 chr13 99047126 99047263 -21237049 - HAL1-2a_MD LINE L1 -557 2467 2324 8 1340 981 121 39 39 chr13 99047557 99047737 -21236575 - B2_Mm2 SINE B2 -15 180 1 8 1340 299 253 0 29 chr13 99047899 99047995 -21236317 + B4A SINE B4 3 93 -72 8 1340 936 141 14 0 chr13 99048093 99048235 -21236077 + B1_Mur3 SINE Alu 5 148 -1 8 1340 665 200 67 0 chr13 99048748 99048883 -21235429 + B1_Mur2 SINE Alu 1 144 -5 8 1340 686 207 27 27 chr13 99048955 99049104 -21235208 + B1_Mur4 SINE Alu 1 149 -1 8 1340 765 166 244 17 chr13 99049203 99049375 -21234937 - B3 SINE B2 -5 211 1 9 1340 450 0 0 0 chr13 99049495 99049545 -21234767 + (TG)n Simple_repeat Simple_repeat 2 51 0 9 1340 23 0 0 0 chr13 99049563 99049586 -21234726 + AT_rich Low_complexity Low_complexity 1 23 0 9 1340 288 91 0 0 chr13 99050159 99050203 -21234109 + (TGGG)n Simple_repeat Simple_repeat 3 46 0 9 1340 734 67 0 9 chr13 99050203 99050309 -21234003 + (TAGA)n Simple_repeat Simple_repeat 3 107 0 9 1340 379 270 50 21 chr13 99050665 99050805 -21233507 + B1F SINE Alu 1 144 -5 9 1340 253 400 0 0 chr13 99050817 99050897 -21233415 + ID4_ SINE ID 3 82 -1 9 1340 665 192 130 0 chr13 99051123 99051284 -21233028 + B3 SINE B2 3 184 -32 9 1340 740 221 69 20 chr13 99051331 99051534 -21232778 + B3 SINE B2 4 216 0 9 1340 1060 62 0 0 chr13 99051684 99051814 -21232498 + B1_Mus1 SINE Alu 1 130 -18 9 1340 589 287 103 40 chr13 99051880 99052181 -21232131 + MER2 DNA MER2_type 1 320 -25 1 1340 180 0 0 0 chr13 99052937 99052957 -21231355 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 1 1340 1291 85 0 55 chr13 99053048 99053247 -21231065 - B2_Mm2 SINE B2 -6 189 2 1 1340 661 240 53 0 chr13 99054145 99054295 -21230017 - B3A SINE B2 -5 193 36 1 1340 530 234 196 26 chr13 99054503 99054692 -21229620 + RMER21B LTR ERV1 347 567 -275 1 1340 239 318 45 27 chr13 99054764 99054874 -21229438 + L1ME3 LINE L1 6002 6113 -49 1 1340 209 194 0 0 chr13 99055319 99055355 -21228957 + (CATATA)n Simple_repeat Simple_repeat 4 39 0 1 1340 256 345 0 22 chr13 99055474 99055563 -21228749 + MLT1N2 LTR MaLR 112 198 -364 1 1340 483 274 94 11 chr13 99055796 99055977 -21228335 - B3A SINE B2 -1 197 2 1 1340 1060 225 75 43 chr13 99056214 99056642 -21227670 - RMER2 LTR ERV1 0 567 25 1 1340 291 383 0 0 chr13 99056724 99056805 -21227507 - ID4_ SINE ID -1 82 2 1 1340 321 26 0 0 chr13 99057075 99057113 -21227199 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1340 927 193 90 66 chr13 99057290 99057501 -21226811 - B3 SINE B2 0 216 1 1 1340 534 257 9 0 chr13 99057879 99057984 -21226328 - B1_Mur1 SINE Alu -36 113 8 1 1340 298 374 65 0 chr13 99057984 99058002 -21226310 - B4 SINE B4 -90 202 72 1 1340 2049 129 32 0 chr13 99058008 99058317 -21225995 - ORR1A2 LTR MaLR -8 319 1 1 1340 352 249 51 61 chr13 99059169 99059383 -21224929 - RMER17D LTR ERVK -344 545 334 1 1340 502 308 270 8 chr13 99059412 99059661 -21224651 + MER2 DNA MER2_type 27 340 -5 1 1340 849 253 4 2 chr13 99059705 99059905 -21224407 + B3A SINE B2 14 216 0 1 1340 608 246 244 6 chr13 99060003 99060175 -21224137 - B3 SINE B2 -3 213 1 1 1340 528 81 0 0 chr13 99060190 99060264 -21224048 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 1 1340 240 35 0 0 chr13 99060262 99060291 -21224021 + (TC)n Simple_repeat Simple_repeat 1 29 0 1 1340 255 61 0 0 chr13 99060291 99060324 -21223988 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1 1340 854 184 7 0 chr13 99060324 99060465 -21223847 - B1_Mur4 SINE Alu -4 146 5 1 1340 970 122 65 16 chr13 99060791 99060975 -21223337 - B2_Mm2 SINE B2 -2 193 1 1 1340 736 239 100 8 chr13 99061036 99061237 -21223075 - B3A SINE B2 -5 211 1 1 1340 570 241 0 0 chr13 99061318 99061430 -21222882 - PB1D10 SINE Alu 0 117 6 1 1340 630 251 88 55 chr13 99061592 99061773 -21222539 + ID_B1 SINE B4 30 216 -8 1 1340 1122 209 186 19 chr13 99061807 99062124 -21222188 + ORR1D2 LTR MaLR 1 370 0 1 1340 879 53 0 0 chr13 99062556 99062669 -21221643 + (TTTC)n Simple_repeat Simple_repeat 2 114 0 1 1340 948 173 12 6 chr13 99062673 99062836 -21221476 - B2_Mm2 SINE B2 -31 164 1 1 1340 663 165 23 38 chr13 99063867 99063999 -21220313 + B1_Mur1 SINE Alu 4 133 -16 1 1340 240 35 0 0 chr13 99064004 99064033 -21220279 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 1 1340 799 151 7 46 chr13 99064145 99064298 -21220014 + B1_Mus1 SINE Alu 1 147 -1 1 1340 237 65 0 0 chr13 99064301 99064332 -21219980 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1340 306 276 145 8 chr13 99064426 99064543 -21219769 + MIRb SINE MIR 123 255 -13 1 1340 244 188 171 24 chr13 99064715 99064797 -21219515 + MER31B LTR ERV1 1 94 -372 1 1340 842 186 53 153 chr13 99064799 99065126 -21219186 - ORR1D1 LTR MaLR -2 372 1 1 1340 378 0 0 0 chr13 99065810 99065852 -21218460 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1340 1229 48 0 0 chr13 99067044 99067191 -21217121 - B1_Mus2 SINE Alu 0 147 1 1 1340 363 289 0 10 chr13 99067763 99067861 -21216451 - MLT1A1 LTR MaLR -94 314 218 1 1340 186 43 0 0 chr13 99067939 99067962 -21216350 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1 1340 955 141 36 23 chr13 99067970 99068159 -21216153 - B2_Mm2 SINE B2 -22 194 1 1 1340 1116 147 82 14 chr13 99068225 99068432 -21215880 + URR1A DNA MER1_type 6 226 0 1 1340 248 143 24 0 chr13 99068467 99068509 -21215803 - MLT1A1 LTR MaLR -365 43 1 1 1340 1269 26 0 0 chr13 99069266 99069419 -21214893 + (TC)n Simple_repeat Simple_repeat 2 154 0 1 1340 311 281 100 7 chr13 99069708 99069813 -21214499 + Charlie7a DNA MER1_type 40 156 -116 1 1340 324 0 0 0 chr13 99069813 99069849 -21214463 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1340 311 281 100 7 chr13 99069849 99069883 -21214429 + Charlie7a DNA MER1_type 157 192 -80 1 1340 824 219 149 112 chr13 99069985 99070412 -21213900 - MT2A LTR ERVL -20 581 3 1 1340 358 107 0 35 chr13 99070414 99070472 -21213840 - MERVL_2A-int LTR ERVL 0 5761 5706 1 1340 310 189 0 42 chr13 99070472 99070544 -21213768 - ORR1A3-int LTR MaLR -1324 639 571 1 1340 341 245 9 67 chr13 99070624 99070729 -21213583 - PB1D10 SINE Alu -14 103 5 1 1340 334 291 38 0 chr13 99070826 99070905 -21213407 - RMER30 DNA MER1_type -113 89 8 1 1340 300 314 40 32 chr13 99070908 99071033 -21213279 + RSINE1 SINE B4 26 151 -14 1 1340 396 0 0 0 chr13 99071036 99071080 -21213232 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1340 993 116 0 0 chr13 99072592 99072747 -21211565 + (CA)n Simple_repeat Simple_repeat 2 156 0 1 1340 250 277 244 6 chr13 99072815 99072975 -21211337 - MIRb SINE MIR -34 234 37 1 1340 231 275 14 28 chr13 99073212 99073283 -21211029 + 4.5SRNA scRNA scRNA 19 88 -6 1 1340 256 224 0 49 chr13 99073227 99073288 -21211024 + ID_B1 SINE B4 119 176 -48 1 1340 327 121 42 83 chr13 99073242 99073314 -21210998 + PB1D10 SINE Alu 49 117 0 1 1340 414 311 62 54 chr13 99073331 99073460 -21210852 + RSINE1 SINE B4 24 153 -12 1 1340 450 0 0 0 chr13 99073612 99073662 -21210650 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1340 366 289 104 51 chr13 99073798 99074052 -21210260 + LTR16B LTR ERVL 130 459 -4 1 1340 216 0 0 0 chr13 99074220 99074244 -21210068 + (CA)n Simple_repeat Simple_repeat 2 25 0 1 1340 674 254 53 10 chr13 99074396 99074603 -21209709 + ID_B1 SINE B4 1 216 -8 1 1340 250 288 38 0 chr13 99074631 99074711 -21209601 + ID4 SINE ID 1 83 0 1 1340 450 94 0 0 chr13 99075040 99075104 -21209208 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 1340 273 114 0 0 chr13 99075100 99075137 -21209175 + (GGA)n Simple_repeat Simple_repeat 2 38 0 1 1340 567 0 0 0 chr13 99075137 99075200 -21209112 + (GGAA)n Simple_repeat Simple_repeat 4 66 0 1 1340 273 114 0 0 chr13 99075200 99075206 -21209106 + (GGA)n Simple_repeat Simple_repeat 3 8 0 1 1340 407 247 155 0 chr13 99075489 99075586 -21208726 + PB1D9 SINE Alu 2 113 -7 1 1340 270 268 0 0 chr13 99076064 99076120 -21208192 + polypurine Low_complexity Low_complexity 2 57 0 1 1340 701 248 169 25 chr13 99077519 99077845 -21206467 - L1_Rod LINE L1 0 5847 5475 1 1340 205 322 76 22 chr13 99077890 99077982 -21206330 + MIRb SINE MIR 47 143 -125 1 1340 1289 77 6 0 chr13 99078428 99078597 -21205715 + B2_Mm2 SINE B2 1 170 -25 1 1340 1211 62 0 0 chr13 99079324 99079470 -21204842 - B1_Mus2 SINE Alu 0 147 2 1 1340 247 257 62 86 chr13 99079480 99079561 -21204751 + B3 SINE B2 104 182 -34 1 1340 802 125 278 0 chr13 99080299 99080475 -21203837 - URR1B DNA MER1_type 0 225 1 1 1340 278 355 11 11 chr13 99080605 99080699 -21203613 + ID_B1 SINE B4 82 175 -49 1 1340 448 272 4 23 chr13 99080616 99080735 -21203577 + PB1D10 SINE Alu 13 128 -21 1 1340 337 295 57 9 chr13 99081289 99081395 -21202917 + PB1D9 SINE Alu 1 111 -9 1 1340 511 245 94 85 chr13 99081902 99082103 -21202209 + MTD LTR MaLR 1 203 -216 1 1340 303 168 154 34 chr13 99082143 99082260 -21202052 + Lx9 LINE L1 7513 7643 -1 1 1340 534 259 64 7 chr13 99082303 99082443 -21201869 + MTD LTR MaLR 272 419 0 1 1340 260 311 115 10 chr13 99082615 99082719 -21201593 - PB1D10 SINE Alu -2 115 1 1 1340 350 248 27 45 chr13 99083811 99083921 -21200391 + B1_Mur1 SINE Alu 41 148 -1 1 1340 198 0 0 0 chr13 99085554 99085576 -21198736 + (TAA)n Simple_repeat Simple_repeat 3 24 0 1 1340 198 0 0 0 chr13 99085923 99085945 -21198367 + (TCTA)n Simple_repeat Simple_repeat 2 23 0 1 1340 212 120 0 20 chr13 99086047 99086098 -21198214 + (CAAAAA)n Simple_repeat Simple_repeat 5 54 0 1 1340 204 255 21 0 chr13 99086131 99086178 -21198134 + GA-rich Low_complexity Low_complexity 1 48 0 1 1340 286 275 0 37 chr13 99086429 99086565 -21197747 + (CCCCG)n Simple_repeat Simple_repeat 1 131 0 1 1340 306 283 8 50 chr13 99087658 99087777 -21196535 - PB1D7 SINE Alu -4 116 3 1 1340 246 81 0 0 chr13 99088297 99088334 -21195978 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1340 1177 49 7 0 chr13 99088338 99088482 -21195830 - B1_Mus2 SINE Alu -2 145 1 1 1340 1167 63 7 0 chr13 99089133 99089275 -21195037 - B1_Mus1 SINE Alu -5 143 1 1 1340 252 86 0 0 chr13 99089338 99089373 -21194939 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1340 324 310 62 0 chr13 99089375 99089488 -21194824 - RSINE1 SINE B4 -41 124 5 1 1340 28 48 0 0 chr13 99089783 99089825 -21194487 + AT_rich Low_complexity Low_complexity 1 42 0 1 1340 371 21 21 0 chr13 99089940 99089988 -21194324 + (TC)n Simple_repeat Simple_repeat 2 50 0 1 1340 1306 97 27 0 chr13 99090036 99090221 -21194091 - B2_Mm2 SINE B2 -4 191 2 1 1341 300 53 0 0 chr13 99090636 99090674 -21193638 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1341 1125 51 0 0 chr13 99090675 99090813 -21193499 - B1_Mus1 SINE Alu -9 139 2 1 1341 1275 205 52 58 chr13 99091399 99091746 -21192566 + ERVL-int LTR ERVL 4781 5125 -632 1 1341 1712 137 60 0 chr13 99091935 99092220 -21192092 + MTC LTR MaLR 1 302 -119 2 1341 644 14 0 0 chr13 99092213 99092287 -21192025 - B2_Mm2 SINE B2 -120 75 2 2 1341 822 194 27 43 chr13 99092308 99092458 -21191854 - ORR1C2 LTR MaLR -51 333 183 2 1341 615 48 0 0 chr13 99092458 99092541 -21191771 + (GA)n Simple_repeat Simple_repeat 2 84 0 2 1341 822 194 27 43 chr13 99092541 99092578 -21191734 - ORR1C2 LTR MaLR -202 182 149 2 1341 630 193 9 9 chr13 99092562 99092677 -21191635 + MTC LTR MaLR 303 417 -4 2 1341 1411 59 48 0 chr13 99092840 99093026 -21191286 + B2_Mm2 SINE B2 1 195 0 2 1341 626 190 232 6 chr13 99093368 99093532 -21190780 + B3 SINE B2 1 201 -15 2 1341 466 141 0 12 chr13 99093815 99093901 -21190411 + L1Md_F3 LINE L1 6500 6584 0 2 1341 263 70 0 65 chr13 99093982 99094028 -21190284 - B1_Mur4 SINE Alu -1 149 107 2 1341 818 243 29 24 chr13 99094562 99094769 -21189543 - B3 SINE B2 -7 209 2 2 1341 21 36 0 0 chr13 99094952 99094980 -21189332 + AT_rich Low_complexity Low_complexity 1 28 0 2 1341 222 118 0 0 chr13 99095664 99095698 -21188614 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1341 1229 54 0 0 chr13 99095698 99095845 -21188467 - B1_Mus2 SINE Alu 0 147 1 2 1341 319 284 0 0 chr13 99095845 99095912 -21188400 - PB1 SINE Alu -59 68 2 2 1341 3218 5 0 76 chr13 99095982 99096379 -21187933 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1341 9565 27 3 0 chr13 99096379 99097458 -21186854 - IAPEz-int LTR ERVK 0 6481 5400 2 1341 21649 36 42 4 chr13 99097433 99100004 -21184308 - IAPEz-int LTR ERVK -3807 2674 8 2 1341 3218 5 0 76 chr13 99100004 99100401 -21183911 - IAPLTR1_Mm LTR ERVK 0 367 1 2 1341 783 288 6 0 chr13 99100401 99100571 -21183741 - B3 SINE B2 -44 172 2 2 1341 358 200 29 0 chr13 99100648 99100718 -21183594 + MTE2a LTR MaLR 12 83 -296 2 1341 2338 124 55 61 chr13 99100746 99101137 -21183175 + RLTR11B LTR ERVK 1 372 -81 2 1341 324 0 0 0 chr13 99101137 99101173 -21183139 + (TAAAA)n Simple_repeat Simple_repeat 3 38 0 2 1341 2338 124 55 61 chr13 99101173 99101237 -21183075 + RLTR11B LTR ERVK 373 452 -1 2 1341 482 290 124 48 chr13 99101238 99101448 -21182864 + MTE2a LTR MaLR 62 287 -92 2 1341 305 259 114 54 chr13 99101605 99101622 -21182690 + L1MA5 LINE L1 6083 6097 -203 2 1341 1990 140 127 16 chr13 99101622 99101999 -21182313 - MTC LTR MaLR -2 419 1 2 1341 333 229 124 14 chr13 99101999 99102148 -21182164 + L1MA5 LINE L1 6098 6259 -41 2 1341 699 239 120 0 chr13 99102149 99102333 -21181979 + B3 SINE B2 2 207 -9 2 1341 459 171 111 2 chr13 99102335 99102455 -21181857 - B1_Mur4 SINE Alu -20 130 1 2 1341 233 337 31 42 chr13 99102372 99102468 -21181844 - ID_B1 SINE B4 -63 161 67 2 1341 358 359 50 75 chr13 99103413 99103735 -21180577 - MER106B DNA MER1_type -745 314 1 2 1341 1755 122 103 59 chr13 99103977 99104335 -21179977 - ORR1D1 LTR MaLR 0 374 1 2 1341 2294 188 34 9 chr13 99104357 99104397 -21179915 + RMER4A LTR ERVK 1 45 -421 2 1341 378 0 0 0 chr13 99104397 99104439 -21179873 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1341 393 39 0 0 chr13 99104439 99104489 -21179823 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1341 2294 188 34 9 chr13 99104489 99104893 -21179419 + RMER4A LTR ERVK 46 455 -11 2 1341 378 246 35 43 chr13 99105744 99105859 -21178453 - RMER15 LTR ERVL -40 535 422 2 1341 305 337 128 54 chr13 99105866 99106070 -21178242 - Lx8 LINE L1 -221 7252 7034 2 1341 207 0 0 0 chr13 99106444 99106467 -21177845 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1341 444 51 0 0 chr13 99106467 99106525 -21177787 + (CAGAGA)n Simple_repeat Simple_repeat 3 61 0 2 1341 279 54 0 0 chr13 99106566 99106603 -21177709 + (TG)n Simple_repeat Simple_repeat 1 37 0 2 1341 396 0 0 0 chr13 99106670 99106714 -21177598 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1341 756 278 0 35 chr13 99106929 99107130 -21177182 - RMER30 DNA MER1_type -2 200 7 2 1341 180 200 0 0 chr13 99107182 99107227 -21177085 + CT-rich Low_complexity Low_complexity 2 46 0 2 1341 277 268 45 23 chr13 99107260 99107348 -21176964 + MLT1A1 LTR MaLR 1 90 -318 2 1341 181 378 78 0 chr13 99107669 99107759 -21176553 + MIRm SINE MIR 175 271 -5 2 1341 903 86 23 8 chr13 99107775 99107904 -21176408 + B1_Mus1 SINE Alu 4 134 -14 2 1341 260 0 57 0 chr13 99107904 99107939 -21176373 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 2 1341 1697 206 101 39 chr13 99108048 99108672 -21175640 + BGLII_B LTR ERVK 1 553 0 2 1341 696 213 13 90 chr13 99108725 99108880 -21175432 - B1_Mus2 SINE Alu 0 147 5 2 1341 648 286 36 36 chr13 99109094 99109286 -21175026 + B4A SINE B4 86 277 -15 2 1341 226 274 40 14 chr13 99109718 99109792 -21174520 + L1M5 LINE L1 5449 5524 -600 2 1341 225 340 141 39 chr13 99110212 99110368 -21173944 + MIRb SINE MIR 81 252 -16 2 1341 423 291 138 43 chr13 99111169 99111431 -21172881 - MLT1A0 LTR MaLR -15 359 58 2 1341 707 233 76 107 chr13 99111441 99111638 -21172674 - B3A SINE B2 -1 192 2 2 1341 930 85 0 0 chr13 99111974 99112103 -21172209 + (GGAA)n Simple_repeat Simple_repeat 4 132 0 2 1341 318 106 0 0 chr13 99112132 99112179 -21172133 + (TGG)n Simple_repeat Simple_repeat 1 47 0 2 1341 402 345 7 27 chr13 99112230 99112376 -21171936 - RSINE1 SINE B4 -20 145 3 2 1341 462 276 31 124 chr13 99112413 99112547 -21171765 + MER5B DNA MER1_type 1 120 -58 2 1341 1735 145 111 95 chr13 99112547 99112727 -21171585 + ORR1B2 LTR MaLR 3 151 -216 2 1341 255 122 0 0 chr13 99112727 99112776 -21171536 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 2 1341 1735 145 111 95 chr13 99112776 99112954 -21171358 + ORR1B2 LTR MaLR 152 366 -1 2 1341 462 276 31 124 chr13 99112954 99113013 -21171299 + MER5B DNA MER1_type 121 176 -2 2 1341 392 330 0 9 chr13 99113596 99113712 -21170600 - PB1D7 SINE Alu -2 118 4 2 1341 24 77 0 0 chr13 99113729 99113781 -21170531 + AT_rich Low_complexity Low_complexity 1 52 0 2 1341 387 0 0 0 chr13 99113792 99113835 -21170477 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2 1341 262 287 81 0 chr13 99114472 99114559 -21169753 + MLT1G3 LTR MaLR 13 106 -489 2 1341 429 269 65 100 chr13 99114565 99114669 -21169643 + MLT1B LTR MaLR 7 107 -360 2 1341 911 151 0 0 chr13 99114669 99114808 -21169504 - B1_Mus2 SINE Alu -8 139 1 2 1341 506 256 172 112 chr13 99114808 99115104 -21169208 + MLT1B LTR MaLR 79 379 -11 2 1341 384 253 60 78 chr13 99115144 99115311 -21169001 + MLT1G3 LTR MaLR 264 427 -168 2 1341 1191 230 102 28 chr13 99115361 99115683 -21168629 + RLTR20D LTR ERVK 103 448 -120 2 1341 1091 144 39 0 chr13 99115801 99115982 -21168330 + B2_Mm2 SINE B2 2 189 -6 2 1341 1309 72 72 0 chr13 99116015 99116196 -21168116 + B2_Mm2 SINE B2 1 194 -1 2 1341 557 216 18 18 chr13 99116212 99116322 -21167990 + polypurine Low_complexity Low_complexity 4 113 0 2 1341 2258 81 52 0 chr13 99116322 99116632 -21167680 + IAPLTR2b LTR ERVK 1 326 -1 2 1341 645 49 0 0 chr13 99116632 99116713 -21167599 + (GAAA)n Simple_repeat Simple_repeat 3 83 0 2 1341 1108 61 0 58 chr13 99116713 99116869 -21167443 + B1_Mus1 SINE Alu 2 148 0 2 1341 557 216 18 18 chr13 99116869 99116926 -21167386 + polypurine Low_complexity Low_complexity 114 171 0 2 1341 388 341 120 61 chr13 99116941 99117432 -21166880 + L2 LINE L2 2562 3081 -338 2 1341 254 29 29 0 chr13 99117632 99117667 -21166645 + (CTATT)n Simple_repeat Simple_repeat 2 37 0 2 1341 210 125 50 0 chr13 99117981 99118021 -21166291 + T-rich Low_complexity Low_complexity 2 43 0 2 1341 362 157 28 21 chr13 99118417 99118560 -21165752 + (TCTA)n Simple_repeat Simple_repeat 4 147 0 2 1341 881 157 218 11 chr13 99119119 99119293 -21165019 + B3 SINE B2 5 214 -2 2 1341 341 235 15 0 chr13 99119653 99119721 -21164591 + RSINE1 SINE B4 67 135 -30 2 1341 378 277 68 25 chr13 99120823 99120972 -21163340 + L1MA8 LINE L1 5719 5871 -300 2 1341 1369 210 12 52 chr13 99120972 99121299 -21163013 - MTD LTR MaLR -105 314 1 2 1341 522 0 0 0 chr13 99121838 99121896 -21162416 + (GGATG)n Simple_repeat Simple_repeat 4 61 0 2 1341 209 204 0 0 chr13 99124636 99124685 -21159627 + GA-rich Low_complexity Low_complexity 1 49 0 2 1341 201 39 0 0 chr13 99124685 99124711 -21159601 + (CGG)n Simple_repeat Simple_repeat 2 27 0 2 1341 216 262 24 0 chr13 99124860 99124944 -21159368 + G-rich Low_complexity Low_complexity 1 86 0 2 1341 26 50 0 0 chr13 99125309 99125349 -21158963 + GC_rich Low_complexity Low_complexity 1 40 0 2 1341 211 171 0 26 chr13 99125449 99125527 -21158785 + (CCG)n Simple_repeat Simple_repeat 2 77 0 2 1341 22 70 0 0 chr13 99125730 99125773 -21158539 + GC_rich Low_complexity Low_complexity 1 43 0 2 1341 216 158 0 0 chr13 99129354 99129392 -21154920 + A-rich Low_complexity Low_complexity 1 38 0 2 1341 243 190 0 0 chr13 99129677 99129735 -21154577 + G-rich Low_complexity Low_complexity 1 58 0 2 1341 255 179 0 176 chr13 99130931 99130999 -21153313 + PB1 SINE Alu 72 127 0 2 1341 194 257 95 54 chr13 99131317 99131391 -21152921 - L2 LINE L2 -561 2858 2782 2 1341 267 246 16 16 chr13 99131380 99131442 -21152870 - MIRc SINE MIR -119 149 88 2 1341 936 117 0 0 chr13 99131726 99131871 -21152441 + (TTCTC)n Simple_repeat Simple_repeat 1 145 0 2 1341 1158 66 0 0 chr13 99131871 99132023 -21152289 + (TTTC)n Simple_repeat Simple_repeat 4 155 0 2 1341 622 196 120 0 chr13 99132142 99132275 -21152037 - B3 SINE B2 -7 209 61 2 1341 276 255 0 0 chr13 99132762 99132813 -21151499 + ID4 SINE ID 2 52 -31 2 1341 217 244 0 0 chr13 99133611 99133656 -21150656 + T-rich Low_complexity Low_complexity 5 49 0 2 1341 28 29 0 0 chr13 99134788 99134823 -21149489 + AT_rich Low_complexity Low_complexity 1 35 0 2 1341 708 74 0 0 chr13 99135494 99135589 -21148723 + (TC)n Simple_repeat Simple_repeat 2 96 0 2 1341 315 0 0 0 chr13 99137376 99137411 -21146901 + (TTCC)n Simple_repeat Simple_repeat 3 37 0 2 1341 233 277 121 21 chr13 99138447 99138587 -21145725 - L1ME3 LINE L1 -132 6030 5877 2 1341 22 0 0 0 chr13 99139627 99139649 -21144663 + AT_rich Low_complexity Low_complexity 1 22 0 2 1341 870 123 0 8 chr13 99139707 99139838 -21144474 - B3 SINE B2 -86 130 1 2 1341 723 208 12 6 chr13 99139838 99139993 -21144319 + RSINE1 SINE B4 10 165 0 2 1341 603 261 92 32 chr13 99140010 99140283 -21144029 + L1ME2z LINE L1 5455 5745 -614 2 1341 1221 96 0 0 chr13 99140283 99140461 -21143851 + (GGGAGA)n Simple_repeat Simple_repeat 1 178 0 3 1341 603 254 206 56 chr13 99140461 99140609 -21143703 + L1ME2z LINE L1 5746 5934 -510 2 1341 1134 187 19 38 chr13 99140618 99140829 -21143483 - B3 SINE B2 -7 209 3 3 1341 308 284 143 57 chr13 99140832 99141009 -21143303 + L1ME2z LINE L1 5933 6134 -225 2 1341 812 78 13 40 chr13 99141009 99141050 -21143262 + (CA)n Simple_repeat Simple_repeat 1 41 -188 3 1341 812 78 13 40 chr13 99141059 99141245 -21143067 + (CA)n Simple_repeat Simple_repeat 42 229 0 3 1341 308 284 143 57 chr13 99141245 99141266 -21143046 + L1ME2z LINE L1 6140 6159 -200 2 1341 297 172 0 0 chr13 99141266 99141330 -21142982 + (CATA)n Simple_repeat Simple_repeat 3 66 0 3 1341 319 262 92 55 chr13 99141552 99141661 -21142651 + PB1D7 SINE Alu 1 113 -7 3 1341 368 280 71 57 chr13 99141699 99141797 -21142515 + MLT1A1 LTR MaLR 255 360 -48 3 1341 630 26 0 0 chr13 99141797 99141873 -21142439 + (TTTTG)n Simple_repeat Simple_repeat 1 76 0 3 1341 1008 98 0 0 chr13 99141873 99142006 -21142306 - B1_Mus2 SINE Alu -13 134 2 3 1341 368 280 71 57 chr13 99142006 99142046 -21142266 + MLT1A1 LTR MaLR 361 395 -13 3 1341 471 252 70 16 chr13 99142833 99142962 -21141350 - B1F SINE Alu -11 138 3 3 1341 1217 173 13 31 chr13 99143005 99143232 -21141080 + URR1B DNA MER1_type 2 224 -1 3 1341 278 362 112 25 chr13 99144253 99144531 -21139781 - L2c LINE L2 -4 3383 3082 3 1341 261 75 0 0 chr13 99144894 99144934 -21139378 + (TC)n Simple_repeat Simple_repeat 2 41 0 3 1341 294 250 54 54 chr13 99144950 99145043 -21139269 - PB1D9 SINE Alu 0 120 28 3 1341 486 0 0 0 chr13 99145347 99145401 -21138911 + (TC)n Simple_repeat Simple_repeat 1 54 0 3 1341 411 21 0 0 chr13 99145401 99145448 -21138864 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1341 817 161 0 0 chr13 99145450 99145574 -21138738 - B1_Mur3 SINE Alu -17 132 9 3 1341 327 183 9 147 chr13 99145478 99145587 -21138725 - MT2B LTR ERVL -344 257 164 3 1341 678 161 54 0 chr13 99145642 99145754 -21138558 - B3 SINE B2 -85 131 14 3 1341 673 126 0 0 chr13 99145745 99145840 -21138472 + B1_Mus2 SINE Alu 45 139 -8 3 1341 639 87 0 0 chr13 99145849 99145953 -21138359 + (GA)n Simple_repeat Simple_repeat 1 104 0 3 1341 216 333 75 9 chr13 99146085 99146100 -21138212 - PB1D7 SINE Alu -7 113 4 3 1341 247 307 45 0 chr13 99146100 99146188 -21138124 - ID_B1 SINE B4 -48 176 85 3 1341 402 211 0 13 chr13 99146304 99146381 -21137931 - B1_Mus1 SINE Alu -72 76 1 3 1341 292 233 91 64 chr13 99146381 99146422 -21137890 - B4 SINE B4 -209 83 40 3 1341 186 289 37 93 chr13 99146575 99146682 -21137630 - MIRm SINE MIR -59 217 117 3 1341 205 300 111 11 chr13 99146652 99146752 -21137560 - MIRc SINE MIR -120 148 40 3 1341 1096 246 0 10 chr13 99146978 99147187 -21137125 + B3 SINE B2 7 213 -3 3 1341 882 136 208 6 chr13 99147623 99147801 -21136511 + B3 SINE B2 3 216 0 3 1341 351 354 126 14 chr13 99148702 99148917 -21135395 - MIRb SINE MIR -7 261 23 3 1341 333 0 0 0 chr13 99149077 99149114 -21135198 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1341 183 80 0 0 chr13 99149314 99149339 -21134973 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3 1341 607 251 34 68 chr13 99149340 99149545 -21134767 - B3A SINE B2 0 198 1 3 1341 360 203 16 0 chr13 99149825 99149889 -21134423 + ID4 SINE ID 6 70 -13 3 1341 1553 208 20 69 chr13 99149980 99150161 -21134151 - ORR1C1 LTR MaLR 0 378 205 3 1341 1260 104 21 16 chr13 99150161 99150347 -21133965 + B2_Mm2 SINE B2 2 188 -7 3 1341 1553 208 20 69 chr13 99150347 99150512 -21133800 - ORR1C1 LTR MaLR -174 204 49 3 1341 2307 205 116 16 chr13 99150517 99150607 -21133705 - RLTR20B1 LTR ERVK -2 561 470 3 1341 408 20 0 0 chr13 99150607 99150656 -21133656 + (CA)n Simple_repeat Simple_repeat 2 50 0 3 1341 2307 205 116 16 chr13 99150656 99151075 -21133237 - RLTR20B1 LTR ERVK -94 469 3 3 1341 410 141 14 0 chr13 99151075 99151128 -21133184 - ORR1C1 LTR MaLR -323 55 2 3 1341 562 256 98 6 chr13 99151271 99151444 -21132868 - MER5A DNA MER1_type 0 189 1 3 1341 1311 240 59 16 chr13 99151480 99151802 -21132510 - ORR1E LTR MaLR 0 359 24 3 1341 764 281 117 10 chr13 99151965 99152263 -21132049 - L1M2 LINE L1 -673 5624 5295 3 1341 423 98 0 0 chr13 99152281 99152342 -21131970 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 1341 414 0 0 0 chr13 99152344 99152390 -21131922 + (CA)n Simple_repeat Simple_repeat 1 46 0 3 1341 554 338 69 45 chr13 99152669 99152960 -21131352 + MLT1F2 LTR MaLR 263 560 0 3 1341 838 247 14 11 chr13 99153147 99153349 -21130963 - B3A SINE B2 -21 195 2 3 1341 314 238 48 32 chr13 99154781 99154907 -21129405 + L1MA4 LINE L1 6067 6194 -106 3 1341 461 274 35 17 chr13 99154907 99155022 -21129290 + B1F SINE Alu 27 143 -6 3 1341 464 191 22 0 chr13 99155106 99155195 -21129117 + RSINE1 SINE B4 3 93 -72 3 1341 286 239 11 11 chr13 99155327 99155420 -21128892 + GA-rich Low_complexity Low_complexity 3 95 0 3 1341 1193 61 18 0 chr13 99155426 99155591 -21128721 + (GGAGAA)n Simple_repeat Simple_repeat 3 170 0 3 1341 1501 6 0 11 chr13 99155591 99155771 -21128541 + (GAA)n Simple_repeat Simple_repeat 3 180 0 3 1341 239 264 69 0 chr13 99156232 99156304 -21128008 - ID4_ SINE ID -2 81 5 3 1341 2053 174 16 13 chr13 99156355 99156728 -21127584 + ORR1D1 LTR MaLR 1 374 0 3 1341 223 214 0 0 chr13 99157036 99157078 -21127234 + ID4 SINE ID 2 43 -40 3 1341 183 42 0 0 chr13 99157087 99157111 -21127201 + (GGAA)n Simple_repeat Simple_repeat 4 27 0 3 1341 349 300 85 20 chr13 99157111 99157264 -21127048 + HAL1-3A_ME LINE L1 2284 2446 -412 3 1341 255 336 91 0 chr13 99157446 99157556 -21126756 + MIR SINE MIR 61 180 -82 3 1341 302 129 60 18 chr13 99157688 99157854 -21126458 + (TA)n Simple_repeat Simple_repeat 2 174 0 3 1341 23 54 0 0 chr13 99157854 99157891 -21126421 + AT_rich Low_complexity Low_complexity 1 37 0 3 1341 900 254 29 15 chr13 99157897 99158101 -21126211 - B3 SINE B2 0 216 10 3 1341 546 184 18 11 chr13 99158267 99158384 -21125928 + MLT1A1 LTR MaLR 275 396 -12 3 1341 860 163 0 0 chr13 99158663 99158798 -21125514 - B1_Mus2 SINE Alu -12 135 1 3 1341 788 321 99 0 chr13 99158813 99159106 -21125206 + MLT1A LTR MaLR 31 352 -22 3 1341 513 47 0 0 chr13 99160111 99160175 -21124137 + (TC)n Simple_repeat Simple_repeat 2 65 0 3 1341 23 54 0 0 chr13 99161116 99161153 -21123159 + GC_rich Low_complexity Low_complexity 1 37 0 3 1341 339 273 0 0 chr13 99164268 99164345 -21119967 + B4 SINE B4 209 285 -7 3 1341 384 22 0 0 chr13 99164370 99164415 -21119897 + (TC)n Simple_repeat Simple_repeat 1 45 0 3 1341 1554 43 0 21 chr13 99164558 99164747 -21119565 + B2_Mm1t SINE B2 2 186 -7 3 1341 249 125 68 0 chr13 99165027 99165115 -21119197 + (TAGA)n Simple_repeat Simple_repeat 2 95 0 3 1341 438 276 39 82 chr13 99165320 99165544 -21118768 + ID_B1 SINE B4 2 216 -8 3 1341 309 51 0 0 chr13 99165544 99165583 -21118729 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 3 1341 869 230 10 50 chr13 99165593 99165794 -21118518 + B3A SINE B2 6 198 0 3 1341 619 303 108 32 chr13 99166084 99166333 -21117979 + RMER21B LTR ERV1 300 567 -275 3 1341 239 279 0 68 chr13 99166349 99166422 -21117890 + RMER21B LTR ERV1 768 835 -112 3 1341 417 54 0 0 chr13 99166537 99166593 -21117719 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1341 502 176 109 23 chr13 99166593 99166721 -21117591 - B3A SINE B2 -59 139 1 3 1341 583 296 80 10 chr13 99167539 99167740 -21116572 + MLT1J LTR MaLR 4 218 -294 3 1341 3536 23 2 0 chr13 99168253 99168648 -21115664 - MTA_Mm LTR MaLR 0 396 1 3 1341 2766 297 122 32 chr13 99168704 99168751 -21115561 + Lx8 LINE L1 6097 6145 -1328 3 1341 1074 133 194 0 chr13 99168751 99168931 -21115381 + B3 SINE B2 2 216 0 3 1341 2766 297 122 32 chr13 99168931 99170145 -21114167 + Lx8 LINE L1 6146 7471 -2 3 1341 827 133 62 8 chr13 99170190 99170319 -21113993 + B1_Mur3 SINE Alu 2 137 -12 3 1341 241 333 0 0 chr13 99170471 99170528 -21113784 + tRNA-Ala-GCA tRNA tRNA 2 58 -17 3 1341 576 64 32 0 chr13 99170528 99170622 -21113690 + (TATAA)n Simple_repeat Simple_repeat 3 99 0 3 1341 1321 258 30 166 chr13 99170940 99171257 -21113055 + RMER19C LTR ERVK 1 294 -317 3 1341 306 0 0 0 chr13 99171257 99171291 -21113021 + (CA)n Simple_repeat Simple_repeat 1 34 0 3 1341 1321 258 30 166 chr13 99171291 99171680 -21112632 + RMER19C LTR ERVK 295 610 -1 3 1341 338 265 237 41 chr13 99173111 99173374 -21110938 + MLT2B4 LTR ERVL 73 387 -169 3 1341 242 329 111 68 chr13 99173551 99173786 -21110526 + L3b LINE CR1 46 290 -192 3 1341 245 367 65 43 chr13 99173791 99173976 -21110336 - MER5A DNA MER1_type 0 189 1 3 1341 312 311 47 47 chr13 99174249 99174421 -21109891 - RMER15 LTR ERVL -68 507 336 3 1341 448 270 44 167 chr13 99174737 99174964 -21109348 + MLT1B LTR MaLR 192 390 0 3 1341 227 31 31 0 chr13 99175062 99175094 -21109218 + (TTTG)n Simple_repeat Simple_repeat 3 35 0 3 1341 847 163 7 0 chr13 99175095 99175230 -21109082 - B1_Mus2 SINE Alu -11 136 1 3 1341 211 273 23 0 chr13 99175372 99175416 -21108896 + ID4_ SINE ID 28 72 -11 3 1341 1250 109 10 42 chr13 99176572 99176764 -21107548 - B2_Mm1t SINE B2 -7 186 1 3 1341 432 0 0 0 chr13 99177633 99177681 -21106631 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1341 1249 112 16 5 chr13 99178045 99178234 -21106078 - B2_Mm2 SINE B2 -2 193 3 3 1341 279 338 0 0 chr13 99178433 99178507 -21105805 - PB1D10 SINE Alu -43 74 1 3 1341 222 250 115 35 chr13 99178516 99178603 -21105709 - MIR SINE MIR -68 140 47 3 1341 265 176 0 42 chr13 99179849 99179920 -21104392 + G-rich Low_complexity Low_complexity 2 69 0 3 1341 317 283 63 48 chr13 99179920 99180046 -21104266 + HAL1-3A_ME LINE L1 2285 2412 -446 3 1341 299 214 63 158 chr13 99180160 99180187 -21104125 - PB1D7 SINE Alu -10 139 73 3 1341 385 220 178 10 chr13 99180187 99180288 -21104024 - ID_B1 SINE B4 -1 223 106 3 1341 299 214 63 158 chr13 99180288 99180313 -21103999 - PB1D7 SINE Alu -10 72 5 3 1341 285 232 24 0 chr13 99180320 99180402 -21103910 - L1MD3 LINE L1 -95 7900 7817 4 1341 425 291 87 49 chr13 99180426 99180446 -21103866 - B3A SINE B2 -1 197 178 4 1341 207 0 0 0 chr13 99180446 99180469 -21103843 + (TCTG)n Simple_repeat Simple_repeat 4 26 0 4 1341 561 291 87 49 chr13 99180469 99180632 -21103680 - B3 SINE B2 -21 177 7 4 1341 808 140 5 38 chr13 99180653 99180838 -21103474 + CT-rich Low_complexity Low_complexity 1 179 0 4 1341 432 273 0 0 chr13 99180822 99180954 -21103358 + C-rich Low_complexity Low_complexity 6 137 0 4 1341 434 292 163 23 chr13 99180999 99181300 -21103012 - L1MD3 LINE L1 -185 7810 7468 4 1341 254 284 54 43 chr13 99181547 99181639 -21102673 - MIRc SINE MIR -173 95 3 4 1341 189 0 0 0 chr13 99182047 99182068 -21102244 + (C)n Simple_repeat Simple_repeat 1 21 0 4 1341 1407 274 53 3 chr13 99182410 99182728 -21101584 - ORR1D2 LTR MaLR -10 360 27 4 1341 793 235 84 16 chr13 99183948 99184138 -21100174 + B3 SINE B2 3 205 -11 4 1341 327 25 0 0 chr13 99184242 99184282 -21100030 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1341 921 319 104 24 chr13 99184741 99185204 -21099108 - MERVL_2A-int LTR ERVL -1126 4635 4136 4 1341 405 0 0 0 chr13 99185785 99185830 -21098482 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1341 831 151 43 0 chr13 99185841 99185980 -21098332 - B3A SINE B2 -53 145 1 4 1341 726 215 0 0 chr13 99186189 99186319 -21097993 - B3 SINE B2 -86 130 1 4 1341 282 319 94 24 chr13 99186547 99186699 -21097613 + MIR3 SINE MIR 1 155 -53 4 1341 607 310 49 0 chr13 99186817 99187020 -21097292 + ID_B1 SINE B4 1 213 -11 4 1341 198 0 0 0 chr13 99187039 99187061 -21097251 + (CAAAC)n Simple_repeat Simple_repeat 3 24 0 4 1341 240 302 19 19 chr13 99187266 99187374 -21096938 + L2a LINE L2 3319 3426 0 4 1341 195 129 0 0 chr13 99187375 99187406 -21096906 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 4 1341 467 250 39 0 chr13 99188309 99188413 -21095899 + PB1D10 SINE Alu 4 111 -6 4 1341 3522 25 2 0 chr13 99188442 99188837 -21095475 + MTA_Mm LTR MaLR 1 396 0 4 1341 9822 15 2 0 chr13 99188837 99189933 -21094379 + MTA_Mm-int LTR MaLR 1 1098 0 4 1341 3522 25 2 0 chr13 99189933 99190328 -21093984 + MTA_Mm LTR MaLR 1 396 0 4 1341 741 79 0 0 chr13 99190345 99190446 -21093866 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 4 1341 2126 107 58 39 chr13 99191650 99192009 -21092303 + RLTR9A LTR ERVK 3 368 0 4 1341 233 321 97 35 chr13 99192293 99192406 -21091906 + MTE2b LTR MaLR 246 365 -14 4 1341 387 0 0 0 chr13 99192690 99192733 -21091579 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1341 640 273 0 32 chr13 99192737 99192892 -21091420 - RSINE1 SINE B4 -14 151 2 4 1341 401 320 50 11 chr13 99194610 99194775 -21089537 - MLT1F LTR MaLR -7 584 414 4 1341 811 297 87 22 chr13 99194769 99195044 -21089268 - MLT1F LTR MaLR -255 293 1 4 1341 259 289 21 53 chr13 99195520 99195615 -21088697 - MLT1L LTR MaLR -199 411 320 4 1341 909 172 0 0 chr13 99195624 99195804 -21088508 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1341 209 214 0 0 chr13 99195806 99195848 -21088464 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 4 1341 766 178 0 22 chr13 99195848 99196032 -21088280 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1341 834 181 6 0 chr13 99196070 99196415 -21087897 + (TG)n Simple_repeat Simple_repeat 1 347 0 4 1341 316 331 75 37 chr13 99196476 99196940 -21087372 - HAL1 LINE L1 -856 1651 1170 4 1341 199 288 17 17 chr13 99197417 99197477 -21086835 - MIRc SINE MIR -127 141 82 4 1341 809 216 98 21 chr13 99197742 99197817 -21086495 - B3 SINE B2 -7 209 133 4 1341 2019 98 12 67 chr13 99197817 99198158 -21086154 + RLTRETN_Mm LTR ERVK 1 322 0 4 1341 809 216 98 21 chr13 99198158 99198276 -21086036 - B3 SINE B2 -84 132 1 4 1341 22 94 0 0 chr13 99199208 99199272 -21085040 + AT_rich Low_complexity Low_complexity 1 64 0 4 1341 22 35 0 0 chr13 99202052 99202081 -21082231 + AT_rich Low_complexity Low_complexity 1 29 0 4 1341 305 224 9 22 chr13 99202880 99203112 -21081200 + (CA)n Simple_repeat Simple_repeat 1 228 0 4 1341 523 191 13 0 chr13 99203149 99203301 -21081011 + (CA)n Simple_repeat Simple_repeat 2 155 0 4 1341 485 284 0 0 chr13 99203878 99203994 -21080318 - PB1D10 SINE Alu -1 116 1 4 1341 385 229 35 60 chr13 99205924 99206040 -21078272 - PB1D7 SINE Alu -6 114 2 4 1341 921 237 5 19 chr13 99206463 99206678 -21077634 + B3 SINE B2 1 212 -4 4 1341 363 23 0 0 chr13 99207415 99207459 -21076853 + (T)n Simple_repeat Simple_repeat 1 44 0 4 1341 417 243 86 19 chr13 99207879 99207984 -21076328 + B4 SINE B4 181 292 0 4 1341 196 288 121 0 chr13 99209024 99209090 -21075222 + MER5A DNA MER1_type 108 181 -8 4 1341 268 250 50 0 chr13 99209794 99209854 -21074458 - PB1D7 SINE Alu -10 110 48 4 1341 297 51 0 0 chr13 99210742 99210781 -21073531 + (GGGGA)n Simple_repeat Simple_repeat 5 43 0 4 1341 1604 241 24 24 chr13 99212233 99212612 -21071700 + MTE2a LTR MaLR 1 379 0 4 1341 495 321 147 28 chr13 99213097 99213382 -21070930 + ORR1E LTR MaLR 41 359 0 4 1341 920 217 85 0 chr13 99213516 99213705 -21070607 + B3 SINE B2 2 206 -10 4 1341 3858 147 56 17 chr13 99213809 99214473 -21069839 - RLTR17 LTR ERVK 0 692 3 4 1341 377 283 266 4 chr13 99214738 99214997 -21069315 + L1MB7 LINE L1 5636 5962 -216 4 1341 211 186 22 44 chr13 99215097 99215142 -21069170 + ID4 SINE ID 1 44 -39 4 1341 796 161 51 7 chr13 99218364 99218502 -21065810 + B1_Mm SINE Alu 3 146 -1 4 1341 1233 41 7 0 chr13 99218597 99218742 -21065570 + B1_Mus1 SINE Alu 2 147 -1 4 1341 21 36 0 0 chr13 99219032 99219060 -21065252 + AT_rich Low_complexity Low_complexity 1 28 0 4 1341 1153 95 0 0 chr13 99219189 99219337 -21064975 + B1_Mus1 SINE Alu 1 148 0 4 1341 499 287 52 0 chr13 99219399 99219535 -21064777 - L2 LINE L2 -758 2661 2519 4 1341 807 133 0 45 chr13 99219636 99219770 -21064542 - B1_Mus1 SINE Alu -20 128 1 4 1341 386 202 0 139 chr13 99219667 99219782 -21064530 - MT2B LTR ERVL -346 255 157 4 1341 213 308 281 8 chr13 99220180 99220553 -21063759 - L2 LINE L2 -1607 1812 1338 4 1341 367 350 150 24 chr13 99220996 99221335 -21062977 - L2 LINE L2 -2796 623 242 4 1342 2315 191 63 99 chr13 99221617 99222251 -21062061 + RMER19C LTR ERVK 1 611 0 4 1342 609 285 98 33 chr13 99222363 99222700 -21061612 - L1MC1 LINE L1 -280 6053 5695 4 1342 335 232 73 0 chr13 99222726 99222808 -21061504 - L1MC1 LINE L1 -704 5640 5553 4 1342 641 230 108 0 chr13 99222817 99222956 -21061356 + RSINE1 SINE B4 5 158 -7 4 1342 232 258 16 0 chr13 99222973 99223035 -21061277 + (CA)n Simple_repeat Simple_repeat 2 64 0 4 1342 21 0 0 0 chr13 99223048 99223069 -21061243 + AT_rich Low_complexity Low_complexity 1 21 0 4 1342 1131 315 92 29 chr13 99225602 99226268 -21058044 - L1MB7 LINE L1 -13 6171 5464 4 1342 1993 225 16 51 chr13 99226269 99226760 -21057552 - RMER19C LTR ERVK 0 611 138 4 1342 370 246 43 26 chr13 99226792 99226909 -21057403 - L1M4 LINE L1 -690 6334 6216 4 1342 216 0 0 0 chr13 99226920 99226944 -21057368 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4 1342 1158 56 14 0 chr13 99226948 99227092 -21057220 - B1_Mus2 SINE Alu -1 146 1 4 1342 522 275 109 32 chr13 99227129 99227152 -21057160 - L1M4 LINE L1 -784 6222 6196 4 1342 1076 233 9 0 chr13 99227152 99227362 -21056950 - B3 SINE B2 -1 215 4 4 1342 522 275 109 32 chr13 99227362 99227714 -21056598 - L1M4 LINE L1 -811 6195 5819 4 1342 910 223 139 37 chr13 99227768 99228196 -21056116 + L1M2 LINE L1 4976 5472 -828 4 1342 531 0 0 0 chr13 99228196 99228255 -21056057 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1342 560 198 200 80 chr13 99228255 99228275 -21056037 + L1M2 LINE L1 5473 5485 -815 4 1342 745 87 17 0 chr13 99228275 99228390 -21055922 + (GAAAA)n Simple_repeat Simple_repeat 4 120 0 4 1342 560 198 200 80 chr13 99228390 99228472 -21055840 + L1M2 LINE L1 5486 5561 -739 4 1342 970 203 0 27 chr13 99228488 99228675 -21055637 + B3A SINE B2 2 183 -15 4 1342 244 306 26 61 chr13 99228762 99228877 -21055435 - PB1D7 SINE Alu -7 113 3 4 1342 734 241 97 29 chr13 99228877 99228950 -21055362 - B4A SINE B4 -207 85 1 4 1342 938 279 96 49 chr13 99228989 99229580 -21054732 - L1M4 LINE L1 -1969 5037 4419 4 1342 240 273 26 13 chr13 99229565 99229643 -21054669 - Lx8 LINE L1 0 7473 7395 4 1342 297 296 70 26 chr13 99229768 99229997 -21054315 - L1M4 LINE L1 -3747 3259 3021 4 1342 302 290 90 70 chr13 99230078 99230234 -21054078 - HAL1-3A_ME LINE L1 -727 2131 1973 4 1342 781 277 63 35 chr13 99230237 99230253 -21054059 - B4A SINE B4 0 292 277 4 1342 261 0 0 0 chr13 99230253 99230282 -21054030 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1342 781 277 63 35 chr13 99230282 99230549 -21053763 - B4A SINE B4 -16 276 1 4 1342 363 307 78 25 chr13 99230580 99230824 -21053488 - L1M4 LINE L1 -4183 2825 2569 4 1342 317 259 12 36 chr13 99230847 99230931 -21053381 - L1M4 LINE L1 -4559 2449 2368 4 1342 360 0 0 0 chr13 99231135 99231175 -21053137 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 4 1342 368 272 81 69 chr13 99231175 99231498 -21052814 + L1M2 LINE L1 5161 5419 -461 4 1342 804 267 27 0 chr13 99231506 99231693 -21052619 + B3 SINE B2 1 192 -24 4 1342 600 14 0 0 chr13 99231693 99231762 -21052550 + (TG)n Simple_repeat Simple_repeat 1 69 0 4 1342 1077 288 56 53 chr13 99231877 99232233 -21052079 - ORR1D2 LTR MaLR -1 369 13 4 1342 516 256 77 18 chr13 99232472 99232750 -21051562 - L1M4 LINE L1 -5222 2112 1820 4 1342 811 301 18 18 chr13 99232826 99233049 -21051263 + MLT2B3 LTR ERVL 1 223 -331 4 1342 660 292 25 30 chr13 99233100 99233298 -21051014 + MTD LTR MaLR 5 201 -218 4 1342 1188 193 157 4 chr13 99233304 99233559 -21050753 - MTD LTR MaLR 0 419 126 4 1342 30648 56 1 0 chr13 99233563 99238137 -21046175 - L1Md_F2 LINE L1 0 6582 2006 4 1342 516 282 8 22 chr13 99238138 99238272 -21046040 - MTD LTR MaLR -286 133 2 4 1342 510 243 27 41 chr13 99238309 99238455 -21045857 + MTD LTR MaLR 272 415 -4 4 1342 21 36 0 0 chr13 99238531 99238559 -21045753 + AT_rich Low_complexity Low_complexity 1 28 0 4 1342 2178 94 32 7 chr13 99238575 99238885 -21045427 + ORR1A3 LTR MaLR 1 318 -8 4 1342 674 307 96 31 chr13 99238900 99239350 -21044962 - L1M4 LINE L1 -5254 1650 1172 4 1342 1050 153 109 33 chr13 99239401 99239611 -21044701 + URR1A DNA MER1_type 1 226 0 4 1342 488 353 58 19 chr13 99239893 99240153 -21044159 - L1M4 LINE L1 -6000 904 635 4 1342 1084 308 47 16 chr13 99240402 99240851 -21043461 + L1ME1 LINE L1 5484 5946 -233 4 1342 866 134 28 7 chr13 99241376 99241519 -21042793 + B1_Mus1 SINE Alu 1 146 -2 4 1342 339 276 129 8 chr13 99242469 99242593 -21041719 + B3 SINE B2 9 147 -69 4 1342 337 234 43 82 chr13 99242496 99242775 -21041537 + RMER17D LTR ERVK 206 473 -416 4 1342 26 0 0 0 chr13 99242794 99242820 -21041492 + AT_rich Low_complexity Low_complexity 1 26 0 4 1342 808 271 67 13 chr13 99243547 99243771 -21040541 - B4A SINE B4 -21 271 36 4 1342 702 280 198 6 chr13 99243832 99244155 -21040157 + MLT1B LTR MaLR 1 385 -5 4 1342 253 272 111 0 chr13 99244180 99244261 -21040051 - MIRb SINE MIR -49 219 130 4 1342 325 256 50 85 chr13 99244567 99244708 -21039604 + MLT1B LTR MaLR 17 152 -353 5 1342 555 16 0 0 chr13 99244740 99244804 -21039508 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 1342 364 306 159 17 chr13 99244808 99244984 -21039328 + MLT1B LTR MaLR 190 390 0 5 1342 583 291 36 59 chr13 99245091 99245310 -21039002 + B4A SINE B4 43 256 -36 5 1342 923 135 6 0 chr13 99245348 99245504 -21038808 + (GA)n Simple_repeat Simple_repeat 1 157 0 5 1342 699 93 25 0 chr13 99246002 99246120 -21038192 + (GA)n Simple_repeat Simple_repeat 2 122 0 5 1342 258 81 0 0 chr13 99246436 99246473 -21037839 + (TCTCCC)n Simple_repeat Simple_repeat 2 38 0 5 1342 744 126 0 0 chr13 99247471 99247590 -21036722 + (GGA)n Simple_repeat Simple_repeat 3 121 0 5 1342 211 314 151 8 chr13 99248318 99248437 -21035875 - MIRc SINE MIR -4 264 129 5 1342 185 333 29 14 chr13 99248443 99248513 -21035799 - L2b LINE L2 -55 3320 3250 5 1342 1186 151 89 42 chr13 99249073 99249287 -21035025 + URR1B DNA MER1_type 2 225 0 5 1342 192 304 95 29 chr13 99249354 99249459 -21034853 - MIRm SINE MIR -126 150 39 5 1342 216 332 62 11 chr13 99249752 99249868 -21034444 + MIRb SINE MIR 25 151 -117 5 1342 314 24 119 0 chr13 99250650 99250734 -21033578 + (TCCC)n Simple_repeat Simple_repeat 1 94 0 5 1342 285 278 0 27 chr13 99250747 99250821 -21033491 + polypyrimidine Low_complexity Low_complexity 3 74 0 5 1342 405 156 0 0 chr13 99251107 99251184 -21033128 + (TATG)n Simple_repeat Simple_repeat 3 79 0 5 1342 909 205 242 17 chr13 99251527 99251829 -21032483 - ORR1D1 LTR MaLR 0 374 5 5 1342 682 278 72 53 chr13 99252024 99252499 -21031813 + L1MDa LINE L1 1203 1686 -4947 5 1342 395 330 18 0 chr13 99252501 99252610 -21031702 + B3 SINE B2 106 216 0 5 1342 498 280 112 4 chr13 99252611 99252862 -21031450 + L1MDa LINE L1 2625 2902 -3635 5 1342 767 203 181 94 chr13 99252927 99253096 -21031216 + Lx7 LINE L1 7271 7417 -279 5 1342 366 23 0 0 chr13 99253096 99253139 -21031173 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1342 767 203 181 94 chr13 99253139 99253252 -21031060 + Lx7 LINE L1 7418 7590 -106 5 1342 721 232 7 0 chr13 99253252 99253390 -21030922 + B1_Mur2 SINE Alu 2 140 -9 5 1342 767 203 181 94 chr13 99253390 99253498 -21030814 + Lx7 LINE L1 7591 7696 0 5 1342 2505 98 76 3 chr13 99253899 99254266 -21030046 + ORR1B1 LTR MaLR 1 394 0 5 1342 405 0 0 0 chr13 99254739 99254784 -21029528 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1342 242 231 19 0 chr13 99255106 99255158 -21029154 + B4 SINE B4 81 133 -159 5 1342 394 217 196 0 chr13 99255118 99255210 -21029102 + PB1D10 SINE Alu 8 117 0 5 1342 1227 159 33 5 chr13 99257265 99257480 -21026832 + URR1B DNA MER1_type 5 225 0 5 1342 1185 41 14 7 chr13 99257823 99257969 -21026343 + B1_Mm SINE Alu 1 147 0 5 1342 771 225 16 78 chr13 99258320 99258513 -21025799 - B3A SINE B2 -4 194 14 5 1342 641 211 56 82 chr13 99258832 99259028 -21025284 - B3A SINE B2 -3 195 5 5 1342 457 269 16 93 chr13 99261104 99261362 -21022950 + L1ME2 LINE L1 5712 5949 -215 5 1342 324 0 0 0 chr13 99261680 99261716 -21022596 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 5 1342 222 171 0 0 chr13 99263383 99263424 -21020888 + (TCTG)n Simple_repeat Simple_repeat 4 44 0 5 1342 279 267 0 16 chr13 99263529 99263590 -21020722 + B1F SINE Alu 78 137 -12 5 1342 232 282 142 28 chr13 99264341 99264447 -21019865 + MIR3 SINE MIR 44 161 -47 5 1342 229 308 19 0 chr13 99264727 99264779 -21019533 + MER45R DNA Tip100 1514 1566 -15 5 1342 1620 44 0 0 chr13 99264929 99265973 -21018339 + (TG)n Simple_repeat Simple_repeat 1 1044 0 5 1342 414 270 150 7 chr13 99266075 99266228 -21018084 + B3A SINE B2 3 177 -21 5 1342 413 50 17 0 chr13 99266228 99266288 -21018024 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 5 1342 392 97 16 0 chr13 99266450 99266512 -21017800 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1342 254 359 130 15 chr13 99266558 99266732 -21017580 - MIR3 SINE MIR -15 193 4 5 1342 333 333 50 0 chr13 99268394 99268493 -21015819 + U6 snRNA snRNA 3 106 -1 5 1342 185 250 58 0 chr13 99269059 99269111 -21015201 + MER5B DNA MER1_type 4 58 -120 5 1342 533 326 71 18 chr13 99269173 99269398 -21014914 + Tigger5 DNA MER2_type 4 240 -2166 5 1342 246 246 96 43 chr13 99269384 99269499 -21014813 + Tigger5 DNA MER2_type 2282 2402 -4 5 1342 1364 162 9 0 chr13 99270438 99270660 -21013652 - URR1B DNA MER1_type -1 224 1 5 1342 242 257 39 39 chr13 99270675 99270752 -21013560 - MER5B DNA MER1_type -92 86 10 5 1342 618 26 0 0 chr13 99274564 99274640 -21009672 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 1342 221 257 0 28 chr13 99276752 99276824 -21007488 + (TTGG)n Simple_repeat Simple_repeat 3 72 0 5 1342 216 0 0 0 chr13 99277205 99277229 -21007083 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5 1342 6329 147 56 40 chr13 99277418 99278952 -21005360 + Lx7 LINE L1 131 1687 -4193 5 1342 1487 22 6 0 chr13 99278956 99279135 -21005177 + (GGGTG)n Simple_repeat Simple_repeat 1 180 0 5 1342 1344 215 101 122 chr13 99279139 99279673 -21004639 - RLTR20C LTR ERVK -11 523 1 5 1342 10564 156 105 34 chr13 99279678 99281855 -21002457 + Lx7 LINE L1 1699 4029 -1851 5 1342 2868 143 56 32 chr13 99281855 99282359 -21001953 + RMER20A LTR ERVK 1 516 0 5 1342 8338 142 153 14 chr13 99282360 99282950 -21001362 + Lx7 LINE L1 4024 4622 -1258 5 1342 429 20 0 0 chr13 99282950 99283000 -21001312 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1342 8338 181 96 44 chr13 99283000 99285540 -20998772 + Lx7 LINE L1 4623 7367 -329 5 1342 23 0 0 0 chr13 99285561 99285584 -20998728 + AT_rich Low_complexity Low_complexity 1 23 0 5 1342 303 71 0 0 chr13 99285584 99285626 -20998686 + (CATA)n Simple_repeat Simple_repeat 2 43 0 5 1342 1548 218 0 40 chr13 99285632 99285986 -20998326 + Lx7 LINE L1 7356 7695 -1 5 1342 187 338 12 36 chr13 99286689 99286772 -20997540 - L2a LINE L2 -56 3370 3290 5 1342 360 0 0 0 chr13 99287086 99287126 -20997186 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1342 849 119 0 0 chr13 99287481 99287641 -20996671 + (TCTCCC)n Simple_repeat Simple_repeat 2 161 0 5 1342 282 164 18 0 chr13 99288602 99288657 -20995655 - PB1 SINE Alu -67 60 5 5 1342 285 109 0 0 chr13 99288679 99288725 -20995587 + (T)n Simple_repeat Simple_repeat 1 46 0 5 1342 4439 108 31 8 chr13 99288727 99289397 -20994915 - L1_Mus4 LINE L1 -1 6635 5950 5 1342 255 103 0 0 chr13 99289668 99289707 -20994605 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 5 1342 717 179 13 79 chr13 99289738 99289890 -20994422 + B1_Mur4 SINE Alu 1 142 -8 5 1342 354 123 0 0 chr13 99289890 99289947 -20994365 + (CA)n Simple_repeat Simple_repeat 2 58 0 5 1342 465 327 85 31 chr13 99289998 99290443 -20993869 - L1ME3A LINE L1 -135 6038 5570 5 1342 1062 207 10 5 chr13 99291084 99291293 -20993019 - B3 SINE B2 -6 210 1 5 1342 755 138 12 18 chr13 99292070 99292233 -20992079 + (TAGA)n Simple_repeat Simple_repeat 3 164 0 5 1342 2264 198 39 123 chr13 99292292 99292959 -20991353 + RMER19C LTR ERVK 1 611 0 5 1342 644 252 0 8 chr13 99292959 99293083 -20991229 - B1_Mur1 SINE Alu -23 126 4 5 1342 383 254 84 63 chr13 99295211 99295354 -20988958 - Lx8 LINE L1 -373 7100 6955 5 1342 2919 301 64 60 chr13 99295374 99295688 -20988624 - L1_Mur3 LINE L1 -2443 3437 3127 5 1342 3359 38 112 2 chr13 99295688 99296116 -20988196 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1342 2919 301 64 60 chr13 99296116 99297758 -20986554 - L1_Mur3 LINE L1 -2754 3126 1472 5 1342 3173 45 36 5 chr13 99298103 99298487 -20985825 - MTA_Mm LTR MaLR 0 396 1 5 1342 1581 158 19 8 chr13 99298726 99298987 -20985325 + ORR1B2 LTR MaLR 96 359 -8 5 1342 214 333 0 0 chr13 99299591 99299648 -20984664 - RSINE1 SINE B4 -13 152 96 5 1342 662 312 43 52 chr13 99299638 99299978 -20984334 - MLT2B1 LTR ERVL -21 546 102 5 1342 3034 193 73 19 chr13 99300055 99300849 -20983463 + RMER6C LTR ERVK 1 720 0 5 1342 621 280 78 30 chr13 99301829 99302098 -20982214 - B4A SINE B4 -6 286 5 5 1342 310 351 43 81 chr13 99302264 99302450 -20981862 - MIR SINE MIR -72 190 12 5 1342 396 0 0 0 chr13 99302750 99302794 -20981518 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1342 259 407 0 21 chr13 99303774 99303917 -20980395 - MARNA DNA Mariner -240 346 207 5 1342 415 320 24 71 chr13 99304518 99304686 -20979626 - RMER30 DNA MER1_type -34 168 9 5 1342 240 35 0 0 chr13 99306090 99306119 -20978193 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 5 1342 482 291 15 7 chr13 99306218 99306353 -20977959 - B3A SINE B2 -6 192 57 5 1342 211 189 189 0 chr13 99307029 99307082 -20977230 - B1F SINE Alu 0 149 87 5 1342 383 274 198 0 chr13 99307038 99307144 -20977168 - ID_B1 SINE B4 -16 208 82 5 1342 669 217 0 59 chr13 99307296 99307448 -20976864 - B1_Mur2 SINE Alu -5 144 2 5 1342 228 67 0 0 chr13 99308012 99308042 -20976270 + (A)n Simple_repeat Simple_repeat 1 30 0 5 1342 383 231 32 36 chr13 99308446 99308565 -20975747 - PB1D7 SINE Alu -2 118 2 5 1342 235 354 87 13 chr13 99310083 99310232 -20974080 - MER5A DNA MER1_type 0 189 30 5 1342 301 280 78 29 chr13 99311553 99311656 -20972656 - Tigger16a DNA Tigger -6 927 820 5 1342 1851 140 127 6 chr13 99311669 99311992 -20972320 + ORR1B2 LTR MaLR 2 363 -4 5 1342 426 39 0 0 chr13 99312221 99312273 -20972039 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1342 305 313 193 66 chr13 99312308 99312551 -20971761 - B4 SINE B4 -18 274 1 5 1342 264 362 91 79 chr13 99312559 99312889 -20971423 - L2b LINE L2 -14 3361 3028 5 1342 2376 92 6 3 chr13 99312916 99313242 -20971070 + ORR1A2 LTR MaLR 1 327 0 5 1342 225 0 0 0 chr13 99314557 99314582 -20969730 + (A)n Simple_repeat Simple_repeat 1 25 0 5 1342 201 133 0 0 chr13 99315847 99315877 -20968435 + (AGGGGG)n Simple_repeat Simple_repeat 1 30 0 5 1342 590 173 0 8 chr13 99316812 99316946 -20967366 + (TCCA)n Simple_repeat Simple_repeat 2 134 0 5 1342 303 206 49 0 chr13 99316935 99317037 -20967275 + CT-rich Low_complexity Low_complexity 1 107 0 5 1342 411 323 0 0 chr13 99318281 99318374 -20965938 + PB1D10 SINE Alu 8 100 -17 5 1342 947 125 228 0 chr13 99318680 99318864 -20965448 - URR1A DNA MER1_type 0 226 1 6 1342 2546 80 0 3 chr13 99318874 99319201 -20965111 - ORR1A2 LTR MaLR 0 327 2 6 1342 735 270 130 20 chr13 99319207 99319453 -20964859 - B4A SINE B4 -15 277 5 6 1342 315 313 136 27 chr13 99319754 99319938 -20964374 + MLT1I LTR MaLR 73 276 -135 6 1342 253 306 0 58 chr13 99320981 99321085 -20963227 + MLT1A LTR MaLR 25 122 -252 6 1342 517 226 7 108 chr13 99321914 99322053 -20962259 - MLT1A1 LTR MaLR 0 408 241 6 1342 666 317 119 34 chr13 99322259 99322612 -20961700 + LTR40b LTR ERVL 61 443 -19 6 1342 651 103 0 0 chr13 99322773 99322870 -20961442 + (TATG)n Simple_repeat Simple_repeat 2 98 0 6 1342 999 226 41 0 chr13 99324093 99324288 -20960024 + B3 SINE B2 1 203 -13 6 1342 2237 108 13 0 chr13 99324292 99324606 -20959706 + ORR1A2 LTR MaLR 2 319 -8 6 1342 780 152 8 23 chr13 99324653 99324781 -20959531 - B1_Mus1 SINE Alu -22 126 1 6 1342 217 220 60 0 chr13 99326429 99326479 -20957833 + B1F SINE Alu 96 148 -1 6 1342 231 280 171 28 chr13 99326968 99327185 -20957127 + RMER12 LTR ERVK 710 957 -365 6 1342 334 315 45 86 chr13 99327407 99327427 -20956885 - B4 SINE B4 -51 241 196 6 1342 733 110 44 59 chr13 99327427 99327562 -20956750 - B1_Mur4 SINE Alu 0 150 18 6 1342 334 315 45 86 chr13 99327562 99327629 -20956683 - B4 SINE B4 -51 195 29 6 1342 255 295 331 5 chr13 99328929 99329113 -20955199 + MIRb SINE MIR 17 260 -8 6 1342 473 308 48 32 chr13 99329478 99329726 -20954586 + L1MC3 LINE L1 7190 7441 -344 6 1342 994 234 25 0 chr13 99329741 99329942 -20954370 + B3 SINE B2 1 206 -10 6 1342 352 237 130 0 chr13 99329950 99330081 -20954231 + L1MC3 LINE L1 7461 7608 -177 6 1342 643 164 115 15 chr13 99330102 99330232 -20954080 + B1_Mur2 SINE Alu 2 144 -5 6 1342 225 0 0 0 chr13 99330338 99330363 -20953949 + (TG)n Simple_repeat Simple_repeat 2 26 0 6 1342 245 260 164 77 chr13 99330363 99330546 -20953766 - RMER12 LTR ERVK -471 851 653 6 1342 282 270 34 0 chr13 99330559 99330648 -20953664 + L1MC3 LINE L1 7662 7753 -32 6 1342 265 249 128 14 chr13 99331056 99331155 -20953157 + MIR SINE MIR 46 155 -113 6 1342 483 33 0 0 chr13 99331231 99331292 -20953020 + (CA)n Simple_repeat Simple_repeat 1 61 0 6 1342 293 0 27 0 chr13 99331975 99332012 -20952300 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1342 1363 97 16 0 chr13 99332330 99332516 -20951796 + B2_Mm2 SINE B2 1 189 -6 6 1342 217 0 61 0 chr13 99332706 99332739 -20951573 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 6 1342 1205 35 7 0 chr13 99332744 99332886 -20951426 - B1_Mus1 SINE Alu -5 143 1 6 1342 74 23 0 0 chr13 99333108 99333196 -20951116 + AT_rich Low_complexity Low_complexity 1 88 0 6 1342 180 0 0 0 chr13 99333206 99333226 -20951086 + (TA)n Simple_repeat Simple_repeat 2 21 0 6 1342 429 0 0 0 chr13 99333229 99333279 -20951033 - B2_Mm2 SINE B2 -144 51 2 6 1342 366 263 0 0 chr13 99333288 99333364 -20950948 - ID_B1 SINE B4 -6 218 143 6 1342 849 250 58 24 chr13 99333367 99333572 -20950740 - B3 SINE B2 -3 213 2 6 1342 338 224 66 0 chr13 99333572 99333637 -20950675 - ID_B1 SINE B4 -63 161 92 6 1342 360 0 0 0 chr13 99333639 99333679 -20950633 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 1342 573 162 0 0 chr13 99333767 99333878 -20950434 + CT-rich Low_complexity Low_complexity 2 112 0 6 1342 215 122 0 20 chr13 99334128 99334178 -20950134 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 6 1342 677 211 0 9 chr13 99334633 99334748 -20949564 + PB1D9 SINE Alu 5 118 -2 6 1342 303 178 38 76 chr13 99334839 99334918 -20949394 - L1MD LINE L1 -1540 4606 4531 6 1342 360 250 26 0 chr13 99335221 99335297 -20949015 + ID4_ SINE ID 4 81 -2 6 1342 223 288 24 59 chr13 99335449 99335534 -20948778 - ID4_ SINE ID 0 83 2 6 1342 369 0 0 0 chr13 99335661 99335702 -20948610 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1342 688 264 0 12 chr13 99335704 99335869 -20948443 + Lx9 LINE L1 7180 7342 -302 6 1342 495 0 0 0 chr13 99335880 99335935 -20948377 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1342 401 301 9 0 chr13 99335935 99336048 -20948264 - Lx9 LINE L1 -172 7472 7359 6 1342 2773 262 72 40 chr13 99336159 99337020 -20947292 - Lx9 LINE L1 -456 7188 6300 6 1342 733 338 53 32 chr13 99337206 99337545 -20946767 + LTR79 LTR ERVL 180 525 -2 6 1342 630 263 0 43 chr13 99337600 99337650 -20946662 + RSINE1 SINE B4 3 52 -113 6 1342 2058 192 98 62 chr13 99337650 99338316 -20945996 - RMER6C LTR ERVK 0 690 1 6 1342 630 263 0 43 chr13 99338316 99338404 -20945908 + RSINE1 SINE B4 53 135 -30 6 1342 360 0 0 0 chr13 99338412 99338452 -20945860 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1342 381 335 21 20 chr13 99338588 99338756 -20945556 + B4 SINE B4 113 274 -18 6 1342 336 48 0 0 chr13 99338758 99338800 -20945512 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1342 385 340 27 16 chr13 99339462 99339650 -20944662 + MLT1A LTR MaLR 3 192 -182 6 1342 443 261 29 78 chr13 99339814 99340018 -20944294 - L1MB8 LINE L1 -32 6146 5953 6 1342 699 281 43 105 chr13 99339995 99340669 -20943643 - L1M2 LINE L1 -543 5748 5107 6 1342 28 71 0 0 chr13 99340674 99340730 -20943582 + AT_rich Low_complexity Low_complexity 1 56 0 6 1342 1168 169 5 10 chr13 99341492 99341689 -20942623 + B3 SINE B2 15 210 -6 6 1342 243 0 0 0 chr13 99341790 99341817 -20942495 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 6 1342 180 179 0 0 chr13 99342392 99342431 -20941881 + G-rich Low_complexity Low_complexity 2 40 0 6 1342 222 37 0 0 chr13 99345171 99345198 -20939114 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1342 594 68 0 0 chr13 99345198 99345285 -20939027 + (CAGAGA)n Simple_repeat Simple_repeat 3 90 0 6 1342 299 250 44 9 chr13 99345740 99345853 -20938459 - PB1D10 SINE Alu 0 117 1 6 1342 304 284 52 10 chr13 99346583 99346679 -20937633 - PB1D10 SINE Alu 0 117 18 6 1342 1302 116 5 0 chr13 99346958 99347147 -20937165 + B2_Mm1t SINE B2 2 191 -2 6 1342 794 210 109 16 chr13 99347157 99347183 -20937129 - B3 SINE B2 -13 203 177 6 1342 189 74 0 0 chr13 99347183 99347210 -20937102 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 6 1342 1274 59 1 0 chr13 99347210 99347367 -20936945 - B2_Mm2 SINE B2 -40 176 3 6 1342 277 308 27 58 chr13 99349743 99349881 -20934431 - MLT1A LTR MaLR -30 437 270 6 1342 519 241 58 65 chr13 99349851 99350006 -20934306 - MLT1A LTR MaLR -219 155 2 6 1342 313 299 0 0 chr13 99350156 99350233 -20934079 - B1F SINE Alu -43 106 30 6 1342 236 290 106 61 chr13 99350455 99350587 -20933725 + MLT1A1 LTR MaLR 2 139 -226 6 1342 273 276 38 67 chr13 99350739 99350844 -20933468 + MLT1A1 LTR MaLR 307 408 0 6 1342 329 315 56 66 chr13 99350854 99351051 -20933261 + MLT1F1 LTR MaLR 260 454 -115 6 1342 346 275 0 38 chr13 99351236 99351342 -20932970 + MER33 DNA MER1_type 222 323 -1 6 1342 22 35 0 0 chr13 99351409 99351438 -20932874 + AT_rich Low_complexity Low_complexity 1 29 0 6 1343 661 210 41 27 chr13 99352640 99352787 -20931525 + B1_Mur1 SINE Alu 1 149 0 6 1343 1158 88 0 0 chr13 99352920 99353068 -20931244 + B1_Mus1 SINE Alu 1 148 0 6 1343 327 25 0 0 chr13 99359965 99360005 -20924307 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 6 1343 621 40 0 0 chr13 99360507 99360583 -20923729 + (TC)n Simple_repeat Simple_repeat 1 76 0 6 1343 1393 40 69 0 chr13 99360585 99360759 -20923553 - B2_Mm2 SINE B2 -9 186 1 6 1343 273 385 48 74 chr13 99361826 99362095 -20922217 - Charlie22a DNA MER1_type -92 399 138 6 1343 1679 223 96 23 chr13 99362117 99362553 -20921759 + MLT1D LTR MaLR 19 486 -19 6 1343 563 27 14 0 chr13 99363622 99363695 -20920617 + (TG)n Simple_repeat Simple_repeat 2 75 0 6 1343 469 162 0 15 chr13 99363856 99363988 -20920324 + GA-rich Low_complexity Low_complexity 1 130 0 6 1343 552 268 19 31 chr13 99364683 99364845 -20919467 + RSINE1 SINE B4 1 160 -5 6 1343 857 153 78 50 chr13 99365560 99365739 -20918573 + B2_Mm2 SINE B2 12 195 0 6 1343 1882 216 27 12 chr13 99365841 99366254 -20918058 + MTC LTR MaLR 3 421 0 6 1343 1061 268 7 85 chr13 99366262 99366544 -20917768 + B4A SINE B4 1 260 -32 6 1343 342 0 0 0 chr13 99366570 99366608 -20917704 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1343 187 31 30 30 chr13 99367599 99367632 -20916680 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1343 490 252 69 23 chr13 99368401 99368531 -20915781 + ID_B1 SINE B4 84 219 -5 6 1343 286 206 97 97 chr13 99368540 99368653 -20915659 + MT2B LTR ERVL 145 257 -344 6 1343 657 231 7 14 chr13 99368554 99368699 -20915613 + B1_Mur2 SINE Alu 6 149 0 6 1343 27 0 0 0 chr13 99369036 99369063 -20915249 + AT_rich Low_complexity Low_complexity 1 27 0 6 1343 247 363 48 16 chr13 99369833 99369959 -20914353 + MLT1J2 LTR MaLR 21 150 -298 6 1343 336 277 86 102 chr13 99370006 99370203 -20914109 + MLT1J2 LTR MaLR 253 446 -2 6 1343 305 236 116 30 chr13 99370498 99370617 -20913695 - B1F SINE Alu -2 115 1 6 1343 264 94 113 0 chr13 99371117 99371170 -20913142 - Lx9 LINE L1 -2 7642 7584 6 1343 355 296 0 0 chr13 99371883 99371971 -20912341 + MTEa LTR MaLR 204 291 -88 6 1343 661 222 0 67 chr13 99372021 99372156 -20912156 - RSINE1 SINE B4 -38 127 2 6 1343 327 49 0 0 chr13 99372219 99372260 -20912052 + (CAA)n Simple_repeat Simple_repeat 3 43 0 6 1343 1308 229 65 42 chr13 99372369 99372724 -20911588 + ORR1D2 LTR MaLR 8 370 0 6 1343 235 237 92 0 chr13 99373254 99373330 -20910982 - MER5A1 DNA MER1_type -75 91 9 6 1343 2422 172 18 166 chr13 99374340 99375057 -20909255 - RMER19C LTR ERVK 0 611 1 6 1343 420 135 0 0 chr13 99375147 99375221 -20909091 + (TG)n Simple_repeat Simple_repeat 1 74 0 6 1343 404 295 186 24 chr13 99375231 99375478 -20908834 - B4A SINE B4 -4 288 2 6 1343 271 233 100 0 chr13 99376054 99376114 -20908198 + ID4_ SINE ID 8 73 -10 6 1343 972 26 0 0 chr13 99376438 99376553 -20907759 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 7 1343 688 207 94 171 chr13 99376776 99377085 -20907227 - B4A SINE B4 -6 286 2 7 1343 207 225 0 0 chr13 99377133 99377159 -20907153 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1343 369 0 0 0 chr13 99377159 99377200 -20907112 + (GA)n Simple_repeat Simple_repeat 2 42 0 7 1343 207 225 0 0 chr13 99377200 99377262 -20907050 + (CA)n Simple_repeat Simple_repeat 2 63 0 7 1343 278 299 122 0 chr13 99378784 99378891 -20905421 + MLT1J LTR MaLR 100 219 -293 7 1343 397 263 237 12 chr13 99378902 99378937 -20905375 - B3 SINE B2 -4 212 168 7 1343 258 32 0 0 chr13 99378937 99378968 -20905344 + (TATG)n Simple_repeat Simple_repeat 4 34 0 7 1343 397 263 237 12 chr13 99378968 99379105 -20905207 - B3 SINE B2 -49 167 1 7 1343 575 289 83 37 chr13 99379109 99379325 -20904987 - MER2 DNA MER2_type 0 345 120 7 1343 391 319 101 66 chr13 99379496 99379694 -20904618 + MLT1J LTR MaLR 278 482 -30 7 1343 483 18 0 0 chr13 99379696 99379752 -20904560 + (GA)n Simple_repeat Simple_repeat 1 56 0 7 1343 266 328 0 0 chr13 99379757 99379821 -20904491 + tRNA-Ala-GCY_ tRNA tRNA 5 68 -7 7 1343 22 0 0 0 chr13 99379857 99379879 -20904433 + AT_rich Low_complexity Low_complexity 1 22 0 7 1343 2230 279 64 22 chr13 99379941 99380719 -20903593 + Lx9 LINE L1 6661 7471 -173 7 1343 483 95 0 0 chr13 99380719 99380793 -20903519 + (TG)n Simple_repeat Simple_repeat 1 74 0 7 1343 384 0 54 0 chr13 99380793 99380849 -20903463 + (GA)n Simple_repeat Simple_repeat 2 60 0 7 1343 196 308 19 0 chr13 99381058 99381110 -20903202 - MIRc SINE MIR -163 105 53 7 1343 387 176 53 13 chr13 99381400 99381475 -20902837 + MTC LTR MaLR 3 80 -341 7 1343 736 148 23 0 chr13 99381485 99381613 -20902699 - URR1A DNA MER1_type -15 211 81 7 1343 1932 133 80 8 chr13 99381611 99381957 -20902355 + MTC LTR MaLR 35 421 0 7 1343 851 259 22 56 chr13 99382010 99382280 -20902032 + RLTR11B LTR ERVK 5 265 -188 7 1343 541 268 35 42 chr13 99382359 99382550 -20901762 + RLTR11B LTR ERVK 284 491 -37 7 1343 1148 193 15 10 chr13 99385041 99385240 -20899072 + B3 SINE B2 2 201 -15 7 1343 227 318 35 53 chr13 99385154 99385267 -20899045 + MamGypLTR2 LTR Gypsy 829 939 -250 7 1343 268 328 150 78 chr13 99385356 99385703 -20898609 - MLT1J LTR MaLR -35 477 106 7 1343 267 54 0 0 chr13 99385703 99385740 -20898572 + (TCTG)n Simple_repeat Simple_repeat 1 37 0 7 1343 1051 68 8 0 chr13 99385740 99385872 -20898440 - B1_Mus1 SINE Alu -13 135 3 7 1343 464 271 87 35 chr13 99385988 99386029 -20898283 - Charlie1a DNA MER1_type -203 1252 1214 7 1343 207 0 0 0 chr13 99386029 99386052 -20898260 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 7 1343 464 271 87 35 chr13 99386052 99386239 -20898073 - Charlie1a DNA MER1_type -242 1213 1012 7 1343 732 128 33 13 chr13 99386239 99386390 -20897922 - Lx5 LINE L1 0 7050 6897 7 1343 594 212 0 8 chr13 99386390 99386509 -20897803 + Lx5 LINE L1 6751 6868 -182 7 1343 465 222 129 14 chr13 99386535 99386653 -20897659 + B1_Mus1 SINE Alu 1 118 -30 7 1343 253 368 41 41 chr13 99386544 99386666 -20897646 + ID_B1 SINE B4 90 211 -13 7 1343 1247 48 0 0 chr13 99386721 99386868 -20897444 + B1_Mus1 SINE Alu 2 148 0 7 1343 327 215 250 9 chr13 99386887 99386926 -20897386 - Charlie1a DNA MER1_type -554 901 851 7 1343 216 0 0 0 chr13 99386926 99386950 -20897362 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 1343 327 215 250 9 chr13 99386950 99387018 -20897294 - Charlie1a DNA MER1_type -605 850 768 7 1343 298 348 9 16 chr13 99387171 99387378 -20896934 + CT-rich Low_complexity Low_complexity 1 205 0 7 1343 2601 227 74 49 chr13 99387500 99388296 -20896016 + RodERV21-int LTR ERV1 7 822 -4169 7 1343 558 0 0 0 chr13 99388665 99388727 -20895585 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 1343 209 109 0 61 chr13 99388930 99388979 -20895333 + A-rich Low_complexity Low_complexity 5 50 0 7 1343 242 194 16 0 chr13 99389145 99389207 -20895105 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 7 1343 307 228 50 35 chr13 99389364 99389505 -20894807 + MYSERV-int LTR ERVK 5339 5481 -1069 7 1343 314 273 81 0 chr13 99389715 99389814 -20894498 + RLTR42-int LTR ERVK 1108 1214 -4308 7 1343 291 228 114 0 chr13 99389929 99390008 -20894304 + RLTR42-int LTR ERVK 1693 1780 -3742 7 1343 311 182 30 15 chr13 99390007 99390074 -20894238 + RLTR19-int LTR ERVK 987 1054 -5083 7 1343 334 147 39 26 chr13 99390193 99390270 -20894042 + RLTR19-int LTR ERVK 1347 1424 -1814 7 1343 2723 151 99 14 chr13 99390277 99390773 -20893539 + RLTR19-int LTR ERVK 2656 3193 -2944 7 1343 482 0 0 17 chr13 99391006 99391065 -20893247 + (GAAAA)n Simple_repeat Simple_repeat 2 59 0 7 1343 546 253 73 52 chr13 99391116 99391308 -20893004 + RLTR19-int LTR ERVK 3529 3724 -2413 7 1343 646 147 10 0 chr13 99391308 99391410 -20892902 - LSU-rRNA_Hsa rRNA rRNA -731 4304 4202 7 1343 1975 128 26 19 chr13 99391427 99391738 -20892574 + ORR1A3 LTR MaLR 6 318 -8 7 1343 776 212 74 75 chr13 99391754 99392053 -20892259 + RLTR19-int LTR ERVK 2607 2802 -436 7 1343 396 0 0 0 chr13 99392062 99392106 -20892206 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1343 1001 241 67 11 chr13 99392116 99392384 -20891928 + RLTR19-int LTR ERVK 2935 3217 -21 7 1343 1212 48 0 7 chr13 99392390 99392538 -20891774 - B1_Mm SINE Alu 0 147 1 7 1343 366 23 0 0 chr13 99392669 99392712 -20891600 + (TC)n Simple_repeat Simple_repeat 2 44 0 7 1343 300 53 0 0 chr13 99392712 99392749 -20891563 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1343 393 286 162 22 chr13 99392955 99393177 -20891135 - Charlie1a DNA MER1_type -684 771 519 7 1343 291 354 0 0 chr13 99393203 99393316 -20890996 - PB1D10 SINE Alu 0 117 5 7 1343 494 163 42 42 chr13 99394050 99394146 -20890166 + RLTR25A LTR ERVK 1 96 -1007 7 1343 1502 251 132 50 chr13 99394445 99395099 -20889213 + RMER13A LTR ERVK 21 727 -133 7 1343 25 0 0 0 chr13 99395254 99395279 -20889033 + AT_rich Low_complexity Low_complexity 1 25 0 7 1343 494 55 11 32 chr13 99395310 99395404 -20888908 + (TTTG)n Simple_repeat Simple_repeat 2 93 0 7 1343 721 236 26 45 chr13 99395422 99395577 -20888735 + MTD LTR MaLR 51 202 -217 7 1343 621 211 23 15 chr13 99395585 99395715 -20888597 + B3A SINE B2 2 132 -66 7 1343 348 24 0 0 chr13 99395718 99395759 -20888553 + (TC)n Simple_repeat Simple_repeat 1 41 0 7 1343 234 0 0 0 chr13 99395759 99395784 -20888528 + (CA)n Simple_repeat Simple_repeat 1 26 0 7 1343 817 180 132 0 chr13 99395804 99395993 -20888319 + MTD LTR MaLR 194 407 -12 7 1343 436 329 6 31 chr13 99396005 99396168 -20888144 - RSINE1 SINE B4 -4 161 3 7 1343 234 136 0 0 chr13 99396363 99396407 -20887905 + (TTTA)n Simple_repeat Simple_repeat 3 46 0 7 1343 272 296 23 0 chr13 99396434 99396522 -20887790 - 4.5SRNA scRNA scRNA 0 94 5 7 1343 1157 93 37 37 chr13 99397307 99397497 -20886815 + B2_Mm2 SINE B2 2 191 -4 7 1343 431 289 9 9 chr13 99398129 99398244 -20886068 + PB1D10 SINE Alu 3 117 0 7 1343 1099 265 20 67 chr13 99398279 99398578 -20885734 + B4 SINE B4 8 292 0 7 1343 402 277 10 10 chr13 99398612 99398714 -20885598 + PB1 SINE Alu 23 124 -3 7 1343 352 208 68 102 chr13 99399572 99399690 -20884622 - PB1D7 SINE Alu -2 118 5 7 1343 2571 137 60 86 chr13 99399995 99400531 -20883781 + RLTR28 LTR ERVL 1 522 -2 7 1343 3961 215 75 58 chr13 99400589 99401886 -20882426 - RMER1A Other Other -10 1020 2 7 1343 476 167 53 6 chr13 99402923 99403092 -20881220 + (CA)n Simple_repeat Simple_repeat 2 178 0 7 1343 510 151 40 28 chr13 99403130 99403307 -20881005 + (CATA)n Simple_repeat Simple_repeat 1 179 0 7 1343 240 232 58 0 chr13 99403310 99403379 -20880933 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 1343 502 298 21 0 chr13 99404356 99404497 -20879815 - ID_B1 SINE B4 -80 144 1 7 1343 241 196 31 125 chr13 99404817 99404881 -20879431 + B1F SINE Alu 55 112 -37 7 1343 198 0 0 0 chr13 99406038 99406060 -20878252 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 7 1343 218 304 25 12 chr13 99406060 99406140 -20878172 - ID SINE ID -140 84 4 7 1343 198 103 0 0 chr13 99407514 99407543 -20876769 + (ATG)n Simple_repeat Simple_repeat 3 31 0 7 1343 414 297 117 59 chr13 99407790 99408080 -20876232 - MLT1A LTR MaLR -2 372 66 7 1343 259 247 11 80 chr13 99408714 99408802 -20875510 - ID4 SINE ID 0 83 2 7 1343 503 276 106 0 chr13 99408889 99409012 -20875300 + MTE2b LTR MaLR 1 136 -243 7 1343 568 147 26 0 chr13 99409032 99409148 -20875164 + GA-rich Low_complexity Low_complexity 3 121 0 7 1343 950 277 5 10 chr13 99409148 99409356 -20874956 + B3 SINE B2 7 213 -3 7 1343 795 225 17 17 chr13 99409375 99409547 -20874765 + MTE2b LTR MaLR 170 341 -38 7 1343 590 266 61 159 chr13 99410038 99410383 -20873929 - MTEa LTR MaLR -5 374 64 7 1343 1898 238 111 29 chr13 99410395 99410801 -20873511 - RCHARR1 DNA MER1_type -95 879 432 7 1343 1534 129 93 26 chr13 99410801 99411103 -20873209 - RLTRETN_Mm LTR ERVK 0 322 1 7 1343 1898 238 111 29 chr13 99411103 99411245 -20873067 - RCHARR1 DNA MER1_type -543 431 286 7 1343 426 297 82 44 chr13 99411272 99411396 -20872916 - RCHARR1 DNA MER1_type -762 212 84 7 1343 3109 55 10 0 chr13 99411396 99411780 -20872532 - RLTR10 LTR ERVK -2 388 1 7 1343 426 297 82 44 chr13 99411780 99411838 -20872474 - RCHARR1 DNA MER1_type -891 83 23 7 1343 368 327 54 48 chr13 99411916 99412083 -20872229 + B4A SINE B4 8 175 -117 7 1343 189 196 0 0 chr13 99412304 99412350 -20871962 + CT-rich Low_complexity Low_complexity 1 46 0 7 1343 333 0 0 0 chr13 99412357 99412394 -20871918 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1343 410 320 79 98 chr13 99412395 99412700 -20871612 + ORR1E LTR MaLR 53 351 -8 7 1343 3089 45 3 5 chr13 99412847 99413229 -20871083 + MTA_Mm LTR MaLR 16 396 0 7 1343 210 143 0 0 chr13 99413591 99413626 -20870686 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 7 1343 798 191 7 13 chr13 99414208 99414362 -20869950 + ID_B1 SINE B4 72 224 0 7 1343 426 306 29 22 chr13 99414921 99415058 -20869254 - B1F SINE Alu -2 147 10 7 1343 464 160 0 8 chr13 99415077 99415197 -20869115 + CT-rich Low_complexity Low_complexity 2 120 0 7 1343 361 227 0 0 chr13 99415273 99415339 -20868973 + PB1D10 SINE Alu 44 109 -8 7 1343 867 240 50 5 chr13 99415688 99415889 -20868423 - B3 SINE B2 -5 211 2 7 1343 722 167 40 0 chr13 99415996 99416122 -20868190 + RLTR42 LTR ERVK 1 131 -108 7 1343 1313 172 191 7 chr13 99416175 99416479 -20867833 - RLTR42-int LTR ERVK 0 5522 5163 7 1343 543 150 346 0 chr13 99416470 99416597 -20867715 - RLTR42-int LTR ERVK -1143 4379 4209 7 1343 401 149 68 5 chr13 99416597 99416681 -20867631 + PB1D9 SINE Alu 9 94 -55 7 1343 244 262 64 64 chr13 99416609 99416719 -20867593 + ID_B1 SINE B4 99 208 -16 7 1343 1595 149 410 10 chr13 99416719 99417194 -20867118 - RLTR42-int LTR ERVK -1463 4059 3395 7 1343 875 207 51 6 chr13 99417194 99417369 -20866943 + RLTR42 LTR ERVK 57 239 0 7 1343 242 56 28 0 chr13 99417442 99417478 -20866834 + (TA)n Simple_repeat Simple_repeat 1 37 0 7 1343 215 143 86 0 chr13 99417497 99417567 -20866745 + (TTATA)n Simple_repeat Simple_repeat 3 78 0 7 1343 746 326 113 49 chr13 99417568 99418025 -20866287 - MLT2B3 LTR ERVL -89 465 2 8 1343 351 279 24 24 chr13 99418290 99418415 -20865897 - MLT1G1 LTR MaLR -434 145 21 8 1343 467 213 1 82 chr13 99419013 99419126 -20865186 + B1_Mur4 SINE Alu 23 127 -22 8 1343 274 272 105 32 chr13 99419101 99419196 -20865116 + B1_Mur1 SINE Alu 48 149 0 8 1343 1696 230 87 31 chr13 99419352 99419563 -20864749 - Lx7 LINE L1 -8 7688 7450 8 1343 1077 106 0 0 chr13 99419563 99419743 -20864569 + (CA)n Simple_repeat Simple_repeat 1 180 0 8 1343 1696 230 87 31 chr13 99419743 99420047 -20864265 - Lx7 LINE L1 -247 7449 7144 8 1343 1091 217 25 12 chr13 99420094 99420337 -20863975 - Lx7 LINE L1 -508 7188 6943 8 1343 294 282 53 0 chr13 99421773 99421887 -20862425 - MLT1E2 LTR MaLR -196 484 365 8 1343 306 0 0 0 chr13 99421995 99422029 -20862283 + (TC)n Simple_repeat Simple_repeat 1 34 0 8 1343 204 175 0 0 chr13 99422029 99422092 -20862220 + (CA)n Simple_repeat Simple_repeat 2 64 0 8 1343 213 94 0 0 chr13 99422150 99422182 -20862130 + (CA)n Simple_repeat Simple_repeat 1 32 0 8 1343 402 203 49 76 chr13 99422758 99422902 -20861410 + MLT1A1 LTR MaLR 268 407 -1 8 1343 260 282 51 13 chr13 99422916 99422995 -20861317 + MER5A DNA MER1_type 19 100 -89 8 1343 285 341 67 37 chr13 99423159 99423293 -20861019 + MIR SINE MIR 10 147 -115 8 1343 374 85 0 17 chr13 99425012 99425072 -20859240 + (TG)n Simple_repeat Simple_repeat 2 60 0 8 1343 241 356 11 0 chr13 99425577 99425667 -20858645 + RMER15 LTR ERVL 377 467 -108 8 1343 185 261 11 0 chr13 99425667 99425755 -20858557 + (CA)n Simple_repeat Simple_repeat 2 90 0 8 1343 236 278 62 44 chr13 99426409 99426522 -20857790 + MLT1G LTR MaLR 192 306 -285 8 1343 226 362 15 45 chr13 99426516 99426649 -20857663 - MamRep605 Unknown Unknown -689 187 59 8 1343 447 312 81 57 chr13 99426836 99427169 -20857143 - ORR1E LTR MaLR 0 359 19 8 1343 275 165 35 12 chr13 99427301 99427387 -20856925 + GA-rich Low_complexity Low_complexity 3 90 0 8 1343 569 257 100 58 chr13 99427707 99427744 -20856568 + B3A SINE B2 1 30 -168 8 1343 1505 179 129 9 chr13 99427744 99428077 -20856235 + ORR1D1 LTR MaLR 2 374 0 8 1343 569 257 100 58 chr13 99428077 99428229 -20856083 + B3A SINE B2 31 198 0 8 1343 468 196 33 0 chr13 99428606 99428698 -20855614 - ID_B1 SINE B4 -17 207 113 8 1343 501 259 155 38 chr13 99428747 99429012 -20855300 - L1ME2 LINE L1 -264 5900 5605 8 1343 237 254 72 29 chr13 99429109 99429178 -20855134 + B4A SINE B4 82 153 -139 8 1343 335 284 10 31 chr13 99429117 99429215 -20855097 + PB1D9 SINE Alu 10 105 -15 8 1343 855 192 26 7 chr13 99429287 99429439 -20854873 + B3A SINE B2 2 156 -42 8 1343 249 119 0 0 chr13 99429441 99429483 -20854829 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1343 256 324 126 10 chr13 99429957 99430060 -20854252 - MLT1A0 LTR MaLR -230 135 21 8 1343 515 289 8 156 chr13 99430064 99430389 -20853923 - ORR1E LTR MaLR -2 357 86 8 1343 423 205 35 93 chr13 99430389 99430561 -20853751 - RLTR43A LTR ERVK -2 362 201 8 1343 2650 164 51 53 chr13 99431477 99432006 -20852306 + RLTR11A LTR ERVK 1 528 0 8 1343 1340 198 92 26 chr13 99432144 99432491 -20851821 - ORR1D2 LTR MaLR 0 370 1 8 1343 3775 225 108 30 chr13 99432774 99433518 -20850794 + RMER12 LTR ERVK 8 789 -533 8 1343 396 0 0 0 chr13 99433518 99433562 -20850750 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 8 1343 3775 212 146 62 chr13 99433562 99434071 -20850241 + RMER12 LTR ERVK 790 1172 -150 8 1343 1856 143 54 172 chr13 99434081 99434451 -20849861 + ORR1B1 LTR MaLR 1 337 -57 8 1343 910 186 149 0 chr13 99434451 99434639 -20849673 + B3 SINE B2 1 216 0 8 1343 1856 143 54 172 chr13 99434639 99434715 -20849597 + ORR1B1 LTR MaLR 338 394 0 8 1343 1160 146 32 5 chr13 99434784 99434970 -20849342 - RLTR20D LTR ERVK -362 206 16 8 1343 2095 233 45 0 chr13 99435045 99435487 -20848825 + MT2A LTR ERVL 1 462 -71 8 1343 909 271 71 53 chr13 99435982 99436321 -20847991 - RLTR14 LTR ERV1 -5 377 33 8 1343 21 0 0 0 chr13 99436560 99436581 -20847731 + GC_rich Low_complexity Low_complexity 1 21 0 8 1343 435 327 70 48 chr13 99436636 99436864 -20847448 + MLT1F1 LTR MaLR 1 233 -336 8 1343 470 311 254 28 chr13 99436932 99437223 -20847089 - MLT1A0 LTR MaLR -6 359 3 8 1343 446 294 99 52 chr13 99437224 99437436 -20846876 + MLT1F1 LTR MaLR 346 567 -2 8 1343 558 227 0 0 chr13 99438105 99438393 -20845919 + GA-rich Low_complexity Low_complexity 1 288 0 8 1343 732 138 9 0 chr13 99438430 99438539 -20845773 + B1_Mur3 SINE Alu 40 149 0 8 1343 234 367 157 16 chr13 99438605 99438796 -20845516 + L1MC LINE L1 5337 5554 -2328 8 1343 1078 157 22 6 chr13 99438802 99438982 -20845330 + B3 SINE B2 2 184 -32 8 1343 393 81 0 0 chr13 99438982 99439044 -20845268 + (CA)n Simple_repeat Simple_repeat 1 62 0 8 1343 750 203 15 108 chr13 99439044 99439067 -20845245 + B2_Mm2 SINE B2 166 186 -9 8 1343 2975 168 44 42 chr13 99439115 99439681 -20844631 + Lx5 LINE L1 6477 7043 -7 8 1343 470 109 0 0 chr13 99439835 99439899 -20844413 - Lx5 LINE L1 -510 6540 6477 8 1343 437 0 19 0 chr13 99439974 99440027 -20844285 + (TG)n Simple_repeat Simple_repeat 1 54 0 8 1343 479 201 124 137 chr13 99440437 99440598 -20843714 + RSINE1 SINE B4 5 163 -2 8 1343 8409 38 1 0 chr13 99440836 99441813 -20842499 + RLTR13A3 LTR ERVK 1 978 0 8 1343 1360 128 10 0 chr13 99441846 99442049 -20842263 - ORR1A4 LTR MaLR -8 321 117 8 1343 2375 178 17 101 chr13 99442052 99442661 -20841651 + RLTR20A LTR ERVK 5 577 0 8 1343 731 138 57 14 chr13 99442665 99442805 -20841507 - ORR1B1 LTR MaLR -208 186 41 8 1343 894 223 104 40 chr13 99442859 99443039 -20841273 + B3 SINE B2 2 194 -22 8 1343 2469 84 12 0 chr13 99443039 99443362 -20840950 - ORR1A2 LTR MaLR 0 327 1 8 1343 894 223 104 40 chr13 99443362 99443382 -20840930 + B3 SINE B2 195 215 -1 8 1343 713 340 65 24 chr13 99443832 99444203 -20840109 + MLT1B LTR MaLR 5 390 0 8 1343 7050 92 32 43 chr13 99444604 99445461 -20838851 - Lx LINE L1 0 6654 5797 8 1343 1144 71 0 0 chr13 99445461 99445601 -20838711 + B1_Mus1 SINE Alu 2 141 -7 8 1343 615 27 0 0 chr13 99445604 99445677 -20838635 + (GAAA)n Simple_repeat Simple_repeat 3 75 0 8 1343 7050 92 32 43 chr13 99445677 99445894 -20838418 - Lx LINE L1 -858 5796 5587 8 1343 9025 136 30 6 chr13 99445908 99447390 -20836922 + L1_Mur2 LINE L1 3795 5311 -566 8 1343 2009 199 67 54 chr13 99447439 99447993 -20836319 + RLTR31_Mm LTR ERVK 1 561 0 8 1343 468 0 0 0 chr13 99449503 99449555 -20834757 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 1343 270 0 0 0 chr13 99449555 99449584 -20834728 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 1343 1456 173 87 20 chr13 99450234 99450676 -20833636 - RMER17C LTR ERVK -519 439 16 8 1343 353 230 155 56 chr13 99451411 99451572 -20832740 - MLT1A0 LTR MaLR 0 365 189 8 1343 228 35 0 0 chr13 99451715 99451744 -20832568 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 8 1343 491 305 23 8 chr13 99451767 99451899 -20832413 - RSINE1 SINE B4 -29 136 3 8 1343 836 244 132 12 chr13 99452048 99452305 -20832007 - MTE-int LTR MaLR -390 1190 903 8 1343 516 327 81 60 chr13 99452274 99452557 -20831755 - MTE2a LTR MaLR -90 289 1 8 1343 925 240 239 33 chr13 99452670 99453033 -20831279 + RLTR20A1 LTR ERVK 1 448 -103 8 1343 324 0 0 0 chr13 99453033 99453069 -20831243 + (TG)n Simple_repeat Simple_repeat 2 37 0 8 1343 925 240 239 33 chr13 99453069 99453162 -20831150 + RLTR20A1 LTR ERVK 449 550 -1 8 1343 307 241 76 0 chr13 99453190 99453269 -20831043 + L1MB5 LINE L1 5474 5558 -616 8 1343 1162 249 87 32 chr13 99453272 99453642 -20830670 + L1MB5 LINE L1 5752 6141 -33 8 1343 247 273 52 0 chr13 99453643 99453720 -20830592 + ID4 SINE ID 3 83 0 8 1343 447 162 0 0 chr13 99453721 99453801 -20830511 + (CACCAT)n Simple_repeat Simple_repeat 4 83 0 8 1343 871 195 118 42 chr13 99453819 99454108 -20830204 - RMER10A LTR ERVL 0 442 132 8 1343 957 117 56 0 chr13 99454128 99454290 -20830022 - RMER10A LTR ERVL -253 189 19 8 1343 361 186 162 12 chr13 99454986 99455072 -20829240 + PB1D10 SINE Alu 24 127 0 8 1343 303 115 0 71 chr13 99455200 99455256 -20829056 + HAL1-3A_ME LINE L1 1967 2018 -840 8 1343 757 198 12 6 chr13 99455281 99455624 -20828688 + (CATA)n Simple_repeat Simple_repeat 1 344 0 8 1343 624 199 11 22 chr13 99455594 99455774 -20828538 + (CATATA)n Simple_repeat Simple_repeat 1 178 0 8 1343 753 217 0 0 chr13 99455761 99455936 -20828376 + (CA)n Simple_repeat Simple_repeat 2 176 0 8 1343 229 146 40 40 chr13 99455961 99456011 -20828301 + MIRm SINE MIR 91 140 -136 8 1343 24 32 0 0 chr13 99456203 99456234 -20828078 + AT_rich Low_complexity Low_complexity 1 31 0 8 1343 655 154 0 26 chr13 99456620 99456733 -20827579 - PB1D9 SINE Alu -10 110 1 8 1343 671 225 53 0 chr13 99456804 99456955 -20827357 - RSINE1 SINE B4 -5 160 2 8 1343 215 394 38 13 chr13 99457208 99457365 -20826947 + MIRb SINE MIR 52 212 -56 8 1343 291 128 0 0 chr13 99457814 99457853 -20826459 + B1_Mus2 SINE Alu 97 135 -12 8 1343 337 273 74 0 chr13 99458585 99458713 -20825599 + L1MB4 LINE L1 5984 6126 -57 8 1343 700 162 103 0 chr13 99458731 99458848 -20825464 - B1_Mus2 SINE Alu 0 147 19 8 1343 962 305 33 15 chr13 99458899 99459172 -20825140 + B4A SINE B4 9 286 -6 8 1343 227 341 116 101 chr13 99459253 99459346 -20824966 - B4 SINE B4 -69 223 141 8 1343 222 37 0 0 chr13 99459346 99459373 -20824939 + (CCCCCA)n Simple_repeat Simple_repeat 5 31 0 8 1343 689 150 97 9 chr13 99459373 99459393 -20824919 - B1_Mur1 SINE Alu -94 55 25 8 1343 227 341 116 101 chr13 99459393 99459468 -20824844 - B4 SINE B4 -152 140 32 8 1343 805 216 30 50 chr13 99460391 99460591 -20823721 + B3A SINE B2 3 198 0 8 1343 880 163 0 26 chr13 99460600 99460751 -20823561 + B1_Mur1 SINE Alu 1 147 -2 8 1343 243 0 0 0 chr13 99461795 99461822 -20822490 + (TGG)n Simple_repeat Simple_repeat 3 29 0 8 1343 21 0 0 0 chr13 99462930 99462951 -20821361 + AT_rich Low_complexity Low_complexity 1 21 0 9 1343 732 150 72 36 chr13 99463617 99463755 -20820557 + B1_Mus2 SINE Alu 5 147 0 9 1343 264 59 0 0 chr13 99464124 99464158 -20820154 + (GAA)n Simple_repeat Simple_repeat 2 35 0 9 1343 539 254 80 0 chr13 99467085 99467223 -20817089 + B1F SINE Alu 1 149 0 9 1343 508 262 88 84 chr13 99467488 99467738 -20816574 - MLT1F1 LTR MaLR -9 560 310 9 1343 692 219 133 46 chr13 99467990 99468186 -20816126 + B3 SINE B2 2 214 -2 9 1343 897 245 57 0 chr13 99468203 99468395 -20815917 + B3 SINE B2 1 203 -13 9 1343 701 182 70 35 chr13 99468433 99468575 -20815737 + B1_Mur3 SINE Alu 1 147 -2 9 1343 235 294 73 40 chr13 99468597 99468721 -20815591 - L2a LINE L2 -358 3068 2941 9 1343 245 286 63 42 chr13 99468920 99469015 -20815297 - PB1 SINE Alu -4 123 27 9 1343 253 321 41 88 chr13 99468978 99469055 -20815257 - ID_B1 SINE B4 -81 143 4 9 1343 262 257 57 0 chr13 99469055 99469125 -20815187 - ID4 SINE ID -6 77 4 9 1343 285 273 130 0 chr13 99469125 99469194 -20815118 - B3A SINE B2 -58 140 62 9 1343 350 222 81 49 chr13 99469770 99469893 -20814419 + MIRb SINE MIR 41 167 -101 9 1343 869 283 92 58 chr13 99472790 99473116 -20811196 - MER58B DNA MER1_type -4 337 1 9 1343 594 219 126 0 chr13 99473167 99473286 -20811026 + B3A SINE B2 1 134 -64 9 1343 222 37 0 0 chr13 99473307 99473334 -20810978 + (CA)n Simple_repeat Simple_repeat 1 27 0 9 1343 422 316 179 51 chr13 99473428 99473921 -20810391 + L1M4c LINE L1 136 691 -5693 9 1343 262 284 12 12 chr13 99473951 99474033 -20810279 + ID4 SINE ID 2 83 0 9 1343 456 19 0 0 chr13 99474034 99474087 -20810225 + (GGGGA)n Simple_repeat Simple_repeat 4 56 0 9 1343 1307 72 0 6 chr13 99474089 99474270 -20810042 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 9 1343 696 266 233 36 chr13 99474272 99474473 -20809839 + L1M4c LINE L1 704 914 -5470 9 1343 745 204 130 20 chr13 99474473 99474673 -20809639 + URR1B DNA MER1_type 3 224 -1 9 1343 696 266 233 36 chr13 99474673 99475088 -20809224 + L1M4c LINE L1 915 1442 -4942 9 1343 231 36 0 0 chr13 99475101 99475129 -20809183 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 9 1343 1322 80 23 0 chr13 99475180 99475356 -20808956 - B2_Mm2 SINE B2 -15 180 1 9 1343 2812 247 71 37 chr13 99475370 99476250 -20808062 - RMER1C Other Other -2 1340 443 9 1343 32 26 0 0 chr13 99476367 99476406 -20807906 + AT_rich Low_complexity Low_complexity 1 39 0 9 1343 613 304 93 0 chr13 99476418 99476632 -20807680 - B4A SINE B4 -44 248 15 9 1343 249 83 0 0 chr13 99476839 99476875 -20807437 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 9 1343 411 219 0 238 chr13 99476875 99477043 -20807269 - B1_Mur1 SINE Alu -13 136 9 9 1343 1453 88 0 0 chr13 99477132 99477326 -20806986 - B2_Mm2 SINE B2 0 195 2 9 1343 957 249 5 14 chr13 99477377 99477585 -20806727 + B3 SINE B2 1 206 -10 9 1343 2830 224 40 53 chr13 99477591 99478139 -20806173 + Lx7 LINE L1 5710 6257 -1439 9 1343 2344 115 120 24 chr13 99478139 99478522 -20805790 - MTC LTR MaLR 0 421 2 9 1343 2830 224 40 53 chr13 99478522 99478722 -20805590 + Lx7 LINE L1 6258 6448 -1248 9 1343 394 236 0 22 chr13 99478722 99478813 -20805499 + MT2B LTR ERVL 1 89 -512 9 1343 280 146 12 35 chr13 99478912 99478997 -20805315 + (TTTG)n Simple_repeat Simple_repeat 2 84 0 9 1343 22 0 0 0 chr13 99479185 99479207 -20805105 + AT_rich Low_complexity Low_complexity 1 22 0 9 1343 291 237 7 36 chr13 99479337 99479477 -20804835 + (TG)n Simple_repeat Simple_repeat 1 136 0 9 1343 505 271 58 29 chr13 99479482 99479619 -20804693 - B3A SINE B2 -13 203 63 9 1343 458 158 24 32 chr13 99479628 99479752 -20804560 - Lx9 LINE L1 -6 7638 7516 9 1343 344 242 83 52 chr13 99479772 99479868 -20804444 - PB1D9 SINE Alu 0 120 38 9 1343 283 303 0 0 chr13 99479940 99480006 -20804306 - B3A SINE B2 -132 66 1 9 1343 391 189 300 6 chr13 99480897 99481057 -20803255 + L1M4c LINE L1 1419 1625 -4759 9 1343 789 164 14 14 chr13 99481063 99481205 -20803107 + B1F2 SINE Alu 7 148 -1 9 1343 316 291 65 19 chr13 99481205 99481359 -20802953 + L1M4c LINE L1 1614 1774 -4610 9 1343 254 329 26 0 chr13 99481512 99481588 -20802724 + PB1D9 SINE Alu 38 115 -5 9 1343 695 338 59 4 chr13 99481612 99481724 -20802588 + B4A SINE B4 2 114 -178 9 1343 327 25 0 0 chr13 99481724 99481764 -20802548 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 9 1343 695 338 59 4 chr13 99481764 99481889 -20802423 + B4A SINE B4 115 251 -41 9 1343 278 246 0 0 chr13 99481892 99481949 -20802363 + B3A SINE B2 3 59 -139 9 1343 1229 244 141 57 chr13 99482108 99482533 -20801779 + RMER13A LTR ERVK 1 461 -399 9 1343 407 151 0 11 chr13 99482836 99482930 -20801382 + (CA)n Simple_repeat Simple_repeat 2 94 0 9 1343 851 88 24 0 chr13 99483100 99483225 -20801087 + B1_Mur3 SINE Alu 9 136 -13 9 1343 194 62 0 30 chr13 99483225 99483258 -20801054 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 9 1343 250 225 0 49 chr13 99483305 99483376 -20800936 + L1MB3 LINE L1 5495 5562 -606 9 1343 451 241 0 9 chr13 99483518 99483627 -20800685 + L1MB3 LINE L1 5785 5892 -291 9 167 214 107 0 0 chr13 99483627 99483655 -20800657 - B1_Mus1 SINE Alu -107 41 14 9 167 261 241 24 48 chr13 99483636 99483719 -20800593 + ID_B1 SINE B4 138 218 -6 9 1344 485 81 0 75 chr13 99483651 99483722 -20800590 + B1_Mus2 SINE Alu 74 141 -6 9 1344 198 0 0 0 chr13 99483722 99483744 -20800568 + (GAA)n Simple_repeat Simple_repeat 1 22 0 9 1344 281 320 126 21 chr13 99483756 99483995 -20800317 + L1MB3 LINE L1 5911 6174 -9 9 1344 1224 35 0 0 chr13 99484187 99484328 -20799984 + B1_Mm SINE Alu 1 141 -6 9 1344 455 48 16 0 chr13 99484536 99484598 -20799714 + (TG)n Simple_repeat Simple_repeat 1 63 0 9 1344 180 0 0 0 chr13 99484600 99484620 -20799692 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 9 1344 499 313 167 58 chr13 99484681 99485095 -20799217 + Charlie2b DNA MER1_type 1877 2335 -447 9 1344 44 70 0 0 chr13 99485172 99485258 -20799054 + AT_rich Low_complexity Low_complexity 1 86 0 9 1344 22 0 0 0 chr13 99485381 99485403 -20798909 + AT_rich Low_complexity Low_complexity 1 22 0 9 1344 393 324 63 29 chr13 99485480 99485655 -20798657 - LTR82A LTR ERVL -63 809 629 9 1344 225 0 0 0 chr13 99485740 99485765 -20798547 + (CCA)n Simple_repeat Simple_repeat 2 26 0 9 1344 318 118 20 0 chr13 99485765 99485816 -20798496 + HAL1-3A_ME LINE L1 1976 2027 -831 9 1344 725 149 21 3 chr13 99485840 99486187 -20798125 + (CA)n Simple_repeat Simple_repeat 1 353 0 9 1344 296 188 116 12 chr13 99486213 99486299 -20798013 - PB1 SINE Alu 0 127 33 9 1344 441 0 0 0 chr13 99486843 99486892 -20797420 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 1344 500 252 19 62 chr13 99486957 99487118 -20797194 - MTD LTR MaLR -265 154 1 9 1344 309 109 0 0 chr13 99487167 99487213 -20797099 + (GA)n Simple_repeat Simple_repeat 1 46 0 9 1344 345 240 286 17 chr13 99487236 99487414 -20796898 + B4A SINE B4 13 238 -54 9 1344 251 222 47 59 chr13 99487575 99487720 -20796592 - RLTR20A2 LTR ERVK -300 234 80 9 1344 814 164 13 20 chr13 99488150 99488299 -20796013 + B1_Mur2 SINE Alu 1 148 -1 9 1344 470 174 120 20 chr13 99488383 99488483 -20795829 + PB1D9 SINE Alu 1 110 -10 9 1344 296 222 0 9 chr13 99488493 99488602 -20795710 + GA-rich Low_complexity Low_complexity 1 108 0 9 1344 430 118 15 0 chr13 99488905 99488973 -20795339 + B3A SINE B2 1 69 -129 9 1344 793 157 6 81 chr13 99490234 99490394 -20793918 + B1_Mus1 SINE Alu 1 148 0 9 1344 259 349 83 0 chr13 99491092 99491106 -20793206 + B4 SINE B4 81 198 -94 9 1344 384 253 53 0 chr13 99491106 99491201 -20793111 + B1F SINE Alu 10 109 -40 9 1344 396 0 0 0 chr13 99491203 99491247 -20793065 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 1344 571 191 94 8 chr13 99491661 99491788 -20792524 - B1_Mur4 SINE Alu 0 150 13 9 1344 361 282 138 61 chr13 99491663 99491844 -20792468 - B4 SINE B4 -69 223 29 9 1344 350 243 154 60 chr13 99491696 99491897 -20792415 - MT2B LTR ERVL -344 257 38 9 1344 232 360 23 23 chr13 99492160 99492248 -20792064 + B4 SINE B4 73 160 -132 9 1344 319 222 136 39 chr13 99492178 99492281 -20792031 + PB1D7 SINE Alu 8 120 0 9 1344 2167 154 22 5 chr13 99492345 99492716 -20791596 + ORR1C1 LTR MaLR 2 378 0 9 1344 2681 184 73 21 chr13 99492716 99493294 -20791018 + ORR1C1-int LTR MaLR 13 679 -901 9 1344 707 154 335 6 chr13 99496257 99496427 -20787885 - URR1A DNA MER1_type 0 226 1 9 1344 571 158 234 0 chr13 99496573 99496694 -20787618 - B2_Mm2 SINE B2 -38 160 1 9 1344 1293 180 87 10 chr13 99497121 99497477 -20786835 + RLTR20D LTR ERVK 1 464 -104 9 1344 435 19 0 0 chr13 99497477 99497529 -20786783 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 1344 875 173 147 5 chr13 99497529 99497613 -20786699 + RLTR20D LTR ERVK 465 566 -2 9 1344 1362 143 5 0 chr13 99498134 99498343 -20785969 + URR1A DNA MER1_type 7 216 -10 9 1344 198 0 0 0 chr13 99498588 99498610 -20785702 + (CCCCCA)n Simple_repeat Simple_repeat 2 23 0 9 1344 186 150 0 0 chr13 99499895 99499935 -20784377 + (CAAAAA)n Simple_repeat Simple_repeat 4 43 0 9 1344 294 237 91 13 chr13 99500000 99500077 -20784235 + RSINE1 SINE B4 73 155 -10 1 1344 1039 102 78 17 chr13 99500318 99500497 -20783815 + ORR1A4 LTR MaLR 140 329 0 2 1344 224 275 36 48 chr13 99500568 99500652 -20783660 - B4A SINE B4 -208 84 2 3 1344 27 0 0 0 chr13 99501196 99501223 -20783089 + AT_rich Low_complexity Low_complexity 1 27 0 4 1344 24 0 0 0 chr13 99501259 99501283 -20783029 + AT_rich Low_complexity Low_complexity 1 24 0 5 1344 231 317 48 71 chr13 99503008 99503276 -20781036 + L2 LINE L2 736 997 -2422 6 1344 278 329 184 33 chr13 99503659 99504018 -20780294 + L2 LINE L2 2626 3038 -381 6 1344 320 214 43 104 chr13 99504209 99504324 -20779988 + MT2B LTR ERVL 144 251 -350 7 1344 486 214 17 26 chr13 99504233 99504348 -20779964 + PB1D9 SINE Alu 7 120 0 8 1344 220 213 21 0 chr13 99504350 99504397 -20779915 + GA-rich Low_complexity Low_complexity 3 50 0 9 1344 556 244 143 55 chr13 99504472 99504654 -20779658 + B3A SINE B2 1 198 0 1 1344 516 152 0 0 chr13 99504719 99504806 -20779506 + (TATATG)n Simple_repeat Simple_repeat 2 88 0 1 1344 471 35 0 0 chr13 99504806 99504863 -20779449 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1344 1173 67 35 29 chr13 99505413 99505583 -20778729 - B2_Mm2 SINE B2 -23 172 2 1 1344 329 300 125 96 chr13 99506132 99506445 -20777867 - ORR1E LTR MaLR -2 357 36 1 1344 1106 71 0 0 chr13 99506726 99506866 -20777446 + B1_Mus2 SINE Alu 2 141 -6 1 1344 207 0 0 0 chr13 99506867 99506890 -20777422 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 1 1344 311 261 44 44 chr13 99507292 99507428 -20776884 - L1MB3 LINE L1 -144 6039 5904 1 1344 1399 51 22 0 chr13 99507585 99507763 -20776549 + B2_Mm2 SINE B2 2 183 -12 1 1344 977 99 35 6 chr13 99507764 99507936 -20776376 + (GGAAA)n Simple_repeat Simple_repeat 4 180 0 1 1344 539 385 14 3 chr13 99507958 99508178 -20776134 + polypurine Low_complexity Low_complexity 1 222 0 2 1344 786 22 0 0 chr13 99508178 99508270 -20776042 + (GGAAA)n Simple_repeat Simple_repeat 3 94 0 2 1344 582 261 49 20 chr13 99508283 99508486 -20775826 - L1MB3 LINE L1 -500 5683 5475 1 1344 825 208 16 22 chr13 99508661 99508843 -20775469 + MER2 DNA MER2_type 111 291 -54 2 1344 906 281 62 33 chr13 99508998 99509270 -20775042 + B4A SINE B4 3 282 -10 2 1344 426 20 0 0 chr13 99509279 99509330 -20774982 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1344 217 250 0 0 chr13 99509553 99509609 -20774703 + T-rich Low_complexity Low_complexity 1 56 0 2 1344 623 176 259 23 chr13 99509924 99510098 -20774214 - B3 SINE B2 0 216 2 2 1344 21 0 0 0 chr13 99511586 99511607 -20772705 + AT_rich Low_complexity Low_complexity 1 21 0 2 1344 5457 59 28 6 chr13 99511619 99512331 -20771981 - L1_Mus1 LINE L1 0 6567 5840 2 1344 583 305 57 36 chr13 99512442 99512636 -20771676 - B3A SINE B2 0 198 1 2 1344 416 176 15 168 chr13 99513133 99513270 -20771042 + PB1D9 SINE Alu 3 118 -2 3 1344 484 270 23 16 chr13 99513922 99514050 -20770262 - B3A SINE B2 0 198 70 3 1344 826 101 151 42 chr13 99514165 99514331 -20769981 + B2_Mm2 SINE B2 2 185 -10 3 1344 268 250 0 0 chr13 99514758 99514810 -20769502 + tRNA-Ala-GCY_ tRNA tRNA 9 60 -15 3 1344 712 159 8 31 chr13 99515578 99515708 -20768604 + B1_Mur2 SINE Alu 22 148 -1 3 1344 2046 149 79 14 chr13 99516657 99517024 -20767288 + ORR1B1 LTR MaLR 1 391 -3 3 1344 436 241 74 0 chr13 99517027 99517135 -20767177 - RSINE1 SINE B4 -47 118 3 3 1344 462 303 80 22 chr13 99519543 99519769 -20764543 + L1MC1 LINE L1 6088 6326 -7 3 1344 749 173 67 15 chr13 99520088 99520223 -20764089 + B1_Mur3 SINE Alu 1 142 -7 3 1344 1391 66 11 0 chr13 99520778 99520961 -20763351 - B2_Mm1t SINE B2 -8 185 1 3 1344 1441 63 11 0 chr13 99520974 99521163 -20763149 - B2_Mm1a SINE B2 -2 191 1 4 1344 1612 37 0 0 chr13 99521176 99521366 -20762946 - B2_Mm1a SINE B2 -2 191 2 4 1344 24 32 0 0 chr13 99521901 99521932 -20762380 + AT_rich Low_complexity Low_complexity 1 31 0 4 1344 405 0 0 0 chr13 99522994 99523039 -20761273 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1344 527 196 45 0 chr13 99523059 99523164 -20761148 + B1_Mur3 SINE Alu 2 111 -38 4 1344 286 322 106 53 chr13 99523392 99523543 -20760769 - RSINE1 SINE B4 -2 163 5 4 1344 274 333 13 0 chr13 99523616 99523691 -20760621 + ID4_ SINE ID 2 77 -6 4 1344 592 217 51 0 chr13 99523933 99524066 -20760246 + B1_Mus1 SINE Alu 4 143 -5 4 1344 887 59 0 29 chr13 99524066 99524205 -20760107 + (GGGGA)n Simple_repeat Simple_repeat 2 136 0 4 1344 694 212 23 96 chr13 99524285 99524504 -20759808 + B3 SINE B2 4 206 -10 4 1344 21 36 0 0 chr13 99524694 99524722 -20759590 + AT_rich Low_complexity Low_complexity 1 28 0 5 1344 342 311 97 90 chr13 99524746 99524891 -20759421 + RSINE1 SINE B4 8 153 -12 5 1344 31 0 0 0 chr13 99524929 99524960 -20759352 + AT_rich Low_complexity Low_complexity 1 31 0 5 1344 214 260 0 0 chr13 99525306 99525356 -20758956 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 5 1344 836 183 7 0 chr13 99525674 99525816 -20758496 + B1_Mur2 SINE Alu 1 143 -6 5 1344 532 335 22 24 chr13 99525970 99526173 -20758139 + B3A SINE B2 8 213 -3 5 1344 403 273 59 20 chr13 99526258 99526411 -20757901 + Lx4B LINE L1 6883 7041 -17 5 1344 1200 70 88 0 chr13 99526564 99526735 -20757577 - B2_Mm2 SINE B2 -8 187 2 5 1344 229 272 86 73 chr13 99526791 99527025 -20757287 + L1MC5 LINE L1 7300 7536 -425 5 1344 604 271 53 0 chr13 99527230 99527418 -20756894 + L1MA5 LINE L1 5673 5870 -430 5 1344 1766 85 135 15 chr13 99527419 99527693 -20756619 - Lx LINE L1 -6 6648 6342 6 1344 288 53 0 0 chr13 99527720 99527758 -20756554 + (CAGA)n Simple_repeat Simple_repeat 1 38 0 6 1344 240 217 164 9 chr13 99527788 99527904 -20756408 + L1MA5 LINE L1 6164 6297 -3 5 1344 354 239 206 22 chr13 99527979 99528159 -20756153 + L1MD LINE L1 2172 2384 -3762 6 1344 354 280 92 14 chr13 99528173 99528396 -20755916 + L1MD1 LINE L1 5677 5929 -430 6 1344 549 211 35 9 chr13 99528424 99528539 -20755773 + B3A SINE B2 1 118 -80 6 1344 210 264 129 107 chr13 99528539 99528564 -20755748 + B4A SINE B4 1 143 -149 6 1344 542 147 190 0 chr13 99528917 99529033 -20755279 + B1_Mus2 SINE Alu 3 140 -7 6 1344 354 263 68 0 chr13 99529034 99529152 -20755160 + GA-rich Low_complexity Low_complexity 4 129 0 6 1344 203 125 25 0 chr13 99529295 99529335 -20754977 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1344 471 118 0 0 chr13 99529337 99529413 -20754899 + (CAGA)n Simple_repeat Simple_repeat 1 76 0 6 1344 719 200 27 14 chr13 99529633 99529780 -20754532 + B1_Mur3 SINE Alu 1 149 0 7 1344 201 147 0 0 chr13 99529780 99529814 -20754498 + (CAGA)n Simple_repeat Simple_repeat 2 35 0 7 1344 1795 87 37 29 chr13 99529980 99530252 -20754060 + L1Md_F2 LINE L1 6299 6572 -10 7 1344 1242 54 9 131 chr13 99531272 99531352 -20752960 - B2_Mm2 SINE B2 -7 188 122 7 1344 1033 81 0 0 chr13 99531352 99531488 -20752824 + B1_Mus2 SINE Alu 1 136 -11 7 1344 1242 54 9 131 chr13 99531488 99531621 -20752691 - B2_Mm2 SINE B2 -74 121 1 7 1344 438 254 77 71 chr13 99531659 99531841 -20752471 - B3A SINE B2 -15 183 1 7 1344 257 0 30 0 chr13 99532008 99532041 -20752271 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1344 711 199 64 0 chr13 99532312 99532453 -20751859 + B1_Mur4 SINE Alu 1 150 0 7 1344 22 35 0 0 chr13 99532752 99532781 -20751531 + AT_rich Low_complexity Low_complexity 1 29 0 7 1344 713 110 72 22 chr13 99532873 99533012 -20751300 + Lx4A LINE L1 6912 7057 -1 7 1344 371 265 25 39 chr13 99534712 99534868 -20749444 - RSINE1 SINE B4 -139 153 5 8 1344 365 308 102 8 chr13 99535013 99535131 -20749181 - RSINE1 SINE B4 -34 131 3 8 1344 24 0 0 0 chr13 99535139 99535163 -20749149 + AT_rich Low_complexity Low_complexity 1 24 0 8 1344 432 0 0 0 chr13 99535170 99535218 -20749094 + (TATG)n Simple_repeat Simple_repeat 1 48 0 8 1344 696 257 0 67 chr13 99535222 99535401 -20748911 - B3 SINE B2 -48 168 2 8 1344 21 36 0 0 chr13 99535401 99535429 -20748883 + AT_rich Low_complexity Low_complexity 1 28 0 8 1344 363 293 63 143 chr13 99535451 99535626 -20748686 + RSINE1 SINE B4 3 163 -2 8 1344 562 159 86 132 chr13 99536045 99536070 -20748242 - B1_Mur1 SINE Alu 0 149 128 8 1344 1166 68 0 0 chr13 99536070 99536217 -20748095 + B1_Mus1 SINE Alu 2 148 0 8 1344 345 47 0 0 chr13 99536220 99536263 -20748049 + (GA)n Simple_repeat Simple_repeat 1 43 0 8 1344 562 159 86 132 chr13 99536263 99536385 -20747927 - B1_Mur1 SINE Alu -22 127 5 8 1344 21 0 0 0 chr13 99536740 99536761 -20747551 + AT_rich Low_complexity Low_complexity 1 21 0 9 1344 268 281 162 15 chr13 99536858 99536968 -20747344 + PB1D10 SINE Alu 2 119 -30 9 1344 1341 82 27 0 chr13 99537024 99537208 -20747104 - B2_Mm1t SINE B2 -4 189 1 9 1344 240 182 55 0 chr13 99539232 99539287 -20745025 + B3A SINE B2 1 58 -140 9 1344 413 101 174 9 chr13 99539441 99539552 -20744760 - B2_Mm2 SINE B2 -1 194 47 9 1344 1103 81 0 0 chr13 99539567 99539715 -20744597 - B2_Mm2 SINE B2 -46 149 2 9 1344 210 150 0 0 chr13 99539719 99539759 -20744553 + (TTG)n Simple_repeat Simple_repeat 2 41 0 9 1344 483 199 62 60 chr13 99539786 99539904 -20744408 + B1_Mus1 SINE Alu 3 122 -27 9 1344 435 281 9 46 chr13 99539922 99540030 -20744282 + PB1D10 SINE Alu 7 110 -7 9 1344 612 254 31 0 chr13 99540066 99540196 -20744116 + B1_Mur2 SINE Alu 9 142 -7 9 1344 428 300 0 0 chr13 99540246 99540356 -20743956 + RSINE1 SINE B4 5 114 -51 1 1344 22 94 0 0 chr13 99540378 99540442 -20743870 + AT_rich Low_complexity Low_complexity 1 64 0 1 1344 340 218 13 13 chr13 99540749 99540828 -20743484 + ID4 SINE ID 3 81 -2 1 1344 261 0 0 0 chr13 99540997 99541026 -20743286 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1344 969 87 43 0 chr13 99541026 99541164 -20743148 - B1_Mus2 SINE Alu -3 144 1 1 1344 747 213 93 7 chr13 99541191 99541342 -20742970 + B3 SINE B2 1 164 -52 1 1344 291 250 90 28 chr13 99541402 99541546 -20742766 + L1M4 LINE L1 5279 5431 -747 1 1344 227 255 0 0 chr13 99541670 99541717 -20742595 + CT-rich Low_complexity Low_complexity 4 50 0 1 1344 291 172 0 86 chr13 99541728 99541798 -20742514 + B1_Mur3 SINE Alu 82 145 -4 1 1344 35 0 0 0 chr13 99542096 99542131 -20742181 + AT_rich Low_complexity Low_complexity 1 35 0 1 1344 742 105 38 8 chr13 99542359 99542503 -20741809 - B1_Mus1 SINE Alu -1 149 1 1 1344 25 31 0 0 chr13 99542503 99542535 -20741777 + AT_rich Low_complexity Low_complexity 1 32 0 1 1344 192 172 61 0 chr13 99542801 99542871 -20741441 + (TA)n Simple_repeat Simple_repeat 1 74 0 1 1344 3597 46 5 2 chr13 99542871 99543306 -20741006 - RLTR10C LTR ERVK 0 436 1 1 1344 192 172 61 0 chr13 99543306 99543334 -20740978 + (TA)n Simple_repeat Simple_repeat 1 30 0 1 1344 232 340 0 19 chr13 99543337 99543442 -20740870 - L1MD2 LINE L1 -45 6314 6212 1 1344 729 163 116 0 chr13 99543833 99543962 -20740350 - B1_Mus1 SINE Alu 0 148 5 1 1344 21 0 0 0 chr13 99544354 99544375 -20739937 + AT_rich Low_complexity Low_complexity 1 21 0 1 1344 396 204 137 39 chr13 99544438 99544540 -20739772 + PB1D9 SINE Alu 3 114 -6 1 1344 425 250 134 0 chr13 99544577 99544689 -20739623 + B1_Mur2 SINE Alu 1 127 -22 1 1344 1034 233 19 0 chr13 99545113 99545319 -20738993 + B3 SINE B2 1 210 -6 1 1344 326 232 117 0 chr13 99545455 99545533 -20738779 + PB1D10 SINE Alu 23 114 -6 1 1344 999 167 157 0 chr13 99545535 99545733 -20738579 + Lx2B LINE L1 6769 6997 -3 1 1344 29 47 0 0 chr13 99546611 99546654 -20737658 + AT_rich Low_complexity Low_complexity 1 43 0 1 1344 956 129 0 7 chr13 99546654 99546794 -20737518 + B1_Mus1 SINE Alu 9 147 -1 1 1344 756 92 263 19 chr13 99546800 99546956 -20737356 + B2_Mm2 SINE B2 2 195 0 1 1344 661 210 123 23 chr13 99546966 99547137 -20737175 + B2_Mm2 SINE B2 1 188 -7 1 1344 21 57 0 0 chr13 99547451 99547486 -20736826 + AT_rich Low_complexity Low_complexity 1 35 0 1 1344 578 217 35 0 chr13 99548482 99548597 -20735715 + B3A SINE B2 2 120 -78 1 1344 352 174 185 43 chr13 99548658 99548790 -20735522 + RMER17C LTR ERVK 91 246 -164 1 1344 198 0 0 0 chr13 99548790 99548812 -20735500 + (TCCCC)n Simple_repeat Simple_repeat 1 22 0 1 1344 352 174 185 43 chr13 99548812 99548841 -20735471 + RMER17C LTR ERVK 247 275 -135 1 1344 737 203 86 86 chr13 99548920 99549130 -20735182 + B3 SINE B2 1 210 -6 1 1344 26 0 0 0 chr13 99549136 99549162 -20735150 + AT_rich Low_complexity Low_complexity 1 26 0 1 1344 1161 75 0 0 chr13 99549311 99549458 -20734854 - B1_Mus2 SINE Alu 0 147 1 1 1344 180 0 0 0 chr13 99549462 99549482 -20734830 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 1344 1255 34 0 0 chr13 99549494 99549641 -20734671 - B1_Mm SINE Alu 0 147 1 1 1344 1237 136 19 28 chr13 99549708 99549920 -20734392 - B3 SINE B2 -6 210 1 1 1344 1502 179 82 4 chr13 99550071 99550351 -20733961 - Lx5 LINE L1 -1 7049 6748 1 1344 214 192 19 19 chr13 99550475 99550528 -20733784 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1344 246 290 118 0 chr13 99550569 99550662 -20733650 + B1F1 SINE Alu 1 104 -45 1 1344 407 167 15 0 chr13 99550673 99550739 -20733573 + B3A SINE B2 84 150 -48 1 1344 502 192 40 40 chr13 99551091 99551216 -20733096 + B1_Mur4 SINE Alu 7 131 -19 1 1344 330 295 64 11 chr13 99551254 99551366 -20732946 + B1F1 SINE Alu 6 117 0 1 1344 23 0 0 0 chr13 99551477 99551500 -20732812 + AT_rich Low_complexity Low_complexity 1 23 0 1 1344 762 229 14 7 chr13 99551500 99551645 -20732667 + B3 SINE B2 1 146 -70 1 1344 32 0 0 0 chr13 99551655 99551687 -20732625 + AT_rich Low_complexity Low_complexity 1 32 0 1 1344 464 297 152 50 chr13 99552148 99552431 -20731881 - MER46C DNA MER2_type -7 331 20 1 1344 213 318 58 43 chr13 99552679 99552817 -20731495 + L2a LINE L2 2691 2830 -589 1 1344 219 239 43 0 chr13 99553113 99553159 -20731153 - RSINE1 SINE B4 -19 146 99 1 1344 267 276 132 0 chr13 99554006 99554082 -20730230 + L2a LINE L2 3283 3368 -58 1 1344 565 321 49 16 chr13 99554231 99554475 -20729837 + ORR1E LTR MaLR 1 252 -107 1 1344 361 256 46 93 chr13 99554855 99555006 -20729306 - B2_Mm2 SINE B2 -9 186 43 1 1344 531 94 0 0 chr13 99555221 99555306 -20729006 - L1Md_F2 LINE L1 0 6582 6498 1 1344 755 141 86 36 chr13 99555539 99555679 -20728633 + B1_Mus2 SINE Alu 1 147 0 1 1344 439 305 84 0 chr13 99556663 99556794 -20727518 - B3A SINE B2 0 198 57 1 1344 271 280 149 65 chr13 99557032 99557139 -20727173 + RSINE1 SINE B4 2 117 -48 1 1344 881 262 37 24 chr13 99557330 99557560 -20726752 + Lx7 LINE L1 7118 7343 -353 1 1344 1482 86 5 0 chr13 99557560 99557746 -20726566 - B2_Mm1t SINE B2 -5 188 2 1 1344 881 262 37 24 chr13 99557746 99557812 -20726500 + Lx7 LINE L1 7344 7417 -279 1 1344 207 100 0 0 chr13 99558177 99558207 -20726105 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1344 1228 75 0 13 chr13 99558245 99558394 -20725918 - B1_Mus2 SINE Alu 0 147 1 1 1344 438 218 146 0 chr13 99558632 99558742 -20725570 + B1_Mus2 SINE Alu 10 135 -12 1 1344 180 0 0 0 chr13 99558742 99558762 -20725550 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 1 1344 342 152 0 0 chr13 99558767 99558826 -20725486 + A-rich Low_complexity Low_complexity 1 59 0 1 1344 619 270 136 45 chr13 99558996 99559260 -20725052 + B4A SINE B4 3 290 -2 1 1344 551 81 17 59 chr13 99559479 99559597 -20724715 + L1Md_F3 LINE L1 6470 6582 -2 1 1344 1237 62 0 0 chr13 99560047 99560192 -20724120 + B1_Mus1 SINE Alu 4 148 0 1 1344 401 282 0 0 chr13 99560361 99560439 -20723873 + ID4 SINE ID 1 78 -5 1 1344 237 119 0 0 chr13 99560838 99560880 -20723432 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1344 919 151 21 21 chr13 99560884 99561026 -20723286 + B1_Mur3 SINE Alu 1 142 -7 1 1344 2875 59 33 11 chr13 99561050 99561412 -20722900 + L1Md_F2 LINE L1 6208 6577 -5 1 1344 791 154 41 27 chr13 99561500 99561647 -20722665 + B1_Mur3 SINE Alu 1 149 0 1 1344 200 222 0 0 chr13 99561648 99561693 -20722619 + A-rich Low_complexity Low_complexity 1 45 0 1 1344 402 323 0 63 chr13 99561996 99562138 -20722174 + RSINE1 SINE B4 2 134 -31 1 1344 1155 186 19 10 chr13 99562156 99562362 -20721950 - B3 SINE B2 -3 213 6 1 1344 29 47 0 0 chr13 99562363 99562406 -20721906 + AT_rich Low_complexity Low_complexity 1 43 0 1 1344 922 220 75 0 chr13 99563008 99563181 -20721131 + B3 SINE B2 3 188 -28 1 1344 344 222 116 53 chr13 99564165 99564260 -20720052 - PB1D7 SINE Alu -11 109 9 1 1344 583 263 79 0 chr13 99564412 99564602 -20719710 + Lx9 LINE L1 7294 7498 -146 1 1344 4085 136 130 69 chr13 99564984 99565109 -20719203 - RMER19B LTR ERVK 0 902 792 1 1344 1210 55 7 0 chr13 99565109 99565254 -20719058 + B1_Mm SINE Alu 2 147 0 1 1344 4085 161 118 78 chr13 99565254 99566101 -20718211 - RMER19B LTR ERVK -111 791 1 1 1344 1311 47 0 0 chr13 99566413 99566561 -20717751 + B1_Mus1 SINE Alu 1 148 0 1 1344 335 207 36 12 chr13 99567113 99567196 -20717116 - Tigger7 DNA MER2_type -89 2402 2318 1 1344 342 270 27 0 chr13 99567226 99567300 -20717012 + PB1D10 SINE Alu 2 77 -40 1 1344 535 234 54 15 chr13 99567412 99567542 -20716770 + RSINE1 SINE B4 23 157 -8 1 1344 204 137 0 56 chr13 99567582 99567636 -20716676 + T-rich Low_complexity Low_complexity 2 52 0 1 1344 761 86 231 0 chr13 99567636 99567753 -20716559 - B1_Mus1 SINE Alu 0 148 5 1 1344 29 28 0 0 chr13 99567912 99567948 -20716364 + AT_rich Low_complexity Low_complexity 1 36 0 1 1344 614 158 64 40 chr13 99568561 99568686 -20715626 - B1_Mus2 SINE Alu 0 147 20 1 1344 790 197 7 14 chr13 99568691 99568835 -20715477 + B1_Mur3 SINE Alu 1 143 -6 1 1344 937 190 50 25 chr13 99568961 99569161 -20715151 + B3 SINE B2 2 206 -10 1 1344 1339 71 58 32 chr13 99569183 99569373 -20714939 + B2_Mm2 SINE B2 1 195 0 1 1344 579 195 146 0 chr13 99569628 99569751 -20714561 + B1_Mur3 SINE Alu 2 142 -7 1 1344 674 200 27 33 chr13 99569786 99569936 -20714376 + B1_Mur2 SINE Alu 1 149 0 1 1344 1844 252 37 31 chr13 99570010 99570497 -20713815 + Lx6 LINE L1 6945 7434 -26 1 1344 824 212 28 34 chr13 99570519 99570695 -20713617 + B3 SINE B2 33 207 -9 1 1344 6347 107 19 201 chr13 99570739 99571113 -20713199 + MTB-int LTR MaLR 1 390 -708 1 1344 1668 52 0 5 chr13 99571113 99571305 -20713007 + B2_Mm1t SINE B2 1 191 -2 1 1344 6347 107 19 201 chr13 99571305 99571316 -20712996 + MTB-int LTR MaLR 391 391 -707 1 1344 1240 68 0 13 chr13 99571316 99571465 -20712847 + B1_Mus2 SINE Alu 1 147 0 1 1344 6347 107 19 201 chr13 99571465 99571481 -20712831 + MTB-int LTR MaLR 391 391 -707 1 1344 438 20 0 0 chr13 99571481 99571532 -20712780 + (GA)n Simple_repeat Simple_repeat 2 52 0 1 1344 6347 107 19 201 chr13 99571532 99572471 -20711841 + MTB-int LTR MaLR 391 1098 0 1 1344 2664 64 108 0 chr13 99572471 99572832 -20711480 + MTB LTR MaLR 1 400 0 1 1344 359 281 124 8 chr13 99572867 99572996 -20711316 + B1F1 SINE Alu 6 149 0 1 1344 440 256 63 16 chr13 99573009 99573136 -20711176 + RSINE1 SINE B4 2 134 -31 1 1344 189 0 0 0 chr13 99573425 99573446 -20710866 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1344 1743 16 5 0 chr13 99573513 99573698 -20710614 + B2_Mm1a SINE B2 1 186 -7 2 1344 918 123 7 0 chr13 99574370 99574508 -20709804 + B1_Mur3 SINE Alu 11 149 0 2 1344 239 0 0 31 chr13 99574508 99574540 -20709772 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 2 1344 281 253 117 104 chr13 99574594 99574757 -20709555 - L2 LINE L2 -3226 193 29 2 1344 321 256 85 43 chr13 99575103 99575197 -20709115 + ID_B1 SINE B4 111 208 -16 2 1344 602 220 38 8 chr13 99575226 99575359 -20708953 + B1_Mur1 SINE Alu 12 148 -1 2 1344 21 0 0 0 chr13 99575449 99575470 -20708842 + AT_rich Low_complexity Low_complexity 1 21 0 2 1344 742 150 59 22 chr13 99575607 99575743 -20708569 + B1_Mur3 SINE Alu 2 142 -7 2 1344 31 0 0 0 chr13 99575760 99575791 -20708521 + AT_rich Low_complexity Low_complexity 1 31 0 2 1344 1302 34 7 0 chr13 99575978 99576124 -20708188 + B1_Mm SINE Alu 1 147 0 2 1344 25 51 0 0 chr13 99576124 99576163 -20708149 + AT_rich Low_complexity Low_complexity 1 39 0 2 1344 777 31 0 20 chr13 99576440 99576538 -20707774 - B1_Mm SINE Alu 0 147 52 2 1344 276 213 79 32 chr13 99576486 99576549 -20707763 - RLTR25A LTR ERVK -521 582 517 2 1344 1540 60 33 0 chr13 99576581 99576764 -20707548 + B2_Mm2 SINE B2 2 190 -5 2 1344 587 232 77 39 chr13 99577023 99577153 -20707159 + B1_Mur2 SINE Alu 1 135 -14 2 1344 225 108 0 0 chr13 99577153 99577190 -20707122 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 2 1344 992 165 216 0 chr13 99577312 99577488 -20706824 - B3 SINE B2 -2 214 1 2 1344 862 147 52 0 chr13 99578204 99578340 -20705972 + B1_Mur4 SINE Alu 1 143 -7 2 1344 389 162 50 118 chr13 99578491 99578610 -20705702 + MT2B LTR ERVL 155 265 -336 2 1344 794 120 48 0 chr13 99578519 99578644 -20705668 + B1_Mus1 SINE Alu 18 148 0 2 1344 1223 74 72 18 chr13 99579124 99579290 -20705022 - B2_Mm2 SINE B2 -19 176 2 2 1344 24 53 0 0 chr13 99581037 99581075 -20703237 + AT_rich Low_complexity Low_complexity 1 38 0 2 1344 1141 63 28 14 chr13 99581082 99581226 -20703086 + B1_Mm SINE Alu 2 147 0 2 1344 234 0 0 0 chr13 99581233 99581259 -20703053 + (TA)n Simple_repeat Simple_repeat 2 27 0 2 1344 597 210 100 64 chr13 99581525 99581774 -20702538 + L1MB7 LINE L1 4637 4894 -1252 2 1344 1293 54 0 0 chr13 99581796 99581943 -20702369 + B1_Mus1 SINE Alu 2 148 0 2 1344 315 122 0 0 chr13 99581946 99581995 -20702317 + (A)n Simple_repeat Simple_repeat 1 49 0 2 1344 876 121 14 2 chr13 99582001 99582143 -20702169 + B2_Mm2 SINE B2 1 160 -33 2 1344 423 0 0 0 chr13 99582143 99582190 -20702122 + (TAAA)n Simple_repeat Simple_repeat 3 49 0 2 1344 853 125 116 19 chr13 99582190 99582202 -20702110 + B2_Mm1t SINE B2 161 170 -23 2 1344 249 33 0 0 chr13 99582202 99582232 -20702080 + (GA)n Simple_repeat Simple_repeat 1 30 0 2 1344 648 0 0 0 chr13 99582227 99582299 -20702013 + (GAAAA)n Simple_repeat Simple_repeat 3 74 0 2 1344 247 264 172 54 chr13 99582384 99582588 -20701724 + L1MB7 LINE L1 5018 5245 -901 2 1344 547 218 36 0 chr13 99583158 99583268 -20701044 + B1_Mus1 SINE Alu 35 148 0 2 1344 274 236 0 23 chr13 99583274 99583297 -20701015 + ID_B1 SINE B4 81 126 -98 2 1344 283 163 0 0 chr13 99583297 99583346 -20700966 + B1F2 SINE Alu 13 61 -88 2 1344 274 236 0 23 chr13 99583346 99583357 -20700955 + ID_B1 SINE B4 127 153 -71 2 1344 1257 242 188 84 chr13 99583401 99584153 -20700159 + L1MB7 LINE L1 5258 6087 -97 2 1344 22 0 0 0 chr13 99584779 99584801 -20699511 + GC_rich Low_complexity Low_complexity 1 22 0 2 1344 261 0 0 0 chr13 99585066 99585095 -20699217 + (CCG)n Simple_repeat Simple_repeat 3 31 0 2 1344 1002 223 10 5 chr13 99586263 99586461 -20697851 - B3 SINE B2 -11 205 7 2 1344 983 54 0 8 chr13 99586933 99587064 -20697248 + (GGGAGA)n Simple_repeat Simple_repeat 3 132 0 2 1344 272 48 24 0 chr13 99587232 99587274 -20697038 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 2 1344 180 135 0 0 chr13 99587317 99587354 -20696958 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 2 1344 381 22 0 0 chr13 99587357 99587403 -20696909 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1344 1495 86 0 5 chr13 99587425 99587612 -20696700 + B2_Mm2 SINE B2 2 187 -8 2 1344 984 278 100 40 chr13 99587621 99588000 -20696312 + Zaphod DNA Tip100 105 506 -3525 2 1344 1048 117 0 0 chr13 99588549 99588686 -20695626 + B1_Mus1 SINE Alu 2 138 -10 2 1344 378 57 0 0 chr13 99588686 99588739 -20695573 + (CATA)n Simple_repeat Simple_repeat 2 54 0 2 1344 1296 98 17 34 chr13 99590086 99590265 -20694047 + B2_Mm2 SINE B2 1 176 -19 2 1344 315 336 81 0 chr13 99590688 99590837 -20693475 + MamGypLTR3 LTR Gypsy 344 504 -335 2 1344 1912 245 122 45 chr13 99591138 99591516 -20692796 + Lx8 LINE L1 6657 7062 -411 2 1344 2347 167 14 29 chr13 99591516 99591929 -20692383 - MTB_Mm LTR MaLR 0 407 1 2 1344 1912 245 122 45 chr13 99591929 99592173 -20692139 + Lx8 LINE L1 7063 7327 -146 2 1344 907 171 0 7 chr13 99592391 99592532 -20691780 - B1_Mus2 SINE Alu -6 141 2 2 1344 252 0 0 0 chr13 99592533 99592561 -20691751 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1344 724 304 73 4 chr13 99592759 99593033 -20691279 - Lx8 LINE L1 -244 7229 6937 2 1344 1239 62 7 0 chr13 99593268 99593414 -20690898 + B1_Mus1 SINE Alu 2 148 0 2 1344 252 72 17 35 chr13 99593415 99593473 -20690839 + (GAAAA)n Simple_repeat Simple_repeat 3 59 0 2 1344 409 274 77 35 chr13 99593578 99593748 -20690564 + B4 SINE B4 5 181 -111 2 1344 1157 56 70 172 chr13 99593851 99593937 -20690375 + B2_Mm2 SINE B2 2 94 -101 2 1344 282 29 0 0 chr13 99593937 99593972 -20690340 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1344 1157 56 70 172 chr13 99593972 99593989 -20690323 + B2_Mm2 SINE B2 95 95 -100 2 1344 1082 85 43 0 chr13 99593989 99594130 -20690182 - B1_Mus2 SINE Alu 0 147 1 2 1344 1157 56 70 172 chr13 99594130 99594240 -20690072 + B2_Mm2 SINE B2 95 194 -1 2 1344 198 191 0 0 chr13 99594279 99594321 -20689991 + (CA)n Simple_repeat Simple_repeat 1 42 0 2 1344 456 67 0 0 chr13 99594963 99595023 -20689289 + (CA)n Simple_repeat Simple_repeat 1 60 0 2 1344 215 130 0 18 chr13 99595114 99595169 -20689143 + (TTTG)n Simple_repeat Simple_repeat 1 54 0 2 1344 870 192 7 0 chr13 99595528 99595674 -20688638 + B1_Mur4 SINE Alu 3 149 -1 2 1344 201 363 107 20 chr13 99595768 99595917 -20688395 - L2c LINE L2 -3 3384 3223 2 1344 811 109 87 112 chr13 99596045 99596161 -20688151 + B2_Mm2 SINE B2 1 112 -83 2 1344 1297 87 5 94 chr13 99596161 99596323 -20687989 - B2_Mm1t SINE B2 -7 186 36 2 1344 243 0 0 0 chr13 99596323 99596350 -20687962 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1344 1053 83 30 0 chr13 99596350 99596483 -20687829 - B1_Mm SINE Alu -9 138 2 2 1344 1297 87 5 94 chr13 99596483 99596522 -20687790 - B2_Mm1t SINE B2 -158 35 3 2 1344 811 109 87 112 chr13 99596522 99596601 -20687711 + B2_Mm2 SINE B2 113 191 -4 2 1344 628 160 73 40 chr13 99596631 99596682 -20687630 - B3 SINE B2 -86 130 81 2 1344 360 0 0 0 chr13 99596682 99596722 -20687590 + (TG)n Simple_repeat Simple_repeat 2 41 0 2 1344 628 160 73 40 chr13 99596722 99596794 -20687518 - B3 SINE B2 -136 80 4 2 1344 220 218 18 18 chr13 99596824 99596880 -20687432 - ID2 SINE ID -4 79 24 2 1344 574 152 82 33 chr13 99597168 99597290 -20687022 - B1_Mus2 SINE Alu -6 141 14 2 1344 435 253 10 10 chr13 99597324 99597420 -20686892 + PB1D10 SINE Alu 15 110 -7 2 1344 246 318 16 0 chr13 99597436 99597499 -20686813 + ID4_ SINE ID 18 81 -2 2 1344 240 287 106 36 chr13 99597558 99597749 -20686563 + MIRb SINE MIR 31 240 -28 2 1344 1689 37 21 0 chr13 99597927 99598116 -20686196 + B2_Mm1a SINE B2 1 193 0 2 1344 1139 56 0 0 chr13 99598191 99598335 -20685977 + B2_Mm2 SINE B2 2 145 -50 2 1344 1136 96 7 0 chr13 99598468 99598614 -20685698 - B1_Mm SINE Alu 0 147 1 2 1344 707 201 43 14 chr13 99598733 99598874 -20685438 + B3A SINE B2 1 145 -53 2 1344 22 35 0 0 chr13 99598874 99598903 -20685409 + AT_rich Low_complexity Low_complexity 1 29 0 2 1344 1244 55 0 7 chr13 99598966 99599114 -20685198 + B1_Mus2 SINE Alu 1 147 0 2 1344 261 0 0 0 chr13 99599114 99599143 -20685169 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1344 498 231 0 53 chr13 99599143 99599257 -20685055 + B1_Mur2 SINE Alu 42 149 0 2 1344 349 167 0 0 chr13 99599261 99599315 -20684997 + B1_Mur4 SINE Alu 2 55 -95 2 1344 269 194 31 31 chr13 99599262 99599326 -20684986 + ID_B1 SINE B4 84 147 -77 2 1344 839 111 0 95 chr13 99599329 99599519 -20684793 + (CAGAGA)n Simple_repeat Simple_repeat 2 173 0 2 1344 232 157 74 63 chr13 99599520 99599615 -20684697 + RLTR25B LTR ERVK 397 492 -536 2 1344 662 98 38 29 chr13 99599564 99599669 -20684643 + B1_Mus2 SINE Alu 42 147 0 2 1344 192 40 0 0 chr13 99599688 99599713 -20684599 + (CAA)n Simple_repeat Simple_repeat 2 26 0 2 1344 186 133 0 0 chr13 99599721 99599751 -20684561 + (GGAA)n Simple_repeat Simple_repeat 3 32 0 2 1344 414 202 25 0 chr13 99600005 99600084 -20684228 + ID4 SINE ID 2 82 -1 2 1344 458 283 40 85 chr13 99600242 99600443 -20683869 + B3A SINE B2 7 198 0 2 1344 1577 59 38 0 chr13 99600464 99600650 -20683662 + B2_Mm2 SINE B2 1 193 -2 2 1344 207 0 0 0 chr13 99600675 99600698 -20683614 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1344 1308 34 0 13 chr13 99600700 99600850 -20683462 - B1_Mus1 SINE Alu 0 148 1 2 1344 1420 74 21 21 chr13 99600869 99601061 -20683251 - B2_Mm2 SINE B2 -3 192 1 2 1344 850 255 20 78 chr13 99601126 99601330 -20682982 - B3 SINE B2 -24 192 1 2 1344 944 71 114 0 chr13 99601359 99601499 -20682813 + L1_Mus3 LINE L1 6476 6631 -7 2 1344 23 0 0 0 chr13 99601830 99601853 -20682459 + AT_rich Low_complexity Low_complexity 1 23 0 2 1344 41 58 0 0 chr13 99602091 99602160 -20682152 + AT_rich Low_complexity Low_complexity 1 69 0 2 1344 1138 36 7 0 chr13 99602185 99602325 -20681987 - B1_Mm SINE Alu -1 146 6 3 1344 637 211 44 75 chr13 99602186 99602345 -20681967 - B4 SINE B4 -69 223 70 3 1344 570 252 82 0 chr13 99602646 99602781 -20681531 - B1_Mur2 SINE Alu -3 146 1 3 1344 465 239 147 43 chr13 99603416 99603600 -20680712 - L1MA5A LINE L1 -418 5879 5677 3 1344 1163 62 14 14 chr13 99603775 99603921 -20680391 - B1_Mus1 SINE Alu -2 146 1 3 1344 403 100 12 0 chr13 99604992 99605056 -20679256 + B1_Mm SINE Alu 34 131 -16 3 1344 294 272 68 48 chr13 99605163 99605271 -20679041 + PB1D9 SINE Alu 2 134 -15 3 1344 1210 35 7 14 chr13 99605296 99605442 -20678870 + B1_Mus1 SINE Alu 4 148 0 3 1344 1162 58 0 0 chr13 99605479 99605616 -20678696 + B1_Mm SINE Alu 2 138 -9 3 1344 261 265 136 10 chr13 99606036 99606139 -20678173 + Lx8 LINE L1 5795 5910 -1563 3 1344 300 263 179 92 chr13 99606335 99606352 -20677960 - B3 SINE B2 0 216 201 3 1344 848 60 250 0 chr13 99606352 99606468 -20677844 - B1_Mm SINE Alu -2 145 1 3 1344 419 263 179 92 chr13 99606468 99606624 -20677688 - B2_Mm2 SINE B2 -16 200 27 3 1344 1205 62 21 0 chr13 99606624 99606768 -20677544 - B1_Mus1 SINE Alu 0 148 2 3 1344 559 219 36 21 chr13 99606793 99606933 -20677379 - B2_Mm2 SINE B2 -26 169 28 3 1344 22 0 0 0 chr13 99611897 99611919 -20672393 + AT_rich Low_complexity Low_complexity 1 22 0 3 1344 225 0 0 0 chr13 99612515 99612540 -20671772 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1344 231 220 16 48 chr13 99613993 99614055 -20670257 - MamRep605 Unknown Unknown -792 84 25 3 1345 243 0 0 0 chr13 99616764 99616791 -20667521 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1345 466 189 0 0 chr13 99617856 99617930 -20666382 + B3 SINE B2 2 75 -141 3 1345 228 82 78 39 chr13 99617971 99618022 -20666290 + B3A SINE B2 1 53 -145 3 1345 324 70 0 0 chr13 99618023 99618066 -20666246 + (CCAA)n Simple_repeat Simple_repeat 1 43 0 3 1345 881 255 10 14 chr13 99618232 99618274 -20666038 + B3 SINE B2 1 41 -175 3 1345 255 31 0 0 chr13 99618274 99618306 -20666006 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 3 1345 881 255 10 14 chr13 99618306 99618470 -20665842 + B3 SINE B2 42 206 -10 3 1345 1171 30 0 29 chr13 99618598 99618736 -20665576 - B1_Mus2 SINE Alu -13 134 1 3 1345 448 303 25 0 chr13 99618890 99619012 -20665300 + RSINE1 SINE B4 37 161 -4 3 1345 315 0 0 0 chr13 99623063 99623098 -20661214 + (TAA)n Simple_repeat Simple_repeat 2 36 0 3 1345 1483 61 28 0 chr13 99623136 99623317 -20660995 + B2_Mm1t SINE B2 2 187 -6 3 1345 261 83 0 0 chr13 99623798 99623834 -20660478 + (CA)n Simple_repeat Simple_repeat 1 36 0 3 1345 666 228 18 153 chr13 99624020 99624248 -20660064 + B3A SINE B2 1 197 -1 3 1345 245 306 54 0 chr13 99624364 99624475 -20659837 + L1MC5 LINE L1 7327 7443 -518 3 1345 401 216 216 0 chr13 99624763 99624860 -20659452 + PB1D9 SINE Alu 3 120 0 3 1345 292 247 0 83 chr13 99625679 99625763 -20658549 + MER2 DNA MER2_type 170 246 -99 3 1345 586 271 349 22 chr13 99625820 99626409 -20657903 + Lx8 LINE L1 6575 7356 -117 3 1345 539 271 20 41 chr13 99626418 99626564 -20657748 + B1_Mur2 SINE Alu 6 148 -1 3 1345 512 219 99 23 chr13 99627157 99627288 -20657024 - B1F1 SINE Alu -7 142 2 3 1345 1175 95 0 7 chr13 99627330 99627478 -20656834 - B1_Mus1 SINE Alu 0 148 2 3 1345 1084 153 22 28 chr13 99627498 99627679 -20656633 - B2_Mm2 SINE B2 -14 181 2 3 1345 406 250 148 16 chr13 99628653 99628836 -20655476 - B3 SINE B2 -6 210 4 3 1345 496 229 68 15 chr13 99628857 99628990 -20655322 - B1_Mur1 SINE Alu -7 142 3 3 1345 510 292 117 0 chr13 99628990 99629127 -20655185 - ID_B1 SINE B4 -28 196 44 3 1345 261 0 0 0 chr13 99629179 99629208 -20655104 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1345 247 299 30 0 chr13 99629227 99629294 -20655018 + ID4 SINE ID 2 70 -13 3 1345 408 219 186 47 chr13 99630966 99631095 -20653217 + B1F2 SINE Alu 2 148 -1 3 1345 207 0 0 0 chr13 99631351 99631374 -20652938 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1345 1290 61 0 0 chr13 99631374 99631521 -20652791 - B1_Mm SINE Alu 0 147 1 3 1345 850 198 72 53 chr13 99632561 99632615 -20651697 + B3 SINE B2 1 63 -153 3 1345 351 0 0 0 chr13 99632615 99632654 -20651658 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1345 850 198 72 53 chr13 99632654 99632807 -20651505 + B3 SINE B2 64 212 -4 3 1345 784 65 184 8 chr13 99632916 99633041 -20651271 - B1_Mus2 SINE Alu 0 147 1 3 1345 393 317 16 31 chr13 99633133 99633260 -20651052 + B1F1 SINE Alu 2 126 -23 3 1345 221 241 0 0 chr13 99633685 99633743 -20650569 + (CAT)n Simple_repeat Simple_repeat 3 60 0 3 1345 531 262 57 0 chr13 99635473 99635614 -20648698 - B1F SINE Alu 0 149 1 3 1345 338 248 158 25 chr13 99636319 99636439 -20647873 - B1_Mus1 SINE Alu -11 137 2 3 1345 22 0 0 0 chr13 99636527 99636549 -20647763 + AT_rich Low_complexity Low_complexity 1 22 0 3 1345 1245 62 0 0 chr13 99636670 99636816 -20647496 + B1_Mus1 SINE Alu 3 148 0 3 1345 222 148 0 0 chr13 99636816 99636870 -20647442 + (A)n Simple_repeat Simple_repeat 1 54 0 3 1345 203 0 0 36 chr13 99636895 99636923 -20647389 + (CAAAA)n Simple_repeat Simple_repeat 5 31 0 3 1345 475 268 110 43 chr13 99637237 99637401 -20646911 - B3A SINE B2 -22 176 2 3 1345 573 255 123 79 chr13 99637478 99637546 -20646766 - B4A SINE B4 0 292 221 3 1345 252 0 0 0 chr13 99637546 99637574 -20646738 + (CCA)n Simple_repeat Simple_repeat 1 28 0 3 1345 573 255 123 79 chr13 99637574 99637782 -20646530 - B4A SINE B4 -72 220 4 3 1345 27 0 0 0 chr13 99637796 99637823 -20646489 + AT_rich Low_complexity Low_complexity 1 27 0 3 1345 263 190 17 0 chr13 99638762 99638820 -20645492 + B1_Mur3 SINE Alu 43 101 -48 3 1345 274 148 313 35 chr13 99638943 99639058 -20645254 - B2_Mm2 SINE B2 -2 193 47 3 1345 1347 80 34 0 chr13 99639109 99639284 -20645028 - B2_Mm2 SINE B2 -14 181 1 3 1345 1617 151 78 26 chr13 99639327 99639674 -20644638 - Lx5 LINE L1 -21 7029 6665 3 1345 250 247 35 58 chr13 99640554 99640640 -20643672 - BLACKJACK DNA AcHobo -473 2471 2388 3 1345 409 260 20 40 chr13 99641111 99641211 -20643101 - PB1D9 SINE Alu -21 99 2 3 1345 1181 166 239 74 chr13 99641242 99641568 -20642744 + ORR1C2 LTR MaLR 3 382 -2 3 1345 393 172 0 0 chr13 99641622 99641680 -20642632 + URR1B DNA MER1_type 1 58 -167 3 1345 736 194 14 0 chr13 99641796 99641935 -20642377 - B1_Mur3 SINE Alu 0 149 9 3 1345 288 264 28 0 chr13 99641950 99642022 -20642290 - B2_Mm2 SINE B2 -83 112 39 3 1345 180 0 0 0 chr13 99642096 99642116 -20642196 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1345 497 246 28 50 chr13 99642116 99642257 -20642055 - B1_Mm SINE Alu -9 138 1 3 1345 637 231 37 0 chr13 99643098 99643232 -20641080 + B3 SINE B2 70 208 -8 3 1345 264 30 0 0 chr13 99643283 99643316 -20640996 + (GA)n Simple_repeat Simple_repeat 1 33 0 3 1345 439 165 127 0 chr13 99643316 99643395 -20640917 - B3 SINE B2 -127 89 1 3 1345 363 262 167 15 chr13 99643699 99643984 -20640328 + L1_Mur3 LINE L1 4682 5044 -1096 3 1345 669 267 109 16 chr13 99643982 99644350 -20639962 + L1_Mur3 LINE L1 5169 5614 -677 3 1345 351 0 0 0 chr13 99644813 99644852 -20639460 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1345 360 230 80 11 chr13 99645742 99645830 -20638482 + PB1 SINE Alu 14 107 -20 3 1345 714 151 56 35 chr13 99646755 99646899 -20637413 - B1_Mus1 SINE Alu 0 148 2 3 1345 225 94 0 0 chr13 99646953 99646985 -20637327 + (CAAG)n Simple_repeat Simple_repeat 2 33 0 3 1345 475 121 231 0 chr13 99647266 99647357 -20636955 - B3 SINE B2 -103 113 2 3 1345 269 318 34 0 chr13 99647543 99647631 -20636681 + PB1D9 SINE Alu 23 113 -7 3 1345 211 189 0 0 chr13 99647631 99647668 -20636644 + GA-rich Low_complexity Low_complexity 2 38 0 3 1345 408 198 154 29 chr13 99647744 99647848 -20636464 + PB1D10 SINE Alu 1 117 0 3 1345 613 308 23 28 chr13 99648120 99648334 -20635978 + B3 SINE B2 1 213 -3 3 1345 684 171 92 8 chr13 99649060 99649190 -20635122 + B1_Mur4 SINE Alu 1 141 -9 3 1345 212 0 0 35 chr13 99649190 99649219 -20635093 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 3 1345 1379 198 154 20 chr13 99649341 99649686 -20634626 + ORR1B1 LTR MaLR 1 391 -3 3 1345 505 161 108 85 chr13 99650108 99650237 -20634075 + B1_Mur1 SINE Alu 17 148 -1 3 1345 477 178 139 0 chr13 99650497 99650622 -20633690 + B1_Mus2 SINE Alu 1 142 -7 3 1345 251 315 69 43 chr13 99650834 99650950 -20633362 + PB1D9 SINE Alu 1 119 -1 3 1345 357 293 41 12 chr13 99651873 99652042 -20632270 - Lx8 LINE L1 -400 7073 6900 3 1345 869 125 0 0 chr13 99652066 99652194 -20632118 - B2_Mm2 SINE B2 -66 129 2 3 1345 442 240 137 24 chr13 99652353 99652477 -20631835 + B1F SINE Alu 1 138 -11 3 1345 1430 86 27 0 chr13 99652763 99652949 -20631363 + B2_Mm2 SINE B2 1 191 -4 3 1345 907 52 0 0 chr13 99653397 99653513 -20630799 - B1_Mus2 SINE Alu 0 147 32 3 1345 387 225 319 18 chr13 99654682 99654795 -20629517 - PB1D9 SINE Alu -1 147 1 3 1345 436 356 89 11 chr13 99654895 99655085 -20629227 - MER20 DNA MER1_type 0 219 15 3 1345 198 0 0 0 chr13 99655087 99655109 -20629203 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 3 1345 395 269 45 70 chr13 99655758 99655958 -20628354 + B3A SINE B2 1 195 -3 3 1345 1391 72 72 0 chr13 99656100 99656281 -20628031 + B2_Mm2 SINE B2 2 195 0 4 1345 731 256 121 12 chr13 99656410 99656667 -20627645 + Lx5 LINE L1 6079 6363 -687 4 1345 238 210 15 46 chr13 99656664 99656729 -20627583 + Lx6 LINE L1 6795 6857 -603 4 1345 880 267 33 16 chr13 99656800 99657069 -20627243 + Lx6 LINE L1 7082 7318 -142 4 1345 180 0 0 0 chr13 99657089 99657109 -20627203 + (CAAAAA)n Simple_repeat Simple_repeat 2 21 0 4 1345 950 113 30 0 chr13 99657129 99657262 -20627050 + B1_Mus2 SINE Alu 1 137 -10 4 1345 219 114 0 0 chr13 99659184 99659219 -20625093 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1345 615 27 0 0 chr13 99659219 99659291 -20625021 + (TC)n Simple_repeat Simple_repeat 1 73 0 4 1345 180 0 0 0 chr13 99659291 99659310 -20625002 + (CG)n Simple_repeat Simple_repeat 1 20 0 4 1345 24 0 0 0 chr13 99660384 99660408 -20623904 + GC_rich Low_complexity Low_complexity 1 24 0 4 1345 214 274 36 12 chr13 99660436 99660602 -20623710 + (CGG)n Simple_repeat Simple_repeat 1 170 0 4 1345 183 80 0 0 chr13 99660845 99660870 -20623442 + (CCCCAG)n Simple_repeat Simple_repeat 2 26 0 4 1345 708 276 68 135 chr13 99662594 99662979 -20621333 + ORR1E LTR MaLR 1 359 0 4 1345 243 0 0 0 chr13 99663333 99663360 -20620952 + (CCTG)n Simple_repeat Simple_repeat 1 27 0 4 1345 505 129 0 12 chr13 99663446 99663532 -20620780 + B1_Mus2 SINE Alu 63 147 0 4 1345 1172 56 7 34 chr13 99663543 99663691 -20620621 + B1_Mus1 SINE Alu 2 145 -3 4 1345 576 106 0 0 chr13 99663691 99663776 -20620536 + (CATA)n Simple_repeat Simple_repeat 4 88 0 4 1345 708 188 7 43 chr13 99663777 99663916 -20620396 + B1_Mus2 SINE Alu 6 139 -8 4 1345 275 293 59 29 chr13 99664057 99664159 -20620153 + ID_B1 SINE B4 70 174 -50 4 1345 333 283 39 29 chr13 99664075 99664177 -20620135 + PB1D10 SINE Alu 6 108 -9 4 1345 266 265 24 24 chr13 99664220 99664305 -20620007 - L1MB3 LINE L1 -45 6138 6054 4 1345 1102 73 15 0 chr13 99664365 99664502 -20619810 + B1_Mus1 SINE Alu 1 139 -9 4 1345 188 34 0 33 chr13 99664502 99664532 -20619780 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1345 225 65 0 0 chr13 99664601 99664632 -20619680 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1345 1073 44 0 7 chr13 99664632 99664763 -20619549 - B1_Mm SINE Alu -11 136 6 4 1345 242 239 51 0 chr13 99664661 99664778 -20619534 - ORR1B1-int LTR MaLR -755 754 632 4 1345 870 213 91 0 chr13 99664971 99665168 -20619144 + B3 SINE B2 1 215 -1 4 1345 201 147 0 0 chr13 99665344 99665378 -20618934 + (CGGGGG)n Simple_repeat Simple_repeat 1 34 0 4 1345 528 16 0 0 chr13 99665495 99665556 -20618756 + (CA)n Simple_repeat Simple_repeat 1 61 0 4 1345 478 176 42 52 chr13 99665559 99665655 -20618657 + B1_Mur1 SINE Alu 47 141 -8 4 1345 970 78 0 0 chr13 99665833 99665962 -20618350 + B1_Mus2 SINE Alu 19 147 0 4 1345 213 65 0 0 chr13 99665962 99665993 -20618319 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1345 837 223 40 35 chr13 99666004 99666204 -20618108 + B3 SINE B2 1 201 -15 4 1345 334 171 138 50 chr13 99666211 99666291 -20618021 + B1_Mur4 SINE Alu 27 113 -37 4 1345 258 218 0 18 chr13 99666291 99666347 -20617965 + B3 SINE B2 26 80 -136 4 1345 398 353 40 36 chr13 99666574 99666824 -20617488 - MER20B DNA MER1_type -351 432 182 4 1345 218 257 70 14 chr13 99666969 99667040 -20617272 - L2b LINE L2 -191 3184 3110 4 1345 466 232 35 42 chr13 99667392 99667536 -20616776 + B1_Mur1 SINE Alu 5 147 -2 4 1345 213 297 116 21 chr13 99667589 99667778 -20616534 - MIR SINE MIR -37 225 19 4 1345 1726 21 0 0 chr13 99668229 99668421 -20615891 - B2_Mm1a SINE B2 0 193 2 4 1345 231 298 0 0 chr13 99668514 99668571 -20615741 + G-rich Low_complexity Low_complexity 1 57 0 4 1345 268 196 0 0 chr13 99668688 99668739 -20615573 - ID4_ SINE ID -16 67 17 4 1345 307 292 112 37 chr13 99669295 99669501 -20614811 - MIRb SINE MIR -39 229 10 4 1345 331 293 50 0 chr13 99670179 99670278 -20614034 + B3A SINE B2 82 185 -13 4 1345 420 244 138 12 chr13 99671035 99671187 -20613125 + B3A SINE B2 1 167 -49 4 1345 1172 63 0 0 chr13 99671187 99671330 -20612982 + B1_Mus2 SINE Alu 5 147 0 4 1345 399 289 110 30 chr13 99671330 99671377 -20612935 + B3 SINE B2 168 216 0 4 1345 1023 79 43 0 chr13 99672072 99672212 -20612100 + B1_Mus2 SINE Alu 2 147 0 4 1345 613 217 85 6 chr13 99672408 99672584 -20611728 - B3 SINE B2 -4 212 23 4 1345 714 147 70 0 chr13 99673659 99673788 -20610524 + B1_Mus2 SINE Alu 1 138 -9 4 1345 234 0 0 0 chr13 99674662 99674688 -20609624 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1345 956 125 35 0 chr13 99675246 99675390 -20608922 + B1_Mur2 SINE Alu 1 149 0 4 1345 299 213 0 13 chr13 99675959 99676035 -20608277 + (CATA)n Simple_repeat Simple_repeat 2 76 0 4 1345 834 134 34 27 chr13 99676035 99676181 -20608131 - B1_Mus1 SINE Alu -1 147 1 4 1345 579 257 99 21 chr13 99676189 99676380 -20607932 - B4 SINE B4 -70 222 17 4 1345 1450 34 79 0 chr13 99676732 99676750 -20607562 - B2_Mm1a SINE B2 0 193 176 4 1345 207 0 0 0 chr13 99676750 99676773 -20607539 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 4 1345 1450 34 79 0 chr13 99676773 99676932 -20607380 - B2_Mm1a SINE B2 -18 175 3 4 1345 414 88 0 0 chr13 99677563 99677631 -20606681 + (TCTG)n Simple_repeat Simple_repeat 2 69 0 4 1345 333 0 0 0 chr13 99677631 99677668 -20606644 + (CA)n Simple_repeat Simple_repeat 1 37 0 4 1345 552 196 47 0 chr13 99677939 99678046 -20606266 + B3 SINE B2 2 113 -103 4 1345 348 215 208 62 chr13 99678169 99678313 -20605999 + B3 SINE B2 50 214 -2 4 1345 733 225 126 21 chr13 99678429 99678620 -20605692 + B3 SINE B2 1 211 -5 4 1345 22 35 0 0 chr13 99678718 99678747 -20605565 + AT_rich Low_complexity Low_complexity 1 29 0 4 1345 383 128 189 11 chr13 99679245 99679340 -20604972 + PB1D10 SINE Alu 5 116 -1 4 1345 218 136 23 0 chr13 99680148 99680192 -20604120 + (TATG)n Simple_repeat Simple_repeat 4 48 0 4 1345 597 153 17 177 chr13 99680951 99681126 -20603186 + B1_Mus2 SINE Alu 1 147 0 4 1345 509 189 19 9 chr13 99681226 99681333 -20602979 - PB1D9 SINE Alu -12 108 1 4 1345 377 191 64 0 chr13 99681608 99681702 -20602610 + B3 SINE B2 117 216 0 4 1345 788 225 68 0 chr13 99681758 99681949 -20602363 - B3 SINE B2 -7 209 6 4 1345 186 259 18 36 chr13 99682142 99682198 -20602114 + MIR SINE MIR 136 190 -72 4 1345 603 120 111 76 chr13 99682247 99682391 -20601921 - B1_Mur4 SINE Alu -1 149 1 4 1345 297 0 0 0 chr13 99682408 99682441 -20601871 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1345 423 321 151 3 chr13 99684532 99684842 -20599470 - MLT1A0 LTR MaLR -10 355 1 4 1345 180 0 0 0 chr13 99685143 99685163 -20599149 + (CAGG)n Simple_repeat Simple_repeat 2 21 0 4 1345 548 305 151 41 chr13 99685166 99685702 -20598610 - L2 LINE L2 -942 2477 1883 4 1345 731 277 94 55 chr13 99685753 99686062 -20598250 + MER2 DNA MER2_type 24 344 -1 4 1345 728 170 48 28 chr13 99686110 99686255 -20598057 + B1_Mur1 SINE Alu 1 148 -1 4 1345 389 174 35 0 chr13 99686289 99686375 -20597937 - RMER10A LTR ERVL 0 442 354 4 1345 353 110 49 0 chr13 99686413 99686495 -20597817 - RMER10A LTR ERVL -178 264 179 4 1345 409 314 155 0 chr13 99686524 99686750 -20597562 - L2 LINE L2 -1726 1693 1433 4 1345 5072 55 3 46 chr13 99686755 99686831 -20597481 + MT-int LTR MaLR 315 390 -708 4 1345 1232 34 0 13 chr13 99686831 99686980 -20597332 + B1_Mm SINE Alu 1 147 0 4 1345 5072 55 3 46 chr13 99686980 99687646 -20596666 + MT-int LTR MaLR 391 1025 -73 4 1345 186 330 146 54 chr13 99687672 99688063 -20596249 - L2 LINE L2 -2032 1387 961 4 1345 212 267 79 13 chr13 99688389 99688465 -20595847 + B1_Mur4 SINE Alu 35 115 -35 4 1345 807 202 91 0 chr13 99688516 99688714 -20595598 + B3 SINE B2 1 216 0 4 1345 718 212 118 10 chr13 99688754 99688949 -20595363 + B3 SINE B2 1 216 0 4 1345 605 210 13 101 chr13 99689243 99689402 -20594910 + B1_Mur1 SINE Alu 5 149 0 4 1345 555 235 29 0 chr13 99691590 99691726 -20592586 + B1_Mur3 SINE Alu 1 140 -9 4 1345 2283 107 3 55 chr13 99691751 99692096 -20592216 - ORR1A2 LTR MaLR 0 327 1 4 1345 5325 103 69 2 chr13 99692096 99692968 -20591344 - ORR1A2-int LTR MaLR 0 1963 1034 4 1345 628 172 67 0 chr13 99692959 99693093 -20591219 - ORR1A1 LTR MaLR -203 143 1 4 1345 1121 83 14 0 chr13 99693786 99693931 -20590381 + B1_Mus2 SINE Alu 1 147 0 4 1345 393 161 47 7 chr13 99694381 99694485 -20589827 - PB1D9 SINE Alu -1 149 37 4 1345 25 0 0 0 chr13 99696441 99696466 -20587846 + GC_rich Low_complexity Low_complexity 1 25 0 4 1345 562 191 19 0 chr13 99697068 99697173 -20587139 + PB1D9 SINE Alu 9 115 -5 4 1345 512 239 17 0 chr13 99697555 99697672 -20586640 + PB1D9 SINE Alu 2 120 0 4 1345 758 246 85 0 chr13 99697975 99698174 -20586138 + B3 SINE B2 1 216 0 4 1345 1189 49 0 7 chr13 99698422 99698567 -20585745 + B1_Mus2 SINE Alu 2 145 -2 4 1345 1446 56 17 0 chr13 99698606 99698784 -20585528 + B2_Mm2 SINE B2 1 181 -14 4 1345 270 0 0 0 chr13 99699148 99699178 -20585134 + (T)n Simple_repeat Simple_repeat 1 30 0 4 1345 1228 48 0 0 chr13 99699178 99699325 -20584987 - B1_Mus2 SINE Alu 0 147 1 4 1345 42 86 0 0 chr13 99699328 99699433 -20584879 + AT_rich Low_complexity Low_complexity 1 105 0 4 1345 975 260 93 45 chr13 99699908 99700327 -20583985 + L1MDa LINE L1 17 455 -6178 4 1345 375 284 80 85 chr13 99700420 99700620 -20583692 + L1MDa LINE L1 921 1119 -5514 4 1345 996 199 35 0 chr13 99700673 99700874 -20583438 + B3 SINE B2 4 211 -5 4 1345 533 182 20 0 chr13 99700943 99701042 -20583270 + PB1D9 SINE Alu 5 105 -15 4 1345 3819 159 96 16 chr13 99701104 99701156 -20583156 - RMER19B LTR ERVK -7 895 849 4 1345 2452 74 12 6 chr13 99701156 99701481 -20582831 - ORR1A2 LTR MaLR 0 327 1 5 1345 3819 159 96 16 chr13 99701481 99702156 -20582156 - RMER19B LTR ERVK -54 848 110 4 1345 227 283 41 52 chr13 99702240 99702337 -20581975 - RLTR17 LTR ERVK -260 432 337 5 1345 564 178 62 34 chr13 99702524 99702720 -20581592 - RMER19B LTR ERVK -553 184 3 4 1345 345 203 0 0 chr13 99702835 99702894 -20581418 + B1_Mur4 SINE Alu 11 69 -81 5 1345 395 245 9 29 chr13 99702902 99702914 -20581398 + B1F1 SINE Alu 47 58 -91 5 1345 1027 95 0 0 chr13 99702914 99703051 -20581261 - B1_Mm SINE Alu -10 137 1 5 1345 435 183 11 22 chr13 99703051 99703143 -20581169 + B1_Mur1 SINE Alu 59 149 0 5 1345 441 138 11 44 chr13 99703192 99703283 -20581029 + B1_Mur4 SINE Alu 11 98 -52 5 1345 625 147 194 0 chr13 99703271 99703400 -20580912 - RMER19B LTR ERVK -399 503 350 5 1345 1027 168 64 50 chr13 99703459 99703766 -20580546 + IAPEY3_LTR LTR ERVK 1 365 0 5 1345 405 59 29 29 chr13 99703768 99703838 -20580474 + B1_Mur3 SINE Alu 79 148 -1 5 1345 357 24 0 0 chr13 99703848 99703890 -20580422 + (GGAA)n Simple_repeat Simple_repeat 4 45 0 5 1345 8875 58 13 12 chr13 99703890 99705175 -20579137 - ORR1A1-int LTR MaLR -505 1287 1 5 1345 2581 52 5 95 chr13 99705175 99705555 -20578757 - ORR1A1 LTR MaLR 0 346 1 5 1345 5810 150 40 35 chr13 99705555 99706637 -20577675 - RMER16-int LTR ERVK -4317 1089 3 5 1345 1512 189 77 3 chr13 99706639 99706752 -20577560 - RMER16 LTR ERVK 0 533 414 5 1345 291 54 0 0 chr13 99706752 99706789 -20577523 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 5 1345 1512 160 104 2 chr13 99706789 99707040 -20577272 - RMER16 LTR ERVK -120 413 3 5 1345 1106 259 65 0 chr13 99707105 99707430 -20576882 + L1MB7 LINE L1 5837 6182 -2 5 1345 297 284 136 90 chr13 99707411 99707868 -20576444 + L1MDa LINE L1 1630 2107 -4526 5 1345 698 269 99 37 chr13 99707873 99708247 -20576065 + L1MDa LINE L1 3804 4200 -2337 5 1345 601 252 41 59 chr13 99708442 99708611 -20575701 - B3A SINE B2 -31 167 2 5 1345 221 207 32 128 chr13 99708674 99708768 -20575544 + MIRb SINE MIR 84 168 -100 5 1345 1143 93 23 11 chr13 99708841 99709034 -20575278 - B2_Mm2 SINE B2 -6 210 1 5 1345 27 29 0 0 chr13 99709267 99709301 -20575011 + AT_rich Low_complexity Low_complexity 1 34 0 5 1345 241 152 169 0 chr13 99709385 99709444 -20574868 - MTC LTR MaLR -1 420 352 5 1345 186 43 0 0 chr13 99709444 99709467 -20574845 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1345 1333 100 17 0 chr13 99709467 99709647 -20574665 - B2_Mm2 SINE B2 -12 183 1 5 1345 831 159 78 7 chr13 99709886 99710139 -20574173 - RLTR14 LTR ERV1 0 382 3 5 1345 372 306 9 26 chr13 99710418 99710532 -20573780 + RSINE1 SINE B4 4 115 -50 5 1345 342 224 0 0 chr13 99710823 99710908 -20573404 + GA-rich Low_complexity Low_complexity 4 88 0 5 1345 503 165 154 66 chr13 99711332 99711468 -20572844 + B1_Mur2 SINE Alu 2 149 0 5 1345 1225 41 0 7 chr13 99711487 99711621 -20572691 + B1_Mus2 SINE Alu 1 134 -13 5 1345 261 0 0 0 chr13 99711621 99711650 -20572662 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 5 1345 1225 41 0 7 chr13 99711650 99711663 -20572649 + B1_Mus2 SINE Alu 135 147 0 5 1345 353 215 12 25 chr13 99711706 99711787 -20572525 - ID4 SINE ID -2 81 2 5 1345 21 0 0 0 chr13 99712249 99712270 -20572042 + AT_rich Low_complexity Low_complexity 1 21 0 5 1345 211 0 57 29 chr13 99712346 99712381 -20571931 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 5 1345 1546 130 19 84 chr13 99712551 99712861 -20571451 + Lx4A LINE L1 6764 7053 -5 5 1345 234 0 0 0 chr13 99712861 99712887 -20571425 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 1345 225 319 14 0 chr13 99713214 99713286 -20571026 - ID4_ SINE ID -9 74 2 5 1345 358 248 83 30 chr13 99713296 99713429 -20570883 - ID_B1 SINE B4 -7 217 78 5 1345 326 253 86 1 chr13 99713485 99713588 -20570724 - MIRb SINE MIR -102 166 57 5 1345 1414 99 16 0 chr13 99714080 99714272 -20570040 - B2_Mm2 SINE B2 0 195 1 5 1345 334 308 33 33 chr13 99714470 99714621 -20569691 - MIR SINE MIR -23 239 89 5 1345 476 274 0 17 chr13 99715224 99715343 -20568969 - PB1D10 SINE Alu 0 117 1 5 1345 21 0 0 0 chr13 99715363 99715384 -20568928 + AT_rich Low_complexity Low_complexity 1 21 0 5 1345 204 40 0 0 chr13 99716198 99716223 -20568089 + (CA)n Simple_repeat Simple_repeat 1 25 0 5 1345 1102 158 46 14 chr13 99716569 99716788 -20567524 + URR1A DNA MER1_type 1 226 0 5 1345 21 0 0 0 chr13 99717019 99717040 -20567272 + AT_rich Low_complexity Low_complexity 1 21 0 5 1345 705 252 28 51 chr13 99717367 99717584 -20566728 + B3A SINE B2 1 212 -4 5 1345 329 284 11 11 chr13 99718368 99718457 -20565855 + PB1D10 SINE Alu 24 112 -5 5 1345 270 0 0 0 chr13 99718467 99718497 -20565815 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 5 1345 507 252 76 0 chr13 99718598 99718729 -20565583 + RSINE1 SINE B4 6 146 -19 5 1345 917 264 90 35 chr13 99718797 99719279 -20565033 + L1M3 LINE L1 4951 5468 -715 5 1345 1569 143 45 8 chr13 99719452 99719704 -20564608 - ORR1A2 LTR MaLR -34 293 32 5 1345 488 272 94 80 chr13 99719704 99719980 -20564332 - RLTR9A LTR ERVK 0 368 89 5 1345 517 241 106 40 chr13 99719980 99720131 -20564181 + RSINE1 SINE B4 3 163 -2 5 1345 23 0 0 0 chr13 99720149 99720172 -20564140 + AT_rich Low_complexity Low_complexity 1 23 0 5 1345 708 236 7 7 chr13 99720328 99720477 -20563835 + B1F2 SINE Alu 1 149 0 5 1345 703 209 15 0 chr13 99720663 99720797 -20563515 + B1_Mur2 SINE Alu 13 148 -1 5 1345 512 224 0 9 chr13 99720993 99721101 -20563211 - B1_Mur2 SINE Alu -7 142 36 5 1345 692 209 115 12 chr13 99721139 99721304 -20563008 - B3A SINE B2 -16 182 1 5 1345 676 154 2 36 chr13 99722470 99722598 -20561714 + MTC LTR MaLR 86 205 -202 5 1345 256 94 0 0 chr13 99722598 99722630 -20561682 + L1Md_F2 LINE L1 5555 5586 -297 5 1345 8327 40 5 0 chr13 99722630 99723617 -20560695 + L1Md_F2 LINE L1 5587 6578 -4 5 1345 1067 181 208 23 chr13 99723707 99723972 -20560340 + MTD LTR MaLR 92 405 -14 5 1345 331 299 168 38 chr13 99724106 99724315 -20559997 + LTR33A_ LTR ERVL 2 237 -283 5 1345 225 0 0 0 chr13 99724992 99725017 -20559295 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 5 1345 339 324 81 0 chr13 99725275 99725411 -20558901 - MER45R DNA Tip100 -976 605 459 5 1345 200 256 0 0 chr13 99725582 99725621 -20558691 + G-rich Low_complexity Low_complexity 1 39 0 5 1345 1906 164 137 8 chr13 99725621 99726001 -20558311 - RMER10A LTR ERVL -13 429 1 5 1345 387 232 26 46 chr13 99726343 99726444 -20557868 + PB1D10 SINE Alu 20 120 0 5 1345 342 0 0 0 chr13 99726458 99726496 -20557816 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1345 743 281 57 36 chr13 99726776 99727056 -20557256 - B4 SINE B4 -2 290 5 5 1345 247 209 83 69 chr13 99727097 99727169 -20557143 - B1F SINE Alu -7 142 70 5 1345 340 333 78 62 chr13 99727197 99727376 -20556936 - L1MC5 LINE L1 -370 7591 7410 5 1345 261 261 14 55 chr13 99727462 99727535 -20556777 - ID4 SINE ID -13 70 1 5 1345 819 312 24 45 chr13 99727535 99727867 -20556445 + MLT1A0 LTR MaLR 38 362 -3 5 1345 370 281 68 14 chr13 99728046 99728194 -20556118 - L1MC5 LINE L1 -817 7144 6989 5 1345 222 37 0 0 chr13 99728760 99728787 -20555525 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 5 1345 7859 89 9 16 chr13 99728787 99729097 -20555215 - Lx LINE L1 0 6654 6346 5 1345 3635 65 5 0 chr13 99729097 99729542 -20554770 + LTRIS5 LTR ERV1 1 447 0 5 1345 7859 108 10 11 chr13 99729542 99730762 -20553550 - Lx LINE L1 -309 6345 5131 5 1345 480 246 221 60 chr13 99731232 99731501 -20552811 + MLT2B1 LTR ERVL 179 527 -40 5 1345 258 239 0 0 chr13 99731505 99731576 -20552736 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 5 1345 458 339 48 12 chr13 99731771 99731938 -20552374 - MER104 DNA Tc2 0 181 9 5 1345 1027 126 0 0 chr13 99732011 99732154 -20552158 - B1_Mur4 SINE Alu -1 149 7 5 1345 374 268 20 80 chr13 99732037 99732187 -20552125 - MT2B LTR ERVL -323 278 138 5 1345 181 233 100 0 chr13 99732194 99732254 -20552058 - MIR SINE MIR -127 135 70 5 1345 384 309 202 20 chr13 99732290 99732637 -20551675 - MLT1F1 LTR MaLR -50 519 110 5 1345 2361 183 82 12 chr13 99732801 99733190 -20551122 + RMER5 LTR ERV1 15 439 -95 5 1345 2998 71 2 27 chr13 99733190 99733596 -20550716 + MTA_Mm LTR MaLR 1 396 0 5 1345 2361 183 82 12 chr13 99733596 99733692 -20550620 + RMER5 LTR ERV1 440 534 0 5 1345 506 333 0 107 chr13 99734441 99734560 -20549752 + RMER30 DNA MER1_type 2 104 -98 5 1345 1189 49 0 7 chr13 99734560 99734705 -20549607 - B1_Mus2 SINE Alu 0 147 4 5 1345 506 333 0 107 chr13 99734705 99734800 -20549512 + RMER30 DNA MER1_type 105 193 -9 5 1345 300 111 0 0 chr13 99735399 99735444 -20548868 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1345 852 115 7 48 chr13 99735565 99735711 -20548601 + URR1B DNA MER1_type 83 222 -3 5 1345 838 117 250 13 chr13 99735711 99735867 -20548445 + B2_Mm2 SINE B2 3 195 0 5 1345 700 172 51 29 chr13 99735949 99736087 -20548225 - B1_Mur1 SINE Alu -5 144 4 5 1345 214 257 12 86 chr13 99736211 99736292 -20548020 + B3A SINE B2 2 76 -122 5 1345 224 330 162 32 chr13 99736419 99736604 -20547708 - MIRb SINE MIR -6 262 54 5 1345 637 331 0 12 chr13 99736903 99737068 -20547244 + RSINE1 SINE B4 3 165 0 5 1345 728 288 19 19 chr13 99737099 99737315 -20546997 + ID_B1 SINE B4 1 216 -8 5 1345 389 109 16 0 chr13 99737750 99737814 -20546498 + (CCCCCT)n Simple_repeat Simple_repeat 6 70 0 5 1345 207 276 0 0 chr13 99737947 99738023 -20546289 + (TTA)n Simple_repeat Simple_repeat 1 76 0 5 1345 225 369 92 69 chr13 99738193 99738411 -20545901 + MLT1J LTR MaLR 211 433 -79 5 1345 22 0 0 0 chr13 99738501 99738523 -20545789 + AT_rich Low_complexity Low_complexity 1 22 0 5 1345 348 83 0 0 chr13 99738523 99738571 -20545741 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1345 333 81 188 31 chr13 99738577 99738641 -20545671 - MTD LTR MaLR -8 411 338 5 1345 562 125 84 23 chr13 99738647 99738778 -20545534 + MTD LTR MaLR 269 407 -12 5 1345 907 251 105 113 chr13 99739131 99739513 -20544799 + MTEa LTR MaLR 1 379 0 6 1345 576 0 0 0 chr13 99739595 99739659 -20544653 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 6 1345 301 219 25 88 chr13 99740738 99740818 -20543494 + RSINE1 SINE B4 91 165 0 6 1345 602 129 0 0 chr13 99740863 99740956 -20543356 - B1_Mur4 SINE Alu 0 150 58 6 1345 1037 331 63 28 chr13 99740988 99741445 -20542867 - MLT1F LTR MaLR -72 476 4 6 1345 818 226 65 15 chr13 99742296 99742561 -20541751 - ORR1D1 LTR MaLR -2 357 69 6 1345 1243 55 0 0 chr13 99742579 99742725 -20541587 - B1_Mus1 SINE Alu 0 148 3 6 1345 426 269 98 15 chr13 99742727 99742859 -20541453 - MTD LTR MaLR -241 178 36 6 1345 454 278 26 12 chr13 99742851 99742998 -20541314 + B3A SINE B2 63 216 0 6 1345 29 0 0 0 chr13 99743005 99743034 -20541278 + AT_rich Low_complexity Low_complexity 1 29 0 6 1345 239 231 159 40 chr13 99743068 99743194 -20541118 + L1MC LINE L1 2372 2512 -3634 6 1345 186 143 0 0 chr13 99743691 99743726 -20540586 + (G)n Simple_repeat Simple_repeat 1 35 0 6 1345 334 344 20 13 chr13 99744090 99744243 -20540069 + L1MC LINE L1 2138 2291 -3855 6 1345 968 228 52 104 chr13 99744263 99744357 -20539955 - MTD LTR MaLR 0 419 339 6 1345 1209 68 0 0 chr13 99744357 99744503 -20539809 - B1_Mus2 SINE Alu 0 147 2 6 1345 968 228 52 104 chr13 99744503 99744615 -20539697 - MTD LTR MaLR -81 338 227 6 1345 1857 155 31 6 chr13 99744615 99744933 -20539379 - ORR1A3 LTR MaLR 0 326 1 6 1345 968 228 52 104 chr13 99744933 99744994 -20539318 - MTD LTR MaLR -193 226 166 6 168 715 200 65 27 chr13 99745618 99745803 -20538509 + Lx5 LINE L1 6857 7048 -2 6 1346 2248 127 58 30 chr13 99745950 99746348 -20537964 - RLTR9E LTR ERVK 0 409 1 6 1346 292 236 136 0 chr13 99746708 99746818 -20537494 - MLT1J LTR MaLR -7 505 381 6 1346 580 240 83 6 chr13 99746961 99747129 -20537183 - B3 SINE B2 -9 186 1 6 1346 479 321 96 26 chr13 99747133 99747496 -20536816 + L1MB4 LINE L1 5628 6023 -160 6 1346 2015 112 28 40 chr13 99747496 99747822 -20536490 + ORR1A3 LTR MaLR 1 322 -4 6 1346 243 294 81 63 chr13 99747822 99747888 -20536424 + L1MB4 LINE L1 6024 6090 -93 6 1346 219 36 0 0 chr13 99748237 99748265 -20536047 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 6 1346 8832 101 51 9 chr13 99748430 99749754 -20534558 - Lx2B LINE L1 0 7000 5622 6 1346 8223 140 9 70 chr13 99749752 99750248 -20534064 + Lx2A1 LINE L1 4180 4667 -1210 6 1346 1251 48 0 0 chr13 99750248 99750394 -20533918 + B1_Mm SINE Alu 2 147 0 6 1346 8223 140 9 70 chr13 99750394 99750619 -20533693 + Lx2A1 LINE L1 4668 4867 -1010 6 1346 855 98 0 0 chr13 99750619 99750742 -20533570 + (TTTC)n Simple_repeat Simple_repeat 2 124 0 6 1346 1131 60 0 0 chr13 99750745 99750879 -20533433 - B1_Mm SINE Alu -12 135 2 6 1346 8223 140 9 70 chr13 99750879 99751055 -20533257 + Lx2A1 LINE L1 4868 5002 -875 6 1346 1110 82 0 13 chr13 99751055 99751204 -20533108 - B1_Mus2 SINE Alu 0 147 1 6 1346 8223 137 8 64 chr13 99751204 99751855 -20532457 + Lx2A1 LINE L1 5003 5645 -1363 6 1346 1110 138 5 52 chr13 99751882 99752073 -20532239 + B2_Mm1t SINE B2 1 182 -11 6 1346 243 0 0 0 chr13 99752499 99752526 -20531786 + (CA)n Simple_repeat Simple_repeat 1 27 0 6 1346 227 152 22 0 chr13 99752526 99752572 -20531740 + (TATATG)n Simple_repeat Simple_repeat 3 49 0 6 1346 316 307 68 61 chr13 99753158 99753321 -20530991 + MIR SINE MIR 46 209 -53 6 1346 387 143 63 0 chr13 99753725 99753788 -20530524 + B1_Mur2 SINE Alu 82 148 -1 6 1346 869 194 22 1 chr13 99753833 99754021 -20530291 + B3 SINE B2 1 198 0 6 1346 551 305 31 0 chr13 99754920 99755048 -20529264 + RSINE1 SINE B4 20 151 -14 6 1346 492 18 0 0 chr13 99755048 99755105 -20529207 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 1346 360 0 0 0 chr13 99755105 99755144 -20529168 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1346 401 270 120 0 chr13 99755254 99755354 -20528958 + U1 snRNA snRNA 52 163 -2 6 1346 1062 204 10 10 chr13 99755938 99756141 -20528171 - B3 SINE B2 -13 203 1 6 1346 5712 45 65 0 chr13 99756229 99756926 -20527386 - RLTR4_Mm LTR ERV1 0 742 1 6 1346 69553 11 2 0 chr13 99756926 99764513 -20519799 - RLTR4_MM-int LTR ERV1 0 7601 1 6 1346 5712 45 65 0 chr13 99764513 99765210 -20519102 - RLTR4_Mm LTR ERV1 0 742 1 6 1346 429 259 111 29 chr13 99765596 99765767 -20518545 + LTR79 LTR ERVL 322 506 -21 6 1346 937 122 354 88 chr13 99765888 99765947 -20518365 - ORR1A4 LTR MaLR 0 329 288 6 1346 1210 62 0 0 chr13 99765947 99766093 -20518219 - B1_Mm SINE Alu 0 147 2 6 1346 937 122 354 88 chr13 99766093 99766293 -20518019 - ORR1A4 LTR MaLR -42 287 1 6 1346 919 140 22 0 chr13 99767712 99767848 -20516464 + B1_Mur4 SINE Alu 5 143 -7 6 1346 239 290 32 0 chr13 99768805 99768867 -20515445 - MIRc SINE MIR -181 87 24 6 1346 993 156 28 28 chr13 99769024 99769202 -20515110 + URR1A DNA MER1_type 45 222 -4 6 1346 1580 33 6 0 chr13 99769653 99769836 -20514476 + B2_Mm1t SINE B2 2 185 -8 6 1346 768 223 0 26 chr13 99769856 99770008 -20514304 + B1_Mus1 SINE Alu 1 148 0 6 1346 951 264 67 75 chr13 99770493 99770515 -20513797 - ORR1E LTR MaLR -2 357 340 6 1346 1976 138 66 17 chr13 99770515 99770863 -20513449 + ORR1B2 LTR MaLR 1 365 -2 6 1346 951 264 67 75 chr13 99770863 99771200 -20513112 - ORR1E LTR MaLR -20 339 1 6 1346 4681 50 2 12 chr13 99771381 99771949 -20512363 - LTRIS2 LTR ERV1 0 564 3 6 1346 1929 104 22 44 chr13 99772164 99772485 -20511827 + IAPLTR2b LTR ERVK 1 314 -13 6 1346 2644 106 113 39 chr13 99772702 99772837 -20511475 - MT2C_Mm LTR ERVL 0 475 291 6 1346 474 18 0 0 chr13 99772837 99772892 -20511420 + (GA)n Simple_repeat Simple_repeat 1 55 0 6 1346 2644 106 113 39 chr13 99772892 99773198 -20511114 - MT2C_Mm LTR ERVL -185 290 1 6 1346 338 61 20 0 chr13 99773315 99773364 -20510948 + (TC)n Simple_repeat Simple_repeat 1 50 0 6 1346 2209 129 28 176 chr13 99773364 99773940 -20510372 + RLTR1B LTR ERV1 2 512 0 6 1346 836 158 36 0 chr13 99773958 99774097 -20510215 - B1_Mur4 SINE Alu -6 144 1 6 1346 198 0 0 0 chr13 99774194 99774216 -20510096 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 6 1346 619 206 42 0 chr13 99774216 99774335 -20509977 - B1_Mur1 SINE Alu -12 137 14 6 1346 1120 217 108 60 chr13 99775281 99775522 -20508790 - ORR1E LTR MaLR -10 349 93 6 1346 1427 137 9 0 chr13 99775522 99775741 -20508571 + URR1B DNA MER1_type 5 225 0 6 1346 1120 217 108 60 chr13 99775741 99775832 -20508480 - ORR1E LTR MaLR -267 92 1 6 1346 400 324 95 60 chr13 99776285 99776600 -20507712 - MLT2B2 LTR ERVL -133 382 57 6 1346 275 152 0 33 chr13 99776628 99776689 -20507623 + C-rich Low_complexity Low_complexity 4 62 0 6 1346 396 0 0 0 chr13 99776695 99776739 -20507573 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1346 180 0 0 0 chr13 99776739 99776758 -20507554 + (CG)n Simple_repeat Simple_repeat 2 21 0 6 1346 183 316 25 50 chr13 99778644 99778724 -20505588 - MIR SINE MIR -42 220 143 6 1346 364 228 114 38 chr13 99778724 99778856 -20505456 - RMER1C Other Other 0 1342 1201 6 1346 221 204 0 22 chr13 99779730 99779775 -20504537 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 6 1346 873 268 65 50 chr13 99779787 99780188 -20504124 + L1MEc LINE L1 185 591 -5809 6 1346 282 262 108 31 chr13 99780354 99780484 -20503828 + L1MA10 LINE L1 6186 6325 -9 6 1346 1081 250 55 11 chr13 99780510 99780781 -20503531 + Lx8 LINE L1 7189 7471 -2 6 1346 664 270 92 0 chr13 99780883 99781057 -20503255 - B3A SINE B2 -1 197 8 6 1346 226 241 54 65 chr13 99781058 99781151 -20503161 - Tigger15a DNA TcMar -151 564 473 6 1346 579 247 68 25 chr13 99781174 99781336 -20502976 + Lx8 LINE L1 7157 7325 -148 6 1346 317 34 33 33 chr13 99781360 99781421 -20502891 + (TG)n Simple_repeat Simple_repeat 2 62 0 6 1346 528 71 37 55 chr13 99781473 99781637 -20502675 + (TG)n Simple_repeat Simple_repeat 1 161 0 6 1346 219 103 0 0 chr13 99782528 99782567 -20501745 + (C)n Simple_repeat Simple_repeat 1 39 0 6 1346 1614 16 21 16 chr13 99783327 99783500 -20500812 + B2_Mm1a SINE B2 2 178 -15 6 1346 234 0 0 0 chr13 99783500 99783526 -20500786 + (TAAAA)n Simple_repeat Simple_repeat 1 26 0 6 1346 1614 16 21 16 chr13 99783526 99783543 -20500769 + B2_Mm1a SINE B2 179 193 0 6 1346 252 0 0 0 chr13 99783589 99783617 -20500695 + (TG)n Simple_repeat Simple_repeat 2 29 0 6 1346 920 310 50 27 chr13 99783637 99783896 -20500416 - B4A SINE B4 -26 266 2 6 1346 605 216 137 61 chr13 99783948 99784145 -20500167 - B3 SINE B2 0 216 5 6 1346 261 0 0 0 chr13 99784156 99784185 -20500127 + (CATAT)n Simple_repeat Simple_repeat 4 32 0 6 1346 863 163 0 58 chr13 99784215 99784371 -20499941 - B1_Mur1 SINE Alu 0 149 3 6 1346 300 371 112 10 chr13 99784767 99784963 -20499349 + MIRb SINE MIR 30 245 -23 6 1346 1001 56 8 0 chr13 99785342 99785467 -20498845 + B1_Mus1 SINE Alu 22 147 -1 6 1346 473 283 0 0 chr13 99785500 99785599 -20498713 + RSINE1 SINE B4 2 100 -65 6 1346 324 0 0 0 chr13 99785772 99785808 -20498504 + (CA)n Simple_repeat Simple_repeat 2 37 0 6 1346 920 109 66 0 chr13 99786853 99786990 -20497322 + B1_Mus2 SINE Alu 2 147 0 6 1346 1125 234 5 0 chr13 99787317 99787531 -20496781 + B3 SINE B2 1 215 -1 6 1346 1110 90 11 11 chr13 99787703 99787882 -20496430 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 6 1346 332 43 22 0 chr13 99787983 99788029 -20496283 + (CACCC)n Simple_repeat Simple_repeat 5 51 0 6 1346 461 214 0 0 chr13 99789410 99789494 -20494818 - PB1D10 SINE Alu 0 117 34 6 1346 1093 73 0 0 chr13 99789594 99789731 -20494581 + B1_Mus2 SINE Alu 1 137 -10 6 1346 396 0 0 0 chr13 99789731 99789775 -20494537 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 6 1346 237 259 34 34 chr13 99790187 99790275 -20494037 + MLT1J LTR MaLR 365 452 -60 6 1346 339 341 118 5 chr13 99790300 99790521 -20493791 + MIR SINE MIR 17 262 0 6 1346 231 114 0 0 chr13 99791675 99791710 -20492602 + (CATG)n Simple_repeat Simple_repeat 1 35 0 6 1346 239 301 95 19 chr13 99791730 99791835 -20492477 - RMER12 LTR ERVK -463 859 747 6 1346 26 0 0 0 chr13 99792356 99792382 -20491930 + AT_rich Low_complexity Low_complexity 1 26 0 6 1346 273 29 0 0 chr13 99792730 99792764 -20491548 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 7 1346 462 187 142 126 chr13 99793098 99793146 -20491166 - B2_Mm2 SINE B2 -2 193 145 7 1346 375 73 0 0 chr13 99793146 99793201 -20491111 + (TATG)n Simple_repeat Simple_repeat 4 58 0 7 1346 564 187 142 126 chr13 99793201 99793342 -20490970 - B3 SINE B2 -51 144 1 7 1346 572 327 53 4 chr13 99793826 99794053 -20490259 + Charlie23a DNA MER1_type 102 339 0 7 1346 373 320 28 51 chr13 99794176 99794354 -20489958 - MIR3 SINE MIR -31 177 4 7 1346 191 324 14 14 chr13 99794509 99794578 -20489734 - MIRb SINE MIR -117 151 83 7 1346 1257 76 20 94 chr13 99794622 99794825 -20489487 + B2_Mm2 SINE B2 2 189 -6 7 1346 426 274 0 0 chr13 99794835 99794919 -20489393 - ID_B1 SINE B4 -6 218 135 7 1346 777 258 53 106 chr13 99795239 99795601 -20488711 - MLT1B LTR MaLR -1 389 23 7 1346 234 0 0 0 chr13 99795889 99795915 -20488397 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1346 310 274 67 36 chr13 99796104 99796297 -20488015 - L1M5 LINE L1 -1570 4576 4378 7 1346 376 266 0 41 chr13 99796344 99796442 -20487870 - RSINE1 SINE B4 -65 100 7 7 1346 778 129 76 0 chr13 99796852 99796984 -20487328 - B1_Mus1 SINE Alu -6 142 1 7 1346 762 271 64 5 chr13 99797092 99797296 -20487016 - B4A SINE B4 0 292 77 7 1346 382 136 0 0 chr13 99797296 99797355 -20486957 - RMER1C Other Other -15 1327 1269 7 1346 359 278 195 72 chr13 99798433 99798766 -20485546 - ORR1D1 LTR MaLR 0 374 1 7 1346 297 230 91 11 chr13 99799124 99799212 -20485100 - Tigger7 DNA MER2_type -8 2483 2389 7 1346 974 222 22 61 chr13 99799222 99799534 -20484778 + RMER10A LTR ERVL 1 300 -142 7 1346 552 171 5 49 chr13 99799534 99799555 -20484757 + C-rich Low_complexity Low_complexity 162 180 0 7 1346 1245 96 0 0 chr13 99799555 99799733 -20484579 + (TCCCC)n Simple_repeat Simple_repeat 3 180 0 7 1346 552 171 5 49 chr13 99799733 99799895 -20484417 + C-rich Low_complexity Low_complexity 6 161 0 7 1346 512 230 78 33 chr13 99800045 99800198 -20484114 - Tigger7 DNA MER2_type -111 2380 2221 7 1346 760 264 173 16 chr13 99800194 99800506 -20483806 - Tigger7 DNA MER2_type -2060 431 71 7 1346 782 138 7 28 chr13 99802249 99802391 -20481921 - ORR1B1 LTR MaLR -228 166 28 7 1346 459 0 0 0 chr13 99803046 99803097 -20481215 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1346 450 36 0 0 chr13 99803202 99803258 -20481054 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1346 202 54 108 0 chr13 99803259 99803296 -20481016 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 7 1346 796 224 23 42 chr13 99804911 99805125 -20479187 - B3 SINE B2 -6 210 1 7 1346 216 0 0 0 chr13 99805424 99805448 -20478864 + (TTAA)n Simple_repeat Simple_repeat 1 24 0 7 1346 2051 96 109 15 chr13 99805448 99805662 -20478650 - Lx3_Mus LINE L1 -14 6995 6750 7 1346 3139 73 94 51 chr13 99805662 99806153 -20478159 + RLTR1B LTR ERV1 1 512 0 7 1346 2051 96 109 15 chr13 99806153 99806259 -20478053 - Lx3_Mus LINE L1 -260 6749 6644 7 1346 429 310 63 19 chr13 99806476 99806634 -20477678 - LTR40b LTR ERVL -233 229 65 7 1346 1840 165 8 41 chr13 99807269 99807673 -20476639 + ORR1B2 LTR MaLR 1 357 -21 7 1346 482 353 62 41 chr13 99808337 99808727 -20475585 - MER67A LTR ERV1 -143 400 3 7 1346 647 312 54 0 chr13 99809547 99809752 -20474560 + MIR SINE MIR 41 256 -6 7 1346 271 244 53 43 chr13 99809950 99810044 -20474268 - 7SK RNA RNA -79 252 158 7 1346 1814 162 75 20 chr13 99810048 99810445 -20473867 - ORR1B1 LTR MaLR -8 386 1 7 1346 701 289 19 0 chr13 99810445 99810601 -20473711 - 7SK RNA RNA -169 162 4 7 1346 243 296 0 0 chr13 99811600 99811654 -20472658 - ID4_ SINE ID -8 75 22 7 1346 320 308 35 10 chr13 99811687 99811802 -20472510 - PB1D10 SINE Alu -25 124 7 7 1346 506 269 0 0 chr13 99811828 99811932 -20472380 - PB1D10 SINE Alu -13 104 1 7 1346 196 349 24 12 chr13 99812970 99813054 -20471258 + MIRb SINE MIR 89 173 -95 7 1346 584 265 112 14 chr13 99813058 99813272 -20471040 + MER2 DNA MER2_type 15 249 -96 7 1346 287 307 67 11 chr13 99813466 99813555 -20470757 - L2a LINE L2 -1 3425 3281 7 1346 317 315 154 0 chr13 99813584 99813714 -20470598 - HAL1-3A_ME LINE L1 -425 2433 2284 7 1346 239 203 17 0 chr13 99813724 99813783 -20470529 + CT-rich Low_complexity Low_complexity 2 61 0 7 1346 551 15 15 0 chr13 99813796 99813864 -20470448 + (TTCC)n Simple_repeat Simple_repeat 3 71 0 7 1346 1716 170 72 39 chr13 99814615 99814977 -20469335 - ORR1D1 LTR MaLR 0 374 1 7 1346 320 359 1 11 chr13 99814986 99815123 -20469189 - MIR SINE MIR -71 197 64 7 1346 1006 267 69 0 chr13 99815152 99815399 -20468913 + B4A SINE B4 2 265 -27 7 1346 462 36 0 0 chr13 99815402 99815458 -20468854 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1346 616 316 55 71 chr13 99815755 99816120 -20468192 + ORR1E LTR MaLR 1 359 0 7 1346 259 334 172 31 chr13 99816716 99816986 -20467326 - LTR16A LTR ERVL -85 366 54 7 1346 293 333 26 18 chr13 99817956 99818069 -20466243 + LTR33B LTR ERVL 384 497 -6 7 1346 306 261 71 56 chr13 99818121 99818247 -20466065 - L2c LINE L2 -5 3382 3255 7 1346 1210 56 0 0 chr13 99818449 99818593 -20465719 - B1_Mus2 SINE Alu -2 145 2 7 1346 396 291 122 28 chr13 99818767 99818947 -20465365 - LTR40c LTR ERVL -254 211 15 7 1346 281 203 99 99 chr13 99818999 99819141 -20465171 + MER103 DNA DNA 1 142 -24 7 1346 38 0 0 0 chr13 99819232 99819270 -20465042 + AT_rich Low_complexity Low_complexity 1 38 0 7 1346 186 103 0 0 chr13 99820162 99820191 -20464121 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1346 646 250 50 0 chr13 99820216 99820356 -20463956 - RSINE1 SINE B4 -16 149 3 7 1346 789 267 76 25 chr13 99821245 99821519 -20462793 + B3 SINE B2 1 216 0 7 1346 21 0 0 0 chr13 99821522 99821543 -20462769 + AT_rich Low_complexity Low_complexity 1 21 0 7 1346 215 0 0 125 chr13 99821581 99821621 -20462691 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 7 1346 1147 108 0 0 chr13 99821622 99821779 -20462533 - B2_Mm2 SINE B2 -37 158 2 7 1346 276 342 17 0 chr13 99821789 99821906 -20462406 - L1MB2 LINE L1 -53 6118 6000 7 1346 3330 24 39 0 chr13 99822312 99822693 -20461619 + MTA_Mm LTR MaLR 1 396 0 7 1346 567 164 16 8 chr13 99823080 99823209 -20461103 + CT-rich Low_complexity Low_complexity 2 131 0 7 1346 505 275 18 0 chr13 99823245 99823354 -20460958 - PB1D7 SINE Alu -8 112 2 7 1346 219 88 0 0 chr13 99823662 99823696 -20460616 + (TA)n Simple_repeat Simple_repeat 2 35 0 7 1346 260 349 7 85 chr13 99824174 99824315 -20459997 - MLT1K LTR MaLR -305 290 161 7 1346 411 260 90 7 chr13 99825169 99825324 -20458988 - MER33 DNA MER1_type -11 313 146 7 1346 209 196 0 19 chr13 99825325 99825377 -20458935 + (TA)n Simple_repeat Simple_repeat 2 52 0 7 1346 271 300 22 0 chr13 99825395 99825485 -20458827 - MER33 DNA MER1_type -197 127 36 7 1346 192 77 0 0 chr13 99826250 99826276 -20458036 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 1346 299 270 209 31 chr13 99828130 99828321 -20455991 + MIRb SINE MIR 14 238 -30 7 1346 1132 162 38 42 chr13 99828926 99829139 -20455173 - URR1A DNA MER1_type -9 217 6 7 1346 849 242 5 31 chr13 99829452 99829674 -20454638 + B3 SINE B2 1 216 0 7 1346 449 325 11 6 chr13 99829774 99829902 -20454410 - PB1D10 SINE Alu -21 128 3 7 1346 477 0 0 0 chr13 99830369 99830422 -20453890 + (TC)n Simple_repeat Simple_repeat 2 54 0 7 1346 186 43 0 0 chr13 99830422 99830444 -20453868 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1346 455 284 20 153 chr13 99830449 99830703 -20453609 + MTE2a LTR MaLR 96 342 -77 7 1346 261 0 0 0 chr13 99831132 99831161 -20453151 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 7 1346 1752 162 28 9 chr13 99831431 99831748 -20452564 + RMER4B LTR ERVK 1 323 -262 7 1346 23 0 0 0 chr13 99831836 99831859 -20452453 + AT_rich Low_complexity Low_complexity 1 23 0 7 1346 435 73 0 0 chr13 99831925 99831980 -20452332 - ORR1B1 LTR MaLR 0 394 340 7 1346 209 33 33 0 chr13 99831980 99832010 -20452302 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1346 312 102 0 0 chr13 99832013 99832062 -20452250 - B1_Mur3 SINE Alu -6 143 95 7 1346 752 118 0 16 chr13 99832050 99832171 -20452141 - ORR1B1 LTR MaLR -275 119 1 7 1346 1168 81 0 6 chr13 99834588 99834761 -20449551 - L1VL2 LINE L1 -627 2988 2817 7 1346 7916 66 20 64 chr13 99834758 99835085 -20449227 - L1VL2 LINE L1 -1497 2118 1842 7 1346 1190 82 0 0 chr13 99835085 99835232 -20449080 - B1_Mus1 SINE Alu 0 148 2 7 1346 7916 68 29 80 chr13 99835232 99837072 -20447240 - L1VL2 LINE L1 -1774 1841 67 7 1346 305 335 38 86 chr13 99837404 99837590 -20446722 + MLT1J LTR MaLR 224 400 -112 7 1346 1523 205 118 3 chr13 99837603 99837941 -20446371 + MTEa LTR MaLR 3 379 0 7 1346 2106 121 91 17 chr13 99838047 99838400 -20445912 - ORR1B1 LTR MaLR -14 380 2 7 1346 367 252 19 28 chr13 99838606 99838712 -20445600 - MLT1A1 LTR MaLR 0 408 304 7 1346 236 278 55 131 chr13 99838867 99839012 -20445300 - MLT1A1 LTR MaLR -271 137 4 7 1346 234 0 0 0 chr13 99839105 99839131 -20445181 + (A)n Simple_repeat Simple_repeat 1 26 0 7 1346 211 88 29 0 chr13 99839137 99839171 -20445141 - B4A SINE B4 -213 79 45 7 1346 944 234 255 19 chr13 99839183 99839505 -20444807 - MTD LTR MaLR -20 399 2 7 1346 1150 77 0 0 chr13 99841181 99841324 -20442988 + B1_Mus1 SINE Alu 3 145 -3 7 1346 288 137 0 0 chr13 99841324 99841375 -20442937 + (TAAG)n Simple_repeat Simple_repeat 1 51 0 7 1346 333 301 107 27 chr13 99841611 99841761 -20442551 + LTR16A LTR ERVL 211 372 -79 7 1346 1479 211 73 51 chr13 99842325 99842512 -20441800 + MTD LTR MaLR 1 194 -225 7 1346 459 0 0 0 chr13 99842512 99842563 -20441749 + (GA)n Simple_repeat Simple_repeat 2 52 0 7 1346 1479 211 73 51 chr13 99842563 99842785 -20441527 + MTD LTR MaLR 195 418 -1 7 1346 309 164 0 18 chr13 99844729 99844785 -20439527 - ORR1B1 LTR MaLR -1 366 312 7 1346 703 249 5 80 chr13 99844785 99844887 -20439425 - RMER1B Other Other -16 1050 959 7 1346 2284 91 58 0 chr13 99844887 99845196 -20439116 - ORR1A2 LTR MaLR 0 327 1 8 1346 703 249 5 80 chr13 99845196 99845294 -20439018 - RMER1B Other Other -108 958 865 7 1346 1919 145 75 12 chr13 99845294 99845628 -20438684 - ORR1B1 LTR MaLR -39 355 1 7 1346 738 228 93 0 chr13 99847079 99847272 -20437040 - B3 SINE B2 -3 213 3 8 1346 216 0 0 0 chr13 99847817 99847841 -20436471 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1346 1177 29 0 14 chr13 99847841 99847981 -20436331 - B1_Mm SINE Alu -9 138 1 8 1346 381 245 0 0 chr13 99848379 99848481 -20435831 + (TA)n Simple_repeat Simple_repeat 1 102 0 8 1346 201 74 0 0 chr13 99848484 99848511 -20435801 + (CA)n Simple_repeat Simple_repeat 1 27 0 8 1346 288 250 35 12 chr13 99849164 99849249 -20435063 - L3 LINE CR1 -282 4207 4121 8 1346 436 299 0 8 chr13 99849430 99849548 -20434764 - L3 LINE CR1 -582 3907 3791 8 1346 422 291 0 25 chr13 99849566 99849686 -20434626 - MIRb SINE MIR -4 264 148 8 1346 287 286 13 13 chr13 99850779 99850857 -20433455 - ID4_ SINE ID 0 83 6 8 1346 6278 105 20 25 chr13 99852062 99853025 -20431287 + RMER17B LTR ERVK 1 958 0 8 1346 253 118 19 19 chr13 99853400 99853452 -20430860 + (TA)n Simple_repeat Simple_repeat 1 52 0 8 1346 302 264 21 154 chr13 99854346 99854489 -20429823 - L1M LINE L1 -2664 5378 5255 8 1346 201 178 0 0 chr13 99854504 99854549 -20429763 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1346 1290 89 0 0 chr13 99854549 99855259 -20429053 + (CCA)n Simple_repeat Simple_repeat 1 710 0 8 1346 1104 111 0 1 chr13 99855276 99855955 -20428357 + (CCA)n Simple_repeat Simple_repeat 1 677 0 8 1346 447 78 0 0 chr13 99855976 99856040 -20428272 + (TCCC)n Simple_repeat Simple_repeat 2 65 0 8 1346 231 36 0 0 chr13 99856353 99856381 -20427931 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 8 1346 1985 190 77 3 chr13 99856573 99856948 -20427364 - MTD LTR MaLR -8 411 9 8 1346 423 0 0 0 chr13 99856993 99857040 -20427272 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1346 183 80 0 0 chr13 99858013 99858038 -20426274 + (G)n Simple_repeat Simple_repeat 1 25 0 8 1346 615 260 88 0 chr13 99858048 99858298 -20426014 + L1MA8 LINE L1 5062 5333 -810 8 1346 481 249 31 101 chr13 99858298 99858599 -20425713 - MTEb LTR MaLR 0 379 141 8 1346 1500 208 38 21 chr13 99858609 99858972 -20425340 + MT2A LTR ERVL 4 491 -2 8 1346 299 322 99 13 chr13 99859054 99859205 -20425107 - MLT1A0 LTR MaLR -63 302 139 8 1346 3107 50 0 0 chr13 99859326 99859708 -20424604 - L1Md_F2 LINE L1 0 6582 6201 8 1346 2002 47 0 0 chr13 99859708 99859942 -20424370 + L1Md_F2 LINE L1 5971 6204 -378 8 1346 331 269 0 0 chr13 99859942 99860009 -20424303 - MTEb LTR MaLR -312 67 1 8 1346 791 291 257 12 chr13 99860012 99860649 -20423663 + L1MA8 LINE L1 5339 6131 -160 8 1346 964 137 15 73 chr13 99860696 99860901 -20423411 - B2_Mm2 SINE B2 -1 194 2 8 1346 274 289 11 0 chr13 99860902 99860992 -20423320 + L1MA8 LINE L1 6177 6267 -24 8 1346 713 270 33 0 chr13 99861122 99861274 -20423038 + B3A SINE B2 1 157 -41 8 1346 450 0 0 0 chr13 99861275 99861325 -20422987 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 1346 650 210 34 27 chr13 99861375 99861522 -20422790 - B1_Mur3 SINE Alu -1 148 1 8 1346 194 33 0 62 chr13 99862039 99862071 -20422241 + (TGGGGG)n Simple_repeat Simple_repeat 5 34 0 8 1346 207 0 0 0 chr13 99862980 99863003 -20421309 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1346 445 217 28 9 chr13 99864341 99864449 -20419863 + PB1D7 SINE Alu 11 120 0 8 1346 477 0 0 0 chr13 99864859 99864912 -20419400 + (TTTTA)n Simple_repeat Simple_repeat 2 54 0 8 1346 1917 150 16 3 chr13 99864984 99865305 -20419007 - MTC LTR MaLR 0 421 97 8 1346 353 181 28 0 chr13 99865298 99865370 -20418942 - URR1B DNA MER1_type -63 162 89 8 1346 264 252 190 9 chr13 99865308 99865424 -20418888 + CYRA11_Mm Unknown Y-chromosome 248 384 -233 8 1346 441 210 0 0 chr13 99865545 99865626 -20418686 + ID4_ SINE ID 3 83 0 8 1346 828 280 103 33 chr13 99866250 99866523 -20417789 + B4 SINE B4 1 292 0 8 1346 402 21 0 0 chr13 99866828 99866875 -20417437 + (TG)n Simple_repeat Simple_repeat 2 48 0 8 1346 291 114 0 0 chr13 99867461 99867505 -20416807 + (CAT)n Simple_repeat Simple_repeat 2 45 0 8 1346 402 240 29 29 chr13 99867506 99867609 -20416703 - PB1D10 SINE Alu -12 105 3 8 1346 2319 126 30 22 chr13 99867918 99868282 -20416030 + ORR1B2 LTR MaLR 1 367 0 8 1346 552 84 0 0 chr13 99869817 99869900 -20414412 + (CA)n Simple_repeat Simple_repeat 2 84 0 8 1346 287 270 27 0 chr13 99870907 99870981 -20413331 + ID4_ SINE ID 4 79 -4 8 1346 221 313 28 84 chr13 99871525 99871668 -20412644 + L2c LINE L2 3019 3153 -234 8 1346 324 0 0 0 chr13 99871876 99871912 -20412400 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 8 1346 988 137 0 0 chr13 99871912 99872051 -20412261 - B1_Mur3 SINE Alu -10 139 1 8 1346 290 342 0 18 chr13 99872882 99872907 -20411405 + (GGGTG)n Simple_repeat Simple_repeat 4 28 0 8 1346 3438 25 10 0 chr13 99872907 99873299 -20411013 + MTA_Mm LTR MaLR 1 396 0 8 1346 290 342 0 18 chr13 99873299 99873386 -20410926 + (GGGTG)n Simple_repeat Simple_repeat 3 88 0 8 1346 246 304 124 67 chr13 99873640 99873834 -20410478 + L1MB7 LINE L1 5838 6042 -142 8 1346 36 23 0 0 chr13 99873923 99873966 -20410346 + AT_rich Low_complexity Low_complexity 1 43 0 8 1346 747 244 77 22 chr13 99874193 99874415 -20409897 - MER63D DNA AcHobo -23 1038 805 8 1346 989 282 82 94 chr13 99874676 99875086 -20409226 - MER63D DNA AcHobo -563 498 93 8 1346 1388 35 82 0 chr13 99875086 99875257 -20409055 - B2_Mm1a SINE B2 -7 186 2 8 1346 989 282 82 94 chr13 99875257 99875347 -20408965 - MER63D DNA AcHobo -969 92 4 8 1347 1777 259 52 11 chr13 99877076 99877552 -20406760 + RMER5 LTR ERV1 30 525 -9 8 1347 608 242 32 25 chr13 99877569 99877726 -20406586 - Tigger7 DNA MER2_type -45 2446 2289 8 1347 292 192 0 0 chr13 99877742 99877794 -20406518 - Tigger7 DNA MER2_type -2141 350 299 8 1347 256 306 14 0 chr13 99878038 99878110 -20406202 - Tigger7 DNA MER2_type -2377 114 42 8 1347 709 169 80 14 chr13 99878420 99878558 -20405754 + B1_Mus1 SINE Alu 2 148 0 8 1347 232 351 51 42 chr13 99880763 99880792 -20403520 - LTR16E1 LTR ERVL -13 525 501 8 1347 1009 244 34 110 chr13 99880792 99881201 -20403111 + MTE2a LTR MaLR 1 378 -1 8 1347 232 351 51 42 chr13 99881201 99881388 -20402924 - LTR16E1 LTR ERVL -38 500 308 8 1347 884 256 6 0 chr13 99881614 99881786 -20402526 + B3 SINE B2 43 215 -1 8 1347 234 324 106 20 chr13 99882390 99882541 -20401771 + MIRb SINE MIR 26 189 -79 8 1347 410 64 51 13 chr13 99883330 99883409 -20400903 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 8 1347 221 138 61 15 chr13 99883457 99883523 -20400789 + (TA)n Simple_repeat Simple_repeat 2 70 0 8 1347 189 364 75 46 chr13 99884017 99884190 -20400122 + L2 LINE L2 2349 2526 -893 8 1347 1106 69 14 0 chr13 99884195 99884339 -20399973 + B1_Mus2 SINE Alu 2 147 0 8 1347 180 0 0 0 chr13 99884339 99884359 -20399953 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1347 372 43 0 0 chr13 99884775 99884821 -20399491 + (TG)n Simple_repeat Simple_repeat 1 46 0 8 1347 245 141 156 0 chr13 99884829 99884893 -20399419 + Lx8 LINE L1 7397 7470 -3 8 1347 1554 191 36 0 chr13 99886009 99886312 -20398000 + ORR1C1 LTR MaLR 62 375 -3 8 1347 517 264 105 35 chr13 99886387 99886587 -20397725 + B3 SINE B2 3 216 0 8 1347 201 243 0 0 chr13 99886630 99886700 -20397612 + (CA)n Simple_repeat Simple_repeat 2 71 0 8 1347 3603 35 28 7 chr13 99886812 99887239 -20397073 - RLTR10C LTR ERVK 0 436 1 8 1347 396 123 171 18 chr13 99887659 99887759 -20396553 - B2_Mm2 SINE B2 -15 180 47 8 1347 913 68 240 0 chr13 99887771 99887917 -20396395 - B2_Mm2 SINE B2 -14 181 1 8 1347 485 286 81 64 chr13 99888017 99888368 -20395944 + MTEa LTR MaLR 7 375 -4 8 1347 220 295 0 0 chr13 99888525 99888586 -20395726 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1347 1813 184 33 19 chr13 99889527 99889892 -20394420 - ORR1D1 LTR MaLR 0 374 5 8 1347 3588 60 19 127 chr13 99890403 99890977 -20393335 + RLTR1B LTR ERV1 1 512 0 8 1347 398 294 25 16 chr13 99891700 99891821 -20392491 - MLT1F LTR MaLR 0 548 427 8 1347 670 238 0 0 chr13 99891837 99891963 -20392349 + RSINE1 SINE B4 2 127 -38 8 1347 303 314 134 35 chr13 99892002 99892233 -20392079 - MLT1F-int LTR MaLR -1234 255 2 8 1347 772 286 187 50 chr13 99892234 99892716 -20391596 - MLT1F LTR MaLR 0 548 1 8 1347 3580 18 2 0 chr13 99892753 99893148 -20391164 - MTA_Mm LTR MaLR 0 396 1 8 1347 1417 256 72 33 chr13 99893335 99893792 -20390520 - Lx8 LINE L1 0 7473 6999 8 1347 1080 204 35 21 chr13 99893798 99894084 -20390228 + RMER10A LTR ERVL 9 298 -144 8 1347 415 263 98 23 chr13 99894107 99894321 -20389991 + RMER10B LTR ERVL 165 394 -4 8 1347 433 224 42 63 chr13 99894324 99894467 -20389845 - Lx8 LINE L1 -468 7005 6866 8 1347 1075 236 22 26 chr13 99895347 99895578 -20388734 + B4 SINE B4 1 230 -62 8 1347 698 269 73 28 chr13 99895582 99895794 -20388518 + B3 SINE B2 8 209 -7 8 1347 815 157 63 14 chr13 99895803 99895945 -20388367 + B1_Mur4 SINE Alu 1 149 -1 8 1347 885 123 89 35 chr13 99896061 99896230 -20388082 + B2_Mm2 SINE B2 1 178 -17 8 1347 310 283 121 22 chr13 99896392 99896545 -20387767 + MIR3 SINE MIR 5 169 -93 8 1347 3264 54 69 18 chr13 99897162 99897614 -20386698 - IAPLTR2_Mm LTR ERVK 0 475 1 8 1347 1353 197 245 34 chr13 99898027 99898464 -20385848 + RLTR24 LTR ERV1 1 529 0 8 1347 242 51 0 49 chr13 99898791 99898832 -20385480 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 8 1347 6335 89 37 31 chr13 99899186 99900160 -20384152 + Lx3A LINE L1 5998 6977 -4 8 1347 801 0 0 0 chr13 99900161 99900250 -20384062 + (GAA)n Simple_repeat Simple_repeat 1 89 0 8 1347 390 256 140 51 chr13 99900250 99900542 -20383770 + L2 LINE L2 2285 2602 -817 8 1347 503 177 43 0 chr13 99900554 99900718 -20383594 + (CA)n Simple_repeat Simple_repeat 2 172 0 8 1347 2216 87 38 58 chr13 99900784 99901126 -20383186 - IAPLTR1a_Mm LTR ERVK -2 335 1 8 1347 57978 18 9 4 chr13 99901126 99907567 -20376745 - IAPEz-int LTR ERVK 0 6481 6 8 1347 2161 85 38 59 chr13 99907567 99907906 -20376406 - IAPLTR1a_Mm LTR ERVK -5 332 1 8 1347 616 207 0 26 chr13 99907906 99908139 -20376173 + (CA)n Simple_repeat Simple_repeat 1 227 0 8 1347 688 262 190 34 chr13 99908305 99908615 -20375697 + MLT2C2 LTR ERVL 20 350 -64 8 1347 397 344 37 11 chr13 99908678 99908869 -20375443 + L2 LINE L2 2772 2967 -452 8 1347 940 279 12 4 chr13 99909057 99909298 -20375014 - MTEa LTR MaLR 0 379 137 8 1347 316 250 11 54 chr13 99909388 99909481 -20374831 - L2a LINE L2 -6 3420 3332 8 1347 1074 192 80 45 chr13 99909518 99910039 -20374273 - RMER17C LTR ERVK 0 410 2 9 1347 333 0 0 0 chr13 99910190 99910227 -20374085 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1347 180 0 0 0 chr13 99910231 99910251 -20374061 + (AGGGGG)n Simple_repeat Simple_repeat 4 23 0 9 1347 247 321 122 39 chr13 99910289 99910493 -20373819 - L2a LINE L2 -411 3008 2788 8 1347 234 0 0 0 chr13 99911957 99911983 -20372329 + (CAAAT)n Simple_repeat Simple_repeat 1 26 0 9 1347 1523 275 84 57 chr13 99912125 99912203 -20372109 + RMER1B Other Other 7 84 -982 9 1347 180 0 0 0 chr13 99912203 99912223 -20372089 + (GA)n Simple_repeat Simple_repeat 1 20 0 9 1347 1523 275 84 57 chr13 99912223 99912657 -20371655 + RMER1B Other Other 85 532 -534 9 1347 4562 182 119 16 chr13 99912692 99913500 -20370812 + RMER1A Other Other 1 869 -161 9 1347 180 111 0 0 chr13 99913500 99913527 -20370785 + (CTTG)n Simple_repeat Simple_repeat 1 27 0 9 1347 4562 182 119 16 chr13 99913527 99913650 -20370662 + RMER1A Other Other 870 1027 -3 9 1347 339 85 0 0 chr13 99913661 99913708 -20370604 + (CATA)n Simple_repeat Simple_repeat 2 48 0 9 1347 195 42 0 0 chr13 99913979 99914003 -20370309 + (TG)n Simple_repeat Simple_repeat 2 25 0 9 1347 254 308 29 36 chr13 99914517 99914655 -20369657 + (CATA)n Simple_repeat Simple_repeat 3 139 0 9 1347 1113 157 93 0 chr13 99915484 99915688 -20368624 + URR1A DNA MER1_type 1 223 -3 9 1347 219 36 0 0 chr13 99916002 99916030 -20368282 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 9 1347 465 92 0 0 chr13 99917095 99917171 -20367141 + (GA)n Simple_repeat Simple_repeat 1 76 0 9 1347 406 295 0 51 chr13 99917200 99917318 -20366994 - PB1D7 SINE Alu -8 112 1 9 1347 261 250 0 0 chr13 99917395 99917471 -20366841 + GA-rich Low_complexity Low_complexity 4 79 0 9 1347 306 0 0 0 chr13 99921634 99921668 -20362644 + (TG)n Simple_repeat Simple_repeat 1 34 0 9 1347 492 100 0 0 chr13 99921668 99921748 -20362564 + (GA)n Simple_repeat Simple_repeat 2 81 0 9 1347 395 288 95 25 chr13 99921791 99921950 -20362362 - B3A SINE B2 -21 177 8 9 1347 208 186 23 0 chr13 99922286 99922329 -20361983 + MER5B DNA MER1_type 133 176 -2 9 1347 799 278 5 45 chr13 99922973 99923195 -20361117 - ID_B1 SINE B4 -1 223 11 9 1347 183 304 43 14 chr13 99923384 99923454 -20360858 + L4 LINE RTE 1365 1436 -593 9 1347 904 184 0 0 chr13 99924192 99924333 -20359979 - B1_Mur3 SINE Alu -7 142 2 9 1347 581 263 96 88 chr13 99924667 99925021 -20359291 - ORR1E LTR MaLR -2 357 1 9 1347 766 342 106 35 chr13 99925042 99925666 -20358646 - Tigger13a DNA MER2_type -103 668 1 9 1347 483 87 101 71 chr13 99926669 99926768 -20357544 + ORR1C1 LTR MaLR 34 135 -243 9 1347 1597 186 55 5 chr13 99926776 99927088 -20357224 + ORR1C2 LTR MaLR 41 384 0 9 1347 1659 228 64 11 chr13 99927400 99927773 -20356539 + MTD LTR MaLR 7 399 -20 9 1347 828 163 20 13 chr13 99928292 99928441 -20355871 - URR1A DNA MER1_type 0 226 77 9 1347 467 258 226 63 chr13 99929889 99930204 -20354108 - RLTR41 LTR ERV1 -43 489 152 9 1347 492 178 0 0 chr13 99930586 99930693 -20353619 + (TCCA)n Simple_repeat Simple_repeat 3 109 0 9 1347 1176 91 0 0 chr13 99930709 99930885 -20353427 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 9 1347 213 264 0 0 chr13 99930893 99930965 -20353347 + (CCTA)n Simple_repeat Simple_repeat 3 74 0 9 1347 288 291 87 39 chr13 99930994 99931201 -20353111 + Charlie2a DNA MER1_type 1442 1658 -1203 9 1347 281 261 95 0 chr13 99931339 99931454 -20352858 + L1ME3 LINE L1 5821 5947 -226 9 1347 431 256 227 18 chr13 99931623 99931762 -20352550 + B3A SINE B2 1 174 -24 9 1347 306 0 0 0 chr13 99931762 99931796 -20352516 + (CA)n Simple_repeat Simple_repeat 2 35 0 9 1347 431 256 227 18 chr13 99931796 99931819 -20352493 + B3A SINE B2 175 197 -1 9 1347 289 259 17 100 chr13 99933117 99933137 -20351175 + MT2B2 LTR ERVL 145 154 -430 9 1347 390 252 43 70 chr13 99933137 99933252 -20351060 + PB1D10 SINE Alu 2 113 -4 9 1347 1031 113 21 0 chr13 99934996 99935138 -20349174 - B1_Mus1 SINE Alu -2 146 2 9 1347 227 273 102 54 chr13 99935276 99935423 -20348889 - LTR48 LTR ERV1 -588 199 46 9 1347 203 323 35 69 chr13 99935851 99936024 -20348288 + L2a LINE L2 2975 3141 -285 9 1347 481 291 146 35 chr13 99936234 99936665 -20347647 - L1MEb LINE L1 -5286 784 306 9 1347 540 241 100 4 chr13 99936697 99936916 -20347396 + Lx8 LINE L1 5076 5309 -538 9 1347 342 115 0 0 chr13 99936959 99937011 -20347301 + (GAA)n Simple_repeat Simple_repeat 3 54 0 9 1347 3156 297 113 56 chr13 99937257 99938984 -20345328 + Lx8 LINE L1 5587 7388 -85 9 1347 1073 279 10 52 chr13 99939109 99939400 -20344912 - MTEa LTR MaLR -96 283 5 9 1347 347 298 155 10 chr13 99939798 99939991 -20344321 + Charlie5 DNA MER1_type 2404 2624 0 9 1347 241 57 0 54 chr13 99940704 99940741 -20343571 - L1M5 LINE L1 -3976 2170 2136 9 1347 297 167 0 0 chr13 99940806 99940884 -20343428 + CT-rich Low_complexity Low_complexity 1 78 0 9 1347 263 255 134 18 chr13 99941294 99941338 -20342974 - L1MEg LINE L1 -4711 1373 1325 9 1347 486 0 0 0 chr13 99941338 99941392 -20342920 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 9 1347 1072 75 0 0 chr13 99941392 99941525 -20342787 - B1_Mus1 SINE Alu -12 136 4 9 1347 263 255 134 18 chr13 99941525 99941591 -20342721 - L1MEg LINE L1 -4760 1324 1250 9 1347 338 293 135 61 chr13 99941695 99941924 -20342388 - L1MEg LINE L1 -5346 738 493 9 1347 222 118 0 0 chr13 99942310 99942344 -20341968 + (T)n Simple_repeat Simple_repeat 1 34 0 9 1347 727 256 57 78 chr13 99942537 99942855 -20341457 - ORR1E LTR MaLR -16 363 24 9 1347 970 234 9 9 chr13 99942979 99943190 -20341122 + B3 SINE B2 1 211 -5 9 1347 394 290 20 10 chr13 99943563 99943664 -20340648 + PB1D10 SINE Alu 11 112 -5 9 1347 485 124 83 0 chr13 99943677 99943822 -20340490 + GA-rich Low_complexity Low_complexity 1 157 0 9 1347 245 225 0 11 chr13 99944384 99944474 -20339838 + (CA)n Simple_repeat Simple_repeat 2 90 0 9 1347 324 284 15 15 chr13 99944486 99944622 -20339690 + (CA)n Simple_repeat Simple_repeat 1 136 0 9 1347 326 95 0 0 chr13 99944637 99944679 -20339633 + HAL1-3A_ME LINE L1 1977 2018 -840 9 1347 1590 57 0 0 chr13 99945856 99946048 -20338264 + B2_Mm1t SINE B2 2 193 0 9 1347 240 238 48 0 chr13 99946505 99946568 -20337744 - MLT1F1 LTR MaLR 0 579 514 9 1347 335 269 74 37 chr13 99946590 99946725 -20337587 + MLT1A1 LTR MaLR 1 140 -268 9 1347 558 296 226 26 chr13 99946947 99947358 -20336954 - MLT1F1 LTR MaLR -58 490 4 9 1347 1002 226 24 24 chr13 99947446 99947659 -20336653 - B3 SINE B2 0 216 4 9 1347 270 0 0 0 chr13 99948423 99948453 -20335859 + (TG)n Simple_repeat Simple_repeat 1 30 0 9 1347 444 118 0 0 chr13 99948677 99948745 -20335567 + (TG)n Simple_repeat Simple_repeat 2 69 0 9 1347 684 185 14 65 chr13 99948844 99948983 -20335329 - B1_Mur3 SINE Alu -17 132 1 9 1347 236 53 26 0 chr13 99949040 99949078 -20335234 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 9 1347 1102 99 0 12 chr13 99950069 99950125 -20334187 + (TTC)n Simple_repeat Simple_repeat 1 56 0 9 1347 1620 0 0 0 chr13 99950125 99950305 -20334007 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 9 1347 1102 99 0 12 chr13 99950305 99950421 -20333891 + (TTC)n Simple_repeat Simple_repeat 3 117 0 9 1347 419 0 20 0 chr13 99951234 99951285 -20333027 + (CCAA)n Simple_repeat Simple_repeat 1 52 0 9 1347 306 316 0 32 chr13 99951384 99951541 -20332771 + L1ME3A LINE L1 5728 5879 -294 9 1347 216 135 0 0 chr13 99954726 99954763 -20329549 + (GA)n Simple_repeat Simple_repeat 2 38 0 9 1347 309 26 0 0 chr13 99957850 99957888 -20326424 + (TC)n Simple_repeat Simple_repeat 1 38 0 9 1347 309 308 78 85 chr13 99958162 99958432 -20325880 + MIR3 SINE MIR 4 276 0 9 1347 298 306 12 12 chr13 99959556 99959642 -20324670 + MER5A1 DNA MER1_type 13 98 -68 9 1347 282 212 20 10 chr13 99960230 99960330 -20323982 + GA-rich Low_complexity Low_complexity 2 102 0 9 1347 499 286 86 26 chr13 99962046 99962197 -20322115 + B3A SINE B2 1 160 -38 9 1347 405 0 0 0 chr13 99962209 99962254 -20322058 + (CA)n Simple_repeat Simple_repeat 1 45 0 9 1347 695 245 22 0 chr13 99962263 99962402 -20321910 + B1_Mur1 SINE Alu 1 142 -7 9 1347 476 262 140 84 chr13 99962869 99962909 -20321403 + L1ME1 LINE L1 5058 5099 -1047 9 1347 270 0 0 0 chr13 99962909 99962939 -20321373 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 1347 476 262 140 84 chr13 99962939 99963104 -20321208 + L1ME1 LINE L1 5100 5281 -865 9 1347 915 148 0 7 chr13 99963104 99963247 -20321065 + B1_Mur4 SINE Alu 1 142 -8 9 1347 279 0 0 0 chr13 99963248 99963279 -20321033 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 9 1347 476 262 140 84 chr13 99963279 99963378 -20320934 + L1ME1 LINE L1 5282 5381 -765 9 1347 528 305 82 71 chr13 99963631 99964069 -20320243 + L1ME1 LINE L1 5727 6169 -10 9 1347 216 307 40 0 chr13 99964329 99964404 -20319908 + MIR3 SINE MIR 128 205 -3 9 1347 303 266 26 60 chr13 99965710 99965826 -20318486 - MIRc SINE MIR -72 196 85 9 1347 232 332 22 26 chr13 99966198 99966308 -20318004 + MIR SINE MIR 62 181 -95 9 1347 1213 41 0 13 chr13 99966654 99966803 -20317509 + B1_Mus1 SINE Alu 2 148 0 9 1347 270 316 161 34 chr13 99968107 99968225 -20316087 - MIRc SINE MIR -115 153 21 9 1347 225 0 0 0 chr13 99969096 99969121 -20315191 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 9 1347 514 369 66 63 chr13 99969839 99970186 -20314126 - MLT1I LTR MaLR 0 411 64 9 1347 594 161 0 0 chr13 99971251 99971363 -20312949 + GA-rich Low_complexity Low_complexity 3 114 0 9 1347 1157 83 18 0 chr13 99971365 99971534 -20312778 + (GGAGAA)n Simple_repeat Simple_repeat 6 177 0 9 1347 256 88 0 0 chr13 99972482 99972516 -20311796 + RLTR22_Mur LTR ERVK 1 34 -1814 9 1347 185 263 0 0 chr13 99972520 99972558 -20311754 - L2a LINE L2 -91 3335 3298 9 1347 1047 246 37 79 chr13 99972953 99973386 -20310926 - RLTR11B LTR ERVK -14 427 1 9 1347 451 234 143 9 chr13 99973605 99973717 -20310595 - B1F SINE Alu 0 149 23 9 1347 423 0 0 0 chr13 99973941 99973988 -20310324 + (TG)n Simple_repeat Simple_repeat 2 48 0 9 1347 539 292 57 45 chr13 99974227 99974471 -20309841 - MER33 DNA MER1_type -76 248 2 9 1347 991 198 44 5 chr13 99974683 99974886 -20309426 - URR1A DNA MER1_type -15 211 1 9 1347 214 29 28 28 chr13 99975126 99975162 -20309150 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 9 1347 544 330 109 67 chr13 99975212 99975455 -20308857 + MER2 DNA MER2_type 1 273 -72 1 1347 754 196 0 0 chr13 99975455 99975593 -20308719 - B1_Mur1 SINE Alu -7 142 5 1 1347 544 330 109 67 chr13 99975593 99975680 -20308632 + MER2 DNA MER2_type 274 345 0 1 1347 1349 94 119 0 chr13 99977766 99977968 -20306344 - URR1A DNA MER1_type 0 226 1 1 1347 301 344 93 8 chr13 99978343 99978472 -20305840 + L1M5 LINE L1 5566 5705 -419 1 1347 185 151 19 0 chr13 99978835 99978888 -20305424 + T-rich Low_complexity Low_complexity 2 55 0 1 1347 820 144 29 0 chr13 99979237 99979410 -20304902 + CT-rich Low_complexity Low_complexity 3 180 0 1 1347 510 61 0 0 chr13 99979406 99979472 -20304840 + (TC)n Simple_repeat Simple_repeat 2 67 0 1 1347 262 136 0 0 chr13 99979472 99979516 -20304796 - PB1D7 SINE Alu -35 85 42 1 1347 306 67 0 0 chr13 99980192 99980237 -20304075 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1347 742 282 9 26 chr13 99982117 99982343 -20301969 + MER58A DNA MER1_type 2 223 -1 1 1347 313 293 138 0 chr13 99982433 99982549 -20301763 + B1F SINE Alu 2 133 -16 1 1347 627 14 0 0 chr13 99982549 99982621 -20301691 + (GA)n Simple_repeat Simple_repeat 1 72 0 1 1347 1045 123 6 6 chr13 99982621 99982801 -20301511 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1 1347 246 344 18 67 chr13 99983990 99984155 -20300157 - MER5B DNA MER1_type 0 178 22 1 1347 333 0 0 0 chr13 99984283 99984320 -20299992 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1347 441 0 0 0 chr13 99984320 99984368 -20299944 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1347 1222 68 9 5 chr13 99984816 99985039 -20299273 + (TTTC)n Simple_repeat Simple_repeat 1 223 0 1 1347 336 200 0 0 chr13 99985289 99985379 -20298933 + (TG)n Simple_repeat Simple_repeat 2 91 0 1 1347 255 125 0 0 chr13 99985444 99985484 -20298828 + (A)n Simple_repeat Simple_repeat 1 40 0 1 1347 745 206 199 6 chr13 99985743 99985919 -20298393 - B3 SINE B2 -6 210 1 1 1347 230 0 33 0 chr13 99985985 99986015 -20298297 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1347 189 0 0 0 chr13 99986459 99986480 -20297832 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 1347 1059 89 0 0 chr13 99986742 99986957 -20297355 + (TTC)n Simple_repeat Simple_repeat 1 215 0 1 1347 1203 49 0 0 chr13 99986960 99987102 -20297210 - B1_Mm SINE Alu -5 142 1 1 1347 322 237 13 26 chr13 99987243 99987321 -20296991 - MLT1J LTR MaLR -205 307 231 1 1347 549 0 0 0 chr13 99988259 99988320 -20295992 + (TTC)n Simple_repeat Simple_repeat 1 61 0 1 1347 232 258 66 85 chr13 99988624 99988730 -20295582 + MLT1E1A LTR MaLR 298 401 -279 1 1347 213 180 0 0 chr13 99990292 99990342 -20293970 + GA-rich Low_complexity Low_complexity 1 50 0 1 1347 408 20 0 0 chr13 99990850 99990899 -20293413 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1347 452 122 71 31 chr13 99991191 99991318 -20292994 - Lx9 LINE L1 0 7644 7513 1 1347 247 85 43 0 chr13 99991342 99991389 -20292923 + (TA)n Simple_repeat Simple_repeat 1 49 0 1 1347 315 0 0 0 chr13 99991524 99991559 -20292753 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1347 403 265 113 26 chr13 99992105 99992256 -20292056 + RSINE1 SINE B4 2 165 0 1 1347 877 195 0 7 chr13 99992410 99992560 -20291752 - B1_Mur3 SINE Alu 0 149 1 1 1347 1019 164 8 93 chr13 99992566 99992802 -20291510 - B3 SINE B2 0 216 1 1 1347 223 311 33 11 chr13 99994505 99994596 -20289716 - L2a LINE L2 -1 3425 3333 1 1347 1059 147 131 39 chr13 99994645 99994851 -20289461 - URR1B DNA MER1_type 0 225 1 1 1347 223 307 139 17 chr13 99995307 99995488 -20288824 - MIRb SINE MIR -41 221 20 1 1347 187 264 55 36 chr13 99997644 99997699 -20286613 + L2 LINE L2 2822 2877 -542 1 1347 240 270 73 73 chr13 99997859 99997983 -20286329 + MIR SINE MIR 25 148 -60 1 1347 317 250 29 77 chr13 100001120 100001224 -20283088 - L1MEe LINE L1 -4021 833 735 1 1347 753 261 108 11 chr13 100001245 100001505 -20282807 - B4A SINE B4 -7 285 1 2 1347 816 157 63 14 chr13 100001534 100001676 -20282636 - B1_Mur4 SINE Alu 0 150 2 3 1347 219 186 254 0 chr13 100002020 100002079 -20282233 - ID4_ SINE ID -9 74 1 4 1347 713 261 68 0 chr13 100002337 100002544 -20281768 - ID_B1 SINE B4 -3 221 1 5 1347 591 252 0 0 chr13 100002878 100002997 -20281315 + PB1 SINE Alu 2 120 -7 6 1347 898 204 12 0 chr13 100003007 100003169 -20281143 + B3 SINE B2 2 165 -51 7 1347 363 105 0 0 chr13 100003169 100003226 -20281086 + (CA)n Simple_repeat Simple_repeat 2 58 0 8 1347 235 273 0 111 chr13 100004691 100004790 -20279522 - L1MA5 LINE L1 -604 5696 5609 9 1347 1695 242 77 21 chr13 100004788 100005350 -20278962 + L1MA5 LINE L1 5702 6294 -6 9 1348 237 65 0 0 chr13 100008914 100008945 -20275367 + (TCCC)n Simple_repeat Simple_repeat 3 33 0 1 1348 461 228 0 0 chr13 100010519 100010611 -20273701 - B1_Mus2 SINE Alu 0 147 56 1 1348 1562 149 255 6 chr13 100010754 100011091 -20273221 - MTC LTR MaLR 0 421 1 1 1348 369 0 0 0 chr13 100011432 100011473 -20272839 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1348 674 291 117 23 chr13 100011476 100011733 -20272579 - B4 SINE B4 -7 285 5 1 1348 389 164 0 0 chr13 100013533 100013594 -20270718 + ID_B1 SINE B4 164 224 0 1 1348 253 330 91 59 chr13 100014292 100014479 -20269833 - MIRb SINE MIR -64 204 12 1 1348 204 40 0 0 chr13 100014813 100014838 -20269474 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 1 1348 291 114 0 0 chr13 100015520 100015564 -20268748 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1348 234 331 7 83 chr13 100017422 100017471 -20266841 - MER5B DNA MER1_type -16 162 116 1 1348 500 261 0 17 chr13 100017471 100017588 -20266724 + PB1D7 SINE Alu 1 115 -5 2 1348 234 331 7 83 chr13 100017588 100017683 -20266629 - MER5B DNA MER1_type -63 115 29 1 1348 258 115 49 0 chr13 100017864 100017925 -20266387 + (CA)n Simple_repeat Simple_repeat 1 64 0 2 1348 524 152 36 6 chr13 100017945 100018111 -20266201 + (CA)n Simple_repeat Simple_repeat 1 171 0 2 1348 354 148 43 9 chr13 100018161 100018277 -20266035 + (CA)n Simple_repeat Simple_repeat 1 120 0 2 1348 363 44 0 0 chr13 100018279 100018324 -20265988 + (TC)n Simple_repeat Simple_repeat 1 45 0 2 1348 360 43 0 0 chr13 100018324 100018369 -20265943 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1348 236 329 14 0 chr13 100019527 100019597 -20264715 + MER94 DNA AcHobo 33 103 -31 2 1348 24 0 0 0 chr13 100020580 100020604 -20263708 + AT_rich Low_complexity Low_complexity 1 24 0 2 1348 258 348 155 67 chr13 100020707 100021108 -20263204 - LTR16A LTR ERVL 0 451 16 2 1348 785 258 131 4 chr13 100022001 100022246 -20262066 - ORR1C2-int LTR MaLR -1304 276 1 2 1348 2243 141 37 16 chr13 100022261 100022635 -20261677 - ORR1C2 LTR MaLR -2 382 1 2 1348 277 211 72 11 chr13 100022636 100022730 -20261582 - MTE2a LTR MaLR -45 334 239 2 1348 290 337 89 6 chr13 100022737 100022916 -20261396 - L2b LINE L2 -229 3146 2953 2 1348 273 341 22 11 chr13 100023087 100023107 -20261205 + ID_B1 SINE B4 79 171 -53 3 1348 346 222 56 0 chr13 100023107 100023179 -20261133 + B1F SINE Alu 18 93 -56 3 1348 531 0 0 0 chr13 100023193 100023252 -20261060 + (TC)n Simple_repeat Simple_repeat 2 60 0 3 1348 756 242 121 117 chr13 100023302 100023438 -20260874 + B4 SINE B4 2 132 -160 3 1348 225 0 0 0 chr13 100023438 100023463 -20260849 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 3 1348 756 242 121 117 chr13 100023463 100023616 -20260696 + B4 SINE B4 133 291 -1 3 1348 25 0 0 0 chr13 100024137 100024162 -20260150 + AT_rich Low_complexity Low_complexity 1 25 0 3 1348 555 135 0 0 chr13 100024478 100024574 -20259738 + (TC)n Simple_repeat Simple_repeat 1 96 0 3 1348 428 158 37 15 chr13 100024606 100024741 -20259571 + (CA)n Simple_repeat Simple_repeat 1 138 0 3 1348 864 207 68 19 chr13 100026425 100026632 -20257680 - ID_B1 SINE B4 -7 217 1 3 1348 332 336 55 46 chr13 100026664 100026882 -20257430 + L1M4b LINE L1 13 232 -7102 3 1348 386 256 8 46 chr13 100027234 100027365 -20256947 - L1MB4 LINE L1 -43 6137 6012 4 1348 362 214 5 48 chr13 100027381 100027568 -20256744 + GA-rich Low_complexity Low_complexity 2 180 0 4 1348 491 353 98 39 chr13 100027645 100027950 -20256362 - MT2A LTR ERVL -68 465 1 4 1348 536 231 104 0 chr13 100027950 100028084 -20256228 - MTEa LTR MaLR -231 148 1 4 1348 830 303 33 10 chr13 100028084 100028391 -20255921 - ERVL-int LTR ERVL 0 5757 5444 4 1348 485 250 0 0 chr13 100028395 100028491 -20255821 + MTEa LTR MaLR 284 379 0 4 1348 1419 216 72 3 chr13 100028604 100028911 -20255401 - MERVL_2A-int LTR ERVL -2189 3572 3245 4 1348 244 178 0 0 chr13 100028963 100029008 -20255304 - MTEa LTR MaLR -334 45 1 4 1348 1110 68 0 0 chr13 100029056 100029204 -20255108 + (TTCTC)n Simple_repeat Simple_repeat 3 150 0 4 1348 453 278 52 21 chr13 100029232 100029423 -20254889 - L1MB4 LINE L1 -250 5930 5734 4 1348 429 238 105 0 chr13 100029965 100030070 -20254242 + Charlie9 DNA MER1_type 1 116 -2641 4 1348 246 429 21 41 chr13 100031045 100031288 -20253024 + ORR1E LTR MaLR 12 249 -110 4 1348 2284 144 48 13 chr13 100031436 100031815 -20252497 - MTC LTR MaLR 0 421 30 5 1348 2574 106 28 177 chr13 100032211 100032714 -20251598 - RLTR23 LTR ERV1 -2 428 1 5 1348 726 246 37 42 chr13 100032748 100032939 -20251373 - B3A SINE B2 -6 192 3 5 1348 498 282 51 28 chr13 100033045 100033260 -20251052 + L3 LINE CR1 2088 2307 -2182 5 1348 384 22 0 0 chr13 100033859 100033904 -20250408 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1348 312 351 91 49 chr13 100034134 100034377 -20249935 + L3 LINE CR1 2824 3076 -1413 5 1348 215 377 121 18 chr13 100034528 100034801 -20249511 + L3 LINE CR1 3375 3675 -814 5 1348 30 45 0 0 chr13 100035000 100035044 -20249268 + AT_rich Low_complexity Low_complexity 1 44 0 5 1348 393 193 12 24 chr13 100035227 100035309 -20249003 + B4 SINE B4 15 95 -197 5 1348 328 336 93 0 chr13 100035309 100035416 -20248896 + RSINE1 SINE B4 4 120 -45 5 1348 448 290 21 48 chr13 100035383 100035528 -20248784 + B4A SINE B4 122 262 -30 5 1348 432 0 0 0 chr13 100035563 100035611 -20248701 + (TG)n Simple_repeat Simple_repeat 2 49 0 5 1348 659 261 0 7 chr13 100036174 100036317 -20247995 + B1_Mur2 SINE Alu 2 143 -6 5 1348 628 275 79 34 chr13 100036347 100036524 -20247788 + MER5A DNA MER1_type 4 188 -1 6 1348 2923 141 157 2 chr13 100036719 100037516 -20246796 + Lx5 LINE L1 816 1735 -4142 6 1348 5282 128 34 2 chr13 100037516 100038375 -20245937 + Lx5 LINE L1 2450 3335 -2542 6 1348 12052 135 27 20 chr13 100038371 100039081 -20245231 + Lx5 LINE L1 3809 4527 -1350 6 1348 1279 94 27 22 chr13 100039081 100039265 -20245047 + B2_Mm2 SINE B2 3 187 -8 6 1348 12052 135 27 20 chr13 100039265 100039572 -20244740 + Lx5 LINE L1 4528 4825 -1052 6 1348 432 0 0 0 chr13 100039572 100039620 -20244692 + (CAA)n Simple_repeat Simple_repeat 1 48 0 6 1348 12052 147 24 22 chr13 100039620 100041329 -20242983 + Lx5 LINE L1 4826 6550 -500 6 1348 3901 156 47 9 chr13 100041329 100041995 -20242317 - RLTR17 LTR ERVK 0 692 2 6 1348 8092 166 20 25 chr13 100041995 100042480 -20241832 + Lx5 LINE L1 6551 7030 -20 6 1348 531 0 0 0 chr13 100042480 100042539 -20241773 + (TAGA)n Simple_repeat Simple_repeat 1 59 0 6 1348 1818 193 8 68 chr13 100042543 100042910 -20241402 - ORR1D1 LTR MaLR -29 345 1 6 1348 1252 48 0 0 chr13 100043023 100043170 -20241142 + B1_Mus1 SINE Alu 2 148 0 6 1348 216 0 0 0 chr13 100043205 100043229 -20241083 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 1348 574 317 0 0 chr13 100044880 100045022 -20239290 - B4 SINE B4 -67 225 84 6 1348 627 14 0 0 chr13 100045184 100045256 -20239056 + (GA)n Simple_repeat Simple_repeat 1 72 0 7 1348 333 0 0 0 chr13 100045329 100045366 -20238946 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 7 1348 1158 61 0 33 chr13 100045370 100045523 -20238789 - B1_Mus1 SINE Alu 0 148 1 7 1348 490 329 50 0 chr13 100045525 100045686 -20238626 - MER2 DNA MER2_type -151 194 26 7 1348 796 211 169 17 chr13 100047173 100047409 -20236903 - ORR1D1 LTR MaLR 0 374 103 7 1348 330 26 0 0 chr13 100047464 100047503 -20236809 + (T)n Simple_repeat Simple_repeat 1 39 0 7 1348 828 285 48 42 chr13 100047503 100047792 -20236520 - MTE-int LTR MaLR -1289 291 1 7 1348 216 200 18 18 chr13 100047898 100047954 -20236358 + G-rich Low_complexity Low_complexity 4 59 0 7 1348 504 32 0 0 chr13 100048395 100048457 -20235855 + (TG)n Simple_repeat Simple_repeat 2 63 0 7 1348 709 196 14 27 chr13 100049472 100049619 -20234693 - ID_B1 SINE B4 -1 223 79 7 1348 271 273 179 15 chr13 100049619 100049753 -20234559 + MIRb SINE MIR 113 268 0 8 1348 1101 200 5 32 chr13 100049911 100050128 -20234184 + B3 SINE B2 1 211 -5 8 1348 327 298 259 12 chr13 100050986 100051156 -20233156 - HAL1-3A_ME LINE L1 -669 2189 1978 8 1348 420 20 0 0 chr13 100051429 100051478 -20232834 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 1348 445 335 48 18 chr13 100051544 100051711 -20232601 - MER5A DNA MER1_type -16 173 2 8 1348 1159 183 10 5 chr13 100051770 100051979 -20232333 + B3 SINE B2 1 210 -6 8 1348 223 286 112 125 chr13 100052033 100052193 -20232119 + MIRb SINE MIR 20 177 -91 8 1348 280 239 133 86 chr13 100052247 100052375 -20231937 + MLT1A1 LTR MaLR 1 134 -274 8 1348 213 121 0 0 chr13 100054978 100055011 -20229301 + (TG)n Simple_repeat Simple_repeat 1 33 0 8 1348 280 227 15 0 chr13 100055549 100055615 -20228697 + FLAM_A SINE Alu 10 76 -219 8 1348 278 133 50 0 chr13 100056811 100056871 -20227441 + (GTTTG)n Simple_repeat Simple_repeat 1 63 0 9 1348 967 262 47 29 chr13 100056934 100057213 -20227099 - B4A SINE B4 0 292 9 9 1348 315 0 0 0 chr13 100058230 100058265 -20226047 + (TC)n Simple_repeat Simple_repeat 2 36 0 9 1348 294 29 0 0 chr13 100058265 100058299 -20226013 + (TG)n Simple_repeat Simple_repeat 2 36 0 9 1348 461 250 35 18 chr13 100058379 100058493 -20225819 + PB1D7 SINE Alu 5 120 0 9 1348 279 0 0 0 chr13 100058493 100058524 -20225788 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 9 1348 1346 90 17 0 chr13 100058538 100058715 -20225597 + B2_Mm2 SINE B2 1 180 -15 9 1348 189 0 0 0 chr13 100058716 100058737 -20225575 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 9 1348 279 0 0 0 chr13 100058846 100058877 -20225435 + (CA)n Simple_repeat Simple_repeat 2 32 0 9 1348 389 188 12 0 chr13 100059025 100059110 -20225202 + (TA)n Simple_repeat Simple_repeat 2 87 0 9 1348 644 107 0 9 chr13 100059192 100059305 -20225007 + (CA)n Simple_repeat Simple_repeat 2 113 0 1 1348 686 210 28 14 chr13 100060030 100060175 -20224137 + B1_Mur3 SINE Alu 3 149 0 1 1348 1257 90 22 6 chr13 100060496 100060675 -20223637 - B2_Mm2 SINE B2 -11 184 3 1 1348 1214 270 11 73 chr13 100061156 100061530 -20222782 - ORR1E LTR MaLR -10 411 4 1 1348 246 330 129 9 chr13 100061530 100061625 -20222687 - ORR1E-int LTR MaLR -50 1530 1422 1 1348 243 0 0 0 chr13 100061625 100061652 -20222660 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1348 1715 282 131 99 chr13 100061655 100061786 -20222526 - ORR1E-int LTR MaLR -192 1178 1064 1 1348 2446 115 91 21 chr13 100061786 100062205 -20222107 + RLTR11B LTR ERVK 2 449 -4 1 1348 1715 282 131 99 chr13 100062205 100062966 -20221346 - ORR1E-int LTR MaLR -307 1063 266 1 1348 255 61 0 0 chr13 100062966 100062999 -20221313 + (TTG)n Simple_repeat Simple_repeat 3 35 0 1 1348 1715 282 131 99 chr13 100062999 100063036 -20221276 - ORR1E-int LTR MaLR -1105 265 220 1 1348 2225 126 97 21 chr13 100063043 100063425 -20220887 - MTC LTR MaLR 0 421 11 1 1348 241 206 175 0 chr13 100063425 100063488 -20220824 - ORR1E-int LTR MaLR -1346 234 161 1 1348 935 249 78 78 chr13 100063479 100063775 -20220537 - ORR1E LTR MaLR -60 299 4 1 1348 260 272 145 42 chr13 100064607 100064802 -20219510 + L1MB8 LINE L1 5101 5329 -817 1 1348 1038 39 0 0 chr13 100064804 100064932 -20219380 + B1_Mm SINE Alu 17 144 -3 1 1348 210 37 0 0 chr13 100064932 100064959 -20219353 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1 1348 1219 171 5 0 chr13 100065074 100065273 -20219039 - B3 SINE B2 -16 200 1 1 1348 378 273 86 8 chr13 100065286 100065445 -20218867 + L1MB8 LINE L1 5449 5623 -541 1 1348 338 254 158 59 chr13 100065540 100065762 -20218550 + L1MB8 LINE L1 5869 6112 -66 1 1348 661 204 58 14 chr13 100065769 100065908 -20218404 + B1_Mur2 SINE Alu 5 149 0 1 1348 757 272 6 11 chr13 100065921 100066103 -20218209 + B3A SINE B2 2 182 -16 1 1348 445 400 0 0 chr13 100066113 100066293 -20218019 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1348 303 152 21 52 chr13 100067011 100067108 -20217204 + A-rich Low_complexity Low_complexity 3 96 0 1 1348 193 248 194 43 chr13 100067898 100068037 -20216275 + L3 LINE CR1 1069 1228 -3261 1 1348 630 71 0 0 chr13 100068448 100068532 -20215780 + (TAGA)n Simple_repeat Simple_repeat 2 85 0 1 1348 490 204 421 0 chr13 100068738 100068890 -20215422 + B3 SINE B2 1 216 0 1 1348 198 0 0 0 chr13 100071567 100071589 -20212723 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 1 1348 251 304 12 25 chr13 100071638 100071719 -20212593 - MLT1A1 LTR MaLR -21 387 308 1 1348 2236 286 119 40 chr13 100072759 100073551 -20210761 - MER21B LTR ERV1 -9 854 1 1 1348 249 290 113 28 chr13 100073567 100073709 -20210603 - MLT1A1 LTR MaLR -362 310 157 1 1348 667 186 7 40 chr13 100074739 100074890 -20209422 - Lx4B LINE L1 -4 7054 6909 1 1348 2121 166 56 3 chr13 100074963 100075338 -20208974 - Lx4B LINE L1 -139 6919 6525 1 1348 915 143 0 7 chr13 100075519 100075660 -20208652 + B1_Mus2 SINE Alu 6 145 -2 1 1348 958 45 15 0 chr13 100075743 100075875 -20208437 + (TG)n Simple_repeat Simple_repeat 2 135 0 1 1348 824 261 56 28 chr13 100075880 100076164 -20208148 - B4 SINE B4 0 292 1 1 1348 614 63 21 0 chr13 100076996 100077091 -20207221 + (TCTCTG)n Simple_repeat Simple_repeat 4 100 0 1 1348 1061 53 0 0 chr13 100077093 100077225 -20207087 - B1_Mm SINE Alu -5 142 11 1 1348 972 287 197 7 chr13 100078937 100079393 -20204919 - MLT1F LTR MaLR -5 543 1 1 1348 514 287 24 16 chr13 100079494 100079640 -20204672 + ORR1E LTR MaLR 30 176 -194 1 1348 338 258 28 47 chr13 100079674 100079780 -20204532 + L1M4b LINE L1 2167 2270 -5064 1 1348 1243 27 7 0 chr13 100080385 100080531 -20203781 + B1_Mus1 SINE Alu 2 148 0 1 1348 204 125 0 0 chr13 100080532 100080564 -20203748 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 1 1348 398 316 17 11 chr13 100081707 100081883 -20202429 - L1ME2 LINE L1 -205 5959 5783 1 1348 528 339 73 0 chr13 100082193 100082370 -20201942 + MER20 DNA MER1_type 2 191 -28 1 1348 324 0 0 0 chr13 100082440 100082476 -20201836 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1 1348 483 210 49 10 chr13 100082617 100082771 -20201541 + ORR1E LTR MaLR 204 419 0 1 1348 334 208 258 23 chr13 100083577 100083705 -20200607 - RMER15 LTR ERVL -15 560 403 1 1348 180 111 0 0 chr13 100083914 100083941 -20200371 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1348 1117 50 0 0 chr13 100083941 100084080 -20200232 - B1_Mus2 SINE Alu 0 147 9 1 1348 786 171 5 81 chr13 100084080 100084126 -20200186 - ID_B1 SINE B4 0 224 54 1 1348 417 238 29 19 chr13 100085360 100085463 -20198849 + B1F SINE Alu 38 141 -8 1 1348 621 339 68 20 chr13 100085612 100085904 -20198408 - ORR1E LTR MaLR -9 350 45 1 1348 308 262 155 0 chr13 100086003 100086087 -20198225 + PB1D10 SINE Alu 2 98 -19 1 1348 441 0 0 0 chr13 100087143 100087192 -20197120 + (GA)n Simple_repeat Simple_repeat 2 50 0 1 1348 219 149 40 0 chr13 100087261 100087335 -20196977 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 1348 234 310 97 0 chr13 100087428 100087541 -20196771 + MIRb SINE MIR 117 240 -28 1 1348 1129 139 93 56 chr13 100087629 100087843 -20196469 - URR1A DNA MER1_type 0 226 5 1 1348 871 165 262 0 chr13 100087883 100088047 -20196265 + B3 SINE B2 1 207 -9 1 1348 239 193 45 27 chr13 100088851 100088963 -20195349 + (TA)n Simple_repeat Simple_repeat 1 114 0 1 1348 379 269 55 49 chr13 100091177 100091341 -20192971 - L2 LINE L2 -1857 1562 1398 1 1348 387 0 0 0 chr13 100091887 100091930 -20192382 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1348 303 300 0 11 chr13 100093260 100093351 -20190961 - Lx8 LINE L1 -219 7254 7165 1 1348 231 296 91 18 chr13 100094161 100094271 -20190041 + L3b LINE CR1 189 306 -176 1 1348 2784 52 0 0 chr13 100094503 100094830 -20189482 + ORR1A2 LTR MaLR 1 327 0 1 1348 439 242 143 38 chr13 100095132 100095265 -20189047 - B3A SINE B2 -42 156 10 1 1348 1152 120 0 3 chr13 100096111 100096402 -20187910 + (CA)n Simple_repeat Simple_repeat 1 290 0 1 1348 242 208 21 0 chr13 100096879 100096927 -20187385 + L1MC4 LINE L1 107 155 -6156 1 1348 337 246 160 76 chr13 100098585 100098823 -20185489 + L1MC4 LINE L1 2123 2380 -3835 1 1348 211 288 11 91 chr13 100099385 100099473 -20184839 + MIR3 SINE MIR 91 171 -37 1 1348 1394 161 153 13 chr13 100100156 100100470 -20183842 + Lx9 LINE L1 7265 7622 -22 1 1348 1297 87 27 0 chr13 100100470 100100654 -20183658 - B2_Mm2 SINE B2 -1 194 6 1 1348 1267 195 0 0 chr13 100101027 100101237 -20183075 + B3 SINE B2 1 210 -6 1 1348 859 268 30 0 chr13 100101908 100102106 -20182206 + B3 SINE B2 2 205 -11 1 1348 623 216 7 15 chr13 100102982 100103118 -20181194 - B1_Mur2 SINE Alu -3 146 12 1 1348 1211 36 0 0 chr13 100103434 100103574 -20180738 + B1_Mus2 SINE Alu 2 141 -6 1 1348 489 34 0 0 chr13 100103576 100103635 -20180677 + (GAAAA)n Simple_repeat Simple_repeat 2 60 0 1 1348 2076 201 84 34 chr13 100103933 100104479 -20179833 + RMER16 LTR ERVK 3 533 0 1 1348 21 0 0 0 chr13 100104885 100104906 -20179406 + AT_rich Low_complexity Low_complexity 1 21 0 1 1348 233 296 74 0 chr13 100105110 100105164 -20179148 - RSINE1 SINE B4 0 165 108 1 1348 660 270 106 64 chr13 100105202 100105467 -20178845 - B4 SINE B4 0 292 17 1 1348 277 253 98 37 chr13 100105634 100105716 -20178596 + B1F SINE Alu 35 121 -28 1 1348 596 253 19 45 chr13 100106005 100106162 -20178150 - RSINE1 SINE B4 0 165 13 1 1348 27 0 0 0 chr13 100106258 100106285 -20178027 + AT_rich Low_complexity Low_complexity 1 27 0 1 1348 537 272 123 18 chr13 100106812 100107040 -20177272 + B4A SINE B4 41 292 0 1 1348 489 17 0 0 chr13 100107061 100107119 -20177193 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1348 250 287 226 0 chr13 100107611 100107726 -20176586 + MIRb SINE MIR 58 198 -70 1 1348 281 292 52 10 chr13 100108591 100108688 -20175624 + MTEb LTR MaLR 279 379 0 1 1348 374 194 133 19 chr13 100108948 100109053 -20175259 + PB1D10 SINE Alu 1 117 0 1 1348 191 262 153 36 chr13 100110160 100110271 -20174041 + MER5A DNA MER1_type 65 188 -1 1 1348 200 200 0 68 chr13 100110546 100110605 -20173707 + A-rich Low_complexity Low_complexity 2 56 0 1 1348 219 333 13 0 chr13 100111111 100111189 -20173123 + MIRb SINE MIR 185 263 -5 1 1348 483 260 156 0 chr13 100111852 100112025 -20172287 + B3 SINE B2 1 200 -16 1 1348 760 286 0 45 chr13 100112487 100112685 -20171627 - B3A SINE B2 -2 196 8 1 1348 262 270 48 0 chr13 100112970 100113033 -20171279 - MER5A1 DNA MER1_type -100 66 1 1 1348 410 65 0 16 chr13 100113635 100113698 -20170614 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1348 226 251 153 60 chr13 100113951 100114098 -20170214 + MIR SINE MIR 24 179 -83 1 1348 495 307 57 10 chr13 100115949 100116143 -20168169 - MER3 DNA MER1_type -4 205 3 1 1348 237 328 153 28 chr13 100116416 100116592 -20167720 - MIRb SINE MIR -68 200 3 1 1348 240 276 141 10 chr13 100116743 100116842 -20167470 + MER5A1 DNA MER1_type 48 159 -7 1 1348 249 33 0 0 chr13 100117006 100117036 -20167276 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1348 301 302 0 0 chr13 100117059 100117122 -20167190 - B4A SINE B4 -4 288 226 1 1348 443 294 152 30 chr13 100117203 100117466 -20166846 - L1MB8 LINE L1 -27 6151 5857 1 1348 1552 58 21 0 chr13 100117467 100117656 -20166656 - B2_Mm2 SINE B2 -1 194 2 1 1348 1089 70 21 7 chr13 100117732 100117875 -20166437 + B1_Mus1 SINE Alu 2 146 -2 1 1348 659 56 0 167 chr13 100119191 100119407 -20164905 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1348 334 327 64 34 chr13 100119761 100120027 -20164285 - MER20B DNA MER1_type -301 482 209 1 1348 339 337 88 16 chr13 100120024 100120217 -20164095 - B4A SINE B4 -85 207 1 1 1348 180 0 0 0 chr13 100120304 100120324 -20163988 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 1348 280 267 23 0 chr13 100120420 100120506 -20163806 + GA-rich Low_complexity Low_complexity 1 88 0 1 1348 2455 93 12 0 chr13 100120765 100121088 -20163224 - ORR1A2 LTR MaLR 0 327 1 1 1348 357 309 148 59 chr13 100121268 100121753 -20162559 - L1MC4 LINE L1 -752 7290 6763 1 1348 3044 37 16 0 chr13 100122236 100122610 -20161702 + MTA_Mm LTR MaLR 17 396 0 2 1348 180 0 0 0 chr13 100123810 100123830 -20160482 + (TC)n Simple_repeat Simple_repeat 2 21 0 2 1348 529 184 24 73 chr13 100123925 100124048 -20160264 - PB1D9 SINE Alu 0 120 4 2 1348 344 279 164 6 chr13 100124216 100124375 -20159937 - L1MC5 LINE L1 -111 7850 7667 2 1348 1231 34 7 0 chr13 100124596 100124742 -20159570 - B1_Mm SINE Alu 0 147 1 2 1348 205 179 0 0 chr13 100124847 100124886 -20159426 + T-rich Low_complexity Low_complexity 4 42 0 2 1348 270 253 132 0 chr13 100124888 100124979 -20159333 + L1M3 LINE L1 4517 4619 -1521 2 1348 1247 117 37 0 chr13 100126505 100126693 -20157619 - B2_Mm2 SINE B2 0 195 1 2 1348 274 227 90 11 chr13 100126934 100127023 -20157289 + B4A SINE B4 5 100 -192 2 1348 303 210 111 0 chr13 100127113 100127194 -20157118 + B3A SINE B2 1 90 -108 2 1348 354 238 35 0 chr13 100127249 100127346 -20156966 + B4A SINE B4 84 183 -109 2 1348 282 29 0 0 chr13 100127412 100127447 -20156865 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1348 368 257 152 63 chr13 100127478 100127669 -20156643 - L1MEd LINE L1 -4952 1167 960 2 1348 297 367 9 0 chr13 100127680 100127789 -20156523 - PB1D10 SINE Alu -7 110 1 2 1348 362 318 100 61 chr13 100127825 100128056 -20156256 - L1ME1 LINE L1 -12 6167 5928 2 1348 396 0 0 0 chr13 100130169 100130213 -20154099 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1348 203 297 17 41 chr13 100130263 100130435 -20153877 + (TG)n Simple_repeat Simple_repeat 1 168 0 2 1348 290 284 19 31 chr13 100130461 100130621 -20153691 + (TG)n Simple_repeat Simple_repeat 1 158 0 2 1348 180 0 0 0 chr13 100130669 100130689 -20153623 + (TG)n Simple_repeat Simple_repeat 1 20 0 2 1348 213 39 0 0 chr13 100130807 100130833 -20153479 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1348 344 296 11 38 chr13 100130867 100131050 -20153262 + (TG)n Simple_repeat Simple_repeat 1 178 0 2 1348 758 222 126 5 chr13 100131056 100131255 -20153057 - B4 SINE B4 -69 223 1 2 1348 247 351 156 5 chr13 100131351 100131563 -20152749 - L2 LINE L2 -829 2590 2347 2 1348 196 336 114 8 chr13 100131804 100131936 -20152376 - L2 LINE L2 -1854 1565 1420 2 1348 1136 126 23 0 chr13 100131947 100132121 -20152191 + B2_Mm1t SINE B2 2 179 -14 2 1348 265 131 505 57 chr13 100132128 100132231 -20152081 + B2_Mm2 SINE B2 28 176 -19 2 1348 933 50 0 0 chr13 100132610 100132731 -20151581 - B1_Mus1 SINE Alu 0 148 28 2 1348 329 247 0 24 chr13 100134357 100134440 -20149872 - ID4_ SINE ID -2 81 1 2 1348 658 231 0 0 chr13 100134605 100134735 -20149577 + B3 SINE B2 1 130 -86 2 1348 309 68 0 0 chr13 100135347 100135391 -20148921 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1348 1023 75 0 0 chr13 100135728 100135862 -20148450 - B1_Mus2 SINE Alu 0 147 14 2 1348 373 233 160 82 chr13 100135763 100135969 -20148343 - MT2B LTR ERVL -337 264 43 2 1348 1053 141 18 12 chr13 100136123 100136288 -20148024 + URR1B DNA MER1_type 29 194 -31 2 1348 397 361 160 6 chr13 100137157 100137494 -20146818 + Charlie4a DNA MER1_type 7 395 -113 2 1349 560 37 0 129 chr13 100139554 100139647 -20144665 + B1_Mur4 SINE Alu 69 149 -1 2 1349 329 269 67 2 chr13 100140160 100140266 -20144046 - L1M4 LINE L1 -735 5709 5599 2 1349 1371 51 51 11 chr13 100140266 100140444 -20143868 - B2_Mm2 SINE B2 -9 186 2 2 1349 278 287 64 92 chr13 100140444 100140510 -20143802 - L1M4 LINE L1 -846 5598 5542 2 1349 641 320 122 81 chr13 100140659 100140892 -20143420 - L1M4 LINE L1 -911 5235 4995 2 1349 197 65 0 31 chr13 100140892 100140924 -20143388 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1349 641 320 122 81 chr13 100140924 100140985 -20143327 - L1M4 LINE L1 -1152 4994 4946 2 1349 531 45 0 0 chr13 100140985 100141051 -20143261 + (TCCC)n Simple_repeat Simple_repeat 2 67 0 2 1349 641 320 122 81 chr13 100141051 100141288 -20143024 - L1M4 LINE L1 -1201 4945 4681 2 1349 879 173 13 147 chr13 100141371 100141602 -20142710 - B3 SINE B2 -15 201 2 2 1349 687 191 35 7 chr13 100141633 100141775 -20142537 - B1_Mur1 SINE Alu -1 148 3 2 1349 1170 81 73 22 chr13 100142223 100142401 -20141911 + B2_Mm2 SINE B2 1 187 -8 2 1349 258 243 54 0 chr13 100146487 100146598 -20137714 + (TA)n Simple_repeat Simple_repeat 1 117 0 2 1349 187 277 71 24 chr13 100147922 100148007 -20136305 + L2c LINE L2 3297 3385 -2 2 1349 268 257 115 83 chr13 100148178 100148335 -20135977 + MIRc SINE MIR 9 170 -98 2 1349 453 288 48 0 chr13 100149008 100149133 -20135179 + B1_Mur2 SINE Alu 2 132 -17 2 1349 564 135 0 0 chr13 100149906 100150017 -20134295 + (ACTG)n Simple_repeat Simple_repeat 4 114 0 2 1349 812 236 163 66 chr13 100150185 100150534 -20133778 - MLT1B LTR MaLR 0 390 8 2 1349 289 246 9 0 chr13 100150715 100150795 -20133517 - L1MB4 LINE L1 -156 6018 5935 2 1349 483 260 95 46 chr13 100150839 100151101 -20133211 - L1MB4 LINE L1 -840 5306 5032 2 1349 713 245 50 37 chr13 100151693 100151854 -20132458 + RSINE1 SINE B4 3 165 0 2 1349 341 283 49 103 chr13 100151703 100151888 -20132424 + B2_Mm2 SINE B2 12 186 -9 2 1349 578 214 95 0 chr13 100153461 100153587 -20130725 + B1_Mm SINE Alu 1 138 -9 2 1349 234 0 0 0 chr13 100153591 100153617 -20130695 + (CAGA)n Simple_repeat Simple_repeat 1 26 0 2 1349 218 280 66 13 chr13 100154215 100154291 -20130021 + ID2 SINE ID 4 83 0 2 1349 298 209 318 23 chr13 100154615 100154747 -20129565 - Lx8 LINE L1 -146 7327 7157 2 1349 1104 70 14 0 chr13 100155759 100155902 -20128410 - B1_Mus2 SINE Alu -2 145 1 2 1349 339 25 0 0 chr13 100155904 100155944 -20128368 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 1349 384 254 42 0 chr13 100155945 100156063 -20128249 - PB1 SINE Alu -4 123 1 2 1349 204 261 28 42 chr13 100156680 100156752 -20127560 + CT-rich Low_complexity Low_complexity 4 74 0 2 1349 225 294 229 25 chr13 100157021 100157143 -20127169 + B1_Mur1 SINE Alu 2 148 -1 2 1349 246 292 34 109 chr13 100157635 100157754 -20126558 - MIR SINE MIR -37 225 116 2 1349 292 299 118 49 chr13 100157836 100157980 -20126332 + MLT1A1 LTR MaLR 1 154 -254 2 1349 878 236 62 24 chr13 100158246 100158454 -20125858 + B3 SINE B2 1 216 0 2 1349 723 249 67 5 chr13 100158488 100158682 -20125630 - MTE2b LTR MaLR -173 206 1 2 1349 232 319 39 111 chr13 100158923 100159208 -20125104 - RMER17B LTR ERVK -680 278 85 2 1349 288 300 115 45 chr13 100159896 100160053 -20124259 - MIRb SINE MIR -31 237 70 2 1349 1312 93 0 49 chr13 100160055 100160258 -20124054 - B2_Mm2 SINE B2 -1 194 2 2 1349 24 0 0 0 chr13 100160934 100160958 -20123354 + AT_rich Low_complexity Low_complexity 1 24 0 2 1349 738 87 0 0 chr13 100161154 100161257 -20123055 + (CTACT)n Simple_repeat Simple_repeat 2 104 0 2 1349 1215 101 0 6 chr13 100161885 100162054 -20122258 - B2_Mm2 SINE B2 -27 168 1 2 1349 655 284 25 40 chr13 100162499 100162697 -20121615 + B3A SINE B2 1 195 -3 2 1349 585 361 29 0 chr13 100163088 100163326 -20120986 + Lx8 LINE L1 6823 7067 -406 2 1349 1412 129 17 0 chr13 100163906 100164139 -20120173 - L1_Mur3 LINE L1 -1822 4058 3822 2 1349 1173 74 0 0 chr13 100164194 100164342 -20119970 + B1_Mus1 SINE Alu 1 148 0 2 1349 1328 86 30 52 chr13 100164359 100164628 -20119684 - L1_Mur3 LINE L1 -2575 3305 3043 2 1349 507 33 0 0 chr13 100165231 100165292 -20119020 + (GA)n Simple_repeat Simple_repeat 1 61 0 2 1349 366 183 0 0 chr13 100167683 100167754 -20116558 + CT-rich Low_complexity Low_complexity 5 75 0 2 1349 450 265 17 17 chr13 100169868 100169987 -20114325 + PB1D9 SINE Alu 1 119 -1 2 1349 558 0 0 0 chr13 100171423 100171485 -20112827 + (GGGA)n Simple_repeat Simple_repeat 3 64 0 2 1349 451 308 58 0 chr13 100171871 100171975 -20112337 + B4A SINE B4 2 111 -181 2 1349 294 29 0 0 chr13 100171981 100172016 -20112296 + (CA)n Simple_repeat Simple_repeat 1 35 0 2 1349 500 271 146 10 chr13 100172054 100172259 -20112053 - L1MC1 LINE L1 -30 6303 6071 2 1349 1251 41 0 0 chr13 100174294 100174441 -20109871 + B1_Mus1 SINE Alu 2 148 0 2 1349 219 103 0 0 chr13 100174441 100174480 -20109832 + (A)n Simple_repeat Simple_repeat 1 39 0 2 1349 360 195 26 13 chr13 100175295 100175373 -20108939 - ID4_ SINE ID 0 83 5 2 1349 1413 65 16 0 chr13 100175941 100176125 -20108187 - B2_Mm2 SINE B2 -7 188 2 2 1349 869 268 5 0 chr13 100176241 100176439 -20107873 + B3 SINE B2 1 199 -17 2 1349 331 174 200 20 chr13 100176636 100176736 -20107576 + B1F1 SINE Alu 14 131 -18 2 1349 301 214 18 0 chr13 100178260 100178316 -20105996 + RSINE1 SINE B4 7 63 -102 2 1349 216 0 0 0 chr13 100178340 100178364 -20105948 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1349 417 39 0 0 chr13 100178364 100178414 -20105898 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 1349 404 208 39 0 chr13 100178454 100178531 -20105781 + B1_Mur1 SINE Alu 70 149 0 2 1349 235 308 63 13 chr13 100178662 100178741 -20105571 + ID_B1 SINE B4 12 94 -130 2 1349 389 270 173 32 chr13 100179451 100179700 -20104612 - L1ME4a LINE L1 0 6124 5841 2 1349 543 239 56 62 chr13 100181757 100181935 -20102377 + B4 SINE B4 14 190 -102 2 1349 1243 42 0 0 chr13 100183203 100183347 -20100965 + B1_Mus2 SINE Alu 2 145 -2 2 1349 430 299 132 59 chr13 100187531 100187929 -20096383 + MLT1B LTR MaLR 13 467 0 2 1349 186 43 0 0 chr13 100187938 100187961 -20096351 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1349 238 314 142 38 chr13 100189527 100189739 -20094573 - LTR16E1 LTR ERVL -69 469 236 2 1349 483 333 42 0 chr13 100189836 100190001 -20094311 + MER20 DNA MER1_type 3 174 -45 2 1349 261 145 0 0 chr13 100190911 100190973 -20093339 + (T)n Simple_repeat Simple_repeat 1 62 0 2 1349 1040 105 0 0 chr13 100190973 100191116 -20093196 - B1_Mus1 SINE Alu 0 148 6 2 1349 412 245 42 114 chr13 100190979 100191145 -20093167 - B4A SINE B4 -71 221 68 2 1349 29 28 0 0 chr13 100193078 100193114 -20091198 + AT_rich Low_complexity Low_complexity 1 36 0 2 1349 188 269 83 98 chr13 100193231 100193363 -20090949 - L3 LINE CR1 -2264 2225 2096 2 1349 21 57 0 0 chr13 100193447 100193482 -20090830 + AT_rich Low_complexity Low_complexity 1 35 0 2 1349 234 0 0 0 chr13 100194370 100194396 -20089916 + (A)n Simple_repeat Simple_repeat 1 26 0 2 1349 277 206 10 10 chr13 100195344 100195442 -20088870 + CT-rich Low_complexity Low_complexity 2 99 0 3 1349 195 348 58 0 chr13 100195610 100195679 -20088633 + MIRm SINE MIR 203 275 -1 3 1349 30 0 0 0 chr13 100196112 100196142 -20088170 + AT_rich Low_complexity Low_complexity 1 30 0 3 1349 843 203 0 26 chr13 100197690 100197842 -20086470 + B1_Mur4 SINE Alu 2 149 -1 3 1349 964 279 213 10 chr13 100197940 100198420 -20085892 + RCHARR1 DNA MER1_type 9 585 -389 3 1349 22 35 0 0 chr13 100198742 100198771 -20085541 + AT_rich Low_complexity Low_complexity 1 29 0 3 1349 392 337 121 42 chr13 100203799 100204305 -20080007 - HAL1 LINE L1 -1036 1471 860 3 1349 777 160 0 0 chr13 100205767 100205886 -20078426 + B1_Mur3 SINE Alu 30 148 -1 3 1349 642 173 240 34 chr13 100206531 100206710 -20077602 - B3 SINE B2 0 216 1 3 1349 227 114 0 22 chr13 100206739 100206784 -20077528 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 3 1349 1236 47 0 0 chr13 100206784 100206932 -20077380 - B1_Mus1 SINE Alu 0 148 1 3 1349 426 336 218 27 chr13 100207940 100208417 -20075895 + L3 LINE CR1 3271 3838 -651 3 1349 315 331 23 39 chr13 100208421 100208550 -20075762 + Arthur1A DNA Tip100 4 130 -47 3 1349 369 0 0 0 chr13 100208737 100208778 -20075534 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 1349 459 174 0 0 chr13 100208778 100208864 -20075448 + (TG)n Simple_repeat Simple_repeat 2 87 0 3 1349 312 260 0 52 chr13 100208865 100208942 -20075370 - ID4 SINE ID -9 74 2 3 1349 999 198 53 24 chr13 100209569 100209776 -20074536 - B3 SINE B2 -3 213 1 3 1349 202 139 23 0 chr13 100212650 100212693 -20071619 + A-rich Low_complexity Low_complexity 3 46 0 3 1349 617 304 93 16 chr13 100212846 100213258 -20071054 + L1MB7 LINE L1 5719 6165 -19 3 1349 1046 279 122 24 chr13 100215236 100215786 -20068526 + L1MB4 LINE L1 5570 6173 -7 3 1349 222 292 107 49 chr13 100216077 100216282 -20068030 - MIR SINE MIR -33 229 13 3 1349 983 227 77 0 chr13 100218391 100218598 -20065714 + ID_B1 SINE B4 2 224 0 3 1349 1140 55 21 0 chr13 100218626 100218771 -20065541 - B1_Mus1 SINE Alu 0 148 1 3 1349 1306 45 11 11 chr13 100221720 100221898 -20062414 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 3 1349 711 65 0 0 chr13 100221898 100221991 -20062321 + (TCCC)n Simple_repeat Simple_repeat 4 96 0 3 1349 591 53 0 0 chr13 100221991 100222065 -20062247 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 3 1349 674 291 34 17 chr13 100222066 100222244 -20062068 - B3A SINE B2 -16 182 2 3 1349 270 247 161 0 chr13 100222251 100222332 -20061980 - PB1D10 SINE Alu -21 96 3 3 1349 198 103 0 0 chr13 100222776 100222805 -20061507 + (CAAA)n Simple_repeat Simple_repeat 3 31 0 3 1349 203 156 156 0 chr13 100223012 100223057 -20061255 - MIRm SINE MIR -123 153 102 3 1349 542 93 0 0 chr13 100223145 100223220 -20061092 - B2_Mm2 SINE B2 -118 77 3 3 1349 213 313 27 108 chr13 100223256 100223421 -20060891 - MIR SINE MIR -104 158 13 3 1349 813 176 28 0 chr13 100223553 100223695 -20060617 + B1_Mus2 SINE Alu 1 146 -1 3 1349 495 0 0 0 chr13 100223725 100223780 -20060532 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 1349 339 256 0 35 chr13 100224015 100224100 -20060212 - ID4 SINE ID 0 83 2 3 1349 350 241 0 33 chr13 100224108 100224198 -20060114 - PB1D10 SINE Alu -1 116 30 3 1349 188 302 0 0 chr13 100224476 100224529 -20059783 + L2b LINE L2 3323 3375 0 3 1349 190 310 148 49 chr13 100224526 100224709 -20059603 - MIRb SINE MIR 0 268 68 3 1349 252 0 0 0 chr13 100224771 100224799 -20059513 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 3 1349 464 256 28 42 chr13 100224799 100224942 -20059370 - B1F SINE Alu -8 141 1 3 1349 302 214 54 0 chr13 100225552 100225636 -20058676 - MER5A DNA MER1_type -66 123 36 3 1349 678 265 40 53 chr13 100226203 100226430 -20057882 - ID_B1 SINE B4 0 224 1 3 1349 1297 174 5 18 chr13 100226652 100226875 -20057437 + URR1B DNA MER1_type 1 220 -5 3 1349 3911 45 19 0 chr13 100227535 100228001 -20056311 + MT2C_Mm LTR ERVL 1 475 0 3 1349 261 203 0 106 chr13 100228029 100228093 -20056219 - B1_Mur2 SINE Alu -1 148 92 3 1349 494 167 12 0 chr13 100228093 100228177 -20056135 + RLTR13C2 LTR ERVK 1 85 -723 3 1349 1584 52 5 0 chr13 100228489 100228681 -20055631 - B2_Mm1t SINE B2 0 193 1 3 1349 184 279 73 55 chr13 100228975 100229085 -20055227 + L2b LINE L2 3224 3335 -40 3 1349 206 237 134 73 chr13 100229748 100229830 -20054482 + MIR SINE MIR 10 96 -172 3 1349 376 284 0 0 chr13 100230079 100230160 -20054152 - B3A SINE B2 -117 81 1 3 1349 501 270 214 16 chr13 100230594 100230786 -20053526 + B4A SINE B4 1 230 -62 3 1349 861 187 118 21 chr13 100230786 100230972 -20053340 + B3 SINE B2 1 204 -12 3 1349 789 11 0 0 chr13 100231068 100231158 -20053154 + (TC)n Simple_repeat Simple_repeat 1 90 0 3 1349 432 0 0 0 chr13 100231158 100231205 -20053107 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1349 1976 138 101 12 chr13 100231430 100231767 -20052545 + ORR1B2 LTR MaLR 1 367 0 3 1349 632 277 21 48 chr13 100232277 100232463 -20051849 - B3A SINE B2 -17 181 1 3 1349 714 235 0 0 chr13 100232630 100232766 -20051546 - B1_Mur2 SINE Alu -12 137 2 3 1349 344 40 20 0 chr13 100233303 100233353 -20050959 + (TA)n Simple_repeat Simple_repeat 1 51 0 3 1349 2088 143 169 118 chr13 100233799 100234339 -20049973 + RLTR12A LTR ERVK 1 567 -1 3 1349 1108 213 0 27 chr13 100234812 100235034 -20049278 + B3 SINE B2 1 216 0 3 1349 491 82 34 34 chr13 100235711 100235799 -20048513 - L1Md_F2 LINE L1 -3 6579 6492 3 1349 1240 86 0 0 chr13 100235820 100235982 -20048330 + B2_Mm2 SINE B2 1 162 -33 3 1349 195 42 0 0 chr13 100235982 100236006 -20048306 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1349 307 257 48 38 chr13 100237048 100237153 -20047159 - PB1D10 SINE Alu -11 106 1 3 1349 1128 112 11 48 chr13 100237763 100237950 -20046362 + B2_Mm2 SINE B2 2 181 -14 3 1349 224 313 60 0 chr13 100238752 100238835 -20045477 + MIRb SINE MIR 106 193 -75 3 1349 586 279 51 19 chr13 100238992 100239149 -20045163 + RSINE1 SINE B4 3 164 -1 3 1349 927 73 0 0 chr13 100239171 100239295 -20045017 + (TGGA)n Simple_repeat Simple_repeat 3 126 0 3 1349 218 306 27 27 chr13 100239857 100239931 -20044381 - MIRb SINE MIR -6 262 189 3 1349 792 208 37 42 chr13 100241229 100241420 -20042892 - B3 SINE B2 0 216 27 3 1349 297 0 0 0 chr13 100241432 100241465 -20042847 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1349 30 0 0 0 chr13 100241780 100241810 -20042502 + AT_rich Low_complexity Low_complexity 1 30 0 3 1349 360 0 0 0 chr13 100242243 100242283 -20042029 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1349 297 269 311 0 chr13 100242849 100243050 -20041262 + MLT2B5 LTR ERVL 1 263 -291 3 1349 1038 232 0 50 chr13 100243059 100243076 -20041236 - B3 SINE B2 -5 211 201 3 1349 228 35 0 0 chr13 100243076 100243105 -20041207 + (TTTTA)n Simple_repeat Simple_repeat 5 33 0 3 1349 1038 232 0 50 chr13 100243105 100243175 -20041137 - B3 SINE B2 -16 200 132 3 1349 1330 144 28 14 chr13 100243175 100243393 -20040919 + URR1B DNA MER1_type 5 225 0 3 1349 1038 232 0 50 chr13 100243393 100243522 -20040790 - B3 SINE B2 -85 131 5 3 1349 415 284 169 81 chr13 100243517 100243801 -20040511 + MLT2B5 LTR ERVL 278 586 -15 3 1349 198 0 0 0 chr13 100245217 100245239 -20039073 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 3 1349 423 0 0 0 chr13 100246538 100246585 -20037727 + (TTA)n Simple_repeat Simple_repeat 2 48 0 3 1349 575 108 11 0 chr13 100246585 100246678 -20037634 + (TAG)n Simple_repeat Simple_repeat 3 96 0 3 1349 197 200 0 0 chr13 100248245 100248285 -20036027 - L2b LINE L2 -25 3350 3311 3 1349 463 206 8 116 chr13 100249835 100249956 -20034356 - PB1D7 SINE Alu -11 109 2 3 1349 373 327 0 9 chr13 100249995 100250100 -20034212 + MIR SINE MIR 28 131 -131 3 1349 314 300 209 0 chr13 100250172 100250282 -20034030 + ID_B1 SINE B4 3 135 -89 3 1349 441 0 0 0 chr13 100250282 100250331 -20033981 + (TGG)n Simple_repeat Simple_repeat 1 49 0 3 1349 486 0 0 0 chr13 100250331 100250385 -20033927 + (GGA)n Simple_repeat Simple_repeat 1 54 0 3 1349 429 20 0 0 chr13 100250433 100250483 -20033829 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 3 1349 285 56 0 0 chr13 100251268 100251304 -20033008 - U2 snRNA snRNA -152 36 1 3 1349 778 273 63 77 chr13 100252678 100252744 -20031568 + MLT1C LTR MaLR 117 183 -284 3 1349 662 266 51 6 chr13 100252744 100252922 -20031390 + B3A SINE B2 1 186 -12 3 1349 778 273 63 77 chr13 100252922 100252999 -20031313 + MLT1C LTR MaLR 184 242 -225 3 1349 1101 111 178 5 chr13 100252999 100253190 -20031122 + URR1B DNA MER1_type 1 224 -1 3 1349 778 273 63 77 chr13 100253190 100253394 -20030918 + MLT1C LTR MaLR 243 459 -8 3 1349 527 309 0 7 chr13 100254071 100254208 -20030104 + B1F SINE Alu 1 136 -13 3 1349 294 29 0 0 chr13 100254208 100254243 -20030069 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 3 1349 491 196 11 0 chr13 100254425 100254517 -20029795 - B3 SINE B2 -2 214 122 3 1349 305 289 77 0 chr13 100254489 100254593 -20029719 - B2_Mm2 SINE B2 -57 138 27 3 1349 333 0 0 0 chr13 100254614 100254651 -20029661 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1349 350 224 355 0 chr13 100254665 100254772 -20029540 - RSINE1 SINE B4 -19 146 2 3 1349 337 213 0 16 chr13 100256022 100256084 -20028228 + ID4 SINE ID 23 83 0 3 1349 405 136 0 0 chr13 100256177 100256243 -20028069 + (CCA)n Simple_repeat Simple_repeat 1 66 0 3 1349 24 0 0 0 chr13 100256282 100256306 -20028006 + AT_rich Low_complexity Low_complexity 1 24 0 3 1349 848 168 28 7 chr13 100257090 100257234 -20027078 - B1_Mur3 SINE Alu -1 148 2 4 1349 434 255 9 32 chr13 100257556 100257691 -20026621 + B1_Mur1 SINE Alu 3 122 -27 4 1349 505 153 23 34 chr13 100257719 100257895 -20026417 + (CAGAGA)n Simple_repeat Simple_repeat 1 174 0 4 1349 414 355 88 53 chr13 100258737 100259249 -20025063 - L1M5 LINE L1 -341 5783 5254 4 1349 260 286 52 52 chr13 100260584 100260680 -20023632 + PB1D9 SINE Alu 23 118 -2 4 1349 734 129 121 0 chr13 100261505 100261629 -20022683 + B1_Mur3 SINE Alu 2 140 -9 4 1349 193 260 193 64 chr13 100262108 100262248 -20022064 - MIRc SINE MIR -87 181 24 4 1349 195 42 0 0 chr13 100262606 100262630 -20021682 + (TTG)n Simple_repeat Simple_repeat 1 24 0 4 1349 360 0 0 0 chr13 100262819 100262859 -20021453 + (TG)n Simple_repeat Simple_repeat 2 41 0 4 1349 263 93 23 0 chr13 100263891 100263934 -20020378 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1349 308 300 79 57 chr13 100265288 100265553 -20018759 + L1M6 LINE L1 801 1071 -5425 4 1349 1568 53 0 5 chr13 100266326 100266517 -20017795 - B2_Mm1t SINE B2 -2 191 2 4 1349 315 71 0 0 chr13 100266583 100266625 -20017687 + (TTAA)n Simple_repeat Simple_repeat 4 45 0 4 1349 201 292 169 0 chr13 100266958 100267047 -20017265 - MIRc SINE MIR -134 134 31 4 1349 1327 135 18 31 chr13 100268498 100268727 -20015585 + URR1A DNA MER1_type 1 226 0 4 1349 351 0 0 0 chr13 100269068 100269107 -20015205 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1349 616 148 25 26 chr13 100269388 100269527 -20014785 + B1_Mus2 SINE Alu 16 149 0 4 1349 903 67 0 0 chr13 100269531 100269650 -20014662 + (TAGA)n Simple_repeat Simple_repeat 4 122 0 4 1350 739 168 0 48 chr13 100270390 100270515 -20013797 + B3 SINE B2 1 119 -97 4 1350 465 19 0 0 chr13 100270537 100270591 -20013721 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1350 198 150 0 0 chr13 100271754 100271794 -20012518 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1350 234 91 0 0 chr13 100273344 100273377 -20010935 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 4 1350 217 281 168 42 chr13 100274343 100274462 -20009850 - MIR SINE MIR -124 138 5 4 1350 441 0 0 0 chr13 100274609 100274658 -20009654 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1350 180 0 0 0 chr13 100276992 100277012 -20007300 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1350 424 262 46 18 chr13 100279648 100279757 -20004555 - B1F SINE Alu 0 149 38 4 1350 21 0 0 0 chr13 100280463 100280484 -20003828 + AT_rich Low_complexity Low_complexity 1 21 0 4 1350 209 171 0 0 chr13 100280927 100280962 -20003350 + G-rich Low_complexity Low_complexity 1 35 0 4 1350 183 129 0 0 chr13 100281912 100281943 -20002369 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1350 351 0 0 0 chr13 100282988 100283027 -20001285 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 4 1350 357 82 0 0 chr13 100283573 100283622 -20000690 + (A)n Simple_repeat Simple_repeat 1 49 0 4 1350 310 211 105 9 chr13 100283696 100283801 -20000511 + L1ME3A LINE L1 6020 6134 -39 4 1350 305 111 0 36 chr13 100283822 100283878 -20000434 + (TTCC)n Simple_repeat Simple_repeat 4 57 0 4 1350 201 297 117 39 chr13 100284229 100284383 -19999929 + MIRc SINE MIR 63 228 -40 4 1350 23 54 0 0 chr13 100284397 100284434 -19999878 + AT_rich Low_complexity Low_complexity 1 37 0 4 1350 369 0 0 0 chr13 100285713 100285754 -19998558 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1350 339 198 68 121 chr13 100287900 100287917 -19996395 + PB1 SINE Alu 3 125 0 4 1350 636 170 44 9 chr13 100287917 100288030 -19996282 + ID_B1 SINE B4 105 221 -3 4 1350 3542 23 2 0 chr13 100288113 100288508 -19995804 + MTA_Mm LTR MaLR 1 396 0 4 1350 643 288 26 0 chr13 100289028 100289181 -19995131 - MTEa LTR MaLR -205 174 18 4 1350 382 324 72 32 chr13 100289201 100289450 -19994862 - MER113 DNA MER1_type -112 409 151 4 1350 540 285 8 23 chr13 100289485 100289618 -19994694 + RSINE1 SINE B4 2 132 -33 4 1350 567 0 0 0 chr13 100290443 100290506 -19993806 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 4 1350 931 91 0 10 chr13 100290541 100290685 -19993627 + B1_Mur4 SINE Alu 3 139 -11 4 1350 234 0 0 0 chr13 100290686 100290712 -19993600 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1350 281 269 120 44 chr13 100290720 100290903 -19993409 - L1MC5 LINE L1 -785 7176 6980 4 1350 4908 128 19 26 chr13 100290937 100291732 -19992580 + Lx4A LINE L1 6267 7055 -3 4 1350 180 0 0 0 chr13 100291732 100291752 -19992560 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 4 1350 351 197 0 0 chr13 100292726 100292787 -19991525 + tRNA-Ala-GCY_ tRNA tRNA 1 61 -14 4 1350 343 276 30 20 chr13 100292787 100292821 -19991491 + BC1_Mm scRNA scRNA 7 102 -50 4 1350 438 69 0 0 chr13 100292866 100292924 -19991388 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1350 285 278 42 34 chr13 100292940 100293059 -19991253 - L1M5 LINE L1 -415 5825 5706 4 1350 1045 265 49 70 chr13 100293061 100293446 -19990866 - MTEb LTR MaLR -2 377 1 4 1350 1260 92 11 31 chr13 100293592 100293783 -19990529 - B2_Mm2 SINE B2 -7 188 2 4 1350 445 175 10 10 chr13 100293823 100293927 -19990385 + CT-rich Low_complexity Low_complexity 3 106 0 4 1350 586 203 161 8 chr13 100293947 100294071 -19990241 - B1_Mur2 SINE Alu -5 144 2 4 1350 256 288 0 132 chr13 100294071 100294113 -19990199 - MT2B LTR ERVL -444 157 134 4 1350 471 112 0 0 chr13 100294485 100294565 -19989747 + (CA)n Simple_repeat Simple_repeat 2 81 0 4 1350 183 205 0 0 chr13 100295454 100295493 -19988819 + (TA)n Simple_repeat Simple_repeat 1 39 0 4 1350 362 296 0 36 chr13 100296133 100296245 -19988067 - RSINE1 SINE B4 -54 111 4 4 1350 294 229 33 0 chr13 100296252 100296313 -19987999 - ID_B1 SINE B4 -1 223 161 4 1350 225 0 0 0 chr13 100296674 100296699 -19987613 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1350 1140 67 0 0 chr13 100297300 100297450 -19986862 + (TG)n Simple_repeat Simple_repeat 2 151 0 4 1350 804 297 34 29 chr13 100297486 100297725 -19986587 - B4A SINE B4 -6 286 47 4 1350 334 326 20 14 chr13 100297792 100297938 -19986374 - L1M5 LINE L1 -812 5334 5188 4 1350 3279 53 5 0 chr13 100299087 100299485 -19984827 - MTB LTR MaLR 0 400 1 4 1350 867 261 140 94 chr13 100299541 100299594 -19984718 + MLT1D LTR MaLR 6 75 -430 4 1350 970 175 160 0 chr13 100299594 100299788 -19984524 - URR1B DNA MER1_type 0 225 1 4 1350 867 261 140 94 chr13 100299788 100299846 -19984466 + MLT1D LTR MaLR 76 128 -377 4 1350 2457 76 31 3 chr13 100299846 100300164 -19984148 - ORR1A2 LTR MaLR 0 327 1 4 1350 867 261 140 94 chr13 100300164 100300467 -19983845 + MLT1D LTR MaLR 129 445 -60 4 1350 2716 70 6 3 chr13 100300467 100300823 -19983489 + L1_Mus3 LINE L1 6280 6636 -2 4 1350 867 261 140 94 chr13 100300823 100300884 -19983428 + MLT1D LTR MaLR 446 505 0 4 1350 204 103 24 49 chr13 100301284 100301325 -19982987 + (TGGG)n Simple_repeat Simple_repeat 3 42 0 4 1350 262 253 23 57 chr13 100301462 100301550 -19982762 - MIRm SINE MIR -16 260 176 4 1350 334 216 143 8 chr13 100301607 100301733 -19982579 - L1MA9 LINE L1 -1 6311 6169 4 1350 429 198 0 0 chr13 100301757 100301853 -19982459 + (TG)n Simple_repeat Simple_repeat 1 96 0 4 1350 587 184 105 0 chr13 100302357 100302471 -19981841 - B1_Mur4 SINE Alu 0 150 25 4 1350 1372 187 100 17 chr13 100303717 100304016 -19980296 + MTC LTR MaLR 1 324 -97 4 1350 2090 140 8 108 chr13 100304881 100305280 -19979032 + ORR1B2 LTR MaLR 1 359 -8 4 1350 351 280 50 0 chr13 100306846 100306946 -19977366 + PB1D10 SINE Alu 13 117 0 4 1350 1206 36 0 0 chr13 100307102 100307240 -19977072 + B1_Mm SINE Alu 1 138 -9 4 1350 230 0 33 0 chr13 100307240 100307270 -19977042 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1350 636 163 88 16 chr13 100307350 100307463 -19976849 + B1_Mus2 SINE Alu 14 137 -10 4 1350 216 0 0 0 chr13 100307463 100307487 -19976825 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1350 636 163 88 16 chr13 100307487 100307498 -19976814 + B1_Mus2 SINE Alu 138 146 -1 4 1350 208 80 59 20 chr13 100308660 100308711 -19975601 + (GTTTG)n Simple_repeat Simple_repeat 2 54 0 4 1350 194 274 138 26 chr13 100309160 100309276 -19975036 - L2 LINE L2 -557 2862 2734 4 1350 339 312 45 17 chr13 100309438 100309614 -19974698 - ORR1E LTR MaLR -178 181 1 4 1350 192 40 0 0 chr13 100310033 100310058 -19974254 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1350 202 295 12 60 chr13 100310168 100310251 -19974061 + L2a LINE L2 3342 3420 -6 4 1350 235 319 62 78 chr13 100310256 100310385 -19973927 - MTD LTR MaLR -142 277 151 4 1350 190 319 130 0 chr13 100311574 100311643 -19972669 - MIRm SINE MIR -6 270 193 4 1350 297 128 0 0 chr13 100311915 100311962 -19972350 + (TCCC)n Simple_repeat Simple_repeat 4 50 0 4 1350 567 299 87 47 chr13 100312003 100312301 -19972011 + LTR31 LTR ERV1 293 602 -17 4 1350 521 258 77 41 chr13 100313050 100313220 -19971092 - ORR1D2 LTR MaLR -2 368 193 4 1350 2303 238 47 10 chr13 100313258 100313772 -19970540 - MT2A LTR ERVL 0 533 1 4 1350 546 257 34 20 chr13 100313772 100313890 -19970422 - ORR1D2 LTR MaLR -239 131 12 4 1350 628 148 54 27 chr13 100313959 100314070 -19970242 + PB1D9 SINE Alu 3 116 -4 4 1350 604 135 18 0 chr13 100314075 100314186 -19970126 + GA-rich Low_complexity Low_complexity 2 114 0 4 1350 1142 90 6 25 chr13 100314186 100314553 -19969759 + (GAAA)n Simple_repeat Simple_repeat 1 359 0 4 1350 243 0 0 0 chr13 100314553 100314603 -19969709 + (GGAA)n Simple_repeat Simple_repeat 1 50 0 4 1350 297 231 15 0 chr13 100314864 100314929 -19969383 - ID4 SINE ID -16 67 2 4 1350 287 289 10 40 chr13 100314932 100315033 -19969279 - ID_B1 SINE B4 -3 221 124 4 1350 207 0 0 0 chr13 100316287 100316310 -19968002 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1350 274 309 34 81 chr13 100317142 100317290 -19967022 - B1F1 SINE Alu -1 148 8 5 1350 754 236 60 0 chr13 100317331 100317513 -19966799 - B3A SINE B2 -1 197 5 5 1350 306 268 168 40 chr13 100317537 100317638 -19966674 - PB1D10 SINE Alu -1 116 3 5 1350 186 330 63 42 chr13 100318018 100318113 -19966199 - L3 LINE CR1 -139 4350 4254 5 1350 261 315 0 14 chr13 100320452 100320526 -19963786 - ID4_ SINE ID -6 77 5 5 1350 799 246 79 54 chr13 100321140 100321279 -19963033 - RLTR25B LTR ERVK -1 1027 890 5 1350 195 69 0 0 chr13 100321279 100321308 -19963004 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 5 1350 799 246 79 54 chr13 100321308 100321447 -19962865 - RLTR25B LTR ERVK -139 889 742 5 1350 22 0 0 0 chr13 100321461 100321483 -19962829 + AT_rich Low_complexity Low_complexity 1 22 0 5 1350 22 56 0 0 chr13 100321696 100321732 -19962580 + AT_rich Low_complexity Low_complexity 1 36 0 5 1350 750 198 132 16 chr13 100321799 100321989 -19962323 - RLTR25B LTR ERVK -166 862 651 5 1350 2485 168 46 22 chr13 100321976 100322136 -19962176 - RLTR25B LTR ERVK -549 479 319 5 1350 756 126 0 0 chr13 100322136 100322255 -19962057 + (TA)n Simple_repeat Simple_repeat 2 120 0 5 1350 2485 168 46 22 chr13 100322255 100322550 -19961762 - RLTR25B LTR ERVK -710 318 13 5 1350 2590 126 65 28 chr13 100322587 100322832 -19961480 + RLTR11B LTR ERVK 1 256 -197 5 1350 2866 61 0 0 chr13 100322832 100323174 -19961138 - ORR1A1 LTR MaLR -4 342 1 5 1350 2590 126 65 28 chr13 100323174 100323362 -19960950 + RLTR11B LTR ERVK 257 450 -3 5 1350 1993 134 95 11 chr13 100323552 100323743 -19960569 - RMER17C LTR ERVK 0 410 215 5 1350 471 35 0 0 chr13 100323743 100323800 -19960512 + (GA)n Simple_repeat Simple_repeat 2 58 0 5 1350 1993 134 95 11 chr13 100323800 100323986 -19960326 - RMER17C LTR ERVK -196 214 1 5 1350 23 33 0 0 chr13 100324753 100324783 -19959529 + AT_rich Low_complexity Low_complexity 1 30 0 5 1350 828 181 0 28 chr13 100325535 100325677 -19958635 - B1_Mus2 SINE Alu -5 142 5 5 1350 1105 68 0 40 chr13 100326078 100326161 -19958151 + B1_Mus2 SINE Alu 2 84 -63 5 1350 3523 23 2 0 chr13 100326161 100326556 -19957756 + MTA_Mm LTR MaLR 1 396 0 5 1350 1105 68 0 40 chr13 100326556 100326624 -19957688 + B1_Mus2 SINE Alu 85 147 0 5 1350 369 0 0 0 chr13 100326658 100326699 -19957613 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1350 324 0 0 0 chr13 100326699 100326734 -19957578 + (GA)n Simple_repeat Simple_repeat 2 37 0 5 1350 611 306 75 66 chr13 100327396 100327743 -19956569 - ORR1E LTR MaLR -9 350 1 5 1350 3505 216 52 149 chr13 100328202 100329234 -19955078 + RMER1B Other Other 24 942 -124 5 1350 207 0 0 0 chr13 100329234 100329257 -19955055 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1350 3505 216 52 149 chr13 100329257 100329379 -19954933 + RMER1B Other Other 943 1066 0 5 1350 585 234 64 6 chr13 100329387 100329559 -19954753 + L1M4 LINE L1 5273 5454 -720 5 1350 335 305 73 66 chr13 100329757 100329894 -19954418 - ORR1D2 LTR MaLR -232 138 1 5 1350 1723 21 0 0 chr13 100330210 100330403 -19953909 + B2_Mm1a SINE B2 1 193 0 5 1350 269 308 124 88 chr13 100331048 100331297 -19953015 - Charlie8 DNA MER1_type -2087 341 84 5 1350 23 0 0 0 chr13 100331420 100331443 -19952869 + GC_rich Low_complexity Low_complexity 1 23 0 5 1350 225 348 135 0 chr13 100331962 100332051 -19952261 + MIR SINE MIR 10 110 -152 5 1350 538 113 21 0 chr13 100332771 100332868 -19951444 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 5 1350 477 0 0 0 chr13 100333399 100333452 -19950860 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1350 459 0 0 0 chr13 100333452 100333502 -19950810 + (GA)n Simple_repeat Simple_repeat 2 52 0 5 1350 223 85 0 41 chr13 100333594 100333643 -19950669 + (CAAAA)n Simple_repeat Simple_repeat 1 47 0 5 1350 564 263 167 22 chr13 100334570 100334716 -19949596 + L1MA4 LINE L1 5623 5784 -516 5 1350 387 0 0 0 chr13 100334716 100334759 -19949553 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1350 324 0 0 0 chr13 100334759 100334794 -19949518 + (GA)n Simple_repeat Simple_repeat 1 36 0 5 1350 564 263 167 22 chr13 100334794 100334922 -19949390 + L1MA4 LINE L1 5785 5937 -363 5 1350 897 115 7 0 chr13 100335046 100335185 -19949127 + B2_Mm2 SINE B2 1 140 -55 5 1350 195 42 0 0 chr13 100335201 100335225 -19949087 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 5 1350 187 116 45 23 chr13 100335648 100335692 -19948620 + CT-rich Low_complexity Low_complexity 3 47 0 5 1350 844 162 13 13 chr13 100335700 100335850 -19948462 - B1_Mur4 SINE Alu 0 150 1 5 1350 444 19 0 0 chr13 100336014 100336067 -19948245 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1350 328 326 84 35 chr13 100336075 100336218 -19948094 - B3A SINE B2 -48 150 1 5 1350 1102 203 144 59 chr13 100336309 100336649 -19947663 - ORR1D2 LTR MaLR 0 370 2 5 1350 847 154 0 22 chr13 100337736 100337875 -19946437 + B1_Mus1 SINE Alu 1 136 -12 5 1350 333 271 135 0 chr13 100338095 100338191 -19946121 + PB1D10 SINE Alu 7 115 -2 5 1350 495 270 0 0 chr13 100338219 100338330 -19945982 + B3 SINE B2 103 213 -3 5 1350 656 225 7 14 chr13 100338334 100338474 -19945838 + B1_Mur4 SINE Alu 10 148 -2 5 1350 336 321 56 14 chr13 100338686 100338828 -19945484 - L1MB8 LINE L1 -117 6061 5914 5 1350 252 86 0 0 chr13 100339097 100339132 -19945180 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1350 222 348 29 0 chr13 100339133 100339202 -19945110 - ID4 SINE ID -10 73 3 5 1350 615 304 29 54 chr13 100339282 100339487 -19944825 - B4 SINE B4 -2 290 91 5 1350 1558 286 49 4 chr13 100339498 100339936 -19944376 - L1MB7 LINE L1 -20 6164 5708 5 1350 1580 99 13 5 chr13 100339936 100340160 -19944152 - URR1A DNA MER1_type 0 226 1 5 1350 1558 286 49 4 chr13 100340160 100340247 -19944065 - L1MB7 LINE L1 -477 5707 5616 5 1350 330 239 22 22 chr13 100340558 100340648 -19943664 - L1MB7 LINE L1 -616 5562 5473 5 1350 712 183 2 10 chr13 100340703 100341130 -19943182 + (TG)n Simple_repeat Simple_repeat 1 423 0 5 1350 819 298 24 47 chr13 100341134 100341430 -19942882 - B4A SINE B4 0 292 4 5 1350 396 229 159 0 chr13 100341442 100341615 -19942697 - L1MB7 LINE L1 -708 5466 5258 5 1350 236 283 97 0 chr13 100341721 100341834 -19942478 - L1MB7 LINE L1 -1013 5133 5010 5 1350 635 347 29 42 chr13 100342670 100342980 -19941332 + MLT1J-int LTR MaLR 460 765 -622 5 1350 2134 159 80 0 chr13 100343098 100343463 -19940849 + ORR1B1 LTR MaLR 1 394 0 5 1350 444 284 91 110 chr13 100343626 100343935 -19940377 + MLT1J LTR MaLR 9 311 -201 5 1350 270 257 64 37 chr13 100344459 100344568 -19939744 - L2c LINE L2 -4 3383 3272 5 1350 1678 207 39 37 chr13 100344576 100344745 -19939567 - MTD LTR MaLR -11 408 247 5 1350 1157 30 0 0 chr13 100344745 100344879 -19939433 + B1_Mus1 SINE Alu 2 135 -13 5 1350 630 39 0 0 chr13 100344879 100344956 -19939356 + (GA)n Simple_repeat Simple_repeat 2 78 0 5 1350 1678 207 39 37 chr13 100344956 100345192 -19939120 - MTD LTR MaLR -173 246 2 5 1350 585 64 0 0 chr13 100345674 100345752 -19938560 + (GAAA)n Simple_repeat Simple_repeat 4 81 0 5 1350 454 315 112 92 chr13 100345752 100346056 -19938256 - LTR16B LTR ERVL -151 312 3 5 1350 1103 302 29 3 chr13 100346237 100346619 -19937693 - L1MC1 LINE L1 -5 6328 5937 5 1350 427 216 41 10 chr13 100346670 100346768 -19937544 - B1F2 SINE Alu -41 108 8 5 1350 1206 128 111 19 chr13 100347394 100347601 -19936711 - URR1A DNA MER1_type 0 226 1 5 1350 319 240 115 39 chr13 100347971 100348075 -19936237 - PB1D10 SINE Alu 0 117 6 5 1350 1915 165 83 8 chr13 100348239 100348623 -19935689 + MTC LTR MaLR 9 421 0 5 1350 313 233 0 14 chr13 100348881 100348955 -19935357 + ID4_ SINE ID 1 73 -10 5 1350 1187 62 0 0 chr13 100349026 100349171 -19935141 + B1_Mus2 SINE Alu 3 147 0 5 1350 198 0 0 0 chr13 100349346 100349368 -19934944 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 5 1350 464 193 9 0 chr13 100349401 100349510 -19934802 + CT-rich Low_complexity Low_complexity 2 111 0 5 1350 449 248 36 36 chr13 100350266 100350404 -19933908 + B1F SINE Alu 6 143 -6 5 1350 261 0 0 0 chr13 100350530 100350559 -19933753 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1350 186 258 73 82 chr13 100350734 100350844 -19933468 + L3 LINE CR1 4081 4189 -300 5 1350 474 173 0 0 chr13 100350844 100350948 -19933364 + (TG)n Simple_repeat Simple_repeat 1 104 0 5 1350 820 250 60 34 chr13 100350948 100351241 -19933071 - B4A SINE B4 0 292 9 5 1350 1886 146 22 132 chr13 100351267 100351677 -19932635 + ORR1B2 LTR MaLR 3 367 0 5 1350 706 293 85 40 chr13 100351798 100352276 -19932036 - MER34A LTR ERV1 -9 533 36 5 1350 562 254 24 24 chr13 100352713 100352838 -19931474 + B1F SINE Alu 3 127 -22 5 1350 216 323 0 0 chr13 100352813 100352878 -19931434 + B1_Mur4 SINE Alu 75 139 -11 5 1350 432 0 0 0 chr13 100352878 100352926 -19931386 + (CTAAA)n Simple_repeat Simple_repeat 3 50 0 5 1350 1930 176 41 14 chr13 100352931 100353295 -19931017 + ORR1D1 LTR MaLR 1 374 0 5 1350 180 0 0 0 chr13 100353455 100353475 -19930837 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 5 1350 387 0 0 0 chr13 100354379 100354422 -19929890 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1350 580 333 19 9 chr13 100354564 100354776 -19929536 + B4A SINE B4 44 257 -35 5 1350 375 23 0 0 chr13 100354834 100354878 -19929434 + (CA)n Simple_repeat Simple_repeat 1 44 0 5 1350 532 320 69 18 chr13 100354885 100355221 -19929091 - L1MB7 LINE L1 -59 6125 5775 5 1350 235 305 19 68 chr13 100355235 100355397 -19928915 - L1MB7 LINE L1 -350 5824 5671 5 1350 920 132 28 0 chr13 100356067 100356211 -19928101 + B1_Mus1 SINE Alu 1 148 0 5 1350 621 216 0 0 chr13 100356211 100356350 -19927962 + GA-rich Low_complexity Low_complexity 3 141 0 5 1350 423 0 0 0 chr13 100356351 100356398 -19927914 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 5 1350 218 310 19 48 chr13 100356408 100356513 -19927799 - PB1 SINE Alu -25 102 1 5 1350 1036 191 46 5 chr13 100357317 100357533 -19926779 - URR1B DNA MER1_type 0 225 1 5 1350 371 333 0 33 chr13 100358193 100358314 -19925998 - RSINE1 SINE B4 -1 164 48 5 1350 1281 261 17 35 chr13 100358516 100358861 -19925451 - ORR1E LTR MaLR -17 342 4 5 1350 754 301 61 35 chr13 100358882 100359195 -19925117 + MLT1A0 LTR MaLR 20 340 -25 5 1350 424 206 0 0 chr13 100360146 100360219 -19924093 - RSINE1 SINE B4 -91 74 2 5 1350 399 319 13 6 chr13 100360438 100360596 -19923716 + CT-rich Low_complexity Low_complexity 2 160 0 5 1350 486 248 45 8 chr13 100360708 100360842 -19923470 - B1F SINE Alu 0 149 11 5 1350 530 191 48 0 chr13 100361513 100361639 -19922673 + RMER12 LTR ERVK 1191 1322 0 6 1350 903 19 0 0 chr13 100361865 100361970 -19922342 + (TC)n Simple_repeat Simple_repeat 2 106 0 6 1350 312 27 0 0 chr13 100361970 100362006 -19922306 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1350 685 248 14 7 chr13 100362009 100362155 -19922157 - B3A SINE B2 -51 147 1 6 1350 351 0 0 0 chr13 100362394 100362433 -19921879 + (TTA)n Simple_repeat Simple_repeat 2 40 0 6 1350 251 98 0 24 chr13 100362433 100362475 -19921837 - B1_Mur2 SINE Alu -12 137 97 6 1350 210 71 0 0 chr13 100362500 100362528 -19921784 + (TG)n Simple_repeat Simple_repeat 1 28 0 6 1350 360 0 0 0 chr13 100362528 100362567 -19921745 + (GA)n Simple_repeat Simple_repeat 1 40 0 6 1350 260 272 85 21 chr13 100364940 100365034 -19919278 + MER5A1 DNA MER1_type 15 114 -52 6 1350 339 96 0 0 chr13 100365090 100365142 -19919170 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1350 586 272 66 28 chr13 100365150 100365362 -19918950 - ID_B1 SINE B4 -3 221 2 6 1350 302 186 0 28 chr13 100365692 100365764 -19918548 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 6 1350 713 208 68 46 chr13 100367155 100367353 -19916959 - B3 SINE B2 -5 211 27 6 1350 1075 101 0 7 chr13 100367353 100367502 -19916810 - B1_Mus1 SINE Alu 0 148 1 6 1350 394 212 72 203 chr13 100367502 100367544 -19916768 - B3A SINE B2 -159 39 1 6 1350 672 204 151 17 chr13 100367733 100367912 -19916400 - B3 SINE B2 -11 205 3 6 1350 236 322 12 108 chr13 100368165 100368332 -19915980 - MIR SINE MIR -43 219 69 6 1350 402 272 0 0 chr13 100368642 100368745 -19915567 - ID_B1 SINE B4 -1 223 121 6 1350 467 229 0 56 chr13 100368915 100369040 -19915272 + B1F2 SINE Alu 32 149 0 6 1350 291 245 62 62 chr13 100369065 100369178 -19915134 + RMER15 LTR ERVL 16 128 -447 6 1350 930 275 71 4 chr13 100369215 100369496 -19914816 + RMER15 LTR ERVL 276 575 0 6 1350 192 335 153 5 chr13 100369708 100369924 -19914388 - L2c LINE L2 -229 3158 2911 6 1350 1021 210 43 0 chr13 100370199 100370456 -19913856 + RCHARR1 DNA MER1_type 519 786 -188 6 1350 2797 96 83 11 chr13 100370488 100370931 -19913381 - IAPLTR2_Mm LTR ERVK 0 475 1 6 1350 278 219 72 12 chr13 100371458 100371541 -19912771 + MTEa LTR MaLR 281 368 -11 6 1350 343 288 122 16 chr13 100371775 100372017 -19912295 - L1M5 LINE L1 -650 5524 5256 6 1350 336 48 0 0 chr13 100372022 100372064 -19912248 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1350 235 140 53 0 chr13 100372066 100372123 -19912189 + (TA)n Simple_repeat Simple_repeat 1 60 0 6 1350 1217 41 7 0 chr13 100372175 100372321 -19911991 - B1_Mm SINE Alu 0 147 1 6 1350 785 268 12 16 chr13 100372325 100372520 -19911792 - B3A SINE B2 -5 190 6 6 1350 338 298 92 30 chr13 100372528 100372801 -19911511 - L1M5 LINE L1 -951 5195 4906 6 1350 286 291 83 51 chr13 100372886 100373140 -19911172 - L1M5 LINE L1 -1361 4779 4518 6 1350 440 262 88 31 chr13 100373163 100373356 -19910956 + L1M5 LINE L1 2543 2746 -3400 6 1350 387 0 0 0 chr13 100373442 100373485 -19910827 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1350 438 286 106 35 chr13 100374800 100374887 -19909425 + L1MC1 LINE L1 6030 6127 -206 6 1350 1898 167 58 89 chr13 100374887 100375281 -19909031 + ORR1C2 LTR MaLR 3 384 0 6 1350 438 286 106 35 chr13 100375281 100375476 -19908836 + L1MC1 LINE L1 6128 6332 -1 6 1350 351 0 0 0 chr13 100375483 100375522 -19908790 + (TG)n Simple_repeat Simple_repeat 2 40 0 6 1350 396 0 0 0 chr13 100375667 100375711 -19908601 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1350 213 39 0 0 chr13 100376252 100376278 -19908034 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 1350 1305 20 0 0 chr13 100376443 100376595 -19907717 + (GGGAGA)n Simple_repeat Simple_repeat 3 154 0 6 1350 1247 115 130 0 chr13 100376838 100377038 -19907274 + URR1A DNA MER1_type 1 226 0 6 1350 200 176 0 0 chr13 100377801 100377835 -19906477 - L2b LINE L2 -14 3361 3328 6 1350 228 125 0 111 chr13 100379008 100379053 -19905259 - URR1B DNA MER1_type -185 40 1 6 1350 249 227 30 15 chr13 100379679 100379746 -19904566 + CT-rich Low_complexity Low_complexity 3 70 0 6 1350 240 111 0 0 chr13 100380145 100380181 -19904131 + (TCC)n Simple_repeat Simple_repeat 2 37 0 6 1350 186 43 0 0 chr13 100380353 100380376 -19903936 + (CCCCCA)n Simple_repeat Simple_repeat 2 24 0 6 1350 534 31 0 0 chr13 100381091 100381155 -19903157 + (GA)n Simple_repeat Simple_repeat 1 64 0 6 1350 540 185 0 9 chr13 100381603 100381712 -19902600 - URR1B DNA MER1_type -17 208 101 6 1350 1308 165 19 0 chr13 100383680 100383892 -19900420 - B3 SINE B2 0 216 1 6 1350 3478 35 0 0 chr13 100384578 100384974 -19899338 + MTA_Mm LTR MaLR 1 396 0 6 1350 9548 30 0 0 chr13 100384974 100386072 -19898240 + MTA_Mm-int LTR MaLR 1 1098 0 6 1350 3478 35 0 0 chr13 100386072 100386468 -19897844 + MTA_Mm LTR MaLR 1 396 0 6 1350 183 42 0 0 chr13 100388040 100388064 -19896248 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 6 1350 412 278 59 13 chr13 100388202 100388355 -19895957 + MIRc SINE MIR 84 243 -25 6 1350 198 307 9 114 chr13 100388454 100388568 -19895744 - L2c LINE L2 0 3387 3286 6 1350 347 340 81 13 chr13 100390654 100390803 -19893509 - L2b LINE L2 0 3375 3217 6 1350 2360 116 0 0 chr13 100390857 100391184 -19893128 + ORR1A2 LTR MaLR 1 327 0 6 1350 930 357 51 7 chr13 100392100 100392510 -19891802 - LTR16B1 LTR ERVL -34 429 8 6 1350 1169 150 157 216 chr13 100392510 100392918 -19891394 + ORR1C2 LTR MaLR 1 384 0 6 1350 372 368 63 30 chr13 100393488 100393855 -19890457 - HERV16-int LTR ERVL -2300 2696 2318 6 1350 1192 118 28 0 chr13 100394099 100394277 -19890035 - B2_Mm1t SINE B2 -10 183 1 6 1350 260 287 156 21 chr13 100395630 100395726 -19888586 + L2a LINE L2 3303 3411 -15 6 1350 600 312 128 32 chr13 100395734 100396264 -19888048 - L1ME2z LINE L1 -277 6340 5760 6 1350 364 293 57 14 chr13 100396306 100396517 -19887795 - L1ME2z LINE L1 -653 5682 5463 6 1350 5826 99 7 14 chr13 100396538 100397370 -19886942 + L1Md_F2 LINE L1 5757 6582 0 6 1350 862 325 26 21 chr13 100397491 100397880 -19886432 - Lx9 LINE L1 -179 7465 7075 6 1350 235 333 47 38 chr13 100398147 100398253 -19886059 - L1ME2z LINE L1 -1163 5156 5050 6 1350 897 316 110 37 chr13 100398296 100398772 -19885540 - L1ME2z LINE L1 -1775 4544 4050 6 1350 387 0 0 0 chr13 100398772 100398815 -19885497 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1350 897 316 110 37 chr13 100398815 100399327 -19884985 - L1ME2z LINE L1 -2270 4049 3485 6 1350 491 207 9 0 chr13 100399371 100399487 -19884825 - Lx9 LINE L1 -11 7633 7517 6 1350 270 0 0 0 chr13 100399487 100399517 -19884795 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1350 1728 186 27 24 chr13 100399517 100399853 -19884459 - Lx9 LINE L1 -168 7476 7140 6 1350 331 156 31 15 chr13 100399836 100399901 -19884411 - Lx9 LINE L1 -628 7016 6951 6 1350 270 271 8 8 chr13 100399937 100400056 -19884256 - L1ME2z LINE L1 -3222 3097 2979 6 1350 283 296 92 0 chr13 100400111 100400209 -19884103 - L1ME2z LINE L1 -3439 2880 2774 6 168 692 293 51 31 chr13 100400779 100401218 -19883094 - L1ME2z LINE L1 -3709 2610 2168 6 1351 462 301 0 0 chr13 100401252 100401365 -19882947 + RSINE1 SINE B4 4 116 -49 6 1351 4766 71 24 49 chr13 100401448 100402207 -19882105 + RMER17A LTR ERVK 1 740 -11 6 1351 686 245 14 14 chr13 100402327 100402468 -19881844 + RSINE1 SINE B4 3 143 -22 6 1351 1062 347 43 14 chr13 100402547 100402968 -19881344 - LTR16B1 LTR ERVL -45 435 3 6 1351 450 316 86 133 chr13 100403138 100403786 -19880526 + RMER20B LTR ERVK 1 681 -227 6 1351 307 330 59 40 chr13 100403774 100403875 -19880437 + RMER20B LTR ERVK 494 596 -31 6 1351 3368 23 30 0 chr13 100405483 100405882 -19878430 + IAPLTR2a LTR ERVK 1 411 0 6 1351 3172 56 2 15 chr13 100406597 100406871 -19877441 + MTA_Mm LTR MaLR 1 274 -122 6 1351 3498 25 5 0 chr13 100406871 100407265 -19877047 + MTA_Mm LTR MaLR 1 396 0 6 1351 3172 56 2 15 chr13 100407265 100407391 -19876921 + MTA_Mm LTR MaLR 275 396 0 6 1351 346 308 33 0 chr13 100407554 100407645 -19876667 - MLT1A LTR MaLR -277 97 4 6 1351 260 275 48 61 chr13 100407968 100408115 -19876197 + L1M4b LINE L1 1339 1483 -5851 6 1351 365 290 23 31 chr13 100408172 100408300 -19876012 - L1MC3 LINE L1 -1122 6663 6537 6 1351 278 188 0 0 chr13 100408331 100408379 -19875933 - PB1D10 SINE Alu 0 117 70 6 1351 823 215 132 56 chr13 100408379 100408630 -19875682 - MTD-int LTR MaLR -988 270 1 6 1351 805 225 185 84 chr13 100408632 100409011 -19875301 - MTD LTR MaLR -2 417 1 6 1351 371 343 109 31 chr13 100409012 100409390 -19874922 + L1M4b LINE L1 1656 2105 -4903 6 1351 234 308 65 43 chr13 100409453 100409592 -19874720 + L1M4b LINE L1 2349 2490 -4612 6 1351 3288 186 15 6 chr13 100409645 100409906 -19874406 - RLTR40 LTR ERVK -6 811 565 6 1351 204 97 0 0 chr13 100409906 100409937 -19874375 + (TG)n Simple_repeat Simple_repeat 2 32 0 6 1351 3288 161 45 31 chr13 100409937 100410532 -19873780 - RLTR40 LTR ERVK -211 606 1 6 1351 569 299 88 80 chr13 100410592 100410843 -19873469 + B4A SINE B4 32 284 -8 6 1351 245 276 50 50 chr13 100410815 100410895 -19873417 + B3 SINE B2 127 206 -10 6 1351 196 342 78 9 chr13 100413055 100413170 -19871142 - L2a LINE L2 -17 3409 3287 6 1351 275 271 0 0 chr13 100413321 100413380 -19870932 + polypurine Low_complexity Low_complexity 2 60 0 6 1351 628 149 9 0 chr13 100413416 100413641 -19870671 + (TG)n Simple_repeat Simple_repeat 1 227 0 6 1351 495 212 40 26 chr13 100413647 100413768 -19870544 + ID_B1 SINE B4 2 127 -165 6 1351 191 61 30 0 chr13 100415153 100415186 -19869126 + (TTTTTG)n Simple_repeat Simple_repeat 4 37 0 6 1351 423 0 0 0 chr13 100415290 100415337 -19868975 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1351 533 306 75 0 chr13 100415934 100416081 -19868231 + ID_B1 SINE B4 2 159 -65 6 1351 490 300 167 32 chr13 100416154 100416596 -19867716 + Lx9 LINE L1 6920 7420 -224 6 1351 243 0 0 0 chr13 100416621 100416648 -19867664 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1351 4712 191 66 42 chr13 100416778 100418318 -19865994 + RMER1A Other Other 1 1015 -15 6 1351 369 0 0 0 chr13 100418323 100418364 -19865948 + (TA)n Simple_repeat Simple_repeat 2 42 0 6 1351 410 268 21 0 chr13 100418419 100418516 -19865796 + ID_B1 SINE B4 122 220 -4 6 1351 318 81 31 31 chr13 100418558 100418622 -19865690 + (GGAGA)n Simple_repeat Simple_repeat 5 68 0 6 1351 249 303 55 22 chr13 100420194 100420285 -19864027 - MamRep1161 DNA TcMar -857 100 7 6 1351 246 286 0 0 chr13 100420980 100421036 -19863276 + ID_B1 SINE B4 81 136 -88 6 1351 626 0 14 0 chr13 100421036 100421110 -19863202 + (TAGA)n Simple_repeat Simple_repeat 2 76 0 6 1351 218 176 27 0 chr13 100421116 100421190 -19863122 + (CAGAGA)n Simple_repeat Simple_repeat 3 78 0 6 1351 240 235 0 19 chr13 100421286 100421338 -19862974 - L2c LINE L2 0 3387 3337 6 1351 522 0 0 0 chr13 100422228 100422286 -19862026 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1351 743 303 111 53 chr13 100422988 100423329 -19860983 + MLT1A0 LTR MaLR 3 363 -2 6 1351 2392 133 16 8 chr13 100424241 100424605 -19859707 + ORR1B2 LTR MaLR 1 367 0 6 1351 1640 157 52 37 chr13 100424894 100424983 -19859329 + RMER17C LTR ERVK 1 89 -321 7 1351 423 0 0 0 chr13 100424983 100425030 -19859282 + (TC)n Simple_repeat Simple_repeat 2 48 0 7 1351 1640 157 52 37 chr13 100425030 100425344 -19858968 + RMER17C LTR ERVK 90 410 0 7 1351 338 381 48 0 chr13 100426516 100426726 -19857586 + MERVL-int LTR ERVL 4182 4401 -1084 7 1351 1252 254 25 0 chr13 100427293 100427569 -19856743 + B4 SINE B4 10 292 0 7 1351 565 349 46 33 chr13 100427776 100427908 -19856404 + LTR16A LTR ERVL 53 179 -272 7 1351 1201 144 119 0 chr13 100427908 100428110 -19856202 + URR1A DNA MER1_type 1 226 0 7 1351 565 349 46 33 chr13 100428110 100428279 -19856033 + LTR16A LTR ERVL 180 358 -93 7 1351 313 380 57 6 chr13 100428413 100428572 -19855740 - L1M5 LINE L1 -605 5557 5391 7 1351 326 261 43 56 chr13 100428597 100428759 -19855553 - L1M5 LINE L1 -815 5331 5172 7 1351 2216 248 24 35 chr13 100428959 100429578 -19854734 + Lx8 LINE L1 6724 7335 -138 7 1351 3531 67 12 7 chr13 100429574 100430044 -19854268 + L1Md_F2 LINE L1 5127 5586 -297 7 1351 7590 58 17 29 chr13 100430045 100431043 -19853269 + L1Md_F2 LINE L1 5588 6573 -9 7 1351 639 264 51 20 chr13 100431061 100431258 -19853054 - L1MD2 LINE L1 -311 6048 5846 7 1351 267 31 0 0 chr13 100431258 100431290 -19853022 + (TC)n Simple_repeat Simple_repeat 2 33 0 7 1351 464 0 18 0 chr13 100431290 100431345 -19852967 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1351 2119 85 6 64 chr13 100431346 100431660 -19852652 - ORR1A3 LTR MaLR -29 297 2 7 1351 360 0 0 0 chr13 100431662 100431702 -19852610 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1351 896 309 24 24 chr13 100431707 100431959 -19852353 - B4A SINE B4 -27 265 14 7 1351 291 254 215 58 chr13 100432723 100432844 -19851468 + B1F SINE Alu 1 140 -9 7 1351 252 352 97 57 chr13 100433130 100433461 -19850851 + L2b LINE L2 1951 2294 -1125 7 1351 194 227 144 68 chr13 100433736 100433854 -19850458 + L2b LINE L2 2368 2494 -925 7 1351 1124 278 130 18 chr13 100433953 100434283 -19850029 - MTEb LTR MaLR -12 367 1 7 1351 225 0 0 0 chr13 100434392 100434417 -19849895 + (TCG)n Simple_repeat Simple_repeat 1 25 0 7 1351 315 0 0 0 chr13 100434417 100434452 -19849860 + (TCC)n Simple_repeat Simple_repeat 2 36 0 7 1351 199 296 44 83 chr13 100434560 100434721 -19849591 + L2b LINE L2 2913 3074 -352 7 1351 279 277 50 60 chr13 100436209 100436309 -19848003 + L2b LINE L2 3276 3374 -1 7 1351 22 0 0 0 chr13 100436525 100436547 -19847765 + AT_rich Low_complexity Low_complexity 1 22 0 7 1351 28 29 0 0 chr13 100436644 100436679 -19847633 + AT_rich Low_complexity Low_complexity 1 35 0 7 1351 1064 126 0 6 chr13 100437485 100437660 -19846652 + (TTC)n Simple_repeat Simple_repeat 1 174 0 7 1351 305 181 21 21 chr13 100437665 100437761 -19846551 + CT-rich Low_complexity Low_complexity 2 97 0 7 1351 297 0 0 0 chr13 100438540 100438573 -19845739 + (TC)n Simple_repeat Simple_repeat 2 34 0 7 1351 378 0 0 0 chr13 100438573 100438614 -19845698 + (TG)n Simple_repeat Simple_repeat 1 42 0 7 1351 270 0 0 0 chr13 100439452 100439482 -19844830 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 7 1351 835 107 30 15 chr13 100439483 100439616 -19844696 - B1_Mur3 SINE Alu -13 136 2 7 1351 492 18 0 0 chr13 100441561 100441618 -19842694 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1351 745 199 0 0 chr13 100442134 100442265 -19842047 + ID_B1 SINE B4 80 210 -14 7 1351 331 314 148 55 chr13 100442277 100442459 -19841853 + LTR84b LTR ERVL 442 640 -117 7 1351 23 0 0 0 chr13 100443028 100443051 -19841261 + AT_rich Low_complexity Low_complexity 1 23 0 7 1351 428 314 150 12 chr13 100444045 100444464 -19839848 - L1MB8 LINE L1 -114 6064 5588 7 1351 221 374 0 0 chr13 100444467 100444550 -19839762 - RSINE1 SINE B4 -58 107 25 7 1351 218 82 61 76 chr13 100445857 100445871 -19838441 + A-rich Low_complexity Low_complexity 2 15 0 7 1351 198 0 0 0 chr13 100445871 100445893 -19838419 + (CAA)n Simple_repeat Simple_repeat 2 23 0 7 1351 218 82 61 76 chr13 100445893 100445944 -19838368 + A-rich Low_complexity Low_complexity 16 66 0 7 1351 862 272 98 38 chr13 100446798 100447218 -19837094 + L1MD3 LINE L1 6883 7327 -668 7 1351 2292 113 59 29 chr13 100447248 100447657 -19836655 + RLTR23 LTR ERV1 10 430 0 7 1351 243 247 90 13 chr13 100447694 100447772 -19836540 + L1MD3 LINE L1 7414 7497 -498 7 1351 449 262 140 60 chr13 100447804 100447954 -19836358 - RSINE1 SINE B4 0 165 4 7 1351 855 314 83 15 chr13 100447980 100448440 -19835872 + L1MD3 LINE L1 7496 7986 -9 7 1351 331 255 52 52 chr13 100448461 100448577 -19835735 + L1MEf LINE L1 6 121 -6079 7 1351 216 297 0 15 chr13 100448930 100448995 -19835317 + B1F2 SINE Alu 1 64 -85 7 1351 853 181 36 167 chr13 100449105 100449357 -19834955 + URR1A DNA MER1_type 1 219 -7 7 1351 376 255 57 0 chr13 100451064 100451170 -19833142 - ORR1D1 LTR MaLR -8 362 251 7 1351 220 320 12 43 chr13 100451290 100451453 -19832859 + GA-rich Low_complexity Low_complexity 7 164 0 7 1351 731 240 46 113 chr13 100451487 100451769 -19832543 - ORR1D1 LTR MaLR -106 268 6 7 1351 1232 61 0 0 chr13 100452146 100452293 -19832019 + B1_Mus1 SINE Alu 2 148 0 7 1351 183 42 0 0 chr13 100452293 100452317 -19831995 + (CAA)n Simple_repeat Simple_repeat 3 26 0 7 1351 2185 163 70 10 chr13 100452406 100452803 -19831509 - MTC LTR MaLR 0 421 1 7 1351 426 218 0 0 chr13 100455174 100455252 -19829060 - ID4 SINE ID -4 79 2 7 1351 22 56 0 0 chr13 100455299 100455335 -19828977 + AT_rich Low_complexity Low_complexity 1 36 0 7 1351 402 115 0 0 chr13 100455854 100455915 -19828397 + (TA)n Simple_repeat Simple_repeat 2 62 0 7 1351 386 237 42 73 chr13 100456015 100456220 -19828092 - L1MA4A LINE L1 -280 6020 5817 7 1351 270 0 0 0 chr13 100456220 100456250 -19828062 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1351 1343 97 16 0 chr13 100456275 100456461 -19827851 + B2_Mm2 SINE B2 1 189 -6 7 1351 2421 193 50 139 chr13 100456469 100457284 -19827028 - RMER1B Other Other -9 1057 1 7 1351 267 282 103 0 chr13 100457346 100457424 -19826888 - RMER1A Other Other -930 100 15 7 1351 402 274 43 17 chr13 100457408 100457523 -19826789 - RMER1B Other Other -651 415 298 7 1351 20065 60 12 4 chr13 100457523 100460418 -19823894 - L1VL4 LINE L1 0 3559 640 7 1351 513 132 33 0 chr13 100460602 100460691 -19823621 - URR1B DNA MER1_type -4 221 130 7 1351 2183 166 27 38 chr13 100460691 100461218 -19823094 - RLTR31A_Mm LTR ERVK 0 561 1 7 1351 3353 92 2 0 chr13 100461338 100461773 -19822539 - L1VL4 LINE L1 -5668 634 199 7 1351 1270 207 28 0 chr13 100461797 100462014 -19822298 - RMER1B Other Other -797 269 47 7 1351 1340 258 92 42 chr13 100462658 100463201 -19821111 + RLTR20A2 LTR ERVK 9 578 0 7 1351 373 267 0 0 chr13 100463205 100463291 -19821021 - B1_Mur2 SINE Alu -26 123 38 7 1351 692 299 91 42 chr13 100463321 100463861 -19820451 - L1MA4A LINE L1 -815 5485 4862 7 1351 1685 148 47 44 chr13 100463919 100464258 -19820054 - ORR1B1 LTR MaLR -8 386 47 7 1351 1505 264 62 56 chr13 100464297 100464972 -19819340 + L1M2 LINE L1 4099 4777 -1366 7 1351 1325 187 0 0 chr13 100465512 100465737 -19818575 - URR1B DNA MER1_type 0 225 1 7 1351 233 267 71 56 chr13 100466703 100466901 -19817411 - L3 LINE CR1 -1688 2801 2601 7 1351 2322 171 9 30 chr13 100467413 100467932 -19816380 - RLTR31A_Mm LTR ERVK 0 692 1 7 1351 783 274 14 28 chr13 100468143 100468361 -19815951 - B3 SINE B2 0 216 2 7 1351 198 167 0 0 chr13 100468831 100468867 -19815445 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1351 506 278 62 7 chr13 100468984 100469129 -19815183 - MTEa LTR MaLR -98 281 129 7 1351 921 118 25 6 chr13 100469127 100469289 -19815023 + URR1A DNA MER1_type 62 226 0 7 1351 439 323 87 20 chr13 100469289 100469523 -19814789 - MLT1A0 LTR MaLR -110 255 5 7 1351 740 284 103 19 chr13 100470131 100470393 -19813919 - MTEb LTR MaLR -4 375 92 7 1351 486 0 0 0 chr13 100470421 100470475 -19813837 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1351 947 245 128 10 chr13 100470530 100470843 -19813469 + MTEb LTR MaLR 2 351 -28 7 1351 770 242 76 40 chr13 100471053 100471361 -19812951 - RLTR11A2 LTR ERVK -122 331 8 7 1351 187 318 16 16 chr13 100471437 100471501 -19812811 - MIRm SINE MIR -200 76 13 7 1351 2136 85 64 22 chr13 100472135 100472449 -19811863 + ORR1A2 LTR MaLR 1 327 0 7 1351 258 105 0 0 chr13 100472973 100473011 -19811301 + (TG)n Simple_repeat Simple_repeat 2 39 0 7 1351 3382 194 59 90 chr13 100473210 100474129 -19810183 - RMER19B LTR ERVK -12 890 1 7 1351 653 300 67 59 chr13 100474273 100474528 -19809784 - B4A SINE B4 -35 257 1 7 1351 893 118 0 0 chr13 100474838 100474973 -19809339 - B1_Mus2 SINE Alu 0 147 13 7 1351 357 226 278 0 chr13 100474998 100475113 -19809199 - ID_B1 SINE B4 0 224 78 7 1351 1244 274 83 24 chr13 100475127 100475632 -19808680 - L1M5 LINE L1 -372 5807 5273 7 1351 468 0 0 0 chr13 100475853 100475905 -19808407 + (TG)n Simple_repeat Simple_repeat 1 52 0 7 1351 195 42 0 0 chr13 100475910 100475934 -19808378 + (GA)n Simple_repeat Simple_repeat 1 24 0 7 1351 402 270 60 131 chr13 100475985 100476283 -19808029 - B4 SINE B4 -14 278 2 7 1351 487 323 178 13 chr13 100476392 100476775 -19807537 - MER21B LTR ERV1 -52 811 366 7 1351 600 247 164 13 chr13 100476782 100477008 -19807304 + L1MA5 LINE L1 4516 4775 -1368 7 1351 1873 127 22 25 chr13 100477031 100477353 -19806959 + ORR1A4 LTR MaLR 1 321 -8 7 1351 580 233 224 27 chr13 100477369 100477700 -19806612 + L1MA5 LINE L1 4823 5218 -925 7 1351 231 111 0 0 chr13 100477700 100477736 -19806576 + tRNA-Thr-ACA tRNA tRNA 1 36 -40 7 1351 748 292 79 33 chr13 100477737 100478267 -19806045 + L1MA5 LINE L1 5209 5756 -544 7 1351 1615 340 58 33 chr13 100478385 100478482 -19805830 - Lx9 LINE L1 -60 7413 7329 7 1351 288 0 0 0 chr13 100478482 100478514 -19805798 + (CA)n Simple_repeat Simple_repeat 2 33 0 7 1351 2863 261 57 30 chr13 100478514 100479319 -19804993 - Lx9 LINE L1 -187 7457 6489 7 1351 4474 16 0 2 chr13 100479327 100479821 -19804491 + MT2_Mm LTR ERVL 1 493 0 7 1351 48366 16 6 0 chr13 100479821 100485147 -19799165 + MERVL-int LTR ERVL 1 5360 -125 7 1351 362 167 46 35 chr13 100485147 100485234 -19799078 + ORR1A3-int LTR MaLR 553 640 -1323 7 1351 321 0 0 0 chr13 100485234 100485272 -19799040 + MERVL-int LTR ERVL 5448 5485 0 7 1351 4487 14 0 2 chr13 100485272 100485766 -19798546 + MT2_Mm LTR ERVL 1 493 0 7 1351 810 298 35 8 chr13 100485766 100486023 -19798289 - Lx9 LINE L1 -1032 6612 6349 7 1351 261 0 0 0 chr13 100486025 100486054 -19798258 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1351 1025 126 157 0 chr13 100486104 100486295 -19798017 - URR1A DNA MER1_type 0 226 6 7 1351 249 348 44 7 chr13 100486498 100486634 -19797678 - L1M2 LINE L1 -1172 4971 4831 7 1351 495 288 8 15 chr13 100486727 100486861 -19797451 + B1_Mur2 SINE Alu 7 139 -10 7 1351 752 319 45 0 chr13 100486867 100487181 -19797131 + L1MA5 LINE L1 5939 6266 -34 7 1351 351 206 155 10 chr13 100487571 100487674 -19796638 - ORR1D2 LTR MaLR -250 120 3 8 1351 440 81 0 13 chr13 100487845 100487920 -19796392 + (TC)n Simple_repeat Simple_repeat 2 75 0 8 1351 270 0 0 0 chr13 100487920 100487950 -19796362 + (CA)n Simple_repeat Simple_repeat 1 30 0 8 1351 495 0 0 0 chr13 100487950 100488004 -19796308 + (GA)n Simple_repeat Simple_repeat 2 56 0 8 1351 359 266 93 16 chr13 100488320 100488546 -19795766 - L1M4b LINE L1 -2925 4081 3827 8 1351 228 179 9 28 chr13 100488560 100488669 -19795643 + (TTTG)n Simple_repeat Simple_repeat 2 108 0 8 1351 906 160 14 0 chr13 100488677 100488821 -19795491 - B1_Mus2 SINE Alu 0 147 2 8 1351 300 246 152 42 chr13 100489573 100489909 -19794403 - L1M4b LINE L1 -5139 1963 1386 8 1351 1007 69 14 0 chr13 100489910 100490054 -19794258 - B1_Mus1 SINE Alu 0 148 3 8 1351 626 237 20 64 chr13 100490215 100490418 -19793894 - B3A SINE B2 0 198 5 8 1351 257 328 39 31 chr13 100490424 100490553 -19793759 - MER5B DNA MER1_type -48 130 1 8 1351 832 337 0 75 chr13 100491732 100492024 -19792288 - B4 SINE B4 -22 270 1 8 1351 250 331 54 27 chr13 100492360 100492509 -19791803 + MLT1F1 LTR MaLR 389 541 -28 8 1351 192 77 0 0 chr13 100492861 100492887 -19791425 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 8 1351 463 228 26 17 chr13 100492970 100493086 -19791226 - PB1D10 SINE Alu 0 117 1 8 1351 340 321 59 81 chr13 100495137 100495459 -19788853 + MLT1J LTR MaLR 23 337 -175 8 1351 339 234 0 54 chr13 100496030 100496132 -19788180 + B4A SINE B4 2 93 -199 8 1351 443 18 0 18 chr13 100496810 100496867 -19787445 + (TC)n Simple_repeat Simple_repeat 2 57 0 8 1351 618 150 0 0 chr13 100496867 100496967 -19787345 - B1_Mus2 SINE Alu -5 142 43 8 1351 255 297 44 0 chr13 100496968 100497059 -19787253 - MIRb SINE MIR -99 169 75 8 1351 357 169 0 44 chr13 100497256 100497324 -19786988 + ID4 SINE ID 4 68 -15 8 1351 279 0 0 0 chr13 100497337 100497368 -19786944 + (CA)n Simple_repeat Simple_repeat 1 31 0 8 1351 21 0 0 0 chr13 100498069 100498090 -19786222 + AT_rich Low_complexity Low_complexity 1 21 0 8 1351 23 33 0 0 chr13 100498114 100498144 -19786168 + AT_rich Low_complexity Low_complexity 1 30 0 8 1351 667 92 18 0 chr13 100498329 100498438 -19785874 + (TG)n Simple_repeat Simple_repeat 1 111 0 8 1351 243 303 53 0 chr13 100498470 100498546 -19785766 - B4 SINE B4 -131 161 82 8 1351 299 294 11 45 chr13 100498574 100498663 -19785649 - B4A SINE B4 -205 87 2 8 1351 347 308 59 21 chr13 100500132 100500246 -19784066 - MuLV-int LTR ERV1 -174 7432 7311 1 1351 378 0 0 0 chr13 100500246 100500288 -19784024 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1351 347 308 59 21 chr13 100500288 100500359 -19783953 - MuLV-int LTR ERV1 -296 7310 7241 1 1351 257 309 46 9 chr13 100500337 100500445 -19783867 - RLTR4_MM-int LTR ERV1 -308 5009 4898 3 1351 1560 339 52 42 chr13 100501001 100502235 -19782077 - RLTR4_MM-int LTR ERV1 -3657 3944 2699 3 1351 456 333 12 55 chr13 100502642 100502859 -19781453 - RLTR4_MM-int LTR ERV1 -5462 2316 2039 3 1351 534 339 64 49 chr13 100503155 100503561 -19780751 - RLTR4_MM-int LTR ERV1 -5999 1607 1156 3 1351 267 295 56 21 chr13 100503989 100504131 -19780181 - RLTR4_MM-int LTR ERV1 -6917 861 715 3 1351 1262 135 87 0 chr13 100505737 100505944 -19778368 - URR1B DNA MER1_type 0 225 1 4 1351 415 294 16 8 chr13 100506007 100506134 -19778178 - MIRb SINE MIR -116 152 25 5 1351 218 184 0 0 chr13 100506320 100506358 -19777954 + CT-rich Low_complexity Low_complexity 4 41 0 6 1351 472 239 0 9 chr13 100506595 100506705 -19777607 - PB1D10 SINE Alu -7 110 2 7 1351 2043 209 48 32 chr13 100507773 100508276 -19776036 + RMER20A LTR ERVK 2 512 -4 8 1351 480 246 66 22 chr13 100508717 100508854 -19775458 - ID_B1 SINE B4 -6 218 76 9 1351 321 26 0 0 chr13 100510218 100510256 -19774056 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 1 1351 1840 143 10 116 chr13 100510386 100510774 -19773538 + ORR1B1 LTR MaLR 47 393 -1 1 1351 427 318 96 23 chr13 100510794 100511013 -19773299 + Lx8 LINE L1 6984 7218 -255 1 1351 658 335 83 34 chr13 100511361 100511747 -19772565 + MLT1J LTR MaLR 100 504 -8 1 1351 285 221 58 11 chr13 100511751 100511838 -19772474 + L2a LINE L2 3248 3338 -88 1 1351 900 289 99 24 chr13 100512404 100512827 -19771485 + L1MA5 LINE L1 5809 6295 -5 1 1351 315 0 0 0 chr13 100513300 100513335 -19770977 + (TC)n Simple_repeat Simple_repeat 2 36 0 1 1351 351 0 0 0 chr13 100513335 100513373 -19770939 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1351 381 282 53 0 chr13 100514428 100514559 -19769753 - L1MA5 LINE L1 -13 6287 6150 1 1351 1204 41 0 7 chr13 100516128 100516275 -19768037 + B1_Mm SINE Alu 2 147 0 1 1351 3308 145 158 0 chr13 100516826 100517413 -19766899 + RMER1B Other Other 387 1066 0 2 1351 605 282 122 29 chr13 100517866 100518077 -19766235 + Tigger5 DNA MER2_type 2135 2369 -37 2 1351 263 28 28 0 chr13 100518077 100518113 -19766199 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 2 1351 605 282 122 29 chr13 100518113 100518146 -19766166 + Tigger5 DNA MER2_type 2370 2402 -4 2 1351 1980 132 31 9 chr13 100518870 100519220 -19765092 + ORR1B2 LTR MaLR 1 358 -9 2 1351 249 128 0 0 chr13 100519220 100519267 -19765045 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1351 285 198 85 12 chr13 100519396 100519478 -19764834 - ERVL-E-int LTR ERVL -1333 4334 4247 2 1351 228 340 50 19 chr13 100519650 100519809 -19764503 + LTR16A LTR ERVL 284 447 -4 2 1351 204 40 0 0 chr13 100520441 100520466 -19763846 + (TG)n Simple_repeat Simple_repeat 1 25 0 2 1351 369 136 0 0 chr13 100520466 100520532 -19763780 + (GA)n Simple_repeat Simple_repeat 1 66 0 2 1351 1209 62 0 0 chr13 100520623 100520768 -19763544 - B1_Mus2 SINE Alu 0 147 3 2 1351 307 303 18 9 chr13 100520901 100521011 -19763301 + ERVL-E-int LTR ERVL 4229 4339 -1328 3 1351 329 256 16 31 chr13 100521180 100521309 -19763003 - Charlie5 DNA MER1_type -2497 127 1 3 1351 308 279 12 25 chr13 100521499 100521580 -19762732 + G-rich Low_complexity Low_complexity 5 84 0 3 1351 407 249 106 98 chr13 100521731 100521990 -19762322 + B4A SINE B4 2 275 -17 3 1351 894 246 0 0 chr13 100522307 100522587 -19761725 + CT-rich Low_complexity Low_complexity 1 280 0 3 1351 948 169 0 0 chr13 100522610 100522788 -19761524 + CT-rich Low_complexity Low_complexity 2 179 0 3 1351 604 313 30 5 chr13 100523536 100523735 -19760577 - ID_B1 SINE B4 -17 207 4 3 1351 687 225 114 57 chr13 100523771 100523964 -19760348 - B3 SINE B2 -12 204 1 3 1351 307 345 65 30 chr13 100524973 100525203 -19759109 - L1M5 LINE L1 -363 5799 5562 3 1351 1023 211 14 5 chr13 100525360 100525574 -19758738 - B3 SINE B2 0 216 1 3 1351 800 186 7 27 chr13 100525607 100525756 -19758556 + B1_Mur3 SINE Alu 2 147 -2 3 1351 1202 301 110 63 chr13 100525817 100526789 -19757523 - L1M5 LINE L1 -880 5266 4249 3 1351 241 252 66 66 chr13 100526869 100526941 -19757371 - L1M5 LINE L1 -3555 2591 2514 3 1351 702 82 0 0 chr13 100526941 100527039 -19757273 + (CAT)n Simple_repeat Simple_repeat 3 100 0 4 1351 393 212 12 0 chr13 100527043 100527123 -19757189 - ID4 SINE ID -2 81 1 4 1351 241 252 66 66 chr13 100527123 100527151 -19757161 - L1M5 LINE L1 -3633 2513 2486 3 1351 317 162 147 13 chr13 100527537 100527560 -19756752 - Lx5 LINE L1 -984 6066 6044 4 1351 576 0 0 0 chr13 100527560 100527624 -19756688 + (TCCC)n Simple_repeat Simple_repeat 2 65 0 4 1351 317 162 147 13 chr13 100527624 100527675 -19756637 - Lx5 LINE L1 -1007 6043 5983 4 1351 1525 126 110 0 chr13 100527673 100527928 -19756384 + Lx5 LINE L1 6272 6554 -496 4 1351 2007 170 24 32 chr13 100527928 100528299 -19756013 + Lx5 LINE L1 6680 7047 -3 4 1351 839 285 39 20 chr13 100528435 100528689 -19755623 + B4A SINE B4 1 259 -33 4 1351 908 309 75 18 chr13 100529184 100529636 -19754676 + L1MC LINE L1 5292 5769 -2113 4 1351 396 0 0 0 chr13 100529690 100529734 -19754578 + (TG)n Simple_repeat Simple_repeat 1 44 0 4 1351 317 265 19 10 chr13 100529738 100529841 -19754471 - B3A SINE B2 -94 104 1 4 1351 292 237 47 0 chr13 100530527 100530626 -19753686 - MIR SINE MIR -106 162 56 4 1351 592 278 179 62 chr13 100530718 100531093 -19753219 + MTD LTR MaLR 1 419 -2 5 1351 195 100 0 0 chr13 100531736 100531766 -19752546 + (GA)n Simple_repeat Simple_repeat 2 31 0 5 1352 1687 21 5 0 chr13 100532344 100532536 -19751776 + B2_Mm1t SINE B2 1 193 0 5 1352 466 281 149 50 chr13 100533006 100533268 -19751044 + MLT1E2 LTR MaLR 18 305 -322 5 1352 1732 199 78 21 chr13 100533338 100533760 -19750552 + RLTR41 LTR ERV1 1 446 0 5 1352 382 286 118 45 chr13 100533777 100533997 -19750315 + MLT1E2 LTR MaLR 389 624 0 5 1352 243 311 60 8 chr13 100535883 100536014 -19748298 - MIR SINE MIR -73 195 57 5 1352 467 335 249 21 chr13 100538417 100538994 -19745318 + L1MEc LINE L1 38 745 -5655 5 1352 315 244 144 10 chr13 100539156 100539351 -19744961 + L1MEc LINE L1 1271 1491 -4909 5 1352 248 303 46 0 chr13 100539754 100539863 -19744449 + L1MB5 LINE L1 6018 6131 -43 5 1352 655 262 20 13 chr13 100540380 100540531 -19743781 - RSINE1 SINE B4 -11 154 3 5 1352 364 242 63 0 chr13 100540890 100540985 -19743327 + PB1D10 SINE Alu 9 109 -8 5 1352 282 206 0 0 chr13 100540985 100541053 -19743259 + GA-rich Low_complexity Low_complexity 1 68 0 6 1352 243 228 38 45 chr13 100541090 100541223 -19743089 + L1MEc LINE L1 2234 2365 -4035 5 1352 1184 62 0 0 chr13 100541223 100541367 -19742945 + B1_Mus2 SINE Alu 2 145 -2 6 1352 213 65 0 0 chr13 100541367 100541398 -19742914 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1352 2233 128 75 72 chr13 100541578 100542007 -19742305 + RLTR23 LTR ERV1 1 430 0 6 1352 237 220 68 0 chr13 100542134 100542193 -19742119 + MLT1G3 LTR MaLR 295 357 -238 6 1352 1406 199 133 18 chr13 100542313 100542650 -19741662 + MTD LTR MaLR 36 411 -8 6 1352 2773 88 143 4 chr13 100542718 100543185 -19741127 - RLTR47_MM LTR ERV1 0 532 1 6 1352 249 330 41 25 chr13 100543800 100543921 -19740391 + MER45B DNA Tip100 292 414 -626 6 1352 4579 52 0 0 chr13 100543949 100544502 -19739810 - L1Md_F2 LINE L1 0 5883 5331 6 1352 5243 67 0 18 chr13 100544502 100545185 -19739127 + L1Md_F2 LINE L1 5907 6577 -5 6 1352 2609 121 31 16 chr13 100545259 100545647 -19738665 - ORR1B1 LTR MaLR 0 394 1 6 1352 924 122 0 68 chr13 100545761 100545998 -19738314 + (CAGAGA)n Simple_repeat Simple_repeat 1 220 0 7 1352 1089 151 0 22 chr13 100546020 100546203 -19738109 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 7 1352 463 259 0 0 chr13 100546206 100546314 -19737998 + B1_Mur1 SINE Alu 42 149 0 7 1352 732 122 0 35 chr13 100546318 100546462 -19737850 + GA-rich Low_complexity Low_complexity 4 142 0 7 1352 1319 280 45 45 chr13 100546462 100546474 -19737838 + MER45B DNA Tip100 527 538 -502 6 1352 219 36 0 0 chr13 100546474 100546502 -19737810 + (CAAGG)n Simple_repeat Simple_repeat 2 29 0 7 1352 1319 280 45 45 chr13 100546502 100547001 -19737311 + MER45B DNA Tip100 539 1038 -2 6 1352 529 230 97 0 chr13 100547208 100547321 -19736991 + B1_Mur1 SINE Alu 2 125 -24 7 1352 396 0 0 0 chr13 100547607 100547651 -19736661 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1352 476 59 15 0 chr13 100548459 100548527 -19735785 + (TA)n Simple_repeat Simple_repeat 1 69 0 7 1352 985 277 156 3 chr13 100548554 100548945 -19735367 - Lx9 LINE L1 -116 7528 7078 7 1352 263 348 0 0 chr13 100548946 100549035 -19735277 + Lx9 LINE L1 6861 6949 -695 7 1352 366 290 42 81 chr13 100549309 100549545 -19734767 + MER2 DNA MER2_type 87 313 -32 7 1352 266 296 0 0 chr13 100549818 100549899 -19734413 + L1MB2 LINE L1 6089 6169 -2 8 1352 784 134 227 113 chr13 100552008 100552202 -19732110 + B3 SINE B2 1 216 0 8 1352 394 159 294 0 chr13 100552213 100552339 -19731973 + B2_Mm2 SINE B2 2 164 -31 8 1352 242 250 34 45 chr13 100552458 100552546 -19731766 + L1MC2 LINE L1 6252 6338 -6 8 1352 731 352 84 19 chr13 100553299 100553670 -19730642 - LTR33B LTR ERVL -58 445 51 8 1352 860 329 55 16 chr13 100553721 100554157 -19730155 + MLT1C LTR MaLR 9 461 -6 8 1352 419 0 0 19 chr13 100554188 100554240 -19730072 + (CA)n Simple_repeat Simple_repeat 1 51 0 8 1352 2814 72 3 3 chr13 100556191 100556565 -19727747 + L1_Mus4 LINE L1 6257 6630 -6 8 1352 454 217 192 0 chr13 100556899 100557019 -19727293 - B1F SINE Alu -2 147 5 8 1352 282 340 61 7 chr13 100557332 100557480 -19726832 - MER99 DNA hAT? -674 157 2 8 1352 765 167 0 0 chr13 100557553 100557727 -19726585 + CT-rich Low_complexity Low_complexity 1 174 0 9 1352 209 158 36 12 chr13 100557973 100558056 -19726256 + GA-rich Low_complexity Low_complexity 1 85 0 9 1352 5732 37 0 1 chr13 100558457 100559131 -19725181 - L1Md_T LINE L1 0 6582 5910 9 1352 306 67 0 0 chr13 100559255 100559300 -19725012 + (TG)n Simple_repeat Simple_repeat 1 45 0 9 1352 652 235 8 0 chr13 100559324 100559456 -19724856 - RSINE1 SINE B4 -22 143 11 9 1352 204 40 0 0 chr13 100559457 100559482 -19724830 + (CCCCCA)n Simple_repeat Simple_repeat 3 27 0 9 1352 730 270 29 12 chr13 100559496 100559736 -19724576 - L1MA7 LINE L1 -5 6286 6043 9 1352 204 65 64 21 chr13 100560644 100560691 -19723621 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 9 1352 216 122 0 0 chr13 100560902 100560943 -19723369 + (CA)n Simple_repeat Simple_repeat 2 42 0 9 1352 420 20 0 0 chr13 100560982 100561031 -19723281 + (TG)n Simple_repeat Simple_repeat 1 49 0 9 1352 204 97 0 0 chr13 100561043 100561074 -19723238 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 1 1352 350 260 31 15 chr13 100561256 100561384 -19722928 - MER34A LTR ERV1 -4 567 415 1 1352 396 0 0 0 chr13 100561496 100561540 -19722772 + (TG)n Simple_repeat Simple_repeat 1 44 0 1 1352 540 42 0 0 chr13 100561540 100561611 -19722701 + (CAGAGA)n Simple_repeat Simple_repeat 2 72 0 1 1352 258 253 165 0 chr13 100562732 100562811 -19721501 - MER34A LTR ERV1 -460 111 20 1 1352 1386 246 60 27 chr13 100563084 100563565 -19720747 + RMER5 LTR ERV1 33 529 -5 1 1352 2623 158 29 77 chr13 100565431 100565987 -19718325 + RLTR24 LTR ERV1 1 529 0 1 1352 24 0 0 0 chr13 100566325 100566349 -19717963 + AT_rich Low_complexity Low_complexity 1 24 0 1 1352 328 308 14 28 chr13 100566906 100567054 -19717258 - MIR SINE MIR -88 180 40 1 1352 316 355 59 16 chr13 100567664 100567850 -19716462 + HERV16-int LTR ERVL 1999 2192 -2804 1 1352 293 314 161 24 chr13 100568229 100568477 -19715835 + LTR50 LTR ERVL 395 676 -119 1 1352 351 0 0 0 chr13 100568805 100568844 -19715468 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1352 292 283 11 0 chr13 100569080 100569172 -19715140 + RMER20B LTR ERVK 233 325 -302 1 1352 272 253 62 21 chr13 100569587 100569684 -19714628 + RMER20B LTR ERVK 319 419 -208 1 1352 389 231 19 19 chr13 100570015 100570121 -19714191 + RMER20B LTR ERVK 500 605 -22 1 1352 991 211 93 101 chr13 100570264 100570685 -19713627 + MT2A LTR ERVL 1 546 -55 1 1352 843 166 0 0 chr13 100570691 100570848 -19713464 + (TAGA)n Simple_repeat Simple_repeat 1 157 0 1 1352 294 167 0 0 chr13 100570849 100570897 -19713415 + Ricksha_c DNA MuDR 856 903 -1145 1 1352 208 0 30 30 chr13 100570913 100570946 -19713366 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1352 1485 255 10 29 chr13 100570951 100571334 -19712978 - Lx7 LINE L1 -396 7300 6925 1 1352 234 0 0 0 chr13 100571393 100571419 -19712893 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1352 901 197 52 26 chr13 100571443 100571636 -19712676 + B3A SINE B2 1 198 0 1 1352 1042 164 167 104 chr13 100571803 100571873 -19712439 - ORR1D1 LTR MaLR 0 374 312 1 1352 965 114 0 8 chr13 100571873 100572006 -19712306 + B1_Mus1 SINE Alu 2 133 -15 1 1352 1042 164 167 104 chr13 100572006 100572282 -19712030 - ORR1D1 LTR MaLR -63 311 6 1 1352 378 263 138 19 chr13 100572315 100572490 -19711822 + MLT1B LTR MaLR 196 390 0 1 1352 1783 194 21 59 chr13 100572570 100572782 -19711530 - ORR1D1 LTR MaLR 0 374 171 1 1352 1356 48 0 0 chr13 100572782 100573222 -19711090 + (TG)n Simple_repeat Simple_repeat 1 440 0 1 1352 1783 194 21 59 chr13 100573222 100573395 -19710917 - ORR1D1 LTR MaLR -204 170 2 1 1352 389 355 45 10 chr13 100574071 100574270 -19710042 + LTR16C LTR ERVL 140 345 -144 1 1352 180 184 0 0 chr13 100575576 100575625 -19708687 + G-rich Low_complexity Low_complexity 1 49 0 1 1352 291 248 222 34 chr13 100575983 100576100 -19708212 + RSINE1 SINE B4 3 141 -24 1 1352 312 83 0 0 chr13 100576100 100576148 -19708164 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1352 548 254 0 0 chr13 100576307 100576433 -19707879 - B4A SINE B4 -165 127 2 1 1352 24 0 0 0 chr13 100577087 100577111 -19707201 + GC_rich Low_complexity Low_complexity 1 24 0 1 1352 522 0 0 0 chr13 100578260 100578318 -19705994 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1352 638 115 0 0 chr13 100578318 100578414 -19705898 - B1_Mur4 SINE Alu -54 96 1 1 1352 763 281 64 0 chr13 100578909 100579112 -19705200 - ID_B1 SINE B4 -8 216 1 1 1352 1530 201 134 13 chr13 100579370 100579743 -19704569 - MTD LTR MaLR 0 419 2 1 1352 423 285 30 60 chr13 100579867 100580035 -19704277 + RSINE1 SINE B4 3 165 0 1 1352 2933 55 2 2 chr13 100580101 100580468 -19703844 + L1Md_F2 LINE L1 5246 5585 -298 1 1352 8715 29 0 0 chr13 100580469 100581465 -19702847 + L1Md_F2 LINE L1 5587 6582 0 1 1352 952 258 72 52 chr13 100581541 100581889 -19702423 - ORR1E LTR MaLR -4 355 1 1 1352 268 23 68 0 chr13 100582401 100582445 -19701867 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 1 1352 1210 41 0 33 chr13 100582499 100582651 -19701661 - B1_Mus1 SINE Alu 0 148 2 1 1352 194 273 0 0 chr13 100583722 100583777 -19700535 - MIRc SINE MIR -102 166 112 1 1352 273 294 60 53 chr13 100585600 100585733 -19698579 + L2b LINE L2 3242 3375 0 1 1352 747 108 0 0 chr13 100586448 100586559 -19697753 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 1 1352 732 215 71 57 chr13 100586575 100586787 -19697525 - B3 SINE B2 0 216 2 1 1352 1107 277 14 37 chr13 100587041 100587337 -19696975 + B4A SINE B4 2 290 -2 1 1352 2973 14 48 6 chr13 100588188 100588540 -19695772 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1352 5693 55 132 87 chr13 100588540 100589474 -19694838 + IAPEz-int LTR ERVK 8 983 -5498 1 1352 27856 21 1 1 chr13 100589458 100592555 -19691757 + IAPEz-int LTR ERVK 3384 6481 0 1 1352 2973 14 48 6 chr13 100592555 100592907 -19691405 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1352 599 152 9 0 chr13 100593258 100593370 -19690942 + GA-rich Low_complexity Low_complexity 2 114 0 1 1352 503 261 25 0 chr13 100593397 100593516 -19690796 + B1F SINE Alu 28 149 0 1 1352 513 0 0 0 chr13 100593592 100593649 -19690663 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1352 357 109 0 0 chr13 100593649 100593704 -19690608 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1352 34 0 0 0 chr13 100594126 100594160 -19690152 + AT_rich Low_complexity Low_complexity 1 34 0 1 1352 1189 177 25 21 chr13 100594651 100594893 -19689419 + RLTR20C LTR ERVK 1 243 -291 1 1352 269 188 282 43 chr13 100594872 100594930 -19689382 + RLTR20C LTR ERVK 378 434 -100 1 1352 303 93 0 0 chr13 100594930 100594973 -19689339 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1352 269 188 282 43 chr13 100594973 100595031 -19689281 + RLTR20C LTR ERVK 435 521 -13 1 1352 559 226 138 84 chr13 100595727 100595930 -19688382 + B3 SINE B2 2 215 -1 1 1352 237 374 0 0 chr13 100596267 100596366 -19687946 + MLT1E2 LTR MaLR 529 627 0 1 1352 2962 37 5 0 chr13 100596535 100596916 -19687396 - MTA_Mm LTR MaLR 0 396 14 1 1352 528 314 19 0 chr13 100596964 100597174 -19687138 + L1ME4a LINE L1 5615 5828 -296 1 1352 1260 91 6 33 chr13 100597180 100597337 -19686975 + B2_Mm2 SINE B2 1 157 -38 1 1352 279 0 0 0 chr13 100597337 100597368 -19686944 + (TAAAA)n Simple_repeat Simple_repeat 3 33 0 1 1352 1260 91 6 33 chr13 100597368 100597392 -19686920 + B2_Mm2 SINE B2 158 177 -18 1 1352 405 323 80 51 chr13 100597538 100597874 -19686438 + MLT1H LTR MaLR 58 403 -146 1 1352 762 310 87 42 chr13 100598106 100598587 -19685725 + L2 LINE L2 2353 2855 -564 1 1352 1934 212 29 19 chr13 100599720 100600133 -19684179 - MTD LTR MaLR -2 417 1 1 1352 1252 67 0 175 chr13 100600626 100600860 -19683452 + B2_Mm1a SINE B2 1 193 0 1 1352 317 299 66 114 chr13 100601642 100601808 -19682504 + RSINE1 SINE B4 6 163 -2 1 1352 210 171 0 0 chr13 100601809 100601844 -19682468 + (TAA)n Simple_repeat Simple_repeat 2 36 0 1 1352 24 32 0 0 chr13 100602959 100602990 -19681322 + AT_rich Low_complexity Low_complexity 1 31 0 1 1352 447 68 0 0 chr13 100603231 100603290 -19681022 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1352 2150 142 28 71 chr13 100603331 100603724 -19680588 + ORR1C1 LTR MaLR 3 378 0 1 1352 2183 84 26 72 chr13 100603904 100604249 -19680063 - ORR1A4 LTR MaLR 0 329 1 1 1352 1457 143 4 30 chr13 100604731 100604962 -19679350 + URR1B DNA MER1_type 1 225 0 1 1352 4314 148 85 34 chr13 100605021 100605883 -19678429 - RMER17A2 LTR ERVK 0 906 1 1 1352 1060 243 63 51 chr13 100606206 100606522 -19677790 - ORR1E LTR MaLR 0 359 40 1 1352 1022 285 58 21 chr13 100606974 100607300 -19677012 + MTE2b LTR MaLR 3 340 -39 1 1352 275 214 14 0 chr13 100608335 100608405 -19675907 + (TA)n Simple_repeat Simple_repeat 2 72 0 1 1352 273 272 21 32 chr13 100608697 100608792 -19675520 - MIRc SINE MIR -137 131 38 1 1352 628 254 85 27 chr13 100609891 100610179 -19674133 - L1MA4 LINE L1 -282 6021 5718 1 1352 569 203 205 15 chr13 100610178 100610383 -19673929 - Lx9 LINE L1 0 7644 7401 1 1352 1615 156 26 88 chr13 100610439 100610790 -19673522 - ORR1B1 LTR MaLR 0 394 66 1 1352 27 49 0 0 chr13 100611486 100611527 -19672785 + AT_rich Low_complexity Low_complexity 1 41 0 1 1352 1323 93 0 76 chr13 100612985 100613195 -19671117 - B2_Mm2 SINE B2 0 195 2 1 1352 321 96 53 27 chr13 100613675 100613750 -19670562 + (TCTCTG)n Simple_repeat Simple_repeat 2 78 0 1 1352 670 283 0 43 chr13 100613760 100613948 -19670364 - B3A SINE B2 -18 180 1 1 1352 1092 270 18 4 chr13 100614691 100614966 -19669346 - B4A SINE B4 -12 280 2 1 1352 201 105 53 0 chr13 100615006 100615044 -19669268 + T-rich Low_complexity Low_complexity 2 41 0 1 1352 249 215 78 97 chr13 100615096 100615199 -19669113 - MLT1A0 LTR MaLR -3 405 305 1 1352 256 235 24 12 chr13 100615318 100615400 -19668912 - MLT1A0 LTR MaLR -228 137 55 1 1352 796 192 13 0 chr13 100615714 100615865 -19668447 + B3 SINE B2 29 181 -35 1 1352 284 70 23 0 chr13 100615875 100615918 -19668394 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1352 3549 191 82 90 chr13 100615929 100616860 -19667452 + RMER1B Other Other 144 1066 0 1 1352 468 77 0 0 chr13 100618253 100618318 -19665994 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1352 703 186 0 0 chr13 100618393 100618522 -19665790 - B1_Mur2 SINE Alu -10 139 11 1 1352 415 300 9 9 chr13 100618849 100618960 -19665352 + RSINE1 SINE B4 55 165 0 1 1352 581 297 68 43 chr13 100619006 100619284 -19665028 + B4A SINE B4 2 286 -6 1 1352 369 198 47 0 chr13 100619465 100619551 -19664761 - B3A SINE B2 -105 93 4 1 1352 574 259 68 29 chr13 100620047 100620118 -19664194 + B3 SINE B2 2 81 -135 1 1352 315 0 0 0 chr13 100620118 100620153 -19664159 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1352 574 259 68 29 chr13 100620153 100620288 -19664024 + B3 SINE B2 82 216 0 1 1352 732 263 40 6 chr13 100620793 100620969 -19663343 + B3A SINE B2 2 183 -15 1 1352 21 36 0 0 chr13 100620989 100621017 -19663295 + AT_rich Low_complexity Low_complexity 1 28 0 1 1352 312 120 0 0 chr13 100621413 100621463 -19662849 + (TCCC)n Simple_repeat Simple_repeat 4 53 0 1 1352 387 191 148 30 chr13 100622181 100622326 -19661986 - RLTR13D3 LTR ERVK 0 1114 870 1 1352 212 0 0 35 chr13 100622330 100622359 -19661953 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 1 1352 243 143 0 0 chr13 100622602 100622644 -19661668 - B3A SINE B2 -156 42 1 1 1352 233 118 0 19 chr13 100623461 100623513 -19660799 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 1352 718 234 92 170 chr13 100623547 100623958 -19660354 - MTE2a LTR MaLR 0 379 1 2 1352 430 387 105 36 chr13 100625091 100625482 -19658830 + MER115 DNA Tip100 39 456 -237 2 1352 1715 263 57 29 chr13 100625491 100626071 -19658241 + RCHARR1 DNA MER1_type 3 598 -376 2 1352 779 240 15 19 chr13 100626514 100626854 -19657458 + RCHARR1 DNA MER1_type 596 974 0 2 1352 249 108 0 0 chr13 100626940 100626977 -19657335 + (CCTG)n Simple_repeat Simple_repeat 1 37 0 2 1352 219 143 69 28 chr13 100627024 100627096 -19657216 + A-rich Low_complexity Low_complexity 6 80 0 2 1352 2602 240 108 47 chr13 100627715 100627786 -19656526 + L1MA8 LINE L1 5280 5347 -944 2 1352 180 0 0 0 chr13 100627786 100627806 -19656506 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1352 2602 240 108 47 chr13 100627806 100628666 -19655646 + L1MA8 LINE L1 5348 6268 -23 2 1352 1071 96 7 0 chr13 100628667 100628813 -19655499 + B1_Mus2 SINE Alu 1 147 0 2 1352 401 176 0 15 chr13 100628814 100628947 -19655365 + A-rich Low_complexity Low_complexity 1 131 0 2 1352 729 0 0 0 chr13 100629099 100629180 -19655132 + (CA)n Simple_repeat Simple_repeat 1 81 0 2 1352 330 340 36 16 chr13 100630118 100630312 -19654000 + Cheshire DNA MER1_type 14 211 -2209 2 1352 751 289 11 8 chr13 100630641 100630851 -19653461 - B3A SINE B2 0 216 3 2 1352 2542 147 82 0 chr13 100630922 100631397 -19652915 + RMER15 LTR ERVL 3 516 -59 2 1352 2525 128 50 5 chr13 100631389 100631827 -19652485 + RLTR28 LTR ERVL 65 522 -2 2 1352 625 203 0 33 chr13 100631827 100632010 -19652302 + (CA)n Simple_repeat Simple_repeat 2 178 0 2 1352 383 253 0 33 chr13 100631974 100632158 -19652154 + (CATA)n Simple_repeat Simple_repeat 1 178 0 2 1352 1240 119 0 28 chr13 100632470 100632652 -19651660 + B2_Mm2 SINE B2 1 177 -18 2 1352 217 191 21 0 chr13 100632653 100632700 -19651612 + (TAAA)n Simple_repeat Simple_repeat 3 50 0 2 1352 368 88 18 0 chr13 100632796 100632853 -19651459 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 2 1352 933 225 123 16 chr13 100633518 100633946 -19650366 - MT2B LTR ERVL 0 601 6 2 1352 601 240 19 126 chr13 100634100 100634362 -19649950 + MLT1A LTR MaLR 22 255 -119 2 1352 535 218 248 33 chr13 100634623 100634865 -19649447 + RMER21B LTR ERV1 274 567 -275 2 1352 625 200 0 24 chr13 100636176 100636299 -19648013 + B1_Mur3 SINE Alu 30 149 0 2 1352 523 62 0 12 chr13 100637733 100637814 -19646498 + Lx2A LINE L1 6923 7002 -6 2 1352 461 62 15 0 chr13 100637819 100637884 -19646428 + (GA)n Simple_repeat Simple_repeat 2 67 0 2 1352 200 268 0 0 chr13 100638136 100638192 -19646120 + CT-rich Low_complexity Low_complexity 3 58 0 2 1352 349 216 90 112 chr13 100638462 100638650 -19645662 + B3A SINE B2 4 187 -11 2 1352 198 0 0 0 chr13 100638882 100638904 -19645408 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1352 630 177 44 0 chr13 100639245 100639358 -19644954 - PB1D9 SINE Alu 0 120 3 2 1352 683 329 135 20 chr13 100639913 100640254 -19644058 - MER74A LTR ERVL -127 431 52 2 1352 1192 79 6 11 chr13 100640539 100640718 -19643594 + (GGGA)n Simple_repeat Simple_repeat 3 180 0 2 1352 329 290 112 37 chr13 100640775 100640990 -19643322 + L1MD2 LINE L1 833 1063 -5484 2 1352 252 0 0 0 chr13 100641233 100641261 -19643051 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 1352 1814 224 31 5 chr13 100641367 100641749 -19642563 - Lx6 LINE L1 -804 6656 6265 2 1352 1187 232 4 22 chr13 100641744 100642013 -19642299 - Lx6 LINE L1 -1417 6043 5780 2 1352 276 53 0 0 chr13 100642016 100642054 -19642258 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1352 260 139 0 0 chr13 100642054 100642090 -19642222 + Lx7 LINE L1 6671 6706 -990 2 1352 569 276 96 10 chr13 100642111 100642309 -19642003 + B3 SINE B2 2 216 0 2 1352 180 0 0 0 chr13 100642409 100642429 -19641883 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 2 1352 684 152 0 0 chr13 100642498 100642616 -19641696 + (TA)n Simple_repeat Simple_repeat 2 119 0 2 1352 1506 73 10 0 chr13 100642783 100642975 -19641337 + B2_Mm2 SINE B2 2 195 0 2 1352 192 200 0 0 chr13 100642975 100643015 -19641297 + A-rich Low_complexity Low_complexity 1 40 0 2 1352 249 334 119 21 chr13 100643405 100643919 -19640393 + L1MD2 LINE L1 4260 4823 -1721 2 1352 244 336 54 36 chr13 100644334 100644445 -19639867 - ORR1E LTR MaLR -163 196 84 2 1352 425 279 76 48 chr13 100644731 100644980 -19639332 + L1MD2 LINE L1 5383 5638 -906 2 1352 332 350 61 18 chr13 100645028 100645307 -19639005 + L1MD2 LINE L1 5690 5980 -658 2 1352 2068 284 132 30 chr13 100645308 100646592 -19637720 - Lx8 LINE L1 -2 7471 6056 2 1352 2034 140 26 6 chr13 100646634 100646986 -19637326 - RLTR15 LTR ERVK 0 359 1 2 1352 462 298 63 22 chr13 100647209 100647480 -19636832 - Charlie5 DNA MER1_type -44 2580 2299 2 1352 4130 134 22 10 chr13 100647487 100648112 -19636200 + Lx5 LINE L1 6270 6902 -148 2 1352 298 315 11 0 chr13 100648452 100648544 -19635768 + PB1D10 SINE Alu 5 97 -20 2 1352 196 304 38 12 chr13 100648560 100648640 -19635672 - MER5A DNA MER1_type -49 140 59 2 1352 1973 122 122 3 chr13 100650293 100650621 -19633691 - ORR1B2 LTR MaLR 0 367 1 2 1352 1916 105 116 105 chr13 100650858 100651221 -19633091 - ORR1B2 LTR MaLR 0 367 1 2 1352 1248 34 0 0 chr13 100651401 100651547 -19632765 - B1_Mm SINE Alu -1 146 1 2 1352 680 191 40 35 chr13 100651617 100651791 -19632521 - MTD LTR MaLR 0 419 245 2 1352 588 184 40 33 chr13 100651826 100652022 -19632290 - MTD LTR MaLR -109 312 131 2 1352 401 254 46 8 chr13 100652033 100652164 -19632148 + L1M3e LINE L1 1936 2071 -4959 2 1352 293 319 109 91 chr13 100652421 100652542 -19631770 + L1M3e LINE L1 2439 2559 -4548 2 1352 1122 62 21 0 chr13 100652542 100652687 -19631625 + B1_Mus1 SINE Alu 1 148 0 2 1352 325 299 156 55 chr13 100652687 100653061 -19631251 + L1M3e LINE L1 2151 2475 -4633 2 1352 455 283 0 38 chr13 100653497 100653629 -19630683 + ID_B1 SINE B4 82 208 -16 2 1352 394 318 26 26 chr13 100653726 100653881 -19630431 + MLT1D LTR MaLR 247 401 -104 2 1352 282 231 0 25 chr13 100653924 100654004 -19630308 + L1M3e LINE L1 5961 6038 -1068 2 1352 233 267 21 32 chr13 100654022 100654115 -19630197 - Lx7 LINE L1 -17 7679 7588 2 1352 216 0 0 0 chr13 100654116 100654140 -19630172 + (TC)n Simple_repeat Simple_repeat 2 25 0 2 1352 1917 240 36 15 chr13 100654149 100654622 -19629690 - Lx7 LINE L1 -361 7335 6853 2 1352 525 269 61 4 chr13 100654627 100654855 -19629457 + L1M3e LINE L1 6038 6278 -828 2 1352 201 39 0 0 chr13 100654868 100654894 -19629418 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 2 1352 241 178 22 0 chr13 100655196 100655241 -19629071 + L1M3e LINE L1 6494 6539 -605 2 1352 22 0 0 0 chr13 100655266 100655288 -19629024 + AT_rich Low_complexity Low_complexity 1 22 0 2 1352 578 14 14 0 chr13 100655346 100655417 -19628895 + (CA)n Simple_repeat Simple_repeat 2 73 0 2 1352 1203 206 48 4 chr13 100655439 100655688 -19628624 + MTD LTR MaLR 19 278 -141 2 1352 1628 231 108 94 chr13 100655772 100656274 -19628038 + RLTR18B LTR ERVK 1 509 -3 2 1352 180 0 0 0 chr13 100656392 100656412 -19627900 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1352 684 216 22 0 chr13 100657017 100657151 -19627161 + B1_Mur4 SINE Alu 6 142 -8 2 1352 283 313 25 57 chr13 100657020 100657179 -19627133 + B4A SINE B4 93 246 -46 2 1352 1035 123 0 0 chr13 100657193 100657356 -19626956 + (GAA)n Simple_repeat Simple_repeat 3 165 0 2 1352 281 352 0 0 chr13 100657764 100657855 -19626457 + (TG)n Simple_repeat Simple_repeat 1 91 0 2 1352 553 188 62 0 chr13 100658553 100658665 -19625647 + B1_Mur3 SINE Alu 27 145 -4 2 1352 1186 34 0 45 chr13 100659872 100660026 -19624286 + B1_Mus2 SINE Alu 1 147 0 2 1352 350 284 93 9 chr13 100660158 100660278 -19624034 + MTE2a LTR MaLR 6 135 -244 2 1352 297 350 54 34 chr13 100660171 100660375 -19623937 + MT2A LTR ERVL 20 227 -306 2 1352 2728 230 113 18 chr13 100660424 100661159 -19623153 + RMER13A LTR ERVK 1 805 -55 2 1352 510 260 8 0 chr13 100661220 100661347 -19622965 + MT2A LTR ERVL 296 423 -110 2 1352 256 297 201 25 chr13 100661348 100661507 -19622805 + MT2A LTR ERVL 343 529 -4 2 1352 3026 71 3 0 chr13 100661820 100662200 -19622112 + L1_Mus1 LINE L1 6187 6567 0 2 1352 751 258 0 30 chr13 100662354 100662522 -19621790 + B3A SINE B2 6 168 -30 2 1352 797 210 80 11 chr13 100662829 100663017 -19621295 - MTD LTR MaLR -8 411 211 2 1352 26 50 0 0 chr13 100663141 100663181 -19621131 + AT_rich Low_complexity Low_complexity 1 40 0 2 1352 397 257 76 0 chr13 100663189 100663294 -19621018 - B3 SINE B2 -17 199 87 2 1353 261 309 0 0 chr13 100663418 100663486 -19620826 - MT2A LTR ERVL -405 128 61 2 1353 415 273 10 0 chr13 100663486 100663585 -19620727 - MTD LTR MaLR -279 100 1 2 1353 1526 215 32 48 chr13 100663829 100664205 -19620107 - ORR1D2 LTR MaLR 0 370 1 2 1353 711 223 6 13 chr13 100664352 100664511 -19619801 + RMER19C LTR ERVK 442 599 -12 2 1353 403 252 45 9 chr13 100664596 100664708 -19619604 + PB1D10 SINE Alu 1 116 -1 2 1353 24 0 0 0 chr13 100665159 100665183 -19619129 + AT_rich Low_complexity Low_complexity 1 24 0 2 1353 270 110 96 16 chr13 100665328 100665390 -19618922 - MTD LTR MaLR -39 380 274 2 1353 363 246 16 41 chr13 100666416 100666539 -19617773 + ID_B1 SINE B4 85 204 -20 2 1353 450 0 0 0 chr13 100666539 100666589 -19617723 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1353 663 289 27 58 chr13 100666928 100667152 -19617160 + ID_B1 SINE B4 8 224 0 2 1353 722 309 74 17 chr13 100667439 100667735 -19616577 + RMER5 LTR ERV1 217 529 -5 2 1353 279 0 0 0 chr13 100667756 100667787 -19616525 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1353 779 269 18 0 chr13 100667807 100668034 -19616278 - L1MA4A LINE L1 -396 5907 5677 2 1353 324 64 0 0 chr13 100668116 100668163 -19616149 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 1353 464 0 18 0 chr13 100668176 100668232 -19616080 + (GA)n Simple_repeat Simple_repeat 2 58 0 2 1353 1080 16 0 0 chr13 100669258 100669386 -19614926 + B1_Mus2 SINE Alu 18 145 -2 2 1353 336 102 0 0 chr13 100669453 100669502 -19614810 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1353 381 155 42 14 chr13 100671306 100671378 -19612934 + B3A SINE B2 2 75 -123 2 1353 1921 108 104 7 chr13 100674424 100674722 -19609590 + ORR1A2 LTR MaLR 1 327 0 2 1353 1067 141 116 5 chr13 100675172 100675371 -19608941 - URR1B DNA MER1_type 0 225 5 3 1353 585 258 6 74 chr13 100675570 100675733 -19608579 + RSINE1 SINE B4 14 165 0 3 1353 283 355 47 31 chr13 100675841 100676033 -19608279 + L2b LINE L2 2804 2998 -421 3 1353 442 263 56 32 chr13 100676060 100676276 -19608036 + L1MD LINE L1 4873 5093 -1053 3 1353 23 78 0 0 chr13 100676278 100676329 -19607983 + AT_rich Low_complexity Low_complexity 1 51 0 3 1353 823 218 136 19 chr13 100676351 100676608 -19607704 - Lx9 LINE L1 -48 7596 7310 3 1353 444 337 151 31 chr13 100676621 100676979 -19607333 + LTR83 LTR ERVL 329 729 -51 3 1353 1901 171 64 17 chr13 100678370 100678727 -19605585 + ORR1D1 LTR MaLR 1 374 0 3 1353 250 348 43 43 chr13 100679089 100679251 -19605061 - MLT1I LTR MaLR -31 380 219 3 1353 999 48 0 0 chr13 100679344 100679469 -19604843 + (TAGA)n Simple_repeat Simple_repeat 3 127 0 3 1353 414 0 0 0 chr13 100679469 100679514 -19604798 + (TG)n Simple_repeat Simple_repeat 2 47 0 3 1353 303 295 154 8 chr13 100679515 100679638 -19604674 - RSINE1 SINE B4 -24 141 1 3 1353 270 0 0 0 chr13 100679838 100679868 -19604444 + (TA)n Simple_repeat Simple_repeat 2 31 0 3 1353 254 362 48 0 chr13 100679996 100680101 -19604211 + L2b LINE L2 3234 3343 -32 3 1353 451 377 24 39 chr13 100682669 100682923 -19601389 + MLT1I LTR MaLR 147 396 -15 3 1353 595 350 128 63 chr13 100682969 100683493 -19600819 - MLT1F2 LTR MaLR -2 558 1 3 1353 362 104 0 0 chr13 100684810 100684858 -19599454 - HAL1-3A_ME LINE L1 -835 2023 1976 3 1353 474 159 0 0 chr13 100684858 100684984 -19599328 + (TCTCTG)n Simple_repeat Simple_repeat 4 129 0 3 1353 2260 155 16 35 chr13 100685062 100685490 -19598822 - RLTR28 LTR ERVL -104 420 1 3 1353 180 0 0 0 chr13 100685498 100685518 -19598794 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 3 1353 279 320 39 49 chr13 100686469 100686571 -19597741 - MER5B DNA MER1_type -15 163 63 3 1353 197 83 0 27 chr13 100686644 100686681 -19597631 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 3 1353 289 330 48 10 chr13 100686849 100686953 -19597359 - Charlie8 DNA MER1_type -2276 152 45 3 1353 822 266 33 66 chr13 100687367 100687641 -19596671 + B4A SINE B4 10 274 -18 3 1353 288 0 0 0 chr13 100687648 100687680 -19596632 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1353 189 175 0 24 chr13 100687757 100687798 -19596514 + MIRc SINE MIR 109 148 -120 3 1353 588 271 8 0 chr13 100688480 100688609 -19595703 + RSINE1 SINE B4 2 131 -34 3 1353 315 0 0 0 chr13 100688629 100688664 -19595648 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1353 579 211 0 45 chr13 100688773 100688907 -19595405 - B1F SINE Alu -13 136 9 3 1353 185 393 0 0 chr13 100689302 100689358 -19594954 + L2b LINE L2 3233 3288 -87 3 1353 319 203 0 0 chr13 100690262 100690321 -19593991 + HAL1-3A_ME LINE L1 1952 2010 -848 3 1353 608 235 3 0 chr13 100690335 100690958 -19593354 + (CA)n Simple_repeat Simple_repeat 1 624 0 3 1353 333 311 29 10 chr13 100691027 100691131 -19593181 - B1F2 SINE Alu -3 146 41 3 1353 243 273 141 13 chr13 100691177 100691255 -19593057 - MIRc SINE MIR -114 154 67 3 1353 717 199 177 101 chr13 100691837 100692226 -19592086 - MTD LTR MaLR 0 419 1 3 1353 369 297 222 9 chr13 100692358 100692579 -19591733 - Lx8 LINE L1 -76 7397 7130 3 1353 383 119 15 0 chr13 100692585 100692652 -19591660 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1353 662 204 14 35 chr13 100692653 100692795 -19591517 - B1_Mur1 SINE Alu -9 140 2 3 1353 453 225 461 7 chr13 100692886 100693042 -19591270 - B4 SINE B4 -63 229 3 3 1353 354 23 0 0 chr13 100693212 100693255 -19591057 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1353 375 221 86 26 chr13 100693283 100693399 -19590913 - RSINE1 SINE B4 -38 127 5 3 1353 208 98 38 38 chr13 100693782 100693835 -19590477 + (TCTCTG)n Simple_repeat Simple_repeat 6 58 0 3 1353 281 229 9 0 chr13 100693830 100693935 -19590377 + (TG)n Simple_repeat Simple_repeat 1 106 0 3 1353 389 216 0 7 chr13 100693977 100694112 -19590200 + (TG)n Simple_repeat Simple_repeat 1 134 0 3 1353 258 194 0 0 chr13 100694151 100694223 -19590089 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 1353 417 248 45 9 chr13 100694389 100694499 -19589813 + RMER5 LTR ERV1 414 527 -7 3 1353 407 307 44 82 chr13 100696771 100696977 -19587335 - MIRb SINE MIR -23 245 48 3 1353 302 200 0 62 chr13 100697820 100697900 -19586412 + L1MA8 LINE L1 6080 6154 -137 3 1353 333 278 261 0 chr13 100697907 100698087 -19586225 + L1MEf LINE L1 970 1196 -5219 3 1353 556 258 25 0 chr13 100698292 100698412 -19585900 - B3 SINE B2 -47 169 47 3 1353 489 227 0 92 chr13 100698491 100698622 -19585690 - PB1D9 SINE Alu -1 119 1 3 1353 393 229 37 28 chr13 100698976 100699084 -19585228 + L1MEf LINE L1 1686 1794 -4621 3 1353 577 243 32 63 chr13 100699089 100699247 -19585065 + RSINE1 SINE B4 11 163 -2 3 1353 240 335 50 44 chr13 100699247 100699270 -19585042 + B2_Mm1a SINE B2 10 191 -2 3 1353 693 257 62 6 chr13 100699280 100699456 -19584856 + B3A SINE B2 2 187 -11 3 1353 264 235 73 0 chr13 100699540 100699608 -19584704 + L1MEf LINE L1 1783 1855 -4545 3 1353 180 0 0 0 chr13 100700007 100700027 -19584285 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 3 1353 192 77 0 0 chr13 100700477 100700503 -19583809 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1353 3596 82 103 6 chr13 100700834 100701348 -19582964 - LTRIS2 LTR ERV1 0 564 1 3 1353 248 297 141 11 chr13 100701431 100701523 -19582789 - ORR1E LTR MaLR -255 104 1 3 1353 1321 227 25 32 chr13 100703302 100703584 -19580728 - ORR1D1 LTR MaLR -4 370 91 3 1353 370 357 162 30 chr13 100703636 100704009 -19580303 - LTR16E1 LTR ERVL -53 485 4 3 1353 587 236 8 8 chr13 100704301 100704429 -19579883 + RSINE1 SINE B4 5 132 -33 3 1353 27 0 0 0 chr13 100704540 100704567 -19579745 + AT_rich Low_complexity Low_complexity 1 27 0 3 1353 893 241 54 0 chr13 100704665 100704868 -19579444 + B3 SINE B2 2 215 -1 3 1353 279 333 87 25 chr13 100704883 100705169 -19579143 - MERVL-int LTR ERVL -2713 2772 2469 3 1353 24 0 0 0 chr13 100705588 100705612 -19578700 + AT_rich Low_complexity Low_complexity 1 24 0 3 1353 1144 214 0 5 chr13 100705618 100705829 -19578483 - B3 SINE B2 -6 210 1 3 1353 414 0 0 0 chr13 100706251 100706297 -19578015 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1353 1273 189 88 54 chr13 100706366 100706723 -19577589 + RLTR20C LTR ERVK 1 479 -99 3 1353 234 0 0 0 chr13 100706723 100706749 -19577563 + (TG)n Simple_repeat Simple_repeat 2 27 0 3 1353 506 266 61 42 chr13 100706749 100706844 -19577468 + RLTR20C LTR ERVK 480 577 -1 3 1353 231 263 90 49 chr13 100706895 100707039 -19577273 + HAL1 LINE L1 2243 2392 -115 3 1353 884 248 29 0 chr13 100707210 100707420 -19576892 - B3 SINE B2 0 216 1 3 1353 1221 125 6 0 chr13 100707461 100707637 -19576675 + URR1B DNA MER1_type 49 225 0 3 1353 342 61 0 0 chr13 100708210 100708259 -19576053 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 3 1353 1163 51 0 0 chr13 100708259 100708396 -19575916 - B1_Mus2 SINE Alu -10 137 1 3 1353 248 143 24 0 chr13 100708513 100708555 -19575757 + CT-rich Low_complexity Low_complexity 2 44 0 3 1353 713 93 0 9 chr13 100708559 100708667 -19575645 + (TTTCC)n Simple_repeat Simple_repeat 3 109 0 3 1353 216 329 52 39 chr13 100708822 100708977 -19575335 - L2 LINE L2 -733 2686 2530 3 1353 432 0 0 0 chr13 100709920 100709968 -19574344 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1353 470 236 146 0 chr13 100709972 100710095 -19574217 - B3A SINE B2 -56 142 2 3 1353 468 0 0 0 chr13 100710162 100710214 -19574098 + (TC)n Simple_repeat Simple_repeat 1 52 0 3 1353 756 0 0 0 chr13 100710214 100710298 -19574014 + (TTTCC)n Simple_repeat Simple_repeat 4 87 0 3 1353 293 304 0 28 chr13 100710386 100710457 -19573855 - RSINE1 SINE B4 -90 75 7 3 1353 264 259 67 11 chr13 100710667 100710757 -19573555 + MER5A DNA MER1_type 57 151 -38 3 1353 299 308 32 64 chr13 100710759 100710884 -19573428 + B1F1 SINE Alu 3 123 -26 3 1353 200 189 0 0 chr13 100710930 100710967 -19573345 + MER5A DNA MER1_type 152 188 -1 3 1353 237 65 0 0 chr13 100711225 100711256 -19573056 + (CAT)n Simple_repeat Simple_repeat 3 33 0 3 1353 189 366 32 0 chr13 100712559 100712652 -19571660 + L2c LINE L2 3280 3375 -12 3 1353 230 337 101 12 chr13 100713144 100713312 -19571000 + L1M5 LINE L1 5635 5817 -307 3 1353 748 184 130 6 chr13 100713621 100713790 -19570522 - B3 SINE B2 -26 190 1 3 1353 21 0 0 0 chr13 100714963 100714984 -19569328 + AT_rich Low_complexity Low_complexity 1 21 0 3 1353 407 273 104 100 chr13 100715005 100715245 -19569067 - B4 SINE B4 -16 276 36 3 1353 256 288 107 27 chr13 100715808 100715958 -19568354 + RSINE1 SINE B4 4 165 0 3 1353 234 297 170 47 chr13 100716200 100716306 -19568006 - L2c LINE L2 -1 3386 3268 3 1353 618 14 0 0 chr13 100716460 100716531 -19567781 + (GA)n Simple_repeat Simple_repeat 2 72 0 3 1353 523 300 63 0 chr13 100717080 100717270 -19567042 + L1MB3 LINE L1 5982 6183 0 3 1353 289 302 139 26 chr13 100717356 100717550 -19566762 - L2c LINE L2 -1210 2209 1994 3 1353 934 249 57 90 chr13 100717714 100717929 -19566383 + B4 SINE B4 3 218 -74 3 1353 588 231 38 91 chr13 100717929 100718138 -19566174 + B3A SINE B2 1 198 0 3 1353 934 249 57 90 chr13 100718138 100718222 -19566090 + B4 SINE B4 219 292 0 3 1353 683 220 6 0 chr13 100718225 100718393 -19565919 + (CA)n Simple_repeat Simple_repeat 2 170 0 3 1353 25 0 0 0 chr13 100718600 100718625 -19565687 + AT_rich Low_complexity Low_complexity 1 25 0 3 1353 30 0 0 0 chr13 100719446 100719476 -19564836 + AT_rich Low_complexity Low_complexity 1 30 0 3 1353 363 271 134 10 chr13 100719515 100719612 -19564700 - PB1D7 SINE Alu -6 114 6 3 1353 1380 75 16 21 chr13 100720362 100720553 -19563759 + B2_Mm2 SINE B2 3 192 -3 3 1353 406 303 120 31 chr13 100720954 100721145 -19563167 + ID_B1 SINE B4 16 223 -1 3 1353 296 330 10 0 chr13 100721913 100722013 -19562299 - PB1D10 SINE Alu -15 102 2 3 1353 222 274 110 0 chr13 100722589 100722662 -19561650 + ID4 SINE ID 2 82 -1 4 1353 528 284 85 35 chr13 100723073 100723332 -19560980 + B4 SINE B4 3 274 -18 4 1353 447 263 16 27 chr13 100724354 100724504 -19559808 - ID_B1 SINE B4 -4 220 77 4 1353 1046 131 49 5 chr13 100724917 100725101 -19559211 + B2_Mm2 SINE B2 4 195 0 4 1353 601 137 0 56 chr13 100725152 100725260 -19559052 - B1_Mur4 SINE Alu -48 102 1 4 1353 321 26 0 0 chr13 100726138 100726176 -19558136 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1353 360 0 0 0 chr13 100726176 100726215 -19558097 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 1353 945 117 146 18 chr13 100726382 100726547 -19557765 + B2_Mm1t SINE B2 1 186 -7 4 1353 232 362 38 0 chr13 100727024 100727104 -19557208 + ID SINE ID 2 84 -140 4 1353 263 289 0 0 chr13 100727047 100727117 -19557195 + ID4 SINE ID 26 95 -57 4 1353 408 40 0 0 chr13 100727118 100727168 -19557144 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1353 2677 53 17 9 chr13 100727293 100727637 -19556675 + L1_Mus2 LINE L1 6220 6566 0 4 1353 598 263 0 22 chr13 100727660 100727796 -19556516 + B1_Mur1 SINE Alu 11 143 -6 4 1353 343 173 0 58 chr13 100728090 100728176 -19556136 - PB1D10 SINE Alu -35 82 2 4 1353 825 248 117 5 chr13 100728179 100728402 -19555910 + B4 SINE B4 25 272 -20 4 1353 261 0 0 0 chr13 100728404 100728433 -19555879 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1353 276 239 27 27 chr13 100729607 100729631 -19554681 + (TATG)n Simple_repeat Simple_repeat 3 26 0 4 1353 764 241 0 0 chr13 100729631 100729772 -19554540 - B1_Mur3 SINE Alu -8 141 1 4 1353 276 239 27 27 chr13 100729772 100729820 -19554492 + (TATG)n Simple_repeat Simple_repeat 2 50 0 4 1353 389 183 110 0 chr13 100729977 100730059 -19554253 - PB1D7 SINE Alu -29 91 1 4 1353 183 42 0 0 chr13 100730259 100730283 -19554029 + (TTG)n Simple_repeat Simple_repeat 2 25 0 4 1353 1037 118 87 33 chr13 100731292 100731444 -19552868 + B2_Mm2 SINE B2 2 164 -31 4 1353 276 30 0 0 chr13 100731444 100731477 -19552835 + (TA)n Simple_repeat Simple_repeat 1 33 0 4 1353 1037 118 87 33 chr13 100731477 100731508 -19552804 + B2_Mm2 SINE B2 165 195 0 4 1353 315 0 0 0 chr13 100731551 100731586 -19552726 + (CA)n Simple_repeat Simple_repeat 1 35 0 4 1353 319 132 0 19 chr13 100731642 100731696 -19552616 + HAL1-3A_ME LINE L1 1976 2028 -830 4 1353 800 230 33 23 chr13 100733153 100733367 -19550945 + B3 SINE B2 1 216 0 4 1353 373 208 0 0 chr13 100734553 100734625 -19549687 + ID4_ SINE ID 5 76 -7 4 1353 1470 73 0 10 chr13 100734714 100734908 -19549404 + B2_Mm2 SINE B2 3 194 -1 4 1353 204 179 0 0 chr13 100736276 100736315 -19547997 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 4 1353 817 275 84 84 chr13 100736369 100736504 -19547808 - MER2 DNA MER2_type 0 345 224 4 1353 1194 54 0 0 chr13 100736504 100736651 -19547661 - B1_Mus2 SINE Alu 0 147 1 4 1353 817 275 84 84 chr13 100736651 100736860 -19547452 - MER2 DNA MER2_type -122 223 1 4 1353 1174 68 0 0 chr13 100738476 100738624 -19545688 + B1_Mus1 SINE Alu 1 148 0 4 1353 189 0 0 0 chr13 100738624 100738645 -19545667 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1353 835 144 81 0 chr13 100738799 100738959 -19545353 + ORR1C1 LTR MaLR 206 378 0 4 1353 369 0 0 0 chr13 100739499 100739540 -19544772 + (TTA)n Simple_repeat Simple_repeat 2 42 0 4 1353 663 97 32 25 chr13 100739540 100739698 -19544614 + (TG)n Simple_repeat Simple_repeat 2 160 0 4 1353 270 289 46 106 chr13 100739755 100739906 -19544406 - RSINE1 SINE B4 0 165 24 4 1353 525 121 0 0 chr13 100740267 100740350 -19543962 + B1_Mus2 SINE Alu 9 91 -56 4 1353 561 167 24 0 chr13 100740351 100740477 -19543835 + GA-rich Low_complexity Low_complexity 4 132 0 4 1353 301 257 68 0 chr13 100741130 100741204 -19543108 + U6 snRNA snRNA 1 79 -28 4 1353 303 276 178 47 chr13 100741204 100741333 -19542979 + RSINE1 SINE B4 15 160 -5 4 1353 1175 63 0 0 chr13 100741399 100741542 -19542770 - B1_Mm SINE Alu 0 147 5 4 1353 212 204 18 18 chr13 100741927 100741982 -19542330 - MIRc SINE MIR -98 170 116 4 1353 22 35 0 0 chr13 100742620 100742649 -19541663 + AT_rich Low_complexity Low_complexity 1 29 0 4 1353 692 233 73 27 chr13 100743720 100743975 -19540337 - L1MB7 LINE L1 -49 6135 5877 4 1353 444 37 0 0 chr13 100744290 100744344 -19539968 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1353 351 250 0 0 chr13 100744632 100744712 -19539600 - B4A SINE B4 -211 81 2 4 1353 597 97 0 0 chr13 100744726 100744829 -19539483 + (CTA)n Simple_repeat Simple_repeat 3 105 0 4 1353 240 59 0 0 chr13 100744829 100744863 -19539449 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1353 553 258 18 30 chr13 100744864 100745028 -19539284 - L1M2 LINE L1 -520 5780 5619 4 1353 214 324 58 19 chr13 100745029 100745133 -19539179 - PB1D10 SINE Alu -9 108 1 4 1353 272 359 8 8 chr13 100745154 100745272 -19539040 + MER45C DNA Tip100 115 232 -721 4 1353 198 0 0 0 chr13 100745571 100745593 -19538719 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 4 1353 571 250 47 0 chr13 100745633 100745761 -19538551 - ID_B1 SINE B4 -10 214 81 4 1353 527 208 10 0 chr13 100746003 100746104 -19538208 + B1_Mur1 SINE Alu 43 144 -5 4 1353 275 294 109 0 chr13 100746616 100746708 -19537604 - PB1D10 SINE Alu -11 106 5 4 1353 383 169 0 10 chr13 100746754 100746850 -19537462 + (TG)n Simple_repeat Simple_repeat 2 96 0 4 1353 808 204 16 49 chr13 100746851 100747036 -19537276 - B3A SINE B2 -16 182 4 4 1353 37 23 0 0 chr13 100747322 100747366 -19536946 + AT_rich Low_complexity Low_complexity 1 44 0 4 1353 418 315 49 0 chr13 100747410 100747553 -19536759 + B4 SINE B4 66 215 -77 4 1353 276 30 0 0 chr13 100747553 100747586 -19536726 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 4 1353 516 306 65 74 chr13 100747597 100747812 -19536500 + B4A SINE B4 2 214 -78 4 1353 636 171 18 0 chr13 100748073 100748184 -19536128 + RSINE1 SINE B4 3 115 -50 4 1353 894 217 15 10 chr13 100748193 100748393 -19535919 + B3 SINE B2 14 214 -2 4 1353 213 175 0 0 chr13 100748449 100748489 -19535823 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1353 1031 150 103 65 chr13 100749317 100749531 -19534781 + URR1B DNA MER1_type 2 223 -2 4 1353 287 286 8 23 chr13 100749854 100750122 -19534190 + G-rich Low_complexity Low_complexity 1 263 0 4 1353 442 284 94 12 chr13 100750154 100750325 -19533987 + MLT1F2 LTR MaLR 3 187 -187 4 1353 484 288 202 71 chr13 100750763 100751100 -19533212 + MLT1F2 LTR MaLR 177 557 -3 4 1353 287 238 0 25 chr13 100751113 100751205 -19533107 + ID4_ SINE ID 8 97 -55 4 1353 453 181 21 21 chr13 100751809 100751905 -19532407 + B3 SINE B2 115 210 -6 4 1353 22 0 0 0 chr13 100752056 100752078 -19532234 + AT_rich Low_complexity Low_complexity 1 22 0 4 1353 217 265 0 0 chr13 100752086 100752135 -19532177 - PB1D9 SINE Alu -6 114 66 4 1353 272 328 40 16 chr13 100752153 100752277 -19532035 - B3 SINE B2 -1 215 89 4 1353 571 152 35 0 chr13 100753398 100753516 -19530796 + B2_Mm2 SINE B2 36 170 -46 4 1353 322 202 0 73 chr13 100754886 100754982 -19529330 - MLT1A1 LTR MaLR 0 408 320 4 1353 217 298 0 0 chr13 100755418 100755475 -19528837 + GA-rich Low_complexity Low_complexity 2 58 0 4 1353 704 290 10 0 chr13 100755795 100756002 -19528310 + B3 SINE B2 1 209 -7 4 1353 512 331 149 62 chr13 100756080 100756611 -19527701 - MER21B LTR ERV1 -21 842 266 4 1353 540 42 0 0 chr13 100757053 100757124 -19527188 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 1353 301 269 57 9 chr13 100758046 100758151 -19526161 - RSINE1 SINE B4 -21 144 35 4 1353 1196 48 7 0 chr13 100758163 100758310 -19526002 + B1_Mus1 SINE Alu 1 148 0 4 1353 22 0 0 0 chr13 100758381 100758403 -19525909 + AT_rich Low_complexity Low_complexity 1 22 0 4 1353 551 168 75 0 chr13 100759252 100759359 -19524953 + PB1D9 SINE Alu 1 115 -5 4 1353 336 48 0 0 chr13 100759360 100759402 -19524910 + (GA)n Simple_repeat Simple_repeat 1 42 0 4 1353 1087 230 18 7 chr13 100760468 100760772 -19523540 - Lx5 LINE L1 -574 6886 6455 4 1353 426 257 79 12 chr13 100760765 100760915 -19523397 + Lx6 LINE L1 7228 7311 -149 4 1353 442 323 12 69 chr13 100761853 100762026 -19522286 + RSINE1 SINE B4 2 164 -1 4 1353 799 246 31 96 chr13 100762068 100762221 -19522091 + ID_B1 SINE B4 3 155 -69 4 1353 298 247 39 0 chr13 100762221 100762298 -19522014 + ID4_ SINE ID 2 81 -2 4 1353 799 246 31 96 chr13 100762298 100762373 -19521939 + ID_B1 SINE B4 156 216 -8 4 1353 201 39 0 0 chr13 100762735 100762761 -19521551 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1353 225 339 40 8 chr13 100762803 100762928 -19521384 + L2 LINE L2 2937 3065 -354 4 1353 2256 67 9 0 chr13 100763114 100763430 -19520882 + ORR1A2 LTR MaLR 1 319 -8 4 1353 180 0 0 0 chr13 100763643 100763663 -19520649 + (CTAA)n Simple_repeat Simple_repeat 4 23 0 4 1353 711 167 22 7 chr13 100763732 100763871 -19520441 + B1_Mur3 SINE Alu 2 142 -7 4 1353 197 132 26 0 chr13 100763877 100763915 -19520397 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 1353 482 279 122 129 chr13 100764425 100764732 -19519580 - RMER13A LTR ERVK -386 474 174 4 1353 3109 32 65 0 chr13 100764732 100765104 -19519208 + MTA_Mm LTR MaLR 1 396 0 4 1353 482 279 122 129 chr13 100765104 100765253 -19519059 - RMER13A LTR ERVK -687 173 22 4 1353 552 30 0 0 chr13 100765422 100765488 -19518824 + (TTTC)n Simple_repeat Simple_repeat 2 67 0 4 1353 1105 63 14 0 chr13 100765488 100765630 -19518682 - B1_Mus2 SINE Alu -2 145 2 4 1353 297 0 0 0 chr13 100765747 100765780 -19518532 + (TTAA)n Simple_repeat Simple_repeat 4 36 0 4 1353 908 147 42 0 chr13 100765787 100765930 -19518382 - B1_Mur3 SINE Alu 0 149 1 5 1353 438 108 0 0 chr13 100766755 100766820 -19517492 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1353 407 280 30 8 chr13 100766829 100766962 -19517350 - ID_B1 SINE B4 -7 217 82 5 1353 361 255 54 35 chr13 100767040 100767160 -19517152 + B1F SINE Alu 1 116 -1 5 1353 328 313 69 26 chr13 100767255 100767488 -19516824 + Kanga1c DNA Tc2 9 251 -478 5 1353 767 148 0 38 chr13 100767956 100768089 -19516223 + B3 SINE B2 3 130 -86 5 1353 836 159 65 43 chr13 100768155 100768339 -19515973 + B2_Mm2 SINE B2 2 189 -6 5 1353 466 234 17 115 chr13 100768800 100768867 -19515445 + RMER30 DNA MER1_type 8 77 -125 5 1353 1178 68 0 0 chr13 100768867 100769014 -19515298 + B1_Mus2 SINE Alu 1 147 0 5 1353 466 234 17 115 chr13 100769014 100769120 -19515192 + RMER30 DNA MER1_type 78 164 -38 5 1353 356 348 50 0 chr13 100769394 100769535 -19514777 + ID_B1 SINE B4 47 194 -30 5 1353 486 147 95 0 chr13 100769560 100769655 -19514657 + B1_Mus2 SINE Alu 39 142 -5 5 1353 285 197 0 16 chr13 100770079 100770141 -19514171 + PB1D10 SINE Alu 29 89 -28 5 1353 321 89 0 0 chr13 100770152 100770197 -19514115 + (CAGA)n Simple_repeat Simple_repeat 3 47 0 5 1353 444 204 231 12 chr13 100770352 100770521 -19513791 + B3 SINE B2 1 206 -10 5 1353 339 25 0 0 chr13 100770917 100770957 -19513355 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1353 642 194 30 0 chr13 100770969 100771103 -19513209 - B1_Mus1 SINE Alu 0 148 11 5 1353 431 275 14 51 chr13 100771147 100771285 -19513027 - ID_B1 SINE B4 -12 212 80 5 1353 1192 61 0 0 chr13 100771525 100771672 -19512640 + B1_Mus2 SINE Alu 1 147 0 5 1353 212 79 79 0 chr13 100772639 100772677 -19511635 + A-rich Low_complexity Low_complexity 2 42 0 5 1353 611 229 63 16 chr13 100772703 100772894 -19511418 + L1MA6 LINE L1 5997 6196 -104 5 1353 291 202 309 0 chr13 100772895 100772979 -19511333 + PB1D9 SINE Alu 10 119 -1 5 1353 459 227 108 47 chr13 100773500 100773637 -19510675 + RSINE1 SINE B4 3 149 -16 5 1353 240 35 0 0 chr13 100773637 100773666 -19510646 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1353 27 29 0 0 chr13 100773685 100773719 -19510593 + AT_rich Low_complexity Low_complexity 1 34 0 5 1353 26 30 0 0 chr13 100773915 100773948 -19510364 + AT_rich Low_complexity Low_complexity 1 33 0 5 1353 524 218 108 13 chr13 100774010 100774168 -19510144 - Lx8 LINE L1 -19 7454 7282 5 1353 222 143 0 0 chr13 100774722 100774771 -19509541 + (T)n Simple_repeat Simple_repeat 1 49 0 5 1353 1133 69 7 0 chr13 100774819 100774963 -19509349 - B1_Mus2 SINE Alu -1 146 2 5 1353 375 228 65 0 chr13 100774989 100775081 -19509231 - PB1D10 SINE Alu -8 109 12 5 1353 244 244 63 53 chr13 100775020 100775115 -19509197 - B4A SINE B4 -134 158 63 5 1353 1413 162 0 5 chr13 100775722 100775945 -19508367 + URR1B DNA MER1_type 1 222 -3 5 1353 800 249 23 23 chr13 100776403 100776617 -19507695 - B3 SINE B2 0 216 3 5 1353 335 346 15 8 chr13 100776629 100776760 -19507552 - ID_B1 SINE B4 -12 212 81 5 1353 23 0 0 0 chr13 100776790 100776813 -19507499 + AT_rich Low_complexity Low_complexity 1 23 0 5 1353 434 202 17 103 chr13 100776849 100776965 -19507347 - RSINE1 SINE B4 -58 107 2 5 1353 323 242 65 24 chr13 100777028 100777197 -19507115 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 5 1353 768 265 60 49 chr13 100777562 100777901 -19506411 - Lx8 LINE L1 -1672 5972 5635 5 1353 565 283 122 11 chr13 100777909 100778186 -19506126 + MTEa LTR MaLR 58 362 -17 5 1353 288 0 0 0 chr13 100779222 100779254 -19505058 + (CA)n Simple_repeat Simple_repeat 1 32 0 5 1353 504 258 0 57 chr13 100779340 100779480 -19504832 + RSINE1 SINE B4 1 132 -33 5 1353 378 0 0 0 chr13 100779480 100779522 -19504790 + (TC)n Simple_repeat Simple_repeat 2 43 0 5 1353 356 0 23 0 chr13 100779536 100779580 -19504732 + (TAA)n Simple_repeat Simple_repeat 2 46 0 5 1353 211 250 35 18 chr13 100779630 100779687 -19504625 + B1F1 SINE Alu 2 59 -90 5 1353 956 214 12 0 chr13 100779839 100780012 -19504300 + B3 SINE B2 2 176 -40 5 1353 225 0 0 0 chr13 100780022 100780047 -19504265 + (TAGA)n Simple_repeat Simple_repeat 1 25 0 5 1353 268 229 80 27 chr13 100780251 100780363 -19503949 + L1MB4 LINE L1 562 679 -5928 5 1353 245 239 99 56 chr13 100780447 100780699 -19503613 + L1MB4 LINE L1 1151 1413 -5194 5 1353 423 328 72 13 chr13 100780706 100781024 -19503288 + Lx9 LINE L1 7120 7456 -188 5 1353 450 0 0 0 chr13 100781025 100781075 -19503237 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1353 270 0 0 0 chr13 100781075 100781104 -19503208 + (GA)n Simple_repeat Simple_repeat 1 30 0 5 1353 658 207 8 0 chr13 100781238 100781359 -19502953 + B3 SINE B2 3 124 -92 5 1353 1290 57 0 0 chr13 100781371 100781600 -19502712 + (CA)n Simple_repeat Simple_repeat 1 229 0 5 1353 406 264 9 43 chr13 100781702 100781817 -19502495 + PB1 SINE Alu 6 116 -11 5 1353 218 359 85 0 chr13 100781871 100781977 -19502335 + PB1D10 SINE Alu 1 115 -2 5 1353 926 224 56 10 chr13 100782008 100782206 -19502106 + B3 SINE B2 10 216 0 5 1353 863 51 145 0 chr13 100782293 100782410 -19501902 + B1_Mus1 SINE Alu 1 134 -14 5 1353 285 29 0 0 chr13 100782456 100782490 -19501822 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1353 497 237 0 0 chr13 100782863 100782956 -19501356 - RSINE1 SINE B4 -72 93 1 5 1353 355 301 62 0 chr13 100782964 100783077 -19501235 - PB1 SINE Alu -7 120 1 5 1353 2379 227 92 14 chr13 100783162 100783615 -19500697 + Lx8 LINE L1 6472 6955 -518 5 1353 402 21 0 0 chr13 100783615 100783662 -19500650 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1353 2379 227 92 14 chr13 100783662 100783835 -19500477 + Lx8 LINE L1 6956 7146 -327 5 1353 446 153 109 109 chr13 100783985 100784132 -19500180 + B1_Mus2 SINE Alu 1 147 0 5 1353 457 181 75 9 chr13 100784465 100784571 -19499741 - B1_Mur3 SINE Alu -4 145 33 5 1353 268 182 0 0 chr13 100786380 100786424 -19497888 + ID4 SINE ID 16 59 -24 5 1353 256 277 112 88 chr13 100786539 100786709 -19497603 - B4A SINE B4 -1 291 118 5 1353 296 312 11 11 chr13 100786979 100787073 -19497239 + ID_B1 SINE B4 103 196 -28 5 1353 207 196 43 0 chr13 100787701 100787747 -19496565 + CT-rich Low_complexity Low_complexity 2 49 0 5 1353 313 237 186 0 chr13 100787747 100787844 -19496468 - PB1D10 SINE Alu -1 116 2 5 1353 32 0 0 0 chr13 100789546 100789578 -19494734 + AT_rich Low_complexity Low_complexity 1 32 0 5 1353 207 189 0 0 chr13 100789780 100789833 -19494479 + A-rich Low_complexity Low_complexity 1 53 0 5 1353 320 281 22 48 chr13 100790564 100790726 -19493586 + B4A SINE B4 5 164 -1 5 1353 344 223 82 41 chr13 100791064 100791162 -19493150 - B3A SINE B2 -92 106 5 5 1353 299 278 19 143 chr13 100791259 100791364 -19492948 + MT2B LTR ERVL 148 239 -362 5 1353 655 165 0 27 chr13 100791291 100791403 -19492909 + PB1D9 SINE Alu 12 120 0 5 1353 255 315 14 20 chr13 100792349 100792495 -19491817 + L1MD LINE L1 5634 5778 -581 5 1353 237 215 119 30 chr13 100792496 100792563 -19491749 + MT2B LTR ERVL 185 257 -344 5 1353 354 200 161 23 chr13 100792512 100792599 -19491713 + B1_Mur1 SINE Alu 50 148 -1 5 1353 236 222 0 0 chr13 100792606 100792660 -19491652 + L1MD LINE L1 5772 5825 -534 5 1353 274 329 13 0 chr13 100793067 100793143 -19491169 + ID4 SINE ID 4 80 -3 5 1353 210 250 0 130 chr13 100793916 100793985 -19490327 - B1F1 SINE Alu -88 61 2 5 1353 492 216 36 9 chr13 100794000 100794112 -19490200 + PB1D9 SINE Alu 2 116 -4 5 1354 878 112 30 0 chr13 100794460 100794594 -19489718 - B1_Mus1 SINE Alu 0 148 11 5 1354 681 176 77 49 chr13 100794609 100794752 -19489560 - B1_Mur2 SINE Alu -1 148 2 5 1354 412 236 157 19 chr13 100795782 100795890 -19488422 + B1F1 SINE Alu 11 133 -16 5 1354 205 263 18 0 chr13 100795890 100795947 -19488365 + GA-rich Low_complexity Low_complexity 3 60 0 5 1354 212 191 56 42 chr13 100796156 100796227 -19488085 + B1_Mur4 SINE Alu 42 113 -37 5 1354 372 312 18 0 chr13 100796253 100796362 -19487950 + PB1D9 SINE Alu 3 113 -7 5 1354 1520 67 5 0 chr13 100796370 100796563 -19487749 + B2_Mm2 SINE B2 2 195 0 5 1354 302 298 129 12 chr13 100796931 100797179 -19487133 + L1_Mur3 LINE L1 4701 4977 -903 5 1354 24 0 0 0 chr13 100797316 100797340 -19486972 + AT_rich Low_complexity Low_complexity 1 24 0 5 1354 307 279 0 0 chr13 100797706 100797785 -19486527 - ID4 SINE ID -4 79 1 5 1354 287 257 92 73 chr13 100798074 100798183 -19486129 + PB1D10 SINE Alu 1 111 -6 5 1354 189 94 0 0 chr13 100798210 100798242 -19486070 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1354 1256 34 0 0 chr13 100798242 100798389 -19485923 - B1_Mus2 SINE Alu 0 147 1 5 1354 225 243 40 54 chr13 100798658 100798732 -19485580 - ID4 SINE ID -6 77 5 5 1354 292 307 65 14 chr13 100798757 100798896 -19485416 - B1F1 SINE Alu -1 148 3 5 1354 462 61 0 0 chr13 100798942 100799008 -19485304 + (TG)n Simple_repeat Simple_repeat 2 67 0 5 1354 243 0 0 0 chr13 100799008 100799035 -19485277 + (CCTG)n Simple_repeat Simple_repeat 1 27 0 5 1354 1029 143 148 0 chr13 100799072 100799268 -19485044 - URR1A DNA MER1_type 0 226 2 5 1354 1267 60 47 42 chr13 100799402 100799593 -19484719 - B2_Mm2 SINE B2 -3 192 1 5 1354 553 261 35 1 chr13 100799623 100799796 -19484516 + B4 SINE B4 1 179 -113 5 1354 472 202 0 0 chr13 100799904 100799988 -19484324 + B3 SINE B2 47 130 -86 5 1354 486 0 0 0 chr13 100800248 100800302 -19484010 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1354 494 68 27 0 chr13 100800591 100800665 -19483647 + (TATG)n Simple_repeat Simple_repeat 2 77 0 6 1354 437 243 8 51 chr13 100801301 100801418 -19482894 - PB1D9 SINE Alu -8 112 1 6 1354 515 254 21 28 chr13 100801994 100802136 -19482176 + B1_Mur2 SINE Alu 1 141 -8 6 1354 510 125 0 0 chr13 100802139 100802219 -19482093 + (A)n Simple_repeat Simple_repeat 1 80 0 6 1354 315 272 148 0 chr13 100802219 100802300 -19482012 + B3 SINE B2 20 112 -104 6 1354 738 275 80 5 chr13 100802373 100802574 -19481738 + B4 SINE B4 3 218 -74 6 1354 818 265 105 108 chr13 100802927 100803206 -19481106 + L1MA5 LINE L1 3291 3557 -2586 6 1354 216 0 0 0 chr13 100803206 100803230 -19481082 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1354 818 265 105 108 chr13 100803230 100803992 -19480320 + L1MA5 LINE L1 3558 4327 -1816 6 1354 657 177 19 108 chr13 100804007 100804165 -19480147 - B1_Mus1 SINE Alu -4 144 1 6 1354 406 291 45 91 chr13 100804165 100804407 -19479905 + L1MA5 LINE L1 4318 4548 -1595 6 1354 373 217 26 1 chr13 100804434 100804519 -19479793 + MTD LTR MaLR 5 90 -306 6 1354 334 305 108 44 chr13 100804521 100804706 -19479606 + L1MA5 LINE L1 5605 5793 -507 6 1354 351 0 0 0 chr13 100804706 100804745 -19479567 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1354 334 305 108 44 chr13 100804745 100804875 -19479437 + L1MA5 LINE L1 5794 5940 -360 6 1354 695 255 0 0 chr13 100805476 100805625 -19478687 + B1F2 SINE Alu 1 149 0 6 1354 26 0 0 0 chr13 100805799 100805825 -19478487 + AT_rich Low_complexity Low_complexity 1 26 0 6 1354 2798 68 23 0 chr13 100806227 100806612 -19477700 + L1_Mus2 LINE L1 5854 6247 -319 6 1354 717 73 0 27 chr13 100806612 100806724 -19477588 + L1_Mus2 LINE L1 6457 6565 -1 6 1354 21 57 0 0 chr13 100806724 100806759 -19477553 + AT_rich Low_complexity Low_complexity 1 35 0 6 1354 232 116 54 68 chr13 100807077 100807151 -19477161 + L1MC4a LINE L1 7809 7881 -1 6 1354 328 183 244 0 chr13 100807614 100807696 -19476616 + URR1A DNA MER1_type 1 102 -124 6 1354 437 259 35 62 chr13 100808536 100808680 -19475632 + RSINE1 SINE B4 25 164 -1 6 1354 198 208 0 0 chr13 100808685 100808733 -19475579 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1354 306 265 96 0 chr13 100808905 100808988 -19475324 + RSINE1 SINE B4 61 151 -14 6 1354 207 69 0 0 chr13 100808998 100809027 -19475285 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1354 660 218 54 35 chr13 100809426 100809612 -19474700 + B3 SINE B2 10 212 -4 6 1354 221 301 135 31 chr13 100809657 100809753 -19474559 + RSINE1 SINE B4 43 148 -17 6 1354 459 52 0 0 chr13 100809754 100809812 -19474500 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1354 408 356 6 75 chr13 100809960 100810030 -19474282 + ID_B1 SINE B4 53 213 -11 6 1354 448 304 29 10 chr13 100810030 100810133 -19474179 + B1F SINE Alu 34 138 -11 6 1354 416 219 212 6 chr13 100810441 100810620 -19473692 + L1MB7 LINE L1 5607 5822 -352 6 1354 274 289 48 12 chr13 100810663 100810747 -19473565 + RSINE1 SINE B4 75 161 -4 6 1354 309 231 114 9 chr13 100810760 100810865 -19473447 + L1MB7 LINE L1 5823 5938 -246 6 1354 294 283 43 0 chr13 100810893 100810985 -19473327 + L1MB7 LINE L1 6071 6166 -12 6 1354 355 206 26 40 chr13 100811129 100811205 -19473107 - RSINE1 SINE B4 -17 148 74 6 1354 332 192 38 25 chr13 100811247 100811327 -19472985 - RSINE1 SINE B4 -83 82 2 6 1354 356 250 25 0 chr13 100811678 100811758 -19472554 - B1F1 SINE Alu -66 83 2 6 1354 291 256 38 13 chr13 100812762 100812841 -19471471 + ID2 SINE ID 1 81 -2 6 1354 506 206 55 18 chr13 100813143 100813252 -19471060 - B1_Mur1 SINE Alu -35 114 2 6 1354 367 297 80 94 chr13 100813252 100813305 -19471007 - B4 SINE B4 -198 94 43 6 1354 1162 61 0 0 chr13 100813305 100813452 -19470860 - B1_Mus1 SINE Alu 0 148 2 6 1354 367 297 80 94 chr13 100813452 100813495 -19470817 - B4 SINE B4 -250 42 1 6 1354 1942 84 84 218 chr13 100814950 100815436 -19468876 + BGLII LTR ERVK 1 421 0 6 1354 612 277 22 72 chr13 100815618 100815790 -19468522 + L1M4 LINE L1 3924 4097 -2049 6 1354 890 155 0 26 chr13 100815790 100815942 -19468370 + B1_Mus1 SINE Alu 1 148 0 6 1354 612 277 22 72 chr13 100815942 100816045 -19468267 + L1M4 LINE L1 4098 4185 -1961 6 1354 369 0 0 0 chr13 100816310 100816351 -19467961 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1354 622 246 42 37 chr13 100817375 100817565 -19466747 - B3A SINE B2 -6 192 2 6 1354 798 142 0 130 chr13 100818328 100818482 -19465830 - B1_Mur3 SINE Alu -7 142 9 6 1354 183 42 0 0 chr13 100818483 100818507 -19465805 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 6 1354 331 250 12 0 chr13 100818782 100818862 -19465450 + ID SINE ID 1 81 -143 6 1354 301 243 49 86 chr13 100818860 100818941 -19465371 + B1F SINE Alu 27 104 -45 6 1354 768 245 18 36 chr13 100819006 100819226 -19465086 + ID_B1 SINE B4 1 216 -8 6 1354 285 265 44 0 chr13 100820090 100820158 -19464154 + ID4 SINE ID 2 72 -11 6 1354 298 159 0 45 chr13 100820541 100820607 -19463705 + 4.5SRNA scRNA scRNA 24 86 -8 6 1354 844 19 9 0 chr13 100820559 100820664 -19463648 + B1_Mm SINE Alu 42 147 0 6 1354 180 0 0 0 chr13 100821995 100822015 -19462297 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1354 555 198 45 0 chr13 100822511 100822622 -19461690 - PB1D9 SINE Alu 0 120 5 6 1354 288 338 74 15 chr13 100822644 100822779 -19461533 + B1F1 SINE Alu 1 143 -6 6 1354 182 37 37 0 chr13 100823101 100823128 -19461184 + (TTTTG)n Simple_repeat Simple_repeat 1 28 0 6 1354 646 132 90 8 chr13 100823132 100823254 -19461058 - B1_Mur4 SINE Alu -17 133 2 6 1354 761 286 27 22 chr13 100823540 100823765 -19460547 + B4A SINE B4 1 226 -66 6 1354 242 182 45 0 chr13 100823908 100823952 -19460360 + ID2 SINE ID 35 80 -3 6 1354 264 231 81 63 chr13 100824034 100824145 -19460167 - Lx4B LINE L1 -4 7054 6942 6 1354 325 291 126 17 chr13 100824367 100824390 -19459922 + RSINE1 SINE B4 3 25 -140 6 1354 194 0 39 0 chr13 100824390 100824416 -19459896 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 6 1354 325 291 126 17 chr13 100824416 100824511 -19459801 + RSINE1 SINE B4 26 133 -32 6 1354 327 337 21 0 chr13 100824546 100824641 -19459671 + ID_B1 SINE B4 79 175 -49 6 1354 243 0 0 0 chr13 100825746 100825773 -19458539 + (TGGA)n Simple_repeat Simple_repeat 2 28 0 6 1354 271 257 0 119 chr13 100826532 100826616 -19457696 - ID4_ SINE ID 0 83 10 6 1354 281 197 111 14 chr13 100826642 100826714 -19457598 - PB1D9 SINE Alu -8 112 34 6 1354 23 0 0 0 chr13 100827031 100827054 -19457258 + AT_rich Low_complexity Low_complexity 1 23 0 6 1354 1152 82 0 0 chr13 100827054 100827201 -19457111 - B1_Mus2 SINE Alu 0 147 1 6 1354 804 205 134 11 chr13 100827267 100827454 -19456858 + B3 SINE B2 3 212 -4 6 1354 761 151 80 23 chr13 100827562 100827738 -19456574 + B2_Mm2 SINE B2 1 186 -9 6 1354 300 171 191 35 chr13 100827762 100827877 -19456435 + ID_B1 SINE B4 84 216 -8 6 1354 954 17 0 8 chr13 100828005 100828123 -19456189 + B1_Mus1 SINE Alu 24 140 -8 6 1354 338 349 0 20 chr13 100828991 100829140 -19455172 - B1F2 SINE Alu 0 149 4 6 1354 22 0 0 0 chr13 100829936 100829958 -19454354 + AT_rich Low_complexity Low_complexity 1 22 0 6 1354 616 267 15 0 chr13 100831602 100831733 -19452579 + B1_Mur3 SINE Alu 2 134 -15 6 1354 1787 184 67 19 chr13 100831720 100832080 -19452232 - MTC LTR MaLR -44 377 1 6 1354 1047 102 0 0 chr13 100832276 100832423 -19451889 + B2_Mm2 SINE B2 2 148 -47 6 1354 363 60 0 0 chr13 100832423 100832473 -19451839 + (CATA)n Simple_repeat Simple_repeat 3 52 0 6 1354 225 0 0 0 chr13 100832648 100832673 -19451639 + (CA)n Simple_repeat Simple_repeat 2 26 0 6 1354 1781 221 43 8 chr13 100832678 100833078 -19451234 + Lx8 LINE L1 6200 6615 -858 6 1354 1151 117 6 0 chr13 100833092 100833255 -19451057 + B2_Mm1t SINE B2 2 165 -28 6 1354 302 164 0 35 chr13 100833311 100833368 -19450944 + B2_Mm2 SINE B2 47 101 -94 6 1354 1069 290 16 10 chr13 100833453 100833789 -19450523 + Lx8 LINE L1 6620 6942 -531 6 1354 486 313 13 26 chr13 100833795 100833946 -19450366 - RSINE1 SINE B4 -15 150 2 6 1354 588 266 42 0 chr13 100833956 100834099 -19450213 - B3A SINE B2 -49 149 1 6 1354 262 325 71 24 chr13 100834521 100834647 -19449665 + ID_B1 SINE B4 82 213 -11 6 1354 26 50 0 0 chr13 100834667 100834707 -19449605 + AT_rich Low_complexity Low_complexity 1 40 0 6 1354 764 184 164 6 chr13 100834920 100835079 -19449233 + ID_B1 SINE B4 6 189 -35 6 1354 309 221 12 0 chr13 100835114 100835200 -19449112 + (TA)n Simple_repeat Simple_repeat 2 88 0 6 1354 226 278 125 0 chr13 100835506 100835578 -19448734 + ID4_ SINE ID 1 81 -2 6 1354 406 280 19 68 chr13 100837041 100837202 -19447110 - ID_B1 SINE B4 -4 220 68 6 1354 487 246 25 58 chr13 100837769 100837890 -19446422 + PB1D9 SINE Alu 4 120 0 6 1354 216 0 0 0 chr13 100837890 100837914 -19446398 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1354 447 271 186 0 chr13 100838504 100838633 -19445679 + RSINE1 SINE B4 3 155 -10 6 1354 615 326 15 20 chr13 100839004 100839201 -19445111 - B3A SINE B2 0 198 3 6 1354 669 204 14 21 chr13 100839349 100839489 -19444823 + B1F2 SINE Alu 11 149 0 6 1354 666 322 17 0 chr13 100839509 100839683 -19444629 + B4 SINE B4 114 290 -2 6 1354 323 235 104 0 chr13 100839772 100839861 -19444451 + ID4_ SINE ID 1 97 -55 6 1354 494 234 23 39 chr13 100840536 100840665 -19443647 + B1_Mur2 SINE Alu 23 149 0 6 1354 30 0 0 0 chr13 100840665 100840695 -19443617 + AT_rich Low_complexity Low_complexity 1 30 0 6 1354 297 252 276 0 chr13 100840901 100841028 -19443284 + RSINE1 SINE B4 2 163 -2 6 1354 2299 184 65 58 chr13 100841155 100841721 -19442591 + Lx5 LINE L1 6478 7047 -3 6 1354 1013 110 22 0 chr13 100841894 100842030 -19442282 + B1_Mus1 SINE Alu 1 139 -9 6 1354 727 298 51 85 chr13 100842385 100842855 -19441457 + MT2B LTR ERVL 1 546 -55 6 1354 539 225 131 62 chr13 100842898 100843158 -19441154 - RLTR15 LTR ERVK -16 343 66 6 1354 275 167 0 15 chr13 100843160 100843227 -19441085 + CT-rich Low_complexity Low_complexity 4 69 0 7 1354 250 88 0 0 chr13 100843282 100843316 -19440996 + MT2B LTR ERVL 500 533 0 6 1354 271 324 70 26 chr13 100843316 100843430 -19440882 - B4A SINE B4 -23 269 151 7 1354 591 164 34 8 chr13 100843506 100843623 -19440689 - PB1D9 SINE Alu 0 120 1 7 1354 676 188 12 127 chr13 100843764 100843929 -19440383 + B1_Mur4 SINE Alu 5 150 0 7 1354 319 286 238 0 chr13 100843972 100844119 -19440193 + B3A SINE B2 1 182 -16 7 1354 204 158 0 0 chr13 100844121 100844159 -19440153 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1354 220 365 33 56 chr13 100844199 100844289 -19440023 + ID_B1 SINE B4 4 91 -133 7 1354 756 303 29 42 chr13 100844603 100844844 -19439468 - B4 SINE B4 -35 257 20 7 1354 279 226 0 19 chr13 100844804 100844858 -19439454 + B1F SINE Alu 9 61 -88 7 1354 481 289 41 21 chr13 100844872 100845017 -19439295 - B1F SINE Alu -1 148 1 7 1354 636 292 15 49 chr13 100845058 100845263 -19439049 + B3A SINE B2 1 198 0 7 1354 369 315 27 34 chr13 100845843 100845991 -19438321 - RSINE1 SINE B4 -8 157 11 7 1354 576 276 19 32 chr13 100846162 100846319 -19437993 - ID_B1 SINE B4 0 224 70 7 1354 261 75 0 0 chr13 100846363 100846403 -19437909 + (TG)n Simple_repeat Simple_repeat 1 40 0 7 1354 593 61 0 58 chr13 100846403 100846507 -19437805 + (GA)n Simple_repeat Simple_repeat 2 99 0 7 1354 404 213 315 0 chr13 100846510 100846618 -19437694 - RSINE1 SINE B4 -22 143 2 7 1354 954 158 20 0 chr13 100846688 100846834 -19437478 + B1_Mur3 SINE Alu 1 149 0 7 1354 337 254 17 42 chr13 100846844 100846963 -19437349 + Lx8 LINE L1 7341 7456 -17 7 1354 1269 48 0 0 chr13 100846976 100847121 -19437191 + B1_Mus2 SINE Alu 1 145 -2 7 1354 24 67 0 0 chr13 100847129 100847174 -19437138 + AT_rich Low_complexity Low_complexity 1 45 0 7 1354 459 260 0 20 chr13 100848236 100848338 -19435974 - B3A SINE B2 -96 102 3 7 1354 272 235 107 16 chr13 100848929 100849026 -19435286 + ID4 SINE ID 3 104 -48 7 1354 2095 250 122 149 chr13 100849067 100850119 -19434193 - MMAR1 DNA Mariner -57 1229 207 7 1354 275 56 0 0 chr13 100850125 100850161 -19434151 + B3 SINE B2 7 42 -174 7 1354 1727 148 112 15 chr13 100850161 100850513 -19433799 + MTC LTR MaLR 1 411 -8 7 1354 548 287 24 1 chr13 100850519 100850657 -19433655 + B3 SINE B2 58 197 -1 7 1354 425 146 216 128 chr13 100850672 100850876 -19433436 - MMAR1 DNA Mariner -1064 222 1 7 1354 309 316 93 19 chr13 100850877 100851135 -19433177 + L1ME2 LINE L1 5815 6091 -73 7 1354 750 78 10 0 chr13 100851302 100851404 -19432908 - B2_Mm2 SINE B2 -91 104 2 7 1354 874 213 68 16 chr13 100851782 100851973 -19432339 + B3 SINE B2 5 205 -11 7 1354 741 231 0 0 chr13 100852318 100852448 -19431864 + B1_Mur1 SINE Alu 3 132 -17 7 1354 700 262 50 20 chr13 100852482 100852681 -19431631 + B3 SINE B2 1 205 -11 7 1354 848 218 0 0 chr13 100852703 100852845 -19431467 + B1_Mur2 SINE Alu 1 142 -7 7 1354 26 30 0 0 chr13 100852846 100852879 -19431433 + AT_rich Low_complexity Low_complexity 1 33 0 7 1354 21 36 0 0 chr13 100853007 100853035 -19431277 + AT_rich Low_complexity Low_complexity 1 28 0 7 1354 509 329 46 7 chr13 100853453 100853606 -19430706 + RSINE1 SINE B4 1 159 -6 7 1354 464 71 86 0 chr13 100853737 100853807 -19430505 + B1_Mur2 SINE Alu 63 138 -11 7 1354 253 0 54 0 chr13 100853807 100853844 -19430468 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 7 1354 429 295 18 0 chr13 100853849 100853961 -19430351 + PB1D10 SINE Alu 4 117 0 7 1354 912 245 35 0 chr13 100854321 100854521 -19429791 + B3 SINE B2 3 209 -7 7 1354 1303 107 11 0 chr13 100854540 100854717 -19429595 + B2_Mm1t SINE B2 1 179 -14 7 1354 224 195 57 11 chr13 100854721 100854809 -19429503 + (CAGAG)n Simple_repeat Simple_repeat 1 92 0 7 1354 327 146 0 18 chr13 100854811 100854867 -19429445 + B2_Mm2 SINE B2 47 101 -94 7 1354 450 94 0 0 chr13 100854889 100854953 -19429359 + (TAGA)n Simple_repeat Simple_repeat 2 65 0 7 1354 321 277 152 28 chr13 100854979 100855124 -19429188 + RSINE1 SINE B4 2 164 -1 7 1354 2558 206 62 70 chr13 100855628 100856244 -19428068 + RMER19C LTR ERVK 1 611 0 7 1354 593 300 22 53 chr13 100856283 100856508 -19427804 - ID_B1 SINE B4 -2 222 5 7 1354 401 300 54 18 chr13 100856535 100856647 -19427665 - PB1D10 SINE Alu -1 116 1 7 1354 287 222 53 53 chr13 100856697 100856773 -19427539 + PB1D7 SINE Alu 45 120 0 7 1354 733 162 7 58 chr13 100856970 100857108 -19427204 - B1_Mus1 SINE Alu -16 132 2 7 1354 321 256 58 0 chr13 100857149 100857235 -19427077 - PB1 SINE Alu -16 111 21 7 1354 24 0 0 0 chr13 100857274 100857298 -19427014 + AT_rich Low_complexity Low_complexity 1 24 0 7 1354 22 0 0 0 chr13 100857308 100857330 -19426982 + AT_rich Low_complexity Low_complexity 1 22 0 7 1354 863 216 130 0 chr13 100857609 100857794 -19426518 + B3 SINE B2 1 209 -7 7 1354 1243 128 22 0 chr13 100857801 100857980 -19426332 + B2_Mm2 SINE B2 3 185 -10 7 1354 246 324 64 9 chr13 100858021 100858130 -19426182 + L1MD LINE L1 3749 3863 -2283 7 1354 525 206 92 31 chr13 100858364 100858494 -19425818 + B1_Mur3 SINE Alu 1 138 -11 7 1354 423 92 0 0 chr13 100858494 100858559 -19425753 + (CATA)n Simple_repeat Simple_repeat 2 66 0 7 1354 27 49 0 0 chr13 100859475 100859516 -19424796 + AT_rich Low_complexity Low_complexity 1 41 0 7 1354 1740 166 62 15 chr13 100860085 100860422 -19423890 + Lx6 LINE L1 6603 6955 -505 7 1354 642 196 150 0 chr13 100860414 100860567 -19423745 + Lx6 LINE L1 7102 7277 -183 7 1354 1447 60 5 42 chr13 100860582 100860774 -19423538 + B2_Mm1a SINE B2 1 185 -8 7 1354 513 0 0 0 chr13 100860971 100861028 -19423284 + (TTTC)n Simple_repeat Simple_repeat 4 60 0 7 1354 215 205 0 0 chr13 100861440 100861479 -19422833 + GA-rich Low_complexity Low_complexity 2 40 0 7 1354 24 77 0 0 chr13 100862388 100862440 -19421872 + AT_rich Low_complexity Low_complexity 1 52 0 7 1354 349 336 120 0 chr13 100862560 100862685 -19421627 - B1F SINE Alu -9 140 1 7 1354 434 130 75 2 chr13 100862889 100862986 -19421326 + B1_Mur1 SINE Alu 48 149 0 7 1354 909 152 0 76 chr13 100863823 100863980 -19420332 - B1_Mur4 SINE Alu -5 145 1 7 1354 1233 112 28 6 chr13 100864028 100864207 -19420105 + B2_Mm1t SINE B2 4 186 -7 7 1354 195 42 0 0 chr13 100864312 100864336 -19419976 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 7 1354 261 292 178 42 chr13 100864438 100864556 -19419756 - B1_Mus2 SINE Alu -12 135 2 7 1354 256 224 0 0 chr13 100864563 100864621 -19419691 - L1MA6 LINE L1 -204 6096 6039 7 1354 265 329 30 102 chr13 100864717 100864835 -19419477 + RSINE1 SINE B4 12 120 -45 7 1354 3117 35 58 60 chr13 100864835 100865000 -19419312 + MTA_Mm LTR MaLR 1 183 -213 7 1354 1040 99 35 7 chr13 100865000 100865142 -19419170 + B1_Mus2 SINE Alu 2 147 0 7 1354 3117 35 58 60 chr13 100865142 100865373 -19418939 + MTA_Mm LTR MaLR 184 396 0 7 1354 265 329 30 102 chr13 100865373 100865420 -19418892 + RSINE1 SINE B4 121 165 0 7 1354 435 227 131 25 chr13 100865623 100865745 -19418567 + B1_Mur1 SINE Alu 15 149 0 7 1354 455 228 124 16 chr13 100865778 100865907 -19418405 + RSINE1 SINE B4 2 144 -21 7 1354 201 213 0 0 chr13 100866022 100866069 -19418243 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1354 1066 253 52 92 chr13 100866098 100866446 -19417866 + RMER15 LTR ERVL 3 466 -109 7 1354 641 229 27 34 chr13 100866446 100866595 -19417717 + B1_Mur4 SINE Alu 3 150 0 7 1354 1066 230 53 60 chr13 100866595 100866698 -19417614 + RMER15 LTR ERVL 467 557 -18 7 1354 230 245 0 0 chr13 100866723 100866772 -19417540 - B1F SINE Alu -99 50 2 7 1354 1110 57 50 0 chr13 100866862 100867003 -19417309 - B1_Mus1 SINE Alu 0 148 1 7 1354 360 338 91 0 chr13 100867058 100867212 -19417100 + B4A SINE B4 1 168 -124 7 1354 256 200 62 0 chr13 100867263 100867343 -19416969 + (CA)n Simple_repeat Simple_repeat 2 86 0 7 1354 308 279 54 71 chr13 100869364 100869476 -19414836 + PB1D7 SINE Alu 10 119 -1 7 1354 469 257 197 0 chr13 100869478 100869630 -19414682 + B3A SINE B2 1 182 -16 7 1354 634 248 8 0 chr13 100869874 100869995 -19414317 + ID_B1 SINE B4 102 223 -1 7 1354 1100 197 40 5 chr13 100870059 100870258 -19414054 + B3 SINE B2 1 206 -10 7 1354 553 198 119 0 chr13 100870279 100870405 -19413907 + B1_Mur3 SINE Alu 1 141 -8 7 1354 206 171 0 24 chr13 100870406 100870448 -19413864 + A-rich Low_complexity Low_complexity 5 45 0 7 1354 1121 132 6 0 chr13 100870560 100870726 -19413586 + B2_Mm1t SINE B2 1 167 -26 7 1354 1246 62 0 0 chr13 100870728 100870873 -19413439 + B1_Mus1 SINE Alu 3 147 -1 7 1354 180 0 0 0 chr13 100870873 100870893 -19413419 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 7 1354 276 104 303 48 chr13 100870958 100871070 -19413242 + B2_Mm2 SINE B2 45 188 -7 7 1354 1389 62 96 0 chr13 100871079 100871256 -19413056 + B2_Mm2 SINE B2 2 195 0 7 1354 356 219 127 60 chr13 100871263 100871430 -19412882 + L1MA5 LINE L1 6124 6300 0 7 1354 707 204 249 6 chr13 100871449 100871622 -19412690 + B3 SINE B2 1 215 -1 7 1354 838 298 18 0 chr13 100871931 100872149 -19412163 + ID_B1 SINE B4 2 223 -1 7 1354 378 196 176 49 chr13 100872162 100872264 -19412048 + PB1D9 SINE Alu 5 119 -1 7 1354 205 236 18 18 chr13 100872265 100872321 -19411991 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 7 1354 368 204 146 0 chr13 100872732 100872835 -19411477 - PB1D9 SINE Alu 0 120 3 7 1354 248 237 17 17 chr13 100873155 100873215 -19411097 + ID4_ SINE ID 17 76 -7 7 1354 207 0 0 0 chr13 100874142 100874165 -19410147 + (T)n Simple_repeat Simple_repeat 1 23 0 8 1354 1203 44 0 0 chr13 100874284 100874421 -19409891 - B1_Mus1 SINE Alu -8 140 4 8 1354 289 203 0 119 chr13 100874449 100874533 -19409779 - ID4_ SINE ID -7 76 3 8 1354 364 327 36 0 chr13 100874597 100874707 -19409605 + PB1D10 SINE Alu 2 115 -2 8 1354 453 192 54 63 chr13 100874781 100874892 -19409420 - PB1D10 SINE Alu -7 110 1 8 1354 459 242 53 30 chr13 100874922 100875054 -19409258 - B3A SINE B2 -63 135 1 8 1354 441 0 0 0 chr13 100875456 100875505 -19408807 + (GA)n Simple_repeat Simple_repeat 2 50 0 8 1354 525 266 0 59 chr13 100875590 100875726 -19408586 + B1F2 SINE Alu 2 129 -20 8 1354 665 194 180 74 chr13 100875988 100876177 -19408135 - B3 SINE B2 -6 210 2 8 1354 440 267 25 8 chr13 100876288 100876409 -19407903 + B3A SINE B2 1 123 -75 8 1354 252 0 0 0 chr13 100876410 100876438 -19407874 + (CA)n Simple_repeat Simple_repeat 2 29 0 8 1354 409 224 152 45 chr13 100876517 100876629 -19407683 - B1_Mur2 SINE Alu -12 137 14 8 1354 945 289 29 25 chr13 100876772 100877254 -19407058 + L1_Mur3 LINE L1 4165 4648 -1232 8 1354 743 132 14 68 chr13 100878623 100878769 -19405543 - B1_Mur4 SINE Alu 0 150 13 8 1354 376 250 62 86 chr13 100878628 100878790 -19405522 - ID_B1 SINE B4 -1 223 66 8 1354 320 247 176 133 chr13 100879590 100879708 -19404604 + ID_B1 SINE B4 6 219 0 8 1354 428 218 23 0 chr13 100879708 100879795 -19404517 + PB1D10 SINE Alu 24 112 -5 8 1354 939 72 58 104 chr13 100879830 100879984 -19404328 - B1_Mus1 SINE Alu 0 148 2 8 1354 533 76 13 0 chr13 100880035 100880114 -19404198 + (GA)n Simple_repeat Simple_repeat 1 80 0 8 1354 298 180 20 0 chr13 100880738 100880788 -19403524 + ID_B1 SINE B4 132 182 -42 8 1354 1800 189 95 156 chr13 100881012 100881345 -19402967 + RLTR18B LTR ERVK 1 269 -243 8 1354 1334 40 0 0 chr13 100881345 100881493 -19402819 - B1_Mus1 SINE Alu 0 148 1 8 1354 1800 189 95 156 chr13 100881493 100881704 -19402608 + RLTR18B LTR ERVK 270 512 0 8 1354 243 0 0 0 chr13 100881727 100881754 -19402558 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 8 1354 1173 52 0 0 chr13 100881756 100881890 -19402422 - B1_Mus2 SINE Alu -13 134 1 8 1354 384 103 0 0 chr13 100881913 100881971 -19402341 + (TG)n Simple_repeat Simple_repeat 1 58 0 8 1354 928 283 60 39 chr13 100882017 100882300 -19402012 - B4A SINE B4 -3 289 1 8 1354 231 61 0 0 chr13 100882632 100882665 -19401647 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 8 1354 439 286 7 97 chr13 100883071 100883226 -19401086 - ID_B1 SINE B4 0 224 84 8 1354 405 277 40 0 chr13 100883434 100883535 -19400777 + ID_B1 SINE B4 105 209 -15 8 1354 508 196 0 10 chr13 100883584 100883682 -19400630 + B1_Mur2 SINE Alu 42 138 -11 8 1354 635 309 91 62 chr13 100884258 100884599 -19399713 - ORR1E LTR MaLR -6 353 3 8 1354 418 260 48 0 chr13 100884690 100884794 -19399518 - PB1D7 SINE Alu 0 120 12 8 1354 451 245 69 0 chr13 100884844 100884946 -19399366 - RSINE1 SINE B4 -53 112 4 8 1354 267 331 79 46 chr13 100885092 100885244 -19399068 - B4 SINE B4 -131 161 5 8 1354 26 0 0 0 chr13 100885454 100885480 -19398832 + AT_rich Low_complexity Low_complexity 1 26 0 8 1354 477 229 105 0 chr13 100885486 100885591 -19398721 + PB1D7 SINE Alu 1 116 -4 8 1354 564 184 48 19 chr13 100885663 100885768 -19398544 + B3A SINE B2 57 164 -34 8 1354 868 259 153 43 chr13 100885780 100886224 -19398088 - RLTR12B LTR ERVK -25 503 11 8 1354 396 0 0 0 chr13 100886230 100886274 -19398038 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1354 1892 136 53 0 chr13 100886277 100886579 -19397733 + ORR1A3 LTR MaLR 1 318 -8 8 1354 1191 86 557 0 chr13 100886607 100886817 -19397495 - ORR1A2 LTR MaLR 0 327 1 8 1354 3694 104 2 6 chr13 100886817 100887356 -19396956 - ORR1A2-int LTR MaLR 0 1963 1427 8 1354 409 103 0 0 chr13 100887356 100887424 -19396888 - ORR1A2-int LTR MaLR -1066 897 830 8 1354 306 299 91 27 chr13 100887468 100887578 -19396734 + PB1D10 SINE Alu 1 117 0 8 1354 26 0 0 0 chr13 100887675 100887701 -19396611 + AT_rich Low_complexity Low_complexity 1 26 0 8 1354 39777 36 0 1 chr13 100887701 100893634 -19390678 - L1Md_A LINE L1 -1 6584 563 8 1354 301 176 0 0 chr13 100893627 100893678 -19390634 - L1Md_A LINE L1 -6282 337 287 8 1354 416 189 56 0 chr13 100894044 100894134 -19390178 - B1_Mur1 SINE Alu -9 140 46 8 1354 259 176 216 0 chr13 100894535 100894609 -19389703 + PB1D10 SINE Alu 28 117 0 8 1354 398 229 43 68 chr13 100895344 100895461 -19388851 + ID_B1 SINE B4 91 204 -20 8 1354 496 220 9 0 chr13 100895922 100896031 -19388281 - B1F2 SINE Alu 0 149 40 8 1354 445 282 30 53 chr13 100896043 100896174 -19388138 - B1F SINE Alu -9 140 13 8 1354 263 289 106 0 chr13 100896221 100896325 -19387987 - B1F SINE Alu -1 148 34 8 1354 243 0 0 0 chr13 100896785 100896812 -19387500 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 8 1354 344 77 19 0 chr13 100897371 100897423 -19386889 + (TC)n Simple_repeat Simple_repeat 2 54 0 8 1354 207 209 0 23 chr13 100898873 100898917 -19385395 + (TG)n Simple_repeat Simple_repeat 1 43 0 8 1354 893 243 32 0 chr13 100898934 100899152 -19385160 - B4A SINE B4 -19 273 49 8 1354 458 279 29 7 chr13 100899359 100899496 -19384816 + RSINE1 SINE B4 9 148 -17 8 1354 3295 46 10 0 chr13 100899497 100899889 -19384423 + MTA_Mm LTR MaLR 1 396 0 8 1354 1434 63 5 11 chr13 100899997 100900188 -19384124 + B2_Mm1t SINE B2 3 192 -1 8 1354 1112 63 28 14 chr13 100900199 100900344 -19383968 + B1_Mus1 SINE Alu 2 148 0 8 1354 473 287 24 8 chr13 100900541 100900664 -19383648 - RSINE1 SINE B4 -38 127 3 8 1354 730 134 100 43 chr13 100901519 100901659 -19382653 - B1_Mur4 SINE Alu -1 149 2 8 1354 207 88 0 0 chr13 100901797 100901831 -19382481 + (TG)n Simple_repeat Simple_repeat 1 34 0 8 1354 1215 124 32 0 chr13 100901952 100902137 -19382175 - B2_Mm1t SINE B2 -1 192 2 8 1354 993 99 14 28 chr13 100902664 100902809 -19381503 - B1_Mur3 SINE Alu -6 143 1 8 1354 303 309 12 0 chr13 100902832 100902913 -19381399 + PB1D10 SINE Alu 25 106 -11 8 1354 420 259 76 25 chr13 100903040 100903159 -19381153 - PB1 SINE Alu 0 127 3 8 1354 279 203 43 0 chr13 100903217 100903286 -19381026 - ID4 SINE ID -9 74 3 8 1354 240 214 0 0 chr13 100903333 100903389 -19380923 + T-rich Low_complexity Low_complexity 1 56 0 8 1354 488 204 0 0 chr13 100904214 100904307 -19380005 + B3 SINE B2 1 93 -123 8 1354 369 312 0 0 chr13 100904879 100904972 -19379340 - B1F1 SINE Alu -53 96 4 8 1354 343 183 0 0 chr13 100905095 100905155 -19379157 - ID4 SINE ID -2 81 22 8 1354 321 296 38 46 chr13 100905173 100905304 -19379008 - PB1D10 SINE Alu -16 131 2 8 1354 397 205 47 0 chr13 100905333 100905438 -19378874 - B1F2 SINE Alu 0 120 2 8 1354 389 290 40 0 chr13 100905440 100905564 -19378748 - ID_B1 SINE B4 -12 212 84 8 1354 590 229 50 11 chr13 100905807 100905988 -19378324 - B3A SINE B2 -9 189 2 8 1354 340 214 43 0 chr13 100906205 100906275 -19378037 - ID4_ SINE ID -6 77 5 8 1354 635 257 130 27 chr13 100906312 100906496 -19377816 - B3 SINE B2 -13 203 1 8 1354 621 104 259 0 chr13 100906542 100906677 -19377635 - ORR1C2 LTR MaLR 0 384 215 8 1354 21 82 0 14 chr13 100906925 100906958 -19377354 + AT_rich Low_complexity Low_complexity 1 33 0 8 1354 1131 74 0 13 chr13 100906958 100907108 -19377204 - B1_Mus1 SINE Alu 0 148 1 8 1354 21 82 0 14 chr13 100907108 100907148 -19377164 + AT_rich Low_complexity Low_complexity 1 40 0 8 1354 422 217 118 34 chr13 100907158 100907277 -19377035 + RSINE1 SINE B4 29 157 -8 8 1354 699 201 55 61 chr13 100907865 100907893 -19376419 - RSINE1 SINE B4 0 165 144 8 1354 192 40 0 0 chr13 100907893 100907918 -19376394 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1354 699 201 55 61 chr13 100907918 100908053 -19376259 - RSINE1 SINE B4 -22 143 3 8 1354 276 247 52 0 chr13 100908062 100908139 -19376173 - PB1D10 SINE Alu -6 111 31 8 1354 180 0 0 0 chr13 100908313 100908333 -19375979 + (CCCCCG)n Simple_repeat Simple_repeat 2 21 0 8 1354 332 160 145 13 chr13 100908934 100909010 -19375302 + PB1 SINE Alu 24 109 -18 8 1354 3388 43 2 0 chr13 100909472 100909867 -19374445 + MTA_Mm LTR MaLR 1 396 0 8 1354 779 183 0 0 chr13 100910045 100910187 -19374125 + B1_Mus1 SINE Alu 1 142 -6 8 1354 275 283 109 36 chr13 100910446 100910556 -19373756 - L2 LINE L2 -777 2642 2525 8 1354 837 275 19 0 chr13 100911493 100911700 -19372612 - B3 SINE B2 -5 211 1 8 1354 409 259 98 0 chr13 100911793 100911905 -19372407 - PB1 SINE Alu -3 124 2 8 1354 1892 144 0 27 chr13 100912320 100912648 -19371664 - ORR1A3 LTR MaLR 0 326 8 8 1354 1712 75 0 4 chr13 100912700 100912940 -19371372 - RMER2 LTR ERV1 -328 239 1 8 1354 972 176 38 11 chr13 100912951 100913135 -19371177 - URR1B DNA MER1_type -36 189 1 8 1354 295 230 27 91 chr13 100913945 100914004 -19370308 - PB1 SINE Alu -1 126 74 8 1354 1425 70 48 0 chr13 100914004 100914190 -19370122 - B2_Mm2 SINE B2 0 195 1 8 1354 295 230 27 91 chr13 100914190 100914240 -19370072 - PB1 SINE Alu -54 73 25 8 1354 228 322 37 110 chr13 100914761 100914791 -19369521 - MT2B LTR ERVL -291 310 191 8 1354 487 270 31 16 chr13 100914791 100914919 -19369393 - B1_Mur1 SINE Alu -19 130 1 8 1354 804 115 0 0 chr13 100915440 100915562 -19368750 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 8 1354 238 270 14 0 chr13 100915718 100915792 -19368520 + L1MEg LINE L1 1432 1506 -4578 8 1354 212 308 51 0 chr13 100915891 100915969 -19368343 + PB1D7 SINE Alu 32 113 -7 9 1354 549 44 0 0 chr13 100916097 100916165 -19368147 + (TG)n Simple_repeat Simple_repeat 1 68 0 9 1354 533 271 60 0 chr13 100916171 100916304 -19368008 - RSINE1 SINE B4 -22 143 3 9 1354 399 244 11 11 chr13 100916483 100916574 -19367738 + B1F SINE Alu 46 136 -13 9 1354 346 307 12 68 chr13 100916659 100916820 -19367492 + ID_B1 SINE B4 68 219 -5 9 1354 349 285 29 44 chr13 100916686 100916822 -19367490 + B1F1 SINE Alu 13 146 -3 9 1354 40 67 0 0 chr13 100916824 100916899 -19367413 + AT_rich Low_complexity Low_complexity 1 75 0 9 1354 240 172 0 0 chr13 100916925 100916983 -19367329 + (TG)n Simple_repeat Simple_repeat 1 58 0 9 1354 609 274 17 40 chr13 100916997 100917061 -19367251 - B4A SINE B4 -2 290 232 9 1354 1772 175 49 6 chr13 100917061 100917405 -19366907 + RLTR15 LTR ERVK 1 359 0 9 1354 609 274 17 40 chr13 100917405 100917515 -19366797 - B4A SINE B4 -61 231 120 9 1354 668 261 69 65 chr13 100917657 100917874 -19366438 - ID_B1 SINE B4 -2 222 5 9 1354 221 262 33 0 chr13 100918383 100918444 -19365868 + ID4_ SINE ID 19 81 -2 9 1354 421 248 51 8 chr13 100919325 100919443 -19364869 - L1MC4 LINE L1 -1141 6901 6779 9 1354 491 272 84 66 chr13 100919501 100919835 -19364477 + RLTR15 LTR ERVK 4 343 -16 9 1354 313 255 92 0 chr13 100920140 100920238 -19364074 - PB1D10 SINE Alu -8 109 3 9 1354 485 286 11 80 chr13 100920608 100920783 -19363529 - RSINE1 SINE B4 0 165 3 9 1354 476 273 56 60 chr13 100921626 100921860 -19362452 + MER2 DNA MER2_type 86 318 -27 9 1354 357 206 28 0 chr13 100921890 100921997 -19362315 + GA-rich Low_complexity Low_complexity 3 112 0 9 1354 387 0 0 0 chr13 100922964 100923007 -19361305 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 1354 305 323 56 70 chr13 100923020 100923163 -19361149 - RSINE1 SINE B4 -21 144 4 9 1354 240 299 63 36 chr13 100923666 100923777 -19360535 + MIR SINE MIR 118 231 -31 9 1354 500 261 157 32 chr13 100925213 100925414 -19358898 + L1M4 LINE L1 4906 5118 -1028 9 169 426 121 0 0 chr13 100925414 100925480 -19358832 + (TA)n Simple_repeat Simple_repeat 2 67 0 9 1355 500 261 157 32 chr13 100925480 100925591 -19358721 + L1M4 LINE L1 5119 5256 -890 9 1355 234 188 42 0 chr13 100925669 100925717 -19358595 + L1M4 LINE L1 5232 5281 -859 9 1355 588 266 29 7 chr13 100925724 100925864 -19358448 - B1F SINE Alu 0 149 7 9 1355 415 279 78 43 chr13 100925889 100926147 -19358165 + L1M4 LINE L1 5337 5603 -581 9 1355 840 276 11 15 chr13 100926147 100926412 -19357900 + RLTR16 LTR ERVK 1 264 -241 9 1355 450 260 36 58 chr13 100926750 100926889 -19357423 + B1F SINE Alu 6 141 -8 9 1355 540 253 17 50 chr13 100926892 100927071 -19357241 + L1M4 LINE L1 5606 5778 -402 9 1355 385 342 9 0 chr13 100927183 100927297 -19357015 - ID_B1 SINE B4 -71 153 39 9 1355 399 301 30 8 chr13 100927415 100927549 -19356763 + ID_B1 SINE B4 80 216 -8 9 1355 434 307 60 7 chr13 100927562 100927713 -19356599 + RSINE1 SINE B4 7 165 0 9 1355 3025 174 13 26 chr13 100927742 100928436 -19355876 + ETnERV2-int LTR ERVK 5786 6240 -1166 9 1355 461 96 27 14 chr13 100928639 100928713 -19355599 + ETnERV2-int LTR ERVK 7332 7406 0 9 1355 2088 121 101 37 chr13 100928713 100929091 -19355221 + RLTR9D LTR ERVK 1 402 -1 9 1355 770 245 169 48 chr13 100929327 100929700 -19354612 + MTD LTR MaLR 1 418 -1 9 1355 365 204 84 21 chr13 100933221 100933316 -19350996 - ID_B1 SINE B4 -8 216 116 9 1355 6829 191 39 12 chr13 100933477 100935187 -19349125 + Lx5 LINE L1 5197 6972 -78 9 1355 318 26 0 0 chr13 100935299 100935338 -19348974 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 9 1355 671 136 48 121 chr13 100935338 100935514 -19348798 - B2_Mm2 SINE B2 -16 200 2 9 1355 289 260 63 4 chr13 100935550 100935655 -19348657 - B1F SINE Alu -6 111 6 9 1355 467 313 4 84 chr13 100935819 100936056 -19348256 + ID_B1 SINE B4 3 220 -4 9 1355 29 0 0 0 chr13 100936959 100936988 -19347324 + AT_rich Low_complexity Low_complexity 1 29 0 9 1355 658 317 14 5 chr13 100936990 100937199 -19347113 + B4A SINE B4 2 212 -80 9 1355 705 209 330 0 chr13 100937216 100937452 -19346860 + Lx8 LINE L1 6391 6704 -769 9 1355 659 233 7 14 chr13 100937452 100937600 -19346712 + B1_Mur1 SINE Alu 1 147 -2 9 1355 20881 73 49 104 chr13 100937601 100939725 -19344587 + Lx3_Mus LINE L1 2525 4681 -1205 9 1355 260 260 18 5 chr13 100939725 100939945 -19344367 + RMER17D LTR ERVK 281 503 -386 9 1355 20881 73 49 104 chr13 100939945 100940127 -19344185 + Lx3_Mus LINE L1 4682 4867 -1019 9 1355 6816 37 4 0 chr13 100940127 100940932 -19343380 + L1Md_F2 LINE L1 5765 6572 -10 9 1355 20881 73 46 91 chr13 100940932 100942112 -19342200 + Lx3_Mus LINE L1 4868 6050 -959 9 1355 423 0 0 0 chr13 100942112 100942159 -19342153 + (GGGA)n Simple_repeat Simple_repeat 2 48 0 9 1355 10352 75 28 6 chr13 100942159 100943118 -19341194 + Lx3_Mus LINE L1 6051 7009 0 9 1355 349 243 34 67 chr13 100943539 100943658 -19340654 + Lx8 LINE L1 7018 7132 -341 9 1355 547 250 15 0 chr13 100943719 100943855 -19340457 + ID_B1 SINE B4 80 217 -7 9 1355 231 290 31 31 chr13 100943743 100943871 -19340441 - YREP_Mm Unknown Unknown -1518 294 167 9 1355 263 311 55 28 chr13 100943882 100943991 -19340321 + B1F1 SINE Alu 1 112 -37 9 1355 418 100 0 0 chr13 100944005 100944065 -19340247 - B1_Mur4 SINE Alu -5 145 86 9 1355 217 65 42 42 chr13 100944077 100944125 -19340187 + (TCTCTG)n Simple_repeat Simple_repeat 3 50 0 9 1355 585 178 0 0 chr13 100944199 100944351 -19339961 + (TG)n Simple_repeat Simple_repeat 2 153 0 9 1355 201 247 0 0 chr13 100944370 100944451 -19339861 + (TG)n Simple_repeat Simple_repeat 2 82 0 9 1355 279 0 0 0 chr13 100944452 100944483 -19339829 + (TC)n Simple_repeat Simple_repeat 2 32 0 9 1355 6703 60 6 19 chr13 100944540 100945406 -19338906 + RLTR13A LTR ERVK 1 855 0 9 1355 893 241 19 10 chr13 100945691 100945896 -19338416 + B3 SINE B2 1 207 -9 9 1355 6814 70 55 7 chr13 100945912 100946826 -19337486 + RLTR13A2 LTR ERVK 1 958 0 9 1355 490 235 60 15 chr13 100947857 100947991 -19336321 + B1F SINE Alu 3 142 -7 9 1355 641 13 0 0 chr13 100948436 100948514 -19335798 + RLTR13A LTR ERVK 417 494 -361 9 1355 717 231 44 25 chr13 100949086 100949290 -19335022 + B3 SINE B2 5 212 -4 9 1355 351 211 0 0 chr13 100949481 100949576 -19334736 + (TG)n Simple_repeat Simple_repeat 2 96 0 9 1355 227 317 64 40 chr13 100950435 100950560 -19333752 - B1_Mur4 SINE Alu -22 128 1 9 1355 430 268 64 14 chr13 100950560 100950639 -19333673 - B4 SINE B4 -205 87 2 9 1355 516 16 0 0 chr13 100951011 100951072 -19333240 + (TATG)n Simple_repeat Simple_repeat 1 61 0 9 1355 579 262 13 27 chr13 100951072 100951221 -19333091 - B3 SINE B2 -23 193 47 9 1355 341 337 0 29 chr13 100951240 100951344 -19332968 - PB1D10 SINE Alu -15 102 2 9 1355 349 204 360 7 chr13 100951758 100951911 -19332401 + ID_B1 SINE B4 1 207 -17 9 1355 392 305 59 30 chr13 100952043 100952178 -19332134 + RSINE1 SINE B4 25 163 -2 9 1355 763 219 69 15 chr13 100952213 100952417 -19331895 - B3 SINE B2 0 216 2 9 1355 825 245 0 0 chr13 100952492 100952651 -19331661 + B3A SINE B2 2 160 -38 9 1355 381 58 0 0 chr13 100952672 100952724 -19331588 + (CA)n Simple_repeat Simple_repeat 1 52 0 9 1355 477 105 0 0 chr13 100952724 100952810 -19331502 + (GA)n Simple_repeat Simple_repeat 1 86 0 9 1355 1593 221 59 8 chr13 100954075 100954462 -19329850 + MTD LTR MaLR 13 419 0 9 1355 360 355 8 0 chr13 100954482 100954606 -19329706 - PB1 SINE Alu -2 125 1 9 1355 483 69 0 0 chr13 100954673 100954745 -19329567 + (TC)n Simple_repeat Simple_repeat 2 73 0 9 1355 297 260 104 0 chr13 100955485 100955562 -19328750 + B3A SINE B2 34 118 -80 9 1355 1536 226 98 85 chr13 100955677 100956394 -19327918 + RMER12 LTR ERVK 10 746 -1102 9 1355 405 86 0 0 chr13 100956548 100956606 -19327706 + (TG)n Simple_repeat Simple_repeat 1 58 0 9 1355 394 238 40 32 chr13 100956675 100956838 -19327474 + RMER12 LTR ERVK 1124 1317 -5 9 1355 263 288 12 0 chr13 100958158 100958238 -19326074 - BC1_Mm scRNA scRNA -58 94 14 9 1355 476 184 0 10 chr13 100958437 100958541 -19325771 + GA-rich Low_complexity Low_complexity 3 105 0 9 1355 536 261 6 87 chr13 100958562 100958734 -19325578 + B3A SINE B2 41 198 0 9 1355 496 246 16 8 chr13 100959428 100959555 -19324757 + RSINE1 SINE B4 1 128 -37 9 1355 320 274 12 12 chr13 100959610 100959695 -19324617 - L2b LINE L2 -4 3371 3287 9 1355 570 276 47 0 chr13 100960140 100960267 -19324045 + ETnERV2-int LTR ERVK 7070 7202 -204 9 1355 11360 71 5 1 chr13 100960721 100961046 -19323266 + L1Md_F2 LINE L1 4410 4733 -1150 9 1355 252 0 0 0 chr13 100961046 100961074 -19323238 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 9 1355 11360 67 13 0 chr13 100961074 100962664 -19321648 + L1Md_F2 LINE L1 4734 6345 -237 9 1355 2869 102 46 0 chr13 100962664 100963076 -19321236 + L1_Mus1 LINE L1 6137 6567 0 9 1355 1278 87 23 11 chr13 100963443 100963617 -19320695 - B2_Mm2 SINE B2 -19 176 1 9 1355 455 323 45 0 chr13 100963636 100963791 -19320521 - B3A SINE B2 -36 162 1 9 1355 284 243 14 28 chr13 100964345 100964417 -19319895 - ID4_ SINE ID -10 73 3 9 1355 196 53 0 50 chr13 100964435 100964475 -19319837 + (TTTTG)n Simple_repeat Simple_repeat 2 39 0 9 1355 609 162 0 54 chr13 100964486 100964549 -19319763 - B1_Mur4 SINE Alu -5 145 88 9 1355 3051 18 9 0 chr13 100964549 100964892 -19319420 - ORR1A1 LTR MaLR 0 346 1 9 1355 609 162 0 54 chr13 100964892 100964939 -19319373 - B1_Mur4 SINE Alu -63 87 41 9 1355 314 0 0 161 chr13 100964942 100965104 -19319208 + (CTCTG)n Simple_repeat Simple_repeat 5 140 0 9 1355 226 267 0 77 chr13 100965105 100965170 -19319142 - B1_Mur4 SINE Alu -90 60 1 9 1355 378 312 43 14 chr13 100965185 100965325 -19318987 - B1F2 SINE Alu -5 144 1 9 1355 342 176 0 0 chr13 100966279 100966364 -19317948 + (TG)n Simple_repeat Simple_repeat 1 85 0 9 1355 295 246 82 132 chr13 100966381 100966540 -19317772 - RSINE1 SINE B4 0 165 15 9 1355 904 180 26 37 chr13 100966588 100966778 -19317534 - B2_Mm2 SINE B2 -6 189 2 9 1355 256 279 18 78 chr13 100966795 100966962 -19317350 - L1M5 LINE L1 -347 5777 5621 9 1355 573 232 5 116 chr13 100967702 100967926 -19316386 + L1_Rod LINE L1 1337 1535 -4312 9 1355 2261 181 39 7 chr13 100967933 100968339 -19315973 + MTC LTR MaLR 3 421 0 9 1355 902 226 128 7 chr13 100968339 100968620 -19315692 + L1_Rod LINE L1 1849 2163 -3684 9 1355 363 200 12 24 chr13 100968626 100968708 -19315604 + MTD LTR MaLR 6 86 -333 1 1355 1396 247 36 63 chr13 100968708 100969184 -19315128 + Lx9 LINE L1 7013 7475 -169 1 1355 248 192 0 37 chr13 100969198 100969252 -19315060 - Lx9 LINE L1 -216 7428 7377 1 1355 3440 245 191 20 chr13 100969254 100970730 -19313582 + L1_Rod LINE L1 2278 4006 -1841 9 1355 776 249 68 36 chr13 100970731 100970992 -19313320 + Lx9 LINE L1 7057 7454 -190 1 1355 459 0 0 0 chr13 100970992 100971043 -19313269 + (TG)n Simple_repeat Simple_repeat 1 51 0 1 1355 400 352 61 40 chr13 100971043 100971059 -19313253 + Lx9 LINE L1 7326 7340 -133 1 1355 278 340 20 10 chr13 100971332 100971430 -19312882 - PB1D10 SINE Alu -16 101 3 1 1355 198 0 0 0 chr13 100971534 100971556 -19312756 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1 1355 249 33 0 0 chr13 100971655 100971685 -19312627 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 1355 513 0 0 0 chr13 100971688 100971745 -19312567 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1355 1152 220 86 39 chr13 100971904 100972240 -19312072 - ORR1E LTR MaLR -4 355 4 1 1355 22 35 0 0 chr13 100972322 100972351 -19311961 + AT_rich Low_complexity Low_complexity 1 29 0 1 1355 1866 230 33 101 chr13 100972557 100973062 -19311250 + MT2A LTR ERVL 1 469 -64 1 1355 611 60 12 0 chr13 100973062 100973146 -19311166 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 1 1355 1866 230 33 101 chr13 100973146 100973212 -19311100 + MT2A LTR ERVL 470 533 0 1 1355 987 272 50 41 chr13 100973278 100973616 -19310696 + Lx8 LINE L1 6410 6750 -723 1 1355 453 36 0 0 chr13 100973630 100973685 -19310627 + (CA)n Simple_repeat Simple_repeat 2 56 0 1 1355 262 216 0 0 chr13 100973702 100973753 -19310559 - RLTR20D LTR ERVK -100 441 391 1 1355 738 236 97 41 chr13 100973750 100974019 -19310293 - RLTR20D LTR ERVK -284 284 1 1 1355 2226 290 30 42 chr13 100974021 100974188 -19310124 + Lx8 LINE L1 6746 6913 -560 1 1355 1805 182 205 44 chr13 100974188 100974229 -19310083 - MT2A LTR ERVL 0 533 495 1 1355 282 29 0 0 chr13 100974229 100974264 -19310048 + (CA)n Simple_repeat Simple_repeat 1 35 0 1 1355 1805 182 205 44 chr13 100974264 100974681 -19309631 - MT2A LTR ERVL -39 494 1 1 1355 2226 290 30 42 chr13 100974681 100975130 -19309182 + Lx8 LINE L1 6914 7355 -118 1 1355 432 0 0 0 chr13 100975130 100975178 -19309134 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 1 1355 2226 290 30 42 chr13 100975178 100975297 -19309015 + Lx8 LINE L1 7356 7473 0 1 1355 310 339 54 0 chr13 100975608 100975720 -19308592 - L2 LINE L2 -777 2642 2525 1 1355 1343 178 140 30 chr13 100975752 100976087 -19308225 - ORR1D1 LTR MaLR 0 374 3 1 1355 922 236 138 11 chr13 100976097 100976380 -19307932 - ORR1D2 LTR MaLR -51 319 1 1 1355 199 291 123 45 chr13 100976437 100976657 -19307655 - L2 LINE L2 -993 2426 2190 1 1355 2407 177 34 73 chr13 100976728 100977290 -19307022 + MYSERV6-int LTR ERVK 8420 8959 0 1 1355 693 258 36 12 chr13 100977291 100977542 -19306770 + RLTR15 LTR ERVK 1 257 -102 1 1355 1410 132 116 0 chr13 100977623 100977874 -19306438 - ORR1C1 LTR MaLR -98 280 1 1 1355 27 0 0 0 chr13 100977880 100977907 -19306405 + AT_rich Low_complexity Low_complexity 1 27 0 1 1355 710 171 27 59 chr13 100978101 100978287 -19306025 - Lx9 LINE L1 -7 7637 7458 1 1355 208 162 26 79 chr13 100978288 100978402 -19305910 + (CATATA)n Simple_repeat Simple_repeat 1 108 0 1 1355 733 236 107 72 chr13 100978454 100978773 -19305539 + RLTR14 LTR ERV1 1 330 -52 1 1355 2511 46 12 0 chr13 100978808 100979137 -19305175 + IAPEY_LTR LTR ERVK 53 385 0 1 1355 1898 210 19 0 chr13 100979147 100979513 -19304799 - Lx9 LINE L1 -225 7419 7047 1 1355 218 208 42 0 chr13 100979660 100979708 -19304604 - PB1 SINE Alu -2 125 76 1 1355 464 202 0 0 chr13 100979737 100979821 -19304491 - RMER21A LTR ERV1 -6 941 858 1 1355 229 362 0 0 chr13 100980016 100980096 -19304216 - ID4_ SINE ID 0 83 4 1 1355 2016 169 16 74 chr13 100980144 100980592 -19303720 - RMER21A LTR ERV1 0 947 526 1 1355 1119 170 50 200 chr13 100980567 100980927 -19303385 - RMER21A LTR ERV1 -641 306 1 1 1355 1217 212 4 218 chr13 100981186 100981644 -19302668 - ORR1B2 LTR MaLR 0 367 8 1 1355 1369 105 16 0 chr13 100981689 100981879 -19302433 - B2_Mm2 SINE B2 0 195 3 1 1355 526 270 0 7 chr13 100982367 100982505 -19301807 + B3 SINE B2 7 143 -73 1 1355 240 265 105 39 chr13 100983937 100984090 -19300222 + L1ME2 LINE L1 5859 6021 -143 1 1355 195 162 0 0 chr13 100985323 100985360 -19298952 + T-rich Low_complexity Low_complexity 1 37 0 1 1355 553 198 0 0 chr13 100985684 100985785 -19298527 + B3 SINE B2 30 130 -86 1 1355 26 0 0 0 chr13 100985817 100985843 -19298469 + AT_rich Low_complexity Low_complexity 1 26 0 1 1355 204 111 0 0 chr13 100986210 100986246 -19298066 + (TG)n Simple_repeat Simple_repeat 1 36 0 1 1355 289 325 16 57 chr13 100986247 100986371 -19297941 - RSINE1 SINE B4 -41 124 6 1 1355 453 242 60 8 chr13 100986395 100986528 -19297784 + MER2 DNA MER2_type 91 230 -115 1 1355 1584 196 120 3 chr13 100986538 100986906 -19297406 + MTD LTR MaLR 5 415 -4 1 1355 181 167 48 0 chr13 100987750 100987792 -19296520 + MIR SINE MIR 86 129 -133 1 1355 723 250 85 19 chr13 100987827 100988034 -19296278 + Lx9 LINE L1 6400 6621 -1023 1 1355 1071 106 0 0 chr13 100988034 100988194 -19296118 + (TC)n Simple_repeat Simple_repeat 1 160 0 1 1355 22 0 0 0 chr13 100988471 100988493 -19295819 + AT_rich Low_complexity Low_complexity 1 22 0 1 1355 293 292 16 110 chr13 100988549 100988676 -19295636 - PB1D7 SINE Alu 0 120 6 1 1355 246 192 0 0 chr13 100988951 100989003 -19295309 + GA-rich Low_complexity Low_complexity 3 54 0 1 1355 267 322 95 34 chr13 100989312 100989460 -19294852 + MIR SINE MIR 88 244 -18 1 1355 403 291 69 25 chr13 100990019 100990223 -19294089 + L1M4 LINE L1 4910 5122 -1024 1 1355 362 286 40 121 chr13 100990231 100990454 -19293858 + MT2A LTR ERVL 6 210 -323 1 1355 609 92 0 0 chr13 100990456 100990554 -19293758 + (TC)n Simple_repeat Simple_repeat 1 98 0 1 1355 525 232 124 42 chr13 100990554 100990790 -19293522 + MT2A LTR ERVL 192 599 -2 1 1355 243 235 2 40 chr13 100990853 100990937 -19293375 + L1M4 LINE L1 5177 5256 -887 1 1355 1056 166 9 36 chr13 100993863 100994082 -19290230 + RLTR1B LTR ERV1 300 512 0 1 1355 13786 116 83 58 chr13 100994082 100995509 -19288803 + RLTR1B-int LTR ERV1 1 1548 -2150 1 1355 612 0 0 0 chr13 100995509 100995577 -19288735 + (GA)n Simple_repeat Simple_repeat 1 68 0 1 1355 13786 69 67 35 chr13 100995577 100996510 -19287802 + RLTR1B-int LTR ERV1 1139 2108 -1191 1 1355 5280 41 52 2 chr13 100996507 100997140 -19287172 + RLTR1B-int LTR ERV1 2635 3299 0 1 1355 1326 75 95 5 chr13 100997140 100997501 -19286811 + RLTR1B LTR ERV1 1 436 -76 1 1355 409 316 104 26 chr13 100997907 100998099 -19286213 + ID_B1 SINE B4 17 223 -1 1 1355 480 18 0 0 chr13 100998609 100998666 -19285646 + (GA)n Simple_repeat Simple_repeat 2 58 0 1 1355 4085 80 15 4 chr13 100998731 100999268 -19285044 + L1Md_F2 LINE L1 6017 6559 -23 1 1355 410 0 20 0 chr13 100999268 100999318 -19284994 + (TAA)n Simple_repeat Simple_repeat 1 51 0 1 1355 375 23 0 0 chr13 101000807 101000851 -19283461 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1355 5462 82 17 1 chr13 101000939 101001784 -19282528 + L1VL4 LINE L1 233 1090 -2469 2 1355 3333 145 16 2 chr13 101001784 101002329 -19281983 + Lx2 LINE L1 6445 6997 0 3 1355 366 298 46 12 chr13 101002329 101002417 -19281895 + L1_Mur3 LINE L1 1449 1542 -4338 4 1355 292 225 14 0 chr13 101002540 101002611 -19281701 + B2_Mm2 SINE B2 1 72 -123 5 1355 1558 164 73 91 chr13 101002776 101003225 -19281087 + BGLII_B LTR ERVK 1 441 0 6 1355 423 0 0 0 chr13 101003505 101003552 -19280760 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 1355 996 90 14 0 chr13 101003552 101003697 -19280615 - B2_Mm2 SINE B2 -47 148 2 8 1355 39361 6 0 1 chr13 101003874 101009668 -19274644 + L1Md_A LINE L1 1 5586 -297 9 1355 9224 2 0 0 chr13 101009668 101010664 -19273648 + L1Md_A LINE L1 5587 6582 0 9 1355 396 0 0 0 chr13 101012181 101012225 -19272087 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1355 1306 102 38 0 chr13 101012482 101012668 -19271644 + B2_Mm2 SINE B2 1 193 -2 1 1355 3564 239 110 40 chr13 101012948 101014032 -19270280 - RMER1A Other Other -3 1027 46 1 1355 504 0 0 0 chr13 101014052 101014108 -19270204 + (TG)n Simple_repeat Simple_repeat 2 57 0 1 1355 205 213 16 32 chr13 101014241 101014304 -19270008 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1355 798 144 232 6 chr13 101014509 101014677 -19269635 + B3 SINE B2 2 207 -9 1 1355 231 36 0 0 chr13 101014678 101014706 -19269606 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1355 520 276 0 46 chr13 101014728 101014875 -19269437 + B3 SINE B2 4 145 -71 1 1355 621 38 0 0 chr13 101014875 101014955 -19269357 + (CA)n Simple_repeat Simple_repeat 2 81 0 1 1355 520 276 0 46 chr13 101014955 101014982 -19269330 + B3 SINE B2 146 170 -46 1 1355 552 257 137 0 chr13 101016204 101016387 -19267925 - MTC LTR MaLR -18 403 196 1 1355 756 186 7 33 chr13 101016409 101016559 -19267753 - B1_Mus2 SINE Alu 0 147 2 2 1355 232 274 0 31 chr13 101016653 101016717 -19267595 - B1F2 SINE Alu -75 74 13 2 1355 799 231 104 36 chr13 101017125 101017376 -19266936 - ORR1E LTR MaLR -4 355 88 2 1355 14698 81 8 3 chr13 101017390 101020118 -19264194 - L1_Mus1 LINE L1 -1 6566 3822 2 1355 341 187 24 39 chr13 101020122 101020214 -19264098 - ORR1E LTR MaLR -284 90 1 2 1355 1877 211 48 5 chr13 101020354 101020754 -19263558 - MTC LTR MaLR -4 417 1 2 1355 449 320 8 0 chr13 101020772 101020894 -19263418 - RSINE1 SINE B4 -40 125 3 2 1355 300 242 122 11 chr13 101021168 101021295 -19263017 - PB1D7 SINE Alu -11 138 3 2 1355 244 220 0 0 chr13 101021650 101021700 -19262612 - ID_B1 SINE B4 -27 197 148 2 1355 234 0 0 0 chr13 101021794 101021820 -19262492 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 1355 385 256 16 55 chr13 101021846 101022028 -19262284 - RNLTR23 LTR ERVK 0 642 468 2 1355 3633 132 116 13 chr13 101022529 101023142 -19261170 + RLTR33 LTR ERVK 1 676 -2 3 1355 398 20 20 0 chr13 101023154 101023205 -19261107 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1355 5663 120 33 8 chr13 101023242 101024172 -19260140 - RMER17B LTR ERVK -4 954 1 3 1355 1752 72 4 4 chr13 101024197 101024434 -19259878 + L1Md_F2 LINE L1 6346 6582 0 3 1355 1419 228 18 18 chr13 101024452 101024778 -19259534 - MT2A LTR ERVL -114 419 94 3 1355 397 295 41 0 chr13 101024777 101024899 -19259413 - MT2A LTR ERVL -404 129 3 3 1355 212 242 172 81 chr13 101024899 101024995 -19259317 - ID_B1 SINE B4 -35 189 85 3 1355 761 314 33 25 chr13 101025115 101025190 -19259122 - B4A SINE B4 -14 278 205 3 1355 6547 49 48 4 chr13 101025190 101026009 -19258303 - RLTR13A LTR ERVK 0 855 1 3 1355 761 314 33 25 chr13 101026009 101026208 -19258104 - B4A SINE B4 -88 204 2 3 1355 574 317 22 11 chr13 101026488 101026673 -19257639 + ID_B1 SINE B4 18 204 -20 3 1355 3883 164 31 19 chr13 101026711 101027506 -19256806 + RLTR22_Mur LTR ERVK 1 805 -1043 3 1355 740 166 188 31 chr13 101027722 101027946 -19256366 + RLTR22_Mur LTR ERVK 1590 1848 0 3 1355 1775 225 47 48 chr13 101027946 101028525 -19255787 + Lx3C LINE L1 5817 6394 -582 4 1355 5211 55 0 3 chr13 101028510 101029155 -19255157 + L1_Mm LINE L1 5137 5779 -104 4 1355 3447 198 102 49 chr13 101029204 101030304 -19254008 - RLTR45-int LTR ERVK -4168 3076 2091 4 1355 332 149 27 141 chr13 101030321 101030444 -19253868 - RLTR45-int LTR ERVK -3204 110 2 4 1355 2159 121 13 153 chr13 101030446 101030617 -19253695 - RLTR9C LTR ERVK 0 393 245 4 1355 1516 73 0 0 chr13 101030617 101030808 -19253504 + B2_Mm1a SINE B2 2 192 -1 4 1355 2159 121 13 153 chr13 101030808 101031093 -19253219 - RLTR9C LTR ERVK -149 244 1 4 1355 1117 219 75 36 chr13 101031093 101031372 -19252940 - RMER2 LTR ERV1 -277 290 1 4 1355 3440 178 10 50 chr13 101031385 101032201 -19252111 - RLTR21 LTR ERVK -515 1057 275 4 1355 8250 48 2 2 chr13 101032201 101033735 -19250577 - L1Md_F2 LINE L1 0 6582 5049 4 1355 1905 131 0 7 chr13 101033731 101034024 -19250288 - L1Md_F LINE L1 -6216 303 13 4 1355 967 171 153 27 chr13 101034025 101034279 -19250033 - RLTR21 LTR ERVK -1286 286 1 4 1355 270 312 39 0 chr13 101034558 101034635 -19249677 - PB1D7 SINE Alu -40 80 1 4 1355 5977 74 7 1 chr13 101034860 101035958 -19248354 - L1_Mus1 LINE L1 -239 6328 5226 4 1355 797 96 0 8 chr13 101036132 101036258 -19248054 + (TTTC)n Simple_repeat Simple_repeat 3 127 0 5 1355 406 294 8 0 chr13 101036265 101036391 -19247921 - B1_Mus2 SINE Alu -1 146 20 5 1355 366 23 0 0 chr13 101036491 101036534 -19247778 + (TG)n Simple_repeat Simple_repeat 1 43 0 5 1355 780 274 47 31 chr13 101036872 101037128 -19247184 + MER2 DNA MER2_type 86 345 0 5 1355 489 138 0 0 chr13 101037159 101037239 -19247073 + (GGA)n Simple_repeat Simple_repeat 3 82 0 5 1355 1793 75 12 4 chr13 101037270 101037524 -19246788 + L1_Mus3 LINE L1 6383 6638 0 5 1355 261 0 0 0 chr13 101037540 101037569 -19246743 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 1355 211 278 35 76 chr13 101038232 101038376 -19245936 + MIR3 SINE MIR 1 138 -70 5 1355 297 260 39 29 chr13 101038419 101038522 -19245790 - RLTR23 LTR ERV1 0 430 327 5 1355 1310 216 59 16 chr13 101038569 101038941 -19245371 + RLTR22_Mur LTR ERVK 409 796 -1052 5 1355 373 274 22 15 chr13 101039000 101039137 -19245175 + RLTR22_Mur LTR ERVK 1579 1716 -132 5 1355 434 311 67 0 chr13 101039335 101039470 -19244842 - RSINE1 SINE B4 -18 147 4 6 1355 401 285 7 46 chr13 101039494 101039645 -19244667 - B1F SINE Alu 0 149 5 6 1355 314 185 0 0 chr13 101039893 101039947 -19244365 + RMER21B LTR ERV1 75 128 -714 6 1355 366 256 143 65 chr13 101039952 101040182 -19244130 + RMER21B LTR ERV1 320 567 -275 6 1355 383 318 46 10 chr13 101041371 101041568 -19242744 + L1_Rod LINE L1 493 696 -6912 6 1355 261 229 144 58 chr13 101041683 101041758 -19242554 + L1_Rod LINE L1 711 789 -6819 6 1355 3962 67 76 8 chr13 101041758 101042282 -19242030 + LTRIS2 LTR ERV1 5 564 0 6 1355 261 229 144 58 chr13 101042282 101042345 -19241967 + L1_Rod LINE L1 790 861 -6747 6 1355 2226 203 29 67 chr13 101042357 101043102 -19241210 + L1_Rod LINE L1 1203 1909 -3974 6 1355 3900 63 45 4 chr13 101043102 101043610 -19240702 + L1Md_F2 LINE L1 6042 6570 -12 6 1355 2112 40 0 0 chr13 101044959 101045206 -19239106 + L1Md_F2 LINE L1 5340 5586 -297 6 1355 7811 53 21 3 chr13 101045206 101046173 -19238139 + L1Md_F2 LINE L1 5587 6570 -12 6 1355 357 215 84 21 chr13 101046497 101046592 -19237720 - ID_B1 SINE B4 -8 216 116 6 1355 3685 194 61 5 chr13 101046752 101047905 -19236407 + Lx5 LINE L1 5197 6423 -627 6 1355 534 291 9 96 chr13 101048090 101048310 -19236002 + ID_B1 SINE B4 3 203 -21 6 1355 1313 128 0 5 chr13 101049097 101049317 -19234995 + RMER19A LTR ERVK 1 219 -518 7 1355 903 232 19 10 chr13 101049532 101049737 -19234575 + B3 SINE B2 1 207 -9 7 1355 4478 64 3 15 chr13 101049743 101050330 -19233982 + L1Md_F2 LINE L1 6002 6581 -1 7 1355 2024 128 0 3 chr13 101050593 101050915 -19233397 + ORR1A3 LTR MaLR 1 321 -5 7 1355 252 86 0 0 chr13 101050915 101050950 -19233362 + (CATA)n Simple_repeat Simple_repeat 2 36 0 7 1355 563 248 29 0 chr13 101051738 101051875 -19232437 + B1F1 SINE Alu 3 143 -6 7 1355 671 226 59 25 chr13 101052710 101052914 -19231398 + B3 SINE B2 5 215 -1 7 1355 256 138 31 0 chr13 101053117 101053182 -19231130 + (TG)n Simple_repeat Simple_repeat 1 67 0 7 1355 243 252 61 35 chr13 101054909 101055024 -19229288 + L1ME2 LINE L1 5904 6021 -143 7 1355 416 19 19 0 chr13 101055318 101055371 -19228941 + (TC)n Simple_repeat Simple_repeat 2 55 0 7 1355 330 80 0 0 chr13 101055376 101055426 -19228886 + (CA)n Simple_repeat Simple_repeat 2 51 0 8 1355 27 49 0 0 chr13 101056348 101056389 -19227923 + AT_rich Low_complexity Low_complexity 1 41 0 8 1356 580 222 18 27 chr13 101056680 101056840 -19227472 + B3 SINE B2 29 184 -9 8 1356 351 0 0 0 chr13 101057214 101057253 -19227059 + (TG)n Simple_repeat Simple_repeat 1 39 0 8 1356 400 350 13 47 chr13 101057254 101057404 -19226908 - RSINE1 SINE B4 -15 150 6 8 1356 393 250 62 8 chr13 101057432 101057561 -19226751 + MER2 DNA MER2_type 95 230 -115 8 1356 1635 199 118 3 chr13 101057567 101057939 -19226373 + MTD LTR MaLR 1 415 -4 8 1356 32735 70 2 6 chr13 101058234 101063472 -19220840 + L1Md_F2 LINE L1 368 5585 -298 8 1356 8183 45 3 0 chr13 101063473 101064452 -19219860 + L1Md_F2 LINE L1 5587 6568 -14 8 1356 654 241 96 15 chr13 101065101 101065299 -19219013 + Lx9 LINE L1 6400 6613 -1031 8 1356 521 171 8 0 chr13 101065307 101065424 -19218888 + CT-rich Low_complexity Low_complexity 1 118 0 8 1356 28 48 0 0 chr13 101065697 101065739 -19218573 + AT_rich Low_complexity Low_complexity 1 42 0 9 1356 277 278 4 86 chr13 101065770 101065908 -19218404 - PB1D7 SINE Alu 0 120 6 9 1356 251 161 0 18 chr13 101066184 101066241 -19218071 + GA-rich Low_complexity Low_complexity 2 57 0 9 1356 216 0 0 0 chr13 101066372 101066396 -19217916 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1356 312 310 88 34 chr13 101066535 101066682 -19217630 + MIR SINE MIR 90 244 -18 9 1356 393 276 85 25 chr13 101067247 101067448 -19216864 + L1M4 LINE L1 4910 5122 -1024 9 1356 605 247 7 156 chr13 101067456 101067709 -19216603 + MT2A LTR ERVL 6 383 -201 9 1356 876 128 0 0 chr13 101067709 101067888 -19216424 + (TC)n Simple_repeat Simple_repeat 2 180 0 9 1356 399 270 12 44 chr13 101067888 101068075 -19216237 + MT2A LTR ERVL 380 599 -2 9 1356 238 236 0 65 chr13 101068145 101068222 -19216090 + L1M4 LINE L1 5182 5253 -887 9 1356 213 256 0 0 chr13 101068236 101068275 -19216037 - ID4_ SINE ID -22 61 23 9 1356 409 316 104 26 chr13 101071612 101071804 -19212508 + ID_B1 SINE B4 17 223 -1 9 1356 240 35 0 0 chr13 101072316 101072345 -19211967 + (GA)n Simple_repeat Simple_repeat 2 30 0 1 1356 3935 91 7 11 chr13 101072421 101072974 -19211338 + L1Md_F2 LINE L1 6032 6582 0 1 1356 438 132 0 0 chr13 101074490 101074566 -19209746 + (TG)n Simple_repeat Simple_repeat 2 77 0 1 1356 5386 80 17 6 chr13 101074626 101075475 -19208837 + L1VL4 LINE L1 233 1090 -2469 1 1356 3373 143 13 2 chr13 101075475 101076020 -19208292 + Lx2 LINE L1 6445 6995 -2 1 1356 437 275 64 34 chr13 101076020 101076105 -19208207 + L1_Mur3 LINE L1 1449 1542 -4338 1 1356 321 197 14 0 chr13 101076229 101076300 -19208012 + B2_Mm2 SINE B2 1 72 -123 1 1356 1467 169 73 97 chr13 101076464 101076916 -19207396 + BGLII_B LTR ERVK 1 441 0 1 1356 1059 117 12 0 chr13 101077193 101077356 -19206956 - B2_Mm2 SINE B2 -29 166 2 1 1356 342 0 0 0 chr13 101077584 101077622 -19206690 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1356 306 0 0 0 chr13 101077622 101077655 -19206657 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1 1356 225 0 0 0 chr13 101077871 101077896 -19206416 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 1 1356 1227 124 38 0 chr13 101077900 101078086 -19206226 + B2_Mm2 SINE B2 1 193 -2 1 1356 21518 70 2 1 chr13 101078363 101081771 -19202541 + L1Md_A LINE L1 607 3974 -1909 1 1356 10060 49 1 1 chr13 101081763 101082980 -19201332 + L1Md_A LINE L1 4667 5883 0 1 1356 831 269 80 0 chr13 101083012 101083250 -19201062 + ORR1D2 LTR MaLR 61 317 -53 1 1356 3537 208 105 20 chr13 101083283 101084365 -19199947 - RMER1B Other Other -2 1064 18 1 1356 615 14 0 0 chr13 101084385 101084457 -19199855 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1356 212 224 0 43 chr13 101084591 101084661 -19199651 + (CATA)n Simple_repeat Simple_repeat 4 70 0 1 1356 747 141 0 0 chr13 101084863 101084984 -19199328 + B3 SINE B2 7 127 -89 1 1356 231 36 0 0 chr13 101085026 101085054 -19199258 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1356 531 275 5 64 chr13 101085076 101085225 -19199087 + B3 SINE B2 4 145 -71 1 1356 462 88 0 0 chr13 101085225 101085293 -19199019 + (CA)n Simple_repeat Simple_repeat 2 69 0 1 1356 531 275 5 64 chr13 101085293 101085345 -19198967 + B3 SINE B2 146 193 -23 1 1356 570 249 138 0 chr13 101086558 101086739 -19197573 - MTC LTR MaLR -20 401 196 1 1356 723 193 7 33 chr13 101086761 101086911 -19197401 - B1_Mus2 SINE Alu 0 147 2 1 1356 204 67 0 0 chr13 101086968 101086998 -19197314 + (CCCCCA)n Simple_repeat Simple_repeat 3 32 0 1 1356 232 274 0 31 chr13 101087017 101087081 -19197231 - B1F2 SINE Alu -75 74 13 1 1356 807 219 104 36 chr13 101087489 101087740 -19196572 - ORR1E LTR MaLR -4 355 88 1 1356 14511 83 9 4 chr13 101087753 101090480 -19193832 - L1_Mus1 LINE L1 -1 6566 3822 1 1356 343 237 21 31 chr13 101090480 101090576 -19193736 - ORR1E LTR MaLR -264 95 1 1 1356 430 312 17 91 chr13 101090687 101090722 -19193590 - RSINE1 SINE B4 0 165 144 1 1356 1949 201 47 5 chr13 101090722 101091126 -19193186 - MTC LTR MaLR 0 421 1 1 1356 430 312 17 91 chr13 101091126 101091266 -19193046 - RSINE1 SINE B4 -22 143 3 1 1356 300 242 122 11 chr13 101091541 101091668 -19192644 - PB1D7 SINE Alu -11 138 3 1 1356 244 220 0 0 chr13 101092024 101092074 -19192238 - ID_B1 SINE B4 -27 197 148 1 1356 270 0 0 0 chr13 101092187 101092217 -19192095 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1356 428 244 16 55 chr13 101092217 101092399 -19191913 - RNLTR23 LTR ERVK 0 642 468 1 1356 3140 135 109 56 chr13 101092900 101093387 -19190925 + RLTR33 LTR ERVK 1 532 -146 1 1356 5466 42 0 0 chr13 101093387 101094030 -19190282 + L1Md_T LINE L1 5940 6582 0 1 1356 3140 135 109 56 chr13 101094030 101094186 -19190126 + RLTR33 LTR ERVK 533 678 0 1 1356 423 52 0 0 chr13 101094191 101094249 -19190063 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1356 5662 118 34 10 chr13 101094286 101095217 -19189095 - RMER17B LTR ERVK -4 954 1 1 1356 1842 59 0 0 chr13 101095242 101095478 -19188834 + L1Md_F2 LINE L1 6346 6581 -1 1 1356 1440 222 18 18 chr13 101095508 101095834 -19188478 - MT2A LTR ERVL -114 419 94 1 1356 411 287 41 0 chr13 101095833 101095955 -19188357 - MT2A LTR ERVL -404 129 3 1 1356 725 294 43 40 chr13 101096167 101096242 -19188070 - B4A SINE B4 -14 278 205 1 1356 6478 53 48 2 chr13 101096242 101097059 -19187253 - RLTR13A LTR ERVK 0 855 2 1 1356 725 294 43 40 chr13 101097059 101097259 -19187053 - B4A SINE B4 -88 204 2 1 1356 540 322 22 11 chr13 101097529 101097714 -19186598 + ID_B1 SINE B4 18 204 -20 1 1356 3814 158 31 48 chr13 101097752 101098578 -19185734 + RLTR22_Mur LTR ERVK 1 812 -1036 1 1356 740 166 188 31 chr13 101098789 101099013 -19185299 + RLTR22_Mur LTR ERVK 1590 1848 0 1 1356 1855 230 36 43 chr13 101099013 101099595 -19184717 + Lx3C LINE L1 5817 6394 -582 1 1356 5268 51 0 3 chr13 101099580 101100225 -19184087 + L1_Mm LINE L1 5137 5779 -104 1 1356 3474 200 101 48 chr13 101100274 101101374 -19182938 - RLTR45-int LTR ERVK -4168 3076 2091 1 1356 332 149 27 141 chr13 101101391 101101514 -19182798 - RLTR45-int LTR ERVK -3204 110 2 1 1356 2318 116 14 83 chr13 101101516 101101938 -19182374 - RLTR9C LTR ERVK 0 393 1 1 1356 1068 227 75 36 chr13 101101938 101102217 -19182095 - RMER2 LTR ERV1 -277 290 1 1 1356 3448 180 9 49 chr13 101102230 101103044 -19181268 - RLTR21 LTR ERVK -515 1057 277 1 1356 35352 72 2 8 chr13 101103045 101109420 -19174892 - L1Md_F2 LINE L1 0 6582 312 1 1356 1131 162 153 28 chr13 101109420 101109674 -19174638 - RLTR21 LTR ERVK -1286 286 1 1 1356 270 312 39 0 chr13 101109954 101110031 -19174281 - PB1D7 SINE Alu -40 80 1 1 1356 411 21 0 0 chr13 101111393 101111441 -19172871 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1356 522 0 0 0 chr13 101111442 101111500 -19172812 + (GA)n Simple_repeat Simple_repeat 1 58 0 1 1356 489 216 113 13 chr13 101112074 101112224 -19172088 + RSINE1 SINE B4 1 165 0 1 1356 224 294 0 0 chr13 101112317 101112368 -19171944 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1356 493 179 0 0 chr13 101112445 101112529 -19171783 + MT2A LTR ERVL 1 84 -449 1 1356 236 337 10 10 chr13 101112529 101112547 -19171765 + MTE2a LTR MaLR 1 102 -277 1 1356 252 0 0 0 chr13 101112547 101112575 -19171737 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1 1356 198 0 0 0 chr13 101112603 101112625 -19171687 + (TTTTC)n Simple_repeat Simple_repeat 3 24 0 1 1356 8004 68 4 18 chr13 101112632 101114000 -19170312 - L1_Mus1 LINE L1 -10 6557 5226 1 1356 572 108 21 0 chr13 101114179 101114272 -19170040 + (TTTC)n Simple_repeat Simple_repeat 2 96 0 1 1356 431 286 8 0 chr13 101114280 101114406 -19169906 - B1_Mus2 SINE Alu -1 146 20 1 1356 201 39 0 0 chr13 101114507 101114533 -19169779 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1356 810 290 31 16 chr13 101114878 101115134 -19169178 + MER2 DNA MER2_type 86 345 0 1 1356 432 130 0 0 chr13 101115167 101115236 -19169076 + (GGA)n Simple_repeat Simple_repeat 2 70 0 1 1356 1703 91 16 4 chr13 101115267 101115520 -19168792 + L1_Mus3 LINE L1 6383 6638 0 1 1356 369 0 0 0 chr13 101115536 101115577 -19168735 + (GA)n Simple_repeat Simple_repeat 2 42 0 1 1356 232 271 35 76 chr13 101116237 101116381 -19167931 + MIR3 SINE MIR 1 138 -70 1 1356 303 250 39 29 chr13 101116424 101116527 -19167785 - RLTR23 LTR ERV1 0 430 327 1 1356 1334 224 42 21 chr13 101116574 101116957 -19167355 + RLTR22_Mur LTR ERVK 409 799 -1049 1 1356 411 272 14 14 chr13 101117016 101117154 -19167158 + RLTR22_Mur LTR ERVK 1579 1716 -132 1 1356 401 326 67 0 chr13 101117356 101117491 -19166821 - RSINE1 SINE B4 -18 147 4 1 1356 394 278 7 71 chr13 101117515 101117670 -19166642 - B1F SINE Alu 0 149 5 1 1356 292 116 0 0 chr13 101117917 101117960 -19166352 + RMER21B LTR ERV1 75 117 -725 1 1356 343 256 143 69 chr13 101117976 101118207 -19166105 + RMER21B LTR ERV1 320 567 -275 1 1356 363 318 46 10 chr13 101119403 101119600 -19164712 + L1_Rod LINE L1 493 696 -6912 1 1356 261 229 144 58 chr13 101119715 101119790 -19164522 + L1_Rod LINE L1 711 789 -6819 1 1356 3962 67 76 8 chr13 101119790 101120314 -19163998 + LTRIS2 LTR ERV1 5 564 0 1 1356 261 229 144 58 chr13 101120314 101120377 -19163935 + L1_Rod LINE L1 790 861 -6747 1 1356 2245 204 29 67 chr13 101120389 101121134 -19163178 + L1_Rod LINE L1 1203 1909 -3974 1 1356 3867 67 45 4 chr13 101121134 101121642 -19162670 + L1Md_F2 LINE L1 6042 6570 -12 1 1356 2089 37 4 0 chr13 101124136 101124382 -19159930 + L1Md_F2 LINE L1 5340 5586 -297 1 1356 7907 49 21 3 chr13 101124382 101125349 -19158963 + L1Md_F2 LINE L1 5587 6570 -12 1 1356 357 215 84 21 chr13 101125673 101125768 -19158544 - ID_B1 SINE B4 -8 216 116 1 1356 3687 193 61 5 chr13 101125928 101127081 -19157231 + Lx5 LINE L1 5197 6423 -627 1 1356 534 291 9 96 chr13 101127266 101127486 -19156826 + ID_B1 SINE B4 3 203 -21 1 1356 1313 128 0 5 chr13 101128273 101128493 -19155819 + RMER19A LTR ERVK 1 219 -518 1 1356 903 232 19 10 chr13 101128709 101128914 -19155398 + B3 SINE B2 1 207 -9 1 1356 4430 69 3 15 chr13 101128920 101129507 -19154805 + L1Md_F2 LINE L1 6002 6581 -1 1 1356 227 54 27 0 chr13 101129575 101129612 -19154700 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 1 1356 1966 131 3 3 chr13 101129782 101130103 -19154209 + ORR1A3 LTR MaLR 1 321 -5 1 1356 231 114 0 0 chr13 101130103 101130138 -19154174 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1 1356 515 212 67 15 chr13 101130926 101131060 -19153252 + B1F SINE Alu 3 143 -6 1 1356 618 241 59 25 chr13 101131895 101132099 -19152213 + B3 SINE B2 5 215 -1 1 1356 259 183 24 0 chr13 101132287 101132369 -19151943 + (TG)n Simple_repeat Simple_repeat 1 84 0 1 1356 23516 131 35 8 chr13 101132919 101134197 -19150115 - Lx LINE L1 -6 6648 5323 1 1356 2819 99 4 66 chr13 101134197 101134649 -19149663 + L1_Mus3 LINE L1 6215 6638 0 1 1356 23516 158 34 9 chr13 101134649 101139485 -19144827 - Lx LINE L1 -561 5322 365 1 1356 422 269 68 14 chr13 101139817 101139964 -19144348 - B4 SINE B4 -136 156 2 1 1356 487 77 39 0 chr13 101140242 101140320 -19143992 + L1Md_F2 LINE L1 6502 6582 0 1 1356 205 156 0 0 chr13 101140344 101140376 -19143936 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1356 672 288 11 22 chr13 101140388 101140569 -19143743 - B3 SINE B2 -13 203 25 1 1356 211 278 120 40 chr13 101140613 101140688 -19143624 - PB1D10 SINE Alu -23 94 14 1 1356 7475 76 20 1 chr13 101141029 101142016 -19142296 - L1_Mm LINE L1 -327 5797 4746 1 1356 6486 66 58 16 chr13 101142016 101142876 -19141436 + L1Md_F2 LINE L1 5674 6569 -13 1 1356 292 239 333 6 chr13 101142890 101143046 -19141266 + ID_B1 SINE B4 1 207 -17 1 1356 352 317 112 16 chr13 101143174 101143299 -19141013 + RSINE1 SINE B4 25 161 -4 2 1356 697 270 44 11 chr13 101143329 101143527 -19140785 - B3 SINE B2 -4 191 7 2 1356 651 271 0 0 chr13 101143615 101143770 -19140542 + B3A SINE B2 2 156 -42 2 1356 306 123 0 0 chr13 101143780 101143837 -19140475 + (CAGA)n Simple_repeat Simple_repeat 4 60 0 2 1356 797 250 32 32 chr13 101144983 101145231 -19139081 + Lx7 LINE L1 7089 7336 -360 2 1356 309 311 11 0 chr13 101145554 101145644 -19138668 - PB1 SINE Alu -2 125 35 2 1356 1201 115 11 16 chr13 101145961 101146147 -19138165 - B2_Mm2 SINE B2 -9 186 2 2 1356 352 360 0 14 chr13 101146509 101146650 -19137662 - ID_B1 SINE B4 0 224 86 2 1356 1086 169 48 5 chr13 101146675 101146883 -19137429 + RLTR20B2 LTR ERVK 1 217 -343 2 1356 260 258 83 73 chr13 101147469 101147565 -19136747 - ID_B1 SINE B4 -57 167 71 2 1356 423 0 0 0 chr13 101147661 101147708 -19136604 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1356 40598 17 2 13 chr13 101150009 101155373 -19128939 + Lx LINE L1 258 5586 -297 2 1356 9040 12 0 0 chr13 101155373 101156369 -19127943 + L1Md_A LINE L1 5587 6582 0 2 1356 40598 105 5 12 chr13 101156369 101157474 -19126838 + Lx LINE L1 5587 6653 -1 2 1356 1106 180 0 10 chr13 101158123 101158319 -19125993 + B3 SINE B2 15 208 -8 2 1356 265 333 0 67 chr13 101158717 101158836 -19125476 - RSINE1 SINE B4 -2 163 53 2 1356 297 0 0 0 chr13 101159462 101159495 -19124817 + (TCTA)n Simple_repeat Simple_repeat 3 35 0 2 1356 1775 74 0 21 chr13 101159583 101159819 -19124493 + L1Md_F2 LINE L1 5357 5587 -296 2 1356 7674 66 2 10 chr13 101159819 101160813 -19123499 + L1Md_F2 LINE L1 5595 6580 -2 2 1356 1184 54 0 13 chr13 101160950 101161099 -19123213 - B1_Mus2 SINE Alu 0 147 1 2 1356 589 215 62 0 chr13 101161324 101161454 -19122858 + B1_Mm SINE Alu 1 138 -9 2 1356 268 289 0 0 chr13 101161634 101161686 -19122626 - B1F SINE Alu -67 82 31 2 1356 306 0 0 0 chr13 101161718 101161752 -19122560 + (TG)n Simple_repeat Simple_repeat 2 35 0 2 1356 468 329 7 0 chr13 101161755 101161901 -19122411 - RSINE1 SINE B4 -16 149 3 2 1356 445 127 0 0 chr13 101162185 101162256 -19122056 + URR1B DNA MER1_type 109 179 -46 2 1356 1008 49 0 0 chr13 101163120 101163242 -19121070 + L1Md_A LINE L1 5465 5586 -297 2 1356 8690 23 2 0 chr13 101163242 101164250 -19120062 + L1Md_A LINE L1 5587 6582 0 2 1356 21 0 0 0 chr13 101165270 101165291 -19119021 + AT_rich Low_complexity Low_complexity 1 21 0 2 1356 291 211 0 78 chr13 101165915 101165992 -19118320 + MMERVK10C-int LTR ERVK 6562 6632 -949 2 1356 1690 156 297 59 chr13 101166041 101166423 -19117889 - RLTR31A_Mm LTR ERVK 0 584 112 2 1356 752 9 25 33 chr13 101166423 101166544 -19117768 + (TTCTC)n Simple_repeat Simple_repeat 5 124 0 2 1356 1690 156 297 59 chr13 101166544 101166632 -19117680 - RLTR31A_Mm LTR ERVK -473 111 3 2 1356 3367 170 3 8 chr13 101167327 101167925 -19116387 - RLTR17 LTR ERVK 0 692 98 2 1356 325 310 17 17 chr13 101168359 101168474 -19115838 - MTD LTR MaLR -304 115 1 2 1356 1830 246 37 5 chr13 101168483 101168916 -19115396 + Lx8 LINE L1 6767 7213 -260 2 1356 327 216 118 81 chr13 101169076 101169212 -19115100 + Lx8 LINE L1 7230 7370 -103 2 1356 786 75 0 0 chr13 101169568 101169674 -19114638 + (TA)n Simple_repeat Simple_repeat 2 107 0 2 1356 4762 41 3 8 chr13 101169678 101170263 -19114049 + L1Md_F2 LINE L1 6001 6582 0 2 1356 1088 95 12 12 chr13 101170297 101170467 -19113845 - B2_Mm2 SINE B2 -24 171 2 2 1356 917 119 56 0 chr13 101170500 101170660 -19113652 + B2_Mm2 SINE B2 1 169 -26 2 1356 966 42 0 0 chr13 101170662 101170781 -19113531 + (GAAA)n Simple_repeat Simple_repeat 3 121 0 2 1356 289 250 0 0 chr13 101170781 101170841 -19113471 + G-rich Low_complexity Low_complexity 1 60 0 2 1356 1347 72 0 0 chr13 101170841 101171021 -19113291 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 2 1356 719 11 33 0 chr13 101171021 101171111 -19113201 + (GGAAA)n Simple_repeat Simple_repeat 1 93 0 2 1356 431 323 25 0 chr13 101171209 101171344 -19112968 - MTE2b LTR MaLR -80 299 162 2 1356 242 269 45 96 chr13 101171346 101171523 -19112789 - L1MB5 LINE L1 -233 5941 5774 2 1356 243 289 0 26 chr13 101171942 101172020 -19112292 - ID_B1 SINE B4 -58 166 91 2 1356 331 242 11 32 chr13 101172707 101172801 -19111511 - PB1D10 SINE Alu 0 117 26 2 1356 994 276 45 18 chr13 101173185 101173511 -19110801 - ORR1E LTR MaLR -11 348 19 2 1356 1268 80 0 10 chr13 101173605 101174012 -19110300 + (TTCC)n Simple_repeat Simple_repeat 1 402 0 2 1356 4721 106 4 34 chr13 101174012 101174748 -19109564 - L1_Mus3 LINE L1 -12 6626 5913 2 1356 3947 126 16 8 chr13 101174748 101175378 -19108934 + L1_Mur1 LINE L1 2167 2801 -3085 2 1356 352 203 27 0 chr13 101175430 101175504 -19108808 + RLTR23 LTR ERV1 350 425 -5 2 1356 1636 268 47 109 chr13 101175542 101176008 -19108304 - MTD-int LTR MaLR -581 677 215 2 1356 4429 191 51 11 chr13 101176008 101176835 -19107477 - RMER13A LTR ERVK 0 860 1 2 1356 1636 268 47 109 chr13 101176835 101176913 -19107399 - MTD-int LTR MaLR -1044 214 161 2 1356 1210 62 0 0 chr13 101176913 101177058 -19107254 - B1_Mm SINE Alu -1 146 2 2 1356 1636 268 47 109 chr13 101177058 101177234 -19107078 - MTD-int LTR MaLR -1098 160 1 2 1356 794 265 128 60 chr13 101177238 101177611 -19106701 - MTD LTR MaLR -4 415 1 2 1356 234 311 14 0 chr13 101177649 101177723 -19106589 + B4A SINE B4 5 79 -213 2 1356 2595 192 64 45 chr13 101177716 101178342 -19105970 - RLTR21 LTR ERVK -934 638 1 2 1356 259 363 11 11 chr13 101178608 101178623 -19105689 - ID_B1 SINE B4 -51 173 82 2 1356 281 299 39 0 chr13 101178623 101178700 -19105612 - PB1D7 SINE Alu -40 80 1 2 1356 241 242 64 40 chr13 101180095 101180220 -19104092 + L1ME2 LINE L1 5894 6021 -143 2 1356 225 250 39 26 chr13 101180424 101180502 -19103810 + ID2 SINE ID 5 83 0 2 1356 459 0 0 0 chr13 101180528 101180579 -19103733 + (TC)n Simple_repeat Simple_repeat 1 51 0 2 1356 387 0 0 0 chr13 101180579 101180621 -19103691 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1356 238 263 137 0 chr13 101181871 101181966 -19102346 - PB1D10 SINE Alu -8 109 2 2 1356 608 236 24 18 chr13 101182196 101182360 -19101952 + RSINE1 SINE B4 1 165 0 2 1356 447 68 0 0 chr13 101182452 101182511 -19101801 + (CA)n Simple_repeat Simple_repeat 2 60 0 2 1356 580 267 7 0 chr13 101182702 101182848 -19101464 - B1_Mus2 SINE Alu 0 147 1 2 1356 321 26 0 0 chr13 101182947 101182985 -19101327 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1356 487 219 0 9 chr13 101183299 101183405 -19100907 + MER2 DNA MER2_type 86 190 -155 2 1356 228 286 30 67 chr13 101184210 101184345 -19099967 + MIR3 SINE MIR 1 130 -78 2 1356 658 228 55 20 chr13 101184528 101184729 -19099583 + RLTR22_Mus LTR ERVK 422 629 -1179 2 1356 378 285 6 60 chr13 101184975 101185143 -19099169 + RNLTR23 LTR ERVK 476 634 -8 2 1356 325 284 0 0 chr13 101185343 101185431 -19098881 + RNERVK23-int LTR ERVK 182 269 -7948 2 1356 243 0 0 0 chr13 101185933 101185960 -19098352 + (A)n Simple_repeat Simple_repeat 1 27 0 2 169 1550 330 62 76 chr13 101185960 101187697 -19096615 + RNERVK23-int LTR ERVK 274 1985 -6232 2 1357 408 186 0 0 chr13 101187697 101187767 -19096545 + tRNA-Lys-AAG tRNA tRNA 1 70 -6 2 1357 351 234 0 0 chr13 101187828 101187905 -19096407 + RNERVK23-int LTR ERVK 4265 4341 -3876 2 1357 2822 260 31 9 chr13 101187924 101188462 -19095850 + RNERVK23-int LTR ERVK 7053 7606 -611 2 1357 261 0 0 0 chr13 101188462 101188491 -19095821 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 1357 2822 260 31 9 chr13 101188491 101188698 -19095614 + RNERVK23-int LTR ERVK 7607 7813 -404 2 1357 422 234 29 71 chr13 101189387 101189557 -19094755 + RNLTR23 LTR ERVK 480 642 0 2 1357 789 179 11 51 chr13 101189557 101189615 -19094697 + RLTR22_Mur LTR ERVK 608 659 -1189 2 1357 2988 40 16 226 chr13 101189615 101190167 -19094145 + RLTR10C LTR ERVK 1 436 0 2 1357 789 179 11 51 chr13 101190167 101190283 -19094029 + RLTR22_Mur LTR ERVK 660 775 -1073 2 1357 1550 39 0 0 chr13 101190292 101190470 -19093842 + B2_Mm1a SINE B2 2 179 -14 2 1357 312 27 0 0 chr13 101190472 101190509 -19093803 + (GAAAA)n Simple_repeat Simple_repeat 3 39 0 2 1357 414 230 8 53 chr13 101190607 101190643 -19093669 + RLTR22_Mur LTR ERVK 1590 1625 -223 2 1357 3337 41 2 8 chr13 101190643 101191040 -19093272 - MTA_Mm LTR MaLR 0 396 2 2 1357 414 230 8 53 chr13 101191040 101191136 -19093176 + RLTR22_Mur LTR ERVK 1626 1715 -133 2 1357 405 357 29 0 chr13 101191314 101191454 -19092858 - RSINE1 SINE B4 -18 147 4 2 1357 493 199 26 90 chr13 101191478 101191633 -19092679 - B1F SINE Alu 0 149 5 2 1357 369 130 0 0 chr13 101191868 101191922 -19092390 + RMER21B LTR ERV1 75 128 -714 2 1357 393 283 131 60 chr13 101191897 101192149 -19092163 + RMER21B LTR ERV1 298 567 -275 2 1357 1263 60 6 0 chr13 101192186 101192353 -19091959 - L1Md_F2 LINE L1 -12 6570 6403 2 1357 208 330 47 9 chr13 101192698 101192805 -19091507 + MIR SINE MIR 118 228 -34 2 1357 442 274 51 55 chr13 101193501 101193756 -19090556 + L1_Rod LINE L1 60 313 -6859 2 1357 903 184 28 0 chr13 101193939 101194156 -19090156 + L1_Rod LINE L1 1203 1425 -4422 2 1357 1001 198 55 79 chr13 101194171 101194389 -19089923 + Lx9 LINE L1 7322 7525 -119 2 1357 456 111 0 0 chr13 101194389 101194461 -19089851 + (TA)n Simple_repeat Simple_repeat 1 72 0 2 1357 1001 198 55 79 chr13 101194461 101194571 -19089741 + Lx9 LINE L1 7526 7642 -2 2 1357 381 338 19 16 chr13 101194752 101194957 -19089355 + B3A SINE B2 9 210 -6 2 1357 365 204 84 21 chr13 101198319 101198414 -19085898 - ID_B1 SINE B4 -8 216 116 2 1357 347 337 47 62 chr13 101198562 101198755 -19085557 + ID_B1 SINE B4 31 220 -4 2 1357 2188 159 12 20 chr13 101199518 101199922 -19084390 + RMER19A LTR ERVK 1 401 -336 2 1357 919 240 15 10 chr13 101200138 101200344 -19083968 + B3 SINE B2 1 207 -9 2 1357 1181 75 0 0 chr13 101200402 101200549 -19083763 + B1_Mus1 SINE Alu 2 148 0 2 1357 291 54 0 0 chr13 101200629 101200666 -19083646 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2 1357 477 76 0 0 chr13 101200802 101200868 -19083444 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1357 1826 140 64 22 chr13 101200891 101201205 -19083107 + ORR1A2 LTR MaLR 1 327 0 2 1357 221 257 42 14 chr13 101201825 101201896 -19082416 + BC1_Mm scRNA scRNA 14 86 -66 2 1357 558 201 52 15 chr13 101202005 101202141 -19082171 + B1F SINE Alu 3 143 -6 2 1357 220 245 19 0 chr13 101202700 101202753 -19081559 + L2a LINE L2 3303 3356 -70 2 1357 715 204 52 6 chr13 101202916 101203089 -19081223 + B3 SINE B2 4 184 -32 2 1357 345 47 0 0 chr13 101203092 101203135 -19081177 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1357 875 117 0 22 chr13 101203362 101203546 -19080766 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1357 217 311 73 40 chr13 101204360 101204484 -19079828 - B1_Mur4 SINE Alu -22 128 1 3 1357 377 300 33 16 chr13 101204484 101204546 -19079766 - B4 SINE B4 -204 88 25 3 1357 298 272 0 129 chr13 101204813 101204906 -19079406 - PB1D10 SINE Alu -23 94 14 3 1357 296 259 283 6 chr13 101205298 101205457 -19078855 + ID_B1 SINE B4 5 207 -17 3 1357 372 313 59 30 chr13 101205589 101205724 -19078588 + RSINE1 SINE B4 25 163 -2 3 1357 767 224 69 15 chr13 101205759 101205963 -19078349 - B3 SINE B2 0 216 2 3 1357 874 226 0 0 chr13 101206038 101206197 -19078115 + B3A SINE B2 2 160 -38 3 1357 1269 0 0 0 chr13 101206203 101206344 -19077968 + (GGGAGA)n Simple_repeat Simple_repeat 4 144 0 3 1357 231 61 0 0 chr13 101207451 101207484 -19076828 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1357 843 258 18 9 chr13 101207493 101207712 -19076600 + Lx7 LINE L1 7087 7307 -389 3 1357 21 36 0 0 chr13 101207860 101207888 -19076424 + AT_rich Low_complexity Low_complexity 1 28 0 3 1357 401 91 76 0 chr13 101207934 101208000 -19076312 + B2_Mm2 SINE B2 111 181 -14 3 1357 245 281 110 0 chr13 101208116 101208198 -19076114 - PB1 SINE Alu -2 125 35 3 1357 1194 68 0 0 chr13 101208536 101208684 -19075628 + B1_Mus1 SINE Alu 1 148 0 3 1357 1011 118 49 6 chr13 101208778 101208940 -19075372 - B2_Mm2 SINE B2 -25 170 2 3 1357 342 333 0 16 chr13 101209302 101209427 -19074885 - ID_B1 SINE B4 0 224 102 3 1357 1964 193 106 35 chr13 101209477 101209997 -19074315 + RLTR20B2 LTR ERVK 4 560 0 3 1357 203 347 10 10 chr13 101210603 101210702 -19073610 + CT-rich Low_complexity Low_complexity 1 99 0 3 1357 1410 113 13 21 chr13 101210712 101210948 -19073364 + BGLII LTR ERVK 188 421 0 3 1357 28 0 0 0 chr13 101211265 101211293 -19073019 + AT_rich Low_complexity Low_complexity 1 28 0 3 1357 340 266 18 44 chr13 101211300 101211414 -19072898 + PB1D10 SINE Alu 7 117 0 3 1357 252 86 0 0 chr13 101211463 101211498 -19072814 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1357 288 247 83 73 chr13 101212279 101212375 -19071937 - ID_B1 SINE B4 -57 167 71 3 1357 724 229 49 5 chr13 101212534 101212718 -19071594 + B4A SINE B4 11 202 -90 3 1357 192 77 0 0 chr13 101212781 101212807 -19071505 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1357 3929 85 16 20 chr13 101212896 101213450 -19070862 + Lx LINE L1 6103 6654 0 3 1357 282 215 77 0 chr13 101214801 101214866 -19069446 + RSINE1 SINE B4 67 136 -29 3 1357 219 36 0 0 chr13 101215134 101215162 -19069150 + (TTGG)n Simple_repeat Simple_repeat 2 29 0 3 1357 1024 92 103 6 chr13 101215525 101215699 -19068613 - RMER17A2 LTR ERVK -4 902 712 3 1357 1043 144 84 0 chr13 101215793 101215960 -19068352 + B2_Mm2 SINE B2 1 181 -14 3 1357 422 73 0 0 chr13 101215973 101216028 -19068284 + B2_Mm2 SINE B2 47 101 -94 3 1357 897 10 0 0 chr13 101216067 101216169 -19068143 + (GAA)n Simple_repeat Simple_repeat 3 104 0 3 1357 447 204 10 20 chr13 101216979 101217079 -19067233 + B1_Mur3 SINE Alu 14 112 -37 3 1357 231 279 16 47 chr13 101217075 101217139 -19067173 - PB1D10 SINE Alu -25 92 31 3 1357 527 279 57 19 chr13 101217172 101217329 -19066983 - RSINE1 SINE B4 0 165 3 3 1357 994 162 101 38 chr13 101217445 101217748 -19066564 + IAPEY3_LTR LTR ERVK 1 386 -4 3 1357 1017 201 19 5 chr13 101217865 101218075 -19066237 + URR1B DNA MER1_type 13 225 0 3 1357 388 276 0 11 chr13 101218171 101218259 -19066053 + RMER15-int LTR ERVL 4562 4648 -351 3 1357 679 226 0 0 chr13 101218260 101218384 -19065928 + B1_Mur1 SINE Alu 3 126 -23 3 1357 588 258 31 113 chr13 101218443 101218891 -19065421 - MTD LTR MaLR -15 404 5 3 1357 2313 261 62 32 chr13 101218897 101219003 -19065309 + Lx8 LINE L1 6743 6850 -623 3 1357 3589 36 0 0 chr13 101219003 101219421 -19064891 + L1Md_T LINE L1 6165 6582 0 3 1357 2313 261 62 32 chr13 101219421 101220022 -19064290 + Lx8 LINE L1 6851 7471 -2 3 1357 1037 97 100 74 chr13 101220215 101220405 -19063907 + B2_Mm2 SINE B2 1 195 0 3 1357 408 323 31 0 chr13 101220511 101220641 -19063671 - MTE2b LTR MaLR -80 299 166 3 1357 270 291 58 37 chr13 101220642 101220831 -19063481 - L1MB8 LINE L1 -230 5948 5756 3 1357 231 308 0 25 chr13 101221253 101221333 -19062979 - ID_B1 SINE B4 -58 166 89 3 1357 332 236 22 33 chr13 101221996 101222088 -19062224 - PB1D10 SINE Alu 0 117 27 3 1357 688 104 0 0 chr13 101222172 101222278 -19062034 + B2_Mm2 SINE B2 2 107 -88 3 1357 1099 263 49 13 chr13 101222683 101222987 -19061325 - ORR1E LTR MaLR -11 348 34 3 1357 323 136 309 0 chr13 101223395 101223476 -19060836 - RMER15 LTR ERVL -2 573 468 3 1357 270 273 12 49 chr13 101223473 101223554 -19060758 + B1_Mm SINE Alu 69 146 -1 3 1357 487 206 69 40 chr13 101223559 101223660 -19060652 + B3A SINE B2 1 104 -94 3 1357 237 65 0 0 chr13 101223661 101223692 -19060620 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3 1357 1489 219 157 13 chr13 101223701 101224095 -19060217 - RMER15 LTR ERVL -96 479 29 3 1357 1252 84 28 11 chr13 101224385 101224565 -19059747 + B2_Mm2 SINE B2 2 184 -11 3 1357 669 186 41 35 chr13 101224710 101224855 -19059457 - B1_Mm SINE Alu 0 147 2 3 1357 1664 220 54 19 chr13 101225051 101225421 -19058891 - MTD LTR MaLR -18 401 19 3 1357 285 29 0 0 chr13 101225424 101225458 -19058854 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1357 279 0 0 0 chr13 101225528 101225559 -19058753 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 3 1357 228 35 0 0 chr13 101225594 101225623 -19058689 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1357 305 347 83 0 chr13 101225624 101225745 -19058567 - B1F SINE Alu -15 134 4 3 1357 2045 135 47 11 chr13 101225779 101226138 -19058174 + Lx LINE L1 6277 6648 -6 3 1357 1415 70 21 0 chr13 101226149 101226336 -19057976 - B2_Mm1t SINE B2 -2 191 1 3 1357 246 217 126 55 chr13 101226394 101226521 -19057791 - HAL1 LINE L1 -1141 1366 1231 3 1357 263 246 13 76 chr13 101226616 101226695 -19057617 - tRNA-Ala-GCY_ tRNA tRNA -1 74 1 3 1357 318 229 57 0 chr13 101226626 101226696 -19057616 - ID4 SINE ID -4 79 6 3 1357 347 273 90 10 chr13 101226717 101226835 -19057477 - B1F1 SINE Alu -21 128 1 3 1357 350 240 56 37 chr13 101226866 101226974 -19057338 - PB1D10 SINE Alu -7 110 1 3 1357 617 121 0 0 chr13 101226981 101227072 -19057240 - B1_Mus2 SINE Alu 0 147 57 3 1357 256 260 13 64 chr13 101227016 101227094 -19057218 - MT2B2 LTR ERVL -320 264 191 3 1357 569 225 6 155 chr13 101227213 101227307 -19057005 - B1_Mur4 SINE Alu 0 150 66 3 1357 1207 54 0 0 chr13 101227307 101227454 -19056858 + B1_Mus2 SINE Alu 1 147 0 3 1357 569 225 6 155 chr13 101227454 101227527 -19056785 - B1_Mur4 SINE Alu -85 65 8 3 1357 1291 160 18 0 chr13 101227750 101227969 -19056343 + URR1A DNA MER1_type 1 223 -3 3 1357 305 282 27 59 chr13 101227982 101228169 -19056143 - L1M2 LINE L1 -4276 2573 2422 3 1357 302 310 168 48 chr13 101228202 101228677 -19055635 - L1M2 LINE L1 -4886 1964 1433 3 1357 316 0 45 0 chr13 101229666 101229710 -19054602 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 3 1357 1512 58 16 0 chr13 101229723 101229913 -19054399 - B2_Mm2 SINE B2 -1 194 2 3 1357 550 255 80 30 chr13 101229988 101230196 -19054116 - MTD LTR MaLR 0 421 196 3 1357 189 0 0 0 chr13 101230630 101230651 -19053661 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1357 596 305 112 10 chr13 101230657 101230862 -19053450 + B4 SINE B4 67 292 0 3 1357 279 54 0 0 chr13 101230866 101230903 -19053409 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1357 402 253 33 0 chr13 101230966 101231057 -19053255 + PB1 SINE Alu 27 120 -7 3 1357 277 253 232 38 chr13 101232031 101232216 -19052096 - Lx8 LINE L1 -33 7440 7220 3 1357 413 219 156 39 chr13 101232228 101232315 -19051997 - B1_Mur2 SINE Alu -6 143 56 3 1357 180 77 0 0 chr13 101232315 101232341 -19051971 + (TCTCTG)n Simple_repeat Simple_repeat 2 27 0 3 1357 413 219 156 39 chr13 101232341 101232381 -19051931 - B1_Mur2 SINE Alu -94 55 1 3 1357 487 225 26 18 chr13 101232497 101232610 -19051702 - PB1D9 SINE Alu 0 120 7 3 1357 237 381 0 35 chr13 101232722 101232809 -19051503 - ID_B1 SINE B4 -57 167 84 3 1357 537 273 78 0 chr13 101232832 101232960 -19051352 - RSINE1 SINE B4 -24 141 4 3 1357 256 184 79 0 chr13 101232969 101233045 -19051267 - L1M4 LINE L1 -2853 3293 3212 3 1357 247 238 125 5 chr13 101233187 101233383 -19050929 + L1MEg LINE L1 1538 1774 -4234 3 1357 258 326 46 8 chr13 101233424 101233554 -19050758 + LTR16D LTR ERVL 24 158 -517 3 1357 295 260 49 61 chr13 101233608 101233690 -19050622 + ID4_ SINE ID 2 82 -1 3 1357 290 352 37 0 chr13 101233690 101233716 -19050596 + B4A SINE B4 2 113 -179 3 1357 632 243 20 7 chr13 101233709 101233858 -19050454 + RSINE1 SINE B4 6 156 -9 3 1357 369 43 0 0 chr13 101233874 101233921 -19050391 + (CAGA)n Simple_repeat Simple_repeat 3 49 0 3 1357 449 341 124 19 chr13 101233923 101234189 -19050123 + LTR16D LTR ERVL 356 649 -2 3 1357 296 205 0 60 chr13 101234385 101234468 -19049844 + L1M5 LINE L1 2129 2206 -3940 3 1357 234 307 93 0 chr13 101234477 101234552 -19049760 + ID4_ SINE ID 2 83 0 3 1357 364 108 48 0 chr13 101234703 101234786 -19049526 + (TCTCTG)n Simple_repeat Simple_repeat 4 90 0 3 1357 255 299 0 0 chr13 101234786 101234853 -19049459 - tRNA-Ala-GCA tRNA tRNA -8 67 1 3 1357 684 307 67 53 chr13 101235012 101235370 -19048942 - MTE2a LTR MaLR 0 379 17 4 1357 955 136 20 13 chr13 101235642 101235791 -19048521 - B1_Mur4 SINE Alu 0 150 1 4 1357 1865 142 88 17 chr13 101236103 101236455 -19047857 + RLTR14 LTR ERV1 3 379 -3 4 1357 855 271 95 41 chr13 101236472 101236675 -19047637 + L1M2 LINE L1 5382 5605 -692 4 1357 596 153 155 39 chr13 101236675 101236804 -19047508 + B1_Mur3 SINE Alu 1 144 -5 4 1357 855 271 95 41 chr13 101236804 101237012 -19047300 + L1M2 LINE L1 5606 5815 -482 4 1357 374 214 26 97 chr13 101237012 101237028 -19047284 + MT2B LTR ERVL 152 159 -442 4 1357 625 183 39 0 chr13 101237028 101237132 -19047180 + B1_Mus1 SINE Alu 2 109 -39 4 1357 279 0 0 0 chr13 101237168 101237199 -19047113 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1357 189 0 0 0 chr13 101237610 101237631 -19046681 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4 1357 27 29 0 0 chr13 101237658 101237692 -19046620 + AT_rich Low_complexity Low_complexity 1 34 0 4 1357 378 0 0 0 chr13 101237784 101237826 -19046486 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1357 823 248 5 67 chr13 101238304 101238512 -19045800 + B3A SINE B2 1 195 -3 4 1357 189 0 0 0 chr13 101238574 101238595 -19045717 + (TG)n Simple_repeat Simple_repeat 2 22 0 4 1357 647 227 23 8 chr13 101239238 101239367 -19044945 + ID_B1 SINE B4 78 208 -16 4 1357 3071 175 160 5 chr13 101239604 101240366 -19043946 + Lx9 LINE L1 6596 7475 -169 4 1357 1119 95 0 0 chr13 101240459 101240606 -19043706 - B1_Mus2 SINE Alu 0 147 1 4 1357 24 0 0 0 chr13 101240915 101240939 -19043373 + AT_rich Low_complexity Low_complexity 1 24 0 4 1357 7275 68 9 2 chr13 101241018 101242380 -19041932 - L1Md_F2 LINE L1 0 6582 5211 4 1357 333 0 0 0 chr13 101242384 101242421 -19041891 + (TTA)n Simple_repeat Simple_repeat 2 38 0 4 1357 1205 48 0 7 chr13 101242603 101242751 -19041561 + B1_Mus2 SINE Alu 1 147 0 4 1357 233 302 19 0 chr13 101242871 101242924 -19041388 + ID4_ SINE ID 2 55 -28 4 1357 706 201 97 0 chr13 101242985 101243119 -19041193 + B1_Mur4 SINE Alu 1 147 -3 4 1357 229 238 0 0 chr13 101243207 101243249 -19041063 + B3 SINE B2 6 47 -169 4 1357 632 150 0 0 chr13 101243493 101243593 -19040719 - B1_Mur4 SINE Alu 0 150 51 4 1357 389 302 15 172 chr13 101243730 101243934 -19040378 - B4A SINE B4 -1 291 120 4 1357 214 259 127 49 chr13 101243941 101244083 -19040229 - B4A SINE B4 -139 153 1 4 1357 550 348 74 56 chr13 101244113 101244462 -19039850 - HAL1 LINE L1 -484 2023 1673 4 1357 595 245 37 25 chr13 101244462 101244625 -19039687 - RSINE1 SINE B4 0 165 1 4 1357 550 348 74 56 chr13 101244625 101244777 -19039535 - HAL1 LINE L1 -835 1672 1514 4 1357 337 301 167 42 chr13 101245164 101245403 -19038909 + L1MC LINE L1 5555 5823 -2059 4 1357 1269 263 18 18 chr13 101245444 101245730 -19038582 - B4A SINE B4 -1 291 6 4 1357 23 33 0 0 chr13 101245780 101245810 -19038502 + AT_rich Low_complexity Low_complexity 1 30 0 4 1357 416 289 113 24 chr13 101246076 101246200 -19038112 - B3 SINE B2 -81 135 1 4 1357 306 243 54 0 chr13 101246635 101246709 -19037603 - ID4 SINE ID -2 81 4 4 1357 741 145 16 0 chr13 101247220 101247344 -19036968 + B1_Mur1 SINE Alu 24 149 0 4 1357 333 254 48 103 chr13 101247223 101247368 -19036944 + B4A SINE B4 112 248 -44 4 1357 613 253 39 33 chr13 101247535 101247715 -19036597 - B3A SINE B2 -16 182 2 4 1357 303 265 53 20 chr13 101247715 101247865 -19036447 - L1MEc LINE L1 -5318 1082 928 4 1357 241 323 35 0 chr13 101247968 101248038 -19036274 - B1F1 SINE Alu -16 104 31 4 1357 193 198 55 0 chr13 101248460 101248551 -19035761 + (TA)n Simple_repeat Simple_repeat 2 97 0 4 1357 400 304 0 0 chr13 101248634 101248726 -19035586 - B1F SINE Alu -54 95 4 4 1357 227 242 16 0 chr13 101248766 101248828 -19035484 - L1MC LINE L1 -1990 5892 5830 4 1357 853 185 22 3 chr13 101248939 101249116 -19035196 + B3 SINE B2 1 190 -5 4 1357 745 154 0 0 chr13 101249603 101249720 -19034592 + PB1D9 SINE Alu 2 118 -2 4 1357 1184 119 11 17 chr13 101249882 101250061 -19034251 + B2_Mm1t SINE B2 2 179 -14 4 1357 399 103 313 70 chr13 101250120 101250235 -19034077 + B2_Mm2 SINE B2 47 189 -6 4 1357 944 75 0 29 chr13 101251271 101251408 -19032904 + L1_Mus1 LINE L1 6434 6566 -1 4 1357 372 257 0 0 chr13 101251627 101251697 -19032615 - PB1D10 SINE Alu -31 86 17 4 1357 647 210 43 7 chr13 101251833 101251972 -19032340 + B1_Mus1 SINE Alu 5 148 0 4 1357 522 222 77 0 chr13 101252129 101252246 -19032066 + ID_B1 SINE B4 78 203 -21 4 1357 333 298 91 8 chr13 101252137 101252269 -19032043 + B1F SINE Alu 5 147 -2 4 1357 239 204 18 36 chr13 101252269 101252325 -19031987 + GA-rich Low_complexity Low_complexity 2 56 0 4 1357 954 132 0 0 chr13 101252325 101252484 -19031828 + (GGAA)n Simple_repeat Simple_repeat 2 160 0 4 1357 596 300 42 16 chr13 101252487 101252680 -19031632 + B3A SINE B2 1 198 0 4 1357 1476 59 16 0 chr13 101252697 101252884 -19031428 + B2_Mm2 SINE B2 1 190 -5 4 1357 565 216 0 43 chr13 101253167 101253283 -19031029 - PB1D9 SINE Alu -1 119 9 4 1357 278 233 40 140 chr13 101253200 101253300 -19031012 - MT2B LTR ERVL -360 241 152 4 1357 271 189 88 0 chr13 101253432 101253493 -19030819 + B1F SINE Alu 46 117 0 4 1357 21 0 0 0 chr13 101253527 101253548 -19030764 + AT_rich Low_complexity Low_complexity 1 21 0 4 1357 25 31 0 0 chr13 101253577 101253609 -19030703 + AT_rich Low_complexity Low_complexity 1 32 0 4 1357 299 259 134 22 chr13 101253839 101253973 -19030339 - B1F SINE Alu 0 149 1 4 1357 733 267 77 5 chr13 101254711 101254907 -19029405 - B3 SINE B2 -6 210 1 4 1357 1814 151 130 6 chr13 101254987 101255333 -19028979 + ORR1B1 LTR MaLR 1 389 -5 4 1357 485 225 81 0 chr13 101255601 101255712 -19028600 - B3A SINE B2 -59 139 20 4 1357 420 286 25 0 chr13 101256619 101256738 -19027574 - B1F2 SINE Alu -11 138 17 4 1357 397 181 135 21 chr13 101257089 101257185 -19027127 + B1_Mur3 SINE Alu 43 149 0 4 1357 992 154 197 0 chr13 101257304 101257492 -19026820 + URR1B DNA MER1_type 1 225 0 4 1357 230 250 102 91 chr13 101257523 101257611 -19026701 - B1_Mus2 SINE Alu -6 141 53 4 1357 236 190 65 65 chr13 101257581 101257643 -19026669 - RSINE1 SINE B4 -24 141 80 4 1357 684 265 114 0 chr13 101257661 101257827 -19026485 - B3 SINE B2 0 216 32 4 1357 213 241 36 18 chr13 101257832 101257887 -19026425 - RSINE1 SINE B4 -107 58 3 4 1357 267 31 0 0 chr13 101257888 101257920 -19026392 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 4 1357 338 300 59 54 chr13 101258159 101258513 -19025799 + RMER20A LTR ERVK 207 547 -80 4 1357 323 255 79 18 chr13 101259558 101259722 -19024590 + L1M4 LINE L1 5648 5821 -357 4 1357 332 202 240 16 chr13 101260259 101260380 -19023932 + B1_Mus1 SINE Alu 1 148 0 4 1357 466 141 87 48 chr13 101260845 101260949 -19023363 + B1_Mus1 SINE Alu 41 148 0 4 1357 4764 58 21 2 chr13 101260975 101261597 -19022715 + L1_Mus3 LINE L1 5995 6628 -10 4 1357 868 143 20 20 chr13 101261620 101261757 -19022555 + B1_Mur4 SINE Alu 1 138 -12 4 1357 198 0 0 0 chr13 101261757 101261779 -19022533 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 4 1357 868 143 20 20 chr13 101261779 101261791 -19022521 + B1_Mur4 SINE Alu 139 150 0 4 1357 981 197 35 5 chr13 101262809 101263008 -19021304 - B3 SINE B2 -11 205 1 4 1357 341 320 31 0 chr13 101263984 101264081 -19020231 + PB1D10 SINE Alu 3 102 -15 4 1357 202 200 0 0 chr13 101264087 101264122 -19020190 + CT-rich Low_complexity Low_complexity 3 37 0 4 1357 631 182 39 55 chr13 101264269 101264397 -19019915 - B1_Mur3 SINE Alu 0 149 24 4 1357 948 99 84 45 chr13 101264410 101264589 -19019723 + B2_Mm2 SINE B2 2 187 -8 4 1357 1104 56 0 0 chr13 101264606 101264748 -19019564 + B1_Mus2 SINE Alu 6 147 0 4 1357 768 153 93 6 chr13 101264743 101264902 -19019410 - B2_Mm2 SINE B2 -14 179 2 4 1357 3648 151 54 55 chr13 101265023 101265712 -19018600 + RMER19B LTR ERVK 1 688 -214 4 1357 244 343 56 35 chr13 101266268 101266410 -19017902 + MIR SINE MIR 51 195 -67 4 1357 319 202 48 81 chr13 101267009 101267133 -19017179 + PB1D9 SINE Alu 1 120 0 4 1357 21 57 0 0 chr13 101267273 101267308 -19017004 + AT_rich Low_complexity Low_complexity 1 35 0 4 1357 23 54 0 0 chr13 101267478 101267515 -19016797 + AT_rich Low_complexity Low_complexity 1 37 0 4 1357 590 185 65 22 chr13 101268199 101268337 -19015975 + B1_Mur4 SINE Alu 7 150 0 4 1357 1208 61 0 0 chr13 101268925 101269073 -19015239 + B1_Mus1 SINE Alu 1 148 0 4 1357 258 19 0 129 chr13 101269160 101269222 -19015090 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 4 1357 1196 109 17 6 chr13 101269272 101269448 -19014864 - B2_Mm2 SINE B2 -17 178 1 4 1357 229 115 113 16 chr13 101269510 101269572 -19014740 + Lx7 LINE L1 7613 7680 -16 4 1357 24 32 0 0 chr13 101269989 101270020 -19014292 + AT_rich Low_complexity Low_complexity 1 31 0 4 1357 565 241 27 27 chr13 101270022 101270171 -19014141 + RSINE1 SINE B4 2 150 -15 4 1357 305 156 20 20 chr13 101270233 101270331 -19013981 + (CATA)n Simple_repeat Simple_repeat 1 98 0 4 1357 606 256 36 124 chr13 101270412 101270662 -19013650 + B4A SINE B4 2 229 -63 4 1357 213 39 0 0 chr13 101270665 101270691 -19013621 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1357 459 184 0 0 chr13 101270881 101271022 -19013290 + (CA)n Simple_repeat Simple_repeat 1 141 0 4 1357 334 93 91 18 chr13 101271029 101271084 -19013228 + HAL1-3A_ME LINE L1 1976 2034 -824 5 1357 356 274 46 134 chr13 101271180 101271201 -19013111 + B4A SINE B4 65 141 -151 5 1357 879 137 14 10 chr13 101271201 101271350 -19012962 + B1_Mus1 SINE Alu 1 148 0 5 1357 356 274 46 134 chr13 101271350 101271374 -19012938 + B4A SINE B4 142 241 -51 5 1357 2417 141 167 46 chr13 101271554 101271804 -19012508 + RLTR31A_Mm LTR ERVK 1 256 -328 5 1357 1341 94 21 0 chr13 101271804 101271995 -19012317 - B2_Mm2 SINE B2 0 195 1 5 1357 2417 141 167 46 chr13 101271995 101272265 -19012047 + RLTR31A_Mm LTR ERVK 257 584 0 5 1357 405 263 0 50 chr13 101272427 101272547 -19011765 + PB1D9 SINE Alu 2 115 -5 5 1357 1031 107 0 13 chr13 101272712 101272863 -19011449 + B1_Mur4 SINE Alu 2 150 0 5 1357 1244 41 0 0 chr13 101273001 101273148 -19011164 + B1_Mus2 SINE Alu 1 147 0 5 1357 1561 37 16 5 chr13 101273268 101273459 -19010853 - B2_Mm2 SINE B2 -2 193 1 5 1357 1141 64 0 0 chr13 101273758 101273898 -19010414 + B1_Mus1 SINE Alu 2 141 -7 5 1357 742 58 24 16 chr13 101273898 101274021 -19010291 + (GAGAA)n Simple_repeat Simple_repeat 4 127 0 5 1357 289 253 23 0 chr13 101274365 101274452 -19009860 + PB1D10 SINE Alu 18 106 -11 5 1357 278 50 25 0 chr13 101274595 101274635 -19009677 + (GAA)n Simple_repeat Simple_repeat 2 42 0 5 1357 255 61 0 0 chr13 101275089 101275122 -19009190 + (TCTCCC)n Simple_repeat Simple_repeat 5 37 0 5 1357 660 171 106 0 chr13 101275141 101275264 -19009048 - B1_Mus1 SINE Alu -1 147 12 5 1357 720 253 42 21 chr13 101275273 101275463 -19008849 - B3 SINE B2 -3 213 20 5 1357 536 259 25 33 chr13 101275608 101275728 -19008584 - B1_Mus2 SINE Alu -24 123 5 5 1357 216 0 0 0 chr13 101275880 101275904 -19008408 + (GA)n Simple_repeat Simple_repeat 1 24 0 5 1357 566 303 7 0 chr13 101275935 101276077 -19008235 + ID_B1 SINE B4 81 223 -1 5 1357 257 322 95 40 chr13 101276467 101276593 -19007719 + 7SK RNA RNA 18 150 -181 5 1357 639 48 0 0 chr13 101276712 101276795 -19007517 + (CA)n Simple_repeat Simple_repeat 2 84 0 5 1357 304 306 0 0 chr13 101277145 101277217 -19007095 + ID4_ SINE ID 1 72 -11 5 1357 186 71 0 0 chr13 101277406 101277434 -19006878 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1357 1295 113 11 0 chr13 101277817 101277994 -19006318 + B2_Mm1t SINE B2 1 179 -14 5 1357 477 163 42 10 chr13 101278120 101278224 -19006088 + B1_Mur3 SINE Alu 2 147 -2 5 1357 5025 60 33 8 chr13 101278336 101279056 -19005256 + MusHAL1 LINE L1 186 923 -1789 5 1357 294 280 0 0 chr13 101279214 101279289 -19005023 - PB1D10 SINE Alu -16 101 27 5 1357 21 0 0 0 chr13 101279995 101280016 -19004296 + AT_rich Low_complexity Low_complexity 1 21 0 5 1357 21 57 0 0 chr13 101280167 101280202 -19004110 + AT_rich Low_complexity Low_complexity 1 35 0 5 1357 652 152 184 0 chr13 101280472 101280597 -19003715 + B1_Mus1 SINE Alu 1 148 0 5 1357 236 95 24 0 chr13 101280599 101280633 -19003679 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 5 1357 1257 90 0 0 chr13 101280633 101280810 -19003502 + (GGAGA)n Simple_repeat Simple_repeat 2 178 0 5 1357 236 95 24 0 chr13 101280810 101280817 -19003495 + (GAAA)n Simple_repeat Simple_repeat 1 7 0 5 1357 216 0 0 0 chr13 101281971 101281995 -19002317 + (TG)n Simple_repeat Simple_repeat 2 25 0 5 1357 293 343 71 0 chr13 101282019 101282118 -19002194 + PB1D7 SINE Alu 5 110 -10 5 1357 3319 41 8 0 chr13 101282125 101282518 -19001794 + MTA_Mm LTR MaLR 1 396 0 5 1357 213 39 0 0 chr13 101283003 101283029 -19001283 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1357 687 53 11 0 chr13 101283029 101283124 -19001188 - B2_Mm2 SINE B2 -93 102 7 5 1357 540 257 29 14 chr13 101283393 101283531 -19000781 - ID_B1 SINE B4 -7 217 78 5 1357 601 147 191 0 chr13 101283566 101283702 -19000610 + MTC LTR MaLR 252 413 -8 5 1357 3566 163 48 24 chr13 101283705 101284633 -18999679 + MTC-int LTR MaLR 2 1063 -195 5 1357 1438 80 16 0 chr13 101284633 101284820 -18999492 + B2_Mm2 SINE B2 1 190 -5 5 1357 1524 187 116 70 chr13 101284820 101284864 -18999448 + MTC-int LTR MaLR 1064 1103 -155 5 1357 1524 164 120 8 chr13 101285228 101285579 -18998733 + RMER10A LTR ERVL 53 442 0 5 1357 261 0 0 0 chr13 101285837 101285866 -18998446 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1357 210 295 77 33 chr13 101285893 101285984 -18998328 + MIRb SINE MIR 111 205 -63 5 1357 284 283 33 33 chr13 101286596 101286782 -18997530 + L2c LINE L2 3032 3215 -160 5 1357 186 329 14 0 chr13 101286901 101286971 -18997341 - MIRc SINE MIR -120 148 78 5 1357 327 247 117 11 chr13 101287042 101287136 -18997176 + RSINE1 SINE B4 4 107 -58 5 1357 22 0 0 0 chr13 101287163 101287185 -18997127 + AT_rich Low_complexity Low_complexity 1 22 0 5 1357 239 148 0 85 chr13 101287590 101287649 -18996663 + 4.5SRNA scRNA scRNA 33 86 -8 5 1357 692 101 9 0 chr13 101287597 101287706 -18996606 + B1_Mur3 SINE Alu 39 148 -1 5 1357 212 171 0 0 chr13 101288454 101288495 -18995817 + T-rich Low_complexity Low_complexity 3 43 0 5 1357 1010 92 7 7 chr13 101288497 101288640 -18995672 - B1_Mus2 SINE Alu 0 147 5 5 1357 210 314 29 0 chr13 101289218 101289320 -18994992 + MER5A DNA MER1_type 61 165 -24 5 1357 224 79 0 50 chr13 101289539 101289579 -18994733 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 5 1357 256 308 43 21 chr13 101290065 101290158 -18994154 + Tigger5 DNA MER2_type 2310 2404 -2 5 1357 1016 74 61 0 chr13 101290317 101290465 -18993847 + B2_Mm2 SINE B2 1 157 -38 5 1357 624 91 0 0 chr13 101290465 101290553 -18993759 + (TAGA)n Simple_repeat Simple_repeat 1 88 0 5 1357 276 30 0 0 chr13 101290653 101290686 -18993626 + (TTGG)n Simple_repeat Simple_repeat 2 34 0 5 1357 776 151 14 48 chr13 101291291 101291437 -18992875 + B1_Mur4 SINE Alu 9 149 -1 5 1357 243 347 0 0 chr13 101292164 101292259 -18992053 + L1M5 LINE L1 5566 5660 -504 5 1357 305 225 62 12 chr13 101292567 101292648 -18991664 - RMER1A Other Other -717 313 229 5 1357 1606 269 28 55 chr13 101292655 101293224 -18991088 + RMER1B Other Other 1 554 -512 5 1357 4244 164 190 21 chr13 101293237 101294112 -18990200 + RMER1A Other Other 1 1023 -7 5 1357 224 325 0 24 chr13 101294148 101294230 -18990082 - ID4_ SINE ID -1 82 3 5 1357 1135 78 0 0 chr13 101294289 101294430 -18989882 + B1_Mus1 SINE Alu 2 142 -6 5 1357 201 74 0 0 chr13 101294576 101294603 -18989709 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1357 570 150 0 0 chr13 101294604 101294724 -18989588 + (TC)n Simple_repeat Simple_repeat 2 121 0 5 1357 291 54 0 0 chr13 101294724 101294761 -18989551 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1357 232 227 0 0 chr13 101294761 101294805 -18989507 - ID4 SINE ID -14 69 26 5 1357 1750 21 0 0 chr13 101295562 101295755 -18988557 + B2_Mm1a SINE B2 1 193 0 5 1357 363 217 59 24 chr13 101296100 101296185 -18988127 + Lx5 LINE L1 5492 5579 -721 5 1357 284 150 7 0 chr13 101296272 101296330 -18987982 + Lx5 LINE L1 5707 5785 -506 5 1357 253 229 0 16 chr13 101296332 101296394 -18987918 + B3 SINE B2 20 80 -136 5 1357 1816 241 28 25 chr13 101296415 101296927 -18987385 + RLTR16 LTR ERVK 4 491 -14 5 1357 21 0 0 0 chr13 101297087 101297108 -18987204 + GC_rich Low_complexity Low_complexity 1 21 0 5 1357 858 147 21 0 chr13 101297148 101297291 -18987021 - B1_Mur2 SINE Alu 0 149 4 5 1357 29 60 0 0 chr13 101297508 101297558 -18986754 + AT_rich Low_complexity Low_complexity 1 50 0 5 1357 730 210 0 14 chr13 101297794 101297934 -18986378 - B1_Mus1 SINE Alu -10 138 1 5 1357 1297 54 53 6 chr13 101297982 101298151 -18986161 - B2_Mm2 SINE B2 -18 177 1 5 1357 422 289 39 0 chr13 101298178 101298306 -18986006 - RSINE1 SINE B4 -10 155 23 5 1357 323 219 0 180 chr13 101298466 101298594 -18985718 + PB1D10 SINE Alu 1 105 -12 5 1357 550 265 34 0 chr13 101298631 101298778 -18985534 + RSINE1 SINE B4 4 155 -10 5 1357 1087 83 7 0 chr13 101298842 101298987 -18985325 + B1_Mus1 SINE Alu 2 147 -1 5 1357 477 0 0 0 chr13 101298988 101299041 -18985271 + (CAAAA)n Simple_repeat Simple_repeat 3 55 0 5 1357 577 174 111 14 chr13 101299053 101299182 -18985130 + B1_Mur4 SINE Alu 5 150 0 5 1357 897 167 14 7 chr13 101299522 101299667 -18984645 - B1_Mur4 SINE Alu 0 150 5 5 1357 1083 103 0 0 chr13 101299675 101299820 -18984492 - B1_Mus1 SINE Alu -2 146 2 5 1357 2098 148 44 52 chr13 101299845 101300230 -18984082 + ORR1C2 LTR MaLR 3 384 0 5 1357 537 248 0 0 chr13 101300290 101300407 -18983905 + B1_Mur1 SINE Alu 21 137 -12 5 1357 21 36 0 0 chr13 101300423 101300451 -18983861 + AT_rich Low_complexity Low_complexity 1 28 0 5 1357 231 36 0 0 chr13 101300454 101300482 -18983830 + (TG)n Simple_repeat Simple_repeat 2 29 0 5 1357 810 268 68 0 chr13 101300573 101300763 -18983549 + B3 SINE B2 9 211 -5 5 1357 316 200 0 0 chr13 101300795 101300850 -18983462 - RSINE1 SINE B4 -108 57 3 5 1357 1245 98 35 0 chr13 101301020 101301194 -18983118 + B2_Mm1t SINE B2 2 181 -12 5 1357 340 96 1 21 chr13 101301199 101301313 -18982999 + B2_Mm2 SINE B2 49 195 0 5 1357 236 206 55 68 chr13 101301374 101301447 -18982865 - tRNA-Ala-GCY_ tRNA tRNA -2 73 2 5 1357 297 316 13 0 chr13 101301557 101301636 -18982676 + ID4_ SINE ID 3 82 -1 5 1357 1009 215 111 137 chr13 101301766 101302229 -18982083 + RLTR11A LTR ERVK 4 447 -81 5 1357 378 61 0 0 chr13 101302229 101302278 -18982034 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1357 1009 215 111 137 chr13 101302278 101302348 -18981964 + RLTR11A LTR ERVK 448 522 -6 5 1357 297 248 45 45 chr13 101303486 101303596 -18980716 + PB1D10 SINE Alu 1 110 -7 5 1357 370 280 33 94 chr13 101303613 101303794 -18980518 + B4 SINE B4 6 175 -117 5 1357 255 179 35 35 chr13 101303949 101304007 -18980305 + ID4_ SINE ID 5 62 -21 6 1357 195 104 20 40 chr13 101304007 101304057 -18980255 + GA-rich Low_complexity Low_complexity 1 49 0 6 1357 180 111 0 0 chr13 101304600 101304627 -18979685 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 6 1357 807 130 68 55 chr13 101304631 101304777 -18979535 + B1_Mur3 SINE Alu 2 149 0 6 1357 824 192 204 0 chr13 101305339 101305511 -18978801 - B3 SINE B2 -8 208 2 6 1357 524 229 0 9 chr13 101305511 101305617 -18978695 - ID_B1 SINE B4 -13 211 107 6 1357 231 36 0 0 chr13 101306307 101306335 -18977977 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1357 632 232 51 112 chr13 101306478 101306806 -18977506 + L1MB8 LINE L1 4469 4805 -1341 6 1357 1124 114 48 11 chr13 101306828 101307014 -18977298 + B2_Mm2 SINE B2 2 194 -1 6 1357 1000 277 28 17 chr13 101307089 101307376 -18976936 - B4A SINE B4 -2 290 1 6 1357 298 200 0 0 chr13 101307383 101307438 -18976874 - ID4 SINE ID -20 63 9 6 1357 288 311 0 53 chr13 101307500 101307595 -18976717 + PB1D10 SINE Alu 11 100 -17 6 1357 250 263 81 98 chr13 101307598 101307771 -18976541 + L1MB8 LINE L1 5088 5257 -889 6 1357 1546 52 16 0 chr13 101307771 101307962 -18976350 + B2_Mm2 SINE B2 1 194 -1 6 1357 1095 69 14 0 chr13 101307969 101308113 -18976199 + B1_Mus1 SINE Alu 3 148 0 6 1357 255 105 0 0 chr13 101308173 101308211 -18976101 - U2 snRNA snRNA -147 41 4 6 1357 338 250 90 11 chr13 101308342 101308431 -18975881 + PB1D10 SINE Alu 17 112 -5 6 1357 489 294 125 35 chr13 101308443 101308894 -18975418 + L1MB8 LINE L1 5428 5953 -221 6 1357 233 246 18 0 chr13 101310022 101310079 -18974233 - MER5A DNA MER1_type -131 58 1 6 1357 255 299 13 25 chr13 101310161 101310240 -18974072 + BC1_Mm scRNA scRNA 1 78 -74 6 1357 930 205 70 30 chr13 101310561 101310762 -18973550 - ID_B1 SINE B4 -8 216 8 6 1357 180 0 0 0 chr13 101311393 101311413 -18972899 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 6 1357 713 281 12 0 chr13 101311526 101311686 -18972626 + RSINE1 SINE B4 4 165 0 6 1357 243 88 0 0 chr13 101311690 101311724 -18972588 + (CA)n Simple_repeat Simple_repeat 1 34 0 6 1357 29 28 0 0 chr13 101311732 101311768 -18972544 + AT_rich Low_complexity Low_complexity 1 36 0 6 1357 792 154 0 29 chr13 101311796 101311936 -18972376 - B1_Mus2 SINE Alu -2 145 10 6 1357 519 123 0 0 chr13 101312004 101312085 -18972227 + (TG)n Simple_repeat Simple_repeat 1 81 0 6 1357 477 50 0 0 chr13 101312085 101312144 -18972168 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 1357 665 154 42 25 chr13 101312145 101312265 -18972047 - B3 SINE B2 -89 127 6 6 1357 239 304 87 94 chr13 101312347 101312474 -18971838 + PB1 SINE Alu 2 127 0 6 1357 258 260 0 3 chr13 101312487 101312559 -18971753 + ID4_ SINE ID 12 82 -1 6 1357 207 100 0 0 chr13 101312773 101312803 -18971509 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1357 351 0 0 0 chr13 101312954 101312993 -18971319 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1357 1106 59 0 0 chr13 101313800 101313935 -18970377 + B1_Mm SINE Alu 1 135 -12 6 1357 1050 115 0 0 chr13 101313935 101314100 -18970212 + (GAAA)n Simple_repeat Simple_repeat 1 165 0 6 1357 653 262 27 0 chr13 101314109 101314258 -18970054 + RSINE1 SINE B4 3 155 -10 6 1357 263 255 204 0 chr13 101314457 101314555 -18969757 + L2a LINE L2 3300 3417 -9 6 1357 1390 81 11 0 chr13 101314880 101315065 -18969247 + B2_Mm1a SINE B2 2 188 -5 6 1357 243 0 0 0 chr13 101315161 101315188 -18969124 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1357 1479 55 0 11 chr13 101315188 101315371 -18968941 - B2_Mm2 SINE B2 -14 181 1 6 1357 333 0 0 0 chr13 101315371 101315408 -18968904 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 1357 473 79 284 10 chr13 101315408 101315510 -18968802 - B1_Mus2 SINE Alu -9 138 9 6 1357 230 262 0 47 chr13 101315468 101315532 -18968780 - B4A SINE B4 -157 135 75 6 1357 942 213 108 32 chr13 101315643 101315958 -18968354 + RLTR15 LTR ERVK 4 342 -17 6 1357 1190 55 0 20 chr13 101316173 101316322 -18967990 + B1_Mus2 SINE Alu 2 147 0 6 1357 343 301 8 34 chr13 101316438 101316555 -18967757 + B1F2 SINE Alu 1 114 -35 6 1357 290 224 22 56 chr13 101316550 101316640 -18967672 + PB1D7 SINE Alu 30 116 -4 6 1357 534 285 88 6 chr13 101316645 101316804 -18967508 + B3A SINE B2 1 172 -26 6 1357 570 261 13 78 chr13 101316868 101317022 -18967290 + B1_Mur2 SINE Alu 1 144 -5 6 1357 189 74 0 0 chr13 101318172 101318199 -18966113 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1357 23 0 0 0 chr13 101318259 101318282 -18966030 + AT_rich Low_complexity Low_complexity 1 23 0 6 1358 333 0 0 0 chr13 101318835 101318872 -18965440 + (TG)n Simple_repeat Simple_repeat 1 37 0 6 1358 762 218 0 26 chr13 101318873 101319024 -18965288 + B1_Mur3 SINE Alu 1 147 -2 6 1358 654 237 135 10 chr13 101319071 101319263 -18965049 + B3 SINE B2 1 216 0 6 1358 1205 55 0 0 chr13 101319287 101319432 -18964880 + B1_Mm SINE Alu 2 146 -1 6 1358 375 200 17 0 chr13 101319485 101319558 -18964754 - ID4_ SINE ID -76 76 1 6 1358 241 250 145 0 chr13 101319611 101319687 -18964625 - RSINE1 SINE B4 -68 97 11 6 1358 616 198 0 0 chr13 101319689 101319795 -18964517 - B3A SINE B2 -92 106 1 6 1358 1287 92 27 21 chr13 101319812 101320000 -18964312 - B2_Mm1a SINE B2 -3 190 2 6 1358 625 176 0 58 chr13 101320010 101320131 -18964181 - B1_Mur2 SINE Alu -7 142 29 6 1358 186 103 0 0 chr13 101323930 101323959 -18960353 + (TGG)n Simple_repeat Simple_repeat 1 29 0 6 1358 22 0 0 0 chr13 101323966 101323988 -18960324 + AT_rich Low_complexity Low_complexity 1 22 0 6 1358 796 245 23 46 chr13 101324085 101324303 -18960009 + B3 SINE B2 1 213 -3 6 1358 1064 278 52 79 chr13 101324349 101324480 -18959832 - L1MB7 LINE L1 -92 6092 5974 6 1358 906 134 0 36 chr13 101324480 101324619 -18959693 - B1_Mur4 SINE Alu -16 134 1 6 1358 1064 278 52 79 chr13 101324619 101324932 -18959380 - L1MB7 LINE L1 -211 5973 5660 6 1358 980 30 8 0 chr13 101324948 101325079 -18959233 - B1_Mus2 SINE Alu 0 147 16 6 1358 203 146 24 0 chr13 101325334 101325375 -18958937 + CT-rich Low_complexity Low_complexity 3 44 0 6 1358 264 219 44 59 chr13 101325407 101325475 -18958837 - ID4_ SINE ID -14 69 3 6 1358 241 259 0 0 chr13 101326099 101326153 -18958159 + B1_Mus2 SINE Alu 1 54 -93 6 1358 436 156 0 22 chr13 101326154 101326246 -18958066 + (CAGAGA)n Simple_repeat Simple_repeat 4 93 0 6 1358 280 240 0 26 chr13 101326250 101326327 -18957985 + PB1D9 SINE Alu 32 106 -14 6 1358 278 229 118 24 chr13 101326395 101326480 -18957832 + PB1 SINE Alu 33 125 -2 6 1358 567 246 15 0 chr13 101326550 101326684 -18957628 + RSINE1 SINE B4 29 164 -1 6 1358 227 303 79 0 chr13 101326724 101326800 -18957512 + ID4_ SINE ID 2 83 0 6 1358 186 103 0 0 chr13 101327858 101327887 -18956425 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 6 1358 432 212 29 29 chr13 101327887 101327989 -18956323 - PB1D10 SINE Alu -15 102 1 6 1358 797 249 48 14 chr13 101328291 101328499 -18955813 - B3 SINE B2 0 216 2 6 1358 1440 63 0 6 chr13 101328655 101328831 -18955481 + B2_Mm2 SINE B2 2 176 -19 6 1358 738 96 182 8 chr13 101328831 101328956 -18955356 + B1_Mus1 SINE Alu 1 148 0 6 1358 297 128 0 0 chr13 101328958 101329005 -18955307 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 6 1358 352 38 0 19 chr13 101329983 101330037 -18954275 + B2_Mm2 SINE B2 127 179 -16 6 1358 22 0 0 0 chr13 101330041 101330063 -18954249 + GC_rich Low_complexity Low_complexity 1 22 0 6 1358 1254 41 0 0 chr13 101330104 101330251 -18954061 + B1_Mus1 SINE Alu 1 147 -1 6 1358 27 29 0 0 chr13 101330252 101330286 -18954026 + AT_rich Low_complexity Low_complexity 1 34 0 6 1358 360 0 0 0 chr13 101330379 101330419 -18953893 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6 1358 23 0 0 0 chr13 101331541 101331564 -18952748 + AT_rich Low_complexity Low_complexity 1 23 0 6 1358 282 56 0 0 chr13 101331838 101331874 -18952438 + (TG)n Simple_repeat Simple_repeat 2 37 0 6 1358 1407 66 16 16 chr13 101332228 101332414 -18951898 - B2_Mm2 SINE B2 -8 187 2 6 1358 243 260 41 0 chr13 101332621 101332694 -18951618 - L1MC4 LINE L1 -368 7674 7599 6 1358 2594 129 7 12 chr13 101332943 101333365 -18950947 - RMER6A LTR ERVK 0 756 337 6 1358 1099 64 0 0 chr13 101333371 101333512 -18950800 + B1_Mus2 SINE Alu 7 147 0 6 1358 2219 113 6 25 chr13 101333514 101333869 -18950443 - RMER6A LTR ERVK -408 348 1 6 1358 639 181 118 22 chr13 101334012 101334148 -18950164 - B1_Mur4 SINE Alu 0 150 2 6 1358 473 274 7 94 chr13 101334159 101334269 -18950043 - ID_B1 SINE B4 -8 216 119 6 1358 225 65 0 0 chr13 101334269 101334300 -18950012 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1358 473 274 7 94 chr13 101334300 101334338 -18949974 - ID_B1 SINE B4 -106 118 81 6 1358 216 0 0 0 chr13 101334354 101334378 -18949934 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1358 1594 174 122 29 chr13 101334466 101334701 -18949611 - MTD LTR MaLR -14 405 140 6 1358 1627 37 0 0 chr13 101334701 101334890 -18949422 - B2_Mm1t SINE B2 -4 189 1 6 1358 1594 173 124 30 chr13 101334890 101335033 -18949279 - MTD LTR MaLR -280 139 1 6 1358 180 111 0 0 chr13 101335115 101335142 -18949170 + (ATG)n Simple_repeat Simple_repeat 1 27 0 6 1358 641 264 39 68 chr13 101336805 101337012 -18947300 - ID_B1 SINE B4 -4 220 20 6 1358 568 176 0 196 chr13 101336995 101337143 -18947169 + MTEb LTR MaLR 11 129 -250 6 1358 360 0 0 0 chr13 101337145 101337185 -18947127 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1358 620 184 43 29 chr13 101337187 101337327 -18946985 + MTEb LTR MaLR 238 379 0 6 1358 202 333 0 0 chr13 101337404 101337458 -18946854 - MIRb SINE MIR -93 175 122 6 1358 290 190 49 8 chr13 101337508 101337630 -18946682 + (TG)n Simple_repeat Simple_repeat 1 127 0 7 1358 601 231 139 45 chr13 101337631 101337898 -18946414 - B4A SINE B4 0 292 1 7 1358 234 0 0 0 chr13 101338024 101338050 -18946262 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1358 1170 51 0 0 chr13 101338050 101338187 -18946125 - B1_Mm SINE Alu -10 137 1 7 1358 272 294 17 52 chr13 101338260 101338373 -18945939 + MLT1A LTR MaLR 51 159 -215 7 1358 252 236 181 0 chr13 101338373 101338445 -18945867 + PB1D10 SINE Alu 1 85 -32 7 1358 1934 187 3 44 chr13 101338447 101338810 -18945502 + ORR1B1 LTR MaLR 1 348 -46 7 1358 247 0 127 0 chr13 101338870 101338933 -18945379 + (CCTG)n Simple_repeat Simple_repeat 4 74 0 7 1358 242 186 0 63 chr13 101338980 101339043 -18945269 + 4.5SRNA scRNA scRNA 28 86 -8 7 1358 433 224 102 0 chr13 101338993 101339091 -18945221 + B1F1 SINE Alu 42 149 0 7 1358 246 211 19 87 chr13 101339079 101339103 -18945209 - MER97c DNA MER1_type? -353 737 720 7 1358 4261 138 11 66 chr13 101339103 101339621 -18944691 - RMER6A LTR ERVK 0 756 274 7 1358 1261 41 0 0 chr13 101339621 101339768 -18944544 - B1_Mus2 SINE Alu 0 147 1 7 1358 4261 138 11 66 chr13 101339768 101340049 -18944263 - RMER6A LTR ERVK -483 273 1 7 1358 246 211 19 87 chr13 101340049 101340128 -18944184 - MER97c DNA MER1_type? -371 719 641 7 1358 650 306 150 17 chr13 101340285 101340631 -18943681 - MER97c DNA MER1_type? -685 405 14 7 1358 468 249 164 11 chr13 101340862 101341045 -18943267 + ORR1E LTR MaLR 147 357 -2 7 1358 1167 75 0 0 chr13 101341168 101341314 -18942998 + B1_Mus1 SINE Alu 3 148 0 7 1358 1001 93 0 0 chr13 101341905 101342034 -18942278 - B1_Mus2 SINE Alu -18 129 1 7 1358 704 152 106 0 chr13 101342069 101342201 -18942111 - B1_Mus1 SINE Alu -1 147 2 7 1358 311 297 0 13 chr13 101342425 101342500 -18941812 - ID4 SINE ID -5 78 5 7 1358 303 254 31 5 chr13 101342514 101342608 -18941704 - B1F SINE Alu -25 124 25 7 1358 447 123 485 15 chr13 101342712 101342844 -18941468 + B2_Mm2 SINE B2 1 194 -1 7 1358 442 91 394 0 chr13 101342859 101342958 -18941354 - B2_Mm2 SINE B2 -11 184 47 7 1358 1260 97 23 0 chr13 101343042 101343218 -18941094 - B2_Mm2 SINE B2 -14 181 2 7 1358 724 261 13 105 chr13 101343471 101343531 -18940781 - B4A SINE B4 -16 276 229 7 1358 261 0 0 0 chr13 101343531 101343560 -18940752 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 7 1358 1154 62 7 0 chr13 101343560 101343705 -18940607 - B1_Mus1 SINE Alu -2 146 1 7 1358 724 261 13 105 chr13 101343705 101343947 -18940365 - B4A SINE B4 -64 228 2 7 1358 1087 198 9 14 chr13 101343977 101344187 -18940125 + B3 SINE B2 2 210 -6 7 1358 1174 62 0 7 chr13 101344398 101344544 -18939768 + B1_Mus1 SINE Alu 2 146 -2 7 1358 1198 56 0 14 chr13 101344588 101344734 -18939578 - B1_Mus2 SINE Alu -2 145 2 7 1358 702 206 49 14 chr13 101344736 101344879 -18939433 - B1_Mur1 SINE Alu 0 149 2 7 1358 719 255 96 10 chr13 101344884 101345082 -18939230 - B3 SINE B2 0 216 2 7 1358 230 286 12 31 chr13 101345136 101345220 -18939092 + MIRm SINE MIR 74 161 -115 7 1358 373 266 451 13 chr13 101345434 101345582 -18938730 - B3 SINE B2 -1 215 3 7 1358 209 250 0 0 chr13 101345639 101345679 -18938633 + (CG)n Simple_repeat Simple_repeat 2 41 0 7 1358 569 147 18 81 chr13 101345686 101345797 -18938515 - B1_Mus1 SINE Alu -40 108 5 7 1358 390 204 0 0 chr13 101346434 101346522 -18937790 + GA-rich Low_complexity Low_complexity 2 89 0 7 1358 273 311 126 0 chr13 101346522 101346535 -18937777 + PB1D10 SINE Alu 1 47 -70 7 1358 284 246 68 14 chr13 101346535 101346609 -18937703 + MT2B LTR ERVL 178 255 -346 7 1358 273 311 126 0 chr13 101346609 101346625 -18937687 + PB1D10 SINE Alu 48 116 -1 7 1358 979 135 208 0 chr13 101347230 101347408 -18936904 - B3 SINE B2 0 216 2 7 1358 296 320 0 0 chr13 101347411 101347489 -18936823 - PB1 SINE Alu -1 126 49 7 1358 752 166 33 33 chr13 101348106 101348242 -18936070 + B1_Mur4 SINE Alu 1 138 -12 7 1358 189 0 0 0 chr13 101348242 101348263 -18936049 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 7 1358 752 166 33 33 chr13 101348263 101348276 -18936036 + B1_Mur4 SINE Alu 139 150 0 7 1358 207 146 0 0 chr13 101348305 101348346 -18935966 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 7 1358 426 304 18 0 chr13 101348354 101348466 -18935846 - PB1 SINE Alu 0 127 14 7 1358 1185 76 0 0 chr13 101348495 101348639 -18935673 + B1_Mus1 SINE Alu 1 144 -4 7 1358 349 292 108 19 chr13 101348644 101348801 -18935511 + RLTR21 LTR ERVK 1083 1253 -319 7 1358 267 247 0 0 chr13 101348801 101348874 -18935438 + (TA)n Simple_repeat Simple_repeat 1 73 0 7 1358 360 64 0 0 chr13 101348874 101348921 -18935391 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 7 1358 384 40 0 0 chr13 101349208 101349258 -18935054 + (TATG)n Simple_repeat Simple_repeat 2 51 0 7 1358 192 77 0 0 chr13 101349258 101349284 -18935028 + (TC)n Simple_repeat Simple_repeat 1 26 0 7 1358 510 230 147 7 chr13 101349287 101349423 -18934889 - RSINE1 SINE B4 0 165 11 7 1358 749 122 19 0 chr13 101349622 101349729 -18934583 + B1_Mur2 SINE Alu 41 149 0 7 1358 513 182 11 45 chr13 101349893 101350041 -18934271 + B2_Mm2 SINE B2 2 141 -57 7 1358 180 0 0 0 chr13 101350366 101350386 -18933926 + (CAA)n Simple_repeat Simple_repeat 2 21 0 7 1358 439 263 55 55 chr13 101350560 101350588 -18933724 + B1F1 SINE Alu 5 149 0 7 1358 577 231 17 0 chr13 101350588 101350705 -18933607 + ID_B1 SINE B4 106 224 0 7 1358 621 284 57 65 chr13 101350845 101351033 -18933279 - B4A SINE B4 -7 285 98 7 1358 1642 31 0 5 chr13 101351033 101351227 -18933085 - B2_Mm1a SINE B2 0 193 1 7 1358 621 284 57 65 chr13 101351227 101351317 -18932995 - B4A SINE B4 -195 97 9 7 1358 598 175 7 7 chr13 101351326 101351470 -18932842 + CT-rich Low_complexity Low_complexity 2 145 0 7 1358 397 191 0 0 chr13 101351483 101351551 -18932761 - ID4 SINE ID -14 69 2 7 1358 516 122 0 0 chr13 101352243 101352325 -18931987 + (TC)n Simple_repeat Simple_repeat 2 83 0 7 1358 316 190 0 0 chr13 101352586 101352644 -18931668 - B3 SINE B2 -1 215 158 7 1358 790 101 8 16 chr13 101352641 101352762 -18931550 + B1_Mus2 SINE Alu 28 147 0 7 1358 189 121 0 0 chr13 101352790 101352823 -18931489 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 7 1358 711 142 173 0 chr13 101352875 101353002 -18931310 + B1_Mur3 SINE Alu 1 149 0 7 1358 394 272 61 0 chr13 101353132 101353246 -18931066 + B4 SINE B4 169 289 -3 7 1358 500 206 39 0 chr13 101353468 101353570 -18930742 - PB1D10 SINE Alu -10 107 2 7 1358 308 111 19 0 chr13 101353867 101353921 -18930391 + (TG)n Simple_repeat Simple_repeat 1 55 0 7 1358 1130 83 7 0 chr13 101354012 101354157 -18930155 - B1_Mus2 SINE Alu 0 147 2 7 1358 1233 212 149 73 chr13 101354205 101354492 -18929820 + RLTR25A LTR ERVK 585 887 -216 7 1358 441 0 0 0 chr13 101354492 101354541 -18929771 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1358 1233 212 149 73 chr13 101354541 101354735 -18929577 + RLTR25A LTR ERVK 888 1103 0 7 1358 225 256 21 118 chr13 101354746 101354839 -18929473 - B4A SINE B4 -208 84 1 7 1358 463 220 22 0 chr13 101354956 101355047 -18929265 + ORR1D2 LTR MaLR 2 94 -276 7 1358 926 194 16 22 chr13 101355046 101355230 -18929082 - B3 SINE B2 0 216 34 7 1358 785 261 113 4 chr13 101355232 101355471 -18928841 + ORR1D2 LTR MaLR 85 349 -21 7 1358 252 292 122 24 chr13 101355831 101355954 -18928358 - L1ME3 LINE L1 -87 6075 5941 7 1358 530 182 149 77 chr13 101355971 101356113 -18928199 - B1_Mur1 SINE Alu -1 149 6 7 1358 291 203 0 0 chr13 101356131 101356195 -18928117 + CT-rich Low_complexity Low_complexity 3 66 0 7 1358 357 266 259 59 chr13 101356320 101356478 -18927834 - L1ME3 LINE L1 -223 5939 5750 7 1358 2116 154 60 31 chr13 101356478 101356861 -18927451 + ORR1B1 LTR MaLR 1 394 0 7 1358 357 266 259 59 chr13 101356861 101356938 -18927374 - L1ME3 LINE L1 -413 5749 5657 7 1358 263 279 8 111 chr13 101356940 101357057 -18927255 + MT2B LTR ERVL 152 256 -345 7 1358 753 207 0 0 chr13 101356963 101357103 -18927209 + B1_Mur3 SINE Alu 10 149 0 7 1358 304 237 95 95 chr13 101357201 101357285 -18927027 + RSINE1 SINE B4 81 164 -1 7 1358 339 338 50 13 chr13 101357621 101357780 -18926532 + MLT1N2 LTR MaLR 396 560 -2 7 1358 476 277 33 25 chr13 101357772 101357894 -18926418 + PB1 SINE Alu 2 124 -3 7 1358 473 204 0 125 chr13 101358348 101358460 -18925852 + B1_Mur2 SINE Alu 1 98 -51 7 1358 53 17 0 0 chr13 101358463 101358523 -18925789 + AT_rich Low_complexity Low_complexity 1 60 0 7 1358 707 246 111 28 chr13 101358682 101358899 -18925413 - B4 SINE B4 -18 274 40 7 1358 2275 86 53 20 chr13 101358906 101359261 -18925051 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1358 29390 20 1 2 chr13 101359265 101362538 -18921774 - IAPEz-int LTR ERVK -3 6478 3210 7 1358 9073 63 58 44 chr13 101362537 101363825 -18920487 - IAPEz-int LTR ERVK -5168 1313 8 7 1358 2275 86 53 20 chr13 101363825 101364180 -18920132 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1358 598 183 9 5 chr13 101364756 101364879 -18919433 - B1_Mur4 SINE Alu 0 120 1 7 1358 842 159 14 7 chr13 101364909 101365055 -18919257 - B1_Mus1 SINE Alu 0 148 2 7 1358 342 0 0 0 chr13 101365072 101365110 -18919202 + (TG)n Simple_repeat Simple_repeat 1 38 0 7 1358 1002 17 0 0 chr13 101365110 101365225 -18919087 + (GA)n Simple_repeat Simple_repeat 1 116 0 7 1358 253 303 0 110 chr13 101365375 101365475 -18918837 - PB1D9 SINE Alu -31 89 1 7 1358 354 174 101 0 chr13 101365745 101365814 -18918498 - B3A SINE B2 -120 78 3 7 1358 346 278 10 10 chr13 101366118 101366216 -18918096 - PB1D10 SINE Alu -12 105 8 7 1358 195 42 0 0 chr13 101366335 101366359 -18917953 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 7 1358 186 43 0 0 chr13 101366850 101366873 -18917439 + (CAG)n Simple_repeat Simple_repeat 2 24 0 7 1358 361 240 147 31 chr13 101366874 101367003 -18917309 - MIR SINE MIR -38 224 81 7 1358 240 154 0 0 chr13 101367496 101367535 -18916777 - L1MC1 LINE L1 -29 6304 6266 7 1358 22 0 0 0 chr13 101367808 101367830 -18916482 + AT_rich Low_complexity Low_complexity 1 22 0 7 1358 255 269 96 22 chr13 101367897 101368032 -18916280 + PB1D7 SINE Alu 2 148 -1 7 1358 24 32 0 0 chr13 101368549 101368580 -18915732 + AT_rich Low_complexity Low_complexity 1 31 0 7 1358 1089 8 0 0 chr13 101368582 101368709 -18915603 - B1_Mus1 SINE Alu 0 148 22 8 1358 401 239 51 0 chr13 101368720 101368837 -18915475 - PB1 SINE Alu -4 123 1 8 1358 821 174 14 7 chr13 101369224 101369363 -18914949 - B1_Mur2 SINE Alu -7 142 3 8 1358 204 40 0 0 chr13 101369383 101369408 -18914904 + (TC)n Simple_repeat Simple_repeat 2 26 0 8 1358 857 183 0 0 chr13 101369415 101369557 -18914755 - B1_Mus1 SINE Alu -6 142 1 8 1358 1462 63 16 0 chr13 101369872 101370061 -18914251 + B2_Mm1t SINE B2 2 193 0 8 1358 22 35 0 0 chr13 101370200 101370229 -18914083 + AT_rich Low_complexity Low_complexity 1 29 0 8 1358 255 167 183 0 chr13 101371275 101371335 -18912977 + PB1D10 SINE Alu 28 98 -19 8 1358 185 350 20 30 chr13 101371705 101371805 -18912507 - MIRc SINE MIR -125 143 45 8 1358 318 295 13 0 chr13 101371806 101371884 -18912428 - ID4 SINE ID -2 81 3 8 1358 850 110 16 0 chr13 101371953 101372080 -18912232 + URR1B DNA MER1_type 97 225 0 8 1358 998 180 42 9 chr13 101372622 101372927 -18911385 + ORR1D1 LTR MaLR 7 374 0 8 1358 505 138 367 0 chr13 101373070 101373179 -18911133 - B1_Mur4 SINE Alu -1 149 1 8 1358 44 0 0 0 chr13 101373363 101373407 -18910905 + AT_rich Low_complexity Low_complexity 1 44 0 8 1358 624 216 64 14 chr13 101373435 101373576 -18910736 - B1F SINE Alu -1 148 1 8 1358 247 321 12 0 chr13 101374150 101374231 -18910081 - RSINE1 SINE B4 -51 114 33 8 1358 818 41 0 0 chr13 101374319 101374417 -18909895 + U6 snRNA snRNA 10 107 0 8 1358 5491 42 40 3 chr13 101374417 101375092 -18909220 + L1_Mus1 LINE L1 5865 6564 -3 8 1358 597 265 0 0 chr13 101375292 101375443 -18908869 + B3A SINE B2 1 151 -47 8 1358 404 91 0 15 chr13 101375444 101375511 -18908801 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 1358 1209 171 19 5 chr13 101375522 101375733 -18908579 + B3 SINE B2 1 214 -2 8 1358 649 162 95 0 chr13 101375760 101375865 -18908447 + PB1D9 SINE Alu 1 115 -5 8 1358 188 35 35 0 chr13 101375867 101375896 -18908416 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 8 1358 302 409 23 0 chr13 101375939 101376071 -18908241 - MIRb SINE MIR -132 136 2 8 1358 404 191 95 11 chr13 101376347 101376442 -18907870 + PB1D9 SINE Alu 2 104 -16 8 1358 272 232 0 67 chr13 101376897 101376957 -18907355 - ID4_ SINE ID -5 78 23 8 1358 355 98 0 0 chr13 101376957 101377008 -18907304 + MTD LTR MaLR 369 419 0 8 1358 518 279 87 13 chr13 101377008 101377146 -18907166 - ID_B1 SINE B4 -68 156 8 8 1358 216 336 9 71 chr13 101377167 101377181 -18907131 + ID SINE ID 72 78 -146 8 1358 369 245 44 70 chr13 101377181 101377295 -18907017 + PB1D10 SINE Alu 1 111 -6 8 1358 662 239 62 62 chr13 101377432 101377610 -18906702 + B3 SINE B2 16 193 -23 8 1358 391 202 78 17 chr13 101377836 101377952 -18906360 + B3 SINE B2 88 210 -6 8 1358 670 229 14 0 chr13 101378229 101378369 -18905943 - B1F SINE Alu -6 143 2 8 1358 21 82 0 0 chr13 101378449 101378498 -18905814 + AT_rich Low_complexity Low_complexity 1 49 0 8 1358 505 261 0 17 chr13 101378500 101378617 -18905695 + PB1D7 SINE Alu 5 119 -1 8 1358 870 152 21 0 chr13 101378636 101378781 -18905531 - B1_Mur4 SINE Alu 0 150 3 8 1358 391 215 0 123 chr13 101378679 101378801 -18905511 - MT2B LTR ERVL -344 257 151 8 1358 595 212 73 0 chr13 101378947 101379084 -18905228 + B1F2 SINE Alu 3 149 0 8 1358 546 0 133 0 chr13 101379207 101379417 -18904895 + (CAGG)n Simple_repeat Simple_repeat 1 238 0 8 1358 270 200 50 125 chr13 101379420 101379540 -18904772 + B1_Mur1 SINE Alu 39 149 0 8 1358 447 225 150 0 chr13 101380091 101380211 -18904101 - B1F SINE Alu -7 142 5 8 1358 357 219 328 0 chr13 101380286 101380414 -18903898 - B4 SINE B4 -18 274 105 8 1358 1249 27 0 7 chr13 101380427 101380575 -18903737 - B1_Mus1 SINE Alu 0 148 2 8 1358 1713 16 5 0 chr13 101380836 101381028 -18903284 - B2_Mm1t SINE B2 0 193 1 8 1358 857 243 28 5 chr13 101382925 101383136 -18901176 + B3 SINE B2 1 216 0 8 1358 1385 24 94 12 chr13 101383390 101383561 -18900751 + B2_Mm1a SINE B2 2 186 -7 8 1358 25 0 0 0 chr13 101383573 101383598 -18900714 + AT_rich Low_complexity Low_complexity 1 25 0 8 1358 30 0 0 0 chr13 101383701 101383731 -18900581 + AT_rich Low_complexity Low_complexity 1 30 0 8 1358 193 316 18 0 chr13 101384002 101384059 -18900253 - L2a LINE L2 -95 3331 3274 8 1358 357 288 22 22 chr13 101384353 101384488 -18899824 - L2a LINE L2 -545 2874 2740 8 1358 1023 186 58 10 chr13 101384743 101384949 -18899363 + B3 SINE B2 1 216 0 8 1358 1107 134 16 43 chr13 101385120 101385307 -18899005 - URR1B DNA MER1_type 0 225 44 8 1358 1826 199 72 15 chr13 101385468 101385857 -18898455 - MTD LTR MaLR -8 411 1 8 1358 23 54 0 0 chr13 101386729 101386766 -18897546 + GC_rich Low_complexity Low_complexity 1 37 0 8 1358 511 42 0 27 chr13 101388094 101388168 -18896144 + L1Md_F2 LINE L1 6501 6572 -10 8 1358 287 243 14 0 chr13 101388177 101388247 -18896065 - ID4_ SINE ID -10 73 3 8 1358 491 185 54 27 chr13 101388364 101388475 -18895837 + PB1D9 SINE Alu 1 114 -6 8 1358 291 281 78 11 chr13 101388498 101388601 -18895711 + PB1D10 SINE Alu 3 112 -5 8 1358 274 200 154 0 chr13 101388742 101388807 -18895505 - B2_Mm2 SINE B2 -119 76 2 8 1358 22 0 0 0 chr13 101388814 101388836 -18895476 + AT_rich Low_complexity Low_complexity 1 22 0 8 1358 373 261 122 0 chr13 101388848 101388963 -18895349 - B1_Mur2 SINE Alu -7 142 14 8 1358 1353 68 22 22 chr13 101389110 101389290 -18895022 - B2_Mm2 SINE B2 -14 181 2 8 1358 1203 74 0 0 chr13 101389331 101389479 -18894833 + B1_Mus1 SINE Alu 1 148 0 8 1358 180 0 0 0 chr13 101389495 101389515 -18894797 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 8 1358 478 197 120 0 chr13 101389519 101389661 -18894651 - L1MA8 LINE L1 -5 6286 6128 8 1358 303 280 113 192 chr13 101389662 101389839 -18894473 + RSINE1 SINE B4 3 165 0 8 1358 443 245 93 72 chr13 101389905 101390074 -18894238 - L1MA8 LINE L1 -231 6060 5872 8 1358 1267 64 5 142 chr13 101390074 101390293 -18894019 - B2_Mm2 SINE B2 -6 189 1 8 1358 443 245 93 72 chr13 101390293 101390360 -18893952 - L1MA8 LINE L1 -420 5871 5819 8 1358 304 223 91 81 chr13 101390353 101390496 -18893816 + L1MC4 LINE L1 5346 5483 -961 8 1358 269 209 27 0 chr13 101390604 101390674 -18893638 + B1_Mus1 SINE Alu 20 93 -54 8 1358 345 252 106 10 chr13 101390763 101390867 -18893445 + RSINE1 SINE B4 3 116 -49 8 1358 820 168 14 7 chr13 101390910 101391048 -18893264 + B1_Mus2 SINE Alu 3 141 -6 8 1358 209 163 0 20 chr13 101391185 101391235 -18893077 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1358 1667 31 5 0 chr13 101391247 101391439 -18892873 + B2_Mm1t SINE B2 1 193 0 8 1358 738 271 174 12 chr13 101391490 101391737 -18892575 + B4 SINE B4 2 288 -4 8 1358 342 0 0 0 chr13 101391746 101391784 -18892528 + (CA)n Simple_repeat Simple_repeat 2 39 0 8 1358 652 186 25 88 chr13 101391921 101392080 -18892232 - B1_Mur3 SINE Alu 0 149 1 8 1358 255 325 0 0 chr13 101392167 101392250 -18892062 + L1MC4 LINE L1 6520 6602 -1440 8 1358 469 280 84 17 chr13 101392318 101392496 -18891816 + B3A SINE B2 9 198 0 8 1358 250 286 87 6 chr13 101392503 101392686 -18891626 + L1MC4 LINE L1 6951 7148 -894 8 1358 728 212 22 0 chr13 101392917 101393054 -18891258 + B1_Mur2 SINE Alu 7 146 -3 8 1358 22 56 0 0 chr13 101393112 101393148 -18891164 + AT_rich Low_complexity Low_complexity 1 36 0 8 1358 460 268 77 23 chr13 101393377 101393507 -18890805 + RSINE1 SINE B4 27 163 -2 8 1358 548 237 30 0 chr13 101393679 101393814 -18890498 - B1F1 SINE Alu 0 149 11 8 1358 324 205 24 49 chr13 101394035 101394117 -18890195 - PB1D10 SINE Alu -15 102 23 8 1358 433 239 18 35 chr13 101394807 101394920 -18889392 - PB1D10 SINE Alu -2 115 5 8 1358 906 151 7 7 chr13 101395320 101395467 -18888845 + B1_Mus1 SINE Alu 2 148 0 8 1358 667 180 0 0 chr13 101395573 101395684 -18888628 - B1_Mus1 SINE Alu -37 111 1 8 1358 417 237 0 95 chr13 101395581 101395707 -18888605 - MT2B LTR ERVL -344 257 144 8 1358 327 310 70 0 chr13 101395747 101395876 -18888436 + MER3 DNA MER1_type 1 138 -71 8 1358 352 276 20 20 chr13 101395948 101396048 -18888264 + PB1 SINE Alu 4 103 -24 8 1358 239 329 12 12 chr13 101396076 101396159 -18888153 + B4A SINE B4 2 84 -208 8 1358 186 43 0 0 chr13 101396263 101396286 -18888026 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 8 1358 1224 27 7 0 chr13 101396315 101396461 -18887851 - B1_Mus1 SINE Alu 0 148 2 8 1358 426 239 0 35 chr13 101396499 101396612 -18887700 + B3A SINE B2 2 110 -88 8 1358 22 35 0 0 chr13 101396645 101396674 -18887638 + AT_rich Low_complexity Low_complexity 1 29 0 8 1358 1630 36 5 0 chr13 101396678 101396870 -18887442 + B2_Mm1t SINE B2 1 193 0 8 1358 1058 45 52 0 chr13 101396872 101397027 -18887285 + B2_Mm1a SINE B2 27 189 -4 8 1358 21 0 0 0 chr13 101397036 101397057 -18887255 + AT_rich Low_complexity Low_complexity 1 21 0 8 1358 383 230 0 0 chr13 101397064 101397138 -18887174 + B3A SINE B2 1 74 -124 8 1358 268 129 31 31 chr13 101397164 101397228 -18887084 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 8 1358 1360 123 66 0 chr13 101398867 101399079 -18885233 - URR1A DNA MER1_type 0 226 1 8 1358 24 53 0 0 chr13 101399538 101399576 -18884736 + AT_rich Low_complexity Low_complexity 1 38 0 8 1358 1362 98 16 0 chr13 101399595 101399778 -18884534 + B2_Mm2 SINE B2 1 186 -9 8 1358 647 89 107 0 chr13 101399894 101400006 -18884306 + B1_Mus2 SINE Alu 3 126 -21 9 1358 1099 185 50 10 chr13 101400061 101400263 -18884049 + B3 SINE B2 4 213 -3 9 1358 207 0 0 0 chr13 101400476 101400499 -18883813 + (CAGA)n Simple_repeat Simple_repeat 4 26 0 9 1358 651 200 15 0 chr13 101400563 101400693 -18883619 - B1_Mm SINE Alu -6 141 10 9 1358 21 0 0 0 chr13 101401593 101401614 -18882698 + AT_rich Low_complexity Low_complexity 1 21 0 9 1358 847 227 51 17 chr13 101401829 101402004 -18882308 - B3 SINE B2 -34 182 2 9 1358 686 253 6 41 chr13 101402280 101402449 -18881863 + RSINE1 SINE B4 3 165 0 9 1358 224 343 0 0 chr13 101402575 101402645 -18881667 - ID4_ SINE ID -2 81 12 9 1358 378 0 0 0 chr13 101402665 101402707 -18881605 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 1358 922 184 7 0 chr13 101402975 101403122 -18881190 + B1_Mur4 SINE Alu 1 148 -2 9 1358 334 131 143 0 chr13 101404174 101404244 -18880068 + B1_Mus1 SINE Alu 38 120 0 9 1358 244 211 0 50 chr13 101404257 101404317 -18879995 + B3A SINE B2 2 58 -140 9 1358 21 0 0 0 chr13 101404344 101404365 -18879947 + AT_rich Low_complexity Low_complexity 1 21 0 9 1358 1663 257 59 77 chr13 101404376 101404984 -18879328 + Lx8 LINE L1 6413 7009 -464 9 1358 565 224 44 15 chr13 101405026 101405162 -18879150 - B1_Mur2 SINE Alu 0 149 10 9 1358 1301 113 11 0 chr13 101405181 101405367 -18878945 - B2_Mm1t SINE B2 -5 188 1 9 1358 1439 81 5 0 chr13 101405376 101405562 -18878750 - B2_Mm1a SINE B2 -6 187 1 9 1358 500 208 33 11 chr13 101405585 101405725 -18878587 - B1F2 SINE Alu -1 149 1 9 1358 304 211 41 99 chr13 101405986 101406107 -18878205 - PB1D9 SINE Alu -2 118 5 9 1358 299 287 96 0 chr13 101406239 101406333 -18877979 + PB1D10 SINE Alu 7 109 -8 9 1358 292 279 28 46 chr13 101406333 101406348 -18877964 + ID_B1 SINE B4 88 194 -30 9 1358 256 204 37 0 chr13 101406362 101406416 -18877896 + RSINE1 SINE B4 56 111 -54 9 1358 1612 52 0 0 chr13 101406504 101406697 -18877615 + B2_Mm1a SINE B2 1 193 0 9 1358 646 55 0 0 chr13 101407304 101407395 -18876917 - B2_Mm1t SINE B2 -2 191 101 9 1358 1669 27 0 0 chr13 101407451 101407639 -18876673 + B2_Mm1a SINE B2 1 188 -5 9 1358 300 286 39 0 chr13 101407649 101407726 -18876586 + B4A SINE B4 1 80 -212 9 1358 1473 88 0 5 chr13 101407885 101408080 -18876232 + B2_Mm2 SINE B2 1 194 -1 9 1358 300 91 0 0 chr13 101408087 101408131 -18876181 + (GGGGA)n Simple_repeat Simple_repeat 3 46 0 9 1358 357 114 380 0 chr13 101408464 101408543 -18875769 - PB1D9 SINE Alu -11 109 1 9 1358 412 248 0 98 chr13 101408556 101408699 -18875613 + MT2B LTR ERVL 136 264 -337 9 1358 899 78 0 0 chr13 101408596 101408724 -18875588 + B1_Mus2 SINE Alu 10 137 -10 9 1358 701 205 16 8 chr13 101408807 101408965 -18875347 - B3A SINE B2 -49 167 8 9 1358 793 166 272 0 chr13 101409251 101409420 -18874892 + B3 SINE B2 2 216 0 9 1358 422 196 65 0 chr13 101409511 101409603 -18874709 + PB1D9 SINE Alu 23 120 0 9 1358 379 191 273 0 chr13 101409735 101409845 -18874467 + B1F SINE Alu 1 140 -9 9 1358 1082 41 0 88 chr13 101409942 101410101 -18874211 + B1_Mus1 SINE Alu 3 147 -1 9 1358 1123 129 53 0 chr13 101410226 101410397 -18873915 + B2_Mm2 SINE B2 2 181 -14 9 1358 1149 56 0 0 chr13 101410433 101410575 -18873737 - B1_Mus1 SINE Alu -5 143 2 9 1358 997 136 50 45 chr13 101410575 101410776 -18873536 - URR1B DNA MER1_type -4 221 20 9 1358 882 169 84 5 chr13 101410920 101411110 -18873202 - MTD LTR MaLR -8 411 207 9 1358 258 57 0 0 chr13 101411103 101411138 -18873174 - B1_Mus2 SINE Alu -111 36 2 9 1358 334 251 23 100 chr13 101411214 101411324 -18872988 + PB1 SINE Alu 18 120 0 9 1358 351 0 0 0 chr13 101411443 101411482 -18872830 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 9 1358 1131 58 13 6 chr13 101411484 101411640 -18872672 - B2_Mm2 SINE B2 -37 158 2 9 1358 27 0 0 0 chr13 101411896 101411923 -18872389 + AT_rich Low_complexity Low_complexity 1 27 0 9 1358 511 175 51 26 chr13 101411958 101412075 -18872237 - PB1D9 SINE Alu 0 120 1 9 1358 297 128 0 0 chr13 101412127 101412174 -18872138 + (T)n Simple_repeat Simple_repeat 1 47 0 9 1358 877 160 0 0 chr13 101412174 101412318 -18871994 - B1_Mur3 SINE Alu 0 149 6 9 1358 1056 108 108 0 chr13 101412428 101412604 -18871708 + B2_Mm2 SINE B2 1 195 0 9 1358 542 246 32 16 chr13 101413170 101413294 -18871018 + B1F SINE Alu 2 127 -22 9 1358 455 175 9 102 chr13 101413293 101413401 -18870911 + PB1D9 SINE Alu 17 114 -6 9 1358 1016 208 34 5 chr13 101413661 101413869 -18870443 + B3 SINE B2 3 216 0 9 1358 25 31 0 0 chr13 101413922 101413954 -18870358 + AT_rich Low_complexity Low_complexity 1 32 0 9 1358 246 108 0 0 chr13 101414000 101414037 -18870275 - RSINE1 SINE B4 -51 114 78 9 1358 969 186 79 15 chr13 101414085 101414287 -18870025 - B3 SINE B2 -1 215 1 9 1358 472 205 122 8 chr13 101414536 101414659 -18869653 - B1_Mur1 SINE Alu -2 147 11 9 1358 1163 82 0 0 chr13 101414696 101414843 -18869469 + B1_Mus1 SINE Alu 2 148 0 9 1358 21 0 0 0 chr13 101414845 101414866 -18869446 + AT_rich Low_complexity Low_complexity 1 21 0 9 1358 293 268 108 23 chr13 101415310 101415440 -18868872 - B1F SINE Alu -7 142 2 9 1358 243 275 29 0 chr13 101415456 101415525 -18868787 - PB1D10 SINE Alu -5 112 42 9 1358 320 255 84 47 chr13 101415724 101415831 -18868481 - PB1D10 SINE Alu -6 111 1 9 1358 600 264 45 45 chr13 101415919 101416074 -18868238 - RSINE1 SINE B4 -8 157 3 9 1358 509 342 20 0 chr13 101416095 101416244 -18868068 - RSINE1 SINE B4 -10 155 4 9 1358 978 220 25 0 chr13 101416289 101416489 -18867823 + B3 SINE B2 2 206 -10 9 1358 1205 62 0 0 chr13 101416598 101416744 -18867568 + B1_Mus2 SINE Alu 2 147 0 9 1358 659 291 71 5 chr13 101416767 101416964 -18867348 + B4A SINE B4 71 280 -12 9 1358 561 99 0 0 chr13 101417001 101417082 -18867230 + B2_Mm2 SINE B2 2 82 -113 9 1358 1352 82 22 5 chr13 101417090 101417274 -18867038 - B2_Mm2 SINE B2 -8 187 1 9 1358 740 132 108 0 chr13 101417280 101417409 -18866903 - B1_Mus1 SINE Alu -1 147 5 9 1358 644 197 80 0 chr13 101417697 101417834 -18866478 + B1_Mus1 SINE Alu 1 148 0 9 1358 636 141 305 6 chr13 101418087 101418251 -18866061 - B3 SINE B2 -3 213 1 9 1358 1635 47 0 0 chr13 101418911 101419103 -18865209 + B2_Mm1t SINE B2 2 193 0 9 1358 468 207 215 0 chr13 101419301 101419422 -18864890 + B1_Mus2 SINE Alu 1 147 0 9 1358 198 118 0 0 chr13 101419423 101419457 -18864855 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 9 1358 1486 63 0 16 chr13 101419944 101420136 -18864176 + B2_Mm1a SINE B2 1 189 -4 9 1358 21 0 0 0 chr13 101421824 101421845 -18862467 + AT_rich Low_complexity Low_complexity 1 21 0 9 1358 421 272 104 12 chr13 101422296 101422447 -18861865 + ID_B1 SINE B4 3 161 -63 9 1358 1245 27 0 13 chr13 101422714 101422864 -18861448 + B1_Mus1 SINE Alu 1 148 0 9 1358 1382 82 38 0 chr13 101423131 101423315 -18860997 - B2_Mm2 SINE B2 -4 191 1 9 1358 215 31 0 30 chr13 101423341 101423374 -18860938 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 9 1358 1235 34 0 0 chr13 101423393 101423539 -18860773 - B1_Mus2 SINE Alu 0 147 2 9 1358 1132 83 0 0 chr13 101423630 101423775 -18860537 - B1_Mm SINE Alu -1 146 2 9 1358 695 182 41 27 chr13 101423912 101424059 -18860253 - B1_Mur2 SINE Alu 0 149 1 9 1358 29 60 0 0 chr13 101424867 101424917 -18859395 + AT_rich Low_complexity Low_complexity 1 50 0 9 1358 297 135 0 0 chr13 101425742 101425794 -18858518 + (ATG)n Simple_repeat Simple_repeat 2 53 0 9 1358 521 169 118 37 chr13 101426127 101426262 -18858050 - B1_Mur2 SINE Alu -1 148 3 9 1358 225 0 0 0 chr13 101426427 101426452 -18857860 + (T)n Simple_repeat Simple_repeat 1 25 0 9 1358 396 73 0 0 chr13 101426473 101426528 -18857784 + L1_Mus2 LINE L1 6512 6566 0 9 1358 994 148 59 0 chr13 101426558 101426727 -18857585 - B2_Mm1t SINE B2 -14 179 1 9 1358 259 222 34 80 chr13 101426817 101426905 -18857407 - B3 SINE B2 -22 194 111 9 1358 411 152 0 0 chr13 101426924 101426990 -18857322 - B1_Mur4 SINE Alu -83 67 2 9 1358 1147 49 0 0 chr13 101427622 101427764 -18856548 + B1_Mus1 SINE Alu 1 142 -6 9 1358 24 0 0 0 chr13 101427766 101427790 -18856522 + AT_rich Low_complexity Low_complexity 1 24 0 9 1358 356 0 23 0 chr13 101427977 101428021 -18856291 + (TATG)n Simple_repeat Simple_repeat 4 48 0 9 1358 384 286 107 0 chr13 101428040 101428152 -18856160 - RSINE1 SINE B4 -31 134 11 9 1358 1170 74 0 0 chr13 101428701 101428849 -18855463 + B1_Mus1 SINE Alu 1 148 0 9 1358 599 162 188 0 chr13 101428874 101428991 -18855321 + B1_Mus1 SINE Alu 1 139 -9 9 1358 1173 49 14 0 chr13 101429177 101429321 -18854991 + B1_Mm SINE Alu 1 146 -1 9 1358 1341 88 22 5 chr13 101429341 101429525 -18854787 + B2_Mm2 SINE B2 1 187 -8 9 1358 333 257 228 0 chr13 101429550 101429721 -18854591 + B3 SINE B2 1 210 -6 9 1358 813 157 118 24 chr13 101429927 101430097 -18854215 + B2_Mm2 SINE B2 2 187 -8 1 1358 180 0 0 0 chr13 101430129 101430149 -18854163 + (TG)n Simple_repeat Simple_repeat 2 21 0 1 1358 470 257 82 20 chr13 101430152 101430299 -18854013 - B3A SINE B2 -42 156 1 1 1358 238 229 122 20 chr13 101430320 101430418 -18853894 + ORR1E LTR MaLR 67 174 -185 1 1358 686 223 108 0 chr13 101430539 101430687 -18853625 - B3 SINE B2 -52 164 1 1 1358 676 113 9 0 chr13 101430709 101430815 -18853497 + BC1_Mm scRNA scRNA 1 107 -45 1 1358 340 219 0 0 chr13 101430853 101430917 -18853395 - ID4 SINE ID -19 64 1 1 1358 248 213 0 0 chr13 101431052 101431099 -18853213 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1358 869 163 54 33 chr13 101431099 101431283 -18853029 - B2_Mm2 SINE B2 -7 188 1 1 1358 1254 112 67 0 chr13 101431294 101431473 -18852839 - B2_Mm2 SINE B2 -4 191 1 1 1358 203 119 23 23 chr13 101431514 101431557 -18852755 + T-rich Low_complexity Low_complexity 3 45 0 1 1358 648 157 16 8 chr13 101431561 101431683 -18852629 - B1_Mus1 SINE Alu -2 146 24 1 1358 573 182 143 66 chr13 101431856 101432038 -18852274 + B3A SINE B2 3 198 0 1 1358 406 269 28 0 chr13 101432044 101432152 -18852160 + PB1D9 SINE Alu 1 111 -9 1 1358 679 108 33 0 chr13 101432193 101432313 -18851999 + B1_Mus1 SINE Alu 2 125 -23 1 1358 279 138 35 0 chr13 101432310 101432368 -18851944 + B1_Mm SINE Alu 64 123 -24 1 1358 392 97 15 0 chr13 101432338 101432432 -18851880 + B1_Mur2 SINE Alu 65 131 -18 1 1358 313 125 31 0 chr13 101432424 101432516 -18851796 + B1_Mur2 SINE Alu 65 130 -19 1 1358 310 92 35 0 chr13 101432508 101432590 -18851722 + B1_Mur4 SINE Alu 65 130 -19 1 1358 377 108 15 0 chr13 101432592 101432657 -18851655 + B1_Mur2 SINE Alu 65 130 -19 1 1358 263 89 71 0 chr13 101432650 101432706 -18851606 + B1_Mm SINE Alu 64 123 -24 1 1358 333 97 41 0 chr13 101432677 101432762 -18851550 + B1F SINE Alu 64 130 -19 1 1358 338 94 31 0 chr13 101432761 101432825 -18851487 + B1F SINE Alu 65 130 -19 1 1358 290 96 19 0 chr13 101432822 101432874 -18851438 + B1_Mus2 SINE Alu 69 121 -26 1 1358 352 88 31 0 chr13 101432845 101432937 -18851375 + B1F SINE Alu 65 130 -19 1 1358 296 88 32 0 chr13 101432937 101433011 -18851301 + B1_Mur4 SINE Alu 66 130 -19 1 1358 352 88 31 0 chr13 101432985 101433077 -18851235 + B1F SINE Alu 65 130 -19 1 1358 313 85 34 0 chr13 101433069 101433128 -18851184 + B1_Mur4 SINE Alu 66 126 -24 1 1358 461 226 58 36 chr13 101433141 101433279 -18851033 + B3A SINE B2 2 142 -56 1 1358 21 0 0 0 chr13 101433292 101433313 -18850999 + AT_rich Low_complexity Low_complexity 1 21 0 1 1358 1004 89 14 0 chr13 101433320 101433466 -18850846 - B1_Mur3 SINE Alu 0 149 2 1 1358 398 243 19 10 chr13 101433508 101433612 -18850700 + PB1D10 SINE Alu 1 105 -12 1 1358 239 29 0 0 chr13 101433935 101433969 -18850343 - B1_Mur4 SINE Alu -113 37 4 1 1358 452 146 16 112 chr13 101434391 101434505 -18849807 - B1_Mus2 SINE Alu -29 121 1 1 1358 216 86 0 0 chr13 101435008 101435043 -18849269 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1358 1035 87 0 0 chr13 101435043 101435181 -18849131 - B1_Mus2 SINE Alu -9 138 1 1 1358 1670 21 0 20 chr13 101435252 101435448 -18848864 - B2_Mm1t SINE B2 -1 192 1 1 1358 392 183 12 22 chr13 101436013 101436104 -18848208 + B1_Mur1 SINE Alu 29 149 0 1 1358 252 276 48 66 chr13 101436416 101436583 -18847729 + RSINE1 SINE B4 2 165 0 1 1358 322 200 57 40 chr13 101436609 101436756 -18847556 + B4A SINE B4 2 199 -93 1 1358 625 274 52 121 chr13 101437493 101437800 -18846512 + B4 SINE B4 2 287 -5 1 1358 714 210 35 0 chr13 101437901 101438044 -18846268 + B1_Mus1 SINE Alu 1 148 0 1 1358 1252 28 0 7 chr13 101438074 101438220 -18846092 + B1_Mus1 SINE Alu 2 146 -2 1 1358 1386 162 182 46 chr13 101438320 101438649 -18845663 - ORR1D1 LTR MaLR 0 374 1 1 1358 527 244 100 44 chr13 101440102 101440351 -18843961 + L1MD3 LINE L1 7729 7991 -4 1 1358 183 271 14 41 chr13 101441296 101441369 -18842943 + MIRc SINE MIR 40 110 -158 1 1358 26 0 0 0 chr13 101441504 101441530 -18842782 + AT_rich Low_complexity Low_complexity 1 26 0 1 1358 213 200 133 0 chr13 101441595 101441655 -18842657 - B1F SINE Alu -48 101 34 1 1358 1431 116 12 0 chr13 101441722 101441963 -18842349 + RMER6C LTR ERVK 447 690 0 1 1358 204 167 0 0 chr13 101442241 101442269 -18842043 + A-rich Low_complexity Low_complexity 1 28 0 1 1358 1264 20 0 7 chr13 101442269 101442417 -18841895 + B1_Mus2 SINE Alu 1 147 0 1 1358 204 167 0 0 chr13 101442417 101442448 -18841864 + A-rich Low_complexity Low_complexity 29 59 0 1 1358 938 167 0 0 chr13 101442459 101442603 -18841709 + B1_Mus1 SINE Alu 3 146 -2 1 1358 263 246 16 32 chr13 101442610 101442673 -18841639 + ID4_ SINE ID 8 69 -14 1 1358 248 297 40 26 chr13 101442673 101442686 -18841626 + ID SINE ID 8 84 -140 1 1358 606 221 27 7 chr13 101442814 101442960 -18841352 + B1F1 SINE Alu 1 149 0 1 1358 313 204 71 88 chr13 101442965 101443078 -18841234 + B1F1 SINE Alu 7 117 -32 1 1358 301 288 0 0 chr13 101443387 101443453 -18840859 - ID4_ SINE ID -13 70 5 1 1358 1179 99 41 0 chr13 101443478 101443649 -18840663 + B2_Mm1t SINE B2 2 179 -14 1 1358 1186 68 0 0 chr13 101443702 101443849 -18840463 + B1_Mm SINE Alu 1 147 0 1 1358 631 263 68 58 chr13 101443972 101444178 -18840134 - ID_B1 SINE B4 -16 208 1 1 1358 548 99 0 0 chr13 101444499 101444580 -18839732 + B1_Mus1 SINE Alu 3 83 -65 1 1358 261 0 0 0 chr13 101444647 101444676 -18839636 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1 1358 950 39 132 16 chr13 101444683 101444812 -18839500 - B1_Mm SINE Alu -2 145 2 1 1358 1475 59 38 0 chr13 101444820 101445006 -18839306 - B2_Mm2 SINE B2 -1 194 2 1 1358 333 0 0 0 chr13 101445107 101445144 -18839168 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 1 1358 929 142 0 26 chr13 101445216 101445368 -18838944 + B1_Mur3 SINE Alu 2 149 0 1 1358 897 96 7 0 chr13 101445612 101445748 -18838564 - B1_Mus2 SINE Alu -1 146 10 1 1358 384 167 16 107 chr13 101445645 101445766 -18838546 - MT2B LTR ERVL -337 264 155 1 1358 29 0 0 0 chr13 101445908 101445937 -18838375 + AT_rich Low_complexity Low_complexity 1 29 0 1 1358 814 212 49 10 chr13 101446982 101447187 -18837125 - B3 SINE B2 0 216 4 1 1358 1186 81 0 6 chr13 101447359 101447534 -18836778 - B2_Mm2 SINE B2 -20 175 2 1 1358 239 122 0 20 chr13 101447534 101447584 -18836728 + (TCC)n Simple_repeat Simple_repeat 3 51 0 1 1358 240 59 0 0 chr13 101447620 101447654 -18836658 + (TTGG)n Simple_repeat Simple_repeat 2 35 0 1 1358 1237 14 0 0 chr13 101447657 101447797 -18836515 - B1_Mm SINE Alu -7 140 1 1 1358 455 268 0 0 chr13 101448336 101448448 -18835864 - RSINE1 SINE B4 -51 114 3 1 1358 31 26 0 0 chr13 101448971 101449009 -18835303 + AT_rich Low_complexity Low_complexity 1 38 0 1 1358 798 200 0 0 chr13 101449083 101449223 -18835089 - B1_Mur3 SINE Alu -9 140 1 1 1358 828 59 25 0 chr13 101449468 101449586 -18834726 - B1_Mus1 SINE Alu 0 148 28 1 169 354 213 0 0 chr13 101449609 101449759 -18834553 + CT-rich Low_complexity Low_complexity 2 151 0 1 1359 604 241 36 0 chr13 101449765 101449902 -18834410 - RSINE1 SINE B4 -22 143 2 1 1359 256 356 71 40 chr13 101450543 101450897 -18833415 - MLT1C LTR MaLR -4 463 99 1 1359 2278 150 87 24 chr13 101451095 101451553 -18832759 - RLTR19A LTR ERVK 0 496 10 1 1359 268 207 107 0 chr13 101451871 101451960 -18832352 + PB1D10 SINE Alu 12 110 -7 1 1359 234 0 0 0 chr13 101451964 101451990 -18832322 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1359 912 237 0 39 chr13 101452073 101452279 -18832033 + B3A SINE B2 1 198 0 1 1359 1204 61 0 0 chr13 101452362 101452509 -18831803 + B1_Mus2 SINE Alu 1 147 0 1 1359 200 56 0 77 chr13 101452509 101452548 -18831764 + (A)n Simple_repeat Simple_repeat 1 36 0 1 1359 213 114 0 28 chr13 101452645 101452681 -18831631 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1359 336 24 0 0 chr13 101453117 101453158 -18831154 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1359 1041 108 90 6 chr13 101453158 101453325 -18830987 - B2_Mm2 SINE B2 -13 182 2 1 1359 894 149 29 96 chr13 101453467 101453675 -18830637 - B2_Mm2 SINE B2 -1 194 1 1 1359 909 134 42 0 chr13 101453698 101453840 -18830472 - B1_Mur4 SINE Alu -1 149 2 1 1359 917 31 137 23 chr13 101453975 101454106 -18830206 - B1_Mus2 SINE Alu -1 146 1 1 1359 482 313 5 63 chr13 101454449 101454640 -18829672 - B3A SINE B2 -17 181 2 1 1359 228 35 0 0 chr13 101454762 101454791 -18829521 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 1359 522 178 0 63 chr13 101454935 101455061 -18829251 + PB1D9 SINE Alu 2 119 -1 1 1359 1262 46 0 34 chr13 101455064 101455243 -18829069 + B2_Mm2 SINE B2 1 173 -22 1 1359 435 290 16 8 chr13 101455297 101455422 -18828890 + B1F1 SINE Alu 17 142 -7 1 1359 387 262 115 10 chr13 101455443 101455547 -18828765 + PB1D10 SINE Alu 1 115 -2 1 1359 368 282 97 0 chr13 101455556 101455659 -18828653 + ID_B1 SINE B4 92 204 -20 1 1359 679 262 122 13 chr13 101455726 101455946 -18828366 - L1MB3 LINE L1 -159 6024 5772 1 1359 396 0 0 0 chr13 101455946 101455990 -18828322 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1359 679 262 122 13 chr13 101455990 101456071 -18828241 - L1MB3 LINE L1 -412 5771 5691 1 1359 315 0 0 0 chr13 101456116 101456151 -18828161 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1359 927 73 232 7 chr13 101456163 101456314 -18827998 + B2_Mm2 SINE B2 2 186 -9 1 1359 348 389 0 0 chr13 101456384 101456633 -18827679 + C-rich Low_complexity Low_complexity 1 249 0 1 1359 441 287 57 0 chr13 101456776 101456898 -18827414 + RSINE1 SINE B4 8 136 -29 1 1359 277 43 21 21 chr13 101456914 101456962 -18827350 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 1 1359 345 47 0 0 chr13 101457249 101457292 -18827020 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1359 659 241 7 7 chr13 101457423 101457569 -18826743 + B1_Mur1 SINE Alu 2 147 -2 1 1359 571 79 18 114 chr13 101457680 101457794 -18826518 + B1_Mur4 SINE Alu 1 103 -46 1 1359 596 250 15 0 chr13 101457954 101458090 -18826222 + B1F1 SINE Alu 12 149 0 1 1359 825 133 26 53 chr13 101458586 101458737 -18825575 - B1_Mus2 SINE Alu 0 147 1 1 1359 1475 220 31 23 chr13 101458844 101459197 -18825115 - RLTR30 LTR ERV1 -17 362 7 1 1359 1382 75 11 5 chr13 101459243 101459432 -18824880 - B2_Mm1t SINE B2 -2 191 2 1 1359 269 45 0 83 chr13 101459447 101459465 -18824847 + (A)n Simple_repeat Simple_repeat 1 15 0 1 1359 1140 82 0 0 chr13 101459465 101459611 -18824701 + B1_Mm SINE Alu 2 147 0 1 1359 269 45 0 83 chr13 101459611 101459640 -18824672 + (A)n Simple_repeat Simple_repeat 1 29 0 1 1359 269 112 75 43 chr13 101459672 101459735 -18824577 - B2_Mm2 SINE B2 -107 109 47 1 1359 1120 90 6 6 chr13 101459786 101459953 -18824359 - B2_Mm1t SINE B2 -26 167 1 1 1359 528 130 11 11 chr13 101459985 101460078 -18824234 + B3 SINE B2 36 128 -88 1 1359 1424 54 43 21 chr13 101461137 101461325 -18822987 + B2_Mm2 SINE B2 2 193 -2 1 1359 1361 80 5 31 chr13 101461691 101461885 -18822427 - B2_Mm2 SINE B2 -6 189 1 1 1359 27 81 0 0 chr13 101462058 101462120 -18822192 + AT_rich Low_complexity Low_complexity 1 62 0 1 1359 610 211 125 0 chr13 101462984 101463112 -18821200 - B1_Mus2 SINE Alu 0 147 4 1 1359 1202 41 14 0 chr13 101463835 101463980 -18820332 - B1_Mus2 SINE Alu 0 147 1 1 1359 434 111 0 7 chr13 101463980 101464060 -18820252 - MTB_Mm LTR MaLR -209 210 133 1 1359 1503 75 9 14 chr13 101464621 101464838 -18819474 - L1_Mus3 LINE L1 -3 6635 6420 1 1359 302 276 74 41 chr13 101465262 101465383 -18818929 - RSINE1 SINE B4 -11 154 30 1 1359 385 245 67 93 chr13 101465442 101465617 -18818695 + B3A SINE B2 1 170 -46 1 1359 240 111 0 0 chr13 101465617 101465653 -18818659 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1359 358 165 323 20 chr13 101465653 101465752 -18818560 + B1_Mus1 SINE Alu 1 129 -19 1 1359 315 302 50 94 chr13 101465752 101465776 -18818536 + B3 SINE B2 171 191 -25 1 1359 353 303 75 8 chr13 101465766 101465899 -18818413 + RSINE1 SINE B4 24 165 0 1 1359 314 320 114 59 chr13 101466340 101466418 -18817894 + MT2B2 LTR ERVL 9 99 -485 1 1359 371 291 151 21 chr13 101466418 101466604 -18817708 + ID_B1 SINE B4 1 210 -14 1 1359 677 169 29 22 chr13 101466481 101466620 -18817692 + B1_Mus2 SINE Alu 8 147 0 1 1359 282 260 29 39 chr13 101466623 101466727 -18817585 + ID_B1 SINE B4 52 154 -70 1 1359 335 253 0 12 chr13 101466659 101466743 -18817569 + B1F SINE Alu 10 92 -57 1 1359 1023 64 50 0 chr13 101466758 101466898 -18817414 + B1_Mus2 SINE Alu 1 147 0 1 1359 22 0 0 0 chr13 101466898 101466920 -18817392 + AT_rich Low_complexity Low_complexity 1 22 0 1 1359 494 291 43 70 chr13 101467258 101467557 -18816755 + B4 SINE B4 1 291 -1 1 1359 300 268 144 0 chr13 101467699 101467796 -18816516 + RSINE1 SINE B4 49 159 -6 1 1359 339 128 214 34 chr13 101468523 101468612 -18815700 + PB1D10 SINE Alu 1 105 -12 1 1359 518 274 73 33 chr13 101468642 101468793 -18815519 + RSINE1 SINE B4 7 163 -2 1 1359 239 313 39 39 chr13 101469480 101469633 -18814679 + RMER15 LTR ERVL 353 505 -70 1 1359 779 137 145 0 chr13 101469800 101469931 -18814381 + B1_Mur4 SINE Alu 1 150 0 1 1359 210 257 143 0 chr13 101469958 101470028 -18814284 + PB1D10 SINE Alu 7 86 -31 1 1359 320 242 131 98 chr13 101470126 101470309 -18814003 + ID_B1 SINE B4 1 189 -35 1 1359 365 191 142 0 chr13 101470223 101470326 -18813986 + B1_Mus1 SINE Alu 10 116 -1 1 1359 572 258 387 4 chr13 101470365 101470624 -18813688 + ORR1E LTR MaLR 1 357 -2 1 1359 1131 28 7 0 chr13 101470652 101470796 -18813516 + MTA_Mm LTR MaLR 198 342 -54 1 1359 1197 42 7 0 chr13 101471270 101471414 -18812898 + B1_Mus2 SINE Alu 2 146 -1 1 1359 253 321 97 0 chr13 101471475 101471609 -18812703 + MER34 LTR ERV1 196 342 -200 1 1359 417 214 0 55 chr13 101471626 101471735 -18812577 - B1_Mur4 SINE Alu -2 145 43 1 1359 276 288 63 21 chr13 101471813 101471955 -18812357 - B1F SINE Alu 0 149 2 1 1359 759 216 20 0 chr13 101472112 101472260 -18812052 + B3 SINE B2 8 158 -58 1 1359 327 250 162 8 chr13 101472402 101472519 -18811793 - B1_Mur2 SINE Alu -13 136 2 1 1359 576 205 90 0 chr13 101472733 101472855 -18811457 - B1_Mur1 SINE Alu -7 142 10 1 1359 21 57 0 0 chr13 101473261 101473296 -18811016 + AT_rich Low_complexity Low_complexity 1 35 0 1 1359 1051 188 33 9 chr13 101473564 101473774 -18810538 + B3 SINE B2 2 216 0 1 1359 302 280 165 25 chr13 101473806 101473927 -18810385 + B1_Mur1 SINE Alu 3 140 -9 1 1359 466 275 87 6 chr13 101473928 101474111 -18810201 + B3A SINE B2 1 198 0 1 1359 403 228 169 23 chr13 101474531 101474661 -18809651 - B1F1 SINE Alu 0 149 1 1 1359 2785 28 0 0 chr13 101474709 101475032 -18809280 + L1Md_T LINE L1 6260 6582 0 1 1359 581 196 14 43 chr13 101475188 101475317 -18808995 + B1_Mm SINE Alu 12 138 -9 1 1359 198 0 0 0 chr13 101475317 101475339 -18808973 + (CCAA)n Simple_repeat Simple_repeat 2 23 0 1 1359 657 191 8 0 chr13 101475428 101475554 -18808758 + B1_Mus1 SINE Alu 10 136 -12 1 1359 259 265 15 0 chr13 101475590 101475658 -18808654 + ID_B1 SINE B4 155 223 -1 1 1359 915 186 83 0 chr13 101475669 101475862 -18808450 + B3 SINE B2 3 211 -5 1 1359 1440 59 16 26 chr13 101475930 101476122 -18808190 - B2_Mm2 SINE B2 -5 190 1 1 1359 309 296 161 38 chr13 101476510 101477068 -18807244 + L1MD LINE L1 4165 4791 -1355 1 1359 1441 69 16 0 chr13 101477359 101477548 -18806764 - B2_Mm1t SINE B2 -1 192 1 1 1359 328 279 0 11 chr13 101477724 101477811 -18806501 - B4A SINE B4 -206 86 1 1 1359 861 113 86 0 chr13 101477908 101478059 -18806253 + B2_Mm2 SINE B2 1 164 -31 1 1359 1198 47 0 13 chr13 101478071 101478221 -18806091 - B1_Mus1 SINE Alu 0 148 1 1 1359 195 42 0 0 chr13 101478227 101478251 -18806061 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1359 497 204 72 9 chr13 101478709 101478845 -18805467 - B1_Mur3 SINE Alu 0 147 7 1 1359 624 159 40 74 chr13 101478912 101479061 -18805251 + B1_Mur4 SINE Alu 6 149 -1 1 1359 735 44 0 0 chr13 101479062 101479153 -18805159 + (GA)n Simple_repeat Simple_repeat 1 91 0 1 1359 360 283 93 19 chr13 101479214 101479322 -18804990 + B1_Mur1 SINE Alu 7 122 -27 1 1359 25 31 0 0 chr13 101479340 101479372 -18804940 + AT_rich Low_complexity Low_complexity 1 32 0 1 1359 413 265 31 0 chr13 101479751 101479849 -18804463 - B1F2 SINE Alu -1 148 48 1 1359 309 242 15 0 chr13 101479874 101479940 -18804372 + ID4 SINE ID 14 80 -3 1 1359 387 0 0 0 chr13 101480161 101480204 -18804108 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1359 292 309 72 0 chr13 101480391 101480488 -18803824 + LTR41 LTR ERVL 348 451 -317 1 1359 386 237 230 29 chr13 101480505 101480644 -18803668 - B3 SINE B2 -2 214 48 1 1359 218 267 100 0 chr13 101480885 101480945 -18803367 - PB1D7 SINE Alu -20 100 35 1 1359 248 203 15 119 chr13 101481044 101481111 -18803201 - B4A SINE B4 -230 62 3 1 1359 282 169 58 58 chr13 101481111 101481180 -18803132 + MTEb LTR MaLR 1 69 -310 1 1359 238 235 176 66 chr13 101481224 101481315 -18802997 - PB1D10 SINE Alu -13 104 4 1 1359 3099 131 85 107 chr13 101481630 101481888 -18802424 + RMER6A LTR ERVK 16 324 -432 1 1359 888 81 40 99 chr13 101481888 101482039 -18802273 + B1_Mm SINE Alu 1 142 -5 1 1359 3099 131 85 107 chr13 101482039 101482535 -18801777 + RMER6A LTR ERVK 325 753 -3 1 1359 706 172 82 0 chr13 101482535 101482657 -18801655 - B1_Mur3 SINE Alu -15 134 3 1 1359 195 291 68 0 chr13 101482745 101482848 -18801464 + L2 LINE L2 1689 1798 -1621 1 1359 330 244 101 58 chr13 101482949 101483015 -18801297 - B1F2 SINE Alu -3 146 78 1 1359 1494 68 5 5 chr13 101483015 101483208 -18801104 - B2_Mm1a SINE B2 0 193 1 1 1359 330 244 101 58 chr13 101483208 101483280 -18801032 - B1F2 SINE Alu -72 77 2 1 1359 3278 47 7 12 chr13 101483866 101484275 -18800037 + L1_Mus1 LINE L1 6161 6567 0 1 1359 710 125 200 0 chr13 101484816 101484936 -18799376 + B1_Mus2 SINE Alu 2 145 -2 1 1359 335 291 69 76 chr13 101484961 101485106 -18799206 + ID_B1 SINE B4 81 224 0 1 1359 366 206 51 87 chr13 101485480 101485618 -18798694 + B4A SINE B4 102 234 -58 1 1359 311 264 11 11 chr13 101485610 101485698 -18798614 + B4A SINE B4 6 93 -199 1 1359 675 204 20 34 chr13 101486069 101486216 -18798096 - B1_Mus2 SINE Alu -2 145 1 1 1359 22 35 0 0 chr13 101486219 101486248 -18798064 + AT_rich Low_complexity Low_complexity 1 29 0 1 1359 612 236 105 17 chr13 101486686 101486867 -18797445 - ID_B1 SINE B4 -27 197 1 1 1359 303 269 39 0 chr13 101486873 101486893 -18797419 + B4 SINE B4 66 88 -204 1 1359 351 95 373 0 chr13 101486893 101486976 -18797336 + B1_Mus2 SINE Alu 1 113 -7 1 1359 415 340 14 0 chr13 101487105 101487252 -18797060 + RSINE1 SINE B4 3 151 -14 1 1359 1127 78 0 0 chr13 101487781 101487922 -18796390 + B1_Mus2 SINE Alu 1 141 -6 1 1359 279 0 0 0 chr13 101487930 101487961 -18796351 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1359 466 92 0 0 chr13 101488235 101488300 -18796012 + B1_Mus1 SINE Alu 40 104 -44 1 1359 339 206 27 27 chr13 101488237 101488312 -18796000 + MT2B LTR ERVL 198 272 -329 1 1359 319 251 80 0 chr13 101488792 101488912 -18795400 - L1M5 LINE L1 -827 5617 5488 1 1359 23 33 0 0 chr13 101489351 101489381 -18794931 + AT_rich Low_complexity Low_complexity 1 30 0 1 1359 324 154 16 36 chr13 101489418 101489503 -18794809 - ID4 SINE ID -66 86 5 1 1359 333 198 120 11 chr13 101489511 101489603 -18794709 - B1F2 SINE Alu -7 142 41 1 1359 21 0 0 0 chr13 101489616 101489637 -18794675 + AT_rich Low_complexity Low_complexity 1 21 0 1 1359 467 177 0 110 chr13 101489838 101489965 -18794347 + MT2B LTR ERVL 152 264 -337 1 1359 1088 42 0 0 chr13 101489857 101490000 -18794312 + B1_Mus1 SINE Alu 6 148 0 1 1359 604 205 17 8 chr13 101490010 101490128 -18794184 + PB1D9 SINE Alu 2 120 0 1 1359 687 143 239 11 chr13 101491304 101491482 -18792830 - B2_Mm2 SINE B2 0 195 2 1 1359 742 134 15 0 chr13 101491526 101491660 -18792652 - URR1B DNA MER1_type -3 222 87 1 1359 3855 150 36 28 chr13 101491660 101491949 -18792363 + RLTR17 LTR ERVK 1 289 -403 1 1359 1082 64 29 0 chr13 101491949 101492089 -18792223 - B1_Mus2 SINE Alu -1 146 3 1 1359 3855 150 36 28 chr13 101492089 101492485 -18791827 + RLTR17 LTR ERVK 290 692 0 1 1359 389 263 48 81 chr13 101492733 101492919 -18791393 + B2_Mm2 SINE B2 10 189 -6 1 1359 1234 83 77 16 chr13 101493082 101493265 -18791047 - B2_Mm2 SINE B2 0 195 2 1 1359 271 253 44 78 chr13 101493267 101493357 -18790955 + PB1D9 SINE Alu 28 114 -6 1 1359 336 279 54 9 chr13 101493594 101493706 -18790606 + RSINE1 SINE B4 41 157 -8 1 1359 539 110 26 145 chr13 101493776 101493893 -18790419 + ORR1A2 LTR MaLR 1 103 -224 1 1359 337 205 0 13 chr13 101494077 101494156 -18790156 - RMER17B LTR ERVK 0 958 881 1 1359 524 151 156 16 chr13 101494150 101494278 -18790034 - RMER17B LTR ERVK -207 751 606 1 1359 8534 117 9 18 chr13 101494278 101495538 -18788774 - MERVK26-int LTR ERVK -5671 1248 1 1 1359 252 88 0 0 chr13 101495554 101495588 -18788724 + RLTR26 LTR ERVK 609 642 0 1 1359 326 261 0 0 chr13 101495945 101496010 -18788302 + ID4 SINE ID 6 70 -13 1 1359 22 0 0 0 chr13 101496034 101496056 -18788256 + AT_rich Low_complexity Low_complexity 1 22 0 1 1359 446 287 37 0 chr13 101496056 101496132 -18788180 + B4A SINE B4 7 87 -205 1 1359 272 300 69 10 chr13 101496132 101496233 -18788079 + PB1D10 SINE Alu 2 108 -9 1 1359 405 116 0 0 chr13 101496302 101496371 -18787941 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 1359 300 111 0 0 chr13 101496465 101496510 -18787802 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1359 25 31 0 0 chr13 101496532 101496564 -18787748 + AT_rich Low_complexity Low_complexity 1 32 0 1 1359 1197 55 0 0 chr13 101496564 101496710 -18787602 + B1_Mus2 SINE Alu 2 147 0 1 1359 220 70 47 0 chr13 101496714 101496757 -18787555 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 1 1359 745 267 70 0 chr13 101496757 101496944 -18787368 - B3 SINE B2 -3 213 14 1 1359 1179 55 7 0 chr13 101497275 101497421 -18786891 - B1_Mus1 SINE Alu 0 148 2 1 1359 698 231 102 17 chr13 101497646 101497822 -18786490 + B3 SINE B2 14 204 -12 1 1359 197 350 40 35 chr13 101498053 101498217 -18786095 - L2a LINE L2 -341 3085 2923 1 1359 1165 61 0 7 chr13 101498441 101498452 -18785860 - B1_Mus1 SINE Alu 0 148 138 1 1359 279 0 0 0 chr13 101498452 101498483 -18785829 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1 1359 1165 61 0 7 chr13 101498483 101498619 -18785693 - B1_Mus1 SINE Alu -11 137 2 1 1359 772 144 86 12 chr13 101498619 101498772 -18785540 - B2_Mm2 SINE B2 -26 169 3 1 1359 248 270 0 75 chr13 101498784 101498864 -18785448 - B1F SINE Alu -8 141 68 1 1359 615 240 45 28 chr13 101498911 101499087 -18785225 - B4 SINE B4 0 292 114 1 1359 303 203 0 17 chr13 101499101 101499161 -18785151 - B1F SINE Alu -89 60 2 1 1359 235 284 120 8 chr13 101499162 101499279 -18785033 + RSINE1 SINE B4 29 158 -7 1 1359 245 297 126 40 chr13 101499584 101499735 -18784577 + MIRb SINE MIR 77 240 -28 1 1359 449 194 30 27 chr13 101500080 101500196 -18784116 + B1F2 SINE Alu 1 112 -37 1 1359 1264 126 11 0 chr13 101501489 101501680 -18782632 + B2_Mm1t SINE B2 1 193 0 2 1359 1696 26 0 0 chr13 101501870 101502061 -18782251 + B2_Mm1a SINE B2 2 192 -1 3 1359 800 55 0 0 chr13 101502103 101502212 -18782100 + B1_Mus1 SINE Alu 40 148 0 4 1359 594 121 0 11 chr13 101502228 101502320 -18781992 + B2_Mm2 SINE B2 2 92 -103 5 1359 432 0 0 0 chr13 101502726 101502774 -18781538 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1359 1269 88 55 0 chr13 101502926 101503108 -18781204 + B2_Mm1t SINE B2 2 193 0 7 1359 695 212 0 0 chr13 101503132 101503264 -18781048 + B1_Mur1 SINE Alu 18 149 0 8 1359 280 167 0 0 chr13 101503367 101503415 -18780897 + B1_Mur1 SINE Alu 97 144 -5 9 1359 188 272 135 42 chr13 101503651 101503747 -18780565 - L2 LINE L2 -606 2813 2709 1 1359 1675 26 0 25 chr13 101503948 101504146 -18780166 + B2_Mm1a SINE B2 1 193 0 1 1359 987 165 26 26 chr13 101504176 101504369 -18779943 + B2_Mm2 SINE B2 3 195 0 1 1359 1192 54 0 0 chr13 101504450 101504597 -18779715 - B1_Mm SINE Alu 0 147 1 1 1359 377 209 10 62 chr13 101504597 101504694 -18779618 + B1_Mur1 SINE Alu 58 149 0 1 1359 1065 29 7 0 chr13 101505601 101505739 -18778573 - B1_Mus2 SINE Alu 0 147 9 1 1359 641 174 12 75 chr13 101505739 101505762 -18778550 - ID_B1 SINE B4 0 224 74 1 1359 737 176 14 42 chr13 101506306 101506448 -18777864 - B1F SINE Alu -9 140 3 1 1359 649 213 20 62 chr13 101506479 101506507 -18777805 - B2_Mm2 SINE B2 -8 187 160 1 1359 1200 42 0 0 chr13 101506507 101506650 -18777662 - B1_Mus2 SINE Alu -4 143 1 1 1359 702 166 40 48 chr13 101506650 101506816 -18777496 - B3 SINE B2 -36 159 1 1 1359 1206 118 17 0 chr13 101506835 101507013 -18777299 - B2_Mm2 SINE B2 -11 184 4 2 1359 1047 84 0 33 chr13 101507020 101507204 -18777108 + (GGA)n Simple_repeat Simple_repeat 3 180 0 2 1359 180 176 0 0 chr13 101507204 101507238 -18777074 + GA-rich Low_complexity Low_complexity 3 36 0 2 1359 1130 47 0 50 chr13 101507239 101507616 -18776696 + (GGA)n Simple_repeat Simple_repeat 1 358 0 2 1359 489 0 0 43 chr13 101507616 101507685 -18776627 + (GAA)n Simple_repeat Simple_repeat 3 68 0 2 1359 719 122 77 54 chr13 101507685 101507815 -18776497 + B1_Mur4 SINE Alu 1 133 -17 2 1359 693 215 35 7 chr13 101507908 101508053 -18776259 + B1_Mur2 SINE Alu 1 149 0 2 1359 279 224 0 96 chr13 101508072 101508166 -18776146 - Charlie1b DNA MER1_type 0 523 439 2 1359 1092 62 13 33 chr13 101508197 101508347 -18775965 - B1_Mm SINE Alu 0 147 1 2 1359 328 261 0 0 chr13 101508377 101508446 -18775866 - ID4_ SINE ID -14 69 1 2 1359 2561 68 9 0 chr13 101508475 101508799 -18775513 + ORR1A2 LTR MaLR 1 327 0 3 1359 713 223 84 45 chr13 101509268 101509470 -18774842 + B3 SINE B2 1 210 -6 3 1359 298 224 17 0 chr13 101509502 101509560 -18774752 - B1F SINE Alu -90 59 1 3 1359 188 214 18 0 chr13 101509580 101509636 -18774676 + (TA)n Simple_repeat Simple_repeat 2 58 0 3 1359 225 0 0 0 chr13 101509657 101509682 -18774630 + (CA)n Simple_repeat Simple_repeat 1 25 0 3 1359 235 254 68 0 chr13 101509736 101509795 -18774517 - ID4_ SINE ID -16 67 5 3 1359 294 29 0 0 chr13 101509797 101509832 -18774480 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 3 1359 486 285 0 31 chr13 101509836 101509963 -18774349 - PB1 SINE Alu -3 124 2 3 1359 594 277 34 0 chr13 101509985 101510133 -18774179 + RSINE1 SINE B4 3 155 -10 3 1359 1134 119 6 17 chr13 101510210 101510390 -18773922 + B2_Mm1t SINE B2 2 179 -14 3 1359 214 311 27 13 chr13 101510459 101510534 -18773778 + B3 SINE B2 5 80 -136 4 1359 906 169 78 16 chr13 101510564 101510756 -18773556 + B3 SINE B2 1 204 -12 4 1359 544 242 70 0 chr13 101510825 101510953 -18773359 + B1_Mur1 SINE Alu 1 137 -12 4 1359 650 202 72 62 chr13 101511290 101511485 -18772827 + B3A SINE B2 2 198 0 4 1359 639 133 62 0 chr13 101511622 101511735 -18772577 + B3A SINE B2 3 122 -76 4 1359 523 183 58 8 chr13 101511937 101512058 -18772254 + B1_Mur3 SINE Alu 19 145 -4 4 1359 188 35 35 0 chr13 101512068 101512097 -18772215 + (CAA)n Simple_repeat Simple_repeat 2 31 0 4 1359 235 49 24 24 chr13 101512097 101512139 -18772173 + (CAAA)n Simple_repeat Simple_repeat 3 44 0 4 1359 37 52 0 0 chr13 101512157 101512215 -18772097 + AT_rich Low_complexity Low_complexity 1 58 0 4 1359 313 236 168 9 chr13 101512664 101512771 -18771541 - RSINE1 SINE B4 -29 136 13 4 1359 246 192 0 0 chr13 101512786 101512838 -18771474 + T-rich Low_complexity Low_complexity 4 55 0 5 1359 505 161 54 0 chr13 101512841 101512934 -18771378 - B1_Mur2 SINE Alu -9 140 43 5 1359 229 306 0 16 chr13 101512968 101513031 -18771281 - B4 SINE B4 0 292 231 5 1359 698 180 50 7 chr13 101513259 101513399 -18770913 - B1_Mur2 SINE Alu 0 149 4 5 1359 315 71 0 0 chr13 101513618 101513660 -18770652 + (A)n Simple_repeat Simple_repeat 1 42 0 5 1359 2481 218 75 42 chr13 101514871 101515498 -18768814 + Lx7 LINE L1 6801 7448 -248 5 1359 522 46 0 0 chr13 101515499 101515564 -18768748 + (TTTC)n Simple_repeat Simple_repeat 2 66 0 5 1359 1229 36 42 0 chr13 101515569 101515735 -18768577 - B2_Mm2 SINE B2 -22 173 1 5 1359 430 205 121 64 chr13 101515824 101515965 -18768347 + B4A SINE B4 144 292 0 5 1359 462 337 0 52 chr13 101515964 101516136 -18768176 + B4A SINE B4 84 246 -46 5 1359 436 204 20 39 chr13 101516137 101516239 -18768073 + B3 SINE B2 1 100 -116 6 1359 622 285 79 37 chr13 101516338 101516553 -18767759 + ID_B1 SINE B4 1 224 0 6 1359 240 248 185 28 chr13 101516554 101516662 -18767650 + RSINE1 SINE B4 1 125 -40 6 1359 504 224 56 0 chr13 101517074 101517199 -18767113 - B3 SINE B2 0 216 85 6 1359 270 0 0 0 chr13 101517201 101517231 -18767081 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1359 617 233 16 0 chr13 101517321 101517450 -18766862 - B1_Mur1 SINE Alu -17 132 2 6 1359 407 265 10 48 chr13 101517501 101517604 -18766708 + PB1D10 SINE Alu 1 99 -18 6 1359 232 309 157 43 chr13 101517604 101517615 -18766697 + B4A SINE B4 86 212 -80 6 1359 231 152 43 0 chr13 101517624 101517670 -18766642 + (CAGGG)n Simple_repeat Simple_repeat 3 50 0 6 1359 887 176 138 11 chr13 101517917 101518106 -18766206 + B3 SINE B2 1 213 -3 6 1359 27 73 0 0 chr13 101518106 101518161 -18766151 + AT_rich Low_complexity Low_complexity 1 55 0 7 1359 440 319 86 43 chr13 101518195 101518405 -18765907 + B4 SINE B4 11 229 -63 7 1359 1018 104 21 4 chr13 101518423 101518671 -18765641 + (TC)n Simple_repeat Simple_repeat 1 252 0 7 1359 1258 56 0 0 chr13 101519007 101519172 -18765140 + B2_Mm2 SINE B2 1 167 -26 7 1359 234 0 0 0 chr13 101519172 101519198 -18765114 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 1359 1171 43 0 0 chr13 101519198 101519336 -18764976 - B1_Mus2 SINE Alu -9 138 1 7 1359 1037 153 16 5 chr13 101519336 101519360 -18764952 + B2_Mm1t SINE B2 168 192 -1 7 1359 318 221 103 66 chr13 101519381 101519517 -18764795 - B1_Mur1 SINE Alu 0 149 9 7 1359 213 235 99 99 chr13 101519386 101519537 -18764775 - ID_B1 SINE B4 -2 222 72 7 1359 919 110 26 0 chr13 101519612 101519766 -18764546 + (TTTCC)n Simple_repeat Simple_repeat 4 161 0 7 1359 420 238 0 0 chr13 101519766 101519871 -18764441 + CT-rich Low_complexity Low_complexity 1 105 0 7 1359 663 182 0 16 chr13 101519871 101519994 -18764318 - ID_B1 SINE B4 0 224 104 8 1359 466 250 86 22 chr13 101519994 101520010 -18764302 - B1F2 SINE Alu 0 149 2 8 1359 360 224 0 38 chr13 101520010 101520086 -18764226 - B1F SINE Alu -17 132 60 8 1359 243 304 98 0 chr13 101520511 101520623 -18763689 + RMER5 LTR ERV1 33 155 -379 8 1359 842 143 0 0 chr13 101520635 101520775 -18763537 - URR1B DNA MER1_type -3 222 83 8 1359 321 254 186 43 chr13 101521009 101521149 -18763163 + RSINE1 SINE B4 4 163 -2 8 1359 500 273 137 11 chr13 101521663 101521941 -18762371 + RMER5 LTR ERV1 153 465 -69 8 1359 338 240 53 0 chr13 101522867 101522942 -18761370 + B1_Mur1 SINE Alu 49 127 -22 8 1359 370 98 0 16 chr13 101522995 101523057 -18761255 - RMER4B LTR ERVK -500 85 25 8 1359 1620 139 69 3 chr13 101523057 101523346 -18760966 + Lx3B LINE L1 6662 6969 -4 8 1359 1243 98 35 6 chr13 101523489 101523663 -18760649 + B2_Mm2 SINE B2 3 181 -14 8 1359 441 237 11 0 chr13 101523704 101523797 -18760515 - RLTR14 LTR ERV1 0 382 289 9 1359 288 70 0 0 chr13 101523804 101523847 -18760465 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 9 1359 1040 85 35 0 chr13 101523871 101524012 -18760300 - B1_Mus1 SINE Alu 0 148 3 9 1359 1388 169 19 39 chr13 101524014 101524321 -18759991 - RLTR14 LTR ERV1 -81 301 1 9 1359 556 273 92 12 chr13 101524321 101524480 -18759832 - B3 SINE B2 -44 172 1 9 1359 914 245 5 20 chr13 101524489 101524693 -18759619 - ID_B1 SINE B4 -1 223 23 9 1359 242 305 0 0 chr13 101524643 101524702 -18759610 - BC1_Mm scRNA scRNA -81 71 13 9 1359 1229 145 91 5 chr13 101524727 101524935 -18759377 - URR1A DNA MER1_type 0 226 1 9 1359 995 83 13 76 chr13 101524964 101525121 -18759191 - B1_Mus1 SINE Alu 0 148 2 9 1359 512 342 65 17 chr13 101525126 101525420 -18758892 - HERV16-int LTR ERVL -3837 1159 852 9 1359 262 241 47 24 chr13 101525674 101525759 -18758553 + RMER5 LTR ERV1 48 134 -400 9 1359 1691 94 102 56 chr13 101525760 101526065 -18758247 + ORR1A3 LTR MaLR 1 319 -7 1 1359 386 254 33 72 chr13 101526058 101526210 -18758102 + RMER5 LTR ERV1 134 279 -255 9 1359 739 232 115 28 chr13 101526210 101526463 -18757849 - ORR1E LTR MaLR -3 356 82 1 1359 629 230 56 28 chr13 101526463 101526642 -18757670 + B3 SINE B2 2 185 -10 1 1359 249 305 158 0 chr13 101526638 101526720 -18757592 - ORR1E LTR MaLR -263 96 2 1 1359 1496 49 43 0 chr13 101526903 101527088 -18757224 - B2_Mm1t SINE B2 0 193 1 1 1359 2204 136 45 0 chr13 101527897 101528229 -18756083 + Lx4A LINE L1 6521 6867 -191 1 1359 438 136 21 74 chr13 101528255 101528350 -18755962 - B1F2 SINE Alu -7 142 53 1 1359 582 267 69 48 chr13 101528430 101528619 -18755693 + B3 SINE B2 1 193 -23 1 1359 418 179 26 0 chr13 101528620 101528698 -18755614 - B1_Mur3 SINE Alu -5 144 65 1 1359 2293 24 0 0 chr13 101528695 101528987 -18755325 + MT-int LTR MaLR 732 1023 -75 1 1359 360 131 16 0 chr13 101528991 101529052 -18755260 - B1_Mur4 SINE Alu -86 64 3 1 1359 21 36 0 0 chr13 101529056 101529084 -18755228 + AT_rich Low_complexity Low_complexity 1 28 0 1 1359 21 0 0 0 chr13 101529329 101529350 -18754962 + AT_rich Low_complexity Low_complexity 1 21 0 1 1359 262 123 17 17 chr13 101529360 101529418 -18754894 + (TATG)n Simple_repeat Simple_repeat 3 60 0 1 1359 947 194 29 39 chr13 101529418 101529622 -18754690 - B3 SINE B2 -13 203 2 1 1359 609 257 26 58 chr13 101530206 101530396 -18753916 - ID_B1 SINE B4 0 224 41 1 1359 1380 84 26 16 chr13 101530577 101530770 -18753542 - B2_Mm2 SINE B2 0 195 1 1 1359 1078 90 0 20 chr13 101530807 101530954 -18753358 + B1_Mus1 SINE Alu 5 148 0 1 1359 201 39 0 0 chr13 101531054 101531080 -18753232 + (T)n Simple_repeat Simple_repeat 1 26 0 1 1359 607 118 9 38 chr13 101531158 101531264 -18753048 + PB1D9 SINE Alu 2 104 -16 1 1359 207 0 0 0 chr13 101531268 101531291 -18753021 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1359 25 0 0 0 chr13 101531336 101531361 -18752951 + AT_rich Low_complexity Low_complexity 1 25 0 1 1359 198 0 0 0 chr13 101531363 101531385 -18752927 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1359 637 261 6 25 chr13 101531412 101531569 -18752743 - B3 SINE B2 -62 154 1 1 1359 409 268 36 0 chr13 101531572 101531684 -18752628 - PB1D10 SINE Alu 0 117 2 1 1359 235 288 0 0 chr13 101531901 101531960 -18752352 + (TATG)n Simple_repeat Simple_repeat 1 59 0 1 1359 1397 81 37 16 chr13 101532172 101532361 -18751951 - B2_Mm2 SINE B2 0 195 3 1 1359 250 191 85 0 chr13 101532363 101532410 -18751902 - PB1D10 SINE Alu -12 105 55 1 1359 834 117 0 23 chr13 101532411 101532542 -18751770 + B2_Mm2 SINE B2 2 129 -66 1 1359 397 290 142 24 chr13 101532574 101532701 -18751611 - ID_B1 SINE B4 -76 148 7 1 1359 646 200 16 8 chr13 101532787 101532913 -18751399 - B1_Mus1 SINE Alu -20 128 2 1 1359 273 187 32 151 chr13 101532803 101532929 -18751383 - MT2B LTR ERVL -337 264 154 1 1359 1178 68 92 0 chr13 101533016 101533179 -18751133 - B2_Mm2 SINE B2 -17 178 1 1 1359 183 80 0 0 chr13 101533425 101533450 -18750862 + (CA)n Simple_repeat Simple_repeat 1 25 0 1 1359 404 263 98 33 chr13 101533778 101533900 -18750412 - ID_B1 SINE B4 -11 213 84 1 1359 626 268 91 25 chr13 101534247 101534446 -18749866 + B3 SINE B2 5 216 0 1 1359 612 263 40 62 chr13 101534460 101534687 -18749625 + ID_B1 SINE B4 1 222 -2 1 1359 1110 69 0 14 chr13 101535066 101535213 -18749099 + B1_Mus2 SINE Alu 1 145 -2 1 1359 461 227 270 0 chr13 101535217 101535380 -18748932 - B3 SINE B2 -9 207 1 1 1359 311 264 46 0 chr13 101535405 101535492 -18748820 + RSINE1 SINE B4 19 109 -56 1 1359 587 186 53 9 chr13 101535541 101535655 -18748657 - PB1D9 SINE Alu 0 120 2 1 1359 252 247 161 0 chr13 101535735 101535816 -18748496 + LTR89 LTR ERVL? 378 471 -408 1 1359 327 287 79 0 chr13 101536211 101536312 -18748000 + RSINE1 SINE B4 50 158 -7 1 1359 192 77 0 0 chr13 101536323 101536349 -18747963 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1 1359 1083 112 0 6 chr13 101536349 101536511 -18747801 - B2_Mm2 SINE B2 -34 161 1 1 1359 781 171 7 14 chr13 101536535 101536677 -18747635 - B1_Mur4 SINE Alu -5 145 5 1 1359 1189 35 0 7 chr13 101536898 101537043 -18747269 + B1_Mm SINE Alu 2 145 -2 1 1359 423 0 0 0 chr13 101537043 101537090 -18747222 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1 1359 1193 75 0 0 chr13 101537102 101537249 -18747063 + B1_Mus2 SINE Alu 1 147 0 1 1359 1294 102 17 0 chr13 101537288 101537465 -18746847 + B2_Mm2 SINE B2 2 181 -14 1 1359 907 49 16 0 chr13 101537473 101537596 -18746716 - B1_Mus2 SINE Alu 0 147 23 1 1359 21 71 0 0 chr13 101537596 101537638 -18746674 + AT_rich Low_complexity Low_complexity 1 42 0 1 1359 263 250 133 9 chr13 101537693 101537798 -18746514 - B3A SINE B2 -2 196 79 1 1359 486 145 24 0 chr13 101538054 101538137 -18746175 - ID_B1 SINE B4 -17 207 123 1 1359 221 308 0 15 chr13 101538271 101538337 -18745975 + PB1 SINE Alu 6 70 -57 1 1359 435 250 0 0 chr13 101538426 101538558 -18745754 + (TG)n Simple_repeat Simple_repeat 1 132 0 1 1359 571 256 6 53 chr13 101538558 101538727 -18745585 - RSINE1 SINE B4 0 165 5 1 1359 3349 39 7 5 chr13 101538799 101539210 -18745102 - L1Md_F2 LINE L1 -4 6578 6167 1 1359 1530 59 5 0 chr13 101539248 101539434 -18744878 + B2_Mm1t SINE B2 1 187 -6 1 1359 291 85 0 0 chr13 101539900 101539947 -18744365 + (CACAA)n Simple_repeat Simple_repeat 4 50 0 1 1359 636 197 0 33 chr13 101540795 101540916 -18743396 - B1_Mur2 SINE Alu -32 117 1 1 1359 372 266 17 8 chr13 101540927 101541038 -18743274 - PB1D10 SINE Alu -9 111 1 1 1359 345 291 58 32 chr13 101541712 101541868 -18742444 - RSINE1 SINE B4 -3 162 3 1 1359 460 290 32 8 chr13 101541945 101542070 -18742242 - B1_Mur1 SINE Alu -18 131 4 1 1359 2117 92 3 0 chr13 101542150 101542455 -18741857 + ORR1A2 LTR MaLR 14 319 -8 1 1359 409 198 215 0 chr13 101542492 101542613 -18741699 + B3 SINE B2 70 216 0 1 1359 600 271 59 18 chr13 101543047 101543216 -18741096 + B3A SINE B2 1 176 -22 1 1359 252 0 0 0 chr13 101543221 101543249 -18741063 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1359 814 182 0 33 chr13 101543269 101543422 -18740890 - B1_Mur4 SINE Alu -2 148 1 1 1359 877 92 23 8 chr13 101543433 101543565 -18740747 - B1_Mus1 SINE Alu -10 138 5 1 1359 252 283 53 70 chr13 101543646 101543760 -18740552 + B1F SINE Alu 38 149 0 1 1359 1147 90 76 43 chr13 101543798 101543949 -18740363 + B2_Mm2 SINE B2 3 145 -50 1 1359 258 32 0 0 chr13 101543949 101543980 -18740332 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1359 1147 90 76 43 chr13 101543980 101544013 -18740299 + B2_Mm2 SINE B2 146 192 -3 1 1359 1144 69 7 0 chr13 101544057 101544201 -18740111 + B1_Mus2 SINE Alu 2 146 -1 1 1359 180 0 0 0 chr13 101544202 101544222 -18740090 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 1 1359 1114 75 14 0 chr13 101544498 101544644 -18739668 - B1_Mus1 SINE Alu 0 148 1 1 1359 930 89 176 13 chr13 101544718 101544877 -18739435 - B2_Mm2 SINE B2 -9 186 2 1 1359 277 298 24 0 chr13 101544921 101545005 -18739307 - MER58B DNA MER1_type -15 326 241 1 1359 227 283 0 0 chr13 101546021 101546074 -18738238 + ID4 SINE ID 6 58 -25 1 1359 626 202 32 16 chr13 101546226 101546352 -18737960 - B3A SINE B2 -70 128 1 1 1359 215 231 58 0 chr13 101546361 101546413 -18737899 - PB1D10 SINE Alu -9 108 54 1 1359 294 269 115 0 chr13 101546659 101546763 -18737549 + B1F SINE Alu 20 135 -14 1 1359 298 140 377 0 chr13 101547020 101547126 -18737186 - B2_Mm2 SINE B2 -3 192 47 1 1359 891 150 50 82 chr13 101547178 101547360 -18736952 - B2_Mm1t SINE B2 -14 179 4 1 1359 483 226 182 36 chr13 101547566 101547818 -18736494 + Lx9 LINE L1 7020 7308 -336 1 1359 247 183 97 32 chr13 101547829 101547891 -18736421 + Lx9 LINE L1 7402 7467 -177 1 1359 1164 49 14 0 chr13 101548078 101548222 -18736090 + B1_Mus2 SINE Alu 2 147 0 1 1359 714 192 31 0 chr13 101548323 101548453 -18735859 + B3 SINE B2 2 135 -81 1 1359 189 171 0 0 chr13 101548465 101548500 -18735812 + A-rich Low_complexity Low_complexity 2 36 0 1 1359 216 304 72 0 chr13 101549874 101549943 -18734369 - PB1D9 SINE Alu -26 94 21 1 1359 1366 68 6 28 chr13 101550144 101550326 -18733986 - B2_Mm1t SINE B2 -14 179 2 1 1359 243 319 0 65 chr13 101551433 101551510 -18732802 + ID4_ SINE ID 3 74 -9 1 1359 1098 73 152 0 chr13 101552176 101552341 -18731971 + B2_Mm2 SINE B2 2 191 -4 1 1359 737 181 7 0 chr13 101552449 101552587 -18731725 - B1_Mus2 SINE Alu 0 147 9 1 1359 364 239 0 0 chr13 101552729 101552796 -18731516 + ID4 SINE ID 9 75 -8 1 1359 376 281 107 39 chr13 101553771 101553949 -18730363 + B3A SINE B2 3 192 -6 1 1359 494 202 202 0 chr13 101553982 101554106 -18730206 + B1_Mur2 SINE Alu 1 149 0 1 1359 449 194 86 0 chr13 101554161 101554254 -18730058 + RSINE1 SINE B4 25 125 -40 1 1359 433 275 67 11 chr13 101554295 101554475 -18729837 + B3A SINE B2 1 190 -8 1 1359 306 275 36 48 chr13 101554619 101554703 -18729609 - PB1D10 SINE Alu -32 85 3 1 1359 282 250 176 37 chr13 101554892 101555000 -18729312 - B1_Mur1 SINE Alu 0 149 27 1 1359 229 145 0 113 chr13 101555163 101555225 -18729087 + B1_Mur1 SINE Alu 95 149 0 1 1359 1231 54 0 0 chr13 101557010 101557158 -18727154 - B1_Mus1 SINE Alu 0 148 1 2 1359 740 256 34 27 chr13 101557447 101557887 -18726425 + RMER17C LTR ERVK 1 381 -29 2 1359 273 297 43 11 chr13 101557898 101557990 -18726322 - ID_B1 SINE B4 -25 199 105 2 1359 189 0 0 0 chr13 101557998 101558019 -18726293 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1359 1287 14 0 0 chr13 101558019 101558166 -18726146 - B1_Mus2 SINE Alu 0 147 1 2 1359 252 269 29 15 chr13 101558202 101558270 -18726042 - ID4_ SINE ID -13 70 2 2 1359 1061 95 124 43 chr13 101558411 101558621 -18725691 + RMER15 LTR ERVL 317 543 -32 2 1359 288 312 0 0 chr13 101558648 101558725 -18725587 + Lx8 LINE L1 7074 7150 -323 2 1359 203 125 0 24 chr13 101558873 101558914 -18725398 + (GAAAA)n Simple_repeat Simple_repeat 3 42 0 2 1359 2620 121 42 31 chr13 101558951 101559376 -18724936 - RLTR23 LTR ERV1 0 430 1 2 1359 1215 35 0 14 chr13 101559446 101559593 -18724719 - B1_Mus1 SINE Alu -2 146 2 2 1359 1323 73 0 0 chr13 101559762 101559997 -18724315 + (CCA)n Simple_repeat Simple_repeat 1 235 0 2 1359 271 250 0 42 chr13 101559999 101560070 -18724242 - Lx8 LINE L1 -236 7237 7170 2 1359 293 209 0 43 chr13 101560083 101560153 -18724159 - RSINE1 SINE B4 -97 68 2 2 1359 363 207 43 45 chr13 101560153 101560258 -18724054 - B1F2 SINE Alu -21 128 26 2 1359 623 236 132 98 chr13 101560426 101560713 -18723599 + RMER10A LTR ERVL 2 298 -144 2 1359 381 247 29 106 chr13 101560703 101560796 -18723516 + RMER10B LTR ERVL 196 284 -114 2 1359 417 20 0 0 chr13 101560796 101560846 -18723466 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1359 381 247 29 106 chr13 101560846 101560960 -18723352 + RMER10B LTR ERVL 285 387 -11 2 1359 516 258 97 0 chr13 101561207 101561331 -18722981 + B1_Mur1 SINE Alu 1 136 -13 2 1359 498 33 0 0 chr13 101561333 101561393 -18722919 + (GAAA)n Simple_repeat Simple_repeat 1 60 0 2 1359 1029 44 0 0 chr13 101561394 101561530 -18722782 + B1_Mus1 SINE Alu 13 148 0 2 1359 416 268 141 0 chr13 101561550 101561692 -18722620 - Lx8 LINE L1 -292 7181 7020 2 1359 464 196 0 30 chr13 101561821 101561921 -18722391 - B1F2 SINE Alu -7 142 46 2 1359 3509 114 25 28 chr13 101561902 101562541 -18721771 - RMER6A LTR ERVK -119 637 1 2 1359 562 227 42 21 chr13 101562681 101562825 -18721487 - B1_Mur2 SINE Alu -2 147 1 2 1359 12702 144 43 14 chr13 101562957 101563368 -18720944 - MERVL_2A-int LTR ERVL -1194 4567 4117 2 1359 1300 85 36 21 chr13 101563368 101563560 -18720752 - B2_Mm2 SINE B2 0 195 1 2 1359 12702 144 43 14 chr13 101563560 101564870 -18719442 - MERVL_2A-int LTR ERVL -1645 4116 2774 2 1359 1261 96 5 56 chr13 101564870 101565068 -18719244 + B2_Mm1a SINE B2 2 189 -4 2 1359 12702 144 43 14 chr13 101565068 101565213 -18719099 - MERVL_2A-int LTR ERVL -2988 2773 2640 2 1359 3188 48 10 5 chr13 101565213 101565611 -18718701 + MTB LTR MaLR 1 400 0 2 1359 12702 144 43 14 chr13 101565611 101565791 -18718521 - MERVL_2A-int LTR ERVL -3122 2639 2460 2 1359 642 112 0 56 chr13 101565799 101565959 -18718353 + CT-rich Low_complexity Low_complexity 3 153 0 2 1359 471 65 0 0 chr13 101565960 101566022 -18718290 - B1_Mus1 SINE Alu -55 93 32 2 1359 448 151 0 14 chr13 101566022 101566096 -18718216 - MERVL_2A-int LTR ERVL -3331 2430 2358 2 1359 420 72 29 14 chr13 101566113 101566183 -18718129 - L1Md_F2 LINE L1 -10 6572 6502 2 1359 180 0 0 0 chr13 101566210 101566230 -18718082 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2 1359 1254 44 0 0 chr13 101566230 101566389 -18717923 - B2_Mm1t SINE B2 -34 159 1 2 1359 561 84 0 0 chr13 101566389 101566460 -18717852 - MERVL_2A-int LTR ERVL -3379 2382 2312 2 1359 872 189 103 0 chr13 101566460 101566645 -18717667 - MTC LTR MaLR -35 386 183 2 1359 3227 188 82 8 chr13 101568609 101569259 -18715053 - MERVL_2A-int LTR ERVL -5013 748 51 2 1359 794 194 72 199 chr13 101569450 101569811 -18714501 - MT2B LTR ERVL -112 489 175 2 1359 627 154 8 93 chr13 101569818 101569947 -18714365 + B1_Mur4 SINE Alu 12 129 -21 2 1359 30 0 0 0 chr13 101570234 101570264 -18714048 + AT_rich Low_complexity Low_complexity 1 30 0 2 1359 626 101 9 75 chr13 101570307 101570414 -18713898 + B1_Mur4 SINE Alu 46 145 -5 2 1359 461 282 115 6 chr13 101570427 101570584 -18713728 - B3 SINE B2 -6 210 37 2 1359 3575 136 62 9 chr13 101570590 101571250 -18713062 + RLTR19B LTR ERVK 1 695 -20 2 1359 1641 42 0 0 chr13 101571663 101571856 -18712456 - B2_Mm1a SINE B2 0 193 1 2 1359 1181 42 14 0 chr13 101571878 101572022 -18712290 - B1_Mm SINE Alu -1 146 1 2 1359 24 0 0 0 chr13 101572606 101572630 -18711682 + AT_rich Low_complexity Low_complexity 1 24 0 2 1359 270 304 70 28 chr13 101573469 101573509 -18710803 - B1_Mur2 SINE Alu 0 149 105 2 1359 1239 34 7 0 chr13 101573509 101573655 -18710657 + B1_Mus1 SINE Alu 2 148 0 2 1359 270 304 70 28 chr13 101573655 101573756 -18710556 - B1_Mur2 SINE Alu -45 104 3 2 1359 998 184 24 14 chr13 101574360 101574569 -18709743 - B3 SINE B2 0 216 6 2 1359 712 249 25 75 chr13 101574686 101574886 -18709426 - B3 SINE B2 0 216 27 2 1359 1146 23 0 0 chr13 101575301 101575433 -18708879 + B1_Mus2 SINE Alu 1 132 -15 2 1359 418 155 165 0 chr13 101575540 101575637 -18708675 - B3 SINE B2 -103 113 1 2 1359 381 323 63 40 chr13 101575717 101575891 -18708421 - B4 SINE B4 -114 178 1 2 1359 314 278 83 9 chr13 101575894 101575918 -18708394 - PB1D10 SINE Alu 0 117 5 2 1359 322 250 49 12 chr13 101575918 101575999 -18708313 - ID_B1 SINE B4 -55 169 86 2 1359 28 48 0 0 chr13 101576366 101576408 -18707904 + AT_rich Low_complexity Low_complexity 1 42 0 2 1359 30 27 0 0 chr13 101577008 101577045 -18707267 + AT_rich Low_complexity Low_complexity 1 37 0 2 1359 547 196 10 12 chr13 101577045 101577161 -18707151 + PB1D9 SINE Alu 6 117 -3 2 1359 1088 109 0 0 chr13 101577323 101577470 -18706842 - B1_Mus2 SINE Alu 0 147 1 2 1359 250 228 12 60 chr13 101578496 101578580 -18705732 + RMER4A LTR ERVK 25 104 -362 2 1359 480 194 36 50 chr13 101578696 101578867 -18705445 - B3 SINE B2 -4 191 25 2 1359 653 119 99 0 chr13 101579495 101579596 -18704716 + PB1D9 SINE Alu 2 112 -8 2 1359 1096 168 30 10 chr13 101579708 101579906 -18704406 + B3 SINE B2 2 203 -13 2 1359 186 43 0 0 chr13 101580400 101580423 -18703889 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2 1359 1125 62 14 0 chr13 101580428 101580572 -18703740 - B1_Mus2 SINE Alu 0 147 2 2 169 358 311 99 10 chr13 101580614 101580806 -18703506 - Tigger7 DNA MER2_type -2 2489 2281 2 1360 1168 68 0 26 chr13 101580884 101581035 -18703277 + B1_Mus2 SINE Alu 1 147 0 2 1360 237 281 110 0 chr13 101581052 101581134 -18703178 - Tigger7 DNA MER2_type -2392 99 9 2 1360 21 36 0 0 chr13 101581426 101581454 -18702858 + AT_rich Low_complexity Low_complexity 1 28 0 2 1360 27 92 0 0 chr13 101581504 101581580 -18702732 + AT_rich Low_complexity Low_complexity 1 76 0 2 1360 340 171 169 12 chr13 101581807 101581857 -18702455 + B3 SINE B2 116 165 -51 2 1360 549 80 0 0 chr13 101581857 101581932 -18702380 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1360 340 171 169 12 chr13 101581932 101581964 -18702348 + B3 SINE B2 166 211 -5 2 1360 1636 47 0 0 chr13 101582380 101582572 -18701740 + B2_Mm1a SINE B2 2 193 0 2 1360 568 169 150 24 chr13 101584344 101584471 -18699841 + B1_Mur4 SINE Alu 1 143 -7 2 1360 466 206 30 5 chr13 101584806 101584911 -18699401 - B1_Mur1 SINE Alu -8 141 39 2 1360 332 215 0 15 chr13 101584915 101584981 -18699331 - ID4_ SINE ID -15 68 4 2 1360 473 253 154 13 chr13 101585015 101585171 -18699141 - B3A SINE B2 -18 180 3 2 1360 1139 82 7 0 chr13 101585441 101585587 -18698725 + B1_Mus2 SINE Alu 1 147 0 2 1360 989 140 140 0 chr13 101585604 101585782 -18698530 - B3 SINE B2 -12 204 2 2 1360 310 200 122 0 chr13 101585806 101585896 -18698416 - PB1D9 SINE Alu -7 113 13 2 1360 241 253 200 0 chr13 101585945 101586020 -18698292 + ID_B1 SINE B4 123 212 -12 2 1360 5381 98 8 19 chr13 101586013 101586896 -18697416 - RLTR13A3 LTR ERVK -19 959 1 2 1360 24 32 0 0 chr13 101587194 101587225 -18697087 + AT_rich Low_complexity Low_complexity 1 31 0 2 1360 383 204 172 10 chr13 101588262 101588361 -18695951 - PB1D10 SINE Alu -2 115 1 2 1360 217 0 24 95 chr13 101588374 101588416 -18695896 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 2 1360 497 263 98 0 chr13 101588880 101589013 -18695299 - B3A SINE B2 -5 193 48 2 1360 656 262 37 21 chr13 101589010 101589252 -18695060 - B4A SINE B4 -46 246 1 2 1360 2127 192 40 29 chr13 101589746 101590272 -18694040 + RLTR20B2 LTR ERVK 29 560 0 2 1360 22 35 0 0 chr13 101590486 101590515 -18693797 + AT_rich Low_complexity Low_complexity 1 29 0 2 1360 1456 65 11 0 chr13 101590764 101590950 -18693362 - B2_Mm1t SINE B2 -4 189 2 2 1360 22 0 0 0 chr13 101591368 101591390 -18692922 + AT_rich Low_complexity Low_complexity 1 22 0 2 1360 270 0 0 0 chr13 101591640 101591670 -18692642 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1360 230 266 0 59 chr13 101591678 101591699 -18692613 - B4A SINE B4 -142 150 87 2 1360 333 128 0 0 chr13 101591699 101591746 -18692566 - B1_Mus1 SINE Alu -100 48 2 2 1360 701 263 84 4 chr13 101591758 101591983 -18692329 - B4A SINE B4 -48 244 2 2 1360 581 215 207 11 chr13 101592030 101592209 -18692103 + B3 SINE B2 1 214 -2 2 1360 445 293 16 24 chr13 101592242 101592368 -18691944 - PB1 SINE Alu -2 125 1 2 1360 222 192 19 0 chr13 101592420 101592472 -18691840 - B1_Mus2 SINE Alu -6 141 89 2 1360 1203 48 0 0 chr13 101592517 101592663 -18691649 - B1_Mus1 SINE Alu 0 148 3 2 1360 600 257 20 60 chr13 101592695 101592894 -18691418 + B3A SINE B2 2 192 -6 2 1360 284 325 0 0 chr13 101592896 101592973 -18691339 + B2_Mm2 SINE B2 1 77 -118 2 1360 299 208 91 0 chr13 101592980 101593057 -18691255 + B3 SINE B2 106 189 -27 2 1360 309 219 14 14 chr13 101593123 101593197 -18691115 + B1F1 SINE Alu 75 148 -1 2 1360 1119 128 78 0 chr13 101593574 101593753 -18690559 + B2_Mm2 SINE B2 2 194 -1 2 1360 552 182 129 0 chr13 101594215 101594347 -18689965 + B1_Mur3 SINE Alu 1 149 0 3 1360 433 239 35 28 chr13 101595042 101595184 -18689128 + B1_Mur1 SINE Alu 7 149 0 3 1360 496 192 115 0 chr13 101595312 101595416 -18688896 - PB1D9 SINE Alu -4 116 1 3 1360 289 320 28 37 chr13 101595525 101595632 -18688680 - PB1D7 SINE Alu -7 113 8 3 1360 273 179 8 145 chr13 101595840 101595964 -18688348 - MIR SINE MIR -55 207 101 3 1360 243 349 65 0 chr13 101596062 101596231 -18688081 + ID_B1 SINE B4 32 211 -13 3 1360 180 111 0 0 chr13 101596231 101596258 -18688054 + (CAGAC)n Simple_repeat Simple_repeat 1 27 0 3 1360 766 204 61 33 chr13 101596558 101596771 -18687541 - RCHARR1 DNA MER1_type 0 974 756 3 1360 505 191 59 0 chr13 101596780 101596916 -18687396 - RCHARR1 DNA MER1_type -525 449 306 3 1360 680 203 35 0 chr13 101596924 101597067 -18687245 + B1_Mur1 SINE Alu 2 149 0 3 1360 263 270 93 13 chr13 101597194 101597269 -18687043 - PB1D10 SINE Alu -29 88 8 3 1360 249 278 97 0 chr13 101597207 101597279 -18687033 - ID_B1 SINE B4 -67 157 79 3 1360 960 67 96 0 chr13 101597635 101597770 -18686542 + B1_Mus1 SINE Alu 1 148 0 3 1360 387 60 0 0 chr13 101597770 101597820 -18686492 + (GAAA)n Simple_repeat Simple_repeat 3 52 0 3 1360 750 231 53 11 chr13 101597931 101598119 -18686193 - B3A SINE B2 0 198 3 3 1360 276 309 54 43 chr13 101598120 101598306 -18686006 + Charlie1b DNA MER1_type 69 256 -267 3 1360 383 260 56 37 chr13 101598377 101598485 -18685827 - PB1D10 SINE Alu -7 110 1 3 1360 1145 75 7 0 chr13 101598652 101598798 -18685514 + B1_Mus2 SINE Alu 1 147 0 3 1360 243 0 0 0 chr13 101598800 101598827 -18685485 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1360 309 200 18 0 chr13 101599207 101599262 -18685050 + PB1 SINE Alu 6 61 -66 3 1360 287 290 0 0 chr13 101599463 101599525 -18684787 - PB1D10 SINE Alu -7 110 49 3 1360 22 35 0 0 chr13 101599533 101599562 -18684750 + AT_rich Low_complexity Low_complexity 1 29 0 3 1360 188 182 23 0 chr13 101599939 101599983 -18684329 + (TTTAG)n Simple_repeat Simple_repeat 1 45 0 3 1360 502 287 65 20 chr13 101600462 101600615 -18683697 - RSINE1 SINE B4 -4 161 2 3 1360 522 159 84 0 chr13 101600646 101600753 -18683559 - PB1D9 SINE Alu 0 120 5 3 1360 344 270 295 21 chr13 101601565 101601758 -18682554 + MIR SINE MIR 9 254 -8 3 1360 236 275 179 12 chr13 101602042 101602215 -18682097 - L1MC4 LINE L1 -150 7892 7691 3 1360 23 33 0 0 chr13 101603088 101603118 -18681194 + GC_rich Low_complexity Low_complexity 1 30 0 3 1360 332 214 29 0 chr13 101603663 101603733 -18680579 - B1F SINE Alu -5 144 73 3 1360 237 33 0 0 chr13 101603801 101603831 -18680481 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1360 566 177 152 8 chr13 101604205 101604330 -18679982 + B1_Mur1 SINE Alu 7 149 0 3 1360 563 258 8 0 chr13 101604409 101604529 -18679783 - ID_B1 SINE B4 -12 212 92 3 1360 630 131 0 0 chr13 101604925 101605047 -18679265 + (GAA)n Simple_repeat Simple_repeat 2 123 0 3 1360 241 291 0 0 chr13 101605135 101605190 -18679122 + polypurine Low_complexity Low_complexity 2 56 0 3 1360 342 0 0 0 chr13 101605357 101605395 -18678917 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1360 1190 238 38 68 chr13 101605431 101605796 -18678516 - ORR1D2 LTR MaLR 0 370 17 3 1360 546 298 18 72 chr13 101605801 101606022 -18678290 - B3 SINE B2 -6 210 2 3 1360 21 36 0 0 chr13 101606156 101606184 -18678128 + AT_rich Low_complexity Low_complexity 1 28 0 3 1360 560 232 144 28 chr13 101606231 101606559 -18677753 + MTD LTR MaLR 25 398 -21 3 1360 481 289 59 7 chr13 101606575 101606711 -18677601 - B3A SINE B2 -21 177 35 3 1360 336 287 0 27 chr13 101606733 101606844 -18677468 - B1F1 SINE Alu -2 147 40 3 1360 296 162 14 81 chr13 101607316 101607390 -18676922 - PB1D10 SINE Alu -5 112 44 3 1360 280 200 0 0 chr13 101607482 101607537 -18676775 - B4 SINE B4 -12 280 226 3 1360 258 279 116 0 chr13 101608027 101608113 -18676199 - PB1D10 SINE Alu -1 116 21 3 1360 1235 83 0 16 chr13 101608128 101608311 -18676001 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 3 1360 333 118 0 0 chr13 101608321 101608372 -18675940 + (TCCCC)n Simple_repeat Simple_repeat 5 55 0 3 1360 617 59 29 19 chr13 101608372 101608476 -18675836 + (TTTC)n Simple_repeat Simple_repeat 4 108 0 3 1360 542 180 88 24 chr13 101608595 101608720 -18675592 - B1F SINE Alu -15 134 2 3 1360 450 53 0 0 chr13 101609219 101609276 -18675036 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 3 1360 1283 25 0 12 chr13 101609280 101609445 -18674867 - B2_Mm2 SINE B2 -29 166 4 3 1360 286 273 26 0 chr13 101609468 101609545 -18674767 + MER57-int LTR ERV1 7159 7237 -300 3 1360 500 233 5 5 chr13 101609561 101609701 -18674611 - B1_Mus2 SINE Alu -9 140 1 3 1360 610 263 149 15 chr13 101609701 101609888 -18674424 - B4A SINE B4 -78 214 1 3 1360 371 257 112 26 chr13 101609976 101610092 -18674220 - RSINE1 SINE B4 -37 128 3 3 1360 876 176 162 8 chr13 101610280 101610515 -18673797 - Lx9 LINE L1 -4 7640 7370 3 1360 686 267 60 18 chr13 101610508 101610778 -18673534 - Lx9 LINE L1 -247 7226 6929 3 1360 1059 81 142 6 chr13 101611104 101611266 -18673046 + B2_Mm2 SINE B2 2 185 -10 3 1360 1271 114 0 6 chr13 101611368 101611545 -18672767 - B2_Mm2 SINE B2 -18 177 2 3 1360 2678 207 16 65 chr13 101611729 101612371 -18671941 + RMER19C LTR ERVK 1 610 -1 3 1360 191 61 0 29 chr13 101612544 101612578 -18671734 + (TTAA)n Simple_repeat Simple_repeat 1 33 0 3 1360 903 222 20 25 chr13 101612580 101612783 -18671529 - B3 SINE B2 -14 202 1 3 1360 282 221 130 37 chr13 101613103 101613211 -18671101 + PB1D9 SINE Alu 1 118 -2 3 1360 378 0 0 0 chr13 101613331 101613373 -18670939 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1360 262 250 28 0 chr13 101613373 101613445 -18670867 - ID4_ SINE ID -7 76 3 3 1360 540 251 45 94 chr13 101613487 101613711 -18670601 - MLT1A0 LTR MaLR 0 365 153 3 1360 654 156 98 8 chr13 101613904 101614027 -18670285 - B1_Mur1 SINE Alu -9 140 7 3 1360 401 238 40 16 chr13 101614047 101614171 -18670141 - B3A SINE B2 -13 185 59 3 1360 642 263 143 57 chr13 101614182 101614517 -18669795 - L1M5 LINE L1 -675 5769 5406 3 1360 487 50 75 0 chr13 101614585 101614665 -18669647 - L1Md_F3 LINE L1 -1 6583 6498 3 1360 423 234 0 0 chr13 101614843 101615014 -18669298 + CT-rich Low_complexity Low_complexity 2 172 0 3 1360 420 82 0 0 chr13 101615077 101615138 -18669174 + (TCTG)n Simple_repeat Simple_repeat 4 64 0 3 1360 421 262 68 0 chr13 101615164 101615267 -18669045 - PB1D10 SINE Alu -7 110 1 3 1360 2055 146 88 0 chr13 101615652 101616036 -18668276 + MTC LTR MaLR 1 418 -3 3 1360 220 150 26 138 chr13 101616109 101616225 -18668087 + A-rich Low_complexity Low_complexity 5 107 0 3 1360 722 149 13 54 chr13 101616607 101616756 -18667556 + URR1B DNA MER1_type 81 223 -2 3 1360 349 336 7 46 chr13 101616762 101616915 -18667397 - MLT1A0 LTR MaLR -222 152 6 3 1360 367 274 88 8 chr13 101616911 101617036 -18667276 + ID_B1 SINE B4 79 213 -11 3 1360 572 239 61 87 chr13 101617586 101617815 -18666497 + ID_B1 SINE B4 2 224 0 3 1360 240 35 0 0 chr13 101617962 101617991 -18666321 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1360 1190 49 0 0 chr13 101617991 101618134 -18666178 - B1_Mus2 SINE Alu 0 147 5 3 1360 404 207 138 0 chr13 101618170 101618257 -18666055 - B1_Mur1 SINE Alu -9 140 42 3 1360 346 304 101 31 chr13 101618296 101618425 -18665887 - ID_B1 SINE B4 -6 218 81 3 1360 2135 141 34 81 chr13 101618938 101619347 -18664965 - ORR1B1 LTR MaLR 0 394 5 3 1360 348 264 127 8 chr13 101619866 101619992 -18664320 + MER5A DNA MER1_type 49 189 0 3 1360 343 254 225 32 chr13 101620661 101620848 -18663464 + MLT1A LTR MaLR 1 223 -151 3 1360 574 164 31 94 chr13 101621293 101621421 -18662891 - PB1D9 SINE Alu 0 120 1 3 1360 1540 57 0 15 chr13 101621422 101621618 -18662694 - B2_Mm1t SINE B2 0 193 1 3 1360 482 238 249 6 chr13 101621654 101621819 -18662493 - B3 SINE B2 -11 205 1 3 1360 414 0 0 0 chr13 101621880 101621926 -18662386 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1360 517 318 8 0 chr13 101621938 101622070 -18662242 - ID_B1 SINE B4 -8 216 84 3 1360 235 275 55 0 chr13 101622609 101622700 -18661612 + ID_B1 SINE B4 75 170 -54 3 1360 355 209 42 0 chr13 101622628 101622724 -18661588 + PB1D10 SINE Alu 17 113 -4 3 1360 282 116 0 0 chr13 101622724 101622767 -18661545 + (CAGC)n Simple_repeat Simple_repeat 4 46 0 3 1360 216 0 0 0 chr13 101622833 101622857 -18661455 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1360 929 143 51 17 chr13 101623202 101623380 -18660932 - B2_Mm2 SINE B2 -9 186 3 3 1360 234 182 55 0 chr13 101623392 101623447 -18660865 - Lx8 LINE L1 0 7473 7416 3 1360 828 141 117 0 chr13 101623718 101623881 -18660431 + URR1A DNA MER1_type 45 226 0 3 1360 306 243 168 19 chr13 101623744 101623899 -18660413 - CYRA11_Mm Unknown Y-chromosome -294 323 146 3 1360 248 53 26 0 chr13 101624541 101624579 -18659733 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1360 1007 229 86 8 chr13 101624590 101624858 -18659454 - B4 SINE B4 0 292 4 3 1360 315 289 122 23 chr13 101624876 101625007 -18659305 - B1_Mur2 SINE Alu -5 144 1 3 1360 9231 34 0 0 chr13 101625030 101626788 -18657524 - L1Md_T LINE L1 0 6582 4850 3 1360 248 254 0 0 chr13 101626886 101626941 -18657371 - Tigger7 DNA MER2_type -31 2460 2406 3 1360 192 273 0 0 chr13 101626950 101627016 -18657296 + (TA)n Simple_repeat Simple_repeat 2 67 0 4 1360 1712 129 168 85 chr13 101627076 101627440 -18656872 - ORR1B1 LTR MaLR 0 394 1 4 1360 1002 273 21 11 chr13 101627455 101627740 -18656572 - B4A SINE B4 0 292 5 4 1360 398 243 190 29 chr13 101627760 101627934 -18656378 - Tigger7 DNA MER2_type -1902 589 388 3 1360 2143 184 40 62 chr13 101628312 101628858 -18655454 - RLTR20C LTR ERVK 0 534 1 4 1360 565 335 78 26 chr13 101628858 101629104 -18655208 - Tigger7 DNA MER2_type -2226 265 6 3 1360 1225 200 0 37 chr13 101629993 101630211 -18654101 + B3 SINE B2 2 211 -5 4 1360 352 234 44 18 chr13 101630361 101630474 -18653838 - PB1D10 SINE Alu -1 116 1 4 1360 2481 173 40 50 chr13 101630926 101631509 -18652803 - RLTR20B3 LTR ERVK 0 577 1 4 1360 926 130 7 14 chr13 101631550 101631698 -18652614 + B1_Mus2 SINE Alu 1 147 0 4 1360 186 143 0 0 chr13 101631711 101631746 -18652566 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 4 1360 1699 177 76 5 chr13 101632491 101632860 -18651452 - MTD LTR MaLR -3 416 22 4 1360 182 108 54 0 chr13 101632863 101632900 -18651412 + A-rich Low_complexity Low_complexity 3 41 0 4 1360 366 23 0 0 chr13 101632957 101633000 -18651312 + (TG)n Simple_repeat Simple_repeat 2 44 0 4 1360 273 304 120 0 chr13 101633006 101633098 -18651214 - RSINE1 SINE B4 -60 105 3 4 1360 228 79 0 0 chr13 101633131 101633169 -18651143 + L1M LINE L1 5261 5298 -875 4 1360 505 333 28 28 chr13 101633333 101633580 -18650732 + L1M5 LINE L1 5540 5786 -454 4 1360 3386 26 23 0 chr13 101633686 101634073 -18650239 - MTA_Mm LTR MaLR 0 396 1 4 1360 987 198 55 0 chr13 101634230 101634432 -18649880 - B3 SINE B2 -3 213 1 4 1360 198 0 0 0 chr13 101634447 101634469 -18649843 + (TTA)n Simple_repeat Simple_repeat 3 24 0 4 1360 589 174 115 8 chr13 101634469 101634591 -18649721 - B1_Mur1 SINE Alu -13 136 2 4 1360 1712 26 0 0 chr13 101634633 101634825 -18649487 + B2_Mm1a SINE B2 2 193 0 4 1360 674 244 28 32 chr13 101635249 101635266 -18649046 - B3 SINE B2 0 216 200 4 1360 225 0 0 0 chr13 101635266 101635291 -18649021 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1360 674 244 28 32 chr13 101635291 101635489 -18648823 - B3 SINE B2 -17 199 2 4 1360 501 17 0 0 chr13 101635563 101635621 -18648691 + (TG)n Simple_repeat Simple_repeat 1 58 0 4 1360 306 310 53 75 chr13 101635670 101635906 -18648406 - B4 SINE B4 -3 289 72 4 1360 200 394 16 8 chr13 101637014 101637142 -18647170 - MIR SINE MIR -62 146 18 4 1360 207 69 0 0 chr13 101637399 101637428 -18646884 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 4 1360 305 240 100 55 chr13 101638490 101638600 -18645712 + Charlie4a DNA MER1_type 378 492 -16 4 1360 378 0 0 0 chr13 101638767 101638809 -18645503 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1360 213 120 38 57 chr13 101639084 101639137 -18645175 + CT-rich Low_complexity Low_complexity 2 53 0 4 1360 186 43 0 0 chr13 101639159 101639182 -18645130 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 4 1360 802 191 7 39 chr13 101639184 101639337 -18644975 - B1_Mur2 SINE Alu 0 149 2 4 1360 741 287 29 34 chr13 101639365 101639574 -18644738 - B4A SINE B4 -73 219 12 4 1360 1007 223 14 5 chr13 101639604 101639811 -18644501 + B3 SINE B2 2 210 -6 4 1360 909 205 20 15 chr13 101639840 101640043 -18644269 - B3 SINE B2 0 216 13 4 1360 818 248 95 7 chr13 101640279 101640507 -18643805 - B4 SINE B4 -46 246 2 4 1360 2370 140 68 5 chr13 101640568 101640962 -18643350 + MTC LTR MaLR 1 419 -2 4 1360 506 16 16 0 chr13 101642112 101642175 -18642137 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1360 420 231 83 9 chr13 101642176 101642285 -18642027 - ID_B1 SINE B4 -28 196 80 4 1360 192 40 0 0 chr13 101642288 101642313 -18641999 + (TCTA)n Simple_repeat Simple_repeat 4 28 0 4 1360 432 229 36 45 chr13 101642313 101642423 -18641889 - PB1D10 SINE Alu -8 109 1 4 1360 225 94 0 0 chr13 101642459 101642491 -18641821 + (CCCCCT)n Simple_repeat Simple_repeat 6 37 0 4 1360 458 272 22 7 chr13 101642559 101642696 -18641616 - B1F SINE Alu -1 148 10 4 1360 701 238 62 34 chr13 101643924 101644133 -18640179 - B3 SINE B2 0 216 2 4 1360 684 125 0 0 chr13 101644162 101644290 -18640022 + (GA)n Simple_repeat Simple_repeat 1 128 0 4 1360 764 188 8 0 chr13 101646567 101646695 -18637617 - B1_Mur2 SINE Alu -19 130 2 4 1360 243 0 0 0 chr13 101647081 101647108 -18637204 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1360 896 59 143 0 chr13 101647108 101647227 -18637085 - B1_Mus1 SINE Alu -10 138 3 4 1360 619 193 8 40 chr13 101647229 101647353 -18636959 - RLTR17 LTR ERVK -371 321 202 4 1360 466 292 0 14 chr13 101647359 101647498 -18636814 + L1MB7 LINE L1 6039 6175 -9 4 1360 650 299 54 31 chr13 101647641 101647900 -18636412 - B4A SINE B4 -1 291 27 4 1360 446 137 0 10 chr13 101648004 101648100 -18636212 + (TATG)n Simple_repeat Simple_repeat 2 96 0 4 1360 582 278 0 41 chr13 101648129 101648298 -18636014 - RSINE1 SINE B4 0 165 4 4 1360 1062 214 125 60 chr13 101648619 101648769 -18635543 - MTEb LTR MaLR -2 377 202 4 1360 414 0 0 0 chr13 101648769 101648815 -18635497 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 1360 1062 214 125 60 chr13 101648815 101649016 -18635296 - MTEb LTR MaLR -178 201 3 4 1360 931 288 60 106 chr13 101649664 101650145 -18634167 + MLT1C LTR MaLR 3 461 -6 4 1360 345 19 56 0 chr13 101650197 101650251 -18634061 + (TCCC)n Simple_repeat Simple_repeat 3 59 0 4 1360 674 160 0 39 chr13 101650253 101650383 -18633929 - B1_Mus1 SINE Alu -21 127 3 4 1360 180 307 67 0 chr13 101650406 101650481 -18633831 - MIRb SINE MIR -72 196 117 4 1360 870 333 81 54 chr13 101650735 101651256 -18633056 - MLT1G3 LTR MaLR -57 538 4 4 1360 30 83 0 0 chr13 101651466 101651538 -18632774 + AT_rich Low_complexity Low_complexity 1 72 0 4 1360 798 139 66 0 chr13 101651643 101651780 -18632532 + B1_Mus1 SINE Alu 2 147 -1 4 1360 231 114 0 0 chr13 101651795 101651830 -18632482 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 4 1360 219 69 0 0 chr13 101651870 101651899 -18632413 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 4 1360 274 325 13 0 chr13 101651947 101652024 -18632288 - RSINE1 SINE B4 -86 79 2 4 1360 318 50 0 0 chr13 101652059 101652099 -18632213 + (TC)n Simple_repeat Simple_repeat 2 41 0 4 1360 361 339 18 0 chr13 101652109 101652221 -18632091 - B1F SINE Alu -6 143 30 4 1360 289 276 23 11 chr13 101652283 101652371 -18631941 + MIRb SINE MIR 180 268 0 4 1360 240 35 0 0 chr13 101652475 101652504 -18631808 + (CCAA)n Simple_repeat Simple_repeat 2 30 0 4 1360 588 29 0 0 chr13 101652509 101652579 -18631733 + (CAAG)n Simple_repeat Simple_repeat 1 70 0 4 1360 715 240 63 23 chr13 101652593 101652768 -18631544 + B3A SINE B2 1 182 -16 4 1360 506 262 138 27 chr13 101652874 101653062 -18631250 + B3 SINE B2 1 209 -7 4 1360 305 262 25 0 chr13 101653633 101653713 -18630599 + ID4_ SINE ID 2 83 0 4 1360 218 269 30 0 chr13 101654060 101654127 -18630185 - ID4_ SINE ID -14 69 1 4 1360 21 0 0 0 chr13 101654958 101654979 -18629333 + AT_rich Low_complexity Low_complexity 1 21 0 4 1360 235 273 0 18 chr13 101656071 101656127 -18628185 + MIRb SINE MIR 38 92 -176 4 1360 1415 85 16 0 chr13 101656299 101656488 -18627824 - B2_Mm2 SINE B2 -3 192 1 4 1360 261 357 108 19 chr13 101656752 101657020 -18627292 + LTR86A2 LTR ERVL 165 456 -52 4 1360 236 258 91 0 chr13 101658517 101658583 -18625729 - ID_B1 SINE B4 -17 207 136 4 1360 2866 117 78 56 chr13 101658649 101659164 -18625148 + RLTR11A LTR ERVK 1 526 -2 4 1360 340 247 53 99 chr13 101659337 101659564 -18624748 + MLT1C LTR MaLR 1 225 -280 4 1360 1128 138 24 61 chr13 101659588 101659835 -18624477 + RMER17D LTR ERVK 651 888 -1 4 1360 298 319 119 43 chr13 101659848 101660058 -18624254 + MLT1C LTR MaLR 242 467 0 4 1360 965 144 6 0 chr13 101660110 101660284 -18624028 + (TCCC)n Simple_repeat Simple_repeat 2 176 0 4 1360 601 265 48 27 chr13 101660704 101660890 -18623422 + B3A SINE B2 8 197 -1 4 1360 933 211 0 17 chr13 101660890 101661068 -18623244 + B3 SINE B2 1 175 -41 4 1360 3662 49 0 0 chr13 101661072 101661542 -18622770 - MT2C_Mm LTR ERVL -5 470 1 4 1360 243 133 0 0 chr13 101661542 101661584 -18622728 + B3 SINE B2 171 212 -4 4 1360 691 257 0 14 chr13 101661992 101662138 -18622174 - RSINE1 SINE B4 -19 146 3 4 1360 316 363 7 36 chr13 101663830 101663970 -18620342 - Tigger8 DNA MER2_type -13 653 518 4 1360 480 233 13 27 chr13 101664498 101664648 -18619664 + RLTR15 LTR ERVK 3 150 -209 4 1360 254 318 37 18 chr13 101665178 101665287 -18619025 - MLT1H LTR MaLR -336 213 103 4 1360 385 252 171 0 chr13 101665273 101665396 -18618916 + B4 SINE B4 77 220 -72 4 1360 607 156 18 44 chr13 101665288 101665402 -18618910 + PB1D9 SINE Alu 10 120 0 4 1360 224 82 48 16 chr13 101665402 101665464 -18618848 + (CAAAA)n Simple_repeat Simple_repeat 3 66 0 4 1360 1201 41 0 26 chr13 101666234 101666385 -18617927 - B1_Mus2 SINE Alu 0 147 1 4 1360 366 162 0 0 chr13 101666385 101666459 -18617853 + CT-rich Low_complexity Low_complexity 3 76 0 4 1360 303 292 75 69 chr13 101666476 101666649 -18617663 - L1MC LINE L1 -2132 5750 5577 4 1360 460 335 11 11 chr13 101667146 101667321 -18616991 - MER45A DNA Tip100 -1 177 3 4 1360 338 284 41 93 chr13 101667405 101667697 -18616615 - ORR1E LTR MaLR -16 363 79 4 1360 240 289 44 78 chr13 101667891 101668071 -18616241 + MLT1M LTR MaLR 135 308 -364 4 1360 249 108 0 0 chr13 101668413 101668450 -18615862 + (T)n Simple_repeat Simple_repeat 1 37 0 4 1360 2035 131 6 59 chr13 101669770 101670110 -18614202 + ORR1A3 LTR MaLR 5 326 0 4 1360 1372 198 116 6 chr13 101670251 101670586 -18613726 - ORR1D1 LTR MaLR -2 372 1 5 1360 306 73 0 0 chr13 101671075 101671116 -18613196 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1360 372 222 48 131 chr13 101671283 101671338 -18612974 + B1F1 SINE Alu 10 142 -7 5 1360 493 189 0 0 chr13 101671338 101671428 -18612884 + ID_B1 SINE B4 128 217 -7 5 1360 420 326 53 15 chr13 101671533 101671798 -18612514 - L1M5 LINE L1 -509 5615 5341 5 1360 21 57 0 0 chr13 101671813 101671848 -18612464 + AT_rich Low_complexity Low_complexity 1 35 0 5 1360 384 304 31 31 chr13 101671864 101671993 -18612319 - RSINE1 SINE B4 0 165 37 5 1360 289 309 19 58 chr13 101672373 101672476 -18611836 + Charlie4z DNA MER1_type 47 145 -22 5 1360 1273 220 92 49 chr13 101672586 101672954 -18611358 + ORR1C2 LTR MaLR 1 384 0 5 1360 240 319 26 26 chr13 101672967 101673083 -18611229 - L2c LINE L2 0 3387 3272 5 1360 2059 165 6 3 chr13 101673562 101673921 -18610391 + RLTR19 LTR ERVK 140 499 0 5 1360 776 190 0 21 chr13 101674157 101674302 -18610010 - B1_Mur1 SINE Alu -7 142 1 5 1360 1654 212 70 23 chr13 101674333 101674720 -18609592 - MTD LTR MaLR -14 405 1 5 1360 1888 138 81 75 chr13 101677179 101677563 -18606749 + ORR1B1 LTR MaLR 1 386 -8 5 1360 1085 95 0 0 chr13 101678024 101678172 -18606140 - B1_Mus1 SINE Alu 0 148 1 5 1360 1295 47 76 12 chr13 101678172 101678342 -18605970 - B2_Mm2 SINE B2 -11 184 3 5 1360 243 0 0 0 chr13 101678843 101678870 -18605442 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1360 726 52 0 0 chr13 101678870 101678967 -18605345 - B1_Mus2 SINE Alu -9 138 42 5 1360 27 29 0 0 chr13 101678989 101679023 -18605289 + AT_rich Low_complexity Low_complexity 1 34 0 5 1360 257 256 53 46 chr13 101679898 101680029 -18604283 - Lx7 LINE L1 0 7696 7565 5 1360 399 56 0 0 chr13 101680031 101680085 -18604227 + (CA)n Simple_repeat Simple_repeat 2 55 0 5 1360 709 229 95 66 chr13 101680087 101680298 -18604014 - Lx7 LINE L1 -289 7407 7191 5 1360 1053 275 108 9 chr13 101680394 101680728 -18603584 + MTE2b LTR MaLR 13 379 0 5 1360 495 0 0 0 chr13 101680897 101680952 -18603360 + (GA)n Simple_repeat Simple_repeat 2 56 0 5 1360 321 241 0 46 chr13 101681141 101681228 -18603084 - MIR3 SINE MIR -13 195 113 5 1360 299 238 11 35 chr13 101681349 101681436 -18602876 + ID_B1 SINE B4 86 170 -54 5 1360 253 278 25 92 chr13 101681436 101681468 -18602844 + PB1D10 SINE Alu 5 115 -2 5 1360 391 203 0 0 chr13 101681468 101681537 -18602775 + ID4 SINE ID 1 69 -14 5 1360 325 224 0 86 chr13 101681801 101681894 -18602418 - ID_B1 SINE B4 -7 217 133 5 1360 449 273 86 24 chr13 101682059 101682269 -18602043 - L2 LINE L2 -1037 2382 2160 5 1360 183 42 0 0 chr13 101682293 101682317 -18601995 + (TTA)n Simple_repeat Simple_repeat 1 24 0 5 1360 277 91 0 52 chr13 101682317 101682375 -18601937 - L1_Mus2 LINE L1 -10 6556 6502 5 1360 565 255 106 30 chr13 101682916 101683114 -18601198 - Lx8 LINE L1 -7 7466 7254 5 1360 460 278 148 16 chr13 101683177 101683360 -18600952 - ID_B1 SINE B4 -16 208 2 5 1360 281 283 0 66 chr13 101683379 101683485 -18600827 - BC1_Mm scRNA scRNA -53 99 1 5 1360 398 329 79 70 chr13 101684539 101684569 -18599743 - L1MD3 LINE L1 -502 7380 7358 5 1360 1695 201 46 46 chr13 101684569 101684663 -18599649 + MTD LTR MaLR 3 91 -328 5 1360 1118 96 0 0 chr13 101684663 101684809 -18599503 + B1_Mus1 SINE Alu 2 147 -1 5 1360 558 0 0 0 chr13 101684813 101684875 -18599437 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 1360 1695 201 46 46 chr13 101684875 101685192 -18599120 + MTD LTR MaLR 92 415 -4 5 1360 398 329 79 70 chr13 101685192 101685491 -18598821 - L1MD3 LINE L1 -525 7357 7053 5 1360 1107 216 5 0 chr13 101685537 101685745 -18598567 - ID_B1 SINE B4 -13 211 3 5 1360 279 283 80 10 chr13 101685753 101685853 -18598459 - L1M4 LINE L1 -573 5601 5495 5 1360 3031 55 0 3 chr13 101685943 101686322 -18597990 - L1Md_F2 LINE L1 0 6582 6205 5 1360 609 305 61 13 chr13 101686361 101686737 -18597575 - L1M4 LINE L1 -826 5320 4927 5 1360 490 220 21 12 chr13 101686808 101686929 -18597383 - L1MD3 LINE L1 -1166 6876 6725 5 1360 614 230 83 24 chr13 101687205 101687374 -18596938 - B3A SINE B2 -16 182 4 5 1360 2779 190 85 58 chr13 101687388 101688093 -18596219 - Lx9 LINE L1 -3 7641 6918 5 1360 5242 201 65 63 chr13 101688104 101688837 -18595475 - L1_Rod LINE L1 -1007 4840 4127 5 1360 2524 65 15 6 chr13 101688837 101689161 -18595151 - ORR1A2 LTR MaLR 0 327 1 5 1360 5242 201 65 63 chr13 101689161 101689818 -18594494 - L1_Rod LINE L1 -1721 4126 3496 5 1360 216 0 0 0 chr13 101689818 101689842 -18594470 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1360 5242 201 65 63 chr13 101689842 101689969 -18594343 - L1_Rod LINE L1 -2352 3495 3321 5 1360 826 188 0 26 chr13 101689969 101690122 -18594190 + B1_Mur2 SINE Alu 1 149 0 5 1360 226 264 0 53 chr13 101690230 101690306 -18594006 - L1_Rod LINE L1 -2748 3099 3028 5 1360 423 0 0 0 chr13 101690397 101690444 -18593868 + (CA)n Simple_repeat Simple_repeat 1 47 0 5 1360 462 91 0 0 chr13 101690444 101690521 -18593791 + (GA)n Simple_repeat Simple_repeat 1 77 0 5 1360 1082 305 84 25 chr13 101690543 101690758 -18593554 - L1MA4 LINE L1 -385 5915 5684 5 1360 567 0 0 0 chr13 101690758 101690821 -18593491 + (TC)n Simple_repeat Simple_repeat 2 64 0 5 1360 1082 305 84 25 chr13 101690821 101691176 -18593136 - L1MA4 LINE L1 -617 5683 5312 5 1360 42152 4 0 0 chr13 101691282 101697858 -18586454 - L1Md_A LINE L1 0 6582 7 5 1360 213 132 0 0 chr13 101698173 101698211 -18586101 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1360 788 184 0 67 chr13 101698700 101698910 -18585402 - Lx5 LINE L1 -880 6170 5975 5 1360 1185 43 0 0 chr13 101699722 101699863 -18584449 + B1_Mus2 SINE Alu 1 141 -6 5 1360 663 244 59 35 chr13 101700233 101700403 -18583909 + Lx8 LINE L1 7065 7238 -235 5 1360 954 166 0 0 chr13 101700403 101700578 -18583734 + CT-rich Low_complexity Low_complexity 1 175 0 5 1360 759 132 23 0 chr13 101700578 101700707 -18583605 - B1_Mur3 SINE Alu -8 141 10 5 1360 495 251 49 110 chr13 101700740 101700986 -18583326 + Lx8 LINE L1 7243 7473 0 5 1360 714 105 0 0 chr13 101701097 101701202 -18583110 + (GAAA)n Simple_repeat Simple_repeat 2 106 0 5 1360 595 265 105 112 chr13 101702464 101702749 -18581563 + ORR1E LTR MaLR 27 309 -50 5 1360 226 296 12 24 chr13 101702826 101702909 -18581403 - ID4_ SINE ID 0 83 2 5 1360 264 198 46 11 chr13 101702967 101703054 -18581258 - Lx5 LINE L1 -2 7048 6959 5 1360 912 217 5 32 chr13 101703052 101703242 -18581070 - Lx5 LINE L1 -336 6714 6530 5 1360 4693 46 2 0 chr13 101703883 101704445 -18579867 - L1Md_F2 LINE L1 0 6582 6020 5 1360 1321 20 0 0 chr13 101704445 101704592 -18579720 + L1_Mm LINE L1 5531 5677 -206 5 1360 3769 21 2 0 chr13 101704592 101705043 -18579269 - L1Md_A LINE L1 0 6582 6145 5 1360 4893 17 1 0 chr13 101705043 101705648 -18578664 + L1Md_A LINE L1 5547 6494 -503 5 1360 330 0 0 0 chr13 101705621 101705657 -18578655 + L1Md_A LINE L1 5671 5706 -948 5 1360 423 0 0 0 chr13 101705728 101705775 -18578537 + (TG)n Simple_repeat Simple_repeat 1 47 0 5 1360 964 139 0 0 chr13 101706068 101706205 -18578107 - B1_Mur4 SINE Alu -13 137 1 5 1360 234 0 0 0 chr13 101706363 101706389 -18577923 + (TG)n Simple_repeat Simple_repeat 2 27 0 5 1360 820 300 69 11 chr13 101706392 101706668 -18577644 - B4A SINE B4 0 292 1 5 1360 435 223 10 0 chr13 101706922 101707025 -18577287 - BC1_Mm scRNA scRNA -47 105 2 5 1360 365 208 144 10 chr13 101707030 101707127 -18577185 - PB1D10 SINE Alu -6 111 2 5 1360 700 232 14 7 chr13 101707440 101707583 -18576729 - ID_B1 SINE B4 -5 219 76 5 1360 735 221 6 47 chr13 101707568 101707739 -18576573 + B3 SINE B2 53 216 0 5 1360 279 0 0 0 chr13 101708767 101708798 -18575514 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1360 224 327 0 96 chr13 101708980 101709105 -18575207 + MIR SINE MIR 92 204 -58 5 1360 263 254 60 53 chr13 101709327 101709460 -18574852 - L1MC LINE L1 -2026 5856 5723 5 1360 761 151 198 61 chr13 101710448 101710645 -18573667 + URR1B DNA MER1_type 1 224 -1 5 1360 1039 63 0 7 chr13 101711438 101711581 -18572731 + B1_Mm SINE Alu 6 147 0 5 1360 217 0 61 0 chr13 101711588 101711621 -18572691 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1360 306 304 96 7 chr13 101711699 101711845 -18572467 - MER5A DNA MER1_type -24 165 7 5 1361 211 323 77 28 chr13 101711933 101712083 -18572229 + MIRb SINE MIR 13 179 -89 5 1361 824 255 44 5 chr13 101712138 101712343 -18571969 + ID_B1 SINE B4 4 216 -8 5 1361 5361 35 0 5 chr13 101712441 101713068 -18571244 + L1Md_F3 LINE L1 5947 6570 -14 5 1361 1968 60 0 0 chr13 101713795 101714044 -18570268 - L1Md_A LINE L1 0 6582 6334 5 1361 180 0 0 0 chr13 101715830 101715850 -18568462 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1361 2150 17 0 0 chr13 101716887 101717126 -18567186 + L1Md_T LINE L1 5348 5586 -297 5 1361 8581 33 0 0 chr13 101717126 101718122 -18566190 + L1Md_T LINE L1 5587 6582 0 5 1361 232 136 51 0 chr13 101718251 101718310 -18566002 + CT-rich Low_complexity Low_complexity 1 62 0 5 1361 380 284 0 0 chr13 101718310 101718398 -18565914 - L1MA9 LINE L1 -381 5931 5844 5 1361 1342 123 0 32 chr13 101718750 101718969 -18565343 + URR1A DNA MER1_type 15 226 0 5 1361 411 21 0 0 chr13 101719276 101719324 -18564988 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1361 347 340 68 21 chr13 101719426 101719501 -18564811 - Lx9 LINE L1 -57 7416 7334 5 1361 642 49 0 0 chr13 101719501 101719583 -18564729 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 5 1361 408 331 59 3 chr13 101719583 101719781 -18564531 - Lx9 LINE L1 -208 7436 7170 5 1361 256 210 15 46 chr13 101720050 101720115 -18564197 - tRNA-Ala-GCY_ tRNA tRNA -9 66 4 5 1361 414 0 0 0 chr13 101720730 101720776 -18563536 + (CA)n Simple_repeat Simple_repeat 1 46 0 5 1361 288 0 0 0 chr13 101720888 101720920 -18563392 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1361 239 281 56 0 chr13 101722821 101722921 -18561391 + B1F1 SINE Alu 1 110 -39 5 1361 464 171 0 15 chr13 101723570 101723594 -18560718 + polypyrimidine Low_complexity Low_complexity 108 130 0 5 1361 980 101 6 0 chr13 101723594 101723772 -18560540 + (CCTG)n Simple_repeat Simple_repeat 2 180 0 5 1361 464 171 0 15 chr13 101723772 101723878 -18560434 + CT-rich Low_complexity Low_complexity 2 107 0 5 1361 224 296 14 14 chr13 101725285 101725357 -18558955 + MIR SINE MIR 85 156 -106 6 1361 229 115 18 55 chr13 101725422 101725477 -18558835 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1361 694 301 39 5 chr13 101725646 101725820 -18558492 + B4 SINE B4 38 210 -82 6 1361 279 0 0 0 chr13 101725820 101725851 -18558461 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 6 1361 694 301 39 5 chr13 101725851 101725880 -18558432 + B4 SINE B4 211 247 -45 6 1361 296 283 121 21 chr13 101726007 101726148 -18558164 - RSINE1 SINE B4 -6 159 5 6 1361 695 246 93 102 chr13 101726783 101727127 -18557185 - MT2A LTR ERVL -7 526 186 6 1361 843 218 82 5 chr13 101727584 101727778 -18556534 - B3 SINE B2 -7 209 1 6 1361 201 147 0 0 chr13 101728203 101728237 -18556075 + (TTC)n Simple_repeat Simple_repeat 3 36 0 6 1361 277 306 0 12 chr13 101729634 101729720 -18554592 - PB1D10 SINE Alu -17 100 16 6 1361 480 35 0 0 chr13 101730369 101730427 -18553885 + (TATG)n Simple_repeat Simple_repeat 2 59 0 6 1361 309 300 118 0 chr13 101730733 101730843 -18553469 + MLT1A0 LTR MaLR 3 125 -240 6 1361 433 298 157 49 chr13 101730856 101731181 -18553131 - MLT1A1 LTR MaLR -12 396 37 6 1361 888 327 65 24 chr13 101731359 101731902 -18552410 - Lx8 LINE L1 -8 7465 6882 6 1361 225 154 0 0 chr13 101731923 101731962 -18552350 + CT-rich Low_complexity Low_complexity 2 40 0 6 1361 892 201 19 54 chr13 101732141 101732346 -18551966 - B3A SINE B2 0 198 1 6 1361 23 33 0 0 chr13 101732362 101732392 -18551920 + AT_rich Low_complexity Low_complexity 1 30 0 6 1361 331 375 18 53 chr13 101732423 101732592 -18551720 - RSINE1 SINE B4 -1 164 2 6 1361 226 280 181 11 chr13 101733353 101733447 -18550865 + MIRb SINE MIR 3 119 -149 6 1361 1044 261 30 34 chr13 101733739 101734079 -18550233 + MTEa LTR MaLR 3 334 -45 6 1361 1327 240 80 21 chr13 101734137 101734512 -18549800 - Lx9 LINE L1 -258 7386 6990 6 1361 1061 163 120 0 chr13 101734508 101734741 -18549571 + Lx9 LINE L1 7383 7643 -1 6 1361 583 282 139 11 chr13 101735473 101735753 -18548559 + MLT2B4 LTR ERVL 2 317 -239 6 1361 180 219 0 0 chr13 101735854 101735895 -18548417 + CT-rich Low_complexity Low_complexity 1 41 0 6 1361 648 269 22 60 chr13 101736465 101736647 -18547665 + B3A SINE B2 3 177 -21 6 1361 243 133 0 0 chr13 101736935 101736980 -18547332 + (CAAAT)n Simple_repeat Simple_repeat 2 46 0 6 1361 606 216 19 25 chr13 101737120 101737277 -18547035 + RMER1B Other Other 1 156 -910 6 1361 1228 129 200 4 chr13 101737272 101737537 -18546775 + RMER1A Other Other 709 1025 -5 6 1361 395 200 13 0 chr13 101737693 101737768 -18546544 - PB1D10 SINE Alu -21 96 21 6 1361 8774 108 62 1 chr13 101737790 101739103 -18545209 - Lx2 LINE L1 -17 6980 5588 6 1361 3028 68 39 7 chr13 101739095 101739536 -18544776 - MusHAL1 LINE L1 -2114 598 144 6 1361 26 88 0 0 chr13 101739536 101739604 -18544708 + AT_rich Low_complexity Low_complexity 1 68 0 6 1361 352 213 34 85 chr13 101740076 101740194 -18544118 + PB1 SINE Alu 14 125 -2 6 1361 314 231 25 13 chr13 101740204 101740283 -18544029 + ID4_ SINE ID 2 81 -2 6 1361 184 246 99 28 chr13 101740403 101740474 -18543838 - MIR SINE MIR -19 243 168 6 1361 251 176 9 133 chr13 101740510 101740615 -18543697 - L1MA6 LINE L1 -7 6293 6202 6 1361 200 352 31 39 chr13 101740683 101740813 -18543499 - MIRm SINE MIR -126 150 22 6 1361 1979 225 22 94 chr13 101741341 101741886 -18542426 + RLTR18B LTR ERVK 1 506 -6 6 1361 924 188 205 20 chr13 101742358 101742602 -18541710 + ORR1D1 LTR MaLR 1 289 -85 6 1361 771 187 48 6 chr13 101742613 101742780 -18541532 + ORR1D1 LTR MaLR 200 373 -1 6 1361 1243 102 10 10 chr13 101742780 101743172 -18541140 + (TCTA)n Simple_repeat Simple_repeat 1 392 0 6 1361 2024 208 77 58 chr13 101743321 101743922 -18540390 - L1MA7 LINE L1 -3 6288 5677 6 1361 522 291 171 32 chr13 101744538 101744854 -18539458 - MamGypLTR1a LTR Gypsy -1 783 424 6 1361 692 212 46 31 chr13 101747935 101748119 -18536193 - B3A SINE B2 -3 213 22 6 1361 1420 70 38 0 chr13 101748320 101748506 -18535806 - B2_Mm2 SINE B2 -1 194 2 6 1361 218 253 79 13 chr13 101748590 101748666 -18535646 - MIRb SINE MIR -168 100 20 6 1361 904 48 29 35 chr13 101749434 101749608 -18534704 + (TCTCC)n Simple_repeat Simple_repeat 2 174 0 6 1361 515 235 0 98 chr13 101749637 101749682 -18534630 - B1_Mur3 SINE Alu -29 120 80 6 1361 3062 17 0 11 chr13 101749682 101750032 -18534280 + ORR1A0 LTR MaLR 1 346 0 6 1361 515 235 0 98 chr13 101750032 101750118 -18534194 - B1_Mur3 SINE Alu -70 79 2 6 1361 1100 36 66 0 chr13 101750146 101750283 -18534029 - B1_Mm SINE Alu 0 147 2 6 1361 413 266 21 14 chr13 101750314 101750455 -18533857 - L1MC4 LINE L1 -744 7298 7157 6 1361 1398 271 128 24 chr13 101750706 101751338 -18532974 + L1MA8 LINE L1 5347 6044 -247 6 1361 36150 37 0 0 chr13 101751336 101756278 -18528034 + L1Md_T LINE L1 551 5589 -297 6 1361 9088 7 1 0 chr13 101756278 101757273 -18527039 + L1Md_T LINE L1 5590 6585 0 6 1361 226 182 75 15 chr13 101757308 101757375 -18526937 + L1MA8 LINE L1 6028 6098 -193 6 1361 332 257 0 0 chr13 101757429 101757503 -18526809 - B4A SINE B4 -2 290 217 6 1361 306 280 13 0 chr13 101757558 101757633 -18526679 - RSINE1 SINE B4 -84 81 6 6 1361 661 264 25 83 chr13 101757639 101757879 -18526433 - B4A SINE B4 -64 228 3 6 1361 351 0 0 0 chr13 101757970 101758009 -18526303 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1361 2367 140 63 8 chr13 101758014 101758411 -18525901 + Lx4A LINE L1 6637 7055 -3 6 1361 225 0 0 0 chr13 101758677 101758702 -18525610 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1361 207 0 0 0 chr13 101759070 101759093 -18525219 + (TGGGGG)n Simple_repeat Simple_repeat 1 23 0 6 1361 411 222 48 0 chr13 101761087 101761193 -18523119 - L1MA5 LINE L1 -43 6254 6140 6 1361 344 258 107 143 chr13 101761193 101761465 -18522847 + RLTR15 LTR ERVK 1 262 -97 6 1361 927 295 121 12 chr13 101761708 101761865 -18522447 - L1MA5 LINE L1 -289 6011 5839 6 1361 1628 32 11 0 chr13 101761865 101762053 -18522259 - B2_Mm1a SINE B2 -3 190 1 6 1361 927 295 121 12 chr13 101762053 101762232 -18522080 - L1MA5 LINE L1 -462 5838 5644 6 1361 315 0 0 0 chr13 101762232 101762267 -18522045 + (CA)n Simple_repeat Simple_repeat 2 36 0 6 1361 927 295 121 12 chr13 101762267 101762381 -18521931 - L1MA5 LINE L1 -657 5643 5511 6 1361 447 19 0 0 chr13 101762381 101762433 -18521879 + (TC)n Simple_repeat Simple_repeat 1 52 0 6 1361 927 295 121 12 chr13 101762433 101762460 -18521852 - L1MA5 LINE L1 -790 5510 5484 6 1361 693 158 1 0 chr13 101762468 101762590 -18521722 - B1_Mur1 SINE Alu -14 135 13 6 1361 38 39 0 0 chr13 101763264 101763316 -18520996 + AT_rich Low_complexity Low_complexity 1 52 0 6 1361 189 147 0 0 chr13 101764819 101764853 -18519459 + (CAAAC)n Simple_repeat Simple_repeat 3 36 0 6 1361 1992 240 58 30 chr13 101765482 101765579 -18518733 - Lx9 LINE L1 -10 7634 7533 6 1361 895 100 7 14 chr13 101765579 101765721 -18518591 - L1_Mus2 LINE L1 0 6566 6426 6 1361 1992 240 58 30 chr13 101765721 101765761 -18518551 - Lx9 LINE L1 -112 7532 7477 6 1361 399 21 0 0 chr13 101765761 101765809 -18518503 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1361 1992 240 58 30 chr13 101765809 101766306 -18518006 - Lx9 LINE L1 -168 7476 6982 6 1361 1194 107 0 0 chr13 101766479 101766875 -18517437 + (TG)n Simple_repeat Simple_repeat 1 396 0 6 1361 487 301 32 0 chr13 101766880 101767036 -18517276 - RSINE1 SINE B4 -2 163 3 6 1361 208 353 52 15 chr13 101767968 101768103 -18516209 - L2b LINE L2 -189 3186 3047 6 1361 677 330 70 39 chr13 101768243 101768731 -18515581 - MLT1D LTR MaLR -2 503 1 6 1361 316 338 91 15 chr13 101769087 101769351 -18514961 - B4A SINE B4 -8 284 1 6 1361 238 212 136 0 chr13 101770048 101770114 -18514198 + PB1D9 SINE Alu 2 76 -44 6 1361 801 307 34 30 chr13 101770117 101770382 -18513930 + B4 SINE B4 1 266 -26 6 1361 438 20 0 0 chr13 101770384 101770435 -18513877 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1361 638 193 0 0 chr13 101770596 101770705 -18513607 - PB1D9 SINE Alu -7 113 5 6 1361 465 19 0 0 chr13 101771449 101771503 -18512809 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1361 537 299 58 45 chr13 101771509 101771733 -18512579 - B4A SINE B4 -64 228 2 6 1361 499 264 0 24 chr13 101771744 101771868 -18512444 - ID_B1 SINE B4 -9 215 95 6 1361 510 138 37 18 chr13 101772065 101772228 -18512084 + (TA)n Simple_repeat Simple_repeat 2 167 0 6 1361 446 209 55 48 chr13 101773228 101773374 -18510938 + L1M3 LINE L1 5452 5598 -585 6 1361 4519 50 72 0 chr13 101773384 101773963 -18510349 + L1_Mus1 LINE L1 5945 6565 -2 6 1361 307 98 36 0 chr13 101774130 101774191 -18510121 + L1M3 LINE L1 5741 5807 -367 6 1361 269 313 8 34 chr13 101774196 101774315 -18509997 + ID_B1 SINE B4 79 194 -30 6 1361 285 289 21 154 chr13 101774199 101774342 -18509970 + PB1D10 SINE Alu 1 124 -3 6 1361 1428 263 117 26 chr13 101774361 101774830 -18509482 + Lx5 LINE L1 6521 7032 -18 6 1361 213 209 0 0 chr13 101775058 101775101 -18509211 + (CACAA)n Simple_repeat Simple_repeat 2 44 0 6 1361 455 292 45 18 chr13 101775138 101775361 -18508951 + L1MB3 LINE L1 5953 6181 -2 6 1361 1192 232 60 57 chr13 101775385 101775751 -18508561 - MTEa LTR MaLR -4 375 9 6 1361 947 229 27 9 chr13 101776739 101776964 -18507348 - L1MB8 LINE L1 -9 6169 5941 6 1361 308 222 111 70 chr13 101777122 101777270 -18507042 + MTC LTR MaLR 199 421 0 6 1361 3725 52 6 22 chr13 101779739 101780231 -18504081 - L1Md_F2 LINE L1 -1 6581 6098 6 1361 1168 204 82 10 chr13 101780291 101780597 -18503715 + RMER19B LTR ERVK 41 383 -354 6 1361 2462 174 70 12 chr13 101780596 101781108 -18503204 + RMER19B LTR ERVK 349 890 -12 6 1361 253 174 163 65 chr13 101781270 101781362 -18502950 + MTEa LTR MaLR 279 379 0 6 1361 667 210 355 11 chr13 101782402 101782667 -18501645 - ORR1E LTR MaLR -3 356 1 6 1361 351 306 34 14 chr13 101784638 101784784 -18499528 + ORR1E LTR MaLR 1 149 -210 6 1361 397 329 73 49 chr13 101785498 101785786 -18498526 - LTR16A1 LTR ERVL -4 452 158 6 1361 303 146 91 0 chr13 101785819 101785929 -18498383 + (TA)n Simple_repeat Simple_repeat 2 121 0 6 1361 283 391 21 37 chr13 101786983 101787072 -18497240 + MIR SINE MIR 70 158 -104 6 1361 4250 158 13 7 chr13 101787072 101787760 -18496552 - RLTR17 LTR ERVK 0 692 1 6 1361 283 391 21 37 chr13 101787760 101787861 -18496451 + MIR SINE MIR 159 257 -5 6 1361 21 57 0 0 chr13 101787919 101787954 -18496358 + AT_rich Low_complexity Low_complexity 1 35 0 7 1361 32 26 0 0 chr13 101787968 101788007 -18496305 + AT_rich Low_complexity Low_complexity 1 39 0 7 1361 504 250 34 14 chr13 101788022 101788168 -18496144 - ORR1E LTR MaLR -210 149 1 7 1361 567 311 106 0 chr13 101788192 101788353 -18495959 - B3 SINE B2 -37 179 2 7 1361 546 180 79 36 chr13 101788390 101788531 -18495781 + B1F SINE Alu 12 210 -101 7 1361 216 0 0 0 chr13 101789849 101789873 -18494439 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 7 1361 214 290 91 75 chr13 101789886 101790151 -18494161 - L2a LINE L2 -6 3420 3152 7 1361 299 96 19 0 chr13 101790387 101790439 -18493873 + (GA)n Simple_repeat Simple_repeat 1 53 0 7 1361 24 0 0 0 chr13 101790789 101790813 -18493499 + AT_rich Low_complexity Low_complexity 1 24 0 7 1361 1869 314 57 20 chr13 101790814 101791565 -18492747 - Lx8 LINE L1 -1 7472 6694 7 1361 5153 35 0 0 chr13 101791595 101792191 -18492121 - L1Md_T LINE L1 -1 6581 5986 7 1361 1564 183 28 107 chr13 101792248 101792640 -18491672 - ORR1D1 LTR MaLR 0 374 14 7 1361 613 300 11 5 chr13 101792659 101792850 -18491462 - Lx8 LINE L1 -848 6625 6434 7 1361 622 240 99 27 chr13 101792889 101793112 -18491200 - L1_Mur3 LINE L1 -2474 3406 3168 7 1361 629 300 80 23 chr13 101793084 101793435 -18490877 - L1_Mur3 LINE L1 -2993 2887 2517 7 1361 480 247 21 0 chr13 101793448 101793545 -18490767 - B1_Mur1 SINE Alu -14 135 37 7 1361 1546 264 69 37 chr13 101793577 101794230 -18490082 - L1_Mur3 LINE L1 -3961 1919 1246 7 1361 267 122 0 0 chr13 101794264 101794313 -18489999 + (CAGA)n Simple_repeat Simple_repeat 4 52 0 7 1361 27 29 0 0 chr13 101794355 101794389 -18489923 + AT_rich Low_complexity Low_complexity 1 34 0 7 1361 688 112 8 25 chr13 101794430 101794549 -18489763 - Lx2 LINE L1 -1 6996 6880 7 1361 964 150 7 0 chr13 101794555 101794708 -18489604 - ORR1D1 LTR MaLR -218 156 3 7 1361 23 0 0 0 chr13 101794715 101794738 -18489574 + AT_rich Low_complexity Low_complexity 1 23 0 7 1361 243 329 65 19 chr13 101794756 101795066 -18489246 - L1_Mur3 LINE L1 -6506 1222 899 7 1361 212 143 0 0 chr13 101795493 101795528 -18488784 - B3 SINE B2 -86 130 96 7 1361 921 279 10 47 chr13 101795570 101795871 -18488441 - B4 SINE B4 0 292 3 7 1361 297 301 21 0 chr13 101796038 101796131 -18488181 - MER94 DNA AcHobo -13 121 27 7 1361 22 35 0 0 chr13 101796756 101796785 -18487527 + AT_rich Low_complexity Low_complexity 1 29 0 7 1361 274 335 82 0 chr13 101796848 101797006 -18487306 - L2a LINE L2 -22 3404 3234 7 1361 649 277 70 1 chr13 101797138 101797330 -18486982 - B3A SINE B2 0 216 8 7 1361 183 344 21 10 chr13 101797355 101797452 -18486860 - L2a LINE L2 -616 2803 2706 7 1361 211 310 121 0 chr13 101798390 101798506 -18485806 + MIR SINE MIR 39 168 -94 7 1361 901 275 0 0 chr13 101798521 101798732 -18485580 - ID_B1 SINE B4 0 224 14 7 1361 410 236 57 83 chr13 101799187 101799223 -18485089 - MLT1A0 LTR MaLR 0 408 369 7 1361 1257 258 27 78 chr13 101799223 101799597 -18484715 - ORR1E LTR MaLR 0 359 5 7 1361 422 232 98 135 chr13 101799597 101799934 -18484378 - MLT1A0 LTR MaLR -40 368 2 7 1361 401 244 194 29 chr13 101799985 101800124 -18484188 - RSINE1 SINE B4 -2 163 2 7 1361 243 304 60 60 chr13 101800275 101800408 -18483904 - MER63A DNA AcHobo -70 140 8 7 1361 216 95 47 23 chr13 101800481 101800524 -18483788 + T-rich Low_complexity Low_complexity 4 47 0 7 1361 624 262 77 0 chr13 101800532 101800720 -18483592 - B3A SINE B2 -8 208 2 7 1361 268 189 0 26 chr13 101800794 101800870 -18483442 + CT-rich Low_complexity Low_complexity 1 74 0 7 1361 225 328 110 15 chr13 101801132 101801268 -18483044 + MLT1K LTR MaLR 337 485 -110 7 1361 333 371 49 17 chr13 101801873 101802161 -18482151 - MT2A LTR ERVL -175 358 62 7 1361 442 318 37 74 chr13 101802014 101802178 -18482134 - MTEa LTR MaLR -168 211 53 7 1361 761 175 223 27 chr13 101802178 101802366 -18481946 - URR1B DNA MER1_type 0 225 1 7 1361 442 318 37 74 chr13 101802366 101802418 -18481894 - MTEa LTR MaLR -327 52 3 7 1361 311 276 108 23 chr13 101803424 101803554 -18480758 + L1MB2 LINE L1 5911 6051 -120 7 1361 339 85 0 0 chr13 101804637 101804684 -18479628 + (TTC)n Simple_repeat Simple_repeat 2 48 0 7 1361 211 226 16 0 chr13 101804952 101805014 -18479298 + A-rich Low_complexity Low_complexity 3 65 0 7 1361 2366 104 3 15 chr13 101805065 101805398 -18478914 + ORR1A4 LTR MaLR 1 329 0 7 1361 212 0 36 0 chr13 101805537 101805565 -18478747 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 7 1361 1020 294 40 9 chr13 101805907 101806233 -18478079 - MLT1A0 LTR MaLR -4 361 26 7 1361 386 218 26 0 chr13 101806628 101806706 -18477606 - ID4_ SINE ID -2 81 2 7 1361 1918 156 77 11 chr13 101806767 101807129 -18477183 - ORR1B1 LTR MaLR -8 386 1 7 1361 1199 281 98 42 chr13 101807413 101808036 -18476276 - L1MA8 LINE L1 -380 5911 5254 7 1361 23 0 0 0 chr13 101808040 101808063 -18476249 + AT_rich Low_complexity Low_complexity 1 23 0 7 1361 245 189 0 0 chr13 101808196 101808249 -18476063 + A-rich Low_complexity Low_complexity 1 53 0 7 1361 365 170 0 11 chr13 101808569 101808658 -18475654 + CT-rich Low_complexity Low_complexity 2 89 0 7 1361 680 273 123 4 chr13 101809704 101809965 -18474347 - MT2A LTR ERVL 0 533 242 7 1361 594 128 0 0 chr13 101809967 101810061 -18474251 + (CAT)n Simple_repeat Simple_repeat 2 95 0 7 1361 21 0 0 0 chr13 101810433 101810454 -18473858 + AT_rich Low_complexity Low_complexity 1 21 0 7 1361 273 328 68 17 chr13 101810927 101811045 -18473267 + MIRb SINE MIR 87 210 -58 7 1361 378 0 0 0 chr13 101811400 101811442 -18472870 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1361 22 0 0 0 chr13 101811451 101811473 -18472839 + AT_rich Low_complexity Low_complexity 1 22 0 7 1361 228 149 0 0 chr13 101811899 101811946 -18472366 + (CAA)n Simple_repeat Simple_repeat 2 48 0 7 1361 354 189 43 5 chr13 101811990 101812091 -18472221 - PB1D7 SINE Alu -13 136 32 7 1361 192 97 0 0 chr13 101812144 101812175 -18472137 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1361 215 182 0 0 chr13 101812427 101812471 -18471841 - ID4 SINE ID -9 74 31 7 1361 413 256 55 23 chr13 101812498 101812626 -18471686 - B1F SINE Alu -5 144 13 7 1361 38742 30 0 1 chr13 101812672 101819343 -18464969 - L1Md_T LINE L1 0 6585 1 7 1361 213 315 64 21 chr13 101819978 101820072 -18464240 + L2a LINE L2 2857 2954 -465 7 1361 336 322 26 53 chr13 101820118 101820308 -18464004 + L2a LINE L2 3057 3241 -185 7 1361 351 136 0 0 chr13 101820410 101820469 -18463843 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1361 324 158 0 0 chr13 101820468 101820525 -18463787 + (TA)n Simple_repeat Simple_repeat 2 58 0 7 1361 298 324 0 0 chr13 101820768 101820836 -18463476 - ID4 SINE ID -4 79 12 7 1361 647 185 0 0 chr13 101820920 101821028 -18463284 - PB1D9 SINE Alu -7 113 6 7 1361 399 232 0 74 chr13 101821130 101821265 -18463047 - BC1_Mm scRNA scRNA -27 125 1 7 1361 908 254 38 3 chr13 101821435 101821769 -18462543 - L1MA4 LINE L1 -375 5925 5583 7 1361 266 240 89 50 chr13 101821865 101821966 -18462346 - MTEa LTR MaLR -37 342 238 7 1361 612 125 0 0 chr13 101821968 101822064 -18462248 + (GA)n Simple_repeat Simple_repeat 1 96 0 7 1361 378 342 0 9 chr13 101822135 101822247 -18462065 - MTEa LTR MaLR -268 111 1 7 1361 3759 299 72 30 chr13 101822250 101822465 -18461847 - MTEa-int LTR MaLR -3 1577 1360 7 1361 411 21 0 0 chr13 101822465 101822513 -18461799 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1361 3759 295 73 32 chr13 101822513 101823716 -18460596 - MTEa-int LTR MaLR -221 1359 71 7 1361 514 312 22 34 chr13 101823721 101823900 -18460412 - B4A SINE B4 -113 179 3 7 1361 372 43 0 0 chr13 101824022 101824068 -18460244 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1361 597 281 92 18 chr13 101824080 101824243 -18460069 - B4A SINE B4 -116 176 2 7 1361 35 41 0 0 chr13 101824391 101824440 -18459872 + AT_rich Low_complexity Low_complexity 1 49 0 7 1361 1872 163 52 6 chr13 101824540 101824885 -18459427 - ORR1B2 LTR MaLR -1 366 6 7 1361 554 299 0 0 chr13 101825217 101825344 -18458968 + RSINE1 SINE B4 13 139 -26 7 1361 231 114 0 0 chr13 101828117 101828161 -18456151 + (TC)n Simple_repeat Simple_repeat 1 44 0 7 1361 481 305 0 41 chr13 101828199 101828346 -18455966 - RSINE1 SINE B4 -21 144 4 7 1361 881 293 73 10 chr13 101829114 101829414 -18454898 - MER2 DNA MER2_type -26 319 1 7 1361 425 241 46 0 chr13 101829477 101829585 -18454727 - L1MA8 LINE L1 -34 6257 6145 7 1361 1181 244 16 19 chr13 101829589 101829906 -18454406 - MLT1A0 LTR MaLR -43 322 7 7 1361 28 95 0 0 chr13 101829923 101830007 -18454305 + AT_rich Low_complexity Low_complexity 1 84 0 7 1361 202 179 18 18 chr13 101830225 101830282 -18454030 + (TG)n Simple_repeat Simple_repeat 1 57 0 7 1361 775 303 83 8 chr13 101830303 101830556 -18453756 - B4A SINE B4 -16 276 5 7 1361 193 53 25 50 chr13 101831574 101831614 -18452698 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 7 1361 216 0 0 0 chr13 101831707 101831731 -18452581 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 7 1361 243 0 0 0 chr13 101832045 101832072 -18452240 + (CAA)n Simple_repeat Simple_repeat 3 29 0 7 1361 272 387 13 7 chr13 101832262 101832413 -18451899 - MIRb SINE MIR -83 185 34 7 1361 378 0 0 0 chr13 101833366 101833408 -18450904 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1361 6894 114 43 28 chr13 101833562 101833719 -18450593 - Lx4A LINE L1 0 7058 6890 7 1361 2892 54 3 0 chr13 101833719 101834050 -18450262 + IAPEY3_LTR LTR ERVK 1 332 0 7 1361 6894 114 43 28 chr13 101834050 101834938 -18449374 - Lx4A LINE L1 -169 6889 5997 7 1361 235 125 0 0 chr13 101834939 101834971 -18449341 - Lx3A LINE L1 -704 6277 6246 7 1361 2330 215 19 138 chr13 101834978 101835317 -18448995 - Lx4A LINE L1 -722 6278 6019 7 1361 5499 70 3 3 chr13 101835317 101836002 -18448310 + Lx3_Mus LINE L1 6317 7001 -8 7 1361 2995 79 23 34 chr13 101836002 101836447 -18447865 - Lx4A LINE L1 -982 6018 5587 7 1361 252 182 0 0 chr13 101836601 101836645 -18447667 - L1ME1 LINE L1 -251 5928 5885 7 1361 527 349 85 36 chr13 101836924 101837032 -18447280 - Lx7 LINE L1 -29 7444 7324 7 1361 465 19 0 0 chr13 101837032 101837086 -18447226 + (CA)n Simple_repeat Simple_repeat 2 55 0 7 1361 923 328 39 12 chr13 101837086 101837423 -18446889 - Lx7 LINE L1 -150 7323 6965 7 1361 224 167 0 0 chr13 101837423 101837459 -18446853 - PB1D10 SINE Alu -11 106 71 7 1361 311 340 156 8 chr13 101837648 101837891 -18446421 - Charlie20a DNA Charlie -485 322 44 8 1361 562 306 32 0 chr13 101839237 101839361 -18444951 + RSINE1 SINE B4 13 140 -25 8 1361 2497 204 77 9 chr13 101840158 101840718 -18443594 - Lx9 LINE L1 -1 7643 7046 8 1361 657 291 125 10 chr13 101840787 101841215 -18443097 - L1M4 LINE L1 -1984 5801 5308 8 1361 1194 85 0 0 chr13 101841298 101841439 -18442873 + B1_Mus1 SINE Alu 1 141 -7 8 1361 333 68 0 0 chr13 101841509 101841553 -18442759 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 8 1361 345 45 0 0 chr13 101841553 101841597 -18442715 - B2_Mm1t SINE B2 -35 158 115 8 1361 1057 299 96 82 chr13 101841601 101842491 -18441821 - L1M4 LINE L1 -983 5163 4262 8 1361 315 0 0 0 chr13 101842500 101842535 -18441777 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 8 170 1047 295 112 77 chr13 101842831 101843097 -18441215 - L1MA5A LINE L1 -301 5996 5658 8 1362 301 267 11 189 chr13 101843097 101843277 -18441035 - B1_Mus1 SINE Alu 0 148 1 8 1362 1047 295 107 88 chr13 101843277 101844294 -18440018 - L1MA5A LINE L1 -190 5657 4605 8 1362 216 231 0 0 chr13 101844294 101844333 -18439979 - B4 SINE B4 -252 40 2 8 1362 22 0 0 0 chr13 101844418 101844440 -18439872 + AT_rich Low_complexity Low_complexity 1 22 0 8 1362 24 0 0 0 chr13 101844993 101845017 -18439295 + AT_rich Low_complexity Low_complexity 1 24 0 8 1362 235 80 39 20 chr13 101845528 101845579 -18438733 + (CAAAA)n Simple_repeat Simple_repeat 4 55 0 8 1362 2886 292 139 62 chr13 101845596 101846674 -18437638 - Lx8 LINE L1 -127 7346 6155 8 1362 936 269 46 71 chr13 101846674 101846954 -18437358 - B4A SINE B4 -18 274 2 8 1362 2886 294 107 36 chr13 101846954 101848451 -18435861 - Lx8 LINE L1 -1319 6154 4562 8 1362 834 164 20 33 chr13 101848545 101848696 -18435616 - B1_Mur1 SINE Alu 0 149 1 8 1362 218 206 15 31 chr13 101848796 101848861 -18435451 + (TTATA)n Simple_repeat Simple_repeat 4 67 0 8 1362 294 29 0 0 chr13 101849061 101849096 -18435216 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1362 386 143 72 62 chr13 101849269 101849366 -18434946 + MER53 DNA hAT 96 193 0 8 1362 538 39 26 0 chr13 101850045 101850122 -18434190 + (TG)n Simple_repeat Simple_repeat 1 79 0 8 1362 897 270 30 5 chr13 101850130 101850327 -18433985 - B4A SINE B4 -18 274 73 8 1362 185 312 165 16 chr13 101850368 101850495 -18433817 + L2a LINE L2 3277 3422 -4 8 1362 795 306 110 38 chr13 101850748 101851094 -18433218 - MTD LTR MaLR -31 388 18 8 1362 1055 207 181 7 chr13 101851684 101851789 -18432523 - Lx9 LINE L1 -9 7635 7517 8 1362 306 87 0 0 chr13 101851789 101851835 -18432477 + (CA)n Simple_repeat Simple_repeat 2 47 0 8 1362 1055 207 181 7 chr13 101851835 101852016 -18432296 - Lx9 LINE L1 -128 7516 7300 8 1362 446 324 195 26 chr13 101853369 101853893 -18430419 + L2b LINE L2 2530 3158 -217 8 1362 25 0 0 0 chr13 101854115 101854140 -18430172 + AT_rich Low_complexity Low_complexity 1 25 0 8 1362 1971 183 25 33 chr13 101854808 101854941 -18429371 - ORR1B2 LTR MaLR 0 367 234 8 1362 2375 100 6 33 chr13 101854941 101855273 -18429039 - ORR1A2 LTR MaLR -4 323 1 8 1362 1971 183 25 33 chr13 101855273 101855507 -18428805 - ORR1B2 LTR MaLR -134 233 3 8 1362 318 345 75 43 chr13 101855782 101855970 -18428342 + LTR84a LTR ERVL 33 226 -531 8 1362 2338 138 25 11 chr13 101855977 101856366 -18427946 + ORR1B1 LTR MaLR 1 367 -3 8 1362 475 16 15 15 chr13 101856381 101856446 -18427866 + (TC)n Simple_repeat Simple_repeat 1 65 0 8 1362 18458 92 29 7 chr13 101856449 101857827 -18426485 + L1_Mur2 LINE L1 2061 3469 -2408 8 1362 414 0 0 0 chr13 101857827 101857873 -18426439 + (CAA)n Simple_repeat Simple_repeat 3 48 0 8 1362 18458 92 29 7 chr13 101857873 101859200 -18425112 + L1_Mur2 LINE L1 3470 4824 -1053 8 1362 9643 120 26 21 chr13 101859198 101860692 -18423620 + Lx4A LINE L1 5587 7058 0 8 1362 460 19 0 0 chr13 101860717 101860770 -18423542 + ORR1A4 LTR MaLR 277 329 0 8 1362 319 296 9 9 chr13 101860835 101860944 -18423368 - MER94 DNA AcHobo -5 129 21 8 1362 462 298 20 78 chr13 101860998 101861151 -18423161 - MER2B DNA MER2_type 0 336 193 8 1362 189 0 0 0 chr13 101861155 101861176 -18423136 + (TTA)n Simple_repeat Simple_repeat 2 22 0 8 1362 366 318 27 18 chr13 101861180 101861292 -18423020 + ID_B1 SINE B4 90 202 -22 8 1362 290 261 63 32 chr13 101861426 101861521 -18422791 + URR1B DNA MER1_type 1 98 -127 8 1362 408 211 0 13 chr13 101861592 101861669 -18422643 - PB1D10 SINE Alu -1 116 41 8 1362 275 320 0 0 chr13 101861685 101861763 -18422549 - MER2B DNA MER2_type -257 79 2 8 1362 352 276 75 50 chr13 101861914 101862074 -18422238 + LTR84a LTR ERVL 561 724 -33 8 1362 1083 234 63 38 chr13 101863780 101864096 -18420216 - ORR1E LTR MaLR -10 349 26 8 1362 405 342 139 45 chr13 101864632 101865079 -18419233 + L1M5 LINE L1 4564 5052 -1094 8 1362 542 100 71 0 chr13 101865484 101865624 -18418688 + (TG)n Simple_repeat Simple_repeat 1 150 0 8 1362 183 155 47 23 chr13 101865646 101865732 -18418580 + (TG)n Simple_repeat Simple_repeat 1 88 0 8 1362 592 108 58 0 chr13 101865754 101865893 -18418419 + (TG)n Simple_repeat Simple_repeat 1 147 0 8 1362 289 259 17 0 chr13 101865895 101865953 -18418359 - ID4 SINE ID -20 63 5 8 1362 2412 199 117 36 chr13 101866007 101866761 -18417551 - Lx9 LINE L1 -1655 5989 5152 8 1362 4269 71 8 0 chr13 101867310 101867834 -18416478 + L1_Mus3 LINE L1 6105 6632 -6 8 1362 415 91 29 29 chr13 101868072 101868174 -18416138 + (TATAA)n Simple_repeat Simple_repeat 2 103 0 8 1362 26 0 0 0 chr13 101868178 101868204 -18416108 + AT_rich Low_complexity Low_complexity 1 26 0 8 1362 510 46 0 0 chr13 101868284 101868349 -18415963 + (TG)n Simple_repeat Simple_repeat 1 65 0 8 1362 314 238 165 12 chr13 101868368 101868453 -18415859 - RSINE1 SINE B4 -67 98 1 8 1362 501 269 111 48 chr13 101868495 101868811 -18415501 - Lx7 LINE L1 -4 7692 7357 8 1362 24 32 0 0 chr13 101868859 101868890 -18415422 + AT_rich Low_complexity Low_complexity 1 31 0 8 1362 377 351 188 22 chr13 101868953 101869486 -18414826 - Arthur1 DNA Tip100 -3306 641 21 8 1362 510 109 20 10 chr13 101870466 101870568 -18413744 + (CA)n Simple_repeat Simple_repeat 1 103 0 8 1362 219 69 0 0 chr13 101870568 101870597 -18413715 + (TC)n Simple_repeat Simple_repeat 1 29 0 8 1362 442 353 121 75 chr13 101870920 101871012 -18413300 + LTR16D LTR ERVL 18 106 -545 8 1362 513 32 0 0 chr13 101871012 101871075 -18413237 + (TG)n Simple_repeat Simple_repeat 2 64 0 8 1362 3878 116 5 14 chr13 101871075 101871641 -18412671 - Lx LINE L1 -19 6635 6075 8 1362 442 353 121 75 chr13 101871641 101872150 -18412162 + LTR16D LTR ERVL 107 647 -4 8 1362 426 227 62 18 chr13 101872214 101872326 -18411986 - PB1D10 SINE Alu 0 117 1 8 1362 910 275 19 5 chr13 101872825 101873033 -18411279 + B3 SINE B2 4 214 -2 8 1362 1218 148 0 139 chr13 101873194 101873453 -18410859 + RMER19B LTR ERVK 1 223 -679 8 1362 2276 184 98 26 chr13 101873474 101873976 -18410336 + RMER19B LTR ERVK 353 890 -12 8 1362 226 184 0 0 chr13 101873983 101874021 -18410291 + RMER15 LTR ERVL 2 39 -536 8 1362 2561 217 27 4 chr13 101874084 101874598 -18409714 + RMER15 LTR ERVL 48 573 -2 8 1362 369 270 200 55 chr13 101874654 101874854 -18409458 - LTR16B2 LTR ERVL -13 449 221 8 1362 865 217 268 4 chr13 101874893 101875147 -18409165 - Lx2B LINE L1 -1 6999 6679 8 1362 2823 143 8 52 chr13 101875146 101875642 -18408670 + L1_Mur2 LINE L1 5211 5684 -193 8 1362 661 264 36 6 chr13 101875711 101875879 -18408433 - B3 SINE B2 -36 180 8 8 1362 180 0 0 0 chr13 101875882 101875902 -18408410 + (TG)n Simple_repeat Simple_repeat 2 21 0 8 1362 7382 85 7 6 chr13 101876091 101877083 -18407229 - L1_Mus4 LINE L1 -1 6635 5643 8 1362 261 258 99 22 chr13 101877261 101877352 -18406960 - L1M5 LINE L1 -501 5623 5526 8 1362 371 56 19 0 chr13 101878754 101878808 -18405504 + (TA)n Simple_repeat Simple_repeat 1 55 0 8 1362 191 36 36 0 chr13 101878840 101878868 -18405444 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 8 1362 414 0 0 0 chr13 101879552 101879598 -18404714 + (TG)n Simple_repeat Simple_repeat 2 47 0 8 1362 1272 272 40 27 chr13 101880143 101880547 -18403765 + Lx8 LINE L1 6340 6748 -725 8 1362 1013 233 52 56 chr13 101880547 101880815 -18403497 + ORR1D1 LTR MaLR 1 267 -107 8 1362 190 352 0 0 chr13 101881005 101881076 -18403236 + MIRb SINE MIR 16 86 -182 8 1362 2440 92 6 41 chr13 101882506 101882790 -18401522 + ORR1A2 LTR MaLR 1 280 -47 8 1362 1166 80 0 0 chr13 101882790 101882928 -18401384 + B1_Mus2 SINE Alu 1 138 -9 8 1362 453 19 0 0 chr13 101882928 101882982 -18401330 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 8 1362 2440 92 6 41 chr13 101882982 101883035 -18401277 + ORR1A2 LTR MaLR 281 326 -1 8 1362 525 58 0 0 chr13 101883379 101883448 -18400864 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 8 1362 252 0 0 0 chr13 101883541 101883569 -18400743 + (TG)n Simple_repeat Simple_repeat 1 28 0 8 1362 34 72 0 0 chr13 101884435 101884504 -18399808 + AT_rich Low_complexity Low_complexity 1 69 0 8 1362 334 329 91 14 chr13 101884678 101884897 -18399415 - L1M5 LINE L1 -1499 4647 4412 8 1362 291 114 0 0 chr13 101884933 101884977 -18399335 + (TCC)n Simple_repeat Simple_repeat 2 45 0 8 1362 435 321 0 0 chr13 101885727 101885839 -18398473 - PB1D10 SINE Alu -5 112 1 8 1362 455 271 72 56 chr13 101886723 101886848 -18397464 - RSINE1 SINE B4 -36 129 3 8 1362 226 242 15 75 chr13 101886991 101887058 -18397254 + MTE2b LTR MaLR 1 63 -316 8 1362 494 228 0 23 chr13 101887051 101887164 -18397148 + MTE2b LTR MaLR 263 370 -9 8 1362 1267 247 100 9 chr13 101887226 101887565 -18396747 - ORR1D2 LTR MaLR 0 370 1 8 1362 696 262 7 20 chr13 101888260 101888408 -18395904 + RSINE1 SINE B4 2 147 -18 8 1362 281 223 0 11 chr13 101888465 101888560 -18395752 + (TAA)n Simple_repeat Simple_repeat 1 94 0 8 1362 2044 110 47 0 chr13 101889880 101890199 -18394113 - Lx LINE L1 -4 6650 6317 8 1362 213 304 75 12 chr13 101890219 101890299 -18394013 - B1F SINE Alu -64 85 1 8 1362 447 63 0 0 chr13 101891129 101891192 -18393120 + (TG)n Simple_repeat Simple_repeat 1 63 0 8 1362 883 248 130 4 chr13 101891192 101891431 -18392881 - B4A SINE B4 -22 270 2 8 1362 3749 191 41 10 chr13 101891536 101892248 -18392064 - Lx5 LINE L1 0 7050 6317 8 1362 9500 186 43 20 chr13 101892248 101892448 -18391864 - Lx7 LINE L1 -22 7674 7454 8 1362 500 0 17 0 chr13 101892448 101892508 -18391804 + (CA)n Simple_repeat Simple_repeat 2 62 0 8 1362 9500 173 39 19 chr13 101892508 101895973 -18388339 - Lx7 LINE L1 -243 7453 3920 8 1362 275 191 15 0 chr13 101896013 101896081 -18388231 + CT-rich Low_complexity Low_complexity 1 69 0 9 1362 303 219 109 0 chr13 101896089 101896153 -18388159 - ID4_ SINE ID -11 72 2 9 1362 801 95 0 0 chr13 101896451 101896567 -18387745 + (CA)n Simple_repeat Simple_repeat 1 116 0 9 1362 276 358 159 5 chr13 101898225 101898433 -18385879 + LTR33 LTR ERVL 274 513 -2 9 1362 215 103 0 49 chr13 101899306 101899339 -18384973 + A-rich Low_complexity Low_complexity 1 32 0 9 1362 192 40 0 0 chr13 101899339 101899364 -18384948 + (CCAA)n Simple_repeat Simple_repeat 4 28 0 9 1362 189 302 157 16 chr13 101899847 101899968 -18384344 + MER5A DNA MER1_type 1 138 -51 9 1362 1159 68 0 7 chr13 101900145 101900293 -18384019 - B1_Mus1 SINE Alu 0 148 2 9 1362 207 0 0 0 chr13 101901571 101901594 -18382718 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 9 1362 7651 155 27 5 chr13 101901691 101903147 -18381165 - Lx5 LINE L1 -11 7039 5538 9 1362 1320 257 64 62 chr13 101903453 101903971 -18380341 - Lx8 LINE L1 -183 7290 6772 9 1362 921 242 31 44 chr13 101903970 101904290 -18380022 - Lx8 LINE L1 -813 6660 6345 9 1362 2128 96 4 64 chr13 101904291 101904634 -18379678 - ORR1A2 LTR MaLR -3 376 1 9 1362 883 338 25 78 chr13 101904648 101904912 -18379400 - Lx8 LINE L1 -1154 6319 6080 9 1362 1122 87 17 0 chr13 101904912 101905085 -18379227 + (TCC)n Simple_repeat Simple_repeat 3 178 0 9 1362 1417 286 58 28 chr13 101905085 101905909 -18378403 - Lx8 LINE L1 -1394 6079 5249 9 1362 227 347 33 46 chr13 101906261 101906412 -18377900 + L1MC3 LINE L1 224 372 -5673 9 1362 686 315 121 39 chr13 101906555 101907169 -18377143 + L1MC3 LINE L1 521 1184 -4861 9 1362 422 267 84 52 chr13 101907169 101907463 -18376849 - L1MCa LINE L1 -5016 1401 1019 9 1362 359 279 83 36 chr13 101907474 101907667 -18376645 + L1MC3 LINE L1 4874 5075 -1489 9 1362 864 284 79 54 chr13 101907744 101908741 -18375571 + L1MC3 LINE L1 5258 6277 -1926 9 1362 579 217 0 0 chr13 101908745 101908851 -18375461 - ID_B1 SINE B4 0 224 119 9 1362 221 261 154 0 chr13 101908793 101908858 -18375454 - PB1 SINE Alu -21 106 32 9 1362 367 136 17 0 chr13 101908893 101908952 -18375360 + URR1B DNA MER1_type 166 225 0 9 1362 470 297 73 45 chr13 101909045 101909359 -18374953 + L1MC3 LINE L1 6269 6591 -1612 9 1362 342 320 140 19 chr13 101909359 101909566 -18374746 + L1MC3 LINE L1 7050 7281 -922 9 1362 397 286 37 27 chr13 101909665 101909852 -18374460 + L1MC3 LINE L1 7278 7466 -737 9 1362 301 284 12 0 chr13 101909984 101910065 -18374247 + L1MC3 LINE L1 7801 7882 -321 9 1362 320 257 85 9 chr13 101910066 101910172 -18374140 + PB1D10 SINE Alu 1 114 -3 9 1362 304 270 72 0 chr13 101910172 101910283 -18374029 + L1MC3 LINE L1 7908 8026 -177 9 1362 26 30 0 0 chr13 101910609 101910642 -18373670 + AT_rich Low_complexity Low_complexity 1 33 0 9 1362 235 254 0 0 chr13 101910642 101910709 -18373603 - Lx7 LINE L1 -18 7678 7612 9 1362 329 306 36 54 chr13 101910904 101911125 -18373187 - L1MEd LINE L1 -5289 830 614 9 1362 207 250 0 0 chr13 101911240 101911308 -18373004 + (CA)n Simple_repeat Simple_repeat 2 69 0 9 1362 582 216 0 0 chr13 101911330 101911501 -18372811 + (CA)n Simple_repeat Simple_repeat 2 172 0 9 1362 205 312 12 24 chr13 101911880 101911962 -18372350 + L3 LINE CR1 4337 4417 -72 9 1362 218 303 0 15 chr13 101913135 101913202 -18371110 + GA-rich Low_complexity Low_complexity 2 67 0 9 1362 348 286 49 39 chr13 101913353 101913455 -18370857 - L2b LINE L2 -10 3365 3263 9 1362 196 205 0 43 chr13 101914663 101914709 -18369603 + L2c LINE L2 3033 3076 -311 9 1362 297 361 34 68 chr13 101914722 101914927 -18369385 + L2c LINE L2 3182 3379 -8 9 1362 5577 91 13 22 chr13 101915457 101916290 -18368022 - L1_Mus4 LINE L1 -28 6608 5783 9 1362 2317 68 22 3 chr13 101916286 101916609 -18367703 - L1_Mus1 LINE L1 0 6567 6239 9 1362 229 312 41 51 chr13 101916609 101916707 -18367605 - B2_Mm2 SINE B2 -93 102 6 9 1362 14533 129 9 20 chr13 101916707 101919063 -18365249 - L1_Mm LINE L1 -121 5762 3423 9 1362 6357 50 19 9 chr13 101919063 101919863 -18364449 - RLTR13C2 LTR ERVK 0 808 1 9 1362 14533 129 9 20 chr13 101919863 101920029 -18364283 - L1_Mm LINE L1 -2461 3422 3269 9 1362 832 197 11 11 chr13 101920966 101921146 -18363166 + B2_Mm2 SINE B2 2 181 -14 9 1362 5319 41 0 2 chr13 101921154 101921793 -18362519 - L1Md_F2 LINE L1 -19 6563 5926 9 1362 384 273 131 25 chr13 101921799 101922036 -18362276 - L1MB3 LINE L1 -79 6104 5843 9 1362 1173 86 0 0 chr13 101922876 101923039 -18361273 + (TTCTCC)n Simple_repeat Simple_repeat 6 168 0 9 1362 302 285 98 11 chr13 101923257 101923431 -18360881 - L1ME3A LINE L1 -198 5975 5787 9 1362 495 221 107 34 chr13 101923449 101923627 -18360685 - MER96B DNA hAT -179 238 48 9 1362 959 159 42 20 chr13 101923729 101923907 -18360405 + MTD LTR MaLR 13 178 -241 9 1362 233 260 12 49 chr13 101923915 101923996 -18360316 - L1ME3A LINE L1 -454 5719 5642 9 1362 561 302 76 26 chr13 101924564 101924985 -18359327 + L1MD LINE L1 4097 4538 -1608 9 1362 2267 188 37 7 chr13 101925071 101925536 -18358776 + Lx9 LINE L1 6710 7188 -456 9 1362 1665 224 63 9 chr13 101925589 101926018 -18358294 + Lx9 LINE L1 7172 7623 -21 9 1362 341 340 63 8 chr13 101926058 101926310 -18358002 + L1M5 LINE L1 4677 4942 -1198 9 1362 1112 267 165 41 chr13 101926432 101927160 -18357152 + L1MD3 LINE L1 7001 7847 -148 9 1362 1685 26 0 0 chr13 101927160 101927352 -18356960 - B2_Mm1a SINE B2 -1 192 1 9 1362 1112 267 165 41 chr13 101927352 101927501 -18356811 + L1MD3 LINE L1 7848 7987 -8 9 1362 473 231 39 77 chr13 101927778 101927933 -18356379 + Lx8 LINE L1 6936 7084 -389 9 1362 324 0 0 0 chr13 101927938 101927974 -18356338 + (CA)n Simple_repeat Simple_repeat 2 37 0 9 1362 496 338 7 34 chr13 101927996 101928143 -18356169 + RSINE1 SINE B4 6 148 -17 9 1362 354 338 99 19 chr13 101928504 101928866 -18355446 + L1M5 LINE L1 4807 5197 -949 9 1362 468 274 26 33 chr13 101928949 101929100 -18355212 + RSINE1 SINE B4 2 151 -14 9 1362 591 53 0 0 chr13 101929102 101929177 -18355135 + (CA)n Simple_repeat Simple_repeat 1 75 0 9 1362 420 137 27 0 chr13 101929204 101929277 -18355035 - B3A SINE B2 -123 75 1 9 1362 882 246 17 55 chr13 101929277 101929515 -18354797 - B4A SINE B4 -65 227 1 9 1362 206 214 0 0 chr13 101930224 101930266 -18354046 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 1362 807 243 16 33 chr13 101930268 101930424 -18353888 - B3A SINE B2 -10 188 32 9 1362 302 0 26 0 chr13 101930424 101930462 -18353850 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 9 1362 1172 56 7 0 chr13 101930462 101930605 -18353707 - B1_Mus1 SINE Alu -1 147 4 9 1362 807 243 16 33 chr13 101930605 101930630 -18353682 - B3A SINE B2 -167 31 10 9 1362 1427 163 8 4 chr13 101930682 101930916 -18353396 + ORR1C1 LTR MaLR 93 327 -51 9 1362 479 363 45 22 chr13 101930942 101931255 -18353057 - L1MC3 LINE L1 -738 7047 6728 9 1362 194 0 39 0 chr13 101931310 101931336 -18352976 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 9 1362 183 156 0 0 chr13 101932284 101932316 -18351996 + CT-rich Low_complexity Low_complexity 3 34 0 9 1362 185 94 0 30 chr13 101933186 101933219 -18351093 + (GA)n Simple_repeat Simple_repeat 1 32 0 9 1362 234 290 19 29 chr13 101933804 101933907 -18350405 + Lx8 LINE L1 7069 7170 -303 9 1362 316 72 18 18 chr13 101934386 101934443 -18349869 + (CAA)n Simple_repeat Simple_repeat 2 58 0 9 1362 204 403 0 0 chr13 101934834 101934911 -18349401 - L3 LINE CR1 -250 4239 4163 9 1362 22 0 0 0 chr13 101935154 101935176 -18349136 + AT_rich Low_complexity Low_complexity 1 22 0 9 1362 965 224 4 65 chr13 101935907 101936169 -18348143 + Lx9 LINE L1 7008 7253 -391 9 1362 1185 214 0 10 chr13 101936535 101936743 -18347569 - B3 SINE B2 -7 209 4 9 1362 898 158 139 58 chr13 101936990 101937103 -18347209 + URR1A DNA MER1_type 2 141 -85 9 1362 2018 142 22 30 chr13 101937103 101937465 -18346847 + RLTR15 LTR ERVK 1 359 0 9 1362 898 158 139 58 chr13 101937465 101937559 -18346753 + URR1A DNA MER1_type 142 226 0 9 1362 473 287 93 43 chr13 101937867 101938070 -18346242 - MLT1J2 LTR MaLR -9 439 199 9 1362 761 103 8 0 chr13 101938070 101938187 -18346125 + (TC)n Simple_repeat Simple_repeat 1 118 0 9 1362 334 336 79 63 chr13 101938187 101938258 -18346054 - MLT1J2 LTR MaLR -213 198 118 9 1362 261 376 95 27 chr13 101938441 101938703 -18345609 - B4A SINE B4 -12 280 1 9 1362 349 259 147 0 chr13 101939179 101939295 -18345017 + MamGypLTR1d LTR Gypsy 663 795 -18 9 1362 1072 214 5 15 chr13 101939578 101939782 -18344530 - B3 SINE B2 -1 215 14 9 1362 1086 96 0 0 chr13 101939973 101940130 -18344182 + (TTTC)n Simple_repeat Simple_repeat 4 160 0 9 1362 683 124 0 9 chr13 101940130 101940244 -18344068 + (TCCC)n Simple_repeat Simple_repeat 3 115 0 9 1362 865 201 0 0 chr13 101940251 101940400 -18343912 - B1_Mur4 SINE Alu -1 149 1 9 1362 301 362 70 70 chr13 101940438 101940797 -18343515 + LTR88c LTR Genie? 62 420 -442 9 1362 330 26 0 0 chr13 101941599 101941638 -18342674 + (TG)n Simple_repeat Simple_repeat 2 40 0 9 1362 780 115 0 0 chr13 101943409 101943531 -18340781 + (GGA)n Simple_repeat Simple_repeat 2 123 0 9 1362 484 286 30 114 chr13 101943615 101943781 -18340531 - B4 SINE B4 -139 153 2 9 1362 207 0 0 0 chr13 101944682 101944705 -18339607 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 9 1362 218 328 52 37 chr13 101945479 101945615 -18338697 - L2a LINE L2 -1 3425 3288 9 1362 210 305 31 21 chr13 101945854 101945951 -18338361 - MIRm SINE MIR -129 147 50 9 1362 486 149 0 0 chr13 101946578 101946665 -18337647 + (TG)n Simple_repeat Simple_repeat 2 88 0 9 1362 291 289 25 57 chr13 101947422 101947580 -18336732 - L1MA4 LINE L1 -396 5904 5752 9 1362 411 263 195 12 chr13 101947612 101947858 -18336454 - L1_Rod LINE L1 -246 5601 5311 9 1362 877 42 0 17 chr13 101948025 101948145 -18336167 + (TTTC)n Simple_repeat Simple_repeat 3 120 0 9 1362 992 252 44 4 chr13 101948202 101948453 -18335859 - Lx6 LINE L1 -19 7441 7181 9 1362 579 283 0 21 chr13 101948458 101948599 -18335713 - Lx5 LINE L1 -318 6732 6595 9 1362 766 263 0 39 chr13 101948858 101949064 -18335248 - B3A SINE B2 0 198 1 9 1362 4446 56 10 31 chr13 101949074 101949662 -18334650 - L1_Mus2 LINE L1 -1 6565 5990 9 1362 431 0 0 36 chr13 101949837 101949893 -18334419 + (TAA)n Simple_repeat Simple_repeat 2 55 0 9 1362 839 188 376 11 chr13 101950435 101950709 -18333603 - ORR1D1 LTR MaLR 0 374 1 9 1362 360 0 0 0 chr13 101951439 101951479 -18332833 + (TG)n Simple_repeat Simple_repeat 2 41 0 9 1362 946 222 176 7 chr13 101952228 101952548 -18331764 + MTEb LTR MaLR 1 374 -5 9 1362 180 0 0 0 chr13 101953176 101953196 -18331116 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 9 1362 3694 132 47 26 chr13 101953370 101953645 -18330667 - RMER6A LTR ERVK -43 713 449 9 1362 2251 194 35 63 chr13 101953645 101954246 -18330066 + RLTR31A_Mm LTR ERVK 1 584 0 9 1362 3694 132 47 26 chr13 101954246 101954668 -18329644 - RMER6A LTR ERVK -308 448 1 9 1362 435 346 32 27 chr13 101955967 101956187 -18328125 + MIRb SINE MIR 5 225 -43 9 1362 2194 99 9 6 chr13 101956998 101957322 -18326990 + L1_Mus3 LINE L1 6309 6633 -5 1 1362 213 308 66 19 chr13 101957332 101957438 -18326874 - MIR SINE MIR -95 167 57 1 1362 3176 89 8 2 chr13 101957455 101958027 -18326285 + Lx LINE L1 5436 6008 -646 1 1362 2439 112 57 32 chr13 101958027 101958441 -18325871 + Lx LINE L1 6203 6630 -24 1 1362 393 22 0 0 chr13 101958441 101958487 -18325825 + (GAAA)n Simple_repeat Simple_repeat 4 49 0 1 1362 2439 112 57 32 chr13 101958487 101958513 -18325799 + Lx LINE L1 6631 6654 0 1 1362 180 0 0 0 chr13 101958594 101958614 -18325698 + (TTTA)n Simple_repeat Simple_repeat 4 23 0 1 1362 247 257 37 73 chr13 101959458 101959567 -18324745 - LTR50 LTR ERVL -326 469 365 1 1362 332 199 233 15 chr13 101959692 101959825 -18324487 - LTR50 LTR ERVL -628 167 6 1 1362 375 169 0 0 chr13 101959962 101960033 -18324279 + (TGG)n Simple_repeat Simple_repeat 1 71 0 1 1362 321 252 30 20 chr13 101961316 101961417 -18322895 + Lx5 LINE L1 6648 6749 -711 1 1362 201 139 0 0 chr13 101961417 101961460 -18322852 + (CCAA)n Simple_repeat Simple_repeat 4 46 0 1 1362 612 260 35 0 chr13 101961462 101961635 -18322677 + Lx5 LINE L1 6455 6622 -428 1 1362 3148 143 113 63 chr13 101961685 101962402 -18321910 + MTB-int LTR MaLR 506 1258 0 1 1362 1416 31 26 0 chr13 101962402 101962593 -18321719 + MTB LTR MaLR 1 196 -204 1 1362 3074 73 29 33 chr13 101962593 101963046 -18321266 - Lx3_Mus LINE L1 -736 6273 5823 1 1362 5553 70 17 0 chr13 101963047 101963760 -18320552 + Lx3_Mus LINE L1 6277 7001 -8 1 1362 1605 64 0 0 chr13 101963788 101964007 -18320305 + MTB LTR MaLR 182 400 0 1 1362 183 162 0 0 chr13 101964010 101964047 -18320265 + (TGGA)n Simple_repeat Simple_repeat 2 38 0 1 1362 216 0 0 0 chr13 101965331 101965355 -18318957 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1362 301 241 72 27 chr13 101965559 101965670 -18318642 + PB1D10 SINE Alu 1 116 -1 1 1362 24 53 0 0 chr13 101965972 101966010 -18318302 + AT_rich Low_complexity Low_complexity 1 38 0 1 1362 782 302 26 4 chr13 101966315 101966584 -18317728 - B4A SINE B4 -17 275 1 1 1362 21 36 0 0 chr13 101966865 101966893 -18317419 + AT_rich Low_complexity Low_complexity 1 28 0 1 1362 469 264 80 0 chr13 101966903 101967028 -18317284 + B1F SINE Alu 6 140 -9 1 1362 456 223 65 102 chr13 101967670 101967914 -18316398 + L1MB3 LINE L1 5775 6024 -144 1 1362 1266 205 88 29 chr13 101970473 101970772 -18313540 + MTEb LTR MaLR 9 333 -46 1 1362 1276 198 166 3 chr13 101970772 101971091 -18313221 - ORR1D1 LTR MaLR -2 372 2 1 1362 1266 205 88 29 chr13 101971091 101971132 -18313180 + MTEb LTR MaLR 334 369 -10 1 1362 29 28 0 0 chr13 101971170 101971206 -18313106 + AT_rich Low_complexity Low_complexity 1 36 0 1 1362 200 238 0 0 chr13 101971450 101971492 -18312820 + A-rich Low_complexity Low_complexity 1 42 0 1 1362 711 294 94 37 chr13 101971555 101972011 -18312301 - Charlie4a DNA MER1_type -6 502 21 1 1363 1323 173 4 26 chr13 101974205 101974436 -18309876 - URR1A DNA MER1_type 0 226 1 1 1363 439 329 14 42 chr13 101975069 101975212 -18309100 - RSINE1 SINE B4 -2 163 25 1 1363 232 291 73 98 chr13 101975215 101975379 -18308933 - L1MEb LINE L1 -5362 838 679 1 1363 241 288 94 56 chr13 101975416 101975596 -18308716 - L1MEb LINE L1 -5498 596 410 1 1363 957 234 126 47 chr13 101977127 101977572 -18306740 - L1MA6 LINE L1 -1 6299 5820 1 1363 282 29 0 0 chr13 101977572 101977607 -18306705 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1363 643 271 35 4 chr13 101977673 101977922 -18306390 - B4A SINE B4 -2 290 6 1 1363 288 258 0 0 chr13 101977952 101978018 -18306294 - L1M3 LINE L1 -406 5777 5712 1 1363 360 200 0 0 chr13 101978226 101978301 -18306011 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 1363 3827 162 77 54 chr13 101979738 101980608 -18303704 + RMER19B LTR ERVK 1 890 -12 1 1363 555 66 0 0 chr13 101981154 101981230 -18303082 + (TC)n Simple_repeat Simple_repeat 1 76 0 1 1363 897 157 0 7 chr13 101981236 101981377 -18302935 - B1_Mus2 SINE Alu -6 141 2 1 1363 279 129 141 14 chr13 101981412 101981483 -18302829 - Lx5 LINE L1 -3 7047 6968 1 1363 542 200 49 43 chr13 101981484 101981646 -18302666 + Lx5 LINE L1 5978 6140 -910 1 1363 665 155 9 0 chr13 101981671 101981787 -18302525 - URR1B DNA MER1_type 0 225 109 1 1363 28 0 0 0 chr13 101983475 101983503 -18300809 + AT_rich Low_complexity Low_complexity 1 28 0 1 1363 234 0 0 0 chr13 101983916 101983942 -18300370 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1363 1177 141 109 15 chr13 101983974 101984176 -18300136 - URR1B DNA MER1_type 0 225 5 1 1363 934 193 102 117 chr13 101984464 101984868 -18299444 + MT2A LTR ERVL 1 539 -62 1 1363 300 53 0 0 chr13 101984896 101984934 -18299378 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1363 310 135 0 63 chr13 101985026 101985105 -18299207 + MLT2B5 LTR ERVL 478 551 -4 1 1363 232 237 17 0 chr13 101986819 101986878 -18297434 + MIR SINE MIR 82 141 -67 1 1363 419 272 311 41 chr13 101987441 101987712 -18296600 + MLT1A0 LTR MaLR 46 389 -19 1 1363 432 0 0 0 chr13 101987985 101988033 -18296279 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1363 33 0 0 0 chr13 101988677 101988710 -18295602 + AT_rich Low_complexity Low_complexity 1 33 0 1 1363 223 336 16 16 chr13 101988791 101988912 -18295400 + MIR SINE MIR 49 169 -93 1 1363 189 147 0 0 chr13 101989881 101989915 -18294397 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1363 203 237 40 30 chr13 101989969 101990069 -18294243 + (CA)n Simple_repeat Simple_repeat 1 101 0 1 1363 206 206 54 14 chr13 101989989 101990063 -18294249 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 1 1363 297 0 0 0 chr13 101990069 101990102 -18294210 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1363 2063 297 76 38 chr13 101992552 101993406 -18290906 - Lx8 LINE L1 -72 7401 6515 1 1363 339 311 107 98 chr13 101994050 101994367 -18289945 - MLT1A0 LTR MaLR -45 320 1 1 1363 1503 148 160 129 chr13 101994582 101994938 -18289374 + ORR1B2 LTR MaLR 1 367 0 1 1363 299 29 0 0 chr13 101995722 101995757 -18288555 + (TTTTC)n Simple_repeat Simple_repeat 5 39 0 1 1363 365 102 0 17 chr13 101995757 101995806 -18288506 + (TCCCC)n Simple_repeat Simple_repeat 3 51 0 1 1363 1294 46 17 0 chr13 101995806 101995979 -18288333 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 1 1363 365 102 0 17 chr13 101995979 101995989 -18288323 + (TCCCC)n Simple_repeat Simple_repeat 3 12 0 1 1363 216 158 0 0 chr13 101995980 101996018 -18288294 + CT-rich Low_complexity Low_complexity 4 41 0 1 1363 938 287 91 94 chr13 101997197 101997716 -18286596 - MT2A LTR ERVL 0 533 17 1 1363 571 250 44 19 chr13 101997941 101998100 -18286212 - RSINE1 SINE B4 -1 164 2 1 1363 496 320 41 55 chr13 101998102 101998393 -18285919 + ORR1E LTR MaLR 32 318 -41 1 1363 315 272 132 68 chr13 102000029 102000309 -18284003 - MLT1J1 LTR MaLR -146 298 1 1 1363 484 229 38 0 chr13 102000432 102000537 -18283775 - PB1D10 SINE Alu -8 109 1 2 1363 220 178 54 14 chr13 102001187 102001261 -18283051 + A-rich Low_complexity Low_complexity 1 77 0 3 1363 216 0 0 0 chr13 102002441 102002465 -18281847 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1363 180 0 0 0 chr13 102004397 102004417 -18279895 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 1363 525 239 167 6 chr13 102004477 102004633 -18279679 - URR1B DNA MER1_type 0 225 45 6 1363 253 303 115 6 chr13 102005029 102005185 -18279127 - MIRb SINE MIR -16 252 80 7 1363 23 0 0 0 chr13 102005891 102005914 -18278398 + AT_rich Low_complexity Low_complexity 1 23 0 8 1363 478 277 14 28 chr13 102006009 102006144 -18278168 + B1F SINE Alu 3 136 -13 9 1363 297 0 0 0 chr13 102006144 102006177 -18278135 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1 1363 350 314 93 39 chr13 102007103 102007232 -18277080 + L2b LINE L2 3237 3372 -3 1 1363 225 291 0 0 chr13 102009487 102009542 -18274770 + CT-rich Low_complexity Low_complexity 1 55 0 1 1363 369 0 0 0 chr13 102010833 102010874 -18273438 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1363 400 283 121 75 chr13 102011382 102011581 -18272731 + Helitron3Na_Mam RC Helitron 29 236 -250 1 1363 300 27 0 0 chr13 102012401 102012438 -18271874 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1363 198 284 148 0 chr13 102012631 102012719 -18271593 - MIR SINE MIR -33 229 129 1 1363 2168 82 14 3 chr13 102012867 102013149 -18271163 + L1_Mus1 LINE L1 6282 6566 -1 1 1363 239 252 126 39 chr13 102014052 102014155 -18270157 + MLT1K LTR MaLR 384 495 -100 1 1363 731 289 37 120 chr13 102015721 102016103 -18268209 - ORR1E LTR MaLR -6 353 4 1 1363 189 0 0 0 chr13 102016944 102016965 -18267347 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 2 1363 21 36 0 0 chr13 102017447 102017475 -18266837 + AT_rich Low_complexity Low_complexity 1 28 0 2 1363 668 288 140 30 chr13 102017668 102018004 -18266308 + MLT1B LTR MaLR 18 390 0 2 1363 1953 223 15 10 chr13 102018395 102018798 -18265514 + MTD LTR MaLR 1 405 -14 2 1363 2086 168 23 9 chr13 102020549 102020891 -18263421 - MTC LTR MaLR -74 347 1 2 1363 465 66 0 0 chr13 102021040 102021101 -18263211 + (TATG)n Simple_repeat Simple_repeat 1 61 0 2 1363 1876 200 56 58 chr13 102021385 102021900 -18262412 - Lx7 LINE L1 0 7696 7183 2 1363 368 100 182 91 chr13 102021904 102022014 -18262298 + BC1_Mm scRNA scRNA 10 129 -23 2 1363 1656 208 40 14 chr13 102024901 102025248 -18259064 - Lx2B LINE L1 -3 6997 6642 2 1363 406 305 176 26 chr13 102025246 102025559 -18258753 - Lx8 LINE L1 -218 7255 6896 2 1363 860 300 165 26 chr13 102025561 102025656 -18258656 + Lx7 LINE L1 5817 5912 -1561 3 1363 315 49 0 0 chr13 102025656 102025697 -18258615 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1363 1905 301 122 28 chr13 102025697 102026556 -18257756 + Lx7 LINE L1 5913 6854 -842 3 1363 889 192 0 0 chr13 102026866 102027012 -18257300 - B1_Mus2 SINE Alu -1 146 1 3 1363 234 0 0 0 chr13 102027310 102027336 -18256976 + (TG)n Simple_repeat Simple_repeat 1 26 0 3 1363 507 17 0 0 chr13 102027336 102027395 -18256917 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1363 307 271 121 62 chr13 102027610 102027866 -18256446 + L1MEd LINE L1 984 1254 -4865 3 1363 653 221 56 14 chr13 102027985 102028127 -18256185 + RSINE1 SINE B4 4 151 -14 3 1363 2223 263 64 58 chr13 102028321 102029035 -18255277 - Lx8 LINE L1 -590 6883 6161 2 1363 387 0 0 0 chr13 102029035 102029078 -18255234 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1363 2223 263 64 58 chr13 102029078 102029157 -18255155 - Lx8 LINE L1 -1313 6160 6085 2 1363 4256 260 60 83 chr13 102029220 102030657 -18253655 - Lx5 LINE L1 -8 7042 5639 3 1363 749 140 106 19 chr13 102030978 102031135 -18253177 + Lx4A LINE L1 5654 5848 -308 3 1363 236 333 109 33 chr13 102031790 102032156 -18252156 + L1M5 LINE L1 4518 4911 -1235 4 1363 21 57 0 0 chr13 102032173 102032208 -18252104 + AT_rich Low_complexity Low_complexity 1 35 0 4 1363 941 190 26 265 chr13 102032571 102032799 -18251513 + L1_Mur2 LINE L1 850 1071 -6015 4 1363 576 56 67 0 chr13 102032799 102032889 -18251423 + L1Md_F3 LINE L1 6475 6570 -14 4 1363 941 190 26 265 chr13 102032889 102033175 -18251137 + L1_Mur2 LINE L1 1072 1269 -5817 4 1363 1163 83 0 14 chr13 102033175 102033322 -18250990 + B1_Mus2 SINE Alu 1 145 -2 4 1363 189 0 0 0 chr13 102033323 102033344 -18250968 + (CAAA)n Simple_repeat Simple_repeat 3 23 0 4 1363 9889 155 81 31 chr13 102033344 102034206 -18250106 + L1_Mur2 LINE L1 1228 2060 -3817 4 1363 342 0 0 0 chr13 102034206 102034244 -18250068 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1363 9889 154 82 26 chr13 102034244 102035306 -18249006 + L1_Mur2 LINE L1 2061 3201 -2676 4 1363 441 0 0 0 chr13 102035306 102035355 -18248957 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1363 9889 154 82 26 chr13 102035355 102035478 -18248834 + L1_Mur2 LINE L1 3202 3371 -2506 4 1363 3232 203 18 10 chr13 102035479 102036091 -18248221 + Lx5 LINE L1 6431 7047 -3 4 1363 809 30 0 0 chr13 102036205 102036305 -18248007 + L1_Mus2 LINE L1 6467 6566 0 4 1363 438 139 0 0 chr13 102036545 102036617 -18247695 + (CATATA)n Simple_repeat Simple_repeat 2 73 0 5 1363 222 118 0 0 chr13 102036667 102036701 -18247611 + (TA)n Simple_repeat Simple_repeat 1 34 0 5 1363 779 231 0 27 chr13 102036845 102036992 -18247320 + RSINE1 SINE B4 8 150 -15 5 1363 26 30 0 0 chr13 102036999 102037032 -18247280 + AT_rich Low_complexity Low_complexity 1 33 0 5 1363 705 290 37 34 chr13 102037038 102037281 -18247031 + B4A SINE B4 1 240 -52 5 1363 205 372 23 0 chr13 102037864 102037950 -18246362 - MIR3 SINE MIR -54 154 67 5 1363 534 67 0 0 chr13 102038054 102038129 -18246183 + (TTCC)n Simple_repeat Simple_repeat 1 75 0 5 1363 442 379 9 28 chr13 102038487 102038704 -18245608 - MIRb SINE MIR -3 265 53 5 1363 1928 141 23 106 chr13 102038714 102039102 -18245210 - ORR1B1 LTR MaLR 0 394 39 5 1363 284 321 140 60 chr13 102039630 102039952 -18244360 - MLT1K LTR MaLR -61 534 195 5 1363 437 98 0 0 chr13 102039975 102040036 -18244276 - RLTR10E LTR ERVK 0 311 251 6 1363 202 146 24 0 chr13 102041900 102041941 -18242371 + A-rich Low_complexity Low_complexity 4 45 0 6 1363 925 259 139 7 chr13 102042707 102043002 -18241310 - MER2 DNA MER2_type -1 344 11 6 1363 214 333 56 19 chr13 102043150 102043257 -18241055 + L2c LINE L2 3277 3387 0 6 1363 180 0 0 0 chr13 102043280 102043300 -18241012 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 6 1363 193 235 39 0 chr13 102044005 102044056 -18240256 + L2c LINE L2 3374 3426 0 6 1363 810 113 0 0 chr13 102045188 102045312 -18239000 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 6 1363 1288 62 0 0 chr13 102045318 102045463 -18238849 - B1_Mus1 SINE Alu -2 146 2 6 1363 556 340 0 0 chr13 102046016 102046163 -18238149 + RSINE1 SINE B4 3 149 -16 6 1363 351 0 0 0 chr13 102046183 102046222 -18238090 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1363 35 0 0 0 chr13 102048684 102048719 -18235593 + AT_rich Low_complexity Low_complexity 1 35 0 6 1363 1539 269 23 9 chr13 102048938 102049006 -18235306 - MTEa LTR MaLR -26 353 285 7 1363 1766 208 56 17 chr13 102049006 102049363 -18234949 - ORR1D1 LTR MaLR -3 371 1 7 1363 1539 269 23 9 chr13 102049363 102049642 -18234670 - MTEa LTR MaLR -95 284 1 7 1363 3793 275 67 34 chr13 102049984 102051336 -18232976 + Lx9 LINE L1 6126 7521 -123 7 1363 355 196 77 132 chr13 102051380 102051615 -18232697 + Lx9 LINE L1 7419 7640 -4 7 1363 970 285 76 6 chr13 102051787 102052011 -18232301 - MLT1A0 LTR MaLR 0 365 134 7 1363 3236 29 0 0 chr13 102052011 102052357 -18231955 - ORR1A1 LTR MaLR 0 346 1 7 1363 970 285 76 6 chr13 102052357 102052446 -18231866 - MLT1A0 LTR MaLR -232 133 31 7 1363 2574 83 3 58 chr13 102052797 102053143 -18231169 - ORR1A2 LTR MaLR 0 327 1 7 1363 1346 252 88 9 chr13 102053238 102053670 -18230642 - L1MB5 LINE L1 -176 5998 5533 7 1363 290 298 39 31 chr13 102054518 102054646 -18229666 - MER20 DNA MER1_type 0 219 91 7 1363 217 217 65 0 chr13 102054883 102054929 -18229383 - L2a LINE L2 -83 3343 3295 7 1363 262 305 150 35 chr13 102055389 102055562 -18228750 - MIRb SINE MIR -41 227 35 8 1363 722 50 10 0 chr13 102057456 102057555 -18226757 + (GA)n Simple_repeat Simple_repeat 1 100 0 8 1363 425 365 104 47 chr13 102058200 102058692 -18225620 - LTR33A LTR ERVL 0 520 1 8 1363 813 241 23 6 chr13 102059018 102059030 -18225282 - B3 SINE B2 -38 178 166 8 1363 555 90 0 0 chr13 102059030 102059108 -18225204 + (TG)n Simple_repeat Simple_repeat 2 79 0 8 1363 813 241 23 6 chr13 102059108 102059266 -18225046 - B3 SINE B2 -51 165 5 8 1363 1446 150 27 0 chr13 102059283 102059503 -18224809 - URR1A DNA MER1_type 0 226 1 8 1363 23 33 0 0 chr13 102061298 102061328 -18222984 + AT_rich Low_complexity Low_complexity 1 30 0 8 1363 3183 108 56 74 chr13 102061329 102061882 -18222430 - Lx3C LINE L1 -2 6974 6432 8 1363 248 230 16 47 chr13 102061884 102061948 -18222364 + URR1A DNA MER1_type 26 87 -139 8 1363 736 157 7 54 chr13 102061943 102062091 -18222221 - URR1A DNA MER1_type -7 219 79 8 1363 839 59 0 8 chr13 102062437 102062556 -18221756 + (TTTTC)n Simple_repeat Simple_repeat 2 119 0 9 1363 197 274 48 0 chr13 102062666 102062728 -18221584 + MIRb SINE MIR 21 85 -183 9 1363 253 344 122 27 chr13 102062843 102062910 -18221402 + L2c LINE L2 2940 3010 -365 9 1363 1137 169 59 32 chr13 102062910 102063130 -18221182 + URR1A DNA MER1_type 1 226 0 9 1363 302 324 60 35 chr13 102063130 102063304 -18221008 + L2c LINE L2 3011 3206 -181 9 1363 188 259 49 49 chr13 102063622 102063683 -18220629 + MER5B DNA MER1_type 117 177 -1 9 1363 1084 275 30 32 chr13 102064391 102064729 -18219583 + MER58B DNA MER1_type 1 337 -4 9 1363 386 326 109 26 chr13 102064875 102065067 -18219245 - LTR33 LTR ERVL -6 509 302 9 1363 264 297 47 169 chr13 102065212 102065363 -18218949 - L3 LINE CR1 -3431 1058 924 9 1363 1214 68 0 7 chr13 102065363 102065512 -18218800 - B1_Mus1 SINE Alu 0 148 1 9 1363 264 297 47 169 chr13 102065512 102065680 -18218632 - L3 LINE CR1 -3566 923 778 9 1363 276 207 69 43 chr13 102065916 102066032 -18218280 - Looper DNA PiggyBac -70 1488 1370 9 1363 507 232 10 0 chr13 102066073 102066172 -18218140 - RSINE1 SINE B4 -24 141 42 1 1363 28 0 0 0 chr13 102066194 102066222 -18218090 + AT_rich Low_complexity Low_complexity 1 28 0 1 1363 365 261 72 36 chr13 102066313 102066452 -18217860 - Looper DNA PiggyBac -182 1376 1233 9 1363 666 70 3 1 chr13 102066459 102066550 -18217762 - L1_Mm LINE L1 -3695 2445 2325 1 1363 12203 57 23 1 chr13 102066546 102068098 -18216214 + L1Md_F2 LINE L1 4002 5586 -297 1 1363 8194 57 12 8 chr13 102068099 102069121 -18215191 + L1Md_F2 LINE L1 5588 6582 0 1 1363 1110 277 124 34 chr13 102069122 102069895 -18214417 - Looper DNA PiggyBac -385 1173 279 9 1363 363 195 17 8 chr13 102070412 102070531 -18213781 + CT-rich Low_complexity Low_complexity 1 120 0 1 1363 327 154 0 0 chr13 102070636 102070701 -18213611 + (CAA)n Simple_repeat Simple_repeat 2 66 0 1 1363 307 248 137 0 chr13 102070739 102070856 -18213456 - Lx7 LINE L1 -334 7362 7230 1 1363 377 244 175 64 chr13 102070866 102071037 -18213275 + Lx7 LINE L1 6917 7106 -590 1 1363 216 0 0 0 chr13 102073238 102073262 -18211050 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1363 225 0 0 0 chr13 102073262 102073286 -18211026 + (CCA)n Simple_repeat Simple_repeat 1 25 0 1 1363 197 132 0 26 chr13 102073951 102073990 -18210322 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 1 1363 1257 126 8 6 chr13 102073999 102074201 -18210111 - B2_Mm2 SINE B2 -8 208 4 1 1363 209 255 0 0 chr13 102074518 102074569 -18209743 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1363 1195 35 0 0 chr13 102074760 102074901 -18209411 + L1_Mus2 LINE L1 6426 6566 0 1 1363 869 180 147 81 chr13 102076613 102076824 -18207488 - URR1B DNA MER1_type 0 225 1 1 1363 7837 48 32 5 chr13 102077768 102078786 -18205526 - L1_Mus1 LINE L1 0 6567 5522 1 1363 282 316 81 22 chr13 102080270 102080406 -18203906 + MIRc SINE MIR 110 253 -15 1 1363 21 0 0 0 chr13 102080844 102080865 -18203447 + AT_rich Low_complexity Low_complexity 1 21 0 1 1363 255 61 0 0 chr13 102080879 102080912 -18203400 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 1363 671 46 45 18 chr13 102081584 102081695 -18202617 + (GAAAA)n Simple_repeat Simple_repeat 3 116 0 1 1363 513 0 0 0 chr13 102083605 102083662 -18200650 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1363 205 211 14 40 chr13 102083965 102084039 -18200273 + (TA)n Simple_repeat Simple_repeat 2 73 0 1 1363 189 0 0 0 chr13 102084039 102084060 -18200252 + (CA)n Simple_repeat Simple_repeat 2 22 0 1 1363 255 31 0 0 chr13 102084673 102084705 -18199607 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1 1363 24 32 0 0 chr13 102087550 102087581 -18196731 + AT_rich Low_complexity Low_complexity 1 31 0 1 1363 223 275 106 71 chr13 102087824 102087923 -18196389 + B1F SINE Alu 7 115 -2 1 1363 222 175 104 0 chr13 102087925 102087970 -18196342 + B1_Mur4 SINE Alu 1 52 -98 1 1363 24 67 0 0 chr13 102087987 102088032 -18196280 + GC_rich Low_complexity Low_complexity 1 45 0 1 1363 646 104 19 9 chr13 102088038 102088145 -18196167 + B1_Mus2 SINE Alu 39 146 -1 1 1363 891 257 68 115 chr13 102088815 102089180 -18195132 - MTE2b LTR MaLR 0 379 32 1 1363 1075 291 31 28 chr13 102090563 102090917 -18193395 + ORR1E LTR MaLR 1 355 -4 1 1363 195 42 0 0 chr13 102091802 102091826 -18192486 + (CATTA)n Simple_repeat Simple_repeat 2 25 0 1 1363 275 77 41 62 chr13 102094109 102094206 -18190106 + (CAAA)n Simple_repeat Simple_repeat 2 96 0 1 1363 408 155 0 0 chr13 102094618 102094689 -18189623 + (TA)n Simple_repeat Simple_repeat 1 71 0 1 1363 2514 271 62 53 chr13 102095158 102096343 -18187969 + L1MC1 LINE L1 2902 4124 -2022 1 1363 1380 258 109 14 chr13 102096321 102096805 -18187507 + L1MC1 LINE L1 4376 4905 -1241 1 1363 553 343 86 47 chr13 102096850 102097128 -18187184 - B4A SINE B4 -2 290 2 1 1363 816 141 0 0 chr13 102097146 102097281 -18187031 + (TCC)n Simple_repeat Simple_repeat 1 135 0 1 1363 1317 78 0 0 chr13 102097281 102097460 -18186852 + (TTC)n Simple_repeat Simple_repeat 1 179 0 1 1363 2688 275 71 17 chr13 102097522 102098880 -18185432 + L1MC1 LINE L1 4905 6333 0 1 1363 502 325 124 16 chr13 102098923 102099629 -18184683 + L1MD3 LINE L1 6961 7885 -110 1 1363 186 133 0 0 chr13 102100813 102100843 -18183469 + (CAT)n Simple_repeat Simple_repeat 3 32 0 1 1363 2674 137 4 30 chr13 102100881 102101340 -18182972 + RLTR11B LTR ERVK 7 453 0 1 1363 514 245 34 13 chr13 102101341 102101490 -18182822 - Lx9 LINE L1 -162 7482 7331 1 1363 406 217 16 80 chr13 102101488 102101613 -18182699 + Lx9 LINE L1 7173 7289 -355 1 1363 381 255 164 28 chr13 102101908 102102122 -18182190 - Lx8 LINE L1 0 7473 7231 1 1363 303 267 150 36 chr13 102102363 102102503 -18181809 - L1MEf LINE L1 -4034 2166 2011 1 1363 295 250 133 33 chr13 102102558 102102678 -18181634 - L1MEf LINE L1 -4304 1896 1765 1 1363 372 335 5 108 chr13 102102788 102102982 -18181330 - B3A SINE B2 0 198 25 1 1363 335 321 100 6 chr13 102102982 102103142 -18181170 - L1MEf LINE L1 -4549 1651 1477 1 1363 318 268 120 60 chr13 102103127 102103294 -18181018 - L1MEf LINE L1 -4629 1571 1395 1 1363 296 158 35 0 chr13 102103337 102103394 -18180918 - B1_Mm SINE Alu 0 147 89 1 1363 340 317 128 23 chr13 102103477 102103575 -18180737 - L1MEf LINE L1 -4964 1236 1126 1 1363 1389 47 94 0 chr13 102103575 102103746 -18180566 + B2_Mm2 SINE B2 1 187 -8 1 1363 340 317 128 23 chr13 102103746 102104044 -18180268 - L1MEf LINE L1 -5075 1125 799 1 1363 384 255 164 28 chr13 102104046 102104260 -18180052 + Lx8 LINE L1 7231 7473 0 1 1363 528 16 0 0 chr13 102104449 102104510 -18179802 + (TC)n Simple_repeat Simple_repeat 2 62 0 1 1363 418 337 45 82 chr13 102104510 102104730 -18179582 - B4A SINE B4 -76 216 5 1 170 296 331 79 83 chr13 102104737 102105169 -18179143 - L1MEf LINE L1 -5452 642 205 1 1364 1165 43 14 28 chr13 102105169 102105304 -18179008 + B1_Mus2 SINE Alu 1 136 -11 1 1364 207 0 0 0 chr13 102105304 102105327 -18178985 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1364 296 327 77 83 chr13 102105335 102105418 -18178894 - L1MEf LINE L1 -5890 204 128 1 1364 2055 223 29 1 chr13 102105537 102105973 -18178339 + Lx7 LINE L1 6468 6935 -761 1 1364 959 88 66 0 chr13 102106226 102106363 -18177949 + L1Md_F2 LINE L1 6043 6188 -394 1 1364 9217 1 0 0 chr13 102106371 102107673 -18176639 - L1Md_A LINE L1 0 6582 5281 1 1364 2676 65 38 0 chr13 102107673 102108013 -18176299 - L1_Mus1 LINE L1 -4 6563 6211 1 1364 1765 328 83 45 chr13 102108975 102110318 -18173994 - L1_Mur3 LINE L1 -22 5858 4464 1 1364 3654 33 0 0 chr13 102110323 102110719 -18173593 + MTA_Mm LTR MaLR 1 396 0 1 1364 9839 36 1 0 chr13 102110719 102111816 -18172496 + MTA_Mm-int LTR MaLR 1 1098 0 1 1364 428 179 13 13 chr13 102111816 102111895 -18172417 + MTA_Mm LTR MaLR 1 79 -317 1 1364 449 269 119 14 chr13 102111895 102112152 -18172160 - L1_Mur3 LINE L1 -1658 4485 4136 1 1364 1402 265 90 44 chr13 102112153 102112896 -18171416 - L1_Mur3 LINE L1 -2328 3815 3039 1 1364 751 313 71 45 chr13 102112912 102113588 -18170724 - L1_Mur3 LINE L1 -3000 2886 2211 1 1364 3405 68 42 0 chr13 102113588 102114016 -18170296 + L1_Mus1 LINE L1 6121 6566 -1 1 1364 753 314 31 41 chr13 102114084 102114128 -18170184 - Lx5 LINE L1 -17 7033 6990 1 1364 183 42 0 0 chr13 102114128 102114152 -18170160 + (C)n Simple_repeat Simple_repeat 1 24 0 1 1364 753 314 31 41 chr13 102114152 102114399 -18169913 - Lx5 LINE L1 -61 6989 6745 1 1364 592 227 0 28 chr13 102114438 102114583 -18169729 - Lx6 LINE L1 -26 7434 7294 1 1364 243 358 28 17 chr13 102115070 102115249 -18169063 - L1_Mur3 LINE L1 -4010 1870 1690 1 1364 212 0 36 0 chr13 102115793 102115821 -18168491 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 1 1364 23 0 0 0 chr13 102116330 102116353 -18167959 + AT_rich Low_complexity Low_complexity 1 23 0 1 1364 300 246 84 84 chr13 102117295 102117486 -18166826 + L1ME4a LINE L1 5889 6079 -45 1 1364 183 167 0 0 chr13 102119815 102119857 -18164455 + (TA)n Simple_repeat Simple_repeat 2 43 0 1 1364 402 21 0 0 chr13 102120006 102120053 -18164259 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1364 491 273 156 12 chr13 102120053 102120209 -18164103 - B3A SINE B2 -17 181 2 1 1364 423 0 0 0 chr13 102120226 102120273 -18164039 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1364 663 216 32 0 chr13 102120280 102120405 -18163907 - RSINE1 SINE B4 -26 139 11 1 1364 615 211 37 0 chr13 102120616 102120725 -18163587 - PB1D10 SINE Alu -4 113 1 1 1364 1119 22 0 0 chr13 102120736 102120871 -18163441 - B1_Mm SINE Alu 0 147 13 1 1364 370 308 16 8 chr13 102121658 102121779 -18162533 + CT-rich Low_complexity Low_complexity 1 122 0 1 1364 747 246 187 28 chr13 102122685 102123006 -18161306 + MLT1B LTR MaLR 4 375 -15 1 1364 183 280 0 57 chr13 102123085 102123138 -18161174 - MIRm SINE MIR -90 186 137 1 1364 1917 168 32 6 chr13 102123464 102123811 -18160501 - ORR1D1 LTR MaLR -18 356 1 1 1364 501 17 0 0 chr13 102124102 102124160 -18160152 + (TG)n Simple_repeat Simple_repeat 2 59 0 1 1364 906 299 10 0 chr13 102124229 102124430 -18159882 - ID_B1 SINE B4 -20 204 2 1 1364 592 291 77 55 chr13 102127805 102127963 -18156349 - L1ME1 LINE L1 -1 6178 6017 1 1364 180 0 0 0 chr13 102127963 102127983 -18156329 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1364 592 291 77 55 chr13 102127983 102128227 -18156085 - L1ME1 LINE L1 -163 6016 5768 1 1364 400 263 78 64 chr13 102128222 102128441 -18155871 - L1M5 LINE L1 -348 5816 5595 1 1364 333 240 379 34 chr13 102128481 102128626 -18155686 - B3 SINE B2 -21 195 1 1 1364 665 270 15 56 chr13 102128657 102128853 -18155459 - B3A SINE B2 -10 188 1 1 1364 664 130 0 71 chr13 102129027 102129209 -18155103 + CT-rich Low_complexity Low_complexity 1 169 0 1 1364 319 239 128 89 chr13 102129210 102129389 -18154923 - L1MEc LINE L1 -4147 2253 2068 1 1364 33486 80 11 2 chr13 102130248 102135256 -18149056 + L1Md_F2 LINE L1 527 5586 -297 1 1364 7811 85 4 5 chr13 102135257 102136248 -18148064 + L1Md_F2 LINE L1 5588 6577 -5 1 1364 204 196 22 0 chr13 102136481 102136527 -18147785 + MIR SINE MIR 187 233 -29 1 1364 1016 289 143 34 chr13 102136982 102137430 -18146882 + MLT1D LTR MaLR 1 497 -8 1 1364 3765 157 18 10 chr13 102137849 102138467 -18145845 - RMER20B LTR ERVK 0 627 5 1 1364 1249 61 0 20 chr13 102139708 102139858 -18144454 + B1_Mm SINE Alu 1 147 0 1 1364 194 0 39 0 chr13 102139860 102139886 -18144426 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1364 1435 268 15 41 chr13 102140139 102140528 -18143784 + MTEa LTR MaLR 1 379 0 1 1364 744 242 45 61 chr13 102142247 102142493 -18141819 + MER121 Unknown Unknown 11 252 -160 1 1364 3504 113 50 0 chr13 102142978 102143474 -18140838 - Lx2A1 LINE L1 0 7008 6488 1 1364 6556 121 61 4 chr13 102145480 102146468 -18137844 + Lx3C LINE L1 5931 6974 -2 1 1364 34 0 0 0 chr13 102146741 102146775 -18137537 + AT_rich Low_complexity Low_complexity 1 34 0 1 1364 306 0 0 0 chr13 102146797 102146831 -18137481 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1 1364 17084 64 34 1 chr13 102147040 102149984 -18134328 - L1Md_F2 LINE L1 -12 6570 3514 1 1364 4700 159 19 33 chr13 102149995 102150931 -18133381 - L1Md_F2 LINE L1 -5380 1344 422 1 1364 681 13 0 0 chr13 102151076 102151154 -18133158 + (GA)n Simple_repeat Simple_repeat 1 78 0 1 1364 1477 241 94 41 chr13 102151328 102152054 -18132258 + L1_Mus1 LINE L1 261 1040 -5598 1 1364 2996 126 4 0 chr13 102152046 102152513 -18131799 + L1_Mus1 LINE L1 1812 2280 -3603 1 1364 13462 87 5 2 chr13 102152504 102155046 -18129266 + L1_Mus1 LINE L1 4017 6566 -1 1 1364 486 0 0 0 chr13 102155199 102155253 -18129059 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1364 1501 54 0 5 chr13 102155292 102155477 -18128835 - L1_Mus1 LINE L1 -678 5889 5706 2 1364 438 36 0 0 chr13 102155859 102155915 -18128397 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1364 250 329 61 0 chr13 102157520 102157602 -18126710 - MIRb SINE MIR -19 249 163 2 1364 2300 168 71 8 chr13 102157627 102158023 -18126289 - MTC LTR MaLR 0 421 1 2 1364 979 240 44 0 chr13 102158254 102158458 -18125854 - B3 SINE B2 0 216 4 2 1364 329 234 120 60 chr13 102158515 102158615 -18125697 - PB1D10 SINE Alu -2 115 10 2 1364 276 330 22 43 chr13 102158540 102158632 -18125680 - ID_B1 SINE B4 -63 161 72 2 1364 245 291 12 48 chr13 102158729 102158812 -18125500 - ID2 SINE ID -1 82 3 2 1364 260 234 16 22 chr13 102158823 102158913 -18125399 - PB1D10 SINE Alu -3 124 23 2 1364 333 154 89 13 chr13 102159090 102159169 -18125143 + HAL1-3A_ME LINE L1 1944 2028 -830 2 1364 302 67 22 0 chr13 102159169 102159214 -18125098 + (CATA)n Simple_repeat Simple_repeat 4 49 0 2 1364 2240 192 23 55 chr13 102159229 102159867 -18124445 - RMER13A LTR ERVK -4 856 141 2 1364 598 179 29 0 chr13 102159894 102160067 -18124245 + (CA)n Simple_repeat Simple_repeat 1 178 0 2 1364 513 0 0 0 chr13 102160473 102160530 -18123782 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1364 397 297 162 67 chr13 102160877 102161130 -18123182 - B4 SINE B4 -13 279 3 2 1364 585 226 0 0 chr13 102161138 102161397 -18122915 + (CA)n Simple_repeat Simple_repeat 1 259 0 2 1364 644 303 0 0 chr13 102161398 102161543 -18122769 - ID_B1 SINE B4 -1 223 79 2 1364 204 216 0 0 chr13 102161566 102161603 -18122709 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1364 227 345 50 25 chr13 102161957 102162076 -18122236 - MLT1C LTR MaLR -151 316 195 2 1364 365 237 66 0 chr13 102162206 102162282 -18122030 + B1F SINE Alu 2 82 -67 2 1364 222 246 129 14 chr13 102162302 102162372 -18121940 + ID2 SINE ID 6 83 0 2 1364 289 319 132 0 chr13 102162408 102162590 -18121722 + MIR SINE MIR 34 239 -23 2 1364 362 313 95 44 chr13 102163245 102163656 -18120656 - L1ME4a LINE L1 -286 5838 5407 2 1364 384 104 0 0 chr13 102163929 102163996 -18120316 + (TG)n Simple_repeat Simple_repeat 2 68 0 2 1364 424 320 24 94 chr13 102164005 102164064 -18120248 - B4A SINE B4 0 292 247 2 1364 4822 40 4 0 chr13 102164064 102164614 -18119698 + L1Md_F2 LINE L1 6031 6582 0 2 1364 424 320 24 94 chr13 102164614 102164809 -18119503 - B4A SINE B4 -46 246 56 2 1364 700 167 20 13 chr13 102165044 102165196 -18119116 + T-rich Low_complexity Low_complexity 1 153 0 2 1364 235 274 64 0 chr13 102165184 102165341 -18118971 + C-rich Low_complexity Low_complexity 1 167 0 2 1364 345 280 87 34 chr13 102165341 102165556 -18118756 - HAL1-3A_ME LINE L1 -419 2439 2285 2 1364 243 276 0 0 chr13 102165560 102165636 -18118676 + CT-rich Low_complexity Low_complexity 6 81 0 2 1364 202 273 61 0 chr13 102165636 102165702 -18118610 + C-rich Low_complexity Low_complexity 5 74 0 2 1364 711 0 0 0 chr13 102165703 102165782 -18118530 + (TTTCC)n Simple_repeat Simple_repeat 2 80 0 2 1364 576 0 0 0 chr13 102165783 102165847 -18118465 + (TTTTC)n Simple_repeat Simple_repeat 4 67 0 2 1364 2712 96 17 52 chr13 102165847 102166252 -18118060 - Lx LINE L1 -15 6639 6249 2 1364 599 258 127 55 chr13 102169654 102169962 -18114350 + Lx9 LINE L1 7315 7644 0 2 1364 588 254 99 67 chr13 102170340 102170652 -18113660 - L1MA6 LINE L1 -362 5938 5617 2 1364 495 0 0 0 chr13 102170709 102170764 -18113548 + (TC)n Simple_repeat Simple_repeat 1 55 0 2 1364 227 323 16 0 chr13 102170782 102170844 -18113468 - B4A SINE B4 -4 288 226 2 1364 557 290 52 75 chr13 102170865 102171500 -18112812 - L1MA6 LINE L1 -696 5604 4975 2 1364 209 132 26 0 chr13 102171508 102171546 -18112766 + T-rich Low_complexity Low_complexity 2 40 0 2 1364 282 357 0 0 chr13 102171547 102171617 -18112695 + RSINE1 SINE B4 5 74 -91 2 1364 1960 131 33 3 chr13 102171616 102171923 -18112389 + ORR1B2 LTR MaLR 52 367 0 2 1364 945 297 21 12 chr13 102171924 102172251 -18112061 - L1MA6 LINE L1 -1276 4867 4538 2 1364 1503 53 27 5 chr13 102172580 102172768 -18111544 + B2_Mm1a SINE B2 2 193 0 2 1364 200 225 0 0 chr13 102172857 102172897 -18111415 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 2 1364 461 307 14 14 chr13 102172939 102173078 -18111234 - ID_B1 SINE B4 -7 217 79 2 1364 242 286 0 0 chr13 102173207 102173263 -18111049 + ID4 SINE ID 8 63 -20 2 1364 224 41 59 39 chr13 102173280 102173331 -18110981 + (CAA)n Simple_repeat Simple_repeat 3 54 0 2 1364 3361 168 22 15 chr13 102173355 102173946 -18110366 + RLTR17 LTR ERVK 98 692 0 2 1364 340 338 115 53 chr13 102174307 102175369 -18108943 + L1ME4a LINE L1 3075 4202 -1944 2 1364 231 349 73 51 chr13 102175659 102175837 -18108475 + L1ME4a LINE L1 4746 4927 -1219 2 1364 482 301 41 41 chr13 102175883 102176053 -18108259 + B4A SINE B4 119 288 -4 2 1364 215 313 0 0 chr13 102176056 102176123 -18108189 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1364 438 298 94 19 chr13 102177317 102177584 -18106728 - L1MEc LINE L1 -1535 4784 4498 2 1364 426 314 146 14 chr13 102177585 102177798 -18106514 - MLT1F LTR MaLR -15 533 293 2 1364 473 320 17 28 chr13 102177833 102178013 -18106299 - MLT1F LTR MaLR -366 182 5 2 1364 226 265 49 49 chr13 102178961 102179084 -18105228 - L1MEc LINE L1 -6028 372 250 2 1364 228 298 14 47 chr13 102179102 102179250 -18105062 - L1MEc LINE L1 -6222 178 36 2 1364 279 0 0 0 chr13 102179425 102179456 -18104856 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1364 328 335 51 43 chr13 102179491 102179747 -18104565 + L1ME4a LINE L1 5643 5900 -224 2 1364 35374 71 7 5 chr13 102179976 102186150 -18098162 - L1Md_F2 LINE L1 0 6582 398 2 1364 2621 149 19 15 chr13 102186150 102186612 -18097700 - L1_Mm LINE L1 -881 5002 4539 2 1364 2774 98 15 0 chr13 102186611 102187007 -18097305 + Lx LINE L1 5587 5988 -666 2 1364 201 303 30 0 chr13 102187252 102187318 -18096994 - L2 LINE L2 -810 2609 2542 2 1364 278 47 0 44 chr13 102187415 102187460 -18096852 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 2 1364 412 327 26 0 chr13 102187624 102187737 -18096575 - PB1D7 SINE Alu 0 120 5 2 1364 335 237 272 37 chr13 102187737 102187760 -18096552 - ID_B1 SINE B4 0 224 57 2 1364 675 200 0 0 chr13 102188890 102189000 -18095312 + PB1D9 SINE Alu 2 111 -9 2 1364 387 0 0 0 chr13 102189001 102189044 -18095268 + (CAAT)n Simple_repeat Simple_repeat 3 45 0 2 1364 481 267 0 11 chr13 102189059 102189150 -18095162 + RSINE1 SINE B4 16 105 -60 2 1364 224 59 29 0 chr13 102189150 102189184 -18095128 + (CAAA)n Simple_repeat Simple_repeat 4 38 0 2 1364 347 73 18 0 chr13 102189285 102189340 -18094972 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2 1364 650 278 87 23 chr13 102189983 102190270 -18094042 + L1_Mur2 LINE L1 5473 5812 -547 2 1364 806 222 83 49 chr13 102190386 102190590 -18093722 - B3 SINE B2 -5 211 1 2 1364 656 168 65 0 chr13 102190606 102190713 -18093599 - PB1D9 SINE Alu -5 115 2 2 1364 238 50 24 24 chr13 102192417 102192458 -18091854 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2 1364 702 284 60 102 chr13 102193405 102193738 -18090574 + RMER15 LTR ERVL 257 575 0 2 1364 192 97 0 0 chr13 102193805 102193836 -18090476 + (TGG)n Simple_repeat Simple_repeat 3 33 0 2 1364 211 341 125 6 chr13 102193913 102194081 -18090231 - L2a LINE L2 -6 3420 3233 2 1364 232 179 107 0 chr13 102194330 102194386 -18089926 + Lx9 LINE L1 7397 7458 -186 2 1364 25 31 0 0 chr13 102194406 102194438 -18089874 + AT_rich Low_complexity Low_complexity 1 32 0 2 1364 366 280 66 50 chr13 102194605 102194907 -18089405 + ORR1E LTR MaLR 4 376 -3 2 1364 422 257 122 31 chr13 102195462 102195739 -18088573 + MLT1B LTR MaLR 3 357 -33 2 1364 419 0 20 0 chr13 102196041 102196092 -18088220 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1364 185 331 7 127 chr13 102196117 102196259 -18088053 - L2a LINE L2 -203 3172 3048 2 1364 2910 72 88 5 chr13 102196941 102197316 -18086996 + L1_Mus1 LINE L1 6160 6565 -2 2 1364 271 0 0 49 chr13 102197343 102197384 -18086928 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1364 342 123 0 0 chr13 102199262 102199319 -18084993 + (TCC)n Simple_repeat Simple_repeat 2 58 0 2 1364 378 0 0 0 chr13 102199479 102199521 -18084791 + (TTA)n Simple_repeat Simple_repeat 2 43 0 2 1364 418 285 180 39 chr13 102199779 102200213 -18084099 - L1MB7 LINE L1 -9 6175 5681 2 1364 454 256 48 56 chr13 102200200 102200460 -18083852 - L1MB7 LINE L1 -778 5368 5094 2 1364 343 261 119 50 chr13 102200576 102200781 -18083531 - B4A SINE B4 0 292 39 2 1364 386 289 117 18 chr13 102203851 102204073 -18080239 - L1ME4a LINE L1 -249 5875 5632 2 1364 348 246 42 0 chr13 102205020 102205099 -18079213 + B3A SINE B2 1 82 -113 2 1364 882 131 0 0 chr13 102205132 102205277 -18079035 + (TA)n Simple_repeat Simple_repeat 2 146 0 2 1364 21 36 0 0 chr13 102205311 102205339 -18078973 + AT_rich Low_complexity Low_complexity 1 28 0 2 1364 497 303 0 0 chr13 102205419 102205541 -18078771 - ID_B1 SINE B4 -7 217 96 2 1364 239 29 57 0 chr13 102205908 102205943 -18078369 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2 1364 460 315 141 25 chr13 102206005 102206366 -18077946 + L1MC4 LINE L1 7379 7781 -261 2 1364 1402 268 21 30 chr13 102206453 102206880 -18077432 + Lx8 LINE L1 7041 7463 -10 2 1364 417 39 0 0 chr13 102207084 102207135 -18077177 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1364 3482 92 2 4 chr13 102207179 102207629 -18076683 - L1Md_F2 LINE L1 -12 6570 6122 2 1364 243 36 0 0 chr13 102207629 102207657 -18076655 + L1_Mm LINE L1 5413 5440 -443 2 1364 399 230 9 89 chr13 102211067 102211199 -18073113 + B1_Mur2 SINE Alu 22 139 -10 2 1364 358 261 98 0 chr13 102212174 102212266 -18072046 + MER5A DNA MER1_type 84 184 -5 2 1364 1443 165 0 18 chr13 102213243 102213471 -18070841 + URR1B DNA MER1_type 2 225 0 2 1364 237 251 93 107 chr13 102214297 102214502 -18069810 + MLT1E2 LTR MaLR 37 238 -389 2 1364 627 81 0 0 chr13 102214915 102215001 -18069311 + (CA)n Simple_repeat Simple_repeat 1 86 0 2 1364 567 0 0 0 chr13 102215001 102215063 -18069249 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 1364 826 316 18 36 chr13 102215063 102215342 -18068970 + B4 SINE B4 5 278 -14 3 1364 378 300 92 23 chr13 102215794 102215968 -18068344 + MIR SINE MIR 23 208 -54 3 1364 487 284 80 0 chr13 102215979 102216155 -18068157 + L1MC LINE L1 4059 4248 -1898 3 1364 1002 35 34 10 chr13 102216215 102216420 -18067892 + (TAGA)n Simple_repeat Simple_repeat 1 210 0 3 1364 3669 110 16 0 chr13 102216534 102217045 -18067267 - L1_Mus3 LINE L1 0 6638 6120 3 1364 23 33 0 0 chr13 102217045 102217075 -18067237 + AT_rich Low_complexity Low_complexity 1 30 0 3 1364 273 287 9 61 chr13 102217934 102218049 -18066263 - L1M2 LINE L1 -1096 5047 4939 3 1364 1410 268 117 32 chr13 102218097 102218407 -18065905 + L1MA4A LINE L1 5258 5595 -708 3 1364 639 37 0 0 chr13 102218407 102218489 -18065823 + (CA)n Simple_repeat Simple_repeat 2 83 0 3 1364 1410 270 112 36 chr13 102218489 102218893 -18065419 + L1MA4A LINE L1 5596 6008 -289 3 1364 469 306 102 41 chr13 102219561 102219904 -18064408 - MLT1C LTR MaLR -5 462 85 3 1364 355 132 3 13 chr13 102220005 102220063 -18064249 + B1_Mus2 SINE Alu 52 137 -10 3 1364 336 24 0 0 chr13 102220063 102220104 -18064208 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 3 1364 344 107 0 82 chr13 102220104 102220117 -18064195 + B1_Mur3 SINE Alu 138 148 -1 3 1364 309 270 89 10 chr13 102221575 102221676 -18062636 - HAL1-3A_ME LINE L1 -468 2390 2282 3 1364 293 159 0 16 chr13 102221683 102221747 -18062565 + CT-rich Low_complexity Low_complexity 2 64 0 3 1364 344 335 77 18 chr13 102221758 102221928 -18062384 + MLT1G3 LTR MaLR 241 420 -175 3 1364 928 259 70 53 chr13 102222026 102222311 -18062001 - B4 SINE B4 -1 291 2 3 1364 628 275 0 0 chr13 102222389 102222531 -18061781 - ID_B1 SINE B4 -3 221 80 3 1364 277 327 10 0 chr13 102222716 102222817 -18061495 - MER5A1 DNA MER1_type -4 162 61 3 1364 357 62 0 0 chr13 102222862 102222910 -18061402 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1364 716 117 0 0 chr13 102222986 102223097 -18061215 - B1_Mus1 SINE Alu -1 147 37 3 1364 535 246 33 40 chr13 102223103 102223255 -18061057 - B4 SINE B4 -140 152 2 3 1364 412 245 137 30 chr13 102223644 102223812 -18060500 + MER3 DNA MER1_type 6 191 -18 3 1364 358 319 40 54 chr13 102226256 102226405 -18057907 + RSINE1 SINE B4 3 149 -16 3 1364 423 0 0 0 chr13 102226410 102226457 -18057855 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1364 669 188 0 0 chr13 102226457 102226601 -18057711 + (TG)n Simple_repeat Simple_repeat 1 144 0 3 1364 409 245 50 14 chr13 102227732 102227873 -18056439 - RMER15 LTR ERVL -13 562 417 3 1364 372 222 11 11 chr13 102228186 102228277 -18056035 + PB1D10 SINE Alu 26 116 -1 3 1364 213 242 10 31 chr13 102231391 102231489 -18052823 + GA-rich Low_complexity Low_complexity 4 99 0 3 1364 22 0 0 0 chr13 102231733 102231755 -18052557 + AT_rich Low_complexity Low_complexity 1 22 0 3 1364 325 344 62 0 chr13 102232330 102232458 -18051854 + B1F2 SINE Alu 2 137 -12 3 1364 384 22 0 0 chr13 102232458 102232503 -18051809 + (CAAAA)n Simple_repeat Simple_repeat 4 48 0 3 1364 206 128 0 25 chr13 102233060 102233100 -18051212 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1364 225 363 69 19 chr13 102233182 102233342 -18050970 - MIR SINE MIR -83 179 12 3 1364 243 0 0 0 chr13 102233985 102234012 -18050300 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 3 1364 185 150 75 0 chr13 102234764 102234804 -18049508 + L2c LINE L2 3340 3382 -5 3 1364 216 0 0 0 chr13 102235687 102235711 -18048601 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1364 441 36 0 0 chr13 102235966 102236021 -18048291 + (GA)n Simple_repeat Simple_repeat 1 55 0 3 1365 517 296 52 28 chr13 102236258 102236470 -18047842 - Lx8 LINE L1 -2 7471 7255 3 1365 265 298 112 17 chr13 102236821 102236937 -18047375 + MLT1G LTR MaLR 12 138 -453 3 1365 340 259 12 0 chr13 102237184 102237269 -18047043 + PB1D10 SINE Alu 25 110 -7 3 1365 21 0 0 0 chr13 102237780 102237801 -18046511 + AT_rich Low_complexity Low_complexity 1 21 0 3 1365 351 0 0 0 chr13 102238135 102238174 -18046138 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1365 459 0 0 0 chr13 102238174 102238224 -18046088 + (GA)n Simple_repeat Simple_repeat 1 51 0 3 1365 263 28 0 27 chr13 102238427 102238464 -18045848 + (TTG)n Simple_repeat Simple_repeat 2 37 0 3 1365 195 42 0 0 chr13 102239464 102239488 -18044824 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1365 899 176 169 10 chr13 102240190 102240385 -18043927 + URR1A DNA MER1_type 1 226 0 3 1365 952 238 128 7 chr13 102241561 102241857 -18042455 - MTE2b LTR MaLR -44 335 4 3 1365 1385 142 4 47 chr13 102242741 102242977 -18041335 + URR1A DNA MER1_type 1 226 0 3 1365 227 215 108 48 chr13 102242996 102243079 -18041233 - Tigger12 DNA MER2_type -968 991 904 3 1365 193 286 38 25 chr13 102243103 102243182 -18041130 - MER5B DNA MER1_type -4 174 95 3 1365 610 291 67 8 chr13 102243924 102244163 -18040149 + L1MA4 LINE L1 5678 5930 -370 3 1365 283 315 72 109 chr13 102244898 102245119 -18039193 - MLT1E1 LTR MaLR -82 572 360 3 1365 11941 151 26 28 chr13 102245469 102247651 -18036661 + L1_Mur3 LINE L1 3482 5657 -223 3 1365 543 257 166 11 chr13 102247647 102247828 -18036484 + Lx6 LINE L1 6654 6862 -598 3 1365 1707 202 40 6 chr13 102248007 102248355 -18035957 + Lx6 LINE L1 7091 7450 -10 3 1365 648 275 36 115 chr13 102250934 102251238 -18033074 + B4A SINE B4 7 286 -6 3 1365 207 0 0 0 chr13 102252139 102252162 -18032150 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 3 1365 581 252 146 70 chr13 102253549 102253864 -18030448 - ORR1E LTR MaLR -20 339 1 3 1365 1130 272 151 49 chr13 102254102 102254852 -18029460 + L1MA9 LINE L1 3837 4662 -1478 3 1365 514 296 59 70 chr13 102254901 102255289 -18029023 + L1MA9 LINE L1 5355 5738 -562 3 1365 557 272 16 0 chr13 102255289 102255414 -18028898 + RSINE1 SINE B4 3 129 -36 3 1365 359 238 85 105 chr13 102255464 102255697 -18028615 + L1MA9 LINE L1 5725 5916 -384 3 1365 360 0 0 0 chr13 102255797 102255837 -18028475 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1365 372 43 0 0 chr13 102256621 102256667 -18027645 + (TCTA)n Simple_repeat Simple_repeat 3 48 0 3 1365 1570 167 27 3 chr13 102259085 102259379 -18024933 + ORR1B1 LTR MaLR 83 383 -11 3 1365 240 299 160 8 chr13 102260834 102260954 -18023358 - MIRb SINE MIR -133 129 1 3 1365 995 246 173 25 chr13 102262169 102262422 -18021890 + Lx9 LINE L1 7229 7520 -124 3 1365 405 0 0 0 chr13 102262422 102262467 -18021845 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1365 995 246 173 25 chr13 102262467 102262572 -18021740 + Lx9 LINE L1 7521 7640 -4 3 1365 436 290 48 24 chr13 102263610 102263776 -18020536 + MIR SINE MIR 33 202 -60 3 1365 218 365 9 9 chr13 102264458 102264563 -18019749 + L2c LINE L2 3268 3372 -15 3 1365 967 129 11 0 chr13 102265130 102265308 -18019004 + (GGA)n Simple_repeat Simple_repeat 1 180 0 3 1365 395 274 43 43 chr13 102265555 102265696 -18018616 + HAL1-2a_MD LINE L1 2341 2481 -543 3 1365 6683 114 12 11 chr13 102265713 102266802 -18017510 - MusHAL1 LINE L1 -1213 1499 410 3 1365 4690 126 53 71 chr13 102266810 102267681 -18016631 + Lx2B LINE L1 6114 6968 -32 3 1365 324 0 0 0 chr13 102267686 102267722 -18016590 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 1365 663 231 36 30 chr13 102267854 102268019 -18016293 - Lx8 LINE L1 -726 6747 6582 3 1365 257 252 96 64 chr13 102268620 102268777 -18015535 + MIRb SINE MIR 57 218 -50 3 1365 1161 134 5 0 chr13 102270298 102270484 -18013828 - B2_Mm1t SINE B2 -5 188 2 3 1365 708 235 138 86 chr13 102271479 102271828 -18012484 - MLT1B LTR MaLR 0 390 24 3 1365 520 228 70 76 chr13 102272152 102272309 -18012003 + Lx5 LINE L1 6580 6735 -315 3 1365 830 241 122 0 chr13 102272336 102272573 -18011739 + Lx6 LINE L1 7195 7460 0 3 1365 191 61 30 0 chr13 102273107 102273140 -18011172 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 3 1365 26 0 0 0 chr13 102273324 102273350 -18010962 + AT_rich Low_complexity Low_complexity 1 26 0 3 1365 255 79 0 0 chr13 102273498 102273536 -18010776 + (TC)n Simple_repeat Simple_repeat 1 38 0 3 1365 396 59 0 0 chr13 102273569 102273620 -18010692 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1365 609 312 106 14 chr13 102273622 102274024 -18010288 - L1MA4 LINE L1 -353 5938 5500 3 1365 619 308 131 60 chr13 102274304 102274690 -18009622 + MLT1H LTR MaLR 80 489 0 3 1365 441 0 0 0 chr13 102274758 102274807 -18009505 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1365 227 308 13 13 chr13 102274949 102275028 -18009284 + GA-rich Low_complexity Low_complexity 3 81 0 3 1365 247 346 87 31 chr13 102275239 102275400 -18008912 - L2b LINE L2 -214 3161 2992 3 1365 425 386 79 29 chr13 102277445 102277787 -18006525 + MLT1K LTR MaLR 213 571 -24 3 1365 270 0 0 0 chr13 102278865 102278895 -18005417 + (GA)n Simple_repeat Simple_repeat 2 31 0 3 1365 186 282 50 121 chr13 102280111 102280252 -18004060 - MIR3 SINE MIR -29 179 49 3 1365 1287 219 80 28 chr13 102280738 102281090 -18003222 - ORR1D2 LTR MaLR 0 370 1 3 1365 195 343 171 50 chr13 102281227 102281408 -18002904 + MIRb SINE MIR 6 208 -60 3 1365 484 314 60 46 chr13 102282207 102282491 -18001821 + MER110A LTR ERV1 39 326 -142 3 1365 429 223 181 23 chr13 102282638 102282771 -18001541 + MER20 DNA MER1_type 22 175 -44 3 1365 180 0 0 0 chr13 102284122 102284142 -18000170 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1365 556 192 40 77 chr13 102284780 102284992 -17999320 - Lx9 LINE L1 -2 7642 7442 3 1365 369 0 0 0 chr13 102284992 102285033 -17999279 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1365 556 192 40 77 chr13 102285033 102285068 -17999244 - Lx9 LINE L1 -203 7441 7405 3 1365 1949 196 48 0 chr13 102285155 102285547 -17998765 - MTD LTR MaLR -8 411 1 3 1365 32346 76 11 1 chr13 102285673 102290042 -17994270 + L1Md_F2 LINE L1 1165 5586 -297 3 1365 7869 62 1 8 chr13 102290042 102291043 -17993269 + L1Md_F2 LINE L1 5587 6580 -2 3 1365 242 206 65 0 chr13 102291563 102291655 -17992657 + (TA)n Simple_repeat Simple_repeat 1 98 0 4 1365 25 31 0 0 chr13 102292137 102292169 -17992143 + AT_rich Low_complexity Low_complexity 1 32 0 4 1365 479 352 109 4 chr13 102292275 102292523 -17991789 - B4A SINE B4 -18 274 1 4 1365 337 265 129 67 chr13 102293664 102293842 -17990470 + MIRb SINE MIR 26 214 -54 4 1365 779 274 12 111 chr13 102295128 102295290 -17989022 + L1MA8 LINE L1 5519 5674 -617 4 1365 2215 161 11 24 chr13 102295290 102295671 -17988641 - ORR1C1 LTR MaLR 0 378 3 4 1365 779 276 14 104 chr13 102295671 102295958 -17988354 + L1MA8 LINE L1 5675 5906 -385 4 1365 1154 174 27 18 chr13 102296845 102297068 -17987244 + URR1B DNA MER1_type 1 225 0 4 1365 30 27 0 0 chr13 102297614 102297651 -17986661 + AT_rich Low_complexity Low_complexity 1 37 0 4 1365 2163 123 9 58 chr13 102299510 102299856 -17984456 + ORR1A4 LTR MaLR 1 329 0 4 1365 317 278 61 61 chr13 102301240 102301420 -17982892 - MIR SINE MIR -3 259 80 4 1365 202 278 19 0 chr13 102301485 102301539 -17982773 - L2b LINE L2 -16 3359 3305 4 1365 198 182 0 0 chr13 102303733 102303758 -17980554 + polypurine Low_complexity Low_complexity 2 26 0 4 1365 1055 129 0 6 chr13 102303758 102303937 -17980375 + (GGGA)n Simple_repeat Simple_repeat 3 180 0 4 1365 198 182 0 0 chr13 102303937 102303955 -17980357 + polypurine Low_complexity Low_complexity 27 44 0 4 1365 555 16 0 0 chr13 102303981 102304045 -17980267 + (GGAA)n Simple_repeat Simple_repeat 1 64 0 4 1365 273 295 56 19 chr13 102305024 102305131 -17979181 - LTR68 LTR ERV1 -335 405 295 4 1365 204 83 0 53 chr13 102306031 102306069 -17978243 + (TTTTTG)n Simple_repeat Simple_repeat 2 37 0 4 1365 797 226 78 118 chr13 102308021 102308393 -17975919 - ORR1E LTR MaLR -2 357 1 4 1365 627 131 33 0 chr13 102310224 102310346 -17973966 + GA-rich Low_complexity Low_complexity 2 127 0 4 1365 516 304 199 5 chr13 102312133 102312511 -17971801 + L1MB2 LINE L1 5607 6057 -114 4 1365 465 76 0 0 chr13 102313152 102313218 -17971094 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 1365 1164 35 0 0 chr13 102315478 102315619 -17968693 + (GA)n Simple_repeat Simple_repeat 2 142 0 4 1365 324 0 0 0 chr13 102316224 102316260 -17968052 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1365 450 305 55 148 chr13 102317831 102318285 -17966027 + LTR33B LTR ERVL 76 487 -16 4 1365 799 118 14 0 chr13 102318455 102318599 -17965713 + (GGA)n Simple_repeat Simple_repeat 2 147 0 4 1365 464 325 124 42 chr13 102318738 102319035 -17965277 + MLT1D LTR MaLR 7 318 -187 4 1365 278 0 54 0 chr13 102319035 102319072 -17965240 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1365 464 325 124 42 chr13 102319072 102319224 -17965088 + MLT1D LTR MaLR 319 493 -12 4 1365 242 322 19 69 chr13 102319444 102319604 -17964708 - MIRb SINE MIR -70 198 47 4 1365 671 206 0 6 chr13 102319915 102320096 -17964216 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1365 225 163 0 0 chr13 102320111 102320160 -17964152 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1365 259 284 40 0 chr13 102320160 102320234 -17964078 - ID4 SINE ID -6 77 1 4 1365 300 328 45 78 chr13 102320508 102320776 -17963536 - MLT1C LTR MaLR -5 462 204 4 1365 465 148 0 0 chr13 102320776 102320857 -17963455 + (TC)n Simple_repeat Simple_repeat 1 81 0 4 1365 685 294 119 69 chr13 102321441 102321831 -17962481 - MLT1B LTR MaLR -4 463 2 4 1365 432 247 11 0 chr13 102322243 102322332 -17961980 - PB1D7 SINE Alu -7 113 24 4 1365 466 289 88 24 chr13 102323794 102323993 -17960319 + B3A SINE B2 1 212 -4 4 1365 921 140 0 45 chr13 102324175 102324186 -17960126 - B1_Mur4 SINE Alu 0 150 143 4 1365 486 61 0 0 chr13 102324186 102324252 -17960060 + (TTGG)n Simple_repeat Simple_repeat 2 67 0 4 1365 921 140 0 45 chr13 102324252 102324397 -17959915 - B1_Mur4 SINE Alu -8 142 1 4 1365 714 298 98 110 chr13 102324605 102325024 -17959288 - Lx7 LINE L1 -9 7464 7039 4 1365 340 216 27 0 chr13 102325718 102325792 -17958520 + B3 SINE B2 135 210 -6 4 1365 24 32 0 0 chr13 102325795 102325826 -17958486 + AT_rich Low_complexity Low_complexity 1 31 0 4 1365 261 0 0 0 chr13 102325902 102325931 -17958381 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1365 1245 77 41 6 chr13 102326543 102326713 -17957599 + B2_Mm2 SINE B2 1 176 -19 4 1365 180 152 0 0 chr13 102326721 102326754 -17957558 + GA-rich Low_complexity Low_complexity 2 34 0 4 1365 424 275 23 14 chr13 102328233 102328381 -17955931 - Lx7 LINE L1 -364 5936 5775 4 1365 332 289 7 105 chr13 102328382 102328398 -17955914 + MT2B LTR ERVL 155 235 -366 4 1365 601 244 0 8 chr13 102328398 102328518 -17955794 + B1_Mur1 SINE Alu 4 122 -27 4 1365 778 266 252 47 chr13 102328527 102329042 -17955270 - Lx7 LINE L1 -526 5774 5177 4 1365 21 0 0 0 chr13 102329050 102329071 -17955241 + AT_rich Low_complexity Low_complexity 1 21 0 4 1365 534 306 60 72 chr13 102329204 102329539 -17954773 + MTE2a LTR MaLR 34 364 -15 4 1365 512 247 0 0 chr13 102330679 102330776 -17953536 + B1F SINE Alu 1 97 -52 4 1365 529 215 0 0 chr13 102330829 102330922 -17953390 - Lx9 LINE L1 -937 6707 6615 4 1365 617 140 65 5 chr13 102330899 102331074 -17953238 + Lx9 LINE L1 7392 7601 -43 4 1365 413 132 24 0 chr13 102331268 102331351 -17952961 + (CAGA)n Simple_repeat Simple_repeat 2 86 0 4 1365 511 135 21 0 chr13 102331350 102331446 -17952866 + GA-rich Low_complexity Low_complexity 3 100 0 4 1365 271 287 161 8 chr13 102331449 102331579 -17952733 - MLT1H LTR MaLR -323 226 77 4 1365 191 305 55 37 chr13 102332960 102333069 -17951243 - L2a LINE L2 -356 3070 2960 4 1365 1381 241 101 27 chr13 102333977 102334493 -17949819 + L1MC1 LINE L1 5461 6014 -319 4 1365 581 325 25 41 chr13 102334559 102334803 -17949509 + B4A SINE B4 33 272 -20 4 1365 229 360 62 9 chr13 102335152 102335264 -17949048 + ORR1E LTR MaLR 22 139 -220 4 1365 1475 280 65 58 chr13 102335913 102336729 -17947583 - MER45R DNA Tip100 0 1581 760 4 1365 9168 54 5 0 chr13 102336729 102337851 -17946461 + L1Md_F2 LINE L1 4459 5586 -297 4 1365 8198 47 8 0 chr13 102337851 102338837 -17945475 + L1Md_F2 LINE L1 5587 6580 -2 4 1365 243 269 112 72 chr13 102338880 102339032 -17945280 - MER45R DNA Tip100 -802 779 622 4 1365 257 282 63 9 chr13 102339033 102339144 -17945168 + PB1D7 SINE Alu 2 118 -2 4 1365 381 22 0 0 chr13 102339945 102339991 -17944321 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1365 563 133 141 8 chr13 102340093 102340214 -17944098 - Lx5 LINE L1 0 7050 6914 4 1365 287 348 28 21 chr13 102340359 102340503 -17943809 + L3 LINE CR1 3442 3586 -903 4 1365 1143 279 74 20 chr13 102341844 102342195 -17942117 + ORR1D2 LTR MaLR 1 370 0 4 1365 470 326 19 48 chr13 102342358 102342564 -17941748 + Tigger5 DNA MER2_type 39 238 -2168 4 1365 1231 253 42 91 chr13 102342653 102343036 -17941276 - MTEa LTR MaLR -4 375 12 4 1365 688 239 108 35 chr13 102343145 102343399 -17940913 - MLT1G1 LTR MaLR -13 566 281 4 1365 1838 207 26 45 chr13 102343513 102343938 -17940374 + MTD LTR MaLR 3 419 0 4 1365 332 350 193 15 chr13 102344519 102344789 -17939523 + Kanga2_a DNA Tc2 4 321 -567 4 1365 516 156 0 0 chr13 102345421 102345511 -17938801 + CT-rich Low_complexity Low_complexity 1 90 0 4 1365 180 200 0 0 chr13 102346113 102346153 -17938159 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1365 2162 252 118 25 chr13 102346154 102346242 -17938070 - Lx8 LINE L1 -21 7452 7364 4 1365 2286 137 22 3 chr13 102346242 102346602 -17937710 - ORR1B2 LTR MaLR 0 367 1 4 1365 2162 252 118 25 chr13 102346602 102347193 -17937119 - Lx8 LINE L1 -110 7363 6710 4 1365 525 32 0 0 chr13 102347306 102347369 -17936943 + (GGGGA)n Simple_repeat Simple_repeat 4 66 0 4 1365 221 362 17 91 chr13 102347794 102347870 -17936442 - RSINE1 SINE B4 -1 164 2 4 1365 416 198 0 40 chr13 102347870 102347970 -17936342 - BC1_Mm scRNA scRNA -56 96 1 4 1365 3735 59 29 6 chr13 102347973 102348452 -17935860 - L1Md_F2 LINE L1 0 6582 6093 4 1365 3223 37 0 0 chr13 102348452 102348829 -17935483 + L1Md_F2 LINE L1 5715 6091 -491 4 1365 2572 116 18 3 chr13 102348849 102348907 -17935405 - L1_Mur2 LINE L1 -373 5504 5447 4 1365 369 0 0 0 chr13 102348907 102348948 -17935364 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 4 1365 2572 116 18 3 chr13 102348948 102349269 -17935043 - L1_Mur2 LINE L1 -431 5446 5120 4 1365 5295 127 15 22 chr13 102349269 102350090 -17934222 + Lx4A LINE L1 6238 7052 -6 4 1365 26 0 0 0 chr13 102350112 102350138 -17934174 + AT_rich Low_complexity Low_complexity 1 26 0 4 1365 234 232 54 0 chr13 102350415 102350471 -17933841 + PB1D9 SINE Alu 27 85 -35 4 1365 749 250 88 6 chr13 102350477 102350658 -17933654 + 7SLRNA srpRNA srpRNA 24 219 -95 4 1365 480 154 39 0 chr13 102350726 102350882 -17933430 + (TAGA)n Simple_repeat Simple_repeat 4 165 0 4 1365 1038 246 188 6 chr13 102351028 102351368 -17932944 + MTD LTR MaLR 18 419 0 4 1365 212 214 18 0 chr13 102351476 102351532 -17932780 + CT-rich Low_complexity Low_complexity 1 57 0 4 1365 399 272 116 25 chr13 102351550 102351778 -17932534 - MTEa LTR MaLR 0 379 112 4 1365 219 345 0 0 chr13 102352048 102352106 -17932206 - ID4 SINE ID -18 65 8 4 1365 336 259 150 60 chr13 102352200 102352467 -17931845 + MER33 DNA MER1_type 34 324 0 4 1365 433 269 121 39 chr13 102352590 102352705 -17931607 - MLT1D LTR MaLR 0 505 376 4 1365 3295 43 13 3 chr13 102352705 102353097 -17931215 - MTA_Mm LTR MaLR 0 396 1 4 1365 9238 46 2 0 chr13 102353097 102354193 -17930119 - MTA_Mm-int LTR MaLR 0 1098 1 4 1365 3441 40 0 0 chr13 102354193 102354589 -17929723 - MTA_Mm LTR MaLR 0 396 1 4 1365 433 269 121 39 chr13 102354589 102354703 -17929609 - MLT1D LTR MaLR -130 375 257 4 1365 604 294 37 38 chr13 102354753 102355032 -17929280 - L1MB8 LINE L1 -83 6095 5818 4 1365 288 0 0 0 chr13 102355394 102355426 -17928886 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1365 335 307 69 50 chr13 102355511 102355713 -17928599 - MLT1C LTR MaLR 0 467 262 4 1365 207 0 0 0 chr13 102357596 102357619 -17926693 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1365 396 0 0 0 chr13 102360838 102360882 -17923430 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1365 702 290 103 20 chr13 102361986 102362433 -17921879 - L1MD LINE L1 -2981 3165 2682 4 1365 206 250 15 0 chr13 102363006 102363074 -17921238 + (TTTA)n Simple_repeat Simple_repeat 3 71 0 4 1365 696 224 64 106 chr13 102363080 102363409 -17920903 - Lx9 LINE L1 -11 7633 7319 4 1365 234 291 57 19 chr13 102365206 102365311 -17919001 + MIRc SINE MIR 6 114 -154 4 1365 444 15 46 0 chr13 102365397 102365462 -17918850 + (TG)n Simple_repeat Simple_repeat 2 69 0 5 1365 37 39 0 0 chr13 102365760 102365811 -17918501 + AT_rich Low_complexity Low_complexity 1 51 0 5 1366 245 243 326 34 chr13 102367331 102367506 -17916806 + MIRb SINE MIR 35 260 -8 5 1366 706 187 32 13 chr13 102368389 102368546 -17915766 - MT2A LTR ERVL -309 224 65 5 1366 533 189 7 99 chr13 102368528 102368669 -17915643 - MT2A LTR ERVL -404 129 2 5 1366 519 95 0 0 chr13 102368958 102369032 -17915280 + (TG)n Simple_repeat Simple_repeat 2 75 0 5 1366 405 0 0 0 chr13 102370521 102370566 -17913746 + (GA)n Simple_repeat Simple_repeat 1 45 0 5 1366 351 0 0 0 chr13 102370836 102370875 -17913437 + (TC)n Simple_repeat Simple_repeat 2 40 0 5 1366 2891 144 88 12 chr13 102373579 102374070 -17910242 - RLTR11A LTR ERVK 0 528 1 5 1366 828 169 207 6 chr13 102374725 102374904 -17909408 + B3 SINE B2 2 216 0 5 1366 237 65 87 0 chr13 102374922 102374968 -17909344 + Lx2A LINE L1 6956 7005 -3 5 1366 690 294 86 70 chr13 102376692 102377167 -17907145 - MLT1D LTR MaLR -13 492 10 5 1366 30 0 0 0 chr13 102377749 102377779 -17906533 + AT_rich Low_complexity Low_complexity 1 30 0 5 1366 180 0 0 0 chr13 102378041 102378061 -17906251 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 1366 1415 253 51 12 chr13 102379636 102380068 -17904244 + L1MB2 LINE L1 5628 6076 -95 5 1366 477 0 0 0 chr13 102380076 102380129 -17904183 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1366 396 274 35 17 chr13 102380142 102380257 -17904055 - B1F SINE Alu -20 129 13 5 1366 22 0 0 0 chr13 102380351 102380373 -17903939 + AT_rich Low_complexity Low_complexity 1 22 0 5 1366 198 0 0 0 chr13 102380417 102380439 -17903873 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1366 216 172 0 0 chr13 102382657 102382715 -17901597 + T-rich Low_complexity Low_complexity 1 58 0 5 1366 283 206 246 27 chr13 102382873 102382983 -17901329 - MER5A DNA MER1_type -5 184 51 5 1366 544 188 8 8 chr13 102383227 102383290 -17901022 + polypurine Low_complexity Low_complexity 1 64 0 5 1366 1195 139 37 0 chr13 102383290 102383442 -17900870 + B2_Mm2 SINE B2 2 153 -42 5 1366 284 0 28 0 chr13 102383442 102383478 -17900834 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1366 1195 139 37 0 chr13 102383478 102383512 -17900800 + B2_Mm2 SINE B2 154 194 -1 5 1366 544 188 8 8 chr13 102383512 102383577 -17900735 + polypurine Low_complexity Low_complexity 65 129 0 5 1366 296 321 9 0 chr13 102384618 102384730 -17899582 - L1MEg LINE L1 -3367 2779 2667 5 1366 332 316 159 9 chr13 102384915 102385148 -17899164 - L1MEg LINE L1 -3748 2398 2131 5 1366 295 261 51 96 chr13 102385212 102385745 -17898567 - L1MEg LINE L1 -4147 2095 1587 5 1366 28 0 0 0 chr13 102385787 102385815 -17898497 + AT_rich Low_complexity Low_complexity 1 28 0 5 1366 439 207 58 106 chr13 102386067 102386256 -17898056 - B3A SINE B2 -16 182 3 5 1366 231 350 54 25 chr13 102386286 102386600 -17897712 - L1MEg LINE L1 -4956 1286 964 5 1366 1762 112 11 0 chr13 102387318 102387586 -17896726 - Lx2A1 LINE L1 -7 7001 6731 5 1366 1775 122 11 7 chr13 102387595 102387876 -17896436 + IAPEY2_LTR LTR ERVK 32 313 -44 5 1366 1126 160 0 128 chr13 102388000 102388124 -17896188 + URR1B DNA MER1_type 1 98 -127 5 1366 1042 88 0 33 chr13 102388124 102388276 -17896036 - B1_Mus1 SINE Alu 0 148 2 5 1366 1208 160 0 128 chr13 102388276 102388409 -17895903 + URR1B DNA MER1_type 99 225 0 5 1366 406 316 91 38 chr13 102389148 102389446 -17894866 + LTR85c LTR Gypsy? 151 455 -368 5 1366 1288 77 122 5 chr13 102390856 102391052 -17893260 + URR1B DNA MER1_type 7 225 0 5 1366 1332 62 11 6 chr13 102391169 102391347 -17892965 + L1_Mus3 LINE L1 6441 6619 -19 5 1366 207 0 0 0 chr13 102391348 102391371 -17892941 + (TAA)n Simple_repeat Simple_repeat 1 23 0 5 1366 646 335 23 14 chr13 102392006 102392224 -17892088 + MLT2B3 LTR ERVL 335 554 0 5 1366 390 21 0 0 chr13 102393016 102393063 -17891249 + (TTGG)n Simple_repeat Simple_repeat 2 48 0 5 1366 207 333 43 0 chr13 102393979 102394072 -17890240 - MIRb SINE MIR -68 200 104 5 1366 787 300 55 21 chr13 102396913 102397148 -17887164 + B4 SINE B4 1 243 -49 5 1366 339 328 0 8 chr13 102397167 102397287 -17887025 + GA-rich Low_complexity Low_complexity 4 122 0 5 1366 1437 251 101 21 chr13 102397494 102397872 -17886440 - MTD LTR MaLR 0 419 12 5 1366 807 224 0 0 chr13 102398329 102398476 -17885836 - B1_Mus2 SINE Alu 0 147 1 5 1366 525 313 6 24 chr13 102398476 102398502 -17885810 - ID SINE ID -147 77 55 5 1366 289 237 116 14 chr13 102398481 102398588 -17885724 + B1F SINE Alu 6 116 -32 5 1366 1392 87 38 0 chr13 102398888 102399071 -17885241 - B2_Mm1a SINE B2 -3 190 1 5 1366 612 307 150 38 chr13 102399922 102400402 -17883910 + L1MC2 LINE L1 5766 6299 -45 5 1366 22 0 0 0 chr13 102400408 102400430 -17883882 + AT_rich Low_complexity Low_complexity 1 22 0 5 1366 1158 112 0 0 chr13 102400451 102400629 -17883683 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 5 1366 248 210 25 82 chr13 102400707 102400807 -17883505 + MTE2b LTR MaLR 291 379 0 5 1366 202 75 75 0 chr13 102401336 102401376 -17882936 + (CCA)n Simple_repeat Simple_repeat 3 45 0 5 1366 288 273 179 18 chr13 102402428 102402540 -17881772 - MER5A1 DNA MER1_type -35 131 2 5 1366 369 62 0 0 chr13 102403380 102403428 -17880884 + (TC)n Simple_repeat Simple_repeat 2 49 0 5 1366 402 298 145 13 chr13 102403894 102404122 -17880190 - LTR48 LTR ERV1 -13 774 517 5 1366 675 283 31 16 chr13 102404412 102404606 -17879706 - B3A SINE B2 0 198 2 5 1366 233 262 54 87 chr13 102405078 102405170 -17879142 - RLTR12A LTR ERVK -334 234 146 5 1366 214 270 77 101 chr13 102406324 102406493 -17877819 + MIRb SINE MIR 66 230 -38 5 1366 441 310 210 33 chr13 102408461 102408761 -17875551 - MLT1D LTR MaLR -3 502 150 5 1366 186 133 0 0 chr13 102409832 102409862 -17874450 + (TCTCCC)n Simple_repeat Simple_repeat 6 35 0 5 1366 260 368 47 47 chr13 102410570 102410804 -17873508 - MamSINE1 SINE tRNA -44 246 13 5 1366 304 313 36 0 chr13 102411353 102411436 -17872876 - PB1D10 SINE Alu -26 91 6 5 1366 26 0 0 0 chr13 102412015 102412041 -17872271 + AT_rich Low_complexity Low_complexity 1 26 0 5 1366 199 205 0 0 chr13 102412104 102412143 -17872169 - L3 LINE CR1 -197 4292 4254 5 1366 662 208 19 49 chr13 102413150 102413312 -17871000 + MTD LTR MaLR 1 157 -262 5 1366 608 137 167 8 chr13 102413289 102413421 -17870891 - MTC LTR MaLR -268 153 1 5 1366 2862 138 150 12 chr13 102413421 102413975 -17870337 - MTC-int LTR MaLR -694 1269 643 5 1366 250 83 41 20 chr13 102413958 102414007 -17870305 - MTC-int LTR MaLR -1168 90 41 5 1366 814 293 62 46 chr13 102414001 102414437 -17869875 - MT2B LTR ERVL -97 504 1 5 1366 350 356 58 11 chr13 102414650 102414840 -17869472 - MLT1D LTR MaLR 0 505 307 5 1366 4629 191 71 15 chr13 102414846 102415776 -17868536 - Lx6 LINE L1 -3 7457 6476 5 1366 15458 150 41 79 chr13 102415777 102416181 -17868131 + Lx7 LINE L1 2664 3091 -2789 5 1366 330 26 0 0 chr13 102416181 102416220 -17868092 + (TAA)n Simple_repeat Simple_repeat 2 40 0 5 1366 15458 150 41 79 chr13 102416220 102416384 -17867928 + Lx7 LINE L1 3092 3260 -2620 5 1366 700 144 28 2 chr13 102416384 102416513 -17867799 + B1_Mur3 SINE Alu 6 149 0 5 1366 15458 150 41 79 chr13 102416513 102416613 -17867699 + Lx7 LINE L1 3261 3363 -2517 5 1366 640 99 0 11 chr13 102416613 102416705 -17867607 + B1_Mus2 SINE Alu 56 146 -1 5 1366 15458 150 41 79 chr13 102416705 102417471 -17866841 + Lx7 LINE L1 3364 4158 -1722 5 1366 3150 93 10 0 chr13 102417471 102417867 -17866445 + MTB LTR MaLR 1 400 0 5 1366 15458 150 41 79 chr13 102417867 102418325 -17865987 + Lx7 LINE L1 4159 4623 -1257 5 1366 324 0 0 0 chr13 102418325 102418361 -17865951 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1366 15458 165 36 61 chr13 102418361 102420165 -17864147 + Lx7 LINE L1 4624 6463 -1233 5 1366 410 325 111 63 chr13 102420165 102420480 -17863832 - MLT1D LTR MaLR -170 335 6 5 1366 683 256 0 0 chr13 102421738 102421867 -17862445 + RSINE1 SINE B4 3 131 -34 5 1366 279 0 0 0 chr13 102421870 102421901 -17862411 + (CA)n Simple_repeat Simple_repeat 2 32 0 5 1366 396 305 169 40 chr13 102423066 102423367 -17860945 - MER2 DNA MER2_type -5 340 1 5 1366 224 328 179 0 chr13 102423972 102424106 -17860206 - MIR SINE MIR 0 262 105 5 1366 559 257 0 26 chr13 102424172 102424328 -17859984 - HAL1-2a_MD LINE L1 -528 2496 2345 5 1366 250 316 0 12 chr13 102425180 102425260 -17859052 + CT-rich Low_complexity Low_complexity 2 80 0 5 1366 778 287 99 56 chr13 102425821 102426338 -17857974 + HAL1 LINE L1 1656 2194 -313 5 1366 189 0 0 0 chr13 102426518 102426539 -17857773 + (TG)n Simple_repeat Simple_repeat 2 22 0 5 1366 279 0 0 0 chr13 102427081 102427112 -17857200 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1366 733 331 66 26 chr13 102427880 102428227 -17856085 + MLT1A0 LTR MaLR 4 364 -1 5 1366 875 84 28 0 chr13 102428611 102428754 -17855558 + (GGAGA)n Simple_repeat Simple_repeat 1 147 0 5 1366 418 165 24 35 chr13 102428779 102428949 -17855363 + (CAGAGA)n Simple_repeat Simple_repeat 6 173 0 5 1366 972 124 11 11 chr13 102429933 102430112 -17854200 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5 1366 28 48 0 0 chr13 102431187 102431229 -17853083 + AT_rich Low_complexity Low_complexity 1 42 0 5 1366 264 322 67 47 chr13 102431889 102432039 -17852273 - MIR SINE MIR -11 251 99 5 1366 441 322 69 56 chr13 102432820 102433074 -17851238 - MLT1F1 LTR MaLR -181 388 170 5 1366 383 292 45 58 chr13 102434509 102434665 -17849647 + MIRb SINE MIR 3 156 -112 5 1366 184 265 0 0 chr13 102434692 102434726 -17849586 + MIRb SINE MIR 217 250 -18 5 1366 221 237 0 0 chr13 102435518 102435556 -17848756 + B4A SINE B4 16 53 -239 5 1366 665 330 13 18 chr13 102435632 102435860 -17848452 + B4 SINE B4 66 292 0 5 1366 204 263 0 0 chr13 102435866 102435942 -17848370 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 1366 739 274 22 0 chr13 102436098 102436277 -17848035 - B3A SINE B2 -15 183 1 5 1366 1108 77 35 14 chr13 102436601 102436746 -17847566 + B1_Mus1 SINE Alu 1 148 0 5 1366 252 86 0 0 chr13 102436747 102436782 -17847530 + (A)n Simple_repeat Simple_repeat 1 35 0 5 1366 270 286 13 9 chr13 102437379 102437469 -17846843 - BC1_Mm scRNA scRNA -65 87 1 5 1366 285 51 0 0 chr13 102437656 102437695 -17846617 + (TCTCTG)n Simple_repeat Simple_repeat 4 42 0 5 1366 424 280 56 7 chr13 102437812 102437967 -17846345 - L1MA4 LINE L1 -208 5948 5796 5 1366 351 0 0 0 chr13 102437967 102438006 -17846306 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1366 382 286 35 53 chr13 102438006 102438020 -17846292 - L1MA4 LINE L1 -361 5795 5782 5 1366 705 267 211 29 chr13 102438020 102438433 -17845879 - L1M2 LINE L1 -1255 4888 4401 5 1366 320 222 154 11 chr13 102438447 102438538 -17845774 - L1M2 LINE L1 -703 6302 6199 6 1366 1100 267 88 77 chr13 102438614 102439232 -17845080 - L1M2 LINE L1 -426 6156 5489 6 1366 994 292 80 118 chr13 102439246 102440031 -17844281 - L1M2 LINE L1 -2250 4595 3821 6 1366 468 306 0 45 chr13 102440031 102440185 -17844127 - RSINE1 SINE B4 -17 148 2 6 1366 990 292 80 118 chr13 102440185 102440554 -17843758 - L1M2 LINE L1 -3025 3820 3485 6 1366 531 0 0 0 chr13 102440557 102440616 -17843696 + (GA)n Simple_repeat Simple_repeat 2 60 0 6 1366 309 176 68 0 chr13 102440619 102440693 -17843619 + Lx5 LINE L1 5799 5877 -1173 6 1366 822 319 98 68 chr13 102440823 102442005 -17842307 - L1M2 LINE L1 -4148 2701 1484 6 1366 942 268 53 128 chr13 102442330 102442690 -17841622 + MTE2a LTR MaLR 10 342 -37 6 1366 25 65 0 0 chr13 102442768 102442814 -17841498 + AT_rich Low_complexity Low_complexity 1 46 0 6 1366 592 36 24 0 chr13 102443020 102443103 -17841209 + (TC)n Simple_repeat Simple_repeat 2 86 0 6 1366 212 173 12 62 chr13 102443103 102443183 -17841129 + (TA)n Simple_repeat Simple_repeat 2 77 0 6 1366 1069 216 248 3 chr13 102443199 102443517 -17840795 - MT2A LTR ERVL -89 444 95 6 1366 257 254 0 31 chr13 102443516 102443581 -17840731 - MT2A LTR ERVL -404 129 67 6 1366 207 0 0 0 chr13 102444122 102444145 -17840167 + (TTA)n Simple_repeat Simple_repeat 2 24 0 6 1366 982 240 73 28 chr13 102445874 102446161 -17838151 - ORR1E LTR MaLR -2 357 58 6 1366 189 0 0 0 chr13 102447098 102447119 -17837193 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 6 1366 1368 67 0 0 chr13 102447119 102447299 -17837013 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1366 1074 171 36 18 chr13 102447715 102447936 -17836376 + URR1A DNA MER1_type 2 226 0 6 1366 194 326 22 11 chr13 102448972 102449062 -17835250 + MIRb SINE MIR 130 220 -48 6 1366 747 192 20 0 chr13 102450004 102450150 -17834162 - B1_Mur4 SINE Alu 0 150 2 6 1366 306 73 0 0 chr13 102451630 102451671 -17832641 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1366 372 22 0 0 chr13 102452241 102452286 -17832026 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 6 1366 675 0 0 0 chr13 102454550 102454625 -17829687 + (GAAA)n Simple_repeat Simple_repeat 4 78 0 6 1366 356 186 98 49 chr13 102455628 102455730 -17828582 - PB1D10 SINE Alu -10 107 1 6 1366 252 0 0 0 chr13 102456076 102456104 -17828208 + (T)n Simple_repeat Simple_repeat 1 28 0 6 1366 244 308 43 50 chr13 102456558 102456698 -17827614 - Tigger14a DNA MER2_type -97 227 89 6 1366 558 204 192 0 chr13 102458080 102458247 -17826065 - Lx9 LINE L1 -1 7643 7445 6 1366 402 69 0 0 chr13 102459502 102459560 -17824752 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1366 684 182 0 0 chr13 102459809 102459941 -17824371 + (TA)n Simple_repeat Simple_repeat 1 132 0 6 1366 231 36 0 0 chr13 102460006 102460034 -17824278 + (CA)n Simple_repeat Simple_repeat 2 29 0 6 1366 189 74 0 0 chr13 102461625 102461652 -17822660 + (GA)n Simple_repeat Simple_repeat 1 27 0 6 1366 432 0 0 0 chr13 102462879 102462927 -17821385 + (GA)n Simple_repeat Simple_repeat 2 49 0 6 1366 225 0 0 0 chr13 102464210 102464235 -17820077 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1366 22 0 0 0 chr13 102466794 102466816 -17817496 + AT_rich Low_complexity Low_complexity 1 22 0 6 1366 239 340 26 44 chr13 102468080 102468194 -17816118 + MER91A DNA Tip100 3 114 -82 6 1366 180 0 0 0 chr13 102470945 102470965 -17813347 + (CAA)n Simple_repeat Simple_repeat 2 21 0 6 1366 420 200 22 11 chr13 102471071 102471162 -17813150 + B1F SINE Alu 48 139 -10 6 1366 29 0 0 0 chr13 102471167 102471196 -17813116 + AT_rich Low_complexity Low_complexity 1 29 0 6 1366 270 0 0 0 chr13 102472091 102472121 -17812191 + (A)n Simple_repeat Simple_repeat 1 30 0 6 1366 189 0 0 0 chr13 102473027 102473048 -17811264 + (CAA)n Simple_repeat Simple_repeat 1 21 0 6 1366 347 315 30 39 chr13 102473112 102473343 -17810969 + MLT1B LTR MaLR 35 263 -127 6 1366 263 328 8 33 chr13 102473343 102473463 -17810849 + MLT1B LTR MaLR 213 329 -61 6 1366 1519 58 16 0 chr13 102473588 102473779 -17810533 - B2_Mm2 SINE B2 0 195 2 6 1366 249 83 0 0 chr13 102474509 102474545 -17809767 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 6 1366 2254 255 87 64 chr13 102474545 102475483 -17808829 - RCHARR1 DNA MER1_type -9 965 6 6 1366 509 247 34 17 chr13 102476581 102476738 -17807574 + MER20 DNA MER1_type 2 165 -54 6 1366 186 43 0 0 chr13 102476846 102476869 -17807443 + (CAA)n Simple_repeat Simple_repeat 2 24 0 6 1366 988 169 148 5 chr13 102479223 102479419 -17804893 + URR1B DNA MER1_type 1 224 -1 6 1366 411 113 0 0 chr13 102480400 102480462 -17803850 + (CA)n Simple_repeat Simple_repeat 1 62 0 6 1366 477 172 0 0 chr13 102480462 102480555 -17803757 + (TA)n Simple_repeat Simple_repeat 2 94 0 6 1366 712 206 103 49 chr13 102480590 102480774 -17803538 - B3 SINE B2 0 216 23 6 1366 306 277 9 47 chr13 102481230 102481336 -17802976 + PB1D10 SINE Alu 10 111 -6 6 1366 314 123 18 0 chr13 102481352 102481409 -17802903 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1366 23 54 0 0 chr13 102481861 102481898 -17802414 + AT_rich Low_complexity Low_complexity 1 37 0 6 1366 279 0 0 0 chr13 102482667 102482698 -17801614 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1366 21 0 0 0 chr13 102483394 102483415 -17800897 + AT_rich Low_complexity Low_complexity 1 21 0 6 1366 195 69 0 0 chr13 102484065 102484094 -17800218 + (T)n Simple_repeat Simple_repeat 1 29 0 6 1366 934 245 10 0 chr13 102484196 102484400 -17799912 - B3 SINE B2 -10 206 1 6 1366 323 269 36 113 chr13 102486615 102486741 -17797571 + MLT1A LTR MaLR 1 115 -259 6 1366 339 25 0 0 chr13 102486741 102486781 -17797531 + (TG)n Simple_repeat Simple_repeat 1 40 0 6 1366 323 269 36 113 chr13 102486781 102486822 -17797490 + MLT1A LTR MaLR 116 154 -220 6 1366 240 35 0 0 chr13 102486947 102486976 -17797336 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1366 392 250 40 16 chr13 102487573 102487699 -17796613 - MIRc SINE MIR -70 198 70 6 1366 573 251 113 11 chr13 102488122 102488299 -17796013 + B3 SINE B2 21 215 -1 6 1366 180 111 0 0 chr13 102488330 102488357 -17795955 + (GAA)n Simple_repeat Simple_repeat 3 29 0 6 1366 2116 169 23 30 chr13 102490089 102490521 -17793791 + Lx LINE L1 6213 6641 -13 6 1366 246 62 0 0 chr13 102491077 102491109 -17793203 + (C)n Simple_repeat Simple_repeat 1 32 0 6 1366 375 23 0 0 chr13 102491362 102491406 -17792906 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1366 192 77 0 0 chr13 102491538 102491564 -17792748 + (TCG)n Simple_repeat Simple_repeat 3 28 0 6 1366 1068 45 0 0 chr13 102494527 102494661 -17789651 + (CA)n Simple_repeat Simple_repeat 2 135 0 6 1366 1499 60 16 0 chr13 102495127 102495312 -17789000 + B2_Mm2 SINE B2 1 188 -7 6 1366 22 0 0 0 chr13 102496676 102496698 -17787614 + AT_rich Low_complexity Low_complexity 1 22 0 6 1366 647 304 45 22 chr13 102497083 102497305 -17787007 + B4A SINE B4 3 229 -63 6 1366 831 219 42 5 chr13 102497306 102497499 -17786813 + B3 SINE B2 1 200 -16 6 1366 33 43 0 0 chr13 102497503 102497550 -17786762 + AT_rich Low_complexity Low_complexity 1 47 0 6 1366 233 302 0 16 chr13 102497616 102497680 -17786632 + B4A SINE B4 226 288 -4 6 1367 24 0 0 0 chr13 102498304 102498328 -17785984 + AT_rich Low_complexity Low_complexity 1 24 0 6 1367 197 31 94 0 chr13 102499077 102499109 -17785203 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 6 1367 236 77 0 25 chr13 102499358 102499398 -17784914 + (CA)n Simple_repeat Simple_repeat 1 39 0 6 1367 501 169 31 6 chr13 102499417 102499578 -17784734 + (CA)n Simple_repeat Simple_repeat 1 165 0 6 1367 254 325 12 0 chr13 102500569 102500581 -17783731 - BC1_Mm scRNA scRNA -57 95 51 1 1367 297 246 16 0 chr13 102500581 102500642 -17783670 - ID SINE ID -140 84 23 2 1367 1811 179 93 3 chr13 102500645 102501020 -17783292 + MTD LTR MaLR 3 411 -8 3 1367 358 257 24 89 chr13 102501065 102501189 -17783123 - PB1D10 SINE Alu -1 116 1 4 1367 224 264 19 0 chr13 102501462 102501515 -17782797 + T-rich Low_complexity Low_complexity 2 55 0 5 1367 480 48 0 0 chr13 102501516 102501579 -17782733 + (TCCC)n Simple_repeat Simple_repeat 4 66 0 6 1367 402 227 144 0 chr13 102501690 102501787 -17782525 - B1F2 SINE Alu -10 139 29 7 1367 401 215 54 36 chr13 102501893 102502004 -17782308 + PB1D10 SINE Alu 5 117 0 8 1367 673 157 0 0 chr13 102502011 102502113 -17782199 - Lx9 LINE L1 -374 7270 7169 9 1367 882 188 72 36 chr13 102502110 102502303 -17782009 + Lx9 LINE L1 7275 7474 -170 9 1367 213 108 0 0 chr13 102502307 102502344 -17781968 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1367 390 195 68 0 chr13 102502347 102502465 -17781847 + Lx9 LINE L1 7517 7642 -2 9 1367 763 64 18 0 chr13 102504934 102505044 -17779268 + (CA)n Simple_repeat Simple_repeat 2 113 0 1 1367 427 78 26 0 chr13 102505206 102505283 -17779029 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 1367 276 362 0 59 chr13 102506195 102506246 -17778066 + ID SINE ID 35 77 -147 1 1367 402 259 0 12 chr13 102506246 102506332 -17777980 + B1F SINE Alu 1 85 -64 1 1367 216 0 0 0 chr13 102506332 102506356 -17777956 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1367 342 0 0 0 chr13 102506890 102506928 -17777384 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1367 202 302 20 59 chr13 102507044 102507146 -17777166 - MIRc SINE MIR -120 148 51 1 1367 790 188 0 0 chr13 102508699 102508837 -17775475 - B1_Mus1 SINE Alu -10 138 1 1 1367 24 0 0 0 chr13 102509168 102509192 -17775120 + AT_rich Low_complexity Low_complexity 1 24 0 1 1367 243 0 0 0 chr13 102509873 102509900 -17774412 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1367 339 130 0 0 chr13 102509899 102509953 -17774359 + (GGA)n Simple_repeat Simple_repeat 3 56 0 2 1367 432 98 59 0 chr13 102512225 102512327 -17771985 + (TA)n Simple_repeat Simple_repeat 2 109 0 2 1367 859 114 0 54 chr13 102512339 102512487 -17771825 + B1_Mur4 SINE Alu 11 150 0 2 1367 942 260 30 15 chr13 102513198 102513460 -17770852 + B4 SINE B4 2 267 -25 2 1367 279 0 0 0 chr13 102513460 102513491 -17770821 + (TC)n Simple_repeat Simple_repeat 1 31 0 2 1367 807 57 0 0 chr13 102513491 102513595 -17770717 + (CA)n Simple_repeat Simple_repeat 1 105 0 2 1367 202 97 0 31 chr13 102513811 102513843 -17770469 + (TGGGGG)n Simple_repeat Simple_repeat 2 32 0 2 1367 205 293 188 26 chr13 102513964 102514118 -17770194 + MIR SINE MIR 54 232 -30 2 1367 351 315 19 0 chr13 102515449 102515557 -17768755 - PB1D10 SINE Alu -7 110 1 2 1367 2493 51 67 3 chr13 102517161 102517476 -17766836 + L1Md_F2 LINE L1 5252 5586 -297 3 1367 7849 63 6 19 chr13 102517477 102518485 -17765827 + L1Md_F2 LINE L1 5588 6582 0 3 1367 329 235 12 24 chr13 102518751 102518834 -17765478 + ID4_ SINE ID 2 83 0 3 1367 679 145 6 148 chr13 102520220 102520382 -17763930 + B1_Mus2 SINE Alu 9 147 0 3 1367 223 47 0 85 chr13 102520391 102520438 -17763874 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 3 1367 234 0 0 0 chr13 102521241 102521267 -17763045 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1367 518 224 161 90 chr13 102521307 102521562 -17762750 - MER44A DNA MER2_type -23 316 44 3 1367 700 194 0 8 chr13 102521613 102521743 -17762569 + B3A SINE B2 1 129 -69 3 1367 460 266 0 45 chr13 102522075 102522209 -17762103 + B1_Mur1 SINE Alu 22 149 0 3 1367 253 261 0 0 chr13 102522238 102522284 -17762028 + ID4 SINE ID 28 73 -10 3 1367 21 0 0 0 chr13 102525195 102525216 -17759096 + AT_rich Low_complexity Low_complexity 1 21 0 3 1367 907 83 28 0 chr13 102525621 102525766 -17758546 + (GGAGAA)n Simple_repeat Simple_repeat 3 151 0 4 1367 474 49 0 0 chr13 102525766 102525827 -17758485 + (CAG)n Simple_repeat Simple_repeat 1 61 0 4 1367 751 227 9 206 chr13 102525851 102526084 -17758228 + B3 SINE B2 9 214 -2 4 1367 22 0 0 0 chr13 102527209 102527231 -17757081 + AT_rich Low_complexity Low_complexity 1 22 0 4 1367 294 29 0 0 chr13 102528308 102528343 -17755969 + (TG)n Simple_repeat Simple_repeat 1 35 0 4 1367 246 32 0 0 chr13 102529018 102529049 -17755263 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1367 225 0 0 0 chr13 102529620 102529645 -17754667 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1367 189 0 0 0 chr13 102530659 102530680 -17753632 + (C)n Simple_repeat Simple_repeat 1 21 0 4 1367 181 236 127 0 chr13 102533688 102533743 -17750569 - MIRm SINE MIR -124 152 91 4 1367 252 0 0 0 chr13 102534794 102534822 -17749490 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 4 1367 210 37 0 0 chr13 102534842 102534869 -17749443 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1367 445 313 0 0 chr13 102534887 102535018 -17749294 + ID_B1 SINE B4 86 216 -8 5 1367 209 250 0 0 chr13 102538062 102538102 -17746210 + (CCG)n Simple_repeat Simple_repeat 1 40 0 5 1367 22 35 0 0 chr13 102538179 102538208 -17746104 + GC_rich Low_complexity Low_complexity 1 29 0 5 1367 1294 55 0 6 chr13 102539472 102539638 -17744674 + L1Md_T LINE L1 6418 6582 0 5 1367 1513 57 5 0 chr13 102539661 102539853 -17744459 + L1_Mus1 LINE L1 6375 6567 0 5 1367 291 235 74 0 chr13 102539880 102539961 -17744351 + PB1D10 SINE Alu 5 91 -26 5 1367 778 311 40 33 chr13 102539977 102540253 -17744059 + MTE2a LTR MaLR 89 366 -13 5 1367 550 293 75 31 chr13 102540829 102541083 -17743229 - B4A SINE B4 0 292 28 5 1367 199 336 63 44 chr13 102541226 102541385 -17742927 + MER5A DNA MER1_type 22 183 -6 5 1367 1163 231 102 60 chr13 102541458 102541859 -17742453 - MTD LTR MaLR -1 418 1 6 1367 308 364 8 0 chr13 102542200 102542332 -17741980 + MER5A1 DNA MER1_type 19 151 -15 6 1367 203 314 72 32 chr13 102542343 102542468 -17741844 - MER5A DNA MER1_type -1 188 59 6 1367 409 329 20 7 chr13 102542586 102542739 -17741573 - MER102b DNA MER1_type -110 231 77 6 1367 276 53 0 0 chr13 102542741 102542779 -17741533 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 6 1367 326 262 144 26 chr13 102544145 102544298 -17740014 + L1M5 LINE L1 5263 5433 -746 6 1367 281 249 7 47 chr13 102544298 102544404 -17739908 + L1M5 LINE L1 5665 5769 -393 6 1367 510 46 0 0 chr13 102544426 102544491 -17739821 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1367 226 270 69 20 chr13 102544686 102544788 -17739524 + L1MB4 LINE L1 6070 6176 -4 6 1367 1442 232 74 32 chr13 102544988 102545379 -17738933 + RLTR20B3 LTR ERVK 73 469 -108 6 1367 306 0 0 0 chr13 102545379 102545413 -17738899 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1367 1442 232 74 32 chr13 102545413 102545493 -17738819 + RLTR20B3 LTR ERVK 470 563 -14 6 1367 331 313 54 13 chr13 102545495 102545644 -17738668 + L1ME1 LINE L1 5484 5638 -541 7 1367 1444 252 95 53 chr13 102545644 102546189 -17738123 + RLTR20D LTR ERVK 1 568 0 7 1367 617 322 104 30 chr13 102546191 102546349 -17737963 + L1ME1 LINE L1 5635 5817 -362 7 1367 754 64 0 18 chr13 102546349 102546460 -17737852 + (GAA)n Simple_repeat Simple_repeat 3 111 0 7 1367 617 322 104 30 chr13 102546460 102546774 -17737538 + L1ME1 LINE L1 5818 6142 -37 7 1367 369 179 38 0 chr13 102547114 102547216 -17737096 - B1F SINE Alu -13 107 3 7 1367 282 283 19 19 chr13 102547123 102547231 -17737081 - ID_B1 SINE B4 -48 176 69 7 1367 283 81 31 31 chr13 102549347 102549411 -17734901 + (TTTTTG)n Simple_repeat Simple_repeat 2 65 0 7 1367 215 338 0 12 chr13 102549856 102549937 -17734375 - MIR SINE MIR -51 211 132 7 1367 478 0 0 31 chr13 102550294 102550358 -17733954 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 7 1367 486 49 0 0 chr13 102550416 102550477 -17733835 + (TTGG)n Simple_repeat Simple_repeat 3 63 0 7 1367 220 273 0 35 chr13 102550497 102550554 -17733758 - RSINE1 SINE B4 -22 143 89 7 1367 370 281 47 59 chr13 102551052 102551222 -17733090 - RMER10B LTR ERVL 0 398 231 8 1367 635 147 10 0 chr13 102551459 102551561 -17732751 + LSU-rRNA_Hsa rRNA rRNA 4202 4304 -731 8 1367 378 0 0 0 chr13 102551613 102551655 -17732657 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 8 1367 1117 253 168 110 chr13 102551693 102551776 -17732536 - MYSERV6-int LTR ERVK -2496 3641 3578 8 1367 530 0 31 0 chr13 102551776 102551841 -17732471 + (TTTTA)n Simple_repeat Simple_repeat 2 68 0 8 1367 1151 43 0 0 chr13 102551841 102551979 -17732333 - B1_Mm SINE Alu -9 138 1 8 1367 1431 232 121 111 chr13 102551979 102553285 -17731027 - MYSERV6-int LTR ERVK -275 8684 7977 8 1367 681 171 19 82 chr13 102553285 102553444 -17730868 - B1_Mur3 SINE Alu 0 149 1 8 1367 257 204 14 215 chr13 102553444 102553510 -17730802 - MYSERV6-int LTR ERVK -3876 2261 2214 8 1367 432 159 38 53 chr13 102554164 102554297 -17730015 - MYSERV-int LTR ERVK -1081 5469 5339 8 1367 255 242 10 52 chr13 102554466 102554562 -17729750 - MYSERV6-int LTR ERVK -5150 987 896 8 1367 725 250 18 107 chr13 102555491 102555938 -17728374 - RMER10B LTR ERVL 0 398 7 8 1367 21 57 0 0 chr13 102556482 102556517 -17727795 + AT_rich Low_complexity Low_complexity 1 35 0 8 1367 236 301 40 105 chr13 102556767 102556919 -17727393 - MLT1A0 LTR MaLR -204 161 20 9 1367 237 170 19 0 chr13 102557204 102557257 -17727055 + T-rich Low_complexity Low_complexity 4 57 0 9 1367 500 252 9 0 chr13 102557940 102558047 -17726265 + ORR1E LTR MaLR 6 113 -246 9 1367 24031 160 11 18 chr13 102558077 102559058 -17725254 + L1VL4 LINE L1 699 1681 -4202 9 1367 819 105 177 0 chr13 102559058 102559182 -17725130 + B1_Mus1 SINE Alu 1 146 -2 9 1367 24031 145 17 22 chr13 102559182 102562977 -17721335 + L1VL4 LINE L1 1682 5451 -432 9 1367 3603 50 0 2 chr13 102562989 102563472 -17720840 - L1Md_F2 LINE L1 -567 6017 5536 9 1367 4389 50 0 0 chr13 102563472 102563975 -17720337 + L1Md_F2 LINE L1 6068 6570 -12 9 1367 2457 109 3 0 chr13 102563975 102564315 -17719997 + L1VL4 LINE L1 5450 5790 -93 9 1367 202 358 70 39 chr13 102564457 102564585 -17719727 + MIR SINE MIR 35 166 -96 9 1367 246 222 43 43 chr13 102564635 102564776 -17719536 + (TTATA)n Simple_repeat Simple_repeat 1 141 0 9 1367 569 278 52 32 chr13 102565234 102565445 -17718867 - MTEa LTR MaLR 0 379 170 9 1367 590 265 39 13 chr13 102565798 102565951 -17718361 - MTEa LTR MaLR -218 161 5 9 1367 897 293 164 19 chr13 102566143 102566598 -17717714 + MLT2B4 LTR ERVL 1 523 -33 9 1367 423 0 0 0 chr13 102566598 102566645 -17717667 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1367 897 293 164 19 chr13 102566645 102566672 -17717640 + MLT2B4 LTR ERVL 524 552 -4 9 1367 697 154 0 0 chr13 102568932 102569036 -17715276 + B1_Mus2 SINE Alu 42 145 -2 1 1367 23 78 0 0 chr13 102569303 102569354 -17714958 + AT_rich Low_complexity Low_complexity 1 51 0 1 1367 650 13 13 0 chr13 102571238 102571317 -17712995 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 1367 22 0 0 0 chr13 102571667 102571689 -17712623 + GC_rich Low_complexity Low_complexity 1 22 0 1 1367 27 29 0 0 chr13 102571840 102571874 -17712438 + AT_rich Low_complexity Low_complexity 1 34 0 1 1367 380 233 77 77 chr13 102572640 102572849 -17711463 - L1MC3 LINE L1 -1 7784 7576 1 1367 516 237 20 109 chr13 102572875 102573022 -17711290 - B1F SINE Alu -4 145 12 1 1367 750 228 90 60 chr13 102573050 102573198 -17711114 - L1MC3 LINE L1 -258 7527 7377 1 1367 943 115 13 0 chr13 102573198 102573355 -17710957 + (TC)n Simple_repeat Simple_repeat 1 159 0 1 1367 750 228 90 60 chr13 102573355 102573505 -17710807 - L1MC3 LINE L1 -409 7376 7220 1 1367 30 27 0 0 chr13 102573767 102573804 -17710508 + AT_rich Low_complexity Low_complexity 1 37 0 1 1367 197 281 35 58 chr13 102575421 102575508 -17708804 + MIRc SINE MIR 81 165 -103 1 1367 1357 145 0 42 chr13 102575847 102576085 -17708227 + Lx LINE L1 6426 6653 -1 1 1367 2388 119 9 6 chr13 102577062 102577407 -17706905 - ORR1A1 LTR MaLR 0 346 1 1 1367 917 208 0 0 chr13 102577705 102577854 -17706458 - B1_Mur2 SINE Alu 0 149 1 1 1367 403 227 124 0 chr13 102577854 102577951 -17706361 - PB1D7 SINE Alu 0 120 12 1 1367 1291 138 93 5 chr13 102578166 102578370 -17705942 + URR1A DNA MER1_type 5 226 0 1 1367 594 331 107 4 chr13 102578464 102578716 -17705596 + MLT1E3 LTR MaLR 327 604 -20 1 1367 635 246 196 77 chr13 102579158 102579269 -17705043 + MLT1A0 LTR MaLR 1 152 -213 1 1367 228 35 0 0 chr13 102579269 102579298 -17705014 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1 1367 635 246 196 77 chr13 102579298 102579512 -17704800 + MLT1A0 LTR MaLR 153 365 0 1 1367 1477 85 11 0 chr13 102580228 102580417 -17703895 - B2_Mm1t SINE B2 -1 192 2 1 1367 351 276 110 110 chr13 102580977 102581404 -17702908 + Arthur1 DNA Tip100 3518 3944 -3 1 1367 279 0 0 0 chr13 102582479 102582510 -17701802 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1367 253 346 28 46 chr13 102583363 102583472 -17700840 - LTR78 LTR ERV1 -353 951 845 1 1367 611 274 69 19 chr13 102584138 102584399 -17699913 - L1MC5 LINE L1 -59 7902 7629 1 1367 299 237 40 0 chr13 102584638 102584714 -17699598 - MIRb SINE MIR -84 184 106 1 1367 375 260 13 0 chr13 102584907 102584984 -17699328 - ID4_ SINE ID 0 83 6 1 1367 772 291 137 61 chr13 102585071 102585903 -17698409 + L1MEe LINE L1 263 1157 -3697 1 1367 238 263 0 0 chr13 102585994 102586051 -17698261 - MER5A DNA MER1_type -6 183 127 1 1367 8027 82 19 8 chr13 102586053 102587946 -17696366 + L1VL2 LINE L1 123 2040 -1575 1 1367 183 317 48 48 chr13 102588451 102588577 -17695735 - MIRc SINE MIR -36 232 107 1 1367 794 266 57 25 chr13 102588764 102589169 -17695143 - L1M3 LINE L1 -1464 4676 4259 1 1367 417 86 0 0 chr13 102589188 102589246 -17695066 + (GA)n Simple_repeat Simple_repeat 2 59 0 1 1367 249 313 0 0 chr13 102589246 102589313 -17694999 - MER5A DNA MER1_type -51 138 72 1 1367 441 0 0 0 chr13 102589406 102589455 -17694857 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1367 708 333 46 49 chr13 102589926 102590251 -17694061 + ORR1E LTR MaLR 1 324 -35 1 1367 2332 128 51 19 chr13 102590255 102590629 -17693683 - ORR1B1 LTR MaLR -8 386 1 1 1367 2198 94 45 0 chr13 102590753 102591040 -17693272 + L1Md_T LINE L1 6283 6582 0 1 1367 188 328 0 0 chr13 102592728 102592786 -17691526 - L2a LINE L2 -8 3418 3361 1 1367 1095 114 0 0 chr13 102592965 102593140 -17691172 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 1 1367 614 316 181 57 chr13 102593682 102594316 -17689996 + Charlie1a DNA MER1_type 395 1107 -348 1 1367 750 269 73 24 chr13 102594418 102594624 -17689688 - B3A SINE B2 0 216 1 1 1367 328 310 18 94 chr13 102594670 102594841 -17689471 + MER20 DNA MER1_type 2 159 -60 1 1367 2132 127 15 12 chr13 102594951 102595279 -17689033 + ORR1A4 LTR MaLR 1 329 0 1 1367 217 176 39 0 chr13 102595546 102595597 -17688715 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1367 706 296 12 12 chr13 102595597 102595761 -17688551 - RSINE1 SINE B4 0 165 2 1 1367 23 54 0 0 chr13 102595770 102595807 -17688505 + AT_rich Low_complexity Low_complexity 1 37 0 1 1367 183 42 0 0 chr13 102596181 102596205 -17688107 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1 1367 428 289 31 15 chr13 102596837 102596967 -17687345 + RCHARR1 DNA MER1_type 3 134 -840 1 1367 1768 270 83 20 chr13 102597037 102597582 -17686730 - Lx8 LINE L1 -465 7008 6430 1 1367 407 18 0 35 chr13 102597918 102597975 -17686337 + (CAAAA)n Simple_repeat Simple_repeat 3 57 0 1 1367 937 51 0 0 chr13 102598155 102598273 -17686039 + L1_Mus2 LINE L1 6449 6566 0 1 1367 24 53 0 0 chr13 102598308 102598346 -17685966 + AT_rich Low_complexity Low_complexity 1 38 0 1 1367 227 200 31 77 chr13 102598637 102598702 -17685610 + RMER15 LTR ERVL 337 398 -177 1 1367 2329 66 6 9 chr13 102598731 102599052 -17685260 - ORR1A4 LTR MaLR -9 320 1 1 1367 385 343 15 0 chr13 102599061 102599195 -17685117 + RMER15 LTR ERVL 425 560 -15 1 1367 912 148 0 45 chr13 102599681 102599837 -17684475 + B1_Mur3 SINE Alu 1 149 0 1 1367 609 299 111 20 chr13 102600997 102601338 -17682974 + MER57E1 LTR ERV1 1 372 0 1 1367 393 285 162 20 chr13 102602348 102602552 -17681760 + MIRb SINE MIR 10 242 -26 1 1367 688 222 74 0 chr13 102602610 102602745 -17681567 + B1_Mus2 SINE Alu 2 146 -1 1 1367 243 186 20 10 chr13 102603617 102603715 -17680597 + (TA)n Simple_repeat Simple_repeat 2 100 0 1 1367 310 163 24 84 chr13 102603748 102603915 -17680397 + (TATAA)n Simple_repeat Simple_repeat 1 157 0 1 1367 551 115 43 7 chr13 102603928 102604068 -17680244 + (TA)n Simple_repeat Simple_repeat 1 145 0 1 1367 28 29 0 0 chr13 102606813 102606848 -17677464 + AT_rich Low_complexity Low_complexity 1 35 0 1 1367 291 294 10 61 chr13 102607520 102607618 -17676694 + MIRb SINE MIR 97 189 -79 1 1367 473 302 0 0 chr13 102608430 102608546 -17675766 - ORR1E LTR MaLR -241 118 3 1 1367 222 118 0 0 chr13 102610318 102610352 -17673960 + (TAATG)n Simple_repeat Simple_repeat 2 35 0 1 1367 307 200 92 13 chr13 102612996 102613072 -17671240 + ID4 SINE ID 1 82 -1 1 1367 458 296 120 69 chr13 102613691 102614133 -17670179 - MLT1C LTR MaLR -10 457 1 1 1367 360 0 0 0 chr13 102615519 102615559 -17668753 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1367 322 238 38 0 chr13 102615597 102615677 -17668635 - B4A SINE B4 -16 276 194 1 1367 225 310 0 27 chr13 102616593 102616666 -17667646 + ID4_ SINE ID 12 82 -1 1 1367 595 308 33 0 chr13 102616777 102616991 -17667321 - ID_B1 SINE B4 -3 221 1 1 1367 280 255 14 0 chr13 102617380 102617462 -17666850 + MIR SINE MIR 117 204 -64 1 1367 369 93 0 0 chr13 102618449 102618503 -17665809 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1367 209 139 23 0 chr13 102618934 102618977 -17665335 + GA-rich Low_complexity Low_complexity 1 44 0 1 1367 301 303 96 11 chr13 102619449 102619636 -17664676 + L1MC4a LINE L1 7670 7872 -10 1 1367 751 196 7 20 chr13 102619749 102619900 -17664412 + B1_Mur2 SINE Alu 1 149 0 1 1367 221 176 14 42 chr13 102619900 102619965 -17664347 + A-rich Low_complexity Low_complexity 7 69 0 1 1367 1198 88 16 5 chr13 102620236 102620420 -17663892 - B2_Mm2 SINE B2 -1 194 9 1 1367 402 21 0 0 chr13 102621682 102621729 -17662583 + (TA)n Simple_repeat Simple_repeat 2 48 0 1 1367 1169 226 164 106 chr13 102622183 102622599 -17661713 + MT2A LTR ERVL 4 443 -90 1 1367 203 203 14 0 chr13 102622615 102622689 -17661623 + (TA)n Simple_repeat Simple_repeat 1 75 0 1 1367 34 79 0 0 chr13 102622693 102622769 -17661543 + AT_rich Low_complexity Low_complexity 1 76 0 1 1367 188 262 0 0 chr13 102622786 102622828 -17661484 + MIR SINE MIR 197 238 -24 1 1367 256 153 269 8 chr13 102623507 102623626 -17660686 - Lx9 LINE L1 0 7644 7495 1 1367 1920 196 15 13 chr13 102623593 102623991 -17660321 + Lx9 LINE L1 6755 7260 -384 1 1367 731 269 80 20 chr13 102624114 102624364 -17659948 - B4A SINE B4 -22 270 6 1 1367 280 233 23 23 chr13 102624448 102624536 -17659776 - L1MA10 LINE L1 -46 6288 6201 1 1367 1316 215 9 58 chr13 102624665 102625010 -17659302 - L1ME2 LINE L1 -275 5889 5562 1 1367 191 241 50 33 chr13 102626525 102626585 -17657727 + MIRb SINE MIR 64 124 -144 1 1367 1073 192 23 9 chr13 102626711 102626932 -17657380 + MTD LTR MaLR 13 236 -183 1 1367 428 311 66 18 chr13 102626931 102627098 -17657214 + B4A SINE B4 112 286 -6 1 1367 488 59 15 0 chr13 102627126 102627194 -17657118 + (CA)n Simple_repeat Simple_repeat 1 69 0 1 1367 491 216 39 10 chr13 102627284 102627387 -17656925 - B1F2 SINE Alu -37 112 7 1 1367 185 273 143 33 chr13 102627407 102627498 -17656814 + MIRb SINE MIR 110 210 -58 1 1367 215 357 30 10 chr13 102628633 102628732 -17655580 + MIRb SINE MIR 47 147 -121 1 1368 297 0 0 0 chr13 102630263 102630296 -17654016 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1368 21 0 0 0 chr13 102630355 102630376 -17653936 + AT_rich Low_complexity Low_complexity 1 21 0 1 1368 324 0 0 0 chr13 102631644 102631680 -17652632 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1368 382 229 107 62 chr13 102632719 102632831 -17651481 + PB1D10 SINE Alu 8 124 -3 1 1368 221 0 0 33 chr13 102633548 102633578 -17650734 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1 1368 235 250 92 127 chr13 102634464 102634606 -17649706 - MLT1N2 LTR MaLR -418 144 8 1 1368 676 347 89 23 chr13 102634760 102635243 -17649069 - MLT2B2 LTR ERVL 0 515 1 1 1368 1100 168 113 0 chr13 102635278 102635481 -17648831 - URR1A DNA MER1_type 0 226 1 2 1368 1044 276 78 3 chr13 102635502 102635836 -17648476 + Lx8 LINE L1 6596 6954 -519 2 1368 1326 249 104 17 chr13 102635901 102636257 -17648055 + Lx8 LINE L1 7074 7460 -13 2 1368 183 42 0 0 chr13 102636328 102636352 -17647960 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 1368 22 0 0 0 chr13 102636473 102636495 -17647817 + AT_rich Low_complexity Low_complexity 1 22 0 2 1368 3882 70 61 7 chr13 102637222 102638071 -17646241 - L1_Mus3 LINE L1 0 6582 5658 2 1368 207 312 11 11 chr13 102638241 102638335 -17645977 + L2a LINE L2 3332 3425 -1 2 1368 862 278 159 11 chr13 102638790 102639338 -17644974 - MLT1E3 LTR MaLR -2 652 6 2 1368 395 324 57 44 chr13 102640734 102640963 -17643349 - MIR SINE MIR -19 243 12 2 1368 570 22 67 0 chr13 102641222 102641311 -17643001 + (TCTCTG)n Simple_repeat Simple_repeat 2 96 0 2 1368 1091 79 7 0 chr13 102641316 102641456 -17642856 - B1_Mus1 SINE Alu -7 141 1 2 1368 201 318 59 0 chr13 102642592 102642677 -17641635 - L2a LINE L2 -55 3371 3282 2 1368 2902 76 5 8 chr13 102643085 102643471 -17640841 - L1_Mus3 LINE L1 -92 6546 6162 2 1368 840 182 222 0 chr13 102643539 102643715 -17640597 - B3 SINE B2 0 216 2 2 1368 1168 81 115 11 chr13 102643717 102643891 -17640421 - B2_Mm2 SINE B2 -2 193 2 2 1368 421 259 46 0 chr13 102643903 102644011 -17640301 - PB1D10 SINE Alu 0 117 5 2 1368 216 0 0 0 chr13 102644237 102644261 -17640051 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1368 23 54 0 0 chr13 102644347 102644384 -17639928 + AT_rich Low_complexity Low_complexity 1 37 0 2 1368 462 88 0 0 chr13 102644421 102644489 -17639823 + (TG)n Simple_repeat Simple_repeat 1 68 0 2 1368 304 315 71 9 chr13 102644502 102644614 -17639698 - RSINE1 SINE B4 -18 147 29 2 1368 194 0 39 0 chr13 102644614 102644640 -17639672 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 2 1368 3033 283 101 43 chr13 102644883 102646483 -17637829 + Lx8 LINE L1 5453 7151 -322 2 1368 2677 235 41 10 chr13 102646766 102647351 -17636961 + RMER1A Other Other 143 745 -285 2 1368 441 147 65 47 chr13 102647347 102647454 -17636858 + RMER1A Other Other 922 1030 0 2 1368 267 244 111 44 chr13 102647509 102647599 -17636713 + L1MC1 LINE L1 6133 6228 -105 2 1368 2216 187 69 24 chr13 102647774 102648278 -17636034 + RLTR11A2 LTR ERVK 1 527 0 2 1368 338 305 155 73 chr13 102648377 102648745 -17635567 + MLT1C LTR MaLR 62 459 -8 2 1368 595 207 118 30 chr13 102649550 102649719 -17634593 + CR1_Mam LINE CR1 1196 1379 -825 2 1368 261 0 0 0 chr13 102650974 102651003 -17633309 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1368 578 229 0 7 chr13 102651003 102651157 -17633155 + (TA)n Simple_repeat Simple_repeat 2 154 0 2 1368 240 257 14 28 chr13 102651873 102651945 -17632367 + ID4_ SINE ID 13 83 0 2 1368 342 123 0 0 chr13 102652746 102652803 -17631509 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1368 264 133 100 0 chr13 102652885 102652945 -17631367 - ORR1D2 LTR MaLR 0 370 305 2 1368 186 209 0 0 chr13 102652948 102652991 -17631321 + GA-rich Low_complexity Low_complexity 2 44 0 2 1368 1347 72 0 0 chr13 102652992 102653172 -17631140 + (GAA)n Simple_repeat Simple_repeat 1 180 0 2 1368 582 250 21 124 chr13 102653172 102653405 -17630907 - ORR1D2 LTR MaLR -56 314 106 2 1368 542 327 107 7 chr13 102653743 102654042 -17630270 + Tigger7 DNA MER2_type 10 338 -2153 2 1368 249 244 144 0 chr13 102654120 102654210 -17630102 + Tigger7 DNA MER2_type 2385 2487 -4 2 1368 532 89 63 0 chr13 102655842 102655921 -17628391 - B1_Mus2 SINE Alu -5 142 59 2 1368 229 344 10 0 chr13 102656334 102656430 -17627882 + MIR SINE MIR 45 141 -67 2 1368 320 290 28 0 chr13 102657480 102657587 -17626725 - PB1D10 SINE Alu -7 110 1 2 1368 483 185 21 21 chr13 102658150 102658244 -17626068 - RLTR20B2 LTR ERVK 0 563 470 2 1368 510 114 0 0 chr13 102658244 102658323 -17625989 + (CATA)n Simple_repeat Simple_repeat 4 82 0 2 1368 1926 119 3 102 chr13 102658328 102658682 -17625630 - ORR1A2 LTR MaLR -8 319 1 2 1368 1582 193 103 30 chr13 102658682 102659107 -17625205 - RLTR20B2 LTR ERVK -103 457 2 2 1368 2334 259 87 30 chr13 102659108 102660004 -17624308 - RCHARR1 DNA MER1_type -27 947 1 2 1368 240 270 78 39 chr13 102660202 102660279 -17624033 - L2b LINE L2 -9 3366 3287 2 1368 343 305 0 0 chr13 102660458 102660553 -17623759 + L2a LINE L2 3327 3421 -5 2 1368 487 274 76 70 chr13 102660646 102661015 -17623297 + L1MA9 LINE L1 5766 6136 -176 2 1368 3806 53 2 0 chr13 102662558 102663027 -17621285 + L1Md_F2 LINE L1 6113 6582 0 2 1368 218 295 39 0 chr13 102663344 102663422 -17620890 - ID4 SINE ID 0 83 3 2 1368 693 311 77 18 chr13 102663697 102663969 -17620343 - B4A SINE B4 -4 288 1 2 1368 280 316 32 0 chr13 102663969 102664064 -17620248 - B1F1 SINE Alu -51 98 1 2 1368 182 65 0 61 chr13 102666364 102666397 -17617915 + (TCTCTG)n Simple_repeat Simple_repeat 6 36 0 2 1368 900 158 0 7 chr13 102666689 102666836 -17617476 + B1_Mus2 SINE Alu 2 147 0 2 1368 324 302 28 0 chr13 102666901 102667007 -17617305 + L1MCa LINE L1 483 591 -5917 2 1368 753 133 0 45 chr13 102667628 102667762 -17616550 - B1_Mur3 SINE Alu -1 148 21 2 1368 21 0 0 0 chr13 102668181 102668202 -17616110 + AT_rich Low_complexity Low_complexity 1 21 0 2 1368 307 172 109 0 chr13 102668452 102668516 -17615796 + ID4_ SINE ID 2 72 -11 2 1368 396 0 0 0 chr13 102668987 102669031 -17615281 + (CA)n Simple_repeat Simple_repeat 1 44 0 2 1368 486 98 0 0 chr13 102669031 102669113 -17615199 + (GA)n Simple_repeat Simple_repeat 1 82 0 2 1368 712 306 24 12 chr13 102669113 102669361 -17614951 - Lx9 LINE L1 -186 7458 7208 2 1368 1247 107 31 31 chr13 102670609 102670802 -17613510 - B2_Mm2 SINE B2 0 195 3 2 1368 1036 79 23 41 chr13 102671156 102671463 -17612849 + L1_Mus3 LINE L1 6467 6638 0 2 1368 239 299 168 18 chr13 102672958 102673125 -17611187 - L3 LINE CR1 -464 4025 3834 2 1368 404 357 123 23 chr13 102673358 102673756 -17610556 - L2a LINE L2 -1 3425 2988 2 1368 445 362 132 24 chr13 102673761 102674010 -17610302 + B4 SINE B4 3 278 -14 2 1368 405 0 0 0 chr13 102674036 102674081 -17610231 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1368 304 289 87 118 chr13 102674138 102674275 -17610037 - L2a LINE L2 -1399 2020 1886 2 1368 271 227 12 118 chr13 102674275 102674360 -17609952 - ID4 SINE ID -7 76 1 2 1368 304 289 87 118 chr13 102674360 102674509 -17609803 - L2a LINE L2 -1534 1885 1743 2 1368 289 317 105 0 chr13 102674616 102674792 -17609520 - L2a LINE L2 -30 3396 3178 2 1368 1748 141 164 60 chr13 102675389 102675737 -17608575 + ORR1C2 LTR MaLR 1 384 0 2 1368 1077 157 3 6 chr13 102676676 102677015 -17607297 + (CA)n Simple_repeat Simple_repeat 1 337 0 2 1368 204 40 0 0 chr13 102677362 102677387 -17606925 + (CACAT)n Simple_repeat Simple_repeat 5 29 0 2 1368 304 330 146 36 chr13 102678168 102678388 -17605924 - MLT2E LTR ERVL -364 264 21 2 1368 831 289 77 6 chr13 102678426 102678750 -17605562 + MLT1B LTR MaLR 44 390 0 2 1368 292 358 27 26 chr13 102678860 102679036 -17605276 - MIR SINE MIR -89 179 3 2 1368 1462 194 85 3 chr13 102679777 102680107 -17604205 + ORR1D1-int LTR MaLR 1014 1370 0 2 1368 736 274 151 105 chr13 102680113 102680287 -17604025 + ORR1D1 LTR MaLR 8 166 -208 2 1368 299 23 47 0 chr13 102680287 102680330 -17603982 + (TCTCTG)n Simple_repeat Simple_repeat 4 48 0 2 1368 736 274 151 105 chr13 102680330 102680506 -17603806 + ORR1D1 LTR MaLR 167 374 0 2 1368 1286 144 46 5 chr13 102681161 102681377 -17602935 - URR1B DNA MER1_type 0 225 1 2 1368 290 303 0 0 chr13 102681745 102681821 -17602491 - PB1D10 SINE Alu -2 115 40 2 1368 195 204 0 0 chr13 102682465 102682509 -17601803 + GA-rich Low_complexity Low_complexity 5 48 0 2 1368 521 230 54 7 chr13 102682928 102683077 -17601235 - MER2 DNA MER2_type -63 282 127 2 1368 324 310 24 22 chr13 102683222 102683289 -17601023 - MLT1F2 LTR MaLR -407 162 97 2 1368 296 244 38 13 chr13 102683289 102683368 -17600944 + ID4_ SINE ID 1 81 -2 2 1368 324 294 39 23 chr13 102683368 102683455 -17600857 - MLT1F2 LTR MaLR -463 97 7 2 1368 198 0 0 0 chr13 102683709 102683731 -17600581 + (CAAAG)n Simple_repeat Simple_repeat 1 22 0 2 1368 1150 137 56 91 chr13 102683841 102684073 -17600239 + URR1B DNA MER1_type 2 225 0 2 1368 1076 251 154 30 chr13 102684080 102684417 -17599895 + MTE2a LTR MaLR 1 379 0 2 1368 207 104 41 20 chr13 102685240 102685289 -17599023 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1368 647 122 40 17 chr13 102685311 102685486 -17598826 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1368 1065 145 0 0 chr13 102686734 102686913 -17597399 + (TTC)n Simple_repeat Simple_repeat 2 180 0 2 1368 24 0 0 0 chr13 102687352 102687376 -17596936 + AT_rich Low_complexity Low_complexity 1 24 0 2 1368 190 333 126 0 chr13 102688718 102688829 -17595483 + L2a LINE L2 3297 3421 -5 2 1368 333 100 0 0 chr13 102690021 102690071 -17594241 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1368 210 71 0 0 chr13 102690892 102690920 -17593392 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 2 1368 2175 164 24 151 chr13 102691213 102691724 -17592588 + RLTR41 LTR ERV1 1 446 0 2 1368 2210 100 21 39 chr13 102692790 102693123 -17591189 - ORR1A2 LTR MaLR 0 327 1 2 1368 315 317 156 17 chr13 102693852 102694083 -17590229 + MLT1A1 LTR MaLR 75 337 -71 2 1368 238 322 78 0 chr13 102695646 102695761 -17588551 - ORR1E LTR MaLR -214 145 22 2 1368 351 0 0 0 chr13 102695893 102695932 -17588380 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1368 431 343 28 34 chr13 102696130 102696450 -17587862 + L1MB8 LINE L1 5817 6134 -44 2 1368 294 29 0 0 chr13 102696604 102696639 -17587673 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1368 411 134 0 0 chr13 102697678 102697760 -17586552 + (TC)n Simple_repeat Simple_repeat 2 83 0 2 1368 303 230 0 0 chr13 102697868 102697981 -17586331 + (CA)n Simple_repeat Simple_repeat 2 114 0 2 1368 346 360 0 0 chr13 102698015 102698193 -17586119 + (CA)n Simple_repeat Simple_repeat 1 178 0 2 1368 216 216 0 0 chr13 102698243 102698294 -17586018 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1368 2137 170 16 11 chr13 102698409 102698790 -17585522 + ORR1B1 LTR MaLR 4 386 -8 2 1368 239 313 125 13 chr13 102699069 102699221 -17585091 - MER5A DNA MER1_type -2 187 19 2 1368 360 0 0 0 chr13 102699289 102699329 -17584983 + (TC)n Simple_repeat Simple_repeat 2 41 0 2 1368 279 133 0 0 chr13 102699329 102699374 -17584938 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1368 251 275 0 14 chr13 102700322 102700392 -17583920 - L1M5 LINE L1 -337 5836 5768 3 1368 370 309 27 44 chr13 102700462 102700645 -17583667 - L1M5 LINE L1 -534 5639 5460 3 1368 204 98 77 19 chr13 102700649 102700701 -17583611 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 3 1368 489 297 54 21 chr13 102700870 102701111 -17583201 - L1M5 LINE L1 -1016 5130 4882 3 1368 261 154 0 37 chr13 102701276 102701330 -17582982 - RMER30 DNA MER1_type -28 174 123 3 1368 519 244 101 22 chr13 102701343 102701475 -17582837 + RSINE1 SINE B4 4 147 -18 3 1368 279 0 0 0 chr13 102701475 102701506 -17582806 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1368 266 279 12 0 chr13 102702163 102702249 -17582063 - MLT1E2 LTR MaLR -2 625 539 3 1368 254 232 0 18 chr13 102702372 102702429 -17581883 + CT-rich Low_complexity Low_complexity 4 59 0 3 1368 197 33 0 32 chr13 102702788 102702819 -17581493 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 3 1368 618 163 21 62 chr13 102702868 102703012 -17581300 + B1_Mus2 SINE Alu 2 139 -8 3 1368 234 152 0 0 chr13 102705522 102705581 -17578731 + A-rich Low_complexity Low_complexity 2 60 0 3 1368 193 357 0 23 chr13 102709107 102709193 -17575119 - MIR3 SINE MIR -116 92 9 3 1368 239 283 86 26 chr13 102709662 102709778 -17574534 + MLT1A LTR MaLR 1 123 -251 3 1368 1434 287 25 12 chr13 102709832 102710231 -17574081 - MTD LTR MaLR -15 404 1 3 1368 290 267 101 26 chr13 102710231 102710391 -17573921 + MLT1A-int LTR MaLR 107 365 -1370 3 1368 253 297 0 0 chr13 102710498 102710572 -17573740 + MLT1A-int LTR MaLR 967 1040 -331 3 1368 1289 235 150 10 chr13 102710665 102711078 -17573234 + Lx7 LINE L1 1783 2253 -3627 3 1368 1494 185 35 7 chr13 102711096 102711385 -17572927 - RMER19C LTR ERVK 0 611 315 3 1368 705 266 10 5 chr13 102711385 102711589 -17572723 + Lx7 LINE L1 2311 2515 -3365 3 1368 267 114 0 0 chr13 102711592 102711637 -17572675 - MT2A LTR ERVL -3 560 491 3 1368 254 208 0 27 chr13 102711659 102711733 -17572579 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 3 1368 2137 219 19 21 chr13 102711734 102712128 -17572184 - MT2A LTR ERVL -50 483 85 3 1368 342 0 0 0 chr13 102712128 102712166 -17572146 + (CAA)n Simple_repeat Simple_repeat 2 39 0 3 1368 2137 219 19 21 chr13 102712166 102712255 -17572057 - MT2A LTR ERVL -449 84 1 3 1368 5525 228 18 18 chr13 102712273 102713537 -17570775 + Lx7 LINE L1 4661 5919 -1777 3 1368 477 0 0 0 chr13 102713537 102713590 -17570722 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1368 5525 265 60 23 chr13 102713590 102714919 -17569393 + Lx7 LINE L1 5920 7311 -385 3 1368 966 112 0 0 chr13 102715023 102715201 -17569111 + (GA)n Simple_repeat Simple_repeat 1 178 0 3 1368 276 155 162 20 chr13 102715201 102715300 -17569012 + Lx8 LINE L1 7359 7471 -2 3 1368 216 0 0 0 chr13 102715341 102715365 -17568947 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1368 409 17 35 0 chr13 102716820 102716878 -17567434 + (CAA)n Simple_repeat Simple_repeat 2 61 0 3 1368 273 145 0 0 chr13 102717228 102717290 -17567022 + (TCTCTG)n Simple_repeat Simple_repeat 4 65 0 3 1368 206 79 53 0 chr13 102718796 102718834 -17565478 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 3 1368 336 331 86 7 chr13 102718842 102718994 -17565318 + MER20 DNA MER1_type 29 192 -27 3 1368 1389 61 0 0 chr13 102721549 102721729 -17562583 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 3 1368 740 111 8 0 chr13 102721746 102721863 -17562449 + (TCC)n Simple_repeat Simple_repeat 3 120 0 3 1368 538 292 0 0 chr13 102722990 102723110 -17561202 - ID_B1 SINE B4 -11 213 94 3 1368 624 182 198 0 chr13 102723950 102724071 -17560241 - B1_Mus1 SINE Alu 0 148 4 3 1368 309 26 0 0 chr13 102724122 102724160 -17560152 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1368 449 363 0 0 chr13 102724191 102724326 -17559986 - B4A SINE B4 -5 287 153 3 1368 190 361 92 23 chr13 102725443 102725616 -17558696 + MIR3 SINE MIR 9 193 -15 3 1368 400 196 176 0 chr13 102725893 102726049 -17558263 + MER58A DNA MER1_type 33 224 0 3 1368 189 267 65 65 chr13 102726422 102726514 -17557798 + L2 LINE L2 2791 2882 -537 3 1368 789 294 55 52 chr13 102728296 102728370 -17555942 - L1MC2 LINE L1 -236 6108 6047 3 1368 858 122 0 0 chr13 102728370 102728509 -17555803 + (CATA)n Simple_repeat Simple_repeat 4 142 0 3 1368 789 294 55 52 chr13 102728509 102728779 -17555533 - L1MC2 LINE L1 -298 6046 5763 3 1368 1082 157 21 5 chr13 102728783 102728969 -17555343 - URR1A DNA MER1_type -2 224 36 3 1368 698 186 8 0 chr13 102728969 102729087 -17555225 - URR1A DNA MER1_type -107 119 1 3 1368 1089 280 98 0 chr13 102729093 102729461 -17554851 - L1MC2 LINE L1 -584 5760 5357 3 1368 1171 43 43 7 chr13 102729529 102729670 -17554642 + B1_Mm SINE Alu 2 147 0 3 1368 498 108 0 0 chr13 102729673 102729756 -17554556 + (GAAAA)n Simple_repeat Simple_repeat 2 84 0 3 1368 286 266 131 94 chr13 102729832 102730023 -17554289 - ORR1E LTR MaLR -105 254 57 3 1368 2343 111 12 26 chr13 102731068 102731410 -17552902 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1368 16630 52 33 26 chr13 102731412 102733577 -17550735 + IAPEz-int LTR ERVK 3 2171 -4310 3 1368 550 91 0 0 chr13 102733571 102733648 -17550664 + IAPEz-int LTR ERVK 2698 2774 -3707 3 1368 2540 18 0 0 chr13 102733664 102733948 -17550364 + IAPEz-int LTR ERVK 4074 4357 -2124 3 1368 5977 60 13 18 chr13 102733939 102734714 -17549598 + IAPEz-int LTR ERVK 5709 6479 -2 3 1368 2343 111 12 26 chr13 102734716 102735058 -17549254 + IAPLTR1a_Mm LTR ERVK 1 337 0 3 1368 205 86 0 28 chr13 102738570 102738606 -17545706 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 3 1368 3463 56 2 0 chr13 102738701 102739096 -17545216 - MTA_Mm LTR MaLR 0 396 1 3 1368 11515 35 4 7 chr13 102739127 102741253 -17543059 - L1Md_F3 LINE L1 0 6584 4495 3 1368 420 71 0 0 chr13 102741545 102741601 -17542711 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 3 1368 995 116 54 0 chr13 102741601 102741748 -17542564 - B2_Mm2 SINE B2 -40 155 1 3 1368 824 217 55 68 chr13 102742492 102742784 -17541528 + Lx9 LINE L1 7357 7644 0 3 1368 298 327 48 9 chr13 102743779 102743884 -17540428 + MIR SINE MIR 9 117 -145 3 1368 675 228 0 0 chr13 102743923 102744103 -17540209 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1368 258 250 0 0 chr13 102744115 102744187 -17540125 + (TG)n Simple_repeat Simple_repeat 1 72 0 3 1368 214 362 17 0 chr13 102744232 102744290 -17540022 - ID4 SINE ID -22 61 3 3 1368 489 291 22 15 chr13 102744297 102744433 -17539879 - B1F1 SINE Alu 0 149 13 3 1368 240 262 36 72 chr13 102744345 102744456 -17539856 - MT2B2 LTR ERVL -330 254 148 3 1368 1120 111 0 11 chr13 102744751 102744933 -17539379 + (GGGAGA)n Simple_repeat Simple_repeat 1 180 0 3 1368 194 91 30 0 chr13 102745307 102745340 -17538972 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 3 1368 866 222 21 73 chr13 102745520 102745753 -17538559 - MTE2a LTR MaLR -4 375 155 3 1368 1044 148 191 0 chr13 102745762 102745951 -17538361 - URR1A DNA MER1_type -1 225 1 3 1368 711 159 0 45 chr13 102745959 102746091 -17538221 + B1_Mur4 SINE Alu 18 143 -7 3 1368 213 132 0 0 chr13 102746108 102746146 -17538166 + (TAAG)n Simple_repeat Simple_repeat 2 39 0 3 1368 471 280 91 0 chr13 102746174 102746306 -17538006 - MTE2a LTR MaLR -235 144 1 3 1368 432 0 0 0 chr13 102746539 102746587 -17537725 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1368 1031 191 127 0 chr13 102746599 102746788 -17537524 + B3 SINE B2 4 216 0 3 1368 22 0 0 0 chr13 102747154 102747176 -17537136 + AT_rich Low_complexity Low_complexity 1 22 0 3 1368 379 222 0 100 chr13 102747440 102747540 -17536772 + PB1D10 SINE Alu 17 106 -11 3 1368 180 97 0 0 chr13 102747540 102747571 -17536741 + (CCAA)n Simple_repeat Simple_repeat 1 31 0 3 1368 1167 102 0 0 chr13 102749358 102749505 -17534807 + B1_Mm SINE Alu 1 147 0 3 1368 2141 179 128 0 chr13 102749585 102750054 -17534258 - Lx9 LINE L1 0 7644 7116 3 1368 282 73 0 0 chr13 102750078 102750119 -17534193 + (GA)n Simple_repeat Simple_repeat 2 42 0 3 1368 467 324 0 0 chr13 102750961 102751069 -17533243 - PB1D10 SINE Alu -9 108 1 3 1368 1235 265 66 14 chr13 102751466 102751834 -17532478 + Lx8 LINE L1 6579 6981 -492 3 1368 808 174 65 1 chr13 102751834 102751974 -17532338 - ORR1C2 LTR MaLR 0 384 177 3 1368 491 0 17 0 chr13 102751974 102752033 -17532279 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1368 808 209 21 85 chr13 102752033 102752198 -17532114 - ORR1C2 LTR MaLR -208 176 21 3 1368 516 298 73 39 chr13 102752201 102752379 -17531933 + Lx8 LINE L1 6975 7158 -315 3 1368 2500 167 142 79 chr13 102752901 102753550 -17530762 - RMER6C LTR ERVK 0 690 1 3 1368 912 105 6 28 chr13 102753574 102753739 -17530573 + (TCC)n Simple_repeat Simple_repeat 2 162 0 3 1368 1153 90 6 6 chr13 102753739 102753917 -17530395 + (TTC)n Simple_repeat Simple_repeat 1 178 0 3 1368 912 105 6 28 chr13 102753917 102753928 -17530384 + (TCC)n Simple_repeat Simple_repeat 3 13 0 3 1368 326 355 50 0 chr13 102754252 102754393 -17529919 - MIR SINE MIR -114 148 1 3 1368 242 248 125 55 chr13 102754448 102754576 -17529736 - L2a LINE L2 -33 3393 3257 3 1368 2363 153 28 3 chr13 102755726 102756087 -17528225 + Lx4A LINE L1 6689 7058 0 3 1368 396 59 0 0 chr13 102756124 102756175 -17528137 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1368 287 285 70 107 chr13 102756303 102756576 -17527736 + Charlie4a DNA MER1_type 64 326 -182 3 1368 741 269 54 19 chr13 102756576 102756781 -17527531 + B3 SINE B2 5 216 0 3 1368 287 285 70 107 chr13 102756781 102756919 -17527393 + Charlie4a DNA MER1_type 327 460 -48 3 1368 568 290 19 0 chr13 102757186 102757341 -17526971 - RSINE1 SINE B4 -5 160 3 3 1368 292 300 33 26 chr13 102757676 102757833 -17526479 + L1M5 LINE L1 5584 5746 -378 3 1369 717 245 62 7 chr13 102760735 102760879 -17523433 - RSINE1 SINE B4 -10 155 4 3 1369 471 78 0 0 chr13 102760895 102760959 -17523353 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 3 1369 724 180 86 0 chr13 102760977 102761105 -17523207 - B1_Mur2 SINE Alu -6 143 5 3 1369 195 375 35 26 chr13 102762250 102762365 -17521947 - MIR3 SINE MIR -3 205 90 3 1369 354 233 0 0 chr13 102762400 102762486 -17521826 + (CATATA)n Simple_repeat Simple_repeat 2 87 0 3 1369 1700 182 94 31 chr13 102762946 102763298 -17521014 - ORR1D1 LTR MaLR 0 374 1 3 1369 626 143 8 0 chr13 102763904 102764023 -17520289 + (CA)n Simple_repeat Simple_repeat 2 121 0 3 1369 187 321 59 79 chr13 102764178 102764330 -17519982 + MIR3 SINE MIR 4 152 -56 3 1369 1838 252 129 32 chr13 102766949 102767677 -17516635 + L1MC LINE L1 4146 4944 -1202 3 1369 577 261 55 50 chr13 102767699 102768014 -17516298 + ORR1E LTR MaLR 3 377 -2 3 1369 3527 295 93 27 chr13 102768051 102769307 -17515005 + MTE-int LTR MaLR 45 1383 -197 3 1369 22 35 0 0 chr13 102769309 102769338 -17514974 + AT_rich Low_complexity Low_complexity 1 29 0 3 1369 24 0 0 0 chr13 102770442 102770466 -17513846 + AT_rich Low_complexity Low_complexity 1 24 0 3 1369 995 156 139 0 chr13 102770950 102771130 -17513182 - URR1B DNA MER1_type -20 205 1 3 1369 250 272 86 0 chr13 102771375 102771456 -17512856 - L1MC5 LINE L1 -584 7377 7290 3 1369 1191 199 48 5 chr13 102771858 102772065 -17512247 - B3 SINE B2 0 216 1 3 1369 322 284 146 19 chr13 102772916 102773074 -17511238 - MLT1C LTR MaLR -284 183 6 4 1369 450 0 0 0 chr13 102774001 102774051 -17510261 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1369 1019 239 45 148 chr13 102774774 102775142 -17509170 + MTE2a LTR MaLR 5 335 -44 4 1369 2836 28 31 0 chr13 102775142 102775459 -17508853 + IAPLTR2b LTR ERVK 1 327 0 4 1369 1019 239 45 148 chr13 102775459 102775508 -17508804 + MTE2a LTR MaLR 336 379 0 4 1369 540 0 0 0 chr13 102777554 102777614 -17506698 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 4 1369 210 71 0 0 chr13 102777638 102777666 -17506646 + (CCCA)n Simple_repeat Simple_repeat 2 29 0 4 1369 681 243 17 39 chr13 102778302 102778482 -17505830 - B4A SINE B4 -12 280 105 4 1369 279 248 0 37 chr13 102779970 102779993 -17504319 + ORR1B1-int LTR MaLR 629 647 -862 4 1369 692 158 0 34 chr13 102779993 102780111 -17504201 + B1_Mus2 SINE Alu 1 114 -33 4 1369 324 94 0 0 chr13 102780123 102780176 -17504136 + (A)n Simple_repeat Simple_repeat 1 53 0 4 1369 189 113 0 86 chr13 102780198 102780256 -17504056 + G-rich Low_complexity Low_complexity 5 57 0 4 1369 382 306 102 50 chr13 102780479 102780782 -17503530 + L1MC5 LINE L1 7610 7928 -33 4 1369 303 191 0 0 chr13 102780889 102780952 -17503360 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 4 1369 622 297 15 19 chr13 102781623 102781829 -17502483 - Lx8 LINE L1 -297 7176 6972 4 1369 357 279 21 31 chr13 102783572 102783668 -17500644 + B3 SINE B2 120 214 -2 4 1369 68 79 0 0 chr13 102783791 102783943 -17500369 + AT_rich Low_complexity Low_complexity 1 152 0 4 1369 287 281 164 0 chr13 102783943 102784114 -17500198 + L1M3 LINE L1 5655 5853 -327 4 1369 661 272 68 50 chr13 102784126 102784433 -17499879 - MLT1A0 LTR MaLR -35 373 19 4 1369 342 0 0 0 chr13 102785397 102785435 -17498877 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1369 1163 319 93 4 chr13 102786451 102786999 -17497313 + Lx8 LINE L1 6843 7439 -34 4 1369 21 0 0 0 chr13 102787017 102787038 -17497274 + AT_rich Low_complexity Low_complexity 1 21 0 4 1369 306 343 83 49 chr13 102787064 102787088 -17497224 - B1F SINE Alu 0 149 132 4 1369 1211 233 93 28 chr13 102787088 102787442 -17496870 - MTE2a LTR MaLR -2 377 1 4 1369 306 343 83 49 chr13 102787442 102787561 -17496751 - B1F SINE Alu -18 131 1 4 1369 232 279 56 32 chr13 102787580 102787706 -17496606 + L1ME1 LINE L1 4098 4226 -1920 4 1369 288 0 0 0 chr13 102787728 102787760 -17496552 + (CA)n Simple_repeat Simple_repeat 2 33 0 4 1369 330 301 88 50 chr13 102788048 102788345 -17495967 + L1ME1 LINE L1 4623 4930 -1216 4 1369 779 314 73 9 chr13 102788379 102788938 -17495374 + L1ME1 LINE L1 5263 5857 -322 4 1369 28 29 0 0 chr13 102789485 102789520 -17494792 + AT_rich Low_complexity Low_complexity 1 35 0 4 1369 1105 210 64 36 chr13 102789619 102789980 -17494332 - Lx7 LINE L1 0 7696 7326 4 1369 551 301 72 47 chr13 102790115 102790169 -17494143 - Lx8 LINE L1 -75 7398 7333 4 1369 1067 134 6 0 chr13 102790169 102790348 -17493964 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 1369 651 26 0 0 chr13 102790348 102790425 -17493887 + (TTTC)n Simple_repeat Simple_repeat 1 77 0 4 1369 551 301 72 47 chr13 102790425 102790648 -17493664 - Lx8 LINE L1 -141 7332 7114 4 1369 297 0 0 0 chr13 102790770 102790803 -17493509 + (TA)n Simple_repeat Simple_repeat 2 34 0 4 1369 351 0 0 0 chr13 102790803 102790841 -17493471 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1369 247 294 58 16 chr13 102791758 102791879 -17492433 + L1M5 LINE L1 4690 4815 -1331 4 1369 3093 175 104 23 chr13 102792013 102792113 -17492199 - RMER1A Other Other -14 1016 915 4 1369 324 0 0 0 chr13 102792113 102792149 -17492163 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1369 3093 187 92 20 chr13 102792149 102792819 -17491493 - RMER1A Other Other -116 914 274 4 1369 250 372 11 11 chr13 102792869 102792964 -17491348 + MLT1A1 LTR MaLR 50 144 -264 4 1369 628 25 0 0 chr13 102793145 102793226 -17491086 + L1Md_T LINE L1 6499 6579 -3 4 1369 317 333 24 16 chr13 102793654 102793779 -17490533 + MIRb SINE MIR 3 128 -140 4 1369 465 304 103 7 chr13 102793786 102793932 -17490380 + RSINE1 SINE B4 4 163 -2 4 1369 259 321 123 7 chr13 102795141 102795279 -17489033 - MIRb SINE MIR -42 226 73 4 1369 903 98 0 0 chr13 102795551 102795683 -17488629 + (GA)n Simple_repeat Simple_repeat 1 132 0 4 1369 263 312 16 146 chr13 102796608 102796813 -17487499 + L2b LINE L2 2989 3161 -214 4 1369 697 294 91 30 chr13 102796956 102797254 -17487058 - MLT1A0 LTR MaLR -9 356 41 4 1369 1038 318 47 28 chr13 102797571 102798205 -17486107 - L1MB4 LINE L1 0 6180 5535 4 1369 181 265 0 39 chr13 102798242 102798293 -17486019 + L3 LINE CR1 895 943 -3546 4 1369 825 309 136 14 chr13 102799151 102799519 -17484793 - RCHARR1 DNA MER1_type -558 416 4 4 1369 219 311 156 22 chr13 102799530 102799665 -17484647 + MIRb SINE MIR 35 187 -81 4 1369 311 60 20 0 chr13 102799846 102799896 -17484416 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 4 1369 1140 51 0 0 chr13 102799896 102800034 -17484278 - B1_Mus1 SINE Alu -9 139 2 4 1369 417 300 30 25 chr13 102801744 102801899 -17482413 + MIRb SINE MIR 8 161 -115 4 1369 220 351 39 6 chr13 102802445 102802575 -17481737 + MIR SINE MIR 95 232 -36 4 1369 429 321 135 88 chr13 102803069 102803602 -17480710 + MER74B LTR ERVL 56 613 -9 4 1369 249 302 72 24 chr13 102804145 102804311 -17480001 - L1MA4 LINE L1 -126 6174 6001 4 1369 372 319 97 5 chr13 102805070 102805265 -17479047 + MER99 DNA hAT? 33 245 -586 4 1369 581 316 56 17 chr13 102805393 102805573 -17478739 - B3 SINE B2 -28 188 2 4 1369 320 355 139 5 chr13 102806640 102806855 -17477457 + MIR SINE MIR 17 260 -2 4 1369 437 200 72 21 chr13 102807593 102807690 -17476622 - PB1D9 SINE Alu -7 113 12 4 1369 282 224 279 36 chr13 102807690 102807704 -17476608 - ID_B1 SINE B4 -7 217 80 4 1369 290 284 9 29 chr13 102807730 102807835 -17476477 + CT-rich Low_complexity Low_complexity 4 106 0 4 1369 24 53 0 0 chr13 102808386 102808424 -17475888 + AT_rich Low_complexity Low_complexity 1 38 0 4 1369 4917 204 53 42 chr13 102808643 102808997 -17475315 - Lx9 LINE L1 0 7644 7321 4 1369 483 18 0 0 chr13 102808997 102809053 -17475259 + (TG)n Simple_repeat Simple_repeat 2 57 0 4 1369 4917 204 53 42 chr13 102809053 102809779 -17474533 - Lx9 LINE L1 -324 7320 6552 4 1369 1474 153 180 25 chr13 102809779 102810095 -17474217 + ORR1B2 LTR MaLR 3 367 0 4 1369 4917 204 53 42 chr13 102810095 102810259 -17474053 - Lx9 LINE L1 -1093 6551 6385 4 1369 5805 87 19 14 chr13 102810273 102811104 -17473208 - L1_Mus4 LINE L1 -14 6622 5788 4 1369 360 0 0 0 chr13 102811212 102811252 -17473060 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1369 251 112 55 22 chr13 102811252 102811343 -17472969 + (TA)n Simple_repeat Simple_repeat 1 94 0 4 1369 230 209 37 37 chr13 102811345 102811454 -17472858 + (TATAA)n Simple_repeat Simple_repeat 3 111 0 4 1369 226 79 79 0 chr13 102811589 102811652 -17472660 + T-rich Low_complexity Low_complexity 5 72 0 4 1369 752 239 73 11 chr13 102812181 102812383 -17471929 + B3 SINE B2 2 193 -2 4 1369 5448 73 9 69 chr13 102812714 102813525 -17470787 - L1_Mus3 LINE L1 -6 6632 5871 4 1369 227 302 54 45 chr13 102813525 102813636 -17470676 - PB1D10 SINE Alu -3 114 3 4 1369 51 42 0 0 chr13 102813795 102813867 -17470445 + AT_rich Low_complexity Low_complexity 1 72 0 4 1369 429 266 39 46 chr13 102813964 102814244 -17470068 - L1MA9 LINE L1 -187 6125 5848 4 1369 593 277 15 44 chr13 102814346 102814585 -17469727 + MTE2a LTR MaLR 1 225 -194 4 1369 529 289 80 20 chr13 102814590 102815164 -17469148 - L1MA9 LINE L1 -538 5753 5139 4 1369 394 286 19 114 chr13 102815255 102815413 -17468899 - MLT1D LTR MaLR -358 147 5 4 1369 427 293 107 25 chr13 102815712 102815908 -17468404 - Tigger6b DNA MER2_type -2 1595 1384 4 1369 1838 39 0 21 chr13 102816074 102816307 -17468005 + L1Md_F2 LINE L1 6343 6570 -12 4 1369 4688 164 61 35 chr13 102816565 102817432 -17466880 - RMER19B LTR ERVK -12 890 1 4 1369 593 61 12 0 chr13 102817829 102817911 -17466401 + (TCTA)n Simple_repeat Simple_repeat 1 83 0 4 1369 543 31 0 0 chr13 102817933 102817998 -17466314 + (GA)n Simple_repeat Simple_repeat 2 66 0 4 1369 335 236 191 0 chr13 102817999 102818088 -17466224 - ID_B1 SINE B4 -17 207 102 4 1369 8477 17 13 0 chr13 102818114 102819139 -17465173 - L1Md_T LINE L1 -53 5830 4793 4 1369 6342 39 0 0 chr13 102819142 102819896 -17464416 + L1Md_T LINE L1 5827 6580 -2 4 1369 240 296 91 18 chr13 102820835 102820945 -17463367 - L2a LINE L2 -4 3422 3305 4 1369 1087 63 0 27 chr13 102820964 102821111 -17463201 + B1_Mus1 SINE Alu 1 143 -5 4 1369 270 0 0 0 chr13 102821112 102821142 -17463170 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 4 1369 967 300 59 24 chr13 102821407 102821748 -17462564 + MLT1A0 LTR MaLR 1 353 -12 4 1369 979 136 0 13 chr13 102821889 102822038 -17462274 - B1_Mus1 SINE Alu 0 148 2 4 1369 187 286 0 67 chr13 102822374 102822434 -17461878 + L2c LINE L2 3274 3350 -76 4 1369 354 45 0 0 chr13 102822562 102822606 -17461706 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1369 1506 61 0 0 chr13 102822656 102823552 -17460760 + (TG)n Simple_repeat Simple_repeat 1 896 0 4 1369 370 312 31 12 chr13 102823639 102823801 -17460511 - Lx9 LINE L1 -317 7327 7163 4 1369 320 216 67 11 chr13 102823962 102824051 -17460261 + LTR37A LTR ERV1 307 400 -26 4 1369 410 329 19 70 chr13 102824068 102824225 -17460087 - B1F1 SINE Alu 0 149 1 4 1369 194 223 17 43 chr13 102825011 102825128 -17459184 + GA-rich Low_complexity Low_complexity 1 114 0 4 1369 1261 62 6 11 chr13 102825130 102825311 -17459001 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 4 1369 878 246 69 72 chr13 102825996 102826316 -17457996 + ORR1E LTR MaLR 1 319 -40 4 1369 387 98 0 0 chr13 102826316 102826377 -17457935 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1369 620 332 28 68 chr13 102826396 102826645 -17457667 - B4A SINE B4 0 292 54 4 1369 182 300 50 0 chr13 102827627 102827687 -17456625 + L2b LINE L2 3098 3160 -215 4 1369 436 321 20 64 chr13 102830380 102830723 -17453589 - L1MC LINE L1 -2059 5823 5496 4 1369 1011 174 94 5 chr13 102831019 102831221 -17453091 + URR1A DNA MER1_type 7 226 0 5 1369 1130 248 93 23 chr13 102831222 102831532 -17452780 + MTEa LTR MaLR 36 367 -12 5 1369 3416 25 2 0 chr13 102831625 102832024 -17452288 - L1Md_F2 LINE L1 0 6582 6183 5 1369 189 74 0 0 chr13 102833562 102833589 -17450723 + (TC)n Simple_repeat Simple_repeat 1 27 0 5 1369 521 76 42 17 chr13 102833589 102833709 -17450603 + (TCTA)n Simple_repeat Simple_repeat 2 124 0 5 1369 378 0 0 0 chr13 102833766 102833808 -17450504 + (TATG)n Simple_repeat Simple_repeat 2 43 0 5 1369 417 229 81 18 chr13 102834031 102834142 -17450170 + RMER30 DNA MER1_type 84 201 -1 5 1369 189 0 0 0 chr13 102834463 102834484 -17449828 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 5 1369 190 303 55 22 chr13 102834561 102834652 -17449660 - MIR SINE MIR -60 148 55 5 1369 369 0 0 0 chr13 102836312 102836353 -17447959 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1369 327 326 0 30 chr13 102836845 102836978 -17447334 + CT-rich Low_complexity Low_complexity 5 133 0 5 1369 268 228 0 32 chr13 102837057 102837152 -17447160 + CT-rich Low_complexity Low_complexity 5 96 0 5 1369 2491 163 39 12 chr13 102838079 102838489 -17445823 + MTC LTR MaLR 1 421 0 5 1369 246 128 0 0 chr13 102838671 102838710 -17445602 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1369 537 303 62 9 chr13 102839225 102839435 -17444877 - MER47B DNA MER2_type -161 257 37 5 1369 417 270 0 0 chr13 102839491 102839580 -17444732 - MLT2B4 LTR ERVL -68 499 411 5 1369 521 225 87 47 chr13 102839581 102839730 -17444582 - MLT2B4 LTR ERVL -401 155 1 5 1369 612 286 54 21 chr13 102839988 102840174 -17444138 - ID_B1 SINE B4 -31 193 2 5 1369 1180 84 0 0 chr13 102840294 102840436 -17443876 - B1_Mus2 SINE Alu -4 143 2 5 1369 682 338 66 23 chr13 102841086 102841434 -17442878 + MER121 Unknown Unknown 48 410 -2 5 1369 907 300 68 5 chr13 102842407 102842802 -17441510 + MER90 LTR ERV1 83 502 -73 5 1369 441 0 0 0 chr13 102842880 102842929 -17441383 + (TG)n Simple_repeat Simple_repeat 1 49 0 5 1369 387 0 0 0 chr13 102842929 102842971 -17441341 + (GA)n Simple_repeat Simple_repeat 1 43 0 5 1369 525 265 0 0 chr13 102842974 102843072 -17441240 - RSINE1 SINE B4 -63 102 5 5 1369 472 222 115 74 chr13 102843221 102843464 -17440848 - L1M4 LINE L1 -847 5299 5047 5 1369 1545 225 50 61 chr13 102843720 102844098 -17440214 + MTE2b LTR MaLR 6 379 0 5 1369 1747 226 92 35 chr13 102844474 102844896 -17439416 - RLTR41 LTR ERV1 0 446 1 5 1369 218 56 0 27 chr13 102845077 102845114 -17439198 + (CAAAAA)n Simple_repeat Simple_repeat 4 39 0 5 1369 725 231 0 53 chr13 102845128 102845279 -17439033 + RSINE1 SINE B4 4 146 -19 5 1369 424 266 77 31 chr13 102847945 102848139 -17436173 + L1MC3 LINE L1 6792 6994 -791 5 1369 890 330 133 24 chr13 102848206 102848598 -17435714 + L1MC3 LINE L1 7133 7562 -223 5 1369 195 69 0 0 chr13 102848598 102848627 -17435685 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 5 1369 890 330 133 24 chr13 102848627 102848821 -17435491 + L1MC3 LINE L1 7563 7782 -3 5 1369 249 164 53 27 chr13 102848818 102848893 -17435419 + L1M4 LINE L1 1309 1385 -5157 5 1369 277 258 173 0 chr13 102848903 102849011 -17435301 + L1ME1 LINE L1 4711 4829 -1311 5 1369 1277 78 0 6 chr13 102849031 102849211 -17435101 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 5 1369 4911 72 7 0 chr13 102849242 102849857 -17434455 - L1_Mus3 LINE L1 -5 6633 6015 5 1369 408 292 9 19 chr13 102849962 102850070 -17434242 + B1_Mur2 SINE Alu 6 112 -37 5 1369 230 0 33 0 chr13 102850092 102850122 -17434190 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1369 1223 51 0 0 chr13 102850122 102850260 -17434052 - B1_Mus1 SINE Alu -9 139 2 5 1369 682 132 41 73 chr13 102850501 102850624 -17433688 + PB1D9 SINE Alu 1 119 -1 5 1369 797 184 0 6 chr13 102850655 102850819 -17433493 + (CA)n Simple_repeat Simple_repeat 2 164 0 5 1369 490 287 87 9 chr13 102850982 102851274 -17433038 + L1ME1 LINE L1 5844 6159 -20 5 1369 1193 55 14 14 chr13 102851633 102851781 -17432531 - B1_Mur4 SINE Alu -2 148 1 5 1369 188 288 39 52 chr13 102852506 102852583 -17431729 + MIR SINE MIR 171 246 -16 5 1369 603 233 9 0 chr13 102852973 102853089 -17431223 - ID_B1 SINE B4 -20 204 88 5 1369 1143 54 0 0 chr13 102853883 102854030 -17430282 + (TCTCCC)n Simple_repeat Simple_repeat 4 150 0 5 1369 243 88 0 0 chr13 102854374 102854408 -17429904 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1369 414 0 0 0 chr13 102855590 102855636 -17428676 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1369 459 0 0 0 chr13 102855636 102855686 -17428626 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1369 432 0 0 0 chr13 102856167 102856215 -17428097 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1369 1085 54 0 13 chr13 102856737 102856887 -17427425 + (GGAGAA)n Simple_repeat Simple_repeat 2 149 0 5 1369 252 0 0 0 chr13 102857026 102857054 -17427258 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 5 1369 274 361 33 0 chr13 102858480 102858602 -17425710 - MIRb SINE MIR -28 240 115 5 1369 351 0 0 0 chr13 102858861 102858900 -17425412 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1369 675 305 34 49 chr13 102859247 102859509 -17424803 + MIRb SINE MIR 3 256 -12 5 1369 2149 128 108 0 chr13 102860059 102860448 -17423864 - BGLII_B LTR ERVK 0 441 11 5 1369 468 0 0 0 chr13 102861350 102861402 -17422910 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1369 235 376 70 43 chr13 102862136 102862436 -17421876 + L2 LINE L2 1850 2157 -1262 5 1369 475 333 69 69 chr13 102864207 102864526 -17419786 + MTEa LTR MaLR 38 356 -23 5 1369 725 269 28 22 chr13 102864668 102864847 -17419465 - B3A SINE B2 -16 182 3 5 1369 558 67 0 0 chr13 102864847 102864922 -17419390 + (TA)n Simple_repeat Simple_repeat 2 76 0 5 1369 2598 204 65 37 chr13 102865296 102865439 -17418873 - Lx9 LINE L1 -7 7637 7478 5 1369 473 0 18 0 chr13 102865439 102865496 -17418816 + (CA)n Simple_repeat Simple_repeat 2 59 0 5 1369 2598 204 65 37 chr13 102865496 102865979 -17418333 - Lx9 LINE L1 -167 7477 6994 5 1369 366 323 123 17 chr13 102866040 102866432 -17417880 + MLT1J2 LTR MaLR 1 444 -4 5 1369 441 0 0 0 chr13 102866446 102866495 -17417817 + (TC)n Simple_repeat Simple_repeat 2 50 0 5 1369 339 25 0 0 chr13 102866495 102866534 -17417778 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1369 200 333 27 89 chr13 102866689 102866801 -17417511 - L2c LINE L2 -3 3384 3280 5 1369 191 306 65 0 chr13 102866788 102866850 -17417462 + L2b LINE L2 3310 3375 0 5 1369 280 60 39 20 chr13 102867181 102867232 -17417080 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 5 1369 22 0 0 0 chr13 102867691 102867713 -17416599 + AT_rich Low_complexity Low_complexity 1 22 0 5 1369 1224 55 7 0 chr13 102867724 102867870 -17416442 - B1_Mm SINE Alu 0 147 1 5 1369 477 34 0 0 chr13 102868216 102868275 -17416037 + (TG)n Simple_repeat Simple_repeat 2 60 0 5 1369 761 320 43 5 chr13 102868295 102868505 -17415807 - B4 SINE B4 -18 274 57 5 1369 1419 248 96 33 chr13 102868505 102868988 -17415324 - RLTR20C LTR ERVK 0 534 1 5 1369 281 260 0 0 chr13 102868990 102869063 -17415249 - MYSERV16_I-int LTR ERVK -2 2840 2768 5 1369 5041 127 36 5 chr13 102869069 102869910 -17414402 - MYSERV16_I-int LTR ERVK -393 1933 1067 5 1369 4253 200 42 40 chr13 102869916 102870987 -17413325 - MYSERV16_I-int LTR ERVK -1449 1393 2 5 1369 260 299 30 65 chr13 102871550 102871718 -17412594 - MYSERV16_I-int LTR ERVK -2545 297 136 5 1369 1148 250 33 16 chr13 102871913 102872218 -17412094 - RLTR20C LTR ERVK -173 361 52 5 1369 341 337 23 0 chr13 102872310 102872396 -17411916 - PB1D10 SINE Alu -28 89 2 5 1369 336 360 86 0 chr13 102873113 102873299 -17411013 + L1MEd LINE L1 466 667 -5452 5 1369 279 79 0 0 chr13 102873583 102873621 -17410691 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1369 6512 6 0 0 chr13 102873624 102874301 -17410011 - L1Md_T LINE L1 0 6582 5906 5 1369 593 239 28 0 chr13 102874656 102874765 -17409547 + RSINE1 SINE B4 30 141 -24 5 1369 306 0 0 0 chr13 102874768 102874802 -17409510 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1369 301 244 0 118 chr13 102875213 102875315 -17408997 + MER5A DNA MER1_type 68 157 -32 5 1369 234 0 0 0 chr13 102875451 102875477 -17408835 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 1369 369 289 60 17 chr13 102875477 102875584 -17408728 - RSINE1 SINE B4 -7 158 45 5 1369 246 192 0 0 chr13 102875652 102875704 -17408608 + CT-rich Low_complexity Low_complexity 3 54 0 5 1369 256 210 16 0 chr13 102875705 102875767 -17408545 + (CA)n Simple_repeat Simple_repeat 1 63 0 5 1369 314 314 19 19 chr13 102875901 102876008 -17408304 - PB1D7 SINE Alu -5 115 9 5 1369 1493 229 30 82 chr13 102876170 102876570 -17407742 + MTEa LTR MaLR 1 379 0 5 1369 413 76 15 0 chr13 102876921 102876987 -17407325 + (TG)n Simple_repeat Simple_repeat 1 67 0 5 1369 627 14 0 0 chr13 102876987 102877058 -17407254 + (GA)n Simple_repeat Simple_repeat 1 72 0 5 1369 211 206 203 16 chr13 102877824 102877888 -17406424 - PB1D9 SINE Alu -5 115 40 5 1369 351 0 0 0 chr13 102877913 102877952 -17406360 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1369 332 318 43 82 chr13 102879433 102879666 -17404646 - MLT2B2 LTR ERVL -289 226 3 5 1369 906 208 137 36 chr13 102879669 102879918 -17404394 + B4A SINE B4 3 276 -16 5 1369 335 311 75 26 chr13 102880372 102880600 -17403712 - MIR SINE MIR -19 243 5 5 1369 250 309 73 21 chr13 102881905 102882001 -17402311 + MIR SINE MIR 23 123 -139 5 1369 2628 269 74 48 chr13 102882655 102883171 -17401141 + Lx8 LINE L1 6221 6759 -714 5 1369 396 0 0 0 chr13 102883171 102883215 -17401097 + (TTA)n Simple_repeat Simple_repeat 2 45 0 5 1369 2628 269 74 48 chr13 102883215 102883579 -17400733 + Lx8 LINE L1 6760 7123 -350 5 1369 250 200 0 30 chr13 102883635 102883702 -17400610 + Lx8 LINE L1 7409 7473 0 5 1369 266 307 13 0 chr13 102884895 102884970 -17399342 - ID4 SINE ID -4 79 4 5 1369 207 88 0 0 chr13 102886044 102886078 -17398234 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1369 371 73 18 0 chr13 102886266 102886321 -17397991 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1369 1290 34 0 7 chr13 102886872 102887019 -17397293 + B1_Mus2 SINE Alu 1 146 -1 5 1369 418 292 100 21 chr13 102887167 102887307 -17397005 - RSINE1 SINE B4 -12 153 3 5 1369 309 253 147 45 chr13 102890021 102890178 -17394134 + Ricksha_c DNA MuDR 589 761 -1287 6 1369 447 244 44 19 chr13 102890286 102890445 -17393867 + ORSL DNA Tip100 1 163 -112 6 1369 674 270 70 5 chr13 102890464 102890650 -17393662 - B3 SINE B2 -5 211 14 6 1369 243 330 75 0 chr13 102890662 102890768 -17393544 + ORSL DNA Tip100 158 271 -4 6 1369 252 253 65 26 chr13 102891379 102891456 -17392856 + MLT1C LTR MaLR 50 129 -338 6 1370 361 328 16 8 chr13 102891551 102891677 -17392635 + MLT1C LTR MaLR 256 382 -85 6 1370 1925 221 41 10 chr13 102891686 102892080 -17392232 - MTD LTR MaLR -13 406 1 6 1370 290 269 75 0 chr13 102892080 102892167 -17392145 + MLT1C LTR MaLR 371 464 -3 6 1370 189 107 0 0 chr13 102893131 102893159 -17391153 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 6 1370 763 75 0 9 chr13 102893346 102893454 -17390858 - B1_Mus2 SINE Alu 0 147 41 6 1370 286 173 90 39 chr13 102893389 102893467 -17390845 - RLTR25B LTR ERVK -519 509 428 6 1370 21 82 0 0 chr13 102893689 102893738 -17390574 + AT_rich Low_complexity Low_complexity 1 49 0 6 1370 987 221 26 0 chr13 102893747 102893978 -17390334 + Lx7 LINE L1 6848 7084 -612 6 1370 2725 135 83 4 chr13 102894433 102894893 -17389419 + Lx3C LINE L1 6474 6969 -7 6 1370 3589 214 60 9 chr13 102894981 102895880 -17388432 + Lx9 LINE L1 6692 7636 -8 6 1370 1191 41 0 0 chr13 102896345 102896491 -17387821 + L1Md_F2 LINE L1 5441 5586 -297 6 1370 7873 52 9 6 chr13 102896491 102897484 -17386828 + L1Md_F2 LINE L1 5587 6582 0 6 1370 1202 296 56 8 chr13 102898109 102898464 -17385848 - MTEa LTR MaLR -1 378 7 6 1370 423 0 0 0 chr13 102898946 102898993 -17385319 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1370 1286 143 9 27 chr13 102899237 102899459 -17384853 - URR1B DNA MER1_type -6 219 2 6 1370 398 329 145 65 chr13 102899605 102899930 -17384382 + MLT1G1 LTR MaLR 1 351 -228 6 1370 1900 210 47 18 chr13 102902563 102903071 -17381241 + Lx9 LINE L1 6956 7478 -166 6 1370 538 14 28 0 chr13 102903071 102903142 -17381170 + (CA)n Simple_repeat Simple_repeat 2 74 0 6 1370 586 152 8 0 chr13 102903143 102903268 -17381044 + Lx9 LINE L1 7519 7644 0 6 1370 265 296 42 19 chr13 102904018 102904183 -17380129 - MIR3 SINE MIR -21 187 20 6 1370 1765 191 116 50 chr13 102905059 102905440 -17378872 - MTD LTR MaLR -8 411 6 6 1370 483 18 0 0 chr13 102905440 102905496 -17378816 + (CA)n Simple_repeat Simple_repeat 2 57 0 6 1370 454 86 0 24 chr13 102906471 102906554 -17377758 + (TC)n Simple_repeat Simple_repeat 2 82 0 6 1370 243 306 148 45 chr13 102907090 102907401 -17376911 + Charlie5 DNA MER1_type 2270 2612 -12 6 1370 1135 215 40 100 chr13 102907402 102907851 -17376461 - Lx9 LINE L1 -44 7600 7179 6 1370 1097 209 58 64 chr13 102907854 102908166 -17376146 + Lx9 LINE L1 6849 7158 -486 6 1370 1110 117 75 15 chr13 102908200 102908399 -17375913 - ORR1A3 LTR MaLR 0 326 116 6 1370 991 113 32 92 chr13 102908464 102908649 -17375663 - ORR1A2 LTR MaLR -153 174 1 6 1370 468 227 21 0 chr13 102908734 102908831 -17375481 - PB1D7 SINE Alu 0 120 22 6 1370 1239 298 58 12 chr13 102909195 102909817 -17374495 - L1MA7 LINE L1 -438 5853 5198 6 1370 2500 154 29 17 chr13 102909891 102910307 -17374005 - MTC LTR MaLR 0 421 1 6 1370 285 340 43 0 chr13 102911087 102911181 -17373131 - PB1D10 SINE Alu -8 109 12 6 1370 233 53 53 0 chr13 102913410 102913448 -17370864 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 6 1370 888 228 41 0 chr13 102913479 102913676 -17370636 + B3 SINE B2 5 209 -7 6 1370 844 295 73 40 chr13 102915089 102915361 -17368951 + B4A SINE B4 12 292 0 6 1370 231 125 100 0 chr13 102915845 102915885 -17368427 + MTE2a LTR MaLR 278 321 -58 6 1370 401 305 76 40 chr13 102916142 102916340 -17367972 - MER63A DNA AcHobo -5 205 1 6 1370 861 319 69 33 chr13 102916884 102917159 -17367153 - B4A SINE B4 -6 286 2 6 1370 2367 190 42 68 chr13 102917384 102917960 -17366352 + RLTR31_Mm LTR ERVK 1 561 0 6 1370 325 211 50 43 chr13 102918481 102918620 -17365692 - L1MCa LINE L1 -5123 1385 1246 6 1370 1284 89 0 0 chr13 102918643 102918823 -17365489 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 6 1370 471 167 0 0 chr13 102918823 102918913 -17365399 + CT-rich Low_complexity Low_complexity 1 90 0 6 1370 559 276 102 30 chr13 102918913 102919015 -17365297 - L1MCa LINE L1 -5228 1280 1176 6 1370 261 0 0 0 chr13 102919015 102919044 -17365268 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 6 1370 559 276 102 30 chr13 102919044 102919314 -17364998 - L1MCa LINE L1 -5333 1175 882 6 1370 371 274 26 26 chr13 102919401 102919517 -17364795 - PB1D10 SINE Alu -1 116 1 6 1370 36 23 0 0 chr13 102919573 102919616 -17364696 + AT_rich Low_complexity Low_complexity 1 43 0 6 1370 22 0 0 0 chr13 102919781 102919803 -17364509 + AT_rich Low_complexity Low_complexity 1 22 0 6 1370 414 85 0 0 chr13 102920460 102920519 -17363793 + (TATG)n Simple_repeat Simple_repeat 4 62 0 6 1370 297 173 0 0 chr13 102920665 102920717 -17363595 + URR1B DNA MER1_type 173 224 -1 6 1370 511 181 17 0 chr13 102920841 102920957 -17363355 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 6 1370 31 26 0 0 chr13 102921764 102921802 -17362510 + AT_rich Low_complexity Low_complexity 1 38 0 6 1370 727 272 103 16 chr13 102921972 102922464 -17361848 - L1MB2 LINE L1 0 6183 5634 6 1370 387 60 0 0 chr13 102922711 102922761 -17361551 + (ATTG)n Simple_repeat Simple_repeat 1 50 0 6 1370 414 0 0 0 chr13 102923392 102923438 -17360874 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1370 579 137 0 0 chr13 102923439 102923563 -17360749 + (GA)n Simple_repeat Simple_repeat 1 124 0 6 1370 233 241 37 0 chr13 102924807 102924820 -17359492 + MER3 DNA MER1_type 35 49 -160 6 1370 283 289 41 10 chr13 102924820 102924918 -17359394 - MER3 DNA MER1_type -1 208 108 6 1370 685 291 146 25 chr13 102925061 102925336 -17358976 + MLT1A0 LTR MaLR 36 343 -22 6 1370 209 128 231 0 chr13 102925493 102925532 -17358780 - MER91A DNA Tip100 -25 171 124 6 1370 476 240 52 107 chr13 102925561 102925794 -17358518 + Lx8 LINE L1 7246 7465 -8 6 1370 426 340 50 44 chr13 102925824 102925984 -17358328 + RSINE1 SINE B4 5 165 0 6 1370 8633 2 0 0 chr13 102926032 102927028 -17357284 - L1Md_A LINE L1 0 6582 5587 6 1370 281 333 0 26 chr13 102927068 102927145 -17357167 + RSINE1 SINE B4 91 165 0 6 1370 279 0 0 0 chr13 102927149 102927180 -17357132 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1370 443 309 120 46 chr13 102927936 102928098 -17356214 + L1MEc LINE L1 75 239 -6161 6 1370 3326 40 2 2 chr13 102928098 102928494 -17355818 - MTA_Mm LTR MaLR 0 396 1 6 1370 443 309 120 46 chr13 102928494 102929021 -17355291 + L1MEc LINE L1 240 815 -5585 6 1370 357 24 0 0 chr13 102929231 102929273 -17355039 + (TG)n Simple_repeat Simple_repeat 2 43 0 6 1370 275 279 12 12 chr13 102929273 102929440 -17354872 + GA-rich Low_complexity Low_complexity 2 168 0 6 1370 12424 124 14 14 chr13 102929485 102932529 -17351783 + L1_Mus4 LINE L1 3610 6636 0 6 1370 664 136 0 16 chr13 102933128 102933255 -17351057 + GA-rich Low_complexity Low_complexity 1 125 0 6 1370 609 129 0 0 chr13 102933324 102933440 -17350872 + (TC)n Simple_repeat Simple_repeat 1 116 0 6 1370 184 434 9 0 chr13 102935511 102935617 -17348695 + MER5A DNA MER1_type 58 164 -25 6 1370 851 179 0 0 chr13 102935668 102935802 -17348510 - B1_Mus2 SINE Alu -6 141 8 6 1370 386 255 53 0 chr13 102935901 102935995 -17348317 + MTEb LTR MaLR 7 105 -254 6 1370 538 314 9 12 chr13 102936022 102936220 -17348092 + MTEb LTR MaLR 172 379 0 6 1370 317 250 23 0 chr13 102936322 102936410 -17347902 - L1MA5A LINE L1 -397 5900 5811 6 1370 314 205 35 26 chr13 102936424 102936539 -17347773 + (TA)n Simple_repeat Simple_repeat 2 117 0 6 1370 879 281 20 28 chr13 102936543 102936939 -17347373 - L1MA5A LINE L1 -507 5793 5401 6 1370 198 71 0 0 chr13 102937143 102937171 -17347141 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6 1370 181 410 52 15 chr13 102937200 102937336 -17346976 - L4 LINE RTE -425 1604 1464 6 1370 428 123 14 0 chr13 102938042 102938115 -17346197 + (GGA)n Simple_repeat Simple_repeat 1 74 0 6 1370 513 88 0 0 chr13 102938101 102938181 -17346131 + (GA)n Simple_repeat Simple_repeat 1 80 0 6 1370 855 245 14 24 chr13 102939283 102939496 -17344816 + B3 SINE B2 2 212 -4 6 1370 473 344 151 8 chr13 102940685 102941049 -17343263 - L2 LINE L2 -359 3060 2645 6 1370 203 340 93 31 chr13 102941760 102941921 -17342391 - L2 LINE L2 -1024 2395 2225 6 1370 447 297 365 34 chr13 102943043 102943394 -17340918 + MLT1C LTR MaLR 1 467 0 6 1370 374 134 0 15 chr13 102946157 102946225 -17338087 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 6 1370 269 372 87 32 chr13 102946470 102946814 -17337498 - L2a LINE L2 -26 3400 3038 6 1370 18331 92 18 3 chr13 102947566 102950974 -17333338 + L1Md_F LINE L1 458 3919 -1964 6 1370 4129 81 0 44 chr13 102950969 102951605 -17332707 + L1Md_F LINE L1 4434 5041 -842 6 1370 4969 76 30 3 chr13 102951605 102952276 -17332036 + L1Md_F2 LINE L1 5894 6582 0 6 1370 26 64 0 0 chr13 102952329 102952376 -17331936 + AT_rich Low_complexity Low_complexity 1 47 0 6 1370 310 256 26 0 chr13 102952506 102952584 -17331728 - Lx7 LINE L1 -395 7301 7222 6 1370 464 144 31 10 chr13 102952580 102952678 -17331634 - L1_Rod LINE L1 -1814 4033 3934 6 1370 5940 77 12 7 chr13 102952687 102953589 -17330723 - L1VL4 LINE L1 -1 3558 2652 6 1370 232 167 0 0 chr13 102953658 102953706 -17330606 + T-rich Low_complexity Low_complexity 1 48 0 6 1370 11492 84 12 27 chr13 102954215 102955855 -17328457 - L1VL4 LINE L1 -898 2661 1047 6 1370 1127 76 0 0 chr13 102955855 102956000 -17328312 - B1_Mus2 SINE Alu 0 147 3 6 1370 11492 100 5 7 chr13 102956000 102956836 -17327476 - L1VL4 LINE L1 -2513 1046 210 6 1370 4465 216 67 53 chr13 102956847 102958406 -17325906 - L1_Rod LINE L1 -1922 3925 2345 6 1370 24618 75 3 1 chr13 102958416 102962593 -17321719 - L1Md_F2 LINE L1 -15 6567 2380 6 1370 4189 140 7 19 chr13 102962600 102963771 -17320541 - L1Md_F2 LINE L1 -4300 1583 217 6 1370 2009 189 62 2 chr13 102963776 102964243 -17320069 - L1_Rod LINE L1 -3492 2355 1861 6 1370 758 159 65 0 chr13 102965311 102965449 -17318863 - URR1B DNA MER1_type -1 224 78 6 1370 25777 120 14 3 chr13 102965451 102967988 -17316324 - L1_Mus3 LINE L1 0 6638 4064 6 1370 624 27 0 0 chr13 102967988 102968062 -17316250 + (GA)n Simple_repeat Simple_repeat 2 75 0 6 1370 25777 149 18 29 chr13 102968062 102971804 -17312508 - L1_Mus3 LINE L1 -1820 4063 379 6 1370 485 256 11 0 chr13 102971810 102971900 -17312412 - URR1B DNA MER1_type -133 92 2 6 1370 1820 183 8 41 chr13 102972195 102972582 -17311730 - ORR1C1 LTR MaLR 0 378 5 6 1370 3761 129 29 29 chr13 102974618 102975233 -17309079 - Lx2B LINE L1 -15 6985 6371 6 1370 260 156 0 0 chr13 102975279 102975324 -17308988 + L1VL2 LINE L1 443 487 -5848 6 1370 247 294 53 35 chr13 102975404 102975573 -17308739 + L1VL4 LINE L1 179 350 -5952 6 1370 210 143 52 35 chr13 102975580 102975638 -17308674 + (CCCCAA)n Simple_repeat Simple_repeat 2 60 0 6 1370 246 119 0 0 chr13 102975738 102975780 -17308532 + L1VL2 LINE L1 443 484 -5851 6 1370 3675 104 16 0 chr13 102975781 102976645 -17307667 + L1VL4 LINE L1 586 1465 -2094 7 1370 424 209 0 25 chr13 102978092 102978210 -17306102 + CT-rich Low_complexity Low_complexity 4 118 0 7 1370 4191 141 61 8 chr13 102978256 102978974 -17305338 + RMER6A LTR ERVK 1 756 0 7 1370 293 349 0 44 chr13 102978974 102979064 -17305248 - ID_B1 SINE B4 -52 172 87 7 1370 810 339 47 12 chr13 102979281 102979621 -17304691 + MTE2b LTR MaLR 1 352 -27 7 1370 976 258 52 19 chr13 102980337 102980660 -17303652 + MTD LTR MaLR 6 388 -31 7 1370 234 0 0 0 chr13 102980826 102980852 -17303460 + (CA)n Simple_repeat Simple_repeat 2 27 0 7 1370 281 342 54 9 chr13 102982753 102982865 -17301447 + LTR16A LTR ERVL 214 330 -121 7 1370 2074 162 39 11 chr13 102983377 102983758 -17300554 + ORR1B1 LTR MaLR 1 392 -2 7 1370 1567 179 75 13 chr13 102984837 102985221 -17299091 + Lx9 LINE L1 7236 7643 -1 7 1370 306 73 0 0 chr13 102985252 102985293 -17299019 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1370 351 346 154 0 chr13 102985990 102986198 -17298114 + L1MB8 LINE L1 5377 5616 -568 7 1370 379 227 35 28 chr13 102986403 102986548 -17297764 + L1MB8 LINE L1 5706 5851 -327 7 1370 270 320 99 57 chr13 102987920 102988124 -17296188 - ORR1E LTR MaLR -11 348 127 7 1370 324 0 0 0 chr13 102988124 102988160 -17296152 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1370 270 320 99 57 chr13 102988160 102988217 -17296095 - ORR1E LTR MaLR -233 126 76 7 1370 224 258 17 67 chr13 102988269 102988344 -17295968 - MIRb SINE MIR -159 109 31 7 1370 703 304 39 31 chr13 102989241 102989496 -17294816 - Lx5 LINE L1 0 7050 6794 7 1370 314 243 14 54 chr13 102989701 102989775 -17294537 + MT2A LTR ERVL 50 120 -413 7 1370 1442 228 19 37 chr13 102989716 102990039 -17294273 + MTE2b LTR MaLR 61 377 -2 7 1370 22 0 0 0 chr13 102990095 102990117 -17294195 + AT_rich Low_complexity Low_complexity 1 22 0 7 1370 395 271 7 85 chr13 102990332 102990485 -17293827 + RLTR14 LTR ERV1 1 141 -241 7 1370 475 147 20 0 chr13 102990779 102990881 -17293431 + CT-rich Low_complexity Low_complexity 2 105 0 7 1370 325 295 53 18 chr13 102991171 102991285 -17293027 - L1ME3A LINE L1 -272 5901 5784 7 1370 189 175 0 0 chr13 102991672 102991712 -17292600 + CT-rich Low_complexity Low_complexity 1 40 0 7 1370 5652 173 12 20 chr13 102993017 102994130 -17290182 + Lx5 LINE L1 5533 6643 -407 7 1370 13674 28 0 0 chr13 102994159 102996502 -17287810 - L1Md_T LINE L1 0 6582 4240 7 1370 1093 167 406 0 chr13 102996514 102996807 -17287505 + Lx5 LINE L1 6636 7047 -3 7 1370 833 309 139 18 chr13 102997299 102997796 -17286516 - Lx8 LINE L1 0 7473 6917 7 1370 531 0 0 0 chr13 102997796 102997855 -17286457 + (TC)n Simple_repeat Simple_repeat 2 60 0 7 1370 1050 70 0 7 chr13 102997855 102997998 -17286314 - B1_Mus1 SINE Alu -1 147 6 7 1370 898 322 67 15 chr13 102997998 102998389 -17285923 - Lx8 LINE L1 -561 6912 6502 7 1370 510 61 0 0 chr13 102998401 102998467 -17285845 + (TA)n Simple_repeat Simple_repeat 2 67 0 7 1370 265 250 82 49 chr13 102998479 102998601 -17285711 - Lx8 LINE L1 -1284 6189 6064 7 1370 1169 259 0 4 chr13 102998623 102998863 -17285449 + 7SK RNA RNA 1 239 -92 7 1370 23 0 0 0 chr13 102998863 102998886 -17285426 + AT_rich Low_complexity Low_complexity 1 23 0 7 1370 24 32 0 0 chr13 103000411 103000442 -17283870 + AT_rich Low_complexity Low_complexity 1 31 0 1 1370 206 32 0 31 chr13 103000550 103000582 -17283730 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2 1370 477 0 0 0 chr13 103001975 103002028 -17282284 + (GGA)n Simple_repeat Simple_repeat 2 54 0 3 1370 778 178 12 0 chr13 103002053 103002216 -17282096 + CT-rich Low_complexity Low_complexity 2 166 0 4 1370 220 313 47 24 chr13 103003077 103003162 -17281150 + MIR SINE MIR 69 155 -107 5 1370 422 301 20 54 chr13 103003414 103003618 -17280694 + B3A SINE B2 2 198 0 6 1370 230 327 52 52 chr13 103004299 103004415 -17279897 + MIR3 SINE MIR 42 157 -51 7 1370 1384 270 13 56 chr13 103004901 103005297 -17279015 - MTEa LTR MaLR 0 379 1 8 1370 357 323 115 79 chr13 103005615 103005981 -17278331 - MTE2a LTR MaLR 0 379 1 9 1370 1932 212 111 35 chr13 103006105 103006221 -17278091 - Lx9 LINE L1 -15 7629 7519 1 1370 537 16 0 0 chr13 103006221 103006283 -17278029 + (TA)n Simple_repeat Simple_repeat 2 63 0 1 1370 1932 212 111 35 chr13 103006283 103006742 -17277570 - Lx9 LINE L1 -126 7518 7010 1 1370 280 273 71 0 chr13 103006738 103006837 -17277475 - RMER1B Other Other -912 154 49 1 1370 407 285 0 9 chr13 103007162 103007269 -17277043 - ID4 SINE ID -43 109 6 1 1370 1301 287 29 50 chr13 103007624 103008002 -17276310 - MTE2b LTR MaLR -4 375 6 1 1370 1250 221 96 23 chr13 103008007 103008392 -17275920 - RCHARR1 DNA MER1_type -69 905 493 1 1370 1023 300 77 16 chr13 103008481 103008911 -17275401 + RCHARR1 DNA MER1_type 43 498 -476 1 1370 699 291 46 0 chr13 103008916 103009112 -17275200 + B3 SINE B2 7 211 -5 1 1370 794 282 165 0 chr13 103009249 103009497 -17274815 + B4A SINE B4 1 289 -3 1 1370 7078 86 4 8 chr13 103010631 103011964 -17272348 - L1_Mus2 LINE L1 -1 6565 5234 1 1370 16420 138 32 25 chr13 103011963 103015543 -17268769 - L1_Mus2 LINE L1 -1895 3988 395 1 1370 294 109 0 59 chr13 103015740 103015808 -17268504 + GA-rich Low_complexity Low_complexity 3 66 0 2 1370 1417 278 49 77 chr13 103017018 103017709 -17266603 - L1MA7 LINE L1 0 6291 5620 2 1370 475 307 35 7 chr13 103017717 103017858 -17266454 - B1F2 SINE Alu -4 145 1 2 1370 379 276 30 7 chr13 103017858 103017993 -17266319 - L1MA7 LINE L1 -675 5616 5479 2 1370 411 331 102 0 chr13 103018021 103018148 -17266164 + B3A SINE B2 16 155 -43 2 1370 650 293 19 5 chr13 103018151 103018357 -17265955 + Lx8 LINE L1 6811 7019 -454 2 1370 573 15 0 0 chr13 103019902 103019968 -17264344 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2 1370 527 43 14 0 chr13 103020055 103020125 -17264187 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 1370 559 292 97 29 chr13 103020132 103020628 -17263684 - L1M2 LINE L1 -530 5767 5217 2 1370 338 335 35 35 chr13 103021403 103021601 -17262711 + MER5C DNA MER1_type 16 213 -100 2 1370 367 336 94 69 chr13 103021843 103022212 -17262100 - MLT1A1 LTR MaLR 0 365 3 2 1371 530 94 24 0 chr13 103022827 103022912 -17261400 + (TATG)n Simple_repeat Simple_repeat 2 88 0 3 1371 259 269 43 36 chr13 103022914 103023053 -17261259 + L1ME4a LINE L1 5936 6075 -49 3 1371 731 216 122 0 chr13 103024248 103024452 -17259860 - Lx9 LINE L1 -239 7405 7177 3 1371 824 159 15 36 chr13 103024439 103024635 -17259677 + Lx9 LINE L1 7411 7602 -42 3 1371 948 145 0 0 chr13 103024660 103024819 -17259493 + (TA)n Simple_repeat Simple_repeat 2 160 0 3 1371 180 125 0 0 chr13 103024829 103024861 -17259451 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 3 1371 189 0 0 0 chr13 103025246 103025267 -17259045 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 3 1371 622 352 28 9 chr13 103025678 103025890 -17258422 + MER58A DNA MER1_type 5 220 -4 3 1371 520 353 60 47 chr13 103026121 103026353 -17257959 + B4A SINE B4 6 240 -52 3 1371 660 76 18 54 chr13 103026353 103026464 -17257848 - URR1B DNA MER1_type -9 216 110 3 1371 405 0 0 0 chr13 103026625 103026670 -17257642 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1371 677 164 0 0 chr13 103026930 103027040 -17257272 + B1_Mus1 SINE Alu 39 148 0 4 1371 229 326 116 0 chr13 103026933 103027071 -17257241 + MT2B LTR ERVL 198 351 -250 4 1371 180 0 0 0 chr13 103027455 103027475 -17256837 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1371 1150 82 0 6 chr13 103028510 103028669 -17255643 + B2_Mm2 SINE B2 5 162 -33 4 1371 243 0 0 0 chr13 103028671 103028698 -17255614 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 1371 576 102 261 7 chr13 103028724 103028862 -17255450 + Lx3_Mus LINE L1 6837 7009 0 4 1371 22 35 0 0 chr13 103028876 103028905 -17255407 + AT_rich Low_complexity Low_complexity 1 29 0 4 1371 325 193 182 58 chr13 103028988 103029109 -17255203 - Lx7 LINE L1 -4 7692 7557 4 1371 209 33 0 32 chr13 103029109 103029140 -17255172 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 4 1371 2723 191 83 38 chr13 103029142 103029801 -17254511 - Lx7 LINE L1 -203 7493 6805 4 1371 831 244 55 30 chr13 103030246 103030422 -17253890 - B3 SINE B2 -7 209 24 4 1371 2652 169 54 6 chr13 103030422 103030923 -17253389 + RLTR11A LTR ERVK 1 525 -3 5 1371 831 244 55 30 chr13 103030923 103030945 -17253367 - B3 SINE B2 -193 23 6 4 1371 198 118 0 0 chr13 103030966 103031000 -17253312 + (TTG)n Simple_repeat Simple_repeat 3 36 0 5 1371 327 25 0 0 chr13 103031000 103031040 -17253272 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 5 1371 1164 37 0 0 chr13 103031040 103031175 -17253137 - B1_Mus1 SINE Alu -13 135 1 5 1371 309 250 95 8 chr13 103031658 103031825 -17252487 - L1MA10 LINE L1 -8 6326 5995 5 1371 414 0 0 0 chr13 103032085 103032131 -17252181 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1371 1138 85 0 0 chr13 103032139 103032280 -17252032 - B1_Mus1 SINE Alu -6 142 2 5 1371 467 297 8 8 chr13 103032285 103032404 -17251908 - PB1D9 SINE Alu 0 120 2 5 1371 383 267 96 44 chr13 103032674 103032925 -17251387 - L1M4 LINE L1 -515 5664 5401 5 1371 646 100 49 69 chr13 103033002 103033148 -17251164 + ORR1A4 LTR MaLR 1 191 -203 5 1371 3189 101 58 2 chr13 103033148 103033646 -17250666 + L1VL4 LINE L1 243 768 -5534 6 1371 35319 24 0 8 chr13 103033647 103038641 -17245671 + L1Md_A LINE L1 643 5586 -297 6 1371 8425 34 0 1 chr13 103038641 103039638 -17244674 + L1Md_A LINE L1 5587 6582 0 6 1371 5903 76 80 2 chr13 103039641 103040694 -17243618 + L1VL4 LINE L1 753 1890 -1669 6 1371 5183 128 7 5 chr13 103040695 103041545 -17242767 + Lx2 LINE L1 5794 6645 -352 6 1371 1067 167 65 0 chr13 103041530 103041745 -17242567 + Lx2 LINE L1 6761 6989 -8 6 1371 1431 128 48 0 chr13 103041756 103041983 -17242329 + ORR1A4 LTR MaLR 92 329 0 6 1371 457 309 126 11 chr13 103042000 103042451 -17241861 - L1MD LINE L1 -841 5305 4803 6 1371 304 321 209 7 chr13 103042513 103042786 -17241526 - L1M4 LINE L1 -1437 4709 4382 5 1371 475 301 20 40 chr13 103042918 103043067 -17241245 - B1F1 SINE Alu -1 148 3 6 1371 29 0 0 0 chr13 103045233 103045262 -17239050 + AT_rich Low_complexity Low_complexity 1 29 0 6 1371 192 229 180 0 chr13 103046183 103046244 -17238068 + MER5B DNA MER1_type 2 73 -105 6 1371 238 317 112 28 chr13 103046251 103046358 -17237954 - Tigger5 DNA MER2_type 0 2406 2291 6 1371 262 325 117 16 chr13 103046416 103046544 -17237768 - Tigger5 DNA MER2_type -2258 148 8 6 1371 213 316 63 0 chr13 103046715 103046810 -17237502 - MER5A DNA MER1_type -75 114 14 6 1371 394 306 60 0 chr13 103046835 103046969 -17237343 - MER5A1 DNA MER1_type -6 160 19 7 1371 565 374 92 55 chr13 103048062 103048594 -17235718 - MER21B LTR ERV1 -85 778 227 7 1371 198 0 0 0 chr13 103048650 103048672 -17235640 + (CAA)n Simple_repeat Simple_repeat 3 24 0 7 1371 935 181 144 0 chr13 103049623 103049811 -17234501 + B3 SINE B2 2 216 0 7 1371 1183 153 113 0 chr13 103050277 103050480 -17233832 + URR1A DNA MER1_type 1 226 0 7 1371 387 0 0 0 chr13 103050696 103050739 -17233573 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1371 674 235 11 5 chr13 103050743 103050931 -17233381 - L1_Mur3 LINE L1 -1255 4625 4437 7 1371 1539 249 34 26 chr13 103050932 103051316 -17232996 + MTD LTR MaLR 3 389 -30 7 1371 446 326 32 38 chr13 103053091 103053276 -17231036 + MLT1B LTR MaLR 1 184 -206 7 1371 3682 91 11 9 chr13 103053297 103053841 -17230471 + L1_Mus4 LINE L1 6086 6630 -6 7 1371 291 114 0 0 chr13 103053874 103053918 -17230394 + (GGA)n Simple_repeat Simple_repeat 3 46 0 8 1371 204 125 0 0 chr13 103054004 103054036 -17230276 + (C)n Simple_repeat Simple_repeat 1 32 0 8 1371 355 141 68 40 chr13 103054050 103054124 -17230188 + MLT1B LTR MaLR 313 388 -2 7 1371 972 49 0 0 chr13 103054372 103054494 -17229818 + (CA)n Simple_repeat Simple_repeat 2 123 0 8 1371 508 256 49 82 chr13 103054535 103054623 -17229689 + MTC-int LTR MaLR 6 91 -1167 8 1371 201 39 0 0 chr13 103054623 103054649 -17229663 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8 1371 508 256 49 82 chr13 103054649 103054743 -17229569 + MTC-int LTR MaLR 92 182 -1076 8 1371 1445 273 47 11 chr13 103054799 103055180 -17229132 + MTD LTR MaLR 23 417 -2 8 1371 408 258 90 85 chr13 103055213 103055279 -17229033 + Lx8 LINE L1 7174 7230 -243 8 1371 257 20 80 0 chr13 103055279 103055329 -17228983 + (TTG)n Simple_repeat Simple_repeat 2 55 0 8 1371 408 258 90 85 chr13 103055329 103055474 -17228838 + Lx8 LINE L1 7231 7386 -87 8 1371 2198 231 58 17 chr13 103055961 103056499 -17227813 - RLTR20B2 LTR ERVK 0 560 1 8 1371 7900 160 36 16 chr13 103056501 103058100 -17226212 - MYSERV16_I-int LTR ERVK 0 2326 696 8 1371 270 0 0 0 chr13 103058328 103058358 -17225954 + (CA)n Simple_repeat Simple_repeat 2 31 0 8 1371 1042 54 7 13 chr13 103058978 103059128 -17225184 - L1Md_F2 LINE L1 -1 6581 6433 9 1371 303 237 43 25 chr13 103059213 103059542 -17224770 + (CA)n Simple_repeat Simple_repeat 1 335 0 9 1371 3185 60 7 7 chr13 103059561 103059982 -17224330 - BGLII LTR ERVK 0 421 1 9 1371 252 0 0 0 chr13 103060140 103060168 -17224144 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 9 1371 2256 114 6 0 chr13 103061128 103061452 -17222860 - ORR1A3 LTR MaLR 0 326 1 9 1371 252 0 0 0 chr13 103061453 103061481 -17222831 + (CA)n Simple_repeat Simple_repeat 2 29 0 9 1371 1668 302 67 26 chr13 103062529 103063498 -17220814 - Lx9 LINE L1 -401 7072 6070 9 1371 381 295 22 15 chr13 103063576 103063710 -17220602 - Lx9 LINE L1 -1672 5972 5838 9 1371 241 130 0 36 chr13 103064320 103064376 -17219936 + (TTTG)n Simple_repeat Simple_repeat 1 54 0 9 1371 324 0 0 0 chr13 103064377 103064413 -17219899 + (T)n Simple_repeat Simple_repeat 1 36 0 9 1371 243 0 0 0 chr13 103064929 103064956 -17219356 + (T)n Simple_repeat Simple_repeat 1 27 0 9 1371 1213 279 58 0 chr13 103065091 103065439 -17218873 + MTEa LTR MaLR 5 372 -7 1 1371 216 97 0 0 chr13 103065486 103065517 -17218795 + (CTCG)n Simple_repeat Simple_repeat 2 32 0 1 1371 190 262 0 23 chr13 103066751 103066794 -17217518 - MIR SINE MIR -59 149 108 1 1371 809 322 5 0 chr13 103066795 103066997 -17217315 + B4A SINE B4 90 292 0 1 1371 231 243 14 28 chr13 103067488 103067560 -17216752 + (CATA)n Simple_repeat Simple_repeat 4 74 0 1 1371 464 314 52 83 chr13 103067634 103067998 -17216314 - L1M4 LINE L1 -514 5665 5311 1 1371 568 306 60 34 chr13 103068072 103068258 -17216054 - L1M5 LINE L1 -358 5821 5629 1 1371 279 0 0 0 chr13 103068258 103068289 -17216023 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1371 568 306 60 34 chr13 103068289 103068518 -17215794 - L1M5 LINE L1 -551 5628 5396 1 1371 569 310 287 45 chr13 103068591 103068892 -17215420 + ORR1D1 LTR MaLR 1 374 0 1 1371 180 135 0 0 chr13 103068989 103069026 -17215286 + (TTG)n Simple_repeat Simple_repeat 3 39 0 1 1371 593 274 157 50 chr13 103069026 103069491 -17214821 - L1MC2 LINE L1 -140 6204 5690 1 1371 675 136 0 0 chr13 103069568 103069678 -17214634 + (TA)n Simple_repeat Simple_repeat 1 110 0 1 1371 504 250 50 50 chr13 103069686 103069867 -17214445 - L1MD LINE L1 -2425 5570 5390 1 1371 1282 195 61 145 chr13 103070003 103070304 -17214008 - ORR1D1 LTR MaLR 0 374 88 1 1371 2352 160 5 10 chr13 103070304 103070696 -17213616 - Lx4A LINE L1 0 7058 6669 1 1371 1282 195 61 145 chr13 103070696 103070775 -17213537 - ORR1D1 LTR MaLR -287 87 28 1 1371 1966 175 36 6 chr13 103070775 103071131 -17213181 - ORR1B2 LTR MaLR 0 367 1 1 1371 1282 195 61 145 chr13 103071131 103071157 -17213155 - ORR1D1 LTR MaLR -347 27 1 1 1371 394 262 26 24 chr13 103071375 103071563 -17212749 - L1MC2 LINE L1 -744 5402 5212 1 1371 1161 114 49 0 chr13 103071563 103071747 -17212565 - B2_Mm2 SINE B2 0 195 3 1 1371 322 293 44 68 chr13 103071747 103071851 -17212461 - L1MC2 LINE L1 -935 5211 5117 1 1371 240 152 72 7 chr13 103071852 103072004 -17212308 + (TA)n Simple_repeat Simple_repeat 2 163 0 1 1371 25 31 0 0 chr13 103072018 103072050 -17212262 + AT_rich Low_complexity Low_complexity 1 32 0 1 1371 2215 266 92 25 chr13 103072105 103073285 -17211027 - L1MC2 LINE L1 -2198 3948 2690 1 1371 262 296 0 0 chr13 103073400 103073481 -17210831 - L1ME3A LINE L1 -41 6132 6052 1 1371 1019 21 28 0 chr13 103073709 103073851 -17210461 + (TCTA)n Simple_repeat Simple_repeat 4 149 0 1 1371 266 120 13 39 chr13 103074042 103074120 -17210192 + T-rich Low_complexity Low_complexity 2 77 0 1 1371 356 298 154 23 chr13 103074282 103074457 -17209855 - MER3 DNA MER1_type -11 198 1 1 1371 1332 240 42 20 chr13 103074625 103075029 -17209283 - L1_Mur3 LINE L1 -1607 4273 3861 1 1371 342 0 0 0 chr13 103075301 103075339 -17208973 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1371 467 241 0 8 chr13 103075427 103075544 -17208768 + Lx8 LINE L1 6328 6443 -1030 1 1371 1570 307 40 40 chr13 103075525 103076333 -17207979 + Lx8 LINE L1 6666 7473 0 1 1371 555 162 0 0 chr13 103077495 103077637 -17206675 + CT-rich Low_complexity Low_complexity 2 143 0 1 1371 2892 277 65 30 chr13 103078459 103079510 -17204802 + Lx8 LINE L1 6385 7471 -2 1 1371 454 330 114 16 chr13 103079838 103080155 -17204157 - L1M2 LINE L1 -2542 3601 3254 1 1371 423 0 0 0 chr13 103080212 103080259 -17204053 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1371 243 79 0 0 chr13 103080272 103080310 -17204002 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 1 1371 620 319 32 12 chr13 103080329 103080732 -17203580 - L1M2 LINE L1 -2942 3201 2791 1 1371 329 306 66 41 chr13 103081033 103081275 -17203037 + L1M4c LINE L1 2151 2398 -3986 1 1371 227 159 0 0 chr13 103081970 103082014 -17202298 + Lx8 LINE L1 7423 7466 -7 1 1371 633 293 53 50 chr13 103083642 103083983 -17200329 - RLTR15 LTR ERVK -17 342 1 1 1371 549 295 60 35 chr13 103084629 103085064 -17199248 + L1M4c LINE L1 5131 5576 -803 1 1371 232 397 45 22 chr13 103085141 103085275 -17199037 - L2b LINE L2 0 3375 3239 1 1371 216 279 159 28 chr13 103086122 103086229 -17198083 - L2c LINE L2 -28 3359 3239 1 1371 200 258 15 0 chr13 103087347 103087413 -17196899 + GA-rich Low_complexity Low_complexity 4 70 0 1 1371 576 42 0 0 chr13 103087440 103087511 -17196801 + (GA)n Simple_repeat Simple_repeat 1 71 0 1 1371 610 276 14 7 chr13 103088296 103088442 -17195870 - ID_B1 SINE B4 0 224 78 1 1371 408 391 43 0 chr13 103088494 103088632 -17195680 - RSINE1 SINE B4 0 165 22 1 1371 303 333 80 9 chr13 103089699 103089811 -17194501 - MIR3 SINE MIR -4 204 85 1 1371 821 234 77 27 chr13 103090165 103090385 -17193927 + B4A SINE B4 1 231 -61 1 1371 273 302 83 41 chr13 103091014 103091159 -17193153 - L2a LINE L2 0 3426 3276 1 1371 239 286 124 0 chr13 103091814 103091919 -17192393 + MER113 DNA MER1_type 199 316 -205 1 1371 209 242 32 21 chr13 103093201 103093294 -17191018 + T-rich Low_complexity Low_complexity 3 96 0 1 1371 630 290 117 31 chr13 103096636 103096950 -17187362 - ORR1E LTR MaLR -33 337 3 1 1371 657 0 0 0 chr13 103097323 103097396 -17186916 + (TC)n Simple_repeat Simple_repeat 2 74 0 1 1371 806 268 29 20 chr13 103097407 103097651 -17186661 - Lx6 LINE L1 -2 7458 7213 1 1371 2889 175 19 16 chr13 103097648 103098287 -17186025 + Lx5 LINE L1 5310 5955 -1095 1 1371 389 285 45 38 chr13 103098587 103098744 -17185568 + MER5A1 DNA MER1_type 4 161 -5 1 1371 189 341 65 11 chr13 103099039 103099131 -17185181 + L2b LINE L2 3043 3139 -236 1 1371 765 221 0 0 chr13 103099131 103099262 -17185050 + B1_Mur2 SINE Alu 1 131 -18 1 1371 366 23 0 0 chr13 103099264 103099307 -17185005 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1371 6348 58 8 5 chr13 103099324 103100180 -17184132 - L1_Mus1 LINE L1 -1 6566 5708 1 1371 708 261 142 32 chr13 103100232 103100561 -17183751 + MTD LTR MaLR 10 404 -15 1 1371 21 0 0 0 chr13 103101166 103101187 -17183125 + AT_rich Low_complexity Low_complexity 1 21 0 1 1371 194 358 47 55 chr13 103102095 103102222 -17182090 + MIRb SINE MIR 38 163 -105 1 1371 283 345 47 28 chr13 103102293 103102505 -17181807 + MIR SINE MIR 1 216 -46 1 1371 261 73 0 0 chr13 103102625 103102666 -17181646 - L1_Mm LINE L1 -4038 1845 1805 1 1371 4009 38 0 0 chr13 103102666 103103141 -17181171 + L1Md_F2 LINE L1 6094 6568 -14 1 1371 234 105 0 0 chr13 103103392 103103430 -17180882 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1371 27 29 0 0 chr13 103103866 103103900 -17180412 + AT_rich Low_complexity Low_complexity 1 34 0 1 1371 228 67 0 0 chr13 103104746 103104776 -17179536 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 1 1371 1513 208 166 34 chr13 103104903 103105380 -17178932 - Lx5 LINE L1 -3 7047 6508 1 1371 19567 142 38 18 chr13 103105380 103109271 -17175041 - Lx5 LINE L1 -917 6133 2157 1 1371 668 307 111 61 chr13 103109682 103110595 -17173717 - L1M4 LINE L1 -409 5775 4811 1 1371 2201 38 0 8 chr13 103110595 103110861 -17173451 + L1Md_F2 LINE L1 6306 6569 -13 1 1371 668 309 142 48 chr13 103110861 103111323 -17172989 - L1M4 LINE L1 -1336 4810 4285 1 1371 207 0 0 0 chr13 103111408 103111431 -17172881 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1 1371 1148 75 7 0 chr13 103111679 103111825 -17172487 - B1_Mus1 SINE Alu 0 148 2 1 1371 331 282 84 0 chr13 103111837 103111943 -17172369 + MTEa LTR MaLR 253 366 -13 1 1371 297 304 10 11 chr13 103112043 103112165 -17172147 - L1M4 LINE L1 -2069 4077 3957 1 1371 414 196 0 0 chr13 103112866 103112973 -17171339 + (TG)n Simple_repeat Simple_repeat 2 108 0 1 1371 22 0 0 0 chr13 103112988 103113010 -17171302 + AT_rich Low_complexity Low_complexity 1 22 0 1 1371 245 333 0 13 chr13 103116176 103116255 -17168057 - ID4 SINE ID -5 78 1 1 1371 6030 117 33 9 chr13 103117481 103118414 -17165898 + RMER17B LTR ERVK 3 958 0 1 1371 186 71 0 0 chr13 103118812 103118840 -17165472 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 1 1371 426 39 0 0 chr13 103119568 103119620 -17164692 + (TCCC)n Simple_repeat Simple_repeat 2 53 0 1 1371 229 147 20 31 chr13 103119973 103120071 -17164241 + T-rich Low_complexity Low_complexity 4 100 0 1 1371 492 264 202 0 chr13 103120153 103120331 -17163981 - B3 SINE B2 0 216 3 1 1371 287 278 115 18 chr13 103120346 103120511 -17163801 - Lx8 LINE L1 0 7473 7293 1 1371 1320 289 22 20 chr13 103120691 103120989 -17163323 + MTEa LTR MaLR 13 315 -64 1 1371 2047 164 28 113 chr13 103120989 103121449 -17162863 + MTC LTR MaLR 1 421 0 1 1371 1320 289 22 20 chr13 103121449 103121506 -17162806 + MTEa LTR MaLR 316 369 -10 1 1371 3490 118 6 10 chr13 103122826 103123339 -17160973 + Lx4A LINE L1 6547 7057 -1 1 1371 504 192 0 0 chr13 103123341 103123445 -17160867 + (TA)n Simple_repeat Simple_repeat 1 104 0 1 1371 180 0 0 0 chr13 103123469 103123489 -17160823 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1 1371 212 59 29 0 chr13 103123499 103123533 -17160779 + (TA)n Simple_repeat Simple_repeat 1 35 0 1 1371 6349 52 5 0 chr13 103123968 103124756 -17159556 - L1Md_F2 LINE L1 0 6582 5791 1 1371 273 292 14 14 chr13 103124757 103124830 -17159482 + L2b LINE L2 3105 3177 -198 1 1371 1068 245 108 9 chr13 103126100 103126433 -17157879 - ORR1D2 LTR MaLR 0 370 5 1 1371 405 0 0 0 chr13 103126495 103126540 -17157772 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1371 653 198 69 0 chr13 103126590 103126706 -17157606 + B1_Mm SINE Alu 3 126 -21 1 1371 849 20 0 0 chr13 103126935 103127034 -17157278 + (TAGA)n Simple_repeat Simple_repeat 1 99 0 1 1371 650 12 12 0 chr13 103127034 103127080 -17157232 + (CAGG)n Simple_repeat Simple_repeat 4 49 0 1 1371 1115 42 14 0 chr13 103127080 103127224 -17157088 + (TAGA)n Simple_repeat Simple_repeat 2 147 0 1 1371 650 12 12 0 chr13 103127224 103127258 -17157054 + (CAGG)n Simple_repeat Simple_repeat 2 35 0 1 1371 1093 35 21 0 chr13 103127258 103127403 -17156909 + (TAGA)n Simple_repeat Simple_repeat 2 149 0 1 1371 226 241 38 12 chr13 103128755 103128835 -17155477 - L1_Mm LINE L1 -2039 3844 3763 1 1371 239 319 42 0 chr13 103129469 103129541 -17154771 - ORR1E LTR MaLR -235 124 50 1 1371 293 309 76 51 chr13 103129524 103129681 -17154631 - ORR1E LTR MaLR -198 161 1 1 1371 225 0 0 0 chr13 103129829 103129854 -17154458 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 1 1371 401 0 20 0 chr13 103130509 103130558 -17153754 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1371 551 338 13 20 chr13 103130560 103130711 -17153601 - RSINE1 SINE B4 -12 153 4 1 1371 186 43 0 0 chr13 103130973 103130996 -17153316 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1371 1068 58 0 7 chr13 103130996 103131135 -17153177 - B1_Mus1 SINE Alu 0 148 11 2 1371 236 228 6 45 chr13 103131261 103131417 -17152895 + CT-rich Low_complexity Low_complexity 6 155 0 2 1371 256 271 152 30 chr13 103132188 103132287 -17152025 + PB1D10 SINE Alu 6 116 -1 2 1371 283 106 15 15 chr13 103133588 103133655 -17150657 + (TTTTTG)n Simple_repeat Simple_repeat 6 72 0 2 1371 2291 221 45 6 chr13 103134631 103135164 -17149148 - Lx9 LINE L1 -377 7267 6714 2 1371 1155 209 92 42 chr13 103135151 103135511 -17148801 + Lx9 LINE L1 7266 7643 -1 2 1371 261 0 0 0 chr13 103135949 103135978 -17148334 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1371 247 98 59 0 chr13 103137091 103137142 -17147170 + (CATG)n Simple_repeat Simple_repeat 2 55 0 2 1371 316 238 69 31 chr13 103137162 103137292 -17147020 + (CATG)n Simple_repeat Simple_repeat 2 136 0 2 1371 229 256 11 11 chr13 103137434 103137521 -17146791 + L1M3 LINE L1 4918 5004 -1136 2 1371 32 26 0 0 chr13 103137527 103137566 -17146746 + AT_rich Low_complexity Low_complexity 1 39 0 2 1371 7844 147 59 3 chr13 103139971 103141387 -17142925 - Lx4A LINE L1 -9 7049 5559 2 1371 3038 106 9 0 chr13 103141386 103141847 -17142465 + Lx4A LINE L1 5100 5564 -313 2 1371 639 152 0 0 chr13 103143128 103143240 -17141072 + GA-rich Low_complexity Low_complexity 2 113 0 2 1371 626 280 31 19 chr13 103143289 103143449 -17140863 - B3A SINE B2 -36 162 1 2 1371 189 0 0 0 chr13 103143490 103143511 -17140801 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1371 391 324 42 18 chr13 103143532 103143749 -17140563 - L1MEc LINE L1 -4052 2348 2127 2 1371 238 239 43 118 chr13 103144241 103144402 -17139910 + MLT1B LTR MaLR 260 408 0 2 1371 368 231 42 37 chr13 103144876 103145034 -17139278 + L1MC LINE L1 5602 5779 -580 2 1371 211 157 19 19 chr13 103145475 103145527 -17138785 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1371 489 341 57 26 chr13 103146372 103146757 -17137555 - Lx9 LINE L1 -169 7475 7079 2 1371 1603 27 21 0 chr13 103146942 103147130 -17137182 + B2_Mm1t SINE B2 2 193 0 2 1371 347 252 135 15 chr13 103147172 103147305 -17137007 - L1ME2 LINE L1 -221 5943 5795 2 1371 555 144 25 0 chr13 103147701 103147765 -17136547 + polypurine Low_complexity Low_complexity 3 66 0 2 1371 1071 117 0 0 chr13 103147765 103147945 -17136367 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 2 1371 555 144 25 0 chr13 103147945 103147998 -17136314 + polypurine Low_complexity Low_complexity 67 122 0 2 1371 408 313 67 3 chr13 103148546 103148831 -17135481 - L1MD LINE L1 -3555 2591 2289 2 1371 699 319 83 14 chr13 103149080 103149103 -17135209 - MTEa LTR MaLR 0 379 354 2 1371 1314 77 14 88 chr13 103149103 103149338 -17134974 + L1Md_F3 LINE L1 6374 6584 0 2 1371 699 319 83 14 chr13 103149338 103149603 -17134709 - MTEa LTR MaLR -26 353 71 2 1371 697 226 24 42 chr13 103149893 103150059 -17134253 + RSINE1 SINE B4 3 165 0 2 1371 261 0 0 0 chr13 103150061 103150090 -17134222 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 2 171 38609 16 1 6 chr13 103151820 103158200 -17126112 - L1Md_A LINE L1 -1 6581 238 2 1372 346 338 45 15 chr13 103158200 103158332 -17125980 + MLT1G1 LTR MaLR 444 579 0 2 1372 506 200 87 8 chr13 103158589 103158715 -17125597 - MTC-int LTR MaLR -1121 137 2 2 1372 242 236 73 0 chr13 103158768 103158823 -17125489 - MTD LTR MaLR -104 315 257 2 1372 8296 30 1 9 chr13 103158933 103159925 -17124387 + L1Md_F3 LINE L1 5587 6570 -14 2 1372 748 86 26 0 chr13 103159962 103160079 -17124233 + (GAAA)n Simple_repeat Simple_repeat 2 121 0 2 1372 492 252 16 16 chr13 103160125 103160250 -17124062 - MTD LTR MaLR -294 125 1 2 1372 214 325 59 24 chr13 103160404 103160489 -17123823 + PB1D10 SINE Alu 29 116 -1 2 1372 1701 223 0 16 chr13 103161654 103161977 -17122335 + ORR1D1 LTR MaLR 1 318 -56 2 1372 416 302 22 0 chr13 103163716 103163842 -17120470 + B1F1 SINE Alu 1 132 -15 2 1372 750 94 0 0 chr13 103163846 103163963 -17120349 + (CAGAGA)n Simple_repeat Simple_repeat 2 118 0 2 1372 210 71 0 0 chr13 103163964 103163992 -17120320 + (GGA)n Simple_repeat Simple_repeat 2 29 0 2 1372 201 77 0 71 chr13 103164449 103164478 -17119834 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 2 1372 333 0 0 0 chr13 103164478 103164515 -17119797 + (CTA)n Simple_repeat Simple_repeat 1 37 0 2 1372 201 77 0 71 chr13 103164515 103164541 -17119771 + (CAAAAA)n Simple_repeat Simple_repeat 6 30 0 2 1372 339 281 30 104 chr13 103164752 103164887 -17119425 + RMER10B LTR ERVL 271 395 -3 2 1372 261 83 0 0 chr13 103164887 103164923 -17119389 + (CAT)n Simple_repeat Simple_repeat 1 36 0 2 1372 381 43 0 0 chr13 103164971 103165018 -17119294 + (TATG)n Simple_repeat Simple_repeat 1 47 0 2 1372 2517 197 19 62 chr13 103165067 103165634 -17118678 - RMER15 LTR ERVL -32 543 1 2 1372 576 318 12 0 chr13 103165634 103165805 -17118507 + MTC LTR MaLR 23 195 -226 2 1372 332 179 40 74 chr13 103165826 103166001 -17118311 + (TTATA)n Simple_repeat Simple_repeat 5 173 0 2 1372 489 288 52 42 chr13 103166011 103166203 -17118109 + MTC LTR MaLR 224 417 -2 2 1372 186 43 0 0 chr13 103166926 103166949 -17117363 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1372 483 142 19 13 chr13 103168935 103169058 -17115254 + L1_Mur1 LINE L1 5123 5252 -634 2 1372 301 312 98 7 chr13 103169142 103169429 -17114883 + L1MD LINE L1 4940 5252 -894 2 1372 358 261 124 44 chr13 103169636 103169909 -17114403 + L1MA7 LINE L1 5996 6290 -1 2 1372 611 303 118 37 chr13 103169963 103170481 -17113831 + L1ME1 LINE L1 5425 5984 -195 2 1372 385 353 57 25 chr13 103170528 103170685 -17113627 + RSINE1 SINE B4 2 163 -2 2 1372 207 0 0 0 chr13 103170954 103170977 -17113335 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1372 998 262 70 18 chr13 103171052 103171324 -17112988 + MTEa LTR MaLR 83 368 -11 2 1372 1367 138 66 40 chr13 103171572 103171874 -17112438 - Lx4B LINE L1 -820 6238 5929 2 1372 842 248 4 60 chr13 103172484 103172652 -17111660 + Lx8 LINE L1 7107 7275 -198 2 1372 1250 167 9 13 chr13 103172652 103172876 -17111436 + URR1B DNA MER1_type 3 225 0 2 1372 842 248 4 60 chr13 103172876 103172956 -17111356 + Lx8 LINE L1 7276 7341 -132 2 1372 431 222 0 18 chr13 103173002 103173112 -17111200 - Lx9 LINE L1 -604 7040 6933 2 1372 756 242 20 15 chr13 103173111 103173308 -17111004 - Lx9 LINE L1 -1047 6597 6400 2 1372 1117 230 92 30 chr13 103173324 103173660 -17110652 + Lx9 LINE L1 7100 7456 -188 2 1372 232 208 21 0 chr13 103174895 103174943 -17109369 - RLTR22_Mus LTR ERVK -509 1299 1251 2 1372 363 23 0 0 chr13 103175774 103175818 -17108494 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1372 2840 78 3 0 chr13 103176261 103176648 -17107664 - L1_Mus3 LINE L1 -132 5751 5364 2 1372 6457 78 9 3 chr13 103176648 103177515 -17106797 + L1_Mus3 LINE L1 5766 6637 -1 2 1372 180 0 0 0 chr13 103177562 103177582 -17106730 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1372 291 324 85 16 chr13 103178029 103178277 -17106035 - L1ME2 LINE L1 -46 6118 5854 2 1372 348 339 64 40 chr13 103178527 103178825 -17105487 + L1MB1 LINE L1 5707 6011 -157 2 1372 1134 279 97 99 chr13 103178827 103179352 -17104960 + MT2A LTR ERVL 10 533 0 2 1372 331 258 0 20 chr13 103179352 103179451 -17104861 + L1MB1 LINE L1 6017 6113 -55 2 1372 493 297 113 36 chr13 103179529 103179979 -17104333 - L1ME2 LINE L1 -424 5738 5254 2 1372 1109 132 91 24 chr13 103180333 103180543 -17103769 + URR1B DNA MER1_type 1 224 -1 2 1372 252 253 27 0 chr13 103182726 103182801 -17101511 - Lx8 LINE L1 -352 7121 7045 2 1372 288 53 0 0 chr13 103183121 103183159 -17101153 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1372 526 311 65 29 chr13 103183165 103183443 -17100869 - B4A SINE B4 -4 288 1 2 1372 23 54 0 0 chr13 103183635 103183672 -17100640 + AT_rich Low_complexity Low_complexity 1 37 0 2 1372 32725 69 2 6 chr13 103183769 103187988 -17096324 + L1Md_F3 LINE L1 439 4611 -1272 2 1372 2232 0 0 0 chr13 103187988 103188234 -17096078 + L1Md_A LINE L1 6337 6582 0 2 1372 32725 50 1 7 chr13 103188234 103189226 -17095086 + L1Md_F3 LINE L1 4612 5586 -297 2 1372 8360 34 1 1 chr13 103189226 103190224 -17094088 + L1Md_F3 LINE L1 5587 6584 0 2 1372 33797 35 0 0 chr13 103191284 103196917 -17087395 + L1Md_T LINE L1 1 5589 -297 2 1372 9035 5 0 0 chr13 103196917 103197938 -17086374 + L1Md_T LINE L1 5590 6585 0 2 1372 354 280 0 0 chr13 103198313 103198420 -17085892 - Lx9 LINE L1 -216 7428 7322 2 1372 650 295 41 31 chr13 103198441 103198731 -17085581 - Looper DNA PiggyBac -1166 392 100 2 1372 749 168 90 16 chr13 103198743 103198931 -17085381 + L1_Mur3 LINE L1 523 724 -6988 2 1372 3827 188 97 61 chr13 103198961 103199760 -17084552 - RLTR42-int LTR ERVK -1043 4479 3670 2 1372 791 154 274 0 chr13 103199760 103199935 -17084377 - URR1B DNA MER1_type 0 225 3 2 1372 3827 188 97 61 chr13 103199935 103200357 -17083955 - RLTR42-int LTR ERVK -1853 3669 3214 2 1372 5036 162 96 11 chr13 103200363 103202148 -17082164 + L1_Mur3 LINE L1 299 2229 -3651 2 1372 449 210 74 25 chr13 103203227 103203349 -17080963 - L1M2 LINE L1 -727 5573 5446 2 1372 3077 47 18 0 chr13 103205293 103205676 -17078636 - RLTR10 LTR ERVK 0 390 1 2 1372 15433 31 15 31 chr13 103205678 103207710 -17076602 - RLTR10-int LTR ERVK -3 1984 9 2 1372 3033 55 18 0 chr13 103207711 103208094 -17076218 - RLTR10 LTR ERVK 0 390 1 2 1372 191 192 12 37 chr13 103208465 103208546 -17075766 + GA-rich Low_complexity Low_complexity 3 81 0 2 1372 180 0 0 0 chr13 103208734 103208754 -17075558 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1372 3833 44 0 0 chr13 103209218 103209674 -17074638 - L1Md_T LINE L1 0 6582 6127 2 1372 3478 10 0 0 chr13 103209674 103210091 -17074221 + L1_Mm LINE L1 3673 4089 -1794 2 1372 235 295 16 0 chr13 103210653 103210714 -17073598 - MER94 DNA AcHobo -25 109 48 2 1372 279 284 124 42 chr13 103213832 103214055 -17070257 + MIR SINE MIR 34 262 0 2 1372 913 322 10 94 chr13 103214272 103214759 -17069553 + Lx8 LINE L1 6246 6691 -782 2 1372 205 201 82 14 chr13 103214809 103214955 -17069357 + (ATATG)n Simple_repeat Simple_repeat 2 157 0 2 1372 3183 36 18 5 chr13 103214983 103215374 -17068938 + MTA_Mm LTR MaLR 1 396 0 2 1372 739 325 104 26 chr13 103215466 103215927 -17068385 + Lx8 LINE L1 6832 7328 -145 2 1372 1062 38 15 0 chr13 103218416 103218547 -17065765 + B1_Mus1 SINE Alu 2 134 -14 2 1372 564 116 0 0 chr13 103218549 103218635 -17065677 + (TA)n Simple_repeat Simple_repeat 2 87 0 2 1372 310 308 136 71 chr13 103220371 103220679 -17063633 + Tigger16a DNA Tigger 482 809 -124 2 1372 1542 192 35 0 chr13 103221921 103222181 -17062131 - MTC LTR MaLR 0 421 153 2 1372 2153 122 19 44 chr13 103222382 103222989 -17061323 + RMER17A LTR ERVK 1 809 0 2 1372 464 0 18 0 chr13 103224930 103224986 -17059326 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1372 2279 133 113 81 chr13 103226733 103227165 -17057147 - RLTR41 LTR ERV1 0 446 1 2 1372 293 273 113 65 chr13 103227200 103227431 -17056881 - MIRc SINE MIR -15 253 12 3 1372 788 310 108 9 chr13 103228204 103228536 -17055776 + MLT1A0 LTR MaLR 1 365 0 3 1372 291 342 25 8 chr13 103229206 103229327 -17054985 - MLT1A0 LTR MaLR -242 123 1 3 1372 1502 247 22 27 chr13 103229515 103229885 -17054427 - ORR1D2 LTR MaLR -2 368 1 3 1372 239 322 68 75 chr13 103230808 103230969 -17053343 + RSINE1 SINE B4 6 165 0 3 1372 226 321 61 52 chr13 103231469 103231584 -17052728 - Lx8 LINE L1 -147 7326 7211 3 1372 251 0 59 0 chr13 103231624 103231658 -17052654 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 3 1372 457 291 122 64 chr13 103232752 103232954 -17051358 - L1M5 LINE L1 -361 5801 5591 3 1372 1493 40 0 6 chr13 103232954 103233131 -17051181 + L1_Mus1 LINE L1 6392 6567 0 3 1372 457 291 122 64 chr13 103233131 103233413 -17050899 - L1M5 LINE L1 -572 5590 5289 3 1372 844 273 52 31 chr13 103233995 103234282 -17050030 - MER2 DNA MER2_type -52 293 1 3 1372 234 212 0 43 chr13 103234333 103234402 -17049910 - L1M5 LINE L1 -3138 3008 2943 3 1372 551 168 212 0 chr13 103234435 103234548 -17049764 - B1_Mus1 SINE Alu -2 146 10 3 1372 274 265 76 17 chr13 103234561 103234680 -17049632 - L1M5 LINE L1 -3207 2939 2814 3 1372 275 255 96 19 chr13 103234698 103234854 -17049458 - Lx9 LINE L1 -1 7643 7476 3 1372 6216 78 14 10 chr13 103234860 103235659 -17048653 - L1_Mus4 LINE L1 -8 6628 5827 3 1372 726 262 145 50 chr13 103237104 103237241 -17047071 - MTD LTR MaLR -11 389 205 3 1372 239 71 24 0 chr13 103237241 103237283 -17047029 + (CTTG)n Simple_repeat Simple_repeat 3 45 0 3 1372 726 254 91 38 chr13 103237283 103237444 -17046868 - MTD LTR MaLR -189 230 55 3 1372 446 303 221 11 chr13 103237813 103238093 -17046219 + L2 LINE L2 2520 2858 -561 3 1372 24 85 0 0 chr13 103238659 103238718 -17045594 + AT_rich Low_complexity Low_complexity 1 59 0 3 1372 836 152 7 0 chr13 103239091 103239242 -17045070 + CT-rich Low_complexity Low_complexity 2 153 0 3 1372 195 177 127 16 chr13 103239249 103239312 -17045000 - MIR SINE MIR -113 149 80 3 1372 260 246 29 14 chr13 103239537 103239607 -17044705 + MER117 DNA MER1_type 4 74 -123 3 1372 1043 234 35 45 chr13 103239777 103240125 -17044187 - RLTR33 LTR ERVK -87 591 165 3 1372 321 27 0 0 chr13 103240582 103240619 -17043693 - L1Md_A LINE L1 -206 6376 6340 3 1372 1776 5 0 0 chr13 103240619 103240810 -17043502 + L1Md_A LINE L1 6392 6582 0 3 1372 283 304 109 15 chr13 103241892 103242029 -17042283 - MIRb SINE MIR -7 255 106 3 1372 351 268 0 93 chr13 103242198 103242305 -17042007 + MTEa LTR MaLR 13 109 -270 3 1372 312 342 93 40 chr13 103242337 103242590 -17041722 + ORR1E LTR MaLR 53 323 -36 3 1372 243 189 151 67 chr13 103242972 103243091 -17041221 + RLTR20B1 LTR ERVK 109 237 -326 3 1372 5131 22 0 0 chr13 103243171 103243755 -17040557 + L1Md_T LINE L1 5003 5586 -297 3 1372 8852 36 6 0 chr13 103243756 103244745 -17039567 + L1Md_T LINE L1 5588 6582 0 3 1372 245 273 0 0 chr13 103245452 103245507 -17038805 + RLTR25B LTR ERVK 128 182 -846 3 1372 3568 161 32 28 chr13 103245507 103246272 -17038040 + RLTR25B LTR ERVK 155 1028 0 3 1372 762 224 0 13 chr13 103246327 103246481 -17037831 + URR1B DNA MER1_type 1 152 -73 3 1372 2149 132 60 3 chr13 103246485 103246818 -17037494 + Lx2 LINE L1 6646 6997 0 3 1372 2530 166 0 10 chr13 103247046 103247454 -17036858 - MTC LTR MaLR -8 413 10 3 1372 367 239 32 49 chr13 103247992 103248115 -17036197 + L1MEc LINE L1 32 152 -6248 3 1372 718 222 15 0 chr13 103249794 103249929 -17034383 - B3 SINE B2 0 216 80 3 1372 180 176 0 0 chr13 103250922 103250956 -17033356 + CT-rich Low_complexity Low_complexity 4 37 0 3 1372 414 0 0 0 chr13 103253974 103254020 -17030292 + (TC)n Simple_repeat Simple_repeat 1 46 0 3 1372 390 21 0 0 chr13 103254020 103254067 -17030245 + (TG)n Simple_repeat Simple_repeat 1 47 0 3 1372 210 150 0 0 chr13 103254488 103254528 -17029784 + (TTTTTG)n Simple_repeat Simple_repeat 4 43 0 3 1372 443 274 32 0 chr13 103254543 103254638 -17029674 - B1F SINE Alu -51 98 1 3 1372 658 256 8 0 chr13 103254868 103255001 -17029311 + ORR1D2 LTR MaLR 1 134 -236 3 1372 320 280 43 0 chr13 103254999 103255092 -17029220 + ORR1D2 LTR MaLR 274 370 0 3 1372 5466 232 36 27 chr13 103255092 103256450 -17027862 + ORR1D2-int LTR MaLR 1 1370 0 3 1372 1409 232 84 53 chr13 103256450 103256809 -17027503 + ORR1D2 LTR MaLR 1 370 0 3 1372 185 65 32 0 chr13 103257467 103257498 -17026814 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 3 1372 270 0 0 0 chr13 103257677 103257707 -17026605 + (TTTA)n Simple_repeat Simple_repeat 4 33 0 3 1372 349 250 19 0 chr13 103258433 103258537 -17025775 - Lx9 LINE L1 -8 7636 7531 3 1372 567 78 0 0 chr13 103258539 103258616 -17025696 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1372 236 196 0 0 chr13 103258616 103258662 -17025650 - Lx9 LINE L1 -187 7457 7412 3 1372 960 294 110 15 chr13 103258668 103259141 -17025171 + L1MA4 LINE L1 5662 6179 -121 3 1372 341 174 14 14 chr13 103259404 103259474 -17024838 + RMER15 LTR ERVL 3 72 -503 3 1372 1871 239 92 19 chr13 103259498 103260010 -17024302 + RMER15 LTR ERVL 27 575 0 3 1372 231 333 15 0 chr13 103261070 103261136 -17023176 + ID4_ SINE ID 2 68 -15 3 1372 336 83 0 0 chr13 103261193 103261241 -17023071 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1372 2647 121 2 2 chr13 103261967 103262388 -17021924 + L1_Mm LINE L1 1644 2064 -3819 3 1372 36481 46 0 3 chr13 103262387 103267894 -17016418 + L1Md_T LINE L1 5 5589 -297 3 1372 8996 34 0 0 chr13 103267894 103268890 -17015422 + L1Md_T LINE L1 5590 6585 0 3 1372 26557 94 8 4 chr13 103268890 103273403 -17010909 + L1_Mus1 LINE L1 2034 6567 0 3 1372 224 288 26 15 chr13 103273623 103273714 -17010598 - MIRc SINE MIR -51 157 67 3 1372 336 262 0 132 chr13 103273973 103274103 -17010209 - B1F1 SINE Alu -1 119 5 3 1372 32 43 0 0 chr13 103274107 103274153 -17010159 + AT_rich Low_complexity Low_complexity 1 46 0 3 1372 961 233 97 97 chr13 103275172 103275272 -17009040 + B4 SINE B4 3 82 -210 3 1372 270 0 0 0 chr13 103275272 103275302 -17009010 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1372 961 233 97 97 chr13 103275302 103275491 -17008821 + B4 SINE B4 83 292 0 3 1372 474 196 0 0 chr13 103275491 103275603 -17008709 + (CA)n Simple_repeat Simple_repeat 1 112 0 3 1372 21 36 0 0 chr13 103275616 103275644 -17008668 + AT_rich Low_complexity Low_complexity 1 28 0 3 1372 233 374 62 12 chr13 103275757 103275917 -17008395 + MIR SINE MIR 47 214 -48 3 1372 422 322 58 66 chr13 103276330 103276556 -17007756 - LTR16B2 LTR ERVL -98 364 141 3 1372 536 200 8 0 chr13 103276567 103276687 -17007625 + GA-rich Low_complexity Low_complexity 3 123 0 3 1372 242 384 14 43 chr13 103277452 103277591 -17006721 + MIR3 SINE MIR 71 205 -3 3 1372 184 356 39 29 chr13 103278352 103278456 -17005856 + MIRb SINE MIR 164 268 0 3 1372 962 110 17 6 chr13 103278885 103279059 -17005253 + (GGA)n Simple_repeat Simple_repeat 3 178 0 3 1372 337 360 61 11 chr13 103279323 103279503 -17004809 + MIRb SINE MIR 7 195 -73 3 1372 347 353 87 0 chr13 103279555 103279739 -17004573 - Tigger7 DNA MER2_type 0 2491 2292 3 1372 296 262 12 23 chr13 103279988 103280074 -17004238 - MER58C DNA MER1_type -2 213 129 3 1372 289 320 20 10 chr13 103280085 103280183 -17004129 - MER58C DNA MER1_type -116 99 1 3 1372 1313 108 27 5 chr13 103281492 103281679 -17002633 - B2_Mm2 SINE B2 -4 191 1 3 1372 1207 266 132 19 chr13 103281833 103282158 -17002154 + MTE2b LTR MaLR 7 368 -11 3 1372 450 0 0 0 chr13 103282212 103282262 -17002050 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1372 545 337 45 58 chr13 103282509 103282906 -17001406 - MLT2D LTR ERVL 0 414 23 3 1372 3091 183 50 35 chr13 103282908 103283474 -17000838 + RMER15 LTR ERVL 2 575 0 3 1372 2833 126 28 5 chr13 103283744 103284409 -16999903 - L1VL4 LINE L1 -2352 1207 526 3 1372 350 74 0 18 chr13 103284577 103284632 -16999680 + (GA)n Simple_repeat Simple_repeat 1 54 0 3 1373 1444 152 14 0 chr13 103285769 103285992 -16998320 + URR1A DNA MER1_type 1 226 0 3 1373 946 273 29 14 chr13 103286067 103286413 -16997899 - L1MA4 LINE L1 -382 5918 5568 3 1373 827 357 62 39 chr13 103286436 103286955 -16997357 + MT2A LTR ERVL 3 533 0 3 1373 299 286 34 0 chr13 103286960 103287096 -16997216 - L1MA4 LINE L1 -812 5485 5347 3 1373 221 182 45 11 chr13 103287333 103287422 -16996890 + CT-rich Low_complexity Low_complexity 4 95 0 3 1373 555 252 61 8 chr13 103287429 103287561 -16996751 - B1_Mur2 SINE Alu -5 144 6 3 1373 264 219 75 94 chr13 103287469 103287575 -16996737 - MT2B LTR ERVL -344 257 154 3 1373 252 0 0 0 chr13 103287747 103287775 -16996537 + (TG)n Simple_repeat Simple_repeat 1 28 0 3 1373 378 107 0 0 chr13 103287775 103287831 -16996481 + (GA)n Simple_repeat Simple_repeat 2 57 0 3 1373 387 0 0 0 chr13 103288119 103288162 -16996150 + (TCTA)n Simple_repeat Simple_repeat 1 43 0 3 1373 249 317 49 10 chr13 103288243 103288345 -16995967 - L2c LINE L2 -100 3287 3182 3 1373 614 241 62 41 chr13 103289403 103289634 -16994678 - ORR1E LTR MaLR -138 232 4 3 1373 565 289 10 91 chr13 103289901 103290099 -16994213 + B3A SINE B2 1 182 -16 3 1373 381 253 12 12 chr13 103290226 103290306 -16994006 + ID4_ SINE ID 1 80 -3 3 1373 744 206 0 7 chr13 103290540 103290677 -16993635 + B1_Mur2 SINE Alu 6 141 -8 3 1373 456 92 11 33 chr13 103290691 103290781 -16993531 + (GGA)n Simple_repeat Simple_repeat 3 90 0 3 1373 1379 103 111 19 chr13 103291102 103291309 -16993003 + URR1A DNA MER1_type 1 226 0 3 1373 188 34 0 33 chr13 103292044 103292074 -16992238 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1373 302 378 42 7 chr13 103292403 103292547 -16991765 + MER5A DNA MER1_type 2 150 -39 3 1373 196 407 44 0 chr13 103292553 103292666 -16991646 - L2a LINE L2 -396 3030 2913 3 1373 402 268 16 45 chr13 103292675 103292877 -16991435 - RMER4B LTR ERVK -11 574 342 3 1373 400 253 0 0 chr13 103292878 103293028 -16991284 + (CAAT)n Simple_repeat Simple_repeat 1 150 0 3 1373 668 215 112 66 chr13 103293050 103293309 -16991003 - RMER4B LTR ERVK -282 303 33 3 1373 6579 138 17 19 chr13 103293618 103294743 -16989569 + Lx LINE L1 5508 6639 -15 3 1373 197 33 0 32 chr13 103294743 103294774 -16989538 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 3 1373 6579 137 18 20 chr13 103294774 103294798 -16989514 + Lx LINE L1 6640 6654 0 3 1373 345 284 118 16 chr13 103294922 103295108 -16989204 - L2a LINE L2 -968 2451 2247 3 1373 2463 285 95 13 chr13 103295151 103295997 -16988315 + Lx8 LINE L1 6557 7471 -2 3 1373 339 25 0 0 chr13 103296156 103296196 -16988116 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 3 1373 313 235 15 0 chr13 103296211 103296279 -16988033 - RSINE1 SINE B4 -95 70 2 3 1373 513 0 0 0 chr13 103296499 103296556 -16987756 + (TTTTG)n Simple_repeat Simple_repeat 1 57 0 3 1373 246 292 41 20 chr13 103296927 103297025 -16987287 + MIR SINE MIR 83 182 -80 4 1373 21 36 0 0 chr13 103298440 103298468 -16985844 + AT_rich Low_complexity Low_complexity 1 28 0 4 1373 2726 279 89 12 chr13 103298968 103299908 -16984404 - Lx8 LINE L1 -28 7445 6433 4 1373 498 219 37 19 chr13 103299907 103300014 -16984298 + Lx8 LINE L1 6319 6427 -1046 4 1373 225 0 0 0 chr13 103300244 103300269 -16984043 + (CA)n Simple_repeat Simple_repeat 1 25 0 4 1373 548 301 70 54 chr13 103301052 103301308 -16983004 - Lx8 LINE L1 -30 7443 7178 4 1373 3686 18 2 0 chr13 103301308 103301702 -16982610 + MTA_Mm LTR MaLR 2 396 0 4 1373 548 301 70 54 chr13 103301702 103301832 -16982480 - Lx8 LINE L1 -296 7177 7051 4 1373 675 107 4 0 chr13 103301921 103302030 -16982282 - Lx LINE L1 -509 6145 6059 4 1373 271 284 39 19 chr13 103302333 103302437 -16981875 - MIR SINE MIR -93 169 64 4 1373 600 265 123 11 chr13 103304241 103304428 -16979884 - ID_B1 SINE B4 -16 208 1 4 1373 1348 192 5 0 chr13 103304778 103305002 -16979310 + URR1B DNA MER1_type 1 225 0 4 1373 2210 137 2 88 chr13 103305654 103306062 -16978250 - Lx LINE L1 0 6654 6282 4 1373 201 39 0 0 chr13 103306319 103306345 -16977967 + (T)n Simple_repeat Simple_repeat 1 26 0 4 1373 1161 69 13 40 chr13 103306458 103306609 -16977703 + B1_Mm SINE Alu 1 147 0 4 1373 559 224 143 0 chr13 103306695 103306856 -16977456 + MLT1C LTR MaLR 6 189 -278 4 1373 269 180 69 10 chr13 103308813 103308914 -16975398 + (TA)n Simple_repeat Simple_repeat 1 107 0 4 1373 21 0 0 0 chr13 103308933 103308954 -16975358 + AT_rich Low_complexity Low_complexity 1 21 0 4 1373 1072 313 81 39 chr13 103309002 103309394 -16974918 - Lx8 LINE L1 -87 7386 6974 4 1373 555 16 0 0 chr13 103309394 103309458 -16974854 + (TC)n Simple_repeat Simple_repeat 1 64 0 4 1373 1072 313 81 39 chr13 103309458 103309624 -16974688 - Lx8 LINE L1 -500 6973 6805 4 1373 1049 300 116 29 chr13 103309663 103310621 -16973691 - L1M2a LINE L1 -416 6794 5725 4 1373 216 0 0 0 chr13 103310621 103310645 -16973667 + (CTTTG)n Simple_repeat Simple_repeat 3 26 0 4 1373 1049 311 91 31 chr13 103310645 103310793 -16973519 - L1M2a LINE L1 -1437 5724 5583 4 1373 1225 99 99 5 chr13 103310796 103310998 -16973314 - URR1A DNA MER1_type -3 223 3 4 1373 370 256 40 146 chr13 103311012 103311314 -16972998 - L1M2a LINE L1 -1588 5573 5304 4 1373 545 295 18 71 chr13 103311331 103311348 -16972964 - B3A SINE B2 -2 196 183 4 1373 561 64 0 0 chr13 103311348 103311426 -16972886 + (TG)n Simple_repeat Simple_repeat 2 79 0 4 1373 574 289 9 15 chr13 103311426 103311576 -16972736 - B3 SINE B2 -16 182 38 4 1373 1855 218 58 12 chr13 103311577 103311976 -16972336 - MTD LTR MaLR -1 418 2 4 1373 248 217 0 0 chr13 103311976 103312019 -16972293 - B3A SINE B2 -155 43 1 4 1373 225 0 0 0 chr13 103312027 103312052 -16972260 + (TG)n Simple_repeat Simple_repeat 1 25 0 4 1373 580 279 16 27 chr13 103312052 103312236 -16972076 - L1M2a LINE L1 -1897 5264 5083 4 1373 588 198 56 44 chr13 103312618 103312798 -16971514 - L1MB1 LINE L1 -306 5883 5702 4 1373 2402 269 91 36 chr13 103312796 103313981 -16970331 - L1M2a LINE L1 -2085 5076 3827 4 1373 658 333 130 13 chr13 103314777 103315237 -16969075 - L1M2a LINE L1 -6644 524 11 4 1373 293 292 0 0 chr13 103315326 103315391 -16968921 + MER5A1 DNA MER1_type 13 77 -89 4 1373 270 188 10 20 chr13 103315391 103315489 -16968823 + (CA)n Simple_repeat Simple_repeat 2 98 0 4 1373 448 179 21 25 chr13 103315501 103315748 -16968564 + (CA)n Simple_repeat Simple_repeat 1 245 0 4 1373 266 149 64 0 chr13 103315748 103315795 -16968517 + MER5A1 DNA MER1_type 83 132 -34 4 1373 731 315 94 21 chr13 103317377 103317760 -16966552 + L2a LINE L2 3015 3425 -1 4 1373 448 251 132 100 chr13 103317870 103318060 -16966252 + B3A SINE B2 3 198 0 4 1373 1296 243 49 40 chr13 103318106 103318454 -16965858 - ORR1D2 LTR MaLR -13 357 7 4 1373 234 340 0 0 chr13 103318567 103318670 -16965642 + L1MB1 LINE L1 6052 6154 -35 4 1373 424 278 15 29 chr13 103318706 103318843 -16965469 + L1MA10 LINE L1 6192 6326 -8 4 1373 306 50 0 0 chr13 103319310 103319350 -16964962 + (ATTG)n Simple_repeat Simple_repeat 4 43 0 4 1373 396 287 7 111 chr13 103319351 103319504 -16964808 - B1F1 SINE Alu -10 139 3 4 1373 621 346 32 0 chr13 103319572 103319731 -16964581 + B3A SINE B2 1 165 -33 4 1373 384 103 0 0 chr13 103319731 103319789 -16964523 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1373 621 346 32 0 chr13 103319789 103319814 -16964498 + B3A SINE B2 166 190 -8 4 1373 462 268 131 17 chr13 103320348 103320523 -16963789 - MER115 DNA Tip100 0 693 499 4 1373 1186 220 22 4 chr13 103320616 103320844 -16963468 + MTD LTR MaLR 1 232 -187 4 1373 228 197 28 0 chr13 103320851 103320922 -16963390 + (TA)n Simple_repeat Simple_repeat 2 74 0 4 1373 267 312 123 12 chr13 103321023 103321104 -16963208 + ID_B1 SINE B4 3 92 -132 4 1373 633 129 28 21 chr13 103321173 103321315 -16962997 + C-rich Low_complexity Low_complexity 4 146 0 4 1373 314 268 82 58 chr13 103321315 103321608 -16962704 + RMER17C LTR ERVK 80 379 -31 4 1373 244 250 181 0 chr13 103321607 103321679 -16962633 + ID_B1 SINE B4 97 181 -43 4 1373 737 293 88 9 chr13 103322376 103322693 -16961619 - L1MD3 LINE L1 -2 7993 7652 4 1373 863 283 56 68 chr13 103322714 103322848 -16961464 + L1MA8 LINE L1 4985 5124 -1019 4 1373 396 59 0 0 chr13 103322848 103322899 -16961413 + (CA)n Simple_repeat Simple_repeat 2 52 0 4 1373 1052 254 136 35 chr13 103322899 103323377 -16960935 + L1MA8 LINE L1 5125 5649 -642 4 1373 232 305 83 24 chr13 103323652 103323736 -16960576 - ORR1E LTR MaLR -249 110 22 4 1373 1053 309 29 68 chr13 103323761 103324351 -16959961 + L1MA8 LINE L1 5650 6216 -75 4 1373 1254 55 0 7 chr13 103324433 103324567 -16959745 + B1_Mus1 SINE Alu 2 135 -13 4 1373 195 42 0 0 chr13 103324567 103324591 -16959721 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 4 1373 1254 55 0 7 chr13 103324591 103324604 -16959708 + B1_Mus1 SINE Alu 136 148 0 4 1373 2222 243 89 38 chr13 103324609 103325182 -16959130 - Lx6 LINE L1 -18 7442 6841 4 1373 714 119 0 0 chr13 103325207 103325341 -16958971 + (TC)n Simple_repeat Simple_repeat 1 134 0 4 1373 652 233 8 0 chr13 103325349 103325478 -16958834 - Lx6 LINE L1 -574 6886 6757 4 1373 387 0 0 0 chr13 103325573 103325616 -16958696 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1373 1717 187 115 0 chr13 103325618 103325949 -16958363 - MTC LTR MaLR -52 369 1 4 1373 486 159 45 11 chr13 103325988 103326077 -16958235 + Lx6 LINE L1 6239 6330 -1130 4 1373 3285 214 77 14 chr13 103326073 103326686 -16957626 + Lx9 LINE L1 6409 7426 -218 4 1373 276 30 0 0 chr13 103326686 103326719 -16957593 + (TG)n Simple_repeat Simple_repeat 1 33 0 4 1373 3285 208 84 7 chr13 103326719 103326905 -16957407 + Lx9 LINE L1 7427 7641 -3 4 1373 28776 112 11 3 chr13 103327211 103332281 -16952031 - L1_Mus3 LINE L1 0 6638 1539 4 1373 452 236 54 34 chr13 103332252 103332401 -16951911 - L1_Mus3 LINE L1 -5790 826 675 4 1373 237 337 22 0 chr13 103332778 103332867 -16951445 + MLT2B2 LTR ERVL 1 91 -424 4 1373 495 0 0 0 chr13 103333610 103333665 -16950647 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 4 1373 998 289 38 35 chr13 103333669 103334010 -16950302 + MTEa LTR MaLR 31 372 -7 4 1373 217 300 0 0 chr13 103334010 103334070 -16950242 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 1373 4231 119 42 9 chr13 103334103 103334788 -16949524 - L1_Mur2 LINE L1 -709 5168 4461 4 1373 3028 216 98 9 chr13 103334795 103335124 -16949188 + Lx2B LINE L1 6197 6538 -462 4 1373 402 21 0 0 chr13 103335124 103335171 -16949141 + (CAAAA)n Simple_repeat Simple_repeat 5 51 0 4 1373 3028 216 98 9 chr13 103335171 103335574 -16948738 + Lx2B LINE L1 6539 6993 -7 4 1373 662 311 18 14 chr13 103337660 103337882 -16946430 + B4A SINE B4 2 224 -68 4 1373 234 132 0 0 chr13 103337887 103337925 -16946387 + Lx7 LINE L1 7317 7354 -342 4 1373 252 111 0 0 chr13 103337928 103337973 -16946339 + (TTTC)n Simple_repeat Simple_repeat 1 45 0 4 1373 863 199 127 63 chr13 103337973 103338289 -16946023 + Lx7 LINE L1 7357 7692 -4 4 1373 227 316 13 26 chr13 103338295 103338373 -16945939 + B4A SINE B4 216 292 0 4 1373 390 21 0 0 chr13 103338391 103338438 -16945874 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1373 612 203 3 10 chr13 103338745 103339066 -16945246 + (CA)n Simple_repeat Simple_repeat 1 318 0 4 1373 582 179 8 17 chr13 103341073 103341192 -16943120 + B1_Mur4 SINE Alu 27 144 -6 4 1373 1019 144 0 11 chr13 103341205 103341387 -16942925 + GA-rich Low_complexity Low_complexity 1 180 0 4 1373 180 111 0 0 chr13 103341875 103341902 -16942410 + (TC)n Simple_repeat Simple_repeat 2 28 0 4 1373 3826 76 8 8 chr13 103344492 103345009 -16939303 - L1_Mus3 LINE L1 -4 6634 6118 4 1373 3990 61 20 0 chr13 103345013 103345520 -16938792 + L1_Mus3 LINE L1 5588 6104 -534 4 1373 951 103 156 12 chr13 103345919 103346086 -16938226 - B2_Mm2 SINE B2 -4 191 1 4 1373 267 300 32 2 chr13 103346231 103346339 -16937973 - MLT1J1 LTR MaLR -292 152 43 4 1373 276 149 0 0 chr13 103348639 103348686 -16935626 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 1373 1128 115 0 0 chr13 103351000 103351235 -16933077 + (TG)n Simple_repeat Simple_repeat 1 235 0 4 1373 231 242 32 0 chr13 103351236 103351298 -16933014 + (CATATA)n Simple_repeat Simple_repeat 5 68 0 4 1373 180 0 0 0 chr13 103352905 103352925 -16931387 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1373 324 304 17 17 chr13 103354363 103354480 -16929832 + MIR SINE MIR 12 128 -134 4 1373 1118 75 6 0 chr13 103355089 103355248 -16929064 + B2_Mm1a SINE B2 1 160 -33 4 1373 279 0 0 0 chr13 103355248 103355279 -16929033 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 4 1373 586 226 70 102 chr13 103355279 103355306 -16929006 + B3A SINE B2 166 181 -17 4 1373 207 250 56 22 chr13 103355772 103355862 -16928450 - L2 LINE L2 -963 2456 2364 4 1373 308 94 19 0 chr13 103356188 103356241 -16928071 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 4 1373 666 37 0 0 chr13 103356760 103356841 -16927471 + (CCA)n Simple_repeat Simple_repeat 3 83 0 4 1373 297 189 39 69 chr13 103357145 103357247 -16927065 + MLT1J LTR MaLR 360 458 -54 4 1373 198 128 0 0 chr13 103358265 103358304 -16926008 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1373 236 77 26 0 chr13 103358417 103358456 -16925856 + (GA)n Simple_repeat Simple_repeat 2 41 0 4 1373 234 264 0 36 chr13 103358888 103358943 -16925369 + G-rich Low_complexity Low_complexity 2 54 0 4 1373 218 277 15 0 chr13 103359522 103359587 -16924725 + MIR SINE MIR 74 139 -123 4 1373 219 328 0 0 chr13 103360766 103360824 -16923488 + G-rich Low_complexity Low_complexity 4 61 0 4 1373 662 266 14 7 chr13 103361689 103361833 -16922479 + RSINE1 SINE B4 10 154 -11 4 1373 220 204 0 0 chr13 103361842 103361886 -16922426 + (CA)n Simple_repeat Simple_repeat 1 44 0 4 1373 276 133 0 0 chr13 103362427 103362487 -16921825 + (TCC)n Simple_repeat Simple_repeat 2 61 0 4 1373 528 16 0 0 chr13 103362619 103362680 -16921632 + (TC)n Simple_repeat Simple_repeat 2 62 0 4 1373 351 0 0 0 chr13 103362680 103362718 -16921594 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1373 629 200 28 121 chr13 103362720 103363010 -16921302 + RMER17C LTR ERVK 116 378 -32 4 1373 809 306 26 15 chr13 103364428 103364693 -16919619 - B4A SINE B4 -24 268 1 4 1373 1045 251 131 38 chr13 103364975 103365427 -16918885 + L1MB3 LINE L1 5688 6181 -2 5 1373 306 106 0 0 chr13 103365453 103365500 -16918812 + (GGA)n Simple_repeat Simple_repeat 3 49 0 5 1373 21 0 0 0 chr13 103366828 103366849 -16917463 + AT_rich Low_complexity Low_complexity 1 21 0 5 1373 249 33 0 0 chr13 103367351 103367381 -16916931 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 5 1373 488 93 13 0 chr13 103367996 103368071 -16916241 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 5 1373 375 272 46 26 chr13 103368793 103368944 -16915368 + MER58B DNA MER1_type 46 199 -142 5 1373 293 243 31 133 chr13 103369075 103369203 -16915109 + PB1D10 SINE Alu 3 117 0 5 1373 911 174 0 6 chr13 103369300 103369479 -16914833 + GA-rich Low_complexity Low_complexity 3 180 0 5 1373 360 0 0 0 chr13 103369479 103369519 -16914793 + (GAAA)n Simple_repeat Simple_repeat 1 40 0 5 1373 1063 78 0 13 chr13 103370574 103370729 -16913583 + B2_Mm2 SINE B2 1 153 -42 5 1373 333 0 0 0 chr13 103370729 103370766 -16913546 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 5 1373 4235 74 13 0 chr13 103371169 103371710 -16912602 - L1_Mus1 LINE L1 0 6567 6020 5 1373 3916 50 0 0 chr13 103371710 103372305 -16912007 + L1Md_F2 LINE L1 5449 6043 -539 5 1373 2082 153 72 19 chr13 103372681 103373055 -16911257 - ORR1B1 LTR MaLR 0 394 1 5 1373 288 77 0 0 chr13 103373271 103373310 -16911002 + (GA)n Simple_repeat Simple_repeat 2 40 0 5 1373 496 290 132 46 chr13 103373485 103374078 -16910234 + L1MD LINE L1 3689 4313 -1833 5 1373 399 307 47 22 chr13 103374093 103374312 -16910000 + L1M5 LINE L1 4436 4662 -1484 5 1373 360 0 0 0 chr13 103375766 103375806 -16908506 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 5 1373 994 111 0 0 chr13 103375806 103375941 -16908371 - B1_Mus2 SINE Alu -9 138 4 5 1373 4561 6 2 0 chr13 103376929 103377421 -16906891 + MT2_Mm LTR ERVL 1 493 0 5 1373 48506 19 0 0 chr13 103377421 103382779 -16901533 + MERVL-int LTR ERVL 1 5360 -125 5 1373 362 167 46 35 chr13 103382779 103382866 -16901446 + ORR1A3-int LTR MaLR 553 640 -1323 5 1373 321 0 0 0 chr13 103382866 103382904 -16901408 + MERVL-int LTR ERVL 5448 5485 0 5 1373 4561 6 2 0 chr13 103382904 103383396 -16900916 + MT2_Mm LTR ERVL 1 493 0 5 1373 264 200 0 0 chr13 103383557 103383612 -16900700 + GA-rich Low_complexity Low_complexity 4 58 0 5 1373 243 285 95 44 chr13 103383612 103383770 -16900542 + L1M5 LINE L1 4665 4830 -1316 5 1373 309 288 84 65 chr13 103383865 103384140 -16900172 + L1ME2 LINE L1 5769 6048 -116 5 1373 4414 22 2 0 chr13 103384259 103384751 -16899561 - MT2_Mm LTR ERVL 0 493 1 5 1373 321 0 0 0 chr13 103384751 103384789 -16899523 - MERVL-int LTR ERVL 0 5485 5448 5 1373 362 167 46 35 chr13 103384789 103384876 -16899436 - ORR1A3-int LTR MaLR -1323 640 553 5 1373 7279 28 1 0 chr13 103384876 103385702 -16898610 - MERVL-int LTR ERVL -125 5360 4534 5 1373 41306 11 7 0 chr13 103405825 103410331 -16873981 - MERVL-int LTR ERVL -946 4539 1 5 1373 4414 22 2 0 chr13 103410331 103410823 -16873489 - MT2_Mm LTR ERVL 0 493 1 5 1373 372 153 42 8 chr13 103410833 103410952 -16873360 + (TA)n Simple_repeat Simple_repeat 2 124 0 5 1373 297 337 43 0 chr13 103412459 103412551 -16871761 - MER81 DNA AcHobo -1 113 18 5 1373 423 331 50 61 chr13 103412700 103412987 -16871325 - MLT1F2 LTR MaLR -68 586 298 5 1373 2110 115 12 0 chr13 103413331 103413654 -16870658 + ORR1A2 LTR MaLR 1 327 0 5 1373 378 284 78 91 chr13 103413667 103413733 -16870579 + LTR87 LTR ERVL? 376 427 -197 5 1373 952 234 9 5 chr13 103413733 103413948 -16870364 - B3 SINE B2 0 216 1 5 1373 378 284 78 91 chr13 103413948 103414113 -16870199 + LTR87 LTR ERVL? 428 604 -20 5 1373 200 91 44 22 chr13 103414315 103414360 -16869952 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 1373 261 0 0 0 chr13 103415054 103415083 -16869229 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 5 1374 3818 27 2 5 chr13 103417221 103417689 -16866623 + L1Md_F3 LINE L1 6133 6584 0 5 1374 203 0 0 36 chr13 103418878 103418906 -16865406 + (TAAAAA)n Simple_repeat Simple_repeat 4 30 0 5 1374 669 165 0 0 chr13 103421544 103421665 -16862647 + GA-rich Low_complexity Low_complexity 2 122 0 5 1374 210 171 0 0 chr13 103421693 103421734 -16862578 + G-rich Low_complexity Low_complexity 2 42 0 5 1374 1137 128 0 0 chr13 103421734 103421914 -16862398 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 5 1374 439 276 134 84 chr13 103421918 103422120 -16862192 + B4 SINE B4 81 292 0 5 1374 308 233 0 23 chr13 103422267 103422355 -16861957 - PB1D10 SINE Alu -30 87 2 5 1374 216 0 0 0 chr13 103422865 103422889 -16861423 + (CA)n Simple_repeat Simple_repeat 2 25 0 5 1374 182 383 121 15 chr13 103423876 103424075 -16860237 + MIRb SINE MIR 43 262 -6 5 1374 860 297 29 26 chr13 103424208 103424467 -16859845 + B4A SINE B4 5 266 -26 5 1374 240 35 0 0 chr13 103424467 103424496 -16859816 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1374 860 297 29 26 chr13 103424496 103424509 -16859803 + B4A SINE B4 267 278 -14 5 1374 1049 164 92 0 chr13 103424514 103424721 -16859591 - URR1A DNA MER1_type 0 226 1 5 1374 512 309 97 28 chr13 103424746 103424962 -16859350 + MTD LTR MaLR 19 249 -170 5 1374 190 254 51 0 chr13 103425970 103426029 -16858283 + MIRm SINE MIR 93 154 -122 5 1374 2084 123 3 63 chr13 103428250 103428597 -16855715 + ORR1A3 LTR MaLR 1 326 0 5 1374 22 70 0 0 chr13 103428632 103428675 -16855637 + AT_rich Low_complexity Low_complexity 1 43 0 5 1374 693 122 0 0 chr13 103428782 103428889 -16855423 + B2_Mm2 SINE B2 1 107 -88 5 1374 198 0 0 0 chr13 103428892 103428914 -16855398 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1374 309 219 0 0 chr13 103429116 103429189 -16855123 + (TA)n Simple_repeat Simple_repeat 2 74 0 5 1374 1197 62 0 0 chr13 103430112 103430258 -16854054 + B1_Mm SINE Alu 1 146 -1 5 1374 696 12 0 0 chr13 103430258 103430339 -16853973 + (GA)n Simple_repeat Simple_repeat 2 82 0 5 1374 369 0 0 0 chr13 103430623 103430664 -16853648 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 1374 390 21 0 0 chr13 103430664 103430710 -16853602 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1374 198 71 0 0 chr13 103431267 103431295 -16853017 + (TTG)n Simple_repeat Simple_repeat 1 28 0 5 1374 406 275 0 0 chr13 103432596 103432687 -16851625 + PB1D10 SINE Alu 1 91 -26 5 1374 453 250 0 0 chr13 103432782 103432870 -16851442 - PB1D7 SINE Alu -7 113 26 5 1374 555 16 0 0 chr13 103433271 103433335 -16850977 + (TC)n Simple_repeat Simple_repeat 1 64 0 5 1374 279 0 0 0 chr13 103433335 103433365 -16850947 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1374 280 242 16 0 chr13 103433833 103433895 -16850417 + tRNA-Ala-GCY_ tRNA tRNA 3 65 -10 5 1374 212 364 76 8 chr13 103433899 103434018 -16850294 + PB1 SINE Alu 1 127 0 5 1374 240 35 0 0 chr13 103434031 103434060 -16850252 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1374 284 100 50 0 chr13 103435681 103435741 -16848571 + (TTTTG)n Simple_repeat Simple_repeat 2 64 0 5 1374 252 0 0 0 chr13 103437303 103437331 -16846981 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1374 605 296 10 26 chr13 103437483 103437677 -16846635 + B3A SINE B2 8 198 0 5 1374 290 303 121 59 chr13 103438133 103438389 -16845923 - LTR16E1 LTR ERVL -4 534 263 5 1374 1069 114 10 102 chr13 103438846 103439051 -16845261 + B2_Mm2 SINE B2 1 186 -9 5 1374 25 0 0 0 chr13 103439152 103439177 -16845135 + AT_rich Low_complexity Low_complexity 1 25 0 5 1374 708 68 0 0 chr13 103439456 103439559 -16844753 + (TG)n Simple_repeat Simple_repeat 1 103 0 5 1374 309 51 0 0 chr13 103439559 103439598 -16844714 + (GTATG)n Simple_repeat Simple_repeat 2 40 0 5 1374 829 283 7 37 chr13 103439623 103439917 -16844395 - B4A SINE B4 -6 286 2 5 1374 559 262 151 0 chr13 103440715 103440887 -16843425 + B3 SINE B2 1 198 -18 5 1374 829 269 67 22 chr13 103440931 103441246 -16843066 - L1M2 LINE L1 -676 5624 5296 5 1374 356 276 119 34 chr13 103441267 103441503 -16842809 - Charlie4a DNA MER1_type -118 390 135 5 1374 21 0 0 0 chr13 103441591 103441612 -16842700 + AT_rich Low_complexity Low_complexity 1 21 0 5 1374 194 288 23 133 chr13 103442018 103442146 -16842166 + MIR SINE MIR 83 196 -66 5 1374 269 318 115 0 chr13 103442221 103442369 -16841943 + MER112 DNA MER1_type 18 182 -79 5 1374 222 308 38 19 chr13 103442630 103442736 -16841576 - L2a LINE L2 -41 3385 3278 5 1374 636 289 10 24 chr13 103442768 103442997 -16841315 + B3A SINE B2 2 216 0 5 1374 369 43 0 0 chr13 103443734 103443781 -16840531 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1374 1220 48 7 0 chr13 103443948 103444095 -16840217 + B1_Mus1 SINE Alu 1 148 0 5 1374 3049 48 26 48 chr13 103444876 103445292 -16839020 + MTB_Mm LTR MaLR 1 407 0 5 1374 199 311 86 50 chr13 103445949 103446088 -16838224 - MIR SINE MIR -20 242 99 5 1374 556 209 85 59 chr13 103446250 103446544 -16837768 - MTD LTR MaLR -14 405 46 5 1374 492 100 0 0 chr13 103447656 103447736 -16836576 + (TTC)n Simple_repeat Simple_repeat 3 82 0 5 1374 237 98 0 0 chr13 103447739 103447780 -16836532 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 5 1374 223 203 17 17 chr13 103447811 103447871 -16836441 + GA-rich Low_complexity Low_complexity 2 61 0 5 1374 636 230 0 0 chr13 103449399 103449560 -16834752 + (TG)n Simple_repeat Simple_repeat 1 161 0 5 1374 366 231 0 0 chr13 103449578 103449669 -16834643 + (TG)n Simple_repeat Simple_repeat 2 92 0 5 1374 571 286 6 36 chr13 103449670 103449837 -16834475 - RSINE1 SINE B4 0 165 4 5 1374 297 252 55 157 chr13 103450739 103451172 -16833140 + L1M5 LINE L1 3223 3611 -2535 5 1374 495 96 0 0 chr13 103451305 103451388 -16832924 + (TG)n Simple_repeat Simple_repeat 1 83 0 5 1374 481 239 40 165 chr13 103451389 103451436 -16832876 - MTE2b LTR MaLR -6 373 337 5 1374 949 216 88 0 chr13 103451436 103451630 -16832682 + B3 SINE B2 1 211 -5 5 1374 496 239 40 165 chr13 103451630 103451782 -16832530 - MTE2b LTR MaLR -39 340 199 5 1374 858 283 21 13 chr13 103451780 103452016 -16832296 - MTE2b LTR MaLR -141 238 1 5 1374 714 309 45 7 chr13 103452016 103452306 -16832006 + L1M5 LINE L1 3791 4091 -2055 5 1374 254 295 74 0 chr13 103452488 103452583 -16831729 - Lx8 LINE L1 -137 7336 7235 5 1374 278 105 0 0 chr13 103452584 103452622 -16831690 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 5 1374 757 170 29 0 chr13 103452622 103452793 -16831519 + GA-rich Low_complexity Low_complexity 2 177 0 5 1374 703 243 10 70 chr13 103452794 103452993 -16831319 - Lx8 LINE L1 -235 7238 7052 5 1374 257 137 39 0 chr13 103454078 103454129 -16830183 + (CACG)n Simple_repeat Simple_repeat 1 53 0 5 1374 1238 41 0 0 chr13 103454730 103454877 -16829435 + B1_Mus1 SINE Alu 2 148 0 6 1374 238 77 57 19 chr13 103454877 103454930 -16829382 + A-rich Low_complexity Low_complexity 5 59 0 6 1374 488 253 83 90 chr13 103455330 103455608 -16828704 - B4A SINE B4 -16 276 1 6 1374 645 253 14 63 chr13 103456337 103456544 -16827768 - RMER30 DNA MER1_type -5 197 1 6 1374 1162 61 0 13 chr13 103456768 103456917 -16827395 + B1_Mm SINE Alu 1 147 0 6 1374 287 257 27 0 chr13 103457026 103457100 -16827212 + C-rich Low_complexity Low_complexity 2 77 0 6 1374 932 279 21 39 chr13 103457288 103457568 -16826744 + B4A SINE B4 15 289 -3 6 1374 3566 155 45 3 chr13 103457585 103458227 -16826085 + RLTR17 LTR ERVK 1 669 -23 6 1374 336 298 56 79 chr13 103458231 103458446 -16825866 + RLTR31_Mm LTR ERVK 351 560 -1 6 1374 186 103 0 0 chr13 103458657 103458686 -16825626 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 6 1374 54 40 0 0 chr13 103458738 103458813 -16825499 + AT_rich Low_complexity Low_complexity 1 75 0 6 1374 223 270 0 0 chr13 103458922 103458985 -16825327 + MIR SINE MIR 189 251 -11 6 1374 335 121 17 0 chr13 103461062 103461120 -16823192 + (TCCC)n Simple_repeat Simple_repeat 3 61 0 6 1374 661 76 19 0 chr13 103461877 103461982 -16822330 + (TC)n Simple_repeat Simple_repeat 2 108 0 6 1374 206 146 0 47 chr13 103462052 103462095 -16822217 - L2a LINE L2 -18 3408 3368 6 1374 319 316 52 13 chr13 103462382 103462536 -16821776 + MLT1D LTR MaLR 7 166 -339 6 1374 255 382 0 0 chr13 103462568 103462670 -16821642 + PB1D10 SINE Alu 6 107 -10 6 1374 3433 78 0 8 chr13 103462795 103463286 -16821026 - RLTR1C LTR ERV1 -16 487 1 6 1374 234 244 51 0 chr13 103463296 103463374 -16820938 + MLT2B4 LTR ERVL 3 84 -472 6 1374 474 18 0 0 chr13 103463518 103463573 -16820739 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1374 438 69 0 0 chr13 103463765 103463823 -16820489 + (TGGA)n Simple_repeat Simple_repeat 3 60 0 6 1374 1121 58 23 17 chr13 103463835 103464010 -16820302 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 6 1374 342 359 78 0 chr13 103464094 103464261 -16820051 + MLT1D LTR MaLR 324 503 -2 6 1374 423 0 0 0 chr13 103464828 103464875 -16819437 + (TC)n Simple_repeat Simple_repeat 1 47 0 6 1374 1471 101 18 0 chr13 103465239 103465458 -16818854 + ORR1A1 LTR MaLR 124 346 0 6 1374 13960 63 7 1 chr13 103465458 103467239 -16817073 + ORR1A1-int LTR MaLR 1 1792 0 6 1374 1870 89 101 8 chr13 103467239 103467553 -16816759 + ORR1A1 LTR MaLR 1 358 -12 6 1374 478 259 26 31 chr13 103467619 103467776 -16816536 - MTE2b LTR MaLR -56 323 147 6 1374 198 0 0 0 chr13 103467801 103467823 -16816489 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1374 296 311 7 22 chr13 103467981 103468116 -16816196 + Charlie21a DNA MER1_type 378 510 -703 6 1374 1368 97 16 0 chr13 103468116 103468302 -16816010 + B2_Mm2 SINE B2 2 190 -5 6 1374 2581 69 38 19 chr13 103469814 103470185 -16814127 - Lx LINE L1 -1 6653 6276 6 1374 399 92 0 0 chr13 103470208 103470273 -16814039 + (GA)n Simple_repeat Simple_repeat 2 66 0 6 1374 531 0 0 0 chr13 103470685 103470744 -16813568 + (TC)n Simple_repeat Simple_repeat 2 60 0 6 1374 369 62 0 0 chr13 103471027 103471075 -16813237 + (TA)n Simple_repeat Simple_repeat 1 48 0 6 1374 297 0 0 0 chr13 103471075 103471107 -16813205 + (GA)n Simple_repeat Simple_repeat 2 34 0 6 1374 2782 289 44 55 chr13 103471112 103472121 -16812191 + Lx8 LINE L1 6200 7196 -277 6 1374 997 67 0 0 chr13 103472440 103472574 -16811738 + B2_Mm2 SINE B2 2 135 -60 6 1374 468 0 0 0 chr13 103473048 103473100 -16811212 + (CA)n Simple_repeat Simple_repeat 2 53 0 6 1374 517 288 45 7 chr13 103473474 103473628 -16810684 + B3A SINE B2 2 161 -37 6 1374 1204 68 0 0 chr13 103473756 103473904 -16810408 + B1_Mus1 SINE Alu 1 148 0 6 1374 1062 102 65 54 chr13 103474418 103474604 -16809708 - B2_Mm2 SINE B2 -7 188 1 6 1374 304 136 17 0 chr13 103476175 103476234 -16808078 + ORR1B2 LTR MaLR 3 62 -305 6 1374 273 116 0 0 chr13 103476236 103476279 -16808033 + RLTR15 LTR ERVK 3 45 -314 6 1374 2314 116 45 66 chr13 103476290 103476715 -16807597 - RLTR23 LTR ERV1 0 430 15 6 1374 962 208 49 19 chr13 103476720 103476985 -16807327 + RLTR15 LTR ERVK 51 323 -36 6 1374 1582 153 19 63 chr13 103477000 103477267 -16807045 + ORR1B2 LTR MaLR 59 328 -39 6 1374 5280 39 8 5 chr13 103477267 103477906 -16806406 + L1Md_F3 LINE L1 5944 6584 0 6 1374 1582 153 19 63 chr13 103477906 103477953 -16806359 + ORR1B2 LTR MaLR 329 359 -8 6 1374 275 305 114 12 chr13 103478544 103478710 -16805602 + MER34A LTR ERV1 12 194 -348 6 1374 382 284 18 110 chr13 103478744 103478962 -16805350 + MER34A LTR ERV1 258 455 -116 6 1374 2859 178 4 15 chr13 103479137 103479667 -16804645 - RLTR28 LTR ERVL 0 524 1 6 1374 1331 161 4 30 chr13 103480236 103480467 -16803845 - URR1B DNA MER1_type 0 225 1 6 1374 572 194 8 39 chr13 103481035 103481164 -16803148 + RSINE1 SINE B4 5 129 -36 6 1374 253 328 112 67 chr13 103481379 103481647 -16802665 + L3 LINE CR1 4104 4383 -106 6 1374 386 347 62 10 chr13 103482178 103482370 -16801942 - MIRc SINE MIR -13 255 54 6 1374 592 281 69 21 chr13 103482799 103482988 -16801324 - ID_B1 SINE B4 -13 211 14 6 1374 228 67 0 0 chr13 103483581 103483611 -16800701 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1374 806 261 84 66 chr13 103484670 103485051 -16799261 - MLT1B LTR MaLR 0 390 3 6 1374 425 349 117 36 chr13 103485930 103486440 -16797872 - L1ME3 LINE L1 -3 6159 5615 6 1374 441 0 0 0 chr13 103486440 103486489 -16797823 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1374 425 349 117 36 chr13 103486489 103486653 -16797659 - L1ME3 LINE L1 -548 5614 5431 6 1374 543 271 200 0 chr13 103486810 103487090 -16797222 - L1ME3 LINE L1 -795 5351 5016 6 1374 190 284 14 56 chr13 103487634 103487705 -16796607 - MIRb SINE MIR -81 187 120 6 1374 1149 131 57 74 chr13 103487759 103487825 -16796487 - URR1A DNA MER1_type 0 226 164 6 1374 3042 20 3 9 chr13 103487825 103488173 -16796139 + ORR1A0 LTR MaLR 1 346 0 6 1374 1149 131 57 74 chr13 103488173 103488336 -16795976 - URR1A DNA MER1_type -63 163 1 6 1374 205 163 0 44 chr13 103488435 103488480 -16795832 + T-rich Low_complexity Low_complexity 4 46 0 6 1374 369 0 0 0 chr13 103489307 103489348 -16794964 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1374 251 237 17 0 chr13 103489482 103489541 -16794771 + GA-rich Low_complexity Low_complexity 5 64 0 6 1374 180 0 0 0 chr13 103489745 103489765 -16794547 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 6 1374 393 206 54 11 chr13 103491273 103491366 -16792946 - PB1D7 SINE Alu -1 119 23 6 1374 555 281 25 56 chr13 103491741 103491903 -16792409 - RSINE1 SINE B4 -7 158 2 6 1374 209 255 39 0 chr13 103491924 103491975 -16792337 + CT-rich Low_complexity Low_complexity 1 53 0 6 1374 299 237 143 10 chr13 103492337 103492435 -16791877 - PB1D10 SINE Alu -6 111 1 6 1374 259 264 57 24 chr13 103492603 103492727 -16791585 - L1MC LINE L1 -2169 5713 5586 6 1374 1335 134 41 5 chr13 103493186 103493404 -16790908 + URR1A DNA MER1_type 1 226 0 6 1374 760 218 13 13 chr13 103493543 103493692 -16790620 - B1_Mur3 SINE Alu 0 149 1 6 1374 329 236 0 122 chr13 103494267 103494349 -16789963 + ID4_ SINE ID 12 83 0 6 1374 359 262 19 0 chr13 103496802 103496909 -16787403 + C-rich Low_complexity Low_complexity 4 112 0 6 1374 240 86 0 0 chr13 103497062 103497097 -16787215 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1374 216 0 0 0 chr13 103497101 103497125 -16787187 + (CCAA)n Simple_repeat Simple_repeat 4 27 0 6 1374 618 299 134 21 chr13 103497771 103498055 -16786257 + MER2 DNA MER2_type 26 341 -4 6 1374 288 273 45 89 chr13 103498552 103498709 -16785603 - B4 SINE B4 -141 151 2 6 1374 1307 199 129 3 chr13 103499175 103499493 -16784819 + ORR1B2 LTR MaLR 1 358 -9 6 1374 218 357 50 20 chr13 103501081 103501181 -16783131 - PB1D10 SINE Alu -14 103 1 1 1374 380 283 29 29 chr13 103501365 103501467 -16782845 + B3A SINE B2 59 160 -38 2 1374 405 0 0 0 chr13 103501474 103501519 -16782793 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1374 240 333 157 10 chr13 103501678 103501875 -16782437 + L1M5 LINE L1 5635 5860 -334 4 1374 1224 234 110 16 chr13 103501899 103502267 -16782045 - MER57C2 LTR ERV1 -12 422 35 5 1374 407 113 14 0 chr13 103502488 103502559 -16781753 + (TCCC)n Simple_repeat Simple_repeat 1 72 0 6 1374 786 291 71 64 chr13 103502713 103502996 -16781316 - MTEb LTR MaLR -12 367 83 7 1374 295 179 0 37 chr13 103503051 103503091 -16781221 + polypurine Low_complexity Low_complexity 2 39 0 8 1374 1180 56 0 0 chr13 103503091 103503234 -16781078 + B1_Mm SINE Alu 5 147 0 9 1374 295 179 0 37 chr13 103503234 103503256 -16781056 + polypurine Low_complexity Low_complexity 40 61 0 1 1374 563 40 0 13 chr13 103503256 103503331 -16780981 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 1 1374 295 179 0 37 chr13 103503331 103503348 -16780964 + polypurine Low_complexity Low_complexity 62 78 0 1 1374 325 327 62 18 chr13 103503667 103503779 -16780533 - RLTR21 LTR ERVK -1247 325 209 1 1374 206 0 0 65 chr13 103504342 103504373 -16779939 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1374 1029 44 74 0 chr13 103504381 103504516 -16779796 - B1_Mus1 SINE Alu -2 146 2 1 1374 468 216 26 172 chr13 103504623 103504704 -16779608 - Lx8 LINE L1 -171 7302 7246 1 1374 3341 56 2 0 chr13 103504704 103505099 -16779213 + MTA_Mm LTR MaLR 1 396 0 1 1374 468 216 26 172 chr13 103505099 103505168 -16779144 - Lx8 LINE L1 -228 7245 7174 1 1374 1529 119 6 5 chr13 103505741 103505972 -16778340 + Lx2 LINE L1 6184 6407 -651 1 1374 2472 97 45 3 chr13 103505962 103506314 -16777998 + Lx2 LINE L1 6542 6908 -89 1 1374 210 314 0 28 chr13 103506693 103506765 -16777547 - ID4 SINE ID -12 71 2 1 1374 1298 184 4 18 chr13 103507471 103507698 -16776614 + URR1A DNA MER1_type 3 226 0 2 1374 308 312 84 18 chr13 103508662 103508887 -16775425 - L1M2 LINE L1 -3185 2958 2719 2 1374 2277 305 105 52 chr13 103508898 103509476 -16774836 - Lx8 LINE L1 0 7473 6878 2 1374 225 0 0 0 chr13 103509476 103509501 -16774811 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2 1374 2277 305 105 52 chr13 103509501 103510079 -16774233 - Lx8 LINE L1 -596 6877 6255 2 1374 6544 125 52 24 chr13 103510058 103510427 -16773885 - Lx2 LINE L1 -299 6698 6301 2 1374 209 0 98 0 chr13 103510427 103510468 -16773844 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1374 16053 139 23 28 chr13 103510468 103513703 -16770609 - Lx2 LINE L1 -697 6300 3102 2 1374 390 211 168 53 chr13 103513703 103513798 -16770514 + B3A SINE B2 16 121 -77 2 1374 562 239 17 112 chr13 103513805 103513984 -16770328 + B3A SINE B2 30 191 -7 2 1374 518 296 84 15 chr13 103514415 103514617 -16769695 + B3 SINE B2 1 216 0 2 1374 2242 207 60 6 chr13 103514706 103515241 -16769071 - RLTR12A LTR ERVK -4 564 1 2 1374 486 0 0 0 chr13 103515400 103515454 -16768858 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1374 440 291 39 60 chr13 103515553 103515787 -16768525 + MER57A-int LTR ERV1 3481 3709 -2478 3 1374 414 0 0 0 chr13 103517108 103517154 -16767158 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1374 180 0 0 0 chr13 103518051 103518071 -16766241 + (TAA)n Simple_repeat Simple_repeat 2 21 0 3 1374 918 195 66 15 chr13 103518105 103518303 -16766009 - B3 SINE B2 -8 208 1 3 1374 4717 62 3 7 chr13 103519116 103519705 -16764607 - LTRIS_Mus LTR ERV1 0 587 1 3 1374 742 218 96 40 chr13 103519803 103519955 -16764357 + B3 SINE B2 1 165 -51 3 1374 207 0 0 0 chr13 103519955 103519978 -16764334 + (TG)n Simple_repeat Simple_repeat 1 23 0 3 1374 742 218 96 40 chr13 103519978 103520002 -16764310 + B3 SINE B2 166 186 -30 3 1374 189 121 0 0 chr13 103520003 103520036 -16764276 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1374 210 91 0 0 chr13 103520059 103520092 -16764220 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1374 210 91 0 0 chr13 103520115 103520148 -16764164 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1374 450 0 0 0 chr13 103521595 103521645 -16762667 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1374 217 51 0 49 chr13 103521821 103521862 -16762450 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1374 307 77 0 71 chr13 103523558 103523628 -16760684 + (CAAAA)n Simple_repeat Simple_repeat 2 66 0 4 1374 258 32 0 0 chr13 103524477 103524508 -16759804 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1374 225 154 0 0 chr13 103526376 103526415 -16757897 + (TGG)n Simple_repeat Simple_repeat 1 39 0 4 1374 1012 216 5 20 chr13 103530219 103530417 -16753895 + B3 SINE B2 10 204 -12 4 1374 235 250 26 115 chr13 103530609 103530722 -16753590 + MT2B2 LTR ERVL 150 252 -332 4 1374 422 224 26 53 chr13 103530634 103530747 -16753565 + B1F1 SINE Alu 11 120 -29 4 1374 519 289 37 19 chr13 103531589 103531751 -16752561 + RSINE1 SINE B4 1 165 0 4 1374 280 221 76 25 chr13 103532469 103532548 -16751764 + MIRb SINE MIR 183 265 -3 4 1374 226 310 17 17 chr13 103533327 103533386 -16750926 - ID4 SINE ID -14 69 11 4 1374 903 151 215 0 chr13 103533637 103533823 -16750489 - URR1A DNA MER1_type 0 226 1 5 1374 481 322 0 0 chr13 103534285 103534434 -16749878 - B1F SINE Alu 0 149 1 5 1374 309 322 121 39 chr13 103535836 103536043 -16748269 + MIR SINE MIR 19 242 -20 5 1374 249 108 0 0 chr13 103536086 103536123 -16748189 + (TG)n Simple_repeat Simple_repeat 1 37 0 5 1374 720 249 72 63 chr13 103536155 103536303 -16748009 - B4 SINE B4 -67 225 74 5 1374 952 145 215 0 chr13 103536303 103536489 -16747823 + URR1A DNA MER1_type 1 226 0 5 1374 720 249 72 63 chr13 103536489 103536563 -16747749 - B4 SINE B4 -219 73 1 5 1374 240 131 56 28 chr13 103537948 103538019 -16746293 + (TA)n Simple_repeat Simple_repeat 1 73 0 5 1374 329 157 52 9 chr13 103538033 103538149 -16746163 + (TA)n Simple_repeat Simple_repeat 1 121 0 5 1374 1044 237 160 45 chr13 103538151 103538527 -16745785 + MTD LTR MaLR 1 419 0 5 1374 771 127 58 29 chr13 103538560 103538688 -16745624 + B1_Mur4 SINE Alu 2 129 -21 5 1374 264 59 0 0 chr13 103538688 103538722 -16745590 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 5 1374 180 237 143 13 chr13 103538839 103538916 -16745396 + L3 LINE CR1 3517 3603 -886 6 1374 210 37 0 0 chr13 103539837 103539864 -16744448 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 6 1374 436 318 79 7 chr13 103541030 103541182 -16743130 + B3A SINE B2 1 163 -35 6 1374 379 329 42 14 chr13 103542357 103542499 -16741813 + MLT1A0 LTR MaLR 13 158 -207 6 1374 1972 212 50 40 chr13 103545621 103546117 -16738195 + RLTR20B3 LTR ERVK 21 521 -56 6 1374 207 0 0 0 chr13 103546130 103546153 -16738159 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 6 1375 225 342 76 8 chr13 103548929 103549047 -16735265 + MER5A DNA MER1_type 1 126 -63 6 1375 227 286 12 89 chr13 103549287 103549347 -16734965 + ORR1B1-int LTR MaLR 599 749 -755 6 1375 407 231 0 87 chr13 103549347 103549451 -16734861 + MT2B LTR ERVL 163 257 -344 6 1375 942 138 0 0 chr13 103549358 103549496 -16734816 + B1_Mus1 SINE Alu 11 148 0 6 1375 198 0 0 0 chr13 103552369 103552391 -16731921 + (GGGTG)n Simple_repeat Simple_repeat 1 22 0 7 1375 282 95 0 0 chr13 103552676 103552718 -16731594 + (T)n Simple_repeat Simple_repeat 1 42 0 7 1375 855 171 0 14 chr13 103552721 103552869 -16731443 - B1_Mus1 SINE Alu 0 148 3 7 1375 409 262 35 123 chr13 103552723 103552893 -16731419 - B4 SINE B4 -69 223 69 7 1375 391 146 12 24 chr13 103553171 103553185 -16731127 + polypurine Low_complexity Low_complexity 4 17 0 7 1375 945 121 0 23 chr13 103553185 103553362 -16730950 + (GGGGA)n Simple_repeat Simple_repeat 4 176 0 7 1375 391 146 12 24 chr13 103553362 103553431 -16730881 + GA-rich Low_complexity Low_complexity 18 86 0 7 1375 260 307 118 41 chr13 103554990 103555160 -16729152 - MIRb SINE MIR -27 241 59 7 1375 243 0 0 0 chr13 103555217 103555244 -16729068 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1375 653 299 19 42 chr13 103556600 103556816 -16727496 - MER58A DNA MER1_type -2 222 12 7 1375 311 261 99 56 chr13 103556872 103557014 -16727298 - B1F1 SINE Alu 0 149 2 8 1375 423 0 0 0 chr13 103557751 103557798 -16726514 + (CA)n Simple_repeat Simple_repeat 1 47 0 8 1375 252 152 136 0 chr13 103561364 103561423 -16722889 - B3A SINE B2 -126 72 6 8 1375 600 197 0 57 chr13 103561711 103561835 -16722477 + PB1D9 SINE Alu 2 118 -2 8 1375 21 0 0 0 chr13 103562390 103562411 -16721901 + AT_rich Low_complexity Low_complexity 1 21 0 8 1375 1255 117 96 14 chr13 103563057 103563265 -16721047 + URR1A DNA MER1_type 1 225 -1 8 1375 249 33 0 0 chr13 103563687 103563717 -16720595 + (GA)n Simple_repeat Simple_repeat 1 30 0 8 1375 365 274 10 10 chr13 103563769 103563865 -16720447 + PB1D10 SINE Alu 2 97 -20 8 1375 193 29 59 0 chr13 103564682 103564716 -16719596 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 8 1375 21 36 0 0 chr13 103565499 103565527 -16718785 + AT_rich Low_complexity Low_complexity 1 28 0 8 1375 342 0 0 0 chr13 103565622 103565660 -16718652 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1375 459 270 27 0 chr13 103566268 103566379 -16717933 + ID_B1 SINE B4 107 220 -4 9 1375 506 254 21 21 chr13 103566410 103566551 -16717761 + ORR1E LTR MaLR 1 141 -218 9 1375 264 281 76 19 chr13 103566642 103566747 -16717565 + ORR1E LTR MaLR 267 377 -2 9 1375 974 154 7 0 chr13 103567780 103567929 -16716383 - B1_Mur4 SINE Alu 0 150 1 9 1375 21 0 0 0 chr13 103569392 103569413 -16714899 + AT_rich Low_complexity Low_complexity 1 21 0 9 1375 248 255 94 38 chr13 103570405 103570511 -16713801 + L1MA5A LINE L1 6139 6250 -47 9 1375 664 224 0 0 chr13 103570614 103570739 -16713573 + ID_B1 SINE B4 90 214 -10 9 1375 279 0 0 0 chr13 103571629 103571660 -16712652 + (CAA)n Simple_repeat Simple_repeat 1 31 0 9 1375 217 281 128 38 chr13 103574024 103574157 -16710155 + MIR SINE MIR 118 262 0 9 1375 927 140 0 74 chr13 103574374 103574536 -16709776 - B1_Mur4 SINE Alu 0 150 1 9 1375 3554 15 2 2 chr13 103575039 103575435 -16708877 + MTA_Mm LTR MaLR 1 396 0 1 1375 189 0 0 0 chr13 103575764 103575785 -16708527 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1375 21 0 0 0 chr13 103575981 103576002 -16708310 + AT_rich Low_complexity Low_complexity 1 21 0 1 1375 420 71 0 0 chr13 103576715 103576771 -16707541 + (TTTA)n Simple_repeat Simple_repeat 1 56 0 1 1375 1382 70 43 5 chr13 103577825 103578012 -16706300 + B2_Mm2 SINE B2 1 194 -1 1 1375 334 281 24 40 chr13 103578062 103578188 -16706124 - PB1 SINE Alu -2 125 2 1 1375 278 0 54 0 chr13 103580294 103580331 -16703981 + (TTTA)n Simple_repeat Simple_repeat 4 42 0 1 1375 270 81 0 0 chr13 103584766 103584803 -16699509 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 1 1375 180 27 53 26 chr13 103589117 103589155 -16695157 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 1 1375 260 227 91 0 chr13 103589554 103589620 -16694692 + ID4 SINE ID 2 73 -10 1 1375 360 43 0 0 chr13 103589769 103589815 -16694497 + (CA)n Simple_repeat Simple_repeat 2 47 0 1 1375 313 297 36 14 chr13 103589884 103590024 -16694288 + MER46C DNA MER2_type 66 208 -130 1 1375 1149 92 90 17 chr13 103590571 103590748 -16693564 + B2_Mm2 SINE B2 3 192 -3 1 1375 288 274 119 28 chr13 103590921 103591030 -16693282 - PB1 SINE Alu -8 119 1 1 1375 261 75 0 0 chr13 103591808 103591848 -16692464 + (T)n Simple_repeat Simple_repeat 1 40 0 1 1375 1167 68 0 0 chr13 103591848 103591996 -16692316 - B1_Mus1 SINE Alu 0 148 1 1 1375 25 31 0 0 chr13 103592054 103592086 -16692226 + AT_rich Low_complexity Low_complexity 1 32 0 1 1375 528 93 0 0 chr13 103592417 103592492 -16691820 + (TG)n Simple_repeat Simple_repeat 1 75 0 1 1375 1260 103 32 0 chr13 103592552 103592737 -16691575 + B2_Mm1t SINE B2 1 191 -2 1 1375 243 241 0 0 chr13 103592744 103592798 -16691514 + (TG)n Simple_repeat Simple_repeat 2 55 0 1 1375 26 50 0 0 chr13 103593095 103593135 -16691177 + AT_rich Low_complexity Low_complexity 1 40 0 1 1375 360 0 0 0 chr13 103595779 103595819 -16688493 + (TATG)n Simple_repeat Simple_repeat 1 40 0 1 1375 220 257 28 14 chr13 103597922 103597993 -16686319 + B4 SINE B4 10 81 -211 1 1375 21 0 0 0 chr13 103599140 103599161 -16685151 + AT_rich Low_complexity Low_complexity 1 21 0 1 1375 953 97 7 0 chr13 103599898 103600042 -16684270 + B1_Mus2 SINE Alu 3 147 0 1 1375 207 0 0 0 chr13 103600195 103600218 -16684094 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1375 225 254 0 16 chr13 103600458 103600522 -16683790 + G-rich Low_complexity Low_complexity 5 67 0 1 1375 216 67 0 0 chr13 103600815 103600845 -16683467 + (TGGGGG)n Simple_repeat Simple_repeat 5 34 0 1 1375 1865 253 41 47 chr13 103605610 103606386 -16677926 + Lx7 LINE L1 6806 7696 0 1 1375 196 272 42 42 chr13 103606426 103606522 -16677790 - L2 LINE L2 -861 2558 2463 1 1375 195 42 0 0 chr13 103606787 103606811 -16677501 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1375 510 191 13 105 chr13 103607025 103607101 -16677211 + URR1B DNA MER1_type 86 161 -64 1 1375 1809 171 13 3 chr13 103607101 103607407 -16676905 - RLTR27 LTR ERVK 0 309 1 1 1375 510 191 13 105 chr13 103607407 103607482 -16676830 + URR1B DNA MER1_type 162 223 -2 1 1375 451 228 15 23 chr13 103609461 103609591 -16674721 - Tigger7 DNA MER2_type -32 2459 2331 1 1375 232 200 15 15 chr13 103609843 103609909 -16674403 + CT-rich Low_complexity Low_complexity 1 66 0 1 1375 307 244 0 11 chr13 103610138 103610225 -16674087 - Tigger7 DNA MER2_type -2054 437 352 1 1375 1102 139 14 47 chr13 103610620 103610832 -16673480 + URR1A DNA MER1_type 22 226 0 1 1375 1504 189 21 0 chr13 103611516 103611797 -16672515 - Lx9 LINE L1 -751 6893 6607 1 1375 1723 197 74 0 chr13 103611791 103612142 -16672170 + Lx9 LINE L1 7108 7484 -160 1 1375 28 29 0 0 chr13 103612234 103612269 -16672043 + AT_rich Low_complexity Low_complexity 1 35 0 1 1375 938 302 35 23 chr13 103612554 103612950 -16671362 + L1MA4 LINE L1 5381 5781 -519 1 1375 646 263 78 88 chr13 103612955 103613121 -16671191 + B3A SINE B2 3 166 -29 1 1375 183 100 0 0 chr13 103613121 103613151 -16671161 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1375 372 263 78 88 chr13 103613151 103613176 -16671136 + B2_Mm2 SINE B2 167 192 -3 1 1375 326 234 101 7 chr13 103613176 103613314 -16670998 + L1MA4 LINE L1 5777 5927 -373 1 1375 24 32 0 0 chr13 103613422 103613453 -16670859 + AT_rich Low_complexity Low_complexity 1 31 0 1 1375 956 227 10 5 chr13 103614766 103614965 -16669347 - B3 SINE B2 0 216 17 1 1375 423 0 0 0 chr13 103614969 103615016 -16669296 + (TC)n Simple_repeat Simple_repeat 1 47 0 1 1375 288 0 0 0 chr13 103615255 103615287 -16669025 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1375 434 165 216 18 chr13 103615352 103615463 -16668849 + B1F2 SINE Alu 1 133 -16 1 1375 261 0 0 0 chr13 103615463 103615492 -16668820 + (CATA)n Simple_repeat Simple_repeat 4 32 0 1 1375 1344 73 0 0 chr13 103615492 103615725 -16668587 + (CA)n Simple_repeat Simple_repeat 1 233 0 1 1375 486 288 30 30 chr13 103616074 103616239 -16668073 + MER5B DNA MER1_type 3 167 -11 1 1375 287 182 138 52 chr13 103616319 103616435 -16667877 - MER5B DNA MER1_type -28 150 25 1 1375 374 281 0 0 chr13 103616866 103616955 -16667357 + ID_B1 SINE B4 80 168 -56 1 1375 2220 87 60 17 chr13 103617184 103617536 -16666776 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1375 56427 27 8 5 chr13 103617536 103623984 -16660328 + IAPEz-int LTR ERVK 8 6479 -2 1 1375 2220 87 60 17 chr13 103623986 103624338 -16659974 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1375 408 111 0 0 chr13 103624515 103624587 -16659725 + (GA)n Simple_repeat Simple_repeat 1 72 0 1 1375 357 24 0 0 chr13 103625228 103625270 -16659042 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1375 228 284 24 24 chr13 103626000 103626083 -16658229 - ID4_ SINE ID 0 83 1 1 1375 252 339 78 33 chr13 103626182 103626426 -16657886 - L1M5 LINE L1 -403 5721 5467 1 1375 610 246 53 0 chr13 103626767 103626938 -16657374 - B3A SINE B2 -16 182 3 1 1375 1221 158 13 47 chr13 103626938 103627171 -16657141 + URR1B DNA MER1_type 1 225 0 1 1375 186 57 129 0 chr13 103627192 103627262 -16657050 + (TA)n Simple_repeat Simple_repeat 1 79 0 1 1375 654 134 6 96 chr13 103627829 103627971 -16656341 + B1_Mur4 SINE Alu 6 137 -13 1 1375 324 0 0 0 chr13 103627971 103628007 -16656305 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 1 1375 654 134 6 96 chr13 103628007 103628021 -16656291 + B1_Mur4 SINE Alu 138 148 -2 1 1375 243 286 33 25 chr13 103628815 103628937 -16655375 - L1M5 LINE L1 -2135 4011 3889 1 1375 198 71 0 0 chr13 103629084 103629112 -16655200 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1375 649 180 0 0 chr13 103629255 103629366 -16654946 - B1_Mus2 SINE Alu -36 111 1 1 1375 375 298 48 40 chr13 103629263 103629389 -16654923 - B4A SINE B4 -98 194 68 1 1375 390 42 0 0 chr13 103630523 103630571 -16653741 + (TG)n Simple_repeat Simple_repeat 2 49 0 1 1375 394 248 229 0 chr13 103631686 103631791 -16652521 - RSINE1 SINE B4 -18 147 19 1 1375 194 192 19 0 chr13 103632093 103632145 -16652167 + (TA)n Simple_repeat Simple_repeat 2 54 0 1 1375 2701 112 17 26 chr13 103633522 103633553 -16650759 + RLTR28 LTR ERVL 58 87 -437 1 1375 308 24 24 0 chr13 103633553 103633594 -16650718 + (CAA)n Simple_repeat Simple_repeat 2 43 0 1 1375 2701 112 17 26 chr13 103633594 103634029 -16650283 + RLTR28 LTR ERVL 88 520 -4 1 1375 1162 17 20 45 chr13 103634118 103634365 -16649947 + (GTGTG)n Simple_repeat Simple_repeat 1 240 0 1 1375 208 131 42 28 chr13 103634378 103634449 -16649863 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1375 281 268 0 11 chr13 103634449 103634536 -16649776 - RSINE1 SINE B4 -2 163 78 1 1375 344 309 18 18 chr13 103634783 103634895 -16649417 + B1F1 SINE Alu 26 137 -12 1 1375 594 75 0 0 chr13 103635158 103635238 -16649074 + (CAGA)n Simple_repeat Simple_repeat 1 80 0 1 1375 342 0 0 0 chr13 103636010 103636048 -16648264 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1375 1384 76 16 5 chr13 103636345 103636530 -16647782 - B2_Mm2 SINE B2 -8 187 1 1 1375 258 95 0 0 chr13 103636834 103636876 -16647436 + (A)n Simple_repeat Simple_repeat 1 42 0 1 1375 678 256 22 50 chr13 103637091 103637313 -16646999 + B3 SINE B2 1 216 0 1 1375 348 64 0 0 chr13 103638405 103638452 -16645860 + (TG)n Simple_repeat Simple_repeat 1 47 0 1 1375 835 149 21 57 chr13 103638479 103638671 -16645641 + B2_Mm2 SINE B2 6 190 -5 1 1375 594 0 0 0 chr13 103638671 103638737 -16645575 + (GAAA)n Simple_repeat Simple_repeat 2 67 0 1 1375 743 322 152 43 chr13 103638979 103639494 -16644818 + MLT1E3 LTR MaLR 46 616 -8 1 1375 800 213 7 0 chr13 103641669 103641810 -16642502 + B1_Mur1 SINE Alu 1 142 -7 1 1375 323 221 20 157 chr13 103641978 103642080 -16642232 + Lx7 LINE L1 6197 6284 -1412 1 1375 1535 220 229 25 chr13 103642057 103642490 -16641822 + Lx7 LINE L1 6909 7415 -281 1 1375 315 0 0 0 chr13 103642490 103642525 -16641787 + (TG)n Simple_repeat Simple_repeat 1 35 0 1 1375 314 271 168 64 chr13 103642525 103642765 -16641547 + Lx7 LINE L1 7416 7696 0 1 1375 217 185 45 15 chr13 103642801 103642857 -16641455 + (TA)n Simple_repeat Simple_repeat 1 59 0 1 1375 252 86 0 0 chr13 103642857 103642892 -16641420 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1375 217 185 45 15 chr13 103642892 103642901 -16641411 + (TA)n Simple_repeat Simple_repeat 2 10 0 1 1375 244 346 29 29 chr13 103645071 103645211 -16639101 + B1F1 SINE Alu 1 140 -9 1 1375 228 300 0 24 chr13 103645233 103645315 -16638997 + ID4_ SINE ID 2 81 -2 1 1375 22 56 0 0 chr13 103646195 103646231 -16638081 + AT_rich Low_complexity Low_complexity 1 36 0 1 1375 21 36 0 0 chr13 103646315 103646343 -16637969 + AT_rich Low_complexity Low_complexity 1 28 0 1 1375 983 137 70 21 chr13 103646495 103646664 -16637648 + B2_Mm2 SINE B2 1 174 -21 1 1375 1215 61 0 0 chr13 103646664 103646811 -16637501 + B1_Mm SINE Alu 1 147 0 1 1375 983 137 70 21 chr13 103646811 103646827 -16637485 + B2_Mm2 SINE B2 175 195 0 1 1375 213 211 0 0 chr13 103646827 103646865 -16637447 + GA-rich Low_complexity Low_complexity 4 41 0 1 1375 441 36 0 0 chr13 103647220 103647275 -16637037 + (CA)n Simple_repeat Simple_repeat 1 55 0 1 1375 335 145 12 0 chr13 103647907 103647990 -16636322 + CT-rich Low_complexity Low_complexity 2 85 0 1 1375 369 0 0 0 chr13 103647990 103648031 -16636281 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1375 417 316 26 45 chr13 103649414 103649570 -16634742 - ID_B1 SINE B4 -71 153 1 1 1375 183 100 0 0 chr13 103649599 103649629 -16634683 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1375 265 253 92 54 chr13 103649907 103650091 -16634221 + LTR37A LTR ERV1 209 399 -27 2 1375 221 270 81 0 chr13 103650939 103651013 -16633299 - L2a LINE L2 -250 3176 3097 2 1375 234 295 0 0 chr13 103651692 103651753 -16632559 + (TA)n Simple_repeat Simple_repeat 2 62 0 2 1375 3988 117 16 10 chr13 103651807 103652394 -16631918 + Lx4A LINE L1 6448 7040 -18 2 1375 198 0 0 0 chr13 103652394 103652416 -16631896 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 2 1375 3988 117 16 10 chr13 103652416 103652435 -16631877 + Lx4A LINE L1 7041 7058 0 2 1375 336 319 68 55 chr13 103652921 103653067 -16631245 + RSINE1 SINE B4 4 151 -14 2 1375 252 0 0 0 chr13 103653565 103653593 -16630719 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1375 657 230 0 26 chr13 103653598 103653750 -16630562 - B1_Mur1 SINE Alu -1 148 1 2 1375 304 238 34 91 chr13 103654631 103654719 -16629593 - B1F SINE Alu -66 83 1 2 1375 370 181 74 68 chr13 103655035 103655183 -16629129 - B1_Mur3 SINE Alu 0 149 1 2 1375 508 212 6 2 chr13 103655242 103655359 -16628953 + B1_Mur4 SINE Alu 28 149 -1 2 1375 420 181 0 0 chr13 103655374 103655457 -16628855 + GA-rich Low_complexity Low_complexity 3 85 0 2 1375 606 28 0 0 chr13 103655554 103655626 -16628686 + (TG)n Simple_repeat Simple_repeat 1 72 0 2 1375 276 325 13 0 chr13 103655695 103655772 -16628540 + ID4_ SINE ID 6 83 0 2 1375 352 247 39 0 chr13 103657072 103657149 -16627163 + PB1D7 SINE Alu 41 120 0 2 1375 4875 71 42 41 chr13 103657625 103658360 -16625952 - MusHAL1 LINE L1 -1015 1697 962 2 1375 227 33 0 0 chr13 103658361 103658391 -16625921 + MusHAL1 LINE L1 1242 1271 -1441 2 1375 443 164 0 0 chr13 103658990 103659063 -16625249 - PB1D10 SINE Alu -22 95 23 2 1375 236 258 16 16 chr13 103659355 103659418 -16624894 + B1F2 SINE Alu 2 64 -85 2 1375 211 353 12 12 chr13 103659358 103659444 -16624868 + ID_B1 SINE B4 86 171 -53 2 1375 236 262 75 0 chr13 103661272 103661352 -16622960 + BC1_Mm scRNA scRNA 7 92 -60 2 1375 23 0 0 0 chr13 103661565 103661588 -16622724 + AT_rich Low_complexity Low_complexity 1 23 0 2 1375 23 0 0 0 chr13 103662378 103662401 -16621911 + AT_rich Low_complexity Low_complexity 1 23 0 2 1375 258 32 0 0 chr13 103663276 103663307 -16621005 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2 1375 219 188 0 0 chr13 103665596 103665644 -16618668 + T-rich Low_complexity Low_complexity 1 48 0 2 1375 1390 82 16 16 chr13 103666262 103666448 -16617864 - B2_Mm2 SINE B2 -8 187 2 2 1375 228 200 0 0 chr13 103668372 103668417 -16615895 - MamSINE1 SINE tRNA -229 61 17 2 1375 414 0 0 0 chr13 103668598 103668644 -16615668 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1375 861 258 156 54 chr13 103668665 103669017 -16615295 + MTD LTR MaLR 18 405 -14 2 1375 436 221 20 127 chr13 103669879 103670029 -16614283 + B1F SINE Alu 15 148 -1 2 1375 221 151 12 88 chr13 103670029 103670109 -16614203 + (CAAA)n Simple_repeat Simple_repeat 1 74 0 2 1375 506 139 97 12 chr13 103670192 103670309 -16614003 + B1_Mur2 SINE Alu 8 129 -20 2 1375 474 33 0 0 chr13 103671276 103671336 -16612976 + (TCTCTG)n Simple_repeat Simple_repeat 2 61 0 2 1375 641 179 249 29 chr13 103672559 103672732 -16611580 + B3 SINE B2 5 215 -1 2 1375 449 221 43 26 chr13 103673428 103673544 -16610768 + PB1D7 SINE Alu 3 120 0 2 1375 264 286 181 16 chr13 103674218 103674466 -16609846 + Charlie4a DNA MER1_type 152 440 -68 2 1375 831 237 23 28 chr13 103674466 103674683 -16609629 + B3 SINE B2 1 216 0 2 1375 207 0 0 0 chr13 103674917 103674940 -16609372 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 2 1375 1182 54 0 33 chr13 103675065 103675202 -16609110 + B1_Mus1 SINE Alu 1 136 -12 2 1375 249 57 0 0 chr13 103675202 103675237 -16609075 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2 1375 1182 54 0 33 chr13 103675237 103675252 -16609060 + B1_Mus1 SINE Alu 137 148 0 2 1375 289 98 32 32 chr13 103675323 103675386 -16608926 + A-rich Low_complexity Low_complexity 3 65 0 2 1375 819 137 15 0 chr13 103675390 103675521 -16608791 + B1_Mur4 SINE Alu 1 133 -17 2 1375 350 272 23 31 chr13 103677132 103677261 -16607051 + L1M5 LINE L1 5580 5707 -417 2 1375 268 227 30 15 chr13 103677270 103677337 -16606975 - MIRm SINE MIR -3 273 206 2 1375 470 241 17 33 chr13 103677569 103677689 -16606623 + RSINE1 SINE B4 2 119 -46 2 1375 461 205 124 36 chr13 103677721 103677858 -16606454 - B1_Mur1 SINE Alu 0 149 1 2 171 207 69 0 0 chr13 103677929 103677958 -16606354 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1376 481 213 68 38 chr13 103678013 103678145 -16606167 - B4 SINE B4 -4 288 153 2 1376 207 100 0 0 chr13 103678182 103678212 -16606100 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2 1376 480 286 0 90 chr13 103678241 103678418 -16605894 - RSINE1 SINE B4 0 165 5 2 1376 537 281 0 27 chr13 103679703 103679853 -16604459 + RSINE1 SINE B4 5 150 -15 2 1376 180 0 0 0 chr13 103680349 103680369 -16603943 + (CCCCCG)n Simple_repeat Simple_repeat 3 22 0 2 1376 25 0 0 0 chr13 103680526 103680551 -16603761 + AT_rich Low_complexity Low_complexity 1 25 0 2 1376 211 220 0 57 chr13 103681116 103681169 -16603143 + polypyrimidine Low_complexity Low_complexity 2 51 0 2 1376 303 299 34 34 chr13 103681287 103681436 -16602876 - B1F SINE Alu 0 149 1 2 1376 23 0 0 0 chr13 103681564 103681587 -16602725 + AT_rich Low_complexity Low_complexity 1 23 0 2 1376 195 42 0 0 chr13 103681983 103682007 -16602305 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 1376 354 252 75 0 chr13 103682389 103682496 -16601816 - B1F SINE Alu -34 115 1 2 1376 796 143 0 0 chr13 103682537 103682663 -16601649 + B3 SINE B2 5 130 -86 2 1376 198 0 0 0 chr13 103682688 103682710 -16601602 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1376 484 204 120 0 chr13 103685639 103685747 -16598565 + RSINE1 SINE B4 1 121 -44 2 1376 294 106 0 0 chr13 103685785 103685832 -16598480 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1376 208 135 0 0 chr13 103686825 103686862 -16597450 + (T)n Simple_repeat Simple_repeat 1 37 0 2 1376 304 206 0 27 chr13 103688599 103688674 -16595638 - B1_Mm SINE Alu -47 100 28 2 1376 546 250 14 27 chr13 103689231 103689379 -16594933 - B1F2 SINE Alu -3 146 1 2 1376 372 119 0 0 chr13 103689418 103689477 -16594835 + (GGGGA)n Simple_repeat Simple_repeat 4 62 0 2 1376 726 44 0 0 chr13 103690171 103690261 -16594051 + (TC)n Simple_repeat Simple_repeat 2 91 0 2 1376 180 0 0 0 chr13 103691064 103691084 -16593228 + (CA)n Simple_repeat Simple_repeat 1 20 0 2 1376 233 314 57 41 chr13 103691090 103691213 -16593099 - MIRb SINE MIR -103 165 41 2 1376 261 0 0 0 chr13 103691979 103692008 -16592304 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1376 575 152 18 9 chr13 103692194 103692307 -16592005 + URR1A DNA MER1_type 37 150 -76 2 1376 1238 34 0 0 chr13 103693445 103693592 -16590720 - B1_Mus1 SINE Alu 0 148 2 2 1376 201 39 0 0 chr13 103694370 103694396 -16589916 + (TC)n Simple_repeat Simple_repeat 1 26 0 2 1376 456 19 0 0 chr13 103694396 103694448 -16589864 + (CA)n Simple_repeat Simple_repeat 1 53 0 2 1376 671 155 17 22 chr13 103694970 103695148 -16589164 + (TA)n Simple_repeat Simple_repeat 1 177 0 2 1376 198 0 0 0 chr13 103695819 103695841 -16588471 + (TTTC)n Simple_repeat Simple_repeat 3 24 0 2 1376 243 0 0 0 chr13 103697079 103697106 -16587206 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1376 366 259 8 33 chr13 103697584 103697704 -16586608 + PB1D10 SINE Alu 1 117 0 2 1376 256 193 0 0 chr13 103697942 103697999 -16586313 + T-rich Low_complexity Low_complexity 1 57 0 2 1376 831 63 111 0 chr13 103697999 103698125 -16586187 - B1_Mus2 SINE Alu 0 147 8 2 1376 490 274 122 7 chr13 103698130 103698277 -16586035 - B3A SINE B2 -34 164 1 2 1376 306 293 65 65 chr13 103698635 103698821 -16585491 + MIRb SINE MIR 65 250 -18 2 1376 585 320 0 0 chr13 103699890 103700043 -16584269 - B3A SINE B2 -21 177 25 2 1376 214 238 15 31 chr13 103700052 103700117 -16584195 - B3A SINE B2 -134 64 1 2 1376 1386 62 62 0 chr13 103701411 103701604 -16582708 + L1_Mus1 LINE L1 6363 6567 0 2 1376 242 29 29 0 chr13 103702013 103702048 -16582264 + (TGGGGG)n Simple_repeat Simple_repeat 6 41 0 2 1376 1792 164 80 20 chr13 103702577 103702926 -16581386 + ORR1D1 LTR MaLR 5 374 0 2 1376 223 258 76 0 chr13 103703259 103703325 -16580987 + L2c LINE L2 3272 3342 -45 2 1376 251 132 0 0 chr13 103704515 103704553 -16579759 + RLTR24 LTR ERV1 1 38 -491 2 1376 1948 159 50 22 chr13 103704551 103704911 -16579401 + ORR1B1 LTR MaLR 25 394 0 2 1376 2286 148 57 55 chr13 103704911 103704964 -16579348 + RLTR24 LTR ERV1 37 88 -441 2 1376 2832 98 48 10 chr13 103704964 103705378 -16578934 + RLTR23 LTR ERV1 1 430 0 2 1376 2286 148 57 55 chr13 103705378 103705816 -16578496 + RLTR24 LTR ERV1 89 529 0 2 1376 414 0 0 0 chr13 103705903 103705949 -16578363 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1376 315 0 0 0 chr13 103706694 103706729 -16577583 + (TG)n Simple_repeat Simple_repeat 2 36 0 2 1376 466 297 20 13 chr13 103706730 103706880 -16577432 - ID_B1 SINE B4 -57 167 17 2 1376 24 53 0 0 chr13 103707182 103707220 -16577092 + AT_rich Low_complexity Low_complexity 1 38 0 2 1376 957 42 0 0 chr13 103707994 103708112 -16576200 + (GA)n Simple_repeat Simple_repeat 1 118 0 2 1376 568 161 0 35 chr13 103708137 103708253 -16576059 - B1_Mur4 SINE Alu -1 149 38 2 1376 196 353 95 0 chr13 103708477 103708593 -16575719 + MER5A DNA MER1_type 61 187 -2 2 1376 450 343 48 27 chr13 103708778 103709072 -16575240 + L2c LINE L2 3042 3341 -46 2 1376 32 0 0 0 chr13 103709262 103709294 -16575018 + AT_rich Low_complexity Low_complexity 1 32 0 3 1376 689 215 37 0 chr13 103709332 103709467 -16574845 - B3 SINE B2 -63 153 14 3 1376 839 230 80 0 chr13 103709469 103709669 -16574643 - B3 SINE B2 0 216 1 3 1376 1211 40 0 0 chr13 103710281 103710429 -16573883 + B1_Mus1 SINE Alu 1 148 0 3 1376 1168 68 0 7 chr13 103710965 103711113 -16573199 - B1_Mus1 SINE Alu 0 148 2 3 1376 652 199 41 34 chr13 103711147 103711293 -16573019 + B1_Mur2 SINE Alu 3 149 0 3 1376 311 272 0 32 chr13 103711723 103711818 -16572494 - MLT1A1 LTR MaLR 0 408 317 3 1376 1378 87 16 5 chr13 103712516 103712702 -16571610 + B2_Mm2 SINE B2 2 189 -6 3 1376 561 275 28 28 chr13 103712735 103712911 -16571401 - B3A SINE B2 -22 176 1 3 1376 29 0 0 0 chr13 103713098 103713127 -16571185 + AT_rich Low_complexity Low_complexity 1 29 0 3 1376 426 209 66 0 chr13 103713279 103713370 -16570942 + B3 SINE B2 1 97 -119 3 1376 3526 35 0 23 chr13 103713927 103714380 -16569932 + L1Md_F3 LINE L1 6140 6584 0 3 1376 3526 35 0 23 chr13 103714380 103714398 -16569914 + L1Md_F3 LINE L1 6560 6570 -14 3 1376 21 36 0 0 chr13 103714525 103714553 -16569759 + AT_rich Low_complexity Low_complexity 1 28 0 3 1376 268 246 0 0 chr13 103714859 103714928 -16569384 + GA-rich Low_complexity Low_complexity 1 69 0 3 1376 295 295 55 55 chr13 103715256 103715421 -16568891 + MIR SINE MIR 6 170 -92 3 1376 1592 187 11 41 chr13 103715536 103715899 -16568413 + ORR1D1 LTR MaLR 1 352 -22 3 1376 487 15 29 15 chr13 103716636 103716704 -16567608 + (GAAA)n Simple_repeat Simple_repeat 3 71 0 3 1376 477 106 26 26 chr13 103719522 103719638 -16564674 + (TA)n Simple_repeat Simple_repeat 2 117 0 3 1376 782 279 34 10 chr13 103720072 103720278 -16564034 + B3 SINE B2 4 214 -2 3 1376 905 182 154 5 chr13 103720525 103720713 -16563599 + B3 SINE B2 1 216 0 3 1376 441 302 88 63 chr13 103721219 103721628 -16562684 - RLTR11A2 LTR ERVK -16 511 116 3 1376 415 166 4 0 chr13 103721834 103721929 -16562383 + B1_Mus2 SINE Alu 20 116 -32 3 1376 1760 149 14 115 chr13 103723233 103723597 -16560715 + ORR1A4 LTR MaLR 3 329 0 3 1376 456 268 128 16 chr13 103725256 103725381 -16558931 + B1_Mm SINE Alu 2 140 -7 3 1376 491 0 17 0 chr13 103725875 103725934 -16558378 + (CA)n Simple_repeat Simple_repeat 2 61 0 3 1376 196 30 0 57 chr13 103727158 103727193 -16557119 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 3 1376 200 132 26 0 chr13 103727207 103727245 -16557067 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1376 297 16 79 16 chr13 103727275 103727338 -16556974 + (CAAAA)n Simple_repeat Simple_repeat 1 67 0 3 1376 531 0 0 0 chr13 103728064 103728123 -16556189 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 3 1376 318 322 81 16 chr13 103729137 103729323 -16554989 - MLT1D LTR MaLR 0 505 308 3 1376 574 298 85 106 chr13 103729381 103729674 -16554638 - B4A SINE B4 0 292 6 3 1376 270 275 107 53 chr13 103729685 103729854 -16554458 - MLT1D LTR MaLR -319 186 9 3 1376 28 0 0 0 chr13 103730134 103730162 -16554150 + AT_rich Low_complexity Low_complexity 1 28 0 3 1376 420 209 73 45 chr13 103730751 103730861 -16553451 + L1MC4 LINE L1 6875 6987 -1055 3 1376 2703 152 35 16 chr13 103731425 103731880 -16552432 + RLTR20B2 LTR ERVK 1 464 -96 3 1376 384 22 0 0 chr13 103731880 103731925 -16552387 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1376 2703 152 35 16 chr13 103731925 103731985 -16552327 + RLTR20B2 LTR ERVK 465 526 -34 3 1376 232 316 0 17 chr13 103732095 103732153 -16552159 + ID4 SINE ID 18 74 -9 3 1376 996 144 34 28 chr13 103732608 103732787 -16551525 + B2_Mm2 SINE B2 1 180 -15 3 1376 861 262 50 50 chr13 103733107 103733445 -16550867 - MTE2a LTR MaLR -41 338 1 3 1376 504 257 0 0 chr13 103733562 103733663 -16550649 + B1F1 SINE Alu 48 148 -1 3 1376 216 228 88 12 chr13 103734091 103734171 -16550141 - MIRb SINE MIR -58 210 125 3 1376 220 304 0 0 chr13 103734418 103734487 -16549825 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1376 185 132 26 0 chr13 103735827 103735865 -16548447 + (TA)n Simple_repeat Simple_repeat 1 39 0 3 1376 438 278 9 0 chr13 103735869 103735977 -16548335 + PB1D10 SINE Alu 1 109 -8 3 1376 383 286 140 72 chr13 103737365 103737629 -16546683 - B4 SINE B4 -2 290 9 3 1376 239 258 43 43 chr13 103737918 103738011 -16546301 - Tigger5 DNA MER2_type -2299 107 15 3 1376 279 0 0 0 chr13 103739637 103739668 -16544644 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 3 1376 761 258 69 29 chr13 103740434 103740638 -16543674 - ID_B1 SINE B4 -7 217 6 3 1376 530 67 13 0 chr13 103740756 103740831 -16543481 + (GA)n Simple_repeat Simple_repeat 1 76 0 3 1376 258 32 0 0 chr13 103740913 103740944 -16543368 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1376 540 0 0 0 chr13 103740944 103741003 -16543309 + (GA)n Simple_repeat Simple_repeat 1 60 0 3 1376 225 211 0 0 chr13 103741091 103741143 -16543169 + GA-rich Low_complexity Low_complexity 2 53 0 3 1376 571 307 15 0 chr13 103741151 103741288 -16543024 - RSINE1 SINE B4 -24 141 3 3 1376 242 287 192 6 chr13 103742167 103742339 -16541973 + ORR1E LTR MaLR 19 222 -137 3 1376 233 236 81 27 chr13 103742516 103742590 -16541722 + ORR1E LTR MaLR 290 367 -12 3 1376 180 0 0 0 chr13 103742601 103742621 -16541691 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 3 1376 209 149 0 41 chr13 103743812 103743861 -16540451 + T-rich Low_complexity Low_complexity 2 48 0 3 1376 488 324 84 40 chr13 103744223 103744474 -16539838 - B4A SINE B4 0 292 31 3 1376 3599 66 4 6 chr13 103744711 103745184 -16539128 - L1_Mus3 LINE L1 0 6638 6167 3 1376 203 189 0 0 chr13 103747486 103747523 -16536789 + A-rich Low_complexity Low_complexity 1 37 0 3 1376 180 0 0 0 chr13 103748439 103748459 -16535853 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1376 22 0 0 0 chr13 103750083 103750105 -16534207 + AT_rich Low_complexity Low_complexity 1 22 0 3 1376 180 152 0 0 chr13 103750470 103750503 -16533809 + GA-rich Low_complexity Low_complexity 2 34 0 3 1376 281 276 209 62 chr13 103750510 103750897 -16533415 + L1MC5 LINE L1 6974 7417 -544 3 1376 1186 197 92 7 chr13 103751052 103751333 -16532979 - ORR1B2 LTR MaLR -8 359 55 3 1376 1291 266 52 19 chr13 103751483 103751847 -16532465 - MTE2b LTR MaLR 0 379 4 3 1376 236 275 164 9 chr13 103752180 103752290 -16532022 + ORR1E LTR MaLR 1 127 -232 3 1376 706 217 194 0 chr13 103753002 103753182 -16531130 - B3 SINE B2 0 216 2 3 1376 480 219 31 88 chr13 103753269 103753429 -16530883 + MER20 DNA MER1_type 43 193 -26 3 1376 240 315 65 52 chr13 103754154 103754308 -16530004 + L1M4 LINE L1 4080 4235 -1911 3 1376 477 0 0 0 chr13 103754362 103754415 -16529897 + (T)n Simple_repeat Simple_repeat 1 53 0 3 1376 351 338 48 17 chr13 103754540 103754835 -16529477 + L1MDa LINE L1 1557 1860 -4773 3 1376 2779 42 0 0 chr13 103754836 103755167 -16529145 - L1_Mus1 LINE L1 0 6567 6237 3 1376 6203 111 7 60 chr13 103755167 103756161 -16528151 - L1Md_A LINE L1 0 6582 5642 3 1376 204 200 0 0 chr13 103756543 103756598 -16527714 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1376 4885 99 1 1 chr13 103756728 103757397 -16526915 - L1_Mm LINE L1 -224 5659 4991 3 1376 195 273 92 38 chr13 103757591 103757671 -16526641 - L2c LINE L2 -2 3424 3315 3 1376 3515 25 2 0 chr13 103757950 103758345 -16525967 - MTA_Mm LTR MaLR 0 396 1 3 1376 296 24 0 24 chr13 103758626 103758668 -16525644 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 3 1376 561 200 56 62 chr13 103758680 103758824 -16525488 - B1_Mur2 SINE Alu -6 143 1 3 1376 655 228 21 0 chr13 103758841 103758986 -16525326 + B1_Mur4 SINE Alu 1 148 -2 3 1376 201 195 0 0 chr13 103758990 103759031 -16525281 + (CAA)n Simple_repeat Simple_repeat 2 42 0 3 1376 207 0 0 0 chr13 103759521 103759544 -16524768 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1376 492 274 8 0 chr13 103760101 103760225 -16524087 + MLT1D LTR MaLR 377 501 -4 3 1376 2440 98 0 3 chr13 103760392 103760720 -16523592 + ORR1A2 LTR MaLR 1 327 0 3 1376 22 56 0 0 chr13 103760891 103760927 -16523385 + AT_rich Low_complexity Low_complexity 1 36 0 3 1376 466 232 10 0 chr13 103761264 103761363 -16522949 + PB1D10 SINE Alu 10 109 -8 3 1376 1841 142 115 6 chr13 103762146 103762494 -16521818 + ORR1B1 LTR MaLR 1 386 -8 3 1376 267 31 0 0 chr13 103762713 103762745 -16521567 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 3 1376 545 292 66 23 chr13 103762787 103762825 -16521487 + L1MB3 LINE L1 5917 5954 -229 3 1376 768 99 0 0 chr13 103762825 103762936 -16521376 + (GGAA)n Simple_repeat Simple_repeat 1 111 0 3 1376 545 292 66 23 chr13 103762936 103763153 -16521159 + L1MB3 LINE L1 5955 6182 -1 3 1376 405 0 0 0 chr13 103763495 103763540 -16520772 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1376 22 0 0 0 chr13 103765802 103765824 -16518488 + AT_rich Low_complexity Low_complexity 1 22 0 3 1376 369 0 0 0 chr13 103766082 103766123 -16518189 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 3 1376 473 305 0 15 chr13 103766123 103766256 -16518056 - ID_B1 SINE B4 -13 211 81 3 1376 243 170 0 0 chr13 103766855 103766902 -16517410 + (CACG)n Simple_repeat Simple_repeat 4 50 0 3 1376 1846 120 12 61 chr13 103767203 103767532 -16516780 + ORR1A3 LTR MaLR 3 315 -11 3 1376 903 137 225 42 chr13 103767745 103767936 -16516376 + URR1A DNA MER1_type 1 226 0 3 1376 276 316 0 0 chr13 103768185 103768261 -16516051 - ID_B1 SINE B4 -45 179 104 3 1376 975 233 139 34 chr13 103768379 103768711 -16515601 - MTD LTR MaLR -14 405 47 3 1376 1128 67 0 0 chr13 103769221 103769371 -16514941 + (CA)n Simple_repeat Simple_repeat 2 151 0 3 1376 261 0 0 0 chr13 103770124 103770153 -16514159 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 3 1376 288 0 0 0 chr13 103770440 103770472 -16513840 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1376 258 244 11 23 chr13 103770480 103770568 -16513744 - Lx7 LINE L1 -15 7681 7595 4 1376 288 0 0 0 chr13 103770575 103770607 -16513705 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 1376 241 211 0 19 chr13 103770675 103770728 -16513584 - Lx7 LINE L1 -485 7211 7160 4 1376 22 0 0 0 chr13 103771227 103771249 -16513063 + GC_rich Low_complexity Low_complexity 1 22 0 4 1376 803 183 0 21 chr13 103771251 103771396 -16512916 - B1_Mus1 SINE Alu -6 142 1 4 1376 2346 119 21 3 chr13 103771396 103771774 -16512538 - ORR1B1 LTR MaLR -9 385 1 4 1376 228 135 0 0 chr13 103771909 103771946 -16512366 + (TTTC)n Simple_repeat Simple_repeat 4 40 0 4 1376 558 83 83 0 chr13 103771946 103772042 -16512270 - B1_Mur4 SINE Alu 0 150 47 4 1376 282 87 0 0 chr13 103772143 103772189 -16512123 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 4 1376 936 250 14 9 chr13 103772354 103772568 -16511744 - B3 SINE B2 0 216 2 4 1376 245 279 0 65 chr13 103772863 103772955 -16511357 + MLT1E LTR MaLR 383 468 -185 4 1376 26 0 0 0 chr13 103773764 103773790 -16510522 + AT_rich Low_complexity Low_complexity 1 26 0 4 1376 237 325 17 42 chr13 103774424 103774543 -16509769 - MIRb SINE MIR -80 188 73 4 1376 749 236 79 15 chr13 103774705 103774907 -16509405 + B3 SINE B2 1 215 -1 4 1376 25 51 0 0 chr13 103775037 103775076 -16509236 + AT_rich Low_complexity Low_complexity 1 39 0 4 1376 26 64 0 0 chr13 103775119 103775166 -16509146 + AT_rich Low_complexity Low_complexity 1 47 0 4 1376 378 213 0 0 chr13 103775275 103775369 -16508943 + (TA)n Simple_repeat Simple_repeat 2 95 0 4 1376 886 110 16 0 chr13 103775480 103775633 -16508679 + B2_Mm2 SINE B2 1 169 -47 4 1376 328 247 23 12 chr13 103776106 103776192 -16508120 - B4A SINE B4 -4 288 202 4 1376 1207 105 60 6 chr13 103776463 103776645 -16507667 - B2_Mm2 SINE B2 -3 192 1 4 1376 215 363 76 32 chr13 103778167 103778352 -16505960 - MIRb SINE MIR -22 246 54 4 1376 211 54 26 26 chr13 103780524 103780562 -16503750 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 4 1376 552 271 75 0 chr13 103780582 103780770 -16503542 + L1MA5 LINE L1 5735 5936 -364 4 1376 885 257 37 9 chr13 103781346 103781562 -16502750 - ID_B1 SINE B4 0 224 3 4 1376 248 137 0 19 chr13 103784060 103784112 -16500200 + CT-rich Low_complexity Low_complexity 2 52 0 4 1376 342 0 0 0 chr13 103784113 103784151 -16500161 + (CA)n Simple_repeat Simple_repeat 2 39 0 4 1376 3479 28 0 10 chr13 103784654 103785054 -16499258 + MTA_Mm LTR MaLR 1 396 0 4 1376 1198 109 44 0 chr13 103785213 103785396 -16498916 - B2_Mm1t SINE B2 -2 191 1 4 1376 331 179 256 23 chr13 103785408 103785562 -16498750 - B2_Mm2 SINE B2 -4 191 2 4 1376 1180 109 29 0 chr13 103785562 103785736 -16498576 - B2_Mm1t SINE B2 -14 179 1 4 1376 713 106 0 9 chr13 103785841 103785955 -16498357 + (GGGAA)n Simple_repeat Simple_repeat 3 115 0 4 1376 324 0 0 0 chr13 103787657 103787693 -16496619 + (TC)n Simple_repeat Simple_repeat 2 37 0 4 1376 180 0 0 0 chr13 103787693 103787712 -16496600 + (TG)n Simple_repeat Simple_repeat 1 20 0 4 1376 387 0 0 0 chr13 103787712 103787754 -16496558 + (GA)n Simple_repeat Simple_repeat 1 43 0 4 1376 275 322 130 41 chr13 103787754 103787877 -16496435 - RSINE1 SINE B4 -30 135 2 4 1376 304 252 83 83 chr13 103787900 103788008 -16496304 - B3 SINE B2 -3 213 106 4 1376 3506 117 52 8 chr13 103788049 103788834 -16495478 - Lx5 LINE L1 -849 6201 5382 4 1376 4570 154 63 8 chr13 103788835 103789615 -16494697 + Lx5 LINE L1 6212 7034 -16 4 1376 225 0 0 0 chr13 103789615 103789640 -16494672 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 4 1376 386 195 35 47 chr13 103789751 103789837 -16494475 - B3 SINE B2 0 216 132 4 1376 21 0 0 0 chr13 103790000 103790021 -16494291 + AT_rich Low_complexity Low_complexity 1 21 0 4 1376 429 70 0 0 chr13 103792536 103792593 -16491719 + (CATTT)n Simple_repeat Simple_repeat 4 60 0 4 1376 676 286 30 0 chr13 103792669 103792868 -16491444 + B3 SINE B2 8 212 -4 4 1376 595 258 74 44 chr13 103793089 103793292 -16491020 + ID_B1 SINE B4 2 210 -14 4 1376 219 69 0 0 chr13 103793428 103793457 -16490855 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1376 1168 66 0 0 chr13 103793692 103793844 -16490468 + L1_Mus1 LINE L1 6416 6567 0 4 1376 558 238 15 53 chr13 103795233 103795366 -16488946 - B1_Mur1 SINE Alu -19 130 3 4 1376 482 281 125 6 chr13 103795430 103795598 -16488714 - B3A SINE B2 -10 188 1 4 1376 212 72 53 18 chr13 103796178 103796235 -16488077 + (TTTTG)n Simple_repeat Simple_repeat 1 59 0 4 1376 727 179 112 0 chr13 103796282 103796416 -16487896 + B1_Mur1 SINE Alu 1 149 0 4 1376 227 189 38 0 chr13 103796418 103796471 -16487841 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 4 1376 541 261 21 85 chr13 103797208 103797443 -16486869 + L1MC LINE L1 5537 5756 -2126 4 1376 373 307 45 39 chr13 103798487 103798643 -16485669 - MER20 DNA MER1_type -27 192 36 4 1376 687 314 127 17 chr13 103799054 103799674 -16484638 + L1ME1 LINE L1 4561 5234 -912 4 1376 442 282 49 44 chr13 103799757 103799961 -16484351 + L1ME1 LINE L1 5693 5897 -282 4 1376 983 32 0 0 chr13 103800196 103800322 -16483990 - B1_Mus2 SINE Alu 0 147 22 4 1376 3692 9 35 0 chr13 103800322 103800746 -16483566 - MERVL-int LTR ERVL -4179 1306 868 4 1376 3231 114 73 26 chr13 103800922 103801541 -16482771 - RMER6A LTR ERVK 0 756 109 4 1376 848 171 0 21 chr13 103801914 103802057 -16482255 + B1_Mus2 SINE Alu 1 140 -7 4 1376 254 169 11 67 chr13 103802078 103802167 -16482145 + Lx5 LINE L1 6967 7050 0 4 1376 1390 99 11 0 chr13 103802945 103803136 -16481176 + B2_Mm1t SINE B2 1 193 0 4 1376 358 243 239 17 chr13 103803372 103803552 -16480760 - ID_B1 SINE B4 0 224 5 4 1376 351 0 0 0 chr13 103803592 103803631 -16480681 + (TC)n Simple_repeat Simple_repeat 2 40 0 4 1376 270 81 0 0 chr13 103803632 103803669 -16480643 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1376 667 295 63 26 chr13 103803807 103804075 -16480237 + B4A SINE B4 1 278 -14 4 1376 528 138 0 0 chr13 103804078 103804194 -16480118 + (TC)n Simple_repeat Simple_repeat 1 116 0 4 1376 923 200 70 5 chr13 103805686 103805887 -16478425 + B3 SINE B2 2 215 -1 4 1376 977 88 12 12 chr13 103805894 103806055 -16478257 + (GGA)n Simple_repeat Simple_repeat 2 162 0 4 1376 8380 5 0 0 chr13 103806123 103807166 -16477146 - L1Md_A LINE L1 -572 6010 4968 4 1376 5031 4 0 0 chr13 103807166 103807713 -16476599 + L1Md_A LINE L1 6036 6582 0 4 1376 327 287 143 6 chr13 103807772 103807947 -16476365 - MIR SINE MIR -32 230 32 4 1376 209 33 0 32 chr13 103808408 103808439 -16475873 + (CACCC)n Simple_repeat Simple_repeat 4 33 0 4 1377 26 0 0 0 chr13 103811487 103811513 -16472799 + AT_rich Low_complexity Low_complexity 1 26 0 4 1377 22 35 0 0 chr13 103813194 103813223 -16471089 + AT_rich Low_complexity Low_complexity 1 29 0 4 1377 22 35 0 0 chr13 103814099 103814128 -16470184 + AT_rich Low_complexity Low_complexity 1 29 0 4 1377 210 156 0 0 chr13 103816659 103816704 -16467608 + C-rich Low_complexity Low_complexity 1 45 0 4 1377 204 67 0 0 chr13 103818417 103818447 -16465865 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 4 1377 240 234 141 50 chr13 103818486 103818585 -16465727 - PB1D7 SINE Alu 0 120 13 4 1377 342 221 31 39 chr13 103818765 103818892 -16465420 + PB1 SINE Alu 2 127 0 4 1377 189 0 0 0 chr13 103819023 103819044 -16465268 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 1377 209 280 53 11 chr13 103819282 103819376 -16464936 - L2 LINE L2 -1025 2394 2297 4 1377 1063 58 72 0 chr13 103820148 103820286 -16464026 + B1_Mus1 SINE Alu 1 148 0 4 1377 2115 78 17 24 chr13 103820382 103820603 -16463709 + Lx2 LINE L1 6709 6934 -63 4 1377 3348 19 136 0 chr13 103820603 103821021 -16463291 + IAPLTR2_Mm LTR ERVK 1 475 0 4 1377 2115 78 17 24 chr13 103821021 103821090 -16463222 + Lx2 LINE L1 6935 6997 0 4 1377 204 135 0 0 chr13 103821140 103821177 -16463135 + (G)n Simple_repeat Simple_repeat 1 37 0 4 1377 311 305 0 0 chr13 103821239 103821321 -16462991 - MER5B DNA MER1_type -1 177 96 4 1377 790 281 75 29 chr13 103822059 103822337 -16461975 + B4A SINE B4 2 292 0 4 1377 261 180 0 0 chr13 103822356 103822406 -16461906 + (CA)n Simple_repeat Simple_repeat 1 50 0 4 1377 411 122 33 0 chr13 103822693 103822783 -16461529 + CT-rich Low_complexity Low_complexity 2 94 0 4 1377 987 87 6 34 chr13 103822783 103822962 -16461350 + (TTTC)n Simple_repeat Simple_repeat 3 176 0 4 1377 1265 169 0 5 chr13 103823713 103823933 -16460379 + URR1B DNA MER1_type 1 219 -6 4 1377 183 114 0 0 chr13 103825926 103825961 -16458351 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 4 1377 496 259 19 70 chr13 103826141 103826299 -16458013 + B4 SINE B4 104 253 -39 4 1377 1479 37 0 0 chr13 103826266 103826454 -16457858 + B2_Mm1t SINE B2 6 193 0 4 1377 317 22 44 0 chr13 103826469 103826514 -16457798 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 4 1377 252 0 0 0 chr13 103826615 103826643 -16457669 + (CA)n Simple_repeat Simple_repeat 1 28 0 4 1377 233 172 17 33 chr13 103828491 103828551 -16455761 + (TG)n Simple_repeat Simple_repeat 1 59 0 4 1377 742 151 23 6 chr13 103828564 103828737 -16455575 + (TG)n Simple_repeat Simple_repeat 1 176 0 4 1377 389 308 52 46 chr13 103828780 103828933 -16455379 - B3 SINE B2 -13 203 50 4 1377 746 197 21 0 chr13 103829238 103829380 -16454932 + B1_Mur4 SINE Alu 6 150 0 4 1377 189 0 0 0 chr13 103830292 103830313 -16453999 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4 1377 423 52 0 0 chr13 103832307 103832365 -16451947 + (TCTG)n Simple_repeat Simple_repeat 2 59 0 4 1377 249 33 0 0 chr13 103832365 103832395 -16451917 + (CA)n Simple_repeat Simple_repeat 1 30 0 4 1377 223 276 109 2 chr13 103834237 103834363 -16449949 + B1F SINE Alu 13 149 0 4 1377 630 296 26 9 chr13 103835308 103835536 -16448776 - L1MA5 LINE L1 -23 6277 6046 5 1377 610 187 24 5 chr13 103835797 103836002 -16448310 + GA-rich Low_complexity Low_complexity 1 208 0 5 1377 241 285 101 85 chr13 103836317 103836583 -16447729 + RSINE1 SINE B4 27 281 -11 5 1377 985 116 14 0 chr13 103836643 103836781 -16447531 - B1_Mus1 SINE Alu -6 142 3 5 1377 393 277 20 111 chr13 103836908 103836948 -16447364 - B2_Mm2 SINE B2 -1 194 157 5 1377 405 0 0 0 chr13 103836948 103836993 -16447319 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1377 637 252 9 15 chr13 103836993 103837151 -16447161 - B3A SINE B2 -39 156 14 5 1377 319 278 33 0 chr13 103837187 103837277 -16447035 - PB1D10 SINE Alu -1 116 24 5 1377 264 30 0 0 chr13 103837421 103837454 -16446858 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1377 271 346 47 62 chr13 103837740 103837996 -16446316 - L1MC LINE L1 -2102 5780 5529 5 1377 280 220 25 6 chr13 103838007 103838167 -16446145 + (TA)n Simple_repeat Simple_repeat 2 164 0 5 1377 221 241 0 36 chr13 103838331 103838387 -16445925 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 5 1377 457 114 65 0 chr13 103838436 103838559 -16445753 + (TG)n Simple_repeat Simple_repeat 2 132 0 5 1377 539 238 15 31 chr13 103838565 103838695 -16445617 - B4A SINE B4 -84 208 81 5 1377 180 111 0 0 chr13 103838716 103838743 -16445569 + (TG)n Simple_repeat Simple_repeat 1 27 0 5 1377 482 286 131 27 chr13 103838829 103839088 -16445224 - B4 SINE B4 -6 286 1 5 1377 225 250 18 0 chr13 103839088 103839142 -16445170 - B4A SINE B4 -197 95 41 5 1377 495 0 0 0 chr13 103840101 103840156 -16444156 + (CA)n Simple_repeat Simple_repeat 2 56 0 5 1377 591 15 0 0 chr13 103840156 103840223 -16444089 + (GA)n Simple_repeat Simple_repeat 2 69 0 5 1377 744 286 30 0 chr13 103840324 103840523 -16443789 + B3 SINE B2 3 207 -9 5 1377 342 115 0 0 chr13 103840535 103840587 -16443725 + (TATG)n Simple_repeat Simple_repeat 3 54 0 5 1377 217 203 0 115 chr13 103840642 103840720 -16443592 + PB1D10 SINE Alu 42 110 -7 5 1377 220 150 50 0 chr13 103840763 103840803 -16443509 + G-rich Low_complexity Low_complexity 4 45 0 5 1377 1281 269 41 19 chr13 103841443 103841806 -16442506 + MTE2b LTR MaLR 3 416 -3 5 1377 200 360 64 58 chr13 103841893 103842064 -16442248 - MIRb SINE MIR -41 227 56 5 1377 207 0 0 0 chr13 103843924 103843947 -16440365 + (TTA)n Simple_repeat Simple_repeat 2 24 0 5 1377 511 272 57 36 chr13 103845110 103845301 -16439011 - B3A SINE B2 -6 210 12 5 1377 408 251 112 91 chr13 103846885 103847126 -16437186 + MTEa LTR MaLR 3 248 -131 5 1377 497 301 70 35 chr13 103847234 103847434 -16436878 + MTE2a LTR MaLR 123 329 -50 5 1377 231 298 31 41 chr13 103847444 103847542 -16436770 + MTE2a LTR MaLR 283 379 0 5 1377 292 341 50 34 chr13 103847622 103847801 -16436511 + MER63B DNA AcHobo 255 436 0 5 1377 462 36 0 0 chr13 103848432 103848488 -16435824 + (TC)n Simple_repeat Simple_repeat 1 56 0 5 1377 611 146 19 6 chr13 103848488 103848647 -16435665 + (CA)n Simple_repeat Simple_repeat 2 162 0 5 1377 680 159 15 0 chr13 103848857 103848989 -16435323 + GA-rich Low_complexity Low_complexity 4 137 0 5 1377 645 200 16 0 chr13 103849463 103849588 -16434724 + B1_Mur1 SINE Alu 23 149 0 5 1377 252 0 0 0 chr13 103850787 103850815 -16433497 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1377 324 0 0 0 chr13 103851124 103851160 -16433152 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1377 305 271 0 0 chr13 103851160 103851230 -16433082 - ID4 SINE ID -11 72 3 5 1377 306 322 77 96 chr13 103851299 103851604 -16432708 + MLT1A1 LTR MaLR 1 335 -73 5 1377 387 0 0 0 chr13 103851604 103851647 -16432665 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 5 1377 306 204 40 61 chr13 103851647 103851706 -16432606 + MLT1A1 LTR MaLR 336 392 -16 5 1377 393 116 0 0 chr13 103853279 103853348 -16430964 + (CCA)n Simple_repeat Simple_repeat 2 70 0 5 1377 783 151 0 0 chr13 103853851 103853977 -16430335 + B1_Mus2 SINE Alu 10 135 -12 5 1377 612 27 0 0 chr13 103853979 103854053 -16430259 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 1377 289 278 148 0 chr13 103854299 103854468 -16429844 - MTEa LTR MaLR -42 337 144 5 1377 1062 161 26 5 chr13 103854681 103854874 -16429438 + URR1B DNA MER1_type 1 197 -28 5 1377 195 100 0 0 chr13 103858419 103858449 -16425863 + (CA)n Simple_repeat Simple_repeat 2 31 0 5 1377 306 282 118 0 chr13 103858449 103858559 -16425753 - MIR SINE MIR -26 236 114 5 1377 741 157 7 13 chr13 103858804 103858959 -16425353 + (TA)n Simple_repeat Simple_repeat 2 155 0 5 1377 408 88 0 0 chr13 103859001 103859058 -16425254 + (TA)n Simple_repeat Simple_repeat 2 58 0 5 1377 254 308 15 0 chr13 103859132 103859197 -16425115 + tRNA-Ala-GCY_ tRNA tRNA 1 66 -9 5 1377 239 358 12 36 chr13 103859197 103859211 -16425101 + ID4_ SINE ID 7 83 0 5 1377 619 199 85 35 chr13 103859408 103859549 -16424763 + B1_Mur1 SINE Alu 2 149 0 5 1377 331 289 98 8 chr13 103859657 103859779 -16424533 + ORR1D2 LTR MaLR 57 189 -181 5 1377 455 290 80 65 chr13 103859849 103860048 -16424264 + RMER30 DNA MER1_type 1 202 0 5 1377 298 354 10 0 chr13 103860048 103860146 -16424166 + ORR1D2 LTR MaLR 281 379 0 5 1377 297 247 14 0 chr13 103860333 103860406 -16423906 + (CATATA)n Simple_repeat Simple_repeat 4 77 0 5 1377 609 251 52 26 chr13 103861957 103862111 -16422201 + B3A SINE B2 2 157 -41 5 1377 377 109 16 0 chr13 103862111 103862175 -16422137 + (CA)n Simple_repeat Simple_repeat 1 65 0 5 1377 609 251 52 26 chr13 103862175 103862212 -16422100 + B3A SINE B2 158 198 0 5 1377 678 215 0 30 chr13 103862234 103862368 -16421944 + B1_Mur2 SINE Alu 5 134 -15 5 1377 375 23 0 0 chr13 103863233 103863277 -16421035 + (GGGGA)n Simple_repeat Simple_repeat 5 48 0 5 1377 315 0 0 0 chr13 103863429 103863464 -16420848 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1377 214 316 51 0 chr13 103864322 103864401 -16419911 + MIRb SINE MIR 103 185 -83 5 1377 239 190 0 17 chr13 103865828 103865887 -16418425 + (TA)n Simple_repeat Simple_repeat 2 59 0 5 1377 180 0 0 0 chr13 103865887 103865907 -16418405 + (CAGA)n Simple_repeat Simple_repeat 4 23 0 5 1377 4210 83 2 2 chr13 103866146 103866698 -16417614 - L1_Mus2 LINE L1 -1 6565 6014 5 1377 301 261 14 0 chr13 103866757 103866826 -16417486 + tRNA-Ala-GCA tRNA tRNA 4 73 -2 5 1377 563 250 7 33 chr13 103867171 103867324 -16416988 + B1F SINE Alu 1 149 0 5 1377 276 176 0 0 chr13 103868479 103868547 -16415765 + GA-rich Low_complexity Low_complexity 1 68 0 5 1377 234 81 0 0 chr13 103869242 103869279 -16415033 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 5 1377 1050 122 0 0 chr13 103872873 103873053 -16411259 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1377 342 45 0 0 chr13 103874586 103874630 -16409682 + (CA)n Simple_repeat Simple_repeat 2 45 0 5 1377 242 342 32 58 chr13 103875276 103875431 -16408881 + MLT1A LTR MaLR 1 151 -223 5 1377 1306 77 71 11 chr13 103876643 103876663 -16407649 - B2_Mm2 SINE B2 0 195 163 5 1377 186 43 0 0 chr13 103876663 103876686 -16407626 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1377 1306 77 71 11 chr13 103876686 103876849 -16407463 - B2_Mm2 SINE B2 -33 162 1 5 1377 755 254 23 0 chr13 103876902 103877079 -16407233 - B3A SINE B2 -17 181 1 5 1377 183 156 0 0 chr13 103878739 103878771 -16405541 + (CAT)n Simple_repeat Simple_repeat 2 33 0 5 1377 387 0 0 0 chr13 103879882 103879925 -16404387 + (CA)n Simple_repeat Simple_repeat 1 43 0 5 1377 861 181 134 15 chr13 103881090 103881292 -16403020 - URR1A DNA MER1_type 0 226 1 5 1377 25 0 0 0 chr13 103881806 103881831 -16402481 + AT_rich Low_complexity Low_complexity 1 25 0 5 1377 715 201 21 7 chr13 103881989 103882134 -16402178 + B1_Mur2 SINE Alu 2 148 -1 5 1377 282 29 0 0 chr13 103882585 103882620 -16401692 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 5 1377 844 170 7 21 chr13 103882620 103882764 -16401548 - B1_Mus2 SINE Alu -5 142 1 5 1377 202 62 0 59 chr13 103886027 103886061 -16398251 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 5 1377 180 152 0 0 chr13 103887327 103887360 -16396952 + A-rich Low_complexity Low_complexity 1 33 0 5 1377 315 0 0 0 chr13 103888527 103888562 -16395750 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1377 1001 127 60 11 chr13 103889081 103889117 -16395195 - B2_Mm2 SINE B2 -3 192 150 5 1377 507 73 0 0 chr13 103889117 103889185 -16395127 + (CA)n Simple_repeat Simple_repeat 2 69 0 5 1377 1001 127 60 11 chr13 103889185 103889331 -16394981 - B2_Mm2 SINE B2 -46 149 3 5 1377 258 297 127 0 chr13 103889392 103889510 -16394802 - RSINE1 SINE B4 -31 134 2 5 1377 996 154 0 0 chr13 103889521 103889696 -16394616 + (TA)n Simple_repeat Simple_repeat 2 176 0 5 1377 209 162 43 29 chr13 103890981 103891028 -16393284 + (TTTG)n Simple_repeat Simple_repeat 4 53 0 5 1377 1216 34 0 27 chr13 103891028 103891178 -16393134 - B1_Mus2 SINE Alu 0 147 2 5 1377 1370 79 26 5 chr13 103891183 103891373 -16392939 - B2_Mm2 SINE B2 0 195 2 5 1377 209 162 43 29 chr13 103891373 103891389 -16392923 + (TTTG)n Simple_repeat Simple_repeat 3 18 0 5 1377 216 304 60 11 chr13 103892249 103892365 -16391947 - MIRc SINE MIR -115 153 34 5 1377 258 105 0 0 chr13 103892579 103892617 -16391695 + (AGGGGG)n Simple_repeat Simple_repeat 6 43 0 5 1377 192 40 0 0 chr13 103894412 103894437 -16389875 + (TCTG)n Simple_repeat Simple_repeat 4 28 0 5 1377 252 274 58 23 chr13 103894497 103894583 -16389729 - B2_Mm2 SINE B2 -106 89 1 5 1377 198 0 0 0 chr13 103894591 103894613 -16389699 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1377 306 0 0 0 chr13 103894714 103894748 -16389564 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1377 555 272 0 137 chr13 103894793 103894976 -16389336 + RSINE1 SINE B4 8 165 0 5 1377 525 267 0 0 chr13 103894988 103895153 -16389159 + (CA)n Simple_repeat Simple_repeat 1 165 0 5 1377 21 0 0 0 chr13 103896427 103896448 -16387864 + AT_rich Low_complexity Low_complexity 1 21 0 5 1377 252 255 40 20 chr13 103897443 103897543 -16386769 + MER5B DNA MER1_type 45 146 -32 5 1377 8366 33 0 0 chr13 103897857 103898824 -16385488 + L1Md_T LINE L1 5616 6582 0 5 1377 180 0 0 0 chr13 103898844 103898864 -16385448 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1377 249 33 0 0 chr13 103900952 103900982 -16383330 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1377 438 273 33 37 chr13 103901318 103901531 -16382781 + B4A SINE B4 1 284 -8 6 1377 513 110 0 0 chr13 103901554 103901636 -16382676 + (TC)n Simple_repeat Simple_repeat 2 83 0 6 1377 180 0 0 0 chr13 103901710 103901730 -16382582 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 6 1377 620 209 0 30 chr13 103902729 103902862 -16381450 - ID_B1 SINE B4 -9 215 87 6 1377 291 54 0 0 chr13 103903044 103903081 -16381231 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 6 1377 216 304 25 12 chr13 103903081 103903161 -16381151 + ID4_ SINE ID 2 82 -1 6 1377 243 0 0 0 chr13 103903379 103903406 -16380906 + (TG)n Simple_repeat Simple_repeat 1 27 0 6 1377 450 266 37 0 chr13 103903421 103903530 -16380782 - RSINE1 SINE B4 -44 121 9 6 1377 555 16 0 0 chr13 103904459 103904523 -16379789 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 1377 283 345 104 94 chr13 103905102 103905400 -16378912 + MLT1J1 LTR MaLR 17 317 -127 6 1377 516 222 122 20 chr13 103905794 103905941 -16378371 + B3A SINE B2 1 162 -36 6 1377 378 61 0 0 chr13 103905944 103905993 -16378319 + (TGGA)n Simple_repeat Simple_repeat 1 49 0 6 1377 204 111 0 0 chr13 103906015 103906051 -16378261 + (TC)n Simple_repeat Simple_repeat 1 36 0 6 1377 399 41 0 0 chr13 103906051 103906100 -16378212 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1377 443 267 0 0 chr13 103907044 103907184 -16377128 + Lx9 LINE L1 5748 5920 -1553 6 1377 508 120 53 55 chr13 103907396 103908019 -16376293 + GA-rich Low_complexity Low_complexity 1 621 0 6 1377 1680 338 52 41 chr13 103908024 103908249 -16376063 + Lx9 LINE L1 5956 6194 -1279 6 1377 248 111 22 0 chr13 103908249 103908294 -16376018 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1377 3283 266 49 45 chr13 103908294 103909169 -16375143 + Lx9 LINE L1 6195 7210 -434 6 1377 614 163 159 88 chr13 103909169 103909351 -16374961 + B2_Mm2 SINE B2 1 195 0 6 1377 3283 264 49 45 chr13 103909351 103909591 -16374721 + Lx9 LINE L1 7211 7457 -187 6 1377 333 0 0 0 chr13 103909598 103909635 -16374677 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1377 24 53 0 0 chr13 103909739 103909777 -16374535 + AT_rich Low_complexity Low_complexity 1 38 0 6 1377 189 0 0 0 chr13 103909777 103909798 -16374514 + (TG)n Simple_repeat Simple_repeat 2 22 0 6 1377 225 268 28 0 chr13 103910162 103910233 -16374079 + ID2 SINE ID 1 73 -10 6 1377 348 254 69 31 chr13 103910363 103910493 -16373819 - ID_B1 SINE B4 -3 221 87 6 1377 330 80 0 0 chr13 103910638 103910688 -16373624 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1377 650 181 52 8 chr13 103913410 103913544 -16370768 + B1_Mur2 SINE Alu 10 149 0 6 1377 297 289 40 0 chr13 103914404 103914480 -16369832 - ID4_ SINE ID -2 81 3 6 1377 608 300 139 50 chr13 103914644 103915262 -16369050 + L1M5 LINE L1 4130 4802 -1344 6 1377 573 293 20 20 chr13 103915728 103915930 -16368382 + RLTR42-int LTR ERVK 1199 1400 -4122 6 1377 341 367 68 0 chr13 103917853 103918000 -16366312 - RSINE1 SINE B4 -6 159 3 6 1377 883 259 14 9 chr13 103918723 103918937 -16365375 - B3 SINE B2 0 216 2 6 1377 185 326 10 73 chr13 103919033 103919129 -16365183 - MIR SINE MIR -141 121 32 6 1377 387 0 0 0 chr13 103919148 103919191 -16365121 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 1377 411 73 0 0 chr13 103919191 103919245 -16365067 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1377 394 309 0 77 chr13 103919246 103919428 -16364884 - B4A SINE B4 -42 250 83 6 1377 757 269 37 100 chr13 103919560 103919940 -16364372 - ORR1E LTR MaLR 0 359 4 6 1377 438 20 0 0 chr13 103920032 103920083 -16364229 + (TG)n Simple_repeat Simple_repeat 2 52 0 6 1377 595 148 22 15 chr13 103920454 103920591 -16363721 + GA-rich Low_complexity Low_complexity 2 139 0 6 1377 668 138 25 33 chr13 103921445 103921565 -16362747 + PB1D9 SINE Alu 2 120 0 6 1377 458 88 52 39 chr13 103921565 103921718 -16362594 + A-rich Low_complexity Low_complexity 1 155 0 6 1377 369 241 0 0 chr13 103921736 103921815 -16362497 + B3A SINE B2 2 80 -118 6 1377 234 0 0 0 chr13 103921861 103921887 -16362425 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 6 1377 207 125 0 0 chr13 103922929 103922969 -16361343 + (T)n Simple_repeat Simple_repeat 1 40 0 6 1377 182 288 15 15 chr13 103924026 103924093 -16360219 - MIRb SINE MIR -27 241 175 6 1377 370 62 0 0 chr13 103924178 103924226 -16360086 - L1_Mus2 LINE L1 -283 6283 6236 6 1377 2314 64 7 3 chr13 103924226 103924523 -16359789 + L1_Mus2 LINE L1 6269 6566 0 6 1377 231 329 114 36 chr13 103924956 103925123 -16359189 + MER2 DNA MER2_type 89 268 -77 6 1377 2398 113 0 0 chr13 103927122 103927449 -16356863 + ORR1A2 LTR MaLR 1 327 0 6 1377 257 296 12 24 chr13 103928446 103928529 -16355783 - ID4_ SINE ID 0 83 2 6 1377 556 269 56 22 chr13 103928641 103928820 -16355492 + B4A SINE B4 108 292 0 6 1377 360 64 0 0 chr13 103928839 103928886 -16355426 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1377 342 224 0 0 chr13 103929043 103929120 -16355192 - ID2 SINE ID -60 92 16 6 1377 404 300 137 18 chr13 103929326 103929611 -16354701 + L1MC4 LINE L1 7311 7629 -413 6 1377 214 255 20 0 chr13 103929837 103929888 -16354424 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1377 756 205 0 0 chr13 103930989 103931245 -16353067 + (CA)n Simple_repeat Simple_repeat 1 256 0 6 1377 195 114 0 0 chr13 103931771 103931806 -16352506 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 6 1377 313 273 72 50 chr13 103932328 103932467 -16351845 - RSINE1 SINE B4 -23 142 1 6 1377 216 0 0 0 chr13 103933632 103933656 -16350656 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1377 223 392 14 0 chr13 103933928 103934002 -16350310 - ID2 SINE ID -8 75 1 6 1377 24 0 0 0 chr13 103934002 103934026 -16350286 + AT_rich Low_complexity Low_complexity 1 24 0 6 1377 707 226 18 30 chr13 103934032 103934196 -16350116 + RSINE1 SINE B4 2 163 -2 6 1377 402 21 0 0 chr13 103936727 103936774 -16347538 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1377 465 19 0 0 chr13 103936810 103936864 -16347448 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1377 1086 285 114 11 chr13 103937312 103937787 -16346525 + L1MB3 LINE L1 5660 6183 0 6 1377 189 94 0 0 chr13 103937824 103937856 -16346456 + (A)n Simple_repeat Simple_repeat 1 32 0 6 1377 28 29 0 0 chr13 103939492 103939527 -16344785 + AT_rich Low_complexity Low_complexity 1 35 0 6 1378 186 43 0 0 chr13 103941363 103941386 -16342926 + (C)n Simple_repeat Simple_repeat 1 23 0 6 1378 324 0 0 0 chr13 103942383 103942419 -16341893 + (GA)n Simple_repeat Simple_repeat 2 37 0 6 1378 184 354 0 15 chr13 103943499 103943565 -16340747 - L4 LINE RTE -218 1811 1747 6 1378 237 340 45 36 chr13 103943898 103944008 -16340304 - MLT1A1 LTR MaLR -33 375 265 6 1378 369 224 0 0 chr13 103944248 103944373 -16339939 + CT-rich Low_complexity Low_complexity 2 126 0 6 1378 353 318 90 45 chr13 103945257 103945412 -16338900 - RSINE1 SINE B4 -2 163 2 6 1378 1420 78 5 25 chr13 103946432 103946629 -16337683 + B2_Mm1t SINE B2 1 193 0 6 1378 507 73 0 0 chr13 103946631 103946699 -16337613 + (GGA)n Simple_repeat Simple_repeat 3 70 0 6 1378 324 0 0 0 chr13 103946700 103946736 -16337576 + (CAT)n Simple_repeat Simple_repeat 2 37 0 6 1378 333 0 0 0 chr13 103947382 103947419 -16336893 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 1378 1869 239 94 17 chr13 103947885 103948261 -16336051 + L1_Rod LINE L1 737 1119 -6489 6 1378 630 26 0 0 chr13 103948261 103948337 -16335975 + (CA)n Simple_repeat Simple_repeat 1 76 0 6 1378 1869 187 122 10 chr13 103948337 103948843 -16335469 + L1_Rod LINE L1 1120 1668 -2246 6 1378 206 180 177 16 chr13 103948970 103949032 -16335280 - L2 LINE L2 -1365 2054 1983 6 1378 2401 220 70 22 chr13 103949206 103949851 -16334461 - L1_Rod LINE L1 -2943 2904 2229 6 1378 3604 76 11 4 chr13 103951026 103951504 -16332808 - L1_Mus3 LINE L1 -3 6635 6155 6 1378 587 146 228 0 chr13 103951504 103951662 -16332650 - L1_Rod LINE L1 -3598 2249 2056 6 1378 348 253 79 40 chr13 103951670 103951703 -16332609 + CYRA11_Mm Unknown Y-chromosome 133 172 -445 6 1378 750 146 14 7 chr13 103951703 103951848 -16332464 - URR1A DNA MER1_type 0 226 81 6 1378 922 220 185 7 chr13 103951879 103952181 -16332131 - L1_Rod LINE L1 -3820 2027 1672 6 1378 1731 144 22 31 chr13 103952181 103952503 -16331809 + ORR1A2 LTR MaLR 1 319 -8 6 1378 9052 147 67 23 chr13 103952507 103954224 -16330088 + ORR1A2-int LTR MaLR 1 1792 0 6 1378 375 138 0 0 chr13 103954224 103954289 -16330023 + ORR1A2 LTR MaLR 1 65 -262 6 1378 218 231 39 0 chr13 103954570 103954622 -16329690 + ID4 SINE ID 2 55 -28 6 1378 255 344 30 30 chr13 103956225 103956423 -16327889 - L1M5 LINE L1 -354 5819 5622 6 1378 234 286 152 0 chr13 103956704 103956809 -16327503 + MIR SINE MIR 113 233 -29 6 1378 257 324 14 0 chr13 103956987 103957058 -16327254 - ID_B1 SINE B4 -29 195 124 6 1378 644 194 24 0 chr13 103957562 103957686 -16326626 + B1F SINE Alu 22 148 -1 6 1378 372 83 57 13 chr13 103957694 103957772 -16326540 - B2_Mm2 SINE B2 -6 189 106 6 1378 434 250 9 28 chr13 103958537 103958644 -16325668 - PB1D10 SINE Alu -6 111 7 6 1378 414 57 0 0 chr13 103958660 103958713 -16325599 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1378 437 345 61 43 chr13 103958776 103959055 -16325257 - B4A SINE B4 0 292 9 6 1378 28 0 0 0 chr13 103959224 103959252 -16325060 + AT_rich Low_complexity Low_complexity 1 28 0 6 1378 27 49 0 0 chr13 103959533 103959574 -16324738 + AT_rich Low_complexity Low_complexity 1 41 0 6 1378 333 190 38 12 chr13 103959700 103959780 -16324532 - ID4 SINE ID 0 83 2 6 1378 238 217 50 0 chr13 103960176 103960236 -16324076 + L1M5 LINE L1 5321 5383 -1061 6 1378 402 268 77 23 chr13 103960654 103960784 -16323528 + L1M5 LINE L1 5461 5597 -567 6 1378 333 102 0 0 chr13 103960929 103960988 -16323324 + (TG)n Simple_repeat Simple_repeat 1 59 0 6 1378 387 280 0 0 chr13 103961010 103961128 -16323184 + (TG)n Simple_repeat Simple_repeat 1 118 0 6 1378 926 258 85 11 chr13 103961987 103962258 -16322054 + B4 SINE B4 2 292 0 6 1378 234 0 0 0 chr13 103963631 103963657 -16320655 + (TGG)n Simple_repeat Simple_repeat 1 26 0 6 1378 208 128 0 49 chr13 103964538 103964579 -16319733 + T-rich Low_complexity Low_complexity 2 40 0 6 1378 21 0 0 0 chr13 103966907 103966928 -16317384 + AT_rich Low_complexity Low_complexity 1 21 0 6 1378 187 31 30 30 chr13 103967902 103967935 -16316377 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 7 1378 344 250 99 27 chr13 103968642 103968753 -16315559 - PB1D7 SINE Alu -1 119 1 7 1378 251 279 6 0 chr13 103969081 103969246 -16315066 + (CA)n Simple_repeat Simple_repeat 2 167 0 7 1378 342 61 0 0 chr13 103969301 103969350 -16314962 + (TCTCTG)n Simple_repeat Simple_repeat 2 50 0 7 1378 300 27 0 0 chr13 103969352 103969389 -16314923 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1378 384 252 104 22 chr13 103969650 103969784 -16314528 + B1F SINE Alu 1 145 -4 7 1378 275 258 30 0 chr13 103970040 103970106 -16314206 - PB1D10 SINE Alu -49 68 1 7 1378 366 23 0 0 chr13 103972028 103972071 -16312241 + (TG)n Simple_repeat Simple_repeat 1 43 0 7 1378 601 261 12 19 chr13 103972072 103972232 -16312080 - B3A SINE B2 -37 161 3 7 1378 306 0 0 0 chr13 103972457 103972491 -16311821 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 7 1378 960 278 50 62 chr13 103973127 103973511 -16310801 + MTE2a LTR MaLR 1 379 0 7 1378 34 42 0 0 chr13 103973542 103973590 -16310722 + AT_rich Low_complexity Low_complexity 1 48 0 7 1378 414 0 0 0 chr13 103974615 103974661 -16309651 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1378 471 299 80 28 chr13 103975146 103975397 -16308915 + L1MA5 LINE L1 5993 6256 -44 7 1378 832 48 24 8 chr13 103975493 103975620 -16308692 + L1Md_F3 LINE L1 6453 6581 -3 7 1378 250 226 0 0 chr13 103976062 103976115 -16308197 + MER58D DNA MER1_type 326 378 -8 7 1378 387 0 0 0 chr13 103976412 103976455 -16307857 + (GTTTG)n Simple_repeat Simple_repeat 2 44 0 7 1378 1142 114 111 69 chr13 103977268 103977484 -16306828 - URR1A DNA MER1_type -1 225 1 7 1378 366 307 93 12 chr13 103978751 103979008 -16305304 + B4 SINE B4 3 280 -12 7 1378 651 323 82 54 chr13 103980079 103980635 -16303677 + MLT1F LTR MaLR 17 567 -2 7 1378 447 244 3 0 chr13 103980918 103981225 -16303087 + (CA)n Simple_repeat Simple_repeat 1 308 0 7 1378 449 240 157 17 chr13 103982948 103983126 -16301186 - MER3 DNA MER1_type -5 204 2 7 1378 2712 158 106 15 chr13 103983637 103984164 -16300148 - RMER15 LTR ERVL 0 575 1 7 1378 323 267 29 10 chr13 103984343 103984445 -16299867 + ID_B1 SINE B4 121 224 0 7 1378 274 210 222 0 chr13 103986294 103986375 -16297937 - PB1D10 SINE Alu 0 117 19 7 1378 180 0 0 0 chr13 103986656 103986676 -16297636 + (TCCC)n Simple_repeat Simple_repeat 1 20 0 7 1378 321 234 116 11 chr13 103987080 103987175 -16297137 - PB1D10 SINE Alu -1 116 12 7 1378 513 300 24 48 chr13 103987201 103987369 -16296943 + RSINE1 SINE B4 2 165 0 7 1378 500 215 18 108 chr13 103990745 103990912 -16293400 + Lx6 LINE L1 7281 7432 -28 7 1378 270 193 0 0 chr13 103990933 103990990 -16293322 + GA-rich Low_complexity Low_complexity 4 60 0 7 1378 276 30 0 0 chr13 103991451 103991484 -16292828 + (CA)n Simple_repeat Simple_repeat 1 33 0 7 1378 2017 237 50 30 chr13 103991637 103992141 -16292171 - Lx9 LINE L1 -771 6873 6360 7 1378 387 41 0 0 chr13 103992154 103992203 -16292109 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1378 629 102 9 0 chr13 103992206 103992314 -16291998 + (GA)n Simple_repeat Simple_repeat 1 109 0 7 1378 495 297 64 78 chr13 103994034 103994330 -16289982 + B4A SINE B4 1 292 0 7 1378 721 279 11 0 chr13 103994714 103994897 -16289415 + ID_B1 SINE B4 1 185 -39 7 1378 380 267 19 68 chr13 103995080 103995241 -16289071 + RMER15 LTR ERVL 359 511 -64 7 1378 324 0 0 0 chr13 103995243 103995279 -16289033 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1378 445 247 11 134 chr13 103995674 103995861 -16288451 - L2a LINE L2 0 3426 3263 7 1378 233 327 10 19 chr13 103996207 103996310 -16288002 - L2a LINE L2 -600 2819 2718 7 1378 419 345 75 105 chr13 103996578 103997122 -16287190 + MLT2B3 LTR ERVL 27 554 0 7 1378 690 350 107 10 chr13 103997179 103997676 -16286636 - L2a LINE L2 -722 2697 2153 7 1378 837 186 234 5 chr13 103997874 103998058 -16286254 - URR1A DNA MER1_type 0 226 1 7 1378 287 323 0 0 chr13 103998448 103998541 -16285771 + Lx9 LINE L1 6863 6955 -689 7 1378 648 100 27 18 chr13 103998543 103998655 -16285657 + URR1B DNA MER1_type 95 207 -18 7 1378 1615 297 8 27 chr13 103998694 103999219 -16285093 + Lx9 LINE L1 6971 7485 -159 7 1378 466 287 107 12 chr13 103999422 103999591 -16284721 + B4 SINE B4 7 191 -101 7 1378 245 242 88 11 chr13 103999707 103999812 -16284500 + L1M5 LINE L1 3196 3308 -2838 7 1378 593 249 135 35 chr13 104000108 104000337 -16283975 + Lx8 LINE L1 7220 7471 -2 1 1378 622 321 59 40 chr13 104000576 104000930 -16283382 + MTD LTR MaLR 18 378 -41 2 1378 336 297 26 18 chr13 104001174 104001287 -16283025 + PB1D10 SINE Alu 2 115 -2 3 1378 1052 281 139 30 chr13 104002881 104003659 -16280653 - Charlie2b DNA MER1_type -109 2673 1811 4 1378 32 0 0 0 chr13 104003669 104003701 -16280611 + AT_rich Low_complexity Low_complexity 1 32 0 5 1378 285 312 0 12 chr13 104003790 104003871 -16280441 + PB1D10 SINE Alu 15 94 -23 6 1378 223 304 10 42 chr13 104003871 104003886 -16280426 + ID_B1 SINE B4 96 188 -36 7 1378 5329 147 15 38 chr13 104004004 104004932 -16279380 + RMER13B LTR ERVK 2 908 0 8 1378 288 0 0 0 chr13 104004938 104004970 -16279342 + (CA)n Simple_repeat Simple_repeat 1 32 0 9 1378 368 52 0 33 chr13 104004973 104005033 -16279279 + (CAGAGA)n Simple_repeat Simple_repeat 2 59 0 1 1378 492 248 0 52 chr13 104005121 104005257 -16279055 + Lx8 LINE L1 7146 7274 -199 1 1378 274 306 0 46 chr13 104006543 104006673 -16277639 + GA-rich Low_complexity Low_complexity 2 125 0 1 1378 274 336 118 34 chr13 104006976 104007238 -16277074 + B4A SINE B4 5 288 -4 1 1378 209 33 33 0 chr13 104007250 104007280 -16277032 + (TC)n Simple_repeat Simple_repeat 2 32 0 1 1378 306 0 0 0 chr13 104007282 104007316 -16276996 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1378 186 160 0 0 chr13 104008291 104008341 -16275971 + A-rich Low_complexity Low_complexity 1 50 0 1 1378 375 23 0 0 chr13 104008419 104008463 -16275849 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 1 1378 781 238 47 53 chr13 104008804 104009146 -16275166 + RLTR15 LTR ERVK 1 340 -19 1 1378 240 0 75 0 chr13 104009305 104009345 -16274967 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1378 493 341 18 31 chr13 104009544 104009771 -16274541 + MLT1D LTR MaLR 274 497 -8 2 1378 268 263 26 0 chr13 104010066 104010142 -16274170 + (CATATA)n Simple_repeat Simple_repeat 3 80 0 2 1378 25 31 0 0 chr13 104010450 104010482 -16273830 + AT_rich Low_complexity Low_complexity 1 32 0 2 1378 270 0 0 0 chr13 104010706 104010736 -16273576 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1378 334 300 0 0 chr13 104012586 104012675 -16271637 - ID4_ SINE ID -58 94 6 2 1378 572 247 44 12 chr13 104012878 104013038 -16271274 + ORR1E LTR MaLR 9 173 -186 2 1378 1611 182 213 25 chr13 104013063 104013542 -16270770 + RMER4B LTR ERVK 17 585 0 2 1378 516 32 0 0 chr13 104013651 104013713 -16270599 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 1378 800 252 69 91 chr13 104013806 104014181 -16270131 + MLT1B LTR MaLR 19 385 -5 2 1378 243 0 0 0 chr13 104014735 104014762 -16269550 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2 1378 324 194 10 98 chr13 104014888 104015082 -16269230 + RMER17C LTR ERVK 97 273 -137 3 1378 488 16 16 0 chr13 104015082 104015143 -16269169 + (GAAA)n Simple_repeat Simple_repeat 3 64 0 3 1378 3522 131 29 32 chr13 104016861 104017555 -16266757 - RMER17A LTR ERVK -59 692 1 3 1378 212 31 62 0 chr13 104019183 104019215 -16265097 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1378 200 286 105 42 chr13 104019337 104019432 -16264880 - MIRc SINE MIR -151 117 17 3 1378 1209 36 0 0 chr13 104019506 104019646 -16264666 + B1_Mus1 SINE Alu 3 142 -6 3 1378 200 59 29 0 chr13 104019648 104019682 -16264630 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 3 1378 189 0 0 0 chr13 104019946 104019967 -16264345 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1378 578 267 52 0 chr13 104020452 104020587 -16263725 + B1F SINE Alu 1 142 -7 3 1378 255 125 0 0 chr13 104022679 104022719 -16261593 + (TTTTC)n Simple_repeat Simple_repeat 4 43 0 3 1378 630 297 177 19 chr13 104022986 104023467 -16260845 - Charlie1a DNA MER1_type -84 1371 815 4 1378 182 37 0 36 chr13 104023505 104023533 -16260779 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 4 1378 717 336 67 32 chr13 104023581 104024043 -16260269 - Charlie1a DNA MER1_type -961 494 17 4 1378 456 104 0 0 chr13 104024734 104024801 -16259511 + (TGGA)n Simple_repeat Simple_repeat 4 70 0 4 1378 1656 169 95 49 chr13 104025561 104025928 -16258384 + ORR1C2 LTR MaLR 1 384 0 4 1378 2239 144 0 0 chr13 104026852 104027178 -16257134 + ORR1A3 LTR MaLR 1 326 0 4 1378 1477 30 14 87 chr13 104027727 104027946 -16256366 - L1Md_F3 LINE L1 0 6584 6382 4 1378 279 0 0 0 chr13 104029309 104029340 -16254972 + (TATG)n Simple_repeat Simple_repeat 2 32 0 4 1378 1152 227 37 82 chr13 104029383 104029786 -16254526 - Lx9 LINE L1 -5 7639 7255 4 1378 243 0 0 0 chr13 104030827 104030854 -16253458 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1378 723 211 0 30 chr13 104030872 104031004 -16253308 - RSINE1 SINE B4 -36 129 2 4 1378 1301 249 121 10 chr13 104031045 104031442 -16252870 - Lx8 LINE L1 -10 7463 7023 5 1378 3320 262 24 7 chr13 104031450 104032272 -16252040 + Lx8 LINE L1 6186 7021 -452 5 1378 240 333 145 23 chr13 104033049 104033270 -16251042 - MIR SINE MIR -2 260 13 5 1378 1166 107 209 0 chr13 104033461 104033648 -16250664 + URR1A DNA MER1_type 1 226 0 5 1378 295 311 42 0 chr13 104034039 104034158 -16250154 - PB1 SINE Alu -3 124 1 5 1378 459 279 109 71 chr13 104035005 104035345 -16248967 + MLT1A LTR MaLR 19 371 -3 5 1378 1189 85 0 6 chr13 104036274 104036452 -16247860 + BGLII_B LTR ERVK 1 177 -264 5 1378 644 110 10 0 chr13 104036447 104036547 -16247765 + BGLII_B LTR ERVK 341 441 0 5 1378 650 254 151 18 chr13 104039909 104040301 -16244011 + L1MA4 LINE L1 5270 5740 -140 5 1378 310 155 0 17 chr13 104040333 104040392 -16243920 + B1_Mur1 SINE Alu 66 123 -26 5 1378 444 37 0 0 chr13 104040403 104040457 -16243855 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1378 315 0 0 0 chr13 104040457 104040491 -16243821 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1378 416 189 78 43 chr13 104040492 104040608 -16243704 + L1MA4 LINE L1 5802 5921 -379 5 1378 280 339 36 0 chr13 104040845 104040957 -16243355 + RMER15 LTR ERVL 414 529 -46 6 1378 284 248 131 28 chr13 104041265 104041410 -16242902 - L1MA8 LINE L1 -66 6225 6066 6 1378 282 301 38 11 chr13 104041441 104041580 -16242732 - L1MA8 LINE L1 -321 5991 5843 6 1378 717 154 15 23 chr13 104041953 104042086 -16242226 - B1_Mur3 SINE Alu -2 147 16 6 1378 306 0 0 0 chr13 104043290 104043324 -16240988 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1378 207 88 0 29 chr13 104045342 104045377 -16238935 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 6 1378 183 162 0 0 chr13 104045978 104046015 -16238297 + (TA)n Simple_repeat Simple_repeat 1 37 0 6 1378 188 243 39 51 chr13 104048394 104048472 -16235840 + L2b LINE L2 3062 3138 -237 6 1378 341 22 22 0 chr13 104048707 104048753 -16235559 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1378 378 0 0 0 chr13 104048753 104048794 -16235518 + (GA)n Simple_repeat Simple_repeat 2 43 0 6 1378 21 0 0 0 chr13 104049408 104049429 -16234883 + AT_rich Low_complexity Low_complexity 1 21 0 6 1378 257 263 26 9 chr13 104049431 104049546 -16234766 + (TG)n Simple_repeat Simple_repeat 1 117 0 7 1378 889 234 28 9 chr13 104049724 104049935 -16234377 + B3 SINE B2 2 216 0 7 1378 202 333 72 0 chr13 104050029 104050140 -16234172 - MIR SINE MIR -10 252 134 7 1378 3562 136 79 8 chr13 104050166 104050797 -16233515 + RLTR17 LTR ERVK 1 676 -16 7 1378 435 242 16 48 chr13 104050949 104051075 -16233237 - MTEa LTR MaLR -249 130 9 7 1378 203 184 0 0 chr13 104051759 104051797 -16232515 + A-rich Low_complexity Low_complexity 1 38 0 7 1378 24 0 0 0 chr13 104052120 104052144 -16232168 + AT_rich Low_complexity Low_complexity 1 24 0 7 1378 239 306 64 105 chr13 104052426 104052645 -16231667 - MER2 DNA MER2_type -135 210 1 7 1378 348 24 0 0 chr13 104053669 104053710 -16230602 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 1378 239 79 26 0 chr13 104053912 104053950 -16230362 + (TTTC)n Simple_repeat Simple_repeat 4 42 0 7 1378 873 268 14 0 chr13 104054308 104054521 -16229791 - B3 SINE B2 0 216 1 8 1378 324 188 0 0 chr13 104054609 104054678 -16229634 + (TA)n Simple_repeat Simple_repeat 1 69 0 8 1378 536 95 12 0 chr13 104054677 104054761 -16229551 + (GGAA)n Simple_repeat Simple_repeat 4 88 0 8 1378 202 345 79 26 chr13 104055168 104055320 -16228992 - MIR SINE MIR -86 176 17 8 1378 513 254 0 17 chr13 104055559 104055679 -16228633 + B1F SINE Alu 15 132 -17 8 1378 351 0 0 0 chr13 104056088 104056127 -16228185 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 8 1378 278 164 81 14 chr13 104056157 104056231 -16228081 - L1MEg LINE L1 -5005 1079 1001 8 1378 441 81 0 0 chr13 104056265 104056327 -16227985 + (TGGA)n Simple_repeat Simple_repeat 3 64 0 8 1378 471 304 69 6 chr13 104056708 104056867 -16227445 + MTEa LTR MaLR 16 184 -195 8 1378 828 247 11 11 chr13 104056868 104057052 -16227260 + B3A SINE B2 1 184 -14 8 1378 239 72 0 23 chr13 104057069 104057112 -16227200 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 9 1378 1130 52 0 0 chr13 104057112 104057248 -16227064 - B1_Mus2 SINE Alu -11 136 1 9 1378 400 268 133 27 chr13 104057264 104057452 -16226860 + MTEa LTR MaLR 168 375 -4 8 1378 271 304 108 58 chr13 104057736 104058165 -16226147 + L2b LINE L2 2652 3095 -280 9 1378 360 304 29 0 chr13 104058470 104058572 -16225740 + PB1D7 SINE Alu 8 112 -8 9 1378 3995 196 34 7 chr13 104059584 104060417 -16223895 + Lx9 LINE L1 6782 7636 -8 9 1378 334 297 19 19 chr13 104060543 104060646 -16223666 + PB1D10 SINE Alu 15 117 0 9 1378 23 0 0 0 chr13 104064999 104065022 -16219290 + AT_rich Low_complexity Low_complexity 1 23 0 9 1378 511 87 42 62 chr13 104065928 104066250 -16218062 + GA-rich Low_complexity Low_complexity 1 315 0 9 1378 399 0 0 137 chr13 104066250 104066425 -16217887 + (GGGAGA)n Simple_repeat Simple_repeat 4 154 0 9 1378 279 0 0 0 chr13 104066427 104066458 -16217854 + (GGGAA)n Simple_repeat Simple_repeat 5 35 0 9 1378 320 0 25 0 chr13 104066585 104066625 -16217687 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1 1378 515 258 199 44 chr13 104066843 104067094 -16217218 - B4 SINE B4 -2 290 1 1 1378 1817 144 14 0 chr13 104067322 104067614 -16216698 - ORR1B1 LTR MaLR 0 394 99 1 1378 458 270 113 31 chr13 104067766 104067988 -16216324 + RMER20B LTR ERVK 125 364 -263 1 1378 641 117 0 0 chr13 104068163 104068266 -16216046 - ORR1B1 LTR MaLR -289 105 3 1 1378 2152 127 37 8 chr13 104068268 104068619 -16215693 + ORR1B2 LTR MaLR 7 367 0 1 1378 316 273 136 0 chr13 104069002 104069090 -16215222 + B4 SINE B4 138 237 -55 1 1378 297 259 11 23 chr13 104069879 104069966 -16214346 + PB1D7 SINE Alu 1 86 -34 1 1378 225 0 0 0 chr13 104070180 104070205 -16214107 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 1 1378 812 195 6 0 chr13 104070299 104070473 -16213839 + GA-rich Low_complexity Low_complexity 3 177 0 1 1378 948 254 30 70 chr13 104070994 104071114 -16213198 - MER2 DNA MER2_type -23 322 220 1 172 284 186 70 14 chr13 104071114 104071185 -16213127 - ID4 SINE ID -7 76 2 1 1379 948 254 30 70 chr13 104071185 104071394 -16212918 - MER2 DNA MER2_type -126 219 6 1 1379 1680 147 10 3 chr13 104071984 104072277 -16212035 - ORR1C1 LTR MaLR 0 378 84 1 1379 273 306 157 37 chr13 104072326 104072543 -16211769 - Lx8 LINE L1 0 7473 7231 1 1379 265 346 37 43 chr13 104073062 104073225 -16211087 + MLT1H LTR MaLR 38 199 -350 1 1379 411 332 121 4 chr13 104073267 104073524 -16210788 + MER63D DNA AcHobo 1 287 -774 1 1379 29 28 0 0 chr13 104074681 104074717 -16209595 + AT_rich Low_complexity Low_complexity 1 36 0 1 1379 216 97 0 0 chr13 104075403 104075434 -16208878 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1379 2905 174 159 0 chr13 104076447 104077044 -16207268 + L1_Mur1 LINE L1 4898 5589 -297 1 1379 7911 60 1 2 chr13 104077044 104078029 -16206283 + L1Md_F2 LINE L1 5587 6570 -12 1 1379 1007 176 0 25 chr13 104078053 104078251 -16206061 + B3 SINE B2 14 206 -10 1 1379 281 271 82 0 chr13 104079609 104079694 -16204618 - B4A SINE B4 -198 94 3 1 1379 1214 282 112 74 chr13 104079880 104080687 -16203625 - Lx8 LINE L1 -40 7433 6597 1 1379 314 331 113 0 chr13 104080686 104080828 -16203484 + Lx8 LINE L1 7082 7239 -234 1 1379 285 309 41 0 chr13 104080870 104080967 -16203345 - Lx8 LINE L1 -908 6565 6465 1 1379 492 324 124 19 chr13 104081033 104081291 -16203021 + B4A SINE B4 2 286 -6 1 1379 225 0 0 0 chr13 104081609 104081634 -16202678 + (TA)n Simple_repeat Simple_repeat 2 26 0 1 1379 198 0 0 0 chr13 104082246 104082268 -16202044 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1 1379 397 295 0 0 chr13 104082268 104082373 -16201939 - PB1D10 SINE Alu -11 106 2 1 1379 1561 131 4 0 chr13 104082533 104082770 -16201542 - MTC LTR MaLR 0 421 184 1 1379 2080 77 27 3 chr13 104082770 104083071 -16201241 + IAPLTR2b LTR ERVK 1 308 -19 1 1379 818 178 86 0 chr13 104083092 104083153 -16201159 - MTC LTR MaLR -231 190 126 1 1379 216 0 0 0 chr13 104083153 104083177 -16201135 + (TTTG)n Simple_repeat Simple_repeat 4 27 0 1 1379 818 178 86 0 chr13 104083177 104083289 -16201023 - MTC LTR MaLR -296 125 4 1 1379 180 111 0 0 chr13 104083712 104083739 -16200573 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 1 1379 342 171 0 0 chr13 104084364 104084434 -16199878 + (TG)n Simple_repeat Simple_repeat 1 70 0 1 1379 433 320 26 26 chr13 104084436 104084587 -16199725 - RSINE1 SINE B4 -1 164 14 1 1379 198 209 0 0 chr13 104084949 104084992 -16199320 + (CAT)n Simple_repeat Simple_repeat 3 45 0 1 1379 250 296 18 18 chr13 104085613 104085723 -16198589 - L1MC5 LINE L1 -202 7759 7650 1 1379 628 221 40 73 chr13 104086066 104086206 -16198106 + RSINE1 SINE B4 8 142 -23 1 1379 336 24 0 0 chr13 104086206 104086247 -16198065 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1379 1036 276 93 43 chr13 104086326 104086953 -16197359 - L1MC5 LINE L1 -726 7235 6637 1 1379 661 296 90 40 chr13 104086941 104087253 -16197059 + L1MA9 LINE L1 5200 5538 -774 1 1379 183 100 0 0 chr13 104087253 104087283 -16197029 + (GAATG)n Simple_repeat Simple_repeat 3 32 0 1 1379 661 295 98 32 chr13 104087283 104087467 -16196845 + L1MA9 LINE L1 5539 5745 -567 1 1379 451 297 167 5 chr13 104087627 104087813 -16196499 + ID_B1 SINE B4 3 218 -6 1 1379 247 244 69 85 chr13 104087823 104087953 -16196359 + L1MA9 LINE L1 5815 5942 -370 1 1379 243 146 0 0 chr13 104087953 104087994 -16196318 + (GGA)n Simple_repeat Simple_repeat 2 42 0 1 1379 1039 73 0 13 chr13 104089039 104089191 -16195121 + (TTTC)n Simple_repeat Simple_repeat 4 153 0 1 1379 369 0 0 0 chr13 104089241 104089282 -16195030 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 1379 345 47 0 0 chr13 104089715 104089758 -16194554 + (CA)n Simple_repeat Simple_repeat 2 44 0 1 1379 549 237 57 0 chr13 104090189 104090366 -16193946 + Charlie4a DNA MER1_type 190 376 -132 1 1379 232 239 44 33 chr13 104090367 104090458 -16193854 - L1M3 LINE L1 -2510 3630 3539 1 1379 287 25 25 0 chr13 104090536 104090576 -16193736 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1 1379 270 185 0 18 chr13 104090585 104090640 -16193672 - ID4_ SINE ID -28 55 2 1 1379 225 0 0 0 chr13 104091033 104091058 -16193254 + (A)n Simple_repeat Simple_repeat 1 25 0 1 1379 26 0 0 0 chr13 104091829 104091855 -16192457 + AT_rich Low_complexity Low_complexity 1 26 0 1 1379 24 0 0 0 chr13 104092511 104092535 -16191777 + AT_rich Low_complexity Low_complexity 1 24 0 1 1379 23 0 0 0 chr13 104093481 104093504 -16190808 + AT_rich Low_complexity Low_complexity 1 23 0 1 1379 384 22 0 0 chr13 104093745 104093790 -16190522 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1379 379 339 115 0 chr13 104094364 104094547 -16189765 + Tigger5 DNA MER2_type 39 242 -2164 1 1379 570 274 34 48 chr13 104094826 104095033 -16189279 - MLT1C LTR MaLR -262 205 2 1 1379 227 333 23 0 chr13 104095231 104095318 -16188994 + MIRb SINE MIR 65 153 -115 1 1379 1493 39 28 0 chr13 104096562 104096743 -16187569 - B2_Mm1a SINE B2 -6 187 2 1 1379 1317 143 9 18 chr13 104097444 104097671 -16186641 - URR1B DNA MER1_type 0 225 1 1 1379 1011 283 53 58 chr13 104098139 104098748 -16185564 - L1MA8 LINE L1 -148 6008 5438 1 1379 519 284 98 71 chr13 104098904 104099200 -16185112 + MTEa LTR MaLR 5 308 -71 1 1379 536 220 53 13 chr13 104100064 104100216 -16184096 - L1MA8 LINE L1 -987 5153 4996 1 1379 1281 281 112 70 chr13 104101172 104101815 -16182497 - L1MA9 LINE L1 -2 6332 5643 1 1379 234 0 0 0 chr13 104101815 104101841 -16182471 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1379 1281 282 145 45 chr13 104101841 104102186 -16182126 - L1MA9 LINE L1 -692 5642 5220 1 1379 1191 284 150 53 chr13 104102625 104103725 -16180587 - L1MA9 LINE L1 -965 5175 3969 1 1379 203 88 29 0 chr13 104103741 104103775 -16180537 + (TTCC)n Simple_repeat Simple_repeat 2 36 0 1 1379 636 188 7 59 chr13 104103775 104103928 -16180384 - B1_Mur4 SINE Alu -1 149 5 1 1379 335 247 149 72 chr13 104103940 104104214 -16180098 - L1MA9 LINE L1 -2166 3977 3686 1 1379 214 132 53 0 chr13 104104228 104104266 -16180046 + MIRm SINE MIR 227 266 -10 1 1379 360 0 0 0 chr13 104105796 104105836 -16178476 + (GAAA)n Simple_repeat Simple_repeat 4 43 0 1 1379 369 0 0 0 chr13 104105836 104105876 -16178436 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 1 1379 831 306 33 0 chr13 104105998 104106269 -16178043 + B4A SINE B4 11 290 -2 1 1379 202 161 16 16 chr13 104106278 104106314 -16177998 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1379 372 43 0 0 chr13 104106314 104106360 -16177952 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1379 202 161 16 16 chr13 104106360 104106386 -16177926 + (CA)n Simple_repeat Simple_repeat 2 27 0 1 1379 324 0 0 0 chr13 104106424 104106460 -16177852 + (TC)n Simple_repeat Simple_repeat 1 36 0 1 1379 525 302 79 19 chr13 104106493 104106709 -16177603 + B4 SINE B4 42 270 -22 1 1379 194 0 39 0 chr13 104106710 104106736 -16177576 + (CA)n Simple_repeat Simple_repeat 2 28 0 1 1379 277 254 0 0 chr13 104107434 104107501 -16176811 + C-rich Low_complexity Low_complexity 1 67 0 1 1379 227 315 87 35 chr13 104108184 104108299 -16176013 + MIRb SINE MIR 109 229 -39 1 1379 554 309 12 18 chr13 104108859 104109024 -16175288 - RSINE1 SINE B4 0 165 2 1 1379 192 97 0 0 chr13 104109495 104109526 -16174786 + (G)n Simple_repeat Simple_repeat 1 31 0 1 1379 430 199 0 75 chr13 104110572 104111086 -16173226 + C-rich Low_complexity Low_complexity 1 475 0 1 1379 326 326 6 22 chr13 104111185 104111367 -16172945 + CT-rich Low_complexity Low_complexity 1 179 0 1 1379 370 263 70 11 chr13 104111797 104111919 -16172393 + B3A SINE B2 1 150 -66 1 1379 293 100 0 20 chr13 104111925 104111976 -16172336 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1379 2250 124 54 3 chr13 104113340 104113729 -16170583 - MTC LTR MaLR -8 413 5 1 1379 366 23 0 0 chr13 104114559 104114602 -16169710 + (TGAA)n Simple_repeat Simple_repeat 4 46 0 1 1379 1338 245 22 80 chr13 104115168 104115621 -16168691 - Lx8 LINE L1 -2 7471 7045 1 1379 291 54 0 0 chr13 104115774 104115811 -16168501 + (ATTG)n Simple_repeat Simple_repeat 2 38 0 1 1379 189 0 0 0 chr13 104116034 104116055 -16168257 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1379 396 277 57 47 chr13 104119458 104119651 -16164661 + Charlie23a DNA MER1_type 93 287 -52 1 1379 270 0 0 0 chr13 104119952 104119982 -16164330 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1379 864 159 29 6 chr13 104120331 104120502 -16163810 - URR1B DNA MER1_type -3 222 48 1 1379 246 312 31 0 chr13 104120729 104120793 -16163519 + ID4 SINE ID 12 77 -6 1 1379 715 237 20 50 chr13 104121296 104121496 -16162816 + B3A SINE B2 2 195 -3 1 1379 355 299 37 0 chr13 104121729 104121836 -16162476 - MIRc SINE MIR -113 155 45 1 1379 26 0 0 0 chr13 104124061 104124087 -16160225 + GC_rich Low_complexity Low_complexity 1 26 0 1 1379 187 211 86 27 chr13 104125053 104125162 -16159150 + MIR SINE MIR 108 231 -37 1 1379 332 204 80 44 chr13 104125604 104125717 -16158595 - L2c LINE L2 -5 3382 3266 1 1379 212 277 133 9 chr13 104126475 104126588 -16157724 - MIR SINE MIR -121 141 15 1 1379 311 300 135 69 chr13 104126702 104126922 -16157390 - MIR SINE MIR -7 255 26 1 1379 297 0 0 0 chr13 104127583 104127616 -16156696 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1379 381 62 30 15 chr13 104128251 104128317 -16155995 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1379 1805 150 37 34 chr13 104129201 104129553 -16154759 - ORR1B1 LTR MaLR 0 394 42 2 1379 310 294 64 0 chr13 104129716 104129825 -16154487 - MER5B DNA MER1_type 0 178 63 2 1379 510 304 85 19 chr13 104129845 104130103 -16154209 + L1MC4a LINE L1 6803 7077 -805 2 1379 522 320 95 6 chr13 104130121 104130300 -16154012 + ID_B1 SINE B4 30 224 0 2 1379 737 273 181 2 chr13 104130428 104130847 -16153465 + L1MC4a LINE L1 7205 7698 -184 2 1379 257 342 70 6 chr13 104131327 104131483 -16152829 - MLT1N2 LTR MaLR -378 184 19 2 1379 227 357 44 19 chr13 104131612 104131772 -16152540 - MIRb SINE MIR -1 267 104 2 1379 572 276 13 0 chr13 104132164 104132320 -16151992 - L1MB1 LINE L1 -72 6096 5939 2 1379 409 362 78 16 chr13 104134434 104134692 -16149620 + MLT1H1 LTR MaLR 25 298 -257 2 1379 1747 246 151 24 chr13 104136287 104136871 -16147441 + RMER1C Other Other 681 1338 -4 2 1379 246 32 0 0 chr13 104137750 104137781 -16146531 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 2 1379 226 308 39 0 chr13 104137877 104137955 -16146357 + ID4 SINE ID 3 83 0 2 1379 651 164 0 0 chr13 104137963 104138091 -16146221 + (CA)n Simple_repeat Simple_repeat 1 128 0 2 1379 244 217 17 0 chr13 104138325 104138385 -16145927 + (TCTCTG)n Simple_repeat Simple_repeat 2 62 0 2 1379 394 218 147 39 chr13 104138387 104138516 -16145796 - RSINE1 SINE B4 -1 164 22 2 1379 231 302 33 41 chr13 104139177 104139298 -16145014 + L1MC5 LINE L1 7766 7885 -76 2 1379 379 35 35 0 chr13 104139417 104139474 -16144838 + (GA)n Simple_repeat Simple_repeat 1 59 0 2 1379 244 248 61 74 chr13 104139505 104139653 -16144659 + L1ME4a LINE L1 5805 5950 -174 2 1379 642 60 0 0 chr13 104139718 104139801 -16144511 + (TA)n Simple_repeat Simple_repeat 2 84 0 2 1379 219 69 0 0 chr13 104140722 104140751 -16143561 + (CAT)n Simple_repeat Simple_repeat 1 29 0 2 1379 426 237 11 17 chr13 104141034 104141210 -16143102 + (TATG)n Simple_repeat Simple_repeat 4 178 0 2 1379 580 330 40 74 chr13 104142349 104142616 -16141696 + B4A SINE B4 1 259 -33 2 1379 5217 72 0 9 chr13 104142616 104143300 -16141012 + L1Md_F2 LINE L1 5905 6582 0 2 1379 580 330 40 74 chr13 104143300 104143330 -16140982 + B4A SINE B4 260 288 -4 2 1379 211 279 29 0 chr13 104143334 104143402 -16140910 + (CA)n Simple_repeat Simple_repeat 1 70 0 2 1379 772 242 15 26 chr13 104143445 104143640 -16140672 + B3A SINE B2 5 197 -1 2 1379 576 211 18 130 chr13 104143652 104143875 -16140437 + B3A SINE B2 1 198 0 2 1379 2009 170 31 3 chr13 104144133 104144482 -16139830 - MTC LTR MaLR 0 421 63 2 1379 457 293 76 22 chr13 104144922 104145107 -16139205 - MER117 DNA MER1_type -2 195 1 2 1379 348 24 0 0 chr13 104145388 104145429 -16138883 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1379 39 38 0 0 chr13 104145537 104145590 -16138722 + AT_rich Low_complexity Low_complexity 1 53 0 2 1379 416 139 13 0 chr13 104146124 104146203 -16138109 + GA-rich Low_complexity Low_complexity 2 81 0 2 1379 1225 34 0 20 chr13 104149370 104149520 -16134792 + B1_Mm SINE Alu 1 147 0 2 1379 444 176 0 0 chr13 104149562 104149693 -16134619 + GA-rich Low_complexity Low_complexity 2 132 0 2 1379 274 295 121 79 chr13 104149863 104150128 -16134184 - B4 SINE B4 -16 276 1 2 1379 238 250 0 45 chr13 104150373 104150440 -16133872 + GA-rich Low_complexity Low_complexity 5 68 0 2 1379 226 157 53 67 chr13 104151601 104151676 -16132636 - L1MB8 LINE L1 -11 6167 6094 2 1379 227 239 15 0 chr13 104151677 104151744 -16132568 + (TA)n Simple_repeat Simple_repeat 1 68 0 2 1379 258 32 0 0 chr13 104151743 104151774 -16132538 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1379 941 310 107 25 chr13 104151790 104152349 -16131963 - L1MB7 LINE L1 -205 5979 5375 2 1379 4090 103 36 10 chr13 104152462 104153048 -16131264 - MT2B LTR ERVL 0 601 1 2 1379 310 303 20 0 chr13 104153335 104153434 -16130878 - L2 LINE L2 -1012 2407 2307 2 1379 1966 202 100 4 chr13 104153541 104154019 -16130293 + RLTR28 LTR ERVL 1 524 0 2 1379 461 275 99 58 chr13 104154114 104154407 -16129905 + MER33 DNA MER1_type 20 324 0 2 1379 258 253 21 62 chr13 104155393 104155490 -16128822 + MIR SINE MIR 58 150 -58 2 1379 321 327 124 20 chr13 104155490 104155643 -16128669 - MER5A DNA MER1_type -2 187 19 2 1379 180 125 0 0 chr13 104155770 104155802 -16128510 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2 1379 36 0 0 0 chr13 104156494 104156530 -16127782 + AT_rich Low_complexity Low_complexity 1 36 0 2 1379 626 242 47 0 chr13 104156610 104156759 -16127553 + Lx6 LINE L1 5893 6048 -1412 2 1379 364 307 193 0 chr13 104157043 104157307 -16127005 + L1ME4a LINE L1 5571 5885 -239 2 1379 251 250 75 98 chr13 104157541 104157674 -16126638 + LTR33C LTR ERVL 237 366 -263 2 1379 355 325 43 37 chr13 104157778 104157941 -16126371 - MLT1D LTR MaLR -73 432 269 2 1379 256 258 16 0 chr13 104157982 104158044 -16126268 - MLT1D LTR MaLR -308 197 135 2 1379 363 190 44 0 chr13 104158217 104158354 -16125958 + (TA)n Simple_repeat Simple_repeat 1 143 0 2 1379 224 158 53 0 chr13 104158449 104158525 -16125787 + (TA)n Simple_repeat Simple_repeat 1 80 0 2 1379 331 187 128 18 chr13 104159853 104159962 -16124350 + Lx8 LINE L1 7353 7473 0 2 1379 2359 65 3 6 chr13 104160253 104160576 -16123736 - ORR1A2 LTR MaLR 0 327 6 2 1379 608 0 14 0 chr13 104161072 104161144 -16123168 + (TC)n Simple_repeat Simple_repeat 1 73 0 2 1379 345 342 3 16 chr13 104161224 104161426 -16122886 + GA-rich Low_complexity Low_complexity 1 199 0 2 1379 234 156 0 0 chr13 104161924 104161969 -16122343 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1379 756 194 0 0 chr13 104162313 104162607 -16121705 + (CA)n Simple_repeat Simple_repeat 1 294 0 2 1379 784 291 14 171 chr13 104163020 104163459 -16120853 - MTE2a LTR MaLR -5 374 5 2 1379 606 156 0 0 chr13 104164423 104164558 -16119754 + CT-rich Low_complexity Low_complexity 1 135 0 2 1379 180 267 16 48 chr13 104164626 104164689 -16119623 + L2c LINE L2 3279 3339 -48 2 1379 803 277 53 38 chr13 104165291 104165530 -16118782 + B4A SINE B4 1 249 -43 2 1379 3218 63 2 2 chr13 104165530 104165926 -16118386 - MTA_Mm LTR MaLR 0 396 1 2 1379 803 277 53 38 chr13 104165926 104165949 -16118363 + B4A SINE B4 250 267 -25 2 1379 387 0 0 0 chr13 104165959 104166002 -16118310 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1379 459 264 101 0 chr13 104167511 104167640 -16116672 - B1F SINE Alu -2 147 6 2 1379 201 39 0 0 chr13 104168048 104168074 -16116238 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1379 1457 229 84 10 chr13 104168080 104168498 -16115814 + RCHARR1 DNA MER1_type 487 935 -39 2 1379 219 214 0 45 chr13 104170050 104170138 -16114174 + GA-rich Low_complexity Low_complexity 1 84 0 2 1379 180 0 0 0 chr13 104171583 104171603 -16112709 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1379 300 276 2 0 chr13 104172178 104172267 -16112045 + ID4 SINE ID 14 103 -49 2 1379 4626 58 24 0 chr13 104172734 104173319 -16110993 + L1Md_F2 LINE L1 5983 6581 -1 2 1379 526 243 139 61 chr13 104173362 104173542 -16110770 + B3A SINE B2 5 198 0 2 1379 213 132 0 0 chr13 104173780 104173818 -16110494 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 2 1379 458 271 75 0 chr13 104173818 104173951 -16110361 - B1_Mur1 SINE Alu -5 144 2 2 1379 247 287 64 80 chr13 104173992 104174117 -16110195 - MIR SINE MIR -141 127 5 2 1379 2316 188 22 7 chr13 104174473 104174886 -16109426 - MTD LTR MaLR 0 419 1 2 1379 369 259 0 12 chr13 104175287 104175373 -16108939 - RSINE1 SINE B4 -2 163 79 2 1379 1718 285 126 46 chr13 104175445 104175927 -16108385 + L1MB8 LINE L1 4122 4621 -1525 2 1379 354 98 0 0 chr13 104175927 104175978 -16108334 + (TTA)n Simple_repeat Simple_repeat 1 51 0 2 1379 1718 285 126 46 chr13 104175978 104176682 -16107630 + L1MB8 LINE L1 4622 5403 -743 2 1379 478 264 166 23 chr13 104176688 104176961 -16107351 + L1MB8 LINE L1 5776 6099 -85 2 1379 398 250 0 0 chr13 104177700 104177776 -16106536 + B1_Mur1 SINE Alu 49 124 -25 2 1379 267 31 0 0 chr13 104177801 104177833 -16106479 + (GGA)n Simple_repeat Simple_repeat 2 33 0 2 1379 321 322 48 32 chr13 104177845 104178034 -16106278 + MIRb SINE MIR 71 262 -6 2 1379 460 263 28 70 chr13 104178297 104178440 -16105872 - B4A SINE B4 -83 209 73 2 1379 895 308 52 34 chr13 104179224 104179631 -16104681 - BGLII_B LTR ERVK -27 414 1 2 1379 180 0 0 0 chr13 104179763 104179783 -16104529 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2 1379 487 207 103 0 chr13 104179943 104180059 -16104253 + B4 SINE B4 83 210 -82 2 1379 234 70 0 0 chr13 104180431 104180474 -16103838 + Lx LINE L1 6612 6654 0 2 1379 386 101 9 66 chr13 104180540 104180646 -16103666 + GA-rich Low_complexity Low_complexity 4 103 0 2 1379 3374 18 48 0 chr13 104180646 104181038 -16103274 - IAPLTR2a LTR ERVK 0 411 1 2 1379 746 31 0 20 chr13 104181038 104181136 -16103176 + (GGAGAA)n Simple_repeat Simple_repeat 2 97 0 2 1379 331 187 42 52 chr13 104181653 104181749 -16102563 + MLT1H2 LTR MaLR 80 174 -315 2 1379 267 244 70 0 chr13 104181930 104182016 -16102296 + MLT1H2 LTR MaLR 458 549 0 2 1379 449 256 153 32 chr13 104182454 104182644 -16101668 - B3 SINE B2 0 216 4 2 1379 993 266 144 22 chr13 104183646 104184007 -16100305 + Lx8 LINE L1 6976 7380 -93 2 1379 655 186 112 41 chr13 104184034 104184230 -16100082 + B3 SINE B2 3 212 -4 2 1379 304 289 126 0 chr13 104184498 104184633 -16099679 + MER5A1 DNA MER1_type 1 152 -14 2 1379 219 347 13 0 chr13 104184679 104184754 -16099558 - MER5B DNA MER1_type -21 157 82 2 1379 643 302 135 84 chr13 104184873 104185347 -16098965 - MLT1F2 LTR MaLR -32 528 31 2 1379 247 259 11 34 chr13 104185595 104185683 -16098629 + MLT1A1 LTR MaLR 318 403 -5 2 1379 444 37 0 0 chr13 104185897 104185951 -16098361 + (GA)n Simple_repeat Simple_repeat 1 54 0 2 1379 273 331 48 7 chr13 104185968 104186114 -16098198 + L1MC3 LINE L1 1332 1483 -4917 3 1379 666 44 0 0 chr13 104186281 104186371 -16097941 + 5S rRNA rRNA 1 90 -31 3 1379 370 288 158 47 chr13 104186537 104186888 -16097424 + L1MC3 LINE L1 3799 4188 -2131 3 1379 246 156 0 0 chr13 104187034 104187098 -16097214 + (TA)n Simple_repeat Simple_repeat 2 65 0 3 1379 295 314 21 42 chr13 104187708 104187901 -16096411 + L1MC3 LINE L1 4476 4664 -1655 3 1379 490 244 8 32 chr13 104187902 104188025 -16096287 + RSINE1 SINE B4 1 120 -45 3 1379 796 304 108 36 chr13 104188095 104188870 -16095442 + L1MC3 LINE L1 4659 5477 -842 3 1379 724 277 99 44 chr13 104188915 104189394 -16094918 + L1MC3 LINE L1 5539 6069 -1889 3 1379 338 267 11 0 chr13 104189803 104189893 -16094419 + B4A SINE B4 202 292 0 3 1379 303 85 16 78 chr13 104189933 104189997 -16094315 + B1_Mus2 SINE Alu 86 145 -2 3 1379 272 345 18 0 chr13 104190010 104190123 -16094189 + L1MC3 LINE L1 6132 6246 -106 3 1379 183 304 21 21 chr13 104190173 104190267 -16094045 + MER5B DNA MER1_type 84 177 -1 3 1379 550 308 83 69 chr13 104190303 104190798 -16093514 + MLT1F2 LTR MaLR 59 560 0 3 1379 38761 15 4 7 chr13 104190823 104196429 -16087883 + L1Md_A LINE L1 1 5586 -297 3 1379 8902 18 0 0 chr13 104196429 104197425 -16086887 + L1Md_A LINE L1 5587 6582 0 3 1379 968 256 89 38 chr13 104197478 104197794 -16086518 + Lx8 LINE L1 7140 7471 -2 3 1379 723 216 69 25 chr13 104197819 104198023 -16086289 + ID_B1 SINE B4 5 217 -7 3 1379 712 239 0 7 chr13 104198333 104198476 -16085836 + RSINE1 SINE B4 2 143 -22 3 1379 375 221 18 30 chr13 104198793 104198914 -16085398 + PB1D10 SINE Alu 5 115 -34 3 1379 351 323 37 41 chr13 104198914 104199159 -16085153 + L3b LINE CR1 57 300 -182 3 1379 314 252 62 39 chr13 104199833 104199961 -16084351 + MER5A DNA MER1_type 1 131 -58 3 1379 228 150 0 0 chr13 104201053 104201093 -16083219 + MER33 DNA MER1_type 6 45 -279 3 1379 22 0 0 0 chr13 104201358 104201380 -16082932 + AT_rich Low_complexity Low_complexity 1 22 0 3 1379 524 252 92 0 chr13 104201633 104201764 -16082548 - RSINE1 SINE B4 -21 144 2 3 1379 232 176 0 56 chr13 104201885 104201939 -16082373 - MamGypLTR1c LTR Gypsy -751 52 2 3 1380 270 0 0 0 chr13 104202700 104202730 -16081582 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1380 338 319 56 76 chr13 104203425 104203727 -16080585 + MamRep1161 DNA TcMar 139 434 -523 3 1380 856 302 52 0 chr13 104204833 104205085 -16079227 + MER2 DNA MER2_type 1 265 -80 3 1380 2324 82 21 62 chr13 104205815 104206153 -16078159 - ORR1A3 LTR MaLR -2 324 1 3 1380 679 201 145 0 chr13 104206552 104206711 -16077601 + Lx8 LINE L1 7148 7329 -144 3 1380 423 0 0 0 chr13 104206715 104206762 -16077550 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1380 327 65 0 0 chr13 104206873 104206919 -16077393 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1380 387 0 0 0 chr13 104206919 104206961 -16077351 + (GA)n Simple_repeat Simple_repeat 1 43 0 3 1380 4100 157 90 10 chr13 104206965 104207818 -16076494 + RMER19B LTR ERVK 55 896 -6 3 1380 309 51 0 0 chr13 104207996 104208035 -16076277 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1380 309 297 8 33 chr13 104208036 104208158 -16076154 + Lx8 LINE L1 7353 7471 -2 3 1380 1013 188 0 11 chr13 104208254 104208437 -16075875 + B3A SINE B2 2 182 -16 3 1380 21 0 0 0 chr13 104208496 104208517 -16075795 + AT_rich Low_complexity Low_complexity 1 21 0 3 1380 640 267 12 0 chr13 104208981 104209142 -16075170 + B3A SINE B2 2 164 -34 3 1380 482 103 0 13 chr13 104209142 104209221 -16075091 + (CA)n Simple_repeat Simple_repeat 1 78 0 3 1380 565 249 28 39 chr13 104209221 104209239 -16075073 + B3 SINE B2 164 179 -37 3 1380 346 287 82 53 chr13 104210156 104210399 -16073913 + MLT1D LTR MaLR 86 335 -170 3 1380 534 215 34 8 chr13 104210461 104210597 -16073715 + B1F SINE Alu 1 139 -10 3 1380 392 244 0 0 chr13 104210613 104210695 -16073617 + ID4_ SINE ID 2 83 0 3 1380 510 46 0 0 chr13 104210732 104210797 -16073515 + (TC)n Simple_repeat Simple_repeat 2 66 0 3 1380 894 276 40 15 chr13 104210890 104211162 -16073150 - 7SK RNA RNA -52 279 1 3 1380 309 274 17 50 chr13 104211348 104211467 -16072845 + GA-rich Low_complexity Low_complexity 4 118 0 3 1380 1040 150 54 45 chr13 104212762 104212986 -16071326 - URR1A DNA MER1_type 0 226 1 3 1380 240 344 65 5 chr13 104217432 104217616 -16066696 + L1MEg LINE L1 1468 1662 -4422 3 1380 353 174 10 0 chr13 104217797 104217895 -16066417 + CT-rich Low_complexity Low_complexity 2 100 0 3 1380 387 0 0 0 chr13 104217897 104217940 -16066372 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1380 236 338 79 48 chr13 104217941 104218106 -16066206 + MLT1G1 LTR MaLR 1 170 -409 3 1380 226 279 0 0 chr13 104218507 104218568 -16065744 + MLT1G1 LTR MaLR 495 555 0 3 1380 832 299 99 27 chr13 104219012 104219386 -16064926 + L1MCa LINE L1 271 671 -5837 3 1380 924 173 4 0 chr13 104220396 104220678 -16063634 + (TG)n Simple_repeat Simple_repeat 1 283 0 3 1380 28 0 0 0 chr13 104222388 104222416 -16061896 + AT_rich Low_complexity Low_complexity 1 28 0 3 1380 1554 198 239 44 chr13 104223638 104224141 -16060171 - MT2B LTR ERVL 0 601 1 3 1380 205 363 26 9 chr13 104224141 104224255 -16060057 - MIRb SINE MIR -72 196 81 3 1380 360 371 79 9 chr13 104224333 104224548 -16059764 - MLT1J2 LTR MaLR -15 433 204 3 1380 189 107 0 0 chr13 104224567 104224595 -16059717 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 3 1380 324 336 70 0 chr13 104224597 104224725 -16059587 - ID_B1 SINE B4 -2 222 86 3 1380 331 303 111 89 chr13 104225352 104225825 -16058487 - MLT1H2 LTR MaLR 0 555 65 3 1380 1035 112 6 17 chr13 104226659 104226840 -16057472 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 3 1380 336 102 0 0 chr13 104227055 104227104 -16057208 + (TG)n Simple_repeat Simple_repeat 1 49 0 3 1380 1526 258 78 30 chr13 104227356 104227831 -16056481 + ERVL-B4-int LTR ERVL 4784 5281 -433 3 1380 257 269 0 0 chr13 104227843 104227895 -16056417 + B1F1 SINE Alu 5 56 -93 3 1380 180 0 0 0 chr13 104227901 104227921 -16056391 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1380 201 154 0 0 chr13 104228274 104228313 -16055999 + A-rich Low_complexity Low_complexity 1 39 0 3 1380 729 279 105 51 chr13 104228483 104228872 -16055440 + MLT2D LTR ERVL 5 414 0 3 1380 251 211 115 0 chr13 104229053 104229105 -16055207 + RSINE1 SINE B4 1 58 -107 3 1380 228 288 29 29 chr13 104229455 104229591 -16054721 + GA-rich Low_complexity Low_complexity 2 137 0 3 1380 770 256 33 7 chr13 104229873 104230064 -16054248 + B3A SINE B2 1 184 -11 3 1380 311 44 22 0 chr13 104230065 104230110 -16054202 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1380 461 187 168 0 chr13 104230110 104230217 -16054095 + B1_Mus1 SINE Alu 24 148 0 3 1380 183 139 0 0 chr13 104230217 104230253 -16054059 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1380 838 214 80 20 chr13 104230325 104230525 -16053787 + B3 SINE B2 2 213 -3 3 1380 28 29 0 0 chr13 104230632 104230667 -16053645 + AT_rich Low_complexity Low_complexity 1 35 0 3 1380 325 343 142 0 chr13 104230833 104231002 -16053310 - MER58A DNA MER1_type -31 193 1 3 1380 311 323 87 66 chr13 104231060 104231392 -16052920 + L1MEg LINE L1 1266 1604 -4638 3 1380 1235 54 0 0 chr13 104231768 104231915 -16052397 + B1_Mm SINE Alu 1 147 0 3 1380 257 65 0 61 chr13 104231915 104231964 -16052348 + (A)n Simple_repeat Simple_repeat 1 46 0 3 1380 239 325 51 35 chr13 104232062 104232221 -16052091 - ORR1E LTR MaLR -15 404 200 3 1380 668 240 90 45 chr13 104232238 104232482 -16051830 + Lx8 LINE L1 6922 7176 -297 3 1380 3243 27 58 18 chr13 104232822 104233203 -16051109 - MTA_Mm LTR MaLR 0 396 1 3 1380 590 26 13 0 chr13 104233205 104233281 -16051031 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 3 1380 242 309 36 0 chr13 104233353 104233437 -16050875 - ORR1E LTR MaLR -254 105 19 3 1380 204 250 0 15 chr13 104233594 104233659 -16050653 + A-rich Low_complexity Low_complexity 6 69 0 3 1380 309 344 72 57 chr13 104233752 104233946 -16050366 + L1MEg LINE L1 2316 2512 -3634 3 1380 195 325 98 24 chr13 104234383 104234465 -16049847 + L2b LINE L2 3256 3343 -32 3 1380 222 37 0 0 chr13 104234542 104234569 -16049743 + (CAAG)n Simple_repeat Simple_repeat 2 28 0 3 1380 23 0 0 0 chr13 104235141 104235164 -16049148 + AT_rich Low_complexity Low_complexity 1 23 0 3 1380 2578 117 70 15 chr13 104236601 104237001 -16047311 + Lx LINE L1 6226 6647 -7 3 1380 207 0 0 0 chr13 104237028 104237051 -16047261 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 3 1380 2943 61 3 0 chr13 104237285 104237661 -16046651 + MTA_Mm LTR MaLR 20 396 0 3 1380 189 329 12 25 chr13 104238045 104238126 -16046186 - MIRm SINE MIR -122 154 75 3 1380 474 236 27 9 chr13 104238181 104238292 -16046020 - PB1D9 SINE Alu -1 119 7 3 1380 666 283 36 52 chr13 104238479 104238729 -16045583 + B4A SINE B4 2 247 -45 3 1380 1277 252 97 73 chr13 104238726 104239202 -16045110 + MT2B LTR ERVL 29 515 -86 3 1380 243 0 0 0 chr13 104239202 104239229 -16045083 + (TG)n Simple_repeat Simple_repeat 1 27 0 3 1380 198 0 0 0 chr13 104239276 104239298 -16045014 + (TC)n Simple_repeat Simple_repeat 1 22 0 3 1380 399 21 0 0 chr13 104239298 104239345 -16044967 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1380 561 76 29 0 chr13 104239345 104239450 -16044862 + (GA)n Simple_repeat Simple_repeat 1 108 0 3 1380 529 295 203 9 chr13 104239556 104239768 -16044544 + RMER15 LTR ERVL 307 559 -16 3 1380 39 0 0 0 chr13 104241216 104241255 -16043057 + AT_rich Low_complexity Low_complexity 1 39 0 3 1380 1591 218 90 23 chr13 104241885 104242274 -16042038 - MTD LTR MaLR 0 419 5 3 1380 387 0 0 0 chr13 104243825 104243868 -16040444 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1380 2015 253 81 28 chr13 104244049 104244894 -16039418 - L1_Rod LINE L1 -846 3068 2142 3 1380 23 54 0 0 chr13 104244990 104245027 -16039285 + AT_rich Low_complexity Low_complexity 1 37 0 3 1380 614 249 46 5 chr13 104245094 104245288 -16039024 - L1MA8 LINE L1 -26 6265 6064 3 1380 833 218 65 40 chr13 104245610 104245811 -16038501 - URR1B DNA MER1_type -1 224 19 3 1380 861 138 0 44 chr13 104245878 104246014 -16038298 - B3 SINE B2 -86 130 1 3 1380 1241 56 0 6 chr13 104246024 104246204 -16038108 + (TTC)n Simple_repeat Simple_repeat 2 180 0 4 1380 206 250 0 0 chr13 104246204 104246248 -16038064 + CT-rich Low_complexity Low_complexity 1 44 0 4 1380 22 0 0 0 chr13 104246652 104246674 -16037638 + AT_rich Low_complexity Low_complexity 1 22 0 4 1380 201 74 0 0 chr13 104246760 104246787 -16037525 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1380 35 54 0 0 chr13 104246926 104246982 -16037330 + AT_rich Low_complexity Low_complexity 1 56 0 4 1380 552 203 13 121 chr13 104247069 104247226 -16037086 + B1_Mur3 SINE Alu 2 141 -8 4 1380 508 264 79 36 chr13 104247343 104247508 -16036804 - MTEa LTR MaLR 0 379 208 4 1380 771 174 14 27 chr13 104247672 104247820 -16036492 + B1_Mur3 SINE Alu 3 148 -1 4 1380 349 132 44 0 chr13 104247861 104247929 -16036383 + Lx5 LINE L1 6183 6253 -797 4 1380 857 269 57 30 chr13 104247931 104248047 -16036265 - L1_Rod LINE L1 -3636 2211 2097 3 1380 189 0 0 0 chr13 104248047 104248068 -16036244 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 4 1380 857 269 57 30 chr13 104248068 104248284 -16036028 - L1_Rod LINE L1 -3751 2096 1872 3 1380 30 45 0 0 chr13 104248284 104248328 -16035984 + AT_rich Low_complexity Low_complexity 1 44 0 4 1380 2336 239 38 20 chr13 104248518 104249237 -16035075 - L1_Rod LINE L1 -3950 1897 1163 3 1380 526 280 45 6 chr13 104249276 104249452 -16034860 - L1_Rod LINE L1 -6523 1085 903 3 1380 250 263 136 34 chr13 104250823 104250941 -16033371 + RMER15 LTR ERVL 1 130 -445 4 1380 580 261 211 31 chr13 104251148 104251536 -16032776 - HAL1 LINE L1 -794 1713 1256 4 1380 255 285 191 29 chr13 104251564 104251842 -16032470 - HAL1 LINE L1 -1306 1201 879 4 1380 674 308 95 66 chr13 104252664 104252747 -16031565 - BLACKJACK DNA AcHobo -27 2917 2835 4 1380 399 226 125 19 chr13 104252747 104252851 -16031461 + PB1D10 SINE Alu 2 116 -1 4 1380 674 308 95 66 chr13 104252851 104253431 -16030881 - BLACKJACK DNA AcHobo -110 2834 2236 4 1380 357 351 4 76 chr13 104253458 104253720 -16030592 - BLACKJACK DNA AcHobo -1098 1846 1604 4 1380 357 322 86 9 chr13 104253805 104253854 -16030458 - PB1 SINE Alu 0 127 77 4 1380 2514 156 39 12 chr13 104253854 104254264 -16030048 - MTC LTR MaLR 0 421 1 4 1380 357 322 86 9 chr13 104254264 104254330 -16029982 - PB1 SINE Alu -51 76 5 4 1380 577 304 92 133 chr13 104254313 104254572 -16029740 - BLACKJACK DNA AcHobo -1315 1629 1356 4 1380 948 203 62 38 chr13 104254572 104254782 -16029530 + B3 SINE B2 2 216 0 4 1380 577 304 92 133 chr13 104254782 104255231 -16029081 - BLACKJACK DNA AcHobo -1589 1355 950 4 1380 253 140 35 0 chr13 104255314 104255371 -16028941 + CT-rich Low_complexity Low_complexity 2 60 0 4 1380 230 318 30 0 chr13 104255776 104255842 -16028470 + L1M4 LINE L1 356 423 -6119 4 1380 22 0 0 0 chr13 104255858 104255880 -16028432 + AT_rich Low_complexity Low_complexity 1 22 0 4 1380 647 268 152 5 chr13 104256005 104256215 -16028097 + L1M4 LINE L1 585 825 -5717 4 1380 198 103 0 0 chr13 104256215 104256244 -16028068 + (CTTG)n Simple_repeat Simple_repeat 2 30 0 4 1380 1095 290 103 21 chr13 104256326 104256840 -16027472 + L1M4 LINE L1 5179 5734 -910 4 1380 612 200 0 0 chr13 104256994 104257124 -16027188 + CT-rich Low_complexity Low_complexity 3 132 0 4 1380 231 238 143 0 chr13 104257337 104257400 -16026912 - Lx8 LINE L1 -342 7131 7060 4 1380 5539 112 91 27 chr13 104257645 104258506 -16025806 - Lx2 LINE L1 -1 6996 6081 4 1380 3559 67 0 39 chr13 104258508 104258915 -16025397 + Lx2 LINE L1 5528 5913 -1084 4 1380 198 0 0 0 chr13 104258915 104258937 -16025375 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1380 3559 59 0 46 chr13 104258937 104259066 -16025246 + Lx2 LINE L1 5914 6042 -955 4 1380 285 275 0 0 chr13 104261045 104261223 -16023089 + (TGAG)n Simple_repeat Simple_repeat 1 178 0 4 1380 2366 107 70 45 chr13 104261440 104261901 -16022411 - MT2B LTR ERVL 0 601 1 4 1380 282 273 192 7 chr13 104261902 104262053 -16022259 - L1MB3 LINE L1 -12 6171 5993 4 1380 226 256 21 32 chr13 104262706 104262799 -16021513 + L1M3 LINE L1 5550 5641 -542 4 1380 722 260 136 16 chr13 104262803 104263581 -16020731 - L1MB3 LINE L1 -207 5964 5080 4 1380 477 258 102 102 chr13 104263584 104263770 -16020542 + B3A SINE B2 4 189 -6 4 1380 332 252 121 0 chr13 104264824 104264923 -16019389 + PB1D10 SINE Alu 2 112 -37 4 1380 282 245 0 0 chr13 104264917 104264966 -16019346 + ID SINE ID 34 82 -142 4 1380 316 170 79 213 chr13 104264967 104265094 -16019218 + PB1D7 SINE Alu 4 113 -7 4 1380 339 268 0 0 chr13 104266429 104266511 -16017801 + ID_B1 SINE B4 143 224 0 4 1380 1562 78 0 5 chr13 104266892 104267086 -16017226 - B2_Mm2 SINE B2 -2 193 1 4 1380 326 42 0 20 chr13 104267130 104267179 -16017133 + (GTTTG)n Simple_repeat Simple_repeat 2 49 0 4 1380 1146 96 14 0 chr13 104267184 104267330 -16016982 - B1_Mus1 SINE Alu 0 148 1 4 1380 22 35 0 0 chr13 104267414 104267443 -16016869 + AT_rich Low_complexity Low_complexity 1 29 0 4 1380 289 302 112 47 chr13 104268688 104268858 -16015454 - MIR3 SINE MIR -25 183 3 4 1380 203 282 82 41 chr13 104269960 104270082 -16014230 + L2a LINE L2 3271 3397 -29 4 1380 478 258 67 0 chr13 104270861 104270981 -16013331 - ID_B1 SINE B4 -3 221 94 4 1380 204 301 65 46 chr13 104271586 104271694 -16012618 - MIRb SINE MIR -38 230 121 4 1380 3068 199 18 11 chr13 104271877 104272436 -16011876 + Lx5 LINE L1 6475 7037 -13 4 1380 608 74 0 21 chr13 104272440 104272536 -16011776 + (TAAA)n Simple_repeat Simple_repeat 4 97 0 4 1380 207 0 0 0 chr13 104273072 104273095 -16011217 + (A)n Simple_repeat Simple_repeat 1 23 0 4 1380 1654 104 5 0 chr13 104274393 104274615 -16009697 + Lx LINE L1 6425 6647 -7 4 1380 649 245 62 20 chr13 104274635 104274781 -16009531 - B3 SINE B2 -61 155 4 4 1380 1188 89 0 0 chr13 104274796 104274976 -16009336 + (TCC)n Simple_repeat Simple_repeat 1 180 0 4 1380 185 154 0 25 chr13 104274979 104275019 -16009293 + CT-rich Low_complexity Low_complexity 1 39 0 4 1380 32 26 0 0 chr13 104275034 104275073 -16009239 + AT_rich Low_complexity Low_complexity 1 39 0 4 1380 209 33 0 32 chr13 104275153 104275184 -16009128 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 4 1380 240 35 0 0 chr13 104275244 104275273 -16009039 + (CCA)n Simple_repeat Simple_repeat 1 29 0 4 1380 3070 262 67 35 chr13 104275282 104276207 -16008105 - Lx7 LINE L1 -348 7348 6394 4 1380 565 152 25 17 chr13 104276218 104276338 -16007974 + Lx7 LINE L1 4055 4175 -1705 4 1380 207 0 0 0 chr13 104276338 104276361 -16007951 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1380 1655 219 93 30 chr13 104276361 104276491 -16007821 + RLTR16 LTR ERVK 1 132 -373 4 1380 423 0 0 0 chr13 104276491 104276538 -16007774 + (GA)n Simple_repeat Simple_repeat 1 47 0 4 1380 1655 219 93 30 chr13 104276538 104276789 -16007523 + RLTR16 LTR ERVK 133 407 -98 4 1380 180 0 0 0 chr13 104276789 104276809 -16007503 + (TG)n Simple_repeat Simple_repeat 2 21 0 4 1380 1655 219 93 30 chr13 104276809 104276901 -16007411 + RLTR16 LTR ERVK 408 504 -1 4 1380 4756 234 55 76 chr13 104276904 104277313 -16006999 + Lx7 LINE L1 4202 4598 -3098 4 1380 573 206 0 0 chr13 104277313 104277405 -16006907 - B1_Mur3 SINE Alu -56 93 2 4 1380 4756 234 55 76 chr13 104277405 104279230 -16005082 + Lx7 LINE L1 4599 6375 -1321 4 1380 595 282 99 110 chr13 104279577 104279654 -16004658 + MTEa LTR MaLR 1 81 -298 4 1380 333 0 0 0 chr13 104279654 104279691 -16004621 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1380 595 282 99 110 chr13 104279691 104279996 -16004316 + MTEa LTR MaLR 82 378 -1 4 1380 378 0 0 0 chr13 104280988 104281030 -16003282 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1380 216 0 0 0 chr13 104281716 104281740 -16002572 + (TC)n Simple_repeat Simple_repeat 1 24 0 4 1380 180 0 0 0 chr13 104281740 104281759 -16002553 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1380 351 0 0 0 chr13 104281759 104281797 -16002515 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 1380 674 337 20 0 chr13 104282174 104282376 -16001936 - B4A SINE B4 -32 260 55 4 1380 270 248 104 9 chr13 104282669 104282775 -16001537 - MER5A DNA MER1_type -47 142 27 4 1380 936 226 9 14 chr13 104283407 104283618 -16000694 + B3 SINE B2 1 210 -6 4 1380 261 314 12 0 chr13 104283855 104283941 -16000371 + MIR SINE MIR 49 135 -73 4 1380 437 333 88 0 chr13 104283971 104284175 -16000137 - L3 LINE CR1 -137 4352 4131 4 1380 231 36 0 0 chr13 104284279 104284307 -16000005 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 4 1380 381 329 0 33 chr13 104284307 104284458 -15999854 + B1F SINE Alu 2 147 -2 4 1380 325 301 47 70 chr13 104284556 104284770 -15999542 + Tigger12c DNA MER2_type 1 209 -525 4 1380 1445 204 139 64 chr13 104284999 104285387 -15998925 + MTD LTR MaLR 3 419 0 4 1380 591 99 0 0 chr13 104285942 104286043 -15998269 + (TG)n Simple_repeat Simple_repeat 1 101 0 4 1380 300 346 128 18 chr13 104286409 104286691 -15997621 - L1MC LINE L1 -2077 5805 5493 4 1380 381 206 85 8 chr13 104286698 104286816 -15997496 - MLT1E1A LTR MaLR -3 677 584 4 1380 317 224 336 13 chr13 104286927 104287076 -15997236 - MLT1E1A LTR MaLR -372 197 1 4 1380 258 278 22 0 chr13 104287192 104287282 -15997030 - L1MA10 LINE L1 -57 6277 6186 4 1380 297 0 0 0 chr13 104287399 104287432 -15996880 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1380 326 260 182 14 chr13 104287524 104287672 -15996640 + L1M3 LINE L1 3370 3542 -2598 4 1380 668 210 0 6 chr13 104288291 104288418 -15995894 + (CA)n Simple_repeat Simple_repeat 2 128 0 4 1380 3103 83 2 0 chr13 104288418 104288838 -15995474 + BGLII LTR ERVK 1 421 0 4 1380 668 210 0 6 chr13 104288838 104288878 -15995434 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1380 399 279 39 124 chr13 104288970 104289203 -15995109 - Lx8 LINE L1 -1173 6300 6088 4 1380 261 0 0 0 chr13 104289499 104289528 -15994784 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1380 378 285 102 22 chr13 104290530 104290756 -15993556 - L1MEf LINE L1 -2174 4832 4589 4 1380 228 35 0 0 chr13 104290802 104290831 -15993481 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1380 304 260 175 38 chr13 104290834 104290994 -15993318 - B4A SINE B4 -55 237 56 4 1380 730 93 39 0 chr13 104291105 104291370 -15992942 + (TAGA)n Simple_repeat Simple_repeat 1 275 0 4 1380 241 206 20 71 chr13 104292398 104292497 -15991815 - L1MEf LINE L1 -3666 3668 3575 4 1380 853 269 76 17 chr13 104292515 104292859 -15991453 - L1MEf LINE L1 -4070 3032 2669 4 1380 325 286 135 66 chr13 104293029 104293407 -15990905 - L1MEf LINE L1 -5194 1908 1505 4 1380 21 36 0 0 chr13 104293676 104293704 -15990608 + AT_rich Low_complexity Low_complexity 1 28 0 4 1380 1662 131 80 22 chr13 104293735 104294047 -15990265 + MTB_Mm LTR MaLR 1 330 -77 4 1380 729 216 67 123 chr13 104294105 104294300 -15990012 + B3A SINE B2 1 184 -11 4 1380 889 171 7 0 chr13 104294316 104294462 -15989850 + B1_Mur3 SINE Alu 3 149 0 4 1380 411 21 0 0 chr13 104294476 104294524 -15989788 + (GGGA)n Simple_repeat Simple_repeat 2 49 0 4 1380 830 281 101 44 chr13 104294564 104294770 -15989542 - L1MDa LINE L1 -2464 4073 3838 4 1380 317 135 0 0 chr13 104294770 104294822 -15989490 + L1MA5 LINE L1 6244 6295 -5 4 1380 830 281 101 44 chr13 104294822 104295118 -15989194 - L1MDa LINE L1 -2700 3837 3542 4 1380 269 307 8 30 chr13 104295126 104295257 -15989055 - ID4_ SINE ID -22 130 3 4 1380 1438 244 126 69 chr13 104295277 104296301 -15988011 - L1MDa LINE L1 -3080 3457 2383 4 1380 504 121 0 0 chr13 104296337 104296428 -15987884 + (TG)n Simple_repeat Simple_repeat 1 91 0 4 1380 453 339 25 34 chr13 104296464 104296702 -15987610 - B4A SINE B4 -55 237 2 4 1380 260 177 0 46 chr13 104296998 104297063 -15987249 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1380 1703 283 118 53 chr13 104297067 104298479 -15985833 - L1MDa LINE L1 -4311 2322 819 4 1380 253 355 115 29 chr13 104298515 104298654 -15985658 - L1MDa LINE L1 -6023 610 460 4 1380 315 271 193 15 chr13 104298744 104298879 -15985433 - L1MDa LINE L1 -6289 344 186 4 1380 320 311 68 0 chr13 104298997 104299100 -15985212 - Lx8 LINE L1 -218 7255 7146 5 1380 317 241 94 8 chr13 104299148 104299184 -15985128 - L1MDa LINE L1 -6491 142 103 4 1380 348 24 0 0 chr13 104299184 104299225 -15985087 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1380 317 241 94 8 chr13 104299225 104299305 -15985007 - L1MDa LINE L1 -6531 102 17 4 1380 182 322 128 11 chr13 104299532 104299626 -15984686 - L2b LINE L2 -31 3344 3240 5 1380 1722 203 19 74 chr13 104300015 104300477 -15983835 + RMER19C LTR ERVK 175 611 0 5 1380 315 0 0 0 chr13 104300815 104300850 -15983462 + (TTA)n Simple_repeat Simple_repeat 2 36 0 5 1380 439 246 39 0 chr13 104301422 104301552 -15982760 - MLT1D LTR MaLR -7 498 364 5 1380 246 314 96 45 chr13 104301597 104301774 -15982538 - MLT1D LTR MaLR -221 284 99 5 1380 368 149 27 0 chr13 104301880 104301954 -15982358 + CT-rich Low_complexity Low_complexity 4 79 0 5 1380 294 205 25 191 chr13 104302009 104302166 -15982146 - MLT1D LTR MaLR -241 133 3 5 1380 921 93 35 6 chr13 104303274 104303447 -15980865 + (TCTA)n Simple_repeat Simple_repeat 2 179 0 5 1380 21 36 0 0 chr13 104304608 104304636 -15979676 + AT_rich Low_complexity Low_complexity 1 28 0 5 1380 231 159 15 73 chr13 104304736 104304804 -15979508 + A-rich Low_complexity Low_complexity 4 67 0 5 1380 274 217 50 0 chr13 104304848 104304908 -15979404 - Lx7 LINE L1 -416 7280 7218 5 1380 1438 213 76 194 chr13 104305011 104305432 -15978880 - Lx6 LINE L1 -169 7291 6922 5 1380 1419 89 0 5 chr13 104305432 104305624 -15978688 - B2_Mm2 SINE B2 -3 192 2 5 1380 1438 213 76 194 chr13 104305624 104305768 -15978544 - Lx6 LINE L1 -539 6921 6793 5 1380 354 292 73 44 chr13 104305774 104305794 -15978518 - L1MEg LINE L1 -3931 2077 2061 5 1380 447 78 0 0 chr13 104305794 104305858 -15978454 + (GTGTG)n Simple_repeat Simple_repeat 4 67 0 5 1380 354 292 73 44 chr13 104305858 104306109 -15978203 - L1MEg LINE L1 -3948 2060 1798 5 1380 391 260 19 51 chr13 104306531 104306689 -15977623 - L1MEg LINE L1 -4795 1289 1137 5 1380 896 194 99 5 chr13 104307424 104307616 -15976696 + B3 SINE B2 2 211 -5 5 1380 435 19 0 0 chr13 104307857 104307909 -15976403 + (TTTC)n Simple_repeat Simple_repeat 1 52 0 5 1380 455 243 27 0 chr13 104309665 104309776 -15974536 - B3A SINE B2 -83 115 2 5 1380 189 45 42 83 chr13 104309782 104309830 -15974482 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 5 1380 313 272 50 0 chr13 104310290 104310373 -15973939 + B1F1 SINE Alu 4 97 -30 5 1380 1557 17 0 0 chr13 104310385 104310565 -15973747 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 5 1380 293 316 140 0 chr13 104311424 104311620 -15972692 + ERVL-int LTR ERVL 4400 4670 -1087 5 1380 360 370 122 22 chr13 104312535 104312764 -15971548 + LTR33A LTR ERVL 36 287 -233 5 1380 206 0 0 65 chr13 104312981 104313012 -15971300 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1380 1032 276 48 101 chr13 104313083 104313359 -15970953 - L1MB7 LINE L1 -66 6118 5862 5 1380 903 256 40 0 chr13 104313359 104313558 -15970754 - B3 SINE B2 -8 208 2 5 1380 1032 276 48 101 chr13 104313558 104313776 -15970536 - L1MB7 LINE L1 -323 5861 5650 5 1380 271 288 125 53 chr13 104313866 104314170 -15970142 - L1M5 LINE L1 -303 5821 5496 5 1380 531 45 0 0 chr13 104314586 104314652 -15969660 + (GA)n Simple_repeat Simple_repeat 2 67 0 5 1380 231 36 0 0 chr13 104314652 104314679 -15969633 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 5 1380 395 261 59 0 chr13 104314724 104314843 -15969469 + RSINE1 SINE B4 1 126 -39 5 1380 304 47 23 0 chr13 104314863 104314906 -15969406 - HAL1-3A_ME LINE L1 -840 2018 1975 5 1380 200 103 51 0 chr13 104314906 104314945 -15969367 + (TCTG)n Simple_repeat Simple_repeat 4 44 0 5 1380 3846 119 158 1 chr13 104315034 104315321 -15968991 + RMER6A LTR ERVK 1 310 -446 5 1380 613 45 22 0 chr13 104315321 104315410 -15968902 + (GA)n Simple_repeat Simple_repeat 2 92 0 5 1380 3846 119 158 1 chr13 104315410 104315776 -15968536 + RMER6A LTR ERVK 311 756 0 5 1380 405 39 0 0 chr13 104315834 104315885 -15968427 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1380 230 276 0 0 chr13 104316278 104316336 -15967976 + ID SINE ID 2 59 -165 5 1380 670 253 35 59 chr13 104316547 104316749 -15967563 - B3A SINE B2 0 198 2 5 1380 410 301 130 35 chr13 104317787 104318156 -15966156 - MLT1D LTR MaLR -92 413 10 5 1380 231 167 0 0 chr13 104318354 104318396 -15965916 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 5 1380 315 0 0 0 chr13 104318396 104318431 -15965881 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1380 826 174 7 7 chr13 104319401 104319546 -15964766 + B1_Mur3 SINE Alu 3 147 -2 5 1380 242 29 0 28 chr13 104319546 104319582 -15964730 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5 1380 807 108 0 0 chr13 104321479 104321599 -15962713 + (GAAA)n Simple_repeat Simple_repeat 2 121 0 5 1380 428 255 0 0 chr13 104322751 104322845 -15961467 + URR1B DNA MER1_type 1 94 -131 5 1380 6272 62 0 0 chr13 104322845 104323615 -15960697 + L1Md_F2 LINE L1 4816 5585 -298 5 1380 8123 50 1 4 chr13 104323616 104324604 -15959708 + L1Md_F2 LINE L1 5587 6571 -11 5 1380 29 0 0 0 chr13 104324604 104324633 -15959679 + AT_rich Low_complexity Low_complexity 1 29 0 5 1380 829 141 20 0 chr13 104324636 104324785 -15959527 + URR1B DNA MER1_type 74 225 0 5 1380 305 360 55 73 chr13 104325287 104325614 -15958698 - MLT1J LTR MaLR -79 433 113 5 1380 459 0 0 0 chr13 104325853 104325904 -15958408 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1380 257 366 0 0 chr13 104327583 104327706 -15956606 - MIR SINE MIR -56 206 84 5 1380 561 239 129 7 chr13 104327714 104327853 -15956459 - B3 SINE B2 -17 199 44 5 1380 467 198 0 10 chr13 104327927 104328024 -15956288 - B1F SINE Alu -53 96 1 5 1380 476 198 0 24 chr13 104328288 104328412 -15955900 - Lx9 LINE L1 -1 7643 7523 5 1380 23 54 0 0 chr13 104328648 104328685 -15955627 + AT_rich Low_complexity Low_complexity 1 37 0 5 1380 1213 291 131 24 chr13 104329686 104330274 -15954038 - MER82 DNA MER2_type 0 653 3 5 1380 546 0 133 0 chr13 104330801 104331004 -15953308 + (CAGG)n Simple_repeat Simple_repeat 1 229 0 5 1380 235 316 85 8 chr13 104331044 104331162 -15953150 + MIRb SINE MIR 33 159 -109 5 1380 181 205 51 0 chr13 104331340 104331379 -15952933 - MIRc SINE MIR -192 76 36 5 1380 197 273 0 47 chr13 104331373 104331459 -15952853 + MIRc SINE MIR 160 238 -30 5 172 3521 209 30 59 chr13 104333085 104333961 -15950351 + Lx7 LINE L1 6810 7659 -37 5 1381 978 152 4 25 chr13 104334078 104334343 -15949969 + GA-rich Low_complexity Low_complexity 1 259 0 5 1381 233 135 0 0 chr13 104334619 104334656 -15949656 + L1M1 LINE L1 5863 5899 -401 5 1381 336 102 0 0 chr13 104334656 104334705 -15949607 + (GGGA)n Simple_repeat Simple_repeat 2 50 0 5 1381 274 241 0 0 chr13 104334970 104335028 -15949284 + PB1D10 SINE Alu 2 59 -58 5 1381 648 222 168 0 chr13 104335572 104335757 -15948555 + B3 SINE B2 1 216 0 5 1381 409 180 191 0 chr13 104335881 104335970 -15948342 - PB1D10 SINE Alu -7 110 5 5 1381 330 156 0 0 chr13 104336431 104336495 -15947817 + (CA)n Simple_repeat Simple_repeat 2 65 0 5 1381 2354 290 95 118 chr13 104336788 104337739 -15946573 + L1_Mur3 LINE L1 3248 4222 -1658 5 1381 221 181 361 0 chr13 104337739 104337811 -15946501 - PB1D10 SINE Alu -7 110 13 5 1381 2354 290 95 118 chr13 104337811 104338733 -15945579 + L1_Mur3 LINE L1 4223 5169 -711 5 1381 1428 84 21 0 chr13 104338733 104338923 -15945389 + B2_Mm2 SINE B2 2 195 0 5 1381 2354 290 95 118 chr13 104338923 104339146 -15945166 + L1_Mur3 LINE L1 5170 5367 -513 5 1381 962 143 7 13 chr13 104339146 104339295 -15945017 + B1_Mur2 SINE Alu 1 148 -1 5 1381 579 168 43 51 chr13 104339330 104339468 -15944844 + B1_Mus2 SINE Alu 9 145 -2 5 1381 1603 258 71 83 chr13 104339470 104340303 -15944009 + Lx7 LINE L1 5293 6157 -1539 5 1381 520 250 29 120 chr13 104340351 104340560 -15943752 + ID_B1 SINE B4 4 193 -31 5 1381 180 0 0 0 chr13 104340560 104340580 -15943732 + (TA)n Simple_repeat Simple_repeat 2 21 0 5 1381 21 0 0 0 chr13 104340617 104340638 -15943674 + AT_rich Low_complexity Low_complexity 1 21 0 5 1381 312 248 49 16 chr13 104340826 104340949 -15943363 - MER97c DNA MER1_type? -911 179 53 5 1381 36400 65 4 13 chr13 104340949 104347055 -15937257 - L1Md_F2 LINE L1 -2 6580 531 5 1381 459 134 0 0 chr13 104347145 104347227 -15937085 + (TG)n Simple_repeat Simple_repeat 2 83 0 5 1381 724 288 18 40 chr13 104349554 104349778 -15934534 + B4 SINE B4 2 220 -72 5 1381 267 31 0 0 chr13 104349784 104349816 -15934496 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1381 210 308 0 0 chr13 104351154 104351206 -15933106 + B1_Mur2 SINE Alu 63 114 -35 5 1381 735 81 0 39 chr13 104351231 104351359 -15932953 + (GAAA)n Simple_repeat Simple_repeat 4 126 0 5 1381 180 231 0 0 chr13 104353089 104353128 -15931184 + L2a LINE L2 3127 3165 -261 5 1381 227 335 37 56 chr13 104353245 104353460 -15930852 - LTR79 LTR ERVL -48 479 269 5 1381 194 332 68 72 chr13 104355727 104355854 -15928458 - MIRb SINE MIR -6 262 134 5 1381 804 115 0 0 chr13 104355854 104355976 -15928336 + (GGAA)n Simple_repeat Simple_repeat 3 124 0 5 1381 194 332 68 72 chr13 104355976 104356085 -15928227 - MIRb SINE MIR -135 133 27 5 1381 32 43 0 0 chr13 104356362 104356408 -15927904 + AT_rich Low_complexity Low_complexity 1 46 0 5 1381 38772 30 0 0 chr13 104356408 104363042 -15921270 - L1Md_T LINE L1 -1 6584 1 5 1381 487 299 18 6 chr13 104363523 104363691 -15920621 + MLT1C LTR MaLR 7 176 -291 5 1381 312 330 11 0 chr13 104363696 104363790 -15920522 + PB1D10 SINE Alu 2 96 -21 5 1381 609 259 46 15 chr13 104363872 104364068 -15920244 + MLT1C LTR MaLR 227 428 -39 5 1381 1629 139 19 0 chr13 104364200 104364467 -15919845 + Lx4A LINE L1 6787 7058 0 5 1381 778 40 0 0 chr13 104364474 104364575 -15919737 + B1_Mm SINE Alu 1 101 -46 5 1381 312 27 0 0 chr13 104365363 104365400 -15918912 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1381 894 142 267 0 chr13 104365939 104366115 -15918197 - URR1B DNA MER1_type 0 225 3 5 1381 257 331 7 107 chr13 104366660 104366809 -15917503 - MLT1A0 LTR MaLR -231 134 1 5 1381 230 287 71 26 chr13 104366819 104366973 -15917339 + L2a LINE L2 3266 3426 0 5 1381 645 274 22 31 chr13 104367152 104367374 -15916938 - Charlie26a DNA MER1_type 0 325 106 5 1381 380 352 81 47 chr13 104367732 104367857 -15916455 + MER21B LTR ERV1 345 469 -394 5 1381 1063 145 148 15 chr13 104367857 104368053 -15916259 - URR1A DNA MER1_type -4 222 1 5 1381 380 352 81 47 chr13 104368053 104368311 -15916001 + MER21B LTR ERV1 470 741 -122 5 1381 180 0 0 0 chr13 104368394 104368414 -15915898 + (TTTTG)n Simple_repeat Simple_repeat 4 23 0 5 1381 1003 102 7 45 chr13 104368418 104368430 -15915882 - B1_Mus1 SINE Alu 0 148 140 6 1381 342 121 0 0 chr13 104368430 104368496 -15915816 + (ATTG)n Simple_repeat Simple_repeat 2 67 0 6 1381 1003 102 7 45 chr13 104368496 104368637 -15915675 - B1_Mus1 SINE Alu -9 139 1 6 1381 422 132 0 13 chr13 104368749 104368826 -15915486 + (TA)n Simple_repeat Simple_repeat 1 76 0 6 1381 3708 76 0 2 chr13 104369765 104370241 -15914071 + L1Md_F2 LINE L1 6098 6572 -10 6 1381 277 253 0 54 chr13 104370764 104370856 -15913456 + MIRc SINE MIR 44 130 -138 6 1381 409 296 53 18 chr13 104371963 104372245 -15912067 + L1M2 LINE L1 1482 1773 -5076 6 1381 36367 43 0 3 chr13 104372256 104377569 -15906743 + L1Md_T LINE L1 196 5589 -297 6 1381 8663 30 0 1 chr13 104377569 104378566 -15905746 + L1Md_T LINE L1 5590 6585 0 6 1381 22 35 0 0 chr13 104378633 104378662 -15905650 + AT_rich Low_complexity Low_complexity 1 29 0 6 1381 357 289 35 21 chr13 104378793 104378938 -15905374 + GA-rich Low_complexity Low_complexity 4 150 0 6 1381 759 303 109 14 chr13 104378946 104379804 -15904508 + L1M2 LINE L1 2067 3014 -3834 6 1381 351 44 0 0 chr13 104380428 104380473 -15903839 + (T)n Simple_repeat Simple_repeat 1 45 0 6 1381 234 183 60 0 chr13 104380577 104380637 -15903675 + L1MA5 LINE L1 5883 5945 -355 6 1381 783 221 32 0 chr13 104380912 104381070 -15903242 + RSINE1 SINE B4 3 165 0 6 1381 222 207 0 0 chr13 104381089 104381147 -15903165 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1381 2853 274 90 29 chr13 104381172 104381366 -15902946 + Lx8 LINE L1 6412 6613 -860 6 1381 1536 156 24 63 chr13 104381366 104381701 -15902611 - RLTRETN_Mm LTR ERVK 0 322 1 6 1381 2853 274 90 29 chr13 104381701 104382367 -15901945 + Lx8 LINE L1 6614 7334 -139 6 1381 423 0 0 0 chr13 104382367 104382414 -15901898 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 6 1381 2853 274 90 29 chr13 104382414 104382543 -15901769 + Lx8 LINE L1 7335 7461 -12 6 1381 291 85 0 0 chr13 104383603 104383650 -15900662 + (CTTG)n Simple_repeat Simple_repeat 1 47 0 6 1381 267 261 0 0 chr13 104383650 104383715 -15900597 - PB1D10 SINE Alu -12 105 41 6 1381 378 257 0 0 chr13 104384965 104385035 -15899277 + Lx8 LINE L1 6225 6294 -1179 6 1381 2411 300 94 25 chr13 104385052 104385947 -15898365 + Lx8 LINE L1 6511 7467 -6 6 1381 23 0 0 0 chr13 104385953 104385976 -15898336 + AT_rich Low_complexity Low_complexity 1 23 0 6 1381 2304 152 16 7 chr13 104386089 104386499 -15897813 + MTC LTR MaLR 1 400 -21 6 1381 259 300 10 39 chr13 104386781 104386885 -15897427 + MLT1N2 LTR MaLR 438 538 -24 6 1381 735 71 0 0 chr13 104387393 104387491 -15896821 + (GGGA)n Simple_repeat Simple_repeat 2 99 0 6 1381 6014 48 4 0 chr13 104387575 104388320 -15895992 - L1Md_F2 LINE L1 -1614 4269 3522 6 1381 10301 59 3 7 chr13 104388319 104389617 -15894695 + L1Md_F2 LINE L1 4292 5584 -299 6 1381 8200 44 3 2 chr13 104389620 104390600 -15893712 + L1Md_F2 LINE L1 5588 6568 -14 6 1381 861 84 0 0 chr13 104390886 104391005 -15893307 + (GGAA)n Simple_repeat Simple_repeat 3 121 0 6 1381 27 29 0 0 chr13 104391496 104391530 -15892782 + AT_rich Low_complexity Low_complexity 1 34 0 6 1381 925 312 13 29 chr13 104392745 104393052 -15891260 + Tigger7 DNA MER2_type 2 303 -2188 6 1381 730 254 65 4 chr13 104393048 104393293 -15891019 + Tigger7 DNA MER2_type 2137 2396 -95 6 1381 375 247 23 35 chr13 104393351 104393523 -15890789 + (TG)n Simple_repeat Simple_repeat 1 170 0 6 1381 1011 135 102 61 chr13 104393577 104393670 -15890642 + Lx9 LINE L1 7390 7476 -168 6 1381 492 18 0 0 chr13 104393670 104393727 -15890585 + (TA)n Simple_repeat Simple_repeat 1 57 0 6 1381 1011 135 102 61 chr13 104393727 104393878 -15890434 + Lx9 LINE L1 7477 7644 0 6 1381 281 203 0 17 chr13 104393913 104393973 -15890339 + B4A SINE B4 216 274 -18 6 1381 324 0 0 0 chr13 104394897 104394933 -15889379 + (TA)n Simple_repeat Simple_repeat 2 37 0 6 1381 252 209 149 11 chr13 104395073 104395160 -15889152 + MLT2B1 LTR ERVL 22 120 -436 6 1381 289 326 97 71 chr13 104395163 104395556 -15888756 - MLT1A1 LTR MaLR -3 405 3 6 1381 5210 48 15 18 chr13 104395756 104396447 -15887865 + L1_Mus1 LINE L1 5908 6567 0 6 1381 714 55 0 0 chr13 104396447 104396538 -15887774 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 6 1381 778 271 110 5 chr13 104396539 104396758 -15887554 + Lx8 LINE L1 7115 7356 -117 6 1381 628 291 101 106 chr13 104397497 104397832 -15886480 + MLT2B1 LTR ERVL 153 545 -56 6 1381 1222 209 19 4 chr13 104397922 104398181 -15886131 - MTEb LTR MaLR -116 263 1 6 1381 228 73 54 18 chr13 104398381 104398437 -15885875 + (TTTG)n Simple_repeat Simple_repeat 3 60 0 6 1381 348 241 12 24 chr13 104398526 104398611 -15885701 - MER34A LTR ERV1 -438 133 50 6 1381 326 243 0 18 chr13 104398699 104398808 -15885504 + G-rich Low_complexity Low_complexity 4 110 0 6 1381 813 164 133 22 chr13 104398939 104399120 -15885192 - MTD LTR MaLR -14 405 205 6 1381 279 0 0 0 chr13 104399125 104399156 -15885156 + (TTCC)n Simple_repeat Simple_repeat 1 31 0 6 1381 3200 163 52 13 chr13 104399156 104399800 -15884512 - RMER1A Other Other -13 1017 283 6 1381 435 345 0 28 chr13 104399800 104399982 -15884330 - MTD LTR MaLR -202 217 41 6 1381 2147 251 185 81 chr13 104399998 104401134 -15883178 - MTC-int LTR MaLR -4 1254 1 6 1381 399 21 0 0 chr13 104401139 104401187 -15883125 + (TG)n Simple_repeat Simple_repeat 1 48 0 6 1381 627 303 28 22 chr13 104401212 104401391 -15882921 - B4A SINE B4 -43 249 70 6 1381 1085 90 0 7 chr13 104401400 104401546 -15882766 - B1_Mus1 SINE Alu -2 146 2 6 1381 412 264 0 0 chr13 104401555 104401642 -15882670 - B4A SINE B4 -205 87 1 6 1381 310 232 107 24 chr13 104404933 104405017 -15879295 + MER45R DNA Tip100 10 100 -1481 6 1381 744 288 49 49 chr13 104405092 104405380 -15878932 - B4A SINE B4 0 292 5 6 1381 254 254 0 16 chr13 104405525 104405589 -15878723 + MER45R DNA Tip100 1517 1579 -2 6 1381 1747 107 0 8 chr13 104405690 104405955 -15878357 + RMER13A LTR ERVK 1 263 -597 6 1381 1144 177 164 8 chr13 104406003 104406271 -15878041 + RMER13A LTR ERVK 480 789 -71 6 1381 1284 106 131 0 chr13 104406440 104406639 -15877673 - URR1B DNA MER1_type 0 225 1 6 1381 207 240 20 20 chr13 104406721 104406772 -15877540 - L2b LINE L2 -9 3366 3316 6 1381 2410 95 9 0 chr13 104407221 104407570 -15876742 - ORR1B2 LTR MaLR -8 359 8 6 1381 465 19 0 0 chr13 104408830 104408884 -15875428 + (GA)n Simple_repeat Simple_repeat 1 54 0 6 1381 253 265 10 30 chr13 104408884 104408985 -15875327 - L1M1 LINE L1 -415 5885 5787 6 1381 350 273 75 54 chr13 104411622 104411769 -15872543 + MTEa LTR MaLR 3 152 -227 6 1381 198 103 0 0 chr13 104412361 104412390 -15871922 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1381 795 21 0 0 chr13 104412775 104412868 -15871444 + (GA)n Simple_repeat Simple_repeat 1 93 0 6 1381 1393 28 11 6 chr13 104412873 104413051 -15871261 + (GGAAA)n Simple_repeat Simple_repeat 2 180 0 6 1381 22360 140 72 10 chr13 104414755 104420463 -15863849 - L1_Mus4 LINE L1 0 6636 545 6 1381 274 309 92 61 chr13 104420738 104420960 -15863352 - MIRb SINE MIR -39 229 1 6 1381 2006 171 71 10 chr13 104421029 104421410 -15862902 - MTD LTR MaLR 0 419 13 6 1381 474 18 0 0 chr13 104421410 104421465 -15862847 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1381 2006 171 71 10 chr13 104421465 104421478 -15862834 - MTD LTR MaLR -407 12 1 6 1381 1614 188 26 78 chr13 104421830 104422217 -15862095 - ORR1D1 LTR MaLR 0 374 8 6 1381 3993 32 6 4 chr13 104422893 104423366 -15860946 - L1Md_F3 LINE L1 0 6584 6111 6 1381 1319 90 32 0 chr13 104423381 104423570 -15860742 - B2_Mm2 SINE B2 0 195 1 6 1381 190 206 121 45 chr13 104423898 104423964 -15860348 - L2c LINE L2 -40 3347 3277 6 1381 245 278 91 20 chr13 104424455 104424554 -15859758 - L3 LINE CR1 -100 4389 4284 6 1381 441 0 0 0 chr13 104425903 104425952 -15858360 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1381 222 37 0 0 chr13 104426304 104426331 -15857981 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1381 245 256 57 23 chr13 104426632 104426720 -15857592 + B4 SINE B4 5 95 -197 6 1381 3183 185 0 42 chr13 104426720 104427335 -15856977 + Lx9 LINE L1 6854 7442 -202 6 1381 346 314 8 16 chr13 104427346 104427469 -15856843 + B1F SINE Alu 21 142 -7 6 1381 726 249 14 41 chr13 104427490 104427708 -15856604 - B3 SINE B2 0 216 5 6 1381 2612 222 104 132 chr13 104427932 104428988 -15855324 + RMER1B Other Other 40 1066 0 6 1381 476 307 105 54 chr13 104429186 104429482 -15854830 + LTR82B Low_complexity ERVL 420 730 -100 6 1381 543 307 7 0 chr13 104429685 104429825 -15854487 - B1F SINE Alu 0 149 9 6 1381 257 356 75 17 chr13 104429724 104429844 -15854468 - B4 SINE B4 -94 198 72 6 1381 1248 154 38 9 chr13 104430238 104430448 -15853864 + B3 SINE B2 1 216 0 6 1381 632 233 0 223 chr13 104431205 104431487 -15852825 + ID_B1 SINE B4 5 223 -1 6 1381 516 290 18 12 chr13 104431717 104431888 -15852424 + MER5B DNA MER1_type 5 176 -2 6 1381 978 19 0 0 chr13 104432005 104432112 -15852200 + U6 snRNA snRNA 1 107 0 6 1381 1966 62 0 0 chr13 104432112 104432420 -15851892 + L1Md_F2 LINE L1 6320 6582 0 6 1381 1071 83 0 0 chr13 104432899 104433068 -15851244 + (TC)n Simple_repeat Simple_repeat 1 169 0 6 1381 198 0 0 0 chr13 104433358 104433380 -15850932 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1381 536 279 19 7 chr13 104433487 104433642 -15850670 + MIRc SINE MIR 82 238 -30 6 1381 637 258 119 13 chr13 104434148 104434384 -15849928 + B4A SINE B4 10 270 -22 6 1381 255 259 21 29 chr13 104434393 104434479 -15849833 + GA-rich Low_complexity Low_complexity 1 85 0 6 1381 297 0 0 0 chr13 104434747 104434780 -15849532 + (T)n Simple_repeat Simple_repeat 1 33 0 6 1381 280 342 59 87 chr13 104435490 104435813 -15848499 - MT2A LTR ERVL -2 531 218 6 1381 313 260 102 44 chr13 104435837 104435974 -15848338 - MTEa LTR MaLR -234 145 1 6 1381 216 97 0 0 chr13 104436645 104436676 -15847636 + (TATG)n Simple_repeat Simple_repeat 1 31 0 6 1381 273 270 85 31 chr13 104436897 104436949 -15847363 - AmnSINE1 SINE SINE -435 140 4 6 1381 294 208 128 13 chr13 104436949 104437027 -15847285 - 5S rRNA rRNA -31 90 4 6 1381 1343 164 4 13 chr13 104437478 104437706 -15846606 + URR1A DNA MER1_type 1 226 0 6 1381 242 305 21 111 chr13 104437793 104437928 -15846384 + L2c LINE L2 3256 3378 -9 6 1381 809 303 58 0 chr13 104437928 104438189 -15846123 + B4 SINE B4 3 278 -14 6 1381 26 0 0 0 chr13 104439173 104439199 -15845113 + AT_rich Low_complexity Low_complexity 1 26 0 6 1381 262 267 156 0 chr13 104439344 104439434 -15844878 - PB1D10 SINE Alu -13 104 1 6 1381 6436 52 2 8 chr13 104439915 104440717 -15843595 - L1Md_F2 LINE L1 0 6582 5785 7 1381 1372 169 4 0 chr13 104441264 104441489 -15842823 + URR1A DNA MER1_type 1 226 0 7 1381 1626 208 82 6 chr13 104442221 104442612 -15841700 - MTD LTR MaLR -4 415 3 7 1381 453 50 0 0 chr13 104442621 104442681 -15841631 + (CATA)n Simple_repeat Simple_repeat 2 61 0 7 1381 324 344 26 0 chr13 104442762 104442913 -15841399 + MLT1E3 LTR MaLR 470 624 0 7 1381 197 310 46 31 chr13 104443018 104443145 -15841167 + MIRb SINE MIR 42 163 -45 7 1381 681 251 103 103 chr13 104444196 104444545 -15839767 + MLT2D LTR ERVL 28 381 -33 7 1381 1268 59 6 0 chr13 104444545 104444715 -15839597 + (CA)n Simple_repeat Simple_repeat 2 172 0 7 1381 681 251 103 103 chr13 104444715 104444752 -15839560 + MLT2D LTR ERVL 382 414 0 7 1381 1541 168 41 79 chr13 104444765 104445133 -15839179 - ORR1D1 LTR MaLR 0 374 21 7 1381 625 250 90 18 chr13 104445213 104445520 -15838792 + L1MC2 LINE L1 5798 6122 -1663 7 1381 24 0 0 0 chr13 104445606 104445630 -15838682 + AT_rich Low_complexity Low_complexity 1 24 0 7 1381 526 124 10 20 chr13 104445689 104445788 -15838524 + GA-rich Low_complexity Low_complexity 3 100 0 7 1381 1062 277 142 36 chr13 104446313 104447004 -15837308 - L1ME2 LINE L1 -78 6086 5317 7 1381 2336 100 15 6 chr13 104447201 104447543 -15836769 + L1_Mus4 LINE L1 6292 6636 0 7 1381 832 160 14 7 chr13 104448692 104448837 -15835475 + B1_Mur4 SINE Alu 5 150 0 7 1381 448 292 9 0 chr13 104448911 104449024 -15835288 + RSINE1 SINE B4 8 121 -44 7 1381 230 143 0 20 chr13 104449065 104449115 -15835197 + CT-rich Low_complexity Low_complexity 3 51 0 7 1381 2440 116 59 3 chr13 104449417 104449789 -15834523 - ORR1B1 LTR MaLR -1 393 1 7 1381 231 278 0 0 chr13 104450427 104450481 -15833831 + (CA)n Simple_repeat Simple_repeat 1 54 0 7 1381 180 200 0 0 chr13 104450481 104450526 -15833786 + GA-rich Low_complexity Low_complexity 3 47 0 7 1381 1279 145 67 10 chr13 104451161 104451335 -15832977 - URR1B DNA MER1_type 0 225 41 7 1381 378 0 0 0 chr13 104451335 104451377 -15832935 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1381 1279 145 67 10 chr13 104451377 104451411 -15832901 - URR1B DNA MER1_type -185 40 6 7 1381 591 53 0 0 chr13 104451717 104451792 -15832520 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 7 1381 623 286 101 5 chr13 104451949 104452167 -15832145 - MER2 DNA MER2_type -3 342 104 7 1381 214 303 30 0 chr13 104452189 104452255 -15832057 - ID4 SINE ID -1 82 15 7 1381 227 349 0 0 chr13 104452264 104452330 -15831982 - MER2 DNA MER2_type -274 71 6 7 1381 408 20 0 0 chr13 104452332 104452381 -15831931 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1381 957 275 58 4 chr13 104452526 104452767 -15831545 + B4 SINE B4 16 269 -23 7 1381 204 40 0 0 chr13 104452767 104452792 -15831520 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1381 315 0 0 0 chr13 104452795 104452830 -15831482 + (GA)n Simple_repeat Simple_repeat 2 36 0 7 1381 273 57 0 0 chr13 104452995 104453030 -15831282 + (CTCA)n Simple_repeat Simple_repeat 1 35 0 7 1381 669 272 106 37 chr13 104453630 104454024 -15830288 + MLT1D LTR MaLR 17 467 -22 7 1381 324 188 0 0 chr13 104454052 104454116 -15830196 + (TG)n Simple_repeat Simple_repeat 1 64 0 7 1381 924 253 143 6 chr13 104454823 104455137 -15829175 - MTD LTR MaLR -45 374 18 7 1381 822 158 20 46 chr13 104455165 104455318 -15828994 + B1_Mur3 SINE Alu 1 149 0 7 1381 626 222 28 7 chr13 104455627 104455772 -15828540 + ORR1D1 LTR MaLR 1 148 -226 7 1381 441 0 0 0 chr13 104455772 104455821 -15828491 + (TC)n Simple_repeat Simple_repeat 1 49 0 7 1381 493 111 0 24 chr13 104455845 104455928 -15828384 + ORR1D1 LTR MaLR 302 382 -2 7 1381 1283 120 16 0 chr13 104456010 104456202 -15828110 - B2_Mm2 SINE B2 0 195 1 7 1381 3551 50 0 2 chr13 104457109 104457547 -15826765 + L1Md_F2 LINE L1 6146 6582 0 7 1381 844 296 59 0 chr13 104457742 104457995 -15826317 - ORR1D2 LTR MaLR 0 370 103 7 1381 252 279 0 56 chr13 104458121 104458193 -15826119 + ID4 SINE ID 2 69 -14 7 1381 745 213 58 24 chr13 104458304 104458511 -15825801 - Tigger2b DNA MER2_type -438 288 75 7 1381 276 235 54 89 chr13 104458601 104458713 -15825599 + ID_B1 SINE B4 99 206 -18 7 1381 887 145 7 7 chr13 104458857 104458996 -15825316 + B1_Mur4 SINE Alu 3 141 -9 7 1381 1201 61 0 0 chr13 104459530 104459677 -15824635 + B1_Mus2 SINE Alu 1 147 0 7 1381 902 133 28 7 chr13 104460034 104460178 -15824134 + B1_Mus1 SINE Alu 1 147 -1 7 1381 488 269 147 29 chr13 104460569 104460814 -15823498 - B4A SINE B4 -18 274 1 7 1381 344 229 9 0 chr13 104461056 104461165 -15823147 + CT-rich Low_complexity Low_complexity 2 111 0 7 1381 1582 32 16 0 chr13 104461321 104461510 -15822802 - B2_Mm1t SINE B2 -1 192 1 7 1381 30 0 0 0 chr13 104461797 104461827 -15822485 + AT_rich Low_complexity Low_complexity 1 30 0 7 1381 180 0 0 0 chr13 104462375 104462395 -15821917 + (CCCCCA)n Simple_repeat Simple_repeat 2 21 0 7 1381 2664 163 73 38 chr13 104462512 104463087 -15821225 + RLTR17 LTR ERVK 98 692 0 7 1381 283 238 0 0 chr13 104463101 104463164 -15821148 - Tigger7 DNA MER2_type -2170 321 259 7 1381 228 197 131 0 chr13 104463317 104463378 -15820934 - L1M6 LINE L1 -5859 637 569 7 1381 214 350 135 11 chr13 104463438 104463623 -15820689 + B4A SINE B4 33 240 -52 7 1381 207 100 0 0 chr13 104463642 104463672 -15820640 + (CA)n Simple_repeat Simple_repeat 1 30 0 7 1381 408 40 0 0 chr13 104463696 104463746 -15820566 + (CA)n Simple_repeat Simple_repeat 1 50 0 7 1381 758 164 106 45 chr13 104463846 104464025 -15820287 + URR1B DNA MER1_type 6 195 -30 7 172 893 283 62 26 chr13 104464248 104464589 -15819723 + MLT1A0 LTR MaLR 13 365 0 7 1382 252 77 58 0 chr13 104464748 104464800 -15819512 + (CACAC)n Simple_repeat Simple_repeat 1 55 0 7 1382 531 0 0 0 chr13 104464816 104464875 -15819437 + (TAGA)n Simple_repeat Simple_repeat 1 59 0 7 1382 778 279 0 15 chr13 104464911 104465111 -15819201 + B3A SINE B2 2 198 0 7 1382 25 0 0 0 chr13 104466019 104466044 -15818268 + AT_rich Low_complexity Low_complexity 1 25 0 7 1382 1370 108 25 0 chr13 104466081 104466285 -15818027 + Lx4A LINE L1 6501 6709 -349 7 1382 366 319 100 11 chr13 104467270 104467460 -15816852 + L3b LINE CR1 54 260 -222 7 1382 473 331 6 6 chr13 104467814 104467990 -15816322 + (TG)n Simple_repeat Simple_repeat 1 176 0 7 1382 249 281 0 0 chr13 104468001 104468058 -15816254 - ID2 SINE ID -24 59 3 7 1382 519 297 20 20 chr13 104468082 104468233 -15816079 + RSINE1 SINE B4 5 155 -10 7 1382 378 286 19 0 chr13 104468508 104468613 -15815699 + PB1D10 SINE Alu 3 109 -8 7 1382 281 307 38 113 chr13 104469624 104469837 -15814475 + MLT1A LTR MaLR 1 197 -177 7 1382 1636 264 64 20 chr13 104470018 104470700 -15813612 + Lx8 LINE L1 5261 5972 -1672 7 1382 1323 124 114 0 chr13 104471033 104471234 -15813078 + URR1A DNA MER1_type 3 226 0 7 1382 970 189 19 44 chr13 104472376 104472581 -15811731 + B3 SINE B2 11 210 -6 7 1382 264 59 0 0 chr13 104472592 104472626 -15811686 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1382 8476 43 2 0 chr13 104474894 104476124 -15808188 - L1Md_F2 LINE L1 -3 6579 5344 7 1382 874 241 13 76 chr13 104476288 104476512 -15807800 + B4A SINE B4 83 292 0 7 1382 587 307 65 13 chr13 104476746 104476977 -15807335 + B4A SINE B4 1 243 -49 7 1382 22 0 0 0 chr13 104477046 104477068 -15807244 + AT_rich Low_complexity Low_complexity 1 22 0 7 1382 241 336 75 20 chr13 104477236 104477382 -15806930 - MIRb SINE MIR -31 237 84 7 1382 703 255 0 0 chr13 104477519 104477660 -15806652 + B1F SINE Alu 1 141 -8 7 1382 918 123 19 0 chr13 104477661 104477823 -15806489 + (GA)n Simple_repeat Simple_repeat 1 165 0 7 1382 32462 133 40 17 chr13 104477830 104479418 -15804894 + L1_Mus2 LINE L1 379 2064 -3819 7 1382 3499 67 0 0 chr13 104479418 104479850 -15804462 + L1_Mus1 LINE L1 6136 6567 0 7 1382 32462 95 7 17 chr13 104479850 104479910 -15804402 + L1_Mus2 LINE L1 2065 2070 -3813 7 1382 592 0 51 0 chr13 104479910 104479988 -15804324 + (GAAA)n Simple_repeat Simple_repeat 3 84 0 7 1382 32462 85 6 13 chr13 104479988 104484483 -15799829 + L1_Mus2 LINE L1 2071 6566 0 7 1382 867 187 0 0 chr13 104484492 104484663 -15799649 + GA-rich Low_complexity Low_complexity 3 173 0 7 1382 2121 162 36 36 chr13 104484826 104485042 -15799270 - MTC LTR MaLR -4 417 211 7 1382 705 45 0 0 chr13 104485042 104485131 -15799181 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 7 1382 1242 124 29 25 chr13 104485132 104485372 -15798940 - Lx LINE L1 -6 6648 6408 7 1382 2121 162 36 36 chr13 104485372 104485570 -15798742 - MTC LTR MaLR -211 210 1 7 1382 217 0 0 57 chr13 104485824 104485859 -15798453 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1382 271 358 62 34 chr13 104486416 104486595 -15797717 - MLT1H LTR MaLR -348 201 18 7 1382 226 228 0 95 chr13 104486876 104486939 -15797373 + RSINE1 SINE B4 108 164 -1 7 1382 674 213 69 12 chr13 104487090 104487350 -15796962 - MTD LTR MaLR -4 415 112 7 1382 700 184 0 60 chr13 104487350 104487500 -15796812 + B1_Mur3 SINE Alu 2 142 -7 7 1382 222 37 0 0 chr13 104487501 104487528 -15796784 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 7 1382 252 239 34 0 chr13 104487545 104487633 -15796679 + GA-rich Low_complexity Low_complexity 1 91 0 7 1382 595 185 8 8 chr13 104487633 104487753 -15796559 - MTD LTR MaLR -299 120 1 7 1382 263 330 0 37 chr13 104488922 104489029 -15795283 - RSINE1 SINE B4 -37 128 26 7 1382 442 197 0 63 chr13 104489151 104489341 -15794971 + (TATATG)n Simple_repeat Simple_repeat 2 179 0 7 1382 380 283 8 16 chr13 104489353 104489475 -15794837 + (TATATG)n Simple_repeat Simple_repeat 5 125 0 7 1382 287 353 51 23 chr13 104489475 104489652 -15794660 - B3A SINE B2 -16 182 1 7 1382 290 286 8 23 chr13 104491090 104491226 -15793086 + MLT1B LTR MaLR 271 451 -16 7 1382 1202 228 10 44 chr13 104491349 104491647 -15792665 + B4 SINE B4 3 290 -2 7 1382 222 37 0 0 chr13 104491667 104491694 -15792618 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1382 240 173 0 0 chr13 104491772 104491824 -15792488 + B3 SINE B2 165 216 0 7 1382 1726 88 42 8 chr13 104491881 104492143 -15792169 + ORR1A2 LTR MaLR 1 271 -56 8 1382 443 95 0 0 chr13 104492200 104492263 -15792049 + ORR1A2 LTR MaLR 257 319 -8 8 1382 520 267 207 9 chr13 104492409 104492636 -15791676 + B4 SINE B4 3 274 -18 8 1382 1208 167 9 5 chr13 104492815 104493032 -15791280 - URR1A DNA MER1_type 0 226 9 8 1382 710 183 0 17 chr13 104493190 104493341 -15790971 + B1_Mur3 SINE Alu 4 142 -5 8 1382 492 62 0 0 chr13 104493462 104493526 -15790786 + (CA)n Simple_repeat Simple_repeat 1 64 0 8 1382 1010 176 93 0 chr13 104494728 104494910 -15789402 - B3 SINE B2 -17 199 1 8 1382 705 156 36 158 chr13 104495067 104495288 -15789024 + B2_Mm2 SINE B2 2 195 0 8 1382 281 326 101 5 chr13 104495484 104495672 -15788640 - RMER15 LTR ERVL -14 561 356 8 1382 857 89 0 0 chr13 104496207 104496331 -15787981 + B2_Mm2 SINE B2 2 125 -70 8 1382 1812 164 111 22 chr13 104496441 104496847 -15787465 + RMER10A LTR ERVL 1 442 0 8 1382 581 265 88 98 chr13 104497019 104497316 -15786996 - ORR1E LTR MaLR -16 343 50 8 1382 279 0 0 0 chr13 104497343 104497374 -15786938 + (TC)n Simple_repeat Simple_repeat 2 32 0 8 1382 207 186 0 0 chr13 104497374 104497417 -15786895 + (TG)n Simple_repeat Simple_repeat 1 43 0 8 1382 254 328 0 0 chr13 104497445 104497506 -15786806 - B4A SINE B4 -2 290 230 8 1382 1965 147 75 43 chr13 104497509 104497908 -15786404 - MTC LTR MaLR -8 413 2 8 1382 669 288 47 0 chr13 104497915 104498106 -15786206 - B4A SINE B4 -89 203 4 8 1382 189 74 0 0 chr13 104498358 104498385 -15785927 + (TA)n Simple_repeat Simple_repeat 2 28 0 8 1382 3656 34 6 119 chr13 104498730 104499266 -15785046 + IAPLTR2_Mm LTR ERVK 1 475 0 8 1382 180 0 0 0 chr13 104501088 104501108 -15783204 + (CCCCCA)n Simple_repeat Simple_repeat 6 25 0 1 1382 800 144 64 7 chr13 104501330 104501470 -15782842 - B1_Mur4 SINE Alu 0 150 3 2 1382 396 0 0 0 chr13 104501978 104502022 -15782290 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1382 690 227 0 104 chr13 104502161 104502343 -15781969 + RSINE1 SINE B4 3 165 0 4 1382 248 224 28 56 chr13 104502374 104502445 -15781867 + MER21B LTR ERV1 13 81 -782 5 1382 486 0 0 0 chr13 104502463 104502517 -15781795 + (TC)n Simple_repeat Simple_repeat 1 54 0 6 1382 2997 59 200 9 chr13 104502531 104502961 -15781351 + RLTR1B LTR ERV1 1 512 0 7 1382 68043 19 2 0 chr13 104502961 104510501 -15773811 + MMERGLN-int LTR ERV1 1 7556 0 7 1382 3007 59 200 9 chr13 104510501 104510931 -15773381 + RLTR1B LTR ERV1 1 512 0 7 1382 1296 236 105 14 chr13 104510931 104511284 -15773028 - MTD LTR MaLR -34 385 1 8 1382 3096 125 73 27 chr13 104511820 104512379 -15771933 + RMER4B LTR ERVK 1 585 0 9 1382 901 148 0 80 chr13 104512400 104512562 -15771750 + B1_Mur4 SINE Alu 1 149 -1 1 1382 317 68 0 0 chr13 104512587 104512631 -15771681 - ORR1A3 LTR MaLR -11 383 340 1 1382 1099 103 0 14 chr13 104512651 104512799 -15771513 - B1_Mus1 SINE Alu -1 147 2 1 1382 1839 110 14 7 chr13 104512801 104513084 -15771228 - ORR1A3 LTR MaLR -41 285 1 1 1382 798 309 115 22 chr13 104513107 104513517 -15770795 + MER21B LTR ERV1 303 750 -113 1 1382 956 290 43 0 chr13 104513960 104514239 -15770073 + MLT1A0 LTR MaLR 75 365 0 1 1382 361 259 8 101 chr13 104514477 104514606 -15769706 + MLT1C LTR MaLR 67 183 -284 1 1382 1063 258 39 28 chr13 104514614 104514897 -15769415 + B4A SINE B4 1 286 -6 1 1382 281 217 238 87 chr13 104515750 104515876 -15768436 - B1F SINE Alu 0 149 5 1 1382 1255 221 84 62 chr13 104515887 104516303 -15768009 - RMER4A LTR ERVK -9 457 33 1 1382 1193 68 0 0 chr13 104516318 104516465 -15767847 - B1_Mus1 SINE Alu 0 148 2 1 1382 293 179 12 52 chr13 104516578 104516659 -15767653 + RMER4A LTR ERVK 29 104 -362 2 1382 200 308 76 11 chr13 104516684 104516776 -15767536 + MER91A DNA Tip100 14 111 -85 2 1382 262 209 132 15 chr13 104517176 104517244 -15767068 + B4A SINE B4 198 273 -19 2 1382 2297 171 86 14 chr13 104517364 104517790 -15766522 + RLTR11A LTR ERVK 1 458 -70 2 1382 189 0 0 0 chr13 104517790 104517811 -15766501 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1382 2297 171 86 14 chr13 104517811 104517875 -15766437 + RLTR11A LTR ERVK 459 525 -3 2 1382 2654 90 193 0 chr13 104518103 104518548 -15765764 - RLTR47_MM LTR ERV1 0 532 2 2 1382 1017 309 54 24 chr13 104518630 104519165 -15765147 - RLTR6-int LTR ERV1 -65 7713 7190 2 1382 400 359 34 9 chr13 104519345 104519578 -15764734 - MuLV-int LTR ERV1 -1997 5609 5371 2 1382 1476 35 41 0 chr13 104519601 104519798 -15764514 + ORR1A1 LTR MaLR 142 346 0 2 1382 13584 60 15 3 chr13 104519798 104521569 -15762743 + ORR1A1-int LTR MaLR 1 1792 0 2 1382 1950 96 70 0 chr13 104521571 104521885 -15762427 + ORR1A1 LTR MaLR 3 338 -8 2 1382 1488 188 80 26 chr13 104521889 104522238 -15762074 + RLTR19 LTR ERVK 86 453 -46 2 1382 2065 237 17 28 chr13 104522328 104522797 -15761515 - MuRRS4-int LTR ERV1 -1049 4014 3551 3 1382 3317 38 10 0 chr13 104522901 104523297 -15761015 + MTB LTR MaLR 1 400 0 3 1382 712 337 68 20 chr13 104523537 104523976 -15760336 - MuLV-int LTR ERV1 -3156 4450 3991 2 1382 1133 307 83 82 chr13 104524006 104525024 -15759288 - RLTR6-int LTR ERV1 -5216 2562 1543 3 1382 468 0 0 0 chr13 104525160 104525212 -15759100 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1382 639 37 0 0 chr13 104525357 104525439 -15758873 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 3 1382 348 312 112 0 chr13 104525456 104525696 -15758616 + L1MEc LINE L1 136 402 -5998 3 1382 630 274 28 42 chr13 104525758 104525975 -15758337 + B4A SINE B4 3 216 -76 3 1382 305 253 0 31 chr13 104526223 104526321 -15757991 + L1MEc LINE L1 610 704 -5696 3 1382 411 244 0 0 chr13 104526533 104526615 -15757697 + ID4_ SINE ID 2 83 0 3 1382 317 280 41 25 chr13 104526892 104527013 -15757299 + L1MEc LINE L1 2548 2670 -3649 3 1382 499 261 109 22 chr13 104527078 104527352 -15756960 + L1MD LINE L1 2683 2980 -3166 3 1382 21 36 0 0 chr13 104527418 104527446 -15756866 + AT_rich Low_complexity Low_complexity 1 28 0 3 1382 510 17 0 0 chr13 104527659 104527718 -15756594 + (CA)n Simple_repeat Simple_repeat 1 59 0 4 1382 1165 68 0 0 chr13 104527810 104527957 -15756355 - B1_Mus2 SINE Alu 0 147 1 4 1382 358 245 36 45 chr13 104528884 104528995 -15755317 - RSINE1 SINE B4 -54 111 2 4 1382 293 220 67 25 chr13 104529907 104529992 -15754320 + ID2 SINE ID 8 96 -56 4 1382 831 102 17 0 chr13 104530224 104530342 -15753970 - PB1D9 SINE Alu 0 120 1 4 1382 305 43 43 0 chr13 104531301 104531347 -15752965 + (CAAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1382 468 0 0 0 chr13 104531962 104532014 -15752298 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1382 25 31 0 0 chr13 104533267 104533299 -15751013 + AT_rich Low_complexity Low_complexity 1 32 0 4 1382 189 125 0 0 chr13 104533899 104533915 -15750397 + (A)n Simple_repeat Simple_repeat 1 16 0 4 1382 1200 27 0 27 chr13 104533915 104534065 -15750247 + B1_Mus2 SINE Alu 2 147 0 4 1382 189 125 0 0 chr13 104534065 104534088 -15750224 + (A)n Simple_repeat Simple_repeat 1 23 0 5 1382 1412 52 124 0 chr13 104535577 104535771 -15748541 + L1Md_F2 LINE L1 6365 6582 0 5 1382 237 271 0 0 chr13 104535800 104535848 -15748464 + RSINE1 SINE B4 37 84 -81 5 1382 21 0 0 0 chr13 104536059 104536080 -15748232 + AT_rich Low_complexity Low_complexity 1 21 0 5 1382 467 203 114 50 chr13 104536736 104536876 -15747436 + B3A SINE B2 45 193 -5 5 1382 305 221 90 22 chr13 104537015 104537149 -15747163 + L1M4 LINE L1 4552 4694 -1446 5 1382 246 205 0 0 chr13 104537156 104537212 -15747100 + B2_Mm2 SINE B2 1 56 -160 5 1382 1201 42 0 0 chr13 104537215 104537359 -15746953 + B1_Mus2 SINE Alu 1 144 -3 5 1382 200 34 0 33 chr13 104537361 104537391 -15746921 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 5 1382 275 316 17 26 chr13 104537391 104537508 -15746804 + B3 SINE B2 101 216 0 5 1382 613 275 86 11 chr13 104537509 104537788 -15746524 + L1M4 LINE L1 4702 5001 -1145 5 1382 381 384 25 6 chr13 104537791 104537951 -15746361 + RSINE1 SINE B4 3 165 0 6 1382 25 0 0 0 chr13 104537968 104537993 -15746319 + AT_rich Low_complexity Low_complexity 1 25 0 6 1382 1189 28 7 7 chr13 104538010 104538147 -15746165 + B1_Mus2 SINE Alu 1 138 -9 6 1382 191 61 0 29 chr13 104538147 104538181 -15746131 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 6 1382 192 200 0 0 chr13 104538328 104538368 -15745944 + A-rich Low_complexity Low_complexity 1 40 0 6 1382 222 261 63 168 chr13 104539031 104539174 -15745138 - B4A SINE B4 -164 128 1 6 1382 596 253 154 39 chr13 104539856 104540115 -15744197 + B4A SINE B4 2 290 -2 6 1382 182 233 51 64 chr13 104540264 104540342 -15743970 + MIR SINE MIR 169 245 -17 6 1382 240 35 0 0 chr13 104540354 104540383 -15743929 + (T)n Simple_repeat Simple_repeat 1 29 0 6 1382 306 0 0 0 chr13 104540682 104540716 -15743596 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 6 1382 384 245 53 0 chr13 104540809 104540903 -15743409 + PB1D9 SINE Alu 1 99 -21 7 1382 262 288 0 0 chr13 104540919 104541047 -15743265 + GA-rich Low_complexity Low_complexity 1 128 0 7 1382 644 264 24 106 chr13 104542173 104542381 -15741931 + B4 SINE B4 11 201 -91 7 1382 294 279 0 0 chr13 104542602 104542760 -15741552 + CT-rich Low_complexity Low_complexity 2 159 0 7 1382 21 36 0 0 chr13 104543713 104543741 -15740571 + AT_rich Low_complexity Low_complexity 1 28 0 7 1382 228 295 77 0 chr13 104544257 104544335 -15739977 + MIRb SINE MIR 165 248 -20 7 1382 672 244 18 18 chr13 104544408 104544571 -15739741 - RSINE1 SINE B4 -1 164 2 7 1382 201 158 0 0 chr13 104544759 104544797 -15739515 + T-rich Low_complexity Low_complexity 1 38 0 7 1382 983 79 50 0 chr13 104544798 104544937 -15739375 - B1_Mus2 SINE Alu -1 146 1 7 1382 392 317 61 28 chr13 104545306 104545553 -15738759 - L1MA6 LINE L1 -38 6262 6008 7 1382 1401 81 0 3 chr13 104546223 104547208 -15737104 + (TCCA)n Simple_repeat Simple_repeat 1 981 0 8 1382 286 323 10 10 chr13 104547288 104547385 -15736927 - B1F2 SINE Alu -9 140 44 8 1382 25 51 0 0 chr13 104548012 104548051 -15736261 + AT_rich Low_complexity Low_complexity 1 39 0 8 1382 216 0 0 0 chr13 104548846 104548870 -15735442 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 8 1382 291 298 34 34 chr13 104549091 104549209 -15735103 + MIR3 SINE MIR 81 198 -10 8 1382 313 329 68 51 chr13 104550739 104550976 -15733336 + Lx8 LINE L1 7198 7438 -35 8 1382 41 0 0 0 chr13 104551419 104551460 -15732852 + AT_rich Low_complexity Low_complexity 1 41 0 8 1382 417 57 14 28 chr13 104551460 104551532 -15732780 - B1_Mm SINE Alu 0 147 77 8 1382 475 316 49 35 chr13 104551620 104551846 -15732466 + MER82 DNA MER2_type 8 236 -417 8 1382 426 298 86 30 chr13 104551907 104552104 -15732208 + MER82 DNA MER2_type 340 547 -106 8 1382 492 297 45 0 chr13 104552650 104552805 -15731507 - B3A SINE B2 -36 162 1 8 1382 22 0 0 0 chr13 104554168 104554190 -15730122 + AT_rich Low_complexity Low_complexity 1 22 0 9 1382 528 122 0 0 chr13 104554584 104554666 -15729646 + (A)n Simple_repeat Simple_repeat 1 82 0 9 1382 230 129 0 67 chr13 104556888 104556963 -15727349 + A-rich Low_complexity Low_complexity 4 73 0 9 1382 180 0 0 0 chr13 104558537 104558557 -15725755 + (A)n Simple_repeat Simple_repeat 1 20 0 9 1382 22 0 0 0 chr13 104558655 104558677 -15725635 + AT_rich Low_complexity Low_complexity 1 22 0 9 1382 217 167 21 0 chr13 104559889 104559937 -15724375 + A-rich Low_complexity Low_complexity 2 50 0 9 1382 476 264 187 0 chr13 104560155 104560274 -15724038 - B3A SINE B2 -6 192 45 9 1382 957 182 73 10 chr13 104560274 104560479 -15723833 - URR1B DNA MER1_type 0 225 8 9 1382 294 282 99 40 chr13 104561427 104561649 -15722663 + L1ME3A LINE L1 5938 6172 -1 9 1382 299 319 34 50 chr13 104561805 104561924 -15722388 - RSINE1 SINE B4 -8 157 41 9 1382 334 282 213 0 chr13 104561991 104562165 -15722147 + B4A SINE B4 52 262 -30 1 1382 445 159 181 8 chr13 104563152 104563279 -15721033 - B1_Mur3 SINE Alu 0 149 1 1 1382 195 42 0 0 chr13 104564006 104564030 -15720282 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1382 3332 136 29 4 chr13 104565340 104565827 -15718485 - RLTR19 LTR ERVK 0 499 1 1 1382 1270 49 0 0 chr13 104565859 104566003 -15718309 + B1_Mus1 SINE Alu 5 148 0 1 1382 288 296 128 9 chr13 104566078 104566187 -15718125 + ID_B1 SINE B4 6 127 -97 1 1382 209 108 27 0 chr13 104566189 104566226 -15718086 + (TGGA)n Simple_repeat Simple_repeat 4 41 0 1 1382 244 329 40 33 chr13 104566228 104566379 -15717933 + Charlie1a DNA MER1_type 150 301 -1154 1 1382 573 236 53 30 chr13 104566403 104566534 -15717778 - B1_Mur1 SINE Alu 0 149 16 1 1382 1463 71 28 0 chr13 104566603 104566785 -15717527 + B2_Mm2 SINE B2 3 189 -6 1 1382 1160 59 0 0 chr13 104566788 104566923 -15717389 - B1_Mus1 SINE Alu -11 137 3 1 1382 192 317 12 24 chr13 104567042 104567126 -15717186 - L2 LINE L2 -622 2797 2715 1 1382 298 253 110 0 chr13 104567334 104567425 -15716887 - MER5A DNA MER1_type -60 129 29 1 1382 219 329 0 0 chr13 104567746 104567822 -15716490 + PB1D10 SINE Alu 42 117 0 1 1382 246 257 54 62 chr13 104568197 104568309 -15716003 - L1MC LINE L1 -2155 3991 3881 1 1382 289 283 39 110 chr13 104568427 104568531 -15715781 - PB1D9 SINE Alu -2 118 24 1 1382 3312 174 184 86 chr13 104568531 104569248 -15715064 + RMER19B LTR ERVK 1 788 -114 1 1382 204 40 0 0 chr13 104569248 104569273 -15715039 + (TCCCC)n Simple_repeat Simple_repeat 5 29 0 1 1382 3312 174 184 86 chr13 104569273 104569377 -15714935 + RMER19B LTR ERVK 789 901 -1 1 1382 289 283 39 110 chr13 104569377 104569399 -15714913 - PB1D9 SINE Alu -97 23 1 1 1382 535 283 59 96 chr13 104569518 104569737 -15714575 + B3 SINE B2 6 216 0 1 1382 511 265 43 74 chr13 104569779 104569942 -15714370 - RSINE1 SINE B4 -2 163 6 1 1382 597 98 78 0 chr13 104569972 104570074 -15714238 - URR1B DNA MER1_type 0 225 116 1 1382 727 246 26 31 chr13 104570092 104570285 -15714027 - MTD LTR MaLR -186 233 42 1 1382 310 289 226 9 chr13 104570520 104570635 -15713677 - LTR41 LTR ERVL -615 153 14 1 1382 772 241 30 30 chr13 104570700 104570897 -15713415 + B3A SINE B2 1 197 -1 1 1382 180 143 0 0 chr13 104571135 104571177 -15713135 + (TTTTTG)n Simple_repeat Simple_repeat 5 46 0 1 1382 944 94 0 0 chr13 104571177 104571304 -15713008 - B1_Mm SINE Alu -20 127 1 1 1382 279 0 0 0 chr13 104571390 104571421 -15712891 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1 1382 1288 234 33 48 chr13 104571473 104571810 -15712502 - MTE2a LTR MaLR -8 371 40 1 1382 214 171 0 0 chr13 104572223 104572264 -15712048 + T-rich Low_complexity Low_complexity 2 42 0 1 1382 598 288 33 28 chr13 104572391 104572602 -15711710 - B3 SINE B2 -2 214 3 1 1382 332 328 9 0 chr13 104572604 104572720 -15711592 - PB1D10 SINE Alu 0 117 1 1 1382 670 213 182 69 chr13 104572895 104573331 -15710981 - RMER4B LTR ERVK -11 455 20 1 1382 838 181 14 20 chr13 104573341 104573488 -15710824 + B1_Mus2 SINE Alu 2 147 0 1 1382 647 259 61 108 chr13 104573840 104574135 -15710177 + B4A SINE B4 2 282 -10 1 1382 705 151 20 0 chr13 104574269 104574421 -15709891 + CT-rich Low_complexity Low_complexity 1 155 0 1 1382 744 193 148 42 chr13 104574421 104574610 -15709702 + ORR1D1 LTR MaLR 166 374 0 1 1382 1278 55 0 0 chr13 104574688 104574834 -15709478 - B1_Mus2 SINE Alu 0 147 2 1 1382 1545 78 5 0 chr13 104574836 104575027 -15709285 - B2_Mm1t SINE B2 -1 192 1 1 1382 586 194 132 0 chr13 104575212 104575341 -15708971 - B1_Mus2 SINE Alu -1 146 1 1 1382 1810 278 113 21 chr13 104575364 104576438 -15707874 - Lx9 LINE L1 -146 7498 6327 1 1382 3350 229 26 34 chr13 104576538 104577539 -15706773 - Lx9 LINE L1 -1592 6052 5016 1 1382 1000 161 23 18 chr13 104577542 104577713 -15706599 + B2_Mm2 SINE B2 2 173 -22 1 1382 189 0 0 0 chr13 104577719 104577740 -15706572 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1 1382 183 80 0 0 chr13 104577783 104577808 -15706504 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1382 8150 39 0 0 chr13 104578119 104579071 -15705241 - L1Md_T LINE L1 -2 6580 5629 1 1382 1581 43 0 0 chr13 104579068 104579254 -15705058 + L1Md_F2 LINE L1 6127 6312 -270 1 1382 4614 46 2 0 chr13 104579270 104579818 -15704494 + L1Md_F2 LINE L1 5587 6135 -447 1 1382 686 247 15 20 chr13 104579819 104580017 -15704295 - Lx9 LINE L1 -860 4987 4791 1 1382 2191 262 51 41 chr13 104580014 104580863 -15703449 + Lx9 LINE L1 3915 4771 -1076 1 1382 770 86 0 8 chr13 104580864 104580981 -15703331 + (TTCTC)n Simple_repeat Simple_repeat 5 120 0 1 1382 684 200 98 17 chr13 104580989 104581162 -15703150 - RMER10A LTR ERVL -45 397 211 1 1382 634 180 87 36 chr13 104581165 104581303 -15703009 - B1_Mm SINE Alu -2 145 1 1 1382 920 120 0 7 chr13 104581556 104581707 -15702605 + (TTCC)n Simple_repeat Simple_repeat 3 152 0 1 1382 608 200 26 17 chr13 104581707 104581824 -15702488 - PB1D9 SINE Alu -2 118 1 1 1382 914 9 0 18 chr13 104582037 104582149 -15702163 + (TTTC)n Simple_repeat Simple_repeat 2 111 0 1 1382 1001 70 0 0 chr13 104582159 104582288 -15702024 - B2_Mm2 SINE B2 -66 129 1 1 1382 746 277 85 0 chr13 104582332 104582509 -15701803 - B3A SINE B2 -6 192 1 1 1382 28 0 0 0 chr13 104582520 104582548 -15701764 + AT_rich Low_complexity Low_complexity 1 28 0 1 1382 309 270 11 33 chr13 104582587 104582679 -15701633 + RSINE1 SINE B4 3 92 -73 1 1382 1413 75 11 0 chr13 104582703 104582877 -15701435 + B2_Mm1t SINE B2 4 179 -14 1 1382 413 104 316 15 chr13 104582890 104583001 -15701311 + B2_Mm2 SINE B2 47 194 -1 1 1382 1139 234 5 0 chr13 104583938 104584147 -15700165 - B3 SINE B2 -5 211 2 1 1382 655 247 60 0 chr13 104585207 104585357 -15698955 + LSU-rRNA_Hsa rRNA rRNA 4535 4693 -342 1 1382 311 279 35 88 chr13 104585364 104585478 -15698834 + LSU-rRNA_Hsa rRNA rRNA 4046 4153 -882 1 1382 346 191 80 87 chr13 104585600 104585738 -15698574 - L1M3 LINE L1 -2352 3788 3652 1 1382 321 333 26 17 chr13 104585743 104585859 -15698453 - L1ME2 LINE L1 -57 6107 5991 1 1382 216 130 0 0 chr13 104586061 104586107 -15698205 + (T)n Simple_repeat Simple_repeat 1 46 0 1 1382 1190 89 0 0 chr13 104586156 104586302 -15698010 - B1_Mus1 SINE Alu -2 146 1 1 1382 324 280 0 0 chr13 104587048 104587123 -15697189 + PB1D10 SINE Alu 27 101 -16 1 1382 6185 75 30 6 chr13 104587273 104588883 -15695429 - L1VL2 LINE L1 -1789 1826 175 1 1382 337 326 48 68 chr13 104588903 104588929 -15695383 - L1MEg LINE L1 -4804 1280 1257 1 1382 1305 41 0 0 chr13 104588929 104589076 -15695236 - B1_Mus2 SINE Alu 0 147 1 1 1382 337 326 48 68 chr13 104589076 104589299 -15695013 - L1MEg LINE L1 -4828 1256 1036 1 1382 230 293 33 0 chr13 104589657 104589757 -15694555 + CT-rich Low_complexity Low_complexity 1 103 0 1 1382 876 293 94 51 chr13 104590133 104590547 -15693765 + MT2A LTR ERVL 101 532 -1 1 1382 28 0 0 0 chr13 104591225 104591253 -15693059 + AT_rich Low_complexity Low_complexity 1 28 0 1 1382 906 94 209 26 chr13 104591253 104591406 -15692906 - B2_Mm2 SINE B2 -14 181 1 1 1382 1296 73 67 6 chr13 104591536 104591716 -15692596 - B2_Mm1a SINE B2 0 193 3 1 1382 376 283 18 70 chr13 104591771 104591885 -15692427 - MLT1C LTR MaLR -2 465 358 1 1382 188 170 43 0 chr13 104591974 104592021 -15692291 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 1 1382 421 231 66 33 chr13 104592044 104592165 -15692147 - MLT1C LTR MaLR -338 129 5 1 1382 258 318 113 8 chr13 104592294 104592427 -15691885 + L2a LINE L2 3277 3423 -3 1 1382 2032 184 11 29 chr13 104592509 104592890 -15691422 - ORR1D1 LTR MaLR 0 374 1 1 1382 493 291 69 6 chr13 104592943 104593102 -15691210 - MER3 DNA MER1_type 0 209 41 1 1382 569 293 12 35 chr13 104593180 104593350 -15690962 - B3A SINE B2 -32 166 1 1 1382 424 284 0 0 chr13 104594262 104594350 -15689962 + RSINE1 SINE B4 3 90 -75 1 1382 198 0 0 0 chr13 104594407 104594429 -15689883 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1382 242 233 0 0 chr13 104594558 104594601 -15689711 + ID_B1 SINE B4 82 124 -100 1 1382 235 215 317 37 chr13 104594601 104594640 -15689672 + PB1D7 SINE Alu 1 105 -15 1 1382 268 331 104 54 chr13 104594714 104594973 -15689339 + B4 SINE B4 3 274 -18 1 1383 1203 218 22 125 chr13 104595706 104596026 -15688286 - B4 SINE B4 -5 287 1 1 1383 27 29 0 0 chr13 104596252 104596286 -15688026 + AT_rich Low_complexity Low_complexity 1 34 0 1 1383 239 237 17 0 chr13 104596899 104596958 -15687354 + CT-rich Low_complexity Low_complexity 3 62 0 1 1383 415 255 128 0 chr13 104597121 104597215 -15687097 - PB1D7 SINE Alu -1 119 14 1 1383 24 0 0 29 chr13 104597254 104597273 -15687039 + AT_rich Low_complexity Low_complexity 1 19 0 1 1383 770 192 20 20 chr13 104597273 104597422 -15686890 - B1_Mur4 SINE Alu 0 150 2 1 1383 24 0 0 29 chr13 104597422 104597437 -15686875 + AT_rich Low_complexity Low_complexity 1 15 0 1 1383 1734 221 72 24 chr13 104598347 104598832 -15685480 + ORR1D1-int LTR MaLR 807 1360 -10 1 1383 1283 212 106 43 chr13 104598834 104599136 -15685176 + ORR1D1 LTR MaLR 3 328 -46 1 1383 3819 20 117 26 chr13 104599136 104599588 -15684724 + MT2_Mm LTR ERVL 1 493 0 1 1383 1283 212 106 43 chr13 104599588 104599635 -15684677 + ORR1D1 LTR MaLR 329 374 0 1 1383 963 47 158 0 chr13 104599675 104599802 -15684510 - B1_Mus1 SINE Alu 0 148 2 1 1383 755 254 133 5 chr13 104599812 104600099 -15684213 - L1M4c LINE L1 -559 6469 6118 1 1383 465 271 147 6 chr13 104600217 104600418 -15683894 - L1M4c LINE L1 -1935 5065 4844 1 1383 709 265 106 32 chr13 104600422 104600668 -15683644 - B4A SINE B4 -14 278 15 1 1383 233 254 36 0 chr13 104600889 104600944 -15683368 - RMER15 LTR ERVL -113 462 406 1 1383 415 271 8 8 chr13 104600954 104601073 -15683239 - Lx8 LINE L1 -368 7105 6987 1 1383 364 209 200 0 chr13 104601068 104601183 -15683129 - L1M4c LINE L1 -2401 4605 4468 1 1383 411 160 284 11 chr13 104601186 104601281 -15683031 - B1F2 SINE Alu -5 144 24 1 1383 572 282 75 63 chr13 104601319 104601478 -15682834 - RSINE1 SINE B4 0 165 5 2 1383 503 260 40 17 chr13 104601479 104601655 -15682657 - L1M4c LINE L1 -2527 4473 4294 1 1383 216 0 0 0 chr13 104601655 104601679 -15682633 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1383 261 189 5 3 chr13 104601679 104601747 -15682565 + B1_Mus2 SINE Alu 1 65 -55 2 1383 4927 66 16 7 chr13 104601781 104602387 -15681925 - L1Md_F2 LINE L1 -2 6580 5969 2 1383 772 158 308 24 chr13 104602866 104603119 -15681193 + ORR1D1 LTR MaLR 45 369 -5 2 1383 310 297 183 11 chr13 104603136 104603415 -15680897 - L1M4c LINE L1 -3444 3556 3230 1 1383 272 265 108 39 chr13 104603579 104603681 -15680631 - L1M4c LINE L1 -3830 3173 3065 1 1383 228 292 74 7 chr13 104603789 104603937 -15680375 - L1M4c LINE L1 -4105 2903 2746 1 1383 448 281 68 35 chr13 104604107 104604402 -15679910 - L1M4c LINE L1 -4869 2465 2104 1 1383 600 224 44 22 chr13 104604406 104604543 -15679769 - B1_Mus2 SINE Alu -7 140 1 2 1383 284 260 83 46 chr13 104604572 104604741 -15679571 - ID_B1 SINE B4 -7 217 8 2 1383 25 0 0 0 chr13 104604975 104605000 -15679312 + AT_rich Low_complexity Low_complexity 1 25 0 2 1383 481 306 52 0 chr13 104605012 104605146 -15679166 + RSINE1 SINE B4 3 143 -22 2 1383 239 234 39 177 chr13 104605326 104605396 -15678916 + B1_Mur4 SINE Alu 39 95 -55 2 1383 2151 85 43 64 chr13 104605396 104605723 -15678589 + L1_Mus3 LINE L1 6319 6638 0 2 1383 239 234 39 177 chr13 104605723 104605782 -15678530 + B1_Mur4 SINE Alu 96 150 0 2 1383 344 265 34 15 chr13 104605849 104605968 -15678344 + PB1D10 SINE Alu 2 126 -23 2 1383 211 26 0 95 chr13 104606193 104606235 -15678077 + (CCCCCT)n Simple_repeat Simple_repeat 6 43 0 2 1383 272 296 0 27 chr13 104606427 104606500 -15677812 + MER5A DNA MER1_type 13 83 -106 2 1383 920 256 24 28 chr13 104606752 104606965 -15677347 + B3 SINE B2 1 212 -4 2 1383 249 326 82 22 chr13 104607264 104607279 -15677033 + B4 SINE B4 74 216 -76 2 1383 300 254 158 17 chr13 104607279 104607399 -15676913 + B1F SINE Alu 3 139 -10 2 1383 230 246 163 41 chr13 104607289 104607412 -15676900 - YREP_Mm Unknown Unknown -1501 311 174 2 1383 1235 201 9 83 chr13 104607506 104607831 -15676481 + RLTR11A LTR ERVK 227 527 -1 2 1383 287 232 100 5 chr13 104607835 104607929 -15676383 + B3 SINE B2 88 216 0 2 1383 611 209 221 76 chr13 104607985 104608234 -15676078 - B4A SINE B4 -7 285 1 2 1383 464 342 12 12 chr13 104611017 104611177 -15673135 + RSINE1 SINE B4 4 163 -2 2 1383 499 219 188 0 chr13 104611360 104611488 -15672824 - B3 SINE B2 -64 152 1 2 1383 2413 87 3 78 chr13 104611619 104611992 -15672320 + RLTR10D LTR ERVK 1 345 -14 2 1383 1144 51 0 0 chr13 104612148 104612285 -15672027 - B1_Mus1 SINE Alu -11 137 1 2 1383 34 0 0 0 chr13 104612328 104612362 -15671950 + AT_rich Low_complexity Low_complexity 1 34 0 2 1383 29 47 0 0 chr13 104612829 104612872 -15671440 + AT_rich Low_complexity Low_complexity 1 43 0 2 1383 648 189 9 0 chr13 104614010 104614121 -15670191 - B1F2 SINE Alu -7 142 31 2 1383 323 272 67 10 chr13 104614127 104614231 -15670081 - B1F SINE Alu -8 141 32 2 1383 24 53 0 0 chr13 104615351 104615389 -15668923 + AT_rich Low_complexity Low_complexity 1 38 0 2 1383 717 106 57 25 chr13 104615434 104615570 -15668742 - B1_Mus2 SINE Alu 0 148 1 2 1383 21 0 0 0 chr13 104615580 104615601 -15668711 + AT_rich Low_complexity Low_complexity 1 21 0 2 1383 213 65 0 0 chr13 104616663 104616694 -15667618 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 2 1383 1068 63 28 0 chr13 104616696 104616839 -15667473 - B1_Mus1 SINE Alu 0 148 2 2 1383 386 348 37 37 chr13 104616868 104617032 -15667280 - RSINE1 SINE B4 0 165 2 2 1383 1058 125 13 0 chr13 104618622 104618774 -15665538 + B2_Mm2 SINE B2 1 154 -41 2 1383 222 37 0 0 chr13 104618775 104618802 -15665510 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 2 1383 22 70 0 0 chr13 104618911 104618954 -15665358 + AT_rich Low_complexity Low_complexity 1 43 0 2 1383 23 0 0 0 chr13 104619424 104619447 -15664865 + AT_rich Low_complexity Low_complexity 1 23 0 2 1383 26 0 0 0 chr13 104620918 104620944 -15663368 + AT_rich Low_complexity Low_complexity 1 26 0 2 1383 354 316 0 39 chr13 104620971 104621073 -15663239 - B3A SINE B2 -4 194 97 2 1383 261 190 165 47 chr13 104621323 104621370 -15662942 + CYRA11_Mm Unknown Y-chromosome 122 222 -395 2 1383 370 111 32 0 chr13 104621370 104621433 -15662879 - URR1B DNA MER1_type 0 225 161 2 1383 261 190 165 47 chr13 104621433 104621450 -15662862 + CYRA11_Mm Unknown Y-chromosome 223 263 -354 2 1383 288 0 0 0 chr13 104621464 104621496 -15662816 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1383 35 54 0 0 chr13 104622667 104622723 -15661589 + AT_rich Low_complexity Low_complexity 1 56 0 2 1383 397 235 58 10 chr13 104622791 104622894 -15661418 - PB1D7 SINE Alu -12 108 1 2 1383 1151 280 81 16 chr13 104626518 104626841 -15657471 + ORR1E LTR MaLR 5 348 -11 2 1383 560 279 139 29 chr13 104626853 104627097 -15657215 + ORR1E-int LTR MaLR 1 271 -1099 2 1383 1640 241 76 116 chr13 104627104 104627723 -15656589 + ORR1E-int LTR MaLR 776 1369 -1 2 1383 272 349 11 11 chr13 104627729 104627816 -15656496 + ORR1E LTR MaLR 119 205 -165 2 1383 339 221 25 25 chr13 104628146 104628225 -15656087 + ORR1E LTR MaLR 281 359 0 2 1383 2223 197 234 65 chr13 104628407 104629210 -15655102 + RMER21A LTR ERV1 1 939 -8 2 1383 558 232 99 13 chr13 104630008 104630168 -15654144 - B3A SINE B2 -6 210 45 2 1383 181 280 19 39 chr13 104631685 104631737 -15652575 + L4 LINE RTE 1059 1109 -920 2 1383 476 183 12 0 chr13 104632091 104632173 -15652139 + B3 SINE B2 6 88 -128 2 1383 527 264 33 13 chr13 104632241 104632382 -15651930 - B3 SINE B2 0 216 72 2 1383 490 285 44 0 chr13 104632382 104632519 -15651793 + B1F SINE Alu 1 143 -6 2 1383 501 248 140 64 chr13 104632570 104632884 -15651428 + L1MB7 LINE L1 5792 6129 -55 2 1383 329 194 68 27 chr13 104633087 104633161 -15651151 - ID4_ SINE ID -1 82 6 2 1383 1250 93 38 11 chr13 104634231 104634416 -15649896 - B2_Mm1t SINE B2 -3 190 1 2 1383 465 112 144 82 chr13 104634429 104634526 -15649786 - B1_Mus2 SINE Alu -36 111 9 2 1383 671 162 36 0 chr13 104634576 104634687 -15649625 - B1_Mus1 SINE Alu 0 148 34 2 1383 252 0 0 0 chr13 104635174 104635202 -15649110 + (TC)n Simple_repeat Simple_repeat 1 28 0 2 1383 195 69 0 0 chr13 104635202 104635230 -15649082 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1383 240 163 0 0 chr13 104635244 104635287 -15649025 + CT-rich Low_complexity Low_complexity 1 43 0 2 1383 1030 117 0 14 chr13 104635794 104635942 -15648370 + B1_Mur4 SINE Alu 5 150 0 2 1383 333 0 0 0 chr13 104636580 104636617 -15647695 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 1383 568 59 24 0 chr13 104636617 104636701 -15647611 + (CA)n Simple_repeat Simple_repeat 1 87 0 2 1383 307 278 372 0 chr13 104636880 104637014 -15647298 - ID_B1 SINE B4 -39 185 2 2 1383 775 178 63 48 chr13 104637063 104637252 -15647060 - B2_Mm2 SINE B2 0 195 4 2 1383 249 372 21 11 chr13 104637264 104637359 -15646953 - PB1D9 SINE Alu -7 113 18 2 1383 1051 110 6 12 chr13 104637491 104637657 -15646655 + B2_Mm2 SINE B2 1 165 -30 2 1383 576 0 0 0 chr13 104637658 104637722 -15646590 + (GA)n Simple_repeat Simple_repeat 1 64 0 2 1383 361 288 71 53 chr13 104637724 104637893 -15646419 + ID_B1 SINE B4 53 224 0 2 1383 296 320 0 71 chr13 104637930 104638014 -15646298 - RSINE1 SINE B4 -85 80 3 2 1383 413 200 200 0 chr13 104638837 104638937 -15645375 + B1_Mur1 SINE Alu 13 132 -17 2 1383 232 209 86 75 chr13 104639227 104639320 -15644992 + ORR1D2 LTR MaLR 23 116 -254 2 1383 195 69 0 0 chr13 104639645 104639674 -15644638 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1383 703 53 281 0 chr13 104639674 104639788 -15644524 - B1_Mus2 SINE Alu 0 147 2 2 1383 691 224 15 0 chr13 104639916 104640050 -15644262 - B3 SINE B2 -80 136 1 2 1383 400 180 300 0 chr13 104640252 104640352 -15643960 + B2_Mm2 SINE B2 1 130 -65 2 1383 3129 67 7 0 chr13 104641174 104641592 -15642720 + BGLII LTR ERVK 1 421 0 2 1383 1103 99 6 0 chr13 104641758 104641919 -15642393 + L1_Mus2 LINE L1 6405 6566 0 2 1383 27 29 0 0 chr13 104642725 104642759 -15641553 + AT_rich Low_complexity Low_complexity 1 34 0 2 1383 232 241 20 5 chr13 104643636 104643694 -15640618 + B1F2 SINE Alu 3 59 -88 2 1383 424 243 0 70 chr13 104643714 104643829 -15640483 + B1F2 SINE Alu 42 148 -1 2 1383 597 214 220 0 chr13 104644002 104644175 -15640137 + B3 SINE B2 1 211 -5 2 1383 324 245 106 0 chr13 104644202 104644296 -15640016 + L1MA8 LINE L1 5730 5833 -458 2 1383 321 248 143 7 chr13 104644359 104644513 -15639799 + L1MA8 LINE L1 5976 6150 -141 2 1383 369 0 0 0 chr13 104644779 104644820 -15639492 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1383 1703 185 37 31 chr13 104645641 104645993 -15638319 + ORR1B2 LTR MaLR 1 354 -13 2 1383 1747 119 57 13 chr13 104646379 104646678 -15637634 + ORR1B1 LTR MaLR 83 394 0 2 1383 28 48 0 0 chr13 104646940 104646982 -15637330 + AT_rich Low_complexity Low_complexity 1 42 0 2 1383 549 0 0 0 chr13 104648186 104648247 -15636065 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1383 700 247 127 15 chr13 104648258 104648517 -15635795 - B4 SINE B4 -4 288 1 2 1383 210 290 61 70 chr13 104648552 104648667 -15635645 + L2a LINE L2 3281 3394 -32 2 1383 22 35 0 0 chr13 104648721 104648750 -15635562 + AT_rich Low_complexity Low_complexity 1 29 0 2 1383 22 0 0 0 chr13 104649412 104649434 -15634878 + AT_rich Low_complexity Low_complexity 1 22 0 2 1383 297 0 0 0 chr13 104650587 104650620 -15633692 + (TC)n Simple_repeat Simple_repeat 2 34 0 2 1383 467 267 85 43 chr13 104650631 104650772 -15633540 - B3A SINE B2 -16 182 36 2 1383 1028 213 30 5 chr13 104651426 104651624 -15632688 + B3 SINE B2 12 214 -2 2 1383 284 0 28 0 chr13 104651814 104651850 -15632462 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 2 1383 924 214 27 27 chr13 104652603 104652786 -15631526 + B3 SINE B2 25 207 -9 2 1383 24 0 0 0 chr13 104652866 104652890 -15631422 + AT_rich Low_complexity Low_complexity 1 24 0 2 1383 621 234 152 0 chr13 104652910 104653055 -15631257 + B3 SINE B2 50 216 0 2 1383 22 0 0 0 chr13 104653068 104653090 -15631222 + AT_rich Low_complexity Low_complexity 1 22 0 2 1383 398 231 214 40 chr13 104654288 104654414 -15629898 + RSINE1 SINE B4 3 150 -15 3 1383 528 65 0 0 chr13 104655107 104655184 -15629128 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1383 348 64 0 0 chr13 104655184 104655231 -15629081 + (GA)n Simple_repeat Simple_repeat 1 47 0 3 1383 263 200 0 0 chr13 104655287 104655337 -15628975 - MTEb LTR MaLR 0 379 330 3 1383 28 0 0 0 chr13 104655709 104655737 -15628575 + AT_rich Low_complexity Low_complexity 1 28 0 3 1383 1787 158 98 0 chr13 104656045 104656393 -15627919 + ORR1B1 LTR MaLR 1 382 -12 3 1383 603 202 23 39 chr13 104656939 104657068 -15627244 + B1_Mur1 SINE Alu 22 148 -1 3 1383 232 70 0 44 chr13 104657125 104657170 -15627142 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 3 1383 562 188 91 105 chr13 104657185 104657328 -15626984 - B1_Mur4 SINE Alu 0 150 10 3 1383 21 36 0 0 chr13 104657339 104657367 -15626945 + AT_rich Low_complexity Low_complexity 1 28 0 3 1383 543 264 27 27 chr13 104657377 104657525 -15626787 - RSINE1 SINE B4 -2 163 16 3 1383 21 36 0 0 chr13 104658213 104658241 -15626071 + AT_rich Low_complexity Low_complexity 1 28 0 3 1383 348 24 0 0 chr13 104658660 104658701 -15625611 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1383 225 269 0 0 chr13 104658732 104658799 -15625513 + (CATA)n Simple_repeat Simple_repeat 2 68 0 3 1383 255 254 66 33 chr13 104659848 104659909 -15624403 + ID4_ SINE ID 21 83 0 3 1383 881 150 7 7 chr13 104660052 104660200 -15624112 - URR1A DNA MER1_type 0 226 79 3 1383 886 263 165 57 chr13 104660464 104660919 -15623393 + L1MB5 LINE L1 5485 5988 -186 3 1383 335 316 204 36 chr13 104661069 104661258 -15623054 + RMER15 LTR ERVL 306 538 -37 3 1383 201 39 0 0 chr13 104661258 104661284 -15623028 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1383 335 316 204 36 chr13 104661284 104661314 -15622998 + RMER15 LTR ERVL 539 562 -13 3 1383 1103 276 3 14 chr13 104661656 104661939 -15622373 + B4A SINE B4 2 281 -11 3 1383 326 353 77 49 chr13 104662006 104662253 -15622059 + L2 LINE L2 2145 2398 -1021 3 1383 252 247 78 0 chr13 104662312 104662389 -15621923 + L1_Rod LINE L1 5130 5212 -635 3 1383 480 305 217 5 chr13 104662487 104662879 -15621433 + L1_Mur3 LINE L1 5374 5848 -32 3 1383 420 246 109 42 chr13 104662926 104663045 -15621267 - B3 SINE B2 -4 212 86 3 1383 608 243 15 0 chr13 104663582 104663718 -15620594 - B1F SINE Alu -7 142 5 3 1383 534 283 15 20 chr13 104664590 104664743 -15619569 - B1F SINE Alu -1 148 1 3 1383 270 132 0 0 chr13 104664920 104664973 -15619339 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 3 1383 536 253 148 18 chr13 104664987 104665105 -15619207 + B4A SINE B4 102 233 -59 3 1383 667 220 28 7 chr13 104665105 104665247 -15619065 + B1_Mus2 SINE Alu 1 145 -2 3 1383 536 253 148 18 chr13 104665247 104665297 -15619015 + B4A SINE B4 234 291 -1 3 1383 391 245 19 10 chr13 104665501 104665604 -15618708 - PB1D9 SINE Alu -16 104 1 3 1383 705 295 101 52 chr13 104665843 104666251 -15618061 + MER90a LTR ERV1 46 473 -141 3 1383 338 200 39 26 chr13 104666346 104666423 -15617889 - B4 SINE B4 -209 83 6 3 1383 1361 182 75 15 chr13 104666878 104667146 -15617166 + MTD LTR MaLR 1 284 -135 3 1383 826 26 25 58 chr13 104667668 104667789 -15616523 + Lx3C LINE L1 6239 6355 -621 3 1383 300 202 52 82 chr13 104667975 104668110 -15616202 + RLTR43A LTR ERVK 201 331 -33 3 1383 252 0 0 0 chr13 104668110 104668138 -15616174 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 1383 3667 96 69 69 chr13 104668189 104668814 -15615498 + Lx3B LINE L1 6345 6969 -4 3 1383 210 167 0 0 chr13 104668831 104668867 -15615445 + A-rich Low_complexity Low_complexity 1 36 0 3 1383 180 0 0 0 chr13 104669051 104669071 -15615241 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 3 1383 852 245 71 10 chr13 104669071 104669269 -15615043 - B4 SINE B4 -79 213 4 3 1383 1079 221 135 21 chr13 104669297 104669630 -15614682 + ORR1D1 LTR MaLR 4 374 0 3 1383 315 0 0 0 chr13 104669912 104669947 -15614365 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1383 291 290 77 0 chr13 104670552 104670707 -15613605 + L1M2 LINE L1 3945 4111 -2029 3 1383 323 326 101 59 chr13 104670992 104671230 -15613082 + ORR1E LTR MaLR 3 250 -109 3 1383 2034 211 59 127 chr13 104671462 104672055 -15612257 + Lx9 LINE L1 6729 7327 -317 3 1383 741 226 7 0 chr13 104672055 104672192 -15612120 + B1_Mur2 SINE Alu 2 139 -10 3 1383 2034 211 59 127 chr13 104672192 104672346 -15611966 + Lx9 LINE L1 7328 7425 -219 3 1383 1135 48 0 52 chr13 104672380 104672535 -15611777 + B1_Mus2 SINE Alu 1 147 0 3 1383 42 20 0 0 chr13 104672611 104672660 -15611652 + AT_rich Low_complexity Low_complexity 1 49 0 3 1383 589 262 64 70 chr13 104672922 104673266 -15611046 + L1M2 LINE L1 4447 4788 -1355 3 1383 372 257 74 7 chr13 104673391 104673540 -15610772 + L1M2 LINE L1 5074 5232 -908 3 1383 984 268 80 36 chr13 104673558 104673972 -15610340 + L1MA7 LINE L1 5675 6106 -185 3 1383 489 274 9 9 chr13 104674866 104674980 -15609332 + PB1D7 SINE Alu 1 114 -6 3 1383 370 260 240 0 chr13 104675133 104675287 -15609025 - MER53 DNA hAT 0 193 3 3 1383 428 248 20 0 chr13 104675525 104675626 -15608686 + PB1D9 SINE Alu 5 107 -13 3 1383 238 250 63 32 chr13 104677287 104677382 -15606930 + MER96B DNA hAT 124 221 -196 3 1383 252 241 90 22 chr13 104678045 104678134 -15606178 - MER3 DNA MER1_type -6 203 109 3 1383 304 237 221 33 chr13 104678614 104678630 -15605682 - ID_B1 SINE B4 0 224 212 3 1383 234 0 0 0 chr13 104678630 104678656 -15605656 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 3 1383 394 223 117 0 chr13 104678656 104678759 -15605553 - PB1 SINE Alu -12 115 1 3 1383 437 248 64 32 chr13 104679141 104679266 -15605046 + B1_Mur1 SINE Alu 1 129 -20 3 1383 652 304 43 5 chr13 104679485 104679670 -15604642 - B3A SINE B2 -6 192 1 3 1383 260 221 103 35 chr13 104679831 104679976 -15604336 + L1MA6 LINE L1 6129 6283 -17 3 1383 252 313 89 94 chr13 104680053 104680233 -15604079 - LTR16E1 LTR ERVL -3 535 357 3 1383 444 53 40 0 chr13 104680783 104680859 -15603453 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 1383 211 333 0 0 chr13 104680885 104680936 -15603376 + ID SINE ID 26 76 -148 3 1383 254 306 0 0 chr13 104680939 104681001 -15603311 + polypurine Low_complexity Low_complexity 1 62 0 3 1383 538 276 149 31 chr13 104681067 104681295 -15603017 + B4A SINE B4 16 270 -22 3 1383 226 291 84 95 chr13 104681456 104681551 -15602761 + PB1D10 SINE Alu 2 95 -22 3 1383 225 350 38 0 chr13 104681941 104682021 -15602291 + PB1 SINE Alu 29 111 -16 3 1383 354 202 32 56 chr13 104682326 104682452 -15601860 + L1MB8 LINE L1 5172 5294 -852 3 1383 417 295 53 0 chr13 104682473 104682568 -15601744 + ID_B1 SINE B4 8 107 -117 3 1383 609 245 107 26 chr13 104682624 104682934 -15601378 + L1MB8 LINE L1 5274 5608 -566 3 1383 211 200 0 0 chr13 104682939 104682974 -15601338 + B1_Mur3 SINE Alu 2 36 -113 3 1383 236 232 0 55 chr13 104682962 104682980 -15601332 + ID_B1 SINE B4 155 222 -1 3 1383 314 75 37 19 chr13 104682980 104683034 -15601278 + B1_Mur4 SINE Alu 96 150 0 3 1383 243 0 0 0 chr13 104683074 104683101 -15601211 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1383 435 263 28 28 chr13 104683109 104683285 -15601027 + L1MB8 LINE L1 5702 5877 -301 3 1383 201 267 40 13 chr13 104684075 104684151 -15600161 + (CATA)n Simple_repeat Simple_repeat 3 80 0 3 1383 580 317 22 134 chr13 104684153 104684466 -15599846 + B4A SINE B4 1 278 -14 3 1383 1605 172 7 10 chr13 104685683 104685971 -15598341 + ORR1A1 LTR MaLR 1 287 -59 3 1383 7668 53 0 0 chr13 104685971 104687132 -15597180 + L1_Mus1 LINE L1 5385 6545 -22 3 1383 485 58 0 18 chr13 104687133 104687221 -15597091 + ORR1A1 LTR MaLR 274 384 0 3 1383 538 212 92 8 chr13 104687376 104687495 -15596817 + B3A SINE B2 22 150 -48 3 1383 1184 129 75 19 chr13 104687506 104687719 -15596593 + URR1B DNA MER1_type 1 225 0 3 1383 289 392 37 25 chr13 104688106 104688268 -15596044 + MER20B DNA MER1_type 367 530 -253 3 1383 188 220 39 20 chr13 104688321 104688372 -15595940 + MER5B DNA MER1_type 51 102 -76 3 1383 338 307 0 0 chr13 104688476 104688551 -15595761 - RSINE1 SINE B4 -90 75 1 3 1383 606 216 99 8 chr13 104688633 104688865 -15595447 - L1ME2 LINE L1 -113 6051 5795 3 1383 930 127 0 34 chr13 104689082 104689229 -15595083 + B1_Mur4 SINE Alu 1 142 -8 3 1383 225 128 0 0 chr13 104689245 104689292 -15595020 + (A)n Simple_repeat Simple_repeat 1 47 0 3 1383 528 45 0 0 chr13 104689564 104689631 -15594681 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1383 331 311 29 36 chr13 104689668 104689805 -15594507 - B1F SINE Alu -13 136 1 3 1383 462 291 66 7 chr13 104689994 104690146 -15594166 + RSINE1 SINE B4 3 163 -2 3 1383 811 239 109 5 chr13 104690180 104690390 -15593922 + B4A SINE B4 3 234 -58 3 1383 262 204 0 18 chr13 104690375 104690430 -15593882 + ID_B1 SINE B4 171 224 0 3 1383 257 305 20 69 chr13 104690696 104690798 -15593514 + MLT1F1 LTR MaLR 33 129 -440 3 1383 29668 73 30 1 chr13 104691020 104696144 -15588168 + L1Md_F2 LINE L1 315 5586 -297 3 1383 8379 35 3 1 chr13 104696144 104697137 -15587175 + L1Md_F2 LINE L1 5587 6581 -1 3 1383 242 227 114 0 chr13 104697201 104697289 -15587023 + L1MD1 LINE L1 6144 6241 -1 3 1383 937 197 44 8 chr13 104697401 104697652 -15586660 + L1_Rod LINE L1 4497 4756 -1091 3 1383 250 194 9 140 chr13 104697727 104697841 -15586471 + Lx2 LINE L1 6904 6996 -1 3 1383 1014 52 96 0 chr13 104697847 104697982 -15586330 + B1_Mus1 SINE Alu 1 148 0 3 1383 35 0 0 0 chr13 104697982 104698017 -15586295 + AT_rich Low_complexity Low_complexity 1 35 0 3 1383 430 232 138 0 chr13 104698187 104698325 -15585987 + L1MC2 LINE L1 6064 6220 -124 3 1383 1208 21 0 7 chr13 104698557 104698699 -15585613 + B1_Mm SINE Alu 1 141 -6 3 1383 189 0 0 0 chr13 104698701 104698722 -15585590 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 3 1383 180 0 0 0 chr13 104699353 104699373 -15584939 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1383 1109 68 0 20 chr13 104699389 104699539 -15584773 + B1_Mus1 SINE Alu 1 147 -1 4 1383 22 70 0 0 chr13 104699571 104699614 -15584698 + AT_rich Low_complexity Low_complexity 1 43 0 4 1383 219 295 51 13 chr13 104699700 104699716 -15584596 - BC1_Mm scRNA scRNA -65 87 7 4 1383 230 279 0 16 chr13 104699716 104699778 -15584534 - tRNA-Ala-GCY_ tRNA tRNA -14 61 1 4 1383 318 194 16 13 chr13 104699873 104699960 -15584352 + ID4_ SINE ID 28 112 -40 4 1383 390 323 0 0 chr13 104700077 104700170 -15584142 + RSINE1 SINE B4 73 165 0 4 1383 243 0 0 0 chr13 104700170 104700197 -15584115 + (CAGG)n Simple_repeat Simple_repeat 1 27 0 4 1383 291 150 0 0 chr13 104700230 104700290 -15584022 + (TC)n Simple_repeat Simple_repeat 1 60 0 4 1383 303 208 0 0 chr13 104700933 104700986 -15583326 + B4A SINE B4 163 215 -77 4 1383 441 0 0 0 chr13 104701022 104701071 -15583241 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1383 270 276 51 162 chr13 104701176 104701215 -15583097 + ID_B1 SINE B4 102 186 -38 4 1383 280 188 141 28 chr13 104701215 104701286 -15583026 + B1F SINE Alu 41 119 -30 4 1383 34 0 0 0 chr13 104701347 104701381 -15582931 + AT_rich Low_complexity Low_complexity 1 34 0 4 1383 811 172 14 7 chr13 104701382 104701528 -15582784 + B1_Mus1 SINE Alu 2 148 0 4 1383 30 27 0 0 chr13 104701583 104701620 -15582692 + AT_rich Low_complexity Low_complexity 1 37 0 4 1383 524 277 46 51 chr13 104701759 104701934 -15582378 + B4A SINE B4 1 174 -118 4 1383 408 88 0 0 chr13 104701936 104701993 -15582319 + (GAAA)n Simple_repeat Simple_repeat 2 58 0 4 1383 21 36 0 0 chr13 104702352 104702380 -15581932 + AT_rich Low_complexity Low_complexity 1 28 0 4 1383 841 148 0 60 chr13 104702464 104702615 -15581697 + B1_Mus1 SINE Alu 6 147 -1 4 1383 616 286 70 59 chr13 104703126 104703312 -15581000 + ID_B1 SINE B4 3 190 -34 4 1383 422 291 396 0 chr13 104703491 104703703 -15580609 + Tigger7 DNA MER2_type 41 336 -2155 4 1383 240 35 0 0 chr13 104703716 104703745 -15580567 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1383 1164 43 0 0 chr13 104703819 104703958 -15580354 + B1_Mus1 SINE Alu 2 140 -8 4 1383 216 0 0 0 chr13 104703958 104703982 -15580330 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 4 1383 424 246 65 65 chr13 104703995 104704009 -15580303 + B1F SINE Alu 2 140 -9 4 1383 525 268 16 16 chr13 104704009 104704134 -15580178 + ID_B1 SINE B4 91 215 -9 4 1383 354 218 110 44 chr13 104704138 104704229 -15580083 + Tigger7 DNA MER2_type 467 563 -1928 4 1383 21 0 0 0 chr13 104704300 104704321 -15579991 + AT_rich Low_complexity Low_complexity 1 21 0 4 1383 346 169 0 0 chr13 104704321 104704380 -15579932 + Tigger7 DNA MER2_type 549 607 -1884 4 1383 296 182 18 0 chr13 104704363 104704418 -15579894 + Tigger7 DNA MER2_type 2392 2447 -44 4 1383 26 0 0 0 chr13 104704894 104704920 -15579392 + AT_rich Low_complexity Low_complexity 1 26 0 4 1383 683 269 45 5 chr13 104705101 104705303 -15579009 + Charlie1a DNA MER1_type 999 1208 -247 4 1383 658 258 118 17 chr13 104705321 104705558 -15578754 + MER2 DNA MER2_type 26 286 -59 4 1383 1089 49 42 0 chr13 104706003 104706145 -15578167 - B1_Mus1 SINE Alu 0 148 1 4 1383 614 271 101 26 chr13 104706258 104706485 -15577827 + Tigger5 DNA MER2_type 2163 2406 0 4 1383 270 280 102 9 chr13 104706485 104706590 -15577722 - Tigger15a DNA TcMar -325 390 276 4 1383 22 35 0 0 chr13 104707219 104707248 -15577064 + AT_rich Low_complexity Low_complexity 1 29 0 4 1383 23 0 0 0 chr13 104707915 104707938 -15576374 + AT_rich Low_complexity Low_complexity 1 23 0 4 1383 200 97 32 0 chr13 104710290 104710321 -15573991 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 4 1383 25 83 0 0 chr13 104710661 104710721 -15573591 + GC_rich Low_complexity Low_complexity 1 60 0 4 1383 208 196 47 38 chr13 104710826 104710932 -15573380 + (CCGG)n Simple_repeat Simple_repeat 2 108 0 4 1383 26 64 0 0 chr13 104711046 104711093 -15573219 + GC_rich Low_complexity Low_complexity 1 47 0 4 1383 203 61 30 0 chr13 104711252 104711285 -15573027 + (CGG)n Simple_repeat Simple_repeat 3 36 0 4 1383 59 84 0 0 chr13 104711372 104711515 -15572797 + GC_rich Low_complexity Low_complexity 1 143 0 4 1383 336 24 0 0 chr13 104714218 104714259 -15570053 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1383 304 347 30 40 chr13 104714598 104714796 -15569516 - Tigger7 DNA MER2_type -4 2487 2292 4 1383 267 298 136 34 chr13 104714797 104714915 -15569397 + RSINE1 SINE B4 3 132 -33 4 1383 6482 79 39 1 chr13 104714915 104715857 -15568455 + L1_Mus3 LINE L1 5657 6634 -4 4 1383 230 225 0 0 chr13 104715857 104715897 -15568415 + B4 SINE B4 253 292 0 4 1383 213 39 0 0 chr13 104716098 104716124 -15568188 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1383 492 336 164 15 chr13 104716189 104716452 -15567860 - Tigger7 DNA MER2_type -2182 309 8 4 1383 1011 91 7 27 chr13 104718208 104718355 -15565957 - B1_Mur3 SINE Alu -1 148 5 4 1383 183 350 131 55 chr13 104718465 104718610 -15565702 + MIRc SINE MIR 75 230 -38 4 1383 209 100 50 0 chr13 104719125 104719165 -15565147 + (GAAAA)n Simple_repeat Simple_repeat 3 44 0 4 1383 28 0 0 0 chr13 104719202 104719230 -15565082 + AT_rich Low_complexity Low_complexity 1 28 0 4 1383 812 160 38 0 chr13 104719369 104719500 -15564812 + B1_Mus1 SINE Alu 1 136 -12 4 1383 35 83 0 0 chr13 104719556 104719640 -15564672 + AT_rich Low_complexity Low_complexity 1 84 0 4 1383 656 114 114 0 chr13 104719654 104719759 -15564553 + B1_Mur3 SINE Alu 31 147 -2 4 1383 415 211 0 13 chr13 104719924 104720001 -15564311 + ID4_ SINE ID 2 77 -6 4 1383 3021 6 5 85 chr13 104720024 104720423 -15563889 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1383 953 86 159 0 chr13 104720423 104720586 -15563726 + IAPEz-int LTR ERVK 8 196 -6285 4 172 51129 18 13 2 chr13 104720557 104726964 -15557348 + IAPEz-int LTR ERVK 67 6481 0 4 1384 3055 6 5 85 chr13 104726964 104727363 -15556949 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1384 1649 42 0 0 chr13 104727477 104727670 -15556642 + B2_Mm1a SINE B2 1 193 0 4 1384 225 65 0 0 chr13 104727862 104727893 -15556419 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1384 679 186 158 41 chr13 104727934 104728130 -15556182 + ID_B1 SINE B4 1 219 -5 4 1384 889 281 70 7 chr13 104728484 104728756 -15555556 + MER2 DNA MER2_type 38 326 -19 4 1384 1075 214 0 0 chr13 104729166 104729358 -15554954 + B3 SINE B2 1 192 -24 4 1384 209 283 0 0 chr13 104729364 104729380 -15554932 + A-rich Low_complexity Low_complexity 1 16 0 4 1384 1201 61 0 0 chr13 104729380 104729528 -15554784 + B1_Mus1 SINE Alu 1 148 0 4 1384 209 283 0 0 chr13 104729528 104729571 -15554741 + A-rich Low_complexity Low_complexity 17 59 0 4 1384 1357 75 31 21 chr13 104729599 104729790 -15554522 - B2_Mm2 SINE B2 0 195 3 4 1384 527 267 96 37 chr13 104729887 104730074 -15554238 - B3A SINE B2 0 198 1 4 1384 456 208 0 0 chr13 104730396 104730497 -15553815 + (TA)n Simple_repeat Simple_repeat 1 101 0 4 1384 599 214 7 30 chr13 104730608 104730743 -15553569 + ID_B1 SINE B4 93 224 0 4 1384 329 217 0 0 chr13 104730812 104730881 -15553431 + ID4 SINE ID 4 72 -11 4 1384 198 0 0 0 chr13 104731389 104731411 -15552901 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 4 1384 997 117 12 12 chr13 104731534 104731707 -15552605 + (TTTC)n Simple_repeat Simple_repeat 4 176 0 4 1384 353 269 78 50 chr13 104732023 104732164 -15552148 - B1F SINE Alu 0 149 5 4 1384 418 268 20 34 chr13 104732286 104732433 -15551879 - RSINE1 SINE B4 -17 148 4 4 1384 890 96 0 7 chr13 104733091 104733227 -15551085 + (GAA)n Simple_repeat Simple_repeat 2 136 0 4 1384 24 0 0 0 chr13 104733353 104733377 -15550935 + AT_rich Low_complexity Low_complexity 1 24 0 4 1384 830 145 13 27 chr13 104733379 104733528 -15550784 - B1_Mur3 SINE Alu -1 148 2 4 1384 24 32 0 0 chr13 104733817 104733848 -15550464 + AT_rich Low_complexity Low_complexity 1 31 0 4 1384 22 35 0 0 chr13 104733894 104733923 -15550389 + AT_rich Low_complexity Low_complexity 1 29 0 4 1384 275 311 11 0 chr13 104733957 104734047 -15550265 - RSINE1 SINE B4 -69 96 6 4 1384 609 263 11 26 chr13 104734863 104735054 -15549258 + B3A SINE B2 1 188 -10 4 1384 275 194 0 27 chr13 104735134 104735208 -15549104 + GA-rich Low_complexity Low_complexity 1 72 0 4 1384 262 236 112 16 chr13 104735237 104735306 -15549006 + L1MB4 LINE L1 6009 6081 -99 4 1384 244 0 56 0 chr13 104735306 104735342 -15548970 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 1384 262 236 112 16 chr13 104735342 104735397 -15548915 + L1MB4 LINE L1 6082 6145 -35 4 1384 365 359 54 68 chr13 104735448 104735801 -15548511 + ORR1E LTR MaLR 7 354 -5 4 1384 24 32 0 0 chr13 104736002 104736033 -15548279 + AT_rich Low_complexity Low_complexity 1 31 0 4 1384 3750 20 44 54 chr13 104737077 104737557 -15546755 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1384 6561 58 11 17 chr13 104737559 104738391 -15545921 - IAPEz-int LTR ERVK -2 6479 5653 4 1384 2636 82 0 3 chr13 104738386 104738729 -15545583 - IAPEz-int LTR ERVK -4781 1700 1359 4 1384 4668 88 9 39 chr13 104738729 104739403 -15544909 - IAPEz-int LTR ERVK -5819 662 9 4 1384 3538 24 41 113 chr13 104739404 104739916 -15544396 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1384 602 205 8 0 chr13 104739949 104740066 -15544246 + RSINE1 SINE B4 3 120 -45 4 1384 428 234 15 146 chr13 104740117 104740148 -15544164 - B2_Mm2 SINE B2 -10 185 165 4 1384 394 49 33 0 chr13 104740148 104740209 -15544103 + (TG)n Simple_repeat Simple_repeat 2 64 0 4 1384 739 234 15 146 chr13 104740209 104740382 -15543930 - B3A SINE B2 -16 182 8 4 1384 358 281 22 11 chr13 104740416 104740506 -15543806 + PB1D10 SINE Alu 2 92 -25 4 1384 527 234 16 24 chr13 104740429 104740556 -15543756 + ID_B1 SINE B4 98 223 -1 4 1384 398 301 96 0 chr13 104741166 104741332 -15542980 - MER20 DNA MER1_type -2 217 36 4 1384 580 209 52 0 chr13 104741949 104742083 -15542229 - ID_B1 SINE B4 -2 222 82 4 1384 669 25 0 0 chr13 104742242 104742321 -15541991 + (GA)n Simple_repeat Simple_repeat 1 79 0 4 1384 384 314 21 0 chr13 104742334 104742474 -15541838 - L1ME3A LINE L1 -163 6010 5868 4 1384 431 233 0 32 chr13 104742564 104742649 -15541663 + PB1D9 SINE Alu 26 110 -10 4 1384 324 0 0 0 chr13 104742649 104742685 -15541627 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1384 283 315 0 0 chr13 104742777 104742850 -15541462 - PB1 SINE Alu -27 100 28 4 1384 23 0 0 0 chr13 104742885 104742908 -15541404 + AT_rich Low_complexity Low_complexity 1 23 0 4 1384 314 291 25 0 chr13 104743500 104743579 -15540733 + C-rich Low_complexity Low_complexity 5 85 0 5 1384 235 216 0 19 chr13 104743594 104743646 -15540666 - ID_B1 SINE B4 -31 193 143 5 1384 182 326 58 36 chr13 104743742 104743879 -15540433 + L3 LINE CR1 3771 3910 -579 5 1384 350 294 73 0 chr13 104744305 104744414 -15539898 - PB1D7 SINE Alu 0 120 4 5 1384 709 176 89 7 chr13 104745246 104745417 -15538895 - L1M2 LINE L1 -2528 5467 5279 5 1384 553 264 167 21 chr13 104745419 104745605 -15538707 - B3 SINE B2 -2 214 2 5 1384 728 99 0 9 chr13 104746243 104746355 -15537957 + (TCC)n Simple_repeat Simple_repeat 2 112 0 5 1384 239 339 72 18 chr13 104746356 104746467 -15537845 - B1F SINE Alu -15 134 18 5 1384 446 289 18 148 chr13 104746489 104746712 -15537600 - B3A SINE B2 0 195 2 5 1384 345 343 86 41 chr13 104747105 104747763 -15536549 + L2c LINE L2 2650 3340 -47 5 1384 673 136 11 33 chr13 104748066 104748249 -15536063 + (TG)n Simple_repeat Simple_repeat 1 179 0 5 1384 824 254 137 0 chr13 104748250 104748506 -15535806 - B4 SINE B4 0 292 2 5 1384 285 208 189 0 chr13 104748770 104748876 -15535436 - MT2A LTR ERVL -1 532 407 5 1384 286 350 0 0 chr13 104748926 104749046 -15535266 - L2c LINE L2 -228 3159 3040 5 1384 245 265 28 38 chr13 104749953 104750059 -15534253 - MIR SINE MIR -71 137 33 5 1384 285 146 0 0 chr13 104750422 104750470 -15533842 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1384 294 237 53 0 chr13 104750621 104750697 -15533615 - PB1D9 SINE Alu -7 113 34 5 1384 216 0 0 0 chr13 104751009 104751033 -15533279 + (TCTA)n Simple_repeat Simple_repeat 1 24 0 5 1384 269 118 20 0 chr13 104751037 104751088 -15533224 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1384 21 0 0 0 chr13 104751403 104751424 -15532888 + AT_rich Low_complexity Low_complexity 1 21 0 5 1384 2336 139 50 13 chr13 104752152 104752532 -15531780 + ORR1B1 LTR MaLR 1 394 0 5 1384 420 198 20 10 chr13 104753030 104753132 -15531180 + PB1D9 SINE Alu 18 120 0 5 1384 428 231 0 0 chr13 104754037 104754128 -15530184 + B3 SINE B2 1 91 -125 5 1384 369 0 0 0 chr13 104754382 104754423 -15529889 + (CA)n Simple_repeat Simple_repeat 2 42 0 5 1384 312 27 0 0 chr13 104754423 104754459 -15529853 + (GA)n Simple_repeat Simple_repeat 2 38 0 5 1384 753 176 15 0 chr13 104754752 104754888 -15529424 + B1_Mur1 SINE Alu 5 142 -7 5 1384 536 310 161 36 chr13 104755348 104755581 -15528731 + B4 SINE B4 4 269 -23 5 1384 414 57 0 0 chr13 104755581 104755634 -15528678 + (CA)n Simple_repeat Simple_repeat 2 54 0 5 1384 536 310 161 36 chr13 104755634 104755648 -15528664 + B4 SINE B4 270 282 -10 5 1384 1728 126 95 0 chr13 104755870 104756164 -15528148 + ORR1B1 LTR MaLR 4 325 -69 5 1384 245 273 30 0 chr13 104756321 104756387 -15527925 + LTR16A LTR ERVL 382 449 -2 5 1384 599 110 0 0 chr13 104757566 104757657 -15526655 - URR1B DNA MER1_type 0 225 135 5 1384 527 175 132 0 chr13 104757794 104757908 -15526404 - URR1B DNA MER1_type -97 128 1 5 1384 212 204 0 85 chr13 104758661 104758720 -15525592 + PB1D10 SINE Alu 64 117 0 5 1384 239 295 11 11 chr13 104758887 104758976 -15525336 + L1ME3 LINE L1 6006 6094 -68 5 1384 834 177 0 0 chr13 104759018 104759176 -15525136 + (TA)n Simple_repeat Simple_repeat 2 159 0 5 1384 396 291 27 0 chr13 104759201 104759311 -15525001 - B1_Mur1 SINE Alu -32 117 5 5 1384 448 188 59 0 chr13 104759342 104759443 -15524869 - B1F1 SINE Alu -34 115 9 5 1384 224 218 55 0 chr13 104759394 104759449 -15524863 - B4A SINE B4 -147 145 88 5 1384 482 58 0 28 chr13 104759462 104759533 -15524779 - L1Md_F2 LINE L1 -12 6570 6502 5 1384 2333 39 4 0 chr13 104759535 104759815 -15524497 + L1Md_F2 LINE L1 6253 6533 -49 5 1384 837 180 0 0 chr13 104760990 104761157 -15523155 + CT-rich Low_complexity Low_complexity 3 169 0 5 1384 365 70 0 17 chr13 104761250 104761308 -15523004 + (TG)n Simple_repeat Simple_repeat 1 57 0 5 1384 704 224 98 0 chr13 104761308 104761451 -15522861 - B3 SINE B2 -59 157 1 5 1384 654 110 0 0 chr13 104761528 104761628 -15522684 - B1_Mus2 SINE Alu -4 143 44 5 1384 226 189 77 51 chr13 104761567 104761645 -15522667 - RLTR25B LTR ERVK -519 509 430 5 1384 436 282 0 139 chr13 104761663 104761743 -15522569 - B1F SINE Alu -6 143 66 5 1384 1188 188 9 14 chr13 104761743 104761954 -15522358 - B3 SINE B2 -4 212 3 5 1384 436 282 0 139 chr13 104761954 104762038 -15522274 - B1F SINE Alu -84 65 2 5 1384 392 306 61 0 chr13 104762190 104762337 -15521975 - RMER15 LTR ERVL -65 510 355 5 1384 311 326 209 4 chr13 104763042 104763301 -15521011 - LTR16A LTR ERVL -17 434 123 5 1384 269 277 98 40 chr13 104763308 104763481 -15520831 - L1M5 LINE L1 -1279 4867 4685 5 1384 768 237 38 24 chr13 104763482 104763694 -15520618 - B3 SINE B2 0 216 2 5 1384 213 333 119 15 chr13 104763697 104763831 -15520481 - B1F SINE Alu -1 148 1 5 1384 279 0 0 0 chr13 104763838 104763869 -15520443 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 5 1384 841 210 74 15 chr13 104764514 104764717 -15519595 - B3 SINE B2 -1 215 1 5 1384 321 169 0 0 chr13 104765882 104765941 -15518371 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 5 1384 216 0 0 0 chr13 104765941 104765965 -15518347 + (GA)n Simple_repeat Simple_repeat 2 25 0 5 1384 728 53 21 11 chr13 104765997 104766092 -15518220 + L1_Mus2 LINE L1 6157 6252 -314 5 1384 615 112 0 9 chr13 104766093 104766201 -15518111 + L1_Mus3 LINE L1 6532 6638 0 5 1384 21 57 0 0 chr13 104766244 104766279 -15518033 + AT_rich Low_complexity Low_complexity 1 35 0 5 1384 28 29 0 0 chr13 104767126 104767161 -15517151 + AT_rich Low_complexity Low_complexity 1 35 0 5 1384 204 281 0 17 chr13 104768298 104768356 -15515956 + CT-rich Low_complexity Low_complexity 3 59 0 5 1384 265 306 0 0 chr13 104768805 104768877 -15515435 - MER63D DNA AcHobo -989 72 1 5 1384 568 172 20 0 chr13 104768905 104769004 -15515308 + PB1D10 SINE Alu 10 110 -7 5 1384 1136 127 193 0 chr13 104769209 104769390 -15514922 + B3 SINE B2 1 216 0 5 1384 1977 117 37 40 chr13 104769753 104770128 -15514184 + RMER4A LTR ERVK 18 391 -75 5 1384 217 135 0 37 chr13 104770128 104770182 -15514130 + CT-rich Low_complexity Low_complexity 2 53 0 5 1384 598 157 52 0 chr13 104770206 104770321 -15513991 + RMER4A LTR ERVK 346 466 0 5 1384 231 318 62 104 chr13 104770905 104771098 -15513214 + MLT1K LTR MaLR 6 190 -405 5 1384 391 298 51 32 chr13 104771543 104771699 -15512613 + RSINE1 SINE B4 3 161 -4 5 1384 1132 176 42 8 chr13 104771887 104772128 -15512184 - ORR1C2 LTR MaLR -4 380 132 5 1384 966 171 60 0 chr13 104772547 104772746 -15511566 + B3 SINE B2 2 212 -4 5 1384 1223 41 0 7 chr13 104773109 104773257 -15511055 + B1_Mus1 SINE Alu 2 148 0 5 1384 330 230 54 0 chr13 104773291 104773365 -15510947 + B1F SINE Alu 9 86 -63 5 1384 305 215 31 51 chr13 104774006 104774104 -15510208 + MLT1A1 LTR MaLR 313 408 0 5 1384 23 0 0 0 chr13 104774128 104774151 -15510161 + AT_rich Low_complexity Low_complexity 1 23 0 5 1384 183 80 0 0 chr13 104774164 104774189 -15510123 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 5 1384 295 261 70 28 chr13 104774202 104774273 -15510039 - ID4 SINE ID -8 75 2 5 1384 844 111 73 7 chr13 104774429 104774565 -15509747 + B1_Mur4 SINE Alu 5 149 -1 5 1384 1068 101 6 6 chr13 104774809 104774969 -15509343 + B2_Mm1a SINE B2 1 160 -33 5 1384 180 0 0 0 chr13 104774969 104774989 -15509323 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5 1384 1133 65 0 0 chr13 104775468 104775607 -15508705 + B1_Mus2 SINE Alu 1 139 -8 5 1384 236 243 85 21 chr13 104775849 104775956 -15508356 + L2a LINE L2 3256 3376 -50 5 1384 554 203 36 29 chr13 104776185 104776322 -15507990 + ID_B1 SINE B4 85 222 -2 5 1384 389 311 73 36 chr13 104776331 104776551 -15507761 - MLT2B3 LTR ERVL -60 494 267 5 1384 201 102 60 20 chr13 104776690 104776740 -15507572 + CT-rich Low_complexity Low_complexity 3 54 0 5 1384 296 306 61 43 chr13 104776797 104776961 -15507351 - AmnSINE1 SINE SINE -168 407 241 5 1384 475 167 350 24 chr13 104776978 104777101 -15507211 + RSINE1 SINE B4 3 165 0 5 1384 24 0 0 0 chr13 104777113 104777137 -15507175 + AT_rich Low_complexity Low_complexity 1 24 0 5 1384 433 292 69 0 chr13 104777148 104777278 -15507034 + RSINE1 SINE B4 12 150 -15 5 1384 25 0 0 0 chr13 104777300 104777325 -15506987 + AT_rich Low_complexity Low_complexity 1 25 0 5 1384 810 43 0 0 chr13 104777503 104777618 -15506694 + B1_Mus1 SINE Alu 2 116 -32 5 1384 1391 177 53 0 chr13 104778164 104778429 -15505883 - ORR1B1-int LTR MaLR -412 1097 819 5 1384 1911 145 75 3 chr13 104778433 104778793 -15505519 - ORR1B1 LTR MaLR -8 386 1 5 1384 2327 196 71 22 chr13 104778797 104779454 -15504858 - ORR1B1-int LTR MaLR -684 686 1 5 1384 1055 135 99 0 chr13 104779454 104779646 -15504666 - ORR1B1 LTR MaLR 0 384 174 5 1384 341 198 12 0 chr13 104779672 104779753 -15504559 + GA-rich Low_complexity Low_complexity 3 84 0 5 1384 688 155 61 40 chr13 104779753 104779901 -15504411 - ORR1B1 LTR MaLR -199 185 35 5 1384 226 167 0 23 chr13 104779902 104779945 -15504367 - RLTR31_Mur LTR ERVK 0 553 512 5 1384 1518 248 25 25 chr13 104779940 104780382 -15503930 - RLTR17 LTR ERVK -85 607 166 5 1384 286 202 77 85 chr13 104780367 104780497 -15503815 - RLTR17 LTR ERVK -459 233 105 5 1384 234 103 0 0 chr13 104780504 104780543 -15503769 - ORR1B1 LTR MaLR -345 39 1 5 1384 267 250 20 50 chr13 104780546 104780647 -15503665 + MER92B LTR ERV1 538 635 -1 5 1384 762 144 0 0 chr13 104780757 104780937 -15503375 + (CAG)n Simple_repeat Simple_repeat 1 180 0 5 1384 686 150 0 11 chr13 104780960 104781037 -15503275 + polypurine Low_complexity Low_complexity 1 77 0 5 1384 831 134 0 0 chr13 104781037 104781216 -15503096 + (CAG)n Simple_repeat Simple_repeat 2 180 0 5 1384 686 150 0 11 chr13 104781216 104781320 -15502992 + polypurine Low_complexity Low_complexity 78 180 0 5 1384 744 144 0 0 chr13 104781304 104781477 -15502835 + (CAG)n Simple_repeat Simple_repeat 2 174 0 5 1384 883 224 66 29 chr13 104781538 104781855 -15502457 + L1MB2 LINE L1 5838 6168 -3 5 1384 230 274 35 12 chr13 104782246 104782331 -15501981 + GA-rich Low_complexity Low_complexity 4 90 0 5 1384 203 188 21 0 chr13 104782333 104782381 -15501931 + G-rich Low_complexity Low_complexity 5 53 0 6 1384 228 267 75 19 chr13 104783193 104783300 -15501012 - PB1 SINE Alu -14 113 1 6 1384 2215 180 152 48 chr13 104783331 104783846 -15500466 + Lx4B LINE L1 6486 7053 -5 6 1384 224 149 0 21 chr13 104783852 104783900 -15500412 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 6 1384 252 0 0 0 chr13 104784181 104784209 -15500103 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1384 630 291 44 25 chr13 104784398 104784602 -15499710 + L1M5 LINE L1 5491 5698 -426 6 1384 356 200 13 44 chr13 104784743 104784834 -15499478 + ID4_ SINE ID 2 89 -63 6 1384 263 198 52 86 chr13 104784834 104784859 -15499453 + B4 SINE B4 2 113 -179 6 1384 247 296 0 0 chr13 104784897 104784951 -15499361 - PB1 SINE Alu -63 64 11 6 1384 371 145 0 14 chr13 104784973 104785043 -15499269 + CT-rich Low_complexity Low_complexity 5 73 0 6 1384 218 39 0 0 chr13 104785043 104785069 -15499243 + (TTCC)n Simple_repeat Simple_repeat 2 27 0 6 1384 613 285 0 7 chr13 104785069 104785214 -15499098 - B1F SINE Alu -5 144 1 6 1384 197 33 33 0 chr13 104785224 104785254 -15499058 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 6 1384 1219 61 0 0 chr13 104785254 104785401 -15498911 - B1_Mus2 SINE Alu 0 147 1 6 1384 676 318 45 58 chr13 104785495 104785786 -15498526 - B4A SINE B4 -3 289 3 6 1384 358 308 227 4 chr13 104785845 104786096 -15498216 - MLT1A LTR MaLR -45 329 23 6 1384 39329 7 1 1 chr13 104786115 104791701 -15492611 + L1Md_A LINE L1 1 5586 -297 6 1384 9192 3 0 0 chr13 104791701 104792697 -15491615 + L1Md_A LINE L1 5587 6582 0 6 1384 39329 7 1 1 chr13 104792697 104792747 -15491565 + L1Md_A LINE L1 5587 5637 -246 6 1384 565 235 82 0 chr13 104792952 104793142 -15491170 + L1MB3 LINE L1 5238 5441 -739 6 1384 298 268 0 58 chr13 104793150 104793237 -15491075 + ID SINE ID 1 82 -142 6 1384 230 298 0 66 chr13 104793237 104793272 -15491040 + BC1_Mm scRNA scRNA 1 114 -38 6 1384 296 289 10 0 chr13 104793272 104793369 -15490943 + L1MB3 LINE L1 5500 5597 -586 6 1384 1331 159 55 26 chr13 104793402 104793673 -15490639 + ORR1C2 LTR MaLR 105 383 -1 6 1384 296 338 53 53 chr13 104793673 104793842 -15490470 - B4 SINE B4 -122 170 2 6 1384 723 87 0 0 chr13 104793852 104793956 -15490356 + (GGA)n Simple_repeat Simple_repeat 2 105 0 6 1384 824 260 79 51 chr13 104794055 104794408 -15489904 + L1MB3 LINE L1 5797 6159 -24 6 1384 851 259 10 10 chr13 104794409 104794616 -15489696 - B3 SINE B2 -3 213 7 6 1384 406 252 71 18 chr13 104794641 104794754 -15489558 - PB1D9 SINE Alu 0 120 2 6 1384 464 95 0 12 chr13 104796260 104796345 -15487967 + (GA)n Simple_repeat Simple_repeat 1 84 0 6 1384 430 293 14 35 chr13 104796382 104796527 -15487785 - RSINE1 SINE B4 -17 148 7 6 1384 522 46 0 0 chr13 104796951 104797016 -15487296 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1384 512 296 76 17 chr13 104797099 104797336 -15486976 - MLT2C1 LTR ERVL -138 259 9 6 1384 306 307 99 7 chr13 104797728 104797869 -15486443 - RMER15 LTR ERVL 0 575 422 6 1384 22 0 0 0 chr13 104798246 104798268 -15486044 + AT_rich Low_complexity Low_complexity 1 22 0 6 1384 520 143 0 0 chr13 104798791 104798875 -15485437 - PB1D9 SINE Alu 0 120 37 6 1384 1214 34 0 14 chr13 104798953 104799101 -15485211 + B1_Mm SINE Alu 2 147 0 6 1384 24 32 0 0 chr13 104799101 104799132 -15485180 + AT_rich Low_complexity Low_complexity 1 31 0 6 1384 682 179 8 0 chr13 104799260 104799383 -15484929 + B1F2 SINE Alu 26 149 0 6 1384 241 222 0 18 chr13 104799430 104799517 -15484795 + (TA)n Simple_repeat Simple_repeat 1 85 0 6 1384 770 152 46 15 chr13 104799533 104799712 -15484600 - B3 SINE B2 -10 185 2 6 1384 827 224 46 55 chr13 104799829 104800046 -15484266 - B3 SINE B2 0 216 2 6 1384 285 29 0 0 chr13 104800050 104800084 -15484228 + (T)n Simple_repeat Simple_repeat 1 34 0 6 1384 1225 48 0 0 chr13 104800084 104800231 -15484081 - B1_Mus2 SINE Alu 0 147 1 6 1384 224 197 49 0 chr13 104800254 104800315 -15483997 + (TCTA)n Simple_repeat Simple_repeat 3 66 0 6 1384 362 21 0 21 chr13 104800316 104800364 -15483948 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1384 399 294 23 35 chr13 104800378 104800519 -15483793 - RSINE1 SINE B4 -24 141 2 6 1384 21 0 0 0 chr13 104802224 104802245 -15482067 + AT_rich Low_complexity Low_complexity 1 21 0 6 1384 180 111 0 0 chr13 104802310 104802337 -15481975 + (TCC)n Simple_repeat Simple_repeat 2 28 0 6 1384 591 51 0 0 chr13 104802343 104802422 -15481890 + (TG)n Simple_repeat Simple_repeat 1 79 0 6 1384 457 282 12 69 chr13 104802433 104802593 -15481719 - RSINE1 SINE B4 -3 162 12 6 1384 414 0 0 0 chr13 104802625 104802671 -15481641 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1384 298 241 55 35 chr13 104804390 104804506 -15479806 - PB1D9 SINE Alu -3 117 1 6 1384 180 111 0 0 chr13 104804620 104804647 -15479665 + (TGG)n Simple_repeat Simple_repeat 1 27 0 6 1384 992 16 0 0 chr13 104804654 104804781 -15479531 - B1_Mus2 SINE Alu -20 127 1 6 1384 418 174 0 128 chr13 104804669 104804794 -15479518 - MT2B LTR ERVL -337 264 156 6 1384 569 174 108 75 chr13 104805181 104805367 -15478945 + B2_Mm2 SINE B2 1 192 -3 6 1384 504 316 19 0 chr13 104805517 104805675 -15478637 + RSINE1 SINE B4 1 161 -4 6 1384 224 158 9 0 chr13 104806003 104806047 -15478265 - ID2 SINE ID -36 47 1 6 1384 2399 57 3 0 chr13 104806538 104806856 -15477456 + ORR1A2 LTR MaLR 1 319 -8 6 1384 290 324 20 48 chr13 104806989 104807135 -15477177 + RMER4B LTR ERVK 22 163 -422 6 1384 268 320 20 0 chr13 104807879 104807979 -15476333 + L1MC LINE L1 5575 5676 -2206 6 1384 369 0 0 0 chr13 104808195 104808236 -15476076 + (CA)n Simple_repeat Simple_repeat 1 41 0 6 1384 2252 140 24 46 chr13 104809586 104809998 -15474314 + MTC LTR MaLR 17 419 -2 6 1384 1923 173 20 41 chr13 104810126 104810518 -15473794 - ORR1C2 LTR MaLR 0 384 1 6 1384 249 321 73 9 chr13 104811377 104811487 -15472825 - MTEa LTR MaLR -262 117 1 6 1384 386 259 200 56 chr13 104811642 104811892 -15472420 - B4A SINE B4 -2 290 5 6 1384 187 283 138 21 chr13 104812706 104812800 -15471512 - L3 LINE CR1 -1033 3456 3352 6 1384 192 152 0 0 chr13 104813276 104813309 -15471003 + T-rich Low_complexity Low_complexity 1 33 0 6 1384 382 311 8 0 chr13 104814055 104814174 -15470138 + PB1D7 SINE Alu 1 120 0 6 1384 22 0 0 0 chr13 104814174 104814196 -15470116 + AT_rich Low_complexity Low_complexity 1 22 0 6 1384 33 56 0 0 chr13 104814353 104814407 -15469905 + AT_rich Low_complexity Low_complexity 1 54 0 6 1384 576 0 0 0 chr13 104815309 104815373 -15468939 + (TTCC)n Simple_repeat Simple_repeat 4 67 0 6 1384 265 217 23 57 chr13 104816126 104816214 -15468098 - LTR37B LTR ERV1 -187 281 197 6 1384 390 297 5 142 chr13 104816246 104816450 -15467862 + RMER30 DNA MER1_type 10 185 -17 6 1384 612 272 59 32 chr13 104816628 104816814 -15467498 - ID_B1 SINE B4 -31 193 3 6 1384 374 189 139 0 chr13 104816969 104817063 -15467249 - B1_Mus1 SINE Alu -15 105 1 6 1384 251 237 17 17 chr13 104817822 104817882 -15466430 - ID SINE ID -159 65 6 6 1384 277 317 84 28 chr13 104817906 104818013 -15466299 - PB1D10 SINE Alu -3 114 2 6 1384 274 179 0 0 chr13 104818023 104818084 -15466228 + B1F1 SINE Alu 59 148 -1 6 1384 469 257 9 18 chr13 104819805 104819916 -15464396 + PB1D10 SINE Alu 5 114 -3 6 1384 230 136 23 0 chr13 104819996 104820040 -15464272 + GA-rich Low_complexity Low_complexity 2 46 0 6 1384 406 248 111 8 chr13 104820044 104820170 -15464142 + B1F1 SINE Alu 1 139 -10 6 1384 217 350 10 29 chr13 104820290 104820393 -15463919 + PB1D10 SINE Alu 1 101 -16 6 1384 1208 29 0 0 chr13 104820621 104820759 -15463553 + B1_Mus2 SINE Alu 1 138 -9 6 1384 188 34 0 33 chr13 104820759 104820789 -15463523 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1384 225 180 0 0 chr13 104821341 104821391 -15462921 + (TATG)n Simple_repeat Simple_repeat 2 51 0 6 1384 686 288 96 26 chr13 104821420 104821691 -15462621 - B4A SINE B4 0 292 3 6 1384 539 234 18 0 chr13 104823287 104823398 -15460914 + PB1D7 SINE Alu 2 114 -6 6 1384 960 186 120 0 chr13 104823798 104823981 -15460331 - B3 SINE B2 -11 205 1 6 1384 732 227 21 0 chr13 104824050 104824191 -15460121 - ID_B1 SINE B4 0 224 81 6 1384 369 0 0 0 chr13 104827918 104827959 -15456353 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1384 570 51 0 0 chr13 104827959 104828036 -15456276 + (GA)n Simple_repeat Simple_repeat 1 78 0 6 1384 583 279 71 127 chr13 104829083 104829317 -15454995 + B4A SINE B4 1 217 -75 6 1384 258 32 0 0 chr13 104829317 104829348 -15454964 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1384 583 279 71 127 chr13 104829348 104829421 -15454891 + B4A SINE B4 218 290 -2 6 1384 396 0 0 0 chr13 104829925 104829969 -15454343 + (CA)n Simple_repeat Simple_repeat 2 45 0 6 1384 741 256 50 5 chr13 104830767 104830967 -15453345 - B3 SINE B2 -6 210 2 6 1384 465 275 79 24 chr13 104832202 104832366 -15451946 + B3A SINE B2 1 173 -25 6 1384 325 66 16 47 chr13 104832526 104832543 -15451769 + (CAAAA)n Simple_repeat Simple_repeat 2 18 0 6 1384 1192 48 7 0 chr13 104832543 104832689 -15451623 + B1_Mus2 SINE Alu 1 147 0 6 1384 325 66 16 47 chr13 104832689 104832735 -15451577 + (CAAAA)n Simple_repeat Simple_repeat 4 47 0 6 1384 542 295 22 0 chr13 104833141 104833280 -15451032 - B1F1 SINE Alu -7 142 1 6 1384 21 0 0 0 chr13 104833376 104833397 -15450915 + AT_rich Low_complexity Low_complexity 1 21 0 6 1384 819 152 14 48 chr13 104833741 104833886 -15450426 + B1_Mur4 SINE Alu 1 140 -10 7 1384 930 182 0 0 chr13 104833958 104834106 -15450206 - B1_Mur2 SINE Alu -1 148 1 7 1384 794 180 67 34 chr13 104835142 104835320 -15448992 + B3 SINE B2 8 191 -25 7 1384 269 193 42 126 chr13 104835344 104835439 -15448873 + PB1D10 SINE Alu 31 117 0 7 1384 444 229 258 54 chr13 104835470 104835710 -15448602 + B4 SINE B4 2 290 -2 7 1384 551 239 28 21 chr13 104835805 104835946 -15448366 - ID_B1 SINE B4 -1 223 82 7 1384 188 67 33 0 chr13 104836754 104836784 -15447528 + (TGGGGG)n Simple_repeat Simple_repeat 4 34 0 7 1384 217 236 18 0 chr13 104837097 104837152 -15447160 + PB1 SINE Alu 70 125 -2 7 1384 237 282 56 0 chr13 104837437 104837508 -15446804 + L1MCc LINE L1 1214 1288 -5135 7 1384 538 234 92 49 chr13 104838043 104838220 -15446092 - B3A SINE B2 0 216 31 7 1384 630 198 134 0 chr13 104838206 104838363 -15445949 - B3 SINE B2 -37 179 2 7 1384 634 203 14 35 chr13 104838366 104838509 -15445803 + B1_Mur4 SINE Alu 9 148 -2 7 1384 534 91 0 0 chr13 104838994 104839071 -15445241 + (TG)n Simple_repeat Simple_repeat 2 78 0 7 1384 476 230 170 14 chr13 104839239 104839380 -15444932 - RSINE1 SINE B4 0 165 3 7 1384 279 355 27 41 chr13 104840077 104840224 -15444088 - MIR SINE MIR -29 233 89 7 1384 835 159 80 0 chr13 104840263 104840401 -15443911 - B1_Mur4 SINE Alu 0 150 2 7 1384 975 92 79 0 chr13 104841143 104841295 -15443017 - B2_Mm2 SINE B2 -5 190 27 7 1384 1737 80 17 0 chr13 104841297 104841536 -15442776 - L1_Mus1 LINE L1 0 6567 6325 7 1384 224 150 0 50 chr13 104841536 104841594 -15442718 + B1_Mus1 SINE Alu 21 71 -79 7 1384 469 325 57 13 chr13 104841640 104841868 -15442444 - B4A SINE B4 -36 256 19 7 1384 707 174 96 22 chr13 104841900 104842035 -15442277 - B1_Mur1 SINE Alu -2 147 3 7 1384 252 0 0 0 chr13 104842048 104842076 -15442236 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1384 22 0 0 0 chr13 104842152 104842174 -15442138 + AT_rich Low_complexity Low_complexity 1 22 0 7 1384 234 146 0 0 chr13 104843067 104843108 -15441204 - L1MB4 LINE L1 -7 6173 6133 7 1384 419 282 19 0 chr13 104843147 104843269 -15441043 + L1MB3 LINE L1 5485 5609 -571 7 1384 732 229 87 5 chr13 104843270 104843476 -15440836 + ID_B1 SINE B4 2 224 0 7 1384 652 252 35 97 chr13 104843530 104843729 -15440583 + L1MB3 LINE L1 5592 5783 -517 7 1384 4447 93 139 13 chr13 104843729 104844446 -15439866 + Lx2 LINE L1 6189 6996 -1 7 1384 652 247 35 102 chr13 104844446 104844553 -15439759 + L1MB3 LINE L1 5769 5869 -314 7 1384 348 241 25 51 chr13 104844598 104844716 -15439596 + L1MB3 LINE L1 5998 6112 -71 7 1384 340 264 304 70 chr13 104844717 104844991 -15439321 + MLT1A0 LTR MaLR 1 338 -27 7 1384 1228 48 0 0 chr13 104845021 104845168 -15439144 - B1_Mus2 SINE Alu 0 147 1 7 1384 707 132 7 0 chr13 104845276 104845427 -15438885 + (CA)n Simple_repeat Simple_repeat 2 153 0 7 1384 382 267 59 30 chr13 104845432 104845567 -15438745 - B1F1 SINE Alu -1 148 10 7 1384 369 0 0 0 chr13 104845568 104845609 -15438703 + (CAA)n Simple_repeat Simple_repeat 2 42 0 7 1384 836 228 24 15 chr13 104845670 104845875 -15438437 - B3 SINE B2 -6 210 4 7 1384 201 74 0 0 chr13 104845997 104846024 -15438288 + (TG)n Simple_repeat Simple_repeat 2 28 0 7 1384 345 251 134 112 chr13 104846062 104846331 -15437981 - B4 SINE B4 -16 276 2 7 1384 464 248 9 9 chr13 104846393 104846499 -15437813 - PB1D7 SINE Alu -14 106 1 7 1384 264 163 0 75 chr13 104846507 104846560 -15437752 - PB1D7 SINE Alu -7 113 65 7 1384 382 288 97 12 chr13 104846819 104846984 -15437328 + MLT1J-int LTR MaLR 162 340 -1047 7 1384 317 311 180 0 chr13 104847497 104847548 -15436764 - B1_Mur1 SINE Alu 0 149 87 7 1384 243 0 0 0 chr13 104847548 104847575 -15436737 + (TC)n Simple_repeat Simple_repeat 1 27 0 7 1384 258 32 0 0 chr13 104847575 104847605 -15436707 + (CA)n Simple_repeat Simple_repeat 1 31 0 7 1384 317 311 180 0 chr13 104847605 104847674 -15436638 - B1_Mur1 SINE Alu -63 86 8 7 1384 477 0 0 0 chr13 104847692 104847745 -15436567 + (TTCC)n Simple_repeat Simple_repeat 3 55 0 7 1384 412 177 25 0 chr13 104849373 104849452 -15434860 - B3 SINE B2 -132 84 4 7 1384 29 0 0 0 chr13 104850235 104850264 -15434048 + AT_rich Low_complexity Low_complexity 1 29 0 7 1384 550 179 35 207 chr13 104851054 104851223 -15433089 + B1F2 SINE Alu 2 141 -8 7 1384 276 30 0 0 chr13 104851226 104851259 -15433053 + (TG)n Simple_repeat Simple_repeat 1 33 0 7 1384 785 252 19 38 chr13 104851319 104851529 -15432783 + B3 SINE B2 1 206 -10 7 1384 1153 105 172 5 chr13 104854102 104854294 -15430018 - URR1A DNA MER1_type 0 226 3 7 1384 422 191 78 52 chr13 104854702 104854818 -15429494 - PB1D9 SINE Alu 0 120 2 7 1384 666 213 28 0 chr13 104854915 104855056 -15429256 - B1_Mur1 SINE Alu 0 149 5 7 1384 573 111 11 0 chr13 104855663 104855753 -15428559 + URR1B DNA MER1_type 135 225 0 7 1384 382 303 68 43 chr13 104856048 104856116 -15428196 + MLT1A LTR MaLR 19 85 -289 7 1384 279 0 0 0 chr13 104856116 104856147 -15428165 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1384 382 303 68 43 chr13 104856147 104856285 -15428027 + MLT1A LTR MaLR 86 230 -144 7 1384 582 86 0 0 chr13 104856347 104856428 -15427884 + (GA)n Simple_repeat Simple_repeat 2 82 0 7 1385 443 244 90 79 chr13 104859025 104859203 -15425109 - B3A SINE B2 -18 180 1 7 1385 404 307 0 0 chr13 104860316 104860417 -15423895 - PB1D10 SINE Alu 0 117 17 7 1385 31 26 0 0 chr13 104861661 104861699 -15422613 + AT_rich Low_complexity Low_complexity 1 38 0 7 1385 283 265 174 21 chr13 104861914 104862055 -15422257 + MLT2B4 LTR ERVL 84 245 -169 7 1385 403 247 20 10 chr13 104862233 104862331 -15421981 - B1F SINE Alu -29 120 22 7 1385 22 0 0 0 chr13 104863498 104863520 -15420792 + AT_rich Low_complexity Low_complexity 1 22 0 7 1385 197 345 67 67 chr13 104863736 104863960 -15420352 - MIR SINE MIR -31 231 8 7 1385 240 299 26 0 chr13 104864437 104864514 -15419798 - ID4 SINE ID -1 82 4 7 1385 22 70 0 0 chr13 104865339 104865382 -15418930 + AT_rich Low_complexity Low_complexity 1 43 0 7 1385 563 214 175 21 chr13 104866093 104866224 -15418088 + B3A SINE B2 1 153 -45 7 1385 462 18 0 0 chr13 104866224 104866279 -15418033 + (TA)n Simple_repeat Simple_repeat 1 55 0 7 1385 563 214 175 21 chr13 104866279 104866290 -15418022 + B3A SINE B2 154 164 -34 7 1385 361 357 50 25 chr13 104867171 104867412 -15416900 + MLT1L LTR MaLR 362 608 -2 7 1385 255 125 0 0 chr13 104867443 104867483 -15416829 + (GGA)n Simple_repeat Simple_repeat 1 40 0 7 1385 457 269 73 103 chr13 104868131 104868449 -15415863 - B4 SINE B4 -20 272 4 7 1385 3280 43 15 2 chr13 104868451 104868846 -15415466 + MTB LTR MaLR 1 400 0 7 1385 301 225 76 33 chr13 104870283 104870375 -15413937 - PB1D10 SINE Alu -1 116 21 7 1385 311 248 137 0 chr13 104870511 104870628 -15413684 - MER3 DNA MER1_type -4 205 73 7 1385 408 165 0 0 chr13 104871208 104871299 -15413013 + (CAGA)n Simple_repeat Simple_repeat 4 94 0 7 1385 663 210 28 7 chr13 104871320 104871464 -15412848 - B3A SINE B2 -48 150 4 7 1385 401 304 24 7 chr13 104871477 104871602 -15412710 - B1_Mur1 SINE Alu 0 120 2 7 1385 548 281 22 0 chr13 104871602 104871735 -15412577 - RSINE1 SINE B4 -28 137 2 7 1385 500 215 30 122 chr13 104871895 104872059 -15412253 - B1F SINE Alu 0 149 1 7 1385 857 254 89 22 chr13 104872227 104872518 -15411794 + MTE2b LTR MaLR 70 379 0 7 1385 291 229 11 88 chr13 104873069 104873160 -15411152 - B3A SINE B2 -114 84 1 7 1385 252 360 29 20 chr13 104873521 104873623 -15410689 + MER115 DNA Tip100 122 224 -469 7 1385 280 295 22 11 chr13 104874655 104874744 -15409568 - B1_Mm SINE Alu -52 95 6 7 1385 211 297 31 0 chr13 104874691 104874755 -15409557 - B4 SINE B4 -148 144 79 7 1385 531 31 0 0 chr13 104874791 104874856 -15409456 + (CA)n Simple_repeat Simple_repeat 1 65 0 7 1385 444 228 134 86 chr13 104875825 104876012 -15408300 + B3A SINE B2 1 196 -2 7 1385 233 234 62 0 chr13 104876671 104876735 -15407577 - ID4_ SINE ID -4 79 12 7 1385 1538 87 50 0 chr13 104876957 104877176 -15407136 + L1Md_F2 LINE L1 6353 6582 0 7 1385 351 253 146 7 chr13 104877229 104877380 -15406932 - MIRb SINE MIR -20 248 77 7 1385 2002 139 26 34 chr13 104877951 104878282 -15406030 + Lx LINE L1 6306 6639 -15 7 1385 944 76 219 12 chr13 104878282 104878442 -15405870 + B2_Mm2 SINE B2 2 194 -1 7 1385 2002 139 26 34 chr13 104878442 104878460 -15405852 + Lx LINE L1 6640 6652 -2 7 1385 547 300 50 11 chr13 104878467 104878649 -15405663 + B3A SINE B2 1 189 -9 7 1385 23 33 0 0 chr13 104878654 104878684 -15405628 + AT_rich Low_complexity Low_complexity 1 30 0 7 1385 1394 74 17 0 chr13 104878722 104878898 -15405414 + B2_Mm2 SINE B2 3 181 -14 7 1385 495 0 0 0 chr13 104878902 104878957 -15405355 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 7 1385 670 316 82 8 chr13 104880108 104880376 -15403936 + B4A SINE B4 1 288 -4 7 1385 233 281 142 29 chr13 104881523 104881728 -15402584 + L1MC5 LINE L1 7657 7884 -77 7 1385 190 345 66 40 chr13 104883128 104883279 -15401033 - MIRm SINE MIR -119 157 3 7 1385 423 172 242 33 chr13 104883843 104883963 -15400349 + B1F SINE Alu 5 149 0 7 1385 721 195 254 0 chr13 104884336 104884505 -15399807 - B3 SINE B2 -3 213 2 7 1385 255 217 0 0 chr13 104884522 104884582 -15399730 + (TG)n Simple_repeat Simple_repeat 2 61 0 7 1385 219 179 88 18 chr13 104884663 104884720 -15399592 - B4A SINE B4 -205 87 27 7 1385 1109 220 128 19 chr13 104884850 104885170 -15399142 - ORR1E LTR MaLR -1 358 4 7 1385 285 138 121 0 chr13 104885814 104885872 -15398440 - tRNA-Ala-GCY_ tRNA tRNA -1 74 10 8 1385 852 174 197 0 chr13 104886461 104886639 -15397673 + B3 SINE B2 3 215 -1 8 1385 920 229 16 5 chr13 104886812 104887001 -15397311 - B3A SINE B2 -4 194 4 8 1385 366 306 0 35 chr13 104887122 104887237 -15397075 - PB1D10 SINE Alu -6 111 1 8 1385 185 328 29 29 chr13 104888489 104888558 -15395754 - MIRm SINE MIR 0 276 208 8 1385 567 199 179 0 chr13 104888884 104889055 -15395257 + MT2A LTR ERVL 347 552 -49 8 1385 501 84 0 0 chr13 104889275 104889346 -15394966 + (CA)n Simple_repeat Simple_repeat 2 72 0 8 1385 395 144 108 32 chr13 104889638 104889731 -15394581 - PB1D9 SINE Alu 0 120 21 8 1385 535 253 34 7 chr13 104889749 104889896 -15394416 - B3A SINE B2 -47 151 1 8 1385 511 121 0 8 chr13 104890217 104890309 -15394003 + B1_Mur4 SINE Alu 31 148 -2 8 1385 836 203 90 5 chr13 104890531 104890719 -15393593 + B3 SINE B2 2 205 -11 8 1385 608 240 5 141 chr13 104891157 104891356 -15392956 + B3A SINE B2 2 174 -24 8 1385 1831 134 119 51 chr13 104891716 104892070 -15392242 + ORR1C1 LTR MaLR 1 378 0 8 1385 489 239 8 8 chr13 104892116 104892234 -15392078 + MLT1H LTR MaLR 66 183 -366 8 1385 379 334 129 38 chr13 104892564 104892959 -15391353 + L2a LINE L2 2935 3365 -61 8 1385 193 279 15 0 chr13 104893034 104893102 -15391210 - MIR SINE MIR -166 96 28 8 1385 378 240 0 0 chr13 104893935 104894010 -15390302 - B4A SINE B4 -86 206 132 8 1385 4283 139 155 87 chr13 104894037 104895000 -15389312 + RLTR25A LTR ERVK 1 1028 0 8 1385 251 213 66 0 chr13 104895005 104895066 -15389246 - B4 SINE B4 -225 67 3 8 1385 280 256 20 171 chr13 104895208 104895354 -15388958 + ID_B1 SINE B4 88 211 -13 8 1385 315 0 0 0 chr13 104895380 104895415 -15388897 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 1385 1355 147 221 43 chr13 104895816 104896142 -15388170 - ORR1C2 LTR MaLR 0 384 1 8 1385 22 0 0 0 chr13 104896222 104896244 -15388068 + GC_rich Low_complexity Low_complexity 1 22 0 8 1385 403 306 9 0 chr13 104896244 104896355 -15387957 - PB1D10 SINE Alu -4 113 2 8 1385 283 312 147 8 chr13 104896504 104896762 -15387550 + Charlie1a DNA MER1_type 37 326 -1129 8 1385 332 345 18 0 chr13 104896932 104897042 -15387270 - PB1D10 SINE Alu -5 112 1 8 1385 555 162 26 43 chr13 104897159 104897275 -15387037 + PB1D7 SINE Alu 7 120 0 8 1385 914 296 200 25 chr13 104897324 104897741 -15386571 + Charlie1a DNA MER1_type 562 1045 -410 8 1385 1474 60 16 0 chr13 104897741 104897924 -15386388 + B2_Mm2 SINE B2 2 187 -8 8 1385 914 296 200 25 chr13 104897924 104898133 -15386179 + Charlie1a DNA MER1_type 1046 1321 -134 8 1385 1636 21 0 16 chr13 104898133 104898324 -15385988 - B2_Mm1a SINE B2 -4 189 2 8 1385 914 296 200 25 chr13 104898324 104898452 -15385860 + Charlie1a DNA MER1_type 1322 1449 -6 8 1385 224 130 0 107 chr13 104899719 104899831 -15384481 + (CCCCG)n Simple_repeat Simple_repeat 5 104 0 8 1385 566 297 16 11 chr13 104902931 104903115 -15381197 + MER20 DNA MER1_type 34 218 -1 8 1385 796 330 152 29 chr13 104903117 104903527 -15380785 + L2a LINE L2 908 1398 -2021 8 1385 252 0 0 0 chr13 104903527 104903555 -15380757 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 8 1385 796 330 152 29 chr13 104903555 104903911 -15380401 + L2a LINE L2 1399 1768 -1651 8 1385 198 0 0 0 chr13 104903911 104903933 -15380379 + (A)n Simple_repeat Simple_repeat 1 22 0 8 1385 442 243 153 40 chr13 104903951 104904127 -15380185 + B3A SINE B2 2 197 -1 8 1385 804 174 168 6 chr13 104904137 104904316 -15379996 + B3 SINE B2 1 208 -8 8 1385 201 319 144 16 chr13 104904349 104904543 -15379769 + L2a LINE L2 1839 2057 -1362 8 1385 917 106 7 0 chr13 104904546 104904688 -15379624 - B1_Mus1 SINE Alu 0 148 6 8 1385 764 321 92 13 chr13 104904717 104904832 -15379480 + L2a LINE L2 2123 2254 -1165 8 1385 300 53 0 0 chr13 104904832 104904870 -15379442 + (TCTG)n Simple_repeat Simple_repeat 4 41 0 8 1385 764 321 92 13 chr13 104904870 104905230 -15379082 + L2a LINE L2 2255 2636 -783 8 1385 525 268 31 0 chr13 104905252 104905379 -15378933 - B1_Mur2 SINE Alu -16 133 3 8 1385 238 263 0 17 chr13 104905416 104905474 -15378838 + ID4 SINE ID 1 57 -26 8 1385 258 32 0 0 chr13 104905482 104905513 -15378799 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8 1385 240 336 65 16 chr13 104905518 104905642 -15378670 + L2a LINE L2 2635 2764 -655 8 1385 275 289 34 94 chr13 104905807 104906040 -15378272 + L2a LINE L2 3017 3235 -152 8 1385 206 322 57 41 chr13 104906458 104906581 -15377731 - L2c LINE L2 -11 3376 3252 8 1385 981 61 0 0 chr13 104906957 104906968 -15377344 - B1_Mus1 SINE Alu -3 145 135 8 1385 302 0 0 26 chr13 104906968 104907007 -15377305 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 8 1385 981 61 0 0 chr13 104907007 104907127 -15377185 - B1_Mus1 SINE Alu -14 134 15 8 1385 401 273 0 90 chr13 104907027 104907160 -15377152 - MT2B LTR ERVL -337 264 144 8 1385 303 259 8 92 chr13 104907652 104907771 -15376541 + L2a LINE L2 3314 3422 -4 8 1385 1218 54 0 0 chr13 104907789 104907937 -15376375 - B1_Mus1 SINE Alu 0 148 1 8 1385 288 259 0 0 chr13 104908772 104908855 -15375457 + B2_Mm2 SINE B2 4 86 -112 8 1385 363 78 0 0 chr13 104910289 104910340 -15373972 + (TG)n Simple_repeat Simple_repeat 1 51 0 8 1385 230 322 33 44 chr13 104910558 104910649 -15373663 + B1F SINE Alu 46 135 -14 8 1385 4413 43 32 0 chr13 104910909 104911441 -15372871 + L1Md_F2 LINE L1 6034 6582 0 8 1385 320 43 22 0 chr13 104913017 104913063 -15371249 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1385 495 118 0 0 chr13 104913143 104913219 -15371093 + (CAA)n Simple_repeat Simple_repeat 3 78 0 8 1385 183 156 0 0 chr13 104913363 104913395 -15370917 + CT-rich Low_complexity Low_complexity 2 33 0 8 1385 1323 74 20 45 chr13 104913431 104913630 -15370682 - B2_Mm2 SINE B2 -1 194 1 8 1385 532 202 50 0 chr13 104914556 104914675 -15369637 - Lx4A LINE L1 -1 7057 6933 8 1385 330 175 0 0 chr13 104914723 104914803 -15369509 + (TG)n Simple_repeat Simple_repeat 1 80 0 8 1385 1042 46 30 0 chr13 104915514 104915645 -15368667 + B1_Mus2 SINE Alu 2 136 -11 8 1385 333 0 0 0 chr13 104915645 104915682 -15368630 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 8 1385 987 228 83 36 chr13 104915692 104915970 -15368342 + B4 SINE B4 1 291 -1 8 1385 406 218 11 11 chr13 104916344 104916432 -15367880 + B1_Mur2 SINE Alu 61 148 -1 8 1385 1475 67 52 0 chr13 104916519 104916713 -15367599 + L1_Mus1 LINE L1 6364 6567 0 8 1385 231 36 0 0 chr13 104916782 104916810 -15367502 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 8 1385 251 234 49 61 chr13 104916818 104916900 -15367412 - B1_Mur3 SINE Alu -67 82 2 8 1385 1912 226 40 20 chr13 104917303 104917775 -15366537 - MT2A LTR ERVL -41 543 1 8 1385 252 309 140 96 chr13 104917872 104918144 -15366168 + B4A SINE B4 5 288 -4 8 1385 339 25 0 0 chr13 104918148 104918188 -15366124 + (CA)n Simple_repeat Simple_repeat 1 40 0 8 1385 306 0 0 0 chr13 104918288 104918322 -15365990 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 8 1385 351 287 30 0 chr13 104919677 104919778 -15364534 - MER82 DNA MER2_type -549 104 1 8 1385 184 352 44 0 chr13 104919811 104919902 -15364410 + L2a LINE L2 2371 2465 -954 8 1385 247 375 0 8 chr13 104920044 104920165 -15364147 + L2a LINE L2 2702 2821 -598 8 1385 913 237 10 0 chr13 104920174 104920372 -15363940 + ID_B1 SINE B4 14 213 -11 8 1385 224 393 16 0 chr13 104920712 104920834 -15363478 + L2a LINE L2 3280 3403 -23 8 1385 443 304 35 28 chr13 104921236 104921378 -15362934 + RSINE1 SINE B4 2 144 -21 8 1385 243 0 0 0 chr13 104921391 104921418 -15362894 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 8 1385 344 246 0 0 chr13 104921535 104921604 -15362708 - RMER30 DNA MER1_type -1 201 133 8 1385 335 323 0 10 chr13 104922389 104922486 -15361826 - PB1 SINE Alu -11 116 21 8 1385 21 0 0 0 chr13 104922495 104922516 -15361796 + AT_rich Low_complexity Low_complexity 1 21 0 8 1385 484 288 90 8 chr13 104922753 104922886 -15361426 + RSINE1 SINE B4 3 146 -19 8 1385 216 0 0 0 chr13 104922929 104922953 -15361359 + (TC)n Simple_repeat Simple_repeat 1 24 0 8 1385 771 216 87 87 chr13 104923090 104923308 -15361004 - ID_B1 SINE B4 -6 218 1 8 1385 443 229 58 17 chr13 104923462 104923582 -15360730 + PB1 SINE Alu 2 126 -1 8 1385 240 111 0 0 chr13 104924025 104924061 -15360251 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 8 1385 317 250 59 10 chr13 104925026 104925126 -15359186 - MTD LTR MaLR -15 404 300 8 1385 296 26 0 0 chr13 104925126 104925165 -15359147 + B2_Mm2 SINE B2 1 39 -156 8 1385 468 214 0 28 chr13 104925264 104925370 -15358942 + B1_Mur1 SINE Alu 11 113 -36 8 1385 336 235 135 19 chr13 104926002 104926106 -15358206 - PB1D9 SINE Alu -4 116 1 8 1385 642 288 28 92 chr13 104926909 104927127 -15357185 - ID_B1 SINE B4 -7 217 14 8 1385 1199 28 14 0 chr13 104927180 104927325 -15356987 + B1_Mm SINE Alu 1 147 0 8 1385 222 128 0 0 chr13 104927325 104927364 -15356948 + (A)n Simple_repeat Simple_repeat 1 39 0 8 1385 367 335 147 6 chr13 104927376 104927553 -15356759 + B4A SINE B4 68 269 -23 8 1385 1020 154 4 4 chr13 104927568 104927808 -15356504 + (CA)n Simple_repeat Simple_repeat 1 240 0 8 1385 492 92 53 0 chr13 104927888 104927964 -15356348 + B1_Mus2 SINE Alu 68 147 0 8 1385 596 235 36 85 chr13 104928223 104928446 -15355866 + B4 SINE B4 2 213 -79 8 1385 7133 54 23 3 chr13 104928486 104929365 -15354947 - L1_Mus1 LINE L1 0 6567 5672 8 1385 1195 106 6 0 chr13 104929365 104929545 -15354767 + L1_Mm LINE L1 5230 5410 -473 8 1385 718 241 77 19 chr13 104931160 104931367 -15352945 + ID_B1 SINE B4 5 223 -1 8 1385 1303 108 0 21 chr13 104932594 104932784 -15351528 - B2_Mm2 SINE B2 -8 187 2 8 1385 1396 87 16 0 chr13 104932965 104933150 -15351162 - B2_Mm2 SINE B2 -7 188 1 8 1385 1176 35 14 0 chr13 104933218 104933363 -15350949 + B1_Mus2 SINE Alu 1 147 0 8 1385 183 80 0 0 chr13 104933363 104933388 -15350924 + (A)n Simple_repeat Simple_repeat 1 25 0 8 1385 423 0 0 0 chr13 104934327 104934374 -15349938 + (GA)n Simple_repeat Simple_repeat 2 48 0 8 1385 376 240 79 10 chr13 104934747 104934848 -15349464 + ID_B1 SINE B4 116 223 -1 8 1385 1143 41 0 64 chr13 104935408 104935565 -15348747 + B1_Mus2 SINE Alu 1 147 0 8 1385 373 296 0 101 chr13 104935666 104935824 -15348488 - RSINE1 SINE B4 -1 164 23 9 1385 621 238 92 19 chr13 104936433 104936639 -15347673 + ID_B1 SINE B4 1 221 -3 9 1385 556 219 36 7 chr13 104936931 104937069 -15347243 + B1_Mur1 SINE Alu 1 142 -7 9 1385 230 146 49 0 chr13 104937075 104937116 -15347196 + PB1D10 SINE Alu 69 111 -6 9 1385 213 171 49 0 chr13 104938525 104938566 -15345746 + PB1 SINE Alu 78 120 -7 9 1385 310 203 23 78 chr13 104939227 104939355 -15344957 + B1_Mur4 SINE Alu 1 121 -29 9 1385 271 305 83 21 chr13 104939514 104939658 -15344654 + L1MC2 LINE L1 6063 6215 -129 9 1385 1219 21 0 33 chr13 104939842 104939992 -15344320 - B1_Mus2 SINE Alu 0 147 3 9 1385 386 221 90 56 chr13 104941269 104941286 -15343026 - B1_Mur2 SINE Alu 0 149 139 9 1385 516 105 0 0 chr13 104941286 104941362 -15342950 + (TTCTG)n Simple_repeat Simple_repeat 4 79 0 9 1385 386 221 90 56 chr13 104941362 104941488 -15342824 - B1_Mur2 SINE Alu -11 138 1 9 1385 22 0 0 0 chr13 104942214 104942236 -15342076 + AT_rich Low_complexity Low_complexity 1 22 0 9 1385 26 0 0 0 chr13 104942838 104942864 -15341448 + AT_rich Low_complexity Low_complexity 1 26 0 9 1385 503 197 8 86 chr13 104945534 104945662 -15338650 + PB1D9 SINE Alu 3 120 0 9 1385 212 386 50 0 chr13 104946412 104946552 -15337760 + B1F1 SINE Alu 3 149 0 9 1385 270 0 0 0 chr13 104946603 104946633 -15337679 + (CA)n Simple_repeat Simple_repeat 1 30 0 9 1385 464 137 82 31 chr13 104947178 104947276 -15337036 - RLTR13C2 LTR ERVK 0 808 706 9 1385 258 229 18 24 chr13 104947254 104947342 -15336970 + RLTR13D6 LTR ERVK 680 814 -88 9 1385 866 140 19 13 chr13 104947342 104947501 -15336811 + ETnERV2-int LTR ERVK 27 186 -5622 9 1385 3656 244 50 29 chr13 104948051 104949408 -15334904 + ETnERV2-int LTR ERVK 175 1685 -5568 9 1385 2714 75 93 49 chr13 104949394 104949843 -15334469 + ETnERV2-int LTR ERVK 1980 2448 -4796 9 1385 298 93 130 0 chr13 104949844 104949898 -15334414 + RLTR13C2 LTR ERVK 748 808 0 9 1385 3918 112 44 16 chr13 104950240 104950854 -15333458 + Lx4A LINE L1 6425 7055 -3 9 1385 230 73 0 24 chr13 104950857 104950899 -15333413 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 9 1385 34 24 0 0 chr13 104950926 104950967 -15333345 + AT_rich Low_complexity Low_complexity 1 41 0 9 1385 657 190 0 32 chr13 104951500 104951685 -15332627 + (CA)n Simple_repeat Simple_repeat 2 180 0 9 1385 185 247 0 12 chr13 104951962 104952044 -15332268 + (TATG)n Simple_repeat Simple_repeat 1 81 0 9 1385 583 315 0 0 chr13 104952148 104952291 -15332021 - ID_B1 SINE B4 0 224 82 9 1385 509 198 19 19 chr13 104952345 104952448 -15331864 - MTB_Mm LTR MaLR -304 103 1 9 1385 7253 130 24 13 chr13 104952450 104953578 -15330734 - MERVL_2A-int LTR ERVL -1431 4330 3191 9 1385 1656 175 319 9 chr13 104953578 104954038 -15330274 - RMER20B LTR ERVK -24 603 1 9 1385 613 114 0 0 chr13 104954038 104954126 -15330186 - MERVL_2A-int LTR ERVL -2566 3195 3108 9 1385 313 340 115 5 chr13 104954282 104954474 -15329838 - MIR SINE MIR 0 262 50 9 1385 346 302 0 65 chr13 104954651 104954789 -15329523 - L2a LINE L2 -18 3408 3280 9 1385 603 308 48 5 chr13 104954796 104955005 -15329307 - MER58B DNA MER1_type -12 329 112 9 1385 378 61 0 0 chr13 104955619 104955668 -15328644 + (CA)n Simple_repeat Simple_repeat 1 49 0 9 1385 447 250 24 7 chr13 104955707 104955838 -15328474 - L1MA4A LINE L1 -428 5875 5726 9 1385 204 122 0 0 chr13 104956070 104956111 -15328201 + (T)n Simple_repeat Simple_repeat 1 41 0 9 1385 1341 83 39 6 chr13 104956514 104956696 -15327616 + B2_Mm2 SINE B2 2 189 -6 9 1385 970 234 10 0 chr13 104957528 104957729 -15326583 - B3 SINE B2 -13 203 1 9 1385 1200 41 0 0 chr13 104957949 104958095 -15326217 + B1_Mus2 SINE Alu 2 147 0 9 1385 225 0 0 0 chr13 104958095 104958120 -15326192 + (A)n Simple_repeat Simple_repeat 1 25 0 9 1385 533 320 19 0 chr13 104959126 104959282 -15325030 + ID_B1 SINE B4 65 223 -1 9 1385 227 338 13 13 chr13 104959375 104959453 -15324859 + B4 SINE B4 69 146 -146 9 1385 388 268 40 35 chr13 104959403 104959546 -15324766 + PB1D10 SINE Alu 8 149 0 9 1385 5741 50 0 0 chr13 104960226 104960928 -15323384 + L1Md_F2 LINE L1 5869 6570 -12 9 1385 180 0 0 0 chr13 104961148 104961168 -15323144 + (T)n Simple_repeat Simple_repeat 1 20 0 9 1385 490 218 262 25 chr13 104961181 104961341 -15322971 - B3 SINE B2 -18 198 1 9 1385 1310 72 27 16 chr13 104961370 104961554 -15322758 - B2_Mm2 SINE B2 -9 186 1 9 1385 21 57 0 0 chr13 104961577 104961612 -15322700 + AT_rich Low_complexity Low_complexity 1 35 0 9 1385 216 215 93 131 chr13 104961696 104961803 -15322509 - PB1D10 SINE Alu 0 117 15 9 1385 435 309 36 7 chr13 104961906 104962043 -15322269 - B1F SINE Alu -8 141 1 9 1385 445 186 78 0 chr13 104962057 104962159 -15322153 - PB1D9 SINE Alu -10 110 1 9 1385 241 314 57 8 chr13 104962068 104962079 -15322233 - ID_B1 SINE B4 -48 176 132 9 1385 299 193 43 117 chr13 104962079 104962173 -15322139 - MT2B LTR ERVL -360 241 155 9 1385 241 314 57 8 chr13 104962173 104962190 -15322122 - ID_B1 SINE B4 -48 131 49 9 1385 358 257 243 70 chr13 104962350 104962593 -15321719 + B4 SINE B4 2 286 -6 9 1385 487 274 77 64 chr13 104963063 104963219 -15321093 + RSINE1 SINE B4 8 165 0 9 1385 268 335 146 62 chr13 104963219 104963240 -15321072 + B3A SINE B2 3 194 -4 9 1385 955 132 0 0 chr13 104963377 104963521 -15320791 - B1_Mur4 SINE Alu 0 150 7 9 1385 308 209 0 141 chr13 104963412 104963540 -15320772 - MT2B LTR ERVL -337 264 155 9 1385 182 316 51 38 chr13 104964566 104964645 -15319667 + L2a LINE L2 3030 3109 -317 9 1385 1182 35 14 0 chr13 104965191 104965336 -15318976 - B1_Mm SINE Alu 0 147 1 9 1385 696 246 76 35 chr13 104965615 104965748 -15318564 + B3 SINE B2 1 148 -68 9 1385 321 26 0 0 chr13 104965748 104965786 -15318526 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1385 696 246 76 35 chr13 104965786 104965850 -15318462 + B3 SINE B2 149 206 -10 9 1385 912 41 0 16 chr13 104965879 104966002 -15318310 + B1_Mus2 SINE Alu 27 147 0 9 1385 378 0 0 0 chr13 104966210 104966252 -15318060 + (CA)n Simple_repeat Simple_repeat 2 43 0 9 1385 824 289 14 4 chr13 104966694 104966913 -15317399 + ID_B1 SINE B4 1 226 -66 9 1385 282 186 0 157 chr13 104970866 104970936 -15313376 + RSINE1 SINE B4 107 165 0 9 1385 194 174 0 21 chr13 104971667 104971714 -15312598 + CT-rich Low_complexity Low_complexity 3 48 0 9 1385 699 165 47 0 chr13 104971719 104971846 -15312466 - B1_Mur3 SINE Alu -12 137 5 9 1385 224 293 17 33 chr13 104971929 104971989 -15312323 - RSINE1 SINE B4 -104 61 3 9 1385 222 192 214 124 chr13 104972135 104972224 -15312088 + RSINE1 SINE B4 69 165 0 9 1385 200 34 0 33 chr13 104972684 104972714 -15311598 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9 1385 1074 80 0 0 chr13 104972714 104972851 -15311461 - B1_Mus1 SINE Alu -10 138 2 9 1385 1417 227 29 36 chr13 104973037 104973458 -15310854 + RMER3D-int LTR ERVK 2420 2837 -5 9 1385 3283 59 0 5 chr13 104973464 104973887 -15310425 + BGLII LTR ERVK 1 421 0 9 1385 318 258 22 22 chr13 104974493 104974584 -15309728 + Charlie9 DNA MER1_type 2667 2757 0 9 1385 1289 93 11 21 chr13 104975547 104975734 -15308578 + B2_Mm1t SINE B2 2 186 -7 9 1385 261 312 12 0 chr13 104976252 104976332 -15307980 + ID4 SINE ID 3 83 0 9 1385 250 290 48 0 chr13 104976757 104976819 -15307493 + ID4_ SINE ID 11 75 -8 9 1385 221 339 112 62 chr13 104978608 104978966 -15305346 - L2 LINE L2 -467 2952 2577 9 1385 409 270 235 18 chr13 104978981 104979118 -15305194 - L2 LINE L2 -706 2713 2550 9 1385 474 18 0 0 chr13 104979118 104979173 -15305139 + (TC)n Simple_repeat Simple_repeat 2 56 0 9 1385 409 270 235 18 chr13 104979173 104979367 -15304945 - L2 LINE L2 -870 2549 2310 9 1385 1463 68 0 10 chr13 104979425 104979619 -15304693 + B2_Mm2 SINE B2 1 192 -3 9 1385 425 242 139 41 chr13 104980613 104980785 -15303527 - MTD LTR MaLR -1 418 230 9 1385 185 132 26 0 chr13 104980790 104980828 -15303484 + (TAGA)n Simple_repeat Simple_repeat 1 39 0 9 1385 1126 211 189 3 chr13 104981314 104981667 -15302645 + MTD LTR MaLR 1 419 0 9 1385 319 324 39 34 chr13 104981682 104981861 -15302451 - RLTR42-int LTR ERVK -4187 1335 1156 9 1385 476 257 67 0 chr13 104981874 104981979 -15302333 - B4 SINE B4 -162 130 19 9 1385 219 69 0 0 chr13 104982438 104982467 -15301845 + (T)n Simple_repeat Simple_repeat 1 29 0 9 1385 664 46 370 0 chr13 104982467 104982575 -15301737 - B1_Mus1 SINE Alu 0 148 1 9 1385 280 266 0 0 chr13 104982707 104982771 -15301541 - B4A SINE B4 -146 146 83 9 1385 1114 74 0 20 chr13 104982889 104983040 -15301272 + B1_Mus1 SINE Alu 1 148 0 9 1385 498 268 171 41 chr13 104983481 104983726 -15300586 - B4A SINE B4 -13 279 3 9 1385 678 272 133 19 chr13 104983731 104984046 -15300266 - L1MB2 LINE L1 -44 6127 5777 9 1385 415 308 190 0 chr13 104985165 104985402 -15298910 - B4A SINE B4 -10 282 1 9 1385 7024 109 23 11 chr13 104985429 104986768 -15297544 - Lx LINE L1 -13 6641 5291 9 1385 1254 65 12 0 chr13 104986780 104986949 -15297363 - B2_Mm1t SINE B2 -22 171 1 9 1385 1617 114 38 4 chr13 104986949 104987212 -15297100 - L1_Mur2 LINE L1 -580 5297 5026 9 1385 1202 41 0 13 chr13 104987330 104987479 -15296833 + B1_Mus1 SINE Alu 2 148 0 9 1385 37 0 0 0 chr13 104987529 104987566 -15296746 + AT_rich Low_complexity Low_complexity 1 37 0 9 1385 1476 73 5 0 chr13 104987566 104987758 -15296554 - B2_Mm1t SINE B2 0 193 1 9 1385 242 279 0 16 chr13 104987938 104988000 -15296312 + B1F SINE Alu 62 122 -27 9 1386 249 33 0 0 chr13 104988981 104989011 -15295301 + (TTA)n Simple_repeat Simple_repeat 2 31 0 9 1386 1084 58 0 0 chr13 104989011 104989150 -15295162 - B1_Mus1 SINE Alu -1 147 9 1 1386 279 243 33 111 chr13 104989013 104989166 -15295146 + YREP_Mm Unknown Unknown 180 320 -1492 1 1386 694 204 68 0 chr13 104989553 104989685 -15294627 - B1_Mur1 SINE Alu -7 142 2 1 1386 216 0 0 0 chr13 104989897 104989921 -15294391 + (T)n Simple_repeat Simple_repeat 1 24 0 1 1386 327 283 19 39 chr13 104990566 104990669 -15293643 + ID_B1 SINE B4 124 224 0 1 1386 25 75 0 0 chr13 104990968 104991021 -15293291 + AT_rich Low_complexity Low_complexity 1 53 0 1 1386 21 0 0 0 chr13 104992780 104992801 -15291511 + AT_rich Low_complexity Low_complexity 1 21 0 1 1386 21 0 0 0 chr13 104992867 104992888 -15291424 + AT_rich Low_complexity Low_complexity 1 21 0 1 1386 307 247 37 12 chr13 104993535 104993617 -15290695 + BC1_Mm scRNA scRNA 5 88 -64 1 1386 1334 70 5 36 chr13 104993879 104994071 -15290241 - B2_Mm1t SINE B2 -6 187 2 1 1386 411 284 193 21 chr13 104994305 104994491 -15289821 + ID_B1 SINE B4 3 220 -4 1 1386 216 0 0 0 chr13 104995424 104995448 -15288864 + (A)n Simple_repeat Simple_repeat 1 24 0 1 1386 213 39 0 0 chr13 104996657 104996683 -15287629 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1386 330 294 9 105 chr13 104996744 104996858 -15287454 + PB1D10 SINE Alu 15 117 0 1 1386 250 313 40 20 chr13 104996868 104996969 -15287343 - MIR SINE MIR -66 142 40 1 1386 21 36 0 0 chr13 104998159 104998187 -15286125 + AT_rich Low_complexity Low_complexity 1 28 0 1 1386 679 125 92 42 chr13 104998417 104998559 -15285753 + B1_Mur3 SINE Alu 1 149 0 1 1386 899 26 0 0 chr13 104999068 104999182 -15285130 - B1_Mus1 SINE Alu 0 148 35 1 1386 304 38 19 0 chr13 104999947 105000000 -15284312 - L1Md_F3 LINE L1 0 6584 6531 1 1386 1813 49 0 13 chr13 105000000 105000229 -15284083 - L1Md_F3 LINE L1 -54 6530 6305 1 1386 3443 224 130 29 chr13 105000602 105001057 -15283255 + Lx9 LINE L1 6439 6978 -666 2 1386 267 54 0 0 chr13 105001057 105001094 -15283218 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 3 1386 3443 224 130 29 chr13 105001094 105001613 -15282699 + Lx9 LINE L1 6979 7512 -132 2 1386 22 80 0 0 chr13 105001927 105001977 -15282335 + AT_rich Low_complexity Low_complexity 1 50 0 4 1386 229 314 0 14 chr13 105003016 105003087 -15281225 - ID4_ SINE ID -8 75 6 5 1386 327 313 157 0 chr13 105003840 105003987 -15280325 + B4A SINE B4 3 172 -120 6 1386 515 326 0 34 chr13 105004149 105004295 -15280017 + RSINE1 SINE B4 8 148 -17 7 1386 1247 234 126 53 chr13 105004450 105004821 -15279491 + L1MC1 LINE L1 5186 5604 -729 8 1386 580 77 0 28 chr13 105004821 105004928 -15279384 + L1_Mus4 LINE L1 6532 6635 -1 9 1386 1247 224 133 58 chr13 105004928 105005012 -15279300 + L1MC1 LINE L1 5605 5667 -666 8 1386 402 21 0 0 chr13 105005012 105005059 -15279253 + (CACG)n Simple_repeat Simple_repeat 2 48 0 1 1386 1247 225 132 58 chr13 105005059 105005259 -15279053 + L1MC1 LINE L1 5668 5884 -460 8 1386 998 139 12 0 chr13 105005259 105005432 -15278880 + GA-rich Low_complexity Low_complexity 2 176 0 1 1386 195 42 0 0 chr13 105005433 105005457 -15278855 + (GAAAA)n Simple_repeat Simple_repeat 1 24 0 1 1386 1013 259 124 70 chr13 105005457 105005530 -15278782 + L1MC1 LINE L1 5885 5954 -390 8 1386 417 208 241 28 chr13 105005718 105005904 -15278408 + L1MC1 LINE L1 6099 6333 -11 8 1386 718 249 172 30 chr13 105006216 105006518 -15277794 + MER2 DNA MER2_type 1 345 0 1 1386 180 0 0 0 chr13 105006874 105006894 -15277418 + (T)n Simple_repeat Simple_repeat 1 20 0 1 1386 307 289 33 50 chr13 105007569 105007689 -15276623 + PB1D7 SINE Alu 1 118 -2 1 1386 1342 82 5 11 chr13 105008034 105008219 -15276093 + B2_Mm1a SINE B2 1 184 -9 1 1386 383 289 184 0 chr13 105008347 105008461 -15275851 + B1F SINE Alu 1 135 -14 1 1386 788 276 0 11 chr13 105008621 105008804 -15275508 - B3A SINE B2 -16 182 2 1 1386 270 303 49 0 chr13 105009959 105010101 -15274211 + L1MEe LINE L1 150 298 -4556 1 1386 380 250 25 0 chr13 105010746 105010826 -15273486 - ID4_ SINE ID 0 83 2 2 1386 469 291 88 32 chr13 105011188 105011405 -15272907 - MARNA DNA Mariner -82 504 276 2 1386 560 215 29 0 chr13 105012064 105012203 -15272109 + B1_Mus2 SINE Alu 1 148 -1 2 1386 1236 70 0 0 chr13 105012361 105012886 -15271426 + (CA)n Simple_repeat Simple_repeat 1 525 0 2 1386 303 328 8 94 chr13 105013372 105013500 -15270812 - PB1D10 SINE Alu 0 117 1 2 1386 323 278 0 76 chr13 105013396 105013501 -15270811 - ID_B1 SINE B4 -47 177 81 2 1386 332 263 71 71 chr13 105013636 105013763 -15270549 + PB1 SINE Alu 1 127 0 2 1386 183 62 60 40 chr13 105014172 105014222 -15270090 + A-rich Low_complexity Low_complexity 3 53 0 2 1386 276 329 139 13 chr13 105014435 105014586 -15269726 + L2 LINE L2 2672 2841 -578 2 1386 913 252 28 32 chr13 105015183 105015400 -15268912 + B3 SINE B2 1 216 0 2 1386 461 327 41 18 chr13 105015762 105015933 -15268379 - B3A SINE B2 -23 175 1 3 1386 235 239 0 0 chr13 105016555 105016601 -15267711 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 3 1386 465 287 66 59 chr13 105016965 105017117 -15267195 + RSINE1 SINE B4 4 156 -9 3 1386 186 43 0 0 chr13 105017193 105017216 -15267096 + (TAA)n Simple_repeat Simple_repeat 2 24 0 3 1386 21 0 0 0 chr13 105018495 105018516 -15265796 + AT_rich Low_complexity Low_complexity 1 21 0 3 1386 277 329 66 36 chr13 105019504 105019671 -15264641 - L1M5 LINE L1 -1461 4685 4514 3 1386 433 234 8 59 chr13 105020148 105020266 -15264046 - PB1D9 SINE Alu -8 112 1 3 1386 385 335 6 19 chr13 105020289 105020447 -15263865 + L2 LINE L2 1463 1618 -1801 3 1386 946 181 76 48 chr13 105020463 105020712 -15263600 - L1M2 LINE L1 -532 5768 5513 3 1386 21 0 0 0 chr13 105021044 105021065 -15263247 + AT_rich Low_complexity Low_complexity 1 21 0 3 1386 23 33 0 0 chr13 105022894 105022924 -15261388 + AT_rich Low_complexity Low_complexity 1 30 0 4 1386 444 19 0 0 chr13 105022930 105022983 -15261329 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 1386 198 0 0 0 chr13 105022983 105023004 -15261308 + (GA)n Simple_repeat Simple_repeat 1 22 0 4 1386 745 301 225 38 chr13 105023012 105023485 -15260827 - MER68 LTR ERVL 0 563 3 4 1386 347 331 129 0 chr13 105023532 105023671 -15260641 - ID_B1 SINE B4 -2 222 66 4 1386 21 0 0 0 chr13 105024481 105024502 -15259810 + AT_rich Low_complexity Low_complexity 1 21 0 4 1386 463 284 123 30 chr13 105024608 105024881 -15259431 - L1MDa LINE L1 -4855 1778 1476 4 1386 1734 329 112 28 chr13 105026696 105027383 -15256929 - MER21B LTR ERV1 -105 758 14 4 1386 245 277 122 41 chr13 105027384 105027482 -15256830 + PB1D7 SINE Alu 7 112 -8 4 1386 697 215 7 7 chr13 105027579 105027715 -15256597 + B1_Mus1 SINE Alu 9 144 -4 4 1386 327 65 0 0 chr13 105027718 105027764 -15256548 + (CAAAC)n Simple_repeat Simple_repeat 4 49 0 5 1386 3236 36 10 5 chr13 105028146 105028540 -15255772 + MTA_Mm LTR MaLR 1 396 0 5 1386 234 0 0 0 chr13 105029117 105029143 -15255169 + (CAA)n Simple_repeat Simple_repeat 2 27 0 5 1386 1251 27 0 0 chr13 105029347 105029493 -15254819 + B1_Mm SINE Alu 2 147 0 5 1386 183 42 0 0 chr13 105029493 105029517 -15254795 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1386 234 0 0 0 chr13 105029679 105029705 -15254607 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 1386 1207 99 35 0 chr13 105029705 105029876 -15254436 - B2_Mm2 SINE B2 -17 178 2 5 1386 735 166 45 79 chr13 105030010 105030187 -15254125 - B2_Mm2 SINE B2 -21 174 4 5 1386 292 216 70 72 chr13 105030188 105030398 -15253914 - L1M4 LINE L1 -3166 2980 2767 5 1386 1813 158 92 3 chr13 105030546 105030883 -15253429 - ORR1B2 LTR MaLR 0 367 1 5 1386 1208 255 176 48 chr13 105031145 105031623 -15252689 - RLTR20A LTR ERVK -2 539 1 6 1386 21 71 0 0 chr13 105033123 105033165 -15251147 + AT_rich Low_complexity Low_complexity 1 42 0 6 1386 242 250 27 27 chr13 105033200 105033274 -15251038 - RSINE1 SINE B4 -14 151 78 6 1386 504 257 123 0 chr13 105033317 105033496 -15250816 - MLT1B LTR MaLR 0 390 190 6 1386 22 70 0 0 chr13 105034272 105034315 -15249997 + AT_rich Low_complexity Low_complexity 1 43 0 6 1386 583 221 9 9 chr13 105034353 105034458 -15249854 - B3 SINE B2 -111 105 1 6 1386 23 33 0 0 chr13 105034465 105034495 -15249817 + AT_rich Low_complexity Low_complexity 1 30 0 6 1386 392 104 0 15 chr13 105034600 105034668 -15249644 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 1386 244 307 88 0 chr13 105034802 105034916 -15249396 + L3 LINE CR1 4053 4176 -313 6 1386 248 0 31 0 chr13 105035130 105035162 -15249150 + (TATAA)n Simple_repeat Simple_repeat 1 33 0 6 1386 719 162 65 14 chr13 105035511 105035649 -15248663 + B1_Mus2 SINE Alu 3 147 0 7 1386 22 56 0 0 chr13 105035774 105035810 -15248502 + AT_rich Low_complexity Low_complexity 1 36 0 7 1386 308 88 0 17 chr13 105035915 105035973 -15248339 + (TTAG)n Simple_repeat Simple_repeat 1 57 0 7 1386 276 30 0 0 chr13 105035973 105036005 -15248307 + (TGG)n Simple_repeat Simple_repeat 2 34 0 7 1386 1185 36 0 0 chr13 105036005 105036145 -15248167 - B1_Mm SINE Alu -7 140 1 7 1386 1871 220 78 47 chr13 105036238 105036792 -15247520 - Lx7 LINE L1 0 7696 7126 7 1386 28 29 0 0 chr13 105036846 105036881 -15247431 + AT_rich Low_complexity Low_complexity 1 35 0 7 1386 493 328 17 0 chr13 105037032 105037151 -15247161 + RSINE1 SINE B4 4 124 -41 7 1386 22 56 0 0 chr13 105037403 105037439 -15246873 + AT_rich Low_complexity Low_complexity 1 36 0 7 1386 249 267 67 0 chr13 105037473 105037548 -15246764 - ID4 SINE ID -2 81 2 7 1386 25 65 0 0 chr13 105037548 105037594 -15246718 + AT_rich Low_complexity Low_complexity 1 46 0 8 1386 546 198 17 17 chr13 105038580 105038760 -15245552 + (TA)n Simple_repeat Simple_repeat 1 180 0 8 1386 28 29 0 0 chr13 105040124 105040159 -15244153 + AT_rich Low_complexity Low_complexity 1 35 0 8 1386 296 241 0 0 chr13 105040162 105040220 -15244092 - ID4_ SINE ID 0 83 26 8 1386 811 171 20 0 chr13 105040306 105040452 -15243860 + B1_Mur2 SINE Alu 1 149 0 8 1386 358 295 13 0 chr13 105040587 105040665 -15243647 - ID SINE ID -144 80 2 8 1386 248 262 23 70 chr13 105040936 105041022 -15243290 + ID2 SINE ID 1 82 -1 8 1386 255 318 45 36 chr13 105041085 105041196 -15243116 - PB1D7 SINE Alu -8 112 1 8 1386 842 200 62 28 chr13 105041307 105041518 -15242794 + ID_B1 SINE B4 3 220 -4 8 1386 437 255 47 24 chr13 105041634 105041803 -15242509 - B3 SINE B2 0 216 1 8 1386 3250 46 0 135 chr13 105042964 105043468 -15240844 + RLTR10C LTR ERVK 1 436 0 9 1386 436 320 52 13 chr13 105043676 105043831 -15240481 + B3A SINE B2 1 161 -37 9 1386 839 183 205 48 chr13 105043886 105044051 -15240261 + RMER6D LTR ERVK 1 213 -507 9 1386 6311 46 1 10 chr13 105044051 105044871 -15239441 - L1Md_F2 LINE L1 0 6582 5785 9 1386 839 183 205 48 chr13 105044871 105044997 -15239315 + RMER6D LTR ERVK 214 338 -382 9 1386 6116 16 4 1 chr13 105044997 105045705 -15238607 + L1_Mm LINE L1 5078 5787 -96 9 1386 2035 189 92 17 chr13 105045705 105046183 -15238129 + RMER6D LTR ERVK 207 720 0 9 1386 267 238 150 0 chr13 105046184 105046264 -15238048 + L1MC LINE L1 4037 4128 -2018 9 1386 2040 139 18 3 chr13 105046264 105046603 -15237709 + ORR1A1 LTR MaLR 1 344 -2 9 1386 388 235 257 0 chr13 105046780 105046916 -15237396 + MTE2a LTR MaLR 1 171 -208 9 1386 1142 76 0 0 chr13 105046927 105047072 -15237240 + B1_Mus1 SINE Alu 2 146 -2 9 1386 203 194 0 0 chr13 105047073 105047109 -15237203 + A-rich Low_complexity Low_complexity 1 36 0 1 1386 535 308 0 14 chr13 105047113 105047261 -15237051 + RSINE1 SINE B4 3 148 -17 1 1386 312 120 0 0 chr13 105047277 105047327 -15236985 + (TG)n Simple_repeat Simple_repeat 2 51 0 1 1386 317 306 95 105 chr13 105047354 105047544 -15236768 + MTE2a LTR MaLR 167 354 -25 9 1386 1208 107 13 8 chr13 105047569 105047764 -15236548 + B2_Mm2 SINE B2 2 203 -13 1 1386 228 67 0 0 chr13 105047781 105047811 -15236501 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1386 748 261 45 14 chr13 105047879 105048100 -15236212 + MTE-int LTR MaLR 5 232 -1348 1 1386 1173 189 91 0 chr13 105048067 105048321 -15235991 - MTC LTR MaLR -144 277 1 1 1386 1152 98 40 6 chr13 105048372 105048546 -15235766 + B2_Mm2 SINE B2 7 186 -9 1 1386 1033 122 0 0 chr13 105048565 105048712 -15235600 + B1_Mus1 SINE Alu 2 148 0 1 1386 204 125 0 0 chr13 105048714 105048746 -15235566 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 1 1386 856 153 271 0 chr13 105048762 105048932 -15235380 + B3 SINE B2 1 216 0 1 1386 252 293 299 0 chr13 105048946 105049103 -15235209 + MTE-int LTR MaLR 615 818 -762 1 1386 480 243 39 0 chr13 105049127 105049230 -15235082 - ORR1D2 LTR MaLR -263 107 1 1 1386 809 290 150 22 chr13 105049230 105049819 -15234493 + MTE-int LTR MaLR 869 1574 -6 1 1386 435 186 123 5 chr13 105049854 105049955 -15234357 - B1_Mur2 SINE Alu -12 108 1 1 1386 231 204 20 0 chr13 105049955 105050004 -15234308 + MTE2a-int LTR MaLR 1205 1254 -4 1 1386 1509 245 48 17 chr13 105050018 105050375 -15233937 + MTE2a LTR MaLR 6 373 -6 1 1386 2999 39 13 5 chr13 105050375 105050761 -15233551 - MTA_Mm LTR MaLR -7 389 1 1 1386 391 248 135 11 chr13 105050766 105051034 -15233278 + L1MC LINE L1 4415 4715 -1431 1 1386 313 247 0 18 chr13 105051065 105051172 -15233140 + L1MC LINE L1 5348 5448 -731 1 1386 243 0 0 0 chr13 105051431 105051458 -15232854 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1386 1066 58 0 0 chr13 105051458 105051596 -15232716 - B1_Mus2 SINE Alu -8 139 2 1 1386 426 219 16 95 chr13 105051485 105051611 -15232701 - MT2B LTR ERVL -337 264 149 1 1386 638 217 241 0 chr13 105051682 105051848 -15232464 + B3 SINE B2 1 206 -10 1 1386 1250 240 96 48 chr13 105051894 105052270 -15232042 - MTD LTR MaLR -14 405 12 1 1386 1431 73 0 0 chr13 105052506 105052697 -15231615 + L1_Mus1 LINE L1 6377 6567 0 1 1386 1109 94 77 6 chr13 105052812 105052993 -15231319 + L1Md_F2 LINE L1 6385 6578 -4 1 1386 259 218 114 44 chr13 105053036 105053169 -15231143 - L1MC LINE L1 -810 5336 5191 1 1386 908 142 0 26 chr13 105053169 105053321 -15230991 - B1_Mus1 SINE Alu 0 148 1 1 1386 251 228 203 84 chr13 105053321 105053498 -15230814 - L1MC LINE L1 -956 5190 4989 1 1386 432 82 0 0 chr13 105053498 105053559 -15230753 + (TG)n Simple_repeat Simple_repeat 1 61 0 1 1386 471 222 36 80 chr13 105053752 105053783 -15230529 - B1_Mus2 SINE Alu -14 133 113 1 1386 1414 67 0 35 chr13 105053783 105053984 -15230328 - B2_Mm2 SINE B2 0 195 2 1 1386 471 222 36 80 chr13 105053984 105054089 -15230223 - B1_Mus2 SINE Alu -35 112 3 1 1386 284 320 31 15 chr13 105054177 105054307 -15230005 + L1MC4a LINE L1 7290 7421 -461 1 1386 911 232 58 0 chr13 105054823 105055030 -15229282 + URR1B DNA MER1_type 7 225 0 1 1386 270 0 0 0 chr13 105055248 105055278 -15229034 + (TG)n Simple_repeat Simple_repeat 2 31 0 1 1386 480 326 46 82 chr13 105056015 105056296 -15228016 - ORR1E LTR MaLR -50 309 39 1 1386 2429 301 71 55 chr13 105056305 105057163 -15227149 - MTE-int LTR MaLR -41 1539 668 1 1386 1879 134 3 3 chr13 105057163 105057455 -15226857 - L1_Mm LINE L1 -297 5586 5295 1 1386 671 60 0 0 chr13 105057443 105057527 -15226785 - L1Md_F2 LINE L1 -300 6282 6199 1 1386 2297 150 24 5 chr13 105057525 105057940 -15226372 - L1_Mur2 LINE L1 -577 5300 4878 1 1386 7729 75 8 1 chr13 105057940 105058975 -15225337 + L1_Mus3 LINE L1 5587 6628 -10 1 1386 1235 287 81 60 chr13 105058975 105059050 -15225262 - MTE-int LTR MaLR -900 680 614 1 1386 1461 48 21 0 chr13 105059050 105059236 -15225076 - B2_Mm1a SINE B2 -2 191 2 1 1386 1235 293 84 51 chr13 105059236 105059747 -15224565 - MTE-int LTR MaLR -967 613 1 1 1386 21 0 0 0 chr13 105059809 105059830 -15224482 + AT_rich Low_complexity Low_complexity 1 21 0 1 1386 3477 60 7 0 chr13 105059830 105060266 -15224046 - L1_Mus1 LINE L1 -2 6565 6127 1 1386 230 302 30 121 chr13 105060271 105060403 -15223909 - ORR1E LTR MaLR -65 294 175 1 1386 21 0 0 0 chr13 105060976 105060997 -15223315 + AT_rich Low_complexity Low_complexity 1 21 0 1 1386 226 293 0 0 chr13 105061476 105061534 -15222778 + PB1 SINE Alu 63 120 -7 1 1386 484 287 31 8 chr13 105062465 105062595 -15221717 - B4 SINE B4 -159 133 1 1 1386 22 35 0 0 chr13 105062602 105062631 -15221681 + AT_rich Low_complexity Low_complexity 1 29 0 1 1386 1013 246 0 0 chr13 105062820 105063035 -15221277 - B3 SINE B2 0 216 2 1 1386 284 198 12 12 chr13 105063071 105063153 -15221159 - L1MEg LINE L1 -4467 1617 1536 1 1386 238 268 0 44 chr13 105063205 105063295 -15221017 + L1_Rod LINE L1 4170 4255 -1592 1 1386 342 244 8 16 chr13 105063394 105063519 -15220793 + (TA)n Simple_repeat Simple_repeat 1 124 0 1 1386 369 62 0 0 chr13 105063567 105063615 -15220697 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1386 255 228 12 37 chr13 105063615 105063697 -15220615 - L1_Rod LINE L1 -768 5079 5000 1 1386 8712 77 85 52 chr13 105063783 105064302 -15220010 - MusHAL1 LINE L1 -99 2613 2076 1 1386 1453 40 57 0 chr13 105064302 105064479 -15219833 - B2_Mm1t SINE B2 -5 188 2 1 1386 8712 77 85 52 chr13 105064479 105065443 -15218869 - MusHAL1 LINE L1 -637 2075 1081 1 1386 38653 27 4 3 chr13 105065446 105070321 -15213991 - L1Md_A LINE L1 -2 6580 1702 1 1386 1613 42 0 0 chr13 105070321 105070514 -15213798 - B2_Mm1t SINE B2 0 193 1 1 1386 38653 76 4 65 chr13 105070514 105071813 -15212499 - L1Md_A LINE L1 -4182 1701 487 1 1386 448 305 8 8 chr13 105071867 105071996 -15212316 + ID_B1 SINE B4 90 218 -6 1 1386 1698 21 0 0 chr13 105072255 105072446 -15211866 + B2_Mm1a SINE B2 1 191 -2 1 1386 21 36 0 0 chr13 105072548 105072576 -15211736 + AT_rich Low_complexity Low_complexity 1 28 0 1 1386 262 31 0 0 chr13 105072734 105072766 -15211546 - U6 snRNA snRNA -75 32 1 1 1386 331 284 119 69 chr13 105072806 105073067 -15211245 + B4 SINE B4 1 274 -18 1 1386 667 250 33 0 chr13 105073149 105073301 -15211011 - ID_B1 SINE B4 -4 220 64 1 1386 393 319 9 0 chr13 105073341 105073454 -15210858 - PB1D7 SINE Alu 0 120 7 1 1386 616 97 133 19 chr13 105073586 105073691 -15210621 - PB1D9 SINE Alu 0 120 4 1 1386 27 49 0 0 chr13 105073767 105073808 -15210504 + AT_rich Low_complexity Low_complexity 1 41 0 1 1386 210 143 0 0 chr13 105073848 105073883 -15210429 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 1 1386 213 218 200 0 chr13 105073907 105073962 -15210350 - ID4 SINE ID -17 66 1 1 1386 562 289 57 36 chr13 105074379 105074573 -15209739 + B3A SINE B2 1 198 0 1 1386 510 214 131 0 chr13 105074654 105074822 -15209490 + L1MA8 LINE L1 5997 6186 -105 1 1386 314 299 41 0 chr13 105074832 105074929 -15209383 - BC1_Mm scRNA scRNA -49 103 3 1 1386 24 32 0 0 chr13 105074999 105075030 -15209282 + AT_rich Low_complexity Low_complexity 1 31 0 1 1386 275 26 51 0 chr13 105076384 105076423 -15207889 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 1 1386 180 111 0 0 chr13 105077377 105077404 -15206908 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1386 333 118 0 0 chr13 105077487 105077538 -15206774 + (T)n Simple_repeat Simple_repeat 1 51 0 1 1386 782 98 8 0 chr13 105077835 105077957 -15206355 + (TC)n Simple_repeat Simple_repeat 2 124 0 1 1386 273 304 43 11 chr13 105080594 105080687 -15203625 - MIRb SINE MIR -70 198 103 1 1386 265 344 52 59 chr13 105081303 105081439 -15202873 + MamSINE1 SINE tRNA 115 249 -41 1 1386 282 342 149 65 chr13 105082009 105082284 -15202028 - MLT1E3 LTR MaLR 0 624 327 1 1386 1089 66 0 0 chr13 105082537 105082673 -15201639 + B1_Mus1 SINE Alu 2 137 -11 1 1386 260 27 27 0 chr13 105082673 105082710 -15201602 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 1 1386 22 0 0 0 chr13 105085606 105085628 -15198684 + AT_rich Low_complexity Low_complexity 1 22 0 1 1386 470 266 165 21 chr13 105085790 105085978 -15198334 + B3 SINE B2 1 215 -1 1 1386 634 275 74 51 chr13 105086024 105086335 -15197977 - L1MB8 LINE L1 -1 6177 5860 1 1386 429 157 24 0 chr13 105086371 105086454 -15197858 + B1_Mus2 SINE Alu 31 115 -32 1 1386 201 147 0 0 chr13 105086512 105086546 -15197766 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1 1386 213 39 0 0 chr13 105086678 105086704 -15197608 + (TG)n Simple_repeat Simple_repeat 2 27 0 1 1386 277 299 20 30 chr13 105086704 105086804 -15197508 - L1M2 LINE L1 -540 5643 5545 1 1386 22 0 0 0 chr13 105086972 105086994 -15197318 + AT_rich Low_complexity Low_complexity 1 22 0 1 1386 946 295 157 30 chr13 105088065 105088878 -15195434 - L1_Mur3 LINE L1 -54 5826 4910 1 1386 1585 228 46 80 chr13 105088924 105089335 -15194977 + MTD LTR MaLR 20 416 -3 1 1386 808 277 48 38 chr13 105089352 105089750 -15194562 - L1M2 LINE L1 -1306 4837 4436 1 1386 1402 120 0 18 chr13 105089931 105090152 -15194160 - Lx2 LINE L1 -6 6991 6775 1 1386 6506 116 34 25 chr13 105090152 105091451 -15192861 - Lx2 LINE L1 -354 6643 5331 1 1386 6436 75 23 4 chr13 105091440 105092975 -15191337 - L1VL4 LINE L1 -1770 1789 222 1 1386 247 182 0 13 chr13 105093449 105093476 -15190836 - RMER17C LTR ERVK -150 260 234 1 1386 333 0 0 0 chr13 105093476 105093513 -15190799 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1386 247 182 0 13 chr13 105093513 105093563 -15190749 - RMER17C LTR ERVK -177 233 184 1 1386 324 98 0 0 chr13 105095067 105095100 -15189212 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1386 1112 96 0 0 chr13 105095100 105095246 -15189066 - B1_Mus2 SINE Alu 0 147 2 1 1386 324 98 0 0 chr13 105095246 105095263 -15189049 + (T)n Simple_repeat Simple_repeat 1 17 0 1 1386 200 128 26 0 chr13 105095373 105095412 -15188900 + T-rich Low_complexity Low_complexity 3 42 0 1 1386 1219 48 0 0 chr13 105095413 105095560 -15188752 - B1_Mus2 SINE Alu 0 147 1 1 1386 211 265 0 0 chr13 105095620 105095669 -15188643 - MIR3 SINE MIR -5 203 155 1 1386 961 149 12 0 chr13 105096355 105096516 -15187796 + B2_Mm2 SINE B2 14 176 -19 1 1386 205 312 63 28 chr13 105096537 105096679 -15187633 + L3 LINE CR1 2046 2192 -2297 1 1386 340 276 0 0 chr13 105098473 105098549 -15185763 - B1_Mur1 SINE Alu -5 144 69 2 1386 523 87 46 55 chr13 105099083 105099192 -15185120 - Lx LINE L1 -4 6650 6543 2 1386 1745 164 75 38 chr13 105099193 105099391 -15184921 - RLTR28 LTR ERVL -120 404 217 2 1386 1299 99 21 0 chr13 105099391 105099582 -15184730 - B2_Mm2 SINE B2 0 195 1 2 1386 1745 164 75 38 chr13 105099582 105099756 -15184556 - RLTR28 LTR ERVL -308 216 18 2 1386 339 25 0 0 chr13 105100397 105100437 -15183875 + (CAAAA)n Simple_repeat Simple_repeat 3 42 0 2 1386 22 0 0 0 chr13 105100852 105100874 -15183438 + AT_rich Low_complexity Low_complexity 1 22 0 2 1386 41 0 0 0 chr13 105100967 105101008 -15183304 + AT_rich Low_complexity Low_complexity 1 41 0 2 1386 1909 210 60 73 chr13 105101132 105101681 -15182631 + Lx9 LINE L1 7096 7637 -7 2 1386 401 297 28 35 chr13 105101800 105101943 -15182369 - B4A SINE B4 0 292 151 2 1386 333 0 0 0 chr13 105102165 105102202 -15182110 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2 1386 759 204 15 0 chr13 105102202 105102334 -15181978 - B1_Mur4 SINE Alu -12 138 5 2 1386 22 56 0 0 chr13 105103069 105103105 -15181207 + AT_rich Low_complexity Low_complexity 1 36 0 2 1386 518 178 210 8 chr13 105103258 105103377 -15180935 - B1_Mm SINE Alu 0 147 5 2 1386 575 303 37 26 chr13 105104949 105105139 -15179173 + B3A SINE B2 2 193 -5 2 1386 21 0 0 0 chr13 105105313 105105334 -15178978 + AT_rich Low_complexity Low_complexity 1 21 0 2 1386 373 270 79 26 chr13 105105430 105105544 -15178768 - PB1 SINE Alu -2 125 6 2 1386 4170 226 79 12 chr13 105105635 105106284 -15178028 - Lx6 LINE L1 -607 6853 6175 2 1386 264 30 0 0 chr13 105106284 105106317 -15177995 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1386 4170 226 79 12 chr13 105106317 105106723 -15177589 - Lx6 LINE L1 -1286 6174 5729 2 1386 2095 183 13 5 chr13 105107361 105107734 -15176578 - Lx2 LINE L1 -81 6916 6541 2 1386 6968 138 7 3 chr13 105107731 105109554 -15174758 + Lx LINE L1 4816 6646 -8 2 1386 387 41 0 0 chr13 105109561 105109610 -15174702 + (GA)n Simple_repeat Simple_repeat 2 50 0 2 1386 342 218 102 29 chr13 105109630 105109767 -15174545 + L1MA8 LINE L1 5993 6139 -152 2 1386 1081 315 35 51 chr13 105109791 105109928 -15174384 - Lx8 LINE L1 -1 7472 7348 2 1386 702 244 84 45 chr13 105109928 105110130 -15174182 - B3 SINE B2 -5 211 2 2 1386 1081 315 35 51 chr13 105110130 105110558 -15173754 - Lx8 LINE L1 -126 7347 6916 2 1386 388 230 37 48 chr13 105110557 105110698 -15173614 + L1MA8 LINE L1 6124 6267 -24 2 1386 660 26 0 0 chr13 105111012 105111090 -15173222 + (GA)n Simple_repeat Simple_repeat 1 78 0 2 1386 432 332 165 18 chr13 105111170 105111498 -15172814 - L2 LINE L2 -889 2530 2155 2 1386 5438 82 9 5 chr13 105111821 105112591 -15171721 - L1_Mus3 LINE L1 -3 6635 5863 2 1386 30934 126 9 27 chr13 105112594 105119000 -15165312 - L1_Mus3 LINE L1 -15 6623 348 2 1386 1630 236 112 26 chr13 105119057 105119619 -15164693 - L1VL4 LINE L1 -5535 1025 512 2 1387 248 0 0 30 chr13 105119752 105119785 -15164527 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 2 1387 190 284 86 0 chr13 105120889 105120970 -15163342 + MIRc SINE MIR 174 261 -7 2 1387 25 0 0 0 chr13 105121094 105121119 -15163193 + AT_rich Low_complexity Low_complexity 1 25 0 2 1387 26 0 0 0 chr13 105121154 105121180 -15163132 + AT_rich Low_complexity Low_complexity 1 26 0 2 1387 1357 108 56 0 chr13 105121180 105121393 -15162919 + Lx3_Mus LINE L1 6771 6995 -14 2 1387 22 0 0 0 chr13 105121522 105121544 -15162768 + AT_rich Low_complexity Low_complexity 1 22 0 2 1387 245 217 12 0 chr13 105122584 105122667 -15161645 + (TG)n Simple_repeat Simple_repeat 2 85 0 2 1387 1187 55 0 0 chr13 105123124 105123270 -15161042 - B1_Mus2 SINE Alu -1 146 1 2 1387 3376 108 37 2 chr13 105123436 105123948 -15160364 - Lx LINE L1 0 6654 6125 2 1387 4542 165 18 12 chr13 105123950 105124785 -15159527 + L1_Mm LINE L1 4538 5377 -506 2 1387 1271 164 112 56 chr13 105124914 105125218 -15159094 + L1_Mur2 LINE L1 3625 3945 -1932 2 1387 446 262 185 6 chr13 105125226 105125399 -15158913 + ORR1E-int LTR MaLR 1350 1553 -27 2 1387 678 288 80 74 chr13 105125378 105125730 -15158582 + ORR1E LTR MaLR 6 359 0 2 1387 2162 158 47 15 chr13 105125833 105126239 -15158073 + MTC LTR MaLR 1 419 -2 2 1387 593 176 0 179 chr13 105126483 105126628 -15157684 + MTC LTR MaLR 6 124 -297 2 1387 212 306 0 0 chr13 105127214 105127263 -15157049 - AmnSINE1 SINE SINE -488 87 39 2 1387 27 29 0 0 chr13 105128244 105128278 -15156034 + AT_rich Low_complexity Low_complexity 1 34 0 2 1387 460 215 42 113 chr13 105128292 105128348 -15155964 + MT2B LTR ERVL 109 152 -449 2 1387 911 57 12 6 chr13 105128348 105128493 -15155819 + B1_Mus1 SINE Alu 2 145 -5 2 1387 629 268 111 0 chr13 105129489 105129679 -15154633 + B3 SINE B2 1 211 -5 2 1387 633 218 18 60 chr13 105129694 105129860 -15154452 - B2_Mm2 SINE B2 -10 185 27 2 1387 971 112 0 7 chr13 105129879 105130031 -15154281 - Lx4A LINE L1 0 7058 6908 2 1387 214 256 0 0 chr13 105130032 105130071 -15154241 - B3 SINE B2 -177 39 1 2 1387 740 231 41 26 chr13 105130529 105130724 -15153588 - B3A SINE B2 0 198 1 2 1387 196 304 194 65 chr13 105130777 105130963 -15153349 - MIRc SINE MIR -30 238 29 2 1387 509 325 30 35 chr13 105132826 105132995 -15151317 + B3A SINE B2 1 168 -30 2 1387 25 0 0 0 chr13 105133460 105133485 -15150827 + AT_rich Low_complexity Low_complexity 1 25 0 2 1387 24 53 0 0 chr13 105133513 105133551 -15150761 + AT_rich Low_complexity Low_complexity 1 38 0 2 1387 465 215 129 24 chr13 105133646 105133770 -15150542 + B4A SINE B4 138 274 -18 2 1387 878 128 6 0 chr13 105133787 105133959 -15150353 + (GA)n Simple_repeat Simple_repeat 2 174 0 2 1387 1461 289 49 5 chr13 105134628 105135039 -15149273 - Lx8 LINE L1 -244 7229 6801 2 1387 257 216 147 13 chr13 105135103 105135178 -15149134 + MTC LTR MaLR 337 421 0 2 1387 222 320 0 13 chr13 105135287 105135363 -15148949 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 1387 248 324 0 0 chr13 105135586 105135657 -15148655 + (TG)n Simple_repeat Simple_repeat 2 72 0 2 1387 21 36 0 0 chr13 105135766 105135794 -15148518 + AT_rich Low_complexity Low_complexity 1 28 0 2 1387 25 0 0 0 chr13 105135829 105135854 -15148458 + AT_rich Low_complexity Low_complexity 1 25 0 2 1387 441 241 127 7 chr13 105135859 105136001 -15148311 - Charlie2a DNA MER1_type -1248 1613 1455 2 1387 597 311 43 71 chr13 105136121 105136401 -15147911 - Charlie2a DNA MER1_type -2508 353 82 2 1387 602 191 34 41 chr13 105136577 105136724 -15147588 - Lx7 LINE L1 0 7696 7551 2 1387 180 0 0 0 chr13 105136725 105136745 -15147567 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2 1387 180 0 0 0 chr13 105137476 105137496 -15146816 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 2 1387 216 303 0 43 chr13 105138746 105138815 -15145497 + MIRb SINE MIR 126 191 -77 2 1387 1656 21 0 16 chr13 105139041 105139235 -15145077 - B2_Mm1t SINE B2 -1 192 2 2 1387 347 47 0 0 chr13 105139426 105139469 -15144843 - MTB LTR MaLR 0 400 358 2 1387 22 35 0 0 chr13 105139487 105139516 -15144796 + AT_rich Low_complexity Low_complexity 1 29 0 2 1387 582 137 0 0 chr13 105139530 105139625 -15144687 + (TA)n Simple_repeat Simple_repeat 1 95 0 2 1387 28 71 0 0 chr13 105139685 105139741 -15144571 + AT_rich Low_complexity Low_complexity 1 56 0 2 1387 1579 38 0 0 chr13 105140250 105140436 -15143876 + B2_Mm1a SINE B2 1 186 -7 2 1387 849 92 0 0 chr13 105140813 105140933 -15143379 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 2 1387 618 109 0 0 chr13 105140933 105141025 -15143287 + (TCCC)n Simple_repeat Simple_repeat 3 94 0 2 1387 4112 88 16 4 chr13 105141030 105141591 -15142721 - L1_Mus3 LINE L1 -7 6631 6064 2 1387 462 261 81 0 chr13 105143296 105143407 -15140905 - B1F SINE Alu -29 120 1 2 1387 627 108 0 0 chr13 105144124 105144217 -15140095 + (TCCC)n Simple_repeat Simple_repeat 4 96 0 2 1387 189 0 0 0 chr13 105144575 105144596 -15139716 + (TTCTG)n Simple_repeat Simple_repeat 4 24 0 2 1387 451 156 0 0 chr13 105144607 105144684 -15139628 - PB1D9 SINE Alu -1 119 43 2 1387 851 258 16 11 chr13 105144881 105145069 -15139243 - B3 SINE B2 -7 209 21 2 1387 666 243 112 15 chr13 105145322 105145541 -15138771 + Lx5 LINE L1 6796 7051 -7 2 1387 252 268 26 90 chr13 105145885 105145963 -15138349 + ID4 SINE ID 10 82 -1 2 1387 312 70 0 0 chr13 105146337 105146380 -15137932 + (TCTCTG)n Simple_repeat Simple_repeat 4 46 0 2 1387 203 156 0 0 chr13 105146383 105146415 -15137897 + (TG)n Simple_repeat Simple_repeat 1 32 0 2 1387 470 265 242 25 chr13 105146417 105146657 -15137655 - B4 SINE B4 0 292 1 2 1387 341 375 9 15 chr13 105147499 105147628 -15136684 - B1F SINE Alu -21 126 3 2 1387 306 0 0 0 chr13 105147644 105147678 -15136634 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2 1387 1269 74 39 11 chr13 105147930 105148108 -15136204 - B2_Mm2 SINE B2 -10 185 3 2 1387 6701 67 10 13 chr13 105148131 105149038 -15135274 - L1_Mus3 LINE L1 -1 6637 5734 2 1387 1101 234 98 0 chr13 105149843 105150168 -15134144 - Lx9 LINE L1 -7 7637 7281 2 1387 591 213 8 8 chr13 105150180 105150308 -15134004 + Lx9 LINE L1 6984 7111 -533 2 1387 23 54 0 0 chr13 105150657 105150694 -15133618 + AT_rich Low_complexity Low_complexity 1 37 0 2 1387 2590 76 6 0 chr13 105151009 105151351 -15132961 - L1_Mm LINE L1 -922 4961 4618 2 1387 4177 57 42 9 chr13 105151351 105151901 -15132411 + L1Md_F2 LINE L1 6003 6570 -12 2 1387 208 240 0 20 chr13 105152021 105152072 -15132240 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1387 290 161 0 0 chr13 105152133 105152195 -15132117 - Lx4A LINE L1 -9 7049 6988 2 1387 563 135 22 0 chr13 105152196 105152285 -15132027 - L1_Mur2 LINE L1 -756 5121 5031 2 1387 371 339 55 122 chr13 105152366 105152678 -15131634 + B4 SINE B4 2 292 0 3 1387 306 311 63 32 chr13 105152980 105153169 -15131143 - L1M2 LINE L1 -2002 4141 3947 3 1387 291 333 38 29 chr13 105154625 105154730 -15129582 + PB1D7 SINE Alu 15 120 0 3 1387 282 372 43 7 chr13 105155256 105155394 -15128918 - Charlie2b DNA MER1_type -2460 322 180 3 1387 29 28 0 0 chr13 105157829 105157865 -15126447 + AT_rich Low_complexity Low_complexity 1 36 0 3 1387 207 226 0 54 chr13 105157992 105158048 -15126264 + L3 LINE CR1 2295 2347 -2142 3 1387 206 32 0 31 chr13 105159038 105159070 -15125242 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 3 1387 182 118 29 0 chr13 105159072 105159106 -15125206 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 3 1387 429 300 35 65 chr13 105161047 105161341 -15122971 - RLTR16 LTR ERVK -257 435 97 3 1387 21 36 0 0 chr13 105161390 105161418 -15122894 + AT_rich Low_complexity Low_complexity 1 28 0 3 1387 725 277 88 69 chr13 105161817 105161833 -15122479 + B4A SINE B4 8 23 -269 3 1387 1239 167 22 13 chr13 105161833 105162057 -15122255 + URR1A DNA MER1_type 1 226 0 3 1387 725 277 88 69 chr13 105162057 105162300 -15122012 + B4A SINE B4 24 272 -20 3 1387 208 225 0 0 chr13 105162486 105162526 -15121786 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1387 489 34 0 0 chr13 105162527 105162586 -15121726 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1387 1296 95 0 26 chr13 105162816 105163010 -15121302 + B2_Mm2 SINE B2 2 190 -5 3 1387 23 101 0 0 chr13 105163812 105163891 -15120421 + AT_rich Low_complexity Low_complexity 1 79 0 3 1387 799 109 20 7 chr13 105164234 105164381 -15119931 + L1_Mus3 LINE L1 6490 6638 0 3 1387 21 82 0 0 chr13 105164398 105164447 -15119865 + AT_rich Low_complexity Low_complexity 1 49 0 3 1387 26 30 0 0 chr13 105164501 105164534 -15119778 + AT_rich Low_complexity Low_complexity 1 33 0 3 1387 24 0 0 0 chr13 105166441 105166465 -15117847 + AT_rich Low_complexity Low_complexity 1 24 0 3 1387 1098 65 0 0 chr13 105166560 105166698 -15117614 + B1_Mus1 SINE Alu 3 140 -8 3 1387 234 180 0 0 chr13 105167084 105167134 -15117178 + T-rich Low_complexity Low_complexity 1 50 0 3 1387 189 107 0 0 chr13 105167318 105167346 -15116966 + (TTA)n Simple_repeat Simple_repeat 1 28 0 3 1387 21 36 0 0 chr13 105167784 105167812 -15116500 + AT_rich Low_complexity Low_complexity 1 28 0 3 1387 5988 68 16 31 chr13 105168212 105169147 -15115165 + L1VL2 LINE L1 198 1115 -2500 3 1387 3194 156 72 4 chr13 105170244 105170803 -15113509 - Lx3C LINE L1 -11 6965 6369 3 1387 194 171 125 28 chr13 105170978 105171050 -15113262 + L2 LINE L2 2646 2724 -695 3 1387 528 312 8 30 chr13 105171195 105171327 -15112985 + RSINE1 SINE B4 2 130 -35 3 1387 723 275 58 78 chr13 105172279 105172587 -15111725 - Lx8 LINE L1 -762 6711 6410 3 1387 22 0 0 0 chr13 105172705 105172727 -15111585 + AT_rich Low_complexity Low_complexity 1 22 0 3 1387 422 319 16 71 chr13 105174095 105174277 -15110035 + Tigger9a DNA Tigger 391 562 -170 3 1387 530 301 28 73 chr13 105175278 105175457 -15108855 + B3A SINE B2 2 172 -21 3 1387 1046 78 28 0 chr13 105176753 105176895 -15107417 + B1_Mm SINE Alu 2 147 0 3 1387 189 0 0 0 chr13 105176895 105176916 -15107396 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1387 1118 191 19 5 chr13 105177300 105177510 -15106802 - B3 SINE B2 0 216 4 3 1387 24 53 0 0 chr13 105177879 105177917 -15106395 + AT_rich Low_complexity Low_complexity 1 38 0 3 1387 21 0 0 0 chr13 105178288 105178309 -15106003 + AT_rich Low_complexity Low_complexity 1 21 0 3 1387 655 165 43 0 chr13 105178309 105178424 -15105888 - ORR1A3-int LTR MaLR -815 1148 1029 3 1387 1114 64 0 7 chr13 105178436 105178578 -15105734 - B1_Mus1 SINE Alu -7 141 1 3 1387 7081 69 29 2 chr13 105178584 105179756 -15104556 - L1_Mus2 LINE L1 0 6566 5362 3 1387 357 299 0 0 chr13 105181447 105181524 -15102788 + ID4 SINE ID 5 81 -2 3 1387 927 155 14 0 chr13 105181931 105182079 -15102233 - B1_Mur4 SINE Alu 0 150 1 3 1387 230 250 13 40 chr13 105182373 105182448 -15101864 + Charlie12 DNA MER1_type 1264 1336 -1537 3 1387 675 83 0 0 chr13 105184840 105184949 -15099363 + L1Md_F2 LINE L1 6471 6579 -3 3 1387 230 203 27 0 chr13 105185254 105185328 -15098984 + (TA)n Simple_repeat Simple_repeat 2 77 0 3 1387 391 265 38 29 chr13 105185328 105185433 -15098879 + B1F SINE Alu 37 142 -7 3 1387 258 253 168 0 chr13 105186521 105186616 -15097696 + MER3 DNA MER1_type 23 133 -76 3 1387 741 182 0 19 chr13 105186826 105186983 -15097329 - L1Md_F3 LINE L1 -1 6583 6430 3 1387 228 246 0 0 chr13 105188281 105188342 -15095970 + A-rich Low_complexity Low_complexity 1 61 0 3 1387 225 0 0 0 chr13 105188441 105188466 -15095846 + (T)n Simple_repeat Simple_repeat 1 25 0 3 1387 29 28 0 0 chr13 105189750 105189786 -15094526 + AT_rich Low_complexity Low_complexity 1 36 0 3 1387 23 0 0 0 chr13 105189885 105189908 -15094404 + AT_rich Low_complexity Low_complexity 1 23 0 3 1387 232 388 88 31 chr13 105190366 105190560 -15093752 + L2 LINE L2 242 446 -2973 3 1387 595 263 98 12 chr13 105190562 105190868 -15093444 - ORR1E LTR MaLR 0 359 1 3 1387 204 291 233 37 chr13 105190868 105191057 -15093255 + L2 LINE L2 442 667 -2752 3 1387 710 327 126 37 chr13 105191420 105191935 -15092377 + L2 LINE L2 2175 2735 -684 3 1387 266 338 12 12 chr13 105191936 105192017 -15092295 - ID4 SINE ID -2 81 1 3 1387 443 320 187 4 chr13 105192059 105192316 -15091996 + L2 LINE L2 2764 3067 -352 3 1387 21 57 0 0 chr13 105193753 105193788 -15090524 + AT_rich Low_complexity Low_complexity 1 35 0 3 1387 435 239 125 54 chr13 105193811 105193979 -15090333 + MER3 DNA MER1_type 7 186 -23 3 1387 23 0 0 0 chr13 105194083 105194106 -15090206 + AT_rich Low_complexity Low_complexity 1 23 0 3 1387 422 257 17 26 chr13 105194135 105194251 -15090061 + MER2 DNA MER2_type 180 294 -51 3 1387 21 0 0 0 chr13 105195154 105195175 -15089137 + AT_rich Low_complexity Low_complexity 1 21 0 3 1387 564 109 11 0 chr13 105195176 105195268 -15089044 - Lx3C LINE L1 -2 6974 6882 3 1387 1884 224 108 54 chr13 105195748 105195929 -15088383 - Lx9 LINE L1 -7 7637 7418 3 1387 279 54 0 0 chr13 105195929 105195966 -15088346 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1387 1884 224 108 54 chr13 105195966 105196036 -15088276 - Lx9 LINE L1 -227 7417 7364 3 1387 1128 102 15 70 chr13 105196036 105196237 -15088075 + B2_Mm2 SINE B2 3 192 -3 3 1387 1884 224 108 54 chr13 105196237 105196578 -15087734 - Lx9 LINE L1 -281 7363 7012 3 1387 1289 163 82 0 chr13 105196579 105196824 -15087488 + Lx9 LINE L1 6745 7009 -635 3 1387 307 292 62 49 chr13 105197293 105197437 -15086875 + MIRb SINE MIR 37 182 -86 3 1387 282 219 62 0 chr13 105198208 105198272 -15086040 + RSINE1 SINE B4 66 133 -32 3 1387 246 62 0 0 chr13 105198287 105198319 -15085993 + (GGGAGA)n Simple_repeat Simple_repeat 3 34 0 3 1387 1130 229 75 19 chr13 105198359 105198563 -15085749 - ORR1D1 LTR MaLR -8 366 159 3 1387 375 23 0 0 chr13 105198563 105198607 -15085705 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1387 408 20 0 0 chr13 105198607 105198655 -15085657 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1387 1130 218 185 25 chr13 105198655 105198773 -15085539 - ORR1D1 LTR MaLR -216 158 2 3 1387 277 291 56 64 chr13 105200195 105200320 -15083992 + L2a LINE L2 3289 3412 -14 3 1387 224 343 93 0 chr13 105200403 105200511 -15083801 + L3 LINE CR1 4201 4318 -171 3 1387 26 0 0 0 chr13 105201735 105201761 -15082551 + AT_rich Low_complexity Low_complexity 1 26 0 3 1387 326 365 9 0 chr13 105201852 105201967 -15082345 + B3A SINE B2 1 116 -82 3 1387 239 203 62 0 chr13 105202107 105202171 -15082141 - RMER30 DNA MER1_type -46 156 89 3 1387 29 28 0 0 chr13 105204007 105204043 -15080269 + AT_rich Low_complexity Low_complexity 1 36 0 3 1387 276 100 0 0 chr13 105204283 105204323 -15079989 + (TTC)n Simple_repeat Simple_repeat 2 41 0 3 1387 511 228 26 9 chr13 105204350 105204465 -15079847 - RSINE1 SINE B4 -47 118 2 3 1387 453 250 8 25 chr13 105204499 105204618 -15079694 - PB1D10 SINE Alu 0 117 1 3 1387 238 296 157 11 chr13 105204839 105205030 -15079282 - L1ME2z LINE L1 -67 6377 6159 3 1387 826 283 105 10 chr13 105205182 105205478 -15078834 - MLT1A0 LTR MaLR -35 330 7 3 1387 845 270 92 37 chr13 105205487 105205999 -15078313 - L1ME2z LINE L1 -417 6027 5488 3 1387 1314 280 138 18 chr13 105206135 105206876 -15077436 - L1MA5 LINE L1 -1 7001 6172 3 1387 709 65 269 0 chr13 105206886 105206994 -15077318 + B1_Mus2 SINE Alu 3 139 -8 3 1387 519 211 58 18 chr13 105207070 105207211 -15077101 - PB1D10 SINE Alu 0 149 6 3 1387 460 296 92 13 chr13 105207331 105207716 -15076596 - L1MA5 LINE L1 -3833 3012 2590 3 1387 335 331 18 24 chr13 105207758 105207928 -15076384 - L1MEc LINE L1 -3433 2886 2718 3 1387 350 314 65 7 chr13 105208222 105208360 -15075952 - RSINE1 SINE B4 -17 148 3 3 1387 1584 286 73 65 chr13 105208394 105209365 -15074947 - L1MA9 LINE L1 -1 6311 5326 3 1387 1436 87 0 5 chr13 105209365 105209561 -15074751 - B2_Mm2 SINE B2 0 195 1 3 1387 1584 310 35 32 chr13 105209561 105210184 -15074128 - L1MA9 LINE L1 -987 5325 4690 3 1387 21 0 0 0 chr13 105210185 105210206 -15074106 + AT_rich Low_complexity Low_complexity 1 21 0 3 1387 3751 142 67 52 chr13 105210206 105210918 -15073394 - Lx4A LINE L1 0 7058 6336 3 1387 335 186 0 0 chr13 105210897 105210967 -15073345 - L1MA9 LINE L1 -1447 4696 4627 3 1387 945 261 138 11 chr13 105210969 105211403 -15072909 - L1MA9 LINE L1 -1871 4272 3784 3 1387 294 291 90 6 chr13 105211396 105211562 -15072750 - L1MA9 LINE L1 -3337 2803 2624 3 1387 7152 81 39 13 chr13 105211756 105212983 -15071329 - L1_Mus2 LINE L1 0 6566 5274 3 1387 294 292 63 80 chr13 105212983 105213264 -15071048 - RLTR9B LTR ERVK 0 437 85 3 1387 7098 137 9 5 chr13 105213353 105214516 -15069796 - L1_Mur2 LINE L1 -604 5273 4107 3 1387 4292 136 24 20 chr13 105214499 105215511 -15068801 - L1VL4 LINE L1 -2353 1206 193 3 1387 241 277 58 8 chr13 105215517 105215637 -15068675 - L1MEc LINE L1 -4628 1772 1647 3 1387 228 238 16 16 chr13 105215852 105215916 -15068396 - L1M3de LINE L1 -4534 2119 2056 3 1387 343 339 89 0 chr13 105216140 105216252 -15068060 + RSINE1 SINE B4 38 159 -6 3 1387 21 0 0 0 chr13 105216466 105216487 -15067825 + AT_rich Low_complexity Low_complexity 1 21 0 3 1387 50 51 0 0 chr13 105217360 105217438 -15066874 + AT_rich Low_complexity Low_complexity 1 78 0 3 1387 297 0 0 0 chr13 105217906 105217939 -15066373 + (TG)n Simple_repeat Simple_repeat 2 34 0 3 1387 220 0 0 0 chr13 105218727 105218756 -15065556 + B3A SINE B2 2 30 -168 3 1387 293 274 49 49 chr13 105219560 105219576 -15064736 + RLTR25B LTR ERVK 427 492 -536 4 1387 452 242 21 10 chr13 105219576 105219672 -15064640 + B1_Mur1 SINE Alu 43 139 -10 4 1387 293 274 49 49 chr13 105219672 105219683 -15064629 + RLTR25B LTR ERVK 493 549 -479 4 1387 24 0 0 0 chr13 105220166 105220190 -15064122 + AT_rich Low_complexity Low_complexity 1 24 0 4 1387 40 49 0 0 chr13 105220366 105220427 -15063885 + AT_rich Low_complexity Low_complexity 1 61 0 4 1387 230 169 15 0 chr13 105220477 105220542 -15063770 + (TG)n Simple_repeat Simple_repeat 2 67 0 4 1387 895 304 15 15 chr13 105220571 105220845 -15063467 - B4 SINE B4 -18 274 1 4 1387 215 146 18 35 chr13 105220892 105220949 -15063363 + (TTTG)n Simple_repeat Simple_repeat 4 59 0 4 1387 198 0 0 0 chr13 105220955 105220977 -15063335 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1387 600 223 22 18 chr13 105221605 105221754 -15062558 + ID_B1 SINE B4 91 246 -46 4 1387 714 295 25 11 chr13 105221796 105222077 -15062235 + L1MB1 LINE L1 5543 5827 -362 4 1387 810 274 5 31 chr13 105222077 105222269 -15062043 + B3A SINE B2 8 194 -4 4 1387 578 264 139 20 chr13 105222290 105222591 -15061721 + Lx9 LINE L1 7265 7601 -43 4 1387 483 265 163 49 chr13 105222639 105222902 -15061410 + L1MA9 LINE L1 5816 6105 -207 4 1387 1273 239 114 74 chr13 105222902 105223453 -15060859 - RMER15 LTR ERVL 0 575 3 4 1387 483 265 163 49 chr13 105223453 105223514 -15060798 + L1MA9 LINE L1 6106 6177 -135 4 1387 711 211 49 14 chr13 105223713 105223857 -15060455 - B1_Mur2 SINE Alu 0 149 1 4 1387 378 273 40 10 chr13 105223936 105224036 -15060276 - B1F SINE Alu -1 148 46 4 1387 203 175 0 0 chr13 105224075 105224115 -15060197 + T-rich Low_complexity Low_complexity 1 40 0 4 1387 315 225 0 14 chr13 105224125 105224197 -15060115 + MER33 DNA MER1_type 7 77 -247 4 1387 261 331 82 8 chr13 105224659 105224781 -15059531 - L1MEc LINE L1 -1254 5065 4935 4 1387 23 54 0 0 chr13 105224877 105224914 -15059398 + AT_rich Low_complexity Low_complexity 1 37 0 4 1387 266 247 25 38 chr13 105225021 105225053 -15059259 - ID SINE ID -140 84 6 4 1387 288 188 0 0 chr13 105225053 105225101 -15059211 - ID4_ SINE ID -30 53 6 4 1387 207 269 12 49 chr13 105225143 105225239 -15059073 + T-rich Low_complexity Low_complexity 72 163 0 4 1387 494 303 53 21 chr13 105225239 105225428 -15058884 - B3A SINE B2 -2 196 2 4 1387 207 269 12 49 chr13 105225428 105225495 -15058817 + T-rich Low_complexity Low_complexity 7 71 0 4 1387 269 151 19 0 chr13 105225523 105225576 -15058736 + T-rich Low_complexity Low_complexity 3 56 0 4 1387 1244 105 89 23 chr13 105225642 105225856 -15058456 - Lx2 LINE L1 0 6997 6770 4 1387 18655 134 7 6 chr13 105225856 105229667 -15054645 - Lx2 LINE L1 -366 6631 2819 4 1387 789 79 0 0 chr13 105229943 105230057 -15054255 + (TC)n Simple_repeat Simple_repeat 1 114 0 4 1387 261 0 0 0 chr13 105230057 105230085 -15054227 + (CA)n Simple_repeat Simple_repeat 1 29 0 4 1387 376 262 77 45 chr13 105230096 105230252 -15054060 + RSINE1 SINE B4 4 164 -1 4 1387 443 278 51 29 chr13 105230377 105230514 -15053798 - MER58A DNA MER1_type -10 214 75 4 1387 588 299 48 93 chr13 105230516 105230955 -15053357 - L1MEc LINE L1 -4048 2352 1934 4 1387 24 32 0 0 chr13 105231017 105231048 -15053264 + AT_rich Low_complexity Low_complexity 1 31 0 4 1387 3185 62 12 0 chr13 105231215 105231635 -15052677 - L1_Mus1 LINE L1 -2 6565 6141 4 1387 21 57 0 0 chr13 105231705 105231740 -15052572 + AT_rich Low_complexity Low_complexity 1 35 0 4 1387 220 271 0 0 chr13 105232266 105232325 -15051987 + GA-rich Low_complexity Low_complexity 2 60 0 4 1387 259 138 0 49 chr13 105232514 105232575 -15051737 + G-rich Low_complexity Low_complexity 5 62 0 4 1387 232 354 141 44 chr13 105233110 105233471 -15050841 - Lx8 LINE L1 -1 7472 7077 4 1387 257 318 35 12 chr13 105233511 105233597 -15050715 + PB1D10 SINE Alu 21 108 -9 4 1387 191 337 12 24 chr13 105234340 105234425 -15049887 - MIRc SINE MIR -90 178 95 4 1387 682 281 7 0 chr13 105234525 105234671 -15049641 + RSINE1 SINE B4 18 164 -1 4 1387 226 213 0 0 chr13 105235402 105235449 -15048863 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1387 402 314 81 6 chr13 105237257 105237430 -15046882 + MER5A DNA MER1_type 4 189 0 4 1387 1123 206 84 122 chr13 105237624 105238016 -15046296 - MTE2a LTR MaLR 0 379 3 4 1387 240 351 26 13 chr13 105239759 105239837 -15044475 + MER5B DNA MER1_type 100 178 0 4 1387 234 191 0 0 chr13 105241167 105241214 -15043098 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1387 438 20 0 0 chr13 105241214 105241265 -15043047 + (GA)n Simple_repeat Simple_repeat 1 51 0 4 1387 357 292 70 9 chr13 105241912 105242026 -15042286 + B1F SINE Alu 1 121 -28 4 1387 292 338 50 29 chr13 105242026 105242052 -15042260 + ID_B1 SINE B4 82 224 0 4 1387 251 179 0 35 chr13 105242396 105242454 -15041858 + (TCTCTG)n Simple_repeat Simple_repeat 2 57 0 4 1387 372 222 27 27 chr13 105242454 105242528 -15041784 - ID SINE ID -149 75 2 4 1387 646 183 122 0 chr13 105243214 105243345 -15040967 - B1_Mur2 SINE Alu -1 148 2 4 1387 180 0 0 0 chr13 105243651 105243671 -15040641 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 4 1387 1123 94 0 12 chr13 105244562 105244735 -15039577 + (TCTCC)n Simple_repeat Simple_repeat 3 173 0 4 1387 268 336 13 0 chr13 105244735 105244827 -15039485 - ID4_ SINE ID -56 96 4 4 1387 895 144 90 0 chr13 105245863 105246030 -15038282 - ORR1A2 LTR MaLR -52 275 94 4 1387 1952 262 39 59 chr13 105246073 105246148 -15038164 + L1_Rod LINE L1 3798 3869 -1978 4 1387 1393 70 5 5 chr13 105246148 105246334 -15037978 - B2_Mm1t SINE B2 -7 186 1 4 1387 1952 262 39 59 chr13 105246334 105246359 -15037953 + L1_Rod LINE L1 3870 3885 -1962 4 1387 1230 30 12 18 chr13 105246359 105246527 -15037785 + (GGAA)n Simple_repeat Simple_repeat 2 168 0 4 1387 1952 262 39 59 chr13 105246527 105247270 -15037042 + L1_Rod LINE L1 3886 4625 -1222 4 1387 6435 81 40 63 chr13 105247368 105248137 -15036175 - L1VL2 LINE L1 -1586 2029 1243 4 1387 252 244 36 24 chr13 105248137 105248221 -15036091 - B1_Mus2 SINE Alu 0 147 63 4 1387 6435 81 40 63 chr13 105248221 105249321 -15034991 - L1VL2 LINE L1 -1586 1242 114 4 1388 324 0 0 0 chr13 105251483 105251519 -15032793 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1388 228 45 65 22 chr13 105252859 105252905 -15031407 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 4 1388 748 176 7 40 chr13 105252915 105253063 -15031249 - B1_Mus1 SINE Alu 0 148 6 4 1388 385 314 55 55 chr13 105253063 105253116 -15031196 - ID_B1 SINE B4 0 223 23 4 1388 910 134 205 16 chr13 105253128 105253318 -15030994 - URR1A DNA MER1_type 0 226 1 4 1388 6956 70 42 3 chr13 105254769 105255733 -15028579 - Lx3_Mus LINE L1 -12 6997 5996 4 1388 285 299 13 13 chr13 105256066 105256144 -15028168 - ID4 SINE ID 0 83 6 4 1388 287 327 9 36 chr13 105256164 105256275 -15028037 - PB1 SINE Alu -2 125 18 4 1388 247 280 26 13 chr13 105256433 105256509 -15027803 - MIR3 SINE MIR -5 203 127 4 1388 783 95 159 0 chr13 105256934 105257060 -15027252 + B1_Mus1 SINE Alu 2 147 -1 4 1388 290 45 0 22 chr13 105257065 105257110 -15027202 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1388 583 222 8 8 chr13 105257493 105257611 -15026701 + PB1D9 SINE Alu 2 119 -1 4 1388 21 0 0 0 chr13 105258082 105258103 -15026209 + AT_rich Low_complexity Low_complexity 1 21 0 4 1388 229 273 234 26 chr13 105258103 105258257 -15026055 - AmnSINE1 SINE SINE -384 191 6 4 1388 198 0 0 0 chr13 105259064 105259086 -15025226 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 4 1388 624 62 0 0 chr13 105259595 105259676 -15024636 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 1388 373 318 36 43 chr13 105259939 105260077 -15024235 + MER63B DNA AcHobo 292 428 -8 4 1388 986 161 83 55 chr13 105261096 105261313 -15022999 - URR1B DNA MER1_type -2 223 1 4 1388 413 261 16 108 chr13 105261608 105261737 -15022575 + PB1D9 SINE Alu 1 117 -3 4 1388 3010 156 56 18 chr13 105262695 105262793 -15021519 - RLTR20B3 LTR ERVK 0 577 470 4 1388 180 0 0 0 chr13 105262793 105262813 -15021499 + (CA)n Simple_repeat Simple_repeat 2 21 0 4 1388 3010 156 56 18 chr13 105262813 105263154 -15021158 - RLTR20B3 LTR ERVK -108 469 116 4 1388 1609 112 32 0 chr13 105263154 105263405 -15020907 + L1_Mus4 LINE L1 6370 6628 -8 4 1388 3010 156 56 18 chr13 105263405 105263520 -15020792 - RLTR20B3 LTR ERVK -462 115 2 4 1388 368 266 107 27 chr13 105263826 105263938 -15020374 + B1F SINE Alu 20 140 -9 4 1388 21 36 0 0 chr13 105264902 105264930 -15019382 + AT_rich Low_complexity Low_complexity 1 28 0 4 1388 814 187 203 0 chr13 105265825 105266012 -15018300 - URR1B DNA MER1_type 0 225 1 4 1388 247 278 71 91 chr13 105267161 105267260 -15017052 - PB1D10 SINE Alu -42 107 11 4 1388 414 339 0 0 chr13 105268125 105268240 -15016072 + PB1D10 SINE Alu 1 115 -2 4 1388 1024 297 62 4 chr13 105268264 105268538 -15015774 + B4A SINE B4 3 292 0 4 1388 279 0 0 0 chr13 105269087 105269118 -15015194 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1388 551 325 6 30 chr13 105269121 105269286 -15015026 - RSINE1 SINE B4 -4 161 1 4 1388 551 233 120 0 chr13 105270077 105270210 -15014102 + B1_Mur2 SINE Alu 1 149 0 4 1388 267 152 0 0 chr13 105271333 105271379 -15012933 + (TA)n Simple_repeat Simple_repeat 1 46 0 4 1388 234 286 24 83 chr13 105271567 105271651 -15012661 - MIRb SINE MIR -158 110 32 4 1388 344 273 18 35 chr13 105271682 105271796 -15012516 - PB1D10 SINE Alu -5 112 1 4 1388 207 0 0 0 chr13 105271796 105271819 -15012493 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1388 22 0 0 0 chr13 105272386 105272408 -15011904 + AT_rich Low_complexity Low_complexity 1 22 0 4 1388 256 236 217 0 chr13 105272408 105272514 -15011798 - L1ME2z LINE L1 -25 6419 6291 4 1388 249 302 98 47 chr13 105272545 105272760 -15011552 - Lx8 LINE L1 -3 7470 7245 4 1388 8854 184 152 0 chr13 105276667 105278544 -15005768 + Lx7 LINE L1 3419 5581 -299 4 1388 8707 28 0 0 chr13 105278544 105279540 -15004772 + L1Md_T LINE L1 5587 6582 0 4 1388 349 179 73 3 chr13 105280050 105280137 -15004175 - L1_Rod LINE L1 -668 5623 5483 4 1388 546 268 73 7 chr13 105280133 105280420 -15003892 + Lx7 LINE L1 5591 5911 -1785 4 1388 193 391 101 5 chr13 105281147 105281355 -15002957 + MIRb SINE MIR 26 253 -15 5 1388 195 129 0 0 chr13 105284882 105284913 -14999399 + (TG)n Simple_repeat Simple_repeat 1 31 0 5 1388 293 289 155 0 chr13 105287413 105287510 -14996802 + PB1D10 SINE Alu 2 113 -4 5 1388 1660 142 67 16 chr13 105288135 105288450 -14995862 - RMER1B Other Other -9 1057 727 5 1388 378 204 252 0 chr13 105288446 105288549 -14995763 + RMER1B Other Other 385 513 -553 5 1388 189 0 0 0 chr13 105289460 105289481 -14994831 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1388 427 270 126 0 chr13 105290537 105290648 -14993664 + RSINE1 SINE B4 9 133 -32 5 1388 324 0 0 0 chr13 105290648 105290684 -14993628 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1388 208 147 0 0 chr13 105291656 105291690 -14992622 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1388 1463 28 0 11 chr13 105291884 105292065 -14992247 - L1Md_F3 LINE L1 -14 6570 6392 5 1388 657 0 0 0 chr13 105292065 105292135 -14992177 + L1Md_F3 LINE L1 6338 6407 -177 5 1388 408 63 0 31 chr13 105292241 105292306 -14992006 + B1_Mus2 SINE Alu 84 146 -1 5 1388 393 145 0 0 chr13 105292307 105292336 -14991976 + (A)n Simple_repeat Simple_repeat 1 29 0 5 1388 1549 37 26 0 chr13 105292336 105292525 -14991787 + B2_Mm2 SINE B2 1 194 -1 5 1388 393 145 0 0 chr13 105292525 105292564 -14991748 + (A)n Simple_repeat Simple_repeat 1 39 0 5 1388 479 279 0 0 chr13 105293316 105293420 -14990892 - B3A SINE B2 -93 105 2 5 1388 442 223 198 0 chr13 105293451 105293572 -14990740 + B1F1 SINE Alu 5 149 0 5 1388 2690 123 67 9 chr13 105294175 105294430 -14989882 - RMER6B LTR ERVK 0 461 202 5 1388 198 0 0 0 chr13 105294430 105294452 -14989860 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 1388 2690 123 67 9 chr13 105294452 105294632 -14989680 - RMER6B LTR ERVK -260 201 1 5 1388 223 159 118 73 chr13 105295049 105295117 -14989195 + PB1D10 SINE Alu 27 97 -20 5 1388 3550 169 177 14 chr13 105295732 105296471 -14987841 + RMER13A LTR ERVK 1 860 0 5 1388 502 312 123 43 chr13 105298058 105298480 -14985832 + L1MB2 LINE L1 5663 6118 -53 5 1388 378 61 0 0 chr13 105298574 105298623 -14985689 + (GGGA)n Simple_repeat Simple_repeat 3 51 0 5 1388 319 211 104 13 chr13 105298639 105298716 -14985596 + PB1D10 SINE Alu 26 109 -8 5 1388 904 159 0 7 chr13 105298831 105298970 -14985342 + B1_Mur3 SINE Alu 1 138 -11 5 1388 2789 72 5 0 chr13 105298970 105299357 -14984955 - MTB LTR MaLR -11 389 1 5 1388 671 107 138 6 chr13 105299357 105299517 -14984795 - MTB-int LTR MaLR 0 1098 918 5 1388 441 0 0 0 chr13 105300720 105300769 -14983543 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1388 920 121 0 0 chr13 105301350 105301490 -14982822 - B1_Mur3 SINE Alu -1 148 9 5 1388 241 254 0 33 chr13 105301533 105301594 -14982718 + C-rich Low_complexity Low_complexity 3 61 0 5 1388 312 203 39 51 chr13 105301594 105301672 -14982640 - ID4 SINE ID -6 77 1 5 1388 324 231 0 0 chr13 105302363 105302428 -14981884 + ID4_ SINE ID 3 67 -16 5 1388 303 297 41 112 chr13 105302642 105303002 -14981310 - MTEb LTR MaLR -5 374 31 5 1388 1252 157 71 9 chr13 105303193 105303405 -14980907 - URR1B DNA MER1_type 0 225 1 5 1388 1448 208 131 3 chr13 105303472 105303809 -14980503 - MTD LTR MaLR -36 383 4 5 1388 363 259 101 34 chr13 105305065 105305213 -14979099 + MLT1A0 LTR MaLR 3 160 -205 5 1388 183 42 0 0 chr13 105306550 105306574 -14977738 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5 1388 21 0 0 0 chr13 105306809 105306830 -14977482 + AT_rich Low_complexity Low_complexity 1 21 0 5 1388 1130 111 54 22 chr13 105307810 105307995 -14976317 + B2_Mm2 SINE B2 2 192 -3 5 1388 403 198 12 12 chr13 105309418 105309500 -14974812 + RMER17C LTR ERVK 2 83 -327 5 1388 493 330 68 5 chr13 105309497 105309689 -14974623 - MER21B LTR ERV1 -606 257 54 5 1388 2802 103 53 17 chr13 105310310 105310724 -14973588 + RLTR23 LTR ERV1 1 429 -1 5 1388 1499 253 3 19 chr13 105311025 105311391 -14972921 - MTE2b LTR MaLR -12 367 8 5 1388 645 255 82 31 chr13 105312214 105312408 -14971904 + ID_B1 SINE B4 3 206 -18 5 1388 1404 119 15 106 chr13 105312433 105312706 -14971606 + ORR1B1 LTR MaLR 147 394 0 5 1388 192 152 0 0 chr13 105312706 105312739 -14971573 + (TA)n Simple_repeat Simple_repeat 2 34 0 5 1388 998 291 75 3 chr13 105312739 105313059 -14971253 - MLT1A0 LTR MaLR -22 343 1 5 1388 379 301 96 15 chr13 105313104 105313239 -14971073 + HERV16-int LTR ERVL 2089 2234 -2762 5 1388 293 346 105 16 chr13 105313314 105313505 -14970807 + HERV16-int LTR ERVL 2398 2605 -3152 5 1388 542 197 35 37 chr13 105313780 105313948 -14970364 - ORR1B1 LTR MaLR -193 185 19 5 1388 24 32 0 0 chr13 105313965 105313996 -14970316 + AT_rich Low_complexity Low_complexity 1 31 0 5 1388 234 0 0 0 chr13 105314129 105314155 -14970157 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 5 1388 352 288 64 0 chr13 105314282 105314407 -14969905 - Lx7 LINE L1 -375 7321 7189 5 1388 1248 86 0 0 chr13 105314462 105314637 -14969675 + (TTTC)n Simple_repeat Simple_repeat 1 175 0 5 1388 1306 255 46 3 chr13 105314647 105314930 -14969382 - Lx6 LINE L1 -169 7291 6997 5 1388 772 201 0 27 chr13 105314928 105315076 -14969236 + Lx7 LINE L1 6151 6294 -1402 5 1388 576 257 145 15 chr13 105315441 105315710 -14968602 + MLT2D LTR ERVL 10 313 -101 5 1388 838 271 83 40 chr13 105316080 105316270 -14968042 - MLT1A0 LTR MaLR 0 365 159 5 1388 2262 137 16 30 chr13 105316270 105316640 -14967672 - ORR1B2 LTR MaLR -2 365 1 5 1388 838 271 83 40 chr13 105316640 105316775 -14967537 - MLT1A0 LTR MaLR -207 158 26 5 1388 332 272 79 29 chr13 105316777 105316917 -14967395 - RMER15 LTR ERVL -4 571 425 5 1388 960 111 105 0 chr13 105317285 105317457 -14966855 + URR1A DNA MER1_type 37 226 0 5 1388 417 255 81 88 chr13 105317457 105317582 -14966730 - CYRA11_Mm Unknown Y-chromosome -431 186 64 5 1388 315 342 62 52 chr13 105317902 105318112 -14966200 - HERV16-int LTR ERVL -4289 707 496 5 1388 328 370 45 10 chr13 105318557 105318756 -14965556 - LTR16A LTR ERVL -68 383 178 5 1388 271 220 10 52 chr13 105318991 105319087 -14965225 + (TA)n Simple_repeat Simple_repeat 2 93 0 5 1388 384 119 0 0 chr13 105319176 105319235 -14965077 + (TA)n Simple_repeat Simple_repeat 2 60 0 5 1388 252 0 0 0 chr13 105319238 105319266 -14965046 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1388 773 290 77 18 chr13 105319739 105320196 -14964116 + L1M5 LINE L1 3673 4156 -1990 5 1388 2231 199 68 36 chr13 105320204 105320793 -14963519 + Lx9 LINE L1 7030 7637 -7 5 1388 334 293 139 24 chr13 105320831 105321254 -14963058 + L1M5 LINE L1 4151 4622 -1524 5 1388 249 330 47 26 chr13 105321440 105321673 -14962639 + L1MEe LINE L1 810 1047 -3807 5 1388 3261 149 29 19 chr13 105321890 105322479 -14961833 - RLTR17 LTR ERVK 0 692 98 5 1388 25 31 0 0 chr13 105322740 105322772 -14961540 + AT_rich Low_complexity Low_complexity 1 32 0 5 1388 533 302 78 5 chr13 105322877 105323070 -14961242 - L3 LINE CR1 -2254 2235 2029 5 1388 879 226 5 91 chr13 105323424 105323633 -14960679 - B3A SINE B2 -6 192 2 5 1388 216 0 0 0 chr13 105323737 105323761 -14960551 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 5 1388 192 132 79 0 chr13 105323804 105323842 -14960470 + MIR SINE MIR 101 141 -121 5 1388 29 28 0 0 chr13 105323847 105323883 -14960429 + AT_rich Low_complexity Low_complexity 1 36 0 5 1388 1138 303 127 58 chr13 105324990 105326099 -14958213 + L1M4 LINE L1 7 1192 -5350 5 1388 452 267 15 73 chr13 105326159 105326327 -14957985 - B4A SINE B4 0 292 132 5 1388 543 31 0 0 chr13 105326339 105326404 -14957908 + (TG)n Simple_repeat Simple_repeat 2 66 0 5 1388 266 290 97 29 chr13 105326770 105326873 -14957439 + ID_B1 SINE B4 91 200 -24 5 1388 258 267 124 41 chr13 105326873 105326891 -14957421 + B1F SINE Alu 10 140 -9 5 1388 795 131 93 6 chr13 105326892 105327053 -14957259 - L1_Rod LINE L1 -3608 2239 2065 5 1388 425 291 140 21 chr13 105327129 105327164 -14957148 - B3 SINE B2 -4 212 171 5 1388 616 64 21 0 chr13 105327164 105327258 -14957054 + (TAGA)n Simple_repeat Simple_repeat 1 96 0 5 1388 425 291 140 21 chr13 105327258 105327408 -14956904 - B3 SINE B2 -46 170 5 5 1388 544 257 37 0 chr13 105327490 105327626 -14956686 + ID_B1 SINE B4 81 221 -3 5 1388 288 323 114 12 chr13 105327634 105327888 -14956424 + L1M4 LINE L1 4891 5170 -1468 5 1388 393 22 0 0 chr13 105327902 105327948 -14956364 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1388 624 137 0 0 chr13 105327952 105328054 -14956258 + (GA)n Simple_repeat Simple_repeat 1 102 0 5 1388 546 235 0 0 chr13 105328062 105328160 -14956152 - B1_Mur3 SINE Alu -51 98 1 5 1388 775 328 47 36 chr13 105328184 105328627 -14955685 + L1M4 LINE L1 5222 5669 -975 5 1388 1263 76 52 0 chr13 105328808 105328980 -14955332 + B2_Mm2 SINE B2 1 181 -14 5 1388 413 95 14 0 chr13 105329007 105329072 -14955240 + B2_Mm2 SINE B2 46 116 -82 5 1388 225 0 0 0 chr13 105329087 105329112 -14955200 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 5 1388 460 275 35 40 chr13 105329126 105329327 -14954985 + L1M4 LINE L1 5883 6082 -590 5 1388 589 288 8 84 chr13 105329391 105329444 -14954868 - MT2A LTR ERVL -242 291 243 5 1388 2351 123 0 0 chr13 105329444 105329770 -14954542 - ORR1A2 LTR MaLR -1 326 1 5 1388 589 288 8 84 chr13 105329770 105329955 -14954357 - MT2A LTR ERVL -291 242 71 5 1388 1486 57 15 35 chr13 105329955 105330154 -14954158 + B2_Mm2 SINE B2 1 195 0 5 1388 318 250 0 43 chr13 105330181 105330273 -14954039 - MT2A LTR ERVL -443 90 3 5 1388 212 332 6 3 chr13 105330923 105331037 -14953275 - L3b LINE CR1 -362 4127 4013 5 1388 698 114 18 0 chr13 105331696 105331810 -14952502 + (CACG)n Simple_repeat Simple_repeat 2 117 0 5 1388 449 211 105 8 chr13 105331954 105332078 -14952234 + B3 SINE B2 81 216 0 5 1388 354 205 0 0 chr13 105332475 105332553 -14951759 + GA-rich Low_complexity Low_complexity 2 79 0 5 1388 213 214 43 14 chr13 105334081 105334186 -14950126 + MIRb SINE MIR 131 246 -22 5 1388 419 324 46 23 chr13 105334699 105334917 -14949395 - L1M5 LINE L1 -339 5785 5563 5 1388 2307 138 62 8 chr13 105334918 105335292 -14949020 + ORR1B1 LTR MaLR 1 394 0 5 1388 777 182 39 0 chr13 105335292 105335473 -14948839 + Lx9 LINE L1 7456 7643 -1 5 1388 1081 174 43 0 chr13 105335756 105335963 -14948349 + B3 SINE B2 1 216 0 6 1388 210 222 54 36 chr13 105336668 105336724 -14947588 - B1F SINE Alu -63 86 30 6 1388 2463 98 3 0 chr13 105336853 105337178 -14947134 - ORR1A2 LTR MaLR 0 327 2 6 1388 624 27 0 0 chr13 105337219 105337293 -14947019 + (TC)n Simple_repeat Simple_repeat 1 74 0 6 1388 279 0 0 0 chr13 105337293 105337323 -14946989 + (CA)n Simple_repeat Simple_repeat 1 31 0 6 1388 324 0 0 0 chr13 105337646 105337682 -14946630 + (TAA)n Simple_repeat Simple_repeat 2 37 0 6 1388 245 296 77 54 chr13 105337896 105338084 -14946228 - L1ME3 LINE L1 -35 6138 5935 6 1388 1145 55 0 27 chr13 105338099 105338235 -14946077 + B1_Mm SINE Alu 2 136 -11 6 1388 252 0 0 0 chr13 105338235 105338263 -14946049 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 6 1388 1145 55 0 27 chr13 105338263 105338276 -14946036 + B1_Mm SINE Alu 137 147 0 6 1388 226 244 0 34 chr13 105338311 105338400 -14945912 + CT-rich Low_complexity Low_complexity 2 87 0 6 1388 410 241 26 18 chr13 105339385 105339499 -14944813 - RLTR42-int LTR ERVK -1897 4240 4126 6 1388 303 167 0 0 chr13 105339556 105339604 -14944708 - RLTR42-int LTR ERVK -2028 4109 4062 6 1388 413 202 78 136 chr13 105339812 105340018 -14944294 - RLTR42-int LTR ERVK -2186 3951 3758 6 1388 291 157 0 0 chr13 105340516 105340567 -14943745 + (CATA)n Simple_repeat Simple_repeat 3 53 0 6 1388 1501 54 5 0 chr13 105340584 105340769 -14943543 - B2_Mm1t SINE B2 -6 187 2 6 1388 267 253 43 61 chr13 105340883 105341047 -14943265 - RLTR42-int LTR ERVK -2564 3573 3413 6 1388 1226 257 82 85 chr13 105341527 105342400 -14941912 - RLTR42-int LTR ERVK -3163 2974 1870 6 1388 334 178 27 14 chr13 105342673 105342747 -14941565 - RLTR42-int LTR ERVK -3917 1605 1531 6 1388 322 164 16 132 chr13 105342773 105342954 -14941358 - RLTR42-int LTR ERVK -3971 1551 1409 6 1388 618 211 144 16 chr13 105342974 105343162 -14941150 - RLTR42-int LTR ERVK -4055 1467 1256 6 1388 350 206 117 10 chr13 105343162 105343265 -14941047 - Lx5 LINE L1 -8 7042 6929 6 1388 752 217 38 6 chr13 105343265 105343423 -14940889 - RLTR42-int LTR ERVK -4255 1267 1105 6 1388 978 93 0 0 chr13 105345854 105345993 -14938319 + (TCTA)n Simple_repeat Simple_repeat 4 142 0 6 1388 1085 86 0 0 chr13 105345993 105346145 -14938167 - B2_Mm2 SINE B2 -40 155 4 6 1388 739 220 171 62 chr13 105346591 105346960 -14937352 - RLTR9E LTR ERVK 0 409 1 6 1388 210 286 26 13 chr13 105347173 105347251 -14937061 + MIR SINE MIR 160 238 -24 6 1388 747 186 4 9 chr13 105347296 105347437 -14936875 - B1_Mur1 SINE Alu -3 146 3 6 1388 1640 133 63 67 chr13 105347446 105347745 -14936567 - Lx4A LINE L1 -1 7057 6760 6 1388 1189 54 7 0 chr13 105348729 105348876 -14935436 - B1_Mus1 SINE Alu 0 148 1 6 1388 573 248 178 55 chr13 105349239 105349714 -14934598 + RLTR11B LTR ERVK 1 562 -6 6 1388 339 25 0 0 chr13 105350266 105350306 -14934006 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1388 220 200 0 0 chr13 105351694 105351744 -14932568 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1388 183 42 0 0 chr13 105351851 105351875 -14932437 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1388 220 191 24 0 chr13 105352017 105352059 -14932253 - ID2 SINE ID -35 48 6 6 1388 945 165 0 0 chr13 105352109 105352353 -14931959 + GA-rich Low_complexity Low_complexity 1 244 0 6 1388 1089 90 0 33 chr13 105352353 105352537 -14931775 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 6 1388 308 33 31 47 chr13 105353745 105353809 -14930503 + (CAAAAA)n Simple_repeat Simple_repeat 2 64 0 6 1388 1448 109 103 53 chr13 105354969 105355250 -14929062 - Lx LINE L1 0 6654 6360 6 1388 253 150 48 48 chr13 105355691 105355754 -14928558 + RLTR11A LTR ERVK 17 79 -449 6 1388 1145 187 47 60 chr13 105355795 105356096 -14928216 + RLTR11A LTR ERVK 228 524 -4 6 1388 531 268 20 27 chr13 105356766 105356912 -14927400 + RSINE1 SINE B4 4 148 -17 6 1388 389 70 18 0 chr13 105357021 105357078 -14927234 + (TA)n Simple_repeat Simple_repeat 1 58 0 6 1388 1943 200 13 62 chr13 105357686 105358151 -14926161 - RMER10A LTR ERVL 0 442 1 6 1388 383 224 70 20 chr13 105358917 105359017 -14925295 + B1_Mus1 SINE Alu 1 105 -43 6 1388 423 0 0 0 chr13 105360147 105360194 -14924118 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1388 279 0 0 0 chr13 105360316 105360347 -14923965 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 6 1388 659 263 151 0 chr13 105361536 105361715 -14922597 - B3 SINE B2 -9 207 2 6 1388 455 303 13 44 chr13 105362032 105362191 -14922121 + RSINE1 SINE B4 2 155 -10 6 1388 925 17 25 0 chr13 105363150 105363268 -14921044 + (TTCTC)n Simple_repeat Simple_repeat 2 122 0 6 1388 631 131 36 0 chr13 105363422 105363559 -14920753 + GA-rich Low_complexity Low_complexity 1 142 0 6 1388 618 287 38 0 chr13 105364005 105364162 -14920150 - RSINE1 SINE B4 -1 164 2 6 1388 290 290 17 78 chr13 105364162 105364262 -14920050 + MLT1G LTR MaLR 198 290 -301 6 1388 210 292 46 0 chr13 105364328 105364393 -14919919 + ID2 SINE ID 2 69 -14 6 1388 236 281 30 20 chr13 105364472 105364575 -14919737 + MLT1G LTR MaLR 489 595 0 6 1388 265 288 124 9 chr13 105364622 105364727 -14919585 - PB1D10 SINE Alu 0 117 1 6 1388 556 278 114 1 chr13 105365479 105365737 -14918575 + MER44A DNA MER2_type 45 337 -2 6 1388 1013 83 7 0 chr13 105366160 105366305 -14918007 + (TTTC)n Simple_repeat Simple_repeat 2 147 0 6 1388 24 0 0 0 chr13 105366305 105366329 -14917983 + AT_rich Low_complexity Low_complexity 1 24 0 6 1388 210 338 82 54 chr13 105366886 105367033 -14917279 + MIRb SINE MIR 37 187 -81 6 1388 1185 43 0 0 chr13 105367588 105367728 -14916584 + B1_Mus2 SINE Alu 2 141 -6 6 1388 639 0 0 0 chr13 105367729 105367800 -14916512 + (GAA)n Simple_repeat Simple_repeat 1 71 0 6 1388 227 54 27 0 chr13 105367868 105367905 -14916407 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1388 232 219 0 0 chr13 105368752 105368793 -14915519 - L5 LINE RTE -230 2035 1995 6 1388 2957 44 42 61 chr13 105369243 105369300 -14915012 - MTB LTR MaLR 0 400 353 6 1388 1123 43 29 0 chr13 105369300 105369440 -14914872 + B1_Mus2 SINE Alu 2 145 -2 6 1388 2957 44 42 61 chr13 105369440 105369790 -14914522 - MTB LTR MaLR -48 352 1 6 1388 330 313 20 10 chr13 105370282 105370382 -14913930 + RSINE1 SINE B4 16 116 -49 6 1388 236 297 27 13 chr13 105370508 105370583 -14913729 + ID4_ SINE ID 4 79 -4 6 1388 402 267 59 0 chr13 105370636 105370737 -14913575 + PB1D10 SINE Alu 4 110 -7 6 1388 343 180 0 0 chr13 105371380 105371441 -14912871 + B1F1 SINE Alu 1 61 -88 6 1388 234 61 0 58 chr13 105371976 105372028 -14912284 + (CATA)n Simple_repeat Simple_repeat 2 50 0 6 1388 445 308 13 33 chr13 105372187 105372338 -14911974 + RSINE1 SINE B4 3 150 -15 6 1388 355 301 26 17 chr13 105372452 105372567 -14911745 + PB1D10 SINE Alu 2 117 0 6 1388 217 297 81 0 chr13 105373212 105373286 -14911026 - B1F SINE Alu -69 80 1 6 1388 24 77 0 0 chr13 105373486 105373538 -14910774 + AT_rich Low_complexity Low_complexity 1 52 0 6 1388 1042 224 114 54 chr13 105373580 105373985 -14910327 - Lx9 LINE L1 -1 7643 7215 6 1388 201 271 0 0 chr13 105375780 105375828 -14908484 - L2a LINE L2 -3 3423 3376 6 1388 216 0 0 0 chr13 105376403 105376427 -14907885 + (TG)n Simple_repeat Simple_repeat 2 25 0 6 1388 675 345 103 18 chr13 105376898 105377353 -14906959 - L2a LINE L2 -573 2846 2353 6 1388 180 0 0 0 chr13 105377450 105377470 -14906842 + (TGG)n Simple_repeat Simple_repeat 2 21 0 6 1388 698 77 96 0 chr13 105377478 105377582 -14906730 + B1_Mur3 SINE Alu 15 128 -21 6 1388 425 287 8 32 chr13 105377588 105377714 -14906598 - L1MC4a LINE L1 -316 7566 7444 6 1388 884 287 97 21 chr13 105377868 105378291 -14906021 + L1MC4a LINE L1 7428 7882 0 6 1388 420 20 0 0 chr13 105379143 105379192 -14905120 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1388 282 286 83 64 chr13 105379356 105379489 -14904823 - ORR1E LTR MaLR -182 177 46 6 1388 655 144 45 0 chr13 105379489 105379621 -14904691 - Lx9 LINE L1 -1 7643 7506 6 1388 282 286 83 64 chr13 105379621 105379644 -14904668 - ORR1E LTR MaLR -314 45 18 6 1388 266 299 75 38 chr13 105379900 105380060 -14904252 - MIRb SINE MIR -48 220 55 6 1388 23 54 0 0 chr13 105381411 105381448 -14902864 + AT_rich Low_complexity Low_complexity 1 37 0 6 173 435 224 37 0 chr13 105381796 105381903 -14902409 - B3 SINE B2 -30 186 76 6 1389 240 372 8 55 chr13 105381894 105381923 -14902389 - ID_B1 SINE B4 -19 205 149 6 1389 282 290 0 0 chr13 105381923 105381992 -14902320 - B1_Mur2 SINE Alu -22 127 59 6 1389 240 372 8 55 chr13 105381992 105382022 -14902290 - ID_B1 SINE B4 -19 148 84 6 1389 859 223 66 9 chr13 105382499 105382725 -14901587 + MT2A LTR ERVL 4 242 -291 6 1389 351 316 0 10 chr13 105382746 105382845 -14901467 + MT2A LTR ERVL 331 428 -105 6 1389 389 170 0 11 chr13 105382863 105382952 -14901360 + (TG)n Simple_repeat Simple_repeat 2 89 0 6 1389 1173 62 7 0 chr13 105383067 105383213 -14901099 + B1_Mus1 SINE Alu 2 148 0 6 1389 279 296 84 52 chr13 105383650 105384173 -14900139 + L1MEd LINE L1 580 1119 -5017 6 1389 550 198 20 0 chr13 105384207 105384308 -14900004 - ID_B1 SINE B4 -7 217 115 6 1389 647 281 245 33 chr13 105384608 105385126 -14899186 + L1MB5 LINE L1 5557 6184 0 6 1389 776 181 209 0 chr13 105385677 105385854 -14898458 + B3 SINE B2 2 215 -1 6 1389 643 78 17 25 chr13 105385865 105385984 -14898328 + (GAAAA)n Simple_repeat Simple_repeat 2 119 0 6 1389 458 284 146 75 chr13 105386491 105387040 -14897272 + L1MEd LINE L1 4698 5285 -861 6 1389 674 150 6 0 chr13 105387040 105387207 -14897105 + (CA)n Simple_repeat Simple_repeat 1 168 0 6 1389 1462 159 175 0 chr13 105387349 105387646 -14896666 - ORR1C1 LTR MaLR 0 378 30 6 1389 927 229 152 40 chr13 105387683 105388111 -14896201 - RLTR12B LTR ERVK -42 486 11 6 1389 293 98 0 0 chr13 105388116 105388157 -14896155 - ORR1C1 LTR MaLR -341 43 3 6 1389 313 308 39 0 chr13 105388200 105388321 -14895991 + L1MEd LINE L1 5642 5767 -473 6 1389 1258 93 23 0 chr13 105388321 105388493 -14895819 + B2_Mm2 SINE B2 2 177 -18 6 1389 279 0 0 0 chr13 105388502 105388533 -14895779 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 6 1389 230 250 0 42 chr13 105388565 105388636 -14895676 + L1MEd LINE L1 5803 5870 -370 6 1389 641 209 65 0 chr13 105388813 105388952 -14895360 - B1_Mur1 SINE Alu 0 149 2 6 1389 674 168 0 0 chr13 105388952 105389055 -14895257 - B1_Mur1 SINE Alu -45 104 2 6 1389 23 54 0 0 chr13 105389836 105389873 -14894439 + AT_rich Low_complexity Low_complexity 1 37 0 6 1389 620 241 6 71 chr13 105389891 105390061 -14894251 - Lx5 LINE L1 -35 7015 6857 6 1389 356 253 12 0 chr13 105390142 105390225 -14894087 + MLT1C LTR MaLR 132 215 -252 6 1389 413 338 141 13 chr13 105390283 105390595 -14893717 + MLT1A0 LTR MaLR 1 352 -13 6 1389 3995 49 0 0 chr13 105391256 105391728 -14892584 + L1Md_F2 LINE L1 6108 6579 -3 6 1389 342 0 0 0 chr13 105391886 105391924 -14892388 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1389 382 313 158 20 chr13 105391930 105392132 -14892180 + MLT1N2 LTR MaLR 35 264 -298 7 1389 441 36 0 0 chr13 105392275 105392330 -14891982 + (TC)n Simple_repeat Simple_repeat 1 55 0 7 1389 200 311 117 35 chr13 105392464 105392661 -14891651 - L2 LINE L2 -884 2535 2323 7 1389 204 346 22 36 chr13 105392660 105392798 -14891514 - L2c LINE L2 0 3387 3252 7 1389 268 346 10 10 chr13 105393447 105393549 -14890763 + RSINE1 SINE B4 46 147 -18 7 1389 249 309 28 42 chr13 105394228 105394370 -14889942 + MIR SINE MIR 77 216 -46 7 1389 835 216 188 22 chr13 105394562 105394815 -14889497 - MTD LTR MaLR -14 405 133 7 1389 216 67 0 0 chr13 105394815 105394845 -14889467 + (CAA)n Simple_repeat Simple_repeat 1 30 0 7 1389 835 233 185 26 chr13 105394845 105394941 -14889371 - MTD LTR MaLR -287 132 14 7 1389 1442 143 9 0 chr13 105395477 105395700 -14888612 - URR1A DNA MER1_type -1 225 1 7 1389 596 14 14 0 chr13 105395995 105396068 -14888244 + (GA)n Simple_repeat Simple_repeat 2 75 0 7 1389 200 206 0 0 chr13 105396386 105396420 -14887892 + polypyrimidine Low_complexity Low_complexity 2 35 0 7 1389 1475 72 0 20 chr13 105396777 105396975 -14887337 - B2_Mm2 SINE B2 -1 194 1 7 1389 217 322 32 11 chr13 105398496 105398590 -14885722 + MIRb SINE MIR 126 221 -47 7 1389 349 194 89 30 chr13 105399298 105399399 -14884913 - L1MD3 LINE L1 -42 7953 7847 7 1389 1399 90 11 0 chr13 105399682 105399871 -14884441 + B2_Mm1t SINE B2 2 192 -1 7 1389 291 145 0 42 chr13 105399907 105399979 -14884333 + GA-rich Low_complexity Low_complexity 2 70 0 7 1389 231 330 177 11 chr13 105400321 105400502 -14883810 - L1ME3A LINE L1 0 6173 5963 7 1389 16599 94 6 1 chr13 105401726 105404782 -14879530 + L1_Mus3 LINE L1 3531 6603 -35 7 1389 189 0 0 0 chr13 105405098 105405119 -14879193 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 7 1389 27 29 0 0 chr13 105405700 105405734 -14878578 + AT_rich Low_complexity Low_complexity 1 34 0 7 1389 23 54 0 0 chr13 105407645 105407682 -14876630 + AT_rich Low_complexity Low_complexity 1 37 0 7 1389 387 0 0 0 chr13 105409531 105409574 -14874738 + (TCTA)n Simple_repeat Simple_repeat 4 46 0 7 1389 216 0 0 0 chr13 105410417 105410441 -14873871 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1389 212 100 25 0 chr13 105411103 105411143 -14873169 + (CAA)n Simple_repeat Simple_repeat 1 41 0 7 1389 2644 210 151 31 chr13 105411307 105412102 -14872210 - RMER19B LTR ERVK -12 890 1 7 1389 214 273 15 0 chr13 105412204 105412270 -14872042 - ID4_ SINE ID 0 83 17 7 1389 315 357 66 54 chr13 105412508 105412840 -14871472 - ORR1E LTR MaLR -5 354 19 7 1389 243 322 137 25 chr13 105414281 105414485 -14869827 + MIR SINE MIR 2 228 -34 7 1389 613 96 59 48 chr13 105414681 105414868 -14869444 - RMER17A2 LTR ERVK -396 510 322 7 1389 187 299 117 0 chr13 105415027 105415104 -14869208 - L2a LINE L2 -8 3418 3333 7 1389 529 337 35 10 chr13 105415157 105415358 -14868954 - B3 SINE B2 -10 206 1 7 1389 210 302 31 20 chr13 105415368 105415466 -14868846 + MIRb SINE MIR 120 218 -50 7 1389 421 308 198 48 chr13 105415570 105416179 -14868133 - L2a LINE L2 -293 3133 2437 7 1389 294 95 0 0 chr13 105418485 105418527 -14865785 + (CTA)n Simple_repeat Simple_repeat 3 44 0 7 1389 4729 197 47 4 chr13 105418768 105419748 -14864564 + Lx9 LINE L1 6622 7643 -1 7 1389 300 97 48 0 chr13 105422310 105422372 -14861940 + (CAA)n Simple_repeat Simple_repeat 2 66 0 7 1389 243 191 93 93 chr13 105422392 105422467 -14861845 + ID SINE ID 2 76 -148 7 1389 1486 197 161 14 chr13 105423872 105424238 -14860074 + MTC LTR MaLR 1 420 -1 7 1389 181 135 0 37 chr13 105426948 105427002 -14857310 + (TAA)n Simple_repeat Simple_repeat 3 54 0 7 1389 594 200 0 31 chr13 105427010 105427139 -14857173 - B3 SINE B2 -1 215 91 7 1389 443 128 0 37 chr13 105427139 105427220 -14857092 + L1_Mur2 LINE L1 3796 3873 -2004 7 1389 528 244 84 0 chr13 105427220 105427339 -14856973 - B3 SINE B2 -61 155 27 7 1389 225 0 0 0 chr13 105427459 105427484 -14856828 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 1389 7247 74 37 0 chr13 105427484 105428441 -14855871 - L1_Mus3 LINE L1 -8 6630 5639 7 1389 4282 91 3 0 chr13 105428441 105429023 -14855289 + L1_Mus3 LINE L1 4970 5553 -330 7 1389 312 231 0 71 chr13 105429023 105429107 -14855205 - B2_Mm2 SINE B2 -117 78 1 7 1389 221 295 127 32 chr13 105429248 105429374 -14854938 - L2b LINE L2 -2 3373 3236 7 1389 313 231 39 0 chr13 105429518 105429596 -14854716 - ID4_ SINE ID 0 83 3 7 1389 232 174 22 0 chr13 105430497 105430543 -14853769 + CT-rich Low_complexity Low_complexity 2 48 0 7 1389 542 308 136 20 chr13 105432121 105432416 -14851896 - MLT1A LTR MaLR -13 361 33 7 1389 265 316 10 10 chr13 105432751 105432850 -14851462 - L1MC3 LINE L1 -207 7578 7480 7 1389 562 248 89 106 chr13 105432964 105433059 -14851253 - B4A SINE B4 -57 235 124 7 1389 207 0 0 0 chr13 105433059 105433082 -14851230 + (C)n Simple_repeat Simple_repeat 1 23 0 7 1389 562 248 89 106 chr13 105433082 105433221 -14851091 - B4A SINE B4 -169 123 5 7 1389 311 290 185 30 chr13 105433238 105433540 -14850772 - L1MC3 LINE L1 -316 7469 7121 7 1389 1560 179 71 3 chr13 105434436 105434772 -14849540 + ORR1B2 LTR MaLR 1 359 -8 7 1389 1020 31 94 0 chr13 105435007 105435134 -14849178 + B1_Mus2 SINE Alu 2 140 -7 7 1389 180 0 0 0 chr13 105435135 105435155 -14849157 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 7 1389 919 104 214 0 chr13 105436712 105436866 -14847446 + B2_Mm2 SINE B2 1 187 -8 7 1389 1127 48 14 7 chr13 105436866 105437011 -14847301 + B1_Mus1 SINE Alu 1 147 -1 7 1389 342 315 28 9 chr13 105437350 105437459 -14846853 - MIR SINE MIR -146 116 6 7 1389 542 237 215 0 chr13 105437791 105437968 -14846344 + ID_B1 SINE B4 2 216 -8 7 1389 311 250 159 9 chr13 105438139 105438252 -14846060 - ID_B1 SINE B4 -7 217 88 7 1389 746 219 0 0 chr13 105438272 105438409 -14845903 - B1_Mur2 SINE Alu 0 149 13 7 1389 305 291 0 71 chr13 105438440 105438525 -14845787 - B1F1 SINE Alu -65 84 6 7 1389 424 191 56 11 chr13 105438548 105438638 -14845674 + ID_B1 SINE B4 127 220 -4 7 1389 192 40 0 0 chr13 105438649 105438674 -14845638 + (CCCA)n Simple_repeat Simple_repeat 2 26 0 7 1389 29 0 0 0 chr13 105439201 105439230 -14845082 + AT_rich Low_complexity Low_complexity 1 29 0 7 1389 327 260 149 99 chr13 105439847 105440129 -14844183 + L1MEf LINE L1 832 1127 -5115 7 1389 413 311 101 42 chr13 105440139 105440615 -14843697 + L1MEf LINE L1 4530 5033 -1113 7 1389 25 51 0 0 chr13 105440731 105440770 -14843542 + AT_rich Low_complexity Low_complexity 1 39 0 7 1389 547 267 22 29 chr13 105441617 105441756 -14842556 - RSINE1 SINE B4 0 165 28 7 1389 329 202 71 0 chr13 105441820 105441919 -14842393 + Charlie1b DNA MER1_type 205 310 -213 7 1389 1831 196 62 20 chr13 105441919 105442225 -14842087 + Lx9 LINE L1 6702 7028 -616 7 1389 216 0 0 0 chr13 105442225 105442249 -14842063 + (CA)n Simple_repeat Simple_repeat 1 24 0 7 1389 1831 196 62 20 chr13 105442249 105442347 -14841965 + Lx9 LINE L1 7029 7122 -522 7 1389 767 75 0 0 chr13 105442347 105442454 -14841858 + B1_Mus2 SINE Alu 40 146 -1 7 1389 207 0 0 0 chr13 105442455 105442478 -14841834 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 7 1389 968 235 122 8 chr13 105442479 105442877 -14841435 + Lx9 LINE L1 7143 7611 -33 7 1389 256 221 181 7 chr13 105442878 105443033 -14841279 + Charlie1b DNA MER1_type 303 484 -39 7 1389 238 227 213 6 chr13 105443854 105444018 -14840294 + L1MEf LINE L1 5542 5739 -434 7 1389 25 31 0 0 chr13 105444092 105444124 -14840188 + AT_rich Low_complexity Low_complexity 1 32 0 7 1389 197 65 0 31 chr13 105444238 105444270 -14840042 + (TA)n Simple_repeat Simple_repeat 1 31 0 7 1389 482 113 8 50 chr13 105445146 105445267 -14839045 + CT-rich Low_complexity Low_complexity 1 116 0 7 1389 860 298 93 21 chr13 105446263 105446596 -14837716 - MER121 Unknown Unknown -22 390 34 7 1389 414 121 0 0 chr13 105447606 105447672 -14836640 + (TTTC)n Simple_repeat Simple_repeat 3 68 0 7 1389 911 160 6 0 chr13 105447673 105447848 -14836464 + CT-rich Low_complexity Low_complexity 2 177 0 7 1389 1156 97 57 0 chr13 105449982 105450158 -14834154 - B2_Mm2 SINE B2 -8 187 2 7 1389 553 252 8 0 chr13 105450223 105450346 -14833966 - B3 SINE B2 -92 124 1 7 1389 319 143 0 0 chr13 105450748 105450797 -14833515 + HAL1-3A_ME LINE L1 1963 2011 -847 7 1389 342 115 0 0 chr13 105450797 105450849 -14833463 + (CACG)n Simple_repeat Simple_repeat 4 55 0 7 1389 1341 179 33 21 chr13 105450934 105451271 -14833041 + L1Md_F LINE L1 21 361 -6158 7 1389 252 0 0 0 chr13 105452394 105452422 -14831890 + (T)n Simple_repeat Simple_repeat 1 28 0 7 1389 239 341 99 51 chr13 105452504 105452777 -14831535 + L2b LINE L2 3070 3408 -18 7 1389 322 336 0 53 chr13 105453198 105453311 -14831001 - PB1D10 SINE Alu -10 107 1 7 1389 2274 146 59 33 chr13 105453402 105453828 -14830484 + Lx4A LINE L1 6622 7058 0 7 1389 395 327 128 13 chr13 105454474 105454700 -14829612 - L1MC LINE L1 -768 5378 5127 7 1389 222 115 49 0 chr13 105454717 105454778 -14829534 + (CA)n Simple_repeat Simple_repeat 2 65 0 7 1389 414 0 0 0 chr13 105455767 105455813 -14828499 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 7 1389 249 60 0 20 chr13 105455831 105455882 -14828430 - L1Md_F2 LINE L1 -5 6577 6528 7 1389 411 111 0 16 chr13 105455885 105455949 -14828363 - B1_Mus1 SINE Alu -85 63 1 7 1389 380 35 0 34 chr13 105455956 105456015 -14828297 - L1Md_F2 LINE L1 -12 6570 6514 7 1389 30718 75 41 6 chr13 105456015 105461805 -14822507 - L1Md_F2 LINE L1 -205 6377 373 7 1389 755 117 8 32 chr13 105462533 105462657 -14821655 - B1_Mur3 SINE Alu 0 149 29 7 1389 980 232 0 36 chr13 105462673 105462896 -14821416 - B3 SINE B2 0 216 2 7 1389 915 232 14 9 chr13 105463376 105463589 -14820723 + B3 SINE B2 2 215 -1 7 1389 496 53 26 0 chr13 105464086 105464162 -14820150 + (TG)n Simple_repeat Simple_repeat 2 79 0 7 1389 3008 51 0 0 chr13 105466177 105466531 -14817781 + IAPEY2_LTR LTR ERVK 1 354 -3 7 1389 8847 124 14 21 chr13 105466531 105468160 -14816152 + IAPEY3-int LTR ERVK 17 1982 -5698 7 1389 3417 60 9 0 chr13 105468137 105468585 -14815727 + IAPEY3-int LTR ERVK 2238 2689 -4991 7 1389 203 368 44 0 chr13 105468600 105468714 -14815598 + L3b LINE CR1 335 453 -29 7 1389 2716 65 62 0 chr13 105468714 105469370 -14814942 + IAPEY3-int LTR ERVK 6984 7680 0 7 1389 3115 39 0 0 chr13 105469370 105469727 -14814585 + IAPEY2_LTR LTR ERVK 1 357 0 7 1389 224 111 22 0 chr13 105469739 105469784 -14814528 + (CAAG)n Simple_repeat Simple_repeat 2 47 0 7 1389 203 350 100 67 chr13 105470074 105470313 -14813999 - MIR SINE MIR -1 261 15 8 1389 21 0 0 0 chr13 105471264 105471285 -14813027 + AT_rich Low_complexity Low_complexity 1 21 0 8 1389 240 206 159 0 chr13 105471964 105472027 -14812285 - MIRb SINE MIR -88 180 108 8 1389 399 279 142 7 chr13 105472092 105472233 -14812079 - RSINE1 SINE B4 -2 163 4 8 1389 698 213 181 0 chr13 105472234 105472422 -14811890 - B4A SINE B4 -65 227 6 8 1389 362 258 0 0 chr13 105472526 105472615 -14811697 - PB1D9 SINE Alu -1 119 31 8 1389 1092 245 97 78 chr13 105472592 105473089 -14811223 + RLTR12B LTR ERVK 12 512 -56 8 1389 610 268 59 12 chr13 105473242 105473412 -14810900 + B3A SINE B2 3 180 -18 8 1389 26 74 0 0 chr13 105473650 105473704 -14810608 + AT_rich Low_complexity Low_complexity 1 54 0 8 1389 417 259 13 70 chr13 105474765 105474923 -14809389 - MIRb SINE MIR -94 174 26 8 1389 202 214 0 23 chr13 105477424 105477467 -14806845 + CT-rich Low_complexity Low_complexity 1 42 0 8 1389 630 248 33 75 chr13 105477534 105477774 -14806538 + Lx8 LINE L1 6195 6424 -1049 8 1389 335 306 29 84 chr13 105477778 105478017 -14806295 + Lx8 LINE L1 7232 7457 -16 8 1389 342 264 70 21 chr13 105479329 105479472 -14804840 + L1MB7 LINE L1 5740 5889 -295 8 1389 486 264 15 74 chr13 105479511 105479646 -14804666 + MTEa LTR MaLR 34 160 -219 8 1389 607 288 31 35 chr13 105479652 105479879 -14804433 + RLTR11A2 LTR ERVK 34 259 -268 8 1389 311 234 87 92 chr13 105479937 105480121 -14804191 + RLTR11A2 LTR ERVK 230 412 -41 8 1389 24 32 0 0 chr13 105480140 105480171 -14804141 + AT_rich Low_complexity Low_complexity 1 31 0 8 1389 348 145 107 65 chr13 105480294 105480406 -14803906 + MTEa LTR MaLR 252 377 -2 8 1389 255 309 134 33 chr13 105481212 105481549 -14802763 + L1M5 LINE L1 4035 4398 -1748 8 1389 275 71 24 0 chr13 105481553 105481595 -14802717 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 8 1389 1207 54 0 0 chr13 105481597 105481744 -14802568 - B1_Mm SINE Alu 0 147 1 8 1389 324 293 79 73 chr13 105481769 105481946 -14802366 + L1M5 LINE L1 4442 4619 -1527 8 1389 246 32 0 0 chr13 105482066 105482097 -14802215 + (TG)n Simple_repeat Simple_repeat 1 31 0 8 1389 180 0 0 0 chr13 105482097 105482116 -14802196 + (GA)n Simple_repeat Simple_repeat 1 20 0 8 1389 230 186 0 0 chr13 105482122 105482165 -14802147 + MT2B2 LTR ERVL 542 584 0 8 1389 453 229 35 158 chr13 105482245 105482530 -14801782 - Charlie5 DNA MER1_type -10 2614 2365 8 1389 219 370 154 20 chr13 105482711 105483056 -14801256 - L2 LINE L2 -349 3070 2680 8 1389 1120 62 14 7 chr13 105483267 105483412 -14800900 + B1_Mus2 SINE Alu 2 147 0 8 1389 288 0 0 0 chr13 105483453 105483485 -14800827 + (TG)n Simple_repeat Simple_repeat 2 33 0 8 1389 28 48 0 0 chr13 105483869 105483911 -14800401 + AT_rich Low_complexity Low_complexity 1 42 0 8 1389 308 295 75 48 chr13 105484004 105484150 -14800162 - MER112 DNA MER1_type -99 162 13 8 1389 351 0 0 0 chr13 105485732 105485771 -14798541 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1389 237 192 19 0 chr13 105488339 105488391 -14795921 + (TA)n Simple_repeat Simple_repeat 2 54 0 8 1389 330 275 0 0 chr13 105488462 105488531 -14795781 + tRNA-Ala-GCY_ tRNA tRNA 2 70 -5 8 1389 229 320 127 6 chr13 105488719 105488868 -14795444 - MIR3 SINE MIR -4 204 45 8 1389 371 318 72 5 chr13 105489305 105489498 -14794814 + L1MC4 LINE L1 6763 6968 -1074 8 1389 258 273 56 22 chr13 105490203 105490293 -14794019 + B4A SINE B4 81 173 -119 8 1389 516 220 4 10 chr13 105490220 105490328 -14793984 + B1_Mus1 SINE Alu 15 118 -2 8 1389 920 204 0 0 chr13 105490976 105491123 -14793189 + B1_Mus2 SINE Alu 1 147 0 8 1389 608 159 164 16 chr13 105492327 105492455 -14791857 + B1_Mus2 SINE Alu 1 147 0 8 1389 372 231 88 37 chr13 105492481 105492547 -14791765 - L1MA8 LINE L1 -18 6273 6209 8 1389 357 24 0 0 chr13 105492547 105492589 -14791723 + (CA)n Simple_repeat Simple_repeat 2 43 0 8 1389 372 231 88 37 chr13 105492589 105492738 -14791574 - L1MA8 LINE L1 -83 6208 6048 8 1389 231 36 0 0 chr13 105492784 105492812 -14791500 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1389 475 231 177 70 chr13 105492812 105492848 -14791464 - B3 SINE B2 -36 180 150 8 1389 204 40 0 0 chr13 105492848 105492873 -14791439 + (TG)n Simple_repeat Simple_repeat 2 26 0 8 1389 475 231 177 70 chr13 105492873 105492994 -14791318 - B3 SINE B2 -67 149 6 8 1389 253 222 82 72 chr13 105492995 105493092 -14791220 - L1MA7 LINE L1 -236 6055 5958 8 1389 823 164 0 0 chr13 105493191 105493319 -14790993 - B1_Mur1 SINE Alu -12 137 10 8 1389 250 254 30 45 chr13 105493444 105493510 -14790802 - B3 SINE B2 -37 179 115 8 1389 746 178 158 0 chr13 105493510 105493662 -14790650 - URR1A DNA MER1_type -50 176 1 8 1389 1782 241 68 21 chr13 105494992 105495509 -14788803 - Lx7 LINE L1 -616 7080 6540 8 1389 707 167 7 57 chr13 105496049 105496189 -14788123 + B1_Mus2 SINE Alu 15 147 0 8 1389 6718 55 0 9 chr13 105497465 105497547 -14786765 - L1_Mm LINE L1 -1 5882 5807 8 1389 1889 157 19 7 chr13 105497547 105497854 -14786458 - RLTR10E LTR ERVK 0 311 1 8 1389 6718 55 0 9 chr13 105497854 105498657 -14785655 - L1Md_F2 LINE L1 -77 5806 5005 8 1389 5812 44 0 1 chr13 105498658 105499365 -14784947 + L1Md_F2 LINE L1 5877 6582 0 8 1389 234 62 0 0 chr13 105500622 105500654 -14783658 + (TCTG)n Simple_repeat Simple_repeat 1 32 0 1 1389 267 114 0 0 chr13 105500655 105500699 -14783613 + (CCTA)n Simple_repeat Simple_repeat 4 47 0 2 1389 813 129 0 0 chr13 105500735 105500874 -14783438 + (TTTC)n Simple_repeat Simple_repeat 4 142 0 3 1389 281 202 0 37 chr13 105500859 105500941 -14783371 + (TCCA)n Simple_repeat Simple_repeat 2 80 0 4 1389 240 265 0 0 chr13 105500955 105501004 -14783308 - B1F SINE Alu -5 144 96 5 1389 306 132 0 0 chr13 105501073 105501126 -14783186 + (TTCA)n Simple_repeat Simple_repeat 3 55 0 6 1389 3195 56 2 2 chr13 105501161 105501557 -14782755 + MTA_Mm LTR MaLR 1 396 0 7 1389 1187 68 0 0 chr13 105501903 105502051 -14782261 - B1_Mus1 SINE Alu 0 148 1 8 1389 1437 253 97 3 chr13 105502110 105502490 -14781822 + MTD LTR MaLR 1 416 -3 9 1389 270 0 0 0 chr13 105502869 105502899 -14781413 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1389 26 30 0 0 chr13 105503310 105503343 -14780969 + AT_rich Low_complexity Low_complexity 1 33 0 1 1389 411 382 23 8 chr13 105503693 105503825 -14780487 + RSINE1 SINE B4 30 163 -2 1 1389 324 0 0 0 chr13 105503832 105503868 -14780444 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1389 1172 50 0 0 chr13 105504135 105504276 -14780036 + B1_Mm SINE Alu 1 141 -6 1 1389 21 0 0 0 chr13 105504279 105504300 -14780012 + AT_rich Low_complexity Low_complexity 1 21 0 1 1389 235 265 0 20 chr13 105504302 105504352 -14779960 - RSINE1 SINE B4 -115 50 2 1 1389 25 31 0 0 chr13 105505054 105505086 -14779226 + AT_rich Low_complexity Low_complexity 1 32 0 1 1389 252 0 0 0 chr13 105505314 105505342 -14778970 + (TACTG)n Simple_repeat Simple_repeat 1 28 0 1 1389 2279 129 55 51 chr13 105505342 105505787 -14778525 + RLTR11B LTR ERVK 6 453 0 1 1389 307 193 231 57 chr13 105505787 105505894 -14778418 + B3 SINE B2 106 215 -1 2 1389 439 272 73 45 chr13 105505955 105506132 -14778180 + B3A SINE B2 1 182 -16 2 1389 378 270 91 41 chr13 105506287 105506507 -14777805 + L1MC4a LINE L1 7107 7337 -545 2 1389 23 0 0 0 chr13 105506624 105506647 -14777665 + AT_rich Low_complexity Low_complexity 1 23 0 2 1389 320 152 719 0 chr13 105506667 105506795 -14777517 - URR1B DNA MER1_type -5 220 1 2 1389 325 256 199 22 chr13 105506800 105506936 -14777376 + L1MC4a LINE L1 7661 7820 -175 2 1389 275 300 85 82 chr13 105507067 105507348 -14776964 + RSINE1 SINE B4 10 290 -2 2 1389 21 57 0 0 chr13 105507391 105507426 -14776886 + AT_rich Low_complexity Low_complexity 1 35 0 2 1389 9440 108 19 4 chr13 105507622 105509013 -14775299 + L1_Mm LINE L1 4472 5883 0 2 1389 2873 49 3 8 chr13 105509017 105509386 -14774926 + L1_Mus2 LINE L1 6200 6566 0 2 1389 544 307 92 46 chr13 105509491 105509730 -14774582 + B4A SINE B4 25 274 -18 2 1389 180 0 0 0 chr13 105510109 105510129 -14774183 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3 1389 407 354 73 28 chr13 105510246 105510464 -14773848 + B4 SINE B4 55 282 -10 3 1389 1102 222 118 30 chr13 105510835 105511174 -14773138 + ORR1D2 LTR MaLR 2 370 0 3 1389 1633 195 134 11 chr13 105511175 105511549 -14772763 - MTC LTR MaLR 0 421 2 3 1389 22 0 0 0 chr13 105511898 105511920 -14772392 + AT_rich Low_complexity Low_complexity 1 22 0 3 1389 523 196 45 36 chr13 105511960 105512071 -14772241 + B1F SINE Alu 29 140 -9 3 1389 4249 75 9 2 chr13 105512096 105512668 -14771644 - L1_Mus1 LINE L1 0 6567 5992 3 173 472 153 109 45 chr13 105512939 105513098 -14771214 + Lx LINE L1 6510 6652 -2 3 1390 15143 3 0 0 chr13 105513182 105515578 -14768734 - L1Md_A LINE L1 0 6582 4187 3 1390 25 65 0 0 chr13 105515696 105515742 -14768570 + AT_rich Low_complexity Low_complexity 1 46 0 3 1390 805 234 60 5 chr13 105515933 105516118 -14768194 - RMER30 DNA MER1_type -1 201 7 4 1390 546 186 0 63 chr13 105517327 105517453 -14766859 + B1_Mur4 SINE Alu 1 118 -32 4 1390 324 0 0 0 chr13 105517453 105517489 -14766823 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1390 375 243 27 81 chr13 105517489 105517501 -14766811 + B4 SINE B4 207 218 -74 4 1390 335 201 116 45 chr13 105517517 105517715 -14766597 - MER33 DNA MER1_type -69 255 44 4 1390 345 304 39 36 chr13 105518291 105518452 -14765860 + MIR SINE MIR 8 179 -97 4 1390 26 0 0 0 chr13 105518532 105518558 -14765754 + AT_rich Low_complexity Low_complexity 1 26 0 4 1390 217 321 24 12 chr13 105519841 105519923 -14764389 + B4 SINE B4 14 96 -196 4 1390 470 288 0 46 chr13 105519923 105520076 -14764236 + B1_Mur1 SINE Alu 1 146 -3 4 1390 1959 262 56 8 chr13 105520994 105521491 -14762821 + Lx8 LINE L1 6206 6726 -747 4 1390 1878 236 96 6 chr13 105521470 105521981 -14762331 + Lx6 LINE L1 6904 7460 0 5 1390 628 115 10 0 chr13 105522056 105522152 -14762160 + URR1B DNA MER1_type 87 183 -42 5 1390 922 308 181 19 chr13 105522157 105522671 -14761641 + Lx8 LINE L1 6731 7327 -146 4 1390 214 167 0 0 chr13 105524100 105524136 -14760176 + (CCAA)n Simple_repeat Simple_repeat 4 39 0 5 1390 793 153 0 0 chr13 105525158 105525282 -14759030 - B1_Mus1 SINE Alu 0 148 25 5 1390 414 0 0 0 chr13 105525282 105525328 -14758984 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1390 315 0 0 0 chr13 105525328 105525362 -14758950 + (GA)n Simple_repeat Simple_repeat 1 35 0 5 1390 1185 54 0 13 chr13 105525432 105525582 -14758730 - B1_Mus1 SINE Alu 0 148 1 5 1390 7736 65 1 6 chr13 105525605 105526798 -14757514 - L1_Mus2 LINE L1 0 6566 5379 5 1390 873 287 33 7 chr13 105527293 105527563 -14756749 + B4A SINE B4 2 278 -14 5 1390 414 0 0 0 chr13 105527604 105527650 -14756662 + (CA)n Simple_repeat Simple_repeat 2 47 0 5 1390 570 268 85 45 chr13 105528259 105528482 -14755830 - B4A SINE B4 -59 233 2 6 1390 544 188 145 48 chr13 105529729 105529874 -14754438 - B3A SINE B2 0 198 40 6 1390 486 33 0 0 chr13 105530315 105530375 -14753937 + (CA)n Simple_repeat Simple_repeat 2 61 0 6 1390 200 167 20 40 chr13 105531379 105531429 -14752883 + GA-rich Low_complexity Low_complexity 1 49 0 6 1390 186 189 0 0 chr13 105531490 105531527 -14752785 + GA-rich Low_complexity Low_complexity 3 39 0 6 1390 21 0 0 0 chr13 105532050 105532071 -14752241 + AT_rich Low_complexity Low_complexity 1 21 0 6 1390 855 249 52 9 chr13 105532392 105532603 -14751709 + B4A SINE B4 1 220 -72 6 1390 785 234 101 31 chr13 105534557 105534914 -14749398 + L1M4 LINE L1 2648 3029 -3117 6 1390 230 188 62 0 chr13 105535241 105535289 -14749023 - MIRb SINE MIR -99 169 119 6 1390 308 193 110 65 chr13 105536244 105536399 -14747913 + L1MA7 LINE L1 6130 6291 0 6 1390 470 227 127 0 chr13 105537249 105537359 -14746953 + RSINE1 SINE B4 2 125 -40 6 1390 23 0 0 0 chr13 105538053 105538076 -14746236 + AT_rich Low_complexity Low_complexity 1 23 0 7 1390 200 188 0 0 chr13 105538708 105538740 -14745572 + (TTG)n Simple_repeat Simple_repeat 2 33 0 7 1390 455 329 7 0 chr13 105539120 105539257 -14745055 - B1F1 SINE Alu -11 138 1 7 1390 341 332 141 52 chr13 105539415 105539487 -14744825 - L1ME2 LINE L1 -1 6163 6095 7 1390 258 95 0 0 chr13 105539487 105539529 -14744783 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1390 341 332 141 52 chr13 105539529 105539783 -14744529 - L1ME2 LINE L1 -70 6094 5809 7 1390 1249 208 184 31 chr13 105540173 105540531 -14743781 - MTC LTR MaLR -8 413 1 7 1390 204 235 0 19 chr13 105542076 105542128 -14742184 + (CATAA)n Simple_repeat Simple_repeat 2 52 0 7 1390 2985 26 3 0 chr13 105542454 105542799 -14741513 + ORR1A0 LTR MaLR 1 346 0 7 1390 1023 96 43 25 chr13 105542840 105543001 -14741311 - B2_Mm2 SINE B2 -12 183 20 7 1390 671 304 29 44 chr13 105543105 105543377 -14740935 + Lx8 LINE L1 7197 7464 -9 7 1390 242 109 0 42 chr13 105543692 105543740 -14740572 + GA-rich Low_complexity Low_complexity 2 47 0 8 1390 797 257 169 4 chr13 105544322 105544711 -14739601 + L1MB2 LINE L1 5511 5961 -207 8 1390 4406 57 7 5 chr13 105545010 105545577 -14738735 + L1Md_F2 LINE L1 5996 6563 -19 8 1390 231 339 9 18 chr13 105545708 105545819 -14738493 - L3 LINE CR1 -183 4306 4197 8 1390 211 216 78 0 chr13 105545790 105545841 -14738471 - L2 LINE L2 -828 2591 2537 8 1390 215 229 113 16 chr13 105545960 105546022 -14738290 + PB1D7 SINE Alu 15 82 -38 8 1390 675 0 0 0 chr13 105546637 105546712 -14737600 + (TC)n Simple_repeat Simple_repeat 2 76 0 8 1390 364 291 39 0 chr13 105547207 105547310 -14737002 + PB1D10 SINE Alu 5 111 -6 8 1390 1461 216 43 9 chr13 105547453 105547775 -14736537 + RMER15 LTR ERVL 190 522 -53 8 1390 431 309 9 0 chr13 105548093 105548203 -14736109 + ID_B1 SINE B4 81 191 -33 8 1390 22 35 0 0 chr13 105548221 105548250 -14736062 + AT_rich Low_complexity Low_complexity 1 29 0 9 1390 253 276 109 55 chr13 105548868 105549033 -14735279 + RLTR20A LTR ERVK 82 255 -286 9 1390 1980 54 0 0 chr13 105550016 105550258 -14734054 - L1_Mus1 LINE L1 0 6567 6326 9 1390 233 250 95 27 chr13 105550769 105550843 -14733469 - L2b LINE L2 0 3375 3297 9 1390 988 315 71 90 chr13 105551176 105551643 -14732669 + LTR86A1 LTR ERVL 56 513 0 9 1390 494 307 71 46 chr13 105552183 105552466 -14731846 - B4A SINE B4 -2 290 1 9 1390 411 200 81 32 chr13 105552635 105552741 -14731571 + RSINE1 SINE B4 4 118 -47 9 1390 270 81 0 0 chr13 105552741 105552778 -14731534 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1390 411 200 81 32 chr13 105552778 105552795 -14731517 + RSINE1 SINE B4 119 133 -32 9 1390 362 288 28 0 chr13 105554082 105554211 -14730101 + B1F SINE Alu 1 141 -8 9 1390 591 283 52 47 chr13 105554425 105554618 -14729694 + B3A SINE B2 1 194 -4 9 1390 536 125 10 0 chr13 105554618 105554714 -14729598 + (GGA)n Simple_repeat Simple_repeat 2 98 0 1 1390 180 244 22 0 chr13 105557049 105557094 -14727218 - MIR SINE MIR -49 213 168 1 1390 193 147 0 56 chr13 105557112 105557148 -14727164 - MIRc SINE MIR -222 46 13 1 1390 308 309 26 26 chr13 105557164 105557304 -14727008 - MTEa LTR MaLR 0 379 240 1 1390 545 286 38 0 chr13 105557420 105557553 -14726759 + ID_B1 SINE B4 84 221 -3 1 1390 36380 14 1 7 chr13 105557691 105562957 -14721355 + L1Md_A LINE L1 357 5586 -297 1 1390 8752 18 0 0 chr13 105562957 105563952 -14720360 + L1Md_A LINE L1 5587 6581 -1 1 1390 1055 280 132 51 chr13 105564304 105564894 -14719418 + Charlie1a DNA MER1_type 13 650 -805 1 1390 1469 23 0 0 chr13 105564908 105565083 -14719229 + L1Md_T LINE L1 5411 5585 -298 1 1390 8514 29 0 1 chr13 105565084 105566123 -14718189 + L1Md_T LINE L1 5587 6582 0 1 1390 2438 241 40 32 chr13 105566145 105566898 -14717414 + Charlie1a DNA MER1_type 690 1448 -7 1 1390 1574 115 187 33 chr13 105566984 105567289 -14717023 + RMER6D LTR ERVK 1 352 -368 1 1390 206 139 0 27 chr13 105567436 105567473 -14716839 + A-rich Low_complexity Low_complexity 4 39 0 1 1390 24 0 0 0 chr13 105568092 105568116 -14716196 + AT_rich Low_complexity Low_complexity 1 24 0 1 1390 245 232 145 0 chr13 105570494 105570563 -14713749 - ID4 SINE ID -3 80 2 1 1390 292 265 74 22 chr13 105570576 105570711 -14713601 - B1F1 SINE Alu -7 142 1 1 1390 546 224 16 16 chr13 105572461 105572588 -14711724 - RLTR22_Mur LTR ERVK -134 1714 1588 1 1390 504 194 0 0 chr13 105572648 105572753 -14711559 - RLTR22_Mur LTR ERVK -993 815 711 1 1390 269 338 76 19 chr13 105572871 105573028 -14711284 - MLT1J LTR MaLR 0 512 347 1 1390 2988 267 36 10 chr13 105573363 105574175 -14710137 + Lx8 LINE L1 6191 7023 -450 1 1390 1239 221 94 81 chr13 105574484 105574918 -14709394 + Lx8 LINE L1 7029 7468 -5 1 1390 30 59 0 0 chr13 105574918 105574969 -14709343 + AT_rich Low_complexity Low_complexity 1 51 0 1 1390 1058 204 37 0 chr13 105574969 105575160 -14709152 - B3 SINE B2 -4 212 15 1 1390 207 189 0 0 chr13 105575171 105575224 -14709088 + (CTA)n Simple_repeat Simple_repeat 1 53 0 1 1390 359 312 125 0 chr13 105575295 105575423 -14708889 - MLT1J LTR MaLR -344 168 25 1 1390 341 109 16 0 chr13 105576546 105576610 -14707702 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1390 336 239 44 33 chr13 105576615 105576706 -14707606 - B4A SINE B4 -16 276 185 1 1390 353 233 67 0 chr13 105578073 105578163 -14706149 - B1F SINE Alu -52 97 2 1 1390 264 306 111 98 chr13 105578303 105578600 -14705712 - MLT1A1 LTR MaLR -55 353 53 1 1390 1107 68 13 13 chr13 105579154 105579304 -14705008 + B1_Mur4 SINE Alu 1 150 0 1 1390 293 0 27 0 chr13 105579305 105579342 -14704970 + (CAAAAA)n Simple_repeat Simple_repeat 3 40 0 1 1390 339 163 0 0 chr13 105580374 105580423 -14703889 - RSINE1 SINE B4 -40 125 77 1 1390 1414 76 16 0 chr13 105580943 105581128 -14703184 - B2_Mm2 SINE B2 -5 190 3 1 1390 30 0 0 0 chr13 105581676 105581706 -14702606 + AT_rich Low_complexity Low_complexity 1 30 0 1 1390 1170 128 21 11 chr13 105583753 105583943 -14700369 + B2_Mm1t SINE B2 1 192 -1 1 1390 581 226 6 70 chr13 105583956 105584113 -14700199 + B1F2 SINE Alu 3 149 0 1 1390 227 308 26 96 chr13 105584310 105584425 -14699887 + Charlie4z DNA MER1_type 7 113 -54 1 1390 1650 189 62 16 chr13 105585387 105585873 -14698439 - RLTR12A LTR ERVK -4 564 11 1 1390 234 91 0 0 chr13 105585873 105585906 -14698406 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1390 234 0 0 0 chr13 105585906 105585932 -14698380 + (TG)n Simple_repeat Simple_repeat 1 26 0 1 1390 365 221 62 21 chr13 105585962 105586059 -14698253 - RSINE1 SINE B4 -61 104 4 1 1390 469 248 19 58 chr13 105587630 105587784 -14696528 - B1F SINE Alu -1 148 1 1 1390 22 0 0 0 chr13 105588145 105588167 -14696145 + AT_rich Low_complexity Low_complexity 1 22 0 1 1390 661 235 125 5 chr13 105588168 105588352 -14695960 - B3 SINE B2 -8 208 3 1 1390 239 252 150 18 chr13 105588359 105588472 -14695840 + L1MA8 LINE L1 6133 6260 -31 1 1390 322 340 19 0 chr13 105588518 105588624 -14695688 + PB1D10 SINE Alu 3 110 -7 1 1390 636 251 103 69 chr13 105589283 105589574 -14694738 + MLT2C2 LTR ERVL 1 301 -163 1 1390 22 0 0 0 chr13 105589625 105589647 -14694665 + AT_rich Low_complexity Low_complexity 1 22 0 1 1390 382 339 88 10 chr13 105589667 105589861 -14694451 - L3 LINE CR1 -1015 3474 3266 1 1390 397 180 180 0 chr13 105589857 105589946 -14694366 + MIR3 SINE MIR 95 199 -9 1 1390 1191 104 66 0 chr13 105592580 105592762 -14691550 + B2_Mm2 SINE B2 1 194 -1 1 1390 442 90 512 0 chr13 105592798 105592917 -14691395 + B2_Mm2 SINE B2 11 190 -5 1 1390 479 17 17 0 chr13 105592932 105592992 -14691320 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1390 190 191 106 0 chr13 105593486 105593533 -14690779 - L3 LINE CR1 -576 3913 3862 1 1390 23 33 0 0 chr13 105593764 105593794 -14690518 + AT_rich Low_complexity Low_complexity 1 30 0 1 1390 22 0 0 0 chr13 105594470 105594492 -14689820 + AT_rich Low_complexity Low_complexity 1 22 0 1 1390 232 315 26 43 chr13 105595470 105595586 -14688726 - MIRb SINE MIR -43 225 112 1 1390 234 0 0 0 chr13 105596258 105596284 -14688028 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1 1390 707 152 79 8 chr13 105596294 105596420 -14687892 + B1_Mur3 SINE Alu 1 135 -14 1 1390 21 71 0 0 chr13 105598138 105598180 -14686132 + AT_rich Low_complexity Low_complexity 1 42 0 1 1390 658 321 18 66 chr13 105598196 105598423 -14685889 + MER20 DNA MER1_type 1 216 -3 1 1390 28 0 0 0 chr13 105598603 105598631 -14685681 + AT_rich Low_complexity Low_complexity 1 28 0 1 1390 831 264 50 0 chr13 105599094 105599295 -14685017 - B3 SINE B2 -2 214 4 1 1390 234 306 32 0 chr13 105599966 105600028 -14684284 + MARNA DNA Mariner 319 382 -204 1 1390 1033 126 0 11 chr13 105600288 105600465 -14683847 + (GGAA)n Simple_repeat Simple_repeat 3 177 0 1 1390 380 327 18 0 chr13 105601119 105601229 -14683083 - PB1D10 SINE Alu -4 113 2 1 1390 729 288 109 34 chr13 105601834 105602100 -14682212 - B4A SINE B4 -6 286 1 1 1390 574 285 99 40 chr13 105602119 105602320 -14681992 - ID_B1 SINE B4 -8 216 4 1 1390 779 136 121 0 chr13 105602882 105603014 -14681298 - B1_Mur4 SINE Alu 0 150 3 1 1390 505 260 89 0 chr13 105603296 105603419 -14680893 + B1_Mur2 SINE Alu 3 136 -13 1 1390 551 228 128 8 chr13 105603746 105603989 -14680323 - L1MB8 LINE L1 -13 6165 5894 1 1390 1035 85 14 0 chr13 105603989 105604130 -14680182 + B1_Mus2 SINE Alu 1 143 -4 1 1390 310 327 35 105 chr13 105604164 105604393 -14679919 - Charlie7 DNA MER1_type -1823 789 577 1 1390 205 119 0 48 chr13 105604469 105604531 -14679781 + (TTTG)n Simple_repeat Simple_repeat 1 59 0 1 1390 531 204 8 58 chr13 105604531 105604651 -14679661 - PB1D9 SINE Alu -1 119 6 1 1390 773 201 7 14 chr13 105604666 105604812 -14679500 - B1_Mm SINE Alu -1 146 2 1 1390 245 375 40 45 chr13 105604992 105605168 -14679144 + B4 SINE B4 97 271 -21 1 1390 393 95 0 0 chr13 105605200 105605263 -14679049 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1390 1347 138 37 0 chr13 105605574 105605792 -14678520 - URR1A DNA MER1_type 0 226 1 1 1390 360 0 0 0 chr13 105606306 105606346 -14677966 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1390 216 320 52 98 chr13 105607835 105608008 -14676304 + MIR3 SINE MIR 32 196 -12 1 1390 237 292 211 23 chr13 105608732 105608865 -14675447 - MIR SINE MIR -29 233 76 1 1390 240 184 61 0 chr13 105610138 105610187 -14674125 + MARNA DNA Mariner 11 62 -524 1 1390 243 0 0 0 chr13 105611908 105611935 -14672377 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 1 1390 203 171 24 0 chr13 105612733 105612774 -14671538 + G-rich Low_complexity Low_complexity 6 47 0 1 1390 319 275 0 71 chr13 105612878 105612976 -14671336 + PB1D7 SINE Alu 22 112 -8 1 1390 1054 54 6 93 chr13 105613537 105613699 -14670613 - B1_Mus1 SINE Alu 0 148 1 1 1390 342 0 0 0 chr13 105614211 105614249 -14670063 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1390 404 229 56 19 chr13 105614664 105614771 -14669541 - ID_B1 SINE B4 -13 211 101 1 1390 22 0 0 0 chr13 105614960 105614982 -14669330 + AT_rich Low_complexity Low_complexity 1 22 0 1 1390 1229 41 7 0 chr13 105615501 105615648 -14668664 + B1_Mus1 SINE Alu 1 148 0 1 1390 296 89 0 0 chr13 105616019 105616064 -14668248 + U5 snRNA snRNA 1 45 -71 1 1390 860 206 84 20 chr13 105617430 105617633 -14666679 + B3 SINE B2 1 216 0 1 1390 270 0 0 0 chr13 105617633 105617663 -14666649 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1390 3251 97 48 62 chr13 105617761 105618280 -14666032 - RLTR1B LTR ERV1 0 512 1 1 1390 206 363 10 50 chr13 105618758 105618842 -14665470 + MIR SINE MIR 71 153 -109 1 1390 2209 125 91 0 chr13 105618842 105619203 -14665109 - ORR1B1 LTR MaLR 0 394 1 1 1390 206 363 10 50 chr13 105619203 105619318 -14664994 + MIR SINE MIR 154 262 0 1 1390 317 88 35 0 chr13 105619418 105619475 -14664837 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 1 1390 361 191 36 0 chr13 105619501 105619585 -14664727 - ORR1A3 LTR MaLR 0 326 240 1 1390 665 120 124 33 chr13 105619661 105619782 -14664530 - Lx5 LINE L1 -181 6869 6738 1 1390 308 170 83 32 chr13 105619782 105619938 -14664374 - MTE2b LTR MaLR -39 339 177 1 1390 2923 56 50 8 chr13 105620146 105620526 -14663786 + MTA_Mm LTR MaLR 1 396 0 1 1390 518 286 18 90 chr13 105620598 105620821 -14663491 - B4A SINE B4 -85 207 1 1 1390 429 316 0 0 chr13 105621639 105621756 -14662556 + ID_B1 SINE B4 3 119 -105 1 1390 360 0 0 0 chr13 105621849 105621889 -14662423 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1390 552 281 13 20 chr13 105621891 105622040 -14662272 - RSINE1 SINE B4 -14 151 4 1 1390 553 210 67 18 chr13 105622049 105622214 -14662098 - MTE2b LTR MaLR -206 173 1 1 1390 216 0 0 0 chr13 105622541 105622565 -14661747 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1390 1190 35 0 14 chr13 105622569 105622712 -14661600 - B1_Mus2 SINE Alu -5 142 2 2 1390 325 335 52 5 chr13 105623313 105623505 -14660807 - LTR80B LTR ERVL 0 584 384 2 1390 613 247 47 36 chr13 105623508 105623701 -14660611 + B3A SINE B2 1 195 -3 2 1390 266 50 0 24 chr13 105623974 105624015 -14660297 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2 1390 1149 76 0 0 chr13 105624015 105624160 -14660152 - B1_Mus2 SINE Alu -2 145 1 2 1390 222 288 15 0 chr13 105624335 105624401 -14659911 + GA-rich Low_complexity Low_complexity 1 67 0 2 1390 205 316 12 12 chr13 105625303 105625383 -14658929 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 1390 2236 97 3 64 chr13 105625790 105626132 -14658180 - ORR1A3 LTR MaLR -1 325 5 2 1390 581 205 97 0 chr13 105626132 105626255 -14658057 - Lx9 LINE L1 -18 7626 7486 2 1390 674 53 11 0 chr13 105626255 105626350 -14657962 + (TAGA)n Simple_repeat Simple_repeat 1 96 0 2 1390 581 205 97 0 chr13 105626350 105626411 -14657901 - Lx9 LINE L1 -159 7485 7425 2 1390 1232 41 0 13 chr13 105626688 105626837 -14657475 + B1_Mus1 SINE Alu 2 148 0 2 1390 193 49 98 0 chr13 105626837 105626878 -14657434 + (TAAAAA)n Simple_repeat Simple_repeat 4 48 0 2 1390 195 205 24 24 chr13 105627504 105627589 -14656723 + A-rich Low_complexity Low_complexity 2 86 0 2 1390 4703 39 0 7 chr13 105629393 105629955 -14654357 + L1Md_T LINE L1 6025 6582 0 2 1390 403 299 27 48 chr13 105629962 105630148 -14654164 + B3A SINE B2 1 182 -16 2 1390 2905 199 114 39 chr13 105630959 105631848 -14652464 + RMER17B LTR ERVK 1 955 -3 2 1390 330 24 0 0 chr13 105633323 105633344 -14650968 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1390 1268 27 0 0 chr13 105633344 105633491 -14650821 - B1_Mus2 SINE Alu 0 147 1 2 1390 330 24 0 0 chr13 105633491 105633510 -14650802 + (T)n Simple_repeat Simple_repeat 1 19 0 2 1390 568 118 18 64 chr13 105633663 105633772 -14650540 - B1_Mur4 SINE Alu -36 114 11 2 1390 535 144 30 20 chr13 105633795 105633894 -14650418 + B1_Mur4 SINE Alu 49 148 -2 2 1390 225 0 0 0 chr13 105633904 105633929 -14650383 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1390 296 302 49 28 chr13 105634162 105634305 -14650007 - MER3 DNA MER1_type -42 167 22 2 1390 831 109 94 0 chr13 105634649 105634787 -14649525 - URR1B DNA MER1_type -2 223 73 2 1390 649 200 21 28 chr13 105634799 105634943 -14649369 - URR1B DNA MER1_type -82 143 1 2 1390 236 279 317 0 chr13 105635764 105635868 -14648444 + B1_Mm SINE Alu 4 140 -7 2 1390 2020 133 107 0 chr13 105636557 105636895 -14647417 - Lx LINE L1 -5 6649 6276 2 1390 1073 122 0 0 chr13 105638879 105639027 -14645285 - B1_Mus1 SINE Alu 0 148 1 2 1390 346 135 130 96 chr13 105639053 105639168 -14645144 - PB1D9 SINE Alu -1 119 1 2 1390 450 49 0 0 chr13 105639434 105639495 -14644817 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1390 435 279 9 0 chr13 105639497 105639608 -14644704 - RSINE1 SINE B4 -44 121 10 2 1390 1036 245 131 33 chr13 105639609 105639946 -14644366 - MTD LTR MaLR -14 405 36 2 1390 2511 125 80 19 chr13 105640940 105641364 -14642948 + RLTR11B LTR ERVK 1 450 -3 2 1390 372 22 0 0 chr13 105641406 105641451 -14642861 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1390 406 299 109 33 chr13 105641543 105641805 -14642507 + B4A SINE B4 8 291 -1 2 1390 25 0 0 0 chr13 105641830 105641855 -14642457 + AT_rich Low_complexity Low_complexity 1 25 0 2 1390 792 313 105 13 chr13 105641963 105642335 -14641977 + MLT1A1 LTR MaLR 3 408 0 2 1390 427 249 103 0 chr13 105642579 105642744 -14641568 + L1MC4 LINE L1 7497 7678 -364 2 1390 311 167 33 11 chr13 105643182 105643273 -14641039 + (CAGA)n Simple_repeat Simple_repeat 2 94 0 2 1390 410 233 35 0 chr13 105643286 105643372 -14640940 - B1F SINE Alu -56 93 5 2 1391 1162 68 0 0 chr13 105644587 105644725 -14639587 + B1_Mus1 SINE Alu 1 138 -10 2 1391 347 0 23 0 chr13 105644725 105644768 -14639544 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2 1391 1324 140 93 15 chr13 105644966 105645234 -14639078 + Lx9 LINE L1 7354 7642 -2 2 1391 278 206 0 14 chr13 105645679 105645748 -14638564 + (TATATG)n Simple_repeat Simple_repeat 4 71 0 2 1391 3246 56 5 0 chr13 105646573 105646967 -14637345 + MTA_Mm LTR MaLR 1 396 0 2 1391 23 0 0 0 chr13 105647424 105647447 -14636865 + AT_rich Low_complexity Low_complexity 1 23 0 2 1391 501 17 0 0 chr13 105647531 105647589 -14636723 + (TA)n Simple_repeat Simple_repeat 1 58 0 2 1391 4031 175 148 44 chr13 105648965 105649123 -14635189 - RLTR25A LTR ERVK 0 1103 868 2 1391 2335 95 30 3 chr13 105649123 105649462 -14634850 + L1_Mus3 LINE L1 6289 6636 -2 2 1391 4031 175 148 44 chr13 105649462 105650301 -14634011 - RLTR25A LTR ERVK -236 867 4 2 1391 387 0 0 0 chr13 105652592 105652635 -14631677 + (TC)n Simple_repeat Simple_repeat 1 43 0 2 1391 294 87 0 0 chr13 105652635 105652680 -14631632 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1391 228 35 0 0 chr13 105653098 105653127 -14631185 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1391 456 19 0 0 chr13 105653127 105653179 -14631133 + (GA)n Simple_repeat Simple_repeat 2 54 0 2 1391 633 38 0 0 chr13 105653520 105653600 -14630712 + (CCCTG)n Simple_repeat Simple_repeat 3 82 0 2 1391 608 26 0 0 chr13 105654737 105654814 -14629498 - L1Md_T LINE L1 0 6582 6506 2 1391 1003 286 88 80 chr13 105654855 105655627 -14628685 - L1MEc LINE L1 -5577 823 46 2 1391 589 265 45 139 chr13 105655884 105656129 -14628183 - ID_B1 SINE B4 -2 222 1 2 1391 2598 62 16 0 chr13 105656428 105656750 -14627562 - ORR1A2 LTR MaLR 0 327 1 2 1391 252 154 18 55 chr13 105657240 105657295 -14627017 + PB1D10 SINE Alu 56 108 -9 2 1391 189 107 0 0 chr13 105657400 105657428 -14626884 + (GGA)n Simple_repeat Simple_repeat 2 29 0 2 1391 820 215 150 61 chr13 105657442 105657629 -14626683 + ORR1D1 LTR MaLR 2 177 -197 2 1391 213 39 0 0 chr13 105657629 105657655 -14626657 + (C)n Simple_repeat Simple_repeat 1 26 0 2 1391 820 215 150 61 chr13 105657655 105657794 -14626518 + ORR1D1 LTR MaLR 178 356 -18 2 1391 295 321 0 26 chr13 105657862 105657977 -14626335 + PB1D10 SINE Alu 6 117 0 2 1391 270 0 0 0 chr13 105658211 105658241 -14626071 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 2 1391 907 279 98 37 chr13 105658686 105659092 -14625220 + MER20B DNA MER1_type 220 650 -133 2 1391 505 289 164 62 chr13 105659102 105659456 -14624856 - MLT1B LTR MaLR 0 390 1 2 1391 243 279 23 23 chr13 105659485 105659573 -14624739 + MER20B DNA MER1_type 696 783 0 2 1391 1506 131 123 10 chr13 105659811 105660111 -14624201 + ORR1B1 LTR MaLR 41 374 -20 2 1391 207 0 0 0 chr13 105660322 105660345 -14623967 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1391 201 74 0 0 chr13 105660420 105660447 -14623865 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 1391 315 0 0 0 chr13 105660448 105660483 -14623829 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1391 1783 134 119 6 chr13 105660799 105661144 -14623168 + ORR1B1 LTR MaLR 3 386 -8 2 1391 387 0 0 0 chr13 105661542 105661585 -14622727 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1391 226 318 15 0 chr13 105661585 105661651 -14622661 - RMER15 LTR ERVL -15 560 494 2 1391 331 226 54 0 chr13 105661651 105661744 -14622568 + Lx6 LINE L1 7360 7457 -3 2 1391 522 165 0 42 chr13 105662512 105662632 -14621680 - MER34B-int LTR ERV1 -3247 2109 1995 2 1391 1207 34 14 0 chr13 105663529 105663675 -14620637 + B1_Mus1 SINE Alu 1 148 0 2 1391 276 30 0 0 chr13 105663813 105663846 -14620466 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1391 31 58 0 0 chr13 105663846 105663898 -14620414 + AT_rich Low_complexity Low_complexity 1 52 0 2 1391 269 282 0 0 chr13 105663909 105663993 -14620319 + A-rich Low_complexity Low_complexity 1 84 0 2 1391 2122 186 126 28 chr13 105663993 105664525 -14619787 + RLTR31A_Mm LTR ERVK 1 584 0 2 1391 269 282 0 0 chr13 105664525 105664543 -14619769 + A-rich Low_complexity Low_complexity 85 102 0 2 1391 1370 70 37 0 chr13 105664543 105664730 -14619582 + B2_Mm2 SINE B2 2 195 0 2 1391 1762 264 64 25 chr13 105664731 105665260 -14619052 - Lx7 LINE L1 -377 7319 6770 2 1391 1158 109 81 90 chr13 105665356 105665386 -14618926 - URR1B DNA MER1_type -1 224 182 2 1391 363 44 0 0 chr13 105665386 105665431 -14618881 + (TA)n Simple_repeat Simple_repeat 2 46 0 2 1391 1158 109 81 90 chr13 105665431 105665622 -14618690 - URR1B DNA MER1_type -44 181 6 2 1391 246 150 0 0 chr13 105665973 105666013 -14618299 + URR1B DNA MER1_type 53 92 -133 2 1391 901 227 5 10 chr13 105666223 105666419 -14617893 + B3 SINE B2 10 204 -12 2 1391 411 333 6 58 chr13 105667867 105668039 -14616273 + RSINE1 SINE B4 3 165 0 2 1391 35 0 0 0 chr13 105668290 105668325 -14615987 + AT_rich Low_complexity Low_complexity 1 35 0 2 1391 420 346 27 22 chr13 105668325 105668508 -14615804 - B4A SINE B4 0 292 109 2 1391 3673 164 78 68 chr13 105668517 105669398 -14614914 - RMER19B LTR ERVK -12 890 1 2 1391 1088 242 60 117 chr13 105669531 105669933 -14614379 + MTE2a LTR MaLR 1 379 0 2 1391 1100 61 0 0 chr13 105669961 105670093 -14614219 - B1_Mus1 SINE Alu -16 132 1 2 1391 349 288 66 97 chr13 105670357 105670799 -14613513 + MER97a DNA MER1_type? 456 883 -11 2 1391 2181 129 85 8 chr13 105670985 105671351 -14612961 - ORR1B1 LTR MaLR 0 394 1 2 1391 702 257 133 104 chr13 105671561 105671782 -14612530 + MLT2B1 LTR ERVL 88 301 -219 2 1391 976 197 38 91 chr13 105671782 105672122 -14612190 + RLTRETN_Mm LTR ERVK 1 322 0 2 1391 702 257 133 104 chr13 105672122 105672321 -14611991 + MLT2B1 LTR ERVL 302 520 0 2 1391 228 35 0 0 chr13 105672343 105672372 -14611940 + (TG)n Simple_repeat Simple_repeat 1 29 0 2 1391 691 187 60 0 chr13 105672815 105672949 -14611363 - B1_Mus2 SINE Alu -5 142 1 2 1391 456 19 0 0 chr13 105673689 105673742 -14610570 + (CCCCG)n Simple_repeat Simple_repeat 5 57 0 2 1391 238 311 44 11 chr13 105674078 105674169 -14610143 + Tigger16b DNA Tigger 170 263 -74 3 1391 259 243 109 79 chr13 105674442 105674474 -14609838 - B2_Mm2 SINE B2 -6 189 147 3 1391 426 53 0 0 chr13 105674474 105674531 -14609781 + (TG)n Simple_repeat Simple_repeat 1 57 0 3 1391 259 243 109 79 chr13 105674531 105674663 -14609649 - B2_Mm2 SINE B2 -49 146 20 3 1391 207 0 0 0 chr13 105675526 105675549 -14608763 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1391 293 296 12 0 chr13 105675772 105675853 -14608459 + GA-rich Low_complexity Low_complexity 3 84 0 3 1391 575 309 0 7 chr13 105676556 105676709 -14607603 + RSINE1 SINE B4 2 153 -12 3 1391 351 0 0 0 chr13 105676719 105676758 -14607554 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1391 228 182 0 0 chr13 105676775 105676819 -14607493 + GA-rich Low_complexity Low_complexity 3 46 0 3 1391 280 324 40 40 chr13 105678447 105678595 -14605717 - HAL1 LINE L1 -1591 916 769 3 1391 966 109 287 0 chr13 105678870 105679044 -14605268 - URR1B DNA MER1_type 0 225 2 2 1391 3334 78 40 0 chr13 105679169 105679616 -14604696 - L1_Mus2 LINE L1 0 6566 6102 3 1391 437 254 71 88 chr13 105679957 105680195 -14604117 + RMER2 LTR ERV1 334 567 0 3 1391 470 302 36 36 chr13 105680706 105680926 -14603386 + ID_B1 SINE B4 1 220 -4 3 1391 195 69 0 0 chr13 105680952 105680981 -14603331 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 3 1391 527 285 25 54 chr13 105681203 105681407 -14602905 + B3A SINE B2 1 198 0 3 1391 574 262 41 0 chr13 105681535 105681680 -14602632 + RSINE1 SINE B4 3 153 -12 3 1391 351 0 0 0 chr13 105681692 105681731 -14602581 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1391 242 106 0 21 chr13 105681951 105681999 -14602313 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 3 1391 609 330 208 23 chr13 105682436 105682867 -14601445 + LTR53 LTR ERVL 1 511 -8 3 1391 294 309 56 60 chr13 105682883 105683117 -14601195 - MLT1D LTR MaLR -252 253 21 3 1391 247 312 75 23 chr13 105683591 105683765 -14600547 - MLT2F LTR ERVL 0 663 481 3 1391 331 297 0 0 chr13 105683904 105683978 -14600334 - ID4_ SINE ID -9 74 1 3 1391 622 314 34 67 chr13 105683980 105684419 -14599893 + MLT2B1 LTR ERVL 6 529 -38 3 1391 604 74 21 0 chr13 105684419 105684514 -14599798 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 3 1391 400 339 25 21 chr13 105684514 105684552 -14599760 + MLT2B1 LTR ERVL 530 567 0 3 1391 406 377 51 33 chr13 105684555 105684887 -14599425 - MLT2F LTR ERVL -325 338 1 3 1391 841 279 79 15 chr13 105685215 105685378 -14598934 - MLT1B LTR MaLR 0 390 215 3 1391 1685 135 83 35 chr13 105685378 105685692 -14598620 + ORR1A4 LTR MaLR 1 329 0 3 1391 841 279 79 15 chr13 105685692 105685870 -14598442 - MLT1B LTR MaLR -176 214 27 3 1391 642 272 127 1 chr13 105685888 105686148 -14598164 - MLT1B-int LTR MaLR -69 1666 1437 3 1391 2506 278 96 43 chr13 105686150 105686566 -14597746 + Lx9 LINE L1 6582 7010 -634 3 1391 3422 28 5 0 chr13 105686566 105686957 -14597355 - MTA_Mm LTR MaLR -3 393 1 3 1391 2506 278 96 43 chr13 105686957 105687400 -14596912 + Lx9 LINE L1 7011 7481 -163 3 1391 315 0 0 0 chr13 105687400 105687435 -14596877 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1391 2506 278 96 43 chr13 105687435 105687577 -14596735 + Lx9 LINE L1 7482 7636 -8 3 1391 1336 84 28 0 chr13 105687579 105687758 -14596554 - B2_Mm1t SINE B2 -9 184 1 3 1391 25 0 0 0 chr13 105687761 105687786 -14596526 + AT_rich Low_complexity Low_complexity 1 25 0 3 1391 282 326 210 20 chr13 105687786 105687986 -14596326 - MLT2D LTR ERVL -65 349 112 3 1391 2052 106 26 0 chr13 105688613 105688924 -14595388 + ORR1A2 LTR MaLR 1 319 -8 3 1391 2256 87 9 69 chr13 105689483 105689830 -14594482 - ORR1A3 LTR MaLR 0 326 1 3 1391 374 0 22 0 chr13 105690138 105690184 -14594128 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 3 1391 1162 56 0 0 chr13 105690186 105690329 -14593983 - B1_Mus2 SINE Alu -4 143 1 3 1391 492 310 57 23 chr13 105690528 105690703 -14593609 - MLT1F2 LTR MaLR -8 552 372 3 1391 6840 65 10 88 chr13 105690703 105691548 -14592764 + L1Md_T LINE L1 374 1186 -5538 3 1391 1636 36 0 0 chr13 105691548 105691741 -14592571 + B2_Mm1a SINE B2 1 193 0 3 1391 37551 22 5 2 chr13 105691741 105696174 -14588138 + L1Md_T LINE L1 1187 5586 -297 3 1391 8499 36 1 0 chr13 105696174 105697168 -14587144 + L1Md_T LINE L1 5587 6581 -1 3 1391 383 331 25 13 chr13 105697364 105697550 -14586762 - MLT1F2 LTR MaLR -371 198 12 3 1391 195 114 0 0 chr13 105698683 105698718 -14585594 + (T)n Simple_repeat Simple_repeat 1 35 0 3 1391 279 0 0 0 chr13 105699394 105699425 -14584887 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1391 585 298 6 6 chr13 105701019 105701181 -14583131 + ID_B1 SINE B4 2 163 -61 3 1391 1569 117 0 4 chr13 105701174 105701414 -14582898 - RLTR9E LTR ERVK -170 239 1 3 1391 526 93 0 13 chr13 105701414 105701490 -14582822 - ETnERV2-int LTR ERVK -1 7405 7331 3 1391 1978 171 10 41 chr13 105701702 105702215 -14582097 - ETnERV2-int LTR ERVK -1184 6222 5967 3 1391 553 140 0 27 chr13 105702219 105702329 -14581983 + GA-rich Low_complexity Low_complexity 3 109 0 3 1391 270 0 0 0 chr13 105702327 105702357 -14581955 + (CAG)n Simple_repeat Simple_repeat 2 31 0 3 1391 196 291 84 37 chr13 105702528 105702635 -14581677 + L2c LINE L2 3270 3381 -6 3 1391 190 274 20 0 chr13 105703463 105703565 -14580747 + GA-rich Low_complexity Low_complexity 3 106 0 3 1391 25 51 0 0 chr13 105703944 105703983 -14580329 + AT_rich Low_complexity Low_complexity 1 39 0 3 1391 253 185 31 0 chr13 105704041 105704106 -14580206 + GA-rich Low_complexity Low_complexity 3 69 0 3 1391 330 132 0 0 chr13 105704537 105704590 -14579722 + (TG)n Simple_repeat Simple_repeat 1 53 0 3 1391 228 338 55 7 chr13 105705755 105705901 -14578411 + L1M5 LINE L1 5321 5473 -651 3 1391 1083 181 47 26 chr13 105706403 105706571 -14577741 + ORR1D1 LTR MaLR 1 175 -199 3 1391 4371 68 25 6 chr13 105706571 105707120 -14577192 - LTRIS2 LTR ERV1 0 564 5 3 1391 1083 181 47 26 chr13 105707120 105707184 -14577128 + ORR1D1 LTR MaLR 176 238 -136 3 1391 944 219 69 22 chr13 105707607 105707882 -14576430 + L1_Rod LINE L1 5509 5796 -51 3 1391 255 122 0 0 chr13 105709910 105709959 -14574353 + (T)n Simple_repeat Simple_repeat 1 49 0 3 1391 420 197 72 105 chr13 105709963 105710116 -14574196 - MER57A-int LTR ERV1 -166 6021 5874 3 1391 207 0 0 0 chr13 105710510 105710533 -14573779 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 1391 290 220 17 0 chr13 105711001 105711060 -14573252 + tRNA-Ala-GCG tRNA tRNA 2 61 -14 3 1391 284 295 13 0 chr13 105711060 105711075 -14573237 + ID4 SINE ID 8 82 -1 3 1391 389 162 111 28 chr13 105711186 105711294 -14573018 + RLTR15 LTR ERVK 1 117 -242 3 1391 21 0 0 0 chr13 105711294 105711315 -14572997 + AT_rich Low_complexity Low_complexity 1 21 0 3 1391 268 274 0 88 chr13 105711906 105711960 -14572352 - MLT1I LTR MaLR -240 171 124 3 1391 1639 138 12 81 chr13 105711960 105712306 -14572006 + RLTRETN_Mm LTR ERVK 1 322 0 3 1391 268 274 0 88 chr13 105712306 105712331 -14571981 - MLT1I LTR MaLR -288 123 99 3 1391 423 331 107 47 chr13 105712344 105712616 -14571696 + MLT1D LTR MaLR 18 305 -200 3 1391 327 65 0 0 chr13 105712616 105712662 -14571650 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 3 1391 423 309 84 59 chr13 105712662 105712702 -14571610 + MLT1D LTR MaLR 306 335 -170 3 1391 732 324 68 10 chr13 105712702 105713086 -14571226 + MLT1A1 LTR MaLR 2 407 -1 3 1391 423 309 84 59 chr13 105713086 105713233 -14571079 + MLT1D LTR MaLR 336 499 -6 3 1391 446 292 0 131 chr13 105713483 105713591 -14570721 + PB1 SINE Alu 12 116 -11 3 1391 221 0 35 0 chr13 105713591 105713620 -14570692 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 3 1391 306 292 0 131 chr13 105713620 105713633 -14570679 + PB1D10 SINE Alu 106 117 0 3 1391 1228 61 0 0 chr13 105713948 105714095 -14570217 + B1_Mus2 SINE Alu 1 147 0 3 1391 180 0 0 0 chr13 105714095 105714115 -14570197 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1391 2122 110 74 71 chr13 105714297 105714690 -14569622 + ORR1B1 LTR MaLR 1 394 0 3 1391 1215 48 7 0 chr13 105715454 105715600 -14568712 + B1_Mus1 SINE Alu 2 148 0 3 1391 288 304 15 60 chr13 105715658 105715791 -14568521 - MLT1F1 LTR MaLR -19 550 424 3 1391 282 152 0 0 chr13 105715802 105715861 -14568451 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1391 219 167 0 0 chr13 105716243 105716285 -14568027 + CT-rich Low_complexity Low_complexity 3 44 0 3 1391 222 105 0 0 chr13 105716499 105716537 -14567775 + (A)n Simple_repeat Simple_repeat 1 38 0 3 1391 664 171 84 15 chr13 105716548 105716679 -14567633 + B1_Mus1 SINE Alu 4 143 -5 3 1391 25 31 0 0 chr13 105716905 105716937 -14567375 + AT_rich Low_complexity Low_complexity 1 32 0 3 1391 466 236 13 0 chr13 105717032 105717132 -14567180 + B1_Mm SINE Alu 5 113 -7 3 1391 1057 251 105 10 chr13 105717145 105717439 -14566873 - MTEa LTR MaLR -54 325 4 3 1391 1203 268 60 3 chr13 105717531 105717864 -14566448 - MTE2b LTR MaLR 0 379 28 3 1391 338 379 46 46 chr13 105718039 105718302 -14566010 - L1MC4 LINE L1 -1002 7040 6778 3 1391 3619 50 31 2 chr13 105718305 105718750 -14565562 + L1_Mus1 LINE L1 6105 6562 -5 3 1391 227 73 0 47 chr13 105718783 105718826 -14565486 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 3 1391 270 105 0 0 chr13 105719528 105719566 -14564746 + MLT1M LTR MaLR 240 277 -395 3 1391 1350 67 0 0 chr13 105719900 105720078 -14564234 + (TTCTCC)n Simple_repeat Simple_repeat 3 180 0 3 1391 477 314 34 11 chr13 105720810 105720987 -14563325 + LTR16A1 LTR ERVL 245 425 -31 3 1391 234 160 0 0 chr13 105721864 105721914 -14562398 + (CAGA)n Simple_repeat Simple_repeat 1 50 0 3 1391 304 304 79 14 chr13 105723658 105723798 -14560514 + MLT1A0 LTR MaLR 1 149 -216 3 1391 445 219 10 68 chr13 105723802 105723905 -14560407 + B1_Mur2 SINE Alu 2 98 -51 3 1391 288 252 143 0 chr13 105724003 105724122 -14560190 + MLT1A0 LTR MaLR 239 374 0 3 1391 21 0 0 0 chr13 105725789 105725810 -14558502 + AT_rich Low_complexity Low_complexity 1 21 0 3 1391 2230 88 68 0 chr13 105726535 105726843 -14557469 - ORR1A4 LTR MaLR 0 329 1 3 1391 405 0 0 0 chr13 105727956 105728001 -14556311 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1391 270 0 0 0 chr13 105728033 105728063 -14556249 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 3 1391 216 0 49 49 chr13 105728155 105728196 -14556116 + (CAAAA)n Simple_repeat Simple_repeat 3 43 0 3 1391 487 172 0 51 chr13 105728362 105728460 -14555852 - URR1B DNA MER1_type -132 93 1 3 1391 22 35 0 0 chr13 105729575 105729604 -14554708 + AT_rich Low_complexity Low_complexity 1 29 0 3 1391 977 284 70 57 chr13 105731011 105731170 -14553142 + MER31A LTR ERV1 2 154 -331 3 1391 4280 34 4 4 chr13 105731170 105731676 -14552636 - L1Md_F2 LINE L1 -13 6569 6064 3 1391 977 284 70 57 chr13 105731676 105731990 -14552322 + MER31A LTR ERV1 155 481 -4 3 1391 587 273 14 0 chr13 105733115 105733254 -14551058 + B1F SINE Alu 1 141 -8 3 1391 299 269 45 27 chr13 105733955 105734066 -14550246 + HERV16-int LTR ERVL 1854 1966 -3030 3 1391 260 318 28 9 chr13 105734145 105734253 -14550059 + HERV16-int LTR ERVL 2146 2255 -3502 3 1391 272 353 86 8 chr13 105734917 105735034 -14549278 + PB1 SINE Alu 2 127 0 4 1391 228 143 0 23 chr13 105735042 105735085 -14549227 + ID2 SINE ID 4 45 -38 4 1391 423 56 0 0 chr13 105735772 105735826 -14548486 + (TCCC)n Simple_repeat Simple_repeat 1 54 0 4 1391 22 0 0 0 chr13 105735985 105736007 -14548305 + AT_rich Low_complexity Low_complexity 1 22 0 4 1391 809 208 95 56 chr13 105736008 105736293 -14548019 - L1ME4a LINE L1 -7 6117 5822 4 1391 395 274 59 0 chr13 105736288 105736441 -14547871 - L1ME4a LINE L1 -12 6112 5951 4 1391 246 128 0 0 chr13 105736707 105736746 -14547566 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1391 475 263 95 29 chr13 105736753 105736890 -14547422 - RSINE1 SINE B4 -16 149 4 4 1391 364 190 12 71 chr13 105739964 105740049 -14544263 - MADE2 DNA Mariner 0 80 1 4 1391 843 86 0 0 chr13 105741276 105741393 -14542919 + (TTTC)n Simple_repeat Simple_repeat 3 119 0 4 1391 841 111 15 7 chr13 105742393 105742529 -14541783 - ORR1B2 LTR MaLR 0 367 231 4 1391 2720 40 3 0 chr13 105744179 105744504 -14539808 + L1Md_T LINE L1 6255 6580 -2 4 1391 306 0 0 0 chr13 105745110 105745144 -14539168 + (TTTTTA)n Simple_repeat Simple_repeat 5 38 0 4 1391 1170 61 0 0 chr13 105745144 105745291 -14539021 - B1_Mus1 SINE Alu 0 148 2 4 1391 299 207 0 33 chr13 105745716 105745806 -14538506 + (TA)n Simple_repeat Simple_repeat 2 88 0 4 1391 8125 65 3 7 chr13 105745923 105747207 -14537105 - L1_Mus1 LINE L1 0 6567 5290 4 1391 3544 67 0 11 chr13 105747214 105747665 -14536647 - L1_Mus1 LINE L1 -1 6566 6121 4 1391 2289 113 3 63 chr13 105747665 105748236 -14536076 + L1_Mus1 LINE L1 5656 6134 -433 4 1391 2129 106 3 0 chr13 105748236 105748537 -14535775 - L1_Mm LINE L1 -585 5298 4997 4 1391 263 339 34 17 chr13 105748539 105748656 -14535656 - MER5A DNA MER1_type -69 120 2 4 1391 447 316 126 9 chr13 105748693 105748907 -14535405 + MTE2a LTR MaLR 2 240 -139 4 1391 229 295 130 15 chr13 105748968 105749045 -14535267 + MTE2a LTR MaLR 225 317 -53 4 1391 468 0 0 0 chr13 105749045 105749097 -14535215 + (TTCC)n Simple_repeat Simple_repeat 2 53 0 4 1391 229 295 130 15 chr13 105749097 105749150 -14535162 + MTE2a LTR MaLR 318 369 -1 4 1391 280 297 65 33 chr13 105752007 105752160 -14532152 + Helitron3Na_Mam RC Helitron 7 164 -322 4 1391 214 337 12 12 chr13 105752606 105752690 -14531622 - MIRb SINE MIR -151 117 34 4 1391 540 0 0 0 chr13 105752716 105752776 -14531536 + (CAG)n Simple_repeat Simple_repeat 2 61 0 4 1391 216 0 0 0 chr13 105753128 105753152 -14531160 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 4 1391 236 262 73 158 chr13 105753485 105753637 -14530675 + MIR SINE MIR 32 179 -89 4 1391 292 286 29 0 chr13 105753637 105753707 -14530605 + ID4 SINE ID 1 72 -11 4 1391 198 0 0 0 chr13 105753713 105753735 -14530577 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1391 183 261 71 167 chr13 105753735 105753828 -14530484 + MIRb SINE MIR 186 268 0 4 1391 250 287 138 0 chr13 105754750 105754844 -14529468 - PB1D10 SINE Alu -1 116 10 4 1391 421 289 0 0 chr13 105754928 105755025 -14529287 + RSINE1 SINE B4 52 148 -17 4 1391 405 0 0 0 chr13 105755033 105755078 -14529234 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1391 332 253 32 32 chr13 105755189 105755283 -14529029 + PB1 SINE Alu 32 125 -2 4 1391 809 194 5 0 chr13 105757331 105757555 -14526757 + (TG)n Simple_repeat Simple_repeat 1 225 0 4 1391 258 271 0 0 chr13 105758343 105758450 -14525862 + (TG)n Simple_repeat Simple_repeat 2 108 0 4 1391 186 133 0 0 chr13 105758470 105758500 -14525812 + (TTCTCC)n Simple_repeat Simple_repeat 5 34 0 4 1391 554 265 29 29 chr13 105758536 105758676 -14525636 - B1F SINE Alu 0 149 10 4 1391 252 210 71 47 chr13 105759865 105759950 -14524362 - L1MC4 LINE L1 -134 7908 7822 4 1391 332 333 26 32 chr13 105760007 105760196 -14524116 + B4A SINE B4 103 290 -2 4 1391 250 299 98 79 chr13 105760358 105760497 -14523815 - L1MC4 LINE L1 -282 7760 7619 4 1391 1106 82 0 0 chr13 105760497 105760644 -14523668 - B1_Mus1 SINE Alu -1 147 1 4 1391 250 299 98 79 chr13 105760644 105760882 -14523430 - L1MC4 LINE L1 -424 7618 7376 4 1391 689 252 41 15 chr13 105761007 105761204 -14523108 + B4A SINE B4 15 216 -76 4 1391 297 0 0 0 chr13 105761947 105761980 -14522332 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1391 259 261 68 0 chr13 105762253 105762341 -14521971 + MLT1J2 LTR MaLR 348 441 -7 4 1391 225 328 75 0 chr13 105762510 105762577 -14521735 - L2b LINE L2 0 3375 3304 4 1391 996 111 6 12 chr13 105765040 105765213 -14519099 + (TCCC)n Simple_repeat Simple_repeat 4 175 0 4 1391 274 366 23 0 chr13 105765214 105765345 -14518967 + L2a LINE L2 3293 3426 0 4 1391 225 0 0 0 chr13 105766062 105766087 -14518225 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1391 369 0 0 0 chr13 105766759 105766800 -14517512 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1391 519 45 0 0 chr13 105767281 105767347 -14516965 + (GA)n Simple_repeat Simple_repeat 2 67 0 4 1391 306 212 15 15 chr13 105767390 105767457 -14516855 + ID4_ SINE ID 3 69 -14 4 1391 316 0 45 0 chr13 105767508 105767552 -14516760 + (CAAAA)n Simple_repeat Simple_repeat 2 47 0 4 1391 1156 56 14 0 chr13 105767552 105767696 -14516616 + B1_Mm SINE Alu 2 147 0 4 1391 212 100 0 24 chr13 105767696 105767737 -14516575 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 4 1391 670 141 30 52 chr13 105769098 105769233 -14515079 - B1_Mur3 SINE Alu 0 149 18 4 1391 426 108 0 0 chr13 105769233 105769307 -14515005 + (CCA)n Simple_repeat Simple_repeat 1 74 0 4 1391 538 262 54 5 chr13 105769506 105769690 -14514622 - L1MA4 LINE L1 -394 5906 5714 4 1391 290 265 36 0 chr13 105769685 105769768 -14514544 - L1MD LINE L1 -777 5463 5378 4 1391 653 318 129 0 chr13 105769950 105770183 -14514129 - Lx8 LINE L1 -124 7349 7087 4 1391 318 346 0 29 chr13 105770183 105770287 -14514025 - RSINE1 SINE B4 -63 102 2 4 1391 618 248 279 24 chr13 105770291 105770624 -14513688 - L1MD LINE L1 -1493 4653 4236 4 1391 323 296 0 0 chr13 105770712 105770783 -14513529 + B1F SINE Alu 20 90 -59 4 1391 216 0 0 0 chr13 105770783 105770807 -14513505 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 4 1391 288 0 0 0 chr13 105770878 105770910 -14513402 + (TC)n Simple_repeat Simple_repeat 1 32 0 4 1391 186 71 0 0 chr13 105770912 105770940 -14513372 + (TTAA)n Simple_repeat Simple_repeat 1 28 0 4 1391 1866 177 46 8 chr13 105771137 105771507 -14512805 + ORR1C2 LTR MaLR 1 384 0 4 1391 348 24 0 0 chr13 105774465 105774506 -14509806 + (CACCC)n Simple_repeat Simple_repeat 3 43 0 4 1391 188 100 25 0 chr13 105774528 105774568 -14509744 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1392 420 277 38 8 chr13 105775541 105775672 -14508640 - ID_B1 SINE B4 -13 211 77 4 1392 234 191 28 56 chr13 105775742 105775814 -14508498 + A-rich Low_complexity Low_complexity 3 72 0 4 1392 1226 314 118 20 chr13 105776395 105777227 -14507085 + L1ME2z LINE L1 5454 6366 -78 4 1392 1132 122 128 34 chr13 105778777 105778981 -14505331 - URR1A DNA MER1_type -3 223 1 4 1392 439 292 6 6 chr13 105779518 105779697 -14504615 + (TA)n Simple_repeat Simple_repeat 1 179 0 4 1392 22 0 0 0 chr13 105780503 105780525 -14503787 + AT_rich Low_complexity Low_complexity 1 22 0 4 1392 729 229 31 25 chr13 105780606 105780767 -14503545 + RSINE1 SINE B4 4 165 0 4 1392 2707 84 41 53 chr13 105781299 105781715 -14502597 - IAPLTR2a LTR ERVK 0 411 1 4 1392 26997 12 2 0 chr13 105781715 105784665 -14499647 - IAPEz-int LTR ERVK 0 6481 3525 4 1392 955 80 24 0 chr13 105784665 105784790 -14499522 - IAPEz-int LTR ERVK -2770 4910 4783 4 1392 1917 86 4 0 chr13 105784785 105785030 -14499282 - IAPEz-int LTR ERVK -5183 2497 2252 4 1392 11993 36 20 28 chr13 105785031 105786511 -14497801 - IAPEz-int LTR ERVK -5004 1477 9 4 1392 2682 81 68 40 chr13 105786512 105786912 -14497400 - IAPLTR2a LTR ERVK 0 411 1 4 1392 206 283 129 11 chr13 105786985 105787078 -14497234 + MIRb SINE MIR 117 220 -48 4 1392 184 30 61 0 chr13 105787317 105787350 -14496962 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1392 295 330 11 11 chr13 105787358 105787453 -14496859 + Tigger5 DNA MER2_type 146 240 -2166 4 1392 313 310 40 0 chr13 105787466 105787566 -14496746 + Tigger5 DNA MER2_type 2303 2406 0 4 1392 242 313 27 107 chr13 105790442 105790592 -14493720 - MER5A DNA MER1_type -4 185 48 4 1392 791 270 91 58 chr13 105790756 105790964 -14493348 - B4A SINE B4 -4 288 73 4 1392 384 22 0 0 chr13 105790964 105791009 -14493303 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1392 791 270 91 58 chr13 105791009 105791075 -14493237 - B4A SINE B4 -220 72 5 4 1392 213 189 0 0 chr13 105791303 105791340 -14492972 + G-rich Low_complexity Low_complexity 4 40 0 4 1392 22 0 0 0 chr13 105791365 105791387 -14492925 + AT_rich Low_complexity Low_complexity 1 22 0 4 1392 606 252 14 48 chr13 105792995 105793141 -14491171 - RSINE1 SINE B4 0 165 25 4 1392 468 91 0 0 chr13 105793194 105793260 -14491052 + (TC)n Simple_repeat Simple_repeat 2 67 0 4 1392 254 271 49 9 chr13 105793967 105794114 -14490198 + L1M5 LINE L1 5330 5482 -758 4 1392 308 312 64 19 chr13 105794836 105794993 -14489319 - L1MEd LINE L1 -4994 1125 962 4 1392 186 209 0 0 chr13 105795367 105795410 -14488902 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 4 1392 448 311 8 16 chr13 105795415 105795536 -14488776 - ID_B1 SINE B4 -40 184 65 4 1392 320 313 29 64 chr13 105795561 105795701 -14488611 - L1MEd LINE L1 -4978 1141 1007 4 1392 441 252 20 0 chr13 105795999 105796098 -14488214 - PB1D10 SINE Alu -13 104 4 4 1392 1164 75 0 7 chr13 105796251 105796398 -14487914 + B1_Mus2 SINE Alu 2 147 0 4 1392 317 24 24 0 chr13 105796404 105796446 -14487866 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 4 1392 498 298 38 0 chr13 105797656 105797787 -14486525 - B1F2 SINE Alu -13 136 1 4 1392 25 51 0 0 chr13 105797923 105797962 -14486350 + AT_rich Low_complexity Low_complexity 1 39 0 4 1392 2116 174 75 1 chr13 105798450 105798926 -14485386 + Lx3C LINE L1 6375 6993 -7 4 1392 331 278 73 80 chr13 105799700 105799837 -14484475 + MLT1B LTR MaLR 239 374 -16 4 1392 22 35 0 0 chr13 105800113 105800142 -14484170 + AT_rich Low_complexity Low_complexity 1 29 0 4 1392 271 289 13 0 chr13 105800836 105800912 -14483400 - L1M5 LINE L1 -457 5667 5591 4 1392 537 58 0 0 chr13 105801344 105801413 -14482899 + (CCAA)n Simple_repeat Simple_repeat 2 70 0 4 1392 525 251 121 10 chr13 105802638 105802851 -14481461 + L1M5 LINE L1 5566 5794 -395 4 1392 5726 44 53 0 chr13 105802851 105803527 -14480785 + L1Md_F2 LINE L1 5870 6581 -1 5 1392 227 203 235 8 chr13 105803527 105803561 -14480751 + L1M5 LINE L1 5795 5848 -341 4 1392 241 325 47 16 chr13 105803574 105803702 -14480610 + L1ME3 LINE L1 5901 6032 -130 5 1392 1011 112 0 0 chr13 105805291 105805443 -14478869 + (TTCC)n Simple_repeat Simple_repeat 4 155 0 5 1392 322 268 28 0 chr13 105805445 105805516 -14478796 - ID4_ SINE ID -10 73 1 5 1392 1139 122 5 21 chr13 105805565 105805758 -14478554 + B2_Mm2 SINE B2 6 195 0 5 1392 484 300 54 124 chr13 105805936 105806267 -14478045 + LTR80B LTR ERVL 121 428 -156 5 1392 22 94 0 0 chr13 105806455 105806519 -14477793 + AT_rich Low_complexity Low_complexity 1 64 0 5 1392 369 237 93 0 chr13 105807887 105807984 -14476328 - B1F SINE Alu -42 107 2 5 1392 225 307 111 26 chr13 105807984 105808004 -14476308 - B4 SINE B4 -96 196 70 5 1392 1477 82 16 0 chr13 105808045 105808228 -14476084 - B2_Mm2 SINE B2 -8 187 2 5 1392 507 125 9 19 chr13 105808486 105808592 -14475720 + (TA)n Simple_repeat Simple_repeat 2 106 0 5 1392 1011 156 14 70 chr13 105808628 105808710 -14475602 + RMER4A LTR ERVK 264 345 -121 5 1392 561 68 0 0 chr13 105808710 105808784 -14475528 + (TC)n Simple_repeat Simple_repeat 1 74 0 5 1392 1011 156 14 70 chr13 105808784 105808915 -14475397 + RMER4A LTR ERVK 346 465 -1 5 1392 1607 272 171 62 chr13 105808917 105809903 -14474409 - L1M2 LINE L1 -690 5622 4452 5 1392 1141 222 14 0 chr13 105809903 105810115 -14474197 - B3 SINE B2 0 216 2 5 1392 1607 284 88 61 chr13 105810115 105810341 -14473971 - L1M2 LINE L1 -1692 4451 4234 5 1392 638 206 33 60 chr13 105810341 105810491 -14473821 - B1_Mur1 SINE Alu -2 147 2 5 1392 1607 284 88 61 chr13 105810491 105810587 -14473725 - L1M2 LINE L1 -1910 4233 4140 5 1392 502 317 8 0 chr13 105810589 105810712 -14473600 - 7SLRNA srpRNA srpRNA -30 284 161 5 1392 432 283 77 28 chr13 105810788 105811035 -14473277 + L1M5 LINE L1 5024 5282 -864 5 1392 518 220 147 0 chr13 105811042 105811071 -14473241 + B1_Mur4 SINE Alu 11 39 -111 5 1392 522 0 0 0 chr13 105811071 105811129 -14473183 + (CAGAGA)n Simple_repeat Simple_repeat 6 63 0 5 1392 518 220 147 0 chr13 105811129 105811208 -14473104 + B1_Mur4 SINE Alu 40 133 -17 5 1392 183 320 168 43 chr13 105811718 105811927 -14472385 - L4 LINE RTE -442 1587 1353 5 1392 627 289 109 15 chr13 105812048 105812315 -14471997 - Tigger13a DNA MER2_type -130 641 350 5 1392 320 242 207 57 chr13 105812386 105812526 -14471786 - Tigger13a DNA MER2_type -551 220 60 5 1392 245 299 15 0 chr13 105813296 105813363 -14470949 - L4 LINE RTE -1352 677 610 5 1392 365 329 94 101 chr13 105813859 105813978 -14470334 + L2c LINE L2 1973 2093 -1326 5 1392 557 254 165 46 chr13 105813978 105814172 -14470140 - ID_B1 SINE B4 -5 219 3 5 1392 365 329 94 101 chr13 105814172 105814652 -14469660 + L2c LINE L2 2094 2566 -853 5 1392 342 0 0 0 chr13 105814652 105814690 -14469622 + (TTCC)n Simple_repeat Simple_repeat 4 41 0 5 1392 365 329 94 101 chr13 105814690 105814762 -14469550 + L2c LINE L2 2567 2640 -779 5 1392 271 326 124 39 chr13 105814855 105815352 -14468960 + L2c LINE L2 2846 3385 -2 5 1392 812 151 166 65 chr13 105816188 105816215 -14468097 - URR1B DNA MER1_type -6 219 199 5 1392 4732 137 34 15 chr13 105816215 105816957 -14467355 - RMER6A LTR ERVK 0 756 1 5 1392 812 151 166 65 chr13 105816957 105817128 -14467184 - URR1B DNA MER1_type -27 198 1 5 1392 1081 257 22 69 chr13 105817483 105817843 -14466469 + Lx9 LINE L1 7057 7399 -245 5 1392 195 42 0 0 chr13 105817852 105817876 -14466436 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1392 25 0 0 0 chr13 105817993 105818018 -14466294 + AT_rich Low_complexity Low_complexity 1 25 0 5 1392 547 287 0 0 chr13 105818027 105818142 -14466170 + PB1D7 SINE Alu 6 120 0 5 1392 234 182 0 0 chr13 105818796 105818862 -14465450 + (TG)n Simple_repeat Simple_repeat 1 66 0 5 1392 26 50 0 0 chr13 105819465 105819505 -14464807 + AT_rich Low_complexity Low_complexity 1 40 0 5 1392 229 200 0 0 chr13 105819710 105819755 -14464557 + CT-rich Low_complexity Low_complexity 2 46 0 5 1392 399 326 53 20 chr13 105820240 105820390 -14463922 + MIRc SINE MIR 6 160 -108 5 1392 278 330 19 37 chr13 105821288 105821395 -14462917 + MER5B DNA MER1_type 10 114 -64 5 1392 227 200 15 15 chr13 105821642 105821661 -14462651 - IAPLTR2_Mm LTR ERVK -189 286 269 5 1392 252 59 0 0 chr13 105821661 105821695 -14462617 + (TG)n Simple_repeat Simple_repeat 2 35 0 5 1392 227 200 15 15 chr13 105821695 105821741 -14462571 - IAPLTR2_Mm LTR ERVK -207 268 222 5 1392 246 32 0 0 chr13 105821741 105821772 -14462540 + (GA)n Simple_repeat Simple_repeat 1 31 0 5 1392 403 250 43 0 chr13 105821775 105821867 -14462445 - B4 SINE B4 -194 98 3 5 1392 662 154 85 8 chr13 105822104 105822222 -14462090 + B3 SINE B2 4 130 -86 5 1392 21 0 0 0 chr13 105822262 105822283 -14462029 + AT_rich Low_complexity Low_complexity 1 21 0 5 1392 198 402 82 22 chr13 105822430 105822613 -14461699 - MIRb SINE MIR 0 268 75 5 1392 209 108 27 0 chr13 105823343 105823380 -14460932 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1392 642 11 11 22 chr13 105823390 105823479 -14460833 + (TCTA)n Simple_repeat Simple_repeat 1 88 0 5 1392 22 35 0 0 chr13 105823518 105823547 -14460765 + AT_rich Low_complexity Low_complexity 1 29 0 5 1392 261 340 31 0 chr13 105823850 105823947 -14460365 - MER5B DNA MER1_type -68 110 11 5 1392 259 271 87 15 chr13 105825094 105825197 -14459115 + MIRb SINE MIR 112 226 -42 5 1392 1408 143 4 39 chr13 105826099 105826332 -14457980 + URR1B DNA MER1_type 1 225 0 5 1392 651 274 98 22 chr13 105827326 105827509 -14456803 - B3A SINE B2 0 198 2 5 1392 243 307 56 35 chr13 105827535 105827677 -14456635 + B1F1 SINE Alu 1 145 -4 5 1392 291 276 40 0 chr13 105827684 105827760 -14456552 + ID SINE ID 5 83 -141 5 1392 313 255 8 17 chr13 105827760 105827792 -14456520 + ID4 SINE ID 5 110 -42 5 1392 246 62 0 0 chr13 105829341 105829373 -14454939 + (TA)n Simple_repeat Simple_repeat 2 33 0 5 1392 415 305 57 0 chr13 105830626 105830731 -14453581 + PB1 SINE Alu 4 114 -13 5 1392 345 272 261 100 chr13 105831182 105831431 -14452881 + B4 SINE B4 1 289 -3 5 1392 309 148 24 12 chr13 105831446 105831528 -14452784 + (CA)n Simple_repeat Simple_repeat 1 83 0 5 1392 2045 140 74 3 chr13 105832063 105832400 -14451912 - Lx LINE L1 0 6654 6294 5 1392 725 122 209 0 chr13 105832694 105832809 -14451503 + B1_Mus2 SINE Alu 2 140 -7 5 1392 22 56 0 0 chr13 105833518 105833554 -14450758 + AT_rich Low_complexity Low_complexity 1 36 0 5 1392 393 58 0 0 chr13 105833871 105833923 -14450389 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1392 340 320 8 8 chr13 105834009 105834132 -14450180 + MER5B DNA MER1_type 52 174 -4 5 1392 252 0 0 0 chr13 105834243 105834271 -14450041 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1392 360 0 0 0 chr13 105834992 105835032 -14449280 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1392 583 307 71 36 chr13 105835038 105835318 -14448994 + B4A SINE B4 1 290 -2 5 1392 278 312 45 0 chr13 105836050 105836143 -14448169 + B1F1 SINE Alu 1 98 -51 5 1392 252 77 0 0 chr13 105836143 105836182 -14448130 + (CAAT)n Simple_repeat Simple_repeat 1 39 0 5 1392 278 312 45 0 chr13 105836182 105836200 -14448112 + B1F1 SINE Alu 99 116 -33 5 1392 1230 255 94 36 chr13 105836580 105836995 -14447317 + MLT1C LTR MaLR 9 447 -20 5 1392 360 148 0 0 chr13 105838017 105838078 -14446234 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 5 1392 1072 58 58 0 chr13 105838078 105838217 -14446095 - B1_Mus2 SINE Alu 0 147 1 5 1392 22 0 0 0 chr13 105838320 105838342 -14445970 + AT_rich Low_complexity Low_complexity 1 22 0 5 1392 215 305 76 118 chr13 105838595 105838714 -14445598 - MIRb SINE MIR -152 116 3 5 1392 629 217 3 3 chr13 105839388 105839687 -14444625 + (CA)n Simple_repeat Simple_repeat 1 299 0 5 1392 363 251 98 62 chr13 105840502 105840755 -14443557 - L1MB8 LINE L1 -69 6115 5838 5 1392 330 67 0 0 chr13 105842812 105842857 -14441455 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 5 1392 296 48 24 0 chr13 105843579 105843621 -14440691 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 5 1392 23 0 0 0 chr13 105844331 105844354 -14439958 + GC_rich Low_complexity Low_complexity 1 23 0 5 1392 317 271 128 7 chr13 105846083 105846224 -14438088 + MER21B LTR ERV1 153 310 -553 5 1392 1360 275 106 12 chr13 105846355 105846922 -14437390 - Lx8 LINE L1 -4 7469 6850 5 1392 2243 154 148 15 chr13 105846923 105847390 -14436922 + RLTR24 LTR ERV1 1 529 0 5 1392 1551 289 96 29 chr13 105847397 105848077 -14436235 - Lx8 LINE L1 -628 6845 6121 5 1392 29 0 0 0 chr13 105848112 105848141 -14436171 + AT_rich Low_complexity Low_complexity 1 29 0 5 1392 604 265 7 29 chr13 105848156 105848296 -14436016 - RSINE1 SINE B4 -27 138 2 5 1392 382 332 108 45 chr13 105848303 105848637 -14435675 + MER21B LTR ERV1 426 780 -83 5 1392 23 54 0 0 chr13 105850267 105850304 -14434008 + AT_rich Low_complexity Low_complexity 1 37 0 5 1392 373 223 47 62 chr13 105851725 105851854 -14432458 - MER34 LTR ERV1 -47 495 369 5 1392 389 286 0 0 chr13 105852016 105852093 -14432219 + ID4 SINE ID 6 82 -1 5 1392 274 253 84 48 chr13 105852172 105852255 -14432057 + B1F1 SINE Alu 1 86 -63 5 1392 803 125 0 7 chr13 105852297 105852434 -14431878 + (GGAA)n Simple_repeat Simple_repeat 1 136 0 5 1392 254 282 0 53 chr13 105852475 105852550 -14431762 + B1_Mm SINE Alu 64 134 -13 5 1392 473 174 35 0 chr13 105853010 105853096 -14431216 + B3A SINE B2 2 90 -108 5 1392 3344 150 43 55 chr13 105853111 105853761 -14430551 + RLTR26 LTR ERVK 1 642 0 5 1392 390 211 33 11 chr13 105853764 105853855 -14430457 + B3 SINE B2 124 216 0 5 1392 604 142 166 28 chr13 105853952 105854097 -14430215 - Lx2 LINE L1 -166 6831 6667 5 1392 797 155 0 7 chr13 105854849 105854998 -14429314 + CT-rich Low_complexity Low_complexity 3 150 0 5 1392 189 0 0 0 chr13 105855336 105855357 -14428955 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1392 201 235 72 14 chr13 105855972 105856041 -14428271 + L2c LINE L2 3284 3356 -31 5 1392 335 256 88 4 chr13 105856076 105856224 -14428088 - L1MC4a LINE L1 0 7995 7760 5 1392 225 0 0 0 chr13 105856431 105856456 -14427856 + (TC)n Simple_repeat Simple_repeat 2 26 0 5 1392 198 0 0 0 chr13 105856456 105856477 -14427835 + (TG)n Simple_repeat Simple_repeat 1 22 0 5 1392 423 0 0 0 chr13 105856477 105856523 -14427789 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 1392 1759 299 70 9 chr13 105856758 105857220 -14427092 + Lx8 LINE L1 6479 6952 -521 5 1392 270 0 0 0 chr13 105857220 105857250 -14427062 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 1392 428 0 19 0 chr13 105857250 105857301 -14427011 + (CA)n Simple_repeat Simple_repeat 1 53 0 5 1392 1759 299 70 9 chr13 105857301 105857511 -14426801 + Lx8 LINE L1 6953 7192 -281 5 1392 1232 139 55 9 chr13 105857522 105857740 -14426572 - RLTR13D3 LTR ERVK -359 755 528 6 1392 901 156 85 26 chr13 105857720 105857956 -14426356 - RLTR13D3 LTR ERVK -559 247 1 6 1392 478 192 26 8 chr13 105858055 105858185 -14426127 - L1MA8 LINE L1 -150 6141 6001 6 1392 306 0 0 0 chr13 105859643 105859677 -14424635 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 6 1392 369 0 0 0 chr13 105859938 105859979 -14424333 + (TTAG)n Simple_repeat Simple_repeat 3 43 0 6 1392 5734 76 18 3 chr13 105859990 105860755 -14423557 - L1_Mus3 LINE L1 0 6638 5862 6 1392 5327 95 5 8 chr13 105860749 105861510 -14422802 - L1_Mus3 LINE L1 -2 6636 5878 6 1392 1030 45 8 0 chr13 105861537 105861670 -14422642 - B1_Mm SINE Alu 0 147 14 6 1392 24 0 0 0 chr13 105861932 105861956 -14422356 + AT_rich Low_complexity Low_complexity 1 24 0 6 1392 413 66 16 0 chr13 105862479 105862540 -14421772 + (GA)n Simple_repeat Simple_repeat 2 63 0 6 1392 3786 80 25 4 chr13 105863062 105863579 -14420733 - L1_Mus3 LINE L1 -4 6634 6107 6 1392 274 43 130 0 chr13 105863619 105863688 -14420624 + A-rich Low_complexity Low_complexity 2 79 0 6 1392 182 268 24 0 chr13 105863766 105863807 -14420505 + L2 LINE L2 2709 2750 -669 6 1392 26 64 0 0 chr13 105863847 105863894 -14420418 + AT_rich Low_complexity Low_complexity 1 47 0 6 1392 299 286 32 74 chr13 105864454 105864643 -14419669 + L1M6 LINE L1 1485 1665 -4831 6 1392 17468 53 0 0 chr13 105865372 105867662 -14416650 + L1Md_F2 LINE L1 3296 5586 -297 6 1392 7817 46 26 4 chr13 105867662 105868637 -14415675 + L1Md_F2 LINE L1 5587 6582 0 6 1392 482 292 61 40 chr13 105868735 105869110 -14415202 - L1M4 LINE L1 -1497 4649 4267 6 1392 6377 110 52 0 chr13 105869136 105870089 -14414223 - Lx2 LINE L1 0 6997 5995 6 1392 23 0 0 0 chr13 105870277 105870300 -14414012 + AT_rich Low_complexity Low_complexity 1 23 0 6 1392 423 277 174 10 chr13 105870300 105870619 -14413693 - L1_Mur3 LINE L1 -605 5551 5184 6 1392 258 105 0 0 chr13 105871391 105871429 -14412883 + (CAAG)n Simple_repeat Simple_repeat 2 39 0 6 1392 21 0 0 0 chr13 105871839 105871860 -14412452 + AT_rich Low_complexity Low_complexity 1 21 0 6 1392 819 310 67 62 chr13 105874116 105874472 -14409840 + MTEa LTR MaLR 1 371 -8 6 1392 653 310 65 23 chr13 105874725 105875075 -14409237 - L1MC3 LINE L1 -20 7765 7398 6 1392 294 29 0 0 chr13 105875075 105875110 -14409202 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 6 1392 653 310 65 23 chr13 105875110 105875121 -14409191 - L1MC3 LINE L1 -388 7397 7384 6 1392 497 111 0 0 chr13 105875121 105875202 -14409110 - L1Md_F2 LINE L1 0 6582 6502 6 1392 653 310 65 23 chr13 105875202 105875225 -14409087 - L1MC3 LINE L1 -402 7383 7364 6 1392 435 143 15 15 chr13 105875226 105875361 -14408951 + (TCTA)n Simple_repeat Simple_repeat 3 137 0 6 1392 271 294 112 59 chr13 105875677 105875829 -14408483 - MLT1B LTR MaLR 0 390 231 6 1392 237 264 129 21 chr13 105875804 105875897 -14408415 - MLT1B LTR MaLR -161 306 204 6 1392 226 286 11 32 chr13 105875904 105875998 -14408314 + C-rich Low_complexity Low_complexity 2 93 0 6 1392 233 200 33 0 chr13 105876188 105876248 -14408064 + T-rich Low_complexity Low_complexity 2 63 0 6 1392 465 378 45 100 chr13 105876897 105877128 -14407184 - L2a LINE L2 -42 3384 3173 6 1392 830 222 6 6 chr13 105877128 105877291 -14407021 + RSINE1 SINE B4 3 165 0 6 1392 465 378 45 100 chr13 105877291 105877500 -14406812 - L2a LINE L2 -254 3172 2968 6 1392 601 310 131 28 chr13 105877656 105878048 -14406264 + Charlie1 DNA MER1_type 2221 2516 -265 6 1392 197 280 119 63 chr13 105878283 105878409 -14405903 + L2 LINE L2 2301 2433 -986 6 1392 843 250 36 0 chr13 105878589 105878781 -14405531 - B3 SINE B2 -16 200 2 6 1392 325 302 70 23 chr13 105878793 105878922 -14405390 - MER5A DNA MER1_type -22 167 33 6 1392 937 291 89 7 chr13 105879389 105879829 -14404483 - L1ME3A LINE L1 -336 5837 5362 6 1392 210 119 48 0 chr13 105879839 105879881 -14404431 + T-rich Low_complexity Low_complexity 2 45 0 6 1392 266 169 152 33 chr13 105879884 105879919 -14404393 - B1F1 SINE Alu 0 120 5 6 1392 247 250 0 18 chr13 105879919 105879976 -14404336 - B4 SINE B4 -147 145 90 6 1392 338 313 48 22 chr13 105880027 105880295 -14404017 - L1ME3A LINE L1 -855 5291 5017 6 1392 444 256 40 119 chr13 105880392 105880569 -14403743 - RSINE1 SINE B4 0 165 3 6 1392 262 375 11 67 chr13 105880663 105880843 -14403469 + RMER4A LTR ERVK 22 191 -275 6 1392 227 214 0 0 chr13 105881160 105881202 -14403110 - L1ME3A LINE L1 -1286 4860 4819 6 1392 392 265 264 13 chr13 105881452 105881979 -14402333 - L1ME3A LINE L1 -2335 3811 3153 6 1392 30 0 0 0 chr13 105882068 105882098 -14402214 + AT_rich Low_complexity Low_complexity 1 30 0 6 1392 580 238 63 8 chr13 105882130 105882257 -14402055 - B1_Mur1 SINE Alu -15 134 1 6 1392 782 206 157 5 chr13 105882278 105882463 -14401849 - B3 SINE B2 -3 213 1 6 1392 483 130 0 0 chr13 105882637 105882714 -14401598 + (TA)n Simple_repeat Simple_repeat 2 78 0 6 1392 272 113 324 0 chr13 105882714 105882785 -14401527 - Lx9 LINE L1 -168 7476 7383 6 1392 3389 216 30 30 chr13 105882849 105883787 -14400525 + L1_Rod LINE L1 3796 4733 -1114 6 1392 478 268 24 0 chr13 105883839 105883962 -14400350 - Lx8 LINE L1 -432 7041 6916 6 1392 748 286 129 36 chr13 105883972 105884562 -14399750 - L1_Mur3 LINE L1 -1524 4356 3712 6 1392 351 198 82 46 chr13 105884563 105884726 -14399586 - L1M4c LINE L1 -2476 3903 3712 6 1392 365 236 106 14 chr13 105884838 105884980 -14399332 - L1M4c LINE L1 -2716 3663 3509 6 1392 259 0 98 0 chr13 105885392 105885433 -14398879 + (TTTTTA)n Simple_repeat Simple_repeat 2 46 0 6 1392 4959 39 2 0 chr13 105885439 105886028 -14398284 - L1Md_T LINE L1 -1 6581 5992 6 1392 375 319 78 88 chr13 105886148 105886408 -14397904 - L1M4c LINE L1 -3321 3058 2822 6 1392 655 275 65 21 chr13 105886408 105886687 -14397625 - B4A SINE B4 0 292 2 6 1392 375 319 78 88 chr13 105886687 105887130 -14397182 - L1M4c LINE L1 -3558 2821 2362 6 1392 409 352 65 57 chr13 105887173 105887574 -14396738 - L1M4c LINE L1 -4544 1840 1437 6 1392 579 192 0 0 chr13 105888071 105888167 -14396145 + T-rich Low_complexity Low_complexity 35 130 0 6 1392 1166 69 0 0 chr13 105888167 105888312 -14396000 - B1_Mm SINE Alu 0 147 3 6 1392 579 192 0 0 chr13 105888312 105888345 -14395967 + T-rich Low_complexity Low_complexity 2 34 0 6 1392 326 240 87 40 chr13 105888633 105888759 -14395553 + L1MEa LINE L1 870 1001 -5069 6 1392 207 69 0 0 chr13 105888759 105888788 -14395524 + (GA)n Simple_repeat Simple_repeat 1 29 0 6 1392 1903 113 69 3 chr13 105888983 105889286 -14395026 - Lx4A LINE L1 -1 7057 6735 6 1392 5341 92 12 10 chr13 105889401 105890179 -14394133 - Lx3_Mus LINE L1 0 7009 6231 6 1392 234 18 52 52 chr13 105890253 105890311 -14394001 + (TTTG)n Simple_repeat Simple_repeat 2 59 0 6 1392 516 272 0 22 chr13 105890971 105891110 -14393202 + B1F SINE Alu 2 137 -12 6 1392 25 0 0 0 chr13 105891188 105891213 -14393099 + AT_rich Low_complexity Low_complexity 1 25 0 6 1392 428 126 53 0 chr13 105891685 105891780 -14392532 - L1MB3 LINE L1 0 6183 6084 6 1392 324 0 0 0 chr13 105891882 105891918 -14392394 + (TTA)n Simple_repeat Simple_repeat 1 36 0 6 1392 411 360 35 45 chr13 105892086 105892284 -14392028 - MTD LTR MaLR -206 213 18 6 1392 326 224 85 17 chr13 105892556 105892674 -14391638 + MER33 DNA MER1_type 36 161 -163 6 1392 533 313 133 31 chr13 105892757 105893050 -14391262 - LTR33 LTR ERVL -170 345 23 6 1392 3163 39 29 3 chr13 105893076 105893462 -14390850 + MTA_Mm LTR MaLR 1 396 0 6 1392 321 26 0 0 chr13 105893796 105893834 -14390478 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1392 268 151 48 152 chr13 105893838 105893963 -14390349 + Lx9 LINE L1 7531 7642 -2 6 1392 2025 200 43 14 chr13 105894051 105894492 -14389820 + Lx6 LINE L1 7003 7456 -4 6 1392 365 274 150 18 chr13 105894862 105895029 -14389283 + B3A SINE B2 1 189 -9 6 1392 30 77 0 0 chr13 105895333 105895398 -14388914 + AT_rich Low_complexity Low_complexity 1 65 0 6 1392 824 266 85 70 chr13 105895699 105896168 -14388144 - L1MA7 LINE L1 -313 5978 5503 6 1392 257 287 167 10 chr13 105896203 105896305 -14388007 + L2a LINE L2 3283 3400 -26 6 1392 951 275 73 47 chr13 105896336 105896679 -14387633 - MTEa LTR MaLR -12 367 16 6 1392 656 257 37 124 chr13 105896949 105897320 -14386992 - L1MC LINE L1 -1257 4889 4518 6 1392 180 97 0 0 chr13 105897320 105897351 -14386961 + (TCTCTG)n Simple_repeat Simple_repeat 6 36 0 6 1392 656 257 37 124 chr13 105897351 105897624 -14386688 - L1MC LINE L1 -1629 4517 4301 6 1392 1134 58 0 0 chr13 105897653 105897790 -14386522 - B1_Mus1 SINE Alu -10 138 2 6 1392 230 308 81 49 chr13 105898135 105898258 -14386054 - LTR34 LTR ERV1 -408 291 165 6 1392 384 287 73 8 chr13 105898728 105898851 -14385461 - B1F1 SINE Alu -7 142 12 6 1392 351 308 50 43 chr13 105898851 105898867 -14385445 - ID_B1 SINE B4 -7 217 78 6 1392 686 276 119 24 chr13 105903175 105903523 -14380789 - L1MB8 LINE L1 -26 6152 5763 6 1392 4200 40 6 2 chr13 105903523 105904024 -14380288 - RLTR1C LTR ERV1 0 503 1 6 1392 686 281 81 27 chr13 105904024 105904430 -14379882 - L1MB8 LINE L1 -2233 5762 5305 6 1392 480 231 162 10 chr13 105904496 105904693 -14379619 + L1MA8 LINE L1 5961 6187 -104 6 1392 1600 184 71 124 chr13 105904970 105905404 -14378908 - MTD LTR MaLR -8 411 1 6 21 296 278 148 35 chr13 105906159 105906469 -14377843 - L1MB8 LINE L1 -3068 3078 2734 6 1393 332 311 59 29 chr13 105906782 105906918 -14377394 + MER58A DNA MER1_type 47 186 -38 6 1393 579 15 0 0 chr13 105907429 105907497 -14376815 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 6 1393 402 162 0 0 chr13 105907506 105907580 -14376732 + (TA)n Simple_repeat Simple_repeat 2 75 0 6 1393 2913 162 62 10 chr13 105907580 105908213 -14376099 + Lx5 LINE L1 5239 5922 -1128 6 1393 268 330 77 10 chr13 105908213 105908240 -14376072 - ID_B1 SINE B4 -31 193 84 6 1393 279 289 105 0 chr13 105908240 105908316 -14375996 - PB1D10 SINE Alu -31 86 3 6 1393 956 115 22 0 chr13 105909428 105909567 -14374745 + B1_Mus1 SINE Alu 4 145 -3 6 1393 21 36 0 0 chr13 105910787 105910815 -14373497 + AT_rich Low_complexity Low_complexity 1 28 0 6 1393 345 153 107 48 chr13 105910985 105911088 -14373224 - L1MA6 LINE L1 -17 6280 6171 6 1393 1231 271 37 37 chr13 105912532 105912911 -14371401 - MTEa LTR MaLR 0 379 1 6 1393 1336 276 70 31 chr13 105912966 105913520 -14370792 + Lx8 LINE L1 6748 7323 -150 6 1393 3077 23 5 85 chr13 105913573 105913997 -14370315 - RLTR10 LTR ERVK 0 390 1 6 1393 10262 111 45 43 chr13 105913999 105915940 -14368372 - RLTR10-int LTR ERVK -3 1984 41 6 1393 3077 23 5 85 chr13 105915950 105916374 -14367938 - RLTR10 LTR ERVK 0 390 1 6 1393 10262 111 45 43 chr13 105916376 105918317 -14365995 - RLTR10-int LTR ERVK -3 1984 41 6 1393 3077 23 5 85 chr13 105918327 105918751 -14365561 - RLTR10 LTR ERVK 0 390 1 6 1393 816 40 0 0 chr13 105921700 105921800 -14362512 + (TA)n Simple_repeat Simple_repeat 1 100 0 6 1393 1151 278 99 10 chr13 105922384 105922769 -14361543 + MTD LTR MaLR 1 419 0 7 1393 256 313 51 39 chr13 105923605 105923761 -14360551 + Lx8 LINE L1 7179 7336 -137 7 1393 3829 137 24 30 chr13 105923762 105924424 -14359888 + Lx2B LINE L1 6340 6997 -3 7 1393 30 0 0 0 chr13 105924535 105924565 -14359747 + AT_rich Low_complexity Low_complexity 1 30 0 7 1393 2636 112 2 2 chr13 105925366 105925759 -14358553 - Lx LINE L1 -6 6648 6256 7 1393 21 0 0 0 chr13 105926036 105926057 -14358255 + AT_rich Low_complexity Low_complexity 1 21 0 7 1393 9010 106 1 9 chr13 105926277 105927750 -14356562 - Lx LINE L1 -718 5920 4462 7 1393 5157 84 3 1 chr13 105927752 105928440 -14355872 + L1_Mus3 LINE L1 5944 6632 -6 7 1393 283 351 29 22 chr13 105928568 105928705 -14355607 - MER106B DNA MER1_type -906 153 16 7 1393 262 293 129 66 chr13 105929476 105929732 -14354580 - B4A SINE B4 -18 274 3 7 1393 357 178 14 0 chr13 105929815 105929888 -14354424 - L1MA4 LINE L1 -373 5927 5854 7 1393 524 296 150 69 chr13 105930128 105930549 -14353763 + LTR40b LTR ERVL 8 462 0 7 1393 235 185 0 44 chr13 105930717 105930785 -14353527 - Lx7 LINE L1 -19 7677 7613 7 1393 299 366 106 18 chr13 105931204 105931421 -14352891 + MLT1I LTR MaLR 74 309 -102 7 1393 369 0 0 0 chr13 105932456 105932497 -14351815 + (CA)n Simple_repeat Simple_repeat 2 42 0 7 1393 294 278 97 53 chr13 105932497 105932725 -14351587 - L1MB4 LINE L1 -33 6147 5910 7 1393 887 294 65 74 chr13 105932778 105933853 -14350459 - L1MB4 LINE L1 -387 5793 4728 7 1393 517 287 12 37 chr13 105933912 105934075 -14350237 - RSINE1 SINE B4 -2 163 5 7 1393 314 329 58 6 chr13 105934139 105934310 -14350002 - L1MB4 LINE L1 -1512 4631 4452 7 1393 362 316 20 40 chr13 105934370 105934469 -14349843 - PB1D10 SINE Alu -20 97 1 7 1393 281 291 48 60 chr13 105934398 105934482 -14349830 - B4A SINE B4 -140 152 70 7 1393 308 297 93 8 chr13 105934482 105934611 -14349701 - L1M4 LINE L1 -1860 4286 4147 7 1393 1125 179 32 5 chr13 105934971 105935190 -14349122 + URR1B DNA MER1_type 1 225 0 7 1393 229 390 26 0 chr13 105935323 105935400 -14348912 - ID4_ SINE ID -3 80 2 7 1393 2616 50 0 12 chr13 105935549 105935891 -14348421 - ORR1A1 LTR MaLR -8 338 1 7 1393 279 0 0 0 chr13 105937166 105937197 -14347115 + (TG)n Simple_repeat Simple_repeat 2 32 0 7 1393 336 297 118 23 chr13 105938334 105938596 -14345716 + Lx8 LINE L1 7045 7331 -142 7 1393 24 53 0 0 chr13 105938750 105938788 -14345524 + AT_rich Low_complexity Low_complexity 1 38 0 7 1393 1209 235 77 32 chr13 105939331 105939670 -14344642 + MTD LTR MaLR 64 417 -2 7 1393 260 267 77 39 chr13 105939670 105939745 -14344567 - MER5B DNA MER1_type -68 110 33 7 1393 612 298 110 30 chr13 105939850 105940113 -14344199 + B4A SINE B4 4 287 -5 7 1393 288 0 0 0 chr13 105940509 105940541 -14343771 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 1393 1756 166 20 45 chr13 105941092 105941511 -14342801 + RMER17B LTR ERVK 12 438 -468 7 1393 2821 65 42 8 chr13 105941511 105941897 -14342415 - L1Md_F2 LINE L1 -2 6580 6182 7 1393 1712 19 43 0 chr13 105941897 105942108 -14342204 + L1Md_F2 LINE L1 5947 6166 -416 7 1393 3054 136 67 19 chr13 105942108 105942648 -14341664 + RMER17B LTR ERVK 393 958 0 7 1393 204 135 0 0 chr13 105943305 105943342 -14340970 + (G)n Simple_repeat Simple_repeat 1 37 0 7 1393 324 309 94 0 chr13 105943599 105943748 -14340564 - L1MC3 LINE L1 -10 7775 7613 7 1393 301 329 189 0 chr13 105943781 105943924 -14340388 - L1MC3 LINE L1 -230 7555 7386 7 1393 358 286 173 91 chr13 105944185 105944531 -14339781 - L1MEg LINE L1 -4512 1572 1205 7 1393 1188 75 0 26 chr13 105944531 105944682 -14339630 - B1_Mm SINE Alu 0 147 1 7 1393 358 286 173 91 chr13 105944682 105944862 -14339450 - L1MEg LINE L1 -4880 1204 1003 7 1393 24 32 0 0 chr13 105944908 105944939 -14339373 + AT_rich Low_complexity Low_complexity 1 31 0 7 1393 706 238 25 131 chr13 105945036 105945273 -14339039 - B3 SINE B2 -1 215 4 7 1393 328 125 31 0 chr13 105945509 105945573 -14338739 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 7 1393 22 0 0 0 chr13 105945649 105945671 -14338641 + AT_rich Low_complexity Low_complexity 1 22 0 7 1393 358 299 81 27 chr13 105948388 105948536 -14335776 + L3 LINE CR1 4237 4392 -97 7 1393 233 289 46 37 chr13 105952263 105952371 -14331941 + RMER12 LTR ERVK 737 845 -477 7 1393 734 134 8 0 chr13 105952378 105952505 -14331807 + (TCTA)n Simple_repeat Simple_repeat 1 128 0 7 1393 291 281 0 59 chr13 105952505 105952573 -14331739 - ID4 SINE ID -4 79 16 7 1393 313 310 121 5 chr13 105952615 105952813 -14331499 + L1M5 LINE L1 4608 4828 -1318 7 1393 1287 54 0 0 chr13 105952957 105953104 -14331208 + B1_Mm SINE Alu 1 147 0 7 1393 27 0 0 0 chr13 105953535 105953562 -14330750 + AT_rich Low_complexity Low_complexity 1 27 0 7 1393 276 310 111 0 chr13 105953639 105953865 -14330447 - L1MEg LINE L1 -4765 1319 1069 7 1393 409 129 3 21 chr13 105954211 105954289 -14330023 + ID4 SINE ID 1 76 -7 7 1393 805 253 5 16 chr13 105954333 105954522 -14329790 + B3 SINE B2 30 216 0 7 1393 377 291 12 0 chr13 105955019 105955105 -14329207 + RSINE1 SINE B4 3 89 -76 7 1393 494 289 63 5 chr13 105955192 105955383 -14328929 + MER76 LTR ERVL 3 204 -487 7 1393 532 137 63 28 chr13 105955393 105955536 -14328776 + CT-rich Low_complexity Low_complexity 2 149 0 7 1393 728 270 114 32 chr13 105955545 105955886 -14328426 + MER76 LTR ERVL 323 691 0 7 1393 1039 129 11 0 chr13 105956246 105956424 -14327888 + (GAA)n Simple_repeat Simple_repeat 1 180 0 7 1393 504 32 0 0 chr13 105956430 105956492 -14327820 + (GAAA)n Simple_repeat Simple_repeat 2 63 0 7 1393 243 0 0 0 chr13 105956510 105956537 -14327775 + (CAG)n Simple_repeat Simple_repeat 2 28 0 7 1393 423 304 50 107 chr13 105956783 105957081 -14327231 + B4A SINE B4 2 282 -10 7 1393 255 324 112 28 chr13 105960161 105960304 -14324008 + MER5A DNA MER1_type 35 189 0 7 1393 207 0 0 0 chr13 105960618 105960641 -14323671 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1393 4466 142 24 118 chr13 105960661 105961594 -14322718 + Lx3C LINE L1 6125 6969 -7 7 1393 271 65 0 42 chr13 105961598 105961646 -14322666 + (TAA)n Simple_repeat Simple_repeat 2 47 0 7 1393 419 291 97 45 chr13 105961656 105961811 -14322501 - RSINE1 SINE B4 -2 163 1 7 1393 231 300 0 0 chr13 105961999 105962044 -14322268 + B4 SINE B4 1 45 -247 7 1393 1350 190 183 9 chr13 105962044 105962364 -14321948 + ORR1D1 LTR MaLR 1 337 -37 7 1393 719 272 101 34 chr13 105962408 105962617 -14321695 + B4A SINE B4 3 225 -67 7 1393 4810 105 34 0 chr13 105962617 105963267 -14321045 + Lx LINE L1 5977 6648 -6 7 1393 452 158 12 0 chr13 105963275 105963357 -14320955 + URR1B DNA MER1_type 143 225 0 7 1393 28 0 0 0 chr13 105964417 105964445 -14319867 + AT_rich Low_complexity Low_complexity 1 28 0 7 1393 402 156 52 0 chr13 105964709 105964786 -14319526 - Lx6 LINE L1 -885 6575 6495 7 1393 3529 193 115 22 chr13 105964778 105965621 -14318691 + Lx5 LINE L1 4860 5783 -1267 7 1393 509 273 31 7 chr13 105966052 105966190 -14318122 - B1F SINE Alu -10 139 7 7 1393 298 328 153 25 chr13 105966476 105966751 -14317561 + MER113A DNA MER1_type 1 310 -4 7 1393 296 328 104 7 chr13 105967143 105967278 -14317034 - MER20B DNA MER1_type -572 211 64 7 1393 529 250 60 46 chr13 105967688 105967906 -14316406 - L1M4 LINE L1 -941 5205 4985 7 1393 226 271 51 0 chr13 105967924 105967983 -14316329 + MamGypLTR2 LTR Gypsy 503 564 -625 7 1393 21 0 0 0 chr13 105969104 105969125 -14315187 + AT_rich Low_complexity Low_complexity 1 21 0 7 1393 444 370 83 15 chr13 105969441 105969707 -14314605 + L4 LINE RTE 1490 1773 -256 7 1393 23 33 0 0 chr13 105971821 105971851 -14312461 + AT_rich Low_complexity Low_complexity 1 30 0 7 1393 389 342 141 23 chr13 105972755 105973018 -14311294 + MLT1A0 LTR MaLR 53 346 -19 7 1393 232 306 75 43 chr13 105973669 105973857 -14310455 - L1M5 LINE L1 -1453 4693 4500 7 1393 319 185 19 0 chr13 105974295 105974349 -14309963 - B3A SINE B2 -80 118 64 7 1393 276 30 0 0 chr13 105974679 105974712 -14309600 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 7 1393 1227 62 0 0 chr13 105974712 105974849 -14309463 - B1_Mus1 SINE Alu -9 139 3 7 1393 231 36 0 0 chr13 105974949 105974977 -14309335 + (TA)n Simple_repeat Simple_repeat 2 29 0 7 1393 384 22 0 0 chr13 105974977 105975021 -14309291 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1393 342 191 0 31 chr13 105975171 105975236 -14309076 + RSINE1 SINE B4 72 134 -31 7 1393 219 36 0 0 chr13 105975253 105975281 -14309031 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 7 1393 363 355 99 28 chr13 105975467 105975609 -14308703 - RSINE1 SINE B4 -6 159 8 7 1393 341 336 151 19 chr13 105976161 105976485 -14307827 + MLT1J-int LTR MaLR 83 449 -938 7 1393 249 259 45 34 chr13 105976914 105977002 -14307310 + L1M2 LINE L1 6 94 -6755 7 1393 621 259 68 0 chr13 105977748 105977895 -14306417 + B3A SINE B2 11 167 -31 7 1393 270 0 0 0 chr13 105978784 105978814 -14305498 + (CA)n Simple_repeat Simple_repeat 2 31 0 7 1393 261 0 0 0 chr13 105979909 105979938 -14304374 + (TC)n Simple_repeat Simple_repeat 2 30 0 7 1393 390 57 0 0 chr13 105979938 105979991 -14304321 + (CA)n Simple_repeat Simple_repeat 1 53 0 7 1393 198 0 0 0 chr13 105980397 105980419 -14303893 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 7 1393 643 195 39 31 chr13 105980421 105980548 -14303764 - B1_Mur4 SINE Alu -13 137 10 7 1393 360 314 49 33 chr13 105980439 105980561 -14303751 - B4 SINE B4 -85 207 84 7 1393 950 264 34 15 chr13 105980635 105980904 -14303408 - B4 SINE B4 0 292 19 7 1393 322 264 123 0 chr13 105981139 105981245 -14303067 - RSINE1 SINE B4 -7 158 40 7 1393 1227 86 90 17 chr13 105981340 105981518 -14302794 - B2_Mm2 SINE B2 -3 192 2 7 1393 442 306 24 16 chr13 105981594 105981717 -14302595 - B1F SINE Alu -8 141 18 7 1393 1248 54 0 13 chr13 105981772 105981921 -14302391 + B1_Mus1 SINE Alu 1 147 -1 8 1393 22 0 0 0 chr13 105981938 105981960 -14302352 + AT_rich Low_complexity Low_complexity 1 22 0 8 1393 271 280 132 31 chr13 105982107 105982236 -14302076 + MIRb SINE MIR 42 183 -85 8 1393 1191 134 121 29 chr13 105982937 105983144 -14301168 + URR1A DNA MER1_type 1 226 0 8 1393 686 117 9 0 chr13 105984087 105984198 -14300114 + (TC)n Simple_repeat Simple_repeat 1 112 0 8 1393 576 299 21 134 chr13 105984198 105984526 -14299786 - B4A SINE B4 0 292 2 8 1393 1450 77 53 0 chr13 105984742 105984949 -14299363 - Lx3_Mus LINE L1 0 7009 6792 8 1393 1950 163 90 19 chr13 105985217 105985585 -14298727 + ORR1B1 LTR MaLR 1 394 0 8 1393 527 224 28 18 chr13 105985672 105985781 -14298531 - B1F SINE Alu -21 128 19 8 1393 1238 75 0 0 chr13 105985861 105986007 -14298305 + B1_Mus2 SINE Alu 2 147 0 8 1393 809 51 178 8 chr13 105986688 105986806 -14297506 - L1Md_F2 LINE L1 -2 6580 6443 8 1393 320 328 68 15 chr13 105987048 105987181 -14297131 + MIR SINE MIR 28 167 -95 8 1393 323 328 148 52 chr13 105987280 105987707 -14296605 + RLTR40 LTR ERVK 71 538 -279 8 1393 564 296 52 29 chr13 105987905 105988079 -14296233 - B3 SINE B2 -4 212 35 8 1393 246 292 79 0 chr13 105988075 105988164 -14296148 + MER89 LTR ERV1 371 466 -93 8 1393 1486 122 4 0 chr13 105988164 105988394 -14295918 + Lx2 LINE L1 5837 6067 -930 8 1393 275 209 75 0 chr13 105988394 105988461 -14295851 + MER89 LTR ERV1 479 550 -9 8 1393 7302 148 89 16 chr13 105989071 105991326 -14292986 - Lx2 LINE L1 0 7000 4355 8 1393 3798 264 54 49 chr13 105991328 105993465 -14290847 + Lx8 LINE L1 4767 6918 -555 8 1393 2289 199 26 16 chr13 105993475 105993898 -14290414 + Lx5 LINE L1 6624 7050 0 8 1393 1531 138 9 0 chr13 105994771 105994988 -14289324 + URR1A DNA MER1_type 5 223 -3 8 1393 1203 82 0 0 chr13 105995303 105995450 -14288862 + B1_Mus1 SINE Alu 1 147 -1 8 1393 353 341 110 10 chr13 105996934 105997173 -14287139 - MIRb SINE MIR -1 267 1 8 1393 609 255 101 0 chr13 105997423 105997572 -14286740 - Lx8 LINE L1 -137 7336 7173 8 1393 4877 97 1 12 chr13 105997649 105998295 -14286017 - Lx LINE L1 -7 6647 6009 8 1393 26 0 0 0 chr13 105999151 105999177 -14285135 + AT_rich Low_complexity Low_complexity 1 26 0 8 1393 381 43 0 0 chr13 105999300 105999347 -14284965 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 8 1393 321 68 0 0 chr13 105999351 105999395 -14284917 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1393 481 213 64 9 chr13 105999397 105999506 -14284806 - ID_B1 SINE B4 -8 216 102 8 1393 34 24 0 0 chr13 105999835 105999876 -14284436 + AT_rich Low_complexity Low_complexity 1 41 0 8 1393 1002 290 170 22 chr13 106000855 106001231 -14283081 - L1MA7 LINE L1 -78 7194 6744 1 1393 429 20 0 0 chr13 106001231 106001281 -14283031 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 2 1393 768 314 36 0 chr13 106001281 106001475 -14282837 - B3 SINE B2 -14 202 2 3 1393 1002 291 171 23 chr13 106001475 106001816 -14282496 - L1MA7 LINE L1 -529 6743 6379 1 1393 1248 55 0 7 chr13 106001816 106001964 -14282348 - B1_Mm SINE Alu 0 147 1 4 1393 874 288 111 13 chr13 106001964 106002170 -14282142 - L1MA7 LINE L1 -894 6378 6136 1 1393 678 266 169 35 chr13 106002565 106003028 -14281284 - L1MA7 LINE L1 -1513 5590 5066 1 1393 249 119 0 0 chr13 106003188 106003230 -14281082 + (TA)n Simple_repeat Simple_repeat 1 42 0 5 1393 812 287 112 21 chr13 106003285 106003848 -14280464 + L1M2 LINE L1 3344 3957 -2186 6 1393 348 254 135 52 chr13 106003918 106004024 -14280288 - L1MA7 LINE L1 -2845 4255 4129 1 1393 1102 175 120 0 chr13 106004024 106004224 -14280088 - URR1A DNA MER1_type -2 224 1 7 1393 348 254 132 53 chr13 106004224 106004383 -14279929 - L1MA7 LINE L1 -2972 4128 3961 1 1393 287 352 0 18 chr13 106004393 106004503 -14279809 - L1MA7 LINE L1 -5068 1962 1855 1 1393 258 308 109 36 chr13 106005582 106005720 -14278592 - Ricksha_c DNA MuDR -1308 740 593 8 1393 216 0 0 0 chr13 106006037 106006061 -14278251 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1393 724 269 0 7 chr13 106006065 106006215 -14278097 - B1_Mur1 SINE Alu 0 149 1 1 1393 507 243 36 14 chr13 106007312 106007364 -14276948 + RMER30 DNA MER1_type 43 93 -109 1 1393 423 0 0 0 chr13 106007364 106007411 -14276901 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1393 507 243 36 14 chr13 106007411 106007496 -14276816 + RMER30 DNA MER1_type 94 183 -19 1 1393 180 0 0 0 chr13 106008238 106008258 -14276054 + (CA)n Simple_repeat Simple_repeat 1 20 0 1 1393 807 101 0 0 chr13 106008258 106008376 -14275936 + (GAAA)n Simple_repeat Simple_repeat 4 122 0 1 1393 902 256 112 47 chr13 106008927 106009542 -14274770 + L1MB1 LINE L1 5105 5770 -419 1 1393 239 320 10 10 chr13 106009709 106009813 -14274499 + L1MB1 LINE L1 6038 6141 -27 1 1393 2258 223 132 102 chr13 106011605 106013135 -14271177 - RMER1A Other Other -2 1028 1 1 1393 348 221 126 0 chr13 106013668 106013795 -14270517 + Lx6 LINE L1 7314 7456 -4 1 1393 268 270 292 0 chr13 106013835 106013924 -14270388 + PB1D10 SINE Alu 3 117 0 1 1393 195 42 0 0 chr13 106015774 106015798 -14268514 + (TG)n Simple_repeat Simple_repeat 2 25 0 1 1393 887 253 139 4 chr13 106015911 106016149 -14268163 - B4A SINE B4 -20 272 3 2 1393 474 282 0 0 chr13 106016248 106016351 -14267961 + RSINE1 SINE B4 3 105 -60 2 1393 1435 78 14 29 chr13 106016424 106016634 -14267678 + L1Md_F2 LINE L1 6376 6582 0 2 1393 2084 164 84 12 chr13 106016976 106017402 -14266910 - Lx9 LINE L1 0 7644 7188 2 1393 3418 193 40 3 chr13 106017412 106018078 -14266234 + Lx9 LINE L1 6474 7164 -480 2 1393 1662 275 92 106 chr13 106019085 106020006 -14264306 + Lx4A LINE L1 5856 6763 -295 2 1393 347 212 40 99 chr13 106020005 106020157 -14264155 + Lx6 LINE L1 7309 7451 -9 2 1393 791 261 38 19 chr13 106021820 106022031 -14262281 + B3 SINE B2 1 215 -1 2 1393 1476 220 43 5 chr13 106022081 106022478 -14261834 + RCHARR1 DNA MER1_type 430 841 -133 2 1393 679 243 0 11 chr13 106022506 106022689 -14261623 + RCHARR1 DNA MER1_type 780 960 -14 2 1393 1883 228 88 7 chr13 106023089 106023530 -14260782 - Lx6 LINE L1 -1 7459 6983 2 1393 488 278 9 0 chr13 106023584 106023699 -14260613 - B3 SINE B2 -99 117 2 2 1393 704 279 11 58 chr13 106023738 106023928 -14260384 + B3A SINE B2 2 182 -16 3 1393 225 0 0 0 chr13 106024017 106024042 -14260270 + (TC)n Simple_repeat Simple_repeat 1 25 0 3 1393 4018 251 107 44 chr13 106024052 106025577 -14258735 - Tigger1 DNA MER2_type -208 2210 590 3 1393 1208 249 162 35 chr13 106025607 106025665 -14258647 + L1M2 LINE L1 4511 4568 -1575 3 1393 2459 111 159 30 chr13 106025665 106026092 -14258220 + RLTR45 LTR ERVK 1 482 0 3 1393 1208 249 162 35 chr13 106026092 106026434 -14257878 + L1M2 LINE L1 4569 4974 -1169 3 1393 243 0 0 0 chr13 106026434 106026461 -14257851 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1393 1208 249 162 35 chr13 106026461 106026608 -14257704 + L1M2 LINE L1 4975 5127 -1016 3 1393 2283 168 54 47 chr13 106026611 106027187 -14257125 + RLTR31_Mm LTR ERVK 1 526 -58 3 1393 229 276 63 54 chr13 106027237 106027348 -14256964 + RMER3D2 LTR ERVK 479 590 0 3 1393 386 246 191 19 chr13 106027353 106027568 -14256744 + L1M2 LINE L1 5133 5384 -759 3 1393 1186 222 178 9 chr13 106027624 106027955 -14256357 - MTD LTR MaLR -15 404 18 3 1393 2350 45 65 7 chr13 106028482 106028775 -14255537 + L1Md_F2 LINE L1 6273 6582 0 3 1393 2079 201 154 112 chr13 106029240 106030097 -14254215 + RLTR13B1 LTR ERVK 1 893 0 4 1393 291 279 52 123 chr13 106030105 106030260 -14254052 + MLT1D LTR MaLR 355 498 -7 4 1393 28 48 0 0 chr13 106031782 106031824 -14252488 + AT_rich Low_complexity Low_complexity 1 42 0 4 1393 429 282 84 7 chr13 106032347 106032490 -14251822 - MLT1A1 LTR MaLR -1 407 254 4 1393 495 75 36 50 chr13 106032577 106032717 -14251595 + (TG)n Simple_repeat Simple_repeat 2 139 0 4 1393 1035 250 87 28 chr13 106032719 106033040 -14251272 - Lx9 LINE L1 -83 7561 7222 4 1393 547 243 13 60 chr13 106033057 106033206 -14251106 - B1F SINE Alu -7 142 1 4 1393 365 58 19 0 chr13 106033387 106033439 -14250873 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 1393 282 29 0 0 chr13 106033848 106033883 -14250429 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1393 194 308 63 42 chr13 106033884 106033979 -14250333 + MER5B DNA MER1_type 71 167 -11 4 1393 606 218 129 0 chr13 106034522 106034646 -14249666 + B1_Mur1 SINE Alu 2 141 -8 5 1393 627 306 7 0 chr13 106034715 106034862 -14249450 - RSINE1 SINE B4 -12 153 6 5 1393 780 256 11 27 chr13 106035176 106035361 -14248951 + B3A SINE B2 1 182 -16 5 1393 243 302 89 54 chr13 106036116 106036228 -14248084 - RMER21B LTR ERV1 -150 692 577 5 1393 860 324 48 57 chr13 106036569 106037129 -14247183 + L1MD2 LINE L1 5441 5995 -364 5 1394 25 0 0 0 chr13 106037805 106037830 -14246482 + AT_rich Low_complexity Low_complexity 1 25 0 5 1394 204 40 0 0 chr13 106038328 106038353 -14245959 + (TG)n Simple_repeat Simple_repeat 1 25 0 5 1394 279 0 0 0 chr13 106038845 106038876 -14245436 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 1394 537 144 0 0 chr13 106041785 106041889 -14242423 + (TG)n Simple_repeat Simple_repeat 2 105 0 5 1394 243 300 25 3 chr13 106043173 106043266 -14241046 + MIR SINE MIR 67 166 -110 5 1394 1171 132 18 3 chr13 106044798 106044992 -14239320 - Lx2A LINE L1 -237 5957 5726 6 1394 446 132 0 15 chr13 106044992 106045073 -14239239 + MTB LTR MaLR 131 210 -211 6 1394 694 44 0 81 chr13 106045073 106045172 -14239140 - L1_Mus1 LINE L1 -194 6373 6283 6 1394 447 42 53 40 chr13 106045172 106045247 -14239065 + L1Md_F2 LINE L1 6503 6578 -4 6 1394 1734 46 0 5 chr13 106045258 106045477 -14238835 + MTB LTR MaLR 183 400 0 6 1394 256 226 0 36 chr13 106045577 106045632 -14238680 + B2_Mm2 SINE B2 50 102 -93 6 1394 27 0 0 0 chr13 106045658 106045685 -14238627 + AT_rich Low_complexity Low_complexity 1 27 0 6 1394 504 319 52 47 chr13 106045810 106045979 -14238333 + B3A SINE B2 2 177 -21 6 1394 339 85 0 0 chr13 106045979 106046026 -14238286 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1394 477 0 0 0 chr13 106046026 106046078 -14238234 + (GA)n Simple_repeat Simple_repeat 2 54 0 6 1394 504 319 52 47 chr13 106046078 106046098 -14238214 + B3A SINE B2 178 192 -6 6 1394 635 277 82 21 chr13 106046168 106046448 -14237864 + MLT-int LTR MaLR 2 298 -1437 6 1394 283 282 14 27 chr13 106046470 106046543 -14237769 + PB1 SINE Alu 5 76 -51 7 1394 758 259 161 10 chr13 106046820 106047112 -14237200 + MLT-int LTR MaLR 1387 1722 -13 6 1394 233 185 15 15 chr13 106047170 106047236 -14237076 + T-rich Low_complexity Low_complexity 1 66 0 7 1394 287 282 0 8 chr13 106048448 106048573 -14235739 + (TA)n Simple_repeat Simple_repeat 2 125 0 7 1394 297 0 0 0 chr13 106048768 106048801 -14235511 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 7 1394 727 265 61 0 chr13 106049056 106049252 -14235060 + MER2 DNA MER2_type 123 330 -15 7 1394 34425 91 23 7 chr13 106049967 106055402 -14228910 + L1_Mur1 LINE L1 43 5886 0 7 1394 326 246 17 0 chr13 106056379 106056497 -14227815 + (TATG)n Simple_repeat Simple_repeat 2 121 0 7 1394 375 23 0 0 chr13 106056916 106056960 -14227352 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1394 200 59 0 29 chr13 106057434 106057469 -14226843 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 7 1394 31 96 0 0 chr13 106058012 106058106 -14226206 + AT_rich Low_complexity Low_complexity 1 94 0 7 1394 370 318 31 8 chr13 106058231 106058358 -14225954 - MLT1A LTR MaLR -6 368 239 8 1394 31 68 0 0 chr13 106059376 106059435 -14224877 + AT_rich Low_complexity Low_complexity 1 59 0 8 1394 253 331 80 29 chr13 106059941 106060078 -14224234 + MIR SINE MIR 66 209 -59 8 1394 291 292 145 35 chr13 106060490 106060828 -14223484 + L1ME2 LINE L1 5775 6159 -3 8 1394 445 246 57 0 chr13 106061920 106062042 -14222270 + RSINE1 SINE B4 13 141 -24 8 1394 199 130 0 36 chr13 106062176 106062232 -14222080 + T-rich Low_complexity Low_complexity 1 54 0 8 1394 2806 199 109 35 chr13 106062397 106063152 -14221160 - RMER1B Other Other -4 1062 16 8 1394 2039 214 24 39 chr13 106063190 106063653 -14220659 + Lx6 LINE L1 7003 7458 -2 8 1394 183 321 19 0 chr13 106063836 106063889 -14220423 - L2c LINE L2 -16 3371 3318 8 1394 432 277 43 21 chr13 106064200 106064340 -14219972 + B1F SINE Alu 7 149 0 8 1394 294 261 148 0 chr13 106065020 106065162 -14219150 + MER33 DNA MER1_type 26 188 -136 9 1394 508 329 13 19 chr13 106065352 106065507 -14218805 - RSINE1 SINE B4 0 165 12 9 1394 6666 58 14 0 chr13 106065523 106066312 -14218000 - L1_Mus1 LINE L1 0 6567 5768 9 1394 4743 71 0 2 chr13 106066312 106066917 -14217395 + L1_Mus1 LINE L1 5149 5752 -131 9 1394 638 269 10 123 chr13 106066919 106067114 -14217198 - B4A SINE B4 -68 224 52 9 1394 393 265 40 95 chr13 106067197 106067397 -14216915 - RMER30 DNA MER1_type -6 196 8 9 1394 32 0 0 0 chr13 106067490 106067522 -14216790 + AT_rich Low_complexity Low_complexity 1 32 0 9 1394 947 309 125 15 chr13 106068187 106068650 -14215662 - Lx8 LINE L1 -147 7326 6813 9 1394 509 270 49 20 chr13 106069166 106069370 -14214942 - Charlie1a DNA MER1_type -629 826 617 9 1394 396 336 9 0 chr13 106070228 106070335 -14213977 - PB1 SINE Alu -18 109 2 9 1394 863 246 61 41 chr13 106071352 106071598 -14212714 + ORR1E LTR MaLR 1 251 -108 9 1394 229 210 62 0 chr13 106071616 106071840 -14212472 + (CCTTG)n Simple_repeat Simple_repeat 1 238 0 1 1394 280 210 66 0 chr13 106071890 106072151 -14212161 + (CCTTG)n Simple_repeat Simple_repeat 1 278 0 1 1394 267 190 66 0 chr13 106072151 106072288 -14212024 + (TCTTG)n Simple_repeat Simple_repeat 2 147 0 1 1394 244 214 65 0 chr13 106072344 106072512 -14211800 + (CCTTG)n Simple_repeat Simple_repeat 2 180 0 1 1394 212 206 59 0 chr13 106072513 106072581 -14211731 + (TCTTG)n Simple_repeat Simple_repeat 3 74 0 1 1394 574 238 23 36 chr13 106072581 106072740 -14211572 + ORR1E LTR MaLR 213 379 0 9 1394 354 255 103 86 chr13 106073188 106073304 -14211008 - ORR1E LTR MaLR -241 118 1 1 1394 23 0 0 0 chr13 106074883 106074906 -14209406 + AT_rich Low_complexity Low_complexity 1 23 0 1 1394 480 18 0 0 chr13 106075676 106075733 -14208579 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1394 645 261 48 37 chr13 106076097 106076284 -14208028 + MLT1A1 LTR MaLR 213 401 -7 1 1394 272 250 108 27 chr13 106076816 106076890 -14207422 - ID4_ SINE ID -2 81 2 1 1394 279 0 0 0 chr13 106078130 106078161 -14206151 + (T)n Simple_repeat Simple_repeat 1 31 0 1 1394 1889 183 46 46 chr13 106078193 106078606 -14205706 - MTD LTR MaLR -6 413 1 1 1394 3468 209 99 37 chr13 106078855 106080025 -14204287 - MMVL30-int LTR ERV1 -2312 5140 2874 1 1394 253 252 167 62 chr13 106080025 106080169 -14204143 - MMVL30-int LTR ERV1 -3377 4179 4021 1 1394 3802 155 57 73 chr13 106080207 106081054 -14203258 - MMVL30-int LTR ERV1 -2402 2661 1496 1 1394 378 0 0 0 chr13 106081206 106081248 -14203064 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 1394 270 0 0 0 chr13 106081248 106081278 -14203034 + (CA)n Simple_repeat Simple_repeat 1 30 0 1 1394 510 173 106 39 chr13 106081401 106081581 -14202731 - MMVL30-int LTR ERV1 -2088 1211 1020 1 1394 529 142 14 112 chr13 106081551 106081694 -14202618 - MMVL30-int LTR ERV1 -2222 1077 949 1 1394 2610 176 46 131 chr13 106081744 106082102 -14202210 - MMVL30-int LTR ERV1 -2207 1491 1158 1 1394 186 43 0 0 chr13 106082102 106082125 -14202187 + (CAGG)n Simple_repeat Simple_repeat 2 24 0 1 1394 2610 176 46 131 chr13 106082125 106082553 -14201759 - MMVL30-int LTR ERV1 -2541 1157 772 1 1394 240 317 47 45 chr13 106083628 106083830 -14200482 + MIRc SINE MIR 59 261 -7 1 1394 25 95 0 0 chr13 106084159 106084233 -14200079 + GC_rich Low_complexity Low_complexity 1 74 0 1 1394 21 0 0 0 chr13 106085114 106085135 -14199177 + AT_rich Low_complexity Low_complexity 1 21 0 1 1394 227 297 54 68 chr13 106085236 106085384 -14198928 + B1F SINE Alu 2 147 -2 1 1394 399 268 71 54 chr13 106085420 106085652 -14198660 + L1M4 LINE L1 3667 3913 -2227 1 1394 369 0 0 0 chr13 106086089 106086130 -14198182 + (CA)n Simple_repeat Simple_repeat 2 42 0 1 1394 472 316 121 0 chr13 106086183 106086389 -14197923 + L1M4 LINE L1 3916 4146 -2000 1 1394 534 326 146 11 chr13 106086848 106087115 -14197197 + MLT1E2 LTR MaLR 6 308 -319 1 1394 716 268 68 71 chr13 106087684 106087965 -14196347 + MTE2b LTR MaLR 3 282 -97 1 1394 374 359 20 33 chr13 106088221 106088371 -14195941 - MER2 DNA MER2_type -1 344 197 1 1394 242 321 35 12 chr13 106088400 106088485 -14195827 - B1F SINE Alu -53 96 10 1 1394 542 156 0 82 chr13 106088500 106088696 -14195616 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 1394 689 286 37 14 chr13 106088704 106088905 -14195407 - B3A SINE B2 -12 204 1 1 1394 332 231 102 55 chr13 106088907 106089035 -14195277 - MER2 DNA MER2_type -122 223 90 1 1394 646 197 80 7 chr13 106089062 106089200 -14195112 + B1_Mus1 SINE Alu 1 148 0 1 1394 372 59 0 0 chr13 106089371 106089422 -14194890 + (A)n Simple_repeat Simple_repeat 1 51 0 1 1394 232 61 60 20 chr13 106089419 106089469 -14194843 + (CAAAC)n Simple_repeat Simple_repeat 2 53 0 1 1394 237 247 133 64 chr13 106089658 106089831 -14194481 - MER34A1 LTR ERV1 -79 508 324 1 1394 725 123 34 0 chr13 106090425 106090571 -14193741 + (TCTA)n Simple_repeat Simple_repeat 2 152 0 1 1394 258 316 65 97 chr13 106091257 106091411 -14192901 + MIR SINE MIR 114 262 0 1 1394 6563 203 34 53 chr13 106091731 106093247 -14191065 - Lx6 LINE L1 -420 7040 5555 1 1394 277 350 167 34 chr13 106093844 106094282 -14190030 - L2 LINE L2 -527 2892 2397 1 1394 554 194 28 0 chr13 106094300 106094408 -14189904 + MTE2a LTR MaLR 6 116 -263 1 1394 630 222 123 6 chr13 106094435 106094598 -14189714 + MTE2a LTR MaLR 195 376 -3 1 1394 4438 31 0 0 chr13 106094823 106095305 -14189007 + LTRIS_Mm LTR ERV1 1 482 0 1 1394 595 205 36 57 chr13 106095350 106095490 -14188822 + B1F1 SINE Alu 1 137 -12 1 1394 435 277 176 0 chr13 106096053 106096172 -14188140 + B3 SINE B2 6 145 -71 1 1394 306 0 0 0 chr13 106096172 106096206 -14188106 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1394 441 0 0 0 chr13 106096377 106096426 -14187886 + (TC)n Simple_repeat Simple_repeat 1 49 0 1 1394 1652 116 47 12 chr13 106096427 106096680 -14187632 - Lx3B LINE L1 -7 6966 6705 1 1394 245 327 0 73 chr13 106097190 106097299 -14187013 - MLT1A1 LTR MaLR -40 368 268 1 1394 513 298 148 81 chr13 106097504 106097556 -14186756 + LTR82B Low_complexity ERVL 245 293 -537 1 1394 2241 135 165 0 chr13 106097556 106097637 -14186675 - RMER4A LTR ERVK 0 466 350 1 1394 450 0 0 0 chr13 106097637 106097687 -14186625 + (GA)n Simple_repeat Simple_repeat 1 50 0 1 1394 2241 135 165 0 chr13 106097687 106098005 -14186307 - RMER4A LTR ERVK -117 349 2 1 1394 513 298 148 81 chr13 106098005 106098485 -14185827 + LTR82B Low_complexity ERVL 294 813 -17 1 1394 436 278 26 159 chr13 106098605 106098776 -14185536 + B3A SINE B2 2 154 -44 1 1394 579 62 0 0 chr13 106098776 106098856 -14185456 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 1394 436 278 26 159 chr13 106098856 106098911 -14185401 + B3A SINE B2 155 198 0 1 1394 276 235 0 0 chr13 106099194 106099262 -14185050 + (CCA)n Simple_repeat Simple_repeat 1 68 0 1 1394 822 262 69 0 chr13 106099450 106099652 -14184660 - B3 SINE B2 0 216 1 1 1394 375 309 0 0 chr13 106100190 106100274 -14184038 + PB1D10 SINE Alu 2 85 -32 1 1394 2598 294 53 141 chr13 106100313 106101891 -14182421 + Lx8 LINE L1 6034 7471 -2 1 1394 343 261 14 190 chr13 106102075 106102217 -14182095 + RSINE1 SINE B4 5 121 -44 1 1394 846 268 124 66 chr13 106102287 106102635 -14181677 + ORR1D2 LTR MaLR 3 370 0 1 1394 317 329 89 51 chr13 106103042 106103199 -14181113 + LTR16A1 LTR ERVL 159 321 -135 1 1394 369 221 148 47 chr13 106103611 106103739 -14180573 + B1F SINE Alu 9 149 0 1 1394 277 333 13 13 chr13 106103743 106103822 -14180490 + ID4 SINE ID 2 80 -3 1 1394 259 197 131 0 chr13 106103848 106103909 -14180403 + Lx8 LINE L1 6761 6829 -644 1 1394 321 269 0 0 chr13 106104036 106104114 -14180198 + Lx8 LINE L1 6804 6881 -592 1 1394 1069 297 44 42 chr13 106104112 106104562 -14179750 + Lx8 LINE L1 6997 7447 -26 1 1394 28 48 0 0 chr13 106104595 106104637 -14179675 + AT_rich Low_complexity Low_complexity 1 42 0 1 1394 226 340 215 18 chr13 106105644 106106025 -14178287 - L2 LINE L2 -540 2879 2424 1 1394 247 248 19 15 chr13 106106535 106106619 -14177693 + L2a LINE L2 3300 3425 -1 1 1394 847 186 122 46 chr13 106106630 106106827 -14177485 + RMER19A LTR ERVK 526 737 0 1 1394 22 0 0 0 chr13 106108690 106108712 -14175600 + AT_rich Low_complexity Low_complexity 1 22 0 1 1394 240 122 0 0 chr13 106109061 106109102 -14175210 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1394 8503 107 53 5 chr13 106109148 106111139 -14173173 - L1_Mus3 LINE L1 -7 6631 4539 1 1394 6160 126 3 0 chr13 106111139 106112082 -14172230 + L1_Mus3 LINE L1 3484 4429 -1454 1 1394 6661 34 0 2 chr13 106112539 106113333 -14170979 + L1Md_T LINE L1 5791 6582 0 1 1394 957 146 176 5 chr13 106113818 106114011 -14170301 + URR1A DNA MER1_type 1 226 0 1 1394 561 30 0 0 chr13 106114029 106114096 -14170216 + (CA)n Simple_repeat Simple_repeat 1 67 0 1 1394 870 282 9 142 chr13 106114416 106114747 -14169565 + ORR1E LTR MaLR 3 289 -70 1 1394 327 146 0 0 chr13 106114767 106114822 -14169490 + (CAA)n Simple_repeat Simple_repeat 1 55 0 1 1394 491 72 0 0 chr13 106115815 106115884 -14168428 + L1_Mus2 LINE L1 6079 6147 -419 1 1394 1061 65 0 7 chr13 106115884 106116023 -14168289 - B1_Mus1 SINE Alu 0 148 11 1 1394 3185 62 5 43 chr13 106116023 106116464 -14167848 + L1_Mus2 LINE L1 6143 6566 0 1 1394 417 213 0 44 chr13 106116761 106116874 -14167438 - Lx9 LINE L1 -4 7640 7533 1 1394 495 96 0 0 chr13 106116878 106116961 -14167351 + (TG)n Simple_repeat Simple_repeat 2 84 0 1 1394 4341 221 66 34 chr13 106116961 106117992 -14166320 - Lx9 LINE L1 -227 7417 6354 1 1394 494 31 16 0 chr13 106118058 106118122 -14166190 + (TTA)n Simple_repeat Simple_repeat 2 66 0 1 1394 1770 183 47 0 chr13 106118122 106118460 -14165852 - Lx3C LINE L1 -13 6963 6610 1 1394 231 211 201 44 chr13 106118468 106118627 -14165685 - Lx9 LINE L1 -1303 6341 6158 1 1394 271 179 36 0 chr13 106118654 106118710 -14165602 - Lx9 LINE L1 -1656 5988 5931 1 1394 21 0 0 0 chr13 106118855 106118876 -14165436 + AT_rich Low_complexity Low_complexity 1 21 0 1 1394 258 382 81 0 chr13 106119223 106119346 -14164966 + MER5A DNA MER1_type 9 141 -48 1 1394 218 316 30 83 chr13 106119790 106119959 -14164353 - L2 LINE L2 -359 3060 2901 1 1394 245 291 0 0 chr13 106121142 106121197 -14163115 + (CGTG)n Simple_repeat Simple_repeat 1 55 0 1 1394 423 242 175 30 chr13 106121384 106121550 -14162762 - B3A SINE B2 -6 192 3 1 1394 1831 299 90 77 chr13 106121617 106122983 -14161329 - Lx8 LINE L1 -23 7450 6067 1 1394 21 0 0 0 chr13 106123509 106123530 -14160782 + AT_rich Low_complexity Low_complexity 1 21 0 1 1394 829 329 87 108 chr13 106123962 106124346 -14159966 + Lx8 LINE L1 5823 6190 -1283 1 1394 225 132 0 0 chr13 106124346 106124384 -14159928 + (ATG)n Simple_repeat Simple_repeat 2 39 0 1 1394 829 329 87 108 chr13 106124384 106124920 -14159392 + Lx8 LINE L1 6191 6724 -749 1 1394 854 162 6 0 chr13 106125129 106125308 -14159004 + GA-rich Low_complexity Low_complexity 1 180 0 1 1394 591 314 97 0 chr13 106125333 106125642 -14158670 + L1MA4 LINE L1 2379 2717 -3426 1 1394 573 235 205 4 chr13 106125926 106126165 -14158147 + L1MA4 LINE L1 4102 4388 -1755 1 1394 1005 156 62 0 chr13 106126429 106126621 -14157691 + L1_Mur2 LINE L1 3821 4024 -1853 1 1394 1836 294 55 11 chr13 106126623 106127087 -14157225 + Lx5 LINE L1 6473 6942 -108 1 1394 621 0 0 0 chr13 106127087 106127156 -14157156 + (GAGAA)n Simple_repeat Simple_repeat 3 71 0 1 1394 1836 294 55 11 chr13 106127156 106127238 -14157074 + Lx5 LINE L1 6943 7043 -7 1 1394 1264 283 38 18 chr13 106127256 106127759 -14156553 + L1MA4 LINE L1 4597 5109 -1034 1 1394 420 219 84 52 chr13 106128233 106128422 -14155890 + L1MA4 LINE L1 5818 6015 -276 1 1394 21 71 0 0 chr13 106130004 106130046 -14154266 + AT_rich Low_complexity Low_complexity 1 42 0 1 1394 225 156 26 13 chr13 106130212 106130290 -14154022 + (CA)n Simple_repeat Simple_repeat 2 80 0 1 1394 997 103 17 11 chr13 106131273 106131450 -14152862 + (GGAGA)n Simple_repeat Simple_repeat 2 179 0 1 1394 1202 90 6 0 chr13 106131451 106131629 -14152683 + (GAGAA)n Simple_repeat Simple_repeat 1 179 0 1 1394 2861 28 46 19 chr13 106131806 106132174 -14152138 - L1_Mus1 LINE L1 -410 6157 5780 1 1394 2352 57 3 0 chr13 106132174 106132474 -14151838 + L1_Mus1 LINE L1 6266 6566 -1 1 1394 535 283 7 7 chr13 106132480 106132619 -14151693 + RMER30 DNA MER1_type 63 201 -1 1 1394 261 334 150 47 chr13 106132953 106133253 -14151059 - MLT1H2 LTR MaLR -8 571 246 1 1394 240 35 0 0 chr13 106133456 106133485 -14150827 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1394 468 292 93 46 chr13 106133620 106133969 -14150343 + RLTR17 LTR ERVK 73 426 -266 2 1394 701 166 117 19 chr13 106134286 106134440 -14149872 - URR1A DNA MER1_type -21 205 37 2 1394 3485 49 2 0 chr13 106135166 106135596 -14148716 - L1Md_T LINE L1 -1 6581 6151 2 1394 1992 34 0 0 chr13 106135598 106135833 -14148479 + L1Md_T LINE L1 5927 6161 -421 2 1394 19697 55 6 0 chr13 106135825 106138958 -14145354 - L1Md_F2 LINE L1 -28 6554 3403 2 1394 543 227 66 36 chr13 106139307 106139444 -14144868 - B1_Mur1 SINE Alu -1 148 8 2 1394 21 36 0 0 chr13 106139473 106139501 -14144811 + AT_rich Low_complexity Low_complexity 1 28 0 2 1394 642 95 0 0 chr13 106139548 106139643 -14144669 + (TA)n Simple_repeat Simple_repeat 2 96 0 2 1394 246 114 100 0 chr13 106139847 106139917 -14144395 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 2 1394 384 259 0 143 chr13 106139936 106140062 -14144250 - RSINE1 SINE B4 -28 137 30 2 1394 2137 207 48 50 chr13 106141012 106141454 -14142858 - Lx6 LINE L1 -6 7454 7014 2 1394 3728 57 2 6 chr13 106141465 106141940 -14142372 - L1_Mus1 LINE L1 0 6567 6095 2 1394 2548 89 3 0 chr13 106141942 106142313 -14141999 + MusHAL1 LINE L1 1858 2229 -483 2 1394 5611 193 60 32 chr13 106142312 106144513 -14139799 - Lx6 LINE L1 -433 7027 4724 2 1394 554 131 0 0 chr13 106144504 106144588 -14139724 - Lx6 LINE L1 -2303 3577 3494 2 1394 938 281 8 16 chr13 106144609 106144859 -14139453 - Lx6 LINE L1 -26 7434 7187 2 1394 8054 166 43 20 chr13 106144859 106144952 -14139360 - L1_Mur3 LINE L1 -2552 3328 3235 2 1394 531 0 0 0 chr13 106144952 106145011 -14139301 + (TC)n Simple_repeat Simple_repeat 2 60 0 2 1394 8054 166 43 20 chr13 106145011 106146165 -14138147 - L1_Mur3 LINE L1 -2646 3234 2060 2 1394 381 22 0 0 chr13 106146165 106146211 -14138101 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1394 8054 166 43 20 chr13 106146211 106146696 -14137616 - L1_Mur3 LINE L1 -3821 2059 1559 2 1394 3716 162 29 3 chr13 106146696 106147320 -14136992 - Lx2B LINE L1 -4 6996 6357 2 1394 5150 142 47 4 chr13 106147320 106148635 -14135677 + Lx2B LINE L1 4988 6347 -653 2 1394 1959 208 155 48 chr13 106148626 106149565 -14134747 - L1_Mur3 LINE L1 -4309 1571 549 2 1394 343 368 57 30 chr13 106150113 106150343 -14133969 - L3 LINE CR1 -103 4386 4151 2 1394 233 246 46 0 chr13 106150401 106150466 -14133846 - MIRm SINE MIR -112 164 97 2 1394 1088 220 78 64 chr13 106151723 106152005 -14132307 - Lx7 LINE L1 -914 6782 6497 2 1394 247 300 100 0 chr13 106152241 106152301 -14132011 + tRNA-Ala-GCY_ tRNA tRNA 3 68 -7 2 1394 10077 149 22 52 chr13 106152591 106155443 -14128869 + Lx LINE L1 3914 6652 -2 2 1394 10002 50 1 1 chr13 106156287 106157529 -14126783 + L1Md_F3 LINE L1 4336 5577 -306 2 1394 8364 27 4 1 chr13 106157532 106158523 -14125789 + L1Md_F3 LINE L1 5587 6580 -4 2 1394 23 0 0 0 chr13 106158524 106158547 -14125765 + AT_rich Low_complexity Low_complexity 1 23 0 2 1394 489 47 0 0 chr13 106158904 106158968 -14125344 + (TATG)n Simple_repeat Simple_repeat 1 64 0 2 1394 772 315 65 36 chr13 106159020 106159297 -14125015 - B4A SINE B4 -5 287 3 2 1394 330 357 98 44 chr13 106159536 106159943 -14124369 + MLT1E2 LTR MaLR 145 498 -129 2 1394 23 0 0 0 chr13 106160804 106160827 -14123485 + AT_rich Low_complexity Low_complexity 1 23 0 2 1394 2410 191 13 17 chr13 106160943 106161421 -14122891 - Lx9 LINE L1 -405 7239 6764 2 1394 854 255 122 12 chr13 106161454 106161708 -14122604 - Lx9 LINE L1 -1045 6599 6318 2 1394 2411 233 87 19 chr13 106161779 106161820 -14122492 - Lx9 LINE L1 -19 5828 5783 2 1394 273 57 0 0 chr13 106161820 106161855 -14122457 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 2 1394 2411 233 87 19 chr13 106161855 106162505 -14121807 - Lx9 LINE L1 -65 5782 5091 2 1394 428 119 24 12 chr13 106162596 106162681 -14121631 + Lx9 LINE L1 7551 7636 -8 2 1394 623 100 67 39 chr13 106162708 106162812 -14121500 - BC1_Mm scRNA scRNA -45 107 1 2 1394 261 0 0 0 chr13 106162816 106162845 -14121467 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2 1394 352 309 58 40 chr13 106162851 106163204 -14121108 + L1M5 LINE L1 5396 5763 -401 2 1394 207 330 0 117 chr13 106163523 106163626 -14120686 + MIR SINE MIR 131 221 -41 2 1394 397 275 122 122 chr13 106163672 106164032 -14120280 + L1MA6 LINE L1 5766 6125 -175 2 1394 546 211 28 0 chr13 106164055 106164164 -14120148 + PB1D9 SINE Alu 3 114 -6 2 1394 261 0 0 0 chr13 106164955 106164984 -14119328 + (TGG)n Simple_repeat Simple_repeat 1 29 0 2 1394 320 268 23 61 chr13 106165569 106165700 -14118612 + L1MA4 LINE L1 5777 5902 -398 2 1394 28 0 0 0 chr13 106166007 106166035 -14118277 + AT_rich Low_complexity Low_complexity 1 28 0 2 1394 25 31 0 0 chr13 106167096 106167128 -14117184 + AT_rich Low_complexity Low_complexity 1 32 0 2 1394 315 0 0 0 chr13 106167159 106167194 -14117118 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1394 448 235 1 41 chr13 106167544 106167659 -14116653 - PB1 SINE Alu -12 115 3 2 174 909 268 154 48 chr13 106168023 106168748 -14115564 - L1M3 LINE L1 -933 5207 4406 2 1395 239 203 0 17 chr13 106168755 106168815 -14115497 + C-rich Low_complexity Low_complexity 1 59 0 2 1395 275 219 9 111 chr13 106168884 106168949 -14115363 + RSINE1 SINE B4 69 124 -41 2 1395 270 0 0 0 chr13 106168949 106168979 -14115333 + (TG)n Simple_repeat Simple_repeat 1 30 0 2 1395 275 219 9 111 chr13 106168979 106169021 -14115291 + RSINE1 SINE B4 125 164 -1 2 1395 668 288 112 19 chr13 106169026 106169728 -14114584 - L1M3 LINE L1 -2088 4052 3273 2 1395 3722 166 12 14 chr13 106169830 106170556 -14113756 + Lx3C LINE L1 5874 6598 -378 2 1395 707 139 24 0 chr13 106170573 106170739 -14113573 + (TG)n Simple_repeat Simple_repeat 2 171 0 2 1395 823 101 4 39 chr13 106170750 106171005 -14113307 + (TG)n Simple_repeat Simple_repeat 1 245 0 2 1395 402 171 17 35 chr13 106171408 106171523 -14112789 + Lx9 LINE L1 7405 7517 -127 2 1395 390 21 0 0 chr13 106171531 106171578 -14112734 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2 1395 492 117 0 0 chr13 106171586 106171663 -14112649 + (GGGA)n Simple_repeat Simple_repeat 4 80 0 2 1395 457 168 19 0 chr13 106171670 106171777 -14112535 + Lx9 LINE L1 7536 7644 0 2 1395 252 122 0 0 chr13 106171983 106172024 -14112288 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1395 555 341 23 17 chr13 106173237 106173410 -14110902 - B3A SINE B2 -24 174 1 2 1395 201 264 0 19 chr13 106173457 106173511 -14110801 + CT-rich Low_complexity Low_complexity 5 57 0 2 1395 4262 103 13 0 chr13 106175278 106175888 -14108424 + Lx2A LINE L1 6376 6993 -15 2 1395 1811 236 66 59 chr13 106175920 106176510 -14107802 + Lx9 LINE L1 6736 7329 -315 2 1395 247 167 0 53 chr13 106176556 106176613 -14107699 + Lx7 LINE L1 7051 7104 -592 2 1395 328 281 47 0 chr13 106176628 106176756 -14107556 + Lx7 LINE L1 7235 7368 -328 2 1395 1403 167 22 28 chr13 106176805 106177125 -14107187 + Lx7 LINE L1 7377 7694 -2 2 1395 422 258 106 92 chr13 106177133 106177436 -14106876 + Lx9 LINE L1 7316 7622 -22 2 1395 264 289 56 49 chr13 106177789 106177931 -14106381 + RMER15-int LTR ERVL 1935 2077 -2922 2 1395 229 344 31 0 chr13 106178144 106178240 -14106072 + Lx8 LINE L1 6192 6290 -1183 2 1395 1408 300 32 18 chr13 106178245 106178738 -14105574 + RMER15-int LTR ERVL 4252 4751 -248 2 1395 299 309 0 49 chr13 106178754 106178856 -14105456 + B4A SINE B4 195 291 -1 2 1395 368 135 14 0 chr13 106178906 106178980 -14105332 + (CA)n Simple_repeat Simple_repeat 2 76 0 2 1395 245 262 16 16 chr13 106180172 106180234 -14104078 + MLT1G1 LTR MaLR 56 117 -462 2 1395 495 0 0 0 chr13 106180249 106180304 -14104008 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 2 1395 359 182 0 13 chr13 106180306 106180384 -14103928 + (TA)n Simple_repeat Simple_repeat 1 77 0 2 1395 41 36 0 0 chr13 106181059 106181114 -14103198 + AT_rich Low_complexity Low_complexity 1 55 0 2 1395 6349 114 29 8 chr13 106181149 106182087 -14102225 - RMER17B LTR ERVK 0 958 1 2 1395 1253 76 41 0 chr13 106182525 106182697 -14101615 + B2_Mm2 SINE B2 1 179 -16 2 1395 1242 0 0 0 chr13 106182788 106182926 -14101386 + (TC)n Simple_repeat Simple_repeat 1 138 0 2 1395 952 186 58 5 chr13 106183023 106183212 -14101100 - URR1B DNA MER1_type -1 224 26 2 1395 283 305 28 71 chr13 106183869 106184010 -14100302 + MIRb SINE MIR 22 156 -112 2 1395 482 307 86 0 chr13 106184679 106184842 -14099470 + MER5A DNA MER1_type 7 183 -6 2 1395 536 264 244 39 chr13 106188078 106188385 -14095927 + ORR1D2 LTR MaLR 1 370 0 2 1395 572 343 12 61 chr13 106188824 106189069 -14095243 + RMER15 LTR ERVL 336 568 -7 2 1395 2798 208 105 24 chr13 106189406 106190137 -14094175 + RLTR40 LTR ERVK 24 813 -4 2 1395 305 288 0 0 chr13 106190976 106191042 -14093270 - tRNA-Ala-GCY_ tRNA tRNA -9 66 1 2 1395 1072 67 7 0 chr13 106192015 106192150 -14092162 + B1_Mus1 SINE Alu 1 136 -12 2 1395 546 16 0 0 chr13 106192165 106192228 -14092084 + (GA)n Simple_repeat Simple_repeat 2 64 0 2 1395 333 198 125 87 chr13 106192232 106192450 -14091862 + L1MA6 LINE L1 5686 5904 -396 2 1395 2384 157 55 11 chr13 106192453 106192886 -14091426 + RMER6B LTR ERVK 2 453 -8 2 1395 243 0 0 0 chr13 106192886 106192913 -14091399 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1395 692 317 41 3 chr13 106192916 106193261 -14091051 + L1MA6 LINE L1 5905 6262 -38 2 1395 2014 145 12 9 chr13 106193574 106193902 -14090410 + ORR1A4 LTR MaLR 1 329 0 2 1395 723 24 0 0 chr13 106193988 106194073 -14090239 + (GA)n Simple_repeat Simple_repeat 2 86 0 2 1395 189 0 0 0 chr13 106194707 106194728 -14089584 + (TA)n Simple_repeat Simple_repeat 1 21 0 2 1395 1195 263 35 37 chr13 106194786 106195161 -14089151 + MTEb LTR MaLR 6 379 0 2 1395 270 0 0 0 chr13 106195191 106195221 -14089091 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1395 233 363 72 8 chr13 106196602 106196727 -14087585 - MLT1M LTR MaLR -479 193 61 2 1395 571 60 24 0 chr13 106197857 106197941 -14086371 + (TC)n Simple_repeat Simple_repeat 1 86 0 2 1395 355 280 17 0 chr13 106197917 106198092 -14086220 + C-rich Low_complexity Low_complexity 3 180 0 2 1395 23 33 0 0 chr13 106198776 106198806 -14085506 + AT_rich Low_complexity Low_complexity 1 30 0 2 1395 1828 228 47 65 chr13 106198976 106199756 -14084556 - Lx9 LINE L1 -1683 5961 5162 2 1395 28 61 0 0 chr13 106201585 106201634 -14082678 + AT_rich Low_complexity Low_complexity 1 49 0 2 1395 315 314 61 28 chr13 106202790 106202937 -14081375 - B4 SINE B4 -75 217 70 2 1395 219 36 0 0 chr13 106202946 106202974 -14081338 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 2 1395 589 171 67 0 chr13 106202985 106203090 -14081222 - B1_Mur3 SINE Alu -25 124 13 2 1395 478 282 32 16 chr13 106203019 106203145 -14081167 - B4A SINE B4 -126 166 39 2 1395 239 338 0 0 chr13 106203145 106203225 -14081087 + (CA)n Simple_repeat Simple_repeat 2 81 0 2 1395 345 308 58 51 chr13 106203286 106203423 -14080889 - MIRb SINE MIR -91 177 40 2 1395 203 324 43 35 chr13 106203332 106203447 -14080865 - L4 LINE RTE -1593 436 321 2 1395 236 217 42 28 chr13 106203984 106204055 -14080257 + CT-rich Low_complexity Low_complexity 2 73 0 3 1395 301 236 153 0 chr13 106204139 106204211 -14080101 - B3 SINE B2 -57 159 77 3 1395 3871 168 18 4 chr13 106204241 106204258 -14080054 + Lx2B LINE L1 5132 5153 -724 3 1395 243 0 0 0 chr13 106204258 106204285 -14080027 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1395 8475 137 26 4 chr13 106204285 106206078 -14078234 + Lx2B LINE L1 5154 6993 -7 3 1395 27 0 0 0 chr13 106206105 106206132 -14078180 + AT_rich Low_complexity Low_complexity 1 27 0 3 1395 274 306 27 18 chr13 106206477 106206587 -14077725 - MIR3 SINE MIR 0 208 98 3 1395 316 350 16 16 chr13 106206877 106206999 -14077313 - LTR16C LTR ERVL 0 489 368 3 1395 1214 198 5 5 chr13 106207287 106207510 -14076802 - URR1B DNA MER1_type -2 223 1 3 1395 596 293 61 119 chr13 106207722 106208064 -14076248 - MTEb LTR MaLR -7 372 52 3 1395 1349 131 32 32 chr13 106208064 106208316 -14075996 - Lx LINE L1 -6 6648 6397 3 1395 596 293 61 119 chr13 106208316 106208368 -14075944 - MTEb LTR MaLR -328 51 1 3 1395 327 49 0 0 chr13 106208449 106208490 -14075822 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 3 1395 21 0 0 0 chr13 106209007 106209028 -14075284 + AT_rich Low_complexity Low_complexity 1 21 0 3 1395 803 181 14 0 chr13 106209035 106209173 -14075139 + B1_Mus2 SINE Alu 2 141 -6 3 1395 217 0 0 57 chr13 106209176 106209211 -14075101 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 3 1395 4070 219 59 17 chr13 106209506 106210468 -14073844 + Lx6 LINE L1 6457 7459 -1 3 1395 352 305 75 13 chr13 106210597 106210836 -14073476 + L1MC4 LINE L1 1170 1423 -4792 3 1395 344 248 19 9 chr13 106210894 106211000 -14073312 + L1MC4 LINE L1 1542 1648 -4567 3 1395 316 290 95 52 chr13 106211058 106211269 -14073043 + L1MC4 LINE L1 2139 2358 -3857 3 1395 350 303 10 46 chr13 106211525 106211719 -14072593 + L1MC4 LINE L1 7712 7898 -144 3 1395 564 284 12 41 chr13 106212061 106212230 -14072082 - RSINE1 SINE B4 0 165 2 3 1395 4715 67 19 9 chr13 106212309 106212942 -14071370 + L1_Mus4 LINE L1 5997 6635 -1 3 1395 486 49 0 0 chr13 106213568 106213629 -14070683 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 3 1395 273 29 0 0 chr13 106213629 106213663 -14070649 + (TC)n Simple_repeat Simple_repeat 2 35 0 3 1395 228 128 0 0 chr13 106213662 106213685 -14070627 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1395 1139 82 0 0 chr13 106213685 106213832 -14070480 - B1_Mus2 SINE Alu 0 147 1 3 1395 228 128 0 0 chr13 106213832 106213847 -14070465 + (T)n Simple_repeat Simple_repeat 1 15 0 3 1395 21 36 0 0 chr13 106214003 106214031 -14070281 + AT_rich Low_complexity Low_complexity 1 28 0 3 1395 1201 330 18 17 chr13 106214430 106214973 -14069339 + Lx8 LINE L1 6477 7020 -453 3 1395 225 160 19 57 chr13 106214975 106215028 -14069284 + Lx7 LINE L1 7049 7099 -597 3 1395 556 120 10 10 chr13 106215053 106215154 -14069158 + (GGAA)n Simple_repeat Simple_repeat 4 104 0 3 1395 943 141 0 22 chr13 106215264 106215446 -14068866 + CT-rich Low_complexity Low_complexity 3 180 0 3 1395 521 129 94 31 chr13 106216036 106216164 -14068148 + RMER3D-int LTR ERVK 2707 2842 0 3 1395 1259 153 0 9 chr13 106216164 106216381 -14067931 + RLTR17 LTR ERVK 1 215 -477 3 1395 270 303 150 11 chr13 106216413 106216600 -14067712 + Lx8 LINE L1 7261 7473 0 3 1395 227 279 23 102 chr13 106216649 106216737 -14067575 - ID4_ SINE ID -1 82 2 3 1395 891 145 250 0 chr13 106216984 106217156 -14067156 - B3 SINE B2 -1 215 1 3 1395 29 28 0 0 chr13 106217478 106217514 -14066798 + AT_rich Low_complexity Low_complexity 1 36 0 3 1395 189 94 0 0 chr13 106217842 106217874 -14066438 + (CAATA)n Simple_repeat Simple_repeat 2 33 0 3 1395 183 309 36 0 chr13 106218020 106218075 -14066237 + MIRc SINE MIR 79 135 -133 3 1395 636 14 0 0 chr13 106218594 106218667 -14065645 + (GAAAA)n Simple_repeat Simple_repeat 2 74 0 3 1395 1937 232 40 20 chr13 106219013 106219418 -14064894 - MTD LTR MaLR -5 414 2 3 1395 376 270 18 0 chr13 106219425 106219536 -14064776 - MTD-int LTR MaLR -7 1251 1139 3 1395 259 336 98 8 chr13 106220521 106220644 -14063668 + L2b LINE L2 3241 3374 -1 3 1395 2517 74 5 66 chr13 106221317 106221694 -14062618 + IAPEY2_LTR LTR ERVK 1 354 -3 3 1395 1151 188 9 13 chr13 106222607 106222834 -14061478 - URR1A DNA MER1_type 0 226 1 3 1395 310 359 20 20 chr13 106223020 106223168 -14061144 + MER5A1 DNA MER1_type 18 165 -1 3 1395 414 168 37 9 chr13 106224849 106224957 -14059355 + Lx9 LINE L1 7532 7642 -2 3 1395 30 59 0 0 chr13 106224974 106225025 -14059287 + AT_rich Low_complexity Low_complexity 1 51 0 3 1395 1020 276 83 32 chr13 106225047 106225361 -14058951 - MTE2a LTR MaLR -1 378 49 3 1395 229 237 116 22 chr13 106225365 106225503 -14058809 - Lx5 LINE L1 -885 6165 6015 3 1395 306 0 0 0 chr13 106225503 106225537 -14058775 + (CTA)n Simple_repeat Simple_repeat 3 36 0 3 1395 1552 202 103 47 chr13 106225603 106226029 -14058283 - RLTR20B3 LTR ERVK -105 472 23 3 1395 403 299 45 6 chr13 106226313 106226491 -14057821 - L1MC1 LINE L1 -29 6304 6120 3 1395 1288 312 52 14 chr13 106226492 106227253 -14057059 - MTE2b-int LTR MaLR -664 916 3 3 1395 1167 229 150 18 chr13 106227255 106227588 -14056724 - MTE2b LTR MaLR -1 378 2 3 1395 415 313 113 140 chr13 106227996 106228475 -14055837 - MLT1C LTR MaLR 0 467 2 3 1395 401 331 13 46 chr13 106228588 106228729 -14055583 + MER5A1 DNA MER1_type 13 148 -18 3 1395 268 285 77 82 chr13 106228729 106228924 -14055388 + B3 SINE B2 1 194 -1 3 1395 312 27 0 0 chr13 106229819 106229856 -14054456 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 3 1395 805 106 49 0 chr13 106229890 106230013 -14054299 - B2_Mm2 SINE B2 -66 129 1 3 1395 201 147 0 0 chr13 106230888 106230922 -14053390 + (ATG)n Simple_repeat Simple_repeat 3 36 0 3 1395 345 267 26 79 chr13 106230932 106231046 -14053266 - B1_Mur2 SINE Alu -41 108 1 3 1395 628 93 18 27 chr13 106232575 106232685 -14051627 - URR1B DNA MER1_type -6 219 111 3 1395 253 252 31 31 chr13 106233760 106233887 -14050425 + GA-rich Low_complexity Low_complexity 3 129 0 3 1395 243 188 0 0 chr13 106235596 106235644 -14048668 + (TGG)n Simple_repeat Simple_repeat 1 48 0 3 1395 198 103 0 0 chr13 106237691 106237720 -14046592 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 1395 418 141 0 40 chr13 106238316 106238390 -14045922 - B1_Mur1 SINE Alu -5 144 74 3 1395 608 140 0 21 chr13 106238464 106238559 -14045753 - B3 SINE B2 -123 93 1 3 1395 891 161 0 0 chr13 106238699 106238879 -14045433 + CT-rich Low_complexity Low_complexity 1 180 0 3 1395 1005 140 0 0 chr13 106238906 106239084 -14045228 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 3 1395 514 133 18 0 chr13 106239088 106239201 -14045111 + CT-rich Low_complexity Low_complexity 2 116 0 3 1395 210 71 0 0 chr13 106239502 106239530 -14044782 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1395 498 17 0 0 chr13 106239807 106239866 -14044446 + (TG)n Simple_repeat Simple_repeat 2 60 0 3 1395 255 122 0 0 chr13 106239903 106239952 -14044360 + (T)n Simple_repeat Simple_repeat 1 49 0 3 1395 673 180 117 0 chr13 106239956 106240084 -14044228 - B1_Mur4 SINE Alu -7 143 1 3 1395 1163 252 39 21 chr13 106241088 106241372 -14042940 - ORR1D2 LTR MaLR -81 289 1 3 1395 878 312 69 28 chr13 106242141 106242458 -14041854 - MLT1A0 LTR MaLR -23 342 13 3 1395 4414 67 5 2 chr13 106243528 106244095 -14040217 - L1_Mus2 LINE L1 0 6566 5998 3 1395 24 32 0 0 chr13 106244095 106244126 -14040186 + AT_rich Low_complexity Low_complexity 1 31 0 3 1395 6454 64 3 0 chr13 106244146 106245003 -14039309 - L1_Mus1 LINE L1 0 6654 5716 3 1395 4742 88 1 1 chr13 106245002 106245682 -14038630 + L1_Mus1 LINE L1 5077 5756 -127 3 1395 1753 91 11 0 chr13 106245679 106245942 -14038370 - L1_Mus2 LINE L1 -554 6012 5747 3 1395 5613 115 1 42 chr13 106245941 106246062 -14038250 - L1_Mus2 LINE L1 -486 5397 5304 3 1395 1160 81 0 0 chr13 106246062 106246210 -14038102 - B1_Mus1 SINE Alu 0 148 1 3 1395 5613 115 1 42 chr13 106246210 106246634 -14037678 - L1_Mus2 LINE L1 -580 5303 4879 3 1395 2924 31 6 0 chr13 106246634 106246986 -14037326 + L1Md_A LINE L1 6229 6582 0 3 1395 5613 115 1 42 chr13 106246986 106247405 -14036907 - L1_Mus2 LINE L1 -1005 4878 4472 3 1395 11654 108 4 6 chr13 106247398 106249294 -14035018 - MusHAL1 LINE L1 -546 2166 275 3 1395 325 229 95 42 chr13 106249713 106249865 -14034447 - L1MB7 LINE L1 -10 6174 6015 3 1395 1160 121 0 0 chr13 106250149 106250314 -14033998 - B2_Mm2 SINE B2 -22 173 9 3 1395 612 291 113 49 chr13 106250852 106251046 -14033266 - Lx7 LINE L1 -1672 5972 5754 3 1395 504 0 0 0 chr13 106251046 106251102 -14033210 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1395 207 0 0 0 chr13 106251102 106251124 -14033188 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1395 612 260 115 44 chr13 106251124 106251273 -14033039 - Lx7 LINE L1 -1943 5753 5610 3 1395 309 244 112 31 chr13 106251283 106251444 -14032868 - L1MB7 LINE L1 -360 5818 5645 3 1395 293 311 109 44 chr13 106251475 106251644 -14032668 + MTEa LTR MaLR 1 182 -197 3 1395 355 354 24 12 chr13 106252147 106252313 -14031999 + Lx8 LINE L1 7196 7363 -110 3 1395 266 67 22 0 chr13 106253171 106253216 -14031096 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1395 638 310 73 15 chr13 106255178 106255384 -14028928 + B4A SINE B4 2 219 -73 3 1395 5303 29 9 6 chr13 106255441 106256070 -14028242 + L1Md_F3 LINE L1 5950 6580 -4 3 1395 210 37 0 0 chr13 106256174 106256201 -14028111 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1395 627 349 49 59 chr13 106256284 106256656 -14027656 - ORR1E LTR MaLR 0 370 3 3 1395 1172 83 12 0 chr13 106256942 106257111 -14027201 + (TTTC)n Simple_repeat Simple_repeat 1 171 0 3 1395 755 306 159 12 chr13 106257362 106257689 -14026623 - MTE2b LTR MaLR -4 375 1 3 1395 1450 73 16 5 chr13 106257848 106258040 -14026272 - B2_Mm2 SINE B2 0 195 2 3 1395 405 39 0 0 chr13 106259111 106259162 -14025150 + (TC)n Simple_repeat Simple_repeat 2 52 0 3 1395 318 243 18 64 chr13 106259304 106259414 -14024898 + MLT2B2 LTR ERVL 20 124 -396 3 1395 558 29 0 0 chr13 106259745 106259813 -14024499 + (TG)n Simple_repeat Simple_repeat 2 69 0 3 1395 269 348 14 0 chr13 106259832 106259901 -14024411 - RSINE1 SINE B4 -15 150 81 3 1395 583 289 51 0 chr13 106260190 106260346 -14023966 + RSINE1 SINE B4 2 165 0 3 1395 360 0 0 0 chr13 106260350 106260390 -14023922 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 3 1395 342 335 37 66 chr13 106260506 106260760 -14023552 + L1MC4a LINE L1 5587 5836 -2046 3 1395 414 0 0 0 chr13 106260760 106260806 -14023506 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1395 448 322 21 0 chr13 106260815 106260958 -14023354 - RSINE1 SINE B4 -19 146 1 4 1395 342 329 29 91 chr13 106260958 106261020 -14023292 + L1MC4a LINE L1 5840 5899 -1983 3 1395 268 322 52 7 chr13 106261946 106262099 -14022213 - L1MD3 LINE L1 -81 7914 7755 4 1395 520 342 81 43 chr13 106262159 106262691 -14021621 - L1MC1 LINE L1 -371 6757 6206 4 1395 353 315 70 48 chr13 106262783 106263065 -14021247 - L1MC1 LINE L1 -2234 4707 4425 4 1395 2170 340 115 52 chr13 106263075 106264181 -14020131 + MTE-int LTR MaLR 1 1205 -375 4 1395 2193 105 15 58 chr13 106264181 106264524 -14019788 + ORR1A4 LTR MaLR 2 329 0 4 1395 2170 329 53 30 chr13 106264524 106264821 -14019491 + MTE-int LTR MaLR 1053 1454 -126 4 1395 225 328 30 46 chr13 106265389 106265520 -14018792 + B4A SINE B4 148 276 -16 4 1395 399 125 0 0 chr13 106265530 106265602 -14018710 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 1395 2385 106 141 12 chr13 106265602 106266022 -14018290 + IAPLTR2_Mm LTR ERVK 1 474 -1 4 1395 423 52 0 0 chr13 106266022 106266080 -14018232 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1395 290 262 62 12 chr13 106266131 106266212 -14018100 - L1M5 LINE L1 -2551 3595 3511 4 1395 28 48 0 0 chr13 106266220 106266262 -14018050 + AT_rich Low_complexity Low_complexity 1 42 0 4 1395 606 328 59 13 chr13 106266271 106266574 -14017738 - L1MC1 LINE L1 -2669 4272 3956 4 1395 441 322 103 55 chr13 106266706 106267517 -14016795 - L1MC1 LINE L1 -3187 3754 2905 4 1395 337 308 144 38 chr13 106268036 106268299 -14016013 - L1MC1 LINE L1 -4599 2438 2148 4 1395 185 125 0 70 chr13 106268333 106268376 -14015936 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 4 1395 364 281 386 74 chr13 106268376 106268552 -14015760 - B4A SINE B4 0 292 62 4 1395 309 311 75 0 chr13 106268694 106268800 -14015512 + MER20 DNA MER1_type 56 169 -50 4 1395 525 304 19 6 chr13 106268820 106268918 -14015394 + RMER30 DNA MER1_type 1 99 -103 4 1395 207 0 0 0 chr13 106268918 106268941 -14015371 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1395 525 304 19 6 chr13 106268941 106269004 -14015308 + RMER30 DNA MER1_type 100 163 -39 4 1395 437 304 9 0 chr13 106269002 106269114 -14015198 + MTD LTR MaLR 8 120 -299 4 1395 22 0 0 0 chr13 106269121 106269143 -14015169 + AT_rich Low_complexity Low_complexity 1 22 0 4 1395 1011 208 45 8 chr13 106269143 106269409 -14014903 - Lx3C LINE L1 -2 6974 6674 4 1395 310 318 58 66 chr13 106269411 106269437 -14014875 - L1MC1 LINE L1 -5067 1356 1332 4 1395 649 107 8 43 chr13 106269437 106269554 -14014758 - Lx LINE L1 -2 6652 6540 4 1395 310 318 58 66 chr13 106269554 106269753 -14014559 - L1MC1 LINE L1 -5092 1331 1133 4 1395 21 36 0 0 chr13 106270926 106270954 -14013358 + AT_rich Low_complexity Low_complexity 1 28 0 4 1395 23 78 0 0 chr13 106271446 106271497 -14012815 + AT_rich Low_complexity Low_complexity 1 51 0 4 1395 180 0 0 0 chr13 106272202 106272222 -14012090 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1395 439 276 43 43 chr13 106274738 106274757 -14009555 + ORR1E LTR MaLR 9 27 -332 4 1395 1531 246 58 42 chr13 106274757 106275254 -14009058 - RLTR16 LTR ERVK 0 505 1 4 1395 439 276 43 43 chr13 106275254 106275374 -14008938 + ORR1E LTR MaLR 28 148 -211 4 1395 755 80 26 0 chr13 106275378 106275491 -14008821 - URR1B DNA MER1_type -5 220 105 4 1395 21 36 0 0 chr13 106276092 106276120 -14008192 + AT_rich Low_complexity Low_complexity 1 28 0 4 1395 219 69 0 0 chr13 106276655 106276684 -14007628 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1395 3001 168 35 63 chr13 106276891 106277609 -14006703 - L1_Mur3 LINE L1 -714 5166 4469 4 1395 25 51 0 0 chr13 106278078 106278117 -14006195 + AT_rich Low_complexity Low_complexity 1 39 0 4 1395 404 343 88 56 chr13 106278257 106278473 -14005839 + MIR SINE MIR 3 225 -37 4 1395 342 324 56 0 chr13 106278498 106278606 -14005706 - MIR SINE MIR -101 161 48 4 1395 504 89 0 0 chr13 106278802 106278881 -14005431 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 1395 200 360 0 92 chr13 106280189 106280287 -14004025 - MIRb SINE MIR -8 260 172 4 1395 374 0 0 21 chr13 106280294 106280341 -14003971 + (TA)n Simple_repeat Simple_repeat 2 47 0 4 1395 576 307 169 49 chr13 106280584 106281056 -14003256 - L1MA4 LINE L1 -40 7433 6905 4 1395 319 336 19 63 chr13 106281056 106281165 -14003147 + Lx8 LINE L1 6600 6707 -766 4 1395 3450 23 2 0 chr13 106281165 106281560 -14002752 - MTA_Mm LTR MaLR 0 396 1 4 1395 9646 16 0 0 chr13 106281560 106282658 -14001654 - MTA_Mm-int LTR MaLR 0 1098 1 4 1395 3462 20 2 0 chr13 106282658 106283053 -14001259 - MTA_Mm LTR MaLR 0 396 1 4 1395 319 336 19 63 chr13 106283053 106283100 -14001212 + Lx8 LINE L1 6708 6749 -724 4 1395 297 0 0 0 chr13 106283175 106283208 -14001104 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1395 698 291 91 36 chr13 106283215 106283332 -14000980 - B4A SINE B4 0 292 171 4 1395 5537 118 8 62 chr13 106283332 106284285 -14000027 - RLTR13D6 LTR ERVK 0 902 1 4 1395 698 291 91 36 chr13 106284285 106284442 -13999870 - B4A SINE B4 -122 170 3 4 1395 516 93 0 0 chr13 106284580 106284655 -13999657 + (TA)n Simple_repeat Simple_repeat 2 76 0 4 1395 7013 109 30 1 chr13 106284655 106286303 -13998009 - L1_Mus3 LINE L1 -5 6633 4938 4 1395 9663 118 18 10 chr13 106286306 106287838 -13996474 + L1_Mus3 LINE L1 3334 4878 -1005 4 1395 1006 300 65 50 chr13 106288973 106289370 -13994942 - MTD LTR MaLR -16 403 1 4 1395 24 67 0 0 chr13 106289455 106289500 -13994812 + AT_rich Low_complexity Low_complexity 1 45 0 4 1395 32 43 0 0 chr13 106289612 106289658 -13994654 + AT_rich Low_complexity Low_complexity 1 46 0 4 1395 755 293 49 5 chr13 106289797 106290138 -13994174 - L1MA4 LINE L1 -1553 5920 5593 4 1395 368 295 165 43 chr13 106291885 106292140 -13992172 + L1ME3 LINE L1 5610 5895 -267 4 1395 469 248 104 68 chr13 106292622 106292843 -13991469 + ORR1C1 LTR MaLR 17 245 -133 4 1395 1256 162 16 8 chr13 106292843 106293085 -13991227 - Lx2 LINE L1 -733 6264 6021 4 1395 4002 117 8 7 chr13 106293101 106293697 -13990615 + Lx LINE L1 6051 6647 -7 4 1395 234 0 0 0 chr13 106293721 106293747 -13990565 + (A)n Simple_repeat Simple_repeat 1 26 0 4 1395 351 0 0 0 chr13 106293756 106293795 -13990517 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 4 1395 2028 175 74 25 chr13 106293795 106294187 -13990125 + RMER19C LTR ERVK 201 611 0 4 1395 27539 119 26 7 chr13 106294272 106295762 -13988550 + L1_Mus3 LINE L1 549 2071 -3812 4 1395 234 0 0 0 chr13 106295762 106295788 -13988524 + (CAA)n Simple_repeat Simple_repeat 3 28 0 4 1395 27539 140 9 7 chr13 106295788 106297481 -13986831 + L1_Mus3 LINE L1 2072 3760 -2123 4 1395 671 264 51 42 chr13 106297481 106297837 -13986475 - RLTR10D LTR ERVK 0 359 1 4 174 27539 129 33 6 chr13 106297837 106300626 -13983686 + L1_Mus3 LINE L1 3761 6632 -6 4 1396 7226 109 5 5 chr13 106300648 106301766 -13982546 + MusHAL1 LINE L1 184 1300 -1412 4 1396 6718 138 11 16 chr13 106301771 106303150 -13981162 + Lx2 LINE L1 5262 6645 -352 4 1396 1197 145 12 56 chr13 106303139 106303388 -13980924 + Lx LINE L1 6417 6654 0 4 1396 24 0 0 0 chr13 106305894 106305918 -13978394 + AT_rich Low_complexity Low_complexity 1 24 0 4 1396 2152 67 33 20 chr13 106306175 106306478 -13977834 - IAPLTR2b LTR ERVK -20 307 1 4 1396 944 237 5 16 chr13 106306563 106306752 -13977560 + RMER19B LTR ERVK 119 305 -597 4 1396 5629 106 66 6 chr13 106306757 106306966 -13977346 + Lx3_Mus LINE L1 5946 6201 -808 4 1396 183 42 0 0 chr13 106306966 106306990 -13977322 + (G)n Simple_repeat Simple_repeat 1 24 0 4 1396 5629 106 66 6 chr13 106306990 106307672 -13976640 + Lx3_Mus LINE L1 6202 6891 -118 4 1396 978 256 87 12 chr13 106308010 106308263 -13976049 + B4A SINE B4 1 272 -20 4 1396 285 89 0 0 chr13 106308305 106308350 -13975962 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1396 186 133 0 0 chr13 106308358 106308388 -13975924 + (GGGA)n Simple_repeat Simple_repeat 3 32 0 4 1396 378 198 101 34 chr13 106310151 106310240 -13974072 - MLT1A1 LTR MaLR -44 364 270 4 1396 303 28 0 0 chr13 106310375 106310411 -13973901 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1396 290 91 18 0 chr13 106310411 106310466 -13973846 + (GA)n Simple_repeat Simple_repeat 1 56 0 4 1396 25 0 0 0 chr13 106310785 106310810 -13973502 + AT_rich Low_complexity Low_complexity 1 25 0 4 1396 233 57 0 28 chr13 106311340 106311376 -13972936 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 4 1396 1458 224 116 3 chr13 106311376 106311694 -13972618 - MTD LTR MaLR -53 366 13 4 1396 293 344 6 179 chr13 106311708 106311864 -13972448 - B4 SINE B4 -131 161 33 4 1396 1421 54 29 5 chr13 106311866 106312142 -13972170 - L1Md_F2 LINE L1 0 6582 6374 4 1396 21 36 0 0 chr13 106312836 106312864 -13971448 + AT_rich Low_complexity Low_complexity 1 28 0 4 1396 486 0 0 0 chr13 106313089 106313143 -13971169 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1396 1652 219 52 30 chr13 106313628 106314033 -13970279 + RLTR40 LTR ERVK 1 414 -403 4 1396 264 321 94 29 chr13 106314124 106314262 -13970050 - LTR52 LTR ERVL -267 154 8 4 1396 22 35 0 0 chr13 106315195 106315224 -13969088 + AT_rich Low_complexity Low_complexity 1 29 0 4 1396 29 70 0 0 chr13 106315283 106315340 -13968972 + AT_rich Low_complexity Low_complexity 1 57 0 4 1396 21 36 0 0 chr13 106315430 106315458 -13968854 + AT_rich Low_complexity Low_complexity 1 28 0 4 1396 4205 70 4 6 chr13 106315514 106316062 -13968250 - L1Md_F2 LINE L1 -12 6570 6024 4 1396 2132 75 58 0 chr13 106316073 106316365 -13967947 + L1Md_F2 LINE L1 5278 5586 -297 4 1396 5920 99 60 8 chr13 106316366 106317311 -13967001 + L1Md_F2 LINE L1 5588 6581 -1 4 1396 2669 159 51 16 chr13 106317411 106317921 -13966391 - RLTR11A LTR ERVK 0 528 1 4 1396 25 0 0 0 chr13 106318281 106318306 -13966006 + AT_rich Low_complexity Low_complexity 1 25 0 4 1396 708 154 0 0 chr13 106318659 106318782 -13965530 + (TA)n Simple_repeat Simple_repeat 1 123 0 4 1396 589 298 52 120 chr13 106318795 106319119 -13965193 + MER67D LTR ERV1 69 370 -144 4 1396 280 352 71 9 chr13 106319262 106319474 -13964838 + Charlie11 DNA MER1_type 801 1025 -1171 4 1396 796 299 9 0 chr13 106320009 106320220 -13964092 - B3 SINE B2 -1 215 3 4 1396 189 0 0 0 chr13 106320810 106320831 -13963481 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 4 1396 452 361 29 6 chr13 106320843 106321013 -13963299 + MER5A DNA MER1_type 15 188 -1 4 1396 446 304 143 58 chr13 106321205 106321463 -13962849 - B4 SINE B4 0 292 13 4 1396 566 296 46 5 chr13 106321564 106321781 -13962531 + Charlie11 DNA MER1_type 1365 1590 -606 4 1396 659 233 43 83 chr13 106321906 106322182 -13962130 - MER92B LTR ERV1 -9 627 363 4 1396 769 255 89 29 chr13 106322222 106322468 -13961844 - MER92B LTR ERV1 -370 266 6 4 1396 301 202 30 181 chr13 106322637 106322770 -13961542 - MER67C LTR ERV1 -5 706 594 4 1396 354 306 43 43 chr13 106322778 106322802 -13961510 + B4 SINE B4 65 204 -88 4 1396 651 191 9 9 chr13 106322802 106322918 -13961394 + B1_Mur4 SINE Alu 1 116 -34 4 1396 288 0 0 0 chr13 106322919 106322951 -13961361 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1396 441 0 0 0 chr13 106322951 106322999 -13961313 + (GA)n Simple_repeat Simple_repeat 2 50 0 4 1396 7769 55 11 0 chr13 106323085 106324056 -13960256 - L1Md_F2 LINE L1 -14 6568 5587 4 1396 18245 77 2 0 chr13 106324078 106326533 -13957779 + L1_Mm LINE L1 2942 5400 -483 5 1396 1477 294 52 29 chr13 106326535 106327015 -13957297 - Lx6 LINE L1 -8 7452 6962 5 1396 543 298 66 35 chr13 106327090 106327347 -13956965 - MER67C LTR ERV1 -200 511 247 4 1396 310 304 38 0 chr13 106327646 106327725 -13956587 - MER21B LTR ERV1 -280 583 502 5 1396 428 282 40 57 chr13 106327805 106327929 -13956383 - PB1 SINE Alu -5 122 1 5 1396 1192 298 53 6 chr13 106328078 106328416 -13955896 - MER21B LTR ERV1 -496 367 14 5 1396 551 294 84 18 chr13 106328440 106328525 -13955787 - MER67C LTR ERV1 -468 243 159 4 1396 720 165 23 47 chr13 106328525 106328697 -13955615 + Lx2B LINE L1 6833 7000 0 5 1396 551 294 84 18 chr13 106328697 106328836 -13955476 - MER67C LTR ERV1 -553 158 4 4 1396 24 0 0 0 chr13 106328968 106328992 -13955320 + AT_rich Low_complexity Low_complexity 1 24 0 5 1396 304 323 25 202 chr13 106329370 106329568 -13954744 - RSINE1 SINE B4 0 165 3 5 1396 276 313 0 0 chr13 106329603 106329670 -13954642 + RSINE1 SINE B4 4 70 -95 5 1396 360 0 0 0 chr13 106329706 106329746 -13954566 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1396 1635 195 60 57 chr13 106329810 106330179 -13954133 + ORR1C1 LTR MaLR 1 370 -8 5 1396 21 0 0 0 chr13 106330998 106331019 -13953293 + AT_rich Low_complexity Low_complexity 1 21 0 5 1396 359 266 9 18 chr13 106332405 106332516 -13951796 + L1MA6 LINE L1 6128 6237 -63 5 1396 737 306 92 4 chr13 106333469 106333718 -13950594 + B4A SINE B4 3 273 -19 5 1396 278 299 44 15 chr13 106334629 106334765 -13949547 - L1MC4 LINE L1 -145 7897 7758 5 1396 541 360 97 26 chr13 106335669 106335937 -13948375 + B4A SINE B4 5 291 -1 5 1396 575 314 86 41 chr13 106336152 106336402 -13947910 + MER2 DNA MER2_type 25 290 -55 5 1396 1910 139 62 41 chr13 106336402 106336792 -13947520 + RMER10B LTR ERVL 1 398 0 5 1396 575 314 86 41 chr13 106336792 106336833 -13947479 + MER2 DNA MER2_type 291 329 -16 5 1396 479 345 81 55 chr13 106338230 106338577 -13945735 + MLT1A0 LTR MaLR 2 357 -8 5 1396 3090 203 103 44 chr13 106340843 106341668 -13942644 + RMER13B LTR ERVK 1 874 -34 5 1396 363 44 0 0 chr13 106343372 106343417 -13940895 + (TA)n Simple_repeat Simple_repeat 2 46 0 5 1396 40 21 0 0 chr13 106344017 106344064 -13940248 + AT_rich Low_complexity Low_complexity 1 47 0 5 1396 852 224 49 15 chr13 106344069 106344273 -13940039 - B3 SINE B2 0 216 6 5 1396 22 35 0 0 chr13 106344288 106344317 -13939995 + AT_rich Low_complexity Low_complexity 1 29 0 5 1396 1201 61 0 0 chr13 106344907 106345054 -13939258 + B1_Mus2 SINE Alu 1 147 0 5 1396 180 0 0 0 chr13 106345054 106345074 -13939238 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1396 202 319 14 0 chr13 106345237 106345306 -13939006 + MIR SINE MIR 117 186 -76 5 1396 448 315 116 67 chr13 106345352 106345406 -13938906 + L1MA5 LINE L1 5522 5582 -718 5 1396 7341 59 15 8 chr13 106345406 106346349 -13937963 + L1Md_F2 LINE L1 5622 6570 -12 5 1396 501 317 116 62 chr13 106346349 106347009 -13937303 + L1MA5 LINE L1 5583 6274 -26 5 1396 198 0 0 0 chr13 106347110 106347132 -13937180 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1396 965 333 26 29 chr13 106347870 106348452 -13935860 - L1_Mur3 LINE L1 -609 5271 4692 5 1396 423 254 27 0 chr13 106351198 106351308 -13933004 + PB1D9 SINE Alu 5 117 -3 5 1396 1956 165 75 48 chr13 106351718 106352118 -13932194 - MTC LTR MaLR -5 416 6 5 1396 730 287 28 80 chr13 106352374 106352586 -13931726 + B4A SINE B4 4 204 -88 5 1396 4966 169 25 31 chr13 106354010 106354917 -13929395 + RMER19B LTR ERVK 1 902 0 5 1396 300 293 50 0 chr13 106354924 106355023 -13929289 - Lx8 LINE L1 -415 7058 6955 5 1396 490 29 29 0 chr13 106355205 106355273 -13929039 + (GA)n Simple_repeat Simple_repeat 1 70 0 5 1396 707 255 0 0 chr13 106356779 106356928 -13927384 + B1_Mur4 SINE Alu 2 150 0 5 1396 302 344 164 12 chr13 106357012 106357256 -13927056 - L2 LINE L2 -688 2731 2451 5 1396 186 71 0 0 chr13 106359553 106359581 -13924731 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 5 1396 1281 80 0 0 chr13 106360992 106361167 -13923145 + (TTC)n Simple_repeat Simple_repeat 2 176 0 5 1396 212 244 22 0 chr13 106361169 106361214 -13923098 + C-rich Low_complexity Low_complexity 6 51 0 5 1396 310 300 12 12 chr13 106361234 106361315 -13922997 - ID4 SINE ID -2 81 1 5 1396 1274 164 11 62 chr13 106361868 106362141 -13922171 + L1_Mus3 LINE L1 6373 6631 -7 5 1396 330 26 0 0 chr13 106362160 106362199 -13922113 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1396 1523 217 3 16 chr13 106362773 106363092 -13921220 - MTC LTR MaLR 0 421 107 5 1396 578 264 8 30 chr13 106363095 106363228 -13921084 + B1_Mur2 SINE Alu 9 138 -11 5 1396 971 79 12 12 chr13 106363228 106363394 -13920918 + (CA)n Simple_repeat Simple_repeat 2 167 0 5 1396 553 239 0 0 chr13 106363402 106363519 -13920793 - MTC LTR MaLR -304 117 1 5 1396 22 70 0 0 chr13 106363708 106363751 -13920561 + AT_rich Low_complexity Low_complexity 1 43 0 5 1396 5121 62 64 22 chr13 106363921 106364635 -13919677 - L1Md_F2 LINE L1 -13 6569 5826 5 1396 1093 88 7 0 chr13 106364773 106364920 -13919392 + B1_Mus1 SINE Alu 1 148 0 5 1396 2074 43 4 0 chr13 106365915 106366171 -13918141 + L1Md_F2 LINE L1 6326 6582 0 5 1396 235 276 193 11 chr13 106366197 106366285 -13918027 - MLT1A1 LTR MaLR -3 405 302 5 1396 226 320 40 40 chr13 106366450 106366551 -13917761 - MLT1A1 LTR MaLR -269 139 39 5 1396 522 296 78 34 chr13 106366836 106367042 -13917270 - B3 SINE B2 0 216 2 5 1396 3586 190 26 5 chr13 106367429 106368198 -13916114 - L1Md_A LINE L1 -5873 1213 446 5 1396 309 220 128 20 chr13 106368204 106368306 -13916006 - L1M2 LINE L1 -2361 3782 3670 5 1396 248 0 0 30 chr13 106368658 106368691 -13915621 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 5 1396 1224 256 0 4 chr13 106368937 106369200 -13915112 + Lx9 LINE L1 6483 6744 -900 5 1396 3031 44 0 0 chr13 106369540 106369904 -13914408 + L1_Mus1 LINE L1 6204 6567 0 5 1396 295 296 120 43 chr13 106370062 106370246 -13914066 - Lx7 LINE L1 -12 7684 7487 5 1396 487 0 32 0 chr13 106370250 106370313 -13913999 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1396 1479 277 39 112 chr13 106370313 106370469 -13913843 - Lx7 LINE L1 -386 7310 7186 5 1396 1139 63 0 0 chr13 106370469 106370612 -13913700 - B1_Mm SINE Alu 0 147 5 5 1396 1479 277 39 112 chr13 106370612 106371126 -13913186 - Lx7 LINE L1 -511 7185 6689 5 1396 629 304 77 0 chr13 106371131 106371338 -13912974 + Lx7 LINE L1 6392 6614 -1082 5 1396 415 327 30 17 chr13 106372672 106372902 -13911410 - L1M5 LINE L1 -759 5387 5155 5 1396 209 122 0 24 chr13 106373720 106373762 -13910550 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 5 1396 189 0 0 0 chr13 106374170 106374191 -13910121 + (TCTG)n Simple_repeat Simple_repeat 4 24 0 5 1396 586 166 25 0 chr13 106374192 106374355 -13909957 + (TCTA)n Simple_repeat Simple_repeat 2 168 0 5 1396 364 158 40 27 chr13 106374430 106374580 -13909732 + (TCTCTG)n Simple_repeat Simple_repeat 3 154 0 5 1396 1194 72 22 6 chr13 106375655 106375836 -13908476 - L1_Mus3 LINE L1 -7 6631 6448 5 1396 192 302 65 19 chr13 106375879 106375987 -13908325 + MIR SINE MIR 119 231 -31 5 1396 1706 184 89 3 chr13 106376269 106376607 -13907705 - ORR1B2 LTR MaLR 0 367 1 5 1396 883 334 14 42 chr13 106377660 106378016 -13906296 - MER82 DNA MER2_type -1 652 307 5 1396 315 0 0 0 chr13 106378016 106378051 -13906261 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 5 1396 16673 96 229 18 chr13 106378093 106382376 -13901936 + L1VL1 LINE L1 224 5454 -429 5 1396 3468 71 69 0 chr13 106382376 106382522 -13901790 + L1Md_F2 LINE L1 5063 5234 -649 5 1396 333 0 0 0 chr13 106382522 106382559 -13901753 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1396 3468 71 69 0 chr13 106382559 106382902 -13901410 + L1Md_F2 LINE L1 5235 5585 -298 5 1396 7382 77 3 4 chr13 106382902 106383899 -13900413 + L1Md_F2 LINE L1 5587 6582 0 5 1396 614 272 24 43 chr13 106384043 106384478 -13899834 + L1M3 LINE L1 3894 4404 -1739 5 1396 23 0 0 0 chr13 106384984 106385007 -13899305 + AT_rich Low_complexity Low_complexity 1 23 0 5 1396 327 132 0 62 chr13 106385059 106385156 -13899156 + CT-rich Low_complexity Low_complexity 1 91 0 5 1396 255 79 0 0 chr13 106385184 106385222 -13899090 + (TG)n Simple_repeat Simple_repeat 1 38 0 5 1396 23 54 0 0 chr13 106385489 106385526 -13898786 + AT_rich Low_complexity Low_complexity 1 37 0 5 1396 311 299 20 10 chr13 106386348 106386446 -13897866 - B1F2 SINE Alu -50 99 1 5 1396 303 263 9 57 chr13 106386524 106386629 -13897683 - MER3 DNA MER1_type 0 209 110 5 1396 216 24 48 24 chr13 106387335 106387377 -13896935 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 5 1396 26 64 0 0 chr13 106389459 106389506 -13894806 + AT_rich Low_complexity Low_complexity 1 47 0 5 1396 21 0 0 0 chr13 106389676 106389697 -13894615 + AT_rich Low_complexity Low_complexity 1 21 0 5 1396 1459 174 21 11 chr13 106390864 106391143 -13893169 - Lx LINE L1 -4 6650 6369 5 1396 1413 251 35 8 chr13 106391146 106391516 -13892796 + Lx7 LINE L1 7019 7398 -298 5 1396 29 0 0 0 chr13 106392965 106392994 -13891318 + AT_rich Low_complexity Low_complexity 1 29 0 5 1396 264 315 54 11 chr13 106392999 106393115 -13891197 + MIRc SINE MIR 41 168 -108 5 1396 374 256 0 24 chr13 106393165 106393184 -13891128 - RSINE1 SINE B4 -80 85 67 5 1396 315 0 0 0 chr13 106393184 106393219 -13891093 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1396 374 256 0 24 chr13 106393219 106393283 -13891029 - RSINE1 SINE B4 -99 66 4 5 1396 794 254 63 58 chr13 106393663 106394073 -13890239 - Lx7 LINE L1 0 7696 7285 5 1396 335 247 30 54 chr13 106394095 106394262 -13890050 + Lx6 LINE L1 5962 6124 -1336 5 1396 1753 180 20 5 chr13 106394263 106394659 -13889653 - L1_Mur3 LINE L1 -1445 4435 4034 5 1396 180 0 0 0 chr13 106395168 106395188 -13889124 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 5 1396 213 39 0 0 chr13 106397282 106397308 -13887004 + (CA)n Simple_repeat Simple_repeat 1 26 0 5 1396 2449 286 72 22 chr13 106397703 106398638 -13885674 + Lx9 LINE L1 6301 7281 -363 5 1396 13277 16 0 0 chr13 106398896 106401219 -13883093 - L1Md_T LINE L1 0 6582 4260 5 1396 3690 74 37 0 chr13 106401504 106401991 -13882321 - L1_Mus1 LINE L1 0 6567 6063 5 1396 216 262 45 63 chr13 106402151 106402248 -13882064 + MIR SINE MIR 117 219 -49 5 1396 251 306 0 30 chr13 106402538 106402600 -13881712 - Lx9 LINE L1 -127 7517 7460 5 1396 315 0 0 0 chr13 106402600 106402635 -13881677 + (TATG)n Simple_repeat Simple_repeat 2 36 0 6 1396 251 306 0 30 chr13 106402635 106402737 -13881575 - Lx9 LINE L1 -185 7459 7358 5 1396 3943 197 60 59 chr13 106402763 106403734 -13880578 - RLTR13C1 LTR ERVK -11 972 1 6 1396 1276 314 31 56 chr13 106403735 106404339 -13879973 - Lx9 LINE L1 -299 7345 6757 5 1396 292 284 24 12 chr13 106404512 106404594 -13879718 + RCHARR1 DNA MER1_type 239 321 -653 6 1396 210 118 0 0 chr13 106404612 106404646 -13879666 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1396 1793 285 19 27 chr13 106404663 106405291 -13879021 + RCHARR1 DNA MER1_type 330 952 -22 6 1396 9095 16 3 2 chr13 106406402 106407530 -13876782 - L1_Mm LINE L1 -1782 4101 2972 6 1396 6651 39 0 0 chr13 106407530 106408328 -13875984 + L1Md_A LINE L1 5785 6582 0 6 1396 238 288 50 0 chr13 106408417 106408497 -13875815 + MER2 DNA MER2_type 160 243 -102 6 1396 547 250 27 0 chr13 106408700 106408812 -13875500 - ID_B1 SINE B4 -2 222 108 6 1396 375 319 64 21 chr13 106408812 106408836 -13875476 - B1F1 SINE Alu 0 144 3 6 1396 1835 109 3 115 chr13 106409402 106409766 -13874546 - Lx LINE L1 -4 6650 6328 6 1396 284 280 29 48 chr13 106409858 106409963 -13874349 - B1F1 SINE Alu 0 117 15 6 1396 527 311 11 101 chr13 106410146 106410300 -13874012 - RSINE1 SINE B4 0 165 23 6 1396 1183 165 32 5 chr13 106410300 106410519 -13873793 - URR1B DNA MER1_type 0 225 1 6 1396 527 311 11 101 chr13 106410519 106410543 -13873769 - RSINE1 SINE B4 -143 22 3 6 1396 4055 181 69 24 chr13 106411036 106411859 -13872453 - RMER13A LTR ERVK 0 860 1 6 1396 1747 249 3 8 chr13 106413440 106413816 -13870496 - ORR1D1 LTR MaLR 0 374 1 6 1396 423 0 0 0 chr13 106413937 106413984 -13870328 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1396 182 412 0 0 chr13 106414593 106414661 -13869651 - MIR SINE MIR -182 80 13 6 1396 429 20 0 0 chr13 106414793 106414843 -13869469 + (TC)n Simple_repeat Simple_repeat 2 51 0 6 1396 295 187 11 21 chr13 106414858 106414951 -13869361 + CT-rich Low_complexity Low_complexity 3 94 0 6 1396 477 206 6 25 chr13 106414985 106415144 -13869168 + CT-rich Low_complexity Low_complexity 1 156 0 6 1396 587 189 108 16 chr13 106415566 106415695 -13868617 - B1_Mur4 SINE Alu -5 145 5 6 1396 491 285 78 13 chr13 106415854 106416094 -13868218 + L1MA6 LINE L1 6045 6295 -8 6 1396 471 18 0 0 chr13 106416499 106416555 -13867757 + (TG)n Simple_repeat Simple_repeat 1 56 0 6 1396 900 93 0 0 chr13 106416555 106416704 -13867608 + (GA)n Simple_repeat Simple_repeat 1 150 0 6 1396 214 289 102 96 chr13 106417019 106417176 -13867136 + MIRc SINE MIR 1 158 -110 6 1396 200 267 0 0 chr13 106417278 106417323 -13866989 + CT-rich Low_complexity Low_complexity 3 47 0 6 1396 294 125 21 0 chr13 106417633 106417681 -13866631 + MTD LTR MaLR 6 54 -365 6 1396 1050 252 46 19 chr13 106417686 106417993 -13866319 + Lx5 LINE L1 6736 7050 0 6 1396 1219 224 84 45 chr13 106418003 106418081 -13866231 + MTD LTR MaLR 70 143 -276 6 1396 5683 150 19 12 chr13 106418081 106419032 -13865280 + RMER17B LTR ERVK 1 958 0 6 1396 1219 224 84 45 chr13 106419032 106419285 -13865027 + MTD LTR MaLR 144 414 -5 6 1396 1952 93 124 0 chr13 106419308 106419599 -13864713 - ORR1A2 LTR MaLR 0 327 1 6 1396 249 391 21 46 chr13 106419654 106419895 -13864417 - L2 LINE L2 -359 3060 2826 6 1396 624 62 0 0 chr13 106420192 106420273 -13864039 + (GGA)n Simple_repeat Simple_repeat 2 82 0 6 1396 495 0 0 0 chr13 106420283 106420338 -13863974 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1396 222 91 0 0 chr13 106420400 106420433 -13863879 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1396 677 251 31 36 chr13 106420434 106420628 -13863684 - Lx7 LINE L1 -336 7360 7168 6 1396 603 0 0 0 chr13 106420960 106421027 -13863285 + (GA)n Simple_repeat Simple_repeat 2 68 0 6 1396 224 378 39 23 chr13 106421367 106421497 -13862815 + L2a LINE L2 3048 3179 -247 6 1396 207 0 0 0 chr13 106424192 106424215 -13860097 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1396 261 139 0 0 chr13 106424426 106424469 -13859843 + (TCC)n Simple_repeat Simple_repeat 3 45 0 6 1396 1319 97 11 0 chr13 106424508 106424694 -13859618 - L1_Mus1 LINE L1 -1 6566 6379 6 1396 1813 160 22 138 chr13 106424788 106425202 -13859110 + ORR1B1 LTR MaLR 19 384 -10 6 1396 688 222 1 82 chr13 106425340 106425604 -13858708 - Lx3B LINE L1 -3 6978 6746 6 1396 2482 120 41 10 chr13 106425733 106426121 -13858191 + RLTR9D LTR ERVK 1 400 -3 6 1396 253 274 0 0 chr13 106426520 106426593 -13857719 - Lx9 LINE L1 -491 7153 7081 6 1396 1658 236 100 15 chr13 106426592 106426989 -13857323 + L1_Rod LINE L1 4561 4984 -863 6 1396 434 70 14 0 chr13 106426989 106427060 -13857252 + (CAA)n Simple_repeat Simple_repeat 2 73 0 6 1396 1658 236 100 15 chr13 106427060 106427273 -13857039 + L1_Rod LINE L1 4985 5222 -625 6 1396 5675 85 34 0 chr13 106427326 106428150 -13856162 - L1_Mus1 LINE L1 0 6567 5716 6 1396 1461 96 5 0 chr13 106428149 106428368 -13855944 + L1_Mm LINE L1 5077 5296 -587 6 174 23526 124 11 38 chr13 106428365 106433209 -13851103 - L1_Mus1 LINE L1 -707 5176 467 6 1397 227 217 14 28 chr13 106433241 106433312 -13851000 - L1Md_F LINE L1 -5776 743 674 6 1397 638 254 64 28 chr13 106433315 106433566 -13850746 - L1VL1 LINE L1 -5926 496 226 6 1397 8430 12 0 0 chr13 106434177 106435774 -13848538 - L1Md_A LINE L1 -1 6581 4985 6 1397 1135 88 0 7 chr13 106435828 106435976 -13848336 + B1_Mm SINE Alu 1 147 0 6 1397 493 93 59 0 chr13 106435976 106436094 -13848218 + A-rich Low_complexity Low_complexity 1 125 0 6 1397 651 203 7 53 chr13 106436276 106436427 -13847885 + Lx9 LINE L1 7012 7155 -489 6 1397 198 91 0 0 chr13 106436578 106436611 -13847701 + (CAAAT)n Simple_repeat Simple_repeat 2 34 0 6 1397 1312 304 56 23 chr13 106436750 106437553 -13846759 + RMER1B Other Other 1 566 -500 6 1397 717 198 149 41 chr13 106437553 106437748 -13846564 + RMER1A Other Other 320 535 -495 6 1397 893 123 88 6 chr13 106437745 106437916 -13846396 + RMER1A Other Other 831 1015 -15 6 1397 738 247 16 10 chr13 106437929 106438121 -13846191 + Lx9 LINE L1 7145 7337 -307 6 1397 375 304 48 18 chr13 106439734 106439962 -13844350 + L1MEc LINE L1 40 274 -6126 6 1397 198 178 13 52 chr13 106440772 106440849 -13843463 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 6 1397 495 286 14 0 chr13 106441565 106441705 -13842607 + B1F SINE Alu 1 142 -7 6 1397 749 238 35 14 chr13 106441729 106441874 -13842438 + RSINE1 SINE B4 18 165 0 6 1397 238 312 101 101 chr13 106441874 106441907 -13842405 + B3A SINE B2 17 194 -4 6 1397 1895 263 15 35 chr13 106441931 106442450 -13841862 - RMER19C LTR ERVK 0 611 103 6 1397 293 400 53 6 chr13 106443656 106443827 -13840485 + MIRb SINE MIR 44 222 -46 6 1397 225 108 0 0 chr13 106444285 106444322 -13839990 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1397 288 0 0 0 chr13 106444592 106444624 -13839688 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1397 325 352 71 41 chr13 106444766 106444935 -13839377 - B4A SINE B4 -117 175 2 6 1397 1423 210 40 24 chr13 106445048 106445345 -13838967 + RLTR25B LTR ERVK 1 302 -726 6 1397 450 254 23 38 chr13 106445352 106445483 -13838829 + RLTR25B LTR ERVK 900 1028 0 6 1397 250 327 64 27 chr13 106446090 106446200 -13838112 + MER95 LTR ERV 1 114 -317 6 1397 3055 218 28 35 chr13 106446214 106446922 -13837390 + Lx7 LINE L1 5880 6582 -1114 6 1397 891 136 0 0 chr13 106446932 106447072 -13837240 - URR1B DNA MER1_type 0 225 86 6 1397 386 229 72 60 chr13 106447072 106447093 -13837219 + CYRA11_Mm Unknown Y-chromosome 197 334 -283 6 1397 233 205 0 0 chr13 106447108 106447147 -13837165 + Lx7 LINE L1 6657 6695 -1001 6 1397 725 76 8 0 chr13 106447398 106447516 -13836796 + (GA)n Simple_repeat Simple_repeat 2 120 0 6 1397 25 65 0 0 chr13 106448185 106448231 -13836081 + AT_rich Low_complexity Low_complexity 1 46 0 6 1397 742 286 18 39 chr13 106451772 106452001 -13832311 - B4A SINE B4 -5 287 64 6 1397 25 0 0 0 chr13 106452006 106452031 -13832281 + AT_rich Low_complexity Low_complexity 1 25 0 6 1397 1010 169 27 7 chr13 106452063 106452252 -13832060 - Lx4A LINE L1 -143 6915 6705 6 1397 1816 240 58 32 chr13 106452328 106452649 -13831663 - Lx7 LINE L1 0 7696 7363 6 1397 294 50 0 0 chr13 106452649 106452689 -13831623 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 6 1397 1816 240 58 32 chr13 106452689 106452905 -13831407 - Lx7 LINE L1 -334 7362 7146 6 1397 245 298 79 64 chr13 106452969 106453105 -13831207 - LTR33C LTR ERVL -324 304 169 6 1397 2618 67 11 11 chr13 106453153 106453513 -13830799 + L1Md_F2 LINE L1 6222 6581 -1 6 1397 1634 80 18 0 chr13 106453519 106453745 -13830567 - Lx LINE L1 -247 6407 6178 6 1397 5445 159 68 21 chr13 106454290 106455259 -13829053 + Lx3C LINE L1 5854 6877 -99 6 1397 369 0 0 0 chr13 106455259 106455300 -13829012 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1397 5445 159 68 21 chr13 106455300 106455399 -13828913 + Lx3C LINE L1 6878 6972 -4 6 1397 180 0 0 0 chr13 106456544 106456564 -13827748 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 6 1397 252 197 45 15 chr13 106456600 106456667 -13827645 - Lx8 LINE L1 -253 7220 7152 6 1397 233 57 0 28 chr13 106456695 106456731 -13827581 + (TAAAAA)n Simple_repeat Simple_repeat 5 39 0 6 1397 21 0 0 0 chr13 106456841 106456862 -13827450 + AT_rich Low_complexity Low_complexity 1 21 0 6 1397 362 375 7 59 chr13 106458397 106458440 -13825872 + RSINE1 SINE B4 15 51 -114 6 1397 2165 114 6 18 chr13 106458440 106458780 -13825532 - L1_Mus2 LINE L1 -2 6564 6229 6 1397 362 375 7 59 chr13 106458780 106458872 -13825440 + RSINE1 SINE B4 52 143 -22 6 1397 306 0 0 0 chr13 106458872 106458906 -13825406 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1397 23 54 0 0 chr13 106458914 106458951 -13825361 + AT_rich Low_complexity Low_complexity 1 37 0 6 1397 186 128 0 0 chr13 106459100 106459139 -13825173 + (TTTTTG)n Simple_repeat Simple_repeat 1 39 0 6 1397 421 286 0 53 chr13 106459139 106459272 -13825040 - MTEa LTR MaLR -12 367 242 6 1397 495 0 0 0 chr13 106460066 106460121 -13824191 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1397 226 253 101 0 chr13 106461807 106461886 -13822426 - L1MEc LINE L1 -4266 2134 2048 6 1397 4301 228 32 10 chr13 106461942 106462821 -13821491 + Lx5 LINE L1 6146 7043 -7 6 1397 15876 51 1 6 chr13 106462824 106464058 -13820254 + L1Md_F2 LINE L1 3887 5121 -762 6 1397 3263 53 0 7 chr13 106464058 106464475 -13819837 + L1Md_F2 LINE L1 6167 6580 -2 6 1397 15876 51 1 6 chr13 106464475 106464657 -13819655 + L1Md_F2 LINE L1 5122 5295 -588 6 1397 5143 53 1 9 chr13 106464657 106465310 -13819002 + L1Md_F2 LINE L1 5935 6582 0 6 1397 15876 55 2 3 chr13 106465310 106466569 -13817743 + L1Md_F2 LINE L1 5296 6555 -27 6 1397 414 0 0 0 chr13 106466575 106466621 -13817691 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 6 1397 526 197 15 0 chr13 106468027 106468159 -13816153 + CT-rich Low_complexity Low_complexity 4 137 0 7 1397 279 203 0 0 chr13 106468147 106468206 -13816106 + T-rich Low_complexity Low_complexity 3 61 0 7 1397 356 212 150 10 chr13 106468227 106468327 -13815985 - ID_B1 SINE B4 -8 216 103 7 1397 225 0 0 0 chr13 106468628 106468653 -13815659 + (TC)n Simple_repeat Simple_repeat 2 26 0 7 1397 220 321 67 30 chr13 106468879 106469014 -13815298 - MIRc SINE MIR -14 254 115 7 1397 243 114 0 0 chr13 106469048 106469092 -13815220 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 7 1397 316 336 85 42 chr13 106469629 106469865 -13814447 + MIR SINE MIR 17 262 0 7 1397 678 183 49 0 chr13 106470193 106470335 -13813977 - Lx9 LINE L1 -155 7489 7341 7 1397 201 328 33 0 chr13 106470800 106470861 -13813451 + MIR SINE MIR 87 149 -59 7 1397 768 335 98 43 chr13 106471004 106471444 -13812868 - MLT2C2 LTR ERVL 0 464 1 7 1397 329 17 33 33 chr13 106472474 106472534 -13811778 + (CAA)n Simple_repeat Simple_repeat 2 61 0 7 1397 249 57 0 0 chr13 106473373 106473408 -13810904 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7 1397 544 284 118 59 chr13 106475402 106475742 -13808570 - MER63D DNA AcHobo 0 1061 702 7 1397 411 338 43 6 chr13 106476056 106476217 -13808095 - MER63D DNA AcHobo -621 440 274 7 1397 282 389 28 80 chr13 106477483 106477659 -13806653 + B4 SINE B4 6 172 -120 7 1397 35133 71 3 3 chr13 106479778 106486034 -13798278 - L1Md_F2 LINE L1 -1 6584 236 7 1397 850 337 79 17 chr13 106486452 106486808 -13797504 - MTD LTR MaLR -14 405 28 7 1397 654 87 0 0 chr13 106486968 106487071 -13797241 + (GA)n Simple_repeat Simple_repeat 1 103 0 7 1397 632 21 21 21 chr13 106487378 106487474 -13796838 + (TTTTA)n Simple_repeat Simple_repeat 2 97 0 7 1397 996 92 14 0 chr13 106487474 106487616 -13796696 - B1_Mus2 SINE Alu -2 145 2 7 1397 249 306 53 21 chr13 106487616 106487663 -13796649 - ORR1B1-int LTR MaLR -859 650 600 7 1397 2428 107 6 3 chr13 106487663 106488010 -13796302 - L1_Mus3 LINE L1 -5 6633 6286 7 1397 249 306 53 21 chr13 106488010 106488048 -13796264 - ORR1B1-int LTR MaLR -910 599 560 7 1397 803 268 63 13 chr13 106488111 106488413 -13795899 - RCHARR1 DNA MER1_type -6 968 652 7 1397 667 105 160 8 chr13 106488895 106489020 -13795292 - B2_Mm1a SINE B2 0 193 50 7 1397 3593 84 74 4 chr13 106489084 106489596 -13794716 + Lx3_Mus LINE L1 6457 7004 -5 7 1397 291 353 104 14 chr13 106490064 106490285 -13794027 + MIRb SINE MIR 1 241 -27 7 1397 420 283 29 65 chr13 106490285 106490376 -13793936 - MER5A1 DNA MER1_type -2 164 78 7 1397 1169 218 136 18 chr13 106490376 106490708 -13793604 - ORR1D1 LTR MaLR -3 371 1 7 1397 420 283 29 65 chr13 106490708 106490786 -13793526 - MER5A1 DNA MER1_type -89 77 1 7 1397 325 310 90 15 chr13 106491267 106491467 -13792845 + L1MC1 LINE L1 4948 5162 -984 7 1397 258 215 152 0 chr13 106491476 106491555 -13792757 + Lx9 LINE L1 7017 7107 -537 7 1397 248 53 0 0 chr13 106491550 106491595 -13792717 + L1_Mus2 LINE L1 6527 6566 0 7 1397 939 43 8 0 chr13 106491607 106491724 -13792588 - L1Md_F2 LINE L1 -648 5934 5817 7 1397 4446 68 48 3 chr13 106491724 106492327 -13791985 + L1Md_F2 LINE L1 5941 6570 -12 7 1397 318 217 50 89 chr13 106492327 106492344 -13791968 - L1MA7 LINE L1 -443 5848 5835 7 1397 1672 219 69 50 chr13 106492373 106492892 -13791420 + Lx9 LINE L1 7116 7644 0 7 1397 260 297 11 11 chr13 106492976 106493068 -13791244 + L1MC1 LINE L1 5246 5337 -809 7 1397 25 51 0 0 chr13 106493106 106493145 -13791167 + AT_rich Low_complexity Low_complexity 1 39 0 7 1397 556 29 0 0 chr13 106493154 106493223 -13791089 + Lx2 LINE L1 6347 6415 -582 7 1397 597 120 0 0 chr13 106493223 106493315 -13790997 + MTB_Mm LTR MaLR 1 92 -315 7 1397 395 236 121 20 chr13 106493423 106493622 -13790690 + L1MC1 LINE L1 5330 5548 -785 7 1397 26 0 0 0 chr13 106493720 106493746 -13790566 + AT_rich Low_complexity Low_complexity 1 26 0 7 1397 229 300 22 11 chr13 106493823 106493914 -13790398 - MER45R DNA Tip100 -316 1265 1174 7 1397 11214 71 25 0 chr13 106494048 106496235 -13788077 + L1_Mus1 LINE L1 4322 6567 0 7 1397 402 341 27 9 chr13 106496358 106496580 -13787732 + L1MC1 LINE L1 6013 6238 -95 7 1397 228 231 187 0 chr13 106497865 106497956 -13786356 + Lx8 LINE L1 6049 6156 -1317 7 1397 1509 58 5 0 chr13 106497954 106498145 -13786167 - L1Md_T LINE L1 -31 6551 6360 7 1397 2524 323 63 11 chr13 106498382 106499388 -13784924 + Lx8 LINE L1 6186 7243 -230 7 1397 4368 12 4 0 chr13 106499392 106499883 -13784429 - MT2_Mm LTR ERVL 0 493 1 7 1397 314 0 0 0 chr13 106499883 106499921 -13784391 - MERVL-int LTR ERVL 0 5485 5448 7 1397 381 137 13 40 chr13 106499921 106499997 -13784315 - ORR1A3-int LTR MaLR -1323 640 567 7 1397 47325 16 6 0 chr13 106500000 106505334 -13778978 - MERVL-int LTR ERVL -117 5368 1 1 1397 4368 12 4 0 chr13 106505334 106505825 -13778487 - MT2_Mm LTR ERVL 0 493 1 1 1397 2081 89 79 6 chr13 106506623 106506938 -13777374 - L1Md_F2 LINE L1 -12 6570 6233 2 1397 8180 64 4 0 chr13 106506939 106508291 -13776021 + L1Md_F2 LINE L1 4827 6185 -397 2 1397 6487 66 12 0 chr13 106508296 106509157 -13775155 - L1_Mm LINE L1 -1076 4807 3937 3 1397 25 75 0 0 chr13 106509700 106509753 -13774559 + AT_rich Low_complexity Low_complexity 1 53 0 4 1397 21 36 0 0 chr13 106509867 106509895 -13774417 + AT_rich Low_complexity Low_complexity 1 28 0 5 1397 32 26 0 0 chr13 106510337 106510376 -13773936 + AT_rich Low_complexity Low_complexity 1 39 0 6 1397 23 78 0 0 chr13 106510513 106510564 -13773748 + AT_rich Low_complexity Low_complexity 1 51 0 7 1397 279 234 16 0 chr13 106510691 106510755 -13773557 + (CA)n Simple_repeat Simple_repeat 2 66 0 8 1397 299 256 0 93 chr13 106510878 106511007 -13773305 - Lx8 LINE L1 -2 7471 7355 9 1397 617 258 0 0 chr13 106511051 106511179 -13773133 - ID_B1 SINE B4 -4 220 93 1 1397 570 190 25 131 chr13 106511259 106511452 -13772860 + ORR1B2 LTR MaLR 1 197 -187 1 1397 318 169 0 0 chr13 106511452 106511541 -13772771 + (TCTG)n Simple_repeat Simple_repeat 2 90 0 1 1397 512 185 149 30 chr13 106511543 106511677 -13772635 + ORR1B2 LTR MaLR 167 316 -68 1 1397 333 0 0 0 chr13 106512060 106512097 -13772215 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1397 348 225 0 0 chr13 106512109 106512180 -13772132 - ORR1B1 LTR MaLR 0 394 324 1 1397 23 0 0 0 chr13 106512298 106512321 -13771991 + AT_rich Low_complexity Low_complexity 1 23 0 1 1397 385 329 95 7 chr13 106513659 106513806 -13770506 + B3A SINE B2 3 162 -36 1 1397 264 77 0 0 chr13 106513812 106513851 -13770461 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1397 234 360 119 47 chr13 106514882 106515159 -13769153 + L3 LINE CR1 4152 4448 -41 1 1397 261 219 68 14 chr13 106515491 106515565 -13768747 - MIR SINE MIR -91 171 94 1 1397 21 36 0 0 chr13 106515827 106515855 -13768457 + AT_rich Low_complexity Low_complexity 1 28 0 2 1397 716 242 67 34 chr13 106515855 106516064 -13768248 - B3 SINE B2 0 216 1 2 1397 496 273 79 74 chr13 106516654 106516856 -13767456 + RMER15 LTR ERVL 22 224 -351 2 1397 1636 170 0 7 chr13 106516874 106517158 -13767154 - Lx2B LINE L1 -256 6744 6463 2 1397 3540 172 83 15 chr13 106517166 106517961 -13766351 + L1_Mus1 LINE L1 5718 6566 -1 2 1397 324 0 0 0 chr13 106518020 106518056 -13766256 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1397 850 220 5 42 chr13 106518066 106518256 -13766056 + Lx4B LINE L1 6176 6358 -700 2 1397 785 142 7 66 chr13 106519237 106519388 -13764924 - URR1B DNA MER1_type 0 225 84 2 1397 326 320 30 82 chr13 106519390 106519617 -13764695 - RLTR11A2 LTR ERVK -33 495 243 2 1397 213 139 0 27 chr13 106519652 106519689 -13764623 + CT-rich Low_complexity Low_complexity 2 37 0 2 1397 636 111 0 0 chr13 106519696 106519786 -13764526 - ORR1A2 LTR MaLR 0 327 238 3 1397 539 134 0 0 chr13 106519779 106519861 -13764451 - ORR1A2 LTR MaLR -245 82 1 3 1397 514 305 80 9 chr13 106519861 106520071 -13764241 - RLTR11A2 LTR ERVK -284 243 19 2 1397 277 238 121 12 chr13 106520094 106520260 -13764052 - L1MA6 LINE L1 -52 6248 6065 3 1397 442 284 33 28 chr13 106520275 106520513 -13763799 - L1MA6 LINE L1 -309 5991 5753 3 1397 492 18 0 0 chr13 106520658 106520715 -13763597 + (CA)n Simple_repeat Simple_repeat 1 57 0 3 1397 306 340 98 34 chr13 106521422 106521626 -13762686 + L1ME3 LINE L1 5946 6162 0 3 1397 1742 10 0 0 chr13 106521790 106521991 -13762321 + L1Md_A LINE L1 6382 6582 0 3 1397 195 42 0 0 chr13 106523512 106523536 -13760776 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1397 805 242 65 0 chr13 106525328 106525514 -13758798 + B3 SINE B2 2 199 -17 3 1397 282 232 113 26 chr13 106525725 106525840 -13758472 - L1M5 LINE L1 -414 5826 5702 3 1397 40 0 0 0 chr13 106526279 106526319 -13757993 + AT_rich Low_complexity Low_complexity 1 40 0 3 1397 369 43 0 0 chr13 106526338 106526385 -13757927 + (CATA)n Simple_repeat Simple_repeat 2 48 0 3 1397 511 211 24 8 chr13 106526395 106526519 -13757793 - Lx8 LINE L1 -1022 6451 6326 4 1397 1070 103 7 0 chr13 106527248 106527394 -13756918 + B1_Mus2 SINE Alu 1 147 0 4 1397 336 94 0 0 chr13 106527495 106527548 -13756764 + (TA)n Simple_repeat Simple_repeat 2 54 0 4 1397 4160 226 112 51 chr13 106527659 106528351 -13755961 + Lx6 LINE L1 5431 6160 -1300 4 1397 411 21 0 0 chr13 106528351 106528399 -13755913 + (CA)n Simple_repeat Simple_repeat 1 48 0 4 1397 4160 255 102 51 chr13 106528399 106528759 -13755553 + Lx6 LINE L1 6161 6551 -909 4 1397 2965 85 5 8 chr13 106528759 106529160 -13755152 - MTB LTR MaLR 0 400 1 4 1397 4160 255 102 51 chr13 106529160 106529650 -13754662 + Lx6 LINE L1 6552 7085 -375 4 1397 2085 100 19 15 chr13 106529751 106530076 -13754236 + IAPEY2_LTR LTR ERVK 32 357 0 4 1397 7604 131 19 9 chr13 106530076 106531275 -13753037 + IAPEY3-int LTR ERVK 1 1211 -6469 4 1397 8981 114 4 17 chr13 106531256 106532616 -13751696 + IAPEy-int LTR ERVK 6171 7513 0 4 1397 2207 88 19 0 chr13 106532626 106532946 -13751366 + IAPEY2_LTR LTR ERVK 32 357 0 4 1397 761 325 88 39 chr13 106532966 106533354 -13750958 + RLTR45 LTR ERVK 76 482 0 4 1397 630 246 102 21 chr13 106533354 106533390 -13750922 + Lx6 LINE L1 7083 7124 -336 4 1397 423 0 0 0 chr13 106533390 106533437 -13750875 + (TA)n Simple_repeat Simple_repeat 1 47 0 4 1397 630 246 102 21 chr13 106533437 106533587 -13750725 + Lx6 LINE L1 7125 7284 -176 4 1397 1103 238 128 28 chr13 106534197 106534587 -13749725 - Lx9 LINE L1 0 7644 7216 5 1397 2292 260 201 30 chr13 106534563 106535551 -13748761 - Lx9 LINE L1 -649 6995 5839 5 1397 401 279 9 20 chr13 106535680 106536036 -13748276 + (CATATA)n Simple_repeat Simple_repeat 1 351 0 5 1397 377 320 11 6 chr13 106536056 106536235 -13748077 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1397 375 311 136 13 chr13 106536323 106536551 -13747761 - Lx8 LINE L1 -6 7467 7212 5 1397 7788 149 62 5 chr13 106536541 106537863 -13746449 + Lx4A LINE L1 5651 7050 -8 5 1397 886 98 0 15 chr13 106537863 106537998 -13746314 + L1_Mus1 LINE L1 6433 6565 -2 5 1397 38 51 0 0 chr13 106538015 106538074 -13746238 + AT_rich Low_complexity Low_complexity 1 59 0 5 1397 488 106 12 0 chr13 106538094 106538179 -13746133 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 1397 279 299 81 32 chr13 106538383 106538604 -13745708 - L1M4 LINE L1 -900 5246 5015 5 1397 24 0 0 0 chr13 106539017 106539041 -13745271 + AT_rich Low_complexity Low_complexity 1 24 0 5 1397 407 291 120 0 chr13 106539075 106539192 -13745120 - RSINE1 SINE B4 -34 131 1 6 1397 868 280 19 14 chr13 106539215 106539425 -13744887 - B3 SINE B2 0 216 6 6 1397 207 0 0 0 chr13 106539533 106539556 -13744756 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1397 458 87 43 0 chr13 106539777 106539846 -13744466 + Lx2B LINE L1 5799 5870 -1130 6 1397 2707 232 51 26 chr13 106539841 106540483 -13743829 + Lx5 LINE L1 6390 7047 -3 6 1397 324 0 0 0 chr13 106540599 106540635 -13743677 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1397 375 60 0 0 chr13 106540635 106540685 -13743627 + (GA)n Simple_repeat Simple_repeat 2 51 0 6 1397 791 266 26 15 chr13 106540719 106540914 -13743398 - B3 SINE B2 -19 197 1 6 1397 453 81 0 0 chr13 106540946 106541008 -13743304 + (CACCAT)n Simple_repeat Simple_repeat 6 67 0 6 1397 1293 83 28 6 chr13 106541141 106541322 -13742990 + B2_Mm2 SINE B2 1 185 -10 6 1397 1017 24 0 0 chr13 106542464 106542588 -13741724 + (CA)n Simple_repeat Simple_repeat 1 124 0 7 1397 406 333 87 0 chr13 106543581 106543731 -13740581 + RSINE1 SINE B4 3 165 0 7 1397 252 305 117 41 chr13 106543852 106544023 -13740289 - MLT1A0 LTR MaLR 0 365 182 7 1397 330 206 0 0 chr13 106544039 106544112 -13740200 + GA-rich Low_complexity Low_complexity 4 76 0 7 1397 239 368 40 57 chr13 106544183 106544307 -13740005 - MLT1A0 LTR MaLR -246 128 7 7 1397 185 0 40 0 chr13 106544749 106544774 -13739538 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1397 440 335 85 63 chr13 106544867 106544926 -13739386 - B4A SINE B4 -7 285 229 7 1397 1132 129 51 0 chr13 106544926 106545104 -13739208 - B2_Mm2 SINE B2 -5 190 4 7 1397 440 335 85 63 chr13 106545104 106545267 -13739045 - B4A SINE B4 -64 228 58 7 1397 288 0 0 0 chr13 106545279 106545311 -13739001 + (TA)n Simple_repeat Simple_repeat 1 32 0 7 1397 600 341 0 88 chr13 106545322 106545560 -13738752 + B4A SINE B4 4 220 -72 7 1397 298 291 215 63 chr13 106545569 106545727 -13738585 + B3 SINE B2 5 186 -30 7 1397 369 102 0 0 chr13 106546561 106546620 -13737692 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1397 547 317 21 14 chr13 106546634 106546775 -13737537 - RSINE1 SINE B4 -22 143 2 8 1397 193 89 0 43 chr13 106546923 106546970 -13737342 + (TTA)n Simple_repeat Simple_repeat 1 45 0 8 1397 466 310 45 0 chr13 106547442 106547597 -13736715 - RSINE1 SINE B4 0 165 4 8 1397 2164 235 48 94 chr13 106548060 106548764 -13735548 - Lx7 LINE L1 0 7696 7025 8 1397 252 327 123 25 chr13 106548764 106548927 -13735385 - B4A SINE B4 -42 250 72 8 1397 349 154 31 0 chr13 106549263 106549328 -13734984 + L1M2 LINE L1 5420 5486 -814 8 1397 395 19 19 0 chr13 106549353 106549405 -13734907 + (TG)n Simple_repeat Simple_repeat 1 53 0 8 1397 5526 110 9 1 chr13 106549425 106550218 -13734094 - L1_Mus4 LINE L1 -6 6630 5832 8 1397 4468 147 3 0 chr13 106550221 106550934 -13733378 + L1_Mus4 LINE L1 5115 5829 -54 8 1397 1022 294 57 20 chr13 106551788 106552142 -13732170 + MTEa LTR MaLR 1 367 -12 8 1397 2686 142 9 7 chr13 106552696 106553021 -13731291 + Lx3C LINE L1 6533 6856 -120 9 1397 459 0 0 0 chr13 106553021 106553072 -13731240 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1397 2686 142 9 7 chr13 106553072 106553187 -13731125 + Lx3C LINE L1 6857 6973 -3 9 1397 218 250 14 14 chr13 106553328 106553397 -13730915 + GA-rich Low_complexity Low_complexity 4 72 0 9 1397 756 195 0 0 chr13 106553598 106553752 -13730560 + GA-rich Low_complexity Low_complexity 4 157 0 9 1397 827 240 171 72 chr13 106553903 106554364 -13729948 - RLTR20C LTR ERVK 0 551 45 9 1397 923 109 7 0 chr13 106554492 106554639 -13729673 + (TTCC)n Simple_repeat Simple_repeat 3 150 0 9 1397 186 133 0 0 chr13 106554657 106554687 -13729625 + (TTCTC)n Simple_repeat Simple_repeat 5 34 0 9 1397 336 365 8 23 chr13 106554791 106554920 -13729392 + L1MC4 LINE L1 6479 6605 -1437 9 1397 34 55 0 0 chr13 106554924 106554979 -13729333 + AT_rich Low_complexity Low_complexity 1 55 0 9 1397 672 48 0 0 chr13 106555004 106555088 -13729224 + (TA)n Simple_repeat Simple_repeat 1 84 0 9 1397 487 349 84 25 chr13 106555870 106556073 -13728239 - B4A SINE B4 -6 286 72 1 1397 180 416 0 0 chr13 106556878 106556967 -13727345 - MIRb SINE MIR -156 112 24 1 1397 5435 191 48 29 chr13 106557327 106559094 -13725218 + Lx3C LINE L1 4836 6636 0 1 1397 2072 172 102 12 chr13 106559097 106559527 -13724785 + Lx3C LINE L1 6373 6841 -135 1 1397 21 0 0 0 chr13 106559882 106559903 -13724409 + AT_rich Low_complexity Low_complexity 1 21 0 1 1397 25 0 0 0 chr13 106559983 106560008 -13724304 + AT_rich Low_complexity Low_complexity 1 25 0 1 1397 288 264 53 83 chr13 106560094 106560226 -13724086 - MLT1A1 LTR MaLR -2 406 279 1 174 803 288 129 105 chr13 106561312 106561654 -13722658 + MTD LTR MaLR 1 350 -69 1 1398 225 171 214 24 chr13 106561866 106561950 -13722362 + L1M4 LINE L1 5010 5109 -1037 1 1398 508 316 58 0 chr13 106562191 106562330 -13721982 + RSINE1 SINE B4 6 152 -13 1 1398 27 0 0 0 chr13 106562338 106562365 -13721947 + AT_rich Low_complexity Low_complexity 1 27 0 1 1398 387 0 0 0 chr13 106562387 106562430 -13721882 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1398 411 309 81 47 chr13 106562747 106563128 -13721184 + L1MB4 LINE L1 5733 6126 -58 1 1398 185 0 40 0 chr13 106563128 106563153 -13721159 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1398 1027 38 45 0 chr13 106563153 106563285 -13721027 - B1_Mus1 SINE Alu -7 141 4 1 1398 303 302 129 6 chr13 106563348 106563511 -13720801 + HAL1 LINE L1 4 186 -2321 1 1398 1156 114 17 0 chr13 106563841 106564016 -13720296 - B2_Mm1t SINE B2 -14 179 2 1 1398 814 55 0 31 chr13 106564534 106564664 -13719648 + L1Md_F2 LINE L1 6449 6574 -8 1 1398 527 233 82 100 chr13 106565751 106566070 -13718242 - Lx7 LINE L1 0 7696 7384 1 1398 3593 126 10 7 chr13 106566067 106566658 -13717654 - L1_Mm LINE L1 -1789 4094 3502 1 1398 3321 165 16 5 chr13 106566658 106567273 -13717039 + L1_Mm LINE L1 4838 5459 -424 1 1398 6169 92 10 1 chr13 106567273 106568142 -13716170 + L1_Mus3 LINE L1 5759 6635 -3 1 1398 4973 26 0 0 chr13 106569667 106570245 -13714067 - L1Md_T LINE L1 -142 6440 5863 1 1398 566 83 0 0 chr13 106570245 106570329 -13713983 + L1Md_A LINE L1 6498 6581 -1 1 1398 5617 6 0 9 chr13 106570412 106571054 -13713258 + L1Md_A LINE L1 5947 6582 0 1 1398 5467 41 0 0 chr13 106571422 106572080 -13712232 + L1Md_T LINE L1 5922 6579 -3 1 1398 225 217 100 0 chr13 106572403 106572463 -13711849 + B1_Mus1 SINE Alu 32 97 -51 1 1398 316 294 22 0 chr13 106572477 106572569 -13711743 + GA-rich Low_complexity Low_complexity 1 94 0 1 1398 438 304 21 62 chr13 106572979 106573123 -13711189 - B1_Mur1 SINE Alu -10 139 2 1 1398 342 115 0 0 chr13 106573206 106573258 -13711054 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1398 31 0 0 24 chr13 106573656 106573668 -13710644 + AT_rich Low_complexity Low_complexity 1 12 0 1 1398 4445 57 2 5 chr13 106573668 106574236 -13710076 + L1Md_F2 LINE L1 6014 6579 -3 1 1398 31 0 0 24 chr13 106574236 106574265 -13710047 + AT_rich Low_complexity Low_complexity 1 29 0 1 1398 22 70 0 0 chr13 106574651 106574694 -13709618 + AT_rich Low_complexity Low_complexity 1 43 0 1 1398 351 0 0 0 chr13 106574779 106574818 -13709494 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 1 1398 715 301 50 103 chr13 106574825 106574853 -13709459 - B4 SINE B4 0 292 268 1 1398 243 0 0 0 chr13 106574853 106574880 -13709432 + (CAGAGA)n Simple_repeat Simple_repeat 2 28 0 1 1398 715 301 50 103 chr13 106574880 106574947 -13709365 - B4 SINE B4 -25 267 224 1 1398 186 43 0 0 chr13 106574947 106574970 -13709342 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1 1398 715 301 50 103 chr13 106574970 106575173 -13709139 - B4 SINE B4 -69 223 9 1 1398 1058 45 0 0 chr13 106575487 106575619 -13708693 - L1Md_F2 LINE L1 -1318 4565 4434 1 1398 7662 69 2 37 chr13 106575617 106576689 -13707623 + L1Md_F2 LINE L1 4551 5584 -299 1 1398 8036 50 1 2 chr13 106576691 106577674 -13706638 + L1Md_F2 LINE L1 5587 6568 -14 1 1398 1070 235 109 39 chr13 106577829 106578188 -13706124 + ORR1C2 LTR MaLR 1 384 0 1 1398 4512 248 41 27 chr13 106578189 106579539 -13704773 + ORR1C2-int LTR MaLR 2 1370 0 1 1398 603 253 117 0 chr13 106579539 106579701 -13704611 + ORR1C2 LTR MaLR 1 181 -193 1 1398 325 247 57 16 chr13 106579667 106579860 -13704452 + RMER17D2 LTR ERVK 347 547 -262 1 1398 637 216 61 61 chr13 106579754 106579966 -13704346 + ORR1C2 LTR MaLR 159 370 -8 1 1398 36 23 0 0 chr13 106580313 106580356 -13703956 + AT_rich Low_complexity Low_complexity 1 43 0 1 1398 8863 98 4 9 chr13 106580385 106582644 -13701668 + L1_Mus1 LINE L1 4413 6567 0 1 1398 549 326 106 51 chr13 106582851 106583049 -13701263 + B4 SINE B4 11 217 -75 1 1398 231 36 0 0 chr13 106583049 106583077 -13701235 + (CAA)n Simple_repeat Simple_repeat 3 30 0 1 1398 549 326 106 51 chr13 106583077 106583133 -13701179 + B4 SINE B4 218 279 -13 1 1398 35179 48 1 5 chr13 106583211 106588668 -13695644 + L1Md_T LINE L1 56 5589 -297 1 1398 8390 35 0 0 chr13 106588668 106589664 -13694648 + L1Md_T LINE L1 5590 6585 0 1 1398 497 177 0 50 chr13 106590405 106590506 -13693806 + L1_Mm LINE L1 4839 4934 -949 1 1398 785 313 125 16 chr13 106591280 106591793 -13692519 + L1MB1 LINE L1 5600 6168 0 1 1398 21 36 0 0 chr13 106592054 106592082 -13692230 + AT_rich Low_complexity Low_complexity 1 28 0 1 1398 189 94 0 0 chr13 106592826 106592858 -13691454 + (TTTTTG)n Simple_repeat Simple_repeat 4 35 0 1 1398 25 0 0 0 chr13 106594621 106594646 -13689666 + AT_rich Low_complexity Low_complexity 1 25 0 1 1398 3753 32 5 0 chr13 106594652 106595086 -13689226 + RLTR10C LTR ERVK 1 436 0 1 1398 2014 221 65 5 chr13 106595928 106596503 -13687809 + Lx9 LINE L1 6965 7622 -22 1 1398 330 304 101 46 chr13 106597716 106597933 -13686379 - MIR SINE MIR -21 241 13 1 1398 385 294 149 50 chr13 106598329 106598630 -13685682 - Kanga1b DNA Tc2 -50 729 399 1 1398 351 0 0 0 chr13 106599283 106599322 -13684990 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1398 339 320 28 17 chr13 106599324 106599508 -13684804 + L1M2 LINE L1 5372 5555 -628 1 1398 257 346 90 8 chr13 106600045 106600179 -13684133 - MIR SINE MIR -10 252 108 1 1398 182 37 0 36 chr13 106600499 106600527 -13683785 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1 1398 6616 170 30 43 chr13 106600823 106600920 -13683392 + Lx5 LINE L1 3357 3464 -2413 1 1398 2969 31 28 0 chr13 106600920 106601279 -13683033 + L1Md_F3 LINE L1 6202 6570 -14 1 1398 6616 170 30 43 chr13 106601279 106602606 -13681706 + Lx5 LINE L1 3465 4763 -1114 1 1398 5735 46 3 0 chr13 106602613 106603427 -13680885 - L1Md_F2 LINE L1 -302 6280 5465 1 1398 1901 55 4 34 chr13 106603428 106603693 -13680619 + L1Md_F2 LINE L1 6325 6581 -1 1 1398 4619 181 72 21 chr13 106603714 106604902 -13679410 + Lx5 LINE L1 4752 6014 -1036 1 1398 878 0 10 0 chr13 106604902 106605004 -13679308 + (TAAAA)n Simple_repeat Simple_repeat 4 106 0 1 1398 2549 154 81 19 chr13 106605004 106605121 -13679191 + Lx5 LINE L1 6015 6134 -916 1 1398 7535 95 9 7 chr13 106605283 106606628 -13677684 - L1_Mus3 LINE L1 0 6638 5289 1 1398 18453 150 5 3 chr13 106606632 106609928 -13674384 - L1_Mus3 LINE L1 -1400 4483 1182 1 1398 2104 264 82 20 chr13 106609969 106610405 -13673907 - Lx6 LINE L1 -242 7218 6756 1 1398 396 0 0 0 chr13 106610405 106610449 -13673863 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 1 1398 2104 264 82 20 chr13 106610449 106610618 -13673694 - Lx6 LINE L1 -705 6755 6575 1 1398 31 0 0 0 chr13 106610651 106610682 -13673630 + AT_rich Low_complexity Low_complexity 1 31 0 1 1398 362 246 11 17 chr13 106611233 106611407 -13672905 + (TATATG)n Simple_repeat Simple_repeat 6 178 0 1 1398 455 269 76 0 chr13 106612589 106612708 -13671604 + B1_Mur2 SINE Alu 14 141 -8 1 1398 21 0 0 0 chr13 106612807 106612828 -13671484 + AT_rich Low_complexity Low_complexity 1 21 0 1 1398 1740 78 116 53 chr13 106613654 106613939 -13670373 - L1_Mus1 LINE L1 -2 6565 6263 1 1398 6677 77 5 15 chr13 106614374 106615278 -13669034 + L1_Mus1 LINE L1 5693 6567 0 1 1398 242 245 0 0 chr13 106615283 106615336 -13668976 + A-rich Low_complexity Low_complexity 1 53 0 1 1398 627 218 0 0 chr13 106616988 106617130 -13667182 + (CATATA)n Simple_repeat Simple_repeat 2 143 0 1 1398 520 346 33 47 chr13 106617294 106617655 -13666657 - Lx9 LINE L1 -204 7440 7085 1 1398 31 58 0 14 chr13 106617807 106617838 -13666474 + AT_rich Low_complexity Low_complexity 1 31 0 1 1398 1854 138 56 3 chr13 106617838 106618158 -13666154 + Lx3B LINE L1 6631 6967 -6 1 1398 31 58 0 14 chr13 106618158 106618196 -13666116 + AT_rich Low_complexity Low_complexity 1 38 0 1 1398 225 355 56 35 chr13 106618346 106618489 -13665823 + L1MDb LINE L1 135 280 -6353 1 1398 337 315 65 0 chr13 106618905 106619089 -13665223 + L1MDb LINE L1 1064 1259 -5281 1 1398 866 117 6 16 chr13 106619304 106619486 -13664826 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1 1398 657 258 33 0 chr13 106619566 106619717 -13664595 - MTD LTR MaLR -96 323 168 1 1398 6866 137 17 4 chr13 106620645 106622495 -13661817 + L1_Mus4 LINE L1 4760 6629 -7 1 1398 1126 63 14 0 chr13 106622505 106622647 -13661665 + B1_Mus2 SINE Alu 1 144 -3 1 1398 185 0 0 39 chr13 106622647 106622673 -13661639 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1 1398 28 0 0 0 chr13 106623188 106623216 -13661096 + AT_rich Low_complexity Low_complexity 1 28 0 1 1398 519 112 0 0 chr13 106623390 106623470 -13660842 + (CA)n Simple_repeat Simple_repeat 1 80 0 1 1398 22 70 0 0 chr13 106624233 106624276 -13660036 + AT_rich Low_complexity Low_complexity 1 43 0 1 1398 633 355 91 14 chr13 106624415 106624912 -13659400 + Lx8 LINE L1 6879 7413 -60 1 1398 379 165 12 12 chr13 106624912 106624998 -13659314 + G-rich Low_complexity Low_complexity 5 90 0 1 1398 806 69 8 22 chr13 106624998 106625132 -13659180 + (GAA)n Simple_repeat Simple_repeat 3 134 0 1 1398 948 304 50 43 chr13 106625256 106625558 -13658754 - MTE2b LTR MaLR -61 318 15 1 1398 663 57 0 0 chr13 106625985 106626073 -13658239 + (CA)n Simple_repeat Simple_repeat 2 89 0 1 1398 1631 95 0 13 chr13 106626253 106626488 -13657824 + L1Md_F2 LINE L1 6339 6570 -12 1 1398 201 154 0 0 chr13 106627873 106627912 -13656400 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 1 1398 455 323 70 37 chr13 106628018 106628291 -13656021 - RMER5 LTR ERV1 -252 282 1 1 1398 678 164 0 0 chr13 106628526 106628648 -13655664 + GA-rich Low_complexity Low_complexity 3 124 0 1 1398 12397 183 67 9 chr13 106629086 106631082 -13653230 - L1_Mur2 LINE L1 -1668 4209 2061 1 1398 216 0 0 0 chr13 106631082 106631106 -13653206 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1398 12397 198 57 10 chr13 106631106 106632189 -13652123 - L1_Mur2 LINE L1 -3817 2060 871 1 1398 192 143 54 0 chr13 106633039 106633095 -13651217 + GA-rich Low_complexity Low_complexity 1 59 0 1 1398 22 0 0 0 chr13 106633985 106634007 -13650305 + AT_rich Low_complexity Low_complexity 1 22 0 1 1398 1049 66 7 0 chr13 106635474 106635610 -13648702 + B1_Mus1 SINE Alu 2 138 -10 1 1398 225 0 0 0 chr13 106635610 106635635 -13648677 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1398 7600 56 8 5 chr13 106636192 106637418 -13646894 - L1Md_F2 LINE L1 0 6582 5350 2 1398 495 184 234 51 chr13 106637433 106637529 -13646783 - Lx9 LINE L1 -2 7642 7531 2 1398 180 77 0 0 chr13 106637529 106637555 -13646757 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1398 495 184 234 51 chr13 106637555 106637693 -13646619 - Lx9 LINE L1 -114 7530 7365 2 1398 2862 207 43 25 chr13 106637953 106638583 -13645729 - RLTR26 LTR ERVK -1 641 1 2 1398 22 35 0 0 chr13 106639048 106639077 -13645235 + AT_rich Low_complexity Low_complexity 1 29 0 2 1398 3062 168 0 20 chr13 106639079 106639615 -13644697 - Lx3B LINE L1 -5 6968 6444 2 1398 1659 95 4 0 chr13 106639627 106639869 -13644443 + L1_Mur1 LINE L1 4395 4637 -1249 2 1398 37 23 0 0 chr13 106639871 106639915 -13644397 + AT_rich Low_complexity Low_complexity 1 44 0 2 1398 4285 86 16 0 chr13 106640099 106640666 -13643646 - L1_Mus2 LINE L1 -1 6565 5990 2 1398 390 309 49 42 chr13 106640809 106640951 -13643361 - B1F2 SINE Alu -6 143 1 2 1398 1483 340 94 45 chr13 106641340 106641891 -13642421 - Lx8 LINE L1 -17 7456 6841 2 1398 270 0 0 0 chr13 106641891 106641921 -13642391 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1398 1483 340 94 45 chr13 106641921 106641932 -13642380 - Lx8 LINE L1 -633 6840 6828 2 1398 654 13 0 0 chr13 106641932 106642007 -13642305 + (TG)n Simple_repeat Simple_repeat 2 76 0 2 1398 1483 340 94 45 chr13 106642007 106642605 -13641707 - Lx8 LINE L1 -646 6827 6239 2 1398 2695 151 21 33 chr13 106642711 106643230 -13641082 - L1_Mur2 LINE L1 -849 5028 4516 2 1398 1017 121 46 0 chr13 106643256 106643430 -13640882 + L1_Mus3 LINE L1 6447 6628 -10 2 1398 1264 272 42 3 chr13 106644989 106645324 -13638988 + Lx5 LINE L1 6703 7050 0 2 1398 324 70 0 0 chr13 106645326 106645369 -13638943 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 2 1398 7444 75 4 4 chr13 106645416 106646499 -13637813 - L1_Mus2 LINE L1 -1 6565 5483 2 1398 3247 195 23 26 chr13 106647185 106647833 -13636479 + Lx5 LINE L1 6402 7047 -3 2 1398 322 340 159 6 chr13 106650200 106650357 -13633955 + MER5A DNA MER1_type 6 186 -3 2 1398 1998 157 10 76 chr13 106650541 106650940 -13633372 - ORR1B1 LTR MaLR 0 394 25 2 1398 312 292 42 49 chr13 106651078 106651222 -13633090 - ORR1D1 LTR MaLR 0 374 232 2 1398 720 199 21 0 chr13 106651797 106651938 -13632374 + B1_Mus1 SINE Alu 3 146 -2 2 1398 479 147 0 0 chr13 106652341 106652416 -13631896 - RMER17B LTR ERVK 0 958 884 2 1398 2380 131 42 27 chr13 106652673 106653299 -13631013 - RMER17B LTR ERVK -75 883 1 2 1398 540 0 0 0 chr13 106654326 106654386 -13629926 + (TC)n Simple_repeat Simple_repeat 1 60 0 2 1398 318 316 28 53 chr13 106654934 106655150 -13629162 + MIR SINE MIR 52 262 -6 2 1398 302 245 105 70 chr13 106656442 106656556 -13627756 - B1F2 SINE Alu 0 149 32 2 1398 1246 184 57 4 chr13 106657166 106657411 -13626901 - RLTR22_Mur LTR ERVK 0 1848 1591 2 1398 3045 175 28 31 chr13 106657631 106658274 -13626038 - RLTR22_Mur LTR ERVK -1044 804 164 2 1398 573 88 0 0 chr13 106658274 106658354 -13625958 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 1398 357 300 0 0 chr13 106658388 106658478 -13625834 + RMER12 LTR ERVK 762 851 -471 2 1398 360 0 0 0 chr13 106658496 106658536 -13625776 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1398 759 185 19 38 chr13 106658536 106658693 -13625619 - RLTR22_Mur LTR ERVK -1694 154 1 2 1398 258 331 16 40 chr13 106658752 106658878 -13625434 + Lx8 LINE L1 6817 6939 -534 2 1398 481 341 18 6 chr13 106658991 106659162 -13625150 + Lx8 LINE L1 7108 7280 -193 2 1398 459 0 0 0 chr13 106659375 106659426 -13624886 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1398 4717 163 17 29 chr13 106659426 106660297 -13624015 - L1_Mur2 LINE L1 -184 5693 4833 2 1398 7012 158 23 14 chr13 106660294 106661623 -13622689 - L1_Mur2 LINE L1 -2236 3641 2300 2 1398 6032 203 68 19 chr13 106661617 106662930 -13621382 + Lx5 LINE L1 5670 7046 -4 2 1398 22 0 0 0 chr13 106663371 106663393 -13620919 + AT_rich Low_complexity Low_complexity 1 22 0 2 1398 301 228 0 140 chr13 106663492 106663599 -13620713 - RLTR11A LTR ERVK -3 524 433 2 1398 1687 123 8 4 chr13 106663600 106663861 -13620451 - L1_Mus3 LINE L1 -3 6635 6374 2 1398 4539 91 5 2 chr13 106663866 106664495 -13619817 - L1_Mus1 LINE L1 0 6567 5937 2 1398 1757 45 16 43 chr13 106664495 106664647 -13619665 + L1_Mm LINE L1 4135 4280 -1603 2 1398 2037 28 4 4 chr13 106664647 106664894 -13619418 + L1Md_F2 LINE L1 6324 6570 -12 2 1398 1757 45 16 43 chr13 106664894 106664997 -13619315 + L1_Mm LINE L1 4281 4383 -1500 2 1398 283 87 0 0 chr13 106664996 106665042 -13619270 - L1_Mus3 LINE L1 -249 6389 6344 2 1398 4855 194 41 50 chr13 106665057 106666265 -13618047 - MYSERV16_I-int LTR ERVK -2 2324 1128 2 1398 1008 122 0 0 chr13 106666274 106666421 -13617891 - B1_Mus1 SINE Alu 0 148 2 2 1398 2994 108 5 5 chr13 106666423 106666858 -13617454 + Lx3_Mus LINE L1 6570 7004 -5 2 1398 6664 88 5 7 chr13 106666981 106667904 -13616408 - L1_Mur1 LINE L1 -48 5838 4917 2 1398 628 168 69 0 chr13 106667900 106668031 -13616281 + Lx3_Mus LINE L1 6851 6990 -19 2 1398 21 0 0 0 chr13 106668031 106668052 -13616260 + AT_rich Low_complexity Low_complexity 1 21 0 2 1398 301 317 41 24 chr13 106668106 106668229 -13616083 - RMER4A LTR ERVK -44 422 298 2 1398 2970 230 48 51 chr13 106668229 106669116 -13615196 - MYSERV16_I-int LTR ERVK -1413 913 29 2 1398 21 57 0 0 chr13 106669296 106669331 -13614981 + AT_rich Low_complexity Low_complexity 1 35 0 2 1398 337 312 69 35 chr13 106669331 106669447 -13614865 - B1_Mus1 SINE Alu -6 142 23 2 1398 940 290 92 55 chr13 106669579 106669926 -13614386 - ORR1D2 LTR MaLR -5 365 6 2 1398 1823 309 70 47 chr13 106670628 106671536 -13612776 + Lx8 LINE L1 6265 7193 -280 2 1398 315 71 0 0 chr13 106671661 106671703 -13612609 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 2 1398 2453 123 37 3 chr13 106671775 106672157 -13612155 + Lx2 LINE L1 6601 6995 -2 2 1398 774 202 88 88 chr13 106672177 106672427 -13611885 - RLTR40 LTR ERVK -64 753 504 2 1398 23 78 0 0 chr13 106672959 106673010 -13611302 + AT_rich Low_complexity Low_complexity 1 51 0 2 1398 1724 115 15 4 chr13 106674051 106674312 -13610000 + L1_Mus3 LINE L1 6345 6608 -30 2 1398 541 94 28 0 chr13 106674331 106674437 -13609875 + (TCTA)n Simple_repeat Simple_repeat 4 112 0 2 1398 267 326 0 11 chr13 106674605 106674695 -13609617 + CT-rich Low_complexity Low_complexity 3 91 0 2 1398 256 307 43 26 chr13 106675418 106675535 -13608777 - PB1D7 SINE Alu -1 119 1 2 1398 317 307 9 0 chr13 106675562 106675676 -13608636 - L1ME2 LINE L1 -21 6143 6029 2 1398 24 0 0 0 chr13 106676085 106676109 -13608203 + AT_rich Low_complexity Low_complexity 1 24 0 2 1398 1850 332 45 41 chr13 106676109 106677052 -13607260 - Lx9 LINE L1 -116 7528 6583 2 1398 259 44 44 0 chr13 106677058 106677103 -13607209 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 2 1398 237 371 27 20 chr13 106678585 106678731 -13605581 + Arthur1 DNA Tip100 268 414 -3533 2 1398 305 223 93 46 chr13 106678734 106678842 -13605470 - RMER13A LTR ERVK -747 113 1 2 1398 663 183 0 101 chr13 106678842 106678953 -13605359 - Lx5 LINE L1 -277 6773 6677 2 1398 2140 87 55 0 chr13 106678953 106679263 -13605049 - IAPLTR2b LTR ERVK 0 327 1 2 1398 663 183 0 101 chr13 106679263 106679309 -13605003 - Lx5 LINE L1 -374 6676 6632 2 1398 247 362 62 37 chr13 106679821 106679948 -13604364 + Arthur1 DNA Tip100 3316 3443 -504 2 1398 423 0 0 0 chr13 106679948 106679995 -13604317 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1398 247 362 62 37 chr13 106679995 106680108 -13604204 + Arthur1 DNA Tip100 3444 3562 -385 2 1398 449 299 21 42 chr13 106680121 106680264 -13604048 + B1F SINE Alu 10 149 0 2 1398 230 56 28 0 chr13 106680677 106680713 -13603599 + (TTTTG)n Simple_repeat Simple_repeat 1 37 0 2 1398 942 295 17 20 chr13 106680734 106681014 -13603298 - MTE2b LTR MaLR 0 370 101 2 1398 399 200 69 28 chr13 106681116 106681260 -13603052 - Lx9 LINE L1 -6 7638 7489 2 1398 417 39 0 0 chr13 106681726 106681777 -13602535 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1398 23 0 0 0 chr13 106682096 106682119 -13602193 + AT_rich Low_complexity Low_complexity 1 23 0 2 1398 1507 209 76 0 chr13 106682259 106682603 -13601709 + ORR1D1 LTR MaLR 5 374 0 2 1398 270 0 0 0 chr13 106683160 106683190 -13601122 + (TC)n Simple_repeat Simple_repeat 1 30 0 2 1398 514 51 26 0 chr13 106683485 106683563 -13600749 + (TA)n Simple_repeat Simple_repeat 2 81 0 2 1398 1104 88 0 26 chr13 106683604 106683756 -13600556 + B1_Mus1 SINE Alu 1 148 0 2 1398 308 252 236 7 chr13 106684065 106684213 -13600099 - L1MB8 LINE L1 -209 5969 5788 2 1398 285 292 43 43 chr13 106684214 106684307 -13600005 + MLT1D LTR MaLR 1 93 -412 2 1398 3804 284 42 15 chr13 106684516 106685014 -13599298 + Lx6 LINE L1 5871 6373 -1087 2 1398 4782 100 16 3 chr13 106685014 106685718 -13598594 + L1_Mus4 LINE L1 5919 6631 -5 2 1398 3804 284 42 15 chr13 106685718 106686368 -13597944 + Lx6 LINE L1 6374 7049 -411 2 1398 242 358 19 9 chr13 106686419 106686526 -13597786 + Lx7 LINE L1 7189 7296 -400 2 1398 8216 53 4 3 chr13 106686553 106687595 -13596717 - L1Md_F3 LINE L1 0 6584 5572 2 1398 243 0 0 0 chr13 106687652 106687679 -13596633 + (TATG)n Simple_repeat Simple_repeat 2 28 0 2 1398 2180 242 25 44 chr13 106687828 106688420 -13595892 - Lx7 LINE L1 -6 7690 7110 2 1398 416 317 60 16 chr13 106688472 106688655 -13595657 + L1M2 LINE L1 3818 4008 -2135 2 1398 402 256 142 34 chr13 106688655 106688918 -13595394 - ORR1E LTR MaLR -4 370 61 2 1398 216 0 0 0 chr13 106689046 106689070 -13595242 + (T)n Simple_repeat Simple_repeat 1 24 0 2 1398 640 54 74 0 chr13 106689378 106689526 -13594786 + (TA)n Simple_repeat Simple_repeat 2 160 0 2 1398 11932 62 10 0 chr13 106689526 106691754 -13592558 - L1Md_F2 LINE L1 -21 6561 4315 2 1398 492 48 0 0 chr13 106692251 106692314 -13591998 + (TAAG)n Simple_repeat Simple_repeat 1 63 0 2 1398 31 0 0 0 chr13 106692528 106692559 -13591753 + AT_rich Low_complexity Low_complexity 1 31 0 2 1399 222 37 0 0 chr13 106693538 106693565 -13590747 + (CATA)n Simple_repeat Simple_repeat 2 28 0 2 1399 468 0 0 0 chr13 106693605 106693657 -13590655 + (TG)n Simple_repeat Simple_repeat 1 52 0 2 1399 200 367 162 31 chr13 106693667 106693861 -13590451 + L2 LINE L2 2822 3045 -374 2 1399 405 0 0 0 chr13 106693861 106693906 -13590406 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 2 1399 200 367 162 31 chr13 106693906 106693939 -13590373 + L2 LINE L2 3046 3078 -341 2 1399 482 321 43 16 chr13 106694656 106694843 -13589469 + RMER30 DNA MER1_type 10 201 -1 2 1399 682 290 0 0 chr13 106694920 106695075 -13589237 + B3A SINE B2 3 157 -41 3 1399 351 78 0 0 chr13 106695086 106695137 -13589175 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1399 755 215 11 50 chr13 106695155 106695336 -13588976 - Lx4A LINE L1 -2 7056 6883 3 1399 5647 218 51 2 chr13 106695339 106697011 -13587301 + Lx2B LINE L1 5220 6981 -19 3 1399 249 33 0 0 chr13 106697011 106697041 -13587271 + (CAT)n Simple_repeat Simple_repeat 2 31 0 3 1399 1312 195 45 173 chr13 106699802 106700048 -13584264 + ORR1C2 LTR MaLR 1 190 -194 3 1399 683 81 10 0 chr13 106700048 106700147 -13584165 + (TC)n Simple_repeat Simple_repeat 1 100 0 3 1399 1312 195 45 173 chr13 106700147 106700340 -13583972 + ORR1C2 LTR MaLR 191 384 0 3 1399 916 226 11 0 chr13 106701216 106701402 -13582910 + MTD LTR MaLR 222 409 -10 3 1399 3441 246 102 24 chr13 106701405 106702474 -13581838 + MTD-int LTR MaLR 2 1153 -105 3 1399 5557 39 0 0 chr13 106702474 106703140 -13581172 - L1Md_F2 LINE L1 -189 5694 5029 3 1399 7029 58 1 1 chr13 106703149 106704041 -13580271 + L1Md_F2 LINE L1 5689 6580 -2 3 1399 524 203 34 0 chr13 106704053 106704171 -13580141 + MTD-int LTR MaLR 1135 1256 -2 3 1399 231 136 0 43 chr13 106704173 106704219 -13580093 + MTD LTR MaLR 1 44 -375 3 1399 182 388 60 0 chr13 106704472 106704539 -13579773 - MIRm SINE MIR -185 91 21 3 1399 239 365 102 75 chr13 106705316 106705609 -13578703 - MLT1H-int LTR MaLR -408 1001 701 3 1399 25 0 0 0 chr13 106705760 106705785 -13578527 + AT_rich Low_complexity Low_complexity 1 25 0 3 1399 21 57 0 0 chr13 106705966 106706001 -13578311 + AT_rich Low_complexity Low_complexity 1 35 0 3 1399 2426 84 39 3 chr13 106706427 106706785 -13577527 + L1Md_F2 LINE L1 6208 6578 -4 3 1399 22 35 0 0 chr13 106707360 106707389 -13576923 + AT_rich Low_complexity Low_complexity 1 29 0 3 1399 393 182 80 0 chr13 106708005 106708093 -13576219 + MTC LTR MaLR 284 378 -43 3 1399 1251 226 18 87 chr13 106708097 106708431 -13575881 + ORR1B1 LTR MaLR 30 340 -54 3 1399 633 309 25 0 chr13 106708512 106708716 -13575596 + B3 SINE B2 2 210 -6 3 1399 641 323 25 0 chr13 106710026 106710184 -13574128 + RSINE1 SINE B4 4 165 0 3 1399 904 301 99 3 chr13 106710347 106710690 -13573622 + MTE2b LTR MaLR 1 376 -3 3 1399 922 313 57 13 chr13 106710715 106711032 -13573280 + MTE-int LTR MaLR 71 401 -1179 3 1399 1218 311 103 40 chr13 106711024 106711567 -13572745 + MTE-int LTR MaLR 261 1129 -451 3 1399 31 58 0 0 chr13 106712456 106712508 -13571804 + AT_rich Low_complexity Low_complexity 1 52 0 3 1399 216 271 0 0 chr13 106712524 106712572 -13571740 + (TG)n Simple_repeat Simple_repeat 1 48 0 3 1399 4865 67 32 51 chr13 106712597 106713324 -13570988 + RLTR13D2 LTR ERVK 1 713 -310 3 1399 717 82 0 0 chr13 106713308 106713405 -13570907 - MTB_Mm LTR MaLR -310 97 1 3 1399 2290 83 0 0 chr13 106713657 106713969 -13570343 + RLTR13D2 LTR ERVK 712 1023 0 3 1399 399 280 10 0 chr13 106713969 106714068 -13570244 - ORR1D1 LTR MaLR -274 100 1 3 1399 944 298 63 3 chr13 106714138 106714441 -13569871 + Lx8 LINE L1 6640 6960 -513 3 1399 437 339 148 30 chr13 106714449 106714713 -13569599 - ORR1D2 LTR MaLR -72 298 4 3 1399 1026 315 21 53 chr13 106714717 106715186 -13569126 + Lx8 LINE L1 7019 7472 -1 3 1399 228 161 0 0 chr13 106716158 106716220 -13568092 + (TATATG)n Simple_repeat Simple_repeat 5 66 0 3 1399 260 200 0 0 chr13 106716221 106716286 -13568026 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 3 1399 562 354 86 45 chr13 106716454 106717212 -13567100 - L1M5 LINE L1 -2214 3932 3144 3 1399 312 331 30 81 chr13 106717215 106717263 -13567049 - MT2A LTR ERVL -346 187 1 3 1399 416 308 20 40 chr13 106717263 106717412 -13566900 - MTEb LTR MaLR -233 146 1 3 1399 1512 27 0 31 chr13 106717584 106717777 -13566535 + B2_Mm1a SINE B2 2 188 -5 3 1399 707 248 0 157 chr13 106719955 106720127 -13564185 - B3 SINE B2 -25 191 42 3 1399 240 275 116 0 chr13 106720156 106720225 -13564087 - tRNA-Ile-ATT tRNA tRNA 0 77 1 3 1399 4515 46 0 0 chr13 106720436 106720984 -13563328 - L1Md_F2 LINE L1 -12 6570 6023 3 1399 1068 292 74 6 chr13 106721230 106721567 -13562745 + RMER12 LTR ERVK 1 360 -962 3 1399 312 219 41 0 chr13 106721577 106721650 -13562662 + RMER12 LTR ERVK 542 617 -787 3 1399 478 226 59 162 chr13 106721647 106721937 -13562375 + RLTR22_Mur LTR ERVK 552 811 -1037 3 1399 359 269 15 30 chr13 106721926 106722060 -13562252 + RMER12 LTR ERVK 1108 1239 -569 3 1399 441 0 0 0 chr13 106722104 106722153 -13562159 + (TA)n Simple_repeat Simple_repeat 1 49 0 3 1399 417 292 89 51 chr13 106722188 106722400 -13561912 + RMER12 LTR ERVK 1002 1191 -131 3 1399 2286 215 89 41 chr13 106722523 106723154 -13561158 + L1_Mur2 LINE L1 684 1344 -5742 3 1399 931 179 6 0 chr13 106723164 106723332 -13560980 + L1_Mur1 LINE L1 4886 5054 -832 3 1399 3282 176 139 94 chr13 106723330 106724257 -13560055 + L1_Mus2 LINE L1 5596 6564 -2 3 1399 1039 123 0 0 chr13 106724266 106724436 -13559876 + L1_Mur2 LINE L1 1336 1505 -4372 3 1399 515 217 21 6 chr13 106724437 106724564 -13559748 - ORR1A2 LTR MaLR -4 366 239 3 1399 4578 211 180 24 chr13 106724565 106727469 -13556843 + Lx5 LINE L1 3286 7050 -8 3 1399 198 0 0 0 chr13 106727470 106727492 -13556820 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 3 1399 24406 161 22 19 chr13 106728489 106732372 -13551940 + L1_Mus4 LINE L1 723 4634 -1249 3 1399 230 0 0 32 chr13 106732372 106732403 -13551909 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 3 1399 24406 161 23 18 chr13 106732403 106732700 -13551612 + L1_Mus4 LINE L1 4635 4915 -968 3 1399 792 92 150 0 chr13 106732700 106732820 -13551492 + B1_Mus2 SINE Alu 1 138 -9 3 1399 209 57 0 28 chr13 106732820 106732856 -13551456 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3 1399 24406 133 15 18 chr13 106732856 106733931 -13550381 + L1_Mus4 LINE L1 4916 5997 -639 3 1399 8725 16 0 0 chr13 106733931 106735127 -13549185 - L1Md_A LINE L1 0 6582 5387 3 1399 4503 90 14 5 chr13 106735127 106735774 -13548538 + L1_Mus4 LINE L1 5982 6634 -2 3 1399 2180 326 57 61 chr13 106738493 106739706 -13544606 + Lx8 LINE L1 6265 7472 -1 3 1399 486 305 78 72 chr13 106740440 106740568 -13543744 + MLT1E3 LTR MaLR 444 565 -59 3 1399 1250 95 73 0 chr13 106740568 106740747 -13543565 - B2_Mm2 SINE B2 -3 192 1 3 1399 486 305 78 72 chr13 106740747 106740798 -13543514 + MLT1E3 LTR MaLR 566 624 0 3 1399 451 300 104 52 chr13 106740975 106741276 -13543036 - MTE2b LTR MaLR -8 371 1 3 1399 365 409 18 23 chr13 106741687 106741905 -13542407 - MLT1D LTR MaLR -284 221 5 3 1399 378 326 54 56 chr13 106741932 106742183 -13542129 - MLT1D-int LTR MaLR -83 1288 1109 3 1399 832 307 108 36 chr13 106742212 106742769 -13541543 + L1MC1 LINE L1 5550 6146 -187 3 1399 391 267 51 8 chr13 106742784 106742901 -13541411 + L1MC1 LINE L1 6211 6332 -1 3 1399 380 350 70 92 chr13 106742906 106743221 -13541091 - MLT1D-int LTR MaLR -337 1152 845 3 1399 2065 280 24 30 chr13 106743222 106744423 -13539889 + Lx5 LINE L1 5934 7033 -17 3 1399 180 0 0 0 chr13 106744425 106744445 -13539867 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 3 1399 3641 116 2 51 chr13 106744532 106745124 -13539188 - L1_Mus1 LINE L1 -822 5061 4499 3 1399 7483 103 1 25 chr13 106745119 106746762 -13537550 + L1_Mus1 LINE L1 5078 6567 0 3 1399 379 292 39 9 chr13 106747039 106747211 -13537101 - MLT1D-int LTR MaLR -1296 193 18 3 1399 561 284 48 57 chr13 106747388 106747597 -13536715 - MLT1D LTR MaLR -284 221 15 3 1399 426 20 0 0 chr13 106749939 106749990 -13534322 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1399 255 31 0 0 chr13 106750076 106750108 -13534204 + (TAA)n Simple_repeat Simple_repeat 2 33 0 3 1399 28 0 0 0 chr13 106750464 106750492 -13533820 + AT_rich Low_complexity Low_complexity 1 28 0 3 1399 381 341 109 43 chr13 106751247 106751523 -13532789 + MLT2E LTR ERVL 109 402 -226 3 1399 2353 182 39 21 chr13 106751979 106752445 -13531867 - Lx2B LINE L1 -5 6995 6522 3 1399 1493 201 87 20 chr13 106752459 106752804 -13531508 + Lx9 LINE L1 7021 7388 -256 3 1399 1862 168 16 0 chr13 106752809 106753130 -13531182 - ORR1A2 LTR MaLR -1 326 1 3 1399 1091 117 28 6 chr13 106753130 106753311 -13531001 - ORR1A2-int LTR MaLR 0 1963 1779 3 1399 7422 117 5 2 chr13 106753704 106755446 -13528866 - L1_Mus1 LINE L1 -1 6566 4817 3 1399 33398 76 3 5 chr13 106755445 106760613 -13523699 + L1Md_F3 LINE L1 441 5585 -298 3 1399 7272 47 27 65 chr13 106760614 106761637 -13522675 + L1Md_F3 LINE L1 5587 6570 -14 3 1399 18619 117 5 2 chr13 106761640 106764497 -13519815 - L1_Mm LINE L1 -1053 4830 1966 3 1399 2419 112 110 25 chr13 106764497 106764935 -13519377 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1399 5980 45 4 19 chr13 106764937 106765692 -13518620 - IAPEz-int LTR ERVK -2 6479 5736 3 1399 2249 58 0 0 chr13 106765691 106765969 -13518343 - IAPEz-int LTR ERVK -4845 1636 1359 3 1399 3519 57 7 16 chr13 106765969 106766544 -13517768 - IAPEz-int LTR ERVK -5819 662 168 3 1399 235 333 0 0 chr13 106766544 106766598 -13517714 - RLTR27 LTR ERVK -34 275 222 3 1399 1206 126 77 17 chr13 106766598 106766853 -13517459 - IAPEz-int LTR ERVK -7330 251 10 3 1399 2419 112 110 25 chr13 106766895 106767333 -13516979 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1399 5476 103 21 25 chr13 106767334 106768962 -13515350 - L1VL1 LINE L1 -3913 1970 361 3 1399 29 0 0 0 chr13 106769838 106769867 -13514445 + AT_rich Low_complexity Low_complexity 1 29 0 3 1399 493 329 61 67 chr13 106770264 106770577 -13513735 + MTD LTR MaLR 1 311 -108 3 1399 7107 48 1 0 chr13 106770606 106771478 -13512834 + L1Md_F2 LINE L1 5708 6580 -2 3 1399 189 0 0 0 chr13 106771766 106771787 -13512525 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 3 1399 277 93 18 18 chr13 106772664 106772719 -13511593 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1399 747 22 0 0 chr13 106772724 106772813 -13511499 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 1399 286 299 35 0 chr13 106773113 106773200 -13511112 - MLT1A1 LTR MaLR -282 126 37 3 1399 4291 128 8 8 chr13 106773204 106773873 -13510439 - L1_Mus3 LINE L1 -176 5707 5039 3 1399 6148 133 71 36 chr13 106773868 106775159 -13509153 + L1_Mus3 LINE L1 5713 6997 0 3 1399 248 246 45 30 chr13 106775190 106775257 -13509055 - MIR SINE MIR -184 78 11 3 1399 560 283 126 53 chr13 106775728 106776086 -13508226 - Charlie1b DNA MER1_type -5 518 135 3 1399 591 305 101 36 chr13 106776299 106776889 -13507423 + L1MB7 LINE L1 5386 6013 -171 3 1399 2389 86 71 3 chr13 106776909 106777260 -13507052 - Lx LINE L1 -3 6651 6277 3 1399 1392 157 42 0 chr13 106777374 106777591 -13506721 - Lx LINE L1 -385 6269 6044 3 1399 300 53 0 0 chr13 106777676 106777714 -13506598 + (TCCC)n Simple_repeat Simple_repeat 4 41 0 3 1399 450 0 0 0 chr13 106777729 106777779 -13506533 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1399 287 275 80 34 chr13 106778053 106778198 -13506114 + Lx9 LINE L1 6882 7163 -481 3 1399 22 56 0 0 chr13 106779171 106779207 -13505105 + AT_rich Low_complexity Low_complexity 1 36 0 3 1399 480 18 0 0 chr13 106779511 106779568 -13504744 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1399 342 115 0 0 chr13 106779971 106780023 -13504289 + (T)n Simple_repeat Simple_repeat 1 52 0 3 1399 470 57 14 0 chr13 106780208 106780278 -13504034 + (TG)n Simple_repeat Simple_repeat 2 72 0 3 1399 189 0 0 0 chr13 106780278 106780299 -13504013 + (TC)n Simple_repeat Simple_repeat 1 21 0 3 1399 270 314 136 29 chr13 106780353 106780773 -13503539 - L1M5 LINE L1 -1286 4860 4396 3 1399 318 340 84 103 chr13 106781045 106781337 -13502975 - L1M5 LINE L1 -2178 3968 3669 3 1399 3360 143 18 5 chr13 106781337 106781893 -13502419 - Lx3B LINE L1 -4 6969 6407 3 1399 318 340 84 103 chr13 106781893 106782065 -13502247 - L1M5 LINE L1 -2478 3668 3513 3 1399 474 322 58 41 chr13 106782112 106782526 -13501786 - L1M5 LINE L1 -2713 3433 3013 3 1399 582 200 174 0 chr13 106782673 106782828 -13501484 - RMER1C Other Other -51 1291 1110 3 1399 234 118 0 0 chr13 106782829 106782863 -13501449 + RMER1C Other Other 733 766 -576 3 1399 422 276 60 28 chr13 106782939 106783164 -13501148 - L1M2 LINE L1 -2078 3802 3572 3 1399 24 0 0 0 chr13 106783456 106783480 -13500832 + AT_rich Low_complexity Low_complexity 1 24 0 4 1399 207 316 155 55 chr13 106783558 106783739 -13500573 - L2a LINE L2 -81 3345 3147 4 1399 31123 66 7 1 chr13 106784517 106788667 -13495645 + L1Md_F3 LINE L1 1411 5586 -297 4 1399 7900 49 8 2 chr13 106788667 106789657 -13494655 + L1Md_F3 LINE L1 5587 6582 -2 4 1399 3374 131 16 25 chr13 106789852 106790414 -13493898 - RLTR31B_Mm LTR ERVK 0 557 1 4 1399 264 59 0 0 chr13 106790832 106790866 -13493446 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 4 1399 21 0 0 0 chr13 106791309 106791330 -13492982 + AT_rich Low_complexity Low_complexity 1 21 0 4 1399 566 189 93 16 chr13 106791852 106791981 -13492331 + RMER5 LTR ERV1 205 343 -191 4 1399 1854 262 85 9 chr13 106792013 106792557 -13491755 - Lx2B LINE L1 -20 6980 6396 4 1399 2904 176 69 8 chr13 106792552 106792700 -13491612 - Lx4B LINE L1 -826 6232 6085 4 1399 2736 58 0 25 chr13 106792700 106793055 -13491257 - ORR1A1 LTR MaLR 0 346 1 4 1399 3129 175 36 2 chr13 106793055 106793820 -13490492 - Lx4B LINE L1 -974 6084 5268 4 1399 921 186 96 0 chr13 106793820 106794008 -13490304 + RMER5 LTR ERV1 329 534 0 4 1399 370 416 104 11 chr13 106794008 106794373 -13489939 - MER54A LTR ERVL -38 863 465 4 1399 268 333 52 9 chr13 106794559 106794674 -13489638 - MER54A LTR ERVL -781 120 1 4 1399 181 305 35 35 chr13 106794969 106795054 -13489258 - L4 LINE RTE -729 1300 1216 4 1399 25 31 0 0 chr13 106797697 106797729 -13486583 + AT_rich Low_complexity Low_complexity 1 32 0 4 1399 1646 264 93 4 chr13 106798296 106798760 -13485552 - Lx9 LINE L1 -870 6774 6270 4 1399 226 278 33 77 chr13 106798765 106798948 -13485364 - Lx9 LINE L1 -1302 6342 6168 4 1399 791 281 126 11 chr13 106799535 106799646 -13484666 + MER2 DNA MER2_type 37 181 -164 4 1399 486 0 0 0 chr13 106799646 106799700 -13484612 + (CA)n Simple_repeat Simple_repeat 1 54 0 4 1399 791 281 126 11 chr13 106799700 106799865 -13484447 + MER2 DNA MER2_type 182 345 0 4 1399 1478 265 33 34 chr13 106800535 106801025 -13483287 + Lx3C LINE L1 6439 7039 -19 4 1399 267 31 0 0 chr13 106801045 106801077 -13483235 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1399 243 0 0 0 chr13 106801258 106801285 -13483027 + (CAT)n Simple_repeat Simple_repeat 2 28 0 4 1399 1380 147 0 94 chr13 106801294 106801571 -13482741 - Lx3C LINE L1 -9 6967 6717 4 1399 48 18 0 0 chr13 106801703 106801758 -13482554 + AT_rich Low_complexity Low_complexity 1 55 0 4 1399 456 67 0 0 chr13 106802054 106802114 -13482198 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1399 2366 236 66 104 chr13 106802191 106802379 -13481933 - Lx6 LINE L1 -8 7452 7258 4 1399 1175 99 5 52 chr13 106802379 106802571 -13481741 + B2_Mm1a SINE B2 2 184 -9 4 1399 2366 236 66 104 chr13 106802571 106803106 -13481206 - Lx6 LINE L1 -203 7257 6756 4 1399 186 43 0 0 chr13 106803109 106803132 -13481180 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4 1399 3005 216 79 105 chr13 106803168 106803609 -13480703 + RMER17B LTR ERVK 1 431 -527 4 1399 711 0 0 0 chr13 106803609 106803688 -13480624 + (TC)n Simple_repeat Simple_repeat 2 80 0 4 1399 3005 216 79 105 chr13 106803688 106803824 -13480488 + RMER17B LTR ERVK 432 567 -391 4 1399 195 42 0 0 chr13 106803824 106803848 -13480464 + (CAGAC)n Simple_repeat Simple_repeat 4 27 0 4 1399 3005 216 79 105 chr13 106803848 106804240 -13480072 + RMER17B LTR ERVK 568 945 -13 4 1399 2144 247 10 55 chr13 106804271 106804784 -13479528 - Lx6 LINE L1 -762 6698 6209 4 1399 1268 91 0 6 chr13 106804783 106804960 -13479352 - L1_Mus3 LINE L1 -185 6453 6278 4 1399 1134 106 11 6 chr13 106804960 106805140 -13479172 + L1_Mus3 LINE L1 6454 6634 -4 4 1399 462 199 70 76 chr13 106805153 106805311 -13479001 - Lx6 LINE L1 -1245 6215 6059 4 1399 2909 61 45 3 chr13 106805315 106805695 -13478617 - MTA_Mm LTR MaLR 0 396 1 4 1399 863 244 87 23 chr13 106805695 106805959 -13478353 + Lx6 LINE L1 5917 6197 -1263 4 1399 443 294 62 77 chr13 106806287 106806560 -13477752 + RMER16-int LTR ERVK 1668 1905 -3501 4 1399 255 270 18 91 chr13 106806754 106806864 -13477448 + IAPLTR3-int LTR ERVK 3807 3908 -2913 4 1399 420 20 0 0 chr13 106806869 106806918 -13477394 + (TCC)n Simple_repeat Simple_repeat 3 51 0 4 1399 21 36 0 0 chr13 106808335 106808363 -13475949 + AT_rich Low_complexity Low_complexity 1 28 0 4 1399 1995 137 12 58 chr13 106808460 106808802 -13475510 + ORR1A3 LTR MaLR 1 326 0 4 1399 334 127 28 0 chr13 106810236 106810307 -13474005 + (TCTA)n Simple_repeat Simple_repeat 3 75 0 4 1399 264 122 0 0 chr13 106810334 106810375 -13473937 + (TA)n Simple_repeat Simple_repeat 1 41 0 4 1399 243 0 0 0 chr13 106810375 106810401 -13473911 + (GA)n Simple_repeat Simple_repeat 2 28 0 4 1399 1224 283 20 29 chr13 106810531 106810877 -13473435 + MTEb LTR MaLR 25 367 -12 4 1399 1191 226 156 62 chr13 106811007 106811455 -13472857 - RMER1C Other Other -8 1334 845 4 1399 2631 82 0 52 chr13 106811832 106812058 -13472254 + MTA_Mm LTR MaLR 18 224 -172 4 1399 287 25 25 0 chr13 106812058 106812098 -13472214 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 1399 2631 82 0 52 chr13 106812098 106812271 -13472041 + MTA_Mm LTR MaLR 225 396 0 4 1399 255 286 36 0 chr13 106812690 106812805 -13471507 + GA-rich Low_complexity Low_complexity 1 119 0 4 1399 324 399 41 52 chr13 106813027 106813297 -13471015 + MLT1G3 LTR MaLR 147 413 -182 4 1399 243 0 0 0 chr13 106813400 106813427 -13470885 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1399 321 173 22 16 chr13 106814273 106814346 -13469966 - L1_Mur2 LINE L1 -1082 4801 4721 4 1399 3625 98 11 17 chr13 106814344 106814873 -13469439 + L1_Mur1 LINE L1 5323 5848 -38 4 1399 632 293 7 7 chr13 106814881 106815051 -13469261 + Lx8 LINE L1 6553 6854 -790 4 1399 1051 318 52 27 chr13 106815092 106815568 -13468744 + Lx8 LINE L1 6842 7329 -144 4 1399 336 24 0 0 chr13 106815570 106815611 -13468701 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 4 1399 7202 128 6 15 chr13 106815745 106815825 -13468487 + Lx3A LINE L1 5827 5906 -1075 4 1399 441 0 0 0 chr13 106815825 106815874 -13468438 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 4 1399 7202 128 6 15 chr13 106815874 106816945 -13467367 + Lx3A LINE L1 5907 6968 -13 4 1399 234 62 0 0 chr13 106816945 106816977 -13467335 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 4 1399 294 194 0 0 chr13 106818564 106818631 -13465681 + (CA)n Simple_repeat Simple_repeat 2 68 0 4 1399 301 333 30 10 chr13 106818665 106818765 -13465547 + B1F1 SINE Alu 10 111 -38 4 1399 218 433 0 29 chr13 106818765 106818803 -13465509 + ID_B1 SINE B4 91 224 0 4 1399 279 0 0 0 chr13 106819093 106819124 -13465188 + (TTA)n Simple_repeat Simple_repeat 2 32 0 4 1399 1473 270 157 50 chr13 106819504 106820217 -13464095 + Lx8 LINE L1 6664 7452 -21 4 1399 2201 266 34 28 chr13 106820263 106820875 -13463437 - Lx6 LINE L1 0 7460 6845 4 1399 450 279 109 68 chr13 106820994 106821249 -13463063 - MLT1C LTR MaLR -4 463 152 4 1399 558 153 0 9 chr13 106821249 106821361 -13462951 + Lx LINE L1 6543 6653 -1 4 1399 394 286 118 67 chr13 106821361 106821489 -13462823 - MLT1C LTR MaLR -309 158 20 4 1399 295 315 80 9 chr13 106821500 106821612 -13462700 + PB1D7 SINE Alu 1 120 0 4 1399 243 385 49 45 chr13 106822216 106822439 -13461873 - MIRc SINE MIR -16 252 29 4 1399 495 0 0 0 chr13 106822507 106822562 -13461750 + (TG)n Simple_repeat Simple_repeat 1 55 0 4 1400 6876 135 35 8 chr13 106824098 106825426 -13458886 - Lx LINE L1 -7 6647 5263 4 1400 1236 176 64 4 chr13 106825424 106825675 -13458637 + L1_Mur2 LINE L1 5024 5289 -588 4 1400 24 0 0 0 chr13 106825768 106825792 -13458520 + AT_rich Low_complexity Low_complexity 1 24 0 4 1400 6765 95 17 11 chr13 106825795 106827420 -13456892 + L1VL4 LINE L1 199 1838 -1721 4 1400 7905 48 8 1 chr13 106827417 106828831 -13455481 - L1Md_F2 LINE L1 -2 6580 5154 4 1400 11056 101 8 43 chr13 106828827 106830622 -13453690 + L1VL4 LINE L1 1822 3554 -5 4 1400 2503 83 8 3 chr13 106830669 106831029 -13453283 + L1_Mus3 LINE L1 6272 6633 -5 4 1400 21 82 0 0 chr13 106831709 106831758 -13452554 + AT_rich Low_complexity Low_complexity 1 49 0 4 1400 251 265 0 25 chr13 106831867 106831987 -13452325 + ORR1B1-int LTR MaLR 638 754 -755 4 1400 1016 76 0 0 chr13 106831885 106832017 -13452295 + B1_Mm SINE Alu 6 137 -10 4 1400 341 281 0 10 chr13 106833065 106833169 -13451143 + GA-rich Low_complexity Low_complexity 4 106 0 4 1400 208 234 68 16 chr13 106833242 106833317 -13450995 - MIRc SINE MIR -88 180 99 4 1400 949 277 158 11 chr13 106833637 106834207 -13450105 + L1MC1 LINE L1 1163 1816 -4692 4 1400 255 252 53 38 chr13 106834251 106834383 -13449929 + L1MC1 LINE L1 5483 5616 -892 4 1400 582 278 94 7 chr13 106834429 106834704 -13449608 - L1MC1 LINE L1 -253 6255 5957 4 1400 374 260 225 7 chr13 106834713 106834864 -13449448 + L1MC1 LINE L1 5668 5851 -2366 4 1400 293 240 19 9 chr13 106834899 106835004 -13449308 + Lx9 LINE L1 7531 7636 -8 4 1400 1123 293 106 13 chr13 106835016 106835546 -13448766 + L1MC1 LINE L1 5911 6489 -19 4 1400 218 313 12 24 chr13 106836979 106837064 -13447248 + (CATA)n Simple_repeat Simple_repeat 1 84 0 4 1400 21 36 0 0 chr13 106837660 106837688 -13446624 + AT_rich Low_complexity Low_complexity 1 28 0 4 1400 386 94 16 0 chr13 106837765 106837829 -13446483 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1400 8553 113 3 1 chr13 106837910 106839228 -13445084 - L1_Mur1 LINE L1 -3373 2513 1184 4 1400 684 0 0 0 chr13 106839228 106839304 -13445008 + (TTC)n Simple_repeat Simple_repeat 3 78 0 4 1400 4482 139 34 3 chr13 106839304 106839929 -13444383 - L1_Mur1 LINE L1 -5801 1183 544 4 1400 20852 119 28 5 chr13 106839924 106844235 -13440077 + Lx3A LINE L1 2525 6928 -53 4 1400 2827 125 67 169 chr13 106844241 106844635 -13439677 - L1_Mus2 LINE L1 -304 6262 5832 4 1400 420 20 0 0 chr13 106844635 106844684 -13439628 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 4 1400 2827 125 67 169 chr13 106844684 106844827 -13439485 - L1_Mus2 LINE L1 -735 5831 5806 4 1400 261 0 0 0 chr13 106844827 106844856 -13439456 + (TG)n Simple_repeat Simple_repeat 2 30 0 4 1400 3016 95 28 15 chr13 106844856 106845298 -13439014 - L1_Mus2 LINE L1 -761 5805 5361 4 1400 867 230 29 5 chr13 106845464 106845669 -13438643 + Lx4A LINE L1 6848 7057 -1 4 1400 33452 72 0 16 chr13 106845791 106850954 -13433358 + L1Md_F2 LINE L1 508 5586 -297 4 1400 7891 55 3 1 chr13 106850954 106851946 -13432366 + L1Md_F2 LINE L1 5587 6580 -2 4 1400 21 71 0 0 chr13 106852894 106852936 -13431376 + AT_rich Low_complexity Low_complexity 1 42 0 4 1400 227 341 75 21 chr13 106853019 106853112 -13431200 + B1F SINE Alu 18 115 -34 4 1400 360 0 0 0 chr13 106853757 106853797 -13430515 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 4 1400 999 213 83 27 chr13 106853807 106854153 -13430159 - Lx4B LINE L1 -25 6951 6592 4 1400 180 342 72 40 chr13 106854442 106854567 -13429745 - MIRb SINE MIR -59 209 81 4 1400 1069 168 17 6 chr13 106854974 106855154 -13429158 - URR1A DNA MER1_type -1 225 44 4 1400 4354 115 27 3 chr13 106856326 106856750 -13427562 + L1_Mus3 LINE L1 5945 6375 -263 4 1400 513 0 0 0 chr13 106856750 106856807 -13427505 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1400 4354 115 27 3 chr13 106856807 106857054 -13427258 + L1_Mus3 LINE L1 6376 6630 -8 4 1400 1367 6 0 6 chr13 106857174 106857335 -13426977 + (TAGA)n Simple_repeat Simple_repeat 3 162 0 4 1400 404 51 0 17 chr13 106857889 106857949 -13426363 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 4 1400 229 405 78 6 chr13 106858459 106858638 -13425674 + LTR16E1 LTR ERVL 138 329 -209 4 1400 359 237 82 0 chr13 106858676 106858773 -13425539 + LTR16E1 LTR ERVL 430 534 -4 4 1400 692 103 9 0 chr13 106858971 106859078 -13425234 + (TC)n Simple_repeat Simple_repeat 2 109 0 4 1400 364 284 99 41 chr13 106859355 106859476 -13424836 + B1F1 SINE Alu 7 134 -15 5 1400 305 261 30 135 chr13 106860003 106860136 -13424176 + L1MD LINE L1 5336 5454 -788 5 1400 444 311 20 49 chr13 106860193 106860396 -13423916 + Lx9 LINE L1 7094 7290 -354 5 1400 209 128 0 25 chr13 106860568 106860608 -13423704 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1400 23 68 0 0 chr13 106861381 106861425 -13422887 + AT_rich Low_complexity Low_complexity 1 44 0 5 1400 21 0 0 0 chr13 106861734 106861755 -13422557 + AT_rich Low_complexity Low_complexity 1 21 0 5 1400 209 210 0 16 chr13 106861877 106861940 -13422372 + (CA)n Simple_repeat Simple_repeat 1 62 0 5 1400 1133 69 7 0 chr13 106861998 106862142 -13422170 + B1_Mus2 SINE Alu 3 147 0 5 1400 314 99 36 24 chr13 106862168 106862251 -13422061 + A-rich Low_complexity Low_complexity 1 84 0 5 1400 1426 269 66 81 chr13 106862521 106863377 -13420935 + RMER12 LTR ERVK 1 802 -1006 5 1400 1011 216 47 45 chr13 106863452 106863778 -13420534 + RMER12 LTR ERVK 995 1266 -56 5 1400 2096 99 13 6 chr13 106863815 106864129 -13420183 + IAPLTR2b LTR ERVK 1 316 -11 5 1400 231 36 0 0 chr13 106864738 106864766 -13419546 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1400 1707 196 21 0 chr13 106864766 106865102 -13419210 - MT2A LTR ERVL -38 495 153 5 1400 645 150 94 0 chr13 106865143 106865303 -13419009 - Lx9 LINE L1 -1 7643 7469 5 1400 810 159 82 7 chr13 106865303 106865449 -13418863 - MT2A LTR ERVL -376 157 1 5 1400 8279 9 0 0 chr13 106866983 106867930 -13416382 + L1Md_T LINE L1 5652 6582 0 5 1400 222 91 0 0 chr13 106867946 106867979 -13416333 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1400 204 271 105 12 chr13 106868028 106868114 -13416198 - MER5A DNA MER1_type -4 185 92 5 1400 261 0 0 0 chr13 106868117 106868146 -13416166 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5 1400 22 35 0 0 chr13 106868232 106868261 -13416051 + AT_rich Low_complexity Low_complexity 1 29 0 5 1400 194 72 33 67 chr13 106869204 106869264 -13415048 + T-rich Low_complexity Low_complexity 2 59 0 5 1400 1000 66 44 0 chr13 106869268 106869404 -13414908 - B1_Mm SINE Alu -4 143 2 5 1400 300 295 0 10 chr13 106869510 106869606 -13414706 - L1M2 LINE L1 -761 5539 5445 5 1400 239 294 27 81 chr13 106870417 106870528 -13413784 + MARNA DNA Mariner 473 577 -9 5 1400 297 338 20 27 chr13 106870875 106871021 -13413291 + MLT2B4 LTR ERVL 1 145 -411 5 1400 1019 128 0 0 chr13 106871173 106871314 -13412998 - B1_Mus1 SINE Alu -6 142 2 5 1400 316 310 0 10 chr13 106871314 106871407 -13412905 - B3 SINE B2 -106 110 18 5 1400 4376 51 18 0 chr13 106871459 106872006 -13412306 - L1_Mm LINE L1 0 5883 5327 5 1400 249 79 0 0 chr13 106871997 106872035 -13412277 - L1_Mur1 LINE L1 -385 5501 5464 5 1400 5095 84 63 1 chr13 106872035 106872753 -13411559 + L1Md_F2 LINE L1 5820 6581 -1 5 1400 23 33 0 0 chr13 106873454 106873484 -13410828 + AT_rich Low_complexity Low_complexity 1 30 0 5 1400 300 295 0 10 chr13 106873892 106873988 -13410324 - L1M2 LINE L1 -761 5539 5445 5 1400 659 12 12 0 chr13 106875483 106875563 -13408749 + (CATA)n Simple_repeat Simple_repeat 1 81 0 5 1400 975 71 7 0 chr13 106877470 106877610 -13406702 + L1Md_F2 LINE L1 6430 6570 -12 5 1400 213 245 0 0 chr13 106877658 106877707 -13406605 + T-rich Low_complexity Low_complexity 1 49 0 5 1400 977 214 104 10 chr13 106877804 106878102 -13406210 + Lx9 LINE L1 7311 7636 -8 5 1400 459 0 0 0 chr13 106878713 106878764 -13405548 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1400 3757 104 40 2 chr13 106878853 106879401 -13404911 + L1_Mus4 LINE L1 6066 6634 -2 5 1400 2165 314 77 29 chr13 106879421 106880633 -13403679 + Lx8 LINE L1 5737 7034 -439 5 1400 210 305 134 0 chr13 106880786 106880868 -13403444 - B1_Mus1 SINE Alu -54 94 2 5 1400 30 45 0 0 chr13 106881436 106881480 -13402832 + AT_rich Low_complexity Low_complexity 1 44 0 5 1400 440 316 50 25 chr13 106881737 106881896 -13402416 - RSINE1 SINE B4 0 165 3 5 1400 22 56 0 0 chr13 106882095 106882131 -13402181 + AT_rich Low_complexity Low_complexity 1 36 0 5 1400 537 320 99 15 chr13 106882230 106882633 -13401679 - L1MC1 LINE L1 0 6333 5897 5 1400 384 125 14 0 chr13 106882966 106883038 -13401274 - Lx2A1 LINE L1 0 7008 6936 5 1400 997 311 28 60 chr13 106883051 106883448 -13400864 - Lx8 LINE L1 -10 7463 7080 5 1400 399 41 0 0 chr13 106883765 106883814 -13400498 + (TA)n Simple_repeat Simple_repeat 2 50 0 5 1400 198 0 0 0 chr13 106885110 106885132 -13399180 + (CAAT)n Simple_repeat Simple_repeat 3 24 0 5 1400 2552 119 17 7 chr13 106886836 106887242 -13397070 - Lx LINE L1 -8 6646 6237 5 1400 2161 271 68 25 chr13 106887451 106888086 -13396226 + Lx7 LINE L1 6689 7350 -346 5 1400 210 37 0 0 chr13 106888902 106888929 -13395383 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1400 232 236 41 29 chr13 106889317 106889487 -13394825 + (TATAA)n Simple_repeat Simple_repeat 3 174 0 5 1400 293 231 26 33 chr13 106889415 106889567 -13394745 + (TTATA)n Simple_repeat Simple_repeat 5 155 0 5 1400 366 202 33 55 chr13 106889547 106889730 -13394582 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 5 1400 23 0 0 0 chr13 106889769 106889792 -13394520 + AT_rich Low_complexity Low_complexity 1 23 0 5 1400 21 36 0 0 chr13 106889938 106889966 -13394346 + AT_rich Low_complexity Low_complexity 1 28 0 5 1400 415 127 59 8 chr13 106889979 106890098 -13394214 + (TA)n Simple_repeat Simple_repeat 1 125 0 5 1400 7569 87 16 2 chr13 106891083 106892173 -13392139 - L1_Mus3 LINE L1 -2 6636 5532 5 1400 210 37 0 0 chr13 106892221 106892248 -13392064 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1400 21 36 0 0 chr13 106892297 106892325 -13391987 + AT_rich Low_complexity Low_complexity 1 28 0 5 1400 183 80 0 0 chr13 106892346 106892371 -13391941 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1400 939 115 29 7 chr13 106892399 106892539 -13391773 + B1_Mus1 SINE Alu 1 143 -5 5 1400 26 30 0 0 chr13 106892781 106892814 -13391498 + AT_rich Low_complexity Low_complexity 1 33 0 5 1400 7315 111 21 58 chr13 106892856 106894124 -13390188 - Lx3_Mus LINE L1 -5 7004 5783 5 1400 7830 111 17 4 chr13 106894133 106896122 -13388190 - Lx LINE L1 -12 6642 4631 5 1400 441 191 26 0 chr13 106896137 106896252 -13388060 - Lx3A LINE L1 -3 6978 6861 5 1400 391 314 121 18 chr13 106896468 106896692 -13387620 - MLT1B LTR MaLR -143 247 1 5 1400 201 303 101 0 chr13 106897166 106897265 -13387047 + L2a LINE L2 3234 3342 -84 5 1400 22 56 0 0 chr13 106897384 106897420 -13386892 + AT_rich Low_complexity Low_complexity 1 36 0 5 1400 252 125 152 30 chr13 106898132 106898198 -13386114 + L1MA6 LINE L1 6221 6294 -6 5 1400 1004 248 5 0 chr13 106898216 106898438 -13385874 + Lx6 LINE L1 6507 6729 -731 5 1400 212 0 36 0 chr13 106898447 106898475 -13385837 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 1400 1120 264 35 3 chr13 106898477 106898792 -13385520 + Lx6 LINE L1 7121 7445 -15 5 1400 337 320 139 65 chr13 106899589 106899913 -13384399 - MLT1E1 LTR MaLR -1 653 306 5 1400 2723 57 0 6 chr13 106901001 106901357 -13382955 + L1_Mus1 LINE L1 6214 6567 0 5 1400 1112 70 7 0 chr13 106901767 106901910 -13382402 + B1_Mus1 SINE Alu 5 148 0 5 1400 250 67 22 22 chr13 106901910 106901956 -13382356 + (CAAA)n Simple_repeat Simple_repeat 3 48 0 5 1400 2055 220 56 2 chr13 106902458 106902959 -13381353 - RLTR11A LTR ERVK 0 528 1 5 1400 1416 239 36 17 chr13 106904056 106904418 -13379894 - ORR1D1 LTR MaLR 0 374 6 5 1400 23 0 0 0 chr13 106904548 106904571 -13379741 + AT_rich Low_complexity Low_complexity 1 23 0 5 1400 4685 100 18 9 chr13 106904635 106905321 -13378991 + L1_Mus3 LINE L1 5947 6638 0 5 1400 1961 216 38 2 chr13 106905499 106905899 -13378413 + MTD LTR MaLR 1 414 -5 5 1400 22 35 0 0 chr13 106906181 106906210 -13378102 + AT_rich Low_complexity Low_complexity 1 29 0 5 1400 361 348 154 25 chr13 106906275 106906555 -13377757 + L1M5 LINE L1 4731 5049 -1097 5 1400 217 0 61 0 chr13 106906656 106906689 -13377623 + (TTG)n Simple_repeat Simple_repeat 2 36 0 5 1400 186 43 0 0 chr13 106906689 106906711 -13377601 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1400 7918 56 2 0 chr13 106906715 106907736 -13376576 - L1_Mus1 LINE L1 0 6567 5545 5 1400 400 344 121 56 chr13 106907867 106908298 -13376014 + L1MC4a LINE L1 5292 5750 -2132 5 1400 289 250 65 32 chr13 106908685 106908809 -13375503 + L1MC4a LINE L1 6207 6334 -1548 5 1400 1234 34 0 0 chr13 106909061 106909208 -13375104 + B1_Mus2 SINE Alu 1 147 0 5 1400 326 293 100 20 chr13 106909292 106909442 -13374870 + L1MC4a LINE L1 6767 6928 -954 5 1400 266 269 38 25 chr13 106909468 106909548 -13374764 + B3 SINE B2 8 88 -128 5 1400 468 0 0 0 chr13 106909561 106909613 -13374699 + (CA)n Simple_repeat Simple_repeat 1 52 0 5 1400 1064 202 102 51 chr13 106909665 106909978 -13374334 - Lx7 LINE L1 0 7696 7368 5 1400 493 193 6 6 chr13 106909984 106910145 -13374167 + GA-rich Low_complexity Low_complexity 1 161 0 5 1400 201 143 0 0 chr13 106910146 106910181 -13374131 + (GGGGA)n Simple_repeat Simple_repeat 3 37 0 5 1400 221 182 18 0 chr13 106910181 106910236 -13374076 + (CGAGG)n Simple_repeat Simple_repeat 4 59 0 5 1400 3759 225 160 11 chr13 106910236 106911257 -13373055 - Lx7 LINE L1 -342 7354 6182 5 1400 2721 176 25 27 chr13 106911253 106911983 -13372329 + Lx7 LINE L1 5475 6208 -1488 5 1400 2873 29 8 8 chr13 106911954 106912305 -13372007 + L1Md_T LINE L1 5236 5586 -297 5 1400 8473 32 0 0 chr13 106912305 106913301 -13371011 + L1Md_T LINE L1 5587 6582 0 5 1400 442 293 123 59 chr13 106913346 106914108 -13370204 + L1MC4a LINE L1 7044 7854 -28 5 1400 21 0 0 0 chr13 106914338 106914359 -13369953 + AT_rich Low_complexity Low_complexity 1 21 0 5 1400 223 284 60 0 chr13 106915723 106915790 -13368522 + PB1D7 SINE Alu 29 99 -21 5 1400 725 196 6 0 chr13 106915797 106915923 -13368389 + polypurine Low_complexity Low_complexity 2 127 0 5 1400 1088 114 0 11 chr13 106915923 106916100 -13368212 + (GAAA)n Simple_repeat Simple_repeat 4 178 0 5 1400 725 196 6 0 chr13 106916100 106916146 -13368166 + polypurine Low_complexity Low_complexity 128 174 0 5 1400 3089 42 5 0 chr13 106916331 106916710 -13367602 + L1Md_F2 LINE L1 6185 6565 -17 5 1400 7082 94 17 40 chr13 106917193 106918271 -13366041 + Lx LINE L1 5596 6648 -6 6 1400 230 377 122 34 chr13 106918287 106918581 -13365731 - LTR33 LTR ERVL -67 448 129 6 1400 426 222 0 0 chr13 106918953 106919043 -13365269 + Lx7 LINE L1 7273 7362 -334 6 1400 312 120 0 0 chr13 106919043 106919093 -13365219 + (TTTA)n Simple_repeat Simple_repeat 4 53 0 6 1400 259 25 50 0 chr13 106919217 106919257 -13365055 + (TTTG)n Simple_repeat Simple_repeat 1 42 0 6 1400 450 0 0 0 chr13 106919625 106919675 -13364637 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1400 317 109 18 0 chr13 106919676 106919731 -13364581 + (GA)n Simple_repeat Simple_repeat 1 56 0 6 1400 7825 78 7 7 chr13 106920396 106921473 -13362839 + L1Md_F2 LINE L1 4510 5586 -297 6 1400 7673 57 13 4 chr13 106921474 106922446 -13361866 + L1Md_F2 LINE L1 5588 6568 -14 6 1400 2796 247 170 7 chr13 106922466 106923277 -13361035 + Lx7 LINE L1 6754 7696 0 6 1400 303 315 88 53 chr13 106924850 106925021 -13359291 - ORR1E LTR MaLR -187 187 11 6 1400 281 348 144 17 chr13 106925045 106925226 -13359086 + MLT1H LTR MaLR 31 234 -315 6 1400 998 93 6 0 chr13 106925226 106925387 -13358925 + (TTCC)n Simple_repeat Simple_repeat 4 165 0 6 1400 730 235 8 0 chr13 106925490 106925622 -13358690 + ETnERV2-int LTR ERVK 7070 7202 -204 6 1400 279 0 0 0 chr13 106926789 106926820 -13357492 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1400 775 287 164 14 chr13 106927655 106927948 -13356364 + MTE2a LTR MaLR 2 338 -41 6 1400 3426 40 50 15 chr13 106928458 106928917 -13355395 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1400 371 91 0 0 chr13 106928919 106928974 -13355338 + IAPEz-int LTR ERVK 3 57 -1930 6 1400 860 136 27 96 chr13 106928989 106929176 -13355136 + IAPEz-int LTR ERVK 20 193 -6288 6 1400 245 309 0 0 chr13 106929176 106929231 -13355081 + RLTR27 LTR ERVK 221 275 -34 6 1400 3807 63 2 18 chr13 106929231 106929734 -13354578 + IAPEz-int LTR ERVK 168 662 -5819 6 1400 2237 61 0 0 chr13 106929734 106930012 -13354300 + IAPEz-int LTR ERVK 1359 1636 -4845 6 1400 6035 43 3 19 chr13 106930011 106930767 -13353545 + IAPEz-int LTR ERVK 5736 6479 -2 6 1400 3345 42 55 15 chr13 106930769 106931226 -13353086 + IAPLTR2_Mm LTR ERVK 1 475 0 6 1400 333 284 134 21 chr13 106932535 106932729 -13351583 + L1MEg LINE L1 387 602 -5482 6 1400 1037 189 28 19 chr13 106932883 106933099 -13351213 + Lx7 LINE L1 6767 6984 -712 6 1400 476 318 42 2 chr13 106933227 106933424 -13350888 - L1MB7 LINE L1 -18 6156 5953 6 1400 304 211 0 11 chr13 106933463 106933531 -13350781 + RMER19B LTR ERVK 844 901 -1 6 1400 396 274 53 21 chr13 106933535 106933725 -13350587 - L1MB7 LINE L1 -229 5955 5760 6 1400 403 386 42 52 chr13 106934539 106934553 -13349759 - B4A SINE B4 -8 284 271 6 1400 396 0 0 0 chr13 106934553 106934597 -13349715 + (TG)n Simple_repeat Simple_repeat 2 45 0 6 1400 403 386 42 52 chr13 106934597 106934869 -13349443 - B4A SINE B4 -22 270 2 6 1400 1855 110 89 19 chr13 106935016 106935331 -13348981 + Lx LINE L1 6311 6647 -7 6 1400 753 228 9 2 chr13 106935365 106935553 -13348759 + B3 SINE B2 7 198 0 6 1400 538 326 89 21 chr13 106935926 106936117 -13348195 + B3 SINE B2 9 212 -4 6 1400 750 289 138 32 chr13 106936129 106936882 -13347430 + L1MA4A LINE L1 5072 5933 -1711 6 1400 23 0 0 0 chr13 106937560 106937583 -13346729 + AT_rich Low_complexity Low_complexity 1 23 0 6 1400 759 22 0 0 chr13 106939606 106939695 -13344617 + (TG)n Simple_repeat Simple_repeat 1 89 0 6 1400 6327 132 27 25 chr13 106939867 106941696 -13342616 + Lx LINE L1 4830 6652 -2 6 1400 480 302 67 51 chr13 106942082 106942260 -13342052 + ORR1D1 LTR MaLR 1 181 -193 6 1400 567 101 0 0 chr13 106942262 106942354 -13341958 + (TC)n Simple_repeat Simple_repeat 1 92 0 6 1400 186 103 0 0 chr13 106942354 106942383 -13341929 + (TG)n Simple_repeat Simple_repeat 2 30 0 6 1400 567 101 0 0 chr13 106942383 106942389 -13341923 + (TC)n Simple_repeat Simple_repeat 1 6 0 6 1400 50 59 0 0 chr13 106942700 106942785 -13341527 + AT_rich Low_complexity Low_complexity 1 85 0 6 1400 648 315 136 23 chr13 106943369 106944025 -13340287 - L1M4 LINE L1 -1038 5108 4379 6 1400 609 290 0 8 chr13 106944071 106944203 -13340109 + B1F SINE Alu 10 140 -9 6 1400 664 260 82 53 chr13 106944240 106944484 -13339828 - L1M4 LINE L1 -1980 4166 3916 6 1400 249 244 157 16 chr13 106944474 106944595 -13339717 + L1M4b LINE L1 3547 3684 -3650 6 1400 1807 195 8 0 chr13 106944984 106945343 -13338969 - L1_Mur1 LINE L1 -5754 1228 867 6 1400 6873 154 9 14 chr13 106945376 106947033 -13337279 + Lx3C LINE L1 4761 6401 -575 6 1400 666 222 128 16 chr13 106947031 106947219 -13337093 + Lx6 LINE L1 2523 2731 -3149 6 1400 9134 177 159 29 chr13 106948219 106949752 -13334560 + Lx6 LINE L1 3124 4855 -1025 6 1400 248 49 49 0 chr13 106949752 106949793 -13334519 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 6 1400 9134 208 129 37 chr13 106949793 106951570 -13332742 + Lx6 LINE L1 4856 6881 -579 6 1400 578 14 14 0 chr13 106951570 106951641 -13332671 + (GA)n Simple_repeat Simple_repeat 1 72 0 6 1400 5725 241 98 44 chr13 106951641 106952219 -13332093 + Lx6 LINE L1 6882 7459 -1 6 1400 463 325 68 19 chr13 106952221 106952428 -13331884 + MLT1F2 LTR MaLR 316 532 -28 6 1400 523 282 99 39 chr13 106952432 106952870 -13331442 + L1MB7 LINE L1 5580 6054 -125 6 1400 1840 207 102 26 chr13 106952891 106953382 -13330930 - RLTR11A LTR ERVK 0 528 1 6 1400 2783 77 9 38 chr13 106953859 106954279 -13330033 - L1Md_F2 LINE L1 0 6582 6175 6 1400 677 240 20 7 chr13 106954298 106954445 -13329867 - B1_Mur1 SINE Alu 0 149 1 6 21 1551 302 68 27 chr13 106954713 106955350 -13328962 - Lx8 LINE L1 -52 7421 6759 6 1401 384 264 45 0 chr13 106955354 106955464 -13328848 - PB1D10 SINE Alu 0 117 3 6 1401 2320 63 119 11 chr13 106956886 106957238 -13327074 - RLTR10 LTR ERVK 0 390 1 6 1401 23 33 0 0 chr13 106957397 106957427 -13326885 + AT_rich Low_complexity Low_complexity 1 30 0 6 1401 797 317 74 68 chr13 106957519 106957959 -13326353 + MER31A LTR ERV1 6 448 -37 6 1401 186 356 0 44 chr13 106958673 106958764 -13325548 - L2c LINE L2 -1 3386 3300 6 1401 181 200 18 91 chr13 106958949 106959004 -13325308 - L3 LINE CR1 -4379 110 60 6 1401 1326 170 179 10 chr13 106959129 106959426 -13324886 - RMER6D LTR ERVK -370 350 4 6 1401 1501 220 61 2 chr13 106959811 106960317 -13323995 - L1_Rod LINE L1 -4351 1496 964 6 1401 1005 177 104 0 chr13 106960320 106960512 -13323800 - ORR1C1 LTR MaLR -166 212 1 6 1401 1181 258 76 13 chr13 106960512 106960905 -13323407 - L1_Rod LINE L1 -6640 968 551 6 1401 7181 136 32 12 chr13 106961102 106962309 -13322003 - Lx3_Mus LINE L1 -8 7001 5770 6 1401 293 216 22 11 chr13 106963517 106963606 -13320706 - Lx6 LINE L1 -4 7456 7367 6 1401 5339 117 109 8 chr13 106964389 106965259 -13319053 - RMER17B LTR ERVK 0 958 1 6 1401 3253 233 84 16 chr13 106968805 106969008 -13315304 - Lx7 LINE L1 0 7696 7458 6 1401 1303 97 5 5 chr13 106969008 106969195 -13315117 + B2_Mm2 SINE B2 2 188 -7 6 1401 3253 233 84 16 chr13 106969195 106969825 -13314487 - Lx7 LINE L1 -239 7457 6806 6 1401 625 364 58 4 chr13 106969875 106970134 -13314178 + LTR33C LTR ERVL 16 288 -341 6 1401 2732 88 13 3 chr13 106970187 106970573 -13313739 + L1_Mus3 LINE L1 6249 6638 0 6 1401 371 331 39 98 chr13 106970576 106970780 -13313532 + MLT2E LTR ERVL 418 609 -19 6 1401 414 0 0 0 chr13 106971388 106971434 -13312878 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1401 219 114 0 0 chr13 106971566 106971601 -13312711 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1401 1830 187 17 3 chr13 106971617 106971965 -13312347 + RLTR15 LTR ERVK 4 356 -3 6 1401 453 19 0 0 chr13 106971965 106972019 -13312293 + (CA)n Simple_repeat Simple_repeat 2 55 0 6 1401 914 229 29 0 chr13 106972475 106972685 -13311627 + B3 SINE B2 1 216 0 6 1401 588 324 80 60 chr13 106972875 106973414 -13310898 + L1MEb LINE L1 1366 1927 -5407 6 1401 2063 116 17 29 chr13 106973414 106973761 -13310551 + Lx3B LINE L1 6628 6970 -3 6 1401 303 309 99 101 chr13 106973761 106973809 -13310503 + L1MEb LINE L1 1928 1972 -5362 6 1401 512 101 141 0 chr13 106973809 106973908 -13310404 - L1Md_F2 LINE L1 -2 6580 6468 6 1401 382 310 97 101 chr13 106973908 106974175 -13310137 + L1MEb LINE L1 1973 2330 -4772 6 1401 4763 92 74 1 chr13 106974175 106974892 -13309420 + L1_Mus4 LINE L1 5865 6633 -3 6 1401 382 199 144 132 chr13 106974892 106975029 -13309283 + L1MEb LINE L1 2331 2469 -4633 6 1401 276 200 40 13 chr13 106975242 106975318 -13308994 - L1_Mur1 LINE L1 -6779 203 126 6 1401 2676 81 30 97 chr13 106975322 106975785 -13308527 + Lx3_Mus LINE L1 6109 6540 -469 6 1401 3637 50 30 26 chr13 106975802 106976296 -13308016 + LTRIS2 LTR ERV1 69 564 0 6 1401 3208 110 11 0 chr13 106976297 106976760 -13307552 + Lx3_Mus LINE L1 6542 7009 0 6 1401 216 352 68 0 chr13 106978056 106978144 -13306168 + MIRb SINE MIR 32 125 -143 6 1401 258 292 88 62 chr13 106978237 106978350 -13305962 + PB1D10 SINE Alu 1 116 -1 6 1401 481 301 80 56 chr13 106978345 106978721 -13305591 - MER67C LTR ERV1 -18 693 309 6 1401 502 264 87 13 chr13 106978842 106978992 -13305320 - MER67C LTR ERV1 -407 304 144 6 1401 429 20 0 0 chr13 106978995 106979045 -13305267 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1401 198 71 0 0 chr13 106979547 106979575 -13304737 + (CA)n Simple_repeat Simple_repeat 1 28 0 6 1401 378 94 0 0 chr13 106979578 106979642 -13304670 + (TC)n Simple_repeat Simple_repeat 1 64 0 6 1401 234 62 0 0 chr13 106979645 106979677 -13304635 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1401 921 166 0 0 chr13 106979682 106979851 -13304461 + (TAGA)n Simple_repeat Simple_repeat 2 170 0 6 1401 380 294 56 0 chr13 106980918 106981044 -13303268 + MER5A DNA MER1_type 1 133 -56 6 1401 557 292 164 0 chr13 106982373 106982647 -13301665 + MLT1B LTR MaLR 16 334 -56 6 1401 872 36 0 9 chr13 106982716 106982829 -13301483 + (TG)n Simple_repeat Simple_repeat 1 112 0 6 1401 375 380 39 35 chr13 106982856 106983140 -13301172 - B4A SINE B4 -7 285 1 6 1401 235 263 53 0 chr13 106983141 106983198 -13301114 + MLT1B LTR MaLR 317 376 -14 6 1401 312 289 93 19 chr13 106984420 106984625 -13299687 - L1M3 LINE L1 -917 5223 5004 6 1401 557 240 41 21 chr13 106984688 106984945 -13299367 - L1MA5 LINE L1 -1 6299 6043 6 1401 710 260 83 4 chr13 106985114 106985380 -13298932 - L1MA6 LINE L1 0 6300 6014 6 1401 227 281 161 35 chr13 106985825 106986223 -13298089 - L1MDa LINE L1 -1202 5335 4888 6 1401 5302 214 40 3 chr13 106986220 106987355 -13296957 - Lx2B LINE L1 -2 6998 5821 6 1401 3873 158 29 13 chr13 106987844 106988541 -13295771 + L1_Mur2 LINE L1 5131 5838 -39 6 1401 677 277 196 19 chr13 106988708 106989238 -13295074 - L1MDa LINE L1 -5038 1595 972 6 1401 703 377 48 59 chr13 106989451 106990099 -13294213 - L1MDa LINE L1 -5975 658 18 6 1401 288 371 102 88 chr13 106990666 106991020 -13293292 + MLT1J-int LTR MaLR 848 1206 -181 6 1401 269 351 8 45 chr13 106991020 106991154 -13293158 + MLT1J-int LTR MaLR 1361 1489 0 6 1401 271 272 75 62 chr13 106992146 106992307 -13292005 + L3 LINE CR1 2 164 -4325 6 1401 513 0 0 0 chr13 106992716 106992773 -13291539 + (TG)n Simple_repeat Simple_repeat 1 57 0 6 1401 213 349 32 0 chr13 106992776 106992839 -13291473 - RSINE1 SINE B4 -23 142 78 6 1401 1173 48 7 7 chr13 106993652 106993799 -13290513 + B1_Mm SINE Alu 1 147 0 7 1401 1085 98 12 0 chr13 106994773 106994937 -13289375 + (GGAGAA)n Simple_repeat Simple_repeat 3 168 0 7 1401 1543 282 98 34 chr13 106994939 106995610 -13288702 - Lx8 LINE L1 -8 7465 6752 7 1401 1187 124 43 5 chr13 106996444 106996630 -13287682 + B2_Mm2 SINE B2 1 193 -2 7 1401 612 346 149 14 chr13 106996641 106997131 -13287181 + Charlie25 DNA MER1_type 613 1168 -1356 7 1401 1251 314 67 16 chr13 106997981 106998486 -13285826 + MTE-int LTR MaLR 1 531 -1049 7 1401 243 0 0 0 chr13 106998916 106998943 -13285369 + (TA)n Simple_repeat Simple_repeat 1 27 0 7 1401 1198 41 0 0 chr13 106999019 106999165 -13285147 + B1_Mm SINE Alu 2 147 0 7 1401 1895 145 30 0 chr13 106999697 107000000 -13284312 + Lx4B LINE L1 6214 6525 -533 7 1401 1951 225 45 7 chr13 107000000 107000443 -13283869 + Lx4B LINE L1 6526 6951 -107 1 1401 441 0 0 0 chr13 107000457 107000506 -13283806 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 2 1401 253 369 14 58 chr13 107000852 107000990 -13283322 + Charlie4z DNA MER1_type 30 161 -6 3 1401 438 313 51 29 chr13 107001000 107001138 -13283174 + ID_B1 SINE B4 82 222 -2 4 1401 619 139 36 7 chr13 107001167 107001305 -13283007 + (TAGA)n Simple_repeat Simple_repeat 1 142 0 5 1401 1700 86 25 0 chr13 107001637 107001882 -13282430 + L1_Mus3 LINE L1 6374 6624 -14 6 1401 1599 254 26 28 chr13 107003299 107003805 -13280507 + RLTR16 LTR ERVK 1 505 0 7 1401 716 220 0 13 chr13 107003954 107004106 -13280206 - B2_Mm2 SINE B2 -18 177 28 8 1401 3073 219 111 33 chr13 107004106 107004929 -13279383 + Lx4B LINE L1 5611 6497 -561 9 1401 2260 240 23 14 chr13 107004930 107005416 -13278896 + Lx5 LINE L1 6558 7047 -3 1 1401 441 0 0 0 chr13 107005521 107005570 -13278742 + (TAA)n Simple_repeat Simple_repeat 3 51 0 1 1401 461 267 58 51 chr13 107005887 107006025 -13278287 + B1F2 SINE Alu 2 140 -9 1 1401 348 138 0 0 chr13 107006218 107006283 -13278029 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 1401 191 283 94 0 chr13 107006389 107006442 -13277870 - L2a LINE L2 -50 3376 3319 1 1401 203 61 30 0 chr13 107007201 107007234 -13277078 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1 1401 25 0 0 0 chr13 107007998 107008023 -13276289 + AT_rich Low_complexity Low_complexity 1 25 0 1 1401 397 301 136 27 chr13 107008023 107008199 -13276113 - MTEa LTR MaLR -49 330 144 1 1401 812 309 79 87 chr13 107008259 107008741 -13275571 - Lx8 LINE L1 -7 7466 6989 1 1401 540 43 0 0 chr13 107008741 107008785 -13275527 + (TTC)n Simple_repeat Simple_repeat 2 45 0 1 1401 1044 136 0 0 chr13 107008785 107008961 -13275351 + (TCC)n Simple_repeat Simple_repeat 3 178 0 2 1401 540 43 0 0 chr13 107008961 107008985 -13275327 + (TTC)n Simple_repeat Simple_repeat 2 25 0 2 1401 1134 53 18 0 chr13 107009446 107009617 -13274695 + (GA)n Simple_repeat Simple_repeat 2 175 0 2 1401 234 0 0 0 chr13 107010372 107010398 -13273914 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1401 1550 134 27 129 chr13 107010686 107011096 -13273216 - RMER6C LTR ERVK 0 690 323 2 1401 4893 123 15 3 chr13 107011125 107011848 -13272464 - Lx2 LINE L1 -68 6929 6198 2 1401 1090 165 21 43 chr13 107011850 107012063 -13272249 - RMER6C LTR ERVK -379 341 133 2 1401 2477 163 56 25 chr13 107012063 107012547 -13271765 - RLTR19 LTR ERVK 0 499 1 2 1401 1090 134 25 7 chr13 107012547 107012594 -13271718 - RMER6C LTR ERVK -588 132 113 2 1401 225 0 0 0 chr13 107012676 107012701 -13271611 + (A)n Simple_repeat Simple_repeat 1 25 0 2 1401 223 336 103 45 chr13 107013272 107013428 -13270884 + MIRc SINE MIR 51 215 -53 2 1401 239 315 340 7 chr13 107013945 107014067 -13270245 + B3A SINE B2 7 176 -22 2 1401 234 0 0 0 chr13 107014067 107014093 -13270219 + (CA)n Simple_repeat Simple_repeat 2 27 0 3 1401 239 315 340 7 chr13 107014093 107014114 -13270198 + B3A SINE B2 177 198 0 2 1401 35087 67 1 3 chr13 107014857 107020898 -13263414 - L1Md_F2 LINE L1 -2 6583 462 3 1401 600 335 60 74 chr13 107021379 107021625 -13262687 + ORR1E LTR MaLR 1 250 -109 3 1401 736 298 35 119 chr13 107021625 107022029 -13262283 + ORR1D2 LTR MaLR 1 370 0 3 1401 600 335 60 74 chr13 107022029 107022146 -13262166 + ORR1E LTR MaLR 251 359 0 3 1401 5417 60 0 10 chr13 107022830 107023522 -13260790 + L1_Mus1 LINE L1 5882 6566 -1 3 1401 270 73 0 0 chr13 107024794 107024835 -13259477 + (TTG)n Simple_repeat Simple_repeat 2 42 0 3 1401 189 0 0 0 chr13 107024835 107024856 -13259456 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 1401 1058 95 257 0 chr13 107025295 107025474 -13258838 - URR1B DNA MER1_type 0 225 1 3 1401 531 291 41 41 chr13 107025675 107025872 -13258440 + RLTR16 LTR ERVK 1 197 -308 3 1401 249 277 222 24 chr13 107028383 107028590 -13255722 + MLT1A1 LTR MaLR 12 259 -106 3 1401 10363 169 42 7 chr13 107028604 107031545 -13252767 - Lx4B LINE L1 -20 6980 3907 4 1401 281 218 110 49 chr13 107031545 107031623 -13252689 + MLT1A1 LTR MaLR 288 370 -38 3 1401 374 302 76 0 chr13 107031623 107031742 -13252570 + RSINE1 SINE B4 1 128 -37 4 1401 21 57 0 0 chr13 107031982 107032017 -13252295 + AT_rich Low_complexity Low_complexity 1 35 0 4 1401 922 276 136 31 chr13 107032312 107032857 -13251455 + L1MC LINE L1 4329 4930 -1216 4 1401 484 297 23 38 chr13 107032902 107033035 -13251277 + B1F SINE Alu 18 148 -1 4 1401 180 0 0 0 chr13 107033036 107033056 -13251256 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 4 1401 684 268 52 30 chr13 107033217 107033607 -13250705 + L1MC LINE L1 4946 5337 -809 4 1401 988 117 0 0 chr13 107033607 107033744 -13250568 + B1_Mus1 SINE Alu 2 138 -10 4 1401 338 0 24 0 chr13 107033744 107033786 -13250526 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 4 1401 353 315 30 39 chr13 107033786 107033856 -13250456 + L1MC LINE L1 5338 5402 -744 4 1401 350 264 191 13 chr13 107034001 107034158 -13250154 + L1MC2 LINE L1 6037 6221 -123 4 1401 21 36 0 0 chr13 107034390 107034418 -13249894 + AT_rich Low_complexity Low_complexity 1 28 0 4 1401 4137 103 196 74 chr13 107034579 107035387 -13248925 + RMER17A2 LTR ERVK 1 906 0 5 1401 339 298 11 0 chr13 107035410 107035504 -13248808 + B3A SINE B2 58 152 -46 5 1401 366 42 0 0 chr13 107035547 107035595 -13248717 + (TC)n Simple_repeat Simple_repeat 1 48 0 5 1401 462 18 0 0 chr13 107035595 107035649 -13248663 + (CA)n Simple_repeat Simple_repeat 1 55 0 5 1401 1408 171 96 7 chr13 107037484 107037755 -13246557 + ORR1B1 LTR MaLR 1 295 -99 5 1401 3745 173 104 71 chr13 107037743 107038606 -13245706 + RMER19B LTR ERVK 5 896 -6 5 1401 385 173 0 26 chr13 107038612 107038689 -13245623 + ORR1B1 LTR MaLR 286 360 -7 5 1401 328 369 59 63 chr13 107039850 107040136 -13244176 + MLT1J1 LTR MaLR 36 320 -124 5 1401 22 0 0 0 chr13 107040167 107040189 -13244123 + AT_rich Low_complexity Low_complexity 1 22 0 5 1401 2562 111 13 0 chr13 107040460 107040840 -13243472 + L1_Mus3 LINE L1 6252 6636 -2 5 1401 275 307 87 105 chr13 107041981 107042247 -13242065 - LTR40a LTR ERVL -244 275 15 5 1401 405 0 0 0 chr13 107042658 107042703 -13241609 + (TG)n Simple_repeat Simple_repeat 2 46 0 6 1401 1350 318 52 32 chr13 107042772 107043237 -13241075 + MER77 LTR ERVL 127 600 -7 6 1401 392 303 20 0 chr13 107043590 107043689 -13240623 - B3 SINE B2 -115 101 1 6 1401 322 354 111 61 chr13 107043864 107044107 -13240205 - Charlie2b DNA MER1_type -1924 858 624 6 1401 2527 182 47 10 chr13 107044107 107044616 -13239696 - RLTR11A LTR ERVK 0 528 1 6 1401 322 354 111 61 chr13 107044616 107044814 -13239498 - Charlie2b DNA MER1_type -2159 623 395 6 1401 441 54 0 0 chr13 107045175 107045231 -13239081 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1401 278 226 0 0 chr13 107045365 107045418 -13238894 - MER5A DNA MER1_type -57 132 80 6 1401 721 292 31 71 chr13 107045427 107045577 -13238735 + RCHARR1 DNA MER1_type 160 311 -663 6 1401 1328 82 14 37 chr13 107045577 107045792 -13238520 + L1_Mus3 LINE L1 6428 6637 -1 6 1401 721 292 31 71 chr13 107045792 107045895 -13238417 + RCHARR1 DNA MER1_type 312 403 -571 6 1401 342 0 0 0 chr13 107046210 107046248 -13238064 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1401 212 86 29 0 chr13 107046250 107046285 -13238027 + (TA)n Simple_repeat Simple_repeat 2 37 0 7 1401 573 72 0 0 chr13 107046300 107046383 -13237929 + (TG)n Simple_repeat Simple_repeat 2 84 0 7 1401 296 245 45 0 chr13 107046387 107046492 -13237820 - Lx2B LINE L1 -1169 5831 5722 7 1401 467 348 12 24 chr13 107046555 107046720 -13237592 - B4A SINE B4 0 292 130 7 1401 441 276 123 31 chr13 107046810 107047065 -13237247 - L1_Mur3 LINE L1 -365 5809 5482 7 1401 1374 193 78 101 chr13 107047066 107047412 -13236900 - ORR1B1 LTR MaLR -16 378 41 7 1401 338 261 18 18 chr13 107047418 107047531 -13236781 - L1M2 LINE L1 -772 5528 5416 7 1401 1116 233 157 37 chr13 107047544 107048076 -13236236 + RCHARR1 DNA MER1_type 379 974 0 6 1401 273 438 13 33 chr13 107048501 107048652 -13235660 + MamGypLTR3 LTR Gypsy 253 400 -439 7 1401 349 333 67 0 chr13 107048711 107048816 -13235496 + B4A SINE B4 1 112 -180 7 1401 1935 228 24 5 chr13 107049076 107049456 -13234856 - MTD LTR MaLR -20 399 13 7 1401 723 313 67 19 chr13 107049470 107049737 -13234575 + MamGypLTR3 LTR Gypsy 559 838 -1 7 1401 247 367 82 60 chr13 107049756 107050037 -13234275 + MamSINE1 SINE tRNA 3 289 -1 8 1401 229 384 35 21 chr13 107050109 107050250 -13234062 - MIRb SINE MIR -13 255 113 8 1401 264 59 0 0 chr13 107050702 107050736 -13233576 + U2 snRNA snRNA 1 34 -154 8 1401 227 290 28 28 chr13 107051011 107051082 -13233230 + ID4 SINE ID 2 72 -11 8 1401 564 286 86 11 chr13 107051117 107051304 -13233008 + B3 SINE B2 1 201 -15 8 1401 486 0 0 0 chr13 107051307 107051361 -13232951 + (TAGA)n Simple_repeat Simple_repeat 1 54 0 8 1401 284 270 134 8 chr13 107051484 107051611 -13232701 - MLT2C1 LTR ERVL -254 143 1 8 1401 564 256 124 15 chr13 107051612 107051886 -13232426 + L1MC3 LINE L1 7475 7778 -7 8 1401 232 282 69 63 chr13 107052312 107052471 -13231841 + L1M7 LINE L1 1285 1444 -4774 8 1401 219 182 39 0 chr13 107052664 107052741 -13231571 + (TA)n Simple_repeat Simple_repeat 2 81 0 8 1401 351 176 31 16 chr13 107052755 107052882 -13231430 + (TA)n Simple_repeat Simple_repeat 2 130 0 8 1401 552 35 23 23 chr13 107053238 107053326 -13230986 + (GTTTG)n Simple_repeat Simple_repeat 2 89 0 9 1401 435 136 0 0 chr13 107053326 107053392 -13230920 - B1_Mur4 SINE Alu -10 140 75 9 1401 7456 113 13 8 chr13 107053541 107055050 -13229262 - L1_Mus4 LINE L1 -7 6629 5119 9 1401 2867 144 39 24 chr13 107055497 107056032 -13228280 + RLTR13D1 LTR ERVK 1 543 -359 9 1401 3779 96 26 12 chr13 107056005 107056576 -13227736 + RLTR13D1 LTR ERVK 227 805 -1 9 1401 303 320 76 68 chr13 107056786 107057168 -13227144 + L1M5 LINE L1 3084 3468 -2678 9 1401 405 0 0 0 chr13 107057871 107057916 -13226396 + (GA)n Simple_repeat Simple_repeat 2 46 0 9 1401 249 257 0 0 chr13 107058102 107058172 -13226140 + A-rich Low_complexity Low_complexity 3 72 0 9 1401 258 216 67 13 chr13 107058893 107058968 -13225344 - RMER15 LTR ERVL 0 575 497 9 1401 1651 198 20 26 chr13 107058968 107059315 -13224997 - RMER15 LTR ERVL -36 539 195 9 1401 3151 238 126 17 chr13 107059315 107060234 -13224078 - Lx7 LINE L1 -514 7182 6164 9 1401 260 323 61 15 chr13 107060315 107060513 -13223799 - L1M5 LINE L1 -645 5534 5328 9 1401 14593 138 35 19 chr13 107060516 107064041 -13220271 + L1Md_F LINE L1 98 3551 -2332 1 1401 2142 89 3 0 chr13 107064041 107064345 -13219967 - L1_Mus3 LINE L1 -387 6251 5947 1 1401 414 328 124 41 chr13 107064385 107064700 -13219612 + L2a LINE L2 3004 3344 -82 1 1401 336 274 72 46 chr13 107064887 107065040 -13219272 - L1MD3 LINE L1 -21 7974 7818 1 1401 724 244 18 101 chr13 107065632 107065910 -13218402 - L1Md_F LINE L1 -5982 537 283 1 1401 193 310 0 0 chr13 107066015 107066073 -13218239 - L2 LINE L2 -1428 1991 1934 1 1401 2061 201 83 38 chr13 107067154 107067660 -13216652 - RLTR24 LTR ERV1 0 529 1 1 1401 342 0 0 0 chr13 107069666 107069704 -13214608 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1 1401 1020 146 60 0 chr13 107070006 107070191 -13214121 - Lx3C LINE L1 -2 6974 6779 1 1401 4413 103 38 7 chr13 107070191 107070902 -13213410 - Lx3C LINE L1 -333 6643 5911 1 1401 602 316 69 36 chr13 107070902 107071207 -13213105 + MLT1B LTR MaLR 74 388 -2 1 1401 493 236 167 29 chr13 107072714 107072954 -13211358 + Lx9 LINE L1 7357 7629 -15 1 1401 604 319 67 89 chr13 107073386 107073757 -13210555 + MLT1B LTR MaLR 5 367 -23 1 1401 375 23 0 0 chr13 107075710 107075754 -13208558 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 1 1401 512 33 0 0 chr13 107075754 107075814 -13208498 + (GA)n Simple_repeat Simple_repeat 1 60 0 1 1401 811 141 5 38 chr13 107075814 107075998 -13208314 + GA-rich Low_complexity Low_complexity 2 179 0 1 1401 222 91 0 0 chr13 107079934 107079967 -13204345 + (CATATA)n Simple_repeat Simple_repeat 1 33 0 1 1401 222 37 0 0 chr13 107081055 107081082 -13203230 + (TTGG)n Simple_repeat Simple_repeat 1 27 0 1 1401 13835 69 0 7 chr13 107081137 107084153 -13200159 + L1Md_T LINE L1 77 3169 -2717 1 1401 2931 26 2 172 chr13 107084153 107084623 -13199689 - RLTR10 LTR ERVK 0 390 1 1 1401 8292 18 5 0 chr13 107084625 107085615 -13198697 - RLTR10-int LTR ERVK -3 1984 990 1 175 7662 37 1 0 chr13 107085694 107086641 -13197671 - RLTR10-int LTR ERVK -999 988 41 1 1402 2931 26 2 172 chr13 107086651 107087121 -13197191 - RLTR10 LTR ERVK 0 390 1 1 1402 18779 23 29 0 chr13 107087121 107089478 -13194834 + L1Md_T LINE L1 3164 5589 -297 1 1402 8390 39 0 0 chr13 107089478 107090474 -13193838 + L1Md_T LINE L1 5590 6585 0 1 1402 1773 216 33 16 chr13 107093402 107093770 -13190542 - MTD LTR MaLR -41 378 5 1 1402 600 328 33 5 chr13 107094486 107094670 -13189642 + B4A SINE B4 76 264 -28 1 1402 378 0 0 0 chr13 107094683 107094725 -13189587 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1402 477 0 0 0 chr13 107094725 107094777 -13189535 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1402 264 59 0 0 chr13 107094848 107094882 -13189430 + (ATG)n Simple_repeat Simple_repeat 1 34 0 1 1402 29783 24 5 0 chr13 107095318 107099027 -13185285 + L1Md_T LINE L1 1859 5586 -297 1 1402 8465 35 0 0 chr13 107099028 107100023 -13184289 + L1Md_T LINE L1 5588 6582 0 1 1402 1038 304 91 37 chr13 107100371 107100853 -13183459 - MLT2B2 LTR ERVL -7 508 1 1 1402 234 200 67 0 chr13 107100990 107101035 -13183277 - MIRb SINE MIR -192 76 29 1 1402 277 246 35 0 chr13 107102408 107102465 -13181847 - Tigger7 DNA MER2_type -5 2486 2428 1 1402 654 345 38 21 chr13 107102505 107102742 -13181570 - Tigger7 DNA MER2_type -2150 341 101 1 1402 1072 67 7 0 chr13 107103033 107103168 -13181144 - B1_Mus1 SINE Alu -12 136 1 1 1402 24 53 0 0 chr13 107103316 107103354 -13180958 + AT_rich Low_complexity Low_complexity 1 38 0 1 1402 216 296 95 0 chr13 107103385 107103479 -13180833 - MIR3 SINE MIR -52 156 52 1 1402 207 0 0 0 chr13 107103985 107104008 -13180304 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1402 1773 75 0 0 chr13 107104026 107104254 -13180058 - L1_Mus1 LINE L1 0 6567 6340 1 1402 442 271 131 96 chr13 107105449 107105706 -13178606 + B4 SINE B4 1 270 -22 1 1402 333 0 0 0 chr13 107105706 107105743 -13178569 + (TC)n Simple_repeat Simple_repeat 1 37 0 1 1402 423 0 0 0 chr13 107105743 107105789 -13178523 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1402 442 271 131 96 chr13 107105789 107105812 -13178500 + B4 SINE B4 271 291 -1 1 1402 297 0 0 0 chr13 107106272 107106305 -13178007 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1402 656 303 78 22 chr13 107106348 107106618 -13177694 - B4A SINE B4 -7 285 1 1 1402 2180 159 45 3 chr13 107106664 107107042 -13177270 - Lx3A LINE L1 0 6981 6588 1 1402 441 90 45 0 chr13 107107042 107107109 -13177203 + B2_Mm2 SINE B2 118 187 -8 1 1402 450 0 0 0 chr13 107107786 107107836 -13176476 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1402 247 325 99 33 chr13 107107884 107108005 -13176307 - MER5A DNA MER1_type -48 141 13 1 1402 207 0 0 0 chr13 107108444 107108467 -13175845 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1 1402 245 374 40 67 chr13 107109710 107109859 -13174453 - LTR16E2 LTR ERVL -62 506 362 1 1402 579 323 141 6 chr13 107110169 107110496 -13173816 + MLT2B4 LTR ERVL 112 482 -74 1 1402 396 0 0 0 chr13 107110498 107110542 -13173770 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1402 23 97 0 0 chr13 107110774 107110846 -13173466 + AT_rich Low_complexity Low_complexity 1 72 0 1 1402 2513 253 70 48 chr13 107111069 107111965 -13172347 + Lx7 LINE L1 6781 7696 0 1 1402 671 257 15 0 chr13 107112179 107112315 -13171997 - B1_Mur2 SINE Alu -1 148 11 1 1402 287 313 35 63 chr13 107112222 107112365 -13171947 - MT2B LTR ERVL -343 258 120 1 1402 467 169 0 10 chr13 107112593 107112689 -13171623 + GA-rich Low_complexity Low_complexity 2 96 0 1 1402 24314 137 23 3 chr13 107112883 107116117 -13168195 - L1_Mus4 LINE L1 -2 6634 3273 1 1402 4094 39 0 12 chr13 107116117 107116640 -13167672 - L1Md_A LINE L1 0 6582 6081 1 1402 24314 159 24 21 chr13 107116640 107119403 -13164909 - L1_Mus4 LINE L1 -2611 3272 569 1 1402 183 80 0 0 chr13 107120588 107120613 -13163699 + (CCTTG)n Simple_repeat Simple_repeat 1 25 0 1 1402 253 328 32 27 chr13 107120667 107120855 -13163457 + L1_Rod LINE L1 491 679 -6493 1 1402 413 216 0 0 chr13 107120912 107121014 -13163298 - Lx9 LINE L1 -18 7626 7525 1 1402 1050 164 73 0 chr13 107121021 107121241 -13163071 + Lx9 LINE L1 7212 7447 -197 1 1402 495 33 0 0 chr13 107121247 107121308 -13163004 + (CA)n Simple_repeat Simple_repeat 2 62 0 1 1402 275 286 13 0 chr13 107121440 107121517 -13162795 - RMER1B Other Other -863 203 126 1 1402 502 215 51 4 chr13 107122170 107122312 -13162000 + L1MA5 LINE L1 6149 6296 -1 1 1402 1245 77 0 0 chr13 107122391 107122561 -13161751 + (GA)n Simple_repeat Simple_repeat 1 170 0 1 1402 453 81 0 0 chr13 107124861 107124923 -13159389 + (CA)n Simple_repeat Simple_repeat 1 62 0 1 1402 331 254 88 0 chr13 107125113 107125227 -13159085 + Lx7 LINE L1 6886 7009 -687 1 1402 387 0 0 0 chr13 107125257 107125300 -13159012 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1402 380 246 14 141 chr13 107125346 107125488 -13158824 - B2_Mm2 SINE B2 -71 124 1 1 1402 547 259 93 25 chr13 107125548 107125707 -13158605 - B4A SINE B4 -86 206 40 1 1402 601 233 111 67 chr13 107125772 107125997 -13158315 - Lx5 LINE L1 -2 7048 6814 1 1402 1395 168 4 4 chr13 107125997 107126242 -13158070 + Lx4B LINE L1 6426 6670 -388 1 1402 275 340 10 31 chr13 107128250 107128347 -13155965 - MER5A1 DNA MER1_type -26 140 46 1 1402 2212 97 22 12 chr13 107128714 107129038 -13155274 + ORR1A2 LTR MaLR 1 327 0 1 1402 194 388 60 0 chr13 107129099 107129166 -13155146 + MER5A DNA MER1_type 117 187 -2 1 1402 4173 77 5 9 chr13 107129627 107130193 -13154119 + L1_Mus1 LINE L1 6002 6565 -2 1 1402 240 59 0 0 chr13 107130650 107130684 -13153628 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1402 2123 125 0 52 chr13 107131742 107132104 -13152208 - L1Md_F2 LINE L1 -12 6570 6228 1 1402 3559 61 2 0 chr13 107132106 107132582 -13151730 + L1_Mm LINE L1 4712 5188 -695 1 1402 791 44 26 0 chr13 107132692 107132806 -13151506 + (CAAAA)n Simple_repeat Simple_repeat 2 118 0 1 1402 3436 61 0 41 chr13 107133424 107133889 -13150423 - L1_Mus1 LINE L1 -3 6564 6119 1 1402 251 316 60 0 chr13 107134055 107134172 -13150140 - LTR33 LTR ERVL -385 130 7 1 1402 234 337 45 0 chr13 107134178 107134267 -13150045 - MIRc SINE MIR -157 111 19 1 1402 212 163 47 0 chr13 107134267 107134310 -13150002 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1 1402 526 305 78 25 chr13 107135484 107135726 -13148586 + MER34 LTR ERV1 1 255 -287 1 1402 7215 84 2 3 chr13 107135845 107137331 -13146981 - L1_Mus1 LINE L1 -2 6565 5082 1 1402 974 80 13 7 chr13 107137333 107137484 -13146828 - L1_Mus3 LINE L1 -3 6635 6484 1 1402 393 338 27 7 chr13 107137508 107137657 -13146655 + MER34 LTR ERV1 368 519 -23 1 1402 1518 185 77 33 chr13 107138435 107138798 -13145514 - Lx9 LINE L1 -1 7643 7265 1 1402 342 195 24 12 chr13 107138822 107138905 -13145407 + Lx9 LINE L1 6911 6994 -650 1 1402 253 315 44 44 chr13 107138921 107139034 -13145278 - MIRc SINE MIR -125 143 31 1 1402 304 318 19 57 chr13 107140381 107140538 -13143774 - MIR SINE MIR -56 206 56 1 1402 1161 247 38 3 chr13 107140626 107140939 -13143373 + Lx8 LINE L1 6929 7252 -221 1 1402 438 288 66 54 chr13 107140939 107141181 -13143131 + Lx8 LINE L1 7174 7418 -55 1 1402 231 258 15 0 chr13 107141487 107141553 -13142759 + Lx8 LINE L1 7382 7448 -25 1 1402 312 297 0 4 chr13 107142419 107142655 -13141657 + (CA)n Simple_repeat Simple_repeat 1 234 0 1 1402 817 261 137 13 chr13 107143289 107143588 -13140724 + RMER15 LTR ERVL 238 573 -2 1 1402 495 0 0 0 chr13 107143650 107143705 -13140607 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 1 1402 36 23 0 0 chr13 107144018 107144061 -13140251 + AT_rich Low_complexity Low_complexity 1 43 0 1 1402 252 184 0 0 chr13 107144061 107144110 -13140202 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1402 963 222 128 73 chr13 107145806 107146282 -13138030 - RMER4B LTR ERVK 0 585 47 1 1402 14735 23 0 0 chr13 107146293 107148776 -13135536 - L1Md_T LINE L1 0 6582 4100 1 1402 260 377 28 9 chr13 107149087 107149194 -13135118 + MLT1H LTR MaLR 122 230 -319 1 1402 945 286 69 58 chr13 107149201 107149561 -13134751 - MLT1B LTR MaLR -24 366 3 1 1402 422 320 128 9 chr13 107149608 107149819 -13134493 + MLT1H LTR MaLR 314 549 0 1 1402 339 299 50 17 chr13 107149858 107149977 -13134335 - MLT1N2 LTR MaLR 0 562 440 1 1402 902 252 48 24 chr13 107150277 107150484 -13133828 + ID_B1 SINE B4 9 220 -4 1 1402 804 149 45 48 chr13 107150494 107150659 -13133653 + B2_Mm2 SINE B2 2 191 -7 1 1402 270 0 0 0 chr13 107151101 107151131 -13133181 + (TG)n Simple_repeat Simple_repeat 2 31 0 2 1402 230 240 20 0 chr13 107151284 107151334 -13132978 + CT-rich Low_complexity Low_complexity 5 55 0 2 1402 320 290 94 45 chr13 107151776 107151978 -13132334 + MamGypLTR2b LTR Gypsy 672 883 -39 2 1402 386 281 129 24 chr13 107152168 107152292 -13132020 - B1F SINE Alu -1 148 12 2 1402 1071 63 31 0 chr13 107152504 107152663 -13131649 + (TAGA)n Simple_repeat Simple_repeat 1 164 0 2 1402 3443 133 118 14 chr13 107153583 107154188 -13130124 + RLTR17 LTR ERVK 1 675 -17 2 1402 1967 29 4 12 chr13 107154188 107154430 -13129882 - L1_Mus1 LINE L1 0 6567 6328 2 1402 3443 133 118 14 chr13 107154430 107154451 -13129861 + RLTR17 LTR ERVK 676 692 0 2 1402 209 163 0 20 chr13 107154527 107154577 -13129735 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1402 1087 284 58 46 chr13 107155223 107155873 -13128439 - L1MA8 LINE L1 -4 6287 5630 2 1402 566 305 21 11 chr13 107156451 107156640 -13127672 + ORR1E LTR MaLR 1 191 -168 2 1402 486 310 30 41 chr13 107156737 107157003 -13127309 + L1MB2 LINE L1 5489 5751 -420 2 1402 619 241 75 31 chr13 107157029 107157256 -13127056 + L1MB2 LINE L1 5818 6054 -117 2 1402 394 288 50 88 chr13 107157260 107157420 -13126892 + RSINE1 SINE B4 12 165 0 2 1402 23 0 0 0 chr13 107157467 107157490 -13126822 + AT_rich Low_complexity Low_complexity 1 23 0 2 1402 1017 347 42 84 chr13 107157578 107158198 -13126114 - MER92B LTR ERV1 -42 594 1 2 1402 791 333 58 122 chr13 107158382 107158949 -13125363 - MLT2B3 LTR ERVL -2 552 22 2 1402 277 236 0 18 chr13 107158978 107159034 -13125278 + ID4 SINE ID 2 56 -27 2 1402 247 269 0 15 chr13 107159046 107159114 -13125198 + GA-rich Low_complexity Low_complexity 2 68 0 2 1402 590 284 62 72 chr13 107159500 107159689 -13124623 - MLT1B LTR MaLR -26 364 180 2 1402 330 87 0 0 chr13 107159689 107159735 -13124577 + (TTGG)n Simple_repeat Simple_repeat 2 47 0 2 1402 895 126 0 59 chr13 107159739 107159891 -13124421 - B1_Mus2 SINE Alu 0 147 5 2 1402 590 284 62 72 chr13 107159891 107160003 -13124309 - MLT1B LTR MaLR -211 179 64 2 1402 239 41 19 58 chr13 107161450 107161502 -13122810 + (TAA)n Simple_repeat Simple_repeat 2 51 0 2 1402 461 291 33 46 chr13 107161509 107161681 -13122631 - MTE2b LTR MaLR -214 165 1 2 1402 38107 9 0 2 chr13 107162788 107170196 -13114116 - L1Md_A LINE L1 0 6582 1 2 1402 4739 45 0 5 chr13 107170390 107170970 -13113342 + L1Md_F2 LINE L1 6005 6581 -1 2 1402 236 267 122 0 chr13 107171420 107171551 -13112761 + Lx9 LINE L1 7491 7637 -7 2 1402 36964 4 0 0 chr13 107171554 107176908 -13107404 + L1Md_A LINE L1 232 5586 -297 2 1402 9065 2 0 0 chr13 107176908 107177950 -13106362 + L1Md_A LINE L1 5587 6582 0 2 1402 205 263 134 21 chr13 107179234 107179331 -13104981 + L2b LINE L2 3260 3367 -8 2 1402 380 276 10 0 chr13 107179485 107179583 -13104729 - MER45R DNA Tip100 -1 1580 1482 2 1402 586 265 42 42 chr13 107179622 107179811 -13104501 + Tigger5 DNA MER2_type 2126 2314 -92 2 1402 537 16 0 0 chr13 107180124 107180186 -13104126 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1402 2348 127 30 20 chr13 107180249 107180650 -13103662 - RMER17A LTR ERVK 0 751 347 2 1402 624 27 0 0 chr13 107180651 107180725 -13103587 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 2 1402 198 103 0 0 chr13 107180725 107180753 -13103559 + (CAGA)n Simple_repeat Simple_repeat 2 30 0 2 1402 934 184 132 60 chr13 107180753 107181002 -13103310 - RLTR40 LTR ERVK -533 284 18 2 1402 963 290 36 50 chr13 107181001 107181302 -13103010 - RCHARR1 DNA MER1_type -675 299 3 2 1402 1251 240 144 106 chr13 107181795 107182275 -13102037 + RLTR18B LTR ERVK 13 510 -2 2 1402 222 403 52 15 chr13 107182370 107182506 -13101806 - MER5A DNA MER1_type -30 159 19 2 1402 234 341 71 0 chr13 107183442 107183527 -13100785 + RLTR20C LTR ERVK 345 435 -99 2 1402 1646 224 48 72 chr13 107183519 107184034 -13100278 - RLTR11A LTR ERVK -19 509 7 2 1402 2480 171 65 100 chr13 107184111 107184184 -13100128 - L1_Mur3 LINE L1 -1041 4839 4726 2 1402 230 0 33 0 chr13 107184184 107184214 -13100098 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2 1402 2480 171 65 100 chr13 107184214 107184892 -13099420 - L1_Mur3 LINE L1 -1155 4725 4115 2 1402 2184 176 185 20 chr13 107184889 107185000 -13099312 + L1_Mur3 LINE L1 4836 4948 -932 2 1402 194 0 39 0 chr13 107185000 107185026 -13099286 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2 1402 2184 176 185 20 chr13 107185026 107185504 -13098808 + L1_Mur3 LINE L1 4949 5521 -359 2 1402 251 191 13 93 chr13 107185485 107185560 -13098752 + Lx6 LINE L1 7377 7445 -15 2 1402 234 0 0 0 chr13 107186183 107186209 -13098103 + (CA)n Simple_repeat Simple_repeat 2 27 0 2 1402 877 285 17 90 chr13 107186527 107186816 -13097496 + B4A SINE B4 3 270 -22 2 1402 548 73 12 0 chr13 107186884 107186966 -13097346 + (TAGA)n Simple_repeat Simple_repeat 3 85 0 2 1402 272 331 258 0 chr13 107187654 107187817 -13096495 + Tigger5 DNA MER2_type 63 267 -2139 2 1402 350 333 18 0 chr13 107187797 107187911 -13096401 + Tigger5 DNA MER2_type 2291 2406 0 2 1402 24 0 0 0 chr13 107188421 107188445 -13095867 + AT_rich Low_complexity Low_complexity 1 24 0 2 1402 296 68 45 0 chr13 107189766 107189810 -13094502 + PB1D10 SINE Alu 70 115 -2 2 1402 231 213 0 90 chr13 107190298 107190365 -13093947 - MER101B LTR ERV1 -75 495 435 2 1402 1149 199 9 0 chr13 107190434 107190645 -13093667 + URR1A DNA MER1_type 1 213 -13 2 1402 28 86 0 0 chr13 107190963 107191033 -13093279 + AT_rich Low_complexity Low_complexity 1 70 0 2 1402 586 144 19 0 chr13 107191175 107191279 -13093033 + Lx3B LINE L1 6865 6970 -3 2 1402 396 0 0 0 chr13 107191283 107191327 -13092985 + (TAA)n Simple_repeat Simple_repeat 1 44 0 2 1402 246 274 0 0 chr13 107191464 107191526 -13092786 + BC1_Mm scRNA scRNA 22 83 -69 2 1402 185 291 12 0 chr13 107191685 107191771 -13092541 + GA-rich Low_complexity Low_complexity 2 88 0 2 1402 1074 118 8 0 chr13 107192437 107192703 -13091609 + (TAGA)n Simple_repeat Simple_repeat 1 268 0 2 1402 22 35 0 0 chr13 107193171 107193200 -13091112 + AT_rich Low_complexity Low_complexity 1 29 0 2 1402 403 345 27 33 chr13 107193281 107193431 -13090881 - B1F SINE Alu 0 149 1 2 1402 236 298 40 34 chr13 107193508 107193685 -13090627 - L1MEd LINE L1 -5067 1052 875 2 1402 713 166 18 6 chr13 107193688 107193858 -13090454 + (TA)n Simple_repeat Simple_repeat 2 173 0 2 1402 297 0 0 0 chr13 107193858 107193891 -13090421 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1402 24 32 0 0 chr13 107194503 107194534 -13089778 + AT_rich Low_complexity Low_complexity 1 31 0 2 1402 200 170 19 0 chr13 107194820 107194873 -13089439 + (TA)n Simple_repeat Simple_repeat 1 54 0 2 1402 279 0 0 0 chr13 107194873 107194904 -13089408 + (TAGA)n Simple_repeat Simple_repeat 2 32 0 2 1402 351 0 0 0 chr13 107196265 107196304 -13088008 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2 1402 310 203 14 0 chr13 107197306 107197380 -13086932 + L1_Mur3 LINE L1 5360 5434 -446 2 1402 385 278 30 53 chr13 107197403 107197536 -13086776 + B1_Mur1 SINE Alu 2 131 -18 2 1402 2335 91 22 3 chr13 107197605 107197867 -13086445 + ORR1A2 LTR MaLR 1 262 -65 2 1402 732 71 0 0 chr13 107197867 107197966 -13086346 + (TTTTC)n Simple_repeat Simple_repeat 2 100 0 2 1402 2335 91 22 3 chr13 107197966 107198024 -13086288 + ORR1A2 LTR MaLR 263 327 0 2 1402 1790 192 188 22 chr13 107198512 107198969 -13085343 + RMER15 LTR ERVL 43 575 0 2 1402 22 56 0 0 chr13 107199050 107199086 -13085226 + AT_rich Low_complexity Low_complexity 1 36 0 2 1402 315 0 0 0 chr13 107199290 107199325 -13084987 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1402 1866 139 53 13 chr13 107199506 107199986 -13084326 - RLTR11A LTR ERVK -2 526 1 2 1402 500 374 111 3 chr13 107200008 107200367 -13083945 - MLT1D LTR MaLR -107 398 1 2 1402 435 267 50 0 chr13 107200449 107200550 -13083762 - RSINE1 SINE B4 -35 130 25 2 1402 207 0 0 0 chr13 107200559 107200582 -13083730 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2 1402 3912 134 17 11 chr13 107200603 107201251 -13083061 - Lx3B LINE L1 -4 6969 6318 2 1402 5761 109 9 30 chr13 107201252 107202231 -13082081 + L1_Mur1 LINE L1 4571 5529 -357 2 1402 21 0 0 0 chr13 107204985 107205006 -13079306 + AT_rich Low_complexity Low_complexity 1 21 0 2 1402 272 368 56 17 chr13 107205196 107205428 -13078884 + L3b LINE CR1 1 241 -241 2 1402 395 331 52 37 chr13 107205794 107205985 -13078327 + MER63A DNA AcHobo 17 210 0 2 1402 291 306 147 11 chr13 107206251 107206598 -13077714 - L1M5 LINE L1 -843 5303 4910 2 1402 2452 93 3 0 chr13 107206649 107206972 -13077340 + ORR1A2 LTR MaLR 4 327 0 2 1402 269 283 80 0 chr13 107206978 107207116 -13077196 + L1ME2 LINE L1 5762 5910 -254 2 1402 258 32 0 0 chr13 107208516 107208547 -13075765 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1402 5338 134 14 6 chr13 107209133 107209972 -13074340 - Lx2B LINE L1 0 7000 6155 2 1402 17424 147 20 6 chr13 107209974 107213393 -13070919 - Lx2B LINE L1 -947 6053 2575 2 1402 8422 14 0 0 chr13 107213598 107214840 -13069472 - L1Md_A LINE L1 0 6582 5341 2 1402 378 0 0 0 chr13 107214922 107214964 -13069348 + (TC)n Simple_repeat Simple_repeat 1 42 0 2 1402 288 0 0 0 chr13 107214964 107214995 -13069317 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1402 2644 156 142 69 chr13 107215463 107216104 -13068208 + RMER6C LTR ERVK 1 688 -2 2 1402 3472 36 2 1 chr13 107216169 107216746 -13067566 + L1Md_F2 LINE L1 5429 6007 -575 2 175 1055 65 0 7 chr13 107216785 107216939 -13067373 + L1Md_F2 LINE L1 6430 6582 0 2 1403 713 200 7 58 chr13 107216944 107217098 -13067214 + RMER6D LTR ERVK 557 702 -18 2 1403 831 275 46 40 chr13 107217318 107217644 -13066668 + RLTR10D LTR ERVK 1 328 -31 2 1403 614 128 8 76 chr13 107217771 107217889 -13066423 + ORR1C2 LTR MaLR 275 384 0 2 1403 691 167 40 13 chr13 107217899 107218051 -13066261 + Lx3B LINE L1 6814 6969 -4 2 1403 6851 134 10 7 chr13 107218060 107219825 -13064487 + Lx LINE L1 4877 6648 -6 2 1403 22 35 0 0 chr13 107219872 107219901 -13064411 + AT_rich Low_complexity Low_complexity 1 29 0 2 1403 762 116 22 0 chr13 107219910 107220048 -13064264 + (TA)n Simple_repeat Simple_repeat 1 141 0 2 1403 552 30 0 0 chr13 107222595 107222661 -13061651 + (TTGG)n Simple_repeat Simple_repeat 4 69 0 2 1403 192 152 0 0 chr13 107223313 107223346 -13060966 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 1403 2304 156 157 4 chr13 107224205 107224688 -13059624 + Lx4A LINE L1 6501 7057 -1 3 1403 22 0 0 0 chr13 107224689 107224711 -13059601 + AT_rich Low_complexity Low_complexity 1 22 0 3 1403 3995 77 5 2 chr13 107224719 107225277 -13059035 - L1_Mur1 LINE L1 -224 5662 5103 3 1403 1768 77 60 19 chr13 107225277 107225542 -13058770 - L1Md_F2 LINE L1 -1 6581 6306 3 1403 243 79 0 0 chr13 107225800 107225838 -13058474 + (GCTG)n Simple_repeat Simple_repeat 2 39 0 3 1403 518 192 7 14 chr13 107225838 107226025 -13058287 + (TCTCTG)n Simple_repeat Simple_repeat 1 185 0 3 1403 522 46 0 0 chr13 107226025 107226090 -13058222 + (TA)n Simple_repeat Simple_repeat 2 66 0 3 1403 518 166 11 22 chr13 107226090 107226154 -13058158 + (TCTCTG)n Simple_repeat Simple_repeat 5 68 0 3 1403 603 196 0 0 chr13 107226171 107226329 -13057983 + CT-rich Low_complexity Low_complexity 1 158 0 3 1403 431 198 12 0 chr13 107226902 107226983 -13057329 + ORR1B2 LTR MaLR 5 86 -292 3 1403 1321 122 216 0 chr13 107227177 107227432 -13056880 + ORR1B2 LTR MaLR 58 367 0 3 1403 876 248 35 5 chr13 107228314 107228517 -13055795 + B3 SINE B2 1 209 -7 3 1403 579 230 32 7 chr13 107228562 107228742 -13055570 + L1MB2 LINE L1 5026 5223 -923 3 1403 412 262 14 56 chr13 107228829 107229027 -13055285 + L1MA4 LINE L1 5737 5924 -376 3 1403 261 0 0 0 chr13 107229193 107229222 -13055090 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 3 1403 936 296 37 43 chr13 107229231 107229566 -13054746 + L1MB2 LINE L1 5333 5662 -509 3 1403 806 297 10 0 chr13 107229566 107229775 -13054537 - B3 SINE B2 -5 211 1 3 1403 936 296 37 43 chr13 107229775 107229975 -13054337 + L1MB2 LINE L1 5663 5865 -306 3 1403 428 312 123 0 chr13 107230412 107230566 -13053746 - MER5A DNA MER1_type -12 177 5 3 1403 782 279 33 7 chr13 107230947 107231250 -13053062 - L1MA5 LINE L1 -411 5889 5579 3 1403 606 311 71 115 chr13 107231636 107231905 -13052407 + B4A SINE B4 9 265 -27 3 1403 381 102 0 0 chr13 107231910 107231969 -13052343 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1403 684 294 60 3 chr13 107232845 107233128 -13051184 + Lx7 LINE L1 7118 7416 -280 3 1403 341 292 21 35 chr13 107233173 107233315 -13050997 + Lx7 LINE L1 7539 7678 -18 3 1403 568 282 47 47 chr13 107233884 107234096 -13050216 - MTD LTR MaLR -205 214 3 3 1403 242 217 0 0 chr13 107234342 107234402 -13049910 + A-rich Low_complexity Low_complexity 1 60 0 3 1403 693 0 0 0 chr13 107234515 107234592 -13049720 + (GA)n Simple_repeat Simple_repeat 2 78 0 3 1403 2274 65 19 0 chr13 107235673 107235980 -13048332 - L1Md_F2 LINE L1 -364 6218 5906 3 1403 576 306 34 81 chr13 107236024 107236344 -13047968 + ORR1E LTR MaLR 55 359 0 3 1403 789 157 31 0 chr13 107237847 107238006 -13046306 - Lx2 LINE L1 -881 6116 5953 3 1403 1365 155 13 0 chr13 107238008 107238240 -13046072 + Lx2 LINE L1 6751 6985 -12 3 1403 819 324 102 31 chr13 107239331 107239713 -13044599 + MLT1E2 LTR MaLR 219 627 0 3 1403 378 366 129 37 chr13 107239901 107240181 -13044131 + LTR16C LTR ERVL 134 452 -37 3 1403 7390 40 35 0 chr13 107240181 107241108 -13043204 + L1Md_F2 LINE L1 5630 6582 0 3 1403 378 366 129 37 chr13 107241108 107241151 -13043161 + LTR16C LTR ERVL 453 489 0 3 1403 267 333 78 0 chr13 107241396 107241486 -13042826 + PB1D10 SINE Alu 4 100 -17 3 1403 2714 180 2 19 chr13 107241508 107242023 -13042289 - Lx4B LINE L1 -4 7054 6549 3 1403 209 135 0 26 chr13 107243705 107243743 -13040569 + (TTAAA)n Simple_repeat Simple_repeat 1 37 0 3 1403 370 285 63 50 chr13 107244208 107244367 -13039945 + MER5A DNA MER1_type 20 180 -9 3 1403 239 79 0 26 chr13 107244470 107244509 -13039803 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 3 1403 3051 149 34 43 chr13 107244656 107245238 -13039074 + RLTR20B3 LTR ERVK 1 577 0 3 1403 636 295 153 4 chr13 107246588 107246626 -13037686 + B4 SINE B4 1 38 -254 3 1403 1637 137 17 20 chr13 107246626 107246924 -13037388 + L1_Mus1 LINE L1 6271 6567 0 3 1403 757 275 44 0 chr13 107246924 107247127 -13037185 + B4A SINE B4 39 278 -14 3 1403 216 0 0 0 chr13 107247131 107247155 -13037157 + (CA)n Simple_repeat Simple_repeat 2 25 0 3 1403 366 171 0 0 chr13 107247861 107247931 -13036381 + CT-rich Low_complexity Low_complexity 5 74 0 3 1403 848 10 10 0 chr13 107248039 107248140 -13036172 + (GAAA)n Simple_repeat Simple_repeat 3 104 0 3 1403 31183 95 18 10 chr13 107248144 107254858 -13029454 + Lx3_Mus LINE L1 216 6992 -17 3 1403 240 35 0 0 chr13 107255297 107255326 -13028986 + (TC)n Simple_repeat Simple_repeat 1 29 0 3 1403 6214 90 24 5 chr13 107255357 107256277 -13028035 - Lx LINE L1 0 6654 5718 3 1403 211 239 48 103 chr13 107256519 107256645 -13027667 - MIR SINE MIR -32 230 112 3 1403 534 31 0 0 chr13 107256754 107256818 -13027494 + (GGGA)n Simple_repeat Simple_repeat 3 66 0 3 1403 32 57 0 0 chr13 107257006 107257059 -13027253 + AT_rich Low_complexity Low_complexity 1 53 0 3 1403 380 226 46 19 chr13 107257262 107257370 -13026942 + MTD LTR MaLR 10 120 -301 3 1403 438 306 0 16 chr13 107257370 107257491 -13026821 + B3 SINE B2 2 120 -96 3 1403 1830 132 81 6 chr13 107257491 107257811 -13026501 + ORR1A1 LTR MaLR 1 344 -2 3 1403 329 294 35 98 chr13 107257811 107257915 -13026397 + B3 SINE B2 117 211 -5 3 1403 1412 212 61 0 chr13 107257923 107258216 -13026096 + MTD LTR MaLR 109 419 0 3 1403 24 32 0 0 chr13 107258527 107258558 -13025754 + AT_rich Low_complexity Low_complexity 1 31 0 3 1403 2262 112 12 0 chr13 107258559 107258881 -13025431 - ORR1A3 LTR MaLR 0 326 1 3 1403 265 333 43 0 chr13 107258940 107259033 -13025279 + Lx8 LINE L1 6253 6349 -1124 3 1403 356 366 72 21 chr13 107259272 107259509 -13024803 - L3 LINE CR1 -40 4449 4201 3 1403 324 0 0 0 chr13 107260001 107260037 -13024275 + (CA)n Simple_repeat Simple_repeat 2 37 0 3 1403 1556 187 90 67 chr13 107260419 107260610 -13023702 + ORR1C1 LTR MaLR 1 181 -197 3 1403 807 40 0 0 chr13 107260610 107260709 -13023603 + (TC)n Simple_repeat Simple_repeat 1 99 0 3 1403 1556 187 90 67 chr13 107260709 107260873 -13023439 + ORR1C1 LTR MaLR 182 364 -14 3 1403 522 0 0 0 chr13 107261813 107261871 -13022441 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 1403 267 122 0 0 chr13 107261871 107261919 -13022393 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1403 21 0 0 0 chr13 107261993 107262014 -13022298 + AT_rich Low_complexity Low_complexity 1 21 0 3 1403 221 305 65 51 chr13 107262447 107262585 -13021727 + L2a LINE L2 3035 3174 -252 3 1403 7239 107 47 17 chr13 107262595 107263720 -13020592 - Lx2 LINE L1 -1 6996 5838 3 1403 2725 183 94 34 chr13 107264188 107264826 -13019486 + Lx9 LINE L1 6818 7498 -146 3 1403 432 67 0 0 chr13 107264826 107264886 -13019426 + (TATG)n Simple_repeat Simple_repeat 3 62 0 3 1403 2725 183 94 34 chr13 107264886 107264908 -13019404 + Lx9 LINE L1 7499 7519 -125 3 1403 462 88 0 0 chr13 107264908 107264976 -13019336 + (CATA)n Simple_repeat Simple_repeat 3 70 0 3 1403 2725 183 94 34 chr13 107264976 107265088 -13019224 + Lx9 LINE L1 7520 7638 -6 3 1403 495 125 17 43 chr13 107267013 107267130 -13017182 + RMER17B LTR ERVK 347 460 -498 3 1403 995 52 41 0 chr13 107268250 107268422 -13015890 + (GA)n Simple_repeat Simple_repeat 2 180 0 3 1403 231 36 0 0 chr13 107269530 107269558 -13014754 + (GA)n Simple_repeat Simple_repeat 1 28 0 3 1403 1761 220 173 20 chr13 107269843 107270218 -13014094 + Lx7 LINE L1 7048 7418 -278 3 1403 405 0 0 0 chr13 107270218 107270263 -13014049 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1403 1761 220 173 20 chr13 107270263 107270448 -13013864 + Lx7 LINE L1 7419 7693 -3 3 1403 22 35 0 0 chr13 107270453 107270482 -13013830 + AT_rich Low_complexity Low_complexity 1 29 0 3 1403 745 363 92 24 chr13 107270806 107271297 -13013015 + MER90a LTR ERV1 72 595 -19 3 1403 738 329 73 59 chr13 107271751 107271857 -13012455 - MLT2B4 LTR ERVL -184 336 219 3 1403 3294 33 15 0 chr13 107271857 107272247 -13012065 - MTA_Mm LTR MaLR 0 396 1 3 1403 738 302 68 57 chr13 107272247 107272470 -13011842 - MLT2B4 LTR ERVL -325 231 1 3 1403 748 264 50 33 chr13 107274548 107274728 -13009584 - B3A SINE B2 -4 194 12 3 1403 232 270 26 51 chr13 107274659 107274737 -13009575 - B4A SINE B4 -211 81 6 3 1403 808 86 60 0 chr13 107274783 107274900 -13009412 + B2_Mm2 SINE B2 62 185 -10 3 1403 5261 112 17 42 chr13 107274926 107275757 -13008555 - Lx3C LINE L1 -2 6974 6165 3 1403 211 339 93 23 chr13 107276128 107276300 -13008012 + L2 LINE L2 2490 2673 -746 3 1403 3967 57 0 4 chr13 107276765 107277260 -13007052 - L1Md_F2 LINE L1 -12 6570 6078 3 1403 291 305 25 17 chr13 107277860 107277980 -13006332 + MIRc SINE MIR 7 127 -141 3 1403 301 280 60 51 chr13 107278814 107278975 -13005337 + MER5A DNA MER1_type 4 189 0 3 1403 278 222 31 16 chr13 107279825 107279889 -13004423 + PB1D10 SINE Alu 14 78 -39 3 1403 201 74 0 0 chr13 107279900 107279927 -13004385 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 3 1403 384 277 0 0 chr13 107280024 107280107 -13004205 - MLT1D LTR MaLR -167 338 256 3 1403 272 196 0 0 chr13 107280237 107280283 -13004029 + L2a LINE L2 3370 3415 -11 3 1403 709 348 73 15 chr13 107280597 107280924 -13003388 + MLT1D LTR MaLR 82 427 -78 3 1403 300 294 89 40 chr13 107281211 107281335 -13002977 + MLT1D LTR MaLR 381 510 -2 3 1403 351 44 0 0 chr13 107281906 107281951 -13002361 + (CAGA)n Simple_repeat Simple_repeat 4 48 0 3 1403 32846 99 12 11 chr13 107282219 107288580 -12995732 - L1Md_F2 LINE L1 0 6582 213 3 1403 255 288 137 46 chr13 107288716 107288869 -12995443 + MER58B DNA MER1_type 172 338 -3 3 1403 434 305 0 7 chr13 107288895 107289017 -12995295 - B1F1 SINE Alu 0 120 3 3 1403 267 356 0 0 chr13 107288954 107289027 -12995285 - B4 SINE B4 -142 150 78 3 1403 757 311 60 46 chr13 107289087 107289355 -12994957 + L1MA4 LINE L1 5345 5618 -682 3 1403 2218 112 16 0 chr13 107289355 107289677 -12994635 - ORR1A2 LTR MaLR 0 327 1 3 1403 757 311 60 46 chr13 107289677 107289995 -12994317 + L1MA4 LINE L1 5619 5939 -361 3 1403 357 384 13 7 chr13 107290176 107290328 -12993984 + B4A SINE B4 1 153 -139 3 1403 401 250 259 0 chr13 107290396 107290512 -12993800 + RSINE1 SINE B4 1 146 -19 3 1403 1287 78 0 0 chr13 107290518 107290803 -12993509 + (CA)n Simple_repeat Simple_repeat 1 285 0 3 1403 235 281 16 0 chr13 107290803 107290867 -12993445 + GA-rich Low_complexity Low_complexity 1 65 0 3 1403 417 260 160 21 chr13 107290889 107291176 -12993136 + L1MC3 LINE L1 7459 7785 0 4 1403 1069 89 14 0 chr13 107292755 107292901 -12991411 + B1_Mus1 SINE Alu 1 148 0 4 1403 935 118 7 22 chr13 107294419 107294557 -12989755 - B1_Mur3 SINE Alu -13 136 1 4 1403 874 93 7 20 chr13 107294601 107294754 -12989558 + (GA)n Simple_repeat Simple_repeat 2 152 0 4 1403 452 284 120 53 chr13 107294811 107295186 -12989126 - RLTR28B LTR ERVL -38 443 44 4 1403 1585 225 75 14 chr13 107295349 107295709 -12988603 - MTD LTR MaLR 0 419 38 4 1403 1581 230 125 42 chr13 107295870 107296319 -12987993 + RMER19C LTR ERVK 126 611 0 4 1403 4736 40 2 0 chr13 107296653 107297248 -12987064 + L1Md_F2 LINE L1 5959 6554 -28 4 1403 287 49 24 0 chr13 107297248 107297289 -12987023 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1403 21 0 0 0 chr13 107297894 107297915 -12986397 + AT_rich Low_complexity Low_complexity 1 21 0 4 1403 22 0 0 0 chr13 107297934 107297956 -12986356 + AT_rich Low_complexity Low_complexity 1 22 0 4 1403 322 309 77 77 chr13 107298313 107298495 -12985817 - B3A SINE B2 -16 182 1 4 1403 3417 28 2 2 chr13 107298529 107298925 -12985387 - MTA_Mm LTR MaLR 0 396 1 4 1403 478 216 0 56 chr13 107300875 107300983 -12983329 + ID_B1 SINE B4 120 221 -3 4 1403 209 214 17 26 chr13 107300992 107301107 -12983205 + GA-rich Low_complexity Low_complexity 2 115 0 4 1403 481 133 49 24 chr13 107301419 107301542 -12982770 - Lx9 LINE L1 0 7644 7519 4 1403 255 31 0 0 chr13 107301542 107301574 -12982738 + (TG)n Simple_repeat Simple_repeat 2 33 0 4 1403 332 133 17 0 chr13 107301576 107301636 -12982676 - Lx9 LINE L1 -170 7474 7414 4 1403 1812 235 36 31 chr13 107302093 107302510 -12981802 - MTD LTR MaLR 0 419 1 4 1403 629 101 47 0 chr13 107302558 107302706 -12981606 + (TAGA)n Simple_repeat Simple_repeat 4 158 0 4 1403 333 0 0 0 chr13 107302780 107302817 -12981495 + (TA)n Simple_repeat Simple_repeat 2 38 0 4 1403 213 185 61 12 chr13 107302876 107302958 -12981354 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 4 1403 578 175 21 7 chr13 107302972 107303116 -12981196 + GA-rich Low_complexity Low_complexity 3 148 0 4 1403 298 310 0 89 chr13 107303828 107303952 -12980360 + L2c LINE L2 3275 3387 0 4 1403 1086 116 0 0 chr13 107304396 107304543 -12979769 + B1_Mus1 SINE Alu 2 148 0 4 1403 202 29 57 0 chr13 107304543 107304578 -12979734 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 4 1403 279 314 29 73 chr13 107304669 107304875 -12979437 + MIRb SINE MIR 59 255 -13 4 1403 221 306 148 0 chr13 107306041 107306149 -12978163 + MIR SINE MIR 81 204 -58 4 1403 270 325 46 54 chr13 107306150 107306280 -12978032 - MLT1B LTR MaLR -2 388 260 4 1403 61 45 0 0 chr13 107306280 107306369 -12977943 + AT_rich Low_complexity Low_complexity 1 89 0 4 1403 567 325 42 47 chr13 107306394 107306607 -12977705 + B4 SINE B4 40 251 -41 4 1403 451 143 28 56 chr13 107307106 107307284 -12977028 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 4 1403 4088 9 0 0 chr13 107307284 107307742 -12976570 - L1Md_A LINE L1 0 6582 6125 4 1403 477 0 0 0 chr13 107308351 107308404 -12975908 + (TG)n Simple_repeat Simple_repeat 1 53 0 4 1403 289 168 103 21 chr13 107308418 107308515 -12975797 + Lx9 LINE L1 7534 7638 -6 4 1403 463 227 94 60 chr13 107308665 107308899 -12975413 - L1_Rod LINE L1 -1232 4615 4374 4 1403 2866 234 85 26 chr13 107308917 107309542 -12974770 + Lx9 LINE L1 5453 6147 -1497 4 1403 5641 68 15 8 chr13 107309542 107310283 -12974029 + L1_Mus2 LINE L1 5820 6565 -1 4 1403 2866 290 132 39 chr13 107310283 107311477 -12972835 + Lx9 LINE L1 6148 7461 -183 4 1403 345 47 0 0 chr13 107311480 107311523 -12972789 + (CATA)n Simple_repeat Simple_repeat 2 44 0 4 1403 21 36 0 0 chr13 107311635 107311663 -12972649 + AT_rich Low_complexity Low_complexity 1 28 0 4 1403 891 193 29 110 chr13 107311940 107312185 -12972127 + URR1B DNA MER1_type 1 225 0 4 1403 21 71 0 0 chr13 107312274 107312316 -12971996 + AT_rich Low_complexity Low_complexity 1 42 0 4 1403 219 296 0 0 chr13 107312588 107312642 -12971670 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1403 705 12 0 0 chr13 107314649 107314731 -12969581 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 4 1403 192 77 0 0 chr13 107316326 107316352 -12967960 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 4 1403 39467 7 0 1 chr13 107316411 107323440 -12960872 - L1Md_A LINE L1 0 6582 1 4 1403 616 209 70 0 chr13 107323712 107323827 -12960485 + RLTR11A2 LTR ERVK 1 123 -404 4 1403 1062 106 0 0 chr13 107323827 107323968 -12960344 + B1_Mus1 SINE Alu 1 141 -7 4 1403 789 200 5 76 chr13 107323968 107324155 -12960157 + RLTR11A2 LTR ERVK 110 259 -268 4 1403 565 167 11 40 chr13 107324155 107324330 -12959982 + GA-rich Low_complexity Low_complexity 4 173 0 4 1403 1568 145 75 17 chr13 107324330 107324624 -12959688 + RLTR11A2 LTR ERVK 217 527 0 4 1403 406 191 11 0 chr13 107325160 107325254 -12959058 + L1M2 LINE L1 3688 3782 -2361 4 1403 1196 63 0 54 chr13 107325256 107325424 -12958888 + B2_Mm2 SINE B2 1 159 -36 4 1403 465 19 0 0 chr13 107325424 107325478 -12958834 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 4 1403 976 268 72 111 chr13 107325498 107326221 -12958091 + Lx9 LINE L1 4336 5030 -817 4 1403 1119 133 14 41 chr13 107326228 107326448 -12957864 - Lx2 LINE L1 0 6997 6784 4 1403 1888 105 74 57 chr13 107326450 107326803 -12957509 + Lx2 LINE L1 6464 6822 -175 4 1403 646 243 24 38 chr13 107326800 107327037 -12957275 + Lx9 LINE L1 5016 5319 -824 4 1403 1275 241 87 101 chr13 107327046 107327132 -12957180 + Lx4B LINE L1 6400 6485 -573 4 1403 2077 106 20 7 chr13 107327132 107327437 -12956875 - RLTR27 LTR ERVK 0 309 1 4 1403 1275 241 87 101 chr13 107327437 107327995 -12956317 + Lx4B LINE L1 6486 7035 -23 4 1403 842 125 7 34 chr13 107328075 107328224 -12956088 + URR1A DNA MER1_type 82 226 0 4 1403 1682 225 70 15 chr13 107328274 107328865 -12955447 + Lx9 LINE L1 5366 6027 -1617 4 1403 229 288 55 0 chr13 107329070 107329143 -12955169 + Lx9 LINE L1 6364 6440 -1204 4 1403 1819 190 89 25 chr13 107329173 107329456 -12954856 - MTD LTR MaLR -15 404 126 4 1403 227 0 91 0 chr13 107329456 107329489 -12954823 + (TAAAA)n Simple_repeat Simple_repeat 3 38 0 4 1403 1819 203 75 26 chr13 107329489 107329597 -12954715 - MTD LTR MaLR -294 125 1 4 1403 470 252 0 0 chr13 107329612 107329715 -12954597 + Lx9 LINE L1 6806 6908 -736 4 1403 3223 179 68 110 chr13 107329718 107330571 -12953741 - RLTR40 LTR ERVK 0 817 1 4 1403 1303 278 94 68 chr13 107330576 107331291 -12953021 + Lx9 LINE L1 6912 7644 0 4 1403 754 289 139 19 chr13 107331329 107331703 -12952609 + L1_Rod LINE L1 5429 5847 0 4 1403 1065 84 7 0 chr13 107331915 107332057 -12952255 - B1_Mus1 SINE Alu 0 148 6 4 1403 296 313 84 47 chr13 107332057 107332248 -12952064 - L1MB5 LINE L1 -105 6069 5872 4 1403 260 266 110 145 chr13 107332565 107332710 -12951602 - MLT1A0 LTR MaLR -157 208 69 4 1403 209 351 119 9 chr13 107333181 107333391 -12950921 + MIRb SINE MIR 35 267 -1 4 1403 447 225 48 48 chr13 107333411 107333556 -12950756 + MER3 DNA MER1_type 1 145 -64 4 1403 2463 154 21 11 chr13 107333687 107334121 -12950191 + BGLII_B LTR ERVK 4 441 0 4 1403 197 274 59 12 chr13 107335094 107335179 -12949133 - MIRb SINE MIR -78 190 102 4 1403 231 295 15 62 chr13 107336432 107336497 -12947815 - ID4 SINE ID -14 69 8 4 1403 666 0 0 0 chr13 107336499 107336573 -12947739 + (TC)n Simple_repeat Simple_repeat 1 74 0 4 1403 441 0 0 0 chr13 107337315 107337364 -12946948 + (TC)n Simple_repeat Simple_repeat 2 50 0 4 1403 504 0 0 0 chr13 107337364 107337419 -12946893 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1403 711 307 35 14 chr13 107337426 107337700 -12946612 - L1M2 LINE L1 -536 5764 5482 4 1403 213 39 0 0 chr13 107337700 107337726 -12946586 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 4 1403 711 301 65 25 chr13 107337726 107337894 -12946418 - L1M2 LINE L1 -816 5481 5304 4 1403 297 0 0 0 chr13 107338424 107338457 -12945855 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1403 249 33 0 0 chr13 107338960 107338990 -12945322 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 4 1403 257 288 15 0 chr13 107339989 107340055 -12944257 + GA-rich Low_complexity Low_complexity 1 67 0 4 1403 333 327 0 0 chr13 107340586 107340687 -12943625 - Lx8 LINE L1 -898 6575 6475 4 1403 70 56 0 21 chr13 107340791 107340936 -12943376 + AT_rich Low_complexity Low_complexity 1 142 0 4 1403 198 156 0 0 chr13 107340942 107340987 -12943325 + (TAA)n Simple_repeat Simple_repeat 1 45 0 4 1403 3061 234 30 20 chr13 107342254 107343055 -12941257 + Lx9 LINE L1 6289 7097 -547 4 1403 1434 248 32 87 chr13 107343055 107343595 -12940717 + RLTR11A2 LTR ERVK 1 526 -2 4 1403 544 255 86 16 chr13 107343624 107343811 -12940501 + Lx9 LINE L1 7089 7288 -356 4 1403 522 283 0 61 chr13 107343914 107344061 -12940251 - ID_B1 SINE B4 0 224 87 4 1403 1637 165 59 14 chr13 107344108 107344460 -12939852 - ORR1A4 LTR MaLR 0 374 1 4 1403 462 243 160 28 chr13 107344953 107345097 -12939215 - RSINE1 SINE B4 -1 164 2 4 1403 641 373 78 82 chr13 107345143 107345669 -12938643 - MLT1F LTR MaLR -23 525 2 4 1403 684 310 71 47 chr13 107345888 107346294 -12938018 - Lx8 LINE L1 -6 7467 7052 4 1403 387 229 115 9 chr13 107346294 107346419 -12937893 - B1_Mus2 SINE Alu -13 136 1 4 1403 753 328 72 15 chr13 107346543 107346877 -12937435 + MLT1B LTR MaLR 1 353 -37 4 1403 315 0 0 0 chr13 107347213 107347248 -12937064 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 1403 317 243 81 0 chr13 107347263 107347409 -12936903 - Lx8 LINE L1 -1755 5889 5727 4 1404 408 212 24 0 chr13 107348597 107348682 -12935630 - ID_B1 SINE B4 0 224 138 4 1404 278 296 60 77 chr13 107348682 107348714 -12935598 - PB1D7 SINE Alu 0 120 6 4 1404 1101 92 0 0 chr13 107349958 107350100 -12934212 + B1_Mus1 SINE Alu 1 142 -6 4 1404 504 0 0 0 chr13 107350101 107350157 -12934155 + (GGA)n Simple_repeat Simple_repeat 3 58 0 4 1404 657 289 19 0 chr13 107350214 107350370 -12933942 + RSINE1 SINE B4 3 161 -4 4 1404 553 244 59 59 chr13 107350408 107350630 -12933682 - Charlie5 DNA MER1_type -86 2538 2317 4 1404 3243 201 68 25 chr13 107353073 107353838 -12930474 + Lx5 LINE L1 6251 7048 -2 4 1404 228 135 0 0 chr13 107353951 107353988 -12930324 + (TAA)n Simple_repeat Simple_repeat 3 39 0 4 1404 255 31 0 0 chr13 107354296 107354328 -12929984 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 1404 704 246 157 24 chr13 107354337 107354624 -12929688 - Lx8 LINE L1 0 7473 7149 4 1404 315 0 0 0 chr13 107355063 107355098 -12929214 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 4 1404 300 127 56 14 chr13 107355354 107355426 -12928886 + GA-rich Low_complexity Low_complexity 5 79 0 5 1404 1094 158 352 24 chr13 107355563 107355741 -12928571 + RMER10B LTR ERVL 1 194 -204 5 1404 519 17 0 0 chr13 107355741 107355801 -12928511 + (TC)n Simple_repeat Simple_repeat 1 60 0 5 1404 1094 158 352 24 chr13 107355801 107355920 -12928392 + RMER10B LTR ERVL 195 395 -3 5 1404 443 221 127 18 chr13 107356321 107356487 -12927825 - Lx8 LINE L1 -2 7471 7288 5 1404 369 355 56 67 chr13 107356898 107357167 -12927145 + L3 LINE CR1 3911 4176 -313 5 1404 1221 109 5 37 chr13 107357199 107357390 -12926922 + B2_Mm2 SINE B2 2 186 -9 5 1404 1059 88 0 0 chr13 107357397 107357545 -12926767 + (GAAA)n Simple_repeat Simple_repeat 1 148 0 5 1404 300 360 79 30 chr13 107357980 107358283 -12926029 + L2c LINE L2 3057 3374 -13 5 1404 371 160 0 13 chr13 107358941 107359017 -12925295 + GA-rich Low_complexity Low_complexity 3 77 0 5 1404 300 398 66 36 chr13 107359296 107359463 -12924849 - LTR33 LTR ERVL -240 275 104 5 1404 275 274 143 0 chr13 107359767 107359792 -12924520 - ID_B1 SINE B4 -127 97 2 5 1404 295 237 17 0 chr13 107359792 107359851 -12924461 - ID4 SINE ID -22 61 2 5 1404 250 359 54 27 chr13 107360161 107360310 -12924002 - MIRb SINE MIR -10 258 106 5 1404 282 346 19 0 chr13 107361500 107361604 -12922708 - Tigger5 DNA MER2_type 0 2406 2301 5 1404 1479 56 0 0 chr13 107361706 107361904 -12922408 - L1Md_F2 LINE L1 -649 5935 5738 5 1404 5451 42 0 0 chr13 107361904 107362552 -12921760 + L1Md_F2 LINE L1 5921 6568 -14 5 1404 222 37 0 0 chr13 107362558 107362585 -12921727 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1404 438 278 56 0 chr13 107362588 107362696 -12921616 - Tigger5 DNA MER2_type -2271 135 22 5 1404 1783 213 39 103 chr13 107363157 107363224 -12921088 + MTD LTR MaLR 13 80 -339 5 1404 5918 132 89 28 chr13 107363224 107364264 -12920048 + Lx4A LINE L1 5953 7056 -2 5 1404 1783 213 39 103 chr13 107364264 107364631 -12919681 + MTD LTR MaLR 81 419 0 5 1404 268 311 130 34 chr13 107365507 107365736 -12918576 + Charlie8 DNA MER1_type 66 295 -36 5 1404 936 286 68 23 chr13 107365920 107366271 -12918041 - Lx8 LINE L1 -2 7471 7105 5 1404 467 72 0 0 chr13 107367846 107367915 -12916397 - L1_Mus3 LINE L1 -252 6386 6318 5 1404 1097 78 162 0 chr13 107367915 107368094 -12916218 + L1_Mus3 LINE L1 6424 6631 -7 5 1404 228 309 29 14 chr13 107369556 107369625 -12914687 - ID4 SINE ID -6 77 8 5 1404 6078 132 12 1 chr13 107369999 107370984 -12913328 - L1_Mm LINE L1 -62 5821 4826 5 1404 8585 172 14 125 chr13 107370982 107371556 -12912756 - L1VL4 LINE L1 -2196 3690 3167 5 1404 4752 48 0 2 chr13 107371556 107372135 -12912177 - L1Md_F2 LINE L1 -3 6579 6002 5 1404 9432 115 20 29 chr13 107372135 107373939 -12910373 - L1VL4 LINE L1 -2720 3166 1578 5 1404 34876 68 3 2 chr13 107373958 107380191 -12904121 - L1Md_F3 LINE L1 -14 6570 369 5 1404 3345 137 5 11 chr13 107380191 107381134 -12903178 - L1VL4 LINE L1 -2322 1592 658 5 1404 296 221 292 7 chr13 107382431 107382568 -12901744 - MTD LTR MaLR 0 419 244 5 1404 482 228 47 31 chr13 107382574 107382701 -12901611 - RMER13A LTR ERVK -719 141 13 5 1404 294 235 0 12 chr13 107382704 107382786 -12901526 + L1M2 LINE L1 5529 5609 -703 5 1404 250 246 75 30 chr13 107382826 107382960 -12901352 + L1M2 LINE L1 5689 5828 -472 5 1404 3514 46 14 2 chr13 107384032 107384472 -12899840 + L1Md_F3 LINE L1 6126 6570 -14 5 1404 6000 125 40 22 chr13 107385339 107385610 -12898702 + Lx4A LINE L1 6054 6331 -727 5 1404 1899 138 21 45 chr13 107385610 107385945 -12898367 - ORR1A2 LTR MaLR 0 327 1 5 1404 6000 125 40 22 chr13 107385945 107386661 -12897651 + Lx4A LINE L1 6332 7058 0 5 1404 1067 108 0 0 chr13 107386854 107387002 -12897310 + B1_Mus1 SINE Alu 1 148 0 5 1404 1325 111 0 48 chr13 107387076 107387163 -12897149 - URR1A DNA MER1_type 0 226 147 5 1404 4854 70 12 5 chr13 107387163 107387811 -12896501 + L1_Mus1 LINE L1 5915 6567 0 5 1404 1325 111 0 48 chr13 107387811 107387932 -12896380 - URR1A DNA MER1_type -80 146 28 5 1404 21 0 0 0 chr13 107388762 107388783 -12895529 + AT_rich Low_complexity Low_complexity 1 21 0 5 1404 3365 72 0 2 chr13 107388861 107389266 -12895046 + L1_Mus2 LINE L1 6163 6566 0 5 1404 1354 20 0 0 chr13 107389799 107389946 -12894366 + B1_Mus2 SINE Alu 1 147 0 5 1404 180 0 0 0 chr13 107390003 107390023 -12894289 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1404 7561 78 14 1 chr13 107390249 107391354 -12892958 - L1_Mus1 LINE L1 -1 6566 5447 5 1404 8638 27 0 0 chr13 107391463 107392724 -12891588 - L1Md_T LINE L1 0 6582 5350 5 1404 971 236 106 79 chr13 107392799 107392961 -12891351 - MTE2a LTR MaLR 0 379 193 5 1404 234 0 0 0 chr13 107392961 107392987 -12891325 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 5 1404 971 236 106 79 chr13 107392987 107393192 -12891120 - MTE2a LTR MaLR -187 192 3 5 1404 544 87 39 0 chr13 107394546 107394649 -12889663 + (CAGAGA)n Simple_repeat Simple_repeat 6 112 0 5 1404 372 200 0 0 chr13 107394693 107394773 -12889539 + GA-rich Low_complexity Low_complexity 2 81 0 5 1404 316 300 129 10 chr13 107395022 107395123 -12889189 + PB1D10 SINE Alu 3 115 -2 5 1404 5874 189 32 62 chr13 107395225 107395281 -12889031 + Lx7 LINE L1 6475 6532 -1164 5 1404 3286 71 13 0 chr13 107395281 107395676 -12888636 + MTB LTR MaLR 1 400 0 5 1404 5874 189 32 62 chr13 107395676 107396879 -12887433 + Lx7 LINE L1 6533 7696 0 5 1404 1028 270 0 0 chr13 107396898 107397113 -12887199 + B3 SINE B2 1 215 -1 5 1404 5538 65 4 61 chr13 107397625 107398432 -12885880 + L1Md_T LINE L1 252 1012 -5510 5 1404 37619 29 2 0 chr13 107398428 107403630 -12880682 + L1Md_F2 LINE L1 416 5586 -297 5 1404 8929 31 2 2 chr13 107403630 107404625 -12879687 + L1Md_F2 LINE L1 5587 6581 -1 5 1404 2603 27 0 0 chr13 107404634 107404933 -12879379 + L1Md_T LINE L1 5288 5586 -297 5 1404 8572 41 16 0 chr13 107404933 107405911 -12878401 + L1Md_T LINE L1 5587 6580 -2 5 1404 34819 56 2 1 chr13 107405911 107410403 -12873909 + L1Md_T LINE L1 999 5589 -297 5 1404 8795 43 0 0 chr13 107410403 107411397 -12872915 + L1Md_T LINE L1 5590 6583 -2 5 1404 17866 73 6 0 chr13 107411398 107413718 -12870594 + L1Md_F2 LINE L1 3255 5586 -297 5 1404 8544 50 2 1 chr13 107413718 107414712 -12869600 + L1Md_F2 LINE L1 5587 6581 -1 5 1404 318 273 60 80 chr13 107414822 107414973 -12869339 + Arthur1B DNA Tip100 23 170 -1055 5 1404 672 350 251 15 chr13 107415058 107415391 -12868921 + Arthur1B DNA Tip100 215 626 -599 5 1404 1551 228 7 10 chr13 107415628 107415934 -12868378 + Lx5 LINE L1 6742 7046 -4 5 1404 504 0 0 0 chr13 107416130 107416186 -12868126 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 5 1404 576 309 58 18 chr13 107416209 107416433 -12867879 - MLT1A0 LTR MaLR -132 233 1 5 1404 517 296 44 15 chr13 107416510 107416647 -12867665 + RSINE1 SINE B4 25 165 0 5 1404 612 179 0 0 chr13 107416648 107416804 -12867508 + (CA)n Simple_repeat Simple_repeat 2 157 0 5 1404 37234 40 16 11 chr13 107416808 107418443 -12865869 - L1Md_T LINE L1 0 6582 4920 5 1404 225 183 46 77 chr13 107418443 107418508 -12865804 + RMER20A LTR ERVK 186 248 -268 5 1404 37234 40 16 11 chr13 107418508 107422160 -12862152 - L1Md_T LINE L1 0 4919 1203 5 1404 8114 67 1 16 chr13 107422126 107423214 -12861098 - L1Md_Gf LINE L1 -5380 1142 72 5 1404 443 264 8 16 chr13 107423500 107423627 -12860685 - ORR1E LTR MaLR -232 127 2 5 1404 592 224 88 15 chr13 107423756 107423892 -12860420 + B1F SINE Alu 1 146 -3 5 1404 228 306 0 0 chr13 107424334 107424383 -12859929 - B1F2 SINE Alu -96 53 5 5 1404 3899 209 54 14 chr13 107424586 107425481 -12858831 + Lx9 LINE L1 6713 7642 -2 5 1404 15649 59 8 1 chr13 107425709 107428332 -12855980 + L1_Mus2 LINE L1 3918 6560 -6 5 1404 533 15 15 0 chr13 107428332 107428398 -12855914 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 5 1404 763 221 86 35 chr13 107428688 107428885 -12855427 + B3 SINE B2 3 209 -7 5 1404 594 325 106 16 chr13 107429671 107429927 -12854385 + LTR86B1 LTR ERVL 1 279 -214 5 1404 4307 5 0 0 chr13 107430052 107430501 -12853811 + L1Md_A LINE L1 6134 6582 0 5 1404 441 341 59 92 chr13 107430576 107430847 -12853465 + B4A SINE B4 8 269 -23 5 1404 537 92 0 0 chr13 107430848 107430924 -12853388 + (CA)n Simple_repeat Simple_repeat 1 76 0 5 1404 192 152 0 0 chr13 107430985 107431018 -12853294 + GA-rich Low_complexity Low_complexity 1 33 0 5 1404 330 219 0 0 chr13 107432251 107432356 -12851956 + (CA)n Simple_repeat Simple_repeat 2 106 0 5 1404 609 209 0 0 chr13 107432377 107432540 -12851772 + (CA)n Simple_repeat Simple_repeat 1 163 0 5 1404 21 0 0 0 chr13 107433230 107433251 -12851061 + AT_rich Low_complexity Low_complexity 1 21 0 5 1404 196 376 0 0 chr13 107433812 107433897 -12850415 + L2b LINE L2 3284 3368 -7 5 1404 434 306 60 34 chr13 107433926 107434075 -12850237 - RSINE1 SINE B4 -9 156 4 5 1404 871 65 202 8 chr13 107434482 107434606 -12849706 + B1_Mus1 SINE Alu 1 148 0 5 1404 4040 54 19 0 chr13 107434644 107435107 -12849205 + MT2C_Mm LTR ERVL 4 475 0 5 1404 6777 56 2 4 chr13 107435373 107436174 -12848138 + L1_Mus3 LINE L1 5837 6636 -2 5 1404 1194 213 68 52 chr13 107436719 107437220 -12847092 - RMER2 LTR ERV1 -5 562 1 5 1404 371 262 137 41 chr13 107438354 107438573 -12845739 + L1MA6 LINE L1 5962 6201 -99 5 1404 576 42 0 0 chr13 107438658 107438729 -12845583 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 5 1404 27656 33 2 0 chr13 107440305 107445901 -12838411 + L1Md_T LINE L1 1 5589 -297 5 1404 9601 5 0 0 chr13 107445901 107446897 -12837415 + L1Md_T LINE L1 5590 6585 0 5 1404 2125 177 56 5 chr13 107447172 107447547 -12836765 + ORR1B1 LTR MaLR 1 394 0 5 1404 4779 142 11 45 chr13 107447624 107449075 -12835237 + L1VL4 LINE L1 483 1850 -2067 5 1404 527 285 101 42 chr13 107449360 107449712 -12834600 + L1_Mur3 LINE L1 3455 3823 -2057 5 1404 1088 118 128 5 chr13 107449714 107449901 -12834411 + Lx4A LINE L1 6849 7058 0 5 1404 3611 294 50 30 chr13 107449937 107451550 -12832762 + L1_Mur3 LINE L1 3847 5491 -389 5 1404 269 276 178 76 chr13 107451548 107451705 -12832607 + Lx8 LINE L1 6615 6787 -686 5 1404 446 217 24 32 chr13 107451705 107451829 -12832483 - MER34A1 LTR ERV1 -439 148 26 5 1404 1568 137 294 7 chr13 107452844 107453029 -12831283 + RMER10B LTR ERVL 1 224 -174 5 1404 777 103 0 0 chr13 107453029 107453155 -12831157 + (TC)n Simple_repeat Simple_repeat 2 127 0 5 1404 1568 137 294 7 chr13 107453155 107453278 -12831034 + RMER10B LTR ERVL 225 398 0 5 1404 241 105 0 0 chr13 107453671 107453709 -12830603 + L1Md_A LINE L1 288 325 -6291 5 1404 36826 45 12 5 chr13 107453710 107458792 -12825520 + L1Md_A LINE L1 466 5586 -297 5 1404 8982 34 0 0 chr13 107458792 107459787 -12824525 + L1Md_A LINE L1 5587 6581 -1 5 1404 503 234 11 71 chr13 107460102 107460291 -12824021 + RLTR19-int LTR ERVK 987 1331 -1907 5 1404 275 125 0 0 chr13 107460383 107460423 -12823889 + RLTR19-int LTR ERVK 2019 2058 -4079 5 1404 342 162 37 24 chr13 107460392 107460474 -12823838 + RLTR19-int LTR ERVK 1342 1424 -1814 5 1404 461 241 114 52 chr13 107460501 107460711 -12823601 + RLTR19-int LTR ERVK 1895 2117 -3405 5 1404 1536 156 57 0 chr13 107460707 107460989 -12823323 + RLTR19-int LTR ERVK 2330 2627 -3510 5 1404 332 313 48 12 chr13 107461042 107461207 -12823105 + MER5B DNA MER1_type 7 177 -1 5 1404 3638 29 0 0 chr13 107461443 107461910 -12822402 - L1Md_F3 LINE L1 -583 6001 5534 5 1404 6226 44 16 0 chr13 107461903 107462658 -12821654 + L1Md_F3 LINE L1 4763 5529 -354 5 1404 1282 35 7 0 chr13 107462661 107462806 -12821506 - B1_Mm SINE Alu -1 146 1 5 1404 904 229 45 39 chr13 107462813 107463149 -12821163 - RLTR15 LTR ERVK -21 338 1 5 1404 27 0 0 0 chr13 107463199 107463226 -12821086 + AT_rich Low_complexity Low_complexity 1 27 0 6 1404 468 0 0 0 chr13 107463416 107463468 -12820844 + (TC)n Simple_repeat Simple_repeat 2 53 0 6 1404 441 0 0 0 chr13 107463468 107463516 -12820796 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1404 2261 105 12 61 chr13 107463756 107464102 -12820210 + ORR1A4 LTR MaLR 1 329 0 6 1404 195 100 0 0 chr13 107464922 107464952 -12819360 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 6 1404 668 267 78 17 chr13 107464954 107465133 -12819179 - ID_B1 SINE B4 -33 191 2 6 1404 261 0 0 0 chr13 107465340 107465369 -12818943 + (CCTG)n Simple_repeat Simple_repeat 3 31 0 6 1404 416 299 144 22 chr13 107465505 107465775 -12818537 - L1ME3A LINE L1 -96 6077 5775 6 1404 417 39 0 0 chr13 107466788 107466839 -12817473 + (CA)n Simple_repeat Simple_repeat 2 52 0 6 1404 347 327 26 0 chr13 107467109 107467222 -12817090 - MER103 DNA DNA -2 164 49 6 1404 340 254 0 0 chr13 107467235 107467306 -12817006 - PB1D10 SINE Alu -15 102 32 6 1404 800 198 7 12 chr13 107467332 107467479 -12816833 + B3 SINE B2 1 133 -62 6 1404 622 265 0 80 chr13 107467495 107467671 -12816641 - RSINE1 SINE B4 0 165 4 6 1404 369 0 0 0 chr13 107468197 107468238 -12816074 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 6 1404 1152 251 99 30 chr13 107468919 107469321 -12814991 - Lx8 LINE L1 -17 7456 7027 6 1404 3589 33 5 0 chr13 107469321 107469715 -12814597 - MTA_Mm LTR MaLR 0 396 1 6 1404 35939 48 0 4 chr13 107469715 107475178 -12809134 + L1Md_T LINE L1 53 5589 -297 6 1404 9063 31 0 0 chr13 107475178 107476174 -12808138 + L1Md_T LINE L1 5590 6585 0 6 1404 881 228 73 10 chr13 107476211 107476415 -12807897 - Lx8 LINE L1 -435 7038 6822 6 1404 1762 261 67 28 chr13 107476642 107476729 -12807583 + Lx7 LINE L1 6803 6889 -807 6 1404 545 0 15 0 chr13 107476729 107476794 -12807518 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 1404 1762 261 67 28 chr13 107476794 107477246 -12807066 + Lx7 LINE L1 6890 7362 -334 6 1404 253 304 17 59 chr13 107477281 107477400 -12806912 + Lx7 LINE L1 7565 7678 -18 6 1404 23 54 0 0 chr13 107477972 107478009 -12806303 + AT_rich Low_complexity Low_complexity 1 37 0 6 1404 471 312 0 0 chr13 107478172 107478310 -12806002 + RSINE1 SINE B4 28 165 0 6 1405 477 0 0 0 chr13 107479139 107479192 -12805120 + (CA)n Simple_repeat Simple_repeat 2 54 0 6 1405 189 0 0 0 chr13 107480301 107480322 -12803990 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1405 267 311 13 13 chr13 107480905 107481058 -12803254 + GA-rich Low_complexity Low_complexity 2 154 0 6 1405 362 323 29 52 chr13 107481997 107482170 -12802142 - L1M2c LINE L1 -2017 5147 4979 6 1405 293 237 80 75 chr13 107482225 107482412 -12801900 + L1M2 LINE L1 3202 3389 -2754 6 1405 312 270 0 0 chr13 107482433 107482507 -12801805 + ID4 SINE ID 8 81 -2 6 1405 665 276 107 24 chr13 107482523 107482753 -12801559 - L1M2c LINE L1 -3545 3619 3369 6 1405 4280 93 16 4 chr13 107482753 107483313 -12800999 + RMER2 LTR ERV1 1 567 0 6 1405 665 276 107 24 chr13 107483313 107483420 -12800892 - L1M2c LINE L1 -3796 3368 3254 6 1405 412 257 183 58 chr13 107483489 107484398 -12799914 - L1M2c LINE L1 -4044 3124 2069 6 1405 198 0 0 0 chr13 107484398 107484420 -12799892 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1405 282 283 130 29 chr13 107484420 107484678 -12799634 - L1M2c LINE L1 -5100 2068 1759 6 1405 426 39 0 0 chr13 107484789 107484841 -12799471 + (GTTTG)n Simple_repeat Simple_repeat 2 53 0 6 1405 866 45 18 0 chr13 107484853 107484965 -12799347 - B1_Mus1 SINE Alu -34 114 1 6 1405 13861 83 39 3 chr13 107485776 107488380 -12795932 + L1VL2 LINE L1 285 2989 -626 6 1405 3687 20 5 0 chr13 107488388 107488782 -12795530 + MTA_Mm LTR MaLR 1 396 0 6 1405 22 0 0 0 chr13 107489347 107489369 -12794943 + AT_rich Low_complexity Low_complexity 1 22 0 6 1405 285 29 0 0 chr13 107489464 107489498 -12794814 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6 1405 235 135 160 4 chr13 107489764 107489833 -12794479 + ID_B1 SINE B4 86 161 -131 6 1405 190 250 26 53 chr13 107490575 107490651 -12793661 - L2 LINE L2 -2084 1335 1262 6 1405 1143 121 37 27 chr13 107490656 107490843 -12793469 + ORR1B1 LTR MaLR 206 394 0 6 1405 1993 184 77 21 chr13 107491294 107491671 -12792641 - RMER10B LTR ERVL 0 398 1 6 1405 495 296 55 51 chr13 107492722 107493014 -12791298 + LTR37B LTR ERV1 171 463 -5 6 1405 253 312 66 46 chr13 107493080 107493231 -12791081 - MIR SINE MIR 0 262 109 6 1405 585 0 0 0 chr13 107494048 107494113 -12790199 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 6 1405 572 260 195 20 chr13 107494130 107494383 -12789929 + Charlie1a DNA MER1_type 5 287 -1168 6 1405 1966 164 16 75 chr13 107494384 107494760 -12789552 - ORR1B1 LTR MaLR 0 394 41 6 1405 7888 46 16 15 chr13 107494869 107495817 -12788495 + L1Md_F2 LINE L1 5633 6581 -1 6 1405 1419 251 115 11 chr13 107495867 107496242 -12788070 + MTD LTR MaLR 6 419 0 6 1405 1068 283 52 26 chr13 107496297 107496718 -12787594 + Charlie1 DNA MER1_type 1867 2298 -483 6 1405 315 0 0 0 chr13 107496897 107496932 -12787380 + (TG)n Simple_repeat Simple_repeat 1 35 0 6 1405 405 0 0 0 chr13 107496932 107496976 -12787336 + (GA)n Simple_repeat Simple_repeat 1 45 0 6 1405 8489 186 80 8 chr13 107497992 107499973 -12784339 - Lx6 LINE L1 0 7460 5318 6 1405 758 179 20 40 chr13 107500012 107500163 -12784149 - B1_Mur4 SINE Alu 0 150 3 1 1405 284 233 0 142 chr13 107500168 107500288 -12784024 - L1_Mur3 LINE L1 -583 5297 5195 2 1405 318 167 26 0 chr13 107500282 107500360 -12783952 - L1_Mur3 LINE L1 -6790 938 859 2 1405 1500 295 111 8 chr13 107500354 107500981 -12783331 - L1_Mur3 LINE L1 -7047 681 17 2 1405 489 34 0 0 chr13 107501026 107501085 -12783227 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1405 231 309 0 50 chr13 107502279 107502378 -12781934 + MER34A1 LTR ERV1 6 99 -488 4 1405 528 260 47 0 chr13 107502382 107502509 -12781803 + B3A SINE B2 18 150 -48 5 1405 482 0 17 0 chr13 107502514 107502572 -12781740 + (CA)n Simple_repeat Simple_repeat 2 60 0 6 1405 582 292 66 5 chr13 107502612 107502808 -12781504 + MER34A1 LTR ERV1 144 351 -236 4 1405 272 286 99 16 chr13 107503332 107503453 -12780859 + MER34A1 LTR ERV1 438 568 -3 4 1405 188 229 61 20 chr13 107504295 107504344 -12779968 + MER5B DNA MER1_type 128 178 0 7 1405 547 239 45 26 chr13 107504530 107504685 -12779627 + RSINE1 SINE B4 2 159 -6 8 1405 5209 32 16 0 chr13 107504716 107505338 -12778974 + L1Md_F3 LINE L1 5940 6571 -13 9 1405 225 0 0 0 chr13 107505376 107505401 -12778911 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 1 1405 536 180 0 48 chr13 107505401 107505506 -12778806 + B1_Mur1 SINE Alu 28 127 -22 1 1405 192 216 0 0 chr13 107505516 107505567 -12778745 + GA-rich Low_complexity Low_complexity 5 55 0 1 1405 185 224 40 20 chr13 107506172 107506222 -12778090 - L3 LINE CR1 -1333 3156 3106 1 1405 283 279 103 28 chr13 107506278 107506385 -12777927 - PB1D10 SINE Alu -2 115 1 1 1405 525 172 10 0 chr13 107507064 107507163 -12777149 + B4 SINE B4 1 100 -192 1 1405 536 241 35 57 chr13 107507181 107507432 -12776880 + RLTR12B LTR ERVK 47 270 -258 1 1405 306 0 0 0 chr13 107507967 107508001 -12776311 + (CA)n Simple_repeat Simple_repeat 1 34 0 1 1405 1328 186 167 118 chr13 107508582 107509014 -12775298 - MT2A LTR ERVL -75 458 6 1 1405 311 269 2 2 chr13 107509231 107509330 -12774982 + L1_Rod LINE L1 5334 5439 -444 1 1405 1160 273 114 42 chr13 107509533 107509938 -12774374 + Lx8 LINE L1 7039 7472 -1 2 1405 4401 52 9 25 chr13 107510483 107511053 -12773259 + L1Md_F2 LINE L1 6018 6578 -4 2 1405 257 109 0 0 chr13 107511060 107511106 -12773206 + L1_Mur1 LINE L1 3689 3734 -2152 2 1405 980 120 13 0 chr13 107511118 107511300 -12773012 + L1_Mus4 LINE L1 5783 5975 -663 2 1405 477 34 0 0 chr13 107511592 107511651 -12772661 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1405 268 305 41 34 chr13 107512323 107512469 -12771843 - MER34 LTR ERV1 -67 475 329 2 1405 264 344 62 62 chr13 107512554 107512749 -12771563 - MER34 LTR ERV1 -367 204 10 2 1405 478 140 88 0 chr13 107512834 107512938 -12771374 + PB1D10 SINE Alu 1 120 0 2 1405 249 108 0 0 chr13 107514264 107514301 -12770011 + (TTCC)n Simple_repeat Simple_repeat 4 40 0 2 1405 1191 252 62 56 chr13 107514314 107514688 -12769624 + MTEa LTR MaLR 3 378 -1 2 1405 1884 75 93 117 chr13 107515101 107515216 -12769096 + ORR1A2 LTR MaLR 3 83 -244 2 1405 1688 26 0 0 chr13 107515216 107515406 -12768906 - B2_Mm1t SINE B2 -3 190 1 3 1405 1884 75 93 117 chr13 107515406 107515623 -12768689 + ORR1A2 LTR MaLR 84 327 0 2 1405 1010 39 0 0 chr13 107515975 107516102 -12768210 + L1_Mus1 LINE L1 6440 6566 -1 3 1405 251 319 47 74 chr13 107516232 107516381 -12767931 + MER5A1 DNA MER1_type 16 160 -6 3 1405 284 323 10 10 chr13 107516643 107516740 -12767572 + MER5B DNA MER1_type 3 99 -79 3 1405 3835 172 8 8 chr13 107516960 107517587 -12766725 - Lx5 LINE L1 -141 6909 6283 3 1405 4421 144 51 11 chr13 107517599 107518647 -12765665 - Lx5 LINE L1 -952 6098 5043 3 1405 419 359 138 9 chr13 107518691 107518916 -12765396 + MLT1H LTR MaLR 38 291 -258 3 1405 5456 77 25 4 chr13 107519211 107519943 -12764369 + Lx3_Mus LINE L1 6260 7006 -3 3 1405 660 192 56 0 chr13 107520016 107520141 -12764171 - B1_Mur2 SINE Alu -11 138 7 3 1405 6045 121 49 2 chr13 107520143 107521058 -12763254 - RMER17B LTR ERVK 0 958 1 3 1405 871 316 18 7 chr13 107521579 107521867 -12762445 + Lx9 LINE L1 7034 7455 -189 3 1405 342 0 0 0 chr13 107521867 107521905 -12762407 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1405 734 337 67 19 chr13 107521905 107522036 -12762276 + Lx9 LINE L1 7331 7472 -1 3 1405 338 312 9 18 chr13 107522124 107522238 -12762074 + PB1D10 SINE Alu 2 114 -3 4 1405 415 241 61 105 chr13 107522642 107522814 -12761498 - MTE2a LTR MaLR -39 340 177 4 1405 252 0 0 0 chr13 107522814 107522842 -12761470 + (CA)n Simple_repeat Simple_repeat 2 29 0 4 1405 671 0 0 12 chr13 107522968 107523048 -12761264 + (TTTTC)n Simple_repeat Simple_repeat 2 80 0 4 1405 291 267 84 114 chr13 107523543 107523674 -12760638 + PB1 SINE Alu 1 127 0 4 1405 459 0 0 0 chr13 107524981 107525032 -12759280 + (GA)n Simple_repeat Simple_repeat 1 51 0 4 1405 440 194 10 39 chr13 107525947 107526049 -12758263 - RLTR19 LTR ERVK 0 499 401 4 1405 2582 107 100 6 chr13 107526051 107526161 -12758151 + RLTR47_MM LTR ERV1 1 120 -412 4 1405 6376 55 9 1 chr13 107526161 107526952 -12757360 - L1Md_F2 LINE L1 0 6582 5786 4 1405 2582 107 100 6 chr13 107526952 107527319 -12756993 + RLTR47_MM LTR ERV1 121 522 -10 4 1405 1238 142 33 9 chr13 107527329 107527542 -12756770 - RLTR19 LTR ERVK -108 391 174 4 1405 843 20 0 0 chr13 107527620 107527721 -12756591 + (GTTTG)n Simple_repeat Simple_repeat 2 102 0 5 1405 764 50 0 0 chr13 107527721 107527821 -12756491 - B1_Mus2 SINE Alu -9 138 39 5 1405 1057 126 26 37 chr13 107528434 107528623 -12755689 - RLTR19 LTR ERVK -312 187 1 4 1405 1166 291 9 40 chr13 107529327 107529486 -12754826 + MTE2b LTR MaLR 33 182 -197 5 1405 2709 138 2 62 chr13 107529486 107529940 -12754372 - RLTR23 LTR ERV1 -3 427 1 5 1405 1166 291 9 40 chr13 107529940 107530127 -12754185 + MTE2b LTR MaLR 183 368 -11 5 1405 260 342 62 43 chr13 107530155 107530366 -12753946 + ORR1E LTR MaLR 72 286 -73 5 1405 1806 140 79 52 chr13 107530691 107531060 -12753252 - ORR1C2 LTR MaLR 0 384 6 5 1405 1230 251 31 29 chr13 107531076 107531457 -12752855 + L1M2 LINE L1 5389 5770 -530 5 1405 276 30 0 0 chr13 107531473 107531506 -12752806 + (TG)n Simple_repeat Simple_repeat 1 33 0 5 1405 261 0 0 0 chr13 107531957 107531986 -12752326 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1405 297 0 0 0 chr13 107532026 107532059 -12752253 + (TTTTTG)n Simple_repeat Simple_repeat 5 37 0 5 1405 544 209 7 43 chr13 107532113 107532253 -12752059 - B3 SINE B2 -4 212 78 6 1405 552 30 0 0 chr13 107532342 107532408 -12751904 + (CA)n Simple_repeat Simple_repeat 2 67 0 6 1405 3422 35 5 0 chr13 107532408 107532802 -12751510 - MTA_Mm LTR MaLR 0 396 1 6 1405 240 150 0 0 chr13 107532929 107532969 -12751343 + MLT2F LTR ERVL 524 563 0 6 1405 6845 93 43 4 chr13 107533159 107534144 -12750168 + L1_Mus3 LINE L1 5652 6634 -4 6 1405 5913 35 0 0 chr13 107534228 107534917 -12749395 + L1Md_T LINE L1 5894 6582 0 6 1405 360 281 40 74 chr13 107534920 107535073 -12749239 + B4A SINE B4 123 291 -1 6 1405 237 108 0 0 chr13 107535105 107535142 -12749170 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 6 1405 350 197 0 0 chr13 107535694 107535760 -12748552 + 5S rRNA rRNA 24 89 -32 6 1405 765 294 108 37 chr13 107536330 107536758 -12747554 + LTR40b LTR ERVL 5 462 0 6 1405 684 36 0 0 chr13 107538593 107538676 -12745636 + (TC)n Simple_repeat Simple_repeat 1 83 0 7 1405 184 354 25 12 chr13 107538826 107538906 -12745406 + MIRb SINE MIR 53 133 -135 7 1405 347 193 5 46 chr13 107539129 107539228 -12745084 - B4A SINE B4 -60 232 137 7 1405 230 200 53 35 chr13 107539640 107539697 -12744615 - PB1D7 SINE Alu -1 119 62 7 1405 667 290 11 33 chr13 107539649 107539831 -12744481 - ID_B1 SINE B4 -8 216 39 7 1405 22 0 0 0 chr13 107540613 107540635 -12743677 + AT_rich Low_complexity Low_complexity 1 22 0 7 1405 1305 90 5 0 chr13 107541322 107541511 -12742801 + MT2B2 LTR ERVL 1 190 -394 7 1405 684 126 0 0 chr13 107541509 107541612 -12742700 - B2_Mm2 SINE B2 -88 107 5 7 1405 2874 68 15 0 chr13 107541613 107542009 -12742303 + MT2B2 LTR ERVL 175 576 -8 7 1405 357 291 52 19 chr13 107542082 107542236 -12742076 - Tigger13a DNA MER2_type -417 354 196 7 1405 914 193 80 15 chr13 107542607 107542807 -12741505 - B3 SINE B2 0 216 4 7 1405 2084 118 42 60 chr13 107543754 107544087 -12740225 - ORR1A2 LTR MaLR 0 327 1 8 1405 245 320 27 0 chr13 107544941 107545016 -12739296 + ID4 SINE ID 1 77 -6 8 1405 369 0 0 0 chr13 107545084 107545125 -12739187 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1405 187 368 79 0 chr13 107545649 107545763 -12738549 + MIRc SINE MIR 23 145 -123 8 1405 356 331 81 0 chr13 107546007 107546155 -12738157 - MIR SINE MIR -59 203 44 8 1405 1029 217 59 0 chr13 107546473 107546676 -12737636 + B3 SINE B2 2 216 0 8 1405 549 292 126 71 chr13 107547320 107547400 -12736912 - B4A SINE B4 -6 286 218 8 1405 252 86 0 0 chr13 107547400 107547435 -12736877 + (ATTG)n Simple_repeat Simple_repeat 2 36 0 8 1405 549 292 126 71 chr13 107547435 107547623 -12736689 - B4A SINE B4 -75 217 3 8 1405 435 191 22 0 chr13 107548169 107548258 -12736054 - ID_B1 SINE B4 -20 204 114 8 1405 660 197 17 0 chr13 107548646 107548763 -12735549 + B1_Mur1 SINE Alu 3 121 -28 8 1405 243 323 20 51 chr13 107548760 107548813 -12735499 + B3 SINE B2 94 146 -70 9 1405 411 21 0 0 chr13 107548813 107548861 -12735451 + (CA)n Simple_repeat Simple_repeat 1 48 0 9 1405 243 323 20 51 chr13 107548861 107548905 -12735407 + B3 SINE B2 147 188 -28 9 1405 764 216 144 0 chr13 107548924 107549105 -12735207 + B3 SINE B2 2 208 -8 9 1405 540 73 0 0 chr13 107549554 107549636 -12734676 + (TC)n Simple_repeat Simple_repeat 1 82 0 9 1405 198 103 0 0 chr13 107551944 107551973 -12732339 + (CA)n Simple_repeat Simple_repeat 1 29 0 9 1405 241 161 74 0 chr13 107552040 107552121 -12732191 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 9 1405 322 195 53 9 chr13 107552127 107552362 -12731950 + (CA)n Simple_repeat Simple_repeat 1 245 0 9 1405 432 0 0 0 chr13 107552428 107552476 -12731836 + (TG)n Simple_repeat Simple_repeat 2 49 0 9 1405 285 51 0 0 chr13 107554629 107554668 -12729644 + (TG)n Simple_repeat Simple_repeat 1 39 0 9 1405 468 0 0 0 chr13 107554668 107554719 -12729593 + (GA)n Simple_repeat Simple_repeat 1 52 0 9 1405 1455 39 0 0 chr13 107555903 107556081 -12728231 + (TCTCCC)n Simple_repeat Simple_repeat 3 180 0 1 1405 270 342 68 0 chr13 107556964 107557081 -12727231 - MER70B LTR ERVL -134 444 320 1 1405 396 267 8 94 chr13 107558302 107558430 -12725882 - MER5A1 DNA MER1_type 0 166 50 1 1405 340 248 301 0 chr13 107558716 107558869 -12725443 - B3A SINE B2 -17 199 1 1 1405 469 264 32 43 chr13 107559068 107559254 -12725058 - MLT1D LTR MaLR -117 388 205 1 1405 8109 37 14 0 chr13 107559254 107560479 -12723833 - L1Md_F2 LINE L1 -4 6578 5329 1 1405 3565 75 0 4 chr13 107560472 107560957 -12723355 + L1_Mm LINE L1 1897 2379 -3504 1 1405 287 340 61 6 chr13 107560957 107561120 -12723192 - MLT1D LTR MaLR -440 187 16 1 1405 1250 91 16 11 chr13 107561548 107561574 -12722738 - B2_Mm1t SINE B2 -4 189 165 1 1405 198 0 0 0 chr13 107561574 107561596 -12722716 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 1 1405 1250 91 16 11 chr13 107561596 107561757 -12722555 - B2_Mm1t SINE B2 -29 164 2 1 1405 546 269 79 28 chr13 107562042 107562294 -12722018 + MLT1C LTR MaLR 49 313 -154 1 1405 453 205 90 52 chr13 107562406 107562540 -12721772 - B1F SINE Alu -1 148 10 1 1405 301 188 100 14 chr13 107562542 107562612 -12721700 + MLT1C LTR MaLR 315 390 0 1 1405 2237 27 0 11 chr13 107562643 107562907 -12721405 - L1_Mus1 LINE L1 0 6567 6307 1 1405 593 289 83 68 chr13 107564582 107564908 -12719404 - MLT1A0 LTR MaLR -2 363 33 1 1405 2561 121 66 30 chr13 107565060 107565486 -12718826 - BGLII_B LTR ERVK 0 441 1 1 1405 6974 155 66 7 chr13 107565486 107566815 -12717497 - MYSERV16_I-int LTR ERVK 0 2326 919 1 1405 226 308 51 13 chr13 107566822 107566901 -12717411 + B1F SINE Alu 5 86 -63 1 1405 3036 75 2 5 chr13 107567055 107567456 -12716856 - MTB LTR MaLR 0 400 1 1 1405 650 288 78 61 chr13 107568360 107568755 -12715557 + L1MCb LINE L1 489 890 -5155 1 1405 510 31 0 0 chr13 107569172 107569236 -12715076 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 1 1405 396 0 0 0 chr13 107569236 107569279 -12715033 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1405 631 162 9 9 chr13 107570193 107570299 -12714013 - U6 snRNA snRNA 0 107 2 1 1405 684 251 12 6 chr13 107570387 107570559 -12713753 - B3 SINE B2 0 216 44 1 1405 3123 70 2 12 chr13 107570566 107570982 -12713330 + L1Md_F2 LINE L1 6171 6582 0 1 1405 11229 57 10 4 chr13 107570985 107572605 -12711707 + Lx3_Mus LINE L1 5383 7009 0 1 1405 183 42 0 0 chr13 107572614 107572638 -12711674 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1 1405 263 200 0 0 chr13 107572648 107572693 -12711619 - B3 SINE B2 -171 45 1 1 1405 212 189 62 75 chr13 107572835 107572915 -12711397 + PB1D10 SINE Alu 38 116 -1 1 1405 244 132 18 36 chr13 107573194 107573249 -12711063 + (CAAA)n Simple_repeat Simple_repeat 3 56 0 1 1405 284 268 14 0 chr13 107573755 107573826 -12710486 + L1MCa LINE L1 1650 1721 -4787 1 1405 245 281 52 40 chr13 107573854 107574022 -12710290 + B4 SINE B4 1 165 0 1 1405 2175 301 26 54 chr13 107574036 107574469 -12709843 + Lx8 LINE L1 6590 7016 -457 1 1405 2519 84 3 0 chr13 107574469 107574791 -12709521 - ORR1A2 LTR MaLR -4 323 1 1 1405 2175 301 26 54 chr13 107574791 107575257 -12709055 + Lx8 LINE L1 7017 7463 -10 1 1405 3308 53 83 20 chr13 107575413 107575860 -12708452 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1405 3566 85 15 33 chr13 107575861 107576772 -12707540 + IAPEz-int LTR ERVK 9 662 -5819 1 1405 2659 71 12 3 chr13 107576772 107577111 -12707201 + IAPEz-int LTR ERVK 1359 1700 -4781 1 1405 6546 61 14 1 chr13 107577106 107577923 -12706389 + IAPEz-int LTR ERVK 5653 6479 -2 1 1405 3192 62 88 20 chr13 107577925 107578370 -12705942 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1405 198 0 0 0 chr13 107578417 107578439 -12705873 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 1 1405 704 188 8 8 chr13 107578439 107578573 -12705739 - B1_Mur4 SINE Alu -13 137 4 1 1405 495 202 283 0 chr13 107578780 107578953 -12705359 + ID_B1 SINE B4 3 224 0 1 1405 325 205 25 13 chr13 107580275 107580354 -12703958 - ID4 SINE ID -3 80 1 1 1405 13618 102 18 24 chr13 107580354 107580797 -12703515 - L1_Mm LINE L1 -861 5022 4614 1 1405 655 159 24 166 chr13 107580797 107581008 -12703304 - B2_Mm2 SINE B2 -14 181 1 1 1405 13618 102 18 24 chr13 107581008 107582631 -12701681 - L1_Mm LINE L1 -1270 4613 2967 1 1405 271 221 286 0 chr13 107582635 107582712 -12701600 + B4A SINE B4 109 207 -85 1 1405 471 229 0 0 chr13 107582715 107582833 -12701479 + GA-rich Low_complexity Low_complexity 1 118 0 1 1405 573 28 0 0 chr13 107582883 107582954 -12701358 + (TG)n Simple_repeat Simple_repeat 1 71 0 1 1405 2344 142 17 37 chr13 107583909 107584311 -12700001 - ORR1B1 LTR MaLR 0 394 1 1 1405 218 314 41 76 chr13 107586451 107586596 -12697716 - ID_B1 SINE B4 -1 223 84 1 1405 5440 84 96 1 chr13 107587003 107587796 -12696516 + L1Md_A LINE L1 5648 6499 -83 1 1405 207 100 0 0 chr13 107589134 107589164 -12695148 + (TA)n Simple_repeat Simple_repeat 2 31 0 1 1405 259 256 93 101 chr13 107589740 107589879 -12694433 - RSINE1 SINE B4 -24 141 4 1 1405 1868 55 0 29 chr13 107590065 107590307 -12694005 + L1_Mus1 LINE L1 6333 6567 0 1 1405 387 0 0 0 chr13 107590615 107590658 -12693654 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1405 270 0 0 0 chr13 107590658 107590687 -12693625 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1405 401 238 48 0 chr13 107591692 107591797 -12692515 - PB1D7 SINE Alu -9 111 2 1 1405 284 156 39 9 chr13 107592884 107592946 -12691366 + PB1D9 SINE Alu 51 111 -9 1 1405 715 319 29 4 chr13 107593758 107594038 -12690274 - B4 SINE B4 -5 287 1 1 1405 263 211 91 55 chr13 107594099 107594209 -12690103 - PB1D10 SINE Alu -2 115 2 1 1405 319 246 118 44 chr13 107594327 107594463 -12689849 - Charlie1a DNA MER1_type -235 1220 1075 1 1405 2042 136 51 8 chr13 107594544 107594914 -12689398 + ORR1B1 LTR MaLR 1 386 -8 1 1405 908 238 124 46 chr13 107594947 107595422 -12688890 - Charlie1a DNA MER1_type -481 974 463 1 1405 315 0 0 0 chr13 107597692 107597727 -12686585 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1405 300 215 89 0 chr13 107597849 107597928 -12686384 + B3 SINE B2 131 216 0 1 1405 1261 41 0 0 chr13 107598172 107598319 -12685993 - B1_Mus2 SINE Alu 0 147 1 1 1405 228 274 11 77 chr13 107598538 107598629 -12685683 - PB1D10 SINE Alu 0 117 33 1 1405 447 270 159 19 chr13 107599168 107599376 -12684936 + MER44A DNA MER2_type 103 339 0 1 1405 309 51 0 0 chr13 107599698 107599737 -12684575 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1 1405 241 257 14 14 chr13 107599747 107599818 -12684494 - L2a LINE L2 0 3426 3356 1 1405 428 234 103 28 chr13 107600391 107600536 -12683776 + ORR1D1 LTR MaLR 1 156 -218 1 1405 228 67 0 0 chr13 107601123 107601153 -12683159 + (CAA)n Simple_repeat Simple_repeat 3 32 0 1 1405 279 215 0 0 chr13 107601155 107601220 -12683092 + GA-rich Low_complexity Low_complexity 3 67 0 1 1405 573 161 114 87 chr13 107601896 107602080 -12682232 - B2_Mm2 SINE B2 -4 191 3 1 1405 776 246 37 81 chr13 107602541 107602837 -12681475 + B4A SINE B4 3 285 -7 1 1405 910 160 21 0 chr13 107604128 107604272 -12680040 + B1_Mus1 SINE Alu 2 148 0 1 1405 715 148 0 0 chr13 107604351 107604466 -12679846 - B3A SINE B2 -79 119 5 1 1405 477 0 0 0 chr13 107604542 107604595 -12679717 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1405 2200 154 8 15 chr13 107604613 107605015 -12679297 + MTB_Mm LTR MaLR 7 405 -2 1 1405 321 189 11 22 chr13 107605031 107605123 -12679189 + CT-rich Low_complexity Low_complexity 3 93 0 1 1405 1298 220 29 13 chr13 107605805 107606113 -12678199 - MTD LTR MaLR -106 313 1 1 1405 280 212 30 0 chr13 107606185 107606251 -12678061 - ID4 SINE ID 0 83 16 1 1405 366 335 150 19 chr13 107606369 107606676 -12677636 + MLT1L LTR MaLR 158 504 -106 1 1405 2600 228 92 21 chr13 107608263 107608979 -12675333 - ORR1D1-int LTR MaLR -601 769 3 1 1405 1550 176 125 62 chr13 107608980 107609118 -12675194 - ORR1D1 LTR MaLR 0 374 210 1 1405 1227 48 0 0 chr13 107609118 107609265 -12675047 - B1_Mus1 SINE Alu 0 148 2 1 1405 1550 176 125 62 chr13 107609265 107609478 -12674834 - ORR1D1 LTR MaLR -165 209 1 1 1405 3243 50 8 2 chr13 107609487 107609885 -12674427 + MTB LTR MaLR 1 400 0 1 1405 228 328 0 0 chr13 107610015 107610082 -12674230 + ID4 SINE ID 4 70 -13 1 1406 497 300 118 41 chr13 107610233 107610639 -12673673 + MLT2B4 LTR ERVL 15 553 -3 1 1406 998 233 5 14 chr13 107611943 107612161 -12672151 - B3 SINE B2 0 216 1 1 1406 494 210 160 8 chr13 107612178 107612303 -12672009 - B1_Mur1 SINE Alu -2 147 4 1 1406 279 265 24 64 chr13 107612554 107612679 -12671633 - Lx8 LINE L1 -2 7471 7352 1 1406 24 0 0 0 chr13 107612680 107612704 -12671608 + AT_rich Low_complexity Low_complexity 1 24 0 1 1406 483 234 28 18 chr13 107612775 107612878 -12671434 + ID_B1 SINE B4 114 218 -6 1 1406 198 0 0 0 chr13 107612878 107612900 -12671412 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1 1406 298 315 20 46 chr13 107613354 107613507 -12670805 + B4A SINE B4 1 149 -143 1 1406 379 286 67 74 chr13 107613676 107614000 -12670312 + L1MD LINE L1 5158 5491 -673 1 1406 326 299 62 0 chr13 107614010 107614107 -12670205 + B4A SINE B4 9 111 -181 1 1406 451 274 142 29 chr13 107614228 107614649 -12669663 + L1ME2 LINE L1 5445 5939 -245 1 1406 614 223 30 8 chr13 107614946 107615077 -12669235 + B1_Mur2 SINE Alu 3 136 -13 1 1406 26 0 0 0 chr13 107615077 107615103 -12669209 + AT_rich Low_complexity Low_complexity 1 26 0 1 1406 542 218 83 0 chr13 107616228 107616361 -12667951 - B1F2 SINE Alu -5 144 1 1 1406 21 0 0 0 chr13 107616365 107616386 -12667926 + AT_rich Low_complexity Low_complexity 1 21 0 1 1406 522 242 65 0 chr13 107616493 107616617 -12667695 + B3A SINE B2 1 132 -66 1 1406 384 291 0 71 chr13 107616748 107616874 -12667438 - RSINE1 SINE B4 -38 127 11 1 1406 391 275 141 0 chr13 107617646 107617788 -12666524 + RSINE1 SINE B4 2 163 -2 1 1406 241 291 11 75 chr13 107618114 107618140 -12666172 - ID_B1 SINE B4 -132 92 6 1 1406 301 239 0 0 chr13 107618140 107618207 -12666105 - ID4_ SINE ID -11 72 6 1 1406 355 292 78 17 chr13 107618241 107618356 -12665956 + MER2 DNA MER2_type 4 125 -220 1 1406 327 286 66 0 chr13 107618430 107618521 -12665791 + MER2 DNA MER2_type 249 345 0 1 1406 682 209 15 7 chr13 107618695 107618830 -12665482 - B1_Mur2 SINE Alu -13 136 1 1 1406 538 226 314 0 chr13 107619107 107619266 -12665046 - B3 SINE B2 -7 209 1 2 1406 602 241 30 0 chr13 107619303 107619436 -12664876 + B1_Mur1 SINE Alu 6 142 -7 2 1406 300 292 121 86 chr13 107619968 107620084 -12664228 - ID_B1 SINE B4 -26 198 79 2 1406 528 30 0 0 chr13 107620620 107620686 -12663626 + (CAGCC)n Simple_repeat Simple_repeat 1 66 0 2 1406 682 178 13 52 chr13 107620754 107620908 -12663404 + B1_Mur3 SINE Alu 2 149 0 2 1406 663 13 0 0 chr13 107621467 107621543 -12662769 + (GTTTG)n Simple_repeat Simple_repeat 2 77 0 2 1406 1147 50 0 0 chr13 107621543 107621682 -12662630 - B1_Mus1 SINE Alu -9 139 1 2 1406 258 264 27 14 chr13 107621972 107622045 -12662267 - B4A SINE B4 -217 75 2 2 1406 222 213 164 0 chr13 107622115 107622176 -12662136 + MER5A DNA MER1_type 1 71 -118 2 1406 390 244 16 1 chr13 107623408 107623502 -12660810 - PB1D9 SINE Alu -24 126 29 2 1406 276 251 34 64 chr13 107626727 107626849 -12657463 - B4A SINE B4 0 292 112 2 1406 723 194 7 36 chr13 107627031 107627170 -12657142 - B1_Mur1 SINE Alu -9 140 6 2 1406 345 326 13 89 chr13 107627170 107627189 -12657123 - B4 SINE B4 -75 217 72 2 1406 23 33 0 0 chr13 107627290 107627320 -12656992 + AT_rich Low_complexity Low_complexity 1 30 0 2 1406 751 297 104 15 chr13 107627448 107627708 -12656604 + B4A SINE B4 1 283 -9 2 1406 218 32 32 0 chr13 107627734 107627765 -12656547 + (GGGA)n Simple_repeat Simple_repeat 1 32 0 2 1406 385 325 43 54 chr13 107627899 107628183 -12656129 + B4 SINE B4 1 276 -16 2 1406 299 98 39 0 chr13 107628183 107628234 -12656078 + (CATA)n Simple_repeat Simple_repeat 4 56 0 2 1406 270 304 21 42 chr13 107628234 107628261 -12656051 + RSINE1 SINE B4 138 161 -4 2 1406 288 278 93 46 chr13 107628810 107628961 -12655351 + RSINE1 SINE B4 2 159 -6 2 1406 24 0 0 0 chr13 107628964 107628988 -12655324 + AT_rich Low_complexity Low_complexity 1 24 0 2 1406 877 134 93 25 chr13 107629672 107629833 -12654479 + B2_Mm2 SINE B2 5 176 -19 2 1406 333 221 0 0 chr13 107630032 107630100 -12654212 + ID4 SINE ID 2 69 -14 2 1406 302 300 33 79 chr13 107630685 107630837 -12653475 + B1F2 SINE Alu 4 148 -1 2 1406 720 206 55 25 chr13 107631923 107632122 -12652190 + B3 SINE B2 2 206 -10 2 1406 691 272 15 5 chr13 107633517 107633726 -12650586 - B3A SINE B2 -3 213 1 2 1406 352 316 36 14 chr13 107633726 107633864 -12650448 + MER119 DNA MER1_type 406 546 -37 2 1406 405 287 85 0 chr13 107633953 107634082 -12650230 + B1F SINE Alu 1 140 -9 2 1406 25 0 0 0 chr13 107634209 107634234 -12650078 + AT_rich Low_complexity Low_complexity 1 25 0 2 1406 230 288 45 0 chr13 107634299 107634365 -12649947 - MER58B DNA MER1_type -5 336 269 2 1406 246 271 109 8 chr13 107634460 107634579 -12649733 - MER58B DNA MER1_type -192 149 19 2 1406 623 236 29 64 chr13 107635414 107635618 -12648694 + B3A SINE B2 2 198 0 2 1406 1127 99 99 0 chr13 107637074 107637246 -12647066 - B2_Mm2 SINE B2 -6 189 1 2 1406 221 349 0 0 chr13 107637801 107637867 -12646445 + B4 SINE B4 1 66 -226 2 1406 263 215 0 25 chr13 107637909 107637990 -12646322 + GA-rich Low_complexity Low_complexity 1 79 0 2 1406 412 274 49 0 chr13 107638842 107638944 -12645368 - PB1D10 SINE Alu -9 108 2 2 1406 1380 74 26 0 chr13 107639503 107639692 -12644620 + B2_Mm2 SINE B2 1 194 -1 2 1406 849 158 14 0 chr13 107640520 107640666 -12643646 + B1_Mur1 SINE Alu 2 149 0 2 1406 1247 80 51 6 chr13 107641517 107641693 -12642619 - B2_Mm2 SINE B2 -10 185 2 2 1406 355 325 51 37 chr13 107641860 107642074 -12642238 + MIR SINE MIR 20 236 -26 2 1406 325 268 69 40 chr13 107643367 107643468 -12640844 - RSINE1 SINE B4 -13 152 49 2 1406 25 31 0 0 chr13 107643502 107643534 -12640778 + AT_rich Low_complexity Low_complexity 1 32 0 2 1406 220 109 21 42 chr13 107643624 107643672 -12640640 + T-rich Low_complexity Low_complexity 2 48 0 2 1406 194 349 83 18 chr13 107643718 107643887 -12640425 - MIR SINE MIR -3 259 80 2 1406 301 306 19 75 chr13 107644288 107644394 -12639918 + RSINE1 SINE B4 59 158 -7 2 1406 299 323 77 6 chr13 107644826 107644982 -12639330 - L2a LINE L2 -55 3371 3205 2 1406 1418 34 79 0 chr13 107645330 107645348 -12638964 - B2_Mm1a SINE B2 0 193 176 2 1406 351 0 0 0 chr13 107645348 107645387 -12638925 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 2 1406 1418 34 79 0 chr13 107645387 107645546 -12638766 - B2_Mm1a SINE B2 -18 175 3 2 1406 790 216 0 0 chr13 107645596 107645744 -12638568 + B1_Mur2 SINE Alu 2 149 0 2 1406 867 159 216 0 chr13 107646380 107646556 -12637756 + B3 SINE B2 1 214 -2 2 1406 32 0 0 0 chr13 107646556 107646588 -12637724 + AT_rich Low_complexity Low_complexity 1 32 0 2 1406 324 203 0 0 chr13 107646617 107646676 -12637636 + MER5A1 DNA MER1_type 99 157 -9 2 1406 21 0 0 0 chr13 107647262 107647283 -12637029 + AT_rich Low_complexity Low_complexity 1 21 0 2 1406 455 198 12 0 chr13 107647702 107647783 -12636529 + PB1D10 SINE Alu 1 82 -35 2 1406 470 275 40 44 chr13 107648800 107649028 -12635284 + B4A SINE B4 2 228 -64 2 1406 402 282 17 94 chr13 107649036 107649216 -12635096 + B3A SINE B2 11 176 -22 2 1406 23 33 0 0 chr13 107649422 107649452 -12634860 + AT_rich Low_complexity Low_complexity 1 30 0 2 1406 1007 83 29 13 chr13 107649591 107649897 -12634415 + (TAGA)n Simple_repeat Simple_repeat 1 311 0 2 1406 2122 108 9 21 chr13 107649963 107650294 -12634018 + ORR1A2 LTR MaLR 1 327 0 2 1406 22 35 0 0 chr13 107650794 107650823 -12633489 + AT_rich Low_complexity Low_complexity 1 29 0 2 1406 618 291 16 108 chr13 107651175 107651491 -12632821 - B4 SINE B4 -3 289 3 2 1406 255 213 0 0 chr13 107651831 107651849 -12632463 + A-rich Low_complexity Low_complexity 1 18 0 2 1406 1389 85 26 0 chr13 107651849 107652038 -12632274 + B2_Mm2 SINE B2 1 194 -1 2 1406 255 213 0 0 chr13 107652038 107652080 -12632232 + A-rich Low_complexity Low_complexity 19 60 0 2 1406 286 74 18 3 chr13 107652081 107652150 -12632162 + B2_Mm1t SINE B2 125 193 0 2 1406 1110 97 102 0 chr13 107652788 107652964 -12631348 + B2_Mm2 SINE B2 2 195 0 2 1406 1593 21 21 0 chr13 107652976 107653165 -12631147 + B2_Mm1t SINE B2 1 193 0 2 1406 348 167 98 87 chr13 107653314 107653406 -12630906 + B3 SINE B2 1 93 -123 2 1406 216 158 0 0 chr13 107653409 107653447 -12630865 + GA-rich Low_complexity Low_complexity 3 40 0 2 1406 262 243 54 0 chr13 107653449 107653523 -12630789 + BC1_Mm scRNA scRNA 6 83 -69 2 1406 306 303 10 29 chr13 107653581 107653683 -12630629 + L2 LINE L2 1437 1536 -1883 2 1406 227 302 84 38 chr13 107654301 107654432 -12629880 + MER58B DNA MER1_type 205 341 0 2 1406 1272 152 18 18 chr13 107654516 107654737 -12629575 + URR1B DNA MER1_type 1 221 -4 2 1406 870 204 63 21 chr13 107655579 107655769 -12628543 - B3 SINE B2 -11 205 8 2 1406 26 0 0 0 chr13 107656142 107656168 -12628144 + AT_rich Low_complexity Low_complexity 1 26 0 2 1406 23 33 0 0 chr13 107656411 107656441 -12627871 + AT_rich Low_complexity Low_complexity 1 30 0 2 1406 249 271 98 0 chr13 107657540 107657662 -12626650 + HAL1 LINE L1 73 206 -2301 2 1406 489 301 51 0 chr13 107657686 107657842 -12626470 + RSINE1 SINE B4 1 164 -1 2 1406 587 266 46 0 chr13 107659408 107659581 -12624731 + B3A SINE B2 2 182 -16 2 1406 186 176 0 0 chr13 107659588 107659639 -12624673 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1406 315 284 50 25 chr13 107659684 107659851 -12624461 + L1MB3 LINE L1 6003 6174 -9 2 1406 908 84 144 46 chr13 107660102 107660276 -12624036 + B2_Mm2 SINE B2 3 193 -2 2 1406 22 88 0 0 chr13 107660961 107661018 -12623294 + AT_rich Low_complexity Low_complexity 1 57 0 2 1406 559 255 68 21 chr13 107661235 107661427 -12622885 + L1MB1 LINE L1 5799 5999 -169 2 1406 2671 89 19 0 chr13 107661570 107661939 -12622373 - Lx LINE L1 -286 6368 5993 2 1406 1250 110 15 5 chr13 107661941 107662142 -12622170 + Lx LINE L1 6447 6649 -5 2 1406 226 311 105 16 chr13 107662376 107662500 -12621812 - Tigger8 DNA MER2_type -95 571 437 2 1406 552 235 46 105 chr13 107662621 107662840 -12621472 + B3 SINE B2 9 214 -2 2 1406 446 54 0 98 chr13 107663291 107663373 -12620939 + L1Md_F2 LINE L1 6501 6574 -8 2 1406 521 301 15 29 chr13 107663720 107663857 -12620455 + ID_B1 SINE B4 84 218 -6 2 1406 327 113 0 0 chr13 107664324 107664377 -12619935 + (TG)n Simple_repeat Simple_repeat 1 53 0 2 1406 1484 53 16 5 chr13 107664428 107664619 -12619693 + B2_Mm2 SINE B2 3 195 0 2 1406 1188 41 0 0 chr13 107664629 107664774 -12619538 + B1_Mus2 SINE Alu 2 146 -1 2 1406 236 250 95 48 chr13 107664797 107664881 -12619431 + RSINE1 SINE B4 2 89 -76 2 1406 24 0 0 0 chr13 107665254 107665278 -12619034 + AT_rich Low_complexity Low_complexity 1 24 0 2 1406 340 223 122 37 chr13 107665292 107665399 -12618913 - PB1D10 SINE Alu -1 116 1 2 1406 324 0 0 0 chr13 107666172 107666208 -12618104 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1406 22 70 0 0 chr13 107666393 107666436 -12617876 + AT_rich Low_complexity Low_complexity 1 43 0 2 1406 337 316 14 54 chr13 107666512 107666659 -12617653 + ID_B1 SINE B4 79 219 -5 2 1406 517 237 94 59 chr13 107666742 107666944 -12617368 + B3 SINE B2 2 210 -6 2 1406 24 32 0 0 chr13 107666953 107666984 -12617328 + AT_rich Low_complexity Low_complexity 1 31 0 2 1406 463 262 49 155 chr13 107667442 107667668 -12616644 - RMER12 LTR ERVK 0 1322 1121 2 1406 1468 84 11 5 chr13 107667737 107667928 -12616384 - B2_Mm1t SINE B2 0 193 2 2 1406 4200 190 122 34 chr13 107667952 107668353 -12615959 - RMER12 LTR ERVK -85 1237 769 3 1406 1008 154 0 0 chr13 107668353 107668528 -12615784 + (TGGA)n Simple_repeat Simple_repeat 1 175 0 3 1406 4200 190 122 34 chr13 107668528 107669262 -12615050 - RMER12 LTR ERVK -554 768 2 3 1406 311 269 39 0 chr13 107671772 107671850 -12612462 - PB1D9 SINE Alu -11 109 29 3 1406 270 73 0 0 chr13 107672017 107672058 -12612254 + (CA)n Simple_repeat Simple_repeat 1 41 0 3 1406 22 56 0 0 chr13 107672083 107672119 -12612193 + AT_rich Low_complexity Low_complexity 1 36 0 3 1406 505 201 133 57 chr13 107672151 107672309 -12612003 - B3A SINE B2 -28 170 1 3 1406 207 0 0 0 chr13 107673672 107673695 -12610617 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 3 1406 330 225 290 0 chr13 107673786 107673988 -12610324 - L1MA6 LINE L1 -145 6155 5896 3 1406 328 238 39 19 chr13 107674039 107674142 -12610170 - L1MA7 LINE L1 -22 6269 6165 3 1406 916 223 94 28 chr13 107674409 107674717 -12609595 - MTD LTR MaLR 0 419 1 3 1406 1616 72 0 0 chr13 107674791 107674984 -12609328 + B2_Mm1t SINE B2 1 193 0 3 1406 686 287 152 79 chr13 107675146 107675792 -12608520 + RMER13A LTR ERVK 42 734 -126 3 1406 24 0 0 0 chr13 107676130 107676154 -12608158 + AT_rich Low_complexity Low_complexity 1 24 0 3 1406 675 87 0 0 chr13 107676981 107677085 -12607227 + (CTGGGG)n Simple_repeat Simple_repeat 5 108 0 3 1406 747 259 86 0 chr13 107677460 107677657 -12606655 - B3 SINE B2 0 216 3 3 1406 664 224 161 38 chr13 107677687 107677873 -12606439 + B3 SINE B2 2 210 -6 3 1406 679 209 135 6 chr13 107677979 107678157 -12606155 + B3 SINE B2 2 202 -14 3 1406 754 221 0 21 chr13 107678303 107678446 -12605866 + B1_Mur4 SINE Alu 1 140 -10 3 1406 527 200 35 9 chr13 107678455 107678571 -12605741 + B1_Mur1 SINE Alu 31 149 0 3 1406 459 262 0 28 chr13 107678607 107678713 -12605599 + B1_Mus1 SINE Alu 1 103 -45 3 1406 934 171 27 0 chr13 107678991 107679137 -12605175 + B1_Mur4 SINE Alu 1 150 0 3 1406 451 286 28 35 chr13 107680414 107680559 -12603753 - B4A SINE B4 -147 145 2 3 1406 323 292 10 10 chr13 107680710 107680807 -12603505 + RSINE1 SINE B4 1 97 -68 3 1406 25 0 0 0 chr13 107680841 107680866 -12603446 + AT_rich Low_complexity Low_complexity 1 25 0 3 1406 289 226 0 0 chr13 107680877 107680930 -12603382 + tRNA-Ala-GCA tRNA tRNA 17 69 -6 3 1406 201 154 0 0 chr13 107681046 107681085 -12603227 + T-rich Low_complexity Low_complexity 1 39 0 3 1406 772 215 7 14 chr13 107681092 107681238 -12603074 - B1_Mus2 SINE Alu 0 147 3 3 1406 305 292 55 109 chr13 107681406 107681426 -12602886 + ID_B1 SINE B4 75 151 -141 3 1406 611 156 34 0 chr13 107681426 107681553 -12602759 + B1_Mur2 SINE Alu 1 142 -7 3 1406 305 292 55 109 chr13 107681553 107681571 -12602741 + ID_B1 SINE B4 152 232 -60 3 1406 551 219 276 7 chr13 107682898 107683071 -12601241 - B3 SINE B2 -6 210 9 3 1406 38 39 0 0 chr13 107683135 107683187 -12601125 + AT_rich Low_complexity Low_complexity 1 52 0 3 1406 366 292 54 42 chr13 107683241 107683409 -12600903 + L1MC5 LINE L1 7056 7225 -736 3 1406 272 197 23 126 chr13 107683569 107683656 -12600656 + L1MC5 LINE L1 7314 7391 -570 3 1406 320 287 228 0 chr13 107683669 107683770 -12600542 + RSINE1 SINE B4 16 139 -26 3 1406 424 310 0 8 chr13 107683880 107683997 -12600315 + ID_B1 SINE B4 94 209 -15 3 1406 268 207 135 94 chr13 107684100 107684196 -12600116 + B1_Mur2 SINE Alu 45 144 -5 3 1406 726 156 51 62 chr13 107684461 107684639 -12599673 + B2_Mm2 SINE B2 10 185 -10 3 1406 266 283 72 40 chr13 107684724 107684849 -12599463 - L1MC5 LINE L1 -743 7218 7090 3 1406 801 157 35 28 chr13 107684965 107685109 -12599203 + B1_Mur2 SINE Alu 2 146 -3 3 1406 405 0 0 0 chr13 107686640 107686685 -12597627 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1406 299 350 97 0 chr13 107687572 107687675 -12596637 - PB1 SINE Alu -2 125 13 3 1406 1329 209 155 15 chr13 107687942 107688277 -12596035 + ORR1C2 LTR MaLR 3 384 0 3 1406 843 214 38 6 chr13 107688335 107688518 -12595794 + ORR1D1 LTR MaLR 3 191 -183 3 1406 288 298 152 0 chr13 107689490 107689661 -12594651 + MIRb SINE MIR 26 222 -46 3 1406 442 276 9 37 chr13 107689881 107690011 -12594301 + B1_Mur1 SINE Alu 2 126 -21 3 1406 907 148 66 71 chr13 107691144 107691326 -12592986 + B2_Mm2 SINE B2 15 195 0 3 1406 1267 54 0 0 chr13 107691351 107691498 -12592814 + B1_Mus1 SINE Alu 2 148 0 3 1406 222 91 0 0 chr13 107691498 107691531 -12592781 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1406 34 0 0 0 chr13 107693395 107693429 -12590883 + AT_rich Low_complexity Low_complexity 1 34 0 3 1406 279 0 0 0 chr13 107694129 107694160 -12590152 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 3 1406 736 229 8 8 chr13 107694183 107694358 -12589954 - RMER1A Other Other -848 182 35 3 1406 465 254 135 23 chr13 107694590 107694723 -12589589 - B1F2 SINE Alu -1 148 1 3 1406 285 272 0 58 chr13 107694779 107694865 -12589447 - ID4_ SINE ID 0 83 3 3 1406 1301 108 17 0 chr13 107695272 107695448 -12588864 + B2_Mm1t SINE B2 1 179 -14 3 1406 352 115 316 18 chr13 107695495 107695609 -12588703 + B2_Mm2 SINE B2 47 194 -1 3 1406 398 305 66 0 chr13 107695634 107695785 -12588527 + B4 SINE B4 63 223 -69 3 1406 584 206 33 0 chr13 107695661 107695794 -12588518 + B1_Mur1 SINE Alu 5 148 0 3 1406 983 219 25 15 chr13 107695806 107696010 -12588302 + B3 SINE B2 11 216 0 3 1406 1757 237 41 112 chr13 107696061 107696765 -12587547 - RMER1A Other Other -210 820 167 3 1406 2022 103 40 18 chr13 107696766 107697092 -12587220 + IAPEY_LTR LTR ERVK 53 385 0 3 1406 1625 257 22 34 chr13 107697102 107697608 -12586704 - RMER1B Other Other -582 484 1 3 1406 189 107 0 0 chr13 107697741 107697769 -12586543 + (ATTTG)n Simple_repeat Simple_repeat 2 29 0 3 1406 248 252 23 183 chr13 107697981 107698112 -12586200 + PB1D10 SINE Alu 1 110 -7 3 1406 231 250 31 0 chr13 107698113 107698177 -12586135 + GA-rich Low_complexity Low_complexity 1 66 0 3 1406 212 305 72 12 chr13 107698314 107698397 -12585915 - PB1 SINE Alu -24 103 16 3 1406 609 239 85 0 chr13 107699275 107699405 -12584907 + ID_B1 SINE B4 82 222 -2 3 1406 787 174 234 0 chr13 107699415 107699582 -12584730 + B3 SINE B2 1 206 -10 3 1406 756 0 0 0 chr13 107699594 107699678 -12584634 + (GAAA)n Simple_repeat Simple_repeat 3 86 0 3 1406 340 231 134 140 chr13 107699777 107699948 -12584364 + MTEa LTR MaLR 201 379 0 3 1406 204 40 0 0 chr13 107700485 107700510 -12583802 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 1406 183 129 0 0 chr13 107700705 107700736 -12583576 + (T)n Simple_repeat Simple_repeat 1 31 0 3 1406 701 267 55 35 chr13 107701261 107701463 -12582849 + B3 SINE B2 10 215 -1 3 1406 220 235 0 38 chr13 107701558 107701611 -12582701 + (CACG)n Simple_repeat Simple_repeat 4 54 0 3 1406 383 327 35 43 chr13 107701662 107701777 -12582535 + B1_Mur1 SINE Alu 2 115 -34 3 1406 310 274 47 23 chr13 107701985 107702071 -12582241 - B1_Mus1 SINE Alu -60 88 1 3 1406 28 48 0 0 chr13 107702071 107702113 -12582199 + AT_rich Low_complexity Low_complexity 1 42 0 3 1406 414 39 0 0 chr13 107702174 107702226 -12582086 + (CA)n Simple_repeat Simple_repeat 2 53 0 3 1406 466 314 12 43 chr13 107702232 107702395 -12581917 + RSINE1 SINE B4 3 160 -5 3 1406 1248 74 0 0 chr13 107702460 107702608 -12581704 + B1_Mus1 SINE Alu 1 148 0 3 1406 381 266 61 37 chr13 107702635 107702799 -12581513 + MLT1C LTR MaLR 1 168 -299 3 1406 433 261 68 17 chr13 107702812 107702929 -12581383 - B1F SINE Alu -1 148 26 3 1406 3333 130 9 11 chr13 107702937 107703466 -12580846 - RLTR1D LTR ERV1 -16 589 62 3 1406 225 340 115 71 chr13 107703529 107703824 -12580488 + MLT1C LTR MaLR 158 465 -2 3 1406 254 300 12 0 chr13 107704512 107704592 -12579720 + PB1D10 SINE Alu 36 116 -1 3 1406 481 277 45 30 chr13 107704613 107704747 -12579565 + RSINE1 SINE B4 30 165 0 3 1406 210 118 0 0 chr13 107704756 107704790 -12579522 + (CAGA)n Simple_repeat Simple_repeat 3 36 0 3 1406 268 231 28 149 chr13 107705116 107705223 -12579089 + PB1D10 SINE Alu 24 117 0 3 1406 641 230 104 0 chr13 107705226 107705361 -12578951 + B1_Mur2 SINE Alu 1 149 0 3 1406 206 178 22 0 chr13 107705365 107705410 -12578902 + A-rich Low_complexity Low_complexity 2 47 0 3 1406 809 236 50 31 chr13 107705577 107705804 -12578508 + B3A SINE B2 5 212 -4 3 1406 363 281 0 9 chr13 107705889 107706004 -12578308 + L1M4 LINE L1 2291 2404 -3742 3 1406 40 37 0 0 chr13 107706273 107706327 -12577985 + AT_rich Low_complexity Low_complexity 1 54 0 3 1406 637 60 0 0 chr13 107706347 107706430 -12577882 + B1_Mus2 SINE Alu 65 147 0 3 1406 452 210 18 83 chr13 107706575 107706684 -12577628 + MT2B LTR ERVL 156 257 -344 3 1406 1067 65 0 0 chr13 107706590 107706729 -12577583 + B1_Mus2 SINE Alu 9 147 0 3 1406 180 0 0 0 chr13 107706729 107706749 -12577563 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1406 701 200 31 0 chr13 107706761 107706891 -12577421 - B1F SINE Alu -11 138 5 3 1406 1391 82 50 0 chr13 107707198 107707380 -12576932 - B2_Mm2 SINE B2 -3 192 2 3 1406 180 0 0 0 chr13 107707568 107707588 -12576724 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1406 1541 49 49 0 chr13 107707600 107707785 -12576527 + B2_Mm2 SINE B2 2 195 0 3 1406 200 59 0 29 chr13 107707785 107707820 -12576492 + (CAAAAA)n Simple_repeat Simple_repeat 1 34 0 3 1406 186 43 0 0 chr13 107707910 107707933 -12576379 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1406 632 247 13 33 chr13 107708587 107708738 -12575574 + B1F2 SINE Alu 1 148 -1 4 1406 236 303 40 0 chr13 107709429 107709505 -12574807 - U6 snRNA snRNA -13 94 16 4 1406 507 240 338 20 chr13 107709837 107710041 -12574271 - B4 SINE B4 -2 290 22 4 1406 236 274 97 0 chr13 107709988 107710050 -12574262 - ID2 SINE ID -10 73 6 4 1406 708 256 105 25 chr13 107710059 107710259 -12574053 - ID_B1 SINE B4 -7 217 2 4 1406 22 0 0 0 chr13 107710261 107710283 -12574029 + AT_rich Low_complexity Low_complexity 1 22 0 4 1406 240 226 65 97 chr13 107710379 107710472 -12573840 + PB1D10 SINE Alu 23 112 -8 4 1406 949 274 67 19 chr13 107710637 107710905 -12573407 + MTE2b LTR MaLR 97 377 -2 4 1406 809 221 85 10 chr13 107710964 107711165 -12573147 + B3 SINE B2 1 216 0 4 1406 1351 7 7 0 chr13 107711165 107711310 -12573002 + B1_Mus2 SINE Alu 1 147 0 4 1406 284 94 19 0 chr13 107711310 107711363 -12572949 + (CAAAAA)n Simple_repeat Simple_repeat 6 59 0 4 1406 326 306 83 0 chr13 107711414 107711522 -12572790 - Tigger6a DNA MER2_type -5 1078 962 4 1406 899 252 38 47 chr13 107711533 107711745 -12572567 + B3 SINE B2 1 210 -6 4 1406 525 301 16 0 chr13 107711769 107711892 -12572420 + B1_Mur1 SINE Alu 4 128 -21 4 1406 409 159 85 64 chr13 107712460 107712554 -12571758 - B1F2 SINE Alu -49 100 5 4 1406 215 360 89 10 chr13 107712571 107712672 -12571640 + B1F SINE Alu 28 136 -13 4 1406 687 308 16 0 chr13 107712683 107712865 -12571447 + ID_B1 SINE B4 6 190 -34 4 1406 1767 26 0 0 chr13 107712881 107713071 -12571241 + B2_Mm1t SINE B2 2 191 -2 4 1406 473 104 13 0 chr13 107713085 107713162 -12571150 + (TATG)n Simple_repeat Simple_repeat 1 78 0 4 1406 955 107 13 0 chr13 107713197 107713346 -12570966 + URR1A DNA MER1_type 76 226 0 4 1406 325 309 19 9 chr13 107713416 107713524 -12570788 + PB1D10 SINE Alu 2 110 -7 4 1406 1455 71 16 21 chr13 107713745 107713933 -12570379 + B2_Mm2 SINE B2 2 188 -7 4 1406 737 243 0 0 chr13 107713977 107714125 -12570187 + B1_Mur1 SINE Alu 2 149 0 4 1406 212 171 0 0 chr13 107714225 107714266 -12570046 + A-rich Low_complexity Low_complexity 1 41 0 4 1406 944 168 0 45 chr13 107714552 107714708 -12569604 + B1_Mur4 SINE Alu 2 150 0 4 1406 824 83 0 0 chr13 107714893 107715002 -12569310 + B1_Mus1 SINE Alu 2 110 -38 4 1406 235 221 191 9 chr13 107714913 107715018 -12569294 - YREP_Mm Unknown Unknown -1516 296 173 4 1406 219 36 0 0 chr13 107715025 107715053 -12569259 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4 1406 4299 82 284 115 chr13 107715705 107716546 -12567766 + RLTR13C1 LTR ERVK 1 983 0 4 1406 582 321 59 4 chr13 107716560 107716798 -12567514 + MLT1A0 LTR MaLR 11 261 -104 4 1406 254 241 0 0 chr13 107716795 107716849 -12567463 + B1F SINE Alu 95 148 -1 4 1406 301 265 217 43 chr13 107716850 107716988 -12567324 + RSINE1 SINE B4 1 162 -3 4 1406 418 212 252 17 chr13 107717230 107717345 -12566967 - B1_Mur2 SINE Alu 0 149 8 4 1406 322 220 0 0 chr13 107717380 107717439 -12566873 + PB1 SINE Alu 59 117 -10 4 1406 228 281 47 0 chr13 107717452 107717516 -12566796 + ID4 SINE ID 3 69 -14 4 1406 586 98 122 8 chr13 107717516 107717639 -12566673 + Lx9 LINE L1 7508 7644 0 4 1406 1231 69 0 0 chr13 107717648 107717793 -12566519 + B1_Mm SINE Alu 2 146 -1 4 1406 189 0 0 0 chr13 107717793 107717814 -12566498 + (TAA)n Simple_repeat Simple_repeat 2 22 0 4 1406 550 310 5 90 chr13 107717859 107717990 -12566322 + B3A SINE B2 1 117 -81 4 1406 288 0 0 0 chr13 107717990 107718022 -12566290 + (CAGA)n Simple_repeat Simple_repeat 1 32 0 4 1406 550 310 5 90 chr13 107718022 107718078 -12566234 + B3A SINE B2 118 172 -26 4 1406 744 164 8 45 chr13 107718172 107718306 -12566006 - B1_Mur2 SINE Alu -1 148 20 4 1406 474 252 10 29 chr13 107718334 107718436 -12565876 + PB1D10 SINE Alu 2 101 -16 4 1406 1462 66 22 11 chr13 107718783 107718966 -12565346 + B2_Mm2 SINE B2 2 186 -9 4 1406 504 224 93 14 chr13 107719029 107719195 -12565117 - MTD LTR MaLR -238 181 1 4 1406 290 314 47 39 chr13 107719597 107719726 -12564586 + B1_Mur1 SINE Alu 18 147 -2 4 1406 364 291 32 21 chr13 107720178 107720331 -12563981 + MLT1A0 LTR MaLR 222 370 -38 4 1406 2784 234 27 13 chr13 107720482 107720926 -12563386 + Lx7 LINE L1 6566 7019 -677 4 1406 1609 67 0 5 chr13 107720926 107721121 -12563191 + B2_Mm2 SINE B2 2 195 0 4 1406 2784 234 27 13 chr13 107721121 107721311 -12563001 + Lx7 LINE L1 7020 7209 -487 4 1406 242 237 21 43 chr13 107721398 107721539 -12562773 + T-rich Low_complexity Low_complexity 3 140 0 4 1406 1168 215 29 0 chr13 107721678 107721887 -12562425 + B3 SINE B2 2 216 0 4 1406 1235 43 0 0 chr13 107721917 107722056 -12562256 + B1_Mus1 SINE Alu 3 141 -7 4 1406 257 0 30 0 chr13 107722060 107722093 -12562219 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1406 620 147 65 22 chr13 107722110 107722249 -12562063 + B2_Mm2 SINE B2 51 195 0 4 1406 268 234 0 0 chr13 107722545 107722609 -12561703 - MER5A1 DNA MER1_type -1 165 102 4 1406 1669 247 117 35 chr13 107722682 107723358 -12560954 + Lx8 LINE L1 6384 7114 -359 4 1406 449 315 91 62 chr13 107723378 107723588 -12560724 + B4A SINE B4 12 227 -65 4 1406 459 52 0 0 chr13 107723627 107723685 -12560627 + (CA)n Simple_repeat Simple_repeat 2 59 0 4 1406 603 0 0 0 chr13 107723723 107723790 -12560522 + (GGAAA)n Simple_repeat Simple_repeat 1 67 0 4 1406 248 267 0 0 chr13 107723878 107723938 -12560374 + RMER15 LTR ERVL 403 462 -113 4 1406 247 167 24 0 chr13 107724529 107724571 -12559741 + ID4_ SINE ID 39 81 -2 4 1406 1409 50 11 11 chr13 107724598 107724779 -12559533 + B2_Mm2 SINE B2 1 181 -14 4 1406 297 288 197 33 chr13 107724816 107724938 -12559374 + B1_Mur2 SINE Alu 1 142 -7 4 1406 467 249 91 30 chr13 107725023 107725197 -12559115 + B3A SINE B2 2 183 -12 4 1406 1157 41 14 0 chr13 107725197 107725342 -12558970 + B1_Mus2 SINE Alu 1 147 0 4 1406 283 260 134 96 chr13 107725342 107725354 -12558958 + B2_Mm2 SINE B2 184 195 0 4 1406 209 186 0 0 chr13 107725379 107725422 -12558890 + A-rich Low_complexity Low_complexity 3 45 0 4 1406 270 0 0 0 chr13 107726168 107726198 -12558114 + (A)n Simple_repeat Simple_repeat 1 30 0 4 1406 1227 35 0 0 chr13 107727457 107727602 -12556710 - B1_Mm SINE Alu -2 145 1 4 1406 322 193 239 0 chr13 107727620 107727708 -12556604 - ID_B1 SINE B4 -16 208 100 4 1406 782 200 0 24 chr13 107727722 107727886 -12556426 + RLTR20A1 LTR ERVK 392 551 0 4 1406 1174 75 0 0 chr13 107728107 107728253 -12556059 + B1_Mus2 SINE Alu 2 147 0 4 1406 269 265 0 14 chr13 107728566 107728635 -12555677 - ID4_ SINE ID -11 72 5 4 1406 1121 78 0 0 chr13 107728733 107728875 -12555437 + B1_Mus2 SINE Alu 1 142 -5 4 1406 408 40 0 0 chr13 107728875 107728925 -12555387 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 4 1406 947 203 61 5 chr13 107728933 107729131 -12555181 + B3 SINE B2 1 209 -7 4 1406 489 302 23 0 chr13 107729224 107729353 -12554959 + B1F SINE Alu 1 132 -17 4 1406 430 285 16 0 chr13 107729405 107729528 -12554784 + ID_B1 SINE B4 100 224 0 4 1406 450 230 78 26 chr13 107729562 107729678 -12554634 + B1F1 SINE Alu 27 148 -1 4 1406 1232 91 21 36 chr13 107729687 107729881 -12554431 - B2_Mm2 SINE B2 -3 192 2 4 1406 366 80 0 0 chr13 107729938 107729988 -12554324 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1406 369 0 0 0 chr13 107729988 107730028 -12554284 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1406 360 269 0 0 chr13 107730046 107730113 -12554199 + ID4 SINE ID 15 81 -2 4 1406 253 306 14 0 chr13 107730171 107730243 -12554069 + MLT2B3 LTR ERVL 22 94 -460 4 1406 364 324 63 129 chr13 107730291 107730578 -12553734 + ORR1E LTR MaLR 92 359 0 4 1406 24 32 0 0 chr13 107730657 107730688 -12553624 + AT_rich Low_complexity Low_complexity 1 31 0 4 1406 435 266 165 25 chr13 107730742 107730900 -12553412 + B3A SINE B2 4 183 -15 4 1406 360 0 0 0 chr13 107730911 107730951 -12553361 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1406 681 191 27 0 chr13 107730971 107731081 -12553231 + PB1D9 SINE Alu 8 120 0 4 1406 326 196 18 0 chr13 107731298 107731354 -12552958 - ID4 SINE ID -6 77 21 4 1406 242 250 47 0 chr13 107731301 107731365 -12552947 - tRNA-Ala-GCA tRNA tRNA -7 68 2 4 1406 940 146 21 63 chr13 107731395 107731585 -12552727 - B2_Mm2 SINE B2 -12 183 2 4 1406 2318 208 62 64 chr13 107731726 107732200 -12552112 + RLTR20D LTR ERVK 9 481 -87 4 1406 378 0 0 0 chr13 107732200 107732242 -12552070 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1406 2318 208 62 64 chr13 107732242 107732328 -12551984 + RLTR20D LTR ERVK 482 568 0 4 1406 1294 97 27 0 chr13 107732958 107733143 -12551169 + B2_Mm2 SINE B2 2 191 -4 4 1406 318 208 0 115 chr13 107733316 107733403 -12550909 + RLTR20D LTR ERVK 489 565 -3 4 1406 297 0 0 0 chr13 107733533 107733566 -12550746 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1406 207 0 0 0 chr13 107733599 107733622 -12550690 + (TG)n Simple_repeat Simple_repeat 2 24 0 4 1406 21 24 0 47 chr13 107733728 107733750 -12550562 + AT_rich Low_complexity Low_complexity 1 21 0 4 1406 711 11 0 0 chr13 107733750 107733840 -12550472 - L1Md_T LINE L1 0 6582 6493 4 1406 21 24 0 47 chr13 107733840 107733860 -12550452 + AT_rich Low_complexity Low_complexity 1 20 0 4 1406 328 298 99 33 chr13 107734173 107734385 -12549927 + RLTR12B LTR ERVK 1 226 -302 4 1406 576 122 11 8 chr13 107734700 107734791 -12549521 - RLTR16 LTR ERVK 0 568 418 4 1406 324 0 0 0 chr13 107734791 107734827 -12549485 + (CA)n Simple_repeat Simple_repeat 2 37 0 4 1406 1098 69 7 7 chr13 107734829 107734975 -12549337 + B1_Mm SINE Alu 2 147 0 5 1406 454 281 10 171 chr13 107734975 107735073 -12549239 - RLTR16 LTR ERVK -87 481 407 4 1406 529 264 105 36 chr13 107735059 107735301 -12549011 - RLTR16 LTR ERVK -283 285 59 4 1406 315 0 0 0 chr13 107735827 107735862 -12548450 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1406 360 235 32 65 chr13 107735935 107736058 -12548254 + RLTR14 LTR ERV1 264 382 0 5 1406 189 0 0 0 chr13 107736155 107736176 -12548136 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1406 1180 41 7 7 chr13 107736176 107736324 -12547988 + B1_Mus1 SINE Alu 1 148 0 5 1406 215 174 162 68 chr13 107737816 107737890 -12546422 + B1F SINE Alu 18 98 -51 5 1406 321 282 13 0 chr13 107738004 107738082 -12546230 - ID_B1 SINE B4 -2 222 144 5 1406 599 320 34 24 chr13 107740126 107740334 -12543978 + ID_B1 SINE B4 13 222 -2 5 1406 219 281 15 15 chr13 107740623 107740688 -12543624 - RSINE1 SINE B4 -4 161 97 5 1406 337 284 0 0 chr13 107740829 107740903 -12543409 + PB1D10 SINE Alu 36 109 -8 5 1406 296 230 26 26 chr13 107740915 107740991 -12543321 + ID4 SINE ID 2 77 -6 5 175 1642 36 0 0 chr13 107741055 107741247 -12543065 + B2_Mm1a SINE B2 2 193 0 5 1407 852 222 62 5 chr13 107741631 107741826 -12542486 + B3 SINE B2 11 216 0 5 1407 354 268 140 30 chr13 107742091 107742191 -12542121 - PB1D10 SINE Alu -5 112 2 5 1407 414 282 0 8 chr13 107742230 107742348 -12541964 + PB1D9 SINE Alu 2 118 -2 5 1407 307 259 216 0 chr13 107742992 107743108 -12541204 - ID_B1 SINE B4 0 224 84 5 1407 1104 49 35 0 chr13 107743147 107743289 -12541023 + B1_Mus2 SINE Alu 1 147 0 5 1407 369 338 26 52 chr13 107743845 107743998 -12540314 - RSINE1 SINE B4 -6 159 11 5 1407 1261 84 39 0 chr13 107744004 107744183 -12540129 - B2_Mm1t SINE B2 -6 187 2 5 1407 217 387 0 62 chr13 107744336 107744416 -12539896 - ID4_ SINE ID -7 76 2 5 1407 305 259 0 58 chr13 107744435 107744521 -12539791 - PB1D10 SINE Alu -35 82 2 5 1407 227 262 61 104 chr13 107744521 107744550 -12539762 - B4 SINE B4 -118 174 65 5 1407 458 297 34 0 chr13 107744557 107744675 -12539637 - RSINE1 SINE B4 -32 133 12 5 1407 563 162 114 0 chr13 107744852 107744957 -12539355 - B1_Mus2 SINE Alu -1 146 30 5 1407 723 43 267 0 chr13 107745548 107745664 -12538648 - B1_Mus1 SINE Alu 0 148 2 5 1407 1537 146 91 140 chr13 107745669 107746075 -12538237 - ORR1B1 LTR MaLR -8 386 1 5 1407 230 182 0 0 chr13 107746157 107746190 -12538122 - PB1D9 SINE Alu -77 43 11 5 1407 413 141 26 21 chr13 107746393 107746490 -12537822 - B1_Mur3 SINE Alu -1 148 21 5 1407 321 292 109 33 chr13 107746691 107746783 -12537529 - PB1D7 SINE Alu -20 100 2 5 1407 229 312 72 72 chr13 107746711 107746794 -12537518 - ID_B1 SINE B4 -70 154 72 5 1407 1251 158 18 9 chr13 107747419 107747642 -12536670 - URR1B DNA MER1_type 0 225 1 5 1407 21 36 0 0 chr13 107748870 107748898 -12535414 + AT_rich Low_complexity Low_complexity 1 28 0 5 1407 214 125 42 0 chr13 107748932 107748980 -12535332 + (TA)n Simple_repeat Simple_repeat 1 50 0 5 1407 25 0 0 0 chr13 107749009 107749034 -12535278 + AT_rich Low_complexity Low_complexity 1 25 0 5 1407 240 236 116 63 chr13 107749456 107749551 -12534761 - PB1D10 SINE Alu -1 116 17 5 1407 21 0 0 0 chr13 107749706 107749727 -12534585 + AT_rich Low_complexity Low_complexity 1 21 0 5 1407 607 226 7 57 chr13 107750358 107750499 -12533813 - B1_Mm SINE Alu -12 135 2 5 1407 360 325 84 42 chr13 107752817 107752984 -12531328 + MER20 DNA MER1_type 2 175 -44 5 1407 1148 88 0 0 chr13 107753160 107753307 -12531005 + B1_Mus1 SINE Alu 2 148 0 5 1407 1378 225 102 85 chr13 107753565 107754036 -12530276 - RMER5 LTR ERV1 -47 487 9 5 1407 239 210 125 31 chr13 107754734 107754798 -12529514 - ID4_ SINE ID -12 71 2 5 1407 520 206 11 11 chr13 107754832 107754944 -12529368 - PB1D9 SINE Alu -1 119 3 5 1407 221 290 88 61 chr13 107755701 107755757 -12528555 - PB1D7 SINE Alu -1 119 62 5 1407 243 0 0 0 chr13 107755757 107755784 -12528528 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 1407 221 290 88 61 chr13 107755784 107755841 -12528471 - PB1D7 SINE Alu -59 61 3 5 1407 267 341 11 21 chr13 107756032 107756125 -12528187 - PB1 SINE Alu -11 116 25 5 1407 364 284 46 56 chr13 107756137 107756245 -12528067 - B1F1 SINE Alu -31 118 12 5 1407 830 201 82 0 chr13 107757079 107757273 -12527039 + B3 SINE B2 1 210 -6 5 1407 1577 42 0 10 chr13 107757551 107757745 -12526567 - B2_Mm1a SINE B2 0 193 2 5 1407 1394 40 6 0 chr13 107757835 107758011 -12526301 + MTA_Mm LTR MaLR 1 177 -219 5 1407 1569 32 16 0 chr13 107758053 107758238 -12526074 - B2_Mm1a SINE B2 -4 189 2 5 1407 549 226 51 29 chr13 107759255 107759392 -12524920 - B1_Mur2 SINE Alu -9 140 1 5 1407 526 296 118 29 chr13 107760284 107760585 -12523727 - B4A SINE B4 0 292 2 5 1407 496 125 36 0 chr13 107761263 107761375 -12522937 + (TATG)n Simple_repeat Simple_repeat 4 119 0 5 1407 186 71 0 0 chr13 107761379 107761407 -12522905 + (TCTG)n Simple_repeat Simple_repeat 2 29 0 5 1407 299 302 21 10 chr13 107761708 107761805 -12522507 - ID_B1 SINE B4 -42 182 85 5 1407 249 324 27 0 chr13 107762088 107762162 -12522150 + ID4 SINE ID 4 79 -4 5 1407 329 318 28 18 chr13 107762194 107762303 -12522009 + ID_B1 SINE B4 87 196 -28 5 1407 995 38 75 0 chr13 107762724 107762857 -12521455 - B1_Mm SINE Alu 0 147 5 5 1407 25 31 0 0 chr13 107763086 107763118 -12521194 + AT_rich Low_complexity Low_complexity 1 32 0 5 1407 245 206 265 21 chr13 107763264 107763358 -12520954 - B1_Mur4 SINE Alu -38 111 1 5 1407 373 145 0 0 chr13 107763388 107763450 -12520862 - B1_Mus1 SINE Alu -85 63 2 5 1407 315 156 0 59 chr13 107763391 107763459 -12520853 - B4A SINE B4 -148 144 81 5 1407 21 71 0 0 chr13 107763479 107763521 -12520791 + AT_rich Low_complexity Low_complexity 1 42 0 5 1407 51 17 0 0 chr13 107764089 107764147 -12520165 + AT_rich Low_complexity Low_complexity 1 58 0 5 1407 224 30 30 0 chr13 107765639 107765672 -12518640 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1407 1168 37 0 0 chr13 107765672 107765808 -12518504 - B1_Mus2 SINE Alu -10 137 2 5 1407 186 143 0 0 chr13 107766034 107766069 -12518243 + (T)n Simple_repeat Simple_repeat 1 35 0 5 1407 1200 54 0 0 chr13 107766069 107766216 -12518096 - B1_Mm SINE Alu 0 147 1 5 1407 482 173 10 0 chr13 107767433 107767537 -12516775 + (TA)n Simple_repeat Simple_repeat 1 105 0 5 1407 186 71 0 0 chr13 107767558 107767586 -12516726 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 5 1407 1104 96 13 6 chr13 107767587 107767744 -12516568 - B2_Mm2 SINE B2 -37 158 1 5 1407 409 257 205 5 chr13 107767784 107768020 -12516292 + B4 SINE B4 1 282 -10 5 1407 218 255 0 0 chr13 107768030 107768081 -12516231 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1407 707 275 35 10 chr13 107768378 107768580 -12515732 + ID_B1 SINE B4 10 216 -8 5 1407 307 272 80 80 chr13 107768662 107768850 -12515462 + YREP_Mm Unknown Unknown 120 307 -1505 5 1407 663 239 14 0 chr13 107768717 107768855 -12515457 - ID_B1 SINE B4 0 224 85 5 1407 1142 266 3 17 chr13 107769179 107769470 -12514842 + B4 SINE B4 1 287 -5 5 1407 2101 252 142 19 chr13 107769786 107770490 -12513822 - MMAR1 DNA Mariner -11 1275 485 5 1407 1066 70 35 7 chr13 107770588 107770732 -12513580 - B1_Mus1 SINE Alu 0 148 1 5 1407 1079 68 0 20 chr13 107770760 107770910 -12513402 + B1_Mus2 SINE Alu 1 147 0 5 1407 465 330 39 10 chr13 107772014 107772219 -12512093 - B3 SINE B2 -5 211 1 5 1407 364 141 27 40 chr13 107772310 107772384 -12511928 - B1_Mur2 SINE Alu -43 106 34 5 1407 354 317 95 48 chr13 107772872 107772998 -12511314 - RSINE1 SINE B4 0 165 34 5 1407 523 89 70 0 chr13 107773035 107773123 -12511189 - B1_Mus2 SINE Alu -2 145 1 5 1407 308 343 102 0 chr13 107773129 107773237 -12511075 - PB1 SINE Alu -5 122 4 5 1407 230 373 0 0 chr13 107773180 107773255 -12511057 - B4A SINE B4 -147 145 71 5 1407 1147 98 81 6 chr13 107773547 107773559 -12510753 - B2_Mm2 SINE B2 -6 189 178 5 1407 222 37 0 0 chr13 107773559 107773586 -12510726 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 1407 1147 98 81 6 chr13 107773586 107773747 -12510565 - B2_Mm2 SINE B2 -18 177 3 5 1407 245 213 83 159 chr13 107774023 107774168 -12510144 - B3A SINE B2 -64 134 1 5 1407 22 35 0 0 chr13 107774182 107774211 -12510101 + AT_rich Low_complexity Low_complexity 1 29 0 5 1407 1409 82 0 20 chr13 107774272 107774470 -12509842 + B2_Mm2 SINE B2 2 195 0 5 1407 312 212 50 0 chr13 107775966 107776046 -12508266 - PB1D10 SINE Alu -1 116 33 5 1407 264 59 0 0 chr13 107776086 107776120 -12508192 + (A)n Simple_repeat Simple_repeat 1 34 0 5 1407 250 308 98 23 chr13 107776454 107776587 -12507725 - B1_Mus2 SINE Alu -4 143 1 5 1407 353 305 58 25 chr13 107776468 107776589 -12507723 - ID_B1 SINE B4 -20 204 80 5 1407 213 139 0 0 chr13 107777760 107777803 -12506509 + (A)n Simple_repeat Simple_repeat 1 43 0 5 1407 433 225 53 18 chr13 107778251 107778364 -12505948 + PB1D7 SINE Alu 2 118 -2 5 1407 661 180 164 0 chr13 107778369 107778497 -12505815 + B1_Mur4 SINE Alu 2 150 0 5 1407 198 0 0 0 chr13 107778497 107778519 -12505793 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1407 213 322 0 0 chr13 107778660 107778719 -12505593 + B1_Mus2 SINE Alu 43 101 -46 5 1407 387 298 61 0 chr13 107779012 107779143 -12505169 + ID_B1 SINE B4 77 215 -9 6 1407 1329 41 0 0 chr13 107779401 107779548 -12504764 + B1_Mm SINE Alu 1 147 0 6 1407 21 0 0 0 chr13 107779548 107779569 -12504743 + AT_rich Low_complexity Low_complexity 1 21 0 6 1407 578 284 52 0 chr13 107779794 107779928 -12504384 - B1F2 SINE Alu -1 148 8 6 1407 510 31 0 0 chr13 107780555 107780619 -12503693 + (CA)n Simple_repeat Simple_repeat 2 65 0 6 1407 306 0 0 0 chr13 107781036 107781070 -12503242 + (TG)n Simple_repeat Simple_repeat 2 35 0 6 1407 414 229 135 22 chr13 107781104 107781263 -12503049 - B4A SINE B4 -62 230 57 6 1407 370 338 21 50 chr13 107781432 107781572 -12502740 + B4A SINE B4 1 136 -156 6 1407 227 368 21 0 chr13 107781574 107781669 -12502643 + RSINE1 SINE B4 69 165 0 6 1407 232 295 51 0 chr13 107782016 107782094 -12502218 + MER5B DNA MER1_type 95 176 -2 6 1407 1197 69 0 7 chr13 107782757 107782903 -12501409 - B1_Mus2 SINE Alu 0 147 3 6 1407 775 266 96 0 chr13 107783627 107783815 -12500497 - B3 SINE B2 -10 206 1 6 1407 1469 78 19 0 chr13 107784286 107784491 -12499821 + MT2B2 LTR ERVL 376 584 0 6 1407 281 336 8 126 chr13 107784509 107784628 -12499684 - PB1D10 SINE Alu -12 105 1 6 1407 393 297 9 73 chr13 107784521 107784630 -12499682 - ID_B1 SINE B4 -43 181 80 6 1407 250 264 288 14 chr13 107784755 107784901 -12499411 + B3A SINE B2 2 187 -11 6 1407 220 326 21 21 chr13 107785216 107785310 -12499002 + L2 LINE L2 2716 2809 -610 6 1407 366 353 13 0 chr13 107785319 107785421 -12498891 + B1F SINE Alu 1 114 -35 6 1407 185 0 0 39 chr13 107785430 107785456 -12498856 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 6 1407 251 320 137 23 chr13 107785456 107785475 -12498837 + B4A SINE B4 215 231 -61 6 1407 438 306 158 5 chr13 107785473 107785657 -12498655 + B4A SINE B4 29 240 -52 6 1407 181 268 105 18 chr13 107785755 107785812 -12498500 + L2 LINE L2 2826 2887 -532 6 1407 761 176 45 22 chr13 107785837 107785971 -12498341 - B1_Mur1 SINE Alu -11 138 2 6 1407 562 205 40 64 chr13 107786282 107786407 -12497905 + RSINE1 SINE B4 11 132 -33 6 1407 253 227 309 0 chr13 107786491 107786601 -12497711 - LTR16B LTR ERVL -11 452 309 6 1407 1436 40 0 0 chr13 107786748 107786922 -12497390 - MT2C_Mm LTR ERVL 0 475 302 6 1407 1651 30 0 0 chr13 107786920 107787120 -12497192 - MT2C_Mm LTR ERVL -275 200 1 6 1407 260 287 0 130 chr13 107787618 107787726 -12496586 + PB1 SINE Alu 34 127 0 6 1407 1349 27 0 0 chr13 107787905 107788052 -12496260 - B1_Mm SINE Alu 0 147 1 6 1407 734 206 43 0 chr13 107788331 107788472 -12495840 + B3 SINE B2 67 213 -3 6 1407 2671 68 3 52 chr13 107788953 107789297 -12495015 + ORR1A2 LTR MaLR 1 327 0 6 1407 770 229 13 25 chr13 107789571 107789728 -12494584 - RSINE1 SINE B4 0 165 11 6 1407 399 194 59 30 chr13 107789789 107789890 -12494422 + ID_B1 SINE B4 118 221 -3 6 1407 1151 39 0 0 chr13 107789919 107790048 -12494264 + B1_Mm SINE Alu 3 131 -16 6 1407 682 182 105 8 chr13 107790373 107790506 -12493806 - B1_Mus2 SINE Alu 0 147 2 6 1407 774 261 143 19 chr13 107790618 107790876 -12493436 - B4 SINE B4 -2 290 1 6 1407 236 202 99 132 chr13 107791335 107791426 -12492886 + MTEb LTR MaLR 278 365 -14 6 1407 236 264 31 71 chr13 107792064 107792162 -12492150 + MLT1A1 LTR MaLR 1 94 -314 6 1407 225 195 89 25 chr13 107792365 107792444 -12491868 + MLT1A1 LTR MaLR 288 371 -19 6 1407 2337 140 34 32 chr13 107792668 107792804 -12491508 + MTC LTR MaLR 1 147 -274 6 1407 2469 138 102 5 chr13 107792804 107793204 -12491108 + BGLII_B LTR ERVK 3 441 0 6 1407 2337 140 34 32 chr13 107793204 107793479 -12490833 + MTC LTR MaLR 148 413 -8 6 1407 3018 72 74 0 chr13 107793814 107794205 -12490107 + BGLII LTR ERVK 1 420 -1 6 1407 324 0 0 0 chr13 107794207 107794243 -12490069 + (TG)n Simple_repeat Simple_repeat 1 36 0 6 1407 988 241 110 20 chr13 107794249 107794503 -12489809 - B4 SINE B4 -14 278 2 6 1407 27 29 0 0 chr13 107795359 107795393 -12488919 + AT_rich Low_complexity Low_complexity 1 34 0 6 1407 26 0 0 0 chr13 107795553 107795579 -12488733 + AT_rich Low_complexity Low_complexity 1 26 0 6 1407 272 167 181 0 chr13 107795632 107795704 -12488608 + RSINE1 SINE B4 50 134 -31 6 1407 333 0 0 0 chr13 107795707 107795744 -12488568 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1407 221 0 35 0 chr13 107796180 107796209 -12488103 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 6 1407 21 0 0 0 chr13 107796408 107796429 -12487883 + AT_rich Low_complexity Low_complexity 1 21 0 6 1407 263 336 8 56 chr13 107797604 107797730 -12486582 + RSINE1 SINE B4 44 163 -2 6 1407 462 275 56 71 chr13 107798493 107798689 -12485623 + MER106A DNA MER1_type 21 213 -23 6 1407 23 78 0 0 chr13 107799041 107799092 -12485220 + AT_rich Low_complexity Low_complexity 1 51 0 6 1407 629 219 6 91 chr13 107799092 107799268 -12485044 + RSINE1 SINE B4 4 164 -1 6 1407 305 200 0 125 chr13 107799442 107799522 -12484790 + PB1D10 SINE Alu 42 111 -6 6 1407 1067 52 0 0 chr13 107799530 107799664 -12484648 + B1_Mus1 SINE Alu 15 148 0 6 1407 204 179 0 0 chr13 107799664 107799703 -12484609 + GA-rich Low_complexity Low_complexity 2 40 0 6 1407 246 32 0 0 chr13 107799785 107799816 -12484496 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 6 1407 187 314 45 89 chr13 107800108 107800220 -12484092 - L2b LINE L2 -5 3370 3264 6 1407 234 333 0 0 chr13 107800637 107800700 -12483612 - L2b LINE L2 -956 2463 2401 6 1407 1768 189 71 11 chr13 107801723 107802087 -12482225 + ORR1B1 LTR MaLR 1 386 -8 6 1407 521 247 110 53 chr13 107802620 107802829 -12481483 + ID_B1 SINE B4 4 224 0 6 1407 621 264 228 0 chr13 107802951 107803205 -12481107 - L1MC1 LINE L1 -31 6302 5991 6 1407 286 224 90 26 chr13 107803456 107803534 -12480778 + B2_Mm2 SINE B2 18 100 -95 6 1407 180 323 121 0 chr13 107804282 107804381 -12479931 + MIRb SINE MIR 113 223 -45 6 1407 276 221 30 10 chr13 107804433 107804512 -12479800 - PB1D9 SINE Alu -7 113 37 6 1407 24 0 0 0 chr13 107805757 107805781 -12478531 + AT_rich Low_complexity Low_complexity 1 24 0 6 1407 328 287 95 9 chr13 107805786 107805902 -12478410 - B3 SINE B2 -11 205 80 6 1407 1106 96 0 33 chr13 107806234 107806385 -12477927 - B1_Mus2 SINE Alu 0 147 2 6 1407 479 241 32 57 chr13 107806642 107806765 -12477547 - PB1D7 SINE Alu 0 120 1 6 1407 3563 91 29 2 chr13 107807076 107807560 -12476752 + Lx LINE L1 6152 6648 -6 6 1407 210 227 0 0 chr13 107808081 107808125 -12476187 + B3 SINE B2 1 44 -172 6 1407 509 275 8 55 chr13 107809173 107809300 -12475012 - RSINE1 SINE B4 0 165 45 6 1407 902 129 7 13 chr13 107809509 107809658 -12474654 - URR1A DNA MER1_type 0 226 79 6 1407 284 214 103 35 chr13 107810324 107810411 -12473901 + ID_B1 SINE B4 131 223 -1 6 1407 240 260 23 23 chr13 107812168 107812298 -12472014 + (CGG)n Simple_repeat Simple_repeat 3 132 0 6 1407 396 59 0 0 chr13 107812323 107812374 -12471938 + (CGGG)n Simple_repeat Simple_repeat 4 54 0 6 1407 21 71 0 0 chr13 107812474 107812516 -12471796 + GC_rich Low_complexity Low_complexity 1 42 0 6 1407 379 239 242 0 chr13 107813457 107813604 -12470708 - ID_B1 SINE B4 0 224 42 6 1407 1230 218 133 3 chr13 107813616 107813938 -12470374 + ORR1D1 LTR MaLR 11 374 0 6 1407 1148 121 20 69 chr13 107814119 107814302 -12470010 - B2_Mm2 SINE B2 0 195 22 6 1407 3697 25 0 132 chr13 107814302 107814804 -12469508 - RLTR10C LTR ERVK 0 436 1 6 1407 1148 121 20 69 chr13 107814804 107814824 -12469488 - B2_Mm2 SINE B2 -174 21 2 6 1407 432 122 0 0 chr13 107814841 107814923 -12469389 + (TC)n Simple_repeat Simple_repeat 2 83 0 6 1407 198 0 0 0 chr13 107814923 107814945 -12469367 + (CA)n Simple_repeat Simple_repeat 1 22 0 6 1407 677 320 77 47 chr13 107814947 107815285 -12469027 - ORR1E LTR MaLR -11 348 1 6 1407 2062 166 87 79 chr13 107815352 107816166 -12468146 - RMER6A LTR ERVK 0 756 13 6 1407 294 388 62 0 chr13 107816488 107816617 -12467695 - ID_B1 SINE B4 -7 217 81 6 1407 198 0 0 0 chr13 107816713 107816735 -12467577 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 6 1407 260 256 0 142 chr13 107816794 107816817 -12467495 + MLT1A1 LTR MaLR 1 23 -385 6 1407 228 35 0 0 chr13 107816817 107816846 -12467466 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1407 260 256 0 142 chr13 107816846 107816963 -12467349 + MLT1A1 LTR MaLR 24 121 -287 6 1407 1219 92 92 0 chr13 107817040 107817204 -12467108 + B2_Mm1t SINE B2 1 179 -14 6 1407 271 268 38 61 chr13 107817304 107817363 -12466949 + MLT1A1 LTR MaLR 281 340 -68 6 1407 958 291 88 44 chr13 107817363 107817579 -12466733 - ORR1E LTR MaLR 0 359 145 6 1407 1554 78 5 0 chr13 107817579 107817771 -12466541 + B2_Mm1t SINE B2 1 193 0 6 1407 958 291 88 44 chr13 107817771 107817895 -12466417 - ORR1E LTR MaLR -215 144 4 6 1407 271 268 38 61 chr13 107817895 107817966 -12466346 + MLT1A1 LTR MaLR 341 408 0 6 1407 297 0 0 0 chr13 107818349 107818382 -12465930 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 6 1407 201 108 0 0 chr13 107818489 107818526 -12465786 + (CAAAC)n Simple_repeat Simple_repeat 2 38 0 6 1407 434 315 34 20 chr13 107818969 107819115 -12465197 + MIRb SINE MIR 7 154 -114 6 1407 976 250 80 22 chr13 107819119 107819393 -12464919 + B4 SINE B4 1 290 -2 6 1407 252 130 0 0 chr13 107819655 107819701 -12464611 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1407 3536 155 107 125 chr13 107819747 107820513 -12463799 + RMER19B LTR ERVK 1 763 -139 6 1407 1199 63 7 0 chr13 107820513 107820656 -12463656 - B1_Mus1 SINE Alu -3 145 2 6 1407 3536 155 107 125 chr13 107820656 107820794 -12463518 + RMER19B LTR ERVK 764 889 -13 6 1407 298 316 0 13 chr13 107821322 107821399 -12462913 - RSINE1 SINE B4 -87 78 3 6 1407 584 206 7 0 chr13 107821401 107821542 -12462770 + C-rich Low_complexity Low_complexity 2 143 0 6 1407 259 300 0 0 chr13 107821585 107821635 -12462677 - ID4_ SINE ID -32 51 2 6 1407 378 0 0 0 chr13 107821644 107821686 -12462626 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 6 1407 514 376 61 14 chr13 107822849 107823127 -12461185 - LTR16A LTR ERVL -2 449 159 7 1407 204 267 0 0 chr13 107823846 107823891 -12460421 + G-rich Low_complexity Low_complexity 1 45 0 7 1407 252 247 38 24 chr13 107823983 107824077 -12460235 + PB1 SINE Alu 1 95 -25 7 1407 511 267 104 50 chr13 107824161 107824525 -12459787 + RLTR11A2 LTR ERVK 6 291 -68 7 1407 211 355 166 12 chr13 107825455 107825780 -12458532 - L2a LINE L2 -1 3425 3051 7 1407 445 388 72 14 chr13 107825808 107826017 -12458295 - LTR16A LTR ERVL -96 355 135 7 1407 282 242 79 158 chr13 107826288 107826440 -12457872 + B1F1 SINE Alu 4 143 -6 7 1407 234 255 0 0 chr13 107826440 107826487 -12457825 + polypurine Low_complexity Low_complexity 1 47 0 7 1407 1352 102 16 11 chr13 107827057 107827246 -12457066 + B2_Mm2 SINE B2 1 190 -5 7 1407 867 311 16 41 chr13 107827386 107827704 -12456608 + RLTR18 LTR ERVK 1 310 -306 7 1407 351 305 0 10 chr13 107827784 107827880 -12456432 + RLTR18B LTR ERVK 234 328 -184 7 1407 311 269 25 13 chr13 107828380 107828459 -12455853 - LTR79 LTR ERVL -328 199 120 7 1407 327 260 76 48 chr13 107828529 107828634 -12455678 + RSINE1 SINE B4 39 146 -19 7 1407 353 292 9 9 chr13 107828659 107828766 -12455546 + ID_B1 SINE B4 78 184 -40 7 1407 191 380 51 0 chr13 107829029 107829108 -12455204 + MER5A DNA MER1_type 57 139 -50 7 1407 375 60 0 0 chr13 107829144 107829194 -12455118 + (TG)n Simple_repeat Simple_repeat 1 50 0 7 1407 21 57 0 0 chr13 107829446 107829481 -12454831 + AT_rich Low_complexity Low_complexity 1 35 0 7 1407 337 328 226 9 chr13 107829560 107829782 -12454530 - MLT2F LTR ERVL -342 321 52 7 1407 180 274 77 46 chr13 107829837 107829902 -12454410 - L2a LINE L2 -268 3158 3092 7 1407 235 204 0 39 chr13 107830236 107830287 -12454025 + ID_B1 SINE B4 154 202 -22 7 1407 378 0 0 0 chr13 107830298 107830340 -12453972 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1407 238 292 15 15 chr13 107830348 107830414 -12453898 - MLT1K LTR MaLR -345 250 185 7 1407 709 328 157 88 chr13 107830418 107830721 -12453591 - MLT1F LTR MaLR -9 551 199 7 1407 1524 140 14 0 chr13 107830721 107830943 -12453369 - URR1B DNA MER1_type 0 225 1 7 1407 709 340 36 25 chr13 107830943 107831056 -12453256 - MLT1F LTR MaLR -350 198 87 7 1407 194 0 0 37 chr13 107831255 107831282 -12453030 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1407 587 153 10 58 chr13 107831286 107831390 -12452922 - B1_Mus2 SINE Alu -39 108 10 7 1407 326 252 26 86 chr13 107831390 107831401 -12452911 - ID_B1 SINE B4 -34 188 81 7 1407 396 0 0 0 chr13 107831405 107831449 -12452863 + (TTG)n Simple_repeat Simple_repeat 2 45 0 7 1407 242 125 0 20 chr13 107831693 107831742 -12452570 + (TTTTTG)n Simple_repeat Simple_repeat 2 49 0 7 1407 1419 132 27 9 chr13 107831819 107832040 -12452272 + URR1B DNA MER1_type 1 225 0 7 1407 505 76 12 12 chr13 107833453 107833533 -12450779 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 7 1407 515 280 127 9 chr13 107833559 107833810 -12450502 - L1MA4 LINE L1 -362 5938 5653 7 1407 274 289 228 6 chr13 107833827 107833994 -12450318 - ID_B1 SINE B4 -9 215 12 7 1407 1034 168 127 0 chr13 107834545 107834742 -12449570 + URR1A DNA MER1_type 1 222 -4 7 1407 222 258 15 38 chr13 107835699 107835832 -12448480 + (TTAA)n Simple_repeat Simple_repeat 4 133 0 7 1407 1079 232 34 23 chr13 107836073 107836338 -12447974 + B4 SINE B4 4 271 -21 7 1407 327 277 106 9 chr13 107836892 107837005 -12447307 - B1F SINE Alu -17 132 9 7 1407 3112 146 101 65 chr13 107837005 107837671 -12446641 - RMER6C LTR ERVK 0 690 1 7 1407 383 224 36 27 chr13 107837822 107837932 -12446380 + MLT2D LTR ERVL 4 114 -350 7 1407 367 157 149 47 chr13 107837932 107838039 -12446273 - Lx9 LINE L1 -9 7635 7518 7 1407 307 161 18 0 chr13 107838036 107838092 -12446220 + Lx9 LINE L1 7422 7478 -166 7 1407 342 0 0 0 chr13 107838092 107838130 -12446182 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1407 627 256 50 51 chr13 107838131 107838383 -12445929 + MLT2D LTR ERVL 80 335 -62 7 1407 1075 82 0 19 chr13 107838452 107838613 -12445699 + B2_Mm1a SINE B2 1 158 -35 7 1407 450 0 0 0 chr13 107838619 107838669 -12445643 + (GAAA)n Simple_repeat Simple_repeat 2 51 0 7 1407 751 259 10 16 chr13 107838721 107838913 -12445399 + ID_B1 SINE B4 19 209 -15 7 1407 21 36 0 0 chr13 107839313 107839341 -12444971 + AT_rich Low_complexity Low_complexity 1 28 0 7 1407 267 31 0 0 chr13 107839369 107839401 -12444911 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 7 1407 509 0 16 0 chr13 107839432 107839493 -12444819 + (TC)n Simple_repeat Simple_repeat 1 62 0 7 1407 342 0 0 0 chr13 107839493 107839530 -12444782 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1407 622 164 55 0 chr13 107839531 107839641 -12444671 - B1_Mur2 SINE Alu -19 130 15 7 1407 258 247 0 63 chr13 107839557 107839652 -12444660 - MT2B LTR ERVL -344 257 169 7 1407 589 273 0 0 chr13 107839681 107839824 -12444488 - ID_B1 SINE B4 -2 222 80 7 1407 586 250 155 54 chr13 107840045 107840303 -12444009 + B4A SINE B4 9 292 0 7 1407 1252 119 126 150 chr13 107840525 107840851 -12443461 - ORR1C1 LTR MaLR -60 318 1 7 1407 267 321 16 115 chr13 107840942 107841185 -12443127 - ORR1E LTR MaLR -41 318 100 7 1407 1158 81 0 0 chr13 107842330 107842478 -12441834 - B1_Mus1 SINE Alu 0 148 1 7 1407 186 333 38 25 chr13 107843066 107843146 -12441166 + MIRb SINE MIR 2 82 -186 7 1407 245 274 11 67 chr13 107843175 107843210 -12441102 + B4 SINE B4 56 85 -207 7 1407 297 336 61 0 chr13 107843210 107843341 -12440971 + B1_Mur3 SINE Alu 1 139 -10 7 1407 576 202 18 0 chr13 107843353 107843462 -12440850 + PB1D9 SINE Alu 2 112 -8 7 1407 799 115 164 0 chr13 107843499 107843621 -12440691 + B1_Mus1 SINE Alu 2 143 -5 7 1407 653 24 12 0 chr13 107843629 107843712 -12440600 + (CAAAC)n Simple_repeat Simple_repeat 2 85 0 7 1407 324 149 312 18 chr13 107843773 107843882 -12440430 + RSINE1 SINE B4 15 155 -10 7 1407 818 173 0 0 chr13 107843916 107844055 -12440257 + B1_Mur2 SINE Alu 9 147 -2 7 1407 2486 90 20 3 chr13 107844080 107844424 -12439888 + Lx2 LINE L1 6648 6997 0 7 1407 306 0 0 0 chr13 107844500 107844534 -12439778 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1407 261 0 0 0 chr13 107844623 107844652 -12439660 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 7 1407 248 381 97 0 chr13 107845715 107845891 -12438421 + MER115 DNA Tip100 58 250 -443 7 1407 193 340 0 29 chr13 107846036 107846139 -12438173 - MER5A DNA MER1_type -2 187 88 7 1407 990 242 34 55 chr13 107846291 107846692 -12437620 - ORR1E LTR MaLR 0 370 1 7 1407 24 32 0 0 chr13 107847744 107847775 -12436537 + AT_rich Low_complexity Low_complexity 1 31 0 7 1407 326 257 124 35 chr13 107847776 107847921 -12436391 - Lx8 LINE L1 -6 7467 7310 7 1407 1258 223 107 28 chr13 107847927 107848254 -12436058 - Lx8 LINE L1 -325 7148 6796 7 1407 424 240 112 13 chr13 107848262 107848414 -12435898 + MIR SINE MIR 55 221 -41 7 1407 3025 63 40 0 chr13 107848437 107848832 -12435480 + RLTR10A LTR ERVK 1 411 0 7 1407 2228 97 31 6 chr13 107849040 107849361 -12434951 + ORR1A4 LTR MaLR 1 329 0 7 1407 201 289 66 11 chr13 107850103 107850194 -12434118 - L3b LINE CR1 -124 358 263 7 1407 424 259 9 9 chr13 107851100 107851213 -12433099 + RMER15 LTR ERVL 1 113 -462 7 1407 289 257 35 172 chr13 107851251 107851420 -12432892 + MTEa LTR MaLR 1 146 -233 7 1407 1083 251 92 112 chr13 107851281 107851783 -12432529 + MT2A LTR ERVL 35 526 -7 7 1407 384 316 53 6 chr13 107852006 107852070 -12432242 + ID_B1 SINE B4 3 179 -45 7 1407 390 219 0 86 chr13 107852070 107852175 -12432137 + MT2B LTR ERVL 159 254 -347 7 1407 592 172 95 0 chr13 107852083 107852199 -12432113 + B1_Mus1 SINE Alu 9 135 -13 7 1407 183 42 0 0 chr13 107852199 107852223 -12432089 + (CAAAA)n Simple_repeat Simple_repeat 1 24 0 7 1407 3857 59 2 2 chr13 107852256 107852730 -12431582 + L1_Mus1 LINE L1 6094 6567 0 7 1407 402 115 0 0 chr13 107852765 107852826 -12431486 + (GAAA)n Simple_repeat Simple_repeat 2 62 0 7 1407 209 186 31 92 chr13 107852969 107853034 -12431278 - L2c LINE L2 0 3387 3327 7 1407 25 0 0 0 chr13 107853240 107853265 -12431047 + AT_rich Low_complexity Low_complexity 1 25 0 7 1407 322 297 55 0 chr13 107853441 107853569 -12430743 + MLT1L LTR MaLR 169 303 -307 7 1407 237 265 71 12 chr13 107853713 107853797 -12430515 + MLT1L LTR MaLR 521 609 -1 7 1407 309 153 3 14 chr13 107853907 107853969 -12430343 - B1_Mur4 SINE Alu -57 60 2 7 1407 238 224 119 0 chr13 107853985 107854052 -12430260 - ID_B1 SINE B4 -7 217 143 7 1407 672 161 0 22 chr13 107854073 107854257 -12430055 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1407 299 145 14 0 chr13 107854297 107854366 -12429946 + (TG)n Simple_repeat Simple_repeat 2 71 0 7 1407 474 263 88 39 chr13 107854375 107854557 -12429755 - B4A SINE B4 0 292 102 7 1407 221 260 216 10 chr13 107854527 107854624 -12429688 - B3A SINE B2 -76 122 6 7 1407 542 320 0 11 chr13 107854617 107854791 -12429521 - ID_B1 SINE B4 -48 176 5 7 1407 186 297 16 0 chr13 107854865 107854929 -12429383 - MIRb SINE MIR -14 254 190 7 1407 235 322 111 43 chr13 107855832 107855994 -12428318 + LTR16A LTR ERVL 17 189 -262 7 1407 228 214 50 10 chr13 107856231 107856330 -12427982 + (TA)n Simple_repeat Simple_repeat 1 103 0 7 1407 13410 145 75 129 chr13 107856502 107856812 -12427500 - L1_Mur3 LINE L1 -1467 4413 4098 7 1407 1524 58 5 0 chr13 107856812 107857001 -12427311 + B2_Mm1t SINE B2 2 191 -2 7 1407 13410 145 75 129 chr13 107857001 107857123 -12427189 - L1_Mur3 LINE L1 -1783 4097 3935 7 1407 306 0 0 0 chr13 107857123 107857157 -12427155 + (TA)n Simple_repeat Simple_repeat 1 34 0 7 1407 13410 145 75 129 chr13 107857157 107857409 -12426903 - L1_Mur3 LINE L1 -1946 3934 3665 7 1407 1554 198 41 49 chr13 107857409 107857775 -12426537 - ORR1B2 LTR MaLR -4 363 1 7 1407 13410 145 75 129 chr13 107857775 107859245 -12425067 - L1_Mur3 LINE L1 -1946 3664 2087 7 1407 207 69 0 0 chr13 107859245 107859274 -12425038 + (TTG)n Simple_repeat Simple_repeat 1 29 0 7 1407 13410 147 64 103 chr13 107859274 107860383 -12423929 - L1_Mur3 LINE L1 -3794 2086 960 7 1407 794 72 166 0 chr13 107860383 107860522 -12423790 - B2_Mm1a SINE B2 -2 191 30 8 1407 450 0 0 0 chr13 107860523 107860573 -12423739 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 8 1407 1159 76 0 0 chr13 107860574 107860732 -12423580 - B2_Mm2 SINE B2 -37 158 1 8 1407 3446 203 80 19 chr13 107860732 107861596 -12422716 - L1_Mur3 LINE L1 -6757 971 55 7 1407 1194 85 84 6 chr13 107861630 107861808 -12422504 - B2_Mm2 SINE B2 -2 193 2 8 1407 475 267 0 0 chr13 107861980 107862081 -12422231 + RSINE1 SINE B4 8 108 -57 8 1407 29 78 0 0 chr13 107862167 107862231 -12422081 + AT_rich Low_complexity Low_complexity 1 64 0 8 1407 452 301 84 0 chr13 107863741 107863907 -12420405 - RMER30 DNA MER1_type -21 181 2 8 1407 566 255 0 51 chr13 107864092 107864249 -12420063 + B1F SINE Alu 1 149 0 8 1407 373 260 6 125 chr13 107864324 107864500 -12419812 - RLTR11B LTR ERVK -15 438 284 8 1407 923 221 15 52 chr13 107864627 107864895 -12419417 - RLTR11B LTR ERVK -195 258 1 8 1407 253 350 0 39 chr13 107865326 107865430 -12418882 + MER94 DNA AcHobo 16 115 -19 8 1407 221 179 0 35 chr13 107866283 107866311 -12418001 + polypyrimidine Low_complexity Low_complexity 31 58 0 8 1407 1410 78 0 0 chr13 107866311 107866671 -12417641 + (TTC)n Simple_repeat Simple_repeat 1 360 0 8 1407 221 179 0 35 chr13 107866671 107866686 -12417626 + polypyrimidine Low_complexity Low_complexity 17 30 0 8 1407 1052 125 0 17 chr13 107866686 107866865 -12417447 + (TTCTCC)n Simple_repeat Simple_repeat 3 178 0 8 1407 221 179 0 35 chr13 107866865 107866877 -12417435 + polypyrimidine Low_complexity Low_complexity 5 16 0 8 1407 829 269 19 5 chr13 107866883 107867096 -12417216 - B3 SINE B2 0 216 1 8 1407 624 226 55 75 chr13 107867117 107867318 -12416994 - RMER30 DNA MER1_type -1 201 5 8 1407 211 364 127 0 chr13 107867370 107867598 -12416714 - L2c LINE L2 0 3387 3131 8 1407 372 22 0 0 chr13 107867756 107867801 -12416511 + (CA)n Simple_repeat Simple_repeat 2 46 0 8 1407 195 328 94 46 chr13 107867804 107867986 -12416326 - MIRb SINE MIR -61 201 8 8 1407 1187 43 0 0 chr13 107868722 107868860 -12415452 + B1_Mus2 SINE Alu 1 138 -9 8 1407 216 0 0 0 chr13 107868860 107868884 -12415428 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 1407 518 142 22 124 chr13 107869079 107869216 -12415096 - RLTR16 LTR ERVK 0 505 383 8 1407 4453 137 87 1 chr13 107869218 107869630 -12414682 - MYSERV16_I-int LTR ERVK -354 1972 1522 8 1407 279 0 0 0 chr13 107869630 107869661 -12414651 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 8 1407 4453 164 66 28 chr13 107869661 107870304 -12414008 - MYSERV16_I-int LTR ERVK -740 2102 1103 8 1407 369 0 0 0 chr13 107870304 107870345 -12413967 + (CA)n Simple_repeat Simple_repeat 2 42 0 8 1407 1000 195 26 86 chr13 107870345 107870372 -12413940 - MYSERV16_I-int LTR ERVK -1624 702 682 8 1407 961 67 65 29 chr13 107870590 107870729 -12413583 - B1_Mus1 SINE Alu -1 147 4 8 1407 418 238 186 45 chr13 107870734 107870920 -12413392 - B3 SINE B2 -8 187 1 8 1407 745 246 33 33 chr13 107871650 107871860 -12412452 - B3 SINE B2 -6 210 1 8 175 1387 12 0 0 chr13 107872205 107872375 -12411937 + MTA_Mm LTR MaLR 1 170 -226 8 1408 450 0 0 0 chr13 107872502 107872552 -12411760 + (TC)n Simple_repeat Simple_repeat 2 51 0 8 1408 315 0 0 0 chr13 107872603 107872638 -12411674 + (CA)n Simple_repeat Simple_repeat 2 36 0 8 1408 626 205 66 0 chr13 107872710 107872832 -12411480 + B3 SINE B2 1 130 -86 8 1408 257 141 56 0 chr13 107872870 107872941 -12411371 + GA-rich Low_complexity Low_complexity 2 76 0 8 1408 1330 47 6 0 chr13 107873909 107874078 -12410234 + L1Md_T LINE L1 6413 6582 0 8 1408 253 140 59 20 chr13 107874106 107874157 -12410155 - L1MB4 LINE L1 -17 6163 6111 8 1408 327 311 0 48 chr13 107874353 107874539 -12409773 + C-rich Low_complexity Low_complexity 2 178 0 8 1408 563 316 60 28 chr13 107874639 107874854 -12409458 - Lx8 LINE L1 -185 7288 7067 8 1408 234 0 0 0 chr13 107874934 107874960 -12409352 + (T)n Simple_repeat Simple_repeat 1 26 0 8 1408 1230 41 0 0 chr13 107874960 107875106 -12409206 - B1_Mm SINE Alu 0 147 2 8 1408 232 241 0 36 chr13 107875113 107875169 -12409143 - Lx8 LINE L1 -542 6931 6878 8 1408 398 267 22 22 chr13 107875260 107875394 -12408918 - L1MB3 LINE L1 -7 6176 6043 8 1408 435 106 0 0 chr13 107875453 107875519 -12408793 + (TC)n Simple_repeat Simple_repeat 2 67 0 8 1408 1383 78 11 6 chr13 107875539 107875719 -12408593 - B2_Mm2 SINE B2 -14 181 1 8 1408 498 301 48 7 chr13 107876733 107876880 -12407432 + RSINE1 SINE B4 6 158 -7 8 1408 252 86 0 0 chr13 107876883 107876918 -12407394 + (CACCAT)n Simple_repeat Simple_repeat 1 35 0 8 1408 622 194 44 15 chr13 107876929 107877065 -12407247 + ID_B1 SINE B4 78 217 -7 8 1408 234 0 0 0 chr13 107877238 107877264 -12407048 + (CA)n Simple_repeat Simple_repeat 2 27 0 8 1408 2243 156 107 7 chr13 107878377 107878816 -12405496 + RLTR28 LTR ERVL 42 524 0 8 1408 2579 103 40 55 chr13 107878990 107879410 -12404902 + Lx3B LINE L1 6556 6969 -4 8 1408 243 0 0 0 chr13 107879424 107879451 -12404861 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 8 1408 243 325 11 11 chr13 107879571 107879658 -12404654 - RSINE1 SINE B4 0 165 79 8 1408 755 114 113 15 chr13 107880430 107880563 -12403749 + B1_Mur4 SINE Alu 5 150 0 8 1408 23 0 0 0 chr13 107880573 107880596 -12403716 + AT_rich Low_complexity Low_complexity 1 23 0 8 1408 297 0 0 0 chr13 107880785 107880818 -12403494 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 8 1408 3135 70 5 8 chr13 107881034 107881435 -12402877 - MTB LTR MaLR 0 400 1 8 1408 207 356 60 32 chr13 107883087 107883306 -12401006 - MIR SINE MIR -22 246 13 8 1408 875 239 64 10 chr13 107883474 107883677 -12400635 - B3 SINE B2 -2 214 1 8 1408 180 0 0 0 chr13 107884087 107884107 -12400205 + (TGG)n Simple_repeat Simple_repeat 2 21 0 8 1408 803 157 0 36 chr13 107884400 107884539 -12399773 + B1_Mur3 SINE Alu 3 136 -13 8 1408 288 0 0 0 chr13 107884544 107884576 -12399736 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 8 1408 343 312 32 6 chr13 107884981 107885139 -12399173 + MER103 DNA DNA 2 163 -3 8 1408 414 0 0 0 chr13 107885748 107885794 -12398518 + (TC)n Simple_repeat Simple_repeat 1 46 0 8 1408 251 300 0 0 chr13 107885800 107885880 -12398432 + (TG)n Simple_repeat Simple_repeat 1 80 0 8 1408 487 267 157 27 chr13 107885880 107886065 -12398247 - B4A SINE B4 0 292 84 8 1408 274 284 91 9 chr13 107886363 107886473 -12397839 - L1MC2 LINE L1 -64 6280 6162 8 1408 512 280 140 0 chr13 107886629 107886836 -12397476 - L1MC2 LINE L1 -192 6152 5917 8 1408 247 343 38 0 chr13 107887756 107887861 -12396451 - LTR33 LTR ERVL -125 390 282 8 1408 287 309 74 63 chr13 107888884 107889074 -12395238 + LTR31 LTR ERV1 395 586 -33 8 1408 838 208 33 28 chr13 107889135 107889348 -12394964 + B3 SINE B2 3 216 0 8 1408 1283 90 11 17 chr13 107889354 107889535 -12394777 + B2_Mm1t SINE B2 2 181 -12 8 1408 311 111 0 36 chr13 107889600 107889656 -12394656 + B2_Mm2 SINE B2 48 101 -94 8 1408 195 136 43 64 chr13 107891191 107891238 -12393074 - MIR3 SINE MIR -39 169 124 8 1408 423 0 0 0 chr13 107892982 107893029 -12391283 + (CAAG)n Simple_repeat Simple_repeat 3 49 0 8 1408 273 260 117 0 chr13 107893030 107893107 -12391205 + ID_B1 SINE B4 87 172 -52 8 1408 2128 93 55 0 chr13 107893752 107894064 -12390248 - L1_Mm LINE L1 -585 5298 4970 8 1408 245 100 0 0 chr13 107894064 107894104 -12390208 - B3A SINE B2 -157 41 2 8 1408 494 294 77 0 chr13 107894591 107894761 -12389551 - B3 SINE B2 0 216 34 8 1408 450 0 0 0 chr13 107894761 107894811 -12389501 + (TC)n Simple_repeat Simple_repeat 2 51 0 8 1408 692 246 82 5 chr13 107894944 107895140 -12389172 - B3 SINE B2 -5 211 1 8 1408 234 351 0 13 chr13 107895164 107895239 -12389073 - ID4 SINE ID -8 75 2 8 1408 1353 253 102 18 chr13 107895381 107895824 -12388488 - L1MB2 LINE L1 -2 6169 5690 8 1408 509 169 7 0 chr13 107895951 107896087 -12388225 + (TG)n Simple_repeat Simple_repeat 2 138 0 8 1408 669 251 6 79 chr13 107896088 107896265 -12388047 - RSINE1 SINE B4 0 165 2 8 1408 363 73 0 0 chr13 107896595 107896650 -12387662 + (CAGA)n Simple_repeat Simple_repeat 4 58 0 8 1408 251 280 0 0 chr13 107896663 107896738 -12387574 + GA-rich Low_complexity Low_complexity 2 76 0 8 1408 2362 83 12 56 chr13 107897119 107897461 -12386851 + ORR1A2 LTR MaLR 1 327 0 8 1408 1477 280 102 17 chr13 107898435 107898993 -12385319 + L1MB2 LINE L1 5277 5887 -284 8 1408 768 77 0 0 chr13 107898993 107899097 -12385215 + (TA)n Simple_repeat Simple_repeat 2 105 0 8 1408 299 208 23 125 chr13 107899127 107899215 -12385097 + MLT1F1 LTR MaLR 33 111 -458 8 1408 435 294 147 2 chr13 107899288 107899487 -12384825 + MLT1F LTR MaLR 330 546 -2 8 1408 189 0 0 0 chr13 107900293 107900314 -12383998 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 8 1408 1594 158 33 40 chr13 107900601 107900904 -12383408 + Lx4B LINE L1 6750 7050 -8 8 1408 807 238 20 25 chr13 107901033 107901231 -12383081 - B3A SINE B2 0 198 2 8 1408 32 26 0 0 chr13 107901311 107901350 -12382962 + AT_rich Low_complexity Low_complexity 1 39 0 8 1408 608 339 0 41 chr13 107902078 107902185 -12382127 + B4A SINE B4 31 130 -162 8 1408 3252 11 0 0 chr13 107902185 107902542 -12381770 + IAPEY2_LTR LTR ERVK 1 357 0 8 1408 608 339 0 41 chr13 107902542 107902631 -12381681 + B4A SINE B4 131 219 -73 8 1408 721 247 40 11 chr13 107902642 107902663 -12381649 + B3A SINE B2 1 20 -178 8 1408 3060 52 21 0 chr13 107902663 107903045 -12381267 + RLTR10 LTR ERVK 1 390 0 8 1408 721 247 40 11 chr13 107903045 107903199 -12381113 + B3A SINE B2 21 181 -17 8 1408 1201 41 0 27 chr13 107903403 107903553 -12380759 - B1_Mus2 SINE Alu 0 147 2 8 1408 633 250 0 7 chr13 107903747 107903888 -12380424 + ID_B1 SINE B4 85 224 0 8 1408 338 262 83 18 chr13 107904096 107904205 -12380107 + LTR41B LTR ERVL 52 167 -591 8 1408 248 318 106 34 chr13 107904430 107904723 -12379589 + LTR41B LTR ERVL 442 755 -3 8 1408 4485 61 19 16 chr13 107905039 107905619 -12378693 + L1_Mus2 LINE L1 5985 6566 0 9 1408 530 0 31 0 chr13 107905639 107905704 -12378608 + (GAAA)n Simple_repeat Simple_repeat 3 69 0 9 1408 345 304 11 51 chr13 107906253 107906296 -12378016 + polypyrimidine Low_complexity Low_complexity 132 172 0 9 1408 1205 48 0 0 chr13 107906296 107906443 -12377869 - B1_Mm SINE Alu 0 147 1 9 1408 415 319 11 28 chr13 107906443 107906707 -12377605 + CT-rich Low_complexity Low_complexity 1 259 0 9 1408 282 258 51 51 chr13 107906740 107906838 -12377474 - B1F1 SINE Alu -51 98 1 9 1408 403 168 21 0 chr13 107907144 107907239 -12377073 + (TA)n Simple_repeat Simple_repeat 1 97 0 9 1408 557 196 91 17 chr13 107907248 107907423 -12376889 - MT2A LTR ERVL -56 477 243 9 1408 373 350 0 14 chr13 107907435 107907453 -12376859 - MTE2b LTR MaLR -236 143 1 9 1408 639 200 0 16 chr13 107907453 107907580 -12376732 - MT2A LTR ERVL -408 125 1 9 1408 258 32 0 0 chr13 107908487 107908518 -12375794 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9 1408 569 174 148 0 chr13 107908525 107908640 -12375672 - B1_Mm SINE Alu -15 132 1 9 1408 548 296 81 42 chr13 107908907 107909341 -12374971 - L1ME4a LINE L1 -167 5957 5507 9 1408 1195 104 13 10 chr13 107909444 107910066 -12374246 + (TATG)n Simple_repeat Simple_repeat 1 623 0 9 1408 1133 73 5 32 chr13 107910088 107910273 -12374039 + (TATG)n Simple_repeat Simple_repeat 1 180 0 9 1408 781 163 7 52 chr13 107910293 107910448 -12373864 - B1_Mus1 SINE Alu 0 148 1 9 1408 402 264 44 52 chr13 107910738 107910874 -12373438 - B1F2 SINE Alu -5 144 10 9 1408 864 129 6 12 chr13 107911468 107911640 -12372672 + (TG)n Simple_repeat Simple_repeat 1 171 0 9 1408 491 223 151 32 chr13 107911649 107911834 -12372478 - B4A SINE B4 0 292 86 9 1408 2314 36 77 61 chr13 107911841 107912167 -12372145 + LSU-rRNA_Hsa rRNA rRNA 1555 1885 -3150 9 1408 189 74 0 0 chr13 107912286 107912313 -12371999 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 9 1408 643 252 0 19 chr13 107912322 107912476 -12371836 - RSINE1 SINE B4 0 165 15 9 1408 358 63 316 9 chr13 107912990 107913104 -12371208 - B2_Mm2 SINE B2 0 195 47 9 1408 5567 53 7 0 chr13 107913164 107913844 -12370468 + L1Md_F2 LINE L1 5891 6575 -7 9 1408 717 101 9 0 chr13 107913846 107913955 -12370357 - B2_Mm1t SINE B2 -82 111 2 9 1408 315 0 0 0 chr13 107914059 107914094 -12370218 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 9 1408 357 164 123 0 chr13 107914104 107914177 -12370135 - B1_Mur1 SINE Alu -18 131 50 9 1408 21 36 0 0 chr13 107914234 107914262 -12370050 + AT_rich Low_complexity Low_complexity 1 28 0 9 1408 593 224 18 42 chr13 107914824 107914992 -12369320 - RSINE1 SINE B4 0 165 2 9 1408 234 0 0 0 chr13 107915049 107915075 -12369237 + (CAAAG)n Simple_repeat Simple_repeat 3 28 0 9 1408 2026 193 50 15 chr13 107915999 107916159 -12368153 - MTD LTR MaLR -1 418 244 9 1408 195 42 0 0 chr13 107916159 107916183 -12368129 + (CGGAG)n Simple_repeat Simple_repeat 2 25 0 9 1408 2026 193 50 15 chr13 107916183 107916422 -12367890 - MTD LTR MaLR -176 243 6 9 1408 207 0 0 0 chr13 107916495 107916518 -12367794 + (T)n Simple_repeat Simple_repeat 1 23 0 9 1408 280 280 9 45 chr13 107917425 107917537 -12366775 - MLT2B3 LTR ERVL -48 512 405 9 1408 383 287 99 50 chr13 107917867 107918109 -12366203 + MLT1B LTR MaLR 1 254 -136 9 1408 542 167 8 0 chr13 107918109 107918241 -12366071 + GA-rich Low_complexity Low_complexity 2 134 0 9 1408 333 0 0 0 chr13 107918275 107918312 -12366000 + (GA)n Simple_repeat Simple_repeat 1 37 0 9 1408 1335 151 0 18 chr13 107918394 107918616 -12365696 + URR1B DNA MER1_type 7 224 -1 9 1408 423 284 25 56 chr13 107918442 107918640 -12365672 - CYRA11_Mm Unknown Y-chromosome -272 345 154 9 1408 652 256 30 32 chr13 107918908 107919142 -12365170 + L1M3 LINE L1 4909 5134 -1009 9 1408 450 0 0 0 chr13 107919322 107919372 -12364940 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1408 348 296 169 17 chr13 107919391 107919563 -12364749 - MLT2B3 LTR ERVL -348 206 9 9 1408 912 276 116 5 chr13 107919577 107920048 -12364264 + L1MA9 LINE L1 5232 5763 -549 9 1408 678 315 93 8 chr13 107920052 107920311 -12364001 + B4A SINE B4 8 288 -4 9 1408 1043 255 97 44 chr13 107920343 107920777 -12363535 + L1MA9 LINE L1 5755 6211 -101 9 1408 3220 56 5 2 chr13 107921444 107921838 -12362474 + MTA_Mm LTR MaLR 1 395 -1 9 1408 3353 79 46 11 chr13 107921987 107922446 -12361866 + MT2C_Mm LTR ERVL 1 475 0 9 1408 372 43 0 0 chr13 107924635 107924681 -12359631 + (TG)n Simple_repeat Simple_repeat 2 47 0 9 1408 227 289 0 0 chr13 107924831 107924883 -12359429 + (CA)n Simple_repeat Simple_repeat 1 52 0 9 1408 279 321 78 60 chr13 107925487 107925603 -12358709 + LFSINE_Vert SINE SINE 1 118 -341 9 1408 623 192 112 30 chr13 107926222 107926356 -12357956 + B1_Mur1 SINE Alu 5 149 0 9 1408 244 237 38 38 chr13 107927836 107927915 -12356397 - ID4_ SINE ID 0 83 5 9 1408 204 97 0 0 chr13 107928082 107928113 -12356199 + (CAA)n Simple_repeat Simple_repeat 2 32 0 9 1408 1095 51 0 0 chr13 107928357 107928495 -12355817 + (CA)n Simple_repeat Simple_repeat 2 139 0 9 1408 261 183 113 0 chr13 107929147 107929218 -12355094 - Charlie16a DNA MER1_type -133 209 131 9 1408 1254 99 50 0 chr13 107930398 107930580 -12353732 - B2_Mm2 SINE B2 -3 192 2 9 1408 615 275 7 20 chr13 107930850 107931002 -12353310 + RSINE1 SINE B4 3 152 -13 9 1408 283 277 176 28 chr13 107932175 107932357 -12351955 + LTR89 LTR ERVL? 179 387 -492 9 1408 474 65 0 0 chr13 107932803 107932865 -12351447 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 9 1408 975 200 20 5 chr13 107932927 107933123 -12351189 - B3 SINE B2 -2 214 16 9 1408 1709 220 111 0 chr13 107933244 107933666 -12350646 + MT2A LTR ERVL 1 469 -64 9 1408 569 314 101 10 chr13 107934503 107934712 -12349600 - MLT1F2 LTR MaLR -10 550 323 9 1408 369 0 0 0 chr13 107935434 107935475 -12348837 + (TG)n Simple_repeat Simple_repeat 2 42 0 9 1408 356 265 0 0 chr13 107935479 107935547 -12348765 - B3A SINE B2 -42 156 89 9 1408 539 240 8 0 chr13 107935672 107935797 -12348515 - B3 SINE B2 -11 205 80 9 1408 556 139 157 0 chr13 107936342 107936457 -12347855 - MTD LTR MaLR -8 411 279 9 1408 2411 137 19 19 chr13 107936468 107936879 -12347433 - MTC LTR MaLR -3 418 8 9 1408 1058 211 44 16 chr13 107936876 107937126 -12347186 - MTD LTR MaLR -158 261 5 9 1408 430 286 89 66 chr13 107937441 107937510 -12346802 + MLT1D LTR MaLR 12 77 -428 9 1408 1370 134 42 5 chr13 107937510 107937727 -12346585 + URR1B DNA MER1_type 1 225 0 9 1408 430 286 89 66 chr13 107937727 107937870 -12346442 + MLT1D LTR MaLR 78 229 -276 9 1408 240 196 85 75 chr13 107937914 107938008 -12346304 - RMER15 LTR ERVL -59 516 422 9 1408 713 252 116 9 chr13 107938398 107938614 -12345698 + MLT1D LTR MaLR 267 505 0 9 1408 1858 229 3 11 chr13 107938950 107939326 -12344986 + Lx7 LINE L1 7040 7412 -284 9 1408 2007 121 86 17 chr13 107939359 107939720 -12344592 - ORR1B1 LTR MaLR -8 386 1 9 1408 350 273 9 26 chr13 107939722 107939835 -12344477 + Lx7 LINE L1 7558 7668 -28 9 1408 351 0 0 0 chr13 107939980 107940019 -12344293 + (CA)n Simple_repeat Simple_repeat 2 40 0 9 1408 282 281 87 75 chr13 107940254 107940520 -12343792 - L1MC5 LINE L1 -50 7911 7643 9 1408 865 106 40 11 chr13 107943146 107943422 -12340890 + (CA)n Simple_repeat Simple_repeat 1 284 0 9 1408 590 307 54 6 chr13 107943427 107943758 -12340554 - L1MC4 LINE L1 -3841 2374 2028 9 1408 295 286 33 11 chr13 107943760 107943852 -12340460 + L1M3 LINE L1 5450 5543 -628 9 1408 1216 84 6 6 chr13 107944161 107944341 -12339971 + (TTC)n Simple_repeat Simple_repeat 1 180 0 9 1408 250 132 19 19 chr13 107944343 107944397 -12339915 + CT-rich Low_complexity Low_complexity 2 55 0 9 1408 234 0 0 0 chr13 107944406 107944432 -12339880 + (T)n Simple_repeat Simple_repeat 1 26 0 9 1408 692 143 14 63 chr13 107944434 107944576 -12339736 - B1_Mur1 SINE Alu -2 147 13 9 1408 345 324 29 73 chr13 107945402 107945596 -12338716 - MIR SINE MIR -77 191 4 9 1408 278 254 6 5 chr13 107945759 107945854 -12338458 + MIRc SINE MIR 34 135 -141 9 1408 189 228 0 81 chr13 107946156 107946218 -12338094 - MIR SINE MIR -75 187 131 9 1408 655 237 14 7 chr13 107946526 107946666 -12337646 + B1_Mur2 SINE Alu 7 147 -2 9 1408 358 326 186 0 chr13 107948062 107948191 -12336121 + RSINE1 SINE B4 11 163 -2 9 1408 759 174 11 6 chr13 107948203 107948382 -12335930 + (CA)n Simple_repeat Simple_repeat 1 180 0 9 1408 296 119 0 29 chr13 107948387 107948456 -12335856 + (CAGAGA)n Simple_repeat Simple_repeat 4 70 0 9 1408 315 150 0 0 chr13 107949604 107949664 -12334648 + (T)n Simple_repeat Simple_repeat 1 60 0 9 1408 2289 120 38 35 chr13 107949727 107950124 -12334188 - RMER10B LTR ERVL 0 398 1 9 1408 530 254 37 0 chr13 107951337 107951471 -12332841 - ID_B1 SINE B4 -4 220 82 9 1408 306 106 0 0 chr13 107951496 107951543 -12332769 + (TTATA)n Simple_repeat Simple_repeat 4 50 0 9 1408 368 88 18 0 chr13 107951838 107951895 -12332417 + (TG)n Simple_repeat Simple_repeat 1 58 0 9 1408 252 284 0 0 chr13 107951900 107951970 -12332342 - B4A SINE B4 -15 277 208 9 1408 2201 117 87 15 chr13 107951970 107952362 -12331950 - MTC LTR MaLR -1 420 1 9 1408 314 365 82 15 chr13 107952362 107952556 -12331756 - B4A SINE B4 -81 211 5 9 1408 259 258 0 16 chr13 107952581 107952644 -12331668 - PB1D10 SINE Alu -8 109 48 9 1408 1396 234 98 22 chr13 107952864 107953223 -12331089 - Lx6 LINE L1 -26 7434 7049 9 1408 402 352 15 30 chr13 107953282 107953484 -12330828 + MLT1B LTR MaLR 192 390 0 9 1408 189 0 0 0 chr13 107953826 107953847 -12330465 + (TG)n Simple_repeat Simple_repeat 2 22 0 9 1408 240 226 97 0 chr13 107953849 107953911 -12330401 - Tigger9a DNA Tigger -625 107 40 9 1408 478 153 31 0 chr13 107954138 107954228 -12330084 - PB1D9 SINE Alu -8 112 17 9 1408 238 307 56 11 chr13 107954318 107954407 -12329905 + MLT1A LTR MaLR 1 94 -280 9 1408 742 295 48 83 chr13 107954823 107955174 -12329138 + ORR1E LTR MaLR 1 339 -20 9 1408 789 87 69 23 chr13 107955621 107955751 -12328561 - B2_Mm2 SINE B2 -57 138 3 9 1408 1531 33 3 3 chr13 107955764 107956068 -12328244 + (TTCTCC)n Simple_repeat Simple_repeat 1 304 0 1 1408 1169 77 0 0 chr13 107956071 107956214 -12328098 - B1_Mus1 SINE Alu -1 147 5 1 1408 267 89 35 18 chr13 107956242 107956299 -12328013 + (TA)n Simple_repeat Simple_repeat 1 58 0 1 1408 349 229 10 10 chr13 107956827 107956924 -12327388 - MIRc SINE MIR 0 268 172 1 1408 1318 136 51 5 chr13 107957658 107957872 -12326440 - URR1A DNA MER1_type -2 224 1 1 1408 22 0 0 0 chr13 107957963 107957985 -12326327 + AT_rich Low_complexity Low_complexity 1 22 0 1 1408 1253 41 0 0 chr13 107960717 107960864 -12323448 + B1_Mm SINE Alu 1 147 0 1 1408 189 0 0 0 chr13 107960864 107960885 -12323427 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1408 483 144 2 0 chr13 107961269 107961357 -12322955 - MTC LTR MaLR 0 421 330 1 1408 6353 80 9 6 chr13 107961357 107962212 -12322100 - L1Md_F2 LINE L1 0 6582 5725 1 1408 1552 172 41 44 chr13 107962215 107962456 -12321856 - MTC LTR MaLR -82 339 99 1 1408 1492 53 0 26 chr13 107962456 107962650 -12321662 - B2_Mm2 SINE B2 -6 189 1 1 1408 1552 172 41 44 chr13 107962650 107962748 -12321564 - MTC LTR MaLR -323 98 1 1 1408 458 198 0 11 chr13 107963161 107963248 -12321064 + B4 SINE B4 2 87 -205 1 1408 483 58 0 0 chr13 107963248 107963288 -12321024 + (GAA)n Simple_repeat Simple_repeat 2 41 0 1 1408 1329 73 0 0 chr13 107963288 107963466 -12320846 + (GGAGAA)n Simple_repeat Simple_repeat 3 180 0 1 1408 483 58 0 0 chr13 107963466 107963494 -12320818 + (GAA)n Simple_repeat Simple_repeat 3 30 0 1 1408 557 245 54 7 chr13 107963498 107963646 -12320666 + B4 SINE B4 86 240 -52 1 1408 201 94 0 0 chr13 107963661 107963693 -12320619 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1408 701 216 11 7 chr13 107963973 107964256 -12320056 + (CATATA)n Simple_repeat Simple_repeat 1 283 0 1 1408 586 58 11 11 chr13 107965326 107965414 -12318898 + (TTTA)n Simple_repeat Simple_repeat 1 88 0 1 1408 657 254 27 22 chr13 107965424 107965609 -12318703 - B3A SINE B2 -11 187 2 1 1408 309 306 0 0 chr13 107965642 107965714 -12318598 - ID4 SINE ID -10 73 2 1 1408 328 277 39 98 chr13 107965827 107966031 -12318281 - L1MA7 LINE L1 -143 6148 5957 1 1408 420 324 18 0 chr13 107966097 107966236 -12318076 + MIR SINE MIR 2 143 -125 1 1408 685 245 18 6 chr13 107966347 107966511 -12317801 + ID_B1 SINE B4 47 212 -12 1 1408 220 170 56 19 chr13 107966470 107966524 -12317788 + PB1D10 SINE Alu 62 117 0 1 1408 1295 28 11 22 chr13 107966533 107966715 -12317597 + (CAAAC)n Simple_repeat Simple_repeat 1 180 0 1 1408 225 0 0 0 chr13 107968233 107968258 -12316054 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 1408 194 0 39 0 chr13 107969330 107969356 -12314956 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1 1408 515 327 40 54 chr13 107969870 107970093 -12314219 + MLT1A0 LTR MaLR 134 353 -12 1 1408 484 333 36 147 chr13 107970744 107971219 -12313093 - MLT1H2 LTR MaLR -65 424 3 1 1408 536 284 15 0 chr13 107972177 107972311 -12312001 + ID_B1 SINE B4 81 216 -8 1 1408 180 326 133 5 chr13 107972875 107973063 -12311249 - L2 LINE L2 -978 2441 2230 1 1408 2457 42 0 10 chr13 107973776 107974068 -12310244 - L1Md_F2 LINE L1 -198 6384 6096 1 1408 1458 104 5 9 chr13 107974068 107974291 -12310021 + L1Md_F2 LINE L1 6360 6581 -1 1 1408 700 145 14 14 chr13 107974771 107974871 -12309441 + polypyrimidine Low_complexity Low_complexity 43 143 0 1 1408 951 35 0 0 chr13 107974871 107974986 -12309326 + (TCTCC)n Simple_repeat Simple_repeat 5 119 0 1 1408 700 145 14 14 chr13 107974986 107975025 -12309287 + polypyrimidine Low_complexity Low_complexity 4 42 0 1 1408 343 226 0 106 chr13 107975033 107975127 -12309185 - PB1D10 SINE Alu -29 88 5 1 1408 601 234 28 0 chr13 107975315 107975460 -12308852 + ID_B1 SINE B4 2 150 -74 1 1408 343 228 10 98 chr13 107976161 107976263 -12308049 - RMER10B LTR ERVL -32 366 274 1 1408 227 114 0 64 chr13 107976441 107976488 -12307824 + B1F SINE Alu 105 148 -1 1 1408 573 100 0 0 chr13 107976987 107977077 -12307235 + (GA)n Simple_repeat Simple_repeat 1 90 0 1 1408 189 0 0 0 chr13 107977489 107977510 -12306802 + (TG)n Simple_repeat Simple_repeat 2 22 0 1 1408 729 157 5 14 chr13 107978200 107978422 -12305890 + (TCTA)n Simple_repeat Simple_repeat 1 220 0 1 1408 1163 280 15 72 chr13 107978665 107979066 -12305246 - MTE2b LTR MaLR -1 378 1 1 1408 1112 273 50 25 chr13 107979075 107979432 -12304880 - L1MA6 LINE L1 -39 6261 5896 1 1408 612 254 0 0 chr13 107979571 107979693 -12304619 - RSINE1 SINE B4 -40 125 4 1 1408 278 290 64 18 chr13 107979701 107979810 -12304502 - L1MA6 LINE L1 -399 5901 5788 1 1408 603 27 0 0 chr13 107979900 107979973 -12304339 + (TG)n Simple_repeat Simple_repeat 1 73 0 1 1408 378 0 0 0 chr13 107979973 107980014 -12304298 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1408 1475 194 138 0 chr13 107980381 107980721 -12303591 + MTD LTR MaLR 33 419 0 1 1408 770 222 136 12 chr13 107981860 107982102 -12302210 + RMER15 LTR ERVL 301 572 -3 1 1408 615 302 54 23 chr13 107982107 107982368 -12301944 + MLT2B1 LTR ERVL 82 350 -170 1 1408 235 305 0 87 chr13 107982775 107982879 -12301433 - MLT1J1 LTR MaLR -318 126 32 1 1408 479 322 93 51 chr13 107982881 107983192 -12301120 - ORR1E LTR MaLR -14 345 22 1 1408 2247 164 10 47 chr13 107983436 107983845 -12300467 - ORR1B1 LTR MaLR 0 394 1 1 1408 228 321 41 53 chr13 107985199 107985370 -12298942 - L1ME4a LINE L1 -32 6092 5924 1 1408 345 267 34 8 chr13 107985420 107985537 -12298775 - Lx8 LINE L1 -5 7468 7349 1 1408 279 0 0 0 chr13 107985621 107985652 -12298660 + (TG)n Simple_repeat Simple_repeat 1 31 0 1 1408 615 246 109 70 chr13 107986025 107986226 -12298086 - Lx8 LINE L1 -179 7294 7086 1 1408 703 291 52 83 chr13 107986491 107986854 -12297458 - ORR1E LTR MaLR -6 353 2 1 1408 664 249 122 48 chr13 107987156 107987507 -12296805 - L1MA8 LINE L1 0 6291 5915 1 1408 379 303 7 21 chr13 107987599 107987744 -12296568 + MIRb SINE MIR 67 209 -59 1 1408 252 0 0 0 chr13 107988068 107988096 -12296216 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1408 1207 34 0 7 chr13 107988096 107988234 -12296078 - B1_Mus1 SINE Alu -9 139 3 1 1408 207 69 0 0 chr13 107988423 107988452 -12295860 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 1 1408 240 111 0 0 chr13 107989002 107989038 -12295274 + (TCC)n Simple_repeat Simple_repeat 1 36 0 1 1408 725 176 17 6 chr13 107989046 107989223 -12295089 + CT-rich Low_complexity Low_complexity 1 179 0 1 1408 316 40 20 20 chr13 107989571 107989622 -12294690 + (TCTG)n Simple_repeat Simple_repeat 4 54 0 1 1408 2044 168 18 13 chr13 107990027 107990424 -12293888 - MTB_Mm LTR MaLR -8 399 1 1 1408 316 301 146 2 chr13 107990602 107990767 -12293545 - L2a LINE L2 0 3426 3184 1 1408 414 159 0 0 chr13 107990826 107990914 -12293398 + GA-rich Low_complexity Low_complexity 2 89 0 1 1408 380 320 46 7 chr13 107991075 107991226 -12293086 - L2a LINE L2 -571 2848 2692 1 1408 2558 177 0 5 chr13 107992364 107992785 -12291527 - MTC LTR MaLR 0 421 3 1 1408 767 144 0 43 chr13 107994059 107994094 -12290218 + polypyrimidine Low_complexity Low_complexity 146 180 0 1 1408 1458 11 0 16 chr13 107994094 107994277 -12290035 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1408 767 144 0 43 chr13 107994277 107994349 -12289963 + polypyrimidine Low_complexity Low_complexity 77 145 0 1 1408 1376 22 0 22 chr13 107994349 107994533 -12289779 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1 1408 767 144 0 43 chr13 107994533 107994612 -12289700 + polypyrimidine Low_complexity Low_complexity 1 76 0 1 1408 281 189 0 19 chr13 107994612 107994666 -12289646 + CT-rich Low_complexity Low_complexity 2 54 0 1 1408 313 316 0 0 chr13 107995047 107995126 -12289186 - ID4_ SINE ID -2 81 3 1 1408 331 316 0 8 chr13 107995936 107996054 -12288258 + MIR SINE MIR 89 205 -57 1 1408 736 316 102 17 chr13 107996289 107996691 -12287621 + MLT1C LTR MaLR 32 467 0 1 1408 214 240 0 20 chr13 107996943 107996994 -12287318 + CT-rich Low_complexity Low_complexity 3 52 0 1 1408 279 0 0 0 chr13 107997716 107997747 -12286565 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 1 1408 216 0 0 0 chr13 107998643 107998667 -12285645 + (GA)n Simple_repeat Simple_repeat 2 25 0 1 1408 666 0 0 0 chr13 108000051 108000125 -12284187 + (GA)n Simple_repeat Simple_repeat 2 75 0 1 1408 852 292 141 34 chr13 108000141 108000673 -12283639 + HAL1 LINE L1 1290 1878 -629 2 1408 235 325 17 17 chr13 108000774 108000890 -12283422 - MLT1E2 LTR MaLR -8 619 504 3 1408 1289 162 25 8 chr13 108001002 108001245 -12283067 - Lx4B LINE L1 -4 7054 6808 4 1408 2080 138 14 17 chr13 108002554 108002914 -12281398 + ORR1B2 LTR MaLR 9 367 0 5 21 239 368 33 49 chr13 108003192 108003341 -12280971 - L1M5 LINE L1 -502 5671 5525 6 1409 1458 138 4 18 chr13 108003341 108003569 -12280743 - URR1B DNA MER1_type 0 225 1 7 1409 239 368 33 49 chr13 108003569 108003602 -12280710 - L1M5 LINE L1 -649 5524 5492 6 1409 329 177 13 0 chr13 108004037 108004116 -12280196 + (TA)n Simple_repeat Simple_repeat 2 81 0 8 1409 384 267 0 0 chr13 108004336 108004426 -12279886 - PB1D10 SINE Alu -6 111 22 9 1409 2896 92 27 2 chr13 108004475 108004887 -12279425 - Lx LINE L1 -10 6644 6223 1 1409 621 40 0 0 chr13 108005039 108005115 -12279197 + (TC)n Simple_repeat Simple_repeat 2 77 0 1 1409 1223 34 0 14 chr13 108005138 108005286 -12279026 - B1_Mus2 SINE Alu -1 146 1 1 1409 718 247 30 6 chr13 108005307 108005474 -12278838 - Lx8 LINE L1 -134 7339 7169 1 1409 307 260 0 99 chr13 108005960 108006071 -12278241 - PB1D10 SINE Alu -13 104 5 1 1409 1014 267 46 18 chr13 108007089 108007417 -12276895 - MLT1A0 LTR MaLR -28 337 1 1 1409 291 264 126 0 chr13 108008976 108009063 -12275249 - MLT1I LTR MaLR -6 405 308 1 1409 240 35 0 0 chr13 108011121 108011150 -12273162 + (TATG)n Simple_repeat Simple_repeat 4 32 0 1 1409 389 386 8 0 chr13 108011190 108011317 -12272995 - B3A SINE B2 -65 133 6 1 1409 502 241 70 33 chr13 108011366 108011546 -12272766 - B3 SINE B2 -6 189 8 1 1409 438 20 0 0 chr13 108011567 108011618 -12272694 + (GGA)n Simple_repeat Simple_repeat 2 52 0 2 1409 360 148 0 0 chr13 108011627 108011688 -12272624 + (CAA)n Simple_repeat Simple_repeat 1 61 0 2 1409 452 266 26 0 chr13 108011914 108012018 -12272294 + MTE-int LTR MaLR 1421 1527 -53 2 1409 552 281 44 74 chr13 108012018 108012407 -12271905 + ORR1E LTR MaLR 1 370 0 2 1409 296 227 15 0 chr13 108012911 108012977 -12271335 - ID_B1 SINE B4 -56 168 102 2 1409 333 0 0 0 chr13 108014302 108014339 -12269973 + (TG)n Simple_repeat Simple_repeat 2 38 0 2 1409 284 293 25 33 chr13 108014582 108014702 -12269610 - MER103 DNA DNA -45 121 3 2 1409 22 0 0 0 chr13 108015236 108015258 -12269054 + AT_rich Low_complexity Low_complexity 1 22 0 2 1409 261 0 0 0 chr13 108015260 108015289 -12269023 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1409 1225 42 0 0 chr13 108015977 108016121 -12268191 - B1_Mus1 SINE Alu 0 148 5 2 1409 1293 129 114 0 chr13 108017436 108017638 -12266674 + URR1B DNA MER1_type 1 225 0 3 1409 291 286 0 0 chr13 108018022 108018092 -12266220 - RMER30 DNA MER1_type 0 202 133 3 1409 250 310 28 0 chr13 108018029 108018100 -12266212 + Charlie12 DNA MER1_type 7 79 -2794 3 1409 427 274 41 7 chr13 108018413 108018560 -12265752 + Tigger5 DNA MER2_type 2165 2316 -90 3 1409 228 301 96 0 chr13 108019201 108019274 -12265038 - L2b LINE L2 -24 3351 3272 3 1409 2726 230 80 12 chr13 108020087 108020851 -12263461 + RCHARR1 DNA MER1_type 129 944 -30 3 1409 2828 69 49 8 chr13 108021198 108021416 -12262896 - ORR1A1-int LTR MaLR -1366 426 168 3 1409 1177 93 0 6 chr13 108021416 108021588 -12262724 + L1Md_F2 LINE L1 6405 6575 -7 3 1409 2828 47 42 47 chr13 108021588 108021976 -12262336 - ORR1A1-int LTR MaLR -1398 394 1 3 1409 2313 44 62 12 chr13 108021976 108022298 -12262014 - ORR1A1 LTR MaLR -8 338 1 3 1409 240 313 52 9 chr13 108022298 108022410 -12261902 + Arthur1A DNA Tip100 61 177 0 3 1409 537 77 3 16 chr13 108022561 108022653 -12261659 + B1_Mur4 SINE Alu 33 149 -1 3 1409 184 72 0 67 chr13 108022662 108022707 -12261605 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 4 1409 585 90 0 0 chr13 108022805 108022894 -12261418 + (CA)n Simple_repeat Simple_repeat 2 90 0 4 1409 1217 48 0 7 chr13 108023165 108023312 -12261000 - B1_Mm SINE Alu 0 147 2 4 1409 1456 290 129 44 chr13 108023317 108024242 -12260070 - L1MC4 LINE L1 -404 7638 6636 4 1409 442 345 70 64 chr13 108024947 108025260 -12259052 + LTR33A LTR ERVL 198 512 -8 4 1409 367 296 66 22 chr13 108025300 108025483 -12258829 + MLT1K LTR MaLR 332 522 -73 4 1409 272 314 78 0 chr13 108027164 108027266 -12257046 - PB1D10 SINE Alu -7 110 1 4 1409 1728 124 28 25 chr13 108027453 108027775 -12256537 - ORR1A4 LTR MaLR -4 325 3 4 1409 1188 282 49 35 chr13 108028544 108029077 -12255235 + LTR80B LTR ERVL 32 575 -9 4 1409 1814 207 28 6 chr13 108029977 108030341 -12253971 + ORR1D1 LTR MaLR 3 374 0 4 1409 885 147 176 10 chr13 108030728 108030921 -12253391 - URR1B DNA MER1_type 0 225 1 5 1409 2548 49 0 3 chr13 108031195 108031505 -12252807 - L1_Mus1 LINE L1 0 6567 6259 5 1409 888 133 0 0 chr13 108031537 108031680 -12252632 + (TTC)n Simple_repeat Simple_repeat 1 143 0 5 1409 338 176 0 26 chr13 108031799 108031875 -12252437 + CT-rich Low_complexity Low_complexity 3 76 0 5 1409 234 174 0 0 chr13 108032186 108032232 -12252080 + (ATG)n Simple_repeat Simple_repeat 3 48 0 5 1409 315 273 86 32 chr13 108032777 108032989 -12251323 + L1M7 LINE L1 1399 1582 -4661 5 1409 245 300 93 70 chr13 108033418 108033590 -12250722 - ORR1E LTR MaLR -165 194 19 5 1409 756 299 98 35 chr13 108034086 108034565 -12249747 + MER34A1 LTR ERV1 25 583 -4 5 1409 387 103 38 25 chr13 108034758 108034838 -12249474 + Lx3_Mus LINE L1 6929 7009 0 5 1409 242 279 164 90 chr13 108034942 108035076 -12249236 + MER20 DNA MER1_type 2 145 -74 5 1409 1599 182 141 13 chr13 108035815 108036204 -12248108 + RMER10A LTR ERVL 3 441 -1 6 1409 222 128 0 0 chr13 108037425 108037464 -12246848 + (CGAG)n Simple_repeat Simple_repeat 2 40 0 6 1409 351 0 0 0 chr13 108037467 108037506 -12246806 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1409 276 30 0 0 chr13 108037506 108037538 -12246774 + (GA)n Simple_repeat Simple_repeat 1 33 0 6 1409 186 103 0 0 chr13 108037828 108037857 -12246455 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 6 1409 227 18 16 127 chr13 108037879 108037942 -12246370 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 6 1409 189 0 0 0 chr13 108038253 108038274 -12246038 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1409 336 302 9 9 chr13 108038737 108038844 -12245468 - RMER10B LTR ERVL -23 375 269 6 1409 276 30 0 0 chr13 108039357 108039390 -12244922 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 6 1409 198 0 0 0 chr13 108039419 108039441 -12244871 + (T)n Simple_repeat Simple_repeat 1 22 0 6 1409 195 173 0 0 chr13 108041218 108041270 -12243042 + CT-rich Low_complexity Low_complexity 2 53 0 7 1409 886 152 39 94 chr13 108042185 108042388 -12241924 + B2_Mm2 SINE B2 2 193 -2 7 1409 207 290 37 74 chr13 108044190 108044298 -12240014 + MIR SINE MIR 123 226 -36 7 1409 249 57 0 0 chr13 108044538 108044573 -12239739 + (TTTG)n Simple_repeat Simple_repeat 1 35 0 7 1409 1033 118 5 150 chr13 108044777 108044997 -12239315 + B2_Mm2 SINE B2 1 188 -7 7 1409 236 282 62 46 chr13 108048275 108048405 -12235907 + MLT1N2 LTR MaLR 374 505 -57 7 1409 312 228 24 0 chr13 108048995 108049095 -12235217 + (TG)n Simple_repeat Simple_repeat 2 103 0 7 1409 432 0 0 0 chr13 108049095 108049143 -12235169 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1409 312 228 24 0 chr13 108049143 108049169 -12235143 + (TG)n Simple_repeat Simple_repeat 1 27 0 7 1409 685 292 19 19 chr13 108049333 108049549 -12234763 - B3 SINE B2 0 216 1 7 1409 376 346 65 0 chr13 108049567 108049720 -12234592 - MER63A DNA AcHobo -40 170 8 8 1409 349 247 24 156 chr13 108050117 108050405 -12233907 + L1MEc LINE L1 2080 2329 -4071 8 1409 494 280 13 7 chr13 108050417 108050568 -12233744 - MER3 DNA MER1_type -56 153 2 8 1409 2307 75 24 59 chr13 108052581 108052920 -12231392 - ORR1A2 LTR MaLR 0 327 1 8 1409 340 325 17 42 chr13 108053062 108053181 -12231131 + PB1D10 SINE Alu 2 117 0 8 1409 239 233 23 151 chr13 108053674 108053760 -12230552 - ID2 SINE ID -8 75 1 8 1409 505 217 47 0 chr13 108054752 108054858 -12229454 - PB1D7 SINE Alu -7 113 3 8 1409 369 0 0 0 chr13 108055874 108055915 -12228397 + (TG)n Simple_repeat Simple_repeat 2 42 0 8 1409 252 317 24 48 chr13 108055969 108056095 -12228217 - MER5A DNA MER1_type -1 188 66 8 1409 201 129 0 0 chr13 108057387 108057418 -12226894 + (CCCG)n Simple_repeat Simple_repeat 3 33 0 8 1409 507 317 70 47 chr13 108058313 108058657 -12225655 + HAL1 LINE L1 926 1277 -1230 9 1409 396 152 0 95 chr13 108058725 108058841 -12225471 + Lx9 LINE L1 7413 7517 -127 9 1409 196 100 50 0 chr13 108058841 108058881 -12225431 + (TA)n Simple_repeat Simple_repeat 1 42 0 9 1409 1632 265 41 79 chr13 108058896 108059013 -12225299 + RLTR20A2 LTR ERVK 19 144 -434 9 1409 969 41 0 0 chr13 108059013 108059135 -12225177 + (GGGAGA)n Simple_repeat Simple_repeat 6 127 0 9 1409 1632 265 41 79 chr13 108059135 108059599 -12224713 + RLTR20A2 LTR ERVK 145 577 -1 9 1409 361 213 97 34 chr13 108059603 108059778 -12224534 + Lx9 LINE L1 7458 7643 -1 9 1409 186 118 0 0 chr13 108059828 108059862 -12224450 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 9 1409 1920 227 183 51 chr13 108060020 108060429 -12223883 + L1_Mur3 LINE L1 541 1006 -6722 9 1409 435 19 0 0 chr13 108060429 108060481 -12223831 + (CA)n Simple_repeat Simple_repeat 1 52 0 9 1409 3419 179 74 69 chr13 108060481 108060909 -12223403 + L1_Mur3 LINE L1 1007 1435 -4445 9 1409 180 0 0 0 chr13 108060909 108060929 -12223383 + (CCAA)n Simple_repeat Simple_repeat 1 20 0 9 1409 3419 151 11 80 chr13 108060929 108061446 -12222866 + L1_Mur3 LINE L1 1436 1938 -3942 9 1409 717 179 76 72 chr13 108061448 108061671 -12222641 + Lx7 LINE L1 7473 7696 0 1 1409 1379 65 16 41 chr13 108061725 108061886 -12222426 + B2_Mm1t SINE B2 1 160 -33 1 1409 387 0 0 0 chr13 108061886 108061929 -12222383 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 1 1409 1379 65 16 41 chr13 108061929 108061961 -12222351 + B2_Mm1t SINE B2 161 189 -4 1 1409 652 285 102 53 chr13 108062082 108062648 -12221664 + HAL1 LINE L1 1432 2025 -482 9 1409 222 118 0 0 chr13 108062709 108062743 -12221569 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1409 651 269 17 86 chr13 108062839 108062900 -12221412 - RSINE1 SINE B4 0 165 115 1 1409 2999 65 42 0 chr13 108062900 108063284 -12221028 + MTB LTR MaLR 1 400 0 1 1409 7004 106 11 73 chr13 108063284 108064455 -12219857 + MTB-int LTR MaLR 1 1098 0 1 1409 2999 70 31 0 chr13 108064455 108064843 -12219469 + MTB LTR MaLR 1 400 0 1 1409 651 269 17 86 chr13 108064843 108064954 -12219358 - RSINE1 SINE B4 -51 114 5 1 1409 183 271 0 0 chr13 108066305 108066375 -12217937 + GA-rich Low_complexity Low_complexity 2 71 0 1 1409 355 339 118 34 chr13 108066489 108066810 -12217502 + MLT1J-int LTR MaLR 990 1337 -50 1 1409 21 0 0 0 chr13 108068150 108068171 -12216141 + AT_rich Low_complexity Low_complexity 1 21 0 1 1409 21 57 0 0 chr13 108071371 108071406 -12212906 + AT_rich Low_complexity Low_complexity 1 35 0 1 1409 967 165 114 0 chr13 108071942 108072118 -12212194 - B3A SINE B2 -1 197 2 1 1409 250 309 128 48 chr13 108072191 108072378 -12211934 - ORR1E LTR MaLR -105 254 53 1 1409 1040 285 26 80 chr13 108073913 108074336 -12209976 - Lx8 LINE L1 0 7473 7074 1 1409 1020 280 71 29 chr13 108074516 108074964 -12209348 + L1MA4A LINE L1 5464 5930 -373 1 1409 270 0 0 0 chr13 108074979 108075009 -12209303 + (CA)n Simple_repeat Simple_repeat 2 31 0 1 1409 30 27 0 0 chr13 108075329 108075366 -12208946 + AT_rich Low_complexity Low_complexity 1 37 0 1 1409 267 157 14 28 chr13 108075436 108075508 -12208804 + CT-rich Low_complexity Low_complexity 2 72 0 1 1409 1235 27 0 7 chr13 108075510 108075657 -12208655 - B1_Mm SINE Alu 0 147 2 1 1409 756 225 5 88 chr13 108075846 108076061 -12208251 - B3A SINE B2 -1 197 1 1 1409 387 0 0 0 chr13 108076253 108076296 -12208016 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1409 300 341 76 59 chr13 108077398 108077635 -12206677 - MER102b DNA MER1_type -2 339 99 1 1409 185 65 32 0 chr13 108077856 108077887 -12206425 + (TGGG)n Simple_repeat Simple_repeat 1 32 0 1 1409 582 104 0 0 chr13 108078935 108079031 -12205281 + (TC)n Simple_repeat Simple_repeat 2 97 0 1 1409 242 197 35 116 chr13 108079037 108079123 -12205189 - B4A SINE B4 -4 288 210 1 1409 960 169 0 0 chr13 108079223 108079401 -12204911 + CT-rich Low_complexity Low_complexity 3 180 0 1 1409 208 222 0 27 chr13 108079416 108079490 -12204822 + CT-rich Low_complexity Low_complexity 3 74 0 1 1409 266 194 145 0 chr13 108079500 108079562 -12204750 - B4A SINE B4 -220 72 2 1 1409 322 270 14 0 chr13 108079720 108079794 -12204518 - PB1D10 SINE Alu -42 75 1 1 1409 1397 214 54 63 chr13 108081793 108082237 -12202075 + RMER10A LTR ERVL 1 440 -2 1 1409 573 250 72 242 chr13 108082245 108082512 -12201800 + ORR1E LTR MaLR 1 197 -162 1 1409 612 40 0 0 chr13 108082512 108082587 -12201725 + (TG)n Simple_repeat Simple_repeat 1 75 0 1 1409 573 250 72 242 chr13 108082587 108082752 -12201560 + ORR1E LTR MaLR 198 359 0 1 1409 1833 167 53 71 chr13 108082830 108083210 -12201102 + ORR1C1 LTR MaLR 3 375 -3 1 1409 320 263 30 10 chr13 108083679 108083779 -12200533 + MTE2a LTR MaLR 278 379 0 1 1409 282 102 0 25 chr13 108083995 108084055 -12200257 - MT2A LTR ERVL 0 567 482 1 1409 22 35 0 0 chr13 108084117 108084146 -12200166 + AT_rich Low_complexity Low_complexity 1 29 0 1 1409 2016 243 15 9 chr13 108084146 108084603 -12199709 - MT2A LTR ERVL -73 460 1 1 1409 714 243 211 31 chr13 108084695 108084984 -12199328 - MLT1B LTR MaLR -19 371 31 1 1409 180 0 0 0 chr13 108085392 108085412 -12198900 + (TTTCC)n Simple_repeat Simple_repeat 2 21 0 1 1409 251 308 108 34 chr13 108086634 108086782 -12197530 + MamRep38 DNA hAT 35 193 -102 1 1409 2222 115 12 0 chr13 108086851 108087172 -12197140 - ORR1A2 LTR MaLR 0 327 3 1 1409 764 231 54 0 chr13 108087301 108087318 -12196994 - B3A SINE B2 0 198 182 1 1409 252 0 0 0 chr13 108087318 108087346 -12196966 + (TG)n Simple_repeat Simple_repeat 1 28 0 1 1409 764 231 54 0 chr13 108087346 108087514 -12196798 - B3A SINE B2 -17 181 4 1 1409 414 108 0 0 chr13 108087947 108088012 -12196300 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1409 1410 95 31 97 chr13 108088159 108088449 -12195863 + ORR1A4 LTR MaLR 1 271 -58 1 1409 1630 244 51 23 chr13 108088544 108089031 -12195281 + RMER5 LTR ERV1 33 533 -1 1 1409 267 346 68 23 chr13 108090421 108090554 -12193758 + MER5A DNA MER1_type 27 165 -24 1 1409 257 75 25 0 chr13 108091579 108091619 -12192693 + (TC)n Simple_repeat Simple_repeat 1 41 0 1 1409 501 238 0 10 chr13 108093168 108093270 -12191042 + RSINE1 SINE B4 3 103 -62 1 1409 189 278 97 53 chr13 108096853 108096967 -12187345 + MIR3 SINE MIR 82 200 -8 1 1409 541 302 33 8 chr13 108097237 108097477 -12186835 + L1MA4 LINE L1 5662 5907 -393 1 1409 296 280 94 0 chr13 108097477 108097558 -12186754 - PB1D9 SINE Alu -50 100 9 1 1409 573 230 70 51 chr13 108098021 108098177 -12186135 + RSINE1 SINE B4 3 161 -4 1 1409 501 17 0 0 chr13 108098184 108098242 -12186070 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1409 234 125 0 0 chr13 108098242 108098289 -12186023 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1409 375 23 0 0 chr13 108098289 108098332 -12185980 + (GA)n Simple_repeat Simple_repeat 2 45 0 1 1409 376 143 14 54 chr13 108098332 108098406 -12185906 + PB1D10 SINE Alu 46 116 -1 1 1409 252 0 0 0 chr13 108099609 108099637 -12184675 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 1 1409 498 33 0 0 chr13 108099704 108099764 -12184548 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1409 409 311 96 9 chr13 108101340 108101570 -12182742 - MER33 DNA MER1_type -55 269 20 1 1409 440 18 0 17 chr13 108102262 108102320 -12181992 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1409 948 293 27 0 chr13 108102347 108102603 -12181709 - B4A SINE B4 -12 280 18 1 1409 243 0 0 0 chr13 108103618 108103645 -12180667 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1409 223 226 161 0 chr13 108103803 108103865 -12180447 + B1F SINE Alu 67 138 -11 1 1409 477 50 0 0 chr13 108103872 108103932 -12180380 + (CCA)n Simple_repeat Simple_repeat 1 60 0 1 1409 207 0 0 0 chr13 108104376 108104399 -12179913 + (TTC)n Simple_repeat Simple_repeat 2 24 0 1 1409 1031 300 7 10 chr13 108105352 108105642 -12178670 - B4A SINE B4 -2 290 2 1 1409 180 179 0 0 chr13 108105678 108105717 -12178595 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1409 463 172 10 48 chr13 108105728 108105832 -12178480 + RMER30 DNA MER1_type 102 201 -1 1 1409 1014 234 9 0 chr13 108105862 108106076 -12178236 - B3 SINE B2 0 216 1 1 1409 965 131 0 0 chr13 108106301 108106454 -12177858 + B2_Mm2 SINE B2 1 153 -42 1 1409 216 0 0 0 chr13 108106457 108106481 -12177831 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 1 1409 576 77 0 0 chr13 108107298 108107376 -12176936 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 1 1409 294 253 23 11 chr13 108107416 108107504 -12176808 + PB1D10 SINE Alu 2 90 -27 1 1409 442 301 30 25 chr13 108111035 108111236 -12173076 + L3 LINE CR1 2111 2312 -2177 1 1409 21 0 0 0 chr13 108111284 108111305 -12173007 + AT_rich Low_complexity Low_complexity 1 21 0 1 1409 2548 64 15 3 chr13 108112799 108113126 -12171186 + IAPEY_LTR LTR ERVK 55 385 0 1 1409 232 203 34 0 chr13 108113197 108113256 -12171056 - L1M3 LINE L1 -1745 4395 4335 1 1409 371 246 8 8 chr13 108113246 108113365 -12170947 - Lx9 LINE L1 -9 7635 7517 1 1409 402 21 0 0 chr13 108113365 108113412 -12170900 + (CA)n Simple_repeat Simple_repeat 1 47 0 1 1409 2053 217 95 12 chr13 108113413 108113907 -12170405 - Lx9 LINE L1 -195 7449 6915 1 1409 188 235 0 0 chr13 108114022 108114056 -12170256 + MIRb SINE MIR 121 154 -114 1 1409 2770 192 33 127 chr13 108114629 108115304 -12169008 + RMER19C LTR ERVK 1 611 0 1 1409 208 77 51 0 chr13 108115583 108115622 -12168690 + (TC)n Simple_repeat Simple_repeat 2 42 0 1 1409 510 17 0 0 chr13 108115622 108115681 -12168631 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 1 1409 209 331 95 11 chr13 108116979 108117136 -12167176 + MIRc SINE MIR 1 166 -42 1 1409 210 304 38 29 chr13 108117510 108117615 -12166697 - L2 LINE L2 -1404 2015 1910 1 1409 405 0 0 0 chr13 108118007 108118052 -12166260 + (GA)n Simple_repeat Simple_repeat 2 46 0 1 1409 770 282 161 14 chr13 108118080 108118371 -12165941 + MER2 DNA MER2_type 6 339 -6 1 1409 28 0 0 0 chr13 108119999 108120027 -12164285 + AT_rich Low_complexity Low_complexity 1 28 0 1 1409 192 40 0 0 chr13 108120297 108120322 -12163990 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1409 5222 150 38 26 chr13 108120342 108121233 -12163079 + RMER19B LTR ERVK 1 902 0 1 1409 704 350 90 19 chr13 108121280 108121548 -12162764 + B4A SINE B4 6 292 0 1 1409 516 317 81 21 chr13 108121751 108121986 -12162326 + LFSINE_Vert SINE SINE 29 277 -182 1 1409 243 0 0 0 chr13 108122492 108122519 -12161793 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1409 191 214 0 67 chr13 108122845 108122890 -12161422 - L4 LINE RTE -1007 1022 981 1 1409 1465 287 86 6 chr13 108123352 108123829 -12160483 - MLT2B2 LTR ERVL 0 515 1 1 1409 242 271 0 78 chr13 108124761 108124786 -12159526 + RSINE1 SINE B4 4 28 -137 1 1409 4638 36 0 0 chr13 108124786 108125289 -12159023 + RLTR1C LTR ERV1 1 503 0 1 1409 242 271 0 78 chr13 108125289 108125327 -12158985 + RSINE1 SINE B4 29 62 -103 1 1409 1877 123 76 3 chr13 108125341 108125642 -12158670 - MTC LTR MaLR 0 421 99 1 1409 235 274 43 114 chr13 108125532 108125672 -12158640 - MT2A LTR ERVL -359 174 45 1 1409 706 100 9 35 chr13 108126073 108126187 -12158125 - MTC LTR MaLR -310 111 1 1 1409 357 24 0 0 chr13 108126239 108126281 -12158031 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1409 208 152 43 21 chr13 108127579 108127626 -12156686 + L3b LINE CR1 249 296 -186 1 1409 299 327 12 61 chr13 108130354 108130517 -12153795 + L1ME4a LINE L1 5753 5907 -217 1 1409 216 0 0 0 chr13 108130846 108130870 -12153442 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2 1409 213 121 0 0 chr13 108132374 108132407 -12151905 + (TAA)n Simple_repeat Simple_repeat 2 34 0 2 176 244 229 0 0 chr13 108134384 108134432 -12149880 + (TATATG)n Simple_repeat Simple_repeat 4 51 0 2 1410 192 152 0 0 chr13 108134458 108134491 -12149821 + CT-rich Low_complexity Low_complexity 1 33 0 2 1410 668 259 120 15 chr13 108134491 108134691 -12149621 - ID_B1 SINE B4 -3 221 1 2 1410 371 270 83 51 chr13 108134711 108134867 -12149445 - L1MA4 LINE L1 -411 5889 5729 2 1410 390 252 252 34 chr13 108134866 108135396 -12148916 - L1MEg LINE L1 -4045 2039 1393 2 1410 21 0 0 0 chr13 108135501 108135522 -12148790 + AT_rich Low_complexity Low_complexity 1 21 0 2 1410 919 242 10 35 chr13 108135530 108135731 -12148581 - B3A SINE B2 0 198 3 2 1410 397 294 28 0 chr13 108135745 108135854 -12148458 - PB1D7 SINE Alu 0 120 9 2 1410 321 322 177 20 chr13 108135874 108136077 -12148235 - LTR33A_ LTR ERVL -296 235 1 2 1410 24 32 0 0 chr13 108136209 108136240 -12148072 + AT_rich Low_complexity Low_complexity 1 31 0 2 1410 234 0 0 0 chr13 108136781 108136807 -12147505 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2 1410 1284 48 7 0 chr13 108136816 108136963 -12147349 - B1_Mus1 SINE Alu 0 148 1 2 1410 675 0 0 0 chr13 108138108 108138183 -12146129 + (GA)n Simple_repeat Simple_repeat 2 76 0 2 1410 35438 72 5 7 chr13 108138655 108144154 -12140158 - L1Md_F2 LINE L1 -6 6576 1091 2 1410 40170 28 2 6 chr13 108144155 108150329 -12133983 - L1Md_T LINE L1 -1 6581 441 2 1410 3998 58 60 0 chr13 108150327 108150845 -12133467 - L1Md_F LINE L1 -5491 1028 480 2 1410 959 271 8 38 chr13 108153828 108154093 -12130219 + Lx8 LINE L1 6989 7245 -228 2 1410 306 209 63 127 chr13 108154094 108154220 -12130092 - RLTR42 LTR ERVK 0 239 122 2 1410 289 156 0 0 chr13 108154341 108154386 -12129926 - MLT1J LTR MaLR -368 144 100 2 1410 301 137 20 0 chr13 108154347 108154398 -12129914 - RLTR42 LTR ERVK -183 56 5 2 1410 374 272 109 7 chr13 108154408 108154545 -12129767 + Lx8 LINE L1 7250 7400 -73 2 1410 434 128 0 11 chr13 108154568 108154663 -12129649 + (GA)n Simple_repeat Simple_repeat 1 94 0 2 1410 397 250 25 17 chr13 108154698 108154816 -12129496 + Lx8 LINE L1 7353 7471 -2 2 1410 356 284 99 20 chr13 108155827 108155978 -12128334 + MIRb SINE MIR 75 237 -31 2 1410 832 288 78 25 chr13 108156033 108156314 -12127998 - MLT2D LTR ERVL -107 307 12 2 1410 1462 251 122 7 chr13 108156322 108156779 -12127533 + RMER5 LTR ERV1 23 532 -2 2 1410 1055 71 2 3 chr13 108157421 108157572 -12126740 - B1_Mus1 SINE Alu 0 149 1 2 1410 396 0 0 0 chr13 108158033 108158077 -12126235 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1410 264 59 0 0 chr13 108158081 108158115 -12126197 + (CA)n Simple_repeat Simple_repeat 1 34 0 2 1410 274 323 47 45 chr13 108158176 108158340 -12125972 + MLT1J2 LTR MaLR 69 221 -227 2 1410 1080 224 139 37 chr13 108158457 108158781 -12125531 - ORR1E LTR MaLR 0 359 3 2 1410 6192 106 29 30 chr13 108160435 108161368 -12122944 + Lx3C LINE L1 6045 6976 0 2 1410 39 0 0 0 chr13 108163809 108163848 -12120464 + AT_rich Low_complexity Low_complexity 1 39 0 2 1410 3794 112 25 4 chr13 108163848 108164376 -12119936 - Lx4A LINE L1 -2 7056 6518 2 1410 387 221 15 0 chr13 108164949 108165017 -12119295 - MER91A DNA Tip100 -111 85 17 2 1410 1088 89 6 0 chr13 108165103 108165261 -12119051 + (TTC)n Simple_repeat Simple_repeat 1 159 0 2 1410 284 296 89 47 chr13 108165579 108165792 -12118520 + MIRc SINE MIR 26 247 -21 2 1410 255 293 0 51 chr13 108166693 108166772 -12117540 + Lx8 LINE L1 7155 7229 -244 2 1410 272 296 29 39 chr13 108166773 108166875 -12117437 + RMER15 LTR ERVL 371 471 -104 2 1410 258 348 24 55 chr13 108166976 108167181 -12117131 + MIRm SINE MIR 44 245 -23 2 1410 1398 130 0 27 chr13 108167196 108167418 -12116894 - URR1B DNA MER1_type -9 216 1 2 1410 224 337 23 0 chr13 108167423 108167509 -12116803 + MIRb SINE MIR 114 201 -67 2 1410 36 40 0 0 chr13 108167879 108167929 -12116383 + AT_rich Low_complexity Low_complexity 1 50 0 2 1410 340 186 265 0 chr13 108168318 108168420 -12115892 + B3 SINE B2 8 136 -80 2 1410 330 26 0 0 chr13 108168444 108168483 -12115829 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 2 1410 602 26 13 0 chr13 108168582 108168658 -12115654 + (TCTA)n Simple_repeat Simple_repeat 3 79 0 2 1410 334 302 24 32 chr13 108168818 108168941 -12115371 + L1MEc LINE L1 83 204 -6196 2 1410 328 237 36 92 chr13 108169620 108169815 -12114497 + L1MEc LINE L1 1276 1459 -4941 2 1410 413 218 60 71 chr13 108170290 108170543 -12113769 + L1MEc LINE L1 1453 1748 -4667 2 1410 227 319 66 15 chr13 108170670 108170807 -12113505 + L1MEc LINE L1 1985 2128 -4272 2 1410 732 134 0 34 chr13 108171019 108171196 -12113116 + (TA)n Simple_repeat Simple_repeat 1 171 0 2 1410 510 365 118 24 chr13 108171523 108171896 -12112416 + LTR16A LTR ERVL 41 448 -3 2 1410 915 259 125 23 chr13 108172559 108173002 -12111310 - L1MD3 LINE L1 -31 7964 7263 2 1410 1763 242 57 19 chr13 108173174 108173609 -12110703 + RLTR20B3 LTR ERVK 31 475 -102 2 1410 366 23 0 0 chr13 108173609 108173652 -12110660 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1410 1763 242 57 19 chr13 108173652 108173729 -12110583 + RLTR20B3 LTR ERVK 476 561 -16 2 1410 794 303 64 39 chr13 108173929 108174523 -12109789 - L1MD3 LINE L1 -1002 6880 6272 2 1410 484 344 80 78 chr13 108176498 108176907 -12107405 + MLT2B3 LTR ERVL 1 396 -119 2 1410 353 245 32 0 chr13 108176979 108177073 -12107239 + Lx7 LINE L1 6093 6189 -1507 2 1410 235 250 0 0 chr13 108177073 108177125 -12107187 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 2 1410 3096 271 96 29 chr13 108177125 108178225 -12106087 + Lx8 LINE L1 6173 7351 -122 2 1410 285 29 0 0 chr13 108178225 108178259 -12106053 + (CAGA)n Simple_repeat Simple_repeat 1 34 0 2 1410 3096 271 96 29 chr13 108178259 108178376 -12105936 + Lx8 LINE L1 7352 7472 -1 2 1410 258 32 0 0 chr13 108178398 108178429 -12105883 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1410 473 281 20 33 chr13 108178594 108178745 -12105567 + B1F SINE Alu 1 149 0 2 1410 2067 183 14 8 chr13 108180388 108180751 -12103561 - Lx5 LINE L1 0 7050 6686 2 1410 3166 148 34 111 chr13 108180753 108181020 -12103292 + L1_Mur2 LINE L1 5127 5316 -561 2 1410 1846 220 17 3 chr13 108181020 108181376 -12102936 - Lx5 LINE L1 -6 7044 6684 2 1410 3166 148 34 111 chr13 108181376 108181847 -12102465 + L1_Mur2 LINE L1 5317 5808 -69 2 1410 253 292 91 8 chr13 108181891 108182012 -12102300 + MIR SINE MIR 64 194 -68 2 1410 278 286 82 1 chr13 108182496 108182616 -12101696 + L1MC3 LINE L1 6772 6911 -1131 2 1410 267 194 29 0 chr13 108182618 108182721 -12101591 + (TA)n Simple_repeat Simple_repeat 1 106 0 2 1410 29 60 0 0 chr13 108182721 108182771 -12101541 + AT_rich Low_complexity Low_complexity 1 50 0 2 1410 195 226 15 8 chr13 108182771 108182905 -12101407 + (TA)n Simple_repeat Simple_repeat 1 135 0 2 1410 453 268 236 25 chr13 108182918 108183557 -12100755 + L1MC3 LINE L1 6870 7643 -142 2 1410 200 176 0 0 chr13 108184952 108184986 -12099326 + CT-rich Low_complexity Low_complexity 3 36 0 2 1410 406 94 0 0 chr13 108185210 108185263 -12099049 + ORR1D1 LTR MaLR 30 82 -292 2 1410 369 173 13 0 chr13 108185260 108185335 -12098977 - ORR1D1 LTR MaLR -241 133 58 2 1410 1491 199 14 58 chr13 108185332 108185626 -12098686 + ORR1D1 LTR MaLR 86 366 -8 2 1410 5913 211 49 12 chr13 108185630 108186951 -12097361 + ORR1D1-int LTR MaLR 1 1370 0 2 1410 685 126 2 12 chr13 108186951 108187061 -12097251 + ORR1D1 LTR MaLR 1 101 -293 2 1410 30 59 0 0 chr13 108187130 108187181 -12097131 + AT_rich Low_complexity Low_complexity 1 51 0 2 1410 656 291 61 22 chr13 108187379 108187656 -12096656 - B4A SINE B4 0 292 5 2 1410 22 35 0 0 chr13 108188177 108188206 -12096106 + AT_rich Low_complexity Low_complexity 1 29 0 2 1410 495 239 0 0 chr13 108188583 108188713 -12095599 + GA-rich Low_complexity Low_complexity 3 132 0 2 1410 462 264 45 18 chr13 108188904 108189016 -12095296 + PB1D10 SINE Alu 3 117 0 2 1410 333 293 326 9 chr13 108189173 108189381 -12094931 + MER119 DNA MER1_type 2 275 -308 2 1410 9436 88 55 8 chr13 108189706 108191262 -12093050 + MusHAL1 LINE L1 451 2080 -632 2 1410 291 326 7 15 chr13 108191404 108191541 -12092771 + L1MC4 LINE L1 7286 7421 -621 2 1410 434 248 19 47 chr13 108191943 108192049 -12092263 - Lx8 LINE L1 -1099 6374 6272 2 1410 587 171 34 8 chr13 108192052 108192170 -12092142 + Lx8 LINE L1 6389 6509 -964 2 1410 186 43 0 0 chr13 108192475 108192498 -12091814 + (CTG)n Simple_repeat Simple_repeat 1 23 0 2 1410 480 337 87 82 chr13 108192902 108193364 -12090948 - MLT1H LTR MaLR -14 535 72 2 1410 296 406 33 77 chr13 108193406 108193742 -12090570 - ORR1E LTR MaLR 0 359 39 2 1410 28 29 0 0 chr13 108194016 108194051 -12090261 + AT_rich Low_complexity Low_complexity 1 35 0 2 1410 1153 43 0 0 chr13 108194479 108194618 -12089694 + B1_Mus2 SINE Alu 1 139 -8 2 1410 1002 257 50 3 chr13 108195182 108195522 -12088790 - L1ME1 LINE L1 -16 6163 5808 2 1410 180 0 0 0 chr13 108195538 108195558 -12088754 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1410 1162 61 14 0 chr13 108195777 108195924 -12088388 + B1_Mur4 SINE Alu 2 150 0 2 1410 285 128 0 0 chr13 108195924 108195971 -12088341 + (A)n Simple_repeat Simple_repeat 1 47 0 2 1410 367 280 162 20 chr13 108196085 108196289 -12088023 - L1ME1 LINE L1 -424 5755 5523 2 1410 347 291 176 6 chr13 108196942 108197118 -12087194 + MIRb SINE MIR 40 245 -23 2 1410 463 322 102 19 chr13 108198242 108198448 -12085864 + MER58A DNA MER1_type 2 224 0 2 1410 439 321 0 21 chr13 108198457 108198597 -12085715 + MER5A DNA MER1_type 7 143 -46 2 1410 226 232 68 39 chr13 108198616 108198719 -12085593 - L1MA6 LINE L1 -10 6290 6185 2 1410 939 216 104 0 chr13 108198899 108199130 -12085182 - Lx5 LINE L1 -4 7046 6792 2 1410 285 281 21 0 chr13 108199256 108199352 -12084960 + (TG)n Simple_repeat Simple_repeat 1 98 0 2 1410 442 313 34 16 chr13 108199353 108199516 -12084796 - B4A SINE B4 -54 170 2 2 1410 228 269 30 0 chr13 108199516 108199579 -12084733 + MER5A DNA MER1_type 125 189 0 2 1410 369 0 0 0 chr13 108200388 108200429 -12083883 + (TG)n Simple_repeat Simple_repeat 1 41 0 2 1410 600 221 129 8 chr13 108200433 108200565 -12083747 - RSINE1 SINE B4 -14 151 4 2 1410 495 336 37 44 chr13 108200992 108201353 -12082959 + ORR1E LTR MaLR 19 370 0 2 1410 294 315 27 0 chr13 108201876 108201949 -12082363 - MER5A DNA MER1_type -76 113 39 2 1410 2964 23 0 25 chr13 108202290 108202643 -12081669 - ORR1A0 LTR MaLR 0 346 3 2 1410 853 155 34 16 chr13 108203115 108203277 -12081035 + MTC LTR MaLR 1 150 -250 3 1410 207 178 44 0 chr13 108203342 108203387 -12080925 + (TATATG)n Simple_repeat Simple_repeat 3 49 0 3 1410 935 276 21 43 chr13 108203393 108203673 -12080639 - B4A SINE B4 -17 275 2 3 1410 213 39 0 0 chr13 108203915 108203941 -12080371 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1410 1839 194 36 16 chr13 108204905 108205293 -12079019 + RLTR16 LTR ERVK 1 396 -109 3 1410 1006 213 112 8 chr13 108205501 108205742 -12078570 + MTD LTR MaLR 12 277 -142 3 1410 6342 70 9 17 chr13 108205839 108207580 -12076732 + L1VL2 LINE L1 98 1826 -1789 3 1410 340 292 0 0 chr13 108207723 108207812 -12076500 - PB1D10 SINE Alu -2 115 27 3 1410 27 81 0 0 chr13 108208615 108208677 -12075635 + AT_rich Low_complexity Low_complexity 1 62 0 3 1410 343 331 99 8 chr13 108208873 108209004 -12075308 + B1F SINE Alu 1 143 -6 3 1410 579 327 102 28 chr13 108209421 108209704 -12074608 - LTR52 LTR ERVL -95 326 23 3 1410 532 259 9 0 chr13 108209727 108209843 -12074469 + RSINE1 SINE B4 11 127 -38 3 1410 801 240 50 10 chr13 108209913 108210111 -12074201 + B3 SINE B2 1 206 -10 3 1410 255 330 18 44 chr13 108210159 108210273 -12074039 - MER3 DNA MER1_type -24 185 75 3 1410 494 279 35 81 chr13 108210333 108210505 -12073807 + MER58B DNA MER1_type 147 310 -31 3 1410 877 149 11 0 chr13 108211083 108211258 -12073054 + (TG)n Simple_repeat Simple_repeat 2 178 0 3 1410 662 274 29 0 chr13 108211269 108211444 -12072868 - B3A SINE B2 -18 180 1 3 1410 1930 235 90 47 chr13 108211660 108212017 -12072295 - L1MC1 LINE L1 0 6333 5960 3 1410 1424 226 41 67 chr13 108212017 108212406 -12071906 + MTE2a LTR MaLR 1 379 0 3 1410 1930 235 90 47 chr13 108212406 108212750 -12071562 - L1MC1 LINE L1 -374 5959 5602 3 1410 368 250 29 115 chr13 108212845 108212949 -12071363 - PB1D10 SINE Alu -16 101 7 3 1410 381 149 0 15 chr13 108212966 108213034 -12071278 - L1MC1 LINE L1 -739 5605 5539 3 1410 467 130 60 0 chr13 108213055 108213155 -12071157 - Lx9 LINE L1 -8 7636 7531 3 1410 1204 43 0 0 chr13 108213179 108213319 -12070993 + B1_Mus2 SINE Alu 2 141 -6 3 1410 422 36 0 18 chr13 108213322 108213379 -12070933 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 3 1410 1120 248 62 53 chr13 108213379 108213929 -12070383 - L1MCa LINE L1 -1574 4747 4193 3 1410 2035 208 130 4 chr13 108213966 108214435 -12069877 + ORR1D1-int LTR MaLR 843 1370 0 3 1410 1351 207 106 9 chr13 108214435 108214766 -12069546 + ORR1D1 LTR MaLR 1 363 -11 3 1410 1951 219 77 13 chr13 108214781 108215460 -12068852 - L1MCa LINE L1 -2704 3617 2896 3 1410 327 25 0 0 chr13 108215597 108215637 -12068675 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 3 1410 1077 273 91 55 chr13 108215658 108216406 -12067906 - L1M2 LINE L1 -867 5273 4459 3 1410 1408 71 16 0 chr13 108216406 108216590 -12067722 - B2_Mm2 SINE B2 -8 187 1 3 1410 1077 263 84 59 chr13 108216590 108216714 -12067598 - L1M2 LINE L1 -1682 4461 4354 3 1410 617 346 12 12 chr13 108216728 108216892 -12067420 - RSINE1 SINE B4 0 165 2 3 1410 547 280 10 24 chr13 108216894 108217099 -12067213 - L1M2 LINE L1 -1777 4366 4165 3 1410 485 223 0 8 chr13 108217137 108217268 -12067044 + CT-rich Low_complexity Low_complexity 3 132 0 3 1410 1342 333 63 8 chr13 108217268 108218338 -12065974 - L1M2 LINE L1 -2876 3267 2139 3 1410 1016 293 80 23 chr13 108218676 108218945 -12065367 + Lx9 LINE L1 6365 6655 -989 3 1410 708 12 0 0 chr13 108218945 108219026 -12065286 + (GA)n Simple_repeat Simple_repeat 2 82 0 3 1410 1016 293 80 23 chr13 108219026 108219154 -12065158 + Lx9 LINE L1 6656 6784 -860 3 1410 627 261 127 17 chr13 108219154 108219412 -12064900 + MTD LTR MaLR 97 419 0 3 1410 465 66 0 0 chr13 108219765 108219826 -12064486 + (TC)n Simple_repeat Simple_repeat 2 62 0 3 1410 349 285 81 8 chr13 108219953 108220077 -12064235 + MTD-int LTR MaLR 1122 1254 -4 3 1410 719 263 95 0 chr13 108220082 108220261 -12064051 + MTD LTR MaLR 1 196 -223 3 1410 405 0 0 0 chr13 108220415 108220460 -12063852 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1410 567 346 31 6 chr13 108220466 108220629 -12063683 - B3A SINE B2 -31 167 1 3 1410 843 281 125 65 chr13 108220632 108221553 -12062759 - L1MCa LINE L1 -4864 1644 669 3 1410 364 250 67 45 chr13 108221760 108221894 -12062418 - L1MCa LINE L1 -5813 695 559 3 1410 538 301 0 7 chr13 108221917 108222054 -12062258 - ID_B1 SINE B4 -2 222 87 3 1410 356 291 46 33 chr13 108222160 108222313 -12061999 - L1MCa LINE L1 -5986 522 368 3 1410 486 73 0 29 chr13 108222331 108222401 -12061911 + L1Md_F2 LINE L1 62 129 -6393 3 1410 7987 77 4 16 chr13 108222393 108223866 -12060446 + L1Md_F2 LINE L1 62 1618 -4268 3 1410 22452 70 13 1 chr13 108223863 108226798 -12057514 + L1Md_F2 LINE L1 2619 5589 -297 3 1410 8138 49 3 1 chr13 108226798 108227792 -12056520 + L1Md_F2 LINE L1 5590 6585 0 3 1410 236 53 0 26 chr13 108227855 108227894 -12056418 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 3 1410 787 162 22 7 chr13 108227894 108228031 -12056281 - B1_Mur3 SINE Alu -10 139 1 3 1410 499 277 119 0 chr13 108228125 108228284 -12056028 - L1MCa LINE L1 -6330 178 1 3 1410 186 50 75 0 chr13 108230586 108230626 -12053686 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1410 686 275 22 11 chr13 108230783 108230963 -12053349 + B3A SINE B2 1 182 -16 3 1410 237 241 0 36 chr13 108230963 108231019 -12053293 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 3 1410 482 285 203 24 chr13 108231346 108231922 -12052390 + L1MD LINE L1 4149 4827 -1319 3 1410 849 308 7 30 chr13 108231931 108232226 -12052086 + B4 SINE B4 1 288 -4 3 1410 371 257 88 0 chr13 108233066 108233202 -12051110 + MER33 DNA MER1_type 67 214 -110 3 1410 760 241 10 111 chr13 108233886 108234223 -12050089 + RLTR11B LTR ERVK 1 296 -145 3 1410 382 250 88 33 chr13 108234241 108234403 -12049909 + RLTR11B LTR ERVK 284 489 -39 3 1410 241 324 0 0 chr13 108236627 108236695 -12047617 - B4A SINE B4 -7 285 218 3 1410 281 316 11 0 chr13 108236758 108236853 -12047459 - B4A SINE B4 0 292 197 3 1410 471 276 24 0 chr13 108236868 108236995 -12047317 - B4 SINE B4 -157 135 6 3 1410 327 49 0 0 chr13 108237134 108237175 -12047137 + (TA)n Simple_repeat Simple_repeat 1 41 0 3 1410 487 193 26 20 chr13 108237278 108237431 -12046881 + CT-rich Low_complexity Low_complexity 2 155 0 3 1410 26 0 0 0 chr13 108238213 108238239 -12046073 + AT_rich Low_complexity Low_complexity 1 26 0 3 1410 376 233 0 0 chr13 108238244 108238317 -12045995 + RSINE1 SINE B4 3 75 -90 3 1410 486 61 0 0 chr13 108238323 108238389 -12045923 + (CA)n Simple_repeat Simple_repeat 2 67 0 3 1410 531 287 16 0 chr13 108239094 108239223 -12045089 + B4A SINE B4 160 290 -2 3 1410 1014 254 60 116 chr13 108240233 108240315 -12043997 + MTE2b LTR MaLR 1 81 -298 3 1410 552 56 0 0 chr13 108240315 108240387 -12043925 + (TTG)n Simple_repeat Simple_repeat 2 73 0 3 1410 1014 254 60 116 chr13 108240387 108240701 -12043611 + MTE2b LTR MaLR 82 375 -4 3 1410 616 236 13 53 chr13 108241512 108241664 -12042648 + B1_Mur1 SINE Alu 3 148 -1 3 1410 616 272 222 7 chr13 108242512 108242945 -12041367 + MLT1F LTR MaLR 19 544 -4 3 1410 813 280 37 0 chr13 108242929 108243143 -12041169 - ORR1E LTR MaLR -132 227 6 3 1410 387 216 19 29 chr13 108243148 108243253 -12041059 - ORR1E-int LTR MaLR 0 1370 1267 3 1410 1297 265 24 43 chr13 108243236 108243613 -12040699 - ORR1E-int LTR MaLR -1279 456 9 3 1410 701 234 76 227 chr13 108243613 108244049 -12040263 - ORR1D2 LTR MaLR 0 370 1 3 1410 227 379 49 60 chr13 108244049 108244118 -12040194 - ORR1E-int LTR MaLR -1654 81 16 3 1410 2591 130 7 44 chr13 108244227 108244636 -12039676 - ORR1B1 LTR MaLR 0 394 1 3 1410 269 26 26 0 chr13 108244692 108244730 -12039582 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1410 856 168 12 12 chr13 108245664 108245833 -12038479 + URR1A DNA MER1_type 58 226 0 3 1410 277 304 14 82 chr13 108247124 108247271 -12037041 - MER102c DNA MER1_type -127 204 68 3 1410 2634 248 54 35 chr13 108248807 108249593 -12034719 - L1MC2 LINE L1 -190 6154 5350 3 1410 1762 171 82 8 chr13 108249593 108249947 -12034365 - ORR1C2 LTR MaLR -4 380 1 3 1410 2634 278 42 21 chr13 108249947 108250079 -12034233 - L1MC2 LINE L1 -795 5351 5217 3 1410 848 230 141 19 chr13 108250160 108250620 -12033692 - RMER5 LTR ERV1 0 534 19 3 1410 35 0 0 0 chr13 108250801 108250836 -12033476 + AT_rich Low_complexity Low_complexity 1 35 0 3 1410 351 0 0 0 chr13 108251102 108251141 -12033171 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1410 468 0 0 0 chr13 108251141 108251192 -12033120 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1410 205 182 0 0 chr13 108251552 108251585 -12032727 + polypurine Low_complexity Low_complexity 4 36 0 3 1410 212 0 36 0 chr13 108252315 108252343 -12031969 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 3 1410 232 208 130 40 chr13 108252361 108252461 -12031851 + MIRc SINE MIR 92 200 -68 3 1410 1919 176 83 23 chr13 108252909 108253304 -12031008 + MTC LTR MaLR 3 421 0 3 1410 511 292 0 0 chr13 108253908 108254052 -12030260 - RSINE1 SINE B4 -20 145 2 3 1410 544 215 121 15 chr13 108254337 108254469 -12029843 - B1F SINE Alu -3 146 1 3 1410 800 288 41 54 chr13 108255049 108255343 -12028969 + B4 SINE B4 2 291 -1 3 1410 3937 103 7 11 chr13 108255443 108256003 -12028309 + Lx2A1 LINE L1 6440 6997 -11 3 1410 362 341 65 48 chr13 108256216 108256447 -12027865 + MIR SINE MIR 18 252 -10 3 1410 186 43 0 0 chr13 108256682 108256705 -12027607 + (GGA)n Simple_repeat Simple_repeat 1 23 0 3 1410 872 51 0 8 chr13 108256890 108257009 -12027303 + (TCCC)n Simple_repeat Simple_repeat 3 120 0 3 1410 180 234 0 0 chr13 108257299 108257346 -12026966 + L2b LINE L2 3229 3275 -100 3 1410 298 135 37 98 chr13 108257945 108258027 -12026285 - L1ME2z LINE L1 -29 6415 6339 3 1410 383 299 82 0 chr13 108258947 108259081 -12025231 + B1F SINE Alu 3 147 -2 3 1410 186 71 0 0 chr13 108259104 108259132 -12025180 + (CCA)n Simple_repeat Simple_repeat 3 30 0 3 1410 195 363 11 11 chr13 108261794 108261886 -12022426 + MIR SINE MIR 132 223 -39 3 1410 229 214 35 18 chr13 108261904 108261961 -12022351 - PB1D7 SINE Alu -58 62 5 3 1410 2044 170 338 21 chr13 108262471 108263031 -12021281 - RMER19A LTR ERVK 0 737 1 3 1410 251 279 46 11 chr13 108263953 108264040 -12020272 + B1F SINE Alu 24 113 -36 3 1410 338 260 13 25 chr13 108264064 108264143 -12020169 + ID4_ SINE ID 3 80 -3 3 1411 421 282 10 0 chr13 108266902 108267005 -12017307 - PB1D10 SINE Alu -12 105 2 3 1411 423 0 0 0 chr13 108267181 108267228 -12017084 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1411 300 242 57 159 chr13 108267348 108267505 -12016807 - B4 SINE B4 -151 141 1 3 1411 189 312 47 0 chr13 108268225 108268289 -12016023 - MIRm SINE MIR -105 171 105 3 1411 24 0 0 0 chr13 108269157 108269181 -12015131 + AT_rich Low_complexity Low_complexity 1 24 0 3 1411 1186 56 0 0 chr13 108269294 108269437 -12014875 + B1_Mus2 SINE Alu 2 144 -3 3 1411 309 51 0 0 chr13 108269437 108269476 -12014836 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 3 1411 288 0 0 0 chr13 108269519 108269551 -12014761 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 3 1411 473 202 61 0 chr13 108272003 108272102 -12012210 - B1F SINE Alu -2 147 43 4 1411 549 157 32 7 chr13 108272971 108273125 -12011187 + (TA)n Simple_repeat Simple_repeat 1 158 0 4 1411 219 139 0 0 chr13 108273176 108273212 -12011100 + (TA)n Simple_repeat Simple_repeat 2 37 0 4 1411 396 0 0 0 chr13 108273212 108273256 -12011056 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 4 1411 270 0 0 0 chr13 108273256 108273285 -12011027 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1411 502 290 101 0 chr13 108273341 108273548 -12010764 - ORSL-2b DNA Tip100 -280 228 1 4 1411 369 43 0 0 chr13 108273861 108273908 -12010404 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1411 33 0 0 0 chr13 108275345 108275378 -12008934 + AT_rich Low_complexity Low_complexity 1 33 0 4 1411 516 261 26 60 chr13 108275390 108275541 -12008771 - B1F SINE Alu 0 149 4 4 1411 279 0 0 0 chr13 108276572 108276603 -12007709 + (TTTC)n Simple_repeat Simple_repeat 1 31 0 4 1411 1125 83 0 0 chr13 108276603 108276782 -12007530 + (CTTG)n Simple_repeat Simple_repeat 1 180 0 4 1411 423 128 0 0 chr13 108276782 108276868 -12007444 + (TTTC)n Simple_repeat Simple_repeat 4 89 0 4 1411 1164 68 7 0 chr13 108277018 108277165 -12007147 + B1_Mus1 SINE Alu 1 148 0 4 1411 366 114 0 0 chr13 108277165 108277235 -12007077 + (A)n Simple_repeat Simple_repeat 1 70 0 4 1411 989 113 0 0 chr13 108277242 108277383 -12006929 + B2_Mm2 SINE B2 2 142 -53 4 1411 182 91 30 0 chr13 108277384 108277417 -12006895 + (TA)n Simple_repeat Simple_repeat 2 35 0 4 1411 485 300 97 115 chr13 108280218 108280441 -12003871 - MLT1A1 LTR MaLR -38 370 142 4 1411 392 230 418 7 chr13 108280441 108280594 -12003718 - B3 SINE B2 0 216 1 4 1411 485 300 97 115 chr13 108280594 108280701 -12003611 - MLT1A1 LTR MaLR -267 141 46 4 1411 315 0 0 0 chr13 108280724 108280759 -12003553 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1411 489 256 232 64 chr13 108281982 108282232 -12002080 - B4 SINE B4 0 292 1 4 1411 1407 234 62 6 chr13 108282351 108282512 -12001800 - RLTR14 LTR ERV1 -5 377 205 4 1411 194 0 0 37 chr13 108282512 108282539 -12001773 + (CAA)n Simple_repeat Simple_repeat 1 26 0 4 1411 1407 234 62 6 chr13 108282539 108282734 -12001578 - RLTR14 LTR ERV1 -178 204 2 4 1411 2802 74 58 0 chr13 108283052 108283430 -12000882 - MTB LTR MaLR 0 400 1 4 1411 300 161 0 0 chr13 108283535 108283597 -12000715 + CT-rich Low_complexity Low_complexity 3 64 0 4 1411 498 91 0 0 chr13 108284295 108284372 -11999940 + (GA)n Simple_repeat Simple_repeat 1 77 0 4 1411 450 0 0 0 chr13 108285224 108285274 -11999038 + (TG)n Simple_repeat Simple_repeat 2 51 0 4 1411 27 0 0 0 chr13 108286464 108286491 -11997821 + AT_rich Low_complexity Low_complexity 1 27 0 4 1411 23 0 0 0 chr13 108286699 108286722 -11997590 + AT_rich Low_complexity Low_complexity 1 23 0 4 1411 414 318 92 17 chr13 108286997 108287251 -11997061 - MLT1B LTR MaLR -34 356 74 4 1411 247 299 63 71 chr13 108287592 108287830 -11996482 - L1MC5 LINE L1 -69 7892 7657 4 1411 375 269 60 9 chr13 108288573 108288689 -11995623 + RSINE1 SINE B4 3 124 -41 4 1411 333 0 0 0 chr13 108288807 108288844 -11995468 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1411 717 23 0 0 chr13 108289769 108289856 -11994456 + (TG)n Simple_repeat Simple_repeat 1 87 0 4 1411 566 121 9 0 chr13 108289856 108289972 -11994340 + (GA)n Simple_repeat Simple_repeat 2 118 0 4 1411 682 282 85 31 chr13 108290009 108290269 -11994043 - B4A SINE B4 -17 275 2 4 1411 463 149 16 0 chr13 108291725 108291846 -11992466 + CT-rich Low_complexity Low_complexity 2 124 0 4 1411 290 262 58 23 chr13 108291846 108291932 -11992380 - ID_B1 SINE B4 -14 210 122 4 1411 399 311 29 45 chr13 108292712 108293036 -11991276 - L1ME1 LINE L1 -1 6177 5861 4 1411 243 88 0 0 chr13 108293218 108293252 -11991060 + (GGGA)n Simple_repeat Simple_repeat 4 37 0 4 1411 231 311 206 18 chr13 108293719 108293889 -11990423 - MLT1K LTR MaLR -78 517 316 4 1411 268 349 17 46 chr13 108294936 108295110 -11989202 + ERVL-E-int LTR ERVL 437 605 -5062 4 1411 298 364 61 54 chr13 108295136 108295563 -11988749 + ERVL-int LTR ERVL 4613 5042 -715 4 1411 306 107 0 0 chr13 108296850 108296906 -11987406 + (A)n Simple_repeat Simple_repeat 1 56 0 4 1411 223 331 53 30 chr13 108297666 108297797 -11986515 + MIRb SINE MIR 41 174 -94 4 1411 225 24 23 45 chr13 108298549 108298593 -11985719 + (TTG)n Simple_repeat Simple_repeat 2 44 0 4 1411 517 286 139 53 chr13 108300474 108300777 -11983535 - MLT1J1 LTR MaLR -35 409 81 4 1411 486 290 74 32 chr13 108300977 108301166 -11983146 - B3A SINE B2 0 198 2 4 1411 1001 230 4 57 chr13 108301300 108301372 -11982940 + ID SINE ID 4 74 -150 4 1411 3309 26 23 0 chr13 108301372 108301759 -11982553 - MTA_Mm LTR MaLR 0 396 1 4 1411 1001 230 4 57 chr13 108301759 108301916 -11982396 + ID_B1 SINE B4 75 221 -3 4 1411 663 249 47 21 chr13 108302133 108302283 -11982029 + B3A SINE B2 1 155 -43 4 1411 402 74 0 0 chr13 108302283 108302337 -11981975 + (CATA)n Simple_repeat Simple_repeat 4 57 0 4 1411 663 249 47 21 chr13 108302337 108302379 -11981933 + B3A SINE B2 156 197 -1 4 1411 366 248 0 0 chr13 108303279 108303388 -11980924 + (TG)n Simple_repeat Simple_repeat 2 110 0 4 1411 783 285 73 12 chr13 108303415 108303660 -11980652 - B4 SINE B4 -16 276 17 4 1411 351 0 0 0 chr13 108303664 108303703 -11980609 + (TC)n Simple_repeat Simple_repeat 1 39 0 4 1411 895 294 116 47 chr13 108304865 108306026 -11978286 + L1MD2 LINE L1 798 2045 -4595 4 1411 732 264 13 111 chr13 108306070 108306296 -11978016 + B4A SINE B4 22 225 -67 4 1411 691 206 22 22 chr13 108306274 108306459 -11977853 + B3 SINE B2 8 189 -4 4 1411 390 91 0 0 chr13 108306551 108306606 -11977706 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1411 306 73 0 0 chr13 108306608 108306649 -11977663 + (GGGAGA)n Simple_repeat Simple_repeat 3 43 0 4 1411 560 245 14 27 chr13 108306765 108306912 -11977400 - B1_Mus2 SINE Alu -1 146 2 4 1411 693 295 111 69 chr13 108306949 108307933 -11976379 + L1MD2 LINE L1 2281 3301 -3243 4 1411 6491 192 92 25 chr13 108307964 108309425 -11974887 - Lx7 LINE L1 0 7696 6138 4 1411 975 284 139 18 chr13 108309438 108310119 -11974193 + L1MD2 LINE L1 3322 4085 -2459 4 1411 2215 16 0 0 chr13 108310285 108310531 -11973781 + L1Md_T LINE L1 5341 5586 -297 4 1411 9172 5 0 0 chr13 108310531 108311527 -11972785 + L1Md_T LINE L1 5587 6582 0 4 1411 1157 294 106 39 chr13 108311539 108312391 -11971921 + L1MD2 LINE L1 4795 5703 -841 4 1411 702 91 0 0 chr13 108312534 108312633 -11971679 + (TG)n Simple_repeat Simple_repeat 2 100 0 4 1411 265 308 109 38 chr13 108312639 108312947 -11971365 + L1MD2 LINE L1 5957 6402 -355 4 1411 625 250 7 0 chr13 108313005 108313145 -11971167 - B1F2 SINE Alu -8 141 1 4 1411 240 35 0 0 chr13 108313686 108313715 -11970597 + (TTCA)n Simple_repeat Simple_repeat 3 31 0 4 1411 362 211 52 12 chr13 108313794 108314030 -11970282 + (TA)n Simple_repeat Simple_repeat 1 245 0 4 1411 187 344 0 0 chr13 108316894 108316958 -11967354 + L2b LINE L2 3108 3171 -204 4 1411 404 358 91 34 chr13 108317796 108318116 -11966196 + L1MEd LINE L1 103 446 -5673 4 1411 462 36 0 0 chr13 108318116 108318172 -11966140 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1411 404 358 91 34 chr13 108318172 108318388 -11965924 + L1MEd LINE L1 447 669 -5450 4 1411 685 373 45 9 chr13 108318504 108318837 -11965475 - LTR16A LTR ERVL -15 436 92 4 1411 225 0 0 0 chr13 108319661 108319686 -11964626 + (TG)n Simple_repeat Simple_repeat 2 26 0 4 1411 1453 70 27 0 chr13 108319702 108319889 -11964423 - B2_Mm1a SINE B2 -1 192 1 4 1411 322 276 37 7 chr13 108319928 108320063 -11964249 + L1MEd LINE L1 2054 2192 -3957 4 1411 441 171 0 0 chr13 108321934 108321949 -11962363 + polypyrimidine Low_complexity Low_complexity 74 88 0 4 1411 1317 78 0 0 chr13 108321949 108322128 -11962184 + (TC)n Simple_repeat Simple_repeat 1 179 0 4 1411 441 171 0 0 chr13 108322128 108322145 -11962167 + polypyrimidine Low_complexity Low_complexity 57 73 0 4 1411 1184 101 6 0 chr13 108322145 108322323 -11961989 + (TC)n Simple_repeat Simple_repeat 1 179 0 4 1411 441 171 0 0 chr13 108322323 108322377 -11961935 + polypyrimidine Low_complexity Low_complexity 3 56 0 4 1411 632 352 34 16 chr13 108322678 108323001 -11961311 + MER90a LTR ERV1 286 614 0 4 1411 383 414 32 24 chr13 108323159 108323409 -11960903 - LTR33 LTR ERVL -113 402 151 4 1411 1383 266 64 10 chr13 108323451 108323839 -11960473 + MER54A LTR ERVL 18 426 -475 4 1411 1162 293 26 6 chr13 108323896 108324246 -11960066 + MER54A LTR ERVL 530 886 -15 4 1411 484 346 93 0 chr13 108324581 108324786 -11959526 - MLT1D LTR MaLR -96 409 186 4 1411 699 88 0 0 chr13 108324806 108324919 -11959393 + (TC)n Simple_repeat Simple_repeat 2 114 0 4 1411 267 361 115 4 chr13 108325101 108325335 -11958977 - L1MD3 LINE L1 -288 7754 7495 4 1411 462 308 14 14 chr13 108325562 108325707 -11958605 - RSINE1 SINE B4 -20 145 1 4 1411 364 325 53 0 chr13 108325846 108325997 -11958315 - L1MD3 LINE L1 -1115 6880 6722 4 1411 2432 183 38 11 chr13 108326269 108326722 -11957590 + Lx9 LINE L1 6279 6743 -901 4 1411 207 172 23 0 chr13 108326788 108326840 -11957472 + MIR SINE MIR 80 132 -144 4 1411 699 315 85 12 chr13 108326843 108327075 -11957237 - L1MC4 LINE L1 -1142 6900 6645 4 1411 1127 130 5 49 chr13 108327075 108327278 -11957034 - B2_Mm2 SINE B2 -1 194 1 4 1411 699 315 85 12 chr13 108327278 108327469 -11956843 - L1MC4 LINE L1 -1398 6644 6447 4 1411 185 266 89 50 chr13 108328194 108328357 -11955955 + MIR SINE MIR 34 204 -58 4 1411 1855 149 119 8 chr13 108328431 108328784 -11955528 + ORR1B1 LTR MaLR 3 394 0 4 1411 333 0 0 0 chr13 108331772 108331809 -11952503 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1411 429 20 0 0 chr13 108332790 108332840 -11951472 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1411 432 0 0 0 chr13 108332840 108332887 -11951425 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1411 303 322 83 50 chr13 108332925 108333105 -11951207 - MER5A DNA MER1_type 0 189 4 4 1411 300 230 0 12 chr13 108333107 108333175 -11951137 - PB1 SINE Alu -37 90 30 4 1411 393 22 0 0 chr13 108333781 108333827 -11950485 + (CA)n Simple_repeat Simple_repeat 1 46 0 4 1411 746 226 6 12 chr13 108334749 108334910 -11949402 + MTC LTR MaLR 262 421 0 4 1411 212 278 0 0 chr13 108334933 108334987 -11949325 - MIRm SINE MIR -8 268 215 4 1411 615 14 0 0 chr13 108337091 108337163 -11947149 + (TC)n Simple_repeat Simple_repeat 1 72 0 4 1411 21 0 0 0 chr13 108337464 108337485 -11946827 + AT_rich Low_complexity Low_complexity 1 21 0 4 1411 1224 48 0 0 chr13 108337808 108337955 -11946357 + B1_Mus2 SINE Alu 1 147 0 4 1411 227 335 57 26 chr13 108339400 108339593 -11944719 + L2 LINE L2 2617 2815 -604 5 1411 683 105 48 0 chr13 108339784 108339889 -11944423 + B1_Mus1 SINE Alu 39 148 0 5 1411 747 108 0 0 chr13 108339889 108340000 -11944312 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 5 1411 429 20 0 0 chr13 108339997 108340047 -11944265 + (GAGAA)n Simple_repeat Simple_repeat 3 52 0 5 1411 1141 96 11 6 chr13 108340047 108340225 -11944087 + (GGAAA)n Simple_repeat Simple_repeat 2 180 0 5 1411 21 57 0 0 chr13 108341627 108341662 -11942650 + AT_rich Low_complexity Low_complexity 1 35 0 5 1411 954 235 74 135 chr13 108342025 108342537 -11941775 - RLTR12B LTR ERVK -6 522 42 5 1411 738 280 25 25 chr13 108342578 108342776 -11941536 + B4A SINE B4 1 198 -94 5 1411 1334 97 16 5 chr13 108342967 108343154 -11941158 - B2_Mm2 SINE B2 -6 189 1 5 1411 946 226 34 5 chr13 108343181 108343390 -11940922 - B3 SINE B2 0 216 2 5 1411 504 72 0 0 chr13 108343505 108343574 -11940738 + (GA)n Simple_repeat Simple_repeat 2 70 0 5 1411 232 273 20 0 chr13 108343593 108343692 -11940620 + GA-rich Low_complexity Low_complexity 2 102 0 5 1411 230 274 40 14 chr13 108344213 108344287 -11940025 - MTE2a LTR MaLR -23 356 281 5 1411 1172 28 0 7 chr13 108344913 108345055 -11939257 + B1_Mus2 SINE Alu 1 141 -6 5 1411 279 0 0 0 chr13 108345059 108345090 -11939222 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 5 1411 1151 169 27 18 chr13 108345339 108345562 -11938750 + URR1B DNA MER1_type 1 225 0 5 1411 1307 286 94 45 chr13 108346473 108347386 -11936926 + L1MEc LINE L1 57 1014 -5386 5 1411 340 192 39 13 chr13 108347395 108347414 -11936898 + (TA)n Simple_repeat Simple_repeat 1 19 0 5 1411 3487 33 0 0 chr13 108347414 108347810 -11936502 + MTA_Mm LTR MaLR 1 396 0 5 1411 340 192 39 13 chr13 108347810 108347943 -11936369 + (TA)n Simple_repeat Simple_repeat 2 138 0 5 1411 527 262 157 4 chr13 108348136 108348385 -11935927 + L1MEc LINE L1 2139 2425 -3975 5 1411 440 202 20 0 chr13 108348383 108348482 -11935830 + Lx9 LINE L1 7534 7634 -10 5 1411 361 301 63 79 chr13 108348511 108348713 -11935599 - L1M5 LINE L1 -1577 4569 4373 5 1411 467 263 0 42 chr13 108348713 108348832 -11935480 - PB1D7 SINE Alu -6 114 1 5 1411 361 301 63 79 chr13 108348832 108348932 -11935380 - L1M5 LINE L1 -1774 4372 4272 5 1411 1414 224 19 38 chr13 108349036 108349402 -11934910 - MTD LTR MaLR -2 417 59 5 1411 311 173 48 96 chr13 108349464 108349547 -11934765 - L1MD LINE L1 -2055 4091 4013 5 1411 195 301 14 14 chr13 108349578 108349652 -11934660 - L2a LINE L2 -114 3312 3239 5 1411 201 276 17 0 chr13 108350265 108350323 -11933989 - L3 LINE CR1 -637 3852 3794 5 1411 702 220 0 0 chr13 108352314 108352446 -11931866 + B1_Mus1 SINE Alu 3 134 -14 5 1411 445 241 8 8 chr13 108352452 108352586 -11931726 + G-rich Low_complexity Low_complexity 1 134 0 5 1411 918 352 49 30 chr13 108352631 108353240 -11931072 + ERVL-B4-int LTR ERVL 2080 2700 -3014 5 1411 653 250 47 11 chr13 108353567 108353757 -11930555 + MER105 DNA DNA 6 202 -2 5 1411 280 143 155 14 chr13 108353855 108353926 -11930386 - MLT1F1 LTR MaLR -484 85 5 5 1411 4539 131 57 11 chr13 108354860 108355565 -11928747 - RMER19A LTR ERVK 0 737 1 5 1411 304 395 78 4 chr13 108355967 108356211 -11928101 + LTR16E2 LTR ERVL 307 568 0 5 1411 234 0 0 0 chr13 108356237 108356263 -11928049 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 5 1411 233 242 23 31 chr13 108356766 108356876 -11927436 - MIR3 SINE MIR -25 183 77 5 1411 2878 235 83 21 chr13 108356937 108357792 -11926520 - RCHARR1 DNA MER1_type 0 974 67 5 1411 468 0 0 0 chr13 108358494 108358546 -11925766 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1411 343 303 45 27 chr13 108359063 108359175 -11925137 + LTR33A LTR ERVL 81 194 -326 5 1411 386 330 51 112 chr13 108359828 108360139 -11924173 - B4A SINE B4 0 292 1 5 1411 752 221 0 7 chr13 108360652 108360802 -11923510 - B1_Mur4 SINE Alu 0 150 2 5 1411 564 15 0 0 chr13 108362454 108362519 -11921793 + (GA)n Simple_repeat Simple_repeat 2 66 0 5 1411 1013 86 12 12 chr13 108363414 108363579 -11920733 + (GGGA)n Simple_repeat Simple_repeat 1 165 0 5 1411 594 0 0 0 chr13 108363579 108363644 -11920668 + (GAAA)n Simple_repeat Simple_repeat 1 66 0 5 1411 1260 114 119 0 chr13 108365840 108366042 -11918270 - URR1A DNA MER1_type 0 226 1 5 1411 549 241 0 0 chr13 108366270 108366440 -11917872 + (TG)n Simple_repeat Simple_repeat 1 170 0 5 1411 611 330 106 72 chr13 108366445 108366918 -11917394 - MLT2B3 LTR ERVL -44 510 22 5 1411 229 328 205 14 chr13 108367674 108367971 -11916341 - L2a LINE L2 -63 3363 3010 5 1411 1668 198 111 45 chr13 108368362 108368806 -11915506 + RLTR20B3 LTR ERVK 4 478 -99 5 1411 447 19 0 0 chr13 108368806 108368858 -11915454 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1411 1668 198 111 45 chr13 108368858 108368899 -11915413 + RLTR20B3 LTR ERVK 479 520 -57 5 1411 21 0 0 0 chr13 108368914 108368935 -11915377 + AT_rich Low_complexity Low_complexity 1 21 0 5 1411 190 398 56 25 chr13 108368940 108369136 -11915176 - L2a LINE L2 -528 2891 2690 5 1411 814 204 12 49 chr13 108369297 108369587 -11914725 + RMER17C LTR ERVK 1 481 -328 5 1411 504 48 0 0 chr13 108369587 108369650 -11914662 + (TTCCC)n Simple_repeat Simple_repeat 5 67 0 5 1411 1116 179 42 66 chr13 108369650 108369984 -11914328 + RMER17C LTR ERVK 85 410 0 5 1411 267 31 0 0 chr13 108370140 108370172 -11914140 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 5 1411 509 198 158 33 chr13 108370174 108370294 -11914018 - B1_Mur2 SINE Alu -14 135 1 5 1411 646 177 113 54 chr13 108370321 108370506 -11913806 - B3A SINE B2 0 198 3 5 1411 1001 302 81 10 chr13 108370672 108371067 -11913245 - L1MD2 LINE L1 -433 6324 5902 5 1411 260 279 136 25 chr13 108371103 108371265 -11913047 - L1MB1 LINE L1 -206 5962 5783 5 1411 264 226 0 0 chr13 108371301 108371363 -11912949 + (TA)n Simple_repeat Simple_repeat 1 62 0 5 1411 839 250 36 8 chr13 108371364 108371613 -11912699 - L1MB1 LINE L1 -524 5788 5540 5 1411 980 116 0 0 chr13 108371613 108371760 -11912552 + B1_Mus2 SINE Alu 1 147 0 5 1411 310 223 176 20 chr13 108371779 108371893 -11912419 - L1MB1 LINE L1 -746 5545 5413 5 1411 360 0 0 0 chr13 108372105 108372145 -11912167 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1411 623 241 255 15 chr13 108372243 108372482 -11911830 - L1MB1 LINE L1 -799 5341 5034 5 1411 1017 85 0 0 chr13 108372482 108372623 -11911689 + (TC)n Simple_repeat Simple_repeat 1 141 0 5 1411 623 241 255 15 chr13 108372623 108372724 -11911588 - L1MB1 LINE L1 -1107 5033 4919 5 1411 1796 294 71 70 chr13 108372721 108373489 -11910823 + L1M3 LINE L1 3772 4570 -1570 5 1411 369 354 14 0 chr13 108373489 108373636 -11910676 + B1F SINE Alu 1 149 0 5 1411 1796 294 71 70 chr13 108373636 108373995 -11910317 + L1M3 LINE L1 4571 4900 -1240 5 1411 317 252 54 0 chr13 108373987 108374098 -11910214 - L1MD2 LINE L1 -1487 5057 4941 5 1411 29 47 0 0 chr13 108374270 108374313 -11909999 + AT_rich Low_complexity Low_complexity 1 43 0 5 1411 359 327 96 80 chr13 108374382 108374684 -11909628 - L1MD2 LINE L1 -6208 339 33 5 1411 660 22 0 11 chr13 108374756 108374849 -11909463 - L1Md_F2 LINE L1 -12 6570 6479 5 1411 24 0 0 0 chr13 108374968 108374992 -11909320 + AT_rich Low_complexity Low_complexity 1 24 0 5 1411 645 14 0 0 chr13 108376689 108376763 -11907549 + (CA)n Simple_repeat Simple_repeat 2 75 0 5 1411 543 56 0 0 chr13 108377579 108377650 -11906662 + (CA)n Simple_repeat Simple_repeat 1 71 0 5 1411 270 0 0 0 chr13 108379622 108379652 -11904660 + (TC)n Simple_repeat Simple_repeat 1 30 0 5 1411 396 337 60 82 chr13 108379715 108379812 -11904500 - MLT1H1 LTR MaLR -310 281 186 5 1411 399 68 0 0 chr13 108379812 108379871 -11904441 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1411 396 353 39 56 chr13 108379871 108380057 -11904255 - MLT1H1 LTR MaLR -370 185 1 5 1411 422 252 158 0 chr13 108383617 108383756 -11900556 - MER5A1 DNA MER1_type 0 166 6 5 1411 189 0 0 0 chr13 108385033 108385054 -11899258 + (CAAAA)n Simple_repeat Simple_repeat 3 23 0 5 1411 955 280 99 44 chr13 108386740 108387514 -11896798 - MER97a DNA MER1_type? -15 879 3 5 1411 234 0 0 0 chr13 108388142 108388168 -11896144 + (CAGA)n Simple_repeat Simple_repeat 3 28 0 5 1411 518 131 30 37 chr13 108388998 108389133 -11895179 + (CAGAGA)n Simple_repeat Simple_repeat 3 136 0 5 1411 684 241 21 0 chr13 108389702 108389843 -11894469 + ID_B1 SINE B4 80 223 -1 5 1411 199 79 26 26 chr13 108390638 108390677 -11893635 + (CCCCCA)n Simple_repeat Simple_repeat 2 40 0 5 1411 513 115 0 0 chr13 108391028 108391106 -11893206 + (CA)n Simple_repeat Simple_repeat 2 79 0 5 1411 328 356 138 12 chr13 108393154 108393487 -11890825 - L2c LINE L2 -83 3304 2930 5 1411 3881 241 68 21 chr13 108393492 108394940 -11889372 - Lx6 LINE L1 0 7460 5722 5 1411 1216 48 0 26 chr13 108395153 108395295 -11889017 + B1_Mus2 SINE Alu 1 141 -6 5 1411 222 37 0 0 chr13 108395295 108395322 -11888990 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 5 1412 309 118 0 0 chr13 108398717 108398768 -11885544 + (CA)n Simple_repeat Simple_repeat 1 51 0 5 1412 199 235 98 76 chr13 108399497 108399589 -11884723 - MIR3 SINE MIR -13 195 102 5 1412 241 316 51 0 chr13 108399873 108399952 -11884360 + U6 snRNA snRNA 3 85 -22 5 1412 3870 202 76 50 chr13 108402210 108402711 -11881601 - RMER17B LTR ERVK -50 858 359 5 1412 519 17 0 0 chr13 108402711 108402771 -11881541 + (GA)n Simple_repeat Simple_repeat 2 61 0 5 1412 3870 184 73 26 chr13 108402771 108403171 -11881141 - RMER17B LTR ERVK -525 433 1 5 1412 2326 106 0 0 chr13 108403261 108403582 -11880730 - ORR1A4 LTR MaLR -8 321 1 5 1412 2014 174 154 38 chr13 108403921 108404394 -11879918 - RLTR11A LTR ERVK 0 528 1 5 1412 213 65 0 0 chr13 108405250 108405281 -11879031 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 5 1412 242 314 67 44 chr13 108405462 108405552 -11878760 + MER5A DNA MER1_type 47 138 -51 5 1412 299 274 83 22 chr13 108410170 108410305 -11874007 - Charlie4z DNA MER1_type -9 158 14 5 1412 503 215 147 0 chr13 108410490 108410653 -11873659 - LTR33A LTR ERVL -49 471 285 5 1412 221 163 20 0 chr13 108411696 108411745 -11872567 + GA-rich Low_complexity Low_complexity 3 52 0 5 1412 979 94 0 48 chr13 108411747 108411936 -11872376 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 5 1412 571 278 134 76 chr13 108412009 108412285 -11872027 + MER63C DNA AcHobo 388 679 -251 5 1412 510 252 45 32 chr13 108412658 108412814 -11871498 + ID_B1 SINE B4 7 164 -60 5 1412 495 0 0 0 chr13 108412929 108412984 -11871328 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1412 5072 45 22 11 chr13 108413182 108413810 -11870502 + L1Md_F2 LINE L1 5948 6582 0 6 1412 249 300 89 41 chr13 108414087 108414233 -11870079 + MLT1L LTR MaLR 406 558 -52 6 1412 2322 136 6 14 chr13 108415712 108416078 -11868234 + ORR1B2 LTR MaLR 5 367 0 6 1412 919 288 112 40 chr13 108416078 108416534 -11867778 - MLT1F2 LTR MaLR -11 549 61 6 1412 429 138 0 0 chr13 108416534 108416614 -11867698 + (CA)n Simple_repeat Simple_repeat 1 80 0 6 1412 532 277 116 22 chr13 108416747 108416972 -11867340 - RMER20B LTR ERVK -200 427 182 6 1412 457 313 150 39 chr13 108417287 108417646 -11866666 - L2 LINE L2 -362 3057 2659 6 1412 323 187 128 39 chr13 108418535 108418613 -11865699 + 4.5SRNA scRNA scRNA 2 86 -8 6 1412 734 147 43 8 chr13 108418550 108418667 -11865645 + B1_Mur1 SINE Alu 29 149 0 6 1412 218 302 177 58 chr13 108419032 108419239 -11865073 - L2b LINE L2 -25 3362 3147 6 1412 815 153 73 0 chr13 108419891 108420028 -11864284 - B1_Mus1 SINE Alu 0 148 2 6 1412 1654 42 0 0 chr13 108420172 108420365 -11863947 + B2_Mm1t SINE B2 1 193 0 6 1412 492 62 0 0 chr13 108420622 108420686 -11863626 + (TA)n Simple_repeat Simple_repeat 1 64 0 6 1412 248 170 19 0 chr13 108421481 108421534 -11862778 + GA-rich Low_complexity Low_complexity 2 55 0 6 1412 501 264 60 6 chr13 108422176 108422359 -11861953 - MER53 DNA hAT 0 193 1 6 1412 1016 101 13 0 chr13 108422538 108422697 -11861615 + (CATATA)n Simple_repeat Simple_repeat 1 161 0 6 1412 499 173 0 18 chr13 108422712 108422824 -11861488 + (TA)n Simple_repeat Simple_repeat 1 110 0 6 1412 688 204 41 62 chr13 108422833 108422979 -11861333 - B1_Mur1 SINE Alu -1 148 6 6 1412 882 152 22 45 chr13 108423218 108423397 -11860915 - B2_Mm2 SINE B2 -20 175 1 6 1412 864 246 33 17 chr13 108423543 108423783 -11860529 - Tigger7 DNA MER2_type 0 2491 2249 6 1412 629 302 326 0 chr13 108423788 108424090 -11860222 - Tigger7 DNA MER2_type -2091 400 1 6 1412 198 0 0 0 chr13 108425179 108425201 -11859111 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 6 1412 445 300 297 20 chr13 108426110 108426470 -11857842 + MLT1D LTR MaLR 26 484 -21 6 1412 610 180 12 24 chr13 108427501 108427687 -11856625 + B3 SINE B2 17 192 -1 6 1412 1211 34 0 20 chr13 108427689 108427838 -11856474 + B1_Mus1 SINE Alu 1 146 -2 6 1412 829 278 40 18 chr13 108427846 108428073 -11856239 + B4A SINE B4 2 233 -59 6 1412 372 152 0 0 chr13 108428073 108428139 -11856173 + GA-rich Low_complexity Low_complexity 2 67 0 6 1412 189 74 0 0 chr13 108428286 108428313 -11855999 + (GA)n Simple_repeat Simple_repeat 2 28 0 6 1412 632 160 0 176 chr13 108429642 108429801 -11854511 - RLTR11B LTR ERVK -1 452 322 6 1412 723 192 102 168 chr13 108429806 108430062 -11854250 + ORR1B1 LTR MaLR 40 278 -116 6 1412 1474 156 11 38 chr13 108430010 108430063 -11854249 - RLTR11B LTR ERVK -193 260 215 6 1412 327 49 0 0 chr13 108430063 108430104 -11854208 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 6 1412 1474 156 11 38 chr13 108430104 108430317 -11853995 - RLTR11B LTR ERVK -239 214 1 6 1412 1911 205 73 13 chr13 108430427 108430822 -11853490 - MTD LTR MaLR 0 419 1 6 1412 677 103 178 23 chr13 108430869 108430998 -11853314 + B1_Mur3 SINE Alu 1 149 0 6 1412 221 106 14 70 chr13 108430998 108431069 -11853243 + A-rich Low_complexity Low_complexity 6 72 0 6 1412 1338 260 38 38 chr13 108431106 108431478 -11852834 - MTE2b LTR MaLR 0 379 8 6 1412 184 236 155 52 chr13 108431974 108432032 -11852280 + MER5A DNA MER1_type 120 183 -6 6 1412 314 323 10 0 chr13 108432076 108432172 -11852140 + MER5B DNA MER1_type 81 177 -1 6 1412 224 358 62 27 chr13 108433057 108433169 -11851143 - MIRb SINE MIR -34 234 119 6 1412 667 54 0 0 chr13 108433339 108433432 -11850880 + L1_Mus3 LINE L1 6540 6632 -6 6 1412 25 31 0 0 chr13 108433495 108433527 -11850785 + AT_rich Low_complexity Low_complexity 1 32 0 6 1412 319 246 0 0 chr13 108433675 108433740 -11850572 + ID4 SINE ID 8 72 -11 6 1412 325 277 11 46 chr13 108433791 108433878 -11850434 + L1M5 LINE L1 5256 5339 -785 6 1412 388 285 88 20 chr13 108433938 108434085 -11850227 + L1M5 LINE L1 5522 5678 -446 6 1412 22 0 0 0 chr13 108435826 108435848 -11848464 + AT_rich Low_complexity Low_complexity 1 22 0 6 1412 198 0 0 0 chr13 108437009 108437031 -11847281 + (TG)n Simple_repeat Simple_repeat 2 23 0 6 1412 549 310 24 57 chr13 108438055 108438267 -11846045 - MER20 DNA MER1_type -13 206 2 6 1412 373 270 40 0 chr13 108438372 108438472 -11845840 - B1_Mur3 SINE Alu -8 141 38 6 1412 704 214 0 51 chr13 108438538 108438676 -11845636 + B1_Mur2 SINE Alu 18 148 -1 6 1412 243 0 0 0 chr13 108438750 108438777 -11845535 + (CA)n Simple_repeat Simple_repeat 2 28 0 6 1412 262 349 38 0 chr13 108438936 108439042 -11845270 + LTR33 LTR ERVL 317 426 -89 6 1412 408 211 13 0 chr13 108439120 108439196 -11845116 - ID4 SINE ID -3 80 4 6 1412 528 254 9 17 chr13 108439198 108439314 -11844998 - PB1D10 SINE Alu -2 115 1 6 1412 530 315 41 20 chr13 108440881 108441101 -11843211 + MIR SINE MIR 21 241 -27 6 1412 6795 28 0 0 chr13 108441764 108442538 -11841774 + L1Md_T LINE L1 5809 6582 0 6 1412 372 335 13 116 chr13 108442660 108442893 -11841419 + LTR33 LTR ERVL 80 288 -227 6 1412 219 238 59 59 chr13 108443428 108443513 -11840799 - MIRc SINE MIR -67 201 117 6 1412 453 133 0 0 chr13 108444450 108444525 -11839787 + (CAGG)n Simple_repeat Simple_repeat 2 76 0 6 1412 878 87 7 0 chr13 108445181 108445319 -11838993 + (GGGA)n Simple_repeat Simple_repeat 1 139 0 6 1412 543 359 86 25 chr13 108446119 108446445 -11837867 + MLT1L LTR MaLR 263 608 -2 6 1412 203 302 167 19 chr13 108447746 108447854 -11836458 + MER5B DNA MER1_type 2 125 -53 6 1412 1614 213 22 53 chr13 108447854 108448211 -11836101 - MTD LTR MaLR 0 419 74 6 1412 231 297 20 71 chr13 108448187 108448285 -11836027 + PB1D7 SINE Alu 28 120 0 6 1412 216 269 30 0 chr13 108448286 108448353 -11835959 + GA-rich Low_complexity Low_complexity 6 74 0 6 1412 1404 169 0 4 chr13 108448860 108449086 -11835226 - URR1B DNA MER1_type 0 225 1 6 1412 400 250 193 45 chr13 108449808 108449984 -11834328 - MTE2b LTR MaLR -4 375 174 6 1412 8048 30 0 0 chr13 108450174 108451099 -11833213 + L1Md_T LINE L1 5658 6582 0 6 1412 251 206 203 14 chr13 108451195 108451264 -11833048 + L2b LINE L2 3292 3373 -2 6 1412 305 62 21 0 chr13 108452211 108452259 -11832053 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1412 1019 59 29 12 chr13 108452271 108452442 -11831870 + (TG)n Simple_repeat Simple_repeat 1 174 0 6 1412 240 306 65 99 chr13 108452470 108452672 -11831640 + MIR SINE MIR 18 225 -37 6 1412 407 304 85 50 chr13 108452742 108452943 -11831369 + MIRb SINE MIR 21 228 -40 6 1412 216 182 0 0 chr13 108452983 108453027 -11831285 + (CAT)n Simple_repeat Simple_repeat 1 44 0 6 1412 348 209 0 0 chr13 108455064 108455150 -11829162 + GA-rich Low_complexity Low_complexity 3 88 0 6 1412 435 137 0 0 chr13 108458295 108458368 -11825944 + (GGGA)n Simple_repeat Simple_repeat 4 76 0 6 1412 1307 249 55 0 chr13 108458373 108458662 -11825650 - MTEa LTR MaLR -60 319 15 6 1412 181 358 108 0 chr13 108458800 108458920 -11825392 - MIR SINE MIR -32 230 98 6 1412 392 141 26 0 chr13 108458937 108459015 -11825297 + G-rich Low_complexity Low_complexity 3 82 0 6 1412 226 294 83 56 chr13 108459240 108459348 -11824964 - MIRb SINE MIR -141 127 17 6 1412 6548 110 11 21 chr13 108460283 108460831 -11823481 - RMER17B LTR ERVK 0 958 411 6 1412 1163 56 7 27 chr13 108460831 108460979 -11823333 + B1_Mus2 SINE Alu 1 145 -2 6 1412 6548 110 11 21 chr13 108460979 108461397 -11822915 - RMER17B LTR ERVK -548 410 1 6 1412 444 287 44 39 chr13 108461444 108461625 -11822687 - MER5A DNA MER1_type 0 189 8 6 1412 602 132 0 11 chr13 108461712 108461804 -11822508 + B1_Mur2 SINE Alu 54 144 -5 6 1412 484 343 96 93 chr13 108462374 108462968 -11821344 + Tigger13a DNA MER2_type 22 617 -154 6 1412 231 367 23 30 chr13 108463474 108463569 -11820743 + MLT1K LTR MaLR 399 493 -102 6 1412 1390 99 21 0 chr13 108463569 108463760 -11820552 - B2_Mm2 SINE B2 0 195 1 6 1412 231 367 23 30 chr13 108463760 108463796 -11820516 + MLT1K LTR MaLR 494 529 -66 6 1412 1678 173 24 61 chr13 108464142 108464566 -11819746 + RMER17C LTR ERVK 1 408 -2 6 1412 1088 45 0 43 chr13 108464936 108465076 -11819236 + B1_Mm SINE Alu 1 134 -13 6 1412 1172 116 9 99 chr13 108465241 108465452 -11818860 - B2_Mm1t SINE B2 0 193 2 6 1412 271 316 30 20 chr13 108466595 108466695 -11817617 - MER121 Unknown Unknown -37 375 275 6 1412 202 182 0 0 chr13 108466809 108466842 -11817470 + G-rich Low_complexity Low_complexity 1 33 0 6 1412 362 322 46 23 chr13 108467222 108467419 -11816893 - MIRb SINE MIR -39 229 29 6 1412 26 50 0 0 chr13 108467730 108467770 -11816542 + AT_rich Low_complexity Low_complexity 1 40 0 6 1412 1169 43 7 7 chr13 108467787 108467929 -11816383 + B1_Mm SINE Alu 1 142 -5 6 1412 180 162 81 0 chr13 108467944 108467981 -11816331 - MER5B DNA MER1_type -45 133 94 6 1412 208 250 16 48 chr13 108467949 108468012 -11816300 - MER5A DNA MER1_type -50 139 79 6 1412 402 250 100 0 chr13 108468376 108468476 -11815836 - B3A SINE B2 -22 176 67 6 1412 491 301 75 5 chr13 108468617 108468817 -11815495 - Cheshire DNA MER1_type -102 2318 2105 6 1412 673 301 175 56 chr13 108469400 108469812 -11814500 + MLT1C LTR MaLR 6 466 -1 6 1412 366 108 0 0 chr13 108470036 108470101 -11814211 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1412 489 110 0 0 chr13 108470110 108470183 -11814129 + (GA)n Simple_repeat Simple_repeat 2 74 0 6 1412 552 254 30 15 chr13 108470324 108470456 -11813856 - B3A SINE B2 -63 135 2 6 1412 258 32 0 0 chr13 108470557 108470588 -11813724 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1412 256 303 89 16 chr13 108471649 108471773 -11812539 + MER5B DNA MER1_type 16 148 -30 7 1412 504 0 0 0 chr13 108473349 108473405 -11810907 + (TG)n Simple_repeat Simple_repeat 2 57 0 7 1412 182 296 69 14 chr13 108473470 108473542 -11810770 + MIRm SINE MIR 196 271 -5 7 1412 404 275 71 45 chr13 108473656 108473854 -11810458 - L2b LINE L2 -243 3132 2930 7 1412 555 308 144 43 chr13 108473990 108474366 -11809946 + MLT2D LTR ERVL 1 414 0 7 1412 348 24 0 0 chr13 108474460 108474501 -11809811 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 7 1412 236 130 37 0 chr13 108475273 108475327 -11808985 + (TCTCTG)n Simple_repeat Simple_repeat 6 61 0 7 1412 189 0 0 0 chr13 108475335 108475356 -11808956 + (TG)n Simple_repeat Simple_repeat 1 21 0 7 1412 303 49 0 0 chr13 108475368 108475409 -11808903 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 7 1412 268 328 34 0 chr13 108475409 108475528 -11808784 + MLT1G3 LTR MaLR 248 370 -225 7 1412 884 232 153 35 chr13 108476219 108476474 -11807838 + B4 SINE B4 5 289 -3 7 1412 201 179 0 25 chr13 108476843 108476883 -11807429 + CT-rich Low_complexity Low_complexity 4 42 0 7 1412 279 0 0 0 chr13 108476883 108476914 -11807398 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1412 987 83 0 0 chr13 108476914 108477046 -11807266 - B1_Mus1 SINE Alu -9 139 8 7 1412 225 154 0 0 chr13 108478077 108478116 -11806196 + CT-rich Low_complexity Low_complexity 3 41 0 7 1412 671 140 23 8 chr13 108478214 108478344 -11805968 - L1Md_F3 LINE L1 -1 6583 6452 7 1412 344 329 88 60 chr13 108478528 108478745 -11805567 + MLT1L LTR MaLR 214 436 -174 7 1412 416 126 11 0 chr13 108480207 108480294 -11804018 + (TTGG)n Simple_repeat Simple_repeat 4 91 0 7 1412 197 59 0 56 chr13 108480477 108480513 -11803799 + (TCTCTG)n Simple_repeat Simple_repeat 3 36 0 7 1412 372 59 0 0 chr13 108480523 108480574 -11803738 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 1412 507 321 25 13 chr13 108480892 108481050 -11803262 + B4A SINE B4 133 292 0 7 1412 264 329 0 0 chr13 108481529 108481599 -11802713 - ID4 SINE ID -12 71 2 7 1412 197 139 23 0 chr13 108483113 108483156 -11801156 + (TGGA)n Simple_repeat Simple_repeat 3 46 0 7 1412 535 283 22 7 chr13 108484463 108484602 -11799710 + B1F SINE Alu 1 141 -8 7 1412 287 313 0 0 chr13 108484617 108484684 -11799628 + ID4 SINE ID 2 68 -15 7 1412 459 0 0 0 chr13 108484743 108484794 -11799518 + (CA)n Simple_repeat Simple_repeat 2 52 0 7 1412 1114 121 44 44 chr13 108485373 108485554 -11798758 + B2_Mm2 SINE B2 2 182 -13 7 1412 1729 155 19 182 chr13 108485798 108486231 -11798081 + ORR1B2 LTR MaLR 1 362 -5 7 1412 293 333 108 31 chr13 108486556 108486751 -11797561 - MER63A DNA AcHobo 0 210 1 7 1412 201 196 0 0 chr13 108487287 108487343 -11796969 + (TG)n Simple_repeat Simple_repeat 1 56 0 7 1412 2751 142 19 100 chr13 108487479 108488049 -11796263 + RLTR28 LTR ERVL 1 524 0 7 1412 1131 211 5 14 chr13 108488104 108488316 -11795996 + B3 SINE B2 1 210 -6 7 1412 243 300 0 14 chr13 108488862 108488933 -11795379 - ID_B1 SINE B4 -4 220 151 7 1412 316 299 144 52 chr13 108489477 108489671 -11794641 + MLT1J LTR MaLR 69 280 -232 7 1412 369 0 0 0 chr13 108490753 108490794 -11793518 + (TG)n Simple_repeat Simple_repeat 1 41 0 7 1412 265 350 112 32 chr13 108492005 108492415 -11791897 + L2a LINE L2 2960 3402 -24 7 1412 891 291 66 15 chr13 108492588 108492916 -11791396 - MLT1C LTR MaLR -71 396 25 7 1412 414 202 94 12 chr13 108492920 108493005 -11791307 + B1_Mus1 SINE Alu 1 92 -57 7 1412 3918 82 87 2 chr13 108495037 108495575 -11788737 + MT2B2 LTR ERVL 1 584 0 7 1412 367 314 33 44 chr13 108496057 108496237 -11788075 - Lx8 LINE L1 -247 7226 7049 7 1412 979 231 145 81 chr13 108496242 108496353 -11787959 + ORR1D2 LTR MaLR 3 102 -268 7 1412 1224 61 0 0 chr13 108496353 108496500 -11787812 - B1_Mus1 SINE Alu 0 148 2 7 1412 979 231 145 81 chr13 108496500 108496591 -11787721 + ORR1D2 LTR MaLR 103 194 -176 7 1412 573 15 0 0 chr13 108496591 108496657 -11787655 + (TG)n Simple_repeat Simple_repeat 2 67 0 7 1412 979 231 145 81 chr13 108496657 108496797 -11787515 + ORR1D2 LTR MaLR 195 367 -3 7 1412 1093 306 58 27 chr13 108496811 108497258 -11787054 - Lx8 LINE L1 -435 7038 6578 7 1412 380 281 136 45 chr13 108497677 108497875 -11786437 + MER20 DNA MER1_type 4 219 0 7 1412 248 292 48 127 chr13 108498088 108498253 -11786059 - L2b LINE L2 -20 3355 3204 7 1412 251 346 23 2 chr13 108498682 108498795 -11785517 - MIRc SINE MIR -87 175 57 7 1412 228 292 0 0 chr13 108499144 108499257 -11785055 + (TG)n Simple_repeat Simple_repeat 1 113 0 7 1412 429 116 0 0 chr13 108499367 108499436 -11784876 + (TG)n Simple_repeat Simple_repeat 1 69 0 7 1412 2047 144 15 93 chr13 108500018 108500415 -11783897 + ORR1B2 LTR MaLR 2 367 0 1 1412 1177 75 0 0 chr13 108502773 108502920 -11781392 - B1_Mus2 SINE Alu 0 147 1 2 1412 589 338 37 44 chr13 108502928 108503222 -11781090 - B4A SINE B4 0 292 1 3 1412 2341 67 3 0 chr13 108503913 108504229 -11780083 + ORR1A2 LTR MaLR 11 327 0 4 1412 2021 153 15 88 chr13 108505455 108505863 -11778449 - ORR1C1 LTR MaLR 0 378 1 5 1412 228 266 0 0 chr13 108506156 108506265 -11778047 + (TG)n Simple_repeat Simple_repeat 2 110 0 6 1412 774 183 37 74 chr13 108506292 108506481 -11777831 - B3A SINE B2 -16 182 1 7 1412 476 248 87 111 chr13 108507216 108507560 -11776752 - L1M7 LINE L1 -5319 899 564 8 1412 216 195 51 13 chr13 108507729 108507807 -11776505 + CT-rich Low_complexity Low_complexity 1 81 0 9 1412 487 257 16 114 chr13 108507883 108508076 -11776236 - ID_B1 SINE B4 -48 176 3 1 1412 622 273 142 54 chr13 108508594 108508834 -11775478 + B4 SINE B4 8 268 -24 1 1412 339 89 0 0 chr13 108510389 108510445 -11773867 + (CA)n Simple_repeat Simple_repeat 2 57 0 1 1412 224 294 128 21 chr13 108512040 108512228 -11772084 + L2a LINE L2 2396 2603 -816 1 1412 894 279 107 29 chr13 108513742 108514192 -11770120 + L1MB2 LINE L1 5630 6114 -57 1 1412 195 270 90 51 chr13 108514533 108514611 -11769701 + L2a LINE L2 3342 3422 -4 1 1412 207 0 0 0 chr13 108516278 108516301 -11768011 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1 1412 333 0 0 0 chr13 108522846 108522883 -11761429 + (CA)n Simple_repeat Simple_repeat 2 38 0 1 1412 381 58 0 0 chr13 108522883 108522935 -11761377 + (GA)n Simple_repeat Simple_repeat 1 52 0 1 1412 21 0 0 0 chr13 108523161 108523182 -11761130 + AT_rich Low_complexity Low_complexity 1 21 0 1 1412 1487 302 90 53 chr13 108525493 108526305 -11758007 + Lx8 LINE L1 6549 7390 -83 1 1412 21 0 0 0 chr13 108527118 108527139 -11757173 + AT_rich Low_complexity Low_complexity 1 21 0 2 1413 1165 82 0 0 chr13 108528902 108529048 -11755264 - B1_Mus2 SINE Alu -1 146 1 2 1413 921 166 192 6 chr13 108530030 108530212 -11754100 + B3 SINE B2 1 216 0 2 1413 23 0 0 0 chr13 108532357 108532380 -11751932 + AT_rich Low_complexity Low_complexity 1 23 0 2 1413 2334 61 109 0 chr13 108532466 108532778 -11751534 + ORR1A1 LTR MaLR 1 346 0 2 1413 246 222 16 0 chr13 108533408 108533471 -11750841 - B3 SINE B2 0 216 153 2 1413 372 152 0 0 chr13 108536263 108536329 -11747983 + GA-rich Low_complexity Low_complexity 3 68 0 2 1413 852 251 23 33 chr13 108536775 108536989 -11747323 - B3 SINE B2 -1 215 4 2 1413 225 266 108 48 chr13 108539004 108539087 -11745225 + PB1 SINE Alu 1 88 -39 2 1413 26 0 0 0 chr13 108539357 108539383 -11744929 + AT_rich Low_complexity Low_complexity 1 26 0 2 1413 261 281 68 26 chr13 108539726 108539843 -11744469 + L1MEf LINE L1 67 188 -6054 3 1413 523 307 171 60 chr13 108540211 108540756 -11743556 + L1MEf LINE L1 708 1343 -4899 3 1413 883 15 45 8 chr13 108540756 108540888 -11743424 + (CAAAC)n Simple_repeat Simple_repeat 2 138 0 3 1413 523 307 171 60 chr13 108540888 108541652 -11742660 + L1MEf LINE L1 1344 2161 -4081 3 1413 216 258 129 0 chr13 108541662 108541724 -11742588 + BC1_Mm scRNA scRNA 11 80 -72 3 1413 277 232 135 10 chr13 108542026 108542122 -11742190 + L1MEf LINE L1 2538 2645 -3501 3 1413 364 241 113 0 chr13 108542110 108542301 -11742011 + L1MEf LINE L1 4981 5200 -946 3 1413 457 350 23 52 chr13 108542405 108542754 -11741558 + L1MC1 LINE L1 5868 6206 -127 3 1413 234 0 0 0 chr13 108542891 108542917 -11741395 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 3 1413 234 250 0 0 chr13 108542917 108542969 -11741343 + L1M5 LINE L1 5393 5444 -735 3 1413 261 83 0 0 chr13 108543143 108543179 -11741133 + (CAA)n Simple_repeat Simple_repeat 2 37 0 3 1413 270 329 112 79 chr13 108543557 108543834 -11740478 - MLT1A0 LTR MaLR -72 293 8 3 1413 737 235 175 0 chr13 108544618 108544886 -11739426 + ORR1D2 LTR MaLR 1 315 -55 3 1413 815 223 45 83 chr13 108544888 108545164 -11739148 + ORR1D2-int LTR MaLR 823 1232 -348 3 1413 574 208 52 36 chr13 108545154 108545325 -11738987 + ORR1D2-int LTR MaLR 1197 1527 -53 3 1413 232 294 0 0 chr13 108545325 108545393 -11738919 + ORR1D2 LTR MaLR 1 68 -302 3 1413 1701 117 156 3 chr13 108545393 108545675 -11738637 - ORR1A3 LTR MaLR -1 325 1 3 1413 505 160 180 23 chr13 108545701 108545722 -11738590 - B1_Mur2 SINE Alu 0 149 131 4 1413 2395 110 3 0 chr13 108545722 108546048 -11738264 - ORR1A2 LTR MaLR 0 327 1 4 1413 477 0 0 0 chr13 108546053 108546106 -11738206 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1413 505 160 180 23 chr13 108546106 108546206 -11738106 - B1_Mur2 SINE Alu -27 122 4 4 1413 297 211 13 66 chr13 108546206 108546282 -11738030 + ORR1D2 LTR MaLR 32 103 -267 3 1413 237 333 23 11 chr13 108547223 108547311 -11737001 + MER20 DNA MER1_type 88 176 -43 4 1413 562 219 218 6 chr13 108548080 108548120 -11736192 - B3 SINE B2 -2 214 175 4 1413 372 43 0 0 chr13 108548120 108548166 -11736146 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1413 562 219 218 6 chr13 108548166 108548295 -11736017 - B3 SINE B2 -42 174 10 4 1413 33 73 0 0 chr13 108551254 108551322 -11732990 + AT_rich Low_complexity Low_complexity 1 68 0 4 1413 297 197 0 0 chr13 108551479 108551540 -11732772 + (CA)n Simple_repeat Simple_repeat 2 62 0 4 1413 814 156 257 0 chr13 108552726 108552905 -11731407 + URR1B DNA MER1_type 1 225 0 4 1413 290 319 13 77 chr13 108554271 108554427 -11729885 + MIRb SINE MIR 84 229 -39 4 1413 207 125 0 0 chr13 108554503 108554543 -11729769 + (CCA)n Simple_repeat Simple_repeat 1 40 0 5 1413 217 231 0 0 chr13 108557903 108557955 -11726357 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1413 208 77 51 0 chr13 108558181 108558220 -11726092 + (TTTC)n Simple_repeat Simple_repeat 3 43 0 5 1413 21 0 0 0 chr13 108559052 108559073 -11725239 + AT_rich Low_complexity Low_complexity 1 21 0 5 1413 384 281 0 37 chr13 108559977 108560084 -11724228 - PB1D10 SINE Alu -14 103 1 5 1413 242 214 93 93 chr13 108562492 108562600 -11721712 - B4A SINE B4 -17 275 168 5 1413 3186 108 6 37 chr13 108564500 108564990 -11719322 - IAPLTR2_Mm LTR ERVK 0 475 1 5 1413 324 0 0 0 chr13 108565348 108565384 -11718928 + (TG)n Simple_repeat Simple_repeat 2 37 0 5 1413 256 317 24 31 chr13 108565944 108566071 -11718241 + L1MC LINE L1 5781 5906 -1976 5 1413 325 294 0 0 chr13 108567442 108567534 -11716778 + GA-rich Low_complexity Low_complexity 1 92 0 5 1413 21 57 0 0 chr13 108567877 108567912 -11716400 + AT_rich Low_complexity Low_complexity 1 35 0 6 1413 23 33 0 0 chr13 108568321 108568351 -11715961 + AT_rich Low_complexity Low_complexity 1 30 0 6 1413 185 237 0 0 chr13 108568758 108568796 -11715516 + MER5A DNA MER1_type 68 105 -84 6 1413 283 266 63 0 chr13 108569183 108569262 -11715050 - RSINE1 SINE B4 -80 85 2 6 1413 29 28 0 0 chr13 108571370 108571406 -11712906 + AT_rich Low_complexity Low_complexity 1 36 0 6 1413 1263 87 0 0 chr13 108572259 108572481 -11711831 + (TG)n Simple_repeat Simple_repeat 1 222 0 6 1413 28 29 0 0 chr13 108572646 108572681 -11711631 + AT_rich Low_complexity Low_complexity 1 35 0 6 1413 272 257 28 14 chr13 108573144 108573215 -11711097 - RSINE1 SINE B4 -10 155 84 6 1413 375 221 36 55 chr13 108573512 108573622 -11710690 - PB1D10 SINE Alu -9 108 1 6 1413 369 0 0 0 chr13 108574813 108574854 -11709458 + (GA)n Simple_repeat Simple_repeat 2 42 0 6 1413 201 94 0 0 chr13 108574855 108574887 -11709425 + (CGGA)n Simple_repeat Simple_repeat 2 33 0 7 1413 954 112 270 0 chr13 108574929 108575107 -11709205 - URR1A DNA MER1_type 0 226 1 7 1413 229 170 64 0 chr13 108575431 108575478 -11708834 + L1M5 LINE L1 5665 5714 -526 7 1413 1236 48 0 0 chr13 108575862 108576009 -11708303 + B1_Mus2 SINE Alu 1 147 0 7 1413 25 31 0 0 chr13 108576051 108576083 -11708229 + AT_rich Low_complexity Low_complexity 1 32 0 7 1413 797 265 36 29 chr13 108576755 108576829 -11707483 - B4 SINE B4 -6 286 217 7 1413 324 0 0 0 chr13 108576829 108576865 -11707447 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1413 797 265 36 29 chr13 108576865 108577070 -11707242 - B4 SINE B4 -76 216 5 7 1413 348 88 0 0 chr13 108577460 108577517 -11706795 + (CAAAG)n Simple_repeat Simple_repeat 2 58 0 7 1413 244 268 72 126 chr13 108577546 108577657 -11706655 + PB1D10 SINE Alu 1 105 -12 7 1413 1207 79 22 0 chr13 108579579 108579757 -11704555 + B2_Mm2 SINE B2 6 187 -8 7 1413 219 245 0 0 chr13 108580366 108580415 -11703897 + (CA)n Simple_repeat Simple_repeat 2 50 0 8 1413 486 222 26 44 chr13 108581545 108581658 -11702654 + PB1D9 SINE Alu 3 113 -7 8 1413 182 62 31 0 chr13 108581658 108581690 -11702622 + (CAA)n Simple_repeat Simple_repeat 2 34 0 8 1413 649 254 105 19 chr13 108583306 108583563 -11700749 + L1_Mur2 LINE L1 4674 4952 -925 8 1413 489 34 0 0 chr13 108583574 108583633 -11700679 + (CCA)n Simple_repeat Simple_repeat 3 61 0 8 1413 338 47 234 0 chr13 108583968 108584096 -11700216 + (GGCTG)n Simple_repeat Simple_repeat 1 158 0 8 1413 279 133 0 0 chr13 108584515 108584560 -11699752 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 8 1413 637 323 45 43 chr13 108584626 108585024 -11699288 + L1MA5 LINE L1 5429 5827 -473 8 1413 516 169 34 236 chr13 108585042 108585220 -11699092 + B1_Mur4 SINE Alu 1 142 -8 8 1413 313 276 124 30 chr13 108585734 108585936 -11698376 + MIRb SINE MIR 33 253 -15 8 1413 199 105 25 50 chr13 108585902 108585942 -11698370 + L2c LINE L2 3337 3375 -12 9 1413 1382 220 22 129 chr13 108586678 108586893 -11697419 - MTD LTR MaLR -16 403 235 9 1413 1185 41 14 0 chr13 108586893 108587038 -11697274 - B1_Mus1 SINE Alu -1 147 1 9 1413 1382 220 22 129 chr13 108587038 108587271 -11697041 - MTD LTR MaLR -185 234 3 9 1413 640 246 35 55 chr13 108587456 108587658 -11696654 - B3A SINE B2 0 198 1 9 1413 225 151 0 0 chr13 108588186 108588239 -11696073 + A-rich Low_complexity Low_complexity 1 53 0 9 1413 1188 157 57 5 chr13 108590108 108590319 -11693993 + URR1A DNA MER1_type 5 226 0 9 1413 207 250 32 64 chr13 108590842 108590936 -11693376 - MER5A DNA MER1_type -2 187 97 9 1413 223 268 152 38 chr13 108591623 108591755 -11692557 + MIRb SINE MIR 71 217 -51 9 1413 424 323 0 8 chr13 108594562 108594693 -11689619 + ID_B1 SINE B4 87 216 -8 9 1413 586 295 52 0 chr13 108594764 108594937 -11689375 - B3A SINE B2 -13 185 4 9 1413 1235 28 0 14 chr13 108596030 108596177 -11688135 - B1_Mm SINE Alu -1 146 2 1 1413 388 242 101 0 chr13 108598193 108598292 -11686020 - Lx9 LINE L1 -928 6716 6608 1 1413 342 0 0 0 chr13 108598302 108598340 -11685972 + (CATA)n Simple_repeat Simple_repeat 1 38 0 1 1413 386 201 79 107 chr13 108598340 108598518 -11685794 + Lx9 LINE L1 7432 7604 -40 1 1413 672 285 169 45 chr13 108599236 108599813 -11684499 + L1MD3 LINE L1 6744 7372 -623 1 1413 398 279 39 0 chr13 108599834 108599963 -11684349 + L1MA8 LINE L1 6108 6241 -50 1 1413 318 307 48 6 chr13 108600395 108600562 -11683750 + L1MD3 LINE L1 7594 7767 -115 1 1413 268 302 78 44 chr13 108601751 108601943 -11682369 + L2b LINE L2 3184 3387 0 1 1413 200 34 0 33 chr13 108602716 108602746 -11681566 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1413 248 418 9 26 chr13 108603259 108603372 -11680940 + L2c LINE L2 3277 3387 0 1 1413 180 0 0 0 chr13 108604243 108604263 -11680049 + (G)n Simple_repeat Simple_repeat 1 20 0 1 1413 892 285 58 0 chr13 108604970 108605244 -11679068 - B4A SINE B4 -2 290 1 1 1413 217 0 61 0 chr13 108605626 108605659 -11678653 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1413 776 134 0 8 chr13 108605667 108605787 -11678525 - PB1D9 SINE Alu -1 119 1 1 1413 2093 143 160 43 chr13 108606323 108606785 -11677527 + RMER15 LTR ERVL 60 575 0 1 1413 180 97 0 0 chr13 108606890 108606921 -11677391 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1413 21 71 0 0 chr13 108607428 108607470 -11676842 + AT_rich Low_complexity Low_complexity 1 42 0 1 1413 601 270 90 0 chr13 108608680 108608858 -11675454 + Lx8 LINE L1 6911 7104 -369 1 1413 279 0 0 0 chr13 108608875 108608906 -11675406 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1413 262 192 49 148 chr13 108608907 108609029 -11675283 + Lx8 LINE L1 7356 7465 -8 1 1413 201 74 0 0 chr13 108609794 108609821 -11674491 + (GGAA)n Simple_repeat Simple_repeat 2 28 0 1 1413 377 198 245 0 chr13 108610377 108610483 -11673829 + B1F SINE Alu 17 148 -1 1 1413 461 253 178 32 chr13 108610541 108610794 -11673518 + B4A SINE B4 1 290 -2 1 1413 1092 265 109 36 chr13 108610908 108611460 -11672852 + L1MA6 LINE L1 5673 6264 -36 1 1413 1222 79 0 0 chr13 108612713 108612878 -11671434 + L1_Mus1 LINE L1 6403 6567 0 1 1413 936 96 0 0 chr13 108612903 108613049 -11671263 + (GGAA)n Simple_repeat Simple_repeat 3 148 0 1 1413 215 74 35 53 chr13 108613476 108613533 -11670779 + (CAAA)n Simple_repeat Simple_repeat 1 56 0 1 1413 284 211 144 0 chr13 108613545 108613635 -11670677 + PB1D7 SINE Alu 18 120 0 1 1413 207 0 0 0 chr13 108613746 108613769 -11670543 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1413 666 317 69 22 chr13 108614155 108614616 -11669696 + L1MC4 LINE L1 7168 7650 -392 1 1413 578 304 7 0 chr13 108614944 108615079 -11669233 + RSINE1 SINE B4 9 144 -21 1 1413 509 318 32 0 chr13 108615282 108615436 -11668876 - B3A SINE B2 -38 160 2 1 1413 1021 128 35 0 chr13 108615615 108615787 -11668525 - URR1A DNA MER1_type -13 213 36 1 1413 318 286 202 0 chr13 108616472 108616640 -11667672 + MER3 DNA MER1_type 7 208 -1 1 1413 399 222 35 69 chr13 108617789 108617905 -11666407 + PB1D9 SINE Alu 1 112 -8 1 1413 343 198 21 32 chr13 108617931 108618025 -11666287 + B4A SINE B4 1 93 -199 1 1413 297 0 0 0 chr13 108618039 108618072 -11666240 + (CA)n Simple_repeat Simple_repeat 2 34 0 1 1413 279 300 0 0 chr13 108618378 108618458 -11665854 - LTR90B LTR LTR -21 775 696 1 1413 829 329 41 67 chr13 108618498 108619032 -11665280 + MT2A LTR ERVL 12 531 -2 1 1413 854 78 0 43 chr13 108619416 108619577 -11664735 + (GAA)n Simple_repeat Simple_repeat 1 154 0 1 1413 489 17 0 0 chr13 108619577 108619635 -11664677 + (CAG)n Simple_repeat Simple_repeat 1 58 0 1 1413 243 0 0 0 chr13 108619662 108619689 -11664623 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1 1413 1127 22 15 0 chr13 108619689 108619823 -11664489 - B1_Mus2 SINE Alu -10 137 2 1 1413 1547 52 5 10 chr13 108620318 108620511 -11663801 - B2_Mm2 SINE B2 -3 192 1 1 1413 189 74 0 0 chr13 108621456 108621483 -11662829 + (CCCCG)n Simple_repeat Simple_repeat 2 28 0 1 1413 247 229 0 0 chr13 108622228 108622276 -11662036 + ID_B1 SINE B4 158 205 -19 1 1413 687 257 21 11 chr13 108622712 108622901 -11661411 + B3A SINE B2 3 193 -5 1 1413 520 331 6 38 chr13 108622931 108623088 -11661224 - RSINE1 SINE B4 -6 159 8 1 1413 498 175 61 0 chr13 108623092 108623206 -11661106 + ORR1B2 LTR MaLR 1 121 -246 1 1413 781 150 0 0 chr13 108623203 108623330 -11660982 + ORR1B2 LTR MaLR 241 367 0 1 1413 691 264 56 0 chr13 108623393 108623590 -11660722 + B3 SINE B2 1 208 -8 1 1413 234 174 0 0 chr13 108625898 108625944 -11658368 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1413 708 168 16 0 chr13 108625988 108626113 -11658199 - B3 SINE B2 -86 130 4 1 1413 24 0 0 0 chr13 108626827 108626851 -11657461 + AT_rich Low_complexity Low_complexity 1 24 0 1 1413 279 0 0 0 chr13 108627441 108627472 -11656840 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1413 630 262 108 12 chr13 108628455 108628695 -11655617 + Lx8 LINE L1 6812 7074 -399 1 1413 244 278 59 112 chr13 108628727 108628897 -11655415 + Lx8 LINE L1 7288 7448 -25 1 1413 338 195 0 13 chr13 108628901 108628979 -11655333 + (CATATA)n Simple_repeat Simple_repeat 6 82 0 1 1413 284 294 36 27 chr13 108631299 108631411 -11652901 - PB1D9 SINE Alu -7 113 1 1 1413 23 33 0 0 chr13 108634945 108634975 -11649337 + AT_rich Low_complexity Low_complexity 1 30 0 1 1413 321 287 24 32 chr13 108638111 108638237 -11646075 - MIRb SINE MIR -136 132 8 1 1413 236 181 160 40 chr13 108638746 108638821 -11645491 + B3 SINE B2 2 85 -131 1 1413 490 286 89 6 chr13 108640682 108640861 -11643451 - B3A SINE B2 -3 195 2 1 1413 290 289 0 67 chr13 108642188 108642277 -11642035 - RSINE1 SINE B4 -2 163 81 1 1413 1263 280 114 33 chr13 108643375 108644006 -11640306 - Lx9 LINE L1 -4 7640 6959 1 1413 5977 179 53 47 chr13 108644269 108645555 -11638757 + Lx9 LINE L1 6352 7644 0 1 1413 180 0 0 0 chr13 108645605 108645625 -11638687 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1413 2250 158 38 31 chr13 108645637 108646055 -11638257 + MTC LTR MaLR 1 421 0 1 1413 180 349 83 0 chr13 108646174 108646283 -11638029 - L2 LINE L2 -495 2924 2807 1 1413 189 94 0 0 chr13 108647580 108647612 -11636700 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1413 259 296 100 18 chr13 108648181 108648291 -11636021 + PB1D7 SINE Alu 2 120 0 1 1413 212 0 36 0 chr13 108648366 108648394 -11635918 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 1 1413 1178 54 0 26 chr13 108650567 108650718 -11633594 + B1_Mus1 SINE Alu 2 148 0 1 1413 402 57 0 0 chr13 108651961 108652014 -11632298 + (TG)n Simple_repeat Simple_repeat 1 53 0 1 1413 309 269 0 25 chr13 108652799 108652879 -11631433 + RSINE1 SINE B4 4 81 -84 1 1413 183 234 106 0 chr13 108653169 108653216 -11631096 + L4 LINE RTE 1689 1740 -289 1 1413 303 255 77 70 chr13 108653606 108653762 -11630550 - Tigger15a DNA TcMar -245 470 314 1 1413 359 232 97 9 chr13 108654855 108654968 -11629344 - MER58B DNA MER1_type -9 332 210 1 1413 312 291 130 60 chr13 108654993 108655278 -11629034 + MLT1A0 LTR MaLR 54 358 -7 1 1413 390 293 34 107 chr13 108655261 108655494 -11628818 - MER58B DNA MER1_type -107 234 19 1 1413 315 264 43 43 chr13 108655793 108655908 -11628404 - PB1D10 SINE Alu -1 116 2 1 1413 252 326 48 28 chr13 108656389 108656534 -11627778 + MER112 DNA MER1_type 21 168 -93 1 1413 279 0 0 0 chr13 108656546 108656577 -11627735 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1413 192 77 0 0 chr13 108657303 108657329 -11626983 + (CAAAG)n Simple_repeat Simple_repeat 4 29 0 1 1413 21 0 0 0 chr13 108657648 108657669 -11626643 + AT_rich Low_complexity Low_complexity 1 21 0 1 1413 441 116 0 0 chr13 108658335 108658404 -11625908 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 176 334 326 10 10 chr13 108658620 108658719 -11625593 + LTR33A_ LTR ERVL 83 181 -350 1 1414 275 240 119 10 chr13 108658973 108659074 -11625238 + LTR33A_ LTR ERVL 383 494 -9 1 1414 420 309 79 44 chr13 108659560 108659763 -11624549 + LTR33A_ LTR ERVL 1 210 -321 1 1414 296 273 196 8 chr13 108659966 108660099 -11624213 - MER5A DNA MER1_type -30 159 2 1 1414 244 182 228 137 chr13 108660642 108660897 -11623415 - MER33 DNA MER1_type -31 293 16 1 1414 22 0 0 0 chr13 108661420 108661442 -11622870 + AT_rich Low_complexity Low_complexity 1 22 0 1 1414 220 296 69 46 chr13 108663856 108663987 -11620325 - L2b LINE L2 -1 3374 3241 1 1414 444 150 0 0 chr13 108664336 108664416 -11619896 + (TG)n Simple_repeat Simple_repeat 1 80 0 1 1414 372 211 47 47 chr13 108666034 108666141 -11618171 + PB1D10 SINE Alu 2 108 -9 1 1414 355 252 32 65 chr13 108666528 108666651 -11617661 - PB1D9 SINE Alu -1 119 1 1 1414 998 208 29 10 chr13 108666921 108667130 -11617182 + B3 SINE B2 1 213 -3 1 1414 218 296 47 58 chr13 108667352 108667438 -11616874 + BC1_Mm scRNA scRNA 1 85 -67 1 1414 272 340 18 9 chr13 108668279 108668389 -11615923 + PB1D10 SINE Alu 2 112 -5 1 1414 389 257 38 0 chr13 108668437 108668542 -11615770 + PB1D10 SINE Alu 2 110 -7 1 1414 1131 56 14 14 chr13 108669020 108669166 -11615146 + B1_Mus2 SINE Alu 1 146 -1 1 1414 24 0 0 0 chr13 108669680 108669704 -11614608 + AT_rich Low_complexity Low_complexity 1 24 0 1 1414 273 294 0 21 chr13 108669930 108670024 -11614288 + G-rich Low_complexity Low_complexity 1 92 0 1 1414 802 181 8 0 chr13 108670417 108670550 -11613762 + B1_Mus2 SINE Alu 1 134 -13 1 1414 1118 208 19 0 chr13 108670829 108671041 -11613271 + B3 SINE B2 1 216 0 1 1414 799 256 32 11 chr13 108671062 108671248 -11613064 + B3 SINE B2 27 216 0 1 1414 493 134 3 54 chr13 108672040 108672134 -11612178 + B1_Mus2 SINE Alu 33 147 0 2 1414 440 275 20 61 chr13 108672908 108673055 -11611257 + B1F SINE Alu 1 141 -8 2 1414 249 33 0 0 chr13 108673127 108673157 -11611155 + (CACG)n Simple_repeat Simple_repeat 1 30 0 2 1414 268 333 10 30 chr13 108673288 108673313 -11610999 + ID SINE ID 61 83 -141 2 1414 320 253 154 0 chr13 108673313 108673404 -11610908 + PB1D10 SINE Alu 2 106 -14 2 1414 263 273 26 0 chr13 108674651 108674728 -11609584 + ID4 SINE ID 3 81 -2 2 1414 216 0 0 0 chr13 108674807 108674831 -11609481 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1414 1137 282 47 4 chr13 108674888 108675162 -11609150 - B4A SINE B4 0 292 7 2 1414 222 37 0 0 chr13 108675715 108675742 -11608570 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1414 590 232 71 14 chr13 108676151 108676291 -11608021 - B1_Mur1 SINE Alu 0 149 2 2 1414 369 0 0 0 chr13 108678243 108678284 -11606028 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1414 183 80 0 0 chr13 108679034 108679059 -11605253 + (CCGG)n Simple_repeat Simple_repeat 2 26 0 2 1414 222 226 23 35 chr13 108679204 108679291 -11605021 + C-rich Low_complexity Low_complexity 6 91 0 2 1414 207 114 0 0 chr13 108679715 108679750 -11604562 + (CGG)n Simple_repeat Simple_repeat 3 37 0 2 1414 236 153 35 12 chr13 108679765 108679851 -11604461 + (CCG)n Simple_repeat Simple_repeat 1 88 0 2 1414 197 33 0 32 chr13 108680056 108680087 -11604225 + (CCG)n Simple_repeat Simple_repeat 3 32 0 2 1414 23 0 0 0 chr13 108680088 108680111 -11604201 + GC_rich Low_complexity Low_complexity 1 23 0 2 1414 363 127 0 0 chr13 108680126 108680189 -11604123 + (CCG)n Simple_repeat Simple_repeat 2 64 0 2 1414 180 77 0 0 chr13 108681205 108681231 -11603081 + (CCCCG)n Simple_repeat Simple_repeat 3 28 0 2 1414 217 215 121 15 chr13 108682530 108682596 -11601716 - B2_Mm2 SINE B2 -121 74 2 2 1414 22 0 0 0 chr13 108683058 108683080 -11601232 + GC_rich Low_complexity Low_complexity 1 22 0 2 1414 220 318 22 72 chr13 108683370 108683509 -11600803 + L2c LINE L2 3027 3158 -229 2 1414 328 239 102 0 chr13 108684219 108684307 -11600005 + PB1D10 SINE Alu 21 117 0 2 1414 207 0 0 0 chr13 108685295 108685318 -11598994 + (CCCCCT)n Simple_repeat Simple_repeat 2 24 0 2 1414 879 76 127 22 chr13 108686002 108686136 -11598176 + B1_Mus1 SINE Alu 1 148 0 2 1414 252 0 0 0 chr13 108686137 108686165 -11598147 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 2 1414 786 161 244 12 chr13 108686514 108686678 -11597634 + B3 SINE B2 5 206 -10 2 1414 684 182 119 0 chr13 108686736 108686862 -11597450 + B1_Mur1 SINE Alu 2 142 -7 2 1414 641 241 44 0 chr13 108686879 108687016 -11597296 + B1_Mur3 SINE Alu 5 147 -2 2 1414 876 178 21 58 chr13 108687220 108687411 -11596901 + B2_Mm2 SINE B2 2 185 -10 2 1414 917 240 18 76 chr13 108687877 108687899 -11596413 - B3 SINE B2 -3 213 193 2 1414 2870 174 22 48 chr13 108687899 108688489 -11595823 - RMER15 LTR ERVL 0 575 1 2 1414 917 240 18 76 chr13 108688489 108688691 -11595621 - B3 SINE B2 -24 192 2 2 1414 1000 171 39 0 chr13 108688771 108688788 -11595524 - B2_Mm1t SINE B2 -5 188 166 2 1414 243 0 0 0 chr13 108688788 108688815 -11595497 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 2 1414 1245 82 1 0 chr13 108688815 108688978 -11595334 - B2_Mm2 SINE B2 -28 165 1 2 1414 3460 40 10 0 chr13 108689438 108689841 -11594471 - MTB_Mm LTR MaLR 0 407 1 2 1414 192 291 131 28 chr13 108690002 108690147 -11594165 + L2c LINE L2 2993 3152 -235 2 1414 223 200 67 0 chr13 108690813 108690858 -11593454 - L2a LINE L2 -10 3416 3369 2 1414 743 121 0 7 chr13 108690897 108691047 -11593265 + (TC)n Simple_repeat Simple_repeat 1 149 0 2 1414 261 0 0 0 chr13 108691047 108691076 -11593236 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1414 946 136 7 0 chr13 108691076 108691216 -11593096 - B1_Mur4 SINE Alu -9 141 1 2 1414 243 61 0 0 chr13 108691439 108691472 -11592840 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1414 623 273 118 16 chr13 108692006 108692192 -11592120 + B3 SINE B2 12 216 0 2 1414 564 174 0 0 chr13 108692567 108692688 -11591624 + (CA)n Simple_repeat Simple_repeat 2 122 0 2 1414 1355 216 46 44 chr13 108695186 108695553 -11588759 + ORR1D2 LTR MaLR 3 370 0 2 1414 391 289 123 8 chr13 108695754 108695876 -11588436 - ID_B1 SINE B4 -7 217 82 2 1414 325 357 31 37 chr13 108697087 108697250 -11587062 + L1M4 LINE L1 5103 5264 -882 2 1414 427 282 0 5 chr13 108697273 108697386 -11586926 + B1F2 SINE Alu 4 112 -8 2 1414 272 311 20 75 chr13 108697386 108697419 -11586893 + B4A SINE B4 89 226 -66 2 1414 241 174 22 0 chr13 108697432 108697478 -11586834 + L1M4 LINE L1 5321 5367 -1077 2 1414 244 243 203 0 chr13 108697483 108697557 -11586755 + RSINE1 SINE B4 8 96 -69 2 1414 665 235 52 0 chr13 108697559 108697695 -11586617 + B1_Mur3 SINE Alu 1 143 -6 2 1414 249 338 0 0 chr13 108697736 108697807 -11586505 + RSINE1 SINE B4 87 157 -8 2 1414 240 111 0 0 chr13 108697808 108697853 -11586459 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 2 1414 315 359 28 28 chr13 108697900 108698112 -11586200 + L1M4 LINE L1 5350 5561 -883 2 1414 875 133 15 7 chr13 108698117 108698253 -11586059 + B1_Mur4 SINE Alu 1 137 -13 2 1414 313 309 154 17 chr13 108698269 108698509 -11585803 + L1MD LINE L1 5551 5823 -536 2 1414 500 45 0 15 chr13 108698590 108698658 -11585654 + (TTTC)n Simple_repeat Simple_repeat 2 68 0 2 1414 297 128 0 49 chr13 108698658 108698740 -11585572 + T-rich Low_complexity Low_complexity 3 80 0 2 1414 794 152 20 7 chr13 108698753 108698899 -11585413 - B1_Mur4 SINE Alu -1 149 2 2 1414 420 111 0 0 chr13 108699162 108699225 -11585087 + (TA)n Simple_repeat Simple_repeat 2 64 0 2 1414 297 318 0 0 chr13 108699232 108699298 -11585014 - tRNA-Ala-GCA tRNA tRNA -9 66 1 2 1414 833 242 52 21 chr13 108699397 108699591 -11584721 - B3 SINE B2 -16 200 1 2 1414 271 299 16 64 chr13 108699591 108699716 -11584596 + L1ME2z LINE L1 6326 6444 0 2 1414 324 356 43 0 chr13 108701865 108701980 -11582332 - ORR1E LTR MaLR -239 120 1 2 1414 285 75 0 0 chr13 108702400 108702440 -11581872 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1414 243 114 0 0 chr13 108702440 108702484 -11581828 + (CAGA)n Simple_repeat Simple_repeat 2 45 0 2 1414 788 30 0 10 chr13 108703345 108703403 -11580909 + (TTC)n Simple_repeat Simple_repeat 1 58 0 2 1414 1346 56 0 11 chr13 108703403 108703584 -11580728 + (TTCTCC)n Simple_repeat Simple_repeat 2 180 0 2 1414 788 30 0 10 chr13 108703584 108703625 -11580687 + (TTC)n Simple_repeat Simple_repeat 2 42 0 2 1414 259 333 66 15 chr13 108703631 108703768 -11580544 - B1F1 SINE Alu -5 144 1 2 1414 487 320 0 33 chr13 108703818 108703970 -11580342 + B1F SINE Alu 1 147 -2 2 1414 1180 198 71 4 chr13 108704623 108704861 -11579451 + RMER13A LTR ERVK 607 860 0 2 1414 268 178 76 61 chr13 108704922 108704988 -11579324 + B2_Mm2 SINE B2 63 129 -66 2 1414 192 77 0 0 chr13 108704993 108705019 -11579293 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 2 1414 21 95 0 0 chr13 108705020 108705083 -11579229 + AT_rich Low_complexity Low_complexity 1 63 0 2 1414 456 42 14 27 chr13 108705152 108705225 -11579087 + (GA)n Simple_repeat Simple_repeat 1 72 0 2 1414 803 218 40 0 chr13 108705243 108705417 -11578895 - L1MB7 LINE L1 -164 6020 5840 2 1414 661 234 102 32 chr13 108705418 108705634 -11578678 - MER33 DNA MER1_type -93 231 1 2 1414 449 219 160 0 chr13 108705689 108705808 -11578504 - B1F2 SINE Alu 0 149 12 2 1414 271 281 10 129 chr13 108705932 108706034 -11578278 - ID4 SINE ID -60 92 2 2 1414 344 269 0 80 chr13 108706056 108706169 -11578143 - PB1D10 SINE Alu -8 109 6 2 1414 1924 237 57 9 chr13 108706459 108706915 -11577397 + MT2A LTR ERVL 1 478 -55 2 1414 218 77 77 0 chr13 108706918 108706957 -11577355 + GA-rich Low_complexity Low_complexity 3 44 0 2 1414 1197 106 0 0 chr13 108706957 108707137 -11577175 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 1414 270 59 0 0 chr13 108707144 108707178 -11577134 + MT2A LTR ERVL 500 533 0 2 1414 23 33 0 0 chr13 108707292 108707322 -11576990 + AT_rich Low_complexity Low_complexity 1 30 0 2 1414 973 111 7 20 chr13 108708155 108708302 -11576010 - B1_Mus1 SINE Alu 0 148 4 2 1414 573 55 0 0 chr13 108709267 108709340 -11574972 + (CCA)n Simple_repeat Simple_repeat 3 75 0 2 1414 232 236 0 0 chr13 108709343 108709398 -11574914 + (CAGAGA)n Simple_repeat Simple_repeat 3 57 0 2 1414 198 0 0 0 chr13 108710315 108710337 -11573975 + (TAA)n Simple_repeat Simple_repeat 2 23 0 2 1414 1064 198 25 0 chr13 108710457 108710654 -11573658 + B3 SINE B2 1 202 -14 2 1414 1014 54 0 0 chr13 108710660 108710789 -11573523 + (GGAGAA)n Simple_repeat Simple_repeat 3 131 0 2 1414 1157 141 77 10 chr13 108711261 108711469 -11572843 + URR1A DNA MER1_type 5 226 0 2 1414 337 200 114 34 chr13 108711956 108711981 -11572331 - B1_Mur2 SINE Alu 0 149 123 2 1414 360 0 0 0 chr13 108711981 108712021 -11572291 + (TGG)n Simple_repeat Simple_repeat 2 41 0 2 1414 337 232 105 42 chr13 108712021 108712112 -11572200 - B1_Mur2 SINE Alu -27 122 1 2 1414 230 293 78 63 chr13 108713626 108713768 -11570544 + AmnSINE1 SINE SINE 121 264 -311 2 1414 428 352 66 31 chr13 108714280 108714538 -11569774 + L1ME4a LINE L1 5809 6075 -49 2 1414 30 27 0 0 chr13 108714543 108714580 -11569732 + AT_rich Low_complexity Low_complexity 1 37 0 2 1414 484 255 9 19 chr13 108714707 108714815 -11569497 - PB1D10 SINE Alu -1 116 10 2 1414 481 322 16 68 chr13 108715194 108715384 -11568928 - MIRb SINE MIR -38 230 51 2 1414 207 0 0 0 chr13 108715419 108715442 -11568870 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1414 694 340 41 45 chr13 108716491 108716737 -11567575 - B4A SINE B4 -43 249 5 2 1414 219 36 0 0 chr13 108716938 108716966 -11567346 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2 1414 230 323 31 0 chr13 108717255 108717320 -11566992 - ORSL DNA Tip100 0 275 209 2 1414 240 35 0 0 chr13 108717320 108717349 -11566963 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1414 764 52 0 0 chr13 108718337 108718434 -11565878 - B1_Mus2 SINE Alu 0 147 51 3 1414 2364 174 5 59 chr13 108718548 108718989 -11565323 - MTC LTR MaLR -3 418 2 3 1414 290 276 12 12 chr13 108720486 108720584 -11563728 + MIR SINE MIR 46 143 -119 3 1414 246 81 0 0 chr13 108721172 108721209 -11563103 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 1414 398 271 37 18 chr13 108721209 108721309 -11563003 - PB1D10 SINE Alu -11 106 3 3 1414 438 217 12 0 chr13 108721227 108721310 -11563002 - ID_B1 SINE B4 -58 166 83 3 1414 372 22 0 0 chr13 108723524 108723569 -11560743 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1414 463 272 44 0 chr13 108723575 108723689 -11560623 - RSINE1 SINE B4 -45 120 2 3 1414 250 309 15 0 chr13 108724190 108724258 -11560054 + ID SINE ID 4 72 -152 3 1414 396 0 0 0 chr13 108724262 108724306 -11560006 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1414 306 0 0 0 chr13 108724498 108724532 -11559780 + (GA)n Simple_repeat Simple_repeat 2 35 0 3 1414 763 205 52 17 chr13 108725392 108725566 -11558746 + B3A SINE B2 1 180 -18 3 1414 28 48 0 0 chr13 108725582 108725624 -11558688 + AT_rich Low_complexity Low_complexity 1 42 0 3 1414 300 302 141 52 chr13 108727009 108727261 -11557051 + MLT1A1 LTR MaLR 91 406 -2 3 1414 1275 74 0 0 chr13 108727707 108727883 -11556429 + (TCC)n Simple_repeat Simple_repeat 3 178 0 3 1414 492 18 0 0 chr13 108729925 108729982 -11554330 + (TC)n Simple_repeat Simple_repeat 1 57 0 3 1414 753 81 8 16 chr13 108731427 108731552 -11552760 + (GGAA)n Simple_repeat Simple_repeat 2 125 0 3 1414 911 314 34 4 chr13 108731846 108732111 -11552201 - B4A SINE B4 -10 282 10 3 1414 254 394 0 38 chr13 108733047 108733179 -11551133 - MER94 DNA AcHobo -7 127 1 3 1414 820 126 8 0 chr13 108733504 108733631 -11550681 - Lx5 LINE L1 -195 6855 6728 3 1414 386 119 68 19 chr13 108733633 108733736 -11550576 + Lx5 LINE L1 6938 7045 -5 3 1414 581 220 7 0 chr13 108733745 108733895 -11550417 + (TA)n Simple_repeat Simple_repeat 1 151 0 3 1414 216 0 0 0 chr13 108733905 108733929 -11550383 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 3 1414 355 283 26 104 chr13 108734420 108734613 -11549699 - RMER15 LTR ERVL -96 479 302 3 1414 207 0 0 0 chr13 108734823 108734846 -11549466 + (A)n Simple_repeat Simple_repeat 1 23 0 3 1414 265 284 221 87 chr13 108735007 108735397 -11548915 - L2b LINE L2 -14 3361 2920 3 1414 245 260 38 25 chr13 108735568 108735647 -11548665 + ID2 SINE ID 1 80 -3 3 1414 266 164 18 0 chr13 108735647 108735702 -11548610 + GA-rich Low_complexity Low_complexity 2 57 0 3 1414 196 295 40 40 chr13 108735765 108735864 -11548448 - MIR SINE MIR -49 213 115 3 1414 774 188 21 14 chr13 108736637 108736763 -11547549 + B1_Mur3 SINE Alu 1 129 -20 3 1414 899 85 0 8 chr13 108736763 108736894 -11547418 + (TG)n Simple_repeat Simple_repeat 2 131 0 3 1414 774 188 21 14 chr13 108736894 108736907 -11547405 + B1_Mur3 SINE Alu 130 141 -8 3 1414 522 278 102 88 chr13 108736942 108737156 -11547156 + B4A SINE B4 1 198 -94 3 1414 296 83 0 20 chr13 108737156 108737205 -11547107 + (TAA)n Simple_repeat Simple_repeat 2 49 0 3 1414 522 278 102 88 chr13 108737205 108737274 -11547038 + B4A SINE B4 199 288 -4 3 1414 738 235 56 0 chr13 108737370 108737566 -11546746 + B3 SINE B2 2 208 -8 3 1414 384 22 0 0 chr13 108737568 108737613 -11546699 + (CATA)n Simple_repeat Simple_repeat 3 47 0 3 1414 238 359 88 94 chr13 108737736 108737896 -11546416 + ID_B1 SINE B4 3 161 -63 3 1414 367 217 14 0 chr13 108737828 108737897 -11546415 + PB1 SINE Alu 23 92 -35 3 1414 227 311 55 82 chr13 108737886 108738068 -11546244 + LTR83 LTR ERVL 142 318 -462 3 1414 405 0 0 0 chr13 108739386 108739431 -11544881 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1414 349 304 52 65 chr13 108739800 108739955 -11544357 + MIRc SINE MIR 37 194 -74 3 1414 279 323 52 37 chr13 108739966 108740101 -11544211 + MIR SINE MIR 36 172 -90 3 1414 333 68 0 0 chr13 108740776 108740820 -11543492 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1414 479 301 6 44 chr13 108741043 108741203 -11543109 - RSINE1 SINE B4 -8 157 4 3 1414 221 33 33 0 chr13 108741208 108741238 -11543074 + (TC)n Simple_repeat Simple_repeat 1 31 0 3 1414 938 163 11 0 chr13 108741238 108741416 -11542896 + CT-rich Low_complexity Low_complexity 1 180 0 3 1414 270 0 0 0 chr13 108741475 108741505 -11542807 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1414 446 283 36 14 chr13 108741564 108741704 -11542608 - B4A SINE B4 -148 144 2 3 1414 269 312 120 7 chr13 108741731 108741873 -11542439 - Kanga11a DNA Tc2 -810 160 3 3 1414 1160 56 14 0 chr13 108742192 108742336 -11541976 + B1_Mus1 SINE Alu 2 147 -1 3 1414 357 24 0 0 chr13 108742342 108742384 -11541928 + (TAA)n Simple_repeat Simple_repeat 2 43 0 3 1414 423 336 25 19 chr13 108742809 108743007 -11541305 - MIRc SINE MIR -34 234 44 3 1414 610 284 100 32 chr13 108743011 108743262 -11541050 - MamRep434 DNA TcMar -157 269 2 3 1414 189 107 0 0 chr13 108745276 108745304 -11539008 + (T)n Simple_repeat Simple_repeat 1 28 0 3 1414 21 0 0 0 chr13 108745444 108745465 -11538847 + AT_rich Low_complexity Low_complexity 1 21 0 3 1414 249 33 0 0 chr13 108745736 108745766 -11538546 + (CCCCG)n Simple_repeat Simple_repeat 5 34 0 3 1414 254 57 0 70 chr13 108745934 108745991 -11538321 + (CCCCCA)n Simple_repeat Simple_repeat 2 54 0 3 1414 240 200 0 0 chr13 108746334 108746384 -11537928 + GA-rich Low_complexity Low_complexity 3 52 0 3 1414 302 256 0 71 chr13 108746517 108746601 -11537711 - MLT1C LTR MaLR -1 466 389 3 1414 549 268 109 50 chr13 108746635 108746937 -11537375 - MLT1C LTR MaLR -139 328 9 3 1414 209 0 97 0 chr13 108747221 108747252 -11537060 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1414 292 214 0 97 chr13 108747481 108747543 -11536769 - ID4_ SINE ID -5 78 23 3 1414 189 0 0 0 chr13 108747647 108747668 -11536644 + (T)n Simple_repeat Simple_repeat 1 21 0 3 1414 1172 55 0 7 chr13 108747668 108747815 -11536497 - B1_Mus2 SINE Alu 0 147 2 3 1414 264 122 0 0 chr13 108748740 108748781 -11535531 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1414 269 278 144 0 chr13 108748799 108748889 -11535423 - RSINE1 SINE B4 -55 110 8 3 1414 710 267 58 36 chr13 108749481 108749706 -11534606 + Tigger7 DNA MER2_type 241 470 -2021 3 1414 267 260 143 20 chr13 108749706 108749804 -11534508 + Tigger7 DNA MER2_type 2327 2436 -55 3 1414 228 35 0 0 chr13 108749931 108749960 -11534352 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1414 860 207 59 77 chr13 108751218 108751438 -11532874 + B3 SINE B2 1 216 0 3 1414 23 0 0 0 chr13 108751580 108751603 -11532709 + AT_rich Low_complexity Low_complexity 1 23 0 3 1414 753 100 15 8 chr13 108751630 108751761 -11532551 + (CCCCCT)n Simple_repeat Simple_repeat 2 133 0 3 1414 555 256 0 16 chr13 108751789 108751912 -11532400 - RSINE1 SINE B4 -37 128 8 3 1414 190 211 69 17 chr13 108752958 108753016 -11531296 - L4 LINE RTE -280 1749 1689 3 1414 417 204 96 10 chr13 108753129 108753233 -11531079 - ID_B1 SINE B4 -34 190 78 3 1414 225 65 0 0 chr13 108753289 108753320 -11530992 + (TG)n Simple_repeat Simple_repeat 1 31 0 3 1414 232 274 95 21 chr13 108753546 108753651 -11530661 + MIRm SINE MIR 69 179 -89 3 1414 206 259 37 0 chr13 108754208 108754262 -11530050 + MIRb SINE MIR 114 169 -99 3 1414 1641 21 16 10 chr13 108755388 108755580 -11528732 - B2_Mm1a SINE B2 0 193 1 3 1414 228 111 0 0 chr13 108756086 108756122 -11528190 + (TTG)n Simple_repeat Simple_repeat 1 36 0 3 1414 828 270 101 47 chr13 108756151 108756427 -11527885 - B4A SINE B4 0 292 2 3 1414 190 176 0 39 chr13 108756577 108756654 -11527658 + (TTTG)n Simple_repeat Simple_repeat 2 75 0 3 1414 183 152 0 0 chr13 108756950 108756996 -11527316 + T-rich Low_complexity Low_complexity 1 46 0 3 1414 210 105 0 0 chr13 108757013 108757051 -11527261 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 3 1414 662 189 35 14 chr13 108757057 108757202 -11527110 - B1_Mur2 SINE Alu -1 148 1 3 1414 226 337 0 30 chr13 108757310 108757411 -11526901 - L1MEd LINE L1 -5565 554 457 3 1414 317 345 55 55 chr13 108757672 108757853 -11526459 - L1MEd LINE L1 -5937 182 2 3 1414 2070 119 21 52 chr13 108758038 108758367 -11525945 - ORR1A2 LTR MaLR -8 319 1 3 1414 252 59 0 0 chr13 108758800 108758834 -11525478 + (CAG)n Simple_repeat Simple_repeat 2 35 0 3 1414 267 31 0 0 chr13 108759212 108759244 -11525068 + (CAGA)n Simple_repeat Simple_repeat 3 34 0 3 1414 224 238 0 0 chr13 108759387 108759429 -11524883 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 3 1414 450 0 0 0 chr13 108760668 108760718 -11523594 + (TC)n Simple_repeat Simple_repeat 1 50 0 3 1414 235 263 178 20 chr13 108761078 108761179 -11523133 + MIRc SINE MIR 22 138 -130 3 1414 385 304 70 35 chr13 108761369 108761570 -11522742 - MLT1F LTR MaLR -22 526 319 3 1414 258 32 0 0 chr13 108762068 108762099 -11522213 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 3 1414 414 0 0 0 chr13 108762476 108762522 -11521790 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1414 534 212 143 75 chr13 108762928 108763144 -11521168 - B3 SINE B2 -8 208 5 3 1414 950 285 63 141 chr13 108763727 108763878 -11520434 - MTD LTR MaLR 0 419 287 3 1414 1273 48 0 0 chr13 108763878 108764025 -11520287 + B1_Mm SINE Alu 1 147 0 3 1414 950 285 63 141 chr13 108764025 108764314 -11519998 - MTD LTR MaLR -133 286 13 3 1414 24 0 0 0 chr13 108765808 108765832 -11518480 + AT_rich Low_complexity Low_complexity 1 24 0 3 1414 357 82 0 0 chr13 108766046 108766095 -11518217 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1414 308 303 140 32 chr13 108766528 108766685 -11517627 - L1MEc LINE L1 -6198 202 29 3 1414 252 310 34 22 chr13 108766693 108766782 -11517530 + MER5A DNA MER1_type 10 99 -90 3 1414 1031 219 49 0 chr13 108768012 108768217 -11516095 + B3 SINE B2 1 215 -1 3 1414 709 336 33 4 chr13 108768253 108768498 -11515814 - MLT1H1 LTR MaLR -8 547 296 4 1414 435 286 7 60 chr13 108769224 108769373 -11514939 - RSINE1 SINE B4 0 165 25 4 1414 740 270 80 92 chr13 108769401 108769727 -11514585 - MLT1A LTR MaLR 0 374 53 4 1414 252 261 30 71 chr13 108771624 108771723 -11512589 - L2c LINE L2 -37 3350 3256 4 1414 1041 119 16 0 chr13 108771817 108772071 -11512241 + (CA)n Simple_repeat Simple_repeat 1 258 0 4 1414 230 267 26 13 chr13 108772248 108772324 -11511988 - L1M5 LINE L1 -1538 4608 4532 4 1414 1466 78 5 5 chr13 108772641 108772833 -11511479 - B2_Mm2 SINE B2 -3 192 1 4 1414 342 342 90 21 chr13 108772955 108773143 -11511169 - L1M5 LINE L1 -800 5346 5146 4 1414 759 313 10 53 chr13 108773196 108773496 -11510816 - B4 SINE B4 -4 288 2 4 1414 974 222 14 33 chr13 108773520 108773734 -11510578 - B3 SINE B2 -1 215 6 4 1414 1981 150 150 17 chr13 108773977 108774365 -11509947 - RMER1B Other Other -5 1337 628 4 1414 596 325 92 59 chr13 108774381 108774467 -11509845 - L2 LINE L2 -1220 2199 2101 4 1414 326 23 23 0 chr13 108774467 108774510 -11509802 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 4 1414 596 325 92 59 chr13 108774510 108774966 -11509346 - L2 LINE L2 -1319 2100 1639 4 1414 319 339 39 46 chr13 108775130 108775260 -11509052 - Charlie2b DNA MER1_type 0 2782 2654 4 1414 873 139 16 0 chr13 108775388 108775517 -11508795 + B1_Mur4 SINE Alu 3 133 -17 4 1414 285 29 0 0 chr13 108775825 108775859 -11508453 + (CA)n Simple_repeat Simple_repeat 2 35 0 4 1414 667 227 14 34 chr13 108775866 108776012 -11508300 + RSINE1 SINE B4 4 146 -19 4 1414 30 0 0 0 chr13 108776024 108776054 -11508258 + AT_rich Low_complexity Low_complexity 1 30 0 4 1414 383 203 13 13 chr13 108776232 108776307 -11508005 + RSINE1 SINE B4 4 78 -87 4 1414 1855 190 50 15 chr13 108776460 108776860 -11507452 - MTD LTR MaLR -3 416 3 4 1414 686 275 52 14 chr13 108776880 108777090 -11507222 - L1MB3 LINE L1 -139 6044 5827 4 1414 402 324 0 0 chr13 108777099 108777201 -11507111 + B3A SINE B2 5 106 -92 4 1414 407 219 0 0 chr13 108777257 108777330 -11506982 + B1_Mus1 SINE Alu 3 75 -73 4 1414 346 298 0 78 chr13 108777316 108777418 -11506894 + B3A SINE B2 105 198 0 4 1414 814 241 8 77 chr13 108777435 108777669 -11506643 - L1MB3 LINE L1 -365 5818 5601 4 1414 725 174 0 0 chr13 108777734 108777855 -11506457 + B1_Mus1 SINE Alu 3 123 -25 4 1414 229 324 86 7 chr13 108778004 108778147 -11506165 - MIRb SINE MIR -98 178 22 4 1414 192 77 0 0 chr13 108778457 108778483 -11505829 + (CAA)n Simple_repeat Simple_repeat 2 27 0 4 1414 1371 323 68 9 chr13 108779408 108779977 -11504335 + MLT1E1A LTR MaLR 10 612 -68 4 1414 605 164 9 0 chr13 108780003 108780112 -11504200 + B1_Mur4 SINE Alu 33 142 -8 4 1414 180 0 0 0 chr13 108780112 108780132 -11504180 + (CAA)n Simple_repeat Simple_repeat 2 21 0 4 1414 297 240 57 19 chr13 108780515 108780621 -11503691 + MLT1I LTR MaLR 298 407 -4 4 1414 383 227 7 0 chr13 108780731 108780885 -11503427 + G-rich Low_complexity Low_complexity 1 155 0 4 1414 389 204 80 0 chr13 108780899 108780987 -11503325 + B1_Mur2 SINE Alu 42 136 -13 4 1414 198 0 0 0 chr13 108780989 108781011 -11503301 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 4 1414 409 231 53 34 chr13 108783123 108783280 -11501032 + MTEb LTR MaLR 205 372 -7 4 1414 219 36 0 0 chr13 108786026 108786054 -11498258 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 4 1414 230 349 0 0 chr13 108786061 108786127 -11498185 + ID4_ SINE ID 5 70 -13 4 1414 207 0 0 0 chr13 108786127 108786150 -11498162 + (CAA)n Simple_repeat Simple_repeat 2 24 0 4 1414 383 286 147 33 chr13 108786409 108786859 -11497453 + MLT1E LTR MaLR 145 652 -1 4 1414 2939 11 2 103 chr13 108787888 108788296 -11496016 - IAPLTR1_Mm LTR ERVK 0 367 1 4 176 29703 16 1 0 chr13 108788296 108791565 -11492747 - IAPEz-int LTR ERVK 0 6481 3210 4 1415 1902 83 0 0 chr13 108791564 108791805 -11492507 - IAPEz-int LTR ERVK -5168 1313 1073 4 1415 4330 91 98 52 chr13 108791831 108792718 -11491594 - IAPEz-int LTR ERVK -5621 860 67 4 1415 1041 86 159 0 chr13 108792689 108792852 -11491460 - IAPEz-int LTR ERVK -6285 196 8 4 1415 2925 14 2 103 chr13 108792852 108793260 -11491052 - IAPLTR1_Mm LTR ERVK 0 367 1 4 1415 2040 92 49 0 chr13 108793260 108793565 -11490747 + ORR1A2 LTR MaLR 8 327 0 4 1415 1782 152 50 6 chr13 108793852 108794189 -11490123 - ORR1B2 LTR MaLR -15 352 1 4 1415 393 22 0 0 chr13 108796939 108796985 -11487327 + (CAAG)n Simple_repeat Simple_repeat 2 47 0 4 1415 595 196 194 38 chr13 108797003 108797189 -11487123 - B3 SINE B2 0 216 2 4 1415 1340 240 102 20 chr13 108797280 108797671 -11486641 + Lx7 LINE L1 6855 7277 -419 4 1415 423 98 0 0 chr13 108797731 108797792 -11486520 + (GA)n Simple_repeat Simple_repeat 1 61 0 4 1415 492 68 0 0 chr13 108798025 108798098 -11486214 + (T)n Simple_repeat Simple_repeat 1 73 0 4 1415 426 252 48 0 chr13 108798110 108798213 -11486099 - PB1D10 SINE Alu -8 109 2 4 1415 524 354 0 6 chr13 108798533 108798695 -11485617 + RSINE1 SINE B4 1 161 -4 4 1415 845 235 24 5 chr13 108798866 108799071 -11485241 + B3 SINE B2 1 209 -7 4 1415 506 279 117 70 chr13 108799431 108799843 -11484469 + L1MC5 LINE L1 6635 7065 -896 4 1415 1133 118 159 5 chr13 108799974 108800169 -11484143 + URR1B DNA MER1_type 1 225 0 4 1415 263 222 161 36 chr13 108800200 108800312 -11484000 + L1MC5 LINE L1 7268 7393 -568 4 1415 1378 221 85 6 chr13 108800573 108800915 -11483397 + ORR1D2 LTR MaLR 2 370 0 4 1415 234 180 0 0 chr13 108801060 108801121 -11483191 + (ATG)n Simple_repeat Simple_repeat 3 63 0 4 1415 190 333 14 0 chr13 108801143 108801215 -11483097 - MIRb SINE MIR -23 245 173 4 1415 260 202 11 141 chr13 108801261 108801353 -11482959 + ID4 SINE ID 2 81 -2 4 1415 1056 142 21 21 chr13 108801575 108801762 -11482550 - B2_Mm2 SINE B2 -7 188 2 4 1415 693 280 59 53 chr13 108802685 108803040 -11481272 - ORR1E LTR MaLR 0 359 3 4 1415 28 48 0 0 chr13 108803267 108803309 -11481003 + AT_rich Low_complexity Low_complexity 1 42 0 4 1415 489 147 0 0 chr13 108804370 108804465 -11479847 + (TG)n Simple_repeat Simple_repeat 1 95 0 4 1415 516 184 132 0 chr13 108804758 108804872 -11479440 + B1_Mur1 SINE Alu 1 129 -20 4 1415 198 0 0 0 chr13 108804885 108804907 -11479405 + (CTA)n Simple_repeat Simple_repeat 1 22 0 4 1415 321 299 86 40 chr13 108805317 108805491 -11478821 - HAL1 LINE L1 -82 2425 2244 4 1415 388 307 119 49 chr13 108805821 108806006 -11478306 - B4 SINE B4 -7 285 88 4 1415 381 181 0 0 chr13 108806007 108806101 -11478211 + (TG)n Simple_repeat Simple_repeat 2 95 0 4 1415 231 191 0 0 chr13 108806105 108806147 -11478165 - B4 SINE B4 -212 80 39 4 1415 378 287 15 44 chr13 108806205 108806340 -11477972 - HAL1 LINE L1 -1207 1300 1170 4 1415 186 71 0 0 chr13 108806349 108806377 -11477935 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 1415 612 40 0 0 chr13 108806538 108806613 -11477699 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 4 1415 330 26 0 0 chr13 108806638 108806677 -11477635 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1415 292 269 250 11 chr13 108807108 108807292 -11477020 - HAL1 LINE L1 -2134 373 146 4 1415 188 244 0 0 chr13 108807366 108807407 -11476905 - L2c LINE L2 -8 3379 3339 4 1415 279 271 16 25 chr13 108808699 108808820 -11475492 + L1MC LINE L1 3612 3731 -2415 4 1415 2813 132 114 34 chr13 108808842 108809377 -11474935 - MT2B2 LTR ERVL -6 578 1 4 1415 335 256 136 21 chr13 108809405 108809545 -11474767 + L1M5 LINE L1 3778 3933 -2213 4 1415 596 262 57 0 chr13 108810146 108810287 -11474025 - B1F2 SINE Alu 0 149 1 4 1415 215 284 136 10 chr13 108810545 108810648 -11473664 + B4A SINE B4 8 123 -169 4 1415 887 265 56 60 chr13 108811099 108811384 -11472928 - B4A SINE B4 -8 284 1 4 1415 265 75 38 0 chr13 108811483 108811536 -11472776 + (TTAA)n Simple_repeat Simple_repeat 4 58 0 4 1415 547 206 19 0 chr13 108811580 108811687 -11472625 + PB1D10 SINE Alu 1 109 -8 4 1415 295 198 60 51 chr13 108811757 108811874 -11472438 + L1M5 LINE L1 5738 5855 -385 4 1415 847 242 67 0 chr13 108813340 108813534 -11470778 - B3 SINE B2 -5 211 5 4 1415 414 0 0 0 chr13 108813774 108813820 -11470492 + (TTATA)n Simple_repeat Simple_repeat 5 50 0 4 1415 234 62 0 0 chr13 108813828 108813860 -11470452 + (CATA)n Simple_repeat Simple_repeat 4 35 0 4 1415 486 0 0 0 chr13 108814044 108814098 -11470214 + (GA)n Simple_repeat Simple_repeat 2 55 0 4 1415 423 276 16 0 chr13 108814899 108815022 -11469290 - MER5B DNA MER1_type -3 175 51 4 1415 315 0 0 0 chr13 108815610 108815645 -11468667 + (T)n Simple_repeat Simple_repeat 1 35 0 4 1415 219 69 0 0 chr13 108815690 108815719 -11468593 + (T)n Simple_repeat Simple_repeat 1 29 0 4 1415 392 298 0 39 chr13 108816065 108816194 -11468118 + Lx9 LINE L1 7292 7415 -229 4 1415 286 276 101 55 chr13 108816239 108816477 -11467835 + Lx9 LINE L1 7395 7643 -1 4 1415 257 291 54 18 chr13 108816678 108816790 -11467522 + PB1D10 SINE Alu 1 116 -1 4 1415 1331 62 0 6 chr13 108816796 108816935 -11467377 + (GGAGAA)n Simple_repeat Simple_repeat 3 141 0 4 1415 1374 56 0 0 chr13 108816935 108817115 -11467197 + (GAA)n Simple_repeat Simple_repeat 1 180 0 4 1415 1331 62 0 6 chr13 108817115 108817154 -11467158 + (GGAGAA)n Simple_repeat Simple_repeat 4 42 0 4 1415 643 304 165 24 chr13 108817892 108818232 -11466080 - MLT1F2 LTR MaLR -2 558 171 4 1415 611 250 6 37 chr13 108818281 108818443 -11465869 + L1MC4 LINE L1 6771 6927 -1115 4 1415 1489 152 34 97 chr13 108819221 108819490 -11464822 - ORR1A4 LTR MaLR 0 329 66 4 1415 3548 15 5 0 chr13 108819490 108819884 -11464428 + MTA_Mm LTR MaLR 1 396 0 4 1415 9593 20 0 20 chr13 108819884 108821005 -11463307 + MTA_Mm-int LTR MaLR 1 1098 0 4 1415 3560 13 5 0 chr13 108821005 108821399 -11462913 + MTA_Mm LTR MaLR 1 396 0 4 1415 1489 152 34 97 chr13 108821399 108821478 -11462834 - ORR1A4 LTR MaLR -264 65 3 4 1415 1207 216 99 9 chr13 108821478 108821801 -11462511 - ORR1D1 LTR MaLR -22 352 1 4 1415 216 0 0 0 chr13 108822110 108822134 -11462178 + (TG)n Simple_repeat Simple_repeat 1 24 0 4 1415 202 29 28 28 chr13 108822576 108822612 -11461700 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1415 336 262 156 0 chr13 108822635 108822757 -11461555 + L1MC4 LINE L1 6421 6561 -1481 4 1415 1477 62 0 25 chr13 108822760 108822960 -11461352 - B2_Mm2 SINE B2 0 195 1 4 1415 784 214 21 0 chr13 108823013 108823158 -11461154 - B1_Mur1 SINE Alu 0 149 2 4 1415 21 0 0 0 chr13 108823170 108823191 -11461121 + AT_rich Low_complexity Low_complexity 1 21 0 4 1415 544 310 23 0 chr13 108823257 108823431 -11460881 + L1MC4 LINE L1 6734 6911 -1131 4 1415 2774 42 33 3 chr13 108823432 108823768 -11460544 + ORR1A1 LTR MaLR 1 346 0 5 1415 3040 62 23 0 chr13 108823768 108824367 -11459945 + ORR1A1-int LTR MaLR 3 426 -1366 5 1415 466 264 116 10 chr13 108824369 108824576 -11459736 + L1MC4 LINE L1 6910 7138 -904 4 1415 230 226 19 0 chr13 108824849 108824902 -11459410 + B4 SINE B4 44 97 -195 5 1415 243 28 83 0 chr13 108824902 108824938 -11459374 - L1_Mm LINE L1 -1397 4486 4448 5 1415 3181 49 0 3 chr13 108824933 108825321 -11458991 - L1Md_F2 LINE L1 -481 6101 5715 5 1415 4097 36 0 0 chr13 108825321 108825792 -11458520 + L1Md_F2 LINE L1 6100 6570 -12 5 1415 236 261 77 0 chr13 108825796 108825861 -11458451 + B4 SINE B4 89 158 -134 5 1415 394 305 141 21 chr13 108826302 108826543 -11457769 - HERV16-int LTR ERVL -2550 2446 2177 5 1415 227 220 152 0 chr13 108827512 108827571 -11456741 - MIR SINE MIR -182 80 13 5 1415 345 47 0 0 chr13 108828257 108828300 -11456012 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1415 227 255 0 0 chr13 108829328 108829375 -11454937 - L4 LINE RTE -193 1836 1790 5 1415 549 239 112 18 chr13 108830640 108830919 -11453393 + ORR1C2 LTR MaLR 5 382 -2 5 1415 243 0 0 0 chr13 108831308 108831335 -11452977 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1415 368 231 112 28 chr13 108832651 108832758 -11451554 - ID_B1 SINE B4 -4 220 105 5 1415 290 320 19 0 chr13 108832861 108832964 -11451348 + PB1D10 SINE Alu 9 113 -4 5 1415 183 42 0 0 chr13 108834513 108834537 -11449775 + (CCTCG)n Simple_repeat Simple_repeat 4 27 0 5 1415 189 0 0 0 chr13 108834606 108834627 -11449685 + (CCCCG)n Simple_repeat Simple_repeat 2 22 0 5 1415 213 273 0 52 chr13 108835501 108835559 -11448753 + ID4 SINE ID 18 72 -11 5 1415 234 0 0 0 chr13 108835828 108835854 -11448458 + (T)n Simple_repeat Simple_repeat 1 26 0 5 1415 3976 111 96 30 chr13 108835870 108836578 -11447734 - RMER6A LTR ERVK 0 756 2 5 1415 219 69 0 0 chr13 108836984 108837013 -11447299 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1415 195 42 0 0 chr13 108839997 108840021 -11444291 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1415 410 19 37 0 chr13 108840788 108840842 -11443470 + (CATA)n Simple_repeat Simple_repeat 3 58 0 5 1415 21 0 0 0 chr13 108841198 108841219 -11443093 + AT_rich Low_complexity Low_complexity 1 21 0 5 1415 2709 138 67 4 chr13 108841269 108841729 -11442583 - Lx4A LINE L1 -4 7054 6566 5 1415 269 200 0 0 chr13 108841775 108841825 -11442487 + B1_Mm SINE Alu 45 94 -53 5 1415 4083 60 17 8 chr13 108841844 108842369 -11441943 - L1_Mus1 LINE L1 0 6567 6038 5 1415 439 224 54 40 chr13 108844223 108844372 -11439940 + ID_B1 SINE B4 74 224 0 5 1415 264 100 0 0 chr13 108844852 108844892 -11439420 + (A)n Simple_repeat Simple_repeat 1 40 0 5 1415 265 333 148 16 chr13 108844931 108845187 -11439125 + L1MEf LINE L1 165 454 -5946 5 1415 330 281 11 0 chr13 108845475 108845564 -11438748 - MER3 DNA MER1_type -111 98 9 5 1415 374 279 206 14 chr13 108846067 108846431 -11437881 + L1MEf LINE L1 1365 1798 -4617 5 1415 3593 13 2 0 chr13 108846431 108846826 -11437486 + MTA_Mm LTR MaLR 1 396 0 5 1415 608 259 73 117 chr13 108847131 108847489 -11436823 - ORR1E LTR MaLR -6 353 12 5 1415 23 0 0 0 chr13 108848969 108848992 -11435320 + AT_rich Low_complexity Low_complexity 1 23 0 5 1415 228 167 0 0 chr13 108849313 108849361 -11434951 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 5 1415 430 250 62 28 chr13 108852222 108852399 -11431913 - MER53 DNA hAT -1 192 10 5 1415 187 328 15 76 chr13 108852972 108853104 -11431208 + L2 LINE L2 2310 2433 -986 5 1415 215 170 21 0 chr13 108854414 108854461 -11429851 + A-rich Low_complexity Low_complexity 2 49 0 5 1415 245 244 32 95 chr13 108854775 108854870 -11429442 + L2a LINE L2 3287 3426 0 5 1415 501 223 29 51 chr13 108856124 108856261 -11428051 + RSINE1 SINE B4 2 135 -30 5 1415 306 0 0 0 chr13 108856304 108856338 -11427974 + (CA)n Simple_repeat Simple_repeat 2 35 0 5 1415 249 299 82 0 chr13 108856406 108856503 -11427809 - L2a LINE L2 -33 3393 3289 5 1415 230 424 0 0 chr13 108857066 108857238 -11427074 + (TG)n Simple_repeat Simple_repeat 1 172 0 5 1415 218 431 0 0 chr13 108857250 108857424 -11426888 + (TG)n Simple_repeat Simple_repeat 1 174 0 5 1415 423 0 0 0 chr13 108859081 108859128 -11425184 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 5 1415 1772 207 8 3 chr13 108860046 108860399 -11423913 + Lx9 LINE L1 6738 7092 -552 5 1415 259 348 79 0 chr13 108860908 108860997 -11423315 - LTR16E2 LTR ERVL -227 341 246 5 1415 475 250 32 8 chr13 108861332 108861457 -11422855 + RSINE1 SINE B4 3 130 -35 5 1415 349 217 43 21 chr13 108861501 108861595 -11422717 - MLT2D LTR ERVL -216 198 103 5 1415 258 105 0 0 chr13 108861738 108861776 -11422536 + (TATG)n Simple_repeat Simple_repeat 1 38 0 5 1415 363 44 0 0 chr13 108861860 108861905 -11422407 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 5 1415 1131 282 135 25 chr13 108861940 108862450 -11421862 - L1MA5A LINE L1 -409 5888 5323 5 1415 1602 104 216 2 chr13 108863231 108863616 -11420696 + RMER6A LTR ERVK 3 470 -286 5 1415 296 254 58 17 chr13 108865279 108865399 -11418913 + Lx7 LINE L1 7572 7696 0 5 1415 429 253 165 0 chr13 108865489 108865647 -11418665 - ID_B1 SINE B4 -39 185 2 5 1415 861 129 53 21 chr13 108865964 108866154 -11418158 - Charlie2a DNA MER1_type -1200 1661 1466 5 1415 319 127 16 16 chr13 108866520 108866584 -11417728 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 5 1415 242 242 96 118 chr13 108866624 108866760 -11417552 + MER58A DNA MER1_type 47 179 -45 5 1415 340 288 9 35 chr13 108866795 108866910 -11417402 + PB1D7 SINE Alu 7 118 -2 5 1415 395 306 73 27 chr13 108867648 108867907 -11416405 - L1MC4 LINE L1 -502 7540 7270 5 1415 235 303 194 40 chr13 108868650 108868811 -11415501 + MamRep605 Unknown Unknown 26 226 -650 5 1415 1218 35 0 20 chr13 108868811 108868959 -11415353 + B1_Mm SINE Alu 2 146 -1 5 1415 235 303 194 40 chr13 108868959 108869075 -11415237 + MamRep605 Unknown Unknown 227 346 -530 5 1415 1905 105 147 0 chr13 108870446 108870731 -11413581 - ORR1A2 LTR MaLR 0 327 1 5 1415 303 211 14 27 chr13 108870918 108870991 -11413321 + Lx8 LINE L1 6770 6841 -632 5 1415 687 307 22 42 chr13 108870984 108871297 -11413015 + Lx8 LINE L1 7167 7473 0 5 1415 477 269 8 8 chr13 108871664 108871784 -11412528 - RSINE1 SINE B4 -21 144 25 5 1415 823 168 28 0 chr13 108872569 108872712 -11411600 - B1_Mur1 SINE Alu 0 149 3 5 1415 186 43 0 0 chr13 108872795 108872818 -11411494 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 5 1415 251 314 83 17 chr13 108873145 108873265 -11411047 - MIRc SINE MIR -85 183 56 5 1415 680 173 0 3 chr13 108873944 108874066 -11410246 + B3 SINE B2 1 119 -76 5 1415 570 236 124 21 chr13 108874236 108874422 -11409890 + Cheshire DNA MER1_type 66 270 -2150 5 1415 308 215 0 15 chr13 108874817 108874883 -11409429 - ID4_ SINE ID -18 65 1 5 1415 246 208 82 36 chr13 108874935 108875045 -11409267 + MER58B DNA MER1_type 80 194 -147 5 1415 23 0 0 0 chr13 108876051 108876074 -11408238 + AT_rich Low_complexity Low_complexity 1 23 0 5 1415 274 321 56 9 chr13 108876171 108876278 -11408034 + MLT1E2 LTR MaLR 301 412 -215 5 1415 534 253 54 43 chr13 108876513 108876699 -11407613 - L1M5 LINE L1 -452 5712 5525 5 1415 243 276 44 33 chr13 108876812 108876902 -11407410 - L1M5 LINE L1 -1428 4718 4628 5 1415 410 321 45 6 chr13 108877064 108877221 -11407091 - RSINE1 SINE B4 0 165 3 5 1415 579 301 29 0 chr13 108877229 108877402 -11406910 - B4A SINE B4 -113 179 2 5 1415 315 246 0 14 chr13 108877486 108877556 -11406756 - ID4 SINE ID -14 69 1 5 1415 244 210 32 16 chr13 108877610 108877673 -11406639 - PB1D7 SINE Alu -56 64 1 5 1415 222 244 24 49 chr13 108877810 108877892 -11406420 + ID4 SINE ID 2 81 -2 5 1415 182 300 169 14 chr13 108877894 108877965 -11406347 + MIR SINE MIR 20 101 -161 5 1415 620 337 167 14 chr13 108878467 108879210 -11405102 + L2 LINE L2 2197 3053 -366 5 1415 219 36 0 0 chr13 108879257 108879285 -11405027 + (GA)n Simple_repeat Simple_repeat 2 29 0 5 1415 446 277 140 49 chr13 108880529 108880772 -11403540 - B4A SINE B4 -26 266 2 5 1415 257 266 0 15 chr13 108880823 108880888 -11403424 - L2b LINE L2 -1 3374 3311 5 1415 249 241 0 0 chr13 108881419 108881473 -11402839 + G-rich Low_complexity Low_complexity 6 59 0 5 1415 234 0 0 0 chr13 108881502 108881528 -11402784 + (TTAGGG)n Simple_repeat Simple_repeat 3 28 0 5 1415 22 35 0 0 chr13 108881910 108881939 -11402373 + AT_rich Low_complexity Low_complexity 1 29 0 5 1415 296 322 35 0 chr13 108882660 108882790 -11401522 - B4A SINE B4 -145 147 14 5 1415 344 288 99 50 chr13 108883252 108883453 -11400859 - B4A SINE B4 -81 211 1 5 1415 2942 73 127 4 chr13 108883612 108884068 -11400244 - MURVY-LTR LTR ERV1 -7 512 1 5 1415 237 276 0 41 chr13 108885298 108885419 -11398893 - Lx9 LINE L1 -128 7516 7401 5 1415 499 196 0 56 chr13 108885428 108885536 -11398776 - ID_B1 SINE B4 0 224 123 5 1415 3075 141 58 4 chr13 108885622 108886119 -11398193 - RMER1B Other Other -91 975 452 5 1415 405 0 0 0 chr13 108886327 108886372 -11397940 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1415 548 65 13 0 chr13 108886372 108886449 -11397863 + (GA)n Simple_repeat Simple_repeat 1 78 0 5 1415 634 296 100 76 chr13 108886848 108887409 -11396903 - L1_Mur3 LINE L1 -675 5622 4977 5 1415 620 253 26 46 chr13 108888180 108888375 -11395937 + Lx9 LINE L1 6959 7149 -495 5 1415 363 80 0 0 chr13 108888383 108888433 -11395879 - ORR1D1 LTR MaLR 0 370 321 5 1415 459 179 29 26 chr13 108888411 108888531 -11395781 - ORR1D1 LTR MaLR -239 135 16 5 1415 343 265 57 29 chr13 108888610 108888715 -11395597 + Lx9 LINE L1 7359 7466 -178 5 1415 327 278 82 0 chr13 108888783 108888880 -11395432 - Lx8 LINE L1 -317 7156 7052 5 1415 241 324 0 0 chr13 108889078 108889149 -11395163 - L1MC LINE L1 -2133 5749 5679 5 1415 249 269 43 18 chr13 108889143 108889272 -11395040 + L1M5 LINE L1 5233 5368 -756 5 1415 354 308 95 25 chr13 108889278 108889478 -11394834 + L1M5 LINE L1 5540 5753 -2129 5 1415 1141 88 0 7 chr13 108889551 108889699 -11394613 + B1_Mus1 SINE Alu 2 148 0 5 1415 216 97 0 0 chr13 108889701 108889732 -11394580 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 5 1415 1271 36 0 0 chr13 108890077 108890216 -11394096 - B1_Mus2 SINE Alu -8 139 1 6 1415 1643 216 78 17 chr13 108890582 108890940 -11393372 - MTD LTR MaLR -18 401 22 6 1415 1308 207 31 68 chr13 108891787 108892109 -11392203 - Lx5 LINE L1 -5 7045 6736 6 1415 21 71 0 0 chr13 108892896 108892938 -11391374 + AT_rich Low_complexity Low_complexity 1 42 0 6 1415 219 309 44 0 chr13 108892951 108893019 -11391293 + ID4 SINE ID 4 74 -9 6 1415 755 94 8 0 chr13 108893028 108893155 -11391157 + (CA)n Simple_repeat Simple_repeat 2 129 0 6 1415 410 240 0 71 chr13 108893741 108893771 -11390541 - B1_Mur4 SINE Alu -35 115 90 6 1415 198 0 0 0 chr13 108893771 108893793 -11390519 + (CA)n Simple_repeat Simple_repeat 2 23 0 6 1415 460 206 0 3 chr13 108893793 108893874 -11390438 - PB1D9 SINE Alu -61 89 11 6 1415 1805 211 246 32 chr13 108893874 108894581 -11389731 + Lx9 LINE L1 6756 7613 -31 6 1415 1106 226 83 64 chr13 108894946 108895653 -11388659 + Lx7 LINE L1 6831 7692 -4 6 1415 24 0 0 0 chr13 108895960 108895984 -11388328 + AT_rich Low_complexity Low_complexity 1 24 0 6 1415 208 53 26 26 chr13 108896168 108896207 -11388105 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 6 1415 466 249 65 6 chr13 108897044 108897214 -11387098 - MamRep1161 DNA TcMar -772 185 6 6 1415 1185 95 0 0 chr13 108897794 108897941 -11386371 - B1_Mm SINE Alu 0 147 1 6 1415 353 260 197 39 chr13 108898579 108898787 -11385525 - L1M3 LINE L1 -906 5234 4994 6 1415 235 248 86 60 chr13 108900106 108900222 -11384090 - L1MC1 LINE L1 -14 6319 6201 6 1415 462 269 148 23 chr13 108900323 108900540 -11383772 - L1MC1 LINE L1 -301 6032 5789 6 1415 789 62 0 0 chr13 108900711 108900823 -11383489 + (CA)n Simple_repeat Simple_repeat 1 112 0 6 1415 2322 181 95 16 chr13 108902314 108902831 -11381481 + Lx9 LINE L1 7060 7617 -27 6 1415 290 273 41 90 chr13 108903382 108903527 -11380785 - MLT1C LTR MaLR -172 295 158 6 1415 842 169 88 7 chr13 108904072 108904209 -11380103 - B1_Mur2 SINE Alu 0 149 2 6 1415 22 0 0 0 chr13 108905387 108905409 -11378903 + AT_rich Low_complexity Low_complexity 1 22 0 6 1415 249 260 164 39 chr13 108905524 108905628 -11378684 - ID_B1 SINE B4 -63 161 45 6 1415 1521 81 9 14 chr13 108906838 108907051 -11377261 + RLTR33 LTR ERVK 1 212 -466 6 1415 1424 250 107 27 chr13 108907051 108907536 -11376776 + RLTR11A2 LTR ERVK 1 524 -3 6 1415 2196 139 171 0 chr13 108907536 108907939 -11376373 + RLTR33 LTR ERVK 207 678 0 6 1415 359 326 44 33 chr13 108907989 108908170 -11376142 + HAL1-2a_MD LINE L1 2325 2507 -517 6 1415 190 100 122 24 chr13 108908225 108908266 -11376046 - L3 LINE CR1 -100 4389 4345 6 1415 2740 251 129 11 chr13 108908664 108909534 -11374778 - RCHARR1 DNA MER1_type 0 974 3 6 1415 437 195 75 38 chr13 108910144 108910277 -11374035 - L1MC1 LINE L1 -1 6332 6195 6 1415 383 305 88 34 chr13 108910532 108910835 -11373477 + L1M5 LINE L1 5494 5808 -2074 6 1415 553 292 67 38 chr13 108910836 108911149 -11373163 + Lx8 LINE L1 7151 7472 -1 6 1415 583 234 75 107 chr13 108911888 108912075 -11372237 + B3 SINE B2 8 188 -7 6 1415 292 257 13 39 chr13 108914283 108914360 -11369952 - L2b LINE L2 -2 3373 3299 6 1415 24 0 0 0 chr13 108914702 108914726 -11369586 + AT_rich Low_complexity Low_complexity 1 24 0 6 1415 208 291 190 44 chr13 108914819 108914977 -11369335 + MIR SINE MIR 5 185 -77 6 1415 315 122 0 0 chr13 108915265 108915314 -11368998 + (TG)n Simple_repeat Simple_repeat 2 50 0 6 1415 461 327 115 69 chr13 108915941 108916289 -11368023 + MER47A DNA MER2_type 3 366 0 6 1415 333 0 0 0 chr13 108916368 108916405 -11367907 + (TAG)n Simple_repeat Simple_repeat 2 38 0 6 1415 671 274 107 30 chr13 108916515 108916778 -11367534 + B4A SINE B4 7 289 -3 6 1415 259 259 80 31 chr13 108916799 108916962 -11367350 + (CATATA)n Simple_repeat Simple_repeat 3 173 0 6 1415 344 284 83 42 chr13 108917101 108917318 -11366994 + L1MC LINE L1 2990 3215 -2931 6 1415 23 0 0 0 chr13 108917426 108917449 -11366863 + AT_rich Low_complexity Low_complexity 1 23 0 6 1415 523 231 132 0 chr13 108917463 108917584 -11366728 - B3 SINE B2 -1 215 79 6 1415 591 107 0 104 chr13 108917589 108917724 -11366588 + L1Md_F3 LINE L1 6464 6584 0 6 1415 219 69 0 0 chr13 108917737 108917766 -11366546 + (A)n Simple_repeat Simple_repeat 1 29 0 6 1415 423 0 0 0 chr13 108920400 108920447 -11363865 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 6 1415 1310 41 0 0 chr13 108920449 108920596 -11363716 - B1_Mus2 SINE Alu 0 147 1 6 1416 366 353 26 0 chr13 108921045 108921201 -11363111 - L2 LINE L2 -966 2453 2294 6 1416 570 283 74 20 chr13 108921809 108921957 -11362355 + RSINE1 SINE B4 4 159 -6 6 1416 3392 48 8 0 chr13 108923626 108924021 -11360291 + L1_Mus1 LINE L1 6170 6567 0 6 1416 456 216 29 29 chr13 108924236 108924341 -11359971 + B1F SINE Alu 44 148 -1 6 1416 874 223 17 0 chr13 108924750 108924925 -11359387 - B3 SINE B2 -38 178 1 6 1416 573 248 0 0 chr13 108925247 108925356 -11358956 + PB1D10 SINE Alu 1 109 -8 6 1416 528 323 49 26 chr13 108925870 108926096 -11358216 + L2 LINE L2 2814 3044 -375 6 1416 3657 35 0 0 chr13 108926426 108926822 -11357490 - MTA_Mm LTR MaLR 0 396 1 6 1416 21 0 0 0 chr13 108928535 108928556 -11355756 + AT_rich Low_complexity Low_complexity 1 21 0 6 1416 198 103 0 0 chr13 108928663 108928692 -11355620 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 6 1416 202 261 0 0 chr13 108929258 108929304 -11355008 + (GAATG)n Simple_repeat Simple_repeat 3 48 0 6 1416 617 237 43 43 chr13 108931013 108931154 -11353158 - RSINE1 SINE B4 -20 145 5 6 1416 471 304 29 14 chr13 108931755 108931895 -11352417 - B3 SINE B2 0 216 75 6 1416 335 298 121 45 chr13 108932113 108932517 -11351795 - L1MB5 LINE L1 0 6174 5740 6 1416 352 318 38 8 chr13 108932802 108932935 -11351377 - B1F SINE Alu -12 137 1 6 1416 341 219 49 12 chr13 108933184 108933346 -11350966 + (TA)n Simple_repeat Simple_repeat 1 168 0 6 1416 459 125 0 0 chr13 108933369 108933441 -11350871 + (TG)n Simple_repeat Simple_repeat 1 72 0 6 1416 436 291 119 25 chr13 108933540 108933776 -11350536 - L1MB5 LINE L1 -835 5311 5054 6 1416 575 282 51 0 chr13 108934674 108934830 -11349482 - RSINE1 SINE B4 0 165 2 6 1416 551 283 23 1 chr13 108935662 108935802 -11348510 + B1F SINE Alu 1 150 0 6 1416 251 304 64 69 chr13 108935961 108936134 -11348178 + Lx8 LINE L1 7052 7223 -250 6 1416 643 303 23 23 chr13 108936157 108936373 -11347939 + RMER15 LTR ERVL 347 562 -13 6 1416 364 296 96 0 chr13 108936568 108936703 -11347609 + L2 LINE L2 2333 2480 -939 6 1416 336 188 0 0 chr13 108936869 108936938 -11347374 + (CATA)n Simple_repeat Simple_repeat 1 69 0 6 1416 394 293 99 14 chr13 108936938 108937080 -11347232 + RSINE1 SINE B4 12 165 0 6 1416 1172 132 78 0 chr13 108937140 108937359 -11346953 + ORR1D2-int LTR MaLR 1135 1370 0 6 1416 1313 239 90 24 chr13 108937359 108937694 -11346618 + ORR1D2 LTR MaLR 1 357 -13 6 1416 1073 256 21 11 chr13 108937695 108937975 -11346337 + ORR1D2 LTR MaLR 86 368 -2 6 1416 636 132 387 19 chr13 108938041 108938196 -11346116 + B3 SINE B2 1 212 -4 6 1416 554 234 207 56 chr13 108938232 108938589 -11345723 + L1MA8 LINE L1 5850 6260 -31 6 1416 23 54 0 0 chr13 108938594 108938631 -11345681 + AT_rich Low_complexity Low_complexity 1 37 0 6 1416 199 324 123 9 chr13 108938771 108938877 -11345435 + L2 LINE L2 2730 2847 -572 6 1416 483 63 0 0 chr13 108939778 108939841 -11344471 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 6 1416 1067 213 15 10 chr13 108939953 108940157 -11344155 + B3 SINE B2 6 210 -6 6 1416 1478 46 0 28 chr13 108940179 108940339 -11343973 + B2_Mm1t SINE B2 1 160 -33 6 1416 186 43 0 0 chr13 108940339 108940362 -11343950 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 6 1416 1478 46 0 28 chr13 108940362 108940380 -11343932 + B2_Mm1t SINE B2 161 174 -19 6 1416 783 287 15 65 chr13 108940411 108940735 -11343577 + Lx7 LINE L1 5602 5909 -1787 6 1416 294 206 0 0 chr13 108941170 108941233 -11343079 + (TTATA)n Simple_repeat Simple_repeat 5 67 0 6 1416 360 244 146 32 chr13 108941252 108941472 -11342840 + Lx9 LINE L1 7373 7617 -27 6 1416 24 53 0 0 chr13 108941502 108941540 -11342772 + AT_rich Low_complexity Low_complexity 1 38 0 6 1416 243 206 97 11 chr13 108941571 108941664 -11342648 + L1MA8 LINE L1 6170 6270 -21 6 1416 320 278 17 61 chr13 108944300 108944415 -11339897 + B3A SINE B2 73 182 -16 6 1416 333 243 61 26 chr13 108944573 108944687 -11339625 + L1MC1 LINE L1 5845 5962 -371 6 1416 326 296 9 36 chr13 108944874 108944986 -11339326 + RSINE1 SINE B4 57 165 0 6 1416 1066 304 7 37 chr13 108945160 108945460 -11338852 + B4A SINE B4 2 292 0 6 1416 528 186 38 106 chr13 108945525 108945657 -11338655 + B1_Mur1 SINE Alu 27 149 0 6 1416 789 294 72 0 chr13 108945992 108946271 -11338041 + L1MD2 LINE L1 5654 5952 -407 6 1416 578 295 73 23 chr13 108946485 108946745 -11337567 - B4A SINE B4 -18 274 2 6 1416 747 177 27 47 chr13 108946946 108947094 -11337218 - B1_Mur3 SINE Alu 0 149 5 6 1416 347 284 144 62 chr13 108947103 108947471 -11336841 + L1ME1 LINE L1 5586 5983 -196 6 1416 723 189 41 33 chr13 108947552 108947746 -11336566 + B3 SINE B2 1 193 0 6 1416 696 136 27 0 chr13 108948106 108948216 -11336096 - B1_Mus2 SINE Alu -12 135 23 6 1416 859 253 169 14 chr13 108949323 108949736 -11334576 - Tigger6a DNA MER2_type -574 509 29 6 1416 408 276 76 17 chr13 108949971 108950089 -11334223 + B1F2 SINE Alu 2 126 -23 6 1416 1000 166 135 0 chr13 108950448 108950641 -11333671 + URR1A DNA MER1_type 1 219 -7 6 1416 275 274 169 8 chr13 108951271 108951389 -11332923 + MIRc SINE MIR 27 163 -105 6 1416 301 296 12 0 chr13 108951642 108951723 -11332589 + ID4 SINE ID 2 83 0 7 1416 680 321 134 3 chr13 108951804 108952132 -11332180 + BLACKJACK DNA AcHobo 67 437 -2507 7 1416 934 297 115 47 chr13 108952175 108952451 -11331861 + BLACKJACK DNA AcHobo 569 851 -2093 7 1416 1110 65 58 0 chr13 108952451 108952590 -11331722 + B1_Mus2 SINE Alu 1 147 0 7 1416 934 297 115 47 chr13 108952590 108953136 -11331176 + BLACKJACK DNA AcHobo 852 1447 -1497 7 1416 266 221 0 105 chr13 108953181 108953257 -11331055 + ID_B1 SINE B4 91 158 -66 7 1416 399 295 194 24 chr13 108955223 108955511 -11328801 + BLACKJACK DNA AcHobo 2246 2582 -362 7 1416 738 183 15 15 chr13 108957148 108957281 -11327031 + B1_Mus1 SINE Alu 3 135 -13 7 1416 378 0 0 0 chr13 108957312 108957354 -11326958 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1416 243 0 0 0 chr13 108957354 108957380 -11326932 + (CG)n Simple_repeat Simple_repeat 2 28 0 7 1416 743 229 24 6 chr13 108957766 108957933 -11326379 - Lx8 LINE L1 -963 6510 6341 7 1416 481 133 80 0 chr13 108958047 108958122 -11326190 - B1_Mur3 SINE Alu -68 81 1 7 1416 27 49 0 0 chr13 108958169 108958210 -11326102 + AT_rich Low_complexity Low_complexity 1 41 0 7 1416 33 0 0 0 chr13 108958384 108958417 -11325895 + AT_rich Low_complexity Low_complexity 1 33 0 7 1416 24 0 0 0 chr13 108958567 108958591 -11325721 + AT_rich Low_complexity Low_complexity 1 24 0 7 1416 186 103 0 0 chr13 108959280 108959309 -11325003 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1416 208 331 99 12 chr13 108959842 108960013 -11324299 + MIRb SINE MIR 83 268 0 7 1416 288 53 0 0 chr13 108960293 108960331 -11323981 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1416 593 183 99 8 chr13 108960640 108960761 -11323551 + B1F SINE Alu 5 136 -13 7 1416 925 161 207 6 chr13 108961247 108961416 -11322896 + B3 SINE B2 5 207 -9 7 1416 241 368 82 26 chr13 108961637 108961832 -11322480 - L2 LINE L2 -1746 1673 1468 7 1416 1327 82 29 0 chr13 108962080 108962251 -11322061 + B2_Mm2 SINE B2 1 176 -19 7 1416 220 206 0 45 chr13 108962824 108962890 -11321422 + T-rich Low_complexity Low_complexity 3 65 0 7 1416 503 231 41 8 chr13 108963272 108963394 -11320918 + RSINE1 SINE B4 6 131 -34 7 1416 351 0 0 0 chr13 108963400 108963439 -11320873 + (CA)n Simple_repeat Simple_repeat 1 39 0 7 1416 28 61 0 0 chr13 108964127 108964176 -11320136 + AT_rich Low_complexity Low_complexity 1 49 0 7 1416 1086 188 33 9 chr13 108964823 108965033 -11319279 - B3 SINE B2 0 216 2 7 1416 1441 81 5 0 chr13 108965156 108965341 -11318971 - B2_Mm1t SINE B2 -7 186 1 7 1416 243 354 101 0 chr13 108966112 108966211 -11318101 - B4A SINE B4 -152 140 32 7 1416 22 0 0 0 chr13 108966676 108966698 -11317614 + GC_rich Low_complexity Low_complexity 1 22 0 7 1416 334 219 0 40 chr13 108969309 108969385 -11314927 - ID2 SINE ID -10 73 1 7 1416 283 268 137 43 chr13 108969512 108969629 -11314683 - L2a LINE L2 -5 3421 3294 7 1416 334 238 0 24 chr13 108969710 108969792 -11314520 + B1F SINE Alu 65 144 -5 7 1416 342 250 65 6 chr13 108971212 108971381 -11312931 - ORR1A2-int LTR MaLR -1070 893 715 7 1416 755 206 42 71 chr13 108971277 108971481 -11312831 - MT2B LTR ERVL -315 286 52 7 1416 3516 124 43 8 chr13 108971435 108972020 -11312292 - ORR1A2-int LTR MaLR -1187 605 1 7 1416 2102 99 50 0 chr13 108972026 108972328 -11311984 - ORR1A2 LTR MaLR -10 317 1 7 1416 283 310 80 0 chr13 108972762 108972875 -11311437 - MIRb SINE MIR -84 184 63 7 1416 1054 17 16 70 chr13 108973389 108973575 -11310737 + (GGAAA)n Simple_repeat Simple_repeat 4 179 0 7 1416 291 214 0 0 chr13 108973576 108973646 -11310666 + GA-rich Low_complexity Low_complexity 4 73 0 7 1416 658 245 59 13 chr13 108974508 108974661 -11309651 - RSINE1 SINE B4 -4 161 2 7 1416 990 273 41 35 chr13 108974683 108975025 -11309287 - MTEa LTR MaLR -3 376 33 7 1416 582 315 127 31 chr13 108975120 108975379 -11308933 - B4A SINE B4 -8 284 1 7 1416 1069 228 5 20 chr13 108975852 108976053 -11308259 + B3 SINE B2 2 199 -17 7 1416 333 0 0 0 chr13 108976075 108976112 -11308200 + (TG)n Simple_repeat Simple_repeat 2 38 0 7 1416 440 273 0 0 chr13 108976179 108976267 -11308045 + B1F SINE Alu 54 141 -8 7 1416 653 134 9 0 chr13 108976270 108976382 -11307930 + (GA)n Simple_repeat Simple_repeat 2 114 0 7 1416 558 264 23 0 chr13 108976494 108976623 -11307689 - ID_B1 SINE B4 -7 217 86 7 1416 970 140 0 14 chr13 108977775 108977920 -11306392 - B1_Mus2 SINE Alu 0 147 5 7 1416 232 170 0 0 chr13 108979041 108979088 -11305224 + T-rich Low_complexity Low_complexity 1 47 0 7 1416 234 0 0 0 chr13 108979574 108979600 -11304712 + (TC)n Simple_repeat Simple_repeat 2 27 0 7 1416 554 146 9 0 chr13 108979600 108979710 -11304602 + (TA)n Simple_repeat Simple_repeat 1 111 0 7 1416 1627 62 5 0 chr13 108979868 108980061 -11304251 - B2_Mm2 SINE B2 -1 194 1 7 1416 225 297 49 10 chr13 108980118 108980220 -11304092 + PB1D10 SINE Alu 7 112 -5 7 1416 708 269 82 0 chr13 108980283 108980465 -11303847 + B3 SINE B2 9 205 -11 7 1416 848 171 64 0 chr13 108980532 108980672 -11303640 + B1_Mur3 SINE Alu 1 149 0 7 1416 268 278 0 0 chr13 108981358 108981412 -11302900 + B1F SINE Alu 1 54 -95 7 1416 239 125 20 20 chr13 108983000 108983049 -11301263 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 7 1416 366 82 99 12 chr13 108983063 108983224 -11301088 + (TA)n Simple_repeat Simple_repeat 2 176 0 7 1416 569 211 19 0 chr13 108983671 108983775 -11300537 + B3 SINE B2 3 108 -108 7 1416 214 263 131 148 chr13 108984382 108984402 -11299910 - B4 SINE B4 -40 252 173 7 1416 528 200 43 78 chr13 108984402 108984543 -11299769 - B1_Mur1 SINE Alu -2 147 12 7 1416 214 263 131 148 chr13 108984543 108984565 -11299747 - B4 SINE B4 -40 172 73 7 1416 189 0 0 0 chr13 108985240 108985261 -11299051 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 1416 494 242 36 73 chr13 108985261 108985464 -11298848 - MTE2a LTR MaLR -5 416 182 7 1416 2934 273 223 11 chr13 108985991 108986806 -11297506 - MTE-int LTR MaLR -54 1526 525 7 1416 261 0 0 0 chr13 108986806 108986835 -11297477 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1416 2934 273 223 11 chr13 108986835 108987277 -11297035 - MTE-int LTR MaLR -1056 524 2 7 1416 472 236 217 30 chr13 108987317 108987483 -11296829 - B3A SINE B2 -1 197 1 7 1416 354 196 27 89 chr13 108987875 108987911 -11296401 - B1F SINE Alu -36 113 82 7 1416 1839 199 74 0 chr13 108987911 108988263 -11296049 - ORR1C1 LTR MaLR 0 378 1 7 1416 354 196 27 89 chr13 108988263 108988338 -11295974 - B1F SINE Alu -68 81 9 7 1416 293 252 88 66 chr13 108988338 108988353 -11295959 - B4A SINE B4 -123 169 82 7 1416 180 0 0 0 chr13 108988353 108988373 -11295939 + (T)n Simple_repeat Simple_repeat 1 20 0 7 1416 563 289 133 6 chr13 108988464 108988645 -11295667 - ID_B1 SINE B4 -6 218 15 7 1416 1088 103 0 12 chr13 108989468 108989635 -11294677 - B2_Mm2 SINE B2 -8 187 23 7 1416 869 216 64 16 chr13 108989674 108989862 -11294450 + B3A SINE B2 1 197 -1 7 1416 200 150 50 0 chr13 108990381 108990421 -11293891 + CT-rich Low_complexity Low_complexity 2 43 0 7 1416 419 344 12 12 chr13 108990446 108990611 -11293701 + (CATG)n Simple_repeat Simple_repeat 1 165 0 7 1416 350 305 226 13 chr13 108990623 108990862 -11293450 - B4A SINE B4 -2 290 1 7 1416 334 320 31 16 chr13 108991132 108991259 -11293053 + L2a LINE L2 3294 3422 -4 7 1416 1498 164 136 3 chr13 108991579 108991896 -11292416 + ORR1B2 LTR MaLR 1 359 -8 7 1416 212 86 0 28 chr13 108992173 108992209 -11292103 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 7 1416 425 330 44 57 chr13 108992304 108992600 -11291712 + B4A SINE B4 1 292 0 7 1416 303 204 0 0 chr13 108992754 108992808 -11291504 + B3A SINE B2 2 55 -143 7 1416 336 304 12 42 chr13 108992851 108992999 -11291313 - MLT1J1 LTR MaLR -290 158 13 7 1416 1621 259 66 37 chr13 108993110 108993683 -11290629 - Lx8 LINE L1 -57 7416 6827 7 1416 261 0 0 0 chr13 108993920 108993949 -11290363 + (CAAT)n Simple_repeat Simple_repeat 1 29 0 7 1416 233 299 0 38 chr13 108993949 108994029 -11290283 + CT-rich Low_complexity Low_complexity 5 81 0 7 1416 352 196 10 98 chr13 108994223 108994325 -11289987 - HAL1-3A_ME LINE L1 -788 2070 1978 7 1416 302 274 0 116 chr13 108994336 108994431 -11289881 - RSINE1 SINE B4 0 165 82 7 1416 614 278 85 10 chr13 108994435 108994635 -11289677 - ID_B1 SINE B4 -8 216 2 7 1416 981 272 116 3 chr13 108995131 108995441 -11288871 + MLT1A0 LTR MaLR 4 348 -17 7 1416 1937 83 13 68 chr13 108996748 108997057 -11287255 + ORR1A4 LTR MaLR 38 329 0 7 1416 547 281 9 0 chr13 108997325 108997439 -11286873 - PB1D7 SINE Alu -3 117 3 7 1416 454 297 71 21 chr13 108997697 108997838 -11286474 + RSINE1 SINE B4 2 149 -16 7 1416 492 32 0 0 chr13 108997891 108997953 -11286359 + (CA)n Simple_repeat Simple_repeat 1 62 0 7 1416 1004 255 10 0 chr13 108998141 108998345 -11285967 + B3 SINE B2 2 207 -9 7 1416 429 266 50 58 chr13 108998375 108998495 -11285817 + PB1D9 SINE Alu 2 120 0 7 1416 306 364 51 6 chr13 108998660 108998837 -11285475 + MIR SINE MIR 19 203 -59 7 1416 201 39 0 0 chr13 108999167 108999193 -11285119 + (TG)n Simple_repeat Simple_repeat 2 27 0 7 1416 366 273 63 25 chr13 108999231 108999389 -11284923 - RSINE1 SINE B4 0 165 2 7 1416 290 238 91 70 chr13 108999472 108999589 -11284723 + L1M3 LINE L1 5365 5486 -678 7 1416 250 255 77 58 chr13 109000144 109000248 -11284064 + MLT1A LTR MaLR 249 354 -20 1 1416 263 186 466 0 chr13 109000366 109000454 -11283858 + RSINE1 SINE B4 2 130 -35 2 1416 414 0 0 0 chr13 109000476 109000522 -11283790 + (CA)n Simple_repeat Simple_repeat 2 47 0 3 1416 302 152 0 17 chr13 109000772 109000832 -11283480 + CT-rich Low_complexity Low_complexity 2 60 0 4 1416 1014 91 0 0 chr13 109000833 109000976 -11283336 + (TTCC)n Simple_repeat Simple_repeat 3 145 0 5 1416 336 321 14 14 chr13 109001096 109001235 -11283077 + L2 LINE L2 1910 2048 -1371 6 1416 403 327 98 45 chr13 109001690 109002087 -11282225 + L2 LINE L2 2177 2594 -825 6 1416 235 209 221 0 chr13 109002161 109002173 -11282139 - ID_B1 SINE B4 -11 213 109 7 1416 362 149 122 0 chr13 109002173 109002247 -11282065 - B1_Mus2 SINE Alu -37 110 28 8 1416 265 233 27 14 chr13 109002398 109002415 -11281897 + B4A SINE B4 71 88 -204 9 1416 440 237 17 17 chr13 109002415 109002531 -11281781 + PB1D10 SINE Alu 2 117 0 1 1416 360 219 0 0 chr13 109002535 109002617 -11281695 + A-rich Low_complexity Low_complexity 1 82 0 1 1416 332 283 74 16 chr13 109002821 109002943 -11281369 + B1F SINE Alu 21 149 0 1 1416 225 0 0 0 chr13 109003182 109003207 -11281105 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 1 1416 298 295 0 25 chr13 109003399 109003479 -11280833 - ID4_ SINE ID -1 82 5 1 1416 1056 220 0 14 chr13 109006430 109006651 -11277661 - ID_B1 SINE B4 -4 220 3 1 1416 678 239 7 7 chr13 109007583 109007722 -11276590 + ID_B1 SINE B4 81 219 -5 1 1416 336 275 116 30 chr13 109007911 109008110 -11276202 + L1M3 LINE L1 5482 5697 -486 1 1416 255 266 25 0 chr13 109008251 109008330 -11275982 - B4A SINE B4 -207 85 5 1 1416 414 0 0 0 chr13 109008778 109008824 -11275488 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1416 374 276 0 0 chr13 109008854 109008988 -11275324 + (TG)n Simple_repeat Simple_repeat 1 134 0 1 1416 576 135 0 0 chr13 109008989 109009100 -11275212 + (TC)n Simple_repeat Simple_repeat 1 111 0 2 1416 226 182 109 0 chr13 109009100 109009155 -11275157 - B4A SINE B4 -6 286 226 2 1416 23 0 0 0 chr13 109010596 109010619 -11273693 + AT_rich Low_complexity Low_complexity 1 23 0 2 1416 300 325 132 0 chr13 109011316 109011513 -11272799 + Tigger13a DNA MER2_type 218 440 -331 2 1416 335 136 44 33 chr13 109011546 109011637 -11272675 + A-rich Low_complexity Low_complexity 4 95 0 2 1416 258 105 0 0 chr13 109011909 109011947 -11272365 + (CAT)n Simple_repeat Simple_repeat 3 40 0 2 1416 1067 55 0 33 chr13 109012554 109012704 -11271608 - B2_Mm2 SINE B2 -20 175 31 2 1416 214 318 22 11 chr13 109012828 109012917 -11271395 + L2a LINE L2 2759 2848 -571 2 1416 345 286 0 0 chr13 109012944 109013042 -11271270 + L1MB3 LINE L1 6052 6149 -34 2 1416 203 261 86 14 chr13 109013483 109013553 -11270759 + L2a LINE L2 3352 3426 0 2 1416 486 0 0 0 chr13 109013728 109013782 -11270530 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1416 479 289 18 0 chr13 109013786 109013900 -11270412 + B4A SINE B4 161 276 -16 3 1416 468 0 0 0 chr13 109013910 109013962 -11270350 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1416 2176 167 82 5 chr13 109014385 109014776 -11269536 - MTC LTR MaLR 0 421 1 3 1416 463 226 109 36 chr13 109015181 109015319 -11268993 - B1F SINE Alu 0 149 2 3 1416 204 67 0 0 chr13 109015428 109015458 -11268854 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 3 1416 226 231 43 32 chr13 109015570 109015664 -11268648 - L1MC5 LINE L1 -240 7721 7627 3 1416 207 298 82 12 chr13 109017287 109017372 -11266940 + MER5B DNA MER1_type 59 149 -29 3 1416 21 36 0 0 chr13 109017542 109017570 -11266742 + AT_rich Low_complexity Low_complexity 1 28 0 3 1416 346 245 33 15 chr13 109017580 109017696 -11266616 + PB1D10 SINE Alu 1 122 -5 3 1416 315 0 0 0 chr13 109018185 109018220 -11266092 + (CCAA)n Simple_repeat Simple_repeat 1 35 0 3 1416 364 333 75 24 chr13 109019560 109019772 -11264540 - Charlie10 DNA MER1_type -2563 259 37 4 1416 495 0 0 0 chr13 109020144 109020199 -11264113 + (TTTTC)n Simple_repeat Simple_repeat 3 57 0 4 1416 189 259 56 56 chr13 109020300 109020390 -11263922 - L2 LINE L2 -671 2748 2659 4 1416 350 274 114 23 chr13 109020723 109020854 -11263458 - MLT1E2 LTR MaLR -33 594 452 4 1416 273 250 44 0 chr13 109020934 109021002 -11263310 - RSINE1 SINE B4 -30 135 65 4 1416 455 266 102 40 chr13 109021244 109021420 -11262892 - MLT1E2 LTR MaLR -440 187 1 4 1416 180 0 0 0 chr13 109021521 109021541 -11262771 + (TC)n Simple_repeat Simple_repeat 1 20 0 4 1416 270 219 0 0 chr13 109021543 109021607 -11262705 + (CATA)n Simple_repeat Simple_repeat 4 67 0 4 1416 315 0 0 0 chr13 109021609 109021644 -11262668 + (GA)n Simple_repeat Simple_repeat 2 36 0 4 1416 258 81 0 0 chr13 109021728 109021765 -11262547 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 4 1416 957 269 14 0 chr13 109021813 109022025 -11262287 + ID_B1 SINE B4 7 221 -3 4 1416 469 287 17 0 chr13 109022176 109022291 -11262021 - ID_B1 SINE B4 -8 216 100 5 1416 285 361 60 0 chr13 109022291 109022309 -11262003 - B1F2 SINE Alu -8 141 1 5 1416 198 0 0 0 chr13 109023053 109023075 -11261237 + (TG)n Simple_repeat Simple_repeat 2 23 0 5 1416 311 254 66 33 chr13 109023076 109023198 -11261114 - L1M LINE L1 -739 5385 5260 5 1416 626 113 0 9 chr13 109024232 109024348 -11259964 + (GAAA)n Simple_repeat Simple_repeat 2 116 0 5 1416 396 0 0 0 chr13 109025244 109025288 -11259024 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1416 199 50 0 70 chr13 109025627 109025670 -11258642 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 5 1416 1223 41 7 0 chr13 109025672 109025818 -11258494 - B1_Mus2 SINE Alu 0 147 1 5 1416 306 0 0 0 chr13 109026256 109026290 -11258022 + (TA)n Simple_repeat Simple_repeat 1 34 0 5 1416 611 142 27 0 chr13 109026321 109026469 -11257843 + (TA)n Simple_repeat Simple_repeat 1 152 0 5 1416 320 300 31 136 chr13 109026517 109026679 -11257633 - RSINE1 SINE B4 -15 150 6 5 1416 622 290 21 16 chr13 109026715 109026904 -11257408 + B3 SINE B2 6 195 -21 6 1416 294 29 0 0 chr13 109026911 109026946 -11257366 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 6 1416 406 237 61 0 chr13 109027578 109027692 -11256620 - B3 SINE B2 0 216 96 6 1416 210 205 0 0 chr13 109027983 109028022 -11256290 - ID4_ SINE ID -26 57 19 6 1416 288 70 0 0 chr13 109028033 109028076 -11256236 + (TC)n Simple_repeat Simple_repeat 2 44 0 6 1416 275 150 64 7 chr13 109028075 109028216 -11256096 + (TA)n Simple_repeat Simple_repeat 2 150 0 6 1416 1184 68 0 0 chr13 109028258 109028404 -11255908 - B1_Mus2 SINE Alu 0 147 2 6 1416 277 311 29 19 chr13 109028405 109028510 -11255802 - PB1D10 SINE Alu -11 106 1 6 1416 295 288 0 0 chr13 109028542 109028615 -11255697 + B3A SINE B2 5 77 -121 6 1416 274 262 55 18 chr13 109028700 109028809 -11255503 - L1MB8 LINE L1 -16 6162 6050 6 1416 458 264 94 34 chr13 109028873 109029022 -11255290 - RSINE1 SINE B4 -5 160 3 7 1416 959 265 204 26 chr13 109029040 109029505 -11254807 - L1MB8 LINE L1 -159 6019 5472 6 1416 242 355 97 16 chr13 109029700 109029886 -11254426 + MIRb SINE MIR 52 252 -16 7 1416 180 0 0 0 chr13 109030237 109030257 -11254055 + (ATTG)n Simple_repeat Simple_repeat 1 20 0 7 1416 935 118 263 6 chr13 109030687 109030858 -11253454 - B3 SINE B2 0 216 2 7 1416 180 0 0 0 chr13 109031011 109031031 -11253281 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 7 1416 573 55 0 0 chr13 109033222 109033295 -11251017 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 1416 462 114 0 0 chr13 109033295 109033364 -11250948 + (TA)n Simple_repeat Simple_repeat 2 71 0 7 1416 411 21 0 0 chr13 109033946 109033994 -11250318 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1416 240 35 0 0 chr13 109034051 109034080 -11250232 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 7 1416 978 251 113 16 chr13 109034084 109034331 -11249981 - B4A SINE B4 -10 282 12 7 1416 207 0 0 0 chr13 109035152 109035175 -11249137 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 8 1416 626 230 100 16 chr13 109035175 109035365 -11248947 - B3 SINE B2 -9 207 2 8 1416 581 264 35 18 chr13 109036043 109036254 -11248058 - L1M5 LINE L1 -357 5822 5604 8 1416 361 214 6 17 chr13 109036377 109036467 -11247845 - L1M5 LINE L1 -1583 4563 4474 8 1416 3116 81 35 0 chr13 109036860 109037293 -11247019 - L1_Mus3 LINE L1 -6 6632 6185 8 1416 222 116 0 0 chr13 109037395 109037438 -11246874 + (TC)n Simple_repeat Simple_repeat 2 44 0 8 1416 234 0 0 0 chr13 109037441 109037467 -11246845 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 1416 529 268 43 0 chr13 109038498 109038636 -11245676 - MLT1C LTR MaLR 0 467 324 8 1416 274 285 64 16 chr13 109038673 109038799 -11245513 - MLT1C LTR MaLR -136 254 124 8 1416 223 269 19 0 chr13 109038806 109038858 -11245454 + CT-rich Low_complexity Low_complexity 2 54 0 8 1416 329 290 0 41 chr13 109038858 109038955 -11245357 - RSINE1 SINE B4 -69 96 4 8 1416 332 282 16 31 chr13 109038955 109039071 -11245241 - MLT1C LTR MaLR -266 124 11 8 1416 242 281 90 0 chr13 109039675 109039764 -11244548 + L2a LINE L2 3322 3418 -8 8 1416 180 0 0 0 chr13 109040092 109040112 -11244200 + (CAA)n Simple_repeat Simple_repeat 2 21 0 9 1416 216 0 0 0 chr13 109041405 109041429 -11242883 + (T)n Simple_repeat Simple_repeat 1 24 0 9 1416 267 167 0 0 chr13 109041624 109041690 -11242622 + (TG)n Simple_repeat Simple_repeat 1 66 0 9 1416 271 359 37 37 chr13 109041690 109041797 -11242515 - PB1D10 SINE Alu -10 107 1 9 1416 251 256 73 49 chr13 109041906 109041988 -11242324 + PB1D10 SINE Alu 19 102 -15 9 1416 304 200 31 0 chr13 109043198 109043263 -11241049 - MTEa LTR MaLR -1 378 312 9 1416 941 273 153 9 chr13 109043442 109043894 -11240418 - L1M3 LINE L1 -2854 2993 2474 9 1416 264 187 87 11 chr13 109044016 109044108 -11240204 - L1M3 LINE L1 -3706 2440 2342 9 1416 499 220 0 0 chr13 109044260 109044351 -11239961 + B3 SINE B2 3 93 -123 9 1416 579 295 40 10 chr13 109044506 109044708 -11239604 + MER20 DNA MER1_type 12 219 0 9 1416 250 313 12 12 chr13 109045711 109045795 -11238517 - MER104 DNA Tc2 -84 97 14 9 1416 508 281 57 24 chr13 109046118 109046326 -11237986 + B3A SINE B2 1 157 -41 1 1416 288 264 34 94 chr13 109046319 109046436 -11237876 + B3A SINE B2 88 197 -1 9 1416 630 39 0 0 chr13 109047116 109047193 -11237119 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1416 206 237 0 33 chr13 109047395 109047456 -11236856 + (CACCC)n Simple_repeat Simple_repeat 3 61 0 1 1416 307 277 58 19 chr13 109047842 109047945 -11236367 - MIR3 SINE MIR -15 193 87 1 1416 448 322 32 32 chr13 109048553 109048710 -11235602 - RSINE1 SINE B4 -8 157 1 1 1416 219 139 0 0 chr13 109049422 109049458 -11234854 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1416 2805 149 4 2 chr13 109049901 109050358 -11233954 + Lx4A LINE L1 6601 7058 0 1 1416 208 211 0 0 chr13 109050361 109050399 -11233913 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 1 1416 312 234 16 0 chr13 109051390 109051483 -11232829 - L1MA4 LINE L1 -15 6276 6179 1 1416 34 0 0 0 chr13 109051554 109051588 -11232724 + AT_rich Low_complexity Low_complexity 1 34 0 1 2 565 274 188 73 chr13 109051718 109052250 -11232062 - L1MA4 LINE L1 -363 5937 5345 1 1417 315 0 0 0 chr13 109052266 109052301 -11232011 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 1 1417 1067 90 0 20 chr13 109052301 109052439 -11231873 - B1_Mus2 SINE Alu -9 138 2 1 1417 200 270 53 26 chr13 109052659 109052735 -11231577 - MIRb SINE MIR -93 175 98 1 1417 526 266 204 12 chr13 109052834 109053012 -11231300 + B4 SINE B4 1 223 -69 1 1417 297 0 0 0 chr13 109053012 109053045 -11231267 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 1 1417 526 266 204 12 chr13 109053045 109053106 -11231206 + B4 SINE B4 224 285 -7 1 1417 535 238 0 32 chr13 109054118 109054244 -11230068 - B3 SINE B2 -92 124 3 1 1417 567 308 85 20 chr13 109054417 109054758 -11229554 + L2 LINE L2 2096 2458 -961 1 1417 536 42 0 14 chr13 109055067 109055139 -11229173 + (CA)n Simple_repeat Simple_repeat 2 72 0 1 1417 231 340 39 58 chr13 109056369 109056488 -11227824 - MLT1A0 LTR MaLR -171 194 78 1 1417 3523 23 2 0 chr13 109056488 109056883 -11227429 + MTA_Mm LTR MaLR 1 396 0 1 1417 231 340 39 58 chr13 109056883 109056919 -11227393 - MLT1A0 LTR MaLR -288 77 43 1 1417 235 333 14 0 chr13 109057021 109057093 -11227219 - ID_B1 SINE B4 -71 153 81 1 1417 1376 141 9 5 chr13 109059170 109059391 -11224921 - URR1A DNA MER1_type -3 223 2 1 1417 433 215 21 21 chr13 109059737 109059832 -11224480 + PB1D10 SINE Alu 22 116 -1 1 1417 1166 283 108 6 chr13 109061122 109061305 -11223007 + L1MB3 LINE L1 5588 5788 -395 1 1417 258 32 0 0 chr13 109061305 109061336 -11222976 + (CA)n Simple_repeat Simple_repeat 1 31 0 1 1417 1166 283 108 6 chr13 109061336 109061678 -11222634 + L1MB3 LINE L1 5789 6166 -17 1 1417 906 87 14 21 chr13 109061693 109061834 -11222478 - B1_Mur4 SINE Alu 0 150 11 1 1417 387 89 0 0 chr13 109061840 109061896 -11222416 + (TC)n Simple_repeat Simple_repeat 2 57 0 1 1417 247 186 0 0 chr13 109062760 109062803 -11221509 - MER5A DNA MER1_type 0 189 147 1 1417 325 247 73 31 chr13 109062793 109062889 -11221423 + PB1D7 SINE Alu 20 119 -1 1 1417 301 259 19 131 chr13 109062930 109062977 -11221335 - MER5A DNA MER1_type -38 151 117 1 1417 880 202 107 34 chr13 109062977 109063182 -11221130 - URR1B DNA MER1_type -4 221 2 1 1417 301 259 19 131 chr13 109063182 109063294 -11221018 - MER5A DNA MER1_type -73 116 10 1 1417 199 322 114 38 chr13 109063310 109063468 -11220844 - MER5B DNA MER1_type -8 170 1 1 1417 24 32 0 0 chr13 109064137 109064168 -11220144 + AT_rich Low_complexity Low_complexity 1 31 0 1 1417 232 231 48 95 chr13 109065010 109065115 -11219197 - MLT1A1 LTR MaLR -4 404 305 1 1417 246 32 0 0 chr13 109065509 109065540 -11218772 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1417 241 345 0 89 chr13 109066249 109066373 -11217939 + MER2B DNA MER2_type 195 307 -29 1 1417 28 0 0 0 chr13 109067265 109067293 -11217019 + AT_rich Low_complexity Low_complexity 1 28 0 1 1417 1036 161 29 92 chr13 109067528 109067768 -11216544 - URR1A DNA MER1_type 0 226 2 1 1417 494 202 112 48 chr13 109068301 109068426 -11215886 + RSINE1 SINE B4 14 146 -19 1 1417 264 100 0 0 chr13 109068429 109068469 -11215843 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1417 717 307 59 26 chr13 109068995 109069450 -11214862 + L1ME3 LINE L1 5660 6162 0 1 1417 588 14 0 0 chr13 109069962 109070031 -11214281 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 1 1417 207 0 0 0 chr13 109071129 109071152 -11213160 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 1 1417 472 309 0 0 chr13 109071328 109071467 -11212845 + ID_B1 SINE B4 85 223 -1 1 1417 466 202 21 31 chr13 109071806 109071903 -11212409 + RSINE1 SINE B4 2 97 -68 1 1417 369 0 0 0 chr13 109071954 109071995 -11212317 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1417 353 333 16 33 chr13 109072173 109072294 -11212018 - PB1 SINE Alu -8 119 1 1 1417 360 0 0 0 chr13 109073955 109073995 -11210317 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1417 26 0 0 0 chr13 109074407 109074433 -11209879 + AT_rich Low_complexity Low_complexity 1 26 0 1 1417 375 78 0 0 chr13 109075260 109075311 -11209001 + (TG)n Simple_repeat Simple_repeat 2 52 0 1 1417 805 260 50 0 chr13 109075661 109075861 -11208451 + B3 SINE B2 1 210 -6 1 1417 200 114 0 28 chr13 109076121 109076157 -11208155 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1 1417 1192 68 0 0 chr13 109076161 109076308 -11208004 - B1_Mm SINE Alu 0 147 1 1 1417 802 118 224 0 chr13 109076826 109076987 -11207325 - URR1A DNA MER1_type -23 203 7 1 1417 689 239 0 32 chr13 109077104 109077260 -11207052 + RSINE1 SINE B4 3 153 -12 1 1417 211 130 37 0 chr13 109077532 109077586 -11206726 + CT-rich Low_complexity Low_complexity 1 56 0 1 1417 228 158 31 31 chr13 109077586 109077684 -11206628 + (TA)n Simple_repeat Simple_repeat 2 99 0 1 1417 278 148 19 0 chr13 109077737 109077791 -11206521 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 1 1417 654 224 201 0 chr13 109077792 109077966 -11206346 - ID_B1 SINE B4 -15 209 1 1 1417 227 256 0 0 chr13 109078227 109078270 -11206042 + polypurine Low_complexity Low_complexity 4 46 0 1 1417 2179 108 0 0 chr13 109078453 109078759 -11205553 + L1_Mus3 LINE L1 6020 6325 -313 1 1417 733 94 23 8 chr13 109078759 109078888 -11205424 + L1_Mus3 LINE L1 6496 6626 -12 1 1417 531 0 0 0 chr13 109078888 109078947 -11205365 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 1417 290 286 73 26 chr13 109079385 109079536 -11204776 + MER46C DNA MER2_type 62 219 -119 1 1417 405 0 0 0 chr13 109079666 109079711 -11204601 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1417 188 35 35 0 chr13 109080198 109080227 -11204085 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1 1417 1228 48 0 0 chr13 109080227 109080372 -11203940 - B1_Mm SINE Alu -2 145 1 1 1417 320 289 22 0 chr13 109080619 109080709 -11203603 - Lx7 LINE L1 -400 7296 7205 1 1417 1607 194 48 145 chr13 109080796 109081259 -11203053 - Lx6 LINE L1 -173 7287 6870 1 1417 458 256 99 15 chr13 109082015 109082146 -11202166 + B3A SINE B2 34 175 -23 1 1417 192 77 0 0 chr13 109082173 109082199 -11202113 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1417 645 266 75 5 chr13 109082248 109082448 -11201864 - B3 SINE B2 0 216 3 1 1417 948 252 47 16 chr13 109082448 109082702 -11201610 + MTE2b LTR MaLR 106 367 -12 1 1417 858 244 10 0 chr13 109083121 109083318 -11200994 - ID_B1 SINE B4 -21 203 5 1 1417 1041 249 134 66 chr13 109083422 109083907 -11200405 - RLTR11A2 LTR ERVK 0 527 10 1 1417 649 142 30 0 chr13 109083912 109084046 -11200266 + (TATG)n Simple_repeat Simple_repeat 3 140 0 1 1417 455 298 34 34 chr13 109084046 109084164 -11200148 - RSINE1 SINE B4 0 165 48 1 1417 904 249 124 11 chr13 109084223 109084577 -11199735 + L1MB2 LINE L1 5601 5994 -177 1 1417 325 256 0 55 chr13 109084594 109084685 -11199627 + MER57A-int LTR ERV1 5798 5883 -304 1 1417 454 216 0 21 chr13 109084687 109084829 -11199483 + (TATG)n Simple_repeat Simple_repeat 4 142 0 1 1417 2032 113 3 59 chr13 109084848 109085185 -11199127 - ORR1A3 LTR MaLR -8 318 1 1 1417 453 148 0 0 chr13 109085202 109085283 -11199029 + (TA)n Simple_repeat Simple_repeat 2 82 0 1 1417 188 135 27 0 chr13 109085276 109085313 -11198999 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1417 26 30 0 0 chr13 109085805 109085838 -11198474 + AT_rich Low_complexity Low_complexity 1 33 0 1 1417 2111 145 3 0 chr13 109085956 109086281 -11198031 - ORR1A3 LTR MaLR 0 326 1 1 1417 426 202 49 11 chr13 109086293 109086388 -11197924 - PB1 SINE Alu -4 123 23 1 1417 252 288 0 29 chr13 109086453 109086521 -11197791 - ID_B1 SINE B4 -10 214 149 1 1417 297 285 47 38 chr13 109086555 109086660 -11197652 - PB1D9 SINE Alu -1 119 14 1 1417 2671 174 61 4 chr13 109086682 109087173 -11197139 - RMER1B Other Other -11 1055 537 1 1417 718 113 24 24 chr13 109087214 109087341 -11196971 + B1_Mus1 SINE Alu 22 148 0 1 1417 249 196 0 0 chr13 109087341 109087397 -11196915 + A-rich Low_complexity Low_complexity 6 61 0 1 1417 306 238 55 76 chr13 109088915 109089033 -11195279 + B1F1 SINE Alu 2 117 0 1 1417 240 221 0 49 chr13 109089133 109089214 -11195098 + (TATG)n Simple_repeat Simple_repeat 4 80 0 1 1417 207 224 11 60 chr13 109089223 109089408 -11194904 + (TG)n Simple_repeat Simple_repeat 1 176 0 1 1417 266 39 18 55 chr13 109089496 109089551 -11194761 + (TG)n Simple_repeat Simple_repeat 2 54 0 1 1417 499 206 78 31 chr13 109089925 109090081 -11194231 + MER5A DNA MER1_type 1 163 -26 1 1417 537 179 29 15 chr13 109090149 109090285 -11194027 + CT-rich Low_complexity Low_complexity 2 139 0 1 1417 317 257 140 19 chr13 109090286 109090393 -11193919 - PB1D7 SINE Alu 0 120 1 1 1417 231 204 0 0 chr13 109091537 109091591 -11192721 + GA-rich Low_complexity Low_complexity 4 57 0 1 1417 639 266 74 128 chr13 109092854 109093151 -11191161 - B4A SINE B4 -10 282 2 1 1417 382 289 54 48 chr13 109093820 109093987 -11190325 - MLT1E3 LTR MaLR 0 624 457 1 1417 269 300 54 54 chr13 109094267 109094415 -11189897 - MLT1E3 LTR MaLR -427 197 50 1 1417 238 206 108 14 chr13 109094437 109094511 -11189801 + MLT2B4 LTR ERVL 12 92 -464 1 1417 345 283 11 0 chr13 109094511 109094603 -11189709 + (TG)n Simple_repeat Simple_repeat 1 93 0 2 1417 480 222 116 20 chr13 109095063 109095210 -11189102 + MTD LTR MaLR 65 225 -194 2 1417 331 218 0 19 chr13 109095219 109095322 -11188990 + GA-rich Low_complexity Low_complexity 1 101 0 2 1417 1091 90 6 22 chr13 109095334 109095516 -11188796 + (GGA)n Simple_repeat Simple_repeat 2 180 0 2 1417 610 194 128 22 chr13 109095516 109095685 -11188627 + MTD LTR MaLR 229 417 -2 2 1417 773 243 125 27 chr13 109095723 109095775 -11188537 - L1MA5 LINE L1 -5 6295 6237 2 1417 189 0 0 0 chr13 109095775 109095796 -11188516 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1417 773 239 269 23 chr13 109095796 109096288 -11188024 - L1MA5 LINE L1 -64 6236 5626 2 1417 713 236 57 5 chr13 109097244 109097436 -11186876 - B3 SINE B2 -12 204 3 2 1417 310 333 20 0 chr13 109097466 109097568 -11186744 - PB1D10 SINE Alu -11 106 3 2 1417 213 39 0 0 chr13 109097621 109097647 -11186665 + (TG)n Simple_repeat Simple_repeat 1 26 0 2 1417 356 284 9 47 chr13 109097663 109097770 -11186542 - RSINE1 SINE B4 -10 155 53 2 1417 222 62 0 0 chr13 109097789 109097821 -11186491 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2 1417 915 10 0 0 chr13 109098296 109098400 -11185912 + (TTCCC)n Simple_repeat Simple_repeat 5 108 0 2 1417 339 25 0 0 chr13 109098592 109098632 -11185680 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1417 249 246 18 0 chr13 109099183 109099240 -11185072 + (CGA)n Simple_repeat Simple_repeat 3 60 0 2 1417 4681 194 19 12 chr13 109101178 109101731 -11182581 - Lx2B LINE L1 -13 6987 6431 2 1417 2338 92 3 58 chr13 109101731 109102077 -11182235 + ORR1A2 LTR MaLR 1 327 0 2 1417 4681 194 19 12 chr13 109102077 109102463 -11181849 - Lx2B LINE L1 -570 6430 6041 2 1417 286 253 27 0 chr13 109102502 109102577 -11181735 + L2a LINE L2 3350 3426 0 2 1417 27 87 0 0 chr13 109102633 109102702 -11181610 + AT_rich Low_complexity Low_complexity 1 69 0 2 1417 283 389 47 21 chr13 109103061 109103295 -11181017 - MER20B DNA MER1_type -493 290 51 2 1417 198 0 0 0 chr13 109103340 109103362 -11180950 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 2 1417 306 0 0 0 chr13 109103423 109103457 -11180855 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 2 1417 186 255 98 0 chr13 109103626 109103677 -11180635 - L2 LINE L2 -372 3047 2992 2 1417 21 0 0 0 chr13 109103945 109103966 -11180346 + AT_rich Low_complexity Low_complexity 1 21 0 2 1417 623 260 40 0 chr13 109103985 109104158 -11180154 - B3A SINE B2 -18 180 1 2 1417 628 237 43 31 chr13 109104759 109104920 -11179392 - RSINE1 SINE B4 0 165 3 2 1417 492 257 220 87 chr13 109104961 109104986 -11179326 - Lx8 LINE L1 -124 7349 7332 2 1417 3250 39 21 3 chr13 109104986 109105375 -11178937 + MTA_Mm LTR MaLR 1 396 0 2 1417 492 257 220 87 chr13 109105375 109105626 -11178686 - Lx8 LINE L1 -142 7331 7036 2 1417 243 230 176 0 chr13 109105639 109105713 -11178599 - Lx8 LINE L1 -528 6945 6859 2 1417 281 190 0 17 chr13 109107985 109108044 -11176268 - RSINE1 SINE B4 -106 59 2 2 1417 1029 317 83 32 chr13 109108385 109108429 -11175883 - MER44B DNA MER2_type -2 548 505 2 1417 1770 150 128 9 chr13 109108429 109108772 -11175540 + ORR1C2 LTR MaLR 1 384 0 2 1417 1029 317 83 32 chr13 109108772 109109219 -11175093 - MER44B DNA MER2_type -46 504 32 2 1417 1853 242 99 87 chr13 109109245 109110055 -11174257 + RMER17B LTR ERVK 1 772 -186 2 1417 797 94 0 17 chr13 109110296 109110415 -11173897 - B1_Mm SINE Alu -30 117 1 2 1417 1599 161 66 30 chr13 109110415 109110747 -11173565 + ORR1C1 LTR MaLR 27 370 -8 2 1417 1168 84 71 22 chr13 109111392 109111574 -11172738 - B2_Mm2 SINE B2 -3 192 2 2 1417 406 240 0 133 chr13 109113365 109113485 -11170827 - PB1D10 SINE Alu -13 104 1 2 1417 290 221 26 13 chr13 109113871 109113949 -11170363 + (TCTA)n Simple_repeat Simple_repeat 2 80 0 2 1417 693 237 106 41 chr13 109115862 109116108 -11168204 - MER2 DNA MER2_type -1 344 83 2 1417 394 252 19 0 chr13 109117160 109117263 -11167049 - PB1D10 SINE Alu -12 105 1 2 1417 201 39 0 0 chr13 109117960 109117986 -11166326 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 2 1417 24 0 0 0 chr13 109118111 109118135 -11166177 + AT_rich Low_complexity Low_complexity 1 24 0 2 1417 284 0 28 0 chr13 109118169 109118205 -11166107 + (CAAAA)n Simple_repeat Simple_repeat 5 41 0 2 1417 1072 276 36 12 chr13 109118221 109118555 -11165757 - Lx7 LINE L1 -299 7397 7056 2 1417 231 242 0 167 chr13 109118907 109119021 -11165291 + L1MD LINE L1 4926 5020 -1126 2 1417 402 186 281 18 chr13 109119054 109119218 -11165094 + B3 SINE B2 5 211 -5 2 1417 269 332 127 37 chr13 109119382 109119792 -11164520 + L1M5 LINE L1 5357 5803 -376 2 1417 740 59 0 10 chr13 109120428 109120531 -11163781 + (TTTTC)n Simple_repeat Simple_repeat 4 105 0 2 1417 374 303 60 28 chr13 109120693 109120944 -11163368 - L1MA4 LINE L1 0 6300 6042 2 1417 3183 53 15 0 chr13 109121200 109121594 -11162718 - MTB LTR MaLR 0 400 1 2 1417 7580 82 11 76 chr13 109121594 109122768 -11161544 - MTB-int LTR MaLR 0 1098 1 2 1417 2714 73 16 5 chr13 109122772 109123160 -11161152 - MTB LTR MaLR -8 392 1 2 1417 743 332 110 23 chr13 109123723 109124324 -11159988 - Lx8 LINE L1 -2 7471 6819 2 1417 696 306 36 7 chr13 109124312 109124588 -11159724 + L1M2 LINE L1 4484 4767 -1376 2 1417 639 304 132 27 chr13 109124654 109125196 -11159116 - L1MA4 LINE L1 -1589 6107 5553 2 1417 451 0 34 0 chr13 109125234 109125293 -11159019 + (TG)n Simple_repeat Simple_repeat 2 62 0 2 1417 352 221 80 23 chr13 109125310 109125398 -11158914 - PB1D10 SINE Alu -19 98 6 2 1417 313 306 89 83 chr13 109125398 109125462 -11158850 - ID_B1 SINE B4 -34 185 33 2 1417 220 232 218 20 chr13 109125868 109125969 -11158343 + PB1 SINE Alu 2 122 -5 2 1417 589 200 226 11 chr13 109126315 109126492 -11157820 - B3 SINE B2 0 216 2 2 1417 832 70 0 0 chr13 109126699 109126813 -11157499 - B1_Mus1 SINE Alu 0 148 35 2 1417 244 164 79 32 chr13 109126757 109126820 -11157492 - 4.5SRNA scRNA scRNA -8 86 21 2 1417 559 213 78 7 chr13 109126906 109127048 -11157264 - RSINE1 SINE B4 -2 163 12 2 1417 234 304 67 19 chr13 109128218 109128322 -11155990 + MLT1N2 LTR MaLR 442 550 -12 2 1417 525 269 52 0 chr13 109129451 109129585 -11154727 - RSINE1 SINE B4 -19 146 6 2 1417 1610 168 86 9 chr13 109129679 109130003 -11154309 - ORR1B2 LTR MaLR -9 358 10 2 1417 239 353 100 8 chr13 109130719 109130839 -11153473 - MER58B DNA MER1_type 0 341 211 2 1417 562 200 73 30 chr13 109131916 109132081 -11152231 - B2_Mm2 SINE B2 -23 172 1 2 1417 186 43 0 0 chr13 109132282 109132305 -11152007 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1417 486 45 303 0 chr13 109132305 109132394 -11151918 - B1_Mur3 SINE Alu -11 138 23 2 1417 16230 134 13 7 chr13 109132503 109135942 -11148370 - Lx LINE L1 0 6654 3199 2 1417 2630 104 0 11 chr13 109135941 109136311 -11148001 - MusHAL1 LINE L1 -2981 373 8 2 1417 204 143 0 28 chr13 109136558 109136594 -11147718 + (CATATA)n Simple_repeat Simple_repeat 6 40 0 2 1417 477 257 80 0 chr13 109136970 109137083 -11147229 - B3A SINE B2 -75 123 2 2 1417 29 28 0 0 chr13 109137139 109137175 -11147137 + AT_rich Low_complexity Low_complexity 1 36 0 2 1417 1015 203 10 30 chr13 109137671 109137874 -11146438 - B3 SINE B2 -12 204 6 2 1417 392 145 43 0 chr13 109137964 109138081 -11146231 - RMER17D LTR ERVK -395 494 373 2 1417 296 300 157 34 chr13 109138085 109138594 -11145718 - L1ME3B LINE L1 -334 5906 5317 2 1417 306 67 0 0 chr13 109139079 109139124 -11145188 + (TG)n Simple_repeat Simple_repeat 1 45 0 2 1417 700 276 41 5 chr13 109139139 109139336 -11144976 - B4A SINE B4 -88 204 1 2 1417 399 243 52 146 chr13 109139979 109140191 -11144121 - MLT1G3 LTR MaLR -403 192 1 2 1417 389 288 80 12 chr13 109140284 109140503 -11143809 - MLT1G3-int LTR MaLR -340 1149 794 2 1417 926 280 47 75 chr13 109141261 109141647 -11142665 + MER21B LTR ERV1 407 781 -82 2 1417 232 314 75 79 chr13 109142405 109142633 -11141679 - MLT1G3 LTR MaLR -284 271 45 2 1417 305 327 110 24 chr13 109143042 109143296 -11141016 - L1M5 LINE L1 -1409 4737 4462 2 1417 1241 283 63 34 chr13 109143362 109143866 -11140446 - Lx8 LINE L1 0 7473 6955 2 1417 433 263 16 7 chr13 109144705 109144816 -11139496 + PB1D10 SINE Alu 3 113 -7 2 1417 294 284 0 13 chr13 109144820 109144895 -11139417 + GA-rich Low_complexity Low_complexity 2 75 0 2 1417 1080 269 128 21 chr13 109145317 109145787 -11138525 + Lx8 LINE L1 6878 7397 -76 2 1417 1197 49 0 0 chr13 109145842 109145986 -11138326 + B1_Mus1 SINE Alu 1 144 -4 2 1417 192 77 0 0 chr13 109145987 109146013 -11138299 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 2 1417 204 111 0 0 chr13 109146095 109146131 -11138181 + (TG)n Simple_repeat Simple_repeat 1 36 0 2 1417 348 246 126 7 chr13 109146137 109146272 -11138040 - B3A SINE B2 -47 151 1 2 1417 273 272 86 19 chr13 109147022 109147127 -11137185 + PB1 SINE Alu 13 124 -3 2 1417 384 290 53 8 chr13 109147147 109147279 -11137033 + B1F1 SINE Alu 1 138 -11 2 1417 230 311 141 55 chr13 109147756 109148011 -11136301 + Lx8 LINE L1 7193 7469 -4 2 1417 297 51 0 0 chr13 109148330 109148369 -11135943 + (T)n Simple_repeat Simple_repeat 1 39 0 2 1417 206 0 69 0 chr13 109148962 109148991 -11135321 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1417 5505 80 14 13 chr13 109149476 109150237 -11134075 - L1_Mus3 LINE L1 -1 6637 5876 2 1417 1232 156 5 5 chr13 109150237 109150450 -11133862 + L1_Mm LINE L1 4104 4316 -1567 2 1417 364 204 119 10 chr13 109150462 109150581 -11133731 + B1F SINE Alu 6 149 0 2 1417 525 231 136 0 chr13 109151361 109151508 -11132804 + B3A SINE B2 1 167 -31 2 1417 441 0 0 0 chr13 109151509 109151558 -11132754 + (CA)n Simple_repeat Simple_repeat 1 49 0 2 1417 247 346 0 0 chr13 109152334 109152412 -11131900 + C-rich Low_complexity Low_complexity 1 78 0 2 1417 28 29 0 0 chr13 109152758 109152793 -11131519 + AT_rich Low_complexity Low_complexity 1 35 0 2 1417 225 264 21 52 chr13 109152802 109152898 -11131414 - ID_B1 SINE B4 -48 176 84 2 1417 669 297 29 22 chr13 109153183 109153455 -11130857 + B4A SINE B4 1 274 -18 2 1417 924 92 0 0 chr13 109153503 109153644 -11130668 + (CA)n Simple_repeat Simple_repeat 1 141 0 3 1417 1225 136 20 116 chr13 109154077 109154209 -11130103 - URR1A DNA MER1_type 0 226 117 3 1417 1104 74 0 0 chr13 109154209 109154344 -11129968 - B1_Mus2 SINE Alu -10 137 3 3 1417 1225 136 20 116 chr13 109154344 109154461 -11129851 - URR1A DNA MER1_type -110 116 1 3 1417 201 74 0 0 chr13 109154597 109154624 -11129688 + (TTCG)n Simple_repeat Simple_repeat 2 28 0 3 1417 861 136 0 0 chr13 109154624 109154764 -11129548 + (TC)n Simple_repeat Simple_repeat 2 141 0 3 1417 5430 84 37 4 chr13 109154768 109155529 -11128783 - L1_Mus4 LINE L1 -4 6632 5847 3 1417 4230 174 75 27 chr13 109155535 109156467 -11127845 - RLTR13C1 LTR ERVK -6 977 1 3 1417 4009 98 2 0 chr13 109156467 109157005 -11127307 - L1_Mm LINE L1 -31 5852 5314 3 1417 460 286 180 26 chr13 109157006 109157200 -11127112 - ID_B1 SINE B4 0 224 1 3 1417 327 198 15 2 chr13 109157458 109157532 -11126780 - PB1D10 SINE Alu -25 124 45 3 1417 252 59 0 0 chr13 109158228 109158262 -11126050 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 3 1417 561 266 32 5 chr13 109158262 109158447 -11125865 - B3A SINE B2 0 198 9 3 1417 253 174 0 0 chr13 109158608 109158658 -11125654 - ID4_ SINE ID -62 90 41 3 1417 465 19 0 0 chr13 109158875 109158929 -11125383 + (TG)n Simple_repeat Simple_repeat 1 54 0 3 1417 198 0 0 0 chr13 109158929 109158950 -11125362 + (GA)n Simple_repeat Simple_repeat 1 22 0 3 1417 663 95 0 0 chr13 109159737 109159842 -11124470 + (TG)n Simple_repeat Simple_repeat 1 105 0 3 1417 338 338 56 14 chr13 109159863 109160007 -11124305 - RSINE1 SINE B4 -14 151 2 3 1417 549 222 69 44 chr13 109160452 109160612 -11123700 - RSINE1 SINE B4 -1 164 1 3 1417 567 29 0 0 chr13 109161368 109161437 -11122875 + (TC)n Simple_repeat Simple_repeat 2 70 0 3 1417 180 176 0 0 chr13 109161437 109161471 -11122841 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1417 504 253 163 0 chr13 109161886 109162052 -11122260 - B3A SINE B2 -4 194 2 3 1417 1740 190 90 25 chr13 109163088 109163444 -11120868 - Lx5 LINE L1 0 7050 6672 3 1417 3022 114 9 0 chr13 109163445 109163884 -11120428 + L1_Mur2 LINE L1 5268 5710 -167 3 1417 39 22 0 0 chr13 109164196 109164242 -11120070 + AT_rich Low_complexity Low_complexity 1 46 0 3 1417 315 49 0 0 chr13 109164402 109164443 -11119869 + (TC)n Simple_repeat Simple_repeat 2 42 0 3 1417 1471 275 116 67 chr13 109164492 109165267 -11119045 - Lx8 LINE L1 -189 7284 6472 3 1417 246 95 0 0 chr13 109165770 109165812 -11118500 + (T)n Simple_repeat Simple_repeat 1 42 0 3 1417 310 276 0 0 chr13 109166193 109166269 -11118043 - RSINE1 SINE B4 -6 159 84 3 1417 358 243 91 49 chr13 109166434 109166577 -11117735 - B1F1 SINE Alu 0 149 1 3 1417 468 257 35 35 chr13 109166450 109166595 -11117717 - ID_B1 SINE B4 -13 211 67 3 1417 426 20 0 0 chr13 109167082 109167133 -11117179 + (TG)n Simple_repeat Simple_repeat 1 51 0 3 1417 449 250 36 27 chr13 109167464 109167575 -11116737 + PB1D10 SINE Alu 4 115 -2 3 1417 592 280 88 82 chr13 109170167 109170220 -11114092 + MTE2b LTR MaLR 1 51 -328 3 1417 971 162 168 0 chr13 109170220 109170399 -11113913 + B3 SINE B2 1 209 -7 3 1417 592 280 88 82 chr13 109170399 109170722 -11113590 + MTE2b LTR MaLR 52 379 0 3 1417 491 306 67 13 chr13 109170820 109170969 -11113343 - RSINE1 SINE B4 0 165 9 3 1417 386 248 9 27 chr13 109171150 109171262 -11113050 - L1MA6 LINE L1 -314 5986 5877 3 1417 242 258 15 0 chr13 109171265 109171331 -11112981 + B1F SINE Alu 18 84 -65 3 1417 343 250 291 11 chr13 109171333 109171556 -11112756 - L1MA6 LINE L1 -1098 5045 4748 3 1417 502 171 314 0 chr13 109171556 109171696 -11112616 - B3A SINE B2 -12 186 3 3 1417 343 250 291 11 chr13 109171696 109171747 -11112565 - L1MA6 LINE L1 -1396 4747 4695 3 1417 323 304 88 71 chr13 109171937 109172220 -11112092 - B4 SINE B4 -4 288 1 3 1417 751 232 193 0 chr13 109172314 109172495 -11111817 - B3 SINE B2 0 216 1 3 1417 198 0 0 0 chr13 109172531 109172553 -11111759 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1417 198 0 0 0 chr13 109172871 109172893 -11111419 + (GGGA)n Simple_repeat Simple_repeat 1 22 0 3 1417 202 351 0 0 chr13 109174065 109174122 -11110190 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1417 36 53 0 0 chr13 109174343 109174400 -11109912 + AT_rich Low_complexity Low_complexity 1 57 0 3 1417 220 226 65 108 chr13 109175508 109175647 -11108665 + MIR SINE MIR 20 152 -110 3 1417 553 226 13 20 chr13 109175903 109176052 -11108260 - B1F SINE Alu -1 148 1 3 1417 217 324 40 0 chr13 109177499 109177573 -11106739 - RSINE1 SINE B4 0 165 89 3 1417 224 152 0 21 chr13 109179357 109179404 -11104908 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 3 1417 270 0 0 0 chr13 109179746 109179776 -11104536 + (TA)n Simple_repeat Simple_repeat 1 30 0 3 1417 224 315 0 36 chr13 109179939 109180051 -11104261 + CT-rich Low_complexity Low_complexity 3 110 0 3 1417 189 154 0 0 chr13 109180320 109180359 -11103953 + (TG)n Simple_repeat Simple_repeat 1 39 0 3 1417 1019 253 151 0 chr13 109180754 109180870 -11103442 + MTD LTR MaLR 1 118 -301 3 1417 204 40 0 0 chr13 109180870 109180895 -11103417 + (ATTG)n Simple_repeat Simple_repeat 3 27 0 3 1417 1019 253 151 0 chr13 109180895 109181142 -11103170 + MTD LTR MaLR 119 418 -1 3 1417 303 0 64 0 chr13 109181522 109181569 -11102743 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1417 272 248 171 38 chr13 109181583 109181688 -11102624 - RSINE1 SINE B4 -43 122 4 3 1417 1536 182 89 41 chr13 109181788 109182182 -11102130 + RMER10A LTR ERVL 11 423 -19 3 1417 468 51 0 0 chr13 109182182 109182241 -11102071 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 3 1417 305 273 217 17 chr13 109182256 109182431 -11101881 + MLT1F2 LTR MaLR 293 502 -58 3 177 737 242 118 38 chr13 109182718 109182980 -11101332 - B4A SINE B4 -9 283 1 3 1418 314 244 7 0 chr13 109183130 109183210 -11101102 - PB1D10 SINE Alu -3 117 35 3 1418 666 295 41 29 chr13 109183603 109184037 -11100275 - L1MA5A LINE L1 -369 5931 5488 3 1418 42046 8 1 0 chr13 109184525 109191084 -11093228 - L1Md_A LINE L1 0 6582 225 3 1418 4401 139 11 23 chr13 109191082 109191818 -11092494 - L1_Mm LINE L1 -855 5028 4302 3 1418 3125 77 7 25 chr13 109191823 109192285 -11092027 + L1_Mus4 LINE L1 6194 6636 0 3 1418 267 31 0 0 chr13 109192565 109192597 -11091715 + (TTA)n Simple_repeat Simple_repeat 2 33 0 3 1418 407 201 8 11 chr13 109193122 109193219 -11091093 - PB1 SINE Alu -182 132 30 3 1418 748 199 187 6 chr13 109193245 109193427 -11090885 + B3 SINE B2 2 216 0 3 1418 215 157 20 0 chr13 109195115 109195166 -11089146 + CT-rich Low_complexity Low_complexity 3 54 0 3 1418 746 268 135 59 chr13 109195223 109195947 -11088365 - L1M2 LINE L1 -539 5761 4978 3 1418 768 272 44 7 chr13 109196086 109196432 -11087880 - L1M2 LINE L1 -1158 4985 4555 3 1418 649 301 78 31 chr13 109196431 109196753 -11087559 + L1M3 LINE L1 4054 4390 -1750 3 1418 24 0 0 0 chr13 109197398 109197422 -11086890 + AT_rich Low_complexity Low_complexity 1 24 0 3 1418 2720 256 60 52 chr13 109198476 109199295 -11085017 - Lx8 LINE L1 -2 7471 6639 3 1418 1415 199 48 31 chr13 109199295 109199648 -11084664 + RLTR10D LTR ERVK 1 359 0 3 1418 2720 256 60 52 chr13 109199648 109199693 -11084619 - Lx8 LINE L1 -835 6638 6601 3 1418 973 271 18 0 chr13 109199802 109200020 -11084292 - Lx8 LINE L1 -1054 6419 6198 3 1418 1044 89 41 13 chr13 109200020 109200483 -11083829 + (TCTA)n Simple_repeat Simple_repeat 1 475 0 3 1418 1333 179 30 6 chr13 109200651 109201087 -11083225 + RLTR20C LTR ERVK 1 534 0 3 1418 1290 267 59 36 chr13 109201091 109201406 -11082906 - Lx8 LINE L1 -153 6003 5647 3 1418 1216 222 162 8 chr13 109201406 109201769 -11082543 - MTD LTR MaLR 0 419 1 3 1418 1290 277 73 19 chr13 109201769 109202029 -11082283 - Lx8 LINE L1 -234 5646 5377 3 1418 184 59 29 29 chr13 109202435 109202470 -11081842 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 3 1418 22 56 0 0 chr13 109202501 109202537 -11081775 + AT_rich Low_complexity Low_complexity 1 36 0 3 1418 1248 76 29 11 chr13 109202742 109202916 -11081396 + B2_Mm1t SINE B2 3 179 -14 3 1418 296 127 0 68 chr13 109202982 109203041 -11081271 + B2_Mm2 SINE B2 47 101 -94 3 1418 21 0 0 0 chr13 109203116 109203137 -11081175 + AT_rich Low_complexity Low_complexity 1 21 0 3 1418 207 0 0 0 chr13 109203472 109203495 -11080817 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 3 1418 1013 231 35 13 chr13 109203495 109203727 -11080585 - Lx5 LINE L1 -21 7029 6793 3 1418 227 309 79 8 chr13 109204399 109204526 -11079786 + LTR41B LTR ERVL 598 733 -25 3 1418 822 362 72 26 chr13 109205205 109205244 -11079068 - MLT1F LTR MaLR -26 522 485 3 1418 2138 114 6 64 chr13 109205244 109205589 -11078723 + ORR1A3 LTR MaLR 2 326 0 3 1418 822 362 72 26 chr13 109205589 109206046 -11078266 - MLT1F LTR MaLR -64 484 3 3 1418 953 237 27 52 chr13 109206165 109206530 -11077782 - RLTR15 LTR ERVK -3 356 1 3 1418 32 26 0 0 chr13 109206634 109206673 -11077639 + AT_rich Low_complexity Low_complexity 1 39 0 3 1418 1102 79 0 0 chr13 109206726 109206878 -11077434 - B2_Mm2 SINE B2 -43 152 1 3 1418 337 331 14 0 chr13 109207728 109207867 -11076445 - MLT1G3 LTR MaLR -78 517 377 3 1418 413 264 0 19 chr13 109207870 109207978 -11076334 - PB1D7 SINE Alu 0 120 15 3 1418 2159 171 19 60 chr13 109208273 109208741 -11075571 + Lx LINE L1 6205 6653 -1 3 1418 1130 43 0 0 chr13 109209347 109209487 -11074825 - L1_Mus1 LINE L1 0 6567 6428 3 1418 385 248 7 94 chr13 109209523 109209661 -11074651 + LTR37B LTR ERV1 340 465 -3 3 1418 614 292 104 15 chr13 109209672 109210009 -11074303 - Lx9 LINE L1 -82 7562 7196 3 1418 279 153 352 34 chr13 109210446 109210534 -11073778 + RSINE1 SINE B4 2 117 -48 3 1418 342 0 0 0 chr13 109210539 109210577 -11073735 + (CA)n Simple_repeat Simple_repeat 2 39 0 3 1418 456 312 52 0 chr13 109210607 109210780 -11073532 - B3A SINE B2 -9 189 8 3 1418 210 204 0 39 chr13 109211497 109211548 -11072764 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1418 3331 124 41 112 chr13 109212112 109212885 -11071427 - RMER6A LTR ERVK -1 755 38 3 1418 266 285 65 58 chr13 109214331 109214469 -11069843 - MER5A DNA MER1_type 0 189 51 4 1418 295 319 8 40 chr13 109214694 109214818 -11069494 + RMER4A LTR ERVK 6 125 -341 4 1418 252 0 0 0 chr13 109215049 109215077 -11069235 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 1418 224 214 0 79 chr13 109215424 109215500 -11068812 + A-rich Low_complexity Low_complexity 1 70 0 4 1418 268 220 269 8 chr13 109217524 109217643 -11066669 + L1M4 LINE L1 5579 5728 -446 4 1418 189 0 0 0 chr13 109217643 109217664 -11066648 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1418 241 318 59 25 chr13 109217686 109217889 -11066423 + Arthur1 DNA Tip100 1200 1409 -2538 4 1418 232 259 86 0 chr13 109217988 109218069 -11066243 + Lx9 LINE L1 7405 7492 -152 4 1418 226 210 59 20 chr13 109218083 109218185 -11066127 + Lx9 LINE L1 7535 7640 -4 4 1418 559 315 67 0 chr13 109218327 109218565 -11065747 + Arthur1 DNA Tip100 1428 1681 -2266 4 1418 255 271 73 45 chr13 109218538 109218716 -11065596 + Arthur1 DNA Tip100 3610 3792 -155 4 1418 28 95 0 0 chr13 109218816 109218900 -11065412 + AT_rich Low_complexity Low_complexity 1 84 0 4 1418 23 0 0 0 chr13 109219355 109219378 -11064934 + GC_rich Low_complexity Low_complexity 1 23 0 4 1418 858 251 158 93 chr13 109220263 109220884 -11063428 - L1MB8 LINE L1 -2 6176 5516 4 1418 233 262 12 0 chr13 109221068 109221148 -11063164 - LTR41 LTR ERVL -2 766 686 4 1418 487 207 15 69 chr13 109221421 109221551 -11062761 + MTC LTR MaLR 5 127 -294 4 1418 1024 101 11 17 chr13 109221558 109221739 -11062573 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 4 1418 329 167 31 20 chr13 109221739 109221831 -11062481 + CT-rich Low_complexity Low_complexity 3 96 0 4 1418 496 332 67 63 chr13 109221843 109222158 -11062154 - MTE2a LTR MaLR -54 325 10 4 1418 1404 166 48 173 chr13 109222161 109222492 -11061820 + MTD LTR MaLR 99 391 -28 4 1418 2771 31 0 47 chr13 109222492 109222830 -11061482 - RLTRETN_Mm LTR ERVK 0 322 1 4 1418 1404 166 48 173 chr13 109222830 109222856 -11061456 + MTD LTR MaLR 392 411 -8 4 1418 549 110 0 0 chr13 109222908 109223008 -11061304 + (TC)n Simple_repeat Simple_repeat 1 100 0 4 1418 424 45 45 0 chr13 109223999 109224065 -11060247 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 4 1418 459 308 214 10 chr13 109224325 109224614 -11059698 + MLT2C1 LTR ERVL 2 349 -48 4 1418 282 143 0 0 chr13 109224878 109224927 -11059385 - PB1D10 SINE Alu -1 116 68 4 1418 5380 88 4 3 chr13 109226773 109227465 -11056847 + L1_Mus3 LINE L1 5946 6638 0 4 1418 834 11 0 0 chr13 109227964 109228059 -11056253 + (GAA)n Simple_repeat Simple_repeat 2 96 0 4 1418 237 132 0 0 chr13 109228589 109228627 -11055685 + (T)n Simple_repeat Simple_repeat 1 38 0 4 1418 2715 43 6 15 chr13 109228825 109229152 -11055160 + L1Md_F3 LINE L1 6261 6584 0 4 1418 286 306 71 0 chr13 109229887 109229985 -11054327 - PB1D7 SINE Alu -15 105 1 4 1418 387 0 0 0 chr13 109230477 109230520 -11053792 + (TG)n Simple_repeat Simple_repeat 1 43 0 4 1418 914 251 64 36 chr13 109231003 109231284 -11053028 + Lx8 LINE L1 6671 6959 -514 4 1418 688 259 122 31 chr13 109231559 109231814 -11052498 + Lx8 LINE L1 7158 7435 -38 4 1418 348 119 0 0 chr13 109232004 109232063 -11052249 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1418 465 226 148 35 chr13 109233876 109234018 -11050294 - MER5A1 DNA MER1_type -2 164 7 4 1418 245 309 41 0 chr13 109235179 109235276 -11049036 - L1MB4 LINE L1 -9 6171 6071 4 1418 553 264 104 14 chr13 109235288 109235499 -11048813 - L1MB4 LINE L1 -165 6015 5786 4 1418 357 154 0 0 chr13 109235518 109235609 -11048703 + (TG)n Simple_repeat Simple_repeat 2 92 0 4 1418 741 158 19 0 chr13 109235982 109236140 -11048172 + GA-rich Low_complexity Low_complexity 1 161 0 4 1418 22 35 0 0 chr13 109236704 109236733 -11047579 + AT_rich Low_complexity Low_complexity 1 29 0 4 1418 401 247 111 49 chr13 109237881 109238043 -11046269 + L1MA9 LINE L1 5374 5545 -767 4 1418 545 267 127 20 chr13 109238221 109238377 -11045935 + L1MA9 LINE L1 5988 6153 -159 4 1418 501 47 0 0 chr13 109238377 109238441 -11045871 + (CA)n Simple_repeat Simple_repeat 2 65 0 4 1418 545 267 127 20 chr13 109238441 109238529 -11045783 + L1MA9 LINE L1 6154 6258 -54 4 1418 538 94 21 0 chr13 109239033 109239129 -11045183 - Lx LINE L1 -26 6628 6531 4 1418 267 103 0 0 chr13 109239245 109239284 -11045028 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1418 198 0 0 0 chr13 109239290 109239312 -11045000 + (CA)n Simple_repeat Simple_repeat 1 22 0 4 1418 359 280 65 75 chr13 109240405 109240606 -11043706 - MIRb SINE MIR -51 217 19 4 1418 407 278 90 69 chr13 109241005 109241276 -11043036 - B4A SINE B4 -11 281 1 4 1418 254 29 0 28 chr13 109241696 109241732 -11042580 + (TTTTA)n Simple_repeat Simple_repeat 5 39 0 4 1418 705 221 53 20 chr13 109241751 109241903 -11042409 - B3 SINE B2 -58 158 2 4 1418 3665 72 6 39 chr13 109242292 109242786 -11041526 + L1_Mus3 LINE L1 6157 6634 -4 4 1418 1315 119 17 0 chr13 109243000 109243176 -11041136 + B2_Mm2 SINE B2 1 179 -16 4 1418 528 16 0 0 chr13 109243283 109243344 -11040968 + (CAA)n Simple_repeat Simple_repeat 1 61 0 4 1418 312 285 104 49 chr13 109243893 109244037 -11040275 + MER68 LTR ERVL 3 154 -409 4 1418 1236 96 0 0 chr13 109244039 109244216 -11040096 + (TCC)n Simple_repeat Simple_repeat 2 178 0 4 1418 428 250 53 8 chr13 109244237 109244370 -11039942 + Charlie1a DNA MER1_type 1311 1449 -6 4 1418 1413 176 41 59 chr13 109244430 109244720 -11039592 - RLTR17 LTR ERVK 0 692 408 4 1418 522 324 143 20 chr13 109244755 109245111 -11039201 + MER68 LTR ERVL 144 543 -20 4 1418 500 0 17 0 chr13 109245172 109245232 -11039080 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1418 638 168 6 0 chr13 109245754 109245915 -11038397 + GA-rich Low_complexity Low_complexity 1 162 0 4 1418 599 196 8 0 chr13 109245997 109246130 -11038182 + CT-rich Low_complexity Low_complexity 1 134 0 4 1418 804 190 6 101 chr13 109246130 109246288 -11038024 - B1_Mur3 SINE Alu -6 143 1 4 1418 201 39 0 0 chr13 109246299 109246325 -11037987 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 4 1418 2587 104 150 2 chr13 109246348 109246762 -11037550 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1418 7051 36 4 11 chr13 109246762 109247599 -11036713 - IAPEz-int LTR ERVK 0 6481 5651 4 1418 2687 73 0 3 chr13 109247592 109247935 -11036377 - IAPEz-int LTR ERVK -4781 1700 1359 4 1418 3805 56 26 18 chr13 109247935 109248426 -11035886 - IAPEz-int LTR ERVK -5819 662 168 4 1418 228 321 0 0 chr13 109248426 109248479 -11035833 - RLTR27 LTR ERVK -34 275 223 4 1418 268 0 0 0 chr13 109248479 109248508 -11035804 - IAPEz-int LTR ERVK -1785 202 174 4 1418 226 308 0 0 chr13 109248508 109248560 -11035752 - RLTR27 LTR ERVK -38 271 220 4 1418 373 151 18 147 chr13 109248560 109248669 -11035643 - IAPEz-int LTR ERVK -6369 112 18 4 1418 386 73 0 0 chr13 109248652 109248707 -11035605 - IAPEz-int LTR ERVK -1930 57 3 4 1418 2563 108 144 5 chr13 109248709 109249126 -11035186 - IAPLTR2_Mm LTR ERVK 0 475 1 4 1418 2429 246 13 37 chr13 109249126 109249716 -11034596 - Lx5 LINE L1 -38 7012 6460 4 1418 5101 140 64 25 chr13 109249731 109250734 -11033578 - RLTR25A LTR ERVK -2 1026 1 4 1418 919 182 6 94 chr13 109250759 109250975 -11033337 - Lx5 LINE L1 -765 6695 6279 4 1418 202 386 34 0 chr13 109251009 109251097 -11033215 - L2c LINE L2 -5 3382 3292 4 1418 1220 244 88 149 chr13 109251733 109252278 -11032034 - MLT2B2 LTR ERVL -2 513 2 4 1418 258 163 17 11 chr13 109252434 109252524 -11031788 + B1_Mur4 SINE Alu 1 150 0 4 1418 345 336 9 17 chr13 109253661 109253776 -11030536 + PB1D10 SINE Alu 1 114 -3 4 1418 361 312 65 81 chr13 109254027 109254212 -11030100 - MIR SINE MIR -48 214 33 4 1418 180 0 0 0 chr13 109255049 109255069 -11029243 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 4 1418 210 324 62 18 chr13 109255300 109255413 -11028899 - MIRb SINE MIR -70 198 81 4 1418 421 310 8 8 chr13 109256931 109257048 -11027264 - PB1D10 SINE Alu 0 117 1 4 1418 1255 128 10 10 chr13 109258295 109258493 -11025819 + ORR1B2 LTR MaLR 170 367 0 4 1418 192 40 0 0 chr13 109259265 109259290 -11025022 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 4 1418 245 246 16 0 chr13 109259553 109259614 -11024698 - ORR1D1 LTR MaLR -289 85 24 4 1418 315 370 22 0 chr13 109260236 109260420 -11023892 + Lx8 LINE L1 6937 7124 -349 4 1418 2407 169 99 19 chr13 109260824 109261289 -11023023 - RLTR16 LTR ERVK 0 505 4 4 1418 485 154 11 0 chr13 109261335 109261426 -11022886 + CT-rich Low_complexity Low_complexity 1 92 0 4 1418 1286 302 87 70 chr13 109261788 109262421 -11021891 - MER82 DNA MER2_type 0 653 10 4 1418 3249 47 41 17 chr13 109262739 109263155 -11021157 + L1_Mus3 LINE L1 6213 6638 0 4 1418 13299 83 6 5 chr13 109263486 109266020 -11018292 + L1_Mus1 LINE L1 4032 6567 0 4 1418 762 218 40 111 chr13 109266383 109266708 -11017604 - Lx9 LINE L1 -6 7638 7337 4 1418 2485 291 62 11 chr13 109266706 109267466 -11016846 - Lx7 LINE L1 -694 7002 6204 4 1418 253 320 0 10 chr13 109267898 109268002 -11016310 + (TATATG)n Simple_repeat Simple_repeat 5 107 0 4 1418 7952 47 6 3 chr13 109268945 109270518 -11013794 - L1Md_F2 LINE L1 -1 6581 5006 4 1418 1993 50 4 0 chr13 109270517 109270759 -11013553 - L1_Mus1 LINE L1 -343 6224 5982 4 1418 205 133 22 22 chr13 109271592 109271638 -11012674 + (CAAAC)n Simple_repeat Simple_repeat 5 50 0 4 1418 216 0 0 0 chr13 109272254 109272278 -11012034 + (CA)n Simple_repeat Simple_repeat 1 24 0 4 1418 389 192 33 0 chr13 109272298 109272418 -11011894 + (TA)n Simple_repeat Simple_repeat 2 125 0 4 1418 979 312 0 84 chr13 109272454 109272846 -11011466 + Lx9 LINE L1 6959 7317 -327 4 1418 403 100 14 14 chr13 109272861 109272932 -11011380 + (GA)n Simple_repeat Simple_repeat 2 72 0 4 1418 304 289 130 19 chr13 109272932 109273147 -11011165 + Lx9 LINE L1 7343 7581 -63 4 1418 697 315 151 12 chr13 109273937 109274274 -11010038 + Lx8 LINE L1 7071 7454 -19 4 1418 1226 90 6 0 chr13 109274725 109274903 -11009409 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 4 1418 187 211 154 0 chr13 109276142 109276194 -11008118 - MIRb SINE MIR -193 75 16 4 1418 253 304 38 0 chr13 109276272 109276351 -11007961 + MIRc SINE MIR 89 170 -98 4 1418 243 0 0 0 chr13 109277759 109277786 -11006526 + (TATG)n Simple_repeat Simple_repeat 2 28 0 4 1418 7922 154 19 10 chr13 109277813 109279082 -11005230 - Lx4A LINE L1 -2 7056 5777 4 1418 259 321 0 0 chr13 109279851 109279932 -11004380 + (TG)n Simple_repeat Simple_repeat 2 82 0 4 1418 257 317 98 28 chr13 109280949 109281092 -11003220 + MIRb SINE MIR 66 218 -50 4 1418 189 195 0 0 chr13 109283929 109283970 -11000342 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 4 1418 339 267 68 13 chr13 109284694 109284782 -10999530 - MIR SINE MIR -154 108 18 4 1418 242 286 65 0 chr13 109285260 109285337 -10998975 + ID4_ SINE ID 2 83 0 4 1418 326 58 57 14 chr13 109286202 109286272 -10998040 + (CAAAA)n Simple_repeat Simple_repeat 3 75 0 4 1418 573 269 18 24 chr13 109286830 109286994 -10997318 - RMER30 DNA MER1_type 0 202 40 5 1418 408 177 0 72 chr13 109287114 109287225 -10997087 + B1_Mur4 SINE Alu 54 150 0 5 1418 24 32 0 0 chr13 109287373 109287404 -10996908 + AT_rich Low_complexity Low_complexity 1 31 0 5 1418 203 138 0 0 chr13 109287817 109287846 -10996466 + (TTC)n Simple_repeat Simple_repeat 2 30 0 5 1418 180 77 0 0 chr13 109288366 109288392 -10995920 + (A)n Simple_repeat Simple_repeat 1 26 0 5 1418 237 128 0 0 chr13 109289669 109289716 -10994596 + (T)n Simple_repeat Simple_repeat 1 47 0 5 1418 351 65 0 0 chr13 109289962 109290008 -10994304 + (TA)n Simple_repeat Simple_repeat 2 47 0 5 1418 766 0 21 0 chr13 109290362 109290456 -10993856 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 5 1418 930 169 65 83 chr13 109290938 109291216 -10993096 - Lx9 LINE L1 -7 7637 7365 5 1418 38846 30 0 0 chr13 109293419 109300071 -10984241 - L1Md_T LINE L1 0 6585 1 5 1418 1458 312 63 36 chr13 109300495 109301101 -10983211 + Tigger7 DNA MER2_type 12 633 -1858 5 1418 505 322 0 6 chr13 109301711 109301892 -10982420 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1418 290 307 8 5 chr13 109301932 109302318 -10981994 + (TG)n Simple_repeat Simple_repeat 1 387 0 5 1418 227 214 14 0 chr13 109302355 109302425 -10981887 + (TG)n Simple_repeat Simple_repeat 2 72 0 5 1418 239 313 120 10 chr13 109302434 109302534 -10981778 - Lx8 LINE L1 -352 7121 7011 5 1418 1212 304 79 39 chr13 109302651 109303012 -10981300 - Lx8 LINE L1 -858 6615 6246 5 1418 400 170 31 41 chr13 109303012 109303110 -10981202 - Lx2B LINE L1 -1 6999 6903 5 1418 1212 304 79 39 chr13 109303110 109303214 -10981098 - Lx8 LINE L1 -1228 6245 6131 5 1418 38908 32 0 1 chr13 109303401 109309027 -10975285 - L1Md_T LINE L1 0 6585 866 5 1418 811 318 82 12 chr13 109309208 109309527 -10974785 - MLT1A0 LTR MaLR -24 341 1 5 1418 246 123 15 44 chr13 109310660 109310728 -10973584 + A-rich Low_complexity Low_complexity 1 66 0 5 1418 3660 280 109 31 chr13 109310889 109310925 -10973387 - Lx8 LINE L1 -11 7462 7420 5 1418 198 0 0 0 chr13 109310925 109310947 -10973365 + (TCCC)n Simple_repeat Simple_repeat 3 24 0 5 1418 3660 280 109 31 chr13 109310947 109312088 -10972224 - Lx8 LINE L1 -54 7419 6198 5 1418 863 51 8 0 chr13 109312088 109312205 -10972107 + (TCTCCC)n Simple_repeat Simple_repeat 4 121 0 5 1418 3660 280 109 31 chr13 109312205 109312424 -10971888 - Lx8 LINE L1 -1276 6197 5957 5 1418 521 231 7 0 chr13 109312424 109312571 -10971741 + CT-rich Low_complexity Low_complexity 1 148 0 5 1418 1184 91 0 11 chr13 109312606 109312783 -10971529 + (TCTCC)n Simple_repeat Simple_repeat 4 178 0 5 1418 302 215 0 0 chr13 109312942 109313014 -10971298 - L1MA5 LINE L1 -364 5936 5848 5 1418 591 345 39 8 chr13 109313082 109313316 -10970996 + MIR SINE MIR 18 258 -4 5 177 281 332 78 88 chr13 109313852 109314136 -10970176 - B4 SINE B4 -11 281 1 5 1419 215 317 0 0 chr13 109314811 109314871 -10969441 + MIRc SINE MIR 122 181 -87 5 1419 459 0 0 0 chr13 109315991 109316042 -10968270 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1419 270 269 334 43 chr13 109316884 109317445 -10966867 - L2a LINE L2 -67 3359 2636 5 1419 856 161 61 24 chr13 109317940 109318105 -10966207 + Lx4B LINE L1 6875 7045 -13 5 1419 211 28 56 0 chr13 109318105 109318141 -10966171 + (TAA)n Simple_repeat Simple_repeat 2 39 0 5 1419 180 111 0 0 chr13 109318146 109318173 -10966139 + (CAT)n Simple_repeat Simple_repeat 3 29 0 5 1419 21 0 0 0 chr13 109318847 109318868 -10965444 + AT_rich Low_complexity Low_complexity 1 21 0 5 1419 309 239 0 69 chr13 109318899 109318971 -10965341 + ID4 SINE ID 1 67 -16 5 1419 405 0 0 0 chr13 109318975 109319020 -10965292 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1419 423 0 0 0 chr13 109319020 109319066 -10965246 + (GA)n Simple_repeat Simple_repeat 2 48 0 5 1419 228 321 12 0 chr13 109319074 109319155 -10965157 + A-rich Low_complexity Low_complexity 3 84 0 5 1419 598 167 90 13 chr13 109319418 109319573 -10964739 + URR1B DNA MER1_type 1 185 -40 5 1419 259 266 112 26 chr13 109319669 109319785 -10964527 + MIRb SINE MIR 80 205 -63 5 1419 465 50 0 0 chr13 109319828 109319888 -10964424 + (GA)n Simple_repeat Simple_repeat 1 60 0 5 1419 297 238 58 29 chr13 109320062 109320166 -10964146 + MLT1A1 LTR MaLR 302 408 0 5 1419 1364 137 18 5 chr13 109320663 109320883 -10963429 - URR1A DNA MER1_type -2 224 2 5 1419 277 295 121 40 chr13 109320885 109321058 -10963254 - L1MC4 LINE L1 -148 7894 7708 5 1419 343 319 89 0 chr13 109321475 109321610 -10962702 + MIR SINE MIR 49 195 -67 5 1419 273 57 0 0 chr13 109321735 109321770 -10962542 + (TTA)n Simple_repeat Simple_repeat 1 35 0 5 1419 195 246 90 30 chr13 109321780 109321847 -10962465 - MIRc SINE MIR -152 116 46 5 1419 2228 304 113 27 chr13 109322511 109323441 -10960871 + Lx7 LINE L1 6326 7335 -361 5 1419 269 278 12 80 chr13 109323457 109323707 -10960605 - Lx7 LINE L1 -1 7695 7463 5 1419 342 0 0 0 chr13 109323713 109323751 -10960561 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1419 261 232 41 21 chr13 109323762 109323859 -10960453 - Lx7 LINE L1 -361 7335 7237 5 1419 338 292 0 0 chr13 109323864 109323936 -10960376 + Lx8 LINE L1 7167 7238 -235 5 1419 9170 139 25 8 chr13 109323949 109325447 -10958865 - Lx4A LINE L1 0 7058 5523 5 1419 1312 107 45 0 chr13 109325697 109325875 -10958437 - B2_Mm2 SINE B2 -8 187 2 5 1419 278 259 0 0 chr13 109328456 109328514 -10955798 - B4A SINE B4 -207 85 28 5 1419 1209 87 37 11 chr13 109328534 109328558 -10955754 - B2_Mm2 SINE B2 -2 193 166 5 1419 326 22 0 0 chr13 109328558 109328604 -10955708 - L1_Mus4 LINE L1 -6 6630 6585 5 1419 1209 87 37 11 chr13 109328604 109328766 -10955546 - B2_Mm2 SINE B2 -30 165 2 5 1419 333 0 0 0 chr13 109328768 109328805 -10955507 + (TTA)n Simple_repeat Simple_repeat 2 38 0 5 1419 2298 95 6 0 chr13 109330353 109330670 -10953642 - ORR1A2 LTR MaLR -8 319 1 5 1419 229 265 71 29 chr13 109331795 109331865 -10952447 - MTEa LTR MaLR -17 362 290 5 1419 717 266 0 0 chr13 109333310 109333453 -10950859 + B1_Mur1 SINE Alu 2 144 -5 5 1419 333 218 64 0 chr13 109333866 109333944 -10950368 + ORR1E LTR MaLR 8 90 -269 5 1419 251 169 16 33 chr13 109334118 109334179 -10950133 + MTEb LTR MaLR 320 379 0 5 1419 400 272 19 0 chr13 109334179 109334282 -10950030 + MTEb-int LTR MaLR 1 105 -1475 5 1419 310 317 25 0 chr13 109337209 109337329 -10946983 + Lx7 LINE L1 6214 6336 -1360 5 1419 989 95 7 0 chr13 109337356 109337503 -10946809 + (TC)n Simple_repeat Simple_repeat 1 148 0 5 1419 351 0 0 0 chr13 109337503 109337541 -10946771 + (CA)n Simple_repeat Simple_repeat 1 39 0 5 1419 1062 249 56 0 chr13 109337569 109337838 -10946474 - Lx9 LINE L1 -197 7447 7164 5 1419 1880 314 105 8 chr13 109337839 109338814 -10945498 + Lx8 LINE L1 6400 7468 -5 5 1419 233 292 0 68 chr13 109338733 109338836 -10945476 + RMER1C Other Other 1242 1337 -5 5 1419 387 0 0 0 chr13 109339340 109339383 -10944929 + (T)n Simple_repeat Simple_repeat 1 43 0 5 1419 22 0 0 0 chr13 109339829 109339851 -10944461 + AT_rich Low_complexity Low_complexity 1 22 0 5 1419 4717 222 44 40 chr13 109339851 109341036 -10943276 - Lx6 LINE L1 -4 7456 6268 5 1419 189 0 0 0 chr13 109341265 109341286 -10943026 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 5 1419 357 62 0 0 chr13 109341946 109341994 -10942318 + (TG)n Simple_repeat Simple_repeat 1 48 0 5 1419 249 306 27 40 chr13 109344464 109344614 -10939698 - RSINE1 SINE B4 -15 150 3 5 1419 189 0 0 0 chr13 109344974 109344995 -10939317 + (T)n Simple_repeat Simple_repeat 1 21 0 5 1419 38 39 0 0 chr13 109345410 109345462 -10938850 + AT_rich Low_complexity Low_complexity 1 52 0 5 1419 608 361 12 2 chr13 109345462 109345677 -10938635 - B3A SINE B2 -1 215 1 5 1419 5258 199 38 58 chr13 109346372 109347692 -10936620 - Lx7 LINE L1 0 7696 6403 5 1419 332 218 94 47 chr13 109347711 109347923 -10936389 - Lx9 LINE L1 -5 7639 7418 5 1419 791 320 157 9 chr13 109347915 109348546 -10935766 - Lx8 LINE L1 -22 7451 6728 5 1419 663 13 0 0 chr13 109348568 109348644 -10935668 + (TC)n Simple_repeat Simple_repeat 1 76 0 5 1419 22 0 0 0 chr13 109349092 109349114 -10935198 + AT_rich Low_complexity Low_complexity 1 22 0 5 1419 198 103 0 0 chr13 109349138 109349167 -10935145 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1419 399 284 208 23 chr13 109349171 109349387 -10934925 - MTEa LTR MaLR -27 352 97 5 1419 3959 93 7 49 chr13 109349863 109350476 -10933836 + L1_Mus4 LINE L1 6050 6636 0 5 1419 779 122 34 0 chr13 109350718 109350866 -10933446 + CT-rich Low_complexity Low_complexity 3 155 0 5 1419 1087 140 30 39 chr13 109350869 109351099 -10933213 - Lx LINE L1 0 6654 6427 5 1419 2004 292 88 12 chr13 109351116 109352057 -10932255 + L1MA4 LINE L1 3697 4709 -1434 5 1419 1474 243 20 57 chr13 109352078 109352480 -10931832 - Lx6 LINE L1 0 7460 7074 5 1419 239 293 20 29 chr13 109352554 109352656 -10931656 + Lx6 LINE L1 6966 7066 -394 5 1419 647 302 84 51 chr13 109352682 109353024 -10931288 + L1MA4 LINE L1 4751 5091 -1052 5 1419 414 0 0 0 chr13 109353024 109353070 -10931242 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1419 877 300 55 45 chr13 109353070 109353724 -10930588 + L1MA4 LINE L1 5092 5780 -520 5 1419 369 0 0 0 chr13 109353744 109353785 -10930527 + (TC)n Simple_repeat Simple_repeat 1 41 0 5 1419 504 0 0 0 chr13 109353785 109353840 -10930472 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 1419 202 188 42 0 chr13 109353840 109353888 -10930424 + (CAGA)n Simple_repeat Simple_repeat 3 52 0 5 1419 413 239 10 12 chr13 109353891 109354058 -10930254 + L1MA4 LINE L1 5755 5920 -269 5 1419 918 109 0 0 chr13 109355453 109355590 -10928722 + (CA)n Simple_repeat Simple_repeat 2 138 0 5 1419 477 115 0 0 chr13 109355599 109355686 -10928626 + (GA)n Simple_repeat Simple_repeat 2 88 0 5 1419 1001 171 85 85 chr13 109356240 109356534 -10927778 - RMER1B Other Other -3 1063 770 5 1419 209 382 73 0 chr13 109357211 109357321 -10926991 + MIRb SINE MIR 137 254 -14 5 1419 5132 22 0 0 chr13 109357747 109358370 -10925942 - L1Md_T LINE L1 -186 5697 5075 5 1419 8054 5 0 0 chr13 109358370 109359257 -10925055 + L1Md_T LINE L1 5684 6570 -12 5 1419 258 250 19 0 chr13 109359518 109359570 -10924742 - BLACKJACK DNA AcHobo -2881 63 11 5 1419 208 277 43 0 chr13 109359611 109359658 -10924654 - MIRc SINE MIR -198 70 22 5 1419 269 299 142 42 chr13 109359940 109360321 -10923991 - L1MEf LINE L1 -4642 1558 1140 5 1419 9930 148 28 8 chr13 109360307 109362231 -10922081 - L1_Mur2 LINE L1 -1207 4670 2710 6 1419 1373 169 24 7 chr13 109362208 109362506 -10921806 - MusHAL1 LINE L1 -2409 303 1 6 1419 1217 194 8 4 chr13 109362499 109362763 -10921549 - L1VL4 LINE L1 -5513 789 525 6 1419 419 237 8 33 chr13 109363003 109363125 -10921187 - Tigger5 DNA MER2_type -133 2273 2155 6 1419 852 294 79 0 chr13 109363143 109363395 -10920917 - Tigger5 DNA MER2_type -2134 272 1 6 1419 1138 280 88 56 chr13 109363613 109363865 -10920447 - ORR1E LTR MaLR -6 353 93 6 1419 1210 167 9 9 chr13 109363865 109364088 -10920224 + URR1B DNA MER1_type 2 224 -1 6 1419 1138 280 88 56 chr13 109364088 109364175 -10920137 - ORR1E LTR MaLR -267 92 3 6 1419 337 272 45 0 chr13 109364447 109364597 -10919715 + B3A SINE B2 1 174 -42 6 1419 186 191 41 41 chr13 109365202 109365251 -10919061 - MER5B DNA MER1_type -45 133 85 6 1419 511 15 29 0 chr13 109365456 109365524 -10918788 + (GA)n Simple_repeat Simple_repeat 2 71 0 6 1419 23 54 0 0 chr13 109365766 109365803 -10918509 + AT_rich Low_complexity Low_complexity 1 37 0 6 1419 1352 229 40 20 chr13 109366137 109366485 -10917827 + L1VL4 LINE L1 344 698 -5604 6 1419 6336 122 21 8 chr13 109366482 109367957 -10916355 + L1_Mus4 LINE L1 5146 6635 -1 6 1419 325 367 36 42 chr13 109368462 109368627 -10915685 - MLT1J2 LTR MaLR -84 364 201 6 1419 441 0 0 0 chr13 109368896 109368945 -10915367 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1419 437 362 32 25 chr13 109369424 109369702 -10914610 + B4A SINE B4 1 280 -12 6 1419 303 250 135 35 chr13 109369979 109370120 -10914192 + MamRep564 Unknown Unknown 43 197 -160 6 1419 848 228 5 77 chr13 109371058 109371253 -10913059 + ORR1D1 LTR MaLR 1 181 -193 6 1419 537 16 0 0 chr13 109371253 109371315 -10912997 + (TC)n Simple_repeat Simple_repeat 1 62 0 6 1419 694 246 129 10 chr13 109371331 109371532 -10912780 + ORR1D1 LTR MaLR 148 372 -2 6 1419 2954 226 72 21 chr13 109371530 109372059 -10912253 + ORR1D1-int LTR MaLR 1 552 -818 6 1419 441 0 0 0 chr13 109372059 109372108 -10912204 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1419 2954 230 114 26 chr13 109372108 109372866 -10911446 + ORR1D1-int LTR MaLR 52 1246 -263 6 1419 1838 220 67 21 chr13 109373035 109373466 -10910846 - Lx6 LINE L1 -169 7291 6841 6 1419 528 248 8 8 chr13 109373975 109374093 -10910219 + MTD LTR MaLR 119 236 -183 6 1419 1780 177 21 3 chr13 109374112 109374446 -10909866 - RLTR15 LTR ERVK -19 340 1 6 1419 246 283 170 10 chr13 109374458 109374558 -10909754 + MTD LTR MaLR 247 362 -57 6 1419 558 0 0 0 chr13 109375435 109375497 -10908815 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1419 353 304 35 35 chr13 109375694 109375837 -10908475 + MIRb SINE MIR 37 179 -89 6 1419 285 294 63 49 chr13 109375995 109376138 -10908174 + MIR SINE MIR 63 207 -55 6 1419 365 0 0 0 chr13 109376220 109376263 -10908049 + L1_Mm LINE L1 5415 5457 -426 6 1419 7109 97 16 2 chr13 109376625 109377874 -10906438 - L1_Mus4 LINE L1 0 6636 5369 6 1419 8267 82 20 93 chr13 109377864 109378319 -10905993 - L1VL4 LINE L1 -1291 2268 1817 6 1419 693 112 0 27 chr13 109378319 109378429 -10905883 - BC1_Mm scRNA scRNA -44 108 2 6 1419 8267 82 20 93 chr13 109378429 109378521 -10905791 - L1VL4 LINE L1 -1291 1816 1724 6 1419 3903 5 0 0 chr13 109378521 109378953 -10905359 - L1Md_T LINE L1 0 6582 6151 6 1419 8267 99 20 53 chr13 109378953 109380619 -10903693 - L1VL4 LINE L1 -1836 1723 50 6 1419 228 315 40 14 chr13 109380637 109380711 -10903601 - LTR81B LTR ERV1? -268 1125 1050 6 1419 480 35 0 0 chr13 109380782 109380840 -10903472 + (TTTCC)n Simple_repeat Simple_repeat 3 60 0 6 1419 4160 57 0 12 chr13 109380995 109381512 -10902800 - L1_Mus2 LINE L1 -1 6565 6055 6 1419 4388 119 3 0 chr13 109382279 109382910 -10901402 + Lx2 LINE L1 6365 6997 0 6 1419 295 338 196 35 chr13 109383148 109383550 -10900762 + L2a LINE L2 2959 3425 -1 6 1419 541 294 169 79 chr13 109384169 109384626 -10899686 - MLT1G LTR MaLR 0 579 41 6 1419 970 165 97 0 chr13 109385749 109385955 -10898357 + Lx9 LINE L1 7262 7487 -157 6 1419 252 0 0 0 chr13 109386271 109386299 -10898013 + (TA)n Simple_repeat Simple_repeat 2 29 0 6 1419 315 49 0 0 chr13 109386299 109386339 -10897973 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1419 593 189 79 6 chr13 109386343 109386508 -10897804 + Lx9 LINE L1 7458 7634 -10 6 1419 802 302 61 61 chr13 109386555 109386915 -10897397 + MTEa LTR MaLR 8 367 -12 6 1419 423 153 82 0 chr13 109386915 109387013 -10897299 + Lx9 LINE L1 7379 7484 -160 6 1419 21 36 0 0 chr13 109387506 109387534 -10896778 + AT_rich Low_complexity Low_complexity 1 28 0 6 1419 1513 255 19 35 chr13 109388071 109388441 -10895871 - MTD LTR MaLR -55 364 1 6 1419 292 280 108 31 chr13 109388679 109388808 -10895504 - MER3 DNA MER1_type 0 209 71 6 1419 484 344 66 31 chr13 109389572 109389800 -10894512 + MIRb SINE MIR 2 237 -31 6 1419 5762 74 28 15 chr13 109390073 109390828 -10893484 - L1_Mus2 LINE L1 -6 6560 5796 6 1419 325 219 17 0 chr13 109391679 109391798 -10892514 + (CAT)n Simple_repeat Simple_repeat 2 122 0 6 1419 396 341 127 83 chr13 109393638 109394144 -10890168 - MLT1N2 LTR MaLR -12 550 23 6 1419 210 37 0 0 chr13 109394819 109394846 -10889466 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1419 843 86 6 32 chr13 109394857 109395013 -10889299 - RMER17B LTR ERVK -495 463 312 6 1419 302 353 0 15 chr13 109395776 109395911 -10888401 + GA-rich Low_complexity Low_complexity 1 133 0 6 1419 40520 28 1 6 chr13 109396237 109402398 -10881914 - L1Md_T LINE L1 -1 6581 458 6 1419 2477 187 62 28 chr13 109402482 109402983 -10881329 + Lx5 LINE L1 6530 7047 -3 6 1419 3819 80 6 0 chr13 109403092 109403604 -10880708 - L1_Mm LINE L1 -1413 4470 3956 6 1419 1855 55 0 0 chr13 109403604 109403821 -10880491 + L1_Mus1 LINE L1 6351 6567 0 6 1419 552 252 34 103 chr13 109403827 109404119 -10880193 - L1MA9 LINE L1 -253 6059 5788 6 1419 936 72 0 0 chr13 109405078 109405216 -10879096 + (TTTC)n Simple_repeat Simple_repeat 1 138 0 6 1419 1453 285 72 36 chr13 109406766 109407293 -10877019 - Lx8 LINE L1 -5 7468 6923 6 1419 829 258 14 23 chr13 109407669 109407883 -10876429 - B3 SINE B2 0 216 5 6 1419 1407 145 58 4 chr13 109407899 109408141 -10876171 - RLTR22_Mur LTR ERVK -4 1844 1590 6 1419 3290 138 164 24 chr13 109408388 109408979 -10875333 - RLTR22_Mur LTR ERVK -1040 808 149 6 1419 369 0 0 0 chr13 109408979 109409020 -10875292 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1419 3290 138 164 24 chr13 109409020 109409134 -10875178 - RLTR22_Mur LTR ERVK -1700 148 5 6 1419 4601 133 43 9 chr13 109409788 109410487 -10873825 - Lx LINE L1 0 6654 5932 6 1419 1704 175 20 42 chr13 109410488 109410846 -10873466 + RMER6A LTR ERVK 394 743 -13 6 1419 1738 226 25 3 chr13 109410860 109411219 -10873093 - Lx7 LINE L1 -1144 6552 6186 6 1419 392 0 21 0 chr13 109411321 109411369 -10872943 + (TCTA)n Simple_repeat Simple_repeat 3 51 0 6 1419 428 0 0 19 chr13 109411533 109411586 -10872726 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1419 675 282 171 41 chr13 109411904 109412328 -10871984 + MLT1D LTR MaLR 30 498 -7 6 1419 637 265 117 87 chr13 109412407 109412808 -10871504 - L2a LINE L2 -1 3425 3013 6 1419 3841 149 101 24 chr13 109414595 109415316 -10868996 - Lx5 LINE L1 -646 6404 5628 6 1419 3960 170 5 31 chr13 109415318 109415972 -10868340 + Lx5 LINE L1 6414 7050 0 6 1419 306 187 11 21 chr13 109415985 109416078 -10868234 + GA-rich Low_complexity Low_complexity 3 94 0 6 1419 1471 228 101 24 chr13 109417759 109418137 -10866175 + MTD LTR MaLR 13 419 0 6 1419 357 333 57 23 chr13 109418836 109419011 -10865301 + LTR16C LTR ERVL 296 476 -13 6 1419 180 0 0 0 chr13 109419148 109419168 -10865144 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 6 1419 3415 53 0 0 chr13 109419600 109419997 -10864315 + L1_Mus1 LINE L1 6170 6566 -1 6 1419 420 273 91 20 chr13 109420438 109420659 -10863653 + MIR SINE MIR 37 259 -3 6 1419 211 360 71 8 chr13 109420900 109421026 -10863286 + MIR3 SINE MIR 41 174 -34 6 1419 3419 42 0 2 chr13 109422096 109422499 -10861813 - L1Md_F2 LINE L1 -231 6351 5950 6 1419 824 99 12 92 chr13 109422496 109422786 -10861526 + L1Md_F3 LINE L1 5949 6042 -542 6 1419 6311 38 17 0 chr13 109422917 109423675 -10860637 + L1Md_F3 LINE L1 5809 6579 -5 6 1419 207 0 0 0 chr13 109423693 109423716 -10860596 + (A)n Simple_repeat Simple_repeat 1 23 0 6 1419 1015 311 97 65 chr13 109424382 109424952 -10859360 - MER77 LTR ERVL -9 598 11 6 1419 683 311 16 5 chr13 109425183 109425374 -10858938 - B3A SINE B2 -4 194 2 6 1419 269 382 155 16 chr13 109425440 109425698 -10858614 - MLT1I LTR MaLR -5 406 113 6 1419 333 270 0 123 chr13 109427334 109427448 -10856864 + PB1 SINE Alu 3 102 -25 6 1419 390 222 42 0 chr13 109427474 109427546 -10856766 + ID4 SINE ID 2 76 -7 6 1419 284 326 60 74 chr13 109428349 109428498 -10855814 - L2b LINE L2 -2 3373 3227 6 1419 227 318 99 20 chr13 109429581 109429732 -10854580 + MIR SINE MIR 68 230 -32 6 1419 510 319 54 60 chr13 109430772 109431276 -10853036 + MLT1D LTR MaLR 1 501 -4 6 1419 185 318 15 31 chr13 109431946 109432011 -10852301 - MIRb SINE MIR -179 89 26 6 1419 267 330 89 17 chr13 109432107 109432286 -10852026 - MIR SINE MIR -4 258 67 6 1419 1764 221 51 13 chr13 109432415 109432809 -10851503 - MTD LTR MaLR -8 411 3 6 1419 661 272 133 60 chr13 109433092 109433654 -10850658 + L1ME3A LINE L1 5366 5981 -192 6 1419 283 342 123 0 chr13 109434436 109434550 -10849762 - MER94 DNA AcHobo -6 128 1 6 1419 443 292 48 67 chr13 109434819 109434984 -10849328 + RSINE1 SINE B4 2 163 -2 6 1419 7992 98 2 5 chr13 109435061 109436351 -10847961 - L1_Mus3 LINE L1 -2 6636 5359 6 1419 1215 102 0 0 chr13 109436351 109436528 -10847784 + (TTCCC)n Simple_repeat Simple_repeat 4 180 0 6 1419 243 0 0 0 chr13 109436531 109436558 -10847754 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 6 1419 4784 128 1 24 chr13 109436558 109436763 -10847549 - L1_Mus3 LINE L1 -525 5358 5156 6 1419 232 219 12 47 chr13 109437059 109437145 -10847167 + (TTCTG)n Simple_repeat Simple_repeat 2 84 0 6 1419 1043 54 0 0 chr13 109438997 109439127 -10845185 - B1_Mm SINE Alu 0 147 18 6 1419 751 160 152 0 chr13 109440118 109440243 -10844069 + B1_Mur4 SINE Alu 1 144 -6 6 1419 300 230 108 0 chr13 109440462 109440536 -10843776 - HAL1-3A_ME LINE L1 -809 2049 1968 7 1419 200 34 0 33 chr13 109440996 109441026 -10843286 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 7 1419 1398 209 126 108 chr13 109441939 109442486 -10841826 - RMER4B LTR ERVK -11 574 18 7 1419 317 294 36 27 chr13 109442510 109442622 -10841690 + B4A SINE B4 1 113 -179 7 1419 775 274 71 65 chr13 109442622 109443127 -10841185 + Lx9 LINE L1 5872 6472 -1172 7 1419 489 128 0 0 chr13 109443173 109443275 -10841037 + (TA)n Simple_repeat Simple_repeat 2 103 0 7 1419 216 0 0 0 chr13 109444180 109444204 -10840108 + (T)n Simple_repeat Simple_repeat 1 24 0 7 1419 183 42 0 0 chr13 109444492 109444516 -10839796 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 177 28 48 0 0 chr13 109445107 109445149 -10839163 + AT_rich Low_complexity Low_complexity 1 42 0 7 1420 551 293 97 90 chr13 109445160 109445175 -10839137 - B4A SINE B4 0 292 278 7 1420 369 43 0 0 chr13 109445175 109445222 -10839090 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1420 551 293 97 90 chr13 109445222 109445495 -10838817 - B4A SINE B4 -15 277 3 7 1420 235 85 43 0 chr13 109445726 109445773 -10838539 + (TG)n Simple_repeat Simple_repeat 2 50 0 7 1420 435 297 0 59 chr13 109445794 109445930 -10838382 - RSINE1 SINE B4 -35 130 3 7 1420 1083 215 32 0 chr13 109446402 109446621 -10837691 + URR1A DNA MER1_type 1 226 0 7 1420 244 373 83 17 chr13 109446864 109447044 -10837268 + MIR SINE MIR 31 222 -40 7 1420 7280 74 10 0 chr13 109447332 109449059 -10835253 - L1_Mus1 LINE L1 0 6567 4842 7 1420 345 140 0 0 chr13 109450205 109450262 -10834050 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1420 330 338 58 29 chr13 109450265 109450402 -10833910 - B1F2 SINE Alu -5 144 4 7 1420 691 46 0 0 chr13 109450410 109450497 -10833815 + L1_Mus2 LINE L1 6190 6276 -290 7 1420 26 0 0 0 chr13 109450660 109450686 -10833626 + AT_rich Low_complexity Low_complexity 1 26 0 7 1420 716 310 116 45 chr13 109453102 109453473 -10830839 + L1MA5 LINE L1 1485 1888 -4961 7 1420 396 0 0 0 chr13 109453473 109453517 -10830795 + (GA)n Simple_repeat Simple_repeat 1 44 0 7 1420 716 310 116 45 chr13 109453517 109454058 -10830254 + L1MA5 LINE L1 1889 2481 -4368 7 1420 764 302 42 70 chr13 109454058 109454443 -10829869 - MTE2b LTR MaLR -3 376 3 7 1420 716 300 75 84 chr13 109454443 109454949 -10829363 + L1MA5 LINE L1 2482 2971 -3874 7 1420 320 267 28 9 chr13 109454984 109455090 -10829222 + L1MA5 LINE L1 3070 3177 -3668 7 1420 430 283 135 39 chr13 109455323 109455760 -10828552 - L1MA6 LINE L1 -394 5906 5428 7 1420 354 219 75 25 chr13 109455775 109455934 -10828378 - Lx8 LINE L1 0 7473 7307 7 1420 353 158 12 0 chr13 109455941 109456023 -10828289 + (TA)n Simple_repeat Simple_repeat 2 84 0 7 1420 522 246 27 14 chr13 109456174 109456322 -10827990 - Lx8 LINE L1 -861 6612 6463 7 1420 259 251 59 39 chr13 109456355 109456526 -10827786 - L1MA6 LINE L1 -890 5410 5233 7 1420 520 262 15 29 chr13 109456535 109456748 -10827564 - L1MA6 LINE L1 -1059 4818 4599 7 1420 340 226 84 35 chr13 109457206 109457348 -10826964 - L1MA6 LINE L1 -3266 2874 2726 7 1420 255 31 0 0 chr13 109457558 109457590 -10826722 + (TC)n Simple_repeat Simple_repeat 1 32 0 7 1420 665 261 232 6 chr13 109457818 109458304 -10826008 + L1MA5 LINE L1 3253 3848 -2997 7 1420 450 0 0 0 chr13 109458324 109458374 -10825938 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 1420 326 80 20 0 chr13 109458415 109458465 -10825847 + (TATG)n Simple_repeat Simple_repeat 4 54 0 7 1420 532 306 0 18 chr13 109458653 109458873 -10825439 + L1MA5 LINE L1 4447 4662 -2183 7 1420 262 295 17 144 chr13 109458934 109459108 -10825204 - RLTR22_Mur LTR ERVK -168 1680 1529 7 1420 2092 223 69 127 chr13 109459245 109460088 -10824224 - RLTR22_Mur LTR ERVK -1052 796 3 7 1420 715 302 25 19 chr13 109460090 109460414 -10823898 + L1MA5 LINE L1 6343 6668 -334 7 1420 381 122 0 0 chr13 109460483 109460557 -10823755 + (TA)n Simple_repeat Simple_repeat 1 74 0 7 1420 288 0 0 0 chr13 109462519 109462551 -10821761 + (TA)n Simple_repeat Simple_repeat 2 33 0 7 1420 507 175 96 67 chr13 109462612 109462747 -10821565 - MTEa LTR MaLR 0 379 241 7 1420 436 245 38 67 chr13 109462788 109462893 -10821419 - MTEa LTR MaLR -276 103 2 7 1420 278 303 39 39 chr13 109464459 109464562 -10819750 - MLT1J LTR MaLR -100 412 310 7 1420 310 308 96 32 chr13 109464532 109464601 -10819711 + ID_B1 SINE B4 12 104 -120 7 1420 486 209 8 76 chr13 109464601 109464620 -10819692 + PB1 SINE Alu 5 23 -104 7 1420 396 0 0 0 chr13 109464620 109464664 -10819648 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1420 310 308 96 32 chr13 109464664 109464763 -10819549 + ID_B1 SINE B4 105 210 -14 7 1420 562 280 45 30 chr13 109464869 109465068 -10819244 - MLT1J LTR MaLR -310 202 1 7 1420 1368 67 0 0 chr13 109466191 109466371 -10817941 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1420 314 339 50 45 chr13 109466766 109466964 -10817348 - ORR1E LTR MaLR -160 199 1 7 1420 27 0 0 0 chr13 109467287 109467314 -10816998 + AT_rich Low_complexity Low_complexity 1 27 0 7 1420 21 0 0 0 chr13 109467338 109467359 -10816953 + AT_rich Low_complexity Low_complexity 1 21 0 7 1420 403 199 353 0 chr13 109467449 109467585 -10816727 - Lx9 LINE L1 -584 7060 6877 7 1420 227 224 127 38 chr13 109467707 109467786 -10816526 - MIR SINE MIR -67 141 56 7 1420 27 0 0 0 chr13 109468658 109468685 -10815627 + AT_rich Low_complexity Low_complexity 1 27 0 7 1420 5151 51 6 0 chr13 109468688 109469330 -10814982 - L1Md_F3 LINE L1 -14 6570 5925 7 1420 1005 60 0 43 chr13 109469333 109469473 -10814839 + B1_Mus2 SINE Alu 14 147 0 7 1420 405 58 0 0 chr13 109469473 109469525 -10814787 + (A)n Simple_repeat Simple_repeat 1 52 0 7 1420 964 17 0 16 chr13 109469548 109469671 -10814641 - L1Md_F2 LINE L1 -773 5809 5689 7 1420 6119 45 0 0 chr13 109469671 109470405 -10813907 + L1Md_F2 LINE L1 5837 6570 -12 7 1420 435 297 133 49 chr13 109472179 109472487 -10811825 - Tigger7 DNA MER2_type 0 2491 2158 7 1420 225 292 50 30 chr13 109473571 109473670 -10810642 - MIR3 SINE MIR -5 203 103 7 1420 324 349 79 23 chr13 109474115 109474508 -10809804 - Lx9 LINE L1 -175 7469 7055 7 1420 728 221 0 0 chr13 109477343 109477479 -10806833 + B1_Mur1 SINE Alu 2 137 -12 7 1420 227 139 0 65 chr13 109477919 109477965 -10806347 + (TATAA)n Simple_repeat Simple_repeat 4 46 0 7 1420 22 0 0 0 chr13 109477967 109477989 -10806323 + AT_rich Low_complexity Low_complexity 1 22 0 7 1420 839 320 61 104 chr13 109478582 109479209 -10805103 + MER67B LTR ERV1 50 649 -12 7 1420 395 220 126 22 chr13 109480184 109480319 -10803993 - MLT1A1 LTR MaLR -1 407 259 7 1420 247 278 35 119 chr13 109480438 109480581 -10803731 - MLT1A1 LTR MaLR -223 142 12 7 1420 3164 8 0 0 chr13 109480853 109481218 -10803094 - MT2_Mm LTR ERVL -128 365 1 7 1420 302 0 0 0 chr13 109481218 109481256 -10803056 - MERVL-int LTR ERVL 0 5485 5448 7 1420 413 220 53 35 chr13 109481256 109481348 -10802964 - ORR1A3-int LTR MaLR -1323 640 547 7 1420 669 293 70 36 chr13 109481348 109481677 -10802635 + Charlie4a DNA MER1_type 4 343 -165 7 1420 589 296 103 20 chr13 109481702 109481954 -10802358 - Tigger9b DNA MER2_type 0 624 352 7 1420 378 348 8 0 chr13 109482134 109482252 -10802060 - Tigger9b DNA MER2_type -505 119 1 7 1420 441 0 0 0 chr13 109482283 109482332 -10801980 + (TC)n Simple_repeat Simple_repeat 2 50 0 7 1420 261 0 0 0 chr13 109482332 109482360 -10801952 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1420 1223 89 18 0 chr13 109482592 109482760 -10801552 - B2_Mm1t SINE B2 -22 171 1 7 1420 594 211 9 0 chr13 109483974 109484122 -10800190 - Lx6 LINE L1 -23 7437 7311 7 1420 1095 188 161 15 chr13 109484118 109484448 -10799864 + Lx7 LINE L1 5809 6186 -1510 7 1420 1044 163 0 0 chr13 109484448 109484614 -10799698 + ORR1A2 LTR MaLR 1 166 -161 7 1420 1056 104 12 6 chr13 109484605 109484769 -10799543 - ORR1A3-int LTR MaLR -1798 165 1 7 1420 1025 163 49 11 chr13 109484769 109485008 -10799304 - ORR1A3 LTR MaLR 0 329 63 7 1420 193 385 13 59 chr13 109485364 109485516 -10798796 - MIR3 SINE MIR -47 161 17 7 1420 414 57 0 0 chr13 109485868 109485921 -10798391 + (TCTG)n Simple_repeat Simple_repeat 2 54 0 7 1420 439 272 26 26 chr13 109485936 109486053 -10798259 - RSINE1 SINE B4 -47 118 2 7 1420 200 352 158 16 chr13 109486480 109486607 -10797705 - MIRb SINE MIR -58 210 66 7 1420 216 398 62 6 chr13 109486673 109486835 -10797477 - L2b LINE L2 -9 3366 3196 7 1420 272 286 107 50 chr13 109486950 109487090 -10797222 - L2a LINE L2 -2 3424 3277 7 1420 730 322 25 53 chr13 109487429 109487711 -10796601 + B4A SINE B4 5 278 -14 7 1420 203 383 77 38 chr13 109487792 109488262 -10796050 - L2b LINE L2 -672 2747 2260 7 1420 246 128 0 0 chr13 109489481 109489520 -10794792 + (T)n Simple_repeat Simple_repeat 1 39 0 7 1420 224 59 0 29 chr13 109490069 109490104 -10794208 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1420 968 309 59 11 chr13 109490246 109490518 -10793794 - B4A SINE B4 -2 290 6 7 1420 211 343 131 40 chr13 109490677 109490899 -10793413 - L3 LINE CR1 -347 4142 3901 7 1420 191 170 0 21 chr13 109491480 109491528 -10792784 + CT-rich Low_complexity Low_complexity 3 49 0 7 1420 387 0 0 0 chr13 109491545 109491588 -10792724 + (TG)n Simple_repeat Simple_repeat 2 44 0 7 1420 519 231 9 28 chr13 109491610 109491717 -10792595 - B4A SINE B4 -6 286 182 7 1420 24 0 0 0 chr13 109493819 109493843 -10790469 + AT_rich Low_complexity Low_complexity 1 24 0 7 1420 3538 151 38 2 chr13 109493844 109494428 -10789884 - Lx4A LINE L1 -2 7056 6452 7 1420 871 181 88 0 chr13 109494430 109494601 -10789711 + Lx4A LINE L1 6194 6379 -679 7 1420 22 35 0 0 chr13 109494632 109494661 -10789651 + AT_rich Low_complexity Low_complexity 1 29 0 7 1420 1099 338 28 22 chr13 109494757 109495293 -10789019 - Lx8 LINE L1 -146 7327 6789 7 1420 1313 84 26 5 chr13 109495304 109495495 -10788817 + B2_Mm2 SINE B2 1 195 0 7 1420 1464 316 34 39 chr13 109495508 109496177 -10788135 - Lx8 LINE L1 -699 6774 6109 7 1420 1147 237 29 40 chr13 109496369 109496720 -10787592 + Lx7 LINE L1 5445 5791 -89 7 1420 556 153 71 0 chr13 109496722 109496820 -10787492 + BC1_Mm scRNA scRNA 1 105 -47 7 1420 442 250 17 0 chr13 109496821 109496937 -10787375 + Lx7 LINE L1 5802 5919 -1777 7 1420 279 0 0 0 chr13 109498926 109498957 -10785355 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1420 617 307 3 12 chr13 109499261 109499439 -10784873 + MLT1A0 LTR MaLR 6 185 -223 7 1420 464 246 8 0 chr13 109499474 109499600 -10784712 - L1_Mur3 LINE L1 -1942 3938 3812 7 1420 1288 194 32 7 chr13 109499603 109499884 -10784428 - Lx5 LINE L1 -1060 5990 5703 7 1420 585 162 8 0 chr13 109499881 109499998 -10784314 + L1_Mur2 LINE L1 5243 5360 -517 7 1420 1498 157 22 4 chr13 109500002 109500271 -10784041 + L1_Mur2 LINE L1 5365 5638 -239 1 1420 467 279 178 44 chr13 109500272 109500452 -10783860 + MLT1A0 LTR MaLR 171 374 0 2 1420 327 272 109 0 chr13 109500609 109500701 -10783611 + MER20 DNA MER1_type 2 103 -116 3 1420 310 325 85 13 chr13 109500709 109501015 -10783297 + L1ME3 LINE L1 4776 5103 -1043 4 1420 243 292 119 28 chr13 109501149 109501367 -10782945 + L1ME3 LINE L1 5271 5508 -654 4 1420 470 361 101 21 chr13 109501387 109501774 -10782538 + L1ME3 LINE L1 5728 6145 -17 4 1420 725 138 19 19 chr13 109501798 109501953 -10782359 + GA-rich Low_complexity Low_complexity 6 160 0 5 1420 183 156 0 0 chr13 109502266 109502298 -10782014 + CT-rich Low_complexity Low_complexity 4 35 0 6 1420 246 32 0 0 chr13 109502806 109502837 -10781475 + (TTTG)n Simple_repeat Simple_repeat 3 33 0 7 1420 310 303 30 10 chr13 109502838 109502938 -10781374 - PB1D7 SINE Alu -7 113 12 8 1420 527 0 16 0 chr13 109503513 109503576 -10780736 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 9 1420 833 131 0 6 chr13 109503721 109503898 -10780414 + (TC)n Simple_repeat Simple_repeat 2 177 0 1 1420 699 128 0 32 chr13 109503901 109504015 -10780297 + (TCTG)n Simple_repeat Simple_repeat 2 112 0 1 1420 909 123 0 0 chr13 109504015 109504194 -10780118 + (TC)n Simple_repeat Simple_repeat 2 180 0 1 1420 699 128 0 32 chr13 109504194 109504264 -10780048 + (TCTG)n Simple_repeat Simple_repeat 2 69 0 1 1420 209 39 0 0 chr13 109504264 109504290 -10780022 + (TC)n Simple_repeat Simple_repeat 2 27 0 1 1420 637 321 27 5 chr13 109504300 109504488 -10779824 - B4A SINE B4 -92 200 9 1 1420 32 0 0 0 chr13 109504567 109504599 -10779713 + AT_rich Low_complexity Low_complexity 1 32 0 1 1420 14799 90 9 1 chr13 109505734 109508757 -10775555 - L1_Mus3 LINE L1 -6 6632 3583 1 1420 567 0 0 0 chr13 109509730 109509793 -10774519 + (TA)n Simple_repeat Simple_repeat 2 64 0 1 1420 4217 98 7 0 chr13 109510302 109510883 -10773429 + L1_Mus1 LINE L1 5983 6567 0 1 1420 279 0 0 0 chr13 109512387 109512418 -10771894 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1420 204 434 17 34 chr13 109512468 109512585 -10771727 - L2b LINE L2 -20 3355 3241 2 1420 205 304 0 42 chr13 109512804 109512852 -10771460 + L2a LINE L2 3356 3401 -25 2 1420 180 0 0 0 chr13 109513951 109513971 -10770341 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1420 476 326 149 17 chr13 109514685 109515035 -10769277 + Tigger13a DNA MER2_type 219 614 -157 2 1420 303 307 86 52 chr13 109516658 109516868 -10767444 + MLT1D LTR MaLR 1 217 -288 2 1420 241 231 65 21 chr13 109517267 109517453 -10766859 + L1MD LINE L1 3058 3251 -2895 2 1420 381 43 0 0 chr13 109517879 109517926 -10766386 + (TATG)n Simple_repeat Simple_repeat 2 48 0 2 1420 29488 80 9 1 chr13 109517926 109519483 -10764829 - L1_Mus1 LINE L1 -2 6565 4998 2 1420 6412 72 38 41 chr13 109519483 109520415 -10763897 - RLTR13B3 LTR ERVK 0 929 1 2 1420 29488 113 11 21 chr13 109520415 109524747 -10759565 - L1_Mus1 LINE L1 -886 4997 725 2 1420 339 279 42 14 chr13 109524749 109524891 -10759421 - L1_Mus1 LINE L1 -5807 809 664 2 1420 366 259 15 102 chr13 109524928 109525171 -10759141 - L1VL1 LINE L1 -6030 392 64 3 1420 724 293 61 4 chr13 109525401 109525665 -10758647 - MLT1B LTR MaLR -4 386 108 3 1420 238 364 76 8 chr13 109525729 109525848 -10758464 + L2a LINE L2 2913 3039 -387 3 1420 193 331 118 7 chr13 109525901 109526053 -10758259 + L2a LINE L2 3192 3360 -66 3 1420 809 257 56 52 chr13 109526741 109527028 -10757284 + B4 SINE B4 3 290 -2 3 1420 508 249 4 11 chr13 109527037 109527312 -10757000 + (CA)n Simple_repeat Simple_repeat 1 272 0 3 1420 1879 221 80 20 chr13 109527655 109528183 -10756129 - Lx2B LINE L1 0 7058 6411 3 1420 258 304 25 25 chr13 109528402 109528483 -10755829 + L2c LINE L2 3258 3338 -49 3 1420 247 342 44 18 chr13 109528485 109528598 -10755714 + MIRb SINE MIR 13 128 -140 3 1420 3853 99 18 19 chr13 109529094 109529890 -10754422 - Lx3C LINE L1 -780 6196 5405 3 1420 4631 115 59 11 chr13 109529890 109530636 -10753676 + Lx3C LINE L1 6190 6971 -5 3 1420 358 302 70 29 chr13 109530754 109530996 -10753316 - L1MA9 LINE L1 -263 6049 5798 3 1420 366 123 0 0 chr13 109531076 109531133 -10753179 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 4 1420 880 276 52 14 chr13 109531219 109531568 -10752744 - L1MA9 LINE L1 -590 5722 5361 3 1420 647 292 67 26 chr13 109531757 109532175 -10752137 - L1MA9 LINE L1 -846 5294 4860 3 1420 1204 188 126 8 chr13 109532180 109532443 -10751869 + ORR1B1 LTR MaLR 1 294 -100 4 1420 1424 53 5 5 chr13 109532450 109532638 -10751674 + L1Md_T LINE L1 6395 6582 0 4 1420 274 253 0 0 chr13 109532864 109532947 -10751365 - L1M3 LINE L1 -844 5296 5214 4 1420 450 282 48 26 chr13 109532929 109533158 -10751154 - L1M3 LINE L1 -1394 4746 4513 4 1420 356 0 23 0 chr13 109533171 109533215 -10751097 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 4 1420 390 134 0 0 chr13 109534090 109534157 -10750155 + (TCC)n Simple_repeat Simple_repeat 1 67 0 4 1420 655 271 47 50 chr13 109534714 109535120 -10749192 - L1M3 LINE L1 -1678 4462 4065 4 1420 203 254 0 56 chr13 109535213 109535284 -10749028 + A-rich Low_complexity Low_complexity 1 67 0 4 1420 744 308 75 43 chr13 109535301 109536178 -10748134 + L1MD LINE L1 2198 3102 -3044 4 1420 189 0 0 0 chr13 109536178 109536199 -10748113 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1420 340 292 85 0 chr13 109536294 109536424 -10747888 - B1F SINE Alu -8 141 1 4 1420 423 289 0 28 chr13 109536761 109536868 -10747444 - MER5B DNA MER1_type -1 177 74 5 1420 310 279 51 0 chr13 109536875 109536954 -10747358 + MER5A DNA MER1_type 8 90 -99 5 1420 502 271 70 6 chr13 109536998 109537154 -10747158 - MER5A1 DNA MER1_type 0 166 1 5 1420 198 167 0 0 chr13 109537378 109537414 -10746898 + (CA)n Simple_repeat Simple_repeat 1 36 0 5 1420 2442 299 99 38 chr13 109537748 109539568 -10744744 - Lx8 LINE L1 -75 7398 5446 5 1420 760 263 10 35 chr13 109539615 109539949 -10744363 + L1_Mur3 LINE L1 4461 4820 -1323 5 1420 576 0 0 0 chr13 109543133 109543197 -10741115 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 5 1420 574 131 0 16 chr13 109544839 109544963 -10739349 + (CA)n Simple_repeat Simple_repeat 2 123 0 5 1420 600 294 139 0 chr13 109546545 109546797 -10737515 + LTR53 LTR ERVL 187 473 -46 5 1420 227 250 0 0 chr13 109547644 109547700 -10736612 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 5 1420 201 171 0 0 chr13 109548634 109548669 -10735643 + T-rich Low_complexity Low_complexity 1 35 0 6 1420 308 300 129 15 chr13 109549583 109549715 -10734597 - MIRb SINE MIR -96 172 26 6 1420 1659 16 0 0 chr13 109550578 109550763 -10733549 - B2_Mm1a SINE B2 -7 186 2 6 1420 1020 79 35 7 chr13 109550982 109551123 -10733189 - B1_Mus1 SINE Alu 0 148 4 6 1420 2822 41 9 0 chr13 109551129 109551472 -10732840 - L1_Mus1 LINE L1 0 6567 6222 6 1420 231 377 64 29 chr13 109551820 109551992 -10732320 - L3b LINE CR1 -23 459 282 6 1420 21 36 0 0 chr13 109552104 109552132 -10732180 + AT_rich Low_complexity Low_complexity 1 28 0 6 1420 450 196 0 0 chr13 109552350 109552442 -10731870 + (TA)n Simple_repeat Simple_repeat 2 93 0 6 1420 22 0 0 0 chr13 109552628 109552650 -10731662 + AT_rich Low_complexity Low_complexity 1 22 0 6 1420 527 252 0 0 chr13 109552662 109552777 -10731535 + PB1D10 SINE Alu 2 116 -1 6 1420 290 125 0 35 chr13 109552784 109552842 -10731470 + GA-rich Low_complexity Low_complexity 3 58 0 7 1420 248 0 31 0 chr13 109553069 109553101 -10731211 + (CAA)n Simple_repeat Simple_repeat 1 33 0 7 1420 267 73 18 35 chr13 109553213 109553270 -10731042 + (TTG)n Simple_repeat Simple_repeat 2 57 0 7 1420 190 308 19 0 chr13 109553707 109553759 -10730553 + L3 LINE CR1 4302 4354 -135 7 1420 650 333 0 76 chr13 109554465 109554780 -10729532 + B4 SINE B4 2 292 0 7 1420 237 218 0 54 chr13 109555074 109555151 -10729161 + (TTTA)n Simple_repeat Simple_repeat 3 77 0 7 1420 792 239 0 37 chr13 109555151 109555342 -10728970 - B3A SINE B2 -14 184 1 7 1420 237 218 0 54 chr13 109555342 109555356 -10728956 + (TTTA)n Simple_repeat Simple_repeat 3 14 0 7 1420 455 330 20 42 chr13 109555361 109555579 -10728733 - B3A SINE B2 -12 204 1 7 1420 231 255 88 78 chr13 109555606 109555708 -10728604 - PB1D9 SINE Alu -13 107 5 7 1420 507 56 0 0 chr13 109555962 109556033 -10728279 + (CA)n Simple_repeat Simple_repeat 2 72 0 8 1420 486 0 0 0 chr13 109556034 109556088 -10728224 + (GA)n Simple_repeat Simple_repeat 1 54 0 8 1420 809 247 20 5 chr13 109557053 109557252 -10727060 - B3 SINE B2 -14 202 1 8 1420 4078 83 18 15 chr13 109557281 109557891 -10726421 - Lx3_Mus LINE L1 -609 6400 5789 8 1420 4209 102 5 13 chr13 109557904 109558530 -10725782 + Lx3_Mus LINE L1 6384 7004 -5 8 1420 225 275 11 11 chr13 109558821 109558913 -10725399 - L1MA9 LINE L1 -24 6288 6197 8 1420 261 0 0 0 chr13 109559170 109559199 -10725113 + (TG)n Simple_repeat Simple_repeat 2 30 0 8 1420 29 0 0 0 chr13 109559500 109559529 -10724783 + AT_rich Low_complexity Low_complexity 1 29 0 8 1420 295 393 0 22 chr13 109560293 109560431 -10723881 - MIRb SINE MIR -13 255 121 8 1420 27 49 0 0 chr13 109560436 109560477 -10723835 + AT_rich Low_complexity Low_complexity 1 41 0 8 1420 902 266 31 12 chr13 109560512 109560767 -10723545 - MER2 DNA MER2_type 0 345 86 8 1420 2155 37 48 0 chr13 109561172 109561440 -10722872 - L1Md_A LINE L1 0 6582 6302 9 1420 449 226 236 16 chr13 109561700 109561940 -10722372 + Lx6 LINE L1 7166 7459 -1 9 1420 303 122 0 0 chr13 109563313 109563362 -10720950 + (CATA)n Simple_repeat Simple_repeat 2 50 0 9 1420 298 233 0 10 chr13 109563565 109563635 -10720677 - PB1D9 SINE Alu -82 67 1 9 1420 266 290 0 0 chr13 109563582 109563644 -10720668 - B4A SINE B4 -154 138 77 9 1420 543 337 27 38 chr13 109566040 109566333 -10717979 + L2a LINE L2 2944 3233 -193 9 1420 27 62 0 0 chr13 109566445 109566493 -10717819 + AT_rich Low_complexity Low_complexity 1 48 0 9 1420 1591 24 44 0 chr13 109566932 109567138 -10717174 + L1_Mus3 LINE L1 5587 5801 -837 9 1420 384 228 8 16 chr13 109567447 109567572 -10716740 + Lx4B LINE L1 6927 7050 -8 9 1420 227 299 23 11 chr13 109567921 109568009 -10716303 + L1MEd LINE L1 626 714 -5405 9 1420 550 326 14 68 chr13 109569048 109569344 -10714968 + B4A SINE B4 1 280 -12 1 1420 420 306 74 88 chr13 109569837 109570044 -10714268 + B3A SINE B2 1 216 0 1 1420 588 346 78 36 chr13 109570335 109570746 -10713566 + L1M5 LINE L1 5336 5763 -477 1 1420 239 244 75 32 chr13 109570747 109570840 -10713472 + Lx4B LINE L1 6957 7053 -5 1 1420 233 270 27 0 chr13 109571282 109571356 -10712956 - L1MD2 LINE L1 -63 6296 6221 1 1420 730 311 49 8 chr13 109572011 109572075 -10712237 - MLT1D LTR MaLR -3 502 437 1 1420 4377 43 2 9 chr13 109572075 109572611 -10711701 - L1_Mus1 LINE L1 0 6567 6036 1 1420 730 311 49 8 chr13 109572611 109572789 -10711523 - MLT1D LTR MaLR -69 436 252 1 1420 413 328 57 0 chr13 109572967 109573089 -10711223 - B1F1 SINE Alu 0 149 21 1 1420 1130 82 0 7 chr13 109573679 109573827 -10710485 - B1_Mm SINE Alu 0 147 1 1 1420 596 238 0 0 chr13 109574049 109574171 -10710141 + B1F SINE Alu 18 139 -10 1 1420 2137 93 19 3 chr13 109574219 109574531 -10709781 - L1_Mus4 LINE L1 -1 6635 6319 1 1420 5117 68 6 0 chr13 109574545 109575234 -10709078 + L1_Mus4 LINE L1 5587 6279 -357 1 1420 401 295 0 54 chr13 109575234 109575345 -10708967 - PB1D7 SINE Alu -34 115 11 1 1420 25 31 0 0 chr13 109575423 109575455 -10708857 + AT_rich Low_complexity Low_complexity 1 32 0 1 1420 627 199 55 34 chr13 109575583 109575729 -10708583 + B1_Mur2 SINE Alu 1 149 0 1 1421 370 324 78 0 chr13 109576799 109577043 -10707269 + L1MD3 LINE L1 7728 7990 -5 1 1421 1710 325 132 37 chr13 109577423 109578798 -10705514 + L1M4b LINE L1 89 1546 -5788 1 1421 1380 69 59 0 chr13 109578798 109579000 -10705312 - L1_Mus2 LINE L1 0 6566 6353 1 1421 1710 325 132 37 chr13 109579000 109579473 -10704839 + L1M4b LINE L1 1547 2112 -5222 1 1421 299 212 58 50 chr13 109579585 109579724 -10704588 + L1M4b LINE L1 2292 2431 -4903 1 1421 568 253 49 12 chr13 109579729 109579973 -10704339 + L1M4b LINE L1 4216 4468 -2538 1 1421 356 286 54 116 chr13 109579991 109580232 -10704080 + L1M4b LINE L1 6397 6622 -422 1 1421 36288 30 0 0 chr13 109580307 109586734 -10697578 - L1Md_T LINE L1 0 6585 60 1 1421 2300 159 9 37 chr13 109586752 109587208 -10697104 + Lx9 LINE L1 7196 7638 -6 1 1421 252 277 156 15 chr13 109587517 109587722 -10696590 + MIR SINE MIR 13 246 -16 1 1421 622 53 25 51 chr13 109587805 109587923 -10696389 + (TTTCC)n Simple_repeat Simple_repeat 5 119 0 1 1421 1149 112 55 16 chr13 109587923 109588105 -10696207 - B2_Mm2 SINE B2 0 195 7 1 1421 5825 68 3 1 chr13 109588150 109588896 -10695416 - L1Md_F2 LINE L1 -19 6563 5817 1 1421 34 24 0 0 chr13 109588897 109588938 -10695374 + AT_rich Low_complexity Low_complexity 1 41 0 1 1421 454 263 118 22 chr13 109589650 109589786 -10694526 + B1F SINE Alu 1 149 0 1 1421 852 63 0 0 chr13 109589793 109589904 -10694408 + (GA)n Simple_repeat Simple_repeat 2 112 0 1 1421 264 30 0 0 chr13 109590090 109590123 -10694189 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1421 250 250 0 0 chr13 109590231 109590299 -10694013 + (TATATG)n Simple_repeat Simple_repeat 1 68 0 1 1421 2050 311 27 29 chr13 109590946 109591768 -10692544 - Lx9 LINE L1 -443 7201 6382 1 1421 30 45 0 0 chr13 109591824 109591868 -10692444 + AT_rich Low_complexity Low_complexity 1 44 0 1 1421 214 94 0 167 chr13 109592044 109592236 -10692076 + (CAGAGA)n Simple_repeat Simple_repeat 2 161 0 1 1421 189 0 0 0 chr13 109592735 109592756 -10691556 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1421 478 329 14 0 chr13 109592814 109592954 -10691358 - RSINE1 SINE B4 -19 146 5 1 1421 860 156 14 0 chr13 109593425 109593566 -10690746 + URR1B DNA MER1_type 83 225 0 1 1421 2894 231 72 28 chr13 109594488 109595277 -10689035 - Lx6 LINE L1 -1 7459 6636 1 1421 913 211 37 54 chr13 109595271 109595512 -10688800 - Lx6 LINE L1 -7194 534 298 1 1421 280 234 117 36 chr13 109596907 109597018 -10687294 - MLT1H2 LTR MaLR -367 122 3 1 1421 285 239 1 29 chr13 109597877 109597946 -10686366 - MLT1B LTR MaLR -68 322 246 1 1421 36 0 0 0 chr13 109598743 109598779 -10685533 + AT_rich Low_complexity Low_complexity 1 36 0 1 1421 266 319 0 0 chr13 109599095 109599164 -10685148 + (CATG)n Simple_repeat Simple_repeat 1 69 0 1 1421 289 338 14 42 chr13 109599888 109599904 -10684408 + ID_B1 SINE B4 65 147 -77 1 1421 423 291 17 8 chr13 109599904 109600022 -10684290 + B1F SINE Alu 1 119 -30 1 1421 360 0 0 0 chr13 109600583 109600623 -10683689 + (TG)n Simple_repeat Simple_repeat 2 41 0 1 1421 462 329 56 89 chr13 109600650 109600920 -10683392 - B4 SINE B4 -31 261 1 1 1421 285 29 0 0 chr13 109601061 109601095 -10683217 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 1 1421 395 378 63 22 chr13 109601254 109601522 -10682790 + MLT1H1 LTR MaLR 162 440 -115 1 1421 755 180 22 0 chr13 109601635 109601774 -10682538 - URR1B DNA MER1_type -1 224 83 1 1421 503 252 15 15 chr13 109602351 109602488 -10681824 + MTD LTR MaLR 18 154 -265 1 1421 594 200 48 61 chr13 109602489 109602654 -10681658 + MTD LTR MaLR 257 419 0 1 1421 924 213 23 28 chr13 109603213 109603430 -10680882 - B3 SINE B2 0 216 1 1 1421 237 337 30 30 chr13 109603432 109603533 -10680779 + LTR16C LTR ERVL 179 279 -210 1 1421 393 278 176 11 chr13 109603575 109603757 -10680555 + Charlie10b DNA MER1_type 21 232 -10 1 1421 204 313 24 24 chr13 109604682 109604767 -10679545 + MIR3 SINE MIR 112 196 -12 1 1421 214 171 0 0 chr13 109604842 109604883 -10679429 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1 1421 359 275 55 76 chr13 109605617 109605853 -10678459 - L1ME3 LINE L1 -31 6131 5901 1 1421 225 0 0 0 chr13 109605914 109605939 -10678373 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1421 233 184 37 74 chr13 109605948 109606083 -10678229 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 1 1421 238 299 117 9 chr13 109606205 109606428 -10677884 - L1ME3 LINE L1 -529 5644 5391 1 1421 501 17 0 0 chr13 109606681 109606739 -10677573 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 1 1421 225 329 46 59 chr13 109606856 109607008 -10677304 - L1M4c LINE L1 -6219 165 16 1 1421 3705 53 11 0 chr13 109608344 109608813 -10675499 - L1Md_F2 LINE L1 0 6582 6109 1 1421 2539 154 12 5 chr13 109608813 109609217 -10675095 + MTC LTR MaLR 3 409 -12 1 1421 180 0 0 0 chr13 109609217 109609237 -10675075 + (CTAA)n Simple_repeat Simple_repeat 1 20 0 1 1421 257 384 37 51 chr13 109610771 109610985 -10673327 - MLT1K LTR MaLR -279 316 106 1 1421 311 127 16 0 chr13 109611821 109611884 -10672428 + (TA)n Simple_repeat Simple_repeat 1 64 0 1 1421 541 282 49 14 chr13 109612366 109612536 -10671776 - ID_B1 SINE B4 -41 251 70 1 1421 497 195 57 74 chr13 109613346 109613468 -10670844 + B3 SINE B2 92 211 -5 1 1421 23 54 0 0 chr13 109613612 109613649 -10670663 + AT_rich Low_complexity Low_complexity 1 37 0 1 1421 1544 37 5 16 chr13 109614346 109614538 -10669774 + B2_Mm1t SINE B2 1 190 -3 1 1421 877 306 76 22 chr13 109615615 109615687 -10668625 + MTEa LTR MaLR 1 73 -306 1 1421 399 83 0 0 chr13 109615687 109615747 -10668565 + (TG)n Simple_repeat Simple_repeat 1 60 0 1 1421 877 306 76 22 chr13 109615747 109616029 -10668283 + MTEa LTR MaLR 74 374 -5 1 1421 1212 294 24 16 chr13 109616035 109616408 -10667904 + MTEa-int LTR MaLR 2 377 -1203 1 1421 8020 30 0 0 chr13 109616424 109617659 -10666653 - L1Md_A LINE L1 0 6582 5348 1 1421 2692 223 59 18 chr13 109618188 109618869 -10665443 - RMER1C Other Other 0 1342 634 1 1421 414 0 0 0 chr13 109618986 109619032 -10665280 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1421 688 304 45 23 chr13 109619033 109619299 -10665013 - B4A SINE B4 -16 276 5 1 1421 273 57 0 0 chr13 109619561 109619596 -10664716 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1421 29 70 0 0 chr13 109619661 109619718 -10664594 + AT_rich Low_complexity Low_complexity 1 57 0 1 1421 8564 188 42 91 chr13 109620090 109623259 -10661053 - Lx5 LINE L1 -57 6993 3993 1 1421 950 316 7 0 chr13 109623384 109623656 -10660656 + B4A SINE B4 1 274 -18 1 1421 238 279 29 0 chr13 109624983 109625051 -10659261 - MIR SINE MIR -186 76 7 1 1421 269 232 37 0 chr13 109625870 109625952 -10658360 - L1MA10 LINE L1 -4 6330 6246 1 1421 258 32 0 0 chr13 109626182 109626213 -10658099 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1421 216 333 38 62 chr13 109626213 109626293 -10658019 - ID4 SINE ID -5 78 1 1 1421 389 333 30 0 chr13 109626299 109626434 -10657878 - B1F SINE Alu -8 141 3 1 1421 316 302 158 0 chr13 109626705 109626920 -10657392 - L1M5 LINE L1 -495 5629 5381 1 1421 892 140 14 29 chr13 109627122 109627262 -10657050 + B1_Mur4 SINE Alu 2 139 -11 1 1421 703 268 18 60 chr13 109627313 109627531 -10656781 - B3 SINE B2 -7 209 1 1 1421 2496 170 57 2 chr13 109627555 109628032 -10656280 - L1_Mur1 LINE L1 -68 5818 5316 1 1421 288 0 0 0 chr13 109628041 109628073 -10656239 + (A)n Simple_repeat Simple_repeat 1 32 0 1 1421 2388 212 73 14 chr13 109628073 109628660 -10655652 + Lx2B LINE L1 6369 6990 -10 1 1421 450 0 0 0 chr13 109628898 109628948 -10655364 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1421 198 0 0 0 chr13 109628948 109628969 -10655343 + (CA)n Simple_repeat Simple_repeat 1 22 0 1 1421 350 172 0 0 chr13 109629871 109629935 -10654377 - HAL1-3A_ME LINE L1 -820 2038 1975 1 1421 210 219 0 0 chr13 109629935 109629999 -10654313 + (TG)n Simple_repeat Simple_repeat 1 64 0 1 1421 231 61 0 0 chr13 109630534 109630567 -10653745 + (TA)n Simple_repeat Simple_repeat 2 34 0 1 1421 245 284 70 47 chr13 109631144 109631273 -10653039 + MIR SINE MIR 110 241 -21 1 1421 1203 48 0 7 chr13 109631694 109631842 -10652470 - B1_Mus1 SINE Alu 0 148 2 1 1421 180 97 0 0 chr13 109631885 109631916 -10652396 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1421 207 69 0 0 chr13 109632043 109632072 -10652240 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1421 12974 9 1 0 chr13 109632899 109634438 -10649874 + L1Md_T LINE L1 4046 5585 -298 1 1421 8400 32 1 1 chr13 109634439 109635432 -10648880 + L1Md_T LINE L1 5587 6579 -3 1 1421 563 80 0 0 chr13 109636140 109636228 -10648084 + L1_Mus3 LINE L1 6549 6636 -2 1 1421 786 22 0 0 chr13 109637188 109637280 -10647032 + (TC)n Simple_repeat Simple_repeat 1 92 0 1 1421 249 273 81 106 chr13 109638637 109638760 -10645552 + L2b LINE L2 3264 3383 -4 1 1421 407 363 0 34 chr13 109639318 109639435 -10644877 + RSINE1 SINE B4 2 114 -51 2 1421 270 56 0 0 chr13 109639438 109639474 -10644838 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1421 690 13 0 0 chr13 109639474 109639552 -10644760 + (GA)n Simple_repeat Simple_repeat 2 80 0 2 1421 247 250 26 26 chr13 109639958 109640036 -10644276 + GA-rich Low_complexity Low_complexity 5 82 0 2 1421 215 294 75 38 chr13 109640036 109640142 -10644170 - L2 LINE L2 -1691 1728 1619 2 1421 898 245 21 5 chr13 109640239 109640432 -10643880 - B3 SINE B2 -20 196 1 2 1421 1684 280 9 34 chr13 109640665 109641191 -10643121 - Lx6 LINE L1 -40 7420 6908 2 1421 440 172 9 0 chr13 109641198 109641314 -10642998 + CT-rich Low_complexity Low_complexity 2 118 0 2 1421 519 184 10 0 chr13 109641315 109641413 -10642899 - Lx6 LINE L1 -568 6892 6794 2 1421 367 254 121 14 chr13 109642787 109642927 -10641385 - HAL1-3A_ME LINE L1 -728 2130 1976 2 1421 1281 83 0 0 chr13 109642934 109643114 -10641198 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1421 318 296 222 54 chr13 109643211 109643490 -10640822 - L1ME4a LINE L1 -241 5883 5558 2 1421 23 33 0 0 chr13 109643525 109643555 -10640757 + AT_rich Low_complexity Low_complexity 1 30 0 2 1421 26 30 0 0 chr13 109643670 109643703 -10640609 + AT_rich Low_complexity Low_complexity 1 33 0 2 1421 1161 164 23 5 chr13 109643744 109643965 -10640347 - URR1B DNA MER1_type 0 225 1 2 1421 700 194 247 11 chr13 109645555 109645737 -10638575 - URR1B DNA MER1_type 0 225 1 2 1421 319 287 38 69 chr13 109646050 109646181 -10638131 - MIRc SINE MIR -59 209 83 2 1421 456 19 0 0 chr13 109646600 109646653 -10637659 + (TA)n Simple_repeat Simple_repeat 2 54 0 2 1421 250 371 65 53 chr13 109646978 109647319 -10636993 + LTR33 LTR ERVL 1 345 -170 2 1421 213 36 0 0 chr13 109648820 109648831 -10635481 + (GTTTG)n Simple_repeat Simple_repeat 4 14 0 2 1421 282 29 0 0 chr13 109648831 109648866 -10635446 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2 1421 213 36 0 0 chr13 109648866 109648882 -10635430 + (GTTTG)n Simple_repeat Simple_repeat 3 18 0 2 1421 881 221 68 2 chr13 109648916 109649215 -10635097 - Lx3C LINE L1 0 7058 6650 2 1421 333 0 0 0 chr13 109651324 109651361 -10632951 + (A)n Simple_repeat Simple_repeat 1 37 0 2 1421 894 338 67 6 chr13 109652438 109652783 -10631529 - MTEa LTR MaLR -13 366 1 2 1421 329 266 119 99 chr13 109652990 109653294 -10631018 - MLT1A LTR MaLR -13 361 11 2 1421 278 214 0 56 chr13 109653344 109653433 -10630879 - Lx4A LINE L1 -2 7056 6973 2 1421 266 102 61 0 chr13 109653879 109653928 -10630384 + GA-rich Low_complexity Low_complexity 4 55 0 2 1421 231 125 0 0 chr13 109654553 109654593 -10629719 + (T)n Simple_repeat Simple_repeat 1 40 0 2 1421 25 0 0 0 chr13 109655245 109655270 -10629042 + AT_rich Low_complexity Low_complexity 1 25 0 2 1421 205 322 21 72 chr13 109655383 109655480 -10628832 - L2c LINE L2 -8 3379 3288 2 1421 212 175 0 0 chr13 109656563 109656603 -10627709 + A-rich Low_complexity Low_complexity 1 40 0 2 1421 366 162 138 0 chr13 109657902 109657982 -10626330 + RSINE1 SINE B4 12 102 -63 2 1421 507 123 0 0 chr13 109658006 109658087 -10626225 + (CA)n Simple_repeat Simple_repeat 2 82 0 2 1421 3090 43 3 0 chr13 109659563 109659934 -10624378 - L1_Mus1 LINE L1 -2 6565 6194 2 1421 4003 72 0 0 chr13 109661063 109661605 -10622707 - L1_Mus2 LINE L1 -413 6154 5613 2 1421 3583 53 0 0 chr13 109661605 109662039 -10622273 + L1_Mus2 LINE L1 6133 6566 0 2 1421 256 257 54 0 chr13 109662071 109662227 -10622085 + L1M4b LINE L1 1687 1851 -5342 2 1421 209 281 18 0 chr13 109662228 109662285 -10622027 + GA-rich Low_complexity Low_complexity 1 58 0 2 1421 191 42 19 77 chr13 109662342 109662394 -10621918 + (TATAA)n Simple_repeat Simple_repeat 1 49 0 2 1421 247 255 20 0 chr13 109662395 109662493 -10621819 + L1M4b LINE L1 2036 2135 -4967 2 1421 345 47 0 0 chr13 109662513 109662556 -10621756 + (GA)n Simple_repeat Simple_repeat 1 43 0 2 1421 247 290 0 36 chr13 109662602 109662713 -10621599 + L1M4b LINE L1 2141 2247 -4840 2 1421 551 336 50 5 chr13 109663613 109663834 -10620478 + Tigger7 DNA MER2_type 53 283 -2208 2 1421 533 229 187 19 chr13 109663893 109664102 -10620210 + Tigger7 DNA MER2_type 2201 2444 -47 2 1421 621 293 47 12 chr13 109664123 109664292 -10620020 - Tigger7 DNA MER2_type -2294 197 23 2 1421 2128 162 62 8 chr13 109664491 109664865 -10619447 + ORR1B1 LTR MaLR 1 394 0 2 1421 22 35 0 0 chr13 109665043 109665072 -10619240 + AT_rich Low_complexity Low_complexity 1 29 0 2 1421 221 130 0 42 chr13 109665915 109665963 -10618349 + (TCTCTG)n Simple_repeat Simple_repeat 1 46 0 2 1421 450 0 0 0 chr13 109666557 109666607 -10617705 + (TG)n Simple_repeat Simple_repeat 2 51 0 2 1421 196 344 0 15 chr13 109666645 109666710 -10617602 - MIRc SINE MIR -37 231 168 2 1421 1238 20 0 0 chr13 109668223 109668370 -10615942 - B1_Mus2 SINE Alu 0 147 1 2 1421 204 40 0 0 chr13 109669495 109669520 -10614792 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2 1421 237 346 62 31 chr13 109670779 109670940 -10613372 - MER5A DNA MER1_type -23 166 1 2 1421 780 88 33 26 chr13 109670967 109671118 -10613194 + L1_Mus3 LINE L1 6487 6638 0 2 1421 297 0 0 0 chr13 109671127 109671160 -10613152 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 2 1421 298 239 28 0 chr13 109671612 109671683 -10612629 + ID4 SINE ID 2 74 -9 2 1421 1088 128 0 6 chr13 109672484 109672589 -10611723 + (TTC)n Simple_repeat Simple_repeat 3 107 0 2 1421 1313 67 0 11 chr13 109672589 109672771 -10611541 + (TCC)n Simple_repeat Simple_repeat 1 180 0 2 1421 1088 128 0 6 chr13 109672771 109672845 -10611467 + (TTC)n Simple_repeat Simple_repeat 1 74 0 2 1421 22 56 0 0 chr13 109674089 109674125 -10610187 + AT_rich Low_complexity Low_complexity 1 36 0 2 1421 759 315 44 68 chr13 109674291 109674346 -10609966 + B4 SINE B4 30 84 -208 2 1421 192 77 0 0 chr13 109674346 109674372 -10609940 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2 1421 759 315 44 68 chr13 109674372 109674565 -10609747 + B4 SINE B4 85 272 -20 2 1421 221 186 16 48 chr13 109674860 109674922 -10609390 + (TTTAG)n Simple_repeat Simple_repeat 3 62 0 2 1421 222 150 0 0 chr13 109675419 109675459 -10608853 + (CATA)n Simple_repeat Simple_repeat 1 40 0 2 1421 338 319 0 31 chr13 109676234 109676331 -10607981 + PB1D10 SINE Alu 23 116 -1 2 1421 365 290 114 40 chr13 109676594 109676990 -10607322 + L1ME3A LINE L1 5529 5950 -223 2 1421 464 187 44 22 chr13 109677167 109677304 -10607008 - Lx7 LINE L1 -1866 5830 5691 2 1421 666 286 188 13 chr13 109677313 109677611 -10606701 - MTC LTR MaLR -52 369 20 2 1421 912 139 6 11 chr13 109677617 109677791 -10606521 + GA-rich Low_complexity Low_complexity 2 174 0 2 1421 13473 93 22 12 chr13 109677791 109680611 -10603701 - L1VL4 LINE L1 -724 2835 1 2 1421 27 29 0 0 chr13 109680725 109680759 -10603553 + AT_rich Low_complexity Low_complexity 1 34 0 2 1421 584 346 21 39 chr13 109680870 109680953 -10603359 + B4A SINE B4 5 76 -216 2 1421 432 0 0 0 chr13 109680953 109681001 -10603311 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1421 584 346 21 39 chr13 109681001 109681197 -10603115 + B4A SINE B4 77 278 -14 2 1421 369 318 27 7 chr13 109681285 109681434 -10602878 - L1MB1 LINE L1 -52 6116 5965 2 1421 351 44 0 0 chr13 109681440 109681485 -10602827 + (TC)n Simple_repeat Simple_repeat 2 46 0 2 1421 4738 151 73 2 chr13 109681487 109682291 -10602021 - Lx4A LINE L1 -2 7056 6196 2 1421 292 180 16 16 chr13 109682291 109682353 -10601959 + RLTR22_Mur LTR ERVK 1 62 -1786 2 1421 2108 108 10 0 chr13 109682353 109682667 -10601645 - L1_Mur2 LINE L1 -447 5430 5114 2 1421 7086 119 70 32 chr13 109682659 109683185 -10601127 - L1_Mur2 LINE L1 -3300 2577 2061 2 1421 534 43 0 0 chr13 109683185 109683254 -10601058 + (TG)n Simple_repeat Simple_repeat 1 69 0 2 1421 7086 145 85 20 chr13 109683254 109684502 -10599810 - L1_Mur2 LINE L1 -3817 2060 646 2 1421 881 66 8 0 chr13 109684502 109684623 -10599689 + (GGGAA)n Simple_repeat Simple_repeat 1 122 0 2 1421 2794 189 113 0 chr13 109684623 109684700 -10599612 - L1_Mur2 LINE L1 -6441 645 567 2 1421 737 253 51 70 chr13 109684698 109685029 -10599283 - L1M2 LINE L1 -652 5660 5336 2 1421 424 257 29 29 chr13 109685029 109685133 -10599179 + B3A SINE B2 2 105 -93 2 1421 548 292 56 0 chr13 109685447 109685608 -10598704 + RCHARR1 DNA MER1_type 1 170 -804 2 1421 360 310 66 55 chr13 109685665 109685846 -10598466 + RCHARR1 DNA MER1_type 255 437 -537 2 1421 1011 316 4 11 chr13 109685962 109686234 -10598078 - B4A SINE B4 -10 282 13 2 1421 262 232 129 20 chr13 109686228 109686329 -10597983 + RCHARR1 DNA MER1_type 723 834 -140 2 1421 466 211 139 8 chr13 109686364 109686493 -10597819 + RCHARR1 DNA MER1_type 59 204 -770 2 1421 543 16 0 0 chr13 109686525 109686589 -10597723 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 2 1421 1343 260 39 6 chr13 109686598 109686935 -10597377 + Lx9 LINE L1 6465 6812 -832 2 1421 2727 311 91 6 chr13 109686936 109687941 -10596371 - Lx8 LINE L1 -179 7294 6205 2 1421 452 309 71 6 chr13 109688003 109688172 -10596140 - B3A SINE B2 -18 180 1 2 1421 259 275 149 22 chr13 109689539 109689673 -10594639 + MTD LTR MaLR 255 405 -14 2 1421 252 77 0 0 chr13 109690051 109690090 -10594222 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2 1421 298 276 89 7 chr13 109690670 109690805 -10593507 - L1MA9 LINE L1 -15 6297 6152 2 1421 7776 49 23 0 chr13 109691039 109692093 -10592219 - L1Md_F2 LINE L1 0 6582 5505 2 1421 12084 71 0 36 chr13 109692087 109693779 -10590533 + L1Md_F2 LINE L1 3922 5552 -331 2 1421 818 309 100 46 chr13 109693773 109694529 -10589783 - L1MA9 LINE L1 -403 5909 5107 2 1421 503 31 0 15 chr13 109694832 109694898 -10589414 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 1421 294 285 119 24 chr13 109697103 109697177 -10587135 + MER5B DNA MER1_type 21 103 -75 2 1421 423 0 0 0 chr13 109697177 109697224 -10587088 + (TG)n Simple_repeat Simple_repeat 1 47 0 2 1421 294 285 119 24 chr13 109697224 109697275 -10587037 + MER5B DNA MER1_type 104 158 -20 2 1421 306 194 0 0 chr13 109697856 109697923 -10586389 + (TTTA)n Simple_repeat Simple_repeat 4 70 0 2 1421 25 0 0 0 chr13 109698342 109698367 -10585945 + AT_rich Low_complexity Low_complexity 1 25 0 2 1421 30 0 0 0 chr13 109698490 109698520 -10585792 + AT_rich Low_complexity Low_complexity 1 30 0 2 1421 2280 319 48 54 chr13 109698609 109698834 -10585478 - Lx9 LINE L1 -285 7359 7148 2 1421 222 118 0 0 chr13 109698834 109698868 -10585444 + (TA)n Simple_repeat Simple_repeat 1 34 0 2 1421 5134 63 26 1 chr13 109698869 109699553 -10584759 - L1_Mus3 LINE L1 -14 6624 5924 2 1421 2280 319 48 54 chr13 109699553 109700374 -10583938 - Lx9 LINE L1 -497 7147 6318 2 1421 1104 68 0 0 chr13 109700588 109700751 -10583561 + (TC)n Simple_repeat Simple_repeat 2 164 0 2 1421 183 328 17 0 chr13 109700824 109700882 -10583430 + L2a LINE L2 3351 3409 -17 2 1421 313 235 114 65 chr13 109701289 109701412 -10582900 - HAL1-3A_ME LINE L1 -481 2377 2249 2 1421 1097 96 7 13 chr13 109701450 109701610 -10582702 + B2_Mm2 SINE B2 1 160 -33 3 1421 342 0 0 0 chr13 109701610 109701648 -10582664 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 3 1421 1043 119 84 11 chr13 109701648 109701666 -10582646 + B2_Mm1t SINE B2 161 191 -2 3 1421 363 168 64 27 chr13 109702535 109702645 -10581667 - Lx9 LINE L1 -2 7642 7529 3 1421 378 0 0 0 chr13 109702652 109702694 -10581618 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1421 611 258 140 0 chr13 109703480 109703666 -10580646 + B3 SINE B2 1 212 -4 3 1421 574 281 20 11 chr13 109703676 109703853 -10580459 + Lx9 LINE L1 6170 6492 -1152 3 1421 312 351 192 21 chr13 109704431 109704859 -10579453 - MLT1H LTR MaLR 0 549 49 3 1421 1333 191 45 19 chr13 109705470 109705779 -10578533 + Lx9 LINE L1 7208 7524 -120 3 1421 521 184 29 41 chr13 109705816 109705986 -10578326 + Lx9 LINE L1 7477 7644 0 3 1421 1781 275 167 20 chr13 109706496 109707184 -10577128 - RCHARR1 DNA MER1_type 0 974 186 3 1422 461 226 40 73 chr13 109707318 109707442 -10576870 + B3A SINE B2 2 121 -77 3 1422 432 0 0 0 chr13 109707454 109707502 -10576810 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1422 2963 25 5 67 chr13 109707535 109707924 -10576388 - RLTR10B2 LTR ERVK 0 365 1 3 1422 183 100 0 0 chr13 109708264 109708294 -10576018 + (T)n Simple_repeat Simple_repeat 1 30 0 3 1422 235 309 53 0 chr13 109708903 109708997 -10575315 - MLT1J1 LTR MaLR -4 440 342 3 1422 21 0 0 0 chr13 109709295 109709316 -10574996 + AT_rich Low_complexity Low_complexity 1 21 0 3 1422 405 0 0 0 chr13 109709605 109709650 -10574662 + (TAA)n Simple_repeat Simple_repeat 3 47 0 3 1422 238 86 29 0 chr13 109709650 109709685 -10574627 + (CCCCCT)n Simple_repeat Simple_repeat 2 37 0 3 1422 681 173 19 0 chr13 109709686 109709842 -10574470 + CT-rich Low_complexity Low_complexity 3 161 0 3 1422 930 205 317 12 chr13 109710012 109710334 -10573978 + MTC LTR MaLR 2 421 0 3 1422 1937 194 15 40 chr13 109710335 109710737 -10573575 + MTC-int LTR MaLR 2 393 -865 3 1422 2421 251 142 7 chr13 109710737 109711415 -10572897 + RMER1C Other Other 568 1336 -6 3 1422 2748 169 19 12 chr13 109711415 109711947 -10572365 + MTC-int LTR MaLR 377 883 -215 3 1422 492 32 0 0 chr13 109711948 109712010 -10572302 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1422 22 0 0 0 chr13 109712066 109712088 -10572224 + AT_rich Low_complexity Low_complexity 1 22 0 3 1422 1530 71 14 0 chr13 109712088 109712300 -10572012 - L1_Mus1 LINE L1 0 6567 6353 3 1422 2103 83 3 14 chr13 109712300 109712594 -10571718 + L1_Mm LINE L1 4760 5050 -833 3 1422 546 182 159 14 chr13 109712662 109712807 -10571505 + MTC-int LTR MaLR 1093 1258 0 3 1422 848 225 251 0 chr13 109712807 109713034 -10571278 + MTC LTR MaLR 1 284 -137 3 1422 667 221 0 22 chr13 109715467 109715601 -10568711 + B1_Mur2 SINE Alu 1 131 -18 3 1422 221 232 14 0 chr13 109715647 109715716 -10568596 + GA-rich Low_complexity Low_complexity 5 74 0 3 1422 22 0 0 0 chr13 109716132 109716154 -10568158 + AT_rich Low_complexity Low_complexity 1 22 0 3 1422 793 83 61 0 chr13 109716164 109716296 -10568016 - L1Md_F2 LINE L1 0 6582 6443 3 1422 302 29 0 0 chr13 109716296 109716330 -10567982 + L1_Mus1 LINE L1 6420 6453 -114 3 1422 947 236 27 23 chr13 109716800 109717021 -10567291 - ID_B1 SINE B4 -1 223 2 3 1422 754 183 0 27 chr13 109717088 109717273 -10567039 + (TG)n Simple_repeat Simple_repeat 1 180 0 3 1422 784 126 36 15 chr13 109717878 109718015 -10566297 - B1_Mus1 SINE Alu -7 141 2 3 1422 298 269 6 140 chr13 109718015 109718070 -10566242 - MT2B LTR ERVL -446 155 123 3 1422 339 321 118 7 chr13 109718313 109718448 -10565864 - MIR SINE MIR -27 235 86 3 1422 306 0 0 0 chr13 109719080 109719114 -10565198 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1422 250 256 55 11 chr13 109719251 109719342 -10564970 - Lx7 LINE L1 -385 7311 7217 3 1422 627 51 0 0 chr13 109719726 109719805 -10564507 + (TC)n Simple_repeat Simple_repeat 2 80 0 3 1422 228 239 62 0 chr13 109721535 109721648 -10562664 + (TCTA)n Simple_repeat Simple_repeat 1 120 0 3 1422 219 261 34 0 chr13 109721617 109721705 -10562607 + (TATATG)n Simple_repeat Simple_repeat 3 93 0 3 1422 1582 194 110 3 chr13 109724616 109724972 -10559340 - ORR1B1 LTR MaLR 0 394 1 3 1422 855 85 16 0 chr13 109725305 109725434 -10558878 + B1_Mus1 SINE Alu 6 136 -12 3 1422 387 0 0 0 chr13 109725434 109725477 -10558835 + (CAAAA)n Simple_repeat Simple_repeat 4 46 0 3 1422 540 0 0 0 chr13 109726355 109726415 -10557897 + (TC)n Simple_repeat Simple_repeat 2 61 0 3 1422 345 24 0 0 chr13 109726415 109726456 -10557856 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1422 23 0 0 0 chr13 109727306 109727329 -10556983 + AT_rich Low_complexity Low_complexity 1 23 0 3 1422 664 315 37 106 chr13 109727882 109728287 -10556025 + MTEa LTR MaLR 1 377 -2 3 1422 1820 195 152 104 chr13 109729393 109729978 -10554334 - RMER20B LTR ERVK -14 613 1 3 1422 1860 335 64 70 chr13 109730591 109731941 -10552371 - Lx8 LINE L1 -75 7398 6057 3 1422 264 236 14 0 chr13 109731986 109732058 -10552254 - Lx9 LINE L1 -161 7483 7411 3 1422 1949 298 97 27 chr13 109732116 109732921 -10551391 - Lx9 LINE L1 -363 7281 6421 3 1422 207 0 0 0 chr13 109732935 109732958 -10551354 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 3 1422 203 88 0 29 chr13 109734195 109734230 -10550082 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 3 1422 4853 104 8 93 chr13 109734235 109735054 -10549258 - Lx LINE L1 -7 6647 5898 3 1422 28 29 0 0 chr13 109735369 109735404 -10548908 + AT_rich Low_complexity Low_complexity 1 35 0 3 1422 396 0 0 0 chr13 109735558 109735602 -10548710 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1422 664 257 30 38 chr13 109735607 109735807 -10548505 - L1MA4 LINE L1 -364 5936 5738 3 1422 3150 111 120 71 chr13 109735807 109736523 -10547789 - RMER17A LTR ERVK 0 751 1 3 1422 664 253 31 35 chr13 109736523 109736580 -10547732 - L1MA4 LINE L1 -563 5737 5686 3 1422 799 293 120 82 chr13 109737761 109738137 -10546175 - MLT1B LTR MaLR 0 390 1 3 1422 1386 261 114 19 chr13 109738989 109739458 -10544854 - L1MA9 LINE L1 -216 6084 5561 3 1422 369 0 0 0 chr13 109739458 109739499 -10544813 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1422 1386 243 113 43 chr13 109739499 109739924 -10544388 - L1MA9 LINE L1 -602 5560 5115 3 1422 689 284 23 37 chr13 109740188 109740404 -10543908 + B3 SINE B2 4 216 0 3 1422 717 243 44 66 chr13 109740409 109740590 -10543722 + B3 SINE B2 6 182 -34 3 1422 297 0 0 0 chr13 109740606 109740639 -10543673 + (CAAAC)n Simple_repeat Simple_repeat 5 37 0 3 1422 266 302 0 10 chr13 109741110 109741207 -10543105 - L1M1 LINE L1 -694 5609 5514 3 1422 233 332 56 27 chr13 109741221 109741558 -10542754 + L1M2 LINE L1 2835 3181 -2962 3 1422 333 0 0 0 chr13 109742136 109742173 -10542139 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 3 1422 749 247 31 46 chr13 109742177 109742372 -10541940 + B3 SINE B2 15 206 -10 3 1422 481 153 71 0 chr13 109742391 109742476 -10541836 - L1_Rod LINE L1 -109 5738 5648 3 1422 1766 264 18 5 chr13 109742477 109742914 -10541398 + Lx9 LINE L1 7023 7465 -179 3 1422 2872 231 139 11 chr13 109743009 109743811 -10540501 + RMER1B Other Other 65 1052 -14 3 1422 288 0 0 0 chr13 109744068 109744100 -10540212 + (TC)n Simple_repeat Simple_repeat 2 33 0 3 1422 2707 144 289 7 chr13 109744165 109744705 -10539607 - RLTR17 LTR ERVK 0 692 1 3 1422 198 0 0 0 chr13 109745222 109745244 -10539068 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1422 392 395 24 10 chr13 109745736 109746025 -10538287 - L4 LINE RTE -1677 352 60 3 1422 250 250 103 10 chr13 109746191 109746288 -10538024 - L1_Rod LINE L1 -27 5820 5715 3 1422 180 0 0 0 chr13 109746316 109746336 -10537976 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1422 758 286 75 45 chr13 109746336 109746695 -10537617 - L1_Mur3 LINE L1 -141 5739 5370 3 1422 10399 221 58 30 chr13 109746784 109749973 -10534339 - Lx6 LINE L1 0 7460 4201 3 1422 231 61 0 0 chr13 109749973 109750006 -10534306 + (TA)n Simple_repeat Simple_repeat 2 34 0 3 1422 10399 184 67 12 chr13 109750006 109750673 -10533639 - Lx6 LINE L1 -1680 4200 3481 3 1422 334 166 62 0 chr13 109751321 109751391 -10532921 - Lx7 LINE L1 -1843 5853 5748 3 1422 180 0 0 0 chr13 109751514 109751534 -10532778 + (A)n Simple_repeat Simple_repeat 1 20 0 3 1422 4822 130 20 8 chr13 109751598 109752357 -10531955 - Lx2B LINE L1 -646 6354 5587 3 1422 3876 159 6 5 chr13 109752366 109753017 -10531295 + Lx2B LINE L1 6348 6999 -1 3 1422 1472 141 72 4 chr13 109753031 109753280 -10531032 + RLTR15 LTR ERVK 3 268 -91 3 1422 558 63 0 0 chr13 109753284 109753363 -10530949 + (TTTC)n Simple_repeat Simple_repeat 4 82 0 3 1422 180 77 0 0 chr13 109753366 109753392 -10530920 + (TCTA)n Simple_repeat Simple_repeat 3 28 0 3 1422 447 100 0 0 chr13 109753422 109753482 -10530830 + RLTR15 LTR ERVK 300 359 0 3 1422 299 303 143 29 chr13 109753485 109753723 -10530589 + Charlie2b DNA MER1_type 2518 2782 0 3 1422 253 174 14 14 chr13 109754198 109754268 -10530044 + (TAGA)n Simple_repeat Simple_repeat 2 71 0 3 1422 1800 140 86 3 chr13 109755239 109755541 -10528771 - ORR1B2 LTR MaLR -40 327 1 3 1422 328 321 22 15 chr13 109756588 109756724 -10527588 + L1M3d LINE L1 737 873 -5018 3 1422 180 77 0 0 chr13 109756778 109756804 -10527508 + (CA)n Simple_repeat Simple_repeat 1 26 0 3 1422 555 16 0 0 chr13 109756804 109756867 -10527445 + (GA)n Simple_repeat Simple_repeat 2 65 0 3 1422 636 220 117 18 chr13 109756870 109757080 -10527232 - RLTR20A1 LTR ERVK -296 255 1 3 1422 192 40 0 0 chr13 109758992 109759017 -10525295 + (GA)n Simple_repeat Simple_repeat 2 26 0 3 1422 195 350 161 31 chr13 109759858 109760082 -10524230 + MIR SINE MIR 9 261 -1 3 1422 242 330 58 10 chr13 109760649 109760753 -10523559 - L2a LINE L2 -6 3420 3312 3 1422 26 0 0 0 chr13 109761124 109761150 -10523162 + AT_rich Low_complexity Low_complexity 1 26 0 3 1422 445 264 115 40 chr13 109761671 109761845 -10522467 + B3 SINE B2 30 216 0 3 1422 411 21 0 0 chr13 109763679 109763727 -10520585 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1422 227 31 0 30 chr13 109763749 109763782 -10520530 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 3 1422 195 42 0 0 chr13 109763823 109763847 -10520465 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 3 1422 451 272 8 26 chr13 109764001 109764118 -10520194 - PB1D10 SINE Alu -2 115 1 3 1422 1053 149 0 0 chr13 109764355 109764636 -10519676 + (TA)n Simple_repeat Simple_repeat 1 281 0 4 1422 566 254 90 42 chr13 109765449 109765638 -10518674 + B3A SINE B2 1 198 0 4 1422 286 278 42 104 chr13 109765750 109765991 -10518321 - L1MA4 LINE L1 -283 6017 5792 4 1422 1055 149 54 59 chr13 109766477 109766698 -10517614 - URR1B DNA MER1_type -2 223 4 4 1422 249 163 0 0 chr13 109767237 109767286 -10517026 + (TG)n Simple_repeat Simple_repeat 1 49 0 4 1422 306 148 0 0 chr13 109767488 109767542 -10516770 + (CATA)n Simple_repeat Simple_repeat 1 54 0 4 1422 370 330 77 31 chr13 109768316 109768538 -10515774 + MIR SINE MIR 1 232 -30 4 1422 1032 90 0 0 chr13 109768559 109768704 -10515608 + (CATA)n Simple_repeat Simple_repeat 2 146 0 4 1422 198 0 0 0 chr13 109768973 109768995 -10515317 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1422 414 0 0 0 chr13 109769079 109769125 -10515187 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1422 230 224 30 0 chr13 109771343 109771410 -10512902 - Lx7 LINE L1 -16 7680 7612 4 1422 180 245 0 0 chr13 109771493 109771546 -10512766 + GA-rich Low_complexity Low_complexity 2 54 0 4 1422 261 176 39 0 chr13 109771546 109771597 -10512715 - Lx7 LINE L1 -382 7314 7262 4 1422 279 0 0 0 chr13 109771789 109771820 -10512492 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1422 23 33 0 0 chr13 109772612 109772642 -10511670 + AT_rich Low_complexity Low_complexity 1 30 0 4 1422 249 159 0 0 chr13 109773577 109773621 -10510691 + T-rich Low_complexity Low_complexity 1 44 0 4 1422 310 265 0 14 chr13 109775194 109775263 -10509049 + MLT1D LTR MaLR 12 79 -426 4 1422 680 259 33 33 chr13 109775782 109775994 -10508318 + MLT1D LTR MaLR 284 495 -10 4 1422 741 23 0 0 chr13 109776176 109776263 -10508049 + (GAA)n Simple_repeat Simple_repeat 1 87 0 4 1422 234 0 0 0 chr13 109776263 109776289 -10508023 + (CAA)n Simple_repeat Simple_repeat 1 26 0 4 1422 774 188 14 11 chr13 109776291 109776579 -10507733 + GA-rich Low_complexity Low_complexity 1 289 0 4 1422 212 301 51 102 chr13 109776580 109776717 -10507595 + B2_Mm1a SINE B2 5 134 -59 4 1422 468 0 0 0 chr13 109776751 109776803 -10507509 + (TAA)n Simple_repeat Simple_repeat 3 54 0 4 1422 1879 256 30 37 chr13 109777111 109777602 -10506710 + Lx6 LINE L1 6947 7434 -26 4 1422 271 376 34 38 chr13 109778197 109778270 -10506042 - MT2A LTR ERVL -298 235 2 4 1422 455 323 6 25 chr13 109778270 109778432 -10505880 - MTEa LTR MaLR -219 160 2 4 1422 198 0 0 0 chr13 109778778 109778800 -10505512 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 4 1422 370 316 21 28 chr13 109778809 109779037 -10505275 - L1MA9 LINE L1 -442 5849 5618 4 1422 487 296 47 64 chr13 109779063 109779359 -10504953 + B4A SINE B4 2 292 0 4 1422 695 285 71 9 chr13 109779531 109779867 -10504445 - L1MA9 LINE L1 -690 5610 5254 4 1422 29 47 0 0 chr13 109779913 109779956 -10504356 + AT_rich Low_complexity Low_complexity 1 43 0 4 1422 240 239 29 15 chr13 109780165 109780233 -10504079 - MIRb SINE MIR -52 216 148 4 1422 517 103 13 0 chr13 109781003 109781081 -10503231 - Lx4A LINE L1 -426 6632 6554 4 1422 1637 181 42 10 chr13 109781083 109781389 -10502923 + Lx4A LINE L1 6740 7055 -3 4 1422 24 53 0 0 chr13 109781389 109781427 -10502885 + AT_rich Low_complexity Low_complexity 1 38 0 4 1422 396 0 0 0 chr13 109781575 109781619 -10502693 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1422 285 29 0 0 chr13 109782674 109782708 -10501604 + (TCTG)n Simple_repeat Simple_repeat 4 37 0 4 1422 240 316 53 0 chr13 109782719 109782814 -10501498 - PB1D10 SINE Alu -12 105 6 4 1422 860 301 72 25 chr13 109782864 109783184 -10501128 - Lx8 LINE L1 -806 6667 6333 4 1422 349 272 131 20 chr13 109783184 109783336 -10500976 - ORR1D1 LTR MaLR -7 367 205 4 1422 246 396 37 11 chr13 109783646 109783835 -10500477 - L2 LINE L2 -506 2913 2720 4 1422 442 291 60 0 chr13 109784024 109784141 -10500171 + ID_B1 SINE B4 100 223 -1 4 1422 559 199 138 28 chr13 109784993 109785174 -10499138 - Lx9 LINE L1 -70 7574 7374 4 1422 918 67 0 0 chr13 109785720 109785855 -10498457 + (TC)n Simple_repeat Simple_repeat 2 136 0 4 1422 267 194 0 27 chr13 109787373 109787447 -10496865 + Lx3C LINE L1 6894 6965 -11 4 1422 191 321 215 25 chr13 109787557 109787720 -10496592 - MIR SINE MIR -66 196 3 4 1422 229 208 0 0 chr13 109789396 109789449 -10494863 + T-rich Low_complexity Low_complexity 1 53 0 4 1422 284 324 87 33 chr13 109789751 109789901 -10494411 - MLT1H2 LTR MaLR -38 451 294 4 1422 650 319 114 28 chr13 109789975 109790336 -10493976 - MLT2D LTR ERVL -5 392 1 4 1422 2173 275 49 76 chr13 109790691 109791609 -10492703 + Lx8 LINE L1 6581 7473 0 4 1422 230 330 11 22 chr13 109791618 109791708 -10492604 - MLT1H2-int LTR MaLR -743 666 578 4 1422 318 0 0 0 chr13 109791931 109791968 -10492344 + U2 snRNA snRNA 1 37 -151 4 1422 1730 41 9 5 chr13 109793216 109793437 -10490875 + L1Md_F3 LINE L1 6360 6581 -3 4 1422 25 0 0 0 chr13 109793437 109793462 -10490850 + AT_rich Low_complexity Low_complexity 1 25 0 4 1422 260 336 36 0 chr13 109793858 109793968 -10490344 - MER58B DNA MER1_type 0 341 228 4 1422 322 269 58 0 chr13 109794025 109794129 -10490183 + Tigger7 DNA MER2_type 9 118 -2373 4 1422 388 355 32 23 chr13 109794122 109794338 -10489974 + Tigger7 DNA MER2_type 2271 2488 -3 4 1422 248 318 28 9 chr13 109794774 109794882 -10489430 - MamSINE1 SINE tRNA -151 139 30 4 1422 22 56 0 0 chr13 109795423 109795459 -10488853 + AT_rich Low_complexity Low_complexity 1 36 0 4 1422 486 358 13 7 chr13 109795680 109795829 -10488483 + RSINE1 SINE B4 16 165 0 4 1422 350 334 61 67 chr13 109796621 109796967 -10487345 + MER95 LTR ERV 88 431 0 4 1422 30 27 0 0 chr13 109796986 109797023 -10487289 + AT_rich Low_complexity Low_complexity 1 37 0 4 1422 415 365 65 22 chr13 109797772 109797957 -10486355 + B3 SINE B2 20 212 -4 4 1422 447 332 9 56 chr13 109798042 109798275 -10486037 + L3 LINE CR1 3539 3760 -729 4 1422 1059 110 127 6 chr13 109798345 109798518 -10485794 + B2_Mm2 SINE B2 1 194 -1 4 1422 2012 272 119 39 chr13 109798735 109799564 -10484748 + Lx9 LINE L1 6460 7355 -289 4 1422 22 56 0 0 chr13 109799572 109799608 -10484704 + AT_rich Low_complexity Low_complexity 1 36 0 4 1422 625 291 26 19 chr13 109799946 109800141 -10484171 + B3A SINE B2 1 199 -17 4 1422 324 0 0 0 chr13 109800656 109800692 -10483620 + (GA)n Simple_repeat Simple_repeat 1 36 0 4 1422 25 51 0 0 chr13 109802045 109802084 -10482228 + AT_rich Low_complexity Low_complexity 1 39 0 4 1422 509 322 145 8 chr13 109802604 109802998 -10481314 - L1MA9 LINE L1 -161 6151 5704 4 1422 242 276 175 10 chr13 109803050 109803244 -10481068 - L1MA9 LINE L1 -762 5529 5304 4 1422 459 0 0 0 chr13 109803253 109803304 -10481008 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 1422 274 157 19 19 chr13 109803305 109803357 -10480955 - RLTR20A LTR ERVK -124 417 366 4 1422 294 316 12 25 chr13 109803393 109803474 -10480838 - ID4 SINE ID -1 82 3 4 1422 1924 291 57 80 chr13 109803769 109805172 -10479140 - L1MA9 LINE L1 -850 5290 3920 4 1422 1074 283 54 21 chr13 109805172 109805508 -10478804 - Lx8 LINE L1 -378 7095 6749 4 1422 490 327 125 67 chr13 109805501 109805861 -10478451 + Lx8 LINE L1 7087 7467 -6 4 1422 525 293 141 38 chr13 109806007 109806326 -10477986 + RMER21B LTR ERV1 216 567 -275 4 1422 428 379 101 44 chr13 109806386 109806684 -10477628 + ORR1E LTR MaLR 43 357 -2 4 1422 7954 59 3 2 chr13 109807037 109808293 -10476019 - L1Md_F2 LINE L1 -8 6574 5318 4 1422 9246 58 1 2 chr13 109808291 109809477 -10474835 + L1Md_F2 LINE L1 4126 5310 -573 4 1422 330 302 70 16 chr13 109809604 109809732 -10474580 + MIR SINE MIR 53 187 -75 4 1422 25 0 0 0 chr13 109810279 109810304 -10474008 + AT_rich Low_complexity Low_complexity 1 25 0 4 1422 1041 147 179 0 chr13 109810798 109810988 -10473324 - URR1A DNA MER1_type -2 224 1 4 1422 464 341 16 58 chr13 109811693 109811883 -10472429 + B3A SINE B2 15 196 -2 4 1422 1285 204 119 12 chr13 109811910 109812237 -10472075 + Lx9 LINE L1 7282 7643 -1 4 1422 490 290 132 9 chr13 109812259 109812478 -10471834 - MER2 DNA MER2_type -85 260 15 4 1422 193 297 40 0 chr13 109812664 109812738 -10471574 - L2b LINE L2 0 3375 3299 4 1422 279 0 0 0 chr13 109812988 109813019 -10471293 + (TG)n Simple_repeat Simple_repeat 1 31 0 4 1422 585 61 0 0 chr13 109813019 109813100 -10471212 + (GA)n Simple_repeat Simple_repeat 1 82 0 4 1422 2120 79 6 62 chr13 109813293 109813616 -10470696 - L1Md_F2 LINE L1 -12 6570 6266 4 1422 2585 54 0 0 chr13 109813617 109813932 -10470380 + L1Md_F2 LINE L1 5944 6258 -324 4 1422 679 291 74 20 chr13 109814301 109814708 -10469604 + Lx9 LINE L1 7214 7642 -2 4 1422 25 31 0 0 chr13 109814762 109814794 -10469518 + AT_rich Low_complexity Low_complexity 1 32 0 4 1422 22 35 0 0 chr13 109815585 109815614 -10468698 + AT_rich Low_complexity Low_complexity 1 29 0 4 1422 6603 105 10 4 chr13 109815639 109817001 -10467311 - L1_Mus4 LINE L1 -135 6501 5157 4 1422 1081 90 0 0 chr13 109817008 109817152 -10467160 + B1_Mus1 SINE Alu 5 148 0 4 1422 240 163 0 0 chr13 109817594 109817637 -10466675 + (TA)n Simple_repeat Simple_repeat 1 43 0 4 1422 688 214 0 11 chr13 109817720 109817900 -10466412 + (TA)n Simple_repeat Simple_repeat 2 179 0 4 1422 22 0 0 0 chr13 109818325 109818347 -10465965 + AT_rich Low_complexity Low_complexity 1 22 0 4 1422 1174 41 7 0 chr13 109818356 109818501 -10465811 + B1_Mm SINE Alu 1 146 -1 4 1422 5514 165 35 10 chr13 109819334 109820096 -10464216 + Lx7 LINE L1 4289 5059 -821 4 1422 216 0 0 0 chr13 109820096 109820120 -10464192 + (CAA)n Simple_repeat Simple_repeat 1 24 0 4 1422 5514 165 35 10 chr13 109820120 109820440 -10463872 + Lx7 LINE L1 5060 5397 -483 4 1422 958 238 58 58 chr13 109820438 109820746 -10463566 + Lx7 LINE L1 5641 5948 -1748 4 1422 2711 209 59 14 chr13 109820775 109821405 -10462907 - Lx2B LINE L1 0 7000 6343 4 1422 186 43 0 0 chr13 109821706 109821729 -10462583 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1422 474 298 141 0 chr13 109821961 109822152 -10462160 + ID_B1 SINE B4 3 220 -4 4 1422 214 327 0 18 chr13 109822178 109822234 -10462078 + B1F1 SINE Alu 4 58 -91 4 1422 213 39 0 0 chr13 109822295 109822321 -10461991 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 4 1422 357 277 18 0 chr13 109822334 109822458 -10461854 + ID4 SINE ID 3 129 -23 4 1422 21 0 0 0 chr13 109822492 109822513 -10461799 + AT_rich Low_complexity Low_complexity 1 21 0 5 1422 875 318 94 96 chr13 109824210 109824771 -10459541 - MER68 LTR ERVL -3 560 1 5 1422 405 145 0 0 chr13 109825542 109825618 -10458694 + (TG)n Simple_repeat Simple_repeat 2 77 0 5 1422 697 185 129 56 chr13 109826095 109826273 -10458039 - B2_Mm2 SINE B2 -2 193 3 5 1422 418 279 80 40 chr13 109826274 109826504 -10457808 - L1M5 LINE L1 -720 5454 5218 5 1422 396 0 0 0 chr13 109827370 109827414 -10456898 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1422 22 0 0 0 chr13 109829021 109829043 -10455269 + AT_rich Low_complexity Low_complexity 1 22 0 5 1422 22 35 0 0 chr13 109830465 109830494 -10453818 + AT_rich Low_complexity Low_complexity 1 29 0 5 1422 688 244 228 22 chr13 109830517 109830785 -10453527 - ORR1D1 LTR MaLR -51 323 1 5 1422 300 151 81 11 chr13 109830835 109830922 -10453390 - Lx9 LINE L1 -1 7643 7551 5 1422 252 204 19 0 chr13 109830910 109830964 -10453348 - Lx9 LINE L1 -968 6676 6622 5 1422 2012 113 0 104 chr13 109831639 109831986 -10452326 - RLTR10E LTR ERVK 0 311 1 5 1422 1196 178 51 0 chr13 109832344 109832558 -10451754 + URR1B DNA MER1_type 1 225 0 5 1422 241 254 0 53 chr13 109833449 109833524 -10450788 + CT-rich Low_complexity Low_complexity 2 72 0 5 1422 246 105 0 0 chr13 109833755 109833793 -10450519 + (CAGA)n Simple_repeat Simple_repeat 3 40 0 5 1422 207 217 0 21 chr13 109834341 109834388 -10449924 + (TATG)n Simple_repeat Simple_repeat 3 48 0 5 1422 249 33 0 0 chr13 109834820 109834850 -10449462 + (T)n Simple_repeat Simple_repeat 1 30 0 5 1422 377 181 10 21 chr13 109834992 109835088 -10449224 + Lx6 LINE L1 7356 7450 -10 5 1422 731 255 56 5 chr13 109836875 109837072 -10447240 + B3 SINE B2 1 207 -9 5 1422 533 15 15 0 chr13 109837959 109838025 -10446287 + (TTTC)n Simple_repeat Simple_repeat 3 69 0 5 177 966 288 119 133 chr13 109838135 109839100 -10445212 - Arthur1 DNA Tip100 -101 3846 2895 5 1423 1269 85 0 0 chr13 109839276 109839452 -10444860 + (CA)n Simple_repeat Simple_repeat 2 177 0 5 1423 866 325 27 68 chr13 109839616 109840028 -10444284 - MLT1C LTR MaLR -9 458 64 5 1423 446 224 41 0 chr13 109840061 109840159 -10444153 + L2a LINE L2 3321 3422 -4 5 1423 1106 95 0 0 chr13 109841390 109841537 -10442775 + B1_Mus2 SINE Alu 1 147 0 5 1423 518 108 0 12 chr13 109841538 109841622 -10442690 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 5 1423 204 40 0 0 chr13 109841665 109841690 -10442622 + (GAAAA)n Simple_repeat Simple_repeat 1 25 0 5 1423 1141 55 7 40 chr13 109842089 109842240 -10442072 - B1_Mus1 SINE Alu -1 147 2 5 1423 634 262 18 97 chr13 109842269 109842441 -10441871 + B3 SINE B2 2 169 -47 5 1423 219 114 0 0 chr13 109842441 109842476 -10441836 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1423 634 262 18 97 chr13 109842476 109842531 -10441781 + B3 SINE B2 170 211 -5 5 1423 22 0 0 0 chr13 109843895 109843917 -10440395 + AT_rich Low_complexity Low_complexity 1 22 0 5 1423 493 276 56 72 chr13 109845213 109845408 -10438904 - B3A SINE B2 -6 192 1 5 1423 1010 124 17 0 chr13 109845455 109845632 -10438680 - Lx2A1 LINE L1 -4 7004 6825 5 1423 1289 233 144 2 chr13 109845705 109845992 -10438320 + Lx9 LINE L1 7177 7495 -149 5 1423 315 0 0 0 chr13 109845992 109846027 -10438285 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1423 1289 233 144 2 chr13 109846027 109846148 -10438164 + Lx9 LINE L1 7496 7642 -2 5 1423 4443 21 33 0 chr13 109846630 109847148 -10437164 - L1Md_F2 LINE L1 -14 6568 6034 5 1423 3663 147 9 57 chr13 109847933 109848605 -10435707 + RLTR26 LTR ERVK 1 640 -2 5 1423 194 345 34 11 chr13 109849419 109849507 -10434805 + MIR SINE MIR 141 230 -32 5 1423 420 20 0 0 chr13 109849693 109849742 -10434570 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 5 1423 1069 232 0 30 chr13 109849745 109849945 -10434367 - B3 SINE B2 -14 202 9 5 1423 765 180 189 11 chr13 109850110 109850301 -10434011 - URR1B DNA MER1_type 0 225 1 5 1423 257 274 23 35 chr13 109850439 109850526 -10433786 + GA-rich Low_complexity Low_complexity 3 88 0 5 1423 593 267 23 0 chr13 109851365 109851496 -10432816 + RSINE1 SINE B4 3 136 -29 5 1423 279 0 0 0 chr13 109851511 109851542 -10432770 + (TC)n Simple_repeat Simple_repeat 1 31 0 5 1423 249 108 0 0 chr13 109851546 109851583 -10432729 + (TA)n Simple_repeat Simple_repeat 1 37 0 5 1423 180 97 0 0 chr13 109851722 109851753 -10432559 + (T)n Simple_repeat Simple_repeat 1 31 0 5 1423 3561 65 20 0 chr13 109851755 109852214 -10432098 - L1Md_F3 LINE L1 -14 6570 6103 5 1423 1734 226 77 5 chr13 109852370 109852749 -10431563 + MTC LTR MaLR 3 408 -13 5 1423 1002 266 86 23 chr13 109854123 109854179 -10430133 + MTE2b LTR MaLR 16 69 -310 5 1423 1419 130 4 43 chr13 109854179 109854412 -10429900 + URR1A DNA MER1_type 3 226 0 5 1423 1002 263 120 19 chr13 109854412 109854668 -10429644 + MTE2b LTR MaLR 70 340 -30 5 1423 234 0 0 0 chr13 109854668 109854694 -10429618 + (TTG)n Simple_repeat Simple_repeat 2 27 0 5 1423 263 259 159 14 chr13 109854694 109854717 -10429595 + MTE2b LTR MaLR 341 370 0 5 1423 248 211 35 17 chr13 109854743 109854801 -10429511 + GA-rich Low_complexity Low_complexity 1 59 0 5 1423 906 130 112 70 chr13 109855115 109855330 -10428982 - URR1A DNA MER1_type -2 224 1 5 1423 225 262 23 23 chr13 109856332 109856418 -10427894 + GA-rich Low_complexity Low_complexity 2 87 0 5 1423 244 284 15 0 chr13 109857554 109857621 -10426691 + MIR SINE MIR 89 156 -106 5 1423 495 347 164 51 chr13 109858036 109858464 -10425848 + L1M4b LINE L1 112 587 -6747 5 1423 252 338 22 7 chr13 109858522 109858659 -10425653 + L1M4b LINE L1 641 779 -6555 5 1423 320 346 111 42 chr13 109858783 109858973 -10425339 + L1M4b LINE L1 899 1101 -6233 5 1423 1960 63 0 8 chr13 109859295 109859574 -10424738 - L1Md_F2 LINE L1 0 6582 6311 5 1423 282 162 27 13 chr13 109860019 109860094 -10424218 + CT-rich Low_complexity Low_complexity 2 77 0 5 1423 186 289 0 0 chr13 109860460 109860505 -10423807 + L2 LINE L2 2692 2736 -683 5 1423 392 339 124 68 chr13 109862950 109863273 -10421039 + MLT1A LTR MaLR 33 373 -1 5 1423 395 222 133 0 chr13 109863309 109863399 -10420913 + PB1D7 SINE Alu 11 112 -8 5 1423 240 100 0 0 chr13 109863400 109863440 -10420872 + (CCAA)n Simple_repeat Simple_repeat 1 40 0 5 1423 249 351 88 16 chr13 109863582 109863777 -10420535 + MIRb SINE MIR 53 257 -5 5 1423 196 111 62 16 chr13 109864021 109864085 -10420227 + (CAAA)n Simple_repeat Simple_repeat 2 68 0 5 1423 371 261 50 16 chr13 109864391 109864512 -10419800 - MER5A1 DNA MER1_type 0 166 42 5 1423 320 259 52 9 chr13 109864911 109865047 -10419265 - B1_Mus2 SINE Alu -2 147 2 5 1423 272 233 0 62 chr13 109864993 109865057 -10419255 - B4A SINE B4 -152 140 81 5 1423 511 284 119 12 chr13 109865057 109865385 -10418927 + L1M2 LINE L1 4859 5221 -922 5 1423 285 146 5 15 chr13 109865419 109865486 -10418826 - Lx7 LINE L1 0 7696 7639 5 1423 313 298 122 2 chr13 109865497 109865693 -10418619 + L1M2 LINE L1 5214 5435 -807 5 1423 467 302 41 6 chr13 109865705 109865875 -10418437 + B3A SINE B2 5 180 -18 5 1423 389 304 44 60 chr13 109865942 109866194 -10418118 + Lx8 LINE L1 7216 7463 -10 5 1423 498 198 23 11 chr13 109866205 109866379 -10417933 + (TA)n Simple_repeat Simple_repeat 2 177 0 5 1423 23 54 0 0 chr13 109866386 109866423 -10417889 + AT_rich Low_complexity Low_complexity 1 37 0 5 1423 206 208 40 40 chr13 109866466 109866541 -10417771 + L3 LINE CR1 1891 1965 -2524 5 1423 24 32 0 0 chr13 109866580 109866611 -10417701 + AT_rich Low_complexity Low_complexity 1 31 0 5 1423 365 313 57 57 chr13 109866747 109867119 -10417193 + Lx7 LINE L1 5395 5766 -81 5 1423 252 238 0 0 chr13 109867327 109867390 -10416922 + GA-rich Low_complexity Low_complexity 4 66 0 5 1423 319 282 35 0 chr13 109867390 109867475 -10416837 + HAL1-3A_ME LINE L1 2284 2371 -487 5 1423 23 0 0 0 chr13 109867834 109867857 -10416455 + AT_rich Low_complexity Low_complexity 1 23 0 5 1423 1241 157 76 5 chr13 109868374 109868585 -10415727 + URR1A DNA MER1_type 1 226 0 5 1423 2805 135 2 2 chr13 109868689 109869119 -10415193 - Lx2 LINE L1 -1 6996 6567 5 1423 1663 169 105 6 chr13 109871598 109871932 -10412380 + ORR1B2 LTR MaLR 1 367 0 5 1423 216 0 0 0 chr13 109872364 109872388 -10411924 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1423 513 319 24 6 chr13 109873187 109873357 -10410955 + MIR SINE MIR 69 241 -21 5 1423 240 183 33 0 chr13 109874185 109874245 -10410067 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1423 2869 209 16 28 chr13 109874245 109874924 -10409388 - Lx2B LINE L1 -17 6983 6313 5 1423 347 316 81 35 chr13 109874929 109875126 -10409186 - MLT1C LTR MaLR -2 465 260 5 1423 6135 42 3 8 chr13 109875195 109875955 -10408357 - L1Md_F2 LINE L1 0 6582 5827 5 1423 347 283 62 54 chr13 109878244 109878356 -10405956 - B3 SINE B2 0 216 104 5 1423 1235 123 8 107 chr13 109878356 109878619 -10405693 + L1_Mur2 LINE L1 5125 5361 -516 5 1423 22 56 0 0 chr13 109878621 109878657 -10405655 + AT_rich Low_complexity Low_complexity 1 36 0 5 1423 220 65 65 0 chr13 109878711 109878757 -10405555 + (CAAAAA)n Simple_repeat Simple_repeat 2 50 0 5 1423 439 335 47 23 chr13 109879463 109879677 -10404635 - MIR SINE MIR -30 232 14 5 1423 212 245 0 0 chr13 109879734 109879787 -10404525 + A-rich Low_complexity Low_complexity 3 55 0 5 1423 340 281 19 54 chr13 109880786 109880977 -10403335 - L1_Mur3 LINE L1 -812 5068 4860 5 1423 263 326 21 42 chr13 109880986 109881082 -10403230 + RMER12 LTR ERVK 743 836 -486 5 1423 405 0 0 0 chr13 109881086 109881131 -10403181 + (TG)n Simple_repeat Simple_repeat 2 46 0 5 1423 248 292 45 0 chr13 109881132 109881221 -10403091 - L1_Mur3 LINE L1 -1041 4839 4747 5 1423 180 0 0 0 chr13 109881221 109881241 -10403071 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 5 1423 216 0 0 0 chr13 109881246 109881270 -10403042 + (GTTTG)n Simple_repeat Simple_repeat 5 28 0 5 1423 477 276 48 26 chr13 109881277 109881504 -10402808 - L1M2 LINE L1 -1346 4797 4566 5 1423 555 246 153 39 chr13 109881642 109881859 -10402453 + L1MA5 LINE L1 5461 5713 -587 5 1423 2669 75 129 5 chr13 109881859 109882261 -10402051 + RLTR44E LTR ERVK 1 452 0 6 1423 555 262 151 37 chr13 109882261 109882540 -10401772 + L1MA5 LINE L1 5714 6017 -286 5 1423 22 35 0 0 chr13 109882578 109882607 -10401705 + AT_rich Low_complexity Low_complexity 1 29 0 6 1423 448 364 37 71 chr13 109883442 109883738 -10400574 - MLT1F2 LTR MaLR -252 308 23 6 1423 39 80 0 0 chr13 109884047 109884135 -10400177 + AT_rich Low_complexity Low_complexity 1 88 0 6 1423 477 99 0 0 chr13 109885412 109885493 -10398819 + (TC)n Simple_repeat Simple_repeat 1 81 0 6 1423 30 0 0 0 chr13 109885630 109885660 -10398652 + AT_rich Low_complexity Low_complexity 1 30 0 6 1423 1118 78 0 0 chr13 109885666 109885807 -10398505 - B1_Mus1 SINE Alu -6 142 2 6 1423 677 264 36 46 chr13 109886713 109886908 -10397404 - B3 SINE B2 -23 193 1 6 1423 293 370 13 13 chr13 109887551 109887707 -10396605 + L2a LINE L2 3271 3426 0 6 1423 390 320 82 0 chr13 109888299 109888421 -10395891 + RSINE1 SINE B4 4 135 -30 6 1423 357 24 0 0 chr13 109888422 109888464 -10395848 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1423 25 31 0 0 chr13 109888594 109888626 -10395686 + AT_rich Low_complexity Low_complexity 1 32 0 6 1423 4712 88 11 3 chr13 109888771 109889440 -10394872 - L1_Mus4 LINE L1 -2 6634 5961 6 1423 1153 55 0 7 chr13 109890152 109890299 -10394013 + B1_Mus2 SINE Alu 1 146 -1 6 1423 238 295 92 31 chr13 109890811 109890909 -10393403 - L2 LINE L2 -474 2945 2842 6 1423 420 294 43 22 chr13 109891025 109891209 -10393103 - MER5A DNA MER1_type 0 189 2 6 1423 459 0 0 0 chr13 109891823 109891874 -10392438 + (TA)n Simple_repeat Simple_repeat 1 51 0 6 1423 263 311 93 64 chr13 109892810 109892982 -10391330 - MER58B DNA MER1_type -6 335 159 6 1423 773 110 8 0 chr13 109893130 109893257 -10391055 + (TAGA)n Simple_repeat Simple_repeat 2 129 0 6 1423 237 279 150 39 chr13 109893272 109893399 -10390913 - MIRb SINE MIR -1 267 127 6 1423 947 159 196 0 chr13 109893492 109893706 -10390606 - Lx2B LINE L1 -4 6996 6741 6 1423 521 290 6 36 chr13 109894173 109894341 -10389971 + RSINE1 SINE B4 3 165 0 6 1423 414 57 0 0 chr13 109894474 109894527 -10389785 + (TA)n Simple_repeat Simple_repeat 2 54 0 6 1423 465 219 0 0 chr13 109895145 109895259 -10389053 + (TA)n Simple_repeat Simple_repeat 2 115 0 6 1423 396 0 0 0 chr13 109895335 109895379 -10388933 + (TA)n Simple_repeat Simple_repeat 2 45 0 6 1423 197 114 0 64 chr13 109895532 109895579 -10388733 + T-rich Low_complexity Low_complexity 1 44 0 6 1423 8142 43 4 0 chr13 109895581 109896954 -10387358 - L1Md_F2 LINE L1 -4 6578 5201 6 1423 203 0 0 36 chr13 109897269 109897297 -10387015 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 6 1423 228 67 0 0 chr13 109897361 109897391 -10386921 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1423 499 296 7 4 chr13 109897410 109897552 -10386760 - B3 SINE B2 -55 140 2 6 1423 261 234 9 18 chr13 109898265 109898378 -10385934 + CT-rich Low_complexity Low_complexity 3 114 0 6 1423 305 371 97 0 chr13 109898435 109898559 -10385753 - B1F2 SINE Alu -13 136 1 6 1423 323 312 94 62 chr13 109898851 109899085 -10385227 - L1M5 LINE L1 -680 5560 5317 6 1423 327 293 0 42 chr13 109899906 109900002 -10384310 - Kanga11a DNA Tc2 -433 537 446 6 1423 252 0 0 0 chr13 109900167 109900195 -10384117 + (TA)n Simple_repeat Simple_repeat 1 28 0 6 1423 1315 89 16 21 chr13 109900200 109900394 -10383918 - B2_Mm2 SINE B2 -1 194 2 6 1423 381 318 138 28 chr13 109900828 109901009 -10383303 + L2a LINE L2 3210 3410 -16 6 1423 735 50 0 0 chr13 109901264 109901364 -10382948 + (TC)n Simple_repeat Simple_repeat 2 101 0 6 1423 236 311 113 28 chr13 109902525 109902631 -10381681 - LTR87 LTR ERVL? -276 348 234 6 1423 21 0 0 0 chr13 109904089 109904110 -10380202 + AT_rich Low_complexity Low_complexity 1 21 0 6 1423 1084 130 39 28 chr13 109904327 109904509 -10379803 + B2_Mm2 SINE B2 2 185 -10 6 1423 201 247 0 0 chr13 109907004 109907085 -10377227 + (CCG)n Simple_repeat Simple_repeat 2 82 0 6 1423 281 26 0 26 chr13 109907483 109907522 -10376790 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1423 243 152 0 0 chr13 109907973 109908019 -10376293 + (TG)n Simple_repeat Simple_repeat 1 46 0 6 1423 333 0 0 0 chr13 109908317 109908354 -10375958 + (CA)n Simple_repeat Simple_repeat 1 37 0 6 1423 326 123 0 17 chr13 109908355 109908413 -10375899 + (GGGAGA)n Simple_repeat Simple_repeat 6 62 0 6 1423 322 256 62 69 chr13 109909686 109909816 -10374496 - MIRb SINE MIR -111 157 29 6 1423 503 164 10 0 chr13 109910164 109910268 -10374044 + (CA)n Simple_repeat Simple_repeat 1 105 0 6 1423 26 30 0 0 chr13 109911476 109911509 -10372803 + AT_rich Low_complexity Low_complexity 1 33 0 6 1423 498 0 0 0 chr13 109911560 109911622 -10372690 + L1Md_T LINE L1 6520 6581 -1 6 1423 250 278 70 30 chr13 109912232 109912332 -10371980 - B1_Mur1 SINE Alu 0 149 46 6 1423 453 269 118 0 chr13 109912245 109912364 -10371948 - ID_B1 SINE B4 -11 213 81 6 1423 864 164 6 24 chr13 109913663 109913832 -10370480 + Lx9 LINE L1 7345 7510 -134 6 1423 501 191 135 5 chr13 109913856 109914056 -10370256 + Lx9 LINE L1 7419 7644 0 6 1423 225 314 122 48 chr13 109914275 109914422 -10369890 - MIRc SINE MIR 0 268 111 6 1423 414 0 0 0 chr13 109914993 109915039 -10369273 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1423 195 338 137 34 chr13 109916333 109916661 -10367651 - L4 LINE RTE -40 1989 1628 6 1423 180 111 0 0 chr13 109916800 109916827 -10367485 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 6 1423 458 316 34 0 chr13 109917065 109917242 -10367070 + B4 SINE B4 42 224 -68 6 1423 279 380 123 19 chr13 109917770 109918030 -10366282 - L4 LINE RTE -1153 876 590 6 1423 199 300 57 57 chr13 109918179 109918285 -10366027 - L4 LINE RTE -1630 399 294 6 1423 928 284 87 45 chr13 109920560 109921012 -10363300 + L1MA7 LINE L1 5336 5794 -497 6 1423 1116 15 50 0 chr13 109921012 109921210 -10363102 + (CATA)n Simple_repeat Simple_repeat 1 207 0 6 1423 928 284 87 45 chr13 109921210 109921331 -10362981 + L1MA7 LINE L1 5795 5933 -358 6 1423 1289 264 120 47 chr13 109921569 109922157 -10362155 - Lx6 LINE L1 -2 7458 6464 6 1423 319 177 32 16 chr13 109922137 109922200 -10362112 - Lx6 LINE L1 -879 6581 6518 6 1423 2956 196 10 23 chr13 109922196 109923137 -10361175 - Lx6 LINE L1 -1183 6277 5346 6 1423 270 0 0 0 chr13 109924091 109924121 -10360191 + (CTATA)n Simple_repeat Simple_repeat 1 30 0 6 1423 207 164 49 0 chr13 109926427 109926488 -10357824 + (TA)n Simple_repeat Simple_repeat 2 65 0 6 1423 351 254 24 81 chr13 109927350 109927474 -10356838 - PB1D7 SINE Alu -2 118 2 6 1423 7807 61 5 2 chr13 109927846 109929035 -10355277 + L1_Mus1 LINE L1 5371 6563 -4 6 1423 359 315 144 48 chr13 109929821 109930008 -10354304 - MLT1E LTR MaLR 0 653 449 6 1423 254 296 238 17 chr13 109930029 109930201 -10354111 - MLT1E LTR MaLR -308 346 137 6 1423 228 264 22 22 chr13 109930290 109930379 -10353933 + (TATG)n Simple_repeat Simple_repeat 3 91 0 6 1423 1233 297 45 5 chr13 109931844 109932243 -10352069 - Lx8 LINE L1 -830 6643 6229 6 1423 225 274 15 169 chr13 109932466 109932602 -10351710 - MTE-int LTR MaLR -1289 291 177 6 1423 1120 262 64 70 chr13 109932603 109933384 -10350928 - L1M2 LINE L1 -352 5772 4989 6 1423 390 280 232 13 chr13 109933466 109933781 -10350531 + Charlie1b DNA MER1_type 139 522 -1 6 1423 325 300 62 28 chr13 109934339 109934483 -10349829 + B1F1 SINE Alu 1 149 0 6 1423 1203 47 0 0 chr13 109935043 109935193 -10349119 + (TTTCC)n Simple_repeat Simple_repeat 3 152 0 6 1423 324 322 50 0 chr13 109939140 109939276 -10345036 - MIR SINE MIR -45 163 21 6 1423 189 395 162 15 chr13 109939322 109939458 -10344854 - MIR SINE MIR -82 180 25 6 1423 1530 218 22 33 chr13 109940339 109940700 -10343612 - ORR1B2 LTR MaLR -10 357 1 6 1423 1463 271 61 2 chr13 109942167 109942563 -10341749 - Lx8 LINE L1 -6 7467 7049 6 1423 1669 299 29 19 chr13 109942585 109943107 -10341205 - Lx8 LINE L1 -492 6981 6455 6 1423 5192 176 35 6 chr13 109943492 109944569 -10339743 - Lx5 LINE L1 -438 6612 5489 6 1423 250 245 0 0 chr13 109945187 109945236 -10339076 + MIR3 SINE MIR 135 183 -25 6 1423 261 0 0 0 chr13 109946130 109946159 -10338153 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1423 23 33 0 0 chr13 109946890 109946920 -10337392 + AT_rich Low_complexity Low_complexity 1 30 0 6 1423 315 65 0 0 chr13 109948331 109948377 -10335935 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 6 1423 735 356 73 75 chr13 109948597 109949065 -10335247 - MLT1F LTR MaLR -79 469 3 6 1423 342 274 124 0 chr13 109949071 109949184 -10335128 - MLT1F-int LTR MaLR -1 1488 1362 6 1423 731 355 99 36 chr13 109949191 109949447 -10334865 - MLT1E1 LTR MaLR -1 653 383 6 1423 1332 126 42 5 chr13 109949447 109949663 -10334649 - URR1A DNA MER1_type 0 226 3 6 1423 731 355 99 36 chr13 109949663 109949879 -10334433 - MLT1E1 LTR MaLR -272 382 151 6 1423 1252 263 34 26 chr13 109950445 109950832 -10333480 - Lx5 LINE L1 -12 7038 6649 6 1423 27 0 0 0 chr13 109951782 109951809 -10332503 + AT_rich Low_complexity Low_complexity 1 27 0 6 1423 4859 206 45 17 chr13 109951886 109953055 -10331257 - Lx9 LINE L1 -3 7641 6440 6 1423 833 306 39 18 chr13 109953411 109953694 -10330618 - B4A SINE B4 -2 290 2 6 1423 237 143 179 0 chr13 109953772 109953828 -10330484 - L1M3 LINE L1 -705 5478 5413 6 1423 477 0 0 0 chr13 109956166 109956219 -10328093 + (TA)n Simple_repeat Simple_repeat 1 53 0 6 1423 579 228 128 29 chr13 109956232 109956404 -10327908 - B3A SINE B2 -9 189 1 6 1423 439 371 6 32 chr13 109956506 109956662 -10327650 - RSINE1 SINE B4 -6 159 8 6 1423 325 188 132 33 chr13 109957279 109957400 -10326912 + Lx9 LINE L1 7497 7629 -15 6 1423 321 256 162 29 chr13 109958188 109958291 -10326021 + PB1 SINE Alu 10 125 -2 6 1423 189 0 0 0 chr13 109959471 109959492 -10324820 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1423 952 293 126 42 chr13 109959595 109960208 -10324104 - MLT1E1A LTR MaLR -7 673 10 6 1423 414 268 115 61 chr13 109960343 109960621 -10323691 + L1ME4a LINE L1 5816 6108 -16 6 1423 466 274 0 40 chr13 109960631 109960783 -10323529 + B1F1 SINE Alu 2 147 -2 7 1423 264 30 0 0 chr13 109961342 109961375 -10322937 + (CA)n Simple_repeat Simple_repeat 2 34 0 7 1423 405 0 0 0 chr13 109961375 109961419 -10322893 + (GA)n Simple_repeat Simple_repeat 2 46 0 7 1423 211 182 0 0 chr13 109961860 109961893 -10322419 + polypurine Low_complexity Low_complexity 3 35 0 7 1423 237 299 142 64 chr13 109963801 109964019 -10320293 - MLT1J2 LTR MaLR -148 300 66 7 1423 405 0 0 0 chr13 109964675 109964720 -10319592 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1423 411 21 0 0 chr13 109964788 109964836 -10319476 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1423 2014 120 34 6 chr13 109964888 109965214 -10319098 + Lx2 LINE L1 6663 6997 0 7 1423 233 370 69 30 chr13 109965447 109965578 -10318734 - L3 LINE CR1 -465 4024 3889 7 1423 2369 143 52 17 chr13 109968001 109968407 -10315905 + MTC LTR MaLR 2 421 0 7 1423 200 281 0 50 chr13 109968494 109968554 -10315758 + MIRm SINE MIR 220 276 0 7 1423 373 320 26 19 chr13 109968921 109969077 -10315235 + CT-rich Low_complexity Low_complexity 4 160 0 7 1423 262 202 40 20 chr13 109969078 109969179 -10315133 + (TA)n Simple_repeat Simple_repeat 1 103 0 7 1423 435 83 0 0 chr13 109969190 109969250 -10315062 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 7 1424 184 154 39 0 chr13 109969482 109969534 -10314778 + (TA)n Simple_repeat Simple_repeat 1 54 0 7 1424 641 250 0 23 chr13 109969964 109970095 -10314217 + RSINE1 SINE B4 38 165 0 7 1424 650 254 3 3 chr13 109970095 109970439 -10313873 + (CA)n Simple_repeat Simple_repeat 1 344 0 7 1424 21 36 0 0 chr13 109970439 109970467 -10313845 + AT_rich Low_complexity Low_complexity 1 28 0 7 1424 1623 281 56 55 chr13 109971961 109972186 -10312126 - Lx7 LINE L1 -1293 6403 6188 7 1424 468 35 0 0 chr13 109972186 109972244 -10312068 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1424 513 47 0 0 chr13 109972244 109972307 -10312005 + (CA)n Simple_repeat Simple_repeat 1 64 0 7 1424 1623 282 55 47 chr13 109972307 109973194 -10311118 - Lx7 LINE L1 -1509 6187 5277 7 1424 272 218 34 22 chr13 109973292 109973381 -10310931 + T-rich Low_complexity Low_complexity 1 90 0 7 1424 1324 103 5 0 chr13 109973512 109973696 -10310616 + B2_Mm1a SINE B2 1 185 -8 7 1424 2570 118 37 94 chr13 109973788 109974275 -10310037 + Lx2A LINE L1 6550 7008 0 7 1424 355 323 66 77 chr13 109974360 109974541 -10309771 + B4 SINE B4 1 179 -113 7 1424 753 260 63 92 chr13 109974546 109974817 -10309495 - B4A SINE B4 -27 265 3 7 1424 943 144 23 23 chr13 109974872 109975049 -10309263 + B2_Mm2 SINE B2 1 177 -18 7 1424 213 213 0 0 chr13 109975049 109975096 -10309216 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 7 1424 304 265 113 64 chr13 109975674 109975815 -10308497 + B1F SINE Alu 1 148 -1 7 1424 234 157 19 19 chr13 109976141 109976157 -10308155 + (TTG)n Simple_repeat Simple_repeat 1 17 0 7 1424 234 0 0 0 chr13 109976157 109976183 -10308129 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 7 1424 234 157 19 19 chr13 109976183 109976218 -10308094 + (TTG)n Simple_repeat Simple_repeat 2 36 0 7 1424 207 348 99 52 chr13 109978142 109978333 -10305979 + MIRb SINE MIR 34 233 -35 7 1424 306 0 0 0 chr13 109978353 109978387 -10305925 + (TTG)n Simple_repeat Simple_repeat 1 34 0 7 1424 261 309 71 24 chr13 109978729 109978855 -10305457 - B1_Mus2 SINE Alu -12 135 4 7 1424 411 21 0 0 chr13 109979070 109979118 -10305194 + (T)n Simple_repeat Simple_repeat 1 48 0 7 1424 1213 55 0 0 chr13 109979118 109979264 -10305048 - B1_Mm SINE Alu 0 147 2 7 1424 1890 81 4 0 chr13 109979469 109979717 -10304595 - ORR1A2 LTR MaLR 0 327 79 7 1424 261 273 90 15 chr13 109981002 109981069 -10303243 + ID4 SINE ID 2 73 -10 7 1424 212 143 24 0 chr13 109981077 109981119 -10303193 + GA-rich Low_complexity Low_complexity 2 44 0 7 1424 444 87 47 47 chr13 109981157 109981242 -10303070 - L1_Mus3 LINE L1 -5 6633 6549 7 1424 249 108 0 0 chr13 109981280 109981317 -10302995 + (TC)n Simple_repeat Simple_repeat 1 37 0 7 1424 600 14 0 0 chr13 109982847 109982916 -10301396 + (TG)n Simple_repeat Simple_repeat 1 69 0 7 1424 486 0 0 0 chr13 109983229 109983283 -10301029 + (TG)n Simple_repeat Simple_repeat 1 54 0 7 1424 207 0 0 0 chr13 109983480 109983503 -10300809 + (TC)n Simple_repeat Simple_repeat 2 24 0 7 1424 313 224 50 19 chr13 109984280 109984516 -10299796 + (TATAA)n Simple_repeat Simple_repeat 1 243 0 7 1424 210 205 22 103 chr13 109984459 109984644 -10299668 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 7 1424 205 159 22 22 chr13 109984615 109984660 -10299652 + (TA)n Simple_repeat Simple_repeat 2 46 0 7 1424 21 0 0 0 chr13 109984737 109984758 -10299554 + AT_rich Low_complexity Low_complexity 1 21 0 7 1424 200 59 29 0 chr13 109985737 109985771 -10298541 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 7 1424 3252 275 54 85 chr13 109986008 109988275 -10296037 - L1_Mur3 LINE L1 -1008 4872 2676 7 1424 266 152 0 17 chr13 109988357 109988417 -10295895 + (TA)n Simple_repeat Simple_repeat 1 59 0 7 1424 256 327 48 24 chr13 109988672 109988838 -10295474 - L1_Rod LINE L1 -6508 664 495 7 1424 476 294 26 53 chr13 109989437 109989588 -10294724 - RSINE1 SINE B4 -17 148 2 7 1424 511 243 86 29 chr13 109989766 109989906 -10294406 + B1_Mus1 SINE Alu 1 148 0 7 1424 325 292 213 16 chr13 109990414 109990668 -10293644 - L2 LINE L2 -414 3005 2702 7 1424 220 91 45 0 chr13 109990768 109990812 -10293500 + (GA)n Simple_repeat Simple_repeat 1 46 0 7 1424 588 186 35 0 chr13 109990838 109991010 -10293302 + GA-rich Low_complexity Low_complexity 3 180 0 7 1424 353 20 41 0 chr13 109991349 109991398 -10292914 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 7 1424 33 43 0 0 chr13 109991816 109991863 -10292449 + AT_rich Low_complexity Low_complexity 1 47 0 7 1424 1117 78 7 0 chr13 109991947 109992089 -10292223 + B1_Mus2 SINE Alu 3 145 -2 7 1424 207 0 0 0 chr13 109992089 109992112 -10292200 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1424 414 0 0 0 chr13 109992179 109992225 -10292087 + (TA)n Simple_repeat Simple_repeat 1 46 0 7 1424 954 200 71 10 chr13 109992281 109992478 -10291834 - B3 SINE B2 -6 210 2 7 1424 202 128 26 0 chr13 109992490 109992529 -10291783 + (TTTG)n Simple_repeat Simple_repeat 4 43 0 7 1424 1174 55 7 0 chr13 109992529 109992674 -10291638 - B1_Mus1 SINE Alu 0 148 3 7 1424 3857 55 6 51 chr13 109992694 109993225 -10291087 - L1Md_F2 LINE L1 0 6582 6076 7 1424 396 0 0 0 chr13 109994189 109994233 -10290079 + (TG)n Simple_repeat Simple_repeat 1 44 0 7 1424 207 0 0 0 chr13 109994251 109994274 -10290038 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 7 1424 213 65 0 0 chr13 109994315 109994346 -10289966 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 7 1424 540 0 0 0 chr13 109994351 109994411 -10289901 + (TG)n Simple_repeat Simple_repeat 1 60 0 7 1424 473 273 86 0 chr13 109994691 109994819 -10289493 - B3A SINE B2 -58 140 2 7 1424 241 206 120 27 chr13 109996023 109996098 -10288214 - MIRb SINE MIR -21 247 166 7 1424 464 279 41 29 chr13 109996452 109996622 -10287690 - MLT1A LTR MaLR -12 362 191 7 1424 573 55 0 0 chr13 109996625 109996698 -10287614 + (TG)n Simple_repeat Simple_repeat 2 74 0 7 1424 30 45 0 0 chr13 109997020 109997064 -10287248 + AT_rich Low_complexity Low_complexity 1 44 0 7 1424 567 275 0 34 chr13 109997065 109997212 -10287100 - B1_Mur2 SINE Alu -7 142 1 7 1424 34 24 0 0 chr13 109997372 109997413 -10286899 + AT_rich Low_complexity Low_complexity 1 41 0 7 1424 1691 21 0 0 chr13 109997445 109997638 -10286674 + B2_Mm1t SINE B2 1 193 0 7 1424 250 299 65 0 chr13 109997803 109997910 -10286402 + MLT1A1 LTR MaLR 1 114 -294 7 1424 291 362 60 7 chr13 109998764 109998914 -10285398 - MIR SINE MIR -43 219 62 7 1424 228 236 0 18 chr13 110000124 110000180 -10284132 - Cheshire DNA MER1_type 0 2420 2366 1 1424 702 266 104 75 chr13 110000180 110000460 -10283852 + B4 SINE B4 1 288 -4 2 1424 498 75 0 0 chr13 110000492 110000559 -10283753 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 3 1424 444 67 0 0 chr13 110001159 110001219 -10283093 + (TG)n Simple_repeat Simple_repeat 1 60 0 4 1424 224 138 86 0 chr13 110001499 110001557 -10282755 + A-rich Low_complexity Low_complexity 4 66 0 5 1424 187 31 30 30 chr13 110003238 110003271 -10281041 + (CCCA)n Simple_repeat Simple_repeat 1 33 0 6 1424 28 0 0 0 chr13 110003309 110003337 -10280975 + AT_rich Low_complexity Low_complexity 1 28 0 7 1424 239 275 0 0 chr13 110003481 110003550 -10280762 + C-rich Low_complexity Low_complexity 1 69 0 8 1424 387 0 0 0 chr13 110003567 110003610 -10280702 + (CA)n Simple_repeat Simple_repeat 2 44 0 9 1424 780 259 159 13 chr13 110003617 110003933 -10280379 - Lx6 LINE L1 -219 7241 6953 1 1424 717 201 6 30 chr13 110004042 110004137 -10280175 + URR1A DNA MER1_type 62 157 -69 1 1424 1210 55 0 0 chr13 110004137 110004283 -10280029 + B1_Mus1 SINE Alu 2 147 -1 1 1424 717 201 6 30 chr13 110004283 110004356 -10279956 + URR1A DNA MER1_type 158 226 0 1 1424 359 276 60 0 chr13 110004356 110004464 -10279848 + MER2 DNA MER2_type 144 258 -87 1 1424 367 276 88 57 chr13 110005845 110006037 -10278275 + B3A SINE B2 1 198 0 1 1424 550 348 83 43 chr13 110006525 110006615 -10277697 - Lx8 LINE L1 -157 7316 7217 1 1424 384 22 0 0 chr13 110006615 110006660 -10277652 + (TC)n Simple_repeat Simple_repeat 1 45 0 1 1424 550 348 83 43 chr13 110006660 110006906 -10277406 - Lx8 LINE L1 -257 7216 6959 1 1424 4900 69 48 5 chr13 110006906 110007574 -10276738 - L1_Mus3 LINE L1 0 6638 5942 1 1424 550 348 83 43 chr13 110007574 110007680 -10276632 - Lx8 LINE L1 -515 6958 6856 1 1424 210 245 0 20 chr13 110008465 110008515 -10275797 + CT-rich Low_complexity Low_complexity 2 50 0 1 1424 519 17 0 0 chr13 110008600 110008660 -10275652 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1424 319 240 9 9 chr13 110008662 110008767 -10275545 + (CATATA)n Simple_repeat Simple_repeat 6 110 0 2 1424 448 302 55 16 chr13 110008782 110008964 -10275348 - L1MA4 LINE L1 -376 5924 5736 2 1424 492 165 0 0 chr13 110009060 110009151 -10275161 + A-rich Low_complexity Low_complexity 1 91 0 2 1424 234 62 0 0 chr13 110009183 110009215 -10275097 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 2 1424 5735 64 0 10 chr13 110010769 110011482 -10272830 - L1_Mus1 LINE L1 0 6567 5862 2 1424 195 42 0 0 chr13 110011788 110011812 -10272500 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 2 1424 605 286 33 9 chr13 110011827 110012039 -10272273 + RMER1C Other Other 521 737 -605 2 1424 1114 183 119 72 chr13 110012059 110012377 -10271935 - Lx5 LINE L1 0 7050 6718 2 1424 36050 58 3 2 chr13 110012391 110018590 -10265722 - L1Md_F2 LINE L1 -1 6581 374 2 1424 984 51 0 0 chr13 110018594 110018711 -10265601 - L1_Mus1 LINE L1 -689 5878 5762 2 1424 366 68 0 0 chr13 110018709 110018753 -10265559 + L1_Mus1 LINE L1 5834 5877 -690 2 1424 249 108 0 0 chr13 110020808 110020845 -10263467 + (CCCTG)n Simple_repeat Simple_repeat 3 39 0 3 1424 183 139 0 0 chr13 110021353 110021389 -10262923 + (CAA)n Simple_repeat Simple_repeat 2 37 0 3 1424 255 294 11 11 chr13 110021720 110021813 -10262499 - MLT1B LTR MaLR -2 388 296 3 1424 183 391 0 0 chr13 110022930 110023017 -10261295 - MIR SINE MIR -158 104 18 3 1424 229 287 43 0 chr13 110023482 110023576 -10260736 - MLT1B LTR MaLR -217 173 76 3 1424 209 307 13 0 chr13 110024008 110024083 -10260229 + (TG)n Simple_repeat Simple_repeat 1 76 0 3 1424 642 253 127 34 chr13 110024089 110024326 -10259986 - B4A SINE B4 -10 282 24 3 1424 312 27 0 0 chr13 110024444 110024481 -10259831 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 3 1424 227 281 19 50 chr13 110024624 110024834 -10259478 + GA-rich Low_complexity Low_complexity 1 203 0 3 1424 462 88 0 0 chr13 110025094 110025162 -10259150 + (TG)n Simple_repeat Simple_repeat 1 68 0 3 1424 333 188 0 0 chr13 110025233 110025313 -10258999 + (TG)n Simple_repeat Simple_repeat 2 81 0 3 1424 431 335 14 14 chr13 110025778 110025993 -10258319 - LTR82A LTR ERVL -9 863 649 4 1424 28 0 0 0 chr13 110026917 110026945 -10257367 + AT_rich Low_complexity Low_complexity 1 28 0 4 1424 213 273 0 15 chr13 110027106 110027173 -10257139 - PB1D10 SINE Alu -7 110 45 4 1424 347 230 22 22 chr13 110028383 110028472 -10255840 + U2 snRNA snRNA 4 92 -96 4 1424 239 364 0 10 chr13 110028907 110029007 -10255305 + GA-rich Low_complexity Low_complexity 5 103 0 4 1424 282 56 0 0 chr13 110029184 110029220 -10255092 + (T)n Simple_repeat Simple_repeat 1 36 0 4 1424 261 0 0 0 chr13 110029351 110029380 -10254932 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 4 1424 225 0 0 0 chr13 110029749 110029774 -10254538 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1424 395 190 8 33 chr13 110030600 110030720 -10253592 + (TATATG)n Simple_repeat Simple_repeat 4 120 0 4 1424 285 297 0 0 chr13 110031247 110031321 -10252991 - LTR88b LTR Gypsy? -625 212 139 4 1424 22 80 0 0 chr13 110031413 110031463 -10252849 + AT_rich Low_complexity Low_complexity 1 50 0 5 1424 180 267 0 0 chr13 110034091 110034136 -10250176 + L2b LINE L2 3329 3373 -2 5 1424 1264 88 44 0 chr13 110034206 110034388 -10249924 + B2_Mm2 SINE B2 2 191 -4 5 1424 482 104 0 0 chr13 110034394 110034471 -10249841 + BC1_Mm scRNA scRNA 2 78 -74 5 1424 456 19 0 0 chr13 110034471 110034524 -10249788 + (GAAAA)n Simple_repeat Simple_repeat 2 54 0 5 1424 272 217 0 28 chr13 110034547 110034618 -10249694 + B1_Mur1 SINE Alu 74 142 -7 5 1424 323 230 7 21 chr13 110034905 110035047 -10249265 + (TA)n Simple_repeat Simple_repeat 1 140 0 5 1424 1211 168 0 18 chr13 110035160 110035379 -10248933 - Lx4A LINE L1 0 7058 6844 5 1424 351 0 0 0 chr13 110037673 110037712 -10246600 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1424 228 291 12 0 chr13 110038528 110038614 -10245698 - MER3 DNA MER1_type -3 206 120 5 1424 302 0 26 0 chr13 110039184 110039222 -10245090 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1424 2368 176 72 26 chr13 110039542 110040043 -10244269 - RLTR11A2 LTR ERVK 0 527 4 6 1424 995 279 52 63 chr13 110040255 110040583 -10243729 - MTE2b LTR MaLR 0 379 49 6 1424 405 0 0 0 chr13 110040583 110040628 -10243684 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1424 995 279 52 63 chr13 110040628 110040682 -10243630 - MTE2b LTR MaLR -331 48 1 6 1424 378 0 0 0 chr13 110041709 110041751 -10242561 + (TA)n Simple_repeat Simple_repeat 2 43 0 6 1424 673 75 0 0 chr13 110041764 110041857 -10242455 + B2_Mm2 SINE B2 6 98 -97 6 1424 638 88 39 0 chr13 110042630 110042732 -10241580 + B2_Mm2 SINE B2 84 189 -6 6 1424 242 232 0 18 chr13 110042732 110042789 -10241523 - L1MB8 LINE L1 -8 6170 6115 6 1424 748 171 50 0 chr13 110042832 110042972 -10241340 - B1_Mus2 SINE Alu 0 147 1 6 1424 1326 40 6 11 chr13 110044783 110044962 -10239350 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 6 1424 216 0 0 0 chr13 110044962 110044986 -10239326 + (TC)n Simple_repeat Simple_repeat 1 24 0 6 1424 528 16 0 0 chr13 110044986 110045047 -10239265 + (TTCC)n Simple_repeat Simple_repeat 3 63 0 7 1424 330 26 0 0 chr13 110045437 110045476 -10238836 + (GA)n Simple_repeat Simple_repeat 1 39 0 7 1424 594 241 7 14 chr13 110045483 110045622 -10238690 + B3 SINE B2 3 140 -76 7 1424 810 81 0 0 chr13 110045636 110045747 -10238565 + (GGAA)n Simple_repeat Simple_repeat 3 113 0 7 1424 457 234 13 0 chr13 110046457 110046615 -10237697 + (TG)n Simple_repeat Simple_repeat 1 160 0 7 1424 917 278 3 82 chr13 110046615 110046932 -10237380 - B4A SINE B4 0 292 1 7 1424 25 31 0 0 chr13 110048660 110048692 -10235620 + AT_rich Low_complexity Low_complexity 1 32 0 7 1424 240 250 0 0 chr13 110048772 110048852 -10235460 + (TA)n Simple_repeat Simple_repeat 1 80 0 7 1424 180 0 0 0 chr13 110049010 110049030 -10235282 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 7 1424 747 147 5 48 chr13 110050104 110050290 -10234022 + A-rich Low_complexity Low_complexity 3 180 0 7 1424 230 0 33 0 chr13 110051823 110051853 -10232459 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 8 1424 243 0 0 0 chr13 110052469 110052496 -10231816 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 8 1424 334 244 203 15 chr13 110053961 110054038 -10230274 - RLTR20C LTR ERVK -2 549 448 8 1424 438 53 0 0 chr13 110054038 110054095 -10230217 + (CA)n Simple_repeat Simple_repeat 1 57 0 8 1424 922 198 364 48 chr13 110054095 110054443 -10229869 - RLTR20C LTR ERVK -104 447 1 8 1424 297 167 0 0 chr13 110054506 110054560 -10229752 + T-rich Low_complexity Low_complexity 1 54 0 8 1424 180 0 0 0 chr13 110055873 110055893 -10228419 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 8 1424 472 270 36 7 chr13 110055896 110056034 -10228278 - B1F SINE Alu -7 142 1 8 1424 297 0 0 0 chr13 110056343 110056376 -10227936 + (CA)n Simple_repeat Simple_repeat 2 34 0 8 1424 21 0 0 0 chr13 110058768 110058789 -10225523 + AT_rich Low_complexity Low_complexity 1 21 0 8 1424 303 320 19 0 chr13 110060597 110060700 -10223612 - MER113 DNA MER1_type -332 189 85 8 1424 229 321 17 26 chr13 110061190 110061305 -10223007 - MER45A DNA Tip100 -8 170 57 9 1424 887 140 7 13 chr13 110062295 110062447 -10221865 - URR1A DNA MER1_type -3 223 73 9 1424 335 243 14 0 chr13 110062830 110062904 -10221408 - MER20 DNA MER1_type -144 75 1 9 1424 233 381 70 13 chr13 110062996 110063153 -10221159 + MIRc SINE MIR 40 205 -63 9 1424 21 0 0 0 chr13 110063194 110063215 -10221097 + AT_rich Low_complexity Low_complexity 1 21 0 9 1424 196 339 122 16 chr13 110064345 110064468 -10219844 - L2a LINE L2 -1 3425 3290 9 1424 734 351 109 48 chr13 110064528 110065597 -10218715 - L2a LINE L2 -240 3186 2045 9 1424 382 345 65 35 chr13 110065672 110065873 -10218439 + L2 LINE L2 1416 1622 -1797 9 1424 320 343 175 0 chr13 110066041 110066207 -10218105 - MLT1F1 LTR MaLR -184 385 191 9 1424 736 117 54 14 chr13 110066234 110066382 -10217930 + RMER17B LTR ERVK 310 463 -495 9 1424 393 275 32 121 chr13 110066661 110066818 -10217494 + B1F2 SINE Alu 7 149 0 9 1424 240 35 0 0 chr13 110067160 110067189 -10217123 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1424 184 360 47 67 chr13 110067396 110067545 -10216767 - L2a LINE L2 -2760 659 514 9 1424 240 35 0 0 chr13 110067596 110067625 -10216687 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1424 333 0 0 0 chr13 110067626 110067663 -10216649 + (TG)n Simple_repeat Simple_repeat 2 38 0 1 1424 332 217 189 23 chr13 110067673 110067805 -10216507 - B3A SINE B2 -40 155 2 1 1424 236 91 0 22 chr13 110068310 110068355 -10215957 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1 1424 522 0 0 0 chr13 110068415 110068473 -10215839 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1424 350 286 55 39 chr13 110069910 110070092 -10214220 - L1MEf LINE L1 -4108 2092 1908 1 1424 456 155 178 40 chr13 110070425 110070526 -10213786 + B1_Mur4 SINE Alu 36 150 0 1 1424 186 43 0 0 chr13 110070526 110070549 -10213763 + (CAAGA)n Simple_repeat Simple_repeat 1 23 0 1 1424 360 43 0 0 chr13 110071420 110071466 -10212846 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1424 497 285 183 16 chr13 110071564 110071943 -10212369 - MLT1C LTR MaLR -19 486 21 1 1424 1062 68 0 0 chr13 110072102 110072235 -10212077 + B1_Mus1 SINE Alu 3 135 -13 1 1424 183 42 0 0 chr13 110072235 110072259 -10212053 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1 1424 207 0 0 0 chr13 110072279 110072302 -10212010 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1424 232 302 34 34 chr13 110072513 110072602 -10211710 + PB1D10 SINE Alu 20 108 -9 1 1424 1238 301 22 7 chr13 110072690 110073102 -10211210 + Lx7 LINE L1 6884 7301 -395 1 1424 27 0 0 0 chr13 110073323 110073350 -10210962 + AT_rich Low_complexity Low_complexity 1 27 0 1 1424 640 296 10 21 chr13 110073981 110074021 -10210291 - B3A SINE B2 -4 194 155 1 1424 303 28 0 0 chr13 110074021 110074057 -10210255 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1424 640 296 10 21 chr13 110074057 110074209 -10210103 - B3A SINE B2 -44 154 4 1 1424 377 308 50 30 chr13 110074275 110074476 -10209836 - L1MB2 LINE L1 -45 6126 5922 1 1424 636 154 154 0 chr13 110074708 110074825 -10209487 - B1_Mus2 SINE Alu -8 139 5 1 1424 540 271 58 90 chr13 110074830 110075033 -10209279 - L1MB2 LINE L1 -484 5687 5480 1 1424 186 43 0 0 chr13 110075033 110075056 -10209256 + (TCCC)n Simple_repeat Simple_repeat 4 26 0 1 1424 540 271 58 90 chr13 110075056 110075164 -10209148 - L1MB2 LINE L1 -692 5479 5386 1 1424 249 57 0 0 chr13 110075196 110075231 -10209081 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1424 630 12 0 35 chr13 110076925 110077012 -10207300 + L1Md_T LINE L1 6499 6582 0 1 1424 214 371 90 8 chr13 110077143 110077276 -10207036 + MIR3 SINE MIR 59 202 -6 1 1424 475 250 73 16 chr13 110078717 110078898 -10205414 - B3 SINE B2 -1 192 8 1 1424 419 303 31 43 chr13 110079027 110079189 -10205123 - RSINE1 SINE B4 -2 163 4 1 1424 327 49 0 0 chr13 110079561 110079602 -10204710 + (TG)n Simple_repeat Simple_repeat 1 41 0 1 1424 890 298 35 8 chr13 110079628 110079885 -10204427 - B4 SINE B4 -14 278 15 1 1424 360 0 0 0 chr13 110080282 110080322 -10203990 + (GA)n Simple_repeat Simple_repeat 1 40 0 1 1424 459 0 0 0 chr13 110080452 110080503 -10203809 + (TAGA)n Simple_repeat Simple_repeat 2 52 0 1 1424 376 70 56 0 chr13 110080993 110081064 -10203248 + (TTTTG)n Simple_repeat Simple_repeat 2 76 0 1 1424 22 56 0 0 chr13 110081572 110081608 -10202704 + AT_rich Low_complexity Low_complexity 1 36 0 1 1424 267 79 0 0 chr13 110081675 110081713 -10202599 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1424 212 77 0 25 chr13 110083166 110083206 -10201106 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1 1424 28 48 0 0 chr13 110083213 110083255 -10201057 + AT_rich Low_complexity Low_complexity 1 42 0 1 1424 183 80 0 0 chr13 110084854 110084879 -10199433 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1424 386 308 0 11 chr13 110086011 110086103 -10198209 - MLT1J2 LTR MaLR -319 129 39 1 1424 627 14 0 0 chr13 110086843 110086915 -10197397 + (TG)n Simple_repeat Simple_repeat 2 73 0 1 1424 363 311 59 13 chr13 110086991 110087229 -10197083 - L1M5 LINE L1 -376 5797 5549 1 1424 789 237 79 0 chr13 110087941 110088118 -10196194 - B3 SINE B2 -25 191 1 1 1424 197 200 31 0 chr13 110088617 110088682 -10195630 + (TCTCTG)n Simple_repeat Simple_repeat 6 72 0 1 1424 200 175 211 0 chr13 110089367 110089424 -10194888 + MIR SINE MIR 21 89 -173 1 1424 189 339 0 0 chr13 110089423 110089479 -10194833 - MIR SINE MIR -118 144 89 1 1424 294 284 12 0 chr13 110090456 110090537 -10193775 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 1424 581 129 24 0 chr13 110090643 110090728 -10193584 - B1_Mur1 SINE Alu -1 148 62 1 1424 236 282 34 45 chr13 110091175 110091264 -10193048 - MLT1C LTR MaLR -32 435 348 1 1424 249 295 51 31 chr13 110092591 110092689 -10191623 - MIRc SINE MIR -114 154 55 1 1424 189 0 0 0 chr13 110093434 110093455 -10190857 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 1 1424 371 326 8 6 chr13 110095747 110095894 -10188418 + MIR SINE MIR 121 262 -6 1 1424 246 275 48 125 chr13 110096793 110096897 -10187415 + PB1D10 SINE Alu 21 116 -1 1 1424 256 83 0 27 chr13 110097230 110097267 -10187045 + U2 snRNA snRNA 1 36 -152 1 1424 2014 214 86 56 chr13 110097419 110097977 -10186335 - RMER15 LTR ERVL 0 575 1 1 1424 641 313 111 23 chr13 110098271 110098624 -10185688 + MER63B DNA AcHobo 34 417 -19 1 1424 779 299 49 80 chr13 110098948 110099290 -10185022 - L1MA4 LINE L1 -370 5930 5608 1 1424 908 242 28 19 chr13 110099290 110099501 -10184811 - B3 SINE B2 -2 214 2 1 1424 779 299 49 80 chr13 110099501 110099849 -10184463 - L1MA4 LINE L1 -693 5607 5261 1 1425 21 36 0 0 chr13 110101356 110101384 -10182928 + AT_rich Low_complexity Low_complexity 1 28 0 1 1425 1327 269 68 3 chr13 110104927 110105281 -10179031 - MTEa LTR MaLR -2 377 1 1 1425 3577 93 2 40 chr13 110106154 110106682 -10177630 + L1_Mus2 LINE L1 6059 6566 0 1 1425 1333 81 0 36 chr13 110108291 110108484 -10175828 - B2_Mm2 SINE B2 -8 187 2 1 1425 261 329 0 14 chr13 110108579 110108653 -10175659 - ID4 SINE ID -4 79 7 1 1425 369 0 0 0 chr13 110108828 110108869 -10175443 + (CA)n Simple_repeat Simple_repeat 1 41 0 1 1425 245 406 58 16 chr13 110110187 110110500 -10173812 - LTR82B Low_complexity ERVL -17 813 488 1 1425 255 353 91 51 chr13 110111306 110111503 -10172809 - MER58A DNA MER1_type -19 205 1 1 1425 3339 33 0 0 chr13 110112795 110113188 -10171124 + L1Md_T LINE L1 6189 6581 -1 1 1425 240 186 0 0 chr13 110114736 110114779 -10169533 + CT-rich Low_complexity Low_complexity 1 43 0 1 1425 269 241 0 0 chr13 110114929 110114983 -10169329 - L3 LINE CR1 -1010 3479 3426 1 1425 21 0 0 0 chr13 110115241 110115262 -10169050 + AT_rich Low_complexity Low_complexity 1 21 0 1 1425 769 293 33 9 chr13 110115497 110115707 -10168605 + ID_B1 SINE B4 10 224 0 1 1425 550 155 0 17 chr13 110117741 110117859 -10166453 + CT-rich Low_complexity Low_complexity 3 118 0 1 1425 346 245 19 47 chr13 110117868 110117975 -10166337 - PB1D10 SINE Alu -13 104 1 1 1425 212 0 36 0 chr13 110119337 110119365 -10164947 + (TC)n Simple_repeat Simple_repeat 2 30 0 1 1425 207 108 27 0 chr13 110119612 110119649 -10164663 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 1 1425 22 0 0 0 chr13 110120006 110120028 -10164284 + AT_rich Low_complexity Low_complexity 1 22 0 1 1425 322 147 29 0 chr13 110120316 110120384 -10163928 + (TA)n Simple_repeat Simple_repeat 2 71 0 1 1425 439 337 52 63 chr13 110120560 110120829 -10163483 + B4 SINE B4 6 271 -21 1 1425 209 393 0 0 chr13 110120830 110120919 -10163393 + (CATG)n Simple_repeat Simple_repeat 2 90 0 1 1425 434 258 180 24 chr13 110121229 110121396 -10162916 - ORR1D2 LTR MaLR -9 361 169 1 1425 185 94 31 0 chr13 110121398 110121430 -10162882 + (GGGAGA)n Simple_repeat Simple_repeat 3 35 0 1 1425 599 304 32 55 chr13 110121773 110121992 -10162320 - B3A SINE B2 0 216 3 1 1425 202 135 38 19 chr13 110122587 110122640 -10161672 + (CATG)n Simple_repeat Simple_repeat 3 56 0 1 1425 459 0 0 0 chr13 110122691 110122742 -10161570 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1425 246 176 39 0 chr13 110123057 110123108 -10161204 - L2a LINE L2 -1 3425 3373 1 1425 23 0 0 0 chr13 110123146 110123169 -10161143 + AT_rich Low_complexity Low_complexity 1 23 0 1 1425 196 339 87 16 chr13 110123317 110123443 -10160869 + MIRb SINE MIR 134 268 0 1 1425 258 56 0 0 chr13 110123980 110124016 -10160296 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1 1425 308 275 154 12 chr13 110124314 110124476 -10159836 + L3b LINE CR1 191 375 -107 1 1425 387 0 0 0 chr13 110125304 110125347 -10158965 + (GA)n Simple_repeat Simple_repeat 1 43 0 1 1425 318 50 0 0 chr13 110125347 110125386 -10158926 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 1 1425 308 200 33 0 chr13 110126325 110126385 -10157927 - ID4_ SINE ID -17 66 5 1 1425 254 282 31 100 chr13 110128795 110128925 -10155387 - Tigger10 DNA Tigger -1498 345 225 1 1425 2219 83 75 32 chr13 110129058 110129406 -10154906 - L1Md_F2 LINE L1 -1 6581 6219 1 1425 5598 60 0 0 chr13 110129406 110130166 -10154146 + L1_Mm LINE L1 3525 4284 -1599 1 1425 25 0 0 0 chr13 110131787 110131812 -10152500 + AT_rich Low_complexity Low_complexity 1 25 0 1 1425 884 301 85 28 chr13 110132158 110132592 -10151720 + Lx8 LINE L1 6840 7298 -175 1 1425 3045 76 2 2 chr13 110134175 110134571 -10149741 + MTA_Mm LTR MaLR 1 396 0 1 1425 317 325 110 114 chr13 110136077 110136341 -10147971 - B4A SINE B4 0 292 30 1 1425 23 33 0 0 chr13 110136457 110136487 -10147825 + AT_rich Low_complexity Low_complexity 1 30 0 1 1425 674 290 43 0 chr13 110136625 110136787 -10147525 + B3A SINE B2 3 171 -27 1 1425 209 318 0 0 chr13 110136804 110136867 -10147445 + (CA)n Simple_repeat Simple_repeat 2 64 0 1 1425 1566 177 58 34 chr13 110139138 110139634 -10144678 + RMER17C LTR ERVK 16 439 -519 1 1425 260 65 0 42 chr13 110140820 110140868 -10143444 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 2 1425 582 364 60 10 chr13 110141196 110141496 -10142816 - MLT1A0 LTR MaLR -20 345 31 2 1425 261 0 0 0 chr13 110141849 110141878 -10142434 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1425 684 234 0 0 chr13 110142380 110142547 -10141765 + CT-rich Low_complexity Low_complexity 4 170 0 2 1425 276 100 0 0 chr13 110142566 110142606 -10141706 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1425 207 0 0 0 chr13 110142700 110142723 -10141589 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1425 257 338 27 0 chr13 110142747 110142821 -10141491 + ID4_ SINE ID 2 77 -6 2 1425 351 0 0 0 chr13 110143216 110143255 -10141057 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2 1425 762 266 11 5 chr13 110143438 110143623 -10140689 + B3A SINE B2 2 187 -11 2 1425 26 0 0 0 chr13 110145035 110145061 -10139251 + AT_rich Low_complexity Low_complexity 1 26 0 2 1425 2902 12 0 0 chr13 110145143 110145471 -10138841 - L1Md_T LINE L1 0 6582 6255 2 1425 26 0 0 0 chr13 110146150 110146176 -10138136 + AT_rich Low_complexity Low_complexity 1 26 0 2 1425 189 171 0 0 chr13 110148486 110148521 -10135791 + GA-rich Low_complexity Low_complexity 1 35 0 2 1425 249 33 0 0 chr13 110148521 110148551 -10135761 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1425 189 0 0 0 chr13 110148551 110148571 -10135741 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 1425 23 0 0 0 chr13 110149155 110149178 -10135134 + AT_rich Low_complexity Low_complexity 1 23 0 2 1425 555 16 0 0 chr13 110150531 110150595 -10133717 + (TCCC)n Simple_repeat Simple_repeat 2 65 0 2 1425 234 0 0 0 chr13 110150595 110150620 -10133692 + (TTTC)n Simple_repeat Simple_repeat 4 29 0 2 1425 1323 122 0 32 chr13 110150621 110150841 -10133471 - Lx3A LINE L1 -16 6965 6753 2 1425 3392 72 25 0 chr13 110150841 110151267 -10133045 - L1_Mur1 LINE L1 -176 5710 5273 2 1425 221 0 0 33 chr13 110151267 110151297 -10133015 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1425 3392 72 25 0 chr13 110151297 110151345 -10132967 - L1_Mur1 LINE L1 -614 5272 5225 2 1425 192 77 0 0 chr13 110151411 110151437 -10132875 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 2 1425 230 273 28 44 chr13 110151473 110151653 -10132659 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 2 1425 423 262 109 49 chr13 110152437 110152702 -10131610 + L1MB8 LINE L1 5584 5864 -314 2 1425 200 209 70 0 chr13 110154894 110154937 -10129375 + L3 LINE CR1 827 872 -3617 2 1425 36269 29 0 1 chr13 110156392 110163087 -10121225 - L1Md_T LINE L1 0 6585 1 2 1425 21 0 0 0 chr13 110163496 110163517 -10120795 + AT_rich Low_complexity Low_complexity 1 21 0 2 1425 23 33 0 0 chr13 110163572 110163602 -10120710 + AT_rich Low_complexity Low_complexity 1 30 0 2 1425 297 109 0 0 chr13 110164931 110164977 -10119335 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1425 2958 311 62 13 chr13 110165057 110166311 -10118001 - Lx8 LINE L1 -31 7442 6127 2 1425 569 265 81 93 chr13 110166423 110166744 -10117568 - Arthur1 DNA Tip100 -212 3735 3419 2 1425 449 350 184 25 chr13 110166729 110167174 -10117138 - Arthur1 DNA Tip100 -3379 568 53 2 1425 1799 317 81 48 chr13 110167622 110168364 -10115948 + Lx8 LINE L1 6101 6872 -601 2 1425 3020 146 36 13 chr13 110168364 110168890 -10115422 + Lx LINE L1 6117 6654 0 2 1425 1799 317 81 48 chr13 110168890 110169388 -10114924 + Lx8 LINE L1 6873 7381 -92 2 1425 488 259 17 0 chr13 110169650 110169766 -10114546 - RLTR14 LTR ERV1 -19 363 246 2 1425 718 175 7 7 chr13 110169758 110169902 -10114410 - RLTR14 LTR ERV1 -238 144 1 2 1425 408 40 0 0 chr13 110170167 110170217 -10114095 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1425 542 133 20 0 chr13 110170837 110170935 -10113377 + (CATATA)n Simple_repeat Simple_repeat 3 102 0 2 1425 260 27 27 0 chr13 110171602 110171639 -10112673 + (CA)n Simple_repeat Simple_repeat 2 39 0 2 1425 594 0 0 0 chr13 110171639 110171704 -10112608 + (TC)n Simple_repeat Simple_repeat 2 67 0 2 1425 240 35 0 0 chr13 110171704 110171732 -10112580 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1425 323 323 146 31 chr13 110171765 110171957 -10112355 - L1MEc LINE L1 -6076 324 111 2 1425 806 170 263 0 chr13 110172213 110172384 -10111928 + B3 SINE B2 1 216 0 2 1425 21 71 0 0 chr13 110172449 110172491 -10111821 + AT_rich Low_complexity Low_complexity 1 42 0 2 1425 234 150 0 0 chr13 110172578 110172618 -10111694 + (TG)n Simple_repeat Simple_repeat 1 40 0 2 1425 761 283 5 30 chr13 110173092 110173289 -10111023 - B3A SINE B2 0 198 7 2 1425 266 287 65 8 chr13 110173542 110173665 -10110647 + L1MA10 LINE L1 6190 6319 -15 2 1425 216 0 0 0 chr13 110174190 110174214 -10110098 + (TC)n Simple_repeat Simple_repeat 1 24 0 2 1425 261 0 0 0 chr13 110174214 110174242 -10110070 + (CA)n Simple_repeat Simple_repeat 1 29 0 2 1425 600 14 0 0 chr13 110175059 110175128 -10109184 + (GA)n Simple_repeat Simple_repeat 2 70 0 2 1425 269 293 22 43 chr13 110175881 110176020 -10108292 + B1F1 SINE Alu 1 136 -13 2 1425 377 236 28 0 chr13 110176106 110176178 -10108134 - B1F SINE Alu -75 74 1 2 1425 351 0 0 0 chr13 110176522 110176561 -10107751 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1425 180 111 0 0 chr13 110176620 110176647 -10107665 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1425 936 219 9 50 chr13 110176849 110177070 -10107242 - B3 SINE B2 -3 213 2 2 1425 202 280 0 0 chr13 110177074 110177124 -10107188 + CT-rich Low_complexity Low_complexity 2 51 0 2 1425 592 291 77 43 chr13 110177588 110177796 -10106516 + B4A SINE B4 1 215 -77 2 1425 218 244 51 13 chr13 110178023 110178102 -10106210 + (CATATA)n Simple_repeat Simple_repeat 6 87 0 2 1425 221 274 27 0 chr13 110178773 110178846 -10105466 + (TAGA)n Simple_repeat Simple_repeat 1 75 0 2 1425 347 261 26 26 chr13 110179063 110179177 -10105135 + Tigger5 DNA MER2_type 2291 2404 -2 2 1425 336 119 0 0 chr13 110179751 110179810 -10104502 + (TG)n Simple_repeat Simple_repeat 2 60 0 2 1425 549 236 41 38 chr13 110179845 110180015 -10104297 - MTD LTR MaLR -15 404 190 2 1425 383 327 54 91 chr13 110180075 110180317 -10103995 - MTD LTR MaLR -186 233 1 2 1425 181 246 122 14 chr13 110180525 110180599 -10103713 + MIRb SINE MIR 2 83 -185 2 1425 297 128 0 0 chr13 110180665 110180712 -10103600 + (TCCC)n Simple_repeat Simple_repeat 4 50 0 2 1425 12684 195 185 35 chr13 110180731 110181073 -10103239 - Lx6 LINE L1 -6 7454 7036 2 1425 573 64 0 5 chr13 110181073 110181155 -10103157 - B1_Mus2 SINE Alu 0 147 42 2 1425 12684 195 185 35 chr13 110181155 110184237 -10100075 - Lx6 LINE L1 -6 7035 3250 2 1425 180 0 0 0 chr13 110184237 110184257 -10100055 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2 1425 12684 188 226 17 chr13 110184257 110186712 -10097600 - Lx6 LINE L1 -2631 3249 475 2 1425 367 327 55 31 chr13 110186758 110186982 -10097330 - MLT1C LTR MaLR -164 226 2 2 1425 224 288 191 39 chr13 110186982 110187239 -10097073 + L2a LINE L2 3122 3417 -9 2 1425 22 56 0 0 chr13 110187661 110187697 -10096615 + AT_rich Low_complexity Low_complexity 1 36 0 2 1425 1800 122 141 55 chr13 110187858 110188206 -10096106 + ORR1C1 LTR MaLR 1 378 0 2 1425 767 249 104 77 chr13 110188718 110189084 -10095228 + MTEa LTR MaLR 2 377 -2 2 1425 223 154 0 0 chr13 110190160 110190199 -10094113 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1425 204 111 0 0 chr13 110190335 110190371 -10093941 + (A)n Simple_repeat Simple_repeat 1 36 0 2 1425 2540 84 87 0 chr13 110190549 110190917 -10093395 - MTB LTR MaLR 0 400 1 2 1425 209 232 14 0 chr13 110191101 110191170 -10093142 + (TG)n Simple_repeat Simple_repeat 1 70 0 2 1425 220 372 136 22 chr13 110191216 110191400 -10092912 - B4A SINE B4 -14 278 74 2 1425 692 107 9 0 chr13 110191460 110191572 -10092740 + (TC)n Simple_repeat Simple_repeat 2 114 0 2 1425 356 379 82 42 chr13 110191648 110192028 -10092284 - MLT1E3 LTR MaLR -9 615 221 2 1425 226 283 249 53 chr13 110192224 110192545 -10091767 - Lx8 LINE L1 -3 7470 7087 2 1425 486 0 0 0 chr13 110193451 110193505 -10090807 + (TC)n Simple_repeat Simple_repeat 1 54 0 2 1425 297 0 0 0 chr13 110193505 110193537 -10090775 + (CA)n Simple_repeat Simple_repeat 1 33 0 2 1425 291 190 0 0 chr13 110193986 110194044 -10090268 + CT-rich Low_complexity Low_complexity 4 61 0 2 1425 1019 38 15 0 chr13 110194209 110194340 -10089972 + (TTCC)n Simple_repeat Simple_repeat 4 136 0 2 1425 732 177 8 15 chr13 110194349 110194481 -10089831 - B1_Mus1 SINE Alu -17 131 1 2 1425 681 13 0 0 chr13 110194647 110194725 -10089587 + (GAAA)n Simple_repeat Simple_repeat 3 80 0 2 1425 349 295 0 18 chr13 110196223 110196337 -10087975 + PB1D10 SINE Alu 5 116 -1 2 1425 307 0 47 0 chr13 110196454 110196497 -10087815 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 2 1425 284 314 0 83 chr13 110197892 110198024 -10086288 - ID_B1 SINE B4 -85 139 19 2 1425 405 0 0 0 chr13 110198108 110198153 -10086159 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1425 1056 98 0 0 chr13 110198153 110198325 -10085987 + (GA)n Simple_repeat Simple_repeat 2 174 0 2 1425 306 0 0 0 chr13 110199143 110199177 -10085135 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1425 411 266 94 72 chr13 110199260 110199483 -10084829 - MLT1C LTR MaLR -239 228 1 2 1425 1415 147 4 0 chr13 110199723 110199948 -10084364 - URR1A DNA MER1_type 0 226 1 2 1425 33814 35 0 0 chr13 110200164 110205583 -10078729 + L1Md_T LINE L1 74 5589 -297 2 1425 8988 8 0 0 chr13 110205583 110206579 -10077733 + L1Md_T LINE L1 5590 6585 0 2 1425 311 346 56 6 chr13 110207626 110207806 -10076506 + MER121 Unknown Unknown 136 324 -88 2 1425 207 0 0 0 chr13 110207932 110207955 -10076357 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1425 515 312 68 0 chr13 110208185 110208361 -10075951 + B3A SINE B2 3 190 -8 2 1425 1568 222 32 9 chr13 110209319 110209660 -10074652 + ORR1D1 LTR MaLR 26 374 0 2 1425 197 266 60 45 chr13 110210269 110210336 -10073976 + L2a LINE L2 3359 3426 0 2 1425 25 31 0 0 chr13 110210368 110210400 -10073912 + AT_rich Low_complexity Low_complexity 1 32 0 2 1425 22 0 0 0 chr13 110210411 110210433 -10073879 + AT_rich Low_complexity Low_complexity 1 22 0 2 1425 921 153 189 5 chr13 110211353 110211543 -10072769 + URR1B DNA MER1_type 1 225 0 3 1425 339 284 27 9 chr13 110211553 110211663 -10072649 + MLT1A0 LTR MaLR 38 149 -216 3 1425 1530 222 70 6 chr13 110211677 110212021 -10072291 + ORR1D1 LTR MaLR 1 366 -8 3 1425 420 311 16 68 chr13 110212040 110212230 -10072082 + MLT1A0 LTR MaLR 186 365 0 3 1425 288 392 83 16 chr13 110213005 110213259 -10071053 - MLT1I LTR MaLR -17 394 124 3 1425 277 266 38 0 chr13 110213259 110213338 -10070974 + CT-rich Low_complexity Low_complexity 2 83 0 3 1425 233 372 69 0 chr13 110213408 110213510 -10070802 - MLT1I LTR MaLR -270 141 33 3 1425 549 0 0 0 chr13 110214199 110214260 -10070052 + (TA)n Simple_repeat Simple_repeat 2 62 0 3 1425 234 0 0 0 chr13 110214787 110214813 -10069499 + (A)n Simple_repeat Simple_repeat 1 26 0 3 1425 213 121 0 0 chr13 110215109 110215142 -10069170 + (A)n Simple_repeat Simple_repeat 1 33 0 3 1425 216 0 0 0 chr13 110216745 110216769 -10067543 + (TA)n Simple_repeat Simple_repeat 2 25 0 3 1425 252 200 0 0 chr13 110217526 110217581 -10066731 + (CATATA)n Simple_repeat Simple_repeat 2 56 0 3 1425 201 178 0 0 chr13 110222182 110222227 -10062085 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1425 640 238 79 0 chr13 110222556 110222678 -10061634 + B1_Mur3 SINE Alu 2 133 -16 3 1425 1699 166 7 11 chr13 110222678 110222965 -10061347 - MTC LTR MaLR 0 421 136 3 1425 313 185 0 0 chr13 110223163 110223217 -10061095 - B3A SINE B2 -144 54 1 3 1425 269 86 0 67 chr13 110223943 110224018 -10060294 + (GTTTG)n Simple_repeat Simple_repeat 5 74 0 3 1425 863 128 0 0 chr13 110224023 110224148 -10060164 - B1_Mur4 SINE Alu -20 130 6 3 1425 393 280 101 40 chr13 110224047 110224196 -10060116 - B4 SINE B4 -98 194 37 3 1425 284 302 8 147 chr13 110224334 110224586 -10059726 - Lx8 LINE L1 -3 7470 7254 3 1425 1558 271 88 39 chr13 110224703 110225297 -10059015 - Lx8 LINE L1 -504 6969 6347 3 1425 213 211 0 40 chr13 110225327 110225401 -10058911 + (TATAA)n Simple_repeat Simple_repeat 5 75 0 3 1425 302 123 0 17 chr13 110226018 110226076 -10058236 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1425 36 70 0 0 chr13 110226186 110226257 -10058055 + AT_rich Low_complexity Low_complexity 1 71 0 3 1425 375 218 0 21 chr13 110227037 110227169 -10057143 + (TA)n Simple_repeat Simple_repeat 1 130 0 3 1425 375 23 0 0 chr13 110227169 110227213 -10057099 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1425 375 218 0 21 chr13 110227213 110227225 -10057087 + (TA)n Simple_repeat Simple_repeat 1 12 0 3 1425 806 97 61 20 chr13 110227321 110227468 -10056844 + Lx LINE L1 6501 6653 -1 3 1425 267 103 0 0 chr13 110229309 110229348 -10054964 + (TTG)n Simple_repeat Simple_repeat 1 39 0 3 1425 254 359 48 0 chr13 110229761 110229906 -10054406 + MIR SINE MIR 80 231 -31 3 1426 198 0 0 0 chr13 110231612 110231634 -10052678 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1426 186 43 0 0 chr13 110234940 110234963 -10049349 + (GA)n Simple_repeat Simple_repeat 2 24 0 3 1426 213 121 0 0 chr13 110235603 110235636 -10048676 + (CATA)n Simple_repeat Simple_repeat 3 35 0 3 1426 196 111 44 0 chr13 110237056 110237101 -10047211 + GA-rich Low_complexity Low_complexity 2 48 0 3 1426 521 187 16 0 chr13 110237636 110237759 -10046553 + (TATG)n Simple_repeat Simple_repeat 2 126 0 3 1426 881 287 37 29 chr13 110237960 110238204 -10046108 - B4A SINE B4 -44 248 3 3 1426 315 0 0 0 chr13 110239384 110239419 -10044893 + (TG)n Simple_repeat Simple_repeat 2 36 0 3 1426 216 111 0 0 chr13 110239500 110239536 -10044776 + (CAAT)n Simple_repeat Simple_repeat 4 39 0 3 1426 442 295 95 58 chr13 110241264 110241314 -10042998 - RSINE1 SINE B4 -19 146 97 3 1426 3168 150 111 21 chr13 110241314 110241946 -10042366 - RMER6C LTR ERVK 0 690 2 3 1426 442 295 95 58 chr13 110241946 110242032 -10042280 - RSINE1 SINE B4 -69 96 5 3 1426 401 391 44 44 chr13 110243546 110243819 -10040493 - LTR16E1 LTR ERVL -11 527 255 3 1426 629 309 12 43 chr13 110244684 110244721 -10039591 - Lx8 LINE L1 -249 7224 7188 3 1426 1877 173 55 30 chr13 110244721 110244918 -10039394 - ORR1D1 LTR MaLR 0 374 177 3 1426 396 0 0 0 chr13 110244918 110244962 -10039350 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1426 1877 173 55 30 chr13 110244962 110245127 -10039185 - ORR1D1 LTR MaLR -198 176 3 3 1426 629 309 12 43 chr13 110245127 110245346 -10038966 - Lx8 LINE L1 -286 7187 6976 3 1426 405 351 29 6 chr13 110245956 110246131 -10038181 - Lx8 LINE L1 -212 7261 7083 3 1426 414 0 0 0 chr13 110246226 110246272 -10038040 + (TG)n Simple_repeat Simple_repeat 1 46 0 3 1426 465 245 43 0 chr13 110246274 110246368 -10037944 - B1_Mur2 SINE Alu -8 141 44 3 1426 219 65 43 21 chr13 110247336 110247383 -10036929 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1426 29 0 0 0 chr13 110247850 110247879 -10036433 + AT_rich Low_complexity Low_complexity 1 29 0 3 1426 271 369 0 0 chr13 110248430 110248533 -10035779 + L3 LINE CR1 3900 4002 -487 3 1426 198 143 0 0 chr13 110249534 110249569 -10034743 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1426 673 271 17 78 chr13 110249573 110249805 -10034507 - Lx8 LINE L1 -148 7325 7108 3 1426 315 261 64 67 chr13 110249871 110250138 -10034174 - L1MC3 LINE L1 -140 7645 7380 3 1426 330 296 99 60 chr13 110250173 110250525 -10033787 - L1MC3 LINE L1 -506 7279 6914 3 1426 406 316 122 37 chr13 110250537 110250865 -10033447 + MTEa LTR MaLR 12 367 -12 3 1426 366 335 29 10 chr13 110251036 110251244 -10033068 - L1MC3 LINE L1 -997 6788 6577 3 1426 1391 94 5 0 chr13 110251599 110251791 -10032521 - B2_Mm1t SINE B2 0 193 1 3 1426 266 333 55 37 chr13 110252961 110253070 -10031242 - L2b LINE L2 -195 3180 3070 3 1426 222 37 0 0 chr13 110253331 110253358 -10030954 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1426 34 24 0 0 chr13 110253358 110253399 -10030913 + AT_rich Low_complexity Low_complexity 1 41 0 3 1426 183 80 0 0 chr13 110254028 110254053 -10030259 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1426 1170 216 8 132 chr13 110254168 110254525 -10029787 - RMER19C LTR ERVK 0 611 299 3 1426 11162 60 9 7 chr13 110254588 110256798 -10027514 - L1Md_F2 LINE L1 0 6582 4368 3 1426 1365 225 16 96 chr13 110256805 110257208 -10027104 - RMER19C LTR ERVK -388 349 1 3 1426 374 0 22 0 chr13 110257835 110257881 -10026431 + (CTCA)n Simple_repeat Simple_repeat 1 47 0 3 1426 524 358 37 8 chr13 110258188 110258430 -10025882 + MIR SINE MIR 14 262 0 3 1426 9139 56 1 0 chr13 110259641 110260860 -10023452 + L1_Mm LINE L1 3434 4653 -1230 3 1426 995 153 144 30 chr13 110261429 110261631 -10022681 - URR1A DNA MER1_type -1 225 1 3 1426 627 333 53 18 chr13 110263251 110263532 -10020780 - B4A SINE B4 -1 291 1 3 1426 383 284 16 49 chr13 110263687 110263809 -10020503 + L2a LINE L2 3295 3412 -14 3 1426 624 70 0 0 chr13 110264939 110265025 -10019287 + (TTCC)n Simple_repeat Simple_repeat 1 86 0 3 1426 1284 214 141 64 chr13 110266428 110266817 -10017495 + MTD LTR MaLR 1 419 0 3 1426 317 351 77 18 chr13 110267030 110267198 -10017114 + MIRb SINE MIR 83 260 -8 3 1426 588 266 50 56 chr13 110268438 110268617 -10015695 + B3A SINE B2 21 198 0 3 1426 641 298 53 37 chr13 110268750 110268994 -10015318 + B4A SINE B4 9 256 -36 3 1426 804 96 11 38 chr13 110269058 110269242 -10015070 + (CA)n Simple_repeat Simple_repeat 2 180 0 3 1426 1153 88 0 0 chr13 110270154 110270301 -10014011 + B1_Mus2 SINE Alu 1 147 0 3 1426 321 229 14 0 chr13 110270553 110270633 -10013679 + PB1D7 SINE Alu 2 85 -32 3 1426 391 183 0 58 chr13 110270684 110270771 -10013541 + HAL1-3A_ME LINE L1 1976 2057 -801 3 1426 411 135 31 0 chr13 110271032 110271128 -10013184 + (TG)n Simple_repeat Simple_repeat 2 100 0 3 1426 351 0 0 0 chr13 110271549 110271588 -10012724 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1426 195 42 0 0 chr13 110272374 110272398 -10011914 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 3 1426 254 351 5 132 chr13 110272559 110272756 -10011556 - MLT1K LTR MaLR -14 581 410 3 1426 22 70 0 0 chr13 110273840 110273883 -10010429 + AT_rich Low_complexity Low_complexity 1 43 0 3 1426 633 254 83 26 chr13 110273888 110274118 -10010194 - Lx8 LINE L1 -16 7457 7215 3 1426 198 0 0 0 chr13 110274839 110274861 -10009451 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1426 369 0 0 0 chr13 110279733 110279774 -10004538 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 3 1426 243 0 0 0 chr13 110279880 110279907 -10004405 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1426 942 145 0 7 chr13 110279907 110280046 -10004266 - B1_Mur4 SINE Alu -9 141 4 3 1426 339 325 30 35 chr13 110281070 110281239 -10003073 + MER5A DNA MER1_type 22 189 0 3 1426 562 298 36 40 chr13 110281746 110281970 -10002342 + B4A SINE B4 2 224 -68 3 1426 378 0 0 0 chr13 110282506 110282548 -10001764 + (TTCA)n Simple_repeat Simple_repeat 1 42 0 3 1426 22 0 0 0 chr13 110283796 110283818 -10000494 + AT_rich Low_complexity Low_complexity 1 22 0 3 1426 462 108 0 0 chr13 110283842 110283916 -10000396 + (TA)n Simple_repeat Simple_repeat 1 74 0 3 1426 279 358 21 10 chr13 110284302 110284398 -9999914 + MER5B DNA MER1_type 31 127 -51 3 1426 243 0 0 0 chr13 110286234 110286261 -9998051 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3 1426 3140 256 138 25 chr13 110286306 110287621 -9996691 - Lx9 LINE L1 -594 7050 5587 3 1426 537 252 21 7 chr13 110288455 110288599 -9995713 + MER5A1 DNA MER1_type 3 148 -18 3 1426 271 297 0 0 chr13 110289345 110289409 -9994903 + CT-rich Low_complexity Low_complexity 3 66 0 3 1426 285 333 37 82 chr13 110289948 110290082 -9994230 - B1F1 SINE Alu -19 130 3 3 1426 318 269 104 69 chr13 110290409 110290553 -9993759 - RSINE1 SINE B4 -11 154 6 3 1426 213 82 61 0 chr13 110290994 110291043 -9993269 + (TTTC)n Simple_repeat Simple_repeat 2 53 0 3 1426 821 256 90 20 chr13 110292048 110292347 -9991965 - RMER5 LTR ERV1 -96 438 119 3 1426 336 324 9 53 chr13 110293422 110293536 -9990776 - PB1D7 SINE Alu 0 120 12 3 1426 453 145 0 0 chr13 110294204 110294280 -9990032 + (GA)n Simple_repeat Simple_repeat 2 77 0 3 1426 1078 132 63 19 chr13 110294796 110295017 -9989295 - B2_Mm2 SINE B2 -2 214 1 4 1426 1401 63 5 16 chr13 110295021 110295213 -9989099 - B2_Mm2 SINE B2 -5 190 1 4 1426 449 295 19 0 chr13 110295486 110295591 -9988721 + RSINE1 SINE B4 9 115 -50 4 1426 250 298 0 0 chr13 110295593 110295650 -9988662 + RSINE1 SINE B4 89 145 -20 4 1426 316 347 20 20 chr13 110296805 110296955 -9987357 + L2a LINE L2 3264 3413 -13 4 1426 377 310 18 37 chr13 110297139 110297303 -9987009 + MER113 DNA MER1_type 234 394 -127 4 1426 865 148 0 22 chr13 110297882 110298020 -9986292 + B1_Mur3 SINE Alu 1 135 -14 4 1426 207 69 0 0 chr13 110298026 110298055 -9986257 + (CAA)n Simple_repeat Simple_repeat 2 30 0 4 1426 896 280 45 37 chr13 110298402 110298647 -9985665 + B4A SINE B4 46 292 0 4 1426 254 29 29 0 chr13 110298659 110298694 -9985618 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1426 212 59 29 0 chr13 110298699 110298733 -9985579 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 4 1426 183 333 50 25 chr13 110298926 110299006 -9985306 - MIRb SINE MIR -130 138 57 4 1426 21 0 0 0 chr13 110299284 110299305 -9985007 + AT_rich Low_complexity Low_complexity 1 21 0 4 1426 316 143 0 82 chr13 110299311 110299372 -9984940 - B1_Mur3 SINE Alu -1 148 93 4 1426 1680 189 45 25 chr13 110299382 110299778 -9984534 - RMER1A Other Other -20 1010 607 4 1426 888 166 0 0 chr13 110299919 110300082 -9984230 + CT-rich Low_complexity Low_complexity 2 164 0 4 1426 260 314 113 9 chr13 110300408 110300514 -9983798 - MER5A1 DNA MER1_type -7 159 43 4 1426 680 194 37 55 chr13 110300804 110301022 -9983290 + Lx9 LINE L1 7429 7642 -2 4 1426 404 307 43 28 chr13 110301047 110301258 -9983054 - Lx8 LINE L1 -830 6643 6430 4 1426 231 362 62 8 chr13 110301671 110301799 -9982513 - MIR SINE MIR -73 189 55 4 1426 315 0 0 0 chr13 110301891 110301926 -9982386 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1426 971 41 59 0 chr13 110302494 110302664 -9981648 + (GGTTG)n Simple_repeat Simple_repeat 1 180 0 4 1426 1143 108 0 0 chr13 110304172 110304471 -9979841 + (CA)n Simple_repeat Simple_repeat 1 299 0 4 1426 912 180 0 0 chr13 110304575 110304927 -9979385 + (TG)n Simple_repeat Simple_repeat 1 352 0 4 1426 369 231 0 0 chr13 110304939 110305060 -9979252 + (TG)n Simple_repeat Simple_repeat 2 122 0 4 1426 316 325 52 17 chr13 110305166 110305282 -9979030 - B4 SINE B4 -69 223 104 4 1426 24 0 0 0 chr13 110306528 110306552 -9977760 + AT_rich Low_complexity Low_complexity 1 24 0 4 1426 183 42 0 0 chr13 110307675 110307699 -9976613 + (TG)n Simple_repeat Simple_repeat 2 25 0 4 1426 189 0 0 0 chr13 110308240 110308261 -9976051 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 4 1426 688 301 66 30 chr13 110308374 110308740 -9975572 - MTE2b LTR MaLR 0 379 1 4 1426 247 341 39 17 chr13 110309004 110309183 -9975129 - L1ME3A LINE L1 -36 6137 5955 4 1426 281 284 18 9 chr13 110309304 110309414 -9974898 - L1ME3A LINE L1 -449 5791 5681 4 1426 441 0 0 0 chr13 110309656 110309705 -9974607 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1426 240 383 0 0 chr13 110310123 110310204 -9974108 + ID4 SINE ID 2 82 -1 4 1426 360 94 0 0 chr13 110314126 110314179 -9970133 + (CAT)n Simple_repeat Simple_repeat 2 54 0 4 1426 604 221 16 8 chr13 110314188 110314311 -9970001 - B1_Mur1 SINE Alu -25 124 1 4 1426 306 254 15 0 chr13 110314517 110314584 -9969728 - Lx7 LINE L1 -1050 6646 6579 4 1426 795 265 52 26 chr13 110314842 110315113 -9969199 - Lx7 LINE L1 -1333 6363 6086 4 1426 325 255 222 5 chr13 110315101 110315290 -9969022 - Lx7 LINE L1 -92 5788 5559 4 1426 186 200 0 100 chr13 110315315 110315365 -9968947 - L2 LINE L2 -3363 56 12 4 1426 229 312 37 12 chr13 110315411 110315492 -9968820 + L2c LINE L2 3285 3367 -20 4 1426 285 115 0 16 chr13 110315777 110315839 -9968473 - L1Md_F2 LINE L1 0 6582 6522 4 1426 1146 82 0 0 chr13 110315839 110315986 -9968326 + B1_Mus2 SINE Alu 1 147 0 4 1426 572 158 12 8 chr13 110316694 110316843 -9967469 - RMER6D LTR ERVK -530 226 1 4 1426 24 0 0 0 chr13 110317700 110317724 -9966588 + AT_rich Low_complexity Low_complexity 1 24 0 4 1426 438 20 0 0 chr13 110317879 110317930 -9966382 + (TA)n Simple_repeat Simple_repeat 1 51 0 4 1426 198 0 0 0 chr13 110317930 110317951 -9966361 + (CA)n Simple_repeat Simple_repeat 2 23 0 4 1426 325 173 8 35 chr13 110317951 110318016 -9966296 - B2_Mm2 SINE B2 -103 113 47 4 1426 1260 107 11 0 chr13 110318063 110318240 -9966072 - B2_Mm1t SINE B2 -14 179 1 4 1426 621 106 0 0 chr13 110318791 110318895 -9965417 + (TG)n Simple_repeat Simple_repeat 1 104 0 4 1426 810 43 26 0 chr13 110319646 110319761 -9964551 + (TC)n Simple_repeat Simple_repeat 2 119 0 4 1426 564 15 0 0 chr13 110320721 110320786 -9963526 + (TC)n Simple_repeat Simple_repeat 1 65 0 4 1426 4003 207 131 14 chr13 110321293 110323413 -9960899 - Lx7 LINE L1 0 7460 5050 4 1426 575 227 87 16 chr13 110323413 110323591 -9960721 + MTD LTR MaLR 187 419 0 4 1426 323 330 6 2 chr13 110323670 110323785 -9960527 + MIRc SINE MIR 70 186 -76 4 1426 369 149 0 0 chr13 110323797 110323864 -9960448 + (TG)n Simple_repeat Simple_repeat 2 68 0 4 1426 432 0 0 0 chr13 110323864 110323912 -9960400 + (GA)n Simple_repeat Simple_repeat 1 48 0 4 1426 268 227 0 74 chr13 110325259 110325340 -9958972 - Lx6 LINE L1 -362 7098 7024 4 1426 893 153 181 21 chr13 110326036 110326229 -9958083 - URR1B DNA MER1_type 0 225 2 4 1426 249 319 0 0 chr13 110328099 110328168 -9956144 + ID4 SINE ID 4 72 -11 4 1426 714 55 0 0 chr13 110328181 110328272 -9956040 + (GA)n Simple_repeat Simple_repeat 2 92 0 4 1426 567 0 0 0 chr13 110328436 110328499 -9955813 + (TTCC)n Simple_repeat Simple_repeat 4 66 0 4 1426 236 184 299 2 chr13 110328511 110328583 -9955729 - PB1D7 SINE Alu -18 102 13 4 1426 897 300 75 32 chr13 110328986 110329424 -9954888 - RLTR12B LTR ERVK -25 503 47 4 1426 309 219 0 0 chr13 110329493 110329566 -9954746 + T-rich Low_complexity Low_complexity 1 73 0 4 1426 359 307 102 0 chr13 110330071 110330237 -9954075 + B3A SINE B2 1 183 -15 4 1426 338 277 56 75 chr13 110331386 110331546 -9952766 - L1ME3A LINE L1 -16 6157 6001 4 1426 437 355 103 36 chr13 110332752 110333112 -9951200 - MLT1I LTR MaLR -9 402 19 4 1426 22 0 0 0 chr13 110333207 110333229 -9951083 + AT_rich Low_complexity Low_complexity 1 22 0 4 1426 21 0 0 0 chr13 110333283 110333304 -9951008 + AT_rich Low_complexity Low_complexity 1 21 0 4 1426 295 376 15 39 chr13 110335326 110335456 -9948856 - PB1 SINE Alu 0 127 1 4 1426 317 223 39 47 chr13 110335674 110335801 -9948511 - Lx9 LINE L1 -1 7643 7518 4 1426 377 70 0 17 chr13 110335801 110335859 -9948453 + (TA)n Simple_repeat Simple_repeat 2 58 0 4 1426 804 264 51 63 chr13 110335864 110336179 -9948133 - Lx9 LINE L1 -171 7473 7163 4 1426 463 154 0 96 chr13 110336241 110336356 -9947956 - Lx3A LINE L1 0 6981 6878 4 1426 1892 219 38 19 chr13 110337200 110337671 -9946641 - Lx6 LINE L1 0 7460 6981 4 1426 707 56 74 6 chr13 110337679 110337841 -9946471 + (TTTTTG)n Simple_repeat Simple_repeat 2 174 0 4 1426 838 276 121 40 chr13 110337844 110338248 -9946064 - Lx6 LINE L1 -489 6971 6535 4 1426 769 308 87 7 chr13 110341299 110341574 -9942738 - MLT1B LTR MaLR 0 390 94 4 1426 380 240 153 17 chr13 110343179 110343304 -9941008 - PB1D9 SINE Alu 0 150 7 4 1426 443 221 75 28 chr13 110343683 110343790 -9940522 + RSINE1 SINE B4 14 125 -40 4 1426 428 98 16 0 chr13 110343808 110343869 -9940443 - HAL1-3A_ME LINE L1 -828 2030 1969 4 1426 385 130 40 0 chr13 110343869 110343969 -9940343 + (TCTG)n Simple_repeat Simple_repeat 2 105 0 4 1426 366 147 0 0 chr13 110343969 110344037 -9940275 + (CA)n Simple_repeat Simple_repeat 1 68 0 4 1426 46 45 0 0 chr13 110344066 110344133 -9940179 + AT_rich Low_complexity Low_complexity 1 67 0 4 1426 1257 41 0 0 chr13 110344225 110344372 -9939940 + B1_Mus2 SINE Alu 1 147 0 4 1426 195 125 0 0 chr13 110344372 110344412 -9939900 + (A)n Simple_repeat Simple_repeat 1 40 0 4 1426 879 184 5 0 chr13 110347675 110348087 -9936225 + (TG)n Simple_repeat Simple_repeat 1 414 0 4 1426 890 167 0 6 chr13 110348130 110348311 -9936001 + (TG)n Simple_repeat Simple_repeat 1 180 0 4 1426 306 0 0 0 chr13 110349078 110349112 -9935200 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1426 229 136 0 119 chr13 110349456 110349523 -9934789 + Lx9 LINE L1 7580 7638 -6 4 1426 1192 214 104 44 chr13 110349529 110349827 -9934485 - ORR1D1 LTR MaLR -58 316 1 4 1426 215 222 0 0 chr13 110351177 110351231 -9933081 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 4 1426 477 0 0 0 chr13 110352242 110352295 -9932017 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1426 21 0 0 0 chr13 110352383 110352404 -9931908 + AT_rich Low_complexity Low_complexity 1 21 0 4 1426 1972 117 28 6 chr13 110352704 110353022 -9931290 - ORR1A4 LTR MaLR -4 325 1 4 1426 391 331 50 6 chr13 110353227 110353409 -9930903 - MARNA DNA Mariner -167 419 230 4 1426 6501 49 0 13 chr13 110353431 110354256 -9930056 + L1Md_F2 LINE L1 5769 6582 0 4 1426 812 207 278 50 chr13 110354680 110355129 -9929183 - RLTR20C LTR ERVK 0 551 1 4 1426 835 264 83 60 chr13 110355228 110355579 -9928733 - ORR1E LTR MaLR 0 359 1 4 1426 243 182 41 29 chr13 110355859 110356029 -9928283 + (TA)n Simple_repeat Simple_repeat 2 173 0 4 1426 187 161 0 35 chr13 110356018 110356076 -9928236 + (CATATA)n Simple_repeat Simple_repeat 5 60 0 4 1426 257 238 23 23 chr13 110356077 110356163 -9928149 - RMER12 LTR ERVK -487 835 750 4 1426 619 231 93 70 chr13 110357355 110357435 -9926877 + URR1B DNA MER1_type 1 78 -147 4 1426 3303 103 28 14 chr13 110357435 110357938 -9926374 + Lx3A LINE L1 6469 6978 -3 4 1426 619 231 93 70 chr13 110357938 110358071 -9926241 + URR1B DNA MER1_type 79 219 -6 4 1426 265 273 45 0 chr13 110358366 110358454 -9925858 + L1MA5 LINE L1 6209 6300 0 4 1426 33 0 0 0 chr13 110359676 110359709 -9924603 + AT_rich Low_complexity Low_complexity 1 33 0 4 1426 358 259 12 0 chr13 110360322 110360492 -9923820 + (TA)n Simple_repeat Simple_repeat 2 173 0 4 1426 370 312 35 28 chr13 110360630 110360775 -9923537 - B1_Mur4 SINE Alu -2 148 3 5 1426 246 306 94 0 chr13 110361282 110361367 -9922945 + L3 LINE CR1 3989 4081 -408 5 1426 440 324 0 78 chr13 110361374 110361528 -9922784 + ID_B1 SINE B4 83 224 0 5 1426 238 196 59 0 chr13 110361485 110361536 -9922776 + FAM SINE Alu 262 315 0 5 178 2976 108 20 0 chr13 110362276 110362731 -9921581 + L1_Mm LINE L1 5418 5881 -2 5 1427 693 0 0 0 chr13 110362931 110363008 -9921304 + (GAA)n Simple_repeat Simple_repeat 3 79 0 5 1427 324 0 0 0 chr13 110363013 110363049 -9921263 + (TTG)n Simple_repeat Simple_repeat 2 37 0 5 1427 189 367 180 19 chr13 110363311 110363522 -9920790 + L2a LINE L2 3182 3426 0 5 1427 1867 97 0 0 chr13 110365462 110365721 -9918591 - Lx3_Mus LINE L1 0 7009 6751 5 1427 228 81 27 0 chr13 110365905 110365942 -9918370 - RMER19B LTR ERVK -6 896 859 5 1427 1914 178 55 34 chr13 110365959 110366483 -9917829 - L1_Mus3 LINE L1 0 6638 6104 5 1427 264 40 60 0 chr13 110367425 110367475 -9916837 + (TTTTG)n Simple_repeat Simple_repeat 3 55 0 5 1427 624 282 129 4 chr13 110368898 110369154 -9915158 - B4 SINE B4 -4 288 1 5 1427 228 240 0 0 chr13 110369566 110369616 -9914696 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1427 209 231 9 44 chr13 110369616 110369729 -9914583 + (TATATG)n Simple_repeat Simple_repeat 6 114 0 5 1427 322 331 8 40 chr13 110369869 110369995 -9914317 + PB1 SINE Alu 2 123 -4 5 1427 425 167 147 53 chr13 110370153 110370248 -9914064 - B1_Mur1 SINE Alu 0 149 46 5 1427 386 307 92 85 chr13 110370282 110370446 -9913866 + RSINE1 SINE B4 1 165 0 5 1427 412 181 36 12 chr13 110370451 110370619 -9913693 + (CA)n Simple_repeat Simple_repeat 1 172 0 5 1427 302 287 49 10 chr13 110370720 110370822 -9913490 - PB1D10 SINE Alu -10 107 2 5 1427 502 95 0 21 chr13 110373325 110373422 -9910890 + (TA)n Simple_repeat Simple_repeat 1 95 0 5 1427 366 23 0 0 chr13 110373422 110373464 -9910848 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1427 29 0 0 0 chr13 110373487 110373516 -9910796 + AT_rich Low_complexity Low_complexity 1 29 0 5 1427 207 0 0 0 chr13 110373951 110373974 -9910338 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 5 1427 673 265 0 22 chr13 110374364 110374503 -9909809 + ID_B1 SINE B4 88 223 -1 5 1427 459 340 0 20 chr13 110374505 110374655 -9909657 + B1F1 SINE Alu 3 149 0 5 1427 211 200 22 0 chr13 110374657 110374702 -9909610 + GA-rich Low_complexity Low_complexity 3 48 0 5 1427 23 54 0 0 chr13 110375104 110375141 -9909171 + AT_rich Low_complexity Low_complexity 1 37 0 5 1427 22 0 0 0 chr13 110375195 110375217 -9909095 + AT_rich Low_complexity Low_complexity 1 22 0 5 1427 787 274 46 64 chr13 110375295 110375623 -9908689 - Lx9 LINE L1 -351 7293 6972 5 1427 408 109 0 0 chr13 110375677 110375732 -9908580 + PB1D9 SINE Alu 1 55 -65 5 1427 623 144 9 0 chr13 110375739 110375850 -9908462 + A-rich Low_complexity Low_complexity 4 115 0 5 1427 1132 302 13 0 chr13 110375856 110376161 -9908151 - Lx9 LINE L1 -997 6647 6339 5 1427 293 316 118 53 chr13 110376358 110376545 -9907767 + MER20 DNA MER1_type 6 204 -15 5 1427 387 0 0 0 chr13 110376615 110376658 -9907654 + (TC)n Simple_repeat Simple_repeat 2 44 0 5 1427 504 0 0 0 chr13 110376658 110376713 -9907599 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1427 419 0 20 0 chr13 110376713 110376763 -9907549 + (GA)n Simple_repeat Simple_repeat 1 52 0 5 1427 468 0 0 0 chr13 110377077 110377129 -9907183 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1427 270 81 0 0 chr13 110378206 110378243 -9906069 + (CAA)n Simple_repeat Simple_repeat 3 39 0 5 1427 854 19 10 0 chr13 110378284 110378388 -9905924 + (CA)n Simple_repeat Simple_repeat 1 105 0 5 1427 595 218 13 6 chr13 110379282 110379439 -9904873 + (CATATA)n Simple_repeat Simple_repeat 4 161 0 5 1427 970 293 70 46 chr13 110379439 110379965 -9904347 - Lx8 LINE L1 -1284 6189 5651 5 1427 434 301 24 6 chr13 110379971 110380138 -9904174 - L1_Mm LINE L1 -334 5549 5380 5 1427 1904 301 44 8 chr13 110380137 110380858 -9903454 + Lx8 LINE L1 6195 6941 -532 5 1427 577 158 41 58 chr13 110380900 110381021 -9903291 - RMER17C LTR ERVK -32 378 260 5 1427 489 190 0 0 chr13 110381063 110381163 -9903149 + (CA)n Simple_repeat Simple_repeat 2 101 0 5 1427 260 253 63 0 chr13 110381163 110381242 -9903070 - Lx8 LINE L1 -1305 6168 6085 5 1427 785 161 29 21 chr13 110382096 110382236 -9902076 + B1_Mur4 SINE Alu 1 141 -9 5 1427 978 167 0 0 chr13 110384055 110384235 -9900077 + GA-rich Low_complexity Low_complexity 1 180 0 5 1427 5877 75 5 1 chr13 110384492 110385271 -9899041 - Lx LINE L1 -8 6646 5865 5 1427 636 140 0 0 chr13 110385273 110385373 -9898939 + L1_Mm LINE L1 4741 4840 -1043 5 1427 450 0 0 0 chr13 110385455 110385505 -9898807 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1427 1962 149 68 26 chr13 110385800 110386151 -9898161 - ORR1B2 LTR MaLR 0 367 2 5 1427 608 299 34 61 chr13 110386815 110387111 -9897201 - B4 SINE B4 -4 288 1 5 1427 305 331 19 6 chr13 110387120 110387281 -9897031 - Charlie5 DNA MER1_type -226 2398 2236 5 1427 472 329 0 19 chr13 110387396 110387551 -9896761 + MIR SINE MIR 80 231 -31 5 1427 1873 178 90 0 chr13 110387733 110388087 -9896225 + ORR1B1 LTR MaLR 1 386 -8 5 1427 252 77 0 0 chr13 110390541 110390580 -9893732 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 5 1427 1220 82 0 0 chr13 110390585 110390731 -9893581 - B1_Mm SINE Alu -1 146 1 5 1427 261 314 0 69 chr13 110390947 110391019 -9893293 - ID4_ SINE ID 0 83 17 5 1427 922 241 67 8 chr13 110391022 110391260 -9893052 + Lx9 LINE L1 6669 6920 -724 5 1427 1267 183 52 0 chr13 110392064 110392277 -9892035 + URR1B DNA MER1_type 2 225 0 5 1427 291 106 0 78 chr13 110393147 110393198 -9891114 + Lx9 LINE L1 6874 6920 -724 5 1427 1497 65 33 0 chr13 110393480 110393664 -9890648 + B2_Mm1t SINE B2 2 191 -2 5 1427 779 209 152 24 chr13 110393763 110393914 -9890398 - Lx7 LINE L1 0 7696 7533 5 1427 207 0 0 0 chr13 110393914 110393937 -9890375 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 5 1427 779 209 152 24 chr13 110393937 110393996 -9890316 - Lx7 LINE L1 -164 7532 7459 5 1427 23 0 0 0 chr13 110395427 110395450 -9888862 + AT_rich Low_complexity Low_complexity 1 23 0 5 1427 303 244 13 0 chr13 110396029 110396107 -9888205 + CT-rich Low_complexity Low_complexity 6 84 0 5 1427 415 276 155 80 chr13 110396128 110396220 -9888092 - L1M2 LINE L1 -518 5773 5693 5 1427 1216 82 88 6 chr13 110396220 110396391 -9887921 + B2_Mm2 SINE B2 3 187 -8 5 1427 415 276 155 80 chr13 110396391 110396565 -9887747 - L1M2 LINE L1 -599 5692 5478 5 1427 927 158 27 7 chr13 110396565 110396712 -9887600 - B1_Mur4 SINE Alu 0 150 1 5 1427 415 276 155 80 chr13 110396712 110396858 -9887454 - L1M2 LINE L1 -814 5477 5329 5 1427 25 31 0 0 chr13 110396964 110396996 -9887316 + AT_rich Low_complexity Low_complexity 1 32 0 5 1427 423 324 14 41 chr13 110397066 110397211 -9887101 + B1F SINE Alu 8 148 -1 5 1427 674 143 8 0 chr13 110397212 110397331 -9886981 + GA-rich Low_complexity Low_complexity 1 120 0 5 1427 1034 306 54 14 chr13 110397623 110398048 -9886264 + L1MA8 LINE L1 5823 6264 -27 5 1427 2169 119 3 3 chr13 110398403 110398706 -9885606 - Lx3_Mus LINE L1 0 7009 6707 5 1427 1287 48 0 7 chr13 110398710 110398858 -9885454 - B1_Mm SINE Alu 0 147 1 5 1427 945 164 0 0 chr13 110400737 110400877 -9883435 + B1_Mus2 SINE Alu 1 140 -7 5 1427 192 125 0 0 chr13 110400877 110400909 -9883403 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 5 1427 1782 312 57 23 chr13 110401190 110401986 -9882326 + Lx8 LINE L1 6596 7418 -55 5 1427 286 231 31 0 chr13 110402660 110402725 -9881587 + ID4 SINE ID 2 68 -15 5 1427 481 291 97 0 chr13 110402758 110402892 -9881420 + RSINE1 SINE B4 12 158 -7 5 1427 440 62 16 0 chr13 110402900 110402964 -9881348 + (CA)n Simple_repeat Simple_repeat 2 66 0 5 1427 405 86 0 0 chr13 110403125 110403183 -9881129 + (TG)n Simple_repeat Simple_repeat 2 59 0 5 1427 290 281 95 82 chr13 110403299 110403446 -9880866 - B4A SINE B4 -136 156 8 5 1427 24 0 0 0 chr13 110403842 110403866 -9880446 + AT_rich Low_complexity Low_complexity 1 24 0 5 1427 253 250 99 93 chr13 110406018 110406190 -9878122 - MER58A DNA MER1_type -30 194 22 5 1427 332 94 0 19 chr13 110407693 110407747 -9876565 + (TCC)n Simple_repeat Simple_repeat 2 54 0 5 1427 318 269 160 8 chr13 110407750 110407881 -9876431 - HAL1-3A_ME LINE L1 -422 2436 2286 5 1427 1251 221 95 18 chr13 110408324 110408660 -9875652 + ORR1D2 LTR MaLR 8 369 -1 5 1427 483 299 59 87 chr13 110408725 110408978 -9875334 - RMER5 LTR ERV1 -287 247 2 5 1427 1075 142 114 20 chr13 110410070 110410271 -9874041 + URR1A DNA MER1_type 1 220 -6 5 1427 265 333 0 0 chr13 110410415 110410481 -9873831 + B4A SINE B4 227 292 0 5 1427 226 318 30 30 chr13 110410568 110410701 -9873611 - L1MD LINE L1 -2208 3938 3806 5 1427 2402 235 54 5 chr13 110410818 110411249 -9873063 - L1_Rod LINE L1 -3967 1880 1441 5 1427 495 0 0 0 chr13 110411249 110411304 -9873008 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1427 2402 214 80 22 chr13 110411304 110411781 -9872531 - L1_Rod LINE L1 -4407 1440 931 5 1427 486 49 0 0 chr13 110412287 110412348 -9871964 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1427 431 261 8 50 chr13 110412357 110412478 -9871834 - RSINE1 SINE B4 -45 120 5 5 1427 437 172 25 19 chr13 110412641 110412801 -9871511 + (TCTCTG)n Simple_repeat Simple_repeat 2 162 0 5 1427 1049 186 263 67 chr13 110414418 110414730 -9869582 - ORR1D1 LTR MaLR -1 373 1 5 1427 249 344 32 21 chr13 110416304 110416399 -9867913 + MIR SINE MIR 35 130 -132 5 1427 450 103 0 0 chr13 110416982 110417060 -9867252 + (GA)n Simple_repeat Simple_repeat 2 79 0 6 1427 240 218 0 0 chr13 110417318 110417373 -9866939 + A-rich Low_complexity Low_complexity 1 55 0 6 1427 206 343 0 0 chr13 110417504 110417571 -9866741 + (TG)n Simple_repeat Simple_repeat 2 68 0 6 1427 468 0 0 0 chr13 110417878 110417930 -9866382 + (CA)n Simple_repeat Simple_repeat 1 52 0 6 1427 30 0 0 0 chr13 110418631 110418661 -9865651 + AT_rich Low_complexity Low_complexity 1 30 0 6 1427 195 42 0 0 chr13 110418765 110418789 -9865523 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1427 382 186 0 93 chr13 110418901 110419008 -9865304 - Lx9 LINE L1 -292 7352 7256 6 1427 1270 55 0 0 chr13 110419102 110419248 -9865064 + B1_Mm SINE Alu 2 147 0 6 1427 192 97 0 0 chr13 110419652 110419683 -9864629 + (GAA)n Simple_repeat Simple_repeat 3 33 0 6 1427 1428 91 21 0 chr13 110420108 110420294 -9864018 - B2_Mm2 SINE B2 -2 193 4 6 1427 497 164 310 26 chr13 110420328 110420441 -9863871 + B1_Mur1 SINE Alu 5 149 0 6 1427 367 257 0 0 chr13 110420597 110420667 -9863645 + RSINE1 SINE B4 14 83 -82 6 1427 351 0 0 0 chr13 110420667 110420706 -9863606 + (GA)n Simple_repeat Simple_repeat 1 39 0 6 1427 1339 74 22 38 chr13 110421584 110421767 -9862545 + B2_Mm2 SINE B2 1 180 -15 6 1427 26 0 0 0 chr13 110424934 110424960 -9859352 + AT_rich Low_complexity Low_complexity 1 26 0 6 1427 26 30 0 0 chr13 110425150 110425183 -9859129 + AT_rich Low_complexity Low_complexity 1 33 0 6 1427 1182 82 7 0 chr13 110425391 110425537 -9858775 - B1_Mus1 SINE Alu 0 148 2 6 1427 227 286 94 16 chr13 110425982 110426046 -9858266 + RSINE1 SINE B4 68 136 -29 6 1427 180 77 0 0 chr13 110426054 110426080 -9858232 + (CA)n Simple_repeat Simple_repeat 2 27 0 6 1427 219 69 0 0 chr13 110426605 110426634 -9857678 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 6 1427 766 213 0 29 chr13 110427626 110427766 -9856546 + B1_Mus1 SINE Alu 1 136 -12 6 1427 422 36 0 18 chr13 110427766 110427823 -9856489 + (TAA)n Simple_repeat Simple_repeat 1 56 0 6 1427 215 161 50 67 chr13 110428693 110428753 -9855559 + B1F1 SINE Alu 90 148 -1 6 1427 342 114 28 14 chr13 110428836 110428907 -9855405 + G-rich Low_complexity Low_complexity 2 73 0 6 1427 220 356 134 11 chr13 110429281 110429460 -9854852 + MIR SINE MIR 4 204 -58 6 1427 236 316 0 0 chr13 110431006 110431063 -9853249 + B1F2 SINE Alu 1 57 -92 6 1427 357 62 0 0 chr13 110431064 110431112 -9853200 + (CGGGGG)n Simple_repeat Simple_repeat 2 49 0 6 1427 380 172 60 0 chr13 110431112 110431206 -9853106 + B1_Mur1 SINE Alu 41 150 0 6 1427 971 247 43 82 chr13 110432459 110432763 -9851549 + B4A SINE B4 1 292 0 6 1427 185 0 0 39 chr13 110432813 110432839 -9851473 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 6 1427 237 324 26 44 chr13 110432936 110433049 -9851263 - L1M5 LINE L1 -386 5778 5668 6 1427 932 262 50 114 chr13 110433458 110433854 -9850458 - MTE2a LTR MaLR -2 377 7 6 1427 1056 178 14 107 chr13 110434222 110434511 -9849801 - Lx3B LINE L1 0 6973 6712 6 1427 216 317 27 63 chr13 110434826 110434937 -9849375 + PB1D10 SINE Alu 1 107 -10 6 1427 1137 80 0 0 chr13 110434992 110435130 -9849182 + B1_Mus1 SINE Alu 1 138 -10 6 1427 250 185 51 85 chr13 110435609 110435668 -9848644 - PB1D10 SINE Alu -80 69 13 6 1427 938 233 19 15 chr13 110436874 110437079 -9847233 - B3 SINE B2 -10 206 1 6 1427 631 271 126 30 chr13 110437174 110437475 -9846837 + L1MA8 LINE L1 5950 6279 -12 6 1427 958 272 9 102 chr13 110438524 110438839 -9845473 - B4A SINE B4 -1 291 6 6 1427 627 149 0 0 chr13 110439542 110439649 -9844663 + (TTTC)n Simple_repeat Simple_repeat 4 110 0 6 1427 1055 101 0 6 chr13 110439649 110439809 -9844503 + (TTC)n Simple_repeat Simple_repeat 1 159 0 6 1427 433 288 34 48 chr13 110439875 110440021 -9844291 - B1F2 SINE Alu -3 146 3 6 1427 239 0 0 31 chr13 110440032 110440064 -9844248 + (TTG)n Simple_repeat Simple_repeat 2 32 0 6 1427 439 284 46 0 chr13 110440066 110440175 -9844137 - B1F SINE Alu -12 137 24 6 1427 493 286 99 18 chr13 110441602 110441773 -9842539 - B3A SINE B2 -13 185 1 6 1427 222 218 0 0 chr13 110441925 110441980 -9842332 + A-rich Low_complexity Low_complexity 1 55 0 6 1427 218 339 57 94 chr13 110442987 110443199 -9841113 - MIR SINE MIR -12 250 47 6 1427 309 89 0 0 chr13 110444009 110444054 -9840258 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1427 594 93 0 0 chr13 110444156 110444242 -9840070 + (GA)n Simple_repeat Simple_repeat 2 87 0 6 1427 294 250 26 13 chr13 110444337 110444414 -9839898 - B4 SINE B4 -212 80 3 6 1427 22 0 0 0 chr13 110445270 110445292 -9839020 + AT_rich Low_complexity Low_complexity 1 22 0 6 1427 21 36 0 0 chr13 110445628 110445656 -9838656 + AT_rich Low_complexity Low_complexity 1 28 0 6 1427 766 292 87 57 chr13 110446628 110446995 -9837317 + MLT1B LTR MaLR 1 378 -12 6 1427 410 179 15 0 chr13 110448286 110448353 -9835959 - PB1D9 SINE Alu -51 69 2 6 1427 1681 43 0 0 chr13 110448366 110448554 -9835758 - B2_Mm1t SINE B2 -5 188 1 6 1427 180 0 0 0 chr13 110449653 110449673 -9834639 + (TTA)n Simple_repeat Simple_repeat 2 21 0 6 1427 343 325 60 30 chr13 110450085 110450253 -9834059 - MIR SINE MIR -21 241 69 6 1427 945 105 0 0 chr13 110450306 110450459 -9833853 + (CTATG)n Simple_repeat Simple_repeat 2 154 0 6 1427 232 290 31 51 chr13 110451542 110451640 -9832672 - MIR3 SINE MIR -5 203 108 6 1427 311 288 66 132 chr13 110451772 110452076 -9832236 - MER33 DNA MER1_type 0 324 41 6 1427 23 0 0 0 chr13 110453721 110453744 -9830568 + AT_rich Low_complexity Low_complexity 1 23 0 6 1427 659 306 97 77 chr13 110454461 110454658 -9829654 - L1MA5 LINE L1 -246 6054 5832 6 1427 1200 58 0 0 chr13 110454658 110454795 -9829517 + B1_Mm SINE Alu 2 138 -9 6 1427 303 49 0 0 chr13 110454795 110454836 -9829476 + (CAAAC)n Simple_repeat Simple_repeat 2 42 0 6 1427 1478 44 71 6 chr13 110454840 110455023 -9829289 + B2_Mm2 SINE B2 1 195 0 6 1427 659 293 102 54 chr13 110455023 110455445 -9828867 - L1MA5 LINE L1 -469 5831 5334 6 1427 836 139 7 53 chr13 110457692 110457844 -9826468 + B1_Mur4 SINE Alu 3 147 -3 6 1427 354 138 0 0 chr13 110457844 110457902 -9826410 + (CA)n Simple_repeat Simple_repeat 1 58 0 6 1427 538 72 321 9 chr13 110458013 110458125 -9826187 - B2_Mm2 SINE B2 -2 193 47 6 1427 224 255 0 38 chr13 110458092 110458145 -9826167 - ID4_ SINE ID -6 77 27 6 1427 1289 113 11 0 chr13 110458155 110458332 -9825980 - B2_Mm1t SINE B2 -14 179 1 6 1427 812 237 56 35 chr13 110459056 110459340 -9824972 + RMER10B LTR ERVL 2 291 -107 6 1427 843 166 32 22 chr13 110459325 110459510 -9824802 + RMER10B LTR ERVL 195 381 -17 6 1427 202 244 192 0 chr13 110459563 110459641 -9824671 - MIRb SINE MIR -59 209 117 6 1427 180 111 0 0 chr13 110460147 110460174 -9824138 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 6 1427 580 42 52 0 chr13 110460553 110460649 -9823663 + (GA)n Simple_repeat Simple_repeat 2 102 0 6 1427 639 148 15 7 chr13 110461122 110461258 -9823054 + GA-rich Low_complexity Low_complexity 3 139 0 6 1427 268 319 53 42 chr13 110461273 110461368 -9822944 + B1F SINE Alu 2 97 -52 6 1427 273 57 0 0 chr13 110461376 110461411 -9822901 + (CAAG)n Simple_repeat Simple_repeat 1 35 0 6 1427 264 330 49 88 chr13 110461658 110462044 -9822268 + ORSL-2b DNA Tip100 90 460 -48 6 1427 202 73 49 0 chr13 110462815 110462856 -9821456 + (TA)n Simple_repeat Simple_repeat 1 43 0 6 1427 3223 39 0 112 chr13 110462898 110463335 -9820977 - RLTR10 LTR ERVK -2 388 1 6 1427 8857 15 3 1 chr13 110463337 110464330 -9819982 - RLTR10-int LTR ERVK -3 1984 990 6 1427 8121 32 4 5 chr13 110464424 110465376 -9818936 - RLTR10-int LTR ERVK -1034 953 3 6 1427 3212 34 0 113 chr13 110465384 110465819 -9818493 - RLTR10 LTR ERVK -4 386 1 6 1427 356 322 128 23 chr13 110467807 110468026 -9816286 - MIR SINE MIR -2 260 19 6 1427 466 243 7 19 chr13 110468272 110468427 -9815885 + RMER17C LTR ERVK 123 275 -135 6 1427 853 38 0 0 chr13 110468491 110468597 -9815715 - B1_Mus2 SINE Alu 0 147 42 6 1427 282 158 112 56 chr13 110468534 110468641 -9815671 - RLTR25B LTR ERVK -519 509 397 6 1427 223 105 0 50 chr13 110468685 110468725 -9815587 - PB1D9 SINE Alu -61 59 22 6 1427 347 183 93 41 chr13 110469038 110469135 -9815177 + RLTR25A LTR ERVK 751 852 -251 6 1427 4126 158 68 70 chr13 110469158 110470099 -9814213 - RLTR25B LTR ERVK -2 1026 88 6 1427 366 298 56 14 chr13 110470211 110470354 -9813958 + L1MB3 LINE L1 5940 6088 -95 6 1427 523 229 39 142 chr13 110470406 110470610 -9813702 + B3A SINE B2 1 183 -15 6 1427 288 0 0 0 chr13 110471060 110471092 -9813220 + (TC)n Simple_repeat Simple_repeat 1 32 0 6 1427 288 0 0 0 chr13 110471389 110471421 -9812891 + (TAGGG)n Simple_repeat Simple_repeat 4 35 0 6 1427 795 88 0 0 chr13 110471422 110471535 -9812777 + (GAGAA)n Simple_repeat Simple_repeat 2 114 0 6 1427 21 0 0 0 chr13 110473143 110473164 -9811148 + GC_rich Low_complexity Low_complexity 1 21 0 6 1427 270 0 0 0 chr13 110473708 110473738 -9810574 + (CA)n Simple_repeat Simple_repeat 2 31 0 6 1427 2222 24 24 0 chr13 110473788 110474039 -9810273 + L1Md_F3 LINE L1 6326 6582 -2 6 1427 274 206 148 16 chr13 110474646 110474774 -9809538 - Lx9 LINE L1 -15 7629 7485 6 1427 21 0 0 0 chr13 110474803 110474824 -9809488 + AT_rich Low_complexity Low_complexity 1 21 0 6 1427 354 45 0 0 chr13 110474849 110474893 -9809419 + (CA)n Simple_repeat Simple_repeat 1 44 0 6 1427 279 104 0 0 chr13 110475268 110475316 -9808996 + (T)n Simple_repeat Simple_repeat 1 48 0 6 1427 216 0 0 0 chr13 110475656 110475680 -9808632 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1427 414 0 0 0 chr13 110476593 110476639 -9807673 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1427 291 122 0 0 chr13 110478208 110478257 -9806055 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1427 207 167 0 0 chr13 110478435 110478471 -9805841 + (TTTG)n Simple_repeat Simple_repeat 3 38 0 7 1427 1424 86 37 11 chr13 110479044 110479233 -9805079 - B2_Mm2 SINE B2 0 195 2 7 1427 862 158 192 34 chr13 110479372 110479549 -9804763 - B3 SINE B2 -11 205 1 7 1427 1210 55 0 40 chr13 110480049 110480201 -9804111 + B1_Mus2 SINE Alu 2 147 0 7 1427 456 139 0 0 chr13 110480201 110480280 -9804032 + (A)n Simple_repeat Simple_repeat 1 79 0 7 1427 180 0 0 0 chr13 110480339 110480359 -9803953 + (CA)n Simple_repeat Simple_repeat 2 21 0 7 1427 239 317 153 33 chr13 110480914 110481064 -9803248 - MIRb SINE MIR -99 169 2 7 1427 234 0 0 0 chr13 110481087 110481113 -9803199 + (TG)n Simple_repeat Simple_repeat 1 26 0 7 1427 1022 126 6 0 chr13 110481831 110481990 -9802322 + URR1B DNA MER1_type 66 225 0 7 1427 224 318 0 31 chr13 110482805 110482870 -9801442 + B4A SINE B4 83 145 -147 7 1427 333 261 0 52 chr13 110482830 110482927 -9801385 + PB1D10 SINE Alu 21 112 -5 7 1427 207 146 55 0 chr13 110482927 110482982 -9801330 + GA-rich Low_complexity Low_complexity 1 58 0 7 1427 446 296 152 0 chr13 110483060 110483192 -9801120 + RSINE1 SINE B4 9 160 -5 7 1427 510 67 0 0 chr13 110483759 110483834 -9800478 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 1427 357 102 0 0 chr13 110483924 110483983 -9800329 + (CAGA)n Simple_repeat Simple_repeat 4 62 0 7 1427 342 0 0 0 chr13 110484050 110484088 -9800224 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1427 407 243 58 0 chr13 110484155 110484258 -9800054 - B1F SINE Alu 0 149 41 7 1427 264 91 0 0 chr13 110484841 110484885 -9799427 + (T)n Simple_repeat Simple_repeat 1 44 0 7 1427 501 17 0 0 chr13 110485917 110485975 -9798337 + (TC)n Simple_repeat Simple_repeat 2 59 0 7 1427 261 0 0 0 chr13 110485975 110486003 -9798309 + (TG)n Simple_repeat Simple_repeat 2 30 0 7 1427 577 310 31 0 chr13 110486004 110486133 -9798179 - RSINE1 SINE B4 -18 147 15 7 1427 661 220 96 22 chr13 110486363 110486498 -9797814 - B1_Mur1 SINE Alu -2 147 3 7 1427 230 332 88 84 chr13 110486764 110487027 -9797285 - Lx8 LINE L1 0 7473 7210 7 1427 1364 69 69 0 chr13 110487720 110487895 -9796417 - B2_Mm1t SINE B2 -5 188 2 7 1427 353 203 40 0 chr13 110489148 110489222 -9795090 - RLTR21 LTR ERVK -155 1417 1341 7 1427 4280 127 54 25 chr13 110489226 110489265 -9795047 - RMER12 LTR ERVK -517 805 768 7 1427 483 18 0 0 chr13 110489265 110489321 -9794991 + (TGGA)n Simple_repeat Simple_repeat 1 56 0 7 1427 4280 127 54 25 chr13 110489321 110490064 -9794248 - RMER12 LTR ERVK -555 767 2 7 1427 1493 76 0 5 chr13 110490262 110490448 -9793864 + B2_Mm2 SINE B2 1 185 -10 7 1427 471 212 16 41 chr13 110490691 110490798 -9793514 - B1_Mur4 SINE Alu -7 110 2 7 1427 1726 29 0 9 chr13 110491466 110491677 -9792635 - MTB LTR MaLR -2 398 190 7 1427 1259 79 6 0 chr13 110491679 110491856 -9792456 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 7 1427 1418 94 24 19 chr13 110492125 110492351 -9791961 - MTB LTR MaLR -165 214 1 7 178 1155 103 0 0 chr13 110493574 110493720 -9790592 + B1_Mus1 SINE Alu 3 148 0 7 1428 1481 88 0 40 chr13 110495231 110495432 -9788880 + B2_Mm2 SINE B2 2 194 -1 7 1428 349 253 6 6 chr13 110495936 110496099 -9788213 + (TG)n Simple_repeat Simple_repeat 2 164 0 7 1428 246 298 176 37 chr13 110497692 110497936 -9786376 - L1MB8 LINE L1 -88 6090 5813 7 1428 297 0 0 0 chr13 110498078 110498111 -9786201 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 7 1428 231 287 54 54 chr13 110498160 110498252 -9786060 - L1MD LINE L1 -542 5700 5609 7 1428 209 33 33 0 chr13 110498260 110498290 -9786022 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1428 417 229 189 18 chr13 110499536 110499647 -9784665 + RSINE1 SINE B4 1 130 -35 7 1428 323 78 0 19 chr13 110499668 110499720 -9784592 + (CATA)n Simple_repeat Simple_repeat 4 54 0 7 1428 710 189 15 8 chr13 110499755 110499888 -9784424 + B1_Mur2 SINE Alu 15 148 -1 7 1428 339 117 211 5 chr13 110500278 110500379 -9783933 - B2_Mm2 SINE B2 -10 185 47 1 1428 1252 89 65 0 chr13 110500392 110500560 -9783752 - B2_Mm1t SINE B2 -14 179 1 2 1428 1500 77 0 25 chr13 110501107 110501306 -9783006 - B2_Mm2 SINE B2 -1 194 1 3 1428 250 317 24 0 chr13 110501363 110501445 -9782867 - MTC LTR MaLR -307 114 31 4 1428 542 247 160 70 chr13 110501463 110501620 -9782692 - MTC-int LTR MaLR -7 1251 1067 4 1428 627 320 19 54 chr13 110501620 110501825 -9782487 + B3A SINE B2 1 198 0 5 1428 542 247 160 70 chr13 110501825 110501886 -9782426 - MTC-int LTR MaLR -192 1066 1008 4 1428 329 0 24 0 chr13 110501886 110501927 -9782385 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 6 1428 542 248 124 102 chr13 110501927 110502049 -9782263 - MTC-int LTR MaLR -251 1007 771 4 1428 727 288 184 23 chr13 110502169 110502478 -9781834 - ORR1E LTR MaLR 0 359 1 7 1428 893 222 50 10 chr13 110502504 110502704 -9781608 + B3 SINE B2 1 208 -8 8 1428 3998 62 21 0 chr13 110502804 110503275 -9781037 + L1_Mus1 LINE L1 6087 6567 0 9 1428 25 65 0 0 chr13 110503284 110503330 -9780982 + AT_rich Low_complexity Low_complexity 1 46 0 1 1428 1161 96 7 0 chr13 110503767 110503913 -9780399 + B1_Mus2 SINE Alu 1 147 0 1 1428 204 228 0 0 chr13 110505279 110505336 -9778976 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1428 207 0 0 0 chr13 110506330 110506353 -9777959 + (TG)n Simple_repeat Simple_repeat 1 23 0 1 1428 330 91 0 0 chr13 110506355 110506410 -9777902 + (CAGA)n Simple_repeat Simple_repeat 2 56 0 1 1428 219 350 90 17 chr13 110506516 110506693 -9777619 - MIRb SINE MIR -23 245 56 1 1428 299 306 210 5 chr13 110507548 110507748 -9776564 - Tigger5 DNA MER2_type -15 2391 2151 1 1428 272 137 19 38 chr13 110507875 110507928 -9776384 + B1F2 SINE Alu 10 61 -88 1 1428 1024 240 10 0 chr13 110507943 110508147 -9776165 + B3 SINE B2 1 206 -10 1 1428 1207 191 106 33 chr13 110508823 110509126 -9775186 - Lx9 LINE L1 -8 7636 7312 1 1428 222 348 59 22 chr13 110509472 110509607 -9774705 + MIRb SINE MIR 60 199 -69 2 1428 317 278 0 118 chr13 110510241 110510351 -9773961 + PB1 SINE Alu 21 117 -10 2 1428 181 188 31 0 chr13 110510448 110510480 -9773832 - L2a LINE L2 -39 3387 3355 2 1428 411 304 32 102 chr13 110511338 110511607 -9772705 - MIRb SINE MIR -6 262 2 2 1428 190 296 84 0 chr13 110512545 110512616 -9771696 - MIRb SINE MIR -167 101 25 2 1428 928 69 20 14 chr13 110513483 110513630 -9770682 + L1_Mus3 LINE L1 6491 6638 0 2 1428 2053 119 9 12 chr13 110513796 110514118 -9770194 - ORR1A4 LTR MaLR -8 321 1 2 1428 312 27 0 0 chr13 110514212 110514249 -9770063 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2 1428 180 0 0 0 chr13 110514335 110514355 -9769957 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2 1428 1145 46 0 0 chr13 110514355 110514486 -9769826 - B1_Mus1 SINE Alu -13 135 5 2 1428 305 273 39 55 chr13 110514505 110514522 -9769790 - B1_Mus1 SINE Alu -1 147 70 3 1428 506 223 10 0 chr13 110514522 110514625 -9769687 - ID_B1 SINE B4 -12 212 109 3 1428 219 375 0 0 chr13 110514791 110514871 -9769441 - MIRc SINE MIR -107 161 82 3 1428 594 109 0 0 chr13 110514881 110514973 -9769339 + (TC)n Simple_repeat Simple_repeat 2 93 0 3 1428 193 304 0 18 chr13 110515243 110515300 -9769012 + MER5A DNA MER1_type 59 114 -75 3 1428 21 0 0 0 chr13 110516482 110516503 -9767809 + AT_rich Low_complexity Low_complexity 1 21 0 3 1428 201 94 0 0 chr13 110516735 110516767 -9767545 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 3 1428 207 0 0 0 chr13 110516783 110516806 -9767506 + (TTG)n Simple_repeat Simple_repeat 2 24 0 3 1428 226 235 0 0 chr13 110517366 110517417 -9766895 + A-rich Low_complexity Low_complexity 4 54 0 3 1428 24 0 0 0 chr13 110519130 110519154 -9765158 + AT_rich Low_complexity Low_complexity 1 24 0 3 1428 380 352 97 4 chr13 110519471 110519708 -9764604 - L2a LINE L2 -8 3418 3160 4 1428 266 313 230 22 chr13 110519766 110520044 -9764268 - L2a LINE L2 -340 3079 2744 4 1428 996 168 0 7 chr13 110520358 110520508 -9763804 + B1_Mur3 SINE Alu 1 149 0 4 1428 243 146 0 0 chr13 110520510 110520551 -9763761 + (GAA)n Simple_repeat Simple_repeat 2 42 0 4 1428 256 256 16 57 chr13 110520551 110520675 -9763637 - L1M3 LINE L1 -910 5230 5112 4 1428 493 237 32 80 chr13 110520691 110520879 -9763433 + L1M3 LINE L1 4511 4689 -1451 4 1428 299 246 29 0 chr13 110520905 110520974 -9763338 - RSINE1 SINE B4 -2 163 93 4 1428 249 33 0 0 chr13 110521429 110521459 -9762853 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 1428 297 0 0 0 chr13 110521459 110521491 -9762821 + (TG)n Simple_repeat Simple_repeat 2 34 0 4 1428 361 329 38 57 chr13 110521494 110521652 -9762660 - RSINE1 SINE B4 -6 159 5 4 1428 1995 123 79 47 chr13 110521667 110522009 -9762303 - Lx LINE L1 -2 6652 6300 4 1428 321 302 92 20 chr13 110522743 110522895 -9761417 + 7SK RNA RNA 4 166 -165 5 1428 196 351 0 0 chr13 110522968 110523042 -9761270 - MIRb SINE MIR -21 247 174 5 1428 459 0 0 0 chr13 110524756 110524807 -9759505 + (TC)n Simple_repeat Simple_repeat 2 52 0 5 1428 225 0 0 0 chr13 110524807 110524831 -9759481 + (TG)n Simple_repeat Simple_repeat 2 26 0 5 1428 330 261 0 14 chr13 110526180 110526250 -9758062 + AluF_3 SINE Alu 138 206 -105 5 1428 212 167 0 0 chr13 110526257 110526299 -9758013 + T-rich Low_complexity Low_complexity 1 42 0 5 1428 1279 48 0 0 chr13 110526302 110526449 -9757863 - B1_Mus1 SINE Alu -1 147 1 5 1428 378 61 30 15 chr13 110527797 110527864 -9756448 + (CA)n Simple_repeat Simple_repeat 1 68 0 5 1428 206 81 27 0 chr13 110527924 110527961 -9756351 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 5 1428 243 329 14 0 chr13 110528188 110528258 -9756054 - ID4_ SINE ID -11 72 2 5 1428 228 67 0 0 chr13 110528430 110528460 -9755852 + (T)n Simple_repeat Simple_repeat 1 30 0 6 1428 265 333 0 13 chr13 110528615 110528694 -9755618 - ID4_ SINE ID -5 78 1 6 1428 270 302 0 0 chr13 110528712 110528798 -9755514 + (CATATA)n Simple_repeat Simple_repeat 1 86 0 6 1428 1033 346 36 19 chr13 110528956 110529489 -9754823 - Lx8 LINE L1 -190 7283 6742 6 1428 185 94 31 0 chr13 110530361 110530393 -9753919 + (TCTG)n Simple_repeat Simple_repeat 1 33 0 6 1428 234 0 0 0 chr13 110531967 110531993 -9752319 + (TTA)n Simple_repeat Simple_repeat 3 28 0 6 1428 351 0 0 0 chr13 110532151 110532190 -9752122 + (TG)n Simple_repeat Simple_repeat 1 39 0 6 1428 1322 69 67 28 chr13 110532745 110532924 -9751388 - B2_Mm2 SINE B2 -6 189 4 6 1428 365 250 91 30 chr13 110533109 110533241 -9751071 + B1F1 SINE Alu 1 140 -9 6 1428 263 189 0 131 chr13 110533257 110533318 -9750994 + ID4_ SINE ID 2 54 -29 6 1428 968 258 26 30 chr13 110533448 110533716 -9750596 + Lx8 LINE L1 6936 7202 -271 7 1428 395 136 321 18 chr13 110534853 110534965 -9749347 - B2_Mm2 SINE B2 -3 192 47 7 1428 1192 164 11 0 chr13 110535031 110535208 -9749104 - B2_Mm1t SINE B2 -14 179 1 7 1428 1874 63 4 33 chr13 110535220 110535465 -9748847 - L1_Mus2 LINE L1 0 6566 6329 7 1428 678 325 48 26 chr13 110535826 110536098 -9748214 + B4A SINE B4 12 289 -3 7 1428 463 293 0 142 chr13 110536405 110536560 -9747752 - MTEa LTR MaLR 0 379 247 7 1428 396 274 10 10 chr13 110536600 110536696 -9747616 - MTEa LTR MaLR -283 96 1 7 1428 1959 149 16 12 chr13 110537134 110537454 -9746858 + ORR1A4 LTR MaLR 1 321 -8 7 1428 1783 220 100 44 chr13 110537717 110538217 -9746095 - MT2A LTR ERVL -5 528 1 7 1428 412 348 80 0 chr13 110538372 110538573 -9745739 + MER119 DNA MER1_type 40 256 -327 7 1428 521 263 59 7 chr13 110538603 110538756 -9745556 + MER119 DNA MER1_type 422 582 -1 7 1428 27 0 0 0 chr13 110539238 110539265 -9745047 + AT_rich Low_complexity Low_complexity 1 27 0 7 1428 405 221 0 0 chr13 110539641 110539718 -9744594 - B1F SINE Alu -55 94 18 8 1428 513 298 80 40 chr13 110539842 110540066 -9744246 - B4A SINE B4 -52 240 8 8 1428 213 39 0 0 chr13 110542085 110542111 -9742201 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 8 1428 278 326 25 25 chr13 110542149 110542303 -9742009 - Charlie18a DNA MER1_type -9 333 183 8 1428 387 0 0 0 chr13 110542303 110542346 -9741966 + (TC)n Simple_repeat Simple_repeat 2 44 0 8 1428 278 326 25 25 chr13 110542346 110542389 -9741923 - Charlie18a DNA MER1_type -160 182 137 8 1428 1323 80 62 6 chr13 110543317 110543493 -9740819 - B2_Mm2 SINE B2 -7 188 3 8 1428 183 80 0 0 chr13 110543590 110543615 -9740697 + (TG)n Simple_repeat Simple_repeat 1 25 0 8 1428 192 77 0 0 chr13 110543636 110543662 -9740650 + (TATG)n Simple_repeat Simple_repeat 4 29 0 8 1428 1075 273 41 30 chr13 110543706 110543974 -9740338 - B4 SINE B4 -18 274 4 8 1428 487 238 164 30 chr13 110543979 110544144 -9740168 - ID_B1 SINE B4 -1 223 47 8 1428 444 278 265 16 chr13 110544518 110544637 -9739675 - L1MA8 LINE L1 -203 6088 5937 9 1428 405 0 0 0 chr13 110544637 110544682 -9739630 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 9 1428 444 278 265 16 chr13 110544682 110544928 -9739384 - L1MA8 LINE L1 -355 5936 5633 9 1428 23 33 0 0 chr13 110545137 110545167 -9739145 + AT_rich Low_complexity Low_complexity 1 30 0 9 1428 202 143 41 0 chr13 110545546 110545595 -9738717 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1428 449 236 23 39 chr13 110545669 110545797 -9738515 - B1F SINE Alu -5 144 19 9 1428 566 234 0 0 chr13 110545837 110545948 -9738364 + B1_Mur1 SINE Alu 3 113 -36 9 1428 227 103 26 0 chr13 110545986 110546025 -9738287 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 9 1428 25 0 0 0 chr13 110546804 110546829 -9737483 + AT_rich Low_complexity Low_complexity 1 25 0 9 1428 226 364 10 20 chr13 110546836 110546937 -9737375 + PB1D10 SINE Alu 5 104 -13 9 1428 30 0 0 0 chr13 110549635 110549665 -9734647 + AT_rich Low_complexity Low_complexity 1 30 0 9 1428 570 248 36 21 chr13 110550882 110551022 -9733290 + B1_Mur1 SINE Alu 6 147 -2 1 1428 905 36 9 0 chr13 110551995 110552107 -9732205 - B1_Mm SINE Alu 0 147 35 1 1428 216 111 0 0 chr13 110552153 110552189 -9732123 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1428 39921 10 2 6 chr13 110552191 110558798 -9725514 - L1Md_A LINE L1 -2 6580 1 1 1428 21 0 0 0 chr13 110559356 110559377 -9724935 + AT_rich Low_complexity Low_complexity 1 21 0 1 1428 372 184 266 0 chr13 110560439 110560548 -9723764 - URR1B DNA MER1_type -87 138 1 1 1428 345 47 0 0 chr13 110560761 110560804 -9723508 + (CATA)n Simple_repeat Simple_repeat 3 45 0 1 1428 306 87 0 0 chr13 110561551 110561597 -9722715 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1428 237 65 0 0 chr13 110561721 110561752 -9722560 + (CA)n Simple_repeat Simple_repeat 2 32 0 1 1428 251 272 123 0 chr13 110561760 110561841 -9722471 + MIRb SINE MIR 161 251 -17 1 1428 1242 174 4 13 chr13 110563040 110563267 -9721045 - URR1B DNA MER1_type 0 225 1 1 1428 292 355 29 22 chr13 110563482 110563620 -9720692 + B1F1 SINE Alu 1 139 -10 1 1428 207 0 0 0 chr13 110563620 110563643 -9720669 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1 1428 528 262 31 8 chr13 110563662 110563789 -9720523 + RSINE1 SINE B4 2 131 -34 1 1428 501 347 68 29 chr13 110563827 110564106 -9720206 + B4A SINE B4 2 291 -1 1 1428 792 84 0 22 chr13 110564478 110564612 -9719700 + (GGA)n Simple_repeat Simple_repeat 1 131 0 1 1428 409 102 40 20 chr13 110564944 110565044 -9719268 + T-rich Low_complexity Low_complexity 3 104 0 1 1428 432 0 0 0 chr13 110565735 110565783 -9718529 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1428 31 68 0 0 chr13 110567675 110567734 -9716578 + AT_rich Low_complexity Low_complexity 1 59 0 1 1428 341 58 19 0 chr13 110568083 110568135 -9716177 + (TA)n Simple_repeat Simple_repeat 1 53 0 1 1428 198 0 0 0 chr13 110568367 110568389 -9715923 + (CA)n Simple_repeat Simple_repeat 2 23 0 1 1428 279 239 182 33 chr13 110568900 110569021 -9715291 + B1_Mur1 SINE Alu 10 148 -1 1 1428 308 253 13 0 chr13 110569296 110569375 -9714937 - ID4_ SINE ID -3 80 1 1 1428 1102 88 0 0 chr13 110569844 110569991 -9714321 - B1_Mus1 SINE Alu 0 148 2 1 1428 594 168 50 16 chr13 110571275 110571396 -9712916 + B1_Mur1 SINE Alu 25 149 0 1 1428 447 113 0 0 chr13 110572471 110572542 -9711770 + (TTCC)n Simple_repeat Simple_repeat 2 72 0 1 1428 180 312 73 0 chr13 110573910 110574006 -9710306 + MIR SINE MIR 56 158 -104 1 1428 938 167 0 6 chr13 110574243 110574424 -9709888 + GA-rich Low_complexity Low_complexity 1 180 0 1 1428 710 285 25 5 chr13 110575133 110575334 -9708978 + B4A SINE B4 25 229 -63 1 1428 719 148 148 0 chr13 110575334 110575462 -9708850 + B1_Mus2 SINE Alu 1 147 0 1 1428 202 301 14 14 chr13 110575540 110575614 -9708698 + (CATA)n Simple_repeat Simple_repeat 3 76 0 1 1428 279 0 0 0 chr13 110575723 110575754 -9708558 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1 1428 499 220 102 0 chr13 110576933 110576946 -9707366 - B1F SINE Alu -8 141 129 1 1428 858 70 0 0 chr13 110576946 110577060 -9707252 + (TC)n Simple_repeat Simple_repeat 1 114 0 1 1428 499 220 102 0 chr13 110577060 110577164 -9707148 - B1F SINE Alu -21 128 13 1 1428 357 228 0 21 chr13 110577533 110577627 -9706685 - MLT1A1 LTR MaLR -25 383 292 1 1428 1015 124 7 0 chr13 110577824 110577969 -9706343 - B1_Mur3 SINE Alu -1 148 3 1 1428 519 112 0 0 chr13 110578051 110578131 -9706181 + (TCC)n Simple_repeat Simple_repeat 2 81 0 1 1428 734 181 15 22 chr13 110578143 110578279 -9706033 - B1_Mur4 SINE Alu -13 137 3 1 1428 414 0 0 0 chr13 110579975 110580021 -9704291 + (TC)n Simple_repeat Simple_repeat 1 46 0 1 1428 363 331 69 0 chr13 110581407 110581537 -9702775 + B1F SINE Alu 6 144 -5 1 1428 213 119 0 0 chr13 110581567 110581609 -9702703 + (T)n Simple_repeat Simple_repeat 1 42 0 1 1428 387 349 35 18 chr13 110581633 110581802 -9702510 - MLT1J LTR MaLR -150 362 191 1 1428 1574 43 21 0 chr13 110582949 110583137 -9701175 - B2_Mm1t SINE B2 0 193 2 1 1428 345 47 0 0 chr13 110585169 110585212 -9699100 + (CATA)n Simple_repeat Simple_repeat 2 44 0 1 1428 293 277 39 70 chr13 110585320 110585448 -9698864 - MIRb SINE MIR -46 222 99 1 1428 199 0 31 31 chr13 110585523 110585555 -9698757 + (TATATG)n Simple_repeat Simple_repeat 2 33 0 1 1428 1039 218 114 18 chr13 110585556 110585950 -9698362 - MT2A LTR ERVL -78 455 24 1 1428 654 13 0 0 chr13 110586803 110586878 -9697434 + (TC)n Simple_repeat Simple_repeat 1 75 0 1 1428 189 107 0 0 chr13 110587539 110587567 -9696745 + (ATG)n Simple_repeat Simple_repeat 3 30 0 1 1428 188 329 11 34 chr13 110587780 110587868 -9696444 - L2a LINE L2 -21 3405 3320 1 1428 252 0 0 0 chr13 110587988 110588016 -9696296 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 1 1428 438 291 0 0 chr13 110589270 110589380 -9694932 + PB1D10 SINE Alu 1 110 -7 1 1428 321 250 0 0 chr13 110589387 110589455 -9694857 + ID4 SINE ID 4 71 -12 1 1428 463 195 8 8 chr13 110589476 110589600 -9694712 + (CATA)n Simple_repeat Simple_repeat 4 127 0 1 1428 306 0 0 0 chr13 110589678 110589712 -9694600 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1428 235 337 12 0 chr13 110590178 110590261 -9694051 + (CATA)n Simple_repeat Simple_repeat 1 84 0 1 1428 215 238 0 36 chr13 110590261 110590344 -9693968 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 1 1428 245 253 177 0 chr13 110591044 110591123 -9693189 + RSINE1 SINE B4 34 126 -39 1 1428 253 119 60 0 chr13 110591123 110591190 -9693122 + (TCTCTG)n Simple_repeat Simple_repeat 2 72 0 1 1428 324 169 0 0 chr13 110591191 110591268 -9693044 + (TG)n Simple_repeat Simple_repeat 2 78 0 1 1428 232 261 15 30 chr13 110591706 110591773 -9692539 + (TATATG)n Simple_repeat Simple_repeat 1 66 0 1 1428 567 338 17 66 chr13 110591804 110592092 -9692220 - B4A SINE B4 -18 274 1 1 1428 243 123 74 0 chr13 110593787 110593868 -9690444 + (TA)n Simple_repeat Simple_repeat 1 87 0 1 1428 386 260 37 28 chr13 110593972 110594079 -9690233 + B1F SINE Alu 32 139 -10 1 1428 267 31 0 0 chr13 110594079 110594111 -9690201 + (CA)n Simple_repeat Simple_repeat 2 33 0 1 1428 2535 100 105 24 chr13 110594998 110595417 -9688895 - RLTR11B LTR ERVK 0 453 1 1 1428 249 146 0 0 chr13 110596920 110596968 -9687344 + (CACCC)n Simple_repeat Simple_repeat 3 50 0 1 1428 391 259 209 31 chr13 110597342 110597505 -9686807 + ID_B1 SINE B4 5 196 -28 1 1428 219 69 0 0 chr13 110597673 110597702 -9686610 + (CATG)n Simple_repeat Simple_repeat 3 31 0 1 1428 384 187 0 0 chr13 110598696 110598819 -9685493 + (TCTG)n Simple_repeat Simple_repeat 4 126 0 1 1428 189 0 0 0 chr13 110599142 110599163 -9685149 + (C)n Simple_repeat Simple_repeat 1 21 0 1 1428 1223 54 0 0 chr13 110599621 110599768 -9684544 - B1_Mus2 SINE Alu 0 147 1 1 1428 651 250 85 82 chr13 110600591 110600861 -9683451 + B4A SINE B4 3 273 -19 1 1428 222 193 0 0 chr13 110600928 110600985 -9683327 + CT-rich Low_complexity Low_complexity 2 58 0 1 1428 291 218 11 44 chr13 110600992 110601083 -9683229 + (TCTCTG)n Simple_repeat Simple_repeat 5 92 0 1 1428 542 207 0 6 chr13 110601084 110601264 -9683048 + CT-rich Low_complexity Low_complexity 1 179 0 1 1428 253 203 17 0 chr13 110601274 110601333 -9682979 + B3 SINE B2 2 61 -155 1 1428 8238 25 0 0 chr13 110601338 110602270 -9682042 - L1Md_A LINE L1 0 6582 5651 1 1428 474 91 0 0 chr13 110602398 110602475 -9681837 + (CA)n Simple_repeat Simple_repeat 2 78 0 1 1428 226 322 139 21 chr13 110603321 110603559 -9680753 - L1M5 LINE L1 -367 5757 5492 1 1428 183 42 0 0 chr13 110603675 110603699 -9680613 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1428 1377 84 16 5 chr13 110605214 110605405 -9678907 - B2_Mm1a SINE B2 0 193 1 1 1428 441 116 0 0 chr13 110608437 110608506 -9675806 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 1428 720 0 0 0 chr13 110609217 110609297 -9675015 + (GAA)n Simple_repeat Simple_repeat 1 80 0 1 1428 1177 179 9 26 chr13 110609719 110609948 -9674364 + URR1B DNA MER1_type 1 225 0 1 1428 294 383 35 17 chr13 110610424 110610655 -9673657 - MIRb SINE MIR -8 260 26 1 1428 881 44 0 9 chr13 110610910 110611025 -9673287 + (TTTTC)n Simple_repeat Simple_repeat 2 115 0 1 1428 228 188 211 28 chr13 110611109 110611180 -9673132 - PB1D10 SINE Alu -1 116 33 1 1428 799 296 45 35 chr13 110611258 110611545 -9672767 - B4 SINE B4 0 292 3 1 1428 194 0 39 0 chr13 110611550 110611576 -9672736 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1428 22 35 0 0 chr13 110611606 110611635 -9672677 + AT_rich Low_complexity Low_complexity 1 29 0 1 1428 214 239 57 43 chr13 110611700 110611770 -9672542 + MIR SINE MIR 82 152 -56 1 1428 468 0 0 0 chr13 110613032 110613084 -9671228 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1428 302 169 0 15 chr13 110613141 110613207 -9671105 + GA-rich Low_complexity Low_complexity 2 66 0 1 1428 1218 43 0 0 chr13 110613436 110613597 -9670715 + (CA)n Simple_repeat Simple_repeat 1 161 0 1 1428 208 160 39 20 chr13 110614430 110614481 -9669831 + T-rich Low_complexity Low_complexity 4 55 0 1 1428 274 329 12 0 chr13 110614522 110614607 -9669705 + CT-rich Low_complexity Low_complexity 3 88 0 1 1428 1231 173 14 14 chr13 110614665 110614888 -9669424 + URR1B DNA MER1_type 3 225 0 1 1428 321 26 0 0 chr13 110615620 110615658 -9668654 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1 1428 1836 146 116 21 chr13 110616196 110616574 -9667738 + MTC LTR MaLR 1 414 -7 1 1428 245 327 70 35 chr13 110616633 110616747 -9667565 - MIRc SINE MIR -127 141 24 2 1428 243 0 0 0 chr13 110617992 110618019 -9666293 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1428 506 259 116 39 chr13 110618248 110618429 -9665883 + Lx8 LINE L1 7101 7295 -178 2 1428 218 316 53 0 chr13 110618621 110618697 -9665615 + ID4 SINE ID 2 81 -2 2 1428 1287 27 7 7 chr13 110618794 110618941 -9665371 + B1_Mm SINE Alu 1 147 0 2 1428 348 24 0 0 chr13 110618941 110618982 -9665330 + (GA)n Simple_repeat Simple_repeat 2 42 0 2 1428 420 55 0 0 chr13 110619704 110619759 -9664553 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1428 225 0 0 0 chr13 110620290 110620315 -9663997 + (T)n Simple_repeat Simple_repeat 1 25 0 2 1428 22 70 0 0 chr13 110620586 110620629 -9663683 + AT_rich Low_complexity Low_complexity 1 43 0 2 1428 1918 175 44 6 chr13 110621251 110621590 -9662722 - ORR1B2 LTR MaLR 0 367 16 2 1428 337 304 131 15 chr13 110621615 110621752 -9662560 - HAL1-3A_ME LINE L1 -419 2439 2287 2 1428 928 200 0 0 chr13 110621765 110621910 -9662402 - B1_Mur3 SINE Alu -1 148 4 2 1428 359 100 33 0 chr13 110621953 110622013 -9662299 + (TATG)n Simple_repeat Simple_repeat 4 65 0 2 1428 529 91 22 11 chr13 110622490 110622579 -9661733 + (GGAA)n Simple_repeat Simple_repeat 4 93 0 2 1428 239 182 12 61 chr13 110622582 110622664 -9661648 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 2 1428 618 14 0 0 chr13 110622688 110622759 -9661553 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 2 1428 366 277 50 0 chr13 110622759 110622860 -9661452 - B1_Mur1 SINE Alu -38 111 6 2 1428 206 295 82 0 chr13 110623649 110623710 -9660602 + MIR SINE MIR 31 96 -166 2 1428 253 299 73 109 chr13 110623910 110623967 -9660345 - MTE2b LTR MaLR -32 347 301 2 1428 455 0 18 0 chr13 110623967 110624022 -9660290 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 2 1428 253 299 73 109 chr13 110624022 110624129 -9660183 - MTE2b LTR MaLR -79 300 189 2 1428 653 90 186 4 chr13 110624110 110624229 -9660083 + B1_Mur3 SINE Alu 1 134 -15 2 1428 474 301 101 73 chr13 110624155 110624402 -9659910 - MTE2b LTR MaLR -122 257 4 2 1428 25 31 0 0 chr13 110624519 110624551 -9659761 + AT_rich Low_complexity Low_complexity 1 32 0 2 1429 224 220 20 0 chr13 110624775 110624825 -9659487 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1429 261 0 0 0 chr13 110624878 110624907 -9659405 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1429 374 141 13 0 chr13 110624910 110624988 -9659324 - Tigger7 DNA MER2_type -145 2346 2268 2 1429 335 278 95 61 chr13 110625152 110625526 -9658786 - L1M2 LINE L1 -2726 3417 3047 2 1429 204 125 0 0 chr13 110625526 110625558 -9658754 + (CA)n Simple_repeat Simple_repeat 1 32 0 2 1429 246 252 117 70 chr13 110625558 110625597 -9658715 - L1M2 LINE L1 -3100 3046 3000 2 1429 236 305 36 72 chr13 110625568 110625706 -9658606 - L1M2 LINE L1 -3300 2843 2711 2 1429 21 36 0 0 chr13 110625709 110625737 -9658575 + AT_rich Low_complexity Low_complexity 1 28 0 2 1429 388 320 129 51 chr13 110625737 110626304 -9658008 - L1_Rod LINE L1 -3129 2718 2108 2 1429 229 297 78 54 chr13 110626584 110626751 -9657561 - L1_Mur3 LINE L1 -4012 1868 1698 2 1429 212 190 0 23 chr13 110626751 110626794 -9657518 + (CATA)n Simple_repeat Simple_repeat 1 42 0 2 1429 383 311 0 55 chr13 110626915 110627024 -9657288 - PB1D10 SINE Alu -9 108 6 2 1429 233 29 29 0 chr13 110627561 110627595 -9656717 + (CAAAC)n Simple_repeat Simple_repeat 2 36 0 2 1429 374 291 0 18 chr13 110628062 110628174 -9656138 + CT-rich Low_complexity Low_complexity 5 114 0 2 1429 195 351 13 13 chr13 110628288 110628366 -9655946 - MER5A DNA MER1_type -68 121 44 2 1429 230 381 59 15 chr13 110628442 110628578 -9655734 + MIRb SINE MIR 86 227 -41 2 1429 451 321 103 61 chr13 110629036 110629348 -9654964 - MER102c DNA MER1_type -3 328 4 2 1429 300 53 0 0 chr13 110631634 110631672 -9652640 + (CA)n Simple_repeat Simple_repeat 1 38 0 2 1429 414 134 0 0 chr13 110632151 110632218 -9652094 + (TA)n Simple_repeat Simple_repeat 2 68 0 2 1429 705 199 41 28 chr13 110632245 110632390 -9651922 + B1_Mur4 SINE Alu 2 148 -2 2 1429 795 21 0 0 chr13 110632415 110632508 -9651804 + (TTTTC)n Simple_repeat Simple_repeat 2 94 0 2 1429 1200 58 0 0 chr13 110632508 110632645 -9651667 - B1_Mus1 SINE Alu -10 138 2 2 1429 305 332 51 88 chr13 110633843 110634058 -9650254 + MLT1J LTR MaLR 254 460 -52 2 1429 962 149 0 23 chr13 110634798 110634970 -9649342 - B2_Mm2 SINE B2 -26 169 2 2 1429 270 0 0 0 chr13 110636597 110636627 -9647685 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1429 191 36 0 35 chr13 110636763 110636792 -9647520 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2 1429 297 74 0 0 chr13 110636937 110636991 -9647321 - L1Md_F3 LINE L1 0 6584 6531 2 1429 1086 274 77 20 chr13 110637703 110638336 -9645976 - Lx8 LINE L1 -518 6955 6287 2 1429 306 0 0 0 chr13 110638465 110638499 -9645813 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1429 22 0 0 0 chr13 110638575 110638597 -9645715 + AT_rich Low_complexity Low_complexity 1 22 0 2 1429 302 152 17 0 chr13 110639358 110639417 -9644895 + (ATG)n Simple_repeat Simple_repeat 2 61 0 2 1429 243 355 78 18 chr13 110639438 110639647 -9644665 - MIRb SINE MIR -8 260 3 2 1429 22 0 0 0 chr13 110640213 110640235 -9644077 + AT_rich Low_complexity Low_complexity 1 22 0 2 1429 184 316 0 34 chr13 110641275 110641334 -9642978 - MIRm SINE MIR -189 87 31 2 1429 3177 41 0 11 chr13 110641899 110642270 -9642042 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1429 56321 22 16 7 chr13 110642270 110648689 -9635623 + IAPEz-int LTR ERVK 8 6481 0 2 1429 3177 41 0 11 chr13 110648689 110649060 -9635252 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1429 344 254 79 71 chr13 110649136 110649263 -9635049 + MIR SINE MIR 38 165 -43 2 1429 205 250 154 26 chr13 110649828 110649906 -9634406 + L2c LINE L2 3296 3383 -4 2 1429 216 0 0 0 chr13 110650429 110650453 -9633859 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1429 407 184 0 11 chr13 110651294 110651382 -9632930 + GA-rich Low_complexity Low_complexity 2 88 0 2 1429 785 48 19 0 chr13 110652047 110652152 -9632160 + (GAGAA)n Simple_repeat Simple_repeat 3 109 0 2 1429 651 26 0 0 chr13 110652153 110652230 -9632082 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 2 1429 334 329 73 119 chr13 110653391 110653760 -9630552 - ORR1D2 LTR MaLR -13 357 6 2 1429 288 0 0 0 chr13 110654412 110654444 -9629868 + (TA)n Simple_repeat Simple_repeat 2 33 0 2 1429 423 0 0 0 chr13 110654444 110654490 -9629822 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1429 207 0 0 0 chr13 110655108 110655131 -9629181 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 2 1429 576 269 42 21 chr13 110655143 110655287 -9629025 - RSINE1 SINE B4 -15 150 4 2 1429 583 292 85 25 chr13 110655681 110655881 -9628431 - B4A SINE B4 -78 214 3 2 1429 708 80 0 0 chr13 110655931 110656031 -9628281 + (TG)n Simple_repeat Simple_repeat 1 100 0 2 1429 180 0 0 0 chr13 110656071 110656091 -9628221 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2 1429 553 284 22 22 chr13 110656091 110656219 -9628093 - B4 SINE B4 -79 213 83 2 1429 497 144 0 11 chr13 110656219 110656310 -9628002 + CT-rich Low_complexity Low_complexity 3 92 0 2 1429 297 0 0 0 chr13 110657210 110657243 -9627069 + (TTA)n Simple_repeat Simple_repeat 3 35 0 2 1429 28385 63 11 1 chr13 110658130 110662419 -9621893 - L1Md_F2 LINE L1 -2 6580 2245 2 1429 705 237 11 86 chr13 110662834 110663009 -9621303 + RSINE1 SINE B4 4 165 0 2 1429 548 216 4 0 chr13 110663010 110663259 -9621053 + (CA)n Simple_repeat Simple_repeat 1 250 0 2 1429 219 188 0 0 chr13 110663947 110663995 -9620317 + T-rich Low_complexity Low_complexity 1 48 0 2 1429 1251 75 0 0 chr13 110663995 110664142 -9620170 - B1_Mus1 SINE Alu 0 148 2 2 1429 288 0 0 0 chr13 110664248 110664280 -9620032 + (TTTTG)n Simple_repeat Simple_repeat 3 34 0 2 1429 588 14 0 0 chr13 110664767 110664836 -9619476 + (TG)n Simple_repeat Simple_repeat 2 70 0 2 1429 207 0 0 0 chr13 110665079 110665102 -9619210 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1429 189 0 0 0 chr13 110665564 110665585 -9618727 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1429 342 0 0 0 chr13 110665585 110665622 -9618690 + (GA)n Simple_repeat Simple_repeat 2 39 0 2 1429 195 241 119 17 chr13 110665764 110665823 -9618489 + L2 LINE L2 323 387 -3032 2 1429 297 272 98 39 chr13 110665994 110666160 -9618152 - MIRc SINE MIR -87 181 9 2 1429 3973 48 0 4 chr13 110667089 110667572 -9616740 + L1Md_F2 LINE L1 6102 6582 0 2 1429 364 194 11 21 chr13 110668212 110668307 -9616005 + CT-rich Low_complexity Low_complexity 3 96 0 2 1429 1587 179 54 98 chr13 110668308 110668430 -9615882 + MTD LTR MaLR 12 110 -309 2 1429 733 206 7 0 chr13 110668430 110668576 -9615736 - B1_Mus1 SINE Alu 0 148 2 2 1429 1587 179 54 98 chr13 110668576 110668880 -9615432 + MTD LTR MaLR 111 419 0 2 1429 324 0 0 0 chr13 110668915 110668951 -9615361 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1429 549 351 19 35 chr13 110668951 110669256 -9615056 - MLT1A0 LTR MaLR -8 357 56 2 1429 415 314 131 27 chr13 110669273 110669601 -9614711 - L1MB1 LINE L1 -14 6175 5814 2 1429 438 303 45 45 chr13 110669715 110669938 -9614374 - L1M3 LINE L1 -342 5841 5619 2 1429 210 196 18 18 chr13 110670987 110671044 -9613268 + T-rich Low_complexity Low_complexity 1 57 0 2 1429 1178 82 0 10 chr13 110672659 110672868 -9611444 + (TCTA)n Simple_repeat Simple_repeat 1 206 0 2 1429 244 152 0 0 chr13 110672868 110672914 -9611398 - Lx6 LINE L1 -27 7433 7388 2 1429 499 361 47 20 chr13 110674490 110674787 -9609525 - MLT1J LTR MaLR -204 308 4 2 1429 335 270 41 59 chr13 110675538 110675707 -9608605 + Helitron2Na_Mam RC Helitron? 2 167 -157 2 1429 296 224 13 0 chr13 110676402 110676478 -9607834 + (TA)n Simple_repeat Simple_repeat 2 78 0 2 1429 432 181 0 0 chr13 110676478 110676561 -9607751 + (CA)n Simple_repeat Simple_repeat 2 84 0 3 1429 559 258 23 8 chr13 110677340 110677469 -9606843 - MTE2b LTR MaLR -238 141 11 3 1429 282 173 0 0 chr13 110677640 110677715 -9606597 + T-rich Low_complexity Low_complexity 1 75 0 3 1429 1073 50 43 0 chr13 110677716 110677857 -9606455 - B1_Mus1 SINE Alu -1 147 1 3 1429 405 0 0 0 chr13 110677980 110678025 -9606287 + (TTTC)n Simple_repeat Simple_repeat 1 45 0 3 1429 214 294 54 11 chr13 110679364 110679457 -9604855 - MIRc SINE MIR -151 117 21 3 1429 389 245 8 68 chr13 110679514 110679632 -9604680 - PB1D10 SINE Alu -5 112 2 3 1429 306 366 30 36 chr13 110679756 110679923 -9604389 + B4A SINE B4 10 175 -117 3 1429 234 148 0 0 chr13 110680052 110680106 -9604206 + (GA)n Simple_repeat Simple_repeat 2 55 0 3 1429 2061 188 9 55 chr13 110680111 110680551 -9603761 - MTC LTR MaLR -1 420 1 3 1429 225 286 19 9 chr13 110681226 110681332 -9602980 + (TA)n Simple_repeat Simple_repeat 2 108 0 3 1429 346 259 44 11 chr13 110682496 110682586 -9601726 + PB1D10 SINE Alu 18 110 -7 3 1429 281 159 16 0 chr13 110682588 110682651 -9601661 + (CATA)n Simple_repeat Simple_repeat 2 65 0 3 1429 188 348 0 0 chr13 110683332 110683401 -9600911 - MIRb SINE MIR -32 236 168 3 1429 975 80 71 21 chr13 110683582 110683709 -9600603 + B1_Mus1 SINE Alu 1 137 -11 3 1429 252 0 0 0 chr13 110683709 110683737 -9600575 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 3 1429 975 80 71 21 chr13 110683737 110683750 -9600562 + B1_Mus1 SINE Alu 138 148 0 3 1429 2032 95 15 25 chr13 110683828 110684152 -9600160 - ORR1A4 LTR MaLR -8 321 1 3 1429 477 76 0 0 chr13 110684157 110684223 -9600089 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1429 675 282 82 19 chr13 110684239 110684496 -9599816 - B4A SINE B4 -18 274 2 3 1429 198 0 0 0 chr13 110684528 110684550 -9599762 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1429 1026 113 0 0 chr13 110684568 110684792 -9599520 + (TG)n Simple_repeat Simple_repeat 1 224 0 3 1429 468 0 0 0 chr13 110685904 110685956 -9598356 + (GA)n Simple_repeat Simple_repeat 1 52 0 3 1429 818 125 7 0 chr13 110686124 110686268 -9598044 + (TTCTC)n Simple_repeat Simple_repeat 5 149 0 3 1429 22 35 0 0 chr13 110687161 110687190 -9597122 + AT_rich Low_complexity Low_complexity 1 29 0 3 1429 545 83 12 0 chr13 110687597 110687681 -9596631 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 3 1429 345 82 0 0 chr13 110687691 110687740 -9596572 + (TC)n Simple_repeat Simple_repeat 1 49 0 3 1429 671 199 57 0 chr13 110687894 110688035 -9596277 - B1_Mur1 SINE Alu 0 149 1 3 1429 311 308 121 62 chr13 110688486 110688791 -9595521 - MTEb LTR MaLR 0 379 57 3 1429 570 15 0 0 chr13 110689699 110689766 -9594546 + (TC)n Simple_repeat Simple_repeat 2 68 0 3 1429 840 98 0 0 chr13 110692900 110693033 -9591279 + (CA)n Simple_repeat Simple_repeat 1 133 0 3 1429 23 0 0 0 chr13 110693619 110693642 -9590670 + GC_rich Low_complexity Low_complexity 1 23 0 3 1429 180 0 0 0 chr13 110694960 110694980 -9589332 + (TA)n Simple_repeat Simple_repeat 2 21 0 3 1429 24 77 0 0 chr13 110695947 110695999 -9588313 + AT_rich Low_complexity Low_complexity 1 52 0 3 1429 195 146 0 0 chr13 110698437 110698478 -9585834 + (T)n Simple_repeat Simple_repeat 1 41 0 3 1429 183 100 0 0 chr13 110698617 110698647 -9585665 + (TG)n Simple_repeat Simple_repeat 1 30 0 3 1429 321 311 36 36 chr13 110699360 110699500 -9584812 + MIRm SINE MIR 7 146 -130 3 1429 626 247 21 31 chr13 110699535 110699727 -9584585 + ID_B1 SINE B4 2 191 -33 3 1429 234 330 11 21 chr13 110699733 110699826 -9584486 + GA-rich Low_complexity Low_complexity 2 93 0 3 1429 1819 309 66 43 chr13 110701085 110701453 -9582859 + L1MC3 LINE L1 6638 7013 -772 3 1429 221 57 29 0 chr13 110701453 110701488 -9582824 + (CAA)n Simple_repeat Simple_repeat 2 37 0 3 1429 1819 309 66 43 chr13 110701488 110702030 -9582282 + L1MC3 LINE L1 7014 7569 -216 3 1429 27 0 0 0 chr13 110703848 110703875 -9580437 + AT_rich Low_complexity Low_complexity 1 27 0 3 1429 210 238 0 0 chr13 110706133 110706175 -9578137 + CT-rich Low_complexity Low_complexity 1 42 0 3 1429 261 0 0 0 chr13 110706570 110706599 -9577713 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1429 207 69 0 0 chr13 110706683 110706712 -9577600 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 3 1429 418 320 53 15 chr13 110707911 110708117 -9576195 + B3 SINE B2 2 215 -1 3 1429 521 271 66 20 chr13 110708121 110708317 -9575995 + L1_Rod LINE L1 5458 5662 -185 3 1429 978 103 0 19 chr13 110708810 110708968 -9575344 - B2_Mm2 SINE B2 -40 155 1 3 1429 437 267 43 29 chr13 110709279 110709418 -9574894 - B1F SINE Alu 0 149 9 3 1429 1312 57 0 6 chr13 110709448 110709626 -9574686 + B2_Mm2 SINE B2 11 187 -8 3 1429 342 161 0 0 chr13 110710097 110710190 -9574122 + CT-rich Low_complexity Low_complexity 2 94 0 3 1429 312 257 247 53 chr13 110710464 110710727 -9573585 - L1MA6 LINE L1 -7 6293 5980 3 1429 180 111 0 0 chr13 110710878 110710905 -9573407 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1429 294 267 0 82 chr13 110711577 110711687 -9572625 - L1M2 LINE L1 -1865 4278 4178 3 1429 1122 202 125 52 chr13 110711878 110712223 -9572089 - ORR1D2 LTR MaLR 0 370 1 3 1429 237 250 56 56 chr13 110713351 110713423 -9570889 + MIR SINE MIR 18 89 -173 3 1429 2074 268 119 31 chr13 110713883 110714774 -9569538 - RCHARR1 DNA MER1_type -3 971 3 3 1429 225 159 108 31 chr13 110715731 110715796 -9568516 - Tigger7 DNA MER2_type -32 2459 2390 3 1429 280 309 53 11 chr13 110715886 110715981 -9568331 - Tigger7 DNA MER2_type -2375 116 18 3 1429 203 114 23 0 chr13 110718042 110718086 -9566226 + (ATG)n Simple_repeat Simple_repeat 3 47 0 3 1429 333 0 0 0 chr13 110719208 110719245 -9565067 + (CA)n Simple_repeat Simple_repeat 1 37 0 3 1429 1434 182 142 15 chr13 110721878 110722208 -9562104 - MTD LTR MaLR 0 419 48 3 1429 235 177 65 0 chr13 110722208 110722291 -9562021 + (TCTCTG)n Simple_repeat Simple_repeat 1 88 0 3 1429 977 227 31 5 chr13 110722293 110722488 -9561824 - B3 SINE B2 -15 201 2 3 1429 352 136 15 15 chr13 110722488 110722555 -9561757 - MTD LTR MaLR -340 81 15 3 1429 1469 255 75 22 chr13 110722684 110723256 -9561056 - Lx7 LINE L1 -1725 5971 5365 3 1429 354 23 0 0 chr13 110723618 110723661 -9560651 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 3 1429 324 284 0 0 chr13 110724351 110724432 -9559880 - ID4 SINE ID 0 83 3 3 1429 21 0 0 0 chr13 110724540 110724561 -9559751 + AT_rich Low_complexity Low_complexity 1 21 0 3 1429 462 18 0 0 chr13 110725743 110725798 -9558514 + (TC)n Simple_repeat Simple_repeat 2 56 0 3 1429 191 114 29 0 chr13 110725798 110725833 -9558479 + (TTCC)n Simple_repeat Simple_repeat 4 39 0 3 1429 23 0 0 0 chr13 110725851 110725874 -9558438 + AT_rich Low_complexity Low_complexity 1 23 0 3 1429 715 207 61 24 chr13 110725883 110726052 -9558260 + B1_Mur2 SINE Alu 1 298 -13 3 1429 456 35 0 0 chr13 110726114 110726172 -9558140 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1429 504 0 0 0 chr13 110726172 110726227 -9558085 + (GA)n Simple_repeat Simple_repeat 1 56 0 3 1429 542 248 0 8 chr13 110726275 110726393 -9557919 - B3A SINE B2 -80 118 2 3 1429 181 146 73 0 chr13 110727762 110727817 -9556495 + (CTGGGG)n Simple_repeat Simple_repeat 3 61 0 3 1429 299 244 144 25 chr13 110728935 110729053 -9555259 + MER20 DNA MER1_type 37 168 -51 3 1429 207 0 0 0 chr13 110729594 110729617 -9554695 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 3 1429 405 0 0 0 chr13 110731307 110731352 -9552960 + (CA)n Simple_repeat Simple_repeat 1 45 0 3 1429 249 128 0 0 chr13 110733371 110733418 -9550894 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1429 298 162 238 0 chr13 110733567 110733647 -9550665 + PB1D9 SINE Alu 7 105 -15 3 1429 463 293 45 86 chr13 110734287 110734733 -9549579 + MLT2B1 LTR ERVL 39 556 -6 3 1429 1003 296 70 14 chr13 110734745 110735190 -9549122 + ERVL-B4-int LTR ERVL 7 476 -5238 3 1429 569 306 73 80 chr13 110735200 110735299 -9549013 + ERVL-int LTR ERVL 2891 2990 -2767 3 1429 261 0 0 0 chr13 110735299 110735328 -9548984 + (CA)n Simple_repeat Simple_repeat 2 30 0 3 1429 569 306 73 80 chr13 110735328 110735651 -9548661 + ERVL-int LTR ERVL 2991 3309 -2448 3 1429 272 243 0 14 chr13 110735683 110735754 -9548558 + L1M3 LINE L1 3466 3535 -2605 3 1429 450 0 0 0 chr13 110737279 110737329 -9546983 + (TA)n Simple_repeat Simple_repeat 2 51 0 3 1429 917 238 0 45 chr13 110737430 110737654 -9546658 + B3 SINE B2 1 214 -2 3 1429 229 269 62 41 chr13 110738320 110738417 -9545895 - B1F SINE Alu -50 99 1 3 1429 535 315 6 12 chr13 110739005 110739169 -9545143 - RSINE1 SINE B4 -1 164 2 3 1429 363 286 15 64 chr13 110739874 110740076 -9544236 - Lx7 LINE L1 0 7696 7505 3 1429 212 87 0 61 chr13 110742264 110742313 -9541999 + (T)n Simple_repeat Simple_repeat 1 46 0 3 1429 21 0 0 0 chr13 110742773 110742794 -9541518 + GC_rich Low_complexity Low_complexity 1 21 0 3 1429 219 69 0 0 chr13 110744122 110744151 -9540161 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 3 1429 25 51 0 0 chr13 110744984 110745023 -9539289 + AT_rich Low_complexity Low_complexity 1 39 0 3 1429 591 168 0 0 chr13 110746689 110746808 -9537504 + (CA)n Simple_repeat Simple_repeat 2 120 0 3 1429 203 204 0 18 chr13 110746810 110746865 -9537447 + CT-rich Low_complexity Low_complexity 2 55 0 3 1429 556 252 23 0 chr13 110747290 110747421 -9536891 - B1F SINE Alu -7 142 9 3 1429 1198 193 64 4 chr13 110748652 110748781 -9535531 + Lx LINE L1 6390 6518 -136 3 1429 207 69 0 0 chr13 110748781 110748810 -9535502 + (TGGG)n Simple_repeat Simple_repeat 1 29 0 3 1429 1198 193 64 4 chr13 110748810 110748930 -9535382 + Lx LINE L1 6519 6653 -1 3 1429 433 369 52 1 chr13 110749773 110749998 -9534314 + LTR16D LTR ERVL 192 450 -225 3 1429 997 135 27 11 chr13 110750065 110750252 -9534060 + URR1A DNA MER1_type 37 226 0 3 1429 547 300 61 39 chr13 110750899 110750971 -9533341 - B4A SINE B4 -54 238 167 3 1429 849 231 120 131 chr13 110750971 110751354 -9532958 + MTE2b LTR MaLR 1 379 0 4 1429 547 300 61 39 chr13 110751354 110751510 -9532802 - B4A SINE B4 -126 166 5 3 1429 387 0 0 0 chr13 110751936 110751979 -9532333 + (CA)n Simple_repeat Simple_repeat 2 44 0 4 1429 189 147 0 0 chr13 110752298 110752332 -9531980 + (TCC)n Simple_repeat Simple_repeat 1 34 0 4 1429 268 133 33 0 chr13 110752697 110752757 -9531555 + CT-rich Low_complexity Low_complexity 3 64 0 4 1429 370 236 40 10 chr13 110752765 110752903 -9531409 - L1MA5A LINE L1 -438 5862 5724 4 1429 204 231 0 0 chr13 110754085 110754137 -9530175 + CT-rich Low_complexity Low_complexity 2 53 0 4 1429 325 318 24 8 chr13 110754163 110754290 -9530022 - B4A SINE B4 -18 274 146 4 1429 379 360 184 11 chr13 110754485 110754926 -9529386 + L1MEc LINE L1 241 757 -5643 4 178 21792 142 77 13 chr13 110755393 110761147 -9523165 + L1_Mus1 LINE L1 420 6567 0 4 1430 189 0 0 0 chr13 110761922 110761943 -9522369 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 4 1430 282 29 0 0 chr13 110761943 110761978 -9522334 + (CAGAA)n Simple_repeat Simple_repeat 4 38 0 4 1430 223 273 13 25 chr13 110762386 110762465 -9521847 + CT-rich Low_complexity Low_complexity 1 78 0 4 1430 525 32 0 0 chr13 110763560 110763623 -9520689 + (TA)n Simple_repeat Simple_repeat 1 63 0 4 1430 238 319 132 0 chr13 110763978 110764069 -9520243 - ID_B1 SINE B4 -112 112 10 4 1430 274 286 36 0 chr13 110765460 110765572 -9518740 + MER20B DNA MER1_type 221 336 -447 4 1430 286 194 0 15 chr13 110765839 110765907 -9518405 - MLT1A1 LTR MaLR 0 408 342 4 1430 887 331 80 26 chr13 110765907 110766406 -9517906 + Lx8 LINE L1 6940 7465 -8 4 1430 837 187 20 0 chr13 110766532 110766682 -9517630 + B3A SINE B2 2 154 -44 4 1430 552 15 0 0 chr13 110766682 110766747 -9517565 + (CA)n Simple_repeat Simple_repeat 1 65 0 4 1430 583 153 73 127 chr13 110767045 110767210 -9517102 - RMER10B LTR ERVL -46 352 197 4 1430 303 0 0 60 chr13 110767228 110767278 -9517034 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 4 1430 22 0 0 0 chr13 110767722 110767744 -9516568 + AT_rich Low_complexity Low_complexity 1 22 0 4 1430 866 254 201 0 chr13 110768212 110768535 -9515777 + MTD LTR MaLR 18 405 -14 4 1430 1440 273 50 87 chr13 110768548 110769470 -9514842 + MTD-int LTR MaLR 1 1090 -168 4 1430 961 270 84 18 chr13 110769474 110769921 -9514391 + Lx9 LINE L1 5410 5955 -1689 4 1430 737 304 101 18 chr13 110769938 110770440 -9513872 + Lx9 LINE L1 6973 7516 -128 4 1430 531 188 0 0 chr13 110770441 110770553 -9513759 + (TATG)n Simple_repeat Simple_repeat 3 114 0 4 1430 1716 77 4 57 chr13 110770634 110770897 -9513415 + L1Md_F2 LINE L1 6333 6581 -1 4 1430 312 246 86 16 chr13 110770936 110771064 -9513248 + MTD-int LTR MaLR 1116 1252 -6 4 1430 1088 314 58 13 chr13 110771074 110771455 -9512857 + MTD LTR MaLR 6 403 -16 4 1430 409 318 66 4 chr13 110771459 110771702 -9512610 + L1MA4 LINE L1 5655 5912 -388 4 1430 562 173 39 0 chr13 110771930 110772086 -9512226 + GA-rich Low_complexity Low_complexity 4 165 0 4 1430 1082 82 0 0 chr13 110772228 110772363 -9511949 + B1_Mm SINE Alu 1 135 -12 4 1430 726 12 0 0 chr13 110772363 110772446 -9511866 + (GAAA)n Simple_repeat Simple_repeat 2 84 0 4 1430 181 390 83 26 chr13 110772545 110772774 -9511538 + MIRb SINE MIR 23 264 -4 4 1430 259 277 16 16 chr13 110773757 110773798 -9510514 + (TA)n Simple_repeat Simple_repeat 1 42 0 4 1430 486 0 0 0 chr13 110773798 110773852 -9510460 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 4 1430 259 277 16 16 chr13 110773852 110773931 -9510381 + (TA)n Simple_repeat Simple_repeat 2 80 0 4 1430 204 40 0 0 chr13 110774264 110774289 -9510023 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1430 221 57 29 0 chr13 110774347 110774382 -9509930 + (TC)n Simple_repeat Simple_repeat 1 36 0 4 1430 232 358 137 0 chr13 110775073 110775277 -9509035 - MLT1C LTR MaLR -9 458 227 4 1430 679 173 53 0 chr13 110775368 110775501 -9508811 + B1_Mur1 SINE Alu 9 148 -1 4 1430 248 190 67 33 chr13 110775561 110775621 -9508691 - MLT1C LTR MaLR -385 82 21 4 1430 279 0 0 0 chr13 110776572 110776603 -9507709 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1430 218 272 48 24 chr13 110777535 110777618 -9506694 - B1_Mus1 SINE Alu -51 97 13 4 1430 4098 79 3 2 chr13 110778398 110778968 -9505344 - MT2B2 LTR ERVL -13 571 1 4 1430 2565 274 117 17 chr13 110779841 110780778 -9503534 - Lx8 LINE L1 -2 7471 6441 4 1430 1238 277 35 23 chr13 110780789 110781221 -9503091 - Lx7 LINE L1 -1645 6051 5615 4 1430 519 244 84 56 chr13 110781753 110781931 -9502381 - B3A SINE B2 0 198 16 4 1430 1887 153 34 9 chr13 110782059 110782409 -9501903 - RLTR15 LTR ERVK 0 359 1 4 1430 393 22 0 0 chr13 110784104 110784150 -9500162 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1430 488 100 0 36 chr13 110785557 110785626 -9498686 - URR1B DNA MER1_type 0 225 160 4 1430 1378 216 9 29 chr13 110785626 110785974 -9498338 + RLTR15 LTR ERVK 1 341 -18 4 1430 728 176 113 0 chr13 110785990 110786132 -9498180 - URR1B DNA MER1_type -67 158 1 4 1430 351 35 17 34 chr13 110786423 110786482 -9497830 + (TTCC)n Simple_repeat Simple_repeat 3 60 0 4 1430 474 18 0 0 chr13 110787538 110787593 -9496719 + (TG)n Simple_repeat Simple_repeat 2 56 0 4 1430 477 182 27 9 chr13 110788349 110788460 -9495852 + L1MB5 LINE L1 5348 5460 -718 4 1430 748 262 75 72 chr13 110788461 110788782 -9495530 - MT2B LTR ERVL 0 601 280 4 1430 476 227 8 68 chr13 110788780 110788898 -9495414 + ID_B1 SINE B4 114 224 0 4 1430 1108 226 90 10 chr13 110788924 110789214 -9495098 + L1MB5 LINE L1 5515 5827 -347 4 1430 355 251 11 159 chr13 110789219 110789408 -9494904 + RSINE1 SINE B4 5 165 0 4 1430 402 74 0 0 chr13 110789420 110789474 -9494838 + (CA)n Simple_repeat Simple_repeat 2 55 0 4 1430 527 231 130 19 chr13 110789474 110789685 -9494627 + L1MB7 LINE L1 5786 6016 -275 4 1430 569 100 11 0 chr13 110789729 110789819 -9494493 + (TC)n Simple_repeat Simple_repeat 1 91 0 4 1430 461 151 48 12 chr13 110789819 110789987 -9494325 + (CA)n Simple_repeat Simple_repeat 1 174 0 4 1430 241 211 15 22 chr13 110789999 110790135 -9494177 + (CA)n Simple_repeat Simple_repeat 1 135 0 4 1430 180 0 0 0 chr13 110790133 110790153 -9494159 + (CCA)n Simple_repeat Simple_repeat 3 22 0 4 1430 378 271 62 14 chr13 110790302 110790448 -9493864 + L1MD LINE L1 5633 5785 -457 4 1430 854 170 35 0 chr13 110790939 110791080 -9493232 - B1_Mur3 SINE Alu -3 146 1 4 1430 23 0 0 0 chr13 110791080 110791103 -9493209 + AT_rich Low_complexity Low_complexity 1 23 0 4 1430 987 9 0 0 chr13 110791211 110791323 -9492989 + (TC)n Simple_repeat Simple_repeat 1 112 0 4 1430 379 269 278 33 chr13 110791855 110792155 -9492157 - ORR1E LTR MaLR -3 376 3 4 1430 465 257 173 19 chr13 110793494 110793708 -9490604 - Lx8 LINE L1 -9 7464 7218 4 1430 207 241 24 12 chr13 110793710 110793794 -9490518 + CT-rich Low_complexity Low_complexity 1 85 0 4 1430 273 296 14 0 chr13 110793854 110793925 -9490387 - Lx8 LINE L1 -472 7001 6930 4 1430 798 211 33 52 chr13 110793978 110794188 -9490124 - RLTR28B LTR ERVL -275 206 1 4 1430 186 43 0 0 chr13 110794290 110794313 -9489999 + (T)n Simple_repeat Simple_repeat 1 23 0 4 1430 555 329 74 63 chr13 110794824 110795271 -9489041 - MLT1D LTR MaLR -14 491 40 4 1430 21 0 0 0 chr13 110795554 110795575 -9488737 + AT_rich Low_complexity Low_complexity 1 21 0 4 1430 234 243 134 26 chr13 110795735 110795929 -9488383 - MER112 DNA MER1_type -2 259 45 4 1430 284 315 93 33 chr13 110796015 110796166 -9488146 - MLT1F2 LTR MaLR -1 559 400 4 1430 1702 173 41 75 chr13 110796865 110797102 -9487210 - MTB_Mm LTR MaLR -6 401 190 4 1430 5174 78 24 3 chr13 110797102 110797808 -9486504 - Lx3_Mus LINE L1 -14 6995 6275 4 1430 1702 173 41 75 chr13 110797808 110797982 -9486330 - MTB_Mm LTR MaLR -218 189 4 4 1430 346 364 23 8 chr13 110798002 110798132 -9486180 - MLT1F2 LTR MaLR -408 152 21 4 1430 539 269 31 0 chr13 110799231 110799361 -9484951 - RSINE1 SINE B4 -29 136 3 4 1430 305 169 161 14 chr13 110800118 110800227 -9484085 - B2_Mm2 SINE B2 -2 191 47 4 1430 485 66 12 73 chr13 110800274 110800356 -9483956 - B2_Mm1t SINE B2 -14 179 103 4 1430 238 136 23 0 chr13 110800359 110800403 -9483909 + B2_Mm1t SINE B2 32 76 -117 4 1430 841 133 7 27 chr13 110801692 110801839 -9482473 + B1_Mur3 SINE Alu 6 149 0 4 1430 225 263 0 0 chr13 110801942 110801999 -9482313 + MER5A1 DNA MER1_type 1 57 -109 4 1430 297 238 43 95 chr13 110803821 110803937 -9480375 + PB1D9 SINE Alu 2 111 -9 4 1430 369 0 0 0 chr13 110803945 110803986 -9480326 + (TG)n Simple_repeat Simple_repeat 1 41 0 4 1430 660 77 17 8 chr13 110803988 110804106 -9480206 + (GA)n Simple_repeat Simple_repeat 2 120 0 4 1430 321 341 67 27 chr13 110804910 110805133 -9479179 + MIRb SINE MIR 16 247 -21 4 1430 182 290 48 16 chr13 110805221 110805284 -9479028 + L2a LINE L2 3337 3401 -25 4 1430 480 367 15 0 chr13 110805704 110805903 -9478409 - MER63A DNA AcHobo 0 210 9 4 1430 264 297 43 21 chr13 110806367 110806460 -9477852 - MIR SINE MIR -59 203 109 4 1430 266 330 150 0 chr13 110806819 110806992 -9477320 + MLT1J LTR MaLR 1 199 -313 4 1430 936 240 15 0 chr13 110807004 110807204 -9477108 + B3 SINE B2 1 203 -13 4 1430 214 159 45 0 chr13 110807548 110807592 -9476720 + B2_Mm2 SINE B2 3 48 -147 4 1430 189 0 0 0 chr13 110808339 110808360 -9475952 + (CA)n Simple_repeat Simple_repeat 2 22 0 4 1430 211 111 0 27 chr13 110809958 110809995 -9474317 + (CTGGGG)n Simple_repeat Simple_repeat 6 41 0 4 1430 3227 50 166 2 chr13 110810907 110811347 -9472965 - RLTR1B LTR ERV1 0 512 1 4 1430 851 104 0 31 chr13 110811617 110811776 -9472536 + (TTCC)n Simple_repeat Simple_repeat 3 156 0 4 1430 223 100 0 74 chr13 110812346 110812400 -9471912 + (CATA)n Simple_repeat Simple_repeat 1 50 0 4 1430 240 163 0 0 chr13 110812842 110812885 -9471427 + CT-rich Low_complexity Low_complexity 2 44 0 4 1430 914 149 7 26 chr13 110812888 110813040 -9471272 - B1_Mur4 SINE Alu 0 150 2 4 1430 640 166 14 0 chr13 110813128 110813267 -9471045 + (TCTA)n Simple_repeat Simple_repeat 3 143 0 4 1430 3727 32 0 2 chr13 110813586 110814018 -9470294 - L1Md_F2 LINE L1 0 6582 6152 4 1430 387 0 0 0 chr13 110814050 110814093 -9470219 + (TC)n Simple_repeat Simple_repeat 2 44 0 4 1430 328 325 48 9 chr13 110814703 110814887 -9469425 + MIR3 SINE MIR 21 207 -1 5 1430 455 245 0 10 chr13 110815990 110816089 -9468223 - RSINE1 SINE B4 -57 108 11 5 1430 277 280 65 0 chr13 110817039 110817132 -9467180 + MLT1D LTR MaLR 104 202 -303 5 1430 1124 170 14 23 chr13 110817210 110817427 -9466885 + URR1B DNA MER1_type 5 219 -6 5 1430 275 333 74 45 chr13 110817416 110817501 -9466811 + MLT1D LTR MaLR 319 412 -93 5 1430 279 0 0 0 chr13 110817501 110817532 -9466780 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1430 275 333 74 45 chr13 110817532 110817622 -9466690 + MLT1D LTR MaLR 413 499 -6 5 1430 377 269 50 8 chr13 110817791 110817911 -9466401 - Lx8 LINE L1 -362 7111 6987 5 1430 387 299 26 33 chr13 110817931 110818083 -9466229 + RSINE1 SINE B4 12 162 -3 5 1430 1634 115 121 3 chr13 110818404 110818701 -9465611 + IAPEY3_LTR LTR ERVK 1 332 0 5 1430 2794 46 0 31 chr13 110819377 110819734 -9464578 + L1Md_F3 LINE L1 6217 6562 -22 5 1430 2374 83 9 58 chr13 110819828 110820172 -9464140 - ORR1A2 LTR MaLR 0 327 1 5 1430 405 271 0 10 chr13 110820459 110820556 -9463756 - ID_B1 SINE B4 -6 218 123 5 1430 184 289 39 67 chr13 110821941 110822045 -9462267 - MIR SINE MIR -78 184 84 5 1430 201 69 0 0 chr13 110822662 110822668 -9461644 + (T)n Simple_repeat Simple_repeat 1 6 0 5 1430 186 43 0 0 chr13 110822668 110822691 -9461621 + (CACCC)n Simple_repeat Simple_repeat 1 23 0 5 1430 201 69 0 0 chr13 110822691 110822713 -9461599 + (T)n Simple_repeat Simple_repeat 1 22 0 5 1430 355 247 65 60 chr13 110824645 110824813 -9459499 + RLTR23 LTR ERV1 262 430 0 5 1430 883 173 11 8 chr13 110824819 110825082 -9459230 + CT-rich Low_complexity Low_complexity 1 264 0 5 1430 1301 145 87 30 chr13 110825959 110826223 -9458089 + ORR1C1 LTR MaLR 90 368 -10 5 1430 6690 43 1 2 chr13 110826326 110827133 -9457179 - L1Md_F2 LINE L1 0 6582 5777 5 1430 372 155 0 0 chr13 110827700 110827771 -9456541 + G-rich Low_complexity Low_complexity 6 76 0 5 1430 1827 155 52 57 chr13 110827813 110828182 -9456130 + ORR1C1 LTR MaLR 1 367 -11 5 1430 2396 147 70 19 chr13 110828197 110828628 -9455684 + RLTR11B LTR ERVK 1 453 0 5 1430 367 323 113 0 chr13 110830000 110830133 -9454179 + RSINE1 SINE B4 18 165 0 5 1430 230 359 11 0 chr13 110830133 110830225 -9454087 + (CA)n Simple_repeat Simple_repeat 1 93 0 5 1430 21 0 0 0 chr13 110830553 110830574 -9453738 + AT_rich Low_complexity Low_complexity 1 21 0 5 1430 1307 98 11 5 chr13 110831489 110831674 -9452638 + B2_Mm2 SINE B2 1 186 -9 5 1430 4522 12 0 0 chr13 110832257 110832750 -9451562 + MT2_Mm LTR ERVL 1 493 0 5 1430 2181 103 0 0 chr13 110832755 110833074 -9451238 + ORR1A2 LTR MaLR 1 319 -8 5 1430 195 42 0 0 chr13 110833144 110833168 -9451144 + (CCCTAA)n Simple_repeat Simple_repeat 5 28 0 5 1430 345 24 0 0 chr13 110833289 110833331 -9450981 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 5 1430 353 251 166 31 chr13 110833622 110833815 -9450497 - MLT1F1 LTR MaLR -34 535 317 5 1430 948 242 66 37 chr13 110834540 110834888 -9449424 - ORR1E LTR MaLR 0 359 2 5 1430 472 367 31 13 chr13 110835990 110836219 -9448093 - MLT1F2 LTR MaLR -2 558 326 5 1430 728 190 76 18 chr13 110836369 110836540 -9447772 - RMER1C Other Other 0 1342 1162 5 1430 284 305 107 118 chr13 110836627 110836991 -9447321 + MLT1E2 LTR MaLR 52 411 -216 5 1430 792 151 0 0 chr13 110838075 110838254 -9446058 + (CATG)n Simple_repeat Simple_repeat 2 180 0 5 1430 583 190 7 7 chr13 110838272 110838410 -9445902 + GA-rich Low_complexity Low_complexity 3 140 0 5 1430 278 371 0 0 chr13 110838433 110838530 -9445782 - RSINE1 SINE B4 -44 121 25 5 1430 537 231 122 44 chr13 110838606 110838740 -9445572 + B3 SINE B2 1 144 -51 5 1430 423 0 0 0 chr13 110838740 110838787 -9445525 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1430 402 231 122 44 chr13 110838787 110838833 -9445479 + B2_Mm2 SINE B2 145 195 0 5 1430 210 158 0 0 chr13 110839770 110839808 -9444504 + A-rich Low_complexity Low_complexity 2 39 0 5 1430 468 231 0 107 chr13 110840264 110840417 -9443895 - B1_Mur1 SINE Alu -5 144 6 5 1430 457 348 35 0 chr13 110840545 110840686 -9443626 - RSINE1 SINE B4 -17 148 3 5 1430 393 77 0 0 chr13 110841436 110841488 -9442824 + L1_Mus2 LINE L1 6360 6411 -155 5 1430 233 182 71 83 chr13 110841504 110841588 -9442724 + ORR1B1 LTR MaLR 1 83 -311 5 1430 662 110 0 48 chr13 110841591 110841715 -9442597 + L1_Mus4 LINE L1 6519 6636 0 5 1430 1950 153 93 14 chr13 110841851 110842216 -9442096 + ORR1B1 LTR MaLR 1 394 0 5 1430 1213 139 87 0 chr13 110842672 110842880 -9441432 - URR1A DNA MER1_type 0 226 1 5 1430 1110 245 112 31 chr13 110843552 110843936 -9440376 + MTD LTR MaLR 5 419 0 5 1430 257 0 0 29 chr13 110844543 110844577 -9439735 + (TAA)n Simple_repeat Simple_repeat 2 34 0 5 1430 429 20 0 0 chr13 110845874 110845924 -9438388 + (TG)n Simple_repeat Simple_repeat 2 51 0 5 1430 387 0 0 0 chr13 110847028 110847071 -9437241 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1430 1326 78 0 0 chr13 110850319 110850499 -9433813 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 5 1430 751 196 14 0 chr13 110850522 110850660 -9433652 - B1_Mus2 SINE Alu -5 142 3 5 1430 211 158 0 0 chr13 110851319 110851357 -9432955 - PB1D10 SINE Alu -45 72 35 5 1430 300 146 0 0 chr13 110851585 110851633 -9432679 + HAL1-3A_ME LINE L1 1976 2023 -835 5 1430 2328 60 3 3 chr13 110854590 110854909 -9429403 + ORR1A2 LTR MaLR 1 319 -8 5 1430 471 300 66 13 chr13 110855134 110855286 -9429026 - RSINE1 SINE B4 -2 163 4 5 1430 4978 163 30 119 chr13 110858133 110859157 -9425155 + RLTR21 LTR ERVK 1 944 -628 5 1430 3602 147 90 2 chr13 110859157 110859778 -9424534 + RLTR33 LTR ERVK 1 676 -2 5 1430 4978 162 21 84 chr13 110859778 110860094 -9424218 + RLTR21 LTR ERVK 945 1255 -149 5 1430 666 91 0 0 chr13 110860101 110860200 -9424112 + (TA)n Simple_repeat Simple_repeat 2 100 0 5 1430 270 0 0 0 chr13 110860200 110860229 -9424083 + (TG)n Simple_repeat Simple_repeat 1 30 0 5 1430 237 203 62 0 chr13 110860246 110860310 -9424002 + RMER12B LTR ERVK 1160 1227 -177 5 1430 900 145 0 2 chr13 110860312 110860743 -9423569 + (TGAG)n Simple_repeat Simple_repeat 1 430 0 5 1430 2088 83 3 17 chr13 110861366 110861661 -9422651 - L1_Mus2 LINE L1 -1 6565 6275 5 1430 456 19 0 0 chr13 110863780 110863833 -9420479 + (TC)n Simple_repeat Simple_repeat 2 54 0 5 1430 577 234 127 27 chr13 110864178 110864398 -9419914 + Tigger5 DNA MER2_type 2165 2406 0 5 1430 198 0 0 0 chr13 110864847 110864869 -9419443 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 5 1430 1177 41 0 40 chr13 110865474 110865626 -9418686 + B1_Mm SINE Alu 2 147 0 5 1430 333 0 0 0 chr13 110866387 110866424 -9417888 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1430 1217 247 89 8 chr13 110866819 110867191 -9417121 + MTD LTR MaLR 18 419 0 5 1430 291 54 0 0 chr13 110867228 110867265 -9417047 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1430 1468 151 4 31 chr13 110868006 110868266 -9416046 + Lx4A LINE L1 6806 7058 0 5 1430 318 50 0 0 chr13 110868345 110868385 -9415927 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 5 1430 327 78 0 0 chr13 110869315 110869366 -9414946 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1430 3040 72 8 0 chr13 110869742 110870132 -9414180 + L1_Mus1 LINE L1 6174 6566 -1 5 1430 4426 12 0 0 chr13 110870884 110871366 -9412946 + LTRIS_Mm LTR ERV1 1 482 0 5 1430 500 111 44 44 chr13 110873867 110874047 -9410265 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1430 574 134 45 28 chr13 110874090 110874266 -9410046 + (CA)n Simple_repeat Simple_repeat 1 179 0 5 1430 212 242 14 57 chr13 110874658 110874728 -9409584 + BC1_Mm scRNA scRNA 14 80 -72 5 1430 281 351 21 0 chr13 110874846 110874940 -9409372 + MER81 DNA AcHobo 19 114 0 5 1430 322 345 119 0 chr13 110875236 110875413 -9408899 - MIR SINE MIR -47 215 18 5 1430 34599 71 7 5 chr13 110875997 110881154 -9403158 + L1Md_F2 LINE L1 422 5586 -297 5 1430 8309 49 1 0 chr13 110881154 110882149 -9402163 + L1Md_F2 LINE L1 5587 6582 0 5 1430 1961 155 70 8 chr13 110882193 110882551 -9401761 + ORR1C2 LTR MaLR 5 384 0 5 1430 34 24 0 0 chr13 110883147 110883188 -9401124 + AT_rich Low_complexity Low_complexity 1 41 0 5 1430 212 0 0 35 chr13 110883188 110883217 -9401095 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 5 1430 252 250 28 56 chr13 110884320 110884392 -9399920 - ID4_ SINE ID -13 70 1 5 1430 387 0 0 0 chr13 110885338 110885381 -9398931 + (TC)n Simple_repeat Simple_repeat 1 43 0 5 1430 264 268 78 44 chr13 110885619 110885709 -9398603 + RSINE1 SINE B4 38 130 -35 5 1430 315 0 0 0 chr13 110885712 110885747 -9398565 + (CA)n Simple_repeat Simple_repeat 2 36 0 5 1430 510 93 0 0 chr13 110885747 110885833 -9398479 + (GA)n Simple_repeat Simple_repeat 1 86 0 5 1430 798 235 58 29 chr13 110886679 110886885 -9397427 - B3 SINE B2 -2 214 3 5 1431 275 276 26 118 chr13 110887169 110887471 -9396841 + MTEa LTR MaLR 97 379 0 5 1431 686 303 32 12 chr13 110887717 110887964 -9396348 + LTR16C LTR ERVL 1 252 -237 5 1431 1372 211 61 47 chr13 110888291 110888654 -9395658 + ORR1D2 LTR MaLR 3 370 0 5 1431 234 336 54 9 chr13 110889709 110889820 -9394492 - MIR3 SINE MIR -50 158 43 5 1431 551 242 194 11 chr13 110890221 110890401 -9393911 - ID_B1 SINE B4 -9 215 3 5 1431 571 250 120 35 chr13 110890975 110891357 -9392955 - Lx9 LINE L1 -1537 6107 5673 5 1431 2002 255 117 55 chr13 110891362 110892040 -9392272 + Lx9 LINE L1 6781 7471 -173 5 1431 225 108 0 0 chr13 110892040 110892077 -9392235 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1431 2002 255 117 55 chr13 110892077 110892212 -9392100 + Lx9 LINE L1 7472 7643 -1 5 1431 408 82 0 0 chr13 110894334 110894395 -9389917 + (TG)n Simple_repeat Simple_repeat 2 62 0 5 1431 436 301 44 0 chr13 110894401 110894514 -9389798 - RSINE1 SINE B4 -22 143 26 6 1431 231 293 57 65 chr13 110894877 110895001 -9389311 - MLT1A LTR MaLR 0 374 252 6 1431 278 317 0 54 chr13 110895028 110895158 -9389154 - MLT1A LTR MaLR -223 151 29 6 1431 1444 202 94 14 chr13 110895375 110895726 -9388586 + RLTR30 LTR ERV1 1 379 0 6 1431 35 0 0 0 chr13 110896229 110896264 -9388048 + AT_rich Low_complexity Low_complexity 1 35 0 6 1431 514 220 28 0 chr13 110896421 110896530 -9387782 + PB1D10 SINE Alu 6 117 0 6 1431 299 298 0 0 chr13 110897121 110897205 -9387107 + MLT1A LTR MaLR 35 118 -256 6 1431 2058 284 41 44 chr13 110897323 110898147 -9386165 + Lx9 LINE L1 6636 7457 -187 6 1431 369 0 0 0 chr13 110898148 110898189 -9386123 + (TG)n Simple_repeat Simple_repeat 1 41 0 6 1431 2081 88 27 59 chr13 110898239 110898576 -9385736 - ORR1A4 LTR MaLR -3 326 1 6 1431 621 145 30 0 chr13 110898887 110899018 -9385294 + CT-rich Low_complexity Low_complexity 2 136 0 6 1431 270 259 113 26 chr13 110899029 110899144 -9385168 - PB1 SINE Alu -2 125 1 6 1431 399 274 0 12 chr13 110899388 110899473 -9384839 + B3A SINE B2 29 112 -86 6 1431 522 0 0 132 chr13 110899495 110899783 -9384529 + (TA)n Simple_repeat Simple_repeat 1 249 0 6 1431 380 137 26 79 chr13 110899785 110899975 -9384337 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 6 1431 231 218 19 47 chr13 110899905 110900011 -9384301 + (TA)n Simple_repeat Simple_repeat 1 103 0 6 1431 484 146 42 6 chr13 110900023 110900188 -9384124 + (TA)n Simple_repeat Simple_repeat 2 172 0 6 1431 333 0 0 0 chr13 110900238 110900275 -9384037 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1431 508 256 68 10 chr13 110900566 110900827 -9383485 - ORR1E LTR MaLR -1 420 28 6 1431 591 67 104 19 chr13 110901455 110901561 -9382751 - B1_Mur3 SINE Alu -1 148 34 6 1431 221 0 35 0 chr13 110901865 110901894 -9382418 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 6 1431 229 288 45 15 chr13 110902986 110903053 -9381259 + MLT1I LTR MaLR 70 138 -273 6 1431 3045 69 96 0 chr13 110904629 110905035 -9379277 + L1_Mus1 LINE L1 6123 6567 0 6 1431 270 269 0 0 chr13 110906061 110906113 -9378199 + ID4 SINE ID 5 56 -27 6 1431 399 89 0 0 chr13 110906409 110906465 -9377847 + (CAG)n Simple_repeat Simple_repeat 1 56 0 6 1431 727 247 13 35 chr13 110908797 110909024 -9375288 - ID_B1 SINE B4 -1 223 2 6 1431 182 75 0 130 chr13 110909512 110909558 -9374754 + T-rich Low_complexity Low_complexity 1 40 0 6 1431 250 213 0 0 chr13 110909649 110909696 -9374616 - ORR1C2 LTR MaLR 0 384 338 6 1431 334 276 70 20 chr13 110910236 110910336 -9373976 - B1F SINE Alu -32 117 13 6 1431 31 0 0 0 chr13 110910423 110910454 -9373858 + AT_rich Low_complexity Low_complexity 1 31 0 6 1431 975 131 0 24 chr13 110910462 110910626 -9373686 + B2_Mm2 SINE B2 2 161 -34 6 1431 369 0 0 0 chr13 110910626 110910667 -9373645 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 6 1431 952 199 80 19 chr13 110910673 110910911 -9373401 - ORR1C2 LTR MaLR -59 325 55 6 1431 217 320 135 80 chr13 110912474 110912637 -9371675 + B4A SINE B4 3 174 -118 6 1431 243 238 78 16 chr13 110912653 110912717 -9371595 + RSINE1 SINE B4 85 152 -13 6 1431 273 200 0 44 chr13 110913275 110913343 -9370969 + L1MA4 LINE L1 5863 5927 -373 6 1431 198 0 0 0 chr13 110913413 110913435 -9370877 + (TAA)n Simple_repeat Simple_repeat 1 22 0 6 1431 234 187 35 184 chr13 110913825 110913900 -9370412 - PB1D9 SINE Alu -7 110 1 6 1431 246 78 53 105 chr13 110913900 110913957 -9370355 - ID_B1 SINE B4 -89 135 82 6 1431 25 0 0 0 chr13 110915602 110915627 -9368685 + AT_rich Low_complexity Low_complexity 1 25 0 6 1431 382 329 7 0 chr13 110916249 110916392 -9367920 + MER5B DNA MER1_type 20 163 -15 6 1431 307 286 27 45 chr13 110916592 110916702 -9367610 + MIRb SINE MIR 20 127 -141 6 1431 411 83 0 0 chr13 110918376 110918436 -9365876 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1431 264 260 106 0 chr13 110919129 110919233 -9365079 + MamGypLTR1c LTR Gypsy 131 245 -558 6 1431 360 0 0 0 chr13 110920510 110920550 -9363762 + (TC)n Simple_repeat Simple_repeat 1 40 0 6 1431 867 77 54 0 chr13 110920550 110920718 -9363594 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 6 1431 1233 79 28 0 chr13 110920733 110920985 -9363327 + (TCTA)n Simple_repeat Simple_repeat 1 258 0 6 1431 1270 65 5 14 chr13 110920996 110921214 -9363098 + (TCTA)n Simple_repeat Simple_repeat 1 215 0 6 1431 354 45 0 0 chr13 110921497 110921541 -9362771 + (CATA)n Simple_repeat Simple_repeat 3 46 0 6 1431 409 73 0 0 chr13 110922422 110922477 -9361835 - ORR1A2 LTR MaLR 0 346 292 6 1431 7485 43 0 14 chr13 110922477 110923389 -9360923 - L1Md_F2 LINE L1 -1 6581 5683 6 1431 231 36 0 0 chr13 110923389 110923417 -9360895 + L1_Mm LINE L1 4903 4930 -953 6 1431 1847 125 18 0 chr13 110923417 110923697 -9360615 - ORR1A2 LTR MaLR -41 286 2 6 1431 325 324 70 5 chr13 110924000 110924186 -9360126 + B3A SINE B2 1 198 0 6 1431 736 172 124 15 chr13 110924319 110924520 -9359792 + Lx9 LINE L1 7400 7622 -22 6 1431 227 333 120 31 chr13 110925672 110925864 -9358448 - L2c LINE L2 -64 3323 3115 6 1431 311 256 49 0 chr13 110926275 110926357 -9357955 - PB1D10 SINE Alu -6 111 26 6 1431 1896 175 71 8 chr13 110926833 110927213 -9357099 - MTC LTR MaLR -17 404 1 6 1431 1745 152 104 9 chr13 110927384 110927729 -9356583 - ORR1B1 LTR MaLR -16 378 1 6 1431 626 258 0 26 chr13 110927729 110927884 -9356428 - Lx6 LINE L1 -126 7334 7184 6 1431 1041 137 6 6 chr13 110927876 110928045 -9356267 + L1_Mur2 LINE L1 4354 4522 -1355 6 1431 288 312 28 60 chr13 110928054 110928241 -9356071 + MER102b DNA MER1_type 68 263 -78 6 1431 197 159 0 22 chr13 110928562 110928607 -9355705 + GA-rich Low_complexity Low_complexity 4 47 0 6 1431 233 163 20 0 chr13 110930784 110930833 -9353479 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 6 1431 525 266 166 0 chr13 110930835 110931004 -9353308 - B3A SINE B2 0 198 2 6 1431 303 71 0 0 chr13 110932651 110932693 -9351619 + (TC)n Simple_repeat Simple_repeat 1 42 0 6 1431 1072 43 65 7 chr13 110932870 110933009 -9351303 - B1_Mm SINE Alu 0 147 1 6 1431 213 236 67 11 chr13 110933029 110933119 -9351193 + L2a LINE L2 2328 2422 -997 6 1431 241 353 78 39 chr13 110933514 110933694 -9350618 + MLT1A1 LTR MaLR 27 213 -195 6 1431 367 299 0 17 chr13 110933713 110933832 -9350480 + MLT1A1 LTR MaLR 292 408 0 6 1431 306 148 0 0 chr13 110934167 110934221 -9350091 + (TG)n Simple_repeat Simple_repeat 2 55 0 6 1431 188 67 33 0 chr13 110934216 110934246 -9350066 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 6 1431 447 35 0 0 chr13 110934253 110934310 -9350002 + (CTAA)n Simple_repeat Simple_repeat 1 57 0 6 1431 222 286 206 7 chr13 110934922 110935063 -9349249 + L2a LINE L2 3241 3409 -17 6 1431 195 227 0 0 chr13 110935323 110935367 -9348945 + L2b LINE L2 3332 3375 0 6 1431 180 0 0 0 chr13 110936226 110936246 -9348066 + (TTG)n Simple_repeat Simple_repeat 3 22 0 6 1431 17220 4 0 0 chr13 110936408 110939000 -9345312 - L1Md_A LINE L1 0 6582 3991 6 1431 1092 119 0 0 chr13 110939139 110939357 -9344955 + (TG)n Simple_repeat Simple_repeat 1 218 0 6 1431 180 200 0 0 chr13 110939358 110939398 -9344914 + (CGTG)n Simple_repeat Simple_repeat 2 41 0 6 1431 244 317 142 71 chr13 110939635 110940015 -9344297 + LTR37A LTR ERV1 17 423 -3 6 1431 360 186 172 18 chr13 110940263 110940476 -9343836 + MER33 DNA MER1_type 4 249 -75 6 1431 474 191 0 0 chr13 110940860 110940996 -9343316 + (TG)n Simple_repeat Simple_repeat 1 136 0 6 1431 792 174 2 0 chr13 110941019 110941469 -9342843 + (TG)n Simple_repeat Simple_repeat 1 451 0 6 1431 185 216 0 0 chr13 110942292 110942329 -9341983 - L4 LINE RTE -1164 865 829 6 1431 2253 153 25 0 chr13 110942654 110943013 -9341299 + Lx5 LINE L1 6680 7047 -3 6 1431 4542 12 0 0 chr13 110943351 110943844 -9340468 + MT2_Mm LTR ERVL 1 493 0 6 1431 396 0 0 0 chr13 110943970 110944014 -9340298 + (GA)n Simple_repeat Simple_repeat 1 44 0 6 1431 258 264 21 42 chr13 110945153 110945248 -9339064 + L2a LINE L2 3334 3426 0 6 1431 401 376 126 4 chr13 110945387 110945857 -9338455 + L1MC4 LINE L1 7152 7678 -364 6 1431 249 297 33 0 chr13 110945976 110946067 -9338245 + L1MC4 LINE L1 7797 7890 -152 6 1431 306 50 0 0 chr13 110946085 110946125 -9338187 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1431 204 214 32 106 chr13 110946347 110946441 -9337871 + MIRc SINE MIR 160 246 -22 6 1431 211 259 0 18 chr13 110947579 110947634 -9336678 - L2c LINE L2 -14 3373 3320 6 1431 620 258 36 48 chr13 110947638 110947805 -9336507 + B3A SINE B2 2 166 -32 6 1431 224 307 55 24 chr13 110947992 110948123 -9336189 - PB1 SINE Alu -11 138 2 6 1431 311 330 113 0 chr13 110948171 110948277 -9336035 + PB1 SINE Alu 1 118 -9 6 1431 234 91 0 0 chr13 110948592 110948625 -9335687 + (ATG)n Simple_repeat Simple_repeat 1 33 0 6 1431 579 29 0 0 chr13 110948625 110948694 -9335618 + (TG)n Simple_repeat Simple_repeat 1 69 0 6 1431 426 288 23 39 chr13 110948699 110948829 -9335483 - RSINE1 SINE B4 -35 130 3 6 1431 4709 55 0 0 chr13 110951095 110951675 -9332637 - L1Md_F2 LINE L1 -12 6570 5991 6 1431 257 169 0 17 chr13 110952119 110952179 -9332133 + T-rich Low_complexity Low_complexity 6 64 0 6 1431 21 36 0 0 chr13 110952496 110952524 -9331788 + AT_rich Low_complexity Low_complexity 1 28 0 6 1431 1169 43 0 7 chr13 110953413 110953553 -9330759 - B1_Mm SINE Alu -8 139 1 6 1431 1364 77 11 11 chr13 110954494 110954678 -9329634 + B2_Mm1t SINE B2 2 185 -8 6 1431 227 267 17 0 chr13 110955402 110955462 -9328850 + GA-rich Low_complexity Low_complexity 2 62 0 6 1431 256 306 130 40 chr13 110955698 110955875 -9328437 - MER53 DNA hAT 0 193 1 6 1431 4435 76 3 17 chr13 110955885 110956473 -9327839 + L1_Mus3 LINE L1 6057 6636 -2 6 1431 54 56 0 0 chr13 110960224 110960313 -9323999 + AT_rich Low_complexity Low_complexity 1 89 0 6 1431 347 357 116 30 chr13 110960429 110960833 -9323479 + MER77 LTR ERVL 144 582 -25 6 1431 279 352 113 6 chr13 110960788 110960965 -9323347 + MER21B LTR ERV1 503 698 -165 6 1431 468 268 26 18 chr13 110962719 110962833 -9321479 + B4 SINE B4 136 250 -42 7 1431 216 0 0 0 chr13 110962854 110962878 -9321434 + (CA)n Simple_repeat Simple_repeat 2 25 0 7 1431 243 79 0 0 chr13 110962926 110962964 -9321348 + (T)n Simple_repeat Simple_repeat 1 38 0 7 1431 187 390 72 31 chr13 110963394 110963785 -9320527 - L2a LINE L2 -1 3425 3019 7 1431 369 350 70 13 chr13 110963892 110964121 -9320191 - L2a LINE L2 -506 2913 2672 7 1431 354 298 101 0 chr13 110964151 110964339 -9319973 + MLT1B LTR MaLR 21 227 -163 7 1431 457 355 71 29 chr13 110964367 110964648 -9319664 - ORR1E LTR MaLR -52 307 15 7 1431 1009 323 47 89 chr13 110964797 110965334 -9318978 - MER82 DNA MER2_type -132 521 8 7 1431 261 253 24 0 chr13 110967164 110967247 -9317065 + L1MB3 LINE L1 6092 6176 -7 7 1431 186 342 13 0 chr13 110968934 110969010 -9315302 - L2 LINE L2 -1061 2358 2282 7 1431 241 315 27 0 chr13 110969639 110969712 -9314600 - L1M5 LINE L1 -1270 4876 4802 7 1431 367 272 19 0 chr13 110969939 110970101 -9314211 + (TATATG)n Simple_repeat Simple_repeat 6 170 0 7 1431 494 322 52 42 chr13 110970681 110970872 -9313440 - MER58A DNA MER1_type -30 194 2 7 1431 608 94 21 0 chr13 110971502 110971598 -9312714 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 7 1431 322 353 29 7 chr13 110974076 110974196 -9310116 + MLT1C LTR MaLR 65 187 -280 7 1431 412 304 43 65 chr13 110974196 110974382 -9309930 + B3A SINE B2 1 182 -16 7 1431 322 353 29 7 chr13 110974382 110974398 -9309914 + MLT1C LTR MaLR 188 203 -264 7 1431 238 250 0 0 chr13 110974398 110974450 -9309862 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1431 23 0 0 0 chr13 110975801 110975824 -9308488 + AT_rich Low_complexity Low_complexity 1 23 0 7 1431 189 337 0 0 chr13 110976764 110976862 -9307450 + T-rich Low_complexity Low_complexity 17 114 0 7 1431 562 247 46 50 chr13 110976967 110977206 -9307106 - L1MC1 LINE L1 0 6333 6096 7 1431 1680 202 86 8 chr13 110978675 110979060 -9305252 - MTD LTR MaLR 0 419 5 7 1431 525 228 8 26 chr13 110979650 110979767 -9304545 - B1_Mus2 SINE Alu -31 116 2 7 1431 21 0 0 0 chr13 110979797 110979818 -9304494 + AT_rich Low_complexity Low_complexity 1 21 0 7 1431 269 273 15 29 chr13 110980744 110980812 -9303500 + MIRm SINE MIR 83 149 -127 7 1431 947 131 93 33 chr13 110980835 110980999 -9303313 + B2_Mm2 SINE B2 2 177 -18 7 1431 216 0 0 0 chr13 110980999 110981023 -9303289 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 7 1431 947 131 93 33 chr13 110981023 110981040 -9303272 + B2_Mm2 SINE B2 178 194 -1 7 1431 180 77 0 0 chr13 110982418 110982444 -9301868 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 7 1431 23 33 0 0 chr13 110983274 110983304 -9301008 + AT_rich Low_complexity Low_complexity 1 30 0 7 1431 189 323 111 16 chr13 110983825 110983951 -9300361 + MIR3 SINE MIR 15 152 -56 7 1431 2986 197 34 34 chr13 110984253 110984910 -9299402 + RMER13A LTR ERVK 1 803 -57 7 1431 230 210 21 14 chr13 110985618 110985766 -9298546 + GA-rich Low_complexity Low_complexity 1 149 0 7 1431 187 221 174 14 chr13 110985914 110985983 -9298329 + L3 LINE CR1 707 786 -3703 7 1431 498 311 197 24 chr13 110986399 110986774 -9297538 + MLT1D LTR MaLR 44 483 -22 7 1431 229 82 20 20 chr13 110986844 110986894 -9297418 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 7 1431 1135 28 35 7 chr13 110986894 110987037 -9297275 - B1_Mus2 SINE Alu 0 147 1 7 1431 210 105 0 0 chr13 110988545 110988583 -9295729 + (A)n Simple_repeat Simple_repeat 1 38 0 7 1431 483 63 0 0 chr13 110990993 110991056 -9293256 + (CA)n Simple_repeat Simple_repeat 2 64 0 7 1431 467 344 6 36 chr13 110992873 110993039 -9291273 - RSINE1 SINE B4 -2 163 3 7 1431 207 0 0 0 chr13 110993296 110993319 -9290993 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1431 473 291 29 46 chr13 110993571 110993744 -9290568 + MLT1D LTR MaLR 25 194 -311 7 1431 634 207 7 14 chr13 110994437 110994579 -9289733 + RMER10A LTR ERVL 302 442 0 7 1431 396 0 0 0 chr13 110994807 110994851 -9289461 + (TCTA)n Simple_repeat Simple_repeat 2 45 0 7 1431 926 62 0 0 chr13 110994851 110994981 -9289331 + ORR1A1 LTR MaLR 2 131 -215 7 1431 228 67 0 0 chr13 110994982 110995012 -9289300 + (TCTA)n Simple_repeat Simple_repeat 1 30 0 7 1431 780 42 0 0 chr13 110995155 110995251 -9289061 + (TTC)n Simple_repeat Simple_repeat 2 97 0 7 1431 450 114 0 0 chr13 110995717 110995787 -9288525 + (TA)n Simple_repeat Simple_repeat 2 71 0 7 1431 1022 186 95 20 chr13 110996099 110996461 -9287851 - Lx7 LINE L1 -1850 5846 5430 7 1431 2006 236 62 36 chr13 110996449 110997034 -9287278 + Lx7 LINE L1 6815 7414 -282 7 1431 437 76 15 0 chr13 110997061 110997127 -9287185 + (TATG)n Simple_repeat Simple_repeat 4 70 0 7 1431 224 333 49 12 chr13 110997866 110997948 -9286364 + PB1D10 SINE Alu 2 86 -31 7 1431 315 49 0 0 chr13 110998319 110998360 -9285952 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 7 1431 439 335 42 116 chr13 110998453 110998814 -9285498 + MLT1C LTR MaLR 3 336 -54 7 1431 527 257 72 26 chr13 110999204 110999356 -9284956 - B3 SINE B2 0 216 58 7 1431 428 259 0 35 chr13 110999777 110999893 -9284419 - Lx4B LINE L1 -778 6280 6169 7 1431 383 309 18 53 chr13 111000757 111000928 -9283384 + MIR SINE MIR 39 203 -59 1 1431 1191 127 141 5 chr13 111001017 111001215 -9283097 + URR1B DNA MER1_type 1 225 0 2 1431 245 314 68 10 chr13 111002278 111002381 -9281931 - Lx8 LINE L1 -1562 5911 5803 3 1431 670 299 71 34 chr13 111002369 111002867 -9281445 - L1_Mur2 LINE L1 -750 5547 5020 4 1431 903 226 16 5 chr13 111004206 111004393 -9279919 + ORR1C2 LTR MaLR 196 384 0 5 1431 225 241 0 36 chr13 111004545 111004564 -9279748 + polypurine Low_complexity Low_complexity 3 20 0 6 1431 1231 68 7 0 chr13 111004564 111004710 -9279602 + B1_Mus1 SINE Alu 1 147 -1 7 1431 225 241 0 36 chr13 111004710 111004746 -9279566 + polypurine Low_complexity Low_complexity 21 56 0 8 1431 1088 128 6 0 chr13 111004747 111004926 -9279386 + (GAAAA)n Simple_repeat Simple_repeat 1 180 0 9 1431 1375 70 5 5 chr13 111006384 111006811 -9277501 + (TCTA)n Simple_repeat Simple_repeat 1 427 0 1 1431 554 273 7 7 chr13 111006812 111006956 -9277356 + Lx8 LINE L1 7139 7282 -191 1 1431 746 243 188 15 chr13 111007409 111007681 -9276631 + Lx8 LINE L1 6935 7253 -220 1 1431 4655 68 11 2 chr13 111007681 111008251 -9276061 + L1_Mus3 LINE L1 6061 6635 -3 1 1431 336 176 0 0 chr13 111008298 111008349 -9275963 + Lx8 LINE L1 7239 7289 -184 1 1431 187 148 0 0 chr13 111009206 111009233 -9275079 + MER5B DNA MER1_type 90 116 -62 1 1431 921 19 0 0 chr13 111010040 111010147 -9274165 + (CA)n Simple_repeat Simple_repeat 2 108 0 1 1431 943 74 8 0 chr13 111010819 111010941 -9273371 - B1_Mus1 SINE Alu -17 131 9 1 1431 197 108 0 26 chr13 111011267 111011305 -9273007 + (GGAA)n Simple_repeat Simple_repeat 4 40 0 1 1431 549 229 10 103 chr13 111012301 111012534 -9271778 - L1MA7 LINE L1 -30 6261 6051 1 1431 313 306 138 65 chr13 111012640 111013104 -9271208 - L1MC4 LINE L1 -3865 2350 1853 1 1431 365 326 69 88 chr13 111013110 111013416 -9270896 + B4 SINE B4 2 280 -12 2 1431 468 0 0 0 chr13 111013418 111013470 -9270842 + (CA)n Simple_repeat Simple_repeat 2 53 0 2 1431 246 278 19 58 chr13 111013559 111013662 -9270650 - ID4 SINE ID -53 99 1 2 1431 207 69 0 0 chr13 111014514 111014543 -9269769 + (T)n Simple_repeat Simple_repeat 1 29 0 2 1431 46 62 0 0 chr13 111015636 111015717 -9268595 + AT_rich Low_complexity Low_complexity 1 81 0 2 1431 6478 40 4 3 chr13 111017129 111017876 -9266436 + L1Md_F2 LINE L1 5833 6580 -2 2 1432 357 62 0 0 chr13 111018119 111018167 -9266145 + (CA)n Simple_repeat Simple_repeat 1 48 0 2 1432 236 216 118 0 chr13 111018560 111018611 -9265701 + ID4_ SINE ID 11 67 -16 2 1432 843 56 0 0 chr13 111019196 111019303 -9265009 + B1_Mm SINE Alu 41 147 0 2 1432 465 174 0 0 chr13 111019304 111019436 -9264876 + A-rich Low_complexity Low_complexity 1 132 0 2 1432 26 50 0 0 chr13 111022102 111022142 -9262170 + AT_rich Low_complexity Low_complexity 1 40 0 3 1432 1305 260 48 24 chr13 111022275 111022610 -9261702 - MTE2b LTR MaLR -36 343 1 3 1432 241 332 32 66 chr13 111022618 111022793 -9261519 + MIR SINE MIR 21 188 -80 3 1432 414 319 17 17 chr13 111024168 111024286 -9260026 - RSINE1 SINE B4 -32 133 16 3 1432 5997 125 24 0 chr13 111024560 111025443 -9258869 - L1VL4 LINE L1 -5386 916 13 3 1432 1176 277 15 42 chr13 111025463 111025606 -9258706 - MTE2a LTR MaLR 0 379 240 3 1432 3108 59 67 3 chr13 111025606 111025982 -9258330 - MTB LTR MaLR 0 400 1 3 1432 1176 290 27 45 chr13 111025982 111026243 -9258069 - MTE2a LTR MaLR -138 281 13 3 1432 360 315 44 37 chr13 111028351 111028486 -9255826 + B1F1 SINE Alu 12 147 -2 3 1432 415 291 67 178 chr13 111028618 111029023 -9255289 + MLT1A0 LTR MaLR 1 360 -5 3 1432 207 0 0 0 chr13 111029136 111029159 -9255153 + (TG)n Simple_repeat Simple_repeat 2 24 0 3 1432 443 18 18 0 chr13 111029960 111030016 -9254296 + (TC)n Simple_repeat Simple_repeat 2 58 0 4 1432 405 0 0 0 chr13 111030016 111030060 -9254252 + (TA)n Simple_repeat Simple_repeat 2 46 0 4 1432 226 272 41 61 chr13 111030068 111030166 -9254146 + L1MA4 LINE L1 5844 5939 -361 4 1432 369 109 0 0 chr13 111030173 111030228 -9254084 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1432 227 301 11 21 chr13 111030266 111030361 -9253951 + GA-rich Low_complexity Low_complexity 1 94 0 4 1432 861 299 46 21 chr13 111032310 111032635 -9251677 - MER2 DNA MER2_type -12 333 1 4 1432 21 36 0 0 chr13 111034795 111034823 -9249489 + AT_rich Low_complexity Low_complexity 1 28 0 4 1432 4837 137 36 4 chr13 111035801 111036515 -9247797 + RMER19A LTR ERVK 1 737 0 4 1432 272 275 49 90 chr13 111036801 111036945 -9247367 + Charlie1b DNA MER1_type 381 518 -5 4 1432 1078 318 34 53 chr13 111037150 111037399 -9246913 + MER89 LTR ERV1 1 244 -315 4 1432 4151 133 23 38 chr13 111037399 111038009 -9246303 - MT2B LTR ERVL 0 601 1 5 1432 1078 318 34 53 chr13 111038009 111038267 -9246045 + MER89 LTR ERV1 245 498 -61 4 1432 1048 277 60 20 chr13 111038763 111039061 -9245251 - MTD LTR MaLR -100 319 10 5 1432 243 103 0 0 chr13 111039723 111039762 -9244550 + (CAGAGA)n Simple_repeat Simple_repeat 2 40 0 5 1432 294 351 54 6 chr13 111039965 111040131 -9244181 - MIR SINE MIR -17 245 72 5 1432 212 239 0 0 chr13 111040987 111041033 -9243279 + MIRc SINE MIR 88 133 -135 5 1432 1172 83 0 7 chr13 111042205 111042343 -9241969 + B1_Mus1 SINE Alu 3 140 -8 5 1432 258 32 0 0 chr13 111042343 111042374 -9241938 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 5 1432 217 328 73 59 chr13 111043026 111043162 -9241150 - MIR SINE MIR -119 143 6 5 1432 195 265 63 53 chr13 111044050 111044196 -9240116 + MIR SINE MIR 30 175 -87 5 1432 186 227 0 0 chr13 111044344 111044388 -9239924 + (TG)n Simple_repeat Simple_repeat 2 45 0 5 1432 619 327 121 54 chr13 111044634 111045112 -9239200 + MER74A LTR ERVL 47 556 -2 6 1432 700 296 114 47 chr13 111045483 111045781 -9238531 - ORR1D2 LTR MaLR -5 365 48 6 1432 212 200 10 62 chr13 111045847 111045943 -9238369 + (CAAA)n Simple_repeat Simple_repeat 2 92 0 6 1432 324 247 0 80 chr13 111048270 111048358 -9235954 - PB1D10 SINE Alu 0 117 37 6 1432 464 123 25 0 chr13 111050237 111050318 -9233994 + (TATATG)n Simple_repeat Simple_repeat 2 84 0 6 1432 21 57 0 0 chr13 111051392 111051427 -9232885 + AT_rich Low_complexity Low_complexity 1 35 0 6 1432 273 360 191 26 chr13 111051436 111051630 -9232682 - MIR SINE MIR -31 231 6 6 1432 524 300 34 24 chr13 111052173 111052378 -9231934 - MER3 DNA MER1_type -1 208 2 6 1432 257 214 0 0 chr13 111052799 111052855 -9231457 + MLT1A1 LTR MaLR 349 404 -4 6 1432 801 0 0 0 chr13 111054008 111054097 -9230215 + (TTTCC)n Simple_repeat Simple_repeat 1 89 0 6 1432 894 131 0 0 chr13 111054098 111054266 -9230046 + (TTC)n Simple_repeat Simple_repeat 1 168 0 7 1432 1296 45 0 17 chr13 111054266 111054444 -9229868 + (TCCCC)n Simple_repeat Simple_repeat 3 178 0 7 1432 330 228 90 112 chr13 111054472 111054561 -9229751 - PB1 SINE Alu -12 115 26 7 1432 243 288 106 41 chr13 111055154 111055277 -9229035 - L3 LINE CR1 -176 4313 4183 7 1432 1632 122 23 97 chr13 111055340 111055649 -9228663 + ORR1A4 LTR MaLR 1 286 -43 7 1432 6170 164 47 1 chr13 111055649 111057081 -9227231 + Lx LINE L1 5173 6648 -6 7 1432 436 55 0 0 chr13 111057091 111057146 -9227166 + ORR1A4 LTR MaLR 275 329 0 7 1432 541 345 153 12 chr13 111058941 111059281 -9225031 - L1MCa LINE L1 -6047 461 74 7 1432 1025 214 86 108 chr13 111059283 111059714 -9224598 + MT2A LTR ERVL 5 561 -40 7 1432 747 174 0 0 chr13 111059714 111059863 -9224449 + (TA)n Simple_repeat Simple_repeat 1 149 0 7 1432 354 45 0 0 chr13 111059856 111059900 -9224412 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1432 393 22 0 0 chr13 111059900 111059946 -9224366 + (TA)n Simple_repeat Simple_repeat 2 47 0 8 1432 294 242 20 40 chr13 111060369 111060468 -9223844 - Tigger5 DNA MER2_type -7 2399 2303 8 1432 449 311 63 40 chr13 111060462 111060636 -9223676 - Tigger5 DNA MER2_type -2163 243 66 8 1432 238 76 59 29 chr13 111060727 111060795 -9223517 + T-rich Low_complexity Low_complexity 1 70 0 8 1432 252 0 0 0 chr13 111061132 111061160 -9223152 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 8 1432 1095 59 0 0 chr13 111061161 111061296 -9223016 - B1_Mus1 SINE Alu -12 136 2 8 1432 441 0 0 0 chr13 111063213 111063262 -9221050 + (TG)n Simple_repeat Simple_repeat 2 50 0 8 1432 322 284 77 31 chr13 111063825 111064047 -9220265 + L1MEf LINE L1 1176 1407 -5008 8 1432 621 0 0 0 chr13 111064317 111064386 -9219926 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 8 1432 213 39 0 0 chr13 111064506 111064532 -9219780 + (TG)n Simple_repeat Simple_repeat 2 27 0 8 1432 493 332 84 20 chr13 111064665 111065348 -9218964 + L1MEf LINE L1 2113 2844 -3475 8 1432 1550 292 58 17 chr13 111065906 111066503 -9217809 + Lx8 LINE L1 6240 6848 -625 9 1432 180 0 0 0 chr13 111067492 111067512 -9216800 + (T)n Simple_repeat Simple_repeat 1 20 0 9 1432 354 107 0 0 chr13 111070889 111070945 -9213367 + (CA)n Simple_repeat Simple_repeat 1 56 0 9 1432 408 40 0 0 chr13 111072055 111072105 -9212207 + (CA)n Simple_repeat Simple_repeat 2 51 0 9 1432 564 290 11 134 chr13 111072290 111072477 -9211835 + RSINE1 SINE B4 1 164 -1 9 1432 233 57 29 0 chr13 111072480 111072515 -9211797 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 9 1432 1154 225 128 17 chr13 111072542 111072886 -9211426 - ORR1C2 LTR MaLR 0 384 3 9 1432 874 155 7 26 chr13 111073076 111073228 -9211084 + B1_Mur4 SINE Alu 2 150 0 9 1432 1124 41 0 14 chr13 111073757 111073904 -9210408 + (GAAA)n Simple_repeat Simple_repeat 1 145 0 9 1432 482 70 0 14 chr13 111073905 111073977 -9210335 + (GGGA)n Simple_repeat Simple_repeat 1 71 0 9 1432 761 79 0 9 chr13 111073977 111074092 -9210220 + (GAAA)n Simple_repeat Simple_repeat 4 117 0 1 1432 787 225 15 88 chr13 111074149 111074347 -9209965 + B3 SINE B2 2 185 -31 1 1432 396 125 0 0 chr13 111074347 111074411 -9209901 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1432 192 282 36 60 chr13 111074542 111074625 -9209687 - MIRm SINE MIR -146 130 50 1 1432 197 364 45 0 chr13 111075370 111075458 -9208854 - MIRb SINE MIR -42 226 135 1 1432 360 316 171 4 chr13 111075709 111075938 -9208374 + MTEb LTR MaLR 108 374 -5 1 1432 22 0 0 0 chr13 111076529 111076551 -9207761 + AT_rich Low_complexity Low_complexity 1 22 0 1 1432 259 318 50 79 chr13 111076562 111076702 -9207610 + MTE-int LTR MaLR 1411 1546 -34 1 1432 3845 134 36 22 chr13 111076740 111077563 -9206749 - L1_Mm LINE L1 -341 5545 4631 1 1432 279 0 0 0 chr13 111077563 111077594 -9206718 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1 1432 3845 127 13 22 chr13 111077594 111077622 -9206690 - L1_Mm LINE L1 -1253 4630 4603 1 1432 7211 86 20 0 chr13 111077621 111077929 -9206383 + L1_Mus3 LINE L1 5550 5858 -780 1 1432 384 40 0 0 chr13 111077929 111077979 -9206333 + (CA)n Simple_repeat Simple_repeat 1 50 0 1 1432 7211 81 22 0 chr13 111077979 111078730 -9205582 + L1_Mus3 LINE L1 5859 6630 -8 1 1432 229 314 239 14 chr13 111079794 111079936 -9204376 - LTR33 LTR ERVL -297 218 45 1 1432 272 357 8 97 chr13 111080432 111080556 -9203756 + L2a LINE L2 3314 3426 0 1 1432 235 282 56 14 chr13 111081440 111081512 -9202800 - MER81 DNA AcHobo -32 82 8 1 1432 21 0 0 0 chr13 111082225 111082246 -9202066 + AT_rich Low_complexity Low_complexity 1 21 0 1 1432 1919 230 22 22 chr13 111082569 111082986 -9201326 + MTD LTR MaLR 3 419 0 1 1432 508 256 97 40 chr13 111083059 111083234 -9201078 + B3A SINE B2 14 198 0 1 1432 1746 60 0 0 chr13 111083630 111083846 -9200466 - L1_Mus1 LINE L1 -1 6566 6351 1 1432 211 324 83 28 chr13 111084287 111084395 -9199917 - MIRm SINE MIR -113 163 50 1 1432 267 229 160 24 chr13 111085585 111085710 -9198602 + MIRc SINE MIR 83 224 -44 1 1432 21 0 0 0 chr13 111085846 111085867 -9198445 + AT_rich Low_complexity Low_complexity 1 21 0 1 1432 425 312 25 54 chr13 111086991 111087194 -9197118 - MLT2C1 LTR ERVL -104 293 97 1 1432 4732 226 23 75 chr13 111087241 111088523 -9195789 - Lx7 LINE L1 -337 7359 6145 1 1432 213 333 136 18 chr13 111088663 111088773 -9195539 + MIR SINE MIR 108 230 -32 1 1432 387 0 0 0 chr13 111089203 111089246 -9195066 + (TCTA)n Simple_repeat Simple_repeat 1 43 0 1 1432 252 16 60 75 chr13 111090013 111090080 -9194232 + T-rich Low_complexity Low_complexity 6 71 0 1 1432 1102 50 50 0 chr13 111090080 111090221 -9194091 - B1_Mus1 SINE Alu 0 148 1 1 1432 535 272 85 46 chr13 111090723 111091004 -9193308 - L1MC4 LINE L1 -384 7658 7367 1 1432 317 219 73 45 chr13 111091105 111091215 -9193097 + RCHARR1 DNA MER1_type 414 526 -448 1 1432 692 234 22 0 chr13 111091249 111091386 -9192926 + RSINE1 SINE B4 2 141 -24 1 1432 681 124 0 0 chr13 111091395 111091524 -9192788 + (TC)n Simple_repeat Simple_repeat 2 130 0 1 1432 299 25 0 24 chr13 111091524 111091565 -9192747 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1432 647 219 0 7 chr13 111091579 111091717 -9192595 + RCHARR1 DNA MER1_type 522 658 -316 1 1432 1070 80 0 0 chr13 111091718 111091855 -9192457 + B1_Mus1 SINE Alu 11 147 -1 1 1432 266 24 0 68 chr13 111091862 111091906 -9192406 + (A)n Simple_repeat Simple_repeat 1 41 0 1 1432 914 227 142 14 chr13 111091912 111092193 -9192119 + RCHARR1 DNA MER1_type 655 971 -3 1 1432 442 321 84 40 chr13 111092197 111092467 -9191845 - MT2A LTR ERVL -17 537 222 1 1432 891 87 0 0 chr13 111092467 111092593 -9191719 + (CA)n Simple_repeat Simple_repeat 1 126 0 1 1432 442 356 54 54 chr13 111092593 111092747 -9191565 - MT2A LTR ERVL -312 221 69 1 1432 249 203 58 0 chr13 111092780 111092849 -9191463 - L1MC4 LINE L1 -911 7131 7059 1 1432 322 245 20 41 chr13 111092888 111092986 -9191326 - BC1_Mm scRNA scRNA -49 103 8 1 1432 261 0 0 0 chr13 111093016 111093045 -9191267 + (TG)n Simple_repeat Simple_repeat 2 30 0 1 1432 210 71 0 0 chr13 111093045 111093072 -9191240 + (CATATA)n Simple_repeat Simple_repeat 5 32 0 1 1432 415 227 28 156 chr13 111093121 111093262 -9191050 - PB1 SINE Alu -4 123 1 1 1432 302 272 34 45 chr13 111093608 111093785 -9190527 - L1MC4 LINE L1 -2046 5949 5775 1 1432 22 0 0 0 chr13 111093974 111093996 -9190316 + AT_rich Low_complexity Low_complexity 1 22 0 1 1432 705 280 36 0 chr13 111093996 111094164 -9190148 + MER58A DNA MER1_type 50 223 -1 1 1432 1129 59 0 0 chr13 111094197 111094332 -9189980 - B1_Mm SINE Alu -11 136 2 1 1432 234 300 29 0 chr13 111094424 111094494 -9189818 + B1_Mus1 SINE Alu 12 83 -65 1 1432 550 114 119 24 chr13 111094523 111094649 -9189663 + L1_Mus3 LINE L1 6494 6631 -7 1 1432 548 257 7 28 chr13 111095982 111096126 -9188186 + ID_B1 SINE B4 76 216 -8 1 1432 1279 121 11 5 chr13 111097694 111097885 -9186427 + RLTR13D5 LTR ERVK 1 192 -831 1 1432 4491 118 13 1 chr13 111098156 111099019 -9185293 - Lx LINE L1 -697 5957 5086 1 1432 4131 124 43 25 chr13 111099019 111099691 -9184621 + Lx LINE L1 5965 6648 -6 1 1432 33846 48 2 4 chr13 111099711 111105390 -9178922 + L1Md_T LINE L1 3 5589 -297 1 1432 8458 33 0 0 chr13 111105390 111106386 -9177926 + L1Md_T LINE L1 5590 6585 0 1 1432 192 77 0 0 chr13 111106412 111106438 -9177874 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1432 4513 123 13 15 chr13 111106844 111107528 -9176784 + Lx2B LINE L1 6316 6998 -2 1 1432 974 136 6 25 chr13 111107670 111107829 -9176483 + URR1A DNA MER1_type 56 211 -15 1 1432 1023 102 27 0 chr13 111108102 111108249 -9176063 + B2_Mm2 SINE B2 2 152 -43 1 1432 437 50 17 0 chr13 111108249 111108309 -9176003 + (TA)n Simple_repeat Simple_repeat 2 62 0 1 1432 357 24 0 0 chr13 111110134 111110176 -9174136 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1432 1364 300 65 87 chr13 111110179 111110282 -9174030 - Lx9 LINE L1 -185 7459 7357 1 1432 222 37 0 0 chr13 111110282 111110309 -9174003 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1432 1364 300 65 87 chr13 111110309 111111023 -9173289 - Lx9 LINE L1 -288 7356 6662 1 1432 493 240 121 24 chr13 111111044 111111168 -9173144 - B3A SINE B2 -61 137 2 1 1432 1041 110 7 0 chr13 111112261 111112407 -9171905 + B1_Mus1 SINE Alu 2 148 0 1 1432 191 152 0 21 chr13 111112453 111112500 -9171812 + (TTG)n Simple_repeat Simple_repeat 2 47 0 1 1432 7245 61 21 3 chr13 111113435 111114356 -9169956 - L1_Mus2 LINE L1 0 6566 5630 1 1432 866 259 90 57 chr13 111114358 111114657 -9169655 + MTE2a LTR MaLR 71 379 0 1 1432 533 257 299 49 chr13 111114929 111115188 -9169124 - Lx7 LINE L1 0 7696 7367 1 1432 357 62 0 0 chr13 111115188 111115236 -9169076 + (CA)n Simple_repeat Simple_repeat 2 49 0 1 1432 533 257 299 49 chr13 111115236 111115320 -9168992 - Lx7 LINE L1 -330 7366 7269 1 1432 600 97 0 0 chr13 111115550 111115643 -9168669 + ORR1A2 LTR MaLR 235 327 0 1 1432 1119 191 0 0 chr13 111115644 111115833 -9168479 - Lx4A LINE L1 -120 6938 6750 1 1432 1543 216 7 16 chr13 111115981 111116291 -9168021 + Lx5 LINE L1 6736 7042 -8 1 1432 982 232 70 0 chr13 111116586 111116814 -9167498 + Lx7 LINE L1 5626 5869 -1827 1 1432 259 291 70 16 chr13 111117762 111117891 -9166421 + MLT1A1 LTR MaLR 259 394 -14 1 1432 189 0 0 0 chr13 111118002 111118023 -9166289 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 1 1432 1376 230 49 17 chr13 111118028 111118373 -9165939 - MTD LTR MaLR -60 359 4 1 1432 274 316 84 16 chr13 111118454 111118705 -9165607 - L1M5 LINE L1 -549 5630 5363 1 1432 22 0 0 0 chr13 111118996 111119018 -9165294 + AT_rich Low_complexity Low_complexity 1 22 0 1 1432 2183 120 26 79 chr13 111119121 111119469 -9164843 + ORR1B1 LTR MaLR 1 350 -44 1 1432 3295 19 0 0 chr13 111119469 111119840 -9164472 + L1Md_F2 LINE L1 6198 6568 -14 1 1432 2183 120 26 79 chr13 111119840 111119851 -9164461 + ORR1B1 LTR MaLR 351 351 -43 1 1432 211 28 56 0 chr13 111119851 111119887 -9164425 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1 1432 2183 120 26 79 chr13 111119887 111119942 -9164370 + ORR1B1 LTR MaLR 351 394 0 1 1432 408 40 0 0 chr13 111121042 111121092 -9163220 + (TA)n Simple_repeat Simple_repeat 2 51 0 1 1432 339 25 0 0 chr13 111121092 111121131 -9163181 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1432 441 129 0 0 chr13 111121175 111121245 -9163067 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1432 6036 73 4 13 chr13 111121423 111121480 -9162832 + L1Md_F2 LINE L1 5797 5853 -729 1 1432 3509 25 2 0 chr13 111121480 111121875 -9162437 - MTA_Mm LTR MaLR 0 396 1 1 1432 6036 73 4 13 chr13 111121875 111122610 -9161702 + L1Md_F2 LINE L1 5854 6582 0 1 1432 1438 72 14 5 chr13 111122856 111123066 -9161246 + L1_Mus3 LINE L1 6427 6638 0 1 1432 267 256 0 0 chr13 111123313 111123403 -9160909 + (CA)n Simple_repeat Simple_repeat 2 91 0 1 1432 3125 66 128 2 chr13 111123875 111124303 -9160009 + RLTR45 LTR ERVK 1 482 0 1 1432 378 327 93 91 chr13 111124814 111125096 -9159216 - B4A SINE B4 0 292 3 1 1432 273 57 0 0 chr13 111125178 111125213 -9159099 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1432 264 222 0 0 chr13 111125578 111125632 -9158680 + B1F SINE Alu 10 63 -86 1 1432 855 192 202 6 chr13 111125805 111125978 -9158334 - B3 SINE B2 -9 207 1 1 1432 30 0 0 0 chr13 111126537 111126567 -9157745 + AT_rich Low_complexity Low_complexity 1 30 0 1 1432 3663 122 30 89 chr13 111126567 111127267 -9157045 - Lx4A LINE L1 0 7058 6400 1 1432 642 287 81 9 chr13 111127708 111127919 -9156393 + B4A SINE B4 7 232 -60 1 1432 553 294 22 18 chr13 111127922 111128108 -9156204 - Lx7 LINE L1 -411 7285 7113 1 1432 21 36 0 0 chr13 111128120 111128148 -9156164 + AT_rich Low_complexity Low_complexity 1 28 0 1 1432 2746 47 4 159 chr13 111128168 111128627 -9155685 + RLTR10 LTR ERVK 1 388 -2 1 1432 15106 62 19 30 chr13 111128629 111130636 -9153676 + RLTR10-int LTR ERVK 1 1986 -1 1 1432 2786 44 11 129 chr13 111130636 111131076 -9153236 + RLTR10 LTR ERVK 1 388 -2 1 1432 29 28 0 0 chr13 111131168 111131204 -9153108 + AT_rich Low_complexity Low_complexity 1 36 0 1 1432 288 372 149 20 chr13 111131802 111132057 -9152255 - MTE2b LTR MaLR -91 288 1 1 1432 967 87 13 7 chr13 111132326 111132476 -9151836 + L1_Mus3 LINE L1 6479 6629 -9 1 1432 201 358 70 52 chr13 111132844 111132959 -9151353 - MIRc SINE MIR -147 121 5 1 1432 472 232 124 64 chr13 111134069 111134318 -9149994 + RMER13A LTR ERVK 230 493 -367 1 1432 318 296 27 53 chr13 111135698 111135848 -9148464 + RMER15 LTR ERVL 276 421 -154 2 1432 951 196 3 14 chr13 111135949 111136162 -9148150 + B3 SINE B2 1 208 -8 2 1432 229 327 18 26 chr13 111136458 111136571 -9147741 + MIRc SINE MIR 45 156 -112 2 1432 387 0 0 0 chr13 111136701 111136744 -9147568 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1432 1144 76 0 0 chr13 111137469 111137614 -9146698 - B1_Mus1 SINE Alu -3 145 1 2 1432 206 154 26 0 chr13 111137836 111137875 -9146437 + T-rich Low_complexity Low_complexity 1 40 0 2 1432 434 197 29 0 chr13 111137985 111138122 -9146190 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 2 1432 1252 331 47 16 chr13 111138231 111138924 -9145388 - Lx8 LINE L1 -240 7233 6568 2 1432 340 82 33 0 chr13 111139151 111139212 -9145100 + (TC)n Simple_repeat Simple_repeat 1 63 0 2 1432 678 122 0 109 chr13 111139243 111139445 -9144867 + CT-rich Low_complexity Low_complexity 1 180 0 2 1432 360 64 0 0 chr13 111139496 111139543 -9144769 + (TC)n Simple_repeat Simple_repeat 1 47 0 2 1432 24 53 0 0 chr13 111140172 111140210 -9144102 + AT_rich Low_complexity Low_complexity 1 38 0 2 1432 335 279 45 70 chr13 111140276 111140418 -9143894 - MLT1A LTR MaLR -20 370 246 2 1432 243 292 0 0 chr13 111140529 111140601 -9143711 - ID4_ SINE ID -10 73 2 2 1432 408 308 13 20 chr13 111140604 111140753 -9143559 - MLT1A LTR MaLR -210 164 17 2 1432 1004 172 18 69 chr13 111140773 111140822 -9143490 + URR1B DNA MER1_type 5 54 -171 2 1432 289 0 49 0 chr13 111140822 111140863 -9143449 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 2 1432 1087 97 0 0 chr13 111140863 111141008 -9143304 - B1_Mm SINE Alu -2 145 1 2 1432 1004 172 18 69 chr13 111141008 111141175 -9143137 + URR1B DNA MER1_type 55 210 -15 2 1432 256 136 45 0 chr13 111141789 111141833 -9142479 + Lx9 LINE L1 7308 7353 -291 2 1432 533 240 0 11 chr13 111141904 111142085 -9142227 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 1432 479 153 0 10 chr13 111142619 111142718 -9141594 + CT-rich Low_complexity Low_complexity 1 98 0 2 1432 21 57 0 0 chr13 111142836 111142871 -9141441 + AT_rich Low_complexity Low_complexity 1 35 0 2 1432 207 0 0 0 chr13 111143054 111143077 -9141235 + (CAAAAA)n Simple_repeat Simple_repeat 1 23 0 2 1432 196 28 83 0 chr13 111143339 111143375 -9140937 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2 1432 252 310 0 0 chr13 111143480 111143551 -9140761 + ID4 SINE ID 3 73 -10 2 1432 21 0 0 0 chr13 111144724 111144745 -9139567 + AT_rich Low_complexity Low_complexity 1 21 0 2 1432 216 295 41 0 chr13 111145698 111145786 -9138526 - MIRb SINE MIR -48 220 122 2 1432 432 0 0 0 chr13 111147138 111147186 -9137126 + (CA)n Simple_repeat Simple_repeat 2 49 0 2 1432 375 23 0 0 chr13 111147186 111147230 -9137082 + (CCA)n Simple_repeat Simple_repeat 1 44 0 2 1432 480 18 0 0 chr13 111148832 111148889 -9135423 + (TC)n Simple_repeat Simple_repeat 1 57 0 2 1432 420 118 0 0 chr13 111148889 111148956 -9135356 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 1433 477 0 0 0 chr13 111149372 111149425 -9134887 + (TTCC)n Simple_repeat Simple_repeat 1 53 0 2 1433 744 133 0 0 chr13 111149427 111149547 -9134765 + (TC)n Simple_repeat Simple_repeat 1 120 0 2 1433 212 31 62 0 chr13 111150453 111150485 -9133827 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 2 1433 318 318 91 50 chr13 111151505 111151803 -9132509 + L1ME2 LINE L1 5701 6010 -152 2 1433 259 181 34 8 chr13 111151907 111152024 -9132288 + (TA)n Simple_repeat Simple_repeat 2 121 0 2 1433 29 47 0 0 chr13 111152129 111152172 -9132140 + AT_rich Low_complexity Low_complexity 1 43 0 2 1433 437 240 10 0 chr13 111154672 111154776 -9129536 - Lx9 LINE L1 -192 7452 7348 2 1433 227 254 0 0 chr13 111155589 111155652 -9128660 + (TCTCTG)n Simple_repeat Simple_repeat 3 65 0 2 1433 183 80 0 0 chr13 111155661 111155686 -9128626 + (TATG)n Simple_repeat Simple_repeat 4 28 0 2 1433 2022 130 8 22 chr13 111156223 111156585 -9127727 + ORR1B2 LTR MaLR 3 359 -8 2 1433 254 87 22 0 chr13 111157217 111157263 -9127049 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 1433 267 133 0 0 chr13 111157895 111157940 -9126372 + (GGGA)n Simple_repeat Simple_repeat 1 45 0 2 1433 243 0 0 0 chr13 111157989 111158016 -9126296 + (TG)n Simple_repeat Simple_repeat 1 27 0 2 1433 422 150 0 72 chr13 111158017 111158211 -9126101 + GA-rich Low_complexity Low_complexity 1 180 0 2 1433 1186 285 89 18 chr13 111158346 111158853 -9125459 + MER67A LTR ERV1 1 543 0 2 1433 269 246 240 24 chr13 111159557 111159578 -9124734 + ID_B1 SINE B4 73 224 0 2 1433 456 221 19 0 chr13 111159578 111159682 -9124630 + PB1D9 SINE Alu 15 120 0 2 1433 24 0 0 0 chr13 111160758 111160782 -9123530 + AT_rich Low_complexity Low_complexity 1 24 0 2 1433 410 218 8 56 chr13 111160853 111160979 -9123333 + Lx8 LINE L1 2635 2754 -3093 2 1433 1554 259 90 41 chr13 111161000 111161730 -9122582 + L1_Mur3 LINE L1 3577 4342 -1538 2 1433 1840 181 34 48 chr13 111161730 111161856 -9122456 + MTB_Mm LTR MaLR 1 120 -287 2 1433 2122 120 35 6 chr13 111161856 111162174 -9122138 - ORR1A2 LTR MaLR 0 327 1 2 1433 10375 137 97 6 chr13 111162174 111163972 -9120340 - ORR1A2-int LTR MaLR 0 1963 1 2 1433 2023 129 51 6 chr13 111163972 111164285 -9120027 - ORR1A2 LTR MaLR 0 327 1 2 1433 1840 181 34 48 chr13 111164285 111164569 -9119743 + MTB_Mm LTR MaLR 121 405 -2 2 1433 1984 163 83 38 chr13 111164571 111165064 -9119248 + ORR1A4-int LTR MaLR 1029 1963 0 2 1433 1137 172 24 48 chr13 111165064 111165314 -9118998 + ORR1A4 LTR MaLR 1 244 -85 2 1433 514 289 5 48 chr13 111165338 111165545 -9118767 + Lx8 LINE L1 4922 5119 -728 2 1433 750 176 390 30 chr13 111165552 111165816 -9118496 + Lx8 LINE L1 5273 5631 -216 2 1433 974 252 85 40 chr13 111165836 111166346 -9117966 - RMER4B LTR ERVK -16 569 1 2 1433 1050 328 54 74 chr13 111166347 111166381 -9117931 + Lx8 LINE L1 5662 5695 -1778 2 1433 2106 41 0 36 chr13 111166381 111166658 -9117654 + L1Md_F2 LINE L1 6316 6582 0 2 1433 1050 328 54 74 chr13 111166658 111166723 -9117589 + Lx8 LINE L1 5696 5749 -1724 2 1433 348 24 0 0 chr13 111166723 111166764 -9117548 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1433 279 0 0 0 chr13 111166764 111166794 -9117518 + (GA)n Simple_repeat Simple_repeat 2 32 0 2 1433 1050 328 54 74 chr13 111166794 111167219 -9117093 + Lx8 LINE L1 5750 6164 -1309 2 1433 517 80 11 11 chr13 111167219 111167308 -9117004 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 2 1433 1456 297 48 19 chr13 111167308 111168208 -9116104 + Lx9 LINE L1 6310 7345 -299 2 1433 438 178 0 0 chr13 111168216 111168306 -9116006 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 2 1433 401 250 208 19 chr13 111168354 111168570 -9115742 + Lx9 LINE L1 7360 7616 -28 2 1433 1342 294 48 28 chr13 111168631 111169093 -9115219 + Lx8 LINE L1 7001 7471 -2 2 1433 1347 97 10 0 chr13 111169129 111169324 -9114988 + Lx2 LINE L1 6795 6991 -6 2 1433 2472 103 79 10 chr13 111169733 111170124 -9114188 - MTC LTR MaLR 0 421 4 2 1433 405 0 0 0 chr13 111170262 111170307 -9114005 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1433 1486 216 87 9 chr13 111170650 111170995 -9113317 + ORR1D1 LTR MaLR 3 374 0 2 1433 1986 291 122 22 chr13 111171021 111171732 -9112580 - Lx7 LINE L1 -373 7323 6542 2 1433 342 0 0 0 chr13 111171732 111171770 -9112542 + (TA)n Simple_repeat Simple_repeat 1 38 0 2 1433 843 184 0 0 chr13 111171772 111171992 -9112320 + (CA)n Simple_repeat Simple_repeat 1 220 0 2 1433 2163 282 75 36 chr13 111171994 111172835 -9111477 + Lx7 LINE L1 5612 6485 -1211 2 1433 198 0 0 0 chr13 111173135 111173157 -9111155 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 2 1433 1158 68 0 13 chr13 111173460 111173609 -9110703 - B1_Mus1 SINE Alu 0 148 2 2 1433 311 292 71 0 chr13 111173709 111173822 -9110490 + MLT1A1 LTR MaLR 283 403 -5 2 1433 259 113 0 31 chr13 111173993 111174057 -9110255 + (TTTTTG)n Simple_repeat Simple_repeat 2 63 0 2 1433 320 130 56 0 chr13 111174065 111174119 -9110193 + B1_Mus1 SINE Alu 1 57 -91 2 1433 1918 164 63 3 chr13 111174276 111174625 -9109687 - RMER1B Other Other -156 910 541 2 1433 3903 260 59 104 chr13 111174836 111175060 -9109252 - Lx5 LINE L1 -8 7050 6865 2 1433 417 39 0 0 chr13 111175060 111175111 -9109201 + (TG)n Simple_repeat Simple_repeat 1 51 0 2 1433 3903 260 59 104 chr13 111175111 111175134 -9109178 - Lx5 LINE L1 -194 6864 6859 2 1433 1203 107 0 0 chr13 111175134 111175312 -9109000 + (GGGAGA)n Simple_repeat Simple_repeat 3 180 0 2 1433 21069 179 63 36 chr13 111175312 111180021 -9104291 - Lx5 LINE L1 -200 6858 2052 2 1433 423 0 0 0 chr13 111180021 111180068 -9104244 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1433 21069 183 56 65 chr13 111180068 111181238 -9103074 - Lx5 LINE L1 -3826 2051 892 2 1433 729 56 0 0 chr13 111181418 111181525 -9102787 - RLTR10C LTR ERVK -182 254 148 2 1433 845 165 20 0 chr13 111181823 111181998 -9102314 - B2_Mm2 SINE B2 -6 187 1 2 1433 324 0 0 0 chr13 111182968 111183004 -9101308 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1433 192 306 0 0 chr13 111183470 111183519 -9100793 + MIRm SINE MIR 105 153 -123 2 1433 963 48 0 0 chr13 111184058 111184184 -9100128 + B1_Mus1 SINE Alu 2 127 -21 2 1433 507 169 6 128 chr13 111184059 111184215 -9100097 + ID_B1 SINE B4 84 220 -4 2 1433 212 0 36 0 chr13 111186950 111186978 -9097334 + (TGGGGG)n Simple_repeat Simple_repeat 2 30 0 2 1433 207 162 0 0 chr13 111187409 111187446 -9096866 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1433 252 0 0 0 chr13 111187789 111187817 -9096495 + (A)n Simple_repeat Simple_repeat 1 28 0 2 1433 252 0 0 0 chr13 111190148 111190176 -9094136 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1433 210 37 0 0 chr13 111190436 111190463 -9093849 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2 1433 398 269 72 36 chr13 111192716 111192735 -9091577 - ID_B1 SINE B4 0 224 82 2 1433 526 254 0 8 chr13 111192735 111192854 -9091458 - B1F SINE Alu -31 118 1 2 1433 379 298 43 12 chr13 111193952 111194115 -9090197 - LTR33A LTR ERVL -12 508 341 2 1433 1528 215 157 71 chr13 111194486 111194892 -9089420 + Lx7 LINE L1 7082 7523 -173 2 1433 3662 77 4 6 chr13 111194892 111195387 -9088925 - L1_Mus3 LINE L1 -1 6637 6144 2 1433 1528 215 157 71 chr13 111195387 111195546 -9088766 + Lx7 LINE L1 7524 7696 0 2 1433 694 268 105 14 chr13 111196732 111197008 -9087304 - MER63D DNA AcHobo -731 330 30 2 1433 348 24 0 0 chr13 111197243 111197284 -9087028 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1433 221 83 0 27 chr13 111197507 111197544 -9086768 + (TA)n Simple_repeat Simple_repeat 2 37 0 2 1433 233 214 120 33 chr13 111198571 111198663 -9085649 + MER103 DNA DNA 22 121 -45 2 1433 228 329 0 13 chr13 111198852 111198929 -9085383 + CT-rich Low_complexity Low_complexity 5 80 0 2 1433 22 35 0 0 chr13 111199304 111199333 -9084979 + AT_rich Low_complexity Low_complexity 1 29 0 2 1433 543 274 21 88 chr13 111201294 111201486 -9082826 + B3A SINE B2 25 203 -13 3 1433 326 178 0 27 chr13 111201486 111201596 -9082716 + (CA)n Simple_repeat Simple_repeat 1 107 0 3 1433 3940 42 2 10 chr13 111202089 111202575 -9081737 + L1Md_F2 LINE L1 6100 6581 -1 3 1433 306 0 0 0 chr13 111202715 111202749 -9081563 + (CA)n Simple_repeat Simple_repeat 2 35 0 3 1433 274 0 0 68 chr13 111204137 111204181 -9080131 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 3 1433 429 255 54 47 chr13 111204235 111204383 -9079929 - B1F SINE Alu 0 149 1 3 1433 227 131 66 0 chr13 111205284 111205345 -9078967 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 1433 405 0 0 0 chr13 111207057 111207102 -9077210 + (TC)n Simple_repeat Simple_repeat 2 46 0 3 1433 198 0 0 0 chr13 111207102 111207123 -9077189 + (TG)n Simple_repeat Simple_repeat 1 22 0 3 1433 492 294 32 13 chr13 111207494 111207649 -9076663 + B4A SINE B4 118 275 -17 3 1433 387 0 0 0 chr13 111207714 111207757 -9076555 + (CA)n Simple_repeat Simple_repeat 2 44 0 3 1433 28 0 0 0 chr13 111208427 111208455 -9075857 + AT_rich Low_complexity Low_complexity 1 28 0 3 1433 306 312 101 8 chr13 111212830 111212959 -9071353 + MER2 DNA MER2_type 1 141 -204 3 1433 811 301 61 87 chr13 111212967 111213079 -9071233 + L1_Rod LINE L1 5258 5375 -922 3 1433 225 0 0 0 chr13 111213079 111213104 -9071208 + (TA)n Simple_repeat Simple_repeat 1 25 0 3 1433 952 279 39 72 chr13 111213104 111213483 -9070829 + L1_Rod LINE L1 5327 5736 -561 3 1433 481 288 75 11 chr13 111213944 111214196 -9070116 - RLTR12B LTR ERVK -23 504 250 3 1433 8342 40 0 0 chr13 111214228 111215259 -9069053 - L1Md_T LINE L1 0 6582 5552 3 1433 623 251 64 55 chr13 111215271 111215507 -9068805 - RLTR12B LTR ERVK -259 269 47 3 1433 303 85 0 0 chr13 111215802 111215849 -9068463 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1433 280 299 31 43 chr13 111216928 111217089 -9067223 + RMER15 LTR ERVL 3 161 -414 3 1433 319 252 28 28 chr13 111217110 111217216 -9067096 + RMER15 LTR ERVL 304 409 -166 3 1433 296 191 16 0 chr13 111217241 111217304 -9067008 - URR1B DNA MER1_type -45 180 117 3 1433 1020 304 108 5 chr13 111217403 111217820 -9066492 + Lx8 LINE L1 6717 7176 -297 3 1433 3167 217 112 7 chr13 111217817 111218559 -9065753 + Lx2B LINE L1 6180 6999 -1 3 1433 3223 63 17 5 chr13 111218830 111219246 -9065066 - BGLII LTR ERVK 0 421 1 3 1433 361 257 28 19 chr13 111219263 111219370 -9064942 - PB1D10 SINE Alu 0 117 10 3 1433 266 259 42 67 chr13 111219977 111220097 -9064215 - MER58A DNA MER1_type -23 201 85 3 1433 240 109 35 52 chr13 111221938 111221996 -9062316 + A-rich Low_complexity Low_complexity 5 61 0 3 1433 2738 205 59 12 chr13 111222101 111222663 -9061649 - Lx5 LINE L1 0 7050 6463 3 1433 5325 199 50 50 chr13 111224414 111225646 -9058666 - Lx9 LINE L1 0 7644 6413 3 1433 474 303 15 8 chr13 111226006 111226139 -9058173 - B1F1 SINE Alu -10 139 6 3 1433 1576 113 0 39 chr13 111228278 111228509 -9055803 - URR1B DNA MER1_type -2 223 2 3 1433 225 65 0 0 chr13 111228732 111228763 -9055549 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 3 1433 785 173 6 22 chr13 111229157 111229340 -9054972 + CT-rich Low_complexity Low_complexity 1 180 0 3 1433 311 242 65 0 chr13 111229340 111229402 -9054910 - B1_Mur1 SINE Alu -8 141 76 3 1433 21 0 0 0 chr13 111229413 111229434 -9054878 + AT_rich Low_complexity Low_complexity 1 21 0 3 1433 2184 112 10 3 chr13 111229434 111229740 -9054572 + L1_Mus4 LINE L1 6325 6632 -4 3 1433 390 21 0 0 chr13 111229774 111229821 -9054491 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1433 258 346 28 0 chr13 111231340 111231447 -9052865 + B1_Mm SINE Alu 1 110 -37 3 1433 303 28 0 0 chr13 111232650 111232686 -9051626 + (A)n Simple_repeat Simple_repeat 1 36 0 3 1433 216 0 0 0 chr13 111235911 111235935 -9048377 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 3 1433 22 0 0 0 chr13 111237402 111237424 -9046888 + AT_rich Low_complexity Low_complexity 1 22 0 3 1433 183 129 0 0 chr13 111238315 111238346 -9045966 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 1433 1189 88 0 0 chr13 111238346 111238493 -9045819 - B1_Mus2 SINE Alu 0 147 1 3 1433 2366 139 99 14 chr13 111238659 111238672 -9045640 - Lx4A LINE L1 -2 7056 7043 3 1433 246 62 0 0 chr13 111238672 111238704 -9045608 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 3 1433 2366 139 99 14 chr13 111238704 111239112 -9045200 - Lx4A LINE L1 -16 7042 6599 3 1433 4484 153 30 88 chr13 111239114 111240032 -9044280 - L1_Mur2 LINE L1 -5844 868 4 3 1433 229 347 20 46 chr13 111241043 111241194 -9043118 + B1F1 SINE Alu 3 149 0 3 1433 458 250 0 0 chr13 111241200 111241280 -9043032 + ID4 SINE ID 4 83 0 3 1433 622 284 29 38 chr13 111241563 111241772 -9042540 - B3 SINE B2 -9 207 1 3 1433 27 0 0 0 chr13 111242838 111242865 -9041447 + AT_rich Low_complexity Low_complexity 1 27 0 3 1433 855 226 51 8 chr13 111243868 111243949 -9040363 + Lx9 LINE L1 7398 7479 -165 3 1433 519 17 0 0 chr13 111243949 111244009 -9040303 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 3 1433 855 226 51 8 chr13 111244009 111244164 -9040148 + Lx9 LINE L1 7480 7644 0 3 1433 466 329 27 3 chr13 111244427 111244619 -9039693 + B3 SINE B2 2 198 0 3 1433 441 0 0 0 chr13 111246673 111246722 -9037590 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 3 1433 421 278 217 90 chr13 111246740 111246777 -9037535 - B3A SINE B2 -11 187 163 3 1433 468 35 0 0 chr13 111246777 111246835 -9037477 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1433 421 278 217 90 chr13 111246835 111246963 -9037349 - B3A SINE B2 -36 162 1 3 1433 1578 307 48 70 chr13 111247190 111248207 -9036105 - Lx9 LINE L1 -1 7643 6649 3 1433 21 0 0 0 chr13 111249906 111249927 -9034385 + AT_rich Low_complexity Low_complexity 1 21 0 3 1433 367 360 0 0 chr13 111250593 111250693 -9033619 + PB1D10 SINE Alu 2 101 -16 3 1433 285 75 0 0 chr13 111250711 111250751 -9033561 + (CAGA)n Simple_repeat Simple_repeat 1 40 0 3 1433 203 125 0 24 chr13 111250756 111250774 -9033538 + (CA)n Simple_repeat Simple_repeat 2 19 0 3 1433 210 71 0 0 chr13 111250774 111250802 -9033510 + (CG)n Simple_repeat Simple_repeat 2 29 0 3 1433 203 125 0 24 chr13 111250802 111250824 -9033488 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1433 372 22 0 0 chr13 111250824 111250869 -9033443 + (GA)n Simple_repeat Simple_repeat 2 46 0 3 1433 657 110 0 0 chr13 111252660 111252760 -9031552 + (TCTG)n Simple_repeat Simple_repeat 4 103 0 3 1433 379 290 93 36 chr13 111252878 111253103 -9031209 - Kanga11a DNA Tc2 -571 399 162 3 1433 185 0 0 39 chr13 111254437 111254463 -9029849 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3 1433 1080 215 9 9 chr13 111255082 111255303 -9029009 + URR1B DNA MER1_type 5 225 0 3 1433 287 83 40 27 chr13 111257111 111257185 -9027127 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 3 1433 533 141 10 0 chr13 111257184 111257283 -9027029 + GA-rich Low_complexity Low_complexity 3 102 0 3 1433 287 289 92 40 chr13 111257387 111257560 -9026752 - MIR SINE MIR 0 262 81 3 1433 234 0 0 0 chr13 111258092 111258118 -9026194 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1433 252 0 0 0 chr13 111258321 111258349 -9025963 + (TC)n Simple_repeat Simple_repeat 1 28 0 3 1433 378 0 0 0 chr13 111258349 111258390 -9025922 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1433 1015 114 31 25 chr13 111259694 111260051 -9024261 + (TCCA)n Simple_repeat Simple_repeat 1 358 0 3 1433 441 156 0 0 chr13 111260599 111260676 -9023636 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1433 31 44 0 0 chr13 111260807 111260852 -9023460 + AT_rich Low_complexity Low_complexity 1 45 0 3 1433 432 253 0 0 chr13 111262061 111262366 -9021946 + (CA)n Simple_repeat Simple_repeat 1 305 0 3 1433 378 0 0 0 chr13 111262473 111262515 -9021797 + (CA)n Simple_repeat Simple_repeat 2 43 0 3 1433 865 236 27 73 chr13 111262635 111262854 -9021458 - B3 SINE B2 -6 210 2 3 1433 273 119 0 0 chr13 111263731 111263773 -9020539 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 3 1433 737 218 5 34 chr13 111263905 111264096 -9020216 + B3 SINE B2 2 178 -17 3 1433 2593 101 0 0 chr13 111264830 111265157 -9019155 - ORR1A2 LTR MaLR 0 327 1 3 1433 583 344 75 27 chr13 111265460 111265831 -9018481 + MLT2C1 LTR ERVL 7 395 -2 3 1433 219 150 0 0 chr13 111267036 111267076 -9017236 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 3 1433 676 290 78 42 chr13 111267081 111267419 -9016893 + MLT1B LTR MaLR 37 464 -3 3 1433 246 282 14 14 chr13 111267912 111267984 -9016328 + MIR SINE MIR 58 129 -133 3 1433 678 25 0 0 chr13 111268423 111268503 -9015809 + (TC)n Simple_repeat Simple_repeat 1 80 0 3 1433 279 0 0 0 chr13 111268503 111268533 -9015779 + (CA)n Simple_repeat Simple_repeat 1 31 0 3 1433 265 275 0 0 chr13 111268537 111268606 -9015706 - Lx9 LINE L1 -192 7452 7384 3 1433 306 288 214 32 chr13 111268996 111269402 -9014910 + L2 LINE L2 1305 1784 -1635 3 1433 285 252 114 108 chr13 111269561 111269868 -9014444 - L1MC5 LINE L1 -1016 6945 6637 3 1433 185 94 31 0 chr13 111270125 111270157 -9014155 + (TTG)n Simple_repeat Simple_repeat 2 34 0 3 1433 228 100 0 0 chr13 111270151 111270191 -9014121 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 3 1433 672 315 7 75 chr13 111270566 111270858 -9013454 + B4A SINE B4 3 274 -18 3 1433 447 52 0 0 chr13 111270874 111270932 -9013380 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1433 441 0 0 0 chr13 111270932 111270980 -9013332 + (GA)n Simple_repeat Simple_repeat 2 50 0 3 1433 358 20 0 38 chr13 111270988 111271041 -9013271 + (CA)n Simple_repeat Simple_repeat 2 52 0 3 1433 293 127 36 0 chr13 111271323 111271378 -9012934 + CT-rich Low_complexity Low_complexity 6 62 0 3 1433 1972 270 80 44 chr13 111273020 111273682 -9010630 - Lx8 LINE L1 -187 7286 6601 3 1433 234 196 0 0 chr13 111273706 111273752 -9010560 + Lx8 LINE L1 7426 7471 -2 3 1433 475 238 0 0 chr13 111274327 111274411 -9009901 + B1_Mus1 SINE Alu 21 104 -44 4 1433 252 0 0 0 chr13 111274647 111274675 -9009637 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1433 597 14 0 0 chr13 111274817 111274887 -9009425 + (TCC)n Simple_repeat Simple_repeat 1 70 0 4 1433 21 0 0 0 chr13 111275098 111275119 -9009193 + AT_rich Low_complexity Low_complexity 1 21 0 4 1433 379 259 26 18 chr13 111275370 111275484 -9008828 - L1MEc LINE L1 -5524 876 762 4 1433 426 336 20 45 chr13 111275801 111276047 -9008265 - L1MEc LINE L1 -6060 340 101 4 1433 236 300 150 0 chr13 111277204 111277284 -9007028 - RSINE1 SINE B4 -72 93 2 4 1433 460 257 89 85 chr13 111277575 111277606 -9006706 + CYRA11_Mm Unknown Y-chromosome 127 374 -243 4 1433 1179 180 5 23 chr13 111277606 111277822 -9006490 - URR1B DNA MER1_type -1 224 13 4 1433 238 274 68 45 chr13 111277946 111278034 -9006278 + MTE2b LTR MaLR 279 368 -11 4 1433 560 194 0 8 chr13 111279484 111279614 -9004698 + GA-rich Low_complexity Low_complexity 1 129 0 4 1433 198 143 0 0 chr13 111279887 111279922 -9004390 + (AGGGGG)n Simple_repeat Simple_repeat 3 37 0 4 1434 759 321 21 4 chr13 111280981 111281262 -9003050 + B4A SINE B4 1 286 -6 4 1434 1988 138 106 6 chr13 111281413 111281771 -9002541 - ORR1B1 LTR MaLR 0 394 1 4 1434 260 91 0 22 chr13 111281936 111281981 -9002331 + (TATG)n Simple_repeat Simple_repeat 1 44 0 4 1434 27 0 0 0 chr13 111282249 111282276 -9002036 + AT_rich Low_complexity Low_complexity 1 27 0 4 1434 392 216 39 23 chr13 111282556 111282684 -9001628 - RMER17B LTR ERVK -499 459 330 4 1434 263 326 43 0 chr13 111282911 111283003 -9001309 + Kanga1c DNA Tc2 311 406 -323 4 1434 201 39 0 0 chr13 111283037 111283063 -9001249 + (CAG)n Simple_repeat Simple_repeat 1 26 0 4 1434 284 342 59 62 chr13 111283164 111283488 -9000824 + Kanga1c DNA Tc2 405 727 -2 4 1434 220 143 56 14 chr13 111283681 111283752 -9000560 + (TA)n Simple_repeat Simple_repeat 1 74 0 4 1434 264 261 114 30 chr13 111283760 111283926 -9000386 - L1MA8 LINE L1 -42 6249 6070 4 1434 348 24 0 0 chr13 111284906 111284947 -8999365 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1434 228 312 62 0 chr13 111285719 111285799 -8998513 - ORR1E LTR MaLR -274 85 1 4 1434 311 396 0 32 chr13 111285847 111286001 -8998311 + Charlie8 DNA MER1_type 127 275 -2153 4 1434 403 338 43 72 chr13 111285995 111286300 -8998012 - MLT1A1 LTR MaLR -12 396 58 4 1434 1177 74 0 0 chr13 111287284 111287432 -8996880 - B1_Mus1 SINE Alu 0 148 1 4 1434 368 276 114 13 chr13 111287477 111287635 -8996677 - MER112 DNA MER1_type -87 174 1 4 1434 230 227 23 148 chr13 111288372 111288460 -8995852 + Charlie7 DNA MER1_type 1291 1367 -1245 4 1434 702 133 0 0 chr13 111289082 111289195 -8995117 + (TATATG)n Simple_repeat Simple_repeat 5 117 0 4 1434 527 69 0 0 chr13 111289273 111289345 -8994967 + B1_Mus2 SINE Alu 76 147 0 4 1434 1973 116 31 25 chr13 111289595 111289922 -8994390 + ORR1A4 LTR MaLR 1 329 0 4 1434 286 297 50 14 chr13 111290856 111290996 -8993316 - MIR SINE MIR -22 240 96 4 1434 1015 194 32 18 chr13 111291571 111291792 -8992520 + URR1B DNA MER1_type 1 224 -1 4 1434 354 262 37 37 chr13 111291959 111292066 -8992246 + PB1D10 SINE Alu 3 109 -8 4 1434 229 240 0 10 chr13 111292581 111292638 -8991674 - PB1D10 SINE Alu 0 127 63 4 1434 1880 39 13 0 chr13 111293420 111293654 -8990658 + L1Md_F3 LINE L1 6345 6581 -3 4 1434 345 283 174 4 chr13 111293914 111294085 -8990227 + MTEa LTR MaLR 22 214 -165 4 1434 217 321 25 0 chr13 111294174 111294255 -8990057 + (CCTG)n Simple_repeat Simple_repeat 3 85 0 4 1434 668 35 11 0 chr13 111294257 111294344 -8989968 + (TTCC)n Simple_repeat Simple_repeat 3 90 0 4 1434 283 154 0 19 chr13 111294345 111294398 -8989914 + MTEa LTR MaLR 328 379 0 4 1434 583 232 244 9 chr13 111294576 111294843 -8989469 + L1MC LINE L1 4857 5200 -946 4 1434 495 0 0 0 chr13 111294843 111294898 -8989414 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 1434 583 232 244 9 chr13 111294898 111294974 -8989338 + L1MC LINE L1 5201 5280 -866 4 1434 612 176 84 49 chr13 111294988 111295191 -8989121 - Lx9 LINE L1 -7 7637 7428 4 1434 334 199 413 6 chr13 111295192 111295359 -8988953 + L1MC LINE L1 5272 5506 -827 4 1434 229 319 28 42 chr13 111295410 111295482 -8988830 + PB1D10 SINE Alu 1 71 -46 4 1434 405 239 70 56 chr13 111295826 111295968 -8988344 + RLTR23 LTR ERV1 287 430 0 4 1434 510 291 35 71 chr13 111296016 111296186 -8988126 + RSINE1 SINE B4 2 165 0 4 1434 306 206 0 0 chr13 111296188 111296256 -8988056 + (CATA)n Simple_repeat Simple_repeat 1 68 0 4 1434 348 125 0 0 chr13 111296263 111296311 -8988001 + HAL1-3A_ME LINE L1 1976 2023 -835 4 1434 3307 169 5 14 chr13 111296317 111296806 -8987506 - Lx8 LINE L1 -1690 5783 5294 4 1434 1530 31 5 10 chr13 111296806 111297002 -8987310 - L1Md_F3 LINE L1 -2 6582 6388 4 1434 3307 157 5 15 chr13 111297002 111297128 -8987184 - Lx8 LINE L1 -590 5293 5176 4 1434 1578 122 0 4 chr13 111297130 111297385 -8986927 + Lx2 LINE L1 5717 5970 -1027 4 1434 506 125 0 0 chr13 111297379 111297451 -8986861 - Lx2 LINE L1 -469 6528 6457 4 1434 2415 139 17 2 chr13 111297396 111297882 -8986430 + Lx2 LINE L1 6174 6912 -96 4 1434 182 160 20 0 chr13 111297920 111297970 -8986342 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 1434 291 342 120 16 chr13 111298069 111298327 -8985985 - L1MCa LINE L1 -6131 377 93 4 1434 436 235 128 8 chr13 111298329 111298462 -8985850 + B1F1 SINE Alu 1 149 0 4 1434 273 57 0 0 chr13 111298469 111298504 -8985808 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 4 1434 213 363 33 0 chr13 111298645 111298736 -8985576 + L2b LINE L2 3262 3355 -20 4 1434 762 93 0 0 chr13 111298825 111298933 -8985379 + (TCTCC)n Simple_repeat Simple_repeat 4 111 0 4 1434 229 321 33 74 chr13 111298933 111299045 -8985267 - PB1D10 SINE Alu -8 109 1 4 1434 2022 135 0 68 chr13 111299603 111299954 -8984358 + ORR1A2 LTR MaLR 1 327 0 4 1434 22 0 0 0 chr13 111301732 111301754 -8982558 + AT_rich Low_complexity Low_complexity 1 22 0 4 1434 399 41 0 0 chr13 111302444 111302493 -8981819 + (TATG)n Simple_repeat Simple_repeat 4 52 0 4 1434 363 181 0 0 chr13 111302522 111302594 -8981718 + (CATATA)n Simple_repeat Simple_repeat 3 74 0 4 1434 313 239 40 40 chr13 111302596 111302670 -8981642 + HAL1-3A_ME LINE L1 1975 2048 -810 4 1434 256 281 129 7 chr13 111304172 111304319 -8979993 - MER33 DNA MER1_type -25 299 135 4 1434 613 223 18 24 chr13 111304655 111304846 -8979466 - L1_Rod LINE L1 -1271 4872 4635 4 1434 4149 215 32 72 chr13 111304834 111305746 -8978566 + Lx9 LINE L1 6489 7414 -230 4 1434 423 0 0 0 chr13 111305746 111305793 -8978519 + (CA)n Simple_repeat Simple_repeat 2 48 0 4 1434 4149 215 32 72 chr13 111305793 111306083 -8978229 + Lx9 LINE L1 7415 7643 -1 4 1434 1409 291 85 17 chr13 111306089 111306666 -8977646 - Lx8 LINE L1 -617 6856 6241 4 1434 1281 61 0 0 chr13 111307066 111307246 -8977066 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 4 1434 1834 195 2 39 chr13 111307329 111307794 -8976518 + Lx4B LINE L1 6431 6931 -119 4 1434 226 188 21 0 chr13 111307808 111307856 -8976456 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 4 1434 208 314 30 76 chr13 111308747 111308878 -8975434 - MIRb SINE MIR -134 134 10 4 1434 252 0 0 0 chr13 111308898 111308926 -8975386 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1434 201 74 0 0 chr13 111308926 111308952 -8975360 + (CG)n Simple_repeat Simple_repeat 2 28 0 4 1434 972 248 5 15 chr13 111310560 111310765 -8973547 + B3 SINE B2 1 203 -13 4 1434 414 0 0 0 chr13 111310774 111310820 -8973492 + (CA)n Simple_repeat Simple_repeat 2 47 0 4 1434 1439 189 30 9 chr13 111310829 111311160 -8973152 + Lx9 LINE L1 7307 7644 0 4 1434 275 385 92 0 chr13 111311800 111311930 -8972382 + MIR SINE MIR 2 143 -119 4 1434 237 132 0 0 chr13 111312220 111312258 -8972054 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 4 1434 342 345 28 67 chr13 111312395 111312610 -8971702 + LTR33 LTR ERVL 229 450 -65 4 1434 694 274 81 47 chr13 111313184 111313217 -8971095 - ID_B1 SINE B4 -6 218 187 4 1434 851 268 89 47 chr13 111313217 111313577 -8970735 - MTE2a LTR MaLR -2 377 3 4 1434 694 274 81 47 chr13 111313577 111313754 -8970558 - ID_B1 SINE B4 -38 186 1 4 1434 2481 121 51 44 chr13 111314272 111314722 -8969590 + RLTR11B LTR ERVK 1 453 0 4 1434 290 258 50 0 chr13 111314868 111314988 -8969324 - Lx9 LINE L1 -27 7617 7492 4 1434 588 175 10 0 chr13 111315479 111315582 -8968730 + B3 SINE B2 1 104 -112 4 1434 1050 170 46 116 chr13 111315577 111315836 -8968476 + RLTR11B LTR ERVK 195 435 -18 4 1434 460 267 9 9 chr13 111315832 111315938 -8968374 + B3 SINE B2 107 212 -4 4 1434 861 45 0 0 chr13 111316109 111316219 -8968093 + (CCA)n Simple_repeat Simple_repeat 3 112 0 4 1434 398 189 0 21 chr13 111316233 111316330 -8967982 + CT-rich Low_complexity Low_complexity 3 97 0 4 1434 290 132 0 0 chr13 111317513 111317566 -8966746 - Lx9 LINE L1 -5 7639 7587 4 1434 450 0 0 0 chr13 111317665 111317715 -8966597 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1434 409 371 55 30 chr13 111317967 111318328 -8965984 - L1M5 LINE L1 -3322 2824 2455 4 1434 23 54 0 0 chr13 111318606 111318643 -8965669 + AT_rich Low_complexity Low_complexity 1 37 0 4 1434 210 118 0 0 chr13 111319330 111319364 -8964948 + (CAT)n Simple_repeat Simple_repeat 1 34 0 4 1434 495 0 0 0 chr13 111319490 111319545 -8964767 + (TA)n Simple_repeat Simple_repeat 2 56 0 4 1434 1601 22 0 0 chr13 111320131 111320310 -8964002 + B2_Mm1t SINE B2 1 179 -14 4 1434 261 0 0 0 chr13 111320310 111320339 -8963973 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1434 284 248 35 26 chr13 111320630 111320746 -8963566 - L1MA6 LINE L1 -46 6254 6138 4 1434 255 260 0 0 chr13 111320975 111321052 -8963260 - L1M2 LINE L1 -440 5860 5784 4 1434 402 225 27 0 chr13 111321083 111321194 -8963118 + Lx5 LINE L1 6937 7050 0 4 1434 189 147 0 0 chr13 111321207 111321241 -8963071 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1434 443 308 50 32 chr13 111321304 111321522 -8962790 - L1M2 LINE L1 -1454 4689 4468 4 1434 1412 234 76 41 chr13 111322079 111322538 -8961774 + RMER1C Other Other 860 1334 -8 5 1434 207 114 0 0 chr13 111324837 111324872 -8959440 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1434 270 58 77 0 chr13 111325669 111325721 -8958591 + (TTATA)n Simple_repeat Simple_repeat 2 57 0 5 1434 42 77 0 0 chr13 111326387 111326478 -8957834 + AT_rich Low_complexity Low_complexity 1 91 0 5 1434 1419 255 208 17 chr13 111326606 111327145 -8957167 + Lx6 LINE L1 6761 7402 -58 5 1434 25 51 0 0 chr13 111327211 111327250 -8957062 + AT_rich Low_complexity Low_complexity 1 39 0 5 1434 359 218 0 0 chr13 111329179 111329257 -8955055 + Lx9 LINE L1 6946 7023 -621 5 1434 672 310 30 15 chr13 111329275 111329606 -8954706 + Lx9 LINE L1 7125 7460 -184 5 1434 438 20 0 0 chr13 111329606 111329657 -8954655 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1434 324 70 0 0 chr13 111329792 111329835 -8954477 + (A)n Simple_repeat Simple_repeat 1 43 0 5 1434 183 329 82 0 chr13 111331551 111331636 -8952676 - MIR3 SINE MIR -3 205 114 5 1434 303 332 52 24 chr13 111331647 111331860 -8952452 + L2a LINE L2 2394 2612 -807 5 1434 301 318 114 76 chr13 111331832 111332094 -8952218 + L2a LINE L2 3081 3403 -23 5 1434 189 0 0 0 chr13 111332108 111332129 -8952183 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1434 373 325 0 41 chr13 111332629 111332751 -8951561 - MLT1E1A LTR MaLR -214 466 350 5 1434 1357 297 23 32 chr13 111332851 111333380 -8950932 + Lx8 LINE L1 6840 7363 -110 5 1434 27 0 0 0 chr13 111334203 111334230 -8950082 + AT_rich Low_complexity Low_complexity 1 27 0 5 1434 315 49 0 0 chr13 111335142 111335183 -8949129 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 5 1434 384 171 0 0 chr13 111337037 111337119 -8947193 + (CA)n Simple_repeat Simple_repeat 2 83 0 5 1434 405 0 0 0 chr13 111337979 111338024 -8946288 + (TG)n Simple_repeat Simple_repeat 1 45 0 5 1434 303 253 0 0 chr13 111338030 111338094 -8946218 - ID_B1 SINE B4 -147 145 85 5 1434 22 56 0 0 chr13 111338241 111338277 -8946035 + AT_rich Low_complexity Low_complexity 1 36 0 5 1434 441 179 0 0 chr13 111338308 111338392 -8945920 + (CATA)n Simple_repeat Simple_repeat 1 84 0 5 1434 231 237 18 110 chr13 111338871 111338980 -8945332 - LTR16A1 LTR ERVL -92 364 266 5 1434 409 322 112 15 chr13 111339375 111339634 -8944678 - MLT1D LTR MaLR -17 488 205 5 1434 279 171 58 58 chr13 111340557 111340644 -8943668 + (CTGTG)n Simple_repeat Simple_repeat 1 87 0 5 1434 1529 158 16 92 chr13 111341413 111341727 -8942585 + RMER13B LTR ERVK 1 290 -618 5 1434 358 149 14 56 chr13 111341726 111341797 -8942515 - RMER13B LTR ERVK -840 68 1 5 1434 426 39 0 0 chr13 111342351 111342403 -8941909 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1434 320 77 19 0 chr13 111343361 111343413 -8940899 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1434 531 315 45 15 chr13 111343419 111343619 -8940693 - B4A SINE B4 -6 286 81 5 1434 195 167 0 0 chr13 111343624 111343666 -8940646 + (TG)n Simple_repeat Simple_repeat 1 42 0 5 1434 282 56 0 0 chr13 111343749 111343785 -8940527 + (T)n Simple_repeat Simple_repeat 1 36 0 5 1434 814 94 156 0 chr13 111343785 111343913 -8940399 - B1_Mus1 SINE Alu 0 148 1 5 1434 327 303 22 78 chr13 111343925 111344104 -8940208 - B4A SINE B4 -90 202 34 5 1434 310 288 58 50 chr13 111344301 111344440 -8939872 + B1_Mur2 SINE Alu 2 141 -8 5 1434 207 0 0 0 chr13 111345235 111345258 -8939054 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5 1434 624 248 59 26 chr13 111345796 111345949 -8938363 + MLT1J LTR MaLR 143 300 -212 5 1434 534 16 0 0 chr13 111346949 111347012 -8937300 + (GA)n Simple_repeat Simple_repeat 1 63 0 5 1434 234 160 0 39 chr13 111347589 111347641 -8936671 + T-rich Low_complexity Low_complexity 1 50 0 5 1434 586 37 12 12 chr13 111347917 111347999 -8936313 + (GGGA)n Simple_repeat Simple_repeat 1 82 0 5 1434 392 283 25 16 chr13 111349403 111349525 -8934787 - PB1 SINE Alu -4 123 1 5 1434 233 325 0 24 chr13 111350448 111350530 -8933782 + (CATATA)n Simple_repeat Simple_repeat 4 83 0 5 1434 339 339 66 79 chr13 111350530 111350859 -8933453 - ORR1E LTR MaLR 0 370 20 5 1434 310 260 206 15 chr13 111352096 111352295 -8932017 - Lx8 LINE L1 -74 7399 7163 5 1434 322 253 47 35 chr13 111352578 111352664 -8931648 + B1F1 SINE Alu 40 126 -23 5 1434 531 0 0 0 chr13 111353506 111353565 -8930747 + (CA)n Simple_repeat Simple_repeat 1 59 0 5 1434 246 32 0 0 chr13 111355081 111355112 -8929200 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1434 305 280 99 18 chr13 111355238 111355394 -8928918 - MIR SINE MIR -8 260 94 5 1434 299 138 35 0 chr13 111356363 111356421 -8927891 + (TATG)n Simple_repeat Simple_repeat 1 60 0 5 1434 416 305 175 0 chr13 111356683 111356837 -8927475 + B3A SINE B2 2 182 -16 5 1434 2697 212 49 10 chr13 111356870 111357498 -8926814 + Lx7 LINE L1 6610 7262 -434 5 1434 423 56 0 0 chr13 111358448 111358502 -8925810 + (CA)n Simple_repeat Simple_repeat 1 54 0 5 1434 550 209 78 0 chr13 111359673 111359788 -8924524 + RSINE1 SINE B4 6 129 -36 5 1434 22 35 0 0 chr13 111360022 111360051 -8924261 + AT_rich Low_complexity Low_complexity 1 29 0 5 1434 232 276 0 0 chr13 111360363 111360439 -8923873 - L1_Rod LINE L1 -82 5765 5690 5 1434 621 321 118 4 chr13 111360440 111360678 -8923634 - MLT1A0 LTR MaLR -55 310 46 5 1434 240 344 45 87 chr13 111360975 111361239 -8923073 - L2c LINE L2 -6 3381 3129 5 1434 220 286 104 52 chr13 111361305 111361401 -8922911 - L2c LINE L2 -488 2931 2831 5 1434 231 88 0 0 chr13 111362271 111362305 -8922007 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1434 516 84 0 0 chr13 111362305 111362388 -8921924 + (GA)n Simple_repeat Simple_repeat 2 84 0 5 1434 496 287 21 67 chr13 111362849 111363043 -8921269 + B3A SINE B2 14 198 0 5 1434 1178 49 0 0 chr13 111363046 111363188 -8921124 + B1_Mus1 SINE Alu 1 142 -6 5 1434 428 0 0 19 chr13 111363192 111363245 -8921067 + (TAAA)n Simple_repeat Simple_repeat 2 53 0 5 1434 314 346 73 67 chr13 111363523 111363823 -8920489 - L1M5 LINE L1 -323 5801 5500 5 1434 207 0 0 0 chr13 111364861 111364884 -8919428 + (TCC)n Simple_repeat Simple_repeat 2 24 0 5 1434 483 18 0 0 chr13 111364884 111364940 -8919372 + (TC)n Simple_repeat Simple_repeat 2 57 0 5 1434 207 0 0 0 chr13 111364940 111364962 -8919350 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1434 314 344 0 0 chr13 111366375 111366497 -8917815 - PB1 SINE Alu -4 123 2 5 1434 307 303 10 39 chr13 111366700 111366803 -8917509 + PB1D10 SINE Alu 18 117 0 5 1434 230 313 29 58 chr13 111366980 111367153 -8917159 - L1ME1 LINE L1 -166 6013 5846 5 1434 428 280 146 47 chr13 111367302 111367576 -8916736 - L1ME1 LINE L1 -610 5569 5269 5 1434 212 125 20 59 chr13 111367636 111367687 -8916625 + T-rich Low_complexity Low_complexity 5 53 0 5 1434 393 0 0 50 chr13 111367924 111367984 -8916328 + (TTTTG)n Simple_repeat Simple_repeat 4 60 0 5 1434 526 313 8 110 chr13 111370915 111371083 -8913229 + B3A SINE B2 2 163 -53 5 1434 450 0 0 0 chr13 111371083 111371133 -8913179 + (CA)n Simple_repeat Simple_repeat 2 51 0 5 1434 516 313 8 110 chr13 111371133 111371201 -8913111 + B3 SINE B2 164 214 -2 5 1434 6700 65 1 40 chr13 111372354 111373274 -8911038 + L1_Mus3 LINE L1 5749 6632 -6 5 1434 21 0 0 0 chr13 111375076 111375097 -8909215 + AT_rich Low_complexity Low_complexity 1 21 0 5 1434 237 203 43 0 chr13 111375169 111375238 -8909074 + L1MA7 LINE L1 6172 6243 -48 5 1434 541 264 56 0 chr13 111376144 111376322 -8907990 + MER53 DNA hAT 2 189 -4 5 1434 267 31 0 0 chr13 111377090 111377122 -8907190 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 5 1434 32 67 0 0 chr13 111378080 111378140 -8906172 + AT_rich Low_complexity Low_complexity 1 60 0 5 1434 188 218 179 0 chr13 111379647 111379725 -8904587 - MIR SINE MIR -21 241 150 5 1434 1194 119 119 0 chr13 111379832 111380034 -8904278 + URR1A DNA MER1_type 1 226 0 5 1434 657 38 0 0 chr13 111381055 111381135 -8903177 + (TC)n Simple_repeat Simple_repeat 2 81 0 5 1434 4613 189 65 32 chr13 111382010 111383005 -8901307 + RLTR25B LTR ERVK 1 1028 0 5 1434 230 329 91 54 chr13 111383855 111384208 -8900104 - L1MEg2 LINE L1 -5962 490 125 5 1434 554 144 178 0 chr13 111384464 111384582 -8899730 + B1_Mus2 SINE Alu 2 140 -7 5 1434 308 379 0 0 chr13 111384712 111384807 -8899505 - B4A SINE B4 -8 284 190 5 1434 1838 102 90 17 chr13 111386326 111386625 -8897687 - ORR1A4 LTR MaLR -8 321 1 5 1434 2007 162 64 0 chr13 111387225 111387583 -8896729 + RLTR14 LTR ERV1 1 381 -1 5 1434 292 298 84 25 chr13 111389187 111389397 -8894915 - MIR SINE MIR -44 218 5 5 1434 487 296 86 77 chr13 111389804 111389980 -8894332 + MTD LTR MaLR 169 352 -67 5 1434 186 43 0 0 chr13 111389980 111390003 -8894309 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 5 1434 487 296 86 77 chr13 111390003 111390060 -8894252 + MTD LTR MaLR 353 404 -15 5 1434 919 277 78 31 chr13 111390112 111390564 -8893748 - L1MA5 LINE L1 -1577 5896 5452 5 1434 364 246 144 60 chr13 111390802 111390993 -8893319 - Charlie10a DNA MER1_type -57 185 1 5 1434 203 254 0 63 chr13 111391026 111391089 -8893223 + MIRb SINE MIR 21 79 -189 5 1434 279 0 0 0 chr13 111391191 111391222 -8893090 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1434 723 44 0 0 chr13 111391291 111391382 -8892930 + (TG)n Simple_repeat Simple_repeat 2 92 0 5 1434 291 51 0 0 chr13 111391509 111391525 -8892787 + (TA)n Simple_repeat Simple_repeat 1 16 0 5 1434 282 29 0 0 chr13 111391525 111391560 -8892752 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1434 291 51 0 0 chr13 111391560 111391582 -8892730 + (TA)n Simple_repeat Simple_repeat 1 22 0 5 1434 753 22 0 0 chr13 111393252 111393343 -8890969 + (CCCTAA)n Simple_repeat Simple_repeat 6 96 0 5 1434 22 0 0 0 chr13 111394008 111394030 -8890282 + AT_rich Low_complexity Low_complexity 1 22 0 5 1434 432 55 0 0 chr13 111394882 111394937 -8889375 + (TG)n Simple_repeat Simple_repeat 2 56 0 6 1434 439 215 8 8 chr13 111394937 111395059 -8889253 + (TA)n Simple_repeat Simple_repeat 2 123 0 6 1434 231 301 0 14 chr13 111395387 111395461 -8888851 + GA-rich Low_complexity Low_complexity 1 73 0 6 1434 539 291 12 98 chr13 111397714 111397969 -8886343 - RMER17C LTR ERVK -32 378 146 6 1434 447 19 0 0 chr13 111397970 111398022 -8886290 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 1434 455 0 18 0 chr13 111398629 111398684 -8885628 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1434 1205 86 0 6 chr13 111398996 111399159 -8885153 + B2_Mm2 SINE B2 6 167 -28 6 1434 1620 49 0 0 chr13 111399520 111399888 -8884424 + (TG)n Simple_repeat Simple_repeat 1 368 0 6 1434 1049 118 6 0 chr13 111400153 111400322 -8883990 + (TTCTC)n Simple_repeat Simple_repeat 1 170 0 6 1434 40544 27 4 7 chr13 111400322 111406507 -8877805 - L1Md_T LINE L1 -10 6572 411 6 1434 373 290 109 68 chr13 111407414 111407662 -8876650 - MLT1C LTR MaLR -192 275 18 6 1434 591 27 0 0 chr13 111408004 111408077 -8876235 + (GA)n Simple_repeat Simple_repeat 2 74 0 6 1434 366 376 23 29 chr13 111408150 111408325 -8875987 - MER45A DNA Tip100 -4 174 1 6 1434 492 314 86 26 chr13 111408346 111408780 -8875532 - L1ME2 LINE L1 -306 5858 5388 6 1434 697 282 32 37 chr13 111408886 111409103 -8875209 + B3 SINE B2 1 216 0 6 1434 225 298 39 78 chr13 111409119 111409221 -8875091 + LTR86A1 LTR ERVL 324 421 -92 6 1434 902 313 82 19 chr13 111409266 111409732 -8874580 - L1MC2 LINE L1 -199 6145 5651 6 1434 21 0 0 0 chr13 111409874 111409895 -8874417 + AT_rich Low_complexity Low_complexity 1 21 0 6 1434 521 229 37 0 chr13 111410378 111410487 -8873825 + PB1D9 SINE Alu 1 113 -7 6 1434 265 320 0 10 chr13 111410504 111410602 -8873710 + L1MA8 LINE L1 5879 5975 -316 6 179 2666 273 70 40 chr13 111410937 111412206 -8872106 + Lx8 LINE L1 4636 5976 -1668 6 1435 532 273 73 17 chr13 111412422 111412577 -8871735 + MTD LTR MaLR 16 181 -219 6 1435 2098 186 25 10 chr13 111412569 111412971 -8871341 - MTC LTR MaLR -13 408 1 6 1435 1283 214 33 19 chr13 111412971 111413234 -8871078 + MTD LTR MaLR 153 419 0 6 1435 342 321 12 0 chr13 111413396 111413480 -8870832 + Lx8 LINE L1 6217 6301 -1172 6 1435 1929 301 83 23 chr13 111413499 111414292 -8870020 + Lx8 LINE L1 6633 7473 0 6 1435 691 313 104 3 chr13 111415378 111415743 -8868569 + L1MD3 LINE L1 5518 5919 -2076 6 1435 965 261 46 103 chr13 111415799 111416187 -8868125 - MTEa LTR MaLR -13 366 1 6 1435 397 313 97 28 chr13 111416209 111416426 -8867886 + L1MD3 LINE L1 6012 6243 -101 6 1435 220 195 86 49 chr13 111417849 111417930 -8866382 - B1_Mm SINE Alu -1 146 63 6 1435 208 258 32 32 chr13 111419007 111419078 -8865234 + L3b LINE CR1 4416 4506 -2 6 1435 291 193 52 26 chr13 111419116 111419270 -8865042 + (TATAA)n Simple_repeat Simple_repeat 2 159 0 6 1435 181 175 15 31 chr13 111419751 111419816 -8864496 + CT-rich Low_complexity Low_complexity 5 68 0 6 1435 248 282 94 31 chr13 111419867 111419995 -8864317 - L1MA9 LINE L1 -392 5920 5785 6 1435 553 271 79 79 chr13 111420024 111420240 -8864072 - B3 SINE B2 0 216 1 6 1435 562 303 73 21 chr13 111420905 111421097 -8863215 + B3 SINE B2 8 209 -7 6 1435 5618 50 18 1 chr13 111421141 111421809 -8862503 - L1Md_F2 LINE L1 -1 6581 5903 6 1435 234 0 0 0 chr13 111422288 111422314 -8861998 + (GA)n Simple_repeat Simple_repeat 2 27 0 6 1435 247 303 66 36 chr13 111424220 111424357 -8859955 + MIRb SINE MIR 29 169 -99 6 1435 1656 169 14 73 chr13 111424582 111424926 -8859386 - ORR1A4 LTR MaLR 0 329 6 6 1435 352 314 118 31 chr13 111425230 111425615 -8858697 + MLT1D LTR MaLR 103 505 0 6 1435 266 206 67 27 chr13 111425735 111425810 -8858502 + L1MEg LINE L1 1299 1376 -4708 6 1435 233 270 46 31 chr13 111426078 111426143 -8858169 + MamGypLTR1d LTR Gypsy 68 133 -680 6 1435 281 42 0 0 chr13 111428071 111428119 -8856193 - L1_Mus1 LINE L1 -58 6509 6462 6 1435 1699 62 0 0 chr13 111428121 111428331 -8855981 + L1_Mus1 LINE L1 6090 6299 -268 6 1435 182 37 37 0 chr13 111428874 111428901 -8855411 + (TCC)n Simple_repeat Simple_repeat 2 29 0 6 1435 1367 301 9 26 chr13 111429047 111429466 -8854846 + RMER1B Other Other 1 412 -654 6 1435 3348 220 74 22 chr13 111429452 111430514 -8853798 + RMER1A Other Other 74 1019 -11 6 1435 345 319 50 25 chr13 111431230 111431349 -8852963 - B4 SINE B4 0 292 171 6 1435 180 179 39 0 chr13 111431403 111431435 -8852877 + (TA)n Simple_repeat Simple_repeat 2 34 0 6 1435 270 0 0 0 chr13 111431435 111431465 -8852847 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1435 180 179 39 0 chr13 111431465 111431473 -8852839 + (TA)n Simple_repeat Simple_repeat 2 9 0 6 1435 221 98 0 24 chr13 111431473 111431515 -8852797 + (TG)n Simple_repeat Simple_repeat 2 42 0 6 1435 180 179 39 0 chr13 111431515 111431551 -8852761 + (TA)n Simple_repeat Simple_repeat 2 39 0 6 1435 26 0 0 0 chr13 111432270 111432296 -8852016 + AT_rich Low_complexity Low_complexity 1 26 0 6 1435 638 102 0 8 chr13 111432327 111432446 -8851866 + (GA)n Simple_repeat Simple_repeat 2 119 0 6 1435 23 54 0 0 chr13 111432995 111433032 -8851280 + AT_rich Low_complexity Low_complexity 1 37 0 6 1435 23 0 0 0 chr13 111434659 111434682 -8849630 + AT_rich Low_complexity Low_complexity 1 23 0 6 1435 358 325 85 52 chr13 111434942 111435142 -8849170 - MIR SINE MIR -23 239 44 6 1435 673 254 14 7 chr13 111435531 111435670 -8848642 + B3A SINE B2 1 140 -58 6 1435 570 155 23 11 chr13 111435672 111435848 -8848464 + (TCTCTG)n Simple_repeat Simple_repeat 1 178 0 6 1435 845 120 0 22 chr13 111435860 111436039 -8848273 + (TCTCTG)n Simple_repeat Simple_repeat 4 178 0 6 1435 210 105 0 0 chr13 111436087 111436125 -8848187 + (CAGAGA)n Simple_repeat Simple_repeat 6 43 0 6 1435 191 125 25 0 chr13 111436681 111436721 -8847591 + (TA)n Simple_repeat Simple_repeat 1 41 0 6 1435 23 0 0 0 chr13 111436745 111436768 -8847544 + AT_rich Low_complexity Low_complexity 1 23 0 6 1435 1154 138 91 14 chr13 111436792 111437012 -8847300 - Lx2A1 LINE L1 -6 7002 6766 6 1435 257 250 78 20 chr13 111437090 111437163 -8847149 - MamGypLTR1a LTR Gypsy -10 774 695 6 1435 345 24 0 0 chr13 111437163 111437205 -8847107 + (TTTTG)n Simple_repeat Simple_repeat 4 45 0 6 1435 257 250 78 20 chr13 111437205 111437233 -8847079 - MamGypLTR1a LTR Gypsy -90 694 667 6 1435 193 321 126 21 chr13 111437672 111437815 -8846497 + MIR SINE MIR 2 159 -103 6 1435 278 258 153 10 chr13 111439187 111439285 -8845027 + L2a LINE L2 3315 3426 0 6 1435 216 0 0 0 chr13 111440553 111440577 -8843735 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1435 936 106 0 0 chr13 111440577 111440837 -8843475 + (GA)n Simple_repeat Simple_repeat 1 260 0 6 1435 1041 330 106 23 chr13 111441839 111442357 -8841955 + MLT1F1 LTR MaLR 1 561 -8 6 1435 197 159 23 0 chr13 111443259 111443303 -8841009 + L3 LINE CR1 2729 2773 -1716 6 1435 940 228 197 10 chr13 111444497 111444807 -8839505 + ORR1D2 LTR MaLR 1 368 -2 6 1435 264 30 0 0 chr13 111445652 111445685 -8838627 + (TC)n Simple_repeat Simple_repeat 2 34 0 6 1435 342 314 84 73 chr13 111445928 111446189 -8838123 + ORR1E LTR MaLR 96 359 0 6 1435 964 176 30 50 chr13 111446510 111446708 -8837604 - URR1A DNA MER1_type 0 226 33 6 1435 392 106 0 29 chr13 111446830 111446898 -8837414 + (GGA)n Simple_repeat Simple_repeat 2 67 0 6 1435 347 327 9 36 chr13 111447295 111447406 -8836906 + PB1 SINE Alu 1 108 -19 6 1435 423 328 33 47 chr13 111447515 111447726 -8836586 + MER20 DNA MER1_type 7 214 -5 6 1435 453 163 23 0 chr13 111447847 111447933 -8836379 - URR1B DNA MER1_type 0 225 138 6 1435 2572 176 21 2 chr13 111447933 111448450 -8835862 - L1_Mm LINE L1 -517 5366 4840 6 1435 338 82 0 0 chr13 111448445 111448494 -8835818 + L1_Mur2 LINE L1 4376 4424 -1453 6 1435 2797 172 25 10 chr13 111448494 111449010 -8835302 + Lx LINE L1 6124 6647 -7 6 1435 340 158 0 0 chr13 111449012 111449069 -8835243 - URR1B DNA MER1_type -80 145 89 6 1435 387 174 52 52 chr13 111449102 111449199 -8835113 - URR1B DNA MER1_type -40 185 89 6 1435 22389 146 31 5 chr13 111449199 111455332 -8828980 + L1_Mus4 LINE L1 357 6636 0 6 1435 361 107 284 74 chr13 111455336 111455369 -8828943 - URR1B DNA MER1_type -118 107 80 6 1435 1933 119 21 59 chr13 111455369 111455709 -8828603 + ORR1A2 LTR MaLR 1 327 0 6 1435 361 107 284 74 chr13 111455709 111455756 -8828556 - URR1B DNA MER1_type -146 79 10 6 1435 213 94 0 0 chr13 111456047 111456079 -8828233 + (T)n Simple_repeat Simple_repeat 1 32 0 6 1435 237 196 0 0 chr13 111456783 111456834 -8827478 + (TG)n Simple_repeat Simple_repeat 1 51 0 6 1435 257 0 30 0 chr13 111457061 111457094 -8827218 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1435 234 0 0 0 chr13 111457436 111457462 -8826850 + (TG)n Simple_repeat Simple_repeat 1 26 0 6 1435 334 295 21 0 chr13 111458770 111458865 -8825447 + MLT1C LTR MaLR 83 179 -288 6 1435 401 351 83 64 chr13 111458869 111459134 -8825178 + B4 SINE B4 1 270 -22 6 1435 426 79 0 0 chr13 111459202 111459265 -8825047 + (CA)n Simple_repeat Simple_repeat 1 63 0 6 1435 2055 154 73 118 chr13 111459723 111460116 -8824196 - RLTR31_Mm LTR ERVK 0 561 176 6 1435 1224 54 0 0 chr13 111460116 111460263 -8824049 + B1_Mus2 SINE Alu 1 147 0 6 1435 2055 154 73 118 chr13 111460263 111460456 -8823856 - RLTR31_Mm LTR ERVK -386 175 1 6 1435 325 86 0 33 chr13 111461009 111461069 -8823243 + (TTTTG)n Simple_repeat Simple_repeat 1 58 0 6 1435 544 182 268 19 chr13 111462550 111462707 -8821605 + B3 SINE B2 2 197 -19 6 1435 634 291 116 18 chr13 111464643 111464867 -8819445 - MLT1B LTR MaLR -14 376 131 6 1435 1257 218 66 20 chr13 111464877 111465181 -8819131 - RMER1B Other Other -703 363 46 6 1435 634 299 128 42 chr13 111466513 111466778 -8817534 + B4A SINE B4 1 288 -4 6 1435 231 267 17 0 chr13 111466799 111466859 -8817453 + (CA)n Simple_repeat Simple_repeat 2 62 0 6 1435 1981 160 65 0 chr13 111467765 111468134 -8816178 + ORR1B1 LTR MaLR 2 394 0 6 1435 305 308 21 63 chr13 111468135 111468277 -8816035 - MIR SINE MIR -63 199 64 6 1435 252 148 23 58 chr13 111468290 111468376 -8815936 + (TATAA)n Simple_repeat Simple_repeat 5 87 0 6 1435 348 43 0 0 chr13 111468510 111468556 -8815756 + (T)n Simple_repeat Simple_repeat 1 46 0 7 1435 361 316 25 69 chr13 111469095 111469255 -8815057 - MER5B DNA MER1_type -25 153 1 7 1435 23 54 0 0 chr13 111470443 111470480 -8813832 + AT_rich Low_complexity Low_complexity 1 37 0 7 1435 224 318 76 57 chr13 111470816 111470973 -8813339 - MIRb SINE MIR -66 202 43 7 1435 1226 180 5 31 chr13 111472001 111472225 -8812087 - URR1B DNA MER1_type 0 225 8 7 1435 596 26 13 0 chr13 111472278 111472356 -8811956 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 7 1435 3087 67 2 0 chr13 111473046 111473464 -8810848 - L1_Mus1 LINE L1 -45 6522 6104 7 1435 315 0 0 0 chr13 111473690 111473725 -8810587 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1435 639 112 0 0 chr13 111475419 111475517 -8808795 + (CA)n Simple_repeat Simple_repeat 2 99 0 7 1435 224 154 0 0 chr13 111476181 111476220 -8808092 + L2a LINE L2 3354 3392 -34 7 1435 1013 251 58 0 chr13 111476545 111476788 -8807524 - ORR1D2 LTR MaLR -113 257 1 7 1435 336 176 0 0 chr13 111476951 111477019 -8807293 + CT-rich Low_complexity Low_complexity 2 69 0 7 1435 1099 102 0 0 chr13 111477385 111477532 -8806780 - B1_Mus1 SINE Alu 0 148 2 7 1435 488 240 104 0 chr13 111478310 111478435 -8805877 + B1F SINE Alu 4 141 -8 7 1435 1460 294 35 22 chr13 111479470 111480155 -8804157 + L1_Rod LINE L1 4565 5328 -552 7 1435 685 279 160 26 chr13 111480170 111480638 -8803674 + Lx9 LINE L1 7112 7642 -2 7 1435 234 350 65 90 chr13 111480865 111481144 -8803168 - MLT2E LTR ERVL -283 345 74 7 1435 1579 232 46 72 chr13 111483025 111483439 -8800873 - MTD LTR MaLR -14 405 3 7 1435 381 340 74 85 chr13 111483919 111484202 -8800110 - B4A SINE B4 -2 290 11 7 1435 868 123 58 13 chr13 111486317 111486473 -8797839 + URR1A DNA MER1_type 63 225 -1 7 1435 27 0 0 0 chr13 111486654 111486681 -8797631 + AT_rich Low_complexity Low_complexity 1 27 0 7 1435 24 32 0 0 chr13 111487910 111487941 -8796371 + AT_rich Low_complexity Low_complexity 1 31 0 7 1435 553 292 7 0 chr13 111488224 111488361 -8795951 - ID_B1 SINE B4 0 224 87 7 1435 352 284 0 40 chr13 111488272 111488371 -8795941 - PB1D10 SINE Alu -22 95 1 7 1435 2047 344 56 9 chr13 111488932 111489989 -8794323 - Lx8 LINE L1 -93 7380 6275 7 1435 567 236 68 6 chr13 111490452 111490614 -8793698 - L1_Rod LINE L1 -132 5715 5544 7 1435 1101 101 6 11 chr13 111491200 111491381 -8792931 + (TCC)n Simple_repeat Simple_repeat 1 180 0 7 1435 255 170 0 0 chr13 111491383 111491430 -8792882 + CT-rich Low_complexity Low_complexity 3 49 0 7 1435 186 43 0 0 chr13 111492192 111492215 -8792097 + (T)n Simple_repeat Simple_repeat 1 23 0 7 1435 483 18 0 0 chr13 111492412 111492468 -8791844 + (CA)n Simple_repeat Simple_repeat 2 57 0 7 1435 23 54 0 0 chr13 111493024 111493061 -8791251 + AT_rich Low_complexity Low_complexity 1 37 0 7 1435 209 321 111 0 chr13 111493970 111494051 -8790261 + MIR SINE MIR 62 151 -111 7 1435 399 240 30 40 chr13 111494366 111494466 -8789846 - PB1D10 SINE Alu -8 109 11 7 1435 213 339 103 63 chr13 111494400 111494526 -8789786 - B4 SINE B4 -134 158 28 7 1435 392 307 101 16 chr13 111494488 111494617 -8789695 + MER5B DNA MER1_type 12 151 -27 7 1435 21 36 0 0 chr13 111495099 111495127 -8789185 + AT_rich Low_complexity Low_complexity 1 28 0 7 1435 180 365 27 0 chr13 111495481 111495555 -8788757 + L2 LINE L2 2668 2743 -676 7 1435 1183 62 0 0 chr13 111496294 111496440 -8787872 - B1_Mus1 SINE Alu 0 148 3 7 1435 229 83 41 20 chr13 111496852 111496901 -8787411 + (CAAAAA)n Simple_repeat Simple_repeat 1 50 0 7 1435 198 91 0 0 chr13 111497662 111497695 -8786617 + (A)n Simple_repeat Simple_repeat 1 33 0 7 1435 326 289 43 17 chr13 111498396 111498512 -8785800 - Tigger16a DNA Tigger -50 883 765 7 1435 1089 298 115 18 chr13 111499004 111499999 -8784313 - L1MD LINE L1 -2258 3888 2798 7 1435 1244 249 53 28 chr13 111500113 111500543 -8783769 - Lx9 LINE L1 -7 7637 7197 1 1435 1326 187 115 18 chr13 111500588 111500902 -8783410 + RLTR41 LTR ERV1 1 380 -66 2 1435 356 410 87 26 chr13 111500970 111501165 -8783147 - L1MDa LINE L1 -5687 946 740 3 1435 537 290 23 86 chr13 111501254 111501556 -8782756 - L1MDa LINE L1 -6242 391 109 3 1435 264 31 0 0 chr13 111501626 111501658 -8782654 + MT2_Mm LTR ERVL 462 493 0 4 1435 281 39 115 13 chr13 111502167 111502245 -8782067 + (TTATA)n Simple_repeat Simple_repeat 2 87 0 5 1435 408 40 0 0 chr13 111503309 111503359 -8780953 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1435 1006 303 129 30 chr13 111504026 111504499 -8779813 - MER34 LTR ERV1 -3 539 20 7 1435 23173 148 10 6 chr13 111504845 111506121 -8778191 + L1_Mus4 LINE L1 376 1657 -4226 8 1435 5919 55 66 0 chr13 111506121 111506879 -8777433 - RLTR13C2 LTR ERVK 0 808 1 9 1435 23173 150 16 17 chr13 111506879 111511852 -8772460 + L1_Mus4 LINE L1 1658 6624 -12 8 1435 820 221 44 6 chr13 111512092 111512274 -8772038 + B3 SINE B2 1 189 -27 1 1435 1281 69 0 0 chr13 111514000 111514219 -8770093 + (TG)n Simple_repeat Simple_repeat 1 219 0 1 1435 421 336 61 0 chr13 111514219 111514350 -8769962 - RSINE1 SINE B4 -22 143 5 1 1435 309 340 73 80 chr13 111514461 111514811 -8769501 - ORR1E LTR MaLR -22 348 7 1 1435 252 0 0 0 chr13 111515027 111515055 -8769257 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 1 1435 282 410 29 50 chr13 111515093 111515332 -8768980 - MIR SINE MIR -20 242 9 1 1435 225 0 0 0 chr13 111515749 111515774 -8768538 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 1 1435 915 63 0 0 chr13 111516427 111516554 -8767758 + (CA)n Simple_repeat Simple_repeat 2 128 0 1 1435 331 184 61 0 chr13 111517523 111517621 -8766691 + (CATATA)n Simple_repeat Simple_repeat 5 108 0 1 1435 340 254 36 58 chr13 111517810 111517948 -8766364 - Lx8 LINE L1 -269 7204 7070 1 1435 229 342 13 0 chr13 111518071 111518150 -8766162 - MLT1D LTR MaLR -32 473 394 2 1435 369 252 104 30 chr13 111518574 111518709 -8765603 - L1M5 LINE L1 -728 5434 5290 2 1435 694 273 183 21 chr13 111518887 111519314 -8764998 - Lx8 LINE L1 -9 7464 6969 2 1435 27 0 0 0 chr13 111519792 111519819 -8764493 + AT_rich Low_complexity Low_complexity 1 27 0 2 1435 17294 2 0 0 chr13 111519819 111522536 -8761776 - L1Md_A LINE L1 -1 6581 3864 2 1435 760 190 105 11 chr13 111524154 111524335 -8759977 - URR1B DNA MER1_type 0 225 28 2 1435 27 29 0 0 chr13 111524913 111524947 -8759365 + AT_rich Low_complexity Low_complexity 1 34 0 2 1435 311 170 30 50 chr13 111525391 111525490 -8758822 - Lx9 LINE L1 -1 7643 7547 2 1435 266 0 0 29 chr13 111525643 111525678 -8758634 + (TC)n Simple_repeat Simple_repeat 1 34 0 2 1435 486 0 0 0 chr13 111525678 111525731 -8758581 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1435 441 0 0 0 chr13 111526682 111526731 -8757581 + (TA)n Simple_repeat Simple_repeat 2 50 0 3 1435 387 0 0 0 chr13 111526731 111526773 -8757539 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1435 644 323 0 6 chr13 111526802 111526964 -8757348 + B3A SINE B2 6 166 -32 3 1435 723 98 0 0 chr13 111526964 111527087 -8757225 + (TC)n Simple_repeat Simple_repeat 1 123 0 3 1435 288 0 0 0 chr13 111527087 111527118 -8757194 + (CA)n Simple_repeat Simple_repeat 1 32 0 3 1435 706 300 0 21 chr13 111527246 111527440 -8756872 - B3A SINE B2 -1 197 8 3 1435 1445 128 4 0 chr13 111527533 111527760 -8756552 - Lx LINE L1 -7 6647 6420 3 1435 355 209 0 85 chr13 111528569 111528663 -8755649 + MTD LTR MaLR 5 90 -329 3 1435 1286 221 84 36 chr13 111528822 111528985 -8755327 + ORR1D1 LTR MaLR 1 181 -193 3 1435 483 48 0 0 chr13 111528985 111529047 -8755265 + (TC)n Simple_repeat Simple_repeat 1 62 0 3 1435 330 26 0 0 chr13 111529047 111529085 -8755227 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1435 1286 221 84 36 chr13 111529085 111529277 -8755035 + ORR1D1 LTR MaLR 182 373 -1 3 1435 2671 226 100 19 chr13 111529277 111529723 -8754589 + ORR1D1-int LTR MaLR 1 473 -897 3 1435 5232 75 1 1 chr13 111529723 111530415 -8753897 + L1_Mus1 LINE L1 5876 6567 0 4 1435 2671 226 100 19 chr13 111530415 111530650 -8753662 + ORR1D1-int LTR MaLR 474 737 -633 3 1435 1812 224 85 11 chr13 111530661 111530943 -8753369 + ORR1D1-int LTR MaLR 890 1194 -176 3 1435 272 27 27 0 chr13 111530943 111530980 -8753332 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 4 1435 1812 224 85 11 chr13 111530980 111531145 -8753167 + ORR1D1-int LTR MaLR 1195 1369 -1 3 1435 692 212 376 4 chr13 111531145 111531424 -8752888 + ORR1D1 LTR MaLR 1 382 -2 3 1435 227 140 0 20 chr13 111533069 111533120 -8751192 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1435 920 85 11 49 chr13 111534177 111534362 -8749950 + (CCCTAA)n Simple_repeat Simple_repeat 1 178 0 4 1435 1311 28 8 22 chr13 111534378 111534750 -8749562 + (CCCTAA)n Simple_repeat Simple_repeat 1 366 0 4 1435 1949 201 40 3 chr13 111534787 111535157 -8749155 + MTC LTR MaLR 7 390 -31 4 1435 489 17 0 0 chr13 111535345 111535403 -8748909 + (CA)n Simple_repeat Simple_repeat 1 58 0 4 1435 579 29 0 0 chr13 111535695 111535764 -8748548 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 4 1435 285 368 17 52 chr13 111536388 111536560 -8747752 - MLT1A0 LTR MaLR -55 310 145 4 1435 1118 181 75 28 chr13 111538610 111538800 -8745512 - RMER17C LTR ERVK 0 410 214 4 1435 486 0 0 0 chr13 111538800 111538854 -8745458 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1435 1118 181 75 28 chr13 111538854 111538930 -8745382 - RMER17C LTR ERVK -197 213 127 4 1435 798 140 0 0 chr13 111538930 111539109 -8745203 + (CAG)n Simple_repeat Simple_repeat 2 180 0 5 1435 1118 221 38 45 chr13 111539109 111539343 -8744969 - RMER17C LTR ERVK -183 227 1 4 1435 431 259 15 3 chr13 111539463 111539574 -8744738 - PB1D9 SINE Alu -9 118 1 5 1435 243 327 17 43 chr13 111539574 111539663 -8744649 - MLT1A0 LTR MaLR -226 139 54 4 1435 183 298 221 0 chr13 111539711 111539815 -8744497 - MIRc SINE MIR -122 146 20 5 1435 257 260 141 39 chr13 111541050 111541178 -8743134 + Tigger7 DNA MER2_type 2259 2399 -92 5 1435 227 261 32 64 chr13 111541266 111541360 -8742952 - MLT1A1 LTR MaLR -44 364 274 5 1435 1122 182 22 53 chr13 111541411 111541637 -8742675 + URR1B DNA MER1_type 7 225 0 5 1435 356 281 30 64 chr13 111541637 111541667 -8742645 - CYRA11_Mm Unknown Y-chromosome -448 169 147 5 1435 234 376 37 15 chr13 111541648 111541783 -8742529 - ORR1E LTR MaLR -221 138 1 5 1435 267 222 136 0 chr13 111542038 111542119 -8742193 - MTE2a LTR MaLR -282 97 6 5 1436 586 285 36 0 chr13 111542746 111542883 -8741429 + B1_Mur1 SINE Alu 7 148 -1 6 1436 366 323 23 15 chr13 111543220 111543352 -8740960 + MER45R DNA Tip100 4 136 -1445 6 1436 461 308 15 0 chr13 111543568 111543701 -8740611 - ID_B1 SINE B4 0 224 90 6 1436 327 330 10 31 chr13 111543614 111543711 -8740601 - PB1D10 SINE Alu -21 96 2 6 1436 1211 54 6 0 chr13 111545231 111545399 -8738913 + (TG)n Simple_repeat Simple_repeat 2 170 0 6 1436 390 232 0 0 chr13 111545402 111545471 -8738841 - ID4_ SINE ID -14 69 1 6 1436 1329 85 80 0 chr13 111545485 111545684 -8738628 - L1_Mus1 LINE L1 0 6567 6353 6 1436 866 137 7 0 chr13 111545684 111545830 -8738482 + L1_Mus1 LINE L1 5985 6131 -436 6 1436 1073 81 122 0 chr13 111546096 111546268 -8738044 - L1_Mus3 LINE L1 -5 6633 6441 6 1436 460 130 43 0 chr13 111546546 111546661 -8737651 + CT-rich Low_complexity Low_complexity 1 120 0 6 1436 366 314 8 16 chr13 111546665 111546788 -8737524 - ID_B1 SINE B4 0 224 103 7 1436 229 353 51 14 chr13 111546788 111546803 -8737509 - B1F1 SINE Alu 0 149 7 7 1436 935 205 113 52 chr13 111547639 111547948 -8736364 + RLTR15 LTR ERVK 7 334 -25 7 1436 470 346 8 0 chr13 111548965 111549092 -8735220 + RSINE1 SINE B4 5 132 -33 7 1436 531 45 0 0 chr13 111549244 111549310 -8735002 + (TA)n Simple_repeat Simple_repeat 2 67 0 7 1436 238 300 126 57 chr13 111549444 111549603 -8734709 + MER82 DNA MER2_type 322 491 -162 7 1436 819 158 0 0 chr13 111549611 111549757 -8734555 + (TA)n Simple_repeat Simple_repeat 1 146 0 7 1436 1454 323 43 51 chr13 111549923 111550569 -8733743 + MER82 DNA MER2_type 1 641 -12 7 1436 24 67 0 0 chr13 111551320 111551365 -8732947 + AT_rich Low_complexity Low_complexity 1 45 0 7 1436 335 312 27 34 chr13 111551810 111551959 -8732353 + L1MC5 LINE L1 5255 5402 -2480 7 1436 35 0 0 0 chr13 111552427 111552462 -8731850 + AT_rich Low_complexity Low_complexity 1 35 0 7 1436 592 167 312 6 chr13 111552486 111552643 -8731669 - B3 SINE B2 -11 205 1 8 1436 546 315 119 90 chr13 111553057 111554119 -8730193 + L1MC5 LINE L1 6805 7896 -65 7 1436 186 43 0 0 chr13 111554119 111554142 -8730170 + (TA)n Simple_repeat Simple_repeat 2 24 0 8 1436 1164 48 0 20 chr13 111554758 111554894 -8729418 + B1_Mus2 SINE Alu 1 136 -11 8 1436 207 0 0 0 chr13 111554894 111554917 -8729395 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 8 1436 1164 48 0 20 chr13 111554917 111554928 -8729384 + B1_Mus2 SINE Alu 137 145 -2 8 1436 423 87 0 0 chr13 111554928 111554997 -8729315 + (GAAA)n Simple_repeat Simple_repeat 1 69 0 8 1436 390 132 0 0 chr13 111555716 111555792 -8728520 + (TC)n Simple_repeat Simple_repeat 1 76 0 8 1436 542 333 55 20 chr13 111555792 111555994 -8728318 - B3 SINE B2 -4 212 4 8 1436 414 384 41 29 chr13 111556109 111556353 -8727959 + B4A SINE B4 1 247 -45 8 1436 212 103 0 49 chr13 111556392 111556433 -8727879 + (CATA)n Simple_repeat Simple_repeat 4 42 0 8 1436 444 333 78 23 chr13 111557393 111557611 -8726701 + MLT1D LTR MaLR 240 469 -36 8 1436 239 358 43 19 chr13 111557905 111558113 -8726199 - L1MA6 LINE L1 -101 6199 5987 9 1436 1192 41 18 5 chr13 111558130 111558353 -8725959 + (CA)n Simple_repeat Simple_repeat 1 226 0 9 1436 343 272 123 16 chr13 111558353 111558661 -8725651 - L1MA6 LINE L1 -523 5780 5439 9 1436 475 304 64 33 chr13 111558693 111559085 -8725227 - L1MA6 LINE L1 -766 5377 4974 9 1436 959 312 49 41 chr13 111559175 111559563 -8724749 - MER119 DNA MER1_type 0 583 193 9 1436 3152 61 2 5 chr13 111559806 111560203 -8724109 + MTA_Mm LTR MaLR 1 396 0 9 1436 243 293 12 12 chr13 111560430 111560513 -8723799 + ID_B1 SINE B4 70 152 -72 9 1436 216 47 43 86 chr13 111560631 111560701 -8723611 + A-rich Low_complexity Low_complexity 3 69 0 9 1436 323 372 159 18 chr13 111560842 111561233 -8723079 - LTR16C LTR ERVL -1 488 43 9 1436 2948 12 0 0 chr13 111561299 111561640 -8722672 - ORR1A0 LTR MaLR 0 346 6 9 1436 1390 228 65 76 chr13 111561640 111562086 -8722226 - RLTR11A2 LTR ERVK -55 472 32 9 1436 1124 201 130 4 chr13 111562088 111562358 -8721954 - L1_Mur3 LINE L1 -129 5751 5448 9 1436 213 39 0 0 chr13 111563136 111563162 -8721150 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1436 660 145 0 0 chr13 111563268 111563385 -8720927 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 1 1436 222 128 0 0 chr13 111566094 111566133 -8718179 + (A)n Simple_repeat Simple_repeat 1 39 0 1 1436 388 311 113 42 chr13 111566137 111566375 -8717937 - LTR37B LTR ERV1 -158 310 56 1 1436 621 291 6 22 chr13 111566756 111566939 -8717373 - B3A SINE B2 -16 182 3 1 1436 45 34 0 0 chr13 111566989 111567048 -8717264 + AT_rich Low_complexity Low_complexity 1 59 0 1 1436 420 277 188 17 chr13 111567370 111567546 -8716766 - B3 SINE B2 -10 206 1 1 1436 1199 290 189 28 chr13 111567736 111568392 -8715920 - Lx8 LINE L1 -44 7429 6669 1 1436 476 266 16 8 chr13 111568417 111568542 -8715770 - Lx8 LINE L1 -853 6620 6495 1 1436 561 332 5 0 chr13 111568534 111568730 -8715582 - Lx8 LINE L1 -1088 6385 6189 1 1436 458 279 152 9 chr13 111569163 111569394 -8714918 - Lx8 LINE L1 -1548 5925 5662 1 1436 372 43 0 0 chr13 111570375 111570421 -8713891 + (TATG)n Simple_repeat Simple_repeat 3 48 0 1 1436 250 296 9 84 chr13 111570426 111570533 -8713779 - MER31A LTR ERV1 -28 457 359 1 1436 515 232 42 0 chr13 111571198 111571340 -8712972 + Lx9 LINE L1 7046 7193 -451 1 1436 227 197 25 50 chr13 111571367 111571447 -8712865 + Lx8 LINE L1 7368 7445 -28 1 1436 200 35 35 0 chr13 111571482 111571511 -8712801 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1 1436 618 171 0 45 chr13 111571522 111571632 -8712680 + B1_Mm SINE Alu 1 105 -42 1 1436 597 40 0 0 chr13 111571634 111571710 -8712602 + (GA)n Simple_repeat Simple_repeat 2 77 0 1 1436 329 208 40 17 chr13 111572720 111572896 -8711416 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1436 249 213 31 41 chr13 111572910 111573008 -8711304 + (TG)n Simple_repeat Simple_repeat 2 98 0 1 1436 342 0 0 0 chr13 111573045 111573083 -8711229 + (TAA)n Simple_repeat Simple_repeat 3 40 0 1 1436 767 335 19 8 chr13 111573154 111573416 -8710896 + MLT1A0 LTR MaLR 101 365 0 1 1436 2947 49 15 20 chr13 111573695 111574093 -8710219 - MTA_Mm LTR MaLR 0 396 1 1 1436 207 0 0 0 chr13 111574726 111574749 -8709563 + (T)n Simple_repeat Simple_repeat 1 23 0 1 1436 926 336 55 11 chr13 111575070 111575452 -8708860 - MER63B DNA AcHobo -29 407 9 1 1436 1662 226 52 16 chr13 111575773 111576159 -8708153 - MTD LTR MaLR -14 405 6 1 1436 1285 272 103 83 chr13 111576163 111576825 -8707487 - MTD-int LTR MaLR 0 1258 584 1 1436 219 36 0 0 chr13 111576862 111576890 -8707422 + (CAAT)n Simple_repeat Simple_repeat 1 28 0 1 1436 363 96 0 0 chr13 111578340 111578392 -8705920 + (ATG)n Simple_repeat Simple_repeat 2 53 0 1 1436 519 355 56 41 chr13 111578553 111578820 -8705492 - MLT1A0 LTR MaLR -94 271 1 1 1436 39 38 0 0 chr13 111579956 111580009 -8704303 + AT_rich Low_complexity Low_complexity 1 53 0 1 1436 567 66 0 0 chr13 111580090 111580166 -8704146 + (TG)n Simple_repeat Simple_repeat 1 76 0 1 1436 695 344 52 17 chr13 111580185 111580587 -8703725 - Lx8 LINE L1 -232 7241 6826 1 1436 249 33 0 0 chr13 111580705 111580735 -8703577 + (GA)n Simple_repeat Simple_repeat 1 30 0 1 1436 229 246 0 34 chr13 111580738 111580797 -8703515 + (CAGAGA)n Simple_repeat Simple_repeat 4 60 0 1 1436 216 97 0 0 chr13 111581396 111581427 -8702885 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1436 189 0 0 0 chr13 111581425 111581446 -8702866 + (TTTAA)n Simple_repeat Simple_repeat 2 22 0 1 1436 195 292 29 68 chr13 111582253 111582356 -8701956 + L3 LINE CR1 876 974 -3515 1 1436 548 367 0 13 chr13 111583099 111583248 -8701064 + RSINE1 SINE B4 3 149 -16 1 1436 5644 184 45 29 chr13 111583446 111584484 -8699828 + Lx5 LINE L1 881 2049 -3828 1 1436 428 0 19 0 chr13 111584484 111584536 -8699776 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1436 5644 167 60 34 chr13 111584536 111584728 -8699584 + Lx5 LINE L1 2050 2234 -3643 1 1436 2504 115 11 13 chr13 111584728 111585108 -8699204 + Lx LINE L1 6268 6646 -8 1 1436 5644 167 60 34 chr13 111585108 111585433 -8698879 + Lx5 LINE L1 2235 2532 -3345 1 1436 6822 176 63 20 chr13 111585431 111586945 -8697367 + Lx5 LINE L1 5461 7047 -3 1 1436 21 82 0 0 chr13 111590725 111590774 -8693538 + AT_rich Low_complexity Low_complexity 1 49 0 1 1436 960 232 14 0 chr13 111590778 111590989 -8693323 + B3 SINE B2 3 216 0 1 1436 378 329 108 13 chr13 111591604 111591761 -8692551 - MLT1B LTR MaLR -49 341 170 1 1436 350 310 157 6 chr13 111591881 111592053 -8692259 - MTEa LTR MaLR -84 295 98 1 1436 1072 143 11 0 chr13 111592067 111592242 -8692070 - URR1A DNA MER1_type 0 226 50 1 1436 248 362 11 0 chr13 111592262 111592356 -8691956 - MTEa LTR MaLR -284 95 1 1 1436 400 423 82 8 chr13 111593538 111593805 -8690507 + Tigger7 DNA MER2_type 9 295 -2196 1 1436 575 295 65 34 chr13 111593815 111594078 -8690234 + Tigger7 DNA MER2_type 2132 2402 -89 1 1436 531 0 0 0 chr13 111596472 111596531 -8687781 + (TC)n Simple_repeat Simple_repeat 2 60 0 1 1436 375 235 0 0 chr13 111596586 111596684 -8687628 + (TA)n Simple_repeat Simple_repeat 1 98 0 1 1436 443 207 10 5 chr13 111598202 111598411 -8685901 + (TG)n Simple_repeat Simple_repeat 1 210 0 1 1436 219 275 114 14 chr13 111598411 111598481 -8685831 - ID4_ SINE ID -4 79 3 1 1436 22 56 0 0 chr13 111598526 111598562 -8685750 + AT_rich Low_complexity Low_complexity 1 36 0 1 1436 447 330 78 78 chr13 111598644 111598900 -8685412 - MLT1D LTR MaLR 0 505 250 1 1436 270 325 47 8 chr13 111598966 111599093 -8685219 - MLT1D LTR MaLR -495 132 1 1 1436 405 275 111 42 chr13 111599156 111599300 -8685012 - RSINE1 SINE B4 -10 155 2 1 1436 30 0 0 0 chr13 111599305 111599335 -8684977 + AT_rich Low_complexity Low_complexity 1 30 0 1 1436 521 272 27 77 chr13 111599335 111599518 -8684794 - B3A SINE B2 -5 193 20 1 1436 186 324 27 27 chr13 111599754 111599827 -8684485 - MIRc SINE MIR -194 74 2 1 1436 485 214 39 10 chr13 111601169 111601273 -8683039 + B3A SINE B2 4 110 -88 1 1436 696 24 0 0 chr13 111601366 111601448 -8682864 + (TG)n Simple_repeat Simple_repeat 2 83 0 1 1436 337 341 98 99 chr13 111601837 111602391 -8681921 + MLT1H1 LTR MaLR 1 553 -2 1 1436 725 33 11 0 chr13 111602592 111602684 -8681628 + (GGGA)n Simple_repeat Simple_repeat 1 93 0 1 1436 441 0 0 0 chr13 111603310 111603359 -8680953 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1436 213 39 0 0 chr13 111604064 111604090 -8680222 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1436 225 103 33 33 chr13 111604157 111604169 -8680143 + (TAA)n Simple_repeat Simple_repeat 2 13 0 1 1436 508 223 180 8 chr13 111604169 111604291 -8680021 + B1_Mm SINE Alu 3 145 -2 1 1436 225 103 33 33 chr13 111604291 111604338 -8679974 + (TAA)n Simple_repeat Simple_repeat 2 49 0 1 1436 30 0 0 0 chr13 111605437 111605467 -8678845 + AT_rich Low_complexity Low_complexity 1 30 0 1 1436 509 323 25 29 chr13 111605828 111606032 -8678280 - L2a LINE L2 0 3426 3224 1 1436 560 354 77 67 chr13 111606512 111606639 -8677673 - MER68 LTR ERVL -52 511 388 1 1436 252 0 0 0 chr13 111606639 111606667 -8677645 + (CA)n Simple_repeat Simple_repeat 2 29 0 1 1436 560 354 77 67 chr13 111606667 111607045 -8677267 - MER68 LTR ERVL -176 387 1 1 1436 576 0 0 0 chr13 111607897 111607961 -8676351 + (CA)n Simple_repeat Simple_repeat 2 65 0 1 1436 28 0 0 0 chr13 111608152 111608180 -8676132 + AT_rich Low_complexity Low_complexity 1 28 0 1 1436 605 282 79 28 chr13 111608187 111608284 -8676028 - Lx9 LINE L1 -28 7616 7523 1 1436 3042 85 2 0 chr13 111608284 111608683 -8675629 - MTB LTR MaLR 0 400 1 1 1436 605 282 79 28 chr13 111608683 111608903 -8675409 - Lx9 LINE L1 -122 7522 7283 1 1436 567 316 10 72 chr13 111609110 111609318 -8674994 - ID_B1 SINE B4 -28 196 2 1 1436 504 0 0 0 chr13 111610224 111610280 -8674032 + (TG)n Simple_repeat Simple_repeat 1 56 0 1 1436 995 321 20 89 chr13 111610783 111611187 -8673125 + MTEa LTR MaLR 4 379 0 1 1436 348 232 150 10 chr13 111611904 111612004 -8672308 - MER5A1 DNA MER1_type -6 160 47 1 1436 493 339 38 84 chr13 111612249 111612668 -8671644 - MLT2B4 LTR ERVL -16 398 8 1 1436 462 18 0 0 chr13 111612683 111612738 -8671574 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 1 1436 29 70 0 0 chr13 111613046 111613103 -8671209 + AT_rich Low_complexity Low_complexity 1 57 0 1 1436 492 48 0 0 chr13 111613425 111613488 -8670824 + (TAGA)n Simple_repeat Simple_repeat 3 65 0 1 1436 1032 113 0 0 chr13 111614184 111614408 -8669904 + (CA)n Simple_repeat Simple_repeat 1 224 0 1 1436 624 156 353 0 chr13 111615218 111615385 -8668927 - URR1A DNA MER1_type 0 226 1 1 1436 1125 75 7 0 chr13 111615784 111615930 -8668382 - B1_Mus2 SINE Alu 0 147 1 1 1436 716 285 168 48 chr13 111617747 111617785 -8666527 - LTR40a LTR ERVL -2 517 481 1 1436 2533 68 6 6 chr13 111617785 111618127 -8666185 - L1_Mus2 LINE L1 0 6566 6225 1 1436 716 285 168 48 chr13 111618127 111618505 -8665807 - LTR40a LTR ERVL -39 480 53 1 1436 2771 157 57 8 chr13 111618543 111619050 -8665262 + Lx4A LINE L1 6527 7058 0 1 1436 23 33 0 0 chr13 111619082 111619112 -8665200 + AT_rich Low_complexity Low_complexity 1 30 0 1 1436 195 42 0 0 chr13 111619519 111619543 -8664769 + (TTCTG)n Simple_repeat Simple_repeat 4 27 0 1 1436 1009 311 94 58 chr13 111620070 111620477 -8663835 - MTE2a LTR MaLR -14 405 1 1 1436 5834 164 50 10 chr13 111620516 111621558 -8662754 - Lx5 LINE L1 -4 7046 5963 1 1436 183 42 0 0 chr13 111621730 111621754 -8662558 + (TTG)n Simple_repeat Simple_repeat 1 24 0 1 1436 429 175 40 12 chr13 111622078 111622251 -8662061 + (TA)n Simple_repeat Simple_repeat 1 178 0 1 1436 228 94 18 36 chr13 111622313 111622368 -8661944 + (TA)n Simple_repeat Simple_repeat 1 54 0 1 1436 26 30 0 0 chr13 111623189 111623222 -8661090 + AT_rich Low_complexity Low_complexity 1 33 0 1 1436 596 181 0 8 chr13 111623703 111623831 -8660481 + (CCCTAA)n Simple_repeat Simple_repeat 4 130 0 1 1436 261 0 0 0 chr13 111624006 111624035 -8660277 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1436 222 322 77 69 chr13 111624115 111624245 -8660067 + L2b LINE L2 3027 3157 -230 1 1436 3457 28 2 0 chr13 111624632 111625027 -8659285 + MTA_Mm LTR MaLR 1 396 0 1 1436 183 139 0 0 chr13 111625437 111625473 -8658839 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1436 279 343 67 0 chr13 111626319 111626424 -8657888 - PB1D10 SINE Alu -5 112 1 1 1436 21 82 0 0 chr13 111626721 111626770 -8657542 + AT_rich Low_complexity Low_complexity 1 49 0 1 1436 752 182 7 28 chr13 111628529 111628670 -8655642 - B1_Mus1 SINE Alu -5 143 6 1 1436 239 235 0 0 chr13 111630353 111630404 -8653908 + GA-rich Low_complexity Low_complexity 1 51 0 1 1436 587 26 0 26 chr13 111630404 111630482 -8653830 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 2 1436 25 0 0 0 chr13 111630613 111630638 -8653674 + AT_rich Low_complexity Low_complexity 1 25 0 2 1436 1078 209 14 23 chr13 111630728 111630944 -8653368 + B3 SINE B2 3 216 0 2 1436 246 246 16 0 chr13 111631582 111631643 -8652669 + (TATATG)n Simple_repeat Simple_repeat 4 65 0 2 1436 198 0 0 0 chr13 111631697 111631719 -8652593 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1436 238 320 0 0 chr13 111632773 111632851 -8651461 + C-rich Low_complexity Low_complexity 6 83 0 2 1436 291 172 0 0 chr13 111633416 111633474 -8650838 - MurERV4-int LTR ERVK -395 4865 4808 2 1436 4576 206 72 30 chr13 111633471 111634733 -8649579 - MurERV4-int LTR ERVK -2604 2656 1346 2 1436 631 273 92 32 chr13 111635541 111636018 -8648294 - RLTR11A LTR ERVK -2 525 1 2 1436 227 231 154 0 chr13 111636881 111636933 -8647379 + MLT1H LTR MaLR 82 141 -408 2 1436 492 147 8 41 chr13 111637353 111637474 -8646838 + Lx9 LINE L1 7525 7641 -3 2 1436 6977 42 2 3 chr13 111637802 111638693 -8645619 - L1Md_F2 LINE L1 -1 6581 5692 2 1436 2734 254 20 7 chr13 111638935 111639628 -8644684 - Lx5 LINE L1 0 7050 6349 2 1436 1130 139 20 0 chr13 111639642 111639844 -8644468 - Lx2 LINE L1 -22 6975 6770 2 1436 6755 116 11 3 chr13 111639839 111641005 -8643307 - Lx2 LINE L1 -352 6645 5471 2 1436 225 362 63 35 chr13 111641595 111641738 -8642574 - MIRb SINE MIR -93 175 29 2 1436 1358 247 148 14 chr13 111644889 111645005 -8639307 - Lx9 LINE L1 -4 7640 7478 2 1436 357 82 0 0 chr13 111645005 111645054 -8639258 + (TG)n Simple_repeat Simple_repeat 2 50 0 2 1436 1358 247 148 14 chr13 111645054 111645358 -8638954 - Lx9 LINE L1 -167 7477 7146 2 1436 865 186 109 10 chr13 111645358 111645559 -8638753 - URR1A DNA MER1_type -1 225 5 2 1436 1358 247 148 14 chr13 111645559 111645696 -8638616 - Lx9 LINE L1 -499 7145 7008 2 1436 437 325 65 120 chr13 111646158 111646525 -8637787 - MLT1A LTR MaLR -17 357 11 2 1436 290 292 176 19 chr13 111646593 111646755 -8637557 + L1MA4A LINE L1 5370 5589 -723 2 1436 353 289 68 23 chr13 111646817 111647105 -8637207 + L1MA4A LINE L1 5591 5940 -363 2 1436 28 29 0 0 chr13 111648814 111648849 -8635463 + AT_rich Low_complexity Low_complexity 1 35 0 2 1436 232 167 0 0 chr13 111650412 111650460 -8633852 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 2 1436 394 256 200 5 chr13 111651229 111651414 -8632898 + ID_B1 SINE B4 2 222 -2 2 1436 182 196 74 56 chr13 111651480 111651534 -8632778 + L2a LINE L2 3269 3323 -103 2 1436 180 0 0 0 chr13 111652167 111652187 -8632125 + (A)n Simple_repeat Simple_repeat 1 20 0 2 1436 283 341 55 55 chr13 111652756 111652809 -8631503 + LTR16A LTR ERVL 298 345 -106 2 1436 1037 131 6 0 chr13 111652809 111652985 -8631327 + (TTC)n Simple_repeat Simple_repeat 1 177 0 2 1436 283 341 55 55 chr13 111652985 111653077 -8631235 + LTR16A LTR ERVL 346 442 -9 2 1436 1418 58 0 36 chr13 111653169 111653365 -8630947 - L1_Mus1 LINE L1 -1 6566 6378 2 1436 544 284 32 69 chr13 111653665 111653854 -8630458 + B3A SINE B2 1 182 -16 2 1436 223 171 13 13 chr13 111654714 111654791 -8629521 + T-rich Low_complexity Low_complexity 2 78 0 2 1436 196 326 22 55 chr13 111654892 111654983 -8629329 - MIRm SINE MIR -65 211 124 2 1436 574 273 51 46 chr13 111655578 111655774 -8628538 - B3A SINE B2 -1 197 1 2 1436 582 148 32 19 chr13 111656803 111656961 -8627351 + G-rich Low_complexity Low_complexity 5 164 0 2 1436 624 102 0 10 chr13 111660413 111660512 -8623800 - Lx4B LINE L1 -325 6733 6636 2 1436 1133 187 39 53 chr13 111660477 111660759 -8623553 + Lx4A LINE L1 6781 7058 0 2 1436 26 0 0 0 chr13 111660759 111660785 -8623527 + AT_rich Low_complexity Low_complexity 1 26 0 2 1436 248 381 44 88 chr13 111661170 111661443 -8622869 - L2b LINE L2 -78 3297 3037 2 1436 943 285 71 20 chr13 111662643 111662940 -8621372 - MLT1A0 LTR MaLR -6 359 48 2 1436 228 253 0 0 chr13 111663027 111663102 -8621210 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 2 1436 250 261 23 0 chr13 111663133 111663204 -8621108 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 1436 348 24 0 0 chr13 111663204 111663245 -8621067 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1436 250 261 23 0 chr13 111663245 111663261 -8621051 + (TA)n Simple_repeat Simple_repeat 2 17 0 2 1436 188 244 267 0 chr13 111663457 111663547 -8620765 - L2c LINE L2 -25 3362 3249 2 1436 398 227 24 16 chr13 111663830 111664088 -8620224 + (TA)n Simple_repeat Simple_repeat 1 260 0 2 1436 396 321 0 77 chr13 111665324 111665493 -8618819 + MIRb SINE MIR 30 185 -83 2 1436 789 197 0 34 chr13 111665712 111665859 -8618453 - B1_Mur2 SINE Alu -7 142 1 2 1436 275 310 26 109 chr13 111666220 111666412 -8617900 - MTEa LTR MaLR 0 379 204 2 1436 219 154 58 0 chr13 111667765 111667817 -8616495 + A-rich Low_complexity Low_complexity 2 56 0 2 1436 240 324 93 28 chr13 111668016 111668124 -8616188 - MIRb SINE MIR -115 153 36 2 1436 381 310 25 0 chr13 111668999 111669145 -8615167 + MIRb SINE MIR 60 215 -47 2 1436 26 50 0 0 chr13 111669181 111669221 -8615091 + AT_rich Low_complexity Low_complexity 1 40 0 2 1436 197 65 32 0 chr13 111669245 111669276 -8615036 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1436 393 39 0 0 chr13 111672269 111672320 -8611992 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1437 357 24 0 0 chr13 111674040 111674082 -8610230 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 2 1437 320 292 53 15 chr13 111674096 111674228 -8610084 + Lx9 LINE L1 7055 7191 -453 2 1437 405 315 67 13 chr13 111674239 111674464 -8609848 + Lx9 LINE L1 7236 7472 -172 2 1437 516 32 0 0 chr13 111674487 111674549 -8609763 + (CA)n Simple_repeat Simple_repeat 1 62 0 2 1437 422 361 53 102 chr13 111674734 111674999 -8609313 - MTEa LTR MaLR -116 263 12 2 1437 360 0 0 0 chr13 111675301 111675341 -8608971 + (TAAAA)n Simple_repeat Simple_repeat 2 41 0 2 1437 315 103 34 17 chr13 111675754 111675813 -8608499 - MTC LTR MaLR -18 403 344 2 1437 605 333 28 8 chr13 111676028 111676222 -8608090 + B3A SINE B2 16 203 -13 2 1437 243 281 91 30 chr13 111676161 111676293 -8608019 - RMER12 LTR ERVK -490 832 693 2 1437 442 235 101 95 chr13 111676292 111676461 -8607851 + B4A SINE B4 118 287 -5 2 1437 477 0 0 0 chr13 111676497 111676550 -8607762 + (CA)n Simple_repeat Simple_repeat 2 54 0 2 1437 192 77 0 0 chr13 111676552 111676578 -8607734 + (GGA)n Simple_repeat Simple_repeat 2 27 0 2 1437 343 294 128 14 chr13 111676789 111676937 -8607375 - MER5A1 DNA MER1_type 0 166 2 2 1437 247 308 21 21 chr13 111678239 111678332 -8605980 - MLT1A1 LTR MaLR 0 408 316 2 1437 1286 236 151 3 chr13 111678721 111679099 -8605213 + Lx7 LINE L1 6868 7301 -395 2 1437 243 0 0 0 chr13 111679115 111679142 -8605170 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1437 22 0 0 0 chr13 111679318 111679340 -8604972 + AT_rich Low_complexity Low_complexity 1 22 0 2 1437 1214 54 0 0 chr13 111679340 111679487 -8604825 - B1_Mm SINE Alu 0 147 1 2 1437 24 32 0 0 chr13 111679498 111679529 -8604783 + AT_rich Low_complexity Low_complexity 1 31 0 2 1437 476 249 240 11 chr13 111679770 111679945 -8604367 - B3 SINE B2 0 216 2 2 1437 1049 360 38 23 chr13 111681928 111682591 -8601721 + HERV16-int LTR ERVL 372 1044 -3952 2 1437 537 358 111 40 chr13 111683298 111683676 -8600636 + LTR16A LTR ERVL 1 405 -46 2 1437 198 91 0 0 chr13 111685901 111685934 -8598378 + (A)n Simple_repeat Simple_repeat 1 33 0 2 1437 31 58 0 0 chr13 111686675 111686727 -8597585 + AT_rich Low_complexity Low_complexity 1 52 0 2 1437 486 0 0 0 chr13 111687049 111687103 -8597209 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1437 281 289 213 47 chr13 111687397 111687524 -8596788 - RSINE1 SINE B4 -17 148 1 2 1437 249 202 70 10 chr13 111687626 111687726 -8596586 - Lx9 LINE L1 -5 7639 7534 2 1437 396 0 0 0 chr13 111687740 111687784 -8596528 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1437 276 30 0 0 chr13 111688656 111688689 -8595623 + (CATA)n Simple_repeat Simple_repeat 2 34 0 2 1437 546 16 0 0 chr13 111689084 111689147 -8595165 + (CA)n Simple_repeat Simple_repeat 2 64 0 2 1437 347 283 80 0 chr13 111689569 111689682 -8594630 - MIRc SINE MIR -39 229 108 2 1437 230 176 0 56 chr13 111689916 111689970 -8594342 + B3 SINE B2 155 205 -11 2 1437 296 316 107 44 chr13 111691604 111691809 -8592503 + LTR16A LTR ERVL 219 436 -15 2 1437 24 32 0 0 chr13 111691857 111691888 -8592424 + AT_rich Low_complexity Low_complexity 1 31 0 2 1437 487 212 5 32 chr13 111692104 111692289 -8592023 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 2 1437 249 337 0 59 chr13 111693027 111693112 -8591200 - ID2 SINE ID -2 81 2 2 1437 863 346 73 24 chr13 111693461 111693870 -8590442 + LTR33A_ LTR ERVL 103 531 0 2 1437 753 191 164 5 chr13 111694657 111694852 -8589460 + URR1A DNA MER1_type 1 226 0 2 1437 265 210 16 16 chr13 111695698 111695761 -8588551 - L1_Rod LINE L1 -462 5385 5323 2 1437 471 283 99 57 chr13 111695770 111696032 -8588280 + L1MA4 LINE L1 5458 5730 -150 2 1437 304 211 0 0 chr13 111696036 111696112 -8588200 + Lx9 LINE L1 7546 7621 -23 2 1437 353 273 27 14 chr13 111696161 111696336 -8587976 + L1MA4 LINE L1 5773 5924 -376 2 1437 273 57 0 0 chr13 111696863 111696898 -8587414 + (TG)n Simple_repeat Simple_repeat 1 35 0 2 1437 327 25 0 0 chr13 111696898 111696938 -8587374 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1437 386 309 43 0 chr13 111697118 111697280 -8587032 - L1MA8 LINE L1 -75 6216 6048 2 1437 552 224 28 0 chr13 111697354 111697461 -8586851 + PB1D10 SINE Alu 3 112 -5 2 1437 209 331 36 58 chr13 111698594 111698732 -8585580 - MIR SINE MIR -22 240 106 2 1437 6047 118 11 22 chr13 111698885 111699853 -8584459 - RMER17B LTR ERVK 0 958 1 2 1437 1236 81 0 6 chr13 111701110 111701285 -8583027 + L1Md_F2 LINE L1 6398 6571 -11 2 1437 189 0 0 0 chr13 111701680 111701701 -8582611 + (CA)n Simple_repeat Simple_repeat 2 22 0 2 1437 426 233 112 70 chr13 111701717 111701860 -8582452 + B1_Mur2 SINE Alu 1 149 0 3 1437 349 328 56 51 chr13 111701885 111702100 -8582212 + HAL1 LINE L1 2251 2466 -41 3 1437 1419 80 16 0 chr13 111702591 111702778 -8581534 - B2_Mm2 SINE B2 -5 190 1 3 1437 2736 78 18 13 chr13 111703043 111703430 -8580882 - L1_Mus3 LINE L1 -1 6637 6249 3 1437 506 304 0 9 chr13 111704404 111704520 -8579792 - RSINE1 SINE B4 -48 117 3 3 1437 507 261 27 0 chr13 111704992 111705103 -8579209 - PB1D10 SINE Alu 0 117 4 3 1437 327 359 38 0 chr13 111705673 111705804 -8578508 + MLT1D LTR MaLR 252 387 -118 3 1437 342 0 0 0 chr13 111705979 111706017 -8578295 + (CATA)n Simple_repeat Simple_repeat 4 41 0 3 1437 26 0 0 0 chr13 111706425 111706451 -8577861 + AT_rich Low_complexity Low_complexity 1 26 0 3 1437 189 327 85 52 chr13 111707164 111707374 -8576938 + MIRb SINE MIR 38 247 -21 3 1437 441 234 0 0 chr13 111707461 111707538 -8576774 + 5S rRNA rRNA 1 77 -44 3 1437 271 262 47 12 chr13 111709315 111709400 -8574912 - Charlie18a DNA MER1_type -131 211 124 3 1437 567 0 0 0 chr13 111709469 111709532 -8574780 + (TC)n Simple_repeat Simple_repeat 1 63 0 3 1437 252 0 0 0 chr13 111709532 111709559 -8574753 + (CA)n Simple_repeat Simple_repeat 1 28 0 3 1437 4738 72 0 0 chr13 111710208 111710818 -8573494 - L1Md_T LINE L1 0 6582 5973 3 1437 215 232 0 0 chr13 111712251 111712307 -8572005 + T-rich Low_complexity Low_complexity 4 59 0 3 1437 477 0 0 0 chr13 111712573 111712626 -8571686 + (GA)n Simple_repeat Simple_repeat 2 54 0 3 1437 623 210 136 6 chr13 111713028 111713205 -8571107 - ORR1D2 LTR MaLR 0 370 171 3 1437 606 269 141 11 chr13 111713358 111713542 -8570770 - ORR1D2 LTR MaLR -162 208 1 3 1437 218 178 28 3 chr13 111715919 111715976 -8568336 + MIRc SINE MIR 177 235 -33 3 1437 217 353 29 40 chr13 111716166 111716340 -8567972 + L3 LINE CR1 3967 4138 -351 3 1437 280 298 20 39 chr13 111716456 111716568 -8567744 + ID_B1 SINE B4 77 186 -38 3 1437 391 271 10 20 chr13 111716475 111716573 -8567739 + PB1D10 SINE Alu 8 104 -13 3 1437 223 338 6 0 chr13 111716590 111716669 -8567643 + ID4 SINE ID 2 81 -2 3 1437 189 0 0 0 chr13 111716676 111716697 -8567615 + (TATAA)n Simple_repeat Simple_repeat 2 22 0 3 1437 465 281 116 27 chr13 111716808 111717145 -8567167 + L1M4 LINE L1 2341 2707 -3439 3 1437 263 323 91 52 chr13 111717201 111717606 -8566706 + L1M4 LINE L1 4589 5009 -1137 3 1437 191 81 54 0 chr13 111718169 111718206 -8566106 + (CAGAGA)n Simple_repeat Simple_repeat 6 44 0 3 1437 333 213 22 33 chr13 111718257 111718437 -8565875 + (CAGAGA)n Simple_repeat Simple_repeat 3 180 0 3 1437 219 103 0 0 chr13 111718443 111718482 -8565830 + (A)n Simple_repeat Simple_repeat 1 39 0 3 1437 1058 125 0 0 chr13 111720963 111721107 -8563205 + B1_Mur4 SINE Alu 1 144 -6 3 1437 33 56 0 0 chr13 111721419 111721473 -8562839 + AT_rich Low_complexity Low_complexity 1 54 0 3 1437 674 105 9 0 chr13 111721689 111721803 -8562509 + (TG)n Simple_repeat Simple_repeat 1 115 0 3 1437 599 272 20 45 chr13 111723100 111723300 -8561012 + B3A SINE B2 2 196 -2 3 1437 1582 136 50 18 chr13 111723631 111723909 -8560403 - Lx LINE L1 -7 6647 6361 3 1437 263 338 0 14 chr13 111723943 111724012 -8560300 + B4 SINE B4 220 287 -5 3 1437 27 49 0 0 chr13 111724063 111724104 -8560208 + AT_rich Low_complexity Low_complexity 1 41 0 3 1437 522 0 0 0 chr13 111724141 111724199 -8560113 + (TG)n Simple_repeat Simple_repeat 1 58 0 3 1437 239 267 91 86 chr13 111724420 111724641 -8559671 + RLTR15 LTR ERVK 71 292 -67 3 1437 641 343 121 58 chr13 111724800 111725152 -8559160 - Zaphod DNA Tip100 -3014 1017 648 3 1437 823 181 7 13 chr13 111725152 111725303 -8559009 + B1_Mur4 SINE Alu 1 150 0 3 1437 641 343 121 58 chr13 111725303 111725906 -8558406 - Zaphod DNA Tip100 -3384 647 1 3 1437 4767 127 15 7 chr13 111725984 111726719 -8557593 + Lx4A LINE L1 6318 7058 0 3 1437 2128 83 10 0 chr13 111726732 111727033 -8557279 - L1_Mus3 LINE L1 -429 6209 5906 3 1437 3222 68 5 2 chr13 111727034 111727460 -8556852 + L1_Mus3 LINE L1 6205 6631 -7 3 1437 3341 73 2 5 chr13 111727935 111728374 -8555938 - L1_Mus2 LINE L1 0 6566 6129 3 1437 424 262 285 13 chr13 111728381 111728532 -8555780 - B3A SINE B2 -4 194 3 3 1437 183 80 59 20 chr13 111728582 111728633 -8555679 + T-rich Low_complexity Low_complexity 3 55 0 3 1437 1123 112 12 0 chr13 111728914 111729075 -8555237 + B2_Mm2 SINE B2 2 164 -31 3 1437 242 217 200 14 chr13 111729404 111729474 -8554838 + B4A SINE B4 2 84 -208 3 1437 570 258 164 16 chr13 111730380 111730624 -8553688 - Lx8 LINE L1 -276 7197 6918 3 1437 764 178 0 6 chr13 111730973 111731154 -8553158 + CT-rich Low_complexity Low_complexity 1 180 0 3 1437 351 0 0 0 chr13 111731154 111731193 -8553119 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1437 261 298 73 57 chr13 111731634 111731826 -8552486 - L1MA5 LINE L1 -2 6298 6104 3 1437 2184 65 0 61 chr13 111732175 111732488 -8551824 + L1_Mus2 LINE L1 6273 6566 0 3 1437 1123 63 0 0 chr13 111732794 111732936 -8551376 + B1_Mus2 SINE Alu 6 147 0 3 1437 22 70 0 0 chr13 111735722 111735765 -8548547 + AT_rich Low_complexity Low_complexity 1 43 0 3 1437 270 0 0 0 chr13 111736610 111736640 -8547672 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3 1437 1148 56 7 0 chr13 111736640 111736783 -8547529 - B1_Mm SINE Alu -2 145 2 3 1437 1068 90 0 0 chr13 111738081 111738226 -8546086 + B1_Mus1 SINE Alu 1 145 -3 3 1437 588 311 20 40 chr13 111739566 111739764 -8544548 + B4A SINE B4 27 220 -72 3 1437 426 248 37 0 chr13 111740031 111740140 -8544172 + MTD LTR MaLR 16 128 -291 3 1437 468 0 0 0 chr13 111740140 111740192 -8544120 + (CA)n Simple_repeat Simple_repeat 1 52 0 3 1437 608 193 160 10 chr13 111740527 111740721 -8543591 - Lx7 LINE L1 -8 7688 7466 3 1437 6626 194 45 30 chr13 111740729 111742347 -8541965 - Lx7 LINE L1 -1382 6314 4624 3 1437 363 105 0 0 chr13 111742347 111742404 -8541908 + (TG)n Simple_repeat Simple_repeat 2 58 0 3 1437 6626 161 34 32 chr13 111742404 111743040 -8541272 - Lx7 LINE L1 -1256 4624 3985 3 1437 3916 180 18 20 chr13 111743043 111743751 -8540561 - Lx7 LINE L1 -3115 2765 2053 3 1437 336 64 0 0 chr13 111743751 111743798 -8540514 + (TGG)n Simple_repeat Simple_repeat 3 49 0 3 1437 3916 180 18 20 chr13 111743798 111743930 -8540382 - Lx7 LINE L1 -3828 2052 1927 3 1437 977 313 98 100 chr13 111743934 111744545 -8539767 - RLTR18 LTR ERVK -6 610 1 3 1437 1025 158 0 25 chr13 111744545 111744746 -8539566 - Lx7 LINE L1 -3946 1934 1739 3 1437 852 251 66 8 chr13 111744738 111744979 -8539333 + Lx2B LINE L1 6726 6980 -20 3 1437 1209 90 11 0 chr13 111745165 111745343 -8538969 + L1_Mus3 LINE L1 6452 6631 -7 3 1437 180 0 0 0 chr13 111745343 111745363 -8538949 + (CAA)n Simple_repeat Simple_repeat 2 21 0 3 1437 792 164 40 0 chr13 111745464 111745616 -8538696 - Lx7 LINE L1 -7512 216 59 3 1437 226 258 104 15 chr13 111746159 111746226 -8538086 - ID4_ SINE ID -3 80 8 3 1437 661 184 18 0 chr13 111747058 111747172 -8537140 + ORR1D1 LTR MaLR 1 116 -258 3 1437 265 387 36 7 chr13 111747216 111747354 -8536958 - L2 LINE L2 -410 3009 2868 3 1437 508 302 36 69 chr13 111747406 111747685 -8536627 + B4 SINE B4 41 281 -11 3 1437 872 195 150 4 chr13 111748014 111748241 -8536071 + Lx9 LINE L1 6613 6872 -772 3 1437 3106 140 64 107 chr13 111748369 111748955 -8535357 + RMER6C LTR ERVK 1 620 -70 3 1437 1248 41 0 0 chr13 111748955 111749102 -8535210 + B1_Mus2 SINE Alu 1 147 0 3 1437 3106 140 64 107 chr13 111749102 111749236 -8535076 + RMER6C LTR ERVK 621 690 0 3 1437 404 223 25 41 chr13 111749484 111749617 -8534695 + MLT1A LTR MaLR 260 408 0 3 1437 313 285 204 13 chr13 111749665 111749896 -8534416 + L1MD LINE L1 2337 2611 -3535 3 1437 1284 75 4 0 chr13 111749967 111750249 -8534063 + (CA)n Simple_repeat Simple_repeat 1 283 0 3 1437 366 329 17 21 chr13 111750264 111750497 -8533815 + L1MD LINE L1 2708 2939 -3207 3 1437 449 168 9 0 chr13 111750750 111750857 -8533455 + (TG)n Simple_repeat Simple_repeat 2 109 0 3 1437 1633 214 35 45 chr13 111750985 111751410 -8532902 + MTC LTR MaLR 1 421 0 3 1437 1447 259 79 8 chr13 111751668 111751825 -8532487 - MTD LTR MaLR -14 405 223 3 1437 1428 89 14 9 chr13 111751825 111752041 -8532271 - L1Md_F2 LINE L1 0 6582 6366 3 1437 1447 259 79 8 chr13 111752041 111752261 -8532051 - MTD LTR MaLR -197 222 1 3 1437 459 0 0 0 chr13 111752354 111752405 -8531907 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 3 1437 210 37 0 0 chr13 111752643 111752670 -8531642 + (TG)n Simple_repeat Simple_repeat 2 28 0 3 1437 453 219 0 63 chr13 111752670 111752797 -8531515 - Lx9 LINE L1 -158 7486 7368 3 1437 251 281 15 15 chr13 111754269 111754334 -8529978 + ID_B1 SINE B4 84 148 -76 3 1437 465 228 7 23 chr13 111754354 111754477 -8529835 + ORR1D1 LTR MaLR 228 350 -34 3 1437 967 125 12 0 chr13 111754809 111754977 -8529335 + (TCC)n Simple_repeat Simple_repeat 3 172 0 3 1437 871 262 60 8 chr13 111755031 111755296 -8529016 - B4A SINE B4 -13 279 1 3 1437 406 356 5 30 chr13 111755416 111755613 -8528699 + MER121 Unknown Unknown 47 238 -174 3 1437 210 98 24 24 chr13 111755613 111755655 -8528657 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 3 1437 330 26 0 0 chr13 111755688 111755727 -8528585 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1437 219 69 0 0 chr13 111755727 111755756 -8528556 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 3 1437 2103 155 61 3 chr13 111755890 111756253 -8528059 - ORR1B1 LTR MaLR -10 384 1 3 1437 368 306 49 11 chr13 111756385 111756552 -8527760 + MIRb SINE MIR 22 194 -74 3 1437 198 191 0 0 chr13 111756801 111756843 -8527469 + (CA)n Simple_repeat Simple_repeat 1 42 0 3 1437 512 316 0 7 chr13 111758106 111758246 -8526066 + ID_B1 SINE B4 82 220 -4 3 1437 1932 152 66 0 chr13 111759229 111759564 -8524748 + ORR1B2 LTR MaLR 1 357 -10 3 1437 479 274 8 49 chr13 111760708 111760831 -8523481 + ID_B1 SINE B4 78 195 -29 3 1437 367 195 167 13 chr13 111760831 111760909 -8523403 + ID_B1 SINE B4 133 222 -2 3 1437 287 185 32 11 chr13 111761994 111762087 -8522225 + GA-rich Low_complexity Low_complexity 3 97 0 3 1437 21 0 0 0 chr13 111763330 111763351 -8520961 + AT_rich Low_complexity Low_complexity 1 21 0 3 1437 584 341 103 6 chr13 111763759 111764053 -8520259 - MLT2B1 LTR ERVL -4 563 236 3 1437 414 0 0 0 chr13 111764053 111764099 -8520213 + (GA)n Simple_repeat Simple_repeat 1 46 0 4 1437 270 293 122 0 chr13 111764557 111764680 -8519632 - Kanga1b DNA Tc2 -252 527 390 4 1437 259 196 0 19 chr13 111765256 111765308 -8519004 - MLT1L LTR MaLR -531 79 29 4 1437 405 0 0 0 chr13 111765987 111766032 -8518280 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1437 212 216 41 0 chr13 111766898 111766995 -8517317 + (TA)n Simple_repeat Simple_repeat 1 101 0 4 1437 605 296 86 25 chr13 111767164 111767559 -8516753 + L1MC3 LINE L1 7312 7730 -55 4 1437 241 284 26 35 chr13 111768619 111768732 -8515580 + Charlie2b DNA MER1_type 106 217 -2565 4 1437 207 0 0 0 chr13 111768967 111768990 -8515322 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 4 1437 201 195 0 0 chr13 111769158 111769199 -8515113 + GA-rich Low_complexity Low_complexity 2 42 0 4 1437 340 250 9 44 chr13 111769201 111769314 -8514998 + G-rich Low_complexity Low_complexity 2 110 0 4 1437 633 125 16 8 chr13 111769320 111769441 -8514871 + (GA)n Simple_repeat Simple_repeat 1 122 0 4 1437 298 282 47 35 chr13 111769585 111769754 -8514558 + L1M5 LINE L1 5042 5212 -934 4 1437 389 308 82 54 chr13 111770021 111770412 -8513900 - L1MA4A LINE L1 -372 5931 5530 4 1437 477 263 159 55 chr13 111770434 111770579 -8513733 - B3 SINE B2 -24 192 33 4 1437 1041 214 65 99 chr13 111770830 111771228 -8513084 + RLTR11A LTR ERVK 4 457 -71 4 1437 594 41 0 0 chr13 111771228 111771301 -8513011 + (TG)n Simple_repeat Simple_repeat 2 74 0 4 1437 1041 230 77 108 chr13 111771301 111771343 -8512969 + RLTR11A LTR ERVK 458 498 -30 4 1437 22 0 0 0 chr13 111771352 111771374 -8512938 + AT_rich Low_complexity Low_complexity 1 22 0 4 1437 275 321 105 25 chr13 111771417 111771740 -8512572 + L1M5 LINE L1 5423 5771 -402 4 1437 227 324 58 10 chr13 111772106 111772209 -8512103 + Charlie2b DNA MER1_type 1796 1903 -879 4 1437 259 305 67 0 chr13 111772483 111772588 -8511724 + Charlie2b DNA MER1_type 2529 2640 -142 4 1437 536 311 6 47 chr13 111772636 111772805 -8511507 + RSINE1 SINE B4 4 165 0 4 1437 1159 61 0 26 chr13 111772833 111772984 -8511328 + B1_Mus2 SINE Alu 1 147 0 4 1437 442 83 14 14 chr13 111772984 111773057 -8511255 + (TAAA)n Simple_repeat Simple_repeat 4 76 0 4 1437 1429 17 0 22 chr13 111773076 111773258 -8511054 + (GGAAA)n Simple_repeat Simple_repeat 3 180 0 4 1437 582 263 5 102 chr13 111773298 111773372 -8510940 - Lx9 LINE L1 -369 7275 7214 4 1437 2008 164 104 3 chr13 111773372 111773727 -8510585 + ORR1B1 LTR MaLR 4 394 0 4 1437 582 263 5 102 chr13 111773727 111773868 -8510444 - Lx9 LINE L1 -431 7213 7081 4 1437 1818 151 6 61 chr13 111774264 111774609 -8509703 - ORR1A3 LTR MaLR 0 326 1 4 1437 227 276 26 26 chr13 111774687 111774765 -8509547 + MLT1A0 LTR MaLR 3 80 -285 4 1437 1214 337 53 8 chr13 111775361 111775834 -8508478 + MLT1D LTR MaLR 1 494 -11 4 1437 593 299 34 57 chr13 111776046 111776291 -8508021 - ID_B1 SINE B4 -46 246 8 4 1437 200 380 37 0 chr13 111777083 111777191 -8507121 + MIRc SINE MIR 42 153 -115 4 1437 413 272 182 28 chr13 111777294 111777547 -8506765 + B4A SINE B4 1 292 0 4 1437 233 235 59 0 chr13 111777834 111777902 -8506410 - L1M5 LINE L1 -456 5706 5635 4 1437 568 282 38 0 chr13 111777999 111778130 -8506182 + RSINE1 SINE B4 10 145 -20 4 1437 308 313 145 50 chr13 111778164 111778584 -8505728 - L2 LINE L2 -640 2779 2320 4 1437 470 294 215 54 chr13 111778956 111779385 -8504927 - MLT1D LTR MaLR -5 500 3 4 1437 3142 149 40 2 chr13 111779774 111780292 -8504020 + Lx4A LINE L1 6511 7048 -10 4 1437 432 0 0 0 chr13 111780310 111780358 -8503954 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 4 1437 570 54 0 0 chr13 111780381 111780455 -8503857 + (GGGA)n Simple_repeat Simple_repeat 1 74 0 4 1437 184 364 11 54 chr13 111780674 111780767 -8503545 + L2c LINE L2 3270 3358 -29 4 1437 876 311 101 6 chr13 111781462 111781789 -8502523 + MER70A LTR ERVL 113 470 -2 4 1437 266 364 77 43 chr13 111781901 111782108 -8502204 + MIR SINE MIR 21 234 -28 4 1437 367 275 104 30 chr13 111783001 111783171 -8501141 + MLT1D LTR MaLR 1 182 -445 4 1437 218 91 68 0 chr13 111783195 111783239 -8501073 + (GTTTG)n Simple_repeat Simple_repeat 3 49 0 4 1437 180 0 0 0 chr13 111783240 111783260 -8501052 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1437 867 300 47 15 chr13 111783296 111783570 -8500742 + MLT1D LTR MaLR 223 505 0 4 1437 650 271 120 16 chr13 111783570 111783758 -8500554 + B4A SINE B4 2 209 -83 4 1437 259 162 221 0 chr13 111783758 111783826 -8500486 + ORR1D1 LTR MaLR 1 83 -291 4 1437 694 85 28 14 chr13 111783826 111783969 -8500343 + (TAGA)n Simple_repeat Simple_repeat 3 147 0 4 1437 279 0 0 0 chr13 111784082 111784113 -8500199 + (CA)n Simple_repeat Simple_repeat 1 31 0 4 1437 320 320 109 10 chr13 111784187 111784389 -8499923 - L2a LINE L2 -247 3179 2958 4 1437 723 54 0 0 chr13 111784544 111784636 -8499676 + (GAA)n Simple_repeat Simple_repeat 2 93 0 4 1437 237 330 30 0 chr13 111784700 111784800 -8499512 - L1MD LINE L1 -1171 4975 4873 4 1437 180 397 14 0 chr13 111784905 111784978 -8499334 + L2b LINE L2 3283 3356 -19 4 1437 185 244 0 0 chr13 111785328 111785369 -8498943 + MIR SINE MIR 69 109 -153 4 1437 676 262 15 35 chr13 111785387 111785589 -8498723 - B3A SINE B2 0 198 1 4 1437 1036 191 4 26 chr13 111786193 111786419 -8497893 - URR1B DNA MER1_type 0 225 5 4 1437 24 32 0 0 chr13 111787052 111787083 -8497229 + AT_rich Low_complexity Low_complexity 1 31 0 4 1437 267 224 0 0 chr13 111787288 111787337 -8496975 + Lx8 LINE L1 6449 6497 -976 4 1437 290 342 45 9 chr13 111787399 111787511 -8496801 + ID_B1 SINE B4 88 203 -21 4 1437 839 83 0 8 chr13 111787877 111787999 -8496313 + (GAAA)n Simple_repeat Simple_repeat 3 123 0 4 1437 191 355 8 76 chr13 111788623 111788754 -8495558 + MIR SINE MIR 1 122 -140 4 1437 22 0 0 0 chr13 111788872 111788894 -8495418 + AT_rich Low_complexity Low_complexity 1 22 0 4 1437 374 365 47 21 chr13 111789666 111789859 -8494453 - MER3 DNA MER1_type -6 203 6 4 1437 221 0 0 33 chr13 111790642 111790672 -8493640 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 4 1437 324 70 0 0 chr13 111790672 111790714 -8493598 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1437 3337 38 2 0 chr13 111790722 111791116 -8493196 - L1_Mus1 LINE L1 -2 6565 6171 4 1437 806 320 19 48 chr13 111791407 111791750 -8492562 - MLT1A0 LTR MaLR 0 408 26 4 1437 378 0 0 0 chr13 111792591 111792633 -8491679 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1437 460 56 14 27 chr13 111792672 111792745 -8491567 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 4 1437 231 256 150 25 chr13 111793006 111793126 -8491186 - MER5A1 DNA MER1_type -19 147 13 4 1437 21 36 0 0 chr13 111793735 111793763 -8490549 + AT_rich Low_complexity Low_complexity 1 28 0 4 1437 201 129 0 0 chr13 111793793 111793824 -8490488 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 4 1437 22643 123 19 15 chr13 111794864 111801326 -8482986 + L1_Mus1 LINE L1 177 6567 0 4 1437 480 270 82 0 chr13 111801397 111801556 -8482756 + MLT1A0 LTR MaLR 192 363 -2 4 1437 309 264 91 11 chr13 111801746 111801834 -8482478 - MER53 DNA hAT -2 191 97 4 1437 259 333 60 60 chr13 111801873 111802007 -8482305 - MLT1I LTR MaLR -234 177 44 4 1437 306 0 0 0 chr13 111802815 111802849 -8481463 + (TTTG)n Simple_repeat Simple_repeat 4 37 0 4 1437 327 281 73 0 chr13 111802849 111802931 -8481381 - PB1D10 SINE Alu -14 103 16 4 1437 3132 65 12 7 chr13 111803793 111804209 -8480103 + L1_Mus1 LINE L1 6150 6567 0 4 1438 2564 57 0 0 chr13 111805038 111805372 -8478940 - L1Md_F2 LINE L1 -491 6091 5758 4 1438 3063 72 73 11 chr13 111805372 111805809 -8478503 + L1Md_F2 LINE L1 6106 6569 -13 4 1438 301 262 49 14 chr13 111805809 111805827 -8478485 - L1MB8 LINE L1 -389 5789 5767 4 1438 313 269 150 23 chr13 111805867 111806000 -8478312 - RSINE1 SINE B4 -14 151 2 4 1438 4231 129 8 2 chr13 111806011 111806642 -8477670 - Lx LINE L1 -6 6648 6014 4 1438 22 0 0 0 chr13 111807479 111807501 -8476811 + AT_rich Low_complexity Low_complexity 1 22 0 4 1438 1987 53 0 4 chr13 111808145 111808409 -8475903 - L1_Mus1 LINE L1 -408 6159 5897 4 1438 540 0 0 0 chr13 111809506 111809566 -8474746 + (TC)n Simple_repeat Simple_repeat 2 61 0 4 1438 709 333 103 16 chr13 111811933 111812244 -8472068 - MER2 DNA MER2_type -2 343 6 4 1438 303 28 0 0 chr13 111812370 111812406 -8471906 + (CA)n Simple_repeat Simple_repeat 1 36 0 4 1438 387 89 0 0 chr13 111812406 111812461 -8471851 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1438 910 149 195 11 chr13 111813130 111813320 -8470992 - URR1B DNA MER1_type 0 225 1 4 1438 1826 255 45 22 chr13 111813813 111814306 -8470006 + RMER20A LTR ERVK 11 514 -2 4 1438 2186 86 3 0 chr13 111815156 111815446 -8468866 - L1_Mus2 LINE L1 0 6566 6276 4 1438 326 209 66 9 chr13 111815496 111815602 -8468710 + Lx9 LINE L1 7367 7478 -166 4 1438 225 0 0 0 chr13 111815602 111815627 -8468685 + (CA)n Simple_repeat Simple_repeat 2 26 0 4 1438 477 80 0 0 chr13 111815627 111815702 -8468610 + (GA)n Simple_repeat Simple_repeat 1 75 0 4 1438 392 162 50 33 chr13 111815702 111815823 -8468489 + Lx9 LINE L1 7520 7642 -2 4 1438 426 39 0 0 chr13 111816092 111816144 -8468168 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 1438 23 33 0 0 chr13 111816263 111816293 -8468019 + AT_rich Low_complexity Low_complexity 1 30 0 4 1438 812 271 43 14 chr13 111816360 111816570 -8467742 - B3A SINE B2 0 216 1 4 1438 235 228 35 0 chr13 111816891 111816948 -8467364 + (TA)n Simple_repeat Simple_repeat 2 60 0 4 1438 243 340 41 22 chr13 111818249 111818517 -8465795 - L1M5 LINE L1 -1527 4619 4347 4 1438 355 342 42 15 chr13 111818663 111818927 -8465385 + L1MC4 LINE L1 5560 5830 -2052 4 1438 1659 157 27 60 chr13 111819090 111819423 -8464889 - ORR1A3 LTR MaLR 0 326 5 4 1438 382 285 142 19 chr13 111819727 111819995 -8464317 + L1MC4 LINE L1 6346 6646 -1396 4 1438 215 258 29 43 chr13 111820000 111820069 -8464243 + GA-rich Low_complexity Low_complexity 3 70 0 4 1438 222 169 15 30 chr13 111820104 111820171 -8464141 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 5 1438 780 83 0 0 chr13 111820172 111820281 -8464031 + (GAAA)n Simple_repeat Simple_repeat 3 111 0 5 1438 444 37 0 0 chr13 111820281 111820334 -8463978 + (GGGA)n Simple_repeat Simple_repeat 4 57 0 5 1438 638 222 133 10 chr13 111822162 111822435 -8461877 + ORR1D2 LTR MaLR 4 370 0 5 1438 1130 40 27 0 chr13 111822982 111823131 -8461181 - L1Md_F3 LINE L1 -1367 4516 4364 5 1438 8059 58 2 2 chr13 111823130 111824206 -8460106 + L1Md_F3 LINE L1 4510 5585 -298 5 1438 8241 34 9 2 chr13 111824207 111825196 -8459116 + L1Md_F3 LINE L1 5587 6582 -2 5 1438 198 91 0 0 chr13 111825374 111825407 -8458905 + (A)n Simple_repeat Simple_repeat 1 33 0 5 1438 1574 126 167 7 chr13 111827822 111828103 -8456209 - ORR1A3 LTR MaLR 0 326 1 5 1438 258 32 0 0 chr13 111828463 111828494 -8455818 + (CATA)n Simple_repeat Simple_repeat 2 32 0 5 1438 22 0 0 0 chr13 111828757 111828779 -8455533 + AT_rich Low_complexity Low_complexity 1 22 0 5 1438 247 299 0 13 chr13 111828880 111828958 -8455354 + Charlie7 DNA MER1_type 1618 1694 -918 5 1438 600 280 44 8 chr13 111829017 111829269 -8455043 + L1MA4 LINE L1 5669 5929 -371 5 1438 379 301 97 97 chr13 111829480 111829884 -8454428 + Charlie7 DNA MER1_type 1748 2151 -461 5 1438 361 261 8 67 chr13 111830755 111830874 -8453438 - PB1D10 SINE Alu -1 116 5 5 1438 360 209 37 37 chr13 111831386 111831550 -8452762 + (TTATA)n Simple_repeat Simple_repeat 4 167 0 5 1438 244 169 101 31 chr13 111831500 111831659 -8452653 + (TATATG)n Simple_repeat Simple_repeat 3 172 0 5 1438 180 0 0 0 chr13 111833271 111833291 -8451021 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5 1438 21 0 0 0 chr13 111833487 111833508 -8450804 + AT_rich Low_complexity Low_complexity 1 21 0 5 1438 189 0 0 0 chr13 111834392 111834413 -8449899 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 1438 3578 91 4 40 chr13 111835379 111835927 -8448385 - Lx LINE L1 -4 6650 6123 5 1438 525 106 0 39 chr13 111835927 111836020 -8448292 + L1_Mus4 LINE L1 6084 6148 -488 5 1438 995 152 115 15 chr13 111836285 111836485 -8447827 - URR1B DNA MER1_type -5 220 1 5 1438 1894 190 9 0 chr13 111836548 111836875 -8447437 + Lx9 LINE L1 7086 7415 -229 5 1438 258 105 0 0 chr13 111836880 111836918 -8447394 + (CA)n Simple_repeat Simple_repeat 2 39 0 5 1438 2402 195 18 10 chr13 111837216 111837728 -8446584 + RMER20A LTR ERVK 1 516 0 5 1438 679 236 12 19 chr13 111838118 111838278 -8446034 + Lx9 LINE L1 6584 6742 -902 5 1438 402 215 28 18 chr13 111838872 111838981 -8445331 + MER5B DNA MER1_type 2 111 -67 5 1438 765 185 208 0 chr13 111839189 111839367 -8444945 - B3 SINE B2 0 216 2 5 1438 349 224 0 0 chr13 111839408 111839475 -8444837 + Lx9 LINE L1 6584 6650 -994 5 1438 452 268 8 0 chr13 111841593 111841716 -8442596 - B1F SINE Alu -6 143 20 5 1438 262 170 43 0 chr13 111842250 111842297 -8442015 - Lx8 LINE L1 -555 6918 6870 5 1438 3908 88 19 7 chr13 111842522 111843062 -8441250 - Lx3C LINE L1 -10 6966 6421 5 1438 243 0 0 0 chr13 111843062 111843089 -8441223 + (TC)n Simple_repeat Simple_repeat 2 28 0 5 1438 959 232 16 0 chr13 111843089 111843279 -8441033 + ORR1B2 LTR MaLR 166 358 -9 5 1438 211 345 56 14 chr13 111843286 111843430 -8440882 + MIR SINE MIR 113 262 0 5 1438 4775 107 61 9 chr13 111844047 111844747 -8439565 - RMER19A LTR ERVK 0 737 1 5 1438 339 25 0 0 chr13 111845043 111845083 -8439229 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1438 362 306 30 10 chr13 111845370 111845539 -8438773 - ID_B1 SINE B4 -21 203 1 5 1438 248 301 68 14 chr13 111846400 111846474 -8437838 + B4A SINE B4 1 78 -214 5 1438 246 258 69 23 chr13 111846474 111846531 -8437781 + BC1_Mm scRNA scRNA 1 137 -15 5 1438 264 309 7 100 chr13 111846540 111846729 -8437583 + B4A SINE B4 106 269 -23 5 1438 1233 101 0 0 chr13 111846729 111846908 -8437404 + (CA)n Simple_repeat Simple_repeat 2 180 0 5 1438 236 339 6 77 chr13 111846908 111846930 -8437382 + B4 SINE B4 270 291 -1 5 1438 807 163 0 0 chr13 111846931 111847078 -8437234 + (CA)n Simple_repeat Simple_repeat 2 148 0 5 1438 355 270 93 13 chr13 111847249 111847399 -8436913 + MLT2C2 LTR ERVL 5 166 -298 5 1438 5710 74 30 7 chr13 111847726 111848498 -8435814 - Lx3_Mus LINE L1 0 7009 6220 5 1438 1089 227 75 143 chr13 111850442 111850925 -8433387 - RMER4B LTR ERVK 0 466 17 5 1438 548 303 16 38 chr13 111851062 111851247 -8433065 - B3A SINE B2 -3 195 15 5 1438 294 247 206 0 chr13 111852318 111852415 -8431897 + PB1D10 SINE Alu 1 117 0 5 1438 38772 34 0 0 chr13 111852461 111857944 -8426368 - L1Md_T LINE L1 0 6585 1007 5 1438 2833 16 5 129 chr13 111857944 111858363 -8425949 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1438 1044 119 74 0 chr13 111858363 111858539 -8425773 + IAPEz-int LTR ERVK 8 196 -6285 5 1438 7761 75 107 12 chr13 111858510 111859699 -8424613 + IAPEz-int LTR ERVK 67 1313 -5168 5 1438 29320 23 1 1 chr13 111859698 111862969 -8421343 + IAPEz-int LTR ERVK 3210 6481 0 5 1438 2851 14 5 129 chr13 111862969 111863388 -8420924 + IAPLTR1_Mm LTR ERVK 1 367 0 5 1438 9090 19 2 0 chr13 111863388 111864755 -8419557 - L1Md_Gf LINE L1 -5510 1012 1 5 1438 2870 121 16 20 chr13 111865807 111865915 -8418397 - Lx4A LINE L1 0 7058 6953 5 1438 204 40 0 0 chr13 111865915 111865940 -8418372 + (C)n Simple_repeat Simple_repeat 1 25 0 5 1438 2870 121 16 20 chr13 111865940 111866279 -8418033 - Lx4A LINE L1 -106 6952 6613 5 1438 280 281 52 52 chr13 111866390 111866563 -8417749 - LTR16B2 LTR ERVL -3 460 288 5 1438 348 287 11 11 chr13 111866933 111867028 -8417284 - LTR16B2 LTR ERVL -367 95 1 5 1438 4587 28 2 0 chr13 111867296 111867824 -8416488 + L1Md_A LINE L1 6054 6582 0 5 1438 338 227 201 25 chr13 111869977 111870176 -8414136 + L1MC LINE L1 3728 3961 -2185 5 1438 1350 297 121 7 chr13 111870175 111870735 -8413577 + Lx8 LINE L1 6846 7469 -4 5 1438 279 0 0 0 chr13 111871256 111871287 -8413025 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1438 485 315 77 0 chr13 111871290 111871512 -8412800 - L1MA6 LINE L1 -111 6189 5951 5 1438 22 0 0 0 chr13 111871593 111871615 -8412697 + AT_rich Low_complexity Low_complexity 1 22 0 5 1438 1068 96 0 33 chr13 111872023 111872207 -8412105 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 5 1438 2275 36 3 38 chr13 111872209 111872500 -8411812 - L1Md_F3 LINE L1 -2 6582 6302 5 1438 3086 167 15 126 chr13 111872941 111873124 -8411188 - L1_Mur2 LINE L1 -1107 4770 4595 5 1438 927 127 52 0 chr13 111873124 111873258 -8411054 + B1_Mus1 SINE Alu 3 143 -5 5 1438 3086 167 15 126 chr13 111873258 111873828 -8410484 - L1_Mur2 LINE L1 -1283 4594 4101 5 1438 5183 154 15 7 chr13 111873828 111874693 -8409619 + Lx5 LINE L1 5596 6467 -583 5 1438 1179 101 6 0 chr13 111874694 111874863 -8409449 + B2_Mm1t SINE B2 2 171 -22 5 1438 268 164 0 35 chr13 111874934 111874991 -8409321 + B2_Mm2 SINE B2 47 101 -94 5 1438 23 68 0 0 chr13 111875005 111875049 -8409263 + AT_rich Low_complexity Low_complexity 1 44 0 5 1438 2815 226 34 19 chr13 111875049 111875635 -8408677 + Lx5 LINE L1 6455 7049 -1 5 1438 1300 116 5 0 chr13 111875666 111875856 -8408456 + B2_Mm1a SINE B2 1 191 -2 5 1438 237 341 99 28 chr13 111876051 111876232 -8408080 + LTR16A LTR ERVL 166 359 -92 5 1438 283 232 0 0 chr13 111878138 111878194 -8406118 - MIR SINE MIR -3 259 204 5 1438 285 242 0 0 chr13 111879061 111879123 -8405189 + LTR33 LTR ERVL 454 515 0 5 1438 25 31 0 0 chr13 111879249 111879281 -8405031 + AT_rich Low_complexity Low_complexity 1 32 0 5 1438 270 337 73 25 chr13 111879628 111879832 -8404480 + MLT1A LTR MaLR 1 214 -160 5 1438 8333 155 9 4 chr13 111879836 111881223 -8403089 - Lx LINE L1 -254 5629 4236 5 1438 6472 109 65 12 chr13 111881223 111882203 -8402109 + Lx LINE L1 5622 6653 -1 5 1438 273 316 101 38 chr13 111882269 111882427 -8401885 + MIRb SINE MIR 82 249 -19 5 1438 429 20 0 0 chr13 111883746 111883796 -8400516 + (TTTTC)n Simple_repeat Simple_repeat 5 54 0 5 1438 3741 54 87 0 chr13 111883806 111884302 -8400010 - L1_Mus2 LINE L1 0 6566 6028 5 1438 1013 143 85 6 chr13 111884420 111884580 -8399732 + B2_Mm2 SINE B2 3 177 -18 5 1438 225 0 0 0 chr13 111884580 111884605 -8399707 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 5 1438 1013 143 85 6 chr13 111884605 111884620 -8399692 + B2_Mm2 SINE B2 178 192 -3 5 1438 4376 36 0 0 chr13 111884947 111885453 -8398859 + L1Md_T LINE L1 6077 6582 0 5 1438 201 108 0 0 chr13 111885502 111885539 -8398773 + (A)n Simple_repeat Simple_repeat 1 37 0 5 1438 212 250 0 19 chr13 111885906 111885959 -8398353 + CT-rich Low_complexity Low_complexity 2 53 0 5 1438 769 319 126 23 chr13 111886684 111887168 -8397144 + Lx8 LINE L1 6934 7467 -6 5 1438 188 67 33 0 chr13 111889324 111889354 -8394958 + (GAA)n Simple_repeat Simple_repeat 1 31 0 5 1438 501 336 7 7 chr13 111890410 111890548 -8393764 + B4A SINE B4 5 142 -150 5 1438 730 88 0 38 chr13 111890580 111890686 -8393626 + B1_Mm SINE Alu 3 104 -43 5 1438 384 152 0 0 chr13 111890688 111890754 -8393558 + GA-rich Low_complexity Low_complexity 4 69 0 5 1438 1561 194 32 49 chr13 111890754 111891123 -8393189 + ORR1C1 LTR MaLR 16 378 0 5 1438 346 351 62 49 chr13 111891123 111891275 -8393037 + B4A SINE B4 139 292 0 5 1438 6443 71 0 1 chr13 111891545 111892375 -8391937 + L1Md_F2 LINE L1 5741 6569 -13 5 1438 200 128 26 0 chr13 111893667 111893706 -8390606 + A-rich Low_complexity Low_complexity 3 42 0 5 1438 420 275 96 46 chr13 111894916 111895156 -8389156 - Tigger15a DNA TcMar -122 593 342 5 1438 533 120 11 0 chr13 111896891 111896983 -8387329 + Lx LINE L1 6547 6639 -15 5 1438 618 26 0 0 chr13 111896983 111897059 -8387253 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 5 1438 794 106 0 8 chr13 111897091 111897215 -8387097 + (GAGAA)n Simple_repeat Simple_repeat 3 125 0 5 1438 3019 267 66 23 chr13 111897220 111898117 -8386195 + Lx8 LINE L1 6191 7125 -348 5 1438 241 267 0 0 chr13 111898206 111898266 -8386046 + RMER15 LTR ERVL 403 462 -113 5 1438 198 71 0 0 chr13 111898267 111898295 -8386017 + (CA)n Simple_repeat Simple_repeat 2 29 0 5 1438 486 0 0 0 chr13 111898296 111898350 -8385962 + (GA)n Simple_repeat Simple_repeat 1 54 0 5 1438 448 308 37 25 chr13 111899236 111899399 -8384913 - MER20 DNA MER1_type 0 219 55 5 1438 7144 63 37 3 chr13 111899759 111900859 -8383453 + L1_Mus2 LINE L1 5431 6565 -1 5 1438 234 283 53 70 chr13 111901814 111901928 -8382384 + Tigger10 DNA Tigger 988 1099 -744 5 1438 219 69 0 0 chr13 111902014 111902043 -8382269 + (CAA)n Simple_repeat Simple_repeat 2 30 0 5 1438 22 70 0 0 chr13 111903354 111903397 -8380915 + AT_rich Low_complexity Low_complexity 1 43 0 6 1438 234 231 205 0 chr13 111903441 111903519 -8380793 - Cheshire DNA MER1_type -2150 270 177 6 1438 2185 170 92 0 chr13 111904223 111904658 -8379654 - RMER1A Other Other -12 1018 544 6 1438 369 0 0 0 chr13 111905254 111905295 -8379017 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 6 1438 683 328 109 23 chr13 111905450 111905808 -8378504 - MLT1G3 LTR MaLR -6 589 223 6 1438 964 249 90 87 chr13 111906131 111906510 -8377802 + RLTR14 LTR ERV1 1 380 -2 6 1438 4301 131 11 26 chr13 111907305 111908697 -8375615 + L1Md_F2 LINE L1 398 1766 -4117 6 1438 12499 56 1 1 chr13 111908695 111910349 -8373963 + L1Md_F2 LINE L1 3932 5585 -298 6 1438 7720 61 2 2 chr13 111910350 111911334 -8372978 + L1Md_F2 LINE L1 5587 6570 -12 6 1438 1282 49 6 0 chr13 111911338 111911501 -8372811 + MTA_Mm LTR MaLR 179 342 -54 6 1438 181 104 83 0 chr13 111912084 111912132 -8372180 + A-rich Low_complexity Low_complexity 4 55 0 6 1438 23 33 0 0 chr13 111912823 111912853 -8371459 + AT_rich Low_complexity Low_complexity 1 30 0 6 1438 747 216 0 0 chr13 111913588 111913755 -8370557 + CT-rich Low_complexity Low_complexity 4 170 0 6 1438 28 0 0 0 chr13 111914177 111914205 -8370107 + AT_rich Low_complexity Low_complexity 1 28 0 6 1438 2993 31 0 6 chr13 111914217 111914576 -8369736 + L1Md_F2 LINE L1 6224 6580 -2 6 1438 306 0 0 0 chr13 111915258 111915292 -8369020 + (TC)n Simple_repeat Simple_repeat 1 34 0 6 1438 360 0 0 0 chr13 111915292 111915331 -8368981 + (CA)n Simple_repeat Simple_repeat 1 40 0 6 1438 180 0 0 0 chr13 111915474 111915494 -8368818 + (TC)n Simple_repeat Simple_repeat 1 20 0 6 1438 4141 158 19 111 chr13 111915569 111916560 -8367752 + RLTR13D6 LTR ERVK 1 900 -2 6 1438 483 18 0 0 chr13 111917287 111917343 -8366969 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1438 235 316 153 7 chr13 111917350 111917487 -8366825 - B4A SINE B4 -2 290 134 6 1438 1157 292 57 32 chr13 111917523 111918188 -8366124 - L1MCa LINE L1 -864 5457 4776 6 1438 365 284 98 16 chr13 111918293 111918486 -8365826 - L1M2 LINE L1 -826 5317 5109 6 1438 1280 258 172 29 chr13 111918489 111919394 -8364918 - L1MCa LINE L1 -2600 3721 2687 6 1438 2686 54 30 0 chr13 111919483 111919819 -8364493 + ORR1A1 LTR MaLR 1 346 0 6 1438 538 260 89 0 chr13 111920029 111920152 -8364160 - B3A SINE B2 -27 171 38 6 1438 479 366 67 32 chr13 111920334 111920647 -8363665 - L1MCa LINE L1 -6156 352 29 6 1438 23 33 0 0 chr13 111920684 111920714 -8363598 + AT_rich Low_complexity Low_complexity 1 30 0 6 1438 497 281 103 13 chr13 111921198 111921353 -8362959 + ID_B1 SINE B4 1 169 -55 6 1438 313 350 48 0 chr13 111921283 111921386 -8362926 + PB1D10 SINE Alu 10 117 0 6 1438 1019 286 22 4 chr13 111921375 111921645 -8362667 - MLT1A1 LTR MaLR -54 354 80 6 1438 839 195 0 7 chr13 111921660 111921810 -8362502 + B1_Mur4 SINE Alu 1 149 -1 6 1438 194 81 0 26 chr13 111921818 111921856 -8362456 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 6 1438 298 200 71 0 chr13 111921866 111921936 -8362376 - MLT1A1 LTR MaLR -333 75 1 6 1438 1540 161 29 14 chr13 111923600 111923878 -8360434 + Lx4B LINE L1 6770 7051 -7 6 1438 183 107 33 67 chr13 111924384 111924474 -8359838 + CT-rich Low_complexity Low_complexity 3 89 0 6 1438 603 298 13 19 chr13 111925496 111925650 -8358662 + RSINE1 SINE B4 3 155 -10 6 1438 5658 59 26 8 chr13 111925687 111926426 -8357886 + L1Md_F2 LINE L1 5819 6570 -12 6 1438 4180 230 37 17 chr13 111926963 111927966 -8356346 - Lx5 LINE L1 0 7050 6028 6 1438 2845 138 58 0 chr13 111927965 111928607 -8355705 + Lx5 LINE L1 5328 6013 -1037 6 1438 273 318 57 21 chr13 111929146 111929339 -8354973 + L1ME5 LINE L1 5709 5908 -286 6 1438 615 333 43 0 chr13 111929475 111929682 -8354630 - MIR SINE MIR -20 242 27 6 1438 181 301 30 70 chr13 111930059 111930159 -8354153 + L3 LINE CR1 1234 1329 -3160 6 1438 255 366 11 17 chr13 111930264 111930439 -8353873 + GA-rich Low_complexity Low_complexity 1 174 0 6 1438 391 154 59 0 chr13 111930520 111930656 -8353656 + CT-rich Low_complexity Low_complexity 2 145 0 6 1438 358 339 114 74 chr13 111930758 111931029 -8353283 + LTR33A LTR ERVL 7 288 -232 6 1438 620 312 156 37 chr13 111931209 111931586 -8352726 + MLT1D LTR MaLR 1 422 -83 6 1438 1133 141 92 5 chr13 111932101 111932308 -8352004 + URR1B DNA MER1_type 1 225 0 6 1438 342 0 0 0 chr13 111932878 111932916 -8351396 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1438 242 208 19 19 chr13 111933947 111934001 -8350311 + BLACKJACK DNA AcHobo 2884 2937 -7 6 1438 5521 31 9 0 chr13 111934362 111935009 -8349303 - L1Md_T LINE L1 -1 6581 5929 6 1438 320 308 107 33 chr13 111935047 111935168 -8349144 - MamSINE1 SINE tRNA -133 157 28 6 1439 240 330 136 69 chr13 111935548 111935630 -8348682 + MLT2C1 LTR ERVL 1 77 -320 6 1439 2277 161 5 42 chr13 111935630 111936039 -8348273 - ORR1B1 LTR MaLR 0 394 1 6 1439 240 330 136 69 chr13 111936039 111936317 -8347995 + MLT2C1 LTR ERVL 78 385 -12 6 1439 198 392 48 10 chr13 111936468 111936571 -8347741 + MER5A DNA MER1_type 78 184 -5 6 1439 268 226 0 0 chr13 111936702 111936755 -8347557 + MER53 DNA hAT 1 53 -140 6 1439 408 20 0 0 chr13 111937187 111937236 -8347076 + (TTTG)n Simple_repeat Simple_repeat 2 50 0 6 1439 676 174 91 0 chr13 111937238 111937359 -8346953 - B1_Mur4 SINE Alu -10 140 9 6 1439 246 273 30 15 chr13 111938777 111938844 -8345468 + MLT1C LTR MaLR 57 124 -343 6 1439 303 232 58 0 chr13 111938941 111939010 -8345302 + MLT1C LTR MaLR 393 465 -2 6 1439 235 299 41 0 chr13 111939012 111939109 -8345203 + Charlie1a DNA MER1_type 1052 1152 -303 6 1439 229 292 41 16 chr13 111939143 111939265 -8345047 + Charlie1a DNA MER1_type 1140 1264 -191 6 1439 26383 103 13 8 chr13 111939455 111945812 -8338500 + L1_Mus1 LINE L1 178 6567 0 6 1439 201 74 0 0 chr13 111946331 111946358 -8337954 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1439 1569 176 129 6 chr13 111946962 111947304 -8337008 + ORR1C2 LTR MaLR 1 384 0 6 1439 426 225 107 50 chr13 111947370 111947529 -8336783 + MER33 DNA MER1_type 20 187 -137 6 1439 232 322 114 96 chr13 111947784 111948004 -8336308 - MLT1L LTR MaLR -376 234 11 6 1439 295 319 108 54 chr13 111948836 111949002 -8335310 + MLT1D LTR MaLR 1 175 -330 6 1439 322 266 9 50 chr13 111949437 111949578 -8334734 + Lx7 LINE L1 7568 7676 -20 6 1439 180 0 0 0 chr13 111949644 111949664 -8334648 + (GAA)n Simple_repeat Simple_repeat 1 20 0 6 1439 22 0 0 0 chr13 111949769 111949791 -8334521 + AT_rich Low_complexity Low_complexity 1 22 0 6 1439 233 303 94 94 chr13 111949811 111949982 -8334330 - MLT1D LTR MaLR -117 388 218 6 1439 1097 150 171 0 chr13 111950283 111950476 -8333836 - URR1A DNA MER1_type 0 226 1 6 1439 21 0 0 0 chr13 111951704 111951725 -8332587 + AT_rich Low_complexity Low_complexity 1 21 0 6 1439 424 377 59 39 chr13 111951810 111952064 -8332248 + LTR16A LTR ERVL 5 263 -188 6 1439 7075 106 36 16 chr13 111952115 111953162 -8331150 - Lx LINE L1 0 6654 5587 6 1439 370 100 0 0 chr13 111953159 111953209 -8331103 + Lx LINE L1 5546 5595 -288 6 1439 493 295 50 162 chr13 111953693 111954130 -8330182 - RMER10A LTR ERVL -25 417 30 6 1439 1656 205 85 3 chr13 111954361 111954738 -8329574 + Lx9 LINE L1 7222 7629 -15 6 1439 25 0 0 0 chr13 111955019 111955044 -8329268 + AT_rich Low_complexity Low_complexity 1 25 0 6 1439 3248 195 91 46 chr13 111955388 111956169 -8328143 - RLTR40 LTR ERVK -1 816 1 6 1439 339 307 60 16 chr13 111956304 111956496 -8327816 + MIR SINE MIR 44 240 -22 6 1439 609 233 27 32 chr13 111957884 111958070 -8326242 + L1MA8 LINE L1 6100 6284 -7 6 1439 251 324 0 13 chr13 111958433 111958508 -8325804 - PB1D10 SINE Alu -6 111 38 6 1439 294 325 167 19 chr13 111959895 111960105 -8324207 - MIR SINE MIR -10 252 12 6 1439 548 276 24 0 chr13 111961719 111961846 -8322466 + B1F SINE Alu 20 149 0 6 1439 462 199 25 19 chr13 111961863 111962022 -8322290 + G-rich Low_complexity Low_complexity 1 160 0 6 1439 383 346 101 75 chr13 111962023 111962251 -8322061 - MLT1J LTR MaLR -92 420 187 6 1439 234 0 0 0 chr13 111962934 111962960 -8321352 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 6 1439 224 222 27 40 chr13 111963753 111963828 -8320484 - MIRb SINE MIR -122 146 73 6 1439 365 0 22 0 chr13 111963837 111963882 -8320430 + (TC)n Simple_repeat Simple_repeat 1 46 0 6 1439 459 0 0 0 chr13 111963882 111963932 -8320380 + (CA)n Simple_repeat Simple_repeat 1 51 0 6 1439 186 43 0 0 chr13 111964120 111964143 -8320169 + (TA)n Simple_repeat Simple_repeat 2 24 0 6 1439 977 126 0 7 chr13 111964573 111964725 -8319587 - URR1A DNA MER1_type -3 223 73 6 1439 2074 25 4 61 chr13 111965086 111965347 -8318965 + L1Md_T LINE L1 6337 6582 0 6 1439 360 111 0 0 chr13 111965678 111965732 -8318580 + (CCCCCT)n Simple_repeat Simple_repeat 2 55 0 6 1439 294 348 65 29 chr13 111965782 111966166 -8318146 - Charlie25 DNA MER1_type -753 1771 1364 6 1439 277 273 30 0 chr13 111967526 111967592 -8316720 - URR1A DNA MER1_type -140 86 19 6 1439 316 299 52 0 chr13 111968703 111968800 -8315512 - B1F SINE Alu -2 147 46 6 1439 258 323 50 85 chr13 111968826 111969144 -8315168 - HAL1 LINE L1 -1417 1090 784 6 1439 220 352 95 8 chr13 111969435 111969561 -8314751 - L2a LINE L2 -199 3227 3091 6 1439 1416 67 93 0 chr13 111970415 111970608 -8313704 - Lx3_Mus LINE L1 -361 6648 6438 6 1439 2663 102 3 8 chr13 111970625 111970980 -8313332 + Lx3_Mus LINE L1 6657 7009 0 6 1439 405 39 0 0 chr13 111971228 111971279 -8313033 + (GA)n Simple_repeat Simple_repeat 1 51 0 6 1439 52 30 0 0 chr13 111971456 111971522 -8312790 + AT_rich Low_complexity Low_complexity 1 66 0 6 1439 903 286 132 5 chr13 111972467 111972861 -8311451 + L1M4 LINE L1 5275 5718 -456 6 1439 1113 102 0 0 chr13 111973795 111974044 -8310268 + (CA)n Simple_repeat Simple_repeat 1 249 0 6 1439 351 355 88 46 chr13 111975764 111975797 -8308515 + LTR33A_ LTR ERVL 4 44 -476 6 1439 1162 281 87 45 chr13 111975797 111976282 -8308030 + MLT1D LTR MaLR 1 505 0 6 1439 454 349 91 14 chr13 111976282 111976500 -8307812 + LTR33A_ LTR ERVL 45 284 -247 6 1439 508 292 13 39 chr13 111976642 111976795 -8307517 + B1F1 SINE Alu 1 149 0 6 1439 672 48 0 0 chr13 111976840 111976924 -8307388 + (GGGA)n Simple_repeat Simple_repeat 2 85 0 6 1439 1673 164 7 14 chr13 111977556 111977846 -8306466 + RLTR14 LTR ERV1 1 288 -94 7 1439 9009 20 0 0 chr13 111977846 111978866 -8305446 + L1Md_A LINE L1 4567 5586 -297 7 1439 8907 36 0 0 chr13 111978867 111979862 -8304450 + L1Md_A LINE L1 5588 6582 0 7 1439 762 194 0 0 chr13 111979872 111979996 -8304316 + RLTR14 LTR ERV1 259 382 0 7 1439 636 290 97 76 chr13 111979996 111980373 -8303939 - MLT1B LTR MaLR -21 369 4 7 1439 23 0 0 0 chr13 111982570 111982593 -8301719 + AT_rich Low_complexity Low_complexity 1 23 0 7 1439 251 347 58 79 chr13 111982593 111982884 -8301428 - Lx8 LINE L1 0 7473 7189 7 1439 513 0 0 0 chr13 111982925 111982982 -8301330 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1439 534 16 0 0 chr13 111983875 111983938 -8300374 + (TGGA)n Simple_repeat Simple_repeat 4 66 0 7 1439 900 189 0 0 chr13 111985190 111985426 -8298886 + (CA)n Simple_repeat Simple_repeat 1 236 0 7 1439 587 271 129 18 chr13 111985443 111985668 -8298644 - L1MA4 LINE L1 -374 5926 5677 7 1439 430 245 11 0 chr13 111986370 111986464 -8297848 + Lx6 LINE L1 7196 7290 -170 7 1439 957 128 0 16 chr13 111988214 111988397 -8295915 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1439 503 292 7 35 chr13 111988423 111988565 -8295747 - B1F1 SINE Alu -9 140 3 7 1439 367 294 137 22 chr13 111988657 111988970 -8295342 + L1ME2z LINE L1 2611 2959 -3187 7 1439 293 348 49 22 chr13 111989133 111989318 -8294994 + L1ME2z LINE L1 5401 5590 -574 7 1439 398 215 144 88 chr13 111989348 111989542 -8294770 - MLT1A1 LTR MaLR -19 389 185 7 1439 333 295 109 14 chr13 111989678 111989888 -8294424 + L1ME2z LINE L1 5613 5842 -602 7 1439 189 0 0 0 chr13 111990157 111990178 -8294134 + (A)n Simple_repeat Simple_repeat 1 21 0 7 1439 332 311 19 0 chr13 111990181 111990287 -8294025 + L1ME2z LINE L1 6053 6160 -4 7 1439 581 258 25 84 chr13 111990371 111990574 -8293738 + MTE2a LTR MaLR 1 191 -188 7 1439 282 370 43 0 chr13 111990761 111990853 -8293459 - B1F SINE Alu -52 97 2 7 1439 2349 192 42 38 chr13 111990868 111991153 -8293159 - RMER1C Other Other -3 1339 1051 7 1439 2998 27 3 0 chr13 111991153 111991486 -8292826 - L1Md_T LINE L1 -1 6581 6248 7 1439 2349 192 42 38 chr13 111991486 111991748 -8292564 - RMER1C Other Other -292 1050 790 7 1439 370 202 10 101 chr13 111992035 111992134 -8292178 - MTEa LTR MaLR -289 90 1 7 1439 224 311 27 13 chr13 111993672 111993747 -8290565 - MIRc SINE MIR -49 219 144 7 1439 1278 213 0 22 chr13 111993873 111994103 -8290209 - URR1B DNA MER1_type 0 225 1 7 1439 271 257 29 10 chr13 111995271 111995373 -8288939 + MIRb SINE MIR 68 171 -97 7 1439 226 286 0 0 chr13 111996089 111996138 -8288174 + polypurine Low_complexity Low_complexity 1 49 0 7 1439 186 148 36 18 chr13 111996545 111996600 -8287712 + (TA)n Simple_repeat Simple_repeat 2 57 0 7 1439 346 196 41 41 chr13 111996607 111996777 -8287535 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 7 1439 210 161 61 18 chr13 111996811 111996925 -8287387 + (TA)n Simple_repeat Simple_repeat 2 120 0 7 1439 22 56 0 0 chr13 111996962 111996998 -8287314 + AT_rich Low_complexity Low_complexity 1 36 0 7 1439 195 167 45 18 chr13 111997033 111997143 -8287169 + (TTATA)n Simple_repeat Simple_repeat 1 113 0 7 1439 35 41 0 0 chr13 111997198 111997247 -8287065 + AT_rich Low_complexity Low_complexity 1 49 0 7 1439 3669 25 2 0 chr13 111997818 111998213 -8286099 + MTA_Mm LTR MaLR 1 396 0 7 1439 3822 11 7 0 chr13 111998213 111998667 -8285645 + MTA_Mm-int LTR MaLR 1 457 -641 7 1439 1119 27 0 0 chr13 111998659 111998809 -8285503 + MTA_Mm-int LTR MaLR 949 1098 0 7 1439 3201 30 82 0 chr13 111998809 111999175 -8285137 + MTA_Mm LTR MaLR 1 396 0 7 1439 882 162 15 4 chr13 111999495 111999762 -8284550 + GA-rich Low_complexity Low_complexity 1 269 0 7 1439 997 131 17 0 chr13 111999765 111999940 -8284372 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 7 1439 468 35 0 0 chr13 111999941 111999999 -8284313 + (GAAA)n Simple_repeat Simple_repeat 1 58 0 7 1439 261 303 45 0 chr13 112000568 112000657 -8283655 - PB1D7 SINE Alu -26 94 2 1 1439 450 276 9 0 chr13 112000737 112000853 -8283459 + PB1D10 SINE Alu 1 117 0 2 1439 494 284 72 28 chr13 112002162 112002411 -8281901 + MER31A LTR ERV1 97 361 -124 3 1439 1340 84 17 0 chr13 112003144 112003322 -8280990 + B2_Mm2 SINE B2 1 181 -14 4 1439 935 115 0 7 chr13 112003324 112003473 -8280839 + (GAAA)n Simple_repeat Simple_repeat 2 149 0 5 1439 214 279 31 41 chr13 112003629 112003726 -8280586 - MIRb SINE MIR -57 211 116 6 1439 953 111 0 11 chr13 112004166 112004348 -8279964 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1439 925 286 32 11 chr13 112004408 112004691 -8279621 - B4 SINE B4 -2 290 2 8 1439 195 263 18 0 chr13 112004740 112004797 -8279515 + L3 LINE CR1 3450 3507 -982 9 1439 329 281 56 0 chr13 112005053 112005142 -8279170 + BC1_Mm scRNA scRNA 6 99 -53 1 1439 225 233 200 0 chr13 112006961 112007051 -8277261 - Lx7 LINE L1 0 7696 7589 1 1439 333 0 0 0 chr13 112007560 112007597 -8276715 + (CA)n Simple_repeat Simple_repeat 1 37 0 1 1439 238 252 143 19 chr13 112007764 112007869 -8276443 + L1MC2 LINE L1 5316 5433 -2449 1 1439 1014 229 30 20 chr13 112008174 112008472 -8275840 + L1MC LINE L1 4699 4999 -1147 1 1439 393 305 26 19 chr13 112008503 112008657 -8275655 - RSINE1 SINE B4 0 165 11 1 1439 961 257 107 21 chr13 112008657 112009171 -8275141 + L1MC LINE L1 4991 5548 -785 1 1439 1699 256 35 60 chr13 112009455 112010030 -8274282 + L1MC2 LINE L1 5543 6103 -241 1 1439 29239 29 0 0 chr13 112010191 112013618 -8270694 + L1Md_T LINE L1 2161 5586 -297 1 1439 8619 33 0 0 chr13 112013618 112014614 -8269698 + L1Md_T LINE L1 5587 6582 0 1 1439 300 336 9 9 chr13 112014624 112014732 -8269580 + PB1D10 SINE Alu 2 109 -8 1 1439 444 220 91 9 chr13 112014746 112014856 -8269456 + MLT2B4 LTR ERVL 4 122 -434 1 1439 477 0 0 0 chr13 112015047 112015100 -8269212 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1439 313 247 178 79 chr13 112015451 112015770 -8268542 - ORR1E LTR MaLR 0 379 8 2 1439 963 147 0 0 chr13 112016339 112016502 -8267810 + (GAA)n Simple_repeat Simple_repeat 2 164 0 2 1439 342 0 0 0 chr13 112017039 112017077 -8267235 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2 1439 897 129 57 14 chr13 112017094 112017235 -8267077 - B1_Mus1 SINE Alu -1 147 1 2 1439 409 331 74 0 chr13 112017433 112017581 -8266731 - RSINE1 SINE B4 -4 161 3 2 1439 1014 283 17 14 chr13 112018080 112018370 -8265942 + B4A SINE B4 2 292 0 2 1439 183 272 0 0 chr13 112018374 112018455 -8265857 + (CA)n Simple_repeat Simple_repeat 1 81 0 2 1439 493 87 33 0 chr13 112019312 112019404 -8264908 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 2 1439 1010 69 27 14 chr13 112020370 112020663 -8263649 + (TAGA)n Simple_repeat Simple_repeat 1 297 0 2 1439 569 245 1 0 chr13 112020770 112020888 -8263424 - ID_B1 SINE B4 -26 198 84 2 1439 356 325 138 8 chr13 112020955 112021031 -8263281 + L2b LINE L2 2171 2259 -1160 3 1439 546 16 0 0 chr13 112021031 112021094 -8263218 + (TCTA)n Simple_repeat Simple_repeat 1 63 0 3 1439 356 325 138 8 chr13 112021094 112021271 -8263041 + L2b LINE L2 2260 2456 -963 3 1439 279 224 0 0 chr13 112021363 112021439 -8262873 + CT-rich Low_complexity Low_complexity 2 77 0 3 1439 180 206 72 87 chr13 112021556 112021625 -8262687 + L2b LINE L2 3001 3068 -307 3 1439 226 277 135 9 chr13 112024251 112024340 -8259972 + ID_B1 SINE B4 66 161 -63 3 1439 300 256 133 0 chr13 112024280 112024370 -8259942 + PB1D10 SINE Alu 9 110 -7 3 1439 795 244 273 20 chr13 112024430 112024727 -8259585 + ORR1E LTR MaLR 8 379 0 3 1439 216 162 0 0 chr13 112024728 112024765 -8259547 + ID4 SINE ID 37 73 -10 3 1439 392 185 26 53 chr13 112024815 112024929 -8259383 + Tigger16b DNA Tigger 221 331 -6 3 1439 674 258 22 17 chr13 112027535 112027716 -8256596 + B3 SINE B2 1 182 -34 3 1439 396 0 0 0 chr13 112027717 112027761 -8256551 + (GA)n Simple_repeat Simple_repeat 2 45 0 3 1439 1190 49 7 0 chr13 112027910 112028054 -8256258 + B1_Mus1 SINE Alu 4 148 0 4 1439 309 90 45 0 chr13 112028054 112028121 -8256191 + (CAAAA)n Simple_repeat Simple_repeat 1 70 0 4 1439 615 247 44 78 chr13 112028704 112028910 -8255402 + B3 SINE B2 3 201 -15 4 1439 504 0 0 0 chr13 112028915 112028971 -8255341 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1439 213 39 0 0 chr13 112028973 112028999 -8255313 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 1439 208 183 48 24 chr13 112029019 112029103 -8255209 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 4 1439 275 244 8 0 chr13 112029188 112029319 -8254993 + (CA)n Simple_repeat Simple_repeat 1 132 0 4 1439 205 111 67 0 chr13 112029375 112029420 -8254892 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 4 1439 848 201 160 0 chr13 112029794 112029988 -8254324 + URR1A DNA MER1_type 1 225 -1 4 1439 1012 246 85 40 chr13 112030471 112030823 -8253489 + Lx8 LINE L1 6427 6794 -679 4 1439 351 0 0 0 chr13 112031081 112031120 -8253192 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 5 1439 223 177 16 16 chr13 112031395 112031458 -8252854 + CT-rich Low_complexity Low_complexity 6 68 0 5 1439 266 295 141 84 chr13 112031575 112032134 -8252178 - HAL1 LINE L1 -1227 1280 690 5 1439 443 375 26 29 chr13 112032822 112033094 -8251218 + MLT1H LTR MaLR 19 289 -260 5 1439 849 58 0 0 chr13 112033250 112033370 -8250942 + (TC)n Simple_repeat Simple_repeat 1 120 0 5 1439 324 345 72 22 chr13 112033371 112033552 -8250760 - HAL1 LINE L1 -2224 283 94 5 1439 273 324 40 20 chr13 112034856 112035007 -8249305 - MIRb SINE MIR -2 266 113 5 1439 459 0 0 0 chr13 112036651 112036702 -8247610 + (GA)n Simple_repeat Simple_repeat 1 51 0 5 1439 347 146 24 0 chr13 112036709 112036791 -8247521 + (CAGAGA)n Simple_repeat Simple_repeat 1 84 0 5 1439 1249 41 0 0 chr13 112038998 112039145 -8245167 - B1_Mm SINE Alu 0 147 1 5 1439 360 0 0 0 chr13 112041061 112041101 -8243211 + (TG)n Simple_repeat Simple_repeat 2 41 0 5 1439 276 206 8 16 chr13 112041101 112041229 -8243083 + (TA)n Simple_repeat Simple_repeat 1 127 0 6 1439 408 284 8 33 chr13 112041435 112041555 -8242757 - PB1D10 SINE Alu 0 117 1 6 1439 1628 134 74 35 chr13 112042540 112042850 -8241462 - RMER1A Other Other -13 1017 696 6 1439 945 217 0 11 chr13 112042846 112043032 -8241280 - RMER1A Other Other -610 420 237 6 1439 23 0 0 0 chr13 112043350 112043373 -8240939 + AT_rich Low_complexity Low_complexity 1 23 0 6 1439 33 80 0 0 chr13 112043410 112043485 -8240827 + AT_rich Low_complexity Low_complexity 1 75 0 6 1439 3200 79 2 5 chr13 112043485 112043904 -8240408 + L1_Mm LINE L1 5275 5692 -191 6 1439 3791 46 16 40 chr13 112043904 112044406 -8239906 + L1_Mus2 LINE L1 6076 6565 -1 6 1439 24 77 0 0 chr13 112044406 112044458 -8239854 + AT_rich Low_complexity Low_complexity 1 52 0 6 1439 365 283 25 42 chr13 112048591 112048709 -8235603 - MER5A DNA MER1_type 0 189 74 6 1439 192 340 48 39 chr13 112049097 112049201 -8235111 + L2c LINE L2 3111 3215 -172 6 1439 900 74 0 0 chr13 112049629 112049750 -8234562 + (GGAA)n Simple_repeat Simple_repeat 3 123 0 7 1439 269 250 20 50 chr13 112049753 112049854 -8234458 + GA-rich Low_complexity Low_complexity 1 98 0 7 1439 180 135 0 0 chr13 112049926 112049963 -8234349 + (TTTTTG)n Simple_repeat Simple_repeat 4 40 0 7 1439 226 344 57 16 chr13 112050864 112050988 -8233324 - MER58A DNA MER1_type -84 140 12 7 1439 761 246 161 80 chr13 112051034 112051383 -8232929 - MTEa LTR MaLR -2 377 1 7 1439 341 193 47 0 chr13 112051655 112051805 -8232507 + (CA)n Simple_repeat Simple_repeat 1 157 0 7 1439 303 196 45 0 chr13 112051818 112051951 -8232361 + (CA)n Simple_repeat Simple_repeat 2 140 0 7 1439 315 193 77 24 chr13 112052007 112052255 -8232057 + (CA)n Simple_repeat Simple_repeat 1 261 0 7 1439 321 26 0 0 chr13 112052289 112052327 -8231985 + (CA)n Simple_repeat Simple_repeat 2 39 0 7 1439 180 316 0 0 chr13 112054256 112054332 -8229980 + (CCCTAA)n Simple_repeat Simple_repeat 1 76 0 7 1439 1145 50 7 7 chr13 112055114 112055255 -8229057 - B1_Mm SINE Alu -6 141 1 7 1439 252 0 0 0 chr13 112055259 112055287 -8229025 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1439 230 243 112 0 chr13 112055434 112055541 -8228771 - MLT1D LTR MaLR -127 378 260 7 1439 294 125 0 0 chr13 112055790 112055838 -8228474 + (TTG)n Simple_repeat Simple_repeat 3 50 0 8 1439 180 0 0 0 chr13 112057390 112057410 -8226902 + (CA)n Simple_repeat Simple_repeat 2 21 0 8 1439 345 109 0 0 chr13 112058389 112058453 -8225859 + (GTTTG)n Simple_repeat Simple_repeat 1 64 0 8 1439 216 254 0 66 chr13 112058740 112058816 -8225496 + G-rich Low_complexity Low_complexity 5 75 0 8 1439 467 160 11 0 chr13 112059636 112059730 -8224582 + CT-rich Low_complexity Low_complexity 3 97 0 8 1439 216 279 181 7 chr13 112059752 112059903 -8224409 + MIRb SINE MIR 1 178 -90 8 1439 245 333 58 52 chr13 112063666 112063821 -8220491 + MLT1D LTR MaLR 1 156 -471 8 1439 354 98 0 0 chr13 112063904 112063955 -8220357 + (AGGGGG)n Simple_repeat Simple_repeat 2 52 0 8 1439 293 262 218 44 chr13 112063955 112064230 -8220082 + MLT1D LTR MaLR 181 503 -2 8 1439 680 139 22 44 chr13 112064567 112064702 -8219610 - MTC LTR MaLR -281 140 9 8 1439 301 175 88 0 chr13 112064710 112064767 -8219545 - MTE2b LTR MaLR -260 119 58 8 1439 536 190 0 10 chr13 112064765 112064866 -8219446 - MTE2b LTR MaLR -279 100 1 8 1439 3869 156 83 8 chr13 112064993 112065703 -8218609 - Lx4B LINE L1 -43 7015 6253 9 1439 2713 137 68 39 chr13 112065707 112066248 -8218064 - RLTR20B3 LTR ERVK 0 577 21 9 179 3903 119 51 13 chr13 112066260 112066943 -8217369 - Lx4B LINE L1 -812 6246 5534 9 1440 644 363 11 46 chr13 112067003 112067065 -8217247 + MLT1A0 LTR MaLR 7 67 -298 9 1440 355 233 14 0 chr13 112067065 112067138 -8217174 + ID4_ SINE ID 1 74 -9 9 1440 644 363 11 46 chr13 112067138 112067447 -8216865 + MLT1A0 LTR MaLR 68 365 0 9 1440 3101 23 0 0 chr13 112067535 112067881 -8216431 - ORR1A1 LTR MaLR 0 346 1 9 1440 12720 59 29 66 chr13 112067881 112069743 -8214569 - ORR1A1-int LTR MaLR 0 1792 1 9 1440 2590 39 9 0 chr13 112069747 112070082 -8214230 - ORR1A1 LTR MaLR -8 338 1 9 1440 1386 172 80 0 chr13 112071298 112071560 -8212752 - Lx5 LINE L1 -447 6603 6321 9 1440 1891 248 5 40 chr13 112071551 112071975 -8212337 + Lx5 LINE L1 6620 7028 -22 9 1440 37 0 0 0 chr13 112071998 112072035 -8212277 + AT_rich Low_complexity Low_complexity 1 37 0 9 1440 402 21 0 0 chr13 112072049 112072096 -8212216 + (CA)n Simple_repeat Simple_repeat 1 47 0 9 1440 574 220 8 0 chr13 112072939 112073057 -8211255 + ID_B1 SINE B4 104 222 -2 9 1440 183 80 0 0 chr13 112074096 112074121 -8210191 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 1440 439 197 0 0 chr13 112074122 112074193 -8210119 - ID4_ SINE ID -11 72 2 1 1440 346 298 53 0 chr13 112074534 112074665 -8209647 + MER20 DNA MER1_type 81 218 -1 1 1440 951 233 5 0 chr13 112075599 112075792 -8208520 - B3 SINE B2 0 216 23 1 1440 201 211 0 0 chr13 112076042 112076094 -8208218 + GA-rich Low_complexity Low_complexity 1 52 0 1 1440 359 286 124 85 chr13 112076163 112076316 -8207996 + RSINE1 SINE B4 5 163 -2 1 1440 707 149 212 12 chr13 112076326 112076496 -8207816 - URR1A DNA MER1_type -22 204 1 1 1440 423 286 18 18 chr13 112076683 112076797 -8207515 + PB1D10 SINE Alu 3 116 -1 1 1440 733 317 75 18 chr13 112076807 112077138 -8207174 + MLT1G1 LTR MaLR 230 579 0 1 1440 1241 313 74 9 chr13 112077916 112078551 -8205761 + L1MA4 LINE L1 5564 6239 -61 1 1440 7029 18 0 0 chr13 112078580 112079377 -8204935 - L1Md_T LINE L1 -438 5445 4649 1 1440 1149 31 0 0 chr13 112079375 112079505 -8204807 + L1Md_T LINE L1 5457 5586 -297 1 1440 9186 4 0 0 chr13 112079505 112080528 -8203784 + L1Md_T LINE L1 5587 6582 0 1 1440 609 214 0 0 chr13 112080574 112080691 -8203621 + PB1D10 SINE Alu 1 117 0 1 1440 333 276 0 22 chr13 112080730 112080819 -8203493 + Tigger5 DNA MER2_type 2 88 -2318 1 1440 208 307 76 42 chr13 112081714 112081833 -8202479 - MIRb SINE MIR -28 240 118 1 1440 800 147 8 30 chr13 112082761 112082894 -8201418 + B1_Mur4 SINE Alu 2 131 -19 1 1440 430 96 14 14 chr13 112082913 112082987 -8201325 + (GGA)n Simple_repeat Simple_repeat 2 75 0 1 1440 378 264 141 44 chr13 112083306 112083441 -8200871 + B3A SINE B2 1 148 -50 1 1440 327 113 0 0 chr13 112083441 112083494 -8200818 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1440 1903 128 51 21 chr13 112084324 112084660 -8199652 + ORR1B1 LTR MaLR 41 386 -8 1 1440 544 257 100 13 chr13 112084985 112085135 -8199177 + RSINE1 SINE B4 3 165 0 1 1440 213 209 0 0 chr13 112085137 112085180 -8199132 + (CA)n Simple_repeat Simple_repeat 1 43 0 1 1440 423 0 0 0 chr13 112085257 112085304 -8199008 + (GA)n Simple_repeat Simple_repeat 2 48 0 1 1440 931 72 29 0 chr13 112087177 112087316 -8196996 + (GGGAA)n Simple_repeat Simple_repeat 3 145 0 1 1440 1559 6 0 6 chr13 112087326 112087507 -8196805 + (GAA)n Simple_repeat Simple_repeat 1 180 0 1 1440 248 235 18 105 chr13 112087513 112087627 -8196685 + Lx8 LINE L1 7369 7472 -1 1 1440 22 0 0 0 chr13 112087627 112087649 -8196663 + AT_rich Low_complexity Low_complexity 1 22 0 1 1440 1909 252 132 30 chr13 112087710 112088374 -8195938 - Lx8 LINE L1 -2 7471 6740 1 1440 566 315 79 112 chr13 112090089 112090569 -8193743 + MLT1J LTR MaLR 42 505 -7 1 1440 351 0 0 0 chr13 112090805 112090844 -8193468 + (CA)n Simple_repeat Simple_repeat 1 39 0 1 1440 426 232 32 0 chr13 112091282 112091377 -8192935 + MTEa LTR MaLR 209 306 -73 1 1440 861 171 0 0 chr13 112091379 112091554 -8192758 + (CA)n Simple_repeat Simple_repeat 1 175 0 1 1440 350 221 11 0 chr13 112091644 112091739 -8192573 + (TG)n Simple_repeat Simple_repeat 2 97 0 1 1440 296 347 11 62 chr13 112092260 112092438 -8191874 + B4A SINE B4 106 274 -18 1 1440 311 248 65 28 chr13 112092754 112092862 -8191450 - PB1D10 SINE Alu -5 112 1 1 1440 605 269 55 35 chr13 112093363 112093563 -8190749 + ID_B1 SINE B4 4 207 -17 1 1440 207 0 0 0 chr13 112094392 112094415 -8189897 + (A)n Simple_repeat Simple_repeat 1 23 0 1 1440 370 229 42 0 chr13 112096025 112096143 -8188169 + Lx9 LINE L1 7521 7643 -1 1 1440 335 306 89 80 chr13 112096171 112096395 -8187917 + B4 SINE B4 46 271 -21 1 1440 218 234 12 49 chr13 112096400 112096481 -8187831 + (CATA)n Simple_repeat Simple_repeat 3 80 0 1 1440 1061 71 258 0 chr13 112097280 112097435 -8186877 + B2_Mm2 SINE B2 1 195 0 1 1440 4199 63 7 43 chr13 112097438 112098019 -8186293 + L1_Mus2 LINE L1 6007 6566 0 1 1440 6972 34 0 0 chr13 112098454 112099260 -8185052 + L1Md_T LINE L1 5776 6581 -1 1 1440 832 87 8 8 chr13 112099672 112099800 -8184512 + (GGA)n Simple_repeat Simple_repeat 3 130 0 1 1440 201 175 0 0 chr13 112100001 112100041 -8184271 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1440 319 179 45 0 chr13 112100057 112100124 -8184188 - HAL1-3A_ME LINE L1 -831 2027 1958 1 1440 5813 198 82 55 chr13 112101070 112101450 -8182862 + Lx9 LINE L1 5880 6409 -1235 1 1440 1392 87 16 0 chr13 112101450 112101633 -8182679 + B2_Mm2 SINE B2 2 187 -8 1 1440 5813 189 55 52 chr13 112101633 112102671 -8181641 + Lx9 LINE L1 6410 7421 -223 1 1440 462 18 0 0 chr13 112102671 112102726 -8181586 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1440 225 248 124 0 chr13 112102726 112102839 -8181473 + Lx9 LINE L1 7517 7643 -1 1 1440 492 262 159 48 chr13 112103173 112103482 -8180830 - L1MA4 LINE L1 -365 5935 5593 1 1440 7574 75 4 7 chr13 112103487 112104633 -8179679 - L1_Mus1 LINE L1 0 6567 5426 1 1440 21783 134 26 32 chr13 112104652 112108815 -8175497 - L1_Mus1 LINE L1 -1473 4410 277 1 1440 510 323 64 5 chr13 112108875 112109062 -8175250 - B3A SINE B2 0 198 1 1 1440 226 192 75 19 chr13 112109066 112109119 -8175193 - L1M3 LINE L1 -586 5603 5548 1 1440 1768 120 90 7 chr13 112109147 112109448 -8174864 + ORR1A3 LTR MaLR 1 326 0 1 1440 345 329 86 52 chr13 112109510 112109801 -8174511 - B4 SINE B4 -12 280 10 1 1440 1023 54 0 0 chr13 112109998 112110128 -8174184 + (TAGA)n Simple_repeat Simple_repeat 1 130 0 1 1440 285 228 12 48 chr13 112110165 112110248 -8174064 + L1MB3 LINE L1 5529 5608 -575 1 1440 540 255 113 78 chr13 112110267 112110497 -8173815 + B4A SINE B4 55 292 0 1 1440 400 254 24 8 chr13 112110533 112110656 -8173656 + L1MB3 LINE L1 5595 5719 -464 1 1440 417 199 17 5 chr13 112110685 112110778 -8173534 - ORR1B1 LTR MaLR 0 421 296 1 1440 446 289 28 14 chr13 112110837 112110981 -8173331 - RSINE1 SINE B4 -19 146 1 1 1440 310 149 11 33 chr13 112111134 112111224 -8173088 - Lx4B LINE L1 -4 7054 6967 1 1440 652 157 0 0 chr13 112111224 112111332 -8172980 - ORR1B1 LTR MaLR -75 319 212 1 1440 564 236 0 9 chr13 112111326 112111437 -8172875 + ID_B1 SINE B4 100 209 -15 1 1440 374 242 133 0 chr13 112111468 112111614 -8172698 + L1MB3 LINE L1 5998 6169 -14 1 1440 290 250 130 14 chr13 112111854 112111992 -8172320 + MER53 DNA hAT 40 193 0 1 1440 240 190 25 12 chr13 112112024 112112104 -8172208 + (CA)n Simple_repeat Simple_repeat 1 81 0 1 1440 485 184 5 48 chr13 112112130 112112318 -8171994 + (CA)n Simple_repeat Simple_repeat 1 180 0 1 1440 384 214 18 18 chr13 112112350 112112521 -8171791 + (CA)n Simple_repeat Simple_repeat 1 171 0 1 1440 346 209 7 28 chr13 112112554 112112697 -8171615 + (CA)n Simple_repeat Simple_repeat 1 140 0 1 1440 1395 269 128 56 chr13 112112723 112113362 -8170950 - Lx8 LINE L1 -10 7463 6779 1 1440 428 275 150 0 chr13 112114015 112114135 -8170177 - RSINE1 SINE B4 -19 146 9 1 1440 212 207 17 33 chr13 112114213 112114273 -8170039 + CT-rich Low_complexity Low_complexity 2 60 0 1 1440 1647 169 110 3 chr13 112114849 112115175 -8169137 - ORR1B2 LTR MaLR -6 361 1 1 1440 824 265 0 0 chr13 112115640 112115829 -8168483 + B3 SINE B2 9 197 -19 1 1440 22 35 0 0 chr13 112115847 112115876 -8168436 + AT_rich Low_complexity Low_complexity 1 29 0 1 1440 1033 53 68 0 chr13 112115884 112116017 -8168295 + B1_Mus1 SINE Alu 1 142 -6 1 1440 3343 62 57 5 chr13 112117332 112117770 -8166542 + L1_Mus3 LINE L1 6173 6633 -5 1 1440 1250 48 0 0 chr13 112117791 112117938 -8166374 + B1_Mus2 SINE Alu 1 147 0 1 1440 764 278 126 34 chr13 112117992 112118349 -8165963 - MLT1B LTR MaLR 0 390 1 1 1440 270 0 0 0 chr13 112118446 112118476 -8165836 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 1440 546 57 0 0 chr13 112118476 112118545 -8165767 + (CA)n Simple_repeat Simple_repeat 1 70 0 1 1440 231 261 0 0 chr13 112118698 112118744 -8165568 + MLT1E3 LTR MaLR 65 110 -514 1 1440 441 0 0 0 chr13 112118746 112118795 -8165517 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1 1440 275 296 14 14 chr13 112118935 112119007 -8165305 + ID4 SINE ID 2 73 -10 1 1440 896 62 8 0 chr13 112119007 112119135 -8165177 + (TAGA)n Simple_repeat Simple_repeat 2 130 0 1 1440 225 94 0 0 chr13 112119393 112119425 -8164887 + (CCA)n Simple_repeat Simple_repeat 1 32 0 1 1440 609 90 0 0 chr13 112120327 112120416 -8163896 + (GGGA)n Simple_repeat Simple_repeat 3 91 0 1 1440 402 115 0 0 chr13 112120511 112120572 -8163740 + (TTTC)n Simple_repeat Simple_repeat 2 62 0 1 1440 481 270 161 28 chr13 112120891 112121146 -8163166 + B4A SINE B4 2 290 -2 1 1440 308 274 0 35 chr13 112121147 112121234 -8163078 + (CA)n Simple_repeat Simple_repeat 2 85 0 1 1440 569 174 157 0 chr13 112121282 112121397 -8162915 + B1_Mus1 SINE Alu 5 137 -11 1 1440 2371 59 7 3 chr13 112121606 112121910 -8162402 - L1Md_F3 LINE L1 0 6584 6280 1 1440 729 215 126 0 chr13 112121950 112122141 -8162171 + B3 SINE B2 2 216 0 1 1440 282 147 0 0 chr13 112122513 112122581 -8161731 + (TTGGGG)n Simple_repeat Simple_repeat 2 69 0 1 1440 203 113 0 102 chr13 112122581 112122640 -8161672 + T-rich Low_complexity Low_complexity 2 54 0 1 1440 321 146 142 200 chr13 112122643 112122763 -8161549 - PB1D9 SINE Alu -7 113 1 1 1440 531 0 0 0 chr13 112123095 112123154 -8161158 + (GA)n Simple_repeat Simple_repeat 1 59 0 1 1440 702 21 10 20 chr13 112123951 112124049 -8160263 + (GA)n Simple_repeat Simple_repeat 2 98 0 1 1440 328 261 0 0 chr13 112124193 112124258 -8160054 + ID4_ SINE ID 5 69 -14 1 1440 4595 135 14 24 chr13 112125571 112126332 -8157980 - Lx LINE L1 -1 6653 5900 1 1440 1348 99 5 16 chr13 112126684 112126869 -8157443 - B2_Mm1t SINE B2 -9 184 2 1 1440 24 0 0 0 chr13 112127040 112127064 -8157248 + AT_rich Low_complexity Low_complexity 1 24 0 1 1440 582 279 16 16 chr13 112127537 112127719 -8156593 - MER74C LTR ERVL -268 192 11 1 1440 329 176 10 52 chr13 112128122 112128218 -8156094 - Lx3C LINE L1 0 6976 6885 1 1440 4459 53 6 0 chr13 112128235 112128783 -8155529 - L1Md_F2 LINE L1 -2 6580 6030 1 1440 1419 258 58 21 chr13 112128820 112129299 -8155013 + L1MC LINE L1 2402 2898 -3248 1 1440 325 158 76 38 chr13 112129301 112129380 -8154932 + Lx7 LINE L1 6107 6188 -1508 1 1440 375 144 31 39 chr13 112129427 112129557 -8154755 + (TA)n Simple_repeat Simple_repeat 1 129 0 2 1440 808 161 57 25 chr13 112129568 112129727 -8154585 + Lx7 LINE L1 6176 6339 -1357 1 1440 435 310 92 62 chr13 112129726 112129799 -8154513 + L1MC LINE L1 3206 3279 -2864 2 1440 306 270 0 0 chr13 112129799 112129862 -8154450 + ID4 SINE ID 2 64 -19 2 1440 1906 264 66 83 chr13 112129862 112130739 -8153573 + L1MC LINE L1 3280 4131 -2015 2 1440 1210 56 60 27 chr13 112130739 112130923 -8153389 + L1Md_F3 LINE L1 6395 6584 0 2 1440 1906 263 66 84 chr13 112130923 112131055 -8153257 + L1MC LINE L1 4132 4252 -1894 2 1440 278 309 21 0 chr13 112131062 112131156 -8153156 + GA-rich Low_complexity Low_complexity 5 100 0 2 1440 892 254 192 15 chr13 112131206 112131364 -8152948 + L1MC LINE L1 4282 4476 -1670 2 1440 240 35 0 0 chr13 112131364 112131393 -8152919 + (TTAA)n Simple_repeat Simple_repeat 4 32 0 2 1440 892 254 192 15 chr13 112131393 112131629 -8152683 + L1MC LINE L1 4477 4745 -1401 2 1440 374 47 0 0 chr13 112131705 112131748 -8152564 - L1_Mus3 LINE L1 -428 6208 6166 2 1440 2218 58 64 3 chr13 112131748 112132043 -8152269 + L1_Mus3 LINE L1 6314 6626 -12 2 1440 28 48 0 0 chr13 112132056 112132098 -8152214 + AT_rich Low_complexity Low_complexity 1 42 0 2 1440 354 147 0 0 chr13 112132221 112132289 -8152023 + (TA)n Simple_repeat Simple_repeat 2 69 0 2 1440 285 312 36 9 chr13 112132556 112132666 -8151646 + RSINE1 SINE B4 2 114 -51 2 1440 641 246 7 21 chr13 112132671 112132812 -8151500 + B1_Mur1 SINE Alu 1 139 -10 2 1440 338 233 0 40 chr13 112132856 112132932 -8151380 + B1_Mur1 SINE Alu 77 149 0 2 1440 446 0 19 0 chr13 112132999 112133053 -8151259 + (CACAT)n Simple_repeat Simple_repeat 1 55 0 2 1440 237 200 20 0 chr13 112133417 112133467 -8150845 + (TA)n Simple_repeat Simple_repeat 1 51 0 2 1440 1658 204 76 5 chr13 112133470 112133839 -8150473 - Lx9 LINE L1 -128 7516 7122 2 1440 933 135 9 81 chr13 112133839 112133965 -8150347 + MT2A LTR ERVL 339 463 -70 2 1440 189 0 0 0 chr13 112133965 112133986 -8150326 + (TG)n Simple_repeat Simple_repeat 2 22 0 2 1440 933 135 9 81 chr13 112133986 112134069 -8150243 + MT2A LTR ERVL 464 533 0 2 1440 369 202 64 46 chr13 112134579 112134688 -8149624 - B1F SINE Alu -2 147 37 2 1440 736 207 21 0 chr13 112134704 112134849 -8149463 + B1_Mur3 SINE Alu 2 149 0 2 1440 754 221 109 10 chr13 112136777 112136978 -8147334 + ID_B1 SINE B4 3 223 -1 2 1440 200 302 46 19 chr13 112137085 112137193 -8147119 - MIR SINE MIR -23 239 129 2 1440 233 286 101 10 chr13 112137721 112137820 -8146492 + MLT1B LTR MaLR 274 381 -9 2 1440 307 301 34 34 chr13 112138058 112138206 -8146106 + MLT1J2 LTR MaLR 58 205 -243 2 1440 183 328 40 16 chr13 112138569 112138716 -8145596 - MIRb SINE MIR -97 179 29 2 1440 566 228 46 15 chr13 112138812 112138962 -8145350 + B1F1 SINE Alu 5 148 -1 2 1440 264 211 0 0 chr13 112139437 112139508 -8144804 + (CA)n Simple_repeat Simple_repeat 2 72 0 2 1440 2939 57 0 3 chr13 112139640 112140011 -8144301 + L1Md_F2 LINE L1 6213 6582 0 2 1440 372 22 0 0 chr13 112140282 112140327 -8143985 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1440 552 68 0 0 chr13 112140327 112140399 -8143913 + (TA)n Simple_repeat Simple_repeat 2 74 0 2 1440 545 281 122 20 chr13 112140634 112140948 -8143364 + ORR1E LTR MaLR 1 379 0 2 1440 3022 124 68 13 chr13 112141025 112141565 -8142747 - RLTR20B3 LTR ERVK 0 577 8 2 1440 603 210 56 8 chr13 112141815 112141940 -8142372 + ID_B1 SINE B4 84 214 -10 2 1440 224 274 0 16 chr13 112142100 112142163 -8142149 + (TGGA)n Simple_repeat Simple_repeat 4 65 0 2 1440 202 214 0 0 chr13 112142287 112142329 -8141983 + CT-rich Low_complexity Low_complexity 3 44 0 2 1440 279 0 0 0 chr13 112142335 112142366 -8141946 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1440 213 292 0 0 chr13 112142366 112142431 -8141881 - PB1D10 SINE Alu -13 104 40 2 1440 262 280 95 74 chr13 112143071 112143260 -8141052 - MIRc SINE MIR -65 203 11 2 1440 180 0 0 0 chr13 112143511 112143531 -8140781 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1440 337 260 132 13 chr13 112144206 112144358 -8139954 - MER33 DNA MER1_type -1 323 154 2 1440 313 341 71 86 chr13 112145295 112145605 -8138707 + MER20B DNA MER1_type 3 307 -476 2 1440 5153 4 0 0 chr13 112145605 112146165 -8138147 - L1Md_A LINE L1 0 6582 6023 2 1440 313 341 71 86 chr13 112146165 112146204 -8138108 + MER20B DNA MER1_type 308 346 -437 2 1440 263 328 66 11 chr13 112146382 112146564 -8137748 + MER20B DNA MER1_type 525 716 -67 2 1440 409 261 137 11 chr13 112147583 112147773 -8136539 + ORR1E LTR MaLR 1 214 -145 2 1440 1704 21 0 0 chr13 112147972 112148162 -8136150 - B2_Mm1t SINE B2 -2 191 2 2 1440 453 228 181 98 chr13 112148217 112148342 -8135970 - Lx8 LINE L1 -6 7467 7345 2 1440 913 68 14 0 chr13 112148342 112148489 -8135823 + (TAGA)n Simple_repeat Simple_repeat 1 149 0 2 1440 453 228 181 98 chr13 112148489 112148640 -8135672 - Lx8 LINE L1 -129 7344 7168 2 1440 309 309 125 0 chr13 112148675 112148811 -8135501 - Lx7 LINE L1 -601 7095 6943 2 1440 301 58 0 37 chr13 112149502 112149556 -8134756 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 2 1440 198 307 112 21 chr13 112149657 112149800 -8134512 - MIRb SINE MIR -31 237 82 2 1440 396 0 0 0 chr13 112149801 112149845 -8134467 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1440 3476 209 50 17 chr13 112150098 112150769 -8133543 + Lx9 LINE L1 6450 7149 -495 2 1440 2322 106 16 0 chr13 112150769 112151091 -8133221 - ORR1A2 LTR MaLR 0 327 1 2 1440 3476 209 50 17 chr13 112151091 112151121 -8133191 + Lx9 LINE L1 7150 7174 -470 2 1440 408 169 79 71 chr13 112151223 112151363 -8132949 - RLTR15 LTR ERVK -218 141 1 2 1440 302 82 41 0 chr13 112153134 112153183 -8131129 + (TTTTC)n Simple_repeat Simple_repeat 5 55 0 2 1440 495 0 0 0 chr13 112153183 112153238 -8131074 + (TC)n Simple_repeat Simple_repeat 2 56 0 2 1440 1101 70 28 0 chr13 112154163 112154306 -8130006 + B1_Mm SINE Alu 1 147 0 2 1440 367 202 52 60 chr13 112154313 112154429 -8129883 - Lx9 LINE L1 -10 7634 7520 2 1440 285 246 60 17 chr13 112154429 112154545 -8129767 + RLTR15 LTR ERVK 221 341 -18 2 1440 1422 81 14 5 chr13 112154732 112154942 -8129370 + L1_Mus3 LINE L1 6421 6632 -6 2 1440 430 254 111 14 chr13 112155114 112155330 -8128982 + MER89 LTR ERV1 240 476 -83 2 1440 265 93 23 0 chr13 112155687 112155730 -8128582 - MTC LTR MaLR -2 417 374 2 1440 1921 241 24 49 chr13 112155730 112156180 -8128132 + Lx6 LINE L1 7021 7459 -1 2 1440 1226 54 0 0 chr13 112156180 112156327 -8127985 + B1_Mm SINE Alu 1 147 0 2 1440 776 192 141 70 chr13 112156334 112156667 -8127645 - MTC LTR MaLR -31 390 1 2 1440 204 273 36 72 chr13 112158119 112158202 -8126110 + L2c LINE L2 3287 3366 -21 2 1440 337 376 46 6 chr13 112158559 112158733 -8125579 - MLT1L LTR MaLR -216 394 214 2 1440 1093 98 212 5 chr13 112158922 112159106 -8125206 - URR1A DNA MER1_type 0 226 5 2 1440 198 326 152 46 chr13 112159173 112159324 -8124988 - MIR SINE MIR -76 186 20 2 1440 243 0 0 0 chr13 112159780 112159807 -8124505 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1440 962 268 38 102 chr13 112160104 112160527 -8123785 - MTD LTR MaLR -16 403 8 2 1440 5194 46 0 14 chr13 112160900 112161541 -8122771 + L1Md_F2 LINE L1 5951 6582 0 2 1440 1884 147 77 14 chr13 112161936 112162287 -8122025 - ORR1B1 LTR MaLR -21 373 1 2 1440 490 341 83 40 chr13 112162292 112162619 -8121693 + MTEa LTR MaLR 15 355 -24 2 1440 451 145 20 38 chr13 112162925 112163033 -8121279 - B1_Mur1 SINE Alu 0 149 18 2 1440 400 309 130 8 chr13 112163463 112163701 -8120611 + MIRc SINE MIR 2 268 0 2 1440 583 242 69 69 chr13 112164290 112164450 -8119862 + ID_B1 SINE B4 82 245 -47 2 1440 957 131 17 0 chr13 112164467 112164643 -8119669 + (GA)n Simple_repeat Simple_repeat 1 179 0 2 1440 903 153 9 5 chr13 112164657 112164881 -8119431 + GA-rich Low_complexity Low_complexity 1 224 0 2 1440 751 158 17 11 chr13 112164885 112164971 -8119341 + polypurine Low_complexity Low_complexity 1 88 0 2 1440 935 124 17 6 chr13 112164971 112165149 -8119163 + (GA)n Simple_repeat Simple_repeat 1 180 0 2 1440 751 158 17 11 chr13 112165149 112165241 -8119071 + polypurine Low_complexity Low_complexity 89 179 0 2 1440 296 233 16 16 chr13 112165245 112165367 -8118945 + GA-rich Low_complexity Low_complexity 1 122 0 2 1440 372 22 0 0 chr13 112165548 112165593 -8118719 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1440 1457 86 0 5 chr13 112165637 112165824 -8118488 + B2_Mm2 SINE B2 3 188 -7 2 1440 24 0 0 0 chr13 112166891 112166915 -8117397 + AT_rich Low_complexity Low_complexity 1 24 0 2 1440 582 114 0 0 chr13 112166954 112167042 -8117270 + (GAAA)n Simple_repeat Simple_repeat 2 89 0 2 1440 6566 211 120 26 chr13 112167047 112168981 -8115331 + Lx9 LINE L1 5332 7475 -169 2 1440 615 117 0 0 chr13 112168981 112169075 -8115237 + (TG)n Simple_repeat Simple_repeat 2 95 0 2 1440 6566 214 147 27 chr13 112169075 112169185 -8115127 + Lx9 LINE L1 7476 7643 -1 2 1440 236 132 4 0 chr13 112169190 112169241 -8115071 + B3 SINE B2 2 53 -145 2 1440 746 194 128 6 chr13 112169241 112169397 -8114915 + RMER1C Other Other 1044 1218 -124 2 1440 252 184 0 0 chr13 112169397 112169446 -8114866 + CT-rich Low_complexity Low_complexity 2 50 0 2 1440 712 189 15 22 chr13 112169451 112169586 -8114726 + RMER1C Other Other 1201 1334 -8 2 1440 520 234 12 34 chr13 112169587 112169752 -8114560 + B3 SINE B2 23 176 -19 2 1440 1005 114 14 9 chr13 112170230 112170443 -8113869 + (TTC)n Simple_repeat Simple_repeat 1 214 0 2 1440 333 359 140 29 chr13 112171233 112171646 -8112666 - Kanga1 DNA Tc2 -1144 601 143 2 1440 975 278 39 50 chr13 112171776 112172139 -8112173 - ORR1E LTR MaLR 0 359 1 2 1440 332 365 108 31 chr13 112172291 112172577 -8111735 - LTR33 LTR ERVL -70 445 138 2 1440 1090 260 83 39 chr13 112172627 112173010 -8111302 + Lx8 LINE L1 6871 7299 -174 2 1440 409 38 0 0 chr13 112173038 112173091 -8111221 + ORR1A4 LTR MaLR 269 321 -8 2 1440 2586 268 25 12 chr13 112173102 112173748 -8110564 - Lx8 LINE L1 -558 6915 6262 2 1440 21 0 0 0 chr13 112174713 112174734 -8109578 + AT_rich Low_complexity Low_complexity 1 21 0 2 1440 354 361 73 65 chr13 112174947 112175332 -8108980 - MER74B LTR ERVL -111 511 124 2 1440 467 116 0 23 chr13 112175377 112175465 -8108847 - L1Md_F2 LINE L1 0 6582 6497 2 1440 579 264 58 16 chr13 112175517 112175706 -8108606 + MLT2B4 LTR ERVL 6 202 -354 3 1440 269 299 55 104 chr13 112175687 112175710 -8108602 + B4 SINE B4 67 217 -75 3 1440 688 196 35 7 chr13 112175710 112175844 -8108468 + B1_Mur1 SINE Alu 2 140 -9 3 1440 414 57 0 0 chr13 112175844 112175897 -8108415 + (TAGA)n Simple_repeat Simple_repeat 4 56 0 3 1440 269 299 55 104 chr13 112175906 112175922 -8108390 + B4 SINE B4 218 240 -52 3 1440 1181 98 7 0 chr13 112176015 112176312 -8108000 + (CA)n Simple_repeat Simple_repeat 1 299 0 3 1440 1055 124 6 0 chr13 112176343 112176520 -8107792 + (CA)n Simple_repeat Simple_repeat 2 179 0 3 1440 26 0 0 0 chr13 112176529 112176555 -8107757 + AT_rich Low_complexity Low_complexity 1 26 0 3 1440 271 339 82 57 chr13 112176586 112176780 -8107532 + MLT2B4 LTR ERVL 256 454 -66 3 1440 220 254 18 0 chr13 112176781 112176836 -8107476 + (TAGA)n Simple_repeat Simple_repeat 4 59 0 3 1440 764 282 6 0 chr13 112177012 112177193 -8107119 + B3A SINE B2 1 182 -16 3 1440 22 35 0 0 chr13 112177220 112177249 -8107063 + AT_rich Low_complexity Low_complexity 1 29 0 3 1440 27 73 0 0 chr13 112177510 112177565 -8106747 + AT_rich Low_complexity Low_complexity 1 55 0 3 1440 1039 114 17 11 chr13 112177577 112177755 -8106557 + (GAAAA)n Simple_repeat Simple_repeat 2 180 0 3 1440 796 254 67 22 chr13 112178211 112178476 -8105836 + ORR1D2 LTR MaLR 1 278 -92 3 1440 1352 17 0 37 chr13 112178476 112178663 -8105649 + (TCTCCC)n Simple_repeat Simple_repeat 1 180 0 3 1440 522 103 0 0 chr13 112178667 112178745 -8105567 + (CCCCCT)n Simple_repeat Simple_repeat 6 83 0 3 1440 216 0 0 0 chr13 112178748 112178772 -8105540 + (CA)n Simple_repeat Simple_repeat 1 24 0 3 1440 294 152 68 0 chr13 112178863 112178922 -8105390 + MLT1A LTR MaLR 1 63 -311 3 1440 262 313 0 0 chr13 112178921 112179004 -8105308 + MLT1B LTR MaLR 289 371 -19 3 1440 539 197 89 22 chr13 112181898 112182033 -8102279 + B1_Mur1 SINE Alu 6 149 0 3 1440 368 273 30 0 chr13 112182040 112182139 -8102173 + RSINE1 SINE B4 18 119 -46 3 1440 399 113 0 0 chr13 112182149 112182211 -8102101 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1440 444 319 92 8 chr13 112182883 112183123 -8101189 + L1MA4A LINE L1 5681 5940 -363 3 1440 1085 123 6 0 chr13 112183239 112183410 -8100902 + B2_Mm2 SINE B2 2 173 -22 3 1440 377 108 299 10 chr13 112183441 112183544 -8100768 + B2_Mm2 SINE B2 46 183 -12 3 1440 1933 176 98 14 chr13 112183696 112184123 -8100189 + RMER1B Other Other 591 1053 -13 3 1440 1261 194 167 20 chr13 112184141 112184489 -8099823 + Lx2B LINE L1 6602 7000 0 3 1440 201 147 0 0 chr13 112184753 112184787 -8099525 + (CTCG)n Simple_repeat Simple_repeat 3 36 0 3 1440 711 297 72 14 chr13 112185614 112185891 -8098421 - MLT1C LTR MaLR -1 466 174 3 1440 228 216 0 0 chr13 112186091 112186142 -8098170 + C-rich Low_complexity Low_complexity 1 51 0 3 1440 920 156 55 11 chr13 112186240 112186422 -8097890 + URR1B DNA MER1_type 5 194 -31 3 1440 1238 91 45 6 chr13 112186878 112187055 -8097257 + B2_Mm2 SINE B2 4 187 -8 3 1440 204 328 72 0 chr13 112187075 112187200 -8097112 - MIR SINE MIR -77 185 52 3 1440 266 270 101 0 chr13 112188299 112188388 -8095924 - MER20 DNA MER1_type 0 219 122 3 1440 365 39 0 19 chr13 112188451 112188503 -8095809 + (TG)n Simple_repeat Simple_repeat 2 52 0 3 1440 1006 69 14 0 chr13 112189298 112189442 -8094870 + (TAGA)n Simple_repeat Simple_repeat 3 148 0 3 1440 278 209 75 21 chr13 112189788 112189881 -8094431 - MLT1C LTR MaLR -49 418 321 3 1440 231 211 58 0 chr13 112190050 112190102 -8094210 - MLT1C LTR MaLR -321 69 15 3 1440 5665 33 1 0 chr13 112190577 112191245 -8093067 - L1Md_F3 LINE L1 -847 5036 4368 3 1440 4381 54 2 2 chr13 112191244 112191785 -8092527 + L1Md_F3 LINE L1 5046 5586 -297 3 1440 8433 32 1 2 chr13 112191785 112192770 -8091542 + L1Md_F3 LINE L1 5587 6570 -14 3 1440 27 29 0 0 chr13 112192834 112192868 -8091444 + AT_rich Low_complexity Low_complexity 1 34 0 3 1440 575 238 66 0 chr13 112193067 112193189 -8091123 + B1_Mus1 SINE Alu 3 132 -16 3 1440 468 0 0 0 chr13 112193191 112193243 -8091069 + (TG)n Simple_repeat Simple_repeat 2 53 0 3 1440 204 97 0 0 chr13 112193279 112193310 -8091002 + (TA)n Simple_repeat Simple_repeat 1 31 0 3 1440 432 0 0 0 chr13 112193480 112193528 -8090784 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 3 1440 379 142 38 38 chr13 112193542 112193674 -8090638 + (TA)n Simple_repeat Simple_repeat 2 133 0 3 1440 1496 256 53 5 chr13 112193808 112194201 -8090111 - MTD LTR MaLR 0 419 8 3 1440 407 67 0 0 chr13 112194371 112194431 -8089881 - Lx LINE L1 -6 6648 6589 3 1440 1211 127 0 133 chr13 112194434 112194511 -8089801 + L1_Mm LINE L1 5037 5113 -770 3 1440 1141 82 0 0 chr13 112194511 112194658 -8089654 + B1_Mus2 SINE Alu 1 147 0 3 1440 1211 127 0 133 chr13 112194658 112194835 -8089477 + L1_Mm LINE L1 5114 5257 -626 3 1440 724 211 0 52 chr13 112194874 112195029 -8089283 + B1_Mus2 SINE Alu 1 147 0 3 1440 792 118 0 0 chr13 112195036 112195163 -8089149 + (GGAA)n Simple_repeat Simple_repeat 4 130 0 3 1440 1485 167 87 46 chr13 112195715 112196061 -8088251 + MTC LTR MaLR 1 360 -61 3 1440 272 231 45 15 chr13 112196178 112196244 -8088068 + ID4_ SINE ID 2 69 -14 3 1440 360 0 0 0 chr13 112196248 112196288 -8088024 + (GA)n Simple_repeat Simple_repeat 2 41 0 3 1440 429 299 63 0 chr13 112196410 112196584 -8087728 + MER5A DNA MER1_type 5 189 0 3 1440 183 100 0 0 chr13 112196608 112196638 -8087674 + (CACG)n Simple_repeat Simple_repeat 1 30 0 3 1440 235 373 6 18 chr13 112197124 112197288 -8087024 + L1MEg LINE L1 49 210 -5874 3 1440 432 0 0 0 chr13 112197434 112197482 -8086830 + (TG)n Simple_repeat Simple_repeat 2 49 0 3 1441 328 305 42 0 chr13 112197686 112197781 -8086531 + B1F2 SINE Alu 8 106 -43 3 1441 624 172 0 0 chr13 112198450 112198566 -8085746 + (TG)n Simple_repeat Simple_repeat 2 117 0 3 1441 342 0 0 0 chr13 112198566 112198604 -8085708 + (GA)n Simple_repeat Simple_repeat 1 38 0 3 1441 390 21 0 0 chr13 112198703 112198750 -8085562 + (GAAA)n Simple_repeat Simple_repeat 4 50 0 3 1441 506 210 8 0 chr13 112198871 112198990 -8085322 + CT-rich Low_complexity Low_complexity 1 120 0 3 1441 3482 30 2 0 chr13 112199056 112199451 -8084861 + MTA_Mm LTR MaLR 1 396 0 3 1441 321 68 0 0 chr13 112200133 112200177 -8084135 + (TG)n Simple_repeat Simple_repeat 1 44 0 3 1441 196 258 245 10 chr13 112200512 112200610 -8083702 - MIRc SINE MIR -119 149 29 3 1441 180 0 0 0 chr13 112200931 112200951 -8083361 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 3 1441 418 224 55 18 chr13 112201456 112201565 -8082747 - PB1D10 SINE Alu -2 115 3 3 1441 257 267 83 73 chr13 112201600 112201818 -8082494 + L1MA6 LINE L1 6079 6298 -2 3 1441 230 259 0 0 chr13 112201874 112201932 -8082380 + L1MB1 LINE L1 6021 6078 -111 3 1441 454 185 111 56 chr13 112202288 112202414 -8081898 + ORR1B2 LTR MaLR 235 367 0 3 1441 552 68 0 0 chr13 112202806 112202879 -8081433 + (TA)n Simple_repeat Simple_repeat 2 74 0 3 1441 805 172 22 0 chr13 112203066 112203200 -8081112 - B1_Mur4 SINE Alu -12 138 2 3 1441 928 41 0 0 chr13 112203761 112203883 -8080429 + B1_Mus2 SINE Alu 26 147 0 3 1441 1021 123 7 7 chr13 112203990 112204137 -8080175 + B1_Mus1 SINE Alu 2 148 0 3 1441 224 270 67 11 chr13 112204412 112204502 -8079810 + PB1D10 SINE Alu 15 109 -8 3 1441 466 267 99 58 chr13 112204486 112204577 -8079735 + B4A SINE B4 14 117 -175 3 1441 2060 141 60 82 chr13 112204577 112204978 -8079334 - ORR1B1 LTR MaLR -2 392 1 3 1441 466 267 99 58 chr13 112204978 112205077 -8079235 + B4A SINE B4 118 212 -80 3 1441 1188 196 124 50 chr13 112205131 112205326 -8078986 + ORR1D1 LTR MaLR 28 228 -146 3 1441 612 0 0 0 chr13 112205326 112205394 -8078918 + (CCTG)n Simple_repeat Simple_repeat 3 70 0 3 1441 1188 196 124 50 chr13 112205394 112205520 -8078792 + ORR1D1 LTR MaLR 229 372 -2 3 1441 551 273 45 13 chr13 112205850 112206006 -8078306 + RSINE1 SINE B4 4 164 -1 3 1441 1680 162 51 92 chr13 112206254 112206647 -8077665 - ORR1C1 LTR MaLR 0 378 2 3 1441 277 103 82 49 chr13 112206748 112206809 -8077503 - L1_Mm LINE L1 -2322 3561 3499 3 1441 740 21 0 0 chr13 112206809 112206904 -8077408 + L1Md_T LINE L1 6488 6582 0 3 1441 358 305 83 28 chr13 112206958 112207174 -8077138 - L1MC4a LINE L1 -1933 5949 5722 3 1441 1191 68 0 0 chr13 112207445 112207592 -8076720 + B1_Mm SINE Alu 1 147 0 3 1441 438 211 89 0 chr13 112207828 112207951 -8076361 + MLT1D LTR MaLR 1 134 -371 3 1441 296 340 30 0 chr13 112208040 112208128 -8076184 + ORR1E LTR MaLR 24 114 -245 3 1441 661 144 16 48 chr13 112208128 112208252 -8076060 + B1_Mus1 SINE Alu 2 121 -27 3 1441 416 148 165 19 chr13 112208320 112208423 -8075889 + ORR1E LTR MaLR 98 215 -144 3 1441 1355 157 40 25 chr13 112208561 112208835 -8075477 + RMER15 LTR ERVL 295 572 -3 3 1441 1154 64 0 0 chr13 112209367 112209508 -8074804 + B1_Mus2 SINE Alu 2 142 -5 3 1441 818 125 4 73 chr13 112209524 112209789 -8074523 + G-rich Low_complexity Low_complexity 1 246 0 3 1441 328 232 36 12 chr13 112209844 112209927 -8074385 + Arthur1B DNA Tip100 232 316 -909 3 1441 300 224 67 56 chr13 112210000 112210090 -8074222 + B1_Mur2 SINE Alu 13 103 -46 3 1441 180 0 0 0 chr13 112210099 112210119 -8074193 + (TCCC)n Simple_repeat Simple_repeat 2 21 0 3 1441 349 214 107 0 chr13 112210183 112210267 -8074045 - PB1D9 SINE Alu -20 100 8 3 1441 1359 88 33 5 chr13 112210271 112210455 -8073857 - B2_Mm2 SINE B2 -5 190 2 3 1441 238 287 33 107 chr13 112210588 112210709 -8073603 + PB1D10 SINE Alu 6 117 0 3 1441 253 266 0 15 chr13 112210645 112210710 -8073602 + ID_B1 SINE B4 161 224 0 3 1441 536 263 113 0 chr13 112210869 112211063 -8073249 - MER2 DNA MER2_type -1 344 129 3 1441 375 250 185 0 chr13 112211805 112211897 -8072415 + ID_B1 SINE B4 86 194 -30 3 1441 296 246 69 18 chr13 112211980 112212101 -8072211 - B1_Mur4 SINE Alu -6 144 22 3 1441 1194 62 0 0 chr13 112212119 112212265 -8072047 - B1_Mus1 SINE Alu -1 147 2 3 1441 251 317 0 24 chr13 112212359 112212443 -8071869 + B1F SINE Alu 47 128 -21 4 1441 443 321 54 0 chr13 112212472 112212640 -8071672 + B3A SINE B2 1 177 -21 4 1441 195 42 0 0 chr13 112212897 112212921 -8071391 + (TTA)n Simple_repeat Simple_repeat 2 25 0 4 1441 261 287 65 56 chr13 112213178 112213202 -8071110 + ID SINE ID 51 75 -149 4 1441 378 229 93 28 chr13 112213202 112213310 -8071002 + B1F1 SINE Alu 1 115 -34 4 1441 259 203 0 33 chr13 112213312 112213373 -8070939 + GA-rich Low_complexity Low_complexity 3 61 0 4 1441 620 194 23 17 chr13 112213375 112213548 -8070764 + G-rich Low_complexity Low_complexity 1 174 0 4 1441 302 314 0 0 chr13 112213550 112213620 -8070692 + polypurine Low_complexity Low_complexity 5 74 0 4 1441 395 19 19 0 chr13 112215175 112215227 -8069085 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1441 346 194 0 0 chr13 112215524 112215591 -8068721 + B3A SINE B2 71 137 -61 4 1441 346 271 118 15 chr13 112217014 112217149 -8067163 + B1F SINE Alu 1 149 0 4 1441 1666 37 0 0 chr13 112217242 112217433 -8066879 + B2_Mm1a SINE B2 1 191 -2 4 1441 1012 53 0 0 chr13 112217638 112217771 -8066541 + B1_Mus1 SINE Alu 9 141 -7 4 1441 227 264 0 0 chr13 112218366 112218419 -8065893 - B4A SINE B4 -239 53 1 4 1441 395 245 38 0 chr13 112220063 112220169 -8064143 + L1MB8 LINE L1 4506 4615 -1525 4 1441 754 207 15 7 chr13 112220354 112220490 -8063822 + B1_Mus1 SINE Alu 1 137 -11 4 1441 240 209 196 18 chr13 112220536 112220648 -8063664 + L1MB8 LINE L1 4643 4774 -1372 4 1441 229 303 134 70 chr13 112220663 112220805 -8063507 + ID_B1 SINE B4 25 175 -49 4 1441 33 0 0 0 chr13 112220823 112220856 -8063456 + AT_rich Low_complexity Low_complexity 1 33 0 4 1441 312 293 104 42 chr13 112220958 112221054 -8063258 - RSINE1 SINE B4 -63 102 1 4 1441 333 0 0 0 chr13 112221064 112221101 -8063211 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 4 1441 512 236 15 52 chr13 112221496 112221630 -8062682 + B3 SINE B2 9 137 -79 4 1441 399 245 142 53 chr13 112221750 112221826 -8062486 + L1MB8 LINE L1 5333 5402 -772 4 1441 1089 229 52 88 chr13 112221826 112222213 -8062099 + ORR1D1 LTR MaLR 2 374 0 4 1441 399 245 142 53 chr13 112222213 112222382 -8061930 + L1MB8 LINE L1 5403 5599 -575 4 1441 556 223 57 114 chr13 112222404 112222632 -8061680 - B3 SINE B2 -1 215 1 4 1441 397 278 60 9 chr13 112222653 112222769 -8061543 - RSINE1 SINE B4 -31 134 13 4 1441 517 162 430 0 chr13 112222898 112223040 -8061272 - B3 SINE B2 -10 206 4 4 1441 350 258 0 0 chr13 112223043 112223109 -8061203 - RSINE1 SINE B4 -79 86 21 4 1441 271 115 77 0 chr13 112223136 112223188 -8061124 + L1MB3 LINE L1 6059 6114 -69 4 1441 604 112 50 107 chr13 112225104 112225244 -8059068 + B1_Mm SINE Alu 16 147 0 4 1441 242 211 27 40 chr13 112225341 112225415 -8058897 + ID2 SINE ID 2 74 -9 4 1441 596 231 26 33 chr13 112225995 112226147 -8058165 + B3 SINE B2 60 210 -6 4 1441 322 258 203 13 chr13 112226164 112226317 -8057995 + L1MB8 LINE L1 5799 5980 -198 4 1441 276 326 22 22 chr13 112226435 112226447 -8057865 + B4 SINE B4 76 123 -169 4 1441 339 211 28 0 chr13 112226447 112226518 -8057794 + B1_Mus2 SINE Alu 1 73 -74 4 1441 183 42 0 0 chr13 112227068 112227092 -8057220 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 4 1441 220 245 44 221 chr13 112227287 112227423 -8056889 + B1_Mur4 SINE Alu 1 112 -38 4 1441 626 182 83 0 chr13 112227869 112227990 -8056322 + B1_Mur4 SINE Alu 7 137 -13 4 1441 315 303 0 0 chr13 112229190 112229266 -8055046 + PB1 SINE Alu 39 114 -13 4 1441 298 153 189 27 chr13 112229618 112229692 -8054620 - B1F SINE Alu -55 94 9 4 1441 290 331 162 23 chr13 112229753 112229926 -8054386 + B3A SINE B2 1 197 -1 4 1441 499 213 147 16 chr13 112229936 112230065 -8054247 + B1_Mur3 SINE Alu 3 148 -1 4 1441 418 294 147 0 chr13 112230097 112230233 -8054079 + RSINE1 SINE B4 4 159 -6 4 1441 927 73 36 7 chr13 112230555 112230693 -8053619 + B1_Mus1 SINE Alu 7 148 0 4 1441 255 93 0 0 chr13 112230702 112230745 -8053567 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1441 629 57 0 0 chr13 112231395 112231483 -8052829 - L1Md_A LINE L1 0 6582 6495 4 1441 21 0 0 0 chr13 112231573 112231594 -8052718 + AT_rich Low_complexity Low_complexity 1 21 0 4 1441 191 315 99 22 chr13 112231993 112232084 -8052228 + L4 LINE RTE 1350 1447 -582 4 1441 227 88 29 0 chr13 112232664 112232698 -8051614 + tRNA-Glu-GAG tRNA tRNA 3 37 -38 4 1441 247 349 18 35 chr13 112233306 112233419 -8050893 + PB1D10 SINE Alu 1 111 -6 4 1441 1355 81 38 0 chr13 112233853 112234039 -8050273 + B2_Mm2 SINE B2 1 193 -2 4 1441 453 200 0 83 chr13 112234203 112234310 -8050002 + PB1D9 SINE Alu 9 107 -13 4 1441 255 31 0 0 chr13 112234310 112234342 -8049970 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 4 1441 453 200 0 83 chr13 112234342 112234354 -8049958 + PB1D9 SINE Alu 108 117 -3 4 1441 548 331 12 12 chr13 112234451 112234613 -8049699 + RSINE1 SINE B4 2 163 -2 4 1441 679 310 92 20 chr13 112234652 112234902 -8049410 + B4A SINE B4 3 270 -22 4 1441 282 339 97 30 chr13 112235690 112235824 -8048488 - MIR SINE MIR -112 150 8 4 1441 28 29 0 0 chr13 112235990 112236025 -8048287 + AT_rich Low_complexity Low_complexity 1 35 0 4 1441 241 328 0 0 chr13 112236495 112236556 -8047756 - B4 SINE B4 -153 139 79 4 1441 325 307 13 0 chr13 112239452 112239527 -8044785 + ID4_ SINE ID 6 81 -2 4 1441 361 198 104 0 chr13 112239769 112239865 -8044447 + B1F SINE Alu 42 147 -2 4 1441 576 129 21 31 chr13 112240510 112240606 -8043706 - B1_Mur1 SINE Alu -10 139 45 4 1441 23 0 0 0 chr13 112240690 112240713 -8043599 + AT_rich Low_complexity Low_complexity 1 23 0 4 1441 271 254 0 43 chr13 112241123 112241193 -8043119 - tRNA-Ala-GCY_ tRNA tRNA -3 72 6 4 1441 269 282 0 82 chr13 112241193 112241204 -8043108 - ID4_ SINE ID -1 78 5 4 1441 29 28 0 0 chr13 112241329 112241365 -8042947 + AT_rich Low_complexity Low_complexity 1 36 0 4 1441 342 0 0 0 chr13 112241467 112241505 -8042807 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 1441 226 278 46 102 chr13 112241506 112241614 -8042698 + MT2B2 LTR ERVL 137 238 -346 4 1441 332 271 88 53 chr13 112241533 112241549 -8042763 + B1F1 SINE Alu 1 47 -70 4 1441 414 211 40 0 chr13 112241549 112241625 -8042687 + ID_B1 SINE B4 94 172 -52 4 1441 332 271 88 53 chr13 112241625 112241646 -8042666 + B1F1 SINE Alu 48 117 0 4 1441 1348 96 37 0 chr13 112241829 112242016 -8042296 + B2_Mm2 SINE B2 2 195 0 4 1441 290 327 93 110 chr13 112242388 112242414 -8041898 + B4 SINE B4 62 155 -137 4 1441 602 206 104 30 chr13 112242414 112242549 -8041763 + B1_Mur2 SINE Alu 2 146 -3 4 1441 290 327 93 110 chr13 112242549 112242570 -8041742 + B4 SINE B4 156 240 -52 4 1441 351 197 0 0 chr13 112242838 112242899 -8041413 + B1_Mur1 SINE Alu 78 138 -11 4 1441 755 128 120 0 chr13 112244078 112244211 -8040101 + B1_Mur3 SINE Alu 1 149 0 4 1441 235 235 0 19 chr13 112244525 112244577 -8039735 + CT-rich Low_complexity Low_complexity 4 54 0 4 1441 226 353 35 0 chr13 112244578 112244663 -8039649 - B1F2 SINE Alu -6 143 56 4 1441 448 261 17 43 chr13 112245256 112245372 -8038940 - ID_B1 SINE B4 -109 115 3 4 1441 505 238 61 69 chr13 112245549 112245680 -8038632 + B3 SINE B2 1 130 -86 4 1441 480 35 0 0 chr13 112245705 112245763 -8038549 + (GA)n Simple_repeat Simple_repeat 1 58 0 4 1441 339 191 66 22 chr13 112245790 112245881 -8038431 + PB1D10 SINE Alu 21 115 -2 4 1441 410 322 144 45 chr13 112245923 112246297 -8038015 - Lx8 LINE L1 -38 7435 7025 4 1441 221 344 82 10 chr13 112246314 112246411 -8037901 - PB1D7 SINE Alu -16 104 1 4 1441 293 214 119 101 chr13 112246440 112246549 -8037763 - B1_Mur2 SINE Alu -9 140 30 4 1441 241 385 0 10 chr13 112246784 112246881 -8037431 + LTR40c LTR ERVL 4 99 -366 4 1441 697 95 52 213 chr13 112247009 112247183 -8037129 - B1_Mus1 SINE Alu 0 148 3 4 1441 2390 41 0 0 chr13 112247711 112248038 -8036274 - L1Md_A LINE L1 0 6582 6292 4 1441 722 196 8 8 chr13 112248038 112248172 -8036140 - B1_Mur4 SINE Alu -15 135 2 4 1441 1490 42 0 77 chr13 112248527 112248734 -8035578 + B2_Mm1a SINE B2 1 191 -2 4 1441 248 263 62 50 chr13 112248742 112248822 -8035490 + ID4 SINE ID 2 82 -1 4 1441 1425 75 5 0 chr13 112248944 112249131 -8035181 + B2_Mm1a SINE B2 2 189 -4 4 1441 1294 92 35 0 chr13 112249211 112249385 -8034927 + B2_Mm2 SINE B2 2 181 -14 4 1441 435 186 252 8 chr13 112249749 112249868 -8034444 - B1_Mur3 SINE Alu 0 149 2 4 1441 273 286 54 0 chr13 112249996 112250108 -8034204 + L1_Mur2 LINE L1 2613 2730 -3147 4 1441 462 282 142 34 chr13 112250153 112250329 -8033983 + ID_B1 SINE B4 1 195 -29 4 1441 234 304 41 164 chr13 112250640 112250762 -8033550 + B1F1 SINE Alu 43 149 0 4 1441 586 214 138 41 chr13 112251098 112251293 -8033019 - B4 SINE B4 -77 215 2 4 1441 579 273 27 40 chr13 112251311 112251460 -8032852 - B1_Mur1 SINE Alu -2 147 1 4 1441 384 253 0 37 chr13 112251514 112251596 -8032716 + B3 SINE B2 133 211 -5 4 1441 632 103 169 8 chr13 112252326 112252444 -8031868 + URR1B DNA MER1_type 89 225 0 4 1441 260 328 8 49 chr13 112252575 112252697 -8031615 + ID_B1 SINE B4 108 224 0 4 1441 380 374 31 6 chr13 112252674 112252833 -8031479 + ID_B1 SINE B4 58 220 -4 4 1441 307 179 0 67 chr13 112253352 112253412 -8030900 + B1F2 SINE Alu 5 60 -89 4 1441 1094 93 134 0 chr13 112253462 112253634 -8030678 + B2_Mm2 SINE B2 1 195 0 4 1441 593 131 84 91 chr13 112253656 112253799 -8030513 + B1_Mm SINE Alu 1 142 -5 5 1441 583 194 60 80 chr13 112253809 112253960 -8030352 + B1_Mur3 SINE Alu 2 149 0 5 1441 994 117 0 14 chr13 112253972 112254120 -8030192 + B1_Mm SINE Alu 2 147 0 5 1441 999 80 80 0 chr13 112254464 112254601 -8029711 - B1_Mus1 SINE Alu 0 148 1 5 1441 286 323 20 29 chr13 112255006 112255108 -8029204 + MER21B LTR ERV1 11 111 -752 5 1441 261 284 36 18 chr13 112255803 112255914 -8028398 - L1M4b LINE L1 -7133 201 89 5 1441 490 308 35 7 chr13 112256017 112256161 -8028151 + L1M4b LINE L1 389 536 -6798 5 1441 1258 184 113 19 chr13 112256264 112256574 -8027738 + L1M4b LINE L1 854 1192 -6142 5 1441 348 184 84 33 chr13 112257265 112257362 -8026950 + B1_Mur2 SINE Alu 2 143 -6 5 1441 349 211 0 14 chr13 112257426 112257498 -8026814 + MER57-int LTR ERV1 7161 7231 -306 5 1441 589 178 19 151 chr13 112257514 112257673 -8026639 + B1_Mur3 SINE Alu 11 148 -1 5 1441 676 144 114 0 chr13 112258078 112258210 -8026102 + B1_Mus2 SINE Alu 1 147 0 5 1441 374 272 117 78 chr13 112258221 112258504 -8025808 + L1M3 LINE L1 5524 5817 -363 5 1441 318 194 109 101 chr13 112258521 112258659 -8025653 + MT2B LTR ERVL 140 278 -323 5 1441 593 180 40 32 chr13 112258557 112258683 -8025629 + B1_Mus1 SINE Alu 21 147 -1 5 1441 407 130 13 0 chr13 112258684 112258761 -8025551 + (TA)n Simple_repeat Simple_repeat 1 78 0 5 1441 180 0 0 0 chr13 112258805 112258825 -8025487 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1441 561 154 248 0 chr13 112258864 112258981 -8025331 + B2_Mm2 SINE B2 2 147 -48 5 1441 234 0 0 0 chr13 112259459 112259485 -8024827 + (TA)n Simple_repeat Simple_repeat 1 26 0 5 1441 250 167 0 77 chr13 112259730 112259782 -8024530 + RSINE1 SINE B4 4 51 -114 5 1441 1519 37 11 5 chr13 112259890 112260079 -8024233 + B2_Mm1t SINE B2 1 190 -3 5 1441 1237 119 6 0 chr13 112260089 112260266 -8024046 + B2_Mm1t SINE B2 2 179 -14 5 1441 352 91 0 18 chr13 112260313 112260369 -8023943 + B2_Mm2 SINE B2 47 101 -94 5 1441 30 27 0 0 chr13 112260392 112260429 -8023883 + AT_rich Low_complexity Low_complexity 1 37 0 5 1441 189 0 0 0 chr13 112260909 112260930 -8023382 + (A)n Simple_repeat Simple_repeat 1 21 0 5 1441 645 194 48 41 chr13 112261557 112261702 -8022610 + B1_Mus1 SINE Alu 1 146 -2 5 1441 310 281 202 8 chr13 112261702 112261831 -8022481 + B3 SINE B2 29 182 -34 5 1441 200 42 0 0 chr13 112261858 112261882 -8022430 + (TA)n Simple_repeat Simple_repeat 2 25 0 5 1441 897 186 4 0 chr13 112261882 112262160 -8022152 + (CA)n Simple_repeat Simple_repeat 1 279 0 5 1441 283 299 73 27 chr13 112262160 112262270 -8022042 + ID_B1 SINE B4 97 211 -13 5 1441 1102 142 11 0 chr13 112262372 112262548 -8021764 + B2_Mm1t SINE B2 2 179 -14 5 1441 317 86 391 45 chr13 112262570 112262680 -8021632 + B2_Mm2 SINE B2 47 194 -1 5 1441 468 258 111 25 chr13 112263299 112263498 -8020814 - ID_B1 SINE B4 -8 216 1 5 1441 390 277 9 4 chr13 112263982 112264092 -8020220 + B1F SINE Alu 7 115 -34 5 1441 424 294 28 0 chr13 112264104 112264213 -8020099 + ID_B1 SINE B4 79 190 -34 5 1441 929 97 194 0 chr13 112264490 112264645 -8019667 - B2_Mm1t SINE B2 -7 186 2 5 1441 281 293 105 13 chr13 112265228 112265304 -8019008 - RSINE1 SINE B4 -72 93 11 5 1441 501 183 141 67 chr13 112265887 112266022 -8018290 + B1_Mus2 SINE Alu 2 146 -1 5 1441 247 281 0 0 chr13 112266154 112266211 -8018101 + B4 SINE B4 27 83 -209 5 1441 820 102 39 8 chr13 112266414 112266543 -8017769 + B2_Mm1t SINE B2 1 133 -60 5 1441 1171 55 0 7 chr13 112266568 112266716 -8017596 + B1_Mus2 SINE Alu 1 147 0 5 1441 1128 172 49 0 chr13 112267385 112267588 -8016724 + URR1A DNA MER1_type 13 225 -1 5 1441 1243 60 41 52 chr13 112267616 112267770 -8016542 + B2_Mm2 SINE B2 2 151 -44 5 1441 246 81 0 0 chr13 112267770 112267807 -8016505 + (TAA)n Simple_repeat Simple_repeat 3 39 0 5 1441 1243 60 41 52 chr13 112267807 112267846 -8016466 + B2_Mm2 SINE B2 152 193 -2 5 1441 392 262 153 12 chr13 112268006 112268174 -8016138 - B3A SINE B2 -28 188 1 5 1441 213 231 0 0 chr13 112268520 112268559 -8015753 + ID4_ SINE ID 3 41 -42 5 1441 365 281 180 8 chr13 112268729 112268851 -8015461 + B1F SINE Alu 2 144 -5 5 1441 322 266 186 0 chr13 112269158 112269271 -8015041 - B1_Mur3 SINE Alu -7 142 9 5 1441 535 294 65 112 chr13 112269280 112269540 -8014772 + RCHARR1 DNA MER1_type 3 250 -724 5 1441 681 75 274 0 chr13 112269768 112269874 -8014438 + B1_Mus1 SINE Alu 1 135 -13 5 1441 528 16 0 0 chr13 112270073 112270134 -8014178 + (GAAAA)n Simple_repeat Simple_repeat 5 65 0 5 1441 290 274 109 31 chr13 112270246 112270374 -8013938 - B1F SINE Alu -5 144 7 5 1441 276 143 0 0 chr13 112270411 112270453 -8013859 + RCHARR1 DNA MER1_type 563 604 -370 5 1441 436 169 108 0 chr13 112270454 112270537 -8013775 + RMER1C Other Other 850 941 -401 5 1441 305 210 69 84 chr13 112270578 112270753 -8013559 - B3A SINE B2 -15 178 1 5 1441 716 140 21 46 chr13 112270901 112271046 -8013266 + B1_Mus2 SINE Alu 2 150 0 5 1441 343 279 35 11 chr13 112271075 112271162 -8013150 + B1F2 SINE Alu 1 89 -60 5 1441 443 294 162 51 chr13 112271312 112271645 -8012667 + MTEa LTR MaLR 4 373 -6 5 1441 276 307 104 88 chr13 112271716 112271841 -8012471 + ID_B1 SINE B4 53 179 -45 5 1441 279 216 19 30 chr13 112271844 112271978 -8012334 - B2_Mm2 SINE B2 -5 190 14 5 1441 854 119 81 24 chr13 112271977 112272140 -8012172 - B2_Mm1t SINE B2 -14 179 14 5 1441 304 283 35 17 chr13 112272165 112272280 -8012032 + GA-rich Low_complexity Low_complexity 1 117 0 5 1441 435 200 0 0 chr13 112272507 112272577 -8011735 + B3A SINE B2 11 80 -118 5 1441 344 278 102 40 chr13 112272747 112272923 -8011389 + MIR SINE MIR 76 262 0 5 1441 421 315 9 18 chr13 112272937 112273047 -8011265 + PB1D10 SINE Alu 2 110 -7 5 1441 444 280 0 11 chr13 112273089 112273183 -8011129 + PB1D10 SINE Alu 2 94 -23 5 1441 718 168 142 17 chr13 112273360 112273536 -8010776 + B3A SINE B2 1 198 0 5 1441 342 224 81 23 chr13 112273554 112273641 -8010671 + PB1D9 SINE Alu 22 113 -7 5 1441 591 234 0 92 chr13 112273658 112273799 -8010513 + B3 SINE B2 7 134 -82 5 1441 472 98 234 21 chr13 112274123 112274217 -8010095 - B2_Mm2 SINE B2 -23 172 59 5 1441 300 344 30 30 chr13 112274449 112274614 -8009698 + RSINE1 SINE B4 1 165 0 5 1441 704 245 14 0 chr13 112276142 112276281 -8008031 + B3A SINE B2 3 143 -55 5 1441 1414 84 16 0 chr13 112276512 112276702 -8007610 + B2_Mm2 SINE B2 1 193 -2 5 1441 1238 34 0 0 chr13 112276810 112276957 -8007355 - B1_Mus2 SINE Alu 0 147 1 5 1441 189 0 0 0 chr13 112277283 112277304 -8007008 + (TC)n Simple_repeat Simple_repeat 2 22 0 5 1441 330 26 0 0 chr13 112277304 112277342 -8006970 + (TA)n Simple_repeat Simple_repeat 2 40 0 5 1441 206 150 16 62 chr13 112279096 112279160 -8005152 + (CGGG)n Simple_repeat Simple_repeat 3 63 0 5 1441 289 231 16 32 chr13 112279588 112279713 -8004599 + (CCG)n Simple_repeat Simple_repeat 1 123 0 5 1441 204 40 0 0 chr13 112279732 112279757 -8004555 + (GGGA)n Simple_repeat Simple_repeat 2 26 0 5 1441 22 80 0 0 chr13 112279758 112279808 -8004504 + GC_rich Low_complexity Low_complexity 1 50 0 5 1441 223 340 11 0 chr13 112280109 112280203 -8004109 + G-rich Low_complexity Low_complexity 3 97 0 5 1441 313 252 17 17 chr13 112280326 112280443 -8003869 + G-rich Low_complexity Low_complexity 3 119 0 5 1441 339 328 107 0 chr13 112281513 112281635 -8002677 - ID_B1 SINE B4 -12 212 78 5 1441 239 192 0 71 chr13 112281714 112281770 -8002542 - B1F SINE Alu -2 147 96 5 1441 349 227 89 12 chr13 112281961 112282074 -8002238 + B1_Mur2 SINE Alu 3 140 -9 5 1441 749 128 40 8 chr13 112282247 112282373 -8001939 - B1_Mur4 SINE Alu -9 141 12 5 1441 339 254 14 116 chr13 112282283 112282421 -8001891 - MT2B LTR ERVL -344 257 134 5 1441 476 157 250 42 chr13 112283784 112283800 -8000512 - B1_Mur4 SINE Alu 0 150 139 5 1441 851 0 0 10 chr13 112283800 112283900 -8000412 + (CTTTG)n Simple_repeat Simple_repeat 1 99 0 5 1441 476 157 250 42 chr13 112283900 112284003 -8000309 - B1_Mur4 SINE Alu -12 138 6 5 1441 254 278 53 53 chr13 112283924 112284019 -8000293 - MT2B LTR ERVL -353 248 154 5 1441 27 62 0 0 chr13 112284188 112284236 -8000076 + AT_rich Low_complexity Low_complexity 1 48 0 5 1441 453 245 112 9 chr13 112284241 112284348 -7999964 + RSINE1 SINE B4 6 123 -42 5 1441 258 32 0 0 chr13 112284368 112284399 -7999913 + (CA)n Simple_repeat Simple_repeat 1 31 0 5 1441 1111 96 0 0 chr13 112284501 112284647 -7999665 + B1_Mm SINE Alu 2 147 0 5 1441 216 0 0 0 chr13 112284647 112284671 -7999641 + (A)n Simple_repeat Simple_repeat 1 24 0 5 1441 255 200 18 35 chr13 112284795 112284852 -7999460 - B3A SINE B2 -142 56 1 5 1441 196 341 150 8 chr13 112284854 112284987 -7999325 + L2b LINE L2 3221 3372 -3 5 1441 364 283 0 89 chr13 112284996 112285097 -7999215 + MTEa LTR MaLR 1 92 -287 5 1441 428 213 54 27 chr13 112285620 112285731 -7998581 - PB1D9 SINE Alu -6 114 1 5 1441 351 304 54 0 chr13 112285805 112285897 -7998415 - PB1D10 SINE Alu -7 110 14 5 1441 181 268 141 0 chr13 112286243 112286314 -7997998 + L2b LINE L2 3345 3425 -1 5 1441 721 248 80 10 chr13 112286484 112286684 -7997628 + B3 SINE B2 3 216 0 5 1441 1016 226 63 21 chr13 112286775 112287060 -7997252 - Lx8 LINE L1 -3 7470 7174 5 1441 333 225 14 14 chr13 112287092 112287164 -7997148 + ID4 SINE ID 2 73 -10 6 1441 1138 69 0 7 chr13 112287214 112287360 -7996952 + B1_Mm SINE Alu 1 145 -2 6 1441 216 97 0 0 chr13 112287438 112287469 -7996843 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1441 1207 119 23 0 chr13 112287592 112287768 -7996544 + B2_Mm2 SINE B2 2 181 -14 6 1441 439 73 0 5 chr13 112287796 112287861 -7996451 + B2_Mm2 SINE B2 47 109 -107 6 1441 2570 117 269 35 chr13 112288459 112288945 -7995367 - MT2B LTR ERVL 0 601 2 6 1441 232 219 45 45 chr13 112288984 112289051 -7995261 - ORR1A3-int LTR MaLR -1323 640 574 6 1441 3876 137 2 44 chr13 112289099 112289176 -7995136 - MERVL_2A-int LTR ERVL -289 5472 5398 6 1441 1306 20 0 0 chr13 112289176 112289323 -7994989 - B1_Mm SINE Alu 0 147 1 6 1441 3876 137 2 44 chr13 112289323 112289862 -7994450 - MERVL_2A-int LTR ERVL -364 5397 4882 6 1441 3199 8 0 78 chr13 112289862 112290260 -7994052 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1441 1038 92 159 0 chr13 112290260 112290423 -7993889 + IAPEz-int LTR ERVK 8 196 -6285 6 1441 16424 44 40 9 chr13 112290394 112292459 -7991853 + IAPEz-int LTR ERVK 67 2142 -4339 6 1441 36338 16 1 2 chr13 112292437 112296434 -7987878 + IAPEz-int LTR ERVK 2480 6481 0 6 1441 3199 8 0 78 chr13 112296444 112296842 -7987470 + IAPLTR1_Mm LTR ERVK 1 367 0 6 1441 1971 142 3 17 chr13 112296842 112297124 -7987188 - MERVL_2A-int LTR ERVL -874 4887 4605 6 1441 1209 48 0 7 chr13 112297135 112297283 -7987029 - B1_Mus1 SINE Alu 0 148 2 6 1441 524 284 34 85 chr13 112297310 112297354 -7986958 + B4 SINE B4 56 220 -69 6 1441 960 115 0 0 chr13 112297354 112297484 -7986828 + B1_Mm SINE Alu 12 141 -6 6 1441 687 136 29 0 chr13 112297512 112297615 -7986697 - MERVL_2A-int LTR ERVL -1226 4535 4430 6 1441 3099 108 21 21 chr13 112297615 112298096 -7986216 + RLTR19B LTR ERVK 1 481 -234 6 1441 347 102 0 0 chr13 112298068 112298117 -7986195 - ORR1A3-int LTR MaLR -1242 721 673 6 1441 335 176 206 0 chr13 112298117 112298136 -7986176 - MT2B LTR ERVL -444 157 76 6 1441 1182 85 91 0 chr13 112298137 112298302 -7986010 + B2_Mm2 SINE B2 2 181 -14 6 1441 21 0 0 0 chr13 112298322 112298343 -7985969 + AT_rich Low_complexity Low_complexity 1 21 0 6 1441 842 108 8 24 chr13 112298344 112298467 -7985845 - MT2B LTR ERVL -480 121 1 6 1441 410 209 108 9 chr13 112298372 112298483 -7985829 - ORR1A3-int LTR MaLR -1258 705 584 6 1441 768 224 0 75 chr13 112298486 112298698 -7985614 - B3A SINE B2 0 198 3 6 1441 867 109 93 21 chr13 112298854 112298994 -7985318 + B1_Mur4 SINE Alu 1 150 0 6 1441 325 301 55 83 chr13 112299076 112299110 -7985202 - RSINE1 SINE B4 -20 145 110 6 1441 1318 118 11 0 chr13 112299110 112299296 -7985016 + B2_Mm1t SINE B2 5 192 -1 6 1441 325 301 55 83 chr13 112299296 112299406 -7984906 - RSINE1 SINE B4 -56 109 5 6 1441 316 289 11 0 chr13 112299493 112299583 -7984729 - B3A SINE B2 -105 93 3 6 1441 655 288 52 41 chr13 112299648 112300014 -7984298 - L1MA5 LINE L1 -339 5961 5592 6 1441 225 133 67 0 chr13 112300014 112300074 -7984238 + T-rich Low_complexity Low_complexity 2 65 0 6 1441 771 249 44 39 chr13 112300268 112300473 -7983839 + B3 SINE B2 1 206 -10 6 1441 1456 71 27 0 chr13 112300605 112300788 -7983524 - B2_Mm2 SINE B2 -6 189 2 6 1441 509 252 0 0 chr13 112301438 112301549 -7982763 - PB1D10 SINE Alu -6 111 1 6 1441 554 168 240 34 chr13 112301554 112301733 -7982579 - B3 SINE B2 0 216 1 6 1441 520 300 13 26 chr13 112301742 112301767 -7982545 + ID_B1 SINE B4 65 216 -8 6 1441 696 188 31 8 chr13 112301767 112301896 -7982416 + B1_Mur2 SINE Alu 10 141 -8 6 1441 513 65 21 31 chr13 112301905 112302001 -7982311 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 6 1441 448 177 0 213 chr13 112302040 112302162 -7982150 - B3A SINE B2 -91 107 12 6 1441 252 162 70 42 chr13 112302172 112302243 -7982069 - L1MA5 LINE L1 -827 5485 5413 6 1441 506 119 0 12 chr13 112302243 112302328 -7981984 + (TTCC)n Simple_repeat Simple_repeat 3 86 0 6 1441 529 216 0 65 chr13 112302346 112302470 -7981842 - B1F2 SINE Alu -27 122 7 6 1441 570 15 0 0 chr13 112302472 112302539 -7981773 + (TC)n Simple_repeat Simple_repeat 2 68 0 6 1441 355 290 101 40 chr13 112302681 112302939 -7981373 + MTEb LTR MaLR 137 398 -23 6 1441 431 289 21 32 chr13 112302968 112303154 -7981158 - L1MA5 LINE L1 -978 5165 4982 6 1441 738 168 46 0 chr13 112303156 112303287 -7981025 + B1_Mur3 SINE Alu 9 145 -4 6 1441 341 179 81 35 chr13 112303287 112303374 -7980938 - L1MA5 LINE L1 -1149 4994 4904 6 1441 743 274 177 9 chr13 112303444 112303676 -7980636 - B4A SINE B4 -14 278 8 6 1441 475 269 76 6 chr13 112303692 112303849 -7980463 - L1MA5 LINE L1 -1225 4918 4751 6 1441 485 194 101 10 chr13 112303881 112303980 -7980332 - RSINE1 SINE B4 -28 137 30 6 1441 558 96 29 0 chr13 112304050 112304154 -7980158 + (TG)n Simple_repeat Simple_repeat 2 108 0 6 1441 3557 23 0 0 chr13 112304154 112304547 -7979765 + MTA_Mm LTR MaLR 4 396 0 6 1441 9201 37 4 4 chr13 112304547 112305645 -7978667 + MTA_Mm-int LTR MaLR 1 1098 0 6 1441 3585 23 0 0 chr13 112305645 112306041 -7978271 + MTA_Mm LTR MaLR 1 396 0 6 1441 844 173 0 11 chr13 112306048 112306229 -7978083 + (TG)n Simple_repeat Simple_repeat 2 180 0 6 1441 239 255 0 0 chr13 112306236 112306283 -7978029 - tRNA-Ala-GCA tRNA tRNA -8 67 21 6 1441 388 259 53 9 chr13 112306424 112306537 -7977775 - PB1D9 SINE Alu 0 120 3 6 1441 417 20 0 0 chr13 112306614 112306664 -7977648 + (TG)n Simple_repeat Simple_repeat 2 51 0 6 1441 512 282 19 32 chr13 112306696 112306850 -7977462 + RSINE1 SINE B4 8 159 -6 6 1441 292 181 110 14 chr13 112306871 112306944 -7977368 - L1MA5 LINE L1 -1546 4597 4518 6 1441 300 307 9 56 chr13 112306991 112307098 -7977214 - L1MA5 LINE L1 -1638 4505 4404 6 1441 200 149 21 0 chr13 112307305 112307352 -7976960 + CT-rich Low_complexity Low_complexity 1 48 0 6 1441 683 146 67 37 chr13 112307371 112307506 -7976806 - B1_Mur4 SINE Alu -1 149 11 6 1441 566 232 14 14 chr13 112307678 112307822 -7976490 - B1F SINE Alu -5 144 1 6 1441 848 100 92 0 chr13 112308109 112308239 -7976073 - B2_Mm2 SINE B2 -52 143 2 6 1441 203 288 165 76 chr13 112308452 112308531 -7975781 + L2a LINE L2 3336 3421 -5 6 1441 206 286 117 0 chr13 112308865 112308942 -7975370 - L2 LINE L2 -648 2771 2686 6 1441 315 0 0 0 chr13 112308983 112309018 -7975294 + (TC)n Simple_repeat Simple_repeat 2 36 0 6 1441 471 18 0 0 chr13 112309105 112309161 -7975151 + (TG)n Simple_repeat Simple_repeat 2 57 0 6 1441 421 277 0 10 chr13 112309600 112309702 -7974610 + ID_B1 SINE B4 116 216 -8 6 1441 352 260 14 0 chr13 112309748 112309821 -7974491 + B1_Mur1 SINE Alu 55 128 -21 6 1441 335 197 25 38 chr13 112309856 112309935 -7974377 + B4 SINE B4 2 79 -213 6 1441 226 146 24 0 chr13 112309927 112309968 -7974344 - ORR1B1 LTR MaLR -351 43 2 6 1441 519 112 0 0 chr13 112310164 112310244 -7974068 + (TCTA)n Simple_repeat Simple_repeat 1 80 0 6 1441 728 136 66 29 chr13 112310245 112310381 -7973931 - B1_Mus1 SINE Alu -6 142 2 6 1441 348 235 46 23 chr13 112310566 112310653 -7973659 + RSINE1 SINE B4 44 132 -33 6 1441 1166 68 0 0 chr13 112311381 112311528 -7972784 + B1_Mm SINE Alu 1 147 0 6 1441 302 152 17 0 chr13 112311583 112311642 -7972670 + CT-rich Low_complexity Low_complexity 1 60 0 6 1441 268 259 0 0 chr13 112311649 112311703 -7972609 - tRNA-Ala-GCA tRNA tRNA -18 57 4 6 1441 257 220 0 106 chr13 112311703 112311715 -7972597 - ID4 SINE ID -20 63 5 6 1441 339 267 104 33 chr13 112311803 112311985 -7972327 - B3A SINE B2 -1 197 3 6 1441 546 108 0 0 chr13 112312016 112312099 -7972213 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 6 1441 1071 82 14 0 chr13 112312118 112312264 -7972048 - B1_Mur4 SINE Alu 0 150 3 6 1441 190 0 67 0 chr13 112312525 112312555 -7971757 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 6 1441 237 308 114 15 chr13 112312633 112312765 -7971547 + MLT1K LTR MaLR 443 587 -8 6 1441 205 51 0 49 chr13 112313336 112313377 -7970935 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 6 1441 846 277 100 100 chr13 112313569 112313918 -7970394 + ORR1E LTR MaLR 11 359 0 6 1441 1181 28 35 0 chr13 112313929 112314070 -7970242 + B1_Mm SINE Alu 2 147 0 6 1441 232 280 91 27 chr13 112314531 112314641 -7969671 - PB1D10 SINE Alu 0 117 1 6 1441 234 302 32 0 chr13 112314788 112314851 -7969461 + C-rich Low_complexity Low_complexity 3 67 0 6 1441 818 126 21 49 chr13 112314955 112315097 -7969215 + B1_Mur3 SINE Alu 11 148 -1 6 1441 448 289 102 78 chr13 112315407 112315613 -7968699 + ID_B1 SINE B4 8 218 -6 6 1441 436 262 9 19 chr13 112315682 112315787 -7968525 - PB1D10 SINE Alu -13 104 1 6 1441 335 298 160 84 chr13 112315910 112316185 -7968127 - MER20B DNA MER1_type -203 580 285 6 1441 416 320 76 19 chr13 112316361 112316571 -7967741 + B4 SINE B4 1 222 -70 6 1441 864 156 0 21 chr13 112316446 112316590 -7967722 + B1_Mur4 SINE Alu 10 150 0 6 1441 324 148 0 0 chr13 112316601 112316662 -7967650 + (A)n Simple_repeat Simple_repeat 1 61 0 6 1441 369 247 53 21 chr13 112316812 112316907 -7967405 + B1F1 SINE Alu 9 106 -43 6 1441 342 45 0 0 chr13 112316968 112317012 -7967300 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1441 762 168 32 0 chr13 112317127 112317252 -7967060 - B1_Mur2 SINE Alu -1 148 20 6 1441 420 317 89 0 chr13 112317287 112317410 -7966902 - ID_B1 SINE B4 0 224 91 6 1441 592 261 0 7 chr13 112317642 112317781 -7966531 - B1F2 SINE Alu -6 143 6 6 1441 243 0 0 0 chr13 112318063 112318090 -7966222 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1441 412 311 152 14 chr13 112318240 112318517 -7965795 + MTEb LTR MaLR 1 315 -64 6 1441 242 204 0 0 chr13 112318887 112318931 -7965381 - B4 SINE B4 -26 266 223 6 1441 637 241 0 0 chr13 112318927 112319043 -7965269 + B3 SINE B2 101 216 0 6 1441 23 54 0 0 chr13 112319073 112319110 -7965202 + AT_rich Low_complexity Low_complexity 1 37 0 6 1441 680 292 18 0 chr13 112319143 112319314 -7964998 - B3A SINE B2 0 198 25 6 1441 248 312 26 18 chr13 112319333 112319447 -7964865 - RCHARR1 DNA MER1_type -203 771 657 6 1441 530 214 155 75 chr13 112319490 112319677 -7964635 - B3 SINE B2 -13 203 2 6 1441 727 192 34 0 chr13 112319690 112319836 -7964476 - RCHARR1 DNA MER1_type -306 668 518 6 1441 180 111 0 0 chr13 112319847 112319874 -7964438 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 6 1441 435 19 0 0 chr13 112319959 112320011 -7964301 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1441 1139 117 0 6 chr13 112320103 112320284 -7964028 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 7 1441 709 316 34 17 chr13 112320302 112320537 -7963775 - B4A SINE B4 -48 244 6 7 1441 730 287 29 25 chr13 112320850 112321125 -7963187 - L1_Rod LINE L1 -13 5834 5559 7 1441 532 0 29 0 chr13 112321126 112321194 -7963118 + (TTCC)n Simple_repeat Simple_repeat 3 72 0 7 1441 432 129 71 0 chr13 112321199 112321269 -7963043 - B1_Mus2 SINE Alu 0 147 73 7 1441 562 226 97 0 chr13 112321255 112321379 -7962933 - B3A SINE B2 -62 136 1 7 1441 393 219 0 0 chr13 112321410 112321483 -7962829 - B1_Mus1 SINE Alu -75 73 1 7 1441 2746 58 5 27 chr13 112321486 112321859 -7962453 - L1_Mus3 LINE L1 -73 6565 6201 7 1441 647 182 28 28 chr13 112322946 112323087 -7961225 + B1_Mur2 SINE Alu 4 144 -5 7 1441 252 0 0 0 chr13 112323091 112323119 -7961193 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 7 1441 276 77 0 0 chr13 112323159 112323198 -7961114 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 7 1441 232 286 94 63 chr13 112323402 112323529 -7960783 - B1F SINE Alu -1 148 18 7 1441 214 331 49 35 chr13 112323406 112323550 -7960762 - ID_B1 SINE B4 -1 223 78 7 1441 205 105 0 73 chr13 112323644 112323685 -7960627 + A-rich Low_complexity Low_complexity 4 41 0 7 1441 4581 55 7 12 chr13 112323744 112324311 -7960001 - LTRIS2 LTR ERV1 0 564 1 7 1441 279 0 0 0 chr13 112324779 112324810 -7959502 + (TG)n Simple_repeat Simple_repeat 1 31 0 7 1441 432 0 0 0 chr13 112324810 112324857 -7959455 + (GA)n Simple_repeat Simple_repeat 1 48 0 7 1441 1080 199 45 0 chr13 112324869 112325070 -7959242 + B3 SINE B2 7 216 0 7 1441 22 0 0 0 chr13 112325071 112325093 -7959219 + AT_rich Low_complexity Low_complexity 1 22 0 7 1441 282 56 0 0 chr13 112325101 112325137 -7959175 + (GGGAGA)n Simple_repeat Simple_repeat 1 36 0 7 1441 535 132 151 0 chr13 112325139 112325245 -7959067 + B3 SINE B2 95 216 0 7 1441 1387 46 114 0 chr13 112325745 112325763 -7958549 - B2_Mm2 SINE B2 0 195 178 7 1441 528 30 0 0 chr13 112325763 112325829 -7958483 + (TCTA)n Simple_repeat Simple_repeat 4 69 0 7 1441 1387 46 114 0 chr13 112325829 112325985 -7958327 - B2_Mm2 SINE B2 -18 177 2 7 1441 428 0 19 0 chr13 112326014 112326066 -7958246 + (TTTTG)n Simple_repeat Simple_repeat 2 54 0 7 1441 1106 72 0 0 chr13 112326066 112326204 -7958108 - B1_Mus1 SINE Alu -10 138 1 7 1441 330 102 20 0 chr13 112326221 112326270 -7958042 - B1_Mm SINE Alu -1 146 97 7 1441 183 42 0 0 chr13 112326270 112326294 -7958018 + (TC)n Simple_repeat Simple_repeat 2 25 0 7 1441 216 200 0 0 chr13 112326295 112326340 -7957972 + (CATATA)n Simple_repeat Simple_repeat 5 49 0 7 1441 728 216 84 17 chr13 112326364 112326543 -7957769 - B3A SINE B2 -6 192 2 7 1441 393 22 0 0 chr13 112326972 112327018 -7957294 + (TG)n Simple_repeat Simple_repeat 2 47 0 7 1441 293 304 0 0 chr13 112327268 112327337 -7956975 + ID4 SINE ID 9 77 -6 7 1441 1212 41 7 0 chr13 112327414 112327560 -7956752 - B1_Mus2 SINE Alu 0 147 1 7 1441 763 235 13 0 chr13 112327586 112327735 -7956577 + B3A SINE B2 9 159 -39 7 1441 466 281 92 46 chr13 112327866 112327939 -7956373 - RSINE1 SINE B4 -2 163 94 7 1441 1361 194 138 3 chr13 112327939 112328264 -7956048 - ORR1D1 LTR MaLR -3 371 3 7 1441 466 281 92 46 chr13 112328264 112328343 -7955969 - RSINE1 SINE B4 -72 93 4 7 1442 180 97 0 0 chr13 112328716 112328747 -7955565 + (T)n Simple_repeat Simple_repeat 1 31 0 7 1442 1244 47 0 7 chr13 112328747 112328896 -7955416 - B1_Mus1 SINE Alu 0 148 1 7 1442 201 176 0 0 chr13 112329059 112329093 -7955219 + (TAA)n Simple_repeat Simple_repeat 3 36 0 7 1442 1211 75 0 0 chr13 112329094 112329241 -7955071 + B1_Mm SINE Alu 1 147 0 7 1442 207 0 0 0 chr13 112329241 112329264 -7955048 + (A)n Simple_repeat Simple_repeat 1 23 0 7 1442 273 98 0 0 chr13 112329265 112329306 -7955006 + (TAA)n Simple_repeat Simple_repeat 3 43 0 7 1442 685 215 20 27 chr13 112329307 112329455 -7954857 + B1_Mus2 SINE Alu 1 147 0 7 1442 649 207 21 7 chr13 112329614 112329755 -7954557 - B1_Mus2 SINE Alu 0 147 5 7 1442 336 143 0 0 chr13 112330113 112330169 -7954143 + (T)n Simple_repeat Simple_repeat 1 56 0 7 1442 832 136 13 75 chr13 112330169 112330328 -7953984 - B1_Mur4 SINE Alu 0 150 2 7 1442 234 359 77 6 chr13 112330582 112330750 -7953562 + L1M5 LINE L1 5643 5822 -372 7 1442 441 0 0 0 chr13 112330751 112330800 -7953512 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1442 225 0 0 0 chr13 112330800 112330824 -7953488 + (GA)n Simple_repeat Simple_repeat 2 26 0 7 1442 459 286 0 0 chr13 112330966 112331078 -7953234 + ID_B1 SINE B4 105 216 -8 7 1442 344 229 143 0 chr13 112331162 112331267 -7953045 - RSINE1 SINE B4 0 165 46 7 1442 511 269 28 32 chr13 112331651 112331795 -7952517 + ID_B1 SINE B4 78 217 -7 7 1442 717 170 103 18 chr13 112331808 112331961 -7952351 + B3A SINE B2 7 165 -30 7 1442 207 69 0 0 chr13 112331961 112331990 -7952322 + (CA)n Simple_repeat Simple_repeat 1 29 0 7 1442 537 241 75 70 chr13 112331990 112332023 -7952289 + B2_Mm2 SINE B2 166 194 -1 7 1442 237 132 0 0 chr13 112332261 112332299 -7952013 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 7 1442 289 312 96 90 chr13 112332303 112332644 -7951668 + MLT1H LTR MaLR 152 475 -14 7 1442 379 289 26 33 chr13 112332654 112332845 -7951467 - MIRb SINE MIR -79 189 4 7 1442 832 135 14 0 chr13 112333074 112333222 -7951090 + (TTC)n Simple_repeat Simple_repeat 3 152 0 7 1442 387 0 0 0 chr13 112333220 112333263 -7951049 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 1442 733 217 7 14 chr13 112333263 112333408 -7950904 - B1_Mur4 SINE Alu -5 145 2 7 1442 611 213 76 30 chr13 112333409 112333540 -7950772 - B1_Mur1 SINE Alu -12 137 1 7 1442 234 0 0 0 chr13 112333553 112333579 -7950733 + (TCTG)n Simple_repeat Simple_repeat 4 29 0 7 1442 1071 79 0 0 chr13 112334208 112334347 -7949965 - B1_Mus1 SINE Alu -9 139 1 7 1442 270 296 120 63 chr13 112334371 112334562 -7949750 + B4A SINE B4 30 231 -61 7 1442 261 285 4 40 chr13 112334564 112334655 -7949657 + MTE2b LTR MaLR 28 117 -262 7 1442 387 89 0 0 chr13 112334746 112334802 -7949510 + (TC)n Simple_repeat Simple_repeat 1 56 0 7 1442 420 20 0 0 chr13 112334802 112334851 -7949461 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1442 1053 110 69 6 chr13 112334875 112335048 -7949264 + B2_Mm2 SINE B2 1 184 -11 7 1442 410 225 0 9 chr13 112335088 112335200 -7949112 + (TATATG)n Simple_repeat Simple_repeat 6 116 0 7 1442 853 226 158 50 chr13 112335343 112335646 -7948666 + Lx8 LINE L1 6883 7218 -255 7 1442 279 79 0 0 chr13 112336024 112336062 -7948250 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 7 1442 548 205 17 0 chr13 112336469 112336586 -7947726 - B1_Mur4 SINE Alu -23 127 9 7 1442 249 200 86 180 chr13 112336554 112336682 -7947630 - MT2B2 LTR ERVL -290 294 179 7 1442 221 325 88 0 chr13 112336614 112336694 -7947618 - B1F1 SINE Alu -61 88 2 7 1442 235 161 17 35 chr13 112336700 112336758 -7947554 - L1MB3 LINE L1 -2 6181 6125 7 1442 610 181 220 40 chr13 112336787 112336960 -7947352 - B3 SINE B2 -8 208 5 7 1442 667 261 35 58 chr13 112336973 112337144 -7947168 - ID_B1 SINE B4 -32 192 26 7 1442 374 103 528 27 chr13 112337148 112337239 -7947073 - B2_Mm2 SINE B2 -13 182 47 7 1442 951 116 155 0 chr13 112337275 112337430 -7946882 - B2_Mm1t SINE B2 -14 179 1 7 1442 246 105 0 0 chr13 112337695 112337733 -7946579 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 7 1442 1086 94 0 0 chr13 112337750 112337888 -7946424 - B1_Mus1 SINE Alu -10 138 1 7 1442 810 252 5 24 chr13 112337934 112338145 -7946167 + B3 SINE B2 1 207 -9 7 1442 738 241 85 5 chr13 112338326 112338526 -7945786 + B3 SINE B2 1 216 0 7 1442 455 290 111 43 chr13 112339049 112339160 -7945152 + B3 SINE B2 1 129 -87 7 1442 1428 187 75 55 chr13 112339160 112339562 -7944750 - RMER17C LTR ERVK 0 410 1 7 1442 455 290 111 43 chr13 112339562 112339612 -7944700 + B3 SINE B2 130 173 -43 7 1442 218 246 18 0 chr13 112339617 112339674 -7944638 + (TA)n Simple_repeat Simple_repeat 1 58 0 7 1442 1605 146 53 60 chr13 112339686 112339985 -7944327 + RLTR41 LTR ERV1 150 446 0 7 1442 25 0 0 0 chr13 112339987 112340012 -7944300 + AT_rich Low_complexity Low_complexity 1 25 0 7 1442 1695 145 70 58 chr13 112340084 112340429 -7943883 + ORR1B1 LTR MaLR 1 349 -45 7 1442 1170 79 79 0 chr13 112340430 112340595 -7943717 + B2_Mm1t SINE B2 2 179 -14 7 1442 394 122 0 5 chr13 112340608 112340674 -7943638 + B2_Mm2 SINE B2 47 110 -106 7 1442 342 61 0 0 chr13 112340698 112340747 -7943565 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 1442 336 102 61 0 chr13 112340747 112340796 -7943516 + ORR1B1 LTR MaLR 342 393 -1 7 1442 602 286 11 17 chr13 112340798 112340972 -7943340 - B3A SINE B2 -24 174 2 7 1442 431 287 7 65 chr13 112340991 112341129 -7943183 - RMER10B LTR ERVL 0 398 269 7 1442 951 9 0 0 chr13 112341568 112341676 -7942636 + (GAA)n Simple_repeat Simple_repeat 2 109 0 7 1442 216 0 0 0 chr13 112341676 112341700 -7942612 + (CAG)n Simple_repeat Simple_repeat 1 24 0 7 1442 397 286 1 17 chr13 112341703 112341828 -7942484 + PB1D7 SINE Alu 7 130 -20 7 1442 816 154 7 20 chr13 112341919 112342071 -7942241 + B1_Mur4 SINE Alu 1 150 0 7 1442 441 234 133 31 chr13 112342245 112342373 -7941939 + ID_B1 SINE B4 84 224 0 7 1442 269 0 0 53 chr13 112342427 112342465 -7941847 + (CACG)n Simple_repeat Simple_repeat 4 39 0 7 1442 574 188 155 8 chr13 112342561 112342690 -7941622 + B1_Mur4 SINE Alu 2 149 -1 7 1442 255 222 143 0 chr13 112342710 112342773 -7941539 + ID_B1 SINE B4 148 219 -5 8 1442 907 279 77 18 chr13 112342803 112343088 -7941224 + MLT1B LTR MaLR 40 341 -49 8 1442 252 130 0 0 chr13 112343311 112343357 -7940955 + (T)n Simple_repeat Simple_repeat 1 46 0 8 1442 732 41 30 10 chr13 112343358 112343457 -7940855 - B1_Mm SINE Alu 0 147 47 8 1442 279 207 0 49 chr13 112343406 112343467 -7940845 - RLTR25A LTR ERVK -531 572 515 8 1442 752 299 49 30 chr13 112343651 112343917 -7940395 + B4A SINE B4 1 271 -21 8 1442 192 77 0 0 chr13 112343920 112343946 -7940366 + (CG)n Simple_repeat Simple_repeat 2 27 0 8 1442 252 0 0 0 chr13 112343946 112343973 -7940339 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1442 907 239 5 36 chr13 112344134 112344355 -7939957 - B3 SINE B2 -2 214 1 8 1442 271 367 88 74 chr13 112344392 112344627 -7939685 - RMER5 LTR ERV1 -27 507 265 8 1442 647 225 186 6 chr13 112344627 112344810 -7939502 - B3 SINE B2 0 216 1 8 1442 271 367 88 74 chr13 112344810 112345004 -7939308 - RMER5 LTR ERV1 -270 264 72 8 1442 995 109 299 0 chr13 112345007 112345181 -7939131 + URR1A DNA MER1_type 1 226 0 8 1442 532 333 151 52 chr13 112345596 112346001 -7938311 + LTR16A LTR ERVL 2 446 -5 8 1442 868 173 0 11 chr13 112346363 112346544 -7937768 + CT-rich Low_complexity Low_complexity 1 179 0 8 1442 223 152 0 0 chr13 112346549 112346582 -7937730 + polypyrimidine Low_complexity Low_complexity 2 34 0 8 1442 282 56 0 0 chr13 112346834 112346870 -7937442 + (TC)n Simple_repeat Simple_repeat 2 37 0 8 1442 446 240 179 33 chr13 112346942 112347093 -7937219 - B3A SINE B2 -6 192 20 8 1442 254 288 30 15 chr13 112347210 112347277 -7937035 - B4A SINE B4 -148 144 77 8 1442 245 269 26 0 chr13 112347438 112347516 -7936796 + (TG)n Simple_repeat Simple_repeat 1 80 0 8 1442 716 250 98 28 chr13 112347529 112347743 -7936569 - B4A SINE B4 -22 270 42 8 1442 234 0 0 0 chr13 112347744 112347770 -7936542 + (CAA)n Simple_repeat Simple_repeat 3 28 0 8 1442 183 297 165 35 chr13 112347821 112347936 -7936376 + L2a LINE L2 3035 3164 -262 8 1442 357 273 90 15 chr13 112347969 112348103 -7936209 + B1F SINE Alu 3 146 -3 8 1442 1443 62 5 30 chr13 112348374 112348572 -7935740 - B2_Mm1a SINE B2 0 193 1 8 1442 641 277 0 14 chr13 112348576 112348719 -7935593 - ID_B1 SINE B4 0 224 84 8 1442 381 333 83 21 chr13 112348773 112348966 -7935346 - MLT1K LTR MaLR -343 252 48 8 1442 308 308 186 17 chr13 112349207 112349379 -7934933 + B3 SINE B2 3 203 -13 8 1442 215 347 91 75 chr13 112349720 112349907 -7934405 - MIRb SINE MIR -44 224 35 8 1442 1226 34 7 7 chr13 112349967 112350114 -7934198 + B1_Mm SINE Alu 1 147 0 8 1442 26 30 0 0 chr13 112350163 112350196 -7934116 + AT_rich Low_complexity Low_complexity 1 33 0 8 1442 454 292 162 0 chr13 112350487 112350641 -7933671 - B3 SINE B2 -11 205 27 8 1442 271 44 44 0 chr13 112350646 112350691 -7933621 + (TTG)n Simple_repeat Simple_repeat 2 48 0 8 1442 283 127 448 20 chr13 112350691 112350787 -7933525 - B2_Mm2 SINE B2 -12 183 47 8 1442 394 20 20 0 chr13 112350804 112350855 -7933457 - B2_Mm1t SINE B2 -14 179 128 8 1442 246 222 0 0 chr13 112351108 112351153 -7933159 - RMER15 LTR ERVL -108 467 423 8 1442 355 365 26 0 chr13 112351154 112351310 -7933002 - Lx8 LINE L1 -214 7259 7100 8 1442 1460 172 158 9 chr13 112351747 112352076 -7932236 - ORR1C1 LTR MaLR 0 378 1 8 1442 21 36 0 0 chr13 112352125 112352153 -7932159 + AT_rich Low_complexity Low_complexity 1 28 0 8 1442 697 233 0 14 chr13 112352168 112352316 -7931996 + ID_B1 SINE B4 79 224 0 8 1442 534 286 30 0 chr13 112352542 112352675 -7931637 + B1F2 SINE Alu 1 137 -12 8 1442 200 167 0 0 chr13 112352677 112352707 -7931605 + C-rich Low_complexity Low_complexity 1 30 0 8 1442 285 51 0 0 chr13 112352707 112352746 -7931566 + (TG)n Simple_repeat Simple_repeat 2 40 0 8 1442 213 239 0 80 chr13 112352774 112352824 -7931488 - B4 SINE B4 -164 128 83 8 1442 351 0 0 0 chr13 112353114 112353153 -7931159 + (CA)n Simple_repeat Simple_repeat 2 40 0 8 1442 359 287 0 22 chr13 112353340 112353429 -7930883 - ID_B1 SINE B4 -5 219 133 8 1442 831 289 0 30 chr13 112353548 112353618 -7930694 + ID SINE ID 12 75 -149 8 1442 526 264 19 89 chr13 112353618 112353776 -7930536 + B1F SINE Alu 1 147 -2 8 1442 660 280 13 0 chr13 112354385 112354537 -7929775 + RSINE1 SINE B4 1 154 -11 8 1442 447 92 0 0 chr13 112354537 112354602 -7929710 + (CA)n Simple_repeat Simple_repeat 1 65 0 8 1442 288 186 0 0 chr13 112355197 112355256 -7929056 + (TG)n Simple_repeat Simple_repeat 1 59 0 8 1442 466 295 18 9 chr13 112355308 112355421 -7928891 - B4A SINE B4 -158 134 21 8 1442 1590 155 108 75 chr13 112355421 112355783 -7928529 + ORR1D1 LTR MaLR 1 374 0 8 1442 931 140 0 27 chr13 112355833 112355980 -7928332 - B1_Mur4 SINE Alu -1 149 7 8 1442 362 244 7 152 chr13 112355861 112356006 -7928306 - MT2B LTR ERVL -325 276 153 8 1442 373 314 102 22 chr13 112356176 112356313 -7927999 + B1F SINE Alu 1 148 -1 8 1442 444 305 8 23 chr13 112356338 112356469 -7927843 + B1F SINE Alu 19 147 -2 8 1442 888 162 0 7 chr13 112356481 112356630 -7927682 + B1_Mur4 SINE Alu 3 150 0 8 1442 865 242 41 0 chr13 112356645 112356839 -7927473 + B3 SINE B2 1 202 -14 8 1442 2342 84 3 9 chr13 112356839 112357162 -7927150 + MT2C_Mm LTR ERVL 1 321 -154 8 1442 991 120 57 0 chr13 112357154 112357312 -7927000 - MT2C_Mm LTR ERVL -32 443 277 8 1442 330 304 46 46 chr13 112357446 112357598 -7926714 - RSINE1 SINE B4 -13 152 1 8 1442 423 0 0 0 chr13 112357608 112357655 -7926657 + (TTC)n Simple_repeat Simple_repeat 2 48 0 8 1442 1187 97 0 6 chr13 112357655 112357832 -7926480 + (TCC)n Simple_repeat Simple_repeat 3 178 0 8 1442 458 241 33 54 chr13 112357856 112358003 -7926309 + B1F2 SINE Alu 2 142 -7 8 1442 618 82 0 0 chr13 112358252 112358337 -7925975 + (TA)n Simple_repeat Simple_repeat 2 86 0 8 1442 22 35 0 0 chr13 112358455 112358484 -7925828 + AT_rich Low_complexity Low_complexity 1 29 0 8 1442 573 15 0 0 chr13 112358636 112358702 -7925610 + (TG)n Simple_repeat Simple_repeat 2 67 0 8 1442 520 212 102 7 chr13 112358761 112358908 -7925404 + L1MCa LINE L1 399 559 -5949 8 1442 474 297 43 7 chr13 112359018 112359157 -7925155 + ID_B1 SINE B4 81 224 0 8 1442 369 0 0 0 chr13 112359179 112359220 -7925092 + (TG)n Simple_repeat Simple_repeat 1 41 0 8 1442 270 0 0 0 chr13 112359220 112359250 -7925062 + (TGG)n Simple_repeat Simple_repeat 3 32 0 8 1442 680 260 27 0 chr13 112359447 112359597 -7924715 + RSINE1 SINE B4 1 154 -11 8 1442 381 247 14 0 chr13 112359669 112359742 -7924570 + ID SINE ID 9 82 -142 8 1442 229 293 13 26 chr13 112359746 112359823 -7924489 + L1MCa LINE L1 867 942 -5566 8 1442 982 159 0 0 chr13 112359826 112359977 -7924335 + RLTR24 LTR ERV1 1 151 -378 8 1442 435 335 87 67 chr13 112360003 112360195 -7924117 + Lx8 LINE L1 7071 7282 -191 8 1442 2880 35 55 3 chr13 112360195 112360542 -7923770 + RLTR10B2 LTR ERVK 1 365 0 8 1442 435 335 87 67 chr13 112360542 112360707 -7923605 + Lx8 LINE L1 7283 7435 -38 8 1442 1658 22 0 0 chr13 112360781 112360965 -7923347 + B2_Mm1a SINE B2 3 186 -7 8 1442 249 289 12 0 chr13 112361049 112361132 -7923180 + L1MCa LINE L1 1259 1342 -5166 8 1442 269 206 92 113 chr13 112361164 112361207 -7923105 + L1MCa LINE L1 1597 1641 -4867 8 1442 719 201 207 0 chr13 112361207 112361386 -7922926 + B3 SINE B2 1 216 0 8 1442 269 206 92 113 chr13 112361386 112361484 -7922828 + L1MCa LINE L1 1642 1734 -4774 8 1442 1099 139 6 0 chr13 112361487 112361660 -7922652 - RLTR11B LTR ERVK 0 453 280 8 1442 349 162 0 93 chr13 112361740 112361815 -7922497 - RLTR11B LTR ERVK -454 73 6 8 1442 221 250 0 51 chr13 112361826 112361885 -7922427 + B4 SINE B4 25 80 -212 8 1442 546 29 0 0 chr13 112361973 112362041 -7922271 + (TC)n Simple_repeat Simple_repeat 1 68 0 8 1442 336 238 50 0 chr13 112362047 112362127 -7922185 - B1_Mur1 SINE Alu -26 123 40 8 1442 642 218 0 0 chr13 112362130 112362644 -7921668 + CT-rich Low_complexity Low_complexity 1 514 0 8 1442 618 207 0 0 chr13 112362659 112362838 -7921474 + CT-rich Low_complexity Low_complexity 2 180 0 8 1442 473 200 34 17 chr13 112362841 112362958 -7921354 + (TCTCTG)n Simple_repeat Simple_repeat 2 120 0 8 1442 273 231 0 0 chr13 112362968 112363020 -7921292 - PB1D9 SINE Alu -66 54 3 8 1442 414 207 265 18 chr13 112363044 112363212 -7921100 - B3 SINE B2 0 195 1 8 1442 552 68 0 0 chr13 112363252 112363325 -7920987 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 8 1442 764 214 84 30 chr13 112363340 112363542 -7920770 + B3 SINE B2 1 213 -3 8 1442 858 256 20 30 chr13 112363559 112363756 -7920556 + B3 SINE B2 1 195 -21 8 1442 316 284 101 29 chr13 112363777 112363915 -7920397 - RSINE1 SINE B4 -1 164 17 8 1442 554 167 0 16 chr13 112364258 112364367 -7919945 - B1_Mur3 SINE Alu -10 110 11 8 1442 249 276 13 38 chr13 112364391 112364470 -7919842 - ID4 SINE ID -2 81 5 8 1442 330 265 10 58 chr13 112364504 112364608 -7919704 - L1MC4 LINE L1 -1192 6850 6752 8 1442 216 0 0 0 chr13 112364960 112364984 -7919328 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 8 1442 325 336 0 50 chr13 112365092 112365211 -7919101 - PB1D10 SINE Alu -3 114 2 8 1442 322 274 36 121 chr13 112365100 112365227 -7919085 - ID_B1 SINE B4 -26 198 80 8 1442 492 18 0 0 chr13 112365237 112365294 -7919018 + (TTTTA)n Simple_repeat Simple_repeat 2 58 0 8 1442 669 143 44 119 chr13 112365294 112365348 -7918964 - B1_Mur4 SINE Alu -8 142 84 8 1442 717 51 0 0 chr13 112365348 112365446 -7918866 + (TG)n Simple_repeat Simple_repeat 2 99 0 8 1442 669 143 44 119 chr13 112365446 112365539 -7918773 - B1_Mur4 SINE Alu -67 83 3 8 1442 322 274 36 121 chr13 112365539 112365577 -7918735 - ID SINE ID -145 79 47 8 1442 1563 57 0 5 chr13 112365721 112365916 -7918396 + B2_Mm2 SINE B2 2 195 0 8 1442 280 343 9 9 chr13 112366422 112366531 -7917781 + MIR SINE MIR 18 126 -136 9 1442 297 254 0 0 chr13 112367835 112367894 -7916418 - B1F SINE Alu -88 61 3 9 1442 537 252 63 0 chr13 112367931 112368058 -7916254 + ID_B1 SINE B4 88 222 -2 9 1442 229 279 63 98 chr13 112367947 112368090 -7916222 - YREP_Mm Unknown Unknown -1518 294 157 9 1442 768 231 23 6 chr13 112368120 112368294 -7916018 + B3A SINE B2 5 181 -17 9 1442 387 0 0 0 chr13 112368295 112368338 -7915974 + (CA)n Simple_repeat Simple_repeat 1 43 0 9 1442 283 229 221 35 chr13 112368357 112368443 -7915869 + PB1 SINE Alu 25 126 -1 9 1442 2438 62 6 3 chr13 112368800 112369122 -7915190 - L1_Mus3 LINE L1 0 6638 6316 9 1442 387 257 18 27 chr13 112369384 112369496 -7914816 - RSINE1 SINE B4 -53 112 2 9 1442 1226 35 7 0 chr13 112369526 112369671 -7914641 + B1_Mm SINE Alu 2 147 0 9 1442 460 308 22 15 chr13 112369707 112369842 -7914470 + ID_B1 SINE B4 83 218 -6 9 1442 1088 30 76 0 chr13 112369910 112370041 -7914271 + B1_Mm SINE Alu 2 142 -5 9 1442 195 69 0 0 chr13 112370057 112370086 -7914226 + (A)n Simple_repeat Simple_repeat 1 29 0 9 1442 369 0 0 0 chr13 112370249 112370290 -7914022 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 9 1442 1929 161 23 20 chr13 112370343 112370697 -7913615 + ORR1B1 LTR MaLR 40 394 0 9 1442 1178 82 0 0 chr13 112370948 112371095 -7913217 + B1_Mus1 SINE Alu 2 148 0 9 1442 210 270 63 0 chr13 112371127 112371190 -7913122 - ID4_ SINE ID -6 77 11 9 1442 385 276 0 54 chr13 112371228 112371339 -7912973 - B4A SINE B4 -1 291 187 9 1442 674 240 29 93 chr13 112371356 112371465 -7912847 - B3A SINE B2 -9 189 84 9 1442 3190 68 2 0 chr13 112371465 112371860 -7912452 + MTA_Mm LTR MaLR 1 396 0 9 1442 674 241 63 46 chr13 112371860 112371936 -7912376 - B3A SINE B2 -115 83 13 9 1442 236 30 30 0 chr13 112371948 112371981 -7912331 + (TTTTTG)n Simple_repeat Simple_repeat 6 39 0 9 1442 415 333 7 20 chr13 112372060 112372207 -7912105 - ID_B1 SINE B4 0 224 80 9 1442 514 221 29 0 chr13 112372948 112373052 -7911260 + PB1D10 SINE Alu 6 112 -5 9 1442 1125 84 0 0 chr13 112373107 112373250 -7911062 + B1_Mus1 SINE Alu 5 147 -1 9 1442 438 20 0 0 chr13 112373250 112373301 -7911011 + (GA)n Simple_repeat Simple_repeat 2 52 0 9 1442 201 74 0 0 chr13 112373553 112373580 -7910732 + (TA)n Simple_repeat Simple_repeat 2 28 0 9 1442 23 86 0 0 chr13 112373610 112373668 -7910644 + AT_rich Low_complexity Low_complexity 1 58 0 9 1442 2101 63 7 0 chr13 112373685 112373954 -7910358 - ORR1A2 LTR MaLR -8 319 49 9 1442 296 154 67 0 chr13 112373964 112374068 -7910244 + (TA)n Simple_repeat Simple_repeat 1 111 0 9 1442 1935 103 34 15 chr13 112374351 112374682 -7909630 - ORR1A4 LTR MaLR -28 366 1 9 1442 496 304 44 15 chr13 112374689 112374853 -7909459 + B3A SINE B2 39 208 -8 9 1442 849 98 81 22 chr13 112374903 112375039 -7909273 + B1_Mus1 SINE Alu 5 148 0 9 1442 422 36 18 0 chr13 112375061 112375117 -7909195 + (GA)n Simple_repeat Simple_repeat 2 58 0 9 1442 325 220 13 56 chr13 112375257 112375358 -7908954 + MLT1E2 LTR MaLR 558 627 0 9 1442 387 0 0 0 chr13 112375847 112375890 -7908422 + (TG)n Simple_repeat Simple_repeat 1 43 0 9 1442 2282 191 54 43 chr13 112376220 112376410 -7907902 + RLTR20C LTR ERVK 1 185 -349 9 1442 1547 32 43 0 chr13 112376410 112376595 -7907717 + B2_Mm1t SINE B2 1 193 0 9 1442 2282 191 54 43 chr13 112376595 112376845 -7907467 + RLTR20C LTR ERVK 186 443 -91 9 1442 297 68 0 0 chr13 112376845 112376889 -7907423 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 1442 2282 191 54 43 chr13 112376889 112376962 -7907350 + RLTR20C LTR ERVK 444 521 -13 9 1442 1748 98 39 0 chr13 112376960 112377214 -7907098 + ORR1A2 LTR MaLR 56 319 -8 9 1442 3198 126 56 9 chr13 112377218 112377753 -7906559 + ORR1A2-int LTR MaLR 1 560 -1403 9 1442 244 279 177 0 chr13 112377758 112377837 -7906475 + RSINE1 SINE B4 45 137 -28 9 1442 744 223 151 34 chr13 112377969 112378219 -7906093 + MTD LTR MaLR 1 300 -107 9 1442 1194 20 0 40 chr13 112378424 112378438 -7905874 - B1_Mm SINE Alu 0 147 138 9 1442 446 0 0 18 chr13 112378438 112378493 -7905819 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 9 1442 1194 20 0 40 chr13 112378493 112378630 -7905682 - B1_Mm SINE Alu -10 137 2 9 1442 576 186 21 0 chr13 112378747 112378844 -7905468 - B1_Mus1 SINE Alu -11 137 39 9 1442 424 277 116 22 chr13 112378887 112379068 -7905244 - B4A SINE B4 -39 253 56 9 1442 270 301 108 0 chr13 112379142 112379235 -7905077 + PB1D9 SINE Alu 1 103 -17 9 1442 461 232 186 37 chr13 112379383 112379571 -7904741 + B3 SINE B2 1 216 0 9 1442 410 204 10 0 chr13 112379740 112379838 -7904474 + CT-rich Low_complexity Low_complexity 1 99 0 9 1442 512 238 9 0 chr13 112379853 112379958 -7904354 - PB1 SINE Alu -3 124 19 9 1442 392 43 0 0 chr13 112380095 112380142 -7904170 - ORR1A3 LTR MaLR -8 318 272 9 1442 863 70 0 0 chr13 112380160 112380274 -7904038 - B1_Mus1 SINE Alu 0 148 35 9 1442 1163 100 0 0 chr13 112380273 112380433 -7903879 - ORR1A3 LTR MaLR -41 285 126 9 1442 1013 117 7 0 chr13 112380427 112380572 -7903740 + ORR1A3-int LTR MaLR 1498 1643 -320 9 1442 660 152 68 102 chr13 112380545 112380692 -7903620 - ORR1A3 LTR MaLR -185 142 1 9 1442 8128 115 10 29 chr13 112380692 112382018 -7902294 - ORR1A3-int LTR MaLR 0 1963 663 9 1442 287 291 126 11 chr13 112381953 112382040 -7902272 - B1_Mus1 SINE Alu -44 104 8 9 1442 567 178 28 26 chr13 112382029 112382142 -7902170 + B1F2 SINE Alu 15 120 0 9 1442 1060 134 0 0 chr13 112382854 112383003 -7901309 + B1_Mur4 SINE Alu 2 150 0 9 1442 1109 123 6 0 chr13 112383024 112383203 -7901109 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 9 1442 806 236 37 46 chr13 112383207 112383425 -7900887 + ID_B1 SINE B4 3 218 -6 9 1442 192 77 0 0 chr13 112383921 112383947 -7900365 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 9 1442 712 55 266 9 chr13 112383947 112384056 -7900256 - B1_Mus1 SINE Alu -11 137 1 9 1442 279 0 0 0 chr13 112384285 112384316 -7899996 + (TG)n Simple_repeat Simple_repeat 1 31 0 9 1442 369 0 0 0 chr13 112384316 112384356 -7899956 + (GA)n Simple_repeat Simple_repeat 1 41 0 9 1442 620 266 0 8 chr13 112384356 112384481 -7899831 - ID_B1 SINE B4 -19 205 82 9 1442 426 39 0 0 chr13 112384482 112384534 -7899778 + (TG)n Simple_repeat Simple_repeat 2 53 0 9 1442 1656 36 0 0 chr13 112385631 112385824 -7898488 + B2_Mm1a SINE B2 1 193 0 9 1442 21 0 0 0 chr13 112386330 112386351 -7897961 + AT_rich Low_complexity Low_complexity 1 21 0 9 1442 789 120 3 12 chr13 112386353 112386482 -7897830 - B1_Mus1 SINE Alu 0 148 2 9 1442 323 314 8 0 chr13 112386742 112387007 -7897305 + (TG)n Simple_repeat Simple_repeat 1 267 0 9 1442 206 244 17 44 chr13 112386981 112387161 -7897151 + (TATG)n Simple_repeat Simple_repeat 1 175 0 9 1442 226 299 11 0 chr13 112387222 112387396 -7896916 + (TG)n Simple_repeat Simple_repeat 1 176 0 9 1442 539 320 11 0 chr13 112387414 112387592 -7896720 + (TG)n Simple_repeat Simple_repeat 1 180 0 9 1442 1045 267 24 21 chr13 112387608 112387899 -7896413 - B4A SINE B4 0 292 1 9 1442 911 300 5 0 chr13 112387902 112388112 -7896200 - ID_B1 SINE B4 -2 222 12 9 1442 249 191 0 11 chr13 112388653 112388716 -7895596 + PB1D7 SINE Alu 42 102 -18 9 1442 548 182 23 23 chr13 112388853 112389027 -7895285 + GA-rich Low_complexity Low_complexity 3 176 0 9 1442 27 0 0 0 chr13 112389043 112389070 -7895242 + AT_rich Low_complexity Low_complexity 1 27 0 9 1442 3181 112 36 16 chr13 112389070 112389620 -7894692 - Lx3B LINE L1 -5 6976 6375 9 1442 209 210 25 0 chr13 112390182 112390263 -7894049 + (CCTG)n Simple_repeat Simple_repeat 2 84 0 9 1442 510 244 24 8 chr13 112390427 112390551 -7893761 - RSINE1 SINE B4 -37 128 3 9 1442 352 244 39 0 chr13 112390696 112390774 -7893538 - B1F SINE Alu -13 136 56 9 1442 24 53 0 0 chr13 112390907 112390945 -7893367 + AT_rich Low_complexity Low_complexity 1 38 0 9 1442 818 164 0 0 chr13 112391102 112391236 -7893076 - B1_Mur1 SINE Alu -6 143 10 9 1442 528 59 0 0 chr13 112391382 112391450 -7892862 + (CAG)n Simple_repeat Simple_repeat 1 68 0 9 1442 399 207 58 0 chr13 112391951 112392038 -7892274 - ID_B1 SINE B4 -21 203 112 9 1442 246 216 147 13 chr13 112391977 112392052 -7892260 - PB1D7 SINE Alu -26 94 10 9 1442 1146 124 0 0 chr13 112392059 112392469 -7891843 + (TG)n Simple_repeat Simple_repeat 1 410 0 9 1442 1435 103 0 5 chr13 112392514 112392709 -7891603 - B2_Mm2 SINE B2 0 195 2 9 1442 1226 88 11 0 chr13 112392789 112392970 -7891342 - B2_Mm1a SINE B2 -4 189 7 9 1442 23 33 0 0 chr13 112393236 112393266 -7891046 + AT_rich Low_complexity Low_complexity 1 30 0 9 1442 204 40 0 0 chr13 112393282 112393307 -7891005 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 1442 216 184 0 0 chr13 112393406 112393444 -7890868 - B3A SINE B2 -160 38 1 9 1442 1210 62 0 0 chr13 112393457 112393603 -7890709 - B1_Mm SINE Alu 0 147 2 9 1442 238 26 25 25 chr13 112393610 112393650 -7890662 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 9 1442 216 274 21 21 chr13 112393664 112393761 -7890551 + L3 LINE CR1 3555 3651 -838 9 1442 195 42 0 0 chr13 112394083 112394107 -7890205 + (CA)n Simple_repeat Simple_repeat 2 25 0 9 1442 294 342 54 9 chr13 112394385 112394497 -7889815 + B1F1 SINE Alu 1 117 -32 9 1442 404 233 87 0 chr13 112394627 112394730 -7889582 - ID_B1 SINE B4 -20 204 93 9 1442 333 0 0 0 chr13 112394799 112394836 -7889476 + (CA)n Simple_repeat Simple_repeat 1 37 0 9 1442 1648 182 116 0 chr13 112395594 112395929 -7888383 - ORR1C1 LTR MaLR 0 378 5 9 1442 378 0 0 0 chr13 112396842 112396884 -7887428 + (TG)n Simple_repeat Simple_repeat 2 43 0 9 1442 467 300 41 82 chr13 112396886 112396969 -7887343 - B4A SINE B4 -23 269 87 9 1442 545 217 0 19 chr13 112396969 112397077 -7887235 - B1_Mur2 SINE Alu -42 107 2 9 1442 29 28 0 0 chr13 112397086 112397122 -7887190 + AT_rich Low_complexity Low_complexity 1 36 0 1 1442 1527 107 218 133 chr13 112397245 112397428 -7886884 - RLTR47_MM LTR ERV1 -4 528 353 1 1442 1252 47 0 0 chr13 112397428 112397576 -7886736 - B1_Mus1 SINE Alu 0 148 1 1 1442 1527 107 218 133 chr13 112397576 112397787 -7886525 - RLTR47_MM LTR ERV1 -180 352 122 1 1442 261 0 0 0 chr13 112397787 112397816 -7886496 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1442 1527 107 218 133 chr13 112397816 112397907 -7886405 - RLTR47_MM LTR ERV1 -411 121 2 1 1442 583 318 20 102 chr13 112397920 112398165 -7886147 - B4A SINE B4 -58 234 10 1 1442 1766 120 119 29 chr13 112398245 112398606 -7885706 - RMER16 LTR ERVK 0 533 3 1 1442 681 281 39 54 chr13 112398608 112398910 -7885402 - MTE2b LTR MaLR -93 286 19 1 1442 225 216 19 56 chr13 112399300 112399354 -7884958 - PB1 SINE Alu -75 52 1 1 1442 410 222 81 41 chr13 112399368 112399537 -7884775 + L1M4 LINE L1 4099 4260 -1886 1 1442 956 25 0 0 chr13 112399590 112399711 -7884601 + B1_Mm SINE Alu 27 147 0 1 1442 257 48 48 0 chr13 112399713 112399755 -7884557 + (TAAAA)n Simple_repeat Simple_repeat 2 45 0 1 1442 1940 217 40 135 chr13 112399864 112400539 -7883773 - RMER19C LTR ERVK 0 611 1 1 1442 1238 102 21 31 chr13 112400672 112400865 -7883447 - B2_Mm2 SINE B2 -3 192 2 1 1442 2635 149 97 45 chr13 112401101 112401650 -7882662 + RLTR20A2 LTR ERVK 2 578 0 1 1442 322 329 43 6 chr13 112401781 112401943 -7882369 + L1M4 LINE L1 5032 5199 -947 1 1442 477 0 0 0 chr13 112402026 112402079 -7882233 + (CA)n Simple_repeat Simple_repeat 1 53 0 1 1442 970 189 55 15 chr13 112402161 112402360 -7881952 + B3 SINE B2 1 207 -9 1 1442 270 0 0 0 chr13 112402360 112402390 -7881922 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1 1442 236 77 0 25 chr13 112402722 112402762 -7881550 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1 1442 353 241 0 136 chr13 112402772 112402897 -7881415 - B1F SINE Alu -30 119 12 1 1442 561 30 0 0 chr13 112402930 112402997 -7881315 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 1 1442 574 168 151 67 chr13 112402998 112403177 -7881135 + B3A SINE B2 4 197 -1 1 1442 291 28 0 0 chr13 112403229 112403265 -7881047 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1442 398 215 62 45 chr13 112403439 112403551 -7880761 - PB1D10 SINE Alu -3 114 1 1 1442 935 137 14 7 chr13 112403580 112403720 -7880592 - B1_Mur2 SINE Alu -8 141 1 1 1442 1782 113 142 37 chr13 112404281 112404576 -7879736 + ORR1A3 LTR MaLR 1 326 0 1 1442 1406 87 11 0 chr13 112405573 112405758 -7878554 + B2_Mm2 SINE B2 1 187 -8 1 1442 686 253 47 40 chr13 112405945 112406221 -7878091 + RLTR15 LTR ERVK 66 343 -16 1 1442 286 317 12 0 chr13 112406425 112406507 -7877805 + LTR16A LTR ERVL 217 299 -152 1 1442 228 177 47 31 chr13 112406687 112406751 -7877561 + MER103 DNA DNA 99 163 -3 1 1442 266 225 62 0 chr13 112407091 112407171 -7877141 + PB1D10 SINE Alu 28 112 -5 1 1442 673 290 80 80 chr13 112407201 112407492 -7876820 + L1M4 LINE L1 4730 5028 -1118 1 1442 675 232 71 62 chr13 112407492 112407703 -7876609 + B3 SINE B2 3 215 -1 1 1442 673 290 80 80 chr13 112407703 112407959 -7876353 + L1M4 LINE L1 5029 5277 -869 1 1442 305 101 324 27 chr13 112407959 112408070 -7876242 - B2_Mm2 SINE B2 -5 190 47 1 1442 877 161 106 0 chr13 112408117 112408278 -7876034 - B2_Mm1t SINE B2 -14 179 2 1 1442 944 238 10 5 chr13 112408326 112408529 -7875783 + B3 SINE B2 1 204 -12 1 1442 239 0 32 0 chr13 112408966 112408997 -7875315 + (CAAAA)n Simple_repeat Simple_repeat 5 36 0 1 1442 318 288 80 27 chr13 112409886 112410036 -7874276 + RSINE1 SINE B4 4 161 -4 1 1442 384 308 63 49 chr13 112410130 112410417 -7873895 + MLT2C1 LTR ERVL 1 291 -106 1 1442 378 285 38 23 chr13 112410563 112410696 -7873616 - Tigger7 DNA MER2_type -2301 190 56 1 1442 471 63 0 0 chr13 112411034 112411097 -7873215 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 1442 234 0 0 0 chr13 112411097 112411123 -7873189 + (CA)n Simple_repeat Simple_repeat 1 26 0 1 1442 324 0 0 0 chr13 112411123 112411158 -7873154 + (GA)n Simple_repeat Simple_repeat 2 37 0 1 1442 409 330 116 40 chr13 112411162 112411532 -7872780 - Zaphod DNA Tip100 -3561 470 73 1 1442 795 142 0 0 chr13 112411562 112411724 -7872588 + (TG)n Simple_repeat Simple_repeat 2 163 0 1 1442 271 326 43 0 chr13 112412153 112412245 -7872067 + MER96 DNA hAT 1 96 -79 1 1442 792 301 21 25 chr13 112412297 112412583 -7871729 - Lx8 LINE L1 -36 7437 7153 1 1442 225 307 83 25 chr13 112412891 112413048 -7871264 - L1M6 LINE L1 -5836 660 495 1 1442 270 0 0 0 chr13 112414578 112414608 -7869704 + (TC)n Simple_repeat Simple_repeat 2 31 0 1 1442 234 0 0 0 chr13 112414677 112414703 -7869609 + (TC)n Simple_repeat Simple_repeat 1 26 0 1 1442 438 250 143 0 chr13 112414736 112414848 -7869464 - B1_Mur1 SINE Alu -21 128 1 1 1442 352 252 41 69 chr13 112414900 112415045 -7869267 - ID_B1 SINE B4 -52 172 32 1 1442 342 256 123 18 chr13 112416292 112416455 -7867857 - B2_Mm2 SINE B2 -14 181 2 1 1442 347 60 20 0 chr13 112416844 112416894 -7867418 + (CCCCCT)n Simple_repeat Simple_repeat 6 56 0 1 1442 566 233 0 8 chr13 112416977 112417098 -7867214 - PB1D7 SINE Alu 0 120 1 1 1442 254 50 25 0 chr13 112417147 112417187 -7867125 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1442 25 0 0 0 chr13 112417292 112417317 -7866995 + AT_rich Low_complexity Low_complexity 1 25 0 1 1442 501 246 8 0 chr13 112418022 112418140 -7866172 - L1MA10 LINE L1 -1 6333 6215 1 1442 273 118 0 0 chr13 112418329 112418380 -7865932 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 1 1442 690 142 38 1 chr13 112418392 112418524 -7865788 - B1_Mus1 SINE Alu 0 149 12 1 1442 272 280 11 11 chr13 112418525 112418619 -7865693 - L1ME1 LINE L1 -239 5940 5847 1 1442 326 157 155 12 chr13 112418749 112418833 -7865479 + MTD LTR MaLR 114 209 -210 1 1442 785 224 52 0 chr13 112418965 112419175 -7865137 + MTD LTR MaLR 196 416 -3 1 1442 21 71 0 0 chr13 112419180 112419222 -7865090 + AT_rich Low_complexity Low_complexity 1 42 0 1 1442 254 207 16 94 chr13 112419227 112419291 -7865021 - B1_Mur3 SINE Alu -83 66 8 1 1442 212 260 76 76 chr13 112419228 112419307 -7865005 - B4A SINE B4 -142 150 72 1 1442 920 245 125 20 chr13 112419372 112419668 -7864644 - Lx8 LINE L1 -330 7143 6817 1 1442 246 62 0 0 chr13 112419691 112419723 -7864589 + (TG)n Simple_repeat Simple_repeat 1 32 0 1 1442 231 36 0 0 chr13 112419723 112419750 -7864562 + (GA)n Simple_repeat Simple_repeat 1 28 0 1 1442 627 261 0 0 chr13 112419751 112419893 -7864419 - RSINE1 SINE B4 -22 143 2 1 1442 251 211 18 29 chr13 112419893 112419980 -7864332 - L1ME1 LINE L1 -975 5369 5283 1 1442 349 290 186 21 chr13 112420058 112420294 -7864018 - L1MB3 LINE L1 -2 6181 5907 1 1442 380 271 8 39 chr13 112420314 112420441 -7863871 - PB1 SINE Alu -4 123 1 1 1442 189 0 0 0 chr13 112420476 112420497 -7863815 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 1 1442 239 243 122 0 chr13 112420528 112420602 -7863710 - ID_B1 SINE B4 -60 164 82 1 1442 611 203 115 15 chr13 112420812 112420942 -7863370 + B1F SINE Alu 1 143 -6 1 1442 763 228 0 13 chr13 112420988 112421139 -7863173 - B1_Mur2 SINE Alu 0 149 1 1 1442 436 233 19 0 chr13 112421217 112421320 -7862992 - B4A SINE B4 -180 112 8 1 1442 575 307 0 35 chr13 112421851 112422020 -7862292 + RSINE1 SINE B4 3 165 0 1 1442 519 296 72 94 chr13 112422080 112422338 -7861974 - L1MEf LINE L1 -3386 2760 2488 1 1442 327 282 9 18 chr13 112422338 112422450 -7861862 - PB1D10 SINE Alu -2 115 5 1 1442 519 302 54 48 chr13 112422450 112422591 -7861721 - L1MEf LINE L1 -3659 2487 2346 1 1442 1017 101 0 0 chr13 112422764 112422912 -7861400 + B2_Mm2 SINE B2 1 148 -47 1 1442 24 0 0 0 chr13 112422917 112422941 -7861371 + AT_rich Low_complexity Low_complexity 1 24 0 1 1442 405 0 0 0 chr13 112422941 112422986 -7861326 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1442 292 270 50 0 chr13 112423115 112423215 -7861097 - L1MEf LINE L1 -4055 2187 2083 1 1442 323 78 20 0 chr13 112423577 112423628 -7860684 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1 1442 441 312 51 25 chr13 112423639 112423797 -7860515 - RSINE1 SINE B4 -2 163 2 1 1442 297 0 0 0 chr13 112423903 112423936 -7860376 + (TC)n Simple_repeat Simple_repeat 2 34 0 1 1442 225 0 0 0 chr13 112424086 112424111 -7860201 + (CA)n Simple_repeat Simple_repeat 2 26 0 1 1442 261 146 0 0 chr13 112424214 112424262 -7860050 + (T)n Simple_repeat Simple_repeat 1 48 0 1 1442 25 0 0 0 chr13 112424992 112425017 -7859295 + GC_rich Low_complexity Low_complexity 1 25 0 1 1442 1223 41 0 7 chr13 112425582 112425728 -7858584 - B1_Mus2 SINE Alu -2 145 1 1 1442 266 314 61 47 chr13 112425824 112425945 -7858367 - L1MD3 LINE L1 -194 7801 7674 1 1442 1346 57 80 0 chr13 112425945 112425960 -7858352 - B2_Mm1a SINE B2 -3 190 176 1 1442 207 0 0 0 chr13 112425960 112425983 -7858329 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 1 1442 1346 57 80 0 chr13 112425983 112426142 -7858170 - B2_Mm1a SINE B2 -18 175 3 1 1442 266 314 61 47 chr13 112426142 112426297 -7858015 - L1MD3 LINE L1 -322 7673 7521 1 1442 281 272 25 0 chr13 112426629 112426710 -7857602 + ID4 SINE ID 1 83 0 1 1442 228 250 19 0 chr13 112426725 112426777 -7857535 + (TGG)n Simple_repeat Simple_repeat 3 55 0 1 1442 1695 160 26 96 chr13 112426780 112427167 -7857145 + ORR1B2 LTR MaLR 1 360 -7 1 1442 872 252 30 0 chr13 112427351 112427553 -7856759 - B3 SINE B2 -7 209 2 1 1442 252 59 0 0 chr13 112427595 112427629 -7856683 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1442 348 93 19 0 chr13 112427630 112427684 -7856628 - RLTR25A LTR ERVK -454 649 595 1 1442 1397 150 241 41 chr13 112427678 112428068 -7856244 + RLTR25A LTR ERVK 631 1098 -5 1 1442 693 242 7 14 chr13 112428074 112428242 -7856070 + ORR1D2 LTR MaLR 31 184 -183 1 1442 766 248 9 59 chr13 112429611 112429792 -7854520 - B3 SINE B2 -6 210 40 1 1442 1495 63 0 11 chr13 112429792 112429983 -7854329 - B2_Mm1a SINE B2 -3 190 2 1 1442 766 248 9 59 chr13 112429983 112430020 -7854292 - B3 SINE B2 -177 39 3 1 1442 199 311 111 32 chr13 112430750 112430876 -7853436 + L2c LINE L2 3251 3386 -1 1 1442 817 192 14 0 chr13 112431212 112431358 -7852954 - B1_Mur4 SINE Alu -1 149 2 1 1442 498 33 0 0 chr13 112431417 112431477 -7852835 + (TC)n Simple_repeat Simple_repeat 1 60 0 1 1442 506 222 0 9 chr13 112431478 112431587 -7852725 - B1_Mur1 SINE Alu 0 149 42 1 1442 1077 229 19 0 chr13 112431963 112432173 -7852139 + B3 SINE B2 1 214 -2 1 1442 249 187 0 0 chr13 112432181 112432265 -7852047 + GA-rich Low_complexity Low_complexity 1 84 0 1 1442 954 297 98 10 chr13 112432265 112432561 -7851751 - MTEa LTR MaLR -57 322 1 1 1442 1616 235 14 42 chr13 112433038 112433400 -7850912 + MTD LTR MaLR 1 349 -70 1 1442 371 73 18 0 chr13 112433400 112433455 -7850857 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 1442 1616 235 14 42 chr13 112433455 112433523 -7850789 + MTD LTR MaLR 350 418 -1 1 1442 374 325 0 0 chr13 112433976 112434093 -7850219 - ID_B1 SINE B4 -5 219 103 1 1442 195 42 0 0 chr13 112434100 112434124 -7850188 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1 1442 1356 262 68 33 chr13 112434148 112434574 -7849738 - Lx8 LINE L1 -21 7452 7012 1 1442 292 232 22 44 chr13 112434697 112434787 -7849525 - L1MD1 LINE L1 -7 6235 6148 1 1442 916 293 97 29 chr13 112434814 112435197 -7849115 - L1MD1 LINE L1 -302 5940 5532 1 1442 661 285 44 24 chr13 112435428 112435680 -7848632 - L1MD1 LINE L1 -859 5287 5031 1 1442 421 295 123 9 chr13 112435693 112435905 -7848407 - L1MC LINE L1 -2168 3978 3743 1 1442 213 318 24 0 chr13 112437465 112437550 -7846762 - L2 LINE L2 -582 2837 2751 1 1442 652 302 130 8 chr13 112438054 112438408 -7845904 + LTR16B LTR ERVL 1 435 -45 1 1442 1050 172 212 48 chr13 112439433 112439744 -7844568 + ORR1D1 LTR MaLR 11 372 -2 1 1442 230 299 61 38 chr13 112439831 112439963 -7844349 - Kanga11a DNA Tc2 0 970 836 1 1442 260 0 57 0 chr13 112440378 112440413 -7843899 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 1 1442 495 0 0 0 chr13 112440413 112440467 -7843845 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1442 764 39 15 37 chr13 112440479 112440613 -7843699 + (CA)n Simple_repeat Simple_repeat 1 131 0 1 1442 557 288 23 0 chr13 112440635 112440767 -7843545 - RSINE1 SINE B4 -20 145 11 1 1442 225 132 0 0 chr13 112442126 112442164 -7842148 + (CAAT)n Simple_repeat Simple_repeat 4 41 0 1 1442 790 182 0 0 chr13 112442293 112442430 -7841882 - B1_Mus1 SINE Alu -10 138 2 1 1442 608 300 6 24 chr13 112442677 112442841 -7841471 - B3A SINE B2 -35 163 3 1 1442 265 364 53 0 chr13 112443100 112443251 -7841061 + MLT1J2 LTR MaLR 37 195 -253 1 1442 932 40 184 0 chr13 112443819 112443944 -7840368 - B1_Mus1 SINE Alu 0 148 1 1 1442 425 335 11 54 chr13 112444085 112444271 -7840041 - MTEa LTR MaLR -1 378 201 1 1442 573 256 15 0 chr13 112444266 112444399 -7839913 - B3A SINE B2 -62 136 2 1 1442 732 206 61 33 chr13 112444399 112444561 -7839751 - MTEa LTR MaLR -199 180 13 1 1442 1029 93 36 0 chr13 112444561 112444701 -7839611 + B1_Mm SINE Alu 2 146 -1 1 1442 732 206 61 33 chr13 112444701 112444713 -7839599 - MTEa LTR MaLR -367 12 1 1 1442 1333 276 200 11 chr13 112445027 112445642 -7838670 - Lx8 LINE L1 0 7473 6743 1 1442 2402 163 19 7 chr13 112445721 112446136 -7838176 - MTC LTR MaLR -1 420 1 1 1442 444 19 0 0 chr13 112447090 112447143 -7837169 + (GA)n Simple_repeat Simple_repeat 2 54 0 1 1442 1111 255 112 18 chr13 112447692 112448031 -7836281 - MTE2b LTR MaLR -6 373 3 1 1442 288 336 0 90 chr13 112447912 112448046 -7836266 - MT2A LTR ERVL -411 122 1 1 1442 201 280 89 10 chr13 112448319 112448420 -7835892 + MIR3 SINE MIR 98 206 -2 1 1442 213 315 31 52 chr13 112449953 112450050 -7834262 - MIRc SINE MIR -82 186 92 1 1442 400 277 59 83 chr13 112450653 112450822 -7833490 - MER20 DNA MER1_type -54 165 1 1 1442 183 294 0 0 chr13 112450831 112450882 -7833430 - MIR SINE MIR -2 260 210 1 1442 288 0 0 0 chr13 112451090 112451122 -7833190 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1 1442 351 0 0 0 chr13 112451355 112451394 -7832918 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1 1442 1098 73 0 0 chr13 112451395 112451531 -7832781 - B1_Mus1 SINE Alu -12 136 1 1 1442 1481 57 0 50 chr13 112451534 112451736 -7832576 - B2_Mm2 SINE B2 -2 193 2 1 1442 477 248 57 8 chr13 112452152 112452274 -7832038 - B1F SINE Alu -13 136 9 1 1442 293 217 116 35 chr13 112452962 112453048 -7831264 + B1F SINE Alu 2 94 -55 1 1442 954 103 13 33 chr13 112453389 112453540 -7830772 + B1_Mur2 SINE Alu 2 149 0 1 1442 261 0 0 0 chr13 112453540 112453569 -7830743 + (CAAAAA)n Simple_repeat Simple_repeat 1 29 0 1 1442 652 287 23 6 chr13 112454298 112454473 -7829839 + B3A SINE B2 5 182 -16 1 1442 666 277 73 52 chr13 112454715 112455061 -7829251 + RLTR11B LTR ERVK 1 358 -64 1 1442 1226 289 59 49 chr13 112455124 112455699 -7828613 - L1MB8 LINE L1 -112 6066 5486 1 1442 2786 103 12 86 chr13 112455969 112456456 -7827856 + RLTR11B LTR ERVK 3 453 0 1 1442 471 270 224 43 chr13 112456538 112456809 -7827503 + MLT2B1 LTR ERVL 1 320 -200 1 1442 477 0 0 0 chr13 112456880 112456933 -7827379 + (TCTA)n Simple_repeat Simple_repeat 2 54 0 1 1442 207 0 0 0 chr13 112457136 112457159 -7827153 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1 1442 1193 75 0 0 chr13 112457160 112457307 -7827005 - B1_Mus1 SINE Alu 0 148 2 1 1442 752 207 0 33 chr13 112457715 112457865 -7826447 + B1_Mur1 SINE Alu 2 146 -3 1 1442 434 260 132 58 chr13 112457892 112458149 -7826163 + B4A SINE B4 1 276 -16 1 1442 494 31 16 0 chr13 112458177 112458241 -7826071 + (CA)n Simple_repeat Simple_repeat 1 65 0 1 1442 297 267 33 0 chr13 112458265 112458355 -7825957 - MLT2B3 LTR ERVL -461 93 1 1 1442 440 191 162 11 chr13 112458484 112458660 -7825652 - MTD LTR MaLR 0 419 186 1 1442 1189 103 0 130 chr13 112458663 112458886 -7825426 - B2_Mm2 SINE B2 0 195 2 1 1442 227 31 0 30 chr13 112459027 112459060 -7825252 + (CAAA)n Simple_repeat Simple_repeat 3 34 0 1 1442 534 321 77 37 chr13 112459060 112459332 -7824980 - Lx7 LINE L1 -388 7308 7026 1 1442 844 186 182 8 chr13 112459341 112459591 -7824721 + ORR1B2 LTR MaLR 1 326 -58 1 1442 438 241 0 0 chr13 112459591 112459674 -7824638 - Lx7 LINE L1 -997 6699 6617 1 180 1714 141 103 57 chr13 112459674 112459841 -7824471 + ORR1B1 LTR MaLR 1 183 -211 1 1443 1655 31 5 0 chr13 112459841 112460033 -7824279 - B2_Mm1t SINE B2 0 193 1 1 1443 1714 141 103 57 chr13 112460033 112460234 -7824078 + ORR1B1 LTR MaLR 184 386 -8 1 1443 795 316 83 46 chr13 112460234 112460298 -7824014 - Lx8 LINE L1 -838 6635 6572 1 1443 1422 93 0 5 chr13 112460298 112460492 -7823820 - B2_Mm2 SINE B2 -2 193 1 1 1443 795 316 83 46 chr13 112460492 112460778 -7823534 - Lx8 LINE L1 -902 6571 6272 1 1443 209 316 0 0 chr13 112461509 112461566 -7822746 + CT-rich Low_complexity Low_complexity 5 61 0 1 1443 473 258 67 22 chr13 112461567 112461702 -7822610 - B1F SINE Alu -8 141 1 1 1443 1708 93 31 77 chr13 112461731 112462056 -7822256 - ORR1A4 LTR MaLR -2 327 18 1 1443 6155 189 68 66 chr13 112462063 112463814 -7820498 - ORR1A4-int LTR MaLR 0 1963 140 1 1443 996 96 0 14 chr13 112464029 112464177 -7820135 + B1_Mus1 SINE Alu 3 148 0 1 1443 369 0 0 0 chr13 112464201 112464242 -7820070 + (TTCC)n Simple_repeat Simple_repeat 4 44 0 1 1443 732 206 57 0 chr13 112464247 112464388 -7819924 - B1_Mur4 SINE Alu -1 149 1 1 1443 347 303 73 87 chr13 112464613 112464921 -7819391 + B4A SINE B4 7 274 -18 1 1443 1718 95 19 67 chr13 112464953 112465269 -7819043 + ORR1A4 LTR MaLR 3 303 -26 1 1443 673 52 47 94 chr13 112465280 112465408 -7818904 + ORR1A4-int LTR MaLR 3 124 -1839 1 1443 333 0 0 0 chr13 112465413 112465450 -7818862 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1443 324 238 25 0 chr13 112465498 112465578 -7818734 - B3A SINE B2 -103 95 14 1 1443 996 267 31 44 chr13 112465809 112466126 -7818186 - Lx6 LINE L1 -27 7433 7121 1 1443 340 235 16 40 chr13 112466310 112466434 -7817878 + Charlie2a DNA MER1_type 1326 1446 -1415 1 1443 884 269 99 127 chr13 112466436 112466531 -7817781 + Lx8 LINE L1 6827 6922 -551 1 1443 1190 61 7 0 chr13 112466531 112466678 -7817634 + B1_Mus1 SINE Alu 1 148 0 1 1443 884 269 99 127 chr13 112466678 112466704 -7817608 + Lx8 LINE L1 6923 6923 -550 1 1443 2901 157 88 6 chr13 112466704 112467235 -7817077 - RMER15 LTR ERVL 0 575 1 1 1443 884 269 99 127 chr13 112467235 112467538 -7816774 + Lx8 LINE L1 6923 7240 -233 1 1443 447 318 87 36 chr13 112467741 112468074 -7816238 + Charlie2a DNA MER1_type 1586 1935 -926 1 1443 684 196 51 0 chr13 112468114 112468252 -7816060 + B1_Mus1 SINE Alu 2 146 -2 1 1443 690 291 44 11 chr13 112468331 112468605 -7815707 - B4A SINE B4 -9 283 1 1 1443 883 154 7 7 chr13 112468700 112468844 -7815468 + B1_Mus1 SINE Alu 5 148 0 1 1443 1198 74 0 0 chr13 112468848 112468996 -7815316 + B1_Mus1 SINE Alu 1 148 0 1 1443 216 162 43 29 chr13 112469000 112469070 -7815242 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 1 1443 323 318 99 15 chr13 112469123 112469385 -7814927 + Charlie2a DNA MER1_type 2092 2375 -486 1 1443 597 303 7 0 chr13 112469856 112470008 -7814304 + B3A SINE B2 28 180 -18 1 1443 1107 80 0 0 chr13 112470113 112470251 -7814061 + B1_Mus1 SINE Alu 3 140 -8 1 1443 453 276 165 0 chr13 112470282 112470452 -7813860 + B3 SINE B2 2 199 -17 1 1443 717 93 229 0 chr13 112470595 112470713 -7813599 - B1_Mus1 SINE Alu -2 146 2 1 1443 3366 140 28 0 chr13 112470845 112471410 -7812902 + MT2B LTR ERVL 1 581 -20 1 1443 253 275 14 0 chr13 112471624 112471693 -7812619 - ID4_ SINE ID -10 73 4 1 1443 780 150 269 0 chr13 112471759 112471926 -7812386 - B3 SINE B2 -4 212 1 1 1443 426 122 33 148 chr13 112472018 112472201 -7812111 - RMER17C LTR ERVK -136 274 113 1 1443 285 51 0 0 chr13 112472211 112472250 -7812062 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 1 1443 1056 86 14 0 chr13 112472250 112472390 -7811922 - B1_Mus1 SINE Alu -5 143 2 1 1443 1144 82 0 0 chr13 112472417 112472564 -7811748 - B1_Mus2 SINE Alu 0 147 1 1 1443 1187 36 0 0 chr13 112473152 112473289 -7811023 - B1_Mus2 SINE Alu -10 137 1 1 1443 234 0 0 0 chr13 112476201 112476227 -7808085 + (TCCC)n Simple_repeat Simple_repeat 2 27 0 1 1443 23 108 0 0 chr13 112476312 112476405 -7807907 + GC_rich Low_complexity Low_complexity 1 93 0 1 1443 219 88 0 0 chr13 112476454 112476488 -7807824 + (CGG)n Simple_repeat Simple_repeat 2 35 0 1 1443 285 213 16 79 chr13 112476672 112476861 -7807451 + (CGGGG)n Simple_repeat Simple_repeat 1 177 0 1 1443 228 223 39 47 chr13 112476773 112476900 -7807412 + (CCGGG)n Simple_repeat Simple_repeat 3 128 0 1 1443 28 0 0 0 chr13 112478384 112478412 -7805900 + AT_rich Low_complexity Low_complexity 1 28 0 1 1443 522 0 0 0 chr13 112478962 112479020 -7805292 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1443 866 34 94 0 chr13 112479020 112479137 -7805175 - B1_Mus2 SINE Alu -18 129 2 1 1443 245 292 31 92 chr13 112479519 112479662 -7804650 - MIR3 SINE MIR -15 193 46 1 1443 1002 52 7 0 chr13 112480389 112480525 -7803787 - B1_Mus1 SINE Alu -1 147 11 1 1443 1065 45 7 29 chr13 112480622 112480760 -7803552 + B1_Mus1 SINE Alu 2 136 -12 1 1443 285 29 0 0 chr13 112480760 112480794 -7803518 + (CAAA)n Simple_repeat Simple_repeat 4 37 0 1 1443 227 350 0 0 chr13 112480985 112481065 -7803247 - ID4_ SINE ID 0 83 4 1 1443 381 278 55 19 chr13 112482420 112482541 -7801771 + B1F SINE Alu 1 124 -25 1 1443 1185 48 0 7 chr13 112483420 112483566 -7800746 - B1_Mus2 SINE Alu -2 145 1 1 1443 3289 16 0 0 chr13 112484442 112484809 -7799503 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1443 46521 17 1 2 chr13 112484809 112489934 -7794378 - IAPEz-int LTR ERVK 0 6481 1359 1 1443 3478 82 13 14 chr13 112489934 112490663 -7793649 - IAPEz-int LTR ERVK -5819 662 8 1 1443 3289 16 0 0 chr13 112490663 112491030 -7793282 - IAPLTR1_Mm LTR ERVK 0 367 1 1 1443 200 214 202 0 chr13 112491734 112491818 -7792494 + L2 LINE L2 2369 2469 -950 1 1443 292 300 99 14 chr13 112492033 112492175 -7792137 - RSINE1 SINE B4 -2 163 10 1 1443 1438 60 5 21 chr13 112494146 112494335 -7789977 - B2_Mm1a SINE B2 -6 187 2 1 1443 391 127 128 1 chr13 112494819 112494914 -7789398 + L1Md_F3 LINE L1 6471 6566 -18 1 1443 249 299 11 33 chr13 112494990 112495080 -7789232 - PB1 SINE Alu -19 108 21 1 1443 28 79 0 0 chr13 112495213 112495276 -7789036 + AT_rich Low_complexity Low_complexity 1 63 0 1 1443 413 257 71 76 chr13 112496360 112496558 -7787754 + B3A SINE B2 2 198 0 1 1443 215 282 93 39 chr13 112496584 112496713 -7787599 + B3A SINE B2 59 194 -4 1 1443 211 104 42 0 chr13 112497985 112498033 -7786279 + (TTTTTA)n Simple_repeat Simple_repeat 1 50 0 1 1443 301 181 66 53 chr13 112498686 112498732 -7785580 - B4A SINE B4 -13 279 230 1 1443 955 29 69 55 chr13 112498732 112498877 -7785435 - B1_Mm SINE Alu 0 147 1 1 1443 301 181 66 53 chr13 112498877 112498906 -7785406 - B4A SINE B4 -63 229 203 1 1443 1366 60 55 0 chr13 112499043 112499225 -7785087 + B2_Mm1t SINE B2 1 192 -1 1 1443 264 319 93 17 chr13 112499296 112499414 -7784898 + ID_B1 SINE B4 84 210 -14 1 1443 233 188 42 0 chr13 112499586 112499634 -7784678 + B4A SINE B4 227 276 -16 1 1443 254 194 218 77 chr13 112499716 112499794 -7784518 - PB1D9 SINE Alu -31 89 1 1 1443 489 206 148 30 chr13 112500318 112500453 -7783859 + RSINE1 SINE B4 3 153 -12 1 1443 351 260 72 72 chr13 112501181 112501376 -7782936 + B4 SINE B4 48 242 -50 2 1443 367 300 119 0 chr13 112501558 112501718 -7782594 - B3A SINE B2 -17 181 3 3 1443 365 109 16 0 chr13 112501724 112501788 -7782524 + (TG)n Simple_repeat Simple_repeat 1 65 0 4 1443 599 165 197 17 chr13 112502621 112502738 -7781574 - B1_Mur1 SINE Alu -5 144 7 5 1443 263 202 474 4 chr13 112502780 112503014 -7781298 - L1MC LINE L1 -1479 4667 4324 6 1443 413 244 112 22 chr13 112503062 112503196 -7781116 - B1F SINE Alu -1 148 3 7 1443 233 222 119 127 chr13 112503196 112503250 -7781062 - MT2B LTR ERVL -430 171 119 8 1443 233 318 108 9 chr13 112503274 112503385 -7780927 + B1F1 SINE Alu 16 137 -12 9 1443 237 282 129 0 chr13 112503302 112503387 -7780925 - B1F2 SINE Alu -8 141 46 1 1443 324 283 52 21 chr13 112503658 112503772 -7780540 - L2a LINE L2 -31 3395 3256 1 1443 24 53 0 0 chr13 112505818 112505856 -7778456 + AT_rich Low_complexity Low_complexity 1 38 0 1 1443 279 79 0 0 chr13 112506102 112506140 -7778172 + (T)n Simple_repeat Simple_repeat 1 38 0 1 1443 26 30 0 0 chr13 112506686 112506719 -7777593 + AT_rich Low_complexity Low_complexity 1 33 0 1 1443 806 82 205 0 chr13 112508862 112508984 -7775328 - B1_Mus2 SINE Alu 0 147 1 1 1443 429 149 130 60 chr13 112509840 112509940 -7774372 + B1_Mur2 SINE Alu 10 116 -33 1 1443 325 234 179 21 chr13 112510690 112510830 -7773482 + B3A SINE B2 1 162 -36 1 1443 784 95 264 0 chr13 112510900 112511048 -7773264 + B2_Mm2 SINE B2 2 188 -7 1 1443 183 42 0 0 chr13 112511320 112511344 -7772968 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1 1443 1150 68 0 20 chr13 112511450 112511599 -7772713 + B1_Mus2 SINE Alu 2 147 0 2 1443 22 35 0 0 chr13 112511915 112511944 -7772368 + AT_rich Low_complexity Low_complexity 1 29 0 2 1443 1212 55 7 0 chr13 112511944 112512089 -7772223 + B1_Mus2 SINE Alu 2 147 0 2 1443 468 215 37 0 chr13 112512177 112512284 -7772028 - PB1D10 SINE Alu -6 111 1 2 1443 1207 34 0 27 chr13 112513390 112513540 -7770772 - B1_Mus2 SINE Alu -1 146 1 2 1443 1176 99 12 0 chr13 112513883 112514045 -7770267 + B2_Mm2 SINE B2 2 165 -30 2 1443 180 0 0 0 chr13 112514719 112514739 -7769573 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2 1443 584 217 190 6 chr13 112516387 112516545 -7767767 - B3 SINE B2 -6 210 24 2 1443 242 250 101 108 chr13 112516641 112516789 -7767523 - L1MA10 LINE L1 -1 6333 6187 2 1443 357 219 133 19 chr13 112516879 112517037 -7767275 - L1M4 LINE L1 -2349 3797 3622 2 1443 1221 106 55 152 chr13 112517137 112517210 -7767102 + RMER4A LTR ERVK 11 64 -402 3 1443 1286 100 10 26 chr13 112517210 112517405 -7766907 + B2_Mm2 SINE B2 1 192 -3 3 1443 1221 106 55 152 chr13 112517405 112517586 -7766726 + RMER4A LTR ERVK 65 240 -226 3 1443 1697 144 99 0 chr13 112517586 112517878 -7766434 + ORR1A4 LTR MaLR 1 321 -8 3 1443 1178 178 87 23 chr13 112517881 112518100 -7766212 + RMER4A LTR ERVK 234 466 0 3 1443 3414 179 69 1 chr13 112518100 112518777 -7765535 + MurERV4-int LTR ERVK 1 723 -4537 3 1443 2007 132 261 47 chr13 112518890 112519357 -7764955 + RLTR6_Mm LTR ERV1 37 603 -51 3 1443 66818 31 14 0 chr13 112519358 112527027 -7757285 + RLTR6-int LTR ERV1 1 7778 0 3 1443 1968 127 269 48 chr13 112527140 112527594 -7756718 + RLTR6_Mm LTR ERV1 37 590 -64 3 1443 1863 166 56 9 chr13 112527594 112527930 -7756382 + MurERV4-int LTR ERVK 726 1078 -4182 3 1443 1091 81 0 33 chr13 112527930 112528068 -7756244 + B1_Mus1 SINE Alu 1 138 -10 3 1443 279 0 0 0 chr13 112528068 112528099 -7756213 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1443 1091 81 0 33 chr13 112528099 112528113 -7756199 + B1_Mus1 SINE Alu 139 148 0 3 1443 1272 81 35 0 chr13 112528128 112528300 -7756012 + B2_Mm1t SINE B2 2 179 -14 3 1443 470 75 322 116 chr13 112528312 112528433 -7755879 + B2_Mm2 SINE B2 47 192 -3 3 1443 1239 48 0 0 chr13 112528439 112528585 -7755727 + B1_Mus2 SINE Alu 2 147 0 3 1443 198 0 0 0 chr13 112528585 112528607 -7755705 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1443 2471 188 26 42 chr13 112528607 112529108 -7755204 + MurERV4-int LTR ERVK 1066 1558 -3702 3 1443 321 197 0 0 chr13 112529109 112529175 -7755137 + CT-rich Low_complexity Low_complexity 5 70 0 4 1443 273 152 63 23 chr13 112529176 112529263 -7755049 - B2_Mm2 SINE B2 -1 194 104 4 1443 2764 118 48 0 chr13 112529263 112529679 -7754633 + MurERV4-int LTR ERVK 1934 2369 -2891 3 1443 1135 67 60 0 chr13 112529683 112529833 -7754479 + B2_Mm2 SINE B2 4 162 -33 4 1443 191 36 36 0 chr13 112529833 112529861 -7754451 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 4 1443 1179 154 58 79 chr13 112529862 112530063 -7754249 + MurERV4-int LTR ERVK 2360 2567 -2693 3 1443 1228 48 0 7 chr13 112530063 112530211 -7754101 + B1_Mus2 SINE Alu 1 147 0 4 1443 185 0 40 0 chr13 112530214 112530239 -7754073 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1443 1179 154 58 79 chr13 112530239 112530273 -7754039 + MurERV4-int LTR ERVK 2568 2594 -2666 3 1443 2071 160 86 54 chr13 112530266 112530297 -7754015 + MurERV4-int LTR ERVK 4804 4834 -426 3 1443 1249 117 16 11 chr13 112530297 112530487 -7753825 + B2_Mm1t SINE B2 2 192 -1 4 1443 2071 160 86 54 chr13 112530487 112530589 -7753723 + MurERV4-int LTR ERVK 4835 4932 -328 3 1443 1160 51 0 0 chr13 112530589 112530727 -7753585 + B1_Mus1 SINE Alu 1 138 -10 4 1443 399 21 0 0 chr13 112530727 112530775 -7753537 + (CAAAA)n Simple_repeat Simple_repeat 2 49 0 4 1443 2071 160 86 54 chr13 112530775 112531059 -7753253 + MurERV4-int LTR ERVK 4933 5238 -22 3 1443 1941 103 86 10 chr13 112531059 112531363 -7752949 - ORR1A4 LTR MaLR -2 327 1 5 1443 2071 160 86 54 chr13 112531363 112531384 -7752928 + MurERV4-int LTR ERVK 5239 5258 -2 3 1443 2214 166 75 34 chr13 112531397 112531839 -7752473 + RMER4A LTR ERVK 7 466 0 3 1443 383 302 38 30 chr13 112531868 112532001 -7752311 - MER91B DNA Tip100 -28 162 29 5 1443 23 33 0 0 chr13 112532815 112532845 -7751467 + AT_rich Low_complexity Low_complexity 1 30 0 5 1443 331 348 123 42 chr13 112532933 112533194 -7751118 - B4 SINE B4 -2 290 9 5 1443 520 103 20 10 chr13 112533206 112533304 -7751008 + (TTCC)n Simple_repeat Simple_repeat 3 101 0 5 1443 1394 135 13 18 chr13 112533362 112533588 -7750724 + URR1B DNA MER1_type 1 225 0 5 1443 639 0 0 0 chr13 112533618 112533689 -7750623 + (TC)n Simple_repeat Simple_repeat 2 72 0 5 1443 25 0 0 0 chr13 112533884 112533909 -7750403 + AT_rich Low_complexity Low_complexity 1 25 0 5 1443 1440 67 17 0 chr13 112534305 112534483 -7749829 + B2_Mm2 SINE B2 1 181 -14 5 1443 749 209 157 6 chr13 112534501 112534679 -7749633 + B3 SINE B2 2 206 -10 5 1443 587 284 158 53 chr13 112534806 112535148 -7749164 + MT2A LTR ERVL 126 503 -30 6 1443 245 274 23 35 chr13 112535315 112535402 -7748910 - L1MC4 LINE L1 -1171 6871 6786 6 1443 5833 39 9 36 chr13 112535822 112536602 -7747710 - L1Md_F2 LINE L1 0 6582 5831 6 1443 26 50 0 0 chr13 112536719 112536759 -7747553 + AT_rich Low_complexity Low_complexity 1 40 0 6 1443 207 0 0 0 chr13 112537640 112537663 -7746649 + (TA)n Simple_repeat Simple_repeat 1 23 0 6 1443 309 82 0 0 chr13 112538629 112538678 -7745634 + (A)n Simple_repeat Simple_repeat 1 49 0 6 1443 253 260 88 38 chr13 112539459 112539539 -7744773 - B1F2 SINE Alu -60 89 6 6 1443 280 260 55 0 chr13 112539470 112539543 -7744769 - ID_B1 SINE B4 -65 159 83 6 1443 535 176 39 0 chr13 112540017 112540119 -7744193 + PB1D9 SINE Alu 1 106 -14 6 1443 243 244 0 131 chr13 112540145 112540244 -7744068 + B4A SINE B4 6 91 -201 6 1443 492 72 0 0 chr13 112540379 112540448 -7743864 + (CA)n Simple_repeat Simple_repeat 1 69 0 7 1443 637 176 9 0 chr13 112540455 112540563 -7743749 + B3 SINE B2 108 216 0 7 1443 1133 65 0 0 chr13 112542053 112542192 -7742120 + B1_Mus1 SINE Alu 1 139 -9 7 1443 448 250 55 24 chr13 112542844 112542971 -7741341 + B4A SINE B4 160 290 -2 6 1443 380 167 146 55 chr13 112543206 112543303 -7741009 - PB1D10 SINE Alu -8 119 21 7 1443 1429 109 5 0 chr13 112543464 112543656 -7740656 - B2_Mm1t SINE B2 0 193 1 7 1443 336 247 12 12 chr13 112543682 112543764 -7740548 + ID4 SINE ID 2 83 0 7 1443 180 278 72 72 chr13 112543959 112544056 -7740256 - L3 LINE CR1 -2328 2161 2065 7 1443 432 224 41 0 chr13 112544604 112544702 -7739610 + B1F1 SINE Alu 2 103 -46 7 1443 315 0 0 0 chr13 112544702 112544737 -7739575 + (CAAAC)n Simple_repeat Simple_repeat 2 36 0 7 1443 448 331 23 8 chr13 112548782 112548913 -7735399 + RSINE1 SINE B4 5 137 -28 7 1443 234 128 0 0 chr13 112548947 112548986 -7735326 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 8 1443 323 330 45 0 chr13 112549398 112549510 -7734802 + MTE2a LTR MaLR 17 133 -246 8 1443 271 233 24 131 chr13 112549523 112549607 -7734705 + MTE2a LTR MaLR 170 244 -135 8 1443 270 282 17 38 chr13 112549624 112549720 -7734592 + MTE2a LTR MaLR 281 393 -26 8 1443 389 294 219 82 chr13 112550617 112550850 -7733462 - B4 SINE B4 0 292 28 8 1443 644 146 21 0 chr13 112550864 112550960 -7733352 - 7SLRNA srpRNA srpRNA -191 123 26 8 1443 283 344 10 0 chr13 112551114 112551210 -7733102 + MTEb LTR MaLR 56 152 -227 8 1443 471 261 106 0 chr13 112551225 112551386 -7732926 + MTEb LTR MaLR 198 375 -4 8 1443 1375 82 16 0 chr13 112551565 112551747 -7732565 + B2_Mm2 SINE B2 5 189 -6 8 1443 254 51 0 49 chr13 112553502 112553543 -7730769 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 8 1443 501 179 31 10 chr13 112553543 112553639 -7730673 - PB1D10 SINE Alu -12 105 8 8 1443 389 143 0 16 chr13 112554551 112554615 -7729697 - B1_Mur4 SINE Alu -84 66 4 8 1443 307 312 21 21 chr13 112554615 112554643 -7729669 - B4A SINE B4 -139 150 59 8 1443 1190 49 0 0 chr13 112555014 112555156 -7729156 - B1_Mus2 SINE Alu -5 142 1 9 1443 394 281 47 0 chr13 112555486 112555614 -7728698 - B1F SINE Alu -15 134 1 9 1443 40 49 0 0 chr13 112555959 112556020 -7728292 + AT_rich Low_complexity Low_complexity 1 61 0 9 1443 901 82 110 7 chr13 112556204 112556340 -7727972 + B1_Mur4 SINE Alu 1 150 0 9 1443 1189 189 5 32 chr13 112556463 112556682 -7727630 - B3 SINE B2 -3 213 1 9 1443 427 305 41 28 chr13 112559104 112559249 -7725063 + B1F1 SINE Alu 1 147 -2 9 1443 513 115 0 0 chr13 112559328 112559406 -7724906 + (CA)n Simple_repeat Simple_repeat 1 78 0 9 1443 416 193 22 11 chr13 112560344 112560433 -7723879 + L1M4 LINE L1 5621 5710 -468 9 1443 437 289 62 67 chr13 112560485 112560635 -7723677 - MER57D LTR ERV1 -41 370 215 9 1443 531 0 0 0 chr13 112560635 112560694 -7723618 + (TG)n Simple_repeat Simple_repeat 1 59 0 9 1443 437 289 62 67 chr13 112560694 112560751 -7723561 - MER57D LTR ERV1 -197 214 164 9 1443 1218 305 123 70 chr13 112561289 112561518 -7722794 - Charlie1a DNA MER1_type -277 1178 958 1 1443 510 254 147 26 chr13 112561518 112561708 -7722604 - B3 SINE B2 0 216 4 1 1443 1218 305 123 70 chr13 112561708 112562301 -7722011 - Charlie1a DNA MER1_type -498 957 313 1 1443 227 351 0 0 chr13 112562551 112562628 -7721684 - Charlie1a DNA MER1_type -1342 113 37 1 1443 229 370 12 12 chr13 112563489 112563571 -7720741 + ID4 SINE ID 2 83 0 1 1443 527 266 68 37 chr13 112563899 112564090 -7720222 - B3A SINE B2 0 198 2 1 1443 391 261 112 9 chr13 112564114 112564230 -7720082 - RSINE1 SINE B4 -35 130 3 1 1443 25 31 0 0 chr13 112564418 112564450 -7719862 + AT_rich Low_complexity Low_complexity 1 32 0 1 1443 220 27 0 51 chr13 112567227 112567266 -7717046 + (CAAAA)n Simple_repeat Simple_repeat 3 39 0 1 1443 354 277 106 0 chr13 112568532 112568673 -7715639 + MER104 DNA Tc2 11 166 -15 1 1443 24 32 0 0 chr13 112569449 112569480 -7714832 + AT_rich Low_complexity Low_complexity 1 31 0 1 1443 303 28 0 0 chr13 112569622 112569658 -7714654 + (CA)n Simple_repeat Simple_repeat 1 36 0 1 1443 227 244 152 13 chr13 112570592 112570671 -7713641 + ID_B1 SINE B4 81 170 -54 1 1443 358 194 0 40 chr13 112570614 112570689 -7713623 + PB1D10 SINE Alu 34 105 -12 1 1443 264 77 0 0 chr13 112570689 112570728 -7713584 + (TC)n Simple_repeat Simple_repeat 2 40 0 1 1443 1252 41 0 7 chr13 112571498 112571646 -7712666 - B1_Mus1 SINE Alu 0 148 2 1 1443 841 199 0 33 chr13 112572129 112572280 -7712032 + B1_Mur1 SINE Alu 1 146 -3 1 1443 375 268 140 25 chr13 112572307 112572464 -7711848 + B4A SINE B4 1 175 -117 1 1443 204 398 0 0 chr13 112572655 112572758 -7711554 + (TG)n Simple_repeat Simple_repeat 2 104 0 1 1443 354 306 79 119 chr13 112572791 112573069 -7711243 - B4A SINE B4 -18 274 8 1 1443 22 0 0 0 chr13 112573684 112573706 -7710606 + AT_rich Low_complexity Low_complexity 1 22 0 1 1443 205 278 200 40 chr13 112575826 112575901 -7708411 + MIR SINE MIR 22 108 -154 1 1443 207 367 80 35 chr13 112576160 112576273 -7708039 - MIRb SINE MIR -146 122 5 1 1443 218 189 0 0 chr13 112576273 112576310 -7708002 + (TATATG)n Simple_repeat Simple_repeat 3 39 0 1 1443 302 240 131 28 chr13 112577152 112577259 -7707053 - ID_B1 SINE B4 0 224 107 1 1443 247 184 281 44 chr13 112577160 112577274 -7707038 - B1_Mur2 SINE Alu -8 141 1 1 1443 329 0 24 0 chr13 112577485 112577526 -7706786 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1443 375 105 0 0 chr13 112577576 112577633 -7706679 + (TG)n Simple_repeat Simple_repeat 2 58 0 1 1443 823 204 7 0 chr13 112577641 112577788 -7706524 - B3 SINE B2 -68 148 1 1 1443 310 247 160 11 chr13 112579224 112579318 -7704994 - B3 SINE B2 -22 194 87 1 1443 381 22 0 0 chr13 112580401 112580447 -7703865 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1443 524 325 123 18 chr13 112580447 112580791 -7703521 - L1MA4 LINE L1 -379 5933 5540 1 1443 233 304 11 115 chr13 112580791 112580863 -7703449 - MER21B LTR ERV1 -486 377 286 1 1443 255 250 0 0 chr13 112580863 112580919 -7703393 - PB1D7 SINE Alu 0 120 65 1 1443 538 255 62 28 chr13 112580870 112581015 -7703297 - ID_B1 SINE B4 -7 217 68 1 1443 233 304 11 115 chr13 112580919 112580973 -7703339 - MER21B LTR ERV1 -486 285 215 1 1443 314 230 138 69 chr13 112581015 112581174 -7703138 - L1MA4 LINE L1 -866 5425 5256 1 1443 301 198 127 10 chr13 112581301 112581408 -7702904 - L1MA4 LINE L1 -1131 5012 4850 1 1443 217 255 0 21 chr13 112581686 112581734 -7702578 + ID2 SINE ID 1 47 -36 1 1443 225 296 70 0 chr13 112582315 112582386 -7701926 + L2b LINE L2 3251 3326 -49 1 1443 1269 84 0 0 chr13 112583969 112584221 -7700091 + (TG)n Simple_repeat Simple_repeat 1 252 0 1 1443 201 39 0 0 chr13 112584464 112584490 -7699822 + (CCAA)n Simple_repeat Simple_repeat 2 27 0 1 1443 989 41 8 0 chr13 112585061 112585184 -7699128 + B1_Mus1 SINE Alu 25 148 0 1 1443 744 162 73 20 chr13 112585906 112586057 -7698255 - URR1A DNA MER1_type -22 204 46 1 1443 562 230 80 20 chr13 112586079 112586230 -7698082 - ID_B1 SINE B4 -63 161 2 1 1443 279 0 0 0 chr13 112586978 112587009 -7697303 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1443 365 264 43 21 chr13 112587011 112587104 -7697208 - PB1D10 SINE Alu -15 102 8 1 1443 180 0 0 0 chr13 112587190 112587210 -7697102 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1 1443 248 367 51 46 chr13 112589511 112589728 -7694584 + L1MC LINE L1 5410 5627 -2255 1 1443 246 174 0 0 chr13 112589770 112589816 -7694496 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1443 329 206 41 0 chr13 112590155 112590228 -7694084 + ID4 SINE ID 7 82 -1 1 1443 314 261 76 0 chr13 112590228 112590247 -7694065 + ID_B1 SINE B4 7 105 -119 1 1443 231 36 0 0 chr13 112590261 112590289 -7694023 + (TCTG)n Simple_repeat Simple_repeat 1 28 0 1 1444 206 194 0 16 chr13 112594145 112594208 -7690104 + CT-rich Low_complexity Low_complexity 2 63 0 1 1444 21 0 0 0 chr13 112594620 112594641 -7689671 + AT_rich Low_complexity Low_complexity 1 21 0 1 1444 22 0 0 0 chr13 112594746 112594768 -7689544 + GC_rich Low_complexity Low_complexity 1 22 0 1 1444 222 216 0 0 chr13 112595089 112595126 -7689186 - ID4 SINE ID -11 72 36 1 1444 348 83 0 0 chr13 112595544 112595592 -7688720 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 1444 237 128 0 0 chr13 112596555 112596602 -7687710 + (A)n Simple_repeat Simple_repeat 1 47 0 1 1444 33 25 0 0 chr13 112598309 112598349 -7685963 + GC_rich Low_complexity Low_complexity 1 40 0 1 1444 30 100 0 0 chr13 112598682 112598782 -7685530 + GC_rich Low_complexity Low_complexity 1 100 0 1 1444 239 248 13 46 chr13 112598977 112599129 -7685183 + (CCG)n Simple_repeat Simple_repeat 3 149 0 1 1444 197 119 24 0 chr13 112599235 112599277 -7685035 + (CGGG)n Simple_repeat Simple_repeat 4 46 0 1 1444 236 187 0 108 chr13 112599284 112599386 -7684926 + G-rich Low_complexity Low_complexity 1 91 0 1 1444 31 26 0 0 chr13 112599588 112599626 -7684686 + GC_rich Low_complexity Low_complexity 1 38 0 1 1444 201 241 0 0 chr13 112600898 112600952 -7683360 + GA-rich Low_complexity Low_complexity 2 55 0 1 1444 31 61 0 35 chr13 112601845 112601930 -7682382 + AT_rich Low_complexity Low_complexity 1 82 0 1 1444 402 193 22 0 chr13 112602057 112602146 -7682166 + PB1D9 SINE Alu 2 97 -50 1 1444 483 191 21 43 chr13 112602660 112602753 -7681559 - B1_Mur2 SINE Alu -17 132 42 1 1444 263 254 0 33 chr13 112602781 112602842 -7681470 - PB1D9 SINE Alu -61 59 1 1 1444 334 312 36 18 chr13 112602946 112603057 -7681255 - PB1D9 SINE Alu -2 118 6 1 1444 235 230 225 61 chr13 112603143 112603356 -7680956 - Charlie5 DNA MER1_type -6 2618 2371 1 1444 926 162 133 57 chr13 112603395 112603605 -7680707 + URR1A DNA MER1_type 1 226 0 1 1444 335 296 43 50 chr13 112604331 112604470 -7679842 - B1F1 SINE Alu -7 142 5 1 1444 228 35 0 0 chr13 112604601 112604630 -7679682 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1444 1233 48 7 0 chr13 112604635 112604781 -7679531 - B1_Mus2 SINE Alu 0 147 1 1 1444 549 314 114 102 chr13 112604812 112605074 -7679238 - Zaphod DNA Tip100 -3138 893 636 1 1444 963 88 0 155 chr13 112605074 112605248 -7679064 - B1_Mur3 SINE Alu -1 148 2 1 1444 549 314 114 102 chr13 112605248 112605339 -7678973 - Zaphod DNA Tip100 -3396 635 547 1 1444 897 229 9 74 chr13 112605339 112605570 -7678742 - B3 SINE B2 0 216 1 1 1444 549 314 114 102 chr13 112605570 112605981 -7678331 - Zaphod DNA Tip100 -3485 546 119 1 1444 241 276 17 0 chr13 112606023 112606081 -7678231 - MER115 DNA Tip100 -634 59 1 1 1444 189 273 0 18 chr13 112606081 112606137 -7678175 - L2b LINE L2 -24 3351 3297 1 1444 950 155 0 4 chr13 112606510 112606738 -7677574 + (TG)n Simple_repeat Simple_repeat 1 226 0 1 1444 816 232 98 47 chr13 112606739 112607015 -7677297 - B4A SINE B4 -1 291 2 1 1444 724 318 62 4 chr13 112607499 112607742 -7676570 - MIR SINE MIR -4 258 2 1 1444 516 16 0 0 chr13 112608987 112609048 -7675264 + (TC)n Simple_repeat Simple_repeat 1 61 0 1 1444 549 44 0 0 chr13 112609225 112609293 -7675019 + (CATATA)n Simple_repeat Simple_repeat 1 68 0 1 1444 304 287 35 53 chr13 112609897 112610011 -7674301 + ORR1E LTR MaLR 26 137 -222 1 1444 248 311 45 64 chr13 112610173 112610283 -7674029 + ORR1E LTR MaLR 272 379 0 1 1444 442 225 22 11 chr13 112610740 112610830 -7673482 - ID_B1 SINE B4 -8 216 126 1 1444 331 342 72 0 chr13 112610896 112611048 -7673264 - RSINE1 SINE B4 -1 164 2 1 1444 839 219 27 45 chr13 112611074 112611124 -7673188 - B3 SINE B2 0 216 171 1 1444 285 29 0 0 chr13 112611124 112611158 -7673154 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1444 839 219 27 45 chr13 112611158 112611327 -7672985 - B3 SINE B2 -46 170 1 1 1444 225 0 0 0 chr13 112612260 112612285 -7672027 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1 1444 217 343 9 81 chr13 112613469 112613580 -7670732 + MIR SINE MIR 88 190 -72 1 1444 1196 168 14 5 chr13 112613914 112614136 -7670176 - URR1B DNA MER1_type 0 225 2 1 1444 235 96 39 0 chr13 112614812 112614864 -7669448 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 1 1444 667 62 21 0 chr13 112614879 112614976 -7669336 + (TC)n Simple_repeat Simple_repeat 2 100 0 1 1444 1022 30 0 0 chr13 112614979 112615110 -7669202 - B1_Mus2 SINE Alu -5 142 12 1 1444 1125 109 0 0 chr13 112615942 112616237 -7668075 + (CA)n Simple_repeat Simple_repeat 1 295 0 1 1444 1661 250 102 37 chr13 112616245 112616935 -7667377 + L1MA4 LINE L1 4682 5413 -758 1 1444 1286 149 14 5 chr13 112616940 112617155 -7667157 - URR1B DNA MER1_type -2 223 7 1 1444 295 283 111 7 chr13 112617226 112617379 -7666933 + L1MA4 LINE L1 5753 5921 -379 1 1444 328 272 22 0 chr13 112617650 112617742 -7666570 + B4A SINE B4 2 95 -197 1 1444 1021 201 174 7 chr13 112617744 112618019 -7666293 - MTD LTR MaLR -87 332 12 1 1444 1278 85 0 0 chr13 112618037 112618214 -7666098 + (GAGAA)n Simple_repeat Simple_repeat 4 180 0 1 1444 266 180 0 0 chr13 112618324 112618374 -7665938 - ID_B1 SINE B4 -1 223 174 1 1444 243 216 161 54 chr13 112618584 112618677 -7665635 - B1F SINE Alu -14 135 33 1 1444 747 189 0 0 chr13 112618732 112619003 -7665309 + (TG)n Simple_repeat Simple_repeat 1 271 0 2 1444 939 319 51 24 chr13 112619012 112619336 -7664976 - L1M4 LINE L1 -421 5763 5426 2 1444 188 35 35 0 chr13 112619336 112619365 -7664947 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2 1444 1162 71 0 0 chr13 112619365 112619505 -7664807 - B1_Mus2 SINE Alu -7 140 1 2 1444 939 319 51 24 chr13 112619505 112619594 -7664718 - L1M4 LINE L1 -759 5425 5339 2 1444 767 106 0 16 chr13 112620218 112620343 -7663969 + (TCCC)n Simple_repeat Simple_repeat 4 126 0 2 1444 594 221 0 0 chr13 112620364 112620477 -7663835 - PB1D7 SINE Alu -5 115 3 2 1444 880 259 30 60 chr13 112620511 112620811 -7663501 + B4A SINE B4 1 291 -1 2 1444 469 303 51 17 chr13 112620942 112621120 -7663192 - MER5A DNA MER1_type 0 189 6 2 1444 934 98 0 7 chr13 112621180 112621324 -7662988 + URR1B DNA MER1_type 83 225 0 2 1444 766 259 61 52 chr13 112622310 112622334 -7661978 + B3 SINE B2 2 16 -200 2 1444 1158 182 13 18 chr13 112622334 112622558 -7661754 - URR1B DNA MER1_type -2 223 1 2 1444 766 259 61 52 chr13 112622558 112622745 -7661567 + B3 SINE B2 17 215 -1 2 1444 21 0 0 0 chr13 112623017 112623038 -7661274 + AT_rich Low_complexity Low_complexity 1 21 0 2 1444 517 274 37 7 chr13 112623421 112623557 -7660755 + B3A SINE B2 1 140 -58 2 1444 249 33 0 0 chr13 112623606 112623636 -7660676 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1444 201 333 115 19 chr13 112623901 112624057 -7660255 + MIR SINE MIR 28 198 -64 2 1444 25 31 0 0 chr13 112624193 112624225 -7660087 + AT_rich Low_complexity Low_complexity 1 32 0 2 1444 330 45 0 0 chr13 112624245 112624289 -7660023 + (TG)n Simple_repeat Simple_repeat 2 45 0 2 1444 261 0 0 0 chr13 112625218 112625247 -7659065 + (A)n Simple_repeat Simple_repeat 1 29 0 2 1444 279 173 0 0 chr13 112625464 112625516 -7658796 + (TTA)n Simple_repeat Simple_repeat 2 53 0 2 1444 907 257 30 0 chr13 112625516 112625718 -7658594 - ID_B1 SINE B4 -14 210 3 2 1444 23 0 0 0 chr13 112625730 112625753 -7658559 + AT_rich Low_complexity Low_complexity 1 23 0 2 1444 1896 161 33 52 chr13 112625782 112626149 -7658163 - RMER1C Other Other -8 1334 975 2 1444 456 285 0 0 chr13 112626167 112626290 -7658022 - B1_Mur2 SINE Alu -22 127 5 2 1444 2642 62 0 12 chr13 112626491 112626836 -7657476 - Lx LINE L1 -6 6648 6308 2 1444 499 254 67 34 chr13 112627387 112627566 -7656746 + MER5A DNA MER1_type 1 185 -4 2 1444 189 0 0 0 chr13 112627923 112627944 -7656368 + (G)n Simple_repeat Simple_repeat 1 21 0 2 1444 3097 41 13 13 chr13 112629151 112629544 -7654768 - L1Md_F2 LINE L1 0 6582 6190 2 1444 227 152 22 0 chr13 112629611 112629657 -7654655 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1444 1473 192 137 68 chr13 112629677 112630174 -7654138 - RMER4B LTR ERVK -35 550 20 2 1444 296 77 0 19 chr13 112630266 112630319 -7653993 + (CAAA)n Simple_repeat Simple_repeat 1 52 0 2 1444 289 291 146 0 chr13 112630733 112630836 -7653476 - RSINE1 SINE B4 -28 137 20 2 1444 1540 155 40 48 chr13 112631400 112631865 -7652447 + RMER17C LTR ERVK 16 439 -519 2 1444 896 155 21 0 chr13 112631912 112632054 -7652258 - B1_Mus1 SINE Alu 0 148 4 2 1444 547 230 143 13 chr13 112632142 112632296 -7652016 + MTD LTR MaLR 102 275 -144 2 1444 319 255 95 11 chr13 112632330 112632425 -7651887 + MTD LTR MaLR 10 112 -307 2 1444 468 237 83 26 chr13 112632424 112632580 -7651732 + MTD LTR MaLR 255 419 0 2 1444 251 243 40 0 chr13 112632585 112632659 -7651653 + MTD LTR MaLR 343 419 0 2 1444 306 0 0 0 chr13 112632792 112632826 -7651486 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 2 1444 25 0 0 0 chr13 112633205 112633230 -7651082 + AT_rich Low_complexity Low_complexity 1 25 0 2 1444 316 252 30 0 chr13 112633499 112633598 -7650714 + L1MB3 LINE L1 6037 6138 -45 2 1444 282 244 253 37 chr13 112633602 112633764 -7650548 + B3A SINE B2 2 198 0 2 1444 34 0 0 22 chr13 112633772 112633790 -7650522 + AT_rich Low_complexity Low_complexity 1 18 0 2 1444 1241 41 0 0 chr13 112633790 112633937 -7650375 + B1_Mus2 SINE Alu 1 147 0 2 1444 34 0 0 22 chr13 112633937 112633963 -7650349 + AT_rich Low_complexity Low_complexity 1 26 0 2 1444 251 191 172 16 chr13 112633974 112634038 -7650274 + B1F2 SINE Alu 57 130 -19 2 1444 23 0 0 0 chr13 112634569 112634592 -7649720 + AT_rich Low_complexity Low_complexity 1 23 0 2 1444 555 237 225 5 chr13 112634602 112634793 -7649519 - Lx8 LINE L1 -28 7445 7213 2 1444 746 171 20 33 chr13 112634955 112635106 -7649206 - B1_Mur4 SINE Alu -1 149 1 2 1444 992 110 7 0 chr13 112635211 112635347 -7648965 - B1_Mus1 SINE Alu -9 139 3 2 1444 2580 197 83 105 chr13 112637357 112638167 -7646145 - Lx7 LINE L1 0 7696 6905 2 1444 28 0 0 0 chr13 112638840 112638868 -7645444 + AT_rich Low_complexity Low_complexity 1 28 0 2 1444 494 298 25 0 chr13 112638893 112639051 -7645261 - RSINE1 SINE B4 0 165 4 2 1444 186 118 0 0 chr13 112639135 112639169 -7645143 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1444 462 132 0 0 chr13 112640035 112640111 -7644201 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 1444 579 306 130 8 chr13 112640145 112640399 -7643913 - B4A SINE B4 -7 285 1 2 1444 231 305 81 40 chr13 112641118 112641217 -7643095 + MIRb SINE MIR 39 141 -127 2 1444 441 0 0 0 chr13 112641890 112641939 -7642373 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 2 1444 830 196 77 5 chr13 112641939 112642134 -7642178 + MTD LTR MaLR 18 226 -193 2 1444 346 297 112 26 chr13 112642264 112642496 -7641816 - MLT1H1 LTR MaLR -321 234 18 2 1444 497 284 143 14 chr13 112643548 112643630 -7640682 - L1MC1 LINE L1 -9 6324 6239 2 1444 432 0 0 0 chr13 112643630 112643678 -7640634 + (TTAGGG)n Simple_repeat Simple_repeat 2 49 0 2 1444 497 284 143 14 chr13 112643678 112643874 -7640438 - L1MC1 LINE L1 -95 6238 6011 2 1444 26 30 0 0 chr13 112644137 112644170 -7640142 + AT_rich Low_complexity Low_complexity 1 33 0 2 1444 504 48 0 0 chr13 112644664 112644727 -7639585 + (GA)n Simple_repeat Simple_repeat 1 63 0 2 1444 396 59 0 0 chr13 112644727 112644778 -7639534 + (GGA)n Simple_repeat Simple_repeat 2 52 0 2 1444 609 324 61 35 chr13 112644829 112645174 -7639138 + ORR1E LTR MaLR 6 359 0 2 1444 882 228 6 0 chr13 112645554 112645734 -7638578 + B3 SINE B2 2 182 -34 2 1444 225 361 25 64 chr13 112645868 112646025 -7638287 - L2b LINE L2 -1 3374 3224 2 1444 663 287 50 42 chr13 112646289 112646702 -7637610 - MLT2B4 LTR ERVL -71 496 2 2 1444 278 333 93 11 chr13 112647650 112647832 -7636480 - MLT1L LTR MaLR -6 604 408 2 1444 939 252 61 13 chr13 112648472 112648701 -7635611 - Lx9 LINE L1 -806 6838 6599 2 1444 291 54 0 0 chr13 112648800 112648837 -7635475 + (TAAAAA)n Simple_repeat Simple_repeat 6 42 0 2 1444 292 244 23 0 chr13 112648843 112648929 -7635383 + Charlie1a DNA MER1_type 1362 1449 -6 2 1444 22 35 0 0 chr13 112649220 112649249 -7635063 + AT_rich Low_complexity Low_complexity 1 29 0 2 1444 880 189 212 159 chr13 112649628 112649981 -7634331 - ORR1D1 LTR MaLR -2 372 1 2 1444 377 269 86 9 chr13 112650375 112650491 -7633821 + RSINE1 SINE B4 2 126 -39 2 1444 180 0 0 0 chr13 112650509 112650529 -7633783 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 2 1444 329 274 31 79 chr13 112650893 112651020 -7633292 + PB1D10 SINE Alu 7 127 -21 2 1444 1315 180 143 29 chr13 112652075 112652436 -7631876 - MTD LTR MaLR -8 411 1 2 1444 321 276 35 0 chr13 112652442 112652529 -7631783 + B1F SINE Alu 53 142 -7 2 1444 250 286 116 0 chr13 112652628 112652740 -7631572 + MER5A1 DNA MER1_type 34 158 -8 2 1444 411 113 0 0 chr13 112653012 112653074 -7631238 + (TA)n Simple_repeat Simple_repeat 2 63 0 2 1444 731 295 186 24 chr13 112653113 112653813 -7630499 - L1MB5 LINE L1 -49 6125 5295 2 1444 297 128 0 0 chr13 112653813 112653860 -7630452 + (ATTG)n Simple_repeat Simple_repeat 1 47 0 2 1444 846 177 23 0 chr13 112653862 112653992 -7630320 - B1_Mur2 SINE Alu -15 134 2 2 1444 610 335 93 42 chr13 112653992 112654524 -7629788 - L1MB5 LINE L1 -846 5294 4746 2 1444 1165 74 0 7 chr13 112654585 112654734 -7629578 + B1_Mus1 SINE Alu 1 148 0 2 1444 1864 140 77 36 chr13 112655021 112655384 -7628928 - ORR1C1 LTR MaLR 0 378 1 2 1444 535 285 37 37 chr13 112655408 112655572 -7628740 - RSINE1 SINE B4 0 165 2 2 1444 269 265 30 30 chr13 112655606 112655707 -7628605 - MTEa LTR MaLR 0 379 279 2 1444 243 0 0 0 chr13 112655945 112655972 -7628340 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2 1444 742 237 11 34 chr13 112657137 112657299 -7627013 + B3A SINE B2 8 166 -32 2 1444 1160 100 0 16 chr13 112657299 112657482 -7626830 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1444 742 237 11 34 chr13 112657482 112657498 -7626814 + B3A SINE B2 167 182 -16 2 1444 351 0 0 0 chr13 112657839 112657878 -7626434 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1444 294 50 0 0 chr13 112658972 112659012 -7625300 + (TGG)n Simple_repeat Simple_repeat 3 42 0 2 1444 243 307 35 49 chr13 112662522 112662666 -7621646 + MER5B DNA MER1_type 33 174 -4 2 1444 1094 88 0 0 chr13 112662903 112663050 -7621262 - B1_Mus1 SINE Alu 0 148 2 2 1444 1437 101 36 5 chr13 112664013 112664233 -7620079 - Lx2 LINE L1 -6 6991 6765 2 1444 601 60 119 0 chr13 112664222 112664306 -7620006 - Lx2 LINE L1 -352 6645 6552 2 1444 22 0 0 0 chr13 112665774 112665796 -7618516 + AT_rich Low_complexity Low_complexity 1 22 0 2 1444 242 73 24 0 chr13 112665889 112665930 -7618382 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2 1444 834 78 0 0 chr13 112665931 112666047 -7618265 - B1_Mus1 SINE Alu -2 146 31 2 1444 1142 108 43 16 chr13 112666047 112666235 -7618077 - L1_Mus3 LINE L1 -12 6626 6434 2 1444 407 336 76 59 chr13 112666781 112667041 -7617271 + MLT1A0 LTR MaLR 97 390 0 2 1444 334 291 103 15 chr13 112667167 112667303 -7617009 - L2a LINE L2 -5 3421 3274 2 1444 229 288 37 24 chr13 112667303 112667385 -7616927 + Lx8 LINE L1 7389 7471 -2 3 1444 783 169 0 0 chr13 112667478 112667782 -7616530 + CT-rich Low_complexity Low_complexity 1 304 0 3 1444 317 219 0 12 chr13 112667785 112667868 -7616444 + (TCTCTG)n Simple_repeat Simple_repeat 3 84 0 3 1444 239 136 0 17 chr13 112667870 112667930 -7616382 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 3 1444 217 342 13 27 chr13 112667937 112668012 -7616300 - ID4 SINE ID -8 75 2 3 1444 364 233 14 0 chr13 112668046 112668119 -7616193 - ID4 SINE ID -5 78 5 3 1444 605 211 40 32 chr13 112668125 112668281 -7616031 - B1F1 SINE Alu 0 311 1 3 1444 1252 245 16 47 chr13 112668435 112668497 -7615815 - Lx8 LINE L1 -824 6649 6588 3 1444 2177 153 93 5 chr13 112668497 112668884 -7615428 + MTC LTR MaLR 1 421 0 3 1444 1252 245 16 47 chr13 112668884 112669138 -7615174 - Lx8 LINE L1 -886 6587 6343 3 1444 604 174 0 0 chr13 112669138 112669230 -7615082 + (CAG)n Simple_repeat Simple_repeat 2 93 0 3 1444 3473 328 90 39 chr13 112669231 112670009 -7614303 - Lx8 LINE L1 -1116 6357 5549 3 1444 840 194 117 56 chr13 112670009 112670222 -7614090 + URR1A DNA MER1_type 1 226 0 3 1444 3473 292 78 17 chr13 112670222 112670525 -7613787 - Lx8 LINE L1 -332 5548 5205 3 1444 5099 138 66 23 chr13 112670525 112671390 -7612922 - RMER19B LTR ERVK 0 902 1 3 1444 3473 292 78 17 chr13 112671390 112672181 -7612131 - Lx8 LINE L1 -676 5204 4375 3 1444 26 0 0 0 chr13 112672181 112672207 -7612105 + AT_rich Low_complexity Low_complexity 1 26 0 3 1444 702 226 128 11 chr13 112672208 112672396 -7611916 - B3 SINE B2 -1 215 6 3 1444 207 88 0 0 chr13 112672427 112672461 -7611851 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1444 814 256 5 0 chr13 112673940 112674131 -7610181 + B3 SINE B2 3 194 -22 3 1444 2077 265 88 18 chr13 112674626 112675387 -7608925 - L1M2 LINE L1 -1774 4369 3556 3 1444 21 0 0 0 chr13 112675538 112675559 -7608753 + AT_rich Low_complexity Low_complexity 1 21 0 3 1444 858 189 0 0 chr13 112676640 112676815 -7607497 + (TG)n Simple_repeat Simple_repeat 2 176 0 3 1444 1118 0 0 0 chr13 112677064 112677185 -7607127 - L1_Mm LINE L1 -1699 4184 4064 3 1444 756 126 8 8 chr13 112677159 112677279 -7607033 + L1Md_T LINE L1 5467 5586 -297 3 1444 8588 34 0 0 chr13 112677279 112678275 -7606037 + L1Md_T LINE L1 5587 6582 0 3 1444 469 66 0 0 chr13 112678280 112678341 -7605971 + L1_Mus3 LINE L1 5783 5843 -795 3 1444 23 0 0 0 chr13 112678341 112678364 -7605948 + AT_rich Low_complexity Low_complexity 1 23 0 3 1444 1570 61 0 28 chr13 112678528 112678746 -7605566 + L1Md_F2 LINE L1 6371 6582 0 3 1444 1141 226 36 100 chr13 112679016 112679405 -7604907 - MTE2a LTR MaLR 0 379 16 3 1444 270 0 0 0 chr13 112679894 112679924 -7604388 + (TG)n Simple_repeat Simple_repeat 2 31 0 3 1444 492 86 0 0 chr13 112679961 112680031 -7604281 + (CA)n Simple_repeat Simple_repeat 2 71 0 3 1444 21 0 0 0 chr13 112680205 112680226 -7604086 + AT_rich Low_complexity Low_complexity 1 21 0 3 1444 213 196 0 0 chr13 112680237 112680283 -7604029 + GA-rich Low_complexity Low_complexity 2 47 0 3 1444 221 366 17 59 chr13 112680305 112680424 -7603888 + PB1 SINE Alu 11 124 -3 3 1444 383 269 0 0 chr13 112680456 112680549 -7603763 + B1_Mur1 SINE Alu 50 142 -7 3 1444 303 91 0 0 chr13 112680830 112680874 -7603438 + HAL1-3A_ME LINE L1 1969 2012 -846 3 1444 327 25 0 0 chr13 112680913 112680953 -7603359 + (CA)n Simple_repeat Simple_repeat 2 41 0 3 1444 180 0 0 0 chr13 112680987 112681007 -7603305 + (CA)n Simple_repeat Simple_repeat 2 21 0 3 1444 631 229 0 37 chr13 112681606 112681742 -7602570 + B1F SINE Alu 18 148 -1 3 1444 1101 83 0 14 chr13 112681913 112682060 -7602252 - B1_Mus1 SINE Alu -2 146 2 3 1444 180 0 0 0 chr13 112682257 112682277 -7602035 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 3 1444 490 143 10 10 chr13 112683123 112683149 -7601163 + polypyrimidine Low_complexity Low_complexity 75 99 0 3 1444 1020 125 0 0 chr13 112683149 112683309 -7601003 + (TTC)n Simple_repeat Simple_repeat 3 162 0 3 1444 490 143 10 10 chr13 112683309 112683381 -7600931 + polypyrimidine Low_complexity Low_complexity 2 74 0 3 1444 201 196 20 0 chr13 112684147 112684198 -7600114 + (TA)n Simple_repeat Simple_repeat 1 52 0 3 1444 290 164 91 0 chr13 112684544 112684599 -7599713 - Lx9 LINE L1 -261 7383 7324 3 1444 532 223 216 10 chr13 112684597 112684805 -7599507 + Lx9 LINE L1 7386 7636 -8 3 1444 279 141 0 0 chr13 112685198 112685262 -7599050 + (TCC)n Simple_repeat Simple_repeat 1 64 0 3 1444 207 0 0 0 chr13 112685599 112685622 -7598690 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3 1444 262 128 0 49 chr13 112685619 112685681 -7598631 + A-rich Low_complexity Low_complexity 3 61 0 3 1444 262 0 53 0 chr13 112685681 112685719 -7598593 + (CAAAC)n Simple_repeat Simple_repeat 5 44 0 3 1444 262 128 0 49 chr13 112685719 112685738 -7598574 + A-rich Low_complexity Low_complexity 62 80 0 3 1444 248 175 0 34 chr13 112686261 112686320 -7597992 + C-rich Low_complexity Low_complexity 5 61 0 3 1444 761 249 172 27 chr13 112686859 112687190 -7597122 - MTEa LTR MaLR 0 379 1 3 1444 311 100 57 0 chr13 112687458 112687528 -7596784 + (CA)n Simple_repeat Simple_repeat 1 74 0 3 1444 953 87 41 0 chr13 112687542 112687714 -7596598 + (CA)n Simple_repeat Simple_repeat 1 179 0 3 1444 506 167 20 0 chr13 112690274 112690376 -7593936 + (TATATG)n Simple_repeat Simple_repeat 2 105 0 3 1444 333 125 0 0 chr13 112690546 112690602 -7593710 + (TG)n Simple_repeat Simple_repeat 1 56 0 3 1444 343 288 70 155 chr13 112690612 112690788 -7593524 - B4 SINE B4 -44 248 84 3 1444 414 0 0 0 chr13 112690788 112690834 -7593478 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 3 1444 501 312 32 7 chr13 112690835 112690990 -7593322 - RSINE1 SINE B4 -4 161 3 3 1444 343 288 70 155 chr13 112690990 112691082 -7593230 - B4 SINE B4 -209 83 1 3 1444 832 272 47 32 chr13 112692453 112692730 -7591582 + B4 SINE B4 12 292 0 3 1444 473 44 0 14 chr13 112692740 112692809 -7591503 + (CA)n Simple_repeat Simple_repeat 1 68 0 3 1444 396 0 0 0 chr13 112692984 112693028 -7591284 + (TTA)n Simple_repeat Simple_repeat 2 45 0 3 1444 379 258 30 87 chr13 112693165 112693374 -7590938 - MTE2a LTR MaLR -1 378 204 3 1444 605 247 162 5 chr13 112693673 112693864 -7590448 + ID_B1 SINE B4 2 222 -2 3 1444 864 67 0 0 chr13 112694488 112694607 -7589705 + B1_Mus2 SINE Alu 29 147 0 3 1444 1203 41 0 26 chr13 112694724 112694875 -7589437 - B1_Mm SINE Alu 0 147 1 3 1444 231 33 0 0 chr13 112694875 112694899 -7589413 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1444 215 189 0 19 chr13 112695895 112695949 -7588363 + CT-rich Low_complexity Low_complexity 4 56 0 3 1444 8575 33 7 0 chr13 112696213 112697591 -7586721 - L1Md_F2 LINE L1 0 6582 5195 3 1444 287 295 173 37 chr13 112698100 112698262 -7586050 + MER5A DNA MER1_type 3 186 -3 3 1444 327 321 43 5 chr13 112698407 112698595 -7585717 + ORSL-2b DNA Tip100 174 368 -140 3 1444 234 0 0 0 chr13 112699404 112699430 -7584882 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1444 298 274 74 19 chr13 112699594 112699702 -7584610 - MLT1A LTR MaLR -258 116 3 3 1444 414 242 125 0 chr13 112699754 112699882 -7584430 - B1F1 SINE Alu -1 148 5 3 1444 259 356 30 0 chr13 112699913 112700045 -7584267 + MIR3 SINE MIR 23 158 -50 3 1444 580 147 307 0 chr13 112701130 112701280 -7583032 - ORR1D1 LTR MaLR -174 200 5 3 1444 548 294 0 0 chr13 112701840 112701983 -7582329 - B1F2 SINE Alu -6 143 1 3 1444 1955 151 21 52 chr13 112702970 112703355 -7580957 + ORR1D1 LTR MaLR 1 373 -1 3 1444 271 286 12 38 chr13 112704085 112704165 -7580147 + MIR3 SINE MIR 120 197 -11 3 1444 213 347 0 0 chr13 112705467 112705542 -7578770 - MIRb SINE MIR -77 191 117 3 1444 939 224 48 38 chr13 112706212 112706421 -7577891 - ID_B1 SINE B4 -13 211 1 3 1444 221 353 55 82 chr13 112706492 112706674 -7577638 - MER5B DNA MER1_type 0 178 2 3 1444 992 231 71 89 chr13 112707354 112707748 -7576564 + MTC-int LTR MaLR 768 1154 -104 3 1444 539 192 72 13 chr13 112707723 112707876 -7576436 + MTC-int LTR MaLR 1061 1222 -36 3 1444 2211 159 42 12 chr13 112707884 112708291 -7576021 + MTD LTR MaLR 1 419 0 3 1444 241 239 239 0 chr13 112709246 112709363 -7574949 - MLT1A0 LTR MaLR 0 408 264 3 1444 356 289 39 0 chr13 112709460 112709564 -7574748 - B1F1 SINE Alu -21 128 21 3 1444 186 43 0 0 chr13 112709584 112709607 -7574705 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 3 1444 938 62 138 0 chr13 112709609 112709739 -7574573 - B1_Mus1 SINE Alu 0 148 1 3 1444 1517 128 23 113 chr13 112709774 112710127 -7574185 + RLTRETN_Mm LTR ERVK 1 321 -1 3 1444 362 260 9 28 chr13 112710129 112710236 -7574076 - MLT1A0 LTR MaLR -240 125 21 3 1444 253 221 84 71 chr13 112710245 112710363 -7573949 + MIRm SINE MIR 100 225 -43 3 1444 198 0 0 0 chr13 112710921 112710943 -7573369 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1444 1938 141 133 31 chr13 112711978 112712360 -7571952 + MTC LTR MaLR 1 421 0 3 1444 2247 86 0 142 chr13 112713014 112713394 -7570918 - ORR1A2 LTR MaLR 0 327 2 3 1444 843 138 0 0 chr13 112713624 112713762 -7570550 + (TA)n Simple_repeat Simple_repeat 1 138 0 3 1444 237 214 18 18 chr13 112713775 112713832 -7570480 + (TATG)n Simple_repeat Simple_repeat 4 60 0 3 1444 1635 296 6 32 chr13 112713847 112714342 -7569970 - Lx9 LINE L1 -757 6887 6406 3 1444 327 179 0 0 chr13 112714498 112714565 -7569747 + CT-rich Low_complexity Low_complexity 2 68 0 3 1444 380 340 80 72 chr13 112715982 112716470 -7567842 - L1ME3B LINE L1 -119 6121 5630 3 1444 288 338 0 0 chr13 112718015 112718095 -7566217 - ID4 SINE ID -2 81 2 3 1444 214 225 161 12 chr13 112719638 112719719 -7564593 + MIR SINE MIR 58 150 -112 3 1444 489 243 156 0 chr13 112719793 112719966 -7564346 + L1MA4 LINE L1 5586 5785 -512 3 1444 781 194 0 0 chr13 112719969 112720103 -7564209 + Lx9 LINE L1 6805 6938 -706 3 1444 329 275 118 14 chr13 112720115 112720259 -7564053 + L1MA4 LINE L1 5769 5927 -229 3 1444 710 303 80 99 chr13 112720669 112721222 -7563090 + L2 LINE L2 2187 2728 -691 3 1444 1102 98 159 40 chr13 112721266 112721467 -7562845 + URR1B DNA MER1_type 1 225 0 3 1445 180 0 0 0 chr13 112722158 112722178 -7562134 + (TGGGGG)n Simple_repeat Simple_repeat 5 24 0 3 1445 450 0 0 0 chr13 112723205 112723255 -7561057 + (TC)n Simple_repeat Simple_repeat 1 50 0 4 1445 360 0 0 0 chr13 112723255 112723294 -7561018 + (CA)n Simple_repeat Simple_repeat 1 40 0 4 1445 580 203 59 0 chr13 112723345 112723463 -7560849 + B3A SINE B2 1 125 -73 4 1445 459 0 0 0 chr13 112724335 112724386 -7559926 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1445 750 284 9 53 chr13 112724387 112724614 -7559698 - B4 SINE B4 -49 243 27 4 1445 258 105 0 0 chr13 112724662 112724700 -7559612 + (CACG)n Simple_repeat Simple_repeat 1 38 0 4 1445 423 83 0 0 chr13 112725170 112725230 -7559082 + (GAAA)n Simple_repeat Simple_repeat 1 60 0 4 1445 401 259 105 120 chr13 112725543 112725819 -7558493 - L1ME2z LINE L1 -318 6126 5855 4 1445 918 127 35 0 chr13 112725886 112726028 -7558284 + B1_Mus1 SINE Alu 2 148 0 4 1445 321 26 0 0 chr13 112726029 112726067 -7558245 + (CAGT)n Simple_repeat Simple_repeat 4 41 0 4 1445 200 35 35 0 chr13 112726067 112726095 -7558217 + (CCTG)n Simple_repeat Simple_repeat 2 31 0 4 1445 236 202 258 0 chr13 112726175 112726264 -7558048 - MIR SINE MIR -60 148 37 4 1445 415 322 110 5 chr13 112726722 112726922 -7557390 + LFSINE_Vert SINE SINE 67 287 -172 4 1445 225 0 0 0 chr13 112727275 112727300 -7557012 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1445 477 0 0 0 chr13 112728007 112728060 -7556252 + (CA)n Simple_repeat Simple_repeat 2 54 0 4 1445 660 197 0 8 chr13 112728249 112728372 -7555940 + MTC LTR MaLR 300 421 0 4 1445 626 264 32 42 chr13 112728372 112728560 -7555752 + ID_B1 SINE B4 33 218 -6 4 1445 219 288 0 17 chr13 112728761 112728821 -7555491 + CT-rich Low_complexity Low_complexity 3 61 0 4 1445 180 77 0 0 chr13 112729129 112729155 -7555157 + (TGGGGG)n Simple_repeat Simple_repeat 6 31 0 4 1445 326 226 137 0 chr13 112729550 112729652 -7554660 - PB1D10 SINE Alu -1 116 1 4 1445 273 119 0 0 chr13 112729863 112729905 -7554407 + (CCTG)n Simple_repeat Simple_repeat 2 43 0 4 1445 200 191 24 0 chr13 112731036 112731078 -7553234 + L3 LINE CR1 3790 3832 -657 4 1445 348 273 0 20 chr13 112731554 112731655 -7552657 + PB1D10 SINE Alu 18 116 -1 4 1445 351 254 21 69 chr13 112731733 112731877 -7552435 + ORR1E LTR MaLR 1 137 -222 4 1445 1883 209 102 8 chr13 112731971 112732450 -7551862 - MT2A LTR ERVL -9 524 1 4 1445 863 203 311 40 chr13 112732540 112732894 -7551418 - Lx9 LINE L1 -1 7643 7194 4 1445 195 298 0 0 chr13 112733109 112733193 -7551119 + (TG)n Simple_repeat Simple_repeat 1 84 0 4 1445 1018 235 43 35 chr13 112733227 112733509 -7550803 - B4A SINE B4 0 292 9 4 1445 254 95 24 0 chr13 112733630 112733672 -7550640 + (GAAA)n Simple_repeat Simple_repeat 2 44 0 4 1445 240 344 40 16 chr13 112734984 112735108 -7549204 + MLT1K LTR MaLR 269 395 -200 4 1445 1124 184 56 41 chr13 112735112 112735378 -7548934 + MTD LTR MaLR 4 273 -146 4 1445 358 311 0 48 chr13 112736356 112736481 -7547831 - PB1D7 SINE Alu -1 119 1 4 1445 300 127 0 0 chr13 112736824 112736879 -7547433 + (GGA)n Simple_repeat Simple_repeat 1 55 0 4 1445 212 303 11 43 chr13 112736879 112736972 -7547340 + L2b LINE L2 3271 3360 -15 4 1445 206 216 0 150 chr13 112737884 112737944 -7546368 + MIRc SINE MIR 95 145 -123 4 1445 248 28 56 0 chr13 112739104 112739140 -7545172 + (TTTTA)n Simple_repeat Simple_repeat 2 39 0 4 1445 192 322 34 22 chr13 112739159 112739248 -7545064 - L2 LINE L2 -543 2876 2787 4 1445 181 408 56 0 chr13 112739368 112739493 -7544819 - MIRb SINE MIR -115 153 22 4 1445 630 309 82 29 chr13 112740115 112740528 -7543784 - RLTR12B LTR ERVK -47 481 47 4 1445 469 288 135 48 chr13 112741027 112741257 -7543055 - L1MC1 LINE L1 -77 6267 6018 4 1445 415 250 0 3 chr13 112741333 112741456 -7542856 - B1_Mur2 SINE Alu 0 149 29 4 1445 3602 31 28 9 chr13 112742120 112742545 -7541767 + RLTR10C LTR ERVK 1 433 -3 4 1445 479 292 113 37 chr13 112743492 112743897 -7540415 - MLT2B1 LTR ERVL -21 546 11 4 1445 222 255 0 0 chr13 112744373 112744424 -7539888 + C-rich Low_complexity Low_complexity 6 56 0 4 1445 635 298 81 54 chr13 112745221 112745590 -7538722 + MER63D DNA AcHobo 59 437 -624 4 1445 448 260 0 0 chr13 112745621 112745725 -7538587 + PB1D10 SINE Alu 1 104 -13 4 1445 1001 184 442 24 chr13 112746612 112746906 -7537406 - MTC LTR MaLR -3 418 1 4 1445 1319 67 0 6 chr13 112747719 112747899 -7536413 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 4 1445 1211 28 0 0 chr13 112747901 112748042 -7536270 - B1_Mm SINE Alu -6 141 1 4 1445 501 296 100 68 chr13 112748165 112748476 -7535836 - MTEb LTR MaLR 0 379 59 4 1445 607 313 12 0 chr13 112748498 112748661 -7535651 - ID_B1 SINE B4 -58 166 2 4 1445 386 276 0 79 chr13 112748969 112748981 -7535331 + MT2B LTR ERVL 153 155 -446 4 1445 742 197 0 0 chr13 112748981 112749108 -7535204 + B1_Mus2 SINE Alu 1 127 -20 4 1445 22 35 0 0 chr13 112750317 112750346 -7533966 + AT_rich Low_complexity Low_complexity 1 29 0 4 1445 711 282 50 0 chr13 112750355 112750557 -7533755 - B3 SINE B2 0 216 5 4 1445 472 233 138 0 chr13 112750710 112750826 -7533486 - ID_B1 SINE B4 -8 216 85 4 1445 482 0 17 0 chr13 112752066 112752124 -7532188 + (GA)n Simple_repeat Simple_repeat 1 59 0 4 1445 2278 231 94 9 chr13 112752182 112752758 -7531554 + Lx7 LINE L1 6803 7427 -269 4 1445 297 0 0 0 chr13 112752767 112752800 -7531512 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 4 1445 297 0 0 0 chr13 112752870 112752903 -7531409 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 4 1445 312 27 0 0 chr13 112752969 112753006 -7531306 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 4 1445 1072 86 0 0 chr13 112753007 112753146 -7531166 - B1_Mus1 SINE Alu -9 139 1 4 1445 231 114 0 0 chr13 112754941 112754976 -7529336 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 4 1445 245 196 0 0 chr13 112755017 112755068 -7529244 - ID4 SINE ID -14 69 19 4 1445 24 0 0 0 chr13 112755103 112755127 -7529185 + AT_rich Low_complexity Low_complexity 1 24 0 4 1445 1261 50 28 0 chr13 112755291 112755470 -7528842 + B2_Mm2 SINE B2 8 191 -4 4 1445 252 0 0 0 chr13 112755991 112756019 -7528293 + (A)n Simple_repeat Simple_repeat 1 28 0 4 1445 324 48 0 0 chr13 112756023 112756065 -7528247 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1445 369 62 0 0 chr13 112757188 112757236 -7527076 + (TA)n Simple_repeat Simple_repeat 2 49 0 4 1445 228 100 0 0 chr13 112757374 112757414 -7526898 + (T)n Simple_repeat Simple_repeat 1 40 0 4 1445 263 311 57 40 chr13 112759520 112759644 -7524668 + ORR1E LTR MaLR 1 126 -233 4 1445 288 0 0 0 chr13 112759827 112759859 -7524453 + (ATTG)n Simple_repeat Simple_repeat 1 32 0 4 1445 596 283 33 0 chr13 112759859 112760011 -7524301 - RSINE1 SINE B4 -6 159 3 4 1445 320 297 74 52 chr13 112760174 112760188 -7524124 - B3A SINE B2 -7 191 181 4 1445 636 33 33 0 chr13 112760188 112760279 -7524033 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 4 1445 320 297 74 52 chr13 112760279 112760399 -7523913 - B3A SINE B2 -18 180 54 4 1445 225 108 0 0 chr13 112760660 112760697 -7523615 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4 1445 341 312 87 6 chr13 112761004 112761165 -7523147 + L1MC LINE L1 3881 4054 -2092 4 1445 348 252 284 38 chr13 112761924 112762122 -7522190 - L1MCc LINE L1 -4558 2479 2237 4 1445 1575 188 82 31 chr13 112762122 112762478 -7521834 + ORR1D1 LTR MaLR 1 374 0 4 1445 348 252 284 38 chr13 112762478 112762596 -7521716 - L1MCc LINE L1 -4801 2236 2085 4 1445 423 302 153 42 chr13 112762958 112763108 -7521204 - L1MCc LINE L1 -4893 1530 1333 4 1445 504 0 0 0 chr13 112763108 112763164 -7521148 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1445 423 302 153 42 chr13 112763164 112763490 -7520822 - L1MCc LINE L1 -5091 1332 1001 4 1445 824 29 10 0 chr13 112765197 112765300 -7519012 + (GA)n Simple_repeat Simple_repeat 1 104 0 4 1445 497 315 96 17 chr13 112765393 112765784 -7518528 + L1M5 LINE L1 5334 5758 -482 4 1445 184 342 59 34 chr13 112767047 112767165 -7517147 + L2b LINE L2 3242 3362 -13 4 1445 811 257 76 24 chr13 112767363 112767574 -7516738 + Lx8 LINE L1 7104 7325 -148 4 1445 513 235 7 7 chr13 112767574 112767846 -7516466 + (TA)n Simple_repeat Simple_repeat 1 272 0 4 1445 302 276 31 54 chr13 112770965 112771095 -7513217 - MIRc SINE MIR -84 184 58 4 1445 366 205 60 12 chr13 112771557 112771641 -7512671 + RSINE1 SINE B4 4 91 -74 4 1445 180 241 0 0 chr13 112771698 112771756 -7512556 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1445 237 358 13 51 chr13 112771777 112771933 -7512379 + MER45A DNA Tip100 1 150 -28 4 1445 180 179 0 0 chr13 112772517 112772556 -7511756 + (ATG)n Simple_repeat Simple_repeat 3 41 0 4 1445 206 220 0 20 chr13 112772948 112772999 -7511313 + G-rich Low_complexity Low_complexity 3 52 0 4 1445 271 369 49 33 chr13 112773860 112774104 -7510208 - LTR16A1 LTR ERVL 0 456 209 4 1445 285 250 72 42 chr13 112775062 112775229 -7509083 - Lx7 LINE L1 -10 7686 7515 4 1445 207 100 0 0 chr13 112775309 112775339 -7508973 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 4 1445 378 0 0 0 chr13 112775382 112775424 -7508888 + (CA)n Simple_repeat Simple_repeat 2 43 0 4 1445 606 51 0 0 chr13 112775427 112775505 -7508807 + (GA)n Simple_repeat Simple_repeat 1 78 0 4 1445 194 289 65 45 chr13 112775527 112775691 -7508621 - MIR SINE MIR -2 260 106 4 1445 874 264 145 35 chr13 112777675 112777930 -7506382 + B4A SINE B4 9 291 -1 4 1445 306 0 0 0 chr13 112777939 112777973 -7506339 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1445 403 285 50 115 chr13 112778978 112779117 -7505195 + RSINE1 SINE B4 11 140 -25 4 1445 315 49 0 0 chr13 112779120 112779161 -7505151 + (TC)n Simple_repeat Simple_repeat 2 42 0 5 1445 447 266 0 0 chr13 112779328 112779422 -7504890 + PB1D10 SINE Alu 14 107 -10 5 1445 189 74 0 0 chr13 112779456 112779483 -7504829 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 5 1445 860 266 61 19 chr13 112780138 112780399 -7503913 + B4 SINE B4 5 276 -16 5 1445 607 145 0 24 chr13 112781833 112781960 -7502352 + CT-rich Low_complexity Low_complexity 3 126 0 5 1445 918 92 0 0 chr13 112782587 112782717 -7501595 + (GGGAGA)n Simple_repeat Simple_repeat 4 133 0 5 1445 1867 226 124 30 chr13 112782910 112783403 -7500909 - RMER15 LTR ERVL -3 572 34 5 1445 311 281 76 35 chr13 112783669 112783813 -7500499 - MER5A1 DNA MER1_type 0 166 17 5 1445 437 276 65 30 chr13 112783985 112784153 -7500159 - RMER15 LTR ERVL -66 509 336 5 1445 662 152 0 8 chr13 112784949 112785075 -7499237 + CT-rich Low_complexity Low_complexity 4 128 0 5 1445 327 286 38 0 chr13 112786241 112786346 -7497966 - MER5A1 DNA MER1_type -52 114 6 5 1445 490 354 95 48 chr13 112787155 112787555 -7496757 + MLT1N2 LTR MaLR 130 548 -14 5 1445 1337 105 16 0 chr13 112787633 112787823 -7496489 + B2_Mm2 SINE B2 1 193 -2 5 1445 885 280 13 2 chr13 112789298 112789504 -7494808 - ID_B1 SINE B4 -13 211 6 5 1445 822 192 88 23 chr13 112789735 112789906 -7494406 - URR1A DNA MER1_type 0 226 45 5 1445 189 0 0 0 chr13 112789941 112789962 -7494350 + (CA)n Simple_repeat Simple_repeat 1 21 0 5 1445 455 305 53 30 chr13 112790086 112790255 -7494057 + MLT1B LTR MaLR 1 173 -217 5 1445 1179 193 19 0 chr13 112790252 112790464 -7493848 + ID_B1 SINE B4 9 224 0 5 1445 608 284 81 14 chr13 112790458 112790669 -7493643 + MLT1B LTR MaLR 164 388 -2 5 1445 255 369 9 18 chr13 112790768 112790881 -7493431 + MIRb SINE MIR 88 199 -69 5 1445 225 0 0 0 chr13 112791043 112791068 -7493244 + (TGG)n Simple_repeat Simple_repeat 3 27 0 5 1445 330 67 0 0 chr13 112792358 112792403 -7491909 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1445 2217 271 107 45 chr13 112794577 112795084 -7489228 + Lx9 LINE L1 6364 6918 -726 5 1445 2027 141 96 3 chr13 112795084 112795418 -7488894 - ORR1B2 LTR MaLR -2 365 1 5 1445 2217 271 107 45 chr13 112795418 112795740 -7488572 + Lx9 LINE L1 6919 7245 -399 5 1445 335 294 70 64 chr13 112796981 112797152 -7487160 + LTR16A1 LTR ERVL 285 456 0 5 1445 711 0 0 0 chr13 112797585 112797664 -7486648 + (TTC)n Simple_repeat Simple_repeat 2 80 0 5 1445 1042 120 11 0 chr13 112797664 112797839 -7486473 + (TCC)n Simple_repeat Simple_repeat 2 178 0 5 1445 438 20 0 0 chr13 112797867 112797918 -7486394 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1445 1157 236 39 14 chr13 112798038 112798322 -7485990 - B4A SINE B4 -1 291 1 5 1445 199 333 94 0 chr13 112799073 112799190 -7485122 + MIRb SINE MIR 118 245 -23 5 1445 1635 202 56 48 chr13 112799271 112799629 -7484683 - MTD LTR MaLR -17 402 42 5 1445 1562 210 13 69 chr13 112799630 112799938 -7484374 + ORR1D2 LTR MaLR 13 303 -67 5 1445 261 0 0 0 chr13 112799938 112799967 -7484345 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5 1445 1562 210 13 69 chr13 112799967 112800037 -7484275 + ORR1D2 LTR MaLR 304 369 -1 5 1445 434 102 0 14 chr13 112802436 112802506 -7481806 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 5 1445 801 280 36 5 chr13 112803881 112804075 -7480237 + MTE2b LTR MaLR 3 202 -177 5 1445 1998 245 92 116 chr13 112804075 112805039 -7479273 + RMER17B LTR ERVK 1 904 -4 5 1445 2699 104 30 23 chr13 112805043 112805438 -7478874 + MERVK26-int LTR ERVK 2 399 -6520 5 1445 618 229 42 0 chr13 112805440 112805584 -7478728 - RLTR26 LTR ERVK -492 150 1 5 1445 620 201 86 0 chr13 112805584 112805715 -7478597 + MTE2b LTR MaLR 196 338 -41 5 1445 838 299 76 73 chr13 112805875 112806606 -7477706 - L1ME3 LINE L1 -93 6069 5333 5 1445 1452 249 25 19 chr13 112806606 112806974 -7477338 + ORR1D2 LTR MaLR 1 370 0 5 1445 838 299 76 73 chr13 112806974 112807021 -7477291 - L1ME3 LINE L1 -830 5332 5289 5 1445 227 285 93 41 chr13 112807076 112807270 -7477042 - L1ME3 LINE L1 -933 5213 5010 5 1445 376 312 67 87 chr13 112807502 112807819 -7476493 + MTE-int LTR MaLR 1005 1441 -139 5 1445 668 220 63 14 chr13 112807967 112808110 -7476202 + B1_Mur4 SINE Alu 1 150 0 5 1445 260 188 0 15 chr13 112808140 112808205 -7476107 + GA-rich Low_complexity Low_complexity 2 65 0 5 1445 1059 90 12 6 chr13 112808208 112808375 -7475937 + (GGAGAA)n Simple_repeat Simple_repeat 4 171 0 5 1445 534 311 85 42 chr13 112809707 112809966 -7474346 + MLT1F2 LTR MaLR 15 284 -276 5 1445 356 306 27 34 chr13 112810042 112810191 -7474121 - MIRb SINE MIR -8 260 113 5 1445 260 301 40 103 chr13 112810985 112811159 -7473153 + RSINE1 SINE B4 3 165 0 5 1445 635 167 39 0 chr13 112811162 112811368 -7472944 + (CA)n Simple_repeat Simple_repeat 1 214 0 5 1445 1043 62 11 27 chr13 112811380 112811563 -7472749 + (CA)n Simple_repeat Simple_repeat 1 180 0 5 1445 241 187 27 0 chr13 112811574 112811649 -7472663 + (CA)n Simple_repeat Simple_repeat 1 77 0 5 1445 936 228 62 12 chr13 112811784 112812028 -7472284 - L1M5 LINE L1 -468 5656 5401 5 1445 668 234 286 27 chr13 112812534 112812862 -7471450 - MTD LTR MaLR -13 406 1 5 1445 370 382 28 6 chr13 112812975 112813154 -7471158 - MIRb SINE MIR -64 204 22 5 1445 21 0 0 0 chr13 112813301 112813322 -7470990 + GC_rich Low_complexity Low_complexity 1 21 0 5 1445 225 0 0 0 chr13 112814328 112814353 -7469959 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 5 1445 207 417 40 50 chr13 112814681 112814797 -7469515 + L2b LINE L2 3176 3290 -85 5 1445 510 17 0 0 chr13 112814797 112814856 -7469456 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 5 1445 207 417 40 50 chr13 112814856 112814941 -7469371 + L2b LINE L2 3291 3375 0 5 1445 195 396 0 9 chr13 112816357 112816464 -7467848 + L2a LINE L2 3321 3426 0 5 1445 274 344 7 44 chr13 112817279 112817416 -7466896 - MER3 DNA MER1_type 0 209 78 5 1445 711 294 5 0 chr13 112819281 112819468 -7464844 + B3A SINE B2 1 188 -10 5 1445 259 227 30 15 chr13 112819701 112819768 -7464544 + ID SINE ID 8 75 -149 5 1445 228 259 23 34 chr13 112819768 112819789 -7464523 + BC1_Mm scRNA scRNA 8 94 -58 5 1445 575 262 0 59 chr13 112820342 112820512 -7463800 - RSINE1 SINE B4 -2 163 4 5 1445 936 117 0 0 chr13 112820766 112820911 -7463401 + (CATATA)n Simple_repeat Simple_repeat 2 146 0 5 1445 597 295 0 45 chr13 112821573 112821729 -7462583 + B1F1 SINE Alu 1 149 0 5 1445 215 310 138 0 chr13 112822488 112822575 -7461737 - B1F SINE Alu -41 108 10 5 1445 195 65 21 42 chr13 112823249 112823297 -7461015 + (CAAAAA)n Simple_repeat Simple_repeat 2 48 0 5 1445 841 84 36 36 chr13 112824036 112824393 -7459919 + (CA)n Simple_repeat Simple_repeat 1 356 0 5 1445 416 335 55 68 chr13 112824447 112824755 -7459557 - L1ME4a LINE L1 -252 5872 5569 5 1445 251 247 26 64 chr13 112825483 112825561 -7458751 + MTEb LTR MaLR 294 368 -11 5 1445 258 217 0 0 chr13 112826554 112826600 -7457712 + B4A SINE B4 28 73 -219 5 1445 234 324 26 26 chr13 112826676 112826752 -7457560 + RSINE1 SINE B4 82 157 -8 5 1445 2231 239 67 83 chr13 112826822 112827068 -7457244 - RCHARR1 DNA MER1_type -1 973 761 5 1445 603 294 6 16 chr13 112827068 112827251 -7457061 - B3A SINE B2 -16 182 2 5 1445 2231 239 67 83 chr13 112827251 112827471 -7456841 - RCHARR1 DNA MER1_type -214 760 543 5 1445 849 171 20 14 chr13 112827471 112827619 -7456693 - B1_Mur1 SINE Alu 0 149 1 5 1445 2231 239 229 49 chr13 112827619 112828044 -7456268 - RCHARR1 DNA MER1_type -432 542 12 5 1445 270 266 111 25 chr13 112828044 112828206 -7456106 + Lx8 LINE L1 7297 7472 -1 5 1445 321 89 0 0 chr13 112830525 112830570 -7453742 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 5 1445 478 90 13 0 chr13 112830578 112830656 -7453656 - L1_Mus3 LINE L1 -8 6630 6552 5 1445 570 29 0 0 chr13 112830656 112830724 -7453588 + (TTTC)n Simple_repeat Simple_repeat 3 70 0 5 1445 253 386 43 64 chr13 112831077 112831218 -7453094 + ID_B1 SINE B4 83 220 -4 5 1445 281 279 23 11 chr13 112831314 112831401 -7452911 + L1MC5 LINE L1 6694 6781 -1180 5 1445 6966 51 55 8 chr13 112831866 112831895 -7452417 - MusHAL1 LINE L1 -146 2566 2542 5 1445 4374 17 2 0 chr13 112831895 112832376 -7451936 - LTRIS_Mm LTR ERV1 0 482 1 5 1445 6966 51 55 8 chr13 112832376 112833311 -7451001 - MusHAL1 LINE L1 -171 2541 1557 5 1445 303 149 0 29 chr13 112833393 112833462 -7450850 - Lx9 LINE L1 0 7644 7578 5 1445 401 340 73 10 chr13 112833524 112833729 -7450583 + B4A SINE B4 43 260 -32 5 1445 306 50 0 0 chr13 112833765 112833805 -7450507 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1445 261 57 0 0 chr13 112834152 112834187 -7450125 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1445 279 268 98 61 chr13 112835953 112836116 -7448196 - MLT1L LTR MaLR -307 303 135 5 1445 264 338 38 13 chr13 112836281 112836414 -7447898 - MIR SINE MIR -109 159 26 5 1445 277 325 15 45 chr13 112836563 112836695 -7447617 + MIR3 SINE MIR 65 192 -16 5 1445 450 0 0 0 chr13 112837185 112837235 -7447077 + (CACCC)n Simple_repeat Simple_repeat 2 51 0 5 1445 237 269 175 8 chr13 112838533 112838653 -7445659 + MIR3 SINE MIR 30 169 -39 5 1445 331 374 113 54 chr13 112839164 112839517 -7444795 - LTR81A LTR ERV1? -312 1038 665 5 1445 406 330 39 22 chr13 112839837 112840017 -7444295 - MER5A DNA MER1_type 0 189 7 5 1445 227 227 93 0 chr13 112840154 112840229 -7444083 - RLTR22_Mur LTR ERVK -462 1386 1305 5 1445 253 330 46 19 chr13 112841016 112841124 -7443188 - MIRc SINE MIR -126 142 32 5 1445 1134 304 119 41 chr13 112841596 112842107 -7442205 - MLT1E3 LTR MaLR -69 555 5 5 1445 360 0 0 0 chr13 112842864 112842904 -7441408 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1445 334 276 10 48 chr13 112843882 112843985 -7440327 + MLT1E2 LTR MaLR 1 99 -528 5 1445 259 345 0 11 chr13 112844068 112844156 -7440156 + MLT1E2 LTR MaLR 385 471 -34 5 1445 210 91 0 0 chr13 112845102 112845135 -7439177 + (CAGG)n Simple_repeat Simple_repeat 1 33 0 5 1445 413 178 11 22 chr13 112845620 112845712 -7438600 + (TA)n Simple_repeat Simple_repeat 2 92 0 5 1445 1050 167 0 2 chr13 112845713 112846353 -7437959 + (TG)n Simple_repeat Simple_repeat 1 638 0 5 1445 297 232 43 0 chr13 112846723 112846792 -7437520 + ID SINE ID 9 80 -144 5 1445 452 298 164 19 chr13 112846811 112847181 -7437131 + Lx8 LINE L1 5482 5905 -1568 5 1445 207 0 0 0 chr13 112847388 112847411 -7436901 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1445 270 0 0 0 chr13 112847418 112847448 -7436864 + (TG)n Simple_repeat Simple_repeat 2 31 0 6 1445 360 0 0 0 chr13 112848810 112848850 -7435462 + (A)n Simple_repeat Simple_repeat 1 40 0 6 1445 433 232 165 30 chr13 112849402 112849602 -7434710 + MLT1D LTR MaLR 20 246 -259 6 1445 336 142 31 0 chr13 112849622 112849688 -7434624 - MTC LTR MaLR -305 74 1 6 1445 472 204 30 30 chr13 112849688 112849789 -7434523 - B4 SINE B4 -191 101 1 6 1445 251 177 138 46 chr13 112849789 112849844 -7434468 + MER5A1 DNA MER1_type 95 155 -11 6 1445 397 276 0 3 chr13 112850356 112850452 -7433860 + B1F SINE Alu 12 104 -13 6 1445 3279 50 2 12 chr13 112850457 112850859 -7433453 + MTB LTR MaLR 3 400 0 6 1445 1613 181 73 46 chr13 112850859 112851230 -7433082 - ORR1C2 LTR MaLR -3 381 1 6 1445 34 42 0 0 chr13 112851569 112851617 -7432695 + AT_rich Low_complexity Low_complexity 1 48 0 6 1445 1115 70 14 0 chr13 112851617 112851759 -7432553 + B1_Mm SINE Alu 1 144 -3 6 1445 207 0 0 0 chr13 112851759 112851782 -7432530 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 6 1445 22 0 0 0 chr13 112851787 112851809 -7432503 + AT_rich Low_complexity Low_complexity 1 22 0 6 1445 207 0 0 0 chr13 112851910 112851933 -7432379 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 6 1445 256 267 92 143 chr13 112852115 112852416 -7431896 - ORR1E LTR MaLR 0 379 81 6 1445 370 271 18 36 chr13 112852803 112852914 -7431398 + LTR37B LTR ERV1 198 306 -162 6 1446 234 0 0 0 chr13 112853049 112853075 -7431237 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 1446 223 317 79 64 chr13 112853114 112853316 -7430996 + L2c LINE L2 3182 3386 -1 6 1446 248 278 90 30 chr13 112853329 112853429 -7430883 + MER5A1 DNA MER1_type 3 108 -58 6 1446 495 234 26 27 chr13 112853692 112853839 -7430473 - MTEa LTR MaLR -8 371 217 6 1446 464 295 68 45 chr13 112853907 112854127 -7430185 - MTEa LTR MaLR -134 225 1 6 1446 243 0 0 0 chr13 112854842 112854869 -7429443 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1446 269 284 209 29 chr13 112855816 112855921 -7428391 - MIRb SINE MIR -118 150 27 6 1446 230 146 16 141 chr13 112856922 112856986 -7427326 - RLTR25A LTR ERVK -404 699 644 6 1446 492 93 0 0 chr13 112858059 112858134 -7426178 + (TG)n Simple_repeat Simple_repeat 1 75 0 6 1446 564 294 6 73 chr13 112858347 112858553 -7425759 + B3A SINE B2 13 203 -13 6 1446 23 33 0 0 chr13 112858592 112858622 -7425690 + AT_rich Low_complexity Low_complexity 1 30 0 6 1446 296 342 8 100 chr13 112860038 112860168 -7424144 - MER115 DNA Tip100 -528 165 48 6 1446 643 355 60 31 chr13 112860198 112860547 -7423765 - LTR16A LTR ERVL -72 379 21 6 1446 267 330 51 91 chr13 112860558 112860811 -7423501 - MLT2C1 LTR ERVL -2 395 153 6 1446 546 290 70 64 chr13 112862694 112863051 -7421261 + ORR1E LTR MaLR 1 359 0 6 1446 192 353 29 29 chr13 112863656 112863726 -7420586 - MIR SINE MIR -191 71 2 6 1446 270 106 0 0 chr13 112863783 112863830 -7420482 + (GA)n Simple_repeat Simple_repeat 2 48 0 6 1446 414 85 0 0 chr13 112864673 112864732 -7419580 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 6 1446 288 170 0 0 chr13 112864772 112864825 -7419487 + (TG)n Simple_repeat Simple_repeat 2 54 0 6 1446 693 36 0 0 chr13 112865107 112865191 -7419121 + (TCC)n Simple_repeat Simple_repeat 1 84 0 6 1446 1028 31 0 8 chr13 112865312 112865441 -7418871 + (TTCCC)n Simple_repeat Simple_repeat 3 130 0 6 1446 728 347 81 81 chr13 112865539 112866094 -7418218 + MLT1N2 LTR MaLR 8 562 0 6 1446 2104 156 65 100 chr13 112866416 112866878 -7417434 + RLTR41 LTR ERV1 1 446 0 6 1446 344 152 0 0 chr13 112867137 112867203 -7417109 + CT-rich Low_complexity Low_complexity 2 67 0 6 1446 321 136 0 0 chr13 112867206 112867250 -7417062 + B3 SINE B2 44 87 -129 6 1446 1080 115 6 0 chr13 112867245 112867402 -7416910 - URR1A DNA MER1_type -10 216 59 6 1446 198 0 0 0 chr13 112867809 112867831 -7416481 + (TG)n Simple_repeat Simple_repeat 1 22 0 6 1446 240 330 80 66 chr13 112868785 112869071 -7415241 - L3 LINE CR1 -4 4485 4196 6 1446 193 311 0 0 chr13 112869108 112869153 -7415159 + MIR SINE MIR 28 72 -190 6 1446 599 298 192 9 chr13 112869711 112870033 -7414279 + MLT1B LTR MaLR 10 390 0 6 1446 557 311 95 77 chr13 112870878 112871216 -7413096 - ORR1E LTR MaLR -1 358 15 6 1446 285 51 0 0 chr13 112871440 112871479 -7412833 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 6 1446 724 221 15 0 chr13 112871482 112871613 -7412699 - B1_Mur4 SINE Alu -16 134 2 6 1446 2450 138 38 8 chr13 112872942 112873335 -7410977 + MTB_Mm LTR MaLR 3 407 0 6 1446 918 162 7 7 chr13 112873608 112873757 -7410555 + B1_Mur4 SINE Alu 1 149 -1 6 1446 240 211 0 0 chr13 112873758 112873815 -7410497 + A-rich Low_complexity Low_complexity 1 57 0 6 1446 22 0 0 0 chr13 112874704 112874726 -7409586 + AT_rich Low_complexity Low_complexity 1 22 0 6 1446 300 340 41 61 chr13 112877143 112877290 -7407022 - L1MC4a LINE L1 -1984 5898 5755 6 1446 382 208 28 0 chr13 112877319 112877391 -7406921 + RSINE1 SINE B4 46 119 -46 6 1446 216 97 0 0 chr13 112877397 112877428 -7406884 + (CA)n Simple_repeat Simple_repeat 2 32 0 6 1446 233 292 118 59 chr13 112877497 112877701 -7406611 + RLTR21 LTR ERVK 1075 1290 -282 6 1446 263 309 46 40 chr13 112877934 112878109 -7406203 - L1MC4a LINE L1 -2451 5431 5256 6 1446 278 80 20 0 chr13 112878313 112878363 -7405949 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 6 1446 228 135 0 0 chr13 112879214 112879251 -7405061 + (TCCC)n Simple_repeat Simple_repeat 3 39 0 6 1446 959 192 65 10 chr13 112879686 112879886 -7404426 - B3 SINE B2 -4 212 2 6 1446 360 362 73 73 chr13 112880576 112880960 -7403352 - MLT1L LTR MaLR -206 404 21 6 1446 213 175 0 0 chr13 112881677 112881717 -7402595 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1446 910 274 137 22 chr13 112882315 112882629 -7401683 + ORR1E LTR MaLR 5 354 -5 6 1446 585 275 112 40 chr13 112882779 112883153 -7401159 - RMER20B LTR ERVK -58 458 44 6 1446 573 281 106 98 chr13 112883972 112884443 -7399869 + RLTR11B LTR ERVK 3 494 -34 6 1446 498 313 21 77 chr13 112884778 112884972 -7399340 - B3A SINE B2 -1 197 15 6 1446 998 218 81 74 chr13 112885019 112885302 -7399010 + MTEb LTR MaLR 92 376 -3 6 1446 1127 276 109 9 chr13 112886955 112887412 -7396900 - L1MB5 LINE L1 -17 6157 5655 6 1446 723 175 0 0 chr13 112888599 112888876 -7395436 + (TG)n Simple_repeat Simple_repeat 1 277 0 6 1446 310 93 0 0 chr13 112888877 112888920 -7395392 - HAL1-3A_ME LINE L1 -838 2020 1978 6 1446 484 299 8 57 chr13 112888922 112889046 -7395266 - PB1D7 SINE Alu -2 118 1 6 1446 630 287 12 30 chr13 112889162 112889331 -7394981 + ID_B1 SINE B4 39 204 -20 6 1446 312 246 0 0 chr13 112889975 112890097 -7394215 + (TG)n Simple_repeat Simple_repeat 1 122 0 6 1446 200 222 0 0 chr13 112890145 112890181 -7394131 + (CATA)n Simple_repeat Simple_repeat 3 38 0 6 1446 306 0 0 0 chr13 112890590 112890624 -7393688 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1446 687 197 8 0 chr13 112891814 112891936 -7392376 - URR1B DNA MER1_type 0 225 103 6 1446 315 167 0 0 chr13 112892679 112892745 -7391567 + T-rich Low_complexity Low_complexity 1 66 0 6 1446 1166 69 0 7 chr13 112892746 112892892 -7391420 - B1_Mm SINE Alu -1 146 2 6 1446 963 199 99 0 chr13 112893279 112893480 -7390832 - URR1A DNA MER1_type -5 221 1 6 1446 200 98 0 68 chr13 112893894 112893938 -7390374 + (TTTG)n Simple_repeat Simple_repeat 4 44 0 6 1446 186 118 0 0 chr13 112894072 112894106 -7390206 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1446 497 282 0 0 chr13 112895086 112895196 -7389116 - PB1D7 SINE Alu -10 110 1 6 1446 687 75 0 0 chr13 112895321 112895415 -7388897 + (GGAAA)n Simple_repeat Simple_repeat 2 95 0 6 1446 942 260 43 34 chr13 112895834 112896120 -7388192 + MER34 LTR ERV1 11 300 -271 6 1446 507 257 105 7 chr13 112896165 112896318 -7387994 + MER34 LTR ERV1 375 542 0 6 1446 1582 251 64 0 chr13 112897043 112897112 -7387200 - Lx6 LINE L1 -40 7420 7349 6 1446 180 0 0 0 chr13 112897112 112897132 -7387180 + (TCC)n Simple_repeat Simple_repeat 1 20 0 6 1446 1582 251 64 0 chr13 112897132 112897453 -7386859 - Lx6 LINE L1 -112 7348 7007 6 1446 426 85 0 0 chr13 112897800 112897859 -7386453 + (CA)n Simple_repeat Simple_repeat 1 59 0 6 1446 699 279 44 90 chr13 112897926 112898339 -7385973 + L1MB3 LINE L1 5734 6129 -42 6 1446 235 260 46 115 chr13 112898339 112898353 -7385959 + ID4_ SINE ID 2 77 -1 6 1446 240 338 29 0 chr13 112898353 112898421 -7385891 + tRNA-Ala-GCY_ tRNA tRNA 6 75 0 6 1446 252 243 14 0 chr13 112898613 112898683 -7385629 + L1MB3 LINE L1 6094 6164 -7 6 1446 733 284 90 0 chr13 112898865 112899066 -7385246 - ID_B1 SINE B4 -3 221 3 6 1446 183 42 0 0 chr13 112899082 112899106 -7385206 + (CA)n Simple_repeat Simple_repeat 2 25 0 6 1446 378 355 193 9 chr13 112899296 112899617 -7384695 + MLT1J2 LTR MaLR 69 448 0 6 1446 218 105 26 0 chr13 112899932 112899970 -7384342 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 6 1446 572 177 138 0 chr13 112900004 112900134 -7384178 - B1_Mur4 SINE Alu 0 150 3 6 1446 182 321 94 0 chr13 112900505 112900558 -7383754 - L4 LINE RTE -703 1326 1269 6 1446 1321 0 5 53 chr13 112900744 112900933 -7383379 + (TTCCC)n Simple_repeat Simple_repeat 1 180 0 6 1446 303 282 173 15 chr13 112900959 112901092 -7383220 - HAL1-3A_ME LINE L1 -420 2438 2285 6 1446 191 128 0 49 chr13 112901092 112901133 -7383179 + C-rich Low_complexity Low_complexity 3 41 0 6 1446 393 340 96 57 chr13 112901384 112901665 -7382647 + LTR16E2 LTR ERVL 275 566 -2 6 1446 321 269 72 66 chr13 112901728 112901895 -7382417 + L2a LINE L2 3259 3426 0 6 1446 334 387 37 16 chr13 112901955 112902197 -7382115 + MIR SINE MIR 9 255 -7 7 1446 418 21 0 0 chr13 112902486 112902534 -7381778 + (TTC)n Simple_repeat Simple_repeat 3 50 0 7 1446 908 131 17 6 chr13 112902534 112902710 -7381602 + CT-rich Low_complexity Low_complexity 3 180 0 7 1446 1228 186 5 5 chr13 112902883 112903088 -7381224 + B3 SINE B2 1 205 -11 7 1446 743 236 148 18 chr13 112903138 112903367 -7380945 + B4A SINE B4 22 280 -12 7 1446 420 20 0 0 chr13 112903399 112903448 -7380864 + (CA)n Simple_repeat Simple_repeat 2 50 0 7 1446 218 167 24 0 chr13 112903487 112903529 -7380783 + B4 SINE B4 2 44 -248 7 1446 232 256 112 25 chr13 112903811 112903891 -7380421 + Kanga1 DNA Tc2 652 738 -1007 7 1446 405 0 0 0 chr13 112904476 112904521 -7379791 + (CA)n Simple_repeat Simple_repeat 2 46 0 7 1446 342 0 0 0 chr13 112904683 112904721 -7379591 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 7 1446 1498 303 120 18 chr13 112906678 112907385 -7376927 + Tigger6a DNA MER2_type 1 779 -304 7 1446 251 266 51 0 chr13 112907485 112907564 -7376748 - ID4 SINE ID 0 83 1 7 1446 262 375 117 38 chr13 112907564 112907878 -7376434 + MER74B LTR ERVL 147 485 -137 7 1446 522 379 75 46 chr13 112907976 112908283 -7376029 + Tigger6a DNA MER2_type 766 1081 -2 7 1446 267 258 10 82 chr13 112908923 112909020 -7375292 + LTR48B LTR ERV1 138 227 -417 7 1446 253 270 76 111 chr13 112911175 112911346 -7372966 - MER58A DNA MER1_type -9 215 51 7 1446 642 236 8 112 chr13 112912033 112912254 -7372058 - MTD LTR MaLR -8 411 193 7 1446 324 48 0 0 chr13 112912262 112912304 -7372008 + (CA)n Simple_repeat Simple_repeat 2 43 0 7 1446 216 0 0 0 chr13 112912303 112912327 -7371985 + (TC)n Simple_repeat Simple_repeat 2 25 0 7 1446 365 82 0 0 chr13 112912327 112912376 -7371936 + HAL1-3A_ME LINE L1 1977 2025 -833 7 1446 1100 180 36 31 chr13 112912738 112912962 -7371350 + URR1A DNA MER1_type 2 226 0 7 1446 297 272 45 64 chr13 112914146 112914256 -7370056 + PB1D7 SINE Alu 6 113 -7 7 1446 522 192 22 81 chr13 112914987 112915123 -7369189 + RSINE1 SINE B4 3 130 -35 7 1446 270 0 0 0 chr13 112915131 112915161 -7369151 + (CTAA)n Simple_repeat Simple_repeat 3 32 0 7 1446 652 244 90 30 chr13 112915186 112915452 -7368860 + B4A SINE B4 2 283 -9 7 1446 825 330 64 35 chr13 112915494 112915871 -7368441 - MLT1C LTR MaLR -58 409 22 7 1446 241 315 48 127 chr13 112916262 112916451 -7367861 + MIR SINE MIR 68 241 -21 7 1446 282 179 0 0 chr13 112916827 112916883 -7367429 + CT-rich Low_complexity Low_complexity 1 56 0 7 1446 1223 255 62 102 chr13 112917169 112917553 -7366759 - MTEa LTR MaLR -8 371 3 7 1446 352 268 16 82 chr13 112917579 112917701 -7366611 - PB1D10 SINE Alu -3 114 1 7 1446 243 356 0 0 chr13 112918017 112918090 -7366222 - L2b LINE L2 0 3375 3303 7 1446 198 118 0 0 chr13 112918913 112918947 -7365365 + (CAACC)n Simple_repeat Simple_repeat 1 34 0 7 1446 214 225 36 48 chr13 112918983 112919067 -7365245 + (TAGA)n Simple_repeat Simple_repeat 2 84 0 7 1446 352 277 92 35 chr13 112919073 112919215 -7365097 + MLT1A LTR MaLR 13 162 -212 7 1446 369 149 0 0 chr13 112919249 112919316 -7364996 + (GGGA)n Simple_repeat Simple_repeat 3 69 0 7 1446 989 316 54 29 chr13 112919641 112920087 -7364225 + MLT1A-int LTR MaLR 937 1735 0 7 1446 587 312 75 38 chr13 112920112 112920238 -7364074 + MLT1A LTR MaLR 48 174 -200 7 1446 789 107 0 0 chr13 112920238 112920378 -7363934 + (TC)n Simple_repeat Simple_repeat 1 140 0 7 1446 587 312 84 40 chr13 112920378 112920526 -7363786 + MLT1A LTR MaLR 164 326 -39 7 1446 732 243 60 22 chr13 112920595 112920780 -7363532 + RMER30 DNA MER1_type 8 199 -3 7 1446 255 379 19 0 chr13 112921968 112922071 -7362241 - B4 SINE B4 -164 128 24 7 1446 373 290 97 40 chr13 112922125 112922301 -7362011 - ID_B1 SINE B4 -17 207 22 7 1446 229 326 92 0 chr13 112922936 112923034 -7361278 - L2a LINE L2 -9 3417 3311 7 1446 230 252 34 0 chr13 112923360 112923435 -7360877 + ID4_ SINE ID 5 82 -1 7 1446 229 346 84 0 chr13 112923448 112923555 -7360757 - MLT1A1 LTR MaLR -25 383 268 7 1446 222 305 0 0 chr13 112923606 112923665 -7360647 + GA-rich Low_complexity Low_complexity 2 60 0 7 1446 992 117 4 8 chr13 112923667 112923900 -7360412 + (TAGA)n Simple_repeat Simple_repeat 1 232 0 7 1446 319 190 93 58 chr13 112924090 112924228 -7360084 + MIRc SINE MIR 125 262 0 7 1446 1099 66 0 0 chr13 112924683 112924819 -7359493 + B1_Mus1 SINE Alu 3 138 -10 7 1446 1367 95 5 5 chr13 112925425 112925615 -7358697 + B2_Mm2 SINE B2 1 190 -5 7 1446 374 319 46 5 chr13 112925685 112925880 -7358432 - L1MEd LINE L1 -1002 5144 4942 7 1446 425 319 67 90 chr13 112926145 112926386 -7357926 - L1MEd LINE L1 -5563 573 312 7 1446 2978 33 0 0 chr13 112926386 112926718 -7357594 + IAPEY3_LTR LTR ERVK 1 332 0 7 1446 425 319 67 90 chr13 112926718 112927000 -7357312 - L1MEd LINE L1 -5825 311 63 7 1446 1843 148 157 3 chr13 112927045 112927363 -7356949 - ORR1B2 LTR MaLR 0 367 1 7 1446 1077 60 0 7 chr13 112927791 112927926 -7356386 + B1_Mm SINE Alu 2 135 -12 7 1446 200 34 0 33 chr13 112927927 112927957 -7356355 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1446 191 129 86 0 chr13 112928007 112928077 -7356235 + T-rich Low_complexity Low_complexity 2 77 0 7 1446 621 50 394 0 chr13 112930403 112930502 -7353810 + B1_Mus1 SINE Alu 1 138 -10 7 1446 564 15 0 0 chr13 112930502 112930567 -7353745 + (GA)n Simple_repeat Simple_repeat 2 66 0 7 1446 225 0 0 0 chr13 112930947 112930972 -7353340 + (T)n Simple_repeat Simple_repeat 1 25 0 7 1446 182 167 59 59 chr13 112931793 112931844 -7352468 + L3 LINE CR1 2261 2311 -2178 7 1446 308 259 118 7 chr13 112932110 112932254 -7352058 - RMER10A LTR ERVL -25 417 258 7 1446 330 295 37 75 chr13 112932286 112932447 -7351865 + HAL1-3A_ME LINE L1 2285 2439 -419 7 1446 969 42 0 0 chr13 112932797 112932916 -7351396 + B1_Mus1 SINE Alu 30 148 0 7 1446 31 26 0 0 chr13 112934278 112934316 -7349996 + AT_rich Low_complexity Low_complexity 1 38 0 7 1446 248 264 65 54 chr13 112935834 112935926 -7348386 + RMER10A LTR ERVL 18 110 -332 7 1446 286 225 56 122 chr13 112936078 112936366 -7347946 + RMER17A2 LTR ERVK 222 490 -416 7 1446 442 308 105 0 chr13 112936689 112936822 -7347490 + B1F SINE Alu 3 149 0 7 1446 187 296 149 40 chr13 112937602 112937750 -7346562 - MIR3 SINE MIR 0 208 45 7 1446 2360 69 76 0 chr13 112938291 112938595 -7345717 + ORR1A2 LTR MaLR 1 327 0 7 1446 981 207 135 28 chr13 112938730 112939067 -7345245 + RLTR20C LTR ERVK 1 490 -88 7 1446 798 118 0 0 chr13 112939067 112939219 -7345093 + (TG)n Simple_repeat Simple_repeat 2 153 0 7 1446 563 254 67 27 chr13 112939219 112939310 -7345002 + RLTR20C LTR ERVK 491 577 -1 7 1446 219 229 0 0 chr13 112940114 112940175 -7344137 + (CA)n Simple_repeat Simple_repeat 1 61 0 7 1446 25 31 0 0 chr13 112940175 112940207 -7344105 + AT_rich Low_complexity Low_complexity 1 32 0 7 1446 265 246 30 15 chr13 112941732 112941798 -7342514 - MADE2 DNA Mariner 0 80 14 7 1446 446 161 0 35 chr13 112941946 112942062 -7342250 + (TA)n Simple_repeat Simple_repeat 1 112 0 7 1446 288 338 82 13 chr13 112942104 112942263 -7342049 - LTR16C LTR ERVL -2 487 318 7 1446 442 292 53 0 chr13 112942309 112942422 -7341890 - ID_B1 SINE B4 -105 119 1 7 1446 278 87 0 21 chr13 112942428 112942439 -7341873 + (TTTTG)n Simple_repeat Simple_repeat 2 12 0 7 1446 1987 152 41 23 chr13 112942439 112942830 -7341482 - RMER10B LTR ERVL 0 398 1 7 1446 278 87 0 21 chr13 112942830 112942865 -7341447 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 7 1446 271 263 90 26 chr13 112944579 112944657 -7339655 + B1F1 SINE Alu 8 90 -59 7 1446 333 47 0 0 chr13 112944666 112944709 -7339603 + (GA)n Simple_repeat Simple_repeat 2 44 0 7 1446 286 227 40 48 chr13 112944804 112944929 -7339383 - Lx9 LINE L1 -15 7629 7506 7 1446 399 157 0 0 chr13 112945223 112945293 -7339019 + (ATG)n Simple_repeat Simple_repeat 2 71 0 7 1446 306 269 25 25 chr13 112945759 112945881 -7338431 - LTR37B LTR ERV1 -4 464 343 7 1446 342 107 0 0 chr13 112945895 112945951 -7338361 + (CA)n Simple_repeat Simple_repeat 1 56 0 7 1446 189 0 0 0 chr13 112945951 112945971 -7338341 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 7 1446 1206 61 0 0 chr13 112946110 112946257 -7338055 - B1_Mus2 SINE Alu 0 147 1 7 1446 243 204 0 0 chr13 112946432 112946486 -7337826 + CT-rich Low_complexity Low_complexity 2 55 0 7 1446 1184 62 0 0 chr13 112946514 112946660 -7337652 - B1_Mus2 SINE Alu 0 147 2 7 1446 384 290 46 9 chr13 112946667 112946775 -7337537 - PB1D7 SINE Alu -8 112 1 7 1446 218 128 0 60 chr13 112946790 112946840 -7337472 + T-rich Low_complexity Low_complexity 4 50 0 7 1446 631 244 6 56 chr13 112947498 112947676 -7336636 - B4 SINE B4 0 292 124 7 1446 468 35 0 0 chr13 112947689 112947747 -7336565 + (TC)n Simple_repeat Simple_repeat 1 58 0 7 1446 327 310 20 14 chr13 112947822 112947969 -7336343 - B1F SINE Alu -1 148 1 7 1446 219 208 0 20 chr13 112948609 112948658 -7335654 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 7 1446 24 0 0 0 chr13 112948696 112948720 -7335592 + AT_rich Low_complexity Low_complexity 1 24 0 7 1446 946 183 193 6 chr13 112948720 112948901 -7335411 - B3 SINE B2 0 216 2 7 1446 223 235 44 0 chr13 112949478 112949546 -7334766 + (TATG)n Simple_repeat Simple_repeat 1 71 0 7 1446 411 56 0 0 chr13 112949625 112949679 -7334633 + (TC)n Simple_repeat Simple_repeat 2 55 0 7 1446 200 94 31 0 chr13 112949763 112949795 -7334517 + (TGG)n Simple_repeat Simple_repeat 2 34 0 7 1446 465 90 0 0 chr13 112950887 112950954 -7333358 + (TG)n Simple_repeat Simple_repeat 1 67 0 7 1446 277 331 46 8 chr13 112950971 112951102 -7333210 - MIRb SINE MIR -27 241 106 7 1446 279 324 77 71 chr13 112951343 112951735 -7332577 - L1ME3A LINE L1 -219 5954 5561 8 1446 318 313 0 0 chr13 112955008 112955139 -7329173 + (CAGAGA)n Simple_repeat Simple_repeat 1 131 0 8 1446 369 0 0 0 chr13 112957329 112957370 -7326942 + (TC)n Simple_repeat Simple_repeat 1 41 0 8 1446 372 338 28 64 chr13 112957370 112957588 -7326724 - B4 SINE B4 -82 210 1 8 1446 234 91 0 0 chr13 112957601 112957634 -7326678 + (CAT)n Simple_repeat Simple_repeat 3 35 0 8 1446 210 296 0 18 chr13 112958225 112958280 -7326032 - ID4_ SINE ID -10 73 20 8 1446 271 366 52 7 chr13 112958285 112958420 -7325892 - B1F2 SINE Alu -8 141 1 8 1446 874 270 35 32 chr13 112959579 112959893 -7324419 + Lx7 LINE L1 5313 5627 -673 8 1446 975 224 148 35 chr13 112959893 112960227 -7324085 - ORR1D1 LTR MaLR 0 370 3 8 1446 436 244 9 21 chr13 112960291 112960425 -7323887 + Lx7 LINE L1 5708 5865 -435 8 1446 1649 53 5 0 chr13 112960425 112960632 -7323680 - L1_Mus2 LINE L1 0 6566 6359 8 1446 413 267 20 125 chr13 112960632 112960752 -7323560 + Lx7 LINE L1 5830 5939 -1534 8 1446 261 139 0 0 chr13 112960757 112960800 -7323512 + (TG)n Simple_repeat Simple_repeat 1 43 0 8 1446 1431 49 0 0 chr13 112960860 112961167 -7323145 + (TG)n Simple_repeat Simple_repeat 1 307 0 8 1446 226 307 53 0 chr13 112961410 112961485 -7322827 + MLT1A0 LTR MaLR 2 80 -285 8 1446 24 32 0 0 chr13 112961546 112961577 -7322735 + AT_rich Low_complexity Low_complexity 1 31 0 8 1446 561 326 56 0 chr13 112961642 112961875 -7322437 + MLT1A0 LTR MaLR 117 362 -3 8 1446 513 356 49 25 chr13 112964629 112964914 -7319398 + B4A SINE B4 1 292 0 8 1446 3571 213 150 28 chr13 112965272 112966121 -7318191 + RMER1B Other Other 2 917 -149 8 1446 234 62 0 0 chr13 112966121 112966153 -7318159 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 8 1446 3571 213 150 28 chr13 112966153 112966248 -7318064 + RMER1B Other Other 918 1061 -5 8 1446 1883 161 97 28 chr13 112966312 112966703 -7317609 - RLTR18 LTR ERVK -10 606 189 8 1446 895 230 35 5 chr13 112966703 112966904 -7317408 + B3 SINE B2 1 207 -9 8 1446 536 271 124 20 chr13 112966927 112967176 -7317136 - L1MC1 LINE L1 -127 6206 5932 8 1446 510 235 50 16 chr13 112967296 112967417 -7316895 + B1F SINE Alu 18 142 -7 8 1446 737 251 78 128 chr13 112967741 112968116 -7316196 - MTD LTR MaLR -15 404 43 8 1446 468 0 0 0 chr13 112968116 112968168 -7316144 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 1446 488 242 107 47 chr13 112968168 112968203 -7316109 - MTD LTR MaLR -337 42 10 8 1446 6894 72 24 6 chr13 112968240 112969944 -7314368 + L1VL2 LINE L1 89 1826 -1789 8 1446 607 300 100 51 chr13 112970568 112970670 -7313642 + L1MB2 LINE L1 4686 4808 -1338 8 1446 366 61 0 0 chr13 112970670 112970719 -7313593 + (ACTAG)n Simple_repeat Simple_repeat 5 53 0 8 1446 607 300 100 51 chr13 112970719 112971245 -7313067 + L1MB2 LINE L1 4809 5344 -802 8 1446 835 242 23 28 chr13 112971698 112971915 -7312397 + B3 SINE B2 1 216 0 8 1446 21 36 0 0 chr13 112971921 112971949 -7312363 + AT_rich Low_complexity Low_complexity 1 28 0 8 1446 229 287 21 21 chr13 112971952 112972048 -7312264 + L1MB2 LINE L1 5787 5882 -289 8 1446 219 36 0 0 chr13 112972048 112972076 -7312236 + (CA)n Simple_repeat Simple_repeat 1 28 0 8 1446 345 313 54 18 chr13 112972078 112972299 -7312013 + L1MB2 LINE L1 5914 6142 -29 8 1446 863 274 29 45 chr13 112972543 112972856 -7311456 + ORR1D2 LTR MaLR 1 308 -62 8 1446 588 261 51 6 chr13 112972855 112973032 -7311280 + ORR1E LTR MaLR 11 195 -164 8 1446 426 235 20 39 chr13 112973397 112973499 -7310813 - PB1D10 SINE Alu -17 100 1 8 1446 236 278 50 34 chr13 112975050 112975169 -7309143 - L2a LINE L2 -62 3364 3244 8 1446 272 338 40 66 chr13 112975180 112975332 -7308980 - L2a LINE L2 -250 3176 3029 8 1446 191 98 73 0 chr13 112975571 112975612 -7308700 + G-rich Low_complexity Low_complexity 4 47 0 8 1446 226 328 84 23 chr13 112975785 112975916 -7308396 - MER5B DNA MER1_type -16 162 24 8 1446 2412 144 29 24 chr13 112976743 112977162 -7307150 - MTC LTR MaLR 0 421 1 8 1446 21 0 0 0 chr13 112978114 112978135 -7306177 + GC_rich Low_complexity Low_complexity 1 21 0 8 1446 182 118 29 0 chr13 112980657 112980691 -7303621 + (TC)n Simple_repeat Simple_repeat 2 36 0 8 1446 1438 67 19 9 chr13 112980695 112980906 -7303406 - L1_Mus3 LINE L1 -6 6632 6420 8 1446 203 0 37 0 chr13 112981946 112981973 -7302339 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 8 1446 555 16 0 0 chr13 112983950 112984014 -7300298 + (TC)n Simple_repeat Simple_repeat 1 64 0 8 1447 357 24 0 0 chr13 112984214 112984256 -7300056 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1447 263 270 141 94 chr13 112985040 112985359 -7298953 + MLT1B LTR MaLR 3 336 -54 8 1447 2282 177 102 10 chr13 112985620 112986100 -7298212 - RLTR28 LTR ERVL 0 524 1 8 1447 22 0 0 0 chr13 112986335 112986357 -7297955 + AT_rich Low_complexity Low_complexity 1 22 0 8 1447 321 343 8 0 chr13 112986469 112986603 -7297709 + MIR SINE MIR 111 245 -17 8 1447 200 294 0 56 chr13 112986694 112986766 -7297546 - MIRb SINE MIR -163 105 38 8 1447 232 339 68 75 chr13 112987881 112988146 -7296166 - MER102b DNA MER1_type -77 264 2 8 1447 243 297 0 0 chr13 112988180 112988244 -7296068 + MLT1J1 LTR MaLR 31 94 -350 8 1447 999 283 76 36 chr13 112989310 112989510 -7294802 - MTE2b LTR MaLR -4 375 155 8 1447 1394 241 62 14 chr13 112989510 112989863 -7294449 + ORR1D2 LTR MaLR 1 370 0 8 1447 999 283 76 36 chr13 112989863 112990018 -7294294 - MTE2b LTR MaLR -225 154 7 8 1447 261 0 0 0 chr13 112991579 112991608 -7292704 + (CA)n Simple_repeat Simple_repeat 2 30 0 8 1447 228 320 70 30 chr13 112992440 112992540 -7291772 + B4 SINE B4 74 177 -115 8 1447 416 224 0 0 chr13 112992466 112992551 -7291761 + PB1D10 SINE Alu 12 96 -21 8 1447 314 227 124 0 chr13 112994130 112994227 -7290085 - L1ME1 LINE L1 -196 5983 5875 8 1447 259 320 6 138 chr13 112994320 112994501 -7289811 + RSINE1 SINE B4 7 163 -2 8 1447 315 0 0 0 chr13 112995063 112995098 -7289214 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 8 1447 188 255 0 0 chr13 112996396 112996443 -7287869 + MER5B DNA MER1_type 8 54 -124 8 1447 563 259 70 78 chr13 112996639 112996882 -7287430 + MER2 DNA MER2_type 21 261 -84 8 1447 971 263 68 31 chr13 112996882 112997176 -7287136 + ORR1D2 LTR MaLR 8 312 -58 8 1447 254 167 17 0 chr13 112997225 112997285 -7287027 + (CATATA)n Simple_repeat Simple_repeat 3 63 0 8 1447 349 208 26 0 chr13 112998048 112998125 -7286187 + LFSINE_Vert SINE SINE 149 227 -232 8 1447 409 203 203 0 chr13 112998585 112998708 -7285604 + B1_Mur2 SINE Alu 2 149 0 8 1447 846 119 0 0 chr13 112998723 112998857 -7285455 + (GA)n Simple_repeat Simple_repeat 1 134 0 8 1447 242 280 64 11 chr13 112998938 112999032 -7285280 - MIRc SINE MIR -68 200 102 8 1447 231 250 13 40 chr13 112999137 112999212 -7285100 - MLT1C LTR MaLR 0 467 395 8 1447 180 77 0 0 chr13 112999213 112999239 -7285073 + (TGG)n Simple_repeat Simple_repeat 2 27 0 8 1447 700 105 18 0 chr13 112999252 112999366 -7284946 + B1_Mur3 SINE Alu 11 126 -23 8 1447 497 129 0 11 chr13 112999367 112999461 -7284851 + (GA)n Simple_repeat Simple_repeat 2 94 0 8 1447 228 277 0 0 chr13 112999924 112999971 -7284341 + MIR SINE MIR 6 52 -210 8 1447 232 232 200 13 chr13 113000013 113000121 -7284191 + MIRc SINE MIR 95 217 -51 1 1447 1702 228 48 18 chr13 113000175 113000568 -7283744 - MTD LTR MaLR -14 405 1 2 1447 743 178 0 58 chr13 113000798 113000935 -7283377 + RSINE1 SINE B4 3 131 -34 3 1447 504 0 0 0 chr13 113000936 113000992 -7283320 + (TC)n Simple_repeat Simple_repeat 1 56 0 4 1447 348 83 0 0 chr13 113000992 113001039 -7283273 + (CA)n Simple_repeat Simple_repeat 1 48 0 5 1447 260 188 16 0 chr13 113001743 113001807 -7282505 + (CA)n Simple_repeat Simple_repeat 1 65 0 6 1447 202 73 122 0 chr13 113001812 113001853 -7282459 + (CTAA)n Simple_repeat Simple_repeat 2 47 0 7 1447 410 228 79 0 chr13 113001876 113001977 -7282335 + PB1D10 SINE Alu 1 109 -8 8 1447 234 0 0 0 chr13 113003664 113003690 -7280622 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 9 1447 263 242 0 161 chr13 113005473 113005591 -7278721 + MT2B LTR ERVL 153 251 -350 1 1447 482 198 20 20 chr13 113005500 113005598 -7278714 + PB1D9 SINE Alu 10 107 -13 1 1447 682 83 27 9 chr13 113005897 113006007 -7278305 + (GGGAA)n Simple_repeat Simple_repeat 4 115 0 1 1447 759 296 35 30 chr13 113006040 113006242 -7278070 + MTE2b LTR MaLR 4 206 -173 1 1447 483 280 28 108 chr13 113006210 113006274 -7278038 - RLTR20D LTR ERVK -30 538 471 1 1447 510 114 0 0 chr13 113006274 113006353 -7277959 + (CA)n Simple_repeat Simple_repeat 1 79 0 1 1447 509 264 43 87 chr13 113006353 113006569 -7277743 - RLTR20D LTR ERVK -98 470 51 1 1447 735 280 15 30 chr13 113006571 113006770 -7277542 + MTE2b LTR MaLR 182 377 -2 1 1447 552 226 61 51 chr13 113006930 113007126 -7277186 + B3A SINE B2 1 198 0 1 1447 183 80 0 0 chr13 113007412 113007437 -7276875 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1 1447 282 373 63 32 chr13 113007843 113008001 -7276311 + LTR82B Low_complexity ERVL 34 196 -634 1 1447 430 231 0 0 chr13 113008054 113008132 -7276180 - B3 SINE B2 -133 83 6 1 1447 325 322 52 9 chr13 113008145 113008261 -7276051 + LTR82B Low_complexity ERVL 248 368 -462 2 1447 1143 198 191 28 chr13 113008533 113008851 -7275461 - MTEb LTR MaLR -7 372 3 2 1447 306 0 0 0 chr13 113009949 113009983 -7274329 + (TG)n Simple_repeat Simple_repeat 1 34 0 2 1447 414 0 0 0 chr13 113009983 113010028 -7274284 + (GA)n Simple_repeat Simple_repeat 1 46 0 2 1447 787 292 71 0 chr13 113010157 113010369 -7273943 + B4A SINE B4 66 292 0 2 1447 226 273 51 25 chr13 113011352 113011431 -7272881 + MER20B DNA MER1_type 64 144 -639 2 1447 934 314 30 63 chr13 113012010 113012090 -7272222 + ORR1E LTR MaLR 3 79 -280 2 1447 1101 190 18 22 chr13 113012090 113012316 -7271996 + URR1B DNA MER1_type 1 225 0 2 1447 934 314 30 63 chr13 113012316 113012602 -7271710 + ORR1E LTR MaLR 80 357 -2 2 1447 678 72 0 0 chr13 113014209 113014306 -7270006 + (TC)n Simple_repeat Simple_repeat 2 98 0 2 1447 1332 198 93 32 chr13 113014314 113014659 -7269653 - ORR1D2 LTR MaLR 0 370 5 2 1447 1622 40 0 0 chr13 113014787 113014985 -7269327 + RLTR10 LTR ERVK 1 198 -192 3 1447 3949 41 32 2 chr13 113015044 113015929 -7268383 + RLTR10-int LTR ERVK 11 998 -989 3 1447 336 256 62 39 chr13 113015993 113016123 -7268189 + RLTR10-int LTR ERVK 1462 1594 -5987 3 1447 8884 19 7 0 chr13 113016205 113017193 -7267119 + RLTR10-int LTR ERVK 990 1984 -3 3 1447 2925 31 2 156 chr13 113017195 113017656 -7266656 + RLTR10 LTR ERVK 1 390 0 3 1447 473 0 18 0 chr13 113017961 113018018 -7266294 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 1447 450 0 0 0 chr13 113018880 113018930 -7265382 + (TC)n Simple_repeat Simple_repeat 2 51 0 3 1447 369 0 0 0 chr13 113018930 113018970 -7265342 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1447 198 0 0 0 chr13 113018999 113019021 -7265291 + (CA)n Simple_repeat Simple_repeat 2 23 0 3 1447 905 262 64 8 chr13 113019021 113019271 -7265041 - B4A SINE B4 -24 268 5 3 1447 1388 262 72 41 chr13 113020429 113020915 -7263397 + MER77 LTR ERVL 10 510 -97 3 1447 548 277 171 34 chr13 113020943 113020998 -7263314 - B4A SINE B4 -19 273 219 3 1447 453 19 0 0 chr13 113020998 113021052 -7263260 + (TTTTG)n Simple_repeat Simple_repeat 2 55 0 3 1447 548 277 171 34 chr13 113021052 113021235 -7263077 - B4A SINE B4 -74 218 3 3 1447 363 23 0 0 chr13 113021819 113021863 -7262449 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1447 261 247 191 53 chr13 113021864 113021958 -7262354 + MER58B DNA MER1_type 226 332 -9 4 1447 962 302 42 50 chr13 113022097 113022456 -7261856 + MLT1B LTR MaLR 19 374 -16 4 1447 562 335 82 6 chr13 113022694 113022877 -7261435 + B4 SINE B4 18 214 -78 4 1447 1686 218 139 20 chr13 113022882 113022955 -7261357 - Lx2B LINE L1 -1 6999 6922 4 1447 180 0 0 0 chr13 113022955 113022975 -7261337 + (CA)n Simple_repeat Simple_repeat 1 20 0 4 1447 6447 94 27 17 chr13 113022982 113023930 -7260382 - RMER17B LTR ERVK 0 958 1 4 1447 1686 218 139 20 chr13 113023930 113024344 -7259968 - Lx2B LINE L1 -84 6916 6445 4 1447 459 0 0 0 chr13 113024444 113024495 -7259817 + (CA)n Simple_repeat Simple_repeat 1 51 0 4 1447 348 301 40 34 chr13 113025207 113025355 -7258957 - MER5A1 DNA MER1_type -17 149 1 4 1447 764 212 45 60 chr13 113025602 113025803 -7258509 + B3A SINE B2 1 198 0 4 1447 313 329 45 51 chr13 113025907 113026064 -7258248 - MLT1L LTR MaLR -348 262 107 5 1447 210 320 156 26 chr13 113026431 113026585 -7257727 - MIRb SINE MIR -82 186 13 5 1447 582 208 61 72 chr13 113026778 113026959 -7257353 + B3A SINE B2 4 182 -16 5 1447 296 282 0 0 chr13 113027834 113027905 -7256407 - MIRc SINE MIR -124 144 74 5 1447 512 248 26 9 chr13 113028982 113029096 -7255216 + PB1D10 SINE Alu 1 116 -1 5 1447 313 358 130 12 chr13 113030491 113030822 -7253490 + L1MC5 LINE L1 7449 7818 -143 5 1447 477 90 0 0 chr13 113031156 113031223 -7253089 + (TA)n Simple_repeat Simple_repeat 2 68 0 5 1447 297 0 0 0 chr13 113032565 113032598 -7251714 + (CTTG)n Simple_repeat Simple_repeat 1 33 0 5 1447 927 133 23 0 chr13 113032598 113032771 -7251541 + CT-rich Low_complexity Low_complexity 1 177 0 5 1447 545 42 14 0 chr13 113032771 113032843 -7251469 + (TC)n Simple_repeat Simple_repeat 1 73 0 5 1447 362 330 32 49 chr13 113033077 113033262 -7251050 + MER53 DNA hAT 11 192 -1 6 1447 1336 153 9 22 chr13 113033743 113033970 -7250342 + URR1B DNA MER1_type 2 225 0 6 1447 387 291 86 64 chr13 113034226 113034413 -7249899 + LTR82B Low_complexity ERVL 58 248 -582 6 1447 212 0 0 35 chr13 113034680 113034709 -7249603 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 6 1447 1062 82 0 0 chr13 113034709 113034843 -7249469 - B1_Mus2 SINE Alu -13 134 1 6 1447 227 237 136 97 chr13 113034858 113034961 -7249351 - PB1D10 SINE Alu -1 119 13 6 1447 190 267 171 38 chr13 113036186 113036291 -7248021 + MIR3 SINE MIR 49 167 -41 6 1447 183 333 0 0 chr13 113036385 113036439 -7247873 - MIRm SINE MIR -145 131 78 6 1447 1222 195 141 80 chr13 113036476 113036838 -7247474 + ORR1B1 LTR MaLR 1 384 0 6 1447 263 296 24 12 chr13 113037707 113037789 -7246523 - ID4 SINE ID 0 83 1 6 1447 5065 182 56 10 chr13 113037857 113038937 -7245375 + ORR1B1-int LTR MaLR 358 1509 0 6 1447 2449 158 18 3 chr13 113038937 113039325 -7244987 + ORR1B1 LTR MaLR 1 394 0 6 1447 1465 192 93 15 chr13 113039378 113039721 -7244591 - ORR1D2 LTR MaLR 0 370 1 7 1447 1173 194 0 0 chr13 113040313 113040504 -7243808 + B3 SINE B2 1 191 -25 7 1447 546 16 0 0 chr13 113040509 113040572 -7243740 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 7 1447 211 350 95 48 chr13 113040572 113040698 -7243614 - L2b LINE L2 -20 3355 3224 7 1447 281 235 205 25 chr13 113040731 113040853 -7243459 + MER82 DNA MER2_type 47 190 -463 7 1447 223 311 83 19 chr13 113041364 113041472 -7242840 + MIRb SINE MIR 96 210 -58 7 1447 543 347 77 58 chr13 113044291 113044707 -7239605 + LTR16A1 LTR ERVL 33 456 0 7 1447 786 278 41 0 chr13 113044862 113045056 -7239256 - ID_B1 SINE B4 -19 205 4 7 1447 183 162 0 0 chr13 113045203 113045240 -7239072 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1447 691 281 118 0 chr13 113045258 113045496 -7238816 - MLT2C1 LTR ERVL -128 269 4 7 1447 275 291 69 76 chr13 113045561 113045706 -7238606 + L2a LINE L2 3283 3426 0 8 1447 1236 96 0 0 chr13 113045723 113045900 -7238412 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 8 1447 440 208 112 20 chr13 113046168 113046266 -7238046 - B4 SINE B4 -78 214 108 8 1447 207 0 0 0 chr13 113046633 113046656 -7237656 + (CAA)n Simple_repeat Simple_repeat 2 24 0 8 1447 195 42 0 0 chr13 113046665 113046689 -7237623 + (CAAA)n Simple_repeat Simple_repeat 4 27 0 8 1447 655 232 55 88 chr13 113046692 113046847 -7237465 + L1MA4 LINE L1 5213 5363 -928 8 1447 1147 76 7 0 chr13 113046847 113046991 -7237321 + B1_Mus2 SINE Alu 2 146 -1 8 1447 655 258 60 98 chr13 113046991 113047496 -7236816 + L1MA4 LINE L1 5352 5911 -389 8 1447 255 152 0 0 chr13 113047574 113047620 -7236692 + (CAG)n Simple_repeat Simple_repeat 3 48 0 8 1447 728 202 0 0 chr13 113047854 113047983 -7236329 + B1_Mus2 SINE Alu 1 129 -18 8 1447 746 117 8 0 chr13 113048358 113048478 -7235834 + (CA)n Simple_repeat Simple_repeat 1 121 0 8 1447 289 275 42 52 chr13 113049094 113049190 -7235122 + MTEa LTR MaLR 285 379 0 9 1447 492 184 0 0 chr13 113049905 113050008 -7234304 + (TTG)n Simple_repeat Simple_repeat 3 105 0 9 1447 3417 275 50 56 chr13 113050146 113051359 -7232953 + Lx8 LINE L1 6261 7466 -7 9 1447 311 274 10 87 chr13 113052126 113052230 -7232082 + MTEa LTR MaLR 4 99 -280 9 1447 302 288 23 46 chr13 113052230 113052257 -7232055 + MLT2B3 LTR ERVL 4 131 -423 9 1447 1368 47 0 0 chr13 113053053 113053223 -7231089 + B2_Mm2 SINE B2 1 170 -25 9 1447 263 305 198 4 chr13 113053350 113053493 -7230819 - MIR SINE MIR -21 247 87 9 1447 325 0 129 0 chr13 113053708 113053793 -7230519 + (CCTG)n Simple_repeat Simple_repeat 4 99 0 9 1447 264 290 0 28 chr13 113054260 113054331 -7229981 - ID4_ SINE ID -14 69 1 9 1447 1037 123 0 0 chr13 113054443 113054589 -7229723 - B1_Mus1 SINE Alu 0 148 3 9 1447 776 162 55 30 chr13 113054830 113054995 -7229317 - RMER1A Other Other -1 1029 861 1 1447 797 98 73 36 chr13 113055451 113055588 -7228724 + B1_Mur4 SINE Alu 9 150 0 1 1447 270 408 0 0 chr13 113055690 113055793 -7228519 - MIRb SINE MIR -46 222 120 1 1447 495 0 0 0 chr13 113056265 113056320 -7227992 + (TG)n Simple_repeat Simple_repeat 1 55 0 1 1447 363 121 0 0 chr13 113056577 113056635 -7227677 + (TC)n Simple_repeat Simple_repeat 1 58 0 1 1447 613 123 9 28 chr13 113056737 113056846 -7227466 - B1_Mus2 SINE Alu -1 146 40 1 1447 213 151 0 0 chr13 113056854 113056907 -7227405 + C-rich Low_complexity Low_complexity 13 65 0 1 1447 438 261 36 22 chr13 113057689 113057826 -7226486 + MTEb LTR MaLR 241 379 0 1 1447 4401 125 76 25 chr13 113059124 113059938 -7224374 - RLTR13D6 LTR ERVK -46 856 1 1 1447 264 303 170 18 chr13 113060017 113060178 -7224134 + LTR16D2 LTR ERVL 188 465 -210 1 1447 749 257 107 64 chr13 113060212 113060540 -7223772 + ORR1E LTR MaLR 18 359 0 1 1447 1167 202 9 9 chr13 113061466 113061691 -7222621 - URR1B DNA MER1_type 0 225 1 1 1447 680 149 325 30 chr13 113063068 113063234 -7221078 + B3 SINE B2 2 216 0 1 1447 294 316 0 0 chr13 113063555 113063631 -7220681 + LTR41B LTR ERVL 450 525 -233 1 1447 282 109 18 18 chr13 113064483 113064539 -7219773 + MTC LTR MaLR 207 262 -159 1 1447 1975 134 104 16 chr13 113064941 113065327 -7218985 + MTC LTR MaLR 2 421 0 1 1447 324 0 0 0 chr13 113065605 113065641 -7218671 + (T)n Simple_repeat Simple_repeat 1 36 0 1 1447 294 253 31 112 chr13 113067096 113067194 -7217118 + B1F2 SINE Alu 5 94 -55 1 1447 234 0 0 0 chr13 113067558 113067584 -7216728 + (TA)n Simple_repeat Simple_repeat 1 26 0 1 1447 243 291 99 81 chr13 113068123 113068396 -7215916 - RMER10A LTR ERVL -147 295 18 1 1447 234 211 88 0 chr13 113068997 113069054 -7215258 - MT2A LTR ERVL 0 601 540 1 1447 1572 147 33 36 chr13 113069051 113069354 -7214958 - ORR1A4 LTR MaLR -27 302 1 1 1447 1081 192 70 109 chr13 113069403 113069848 -7214464 - MT2A LTR ERVL -52 549 5 1 1447 890 133 28 0 chr13 113070035 113070178 -7214134 - B1_Mus2 SINE Alu 0 147 1 1 1447 242 307 78 8 chr13 113070354 113070482 -7213830 - ORR1E LTR MaLR -222 137 1 1 1447 235 167 93 40 chr13 113070640 113070715 -7213597 + MER5A1 DNA MER1_type 88 166 0 1 1447 235 87 21 42 chr13 113071053 113071101 -7213211 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1 1447 3866 25 5 0 chr13 113071893 113072327 -7211985 + RLTR10C LTR ERVK 1 436 0 1 1447 189 0 0 0 chr13 113072435 113072456 -7211856 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 1 1447 27 0 0 0 chr13 113072531 113072558 -7211754 + AT_rich Low_complexity Low_complexity 1 27 0 1 1447 23 0 0 0 chr13 113072654 113072677 -7211635 + AT_rich Low_complexity Low_complexity 1 23 0 1 1447 3162 75 2 0 chr13 113073472 113073871 -7210441 + MTB LTR MaLR 1 400 0 1 1447 503 257 29 0 chr13 113074030 113074135 -7210177 - ID_B1 SINE B4 -7 217 110 1 1447 270 218 100 84 chr13 113074325 113074515 -7209797 + Charlie10 DNA MER1_type 271 463 -2359 1 1447 242 272 96 54 chr13 113074515 113074682 -7209630 - L1ME1 LINE L1 -10 6169 5996 1 1447 234 0 0 0 chr13 113074709 113074735 -7209577 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1 1447 2563 201 29 103 chr13 113074772 113075432 -7208880 + RMER19C LTR ERVK 1 611 0 1 1447 241 242 16 0 chr13 113075444 113075506 -7208806 - L1ME1 LINE L1 -265 5909 5847 1 1447 561 178 7 20 chr13 113075579 113075728 -7208584 + (TATG)n Simple_repeat Simple_repeat 4 150 0 1 1447 284 70 23 0 chr13 113075757 113075800 -7208512 + (GA)n Simple_repeat Simple_repeat 1 44 0 1 1447 331 247 23 12 chr13 113076090 113076176 -7208136 + L1ME1 LINE L1 5995 6081 -98 1 1447 489 320 22 38 chr13 113076501 113076686 -7207626 - MLT1C LTR MaLR 0 467 286 1 1447 279 237 39 13 chr13 113076829 113076906 -7207406 - MLT1C LTR MaLR -547 80 2 1 1447 203 258 30 15 chr13 113077061 113077128 -7207184 + (TG)n Simple_repeat Simple_repeat 1 68 0 1 1447 479 289 80 11 chr13 113077146 113077321 -7206991 - B4A SINE B4 -18 274 88 1 1447 338 303 88 29 chr13 113077941 113078145 -7206167 + B4A SINE B4 77 292 0 1 1447 588 14 0 0 chr13 113079254 113079323 -7204989 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 1447 257 213 21 0 chr13 113080209 113080303 -7204009 - RMER17C LTR ERVK -151 259 164 1 1447 527 74 12 0 chr13 113080718 113080799 -7203513 + (TC)n Simple_repeat Simple_repeat 2 83 0 1 1447 595 212 265 7 chr13 113081328 113081475 -7202837 + U2 snRNA snRNA 1 185 -3 1 1447 801 49 0 0 chr13 113081487 113081589 -7202723 + (GA)n Simple_repeat Simple_repeat 1 102 0 1 1447 311 333 16 24 chr13 113081764 113081887 -7202425 - RMER15 LTR ERVL -103 472 351 1 1447 278 260 103 10 chr13 113082105 113082202 -7202110 - Lx8 LINE L1 -334 7139 7034 1 1447 409 284 40 34 chr13 113083312 113083487 -7200825 - MLT1C LTR MaLR -3 464 289 1 1447 2027 77 4 11 chr13 113083669 113083944 -7200368 - L1_Mus2 LINE L1 0 6566 6294 1 1447 697 239 10 69 chr13 113084081 113084283 -7200029 + MTD LTR MaLR 3 192 -227 1 1447 811 138 8 8 chr13 113084287 113084418 -7199894 + B1_Mur4 SINE Alu 13 143 -7 1 1447 865 240 28 5 chr13 113084428 113084646 -7199666 + MTD LTR MaLR 197 419 0 1 1447 219 65 0 0 chr13 113084659 113084677 -7199635 + (TA)n Simple_repeat Simple_repeat 1 18 0 1 1447 405 0 0 0 chr13 113084677 113084722 -7199590 + (TG)n Simple_repeat Simple_repeat 2 46 0 1 1447 219 65 0 0 chr13 113084722 113084734 -7199578 + (TA)n Simple_repeat Simple_repeat 1 12 0 1 1447 312 27 0 0 chr13 113086667 113086704 -7197608 + (TG)n Simple_repeat Simple_repeat 1 37 0 1 1447 513 0 0 0 chr13 113086704 113086760 -7197552 + (GA)n Simple_repeat Simple_repeat 1 57 0 1 1447 306 337 62 23 chr13 113086822 113086998 -7197314 - B4A SINE B4 -109 183 1 1 1447 293 288 0 12 chr13 113089296 113089377 -7194935 + MIR SINE MIR 168 247 -15 1 1447 234 351 11 0 chr13 113089423 113089517 -7194795 + MIR SINE MIR 162 256 -6 1 1447 180 111 0 0 chr13 113089910 113089937 -7194375 + (TC)n Simple_repeat Simple_repeat 1 27 0 1 1447 357 102 0 0 chr13 113089940 113089999 -7194313 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1447 393 310 92 33 chr13 113090482 113090675 -7193637 + MIRb SINE MIR 21 231 -37 1 1447 25 0 0 0 chr13 113091257 113091282 -7193030 + AT_rich Low_complexity Low_complexity 1 25 0 1 1447 406 288 30 8 chr13 113091933 113092066 -7192246 + RSINE1 SINE B4 1 136 -29 1 1447 771 11 0 0 chr13 113092089 113092177 -7192135 + (TC)n Simple_repeat Simple_repeat 1 88 0 1 1447 342 0 0 0 chr13 113092177 113092214 -7192098 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1447 862 275 19 0 chr13 113092813 113093020 -7191292 - B3 SINE B2 0 216 6 1 1447 214 296 0 0 chr13 113093111 113093165 -7191147 + MER5B DNA MER1_type 77 130 -48 1 1447 198 231 19 19 chr13 113093188 113093241 -7191071 + MER5B DNA MER1_type 122 174 -4 1 1447 2057 123 216 33 chr13 113093571 113093965 -7190347 - RMER4A LTR ERVK 0 466 1 1 1447 1779 134 56 20 chr13 113093965 113094030 -7190282 - MurERV4-int LTR ERVK 0 5260 5201 1 1447 4233 52 2 4 chr13 113094030 113094552 -7189760 - L1Md_F2 LINE L1 -5 6577 6057 1 1447 1779 134 56 20 chr13 113094552 113094790 -7189522 - MurERV4-int LTR ERVK -60 5200 4946 1 1447 12721 151 41 6 chr13 113094782 113096915 -7187397 - MurERV4-int LTR ERVK -3041 2219 12 1 1447 2351 138 70 52 chr13 113096926 113097384 -7186928 - RMER4A LTR ERVK 0 466 1 1 1447 242 274 0 0 chr13 113097707 113097769 -7186543 + MTEa LTR MaLR 3 64 -315 1 1447 330 267 119 17 chr13 113098569 113098687 -7185625 + B1F SINE Alu 20 149 0 1 1447 460 275 63 2 chr13 113098701 113098827 -7185485 + B1F1 SINE Alu 6 136 -13 1 1447 345 62 0 0 chr13 113099955 113100003 -7184309 + (TTGG)n Simple_repeat Simple_repeat 2 49 0 1 1447 257 263 136 49 chr13 113100478 113100701 -7183611 - MTEa LTR MaLR -22 357 96 1 1447 6817 108 28 7 chr13 113101092 113102092 -7182220 - RLTR13D2 LTR ERVK 0 1023 3 1 1447 432 0 0 0 chr13 113102092 113102140 -7182172 + (TC)n Simple_repeat Simple_repeat 2 49 0 1 1447 315 0 0 0 chr13 113102140 113102174 -7182138 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1447 1271 296 113 56 chr13 113102891 113103376 -7180936 + L1MB3 LINE L1 4365 4864 -1276 1 1447 922 155 0 13 chr13 113103376 113103526 -7180786 + B1_Mur3 SINE Alu 1 148 -1 1 1447 2029 274 87 64 chr13 113103526 113104223 -7180089 + L1MB3 LINE L1 4865 5575 -608 1 1447 1761 219 47 12 chr13 113104223 113104626 -7179686 - MTD LTR MaLR -2 417 1 1 1447 2029 247 54 75 chr13 113104626 113105178 -7179134 + L1MB3 LINE L1 5576 6139 -44 1 1447 235 276 78 52 chr13 113105636 113105789 -7178523 - MLT1K LTR MaLR -62 533 377 1 1447 537 224 0 101 chr13 113106362 113106521 -7177791 + B1F1 SINE Alu 6 148 -1 1 1447 328 211 97 35 chr13 113106974 113107087 -7177225 - MIRb SINE MIR -114 154 35 1 1447 745 267 64 5 chr13 113108055 113108258 -7176054 + ID_B1 SINE B4 9 223 -1 1 1447 297 0 0 0 chr13 113109041 113109074 -7175238 + (TG)n Simple_repeat Simple_repeat 1 33 0 1 1447 945 308 28 8 chr13 113109075 113109330 -7174982 - B4 SINE B4 -23 269 10 1 1447 730 258 115 8 chr13 113109440 113109675 -7174637 + L1MDa LINE L1 65 324 -6309 1 1447 519 243 167 64 chr13 113109747 113109838 -7174474 + L1MDa LINE L1 3450 3532 -3005 1 1447 1225 61 0 0 chr13 113109838 113109985 -7174327 + B1_Mus2 SINE Alu 1 147 0 1 1447 519 243 167 64 chr13 113109985 113110223 -7174089 + L1MDa LINE L1 3533 3813 -2724 1 1447 297 255 39 19 chr13 113110341 113110445 -7173867 + L1MDa LINE L1 3838 3943 -2594 1 1447 327 25 0 0 chr13 113110445 113110485 -7173827 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 1 1447 1149 172 25 5 chr13 113110493 113110697 -7173615 - B3 SINE B2 -7 209 2 1 1447 320 238 170 13 chr13 113110802 113110955 -7173357 + L1MDa LINE L1 4221 4397 -2140 1 1447 246 365 9 9 chr13 113111006 113111111 -7173201 + PB1D10 SINE Alu 1 105 -12 1 1447 244 237 65 73 chr13 113111143 113111266 -7173046 + L1M3 LINE L1 4029 4150 -1990 1 1447 21 36 0 0 chr13 113111854 113111882 -7172430 + AT_rich Low_complexity Low_complexity 1 28 0 1 1447 748 188 14 48 chr13 113111891 113112036 -7172276 - B1_Mus1 SINE Alu 0 148 9 1 1447 214 242 33 0 chr13 113112068 113112159 -7172153 + GA-rich Low_complexity Low_complexity 1 94 0 1 1447 489 115 0 0 chr13 113112471 113112549 -7171763 + (T)n Simple_repeat Simple_repeat 1 78 0 1 1447 1189 81 0 0 chr13 113112549 113112697 -7171615 - B1_Mus1 SINE Alu 0 148 1 2 1447 215 182 45 0 chr13 113113552 113113596 -7170716 - B1_Mus2 SINE Alu -21 126 81 2 1447 273 378 15 86 chr13 113114450 113114647 -7169665 + MER5A DNA MER1_type 7 189 0 2 1448 441 252 78 16 chr13 113115788 113115917 -7168395 - ID_B1 SINE B4 -7 217 81 2 1448 590 191 0 8 chr13 113117088 113117215 -7167097 + GA-rich Low_complexity Low_complexity 3 128 0 2 1448 241 102 0 58 chr13 113118076 113118128 -7166184 + GA-rich Low_complexity Low_complexity 5 53 0 2 1448 394 323 123 47 chr13 113118342 113118553 -7165759 - MLT1J2 LTR MaLR -19 429 203 2 1448 1239 84 0 0 chr13 113118872 113119158 -7165154 + (TTGG)n Simple_repeat Simple_repeat 1 286 0 2 1448 590 178 106 49 chr13 113119158 113119261 -7165051 - B1_Mur4 SINE Alu 0 150 39 2 1448 270 0 0 0 chr13 113119261 113119291 -7165021 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1448 590 178 106 49 chr13 113119291 113119329 -7164983 - B1_Mur4 SINE Alu -112 38 1 2 1448 298 364 66 57 chr13 113119469 113119801 -7164511 + L4 LINE RTE 652 986 -1043 2 1448 513 0 0 0 chr13 113120043 113120100 -7164212 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1448 552 290 38 0 chr13 113120100 113120231 -7164081 - RSINE1 SINE B4 -24 141 6 2 1448 183 378 122 59 chr13 113120539 113120843 -7163469 + L4 LINE RTE 1511 1833 -196 2 1448 214 272 117 50 chr13 113120992 113121112 -7163200 + MIR3 SINE MIR 35 162 -46 2 1448 186 43 0 0 chr13 113122456 113122479 -7161833 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1448 239 109 54 18 chr13 113123198 113123254 -7161058 + (CAAA)n Simple_repeat Simple_repeat 1 58 0 2 1448 320 131 58 23 chr13 113123318 113123404 -7160908 + GA-rich Low_complexity Low_complexity 3 91 0 2 1448 234 279 227 41 chr13 113123560 113123634 -7160678 + PB1D10 SINE Alu 3 85 -32 2 1448 369 0 0 0 chr13 113123634 113123675 -7160637 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 2 1448 234 279 227 41 chr13 113123675 113123697 -7160615 + PB1D10 SINE Alu 86 117 0 2 1448 1060 138 197 0 chr13 113124078 113124266 -7160046 + URR1A DNA MER1_type 2 226 0 2 1448 874 257 40 40 chr13 113124913 113125164 -7159148 + B4A SINE B4 42 292 0 2 1448 467 236 7 0 chr13 113125164 113125304 -7159008 + (CA)n Simple_repeat Simple_repeat 1 141 0 2 1448 548 274 96 11 chr13 113125732 113125920 -7158392 - MIR SINE MIR -44 218 15 2 1448 377 216 26 178 chr13 113127774 113127926 -7156386 + MT2B LTR ERVL 134 262 -339 2 1448 690 168 82 22 chr13 113127819 113127953 -7156359 + B1_Mur2 SINE Alu 6 147 -2 2 1448 588 297 128 25 chr13 113128965 113129200 -7155112 - MER2 DNA MER2_type -81 264 6 2 1448 293 300 97 32 chr13 113129585 113129796 -7154516 - L1M5 LINE L1 -653 5791 5567 2 1448 309 320 159 44 chr13 113129901 113130153 -7154159 - L1M5 LINE L1 -791 5355 5075 2 1448 198 265 0 0 chr13 113131035 113131103 -7153209 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1448 533 293 50 7 chr13 113131107 113131248 -7153064 + B3A SINE B2 5 151 -47 2 1448 180 125 0 0 chr13 113131268 113131300 -7153012 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1448 489 299 34 34 chr13 113131625 113131833 -7152479 - Charlie4a DNA MER1_type 0 508 301 2 1448 263 304 49 37 chr13 113131835 113131917 -7152395 - ID4_ SINE ID 0 83 1 2 1448 294 305 159 19 chr13 113131929 113132036 -7152276 - B1F SINE Alu -6 143 22 2 1448 400 304 102 68 chr13 113132066 113132271 -7152041 - Charlie4a DNA MER1_type -191 317 106 2 1448 180 125 0 0 chr13 113132565 113132597 -7151715 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2 1448 645 201 43 14 chr13 113132597 113132738 -7151574 - B1_Mm SINE Alu -1 146 2 2 1448 273 146 45 0 chr13 113133064 113133153 -7151159 + T-rich Low_complexity Low_complexity 4 96 0 2 1448 740 236 187 53 chr13 113133301 113133681 -7150631 + RMER10A LTR ERVL 12 442 0 2 1448 791 141 88 7 chr13 113135056 113135192 -7149120 + B1_Mus1 SINE Alu 1 147 -1 2 1448 393 123 0 0 chr13 113135305 113135370 -7148942 + (CA)n Simple_repeat Simple_repeat 1 65 0 2 1448 189 0 0 0 chr13 113135372 113135393 -7148919 + (CCCA)n Simple_repeat Simple_repeat 2 22 0 2 1448 332 273 86 52 chr13 113135459 113135633 -7148679 + MIRb SINE MIR 37 216 -52 2 1448 433 266 115 0 chr13 113135667 113135806 -7148506 + RSINE1 SINE B4 3 157 -8 2 1448 414 0 0 0 chr13 113136065 113136111 -7148201 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1448 2268 216 80 122 chr13 113136172 113137111 -7147201 - RMER17B LTR ERVK -86 872 1 2 1448 323 372 31 0 chr13 113137633 113137762 -7146550 - MLT1J1 LTR MaLR -276 168 36 2 1448 312 27 0 0 chr13 113138395 113138432 -7145880 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 2 1448 235 287 19 65 chr13 113138672 113138780 -7145532 + L2a LINE L2 3269 3371 -55 2 1448 209 219 0 0 chr13 113139270 113139311 -7145001 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1448 352 87 0 0 chr13 113140323 113140369 -7143943 + RMER6D LTR ERVK 1 46 -674 2 1448 1338 187 65 147 chr13 113140362 113140920 -7143392 + RMER6D LTR ERVK 209 720 0 2 1448 202 333 0 0 chr13 113140978 113141035 -7143277 + MER5A DNA MER1_type 67 123 -66 2 1448 617 298 100 56 chr13 113141223 113141493 -7142819 + B4A SINE B4 2 283 -9 2 1448 638 85 11 0 chr13 113141547 113141641 -7142671 + (TC)n Simple_repeat Simple_repeat 2 96 0 2 1448 306 0 0 0 chr13 113141663 113141697 -7142615 + (CA)n Simple_repeat Simple_repeat 2 35 0 2 1448 509 247 48 68 chr13 113141763 113142015 -7142297 - L1MC LINE L1 -1772 4374 4128 2 1448 1366 242 62 33 chr13 113142346 113142714 -7141598 - MTEb LTR MaLR 0 379 1 2 1448 1782 175 39 71 chr13 113142782 113142921 -7141391 - ORR1D1 LTR MaLR 0 374 244 2 1448 249 33 0 0 chr13 113142921 113142951 -7141361 + (CAGG)n Simple_repeat Simple_repeat 4 33 0 2 1448 1782 175 39 71 chr13 113142951 113143192 -7141120 - ORR1D1 LTR MaLR -131 243 7 2 1448 333 298 24 24 chr13 113143978 113144105 -7140207 + MIR SINE MIR 57 183 -79 2 1448 215 132 26 0 chr13 113145685 113145723 -7138589 + G-rich Low_complexity Low_complexity 2 40 0 2 1448 462 18 0 0 chr13 113147029 113147084 -7137228 + (TG)n Simple_repeat Simple_repeat 2 56 0 2 1448 415 238 59 0 chr13 113147777 113147878 -7136434 + PB1D7 SINE Alu 10 116 -4 2 1448 430 312 62 0 chr13 113147892 113148036 -7136276 + RSINE1 SINE B4 4 156 -9 2 1448 1015 141 200 5 chr13 113148937 113149122 -7135190 + URR1A DNA MER1_type 6 226 0 2 1448 467 237 148 44 chr13 113148942 113149145 -7135167 - CYRA11_Mm Unknown Y-chromosome -241 376 153 2 1448 299 237 64 26 chr13 113150233 113150311 -7134001 - ID4_ SINE ID -1 82 2 2 1448 432 326 137 71 chr13 113150466 113150629 -7133683 - MamGypLTR1c LTR Gypsy -318 485 317 2 1448 294 269 13 0 chr13 113150629 113150707 -7133605 - ID4 SINE ID -1 82 4 2 1448 432 326 137 71 chr13 113150707 113150952 -7133360 - MamGypLTR1c LTR Gypsy -487 316 50 2 1448 607 209 78 21 chr13 113150962 113151104 -7133208 + B1_Mur4 SINE Alu 1 150 0 2 1448 287 238 157 30 chr13 113151443 113151577 -7132735 - L1ME1 LINE L1 -111 6068 5918 2 1448 636 252 183 55 chr13 113151882 113152319 -7131993 - L1MD3 LINE L1 -2097 5898 5406 2 1448 634 197 43 21 chr13 113152321 113152461 -7131851 - B1F1 SINE Alu 0 149 7 2 1448 420 276 46 35 chr13 113152511 113152684 -7131628 - L1MD3 LINE L1 -774 5372 5198 2 1448 397 272 9 88 chr13 113152986 113153099 -7131213 + PB1D10 SINE Alu 13 116 -1 2 1448 364 262 241 14 chr13 113153112 113153406 -7130906 + L1M5 LINE L1 5318 5678 -446 2 1448 387 0 0 0 chr13 113153880 113153923 -7130389 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1448 459 0 0 0 chr13 113153923 113153973 -7130339 + (GA)n Simple_repeat Simple_repeat 1 51 0 2 1448 390 310 23 0 chr13 113154016 113154103 -7130209 - RSINE1 SINE B4 -76 89 1 2 1448 335 291 40 90 chr13 113154305 113154505 -7129807 - Charlie1b DNA MER1_type -22 501 312 2 1448 245 303 106 0 chr13 113154510 113154576 -7129736 + PB1D7 SINE Alu 17 89 -31 2 1448 261 173 58 0 chr13 113154644 113154696 -7129616 - Charlie1b DNA MER1_type -219 304 250 2 1448 201 154 0 0 chr13 113154800 113154839 -7129473 + T-rich Low_complexity Low_complexity 106 144 0 2 1448 773 59 238 33 chr13 113154840 113154962 -7129350 - B1_Mus1 SINE Alu 0 148 2 2 1448 26 50 0 0 chr13 113155353 113155393 -7128919 + AT_rich Low_complexity Low_complexity 1 40 0 2 1448 459 0 0 0 chr13 113155822 113155873 -7128439 + (TG)n Simple_repeat Simple_repeat 2 52 0 2 1448 237 33 0 0 chr13 113156322 113156352 -7127960 + (T)n Simple_repeat Simple_repeat 1 30 0 2 1448 228 216 92 26 chr13 113156710 113156786 -7127526 - Arthur1C DNA Tip100 -266 97 17 2 1448 214 300 24 36 chr13 113156823 113156906 -7127406 + B4 SINE B4 2 83 -209 2 1448 495 246 184 11 chr13 113156920 113157105 -7127207 - RMER5 LTR ERV1 -80 454 238 2 1448 237 298 82 12 chr13 113157135 113157220 -7127092 - RMER5 LTR ERV1 -370 164 74 2 1448 238 263 18 0 chr13 113157376 113157433 -7126879 + GA-rich Low_complexity Low_complexity 4 61 0 2 1448 724 185 0 37 chr13 113159330 113159465 -7124847 + B1_Mur1 SINE Alu 18 147 -2 2 1448 396 227 175 8 chr13 113159581 113159701 -7124611 - ID_B1 SINE B4 -7 217 78 2 1448 493 293 152 48 chr13 113159769 113160084 -7124228 + Charlie8 DNA MER1_type 50 397 -2031 2 1448 564 311 122 46 chr13 113160157 113160420 -7123892 - B4A SINE B4 -1 291 9 2 1448 915 141 69 29 chr13 113160421 113160577 -7123735 + ORR1C1 LTR MaLR 1 166 -212 2 1448 600 14 0 0 chr13 113160577 113160646 -7123666 + (TC)n Simple_repeat Simple_repeat 2 70 0 2 1448 915 127 644 9 chr13 113160646 113160782 -7123530 + ORR1C1 LTR MaLR 167 386 -8 2 1448 383 344 127 17 chr13 113161371 113161670 -7122642 - LTR31 LTR ERV1 -70 549 218 2 1448 536 235 65 14 chr13 113161804 113161942 -7122370 - B1F SINE Alu 0 149 5 2 1448 341 267 36 82 chr13 113161993 113162103 -7122209 + ID_B1 SINE B4 92 196 -28 2 1448 225 252 88 97 chr13 113162010 113162124 -7122188 + B1_Mm SINE Alu 29 141 -6 2 1448 262 360 92 20 chr13 113162119 113162272 -7122040 - MER67B LTR ERV1 -127 534 371 2 1448 606 304 133 82 chr13 113162395 113162800 -7121512 - MLT1J LTR MaLR -83 429 4 2 1448 237 353 0 57 chr13 113163269 113163392 -7120920 - MLT1A1 LTR MaLR -292 116 1 2 1448 490 305 116 12 chr13 113163441 113163700 -7120612 + B4A SINE B4 3 288 -4 3 1448 401 167 28 28 chr13 113163753 113163932 -7120380 + (CA)n Simple_repeat Simple_repeat 1 179 0 3 1448 219 206 43 14 chr13 113163952 113164021 -7120291 + (CA)n Simple_repeat Simple_repeat 2 72 0 3 1448 516 246 45 0 chr13 113164162 113164272 -7120040 - PB1D7 SINE Alu 0 120 6 3 1448 884 155 24 0 chr13 113164447 113164703 -7119609 + GA-rich Low_complexity Low_complexity 1 262 0 3 1448 535 248 30 30 chr13 113164705 113164838 -7119474 + ID_B1 SINE B4 81 213 -11 3 1448 282 308 286 17 chr13 113164904 113165145 -7119167 + LTR33A LTR ERVL 42 347 -173 3 1448 332 272 97 0 chr13 113165179 113165282 -7119030 + LTR33A LTR ERVL 406 518 -2 3 1448 731 233 0 12 chr13 113165669 113165817 -7118495 + RSINE1 SINE B4 3 148 -17 3 1448 393 102 0 0 chr13 113165817 113165876 -7118436 + (CATA)n Simple_repeat Simple_repeat 4 62 0 3 1448 731 233 0 12 chr13 113165876 113165892 -7118420 + RSINE1 SINE B4 149 164 -1 3 1448 276 128 21 0 chr13 113166779 113166826 -7117486 + PB1D7 SINE Alu 66 113 -7 3 1448 267 239 0 141 chr13 113166959 113167090 -7117222 - MIRm SINE MIR -123 153 45 3 1448 564 15 0 0 chr13 113167940 113168005 -7116307 + (TG)n Simple_repeat Simple_repeat 2 66 0 3 1448 335 327 6 31 chr13 113168073 113168234 -7116078 - MIR SINE MIR -47 215 59 3 1448 1161 199 0 23 chr13 113168331 113168552 -7115760 - B3 SINE B2 0 216 1 3 1448 698 204 42 14 chr13 113168976 113169120 -7115192 + B1_Mur2 SINE Alu 2 149 0 3 1448 186 118 0 0 chr13 113169120 113169154 -7115158 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 3 1448 214 304 28 38 chr13 113169193 113169299 -7115013 - MER5B DNA MER1_type -67 111 7 3 1448 310 307 0 13 chr13 113170902 113170978 -7113334 + RSINE1 SINE B4 17 91 -74 3 1448 441 0 0 0 chr13 113171105 113171154 -7113158 + (CA)n Simple_repeat Simple_repeat 1 49 0 3 1448 335 23 23 0 chr13 113171597 113171641 -7112671 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 3 1448 312 287 111 32 chr13 113171736 113171862 -7112450 + ID_B1 SINE B4 81 216 -8 3 1448 353 246 16 41 chr13 113171975 113172088 -7112224 - PB1D10 SINE Alu 0 120 7 3 1448 270 357 62 0 chr13 113172250 113172379 -7111933 - MIR SINE MIR -78 184 48 3 1448 458 227 109 0 chr13 113172381 113172491 -7111821 + B1F SINE Alu 2 123 -26 3 1448 387 252 100 23 chr13 113172382 113172512 -7111800 + ID_B1 SINE B4 84 223 -1 3 1448 297 0 0 0 chr13 113172608 113172641 -7111671 + (CA)n Simple_repeat Simple_repeat 2 34 0 3 1448 195 42 0 0 chr13 113174111 113174135 -7110177 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1448 23 0 0 0 chr13 113174222 113174245 -7110067 + AT_rich Low_complexity Low_complexity 1 23 0 3 1448 1263 27 7 0 chr13 113175902 113176048 -7108264 + B1_Mm SINE Alu 1 147 0 3 1448 379 333 0 16 chr13 113176653 113176778 -7107534 - MIRb SINE MIR -114 154 32 3 1448 235 235 90 45 chr13 113177626 113177715 -7106597 - RMER10A LTR ERVL -23 419 327 3 1448 229 278 20 30 chr13 113177792 113177861 -7106451 + GA-rich Low_complexity Low_complexity 2 70 0 3 1448 1139 107 6 0 chr13 113177861 113178039 -7106273 + (GGGA)n Simple_repeat Simple_repeat 2 180 0 3 1448 229 278 20 30 chr13 113178039 113178069 -7106243 + polypurine Low_complexity Low_complexity 71 100 0 3 1448 228 225 0 0 chr13 113178282 113178322 -7105990 + ID4 SINE ID 34 73 -10 3 1448 471 63 0 0 chr13 113178345 113178408 -7105904 + (CA)n Simple_repeat Simple_repeat 1 63 0 3 1448 296 282 0 0 chr13 113179211 113179282 -7105030 - B4A SINE B4 -173 119 49 3 1448 1408 130 0 5 chr13 113179390 113179607 -7104705 - RLTR11A LTR ERVK -312 216 1 3 1448 230 274 0 0 chr13 113180155 113180206 -7104106 + MER63D DNA AcHobo 311 361 -700 3 1448 470 242 45 30 chr13 113180287 113180419 -7103893 - B1_Mur2 SINE Alu -15 134 1 3 1448 234 247 11 45 chr13 113181029 113181118 -7103194 + MLT1A LTR MaLR 76 161 -213 3 1448 189 175 0 0 chr13 113181137 113181177 -7103135 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 3 1448 261 302 105 0 chr13 113181544 113181630 -7102682 - B1_Mus2 SINE Alu -51 96 2 3 1448 26 0 0 0 chr13 113181651 113181677 -7102635 + AT_rich Low_complexity Low_complexity 1 26 0 3 1448 216 132 174 8 chr13 113181745 113181803 -7102509 - L2b LINE L2 0 3387 3318 3 1448 537 314 5 7 chr13 113182019 113182179 -7102133 + ID_B1 SINE B4 84 243 -49 3 1448 444 243 26 26 chr13 113182180 113182294 -7102018 + B1F SINE Alu 10 123 -26 3 1448 2170 268 44 10 chr13 113182296 113182816 -7101496 + Lx5 LINE L1 6485 7022 -28 3 1448 531 0 0 0 chr13 113183370 113183429 -7100883 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 3 1448 842 154 0 27 chr13 113183429 113183567 -7100745 - B1_Mur3 SINE Alu -12 137 1 3 1448 935 88 79 24 chr13 113184152 113184316 -7099996 + B2_Mm1t SINE B2 10 182 -11 3 1448 775 235 43 15 chr13 113184837 113185102 -7099210 - RLTR28B LTR ERVL -230 294 1 3 1448 316 318 22 43 chr13 113185757 113185941 -7098371 - RLTR11A2 LTR ERVK -232 295 116 3 1448 191 300 42 14 chr13 113186606 113186677 -7097635 - MIR SINE MIR -177 85 13 3 1448 599 244 66 66 chr13 113187197 113187394 -7096918 + B3A SINE B2 2 198 0 3 1448 1029 123 0 3 chr13 113188661 113188982 -7095330 + (CA)n Simple_repeat Simple_repeat 1 320 0 3 1448 980 114 11 17 chr13 113189018 113189196 -7095116 + (TTTC)n Simple_repeat Simple_repeat 3 179 0 3 1448 1694 157 87 37 chr13 113189406 113189787 -7094525 - MTC LTR MaLR -32 389 1 3 1448 213 121 0 0 chr13 113190566 113190599 -7093713 + (TTTG)n Simple_repeat Simple_repeat 1 33 0 3 1448 1036 110 0 0 chr13 113190600 113190745 -7093567 - B1_Mus1 SINE Alu -2 146 2 3 1448 645 25 0 0 chr13 113191203 113191282 -7093030 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 1448 2102 60 26 16 chr13 113192749 113193053 -7091259 - IAPLTR2b LTR ERVK -20 307 1 3 1448 245 167 19 0 chr13 113193455 113193509 -7090803 + (TTG)n Simple_repeat Simple_repeat 3 57 0 3 1448 212 256 23 0 chr13 113193559 113193602 -7090710 - PB1 SINE Alu -73 54 11 3 1448 566 268 89 23 chr13 113193817 113194031 -7090281 + B4A SINE B4 4 231 -61 3 1448 4643 217 39 35 chr13 113194092 113194931 -7089381 + Lx7 LINE L1 6400 7246 -450 3 1448 1266 106 33 6 chr13 113194931 113195112 -7089200 - B2_Mm2 SINE B2 -7 188 3 3 1448 4643 217 39 35 chr13 113195112 113195316 -7088996 + Lx7 LINE L1 7247 7448 -248 3 1448 261 228 0 0 chr13 113195318 113195397 -7088915 + (TA)n Simple_repeat Simple_repeat 2 80 0 3 1448 879 209 25 53 chr13 113195412 113195655 -7088657 + Lx7 LINE L1 7461 7696 0 3 1448 315 203 0 0 chr13 113195895 113195964 -7088348 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1448 450 0 0 0 chr13 113195964 113196014 -7088298 + (GA)n Simple_repeat Simple_repeat 1 50 0 3 1448 370 302 50 16 chr13 113196055 113196100 -7088212 - B4 SINE B4 -26 266 224 3 1448 464 0 0 18 chr13 113196100 113196157 -7088155 + (TTTA)n Simple_repeat Simple_repeat 2 57 0 3 1448 370 302 50 16 chr13 113196157 113196232 -7088080 - B4 SINE B4 -69 223 143 3 1448 1937 151 87 60 chr13 113196255 113196587 -7087725 + RMER4A LTR ERVK 15 345 -121 3 1448 198 0 0 0 chr13 113196587 113196609 -7087703 + (TCTA)n Simple_repeat Simple_repeat 1 22 0 3 1448 1937 151 87 60 chr13 113196609 113196713 -7087599 + RMER4A LTR ERVK 346 462 -4 3 1448 281 298 57 64 chr13 113196720 113196860 -7087452 - B4 SINE B4 -152 140 2 3 1448 291 28 0 0 chr13 113198332 113198368 -7085944 + (CCA)n Simple_repeat Simple_repeat 1 36 0 3 1448 405 304 78 25 chr13 113199221 113199464 -7084848 + L1MC5 LINE L1 7634 7889 -72 3 1448 380 219 13 50 chr13 113199711 113199870 -7084442 + G-rich Low_complexity Low_complexity 1 153 0 3 1448 816 151 0 0 chr13 113200120 113200246 -7084066 + B1_Mur3 SINE Alu 14 139 -10 3 1448 717 176 93 12 chr13 113200328 113200500 -7083812 + ORR1C2 LTR MaLR 1 186 -198 3 1448 833 159 8 32 chr13 113200532 113200790 -7083522 + CT-rich Low_complexity Low_complexity 1 251 0 3 1448 709 208 104 40 chr13 113200790 113200918 -7083394 + ORR1C2 LTR MaLR 158 300 -84 3 1448 3983 55 36 6 chr13 113200918 113201415 -7082897 - RLTR1B LTR ERV1 0 512 1 3 1448 709 192 104 28 chr13 113201415 113201498 -7082814 + ORR1C2 LTR MaLR 301 384 0 3 1448 1798 194 53 24 chr13 113201842 113202279 -7082033 + RMER16 LTR ERVK 1 533 0 3 1448 272 338 0 0 chr13 113202757 113202831 -7081481 + C-rich Low_complexity Low_complexity 1 74 0 3 1448 1578 183 45 89 chr13 113202915 113203318 -7080994 - RLTR41 LTR ERV1 0 446 62 3 1448 334 261 52 87 chr13 113203780 113203817 -7080495 + ID_B1 SINE B4 54 219 -5 3 1448 589 204 22 22 chr13 113203817 113203952 -7080360 + B1F SINE Alu 10 144 -5 3 1448 279 306 152 22 chr13 113204059 113204243 -7080069 + MIRb SINE MIR 44 251 -17 3 1448 1264 34 0 0 chr13 113204707 113204855 -7079457 + B1_Mus1 SINE Alu 1 148 0 3 1448 270 176 0 0 chr13 113204855 113204906 -7079406 + GA-rich Low_complexity Low_complexity 2 52 0 3 1448 352 305 120 15 chr13 113204965 113205098 -7079214 + RSINE1 SINE B4 2 148 -17 3 1448 541 265 101 73 chr13 113205485 113205664 -7078648 + B3A SINE B2 1 184 -14 3 1448 960 66 42 49 chr13 113206418 113206561 -7077751 + B1_Mus1 SINE Alu 1 142 -6 3 1448 495 0 0 0 chr13 113206566 113206621 -7077691 + (GA)n Simple_repeat Simple_repeat 2 56 0 3 1448 231 253 76 0 chr13 113207477 113207556 -7076756 + Arthur1C DNA Tip100 83 167 -196 3 1448 244 250 152 17 chr13 113207660 113207778 -7076534 + Arthur1C DNA Tip100 219 352 -11 3 1448 468 0 0 0 chr13 113207972 113208024 -7076288 + (TC)n Simple_repeat Simple_repeat 2 53 0 3 1448 495 0 0 0 chr13 113208024 113208078 -7076234 + (TG)n Simple_repeat Simple_repeat 2 56 0 3 1448 381 277 56 14 chr13 113208636 113208779 -7075533 - B1F1 SINE Alu 0 149 1 3 1448 427 312 79 14 chr13 113209787 113209927 -7074385 + RSINE1 SINE B4 11 159 -6 3 1448 614 157 15 15 chr13 113209960 113210233 -7074079 + (CA)n Simple_repeat Simple_repeat 1 273 0 3 1448 247 361 61 7 chr13 113210619 113210767 -7073545 + MLT1L LTR MaLR 442 597 -13 3 1448 476 229 139 0 chr13 113211034 113211178 -7073134 - Cheshire DNA MER1_type -2172 248 85 3 1448 262 48 0 0 chr13 113211223 113211265 -7073047 + B3 SINE B2 175 216 0 4 1448 283 158 51 31 chr13 113211270 113211368 -7072944 + (TATATG)n Simple_repeat Simple_repeat 1 100 0 4 1448 931 264 75 12 chr13 113211393 113211826 -7072486 - L1M4 LINE L1 -605 5575 5126 4 1448 287 286 13 25 chr13 113211866 113211945 -7072367 - ID4_ SINE ID -4 79 2 4 1448 255 330 48 0 chr13 113212089 113212192 -7072120 + PB1D10 SINE Alu 1 108 -9 4 1448 234 62 0 0 chr13 113212995 113213027 -7071285 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 4 1448 270 345 22 22 chr13 113213053 113213145 -7071167 + RSINE1 SINE B4 2 93 -72 4 1448 682 190 20 3 chr13 113213277 113213423 -7070889 - B3 SINE B2 0 198 48 4 1448 3132 63 2 8 chr13 113213748 113214150 -7070162 + MTB LTR MaLR 1 400 0 4 1448 234 0 0 0 chr13 113214457 113214483 -7069829 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 1448 609 287 21 11 chr13 113214483 113214662 -7069650 - B3A SINE B2 -15 183 2 4 1448 350 302 20 13 chr13 113214667 113214818 -7069494 - L1M5 LINE L1 -509 5670 5519 4 1448 274 43 0 60 chr13 113215318 113215368 -7068944 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 4 1448 315 123 70 0 chr13 113215370 113215427 -7068885 - B1_Mur2 SINE Alu -12 137 77 4 1448 251 71 24 0 chr13 113217066 113217108 -7067204 + (GA)n Simple_repeat Simple_repeat 2 44 0 4 1448 198 0 0 0 chr13 113217322 113217344 -7066968 + (T)n Simple_repeat Simple_repeat 1 22 0 4 1448 926 108 0 0 chr13 113217453 113217592 -7066720 + B1_Mus2 SINE Alu 9 147 0 4 1448 363 60 0 0 chr13 113217592 113217642 -7066670 + (A)n Simple_repeat Simple_repeat 1 50 0 4 1448 987 93 0 0 chr13 113217698 113217838 -7066474 + (CA)n Simple_repeat Simple_repeat 2 141 0 4 1448 508 284 172 25 chr13 113218254 113218439 -7065873 + B4A SINE B4 2 206 -86 4 1448 225 0 0 0 chr13 113218439 113218464 -7065848 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1448 508 284 172 25 chr13 113218464 113218516 -7065796 + B4A SINE B4 207 274 -18 4 1448 1094 76 0 27 chr13 113218577 113218726 -7065586 + B1_Mus2 SINE Alu 1 145 -2 4 1448 639 286 42 0 chr13 113218859 113219027 -7065285 + B3 SINE B2 14 188 -28 4 1448 1182 97 0 0 chr13 113219027 113219255 -7065057 + (CA)n Simple_repeat Simple_repeat 1 228 0 4 1448 247 67 0 43 chr13 113219461 113219508 -7064804 + Lx7 LINE L1 7652 7696 0 4 1448 22 0 0 0 chr13 113219608 113219630 -7064682 + AT_rich Low_complexity Low_complexity 1 22 0 4 1448 340 274 72 40 chr13 113220117 113220269 -7064043 - L1MB5 LINE L1 0 6174 6018 4 1448 420 294 167 57 chr13 113220377 113220796 -7063516 + L1ME1 LINE L1 5633 6097 -82 4 1448 1110 98 86 0 chr13 113224619 113224793 -7059519 - B2_Mm2 SINE B2 -6 189 1 4 1448 1835 132 29 4 chr13 113224793 113225068 -7059244 - L1_Mur2 LINE L1 -85 5792 5511 4 1448 1113 86 1 5 chr13 113225068 113225244 -7059068 + MT2C_Mm LTR ERVL 1 169 -324 4 1448 734 242 64 0 chr13 113225244 113225401 -7058911 + Lx5 LINE L1 6193 6359 -691 4 1448 651 350 7 25 chr13 113225503 113225544 -7058768 + B4 SINE B4 6 46 -246 4 1448 252 0 0 0 chr13 113225544 113225572 -7058740 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1448 651 350 7 25 chr13 113225572 113225797 -7058515 + B4 SINE B4 47 270 -22 4 1448 189 0 0 0 chr13 113225797 113225818 -7058494 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 1448 651 350 7 25 chr13 113225818 113225834 -7058478 + B4 SINE B4 271 284 -8 4 1448 679 273 0 13 chr13 113226470 113226626 -7057686 + RSINE1 SINE B4 2 155 -10 4 1448 459 92 0 0 chr13 113226631 113226696 -7057616 + (CA)n Simple_repeat Simple_repeat 2 66 0 4 1448 261 221 152 0 chr13 113227299 113227389 -7056923 - MIRb SINE MIR 0 262 160 4 1448 273 193 70 0 chr13 113227403 113227460 -7056852 - MLT1A1 LTR MaLR -3 405 345 4 1448 896 256 94 108 chr13 113227653 113227811 -7056501 - RCHARR1 DNA MER1_type 0 974 810 4 1448 681 126 7 0 chr13 113227811 113227946 -7056366 - Lx3_Mus LINE L1 0 7009 6874 4 1448 896 256 94 108 chr13 113227946 113228203 -7056109 - RCHARR1 DNA MER1_type -165 809 565 4 1448 1330 302 25 34 chr13 113228207 113228653 -7055659 - RCHARR1 DNA MER1_type -529 445 4 4 1448 475 273 155 80 chr13 113229314 113229565 -7054747 + MTD LTR MaLR 136 405 -14 4 1448 1876 157 50 9 chr13 113230826 113231163 -7053149 - ORR1B2 LTR MaLR 0 367 17 4 1448 547 219 48 53 chr13 113231163 113231528 -7052784 + RMER17C LTR ERVK 1 394 -16 4 1448 585 76 0 0 chr13 113231529 113231608 -7052704 + (TTTC)n Simple_repeat Simple_repeat 3 81 0 4 1448 287 234 35 70 chr13 113232308 113232423 -7051889 - RLTR9A2 LTR ERVK -8 375 265 4 1448 387 355 50 0 chr13 113232715 113232915 -7051397 - MIR SINE MIR -45 217 8 4 1448 645 284 26 0 chr13 113233126 113233316 -7050996 - ID_B1 SINE B4 -5 219 25 4 1448 722 145 162 0 chr13 113234162 113234279 -7050033 + B1_Mur3 SINE Alu 2 137 -12 4 1448 687 25 0 0 chr13 113234279 113234360 -7049952 + (GAAA)n Simple_repeat Simple_repeat 4 84 0 4 1448 521 124 12 21 chr13 113235888 113236001 -7048311 - ORR1B1 LTR MaLR -298 96 5 4 1448 250 346 0 0 chr13 113236234 113236312 -7048000 - ID4 SINE ID -5 78 1 4 1448 456 198 93 19 chr13 113236554 113236662 -7047650 + RSINE1 SINE B4 6 121 -44 4 1448 920 102 0 7 chr13 113236669 113236817 -7047495 + (GAA)n Simple_repeat Simple_repeat 1 147 0 4 1448 297 0 0 0 chr13 113236867 113236900 -7047412 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1448 954 126 0 28 chr13 113236963 113237142 -7047170 + GA-rich Low_complexity Low_complexity 3 176 0 4 1448 477 0 0 0 chr13 113237142 113237195 -7047117 + (GAAAA)n Simple_repeat Simple_repeat 5 57 0 4 1448 497 318 96 20 chr13 113237196 113237498 -7046814 - MLT1B LTR MaLR -56 334 10 4 1448 1308 111 21 0 chr13 113238512 113238701 -7045611 + B2_Mm2 SINE B2 1 193 -2 4 1448 183 222 0 0 chr13 113238730 113238775 -7045537 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1448 1632 119 72 135 chr13 113238853 113238910 -7045402 - ORR1A2 LTR MaLR 0 327 273 4 1448 1164 68 0 7 chr13 113238910 113239058 -7045254 + B1_Mus1 SINE Alu 2 148 0 4 1448 1632 119 72 135 chr13 113239058 113239349 -7044963 - ORR1A2 LTR MaLR -55 272 1 4 1448 400 117 0 25 chr13 113239378 113239457 -7044855 + (CA)n Simple_repeat Simple_repeat 1 77 0 4 1448 254 347 85 45 chr13 113239951 113240174 -7044138 + MLT1C LTR MaLR 164 395 -72 4 1448 324 294 138 21 chr13 113240277 113240465 -7043847 + B4A SINE B4 63 272 -20 4 1448 225 94 0 0 chr13 113240772 113240804 -7043508 + (TC)n Simple_repeat Simple_repeat 2 33 0 4 1448 342 0 0 0 chr13 113240804 113240842 -7043470 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1448 792 21 0 0 chr13 113240842 113240935 -7043377 + (GA)n Simple_repeat Simple_repeat 2 95 0 4 1448 303 267 63 87 chr13 113241786 113241913 -7042399 + LTR16A LTR ERVL 279 402 -49 4 1448 198 326 82 0 chr13 113242160 113242258 -7042054 + MER5A DNA MER1_type 10 115 -74 4 1448 251 301 57 35 chr13 113242305 113242446 -7041866 + MLT1L LTR MaLR 153 296 -314 4 1448 258 136 0 0 chr13 113242576 113242620 -7041692 + (TTTC)n Simple_repeat Simple_repeat 3 46 0 4 1448 1120 111 0 11 chr13 113242620 113242802 -7041510 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 4 1448 268 299 0 38 chr13 113242802 113242882 -7041430 + polypyrimidine Low_complexity Low_complexity 2 78 0 4 1448 1377 136 9 18 chr13 113242936 113243161 -7041151 - URR1B DNA MER1_type 0 225 3 4 1448 2006 139 17 25 chr13 113243680 113244041 -7040271 - ORR1B1 LTR MaLR -8 386 29 4 1448 318 320 44 121 chr13 113244220 113244426 -7039886 + MIRb SINE MIR 69 258 -10 4 1448 253 275 116 0 chr13 113245436 113245505 -7038807 + PB1D7 SINE Alu 12 88 -32 4 1448 213 39 0 0 chr13 113245505 113245531 -7038781 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 4 1448 1560 52 16 0 chr13 113245590 113245781 -7038531 - B2_Mm2 SINE B2 -1 194 1 4 22 945 221 119 12 chr13 113246196 113246448 -7037864 - MTD LTR MaLR -129 290 12 4 1449 921 89 96 0 chr13 113246454 113246589 -7037723 + B1_Mus1 SINE Alu 1 148 0 4 1449 310 340 0 0 chr13 113246875 113246969 -7037343 + PB1D10 SINE Alu 1 94 -23 4 1449 367 52 17 17 chr13 113246970 113247029 -7037283 + (TG)n Simple_repeat Simple_repeat 2 60 0 4 1449 184 326 40 20 chr13 113247193 113247293 -7037019 - MIRb SINE MIR -44 224 123 4 1449 306 0 0 0 chr13 113248724 113248758 -7035554 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1449 718 139 13 0 chr13 113249417 113249568 -7034744 + (TG)n Simple_repeat Simple_repeat 2 154 0 4 1449 682 230 147 77 chr13 113249571 113249844 -7034468 - B4A SINE B4 0 292 1 4 1449 984 228 134 30 chr13 113249847 113250213 -7034099 - RCHARR1 DNA MER1_type -249 725 322 4 1449 462 36 0 0 chr13 113250899 113250955 -7033357 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1449 186 43 0 0 chr13 113250955 113250977 -7033335 + (CG)n Simple_repeat Simple_repeat 2 24 0 4 1449 207 0 0 0 chr13 113251900 113251923 -7032389 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 4 1449 846 228 17 6 chr13 113252168 113252349 -7031963 - B3A SINE B2 -15 183 1 4 1449 215 259 221 30 chr13 113252688 113252793 -7031519 - MIR SINE MIR -100 168 42 4 1449 220 156 0 43 chr13 113253558 113253605 -7030707 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1449 335 126 19 0 chr13 113256761 113256826 -7027486 + ID4_ SINE ID 4 70 -13 4 1449 294 98 0 0 chr13 113257480 113257531 -7026781 + (T)n Simple_repeat Simple_repeat 1 51 0 4 1449 1097 62 0 27 chr13 113257533 113257682 -7026630 - B1_Mus2 SINE Alu -2 145 1 4 1449 1282 130 5 0 chr13 113258292 113258476 -7025836 - B2_Mm1t SINE B2 -7 186 2 4 1449 200 59 56 56 chr13 113258698 113258788 -7025524 + (AGTAG)n Simple_repeat Simple_repeat 2 91 0 4 1449 195 100 0 0 chr13 113259689 113259719 -7024593 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1449 309 189 6 210 chr13 113260776 113260943 -7023369 + B1_Mus2 SINE Alu 9 141 -6 5 1449 358 204 109 30 chr13 113261212 113261313 -7022999 - MLT1C LTR MaLR -358 109 1 5 1449 296 242 0 0 chr13 113261355 113261417 -7022895 + MER58A DNA MER1_type 3 64 -160 5 1449 1419 152 9 0 chr13 113262165 113262388 -7021924 - URR1B DNA MER1_type 0 225 1 5 1449 319 232 61 0 chr13 113262651 113262733 -7021579 + Lx8 LINE L1 7383 7469 -4 5 1449 322 353 22 28 chr13 113262801 113262979 -7021333 + MIRc SINE MIR 16 192 -76 5 1449 607 102 0 0 chr13 113263744 113263832 -7020480 + B1_Mus2 SINE Alu 60 147 0 5 1449 444 329 52 72 chr13 113264500 113264887 -7019425 + LTR40b LTR ERVL 17 404 -58 5 1449 22 0 0 0 chr13 113265005 113265027 -7019285 + AT_rich Low_complexity Low_complexity 1 22 0 5 1449 23 0 0 0 chr13 113265359 113265382 -7018930 + AT_rich Low_complexity Low_complexity 1 23 0 5 1449 816 179 58 26 chr13 113265777 113265966 -7018346 - B3 SINE B2 -20 196 2 5 1449 471 284 0 0 chr13 113266337 113266432 -7017880 + PB1D10 SINE Alu 8 102 -15 5 1449 1563 265 145 20 chr13 113266461 113266747 -7017565 + L1MA6 LINE L1 3641 3936 -2207 5 1449 1404 64 0 36 chr13 113266747 113266941 -7017371 + B2_Mm2 SINE B2 2 188 -7 5 1449 1563 267 251 16 chr13 113266941 113267594 -7016718 + L1MA6 LINE L1 3937 4768 -1372 5 1449 2190 208 69 101 chr13 113267596 113268249 -7016063 + RMER1B Other Other 372 1003 -63 5 1449 436 194 62 36 chr13 113268341 113268453 -7015859 + RMER1A Other Other 916 1030 0 5 1449 687 282 157 75 chr13 113268456 113268671 -7015641 + L1MA6 LINE L1 4766 5007 -1139 5 1449 279 54 0 0 chr13 113268671 113268708 -7015604 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 5 1449 517 246 38 8 chr13 113268708 113268839 -7015473 - B1_Mur1 SINE Alu -14 135 1 5 1449 687 281 149 86 chr13 113268839 113269190 -7015122 + L1MA6 LINE L1 5005 5373 -770 5 1449 371 258 111 45 chr13 113269162 113269406 -7014906 + L1MA6 LINE L1 5877 6136 -164 5 1449 191 61 0 29 chr13 113270617 113270651 -7013661 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 5 1449 318 153 94 0 chr13 113270907 113270992 -7013320 + Lx9 LINE L1 7547 7639 -5 5 1449 245 306 36 36 chr13 113271084 113271196 -7013116 + PB1D10 SINE Alu 6 117 0 5 1449 189 0 0 0 chr13 113271363 113271384 -7012928 + (CA)n Simple_repeat Simple_repeat 2 22 0 5 1449 315 0 0 0 chr13 113271384 113271418 -7012894 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 1449 333 68 0 0 chr13 113271418 113271462 -7012850 + (GA)n Simple_repeat Simple_repeat 1 44 0 5 1449 1964 177 34 0 chr13 113272020 113272399 -7011913 - ORR1B1 LTR MaLR -2 392 1 5 1449 531 266 135 42 chr13 113272789 113273048 -7011264 + B4A SINE B4 3 285 -7 5 1449 247 262 93 23 chr13 113273108 113273194 -7011118 - L1ME2z LINE L1 -39 6405 6314 5 1449 1696 273 264 51 chr13 113274265 113275439 -7008873 + Tigger7 DNA MER2_type 62 1558 -933 5 1449 2365 181 49 18 chr13 113275439 113275950 -7008362 + RLTR11A2 LTR ERVK 1 527 0 5 1449 1696 273 264 51 chr13 113275950 113276427 -7007885 + Tigger7 DNA MER2_type 1559 2065 -426 5 1449 1736 187 29 50 chr13 113276444 113276827 -7007485 - ORR1C1 LTR MaLR 0 378 4 5 1449 1608 115 69 69 chr13 113276831 113277149 -7007163 - ORR1A3 LTR MaLR -8 318 1 5 1449 376 296 37 0 chr13 113277283 113277418 -7006894 + Tigger7 DNA MER2_type 2324 2463 -28 5 1449 208 0 62 0 chr13 113277421 113277453 -7006859 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1449 1193 55 0 0 chr13 113277453 113277598 -7006714 - B1_Mus1 SINE Alu -2 146 2 5 1449 350 292 22 11 chr13 113278301 113278391 -7005921 - ID_B1 SINE B4 -20 204 114 5 1449 196 329 42 28 chr13 113279483 113279555 -7004757 - L3 LINE CR1 -1156 3333 3261 5 1449 314 279 194 0 chr13 113279810 113279939 -7004373 - RSINE1 SINE B4 -10 155 2 5 1449 666 142 0 70 chr13 113281189 113281318 -7002994 + PB1D9 SINE Alu 1 120 0 5 1449 254 206 79 0 chr13 113281495 113281558 -7002754 + B2_Mm1t SINE B2 1 68 -125 5 1449 500 214 77 10 chr13 113281550 113281654 -7002658 + B3 SINE B2 104 214 -2 5 1449 303 267 13 0 chr13 113282016 113282091 -7002221 - B1F1 SINE Alu -54 95 20 5 1449 630 280 53 54 chr13 113282757 113283066 -7001246 + Tigger7 DNA MER2_type 2235 2490 -1 5 1449 448 269 19 0 chr13 113283360 113283468 -7000844 + PB1 SINE Alu 1 110 -17 5 1449 357 82 0 0 chr13 113283483 113283532 -7000780 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 5 1449 330 26 0 0 chr13 113283540 113283579 -7000733 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1449 615 256 73 30 chr13 113284459 113284648 -6999664 + B3 SINE B2 3 181 -14 5 1449 189 203 162 106 chr13 113285682 113285789 -6998523 + MIRb SINE MIR 39 156 -112 5 1449 1731 138 117 18 chr13 113286770 113287096 -6997216 - ORR1B2 LTR MaLR -9 358 1 5 1449 233 374 10 29 chr13 113287231 113287242 -6997070 - ID_B1 SINE B4 -20 204 105 5 1449 405 286 0 0 chr13 113287242 113287333 -6996979 - B1F1 SINE Alu -35 114 24 5 1449 752 147 58 7 chr13 113287677 113287814 -6996498 + B1_Mur4 SINE Alu 7 150 0 5 1449 1492 137 22 12 chr13 113288228 113288501 -6995811 - ORR1A2 LTR MaLR -62 332 2 5 1449 486 230 0 144 chr13 113288512 113288644 -6995668 + RSINE1 SINE B4 15 127 -38 5 1449 360 0 0 0 chr13 113288647 113288687 -6995625 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1449 570 29 0 0 chr13 113288687 113288754 -6995558 + (GA)n Simple_repeat Simple_repeat 2 69 0 5 1449 1414 62 11 6 chr13 113289998 113290177 -6994135 + B2_Mm2 SINE B2 2 181 -14 5 1449 1035 62 6 127 chr13 113290196 113290362 -6993950 - B1_Mus2 SINE Alu 0 147 2 5 1449 226 0 0 56 chr13 113292177 113292213 -6992099 + (GTTTG)n Simple_repeat Simple_repeat 2 35 0 5 1449 653 256 146 16 chr13 113292218 113292551 -6991761 - L1M4 LINE L1 -824 5322 4950 5 1449 291 259 82 10 chr13 113292679 113292775 -6991537 - PB1D10 SINE Alu 0 117 16 5 1449 324 0 0 0 chr13 113293234 113293270 -6991042 + (TCTG)n Simple_repeat Simple_repeat 3 38 0 5 1449 467 157 5 143 chr13 113295266 113295400 -6988912 - B1_Mus1 SINE Alu -3 117 1 5 1449 329 211 26 0 chr13 113295705 113295781 -6988531 - ID4_ SINE ID -4 79 2 5 1449 268 262 148 12 chr13 113295783 113295864 -6988448 - B1F1 SINE Alu -51 98 7 5 1449 199 104 42 0 chr13 113297402 113297450 -6986862 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 5 1449 296 150 32 0 chr13 113297463 113297524 -6986788 - B1_Mur4 SINE Alu 0 150 49 5 1449 3622 156 192 16 chr13 113297604 113298371 -6985941 - RMER19B LTR ERVK 0 902 1 5 1449 288 0 0 0 chr13 113299000 113299032 -6985280 + (TTG)n Simple_repeat Simple_repeat 2 33 0 5 1449 342 0 0 0 chr13 113299367 113299405 -6984907 + (CCA)n Simple_repeat Simple_repeat 2 39 0 5 1449 441 95 0 0 chr13 113301362 113301425 -6982887 + (CGTG)n Simple_repeat Simple_repeat 1 63 0 5 1449 324 0 0 0 chr13 113302293 113302329 -6981983 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1449 243 281 122 16 chr13 113302435 113302558 -6981754 + ORSL-2b DNA Tip100 114 249 -259 5 1449 253 301 14 0 chr13 113302604 113302677 -6981635 + PB1D10 SINE Alu 1 74 -43 5 1449 225 0 0 0 chr13 113303018 113303043 -6981269 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1449 180 0 0 0 chr13 113303043 113303062 -6981250 + (GA)n Simple_repeat Simple_repeat 2 21 0 5 1449 306 50 0 0 chr13 113303490 113303530 -6980782 + (TTGG)n Simple_repeat Simple_repeat 3 42 0 5 1449 1061 107 4 0 chr13 113303536 113303800 -6980512 + (TGGA)n Simple_repeat Simple_repeat 1 265 0 5 1449 306 274 72 45 chr13 113303853 113303964 -6980348 - PB1D7 SINE Alu 0 120 7 5 1449 446 289 165 22 chr13 113304356 113304586 -6979726 + MLT1D LTR MaLR 233 495 -10 5 1449 407 315 26 26 chr13 113304583 113304736 -6979576 + RSINE1 SINE B4 12 164 -1 5 1449 1406 132 23 5 chr13 113305845 113306066 -6978246 + URR1A DNA MER1_type 2 226 0 5 1449 753 22 0 0 chr13 113306090 113306181 -6978131 + (TC)n Simple_repeat Simple_repeat 2 92 0 5 1449 278 182 62 154 chr13 113306236 113306366 -6977946 - L1MA5 LINE L1 -43 6257 6140 5 1449 474 224 0 6 chr13 113307137 113307304 -6977008 + GA-rich Low_complexity Low_complexity 1 165 0 5 1449 3540 40 28 7 chr13 113307390 113307817 -6976495 - RLTR10C LTR ERVK 0 436 1 5 1449 540 192 84 12 chr13 113307845 113307975 -6976337 - B1_Mur2 SINE Alu -22 127 3 5 1449 3347 194 138 21 chr13 113308308 113309123 -6975189 + RMER1C Other Other 449 1334 -8 5 1449 2910 69 19 53 chr13 113310052 113310273 -6974039 - MTB LTR MaLR 0 400 188 5 1449 1203 61 7 0 chr13 113310273 113310420 -6973892 - B1_Mus1 SINE Alu 0 148 1 5 1449 2910 69 19 53 chr13 113310420 113310612 -6973700 - MTB LTR MaLR -213 187 1 5 1449 343 262 67 86 chr13 113310738 113310947 -6973365 - MER20 DNA MER1_type -12 207 3 5 1449 587 288 123 16 chr13 113311036 113311223 -6973089 - B4A SINE B4 -78 214 8 5 1449 431 259 129 67 chr13 113311311 113311551 -6972761 - Cheshire DNA MER1_type -2119 301 47 5 1449 661 189 105 19 chr13 113311878 113312042 -6972270 - B2_Mm2 SINE B2 -2 193 23 5 1449 1196 56 0 0 chr13 113312042 113312185 -6972127 - B1_Mm SINE Alu 0 147 5 5 1449 376 210 26 145 chr13 113312185 113312212 -6972100 - B3A SINE B2 -176 22 2 5 1449 453 19 0 0 chr13 113312750 113312804 -6971508 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1449 250 300 0 0 chr13 113313502 113313562 -6970750 + ID4 SINE ID 23 82 -1 5 1449 1330 104 22 0 chr13 113315338 113315521 -6968791 - B2_Mm1t SINE B2 -5 188 2 5 1449 2206 137 41 14 chr13 113316248 113316610 -6967702 + ORR1D1 LTR MaLR 3 374 0 5 1449 401 250 100 0 chr13 113316865 113316985 -6967327 + MER5A DNA MER1_type 2 133 -56 5 1449 496 331 97 76 chr13 113318232 113318706 -6965606 + MLT2B3 LTR ERVL 3 486 -68 5 1449 290 67 22 0 chr13 113318829 113318874 -6965438 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 6 1449 307 283 37 28 chr13 113318875 113318984 -6965328 - PB1D10 SINE Alu -7 110 1 6 1449 399 209 161 44 chr13 113319194 113319374 -6964938 + B3 SINE B2 2 202 -14 6 1449 270 0 0 0 chr13 113319374 113319404 -6964908 + (TAA)n Simple_repeat Simple_repeat 1 30 0 6 1449 25 31 0 0 chr13 113319595 113319627 -6964685 + AT_rich Low_complexity Low_complexity 1 32 0 6 1449 339 25 0 0 chr13 113319823 113319863 -6964449 + (ATTG)n Simple_repeat Simple_repeat 4 43 0 6 1449 485 118 25 0 chr13 113319863 113319956 -6964356 - B1_Mus2 SINE Alu -14 134 35 6 1449 346 244 49 37 chr13 113320750 113320912 -6963400 + L1M4 LINE L1 4991 5154 -992 6 1449 362 225 127 37 chr13 113320911 113321045 -6963267 + L1M4 LINE L1 5304 5449 -725 6 1449 252 268 141 0 chr13 113321076 113321147 -6963165 - ID4 SINE ID 0 83 3 6 1449 381 326 98 16 chr13 113321196 113321389 -6962923 + L1MB4 LINE L1 5971 6179 -1 6 1449 667 262 49 64 chr13 113322511 113322715 -6961597 + B4 SINE B4 82 282 -10 6 1449 237 257 19 55 chr13 113322849 113322928 -6961384 + MIR3 SINE MIR 85 156 -52 6 1449 681 262 40 51 chr13 113323406 113323659 -6960653 + Lx8 LINE L1 7213 7462 -11 6 1449 433 257 64 0 chr13 113324836 113324968 -6959344 + B4A SINE B4 3 155 -137 6 1449 581 204 40 91 chr13 113324982 113325181 -6959131 + B3A SINE B2 10 198 0 6 1449 253 154 0 0 chr13 113325188 113325227 -6959085 + PB1D9 SINE Alu 5 43 -77 6 1449 355 279 12 0 chr13 113325265 113325430 -6958882 + (CA)n Simple_repeat Simple_repeat 2 168 0 6 1449 446 267 0 16 chr13 113325478 113325661 -6958651 + (CA)n Simple_repeat Simple_repeat 1 180 0 6 1449 449 205 13 0 chr13 113325662 113325740 -6958572 + B4A SINE B4 206 284 -8 6 1449 487 318 33 22 chr13 113325867 113326047 -6958265 + MLT1C LTR MaLR 286 467 0 6 1449 1267 224 88 50 chr13 113326780 113327305 -6957007 + RMER4B LTR ERVK 4 585 0 6 1449 500 279 57 47 chr13 113327813 113328005 -6956307 - MER58A DNA MER1_type -6 218 25 6 1449 266 217 0 48 chr13 113328165 113328228 -6956084 + tRNA-Ala-GCY_ tRNA tRNA 7 66 -9 6 1449 601 236 161 10 chr13 113328274 113328467 -6955845 + ID_B1 SINE B4 2 223 -1 6 1449 290 327 91 57 chr13 113328507 113328682 -6955630 - MIRb SINE MIR -70 198 18 6 1449 230 316 10 20 chr13 113329208 113329308 -6955004 + RMER1C Other Other 1241 1339 -3 6 1449 206 180 0 39 chr13 113329342 113329394 -6954918 + GA-rich Low_complexity Low_complexity 6 55 0 6 1449 967 247 31 24 chr13 113329486 113329776 -6954536 + B4A SINE B4 1 292 0 6 1449 972 168 11 17 chr13 113329776 113330541 -6953771 + (CA)n Simple_repeat Simple_repeat 1 759 0 6 1449 360 0 23 0 chr13 113330541 113330584 -6953728 + HAL1-3A_ME LINE L1 1976 2019 -839 6 1449 321 272 0 0 chr13 113332381 113332459 -6951853 - ID4_ SINE ID -59 93 16 6 1449 414 297 85 68 chr13 113332568 113332596 -6951716 + B4A SINE B4 57 181 -111 6 1449 989 93 22 0 chr13 113332596 113332735 -6951577 + B1_Mur4 SINE Alu 9 150 0 6 1449 586 219 16 16 chr13 113333296 113333551 -6950761 + CT-rich Low_complexity Low_complexity 1 255 0 6 1449 378 0 0 0 chr13 113333668 113333710 -6950602 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1449 191 239 0 0 chr13 113334615 113334661 -6949651 - MIRb SINE MIR -43 225 180 6 1449 771 11 0 0 chr13 113335039 113335127 -6949185 + (GAA)n Simple_repeat Simple_repeat 2 89 0 6 1449 298 258 42 31 chr13 113336037 113336133 -6948179 - L1MEc LINE L1 -4270 2130 2034 6 1449 863 169 18 0 chr13 113336899 113337065 -6947247 - URR1A DNA MER1_type 0 226 58 6 1449 1017 165 0 6 chr13 113338107 113338272 -6946040 + Lx2B LINE L1 6482 6645 -355 6 1449 615 267 104 92 chr13 113338269 113338682 -6945630 + L1MB7 LINE L1 5765 6182 -2 6 1449 185 83 28 0 chr13 113338742 113338778 -6945534 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 6 1449 248 222 48 0 chr13 113338911 113338974 -6945338 + CT-rich Low_complexity Low_complexity 3 68 0 6 1449 1582 229 87 18 chr13 113338998 113339491 -6944821 - RLTR11A2 LTR ERVK 0 527 1 6 1449 743 144 48 0 chr13 113340159 113340284 -6944028 + B1_Mur4 SINE Alu 8 138 -12 6 1449 1275 175 109 88 chr13 113340648 113341024 -6943288 + ORR1C2 LTR MaLR 1 384 0 6 1449 183 340 19 0 chr13 113342122 113342175 -6942137 - L2 LINE L2 -2934 485 432 6 1449 1228 117 95 72 chr13 113342309 113342530 -6941782 - URR1A DNA MER1_type 0 226 1 6 1449 23 0 0 0 chr13 113342619 113342642 -6941670 + AT_rich Low_complexity Low_complexity 1 23 0 6 1449 752 152 121 0 chr13 113342643 113342775 -6941537 + B1_Mus1 SINE Alu 1 148 0 6 1449 2503 89 6 0 chr13 113343052 113343377 -6940935 - ORR1A2 LTR MaLR 0 327 1 6 1449 29 0 0 0 chr13 113343910 113343939 -6940373 + AT_rich Low_complexity Low_complexity 1 29 0 6 1449 321 121 17 33 chr13 113344059 113344119 -6940193 + B1_Mus2 SINE Alu 1 59 -88 6 1449 753 246 0 0 chr13 113344160 113344339 -6939973 + (CAGG)n Simple_repeat Simple_repeat 2 180 0 6 1449 255 308 0 0 chr13 113344301 113344379 -6939933 + GA-rich Low_complexity Low_complexity 3 80 0 6 1449 273 156 72 72 chr13 113344379 113344462 -6939850 + RLTR25B LTR ERVK 427 509 -519 6 1449 762 57 0 19 chr13 113344397 113344505 -6939807 + B1_Mus2 SINE Alu 42 147 0 6 1449 230 195 58 109 chr13 113344525 113344663 -6939649 + Charlie4a DNA MER1_type 334 464 -44 6 1449 1317 103 16 97 chr13 113344721 113344968 -6939344 - L1Md_F2 LINE L1 -2 6580 6354 6 1449 465 236 169 30 chr13 113345153 113345389 -6938923 + B4A SINE B4 2 270 -22 6 1449 203 138 0 0 chr13 113345437 113345466 -6938846 + (CA)n Simple_repeat Simple_repeat 1 29 0 6 1449 303 364 130 38 chr13 113345563 113346249 -6938063 + LTR81A LTR ERV1? 278 1232 -118 6 1449 477 252 40 59 chr13 113347112 113347316 -6936996 + B4A SINE B4 80 291 -1 6 1449 413 84 14 0 chr13 113347646 113347717 -6936595 + (CA)n Simple_repeat Simple_repeat 1 72 0 6 1449 315 260 147 13 chr13 113347717 113347873 -6936439 + L1MA5 LINE L1 5876 6052 -248 6 1449 290 215 12 172 chr13 113347886 113348049 -6936263 + L1MB7 LINE L1 5928 6064 -120 6 1449 524 259 90 30 chr13 113348088 113348255 -6936057 - B3A SINE B2 -18 180 4 6 1449 240 367 0 11 chr13 113348615 113348706 -6935606 + MLT1I LTR MaLR 40 129 -282 6 1449 440 264 62 0 chr13 113348846 113348990 -6935322 + RMER30 DNA MER1_type 13 165 -37 6 1449 294 261 0 0 chr13 113349038 113349107 -6935205 + RMER30 DNA MER1_type 133 201 -1 6 1449 222 118 0 0 chr13 113349543 113349577 -6934735 + (CATCC)n Simple_repeat Simple_repeat 2 35 0 6 1449 297 0 0 0 chr13 113349663 113349696 -6934616 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 6 1449 266 148 0 18 chr13 113350101 113350156 -6934156 + CT-rich Low_complexity Low_complexity 3 56 0 6 1449 436 207 137 8 chr13 113350199 113350316 -6933996 - B1F SINE Alu -17 132 1 6 1449 870 301 104 35 chr13 113350580 113351004 -6933308 + MER21B LTR ERV1 410 862 -1 6 1449 215 205 143 12 chr13 113351466 113351503 -6932809 + B4 SINE B4 43 90 -202 6 1449 245 208 50 38 chr13 113351503 113351583 -6932729 + PB1D10 SINE Alu 4 84 -33 6 1449 369 0 0 0 chr13 113351601 113351642 -6932670 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1449 378 0 0 0 chr13 113352675 113352717 -6931595 + (CA)n Simple_repeat Simple_repeat 1 42 0 6 1449 3040 91 5 2 chr13 113353698 113354104 -6930208 - MTB_Mm LTR MaLR 0 407 1 6 1449 530 266 21 21 chr13 113354479 113354621 -6929691 - B4A SINE B4 -76 216 75 6 1449 394 225 0 82 chr13 113354647 113354744 -6929568 - B4 SINE B4 -203 89 1 6 1449 210 299 82 0 chr13 113355172 113355269 -6929043 - MIRb SINE MIR -47 221 117 6 1449 21 0 0 0 chr13 113355603 113355624 -6928688 + AT_rich Low_complexity Low_complexity 1 21 0 6 1449 226 332 136 3 chr13 113356307 113356434 -6927878 - MIRc SINE MIR -21 241 107 6 1449 1745 168 40 120 chr13 113356459 113356687 -6927625 + MTC LTR MaLR 5 210 -211 6 1449 967 130 6 6 chr13 113356687 113356857 -6927455 + (GAA)n Simple_repeat Simple_repeat 1 170 0 6 1449 1745 182 43 120 chr13 113356857 113357091 -6927221 + MTC LTR MaLR 208 395 -26 6 1449 2667 264 123 54 chr13 113357707 113357930 -6926382 + Lx9 LINE L1 6176 6432 -1212 6 1449 2052 164 42 105 chr13 113357930 113358199 -6926113 - RMER4A LTR ERVK 0 466 230 6 1449 216 0 0 0 chr13 113358199 113358223 -6926089 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 6 1449 2052 164 42 105 chr13 113358223 113358450 -6925862 - RMER4A LTR ERVK -237 229 3 6 1449 2667 264 123 54 chr13 113358450 113359360 -6924952 + Lx9 LINE L1 6433 7387 -257 6 1449 23 0 0 0 chr13 113359516 113359539 -6924773 + AT_rich Low_complexity Low_complexity 1 23 0 6 1449 1124 306 80 30 chr13 113359683 113360185 -6924127 - MER82 DNA MER2_type -5 648 122 6 1449 325 238 109 0 chr13 113360185 113360286 -6924026 + HAL1 LINE L1 1286 1397 -1110 6 1449 321 227 28 85 chr13 113360308 113360414 -6923898 - MER82 DNA MER2_type -552 101 2 6 1449 23 0 0 0 chr13 113360582 113360605 -6923707 + AT_rich Low_complexity Low_complexity 1 23 0 6 1449 307 281 147 31 chr13 113360762 113360953 -6923359 + HAL1 LINE L1 1450 1662 -845 6 1449 510 291 26 13 chr13 113361235 113361388 -6922924 + RSINE1 SINE B4 5 159 -6 6 1449 47 19 0 0 chr13 113361405 113361459 -6922853 + AT_rich Low_complexity Low_complexity 1 54 0 6 1449 237 250 0 89 chr13 113361692 113361771 -6922541 + ID4_ SINE ID 1 72 -11 6 1449 623 234 9 78 chr13 113362321 113362553 -6921759 + B3 SINE B2 1 216 0 6 1449 29 28 0 0 chr13 113362555 113362591 -6921721 + AT_rich Low_complexity Low_complexity 1 36 0 6 1449 417 230 35 9 chr13 113362602 113362716 -6921596 + MTE2a LTR MaLR 263 379 0 6 1449 1466 273 89 35 chr13 113362716 113363426 -6920886 + L1MA5 LINE L1 5139 5905 -395 6 1449 300 111 0 0 chr13 113363455 113363500 -6920812 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1449 362 66 33 0 chr13 113363500 113363561 -6920751 + (CAGA)n Simple_repeat Simple_repeat 2 64 0 6 1449 4584 184 38 11 chr13 113363842 113364975 -6919337 + L1_Rod LINE L1 741 1925 -3922 6 1449 1016 76 170 42 chr13 113364975 113365140 -6919172 - B2_Mm2 SINE B2 -9 186 1 7 1449 4584 190 72 15 chr13 113365140 113365488 -6918824 + L1_Rod LINE L1 1926 2278 -3569 6 1449 528 93 0 0 chr13 113365514 113365589 -6918723 + (CA)n Simple_repeat Simple_repeat 2 76 0 7 1449 655 101 79 0 chr13 113365592 113365731 -6918581 + GA-rich Low_complexity Low_complexity 3 152 0 7 1449 1299 210 31 47 chr13 113365731 113366051 -6918261 + L1_Rod LINE L1 3590 3904 -1943 6 1449 11914 70 7 4 chr13 113366047 113368310 -6916002 - L1_Mus2 LINE L1 -3 6563 4294 7 1449 2655 86 24 16 chr13 113368303 113368550 -6915762 - LSU-rRNA_Hsa rRNA rRNA -1019 4016 3770 7 1449 1845 105 14 11 chr13 113368550 113368828 -6915484 + L1Md_F2 LINE L1 6300 6578 -4 7 1449 2655 86 24 16 chr13 113368828 113368958 -6915354 - LSU-rRNA_Hsa rRNA rRNA -1266 3769 3636 7 1449 5426 181 63 32 chr13 113368958 113370252 -6914060 + L1_Rod LINE L1 3880 5212 -635 6 1449 660 97 97 0 chr13 113370253 113370367 -6913945 + B1_Mus1 SINE Alu 23 147 -1 7 1449 854 234 40 14 chr13 113370369 113370633 -6913679 + L1_Rod LINE L1 5326 5654 -643 6 1449 1421 149 101 96 chr13 113371641 113371997 -6912315 - ORR1B1 LTR MaLR -2 392 35 7 1449 701 266 87 23 chr13 113372680 113372869 -6911443 - B4A SINE B4 -9 283 81 7 1449 288 0 0 0 chr13 113372869 113372901 -6911411 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 7 1449 701 266 87 23 chr13 113372901 113372976 -6911336 - B4A SINE B4 -212 80 3 7 1449 559 312 88 5 chr13 113373109 113373302 -6911010 - ID_B1 SINE B4 -11 213 5 7 1449 383 305 0 0 chr13 113373311 113373416 -6910896 - PB1D10 SINE Alu 0 117 13 7 1449 247 359 0 0 chr13 113373337 113373429 -6910883 - ID_B1 SINE B4 -52 172 81 7 1449 565 258 75 30 chr13 113373575 113373775 -6910537 - B3 SINE B2 -7 209 1 7 1449 2357 175 78 36 chr13 113373828 113374404 -6909908 - Lx9 LINE L1 0 7644 7045 7 1449 27 0 0 0 chr13 113374690 113374717 -6909595 + AT_rich Low_complexity Low_complexity 1 27 0 7 1449 782 309 151 12 chr13 113375448 113375858 -6908454 + MLT1F2 LTR MaLR 90 556 -4 7 1449 211 342 41 0 chr13 113376119 113376192 -6908120 + ID4_ SINE ID 7 82 -1 7 1449 541 293 136 19 chr13 113376265 113376582 -6907730 - ORR1E LTR MaLR -5 354 1 7 1449 2044 96 16 13 chr13 113376627 113376932 -6907380 + Lx LINE L1 6348 6653 -1 7 1449 197 65 32 0 chr13 113377116 113377147 -6907165 + (CA)n Simple_repeat Simple_repeat 1 32 0 7 181 700 275 140 36 chr13 113377165 113377501 -6906811 - Lx8 LINE L1 -84 7389 7019 7 1450 186 43 0 0 chr13 113377602 113377625 -6906687 + (TG)n Simple_repeat Simple_repeat 1 23 0 7 1450 605 208 48 0 chr13 113377848 113377973 -6906339 - RSINE1 SINE B4 -34 131 1 7 1450 875 133 42 0 chr13 113378012 113378155 -6906157 - B1_Mur4 SINE Alu 0 150 2 7 1450 465 348 19 72 chr13 113378294 113378557 -6905755 + B4A SINE B4 26 274 -18 7 1450 3583 149 158 50 chr13 113379006 113379804 -6904508 + RMER19B LTR ERVK 1 884 -18 7 1450 322 81 81 0 chr13 113379804 113379866 -6904446 + Lx LINE L1 6588 6654 0 7 1450 208 240 0 20 chr13 113380706 113380757 -6903555 + CT-rich Low_complexity Low_complexity 3 52 0 7 1450 291 257 14 0 chr13 113381787 113381857 -6902455 + ID4 SINE ID 2 72 -11 7 1450 603 159 41 12 chr13 113381866 113382038 -6902274 + CT-rich Low_complexity Low_complexity 1 177 0 7 1450 1090 212 45 34 chr13 113385969 113386238 -6898074 + RLTR16 LTR ERVK 1 272 -233 7 1450 1197 146 10 0 chr13 113386246 113386438 -6897874 - L1_Mur2 LINE L1 -2204 3673 3480 7 1450 6668 123 58 17 chr13 113386437 113388225 -6896087 + Lx LINE L1 4814 6654 0 7 1450 21 0 0 0 chr13 113389080 113389101 -6895211 + AT_rich Low_complexity Low_complexity 1 21 0 7 1450 2884 61 31 3 chr13 113390402 113390783 -6893529 - L1Md_F2 LINE L1 -13 6569 6178 7 1450 1502 48 27 0 chr13 113390920 113391107 -6893205 - B2_Mm1a SINE B2 -1 192 1 7 1450 468 123 0 0 chr13 113391176 113391249 -6893063 + (CA)n Simple_repeat Simple_repeat 2 74 0 7 1450 36 0 0 0 chr13 113391253 113391289 -6893023 + AT_rich Low_complexity Low_complexity 1 36 0 7 1450 234 81 0 0 chr13 113391866 113391903 -6892409 + (CAGAGA)n Simple_repeat Simple_repeat 3 39 0 7 1450 198 0 0 0 chr13 113391926 113391948 -6892364 + (CAAG)n Simple_repeat Simple_repeat 2 23 0 7 1450 418 226 198 16 chr13 113392779 113392905 -6891407 + B1F2 SINE Alu 1 149 0 7 1450 5407 114 53 2 chr13 113393196 113394021 -6890291 + Lx3B LINE L1 6104 6970 -3 7 1450 294 264 10 62 chr13 113394226 113394323 -6889989 - PB1D10 SINE Alu -3 114 23 7 1450 270 209 60 0 chr13 113394380 113394447 -6889865 + (CATATA)n Simple_repeat Simple_repeat 6 76 0 7 1450 26 101 0 0 chr13 113394572 113394661 -6889651 + AT_rich Low_complexity Low_complexity 1 89 0 7 1450 674 271 14 33 chr13 113395204 113395418 -6888894 + ID_B1 SINE B4 1 210 -14 7 1450 213 189 0 0 chr13 113395425 113395462 -6888850 + GA-rich Low_complexity Low_complexity 4 40 0 7 1450 510 162 115 102 chr13 113395946 113396172 -6888140 - Lx9 LINE L1 -3 7641 7413 7 1450 510 322 84 40 chr13 113397086 113397225 -6887087 + L1MA4A LINE L1 4738 4877 -1266 7 1450 717 241 0 0 chr13 113397225 113397362 -6886950 + B1_Mur2 SINE Alu 3 139 -10 7 1450 198 0 0 0 chr13 113397362 113397384 -6886928 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 7 1450 510 322 84 40 chr13 113397384 113397825 -6886487 + L1MA4A LINE L1 4878 5344 -799 7 1450 440 275 163 15 chr13 113397891 113398216 -6886096 + L1MA4A LINE L1 5487 5859 -444 7 1450 580 284 37 12 chr13 113398361 113398525 -6885787 + B4A SINE B4 38 205 -87 7 1450 867 254 84 4 chr13 113398535 113398808 -6885504 + Lx9 LINE L1 6359 6653 -991 7 1450 314 164 75 0 chr13 113398819 113398886 -6885426 + ORR1D1 LTR MaLR 4 75 -299 7 1450 1702 209 138 5 chr13 113398884 113399303 -6885009 + ORR1D1-int LTR MaLR 5 479 -891 7 1450 1559 258 113 28 chr13 113399341 113400016 -6884296 + Lx9 LINE L1 6703 7434 -210 7 1450 26 0 0 0 chr13 113400174 113400200 -6884112 + AT_rich Low_complexity Low_complexity 1 26 0 7 1450 595 265 212 35 chr13 113401802 113402033 -6882279 - B4 SINE B4 0 292 21 7 1450 593 208 20 0 chr13 113402048 113402149 -6882163 - PB1D9 SINE Alu -8 112 10 7 1450 1263 150 232 41 chr13 113402452 113402792 -6881520 + MTD LTR MaLR 1 405 -14 7 1450 23 0 0 0 chr13 113403024 113403047 -6881265 + AT_rich Low_complexity Low_complexity 1 23 0 7 1450 339 113 0 0 chr13 113403186 113403239 -6881073 - B1_Mur2 SINE Alu 0 149 97 7 1450 25 0 0 0 chr13 113403301 113403326 -6880986 + AT_rich Low_complexity Low_complexity 1 25 0 7 1450 264 222 0 0 chr13 113404273 113404327 -6879985 - Lx8 LINE L1 -979 6494 6441 7 1450 24 0 0 0 chr13 113404509 113404533 -6879779 + AT_rich Low_complexity Low_complexity 1 24 0 7 1450 730 168 48 8 chr13 113404630 113404756 -6879556 + B2_Mm2 SINE B2 1 131 -64 7 1450 3662 151 140 61 chr13 113404764 113405761 -6878551 + MurERV4_19-int LTR ERVK 4705 5780 0 7 1450 3214 158 101 96 chr13 113405761 113406596 -6877716 + RMER19B LTR ERVK 1 732 -170 7 1450 415 179 13 0 chr13 113406603 113406681 -6877631 + B2_Mm2 SINE B2 99 177 -18 7 1450 1862 226 108 13 chr13 113406776 113407306 -6877006 - RMER1C Other Other -8 1334 755 7 1450 357 336 73 73 chr13 113407844 113407907 -6876405 + MER45A DNA Tip100 1 56 -122 7 1450 2811 142 118 9 chr13 113407907 113408433 -6875879 + RMER4B LTR ERVK 3 585 0 7 1450 357 336 73 73 chr13 113408433 113408533 -6875779 + MER45A DNA Tip100 57 164 -14 7 1450 243 330 80 35 chr13 113408566 113408679 -6875633 + MLT1F1 LTR MaLR 134 251 -318 7 1450 2417 154 29 7 chr13 113408694 113409106 -6875206 + MTC LTR MaLR 1 421 0 7 1450 388 282 73 21 chr13 113409106 113409292 -6875020 + MLT1F1 LTR MaLR 372 567 -2 7 1450 494 308 8 8 chr13 113409435 113409556 -6874756 + PB1 SINE Alu 3 123 -4 7 1450 192 158 0 0 chr13 113409573 113409611 -6874701 + CT-rich Low_complexity Low_complexity 1 38 0 7 1450 525 278 71 41 chr13 113409671 113409840 -6874472 - B4A SINE B4 -118 174 1 7 1450 687 255 61 5 chr13 113409979 113410176 -6874136 - B3 SINE B2 -6 210 3 7 1450 434 315 73 7 chr13 113410218 113410368 -6873944 + RSINE1 SINE B4 4 163 -2 7 1450 306 295 143 0 chr13 113410427 113410532 -6873780 + PB1 SINE Alu 1 120 -7 7 1450 320 288 14 14 chr13 113410539 113410613 -6873699 + ID4_ SINE ID 8 81 -2 7 1450 1026 229 0 14 chr13 113411881 113412089 -6872223 + B3 SINE B2 3 207 -9 7 1450 23 0 0 0 chr13 113412612 113412635 -6871677 + AT_rich Low_complexity Low_complexity 1 23 0 7 1450 884 84 0 0 chr13 113412703 113412822 -6871490 - B1_Mus2 SINE Alu 0 147 29 7 1450 227 370 12 36 chr13 113413168 113413252 -6871060 + ID4_ SINE ID 1 82 -1 7 1450 685 280 118 21 chr13 113413602 113413839 -6870473 - MER68 LTR ERVL -232 331 72 7 1450 1071 264 63 0 chr13 113413884 113414202 -6870110 - MTEa LTR MaLR -38 341 4 7 1450 494 224 55 9 chr13 113414197 113414337 -6869975 - MTEa-int LTR MaLR -3 1577 1445 7 1450 23 33 0 0 chr13 113416059 113416089 -6868223 + AT_rich Low_complexity Low_complexity 1 30 0 7 1450 29 47 0 0 chr13 113416753 113416796 -6867516 + AT_rich Low_complexity Low_complexity 1 43 0 7 1450 25 31 0 0 chr13 113417241 113417273 -6867039 + AT_rich Low_complexity Low_complexity 1 32 0 7 1450 316 291 0 0 chr13 113417300 113417379 -6866933 + ID4_ SINE ID 2 80 -3 7 1450 31 44 0 0 chr13 113417459 113417504 -6866808 + AT_rich Low_complexity Low_complexity 1 45 0 7 1450 21 0 0 0 chr13 113417522 113417543 -6866769 + AT_rich Low_complexity Low_complexity 1 21 0 7 1450 270 95 0 0 chr13 113417595 113417637 -6866675 + B1_Mus2 SINE Alu 101 142 -5 7 1450 273 210 0 0 chr13 113417637 113417699 -6866613 + GA-rich Low_complexity Low_complexity 2 63 0 7 1450 252 0 0 0 chr13 113417804 113417832 -6866480 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 7 1450 1762 80 0 49 chr13 113417851 113418139 -6866173 + L1_Mus3 LINE L1 6346 6619 -19 7 1450 270 0 0 0 chr13 113418139 113418169 -6866143 + (GA)n Simple_repeat Simple_repeat 1 30 0 7 1450 666 0 0 0 chr13 113418169 113418242 -6866070 + (GGAAA)n Simple_repeat Simple_repeat 4 77 0 7 1450 1496 217 88 43 chr13 113420024 113420447 -6863865 - RMER1C Other Other -16 1326 885 7 1450 789 231 98 38 chr13 113420652 113420917 -6863395 + RMER20B LTR ERVK 133 413 -214 7 1450 222 37 0 0 chr13 113421195 113421222 -6863090 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1450 697 234 14 0 chr13 113421592 113421737 -6862575 - B1_Mur2 SINE Alu -1 148 2 8 1450 306 373 62 10 chr13 113421796 113421991 -6862321 - MIR SINE MIR -54 208 4 8 1450 764 250 196 26 chr13 113422326 113422404 -6861908 + MTEb LTR MaLR 3 86 -293 8 1450 684 0 0 0 chr13 113422404 113422480 -6861832 + (GAGAA)n Simple_repeat Simple_repeat 4 79 0 8 1450 764 250 196 26 chr13 113422480 113422713 -6861599 + MTEb LTR MaLR 87 366 -13 8 1450 432 245 54 45 chr13 113422904 113423015 -6861297 + PB1D7 SINE Alu 1 112 -8 8 1450 253 261 131 7 chr13 113423115 113423191 -6861121 - ID4 SINE ID -65 87 5 8 1450 545 302 8 0 chr13 113423690 113423819 -6860493 - RSINE1 SINE B4 0 165 36 8 1450 461 286 54 38 chr13 113424219 113424404 -6859908 + B3A SINE B2 2 189 -9 8 1450 718 260 82 14 chr13 113424695 113424902 -6859410 + B4A SINE B4 1 221 -71 8 1450 312 314 19 19 chr13 113424949 113425056 -6859256 + PB1 SINE Alu 1 107 -20 8 1450 447 299 33 53 chr13 113425774 113425926 -6858386 + RSINE1 SINE B4 3 151 -14 8 1450 247 299 138 0 chr13 113426849 113426936 -6857376 - RSINE1 SINE B4 -62 103 5 8 1450 679 158 117 0 chr13 113426953 113427073 -6857239 - B1_Mur1 SINE Alu -7 142 9 8 1450 439 269 103 34 chr13 113427073 113427092 -6857220 - ID_B1 SINE B4 0 189 69 8 1450 225 0 0 0 chr13 113427096 113427121 -6857191 + (TGG)n Simple_repeat Simple_repeat 1 25 0 8 1450 263 350 59 89 chr13 113427165 113427300 -6857012 - RSINE1 SINE B4 -2 163 33 8 1450 383 319 77 8 chr13 113427553 113427670 -6856642 + PB1 SINE Alu 1 125 -2 8 1450 288 0 0 0 chr13 113427799 113427831 -6856481 + (CA)n Simple_repeat Simple_repeat 2 33 0 8 1450 261 282 62 26 chr13 113428320 113428433 -6855879 - PB1D10 SINE Alu 0 117 1 8 1450 212 216 0 0 chr13 113428545 113428582 -6855730 + PB1D9 SINE Alu 2 38 -82 8 1450 545 243 50 35 chr13 113428792 113428933 -6855379 + B1F2 SINE Alu 7 149 0 8 1450 21 57 0 0 chr13 113428983 113429018 -6855294 + AT_rich Low_complexity Low_complexity 1 35 0 8 1450 3402 161 22 72 chr13 113429190 113430054 -6854258 + RMER1B Other Other 105 1052 -14 8 1450 420 144 180 36 chr13 113430330 113430421 -6853891 - PB1D10 SINE Alu -3 114 17 8 1450 297 297 37 52 chr13 113430425 113430560 -6853752 - YREP_Mm Unknown Unknown -1494 318 186 8 1450 636 204 0 0 chr13 113430452 113430565 -6853747 + ID_B1 SINE B4 108 220 -4 8 1450 345 300 11 0 chr13 113430828 113430918 -6853394 + PB1D10 SINE Alu 3 93 -24 8 1450 321 294 32 40 chr13 113430918 113430951 -6853361 + ID_B1 SINE B4 84 205 -19 8 1450 979 129 0 7 chr13 113431044 113431184 -6853128 + B1_Mur4 SINE Alu 2 140 -10 8 1450 271 0 0 49 chr13 113431184 113431225 -6853087 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 8 1450 241 269 99 79 chr13 113431562 113431663 -6852649 + B1F1 SINE Alu 28 130 -19 8 1450 604 284 17 22 chr13 113431821 113432001 -6852311 - MTD LTR MaLR -240 179 1 8 1450 336 271 117 7 chr13 113432445 113432590 -6851722 + RSINE1 SINE B4 3 163 -2 8 1450 501 242 61 24 chr13 113433398 113433563 -6850749 + L1MB3 LINE L1 5960 6130 -53 8 1450 975 212 43 5 chr13 113433592 113433663 -6850649 + B3 SINE B2 1 71 -145 8 1450 405 0 0 0 chr13 113433663 113433708 -6850604 + (CA)n Simple_repeat Simple_repeat 1 45 0 8 1450 975 212 43 5 chr13 113433708 113433844 -6850468 + B3 SINE B2 72 215 -1 8 1450 306 271 182 23 chr13 113433868 113434000 -6850312 + RSINE1 SINE B4 1 153 -12 8 1450 1048 274 275 4 chr13 113434918 113435409 -6848903 - MER44D DNA MER2_type -80 625 2 8 1450 32 0 0 0 chr13 113435567 113435599 -6848713 + AT_rich Low_complexity Low_complexity 1 32 0 8 1450 318 247 106 0 chr13 113435599 113435684 -6848628 + MER58A DNA MER1_type 12 105 -119 8 1450 227 265 45 57 chr13 113436064 113436152 -6848160 + RLTR25A LTR ERVK 493 579 -524 8 1450 358 301 140 37 chr13 113438093 113438393 -6845919 - Lx8 LINE L1 0 7473 7143 8 1450 275 308 150 23 chr13 113438393 113438526 -6845786 + MLT1D LTR MaLR 42 191 -314 8 1450 238 296 135 20 chr13 113438607 113438755 -6845557 + MLT1D LTR MaLR 303 467 0 8 1450 180 152 0 0 chr13 113440169 113440202 -6844110 + GA-rich Low_complexity Low_complexity 5 37 0 8 1450 21 0 0 0 chr13 113440404 113440425 -6843887 + AT_rich Low_complexity Low_complexity 1 21 0 8 1450 315 71 0 0 chr13 113441628 113441670 -6842642 + (A)n Simple_repeat Simple_repeat 1 42 0 8 1450 28 0 0 0 chr13 113441775 113441803 -6842509 + AT_rich Low_complexity Low_complexity 1 28 0 8 1450 208 125 50 0 chr13 113442835 113442875 -6841437 + A-rich Low_complexity Low_complexity 2 43 0 8 1450 625 127 9 18 chr13 113442881 113442993 -6841319 + B1_Mus2 SINE Alu 37 147 0 8 1450 374 257 138 0 chr13 113443783 113443892 -6840420 + ID_B1 SINE B4 93 216 -8 8 1450 341 275 7 161 chr13 113443940 113444016 -6840296 + RSINE1 SINE B4 45 116 -49 8 1450 291 28 0 0 chr13 113444016 113444052 -6840260 + (CA)n Simple_repeat Simple_repeat 2 37 0 8 1450 341 275 7 161 chr13 113444052 113444118 -6840194 + RSINE1 SINE B4 117 165 0 8 1450 23 54 0 0 chr13 113444156 113444193 -6840119 + AT_rich Low_complexity Low_complexity 1 37 0 8 1450 2889 40 70 5 chr13 113444415 113444787 -6839525 - MTA_Mm LTR MaLR 0 396 1 8 1450 327 268 12 0 chr13 113444936 113445018 -6839294 - ID4_ SINE ID 0 83 1 8 1450 337 310 86 82 chr13 113445038 113445330 -6838982 - MLT1H1 LTR MaLR -196 359 67 8 1450 549 278 106 70 chr13 113445506 113445783 -6838529 - L1M3f LINE L1 -4101 2005 1723 8 1450 1495 275 8 5 chr13 113445783 113446152 -6838160 + ORR1D2 LTR MaLR 1 370 0 8 1450 549 278 106 70 chr13 113446152 113446431 -6837881 - L1M3f LINE L1 -4384 1722 1430 8 1450 315 273 140 58 chr13 113447107 113447278 -6837034 - L1M3f LINE L1 -6761 269 85 8 1450 246 235 0 0 chr13 113447298 113447349 -6836963 + RMER30 DNA MER1_type 1 51 -151 8 1450 823 172 20 14 chr13 113447832 113447979 -6836333 + B1_Mur1 SINE Alu 2 149 0 8 1450 981 259 53 32 chr13 113448033 113448316 -6835996 - B4 SINE B4 0 292 4 8 1450 258 156 0 0 chr13 113448595 113448640 -6835672 + (CTA)n Simple_repeat Simple_repeat 1 45 0 8 1450 324 274 66 0 chr13 113448640 113448746 -6835566 + ID_B1 SINE B4 112 224 0 8 1450 1582 147 72 0 chr13 113448902 113449195 -6835117 + MTC LTR MaLR 105 418 -3 8 1450 298 248 48 38 chr13 113449958 113450063 -6834249 + MIRc SINE MIR 39 144 -124 8 1450 237 220 0 0 chr13 113450286 113450336 -6833976 + G-rich Low_complexity Low_complexity 1 50 0 8 1450 851 118 13 71 chr13 113450343 113450498 -6833814 + B1_Mus1 SINE Alu 3 148 0 8 1450 241 152 103 29 chr13 113451477 113451545 -6832767 - ID4 SINE ID -9 74 2 8 1450 275 224 20 23 chr13 113452054 113452142 -6832170 + B4 SINE B4 2 86 -206 8 1450 195 42 0 0 chr13 113452297 113452321 -6831991 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 8 1450 543 273 69 32 chr13 113453685 113453874 -6830438 - MLT1A1 LTR MaLR 0 408 213 8 1450 199 54 54 0 chr13 113454973 113455010 -6829302 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 8 1450 675 65 0 18 chr13 113455772 113455882 -6828430 - L1_Mus3 LINE L1 0 6638 6531 8 1450 216 0 0 0 chr13 113455938 113455962 -6828350 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 8 1450 756 135 85 0 chr13 113456117 113456258 -6828054 + URR1A DNA MER1_type 72 224 -2 8 1450 209 333 10 10 chr13 113456610 113456707 -6827605 + L2c LINE L2 3289 3385 -2 8 1450 233 314 55 25 chr13 113457885 113458048 -6826264 - L1ME3B LINE L1 -18 6222 6055 8 1450 183 308 140 59 chr13 113458806 113459113 -6825199 - L2 LINE L2 -741 2678 2347 8 1450 21 89 0 0 chr13 113459724 113459780 -6824532 + AT_rich Low_complexity Low_complexity 1 56 0 8 1450 372 306 119 31 chr13 113460394 113460566 -6823746 + B4A SINE B4 3 179 -113 8 1450 234 0 0 0 chr13 113460566 113460592 -6823720 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 8 1450 372 306 119 31 chr13 113460592 113460679 -6823633 + B4A SINE B4 180 285 -7 8 1450 426 255 9 18 chr13 113460737 113460849 -6823463 + PB1D10 SINE Alu 7 117 0 8 1450 254 51 0 49 chr13 113460849 113460890 -6823422 + (GAAAA)n Simple_repeat Simple_repeat 1 39 0 8 1450 436 322 54 0 chr13 113460914 113461063 -6823249 + RSINE1 SINE B4 2 158 -7 8 1450 202 291 0 0 chr13 113461070 113461125 -6823187 + GA-rich Low_complexity Low_complexity 2 56 0 8 1450 636 221 16 0 chr13 113461274 113461401 -6822911 + B1_Mur2 SINE Alu 1 129 -20 8 1450 204 97 0 0 chr13 113461412 113461443 -6822869 + (TAGG)n Simple_repeat Simple_repeat 3 33 0 8 1450 1044 227 5 19 chr13 113461493 113461700 -6822612 + B3 SINE B2 1 204 -12 8 1450 324 304 155 39 chr13 113461789 113462227 -6822085 - Kanga1 DNA Tc2 -113 1632 1144 8 1450 590 258 142 0 chr13 113462405 113462595 -6821717 + B4A SINE B4 7 223 -69 8 1450 207 0 0 0 chr13 113462635 113462658 -6821654 + (GA)n Simple_repeat Simple_repeat 1 23 0 8 1450 390 317 18 36 chr13 113462899 113463066 -6821246 + L1MC4a LINE L1 5763 5926 -1956 8 1450 183 80 0 0 chr13 113463965 113463990 -6820322 + (TATG)n Simple_repeat Simple_repeat 2 26 0 8 1450 834 198 0 0 chr13 113463986 113464158 -6820154 + (CATATA)n Simple_repeat Simple_repeat 2 173 0 8 1450 260 217 0 16 chr13 113464874 113464942 -6819370 - ID4_ SINE ID -62 90 24 8 1450 219 313 12 24 chr13 113465898 113465983 -6818329 + CT-rich Low_complexity Low_complexity 3 86 0 8 1450 481 268 8 23 chr13 113466663 113466793 -6817519 + B4 SINE B4 1 128 -164 8 1450 482 171 56 19 chr13 113466863 113466970 -6817342 + PB1D10 SINE Alu 7 117 0 8 1450 222 118 0 0 chr13 113466970 113467004 -6817308 + (A)n Simple_repeat Simple_repeat 1 34 0 8 1450 289 303 13 0 chr13 113467141 113467217 -6817095 - ID4 SINE ID -3 80 4 8 1450 459 202 0 0 chr13 113467256 113467355 -6816957 + (TATG)n Simple_repeat Simple_repeat 3 101 0 9 1450 288 299 0 20 chr13 113467750 113467849 -6816463 + CT-rich Low_complexity Low_complexity 2 98 0 9 1450 1090 122 122 0 chr13 113468107 113468303 -6816009 - URR1A DNA MER1_type -5 221 2 9 1450 362 233 35 0 chr13 113468538 113468624 -6815688 + B3 SINE B2 104 192 -24 9 1450 1389 208 65 46 chr13 113468806 113469113 -6815199 - Lx5 LINE L1 0 7050 6738 9 1450 375 83 0 0 chr13 113469176 113469236 -6815076 + (TCTCTG)n Simple_repeat Simple_repeat 6 65 0 9 1450 302 194 83 0 chr13 113469237 113469309 -6815003 - HAL1-3A_ME LINE L1 -846 2012 1935 9 1450 954 222 20 5 chr13 113470204 113470408 -6813904 + B3 SINE B2 3 209 -7 9 1450 594 241 38 0 chr13 113470836 113470969 -6813343 - B1F SINE Alu -7 142 5 9 1450 459 0 0 0 chr13 113471185 113471236 -6813076 + (CA)n Simple_repeat Simple_repeat 1 51 0 9 1450 700 297 62 33 chr13 113471594 113471838 -6812474 + B4A SINE B4 1 251 -41 9 1450 227 31 0 30 chr13 113471849 113471882 -6812430 + (CA)n Simple_repeat Simple_repeat 1 32 0 9 1450 215 343 67 56 chr13 113472243 113472422 -6811890 - L2a LINE L2 -262 3164 2984 9 1450 396 0 0 0 chr13 113472797 113472841 -6811471 + (TG)n Simple_repeat Simple_repeat 2 45 0 9 1450 670 244 101 51 chr13 113474661 113474937 -6809375 - B4A SINE B4 -1 291 2 9 1450 298 295 107 0 chr13 113477213 113477335 -6806977 - ID_B1 SINE B4 -6 218 84 9 1450 23 0 0 0 chr13 113477393 113477416 -6806896 + AT_rich Low_complexity Low_complexity 1 23 0 9 1450 495 0 0 0 chr13 113477827 113477882 -6806430 + (TTA)n Simple_repeat Simple_repeat 2 56 0 9 1450 217 182 14 43 chr13 113478333 113478402 -6805910 + T-rich Low_complexity Low_complexity 5 71 0 9 1450 218 309 0 0 chr13 113479221 113479276 -6805036 + B1F2 SINE Alu 7 61 -88 9 1450 546 299 19 63 chr13 113479848 113480055 -6804257 - B3A SINE B2 0 198 1 9 1450 422 211 65 22 chr13 113480067 113480159 -6804153 + B1F SINE Alu 18 113 -36 9 1450 378 0 0 0 chr13 113480556 113480598 -6803714 + (TG)n Simple_repeat Simple_repeat 1 42 0 9 1450 555 16 0 0 chr13 113480736 113480800 -6803512 + (TTATA)n Simple_repeat Simple_repeat 3 66 0 9 1450 275 246 86 17 chr13 113481131 113481247 -6803065 + L1M3 LINE L1 3566 3689 -2451 9 1450 291 175 0 0 chr13 113481586 113481643 -6802669 + GA-rich Low_complexity Low_complexity 2 58 0 9 1450 610 235 133 5 chr13 113482196 113482384 -6801928 + B3 SINE B2 2 213 -3 9 1450 954 122 0 0 chr13 113482482 113482746 -6801566 + (TG)n Simple_repeat Simple_repeat 1 264 0 9 1450 747 45 133 9 chr13 113482848 113482961 -6801351 + B1_Mus2 SINE Alu 21 147 0 9 1450 347 232 0 28 chr13 113484126 113484197 -6800115 + ID4_ SINE ID 2 70 -13 9 1450 264 149 0 0 chr13 113484200 113484247 -6800065 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 9 1450 203 204 20 0 chr13 113484336 113484385 -6799927 + T-rich Low_complexity Low_complexity 4 53 0 9 1450 727 106 0 0 chr13 113484385 113484498 -6799814 - B1_Mus1 SINE Alu 0 148 36 9 1450 383 240 69 30 chr13 113484797 113484909 -6799403 - B1F1 SINE Alu -27 122 7 9 1450 329 271 72 10 chr13 113485035 113485132 -6799180 + PB1D7 SINE Alu 6 108 -12 9 1450 252 306 45 18 chr13 113486259 113486369 -6797943 - Lx8 LINE L1 -311 7162 7050 9 1450 183 42 0 0 chr13 113486439 113486463 -6797849 + (ATTTG)n Simple_repeat Simple_repeat 1 24 0 9 1450 339 267 22 0 chr13 113486570 113486660 -6797652 - RSINE1 SINE B4 0 165 74 9 1450 262 241 176 0 chr13 113486954 113487062 -6797250 - L1MC LINE L1 -1545 4601 4475 9 1450 21 36 0 0 chr13 113487952 113487980 -6796332 + AT_rich Low_complexity Low_complexity 1 28 0 9 1450 217 250 18 0 chr13 113488555 113488611 -6795701 + RSINE1 SINE B4 43 99 -66 9 1450 1120 70 12 16 chr13 113488628 113488889 -6795423 + (TAGA)n Simple_repeat Simple_repeat 1 260 0 9 1450 595 290 13 0 chr13 113489182 113489337 -6794975 + RSINE1 SINE B4 3 159 -6 9 1450 192 77 0 0 chr13 113491020 113491046 -6793266 + (T)n Simple_repeat Simple_repeat 1 26 0 9 1450 300 167 45 15 chr13 113492212 113492279 -6792033 + ID_B1 SINE B4 107 175 -49 9 1450 180 0 0 0 chr13 113492374 113492394 -6791918 + (TCCA)n Simple_repeat Simple_repeat 3 22 0 9 1450 251 317 0 47 chr13 113493047 113493133 -6791179 + ID4 SINE ID 1 82 -1 9 1450 267 289 142 2 chr13 113493945 113494054 -6790258 + PB1D7 SINE Alu 1 120 0 9 1450 718 155 13 72 chr13 113494275 113494428 -6789884 + B1_Mur1 SINE Alu 1 144 -5 9 1450 600 157 0 50 chr13 113495052 113495173 -6789139 + PB1D9 SINE Alu 6 120 0 9 1450 399 298 164 7 chr13 113495350 113495502 -6788810 + B3A SINE B2 9 184 -14 9 1450 942 113 0 14 chr13 113496013 113496157 -6788155 - MTC LTR MaLR 0 421 280 9 1450 346 294 191 38 chr13 113496293 113496586 -6787726 + L2a LINE L2 2483 2820 -599 9 1450 211 264 19 19 chr13 113496613 113496667 -6787645 + PB1 SINE Alu 74 127 0 9 1450 288 325 132 19 chr13 113496696 113496960 -6787352 + L2a LINE L2 2847 3131 -295 9 1450 216 0 0 0 chr13 113497242 113497266 -6787046 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9 1450 686 222 52 0 chr13 113497348 113497501 -6786811 + RSINE1 SINE B4 4 164 -1 9 1450 504 160 0 0 chr13 113497502 113497602 -6786710 + (CA)n Simple_repeat Simple_repeat 1 100 0 9 1450 343 240 105 24 chr13 113498455 113498579 -6785733 - B1_Mus2 SINE Alu -13 134 1 9 1450 468 277 8 16 chr13 113498629 113498750 -6785562 + PB1D7 SINE Alu 1 120 0 9 1450 180 77 0 0 chr13 113498751 113498777 -6785535 + (A)n Simple_repeat Simple_repeat 1 26 0 9 1450 287 198 54 56 chr13 113499138 113499244 -6785068 - B1F SINE Alu -14 106 2 9 1450 477 261 65 0 chr13 113499661 113499799 -6784513 + L1MB8 LINE L1 5686 5832 -346 9 1450 332 222 111 0 chr13 113499790 113499898 -6784414 + L1MB8 LINE L1 6059 6178 0 9 1450 231 36 0 0 chr13 113500337 113500365 -6783947 + (CATGC)n Simple_repeat Simple_repeat 4 31 0 1 1450 633 265 142 5 chr13 113500746 113500943 -6783369 + ID_B1 SINE B4 1 224 0 2 1450 406 279 18 0 chr13 113501052 113501163 -6783149 - LTR16B1 LTR ERVL 0 480 368 3 1450 404 349 74 16 chr13 113501212 113501454 -6782858 - LTR16B1 LTR ERVL -216 264 9 3 1450 513 161 182 25 chr13 113502957 113503078 -6781234 - B1F SINE Alu -8 141 2 4 1450 288 0 0 0 chr13 113503217 113503249 -6781063 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1450 44 35 0 0 chr13 113503765 113503823 -6780489 + AT_rich Low_complexity Low_complexity 1 58 0 6 1450 646 301 19 13 chr13 113504615 113504773 -6779539 - MER58A DNA MER1_type -32 192 34 7 1450 633 255 104 42 chr13 113504776 113505018 -6779294 + L1MEc LINE L1 2207 2476 -3863 8 1450 458 250 0 7 chr13 113505484 113505621 -6778691 + GA-rich Low_complexity Low_complexity 3 138 0 9 1450 243 0 0 0 chr13 113505671 113505698 -6778614 + (CAGGG)n Simple_repeat Simple_repeat 3 29 0 1 1450 341 297 20 0 chr13 113505699 113505800 -6778512 + RSINE1 SINE B4 28 130 -35 1 1450 1092 74 0 0 chr13 113505851 113505986 -6778326 + B1_Mus2 SINE Alu 2 136 -11 1 1450 1045 276 73 55 chr13 113506025 113506454 -6777858 + L1MEc LINE L1 2648 3095 -3224 8 1450 1597 37 11 0 chr13 113506454 113506644 -6777668 + B2_Mm1a SINE B2 2 193 0 1 1450 1045 276 73 55 chr13 113506644 113506762 -6777550 + L1MEc LINE L1 3096 3205 -3114 8 1450 241 306 65 24 chr13 113506781 113506905 -6777407 + B1F SINE Alu 21 149 0 1 1450 384 295 0 21 chr13 113506809 113506906 -6777406 + ID_B1 SINE B4 130 224 0 1 1450 510 211 110 0 chr13 113506964 113507073 -6777239 - B1_Mur1 SINE Alu -2 147 27 1 1450 591 292 89 5 chr13 113507090 113507293 -6777019 + Tigger6b DNA MER2_type 1 220 -1377 1 1450 430 319 104 71 chr13 113507316 113507410 -6776902 + Tigger6b DNA MER2_type 1293 1383 -214 1 1450 286 191 206 0 chr13 113507410 113507478 -6776834 - ID4_ SINE ID -1 82 1 1 1450 430 319 104 71 chr13 113507478 113507663 -6776649 + Tigger6b DNA MER2_type 1384 1581 -16 1 1451 527 292 36 7 chr13 113508600 113508738 -6775574 - RSINE1 SINE B4 -8 157 16 1 1451 213 232 89 0 chr13 113508800 113508856 -6775456 - MIR SINE MIR -6 256 196 2 1451 424 303 62 57 chr13 113510292 113510502 -6773810 + MIRb SINE MIR 26 236 -32 2 1451 213 307 136 0 chr13 113510912 113511000 -6773312 - L2a LINE L2 -27 3399 3300 2 1451 647 324 0 0 chr13 113511117 113511299 -6773013 + B3A SINE B2 1 182 -16 2 1451 293 256 12 37 chr13 113511813 113511894 -6772418 - B4A SINE B4 -213 79 1 2 1451 294 121 176 29 chr13 113511930 113511998 -6772314 + B3 SINE B2 2 79 -137 2 1451 222 37 0 0 chr13 113513232 113513259 -6771053 + (TG)n Simple_repeat Simple_repeat 2 28 0 2 1451 636 129 0 0 chr13 113513758 113513859 -6770453 + (GAAA)n Simple_repeat Simple_repeat 4 104 0 2 1451 213 312 35 6 chr13 113514547 113514721 -6769591 + (CA)n Simple_repeat Simple_repeat 1 179 0 2 1451 210 316 35 0 chr13 113515343 113515514 -6768798 + (CA)n Simple_repeat Simple_repeat 1 177 0 2 1451 327 330 13 11 chr13 113516017 113516173 -6768139 - MER5C1 DNA MER1_type -98 165 9 3 1451 191 374 33 11 chr13 113516509 113516601 -6767711 + L3b LINE CR1 303 396 -86 3 1451 452 295 32 6 chr13 113517063 113517220 -6767092 - Charlie1 DNA MER1_type -15 2766 2606 3 1451 2223 274 126 22 chr13 113517313 113518219 -6766093 - Charlie1 DNA MER1_type -149 2632 1633 3 1451 319 200 40 67 chr13 113518245 113518320 -6765992 - ID4 SINE ID -9 74 2 3 1451 25 0 0 0 chr13 113518814 113518839 -6765473 + AT_rich Low_complexity Low_complexity 1 25 0 3 1451 1272 41 0 0 chr13 113518971 113519118 -6765194 + B1_Mus2 SINE Alu 1 147 0 3 1451 195 125 0 0 chr13 113519120 113519160 -6765152 + (A)n Simple_repeat Simple_repeat 1 40 0 3 1451 739 258 113 0 chr13 113521232 113521426 -6762886 + ID_B1 SINE B4 5 220 -4 3 1451 25 0 0 0 chr13 113521534 113521559 -6762753 + AT_rich Low_complexity Low_complexity 1 25 0 3 1451 350 185 0 65 chr13 113522548 113522651 -6761661 - B1_Mur3 SINE Alu 0 149 52 3 1451 242 286 0 0 chr13 113522628 113522684 -6761628 + ID_B1 SINE B4 169 224 0 4 1451 198 0 0 0 chr13 113523259 113523281 -6761031 + (A)n Simple_repeat Simple_repeat 1 22 0 4 1451 775 279 143 43 chr13 113525231 113525553 -6758759 - ORR1E LTR MaLR -5 354 1 4 1451 287 310 0 0 chr13 113526597 113526668 -6757644 + ID2 SINE ID 2 72 -11 4 1451 244 319 28 0 chr13 113526740 113526812 -6757500 - L2b LINE L2 -24 3351 3278 4 1451 225 329 27 0 chr13 113527344 113527417 -6756895 - Arthur1C DNA Tip100 -1 362 288 4 1451 433 282 28 16 chr13 113527742 113527885 -6756427 - PB1D7 SINE Alu 0 149 3 4 1451 21 0 0 0 chr13 113528948 113528969 -6755343 + AT_rich Low_complexity Low_complexity 1 21 0 4 1451 446 226 224 9 chr13 113529026 113529142 -6755170 + B1_Mur1 SINE Alu 2 142 -7 4 1451 760 203 0 14 chr13 113529150 113529290 -6755022 + RSINE1 SINE B4 3 140 -25 4 1451 702 44 0 0 chr13 113529301 113529391 -6754921 + (CA)n Simple_repeat Simple_repeat 2 91 0 5 1451 213 39 0 0 chr13 113529446 113529472 -6754840 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 5 1451 312 261 273 0 chr13 113529546 113529634 -6754678 + PB1D7 SINE Alu 1 112 -8 5 1451 292 282 159 41 chr13 113530167 113530337 -6753975 - MLT2D LTR ERVL -224 190 1 5 1451 186 268 81 40 chr13 113530724 113530798 -6753514 - L4 LINE RTE -1581 448 372 5 1451 1291 80 6 17 chr13 113530804 113530982 -6753330 - B2_Mm2 SINE B2 -18 177 2 5 1451 822 259 72 0 chr13 113531217 113531410 -6752902 - B3 SINE B2 -9 207 1 5 1451 663 286 45 0 chr13 113531681 113531835 -6752477 + ID_B1 SINE B4 1 161 -63 5 1451 330 327 47 0 chr13 113531761 113531868 -6752444 + PB1D10 SINE Alu 6 117 0 5 1451 774 163 35 8 chr13 113531877 113532060 -6752252 + L1M5 LINE L1 3055 3265 -2881 5 1451 246 300 170 94 chr13 113532738 113533003 -6751309 + B4A SINE B4 2 286 -6 6 1451 258 32 0 0 chr13 113533409 113533440 -6750872 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 1451 230 300 0 0 chr13 113533664 113533714 -6750598 - MamGypLTR2c LTR Gypsy -1005 63 14 6 1451 502 214 134 8 chr13 113533889 113534016 -6750296 + B1F SINE Alu 2 144 -5 6 1451 750 193 18 32 chr13 113535337 113535488 -6748824 - ID_B1 SINE B4 -65 227 83 6 1451 379 273 10 0 chr13 113535540 113535639 -6748673 + RSINE1 SINE B4 2 101 -64 6 1451 303 28 0 0 chr13 113535661 113535697 -6748615 + (CAGA)n Simple_repeat Simple_repeat 3 38 0 6 1451 288 0 0 0 chr13 113535710 113535742 -6748570 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1451 405 213 6 11 chr13 113536402 113536578 -6747734 + (TG)n Simple_repeat Simple_repeat 2 176 0 6 1451 360 0 0 0 chr13 113536579 113536619 -6747693 + (GA)n Simple_repeat Simple_repeat 2 41 0 6 1451 452 294 18 0 chr13 113536999 113537108 -6747204 + RSINE1 SINE B4 1 111 -54 7 1451 285 230 57 11 chr13 113537508 113537596 -6746716 - MER117 DNA MER1_type -105 92 1 7 1451 323 287 50 0 chr13 113537746 113537847 -6746465 + PB1D7 SINE Alu 2 107 -13 7 1451 207 0 0 0 chr13 113538021 113538044 -6746268 + (TG)n Simple_repeat Simple_repeat 2 24 0 7 1451 253 259 0 0 chr13 113538050 113538108 -6746204 - RMER15 LTR ERVL -117 458 401 7 1451 415 280 92 81 chr13 113538707 113538991 -6745321 + RMER10A LTR ERVL 12 298 -144 7 1451 386 210 58 29 chr13 113539087 113539190 -6745122 + RMER10A LTR ERVL 318 423 -19 7 1451 416 278 18 9 chr13 113539196 113539305 -6745007 - RSINE1 SINE B4 -34 131 22 7 1451 1200 48 0 7 chr13 113539360 113539506 -6744806 - B1_Mus2 SINE Alu -1 146 2 7 1451 469 222 0 64 chr13 113539945 113540070 -6744242 + PB1D10 SINE Alu 1 117 0 7 1451 1290 248 36 84 chr13 113540106 113540498 -6743814 - MTE2a LTR MaLR 0 379 7 7 1451 367 264 41 35 chr13 113540637 113540782 -6743530 + ID_B1 SINE B4 79 224 0 8 1451 678 150 109 36 chr13 113540929 113541067 -6743245 + B1_Mur2 SINE Alu 1 148 -1 8 1451 1031 250 132 11 chr13 113541320 113541668 -6742644 - MLT1B LTR MaLR 0 390 1 8 1451 348 303 22 29 chr13 113542229 113542365 -6741947 + GA-rich Low_complexity Low_complexity 2 136 0 8 1451 192 40 0 0 chr13 113542519 113542544 -6741768 + (A)n Simple_repeat Simple_repeat 1 25 0 8 1451 300 53 0 0 chr13 113542741 113542779 -6741533 + (CCCCCA)n Simple_repeat Simple_repeat 4 41 0 8 1451 540 0 0 0 chr13 113543304 113543364 -6740948 + (TC)n Simple_repeat Simple_repeat 1 60 0 8 1451 673 280 15 15 chr13 113543466 113543669 -6740643 - ID_B1 SINE B4 -19 205 3 8 1451 220 326 96 22 chr13 113544440 113544575 -6739737 + ID_B1 SINE B4 32 176 -48 8 1451 321 228 58 107 chr13 113544504 113544607 -6739705 + PB1D7 SINE Alu 23 120 0 8 1451 314 80 0 20 chr13 113544646 113544697 -6739615 + (CAA)n Simple_repeat Simple_repeat 2 51 0 9 1451 530 198 6 0 chr13 113544759 113544921 -6739391 + (TG)n Simple_repeat Simple_repeat 2 164 0 9 1451 447 68 0 0 chr13 113545526 113545585 -6738727 + (TG)n Simple_repeat Simple_repeat 1 59 0 9 1451 405 0 0 0 chr13 113546328 113546373 -6737939 + (TG)n Simple_repeat Simple_repeat 2 46 0 9 1451 1073 306 3 7 chr13 113546380 113546673 -6737639 - B4A SINE B4 0 292 1 9 1451 254 287 96 29 chr13 113546733 113546837 -6737475 + PB1D9 SINE Alu 1 111 -9 9 1451 323 296 0 0 chr13 113546832 113546903 -6737409 + B4A SINE B4 222 292 0 9 1451 254 240 0 0 chr13 113546903 113546953 -6737359 + (CA)n Simple_repeat Simple_repeat 1 50 0 9 1451 255 317 99 0 chr13 113547065 113547166 -6737146 + ORR1E LTR MaLR 1 111 -248 9 1451 317 277 115 47 chr13 113548526 113548674 -6735638 - LTR88c LTR Genie? -702 160 3 9 1451 1791 267 42 13 chr13 113548898 113549440 -6734872 + L1MB7 LINE L1 5508 6065 -119 1 1451 315 0 0 0 chr13 113549481 113549516 -6734796 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1 1451 505 260 10 0 chr13 113549718 113549822 -6734490 + ID_B1 SINE B4 115 219 -5 1 1451 376 188 31 0 chr13 113550050 113550114 -6734198 + ID SINE ID 4 69 -155 1 1451 186 71 0 0 chr13 113550268 113550296 -6734016 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1 1451 525 32 0 0 chr13 113550756 113550819 -6733493 + (TC)n Simple_repeat Simple_repeat 2 64 0 1 1451 225 91 0 98 chr13 113551413 113551474 -6732838 + C-rich Low_complexity Low_complexity 5 59 0 1 1451 276 342 35 26 chr13 113551615 113551729 -6732583 - PB1D7 SINE Alu -2 147 33 1 1451 240 282 14 0 chr13 113551757 113551828 -6732484 + ID4 SINE ID 5 76 -7 1 1451 323 277 24 12 chr13 113551896 113551980 -6732332 + Zaphod DNA Tip100 3947 4031 0 1 1451 450 0 0 0 chr13 113551987 113552037 -6732275 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1451 342 349 28 0 chr13 113552081 113552187 -6732125 + PB1D7 SINE Alu 2 110 -10 1 1451 781 120 113 0 chr13 113552299 113552432 -6731880 - B1_Mur4 SINE Alu 0 150 3 1 1451 497 301 50 60 chr13 113552665 113552983 -6731329 - L1ME4a LINE L1 -245 5879 5565 1 1451 210 246 13 76 chr13 113553043 113553122 -6731190 + MIR SINE MIR 27 100 -108 1 1451 399 281 71 7 chr13 113553395 113553549 -6730763 - MER5A1 DNA MER1_type -2 164 1 1 1451 408 351 46 73 chr13 113556395 113556656 -6727656 - B4 SINE B4 -4 288 35 1 1451 489 66 13 26 chr13 113556738 113556816 -6727496 - B2_Mm2 SINE B2 -118 77 1 1 1451 603 226 15 0 chr13 113557031 113557164 -6727148 + B1F2 SINE Alu 14 148 -1 1 1451 214 50 0 48 chr13 113557261 113557303 -6727009 + (TTAA)n Simple_repeat Simple_repeat 2 41 0 1 1451 380 179 12 3 chr13 113557437 113557520 -6726792 - PB1 SINE Alu -30 97 23 1 1451 235 350 78 24 chr13 113558054 113558259 -6726053 + LTR50 LTR ERVL 463 678 -117 1 1451 771 296 67 95 chr13 113558697 113558931 -6725381 - L1MC2 LINE L1 -8 6336 6100 1 1451 300 361 20 27 chr13 113558931 113559079 -6725233 - RSINE1 SINE B4 -15 150 4 1 1451 771 296 67 95 chr13 113559079 113559336 -6724976 - L1MC2 LINE L1 -245 6099 5852 1 1451 324 263 0 0 chr13 113559336 113559412 -6724900 + ID4 SINE ID 5 80 -3 1 1451 771 296 67 95 chr13 113559412 113559633 -6724679 - L1MC2 LINE L1 -493 5851 5643 1 1451 292 271 0 28 chr13 113559637 113559709 -6724603 + ID4_ SINE ID 7 76 -7 1 1451 335 188 31 0 chr13 113559717 113559781 -6724531 - L1MC2 LINE L1 -674 5659 5594 1 1451 994 232 144 16 chr13 113559786 113560105 -6724207 + ORR1D1 LTR MaLR 1 360 -14 1 1451 950 216 70 0 chr13 113560172 113560371 -6723941 + ID_B1 SINE B4 12 224 0 1 1451 232 185 18 36 chr13 113560432 113560488 -6723824 + (TATG)n Simple_repeat Simple_repeat 3 57 0 1 1451 571 212 25 25 chr13 113560519 113560640 -6723672 + B1_Mur2 SINE Alu 19 139 -10 1 1451 291 277 15 0 chr13 113561505 113561570 -6722742 + ID4 SINE ID 6 71 -12 1 1451 603 0 0 0 chr13 113561570 113561637 -6722675 + (GA)n Simple_repeat Simple_repeat 2 68 0 1 1451 234 0 0 0 chr13 113561851 113561877 -6722435 + (A)n Simple_repeat Simple_repeat 1 26 0 1 1451 198 103 0 0 chr13 113562004 113562033 -6722279 + (T)n Simple_repeat Simple_repeat 1 29 0 1 1451 327 104 0 0 chr13 113563020 113563068 -6721244 + (TTTG)n Simple_repeat Simple_repeat 1 48 0 1 1451 470 242 0 21 chr13 113564701 113564798 -6719514 + ID_B1 SINE B4 126 220 -4 1 1451 327 302 0 128 chr13 113564856 113564989 -6719323 - PB1D10 SINE Alu 0 117 2 1 1451 254 185 204 0 chr13 113565027 113565081 -6719231 + ID4 SINE ID 2 66 -17 1 1451 281 289 26 0 chr13 113565130 113565206 -6719106 + ID4_ SINE ID 1 78 -5 1 1451 447 246 36 36 chr13 113565294 113565433 -6718879 + B1F SINE Alu 10 148 -1 1 1451 23 33 0 0 chr13 113565509 113565539 -6718773 + AT_rich Low_complexity Low_complexity 1 30 0 1 1451 1036 63 7 0 chr13 113565919 113566062 -6718250 + B1_Mm SINE Alu 4 147 0 1 1451 578 242 23 0 chr13 113566711 113566839 -6717473 + B1F SINE Alu 3 133 -16 1 1451 317 197 0 13 chr13 113566847 113566924 -6717388 + GA-rich Low_complexity Low_complexity 1 76 0 1 1451 214 299 59 15 chr13 113567210 113567278 -6717034 - ID4 SINE ID -12 71 1 1 1451 229 302 23 23 chr13 113567698 113567827 -6716485 + L1M5 LINE L1 5715 5843 -330 1 1451 399 291 0 41 chr13 113567966 113568088 -6716224 + PB1D10 SINE Alu 1 117 0 1 1451 431 252 10 0 chr13 113568253 113568356 -6715956 + B1_Mur2 SINE Alu 2 105 -44 1 1451 568 186 17 8 chr13 113569417 113569557 -6714755 + B1_Mus2 SINE Alu 1 148 0 1 1451 909 298 74 52 chr13 113570008 113570429 -6713883 + MLT1D LTR MaLR 68 497 -8 1 1451 2420 187 82 35 chr13 113570578 113571003 -6713309 + Lx9 LINE L1 7035 7478 -166 1 1451 1121 37 4 48 chr13 113571003 113571234 -6713078 + (CA)n Simple_repeat Simple_repeat 1 220 0 1 1451 2420 187 82 35 chr13 113571234 113571382 -6712930 + Lx9 LINE L1 7479 7634 -10 1 1451 443 33 16 0 chr13 113571771 113571832 -6712480 + (TTTA)n Simple_repeat Simple_repeat 1 62 0 1 1451 1183 57 0 0 chr13 113571834 113571975 -6712337 - B1_Mus2 SINE Alu -6 141 1 1 1451 466 228 108 81 chr13 113571994 113572180 -6712132 - B3A SINE B2 -6 192 2 1 1451 1214 143 113 5 chr13 113572270 113572474 -6711838 + URR1A DNA MER1_type 1 226 0 1 1451 391 279 62 39 chr13 113572489 113572668 -6711644 - MLT1D LTR MaLR -289 216 34 1 1451 446 286 95 70 chr13 113573019 113573260 -6711052 - B4 SINE B4 -42 250 4 1 1451 648 161 140 48 chr13 113573296 113573470 -6710842 + B3 SINE B2 1 181 -14 1 1451 3657 63 0 0 chr13 113573470 113573917 -6710395 - L1_Mus1 LINE L1 -21 5862 5416 1 1451 5573 69 6 7 chr13 113573917 113574643 -6709669 + L1_Mus1 LINE L1 5843 6567 0 1 1451 239 294 203 14 chr13 113574978 113575050 -6709262 + RSINE1 SINE B4 2 98 -67 1 1451 459 0 0 0 chr13 113575050 113575101 -6709211 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1451 239 294 203 14 chr13 113575101 113575166 -6709146 + RSINE1 SINE B4 99 165 0 1 1451 200 100 25 0 chr13 113575403 113575443 -6708869 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 1 1451 370 178 13 40 chr13 113575791 113575867 -6708445 + ID4_ SINE ID 3 76 -7 1 1451 514 282 35 12 chr13 113576431 113576603 -6707709 - L1M2 LINE L1 -549 5742 5567 1 1451 641 66 0 11 chr13 113576943 113577035 -6707277 + (TTTC)n Simple_repeat Simple_repeat 2 92 0 1 1451 574 274 22 0 chr13 113577050 113577185 -6707127 + B1F2 SINE Alu 1 138 -11 1 1451 306 0 0 0 chr13 113577385 113577419 -6706893 + (T)n Simple_repeat Simple_repeat 1 34 0 1 1451 670 318 43 18 chr13 113577420 113577747 -6706565 - L1MA7 LINE L1 -452 5839 5505 1 1451 346 225 18 26 chr13 113578419 113578533 -6705779 - MER5A1 DNA MER1_type -3 163 51 1 1451 236 322 22 0 chr13 113578665 113578755 -6705557 - Charlie4z DNA MER1_type -23 144 53 1 1451 526 126 0 0 chr13 113579313 113579390 -6704922 + B1_Mus2 SINE Alu 61 137 -10 1 1451 231 61 0 0 chr13 113579390 113579423 -6704889 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 1 1451 220 118 38 38 chr13 113579756 113579835 -6704477 + (TATG)n Simple_repeat Simple_repeat 2 80 0 1 1451 26 0 0 0 chr13 113579857 113579883 -6704429 + AT_rich Low_complexity Low_complexity 1 26 0 1 1451 213 303 101 43 chr13 113580356 113580494 -6703818 + L3 LINE CR1 3131 3276 -1213 1 1451 336 48 0 0 chr13 113580717 113580759 -6703553 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 1 1451 229 247 53 11 chr13 113581644 113581738 -6702574 + L1MA6 LINE L1 5332 5429 -695 1 1451 521 55 14 0 chr13 113581924 113581997 -6702315 + (GGGA)n Simple_repeat Simple_repeat 1 74 0 1 1451 309 269 127 30 chr13 113582062 113582196 -6702116 + B1F SINE Alu 3 149 0 1 1451 288 0 0 0 chr13 113582276 113582308 -6702004 + (TG)n Simple_repeat Simple_repeat 2 33 0 1 1451 501 233 132 0 chr13 113582387 113582516 -6701796 - B1_Mur3 SINE Alu -2 147 2 1 1451 1153 304 126 28 chr13 113582597 113583210 -6701102 - Lx8 LINE L1 -86 7387 6715 1 1451 1074 106 0 0 chr13 113583219 113583574 -6700738 + (TG)n Simple_repeat Simple_repeat 1 355 0 1 1451 816 239 0 18 chr13 113583589 113583755 -6700557 - B3 SINE B2 -48 168 6 1 1451 220 250 0 18 chr13 113583952 113584009 -6700303 + PB1D7 SINE Alu 1 56 -64 1 1451 852 121 0 0 chr13 113584470 113584602 -6699710 + (TTTC)n Simple_repeat Simple_repeat 1 132 0 1 1451 706 53 0 0 chr13 113584602 113584696 -6699616 - B1_Mus2 SINE Alu -12 135 42 1 1451 230 317 19 37 chr13 113584787 113584895 -6699417 + MTEa LTR MaLR 274 379 0 1 1451 216 0 0 0 chr13 113584934 113584958 -6699354 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1 1451 752 144 88 29 chr13 113585390 113585526 -6698786 - B1F2 SINE Alu -5 144 1 1 1451 1224 272 120 49 chr13 113585913 113586488 -6697824 + L1MA6 LINE L1 5449 6064 -236 1 1451 422 327 31 49 chr13 113586492 113586717 -6697595 + L1MB8 LINE L1 5934 6154 -24 1 1451 590 248 20 7 chr13 113586771 113586917 -6697395 - RSINE1 SINE B4 -13 152 5 1 1451 405 245 39 7 chr13 113587038 113587154 -6697158 - B1F SINE Alu -14 133 20 1 1451 198 103 0 0 chr13 113587161 113587190 -6697122 + (TCC)n Simple_repeat Simple_repeat 2 30 0 1 1451 180 0 0 0 chr13 113587291 113587311 -6697001 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1 1451 559 271 36 21 chr13 113587347 113587539 -6696773 - B4A SINE B4 0 292 98 1 1451 189 0 0 0 chr13 113587550 113587571 -6696741 + (TC)n Simple_repeat Simple_repeat 2 22 0 1 1451 504 48 0 0 chr13 113587571 113587633 -6696679 + (TTTTG)n Simple_repeat Simple_repeat 2 64 0 1 1451 782 167 0 35 chr13 113587633 113587776 -6696536 - B1_Mus1 SINE Alu -10 138 1 1 1451 662 256 8 113 chr13 113587776 113587874 -6696438 - B4A SINE B4 -218 74 2 2 1451 184 0 62 31 chr13 113588332 113588364 -6695948 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 2 1451 1016 59 59 0 chr13 113588367 113588503 -6695809 - B1_Mm SINE Alu -2 145 2 2 1451 1748 182 81 3 chr13 113588531 113588900 -6695412 + MTD LTR MaLR 20 417 -2 2 1451 214 182 23 0 chr13 113589072 113589116 -6695196 + MIRm SINE MIR 219 263 -13 2 1451 2920 78 15 10 chr13 113589148 113589549 -6694763 + RLTR9D LTR ERVK 1 403 0 2 1451 419 0 0 19 chr13 113589601 113589653 -6694659 + (TAA)n Simple_repeat Simple_repeat 2 52 0 2 1451 481 200 113 23 chr13 113589922 113590055 -6694257 + ID_B1 SINE B4 80 224 0 2 1451 213 269 54 71 chr13 113590118 113590230 -6694082 - MIRc SINE MIR -39 229 120 2 1451 284 287 190 36 chr13 113590495 113590748 -6693564 - MER31B LTR ERV1 -163 303 12 2 1451 225 0 0 0 chr13 113591887 113591912 -6692400 + (CAGG)n Simple_repeat Simple_repeat 1 25 0 2 1451 192 40 0 0 chr13 113592268 113592293 -6692019 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 2 1451 204 125 0 0 chr13 113592384 113592416 -6691896 + (T)n Simple_repeat Simple_repeat 1 32 0 2 1451 833 129 7 0 chr13 113592736 113592875 -6691437 + (TTTC)n Simple_repeat Simple_repeat 1 140 0 2 1451 1194 43 0 0 chr13 113592875 113593016 -6691296 - B1_Mm SINE Alu -6 141 1 2 1451 189 0 0 0 chr13 113593081 113593102 -6691210 + (C)n Simple_repeat Simple_repeat 1 21 0 2 1451 289 275 66 0 chr13 113593159 113593250 -6691062 + PB1D10 SINE Alu 5 101 -16 2 1451 285 271 29 0 chr13 113593333 113593403 -6690909 + CT-rich Low_complexity Low_complexity 1 72 0 2 1451 265 262 86 19 chr13 113593403 113593508 -6690804 - PB1D10 SINE Alu -5 112 1 2 1451 21 0 0 0 chr13 113593640 113593661 -6690651 + AT_rich Low_complexity Low_complexity 1 21 0 2 1451 650 228 28 0 chr13 113593685 113593830 -6690482 - Lx6 LINE L1 -77 7383 7235 2 1451 364 296 28 0 chr13 113593847 113593955 -6690357 + B1F SINE Alu 2 112 -37 2 1451 531 222 102 15 chr13 113594190 113594327 -6689985 - B1F SINE Alu 0 149 1 2 1451 393 243 95 4 chr13 113594487 113594595 -6689717 - B3 SINE B2 -76 119 6 2 1451 278 106 0 21 chr13 113594626 113594674 -6689638 + (TTG)n Simple_repeat Simple_repeat 2 48 0 2 1451 559 228 141 8 chr13 113595509 113595637 -6688675 - B1_Mur1 SINE Alu -2 147 3 2 1451 357 181 160 9 chr13 113595893 113595999 -6688313 - L2c LINE L2 -46 3341 3220 2 1451 262 404 25 6 chr13 113596299 113596456 -6687856 + LTR33 LTR ERVL 336 495 -20 2 1451 216 0 0 0 chr13 113596649 113596673 -6687639 + (TG)n Simple_repeat Simple_repeat 1 24 0 2 1451 279 0 0 0 chr13 113596673 113596703 -6687609 + (GA)n Simple_repeat Simple_repeat 1 31 0 2 1451 615 213 96 45 chr13 113596719 113596876 -6687436 - B3 SINE B2 -46 170 6 2 1451 261 0 0 0 chr13 113597139 113597168 -6687144 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 2 1451 21 0 0 0 chr13 113597607 113597628 -6686684 + AT_rich Low_complexity Low_complexity 1 21 0 2 1451 261 296 0 43 chr13 113597923 113598015 -6686297 - RSINE1 SINE B4 -29 136 49 2 1451 195 129 0 0 chr13 113598196 113598227 -6686085 + (A)n Simple_repeat Simple_repeat 1 31 0 2 1451 494 264 40 30 chr13 113598246 113598445 -6685867 - ID_B1 SINE B4 -23 201 1 2 1451 419 263 0 0 chr13 113599247 113599342 -6684970 - ID_B1 SINE B4 -1 223 129 2 1451 292 194 16 0 chr13 113599569 113599631 -6684681 - PB1D10 SINE Alu -27 90 28 2 1451 252 0 0 0 chr13 113601911 113601939 -6682373 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2 1451 259 256 197 27 chr13 113601970 113602128 -6682184 + MIRc SINE MIR 39 220 -48 2 1451 405 0 0 0 chr13 113602348 113602393 -6681919 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1451 226 214 0 0 chr13 113602393 113602435 -6681877 + GA-rich Low_complexity Low_complexity 4 45 0 2 1451 688 184 19 58 chr13 113602537 113602693 -6681619 + B1_Mur4 SINE Alu 1 150 0 2 1451 23 33 0 0 chr13 113602693 113602723 -6681589 + AT_rich Low_complexity Low_complexity 1 30 0 2 1451 893 35 0 9 chr13 113602815 113602929 -6681383 + (TTTCC)n Simple_repeat Simple_repeat 1 113 0 2 1451 441 147 10 21 chr13 113602929 113603026 -6681286 + C-rich Low_complexity Low_complexity 3 98 0 2 1451 948 127 0 0 chr13 113603026 113603191 -6681121 + (TTCTC)n Simple_repeat Simple_repeat 4 168 0 2 1451 246 268 18 0 chr13 113603191 113603247 -6681065 - ID_B1 SINE B4 -9 215 159 2 1451 387 0 0 0 chr13 113604458 113604501 -6679811 + (TG)n Simple_repeat Simple_repeat 1 43 0 2 1451 215 256 36 24 chr13 113605462 113605546 -6678766 + PB1 SINE Alu 43 127 0 2 1451 263 326 45 0 chr13 113606007 113606096 -6678216 - L2b LINE L2 0 3375 3283 2 1451 1072 58 218 6 chr13 113606511 113606667 -6677645 + B2_Mm2 SINE B2 2 190 -5 2 1451 711 173 98 0 chr13 113606670 113606803 -6677509 + B1_Mur4 SINE Alu 2 147 -3 2 1451 200 184 20 0 chr13 113606818 113606867 -6677445 + GA-rich Low_complexity Low_complexity 3 52 0 2 1451 479 139 0 0 chr13 113606886 113606958 -6677354 + BC1_Mm scRNA scRNA 2 73 -79 2 1451 253 226 19 0 chr13 113606984 113607037 -6677275 + (CA)n Simple_repeat Simple_repeat 2 55 0 2 1451 272 254 63 0 chr13 113607163 113607226 -6677086 - PB1D10 SINE Alu -8 109 43 2 1451 475 279 48 67 chr13 113607271 113607436 -6676876 - RSINE1 SINE B4 -1 164 3 2 1451 443 282 26 0 chr13 113607764 113607881 -6676431 + PB1D9 SINE Alu 1 120 0 2 1451 216 0 0 0 chr13 113608357 113608381 -6675931 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1451 421 254 36 0 chr13 113609357 113609467 -6674845 + PB1D7 SINE Alu 1 114 -6 2 1451 354 321 66 0 chr13 113609955 113610092 -6674220 - B1F2 SINE Alu -3 146 1 2 1451 1071 108 0 0 chr13 113610266 113610479 -6673833 + (TG)n Simple_repeat Simple_repeat 1 213 0 2 1451 512 257 121 0 chr13 113610481 113610621 -6673691 - B3 SINE B2 -57 159 3 2 1451 842 212 58 34 chr13 113610660 113610865 -6673447 + B3 SINE B2 1 210 -6 2 1451 409 301 95 29 chr13 113610928 113611065 -6673247 - RSINE1 SINE B4 -15 150 5 2 1451 789 242 56 0 chr13 113611092 113611290 -6673022 - B3 SINE B2 -2 214 6 2 1451 629 260 17 11 chr13 113611347 113611526 -6672786 - B3A SINE B2 -15 183 4 2 1451 342 0 0 0 chr13 113611559 113611597 -6672715 + (TCCCC)n Simple_repeat Simple_repeat 3 40 0 2 1451 591 243 34 14 chr13 113611692 113611838 -6672474 - B1F1 SINE Alu 0 149 1 2 1451 1367 69 0 31 chr13 113611933 113612127 -6672185 - L1_Mus2 LINE L1 0 6566 6379 2 1451 1586 169 32 12 chr13 113612787 113613221 -6671091 + RMER17C LTR ERVK 16 438 -520 2 1451 22 0 0 0 chr13 113613466 113613488 -6670824 + AT_rich Low_complexity Low_complexity 1 22 0 2 1451 330 45 0 0 chr13 113613488 113613532 -6670780 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1451 365 297 54 15 chr13 113613532 113613662 -6670650 - B3A SINE B2 -44 154 20 2 1451 238 274 127 36 chr13 113613760 113613870 -6670442 - L1ME1 LINE L1 -150 6029 5910 2 1451 432 0 0 0 chr13 113613873 113613921 -6670391 + (TG)n Simple_repeat Simple_repeat 2 49 0 2 1451 460 0 33 0 chr13 113614243 113614303 -6670009 + (GA)n Simple_repeat Simple_repeat 1 62 0 2 1451 849 47 0 0 chr13 113614454 113614560 -6669752 + (CA)n Simple_repeat Simple_repeat 2 107 0 2 1451 234 213 16 0 chr13 113614808 113614869 -6669443 + (CAAA)n Simple_repeat Simple_repeat 2 63 0 2 1451 658 227 28 28 chr13 113615213 113615358 -6668954 + RSINE1 SINE B4 4 148 -17 2 1451 200 97 0 31 chr13 113615541 113615573 -6668739 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2 1451 294 271 0 0 chr13 113616304 113616455 -6667857 + (CATATA)n Simple_repeat Simple_repeat 3 153 0 2 1451 207 0 0 0 chr13 113616619 113616642 -6667670 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1451 291 240 142 0 chr13 113616642 113616735 -6667577 - B1F SINE Alu -11 109 1 2 1451 257 219 40 50 chr13 113616850 113616951 -6667361 - Charlie5 DNA MER1_type -2499 125 26 2 1451 3081 66 2 15 chr13 113617082 113617482 -6666830 + MTA_Mm LTR MaLR 2 396 0 2 1451 848 200 79 10 chr13 113617824 113618026 -6666286 + URR1A DNA MER1_type 11 226 0 2 1451 707 215 114 32 chr13 113618413 113618630 -6665682 + Lx3C LINE L1 6764 6974 -2 2 1451 1044 161 43 5 chr13 113619052 113619239 -6665073 + B3 SINE B2 5 198 -18 2 1451 324 238 103 44 chr13 113621073 113621209 -6663103 - B1F SINE Alu -5 144 1 2 1451 351 167 0 0 chr13 113621421 113621481 -6662831 + B3 SINE B2 151 210 -6 2 1451 224 77 0 25 chr13 113621501 113621541 -6662771 + (TA)n Simple_repeat Simple_repeat 2 40 0 2 1451 609 194 43 43 chr13 113621685 113621825 -6662487 - B1_Mur1 SINE Alu -8 141 2 2 1451 348 265 38 29 chr13 113621836 113621941 -6662371 - PB1D10 SINE Alu -7 110 5 2 1451 218 316 0 0 chr13 113621956 113622013 -6662299 + CT-rich Low_complexity Low_complexity 3 59 0 2 1451 222 245 19 0 chr13 113624225 113624278 -6660034 + PB1 SINE Alu 1 54 -73 2 1451 393 149 0 0 chr13 113624386 113624453 -6659859 + (T)n Simple_repeat Simple_repeat 1 67 0 2 1451 1185 68 0 0 chr13 113624453 113624599 -6659713 - B1_Mus2 SINE Alu 0 147 2 2 1451 393 197 58 0 chr13 113625854 113625991 -6658321 + (TTATA)n Simple_repeat Simple_repeat 2 146 0 2 1451 279 0 0 0 chr13 113626879 113626910 -6657402 + (CA)n Simple_repeat Simple_repeat 2 32 0 3 1451 683 268 183 45 chr13 113627068 113627424 -6656888 - MTD LTR MaLR -14 405 1 3 1451 288 269 0 0 chr13 113627741 113627808 -6656504 + L1MC2 LINE L1 5131 5197 -949 3 1451 348 217 33 6 chr13 113627917 113628017 -6656295 + PB1D10 SINE Alu 21 126 -23 3 1451 695 231 24 104 chr13 113628198 113628449 -6655863 + L1MC2 LINE L1 5573 5803 -541 3 1451 755 316 93 33 chr13 113628557 113628666 -6655646 + L1MC2 LINE L1 5816 5935 -409 3 1451 396 0 0 0 chr13 113628666 113628710 -6655602 + (ATATG)n Simple_repeat Simple_repeat 1 44 0 3 1451 755 316 93 33 chr13 113628710 113629082 -6655230 + L1MC2 LINE L1 5936 6325 -19 3 1451 387 0 0 0 chr13 113629176 113629219 -6655093 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1451 630 177 35 0 chr13 113629219 113629332 -6654980 - B1_Mur2 SINE Alu -32 117 1 3 1451 465 229 113 7 chr13 113629545 113629686 -6654626 - RSINE1 SINE B4 -7 158 3 3 1451 261 0 0 0 chr13 113629996 113630025 -6654287 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1451 450 250 0 0 chr13 113630029 113630113 -6654199 + B1_Mur3 SINE Alu 1 84 -65 3 1451 1593 47 11 0 chr13 113630230 113630421 -6653891 + B2_Mm1a SINE B2 1 193 0 3 1451 738 268 122 84 chr13 113631181 113631799 -6652513 - RMER13A LTR ERVK -238 670 1 3 1451 225 276 102 28 chr13 113632334 113632442 -6651870 - L1MD LINE L1 -1797 4349 4234 3 1451 733 179 14 7 chr13 113632529 113632675 -6651637 + B1_Mus1 SINE Alu 2 148 0 3 1451 319 37 110 18 chr13 113632898 113633007 -6651305 + (TCTG)n Simple_repeat Simple_repeat 1 119 0 3 1451 231 288 27 14 chr13 113633089 113633163 -6651149 + L2 LINE L2 2584 2658 -761 3 1451 1871 134 50 50 chr13 113633496 113633857 -6650455 - ORR1C1 LTR MaLR 0 378 18 3 1451 1675 89 4 0 chr13 113633857 113634092 -6650220 - RMER19C LTR ERVK 0 611 376 3 1451 935 175 20 56 chr13 113634104 113634339 -6649973 - RMER19C LTR ERVK -292 319 27 3 1451 1118 75 0 26 chr13 113634343 113634494 -6649818 - B1_Mus1 SINE Alu 0 148 2 3 1451 633 27 0 0 chr13 113634599 113634674 -6649638 + (TTCC)n Simple_repeat Simple_repeat 4 78 0 3 1451 1524 44 27 0 chr13 113634804 113634987 -6649325 - B2_Mm1a SINE B2 -5 188 1 3 1451 2804 129 138 32 chr13 113635033 113635658 -6648654 + ORR1B1-int LTR MaLR 1273 1963 0 3 1451 1661 129 56 67 chr13 113635665 113636023 -6648289 + ORR1B1 LTR MaLR 41 394 0 3 1451 4146 136 91 39 chr13 113636452 113637361 -6646951 + RMER17B LTR ERVK 2 958 0 3 1451 198 0 0 0 chr13 113637539 113637561 -6646751 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 3 1451 815 158 26 52 chr13 113637573 113637727 -6646585 - B1_Mur4 SINE Alu 0 150 1 3 1451 787 289 67 21 chr13 113638097 113638443 -6645869 + L1MB2 LINE L1 5542 5914 -257 3 1451 1068 107 0 29 chr13 113638443 113638617 -6645695 + B2_Mm2 SINE B2 2 170 -25 3 1451 646 259 19 14 chr13 113638800 113638974 -6645338 + B3A SINE B2 1 174 -24 3 1452 21 36 0 0 chr13 113641570 113641598 -6642714 + AT_rich Low_complexity Low_complexity 1 28 0 3 1452 351 236 22 0 chr13 113642418 113642507 -6641805 - PB1 SINE Alu -8 119 29 3 1452 246 268 0 0 chr13 113642540 113642596 -6641716 + PB1D10 SINE Alu 51 106 -11 3 1452 315 0 0 0 chr13 113642598 113642633 -6641679 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1452 378 0 0 0 chr13 113642661 113642703 -6641609 + (GA)n Simple_repeat Simple_repeat 1 42 0 3 1452 232 236 83 0 chr13 113643015 113643087 -6641225 + GA-rich Low_complexity Low_complexity 4 81 0 3 1452 551 294 72 6 chr13 113643092 113643273 -6641039 + B3A SINE B2 3 195 -3 3 1452 422 313 20 26 chr13 113643411 113643545 -6640767 + RSINE1 SINE B4 4 136 -29 3 1452 1117 29 34 11 chr13 113643545 113643721 -6640591 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1452 422 313 20 26 chr13 113643721 113643737 -6640575 + RSINE1 SINE B4 137 152 -13 3 1452 1121 56 14 0 chr13 113645105 113645248 -6639064 + B1_Mus2 SINE Alu 3 147 0 3 1452 696 56 0 0 chr13 113645919 113646008 -6638304 + (GA)n Simple_repeat Simple_repeat 2 90 0 3 1452 1398 95 0 5 chr13 113646307 113646498 -6637814 - B2_Mm2 SINE B2 -4 191 2 3 1452 760 148 21 14 chr13 113648005 113648149 -6636163 + B1_Mus1 SINE Alu 4 148 0 3 1452 459 261 283 0 chr13 113648631 113648857 -6635455 - B4A SINE B4 -2 290 1 3 1452 315 340 174 3 chr13 113648926 113649248 -6635064 - L1M5 LINE L1 -1096 5050 4674 3 1452 930 224 34 10 chr13 113649346 113649553 -6634759 - B3 SINE B2 -4 212 1 3 1452 465 258 36 43 chr13 113650509 113650647 -6633665 - RSINE1 SINE B4 -28 137 1 3 1452 723 225 21 4 chr13 113651567 113651736 -6632576 + B3 SINE B2 44 211 -5 3 1452 1295 87 49 0 chr13 113651865 113652049 -6632263 + B2_Mm2 SINE B2 1 193 -2 3 1452 253 217 0 16 chr13 113653567 113653628 -6630684 - MLT1A0 LTR MaLR -235 130 71 3 1452 303 113 242 0 chr13 113654112 113654174 -6630138 + URR1B DNA MER1_type 149 225 0 3 1452 1364 72 55 0 chr13 113654997 113655178 -6629134 - B2_Mm2 SINE B2 -3 192 2 3 1452 1124 88 0 7 chr13 113655261 113655409 -6628903 + B1_Mus1 SINE Alu 2 148 0 3 1452 322 239 182 9 chr13 113655623 113655733 -6628579 - B4 SINE B4 -12 280 152 3 1452 304 243 54 0 chr13 113655754 113655828 -6628484 - B4 SINE B4 -196 96 19 3 1452 1494 167 169 6 chr13 113655830 113656185 -6628127 - MTC LTR MaLR -8 413 1 3 1452 228 247 167 0 chr13 113658745 113658835 -6625477 + L2a LINE L2 2916 3023 -403 3 1452 204 227 0 0 chr13 113658970 113659014 -6625298 + L2a LINE L2 3370 3413 -13 3 1452 463 200 175 0 chr13 113660062 113660182 -6624130 + B1_Mur1 SINE Alu 1 141 -8 3 1452 484 42 28 0 chr13 113661102 113661173 -6623139 + (TG)n Simple_repeat Simple_repeat 2 74 0 3 1452 572 264 54 7 chr13 113661310 113661459 -6622853 - B3A SINE B2 -26 172 17 3 1452 267 197 16 16 chr13 113662404 113662466 -6621846 - B4A SINE B4 -49 243 182 3 1452 242 322 114 11 chr13 113662480 113662568 -6621744 - B4A SINE B4 -189 103 7 3 1452 466 234 12 9 chr13 113662638 113662758 -6621554 - B1_Mur3 SINE Alu -27 122 1 3 1452 351 224 163 41 chr13 113663653 113663825 -6620487 + B3A SINE B2 2 194 -4 3 1452 697 271 32 46 chr13 113663911 113664128 -6620184 + B3 SINE B2 3 216 0 3 1452 1163 68 7 0 chr13 113664129 113664275 -6620037 + B1_Mus1 SINE Alu 2 148 0 3 1452 28 29 0 0 chr13 113664277 113664312 -6620000 + AT_rich Low_complexity Low_complexity 1 35 0 3 1452 390 150 0 0 chr13 113664334 113664384 -6619928 + (A)n Simple_repeat Simple_repeat 1 50 0 3 1452 1203 41 7 0 chr13 113664384 113664530 -6619782 + B1_Mm SINE Alu 1 147 0 3 1452 390 150 0 0 chr13 113664530 113664559 -6619753 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1452 229 203 288 0 chr13 113665329 113665388 -6618924 - PB1D10 SINE Alu -20 97 22 3 1452 387 0 0 0 chr13 113665625 113665668 -6618644 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1452 195 42 0 0 chr13 113667533 113667557 -6616755 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1452 1211 55 0 0 chr13 113667557 113667703 -6616609 - B1_Mus2 SINE Alu 0 147 2 3 1452 234 314 83 55 chr13 113667713 113667858 -6616454 - Looper DNA PiggyBac -660 898 750 3 1452 277 256 61 0 chr13 113668491 113668573 -6615739 - U6 snRNA snRNA -18 89 3 3 1452 1137 95 0 0 chr13 113668770 113668918 -6615394 + B1_Mus1 SINE Alu 1 148 0 3 1452 1254 41 0 0 chr13 113669474 113669621 -6614691 - B1_Mus2 SINE Alu 0 147 1 3 1452 372 297 57 14 chr13 113669912 113670052 -6614260 - MER3 DNA MER1_type -63 146 1 3 1452 191 156 0 43 chr13 113670254 113670301 -6614011 + GA-rich Low_complexity Low_complexity 2 46 0 3 1452 341 330 122 15 chr13 113670554 113670751 -6613561 - MER2 DNA MER2_type -107 238 21 3 1452 1377 19 0 0 chr13 113671776 113671938 -6612374 + B2_Mm1t SINE B2 2 163 -30 3 1452 218 0 0 86 chr13 113671938 113671973 -6612339 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 3 1452 1199 54 0 0 chr13 113672552 113672700 -6611612 + B1_Mus1 SINE Alu 1 148 0 3 1452 279 330 18 9 chr13 113673029 113673139 -6611173 + B3 SINE B2 57 167 -49 3 1452 972 70 0 0 chr13 113673140 113673269 -6611043 + (CA)n Simple_repeat Simple_repeat 1 129 0 3 1452 255 311 92 64 chr13 113673634 113673775 -6610537 - B1F SINE Alu -1 148 4 3 1452 288 0 0 0 chr13 113675567 113675599 -6608713 + (TAA)n Simple_repeat Simple_repeat 1 32 0 3 1452 576 167 288 6 chr13 113676489 113676652 -6607660 + B3 SINE B2 2 210 -6 3 1452 371 263 11 0 chr13 113678409 113678504 -6605808 - Lx7 LINE L1 -395 7301 7206 3 1452 246 333 93 10 chr13 113678505 113678602 -6605710 - B1F SINE Alu -44 105 1 3 1452 1142 21 42 0 chr13 113678770 113678913 -6605399 - ORR1A0 LTR MaLR 0 346 198 3 1452 1508 42 21 0 chr13 113678941 113679130 -6605182 + B2_Mm2 SINE B2 1 193 -2 3 1452 389 335 12 18 chr13 113679581 113679745 -6604567 + RSINE1 SINE B4 3 165 0 3 1452 237 318 15 52 chr13 113680195 113680331 -6603981 + L1M4b LINE L1 142 272 -7062 3 1452 183 235 86 29 chr13 113681887 113681957 -6602355 - L3 LINE CR1 -169 4320 4247 3 1452 22 0 0 0 chr13 113682832 113682854 -6601458 + AT_rich Low_complexity Low_complexity 1 22 0 3 1452 230 260 185 14 chr13 113683023 113683234 -6601078 - L1M4 LINE L1 -818 5328 5082 3 1452 205 195 0 24 chr13 113683304 113683346 -6600966 + CT-rich Low_complexity Low_complexity 3 43 0 3 1452 648 131 73 0 chr13 113683355 113683475 -6600837 - B1_Mus2 SINE Alu -9 139 5 3 1452 235 330 100 36 chr13 113683846 113683956 -6600356 + B3A SINE B2 2 118 -80 3 1452 539 329 7 52 chr13 113684025 113684179 -6600133 + RSINE1 SINE B4 3 149 -16 3 1452 471 298 56 6 chr13 113684266 113684428 -6599884 + B4A SINE B4 119 288 -4 3 1452 496 263 80 172 chr13 113684847 113684912 -6599400 - B4A SINE B4 -6 286 228 4 1452 1279 69 28 28 chr13 113684912 113685091 -6599221 - B2_Mm2 SINE B2 -13 182 4 4 1452 496 263 80 172 chr13 113685091 113685338 -6598974 - B4A SINE B4 -65 227 3 4 1452 752 162 73 0 chr13 113686010 113686146 -6598166 + B1_Mus1 SINE Alu 3 148 0 4 1452 323 357 33 65 chr13 113687742 113687758 -6596554 + B1F1 SINE Alu 2 58 -91 4 1452 374 291 17 43 chr13 113687758 113687873 -6596439 + ID_B1 SINE B4 97 208 -16 4 1452 323 357 33 65 chr13 113687873 113687895 -6596417 + B1F1 SINE Alu 59 149 0 4 1452 391 253 0 52 chr13 113687945 113688041 -6596271 + RSINE1 SINE B4 15 105 -60 4 1452 1245 136 50 143 chr13 113688477 113688534 -6595778 + RLTR15 LTR ERVK 6 47 -312 4 1452 1243 34 7 0 chr13 113688534 113688681 -6595631 + B1_Mus1 SINE Alu 1 148 0 4 1452 1245 136 50 143 chr13 113688681 113688924 -6595388 + RLTR15 LTR ERVK 48 278 -81 4 1452 1202 55 7 0 chr13 113689225 113689371 -6594941 + B1_Mm SINE Alu 1 147 0 4 1452 1065 146 125 5 chr13 113690446 113690646 -6593666 - URR1B DNA MER1_type -1 224 1 4 1452 407 213 124 124 chr13 113691255 113691448 -6592864 - B3 SINE B2 -17 199 7 4 1452 1472 45 17 0 chr13 113692259 113692437 -6591875 + B2_Mm2 SINE B2 1 181 -14 4 1452 226 275 72 18 chr13 113693269 113693380 -6590932 + PB1D7 SINE Alu 1 117 -3 4 1452 29 0 0 0 chr13 113693924 113693953 -6590359 + AT_rich Low_complexity Low_complexity 1 29 0 4 1452 1117 83 0 0 chr13 113694363 113694507 -6589805 + B1_Mus2 SINE Alu 4 147 0 4 1452 2090 204 39 71 chr13 113695362 113695745 -6588567 - RMER20A LTR ERVK 0 516 147 4 1452 351 0 0 0 chr13 113695745 113695784 -6588528 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1452 2090 204 39 71 chr13 113695784 113695933 -6588379 - RMER20A LTR ERVK -370 146 1 4 1452 249 234 38 2 chr13 113696050 113696109 -6588203 + B1F SINE Alu 38 97 -23 4 1452 357 262 74 9 chr13 113696461 113696569 -6587743 - PB1D10 SINE Alu 0 117 3 4 1452 219 326 146 0 chr13 113696631 113696720 -6587592 + MIRb SINE MIR 24 125 -143 4 1452 374 317 145 38 chr13 113697342 113697660 -6586652 + L1MC LINE L1 4967 5318 -828 4 1452 483 291 68 11 chr13 113697675 113697852 -6586460 + B3A SINE B2 1 187 -11 4 1452 671 292 98 79 chr13 113697903 113698580 -6585732 + L1MB7 LINE L1 5371 6062 -122 4 1452 1325 68 62 0 chr13 113698580 113698757 -6585555 + B2_Mm2 SINE B2 2 189 -6 4 1452 671 292 98 79 chr13 113698757 113698866 -6585446 + L1MB7 LINE L1 6063 6171 -13 4 1452 309 287 58 0 chr13 113699251 113699338 -6584974 + B3A SINE B2 3 94 -104 4 1452 1209 88 33 11 chr13 113699376 113699560 -6584752 - B2_Mm2 SINE B2 -7 188 1 4 1452 308 288 62 0 chr13 113699772 113699852 -6584460 - PB1 SINE Alu -34 93 9 4 1452 200 358 51 38 chr13 113700841 113700998 -6583314 - MER5A DNA MER1_type -10 179 21 4 1452 23 0 0 0 chr13 113701869 113701892 -6582420 + AT_rich Low_complexity Low_complexity 1 23 0 4 1452 325 233 246 17 chr13 113701970 113702088 -6582224 - RSINE1 SINE B4 0 165 21 4 1452 808 137 237 21 chr13 113702212 113702398 -6581914 + URR1A DNA MER1_type 1 226 0 4 1452 852 178 7 0 chr13 113702698 113702844 -6581468 + B1_Mur4 SINE Alu 1 147 -3 4 1452 225 303 37 75 chr13 113702916 113703023 -6581289 - PB1D10 SINE Alu -14 103 1 4 1452 200 35 35 0 chr13 113704451 113704480 -6579832 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 4 1452 241 316 49 69 chr13 113705462 113705707 -6578605 + L1MEf LINE L1 1399 1638 -5696 4 1452 336 250 13 53 chr13 113705719 113705795 -6578517 + ID SINE ID 2 74 -150 4 1452 323 271 7 122 chr13 113705795 113705846 -6578466 + ID4 SINE ID 2 112 -40 4 1452 575 230 66 15 chr13 113705846 113705983 -6578329 + B3 SINE B2 2 145 -71 4 1452 613 250 110 0 chr13 113706481 113706645 -6577667 + B3A SINE B2 1 182 -16 4 1452 245 195 25 38 chr13 113706679 113706759 -6577553 + L1MEf LINE L1 2171 2249 -4853 4 1452 960 71 0 0 chr13 113706796 113706922 -6577390 + B1_Mus1 SINE Alu 23 148 0 4 1452 448 312 82 31 chr13 113707468 113707723 -6576589 + L1MEf LINE L1 4807 5074 -1932 4 1452 722 178 0 15 chr13 113709710 113709841 -6574471 - B1_Mur4 SINE Alu -20 130 2 4 1452 287 281 62 0 chr13 113709901 113709997 -6574315 - RSINE1 SINE B4 -61 104 3 4 1452 318 385 41 41 chr13 113710251 113710446 -6573866 - MIRb SINE MIR -69 199 5 4 1452 291 214 131 37 chr13 113712362 113712469 -6571843 + PB1D10 SINE Alu 1 117 0 4 1452 243 0 0 0 chr13 113712569 113712596 -6571716 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1452 883 83 9 1 chr13 113712596 113712725 -6571587 - B1_Mm SINE Alu 0 147 21 4 1452 1080 168 10 34 chr13 113712767 113712976 -6571336 + B3 SINE B2 2 205 -11 4 1452 467 190 106 39 chr13 113713002 113713106 -6571206 + B1_Mur1 SINE Alu 1 111 -38 4 1452 1206 21 0 7 chr13 113713254 113713397 -6570915 + B1_Mm SINE Alu 1 142 -5 4 1452 478 231 29 44 chr13 113713560 113713696 -6570616 - RSINE1 SINE B4 -30 135 2 4 1452 332 290 0 0 chr13 113713741 113713810 -6570502 - B3 SINE B2 -17 199 131 4 1452 232 276 41 31 chr13 113713821 113713918 -6570394 - Charlie1a DNA MER1_type -94 1361 1264 4 1452 333 0 0 0 chr13 113713921 113713958 -6570354 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1452 587 260 156 13 chr13 113713981 113714219 -6570093 - B4A SINE B4 -6 286 15 4 1452 306 195 204 11 chr13 113714225 113714313 -6569999 - PB1D7 SINE Alu 0 120 16 4 1452 189 0 0 0 chr13 113714678 113714699 -6569613 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 4 1452 699 217 150 40 chr13 113714701 113714874 -6569438 + B3 SINE B2 13 204 -12 4 1452 280 287 36 96 chr13 113714973 113715128 -6569184 + B4A SINE B4 15 153 -71 4 1452 180 0 0 0 chr13 113715420 113715440 -6568872 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1452 337 176 237 21 chr13 113715684 113715777 -6568535 + PB1D10 SINE Alu 1 113 -4 4 1452 1230 28 14 0 chr13 113715891 113716035 -6568277 + B1_Mm SINE Alu 2 147 0 4 1452 245 75 25 0 chr13 113716042 113716082 -6568230 + (TAA)n Simple_repeat Simple_repeat 2 42 0 4 1452 807 253 189 14 chr13 113716085 113716366 -6567946 - MTD LTR MaLR -30 389 60 4 1452 488 240 202 34 chr13 113716435 113716668 -6567644 - B4A SINE B4 -19 273 2 4 1452 23 0 0 0 chr13 113716678 113716701 -6567611 + AT_rich Low_complexity Low_complexity 1 23 0 4 1452 245 326 10 10 chr13 113716837 113716936 -6567376 + PB1D10 SINE Alu 3 101 -16 4 1452 405 0 0 0 chr13 113716945 113716990 -6567322 + (TTA)n Simple_repeat Simple_repeat 1 45 0 4 1452 1219 75 42 31 chr13 113719180 113719372 -6564940 + B2_Mm2 SINE B2 1 194 -1 4 1452 357 24 0 0 chr13 113719383 113719425 -6564887 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1452 594 255 16 36 chr13 113719973 113720122 -6564190 + B3A SINE B2 18 154 -41 4 1452 294 29 0 0 chr13 113720122 113720157 -6564155 + (CA)n Simple_repeat Simple_repeat 2 36 0 4 1452 347 273 33 120 chr13 113720157 113720190 -6564122 + B2_Mm2 SINE B2 155 184 -11 4 1452 209 366 129 55 chr13 113721449 113721666 -6562646 - MIRb SINE MIR -7 261 29 4 1452 317 295 32 24 chr13 113721781 113721906 -6562406 + RMER12 LTR ERVK 725 850 -472 4 1452 519 181 160 25 chr13 113721967 113722086 -6562226 - B1_Mur4 SINE Alu -13 137 3 4 1452 201 74 0 0 chr13 113722187 113722214 -6562098 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4 1452 884 144 20 7 chr13 113722250 113722397 -6561915 + B1_Mur2 SINE Alu 1 149 0 4 1452 753 271 20 36 chr13 113723469 113723651 -6560661 + B3A SINE B2 4 183 -15 4 1452 189 74 0 0 chr13 113723651 113723678 -6560634 + (CA)n Simple_repeat Simple_repeat 2 28 0 4 1452 753 271 20 36 chr13 113723678 113723690 -6560622 + B3A SINE B2 184 195 -3 4 1452 1555 135 154 99 chr13 113723807 113724152 -6560160 - ORR1B2 LTR MaLR -1 366 3 4 1452 209 119 24 0 chr13 113724152 113724194 -6560118 + (GAAA)n Simple_repeat Simple_repeat 1 43 0 4 1452 278 281 103 17 chr13 113724313 113724429 -6559883 - MLT1H2 LTR MaLR 0 489 364 4 1452 748 270 138 45 chr13 113724621 113724912 -6559400 - MER2 DNA MER2_type -1 344 27 4 1452 531 312 0 53 chr13 113724964 113725116 -6559196 - MLT1H2 LTR MaLR -320 169 26 4 1452 316 217 71 0 chr13 113725477 113725568 -6558744 - PB1D9 SINE Alu -2 118 17 4 1452 215 316 51 26 chr13 113725517 113725595 -6558717 - B4A SINE B4 -140 152 73 4 1452 1216 48 0 27 chr13 113726698 113726848 -6557464 + B1_Mm SINE Alu 1 146 -1 4 1452 237 309 128 28 chr13 113726938 113727118 -6557194 + L1ME2 LINE L1 5325 5522 -718 4 1452 576 160 203 27 chr13 113727219 113727367 -6556945 - MTD LTR MaLR -2 417 244 4 1452 331 343 100 73 chr13 113727395 113727615 -6556697 + L1ME2 LINE L1 5615 5840 -324 4 1452 339 218 51 0 chr13 113728668 113728746 -6555566 + L1MB2 LINE L1 5343 5424 -754 4 1452 1692 215 69 13 chr13 113728890 113729342 -6554970 - MT2A LTR ERVL 0 533 57 4 1452 746 264 27 107 chr13 113729330 113729517 -6554795 + B3 SINE B2 15 191 -25 4 1452 436 218 11 0 chr13 113729538 113729625 -6554687 - MT2A LTR ERVL -445 88 1 4 1452 227 259 171 12 chr13 113729627 113729709 -6554603 + L1MB2 LINE L1 5618 5712 -471 4 1452 389 305 34 68 chr13 113729809 113730073 -6554239 + L1MB2 LINE L1 5850 6104 -67 4 1452 799 176 35 14 chr13 113731106 113731250 -6553062 - B1_Mur2 SINE Alu -2 147 1 4 1452 460 289 45 67 chr13 113731254 113731432 -6552880 - B4A SINE B4 -67 225 52 4 1452 353 284 39 39 chr13 113731462 113731590 -6552722 - MER58C DNA MER1_type -84 131 4 4 1452 312 27 0 0 chr13 113732258 113732295 -6552017 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1452 615 261 31 37 chr13 113732311 113732474 -6551838 - B3A SINE B2 -36 162 1 4 1452 763 290 107 26 chr13 113732488 113732796 -6551516 + MTD LTR MaLR 74 406 -13 4 1452 247 267 76 51 chr13 113732885 113732964 -6551348 - ID4 SINE ID -2 81 1 4 1452 294 250 182 18 chr13 113733509 113733619 -6550693 + B3A SINE B2 80 207 -9 4 1452 180 0 0 0 chr13 113733621 113733641 -6550671 + (TAA)n Simple_repeat Simple_repeat 1 20 0 4 1452 703 100 264 0 chr13 113734086 113734196 -6550116 + B1_Mus1 SINE Alu 1 139 -9 4 1452 414 218 39 19 chr13 113734389 113734492 -6549820 + ID_B1 SINE B4 112 216 -8 5 1452 486 219 16 58 chr13 113734957 113735078 -6549234 + PB1D7 SINE Alu 2 117 -3 5 1452 1115 166 95 161 chr13 113735973 113736353 -6547959 - ORR1C1 LTR MaLR -23 355 1 5 1452 228 67 0 0 chr13 113737112 113737142 -6547170 + (CAG)n Simple_repeat Simple_repeat 2 31 0 5 1452 217 266 15 15 chr13 113737876 113737941 -6546371 + RSINE1 SINE B4 4 68 -97 5 1452 754 226 29 0 chr13 113738141 113738278 -6546034 - B1F SINE Alu -8 141 1 5 1452 314 326 30 10 chr13 113738196 113738295 -6546017 - B4A SINE B4 -125 167 67 5 1452 217 306 156 32 chr13 113738742 113738955 -6545357 - MIRm SINE MIR -29 247 6 5 1452 351 274 42 22 chr13 113739132 113739250 -6545062 + B1F SINE Alu 6 120 0 5 1452 314 314 78 31 chr13 113739293 113739310 -6545002 - B4 SINE B4 -73 219 197 5 1452 1080 102 7 0 chr13 113739317 113739464 -6544848 - B1_Mus1 SINE Alu 0 148 1 5 1452 314 314 78 31 chr13 113739464 113739567 -6544745 - B4 SINE B4 -96 196 86 5 1452 557 72 12 0 chr13 113739595 113739678 -6544634 + (TA)n Simple_repeat Simple_repeat 1 84 0 5 1452 299 219 12 12 chr13 113740438 113740521 -6543791 + B3 SINE B2 1 83 -133 5 1452 1109 187 19 28 chr13 113740594 113740808 -6543504 + B3 SINE B2 5 216 0 5 1452 216 0 0 0 chr13 113741434 113741458 -6542854 + (T)n Simple_repeat Simple_repeat 1 24 0 5 1452 1250 41 0 0 chr13 113741458 113741605 -6542707 - B1_Mus1 SINE Alu 0 148 2 5 1452 740 174 213 18 chr13 113741776 113741940 -6542372 - B3 SINE B2 -14 202 7 5 1452 242 300 112 25 chr13 113742141 113742332 -6541980 - MIRb SINE MIR -27 241 18 5 1452 468 0 0 0 chr13 113743205 113743257 -6541055 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1452 1212 43 0 0 chr13 113743574 113743715 -6540597 - B1_Mus1 SINE Alu -3 145 5 5 1452 286 233 124 19 chr13 113744956 113745061 -6539251 + PB1 SINE Alu 2 117 -10 5 1452 292 250 0 50 chr13 113745218 113745298 -6539014 - ID2 SINE ID -4 79 4 5 1452 591 267 58 0 chr13 113745824 113746015 -6538297 + B3 SINE B2 2 203 -13 5 1452 319 220 40 90 chr13 113746856 113746956 -6537356 + B3A SINE B2 88 182 -16 5 1452 1254 41 0 7 chr13 113746991 113747140 -6537172 + B1_Mus1 SINE Alu 1 148 0 5 1452 189 74 0 0 chr13 113747141 113747168 -6537144 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 5 1452 660 188 8 8 chr13 113747297 113747415 -6536897 + B1_Mus2 SINE Alu 11 128 -19 5 1452 2219 140 17 90 chr13 113747463 113747941 -6536371 - RMER6A LTR ERVK -257 499 57 5 1452 410 268 92 32 chr13 113747970 113748155 -6536157 + B3A SINE B2 3 198 0 5 1452 21 0 0 0 chr13 113748206 113748227 -6536085 + AT_rich Low_complexity Low_complexity 1 21 0 5 1452 285 260 41 20 chr13 113748268 113748280 -6536032 - Lx6 LINE L1 -863 6597 6586 5 1452 3486 176 27 3 chr13 113748280 113748868 -6535444 - Lx5 LINE L1 -1 7049 6448 5 1452 689 168 0 0 chr13 113748868 113748975 -6535337 - Lx5 LINE L1 -685 6365 6259 5 1452 675 233 30 0 chr13 113750072 113750205 -6534107 + B1_Mur2 SINE Alu 1 137 -12 5 1452 338 296 80 80 chr13 113750831 113751018 -6533294 + MER20 DNA MER1_type 1 187 -32 5 1452 233 300 98 24 chr13 113751704 113751827 -6532485 + Charlie7 DNA MER1_type 748 879 -1733 5 1452 251 256 49 37 chr13 113752157 113752238 -6532074 + ID4_ SINE ID 1 82 -1 5 1452 218 283 53 32 chr13 113752238 113752252 -6532060 + ID_B1 SINE B4 1 97 -127 5 1452 425 285 59 29 chr13 113752428 113752598 -6531714 - MLT1A0 LTR MaLR -20 345 171 5 1452 236 263 138 58 chr13 113753949 113754240 -6530072 - L1MC5 LINE L1 -234 7727 7414 5 1452 184 282 67 45 chr13 113754624 113754713 -6529599 - L3 LINE CR1 -3610 879 789 5 1452 264 241 8 152 chr13 113756294 113756313 -6527999 + MT2B LTR ERVL 153 264 -336 5 1452 616 176 0 36 chr13 113756313 113756425 -6527887 + PB1D9 SINE Alu 4 111 -9 5 1452 895 165 210 0 chr13 113756965 113757141 -6527171 - B3 SINE B2 -3 213 1 5 1452 559 169 198 43 chr13 113757739 113757913 -6526399 + B3 SINE B2 2 189 -6 5 1452 1397 72 44 0 chr13 113757913 113758094 -6526218 - B2_Mm2 SINE B2 -6 189 1 5 1452 231 241 31 94 chr13 113758407 113758535 -6525777 + LTR69 LTR ERVL 46 165 -423 5 1452 253 286 0 0 chr13 113758895 113758951 -6525361 + B4A SINE B4 90 145 -147 5 1452 517 226 10 0 chr13 113758905 113759007 -6525305 + PB1D10 SINE Alu 15 117 0 5 1452 1885 183 85 16 chr13 113759804 113760181 -6524131 - MTC LTR MaLR -2 419 17 5 1452 716 168 0 0 chr13 113760260 113760367 -6523945 + B1_Mur2 SINE Alu 37 143 -6 5 1452 1468 144 119 101 chr13 113760411 113760797 -6523515 - RLTR9C LTR ERVK 0 393 1 5 1452 453 287 54 8 chr13 113760982 113761112 -6523200 - RSINE1 SINE B4 -17 148 13 5 1452 325 286 73 61 chr13 113761624 113761788 -6522524 - MIR SINE MIR -30 232 67 5 1452 382 267 10 19 chr13 113762149 113762252 -6522060 + RSINE1 SINE B4 3 104 -61 5 1452 1252 54 0 0 chr13 113762483 113762630 -6521682 - B1_Mm SINE Alu 0 147 1 5 1452 283 295 101 37 chr13 113762655 113762764 -6521548 - ORR1E LTR MaLR -236 123 8 5 1452 1307 72 55 0 chr13 113763007 113763188 -6521124 + B2_Mm1t SINE B2 1 191 -2 5 1452 225 207 177 48 chr13 113763193 113763340 -6520972 + L1M4 LINE L1 5159 5324 -822 5 1452 1397 71 22 0 chr13 113763349 113763531 -6520781 + B2_Mm2 SINE B2 1 186 -9 5 1452 471 279 13 0 chr13 113763541 113763699 -6520613 + L1M3 LINE L1 3957 4116 -2024 5 1452 487 225 98 3 chr13 113763702 113763843 -6520469 + ORR1E LTR MaLR 220 379 0 5 1452 2716 257 93 72 chr13 113763843 113764864 -6519448 + ORR1E-int LTR MaLR 1 1301 -69 5 1452 294 293 137 25 chr13 113764995 113765156 -6519156 - RLTR15 LTR ERVK -146 213 35 5 1452 321 155 0 49 chr13 113765330 113765391 -6518921 + ORR1E-int LTR MaLR 1313 1370 0 5 1452 495 251 254 17 chr13 113765398 113765689 -6518623 + ORR1E LTR MaLR 8 367 -3 5 1452 1327 278 16 35 chr13 113765724 113766093 -6518219 + Tigger7 DNA MER2_type 31 392 -2099 5 1452 248 373 39 78 chr13 113766087 113766188 -6518124 + Tigger7 DNA MER2_type 2366 2466 -25 5 1452 1381 90 11 5 chr13 113766188 113766378 -6517934 + B2_Mm1t SINE B2 2 192 -1 5 1452 248 373 39 78 chr13 113766378 113766404 -6517908 + Tigger7 DNA MER2_type 2467 2488 -3 5 1452 530 203 143 0 chr13 113766901 113767031 -6517281 + MTEa LTR MaLR 3 151 -228 5 1452 335 298 80 48 chr13 113767031 113767072 -6517240 - RMER13A LTR ERVK 0 860 820 5 1452 216 0 0 0 chr13 113767072 113767096 -6517216 + (CTG)n Simple_repeat Simple_repeat 1 24 0 5 1452 335 298 80 48 chr13 113767096 113767241 -6517071 - RMER13A LTR ERVK -41 819 668 5 1452 399 341 30 0 chr13 113767287 113767422 -6516890 - RMER13A LTR ERVK -180 680 542 5 1452 504 0 0 0 chr13 113767422 113767478 -6516834 + (TG)n Simple_repeat Simple_repeat 2 57 0 5 1452 1797 165 75 9 chr13 113767486 113767817 -6516495 - RMER13A LTR ERVK -506 354 2 5 1452 272 296 48 79 chr13 113767834 113767853 -6516459 + MTEa LTR MaLR 203 219 -151 5 1452 480 56 67 0 chr13 113767853 113767943 -6516369 + (TCTCTG)n Simple_repeat Simple_repeat 1 96 0 5 1452 272 296 48 79 chr13 113767943 113768088 -6516224 + MTEa LTR MaLR 220 362 -8 5 1452 1544 54 0 5 chr13 113768538 113768725 -6515587 - B2_Mm2 SINE B2 -9 186 1 5 1452 666 159 53 0 chr13 113769259 113769372 -6514940 + B1_Mus2 SINE Alu 28 146 -1 5 1452 293 281 22 33 chr13 113770060 113770152 -6514160 + MLT1A1 LTR MaLR 52 142 -266 5 1452 200 152 0 42 chr13 113770161 113770209 -6514103 + T-rich Low_complexity Low_complexity 2 47 0 5 1452 213 39 0 0 chr13 113770232 113770258 -6514054 + (GTTTG)n Simple_repeat Simple_repeat 2 27 0 5 1452 726 199 0 20 chr13 113770258 113770397 -6513915 - B1_Mus1 SINE Alu -9 139 3 5 181 333 0 0 0 chr13 113770473 113770510 -6513802 + (GA)n Simple_repeat Simple_repeat 1 37 0 5 1453 621 230 38 32 chr13 113770587 113770744 -6513568 + ORR1D1 LTR MaLR 1 158 -216 5 1453 1566 182 208 16 chr13 113770745 113771124 -6513188 - MT2A LTR ERVL 0 533 82 5 1453 530 46 0 0 chr13 113771128 113771193 -6513119 + B1_Mus2 SINE Alu 68 132 -15 5 1453 765 33 0 0 chr13 113771194 113771286 -6513026 + (GAGAA)n Simple_repeat Simple_repeat 1 92 0 5 1453 2696 184 23 25 chr13 113771396 113771924 -6512388 + RLTR11A2 LTR ERVK 1 527 0 5 1453 245 291 76 45 chr13 113772038 113772207 -6512105 - MIRc SINE MIR -92 184 3 5 1453 1657 180 36 6 chr13 113772822 113773158 -6511154 - L1_Mur3 LINE L1 -2160 3720 3375 5 1453 3892 232 96 55 chr13 113773158 113773360 -6510952 - RMER12 LTR ERVK 0 1322 1133 5 1453 1393 95 5 0 chr13 113773360 113773550 -6510762 - B2_Mm2 SINE B2 -4 191 1 5 1453 3892 232 96 55 chr13 113773550 113773892 -6510420 - RMER12 LTR ERVK -190 1132 769 5 1453 360 111 0 0 chr13 113773892 113773946 -6510366 + (TGGA)n Simple_repeat Simple_repeat 1 54 0 5 1453 3892 232 96 55 chr13 113773946 113774606 -6509706 - RMER12 LTR ERVK -554 768 68 5 1453 186 314 154 16 chr13 113774646 113774769 -6509543 + MIR SINE MIR 48 187 -75 5 1453 1385 62 23 0 chr13 113775131 113775308 -6509004 + B2_Mm2 SINE B2 1 181 -14 5 1453 1328 66 33 0 chr13 113775308 113775489 -6508823 - B2_Mm1t SINE B2 -6 187 1 5 1453 362 265 25 41 chr13 113775548 113775670 -6508642 - MER53 DNA hAT -43 150 31 5 1453 210 150 0 0 chr13 113775697 113775737 -6508575 + (T)n Simple_repeat Simple_repeat 1 40 0 5 1453 1147 54 0 52 chr13 113775737 113775892 -6508420 - B1_Mus2 SINE Alu 0 147 1 5 1453 1045 165 160 27 chr13 113776218 113776474 -6507838 + Lx5 LINE L1 6761 7050 0 5 1453 288 0 0 0 chr13 113779533 113779565 -6504747 + (TC)n Simple_repeat Simple_repeat 1 32 0 5 1453 216 0 0 0 chr13 113779565 113779588 -6504724 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1453 1347 99 0 3 chr13 113782024 113782329 -6501983 + (GGA)n Simple_repeat Simple_repeat 1 303 0 5 1453 1668 16 16 0 chr13 113782329 113782518 -6501794 + B2_Mm1a SINE B2 1 192 -1 5 1453 468 0 0 0 chr13 113782685 113782737 -6501575 + (TC)n Simple_repeat Simple_repeat 1 52 0 5 1453 471 63 0 0 chr13 113783230 113783293 -6501019 + (TCCCC)n Simple_repeat Simple_repeat 1 63 0 5 1453 257 271 78 68 chr13 113783293 113783396 -6500916 - B1F SINE Alu 0 149 46 5 1453 1629 16 38 0 chr13 113785679 113785864 -6498448 + B2_Mm1a SINE B2 1 192 -1 6 1453 402 21 0 0 chr13 113786335 113786382 -6497930 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 6 1453 710 218 253 0 chr13 113787987 113788161 -6496151 - ID_B1 SINE B4 0 224 7 6 1453 285 205 85 23 chr13 113788175 113788273 -6496039 - PB1D10 SINE Alu -44 105 4 6 1453 239 324 114 7 chr13 113788289 113788438 -6495874 - MIRb SINE MIR 0 268 104 6 1453 25 0 0 0 chr13 113789528 113789553 -6494759 + AT_rich Low_complexity Low_complexity 1 25 0 6 1453 328 232 115 72 chr13 113789711 113789850 -6494462 - ID_B1 SINE B4 -1 223 79 6 1453 464 232 39 156 chr13 113790086 113790265 -6494047 + B4 SINE B4 68 225 -67 6 1453 874 67 0 55 chr13 113790146 113790273 -6494039 + B1_Mus1 SINE Alu 29 148 0 6 1453 344 287 11 128 chr13 113790373 113790530 -6493782 + B3A SINE B2 31 168 -30 6 1453 312 27 0 0 chr13 113790530 113790567 -6493745 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1453 344 287 11 128 chr13 113790567 113790589 -6493723 + B3A SINE B2 169 189 -9 6 1453 302 157 96 64 chr13 113791466 113791623 -6492689 - Lx8 LINE L1 -1 7472 7311 6 1453 1278 103 11 0 chr13 113791948 113792132 -6492180 - B2_Mm1t SINE B2 -3 190 5 6 1453 273 290 196 20 chr13 113792132 113792280 -6492032 - MLT1B LTR MaLR -67 307 134 6 1453 309 214 69 35 chr13 113792308 113792395 -6491917 - MLT1B LTR MaLR -300 90 1 6 1453 182 275 0 115 chr13 113792405 113792483 -6491829 - L2a LINE L2 -232 3194 3126 6 1453 257 318 155 7 chr13 113792576 113792731 -6491581 - L2a LINE L2 -287 3139 2962 6 1453 222 37 0 0 chr13 113792934 113792961 -6491351 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1453 470 233 14 65 chr13 113792993 113793131 -6491181 - B1_Mur1 SINE Alu -18 131 1 6 1453 1153 62 0 14 chr13 113793467 113793615 -6490697 - B1_Mus2 SINE Alu 0 147 2 6 1453 183 114 0 0 chr13 113793620 113793655 -6490657 + (T)n Simple_repeat Simple_repeat 1 35 0 6 1453 24860 93 14 3 chr13 113793683 113797825 -6486487 - L1Md_F LINE L1 -1189 4694 504 6 1453 329 250 55 117 chr13 113797826 113797971 -6486341 - B1F2 SINE Alu -13 136 1 6 1453 225 0 0 0 chr13 113797981 113798006 -6486306 + (TC)n Simple_repeat Simple_repeat 2 26 0 6 1453 3186 239 67 26 chr13 113798006 113798853 -6485459 - RMER1C Other Other -9 1333 452 6 1453 998 205 0 11 chr13 113799267 113799454 -6484858 - B2_Mm2 SINE B2 -9 186 2 6 1453 240 325 58 11 chr13 113799465 113799552 -6484760 - MLT1A LTR MaLR -282 92 2 6 1453 719 288 64 53 chr13 113800580 113800668 -6483644 - L1MB8 LINE L1 -2 6176 6091 6 1453 1354 51 56 0 chr13 113800668 113800846 -6483466 - B2_Mm2 SINE B2 -6 189 2 6 1453 719 288 64 53 chr13 113800846 113801116 -6483196 - L1MB8 LINE L1 -88 6090 5814 6 1453 309 280 22 22 chr13 113801116 113801251 -6483061 + (TG)n Simple_repeat Simple_repeat 2 136 0 6 1453 489 294 17 79 chr13 113801253 113801285 -6483027 - B4A SINE B4 0 292 270 6 1453 222 118 0 0 chr13 113801285 113801319 -6482993 + (TG)n Simple_repeat Simple_repeat 1 34 0 6 1453 489 294 17 79 chr13 113801319 113801463 -6482849 - B4A SINE B4 -23 269 127 6 1453 622 232 29 18 chr13 113801486 113801657 -6482655 - L1MB7 LINE L1 -201 5983 5811 6 1453 222 342 118 17 chr13 113801716 113801835 -6482477 - B4A SINE B4 -161 131 1 6 1453 865 195 119 0 chr13 113801938 113802123 -6482189 - B3 SINE B2 -6 210 4 6 1453 339 65 0 0 chr13 113802207 113802253 -6482059 + (T)n Simple_repeat Simple_repeat 1 46 0 6 1453 525 32 0 0 chr13 113802812 113802875 -6481437 + (GA)n Simple_repeat Simple_repeat 2 64 0 6 1453 914 305 91 22 chr13 113802892 113803354 -6480958 - L1MC1 LINE L1 -20 6313 5820 6 1453 234 0 0 0 chr13 113803784 113803810 -6480502 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 6 1453 2845 16 6 0 chr13 113803879 113804199 -6480113 + RLTRETN_Mm LTR ERVK 1 322 0 6 1453 1156 101 47 0 chr13 113804645 113804814 -6479498 + B2_Mm2 SINE B2 2 178 -17 6 1453 332 273 40 0 chr13 113805055 113805154 -6479158 + L1MC LINE L1 5669 5771 -562 6 1453 658 257 102 34 chr13 113805191 113805457 -6478855 + Lx8 LINE L1 7185 7468 -5 6 1453 2841 38 0 55 chr13 113805480 113805539 -6478773 - ORR1A0 LTR MaLR 0 346 290 6 1453 1229 54 0 0 chr13 113805539 113805686 -6478626 - B1_Mm SINE Alu 0 147 1 6 1453 2841 38 0 55 chr13 113805686 113805992 -6478320 - ORR1A0 LTR MaLR -57 289 1 6 1453 5608 41 9 6 chr13 113805992 113806729 -6477583 - ORR1A0-int LTR MaLR 0 1792 1073 6 1453 359 157 0 14 chr13 113806736 113806807 -6477505 + (TA)n Simple_repeat Simple_repeat 2 71 0 6 1453 2876 123 4 22 chr13 113806902 113807352 -6476960 + RLTR11B LTR ERVK 12 453 0 6 1453 302 300 0 0 chr13 113807576 113807646 -6476666 - ID4_ SINE ID -9 74 5 6 1453 1259 243 91 18 chr13 113807731 113808070 -6476242 - ORR1D2 LTR MaLR 0 370 7 6 1453 387 0 0 0 chr13 113808070 113808113 -6476199 + (TC)n Simple_repeat Simple_repeat 1 43 0 6 1453 234 0 0 0 chr13 113808113 113808138 -6476174 + (CA)n Simple_repeat Simple_repeat 1 26 0 6 1453 498 279 23 8 chr13 113808140 113808270 -6476042 - RSINE1 SINE B4 -31 134 3 6 1453 315 306 27 81 chr13 113808478 113808663 -6475649 - MTEa LTR MaLR -6 373 199 6 1453 376 177 35 21 chr13 113808670 113808814 -6475498 + GA-rich Low_complexity Low_complexity 2 147 0 6 1453 1147 52 0 0 chr13 113808984 113809119 -6475193 + B1_Mus1 SINE Alu 2 136 -12 6 1453 207 0 0 0 chr13 113809119 113809142 -6475170 + (CAAAA)n Simple_repeat Simple_repeat 1 23 0 6 1453 764 178 0 22 chr13 113809812 113809996 -6474316 + (TA)n Simple_repeat Simple_repeat 1 180 0 6 1453 376 207 18 0 chr13 113810038 113810149 -6474163 + (CATA)n Simple_repeat Simple_repeat 3 115 0 6 1453 263 294 44 56 chr13 113810170 113810260 -6474052 + RSINE1 SINE B4 76 164 -1 6 1453 8819 17 0 0 chr13 113810270 113811251 -6473061 - L1Md_A LINE L1 -1 6581 5601 6 1453 462 216 207 12 chr13 113811339 113811503 -6472809 + ORR1E LTR MaLR 1 196 -163 6 1453 182 241 36 18 chr13 113811966 113812021 -6472291 - MIRc SINE MIR -18 250 195 6 1453 1924 112 28 22 chr13 113812124 113812444 -6471868 - RLTRETN_Mm LTR ERVK 0 322 1 6 1453 911 303 42 0 chr13 113812701 113812962 -6471350 + B4A SINE B4 1 272 -20 6 1453 333 0 0 0 chr13 113812977 113813014 -6471298 + (CA)n Simple_repeat Simple_repeat 2 38 0 6 1453 655 306 21 62 chr13 113813173 113813462 -6470850 - B4A SINE B4 -15 277 1 6 1453 244 238 159 0 chr13 113813891 113813954 -6470358 - ID4 SINE ID -8 75 3 6 1453 342 0 0 0 chr13 113813990 113814028 -6470284 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1453 1175 56 21 0 chr13 113814638 113814782 -6469530 - B1_Mus2 SINE Alu 0 147 1 6 1453 905 144 14 0 chr13 113814861 113815007 -6469305 - B1_Mus1 SINE Alu 0 148 1 6 1453 402 249 35 0 chr13 113815007 113815095 -6469217 - B1F1 SINE Alu -12 108 18 6 1453 189 0 0 0 chr13 113815322 113815343 -6468969 + (TA)n Simple_repeat Simple_repeat 1 21 0 6 1453 1226 104 71 0 chr13 113815729 113815911 -6468401 - B2_Mm2 SINE B2 0 195 1 6 1453 261 331 61 8 chr13 113816111 113816242 -6468070 + MER33 DNA MER1_type 22 159 -165 6 1453 860 72 0 0 chr13 113816239 113816350 -6467962 - B1_Mus1 SINE Alu 0 148 38 6 1453 21 0 0 0 chr13 113816381 113816402 -6467910 + AT_rich Low_complexity Low_complexity 1 21 0 6 1453 306 283 7 52 chr13 113816671 113816824 -6467488 + (TG)n Simple_repeat Simple_repeat 1 146 0 6 1453 321 169 43 130 chr13 113816834 113817018 -6467294 - HAL1-2a_MD LINE L1 -517 2507 2340 6 1453 405 329 59 20 chr13 113817043 113817195 -6467117 - RSINE1 SINE B4 0 165 8 6 1453 369 145 0 0 chr13 113817298 113817360 -6466952 + (TTTTC)n Simple_repeat Simple_repeat 3 64 0 6 1453 975 119 0 0 chr13 113817361 113817495 -6466817 - B1_Mus2 SINE Alu 0 147 14 6 1453 392 290 48 109 chr13 113817368 113817515 -6466797 - B4 SINE B4 -73 219 82 6 1453 261 189 57 0 chr13 113817649 113817702 -6466610 + MER57F LTR ERV1 239 294 -142 6 1453 646 187 104 7 chr13 113817705 113817840 -6466472 + B1F2 SINE Alu 1 148 -1 6 1453 189 0 0 0 chr13 113817844 113817865 -6466447 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 6 1453 792 262 106 74 chr13 113818102 113818435 -6465877 + MTE2a LTR MaLR 63 409 -10 6 1453 394 331 18 92 chr13 113819248 113819411 -6464901 - ID_B1 SINE B4 0 224 74 6 1453 329 213 152 50 chr13 113819592 113819691 -6464621 + LTR40a LTR ERVL 406 514 -5 6 1453 254 185 0 129 chr13 113820607 113820669 -6463643 + RLTR25A LTR ERVK 519 572 -531 6 1453 719 64 0 0 chr13 113820624 113820718 -6463594 + B1_Mus2 SINE Alu 54 147 0 6 1453 198 0 0 0 chr13 113820718 113820740 -6463572 + (A)n Simple_repeat Simple_repeat 1 22 0 6 1453 876 187 0 0 chr13 113820753 113820892 -6463420 + B1_Mus1 SINE Alu 1 139 -9 6 1453 204 40 0 0 chr13 113820892 113820917 -6463395 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 6 1453 32 0 0 0 chr13 113820999 113821031 -6463281 + AT_rich Low_complexity Low_complexity 1 32 0 6 1453 511 172 111 0 chr13 113821259 113821358 -6462954 - B1_Mur2 SINE Alu 0 149 40 6 1453 250 257 0 159 chr13 113821296 113821384 -6462928 - MT2B LTR ERVL -347 254 181 6 1453 362 323 80 80 chr13 113821655 113821904 -6462408 + B4A SINE B4 24 272 -20 6 1453 473 0 18 0 chr13 113821905 113821962 -6462350 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1453 211 176 0 38 chr13 113823103 113823156 -6461156 + GA-rich Low_complexity Low_complexity 6 56 0 6 1453 228 287 62 98 chr13 113823158 113823245 -6461067 + B1_Mur1 SINE Alu 42 131 -18 6 1453 256 29 0 103 chr13 113823245 113823323 -6460989 + (CCA)n Simple_repeat Simple_repeat 1 70 0 6 1453 228 287 62 98 chr13 113823323 113823347 -6460965 + B1_Mur1 SINE Alu 132 149 0 6 1453 406 234 11 0 chr13 113823357 113823451 -6460861 + Lx5 LINE L1 6914 7008 -42 6 1453 254 266 0 92 chr13 113823754 113823841 -6460471 - ID4_ SINE ID -3 80 2 6 1453 219 36 0 0 chr13 113824073 113824101 -6460211 + (CA)n Simple_repeat Simple_repeat 1 28 0 7 1453 1071 168 33 28 chr13 113826443 113826657 -6457655 - B3 SINE B2 -1 215 1 7 1453 308 306 95 34 chr13 113827007 113827186 -6457126 + B4 SINE B4 34 223 -69 7 1453 556 175 83 0 chr13 113827078 113827198 -6457114 + B1_Mus1 SINE Alu 19 148 0 7 1453 444 248 180 8 chr13 113827424 113827546 -6456766 + RSINE1 SINE B4 2 144 -21 7 1453 1514 241 139 10 chr13 113828789 113829300 -6455012 - Lx8 LINE L1 -2 7471 6895 7 1453 1137 82 0 0 chr13 113829309 113829456 -6454856 - B1_Mus1 SINE Alu 0 148 2 7 1453 359 293 117 39 chr13 113829803 113829931 -6454381 + ID_B1 SINE B4 84 221 -3 7 1453 296 346 6 19 chr13 113830394 113830556 -6453756 + CT-rich Low_complexity Low_complexity 3 162 0 7 1453 216 234 48 6 chr13 113830933 113831101 -6453211 + (TA)n Simple_repeat Simple_repeat 1 175 0 7 1453 180 0 0 0 chr13 113831723 113831743 -6452569 + (TG)n Simple_repeat Simple_repeat 1 20 0 7 1453 237 344 41 15 chr13 113832054 113832181 -6452131 - MIRc SINE MIR -19 189 56 7 1453 426 65 0 0 chr13 113832679 113832741 -6451571 + (TTTA)n Simple_repeat Simple_repeat 3 64 0 7 1453 1027 68 0 15 chr13 113832763 113832898 -6451414 - B1_Mus1 SINE Alu -2 146 14 7 1453 333 186 0 0 chr13 113832885 113832944 -6451368 + B1_Mur3 SINE Alu 91 149 0 7 1453 437 215 83 9 chr13 113833772 113833880 -6450432 - PB1D10 SINE Alu 0 117 2 7 1453 284 246 0 0 chr13 113833917 113833974 -6450338 - B1_Mur1 SINE Alu -28 121 65 7 1453 477 271 0 41 chr13 113833949 113834072 -6450240 - ID_B1 SINE B4 -28 196 79 7 1453 21 0 0 0 chr13 113834074 113834095 -6450217 + AT_rich Low_complexity Low_complexity 1 21 0 7 1453 1121 204 14 5 chr13 113834322 113834534 -6449778 + B3 SINE B2 1 214 -2 7 1453 219 69 0 0 chr13 113834852 113834881 -6449431 + (C)n Simple_repeat Simple_repeat 1 29 0 7 1453 214 274 0 0 chr13 113835908 113835970 -6448342 + A-rich Low_complexity Low_complexity 1 62 0 7 1453 551 233 4 0 chr13 113837271 113837529 -6446783 + (CA)n Simple_repeat Simple_repeat 1 259 0 7 1453 263 50 50 0 chr13 113837566 113837606 -6446706 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 7 1453 340 318 0 0 chr13 113838230 113838337 -6445975 + PB1D10 SINE Alu 10 116 -1 7 1453 393 211 0 0 chr13 113838371 113838494 -6445818 + (CCA)n Simple_repeat Simple_repeat 2 124 0 7 1453 243 236 0 0 chr13 113838494 113838549 -6445763 + CT-rich Low_complexity Low_complexity 3 57 0 7 1453 1172 105 52 0 chr13 113838714 113838886 -6445426 - B2_Mm2 SINE B2 -14 181 1 7 1453 256 186 34 0 chr13 113839428 113839487 -6444825 + (TATG)n Simple_repeat Simple_repeat 3 63 0 7 1453 495 311 0 0 chr13 113839487 113839619 -6444693 - RSINE1 SINE B4 0 165 34 7 1453 413 277 18 0 chr13 113839643 113839755 -6444557 - PB1 SINE Alu -8 119 6 7 1453 342 127 0 0 chr13 113840304 113840375 -6443937 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 7 1453 259 269 93 43 chr13 113840900 113841040 -6443272 - L1MA6 LINE L1 -10 6290 6144 7 1453 22 56 0 0 chr13 113841040 113841076 -6443236 + AT_rich Low_complexity Low_complexity 1 36 0 7 1453 570 219 14 49 chr13 113841192 113841336 -6442976 - RSINE1 SINE B4 -24 141 3 7 1453 287 146 0 18 chr13 113841518 113841574 -6442738 + CT-rich Low_complexity Low_complexity 2 56 0 7 1453 515 56 14 0 chr13 113841583 113841654 -6442658 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 7 1453 823 234 0 6 chr13 113841657 113841816 -6442496 - RSINE1 SINE B4 0 165 8 7 1453 182 317 161 28 chr13 113842508 113842651 -6441661 - L3 LINE CR1 -207 4282 4121 7 1453 280 303 37 0 chr13 113843147 113843256 -6441056 + PB1 SINE Alu 2 114 -13 7 1453 446 285 27 34 chr13 113843301 113843450 -6440862 - RMER30 DNA MER1_type -35 167 20 7 1453 757 181 0 45 chr13 113843853 113844009 -6440303 + B1_Mur3 SINE Alu 1 149 0 7 1453 420 277 79 31 chr13 113844069 113844232 -6440080 - B3A SINE B2 -37 179 22 7 1453 243 277 60 0 chr13 113845192 113845275 -6439037 - MLT1D LTR MaLR -411 94 7 7 1453 284 175 16 0 chr13 113846514 113846577 -6437735 + (TA)n Simple_repeat Simple_repeat 2 65 0 7 1453 1234 48 0 0 chr13 113846696 113846842 -6437470 + B1_Mus1 SINE Alu 1 146 -2 7 1453 603 206 0 0 chr13 113846958 113847176 -6437136 + (GCGTG)n Simple_repeat Simple_repeat 1 218 0 7 1453 260 208 0 0 chr13 113847177 113847230 -6437082 + (GGGTG)n Simple_repeat Simple_repeat 5 57 0 7 1453 235 67 43 22 chr13 113847477 113847523 -6436789 + (TTCC)n Simple_repeat Simple_repeat 3 49 0 7 1453 524 217 89 32 chr13 113847523 113847647 -6436665 - B1F1 SINE Alu -18 131 1 7 1453 377 326 28 28 chr13 113847865 113848042 -6436270 - LTR83 LTR ERVL 0 780 604 7 1453 291 93 0 0 chr13 113848303 113848346 -6435966 + (TCTA)n Simple_repeat Simple_repeat 2 44 0 7 1453 537 224 31 50 chr13 113848347 113848507 -6435805 - RSINE1 SINE B4 -4 161 5 7 1453 717 12 0 0 chr13 113848815 113848897 -6435415 + (TA)n Simple_repeat Simple_repeat 2 83 0 7 1453 871 276 29 123 chr13 113848950 113849363 -6434949 - MTE2a LTR MaLR 0 379 6 7 1453 3467 244 17 36 chr13 113850363 113850400 -6433912 - RCHARR1 DNA MER1_type -9 965 927 7 1453 1426 76 5 5 chr13 113850400 113850586 -6433726 - B2_Mm2 SINE B2 -9 186 1 7 1453 3467 244 17 36 chr13 113850586 113851479 -6432833 - RCHARR1 DNA MER1_type -48 926 53 7 1453 1166 176 18 0 chr13 113851509 113851731 -6432581 + URR1A DNA MER1_type 1 226 0 7 1453 324 297 118 37 chr13 113852776 113852937 -6431375 + MER20 DNA MER1_type 8 181 -38 7 1453 3302 180 108 9 chr13 113853038 113853212 -6431100 - RLTR40 LTR ERVK -11 806 627 7 1453 387 41 0 0 chr13 113853212 113853261 -6431051 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 7 1453 3302 180 108 9 chr13 113853261 113853542 -6430770 - RLTR40 LTR ERVK -191 626 285 7 1453 414 0 0 0 chr13 113853542 113853588 -6430724 + (CA)n Simple_repeat Simple_repeat 2 47 0 7 1453 3302 180 108 9 chr13 113853588 113853865 -6430447 - RLTR40 LTR ERVK -533 284 3 7 1453 385 266 134 13 chr13 113855224 113855456 -6428856 - HAL1 LINE L1 -860 1647 1388 7 1453 4888 159 39 10 chr13 113855508 113856460 -6427852 + RMER12 LTR ERVK 1 971 -351 7 1453 249 33 0 0 chr13 113856460 113856490 -6427822 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1453 4888 159 39 10 chr13 113856490 113856548 -6427764 + RMER12 LTR ERVK 972 1039 -283 7 1453 493 208 79 8 chr13 113856829 113856955 -6427357 - B1F SINE Alu -6 143 9 7 1453 475 230 35 69 chr13 113856955 113856974 -6427338 - ID_B1 SINE B4 -6 218 79 7 1453 3127 40 3 0 chr13 113856996 113857372 -6426940 - L1Md_F2 LINE L1 0 6582 6206 7 1453 915 147 11 6 chr13 113857493 113857671 -6426641 + CT-rich Low_complexity Low_complexity 1 179 0 7 1453 915 146 0 27 chr13 113857696 113857844 -6426468 - B1_Mus1 SINE Alu -1 147 4 7 1453 1072 82 23 23 chr13 113858175 113858350 -6425962 + B2_Mm1t SINE B2 11 185 -8 7 1453 450 0 0 0 chr13 113858429 113858479 -6425833 + (GA)n Simple_repeat Simple_repeat 1 50 0 7 1453 508 300 8 8 chr13 113859090 113859221 -6425091 - RSINE1 SINE B4 -30 135 5 7 1453 1780 290 95 49 chr13 113859224 113859993 -6424319 - L1MC LINE L1 -853 5293 4469 7 1453 5897 62 0 3 chr13 113859993 113860724 -6423588 - L1Md_F2 LINE L1 -13 6569 5841 7 1453 1780 290 95 49 chr13 113860724 113860746 -6423566 - L1MC LINE L1 -1678 4468 4457 7 1453 1127 63 157 0 chr13 113860746 113860905 -6423407 - B2_Mm2 SINE B2 -9 186 3 7 1453 1780 290 95 49 chr13 113860905 113861113 -6423199 - L1MC LINE L1 -1690 4456 4248 7 1453 182 37 37 0 chr13 113861120 113861147 -6423165 + (TG)n Simple_repeat Simple_repeat 1 28 0 7 1453 269 303 30 0 chr13 113861150 113861216 -6423096 - ID SINE ID -151 73 6 7 1453 3277 118 100 8 chr13 113863358 113864154 -6420158 - L1_Mur2 LINE L1 -4117 1760 889 7 1453 525 306 79 34 chr13 113864997 113865264 -6419048 + B4A SINE B4 2 280 -12 7 1453 324 0 0 0 chr13 113865316 113865352 -6418960 + (CA)n Simple_repeat Simple_repeat 1 36 0 7 1453 519 141 0 39 chr13 113865445 113865548 -6418764 - L1Md_F2 LINE L1 -1 6581 6483 7 1453 331 323 135 16 chr13 113865582 113865774 -6418538 - MT2A LTR ERVL -1 532 318 7 1453 307 308 50 25 chr13 113865882 113866002 -6418310 - MTEa LTR MaLR -238 141 19 7 1453 357 270 30 0 chr13 113866074 113866174 -6418138 - L1MEf LINE L1 -4742 1458 1356 7 1453 259 246 45 15 chr13 113866204 113866270 -6418042 - L1MEf LINE L1 -5096 1104 1037 7 1453 361 319 14 7 chr13 113866573 113866715 -6417597 - L1MEf LINE L1 -5651 549 407 7 1453 200 167 0 0 chr13 113866840 113866870 -6417442 + polypyrimidine Low_complexity Low_complexity 3 32 0 7 1453 1142 95 0 0 chr13 113866871 113867018 -6417294 - B1_Mus2 SINE Alu 0 147 1 7 1453 514 303 46 37 chr13 113867140 113867356 -6416956 - L1MEf LINE L1 -5976 224 7 7 1453 676 239 46 69 chr13 113867470 113867645 -6416667 + B3A SINE B2 1 171 -27 7 1453 597 259 119 11 chr13 113867676 113867852 -6416460 + B3 SINE B2 9 203 -13 7 1453 504 29 0 0 chr13 113867983 113868051 -6416261 + RLTR12B LTR ERVK 1 68 -460 7 1453 1676 153 12 22 chr13 113868071 113868391 -6415921 + RLTR12B LTR ERVK 212 528 0 7 1453 240 306 18 36 chr13 113869787 113869899 -6414413 + MER5B DNA MER1_type 2 111 -67 7 1453 221 159 0 0 chr13 113870247 113870291 -6414021 + (CACCAT)n Simple_repeat Simple_repeat 2 45 0 7 1453 202 200 25 0 chr13 113870449 113870489 -6413823 + CT-rich Low_complexity Low_complexity 3 43 0 7 1453 608 70 0 11 chr13 113870492 113870579 -6413733 + (TTTTC)n Simple_repeat Simple_repeat 2 87 0 7 1453 708 182 0 0 chr13 113870564 113870701 -6413611 + CT-rich Low_complexity Low_complexity 1 137 0 7 1453 722 139 66 0 chr13 113870701 113870838 -6413474 - B1_Mus1 SINE Alu -1 147 2 7 1453 450 191 22 0 chr13 113870958 113871047 -6413265 - PB1D9 SINE Alu -27 93 3 7 1453 280 289 33 0 chr13 113871528 113871618 -6412694 + B1F SINE Alu 52 144 -5 7 1453 285 29 0 0 chr13 113871700 113871734 -6412578 + (CA)n Simple_repeat Simple_repeat 2 35 0 7 1453 650 272 54 27 chr13 113871815 113871983 -6412329 + B3 SINE B2 23 200 -16 7 1453 216 0 0 0 chr13 113871983 113872007 -6412305 + (TAAAA)n Simple_repeat Simple_repeat 5 28 0 7 1453 650 272 54 27 chr13 113872007 113872023 -6412289 + B3 SINE B2 201 212 -4 7 1453 25 0 0 0 chr13 113872270 113872295 -6412017 + AT_rich Low_complexity Low_complexity 1 25 0 8 1453 500 232 168 0 chr13 113872548 113872703 -6411609 + B3A SINE B2 1 181 -17 8 1453 639 103 0 0 chr13 113873753 113873850 -6410462 + (TCCC)n Simple_repeat Simple_repeat 4 100 0 8 1453 207 0 0 0 chr13 113874626 113874649 -6409663 + (TA)n Simple_repeat Simple_repeat 1 23 0 8 1453 243 0 0 0 chr13 113874649 113874676 -6409636 + (TTAG)n Simple_repeat Simple_repeat 1 27 0 8 1453 317 188 12 0 chr13 113874820 113874900 -6409412 + CT-rich Low_complexity Low_complexity 4 84 0 8 1453 526 336 49 87 chr13 113875671 113875801 -6408511 - Lx8 LINE L1 -2 7471 7359 8 1453 285 29 0 0 chr13 113875801 113875835 -6408477 + (TG)n Simple_repeat Simple_repeat 2 35 0 8 1453 303 28 0 0 chr13 113875839 113875875 -6408437 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 8 1453 278 204 125 31 chr13 113875878 113875974 -6408338 - PB1D9 SINE Alu -13 107 3 8 1453 526 336 49 87 chr13 113875974 113875986 -6408326 - Lx8 LINE L1 -115 7358 7355 8 1453 983 180 113 0 chr13 113875986 113876180 -6408132 - B3 SINE B2 0 216 1 8 1453 526 336 49 87 chr13 113876180 113876520 -6407792 - Lx8 LINE L1 -119 7354 7000 8 1453 638 41 0 39 chr13 113876574 113876676 -6407636 + (CCAA)n Simple_repeat Simple_repeat 1 98 0 8 1453 1734 121 49 14 chr13 113877049 113877208 -6407104 + Lx LINE L1 6361 6533 -121 8 1453 180 0 0 0 chr13 113877208 113877228 -6407084 + (TGGG)n Simple_repeat Simple_repeat 1 20 0 8 1453 1734 121 49 14 chr13 113877228 113877352 -6406960 + Lx LINE L1 6534 6653 -1 8 1453 187 31 30 30 chr13 113877399 113877432 -6406880 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 8 1453 622 234 280 30 chr13 113877442 113877838 -6406474 + Lx8 LINE L1 6976 7470 -3 8 1453 329 295 0 21 chr13 113878819 113878916 -6405396 + CT-rich Low_complexity Low_complexity 2 96 0 8 1453 221 263 18 0 chr13 113878916 113878973 -6405339 - ID SINE ID -141 83 26 8 1453 849 251 0 60 chr13 113879180 113879379 -6404933 - B3A SINE B2 -7 191 5 8 1453 329 223 45 23 chr13 113879402 113879535 -6404777 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 8 1453 205 337 29 19 chr13 113879568 113879671 -6404641 + MIRc SINE MIR 49 152 -116 8 1453 307 241 24 0 chr13 113880980 113881063 -6403249 + G-rich Low_complexity Low_complexity 5 89 0 8 1453 195 275 18 9 chr13 113881513 113881623 -6402689 + CT-rich Low_complexity Low_complexity 2 112 0 8 1453 332 357 18 0 chr13 113881626 113881738 -6402574 - ID_B1 SINE B4 -31 193 80 8 1453 181 77 0 71 chr13 113881951 113881993 -6402319 + (TCTCTG)n Simple_repeat Simple_repeat 2 40 0 8 1453 582 41 0 0 chr13 113881996 113882069 -6402243 + (CA)n Simple_repeat Simple_repeat 2 74 0 8 1453 285 294 132 23 chr13 113882426 113882555 -6401757 - L1ME3 LINE L1 -115 6047 5905 8 1453 1098 232 200 88 chr13 113882667 113883192 -6401120 + RMER4B LTR ERVK 1 584 -1 8 1453 329 340 26 21 chr13 113883224 113883413 -6400899 - L1ME3 LINE L1 -461 5712 5523 8 1453 223 174 0 21 chr13 113884899 113884946 -6399366 + G-rich Low_complexity Low_complexity 5 50 0 8 1453 210 192 0 0 chr13 113885468 113885520 -6398792 + (TA)n Simple_repeat Simple_repeat 2 53 0 8 1453 23 54 0 0 chr13 113885521 113885558 -6398754 + AT_rich Low_complexity Low_complexity 1 37 0 8 1453 587 231 0 17 chr13 113885680 113885799 -6398513 + PB1D9 SINE Alu 2 118 -2 8 1453 228 170 21 0 chr13 113885800 113885847 -6398465 + (CCAA)n Simple_repeat Simple_repeat 1 48 0 8 1453 236 333 0 41 chr13 113887044 113887141 -6397171 - MLT1A1 LTR MaLR -315 93 1 8 1453 247 320 95 8 chr13 113887613 113887739 -6396573 + MER3 DNA MER1_type 29 165 -44 8 1453 396 0 0 0 chr13 113888177 113888221 -6396091 + (TG)n Simple_repeat Simple_repeat 2 45 0 8 1453 863 281 134 0 chr13 113891540 113891793 -6392519 + B4A SINE B4 4 290 -2 8 1453 243 0 0 0 chr13 113891809 113891836 -6392476 + (TC)n Simple_repeat Simple_repeat 1 27 0 8 1453 41 36 0 0 chr13 113892535 113892590 -6391722 + AT_rich Low_complexity Low_complexity 1 55 0 8 1453 9718 72 55 19 chr13 113892590 113893523 -6390789 - Lx3_Mus LINE L1 0 7009 6062 8 1453 545 14 0 40 chr13 113893523 113893598 -6390714 + (TCCC)n Simple_repeat Simple_repeat 1 72 0 8 1453 9718 65 34 6 chr13 113893598 113894484 -6389828 - Lx3_Mus LINE L1 -948 6061 5144 8 1453 1319 290 109 57 chr13 113894491 113895597 -6388715 - L1MB7 LINE L1 -16 6168 4995 8 1453 282 245 250 56 chr13 113895597 113895757 -6388555 - B3A SINE B2 -6 192 2 8 1453 793 307 42 77 chr13 113895757 113895992 -6388320 - L1MB7 LINE L1 -1152 4994 4758 8 1453 1146 47 0 0 chr13 113895992 113896141 -6388171 + (CA)n Simple_repeat Simple_repeat 2 150 0 8 1453 490 332 28 38 chr13 113896145 113896433 -6387879 - B4A SINE B4 -4 288 4 8 1453 388 301 71 52 chr13 113896434 113896644 -6387668 + Charlie1a DNA MER1_type 70 283 -1172 8 1453 444 327 101 12 chr13 113896742 113896999 -6387313 + Charlie1a DNA MER1_type 571 850 -605 8 1453 1871 194 45 39 chr13 113897114 113897576 -6386736 + RLTR20B3 LTR ERVK 100 564 -13 8 1453 249 161 17 35 chr13 113897640 113897698 -6386614 + B1_Mus1 SINE Alu 4 60 -88 8 1453 449 178 0 45 chr13 113897743 113897855 -6386457 + B1_Mus2 SINE Alu 41 147 0 8 1453 387 0 0 0 chr13 113897954 113897997 -6386315 + (CA)n Simple_repeat Simple_repeat 2 44 0 8 1453 873 172 100 0 chr13 113898890 113899070 -6385242 + RMER19B LTR ERVK 705 902 0 8 1453 9046 157 14 6 chr13 113899071 113900658 -6383654 - L1_Mur3 LINE L1 -288 5592 3992 8 181 15308 54 10 1 chr13 113900961 113903573 -6380739 - L1Md_F2 LINE L1 0 6582 3948 8 1454 5922 53 18 0 chr13 113903573 113904362 -6379950 - RLTR13B4 LTR ERVK 0 803 1 8 1454 21641 68 1 9 chr13 113904362 113907734 -6376578 - L1Md_F2 LINE L1 -1930 3953 615 8 1454 181 390 21 0 chr13 113907866 113907961 -6376351 - L2c LINE L2 -5 3382 3286 8 1454 594 302 100 11 chr13 113908340 113908621 -6375691 + L1MB7 LINE L1 5459 5764 -420 8 1454 2946 235 159 7 chr13 113908935 113909817 -6374495 + RMER1A Other Other 1 1016 -14 8 1454 625 268 79 20 chr13 113909808 113910020 -6374292 + L1MB7 LINE L1 5814 6043 -141 8 1454 697 216 194 31 chr13 113910024 113910215 -6374097 + URR1A DNA MER1_type 5 226 0 8 1454 261 296 108 31 chr13 113911188 113911383 -6372929 + L2a LINE L2 1984 2193 -1226 8 1454 197 289 39 0 chr13 113911390 113911442 -6372870 + L2a LINE L2 3294 3347 -79 8 1454 372 70 32 88 chr13 113912067 113912192 -6372120 + CT-rich Low_complexity Low_complexity 4 121 0 8 1454 689 312 80 28 chr13 113912567 113912930 -6371382 - MLT1B LTR MaLR -4 386 5 8 1454 1084 205 5 5 chr13 113913033 113913249 -6371063 - RLTR18B LTR ERVK -6 506 291 8 1454 469 275 33 0 chr13 113913283 113913403 -6370909 - RLTR18B LTR ERVK -216 296 173 8 1454 667 0 24 0 chr13 113914332 113914415 -6369897 + (TTTTC)n Simple_repeat Simple_repeat 2 86 0 8 1454 669 168 177 70 chr13 113915102 113915288 -6369024 - B3 SINE B2 -3 213 8 8 1454 2113 144 19 47 chr13 113915868 113916290 -6368022 + RMER17C LTR ERVK 1 410 0 8 1454 231 114 0 0 chr13 113917120 113917155 -6367157 + (TG)n Simple_repeat Simple_repeat 2 36 0 8 1454 479 0 14 40 chr13 113917406 113917480 -6366832 + (TTTA)n Simple_repeat Simple_repeat 2 73 0 8 1454 690 267 26 11 chr13 113918132 113918321 -6365991 + L1M1 LINE L1 5497 5688 -612 8 1454 628 224 72 6 chr13 113918322 113918509 -6365803 + B3A SINE B2 1 197 -19 8 1454 291 270 26 0 chr13 113918514 113918602 -6365710 + L1M1 LINE L1 5667 5757 -432 8 1454 969 137 229 0 chr13 113918717 113918900 -6365412 + URR1B DNA MER1_type 1 225 0 8 1454 3201 63 2 12 chr13 113919172 113919576 -6364736 - MTB LTR MaLR 0 400 1 8 1454 2585 110 29 8 chr13 113919779 113920165 -6364147 + ORR1B1 LTR MaLR 1 394 0 8 1454 232 389 118 35 chr13 113920340 113920484 -6363828 + LTR16E2 LTR ERVL 43 198 -370 8 1454 424 265 102 8 chr13 113920634 113920752 -6363560 + RSINE1 SINE B4 8 136 -29 8 1454 408 20 0 0 chr13 113920759 113920808 -6363504 + (CA)n Simple_repeat Simple_repeat 1 49 0 8 1454 24 67 0 0 chr13 113920891 113920936 -6363376 + AT_rich Low_complexity Low_complexity 1 45 0 8 1454 751 200 7 0 chr13 113921057 113921197 -6363115 + B1_Mur1 SINE Alu 3 143 -6 8 1454 1759 307 99 29 chr13 113921289 113922090 -6362222 - Lx8 LINE L1 -35 7438 6582 8 1454 982 278 90 3 chr13 113922071 113922360 -6361952 + Lx7 LINE L1 5450 5763 -117 8 1454 1253 165 51 4 chr13 113922648 113922904 -6361408 - ORR1D1 LTR MaLR 0 374 107 8 1454 901 212 51 99 chr13 113922898 113923212 -6361100 - RLTR20B3 LTR ERVK -256 321 23 8 1454 22 35 0 0 chr13 113923390 113923419 -6360893 + AT_rich Low_complexity Low_complexity 1 29 0 8 1454 208 189 19 19 chr13 113923817 113923871 -6360441 + A-rich Low_complexity Low_complexity 1 54 0 8 1454 845 321 16 33 chr13 113923925 113924231 -6360081 + Lx7 LINE L1 6228 6528 -1168 8 1454 643 296 174 9 chr13 113925483 113925952 -6358360 - L1MB4 LINE L1 -28 6152 5615 8 1454 237 297 117 0 chr13 113925985 113926113 -6358199 + L2 LINE L2 716 858 -2561 8 1454 256 316 20 0 chr13 113926142 113926240 -6358072 + L2 LINE L2 1903 2002 -1417 8 1454 975 91 7 0 chr13 113926250 113926393 -6357919 + ORR1A2 LTR MaLR 1 144 -183 8 1454 1404 54 5 0 chr13 113927746 113927931 -6356381 - L1Md_F2 LINE L1 0 6582 6397 8 1454 276 190 0 65 chr13 113928355 113928417 -6355895 - URR1B DNA MER1_type 0 225 168 8 1454 1137 178 10 5 chr13 113928466 113928675 -6355637 - URR1B DNA MER1_type -15 210 1 8 1454 991 276 96 27 chr13 113928697 113929147 -6355165 + MLT-int LTR MaLR 117 597 -1138 8 1454 1133 196 129 30 chr13 113929383 113929756 -6354556 + RMER17C LTR ERVK 1 410 0 8 1454 23 0 0 0 chr13 113929951 113929974 -6354338 + AT_rich Low_complexity Low_complexity 1 23 0 8 1454 26 0 0 0 chr13 113930589 113930615 -6353697 + AT_rich Low_complexity Low_complexity 1 26 0 8 1454 261 0 0 0 chr13 113930637 113930666 -6353646 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 8 1454 1045 89 7 0 chr13 113930668 113930803 -6353509 - B1_Mus1 SINE Alu -12 136 1 8 1454 505 228 207 7 chr13 113930808 113930958 -6353354 - B3A SINE B2 -18 180 1 8 1454 518 237 7 22 chr13 113930968 113931106 -6353206 + Lx5 LINE L1 6914 7049 -1 8 1454 2322 38 66 0 chr13 113931129 113931446 -6352866 - ORR1A1 LTR MaLR -8 338 1 8 1454 982 16 0 0 chr13 113931450 113931571 -6352741 + B1_Mus1 SINE Alu 26 146 -2 8 1454 550 304 0 20 chr13 113931590 113931741 -6352571 + ID_B1 SINE B4 69 216 -8 8 1454 394 18 36 0 chr13 113932511 113932566 -6351746 + (TG)n Simple_repeat Simple_repeat 2 58 0 8 1454 336 347 0 10 chr13 113932587 113932683 -6351629 - B4A SINE B4 -20 272 178 9 1454 298 235 11 34 chr13 113932729 113932742 -6351570 - B3 SINE B2 -128 88 3 9 1454 371 200 13 0 chr13 113932742 113932817 -6351495 - B4A SINE B4 -214 78 3 9 1454 5136 38 10 11 chr13 113933067 113933729 -6350583 - L1Md_F2 LINE L1 0 6582 5964 9 1454 281 114 0 0 chr13 113933871 113933915 -6350397 + ETnERV2-int LTR ERVK 7363 7406 0 9 1454 864 235 50 136 chr13 113933918 113934337 -6349975 + RLTR9C LTR ERVK 11 393 0 9 1454 544 276 68 10 chr13 113934340 113934545 -6349767 - MER44A DNA MER2_type -104 235 19 9 1454 4102 81 20 7 chr13 113934557 113935117 -6349195 + RMER2 LTR ERV1 1 567 0 9 1454 241 238 28 113 chr13 113935550 113935692 -6348620 + MT2A LTR ERVL 1 130 -403 9 1454 1070 254 25 47 chr13 113935626 113935944 -6348368 + MTE2b LTR MaLR 69 379 0 9 1454 180 0 0 0 chr13 113936013 113936033 -6348279 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 9 1454 1329 168 36 72 chr13 113937996 113938330 -6345982 + RLTRETN_Mm LTR ERVK 1 322 0 9 1454 215 245 0 0 chr13 113938575 113938628 -6345684 + T-rich Low_complexity Low_complexity 1 53 0 9 1454 198 174 0 0 chr13 113938834 113938880 -6345432 + T-rich Low_complexity Low_complexity 1 46 0 9 1454 4244 35 0 0 chr13 113938884 113939372 -6344940 - L1Md_T LINE L1 0 6582 6095 9 1454 4045 22 0 0 chr13 113939374 113939833 -6344479 + L1Md_A LINE L1 5614 6072 -510 9 1454 538 133 13 147 chr13 113939978 113940128 -6344184 - RLTR28 LTR ERVL -58 466 337 9 1454 556 258 55 18 chr13 113940592 113940809 -6343503 + MER63D DNA AcHobo 1 225 -836 9 1454 1533 68 16 0 chr13 113941387 113941579 -6342733 - B2_Mm2 SINE B2 0 195 1 9 1454 239 319 128 0 chr13 113941702 113941796 -6342516 + MER63D DNA AcHobo 210 315 -746 9 1454 36 0 0 0 chr13 113942770 113942806 -6341506 + AT_rich Low_complexity Low_complexity 1 36 0 9 1454 1078 224 61 57 chr13 113943234 113943513 -6340799 + MTEa LTR MaLR 3 282 -97 9 1454 342 0 0 0 chr13 113943516 113943554 -6340758 + (CA)n Simple_repeat Simple_repeat 2 39 0 9 1454 430 201 340 29 chr13 113943556 113943865 -6340447 + L1MDa LINE L1 1720 2124 -4509 9 1454 1094 64 0 0 chr13 113944553 113944693 -6339619 + L1_Mus1 LINE L1 6428 6567 0 9 1454 449 249 77 91 chr13 113944817 113944860 -6339452 - L1MB1 LINE L1 -4 6164 6135 9 1454 1441 94 0 0 chr13 113944860 113945052 -6339260 - B2_Mm2 SINE B2 -2 193 2 9 1454 449 249 77 91 chr13 113945052 113945216 -6339096 - L1MB1 LINE L1 -34 6134 5960 9 1454 180 152 0 0 chr13 113945751 113945784 -6338528 + C-rich Low_complexity Low_complexity 1 33 0 9 1454 216 254 0 17 chr13 113946020 113946080 -6338232 + CT-rich Low_complexity Low_complexity 4 62 0 9 1454 367 228 103 45 chr13 113946530 113946686 -6337626 + L1MDa LINE L1 115 279 -6354 9 1454 261 118 0 0 chr13 113946706 113946757 -6337555 + (A)n Simple_repeat Simple_repeat 1 51 0 9 1454 302 250 109 10 chr13 113946758 113946859 -6337453 + L1MDa LINE L1 276 386 -6247 9 1454 315 0 0 0 chr13 113946864 113946899 -6337413 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 9 1454 340 262 155 0 chr13 113947380 113947464 -6336848 + PB1D7 SINE Alu 6 102 -18 9 1454 429 20 0 0 chr13 113947471 113947521 -6336791 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 9 1454 344 336 18 73 chr13 113947556 113947720 -6336592 - L2b LINE L2 0 3375 3221 9 1454 259 299 0 0 chr13 113948433 113948500 -6335812 - L2b LINE L2 -5 3370 3304 9 1454 323 284 66 15 chr13 113948601 113948737 -6335575 + L1MC LINE L1 5694 5836 -2046 9 1454 556 274 128 8 chr13 113948768 113949025 -6335287 + B4A SINE B4 1 288 -4 9 1454 26 0 0 0 chr13 113949147 113949173 -6335139 + AT_rich Low_complexity Low_complexity 1 26 0 9 1454 1239 199 184 0 chr13 113949211 113949483 -6334829 - Lx8 LINE L1 -164 7309 6988 9 1454 807 256 26 5 chr13 113949646 113949838 -6334474 - B3 SINE B2 -20 196 1 9 1454 236 333 9 66 chr13 113950622 113950728 -6333584 + PB1D10 SINE Alu 5 104 -13 9 1454 189 74 0 0 chr13 113950730 113950757 -6333555 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1454 242 370 65 22 chr13 113951396 113951581 -6332731 - MIR3 SINE MIR -7 201 9 9 1454 393 123 0 0 chr13 113952387 113952452 -6331860 + (CCCCAA)n Simple_repeat Simple_repeat 5 69 0 9 1454 319 311 88 7 chr13 113952467 113952603 -6331709 + MIR SINE MIR 24 170 -92 9 1454 226 348 71 9 chr13 113952965 113953078 -6331234 + LTR16E1 LTR ERVL 418 537 -1 9 1454 911 265 37 58 chr13 113953810 113954138 -6330174 + MTE2b LTR MaLR 1 321 -58 9 1454 338 281 0 12 chr13 113954434 113954517 -6329795 + PB1D10 SINE Alu 28 109 -8 9 1454 250 214 0 0 chr13 113954528 113954570 -6329742 + ID4_ SINE ID 3 44 -39 9 1454 210 271 0 0 chr13 113954757 113954816 -6329496 - L2a LINE L2 -55 3371 3313 9 1454 21 0 0 0 chr13 113956122 113956143 -6328169 + AT_rich Low_complexity Low_complexity 1 21 0 9 1454 199 258 94 31 chr13 113956159 113956255 -6328057 + L2b LINE L2 3272 3373 -2 9 1454 771 191 124 0 chr13 113956645 113956823 -6327489 - B3 SINE B2 -1 215 16 9 1454 367 203 24 48 chr13 113957144 113957227 -6327085 - Tigger7 DNA MER2_type -2 2489 2409 9 1454 1021 282 145 27 chr13 113957226 113957750 -6326562 - Tigger7 DNA MER2_type -1884 607 22 9 1454 198 0 0 0 chr13 113958109 113958131 -6326181 + (TTG)n Simple_repeat Simple_repeat 3 24 0 9 1454 317 298 62 34 chr13 113958475 113958621 -6325691 + RSINE1 SINE B4 1 150 -15 9 1454 2617 169 451 14 chr13 113959332 113960042 -6324270 + RMER1B Other Other 2 1033 -33 9 1454 532 0 14 14 chr13 113960042 113960111 -6324201 + (CA)n Simple_repeat Simple_repeat 1 69 0 9 1454 2617 161 323 15 chr13 113960111 113960135 -6324177 + RMER1B Other Other 1034 1055 -11 9 1454 256 301 0 24 chr13 113960368 113960453 -6323859 + B3A SINE B2 46 128 -70 9 1454 427 266 18 0 chr13 113961003 113961116 -6323196 + RMER5 LTR ERV1 1 115 -419 9 1454 304 268 43 26 chr13 113961196 113961311 -6323001 - PB1D10 SINE Alu 0 117 1 9 1454 351 239 36 18 chr13 113961532 113961643 -6322669 + L1MB1 LINE L1 6015 6127 -41 9 1454 819 57 0 0 chr13 113962327 113962432 -6321880 + (TTAGGG)n Simple_repeat Simple_repeat 5 109 0 9 1454 225 0 0 0 chr13 113962439 113962464 -6321848 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 9 1454 278 250 0 0 chr13 113964733 113964789 -6319523 + ID4_ SINE ID 8 63 -20 9 1454 359 89 18 0 chr13 113964790 113964846 -6319466 + (CA)n Simple_repeat Simple_repeat 2 58 0 9 1454 749 82 9 0 chr13 113965683 113965793 -6318519 + (TC)n Simple_repeat Simple_repeat 2 112 0 9 1454 768 145 47 74 chr13 113965819 113965841 -6318471 - B1_Mur4 SINE Alu -1 149 129 9 1454 356 0 23 0 chr13 113965841 113965885 -6318427 + (TTTTG)n Simple_repeat Simple_repeat 1 45 0 9 1454 768 145 47 74 chr13 113965885 113966011 -6318301 - B1_Mur4 SINE Alu -22 128 5 9 1454 243 0 0 0 chr13 113966031 113966058 -6318254 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 9 1454 288 0 0 0 chr13 113966068 113966100 -6318212 + (CA)n Simple_repeat Simple_repeat 2 33 0 9 1454 256 264 0 0 chr13 113966100 113966153 -6318159 - RSINE1 SINE B4 -21 144 92 9 1454 387 0 0 0 chr13 113966603 113966646 -6317666 + (TCCC)n Simple_repeat Simple_repeat 3 45 0 9 1454 1791 161 38 87 chr13 113967031 113967480 -6316832 + RLTR31A_Mm LTR ERVK 1 427 -157 9 1454 3561 43 31 0 chr13 113967480 113967903 -6316409 - RLTR10C LTR ERVK 0 436 1 9 1454 277 264 0 41 chr13 113968012 113968112 -6316200 + ID4 SINE ID 5 93 -59 9 1454 265 236 110 13 chr13 113968294 113968385 -6315927 - PB1D10 SINE Alu -1 116 29 9 1454 540 0 0 0 chr13 113968419 113968479 -6315833 + (GA)n Simple_repeat Simple_repeat 1 60 0 9 1454 296 358 24 12 chr13 113968582 113968749 -6315563 + MER121 Unknown Unknown 55 223 -189 9 1454 333 185 0 0 chr13 113968799 113968864 -6315448 + CT-rich Low_complexity Low_complexity 1 65 0 9 1454 25 0 0 0 chr13 113968870 113968895 -6315417 + AT_rich Low_complexity Low_complexity 1 25 0 9 1454 396 0 0 0 chr13 113969416 113969460 -6314852 + (TG)n Simple_repeat Simple_repeat 1 44 0 9 1454 527 211 77 0 chr13 113969483 113969587 -6314725 - B1_Mur1 SINE Alu -34 115 4 9 1454 270 218 52 94 chr13 113969506 113969602 -6314710 - MT2B LTR ERVL -361 240 149 9 1454 956 196 58 19 chr13 113969603 113969811 -6314501 - B3 SINE B2 0 216 1 9 1454 408 272 67 17 chr13 113970378 113970589 -6313723 + MER44B DNA MER2_type 1 232 -107 9 1454 820 142 199 0 chr13 113971373 113971549 -6312763 + URR1A DNA MER1_type 1 211 -15 9 1454 180 0 0 0 chr13 113972165 113972185 -6312127 + (CAA)n Simple_repeat Simple_repeat 2 21 0 9 1454 193 310 212 17 chr13 113973034 113973152 -6311160 - MIRb SINE MIR -121 147 7 9 1454 361 280 74 83 chr13 113973839 113974069 -6310243 + MER5C DNA MER1_type 47 274 -39 9 1454 746 226 10 58 chr13 113974218 113974425 -6309887 - B3A SINE B2 0 198 2 9 1454 646 230 60 13 chr13 113974464 113974614 -6309698 - RSINE1 SINE B4 0 165 9 9 1454 290 26 0 25 chr13 113975013 113975053 -6309259 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 9 1454 586 138 0 18 chr13 113975950 113976036 -6308276 + polypyrimidine Low_complexity Low_complexity 25 109 0 9 1454 1396 34 11 0 chr13 113976036 113976214 -6308098 + (TTC)n Simple_repeat Simple_repeat 1 180 0 9 1454 586 138 0 18 chr13 113976214 113976238 -6308074 + polypyrimidine Low_complexity Low_complexity 1 24 0 9 1454 1304 63 0 6 chr13 113976242 113976418 -6307894 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 9 1454 895 254 73 43 chr13 113976418 113976718 -6307594 + Lx9 LINE L1 7002 7310 -334 9 1454 519 17 0 0 chr13 113976759 113976819 -6307493 + (GA)n Simple_repeat Simple_repeat 1 60 0 9 1454 350 165 57 28 chr13 113976819 113976918 -6307394 - RLTR43A LTR ERVK -61 303 202 9 1454 2134 155 0 0 chr13 113977086 113977403 -6306909 + Lx5 LINE L1 6358 6674 -376 9 1454 208 203 0 68 chr13 113977406 113977480 -6306832 + G-rich Low_complexity Low_complexity 1 69 0 1 1454 352 175 28 28 chr13 113977483 113977589 -6306723 + Lx5 LINE L1 6942 7047 -3 9 1454 5134 152 34 15 chr13 113977938 113978536 -6305776 + RMER17B LTR ERVK 1 616 -342 1 1454 4230 164 123 76 chr13 113978536 113979513 -6304799 - RLTR13D2 LTR ERVK 0 1023 1 1 1454 5134 152 34 15 chr13 113979513 113979854 -6304458 + RMER17B LTR ERVK 617 958 0 1 1454 21 0 0 0 chr13 113979923 113979944 -6304368 + AT_rich Low_complexity Low_complexity 1 21 0 1 1454 740 247 20 40 chr13 113980641 113980839 -6303473 + B3A SINE B2 3 196 -2 1 1454 1192 56 6 0 chr13 113980949 113981111 -6303201 - B2_Mm2 SINE B2 -31 164 2 1 1454 1344 234 86 14 chr13 113981111 113981540 -6302772 - RCHARR1 DNA MER1_type -107 867 408 1 1454 581 203 8 0 chr13 113981552 113981670 -6302642 - MT2A LTR ERVL -114 419 301 1 1454 280 301 19 28 chr13 113981668 113981774 -6302538 + RCHARR1 DNA MER1_type 100 204 -770 1 1454 402 240 89 16 chr13 113981798 113981921 -6302391 + RCHARR1 DNA MER1_type 265 396 -578 1 1454 239 224 194 0 chr13 113981932 113981999 -6302313 - MT2A LTR ERVL -453 80 1 1 1454 1282 219 59 67 chr13 113982219 113982578 -6301734 - MTD LTR MaLR 0 419 70 1 1454 378 0 0 0 chr13 113982578 113982620 -6301692 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 1 1454 1282 219 59 67 chr13 113982620 113982665 -6301647 - MTD LTR MaLR -350 69 18 1 1454 462 342 56 44 chr13 113982922 113983264 -6301048 - MTE-int LTR MaLR -955 625 280 1 1454 342 0 0 0 chr13 113983952 113983990 -6300322 + (TTAA)n Simple_repeat Simple_repeat 1 38 0 1 1454 225 196 0 0 chr13 113984636 113984682 -6299630 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1454 311 323 113 29 chr13 113986162 113986323 -6297989 - LTR33 LTR ERVL -332 188 23 1 1454 213 162 0 0 chr13 113988050 113988093 -6296219 - MIR SINE MIR -7 255 217 1 1454 343 202 161 0 chr13 113988770 113988894 -6295418 + MLT1B LTR MaLR 241 384 -6 1 1454 210 224 0 0 chr13 113989138 113989187 -6295125 + (CCAA)n Simple_repeat Simple_repeat 3 51 0 1 1454 4801 177 62 32 chr13 113989546 113990578 -6293734 - Lx5 LINE L1 -35 7015 5953 1 1454 367 311 29 29 chr13 113991172 113991311 -6293001 + LTR90A LTR LTR 100 238 -738 1 1454 210 37 0 0 chr13 113991432 113991459 -6292853 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1 1454 204 158 0 0 chr13 113992183 113992221 -6292091 + T-rich Low_complexity Low_complexity 1 38 0 1 1454 471 312 175 5 chr13 113992450 113992650 -6291662 + LTR90A LTR LTR 721 954 -22 1 1454 233 294 41 151 chr13 113993484 113993656 -6290656 + MTEb LTR MaLR 197 349 -30 1 1454 309 51 0 0 chr13 113993688 113993727 -6290585 + (GAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1454 582 304 30 4 chr13 113994395 113994648 -6289664 + B4A SINE B4 2 288 -4 1 1454 378 323 22 17 chr13 113996509 113996718 -6287594 + MIRb SINE MIR 58 262 0 1 1454 2156 147 73 3 chr13 113996906 113997274 -6287038 - ORR1B1 LTR MaLR 0 394 1 1 1454 191 362 9 19 chr13 113997282 113997389 -6286923 + MIR SINE MIR 93 198 -64 1 1454 1726 266 62 54 chr13 113997556 113998167 -6286145 + Lx8 LINE L1 6809 7424 -49 1 1454 387 0 0 0 chr13 113999189 113999232 -6285080 + (TC)n Simple_repeat Simple_repeat 2 44 0 1 1454 483 63 0 0 chr13 113999479 113999542 -6284770 + (TTA)n Simple_repeat Simple_repeat 2 64 0 1 1454 26 30 0 0 chr13 114001117 114001150 -6283162 + AT_rich Low_complexity Low_complexity 1 33 0 1 1454 198 0 0 0 chr13 114001218 114001240 -6283072 + (A)n Simple_repeat Simple_repeat 1 22 0 2 1454 243 0 0 0 chr13 114001504 114001531 -6282781 + (T)n Simple_repeat Simple_repeat 1 27 0 3 1454 234 0 0 0 chr13 114002052 114002078 -6282234 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 4 1454 570 184 9 0 chr13 114002324 114002438 -6281874 - URR1B DNA MER1_type -28 197 83 5 1454 394 281 82 7 chr13 114003046 114003193 -6281119 + RSINE1 SINE B4 2 159 -6 6 1454 273 183 0 0 chr13 114003244 114003304 -6281008 + GA-rich Low_complexity Low_complexity 3 62 0 7 1454 210 67 43 22 chr13 114004061 114004107 -6280205 + (TCC)n Simple_repeat Simple_repeat 3 49 0 8 1454 519 257 27 41 chr13 114004959 114005105 -6279207 - B1_Mur1 SINE Alu 0 149 6 9 1454 513 0 0 0 chr13 114006062 114006119 -6278193 + (TC)n Simple_repeat Simple_repeat 2 58 0 1 1454 271 295 17 110 chr13 114006462 114006580 -6277732 - L2a LINE L2 -7 3419 3313 1 1454 351 0 0 0 chr13 114007164 114007203 -6277109 + (TG)n Simple_repeat Simple_repeat 1 39 0 1 1454 211 125 82 82 chr13 114008630 114008752 -6275560 + (TATATG)n Simple_repeat Simple_repeat 5 126 0 1 1454 752 178 13 27 chr13 114010276 114010426 -6273886 - B1_Mur2 SINE Alu 0 149 2 1 1454 283 289 65 37 chr13 114011068 114011176 -6273136 + PB1D7 SINE Alu 7 117 -3 1 1454 210 37 0 0 chr13 114012898 114012925 -6271387 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1454 297 0 0 0 chr13 114013388 114013421 -6270891 + (CAAAAA)n Simple_repeat Simple_repeat 6 38 0 1 1454 531 0 0 0 chr13 114013710 114013769 -6270543 + (GA)n Simple_repeat Simple_repeat 2 60 0 1 1454 540 176 0 0 chr13 114013766 114013868 -6270444 + GA-rich Low_complexity Low_complexity 3 104 0 1 1454 180 0 0 0 chr13 114014061 114014081 -6270231 + (TC)n Simple_repeat Simple_repeat 2 21 0 2 1454 513 0 0 0 chr13 114014081 114014137 -6270175 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1454 1254 315 27 75 chr13 114014801 114014885 -6269427 - MER44B DNA MER2_type -8 542 461 2 1454 996 75 0 0 chr13 114014885 114015019 -6269293 + (TATATG)n Simple_repeat Simple_repeat 3 136 0 2 1454 312 27 0 0 chr13 114015019 114015055 -6269257 + (CA)n Simple_repeat Simple_repeat 2 38 0 2 1454 1254 315 27 75 chr13 114015055 114015532 -6268780 - MER44B DNA MER2_type -90 460 8 2 1454 240 86 0 0 chr13 114015820 114015855 -6268457 + (TAA)n Simple_repeat Simple_repeat 1 35 0 2 1454 381 275 0 0 chr13 114015855 114015935 -6268377 + ID4_ SINE ID 2 81 -2 2 1454 246 220 95 102 chr13 114015959 114016106 -6268206 - MIR SINE MIR 0 262 117 2 1454 442 332 15 77 chr13 114016127 114016388 -6267924 + MER47B DNA MER2_type 173 417 -1 2 1454 1067 269 69 26 chr13 114016897 114017244 -6267068 + MTEa LTR MaLR 9 370 -9 2 1454 922 76 0 0 chr13 114018731 114018850 -6265462 - L1_Mm LINE L1 -349 5534 5416 3 1454 2729 79 25 20 chr13 114018850 114019251 -6265061 + L1_Mus3 LINE L1 6236 6638 0 3 1454 1656 82 4 73 chr13 114020432 114020707 -6263605 - Lx LINE L1 -1 6653 6398 3 1454 1739 65 0 17 chr13 114020707 114020942 -6263370 + Lx LINE L1 6196 6426 -228 3 1454 215 207 67 79 chr13 114021630 114021719 -6262593 - B1_Mur3 SINE Alu -61 88 1 3 1454 360 0 0 0 chr13 114022312 114022352 -6261960 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 3 1454 23 0 0 0 chr13 114023058 114023081 -6261231 + AT_rich Low_complexity Low_complexity 1 23 0 3 1454 225 0 0 0 chr13 114023674 114023699 -6260613 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 3 1454 408 194 18 55 chr13 114023734 114023843 -6260469 - B1F1 SINE Alu -2 147 43 3 1454 248 147 0 0 chr13 114023936 114023970 -6260342 + MurSatRep1 Unknown Unknown 250 283 -1854 3 1454 22 56 0 0 chr13 114024221 114024257 -6260055 + AT_rich Low_complexity Low_complexity 1 36 0 3 1454 482 213 11 11 chr13 114024310 114024405 -6259907 - RSINE1 SINE B4 -22 143 49 4 1454 195 69 0 0 chr13 114024412 114024441 -6259871 + (CA)n Simple_repeat Simple_repeat 2 30 0 4 1454 282 304 71 16 chr13 114024749 114024933 -6259379 - L1MA5A LINE L1 -75 6222 6029 4 1454 367 182 39 0 chr13 114025966 114026043 -6258269 + RLTR23 LTR ERV1 349 428 -2 4 1454 359 239 10 102 chr13 114026228 114026326 -6257986 - B1F SINE Alu -51 98 10 4 1454 272 269 12 25 chr13 114026350 114026430 -6257882 - ID4_ SINE ID -3 80 2 4 1454 265 308 0 28 chr13 114026458 114026565 -6257747 + CT-rich Low_complexity Low_complexity 3 106 0 4 1454 800 192 0 0 chr13 114026576 114026722 -6257590 - B1_Mus1 SINE Alu -1 147 2 4 1454 23 0 0 0 chr13 114026839 114026862 -6257450 + AT_rich Low_complexity Low_complexity 1 23 0 4 1454 272 363 40 16 chr13 114026875 114027001 -6257311 - MER63A DNA AcHobo -76 134 6 4 1454 4590 16 0 0 chr13 114027203 114027719 -6256593 + L1Md_A LINE L1 5071 5586 -297 5 1454 8433 41 0 0 chr13 114027719 114028715 -6255597 + L1Md_A LINE L1 5587 6582 0 5 1454 363 183 0 0 chr13 114028739 114028821 -6255491 + A-rich Low_complexity Low_complexity 1 82 0 5 1454 1072 63 42 0 chr13 114028906 114029048 -6255264 - B1_Mus1 SINE Alu 0 148 1 5 1454 29 0 0 0 chr13 114029091 114029120 -6255192 + AT_rich Low_complexity Low_complexity 1 29 0 5 1454 594 303 75 55 chr13 114029188 114029639 -6254673 - RLTR11A2 LTR ERVK -65 462 3 5 1454 635 282 10 65 chr13 114029687 114029888 -6254424 + B3A SINE B2 3 192 -6 5 1454 198 0 0 0 chr13 114029891 114029913 -6254399 + (CTAAA)n Simple_repeat Simple_repeat 3 24 0 5 1454 722 240 5 74 chr13 114030080 114030269 -6254043 + B3A SINE B2 5 180 -18 5 1454 357 24 0 0 chr13 114030436 114030478 -6253834 + (GA)n Simple_repeat Simple_repeat 1 42 0 5 1454 1303 90 15 46 chr13 114031165 114031246 -6253066 - B2_Mm2 SINE B2 -3 192 109 5 1454 1199 43 0 0 chr13 114031246 114031387 -6252925 + B1_Mus1 SINE Alu 2 142 -6 6 1454 1303 90 15 46 chr13 114031387 114031502 -6252810 - B2_Mm2 SINE B2 -87 108 3 5 1454 254 301 36 12 chr13 114031522 114031606 -6252706 - Charlie17a DNA MER1_type -120 99 14 6 1454 266 219 25 88 chr13 114031654 114031734 -6252578 + RMER30 DNA MER1_type 1 75 -127 6 1454 701 194 14 27 chr13 114031741 114031889 -6252423 + B1_Mur3 SINE Alu 3 148 -1 6 1454 222 116 0 0 chr13 114031889 114031932 -6252380 + (CAAA)n Simple_repeat Simple_repeat 1 43 0 6 1454 293 274 42 0 chr13 114031970 114032065 -6252247 + RMER30 DNA MER1_type 103 201 -1 6 1454 260 253 0 11 chr13 114032220 114032312 -6252000 + CT-rich Low_complexity Low_complexity 6 96 0 6 1454 621 82 0 0 chr13 114032332 114032429 -6251883 + (TCTCTG)n Simple_repeat Simple_repeat 6 102 0 6 1455 366 254 113 27 chr13 114033574 114033724 -6250588 - RSINE1 SINE B4 0 165 3 6 1455 1036 124 11 6 chr13 114034211 114034389 -6249923 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 6 1455 252 239 15 15 chr13 114034389 114034457 -6249855 + GA-rich Low_complexity Low_complexity 1 68 0 6 1455 242 0 61 0 chr13 114034859 114034892 -6249420 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1455 1205 48 7 0 chr13 114034905 114035051 -6249261 - B1_Mus1 SINE Alu 0 148 2 7 1455 8190 49 7 3 chr13 114035903 114037572 -6246740 - L1Md_F2 LINE L1 0 6582 4906 7 1455 2306 65 0 0 chr13 114037570 114037862 -6246450 + L1Md_F2 LINE L1 4610 4901 -982 7 1455 189 0 0 0 chr13 114037867 114037888 -6246424 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1455 796 274 192 50 chr13 114038355 114038793 -6245519 + MLT1D LTR MaLR 3 502 -3 7 1455 230 322 159 14 chr13 114040458 114040672 -6243640 + MLT1J2 LTR MaLR 65 309 -139 7 1455 939 276 35 87 chr13 114041508 114041909 -6242403 + MLT1B LTR MaLR 1 380 -10 7 1455 21 0 0 0 chr13 114042056 114042077 -6242235 + AT_rich Low_complexity Low_complexity 1 21 0 7 1455 506 223 149 41 chr13 114042995 114043245 -6241067 + RLTR10A LTR ERVK 114 411 0 7 1455 631 312 86 24 chr13 114043436 114043774 -6240538 + L2 LINE L2 2121 2479 -940 7 1455 286 136 62 0 chr13 114044293 114044374 -6239938 + (TA)n Simple_repeat Simple_repeat 2 87 0 8 1455 558 0 0 0 chr13 114044560 114044622 -6239690 + (TC)n Simple_repeat Simple_repeat 1 62 0 8 1455 529 340 105 21 chr13 114044634 114045016 -6239296 + LTR80A LTR ERVL 69 482 -101 8 1455 2029 141 53 3 chr13 114046162 114046517 -6237795 - RLTR14 LTR ERV1 -3 379 7 8 1455 851 222 44 15 chr13 114047470 114047676 -6236636 + B3 SINE B2 1 212 -4 8 1455 390 263 289 36 chr13 114048295 114048599 -6235713 + L1M4 LINE L1 847 1227 -5315 8 1455 1131 94 6 6 chr13 114048643 114048814 -6235498 + B2_Mm2 SINE B2 19 189 -6 8 1455 441 0 0 0 chr13 114049849 114049898 -6234414 + (TAA)n Simple_repeat Simple_repeat 2 50 0 8 1455 326 322 0 0 chr13 114050321 114050411 -6233901 - ID_B1 SINE B4 -44 180 91 8 1455 824 114 0 67 chr13 114050795 114050945 -6233367 - B2_Mm2 SINE B2 -55 140 1 8 1455 233 307 0 98 chr13 114051158 114051270 -6233042 - MLT1A0 LTR MaLR -264 101 1 9 1455 1118 148 36 46 chr13 114051372 114051591 -6232721 + URR1A DNA MER1_type 8 224 -2 9 1455 311 327 66 43 chr13 114051640 114052013 -6232299 + MLT1H LTR MaLR 16 353 -136 9 1455 939 70 132 0 chr13 114052046 114052175 -6232137 - B1_Mus2 SINE Alu 0 147 2 9 1455 315 104 0 0 chr13 114053608 114053656 -6230656 + (TTG)n Simple_repeat Simple_repeat 3 50 0 9 1455 486 0 0 0 chr13 114054361 114054415 -6229897 + (CA)n Simple_repeat Simple_repeat 1 54 0 9 1455 297 281 125 10 chr13 114054498 114054602 -6229710 + PB1D10 SINE Alu 1 116 -1 9 1455 21 0 0 0 chr13 114054707 114054728 -6229584 + AT_rich Low_complexity Low_complexity 1 21 0 9 1455 357 24 0 0 chr13 114055209 114055251 -6229061 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 9 1455 647 246 32 27 chr13 114055722 114055910 -6228402 - B3A SINE B2 -7 191 3 9 1455 636 140 0 0 chr13 114055978 114056085 -6228227 + (CCA)n Simple_repeat Simple_repeat 1 107 0 1 1455 248 333 0 0 chr13 114056310 114056379 -6227933 - Charlie12 DNA MER1_type -2804 69 1 1 1455 450 0 0 0 chr13 114057828 114057878 -6226434 + (CA)n Simple_repeat Simple_repeat 2 51 0 1 1455 393 235 111 17 chr13 114057879 114057996 -6226316 - B1_Mur3 SINE Alu -20 129 2 1 1455 3203 25 0 29 chr13 114058745 114059121 -6225191 - RLTR10B2 LTR ERVK 0 365 1 1 1455 214 306 77 77 chr13 114059429 114059507 -6224805 - B3A SINE B2 -119 79 2 1 1455 204 120 19 39 chr13 114059737 114059789 -6224523 + CT-rich Low_complexity Low_complexity 5 55 0 1 1455 693 0 0 0 chr13 114060281 114060358 -6223954 + (CTGGGG)n Simple_repeat Simple_repeat 3 79 0 1 1455 189 294 179 68 chr13 114061106 114061223 -6223089 - MIR3 SINE MIR -10 198 69 1 1455 479 93 50 17 chr13 114061358 114061478 -6222834 + (TCTG)n Simple_repeat Simple_repeat 2 125 0 1 1455 535 299 70 8 chr13 114061701 114061829 -6222483 + B3A SINE B2 19 154 -44 1 1455 405 0 0 0 chr13 114061829 114061874 -6222438 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1455 322 271 137 59 chr13 114061874 114061909 -6222403 + B2_Mm2 SINE B2 149 193 -2 1 1455 393 136 0 0 chr13 114062209 114062275 -6222037 + (CACCAT)n Simple_repeat Simple_repeat 1 66 0 1 1455 330 115 0 0 chr13 114062576 114062628 -6221684 + (TG)n Simple_repeat Simple_repeat 1 52 0 1 1455 454 102 87 43 chr13 114062678 114062770 -6221542 - L1_Mm LINE L1 -629 5254 5159 1 1455 3477 3 0 0 chr13 114062772 114063151 -6221161 - L1Md_T LINE L1 0 6585 6207 1 1455 2914 24 0 43 chr13 114063151 114063503 -6220809 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1455 56760 22 13 7 chr13 114063503 114069937 -6214375 + IAPEz-int LTR ERVK 8 6481 0 1 1455 2914 24 0 43 chr13 114069937 114070289 -6214023 + IAPLTR1a_Mm LTR ERVK 1 337 0 1 1455 38656 30 0 0 chr13 114070289 114076332 -6207980 - L1Md_T LINE L1 -373 6212 71 1 1455 2268 98 19 3 chr13 114076332 114076651 -6207661 - L1_Mm LINE L1 -708 5175 4852 1 1455 3060 42 5 75 chr13 114076652 114077068 -6207244 + L1_Mus1 LINE L1 6181 6567 0 1 1455 663 240 175 22 chr13 114077089 114077272 -6207040 - B4 SINE B4 -61 231 21 1 1455 925 237 54 143 chr13 114077273 114077748 -6206564 + MTD LTR MaLR 2 395 -24 1 1455 2061 156 93 5 chr13 114077858 114078245 -6206067 + MTC LTR MaLR 1 421 0 1 1455 2786 133 74 18 chr13 114078621 114079120 -6205192 + RLTR11A LTR ERVK 1 527 -1 1 1455 234 293 0 26 chr13 114079230 114079307 -6205005 + RMER15 LTR ERVL 455 529 -46 1 1455 208 281 124 10 chr13 114080128 114080225 -6204087 - MIR3 SINE MIR -6 202 95 1 1455 1883 166 51 11 chr13 114080879 114081232 -6203080 - ORR1B2 LTR MaLR 0 367 1 1 1455 225 265 67 67 chr13 114081717 114081822 -6202490 + MTE2a LTR MaLR 93 197 -162 1 1455 303 256 24 24 chr13 114081912 114081996 -6202316 + MTE2a LTR MaLR 280 363 -16 1 1455 180 97 0 0 chr13 114085485 114085516 -6198796 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1 1455 1035 196 10 20 chr13 114085582 114085785 -6198527 - B3 SINE B2 -14 202 2 1 1455 243 0 0 0 chr13 114086205 114086232 -6198080 + (TG)n Simple_repeat Simple_repeat 1 27 0 1 1455 23 0 0 0 chr13 114087071 114087094 -6197218 + AT_rich Low_complexity Low_complexity 1 23 0 1 1455 38151 47 1 7 chr13 114088300 114094319 -6189993 - L1Md_F2 LINE L1 -1 6581 382 1 1455 612 185 7 20 chr13 114094465 114094614 -6189698 + CT-rich Low_complexity Low_complexity 2 148 0 1 1455 990 96 0 0 chr13 114094619 114094754 -6189558 - B1_Mus1 SINE Alu 0 148 14 1 1455 1126 255 40 99 chr13 114095753 114096127 -6188185 + ORR1E LTR MaLR 2 353 -6 1 1455 1038 231 157 86 chr13 114097225 114098037 -6186275 - L1MA5A LINE L1 -277 6722 5870 1 1455 2182 38 4 0 chr13 114098135 114098396 -6185916 - RLTR10-int LTR ERVK -1685 302 41 1 1455 2545 47 6 224 chr13 114098406 114098905 -6185407 - RLTR10 LTR ERVK 0 390 1 1 1455 16487 30 7 30 chr13 114098907 114100896 -6183416 - RLTR10-int LTR ERVK -3 1984 41 1 1455 1781 88 253 0 chr13 114100912 114101220 -6183092 - RLTR10 LTR ERVK -4 386 1 1 1455 1076 228 196 28 chr13 114101223 114102219 -6182093 - L1MA5A LINE L1 -1150 5695 5098 1 1455 3678 178 57 89 chr13 114102221 114103060 -6181252 - RLTR40 LTR ERVK 0 817 6 1 1455 495 295 50 0 chr13 114103078 114103278 -6181034 - L1MA5A LINE L1 -3508 3337 3128 1 1455 429 20 0 0 chr13 114103293 114103343 -6180969 + (TG)n Simple_repeat Simple_repeat 1 50 0 1 1455 532 294 72 23 chr13 114103497 114103803 -6180509 - L1MA5A LINE L1 -3704 3141 2821 1 1455 363 282 54 9 chr13 114103934 114104045 -6180267 + PB1D10 SINE Alu 1 116 -1 1 1455 731 284 46 82 chr13 114104050 114104165 -6180147 - L1MA5A LINE L1 -4455 2394 2286 1 1455 1990 103 9 59 chr13 114104165 114104504 -6179808 - RLTRETN_Mm LTR ERVK 0 322 1 1 1455 731 284 46 82 chr13 114104504 114104914 -6179398 - L1MA5A LINE L1 -4564 2285 1888 1 1455 560 214 45 30 chr13 114105074 114105293 -6179019 - L1MA4 LINE L1 -184 5996 5768 1 1455 231 274 67 80 chr13 114105291 114105406 -6178906 - L1MA5A LINE L1 -4969 1880 1766 1 1455 3214 42 34 3 chr13 114105406 114105792 -6178520 - MTB LTR MaLR -2 398 1 1 1455 231 274 67 80 chr13 114105792 114105914 -6178398 - L1MA5A LINE L1 -5084 1765 1646 1 1455 744 146 81 0 chr13 114106025 114106148 -6178164 + B1_Mur3 SINE Alu 1 133 -16 1 1455 633 379 59 3 chr13 114106909 114107229 -6177083 - LTR16A LTR ERVL -8 443 106 1 1455 266 245 114 120 chr13 114107643 114107801 -6176511 - MLT1A1 LTR MaLR -251 157 1 1 1455 189 163 0 0 chr13 114111512 114111561 -6172751 + CT-rich Low_complexity Low_complexity 1 49 0 1 1455 29 0 0 0 chr13 114112715 114112744 -6171568 + AT_rich Low_complexity Low_complexity 1 29 0 1 1455 884 181 129 26 chr13 114114331 114114524 -6169788 + B3 SINE B2 1 213 -3 1 1455 465 90 0 0 chr13 114115428 114115495 -6168817 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 1455 321 26 0 0 chr13 114115495 114115533 -6168779 + (TA)n Simple_repeat Simple_repeat 1 38 0 1 1455 204 335 68 68 chr13 114115635 114115840 -6168472 - L2a LINE L2 -1 3425 3221 1 1455 1043 246 57 75 chr13 114116784 114117199 -6167113 - MTE2a LTR MaLR 0 419 1 1 1455 31 0 0 0 chr13 114117686 114117717 -6166595 + AT_rich Low_complexity Low_complexity 1 31 0 1 1455 270 0 0 0 chr13 114118208 114118238 -6166074 + (TG)n Simple_repeat Simple_repeat 1 30 0 1 1455 613 301 37 50 chr13 114118238 114118399 -6165913 - RSINE1 SINE B4 -3 162 4 1 1455 1590 185 128 9 chr13 114118593 114118921 -6165391 - ORR1B2 LTR MaLR 0 367 1 1 1455 3588 125 25 12 chr13 114118923 114119522 -6164790 - ORR1B2-int LTR MaLR -2 1507 901 1 1455 316 267 45 34 chr13 114119560 114119649 -6164663 - RLTR20B1 LTR ERVK -4 559 470 1 1455 339 25 0 0 chr13 114119649 114119689 -6164623 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1455 1521 221 62 21 chr13 114119694 114120078 -6164234 - RLTR20B1 LTR ERVK -163 400 1 1 1455 2159 177 141 14 chr13 114120078 114120560 -6163752 - RMER4B LTR ERVK -26 559 17 1 1455 3491 182 82 7 chr13 114120554 114121408 -6162904 - ORR1B2-int LTR MaLR -591 918 1 1 1455 216 0 0 0 chr13 114121415 114121439 -6162873 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1 1455 1156 51 0 0 chr13 114121439 114121577 -6162735 - B1_Mus1 SINE Alu -9 139 2 1 1455 2056 144 24 68 chr13 114121585 114121965 -6162347 - ORR1B2 LTR MaLR 0 367 5 1 1455 573 330 37 11 chr13 114122008 114122195 -6162117 + Lx8 LINE L1 7049 7240 -233 1 1455 3202 32 37 5 chr13 114122911 114123293 -6161019 + MTA_Mm LTR MaLR 1 394 -2 1 1455 757 280 71 49 chr13 114123696 114124061 -6160251 - MER68 LTR ERVL -74 489 117 1 1455 206 326 105 0 chr13 114124515 114124601 -6159711 - MIR SINE MIR -140 122 28 1 1455 690 212 48 96 chr13 114124999 114125228 -6159084 - B4A SINE B4 -68 224 7 1 1455 252 59 0 0 chr13 114125707 114125741 -6158571 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1455 414 0 0 0 chr13 114125742 114125788 -6158524 + (GA)n Simple_repeat Simple_repeat 1 46 0 1 1455 308 24 24 0 chr13 114126874 114126915 -6157397 + (CA)n Simple_repeat Simple_repeat 1 42 0 1 1455 395 245 54 9 chr13 114126916 114127027 -6157285 - RSINE1 SINE B4 -35 130 15 1 1455 233 29 0 0 chr13 114127470 114127504 -6156808 - L1_Mus2 LINE L1 -3 6563 6530 1 1455 285 280 0 0 chr13 114127665 114127740 -6156572 - ID4_ SINE ID -2 81 7 1 1455 668 241 37 42 chr13 114128832 114129023 -6155289 + B3A SINE B2 3 192 -6 1 1455 349 281 89 48 chr13 114129179 114129389 -6154923 - MIRc SINE MIR -6 262 23 1 1455 340 200 37 12 chr13 114129473 114129554 -6154758 - ORR1D1 LTR MaLR 0 384 302 1 1455 666 99 10 0 chr13 114129561 114129662 -6154650 - ORR1D1 LTR MaLR -272 102 1 1 1455 189 147 0 0 chr13 114129706 114129740 -6154572 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1455 381 22 0 0 chr13 114129847 114129893 -6154419 + (ATG)n Simple_repeat Simple_repeat 2 47 0 1 1455 860 120 192 9 chr13 114130306 114130504 -6153808 - ORR1C2 LTR MaLR 0 384 97 1 1455 381 127 0 0 chr13 114130504 114130583 -6153729 + (GA)n Simple_repeat Simple_repeat 2 80 0 1 1455 840 171 41 0 chr13 114130583 114130753 -6153559 - ORR1C2 LTR MaLR -189 195 19 1 1455 247 326 23 0 chr13 114131522 114131608 -6152704 + L2a LINE L2 3317 3404 -22 1 1455 738 256 49 36 chr13 114131641 114131864 -6152448 + B4 SINE B4 65 290 -2 1 1455 373 237 13 38 chr13 114132382 114132461 -6151851 + B3 SINE B2 130 206 -10 1 1455 279 181 51 77 chr13 114133125 114133203 -6151109 + L2a LINE L2 3350 3425 -1 1 1455 180 240 0 91 chr13 114133225 114133280 -6151032 - L2a LINE L2 -27 3399 3350 1 1455 770 168 38 14 chr13 114135411 114135680 -6148632 - Lx9 LINE L1 -1 7643 7302 1 1455 2009 133 45 31 chr13 114136040 114136398 -6147914 + Lx LINE L1 6292 6654 0 1 1455 384 260 76 8 chr13 114137210 114137342 -6146970 - B1F SINE Alu -8 141 1 1 1455 873 230 26 0 chr13 114137342 114137415 -6146897 - ID SINE ID -139 85 8 1 1455 203 184 0 0 chr13 114137621 114137659 -6146653 + A-rich Low_complexity Low_complexity 1 38 0 1 1455 652 197 40 20 chr13 114137942 114138092 -6146220 - B3 SINE B2 0 216 64 1 1455 26 50 0 0 chr13 114139709 114139749 -6144563 + AT_rich Low_complexity Low_complexity 1 40 0 1 1455 327 248 16 89 chr13 114139779 114139903 -6144409 + MT2B LTR ERVL 143 257 -344 1 1455 808 145 0 0 chr13 114139805 114139936 -6144376 + B1_Mus1 SINE Alu 6 136 -12 1 1455 229 282 14 14 chr13 114140686 114140758 -6143554 + (TATG)n Simple_repeat Simple_repeat 3 74 0 1 1455 450 0 0 0 chr13 114140923 114140973 -6143339 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1455 711 241 24 24 chr13 114142197 114142363 -6141949 + B3A SINE B2 2 167 -31 1 1455 288 111 0 0 chr13 114142376 114142421 -6141891 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1455 385 360 12 6 chr13 114143285 114143450 -6140862 - MLT1I LTR MaLR -6 405 240 2 1455 259 300 14 0 chr13 114144488 114144558 -6139754 - MIR SINE MIR -114 94 24 2 1455 648 315 135 17 chr13 114144786 114145148 -6139164 - MER54A LTR ERVL -489 412 8 2 1455 414 0 0 0 chr13 114145787 114145833 -6138479 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1455 280 282 12 12 chr13 114146356 114146442 -6137870 + B4A SINE B4 2 87 -205 2 1455 216 0 0 0 chr13 114146500 114146524 -6137788 + (CA)n Simple_repeat Simple_repeat 1 24 0 2 1455 3505 23 2 0 chr13 114148407 114148802 -6135510 + MTA_Mm LTR MaLR 1 396 0 2 1455 998 233 126 78 chr13 114148957 114149353 -6134959 + MTD LTR MaLR 5 419 0 2 1455 416 307 137 19 chr13 114149966 114150228 -6134084 + MLT1D LTR MaLR 39 331 -174 2 1455 688 280 118 8 chr13 114150616 114150861 -6133451 - B4A SINE B4 -20 272 1 2 1455 821 61 0 0 chr13 114151852 114151966 -6132346 - B1_Mm SINE Alu 0 147 34 2 1455 642 291 148 42 chr13 114152151 114152481 -6131831 - MTE2b LTR MaLR -14 365 1 2 1455 530 0 0 30 chr13 114152801 114152868 -6131444 + (TCCC)n Simple_repeat Simple_repeat 1 65 0 2 1455 727 174 0 0 chr13 114152958 114153096 -6131216 + B1_Mus2 SINE Alu 10 147 0 2 1455 306 181 97 0 chr13 114153099 114153171 -6131141 + Lx8 LINE L1 7393 7471 -2 2 1455 539 262 62 31 chr13 114153599 114153855 -6130457 - L1MC4 LINE L1 -214 7828 7565 2 1455 489 237 114 0 chr13 114153880 114153994 -6130318 - RSINE1 SINE B4 -22 143 17 2 1455 358 303 63 78 chr13 114154083 114154480 -6129832 - L1MC4 LINE L1 -536 7506 7116 2 1455 270 136 0 0 chr13 114154771 114154815 -6129497 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1455 287 318 108 27 chr13 114154977 114155200 -6129112 + L1MC5 LINE L1 7610 7850 -111 2 1455 4555 126 46 19 chr13 114155225 114156013 -6128299 + RMER17D2 LTR ERVK 1 809 0 2 1455 411 56 0 0 chr13 114157048 114157102 -6127210 + (CA)n Simple_repeat Simple_repeat 1 54 0 2 1455 745 272 79 74 chr13 114157115 114157241 -6127071 - L1MA4 LINE L1 -379 5921 5797 2 1455 423 0 0 0 chr13 114157241 114157288 -6127024 + (TA)n Simple_repeat Simple_repeat 2 48 0 2 1455 745 272 79 74 chr13 114157288 114157514 -6126798 - L1MA4 LINE L1 -504 5796 5567 2 1455 329 325 24 0 chr13 114159731 114159857 -6124455 + C-rich Low_complexity Low_complexity 4 132 0 2 1455 298 264 43 65 chr13 114160674 114160812 -6123500 - MER58C DNA MER1_type -15 200 66 2 1455 597 221 0 0 chr13 114161553 114161666 -6122646 + B1F SINE Alu 1 113 -36 2 1455 211 118 0 89 chr13 114161672 114161728 -6122584 + A-rich Low_complexity Low_complexity 3 53 0 2 1455 1037 141 0 6 chr13 114162153 114162332 -6121980 + (TA)n Simple_repeat Simple_repeat 1 178 0 2 1455 276 30 0 0 chr13 114162359 114162392 -6121920 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1456 3930 36 0 8 chr13 114165365 114165835 -6118477 + L1Md_F2 LINE L1 5121 5586 -297 2 1456 8453 30 3 2 chr13 114165835 114166827 -6117485 + L1Md_F2 LINE L1 5587 6579 -3 2 1456 799 282 143 71 chr13 114167596 114168142 -6116170 - L1MD3 LINE L1 -91 7904 7320 2 1456 838 264 82 22 chr13 114170549 114170816 -6113496 + B4 SINE B4 2 284 -8 2 1456 496 286 70 100 chr13 114171373 114171743 -6112569 - ORR1E LTR MaLR -1 373 1 2 1456 337 281 16 102 chr13 114173085 114173212 -6111100 - PB1D9 SINE Alu -2 118 3 2 1456 1294 207 3 98 chr13 114173416 114173743 -6110569 - RMER19C LTR ERVK -19 592 297 2 1456 2046 203 4 221 chr13 114173955 114174708 -6109604 - RMER19C LTR ERVK -19 592 3 2 1456 1142 182 109 164 chr13 114174708 114175075 -6109237 - ORR1C1 LTR MaLR -31 347 1 2 1456 192 182 0 0 chr13 114175862 114175906 -6108406 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 2 1456 2301 229 63 55 chr13 114176066 114176427 -6107885 - Lx7 LINE L1 0 7696 7358 2 1456 248 0 0 30 chr13 114176427 114176460 -6107852 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1456 2301 229 63 55 chr13 114176460 114176846 -6107466 - Lx7 LINE L1 -339 7357 6943 2 1456 411 21 0 0 chr13 114176933 114176981 -6107331 + (GAAAA)n Simple_repeat Simple_repeat 2 49 0 2 1456 670 304 52 23 chr13 114177214 114177558 -6106754 - MLT2B1 LTR ERVL -59 503 77 2 1456 229 298 85 0 chr13 114177563 114177657 -6106655 - MTEb LTR MaLR 0 379 278 2 1456 1537 181 111 8 chr13 114177803 114178154 -6106158 + ORR1B1 LTR MaLR 3 389 -5 2 1456 1628 314 83 63 chr13 114178425 114178459 -6105853 - Lx8 LINE L1 -737 6736 6706 2 1456 216 0 0 0 chr13 114178459 114178483 -6105829 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2 1456 1628 314 83 63 chr13 114178483 114178975 -6105337 - Lx8 LINE L1 -768 6705 6200 2 1456 414 0 0 0 chr13 114178975 114179021 -6105291 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1456 1628 314 83 63 chr13 114179021 114179094 -6105218 - Lx8 LINE L1 -1274 6199 6129 2 1456 901 163 14 7 chr13 114179094 114179242 -6105070 - B1_Mur3 SINE Alu 0 149 1 2 1456 1628 280 97 42 chr13 114179242 114179796 -6104516 - Lx8 LINE L1 -1345 6128 5527 2 1456 807 315 158 9 chr13 114179806 114180229 -6104083 + Lx8 LINE L1 6737 7222 -251 2 1456 3533 25 0 0 chr13 114180964 114181358 -6102954 - MTA_Mm LTR MaLR -2 394 1 2 1456 26 0 0 0 chr13 114181553 114181579 -6102733 + AT_rich Low_complexity Low_complexity 1 26 0 2 1456 867 161 62 11 chr13 114181761 114181937 -6102375 - ORR1D1 LTR MaLR 0 374 190 2 1456 254 203 70 28 chr13 114181904 114181975 -6102337 - ID_B1 SINE B4 -54 170 97 2 1456 335 303 64 119 chr13 114182113 114182364 -6101948 - MLT1F1 LTR MaLR -22 547 311 2 1456 499 307 0 52 chr13 114182959 114183131 -6101181 - RSINE1 SINE B4 -2 163 1 2 1456 402 279 137 39 chr13 114183443 114183648 -6100664 + MLT1A LTR MaLR 137 361 -13 2 1456 702 34 0 0 chr13 114185517 114185606 -6098706 - B1_Mm SINE Alu -8 139 51 2 1456 1082 80 25 11 chr13 114186130 114186407 -6097905 + (GAAA)n Simple_repeat Simple_repeat 1 280 0 2 1456 722 140 165 123 chr13 114186838 114187050 -6097262 - URR1A DNA MER1_type -1 225 5 2 1456 414 307 131 64 chr13 114187180 114187662 -6096650 + MLT1G3 LTR MaLR 42 587 -8 2 1456 214 241 19 0 chr13 114188080 114188112 -6096200 + polypyrimidine Low_complexity Low_complexity 25 56 0 2 1456 1217 90 0 6 chr13 114188112 114188290 -6096022 + (TTC)n Simple_repeat Simple_repeat 3 179 0 2 1456 214 241 19 0 chr13 114188290 114188311 -6096001 + polypyrimidine Low_complexity Low_complexity 3 24 0 2 1456 518 205 148 0 chr13 114188314 114188436 -6095876 - B1_Mur1 SINE Alu -8 141 2 2 1456 265 197 98 0 chr13 114188706 114188767 -6095545 + RSINE1 SINE B4 1 67 -98 2 1456 2238 147 122 21 chr13 114188937 114189319 -6094993 + RLTR20B2 LTR ERVK 38 452 -108 2 1456 216 0 0 0 chr13 114189319 114189343 -6094969 + (TG)n Simple_repeat Simple_repeat 2 25 0 2 1456 2238 147 122 21 chr13 114189343 114189427 -6094885 + RLTR20B2 LTR ERVK 453 550 -10 2 1456 502 282 138 5 chr13 114189598 114189822 -6094490 - L1MB3 LINE L1 -62 6121 5868 2 1456 303 279 13 0 chr13 114190326 114190405 -6093907 + B3 SINE B2 72 151 -65 2 1456 270 0 0 0 chr13 114190406 114190436 -6093876 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1456 23 92 0 0 chr13 114190457 114190522 -6093790 + AT_rich Low_complexity Low_complexity 1 65 0 2 1456 619 211 26 0 chr13 114190853 114190967 -6093345 + B1_Mur1 SINE Alu 1 117 -32 2 1456 278 296 0 101 chr13 114190965 114191074 -6093238 + PB1D9 SINE Alu 23 120 0 2 1456 21 57 0 0 chr13 114191472 114191507 -6092805 + AT_rich Low_complexity Low_complexity 1 35 0 2 1456 390 335 40 31 chr13 114192402 114192630 -6091682 + MLT1B LTR MaLR 1 230 -160 2 1456 307 299 58 0 chr13 114192938 114193075 -6091237 + MLT-int LTR MaLR 33 177 -1558 2 1456 580 50 0 57 chr13 114193097 114193203 -6091109 + (TCTCCC)n Simple_repeat Simple_repeat 1 100 0 2 1456 248 170 19 87 chr13 114193203 114193306 -6091006 - Lx6 LINE L1 -29 7431 7336 2 1456 402 134 0 0 chr13 114193310 114193377 -6090935 + 5S rRNA rRNA 27 93 -28 2 1456 390 308 110 113 chr13 114193919 114194245 -6090067 + MLT-int LTR MaLR 179 544 -1191 2 1456 1131 332 117 11 chr13 114194612 114195185 -6089127 + MLT-int LTR MaLR 1102 1735 0 2 1456 369 0 0 0 chr13 114195269 114195310 -6089002 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1456 612 241 56 25 chr13 114196006 114196168 -6088144 - MER20 DNA MER1_type -2 217 51 2 1456 312 248 56 96 chr13 114196377 114196502 -6087810 + PB1D9 SINE Alu 1 120 0 2 1456 1284 89 0 0 chr13 114196559 114196739 -6087573 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2 1456 663 278 17 6 chr13 114197296 114197473 -6086839 - B3A SINE B2 -16 182 4 2 1456 815 110 0 8 chr13 114198211 114198339 -6085973 + B1_Mur4 SINE Alu 22 148 -2 2 1456 320 287 138 14 chr13 114198369 114198507 -6085805 - RSINE1 SINE B4 0 165 11 2 1456 464 266 37 37 chr13 114199637 114199828 -6084484 + MER5C DNA MER1_type 119 309 -4 2 1456 316 277 158 0 chr13 114200815 114200916 -6083396 - PB1D10 SINE Alu 0 117 1 2 1456 282 303 91 0 chr13 114200830 114200929 -6083383 - ID_B1 SINE B4 -48 176 69 2 1456 954 130 0 0 chr13 114201911 114202057 -6082255 + ORR1A3 LTR MaLR 17 162 -165 2 1456 767 58 0 0 chr13 114202070 114202173 -6082139 - B1_Mus2 SINE Alu -2 145 43 2 1456 1000 87 93 0 chr13 114202170 114202320 -6081992 + ORR1A3 LTR MaLR 161 324 -2 2 1456 971 146 175 10 chr13 114202564 114202758 -6081554 - URR1A DNA MER1_type 0 226 1 2 1456 206 222 0 0 chr13 114203178 114203223 -6081089 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1456 1696 214 33 0 chr13 114203229 114203588 -6080724 - MT2A LTR ERVL -71 462 92 2 1456 1074 180 122 25 chr13 114203898 114204078 -6080234 - RMER17C LTR ERVK -8 402 192 2 1456 878 83 14 20 chr13 114204078 114204226 -6080086 + (GAGAA)n Simple_repeat Simple_repeat 5 151 0 2 1456 1074 173 81 21 chr13 114204226 114204514 -6079798 - RMER17C LTR ERVK -552 406 17 2 1456 612 258 57 51 chr13 114204893 114205069 -6079243 + B4 SINE B4 1 177 -115 2 1456 213 254 0 0 chr13 114206402 114206473 -6077839 + (TA)n Simple_repeat Simple_repeat 2 72 0 2 1456 231 276 90 22 chr13 114206815 114206904 -6077408 + ORR1E LTR MaLR 55 149 -210 2 1456 383 309 78 90 chr13 114206944 114207157 -6077155 + ORR1E LTR MaLR 51 259 -100 2 1456 2061 210 136 68 chr13 114207157 114207729 -6076583 - RMER19C LTR ERVK 0 611 1 3 1456 383 309 78 90 chr13 114207729 114207771 -6076541 + ORR1E LTR MaLR 260 303 -56 2 1456 295 256 11 44 chr13 114208288 114208378 -6075934 + MER67A LTR ERV1 457 543 0 3 1456 180 111 0 0 chr13 114208691 114208718 -6075594 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1456 1395 144 60 13 chr13 114209896 114210128 -6074184 + RMER1B Other Other 612 854 -212 3 1456 244 294 0 14 chr13 114210554 114210623 -6073689 + ID4_ SINE ID 14 81 -2 3 1456 493 327 36 45 chr13 114210702 114210923 -6073389 + ID_B1 SINE B4 2 220 -4 3 1456 229 333 28 19 chr13 114210986 114211093 -6073219 + MER58B DNA MER1_type 218 325 -16 3 1456 257 83 0 40 chr13 114211094 114211144 -6073168 + (CAAAAA)n Simple_repeat Simple_repeat 4 51 0 3 1456 511 280 148 0 chr13 114212093 114212275 -6072037 + MER20 DNA MER1_type 1 209 -10 3 1456 840 142 14 0 chr13 114212509 114212657 -6071655 - URR1A DNA MER1_type 0 226 77 3 1456 352 256 13 0 chr13 114212777 114212855 -6071457 + ID4 SINE ID 2 80 -3 3 1456 696 310 134 27 chr13 114212894 114213159 -6071153 - MLT1C LTR MaLR -14 453 169 3 1456 468 0 0 0 chr13 114213159 114213211 -6071101 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1456 696 310 134 27 chr13 114213211 114213349 -6070963 - MLT1C LTR MaLR -299 168 8 3 1456 438 53 0 0 chr13 114213628 114213685 -6070627 + (TG)n Simple_repeat Simple_repeat 1 57 0 3 1456 318 297 70 28 chr13 114214464 114214606 -6069706 - ORR1E LTR MaLR -182 177 30 3 1456 3287 298 73 80 chr13 114214583 114216134 -6068178 - ORR1E-int LTR MaLR -20 1560 20 3 1456 401 259 110 14 chr13 114216140 114216285 -6068027 + ORR1E LTR MaLR 37 195 -164 3 1456 234 333 157 0 chr13 114216385 114216493 -6067819 + ORR1E LTR MaLR 251 375 -4 3 1456 384 254 9 10 chr13 114217013 114217125 -6067187 - PB1D10 SINE Alu -31 118 1 3 1456 805 92 30 0 chr13 114217325 114217456 -6066856 + (TTTC)n Simple_repeat Simple_repeat 3 137 0 3 1456 8026 64 22 7 chr13 114218126 114218647 -6065665 - L1_Mus3 LINE L1 -1 6637 6115 3 1456 2843 61 0 3 chr13 114218647 114218994 -6065318 - ORR1A0 LTR MaLR 0 346 1 3 1456 8026 87 14 4 chr13 114218994 114219963 -6064349 - L1_Mus3 LINE L1 -524 6114 5157 3 1456 381 277 161 21 chr13 114220511 114220703 -6063609 + LTR53 LTR ERVL 288 506 -13 3 1456 216 0 0 0 chr13 114220744 114220768 -6063544 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 3 1456 548 357 10 31 chr13 114220774 114221063 -6063249 - B4A SINE B4 -8 284 2 3 1456 1095 234 182 0 chr13 114221326 114221655 -6062657 - MTD LTR MaLR 0 419 31 3 1456 535 236 57 8 chr13 114222295 114222419 -6061893 - B3 SINE B2 -86 130 1 3 1456 514 217 58 0 chr13 114222456 114222576 -6061736 - RSINE1 SINE B4 -36 129 3 3 1456 229 0 26 53 chr13 114224262 114224300 -6060012 + (TTTTTG)n Simple_repeat Simple_repeat 1 37 0 3 1456 297 326 44 29 chr13 114225458 114225594 -6058718 + MIRc SINE MIR 19 156 -112 3 1456 1848 162 24 24 chr13 114225773 114226183 -6058129 - RMER17C LTR ERVK 0 410 1 3 1456 1554 283 57 116 chr13 114226370 114227114 -6057198 - Lx7 LINE L1 -391 7305 6606 3 1456 402 214 27 14 chr13 114228960 114229107 -6055205 + CT-rich Low_complexity Low_complexity 1 149 0 3 1456 571 250 0 0 chr13 114230758 114230878 -6053434 - RSINE1 SINE B4 -37 128 9 3 1456 285 109 0 0 chr13 114230892 114230938 -6053374 + (CTTG)n Simple_repeat Simple_repeat 1 46 0 3 1456 1040 133 77 6 chr13 114230970 114231152 -6053160 + B2_Mm2 SINE B2 1 195 0 3 1456 249 289 20 40 chr13 114231802 114231903 -6052409 + BC1_Mm scRNA scRNA 6 104 -48 3 1456 21 36 0 0 chr13 114233144 114233172 -6051140 + AT_rich Low_complexity Low_complexity 1 28 0 3 1456 682 287 179 24 chr13 114233320 114233732 -6050580 - MLT1F2 LTR MaLR -31 529 43 3 1456 322 225 90 16 chr13 114233901 114234023 -6050289 - L1MA9 LINE L1 -1 6311 6181 3 1456 579 221 74 25 chr13 114234045 114234207 -6050105 - L1MA9 LINE L1 -275 6037 5868 3 1456 569 271 53 53 chr13 114234359 114234434 -6049878 + LTR40b LTR ERVL 136 208 -254 3 1456 3585 23 0 0 chr13 114234434 114234830 -6049482 + MTA_Mm LTR MaLR 1 396 0 3 1456 569 271 53 53 chr13 114234830 114235035 -6049277 + LTR40b LTR ERVL 209 416 -46 3 1456 401 320 115 33 chr13 114235193 114235645 -6048667 + HAL1 LINE L1 1167 1655 -852 3 1456 3017 17 122 0 chr13 114236013 114236366 -6047946 + MTA_Mm LTR MaLR 1 396 0 3 1456 192 311 27 13 chr13 114237424 114237499 -6046813 - MIRb SINE MIR -166 102 27 3 1456 348 329 52 26 chr13 114237620 114237773 -6046539 - LTR16C LTR ERVL -110 379 223 3 1456 295 285 143 18 chr13 114238405 114238573 -6045739 + MIRb SINE MIR 58 246 -22 3 1456 234 0 0 0 chr13 114238830 114238856 -6045456 + (T)n Simple_repeat Simple_repeat 1 26 0 3 1456 1217 276 135 29 chr13 114239572 114240472 -6043840 - L1M2 LINE L1 -534 5622 4617 3 1456 471 301 16 171 chr13 114240580 114240832 -6043480 - MTE2b LTR MaLR 0 379 167 3 1456 1500 275 132 52 chr13 114240852 114241543 -6042769 - Lx9 LINE L1 -63 7581 6836 3 1456 394 267 121 8 chr13 114241557 114241689 -6042623 - MTE2b LTR MaLR -229 150 4 3 1456 6638 108 23 17 chr13 114241726 114243259 -6041053 - Lx3C LINE L1 -334 6642 5095 3 1456 2202 121 9 6 chr13 114243259 114243599 -6040713 + Lx3C LINE L1 6634 6974 -2 3 1456 189 107 0 0 chr13 114243605 114243633 -6040679 + (GGAGAA)n Simple_repeat Simple_repeat 5 32 0 3 1456 1308 79 0 0 chr13 114243633 114243811 -6040501 + (GAA)n Simple_repeat Simple_repeat 3 180 0 3 1456 192 158 0 0 chr13 114244528 114244566 -6039746 + (TTG)n Simple_repeat Simple_repeat 2 39 0 3 1456 279 0 0 0 chr13 114245544 114245575 -6038737 + (GA)n Simple_repeat Simple_repeat 2 32 0 3 1456 415 387 65 0 chr13 114245764 114245994 -6038318 + LTR16A LTR ERVL 3 247 -204 3 1456 294 29 0 0 chr13 114246282 114246317 -6037995 + (GGGAA)n Simple_repeat Simple_repeat 4 38 0 3 1456 594 75 0 0 chr13 114246317 114246397 -6037915 + (GAGAA)n Simple_repeat Simple_repeat 1 80 0 3 1456 1062 45 0 0 chr13 114246398 114246530 -6037782 + (GGGAA)n Simple_repeat Simple_repeat 4 135 0 3 1456 259 257 28 28 chr13 114246693 114246765 -6037547 + LTR16A LTR ERVL 1 72 -379 3 1456 1009 132 29 0 chr13 114246850 114247024 -6037288 - URR1A DNA MER1_type 0 226 48 3 1456 711 175 0 22 chr13 114247130 114247311 -6037001 + CT-rich Low_complexity Low_complexity 3 179 0 3 1456 6393 37 1 0 chr13 114247606 114248356 -6035956 + L1Md_T LINE L1 5830 6580 -2 3 1456 394 217 8 65 chr13 114248778 114248901 -6035411 - URR1B DNA MER1_type -27 198 83 3 1456 3070 280 73 22 chr13 114251429 114252398 -6031914 + Lx8 LINE L1 3347 4362 -1518 3 1456 390 42 0 0 chr13 114252398 114252446 -6031866 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1456 447 19 0 0 chr13 114252446 114252497 -6031815 + (TG)n Simple_repeat Simple_repeat 1 52 0 3 1456 3070 280 73 22 chr13 114252497 114252754 -6031558 + Lx8 LINE L1 4363 4636 -1244 3 1456 331 324 45 0 chr13 114252873 114252984 -6031328 + Lx8 LINE L1 5597 5712 -1761 3 1456 412 224 159 14 chr13 114255759 114255816 -6028496 + ID SINE ID 6 83 -141 3 1456 270 318 93 0 chr13 114255816 114255923 -6028389 + PB1D10 SINE Alu 1 117 0 3 1456 364 287 59 55 chr13 114258099 114258335 -6025977 - RMER1C Other Other -3 1339 1103 3 1456 1224 287 70 26 chr13 114258228 114258657 -6025655 - Lx8 LINE L1 -138 7335 6888 3 1456 1680 181 120 91 chr13 114259684 114259818 -6024494 + MTD LTR MaLR 1 117 -302 3 1456 1392 73 17 0 chr13 114259818 114259995 -6024317 - B2_Mm2 SINE B2 -14 181 2 3 1456 1680 181 120 91 chr13 114259995 114260267 -6024045 + MTD LTR MaLR 118 419 0 3 1456 1040 89 0 11 chr13 114260535 114260716 -6023596 + (TC)n Simple_repeat Simple_repeat 2 180 0 3 1456 312 234 148 9 chr13 114261002 114261110 -6023202 + L1_Mur3 LINE L1 692 814 -6898 3 1456 1210 266 139 13 chr13 114261231 114261692 -6022620 + L1MCa LINE L1 111 629 -5879 3 1456 282 339 16 57 chr13 114261746 114261868 -6022444 + L1MCa LINE L1 551 667 -5841 3 1456 590 139 23 11 chr13 114261895 114262069 -6022243 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 3 1456 547 200 56 40 chr13 114262101 114262226 -6022086 - B1_Mur3 SINE Alu -2 147 21 3 1456 5126 239 182 19 chr13 114262228 114264387 -6019925 + L1MCa LINE L1 2611 5121 -1200 3 1456 7410 93 46 122 chr13 114264375 114264721 -6019591 + L1_Mus1 LINE L1 4698 5059 -1508 3 1456 279 239 65 0 chr13 114264721 114264859 -6019453 + ORR1B1-int LTR MaLR 608 754 -755 3 1456 1007 59 0 0 chr13 114264763 114264899 -6019413 + B1_Mus1 SINE Alu 13 148 0 3 1456 7410 93 46 122 chr13 114264899 114265759 -6018553 + L1_Mus1 LINE L1 5060 5962 -605 3 1456 1160 75 0 0 chr13 114265759 114265906 -6018406 + B1_Mus2 SINE Alu 1 147 0 3 1456 7410 75 4 37 chr13 114265906 114266543 -6017769 + L1_Mus1 LINE L1 5963 6564 -3 3 1456 270 81 0 0 chr13 114266680 114266717 -6017595 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 3 1456 1117 274 31 53 chr13 114266726 114267174 -6017138 + L1MC LINE L1 4945 5396 -750 3 1456 370 182 15 0 chr13 114267174 114267240 -6017072 + ID4 SINE ID 3 69 -14 3 1456 327 243 29 134 chr13 114267240 114267314 -6016998 + L1MC LINE L1 5379 5441 -903 3 1456 560 214 27 0 chr13 114267348 114267460 -6016852 + ID_B1 SINE B4 110 224 0 3 1456 505 276 74 45 chr13 114267461 114267704 -6016608 + L1MC LINE L1 5436 5685 -648 3 1456 909 245 43 0 chr13 114268631 114268839 -6015473 + ID_B1 SINE B4 2 218 -6 3 1456 833 37 9 0 chr13 114268847 114268956 -6015356 + (TAGA)n Simple_repeat Simple_repeat 3 112 0 3 1456 439 180 0 18 chr13 114270797 114270910 -6013402 + CT-rich Low_complexity Low_complexity 2 112 0 3 1456 227 175 0 0 chr13 114270926 114270966 -6013346 - BC1_Mm scRNA scRNA -112 40 1 3 1456 931 189 0 0 chr13 114271485 114271633 -6012679 - B1_Mur4 SINE Alu -2 148 1 3 1456 285 290 60 72 chr13 114271836 114272003 -6012309 + MLT1I LTR MaLR 188 352 -59 3 1456 675 164 9 0 chr13 114272203 114272319 -6011993 - B3 SINE B2 -87 129 13 3 1456 24 0 0 0 chr13 114272489 114272513 -6011799 + AT_rich Low_complexity Low_complexity 1 24 0 3 1456 240 351 26 0 chr13 114273874 114273951 -6010361 - ID4 SINE ID -4 79 1 3 1456 300 286 61 18 chr13 114273968 114274082 -6010230 - B1F SINE Alu -10 139 21 3 1456 298 272 53 60 chr13 114274082 114274093 -6010219 - ID_B1 SINE B4 -2 175 91 3 1456 225 0 0 0 chr13 114275265 114275290 -6009022 + (A)n Simple_repeat Simple_repeat 1 25 0 3 1456 216 0 0 0 chr13 114275290 114275314 -6008998 + (CACAC)n Simple_repeat Simple_repeat 4 27 0 3 1456 261 0 0 0 chr13 114276303 114276332 -6007980 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 3 1456 1848 206 18 97 chr13 114278510 114279025 -6005287 - RMER19C LTR ERVK 0 611 138 3 1456 270 0 0 0 chr13 114279135 114279165 -6005147 + (CAAT)n Simple_repeat Simple_repeat 2 31 0 4 1456 354 45 0 0 chr13 114279470 114279514 -6004798 + (CATA)n Simple_repeat Simple_repeat 2 45 0 4 1456 199 237 67 17 chr13 114279723 114279783 -6004529 + MIRb SINE MIR 123 185 -83 4 1456 1260 141 50 36 chr13 114279843 114280064 -6004248 + URR1B DNA MER1_type 1 224 -1 4 1456 278 266 26 34 chr13 114282236 114282353 -6001959 - RLTR15 LTR ERVK -199 160 45 4 1456 349 123 0 0 chr13 114282441 114282506 -6001806 - RLTR12B LTR ERVK -463 65 1 4 1456 234 224 56 56 chr13 114282816 114282887 -6001425 - MLT1J1 LTR MaLR -305 139 69 4 1456 1369 108 8 12 chr13 114282906 114283147 -6001165 - ORR1A4 LTR MaLR 0 346 114 4 1456 225 180 67 11 chr13 114283450 114283540 -6000772 - Lx6 LINE L1 -43 7417 7323 4 1456 252 248 196 131 chr13 114283639 114283792 -6000520 + RSINE1 SINE B4 3 165 0 4 1456 268 229 15 30 chr13 114283798 114283827 -6000485 + ORR1B1-int LTR MaLR 622 648 -861 4 1456 1024 96 0 0 chr13 114283827 114283973 -6000339 + B1_Mus2 SINE Alu 2 147 0 4 1456 21 57 0 0 chr13 114283976 114284011 -6000301 + AT_rich Low_complexity Low_complexity 1 35 0 4 1456 949 291 70 70 chr13 114284145 114284644 -5999668 - MLT1D LTR MaLR 0 505 7 4 1456 378 0 0 0 chr13 114285358 114285400 -5998912 + (TAAA)n Simple_repeat Simple_repeat 4 45 0 4 1456 357 24 0 0 chr13 114286119 114286161 -5998151 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1456 360 0 0 0 chr13 114286161 114286200 -5998112 + (GA)n Simple_repeat Simple_repeat 1 40 0 4 1456 25 75 0 0 chr13 114286724 114286777 -5997535 + AT_rich Low_complexity Low_complexity 1 53 0 4 1456 904 193 21 27 chr13 114286798 114286984 -5997328 - Lx5 LINE L1 -80 6970 6786 4 1456 414 0 0 0 chr13 114287004 114287050 -5997262 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1456 1219 14 0 0 chr13 114287050 114287188 -5997124 - B1_Mm SINE Alu -9 138 1 4 1456 194 83 0 53 chr13 114287337 114287375 -5996937 + (GTTTG)n Simple_repeat Simple_repeat 2 37 0 4 1456 247 224 29 43 chr13 114287570 114287640 -5996672 + MIRm SINE MIR 93 161 -115 4 1456 917 291 146 23 chr13 114288798 114289196 -5995116 + MLT1C LTR MaLR 21 467 0 4 1456 260 281 0 0 chr13 114289797 114289861 -5994451 - MTEa LTR MaLR -26 353 290 4 1456 242 259 36 24 chr13 114291113 114291196 -5993116 + MTEb LTR MaLR 276 359 -20 4 1456 507 281 36 7 chr13 114291386 114291526 -5992786 + B1F1 SINE Alu 1 144 -5 4 1456 189 0 0 0 chr13 114291847 114291868 -5992444 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1456 369 0 0 0 chr13 114292029 114292070 -5992242 + (TCCCC)n Simple_repeat Simple_repeat 5 45 0 4 1456 458 271 0 17 chr13 114292150 114292270 -5992042 + MLT1A1 LTR MaLR 291 408 0 4 1456 929 289 129 32 chr13 114292508 114293066 -5991246 + MER90a LTR ERV1 1 612 -2 4 1456 543 128 0 0 chr13 114293255 114293341 -5990971 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 4 1456 7506 78 6 4 chr13 114293475 114294578 -5989734 - L1_Mus1 LINE L1 0 6567 5462 4 22 4340 132 65 21 chr13 114294620 114295470 -5988842 + RMER17A2 LTR ERVK 1 887 -19 4 1457 528 302 19 112 chr13 114295732 114296045 -5988267 + B4A SINE B4 4 287 -5 4 1457 746 150 113 0 chr13 114296607 114296740 -5987572 + B1_Mus1 SINE Alu 1 148 0 4 1457 217 211 0 0 chr13 114296740 114296778 -5987534 + polypurine Low_complexity Low_complexity 2 39 0 4 1457 1101 223 0 0 chr13 114297254 114297478 -5986834 + URR1B DNA MER1_type 1 224 -1 4 1457 3572 18 2 128 chr13 114297609 114298108 -5986204 - RLTR10C LTR ERVK 0 436 1 4 1457 809 258 104 55 chr13 114298618 114298983 -5985329 - MLT1B LTR MaLR -2 388 6 4 1457 304 262 87 104 chr13 114300427 114300610 -5983702 + L1MC3 LINE L1 7598 7777 -8 4 1457 279 0 0 0 chr13 114300800 114300831 -5983481 + (A)n Simple_repeat Simple_repeat 1 31 0 4 1457 344 314 19 0 chr13 114301431 114301536 -5982776 - MLT1A0 LTR MaLR -258 107 1 4 1457 720 168 138 44 chr13 114301775 114301843 -5982469 - URR1A DNA MER1_type -28 198 135 4 1457 3502 35 0 0 chr13 114301843 114302239 -5982073 + MTA_Mm LTR MaLR 1 396 0 4 1457 9418 30 2 0 chr13 114302239 114303335 -5980977 + MTA_Mm-int LTR MaLR 1 1098 0 4 1457 3418 45 0 0 chr13 114303335 114303731 -5980581 + MTA_Mm LTR MaLR 1 396 0 4 1457 720 168 138 44 chr13 114303731 114303841 -5980471 - URR1A DNA MER1_type -92 134 3 4 1457 675 228 99 20 chr13 114304495 114304696 -5979616 - Lx6 LINE L1 -1303 6157 5941 4 1457 1856 189 14 3 chr13 114304706 114305050 -5979262 + Lx6 LINE L1 7057 7404 -56 4 1457 206 211 0 0 chr13 114305846 114305884 -5978428 + C-rich Low_complexity Low_complexity 2 39 0 4 1457 301 208 0 0 chr13 114306161 114306214 -5978098 + ID_B1 SINE B4 163 215 -9 4 1457 248 70 0 23 chr13 114306318 114306362 -5977950 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1457 1179 48 0 13 chr13 114306830 114306979 -5977333 + B1_Mm SINE Alu 1 147 0 4 1457 230 128 0 0 chr13 114307092 114307131 -5977181 + U2 snRNA snRNA 1 39 -149 4 1457 371 317 20 34 chr13 114307649 114307796 -5976516 - RSINE1 SINE B4 -13 152 8 4 1457 259 277 107 81 chr13 114308118 114308267 -5976045 - MLT1J LTR MaLR -121 391 239 4 1457 305 333 18 44 chr13 114308769 114308882 -5975430 + RSINE1 SINE B4 44 153 -12 4 1457 23 0 0 0 chr13 114308904 114308927 -5975385 + AT_rich Low_complexity Low_complexity 1 23 0 4 1457 426 39 0 0 chr13 114309679 114309731 -5974581 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1457 808 246 39 0 chr13 114309732 114309911 -5974401 - B3 SINE B2 -30 186 1 4 1457 21 0 0 0 chr13 114310036 114310057 -5974255 + AT_rich Low_complexity Low_complexity 1 21 0 4 1457 327 85 0 0 chr13 114310188 114310235 -5974077 + (TC)n Simple_repeat Simple_repeat 2 48 0 4 1457 361 158 0 0 chr13 114310530 114310606 -5973706 + PB1D10 SINE Alu 26 101 -16 4 1457 1917 145 35 10 chr13 114310659 114310973 -5973339 + ORR1A3 LTR MaLR 5 326 0 4 1457 241 311 22 11 chr13 114311012 114311103 -5973209 - L2a LINE L2 -1 3425 3334 4 1457 571 320 62 56 chr13 114311439 114311743 -5972569 + LTR40a LTR ERVL 155 460 -5 4 1457 1584 37 0 11 chr13 114312567 114312756 -5971556 + B2_Mm1t SINE B2 1 187 -6 4 1457 21 0 0 0 chr13 114312864 114312885 -5971427 + AT_rich Low_complexity Low_complexity 1 21 0 4 1457 249 279 0 25 chr13 114313174 114313255 -5971057 + MTEb LTR MaLR 275 353 -26 4 1457 398 211 141 53 chr13 114313344 114313514 -5970798 + Lx8 LINE L1 7288 7472 -1 4 1457 351 0 0 0 chr13 114313713 114313752 -5970560 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1457 544 311 70 33 chr13 114314997 114315098 -5969214 - Lx7 LINE L1 -647 7049 6942 4 1457 919 0 18 0 chr13 114315098 114315209 -5969103 + (TG)n Simple_repeat Simple_repeat 1 113 0 4 1457 544 311 70 33 chr13 114315209 114315320 -5968992 - Lx7 LINE L1 -755 6941 6829 4 1457 350 291 7 30 chr13 114316095 114316231 -5968081 - MLT1A1 LTR MaLR -2 406 259 4 1457 387 17 16 32 chr13 114316729 114316791 -5967521 + (TTTG)n Simple_repeat Simple_repeat 2 62 0 4 1457 889 214 26 88 chr13 114316791 114317017 -5967295 - ID_B1 SINE B4 -11 213 2 4 1457 219 287 44 53 chr13 114318303 114318417 -5965895 + MIRb SINE MIR 109 221 -47 4 1457 1605 202 114 16 chr13 114318846 114319224 -5965088 + MTD LTR MaLR 5 419 0 4 1457 405 0 0 0 chr13 114322847 114322892 -5961420 + (GA)n Simple_repeat Simple_repeat 2 46 0 4 1457 1296 84 17 17 chr13 114323055 114323236 -5961076 + B2_Mm2 SINE B2 1 181 -14 4 1457 376 280 80 0 chr13 114323352 114323452 -5960860 + RSINE1 SINE B4 12 119 -46 4 1457 1179 117 0 0 chr13 114323457 114323637 -5960675 + (TC)n Simple_repeat Simple_repeat 1 180 0 4 1457 224 320 48 24 chr13 114323723 114323848 -5960464 + MIRb SINE MIR 77 204 -64 4 1457 406 246 33 0 chr13 114325463 114325585 -5958727 + MLT1B LTR MaLR 265 390 0 4 1457 419 238 177 16 chr13 114325601 114325725 -5958587 - B1F1 SINE Alu -5 144 1 4 1457 754 308 25 48 chr13 114325804 114326129 -5958183 - ORR1E LTR MaLR -55 315 1 4 1457 504 246 5 129 chr13 114326129 114326315 -5957997 - ORR1E-int LTR MaLR -53 1527 1368 4 1457 450 0 0 0 chr13 114326531 114326581 -5957731 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1457 4480 201 84 49 chr13 114328128 114329134 -5955178 + RMER1B Other Other 1 1042 -24 4 1457 1396 240 31 59 chr13 114330400 114330790 -5953522 - MTE2a LTR MaLR 0 379 1 4 1457 1096 285 26 16 chr13 114330793 114331204 -5953108 + L1MA6 LINE L1 5618 6020 -136 4 1457 4466 52 0 12 chr13 114331264 114331828 -5952484 + L1Md_F2 LINE L1 6013 6569 -13 4 1457 442 229 51 83 chr13 114333168 114333249 -5951063 - MER3 DNA MER1_type -33 176 80 4 1457 709 204 41 21 chr13 114333249 114333394 -5950918 + B1_Mur1 SINE Alu 1 148 -1 4 1457 442 281 29 63 chr13 114333394 114333517 -5950795 - MER3 DNA MER1_type -83 126 8 4 1457 529 349 98 42 chr13 114333567 114333902 -5950410 + MamGypLTR1a LTR Gypsy 431 784 0 4 1457 293 304 13 0 chr13 114334097 114334176 -5950136 + ID4_ SINE ID 4 83 0 4 1457 530 296 115 16 chr13 114334216 114334460 -5949852 + L1MD2 LINE L1 5330 5597 -645 4 1457 387 263 113 9 chr13 114334485 114334600 -5949712 + RSINE1 SINE B4 4 130 -35 4 1457 635 320 48 13 chr13 114334903 114335131 -5949181 - LTR52 LTR ERVL -6 415 180 4 1457 444 252 54 0 chr13 114335143 114335254 -5949058 - LTR52 LTR ERVL -296 125 9 4 1457 266 288 56 109 chr13 114335295 114335444 -5948868 + L1MD2 LINE L1 5906 6055 -304 4 1457 1124 89 0 0 chr13 114335444 114335590 -5948722 + B1_Mus2 SINE Alu 2 147 0 4 1457 266 288 56 109 chr13 114335590 114335760 -5948552 + L1MD2 LINE L1 6056 6208 -151 4 1457 244 333 93 28 chr13 114335828 114335936 -5948376 + PB1 SINE Alu 11 125 -2 4 1457 240 235 29 0 chr13 114335946 114336014 -5948298 + ID4 SINE ID 2 71 -12 4 1457 585 286 44 44 chr13 114336014 114336263 -5948049 - L1M3 LINE L1 -357 5823 5575 4 1457 306 252 7 96 chr13 114336294 114336425 -5947887 - B3A SINE B2 0 198 80 5 1457 1833 180 27 103 chr13 114336425 114336834 -5947478 + ORR1C1 LTR MaLR 1 378 0 5 1457 396 186 0 0 chr13 114336834 114336904 -5947408 - B3A SINE B2 -126 72 3 5 1457 233 377 36 14 chr13 114336917 114337057 -5947255 + L2a LINE L2 3283 3425 -1 5 1457 318 303 60 10 chr13 114337091 114337191 -5947121 + L2c LINE L2 3260 3364 -23 5 1457 209 184 26 0 chr13 114338934 114338972 -5945340 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 5 1457 393 279 59 67 chr13 114338995 114339114 -5945198 - MER63B DNA AcHobo -2 434 317 5 1457 1472 217 125 21 chr13 114339179 114339417 -5944895 - ORR1D2 LTR MaLR -4 366 92 5 1457 2426 151 8 13 chr13 114339417 114339813 -5944499 + ORR1B1 LTR MaLR 1 394 0 5 1457 1472 217 125 21 chr13 114339813 114339903 -5944409 - ORR1D2 LTR MaLR -279 91 4 5 1457 486 0 0 0 chr13 114339903 114339957 -5944355 + (TGGA)n Simple_repeat Simple_repeat 4 57 0 5 1457 441 295 154 0 chr13 114340420 114340576 -5943736 - B3A SINE B2 -18 180 1 5 1457 493 265 132 39 chr13 114340978 114341182 -5943130 - ID_B1 SINE B4 -1 223 1 5 1457 1144 163 169 64 chr13 114343223 114343382 -5940930 - ORR1B2 LTR MaLR 0 384 218 5 1457 180 0 0 0 chr13 114343382 114343402 -5940910 + (TG)n Simple_repeat Simple_repeat 1 20 0 5 1457 555 16 0 0 chr13 114343402 114343465 -5940847 + (GA)n Simple_repeat Simple_repeat 1 64 0 5 1457 1144 163 169 64 chr13 114343465 114343587 -5940725 - ORR1B2 LTR MaLR -167 217 72 5 1457 3826 216 120 58 chr13 114343587 114344622 -5939690 - ORR1B2-int LTR MaLR 0 1370 268 5 1457 724 162 52 25 chr13 114344622 114344805 -5939507 + ORR1D1 LTR MaLR 1 152 -174 5 1457 923 291 36 20 chr13 114345105 114345406 -5938906 + MER119 DNA MER1_type 278 583 0 5 1457 576 292 45 22 chr13 114345518 114345742 -5938570 - MLT1J LTR MaLR -283 229 1 5 1457 2266 138 30 35 chr13 114346264 114346318 -5937994 - ORR1B2 LTR MaLR 0 367 321 5 1457 2236 115 17 25 chr13 114346318 114346676 -5937636 - RLTR15 LTR ERVK -4 355 1 5 1457 2266 138 30 35 chr13 114346676 114346990 -5937322 - ORR1B2 LTR MaLR -47 320 1 5 1457 846 285 90 81 chr13 114347250 114347685 -5936627 + RMER13A LTR ERVK 1 439 -421 5 1457 232 231 19 0 chr13 114348105 114348157 -5936155 - LTR85b LTR Gypsy? -246 538 486 5 1457 1054 75 0 0 chr13 114348227 114348361 -5935951 + B1_Mus1 SINE Alu 15 148 0 5 1457 227 143 41 0 chr13 114348361 114348410 -5935902 + GA-rich Low_complexity Low_complexity 4 54 0 5 1457 1648 36 5 0 chr13 114348457 114348649 -5935663 - B2_Mm1a SINE B2 0 193 1 5 1457 1305 158 221 14 chr13 114348855 114349131 -5935181 + ORR1B1 LTR MaLR 1 333 -61 5 1457 360 85 0 0 chr13 114349136 114349174 -5935138 + (T)n Simple_repeat Simple_repeat 1 38 0 5 1457 1265 41 0 0 chr13 114349174 114349321 -5934991 - B1_Mm SINE Alu 0 147 1 5 1457 360 85 0 0 chr13 114349321 114349341 -5934971 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1457 352 219 0 0 chr13 114349341 114349414 -5934898 + ORR1B1 LTR MaLR 322 394 0 5 1457 238 313 64 58 chr13 114350601 114350757 -5933555 - MIRb SINE MIR -56 212 56 5 1457 845 170 20 20 chr13 114350847 114350997 -5933315 - B1_Mur4 SINE Alu 0 150 1 5 1457 1145 74 0 26 chr13 114351022 114351174 -5933138 - B1_Mus1 SINE Alu 0 148 1 5 1457 1416 194 88 29 chr13 114351499 114351839 -5932473 - ORR1D2 LTR MaLR -10 360 1 5 1457 2159 97 18 30 chr13 114351999 114352328 -5931984 - IAPLTR2b LTR ERVK -2 325 1 5 1457 7252 31 3 16 chr13 114352330 114353191 -5931121 - IAPEz-int LTR ERVK -2 6479 5630 5 1457 22721 75 32 18 chr13 114353177 114356210 -5928102 - IAPEz-int LTR ERVK -3405 3076 3 5 1457 2159 97 18 30 chr13 114356210 114356539 -5927773 - IAPLTR2b LTR ERVK -2 325 1 5 1457 639 39 0 0 chr13 114356615 114356693 -5927619 + (TTTTC)n Simple_repeat Simple_repeat 3 80 0 5 1457 370 86 42 14 chr13 114357586 114357657 -5926655 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 5 1457 1809 230 14 44 chr13 114358178 114358269 -5926043 + MTD LTR MaLR 19 106 -313 5 1457 563 240 7 58 chr13 114358269 114358424 -5925888 - B1_Mur3 SINE Alu -2 147 1 5 1457 1809 230 14 44 chr13 114358424 114358745 -5925567 + MTD LTR MaLR 107 419 0 5 1457 307 202 0 23 chr13 114359166 114359252 -5925060 + (TA)n Simple_repeat Simple_repeat 2 85 0 5 1457 213 39 0 0 chr13 114359409 114359435 -5924877 + (TAA)n Simple_repeat Simple_repeat 2 27 0 5 1457 225 94 0 0 chr13 114360274 114360306 -5924006 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1457 649 225 35 0 chr13 114360310 114360452 -5923860 - B1_Mus2 SINE Alu 0 147 1 5 1457 512 266 108 37 chr13 114360883 114361152 -5923160 + B4A SINE B4 1 288 -4 5 1457 243 181 27 14 chr13 114361166 114361239 -5923073 + (CA)n Simple_repeat Simple_repeat 1 74 0 5 1457 234 150 0 0 chr13 114361581 114361621 -5922691 + (GGAGAA)n Simple_repeat Simple_repeat 1 40 0 5 1457 624 91 0 0 chr13 114361634 114361722 -5922590 + (GGAA)n Simple_repeat Simple_repeat 4 91 0 5 1457 22 0 0 0 chr13 114361958 114361980 -5922332 + AT_rich Low_complexity Low_complexity 1 22 0 5 1457 182 220 77 39 chr13 114362053 114362105 -5922207 + L2c LINE L2 3314 3367 -20 5 1457 441 0 0 0 chr13 114362951 114363000 -5921312 + (TG)n Simple_repeat Simple_repeat 2 50 0 5 1457 421 301 67 69 chr13 114363406 114363656 -5920656 - ORR1E LTR MaLR -86 288 44 5 1457 940 314 136 29 chr13 114363671 114364121 -5920191 + MLT1G LTR MaLR 91 588 -3 5 1457 333 250 0 0 chr13 114365505 114365613 -5918699 + (CA)n Simple_repeat Simple_repeat 1 108 0 5 1457 200 194 0 0 chr13 114365613 114365649 -5918663 + (TATG)n Simple_repeat Simple_repeat 3 38 0 5 1457 215 225 14 0 chr13 114365662 114365733 -5918579 + (CA)n Simple_repeat Simple_repeat 2 73 0 5 1457 238 294 0 81 chr13 114366263 114366337 -5917975 + MLT1J2 LTR MaLR 284 351 -97 5 1457 691 285 97 16 chr13 114366953 114367210 -5917102 - B4A SINE B4 -6 286 9 5 1457 236 186 47 0 chr13 114367218 114367261 -5917051 + RMER30 DNA MER1_type 7 51 -151 5 1457 585 248 8 0 chr13 114367273 114367394 -5916918 + MTE2a LTR MaLR 1 122 -257 5 1457 749 275 163 55 chr13 114368318 114368772 -5915540 + MLT1D LTR MaLR 1 503 -2 5 1457 290 59 0 56 chr13 114370135 114370189 -5914123 + (T)n Simple_repeat Simple_repeat 1 51 0 5 1457 218 271 0 0 chr13 114370539 114370587 -5913725 + GA-rich Low_complexity Low_complexity 4 51 0 5 1457 396 270 8 50 chr13 114370712 114370833 -5913479 - PB1D7 SINE Alu 0 120 5 5 1457 511 259 13 71 chr13 114370858 114371012 -5913300 - ID_B1 SINE B4 -1 223 79 5 1457 1284 86 35 65 chr13 114371316 114371516 -5912796 + B2_Mm2 SINE B2 2 195 0 5 1457 306 282 115 63 chr13 114371602 114371776 -5912536 - L1MB2 LINE L1 -125 6046 5864 5 1457 810 294 86 59 chr13 114372585 114373074 -5911238 + MLT1D LTR MaLR 1 502 -3 5 1457 288 0 0 0 chr13 114373110 114373142 -5911170 + (CCA)n Simple_repeat Simple_repeat 1 32 0 5 1457 520 287 33 52 chr13 114374327 114374540 -5909772 + MamRep4096 DNA hAT? 88 296 -130 5 1457 865 186 38 1 chr13 114374552 114374737 -5909575 + URR1B DNA MER1_type 7 217 -8 5 1457 2148 137 20 3 chr13 114374737 114375086 -5909226 + RLTR20D LTR ERVK 2 477 -91 5 1457 486 0 0 0 chr13 114375086 114375140 -5909172 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1457 363 291 113 20 chr13 114375140 114375232 -5909080 + RLTR20D LTR ERVK 478 567 -1 5 1457 213 284 53 26 chr13 114375366 114375442 -5908870 - MER5B DNA MER1_type -26 152 75 5 1457 794 161 78 67 chr13 114375473 114375666 -5908646 - B3A SINE B2 -2 196 2 5 1457 324 143 0 0 chr13 114375796 114375866 -5908446 + (A)n Simple_repeat Simple_repeat 1 70 0 5 1457 270 281 62 98 chr13 114376597 114376873 -5907439 + L2a LINE L2 2811 3076 -343 5 1457 212 321 155 16 chr13 114376916 114377109 -5907203 + L2a LINE L2 3145 3364 -62 5 1457 384 295 139 13 chr13 114379455 114379606 -5904706 + RMER30 DNA MER1_type 21 190 -12 5 1457 207 270 98 13 chr13 114379785 114379879 -5904433 - MIR SINE MIR -146 122 24 5 1457 1339 87 32 0 chr13 114380160 114380345 -5903967 + B2_Mm1a SINE B2 2 192 -1 5 1457 26 0 0 0 chr13 114382981 114383007 -5901305 + AT_rich Low_complexity Low_complexity 1 26 0 5 1457 342 67 0 0 chr13 114385100 114385145 -5899167 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1457 553 225 27 47 chr13 114386681 114386830 -5897482 - B1_Mur1 SINE Alu -2 147 2 5 1457 491 335 70 46 chr13 114388195 114388480 -5895832 - B4A SINE B4 0 292 1 5 1457 219 241 37 0 chr13 114389135 114389189 -5895123 + PB1D10 SINE Alu 53 108 -9 5 1457 254 278 0 0 chr13 114390657 114390729 -5893583 + L1M2 LINE L1 5749 5820 -480 5 1457 394 271 71 143 chr13 114390737 114390961 -5893351 + B4A SINE B4 1 208 -84 5 1457 21 0 0 0 chr13 114391091 114391112 -5893200 + AT_rich Low_complexity Low_complexity 1 21 0 5 1457 1435 160 189 31 chr13 114391662 114391788 -5892524 + ORR1B2 LTR MaLR 1 138 -229 5 1457 837 138 80 0 chr13 114391788 114391926 -5892386 + B1_Mur4 SINE Alu 1 149 -1 5 1457 1435 160 189 31 chr13 114391926 114392116 -5892196 + ORR1B2 LTR MaLR 139 367 0 5 1457 506 137 0 0 chr13 114392289 114392362 -5891950 - ORR1B2 LTR MaLR -284 83 11 5 1457 375 241 41 49 chr13 114392716 114392838 -5891474 + ID_B1 SINE B4 96 216 -8 5 1457 346 264 0 22 chr13 114394278 114394367 -5889945 - PB1D10 SINE Alu -7 110 24 5 1457 399 198 55 36 chr13 114396182 114396292 -5888020 + PB1D10 SINE Alu 5 116 -1 5 1457 299 291 97 0 chr13 114396862 114396965 -5887347 + MIRc SINE MIR 15 127 -141 5 1457 232 265 59 0 chr13 114397148 114397216 -5887096 + MLT1C LTR MaLR 191 262 -205 5 1457 417 262 18 27 chr13 114397579 114397689 -5886623 - MER58D DNA MER1_type -1 385 277 5 1457 902 78 0 0 chr13 114398261 114398377 -5885935 + B1_Mus2 SINE Alu 21 136 -11 5 1457 593 138 41 0 chr13 114398398 114398521 -5885791 + RMER17B LTR ERVK 337 464 -494 5 1457 304 338 124 38 chr13 114399652 114400083 -5884229 + L2a LINE L2 2788 3249 -177 5 1457 342 0 0 0 chr13 114400083 114400121 -5884191 + (TG)n Simple_repeat Simple_repeat 2 39 0 5 1457 304 336 139 26 chr13 114400121 114400268 -5884044 + L2a LINE L2 3250 3420 -6 5 1457 532 302 142 94 chr13 114400466 114400817 -5883495 + MTEa LTR MaLR 4 371 -8 5 1457 305 314 97 28 chr13 114404416 114404560 -5879752 + MER3 DNA MER1_type 1 154 -55 5 1457 189 121 0 0 chr13 114404717 114404750 -5879562 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1457 32 0 0 0 chr13 114408770 114408802 -5875510 + GC_rich Low_complexity Low_complexity 1 32 0 5 1457 192 75 54 54 chr13 114409034 114409090 -5875222 + T-rich Low_complexity Low_complexity 5 60 0 6 1457 275 262 99 61 chr13 114409445 114409626 -5874686 + MIRb SINE MIR 13 200 -62 6 1457 2858 259 76 44 chr13 114410845 114411346 -5872966 + RCHARR1 DNA MER1_type 1 528 -446 6 1457 971 166 7 0 chr13 114411346 114411491 -5872821 + B1_Mus2 SINE Alu 1 146 -1 6 1457 2858 259 76 44 chr13 114411491 114411905 -5872407 + RCHARR1 DNA MER1_type 529 946 -28 6 1457 304 260 64 64 chr13 114411918 114412074 -5872238 + CYRA11_Mm Unknown Y-chromosome 165 320 -297 6 1457 735 167 72 13 chr13 114411937 114412089 -5872223 - URR1A DNA MER1_type -7 219 59 6 1457 255 286 131 0 chr13 114412504 114412588 -5871724 + MLT1J1 LTR MaLR 336 430 -14 6 1457 228 35 0 0 chr13 114412597 114412626 -5871686 + (TCCC)n Simple_repeat Simple_repeat 1 29 0 6 1457 209 331 194 6 chr13 114412648 114412818 -5871494 + L2a LINE L2 3225 3426 0 6 1457 1580 32 16 0 chr13 114413463 114413650 -5870662 - B2_Mm1a SINE B2 -3 190 1 6 1457 825 208 0 32 chr13 114413801 114413955 -5870357 + B1_Mur2 SINE Alu 1 149 0 6 1457 1078 211 34 0 chr13 114413971 114414180 -5870132 + B3 SINE B2 1 216 0 6 1457 14515 49 2 1 chr13 114414197 114416070 -5868242 + L1Md_F3 LINE L1 3712 5586 -297 6 1457 8446 36 3 2 chr13 114416070 114417067 -5867245 + L1Md_F3 LINE L1 5587 6584 0 6 1457 383 302 31 0 chr13 114417778 114417874 -5866438 - PB1D10 SINE Alu -1 116 18 6 1457 432 273 112 55 chr13 114417973 114418244 -5866068 + MER47B DNA MER2_type 62 418 0 6 1457 536 308 9 70 chr13 114419189 114419402 -5864910 - MER21B LTR ERV1 -32 831 632 6 1457 402 232 32 0 chr13 114419591 114419686 -5864626 - MER21B LTR ERV1 -638 225 128 6 1457 430 219 40 30 chr13 114419703 114419802 -5864510 - PB1D10 SINE Alu -15 102 3 6 1457 225 0 0 0 chr13 114420602 114420627 -5863685 + (A)n Simple_repeat Simple_repeat 1 25 0 6 1457 1019 259 69 94 chr13 114422076 114422590 -5861722 - RLTR26 LTR ERVK -107 535 5 6 1457 706 277 195 13 chr13 114422781 114423099 -5861213 + MTD LTR MaLR 44 419 0 6 1457 330 204 20 10 chr13 114423101 114423200 -5861112 + (TA)n Simple_repeat Simple_repeat 2 101 0 6 1457 258 304 86 9 chr13 114423200 114423316 -5860996 - RMER12 LTR ERVK -467 855 731 6 1457 1419 252 39 0 chr13 114423575 114423880 -5860432 - MTEa LTR MaLR -60 319 3 6 1457 1259 48 0 0 chr13 114423935 114424082 -5860230 - B1_Mm SINE Alu 0 147 1 6 1457 241 318 61 108 chr13 114424771 114424835 -5859477 - LTR48 LTR ERV1 -43 744 688 6 1457 497 191 104 0 chr13 114424835 114424950 -5859362 + PB1 SINE Alu 1 127 0 6 1457 241 318 61 108 chr13 114424950 114425033 -5859279 - LTR48 LTR ERV1 -100 687 604 6 1457 248 346 90 8 chr13 114425047 114425181 -5859131 + LTR33A_ LTR ERVL 382 526 -5 6 182 606 292 85 76 chr13 114425403 114425882 -5858430 - MLT1E3 LTR MaLR -41 639 40 6 1458 236 302 40 94 chr13 114426914 114426993 -5857319 - PB1D7 SINE Alu 0 120 40 6 1458 834 203 63 200 chr13 114426993 114427454 -5856858 - RMER10B LTR ERVL 0 398 1 6 1458 232 295 30 129 chr13 114427454 114427499 -5856813 - B1F2 SINE Alu -108 41 1 6 1458 206 279 24 60 chr13 114427651 114427735 -5856577 + MIR SINE MIR 2 82 -180 6 1458 1163 268 86 34 chr13 114427742 114428067 -5856245 - MTEa LTR MaLR 0 379 38 6 1458 209 287 79 47 chr13 114428073 114428177 -5856135 + MIR SINE MIR 68 193 -75 6 1458 264 77 0 0 chr13 114428179 114428218 -5856094 + (CA)n Simple_repeat Simple_repeat 2 40 0 6 1458 627 14 0 0 chr13 114428912 114428984 -5855328 + (TG)n Simple_repeat Simple_repeat 2 73 0 6 1458 4829 102 123 7 chr13 114429844 114430585 -5853727 + Lx3B LINE L1 6147 6973 0 6 1458 225 0 0 0 chr13 114430591 114430616 -5853696 + (TAA)n Simple_repeat Simple_repeat 3 27 0 6 1458 229 270 105 48 chr13 114431655 114431760 -5852552 - MER34 LTR ERV1 -431 111 1 6 1458 1896 69 16 0 chr13 114432286 114432531 -5851781 + L1_Mus1 LINE L1 6318 6566 -1 6 1458 1386 232 88 18 chr13 114432544 114433089 -5851223 + L1_Rod LINE L1 1559 2141 -3706 6 1458 481 277 114 12 chr13 114433081 114433326 -5850986 + Lx9 LINE L1 5848 6117 -1527 6 1458 1713 173 320 2 chr13 114433430 114433858 -5850454 + RLTR12A LTR ERVK 1 564 -4 6 1458 3576 52 28 0 chr13 114435165 114435589 -5848723 - RLTR10C LTR ERVK 0 436 1 6 1458 306 0 0 0 chr13 114436397 114436431 -5847881 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 6 1458 10036 48 26 30 chr13 114437408 114439056 -5845256 - L1Md_F2 LINE L1 -12 6570 4881 6 1458 226 183 46 77 chr13 114439056 114439121 -5845191 + RMER20A LTR ERVK 186 248 -268 6 1458 10036 48 26 30 chr13 114439121 114439572 -5844740 - L1Md_F2 LINE L1 -12 4880 4417 6 1458 3126 33 2 116 chr13 114439572 114440012 -5844300 - RLTR10 LTR ERVK 0 390 1 6 1458 15875 36 11 4 chr13 114440014 114442067 -5842245 - RLTR10-int LTR ERVK -3 1984 9 6 1458 2287 72 17 83 chr13 114442068 114442418 -5841894 - RLTR10 LTR ERVK 0 327 1 6 1458 4517 49 5 2 chr13 114442419 114443015 -5841297 - L1_Mm LINE L1 -1462 4421 3824 6 1458 2089 150 0 85 chr13 114443284 114443662 -5840650 - ORR1B1 LTR MaLR -1 393 48 6 1458 393 332 75 70 chr13 114444901 114445300 -5839012 + MLT1A1 LTR MaLR 8 408 0 6 1458 324 0 0 0 chr13 114446654 114446690 -5837622 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 6 1458 235 310 0 33 chr13 114448090 114448180 -5836132 + MTEb LTR MaLR 278 364 -15 6 1458 204 97 0 0 chr13 114449766 114449797 -5834515 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 6 1458 618 258 43 58 chr13 114450903 114451249 -5833063 + RLTR15 LTR ERVK 2 342 -17 6 1458 251 294 29 0 chr13 114451290 114451358 -5832954 - LTR33 LTR ERVL -348 167 98 6 1458 3704 46 4 0 chr13 114454559 114455020 -5829292 - L1Md_F2 LINE L1 -1484 4399 3937 6 1458 9444 59 0 2 chr13 114455016 114456182 -5828130 + L1Md_F2 LINE L1 4423 5586 -297 6 1458 8278 48 0 4 chr13 114456183 114457182 -5827130 + L1Md_F2 LINE L1 5588 6582 0 6 1458 180 0 0 0 chr13 114457478 114457498 -5826814 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1458 285 29 0 0 chr13 114458141 114458175 -5826137 + (TC)n Simple_repeat Simple_repeat 2 35 0 6 1458 2167 181 175 17 chr13 114458839 114459606 -5824706 + RMER19B LTR ERVK 1 888 -14 6 1458 246 160 0 0 chr13 114459636 114459686 -5824626 + (CA)n Simple_repeat Simple_repeat 2 51 0 6 1458 303 85 0 0 chr13 114460425 114460472 -5823840 + (TC)n Simple_repeat Simple_repeat 2 48 0 6 1458 376 309 16 8 chr13 114461563 114461690 -5822622 + ORR1E LTR MaLR 22 149 -210 6 1458 180 0 0 0 chr13 114461917 114461937 -5822375 + (TTTG)n Simple_repeat Simple_repeat 4 23 0 6 1458 297 360 36 14 chr13 114462747 114462885 -5821427 - LTR33 LTR ERVL -133 382 242 6 1458 1048 96 33 0 chr13 114463108 114463647 -5820665 + (CCAA)n Simple_repeat Simple_repeat 1 557 0 6 1458 384 119 0 0 chr13 114464181 114464240 -5820072 + (TCTG)n Simple_repeat Simple_repeat 2 60 0 6 1458 285 319 107 27 chr13 114464669 114464856 -5819456 - L1MC4 LINE L1 -1142 6900 6699 6 1458 547 276 55 7 chr13 114464975 114465121 -5819191 - RSINE1 SINE B4 -11 154 2 6 1458 2495 89 3 0 chr13 114465558 114465884 -5818428 - ORR1A2 LTR MaLR 0 327 1 6 1458 350 294 52 60 chr13 114465890 114466006 -5818306 + MLT1E1A LTR MaLR 3 117 -563 6 1458 813 305 12 8 chr13 114466017 114466275 -5818037 - B4A SINE B4 -20 272 14 6 1458 316 282 130 40 chr13 114466351 114466528 -5817784 + MLT1E1A LTR MaLR 298 490 -164 6 1458 518 184 83 0 chr13 114466596 114466705 -5817607 + B3A SINE B2 2 119 -79 6 1458 199 225 14 14 chr13 114466729 114466801 -5817511 + CT-rich Low_complexity Low_complexity 4 75 0 6 1458 221 163 0 20 chr13 114467622 114467672 -5816640 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1458 357 43 0 0 chr13 114467744 114467791 -5816521 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 6 1458 3835 150 43 11 chr13 114467855 114468509 -5815803 - RLTR33 LTR ERVK -3 675 1 6 1458 1256 84 0 6 chr13 114468687 114468867 -5815445 + (TTTCC)n Simple_repeat Simple_repeat 2 180 0 6 1458 293 306 0 20 chr13 114469439 114469539 -5814773 + PB1D10 SINE Alu 1 98 -19 6 1458 291 28 0 0 chr13 114469539 114469575 -5814737 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6 1458 1337 172 40 14 chr13 114469816 114470094 -5814218 + RMER5 LTR ERV1 224 508 -26 6 1458 512 242 0 99 chr13 114470109 114470230 -5814082 + B3A SINE B2 55 163 -35 6 1458 198 0 0 0 chr13 114470230 114470252 -5814060 + (CATG)n Simple_repeat Simple_repeat 1 22 0 6 1458 512 242 0 99 chr13 114470252 114470272 -5814040 + B3A SINE B2 164 182 -16 6 1458 1519 159 84 6 chr13 114470590 114470901 -5813411 + ORR1C1 LTR MaLR 1 335 -43 6 1458 371 282 15 75 chr13 114471236 114471370 -5812942 + RMER10B LTR ERVL 262 387 -11 6 1458 290 297 13 13 chr13 114471484 114471559 -5812753 - ID4 SINE ID 0 83 9 6 1458 479 276 23 52 chr13 114471570 114471742 -5812570 + MLT1F LTR MaLR 382 548 0 6 1458 265 302 84 84 chr13 114471743 114471929 -5812383 + MLT1F-int LTR MaLR 31 214 -1275 6 1458 5601 58 3 1 chr13 114471929 114472625 -5811687 + L1Md_F2 LINE L1 5886 6582 0 6 1458 265 302 84 84 chr13 114472625 114472713 -5811599 + MLT1F-int LTR MaLR 215 305 -1184 6 1458 327 355 43 0 chr13 114472805 114472946 -5811366 + MLT1F-int LTR MaLR 1279 1425 -64 6 1458 549 318 170 28 chr13 114474159 114474589 -5809723 + MLT1F LTR MaLR 34 524 -24 6 1458 309 154 138 0 chr13 114475348 114475413 -5808899 + ID_B1 SINE B4 123 196 -28 6 1458 515 228 139 13 chr13 114475792 114475943 -5808369 - B3 SINE B2 -43 173 4 6 1458 180 97 0 0 chr13 114476124 114476155 -5808157 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 6 1458 216 0 0 0 chr13 114476205 114476229 -5808083 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 6 1458 362 376 76 18 chr13 114476635 114476860 -5807452 + LTR16E2 LTR ERVL 315 552 -16 6 1458 297 388 7 7 chr13 114478237 114478372 -5805940 + LTR33 LTR ERVL 88 222 -293 6 1458 1661 119 4 4 chr13 114478475 114478719 -5805593 - L1_Mm LINE L1 -355 5528 5285 6 1458 5527 107 20 7 chr13 114478716 114479553 -5804759 - L1_Mur2 LINE L1 -1271 4606 3759 6 1458 985 102 64 29 chr13 114479558 114479730 -5804582 + B2_Mm2 SINE B2 17 194 -1 6 1458 213 39 0 0 chr13 114479730 114479756 -5804556 + (GA)n Simple_repeat Simple_repeat 1 26 0 6 1458 645 49 0 0 chr13 114479757 114479838 -5804474 + (GAAAA)n Simple_repeat Simple_repeat 5 85 0 6 1458 182 310 85 12 chr13 114480557 114480682 -5803630 - MIR SINE MIR -23 245 103 6 1458 22 56 0 0 chr13 114481450 114481486 -5802826 + AT_rich Low_complexity Low_complexity 1 36 0 6 1458 22 0 0 0 chr13 114482426 114482448 -5801864 + AT_rich Low_complexity Low_complexity 1 22 0 6 1458 511 306 110 40 chr13 114482546 114482818 -5801494 + B4A SINE B4 2 292 0 7 1458 853 194 11 0 chr13 114482818 114483183 -5801129 + (CATA)n Simple_repeat Simple_repeat 1 369 0 7 1458 642 345 22 47 chr13 114484185 114484462 -5799850 + B4A SINE B4 1 270 -22 7 1458 489 17 0 0 chr13 114484475 114484533 -5799779 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 7 1458 998 73 73 0 chr13 114484717 114484854 -5799458 + B1_Mus1 SINE Alu 2 148 0 7 1458 180 111 0 0 chr13 114484855 114484882 -5799430 + (A)n Simple_repeat Simple_repeat 1 27 0 7 1458 502 255 18 113 chr13 114484882 114485050 -5799262 + MER2B DNA MER2_type 182 333 -3 7 1458 1869 167 21 52 chr13 114485585 114485971 -5798341 + ORR1D1 LTR MaLR 1 374 0 7 1458 443 267 14 166 chr13 114487408 114487619 -5796693 - MTE2a LTR MaLR -195 184 6 7 1458 2838 110 36 27 chr13 114487944 114488393 -5795919 + RLTR11B LTR ERVK 1 453 0 7 1458 493 158 0 0 chr13 114488396 114488472 -5795840 - tRNA-Lys-AAG tRNA tRNA 0 76 1 7 1458 283 303 11 69 chr13 114489507 114489695 -5794617 - L1MC5 LINE L1 -143 7818 7642 7 1458 225 246 0 32 chr13 114490402 114490465 -5793847 + L1MC5 LINE L1 7311 7371 -590 7 1458 396 0 0 0 chr13 114490658 114490702 -5793610 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 7 1458 282 310 32 72 chr13 114490702 114490827 -5793485 - RMER10B LTR ERVL -10 388 269 7 1458 734 327 36 33 chr13 114492443 114492750 -5791562 - MLT1E2 LTR MaLR -2 625 318 7 1458 490 299 76 5 chr13 114493048 114493233 -5791079 - B3A SINE B2 0 198 1 7 1458 1117 73 0 0 chr13 114493888 114494025 -5790287 + B1_Mm SINE Alu 1 137 -10 7 1458 423 0 0 0 chr13 114494025 114494072 -5790240 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 7 1458 2081 173 24 11 chr13 114494114 114494483 -5789829 + ORR1D1 LTR MaLR 1 374 0 7 1458 554 267 120 65 chr13 114494955 114495334 -5788978 + RLTR26 LTR ERVK 1 430 -212 7 1458 320 324 232 16 chr13 114496442 114496756 -5787556 + Tigger9a DNA Tigger 276 657 -75 7 1458 832 269 35 56 chr13 114496939 114497223 -5787089 + B4A SINE B4 1 278 -14 7 1458 190 56 27 27 chr13 114497228 114497265 -5787047 + (CA)n Simple_repeat Simple_repeat 1 37 0 7 1458 1175 81 0 0 chr13 114498326 114498474 -5785838 + B1_Mus1 SINE Alu 1 148 0 7 1458 21 71 0 0 chr13 114498708 114498750 -5785562 + AT_rich Low_complexity Low_complexity 1 42 0 7 1458 1025 72 0 0 chr13 114498999 114499137 -5785175 + B1_Mus1 SINE Alu 5 142 -6 7 1458 429 228 51 76 chr13 114499004 114499161 -5785151 + B4A SINE B4 94 246 -46 7 1458 324 48 0 0 chr13 114499161 114499203 -5785109 + (GGA)n Simple_repeat Simple_repeat 1 42 0 7 1458 1656 41 18 5 chr13 114499778 114500000 -5784312 - MTB LTR MaLR 0 400 176 7 1458 1201 88 0 12 chr13 114500000 114500173 -5784139 - MTA_Mm LTR MaLR -225 171 1 1 1458 870 10 0 0 chr13 114501191 114501290 -5783022 + (GGAAA)n Simple_repeat Simple_repeat 5 103 0 2 1458 708 45 0 0 chr13 114501296 114501384 -5782928 + (GAAA)n Simple_repeat Simple_repeat 1 88 0 3 1458 540 282 209 9 chr13 114502105 114502316 -5781996 - MLT1F1 LTR MaLR 0 569 317 4 1458 2477 89 3 38 chr13 114502404 114502743 -5781569 - ORR1A2 LTR MaLR 0 327 1 5 1458 1013 289 150 89 chr13 114502811 114503600 -5780712 - MLT1F1-int LTR MaLR 0 1489 653 4 1458 226 341 20 75 chr13 114503590 114503736 -5780576 + MLT1A1 LTR MaLR 6 143 -265 6 1458 236 278 99 40 chr13 114503850 114503951 -5780361 + ORR1B1 LTR MaLR 288 394 0 7 1458 1335 300 72 14 chr13 114503951 114504471 -5779841 - MLT1F1-int LTR MaLR -835 654 58 4 1458 640 308 38 91 chr13 114504495 114504759 -5779553 - MLT1F1 LTR MaLR -5 564 315 4 1458 189 0 0 0 chr13 114504815 114504836 -5779476 + (T)n Simple_repeat Simple_repeat 1 21 0 8 1458 1296 14 14 0 chr13 114504839 114504980 -5779332 - B1_Mm SINE Alu -4 143 1 9 1458 241 319 0 14 chr13 114505608 114505681 -5778631 - MER5A DNA MER1_type -110 79 8 1 1458 267 213 83 0 chr13 114505860 114505927 -5778385 - MIRb SINE MIR -191 77 3 1 1458 3184 30 8 8 chr13 114505995 114506360 -5777952 - L1Md_F3 LINE L1 0 6584 6220 1 1458 700 268 62 16 chr13 114506360 114506553 -5777759 + B4 SINE B4 73 274 -18 1 1458 366 61 0 0 chr13 114506556 114506605 -5777707 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1458 447 301 45 128 chr13 114507536 114507871 -5776441 + MER20B DNA MER1_type 82 388 -395 1 1458 343 218 144 33 chr13 114508025 114508115 -5776197 - PB1D10 SINE Alu -8 109 10 1 1458 308 205 122 49 chr13 114508042 114508124 -5776188 - ID_B1 SINE B4 -54 170 83 1 1458 824 280 128 0 chr13 114508268 114508486 -5775826 + B4A SINE B4 1 246 -46 1 1458 261 83 0 0 chr13 114508585 114508621 -5775691 + (CATA)n Simple_repeat Simple_repeat 4 39 0 1 1458 2155 84 32 16 chr13 114508621 114508937 -5775375 + RLTRETN_Mm LTR ERVK 2 322 0 2 1458 25861 31 11 11 chr13 114508937 114513846 -5770466 + MMETn-int LTR ERVK 1 4844 0 2 1458 2152 84 32 16 chr13 114513846 114514162 -5770150 + RLTRETN_Mm LTR ERVK 1 321 -1 2 1458 693 92 0 0 chr13 114514162 114514260 -5770052 + (CATA)n Simple_repeat Simple_repeat 4 101 0 2 1458 181 244 44 0 chr13 114514483 114514528 -5769784 + L3 LINE CR1 3808 3854 -635 2 1458 2119 130 14 33 chr13 114515185 114515544 -5768768 + ORR1B1 LTR MaLR 41 392 -2 2 1458 634 248 15 8 chr13 114516123 114516257 -5768055 - RSINE1 SINE B4 -26 139 5 2 1458 785 286 10 30 chr13 114516475 114516677 -5767635 - B3A SINE B2 0 198 1 2 1458 275 283 0 0 chr13 114516954 114517014 -5767298 - MER5A DNA MER1_type -61 128 69 2 1458 1065 58 0 14 chr13 114517019 114517159 -5767153 - B1_Mus1 SINE Alu -2 146 9 2 1458 593 197 43 98 chr13 114517022 114517185 -5767127 - B4 SINE B4 -69 223 70 2 1458 261 0 0 0 chr13 114517262 114517291 -5767021 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2 1458 433 299 169 14 chr13 114517747 114517954 -5766358 + RMER15 LTR ERVL 337 575 0 3 1458 524 316 96 0 chr13 114518929 114519065 -5765247 + RSINE1 SINE B4 4 152 -13 3 1458 206 342 39 26 chr13 114519248 114519326 -5764986 + MER5B DNA MER1_type 99 177 -1 3 1458 474 284 94 5 chr13 114519398 114519589 -5764723 - MER3 DNA MER1_type -1 208 1 3 1458 412 296 162 6 chr13 114520517 114520677 -5763635 - MIR SINE MIR -41 221 37 3 1458 186 0 28 56 chr13 114520892 114520928 -5763384 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 3 1458 664 249 51 23 chr13 114521522 114521670 -5762642 + B3A SINE B2 1 154 -44 3 1458 1170 78 0 0 chr13 114521670 114521850 -5762462 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1458 664 249 51 23 chr13 114521850 114521878 -5762434 + B3A SINE B2 155 182 -16 3 1458 1170 55 0 16 chr13 114521888 114522071 -5762241 + (CA)n Simple_repeat Simple_repeat 1 180 0 3 1458 235 250 257 29 chr13 114522415 114522555 -5761757 - L1MC1 LINE L1 -103 6230 6059 3 1458 1889 265 72 44 chr13 114522611 114523125 -5761187 - L1MC1 LINE L1 -1 6332 5830 4 1458 732 276 71 0 chr13 114523125 114523321 -5760991 - ID_B1 SINE B4 -12 212 3 4 1458 1889 265 72 44 chr13 114523321 114523505 -5760807 - L1MC1 LINE L1 -504 5829 5616 4 1458 3371 58 20 5 chr13 114523648 114524049 -5760263 - MTB_Mm LTR MaLR 0 407 1 4 1458 554 292 104 68 chr13 114524049 114524358 -5759954 - MLT1A0 LTR MaLR -45 320 1 4 1458 929 159 4 0 chr13 114524755 114525458 -5758854 + (CA)n Simple_repeat Simple_repeat 1 706 0 4 1458 1257 55 7 0 chr13 114527765 114527911 -5756401 + B1_Mus1 SINE Alu 1 147 -1 4 1458 1029 99 0 0 chr13 114528936 114529088 -5755224 + (CAT)n Simple_repeat Simple_repeat 2 153 0 4 1458 710 206 34 54 chr13 114529440 114529589 -5754723 - RSINE1 SINE B4 -16 149 4 4 1458 5224 83 25 0 chr13 114530139 114531131 -5753181 - L1VL2 LINE L1 -2315 1300 281 4 1458 524 258 16 179 chr13 114531364 114531579 -5752733 + L1M4c LINE L1 206 401 -5983 4 1458 1202 78 0 0 chr13 114531579 114531721 -5752591 + B1_Mus1 SINE Alu 2 143 -5 5 1458 524 258 16 179 chr13 114531721 114531812 -5752500 + L1M4c LINE L1 402 462 -5922 4 1458 1691 275 82 62 chr13 114531888 114532647 -5751665 + Lx8 LINE L1 6700 7473 0 5 1458 247 188 0 20 chr13 114532660 114532709 -5751603 + L1M4c LINE L1 545 592 -5792 4 1458 482 272 43 40 chr13 114532893 114533185 -5751127 + L1M4c LINE L1 3378 3653 -2430 4 1458 712 301 44 127 chr13 114533181 114533342 -5750970 + Lx8 LINE L1 6656 6784 -912 5 1458 194 0 39 0 chr13 114533342 114533368 -5750944 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5 1458 712 301 44 127 chr13 114533368 114533386 -5750926 + Lx8 LINE L1 6785 6795 -901 5 1458 1338 47 0 0 chr13 114533386 114533534 -5750778 - B1_Mus1 SINE Alu 0 148 1 5 1458 1752 290 40 74 chr13 114533534 114534068 -5750244 + Lx8 LINE L1 6795 7348 -125 5 1458 701 260 14 0 chr13 114534068 114534205 -5750107 + B1_Mur1 SINE Alu 2 140 -9 5 1458 405 0 0 0 chr13 114534205 114534250 -5750062 + (CA)n Simple_repeat Simple_repeat 2 46 0 5 1458 1752 290 40 74 chr13 114534258 114534425 -5749887 + Lx8 LINE L1 7349 7471 -2 5 1458 1402 271 141 19 chr13 114534436 114534608 -5749704 + L1M4c LINE L1 3673 3878 -2498 4 1458 1997 187 30 11 chr13 114534608 114534975 -5749337 - ORR1D1 LTR MaLR 0 374 1 5 1458 1402 271 141 19 chr13 114534975 114535498 -5748814 + L1M4c LINE L1 3879 4453 -1923 4 1458 1791 162 45 45 chr13 114535553 114535677 -5748635 + ORR1D1 LTR MaLR 1 127 -247 5 1458 596 272 173 37 chr13 114535677 114536001 -5748311 + RLTR9A LTR ERVK 1 368 0 5 1458 1791 162 45 45 chr13 114536001 114536250 -5748062 + ORR1D1 LTR MaLR 128 374 0 5 1458 307 211 0 27 chr13 114536311 114536384 -5747928 + L1M4c LINE L1 4532 4602 -1777 4 1458 754 162 6 13 chr13 114536487 114536643 -5747669 + C-rich Low_complexity Low_complexity 5 159 0 6 1458 634 287 100 19 chr13 114536672 114536931 -5747381 - B4A SINE B4 -4 288 9 6 1458 314 282 155 42 chr13 114536963 114537251 -5747061 + L1MB5 LINE L1 5709 6031 -143 6 1458 1616 307 49 9 chr13 114537253 114537884 -5746428 + Lx9 LINE L1 2374 3029 -3114 6 1458 923 243 83 4 chr13 114537875 114538115 -5746197 + L1_Mur3 LINE L1 3854 4112 -1768 6 1458 378 0 0 0 chr13 114538164 114538206 -5746106 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1458 453 81 0 0 chr13 114538226 114538288 -5746024 + (GGAAA)n Simple_repeat Simple_repeat 1 62 0 6 1458 845 269 102 49 chr13 114538288 114538354 -5745958 + Lx9 LINE L1 4876 4933 -1210 6 1458 2413 73 75 13 chr13 114538354 114538660 -5745652 - ORR1A2 LTR MaLR 0 327 3 6 1458 845 269 102 49 chr13 114538660 114539065 -5745247 + Lx9 LINE L1 4903 5369 -774 6 1458 489 17 0 0 chr13 114539065 114539123 -5745189 + (CA)n Simple_repeat Simple_repeat 2 59 0 6 1458 564 311 135 39 chr13 114539123 114539301 -5745011 + Lx9 LINE L1 5360 5556 -324 6 1458 490 293 18 164 chr13 114539681 114540018 -5744294 + L1_Rod LINE L1 5535 5807 -40 6 1458 578 290 170 61 chr13 114539996 114540731 -5743581 + Lx9 LINE L1 5561 6481 -1163 6 1458 1286 152 0 0 chr13 114540739 114540936 -5743376 + URR1B DNA MER1_type 29 225 0 7 1458 2307 298 94 45 chr13 114540938 114541313 -5742999 + Lx9 LINE L1 6471 6876 -768 6 1458 2134 130 14 58 chr13 114541313 114541657 -5742655 - ORR1A4 LTR MaLR 0 329 1 7 1458 2307 298 94 45 chr13 114541657 114542363 -5741949 + Lx9 LINE L1 6877 7605 -39 6 1458 404 167 12 60 chr13 114543062 114543145 -5741167 - ID4 SINE ID -2 81 3 7 1458 610 267 152 40 chr13 114543215 114543465 -5740847 + RMER20B LTR ERVK 10 287 -340 7 1458 1098 95 0 0 chr13 114543506 114543643 -5740669 + B1_Mus1 SINE Alu 2 138 -10 7 1458 342 0 0 0 chr13 114543646 114543684 -5740628 + (TAA)n Simple_repeat Simple_repeat 2 39 0 7 1458 231 36 0 0 chr13 114543690 114543718 -5740594 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 7 1458 423 0 0 0 chr13 114544302 114544349 -5739963 + (CA)n Simple_repeat Simple_repeat 2 48 0 7 1458 219 36 0 0 chr13 114544358 114544386 -5739926 + (GA)n Simple_repeat Simple_repeat 2 29 0 7 1458 443 270 107 21 chr13 114544601 114544741 -5739571 + RSINE1 SINE B4 4 155 -10 7 1458 22 56 0 0 chr13 114544747 114544783 -5739529 + AT_rich Low_complexity Low_complexity 1 36 0 8 1458 871 227 207 28 chr13 114546045 114546335 -5737977 - MTEb LTR MaLR 0 379 38 8 1458 837 76 0 0 chr13 114546338 114546456 -5737856 + (TG)n Simple_repeat Simple_repeat 1 118 0 8 1458 230 175 0 0 chr13 114546471 114546511 -5737801 - RSINE1 SINE B4 -45 120 81 8 1458 3295 63 8 5 chr13 114547000 114547399 -5736913 - MTB LTR MaLR 0 400 1 8 1458 376 356 83 55 chr13 114548376 114548518 -5735794 + LTR33C LTR ERVL 33 185 -444 8 1458 249 33 0 0 chr13 114548518 114548548 -5735764 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 8 1458 376 356 83 55 chr13 114548548 114548658 -5735654 + LTR33C LTR ERVL 186 291 -338 8 1458 694 236 47 13 chr13 114549181 114549331 -5734981 + B3A SINE B2 2 156 -42 8 1458 343 182 0 0 chr13 114550780 114550835 -5733477 - ORR1C1 LTR MaLR 0 378 324 8 1458 21 57 0 0 chr13 114550835 114550870 -5733442 + AT_rich Low_complexity Low_complexity 1 35 0 8 1458 24 77 0 0 chr13 114551175 114551227 -5733085 + AT_rich Low_complexity Low_complexity 1 52 0 9 1458 1632 190 57 66 chr13 114552333 114552683 -5731629 - ORR1C1 LTR MaLR -31 347 1 8 1458 224 195 0 0 chr13 114552683 114552724 -5731588 - B4A SINE B4 -251 41 1 9 1458 1987 120 15 54 chr13 114553065 114553400 -5730912 + RLTRETN_Mm LTR ERVK 1 322 0 9 1458 594 268 143 50 chr13 114553468 114553747 -5730565 + MER57C2 LTR ERV1 130 434 0 9 1458 23 0 0 0 chr13 114554494 114554517 -5729795 + AT_rich Low_complexity Low_complexity 1 23 0 9 1458 270 56 0 0 chr13 114555979 114556015 -5728297 + (A)n Simple_repeat Simple_repeat 1 36 0 9 1458 1982 91 141 40 chr13 114556195 114556492 -5727820 - ORR1A2 LTR MaLR 0 327 1 9 1459 282 253 53 13 chr13 114557066 114557142 -5727170 + ID4 SINE ID 2 80 -3 9 1459 3048 18 0 0 chr13 114557459 114557796 -5726516 + IAPLTR1a_Mm LTR ERVK 1 337 0 9 1459 426 36 0 0 chr13 114557814 114557869 -5726443 - RLTR10 LTR ERVK -335 55 1 9 1459 953 215 51 10 chr13 114557931 114558128 -5726184 + B3 SINE B2 5 209 -7 1 1459 1784 144 150 3 chr13 114558661 114558994 -5725318 + ORR1B1 LTR MaLR 5 386 -8 1 1459 1198 68 0 0 chr13 114559051 114559199 -5725113 + B1_Mus1 SINE Alu 1 148 0 1 1459 1228 54 0 0 chr13 114559444 114559592 -5724720 + B1_Mus1 SINE Alu 1 148 0 1 1459 366 200 222 0 chr13 114559779 114559869 -5724443 + PB1D10 SINE Alu 1 110 -7 1 1459 250 339 87 66 chr13 114559889 114560072 -5724240 + L2a LINE L2 2922 3108 -318 1 1459 238 324 89 57 chr13 114560929 114561086 -5723226 + ORSL DNA Tip100 104 265 -10 1 1459 204 231 0 0 chr13 114561462 114561501 -5722811 + A-rich Low_complexity Low_complexity 5 43 0 1 1459 500 190 39 20 chr13 114562245 114562347 -5721965 + PB1D9 SINE Alu 17 120 0 1 1459 955 259 114 22 chr13 114563284 114563638 -5720674 - L1M4 LINE L1 -1002 5144 4753 1 1459 422 303 66 73 chr13 114563638 114563926 -5720386 + B4A SINE B4 1 286 -6 1 1459 955 250 113 23 chr13 114563926 114563951 -5720361 - L1M4 LINE L1 -1394 4752 4730 1 1459 1006 155 193 0 chr13 114563960 114564141 -5720171 + B3 SINE B2 1 216 0 1 1459 834 138 6 12 chr13 114564177 114564339 -5719973 + GA-rich Low_complexity Low_complexity 2 162 0 1 1459 1725 151 62 70 chr13 114565112 114565482 -5718830 + ORR1B2 LTR MaLR 1 367 0 1 1459 1260 231 138 14 chr13 114565978 114566333 -5717979 - MTD LTR MaLR -3 416 18 1 1459 535 182 113 53 chr13 114566723 114566856 -5717456 + RSINE1 SINE B4 5 145 -20 1 1459 375 121 0 0 chr13 114566883 114566941 -5717371 + (CA)n Simple_repeat Simple_repeat 2 59 0 1 1459 1124 306 94 58 chr13 114566979 114567562 -5716750 + ERVL-E-int LTR ERVL 3760 4363 -1304 1 1459 1126 307 90 14 chr13 114567698 114568200 -5716112 + ERVL-E-int LTR ERVL 4393 4932 -735 1 1459 712 289 149 48 chr13 114568304 114568727 -5715585 + MLT1C LTR MaLR 1 465 -2 1 1459 301 104 0 59 chr13 114568966 114569017 -5715295 + HAL1-3A_ME LINE L1 1965 2012 -846 1 1459 411 202 0 0 chr13 114569024 114569113 -5715199 + (CA)n Simple_repeat Simple_repeat 2 90 0 1 1459 315 0 0 0 chr13 114569119 114569154 -5715158 + HAL1-3A_ME LINE L1 1977 2011 -847 1 1459 256 340 93 62 chr13 114569671 114569897 -5714415 + MLT2F LTR ERVL 377 609 -54 1 1459 315 301 68 0 chr13 114571455 114571558 -5712754 - PB1D10 SINE Alu -5 112 3 1 1459 2646 40 62 3 chr13 114571888 114572213 -5712099 - ORR1A1 LTR MaLR -2 344 1 1 1459 1382 88 11 5 chr13 114572327 114572511 -5711801 - B2_Mm2 SINE B2 -9 186 2 1 1459 279 264 75 32 chr13 114572527 114572621 -5711691 - MIR SINE MIR -18 244 147 1 1459 272 311 59 102 chr13 114572753 114572871 -5711441 + B4 SINE B4 176 288 -4 1 1459 233 75 0 24 chr13 114574507 114574548 -5709764 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 1 1459 249 33 0 0 chr13 114576509 114576539 -5707773 + (TGGGGG)n Simple_repeat Simple_repeat 2 31 0 1 1459 275 176 191 0 chr13 114577125 114577193 -5707119 - MIR SINE MIR -25 237 157 1 1459 291 292 14 0 chr13 114577206 114577278 -5707034 - MIR SINE MIR -152 110 38 1 1459 754 44 0 0 chr13 114577960 114578051 -5706261 + B1_Mm SINE Alu 57 147 0 1 1459 243 0 0 0 chr13 114578051 114578078 -5706234 + (A)n Simple_repeat Simple_repeat 1 27 0 1 1459 264 250 53 40 chr13 114578945 114579020 -5705292 + RMER15 LTR ERVL 347 422 -153 1 1459 221 349 69 8 chr13 114579093 114579223 -5705089 - B1F1 SINE Alu 0 149 12 1 1459 677 174 128 87 chr13 114579465 114579660 -5704652 - MTD LTR MaLR -20 399 197 1 1459 372 219 42 0 chr13 114579665 114579761 -5704551 - Lx9 LINE L1 -1 7643 7544 1 1459 246 325 8 64 chr13 114579761 114579886 -5704426 + RMER12 LTR ERVK 739 856 -466 1 1459 1158 109 0 0 chr13 114579902 114580151 -5704161 + (TG)n Simple_repeat Simple_repeat 1 249 0 1 1459 1644 37 5 0 chr13 114580180 114580370 -5703942 - B2_Mm1t SINE B2 -1 192 2 1 1459 1117 194 5 5 chr13 114580373 114580570 -5703742 - MTD LTR MaLR -211 208 12 1 1459 614 243 201 37 chr13 114580577 114580850 -5703462 + MLT1D LTR MaLR 7 325 -180 1 1459 987 75 0 0 chr13 114581589 114581722 -5702590 + (TCTA)n Simple_repeat Simple_repeat 2 134 0 1 1459 207 0 0 0 chr13 114582351 114582374 -5701938 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1459 189 0 0 0 chr13 114582560 114582581 -5701731 + (TG)n Simple_repeat Simple_repeat 1 21 0 1 1459 375 23 0 0 chr13 114582730 114582774 -5701538 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1459 356 190 143 48 chr13 114583037 114583142 -5701170 - PB1D9 SINE Alu 0 120 6 1 1459 273 186 127 14 chr13 114583189 114583260 -5701052 - L1M5 LINE L1 -444 5680 5602 1 1459 31 26 0 0 chr13 114583620 114583658 -5700654 + AT_rich Low_complexity Low_complexity 1 38 0 1 1459 1179 48 0 14 chr13 114583658 114583806 -5700506 - B1_Mus1 SINE Alu 0 148 3 1 1459 1183 41 0 64 chr13 114583822 114583979 -5700333 - B1_Mus1 SINE Alu -1 147 1 1 1459 255 61 0 0 chr13 114583982 114584015 -5700297 + (T)n Simple_repeat Simple_repeat 1 33 0 1 1459 253 250 98 0 chr13 114584797 114584889 -5699423 - Tigger15a DNA TcMar -614 101 1 1 1459 1507 195 94 77 chr13 114588000 114588499 -5695813 - MT2B LTR ERVL -3 598 1 1 1459 663 78 0 0 chr13 114588714 114588804 -5695508 + (TTTCC)n Simple_repeat Simple_repeat 5 94 0 1 1459 405 58 0 0 chr13 114588804 114588856 -5695456 + (TCCC)n Simple_repeat Simple_repeat 4 55 0 1 1459 343 293 57 75 chr13 114588885 114588903 -5695409 - B4 SINE B4 -46 246 163 1 1459 766 196 14 0 chr13 114588903 114589046 -5695266 - B1_Mus2 SINE Alu 0 147 3 1 1459 343 293 57 75 chr13 114589046 114589063 -5695249 - B4 SINE B4 -46 162 70 1 1459 1423 71 11 0 chr13 114589084 114589266 -5695046 + B2_Mm1t SINE B2 2 185 -8 1 1459 523 235 70 32 chr13 114589460 114589618 -5694694 - B3 SINE B2 -11 205 42 1 1459 372 118 0 0 chr13 114590023 114590091 -5694221 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 1 1459 1225 41 0 0 chr13 114590092 114590237 -5694075 - B1_Mm SINE Alu 0 147 3 1 1459 357 24 0 0 chr13 114590278 114590320 -5693992 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1459 185 294 10 115 chr13 114590324 114590420 -5693892 - MIRc SINE MIR -169 99 14 1 1459 249 293 84 12 chr13 114591380 114591463 -5692849 + MER45A DNA Tip100 90 178 0 1 1459 294 381 28 43 chr13 114591596 114591807 -5692505 - MIRb SINE MIR -31 237 30 1 1459 180 125 0 0 chr13 114592500 114592532 -5691780 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 1 1459 796 169 0 26 chr13 114597342 114597494 -5686818 + B1_Mur4 SINE Alu 3 150 0 1 1459 1240 263 55 60 chr13 114597572 114597992 -5686320 - MTD LTR MaLR 0 419 2 1 1459 2005 95 21 61 chr13 114598057 114598383 -5685929 + ORR1A3 LTR MaLR 1 313 -13 1 1459 315 256 149 0 chr13 114598441 114598562 -5685750 + MER103 DNA DNA 2 140 -26 1 1459 210 298 119 0 chr13 114598755 114598839 -5685473 - MIRb SINE MIR -8 260 167 1 1459 211 72 23 23 chr13 114598874 114598917 -5685395 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 1 1459 225 292 110 55 chr13 114599747 114599961 -5684351 - L2c LINE L2 -156 3219 3000 1 1459 374 287 172 64 chr13 114600383 114600703 -5683609 - MLT1H1 LTR MaLR -190 405 10 1 1459 1125 244 58 4 chr13 114600906 114601165 -5683147 + B4A SINE B4 2 274 -18 1 1459 426 65 0 0 chr13 114601170 114601232 -5683080 + (CA)n Simple_repeat Simple_repeat 2 63 0 1 1459 201 340 137 17 chr13 114601320 114601447 -5682865 - MIRc SINE MIR -112 156 20 1 1459 251 259 52 0 chr13 114601797 114601855 -5682457 + MIR SINE MIR 111 171 -91 1 1459 211 184 0 0 chr13 114602046 114602084 -5682228 + (TG)n Simple_repeat Simple_repeat 1 38 0 1 1459 442 212 0 103 chr13 114603398 114603524 -5680788 + MT2B LTR ERVL 152 264 -337 1 1459 1156 28 7 0 chr13 114603416 114603558 -5680754 + B1_Mus1 SINE Alu 6 148 0 1 1459 194 62 31 0 chr13 114603608 114603640 -5680672 + (CAAAC)n Simple_repeat Simple_repeat 2 34 0 1 1459 772 238 36 36 chr13 114603859 114604051 -5680261 + B4 SINE B4 15 206 -86 1 1459 306 0 0 0 chr13 114604051 114604085 -5680227 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1459 264 289 105 35 chr13 114604124 114604210 -5680102 + B4 SINE B4 196 287 -5 1 1459 432 0 0 0 chr13 114604243 114604291 -5680021 + (CA)n Simple_repeat Simple_repeat 1 48 0 1 1459 207 246 32 32 chr13 114604756 114604819 -5679493 - MIRm SINE MIR -4 272 210 1 1459 350 314 25 25 chr13 114604910 114605031 -5679281 - MER58B DNA MER1_type -4 337 217 1 1459 240 163 0 0 chr13 114605205 114605248 -5679064 + (TATG)n Simple_repeat Simple_repeat 1 43 0 1 1459 255 257 108 0 chr13 114605719 114605793 -5678519 + ID4_ SINE ID 1 82 -1 1 1459 393 75 0 0 chr13 114606360 114606413 -5677899 + (CAGGG)n Simple_repeat Simple_repeat 2 54 0 1 1459 873 179 81 43 chr13 114606623 114606880 -5677432 + RMER17C LTR ERVK 46 410 0 1 1459 189 0 0 0 chr13 114608043 114608064 -5676248 + (CAAAC)n Simple_repeat Simple_repeat 3 23 0 1 1459 1761 234 66 19 chr13 114608464 114608583 -5675729 - Lx9 LINE L1 -15 7629 7498 1 1459 303 28 0 0 chr13 114608583 114608619 -5675693 + (CCA)n Simple_repeat Simple_repeat 3 38 0 1 1459 1761 234 66 19 chr13 114608619 114609031 -5675281 - Lx9 LINE L1 -147 7497 7074 1 1459 351 179 0 0 chr13 114609031 114609098 -5675214 + (TA)n Simple_repeat Simple_repeat 1 67 0 1 1459 2181 269 64 31 chr13 114609100 114609818 -5674494 - Lx9 LINE L1 -561 7083 6342 1 1459 681 274 131 33 chr13 114609972 114610217 -5674095 + B4A SINE B4 6 274 -18 1 1459 2555 158 69 16 chr13 114611391 114611881 -5672431 - RLTR11A2 LTR ERVK 0 527 12 1 1459 732 277 86 62 chr13 114613676 114614015 -5670297 - ORR1E LTR MaLR -9 350 4 1 1459 251 28 28 0 chr13 114614059 114614095 -5670217 + (ATGTG)n Simple_repeat Simple_repeat 5 41 0 1 1459 246 202 94 12 chr13 114614276 114614361 -5669951 - MLT1J LTR MaLR -332 180 89 2 1459 553 284 92 32 chr13 114615447 114615665 -5668647 + B4A SINE B4 1 231 -61 2 1459 683 217 111 48 chr13 114615660 114615671 -5668641 + B3 SINE B2 6 15 -201 2 1459 192 77 0 0 chr13 114615671 114615697 -5668615 + (AGATG)n Simple_repeat Simple_repeat 1 26 0 2 1459 683 217 111 48 chr13 114615697 114615874 -5668438 + B3 SINE B2 16 206 -10 2 1459 263 185 19 0 chr13 114615945 114615999 -5668313 + B4A SINE B4 216 270 -22 2 1459 1382 86 0 21 chr13 114616400 114616591 -5667721 - B2_Mm2 SINE B2 -7 188 2 2 1459 1596 216 37 0 chr13 114617013 114617364 -5666948 - ORR1D1 LTR MaLR -5 369 6 2 1459 346 286 113 59 chr13 114617508 114617712 -5666600 + MER20 DNA MER1_type 1 215 -4 2 1459 22 0 0 0 chr13 114617961 114617983 -5666329 + AT_rich Low_complexity Low_complexity 1 22 0 2 1459 3205 48 13 5 chr13 114618324 114618721 -5665591 + MTB LTR MaLR 1 400 0 2 1459 350 324 119 9 chr13 114619413 114619522 -5664790 - LTR16B1 LTR ERVL -358 122 2 2 1459 949 296 70 65 chr13 114619548 114620021 -5664291 + MER44B DNA MER2_type 65 539 -11 2 1459 526 324 43 40 chr13 114620212 114620511 -5663801 + MLT1A LTR MaLR 21 320 -54 2 1459 401 355 6 12 chr13 114622307 114622333 -5661979 - MLT1D LTR MaLR -68 437 413 2 1459 536 15 29 0 chr13 114622333 114622401 -5661911 + (GGGAGA)n Simple_repeat Simple_repeat 5 74 0 2 1459 401 350 79 9 chr13 114622401 114622691 -5661621 - MLT1D LTR MaLR -93 412 101 2 1459 1563 219 46 35 chr13 114622728 114623122 -5661190 - MTD LTR MaLR -16 403 6 2 1459 317 214 23 35 chr13 114623569 114623656 -5660656 - ORR1E LTR MaLR -253 106 21 2 1459 192 186 0 0 chr13 114623681 114623740 -5660572 + (TCTG)n Simple_repeat Simple_repeat 4 62 0 2 1459 1120 113 115 8 chr13 114624231 114624450 -5659862 - MTB_Mm LTR MaLR -30 377 157 2 1459 1072 173 35 31 chr13 114625877 114626104 -5658208 - MTD LTR MaLR -122 297 70 2 1459 2701 151 8 28 chr13 114626109 114626578 -5657734 - RMER1B Other Other -11 1055 596 2 1459 329 197 113 0 chr13 114626579 114626650 -5657662 - MTD LTR MaLR -340 79 1 2 1459 221 281 0 0 chr13 114626799 114626856 -5657456 + MIRm SINE MIR 219 275 -1 2 1459 181 0 0 65 chr13 114627346 114627377 -5656935 + (TTA)n Simple_repeat Simple_repeat 3 31 0 2 1459 357 185 74 0 chr13 114627553 114627634 -5656678 + MT2A LTR ERVL 2 88 -445 2 1459 874 183 0 0 chr13 114627648 114627790 -5656522 - B1_Mur3 SINE Alu -7 142 1 2 1459 300 27 0 0 chr13 114627794 114627831 -5656481 + (TTTTTG)n Simple_repeat Simple_repeat 3 39 0 2 1459 671 249 280 36 chr13 114627864 114628140 -5656172 + MT2A LTR ERVL 85 451 -82 2 1459 324 0 0 0 chr13 114628140 114628176 -5656136 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1459 671 249 280 36 chr13 114628176 114628228 -5656084 + MT2A LTR ERVL 452 493 -40 2 1459 448 167 21 0 chr13 114628238 114628334 -5655978 + (TA)n Simple_repeat Simple_repeat 2 99 0 2 1459 419 279 14 28 chr13 114628912 114629056 -5655256 + B1F SINE Alu 2 143 -6 2 1459 1770 182 67 21 chr13 114629108 114629495 -5654817 - MTD LTR MaLR -14 405 1 2 1459 826 250 157 21 chr13 114629910 114630196 -5654116 + Lx8 LINE L1 7047 7371 -102 2 1459 252 86 0 0 chr13 114631158 114631193 -5653119 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1459 207 195 0 24 chr13 114631353 114631395 -5652917 + CT-rich Low_complexity Low_complexity 1 41 0 2 1459 259 269 90 0 chr13 114631396 114631474 -5652838 - PB1D10 SINE Alu -29 88 4 2 1459 268 256 12 0 chr13 114632118 114632200 -5652112 + (TA)n Simple_repeat Simple_repeat 2 84 0 2 1459 262 115 39 0 chr13 114633072 114633124 -5651188 + (TCTG)n Simple_repeat Simple_repeat 3 56 0 2 1459 471 200 0 110 chr13 114633129 114633247 -5651065 - PB1D9 SINE Alu -15 105 1 2 1459 816 238 11 0 chr13 114633448 114633637 -5650675 - B3 SINE B2 -24 192 2 2 1459 635 205 99 0 chr13 114634484 114634635 -5649677 - B3 SINE B2 -3 213 48 2 1459 384 303 115 0 chr13 114635997 114636205 -5648107 + MER21B LTR ERV1 302 533 -330 2 1459 35 63 0 0 chr13 114637418 114637481 -5646831 + AT_rich Low_complexity Low_complexity 1 63 0 2 1459 811 160 27 20 chr13 114637669 114637816 -5646496 - B1_Mur2 SINE Alu 0 149 2 2 1459 204 233 0 0 chr13 114640168 114640211 -5644101 + MER5B DNA MER1_type 126 168 -10 2 1459 212 167 0 0 chr13 114640355 114640391 -5643921 + (TG)n Simple_repeat Simple_repeat 2 37 0 2 1459 523 299 12 19 chr13 114641299 114641459 -5642853 - RSINE1 SINE B4 -1 164 6 2 1459 254 209 59 34 chr13 114642847 114642942 -5641370 - PB1D10 SINE Alu -22 98 1 2 1459 431 244 65 0 chr13 114643034 114643157 -5641155 + ID_B1 SINE B4 84 214 -10 2 1459 381 43 0 0 chr13 114643157 114643204 -5641108 + (CTAA)n Simple_repeat Simple_repeat 3 49 0 2 1459 215 31 31 0 chr13 114643226 114643258 -5641054 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2 1459 23 0 0 0 chr13 114643258 114643281 -5641031 + AT_rich Low_complexity Low_complexity 1 23 0 2 1459 1245 41 0 0 chr13 114643281 114643428 -5640884 - B1_Mm SINE Alu 0 147 1 2 1459 3334 36 21 0 chr13 114647697 114648085 -5636227 - MTA_Mm LTR MaLR 0 396 1 2 1459 217 267 88 11 chr13 114648105 114648196 -5636116 - PB1D7 SINE Alu -5 115 18 2 1459 411 296 9 0 chr13 114648546 114648654 -5635658 + RSINE1 SINE B4 9 117 -48 2 1459 1193 62 0 11 chr13 114648669 114648850 -5635462 + (TG)n Simple_repeat Simple_repeat 2 180 0 2 1459 218 160 20 0 chr13 114649931 114649981 -5634331 + (TTA)n Simple_repeat Simple_repeat 1 51 0 2 1459 1071 77 0 0 chr13 114651792 114651947 -5632365 + (TG)n Simple_repeat Simple_repeat 1 155 0 2 1459 248 395 30 40 chr13 114653133 114653331 -5630981 + MTD LTR MaLR 7 202 -217 2 1459 484 293 90 21 chr13 114653345 114653579 -5630733 + MTD LTR MaLR 156 405 -14 2 1459 426 317 98 13 chr13 114654018 114654242 -5630070 - MLT1J LTR MaLR -145 367 125 2 1459 775 209 34 38 chr13 114655183 114655392 -5628920 + B3 SINE B2 3 210 -6 2 1459 27 49 0 0 chr13 114656656 114656697 -5627615 + AT_rich Low_complexity Low_complexity 1 41 0 2 1459 944 208 219 150 chr13 114657258 114657347 -5626965 + MT2A LTR ERVL 8 75 -458 2 1459 666 126 242 8 chr13 114657347 114657467 -5626845 - B1_Mus1 SINE Alu 0 148 1 2 1459 944 208 219 150 chr13 114657467 114657812 -5626500 + MT2A LTR ERVL 76 462 -71 2 1459 261 98 0 0 chr13 114657812 114657853 -5626459 + (TG)n Simple_repeat Simple_repeat 2 42 0 2 1459 944 208 219 150 chr13 114657853 114657909 -5626403 + MT2A LTR ERVL 463 533 0 2 1459 293 0 27 0 chr13 114658670 114658707 -5625605 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 1459 445 252 0 18 chr13 114658707 114658820 -5625492 - PB1D9 SINE Alu -9 111 1 2 1459 1186 62 0 0 chr13 114659137 114659283 -5625029 - B1_Mus2 SINE Alu 0 147 2 2 1459 360 0 0 0 chr13 114660476 114660516 -5623796 + (TAA)n Simple_repeat Simple_repeat 1 40 0 2 1459 554 87 0 12 chr13 114662827 114662909 -5621403 - B2_Mm2 SINE B2 -112 83 3 2 1459 466 315 41 0 chr13 114662913 114663059 -5621253 - Lx8 LINE L1 -559 6914 6763 2 1459 1518 241 156 29 chr13 114663074 114663561 -5620751 + Lx8 LINE L1 6149 6697 -776 2 1459 396 0 0 0 chr13 114664645 114664689 -5619623 + (TC)n Simple_repeat Simple_repeat 1 44 0 2 1459 492 18 0 0 chr13 114664692 114664749 -5619563 + (TG)n Simple_repeat Simple_repeat 1 57 0 2 1459 228 35 0 0 chr13 114665359 114665388 -5618924 + (GA)n Simple_repeat Simple_repeat 2 30 0 2 1459 182 118 0 29 chr13 114666266 114666301 -5618011 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 2 1459 30 0 0 0 chr13 114666386 114666416 -5617896 + AT_rich Low_complexity Low_complexity 1 30 0 2 1459 743 59 10 0 chr13 114666974 114667075 -5617237 + (TTTC)n Simple_repeat Simple_repeat 2 103 0 2 1459 342 0 0 0 chr13 114668431 114668469 -5615843 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1459 231 36 0 0 chr13 114669243 114669271 -5615041 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 2 1459 23 0 0 0 chr13 114670599 114670622 -5613690 + AT_rich Low_complexity Low_complexity 1 23 0 2 1459 305 281 10 10 chr13 114672730 114672834 -5611478 - MIR3 SINE MIR -8 200 97 2 1459 441 0 0 0 chr13 114673221 114673270 -5611042 + (TG)n Simple_repeat Simple_repeat 1 49 0 2 1459 271 273 0 15 chr13 114673676 114673775 -5610537 + (TG)n Simple_repeat Simple_repeat 1 97 0 2 1459 341 273 73 0 chr13 114674033 114674143 -5610169 + RSINE1 SINE B4 10 127 -38 2 1459 672 45 0 0 chr13 114674171 114674259 -5610053 + (CA)n Simple_repeat Simple_repeat 2 89 0 2 1459 211 176 0 0 chr13 114674430 114674464 -5609848 + C-rich Low_complexity Low_complexity 5 38 0 2 1459 1604 42 5 0 chr13 114675437 114675628 -5608684 - B2_Mm1a SINE B2 -1 192 1 2 1459 651 26 0 0 chr13 114676419 114676496 -5607816 + (TCC)n Simple_repeat Simple_repeat 1 77 0 2 1459 388 242 147 49 chr13 114677178 114677382 -5606930 - HAL1 LINE L1 -825 1682 1459 2 1459 330 87 0 0 chr13 114677795 114677841 -5606471 + (TCTG)n Simple_repeat Simple_repeat 1 46 0 2 1459 565 274 6 13 chr13 114677844 114678003 -5606309 - B3 SINE B2 -51 165 8 2 1459 22 0 0 0 chr13 114678885 114678907 -5605405 + AT_rich Low_complexity Low_complexity 1 22 0 2 1459 1083 126 178 0 chr13 114681375 114681566 -5602746 - URR1A DNA MER1_type 0 226 2 2 1459 1125 175 57 0 chr13 114682490 114682701 -5601611 - URR1B DNA MER1_type -2 223 1 2 1459 369 0 0 0 chr13 114683894 114683935 -5600377 + (GA)n Simple_repeat Simple_repeat 1 41 0 2 1459 681 139 35 0 chr13 114683951 114684124 -5600188 + GA-rich Low_complexity Low_complexity 2 180 0 2 1459 692 246 0 0 chr13 114684455 114684593 -5599719 + B1_Mur1 SINE Alu 3 140 -9 2 1459 294 95 0 0 chr13 114684593 114684635 -5599677 + (TTAA)n Simple_repeat Simple_repeat 1 42 0 2 1459 306 288 103 38 chr13 114684757 114684941 -5599371 - MLT1D LTR MaLR -6 499 304 2 1459 624 200 40 0 chr13 114684959 114685109 -5599203 + URR1A DNA MER1_type 59 214 -12 2 1459 212 154 0 0 chr13 114685572 114685611 -5598701 + C-rich Low_complexity Low_complexity 1 39 0 2 1459 440 310 192 20 chr13 114685703 114686057 -5598255 - MER31A LTR ERV1 -2 483 69 3 1459 21 36 0 0 chr13 114687636 114687664 -5596648 + AT_rich Low_complexity Low_complexity 1 28 0 3 1459 297 0 0 0 chr13 114687724 114687757 -5596555 + (CAAA)n Simple_repeat Simple_repeat 3 35 0 3 1460 874 336 48 14 chr13 114688188 114688628 -5595684 + MER44B DNA MER2_type 92 546 -4 3 1460 411 21 0 0 chr13 114689968 114690016 -5594296 + (CA)n Simple_repeat Simple_repeat 1 48 0 3 1460 24 0 0 0 chr13 114690078 114690102 -5594210 + AT_rich Low_complexity Low_complexity 1 24 0 3 1460 226 295 116 0 chr13 114690275 114690370 -5593942 - ID_B1 SINE B4 -23 201 96 3 1460 189 94 0 0 chr13 114690751 114690783 -5593529 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 1460 405 102 0 0 chr13 114691147 114691206 -5593106 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 3 1460 423 257 9 37 chr13 114692160 114692269 -5592043 - ID_B1 SINE B4 -4 220 115 3 1460 295 392 0 16 chr13 114692642 114692764 -5591548 + RSINE1 SINE B4 3 122 -43 3 1460 510 96 0 0 chr13 114692764 114692837 -5591475 + (TCTA)n Simple_repeat Simple_repeat 1 73 0 3 1460 207 0 0 0 chr13 114692864 114692887 -5591425 + (CA)n Simple_repeat Simple_repeat 2 24 0 3 1460 180 111 0 0 chr13 114692889 114692916 -5591396 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 3 1460 381 281 61 23 chr13 114693402 114693533 -5590779 - LTR48 LTR ERV1 -648 139 4 3 1460 920 264 63 45 chr13 114693579 114693937 -5590375 - L2 LINE L2 -529 2890 2532 3 1460 273 57 0 0 chr13 114693937 114693972 -5590340 + (CTAA)n Simple_repeat Simple_repeat 3 37 0 3 1460 920 264 63 45 chr13 114693972 114694010 -5590302 - L2 LINE L2 -888 2531 2488 3 1460 487 313 117 59 chr13 114694032 114694697 -5589615 - L1MB3 LINE L1 0 6183 5480 3 1460 505 95 0 0 chr13 114694766 114694840 -5589472 + L1Md_F2 LINE L1 6487 6560 -22 3 1460 309 339 0 24 chr13 114695013 114695137 -5589175 + B4A SINE B4 172 292 0 3 1460 250 279 23 0 chr13 114695186 114695272 -5589040 - L1MB3 LINE L1 -847 5293 5206 3 1460 234 276 204 7 chr13 114695287 114695429 -5588883 - MTEa LTR MaLR 0 379 210 3 1460 988 271 195 78 chr13 114695559 114695729 -5588583 - L1MB3 LINE L1 -1038 5102 4945 3 1460 198 0 0 0 chr13 114695729 114695751 -5588561 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 3 1460 988 271 195 78 chr13 114695751 114696342 -5587970 - L1MB3 LINE L1 -1196 4944 4247 3 1460 900 70 145 15 chr13 114696342 114696473 -5587839 - B1_Mus1 SINE Alu 0 148 1 3 1460 988 272 191 78 chr13 114696473 114697469 -5586843 - L1MB3 LINE L1 -1894 4252 3161 3 1460 273 315 248 0 chr13 114699059 114699208 -5585104 - LTR33 LTR ERVL -296 219 34 3 1460 306 50 0 0 chr13 114699898 114699938 -5584374 + (TG)n Simple_repeat Simple_repeat 2 41 0 3 1460 467 279 100 0 chr13 114699938 114700078 -5584234 - B3 SINE B2 -30 186 33 3 1460 450 193 11 33 chr13 114700086 114700177 -5584135 - PB1D9 SINE Alu -29 91 3 3 1460 271 261 0 55 chr13 114700115 114700188 -5584124 - B4 SINE B4 -143 149 81 3 1460 1100 163 113 5 chr13 114700512 114700716 -5583596 - URR1A DNA MER1_type 0 226 1 3 1460 28 0 0 0 chr13 114702763 114702791 -5581521 + AT_rich Low_complexity Low_complexity 1 28 0 3 1460 271 202 12 12 chr13 114705601 114705686 -5578626 + (TA)n Simple_repeat Simple_repeat 2 86 0 3 1460 22 70 0 0 chr13 114706693 114706736 -5577576 + AT_rich Low_complexity Low_complexity 1 43 0 3 1460 477 90 0 0 chr13 114707407 114707474 -5576838 + (CA)n Simple_repeat Simple_repeat 2 68 0 3 1460 198 0 0 0 chr13 114708866 114708888 -5575424 + (TA)n Simple_repeat Simple_repeat 2 23 0 3 1460 240 184 0 0 chr13 114709304 114709353 -5574959 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3 1460 444 246 82 34 chr13 114709353 114709500 -5574812 - RSINE1 SINE B4 -11 154 1 3 1460 959 165 129 0 chr13 114710876 114711070 -5573242 + URR1A DNA MER1_type 1 219 -7 3 1460 869 278 86 40 chr13 114711788 114712193 -5572119 - L1MC4 LINE L1 -144 7898 7475 3 1460 34 24 0 0 chr13 114713075 114713116 -5571196 + AT_rich Low_complexity Low_complexity 1 41 0 3 1460 324 218 128 0 chr13 114713148 114713226 -5571086 - B3 SINE B2 -81 135 48 3 1460 297 109 0 0 chr13 114713880 114713926 -5570386 + (TGG)n Simple_repeat Simple_repeat 1 46 0 3 1460 1118 67 120 12 chr13 114715716 114715883 -5568429 - B2_Mm2 SINE B2 -8 187 3 3 1460 228 67 0 0 chr13 114716016 114716046 -5568266 + (TTG)n Simple_repeat Simple_repeat 1 30 0 3 1460 295 278 42 25 chr13 114716205 114716323 -5567989 - L2a LINE L2 -1 3425 3306 3 1460 241 204 0 0 chr13 114716657 114716706 -5567606 - ID_B1 SINE B4 -92 132 84 3 1460 356 347 129 9 chr13 114716715 114717049 -5567263 + L1MD LINE L1 2344 2717 -3429 3 1460 369 0 0 0 chr13 114717222 114717263 -5567049 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 1460 643 194 178 10 chr13 114717575 114717765 -5566547 + B3 SINE B2 7 205 -11 3 1460 1229 14 21 0 chr13 114717767 114717911 -5566401 + B1_Mm SINE Alu 1 147 0 3 1460 277 290 105 36 chr13 114717952 114718199 -5566113 + L1M5 LINE L1 3025 3288 -2858 3 1460 27 49 0 0 chr13 114718970 114719011 -5565301 + AT_rich Low_complexity Low_complexity 1 41 0 3 1460 22 0 0 0 chr13 114719044 114719066 -5565246 + AT_rich Low_complexity Low_complexity 1 22 0 3 1460 378 0 0 0 chr13 114721254 114721296 -5563016 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 3 1460 235 342 27 0 chr13 114721327 114721400 -5562912 - MIRb SINE MIR -167 101 27 3 1460 894 124 25 0 chr13 114721670 114721831 -5562481 + (TTCTC)n Simple_repeat Simple_repeat 4 168 0 3 1460 435 106 0 0 chr13 114721843 114721909 -5562403 + (TTCC)n Simple_repeat Simple_repeat 3 68 0 3 1460 984 141 0 0 chr13 114722662 114722825 -5561487 + (TC)n Simple_repeat Simple_repeat 1 163 0 3 1460 663 125 0 0 chr13 114723381 114723485 -5560827 + (GGGAGA)n Simple_repeat Simple_repeat 5 108 0 3 1460 333 0 0 0 chr13 114727417 114727454 -5556858 + (TATATG)n Simple_repeat Simple_repeat 1 37 0 3 1460 378 263 0 0 chr13 114730923 114731094 -5553218 + (TATATG)n Simple_repeat Simple_repeat 3 173 0 3 1460 23 54 0 0 chr13 114733961 114733998 -5550314 + AT_rich Low_complexity Low_complexity 1 37 0 3 1460 270 0 0 0 chr13 114734924 114734954 -5549358 + (A)n Simple_repeat Simple_repeat 1 30 0 3 1460 1270 66 12 0 chr13 114735240 114735407 -5548905 + B2_Mm2 SINE B2 4 172 -23 3 1460 367 321 118 15 chr13 114735534 114735787 -5548525 + L1ME1 LINE L1 5662 5932 -1853 3 1460 279 226 87 19 chr13 114735927 114736031 -5548281 + L1MA10 LINE L1 6180 6290 -44 3 1460 851 190 15 0 chr13 114737100 114737237 -5547075 - B1_Mur2 SINE Alu -10 139 1 3 1460 628 193 44 0 chr13 114739330 114739444 -5544868 + B1_Mur1 SINE Alu 3 121 -28 3 1460 1303 241 167 8 chr13 114741359 114741719 -5542593 + MTD LTR MaLR 1 417 -2 3 1460 249 33 0 0 chr13 114742061 114742091 -5542221 + (CAAA)n Simple_repeat Simple_repeat 1 30 0 3 1460 448 301 82 24 chr13 114742510 114742623 -5541689 - L3 LINE CR1 -697 3792 3671 3 1460 315 0 0 0 chr13 114742623 114742658 -5541654 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 3 1460 448 301 82 24 chr13 114742658 114742752 -5541560 - L3 LINE CR1 -819 3670 3573 3 1460 272 356 48 30 chr13 114742744 114742909 -5541403 - L2b LINE L2 -1 3374 3207 3 1460 186 355 100 46 chr13 114743263 114743393 -5540919 - L3 LINE CR1 -1404 3085 2949 3 1460 579 96 0 0 chr13 114746194 114746277 -5538035 + (TCTA)n Simple_repeat Simple_repeat 1 83 0 3 1460 331 179 15 15 chr13 114746291 114746359 -5537953 + ORR1A1 LTR MaLR 279 346 0 3 1460 276 263 65 10 chr13 114746377 114746490 -5537822 + Lx5 LINE L1 5657 5808 -360 3 1460 522 0 0 0 chr13 114747433 114747491 -5536821 + (TC)n Simple_repeat Simple_repeat 2 59 0 3 1460 183 297 65 21 chr13 114748184 114748277 -5536035 - L2a LINE L2 0 3426 3330 3 1460 198 0 0 0 chr13 114749087 114749109 -5535203 + (T)n Simple_repeat Simple_repeat 1 22 0 3 1460 183 404 18 30 chr13 114749109 114749275 -5535037 - MIR SINE MIR -74 188 25 3 1460 212 0 36 0 chr13 114749727 114749755 -5534557 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3 1460 1887 298 142 33 chr13 114751881 114753132 -5531180 - Charlie1a DNA MER1_type -20 1435 48 3 1460 783 219 0 40 chr13 114754193 114754345 -5529967 - B1_Mur3 SINE Alu -3 146 1 3 1460 847 231 80 5 chr13 114754764 114754964 -5529348 + B3 SINE B2 1 215 -1 3 1460 348 283 111 16 chr13 114755015 114755205 -5529107 + MER63C DNA AcHobo 651 858 -72 3 1460 909 311 71 62 chr13 114755329 114755778 -5528534 + LTR16A1 LTR ERVL 1 453 -3 3 1460 225 339 0 0 chr13 114756117 114756176 -5528136 + L2b LINE L2 3306 3364 -11 3 1460 461 330 0 0 chr13 114756372 114756478 -5527834 - MER63A DNA AcHobo -94 116 11 3 1460 351 0 0 0 chr13 114756669 114756708 -5527604 + (CA)n Simple_repeat Simple_repeat 1 39 0 3 1460 536 255 117 52 chr13 114756992 114757282 -5527030 - MLT1A LTR MaLR -3 371 63 3 1460 290 246 16 16 chr13 114759077 114759097 -5525215 + ORR1B1-int LTR MaLR 627 646 -863 3 1460 974 141 0 0 chr13 114759097 114759239 -5525073 + B1_Mus1 SINE Alu 1 142 -6 3 1460 240 261 86 7 chr13 114759685 114759801 -5524511 - B3A SINE B2 -27 171 1 3 1460 324 0 0 0 chr13 114764966 114765002 -5519310 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 3 1460 243 103 0 0 chr13 114765146 114765185 -5519127 + (TTA)n Simple_repeat Simple_repeat 1 39 0 3 1460 198 167 0 0 chr13 114765362 114765398 -5518914 + A-rich Low_complexity Low_complexity 1 36 0 3 1460 29 0 0 0 chr13 114765566 114765595 -5518717 + AT_rich Low_complexity Low_complexity 1 29 0 3 1460 21 0 0 0 chr13 114767491 114767512 -5516800 + AT_rich Low_complexity Low_complexity 1 21 0 3 1460 480 18 0 0 chr13 114767615 114767672 -5516640 + (TGGGGG)n Simple_repeat Simple_repeat 3 59 0 3 1460 665 196 160 52 chr13 114768352 114768546 -5515766 - B3 SINE B2 -1 215 1 3 1460 669 219 8 8 chr13 114768967 114769096 -5515216 + B1_Mur2 SINE Alu 21 149 0 3 1460 327 49 0 0 chr13 114771489 114771530 -5512782 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1460 306 106 0 0 chr13 114771659 114771706 -5512606 + (T)n Simple_repeat Simple_repeat 1 47 0 4 1460 440 35 17 0 chr13 114772765 114772823 -5511489 + (TA)n Simple_repeat Simple_repeat 1 59 0 4 1460 22 35 0 0 chr13 114773221 114773250 -5511062 + AT_rich Low_complexity Low_complexity 1 29 0 4 1460 201 94 0 0 chr13 114775047 114775079 -5509233 + (TG)n Simple_repeat Simple_repeat 1 32 0 4 1460 774 211 106 66 chr13 114775275 114775473 -5508839 + B3 SINE B2 2 207 -9 4 1460 511 194 143 79 chr13 114775961 114776101 -5508211 + B1_Mur4 SINE Alu 1 149 -1 4 1460 1405 106 16 0 chr13 114776251 114776439 -5507873 + B2_Mm2 SINE B2 2 192 -3 4 1460 243 227 27 120 chr13 114776657 114776732 -5507580 - ID4 SINE ID -11 72 5 4 1460 189 0 0 0 chr13 114777408 114777429 -5506883 + (A)n Simple_repeat Simple_repeat 1 21 0 4 1460 181 119 23 23 chr13 114778406 114778449 -5505863 + CT-rich Low_complexity Low_complexity 1 43 0 4 1460 415 274 21 0 chr13 114778565 114778660 -5505652 + RSINE1 SINE B4 4 100 -65 4 1460 222 150 0 0 chr13 114778669 114778709 -5505603 + (ATGGTG)n Simple_repeat Simple_repeat 5 44 0 4 1460 342 299 129 21 chr13 114778903 114779235 -5505077 - L1ME3B LINE L1 -181 6059 5692 4 1460 2026 120 0 114 chr13 114779336 114779704 -5504608 - ORR1A4 LTR MaLR -3 326 1 4 1460 1016 97 0 0 chr13 114779737 114779871 -5504441 + B1_Mus2 SINE Alu 2 135 -12 4 1460 189 0 0 0 chr13 114779871 114779892 -5504420 + (TAAA)n Simple_repeat Simple_repeat 1 21 0 4 1460 225 0 0 0 chr13 114779934 114779959 -5504353 + (T)n Simple_repeat Simple_repeat 1 25 0 4 1460 201 39 0 0 chr13 114780284 114780310 -5504002 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4 1460 45 34 0 0 chr13 114780338 114780397 -5503915 + AT_rich Low_complexity Low_complexity 1 59 0 4 1460 257 301 97 0 chr13 114782139 114782242 -5502070 + PB1D10 SINE Alu 5 117 0 4 1460 319 279 116 14 chr13 114782370 114782508 -5501804 - B3 SINE B2 -6 210 59 4 1460 401 309 7 62 chr13 114782884 114783029 -5501283 + B4A SINE B4 3 139 -153 4 1460 459 160 0 0 chr13 114783072 114783166 -5501146 + GA-rich Low_complexity Low_complexity 2 95 0 4 1460 33 0 0 0 chr13 114787738 114787771 -5496541 + AT_rich Low_complexity Low_complexity 1 33 0 4 1460 248 0 0 30 chr13 114787937 114787970 -5496342 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 4 1460 267 325 54 60 chr13 114788088 114788351 -5495961 + B4 SINE B4 6 274 -18 4 1460 201 133 16 48 chr13 114788829 114788892 -5495420 + G-rich Low_complexity Low_complexity 5 65 0 4 1460 21 71 0 0 chr13 114789478 114789520 -5494792 + AT_rich Low_complexity Low_complexity 1 42 0 4 1460 188 122 0 24 chr13 114789523 114789565 -5494747 + (TAAAAA)n Simple_repeat Simple_repeat 4 44 0 4 1460 1702 21 5 0 chr13 114789573 114789765 -5494547 + B2_Mm1t SINE B2 1 193 0 4 1460 21 0 0 0 chr13 114790827 114790848 -5493464 + AT_rich Low_complexity Low_complexity 1 21 0 4 1460 323 239 125 0 chr13 114791697 114791785 -5492527 + PB1 SINE Alu 22 120 -7 4 1460 488 269 68 12 chr13 114791918 114792080 -5492232 + B3A SINE B2 1 171 -27 4 1460 360 0 0 0 chr13 114792084 114792124 -5492188 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1460 255 61 0 0 chr13 114795909 114795942 -5488370 + (GA)n Simple_repeat Simple_repeat 1 33 0 4 1460 580 319 35 49 chr13 114797244 114797528 -5486784 - B4A SINE B4 -11 281 2 4 1460 21 0 0 0 chr13 114798330 114798351 -5485961 + AT_rich Low_complexity Low_complexity 1 21 0 4 1460 483 254 30 53 chr13 114798666 114798799 -5485513 - B3 SINE B2 -86 130 1 4 1460 393 303 52 52 chr13 114799172 114799384 -5484928 - MER20 DNA MER1_type -6 213 2 4 1460 743 221 18 42 chr13 114799627 114799792 -5484520 - RSINE1 SINE B4 -3 162 2 4 1460 29 60 0 0 chr13 114799800 114799850 -5484462 + AT_rich Low_complexity Low_complexity 1 50 0 4 1460 26 0 0 0 chr13 114801732 114801758 -5482554 + AT_rich Low_complexity Low_complexity 1 26 0 4 1460 184 30 29 29 chr13 114802932 114802966 -5481346 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1460 265 321 53 8 chr13 114803381 114803513 -5480799 + L1MA6 LINE L1 6119 6256 -44 4 1460 540 200 7 150 chr13 114803616 114803769 -5480543 - B1F SINE Alu -14 135 5 4 1460 406 296 65 46 chr13 114804204 114804420 -5479892 + L1MB8 LINE L1 5848 6067 -111 4 1460 415 222 36 27 chr13 114804992 114805103 -5479209 - PB1D9 SINE Alu -3 117 6 4 1460 246 209 29 117 chr13 114805024 114805127 -5479185 - MT2B LTR ERVL -361 240 147 4 1460 2180 284 42 57 chr13 114805328 114806024 -5478288 - L1MC3 LINE L1 -765 7020 6348 4 1460 234 0 0 0 chr13 114806024 114806050 -5478262 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1460 2180 284 42 57 chr13 114806050 114806348 -5477964 - L1MC3 LINE L1 -1438 6347 6041 4 1460 1076 84 18 18 chr13 114806353 114806523 -5477789 - B2_Mm2 SINE B2 -25 170 1 4 1460 238 261 116 16 chr13 114806539 114806660 -5477652 - L1MC3 LINE L1 -2329 5713 5581 4 1460 288 242 185 11 chr13 114806674 114806766 -5477546 + B1F SINE Alu 10 117 -32 4 1460 362 269 222 14 chr13 114806804 114807079 -5477233 - L1MC3 LINE L1 -2193 5592 5261 4 1460 259 290 10 61 chr13 114807246 114807345 -5476967 + PB1D10 SINE Alu 23 116 -1 4 1460 351 0 0 0 chr13 114807456 114807495 -5476817 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 4 1460 349 252 0 5 chr13 114808695 114808922 -5475390 + (TA)n Simple_repeat Simple_repeat 1 225 0 4 1460 521 333 92 20 chr13 114809025 114809328 -5474984 - ERVL-B4-int LTR ERVL -3544 2170 1846 4 1460 345 239 98 27 chr13 114810415 114810527 -5473785 + B1F1 SINE Alu 29 148 -1 4 1460 27 0 0 0 chr13 114810655 114810682 -5473630 + AT_rich Low_complexity Low_complexity 1 27 0 4 1460 1264 120 10 0 chr13 114810687 114810879 -5473433 + B2_Mm2 SINE B2 2 195 0 4 1460 25 0 0 0 chr13 114810931 114810956 -5473356 + AT_rich Low_complexity Low_complexity 1 25 0 4 1460 519 60 0 0 chr13 114811028 114811095 -5473217 + (TG)n Simple_repeat Simple_repeat 1 67 0 4 1460 2195 295 79 47 chr13 114811167 114812145 -5472167 - Lx9 LINE L1 -249 7395 6387 4 1460 597 296 27 9 chr13 114812514 114812736 -5471576 - L1MA4 LINE L1 -368 5932 5707 4 1460 245 328 0 0 chr13 114813583 114813647 -5470665 + ID4_ SINE ID 15 78 -5 4 1460 198 0 0 0 chr13 114814225 114814247 -5470065 + (TCC)n Simple_repeat Simple_repeat 2 23 0 4 1460 234 156 0 0 chr13 114814245 114814290 -5470022 + (CAT)n Simple_repeat Simple_repeat 3 47 0 4 1460 323 281 101 0 chr13 114814305 114814394 -5469918 - ID_B1 SINE B4 -9 215 118 4 1460 228 316 16 58 chr13 114814376 114814497 -5469815 - PB1D10 SINE Alu 0 117 2 4 1460 262 227 132 33 chr13 114814631 114814722 -5469590 - MTD LTR MaLR -219 200 101 4 1460 210 118 0 0 chr13 114814750 114814784 -5469528 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1460 510 17 0 0 chr13 114814819 114814878 -5469434 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1460 351 0 0 0 chr13 114814878 114814916 -5469396 + (GA)n Simple_repeat Simple_repeat 2 40 0 4 1460 399 264 28 0 chr13 114815576 114815682 -5468630 + B1_Mur1 SINE Alu 29 137 -12 4 1460 234 151 18 36 chr13 114815815 114815870 -5468442 + MLT1A1 LTR MaLR 351 404 -4 4 1460 225 154 0 0 chr13 114816121 114816160 -5468152 + B1_Mus2 SINE Alu 1 39 -108 4 1460 320 259 16 79 chr13 114816126 114816252 -5468060 + MT2B LTR ERVL 140 257 -344 4 1460 922 95 0 0 chr13 114816160 114816297 -5468015 + B1_Mus2 SINE Alu 11 147 0 4 1460 275 298 32 0 chr13 114816508 114816632 -5467680 - L3 LINE CR1 -541 3948 3821 4 1460 303 281 11 43 chr13 114818149 114818242 -5466070 + Lx9 LINE L1 6380 6469 -1175 4 1460 994 294 39 6 chr13 114818238 114818550 -5465762 + Lx9 LINE L1 6687 7008 -636 4 1460 342 0 0 0 chr13 114818665 114818703 -5465609 + (TG)n Simple_repeat Simple_repeat 1 38 0 4 1460 21 0 0 0 chr13 114818742 114818763 -5465549 + AT_rich Low_complexity Low_complexity 1 21 0 4 1460 887 136 0 7 chr13 114818868 114819009 -5465303 - B1_Mus2 SINE Alu -7 140 1 4 1461 473 259 17 43 chr13 114819105 114819222 -5465090 - RSINE1 SINE B4 -40 125 12 4 1461 488 275 111 5 chr13 114819573 114819781 -5464531 - B4A SINE B4 -62 230 1 4 1461 417 229 64 0 chr13 114821444 114821553 -5462759 + RSINE1 SINE B4 2 117 -48 4 1461 207 0 0 0 chr13 114821575 114821598 -5462714 + (CA)n Simple_repeat Simple_repeat 2 24 0 4 1461 23 33 0 0 chr13 114821798 114821828 -5462484 + AT_rich Low_complexity Low_complexity 1 30 0 4 1461 718 171 61 48 chr13 114821908 114822055 -5462257 - B1_Mur2 SINE Alu 0 149 1 4 1461 234 0 0 0 chr13 114822592 114822618 -5461694 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1461 180 0 0 0 chr13 114822618 114822637 -5461675 + (CG)n Simple_repeat Simple_repeat 1 20 0 4 1461 252 0 0 0 chr13 114822637 114822664 -5461648 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1461 336 191 211 11 chr13 114822675 114822765 -5461547 - B1_Mur2 SINE Alu -40 109 2 4 1461 21 0 0 0 chr13 114823179 114823200 -5461112 + AT_rich Low_complexity Low_complexity 1 21 0 4 1461 210 262 36 48 chr13 114824032 114824116 -5460196 - PB1D10 SINE Alu 0 117 35 4 1461 314 152 10 80 chr13 114824773 114824873 -5459439 + Lx6 LINE L1 7342 7434 -26 4 1461 369 0 0 0 chr13 114824966 114825007 -5459305 + (TG)n Simple_repeat Simple_repeat 2 42 0 4 1461 1344 94 5 30 chr13 114826324 114826522 -5457790 - B2_Mm2 SINE B2 -1 194 2 4 1461 432 278 153 0 chr13 114826638 114826782 -5457530 - B3 SINE B2 -10 206 41 4 1461 369 0 0 0 chr13 114826959 114827000 -5457312 + (GA)n Simple_repeat Simple_repeat 2 42 0 4 1461 582 214 8 15 chr13 114827329 114827462 -5456850 + B1F SINE Alu 17 148 -1 4 1461 900 176 0 0 chr13 114828008 114828178 -5456134 + CT-rich Low_complexity Low_complexity 2 171 0 5 1461 1150 64 0 0 chr13 114828180 114828320 -5455992 - B1_Mus2 SINE Alu -6 141 2 5 1461 24 0 0 0 chr13 114828597 114828621 -5455691 + AT_rich Low_complexity Low_complexity 1 24 0 5 1461 4455 16 4 0 chr13 114830195 114830686 -5453626 + MT2_Mm LTR ERVL 1 493 0 5 1461 36425 14 6 0 chr13 114830686 114836013 -5448299 + MERVL-int LTR ERVL 1 5360 -125 5 1461 331 191 46 35 chr13 114836013 114836100 -5448212 + ORR1A3-int LTR MaLR 553 640 -1323 5 1461 321 0 0 0 chr13 114836100 114836138 -5448174 + MERVL-int LTR ERVL 5448 5485 0 5 1461 4455 16 4 0 chr13 114836138 114836629 -5447683 + MT2_Mm LTR ERVL 1 493 0 5 1461 261 0 0 0 chr13 114836718 114836747 -5447565 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1461 464 266 42 37 chr13 114836926 114837105 -5447207 + B3 SINE B2 1 195 -3 5 1461 1233 66 54 12 chr13 114837125 114837293 -5447019 + B2_Mm2 SINE B2 2 176 -19 5 1461 213 94 0 0 chr13 114837308 114837340 -5446972 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 5 1461 639 208 0 0 chr13 114837959 114838089 -5446223 + B3 SINE B2 1 130 -86 5 1461 180 0 0 0 chr13 114838092 114838112 -5446200 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 5 1461 890 286 63 54 chr13 114838294 114838833 -5445479 - L1MDa LINE L1 -4514 2119 1576 5 1461 478 267 0 25 chr13 114839286 114839405 -5444907 + PB1D10 SINE Alu 2 117 0 5 1461 425 301 68 14 chr13 114839409 114839557 -5444755 - L1MDa LINE L1 -5317 1223 1068 5 1461 1186 169 25 20 chr13 114839583 114839782 -5444530 - B3 SINE B2 -14 202 3 5 1461 240 35 0 0 chr13 114839985 114840014 -5444298 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 5 1461 366 23 0 0 chr13 114842176 114842219 -5442093 + (TA)n Simple_repeat Simple_repeat 1 43 0 5 1461 351 0 0 0 chr13 114842222 114842261 -5442051 + (TG)n Simple_repeat Simple_repeat 1 39 0 5 1461 346 248 0 0 chr13 114843744 114843830 -5440482 + B1_Mur4 SINE Alu 22 107 -13 5 1461 486 0 0 0 chr13 114843831 114843885 -5440427 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 5 1461 300 253 65 21 chr13 114844331 114844424 -5439888 + B3 SINE B2 120 216 0 5 1461 207 0 0 0 chr13 114844719 114844742 -5439570 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5 1461 371 108 18 0 chr13 114844756 114844825 -5439487 - B2_Mm2 SINE B2 -100 116 47 5 1461 1360 69 23 0 chr13 114844854 114845029 -5439283 - B2_Mm2 SINE B2 -15 180 2 5 1461 277 202 339 52 chr13 114845396 114845412 -5438900 + ID_B1 SINE B4 77 224 0 5 1461 383 194 131 10 chr13 114845412 114845511 -5438801 + PB1D10 SINE Alu 6 116 -1 5 1461 639 310 111 34 chr13 114845619 114845943 -5438369 + L1M3e LINE L1 43 391 -6639 5 1461 381 233 217 24 chr13 114846137 114846344 -5437968 + L1M3e LINE L1 1803 2049 -4981 5 1461 244 0 56 0 chr13 114846713 114846749 -5437563 + (CAAAAA)n Simple_repeat Simple_repeat 4 41 0 5 1461 432 0 0 0 chr13 114846856 114846904 -5437408 + (CA)n Simple_repeat Simple_repeat 2 49 0 5 1461 384 282 154 0 chr13 114846909 114847058 -5437254 - Lx9 LINE L1 -171 7473 7302 5 1461 21 0 0 0 chr13 114847207 114847228 -5437084 + AT_rich Low_complexity Low_complexity 1 21 0 5 1461 684 244 106 30 chr13 114847285 114847484 -5436828 + B3 SINE B2 3 216 0 5 1461 762 63 9 0 chr13 114847868 114847979 -5436333 + B2_Mm2 SINE B2 42 153 -42 5 1461 464 164 0 9 chr13 114847993 114848104 -5436208 + (TA)n Simple_repeat Simple_repeat 1 110 0 5 1461 50 51 0 0 chr13 114848104 114848182 -5436130 + AT_rich Low_complexity Low_complexity 1 78 0 5 1461 802 259 91 47 chr13 114848405 114848681 -5435631 + B4 SINE B4 5 292 0 5 1461 246 32 0 0 chr13 114849066 114849097 -5435215 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1461 423 0 0 0 chr13 114849237 114849284 -5435028 + (GA)n Simple_repeat Simple_repeat 1 47 0 5 1461 1315 67 44 11 chr13 114850858 114851040 -5433272 - B2_Mm1t SINE B2 -5 188 1 5 1461 306 326 7 47 chr13 114851686 114851834 -5432478 + MIR SINE MIR 92 233 -29 5 1461 835 310 103 55 chr13 114853232 114853744 -5430568 + Tigger7 DNA MER2_type 66 602 -1889 5 1461 438 271 56 21 chr13 114854978 114855121 -5429191 - RSINE1 SINE B4 -2 163 16 5 1461 3175 47 39 0 chr13 114855891 114856276 -5428036 + MTB LTR MaLR 1 400 0 5 1461 329 236 61 3 chr13 114856418 114856517 -5427795 - MER45R DNA Tip100 -1399 182 82 5 1461 283 165 12 25 chr13 114858054 114858120 -5426192 + CT-rich Low_complexity Low_complexity 16 82 0 5 1461 1086 95 0 0 chr13 114858120 114858268 -5426044 - B1_Mus1 SINE Alu 0 148 1 5 1461 283 165 12 25 chr13 114858268 114858282 -5426030 + polypyrimidine Low_complexity Low_complexity 3 15 0 5 1461 513 0 0 0 chr13 114858295 114858352 -5425960 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1461 701 180 0 36 chr13 114858352 114858490 -5425822 - B1_Mur2 SINE Alu -10 139 7 5 1461 1160 200 70 4 chr13 114858525 114858781 -5425531 - MTC LTR MaLR -148 273 1 5 1461 195 42 0 0 chr13 114859347 114859371 -5424941 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5 1461 759 284 45 106 chr13 114860710 114860965 -5423347 - B4 SINE B4 0 292 41 5 1461 1640 26 5 5 chr13 114860965 114861157 -5423155 - B2_Mm1a SINE B2 0 193 2 5 1461 759 284 45 106 chr13 114861157 114861212 -5423100 - B4 SINE B4 -252 40 1 5 1461 393 270 194 23 chr13 114861886 114862143 -5422169 - L1MA4 LINE L1 -173 6007 5714 5 1461 1627 42 0 0 chr13 114862636 114862825 -5421487 - B2_Mm1t SINE B2 -3 190 2 5 1461 267 133 150 0 chr13 114862905 114862965 -5421347 + URR1B DNA MER1_type 157 225 0 5 1461 589 292 96 114 chr13 114862974 114863472 -5420840 - RLTR18B LTR ERVK -114 502 14 5 1461 1316 82 0 2 chr13 114863721 114864164 -5420148 + (TC)n Simple_repeat Simple_repeat 1 442 0 5 1461 195 173 0 0 chr13 114864534 114864586 -5419726 + T-rich Low_complexity Low_complexity 1 52 0 5 1461 180 125 0 0 chr13 114865242 114865274 -5419038 + (A)n Simple_repeat Simple_repeat 1 32 0 5 1461 613 181 37 15 chr13 114865275 114865410 -5418902 + B1F1 SINE Alu 2 139 -10 5 1461 1198 307 61 32 chr13 114866236 114866764 -5417548 + MER119 DNA MER1_type 38 580 -3 5 1461 24 32 0 0 chr13 114867339 114867370 -5416942 + AT_rich Low_complexity Low_complexity 1 31 0 5 1461 261 0 0 0 chr13 114867469 114867498 -5416814 + (TG)n Simple_repeat Simple_repeat 2 30 0 5 1461 196 345 42 8 chr13 114868533 114868653 -5415659 - MIRb SINE MIR -46 222 99 5 1461 242 0 0 57 chr13 114868839 114868874 -5415438 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 5 1461 545 254 27 64 chr13 114869041 114869260 -5415052 + ID_B1 SINE B4 1 211 -13 5 1461 228 264 119 21 chr13 114869847 114869990 -5414322 + L1MB3 LINE L1 5946 6102 -81 5 1461 225 0 0 0 chr13 114870396 114870421 -5413891 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 5 1461 231 36 0 0 chr13 114870571 114870599 -5413713 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 5 1461 33 0 0 0 chr13 114870630 114870663 -5413649 + AT_rich Low_complexity Low_complexity 1 33 0 5 1461 439 270 98 33 chr13 114870678 114870862 -5413450 - B3A SINE B2 -11 205 10 5 1461 29 47 0 0 chr13 114872028 114872071 -5412241 + AT_rich Low_complexity Low_complexity 1 43 0 5 1461 209 184 41 0 chr13 114872071 114872120 -5412192 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 5 1461 378 0 0 0 chr13 114872126 114872168 -5412144 + (CA)n Simple_repeat Simple_repeat 1 42 0 5 1461 273 22 65 0 chr13 114872574 114872620 -5411692 + (CA)n Simple_repeat Simple_repeat 1 49 0 5 1461 457 160 0 4 chr13 114873448 114873543 -5410769 - B1_Mur4 SINE Alu -13 107 16 5 1461 1264 263 33 28 chr13 114873741 114874104 -5410208 + MTEa LTR MaLR 9 373 -6 5 1461 245 100 0 20 chr13 114874302 114874353 -5409959 + (TC)n Simple_repeat Simple_repeat 2 51 0 5 1461 186 43 0 0 chr13 114874355 114874378 -5409934 + (CA)n Simple_repeat Simple_repeat 1 23 0 5 1461 483 235 26 0 chr13 114874870 114874985 -5409327 + ID_B1 SINE B4 87 204 -20 5 1461 824 301 22 40 chr13 114875024 114875301 -5409011 + B4A SINE B4 5 276 -16 5 1461 324 0 0 0 chr13 114875333 114875369 -5408943 + (CA)n Simple_repeat Simple_repeat 2 37 0 5 1461 765 151 16 0 chr13 114879112 114879238 -5405074 - B1_Mur4 SINE Alu -21 129 2 5 1461 362 289 69 62 chr13 114879238 114879269 -5405043 - B4 SINE B4 -201 91 60 5 1461 1364 86 38 0 chr13 114879454 114879640 -5404672 + B2_Mm2 SINE B2 3 195 0 5 1461 373 287 87 46 chr13 114881123 114881342 -5402970 - L2 LINE L2 -525 2894 2667 5 1461 1508 168 88 75 chr13 114882812 114883185 -5401127 - ORR1C1 LTR MaLR 0 378 1 5 1461 203 351 0 50 chr13 114883743 114883842 -5400470 - MIRc SINE MIR -146 122 29 5 1461 379 236 64 53 chr13 114884075 114884263 -5400049 - L1MC5 LINE L1 -49 7912 7723 5 1461 216 135 0 0 chr13 114884343 114884380 -5399932 + (A)n Simple_repeat Simple_repeat 1 37 0 5 1461 280 0 50 0 chr13 114886469 114886509 -5397803 + (TGG)n Simple_repeat Simple_repeat 3 44 0 5 1461 295 250 15 0 chr13 114887640 114887708 -5396604 - ID4 SINE ID -11 72 4 5 1461 470 365 38 3 chr13 114888923 114889212 -5395100 + Tigger15a DNA TcMar 180 478 -237 5 1461 1199 28 7 27 chr13 114889877 114890026 -5394286 + B1_Mm SINE Alu 2 147 0 5 1461 198 0 0 0 chr13 114890495 114890517 -5393795 + (A)n Simple_repeat Simple_repeat 1 22 0 5 1461 207 224 0 17 chr13 114891009 114891068 -5393244 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 5 1461 186 43 0 0 chr13 114891452 114891475 -5392837 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1461 290 327 0 60 chr13 114891767 114891884 -5392428 - PB1D10 SINE Alu -2 115 6 5 1461 246 356 55 45 chr13 114892010 114892210 -5392102 + L1MC LINE L1 5641 5842 -2040 5 1461 28 95 0 0 chr13 114892886 114892970 -5391342 + AT_rich Low_complexity Low_complexity 1 84 0 5 1461 8621 132 87 4 chr13 114893584 114895239 -5389073 - ORR1A3-int LTR MaLR -197 1766 1 6 1461 1716 154 42 63 chr13 114895239 114895572 -5388740 - ORR1A3 LTR MaLR 0 326 1 6 1461 765 262 0 0 chr13 114895967 114896131 -5388181 + B3 SINE B2 1 164 -52 6 1461 338 309 10 0 chr13 114897678 114897775 -5386537 + MER5C DNA MER1_type 1 98 -215 6 1461 1213 161 9 0 chr13 114898155 114898373 -5385939 - MTC LTR MaLR -201 220 1 6 1461 509 243 102 20 chr13 114899734 114899881 -5384431 - RSINE1 SINE B4 -4 161 3 6 1461 297 0 0 0 chr13 114900069 114900102 -5384210 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1461 352 192 8 53 chr13 114900385 114900517 -5383795 + C-rich Low_complexity Low_complexity 4 129 0 6 1461 216 0 0 0 chr13 114901358 114901382 -5382930 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1461 1909 37 4 66 chr13 114901735 114901994 -5382318 + L1_Mus2 LINE L1 6315 6557 -9 6 1461 522 0 0 0 chr13 114901994 114902052 -5382260 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 6 1461 402 21 0 0 chr13 114902792 114902839 -5381473 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1461 476 343 42 25 chr13 114902992 114903231 -5381081 + Lx7 LINE L1 6941 7183 -513 6 1461 24 53 0 0 chr13 114904060 114904098 -5380214 + AT_rich Low_complexity Low_complexity 1 38 0 6 1461 440 357 35 18 chr13 114904107 114904278 -5380034 + B3A SINE B2 1 174 -24 6 1461 225 0 0 0 chr13 114904279 114904304 -5380008 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1461 704 291 20 0 chr13 114904486 114904685 -5379627 + B3 SINE B2 10 212 -4 6 1461 396 0 0 0 chr13 114905891 114905935 -5378377 + (TC)n Simple_repeat Simple_repeat 1 44 0 6 1461 180 111 0 0 chr13 114906584 114906611 -5377701 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1461 255 287 66 23 chr13 114906732 114906835 -5377477 + MIRb SINE MIR 12 124 -144 6 1461 288 0 0 0 chr13 114906916 114906948 -5377364 + (CA)n Simple_repeat Simple_repeat 1 32 0 6 1461 4418 40 36 2 chr13 114907598 114908125 -5376187 - L1Md_F2 LINE L1 -11 6571 6027 6 1461 972 34 0 8 chr13 114908125 114908235 -5376077 + L1Md_F2 LINE L1 5910 6019 -563 6 1461 304 287 11 0 chr13 114909721 114909808 -5374504 + B3 SINE B2 40 127 -89 6 1461 189 0 0 0 chr13 114910071 114910092 -5374220 + (T)n Simple_repeat Simple_repeat 1 21 0 6 1461 234 150 0 0 chr13 114911392 114911432 -5372880 + (TCC)n Simple_repeat Simple_repeat 3 42 0 6 1461 189 312 77 13 chr13 114913479 114913557 -5370755 - MIRb SINE MIR -123 145 63 6 1461 474 124 0 0 chr13 114913825 114913914 -5370398 + (GA)n Simple_repeat Simple_repeat 2 90 0 6 1461 1162 48 0 39 chr13 114915962 114916115 -5368197 - B1_Mus2 SINE Alu 0 147 1 6 1461 1648 32 0 0 chr13 114916115 114916302 -5368010 - B2_Mm1a SINE B2 -4 189 2 6 1461 703 226 156 0 chr13 114918699 114918885 -5365427 - B3 SINE B2 0 216 2 6 1461 209 297 0 0 chr13 114919199 114919263 -5365049 + A-rich Low_complexity Low_complexity 1 64 0 6 1461 180 0 0 0 chr13 114919314 114919334 -5364978 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 6 1461 1202 48 14 0 chr13 114919487 114919632 -5364680 + B1_Mus2 SINE Alu 1 147 0 6 1461 203 88 29 0 chr13 114920022 114920056 -5364256 + (CCCCCA)n Simple_repeat Simple_repeat 3 37 0 6 1461 243 0 0 0 chr13 114920738 114920765 -5363547 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1461 21 36 0 0 chr13 114920827 114920855 -5363457 + AT_rich Low_complexity Low_complexity 1 28 0 6 1461 1188 35 14 0 chr13 114922608 114922753 -5361559 + B1_Mm SINE Alu 1 147 0 6 1461 198 0 0 0 chr13 114924276 114924298 -5360014 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 6 1461 252 295 85 10 chr13 114924489 114924612 -5359700 - MIR SINE MIR -110 158 29 6 1461 243 259 25 59 chr13 114924813 114924932 -5359380 + L2a LINE L2 3242 3356 -70 6 1461 319 301 88 0 chr13 114925262 114925375 -5358937 - ID_B1 SINE B4 0 224 102 6 1461 393 22 0 0 chr13 114926458 114926504 -5357808 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1461 460 272 106 21 chr13 114926937 114927125 -5357187 + L1M5 LINE L1 5369 5572 -607 6 1461 1389 136 4 26 chr13 114928260 114928487 -5355825 - URR1A DNA MER1_type 0 226 5 6 1461 661 167 0 9 chr13 114930702 114930811 -5353501 + PB1D9 SINE Alu 2 109 -11 6 1461 650 35 12 0 chr13 114930811 114930896 -5353416 + (GAAAA)n Simple_repeat Simple_repeat 2 87 0 6 1461 510 17 0 0 chr13 114930956 114931015 -5353297 + (TG)n Simple_repeat Simple_repeat 2 60 0 6 1461 457 329 111 48 chr13 114931373 114931813 -5352499 - Tigger13a DNA MER2_type -111 660 193 6 1461 297 343 37 68 chr13 114932469 114932660 -5351652 - MER20 DNA MER1_type -3 216 32 6 1461 414 0 0 0 chr13 114933520 114933566 -5350746 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1461 312 333 10 0 chr13 114936216 114936315 -5347997 + Lx8 LINE L1 7221 7320 -153 6 1461 23 0 0 0 chr13 114936410 114936433 -5347879 + AT_rich Low_complexity Low_complexity 1 23 0 6 1461 189 0 0 0 chr13 114936666 114936687 -5347625 + (CA)n Simple_repeat Simple_repeat 1 21 0 6 1461 337 243 59 67 chr13 114936690 114936809 -5347503 + L1MB5 LINE L1 3732 3849 -2297 6 1461 690 288 118 35 chr13 114936863 114937150 -5347162 + L1MB5 LINE L1 5615 5927 -247 6 1461 342 0 0 0 chr13 114937150 114937188 -5347124 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1461 690 292 111 42 chr13 114937188 114937403 -5346909 + L1MB5 LINE L1 5928 6139 -45 6 1461 425 294 20 20 chr13 114938277 114938423 -5345889 - MER58B DNA MER1_type -24 317 172 6 1461 290 271 0 127 chr13 114938587 114938697 -5345615 + MT2B LTR ERVL 161 256 -345 6 1461 641 248 15 0 chr13 114938601 114938738 -5345574 + B1_Mur1 SINE Alu 6 144 -5 6 1461 640 259 7 7 chr13 114940512 114940660 -5343652 - B1_Mur1 SINE Alu 0 149 2 6 1461 394 319 68 32 chr13 114941460 114941680 -5342632 + MER20B DNA MER1_type 61 288 -495 6 1461 258 56 0 0 chr13 114943232 114943268 -5341044 + (GTTTG)n Simple_repeat Simple_repeat 2 37 0 6 1461 843 155 0 0 chr13 114943269 114943443 -5340869 + (GGTTG)n Simple_repeat Simple_repeat 1 174 0 6 1461 198 0 0 0 chr13 114943448 114943470 -5340842 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 6 1461 588 221 36 22 chr13 114943482 114943621 -5340691 - B1_Mur1 SINE Alu -8 141 1 6 1461 391 300 13 39 chr13 114943621 114943632 -5340680 - ID_B1 SINE B4 -2 179 71 6 1461 502 192 192 0 chr13 114943699 114943824 -5340488 + B1F2 SINE Alu 1 149 0 6 1461 238 26 0 49 chr13 114944469 114944510 -5339802 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 6 1461 411 73 0 0 chr13 114946634 114946689 -5337623 + (TA)n Simple_repeat Simple_repeat 2 56 0 6 1462 208 271 0 59 chr13 114950560 114950611 -5333701 - L2a LINE L2 -31 3395 3348 6 1462 357 24 0 0 chr13 114950975 114951017 -5333295 + (TG)n Simple_repeat Simple_repeat 1 42 0 6 1462 192 40 0 0 chr13 114951247 114951272 -5333040 + (CAAG)n Simple_repeat Simple_repeat 2 26 0 6 1462 254 288 114 67 chr13 114951325 114951790 -5332522 + L1MC5 LINE L1 7311 7797 -164 6 1462 24 32 0 0 chr13 114952817 114952848 -5331464 + AT_rich Low_complexity Low_complexity 1 31 0 6 1462 495 0 0 0 chr13 114952862 114952917 -5331395 + (TG)n Simple_repeat Simple_repeat 1 55 0 6 1462 308 268 62 0 chr13 114953178 114953275 -5331037 - PB1D10 SINE Alu -14 103 1 6 1462 180 0 0 0 chr13 114953653 114953673 -5330639 + (TTG)n Simple_repeat Simple_repeat 2 21 0 6 1462 1314 91 48 5 chr13 114953932 114954119 -5330193 - B2_Mm2 SINE B2 0 195 1 6 1462 222 118 0 0 chr13 114954858 114954892 -5329420 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 6 1462 367 243 134 5 chr13 114956448 114956634 -5327678 + Charlie5 DNA MER1_type 2393 2602 -22 6 1462 382 230 24 103 chr13 114957561 114957726 -5326586 - RSINE1 SINE B4 0 165 14 6 1462 432 0 0 0 chr13 114957728 114957776 -5326536 + (TC)n Simple_repeat Simple_repeat 2 49 0 6 1462 396 0 0 0 chr13 114957776 114957819 -5326493 + (TG)n Simple_repeat Simple_repeat 1 44 0 6 1462 742 263 4 135 chr13 114958439 114958676 -5325636 + ID_B1 SINE B4 6 211 -13 6 1462 1055 94 0 22 chr13 114958690 114958874 -5325438 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1462 463 255 110 58 chr13 114958915 114959069 -5325243 + RSINE1 SINE B4 3 164 -1 6 1462 608 143 3 1 chr13 114959214 114959329 -5324983 + B1_Mm SINE Alu 33 148 -1 6 1462 1044 151 0 0 chr13 114959330 114959509 -5324803 + GA-rich Low_complexity Low_complexity 1 179 0 6 1462 234 0 0 0 chr13 114959509 114959535 -5324777 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 6 1462 210 37 0 0 chr13 114959814 114959841 -5324471 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 6 1462 333 0 0 0 chr13 114959962 114959999 -5324313 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 6 1462 801 189 0 0 chr13 114960000 114960132 -5324180 - B1_Mus1 SINE Alu -12 136 5 6 1462 378 0 0 0 chr13 114960750 114960792 -5323520 + (CA)n Simple_repeat Simple_repeat 2 43 0 6 1462 585 0 0 0 chr13 114961607 114961672 -5322640 + (TCC)n Simple_repeat Simple_repeat 2 66 0 6 1462 844 256 23 9 chr13 114961832 114962053 -5322259 + ID_B1 SINE B4 1 224 0 6 1462 5808 198 67 51 chr13 114962128 114963327 -5320985 + Lx9 LINE L1 6295 7476 -168 6 1462 414 0 0 0 chr13 114963327 114963373 -5320939 + (TG)n Simple_repeat Simple_repeat 2 47 0 6 1462 5808 198 67 51 chr13 114963373 114963501 -5320811 + Lx9 LINE L1 7477 7642 -2 6 1462 209 349 94 0 chr13 114963572 114963678 -5320634 + MIRb SINE MIR 121 236 -32 6 1462 324 236 28 0 chr13 114963918 114963990 -5320322 + ID4_ SINE ID 4 77 -6 6 1462 279 0 0 0 chr13 114964215 114964246 -5320066 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1462 2538 286 59 32 chr13 114964367 114965356 -5318956 - L1MC1 LINE L1 -27 6481 5467 6 1462 315 0 0 0 chr13 114965391 114965426 -5318886 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 6 1462 482 265 76 113 chr13 114965426 114965558 -5318754 - L1MC1 LINE L1 -3227 3094 2955 6 1462 416 284 90 45 chr13 114965558 114965713 -5318599 + RSINE1 SINE B4 4 165 0 7 1462 482 265 76 113 chr13 114965713 114965950 -5318362 - L1MC1 LINE L1 -3367 2954 2739 6 1462 309 320 20 10 chr13 114965964 114966065 -5318247 - PB1D7 SINE Alu -3 117 16 7 1462 762 223 112 15 chr13 114966083 114966279 -5318033 - B3 SINE B2 0 216 2 7 1462 3489 265 88 21 chr13 114966286 114967475 -5316837 - L1MC1 LINE L1 -4869 1639 371 6 1462 368 286 80 26 chr13 114967558 114967965 -5316347 - L1MC LINE L1 -624 5555 5124 7 1462 566 198 12 12 chr13 114967979 114968143 -5316169 + (TG)n Simple_repeat Simple_repeat 2 165 0 7 1462 341 323 78 68 chr13 114968276 114968482 -5315830 + B3 SINE B2 4 211 -5 7 1462 712 171 139 0 chr13 114969480 114969609 -5314703 + B1_Mur4 SINE Alu 4 150 0 7 1462 714 299 123 57 chr13 114969609 114970433 -5313879 - L1MC5 LINE L1 -51 7910 7033 7 1462 242 278 103 0 chr13 114970914 114971011 -5313301 - MLT1C LTR MaLR -354 113 7 7 1462 282 299 42 17 chr13 114971092 114971211 -5313101 - L1MC5 LINE L1 -1229 6732 6611 7 1462 793 289 5 5 chr13 114971602 114971811 -5312501 - B3 SINE B2 -5 211 3 7 1462 459 312 82 35 chr13 114971831 114972087 -5312225 - L1MC5 LINE L1 0 6333 6066 7 1462 592 192 61 53 chr13 114972133 114972265 -5312047 - B1_Mur1 SINE Alu -10 139 7 7 1462 459 316 6 37 chr13 114972305 114972469 -5311843 - B3A SINE B2 -4 194 36 7 1462 1440 33 5 5 chr13 114972496 114972681 -5311631 - L1Md_F2 LINE L1 0 6582 6398 7 1462 570 282 66 29 chr13 114972900 114973141 -5311171 - L1M4 LINE L1 -1932 4214 3965 7 1462 327 165 266 0 chr13 114973194 114973273 -5311039 - PB1D9 SINE Alu 0 120 21 7 1462 597 289 60 51 chr13 114973305 114973637 -5310675 - L1M4 LINE L1 -2181 3965 3631 7 1462 2554 109 3 0 chr13 114973663 114974013 -5310299 - Lx4A LINE L1 -330 6728 6378 7 1462 1988 134 77 9 chr13 114974013 114974352 -5309960 + Lx4A LINE L1 6697 7058 0 7 1462 271 65 21 21 chr13 114974352 114974399 -5309913 + (GAAAA)n Simple_repeat Simple_repeat 2 48 0 7 1462 25 0 0 0 chr13 114974403 114974428 -5309884 + AT_rich Low_complexity Low_complexity 1 25 0 7 1462 609 260 33 0 chr13 114974473 114974623 -5309689 - RSINE1 SINE B4 -8 157 3 7 1462 317 319 119 72 chr13 114974665 114974983 -5309329 - L1MC5 LINE L1 -2097 5785 5453 7 1462 396 0 0 0 chr13 114975155 114975199 -5309113 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 7 1462 207 0 0 0 chr13 114975679 114975702 -5308610 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 7 1462 946 132 7 14 chr13 114975716 114975862 -5308450 - B1_Mus2 SINE Alu 0 147 3 7 1462 646 266 13 0 chr13 114977433 114977591 -5306721 + ID_B1 SINE B4 2 161 -63 7 1462 419 243 48 19 chr13 114977516 114977621 -5306691 + PB1D10 SINE Alu 6 113 -4 7 1462 466 177 115 0 chr13 114977717 114977830 -5306482 + B1_Mur4 SINE Alu 19 144 -6 7 1462 192 125 0 0 chr13 114977835 114977867 -5306445 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 7 1462 205 357 107 0 chr13 114978806 114978918 -5305394 + MIR SINE MIR 49 172 -90 7 1462 330 26 0 0 chr13 114979770 114979809 -5304503 + (GCTG)n Simple_repeat Simple_repeat 1 39 0 7 1462 22 0 0 0 chr13 114980033 114980055 -5304257 + AT_rich Low_complexity Low_complexity 1 22 0 7 1462 349 260 58 103 chr13 114981632 114981855 -5302457 - L1MB3 LINE L1 -24 6147 5935 7 1462 223 214 0 0 chr13 114981860 114981902 -5302410 + ID4 SINE ID 32 73 -10 7 1462 676 261 192 35 chr13 114981927 114982245 -5302067 - L1MB3 LINE L1 -269 5914 5547 7 1462 315 0 0 0 chr13 114982856 114982891 -5301421 + (CA)n Simple_repeat Simple_repeat 2 36 0 7 1462 621 40 0 0 chr13 114982891 114982966 -5301346 + (GA)n Simple_repeat Simple_repeat 2 77 0 7 1462 260 188 14 0 chr13 114984273 114984342 -5299970 + CT-rich Low_complexity Low_complexity 3 72 0 7 1462 366 23 0 0 chr13 114984980 114985023 -5299289 + (TC)n Simple_repeat Simple_repeat 1 43 0 7 1462 2229 202 61 22 chr13 114985209 114985716 -5298596 + RLTR11A2 LTR ERVK 1 527 0 7 1462 1575 184 80 14 chr13 114985905 114986268 -5298044 + MTC LTR MaLR 3 389 -32 7 1462 1849 139 35 0 chr13 114986268 114986578 -5297734 + ORR1A4 LTR MaLR 1 321 -8 7 1462 529 181 40 9 chr13 114986633 114986781 -5297531 - B3 SINE B2 -29 166 9 7 1462 611 241 14 80 chr13 114986808 114987020 -5297292 - B3A SINE B2 0 198 1 7 1462 844 196 12 18 chr13 114990113 114990279 -5294033 - MER5A1 DNA MER1_type -1 165 1 7 1462 210 227 0 22 chr13 114990761 114990806 -5293506 - MIRm SINE MIR -13 263 220 7 1462 183 156 0 0 chr13 114992467 114992499 -5291813 + T-rich Low_complexity Low_complexity 1 32 0 7 1462 219 139 0 0 chr13 114992776 114992812 -5291500 + (TG)n Simple_repeat Simple_repeat 2 37 0 7 1462 847 284 143 6 chr13 114992812 114993127 -5291185 - Lx8 LINE L1 -488 6985 6628 7 1462 2303 163 131 14 chr13 114993177 114993709 -5290603 + RLTR17 LTR ERVK 99 692 0 7 1462 370 250 77 0 chr13 114993728 114993832 -5290480 - Lx8 LINE L1 -1060 6413 6302 7 1462 405 56 0 0 chr13 114994071 114994125 -5290187 - B2_Mm2 SINE B2 -141 54 1 7 1462 328 281 16 32 chr13 114994280 114994405 -5289907 - Lx9 LINE L1 -1686 5958 5836 7 1462 911 282 72 28 chr13 114994404 114994791 -5289521 + Lx9 LINE L1 5392 5795 -52 7 1462 1194 28 0 7 chr13 114994935 114995081 -5289231 + B1_Mus2 SINE Alu 1 145 -2 7 1462 432 0 0 0 chr13 114995081 114995129 -5289183 + (TAA)n Simple_repeat Simple_repeat 2 49 0 7 1462 536 175 104 9 chr13 114996792 114996907 -5287405 + B1_Mur3 SINE Alu 21 146 -3 7 1462 753 142 0 0 chr13 114997179 114997306 -5287006 + (GGA)n Simple_repeat Simple_repeat 3 129 0 7 1462 546 57 0 0 chr13 114997302 114997372 -5286940 + (GAAA)n Simple_repeat Simple_repeat 3 72 0 7 1462 231 36 0 0 chr13 114997423 114997451 -5286861 + (A)n Simple_repeat Simple_repeat 1 28 0 7 1462 312 327 73 32 chr13 114997452 114997670 -5286642 + L1M6 LINE L1 1526 1752 -4744 7 1462 368 317 0 0 chr13 114997708 114997812 -5286500 + MER44B DNA MER2_type 2 105 -445 7 1462 617 323 141 24 chr13 114998123 114998535 -5285777 - LTR16B1 LTR ERVL -15 465 6 7 1462 456 332 155 10 chr13 114998565 114998978 -5285334 + MER44B DNA MER2_type 68 540 -10 7 1462 243 0 0 0 chr13 114999159 114999186 -5285126 + (T)n Simple_repeat Simple_repeat 1 27 0 7 1462 1843 254 28 20 chr13 114999440 114999997 -5284315 - Lx8 LINE L1 -1553 5920 5327 7 1462 1046 288 94 9 chr13 115000017 115000462 -5283850 - L1M2 LINE L1 -792 5351 4869 1 1462 798 240 0 0 chr13 115000486 115000640 -5283672 - RSINE1 SINE B4 -9 156 3 2 1462 1646 198 65 26 chr13 115000898 115001313 -5282999 - Lx6 LINE L1 -1315 6145 5715 3 1462 1735 251 48 28 chr13 115001314 115002187 -5282125 + Lx5 LINE L1 6184 6975 -75 4 1462 1365 160 14 0 chr13 115004393 115004612 -5279700 - URR1A DNA MER1_type 0 226 5 5 1462 243 266 12 25 chr13 115004756 115004837 -5279475 + MER5B DNA MER1_type 23 102 -76 6 1462 895 306 54 86 chr13 115005846 115006346 -5277966 + MLT2B2 LTR ERVL 22 505 -10 7 1462 25 31 0 0 chr13 115006372 115006404 -5277908 + AT_rich Low_complexity Low_complexity 1 32 0 8 1462 381 329 49 40 chr13 115010469 115010694 -5273618 + MLT1K LTR MaLR 110 336 -259 9 1462 501 260 61 55 chr13 115011021 115011184 -5273128 + RMER30 DNA MER1_type 7 170 -32 1 1462 760 96 0 9 chr13 115011499 115011615 -5272697 + B1_Mus1 SINE Alu 34 148 0 1 1462 419 294 62 23 chr13 115011623 115011752 -5272560 + ID_B1 SINE B4 24 157 -67 1 1462 339 305 17 0 chr13 115011756 115011874 -5272438 - L1MB8 LINE L1 -210 5968 5849 1 1462 304 280 119 15 chr13 115011922 115012056 -5272256 - Charlie4z DNA MER1_type -5 162 15 1 1462 180 0 0 0 chr13 115012455 115012475 -5271837 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1 1462 243 0 0 0 chr13 115012762 115012789 -5271523 + (TG)n Simple_repeat Simple_repeat 2 28 0 1 1462 21 57 0 0 chr13 115012789 115012824 -5271488 + AT_rich Low_complexity Low_complexity 1 35 0 1 1462 377 340 0 0 chr13 115014634 115014737 -5269575 + PB1D10 SINE Alu 1 103 -14 1 1462 622 187 246 0 chr13 115015704 115015875 -5268437 + URR1A DNA MER1_type 1 213 -13 1 1462 563 188 168 29 chr13 115016338 115016475 -5267837 + B3A SINE B2 1 156 -42 2 1462 348 24 0 0 chr13 115017883 115017924 -5266388 + (CA)n Simple_repeat Simple_repeat 1 41 0 2 1462 279 278 89 40 chr13 115019488 115019589 -5264723 + RSINE1 SINE B4 60 165 0 2 1462 580 231 29 44 chr13 115019893 115020029 -5264283 + B1_Mur2 SINE Alu 2 135 -14 2 1462 446 299 0 8 chr13 115020157 115020275 -5264037 - PB1D10 SINE Alu 0 117 1 2 1462 455 217 17 0 chr13 115020306 115020426 -5263886 + (CATA)n Simple_repeat Simple_repeat 3 124 0 2 1462 738 177 29 0 chr13 115020438 115020613 -5263699 + (CATA)n Simple_repeat Simple_repeat 1 180 0 2 1462 547 250 0 0 chr13 115020632 115020752 -5263560 - RSINE1 SINE B4 -45 120 1 2 1462 185 208 12 38 chr13 115021755 115021835 -5262477 + (CATA)n Simple_repeat Simple_repeat 4 81 0 2 1462 340 274 72 12 chr13 115021847 115022013 -5262299 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 2 1462 405 278 39 28 chr13 115021929 115022107 -5262205 + (CA)n Simple_repeat Simple_repeat 1 180 0 2 1462 297 0 0 0 chr13 115022147 115022180 -5262132 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1462 1722 181 33 22 chr13 115022537 115022898 -5261414 + ORR1C1 LTR MaLR 3 367 -11 3 1462 180 0 0 0 chr13 115023442 115023462 -5260850 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1462 1071 191 17 30 chr13 115023553 115023790 -5260522 - MTD LTR MaLR 0 419 186 3 1462 183 42 0 0 chr13 115023932 115023956 -5260356 + (TG)n Simple_repeat Simple_repeat 2 25 0 3 1462 633 172 193 0 chr13 115024030 115024175 -5260137 - MTD LTR MaLR -244 175 3 3 1462 324 70 0 0 chr13 115024347 115024390 -5259922 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1462 589 206 167 0 chr13 115024976 115025102 -5259210 + B1_Mus2 SINE Alu 1 147 0 3 1462 651 134 0 30 chr13 115025109 115025240 -5259072 + GA-rich Low_complexity Low_complexity 2 128 0 3 1462 2293 78 0 0 chr13 115025306 115025625 -5258687 - ORR1A2 LTR MaLR -8 319 1 3 1462 288 0 0 0 chr13 115025896 115025928 -5258384 + (CA)n Simple_repeat Simple_repeat 2 33 0 3 1462 180 0 0 0 chr13 115025997 115026017 -5258295 + (TG)n Simple_repeat Simple_repeat 2 21 0 3 1462 2817 62 16 3 chr13 115026414 115026800 -5257512 + MTA_Mm LTR MaLR 1 391 -5 4 1462 1120 59 0 0 chr13 115026800 115026936 -5257376 + B1_Mus1 SINE Alu 1 136 -12 4 1462 252 0 0 0 chr13 115026939 115026967 -5257345 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 4 1462 232 37 54 36 chr13 115027925 115027981 -5256331 + (TG)n Simple_repeat Simple_repeat 2 58 0 4 1462 248 241 121 44 chr13 115027985 115028076 -5256236 - B4 SINE B4 -27 265 168 4 1462 343 298 106 32 chr13 115028290 115028536 -5255776 - L1MD3 LINE L1 -13 7982 7719 4 1462 249 303 0 0 chr13 115029090 115029156 -5255156 + (TG)n Simple_repeat Simple_repeat 1 66 0 4 1462 567 304 45 21 chr13 115029210 115029452 -5254860 - B4A SINE B4 -43 249 2 4 1462 1401 299 96 50 chr13 115029491 115029735 -5254577 - L1M3e LINE L1 -2925 4178 3917 4 1462 2088 183 10 18 chr13 115029735 115030130 -5254182 - ORR1B1 LTR MaLR 0 394 3 4 1462 1401 299 96 50 chr13 115030130 115030850 -5253462 - L1M3e LINE L1 -3187 3916 3170 4 1462 23 0 0 0 chr13 115030964 115030987 -5253325 + AT_rich Low_complexity Low_complexity 1 23 0 5 1462 765 177 13 45 chr13 115031204 115031358 -5252954 + B1_Mur2 SINE Alu 1 149 0 5 1462 1054 189 40 0 chr13 115031526 115031727 -5252585 - B3 SINE B2 -2 214 6 5 1462 364 314 129 72 chr13 115031860 115031972 -5252340 - L1M3e LINE L1 -4627 2481 2403 4 1462 1122 63 28 0 chr13 115031972 115032114 -5252198 - B1_Mus1 SINE Alu 0 148 3 5 1462 920 314 107 51 chr13 115032114 115033473 -5250839 - L1M3e LINE L1 -4528 2509 1336 4 1462 426 267 37 80 chr13 115033544 115033707 -5250605 - L1M3e LINE L1 -6003 1027 872 4 1462 1741 188 32 43 chr13 115033787 115034160 -5250152 - ORR1D1 LTR MaLR -5 369 1 5 1462 692 302 97 88 chr13 115034194 115034633 -5249679 - L1M3e LINE L1 -6468 562 109 4 1462 1618 32 16 0 chr13 115034633 115034823 -5249489 - B2_Mm1a SINE B2 0 193 1 5 1462 692 302 97 88 chr13 115034823 115034939 -5249373 - L1M3e LINE L1 -6922 108 2 4 1462 1036 236 178 14 chr13 115034958 115035306 -5249006 - MTD LTR MaLR -14 405 1 5 1462 189 286 0 0 chr13 115035385 115035448 -5248864 + (TG)n Simple_repeat Simple_repeat 2 64 0 5 1462 532 159 18 27 chr13 115035534 115035644 -5248668 + B1_Mur3 SINE Alu 35 143 -6 5 1462 237 33 0 0 chr13 115035647 115035677 -5248635 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 5 1462 343 277 165 57 chr13 115035732 115035908 -5248404 - B3A SINE B2 -2 196 2 6 1462 993 17 0 0 chr13 115036448 115036563 -5247749 + (TA)n Simple_repeat Simple_repeat 2 116 0 6 1462 988 52 0 36 chr13 115036563 115036702 -5247610 - L1Md_F2 LINE L1 -21 6561 6428 6 1462 19004 96 31 29 chr13 115036693 115040160 -5244152 - L1Md_F LINE L1 -2156 3727 276 6 1462 1552 253 22 88 chr13 115040162 115040665 -5243647 - RMER19C LTR ERVK -4 607 138 6 1462 569 297 0 54 chr13 115040707 115040874 -5243438 + RSINE1 SINE B4 2 159 -6 6 1462 324 83 0 0 chr13 115040880 115040928 -5243384 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1462 261 223 21 11 chr13 115040932 115041027 -5243285 + GA-rich Low_complexity Low_complexity 2 97 0 6 1462 752 239 78 24 chr13 115042088 115042294 -5242018 + ID_B1 SINE B4 6 222 -2 6 1462 361 294 0 0 chr13 115042503 115042588 -5241724 - RSINE1 SINE B4 -23 142 58 6 1462 267 348 42 0 chr13 115043313 115043431 -5240881 - RMER15 LTR ERVL -2 573 451 7 1462 251 174 11 34 chr13 115043465 115043554 -5240758 + (CA)n Simple_repeat Simple_repeat 2 88 0 7 1462 546 288 12 48 chr13 115043692 115043860 -5240452 + B3A SINE B2 1 162 -36 7 1462 695 216 103 44 chr13 115044003 115044206 -5240106 + B3 SINE B2 2 216 0 7 1462 3485 60 36 0 chr13 115045777 115046227 -5238085 + L1_Mus3 LINE L1 6171 6636 -2 7 1462 893 258 40 37 chr13 115046460 115046727 -5237585 + ORR1E LTR MaLR 1 301 -78 7 1462 841 284 109 7 chr13 115046761 115047109 -5237203 + ORR1E-int LTR MaLR 2 414 -1166 7 1462 742 173 39 144 chr13 115047097 115047204 -5237108 + ORR1E-int LTR MaLR 1308 1392 -188 7 1462 8384 77 46 11 chr13 115047204 115047675 -5236637 - Lx2 LINE L1 0 6997 6526 7 1462 2742 22 0 42 chr13 115047675 115048011 -5236301 - RLTRETN_Mm LTR ERVK 0 322 1 7 1462 8384 77 46 11 chr13 115048011 115048703 -5235609 - Lx2 LINE L1 -472 6525 5793 7 1462 742 173 39 144 chr13 115048703 115048842 -5235470 + ORR1E-int LTR MaLR 1393 1527 -53 7 1462 521 290 148 10 chr13 115048842 115049051 -5235261 + ORR1E LTR MaLR 1 238 -121 7 1462 245 274 95 16 chr13 115049848 115049974 -5234338 - L1MB4 LINE L1 0 6184 6049 7 1462 366 243 26 111 chr13 115049984 115050137 -5234175 + MLT1D LTR MaLR 6 145 -360 8 1462 299 218 48 24 chr13 115050218 115050367 -5233945 - L1MB4 LINE L1 -111 6078 5928 7 1462 639 232 52 24 chr13 115050599 115050851 -5233461 - L1M4b LINE L1 -5564 1770 1512 8 1462 277 163 0 20 chr13 115050863 115050913 -5233399 + RSINE1 SINE B4 1 49 -116 8 1462 859 296 56 42 chr13 115050913 115051590 -5232722 - L1MB4 LINE L1 -284 5896 5217 7 1462 407 278 45 40 chr13 115051596 115051772 -5232540 - Lx8 LINE L1 0 7473 7297 8 1462 592 282 90 5 chr13 115051766 115051955 -5232357 - Lx8 LINE L1 -326 7147 6943 8 1462 364 297 47 83 chr13 115052042 115052068 -5232244 + B4A SINE B4 62 81 -211 8 1462 871 160 7 0 chr13 115052068 115052212 -5232100 + B1_Mus1 SINE Alu 3 147 -1 8 1462 836 296 4 9 chr13 115052226 115052451 -5231861 - Lx8 LINE L1 -615 6858 6635 8 1462 637 246 183 57 chr13 115052453 115052913 -5231399 - L1MB4 LINE L1 -904 5236 4719 7 1462 720 179 61 6 chr13 115052919 115053082 -5231230 - MYSERV16_I-int LTR ERVK -112 2214 2043 8 1462 6402 177 41 44 chr13 115053073 115054491 -5229821 - RMER3D-int LTR ERVK -415 2427 1015 8 1462 443 138 12 24 chr13 115054553 115054635 -5229677 - RMER3D-int LTR ERVK -2277 565 485 8 1462 832 102 0 23 chr13 115054678 115054809 -5229503 - B2_Mm2 SINE B2 -67 128 1 8 1462 257 273 25 38 chr13 115054838 115054918 -5229394 - RMER3D-int LTR ERVK -2568 274 196 8 1462 1285 219 89 49 chr13 115054886 115055381 -5228931 - RMER3D-int LTR ERVK -1993 849 1 8 1462 2685 169 48 4 chr13 115055381 115055879 -5228433 - RLTR17 LTR ERVK 0 692 173 8 1462 585 251 161 18 chr13 115055882 115055912 -5228400 - L1M3 LINE L1 -1371 4769 4728 8 1462 222 37 0 0 chr13 115055912 115055939 -5228373 + (TAA)n Simple_repeat Simple_repeat 1 27 0 9 1462 585 251 161 18 chr13 115055939 115056237 -5228075 - L1M3 LINE L1 -1413 4727 4395 8 1462 300 178 0 0 chr13 115056346 115056419 -5227893 + CT-rich Low_complexity Low_complexity 2 74 0 9 1462 569 14 14 0 chr13 115056507 115056577 -5227735 + (GA)n Simple_repeat Simple_repeat 2 72 0 9 1462 309 288 171 12 chr13 115056595 115056841 -5227471 - L1M3 LINE L1 -1899 4241 3957 8 1462 464 278 33 9 chr13 115056866 115057012 -5227300 - B1F SINE Alu -1 148 1 9 1462 439 274 32 8 chr13 115057043 115057168 -5227144 - B1F SINE Alu -9 140 13 9 1462 1418 288 179 12 chr13 115057192 115058331 -5225981 - L1M3 LINE L1 -2215 3925 2597 8 1462 583 196 0 47 chr13 115058466 115058573 -5225739 - PB1D9 SINE Alu -1 119 18 9 1462 728 139 35 6 chr13 115058918 115059091 -5225221 + CT-rich Low_complexity Low_complexity 2 179 0 9 1462 278 230 110 2 chr13 115059116 115059191 -5225121 - PB1D10 SINE Alu -49 100 17 9 1462 3479 25 2 0 chr13 115060018 115060413 -5223899 - MTA_Mm LTR MaLR 0 396 1 9 1462 1111 55 0 33 chr13 115060655 115060805 -5223507 + B1_Mus1 SINE Alu 4 148 0 9 1462 243 88 0 0 chr13 115060805 115060839 -5223473 + (A)n Simple_repeat Simple_repeat 1 34 0 1 1462 351 0 0 0 chr13 115060850 115060889 -5223423 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1462 186 43 0 0 chr13 115061657 115061680 -5222632 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1 1462 395 267 89 35 chr13 115062301 115062558 -5221754 - L1M2 LINE L1 -4348 2501 2265 1 1462 380 55 18 0 chr13 115062937 115062992 -5221320 + (CAA)n Simple_repeat Simple_repeat 2 57 0 1 1462 559 241 15 15 chr13 115064951 115065086 -5219226 - B1F2 SINE Alu 0 149 15 1 1462 201 74 0 0 chr13 115065216 115065243 -5219069 + (T)n Simple_repeat Simple_repeat 1 27 0 1 1462 636 259 35 0 chr13 115065320 115065463 -5218849 - B1_Mur2 SINE Alu -1 148 1 1 1462 1195 324 151 49 chr13 115065862 115067146 -5217166 - MTE-int LTR MaLR -3 1367 59 1 1462 243 88 0 0 chr13 115067204 115067238 -5217074 + (TG)n Simple_repeat Simple_repeat 1 34 0 1 1462 580 240 8 16 chr13 115067238 115067361 -5216951 - RSINE1 SINE B4 -40 125 4 1 1462 259 271 69 50 chr13 115067406 115067507 -5216805 - MTD LTR MaLR -7 412 310 1 1462 229 51 25 25 chr13 115067777 115067817 -5216495 + (TTTTG)n Simple_repeat Simple_repeat 3 42 0 1 1462 452 319 162 51 chr13 115068034 115068503 -5215809 - L1MC4a LINE L1 -1374 6508 5988 1 1462 277 244 17 28 chr13 115068539 115068662 -5215650 + (TATATG)n Simple_repeat Simple_repeat 5 126 0 1 1462 4390 143 38 64 chr13 115068662 115069421 -5214891 + RLTR13D6 LTR ERVK 1 736 -166 1 1462 225 0 0 0 chr13 115069421 115069446 -5214866 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 1462 4390 143 38 64 chr13 115069446 115069612 -5214700 + RLTR13D6 LTR ERVK 737 901 -1 1 1462 277 244 17 28 chr13 115069612 115069665 -5214647 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 1 1462 2969 115 15 17 chr13 115070360 115070821 -5213491 - RMER6B LTR ERVK 0 461 2 1 1462 285 51 0 0 chr13 115071824 115071863 -5212449 + (T)n Simple_repeat Simple_repeat 1 39 0 1 1462 675 205 31 0 chr13 115071863 115071990 -5212322 - B1_Mur4 SINE Alu 0 150 20 1 1462 251 54 27 0 chr13 115072045 115072082 -5212230 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1462 243 0 0 0 chr13 115072121 115072148 -5212164 + (TCCA)n Simple_repeat Simple_repeat 1 27 0 1 1462 240 229 29 59 chr13 115072148 115072217 -5212095 - ID SINE ID -147 77 11 1 1462 278 221 65 0 chr13 115072890 115072967 -5211345 + L1MC4 LINE L1 6786 6867 -1175 1 1462 214 264 97 0 chr13 115073171 115073243 -5211069 + B2_Mm2 SINE B2 2 80 -115 1 1462 304 285 24 16 chr13 115073284 115073409 -5210903 + L1MC4 LINE L1 7463 7588 -454 1 1462 1065 200 41 0 chr13 115073448 115073643 -5210669 + B3 SINE B2 11 213 -3 1 1462 798 176 35 0 chr13 115073657 115073799 -5210513 + B1_Mus2 SINE Alu 1 147 0 1 1462 1183 102 80 0 chr13 115073875 115074051 -5210261 - B2_Mm2 SINE B2 -5 190 1 1 1462 448 252 10 0 chr13 115074101 115074204 -5210108 + PB1D10 SINE Alu 3 106 -11 1 1462 228 243 143 0 chr13 115074602 115074672 -5209640 + MTEa LTR MaLR 13 92 -287 1 1462 430 253 99 76 chr13 115074723 115074894 -5209418 + MTEa LTR MaLR 201 375 -4 1 1462 22 70 0 0 chr13 115075230 115075273 -5209039 + AT_rich Low_complexity Low_complexity 1 43 0 1 1462 1438 172 40 63 chr13 115076157 115076584 -5207728 - L1_Mur3 LINE L1 -4095 1785 1369 1 1462 1718 220 79 36 chr13 115076580 115077109 -5207203 + Lx7 LINE L1 5652 6203 -1493 1 1462 292 286 27 54 chr13 115077253 115077364 -5206948 - RSINE1 SINE B4 -57 108 1 1 1462 2151 119 40 25 chr13 115078120 115078474 -5205838 + RLTR15 LTR ERVK 1 359 0 1 1462 27 0 0 0 chr13 115079982 115080009 -5204303 + AT_rich Low_complexity Low_complexity 1 27 0 1 1462 186 143 0 0 chr13 115080963 115080998 -5203314 + (T)n Simple_repeat Simple_repeat 1 35 0 1 1463 238 310 0 0 chr13 115081497 115081555 -5202757 + (CA)n Simple_repeat Simple_repeat 1 58 0 1 1463 216 0 0 0 chr13 115082741 115082765 -5201547 + (CCA)n Simple_repeat Simple_repeat 2 25 0 1 1463 765 280 177 11 chr13 115082798 115083318 -5200994 - MER82 DNA MER2_type -33 620 14 1 1463 185 0 0 39 chr13 115083588 115083614 -5200698 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 1 1463 356 273 117 44 chr13 115084182 115084362 -5199950 - RMER5 LTR ERV1 -78 456 264 1 1463 416 253 0 71 chr13 115085029 115085127 -5199185 + RSINE1 SINE B4 34 124 -41 1 1463 459 0 0 0 chr13 115085127 115085178 -5199134 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1463 608 261 15 0 chr13 115085565 115085695 -5198617 - ID_B1 SINE B4 -11 213 82 1 1463 383 310 20 20 chr13 115087563 115087711 -5196601 + B1F1 SINE Alu 2 149 0 1 1463 25 51 0 0 chr13 115088940 115088979 -5195333 + AT_rich Low_complexity Low_complexity 1 39 0 1 1463 283 219 179 9 chr13 115089512 115089618 -5194694 + LTR48 LTR ERV1 74 197 -590 1 1463 215 215 0 15 chr13 115090429 115090495 -5193817 + CT-rich Low_complexity Low_complexity 4 68 0 1 1463 279 0 0 0 chr13 115090508 115090539 -5193773 + (TG)n Simple_repeat Simple_repeat 2 32 0 1 1463 827 168 15 0 chr13 115090539 115090676 -5193636 - B1_Mur4 SINE Alu -10 140 2 1 1463 245 301 91 71 chr13 115090845 115090894 -5193418 + LTR48 LTR ERV1 345 388 -399 1 1463 496 296 19 26 chr13 115090894 115091050 -5193262 + RSINE1 SINE B4 3 157 -8 1 1463 245 301 91 71 chr13 115091050 115091154 -5193158 + LTR48 LTR ERV1 389 501 -286 1 1463 601 220 177 22 chr13 115091271 115091452 -5192860 + B3 SINE B2 2 210 -6 1 1463 2282 248 104 20 chr13 115091835 115092648 -5191664 + Lx9 LINE L1 6592 7637 -7 1 1463 330 26 0 0 chr13 115093148 115093187 -5191125 + (TG)n Simple_repeat Simple_repeat 2 40 0 1 1463 302 304 157 0 chr13 115093187 115093289 -5191023 - RSINE1 SINE B4 -45 120 3 1 1463 222 342 7 111 chr13 115093333 115093468 -5190844 + MIR SINE MIR 63 183 -79 1 1463 609 83 0 0 chr13 115093993 115094077 -5190235 + (TTCC)n Simple_repeat Simple_repeat 1 84 0 1 1463 205 156 0 0 chr13 115094077 115094109 -5190203 + C-rich Low_complexity Low_complexity 1 32 0 1 1463 240 35 0 0 chr13 115094110 115094139 -5190173 + (TCTG)n Simple_repeat Simple_repeat 4 32 0 1 1463 321 333 29 10 chr13 115094139 115094242 -5190070 - PB1D10 SINE Alu -9 108 4 1 1463 1475 160 130 45 chr13 115094484 115094838 -5189474 + ORR1C2 LTR MaLR 1 384 0 1 1463 212 258 16 16 chr13 115095634 115095697 -5188615 - MIR SINE MIR -32 230 168 1 1463 258 284 321 34 chr13 115096210 115096442 -5187870 + RMER15 LTR ERVL 275 573 -2 1 1463 482 256 0 0 chr13 115096679 115096769 -5187543 - B3 SINE B2 -112 104 15 1 1463 213 279 35 88 chr13 115097026 115097140 -5187172 + L3 LINE CR1 4099 4206 -283 1 1463 288 337 0 24 chr13 115097477 115097562 -5186750 - RSINE1 SINE B4 -8 157 75 1 1463 1059 62 7 20 chr13 115097638 115097785 -5186527 + B1_Mus2 SINE Alu 2 146 -1 1 1463 271 103 22 44 chr13 115097790 115097881 -5186431 + A-rich Low_complexity Low_complexity 3 91 0 1 1463 323 235 0 10 chr13 115097903 115098002 -5186310 + GA-rich Low_complexity Low_complexity 2 99 0 1 1463 241 174 29 0 chr13 115098426 115098495 -5185817 + (TG)n Simple_repeat Simple_repeat 2 72 0 1 1463 353 233 0 99 chr13 115098500 115098581 -5185731 - RSINE1 SINE B4 0 165 93 1 1463 365 205 148 59 chr13 115098647 115098782 -5185530 - B1_Mus1 SINE Alu -1 147 1 1 1463 528 275 55 28 chr13 115099237 115099454 -5184858 + ID_B1 SINE B4 2 224 0 1 1463 217 51 25 25 chr13 115101392 115101432 -5182880 + (TA)n Simple_repeat Simple_repeat 1 40 0 1 1463 853 129 40 1 chr13 115101432 115101582 -5182730 - B2_Mm2 SINE B2 -30 163 1 1 1463 26 30 0 0 chr13 115101657 115101690 -5182622 + AT_rich Low_complexity Low_complexity 1 33 0 1 1463 29 47 0 0 chr13 115101713 115101756 -5182556 + AT_rich Low_complexity Low_complexity 1 43 0 1 1463 2443 55 3 3 chr13 115101846 115102156 -5182156 - L1_Mus1 LINE L1 0 6567 6258 1 1463 186 133 0 0 chr13 115102201 115102231 -5182081 + (T)n Simple_repeat Simple_repeat 1 30 0 1 1463 1014 56 0 101 chr13 115102231 115102389 -5181923 - B1_Mm SINE Alu 0 147 6 1 1463 893 235 31 22 chr13 115102416 115102642 -5181670 + ORR1E LTR MaLR 5 232 -127 1 1463 286 273 0 18 chr13 115103319 115103375 -5180937 + RSINE1 SINE B4 6 60 -105 1 1463 526 225 72 129 chr13 115104536 115104745 -5179567 - B3A SINE B2 0 198 2 1 1463 24 32 0 0 chr13 115105012 115105043 -5179269 + AT_rich Low_complexity Low_complexity 1 31 0 1 1463 249 342 38 12 chr13 115105808 115105888 -5178424 - B1F SINE Alu -60 89 8 1 1463 34 0 0 0 chr13 115106316 115106350 -5177962 + AT_rich Low_complexity Low_complexity 1 34 0 1 1463 225 244 0 0 chr13 115106504 115106549 -5177763 + B1_Mur1 SINE Alu 101 145 -4 1 1463 180 135 0 0 chr13 115106814 115106851 -5177461 + (T)n Simple_repeat Simple_repeat 1 37 0 1 1463 935 77 92 0 chr13 115106857 115106987 -5177325 - B1_Mus1 SINE Alu -6 142 1 1 1463 216 97 0 0 chr13 115108071 115108102 -5176210 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1 1463 435 170 95 11 chr13 115108102 115108197 -5176115 - PB1D9 SINE Alu -2 118 16 1 1463 221 325 99 12 chr13 115108135 115108216 -5176096 - B4A SINE B4 -123 169 82 1 1463 368 281 0 0 chr13 115108598 115108680 -5175632 - ID4 SINE ID 0 83 2 1 1463 653 266 27 48 chr13 115108842 115109028 -5175284 - B3A SINE B2 -16 182 1 1 1463 1056 141 85 5 chr13 115110765 115110964 -5173348 - B3 SINE B2 -1 215 1 1 1463 378 0 0 0 chr13 115111441 115111483 -5172829 + (TC)n Simple_repeat Simple_repeat 1 42 0 1 1463 664 273 81 0 chr13 115111993 115112031 -5172281 - B3 SINE B2 -11 205 157 1 1463 369 43 0 0 chr13 115112031 115112078 -5172234 + (TG)n Simple_repeat Simple_repeat 2 48 0 1 1463 664 273 81 0 chr13 115112078 115112211 -5172101 - B3 SINE B2 -60 156 21 1 1463 616 223 41 0 chr13 115112332 115112453 -5171859 + B1_Mus1 SINE Alu 22 147 -1 2 1463 1218 35 0 0 chr13 115112509 115112650 -5171662 - B1_Mm SINE Alu -5 142 2 2 1463 632 304 20 25 chr13 115112962 115113161 -5171151 - B3A SINE B2 0 198 1 2 1463 932 117 7 0 chr13 115113191 115113328 -5170984 - B1_Mus2 SINE Alu -1 146 9 2 1463 391 233 27 122 chr13 115113224 115113371 -5170941 - MT2B LTR ERVL -337 264 132 2 1463 545 131 40 10 chr13 115113504 115113604 -5170708 - B1_Mus2 SINE Alu -44 103 1 2 1463 326 204 68 77 chr13 115113505 115113622 -5170690 - MT2B LTR ERVL -344 257 142 2 1463 337 178 0 0 chr13 115113856 115113929 -5170383 + PB1D9 SINE Alu 47 119 -1 2 1463 1359 124 16 12 chr13 115114065 115114317 -5169995 - L1_Mus3 LINE L1 -2 6636 6384 2 1463 278 280 0 0 chr13 115114652 115114727 -5169585 + MER34 LTR ERV1 399 473 -69 2 1463 484 211 60 68 chr13 115114989 115115106 -5169206 + PB1D9 SINE Alu 3 118 -2 2 1463 522 219 109 0 chr13 115115258 115115377 -5168935 - B1_Mur2 SINE Alu -17 132 1 2 1463 713 273 91 5 chr13 115115394 115115593 -5168719 - B3 SINE B2 0 216 1 2 1463 22 80 0 0 chr13 115115600 115115650 -5168662 + AT_rich Low_complexity Low_complexity 1 50 0 2 1463 22 56 0 0 chr13 115115718 115115754 -5168558 + AT_rich Low_complexity Low_complexity 1 36 0 2 1463 27 0 0 0 chr13 115116122 115116149 -5168163 + AT_rich Low_complexity Low_complexity 1 27 0 2 1463 218 261 36 97 chr13 115116160 115116283 -5168029 + PB1D9 SINE Alu 20 149 0 2 1463 619 308 36 43 chr13 115116303 115116581 -5167731 + B4 SINE B4 1 276 -16 2 1463 300 260 38 9 chr13 115116980 115117085 -5167227 - Tigger13a DNA MER2_type -248 523 416 2 1463 234 330 43 21 chr13 115117291 115117384 -5166928 - MER34 LTR ERV1 -306 236 142 2 1463 1972 174 50 6 chr13 115117644 115118002 -5166310 + MTC LTR MaLR 42 415 -6 2 1463 420 358 40 78 chr13 115118832 115119307 -5165005 + L1MEc LINE L1 770 1226 -5189 2 1463 1024 218 44 10 chr13 115119356 115119560 -5164752 + B3 SINE B2 1 211 -5 2 1463 486 256 64 85 chr13 115119875 115120175 -5164137 + L1M3 LINE L1 4176 4458 -1682 2 1463 1102 71 0 7 chr13 115120175 115120316 -5163996 - B1_Mus2 SINE Alu -5 142 3 2 1463 486 256 64 85 chr13 115120316 115120437 -5163875 + L1M3 LINE L1 4459 4588 -1552 2 1463 315 338 92 72 chr13 115120439 115120592 -5163720 + B4 SINE B4 68 223 -69 2 1463 604 203 61 23 chr13 115120466 115120597 -5163715 + B1_Mur1 SINE Alu 13 148 -1 2 1463 352 282 223 24 chr13 115120597 115120808 -5163504 + L1M3 LINE L1 4596 4848 -1295 2 1463 301 298 80 12 chr13 115120832 115120995 -5163317 + L1M3 LINE L1 5555 5728 -455 2 1463 2462 280 114 45 chr13 115121050 115121175 -5163137 - MTE-int LTR MaLR -62 1518 1392 2 1463 227 31 0 30 chr13 115121175 115121208 -5163104 + (TA)n Simple_repeat Simple_repeat 1 32 0 2 1463 733 204 53 34 chr13 115121211 115121419 -5162893 - B3 SINE B2 -2 214 3 2 1463 2462 280 114 45 chr13 115121419 115122185 -5162127 - MTE-int LTR MaLR -189 1391 561 2 1463 470 223 32 0 chr13 115122189 115122283 -5162029 - B3 SINE B2 -119 97 1 2 1463 888 207 0 53 chr13 115122367 115122556 -5161756 - B3A SINE B2 -16 182 4 2 1463 578 221 110 0 chr13 115122566 115122711 -5161601 - MTE-int LTR MaLR -1286 294 134 2 1463 226 288 40 40 chr13 115122717 115122793 -5161519 - MTE2b LTR MaLR -303 76 1 2 1463 458 298 54 41 chr13 115122874 115123431 -5160881 + L1MEc LINE L1 2255 2817 -3502 2 1463 709 222 31 9 chr13 115123433 115123616 -5160696 + B3 SINE B2 1 193 -2 2 1463 29 47 0 0 chr13 115123618 115123661 -5160651 + AT_rich Low_complexity Low_complexity 1 43 0 2 1463 279 247 0 49 chr13 115123726 115123807 -5160505 + ID4 SINE ID 3 79 -4 2 1463 273 283 162 0 chr13 115124703 115124802 -5159510 + MTE2b LTR MaLR 1 115 -264 2 1463 800 287 60 17 chr13 115124911 115125145 -5159167 + MTE2b LTR MaLR 74 317 -62 2 1463 22 0 0 0 chr13 115125417 115125439 -5158873 + AT_rich Low_complexity Low_complexity 1 22 0 2 1463 378 361 109 34 chr13 115126498 115126939 -5157373 + L1M4c LINE L1 1286 1759 -4625 2 1463 436 335 13 7 chr13 115126974 115127127 -5157185 + RSINE1 SINE B4 2 155 -10 2 1463 612 139 208 24 chr13 115127191 115127316 -5156996 - B1_Mur4 SINE Alu -1 149 2 2 1463 243 0 0 0 chr13 115127333 115127360 -5156952 + (A)n Simple_repeat Simple_repeat 1 27 0 2 1463 282 317 8 0 chr13 115127515 115127635 -5156677 + L1M4c LINE L1 2353 2473 -3903 2 1463 660 275 104 6 chr13 115127873 115128056 -5156256 + ID_B1 SINE B4 3 203 -21 2 1463 508 241 22 22 chr13 115128030 115128166 -5156146 - ORR1D1 LTR MaLR -238 136 1 2 1463 300 235 90 15 chr13 115128176 115128229 -5156083 + Lx9 LINE L1 5659 5711 -136 2 1463 279 0 0 0 chr13 115128229 115128260 -5156052 + (CA)n Simple_repeat Simple_repeat 1 31 0 2 1463 300 235 90 15 chr13 115128260 115128340 -5155972 + Lx9 LINE L1 5712 5802 -45 2 1463 235 279 25 0 chr13 115128345 115128424 -5155888 + (TA)n Simple_repeat Simple_repeat 2 82 0 2 1463 403 243 60 80 chr13 115128436 115128637 -5155675 + Lx9 LINE L1 5856 6052 -1592 2 1463 1263 198 189 31 chr13 115128662 115129022 -5155290 + MTD LTR MaLR 1 417 -2 2 1463 1002 290 155 12 chr13 115129198 115129599 -5154713 + Lx9 LINE L1 6363 6820 -824 2 1463 208 394 41 29 chr13 115129993 115130163 -5154149 + L2a LINE L2 3051 3222 -204 2 1463 216 0 0 0 chr13 115130166 115130190 -5154122 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2 1463 234 91 0 0 chr13 115132621 115132654 -5151658 + (TA)n Simple_repeat Simple_repeat 1 33 0 2 1463 1025 178 130 29 chr13 115134233 115134578 -5149734 + RMER10B LTR ERVL 1 380 -18 2 1463 23 33 0 0 chr13 115135538 115135568 -5148744 + AT_rich Low_complexity Low_complexity 1 30 0 2 1463 240 273 27 108 chr13 115135932 115136043 -5148269 - Charlie1a DNA MER1_type -13 1442 1341 2 1463 350 299 36 68 chr13 115136085 115136307 -5148005 - Charlie1a DNA MER1_type -259 1196 982 2 1463 180 217 0 0 chr13 115136330 115136376 -5147936 + (TATATG)n Simple_repeat Simple_repeat 2 47 0 2 1463 225 239 89 134 chr13 115136619 115136798 -5147514 + B4 SINE B4 120 290 -2 2 1463 800 301 167 45 chr13 115136872 115137447 -5146865 - Charlie1a DNA MER1_type -803 652 8 2 1463 249 302 38 26 chr13 115137755 115137950 -5146362 - L1MD2 LINE L1 -127 6052 5855 2 1463 474 360 12 0 chr13 115138066 115138227 -5146085 - RSINE1 SINE B4 -2 163 1 2 1463 306 320 9 14 chr13 115138303 115138432 -5145880 - L1MD2 LINE L1 -1036 5110 4985 2 1463 577 241 14 42 chr13 115138544 115138687 -5145625 - ID_B1 SINE B4 0 224 86 2 1463 221 163 0 0 chr13 115139082 115139125 -5145187 + T-rich Low_complexity Low_complexity 2 44 0 2 1463 867 147 28 0 chr13 115139127 115139270 -5145042 - B1_Mur3 SINE Alu -1 148 2 2 1463 884 84 213 0 chr13 115139960 115140115 -5144197 + B2_Mm2 SINE B2 3 190 -5 2 1463 390 375 72 5 chr13 115140372 115140581 -5143731 - L2 LINE L2 -484 2935 2713 2 1463 636 163 179 0 chr13 115140598 115140721 -5143591 + URR1A DNA MER1_type 1 145 -81 2 1463 544 271 201 16 chr13 115142326 115142510 -5141802 - ID_B1 SINE B4 0 224 7 2 1463 567 233 14 36 chr13 115142622 115142760 -5141552 - B1_Mur1 SINE Alu -2 147 13 2 1463 14229 75 30 1 chr13 115142760 115144802 -5139510 + L1_Mm LINE L1 3628 5727 -156 2 1463 392 354 165 8 chr13 115145336 115145578 -5138734 + L1M4 LINE L1 5360 5639 -545 2 1463 498 86 0 0 chr13 115145852 115145933 -5138379 + (TG)n Simple_repeat Simple_repeat 2 82 0 2 1463 199 262 112 0 chr13 115145958 115146038 -5138274 + MIRb SINE MIR 47 135 -133 2 1463 509 284 44 28 chr13 115146240 115146490 -5137822 - L1MC LINE L1 -661 5683 5430 2 1463 355 282 0 66 chr13 115146550 115146641 -5137671 - RSINE1 SINE B4 -2 163 79 2 1463 402 244 12 0 chr13 115146725 115146807 -5137505 - PB1D10 SINE Alu -14 103 21 2 1463 362 259 17 0 chr13 115146831 115146947 -5137365 - L1MC LINE L1 -869 5277 5160 2 1463 753 199 15 0 chr13 115146953 115147089 -5137223 - B1_Mur1 SINE Alu -2 147 10 2 1463 473 220 81 99 chr13 115147250 115147361 -5136951 - PB1 SINE Alu -40 109 1 2 1463 230 329 38 12 chr13 115147395 115147457 -5136855 + MLT1G1 LTR MaLR 434 497 -82 2 1463 1215 152 132 86 chr13 115147457 115147759 -5136553 + RMER6B LTR ERVK 1 316 -145 2 1463 1095 131 33 0 chr13 115147762 115147945 -5136367 + MYSERV6-int LTR ERVK 1894 2082 -6877 2 1463 1211 146 65 13 chr13 115147931 115148207 -5136105 + MYSERV6-int LTR ERVK 4444 4689 -4270 2 1463 496 184 58 0 chr13 115148285 115148388 -5135924 + MYSERV6-int LTR ERVK 4711 4819 -4140 2 1463 341 216 14 0 chr13 115148380 115148454 -5135858 + MYSERV6-int LTR ERVK 4745 4819 -4140 2 1463 341 216 14 0 chr13 115148446 115148520 -5135792 + MYSERV6-int LTR ERVK 4745 4819 -4140 2 1463 1017 121 6 23 chr13 115148512 115148689 -5135623 + MYSERV6-int LTR ERVK 4745 4918 -4041 2 1463 30 0 0 0 chr13 115148689 115148719 -5135593 + AT_rich Low_complexity Low_complexity 1 30 0 2 1463 2201 114 60 13 chr13 115148719 115149101 -5135211 + MYSERV6-int LTR ERVK 4885 5284 -3675 2 1463 268 224 138 0 chr13 115149441 115149499 -5134813 + RSINE1 SINE B4 62 127 -38 2 1463 354 23 0 0 chr13 115149519 115149562 -5134750 + (TG)n Simple_repeat Simple_repeat 2 44 0 2 1463 239 226 12 12 chr13 115149867 115149952 -5134360 + L1MC LINE L1 3039 3123 -3023 2 1463 391 273 38 0 chr13 115149963 115150069 -5134243 + B3 SINE B2 6 124 -71 2 1463 692 239 56 5 chr13 115150168 115150366 -5133946 + B3 SINE B2 1 208 -8 2 1463 493 343 58 6 chr13 115150402 115150575 -5133737 - B3A SINE B2 -8 190 9 2 1463 302 313 74 80 chr13 115150612 115150775 -5133537 + L1MC LINE L1 4001 4162 -1984 2 1463 547 161 125 0 chr13 115150778 115150890 -5133422 + B1_Mur1 SINE Alu 3 128 -21 2 1463 272 271 0 28 chr13 115150893 115150965 -5133347 + GA-rich Low_complexity Low_complexity 1 70 0 2 1463 445 278 39 34 chr13 115150983 115151188 -5133124 + L1MC LINE L1 4191 4396 -1750 2 1463 979 276 93 2 chr13 115151819 115152262 -5132050 + L1MC LINE L1 4403 4885 -1261 2 1463 180 0 0 0 chr13 115152301 115152321 -5131991 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 2 1463 609 314 102 16 chr13 115152327 115152583 -5131729 - B4A SINE B4 -9 283 6 2 1463 351 282 135 22 chr13 115152598 115152960 -5131352 + L1MC LINE L1 4965 5367 -779 2 1463 309 269 11 62 chr13 115152964 115153085 -5131227 + B1_Mur1 SINE Alu 6 143 -6 2 1463 259 138 49 49 chr13 115153116 115153177 -5131135 + L1MC LINE L1 5380 5440 -893 2 1463 402 143 48 125 chr13 115153179 115153283 -5131029 + B1_Mur1 SINE Alu 54 149 0 2 1463 322 229 160 0 chr13 115153289 115153436 -5130876 + L1MC LINE L1 5460 5627 -615 2 1463 376 273 94 0 chr13 115153527 115153655 -5130657 + B1_Mur2 SINE Alu 2 141 -8 2 1463 734 264 154 6 chr13 115153681 115153993 -5130319 + L1M3 LINE L1 5445 5802 -381 2 1463 237 359 11 0 chr13 115154333 115154425 -5129887 + ID_B1 SINE B4 81 173 -51 2 1463 382 277 10 10 chr13 115154344 115154446 -5129866 + PB1D10 SINE Alu 11 112 -5 2 1463 31 0 0 0 chr13 115155434 115155465 -5128847 + AT_rich Low_complexity Low_complexity 1 31 0 2 1463 6542 65 39 30 chr13 115155769 115155804 -5128508 - L1_Mus1 LINE L1 0 6567 6542 2 1463 287 25 25 0 chr13 115155804 115155844 -5128468 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2 1463 1066 74 0 0 chr13 115155845 115155980 -5128332 - B1_Mm SINE Alu -12 135 1 2 1463 6542 80 25 19 chr13 115155980 115157463 -5126849 - L1_Mus1 LINE L1 -26 6541 5036 2 1463 5694 101 5 3 chr13 115157463 115158359 -5125953 + L1_Mm LINE L1 3031 3927 -1956 3 1463 508 93 12 0 chr13 115158355 115158441 -5125871 + L1_Mm LINE L1 4977 5063 -820 3 1463 543 168 50 8 chr13 115158465 115158585 -5125727 + L1_Mur3 LINE L1 2512 2636 -3244 3 1463 486 0 0 0 chr13 115158585 115158639 -5125673 + (CA)n Simple_repeat Simple_repeat 1 54 0 3 1463 26 30 0 0 chr13 115158665 115158698 -5125614 + AT_rich Low_complexity Low_complexity 1 33 0 3 1463 385 312 27 0 chr13 115159032 115159144 -5125168 - B4A SINE B4 -152 140 26 3 1463 672 211 233 6 chr13 115159294 115159470 -5124842 - B3 SINE B2 0 216 1 3 1463 356 205 23 93 chr13 115160216 115160302 -5124010 + 4.5SRNA scRNA scRNA 1 80 -14 3 1463 447 168 137 0 chr13 115160259 115160354 -5123958 + B1_Mur3 SINE Alu 41 148 -1 3 1463 1514 243 17 19 chr13 115160341 115160702 -5123610 + MTD LTR MaLR 60 419 0 3 1463 328 296 102 16 chr13 115161206 115161333 -5122979 + MLT1I LTR MaLR 6 143 -268 3 1463 271 377 8 58 chr13 115161403 115161524 -5122788 + MLT1I LTR MaLR 259 373 -38 3 1463 25 31 0 0 chr13 115162165 115162197 -5122115 + AT_rich Low_complexity Low_complexity 1 32 0 3 1463 198 266 62 0 chr13 115162232 115162296 -5122016 - L2c LINE L2 -74 3313 3246 3 1463 297 155 0 0 chr13 115162472 115162530 -5121782 + (TA)n Simple_repeat Simple_repeat 2 59 0 3 1463 440 346 37 0 chr13 115162926 115163062 -5121250 + B1F SINE Alu 3 143 -6 3 1463 468 254 117 52 chr13 115163290 115163444 -5120868 + RSINE1 SINE B4 2 165 0 3 1463 2553 148 104 38 chr13 115163666 115164194 -5120118 + RMER6C LTR ERVK 1 563 -127 3 1463 242 229 40 54 chr13 115164226 115164300 -5120012 + ID4 SINE ID 2 74 -9 3 1463 227 220 34 0 chr13 115164307 115164366 -5119946 + GA-rich Low_complexity Low_complexity 2 62 0 3 1463 544 284 47 6 chr13 115164390 115164560 -5119752 - MLT1D LTR MaLR -2 503 327 3 1463 394 291 126 50 chr13 115164594 115164793 -5119519 - MLT1D LTR MaLR -290 215 2 3 1463 467 252 17 76 chr13 115164830 115165002 -5119310 - RSINE1 SINE B4 -1 164 3 3 1463 401 287 8 47 chr13 115165120 115165248 -5119064 + B4 SINE B4 1 123 -169 3 1463 197 33 33 0 chr13 115165630 115165660 -5118652 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 3 1463 501 233 8 8 chr13 115165675 115165792 -5118520 + PB1D9 SINE Alu 1 117 -3 3 1463 300 356 9 37 chr13 115165916 115166024 -5118288 + RSINE1 SINE B4 44 148 -17 3 1463 289 292 0 14 chr13 115166072 115166145 -5118167 + B4A SINE B4 74 145 -147 3 1463 338 14 99 0 chr13 115166177 115166248 -5118064 + (GA)n Simple_repeat Simple_repeat 1 78 0 3 1463 313 164 0 35 chr13 115166276 115166333 -5117979 + B3A SINE B2 71 125 -73 3 1463 592 175 8 8 chr13 115166589 115166716 -5117596 + GA-rich Low_complexity Low_complexity 1 127 0 3 1463 365 395 107 33 chr13 115166820 115167184 -5117128 + L1MD2 LINE L1 302 692 -5855 3 1463 1966 138 75 18 chr13 115167740 115167884 -5116428 - MTC LTR MaLR -11 410 251 3 1463 438 20 0 0 chr13 115167884 115167935 -5116377 + (TGGGGG)n Simple_repeat Simple_repeat 2 52 0 3 1463 1966 138 75 18 chr13 115167935 115168175 -5116137 - MTC LTR MaLR -171 250 4 3 1463 833 234 69 5 chr13 115168244 115168446 -5115866 + B3 SINE B2 1 215 -1 3 1463 299 130 0 18 chr13 115168543 115168582 -5115730 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 3 1463 1053 150 0 0 chr13 115168582 115168762 -5115550 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 1463 299 130 0 18 chr13 115168762 115168777 -5115535 + (GGGA)n Simple_repeat Simple_repeat 3 17 0 3 1463 237 335 82 75 chr13 115168881 115169136 -5115176 - ORR1E LTR MaLR -5 354 98 3 1463 226 336 16 81 chr13 115169501 115169624 -5114688 + ORR1D2 LTR MaLR 1 115 -255 3 1463 804 115 0 0 chr13 115171363 115171485 -5112827 + (GGA)n Simple_repeat Simple_repeat 2 123 0 3 1463 361 255 65 19 chr13 115171639 115171747 -5112565 - RSINE1 SINE B4 0 165 53 3 1463 673 253 7 7 chr13 115172398 115172549 -5111763 + B3 SINE B2 15 165 -51 3 1463 421 92 13 13 chr13 115172549 115172626 -5111686 + (CA)n Simple_repeat Simple_repeat 2 78 0 3 1463 258 234 50 60 chr13 115173237 115173337 -5110975 + Lx5 LINE L1 6561 6659 -391 3 1463 8176 31 5 1 chr13 115173402 115174950 -5109362 - L1Md_F2 LINE L1 -12 6570 5020 3 1463 1222 61 0 0 chr13 115175940 115176088 -5108224 + B1_Mus1 SINE Alu 1 148 0 3 1463 189 0 0 0 chr13 115176155 115176176 -5108136 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1463 387 186 0 0 chr13 115176660 115176762 -5107550 + (TA)n Simple_repeat Simple_repeat 1 102 0 3 1463 390 284 15 7 chr13 115176800 115176935 -5107377 - ID_B1 SINE B4 -88 136 1 3 1463 520 175 0 84 chr13 115177147 115177278 -5107034 - PB1D9 SINE Alu 0 120 1 3 1463 246 62 0 0 chr13 115177278 115177310 -5107002 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1463 234 128 64 0 chr13 115177539 115177586 -5106726 + B1_Mur2 SINE Alu 99 148 -1 3 1463 198 103 0 0 chr13 115178776 115178805 -5105507 + (GAAA)n Simple_repeat Simple_repeat 2 30 0 3 1463 304 103 0 134 chr13 115178832 115178899 -5105413 + ID SINE ID 1 58 -166 3 1463 259 203 0 51 chr13 115178899 115178910 -5105402 + BC1_Mm scRNA scRNA 1 74 -78 3 1463 180 0 0 0 chr13 115179176 115179196 -5105116 + (TTTTC)n Simple_repeat Simple_repeat 2 21 0 3 1463 305 250 0 35 chr13 115179267 115179354 -5104958 - PB1D10 SINE Alu -1 116 33 3 1463 423 234 193 21 chr13 115179501 115179641 -5104671 - RSINE1 SINE B4 0 165 2 3 1463 228 386 9 0 chr13 115179661 115179775 -5104537 + L2a LINE L2 2616 2730 -689 3 1463 183 395 13 0 chr13 115180076 115180152 -5104160 + L2a LINE L2 3002 3078 -348 3 1463 662 193 225 11 chr13 115180441 115180619 -5103693 - B3 SINE B2 0 216 1 3 1463 367 169 0 33 chr13 115181280 115181372 -5102940 + GA-rich Low_complexity Low_complexity 2 90 0 3 1463 227 322 43 17 chr13 115181479 115181596 -5102716 + MLT1L LTR MaLR 419 538 -72 3 1463 403 202 6 0 chr13 115181904 115181991 -5102321 - PB1D10 SINE Alu -14 103 17 3 1463 427 235 41 65 chr13 115182044 115182167 -5102145 + PB1D9 SINE Alu 1 120 0 3 1463 845 166 12 0 chr13 115183398 115183561 -5100751 + GA-rich Low_complexity Low_complexity 4 168 0 3 1463 1201 40 6 34 chr13 115183886 115184619 -5099693 + (TG)n Simple_repeat Simple_repeat 1 712 0 3 1463 393 348 42 14 chr13 115184628 115184771 -5099541 - RSINE1 SINE B4 -17 148 2 3 1463 696 275 0 23 chr13 115184771 115184937 -5099375 - ID_B1 SINE B4 -25 199 38 3 1463 222 325 71 0 chr13 115185200 115185326 -5098986 + L2a LINE L2 1158 1292 -2127 3 1463 1912 103 9 78 chr13 115185500 115185848 -5098464 - ORR1A4 LTR MaLR -5 324 1 3 1463 402 255 135 77 chr13 115185853 115186023 -5098289 - B3A SINE B2 -16 182 3 3 1463 249 33 0 0 chr13 115186342 115186372 -5097940 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 3 1463 1332 86 11 0 chr13 115186385 115186560 -5097752 + B2_Mm1t SINE B2 3 179 -14 3 1463 317 127 0 40 chr13 115186616 115186684 -5097628 + B2_Mm2 SINE B2 47 110 -106 3 1463 297 0 0 0 chr13 115186724 115186757 -5097555 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 3 1463 419 329 135 53 chr13 115187123 115187928 -5096384 + L2a LINE L2 1391 2261 -1158 3 1463 879 177 140 0 chr13 115188151 115188337 -5095975 - B3 SINE B2 0 216 5 3 1463 662 193 83 62 chr13 115188362 115188555 -5095757 - B3A SINE B2 -1 197 1 3 1463 181 235 0 0 chr13 115188875 115188909 -5095403 - L2b LINE L2 -12 3363 3330 3 1463 203 398 55 0 chr13 115188950 115189078 -5095234 - MIRb SINE MIR -114 154 20 3 1463 1717 156 54 34 chr13 115189229 115189581 -5094731 + ORR1B2 LTR MaLR 1 359 -8 3 1463 1329 245 115 23 chr13 115189674 115190058 -5094254 + MTC LTR MaLR 1 419 -2 3 1463 225 250 40 27 chr13 115190058 115190132 -5094180 + MTD LTR MaLR 330 404 -15 3 1463 463 283 0 35 chr13 115190298 115190441 -5093871 - ID_B1 SINE B4 0 224 87 3 1463 205 235 56 45 chr13 115190444 115190533 -5093779 + L2a LINE L2 2762 2851 -568 3 1463 235 213 153 41 chr13 115190650 115190748 -5093564 + L2a LINE L2 3053 3161 -265 3 1463 400 279 14 21 chr13 115190751 115190894 -5093418 - LTR33A LTR ERVL 0 520 379 3 1463 495 313 138 22 chr13 115191226 115191458 -5092854 - ORR1D2 LTR MaLR -111 259 1 3 1463 919 113 0 14 chr13 115191588 115191731 -5092581 + B1_Mus1 SINE Alu 6 146 -2 3 1463 262 96 96 0 chr13 115191717 115191769 -5092543 - U2 snRNA snRNA -131 57 1 3 1463 261 0 0 0 chr13 115192500 115192529 -5091783 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 3 1463 553 251 34 51 chr13 115193697 115193905 -5090407 + B3A SINE B2 15 216 0 3 1463 626 165 97 24 chr13 115194270 115194394 -5089918 + B1_Mur2 SINE Alu 2 134 -15 3 1463 423 0 0 0 chr13 115194394 115194441 -5089871 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1463 1172 61 7 0 chr13 115194901 115195048 -5089264 + B1_Mus1 SINE Alu 1 148 0 3 1463 865 238 44 0 chr13 115195159 115195365 -5088947 - B3 SINE B2 0 216 2 3 1463 494 340 54 42 chr13 115195525 115195786 -5088526 - MLT1J2 LTR MaLR -148 300 37 3 1463 405 0 0 0 chr13 115198339 115198384 -5085928 + (TG)n Simple_repeat Simple_repeat 2 46 0 3 1463 471 87 0 0 chr13 115198754 115198823 -5085489 + (CA)n Simple_repeat Simple_repeat 2 70 0 3 1463 675 156 0 0 chr13 115199191 115199313 -5084999 + (TG)n Simple_repeat Simple_repeat 2 123 0 3 1463 820 213 0 0 chr13 115199893 115200043 -5084269 + B1_Mur4 SINE Alu 1 150 0 3 1463 189 0 0 0 chr13 115200805 115200826 -5083486 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 3 1463 255 243 13 26 chr13 115202132 115202208 -5082104 - ID4 SINE ID -6 77 3 3 1463 387 0 0 0 chr13 115202293 115202336 -5081976 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 3 1463 729 295 104 67 chr13 115202416 115202895 -5081417 + MLT1D LTR MaLR 9 505 0 3 1463 3548 155 3 58 chr13 115203026 115203683 -5080629 - Lx LINE L1 0 6654 6034 4 1463 7047 62 9 8 chr13 115203684 115205317 -5078995 - L1VL4 LINE L1 -1792 1767 135 4 1463 935 40 8 0 chr13 115205342 115205466 -5078846 + (TC)n Simple_repeat Simple_repeat 2 126 0 4 1463 308 127 0 18 chr13 115205467 115205523 -5078789 + (TATG)n Simple_repeat Simple_repeat 2 56 0 4 1463 1169 62 0 7 chr13 115206068 115206215 -5078097 + B1_Mus2 SINE Alu 1 146 -1 4 1463 244 281 88 54 chr13 115207151 115207298 -5077014 - LTR33 LTR ERVL -8 507 356 4 1463 843 165 30 9 chr13 115207392 115207628 -5076684 + CT-rich Low_complexity Low_complexity 1 241 0 4 1463 705 318 5 32 chr13 115207637 115207699 -5076613 - ID_B1 SINE B4 -2 222 165 4 1463 1707 156 264 0 chr13 115207699 115208032 -5076280 - MTC LTR MaLR 0 421 1 4 1463 705 318 5 32 chr13 115208032 115208190 -5076122 - ID_B1 SINE B4 -60 164 8 4 1463 337 287 40 0 chr13 115208477 115208578 -5075734 + B1F SINE Alu 44 148 -1 4 1463 585 0 0 0 chr13 115208640 115208705 -5075607 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 4 1463 513 190 50 0 chr13 115208834 115208934 -5075378 + B1F2 SINE Alu 13 117 -32 4 1463 30 0 0 0 chr13 115208951 115208981 -5075331 + AT_rich Low_complexity Low_complexity 1 30 0 4 1463 829 151 14 14 chr13 115209227 115209375 -5074937 + B1_Mur3 SINE Alu 2 149 0 4 1463 320 309 70 16 chr13 115209668 115209796 -5074516 + L1M5 LINE L1 5512 5646 -478 4 1463 204 40 0 0 chr13 115210250 115210275 -5074037 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 4 1463 240 59 0 0 chr13 115210275 115210309 -5074003 + (TG)n Simple_repeat Simple_repeat 2 35 0 4 1463 414 282 136 0 chr13 115210310 115210420 -5073892 - RSINE1 SINE B4 -25 140 16 4 1463 854 166 21 0 chr13 115211312 115211457 -5072855 - B1_Mur4 SINE Alu 0 150 3 4 1463 258 304 141 7 chr13 115211585 115211734 -5072578 - MER33 DNA MER1_type -154 170 2 4 1464 195 225 0 0 chr13 115212591 115212662 -5071650 + (CA)n Simple_repeat Simple_repeat 2 72 0 4 1464 474 216 17 0 chr13 115212679 115212855 -5071457 + (CA)n Simple_repeat Simple_repeat 2 180 0 4 1464 300 263 26 0 chr13 115213130 115213206 -5071106 + ID SINE ID 1 78 -146 4 1464 801 103 16 2 chr13 115213962 115214100 -5070212 - B1_Mus1 SINE Alu -4 144 6 4 1464 421 255 19 39 chr13 115213964 115214119 -5070193 - ID_B1 SINE B4 -6 218 67 4 1464 1028 186 22 58 chr13 115214322 115214545 -5069767 + B3 SINE B2 2 216 0 4 1464 215 303 53 0 chr13 115215006 115215082 -5069230 + RSINE1 SINE B4 75 154 -11 4 1464 687 278 74 84 chr13 115215243 115215537 -5068775 + L1M3 LINE L1 2983 3284 -2856 4 1464 261 0 0 0 chr13 115215537 115215566 -5068746 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4 1464 687 278 74 84 chr13 115215566 115215797 -5068515 + L1M3 LINE L1 3285 3503 -2637 4 1464 738 34 0 0 chr13 115215868 115215957 -5068355 + (TCCC)n Simple_repeat Simple_repeat 1 89 0 4 1464 216 185 0 0 chr13 115215959 115216013 -5068299 + CT-rich Low_complexity Low_complexity 2 55 0 4 1464 210 191 0 0 chr13 115216012 115216059 -5068253 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1464 536 72 12 0 chr13 115216241 115216324 -5067988 + ORR1A2 LTR MaLR 1 84 -243 4 1464 402 231 98 150 chr13 115216786 115216959 -5067353 + ORR1A2 LTR MaLR 204 367 -12 4 1464 348 312 47 16 chr13 115216965 115217092 -5067220 + MLT1A1 LTR MaLR 139 269 -139 4 1464 203 61 0 29 chr13 115217125 115217159 -5067153 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 4 1464 252 0 0 0 chr13 115217197 115217225 -5067087 + (TG)n Simple_repeat Simple_repeat 2 29 0 4 1464 546 313 13 0 chr13 115217232 115217382 -5066930 - RSINE1 SINE B4 -12 153 2 4 1464 343 292 11 22 chr13 115217606 115217697 -5066615 - RSINE1 SINE B4 0 165 76 4 1464 1335 72 0 0 chr13 115217854 115218034 -5066278 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 4 1464 253 127 36 18 chr13 115218034 115218084 -5066228 + CT-rich Low_complexity Low_complexity 9 60 0 4 1464 1177 89 0 16 chr13 115218084 115218267 -5066045 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 4 1464 220 340 160 0 chr13 115218278 115218378 -5065934 - L2a LINE L2 -17 3409 3294 4 1464 347 0 23 0 chr13 115218397 115218440 -5065872 + (TGAA)n Simple_repeat Simple_repeat 2 45 0 4 1464 556 265 66 7 chr13 115218474 115218626 -5065686 - ID_B1 SINE B4 -9 215 55 4 1464 7579 68 22 3 chr13 115218722 115220278 -5064034 - L1_Mus1 LINE L1 0 6567 4981 4 1464 568 329 0 30 chr13 115220663 115220829 -5063483 + RSINE1 SINE B4 3 163 -2 4 1464 801 176 0 34 chr13 115221008 115221155 -5063157 - B1_Mur3 SINE Alu -5 144 3 4 1464 425 241 0 164 chr13 115222823 115222982 -5061330 - B1F1 SINE Alu -12 137 5 4 1464 358 322 77 0 chr13 115222993 115223201 -5061111 - L1MA5 LINE L1 0 6300 6077 4 1464 325 320 114 22 chr13 115223604 115223831 -5060481 - MLT1A LTR MaLR -2 372 125 4 1464 294 261 0 0 chr13 115223842 115223907 -5060405 + B3 SINE B2 7 71 -145 4 1464 360 0 0 0 chr13 115223920 115223960 -5060352 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1464 235 319 124 49 chr13 115224099 115224366 -5059946 + MLT1E3 LTR MaLR 36 322 -302 4 1464 479 209 38 0 chr13 115224422 115224527 -5059785 - B1_Mus2 SINE Alu -3 144 36 4 1464 653 296 75 5 chr13 115224592 115224972 -5059340 + RCHARR1 DNA MER1_type 5 434 -540 4 1464 696 217 84 9 chr13 115225177 115225251 -5059061 + RCHARR1 DNA MER1_type 439 519 -455 4 1464 258 32 0 0 chr13 115225251 115225282 -5059030 + (CA)n Simple_repeat Simple_repeat 2 32 0 4 1464 696 224 234 4 chr13 115225282 115225575 -5058737 + RCHARR1 DNA MER1_type 520 877 -97 4 1464 2359 178 93 28 chr13 115225754 115226250 -5058062 + RLTR11A LTR ERVK 1 528 0 4 1464 235 85 0 41 chr13 115226437 115226486 -5057826 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 4 1464 345 47 0 0 chr13 115227232 115227275 -5057037 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 4 1464 662 190 0 107 chr13 115227292 115227451 -5056861 - B1_Mur1 SINE Alu -6 143 2 4 1464 1042 236 107 36 chr13 115227472 115227885 -5056427 - L1M2 LINE L1 -526 5774 5333 4 1464 189 0 0 0 chr13 115227895 115227916 -5056396 + (TTC)n Simple_repeat Simple_repeat 2 22 0 4 1464 349 267 82 25 chr13 115228534 115228730 -5055582 - L1M2 LINE L1 -957 5186 4980 4 1464 424 350 0 0 chr13 115228733 115228870 -5055442 - B1_Mur1 SINE Alu -5 144 8 4 1464 1163 282 89 35 chr13 115228876 115229487 -5054825 - L1M2 LINE L1 -1158 4985 4329 4 1464 207 100 0 0 chr13 115229515 115229545 -5054767 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 4 1464 528 318 89 5 chr13 115229546 115229748 -5054564 - ID_B1 SINE B4 -1 223 5 4 1464 282 178 40 27 chr13 115230120 115230195 -5054117 - RLTR16 LTR ERVK 0 505 430 4 1464 2251 159 42 29 chr13 115230216 115230262 -5054050 - RLTR16 LTR ERVK -45 460 415 4 1464 369 0 0 0 chr13 115230262 115230303 -5054009 + (CA)n Simple_repeat Simple_repeat 2 42 0 4 1464 2251 159 42 29 chr13 115230303 115230710 -5053602 - RLTR16 LTR ERVK -91 414 2 4 1464 231 410 35 35 chr13 115230710 115230845 -5053467 - LTR33A_ LTR ERVL -366 165 31 4 1464 28 61 0 0 chr13 115231650 115231699 -5052613 + AT_rich Low_complexity Low_complexity 1 49 0 4 1464 198 71 0 0 chr13 115231699 115231727 -5052585 + (TG)n Simple_repeat Simple_repeat 1 28 0 4 1464 571 286 39 13 chr13 115231739 115231895 -5052417 - B3A SINE B2 -38 160 1 4 1464 236 311 75 37 chr13 115231973 115231984 -5052328 + MT2B LTR ERVL 147 161 -440 4 1464 420 245 82 0 chr13 115231984 115232082 -5052230 + B1_Mur1 SINE Alu 1 106 -43 4 1464 294 29 0 0 chr13 115232103 115232138 -5052174 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 4 1464 368 294 10 0 chr13 115233155 115233257 -5051055 - PB1D7 SINE Alu 0 120 18 4 1464 577 277 81 27 chr13 115233582 115233842 -5050470 - B4A SINE B4 -17 275 2 4 1464 441 0 0 0 chr13 115234931 115234980 -5049332 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1464 468 0 0 0 chr13 115235081 115235133 -5049179 + (CA)n Simple_repeat Simple_repeat 2 53 0 4 1464 937 165 122 61 chr13 115235907 115236120 -5048192 + URR1A DNA MER1_type 1 226 0 4 1464 25 0 0 0 chr13 115236232 115236257 -5048055 + AT_rich Low_complexity Low_complexity 1 25 0 4 1464 21 57 0 0 chr13 115236500 115236535 -5047777 + AT_rich Low_complexity Low_complexity 1 35 0 4 1464 331 280 21 11 chr13 115237572 115237666 -5046646 + LTR88b LTR Gypsy? 7 101 -736 4 1464 23 0 0 0 chr13 115238022 115238045 -5046267 + AT_rich Low_complexity Low_complexity 1 23 0 4 1464 341 309 45 24 chr13 115238300 115238482 -5045830 - MIRb SINE MIR -15 253 71 4 1464 189 0 0 0 chr13 115238629 115238650 -5045662 + (T)n Simple_repeat Simple_repeat 1 21 0 4 1464 650 199 67 13 chr13 115238696 115238884 -5045428 - B3 SINE B2 0 195 2 4 1464 308 293 44 51 chr13 115238958 115239116 -5045196 - RSINE1 SINE B4 -4 161 5 4 1464 23 33 0 0 chr13 115239838 115239868 -5044444 + AT_rich Low_complexity Low_complexity 1 30 0 4 1464 750 263 0 40 chr13 115241103 115241305 -5043007 - B3A SINE B2 -1 197 4 4 1464 641 159 0 0 chr13 115241553 115241660 -5042652 + B3 SINE B2 2 108 -108 4 1464 620 224 175 22 chr13 115241693 115241876 -5042436 - B3 SINE B2 -5 211 1 4 1464 776 235 5 53 chr13 115241904 115242111 -5042201 - B3A SINE B2 0 198 2 4 1464 971 102 58 68 chr13 115242119 115242309 -5042003 - B2_Mm2 SINE B2 -7 188 1 4 1464 271 274 0 0 chr13 115243507 115243591 -5040721 + T-rich Low_complexity Low_complexity 1 84 0 4 1464 206 205 0 0 chr13 115243667 115243706 -5040606 + CT-rich Low_complexity Low_complexity 1 39 0 4 1464 249 57 0 0 chr13 115243851 115243886 -5040426 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4 1464 333 68 0 0 chr13 115244790 115244834 -5039478 + (TCCA)n Simple_repeat Simple_repeat 4 47 0 4 1464 180 111 0 0 chr13 115245560 115245587 -5038725 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 4 1464 632 115 0 9 chr13 115246906 115247011 -5037301 + (GA)n Simple_repeat Simple_repeat 1 104 0 4 1464 226 206 14 68 chr13 115247302 115247375 -5036937 + G-rich Low_complexity Low_complexity 5 73 0 4 1464 245 177 15 46 chr13 115249194 115249259 -5035053 + G-rich Low_complexity Low_complexity 3 65 0 4 1464 210 171 0 0 chr13 115249323 115249364 -5034948 + (TG)n Simple_repeat Simple_repeat 1 41 0 5 1464 234 0 0 0 chr13 115249926 115249952 -5034360 + (TC)n Simple_repeat Simple_repeat 2 27 0 5 1464 216 324 0 0 chr13 115250309 115250377 -5033935 + C-rich Low_complexity Low_complexity 1 68 0 5 1464 333 335 6 25 chr13 115250833 115250992 -5033320 + C-rich Low_complexity Low_complexity 3 158 0 5 1464 298 85 53 78 chr13 115251679 115251755 -5032557 - B3A SINE B2 -112 83 23 5 1464 2482 154 97 19 chr13 115251822 115252350 -5031962 + RMER15 LTR ERVL 2 570 -5 5 1464 517 218 78 31 chr13 115252767 115252895 -5031417 - ID_B1 SINE B4 0 224 91 5 1464 22 0 0 0 chr13 115253524 115253546 -5030766 + AT_rich Low_complexity Low_complexity 1 22 0 5 1464 555 16 0 0 chr13 115254297 115254361 -5029951 + (TG)n Simple_repeat Simple_repeat 2 65 0 5 1464 1227 79 6 33 chr13 115254794 115254816 -5029496 - B2_Mm1a SINE B2 -15 178 161 5 1464 231 36 0 0 chr13 115254816 115254844 -5029468 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 5 1464 1227 79 6 33 chr13 115254844 115255004 -5029308 - B2_Mm1a SINE B2 -33 160 1 5 1464 454 323 159 17 chr13 115255354 115255587 -5028725 + MLT1A1 LTR MaLR 56 320 -88 5 1464 180 0 0 0 chr13 115255587 115255607 -5028705 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 5 1464 454 323 159 17 chr13 115255607 115255663 -5028649 + MLT1A1 LTR MaLR 321 385 -23 5 1464 378 298 63 62 chr13 115255728 115256095 -5028217 - L1M5 LINE L1 -1267 4879 4502 5 1464 216 0 0 0 chr13 115256200 115256224 -5028088 + (TG)n Simple_repeat Simple_repeat 1 24 0 5 1464 351 0 0 0 chr13 115256224 115256262 -5028050 + (GA)n Simple_repeat Simple_repeat 1 39 0 5 1464 274 157 59 0 chr13 115257295 115257346 -5026966 - LSU-rRNA_Hsa rRNA rRNA -3271 1764 1711 5 1464 433 275 9 38 chr13 115258083 115258189 -5026123 - RSINE1 SINE B4 -30 135 33 5 1464 629 193 52 7 chr13 115258271 115258407 -5025905 - B1_Mur4 SINE Alu 0 150 9 5 1464 323 262 44 61 chr13 115258310 115258424 -5025888 - B4A SINE B4 -99 193 82 5 1464 763 215 0 14 chr13 115258427 115258780 -5025532 + CT-rich Low_complexity Low_complexity 1 347 0 5 1464 1500 82 0 5 chr13 115259010 115259206 -5025106 - B2_Mm2 SINE B2 0 195 1 5 1464 2280 136 95 81 chr13 115260307 115260804 -5023508 - RMER15 LTR ERVL 0 575 72 5 1464 562 227 85 20 chr13 115260838 115260991 -5023321 + RSINE1 SINE B4 3 165 0 5 1464 2235 204 7 138 chr13 115261458 115262159 -5022153 - RMER19C LTR ERVK -2 609 1 5 1464 945 129 6 12 chr13 115262180 115262353 -5021959 + (TCC)n Simple_repeat Simple_repeat 2 173 0 5 1464 1140 124 0 0 chr13 115262354 115262532 -5021780 + (TTC)n Simple_repeat Simple_repeat 2 179 0 5 1464 2250 111 83 8 chr13 115262536 115262898 -5021414 - Lx LINE L1 -2 6652 6264 5 1464 1439 80 5 0 chr13 115263367 115263555 -5020757 - B2_Mm1a SINE B2 -4 189 1 5 1464 347 300 12 0 chr13 115263771 115263851 -5020461 - RSINE1 SINE B4 -73 92 12 5 1464 309 51 0 0 chr13 115263872 115263911 -5020401 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 5 1464 719 251 119 85 chr13 115263911 115264289 -5020023 - L1M4 LINE L1 -362 5822 5432 5 1464 252 209 75 0 chr13 115265103 115265170 -5019142 - L1ME4a LINE L1 -1 6123 6052 5 1464 1049 243 5 9 chr13 115265734 115265946 -5018366 + B3 SINE B2 1 211 -5 5 1464 3236 60 0 2 chr13 115266039 115266440 -5017872 + MTB LTR MaLR 1 400 0 5 1464 716 192 28 21 chr13 115267644 115267832 -5016480 + B3 SINE B2 3 188 -7 5 1464 901 95 7 7 chr13 115269265 115269403 -5014909 - L1_Mus1 LINE L1 0 6567 6430 5 1464 2785 146 70 9 chr13 115270129 115270656 -5013656 + RMER15 LTR ERVL 17 575 0 5 1464 1419 225 221 5 chr13 115270809 115271247 -5013065 + MT2A LTR ERVL 1 533 0 5 1464 21 0 0 0 chr13 115271613 115271634 -5012678 + AT_rich Low_complexity Low_complexity 1 21 0 5 1464 396 0 0 0 chr13 115272187 115272231 -5012081 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 5 1464 420 330 26 23 chr13 115272415 115272620 -5011692 + MTE2a LTR MaLR 14 213 -206 5 1464 1248 87 0 6 chr13 115272622 115273531 -5010781 + (CAG)n Simple_repeat Simple_repeat 1 904 0 5 1464 432 0 0 0 chr13 115273642 115273690 -5010622 + (CAA)n Simple_repeat Simple_repeat 2 49 0 5 1464 746 177 200 28 chr13 115273784 115273964 -5010348 - B3 SINE B2 -1 215 5 5 1464 30 27 0 0 chr13 115273971 115274008 -5010304 + AT_rich Low_complexity Low_complexity 1 37 0 5 1464 422 276 19 9 chr13 115274043 115274149 -5010163 - RSINE1 SINE B4 -57 108 2 5 1464 231 194 153 0 chr13 115274151 115274223 -5010089 - L1MC4 LINE L1 -25 8017 7908 5 1464 429 66 0 0 chr13 115274406 115274467 -5009845 + (TATG)n Simple_repeat Simple_repeat 2 62 0 5 1464 272 91 23 0 chr13 115274471 115274515 -5009797 + (TCTG)n Simple_repeat Simple_repeat 3 47 0 5 1464 709 219 0 0 chr13 115274523 115274660 -5009652 - B1_Mur1 SINE Alu -5 144 8 5 1464 426 292 0 45 chr13 115274660 115274672 -5009640 - ID_B1 SINE B4 0 219 78 5 1464 212 220 0 33 chr13 115274673 115274734 -5009578 - B1F SINE Alu 0 149 91 5 1464 383 163 114 23 chr13 115274726 115274814 -5009498 - B1_Mur2 SINE Alu -22 127 32 5 1464 307 262 130 9 chr13 115274742 115274850 -5009462 - B4 SINE B4 -97 195 75 5 1464 516 16 0 0 chr13 115274902 115274963 -5009349 + (TATG)n Simple_repeat Simple_repeat 2 62 0 5 1464 197 288 112 28 chr13 115275616 115275759 -5008553 + L2a LINE L2 3269 3423 -3 5 1464 297 0 0 0 chr13 115275765 115275798 -5008514 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 5 1464 834 144 181 6 chr13 115276029 115276211 -5008101 + URR1B DNA MER1_type 2 215 -10 5 1464 548 130 43 0 chr13 115276337 115276429 -5007883 - B1_Mur1 SINE Alu -1 148 53 5 1464 548 275 81 6 chr13 115276722 115276883 -5007429 + ID_B1 SINE B4 2 174 -50 5 1464 246 316 19 48 chr13 115276795 115276898 -5007414 + PB1D10 SINE Alu 6 105 -12 5 1464 186 128 0 0 chr13 115279247 115279286 -5005026 + (T)n Simple_repeat Simple_repeat 1 39 0 5 1464 180 152 0 0 chr13 115279943 115279976 -5004336 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 5 1464 224 132 0 0 chr13 115282369 115282407 -5001905 - L2a LINE L2 -8 3418 3381 5 1464 253 363 100 17 chr13 115283009 115283239 -5001073 - Lx8 LINE L1 -244 7229 6981 5 1464 627 259 14 14 chr13 115283632 115283777 -5000535 + B1_Mus2 SINE Alu 1 145 -2 5 1464 207 227 0 0 chr13 115284339 115284383 -4999929 + L2a LINE L2 3347 3390 -36 5 1464 362 74 19 0 chr13 115284397 115284451 -4999861 + (TG)n Simple_repeat Simple_repeat 2 56 0 5 1464 638 265 176 21 chr13 115284512 115284751 -4999561 - B4A SINE B4 -14 278 3 5 1464 1118 317 141 26 chr13 115285058 115285171 -4999141 - Lx8 LINE L1 -2 7471 7357 5 1464 390 21 0 0 chr13 115285171 115285218 -4999094 + (TTTTA)n Simple_repeat Simple_repeat 3 49 0 5 1464 1118 317 141 26 chr13 115285218 115285438 -4998874 - Lx8 LINE L1 -117 7356 7074 5 1464 1447 229 102 8 chr13 115285438 115285469 -4998843 - MTD LTR MaLR 0 419 382 5 1464 234 0 0 0 chr13 115285469 115285495 -4998817 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 5 1464 1447 229 102 8 chr13 115285495 115285845 -4998467 - MTD LTR MaLR -38 381 3 5 1464 1118 317 141 26 chr13 115285845 115286165 -4998147 - Lx8 LINE L1 -400 7073 6744 5 1464 550 315 108 25 chr13 115286301 115286578 -4997734 + Lx8 LINE L1 6101 6400 -1073 5 1464 1094 72 13 0 chr13 115286777 115286929 -4997383 + L1_Mus2 LINE L1 6409 6562 -4 5 1464 1801 138 27 33 chr13 115286953 115287282 -4997030 + Lx3B LINE L1 6646 6972 -1 5 1464 999 315 24 12 chr13 115287310 115287485 -4996827 + Lx8 LINE L1 6119 6290 -1183 5 1464 402 85 0 0 chr13 115287485 115287544 -4996768 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 5 1464 999 315 24 12 chr13 115287544 115287705 -4996607 + Lx8 LINE L1 6291 6458 -1015 5 1464 1744 319 64 13 chr13 115287715 115288467 -4995845 + Lx8 LINE L1 6624 7413 -60 5 1464 387 171 0 0 chr13 115288467 115288543 -4995769 + GA-rich Low_complexity Low_complexity 1 76 0 5 1464 298 243 57 19 chr13 115288580 115288685 -4995627 + RMER1C Other Other 1230 1338 -4 5 1464 376 208 59 0 chr13 115288680 115288781 -4995531 + Lx9 LINE L1 7534 7640 -4 5 1464 1429 39 78 0 chr13 115289015 115289033 -4995279 - B2_Mm1a SINE B2 0 193 176 5 1464 243 0 0 0 chr13 115289033 115289060 -4995252 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 5 1464 1429 39 78 0 chr13 115289060 115289220 -4995092 - B2_Mm1a SINE B2 -18 175 2 5 1464 242 73 0 24 chr13 115289275 115289317 -4994995 + (CAA)n Simple_repeat Simple_repeat 2 42 0 5 1464 531 0 0 0 chr13 115289373 115289432 -4994880 + (CA)n Simple_repeat Simple_repeat 2 60 0 5 1464 552 274 17 59 chr13 115289460 115289697 -4994615 + Lx8 LINE L1 7247 7473 0 5 1464 323 263 30 0 chr13 115289708 115289807 -4994505 + Lx8 LINE L1 6385 6486 -987 5 1464 603 0 0 0 chr13 115289809 115289876 -4994436 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 5 1464 971 88 14 0 chr13 115289887 115290035 -4994277 - B2_Mm2 SINE B2 -45 150 1 5 1464 790 296 115 4 chr13 115290036 115290297 -4994015 + Lx8 LINE L1 6471 6760 -713 5 1464 469 292 26 0 chr13 115290818 115290931 -4993381 + B3A SINE B2 35 150 -48 5 1464 284 208 29 10 chr13 115290981 115291083 -4993229 + (CATATA)n Simple_repeat Simple_repeat 4 107 0 5 1464 1349 158 0 26 chr13 115292093 115292320 -4991992 + URR1B DNA MER1_type 2 222 -3 5 1464 189 179 75 0 chr13 115294987 115295054 -4989258 + GA-rich Low_complexity Low_complexity 4 75 0 5 1464 774 236 25 50 chr13 115295289 115295490 -4988822 + MTEa LTR MaLR 1 196 -183 5 1464 225 94 0 0 chr13 115295628 115295660 -4988652 + (T)n Simple_repeat Simple_repeat 1 32 0 5 1464 321 350 0 0 chr13 115295762 115295862 -4988450 + CT-rich Low_complexity Low_complexity 22 121 0 5 1464 1055 97 6 17 chr13 115295862 115296041 -4988271 + (TTC)n Simple_repeat Simple_repeat 3 179 0 5 1464 321 350 0 0 chr13 115296041 115296060 -4988252 + polypyrimidine Low_complexity Low_complexity 3 21 0 5 1464 719 286 43 0 chr13 115296064 115296274 -4988038 - ID_B1 SINE B4 -4 220 2 5 1464 376 27 82 0 chr13 115297026 115297099 -4987213 + (TTTTTG)n Simple_repeat Simple_repeat 2 80 0 6 1464 600 111 0 0 chr13 115298200 115298290 -4986022 + (TC)n Simple_repeat Simple_repeat 1 90 0 6 1464 1411 161 4 4 chr13 115299841 115300066 -4984246 + URR1B DNA MER1_type 1 225 0 6 1464 227 253 0 37 chr13 115300125 115300207 -4984105 + MLT1A1 LTR MaLR 327 405 -3 6 1464 334 350 0 20 chr13 115300607 115300706 -4983606 - MER5B DNA MER1_type -19 159 63 6 1464 1052 68 0 93 chr13 115300722 115300884 -4983428 - B1_Mus1 SINE Alu -1 147 1 6 1464 333 0 0 0 chr13 115300922 115300959 -4983353 + (TC)n Simple_repeat Simple_repeat 2 38 0 6 1464 279 79 0 0 chr13 115300959 115300996 -4983316 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1464 630 264 7 0 chr13 115301003 115301143 -4983169 - RSINE1 SINE B4 -24 141 1 6 1464 275 360 79 0 chr13 115301357 115301471 -4982841 - MIR SINE MIR -105 157 35 6 1464 466 274 17 8 chr13 115301617 115301735 -4982577 + PB1D7 SINE Alu 2 120 0 6 1464 415 265 192 11 chr13 115301843 115302025 -4982287 + ID_B1 SINE B4 8 222 -2 6 1464 27 0 0 0 chr13 115302185 115302212 -4982100 + AT_rich Low_complexity Low_complexity 1 27 0 6 1464 219 367 23 38 chr13 115303204 115303337 -4980975 + MER5A DNA MER1_type 56 186 -3 6 1464 267 269 76 25 chr13 115303819 115303937 -4980375 - MIRb SINE MIR -126 142 19 6 1464 470 282 82 53 chr13 115303956 115304162 -4980150 + MER20 DNA MER1_type 2 213 -6 6 1464 297 75 0 0 chr13 115304549 115304589 -4979723 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 6 1464 210 176 0 0 chr13 115304590 115304624 -4979688 + T-rich Low_complexity Low_complexity 1 34 0 6 1464 311 329 133 0 chr13 115304707 115304865 -4979447 - LFSINE_Vert SINE SINE -276 183 5 6 1464 1669 42 0 0 chr13 115306404 115306596 -4977716 + B2_Mm1a SINE B2 2 193 0 6 1464 293 356 47 19 chr13 115306803 115307015 -4977297 - MER46C DNA MER2_type -49 289 72 6 1464 848 197 114 15 chr13 115308512 115308713 -4975599 + URR1A DNA MER1_type 1 221 -5 6 1464 1614 177 58 19 chr13 115308803 115309165 -4975147 - Lx9 LINE L1 -4 7640 7265 6 1464 1221 115 6 6 chr13 115309178 115309361 -4974951 - B2_Mm2 SINE B2 -9 186 4 6 1464 280 188 130 0 chr13 115309373 115309442 -4974870 - Lx8 LINE L1 -136 7337 7260 6 1464 203 103 0 25 chr13 115309652 115309692 -4974620 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 6 1464 628 282 97 0 chr13 115309750 115309945 -4974367 + B3 SINE B2 2 215 -1 6 1464 873 138 12 12 chr13 115310172 115310341 -4973971 + CT-rich Low_complexity Low_complexity 2 170 0 6 1464 805 288 135 21 chr13 115310710 115310998 -4973314 + MTE2b LTR MaLR 1 326 -53 6 1464 820 104 7 7 chr13 115310998 115311133 -4973179 + (TTCC)n Simple_repeat Simple_repeat 1 135 0 6 1464 805 288 135 21 chr13 115311133 115311184 -4973128 + MTE2b LTR MaLR 327 378 -1 6 1464 357 208 0 40 chr13 115311918 115311993 -4972319 - B1_Mus2 SINE Alu -5 142 71 6 1464 3267 81 12 0 chr13 115312381 115312813 -4971499 + L1_Mus1 LINE L1 6129 6565 -2 6 1464 201 74 0 0 chr13 115314200 115314227 -4970085 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1464 531 256 104 0 chr13 115314741 115314905 -4969407 - MER20 DNA MER1_type -6 213 33 6 1464 5531 33 9 0 chr13 115314905 115315547 -4968765 + L1Md_F3 LINE L1 5935 6582 -2 6 1464 26 0 0 0 chr13 115316083 115316109 -4968203 + AT_rich Low_complexity Low_complexity 1 26 0 6 1464 289 109 18 18 chr13 115316283 115316339 -4967973 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 6 1464 189 0 0 0 chr13 115316367 115316388 -4967924 + (GA)n Simple_repeat Simple_repeat 2 22 0 6 1464 588 308 37 70 chr13 115316715 115317089 -4967223 + MER121 Unknown Unknown 8 369 -43 6 1464 1613 176 146 63 chr13 115317842 115318302 -4966010 - RMER15 LTR ERVL -51 524 27 6 1464 265 169 0 106 chr13 115318407 115318473 -4965839 - RMER15 LTR ERVL -516 59 1 6 1464 415 314 51 34 chr13 115318552 115318730 -4965582 + MER5A DNA MER1_type 3 183 -6 6 1464 2169 92 25 3 chr13 115318891 115319206 -4965106 - L1_Mus3 LINE L1 -1 6637 6316 6 1464 739 161 36 42 chr13 115319758 115319926 -4964386 + URR1B DNA MER1_type 59 225 0 6 1464 358 233 28 28 chr13 115319979 115320085 -4964227 - PB1D10 SINE Alu 0 117 12 6 1464 259 209 47 0 chr13 115320924 115321003 -4963309 - ID_B1 SINE B4 -164 128 44 6 1464 846 78 0 0 chr13 115321066 115321181 -4963131 + (TG)n Simple_repeat Simple_repeat 1 115 0 6 1464 450 306 15 7 chr13 115321187 115321322 -4962990 - RSINE1 SINE B4 -28 137 2 6 1464 449 262 70 70 chr13 115321370 115321526 -4962786 - RSINE1 SINE B4 0 165 10 6 1464 369 230 230 0 chr13 115321764 115321916 -4962396 + Lx8 LINE L1 7287 7473 0 6 1464 494 274 161 0 chr13 115323270 115323456 -4960856 - ID_B1 SINE B4 -8 216 1 6 1464 341 322 0 11 chr13 115323471 115323565 -4960747 - MER58A DNA MER1_type -107 117 25 6 1464 219 247 13 0 chr13 115324196 115324273 -4960039 + A-rich Low_complexity Low_complexity 3 80 0 6 1464 1700 172 89 5 chr13 115324924 115325293 -4959019 + Lx9 LINE L1 7244 7643 -1 6 1464 192 97 0 0 chr13 115325804 115325835 -4958477 + (T)n Simple_repeat Simple_repeat 1 31 0 6 1464 683 148 0 64 chr13 115325900 115326088 -4958224 + CT-rich Low_complexity Low_complexity 1 176 0 6 1464 444 249 4 18 chr13 115326131 115326360 -4957952 + CT-rich Low_complexity Low_complexity 1 226 0 6 1464 833 29 10 0 chr13 115326367 115326471 -4957841 + (TCTCC)n Simple_repeat Simple_repeat 3 107 0 6 1464 285 294 50 43 chr13 115326471 115326583 -4957729 - B1_Mus1 SINE Alu 0 149 34 6 1464 495 345 60 26 chr13 115326807 115327191 -4957121 + L1M5 LINE L1 4519 4915 -1231 6 1464 210 37 0 0 chr13 115327237 115327264 -4957048 + (CAG)n Simple_repeat Simple_repeat 1 27 0 6 1464 342 0 0 0 chr13 115327264 115327302 -4957010 + (CCA)n Simple_repeat Simple_repeat 1 38 0 6 1464 611 255 28 28 chr13 115327323 115327468 -4956844 - B4A SINE B4 0 292 148 6 1464 432 0 0 0 chr13 115327551 115327599 -4956713 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 6 1464 21 0 0 0 chr13 115328641 115328662 -4955650 + AT_rich Low_complexity Low_complexity 1 21 0 6 1464 2525 128 5 3 chr13 115328733 115329125 -4955187 - L1_Mm LINE L1 -1761 4122 3730 6 1464 3207 3 0 71 chr13 115329190 115329585 -4954727 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1464 6816 55 11 16 chr13 115329585 115330442 -4953870 - IAPEz-int LTR ERVK 0 6481 5630 6 1464 24663 48 21 20 chr13 115330428 115333492 -4950820 - IAPEz-int LTR ERVK -3405 3076 8 6 1464 3172 3 0 71 chr13 115333492 115333887 -4950425 - IAPLTR1_Mm LTR ERVK 0 367 1 6 1464 180 77 0 0 chr13 115333887 115333913 -4950399 + (CATA)n Simple_repeat Simple_repeat 4 29 0 6 1464 225 0 0 0 chr13 115334042 115334067 -4950245 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 6 1464 964 260 131 3 chr13 115334511 115334824 -4949488 + Lx8 LINE L1 6245 6597 -876 6 1464 916 237 164 139 chr13 115334982 115335169 -4949143 + Lx8 LINE L1 6605 6812 -661 6 1464 216 204 23 0 chr13 115335169 115335213 -4949099 - B4 SINE B4 -245 47 3 6 1464 916 237 164 139 chr13 115335213 115335506 -4948806 + Lx8 LINE L1 6813 7141 -332 6 1464 283 359 51 97 chr13 115335707 115336080 -4948232 - ORR1E LTR MaLR 0 359 4 6 1464 329 318 96 43 chr13 115336080 115336264 -4948048 - MLT1A LTR MaLR -158 216 23 6 1464 613 303 65 0 chr13 115336301 115336486 -4947826 - B3 SINE B2 -19 197 1 6 1464 285 29 0 0 chr13 115336504 115336538 -4947774 + (CA)n Simple_repeat Simple_repeat 2 35 0 6 1464 315 0 0 0 chr13 115337012 115337047 -4947265 + (CAA)n Simple_repeat Simple_repeat 3 37 0 6 1464 315 0 0 0 chr13 115338075 115338110 -4946202 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 6 1464 4258 161 14 12 chr13 115338125 115338857 -4945455 - Lx LINE L1 -12 6642 5910 6 1464 5102 194 88 50 chr13 115339151 115339745 -4944567 + Lx9 LINE L1 6161 6773 -871 6 1464 1938 50 8 0 chr13 115339745 115339985 -4944327 - L1_Mus1 LINE L1 0 6567 6326 6 1464 5102 194 88 50 chr13 115339985 115340819 -4943493 + Lx9 LINE L1 6774 7643 -1 6 1464 552 30 0 0 chr13 115340824 115340890 -4943422 + (GA)n Simple_repeat Simple_repeat 1 66 0 6 1464 383 233 11 55 chr13 115340921 115341012 -4943300 - ORR1E LTR MaLR -270 89 3 6 1464 861 267 108 14 chr13 115341087 115341379 -4942933 - ORR1D2 LTR MaLR -2 368 65 6 1464 479 278 42 42 chr13 115341422 115341662 -4942650 - Charlie5 DNA MER1_type -1 2623 2384 6 1464 36 40 0 0 chr13 115341717 115341767 -4942545 + AT_rich Low_complexity Low_complexity 1 50 0 6 1464 207 241 19 0 chr13 115342536 115342590 -4941722 + T-rich Low_complexity Low_complexity 4 58 0 6 1464 260 130 22 0 chr13 115343158 115343204 -4941108 - MTE2b LTR MaLR 0 379 333 6 22 659 277 39 22 chr13 115343224 115343405 -4940907 - MTE2b LTR MaLR -191 188 5 6 1465 5234 97 79 78 chr13 115344287 115345265 -4939047 - L1_Mus2 LINE L1 0 6566 5588 6 1465 2351 242 47 45 chr13 115345725 115346366 -4937946 - Lx6 LINE L1 -2 7458 6817 6 1465 340 344 32 53 chr13 115346409 115346727 -4937585 - L1M4 LINE L1 -404 5758 5451 6 1465 730 187 246 0 chr13 115346775 115346946 -4937366 - B3 SINE B2 -3 213 1 6 1465 197 254 26 9 chr13 115347044 115347159 -4937153 + CT-rich Low_complexity Low_complexity 2 118 0 6 1465 884 200 135 112 chr13 115347551 115347951 -4936361 - Lx7 LINE L1 0 7696 7288 6 1465 2346 182 72 15 chr13 115347955 115348430 -4935882 + RLTR16 LTR ERVK 4 505 0 6 1465 6927 199 34 65 chr13 115348430 115350766 -4933546 - Lx7 LINE L1 -420 7276 4937 6 1465 2318 135 8 6 chr13 115350766 115351117 -4933195 + RLTR14 LTR ERV1 31 382 0 6 1465 6927 199 34 65 chr13 115351117 115351776 -4932536 - Lx7 LINE L1 -420 4936 4275 6 1465 225 65 0 0 chr13 115351776 115351807 -4932505 + (TG)n Simple_repeat Simple_repeat 1 31 0 6 1465 3986 159 32 24 chr13 115351807 115351992 -4932320 - Lx7 LINE L1 -1606 4274 4079 6 1465 1601 202 88 64 chr13 115352000 115352535 -4931777 - Lx7 LINE L1 -6936 792 245 6 1465 408 270 43 24 chr13 115352535 115352744 -4931568 - L1MCa LINE L1 -5357 1151 939 6 1465 3016 271 85 21 chr13 115352744 115354242 -4930070 - L1_Mur3 LINE L1 -1289 4591 2998 6 1465 4100 218 63 7 chr13 115354267 115355267 -4929045 + Lx5 LINE L1 5995 7050 0 6 1465 291 229 25 8 chr13 115355365 115355378 -4928934 + ORR1B1-int LTR MaLR 634 648 -861 6 1465 1118 68 7 0 chr13 115355378 115355524 -4928788 + B1_Mm SINE Alu 1 147 0 6 1465 282 106 0 0 chr13 115355576 115355623 -4928689 + (A)n Simple_repeat Simple_repeat 1 47 0 6 1465 2866 208 30 81 chr13 115355631 115356406 -4927906 - Lx7 LINE L1 -158 7538 6804 6 1465 326 280 25 31 chr13 115356420 115356582 -4927730 - L1_Rod LINE L1 -2836 3011 2851 7 1465 773 299 100 7 chr13 115356690 115356990 -4927322 + MER46C DNA MER2_type 2 329 -9 7 1465 433 301 102 5 chr13 115357238 115357425 -4926887 - Charlie20a DNA Charlie -280 527 323 7 1465 195 42 0 0 chr13 115358081 115358105 -4926207 + (A)n Simple_repeat Simple_repeat 1 24 0 7 1465 531 112 0 0 chr13 115358409 115358489 -4925823 + (TG)n Simple_repeat Simple_repeat 1 80 0 7 1465 21 0 0 0 chr13 115358587 115358608 -4925704 + AT_rich Low_complexity Low_complexity 1 21 0 7 1465 625 279 0 28 chr13 115359232 115359376 -4924936 - RSINE1 SINE B4 -12 153 14 7 1465 342 0 0 0 chr13 115359376 115359414 -4924898 + (CATA)n Simple_repeat Simple_repeat 2 39 0 7 1465 1675 219 66 2 chr13 115359435 115359860 -4924452 - Lx9 LINE L1 -7 7637 7186 7 1465 294 164 0 0 chr13 115359975 115360030 -4924282 + (TATG)n Simple_repeat Simple_repeat 1 55 0 7 1465 1113 51 0 0 chr13 115360203 115360341 -4923971 + B1_Mm SINE Alu 1 138 -9 7 1465 225 0 0 0 chr13 115360341 115360366 -4923946 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 1465 1285 85 28 0 chr13 115360856 115361032 -4923280 + B2_Mm2 SINE B2 1 181 -14 7 1465 1024 216 5 5 chr13 115361054 115361259 -4923053 - B3 SINE B2 -11 205 1 7 1465 560 255 70 45 chr13 115362052 115362253 -4922059 - MamRep434 DNA TcMar -144 282 77 7 1465 205 250 0 0 chr13 115363068 115363108 -4921204 + polypyrimidine Low_complexity Low_complexity 4 43 0 7 1465 268 180 29 39 chr13 115363111 115363215 -4921097 + CT-rich Low_complexity Low_complexity 3 105 0 7 1465 953 126 35 0 chr13 115363698 115363841 -4920471 - B1_Mur4 SINE Alu 0 150 3 7 1465 378 310 68 52 chr13 115364572 115365069 -4919243 - L1MC3 LINE L1 -15 7770 7266 7 1465 325 324 83 0 chr13 115365075 115365183 -4919129 - PB1D10 SINE Alu 0 117 1 7 1465 337 326 22 0 chr13 115365097 115365189 -4919123 - ID_B1 SINE B4 -55 169 76 7 1465 585 231 251 9 chr13 115365195 115365500 -4918812 - L1MC3 LINE L1 -528 7257 6878 7 1465 275 327 20 143 chr13 115365754 115366047 -4918265 - ORR1E LTR MaLR 0 359 103 7 1465 3629 58 19 1 chr13 115366738 115367263 -4917049 - Lx3_Mus LINE L1 -929 6080 5548 7 1465 874 180 97 0 chr13 115367320 115367548 -4916764 + Lx9 LINE L1 7394 7643 -1 7 1465 22 0 0 0 chr13 115367982 115368004 -4916308 + AT_rich Low_complexity Low_complexity 1 22 0 7 1465 1203 303 38 63 chr13 115368134 115368746 -4915566 - MER82 DNA MER2_type -1 652 2 7 1465 181 364 0 57 chr13 115370314 115370384 -4913928 - MIR3 SINE MIR -139 69 4 7 1465 555 135 0 0 chr13 115370743 115370839 -4913473 + (CAA)n Simple_repeat Simple_repeat 1 96 0 7 1465 183 197 106 106 chr13 115371075 115371160 -4913152 - L2b LINE L2 -120 3255 3171 7 1465 953 117 0 13 chr13 115371902 115372058 -4912254 + (GAAA)n Simple_repeat Simple_repeat 3 156 0 7 1465 1116 90 0 0 chr13 115372143 115372367 -4911945 + (CA)n Simple_repeat Simple_repeat 1 224 0 7 1465 2519 276 84 29 chr13 115375879 115376928 -4907384 - Lx9 LINE L1 -22 7622 6516 7 1465 315 149 0 0 chr13 115377448 115377495 -4906817 - ORR1A4 LTR MaLR -8 359 313 7 1465 637 169 0 133 chr13 115377495 115377645 -4906667 - ORR1A4 LTR MaLR -199 130 1 7 1465 8867 147 75 118 chr13 115377645 115378915 -4905397 - ORR1A4-int LTR MaLR 0 1963 740 7 1465 2418 99 0 0 chr13 115378915 115379238 -4905074 - ORR1A2 LTR MaLR 0 327 5 7 1465 8867 147 75 118 chr13 115379238 115380017 -4904295 - ORR1A4-int LTR MaLR -1224 739 1 7 1465 460 116 14 0 chr13 115380017 115380086 -4904226 - ORR1A4 LTR MaLR 0 329 260 7 1465 15861 19 0 0 chr13 115380086 115382012 -4902300 + L1Md_T LINE L1 3661 5586 -297 7 1465 9031 6 0 0 chr13 115382012 115383008 -4901304 + L1Md_T LINE L1 5587 6582 0 7 1465 1497 144 18 70 chr13 115383017 115383301 -4901011 - ORR1A4 LTR MaLR -58 271 3 7 1465 252 0 0 0 chr13 115383926 115383954 -4900358 + (A)n Simple_repeat Simple_repeat 1 28 0 7 1465 4557 43 9 5 chr13 115384084 115384642 -4899670 + LTRIS2 LTR ERV1 5 564 0 7 1465 1777 149 114 12 chr13 115384665 115384998 -4899314 - ORR1B2 LTR MaLR 0 367 1 7 1465 225 94 0 0 chr13 115385427 115385459 -4898853 + (ATG)n Simple_repeat Simple_repeat 2 33 0 7 1465 3671 127 77 31 chr13 115385934 115386640 -4897672 - RMER6A LTR ERVK -18 738 1 7 1465 263 328 17 33 chr13 115387090 115387210 -4897102 + L3 LINE CR1 61 178 -4311 7 1465 210 143 0 0 chr13 115388009 115388044 -4896268 + (CAAT)n Simple_repeat Simple_repeat 2 36 0 7 1465 511 356 0 7 chr13 115388190 115388340 -4895972 - RSINE1 SINE B4 -13 152 4 7 1465 790 236 77 25 chr13 115388408 115388604 -4895708 - MTD LTR MaLR 0 419 214 7 1465 207 281 0 0 chr13 115388704 115388761 -4895551 + (TATG)n Simple_repeat Simple_repeat 2 58 0 7 1465 222 277 14 122 chr13 115388761 115388835 -4895477 - ID4_ SINE ID -10 73 8 7 1465 312 356 58 15 chr13 115391218 115391423 -4892889 - MIRb SINE MIR -8 260 47 7 1465 596 315 56 0 chr13 115391680 115391877 -4892435 + MLT1A0 LTR MaLR 155 362 -3 7 1465 201 147 0 0 chr13 115392566 115392600 -4891712 + (GGGAGA)n Simple_repeat Simple_repeat 1 34 0 7 1465 2834 67 0 35 chr13 115392656 115393027 -4891285 - L1Md_F2 LINE L1 -12 6570 6213 7 1465 1074 116 0 0 chr13 115395012 115395237 -4889075 + (TTC)n Simple_repeat Simple_repeat 1 225 0 7 1465 236 241 17 0 chr13 115395726 115395784 -4888528 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 7 1465 573 278 113 58 chr13 115395797 115396072 -4888240 - B4A SINE B4 0 292 3 7 1465 216 0 0 0 chr13 115396204 115396228 -4888084 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1465 335 273 199 19 chr13 115397212 115397410 -4886902 - LTR78 LTR ERV1 -58 1246 1013 7 1465 346 335 108 16 chr13 115397797 115397982 -4886330 - MLT1H2 LTR MaLR -1 488 287 7 1465 289 101 402 38 chr13 115398170 115398277 -4886035 - B2_Mm2 SINE B2 -3 192 47 7 1465 1312 97 11 22 chr13 115398324 115398504 -4885808 - B2_Mm1t SINE B2 -14 179 2 7 1465 212 332 179 45 chr13 115398521 115398700 -4885612 - B4 SINE B4 -10 282 73 7 1465 2379 158 53 35 chr13 115398700 115399152 -4885160 - Lx LINE L1 0 6654 6195 7 1465 255 250 0 0 chr13 115399152 115399196 -4885116 - B4A SINE B4 -220 72 29 7 1465 273 310 58 0 chr13 115399512 115399599 -4884713 - LTR78 LTR ERV1 -1212 92 1 7 1465 285 195 0 25 chr13 115400588 115400667 -4883645 + Lx6 LINE L1 7354 7430 -30 7 1465 812 130 12 12 chr13 115400667 115400830 -4883482 + CT-rich Low_complexity Low_complexity 3 165 0 7 1465 405 102 0 0 chr13 115400835 115400894 -4883418 + (CAT)n Simple_repeat Simple_repeat 3 61 0 7 1465 762 239 246 24 chr13 115400896 115401179 -4883133 - MTEa LTR MaLR -33 346 1 7 1465 229 220 19 29 chr13 115401226 115401329 -4882983 + (TAA)n Simple_repeat Simple_repeat 2 103 0 7 1465 978 114 175 6 chr13 115402536 115402713 -4881599 - Lx3_Mus LINE L1 -8 7001 6795 7 1465 3380 71 9 0 chr13 115402712 115403146 -4881166 + L1_Mur1 LINE L1 5440 5877 -9 7 1465 1387 278 76 30 chr13 115403213 115403714 -4880598 - Lx8 LINE L1 -43 7430 6907 7 1465 606 276 60 113 chr13 115403918 115404200 -4880112 + ORR1E LTR MaLR 52 318 -41 7 1465 650 24 24 0 chr13 115407121 115407204 -4877108 + (TCCC)n Simple_repeat Simple_repeat 1 85 0 7 1465 289 302 116 0 chr13 115407466 115407552 -4876760 - ID_B1 SINE B4 -128 96 1 7 1465 267 345 92 60 chr13 115408249 115408499 -4875813 - MLT1L LTR MaLR -138 472 215 7 1465 783 259 17 48 chr13 115408666 115408892 -4875420 - B3 SINE B2 -1 194 1 7 1465 462 327 25 6 chr13 115410335 115410495 -4873817 + MER45R DNA Tip100 1 163 -1418 7 1465 448 317 58 44 chr13 115411025 115411299 -4873013 - LTR16A LTR ERVL -158 293 16 7 1465 3180 14 2 78 chr13 115412411 115412808 -4871504 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1465 29323 23 1 1 chr13 115412808 115416079 -4868233 - IAPEz-int LTR ERVK 0 6481 3210 7 1465 7706 91 94 21 chr13 115416078 115417295 -4867017 - IAPEz-int LTR ERVK -5168 1313 8 7 1465 3153 16 2 78 chr13 115417295 115417692 -4866620 - IAPLTR1_Mm LTR ERVK 0 367 1 7 1465 402 165 0 0 chr13 115417745 115417824 -4866488 + (TG)n Simple_repeat Simple_repeat 1 79 0 7 1465 376 216 82 38 chr13 115417832 115417991 -4866321 + Lx9 LINE L1 7464 7629 -15 7 1465 2641 236 158 37 chr13 115417995 115418827 -4865485 - MTD-int LTR MaLR -326 932 1 7 1465 1851 215 80 3 chr13 115418827 115419214 -4865098 - MTD LTR MaLR 0 419 3 7 1465 255 61 0 0 chr13 115419231 115419264 -4865048 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1465 508 314 12 89 chr13 115419406 115419665 -4864647 - Lx8 LINE L1 -16 7457 7219 7 1465 21 0 0 0 chr13 115421023 115421044 -4863268 + AT_rich Low_complexity Low_complexity 1 21 0 7 1465 240 111 0 0 chr13 115421044 115421080 -4863232 + (TG)n Simple_repeat Simple_repeat 1 36 0 7 1465 435 272 141 42 chr13 115421126 115421268 -4863044 - RSINE1 SINE B4 0 165 10 7 1465 396 219 186 47 chr13 115421606 115421735 -4862577 - B1_Mur1 SINE Alu -1 148 2 7 1465 340 233 14 14 chr13 115421773 115421847 -4862465 - ID4_ SINE ID -3 80 7 7 1465 216 0 0 0 chr13 115422097 115422121 -4862191 + (TG)n Simple_repeat Simple_repeat 1 24 0 7 1465 216 0 0 0 chr13 115423534 115423558 -4860754 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7 1465 4799 100 3 6 chr13 115423558 115424245 -4860067 - MusHAL1 LINE L1 -774 1938 1255 7 1465 249 350 92 27 chr13 115425386 115425571 -4858741 + L3 LINE CR1 4092 4288 -201 7 1465 182 395 72 18 chr13 115425636 115425747 -4858565 - L2b LINE L2 -46 3329 3213 7 1465 21 36 0 0 chr13 115426744 115426772 -4857540 + AT_rich Low_complexity Low_complexity 1 28 0 7 1465 701 114 35 12 chr13 115428378 115428547 -4855765 + (TCTA)n Simple_repeat Simple_repeat 2 174 0 7 1465 339 305 78 86 chr13 115430155 115430424 -4853888 - ORR1E LTR MaLR -1 358 92 7 1465 253 219 30 30 chr13 115432735 115432834 -4851478 + L1MC4 LINE L1 7719 7817 -225 7 1465 208 154 19 19 chr13 115432899 115432952 -4851360 + (CATATA)n Simple_repeat Simple_repeat 2 54 0 7 1465 227 103 26 0 chr13 115432953 115432992 -4851320 + (GA)n Simple_repeat Simple_repeat 2 41 0 7 1465 21 36 0 0 chr13 115433026 115433054 -4851258 + AT_rich Low_complexity Low_complexity 1 28 0 7 1465 675 37 0 0 chr13 115433718 115433800 -4850512 + (GA)n Simple_repeat Simple_repeat 1 82 0 7 1465 505 309 48 38 chr13 115434506 115434715 -4849597 - MIRb SINE MIR -13 255 45 8 1465 471 18 0 0 chr13 115434752 115434808 -4849504 + (CA)n Simple_repeat Simple_repeat 1 56 0 8 1465 555 16 0 0 chr13 115434809 115434873 -4849439 + (GA)n Simple_repeat Simple_repeat 1 64 0 8 1465 379 226 90 76 chr13 115435029 115435173 -4849139 + LTR48 LTR ERV1 1 146 -641 8 1465 22 35 0 0 chr13 115435873 115435902 -4848410 + AT_rich Low_complexity Low_complexity 1 29 0 8 1465 350 245 107 40 chr13 115436308 115436457 -4847855 - L1MA4 LINE L1 -371 5929 5771 8 1465 489 324 141 15 chr13 115436998 115437576 -4846736 - L1MEc LINE L1 -3682 2700 2053 8 1465 2404 154 43 0 chr13 115437599 115437995 -4846317 - MTC LTR MaLR -8 413 1 8 1465 398 236 46 25 chr13 115438076 115438291 -4846021 - L1MEc LINE L1 -4552 1911 1576 8 1465 573 15 0 0 chr13 115438491 115438557 -4845755 + (CA)n Simple_repeat Simple_repeat 2 67 0 8 1465 22 0 0 0 chr13 115439760 115439782 -4844530 + AT_rich Low_complexity Low_complexity 1 22 0 8 1465 227 200 0 0 chr13 115440681 115440721 -4843591 + L1M3 LINE L1 3773 3812 -2328 8 1465 454 286 237 11 chr13 115440735 115440912 -4843400 - ID_B1 SINE B4 -5 219 3 8 1465 375 23 0 0 chr13 115442272 115442316 -4841996 + (CA)n Simple_repeat Simple_repeat 2 45 0 8 1465 214 265 103 0 chr13 115442360 115442428 -4841884 + L2c LINE L2 3313 3387 0 8 1465 4201 59 2 0 chr13 115442588 115443081 -4841231 - L1_Mus1 LINE L1 0 6567 6074 8 1465 2488 67 3 0 chr13 115443081 115443397 -4840915 + L1_Mus1 LINE L1 5754 6070 -497 8 1465 480 35 0 0 chr13 115444097 115444155 -4840157 + (TATG)n Simple_repeat Simple_repeat 2 59 0 8 1465 1025 28 28 0 chr13 115444155 115444300 -4840012 + (TCTA)n Simple_repeat Simple_repeat 2 150 0 8 1465 378 0 0 0 chr13 115444326 115444368 -4839944 + (TCTG)n Simple_repeat Simple_repeat 2 43 0 8 1465 477 264 119 96 chr13 115445981 115446232 -4838080 + MLT1C LTR MaLR 3 259 -208 8 1465 289 313 27 40 chr13 115446249 115446359 -4837953 + MLT1C LTR MaLR 312 403 -64 8 1465 180 0 0 0 chr13 115447082 115447102 -4837210 + (CATA)n Simple_repeat Simple_repeat 4 23 0 8 1465 21 57 0 0 chr13 115447797 115447832 -4836480 + AT_rich Low_complexity Low_complexity 1 35 0 8 1465 4980 64 3 5 chr13 115448251 115448894 -4835418 - L1_Mus1 LINE L1 -1 6566 5925 8 1465 1999 131 12 18 chr13 115449172 115449499 -4834813 + ORR1A3 LTR MaLR 1 325 -1 8 1465 287 98 0 38 chr13 115449820 115449873 -4834439 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 8 1465 300 292 86 18 chr13 115450217 115450496 -4833816 + L1M4c LINE L1 739 1036 -5348 8 1465 6683 144 28 5 chr13 115450543 115451977 -4832335 - Lx4B LINE L1 -306 6752 5261 8 1465 1416 177 0 0 chr13 115451950 115452227 -4832085 - Lx4B LINE L1 -2715 3171 2895 8 1465 1881 176 16 0 chr13 115452220 115452657 -4831655 - Lx4B LINE L1 -4265 1612 1169 8 1465 180 0 0 0 chr13 115452657 115452677 -4831635 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 8 1465 1552 204 35 2 chr13 115452677 115452913 -4831399 - Lx4B LINE L1 -5918 1168 923 8 1465 256 206 123 0 chr13 115453138 115453211 -4831101 + MER45B DNA Tip100 828 909 -131 8 1465 21 36 0 0 chr13 115453247 115453275 -4831037 + AT_rich Low_complexity Low_complexity 1 28 0 8 1465 1149 76 0 14 chr13 115453380 115453527 -4830785 - B1_Mm SINE Alu -2 145 1 8 1465 20699 127 35 20 chr13 115453548 115455830 -4828482 - Lx4A LINE L1 -1 7057 4732 8 1465 543 31 0 0 chr13 115455830 115455895 -4828417 + (TTTTG)n Simple_repeat Simple_repeat 2 66 0 8 1465 20699 119 33 37 chr13 115455895 115458507 -4825805 - Lx4A LINE L1 -1146 4731 2126 8 1465 3943 175 64 78 chr13 115458507 115459410 -4824902 + RMER19B LTR ERVK 1 891 -11 8 1465 5199 104 22 39 chr13 115459420 115460426 -4823886 - Lx4A LINE L1 -3748 2129 1142 8 1465 1798 181 18 44 chr13 115460425 115460812 -4823500 - Lx4A LINE L1 -6060 1026 650 8 1465 345 330 55 24 chr13 115460817 115461107 -4823205 - L1MA5 LINE L1 -127 6173 5859 8 1465 26 0 0 0 chr13 115461168 115461194 -4823118 + AT_rich Low_complexity Low_complexity 1 26 0 8 1465 277 200 0 0 chr13 115461366 115461426 -4822886 - L1_Mur2 LINE L1 -6324 388 329 8 1465 267 301 0 0 chr13 115461444 115461547 -4822765 - L1MA5 LINE L1 -603 5565 5463 8 1465 1347 167 6 17 chr13 115463053 115463305 -4821007 + MTC LTR MaLR 167 413 -8 8 1465 322 312 80 0 chr13 115463309 115463508 -4820804 - L1MA5 LINE L1 -1487 4656 4442 8 1465 260 314 0 0 chr13 115463534 115463604 -4820708 + PB1D10 SINE Alu 39 108 -9 8 1465 476 158 11 0 chr13 115463608 115463703 -4820609 + GA-rich Low_complexity Low_complexity 3 98 0 8 1465 328 243 0 41 chr13 115463704 115463777 -4820535 + ID4_ SINE ID 3 72 -11 8 1465 465 84 0 0 chr13 115463778 115463849 -4820463 + (CA)n Simple_repeat Simple_repeat 2 72 0 8 1465 318 273 129 32 chr13 115463894 115464049 -4820263 - L1MA5 LINE L1 -1827 4316 4147 8 1465 282 274 0 0 chr13 115464049 115464111 -4820201 + Lx8 LINE L1 6485 6546 -927 8 1465 723 201 30 0 chr13 115464116 115464250 -4820062 - B3A SINE B2 -60 138 1 8 1465 1193 290 33 37 chr13 115464279 115464770 -4819542 + Lx9 LINE L1 6931 7419 -225 8 1465 228 316 10 30 chr13 115464770 115464871 -4819441 - RLTR22_Mur LTR ERVK -450 1398 1300 8 1465 1667 252 45 13 chr13 115464982 115465585 -4818727 - L1MA5 LINE L1 -2013 4130 3509 8 1465 341 306 82 18 chr13 115465920 115465986 -4818326 + MTE2a LTR MaLR 60 124 -255 8 1465 474 33 0 0 chr13 115465986 115466046 -4818266 + (TG)n Simple_repeat Simple_repeat 1 60 0 8 1465 341 306 82 18 chr13 115466046 115466089 -4818223 + MTE2a LTR MaLR 125 175 -204 8 1465 469 50 0 0 chr13 115466090 115466150 -4818162 + L1VL2 LINE L1 167 226 -6109 8 1465 4044 124 18 14 chr13 115466150 115466806 -4817506 + L1VL2 LINE L1 9 667 -5668 8 1465 230 232 27 55 chr13 115467394 115467467 -4816845 + LTR79 LTR ERVL 382 452 -75 8 1465 357 24 0 0 chr13 115468996 115469038 -4815274 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1465 25 0 0 0 chr13 115470203 115470228 -4814084 + AT_rich Low_complexity Low_complexity 1 25 0 8 1465 193 260 60 0 chr13 115470284 115470334 -4813978 - L2c LINE L2 -39 3348 3296 8 1465 368 310 78 50 chr13 115470538 115470796 -4813516 + MLT1H2 LTR MaLR 225 489 0 8 1465 277 342 63 45 chr13 115473207 115473476 -4810836 + HERV16-int LTR ERVL 10 283 -4713 8 1466 288 303 52 78 chr13 115474789 115474943 -4809369 + RLTR14 LTR ERV1 233 382 0 8 1466 250 267 36 121 chr13 115475181 115475462 -4808850 - RMER17A LTR ERVK -326 425 169 8 1466 364 287 9 56 chr13 115475516 115475623 -4808689 + ID_B1 SINE B4 104 205 -19 8 1466 300 213 49 0 chr13 115475657 115475718 -4808594 + tRNA-Ala-GCY_ tRNA tRNA 8 71 -4 8 1466 230 288 13 76 chr13 115475663 115475742 -4808570 + ID_B1 SINE B4 23 96 -128 8 1466 542 63 0 12 chr13 115476102 115476182 -4808130 + (TG)n Simple_repeat Simple_repeat 2 80 0 8 1466 245 325 182 76 chr13 115476208 115476471 -4807841 - B4 SINE B4 -1 291 1 8 1466 331 333 195 30 chr13 115476490 115477050 -4807262 + L1MEf LINE L1 591 1242 -4958 8 1466 2251 63 3 23 chr13 115477117 115477426 -4806886 - L1_Mus2 LINE L1 0 6566 6264 8 1466 247 277 57 21 chr13 115477668 115477808 -4806504 + L1MEf LINE L1 1563 1707 -4493 8 1466 237 259 33 66 chr13 115478089 115478180 -4806132 + L1MD LINE L1 5497 5584 -2411 8 1466 1541 175 133 18 chr13 115478268 115478606 -4805706 + MTD LTR MaLR 1 377 -42 8 1466 686 217 20 71 chr13 115478702 115478900 -4805412 - RLTR14 LTR ERV1 -132 250 63 8 1466 994 74 0 7 chr13 115478901 115479096 -4805216 - L1Md_F2 LINE L1 0 6582 6433 8 1466 406 200 0 0 chr13 115479096 115479171 -4805141 - RLTR14 LTR ERV1 -307 75 1 8 1466 334 161 18 0 chr13 115479171 115479227 -4805085 + MTD LTR MaLR 363 419 0 8 1466 436 243 77 16 chr13 115479278 115479480 -4804832 + L1ME1 LINE L1 5730 5948 -236 8 1466 1167 268 25 91 chr13 115479826 115480179 -4804133 + MTE2b LTR MaLR 3 332 -47 8 1466 397 167 118 18 chr13 115480188 115480298 -4804014 - Lx9 LINE L1 -7 7637 7517 8 1466 423 0 0 0 chr13 115480298 115480345 -4803967 + (CA)n Simple_repeat Simple_repeat 2 48 0 8 1466 559 306 104 40 chr13 115480405 115480830 -4803482 - MLT2D LTR ERVL -7 457 10 8 1466 300 265 17 8 chr13 115480983 115481101 -4803211 - L1MB4 LINE L1 -1 6179 6061 8 1466 258 222 15 31 chr13 115481446 115481511 -4802801 - ID4_ SINE ID -18 65 2 8 1466 1216 42 0 0 chr13 115481567 115481710 -4802602 + B1_Mm SINE Alu 5 147 0 8 1466 213 62 20 40 chr13 115481710 115481760 -4802552 + (CAAAAA)n Simple_repeat Simple_repeat 6 54 0 8 1466 453 288 83 56 chr13 115481788 115481968 -4802344 - B3 SINE B2 -30 186 2 8 1466 396 0 0 0 chr13 115482206 115482250 -4802062 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 8 1466 331 341 16 0 chr13 115482416 115482539 -4801773 + LTR79 LTR ERVL 326 450 -77 8 1466 2098 126 16 78 chr13 115482899 115483270 -4801042 + ORR1B1 LTR MaLR 47 394 0 8 1466 513 278 0 0 chr13 115483338 115483446 -4800866 + PB1D9 SINE Alu 6 113 -7 8 1466 304 292 163 30 chr13 115483530 115483696 -4800616 + Lx8 LINE L1 7085 7272 -201 8 1466 41 48 0 0 chr13 115483839 115483901 -4800411 + AT_rich Low_complexity Low_complexity 1 62 0 8 1466 263 309 143 0 chr13 115484014 115484098 -4800214 + B1F2 SINE Alu 3 98 -51 8 1466 22 35 0 0 chr13 115486450 115486479 -4797833 + AT_rich Low_complexity Low_complexity 1 29 0 8 1466 1373 77 0 35 chr13 115486487 115486690 -4797622 + L1_Mus1 LINE L1 6372 6567 0 8 1466 817 309 5 56 chr13 115486700 115486834 -4797478 + B4 SINE B4 81 210 -82 8 1466 180 0 0 0 chr13 115486834 115486854 -4797458 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1466 240 86 0 0 chr13 115486860 115486895 -4797417 + (CA)n Simple_repeat Simple_repeat 1 35 0 8 1466 817 309 5 56 chr13 115486895 115486966 -4797346 + B4 SINE B4 211 282 -10 8 1466 477 110 0 0 chr13 115486983 115487056 -4797256 + (CA)n Simple_repeat Simple_repeat 2 74 0 8 1466 596 280 77 5 chr13 115488347 115488629 -4795683 + MERVL-int LTR ERVL 2315 2612 -2384 8 1466 272 371 67 15 chr13 115488891 115489159 -4795153 + MERVL-int LTR ERVL 3035 3316 -2441 8 1466 360 349 116 0 chr13 115490666 115490795 -4793517 + LTR16A1 LTR ERVL 2 145 -311 8 1466 257 220 165 35 chr13 115491069 115491154 -4793158 + LTR16A1 LTR ERVL 351 446 -10 8 1466 180 97 0 0 chr13 115493189 115493220 -4791092 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 8 1466 1510 255 26 6 chr13 115493519 115493862 -4790450 - ORR1D2 LTR MaLR 0 370 21 8 1466 364 351 40 29 chr13 115494098 115494271 -4790041 + MER45A DNA Tip100 2 176 -2 8 1466 182 171 0 24 chr13 115494587 115494629 -4789683 + GA-rich Low_complexity Low_complexity 1 41 0 8 1466 315 0 0 0 chr13 115494631 115494666 -4789646 + (TG)n Simple_repeat Simple_repeat 1 35 0 8 1466 585 0 0 0 chr13 115494666 115494730 -4789582 + (GA)n Simple_repeat Simple_repeat 1 65 0 8 1466 258 175 53 0 chr13 115494888 115494945 -4789367 + RMER1B Other Other 993 1052 -14 9 1466 502 304 102 42 chr13 115495893 115496207 -4788105 + MLT1A0 LTR MaLR 1 339 -35 9 1466 23 0 0 0 chr13 115496656 115496679 -4787633 + AT_rich Low_complexity Low_complexity 1 23 0 9 1466 398 304 23 51 chr13 115498706 115498883 -4785429 + MER45B DNA Tip100 713 884 -156 9 1466 315 217 0 16 chr13 115498911 115498972 -4785340 + MER45A DNA Tip100 113 169 -9 8 1466 564 160 0 0 chr13 115500061 115500161 -4784151 + CT-rich Low_complexity Low_complexity 4 103 0 1 1466 500 200 18 37 chr13 115500161 115500270 -4784042 - PB1D9 SINE Alu -13 107 1 2 1466 1528 148 160 91 chr13 115504471 115504821 -4779491 - ORR1B1 LTR MaLR -18 376 3 3 1466 295 339 64 8 chr13 115505003 115505125 -4779187 - LTR16D LTR ERVL 0 651 523 4 1466 886 309 68 34 chr13 115505125 115505447 -4778865 + MER2 DNA MER2_type 2 334 -11 5 1466 543 43 0 0 chr13 115505494 115505564 -4778748 + (CA)n Simple_repeat Simple_repeat 2 71 0 6 1466 5764 197 77 38 chr13 115505715 115507878 -4776434 + L1_Mur3 LINE L1 464 2703 -3177 7 1466 1441 201 121 73 chr13 115507874 115508437 -4775875 + Lx7 LINE L1 7106 7695 -1 8 1466 620 266 14 0 chr13 115508755 115508898 -4775414 + RSINE1 SINE B4 5 149 -16 9 1466 24 32 0 0 chr13 115508969 115509000 -4775312 + AT_rich Low_complexity Low_complexity 1 31 0 1 1466 5468 114 36 0 chr13 115509001 115509806 -4774506 - Lx3C LINE L1 -8 6968 6135 1 1466 428 321 6 25 chr13 115511389 115511552 -4772760 + CT-rich Low_complexity Low_complexity 4 163 0 1 1466 3111 117 35 46 chr13 115511579 115512118 -4772194 - Lx4A LINE L1 -4 7054 6522 1 1466 388 165 141 0 chr13 115512130 115512215 -4772097 - L1_Mur2 LINE L1 -6600 112 16 1 1466 378 0 0 0 chr13 115512285 115512327 -4771985 + (CA)n Simple_repeat Simple_repeat 2 43 0 1 1466 425 314 8 68 chr13 115512363 115512496 -4771816 - B1F1 SINE Alu -24 125 1 1 1466 275 0 29 0 chr13 115512977 115513012 -4771300 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1466 460 325 88 85 chr13 115513460 115513732 -4770580 - B4 SINE B4 -16 276 4 1 1466 8174 41 3 1 chr13 115513805 115514798 -4769514 + L1Md_F2 LINE L1 5588 6582 0 1 1466 21 0 0 0 chr13 115515215 115515236 -4769076 + AT_rich Low_complexity Low_complexity 1 21 0 2 1466 3410 75 31 0 chr13 115516274 115516726 -4767586 - L1_Mus3 LINE L1 -9 6629 6164 2 1466 1236 210 118 6 chr13 115517617 115517948 -4766364 + ORR1D1 LTR MaLR 7 374 0 2 1466 199 50 24 48 chr13 115518111 115518153 -4766159 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 2 1466 633 164 21 0 chr13 115518149 115518289 -4766023 + CT-rich Low_complexity Low_complexity 3 145 0 2 1466 223 172 16 79 chr13 115518294 115518357 -4765955 - B1_Mm SINE Alu 0 147 89 2 1466 460 200 21 69 chr13 115518368 115518513 -4765799 - Lx5 LINE L1 -5 7045 6908 2 1466 277 197 60 90 chr13 115518513 115518580 -4765732 - B1_Mur3 SINE Alu -44 105 41 2 1466 1460 289 86 32 chr13 115518821 115519655 -4764657 + L1MB7 LINE L1 5287 6165 -19 2 1466 321 270 23 23 chr13 115519898 115520027 -4764285 + (CA)n Simple_repeat Simple_repeat 1 129 0 2 1466 360 152 0 0 chr13 115520076 115520142 -4764170 + (CA)n Simple_repeat Simple_repeat 1 66 0 2 1466 673 52 10 20 chr13 115520429 115520528 -4763784 + (GAAA)n Simple_repeat Simple_repeat 1 98 0 3 1466 918 130 0 0 chr13 115520564 115520710 -4763602 + Lx2B LINE L1 5634 5779 -1221 3 1466 914 64 16 0 chr13 115520715 115520840 -4763472 - B1_Mus1 SINE Alu 0 148 22 3 1466 5668 173 43 16 chr13 115520840 115522036 -4762276 + Lx2B LINE L1 5770 6997 -3 3 1466 846 70 124 0 chr13 115522088 115522217 -4762095 - B1_Mus2 SINE Alu -1 146 2 3 1466 334 326 20 55 chr13 115522930 115523076 -4761236 - LTR16A LTR ERVL -160 291 151 3 1466 1217 55 0 0 chr13 115523080 115523225 -4761087 + B1_Mus2 SINE Alu 3 147 0 3 1466 189 0 0 0 chr13 115523225 115523246 -4761066 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1466 518 160 0 8 chr13 115523388 115523520 -4760792 + CT-rich Low_complexity Low_complexity 1 131 0 3 1466 252 0 0 0 chr13 115523521 115523549 -4760763 + (TG)n Simple_repeat Simple_repeat 2 29 0 3 1466 434 309 87 23 chr13 115525841 115526013 -4758299 - MT2A LTR ERVL 0 533 351 3 1466 2249 294 44 24 chr13 115526268 115527170 -4757142 - ERVL-int LTR ERVL -2603 3154 2235 4 1466 827 287 42 92 chr13 115527194 115527628 -4756684 - MERVL_2A-int LTR ERVL -4890 871 460 4 1466 24 67 0 0 chr13 115527655 115527700 -4756612 + AT_rich Low_complexity Low_complexity 1 45 0 4 1466 235 231 0 0 chr13 115527732 115527784 -4756528 - MLT2B1 LTR ERVL 0 567 516 4 1466 318 106 0 0 chr13 115527784 115527831 -4756481 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1466 3011 74 0 0 chr13 115528036 115528525 -4755787 - L1_Mus3 LINE L1 -718 5920 5432 4 1466 5358 77 8 0 chr13 115528527 115529240 -4755072 + L1_Mus3 LINE L1 5914 6632 -6 4 1466 288 371 10 0 chr13 115529402 115529499 -4754813 - MIRb SINE MIR -111 157 60 4 1466 203 231 15 30 chr13 115530167 115530234 -4754078 + GA-rich Low_complexity Low_complexity 2 67 0 4 1466 477 271 68 52 chr13 115531485 115531676 -4752636 + MIRc SINE MIR 54 247 -21 4 1466 219 69 0 0 chr13 115533159 115533188 -4751124 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 4 1466 1936 91 46 0 chr13 115533239 115533524 -4750788 - L1_Mus3 LINE L1 0 6638 6341 5 1466 1276 97 11 0 chr13 115533533 115533719 -4750593 - B2_Mm1a SINE B2 -4 189 2 5 1466 223 287 30 0 chr13 115534184 115534285 -4750027 + (CA)n Simple_repeat Simple_repeat 1 104 0 5 1466 279 337 36 0 chr13 115534582 115534665 -4749647 + MIRb SINE MIR 121 206 -62 5 1466 556 297 38 67 chr13 115534665 115534903 -4749409 - MLT1D LTR MaLR 0 505 275 5 1466 690 332 128 43 chr13 115536135 115536556 -4747756 - LTR16E2 LTR ERVL -15 553 97 5 1466 686 292 88 5 chr13 115536601 115536818 -4747494 - ORR1D2 LTR MaLR -4 366 132 5 1466 539 280 112 4 chr13 115536938 115537178 -4747134 - L1MA4 LINE L1 -370 5930 5665 5 1466 1042 240 39 129 chr13 115537187 115537598 -4746714 + MTE2a LTR MaLR 1 374 -5 5 1466 600 312 30 11 chr13 115537617 115537904 -4746408 - L1MA4 LINE L1 -264 5613 5352 5 1466 242 363 19 19 chr13 115538502 115538606 -4745706 + MLT1K LTR MaLR 478 581 -14 5 1466 527 258 35 88 chr13 115539355 115539525 -4744787 - MTEb LTR MaLR 0 379 219 6 1466 416 205 0 46 chr13 115539503 115539590 -4744722 - MTEb LTR MaLR -296 83 1 6 1466 1197 255 95 17 chr13 115541437 115541784 -4742528 - MTE2b LTR MaLR 0 379 6 6 1466 1458 256 37 8 chr13 115541965 115542320 -4741992 - MTE2b LTR MaLR -7 372 8 6 1466 4967 50 8 6 chr13 115542453 115543078 -4741234 - L1Md_F2 LINE L1 -3 6579 5954 6 1466 434 280 164 65 chr13 115543133 115543243 -4741069 - L1MEg LINE L1 -2170 3976 3877 6 1466 664 261 52 26 chr13 115543243 115543436 -4740876 + B3A SINE B2 1 198 0 6 1466 434 280 164 65 chr13 115543436 115543722 -4740590 - L1MEg LINE L1 -2270 3876 3541 6 1466 337 295 28 33 chr13 115544011 115544193 -4740119 - L1MEg LINE L1 -4730 1512 1332 6 1466 256 290 11 11 chr13 115544324 115544418 -4739894 + L1M3 LINE L1 4678 4771 -1369 6 1466 308 212 36 48 chr13 115544436 115544520 -4739792 + MER5A1 DNA MER1_type 84 166 0 6 1466 261 308 65 0 chr13 115545029 115545136 -4739176 - MLT1B LTR MaLR -14 453 340 6 1466 245 182 0 18 chr13 115545186 115545242 -4739070 + GA-rich Low_complexity Low_complexity 3 57 0 6 1466 353 274 153 27 chr13 115545264 115545414 -4738898 - MLT1B LTR MaLR -221 169 1 6 1466 555 132 45 19 chr13 115548551 115548584 -4735728 + polypurine Low_complexity Low_complexity 1 33 0 7 1466 1119 56 5 38 chr13 115548584 115548770 -4735542 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 7 1466 555 132 45 19 chr13 115548770 115548891 -4735421 + GA-rich Low_complexity Low_complexity 34 157 0 7 1466 329 279 130 14 chr13 115548891 115549029 -4735283 + HAL1-3A_ME LINE L1 2284 2437 -421 7 1466 931 86 34 11 chr13 115549031 115549207 -4735105 + (GA)n Simple_repeat Simple_repeat 1 180 0 7 1466 218 56 28 0 chr13 115549394 115549430 -4734882 + (CAAAAA)n Simple_repeat Simple_repeat 2 38 0 7 1466 427 323 51 6 chr13 115551507 115551663 -4732649 - MIRb SINE MIR -81 187 25 7 1466 327 146 0 0 chr13 115551879 115551934 -4732378 + (CAT)n Simple_repeat Simple_repeat 2 56 0 7 1466 600 84 0 0 chr13 115554004 115554087 -4730225 + (TTTC)n Simple_repeat Simple_repeat 2 84 0 7 1466 32 43 0 0 chr13 115555094 115555140 -4729172 + AT_rich Low_complexity Low_complexity 1 46 0 7 1466 1178 55 0 0 chr13 115555313 115555459 -4728853 - B1_Mus1 SINE Alu -1 147 2 8 1466 411 315 59 40 chr13 115555515 115555667 -4728645 - RSINE1 SINE B4 -6 159 5 8 1466 336 262 68 18 chr13 115555677 115555840 -4728472 - L1MB3 LINE L1 -2 6181 6011 8 1466 2488 194 35 27 chr13 115555841 115556356 -4727956 + RLTR20B2 LTR ERVK 1 519 -41 8 1466 1025 271 101 68 chr13 115556444 115556612 -4727700 - L1MB3 LINE L1 -312 5871 5693 8 1466 993 237 105 155 chr13 115556612 115557011 -4727301 + MTE2b LTR MaLR 1 379 0 8 1466 1025 271 101 68 chr13 115557011 115557118 -4727194 - L1MB3 LINE L1 -491 5692 5599 8 1466 198 0 0 0 chr13 115557118 115557140 -4727172 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 8 1466 1025 260 102 60 chr13 115557140 115557686 -4726626 - L1MB3 LINE L1 -585 5598 5015 8 1466 229 97 55 14 chr13 115557757 115557830 -4726482 + (TTTG)n Simple_repeat Simple_repeat 1 76 0 8 1466 1447 281 96 20 chr13 115557845 115557972 -4726340 - L1MB3 LINE L1 -1162 4981 4850 8 1466 5063 112 25 13 chr13 115557972 115558680 -4725632 - Lx LINE L1 -5 6649 5933 8 1466 1447 275 107 17 chr13 115558680 115559277 -4725035 - L1MB3 LINE L1 -1291 4849 4189 8 1466 659 298 103 12 chr13 115559283 115559613 -4724699 + MER20B DNA MER1_type 384 743 -40 8 1466 25 31 0 0 chr13 115559620 115559652 -4724660 + AT_rich Low_complexity Low_complexity 1 32 0 8 1466 21 0 0 0 chr13 115559856 115559877 -4724435 + AT_rich Low_complexity Low_complexity 1 21 0 9 1466 248 262 112 0 chr13 115560001 115560081 -4724231 - MLT1A1 LTR MaLR -317 91 3 9 1466 703 221 36 0 chr13 115560193 115560248 -4724064 - B1_Mm SINE Alu 0 147 89 9 1466 608 0 14 0 chr13 115560248 115560320 -4723992 + (TC)n Simple_repeat Simple_repeat 2 74 0 9 1466 703 221 36 0 chr13 115560320 115560404 -4723908 - B1_Mm SINE Alu -59 88 4 9 1466 473 280 103 20 chr13 115560500 115560646 -4723666 - RSINE1 SINE B4 -4 161 4 9 1466 271 0 0 49 chr13 115560714 115560755 -4723557 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 9 1466 567 369 55 23 chr13 115560946 115561165 -4723147 + LTR16A LTR ERVL 152 377 -74 9 1466 584 201 79 0 chr13 115561596 115561760 -4722552 - MMAR1 DNA Mariner -7 1279 1103 9 1466 1947 164 3 3 chr13 115562151 115562470 -4721842 - ORR1A2 LTR MaLR -8 319 1 9 1466 215 31 0 30 chr13 115565340 115565373 -4718939 + (CAAAA)n Simple_repeat Simple_repeat 1 32 0 9 1466 1463 226 91 6 chr13 115565859 115566198 -4718114 + ORR1D1 LTR MaLR 3 370 -4 1 1466 3239 78 0 10 chr13 115569599 115569999 -4714313 + MTA_Mm LTR MaLR 1 396 0 1 1466 294 29 0 0 chr13 115571184 115571219 -4713093 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1466 192 71 0 0 chr13 115571219 115571241 -4713071 + (TA)n Simple_repeat Simple_repeat 2 23 0 1 1466 479 283 2 0 chr13 115571294 115571404 -4712908 + B1_Mur1 SINE Alu 2 112 -37 1 1466 1641 101 9 0 chr13 115571734 115571961 -4712351 + Lx4A LINE L1 6151 6379 -679 1 1466 407 85 0 33 chr13 115571962 115572023 -4712289 + B1_Mus2 SINE Alu 1 59 -88 1 1466 213 6 5 155 chr13 115572062 115572268 -4712044 + GA-rich Low_complexity Low_complexity 3 177 0 1 1466 720 85 0 36 chr13 115572330 115572440 -4711872 + B1_Mm SINE Alu 42 147 0 1 1466 207 118 14 68 chr13 115572440 115572513 -4711799 + A-rich Low_complexity Low_complexity 4 72 0 1 1466 4144 133 34 50 chr13 115572513 115572727 -4711585 + Lx4A LINE L1 6372 6600 -458 1 1466 3134 83 5 12 chr13 115572727 115573130 -4711182 + MTB LTR MaLR 1 400 0 1 1466 4144 133 34 50 chr13 115573130 115573602 -4710710 + Lx4A LINE L1 6601 7047 -11 1 1466 303 338 107 50 chr13 115573633 115573970 -4710342 - L2a LINE L2 -141 3285 2930 1 1466 402 313 23 0 chr13 115574117 115574248 -4710064 - MLT1H LTR MaLR 0 549 416 1 1466 526 124 31 0 chr13 115574315 115574412 -4709900 + C-rich Low_complexity Low_complexity 3 102 0 1 1466 311 320 108 73 chr13 115574638 115574952 -4709360 + MLT1J LTR MaLR 115 439 -73 1 1466 1167 60 0 0 chr13 115575390 115575541 -4708771 + B2_Mm2 SINE B2 3 153 -42 1 1466 214 29 57 0 chr13 115575541 115575576 -4708736 + (CATA)n Simple_repeat Simple_repeat 4 40 0 1 1466 29 47 0 0 chr13 115576256 115576299 -4708013 + AT_rich Low_complexity Low_complexity 1 43 0 1 1466 945 71 0 0 chr13 115576487 115576613 -4707699 + (GAAA)n Simple_repeat Simple_repeat 3 128 0 1 1466 504 0 0 0 chr13 115576694 115576750 -4707562 + (TC)n Simple_repeat Simple_repeat 1 56 0 1 1466 549 325 115 31 chr13 115577311 115577967 -4706345 - L2a LINE L2 -5 3421 2689 1 1466 470 318 28 0 chr13 115577978 115578157 -4706155 + Lx9 LINE L1 7307 7490 -154 1 1466 853 283 73 4 chr13 115578955 115579214 -4705098 + MER102b DNA MER1_type 1 277 -64 1 1466 277 311 0 39 chr13 115580310 115580387 -4703925 - ID2 SINE ID -7 76 3 1 1466 490 264 30 15 chr13 115580400 115580531 -4703781 - B1F1 SINE Alu -5 144 12 1 1466 460 252 97 0 chr13 115581613 115581716 -4702596 - B1F SINE Alu -36 113 1 1 1466 21 0 0 0 chr13 115583763 115583784 -4700528 + AT_rich Low_complexity Low_complexity 1 21 0 1 1466 2808 123 108 5 chr13 115583943 115584376 -4699936 - Lx4A LINE L1 -2 7056 6579 1 1466 383 247 38 31 chr13 115584385 115584544 -4699768 - Lx9 LINE L1 -1 7643 7484 1 1466 1086 239 76 36 chr13 115584575 115584905 -4699407 + Lx9 LINE L1 7005 7347 -297 1 1466 2042 249 106 44 chr13 115585397 115586430 -4697882 + RMER1A Other Other 19 728 -302 1 1466 3284 97 104 11 chr13 115586446 115586977 -4697335 + ORR1A2-int LTR MaLR 1384 1963 0 1 1466 2635 92 3 0 chr13 115586977 115587303 -4697009 + ORR1A2 LTR MaLR 1 327 0 1 1466 1577 117 125 21 chr13 115587303 115587465 -4696847 + RMER1A Other Other 711 900 -130 1 1466 202 29 28 28 chr13 115587465 115587501 -4696811 + (TTG)n Simple_repeat Simple_repeat 2 37 0 1 1466 1577 117 125 21 chr13 115587501 115587626 -4696686 + RMER1A Other Other 901 1028 -2 1 1466 226 197 16 32 chr13 115587629 115587692 -4696620 + GA-rich Low_complexity Low_complexity 4 65 0 1 1466 3708 239 82 19 chr13 115587871 115588857 -4695455 + Lx7 LINE L1 6420 7467 -229 1 1466 773 257 21 42 chr13 115588995 115589149 -4695163 + ORR1D1 LTR MaLR 6 163 -211 1 1466 456 67 0 0 chr13 115589149 115589209 -4695103 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 1 1466 773 257 21 42 chr13 115589209 115589245 -4695067 + ORR1D1 LTR MaLR 164 192 -182 1 1466 799 250 127 37 chr13 115589249 115589661 -4694651 - Lx8 LINE L1 -6 7467 6992 1 1466 3657 29 12 2 chr13 115589661 115590074 -4694238 - L1Md_F3 LINE L1 0 6584 6168 1 1466 7359 43 2 1 chr13 115590074 115591257 -4693055 + L1Md_F3 LINE L1 4977 6160 -424 1 1466 1053 269 67 13 chr13 115591252 115591550 -4692762 - Lx8 LINE L1 -455 7018 6705 1 1466 877 163 62 4 chr13 115591550 115591725 -4692587 + ORR1B1 LTR MaLR 3 179 -215 1 1466 264 59 0 0 chr13 115591725 115591759 -4692553 + (CCTG)n Simple_repeat Simple_repeat 2 35 0 1 1466 815 195 99 83 chr13 115591759 115591835 -4692477 + ORR1B1 LTR MaLR 175 258 -120 1 1466 632 108 8 23 chr13 115591848 115591981 -4692331 + (TCTG)n Simple_repeat Simple_repeat 2 132 0 1 1466 993 212 14 18 chr13 115591981 115592202 -4692110 + ORR1C1 LTR MaLR 159 378 0 1 1466 5183 204 129 30 chr13 115592202 115592796 -4691516 + ORR1C1-int LTR MaLR 1 665 -705 1 1466 782 183 42 14 chr13 115592796 115592940 -4691372 + B1_Mur3 SINE Alu 2 149 0 1 1466 5183 204 129 30 chr13 115592940 115593592 -4690720 + ORR1C1-int LTR MaLR 666 1370 0 1 1466 1875 209 55 11 chr13 115593592 115593954 -4690358 + ORR1C1 LTR MaLR 1 378 0 1 1466 1005 287 29 0 chr13 115593976 115594251 -4690061 - Lx8 LINE L1 -808 6665 6383 1 1466 699 296 159 48 chr13 115594260 115594952 -4689360 - Lx8 LINE L1 -1213 6260 5492 1 1466 390 365 18 14 chr13 115595040 115595326 -4688986 + L1MEc LINE L1 15 301 -6099 1 1466 359 41 0 20 chr13 115595423 115595473 -4688839 + (TG)n Simple_repeat Simple_repeat 1 49 0 1 1466 323 191 51 68 chr13 115595653 115595771 -4688541 + L1MEc LINE L1 713 828 -5572 1 1466 492 291 84 24 chr13 115595783 115596056 -4688256 - ORR1E LTR MaLR -5 354 1 1 1466 384 294 20 27 chr13 115596165 115596312 -4688000 + L1MEc LINE L1 1041 1186 -5214 1 1466 339 65 0 0 chr13 115596314 115596360 -4687952 + (GGAA)n Simple_repeat Simple_repeat 4 49 0 1 1466 310 288 60 86 chr13 115596360 115596592 -4687720 + L1MEc LINE L1 1173 1398 -5002 1 1466 1994 160 8 61 chr13 115596596 115596975 -4687337 + RLTR15 LTR ERVK 1 359 0 1 1466 204 40 0 0 chr13 115597041 115597066 -4687246 + (TGG)n Simple_repeat Simple_repeat 2 26 0 1 1466 316 269 0 37 chr13 115597615 115597696 -4686616 + B1_Mm SINE Alu 32 109 -38 1 1466 1039 199 127 36 chr13 115597791 115598098 -4686214 + MYSERV6-int LTR ERVK 6393 6727 -2232 1 1466 638 197 7 81 chr13 115598091 115598240 -4686072 + RLTR18-int LTR ERVK 4720 4857 -504 1 1466 561 214 13 28 chr13 115598434 115598571 -4685741 + B1_Mur3 SINE Alu 13 149 0 1 1466 431 254 24 24 chr13 115598764 115598889 -4685423 + MYSERV-int LTR ERVK 4279 4403 -2147 1 1466 1104 172 62 37 chr13 115598891 115599132 -4685180 + RLTR11B LTR ERVK 207 453 0 1 1466 788 246 113 94 chr13 115599452 115599717 -4684595 - MTD LTR MaLR -14 405 136 1 1466 289 247 0 11 chr13 115599873 115599963 -4684349 - Tigger7 DNA MER2_type -152 2339 2251 1 1466 524 301 157 40 chr13 115599994 115600243 -4684069 - Tigger7 DNA MER2_type -2203 288 11 1 1466 15664 15 0 0 chr13 115600520 115602999 -4681313 - L1Md_T LINE L1 0 6582 4104 1 1466 257 371 28 14 chr13 115603103 115603245 -4681067 + MER58A DNA MER1_type 80 223 -1 1 1466 393 292 22 104 chr13 115603385 115603519 -4680793 - MER2B DNA MER2_type 0 336 214 1 1466 591 302 110 58 chr13 115603535 115603616 -4680696 - MLT1A0 LTR MaLR -31 334 240 1 1466 2791 88 29 36 chr13 115603616 115604030 -4680282 + IAPLTR2a LTR ERVK 1 411 0 1 1466 591 302 110 58 chr13 115604030 115604257 -4680055 - MLT1A0 LTR MaLR -126 239 10 1 1466 339 194 0 30 chr13 115604737 115604838 -4679474 + CT-rich Low_complexity Low_complexity 1 98 0 1 1467 874 235 137 70 chr13 115605908 115606288 -4678024 - MTE2a LTR MaLR -14 382 1 1 1467 21 0 0 0 chr13 115606864 115606885 -4677427 + AT_rich Low_complexity Low_complexity 1 21 0 1 1467 367 149 8 58 chr13 115607321 115607450 -4676862 - B3 SINE B2 -5 211 9 1 1467 920 143 7 20 chr13 115609306 115609456 -4674856 - B1_Mur4 SINE Alu -1 149 2 1 1467 1140 172 22 31 chr13 115610282 115610510 -4673802 + URR1A DNA MER1_type 1 226 0 1 1467 837 261 95 12 chr13 115611442 115611694 -4672618 + B4A SINE B4 1 273 -19 1 1467 231 114 0 0 chr13 115611723 115611758 -4672554 + (CA)n Simple_repeat Simple_repeat 2 36 0 1 1467 973 178 91 0 chr13 115612699 115612896 -4671416 + URR1A DNA MER1_type 10 224 -2 1 1467 264 59 39 19 chr13 115613010 115613062 -4671250 + (TTTTTG)n Simple_repeat Simple_repeat 2 54 0 1 1467 582 294 30 30 chr13 115613484 115613649 -4670663 - RSINE1 SINE B4 0 165 1 1 1467 1621 199 123 46 chr13 115613763 115614152 -4670160 - MTD LTR MaLR 0 419 1 1 1467 239 133 22 0 chr13 115616242 115616287 -4668025 + (TA)n Simple_repeat Simple_repeat 1 46 0 1 1467 534 58 35 0 chr13 115616652 115616739 -4667573 + (TA)n Simple_repeat Simple_repeat 2 91 0 1 1467 436 264 78 0 chr13 115619286 115619415 -4664897 - L1MA9 LINE L1 -2 6310 6172 1 1467 815 113 0 0 chr13 115619472 115619587 -4664725 + B3 SINE B2 2 116 -100 1 1467 238 222 37 12 chr13 115619597 115619679 -4664633 + (TA)n Simple_repeat Simple_repeat 2 85 0 1 1467 522 225 133 0 chr13 115620279 115620399 -4663913 + B1_Mur3 SINE Alu 1 136 -13 1 1467 269 26 0 26 chr13 115620399 115620438 -4663874 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 1 1467 213 99 37 65 chr13 115622152 115622260 -4662052 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 1 1467 269 68 23 0 chr13 115622264 115622308 -4662004 + (TAA)n Simple_repeat Simple_repeat 1 45 0 1 1467 36 70 0 0 chr13 115622314 115622385 -4661927 + AT_rich Low_complexity Low_complexity 1 71 0 1 1467 276 30 0 0 chr13 115622642 115622675 -4661637 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1 1467 233 233 123 28 chr13 115622682 115622788 -4661524 + Lx7 LINE L1 7578 7693 -3 1 1467 399 353 97 7 chr13 115624358 115624512 -4659800 + MER20 DNA MER1_type 34 201 -18 1 1467 285 29 0 0 chr13 115624595 115624629 -4659683 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1467 387 0 0 0 chr13 115625568 115625611 -4658701 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1467 434 244 76 34 chr13 115625891 115626010 -4658302 - B1F SINE Alu -1 148 25 1 1467 231 88 0 0 chr13 115626195 115626229 -4658083 + (CATATA)n Simple_repeat Simple_repeat 3 36 0 1 1467 213 136 91 0 chr13 115626253 115626319 -4657993 + (TA)n Simple_repeat Simple_repeat 1 72 0 1 1467 471 266 178 29 chr13 115630888 115631062 -4653250 + B3 SINE B2 6 205 -11 1 1467 801 206 30 55 chr13 115631992 115632192 -4652120 - B2_Mm2 SINE B2 0 195 1 1 1467 4141 51 2 4 chr13 115632232 115632722 -4651590 - L1Md_F2 LINE L1 0 6582 6094 1 1467 200 206 0 0 chr13 115633755 115633789 -4650523 + polypurine Low_complexity Low_complexity 3 36 0 1 1467 1130 192 51 0 chr13 115633882 115634096 -4650216 - URR1B DNA MER1_type 0 225 1 1 1467 669 333 66 33 chr13 115634417 115634780 -4649532 + L1MC1 LINE L1 5958 6332 -1 1 1467 818 268 34 34 chr13 115634790 115635029 -4649283 + B4A SINE B4 1 239 -53 2 1467 1089 96 0 0 chr13 115635135 115635291 -4649021 + (TC)n Simple_repeat Simple_repeat 1 156 0 2 1467 366 23 0 0 chr13 115635293 115635336 -4648976 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1467 1505 139 9 9 chr13 115635717 115635942 -4648370 - URR1B DNA MER1_type 0 225 1 2 1467 1298 283 70 33 chr13 115636433 115636993 -4647319 + Lx6 LINE L1 6506 7434 -26 2 1467 310 150 33 16 chr13 115637047 115637108 -4647204 + 4.5SRNA scRNA scRNA 25 86 -8 2 1467 401 58 0 0 chr13 115637057 115637109 -4647203 + B1_Mus1 SINE Alu 40 91 -57 2 1467 298 279 81 52 chr13 115637258 115637394 -4646918 + MLT1A1 LTR MaLR 268 407 -1 2 1467 657 110 0 0 chr13 115637428 115637528 -4646784 + (TAGA)n Simple_repeat Simple_repeat 2 101 0 2 1467 21 36 0 0 chr13 115638536 115638564 -4645748 + AT_rich Low_complexity Low_complexity 1 28 0 2 1467 328 241 51 0 chr13 115638833 115638912 -4645400 - PB1D7 SINE Alu -20 100 18 2 1467 382 296 26 19 chr13 115639272 115639427 -4644885 + MER5A DNA MER1_type 32 187 -2 2 1467 207 0 0 0 chr13 115640407 115640430 -4643882 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1467 1252 54 7 0 chr13 115640437 115640584 -4643728 - B1_Mus1 SINE Alu 0 148 1 2 1467 597 28 0 0 chr13 115641185 115641256 -4643056 + (TTTC)n Simple_repeat Simple_repeat 2 72 0 2 1467 930 88 0 0 chr13 115642030 115642155 -4642157 + L1_Mus2 LINE L1 6440 6564 -2 2 1467 489 192 24 0 chr13 115642354 115642479 -4641833 + CT-rich Low_complexity Low_complexity 2 129 0 2 1467 217 93 47 0 chr13 115643311 115643354 -4640958 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 2 1467 625 171 28 17 chr13 115644750 115644928 -4639384 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1467 22 0 0 0 chr13 115644975 115644997 -4639315 + AT_rich Low_complexity Low_complexity 1 22 0 2 1467 852 63 0 0 chr13 115645253 115645364 -4638948 + (TA)n Simple_repeat Simple_repeat 2 112 0 2 1467 971 138 21 0 chr13 115645364 115645509 -4638803 - B1_Mur4 SINE Alu 0 150 3 2 1467 192 111 0 0 chr13 115646144 115646180 -4638132 + (T)n Simple_repeat Simple_repeat 1 36 0 2 1467 207 0 0 0 chr13 115646291 115646314 -4637998 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1467 185 266 11 92 chr13 115647872 115647959 -4636353 + L2 LINE L2 2216 2295 -1124 2 1467 554 192 43 14 chr13 115648118 115648472 -4635840 + (TG)n Simple_repeat Simple_repeat 1 364 0 2 1467 256 295 0 0 chr13 115648483 115648544 -4635768 + (TG)n Simple_repeat Simple_repeat 1 61 0 2 1467 902 140 21 0 chr13 115648810 115648953 -4635359 + URR1A DNA MER1_type 81 226 0 2 1467 225 0 0 0 chr13 115649138 115649163 -4635149 + (TG)n Simple_repeat Simple_repeat 2 26 0 2 1467 634 311 70 53 chr13 115649191 115649476 -4634836 - B4A SINE B4 -2 290 1 2 1467 415 0 36 0 chr13 115650081 115650136 -4634176 + (CA)n Simple_repeat Simple_repeat 2 58 0 2 1467 1061 37 8 0 chr13 115652830 115652964 -4631348 + (TCTA)n Simple_repeat Simple_repeat 2 136 0 2 1467 25 75 0 0 chr13 115654191 115654244 -4630068 + AT_rich Low_complexity Low_complexity 1 53 0 2 1467 739 317 70 67 chr13 115654461 115654652 -4629660 - B4 SINE B4 -2 290 82 2 1467 541 277 35 0 chr13 115654652 115654793 -4629519 - B1_Mur1 SINE Alu -1 148 3 2 1467 739 317 70 67 chr13 115654793 115654885 -4629427 - B4 SINE B4 -211 81 6 2 1467 210 149 88 15 chr13 115655300 115655368 -4628944 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 2 1467 287 333 38 38 chr13 115656100 115656259 -4628053 + L2a LINE L2 3256 3414 -12 2 1467 976 245 19 9 chr13 115657260 115657474 -4626838 + B3 SINE B2 1 216 0 2 1467 486 0 0 0 chr13 115658736 115658790 -4625522 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2 1467 1399 252 9 114 chr13 115659774 115660195 -4624117 + MTE2a LTR MaLR 3 379 0 2 1467 317 269 29 8 chr13 115660230 115660313 -4623999 + MIRb SINE MIR 6 87 -181 2 1467 194 62 0 30 chr13 115660616 115660649 -4623663 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2 1467 1134 181 18 18 chr13 115661006 115661225 -4623087 + URR1A DNA MER1_type 7 225 -1 2 1467 532 253 118 82 chr13 115661557 115661837 -4622475 - B4A SINE B4 -1 291 2 2 1467 1255 186 9 26 chr13 115662425 115662651 -4621661 + URR1A DNA MER1_type 5 226 0 2 1467 342 0 0 0 chr13 115663139 115663177 -4621135 + (TTAA)n Simple_repeat Simple_repeat 3 40 0 2 1467 1145 83 7 14 chr13 115663177 115663313 -4620999 - B1_Mus2 SINE Alu -10 137 1 2 1467 206 222 0 0 chr13 115663624 115663660 -4620652 + (CA)n Simple_repeat Simple_repeat 1 36 0 2 1467 279 239 15 0 chr13 115666057 115666124 -4618188 + (TG)n Simple_repeat Simple_repeat 2 69 0 2 1467 225 329 83 104 chr13 115666276 115666517 -4617795 + MLT1M LTR MaLR 26 261 -411 2 1467 399 89 0 0 chr13 115669579 115669635 -4614677 + (ATGGTG)n Simple_repeat Simple_repeat 6 61 0 2 1467 203 239 0 21 chr13 115669666 115669713 -4614599 + C-rich Low_complexity Low_complexity 4 49 0 2 1467 280 333 0 0 chr13 115669715 115669793 -4614519 - PB1 SINE Alu -18 109 32 2 1467 310 259 73 12 chr13 115670134 115670216 -4614096 - HAL1-3A_ME LINE L1 -797 2061 1975 2 1467 336 48 0 0 chr13 115670216 115670258 -4614054 + (TA)n Simple_repeat Simple_repeat 1 42 0 2 1467 458 287 163 22 chr13 115670258 115670436 -4613876 - B3 SINE B2 -13 203 1 2 1467 234 0 0 0 chr13 115670717 115670743 -4613569 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 2 1467 207 0 0 0 chr13 115671359 115671382 -4612930 + (TG)n Simple_repeat Simple_repeat 1 23 0 2 1467 462 182 0 0 chr13 115671450 115671527 -4612785 - B3 SINE B2 -139 77 1 2 1467 973 239 0 11 chr13 115671573 115671751 -4612561 + B3 SINE B2 3 178 -38 2 1467 513 0 0 0 chr13 115672723 115672780 -4611532 + (CAGAGA)n Simple_repeat Simple_repeat 4 60 0 2 1467 354 23 0 0 chr13 115673056 115673099 -4611213 + (CA)n Simple_repeat Simple_repeat 2 44 0 2 1467 1086 139 107 10 chr13 115673819 115674015 -4610297 - URR1A DNA MER1_type -11 215 1 2 1467 210 105 0 0 chr13 115675061 115675099 -4609213 + (A)n Simple_repeat Simple_repeat 1 38 0 2 1467 26 0 0 0 chr13 115675147 115675173 -4609139 + AT_rich Low_complexity Low_complexity 1 26 0 2 1467 225 292 80 40 chr13 115676246 115676321 -4607991 - ID4_ SINE ID 0 83 6 2 1467 216 216 38 38 chr13 115676461 115676514 -4607798 - MIRm SINE MIR -2 274 222 2 1467 560 291 82 25 chr13 115677155 115677437 -4606875 - MER33 DNA MER1_type -20 304 7 2 1467 556 238 226 34 chr13 115677856 115678095 -4606217 - B4 SINE B4 -7 285 1 2 1467 23 0 0 0 chr13 115679177 115679200 -4605112 + AT_rich Low_complexity Low_complexity 1 23 0 2 1467 368 45 0 0 chr13 115679313 115679357 -4604955 + (CA)n Simple_repeat Simple_repeat 2 45 0 2 1467 604 170 19 12 chr13 115679357 115679518 -4604794 + (TA)n Simple_repeat Simple_repeat 2 163 0 2 1467 1596 284 75 34 chr13 115679643 115680258 -4604054 - Lx8 LINE L1 -9 7464 6825 2 1467 1272 236 100 15 chr13 115680275 115680614 -4603698 + MTEb LTR MaLR 6 373 -6 2 1467 203 306 79 54 chr13 115680738 115680910 -4603402 - MIR3 SINE MIR -70 192 13 2 1467 678 241 6 12 chr13 115680925 115681097 -4603215 + Lx8 LINE L1 7006 7176 -297 2 1467 209 321 173 0 chr13 115682720 115682801 -4601511 - MER91C DNA Tip100 -37 103 9 2 1467 2404 134 40 2 chr13 115682818 115683214 -4601098 - MTC LTR MaLR -4 417 7 2 1467 213 304 135 19 chr13 115683218 115683322 -4600990 - L2a LINE L2 -29 3397 3282 2 1467 414 0 0 0 chr13 115683412 115683458 -4600854 + (CA)n Simple_repeat Simple_repeat 2 47 0 2 1467 383 328 96 38 chr13 115683553 115683636 -4600676 - L2a LINE L2 -455 2964 2880 2 1467 342 0 0 0 chr13 115683636 115683674 -4600638 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2 1467 383 328 96 38 chr13 115683674 115683935 -4600377 - L2a LINE L2 -540 2879 2601 2 1467 203 280 40 13 chr13 115684867 115684943 -4599369 - MIRc SINE MIR -21 247 170 2 1467 1226 276 100 18 chr13 115684989 115685328 -4598984 + ORR1D2 LTR MaLR 1 367 -3 2 1467 405 0 0 0 chr13 115685711 115685756 -4598556 + (TG)n Simple_repeat Simple_repeat 2 46 0 2 1467 588 95 0 0 chr13 115686829 115686913 -4597399 + (CGTG)n Simple_repeat Simple_repeat 1 84 0 2 1467 519 277 81 102 chr13 115688394 115688591 -4595721 - B3A SINE B2 -2 193 1 2 1467 201 196 20 0 chr13 115689381 115689432 -4594880 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1467 2459 146 35 12 chr13 115689555 115689956 -4594356 + MTC LTR MaLR 12 421 0 2 1467 282 259 24 24 chr13 115690417 115690500 -4593812 + PB1D9 SINE Alu 30 112 -8 2 1467 220 290 44 88 chr13 115690874 115691010 -4593302 - MIRb SINE MIR 0 268 139 2 1467 221 0 0 33 chr13 115692394 115692424 -4591888 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2 1467 596 274 36 59 chr13 115692890 115693111 -4591201 + B3A SINE B2 1 216 0 2 1467 998 199 397 22 chr13 115693813 115694085 -4590227 - ORR1D1 LTR MaLR 0 374 1 2 1467 197 248 172 60 chr13 115694435 115694551 -4589761 + MIRm SINE MIR 25 153 -123 2 1467 1368 254 38 89 chr13 115694779 115695172 -4589140 + MTE2b LTR MaLR 5 377 -2 2 1467 573 321 0 0 chr13 115695244 115695375 -4588937 - B3A SINE B2 -42 156 26 2 1467 186 133 0 0 chr13 115695405 115695435 -4588877 + (TA)n Simple_repeat Simple_repeat 1 30 0 2 1467 242 153 56 0 chr13 115695555 115695627 -4588685 + (TA)n Simple_repeat Simple_repeat 1 76 0 2 1467 4580 60 46 7 chr13 115695627 115696197 -4588115 - L1Md_F2 LINE L1 -3 6579 5988 2 1467 4389 43 2 0 chr13 115696197 115696830 -4587482 + L1Md_F2 LINE L1 5361 5994 -588 2 1467 328 224 60 6 chr13 115696842 115697008 -4587304 + (TA)n Simple_repeat Simple_repeat 1 175 0 2 1467 182 91 0 29 chr13 115697010 115697044 -4587268 + (TATAA)n Simple_repeat Simple_repeat 5 37 0 2 1467 572 307 40 6 chr13 115697396 115697573 -4586739 + B3A SINE B2 1 183 -15 3 1467 427 304 163 72 chr13 115698043 115698447 -4585865 - MLT1C LTR MaLR 0 467 27 3 1467 504 324 44 40 chr13 115698640 115698891 -4585421 - MLT1C-int LTR MaLR -511 860 609 3 1467 385 333 46 118 chr13 115698956 115699205 -4585107 - MLT1C LTR MaLR -73 292 66 3 1467 577 76 22 0 chr13 115699205 115699297 -4585015 + (CA)n Simple_repeat Simple_repeat 1 94 0 3 1467 385 333 46 118 chr13 115699297 115699353 -4584959 - MLT1C LTR MaLR -300 65 9 3 1467 471 231 187 0 chr13 115699567 115699701 -4584611 - MTD LTR MaLR -8 411 253 3 1467 368 346 108 38 chr13 115699760 115700048 -4584264 + LTR40b LTR ERVL 75 382 -80 3 1467 347 0 23 0 chr13 115700373 115700416 -4583896 + (CA)n Simple_repeat Simple_repeat 1 44 0 3 1467 400 263 67 86 chr13 115700416 115700607 -4583705 + MLT1B LTR MaLR 197 502 -3 3 1467 1122 99 7 14 chr13 115700745 115701029 -4583283 + (TG)n Simple_repeat Simple_repeat 1 281 0 3 1467 392 209 27 0 chr13 115701633 115701743 -4582569 - Lx7 LINE L1 -5 7691 7579 3 1467 575 150 46 75 chr13 115701750 115701923 -4582389 - Lx9 LINE L1 0 7644 7477 3 1467 195 162 0 0 chr13 115701924 115701961 -4582351 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 3 1467 267 172 99 79 chr13 115701964 115702051 -4582261 - Lx9 LINE L1 -121 7523 7433 3 1467 188 111 28 0 chr13 115702051 115702087 -4582225 + (TG)n Simple_repeat Simple_repeat 2 38 0 3 1467 267 172 99 79 chr13 115702087 115702100 -4582212 - Lx9 LINE L1 -212 7432 7421 3 1467 484 174 26 6 chr13 115702103 115702259 -4582053 + (TG)n Simple_repeat Simple_repeat 1 159 0 3 1467 767 227 40 10 chr13 115702259 115702459 -4581853 - Lx9 LINE L1 -213 7431 7226 3 1467 1379 179 9 0 chr13 115702581 115702804 -4581508 - URR1B DNA MER1_type 0 225 1 3 1467 326 286 48 15 chr13 115703125 115703277 -4581035 + MLT1E1A LTR MaLR 322 603 -77 3 1467 251 292 289 19 chr13 115703472 115703943 -4580369 - Arthur1 DNA Tip100 -15 3932 3335 3 1467 472 259 99 76 chr13 115704374 115704473 -4579839 + CYRA11_Mm Unknown Y-chromosome 70 174 -443 3 1467 1049 137 145 15 chr13 115704473 115704673 -4579639 - URR1A DNA MER1_type 0 226 1 3 1467 211 242 16 0 chr13 115705841 115705903 -4578409 + (TAAA)n Simple_repeat Simple_repeat 1 63 0 3 1467 444 192 142 0 chr13 115706137 115706257 -4578055 + MER20 DNA MER1_type 29 165 -54 3 1467 186 71 0 0 chr13 115706258 115706286 -4578026 + (CCCCCA)n Simple_repeat Simple_repeat 1 28 0 3 1467 424 282 68 110 chr13 115706563 115706782 -4577530 - B3A SINE B2 0 216 7 3 1467 357 24 0 0 chr13 115707259 115707301 -4577011 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1467 411 21 0 0 chr13 115707372 115707420 -4576892 + (TA)n Simple_repeat Simple_repeat 2 49 0 3 1467 582 160 23 12 chr13 115707704 115707875 -4576437 + (CA)n Simple_repeat Simple_repeat 1 173 0 3 1467 390 317 76 155 chr13 115708052 115708202 -4576110 + MER82 DNA MER2_type 244 395 -258 3 1467 477 0 0 0 chr13 115708202 115708255 -4576057 + (CA)n Simple_repeat Simple_repeat 2 54 0 3 1467 390 317 76 155 chr13 115708255 115708485 -4575827 + MER82 DNA MER2_type 396 594 -59 3 1467 309 318 121 0 chr13 115708602 115708734 -4575578 + Tigger7 DNA MER2_type 158 305 -2186 3 1467 450 286 115 6 chr13 115708734 115708917 -4575395 + Tigger7 DNA MER2_type 2135 2337 -154 3 1467 375 268 44 9 chr13 115709055 115709168 -4575144 + Tigger7 DNA MER2_type 2347 2463 -28 3 1467 2927 30 48 0 chr13 115709780 115710110 -4574202 - ORR1A1 LTR MaLR 0 346 1 3 1467 2137 162 46 30 chr13 115710252 115710620 -4573692 + ORR1D1 LTR MaLR 1 374 0 3 1467 429 222 22 0 chr13 115710927 115711017 -4573295 + B2_Mm2 SINE B2 3 94 -101 3 1467 351 0 0 0 chr13 115711033 115711072 -4573240 + (CA)n Simple_repeat Simple_repeat 2 40 0 3 1467 305 296 12 58 chr13 115711153 115711239 -4573073 - RSINE1 SINE B4 -2 163 82 3 1467 373 271 121 86 chr13 115711243 115711441 -4572871 - B4A SINE B4 -77 215 11 3 1467 323 281 71 33 chr13 115711634 115711844 -4572468 + L1M5 LINE L1 3816 4033 -2113 3 1467 207 88 0 0 chr13 115712022 115712056 -4572256 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 3 1467 213 197 0 0 chr13 115712159 115712225 -4572087 + (TG)n Simple_repeat Simple_repeat 1 66 0 3 1467 440 250 49 42 chr13 115712642 115712784 -4571528 + RSINE1 SINE B4 1 143 -22 3 1467 749 189 0 6 chr13 115712989 115713154 -4571158 + GA-rich Low_complexity Low_complexity 1 164 0 3 1467 674 326 10 47 chr13 115714303 115714599 -4569713 + B4A SINE B4 2 286 -6 3 1467 218 81 0 26 chr13 115714625 115714663 -4569649 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1467 978 144 203 0 chr13 115714894 115715081 -4569231 + URR1B DNA MER1_type 1 225 0 3 1467 648 0 0 0 chr13 115715344 115715416 -4568896 + (TC)n Simple_repeat Simple_repeat 1 72 0 3 1467 266 358 19 44 chr13 115716512 115716670 -4567642 - MLT1L LTR MaLR -91 519 366 3 1467 4179 60 0 0 chr13 115718363 115718877 -4565435 - L1_Mus1 LINE L1 -389 6178 5665 3 1467 2942 61 0 0 chr13 115718877 115719256 -4565056 + L1_Mus1 LINE L1 6213 6567 0 3 1467 1224 56 0 0 chr13 115720954 115721097 -4563215 + B1_Mm SINE Alu 5 147 0 3 1467 465 71 0 0 chr13 115721849 115721919 -4562393 + (TG)n Simple_repeat Simple_repeat 2 71 0 3 1467 844 169 177 45 chr13 115722935 115723133 -4561179 - URR1B DNA MER1_type 0 225 2 3 1467 508 284 20 54 chr13 115723584 115723733 -4560579 - B4 SINE B4 0 292 149 3 1467 520 265 82 12 chr13 115724443 115724699 -4559613 - Charlie1a DNA MER1_type -98 1357 1084 3 1467 278 247 94 0 chr13 115725327 115725412 -4558900 - Charlie1a DNA MER1_type -490 965 873 3 1467 272 291 0 0 chr13 115725458 115725537 -4558775 - Charlie1a DNA MER1_type -1336 119 41 3 1467 1935 175 57 30 chr13 115725825 115726197 -4558115 + ORR1C2 LTR MaLR 3 384 0 3 1467 748 278 16 5 chr13 115726325 115726513 -4557799 + B4A SINE B4 41 230 -62 3 1467 3007 276 51 11 chr13 115726517 115727480 -4556832 + Lx8 LINE L1 3833 4833 -1047 3 1467 378 0 0 0 chr13 115727483 115727525 -4556787 + (TA)n Simple_repeat Simple_repeat 2 43 0 3 1467 2595 211 13 8 chr13 115727532 115728068 -4556244 - Lx9 LINE L1 -195 7449 6911 3 1467 1618 227 21 3 chr13 115728067 115728398 -4555914 + Lx9 LINE L1 6584 6920 -724 3 1467 1066 215 30 105 chr13 115728398 115728694 -4555618 + RLTR18B LTR ERVK 1 274 -238 3 1467 1494 234 34 96 chr13 115728695 115729111 -4555201 + RLTR18B LTR ERVK 123 512 0 3 1467 1132 318 30 40 chr13 115729351 115729820 -4554492 - Lx7 LINE L1 -396 7300 6837 3 1467 2278 307 77 42 chr13 115729811 115731125 -4553187 + Lx8 LINE L1 5480 6851 -622 3 1467 1835 259 34 14 chr13 115732188 115732682 -4551630 - RMER5 LTR ERV1 -30 504 1 3 1467 348 178 14 0 chr13 115732915 115732988 -4551324 - Lx5 LINE L1 -50 7000 6927 3 1467 1604 99 0 9 chr13 115732985 115733210 -4551102 + Lx5 LINE L1 6329 6551 -499 3 1467 387 0 0 0 chr13 115733692 115733735 -4550577 + (TG)n Simple_repeat Simple_repeat 1 43 0 3 1467 699 12 0 0 chr13 115733735 115733814 -4550498 + (GA)n Simple_repeat Simple_repeat 1 80 0 3 1467 433 291 87 156 chr13 115733822 115734111 -4550201 - B4 SINE B4 -21 271 3 3 1467 1695 106 27 78 chr13 115734574 115734870 -4549442 + ORR1A4 LTR MaLR 1 281 -48 3 1467 374 299 100 74 chr13 115734868 115734929 -4549383 - B4 SINE B4 -10 282 206 3 1467 594 0 0 0 chr13 115734929 115734995 -4549317 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1467 374 303 44 98 chr13 115734995 115735164 -4549148 - B4 SINE B4 -87 205 47 3 183 2570 217 204 22 chr13 115736492 115737218 -4547094 + RMER13A LTR ERVK 1 858 -2 3 1468 452 362 40 0 chr13 115737774 115737923 -4546389 + RSINE1 SINE B4 3 157 -8 3 1468 299 358 100 39 chr13 115738067 115738247 -4546065 - MIRc SINE MIR -75 193 3 3 1468 2278 231 135 5 chr13 115739852 115740439 -4543873 - Lx5 LINE L1 -27 7023 6361 3 1468 3218 164 38 38 chr13 115740441 115741096 -4543216 + Lx5 LINE L1 5706 6360 -690 3 1468 265 328 61 16 chr13 115741275 115741520 -4542792 - L1M4 LINE L1 -3781 2365 2110 3 1468 23 68 0 0 chr13 115741911 115741955 -4542357 + AT_rich Low_complexity Low_complexity 1 44 0 3 1468 767 364 23 4 chr13 115742061 115742323 -4541989 + B4A SINE B4 4 270 -22 3 1468 572 281 141 0 chr13 115742546 115742731 -4541581 + MER21B LTR ERV1 275 485 -378 3 1468 578 292 133 49 chr13 115742765 115743028 -4541284 + MER21B LTR ERV1 539 823 -40 3 1468 219 69 0 0 chr13 115743818 115743847 -4540465 + (T)n Simple_repeat Simple_repeat 1 29 0 3 1468 268 274 27 0 chr13 115745491 115745564 -4538748 - ID4_ SINE ID -6 77 3 3 1468 455 0 18 0 chr13 115747176 115747231 -4537081 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1468 26 0 0 0 chr13 115747880 115747906 -4536406 + AT_rich Low_complexity Low_complexity 1 26 0 3 1468 22 0 0 0 chr13 115748776 115748798 -4535514 + AT_rich Low_complexity Low_complexity 1 22 0 3 1468 223 93 47 0 chr13 115749496 115749539 -4534773 + (TA)n Simple_repeat Simple_repeat 2 46 0 3 1468 3437 70 25 9 chr13 115750857 115751304 -4533008 + L1_Mus3 LINE L1 6185 6638 0 3 1468 236 257 13 103 chr13 115751994 115752072 -4532240 - B3 SINE B2 -16 200 130 3 1468 463 294 94 52 chr13 115752961 115753248 -4531064 - MER44A DNA MER2_type -38 301 3 3 1468 1457 129 168 26 chr13 115753797 115754107 -4530205 + RLTR15 LTR ERVK 6 359 0 3 1468 235 255 0 0 chr13 115754143 115754194 -4530118 + MIRb SINE MIR 211 261 -7 3 1468 260 250 0 29 chr13 115756386 115756456 -4527856 + (CATA)n Simple_repeat Simple_repeat 4 71 0 3 1468 340 260 14 0 chr13 115756927 115757000 -4527312 + Lx8 LINE L1 7120 7193 -280 3 1468 328 254 66 0 chr13 115757046 115757168 -4527144 - Lx9 LINE L1 -4 7640 7511 3 1468 1216 61 7 0 chr13 115757808 115757955 -4526357 + B1_Mus1 SINE Alu 1 148 0 3 1468 897 107 12 25 chr13 115758867 115759030 -4525282 + (CATATA)n Simple_repeat Simple_repeat 4 164 0 3 1468 214 159 0 43 chr13 115759578 115759624 -4524688 + (TAA)n Simple_repeat Simple_repeat 2 45 0 3 1468 233 298 47 23 chr13 115760362 115760448 -4523864 + RSINE1 SINE B4 3 90 -75 3 1468 595 232 8 16 chr13 115760438 115760565 -4523747 + RSINE1 SINE B4 23 148 -17 3 1468 213 337 0 11 chr13 115760886 115760973 -4523339 + (TATG)n Simple_repeat Simple_repeat 1 86 0 3 1468 1179 236 102 21 chr13 115760982 115761307 -4523005 - RLTR40 LTR ERVK -414 403 53 3 1468 757 295 58 29 chr13 115761418 115761604 -4522708 - B4A SINE B4 -8 284 88 3 1468 648 70 0 0 chr13 115761604 115761690 -4522622 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 3 1468 757 295 58 29 chr13 115761690 115761779 -4522533 - B4A SINE B4 -205 87 1 3 1468 1663 214 89 27 chr13 115766987 115767391 -4516921 - Lx6 LINE L1 -26 7434 7006 3 1468 398 347 41 6 chr13 115768096 115768267 -4516045 + MLT1A0 LTR MaLR 1 177 -188 4 1468 1270 155 15 0 chr13 115769172 115769378 -4514934 - URR1A DNA MER1_type 0 226 18 4 1468 391 258 73 36 chr13 115769718 115769855 -4514457 + L1M4 LINE L1 4908 5049 -1097 4 1468 612 216 16 0 chr13 115769959 115770084 -4514228 + B1F SINE Alu 13 139 -10 4 1468 210 250 0 0 chr13 115770131 115770171 -4514141 + (CATG)n Simple_repeat Simple_repeat 1 40 0 4 1468 300 250 0 91 chr13 115770173 115770261 -4514051 + L1MD LINE L1 5384 5463 -896 4 1468 215 61 0 29 chr13 115770262 115770296 -4514016 + (CAA)n Simple_repeat Simple_repeat 1 33 0 4 1468 269 272 20 89 chr13 115770379 115770480 -4513832 - MLT1A0 LTR MaLR 0 365 272 4 1468 372 224 44 61 chr13 115770547 115770661 -4513651 - MLT1A0 LTR MaLR -294 114 3 4 1468 1278 165 27 9 chr13 115770713 115770933 -4513379 + URR1A DNA MER1_type 3 226 0 4 1468 180 184 0 0 chr13 115771295 115771344 -4512968 + G-rich Low_complexity Low_complexity 1 49 0 4 1468 429 20 0 0 chr13 115771890 115771940 -4512372 + (TG)n Simple_repeat Simple_repeat 1 50 0 4 1468 21 0 0 0 chr13 115772257 115772278 -4512034 + AT_rich Low_complexity Low_complexity 1 21 0 4 1468 701 198 23 80 chr13 115772580 115772775 -4511537 + B3 SINE B2 2 184 -11 4 1468 195 333 15 15 chr13 115774015 115774082 -4510230 + L2b LINE L2 3105 3171 -204 4 1468 407 262 177 35 chr13 115774257 115774455 -4509857 + LTR79 LTR ERVL 27 252 -275 4 1468 1096 183 62 243 chr13 115774456 115774925 -4509387 + ORR1C2 LTR MaLR 1 384 0 4 1468 235 85 21 21 chr13 115775149 115775197 -4509115 + (TC)n Simple_repeat Simple_repeat 1 48 0 4 1468 21 0 0 0 chr13 115777020 115777041 -4507271 + AT_rich Low_complexity Low_complexity 1 21 0 4 1468 355 326 54 0 chr13 115778466 115778595 -4505717 + Tigger7 DNA MER2_type 83 218 -2273 4 1468 574 327 43 52 chr13 115778663 115778880 -4505432 - B4A SINE B4 0 292 78 4 1468 1302 262 134 31 chr13 115778880 115779364 -4504948 + RMER5 LTR ERV1 1 534 0 4 1468 283 197 45 0 chr13 115779370 115779436 -4504876 - B4A SINE B4 -223 69 1 4 1468 468 0 0 0 chr13 115780554 115780606 -4503706 + (TA)n Simple_repeat Simple_repeat 1 52 0 4 1468 24 53 0 0 chr13 115782048 115782086 -4502226 + AT_rich Low_complexity Low_complexity 1 38 0 4 1468 777 76 0 0 chr13 115783171 115783276 -4501036 + (GA)n Simple_repeat Simple_repeat 2 106 0 4 1468 201 170 0 54 chr13 115783368 115783424 -4500888 + (CAAA)n Simple_repeat Simple_repeat 1 53 0 4 1468 515 257 9 0 chr13 115784862 115784967 -4499345 - PB1D7 SINE Alu -10 110 5 4 1468 22 0 0 0 chr13 115785246 115785268 -4499044 + AT_rich Low_complexity Low_complexity 1 22 0 4 1468 240 111 0 0 chr13 115785273 115785309 -4499003 + (TAA)n Simple_repeat Simple_repeat 1 36 0 4 1468 255 31 0 0 chr13 115785545 115785577 -4498735 + (TTTAA)n Simple_repeat Simple_repeat 4 35 0 4 1468 251 352 47 57 chr13 115785992 115786203 -4498109 - LTR87 LTR ERVL? -69 555 347 4 1468 278 26 0 25 chr13 115787029 115787069 -4497243 + (CAA)n Simple_repeat Simple_repeat 2 40 0 4 1468 24 0 0 0 chr13 115787365 115787389 -4496923 + AT_rich Low_complexity Low_complexity 1 24 0 4 1468 867 169 7 13 chr13 115787651 115787801 -4496511 - B1_Mur3 SINE Alu 0 149 1 4 1468 252 122 0 0 chr13 115788465 115788506 -4495806 + (T)n Simple_repeat Simple_repeat 1 41 0 4 1468 215 73 0 47 chr13 115788604 115788647 -4495665 + (TTTTG)n Simple_repeat Simple_repeat 4 44 0 4 1468 1274 35 14 0 chr13 115788652 115788797 -4495515 - B1_Mus1 SINE Alu 0 148 2 4 1468 375 23 0 0 chr13 115789232 115789276 -4495036 + (TTA)n Simple_repeat Simple_repeat 3 46 0 4 1468 1410 82 16 5 chr13 115789276 115789451 -4494861 - B2_Mm2 SINE B2 -16 179 2 4 1468 21 0 0 0 chr13 115790484 115790505 -4493807 + AT_rich Low_complexity Low_complexity 1 21 0 4 1468 683 329 96 62 chr13 115790764 115791231 -4493081 - MLT1D LTR MaLR 0 505 23 4 1468 377 274 23 9 chr13 115791966 115792088 -4492224 - MIR SINE MIR -18 250 114 4 1468 26 50 0 0 chr13 115793396 115793436 -4490876 + AT_rich Low_complexity Low_complexity 1 40 0 4 1468 193 118 19 19 chr13 115793754 115793806 -4490506 + C-rich Low_complexity Low_complexity 3 54 0 4 1468 702 228 48 29 chr13 115794634 115794842 -4489470 + Lx9 LINE L1 7426 7637 -7 4 1468 4488 106 29 0 chr13 115794842 115795342 -4488970 + Lx2 LINE L1 6365 6866 -131 4 1468 192 40 0 0 chr13 115795342 115795367 -4488945 + (TGGG)n Simple_repeat Simple_repeat 1 25 0 4 1468 4488 106 29 0 chr13 115795367 115795481 -4488831 + Lx2 LINE L1 6867 6995 -2 4 1468 315 308 13 13 chr13 115796020 115796099 -4488213 + ID SINE ID 2 80 -144 4 1468 516 192 0 0 chr13 115796099 115796203 -4488109 + (CA)n Simple_repeat Simple_repeat 1 104 0 4 1468 278 208 61 114 chr13 115797462 115797576 -4486736 - B3A SINE B2 0 198 91 4 1468 451 165 213 57 chr13 115797990 115798055 -4486257 - Lx4B LINE L1 0 7058 6997 4 1468 315 0 0 0 chr13 115798055 115798090 -4486222 + (CCCCCT)n Simple_repeat Simple_repeat 1 35 0 4 1468 451 165 213 57 chr13 115798090 115798165 -4486147 - Lx4B LINE L1 -62 6996 6896 4 1468 21 36 0 0 chr13 115799926 115799954 -4484358 + AT_rich Low_complexity Low_complexity 1 28 0 4 1468 372 135 0 0 chr13 115800711 115800785 -4483527 + (T)n Simple_repeat Simple_repeat 1 74 0 4 1468 189 0 0 0 chr13 115801678 115801699 -4482613 + (TA)n Simple_repeat Simple_repeat 2 22 0 4 1468 198 320 75 45 chr13 115802017 115802151 -4482161 - MIRc SINE MIR -128 140 3 4 1468 377 292 54 13 chr13 115802889 115802990 -4481322 + MER31B LTR ERV1 207 310 -156 4 1468 360 0 0 0 chr13 115802990 115803030 -4481282 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1468 377 292 54 13 chr13 115803030 115803077 -4481235 + MER31B LTR ERV1 311 360 -106 4 1468 2418 153 87 18 chr13 115803078 115803525 -4480787 + Lx5 LINE L1 6573 7050 0 4 1468 654 203 80 0 chr13 115803626 115803764 -4480548 - B1_Mur4 SINE Alu 0 150 2 4 1468 399 68 0 0 chr13 115804775 115804834 -4479478 + (GA)n Simple_repeat Simple_repeat 2 60 0 4 1468 320 64 0 21 chr13 115804828 115804876 -4479436 + (GGGGA)n Simple_repeat Simple_repeat 4 50 0 4 1468 1347 72 0 0 chr13 115804876 115805056 -4479256 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 4 1468 266 0 29 0 chr13 115805059 115805093 -4479219 + (GAGAA)n Simple_repeat Simple_repeat 1 35 0 4 1468 375 163 4 23 chr13 115805324 115805429 -4478883 + B1_Mur4 SINE Alu 50 150 0 4 1468 647 25 12 0 chr13 115805494 115805575 -4478737 + (CA)n Simple_repeat Simple_repeat 1 82 0 4 1468 414 141 22 56 chr13 115806056 115806146 -4478166 - Lx9 LINE L1 -154 7490 7404 4 1468 988 177 6 0 chr13 115806143 115806307 -4478005 + Lx9 LINE L1 7066 7230 -414 4 1468 300 238 15 31 chr13 115806879 115806944 -4477368 + tRNA-Ala-GCY_ tRNA tRNA 3 66 -9 4 1468 217 339 53 18 chr13 115806944 115806986 -4477326 + BC1_Mm scRNA scRNA 16 118 -34 4 1468 402 351 43 30 chr13 115808094 115808326 -4475986 + L2 LINE L2 1122 1356 -2063 4 1468 713 284 134 44 chr13 115808649 115808969 -4475343 + ORR1D2 LTR MaLR 1 349 -10 4 1468 296 192 29 9 chr13 115809011 115809116 -4475196 + (TCTA)n Simple_repeat Simple_repeat 2 108 0 4 1468 209 83 28 0 chr13 115809143 115809179 -4475133 + (TATG)n Simple_repeat Simple_repeat 2 38 0 4 1468 252 185 0 0 chr13 115809237 115809291 -4475021 + (TA)n Simple_repeat Simple_repeat 1 54 0 4 1468 7836 110 28 35 chr13 115809478 115810717 -4473595 + Lx3B LINE L1 5741 6971 -2 4 1468 21 0 0 0 chr13 115811256 115811277 -4473035 + AT_rich Low_complexity Low_complexity 1 21 0 4 1468 822 152 0 121 chr13 115811277 115811442 -4472870 + B1_Mur4 SINE Alu 6 150 0 4 1468 24 0 0 0 chr13 115811443 115811467 -4472845 + AT_rich Low_complexity Low_complexity 1 24 0 4 1468 454 279 0 26 chr13 115812897 115813011 -4471301 + ID_B1 SINE B4 105 215 -9 4 1468 276 77 0 0 chr13 115813027 115813066 -4471246 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 4 1468 206 234 0 0 chr13 115813256 115813303 -4471009 + GA-rich Low_complexity Low_complexity 1 47 0 4 1468 626 244 94 28 chr13 115813872 115814053 -4470259 - B3A SINE B2 -3 195 3 4 1468 517 344 46 34 chr13 115816926 115817188 -4467124 - LTR78 LTR ERV1 -636 668 404 4 1468 828 327 7 32 chr13 115817437 115817718 -4466594 - B4A SINE B4 -18 274 1 4 1468 570 298 7 14 chr13 115818923 115819066 -4465246 - B1F SINE Alu -2 147 6 4 1468 231 141 10 92 chr13 115819438 115819634 -4464678 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1468 25 75 0 0 chr13 115819634 115819687 -4464625 + AT_rich Low_complexity Low_complexity 1 53 0 4 1468 210 71 0 0 chr13 115819702 115819730 -4464582 + (TA)n Simple_repeat Simple_repeat 2 29 0 4 1468 810 185 13 27 chr13 115819952 115820102 -4464210 - B1_Mur2 SINE Alu -1 148 1 4 1468 772 192 0 0 chr13 115820616 115820741 -4463571 - B1_Mus1 SINE Alu -22 126 2 4 1468 1071 232 37 58 chr13 115822306 115822685 -4461627 - Lx7 LINE L1 -3 7693 7323 4 1468 777 178 259 0 chr13 115822802 115822976 -4461336 + Lx4B LINE L1 6269 6487 -571 4 1468 1588 239 136 46 chr13 115822983 115823394 -4460918 + RLTR20B1 LTR ERVK 20 458 -105 4 1468 414 0 0 0 chr13 115823394 115823440 -4460872 + (TG)n Simple_repeat Simple_repeat 2 47 0 4 1468 1588 239 136 46 chr13 115823440 115823527 -4460785 + RLTR20B1 LTR ERVK 459 562 -1 4 1468 1699 224 60 32 chr13 115823532 115824008 -4460304 + Lx2B LINE L1 6491 7008 0 4 1468 234 344 35 39 chr13 115824322 115824525 -4459787 + L1MEb LINE L1 272 473 -5597 4 1468 423 0 0 0 chr13 115824710 115824757 -4459555 + (TG)n Simple_repeat Simple_repeat 2 48 0 4 1468 961 251 19 5 chr13 115825910 115826122 -4458190 + B3 SINE B2 1 215 -1 4 1468 556 342 70 24 chr13 115826162 115826349 -4457963 + L1MA5 LINE L1 5594 5792 -508 4 1468 252 0 0 0 chr13 115826349 115826377 -4457935 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1468 556 342 70 24 chr13 115826377 115826530 -4457782 + L1MA5 LINE L1 5793 5950 -350 4 1468 830 312 98 11 chr13 115827595 115827952 -4456360 + L3 LINE CR1 3772 4159 -330 5 1468 347 253 0 0 chr13 115828493 115828576 -4455736 - MIR SINE MIR -1 261 179 5 1468 726 294 6 0 chr13 115829078 115829258 -4455054 + B3A SINE B2 2 182 -16 5 1468 363 276 38 0 chr13 115829315 115829420 -4454892 + ID_B1 SINE B4 115 223 -1 5 1468 235 0 0 54 chr13 115829420 115829457 -4454855 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 5 1468 184 313 67 57 chr13 115829590 115829695 -4454617 - L2c LINE L2 -342 3045 2940 5 1468 435 38 0 0 chr13 115829753 115829806 -4454506 + (TATG)n Simple_repeat Simple_repeat 2 54 0 5 1468 417 294 9 0 chr13 115829821 115829930 -4454382 - PB1D10 SINE Alu -7 110 1 5 1468 328 235 124 90 chr13 115830397 115830542 -4453770 + RLTR23 LTR ERV1 244 393 -37 5 1468 399 41 0 0 chr13 115830716 115830765 -4453547 + (GA)n Simple_repeat Simple_repeat 2 50 0 5 1468 929 216 20 5 chr13 115831629 115831824 -4452488 - Lx9 LINE L1 -475 7169 6972 5 1468 905 183 196 26 chr13 115831829 115832058 -4452254 + Lx9 LINE L1 7148 7415 -229 5 1468 333 0 0 0 chr13 115832072 115832109 -4452203 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1468 699 12 0 0 chr13 115832119 115832199 -4452113 + (GAAA)n Simple_repeat Simple_repeat 4 83 0 5 1468 319 178 66 47 chr13 115832199 115832305 -4452007 + Lx9 LINE L1 7537 7644 0 5 1468 41 47 0 34 chr13 115833364 115833452 -4450860 + AT_rich Low_complexity Low_complexity 1 85 0 5 1468 28 86 0 0 chr13 115833462 115833532 -4450780 + AT_rich Low_complexity Low_complexity 1 70 0 5 1468 663 231 14 20 chr13 115833939 115834085 -4450227 - B1_Mur1 SINE Alu 0 149 5 5 1468 1201 51 0 0 chr13 115835116 115835253 -4449059 + B1_Mm SINE Alu 2 138 -9 5 1468 420 16 46 15 chr13 115835253 115835318 -4448994 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 5 1468 1746 37 0 0 chr13 115836713 115836903 -4447409 - B2_Mm1a SINE B2 -2 191 2 5 1468 377 352 7 40 chr13 115837172 115837323 -4446989 - ID_B1 SINE B4 -1 223 78 5 1468 201 317 86 38 chr13 115840864 115840969 -4443343 + L2c LINE L2 3240 3349 -38 5 1468 249 226 48 0 chr13 115841280 115841342 -4442970 - L3b LINE CR1 -243 239 175 5 1468 235 356 190 11 chr13 115841500 115841679 -4442633 - MER20 DNA MER1_type -3 216 6 5 1468 481 322 44 52 chr13 115845550 115845799 -4438513 - B4A SINE B4 0 292 46 5 1468 279 0 0 0 chr13 115846732 115846763 -4437549 + (A)n Simple_repeat Simple_repeat 1 31 0 5 1468 523 267 25 25 chr13 115846779 115846898 -4437414 + B1F1 SINE Alu 5 123 -26 5 1468 227 104 62 0 chr13 115846959 115847007 -4437305 + T-rich Low_complexity Low_complexity 1 51 0 5 1468 1201 68 0 7 chr13 115847009 115847157 -4437155 - B1_Mm SINE Alu 0 147 1 5 1468 207 0 0 0 chr13 115847277 115847300 -4437012 + (TTG)n Simple_repeat Simple_repeat 1 23 0 5 1468 364 276 0 13 chr13 115848420 115848497 -4435815 + ID4_ SINE ID 2 77 -6 5 1468 367 340 99 60 chr13 115848509 115848607 -4435705 + LTR79 LTR ERVL 3 105 -422 5 1468 1233 69 0 0 chr13 115848607 115848751 -4435561 - B1_Mus2 SINE Alu -1 146 3 5 1468 367 340 99 60 chr13 115848751 115848884 -4435428 + LTR79 LTR ERVL 106 243 -284 5 1468 1317 120 22 0 chr13 115849826 115850009 -4434303 + B2_Mm2 SINE B2 1 187 -8 5 1468 396 125 0 0 chr13 115850325 115850389 -4433923 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1468 503 340 26 126 chr13 115851197 115851587 -4432725 + MLT1A LTR MaLR 19 369 -5 5 1468 25 0 0 0 chr13 115851756 115851781 -4432531 + AT_rich Low_complexity Low_complexity 1 25 0 5 1468 513 47 0 0 chr13 115852661 115852725 -4431587 + (GA)n Simple_repeat Simple_repeat 2 65 0 5 1468 1494 33 0 0 chr13 115852728 115852908 -4431404 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 5 1468 935 42 8 0 chr13 115853594 115853714 -4430598 + (GGAA)n Simple_repeat Simple_repeat 4 124 0 5 1468 1155 241 27 23 chr13 115854358 115854659 -4429653 + Lx5 LINE L1 6518 6819 -231 5 1468 844 229 122 108 chr13 115854843 115855412 -4428900 + RMER17C-int LTR ERVK 2627 3179 -59 5 1468 684 259 0 0 chr13 115855437 115855580 -4428732 + RMER10A LTR ERVL 1 143 -299 5 1468 1037 217 30 21 chr13 115855575 115855810 -4428502 - RMER10A LTR ERVL -205 237 1 5 1468 1347 91 45 0 chr13 115855846 115856022 -4428290 - B2_Mm2 SINE B2 -11 184 1 5 1468 478 319 79 77 chr13 115856077 115856543 -4427769 + MLT1C LTR MaLR 1 467 0 5 1468 820 317 112 47 chr13 115856690 115857137 -4427175 + L1MB5 LINE L1 5328 5813 -361 5 1468 360 0 0 0 chr13 115857137 115857177 -4427135 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1468 820 317 112 47 chr13 115857177 115857407 -4426905 + L1MB5 LINE L1 5814 6049 -125 5 1468 226 169 68 0 chr13 115857530 115857589 -4426723 - L1MD2 LINE L1 -4 6355 6293 5 1468 4889 90 2 20 chr13 115860332 115860977 -4423335 - L1_Mus1 LINE L1 0 6567 5935 5 1468 4982 58 5 0 chr13 115860977 115861657 -4422655 + L1_Mus1 LINE L1 5245 5927 -639 5 1468 429 20 0 0 chr13 115861906 115861956 -4422356 + (CA)n Simple_repeat Simple_repeat 1 50 0 5 1468 751 159 8 8 chr13 115863070 115863203 -4421109 - URR1B DNA MER1_type 0 225 93 5 1468 385 273 59 18 chr13 115863503 115863723 -4420589 - Lx7 LINE L1 -7 7689 7461 5 1468 632 269 7 0 chr13 115863861 115864002 -4420310 - B1F SINE Alu -2 147 6 5 1468 638 61 0 0 chr13 115864293 115864375 -4419937 + B1_Mur4 SINE Alu 67 148 -2 5 1468 22 0 0 0 chr13 115864375 115864397 -4419915 + AT_rich Low_complexity Low_complexity 1 22 0 5 1468 512 106 0 12 chr13 115864857 115864943 -4419369 + (TCC)n Simple_repeat Simple_repeat 2 86 0 5 1468 544 240 0 76 chr13 115865834 115865965 -4418347 - B1_Mur1 SINE Alu -1 148 28 5 1468 5399 86 19 10 chr13 115866250 115867048 -4417264 + RLTR13C2 LTR ERVK 4 983 0 5 1468 282 29 0 0 chr13 115867252 115867287 -4417025 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1468 439 296 16 57 chr13 115867317 115867439 -4416873 - RSINE1 SINE B4 -47 118 2 5 1469 246 307 11 22 chr13 115870128 115870218 -4414094 - MER5B DNA MER1_type -9 169 81 5 1469 393 58 0 0 chr13 115871308 115871360 -4412952 + (TG)n Simple_repeat Simple_repeat 2 53 0 5 1469 593 223 77 0 chr13 115871369 115871499 -4412813 - B3A SINE B2 -42 156 17 5 1469 612 0 0 0 chr13 115871577 115871645 -4412667 + (TG)n Simple_repeat Simple_repeat 1 68 0 5 1469 351 0 0 0 chr13 115871645 115871683 -4412629 + (GA)n Simple_repeat Simple_repeat 1 39 0 5 1469 210 26 50 25 chr13 115873081 115873121 -4411191 + (CAT)n Simple_repeat Simple_repeat 3 43 0 5 1469 566 333 27 60 chr13 115873476 115873776 -4410536 + B4 SINE B4 1 290 -2 5 1469 189 292 114 9 chr13 115874121 115874235 -4410077 + MIR SINE MIR 71 196 -66 5 1469 407 229 153 0 chr13 115874498 115874642 -4409670 - RCHARR1 DNA MER1_type -465 509 344 5 1469 197 33 33 0 chr13 115874657 115874687 -4409625 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1469 816 43 25 25 chr13 115874687 115874796 -4409516 - B1_Mus2 SINE Alu -9 138 29 5 1469 411 254 57 21 chr13 115874896 115875037 -4409275 + RCHARR1 DNA MER1_type 532 677 -297 5 1469 22 70 0 0 chr13 115875109 115875152 -4409160 + AT_rich Low_complexity Low_complexity 1 43 0 5 1469 513 180 11 0 chr13 115875329 115875418 -4408894 - PB1D10 SINE Alu -7 110 21 5 1469 1056 157 21 46 chr13 115875732 115875926 -4408386 - URR1A DNA MER1_type -27 199 11 5 1469 215 275 48 36 chr13 115876360 115876443 -4407869 + L2 LINE L2 2729 2812 -607 5 1469 374 276 0 9 chr13 115877100 115877206 -4407106 - B1_Mur1 SINE Alu -43 106 2 5 1469 237 159 0 0 chr13 115878282 115878326 -4405986 + G-rich Low_complexity Low_complexity 1 44 0 5 1469 202 205 0 0 chr13 115881190 115881229 -4403083 + A-rich Low_complexity Low_complexity 2 40 0 5 1469 270 0 0 0 chr13 115881772 115881802 -4402510 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 5 1469 601 285 100 21 chr13 115882232 115882422 -4401890 - ID_B1 SINE B4 -18 206 2 5 1469 279 0 0 0 chr13 115882523 115882554 -4401758 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 5 1469 472 229 117 65 chr13 115883697 115883851 -4400461 + RSINE1 SINE B4 4 165 0 5 1469 481 274 20 0 chr13 115885292 115885394 -4398918 + ID_B1 SINE B4 106 209 -15 5 1469 673 212 13 70 chr13 115886119 115886276 -4398036 - B1_Mur1 SINE Alu 0 149 2 5 1469 1792 185 44 47 chr13 115886462 115886892 -4397420 - RMER10A LTR ERVL 0 442 14 5 1469 383 280 132 16 chr13 115887731 115887959 -4396353 - MTEb LTR MaLR -3 376 98 5 1469 228 366 78 69 chr13 115888667 115888884 -4395428 + MIRb SINE MIR 29 247 -21 5 1469 262 305 27 62 chr13 115889612 115889724 -4394588 + MLT1D LTR MaLR 1 108 -397 5 1469 345 267 22 0 chr13 115889914 115890004 -4394308 + MLT1D LTR MaLR 408 499 -6 5 1469 1536 22 0 0 chr13 115892736 115892916 -4391396 + (TTCTCC)n Simple_repeat Simple_repeat 1 180 0 5 1469 351 65 0 0 chr13 115892916 115892962 -4391350 + (TCC)n Simple_repeat Simple_repeat 3 48 0 5 1469 1028 58 0 55 chr13 115893327 115893473 -4390839 + B1_Mm SINE Alu 10 147 0 5 1469 1097 128 0 6 chr13 115893483 115893664 -4390648 + (GGAGAA)n Simple_repeat Simple_repeat 1 180 0 5 1469 377 211 26 35 chr13 115893700 115893813 -4390499 + PB1D10 SINE Alu 4 115 -2 5 1469 432 0 0 0 chr13 115893826 115893874 -4390438 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1469 1315 199 35 64 chr13 115893971 115894315 -4389997 + ORR1D1 LTR MaLR 41 374 0 5 1469 192 329 89 81 chr13 115894398 115894517 -4389795 + MIR SINE MIR 7 116 -146 5 1469 1187 90 51 0 chr13 115894517 115894694 -4389618 - B2_Mm2 SINE B2 -7 188 3 5 1469 237 291 65 35 chr13 115894694 115894809 -4389503 + MIRb SINE MIR 117 247 -21 5 1469 28 48 0 0 chr13 115895284 115895326 -4388986 + AT_rich Low_complexity Low_complexity 1 42 0 5 1469 21 36 0 0 chr13 115895370 115895398 -4388914 + AT_rich Low_complexity Low_complexity 1 28 0 6 1469 284 276 47 47 chr13 115895527 115895656 -4388656 - Lx8 LINE L1 -149 7324 7196 6 1469 24 53 0 0 chr13 115895771 115895809 -4388503 + AT_rich Low_complexity Low_complexity 1 38 0 6 1469 204 67 0 0 chr13 115895819 115895849 -4388463 + (TCTA)n Simple_repeat Simple_repeat 2 31 0 6 1469 798 163 22 0 chr13 115895850 115895985 -4388327 - B1_Mur4 SINE Alu -9 141 4 6 1469 462 193 0 0 chr13 115896016 115896099 -4388213 - ID2 SINE ID 0 83 1 6 1469 2399 292 91 16 chr13 115897520 115898375 -4385937 - MTEa-int LTR MaLR -661 919 1 6 1469 579 314 156 5 chr13 115898383 115898594 -4385718 - MTEa LTR MaLR -11 368 126 6 1469 656 299 17 45 chr13 115898998 115899285 -4385027 + Lx9 LINE L1 6915 7193 -451 6 1469 270 300 153 43 chr13 115900223 115900390 -4383922 - RMER10A LTR ERVL -25 417 231 6 1469 492 18 0 0 chr13 115900390 115900447 -4383865 + (GA)n Simple_repeat Simple_repeat 2 58 0 6 1469 270 300 153 43 chr13 115900447 115900631 -4383681 - RMER10A LTR ERVL -212 230 28 6 1469 737 255 108 93 chr13 115901395 115901490 -4382822 + L1MB7 LINE L1 1588 1673 -5231 6 1469 518 304 47 6 chr13 115901490 115901662 -4382650 + B3A SINE B2 1 179 -19 6 1469 737 256 113 88 chr13 115901662 115902059 -4382253 + L1MB7 LINE L1 1674 2087 -5247 6 1469 278 344 88 18 chr13 115902092 115902376 -4381936 + L1MB7 LINE L1 2130 2433 -4575 6 1469 227 288 125 0 chr13 115902467 115902547 -4381765 + B1F2 SINE Alu 12 101 -48 6 1469 376 296 25 0 chr13 115902895 115903054 -4381258 + L1MB7 LINE L1 5826 5988 -1018 6 1469 589 272 136 51 chr13 115903334 115903417 -4380895 + L1MB7 LINE L1 6303 6398 -646 6 1469 389 224 190 13 chr13 115903417 115903575 -4380737 - B2_Mm2 SINE B2 -9 186 1 6 1469 589 271 125 31 chr13 115903575 115903934 -4380378 + L1MB7 LINE L1 6399 6781 -370 6 1469 745 280 113 0 chr13 115903973 115904159 -4380153 + B4A SINE B4 1 207 -85 6 1469 13583 113 63 67 chr13 115904176 115904399 -4379913 + Lx4A LINE L1 3252 3475 -2402 6 1469 195 42 0 0 chr13 115904399 115904423 -4379889 + (CACCC)n Simple_repeat Simple_repeat 4 27 0 6 1469 13583 113 63 67 chr13 115904423 115905438 -4378874 + Lx4A LINE L1 3476 4630 -1247 6 1469 417 115 0 0 chr13 115905438 115905516 -4378796 + (CA)n Simple_repeat Simple_repeat 2 79 0 6 1469 13583 115 53 59 chr13 115905516 115906334 -4377978 + Lx4A LINE L1 4631 5422 -1636 6 1469 577 196 0 0 chr13 115906334 115906431 -4377881 + U6 snRNA snRNA 1 97 -10 6 1469 13583 115 53 59 chr13 115906431 115907234 -4377078 + Lx4A LINE L1 5423 6201 -857 6 1469 2046 154 6 0 chr13 115907234 115907558 -4376754 + ORR1A3 LTR MaLR 1 326 0 6 1469 4956 126 8 23 chr13 115907558 115907770 -4376542 + Lx4A LINE L1 6202 6403 -655 6 1469 3012 155 25 6 chr13 115907770 115908289 -4376023 + Lx4A LINE L1 6528 7056 -2 6 1469 207 0 0 0 chr13 115908300 115908323 -4375989 + (CCA)n Simple_repeat Simple_repeat 2 24 0 6 1469 216 0 0 0 chr13 115908335 115908359 -4375953 + (A)n Simple_repeat Simple_repeat 1 24 0 6 1469 429 36 0 0 chr13 115908452 115908507 -4375805 + (CA)n Simple_repeat Simple_repeat 1 55 0 6 1469 1692 21 0 0 chr13 115909450 115909641 -4374671 - B2_Mm1a SINE B2 -2 191 1 6 1469 411 73 0 0 chr13 115909867 115909922 -4374390 + (TTTA)n Simple_repeat Simple_repeat 1 55 0 6 1469 602 234 0 16 chr13 115909922 115910048 -4374264 - B3 SINE B2 -14 202 79 6 1469 22 35 0 0 chr13 115910195 115910224 -4374088 + AT_rich Low_complexity Low_complexity 1 29 0 6 1469 3988 78 44 17 chr13 115910967 115911541 -4372771 - L1_Mus2 LINE L1 0 6566 5978 6 1469 422 347 85 51 chr13 115913083 115913259 -4371053 - LTR33A_ LTR ERVL -315 216 35 6 1469 279 0 0 0 chr13 115913259 115913290 -4371022 + (CAGA)n Simple_repeat Simple_repeat 2 32 0 6 1469 313 296 91 136 chr13 115913290 115913312 -4371000 - LTR33A_ LTR ERVL -486 34 13 6 1469 812 170 7 0 chr13 115916160 115916307 -4368005 + URR1A DNA MER1_type 79 226 0 6 1469 476 341 0 129 chr13 115916964 115917173 -4367139 + B3A SINE B2 1 182 -16 6 1469 749 63 0 0 chr13 115917175 115917270 -4367042 + BGLII_Mus LTR ERVK 1 95 -327 6 1469 1195 109 11 0 chr13 115917272 115917447 -4366865 + BGLII_Mus LTR ERVK 243 419 -3 6 1469 360 0 0 0 chr13 115917447 115917487 -4366825 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1469 246 267 33 0 chr13 115917883 115917943 -4366369 + polypyrimidine Low_complexity Low_complexity 4 65 0 6 1469 2511 206 2 18 chr13 115918370 115918884 -4365428 + Lx5 LINE L1 6260 6765 -285 6 1469 229 171 23 58 chr13 115919668 115919755 -4364557 + (TTTA)n Simple_repeat Simple_repeat 3 86 0 6 1469 467 345 33 26 chr13 115919768 115919920 -4364392 - RSINE1 SINE B4 -3 162 10 6 1469 576 230 0 0 chr13 115920159 115920272 -4364040 - PB1D9 SINE Alu -7 113 1 6 1469 709 156 57 31 chr13 115920848 115921007 -4363305 + Lx3A LINE L1 6814 6976 -5 6 1469 1635 164 21 36 chr13 115921076 115921405 -4362907 + Lx4B LINE L1 6726 7049 -9 6 1469 270 0 0 0 chr13 115921407 115921437 -4362875 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 6 1469 256 349 98 56 chr13 115922114 115922348 -4361964 - MER102b DNA MER1_type -85 256 13 6 1469 459 87 0 0 chr13 115922423 115922492 -4361820 + (TG)n Simple_repeat Simple_repeat 1 69 0 6 1469 489 17 0 0 chr13 115922492 115922549 -4361763 + (GA)n Simple_repeat Simple_repeat 1 58 0 6 1469 241 297 0 26 chr13 115922571 115922647 -4361665 + CT-rich Low_complexity Low_complexity 3 76 0 6 1469 432 0 0 0 chr13 115922954 115923002 -4361310 + (TG)n Simple_repeat Simple_repeat 2 49 0 6 1469 243 0 0 0 chr13 115923130 115923157 -4361155 + (TA)n Simple_repeat Simple_repeat 2 28 0 6 1469 443 149 91 0 chr13 115923587 115923708 -4360604 - Lx9 LINE L1 0 7644 7513 6 1469 479 60 15 0 chr13 115923709 115923776 -4360536 + (CA)n Simple_repeat Simple_repeat 1 68 0 6 1469 352 86 35 0 chr13 115923778 115923836 -4360476 - Lx9 LINE L1 -207 7437 7378 6 1469 707 293 60 5 chr13 115923838 115924037 -4360275 - B4A SINE B4 -82 210 1 6 1469 2741 219 40 46 chr13 115924068 115924988 -4359324 - L1_Rod LINE L1 -3492 2355 1441 6 1469 827 242 38 19 chr13 115925004 115925215 -4359097 + B3 SINE B2 2 216 0 6 1469 21 0 0 0 chr13 115925215 115925236 -4359076 + AT_rich Low_complexity Low_complexity 1 21 0 6 1469 1335 167 0 0 chr13 115925300 115925521 -4358791 - URR1A DNA MER1_type 0 226 6 6 1469 3682 131 65 28 chr13 115925803 115926449 -4357863 + Lx4A LINE L1 6389 7058 0 6 1469 23 0 0 0 chr13 115926454 115926477 -4357835 + AT_rich Low_complexity Low_complexity 1 23 0 6 1469 225 0 0 0 chr13 115926898 115926923 -4357389 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 6 1469 2831 152 13 74 chr13 115927504 115928060 -4356252 - RLTR11A LTR ERVK 0 528 7 6 1469 503 331 40 89 chr13 115928069 115928371 -4355941 - MLT1A LTR MaLR -66 308 22 6 1469 474 343 118 16 chr13 115928483 115928856 -4355456 - L2 LINE L2 -455 2964 2554 6 1469 28 0 0 0 chr13 115929753 115929781 -4354531 + AT_rich Low_complexity Low_complexity 1 28 0 6 1469 22 35 0 0 chr13 115929829 115929858 -4354454 + AT_rich Low_complexity Low_complexity 1 29 0 6 1469 629 239 171 65 chr13 115930032 115930202 -4354110 + B3 SINE B2 2 189 -27 6 1469 371 321 11 36 chr13 115930425 115930540 -4353772 + B4A SINE B4 47 158 -134 6 1469 222 333 59 67 chr13 115930475 115930610 -4353702 + B3 SINE B2 80 213 -3 6 1469 495 0 0 0 chr13 115931563 115931618 -4352694 + (CA)n Simple_repeat Simple_repeat 2 56 0 6 1469 577 98 0 38 chr13 115931729 115931798 -4352514 - L1_Mus2 LINE L1 -553 6013 5946 6 1469 1070 61 0 26 chr13 115931798 115931949 -4352363 + L1_Mus2 LINE L1 6419 6565 -1 6 1469 577 98 0 38 chr13 115931949 115931985 -4352327 - L1_Mus2 LINE L1 -621 5945 5912 6 1469 256 216 20 0 chr13 115932958 115933009 -4351303 + MLT1M LTR MaLR 612 663 -9 6 1469 425 312 37 59 chr13 115934764 115934900 -4349412 + MLT1A1 LTR MaLR 212 344 -64 6 1469 7289 84 4 1 chr13 115935418 115936913 -4347399 + L1_Mus1 LINE L1 5069 6567 0 6 1469 254 260 48 194 chr13 115938568 115938754 -4345558 - RMER15 LTR ERVL -416 159 1 6 1469 307 271 44 89 chr13 115938754 115938892 -4345420 - RMER15 LTR ERVL -172 403 273 6 1469 1298 334 81 53 chr13 115939052 115939984 -4344328 - ORR1E-int LTR MaLR -462 908 1 6 1469 731 295 54 21 chr13 115939986 115940228 -4344084 - ORR1E LTR MaLR 0 359 110 6 1469 441 344 24 18 chr13 115940407 115940573 -4343739 + B4 SINE B4 57 223 -69 6 1469 322 315 0 9 chr13 115940644 115940753 -4343559 + (CA)n Simple_repeat Simple_repeat 1 108 0 6 1469 249 329 12 12 chr13 115941129 115941212 -4343100 - L2a LINE L2 -5 3421 3339 6 1469 1215 89 44 16 chr13 115941234 115941416 -4342896 + B2_Mm2 SINE B2 1 187 -8 6 1469 409 307 112 69 chr13 115941620 115941896 -4342416 - B4 SINE B4 0 292 5 6 1469 29 28 0 0 chr13 115942054 115942090 -4342222 + AT_rich Low_complexity Low_complexity 1 36 0 6 1469 258 303 22 0 chr13 115942302 115942391 -4341921 - L1MA5A LINE L1 -383 5914 5824 6 1469 615 261 153 14 chr13 115942406 115942895 -4341417 - L1MA5A LINE L1 -537 5763 5200 6 1469 228 279 0 32 chr13 115943957 115944020 -4340292 + B3A SINE B2 2 62 -136 6 1469 715 162 17 6 chr13 115944020 115944194 -4340118 - L1_Mm LINE L1 -3755 2128 1953 6 1469 2661 84 16 0 chr13 115944194 115944565 -4339747 + L1_Mus4 LINE L1 6260 6636 0 6 1469 321 224 0 0 chr13 115944576 115944634 -4339678 + B3 SINE B2 39 96 -120 6 1469 971 218 26 5 chr13 115944642 115944836 -4339476 - B3 SINE B2 -12 204 7 6 1469 255 257 29 19 chr13 115945079 115945182 -4339130 + (TA)n Simple_repeat Simple_repeat 1 104 0 6 1469 642 153 184 8 chr13 115945628 115945753 -4338559 + B1_Mus1 SINE Alu 2 148 0 6 1469 342 319 60 66 chr13 115945756 115945783 -4338529 + ID_B1 SINE B4 70 219 -5 6 1469 622 242 65 0 chr13 115945783 115945907 -4338405 + B1_Mur1 SINE Alu 13 144 -5 6 1469 315 0 0 0 chr13 115946728 115946763 -4337549 + (CA)n Simple_repeat Simple_repeat 1 35 0 6 1469 846 216 50 10 chr13 115946775 115946976 -4337336 + B3 SINE B2 1 209 -7 6 1469 290 388 69 40 chr13 115947310 115947557 -4336755 + MIRb SINE MIR 1 254 -14 6 1469 180 325 48 12 chr13 115947756 115947840 -4336472 + MIRm SINE MIR 78 164 -112 6 1469 549 0 0 0 chr13 115948134 115948195 -4336117 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 6 1469 1149 102 38 38 chr13 115948488 115948671 -4335641 - B2_Mm2 SINE B2 -11 184 2 6 1469 217 216 0 108 chr13 115949144 115949227 -4335085 - BC1_Mm scRNA scRNA -30 122 49 6 1469 342 0 0 0 chr13 115949251 115949289 -4335023 + (TG)n Simple_repeat Simple_repeat 1 38 0 6 1469 608 277 28 14 chr13 115949319 115949462 -4334850 - B4A SINE B4 0 292 148 6 1469 216 0 0 0 chr13 115950418 115950442 -4333870 + (TG)n Simple_repeat Simple_repeat 1 24 0 6 1469 640 269 44 33 chr13 115950453 115950634 -4333678 - B4 SINE B4 -7 285 103 6 1469 247 182 0 22 chr13 115950641 115950686 -4333626 + RMER10A LTR ERVL 1 44 -398 7 1469 180 0 0 0 chr13 115950994 115951014 -4333298 + (A)n Simple_repeat Simple_repeat 1 20 0 7 1469 243 0 0 0 chr13 115951894 115951921 -4332391 + (TC)n Simple_repeat Simple_repeat 2 28 0 7 1469 1816 215 38 10 chr13 115952059 115952459 -4331853 + MTC LTR MaLR 3 413 -8 7 1469 449 35 0 0 chr13 115955153 115955210 -4329102 - Lx2 LINE L1 -736 6261 6205 7 1469 2359 97 11 54 chr13 115955210 115955286 -4329026 + Lx2 LINE L1 6644 6716 -281 7 1469 2348 102 16 0 chr13 115955286 115955608 -4328704 + ORR1A2 LTR MaLR 1 327 0 7 1469 2359 97 11 54 chr13 115955608 115955901 -4328411 + Lx2 LINE L1 6717 6997 0 7 1469 233 295 169 11 chr13 115956977 115957066 -4327246 - L2a LINE L2 0 3426 3324 7 1469 1862 183 32 21 chr13 115957684 115958058 -4326254 - ORR1C1 LTR MaLR 0 378 1 7 1469 197 302 16 0 chr13 115958152 115958215 -4326097 + MIRb SINE MIR 19 82 -186 7 1469 363 96 0 0 chr13 115959614 115959666 -4324646 + (TCC)n Simple_repeat Simple_repeat 1 52 0 7 1469 607 264 14 7 chr13 115959672 115959813 -4324499 - B1_Mus2 SINE Alu -5 142 1 7 1469 243 114 0 0 chr13 115959836 115959880 -4324432 + (TG)n Simple_repeat Simple_repeat 2 45 0 7 1469 4172 68 9 0 chr13 115960050 115960583 -4323729 - L1_Mus1 LINE L1 0 6567 6030 7 1469 324 0 0 0 chr13 115961264 115961300 -4323012 + (T)n Simple_repeat Simple_repeat 1 36 0 7 1469 225 259 0 33 chr13 115962743 115962803 -4321509 - MER105 DNA DNA -113 91 34 7 1469 5170 124 27 18 chr13 115962863 115963706 -4320606 - Lx3B LINE L1 -3 6970 6120 7 1469 1288 118 0 5 chr13 115964355 115964543 -4319769 - B2_Mm2 SINE B2 -8 187 1 7 1469 22 0 0 0 chr13 115964669 115964691 -4319621 + AT_rich Low_complexity Low_complexity 1 22 0 7 1469 21 57 0 0 chr13 115964739 115964774 -4319538 + AT_rich Low_complexity Low_complexity 1 35 0 7 1469 521 315 6 0 chr13 115964783 115964961 -4319351 + (TG)n Simple_repeat Simple_repeat 2 180 0 7 1469 460 269 8 0 chr13 115965032 115965166 -4319146 + L1MC1 LINE L1 3560 3694 -2452 7 1469 342 316 65 0 chr13 115965166 115965334 -4318978 + L1MD LINE L1 3670 3848 -2298 7 1469 443 331 37 0 chr13 115965339 115965475 -4318837 + RSINE1 SINE B4 3 143 -22 7 1469 372 271 87 33 chr13 115965504 115965687 -4318625 + L1MC1 LINE L1 3834 4026 -2120 7 1469 228 128 60 60 chr13 115965694 115965794 -4318518 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 7 1469 297 171 45 30 chr13 115965846 115965979 -4318333 + (TA)n Simple_repeat Simple_repeat 2 136 0 7 1469 259 127 32 0 chr13 115966096 115966159 -4318153 + (TA)n Simple_repeat Simple_repeat 1 65 0 7 1469 870 324 78 19 chr13 115966185 115966959 -4317353 + L1MC1 LINE L1 4061 4879 -1267 7 1469 293 323 90 40 chr13 115967188 115967288 -4317024 + RSINE1 SINE B4 43 147 -18 7 1469 529 268 63 14 chr13 115967301 115967582 -4316730 + L1MC1 LINE L1 5144 5439 -894 7 1469 621 274 143 50 chr13 115967828 115968450 -4315862 + L1MC1 LINE L1 5485 6164 -169 7 1469 1893 252 62 34 chr13 115969084 115969618 -4314694 - RMER15 LTR ERVL 0 575 27 7 1469 213 353 29 0 chr13 115969771 115969839 -4314473 + MIRm SINE MIR 20 89 -187 7 1469 1142 171 37 5 chr13 115969960 115970178 -4314134 + URR1B DNA MER1_type 1 225 0 7 1469 311 202 0 12 chr13 115970932 115971017 -4313295 + (TA)n Simple_repeat Simple_repeat 2 85 0 7 1469 413 189 51 34 chr13 115971144 115971319 -4312993 + (TA)n Simple_repeat Simple_repeat 2 179 0 7 1469 2112 143 123 13 chr13 115971556 115971953 -4312359 + RMER6B LTR ERVK 4 444 -17 7 1469 194 358 79 56 chr13 115972261 115972477 -4311835 - L2a LINE L2 -8 3418 3198 7 1469 712 207 108 35 chr13 115972695 115972909 -4311403 - RMER19B LTR ERVK -397 505 85 7 1469 1958 226 53 36 chr13 115973172 115973695 -4310617 + RMER5 LTR ERV1 3 534 0 7 1469 183 316 126 17 chr13 115974399 115974518 -4309794 + L3 LINE CR1 3796 3927 -562 7 1469 249 314 35 28 chr13 115974872 115975013 -4309299 - MER53 DNA hAT -10 183 42 7 1469 709 144 15 0 chr13 115975101 115975233 -4309079 + CT-rich Low_complexity Low_complexity 3 136 0 7 1469 429 356 13 0 chr13 115975308 115975457 -4308855 - MER58A DNA MER1_type -70 154 4 7 1469 380 239 45 44 chr13 115975538 115975717 -4308595 - RLTR28 LTR ERVL 0 524 254 7 1469 186 43 0 0 chr13 115975717 115975740 -4308572 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 7 1469 718 222 89 36 chr13 115975758 115975982 -4308330 - Lx5 LINE L1 -37 7013 6778 7 1469 1988 160 0 0 chr13 115975977 115976295 -4308017 + Lx5 LINE L1 6466 6783 -267 7 1469 1149 144 15 119 chr13 115976295 115976555 -4307757 - RLTR28 LTR ERVL -267 257 25 7 1469 1060 74 0 14 chr13 115978122 115978260 -4306052 + B1_Mus1 SINE Alu 2 137 -11 7 1469 324 0 0 0 chr13 115978260 115978296 -4306016 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 7 1469 782 181 213 39 chr13 115979658 115979916 -4304396 - Lx7 LINE L1 0 7696 7394 7 1469 1760 133 56 3 chr13 115980179 115980466 -4303846 + Lx2 LINE L1 6694 6995 -2 7 1469 342 172 0 15 chr13 115981467 115981481 -4302831 + HAL1-3A_ME LINE L1 1964 1977 -881 7 1469 198 91 0 0 chr13 115981481 115981514 -4302798 + (CAGA)n Simple_repeat Simple_repeat 4 36 0 7 1469 342 172 0 15 chr13 115981514 115981564 -4302748 + HAL1-3A_ME LINE L1 1978 2026 -832 7 1469 552 133 6 0 chr13 115981564 115981723 -4302589 + (CA)n Simple_repeat Simple_repeat 1 160 0 7 1469 207 0 0 0 chr13 115981802 115981825 -4302487 + (TA)n Simple_repeat Simple_repeat 2 24 0 7 1469 3058 28 3 0 chr13 115981825 115982188 -4302124 - L1Md_F2 LINE L1 -15 6567 6204 7 1469 381 313 89 6 chr13 115983004 115983184 -4301128 - LTR53 LTR ERVL -91 428 234 7 1469 214 211 263 0 chr13 115984025 115984101 -4300211 + B1F2 SINE Alu 53 148 -1 7 1469 305 289 13 0 chr13 115984117 115984193 -4300119 + ID2 SINE ID 2 78 -5 7 1469 216 0 0 0 chr13 115984194 115984218 -4300094 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 7 1469 375 23 0 0 chr13 115984242 115984286 -4300026 + (TAA)n Simple_repeat Simple_repeat 3 46 0 7 1469 1428 203 72 84 chr13 115984426 115984830 -4299482 + MTD LTR MaLR 19 417 -2 7 1469 1585 219 67 93 chr13 115984876 115985444 -4298868 + RMER2 LTR ERV1 11 563 -4 7 1469 337 305 50 25 chr13 115985470 115985591 -4298721 + B1F SINE Alu 19 142 -7 7 1469 630 242 82 39 chr13 115985599 115985805 -4298507 + B3 SINE B2 2 216 0 7 1469 249 33 0 0 chr13 115985857 115985887 -4298425 + (TG)n Simple_repeat Simple_repeat 1 30 0 7 1469 826 67 58 0 chr13 115986619 115986739 -4297573 + L1_Mus2 LINE L1 6440 6566 0 7 1469 201 39 0 0 chr13 115987308 115987334 -4296978 + (TCTG)n Simple_repeat Simple_repeat 2 27 0 7 1469 487 195 135 75 chr13 115987354 115987487 -4296825 - B1_Mur1 SINE Alu -3 146 6 7 1469 270 351 30 38 chr13 115988460 115988593 -4295719 + MIR SINE MIR 109 240 -22 7 1469 1030 230 25 13 chr13 115993132 115993370 -4290942 + Lx5 LINE L1 6803 7043 -7 7 1469 30 0 0 0 chr13 115993773 115993803 -4290509 + AT_rich Low_complexity Low_complexity 1 30 0 7 1469 6875 58 1 0 chr13 115993835 115994742 -4289570 + L1Md_F2 LINE L1 4679 5586 -297 7 1469 8199 44 4 0 chr13 115994743 115995733 -4288579 + L1Md_F2 LINE L1 5588 6581 -1 7 1469 416 307 59 0 chr13 115996366 115996519 -4287793 - MLT2B3 LTR ERVL -392 162 1 7 1469 642 60 0 0 chr13 115996526 115996609 -4287703 + (TA)n Simple_repeat Simple_repeat 2 84 0 7 1469 537 16 0 0 chr13 115996768 115996830 -4287482 + (GA)n Simple_repeat Simple_repeat 2 63 0 7 1469 320 314 76 8 chr13 115996920 115997039 -4287273 - L1MEg LINE L1 -4556 1528 1402 7 1469 666 356 75 6 chr13 115997718 115998077 -4286235 + MER77 LTR ERVL 214 597 -10 7 183 2258 129 30 3 chr13 115998558 115998931 -4285381 - Lx LINE L1 -2 6652 6270 7 1470 212 143 24 0 chr13 115998990 115999032 -4285280 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1470 284 89 0 0 chr13 115999064 115999109 -4285203 + L1MD2 LINE L1 6109 6153 -206 7 1470 414 0 0 0 chr13 116000746 116000792 -4283520 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 1 1470 3050 61 5 5 chr13 116003315 116003710 -4280602 - MTA_Mm LTR MaLR -1 395 1 2 1470 770 163 6 28 chr13 116005278 116005455 -4278857 + T-rich Low_complexity Low_complexity 3 175 0 3 1470 1218 98 65 5 chr13 116005464 116005648 -4278664 - B2_Mm2 SINE B2 0 195 1 4 1470 332 352 0 62 chr13 116006499 116006629 -4277683 - RSINE1 SINE B4 0 165 44 5 1470 445 198 0 16 chr13 116006966 116007089 -4277223 + GA-rich Low_complexity Low_complexity 3 123 0 6 1470 1352 56 6 0 chr13 116007089 116007267 -4277045 + (GAA)n Simple_repeat Simple_repeat 1 179 0 7 1470 1747 204 119 5 chr13 116007742 116008161 -4276151 - Lx9 LINE L1 -7 7637 7171 8 1470 282 304 135 21 chr13 116008596 116008878 -4275434 - L1MA8 LINE L1 -379 5912 5599 9 1470 395 117 0 0 chr13 116010441 116010674 -4273638 - L1Md_F2 LINE L1 0 6582 6502 1 1470 560 328 0 20 chr13 116012210 116012412 -4271900 - B3A SINE B2 0 198 1 1 1470 737 311 100 38 chr13 116013219 116013692 -4270620 + L1M2 LINE L1 4571 5083 -1060 1 1470 336 24 0 0 chr13 116013692 116013733 -4270579 + (TG)n Simple_repeat Simple_repeat 2 42 0 1 1470 503 294 15 0 chr13 116013733 116013869 -4270443 - B1_Mus2 SINE Alu -9 138 1 1 1470 737 311 100 38 chr13 116013869 116014077 -4270235 + L1M2 LINE L1 5084 5294 -849 1 1470 1041 74 0 0 chr13 116014817 116014952 -4269360 + B1_Mus1 SINE Alu 2 136 -12 1 1470 738 34 0 0 chr13 116014957 116015046 -4269266 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 1 1470 1030 170 67 47 chr13 116015047 116015433 -4268879 + Lx3C LINE L1 5999 6346 -663 1 1470 2104 132 5 19 chr13 116015447 116015817 -4268495 - L1_Mus4 LINE L1 0 6636 6272 1 1470 3388 92 4 2 chr13 116015817 116016284 -4268028 + L1_Mus4 LINE L1 5808 6275 -363 1 1470 482 308 86 67 chr13 116017656 116017924 -4266388 + B4A SINE B4 3 275 -17 1 1470 22 56 0 0 chr13 116018574 116018610 -4265702 + AT_rich Low_complexity Low_complexity 1 36 0 2 1470 3642 39 2 0 chr13 116018650 116019091 -4265221 - L1Md_T LINE L1 -1 6581 6140 2 1470 1308 174 15 8 chr13 116019826 116020086 -4264226 + Lx2A1 LINE L1 6745 7006 -2 2 1470 590 324 9 19 chr13 116021623 116021834 -4262478 + B3 SINE B2 2 210 -6 2 1470 618 346 201 50 chr13 116022200 116022801 -4261511 + L4 LINE RTE 733 1449 -580 2 1470 3236 66 23 0 chr13 116022801 116023240 -4261072 + Lx3_Mus LINE L1 6561 7009 0 2 1470 618 346 201 50 chr13 116023240 116023325 -4260987 + L4 LINE RTE 1450 1523 -506 2 1470 180 333 14 14 chr13 116023656 116023729 -4260583 + L2a LINE L2 3348 3420 -6 2 1470 346 296 60 36 chr13 116024367 116024535 -4259777 + RMER10A LTR ERVL 253 424 -18 2 1470 999 189 162 22 chr13 116026268 116026539 -4257773 + Lx9 LINE L1 7335 7643 -1 2 1470 259 278 35 9 chr13 116026542 116026658 -4257654 + Lx8 LINE L1 7353 7471 -2 2 1470 312 27 0 0 chr13 116028456 116028493 -4255819 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1470 637 291 50 15 chr13 116029089 116029288 -4255024 - Lx8 LINE L1 -162 7311 7106 3 1470 475 333 17 17 chr13 116029811 116029991 -4254321 - B3A SINE B2 -16 182 3 3 1470 2247 66 0 19 chr13 116030063 116030372 -4253940 - L1Md_F2 LINE L1 -3 6579 6277 3 1470 240 282 60 18 chr13 116031016 116031182 -4253130 - L1ME2z LINE L1 -6 6438 6266 3 1470 231 102 67 17 chr13 116031459 116031475 -4252837 + T-rich Low_complexity Low_complexity 49 64 0 3 1470 1263 94 0 0 chr13 116031475 116031655 -4252657 + (TTCTC)n Simple_repeat Simple_repeat 1 180 0 3 1470 231 102 67 17 chr13 116031655 116031698 -4252614 + T-rich Low_complexity Low_complexity 2 48 0 3 1470 21 36 0 0 chr13 116031734 116031762 -4252550 + AT_rich Low_complexity Low_complexity 1 28 0 3 1470 1495 48 0 0 chr13 116031762 116031948 -4252364 - L1_Mus1 LINE L1 -2 6565 6380 3 1470 252 174 0 0 chr13 116031948 116031994 -4252318 + L1_Mm LINE L1 1894 1939 -3944 4 1470 242 29 29 0 chr13 116032572 116032607 -4251705 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 4 1470 1206 54 0 0 chr13 116032625 116032772 -4251540 - B1_Mm SINE Alu 0 147 1 4 1470 214 178 22 0 chr13 116033269 116033314 -4250998 + CT-rich Low_complexity Low_complexity 3 48 0 4 1470 623 339 87 39 chr13 116034042 116034432 -4249880 + MLT1C LTR MaLR 27 435 -32 4 1470 2742 63 6 6 chr13 116034772 116035137 -4249175 + L1Md_F2 LINE L1 6216 6580 -2 4 1470 21 0 0 0 chr13 116035137 116035158 -4249154 + AT_rich Low_complexity Low_complexity 1 21 0 4 1470 405 109 0 0 chr13 116035699 116035763 -4248549 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1470 657 223 34 38 chr13 116036867 116037027 -4247285 + MT2A LTR ERVL 1 152 -381 4 1470 1198 54 0 0 chr13 116037027 116037174 -4247138 + B1_Mus2 SINE Alu 1 147 0 4 1470 830 273 149 79 chr13 116037174 116037620 -4246692 + MT2A LTR ERVL 99 550 -51 4 1470 191 88 29 0 chr13 116037630 116037664 -4246648 + (TA)n Simple_repeat Simple_repeat 1 35 0 5 1470 252 0 0 0 chr13 116037705 116037733 -4246579 + (TA)n Simple_repeat Simple_repeat 2 29 0 5 1470 348 118 0 0 chr13 116037776 116037844 -4246468 + (TATG)n Simple_repeat Simple_repeat 1 68 0 5 1470 1136 73 6 0 chr13 116037844 116038021 -4246291 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 5 1470 24 0 0 0 chr13 116038288 116038312 -4246000 + AT_rich Low_complexity Low_complexity 1 24 0 5 1470 38 22 0 0 chr13 116038432 116038477 -4245835 + AT_rich Low_complexity Low_complexity 1 45 0 5 1470 723 281 28 5 chr13 116038748 116038959 -4245353 + B3 SINE B2 1 216 0 5 1470 1119 88 0 0 chr13 116039017 116039164 -4245148 - B1_Mus2 SINE Alu 0 147 1 5 1470 449 292 7 7 chr13 116039392 116039530 -4244782 - Lx7 LINE L1 -1944 5752 5615 5 1470 423 0 0 0 chr13 116040110 116040157 -4244155 + (CA)n Simple_repeat Simple_repeat 2 48 0 5 1470 28 29 0 0 chr13 116040223 116040258 -4244054 + AT_rich Low_complexity Low_complexity 1 35 0 5 1470 764 280 18 28 chr13 116040279 116040496 -4243816 - B3 SINE B2 -1 215 1 6 1470 39 0 0 0 chr13 116040732 116040771 -4243541 + AT_rich Low_complexity Low_complexity 1 39 0 6 1470 1013 79 0 0 chr13 116041818 116041958 -4242354 - L1Md_F2 LINE L1 0 6567 6428 6 1470 5255 78 13 1 chr13 116041956 116042782 -4241530 - L1Md_F2 LINE L1 -300 6282 5447 6 1470 186 207 22 22 chr13 116043122 116043211 -4241101 + (TATG)n Simple_repeat Simple_repeat 3 91 0 6 1470 574 345 72 57 chr13 116043211 116043475 -4240837 - B4A SINE B4 0 292 25 6 1470 923 264 45 39 chr13 116046065 116046396 -4237916 + Lx9 LINE L1 7183 7515 -129 6 1470 283 366 11 11 chr13 116046482 116046576 -4237736 - PB1D10 SINE Alu -23 94 1 6 1470 258 350 21 7 chr13 116046604 116046748 -4237564 + BC1_Mm scRNA scRNA 2 147 -5 6 1470 417 231 52 0 chr13 116046779 116046904 -4237408 + L1MA4 LINE L1 5773 5930 -370 6 1470 22 0 0 0 chr13 116047060 116047082 -4237230 + AT_rich Low_complexity Low_complexity 1 22 0 6 1470 306 0 0 0 chr13 116047658 116047692 -4236620 + (TG)n Simple_repeat Simple_repeat 2 35 0 7 1470 513 0 0 0 chr13 116048237 116048294 -4236018 + (CA)n Simple_repeat Simple_repeat 2 58 0 7 1470 675 37 0 0 chr13 116048295 116048377 -4235935 + (GA)n Simple_repeat Simple_repeat 2 83 0 7 1470 184 246 0 50 chr13 116049083 116049143 -4235169 - L4 LINE RTE -1336 693 637 7 1470 491 340 54 29 chr13 116049151 116049394 -4234918 + ORR1E LTR MaLR 1 243 -127 7 1470 243 0 0 0 chr13 116050664 116050691 -4233621 + (A)n Simple_repeat Simple_repeat 1 27 0 7 1470 321 314 60 80 chr13 116051392 116051593 -4232719 + Charlie1a DNA MER1_type 349 545 -910 7 1470 1355 258 179 10 chr13 116051593 116052402 -4231910 + Lx6 LINE L1 6235 7397 -63 7 1470 505 327 86 59 chr13 116052501 116052978 -4231334 + Charlie1a DNA MER1_type 962 1451 -4 7 1470 321 266 71 41 chr13 116053285 116053383 -4230929 + B1_Mm SINE Alu 4 104 -43 7 1470 191 103 0 25 chr13 116053398 116053438 -4230874 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 1470 781 41 49 0 chr13 116054021 116054143 -4230169 - L1Md_F3 LINE L1 0 6584 6457 8 1470 917 184 79 10 chr13 116054193 116054396 -4229916 - Lx3C LINE L1 -3 6973 6757 8 1470 21 0 0 0 chr13 116055297 116055318 -4228994 + AT_rich Low_complexity Low_complexity 1 21 0 8 1470 207 100 0 0 chr13 116056973 116057003 -4227309 + (TATG)n Simple_repeat Simple_repeat 4 33 0 8 1470 551 85 12 0 chr13 116057003 116057085 -4227227 + (GA)n Simple_repeat Simple_repeat 1 83 0 8 1470 243 88 0 0 chr13 116057207 116057241 -4227071 + (TATG)n Simple_repeat Simple_repeat 4 37 0 8 1470 264 161 0 0 chr13 116057241 116057303 -4227009 + GA-rich Low_complexity Low_complexity 1 62 0 8 1470 328 283 84 50 chr13 116057303 116057422 -4226890 - RSINE1 SINE B4 -40 125 3 8 1470 456 281 164 19 chr13 116058592 116058855 -4225457 - ORR1D2 LTR MaLR 0 374 76 8 1470 804 141 114 34 chr13 116058861 116059037 -4225275 - Lx LINE L1 -18 6636 6447 8 1470 4091 116 27 0 chr13 116059036 116059848 -4224464 - Lx LINE L1 -511 6143 5309 8 1470 314 169 17 0 chr13 116059821 116059880 -4224432 + Lx LINE L1 5272 5331 -552 8 1470 332 329 99 14 chr13 116060629 116060771 -4223541 + HAL1-3A_ME LINE L1 2286 2439 -419 9 1470 339 85 0 0 chr13 116060773 116060820 -4223492 + (GAAA)n Simple_repeat Simple_repeat 3 49 0 9 1470 31 0 0 0 chr13 116062876 116062907 -4221405 + AT_rich Low_complexity Low_complexity 1 31 0 9 1470 44 46 0 0 chr13 116063298 116063363 -4220949 + AT_rich Low_complexity Low_complexity 1 65 0 9 1470 4027 72 58 26 chr13 116063374 116063960 -4220352 - L1_Mus2 LINE L1 0 6566 5962 9 1470 433 322 99 74 chr13 116063986 116064418 -4219894 + L1M4 LINE L1 2732 3174 -2972 9 1470 273 270 80 0 chr13 116064658 116064758 -4219554 + L1MD LINE L1 4008 4115 -2031 9 1470 428 292 147 54 chr13 116064781 116065060 -4219252 + L1M4 LINE L1 5415 5719 -461 9 1470 228 302 43 8 chr13 116065300 116065417 -4218895 - L1M4 LINE L1 -3712 2434 2314 9 1470 198 0 0 0 chr13 116065435 116065457 -4218855 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 9 1470 212 136 0 43 chr13 116065657 116065703 -4218609 + (TTA)n Simple_repeat Simple_repeat 3 46 0 9 1470 307 277 20 50 chr13 116065729 116065828 -4218484 - RSINE1 SINE B4 -14 151 56 1 1470 9157 77 15 16 chr13 116065828 116068077 -4216235 - L1Md_F3 LINE L1 0 7009 4700 1 1470 3834 100 6 16 chr13 116068078 116068625 -4215687 - Lx3_Mus LINE L1 -359 6650 6110 1 1470 361 205 38 25 chr13 116069027 116069107 -4215205 + Lx9 LINE L1 7297 7377 -267 1 1470 1536 198 83 8 chr13 116069109 116069495 -4214817 + Lx9 LINE L1 7229 7643 -1 1 1470 7695 51 5 20 chr13 116069729 116070722 -4213590 - L1Md_F2 LINE L1 -12 6570 5593 1 1470 21 0 0 0 chr13 116071071 116071092 -4213220 + AT_rich Low_complexity Low_complexity 1 21 0 1 1470 451 192 29 0 chr13 116071102 116071206 -4213106 + PB1D10 SINE Alu 5 111 -6 1 1470 207 195 12 38 chr13 116071235 116071315 -4212997 + GA-rich Low_complexity Low_complexity 3 80 0 1 1470 185 108 27 0 chr13 116071664 116071701 -4212611 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 1 1470 807 305 25 71 chr13 116073076 116073358 -4210954 - B4A SINE B4 0 292 24 1 1470 1136 293 110 19 chr13 116073947 116074518 -4209794 + Lx8 LINE L1 6851 7473 0 1 1470 321 26 0 0 chr13 116075038 116075076 -4209236 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1470 273 169 0 0 chr13 116075076 116075135 -4209177 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1470 252 0 0 0 chr13 116077628 116077656 -4206656 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1470 189 0 0 0 chr13 116078063 116078084 -4206228 + (A)n Simple_repeat Simple_repeat 1 21 0 1 1470 29 0 0 0 chr13 116078554 116078583 -4205729 + AT_rich Low_complexity Low_complexity 1 29 0 1 1470 8888 81 24 0 chr13 116078583 116079811 -4204501 - Lx3_Mus LINE L1 -8 7001 5744 1 1470 9074 100 34 2 chr13 116079813 116080310 -4204002 - L1_Mur1 LINE L1 -1885 4001 3492 1 1470 275 0 29 0 chr13 116080310 116080345 -4203967 + (TTTG)n Simple_repeat Simple_repeat 1 36 0 1 1470 9074 144 93 5 chr13 116080345 116081868 -4202444 - L1_Mur1 LINE L1 -2395 3491 1584 1 1470 4960 85 23 3 chr13 116081868 116082566 -4201746 - L1_Mus3 LINE L1 -1 6637 5926 1 1470 8061 125 144 2 chr13 116082566 116083357 -4200955 - L1_Mur1 LINE L1 -4297 1583 712 1 1470 1075 235 38 80 chr13 116083327 116083692 -4200620 - L1_Mur1 LINE L1 -6631 353 4 1 1470 385 221 0 0 chr13 116083876 116083953 -4200359 + Lx7 LINE L1 7252 7328 -368 1 1470 443 219 47 31 chr13 116084106 116084233 -4200079 + Lx7 LINE L1 7565 7693 -3 1 1470 23 33 0 0 chr13 116084356 116084386 -4199926 + AT_rich Low_complexity Low_complexity 1 30 0 1 1470 186 319 13 40 chr13 116084683 116084758 -4199554 - MIRb SINE MIR -14 254 182 1 1470 1949 189 18 31 chr13 116085304 116085708 -4198604 + ORR1C1 LTR MaLR 1 378 0 1 1470 2106 23 23 0 chr13 116085751 116086007 -4198305 - L1Md_F3 LINE L1 -1 6583 6322 1 1470 430 137 111 48 chr13 116086168 116086284 -4198028 + ORR1C1 LTR MaLR 243 371 -3 1 1470 1886 187 16 32 chr13 116089398 116089773 -4194539 + ORR1C2 LTR MaLR 3 371 -13 1 1470 315 239 9 179 chr13 116090136 116090190 -4194122 - B1F SINE Alu -5 144 96 1 1470 1258 96 6 0 chr13 116090190 116090368 -4193944 + L1_Mus1 LINE L1 6389 6567 0 1 1470 315 239 9 179 chr13 116090368 116090425 -4193887 - B1F SINE Alu -54 95 52 1 1470 912 224 5 20 chr13 116090451 116090647 -4193665 + Lx7 LINE L1 6197 6389 -1307 1 1470 317 386 18 24 chr13 116090866 116091033 -4193279 + MLT1G1 LTR MaLR 413 578 -1 1 1470 228 86 0 0 chr13 116091958 116091993 -4192319 + (TG)n Simple_repeat Simple_repeat 2 36 0 1 1470 456 134 0 0 chr13 116091995 116092092 -4192220 + (GA)n Simple_repeat Simple_repeat 1 97 0 1 1470 188 60 19 74 chr13 116092976 116093030 -4191282 + T-rich Low_complexity Low_complexity 5 55 0 1 1470 22 35 0 0 chr13 116093771 116093800 -4190512 + AT_rich Low_complexity Low_complexity 1 29 0 1 1470 25 0 0 0 chr13 116094094 116094119 -4190193 + AT_rich Low_complexity Low_complexity 1 25 0 1 1470 1529 271 61 111 chr13 116095420 116095775 -4188537 + Lx7 LINE L1 7015 7353 -343 1 1470 249 109 0 0 chr13 116095775 116095821 -4188491 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1470 1529 271 61 111 chr13 116095821 116095849 -4188463 + Lx7 LINE L1 7354 7354 -342 1 1470 230 0 33 0 chr13 116095849 116095879 -4188433 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1470 1529 271 61 111 chr13 116095879 116096212 -4188100 + Lx7 LINE L1 7354 7696 0 1 1470 712 281 48 24 chr13 116096930 116097095 -4187217 + B3 SINE B2 3 165 -51 1 1470 465 19 0 0 chr13 116097095 116097149 -4187163 + (TA)n Simple_repeat Simple_repeat 2 55 0 1 1470 712 281 48 24 chr13 116097149 116097191 -4187121 + B3 SINE B2 166 215 -1 1 1470 254 258 8 0 chr13 116097457 116097589 -4186723 + (TA)n Simple_repeat Simple_repeat 2 134 0 1 1470 857 127 17 17 chr13 116099837 116100013 -4184299 + (TCTA)n Simple_repeat Simple_repeat 3 178 0 1 1470 21 71 0 0 chr13 116101615 116101657 -4182655 + AT_rich Low_complexity Low_complexity 1 42 0 1 1470 397 248 119 0 chr13 116102801 116102902 -4181410 + PB1D7 SINE Alu 3 115 -5 1 1470 189 68 44 22 chr13 116103107 116103152 -4181160 + (TTTTG)n Simple_repeat Simple_repeat 4 49 0 1 1470 701 78 0 0 chr13 116103647 116103737 -4180575 - L1_Mus4 LINE L1 -182 6454 6365 1 1470 1134 75 12 6 chr13 116103737 116103910 -4180402 + L1_Mus4 LINE L1 6459 6632 -4 1 1470 338 302 16 32 chr13 116104030 116104153 -4180159 + Lx8 LINE L1 6170 6290 -1183 1 1470 346 338 32 19 chr13 116104189 116104343 -4179969 + Lx8 LINE L1 7050 7205 -268 1 1470 839 226 108 25 chr13 116104341 116104581 -4179731 + Lx7 LINE L1 7054 7313 -383 1 1470 226 328 0 0 chr13 116106353 116106417 -4177895 - L2a LINE L2 -1 3425 3362 1 1470 396 0 0 0 chr13 116106990 116107034 -4177278 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1 1470 2016 110 30 0 chr13 116107036 116107336 -4176976 - Lx3A LINE L1 -34 6947 6639 1 1470 2358 79 0 3 chr13 116107331 116107661 -4176651 - L1_Mur1 LINE L1 -789 5097 4769 1 1470 557 38 25 0 chr13 116107701 116107780 -4176532 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1 1470 523 280 78 22 chr13 116107794 116107973 -4176339 - B3 SINE B2 -19 197 9 1 1470 499 281 83 31 chr13 116108011 116108301 -4176011 - L1MB1 LINE L1 -313 5855 5551 1 1470 651 305 177 9 chr13 116108629 116109311 -4175001 - L1MB1 LINE L1 -1577 4563 3767 1 1470 369 62 0 0 chr13 116109731 116109779 -4174533 + (CAA)n Simple_repeat Simple_repeat 1 48 0 1 1470 514 360 85 19 chr13 116110640 116110898 -4173414 + MER54A LTR ERVL 71 345 -556 1 1470 296 264 25 68 chr13 116111436 116111554 -4172758 - MLT1B LTR MaLR -200 190 78 1 1470 348 387 21 5 chr13 116111788 116111975 -4172337 - L1MC4 LINE L1 -1045 6997 6808 1 1470 459 360 114 60 chr13 116113474 116114303 -4170009 + L1MDa LINE L1 346 1290 -5343 1 1470 531 0 0 0 chr13 116114729 116114788 -4169524 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1470 447 19 0 0 chr13 116114788 116114839 -4169473 + (TA)n Simple_repeat Simple_repeat 2 53 0 1 1470 22 35 0 0 chr13 116115074 116115103 -4169209 + AT_rich Low_complexity Low_complexity 1 29 0 1 1470 224 143 40 20 chr13 116115616 116115666 -4168646 + CT-rich Low_complexity Low_complexity 2 52 0 1 1470 288 298 32 32 chr13 116116103 116116251 -4168061 + RMER17D LTR ERVK 337 484 -405 1 1470 270 169 48 48 chr13 116116251 116116313 -4167999 + B2_Mm2 SINE B2 2 63 -132 1 1470 393 241 0 0 chr13 116116383 116116462 -4167850 + B1_Mur4 SINE Alu 1 79 -71 1 1470 414 0 0 0 chr13 116116462 116116508 -4167804 + (TAAA)n Simple_repeat Simple_repeat 3 48 0 1 1470 315 49 0 0 chr13 116116558 116116599 -4167713 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1 1470 2152 128 0 3 chr13 116117227 116117548 -4166764 + Lx LINE L1 6324 6643 -11 1 1470 287 0 0 50 chr13 116117549 116117589 -4166723 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1 1470 244 315 73 18 chr13 116119423 116119533 -4164779 + MER5A1 DNA MER1_type 48 163 -3 1 1470 864 146 0 0 chr13 116120393 116120530 -4163782 - URR1B DNA MER1_type 0 225 89 1 1470 7425 60 28 3 chr13 116121907 116122935 -4161377 + L1_Mus2 LINE L1 5512 6565 -1 1 1470 31680 94 14 18 chr13 116124005 116127992 -4156320 + L1Md_F2 LINE L1 217 4179 -1704 1 1470 3226 34 5 40 chr13 116127992 116128418 -4155894 - IAPLTR2a LTR ERVK 0 411 1 1 183 31680 77 5 12 chr13 116128418 116129821 -4154491 + L1Md_F2 LINE L1 4180 5586 -297 1 1471 7174 88 15 2 chr13 116129821 116130800 -4153512 + L1Md_F2 LINE L1 5587 6578 -4 1 1471 228 35 0 0 chr13 116130829 116130858 -4153454 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 1 1471 294 29 0 0 chr13 116131021 116131056 -4153256 + (A)n Simple_repeat Simple_repeat 1 35 0 1 1471 650 263 13 49 chr13 116133521 116133745 -4150567 - B3 SINE B2 0 216 1 1 1471 681 112 362 12 chr13 116133854 116134017 -4150295 + URR1A DNA MER1_type 1 220 -6 1 1471 1101 75 0 0 chr13 116135179 116135326 -4148986 - L1_Mus1 LINE L1 0 6567 6421 1 1471 447 19 0 0 chr13 116135402 116135454 -4148858 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1471 400 297 62 17 chr13 116135626 116135804 -4148508 - L1MA6 LINE L1 -242 6058 5873 1 1471 183 129 0 0 chr13 116138245 116138276 -4146036 + (TA)n Simple_repeat Simple_repeat 2 32 0 1 1471 569 222 19 0 chr13 116140014 116140122 -4144190 - B1_Mus1 SINE Alu -34 114 5 1 1471 30 0 0 0 chr13 116140140 116140170 -4144142 + AT_rich Low_complexity Low_complexity 1 30 0 1 1471 1630 45 0 5 chr13 116140543 116140743 -4143569 + L1Md_F2 LINE L1 5388 5586 -297 1 1471 8130 39 3 2 chr13 116140743 116141735 -4142577 + L1Md_F2 LINE L1 5587 6579 -3 1 1471 574 232 9 0 chr13 116142347 116142459 -4141853 - B1_Mm SINE Alu -27 120 8 1 1471 358 167 115 19 chr13 116142480 116142584 -4141728 - Lx9 LINE L1 -9 7635 7522 1 1471 1497 201 66 3 chr13 116142594 116142898 -4141414 + RLTR30 LTR ERV1 1 323 -56 1 1471 195 129 0 0 chr13 116142898 116142929 -4141383 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 1 1471 396 0 0 0 chr13 116142946 116142990 -4141322 + (CA)n Simple_repeat Simple_repeat 1 44 0 1 1471 874 159 12 19 chr13 116143010 116143170 -4141142 - Lx9 LINE L1 -179 7465 7307 1 1471 22 0 0 0 chr13 116143175 116143197 -4141115 + AT_rich Low_complexity Low_complexity 1 22 0 1 1471 198 0 0 0 chr13 116143718 116143740 -4140572 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 1 1471 251 237 211 45 chr13 116143888 116144087 -4140225 - Charlie1 DNA MER1_type -6 2775 2544 1 1471 238 283 156 28 chr13 116144160 116144269 -4140043 - Charlie1 DNA MER1_type -2622 159 37 1 1471 312 171 142 9 chr13 116144537 116144643 -4139669 - Lx9 LINE L1 -1 7643 7524 1 1471 414 0 0 0 chr13 116144650 116144696 -4139616 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1471 1957 231 80 19 chr13 116144698 116145236 -4139076 - Lx9 LINE L1 -159 7485 6915 1 1471 267 400 0 16 chr13 116146234 116146356 -4137956 - PB1D7 SINE Alu 0 120 1 1 1471 23 33 0 0 chr13 116146364 116146394 -4137918 + AT_rich Low_complexity Low_complexity 1 30 0 1 1471 475 309 0 31 chr13 116146638 116146768 -4137544 + B3A SINE B2 70 195 -3 2 1471 22 70 0 0 chr13 116146895 116146938 -4137374 + AT_rich Low_complexity Low_complexity 1 43 0 2 1471 180 125 0 0 chr13 116148134 116148166 -4136146 + (TG)n Simple_repeat Simple_repeat 2 33 0 2 1471 3392 206 34 8 chr13 116148241 116148910 -4135402 + Lx5 LINE L1 6364 7050 0 2 1471 494 259 37 0 chr13 116148993 116149101 -4135211 - B3A SINE B2 -86 112 1 2 1471 414 345 57 29 chr13 116149258 116149467 -4134845 + Lx8 LINE L1 6680 6894 -579 2 1471 534 31 0 0 chr13 116149519 116149583 -4134729 + (GA)n Simple_repeat Simple_repeat 2 65 0 2 1471 230 266 82 70 chr13 116149655 116149898 -4134414 + Lx9 LINE L1 7398 7643 -1 2 1471 2515 175 59 10 chr13 116150074 116150582 -4133730 - Lx LINE L1 -43 6611 6079 2 1471 270 392 23 60 chr13 116150660 116150877 -4133435 - MLT1G LTR MaLR -195 396 188 2 1471 276 291 12 37 chr13 116151046 116151128 -4133184 + RSINE1 SINE B4 1 80 -85 2 1471 312 176 0 0 chr13 116151128 116151196 -4133116 + (CA)n Simple_repeat Simple_repeat 1 68 0 2 1471 645 157 0 19 chr13 116151238 116151394 -4132918 + (TG)n Simple_repeat Simple_repeat 2 154 0 2 1471 463 211 45 55 chr13 116151394 116151504 -4132808 - B1_Mur2 SINE Alu -20 129 21 2 1471 181 304 14 14 chr13 116152260 116152330 -4131982 - MIR3 SINE MIR 0 208 139 2 1471 1814 313 72 28 chr13 116152871 116153772 -4130540 + Lx9 LINE L1 6660 7600 -44 2 1471 243 295 0 0 chr13 116154072 116154133 -4130179 - MER58D DNA MER1_type -50 336 276 2 1471 663 228 7 7 chr13 116154449 116154461 -4129851 - B1_Mur4 SINE Alu -1 149 138 2 1471 293 0 27 0 chr13 116154461 116154498 -4129814 + (TTTTG)n Simple_repeat Simple_repeat 1 38 0 2 1471 663 228 7 7 chr13 116154498 116154622 -4129690 - B1_Mur4 SINE Alu -13 137 13 2 1471 30 69 0 0 chr13 116155237 116155295 -4129017 + AT_rich Low_complexity Low_complexity 1 58 0 2 1471 3192 37 2 62 chr13 116155620 116156057 -4128255 + IAPLTR2a LTR ERVK 1 411 0 2 1471 2165 60 30 20 chr13 116158003 116158307 -4126005 - IAPLTR2b LTR ERVK -20 307 1 2 1471 7878 81 6 1 chr13 116158343 116159473 -4124839 + L1_Mus3 LINE L1 5496 6631 -7 2 1471 21 71 0 0 chr13 116159498 116159540 -4124772 + AT_rich Low_complexity Low_complexity 1 42 0 2 1471 1087 90 0 0 chr13 116159686 116159831 -4124481 + B1_Mus2 SINE Alu 1 145 -2 2 1471 29 60 0 0 chr13 116160418 116160468 -4123844 + AT_rich Low_complexity Low_complexity 1 50 0 2 1471 825 243 120 20 chr13 116160586 116160944 -4123368 - Lx9 LINE L1 -153 7491 7098 2 1471 2869 147 35 20 chr13 116160950 116161443 -4122869 + Lx2 LINE L1 6498 6997 0 2 1471 2172 93 0 10 chr13 116161450 116161754 -4122558 + L1Md_F2 LINE L1 6219 6519 -63 2 1471 1763 247 103 10 chr13 116161766 116161987 -4122325 - Lx9 LINE L1 -550 7094 6846 2 1471 1491 207 144 3 chr13 116161987 116162356 -4121956 - MTC LTR MaLR 0 421 1 2 1471 1763 247 103 10 chr13 116162356 116162641 -4121671 - Lx9 LINE L1 -799 6845 6541 2 1471 253 286 11 0 chr13 116163638 116163729 -4120583 + (TCTA)n Simple_repeat Simple_repeat 4 95 0 2 1471 413 248 201 0 chr13 116163783 116163932 -4120380 - B3A SINE B2 -19 179 1 2 1471 385 321 59 42 chr13 116164440 116164687 -4119625 - MIRc SINE MIR -13 255 1 2 1471 288 77 0 0 chr13 116164784 116164823 -4119489 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 2 1471 369 0 0 0 chr13 116164823 116164863 -4119449 + (CA)n Simple_repeat Simple_repeat 2 42 0 2 1471 740 276 16 45 chr13 116165224 116165479 -4118833 - MTE2a LTR MaLR -4 375 7 2 1471 240 295 13 0 chr13 116165742 116165820 -4118492 + ID4 SINE ID 2 80 -3 2 1471 270 212 22 61 chr13 116165842 116166023 -4118289 + (TAAA)n Simple_repeat Simple_repeat 4 177 0 2 1471 354 116 60 20 chr13 116167147 116167297 -4117015 + (TA)n Simple_repeat Simple_repeat 1 156 0 2 1471 567 96 0 0 chr13 116167355 116167438 -4116874 + (TA)n Simple_repeat Simple_repeat 1 83 0 2 1471 225 100 0 130 chr13 116167477 116167523 -4116789 + L1Md_A LINE L1 6158 6197 -385 2 1471 297 128 0 0 chr13 116167491 116167538 -4116774 + L1_Mus2 LINE L1 6160 6206 -360 2 1471 204 185 42 42 chr13 116168797 116168893 -4115419 + (TA)n Simple_repeat Simple_repeat 1 96 0 2 1471 262 122 43 43 chr13 116168938 116169032 -4115280 + (TAGA)n Simple_repeat Simple_repeat 4 97 0 2 1471 22 0 0 0 chr13 116169861 116169883 -4114429 + AT_rich Low_complexity Low_complexity 1 22 0 2 1471 4225 189 64 2 chr13 116171008 116171120 -4113192 + Lx5 LINE L1 5892 6003 -1047 2 1471 2671 22 3 6 chr13 116171120 116171434 -4112878 + L1Md_F2 LINE L1 6249 6562 -20 2 1471 468 0 0 0 chr13 116171434 116171486 -4112826 + (TA)n Simple_repeat Simple_repeat 2 53 0 2 1471 4225 189 64 2 chr13 116171494 116172175 -4112137 + Lx5 LINE L1 6004 6733 -317 2 1471 409 243 73 7 chr13 116174176 116174313 -4109999 + L1MA8 LINE L1 6131 6276 -15 2 1471 534 190 64 169 chr13 116174522 116174788 -4109524 + RMER17C LTR ERVK 36 273 -137 2 1471 878 52 9 0 chr13 116174788 116174904 -4109408 + (GAAA)n Simple_repeat Simple_repeat 1 117 0 2 1471 237 222 34 120 chr13 116174904 116174948 -4109364 + RMER17C LTR ERVK 477 523 -366 2 1471 3913 172 11 4 chr13 116175430 116176143 -4108169 - L1_Mur1 LINE L1 -305 5581 4864 2 1471 1019 115 18 0 chr13 116176136 116176301 -4108011 - L1_Mur1 LINE L1 -1298 4579 4412 2 1471 1105 126 23 11 chr13 116176317 116176493 -4107819 + B2_Mm1t SINE B2 2 179 -14 2 1471 343 95 340 19 chr13 116176544 116176650 -4107662 + B2_Mm2 SINE B2 47 186 -9 2 1471 335 74 0 0 chr13 116176651 116176705 -4107607 - L1_Mur1 LINE L1 -1499 4378 4325 2 1471 1740 123 50 0 chr13 116176716 116176993 -4107319 + Lx5 LINE L1 5589 5879 -1171 2 1471 2005 207 58 19 chr13 116176984 116177466 -4106846 + Lx2B LINE L1 6498 6998 -2 2 1471 219 36 0 0 chr13 116180324 116180352 -4103960 + (TG)n Simple_repeat Simple_repeat 1 28 0 2 1471 180 0 0 0 chr13 116180365 116180385 -4103927 + (CA)n Simple_repeat Simple_repeat 2 21 0 2 1471 321 355 55 65 chr13 116180385 116180576 -4103736 - ID_B1 SINE B4 -31 193 4 2 1471 2190 167 20 8 chr13 116181018 116181416 -4102896 + Lx LINE L1 6244 6646 -8 2 1471 189 0 0 0 chr13 116181418 116181439 -4102873 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2 1471 436 250 17 33 chr13 116181450 116181570 -4102742 + RLTR14 LTR ERV1 263 380 -2 2 1471 351 336 45 13 chr13 116182230 116182384 -4101928 - MLT1A LTR MaLR -14 360 202 2 1471 794 257 40 0 chr13 116182976 116183178 -4101134 - B3 SINE B2 -3 213 4 2 1471 895 248 14 5 chr13 116183471 116183694 -4100618 - URR1B DNA MER1_type 0 225 1 2 1471 230 320 0 0 chr13 116184036 116184114 -4100198 + (CA)n Simple_repeat Simple_repeat 1 78 0 2 1471 280 302 0 0 chr13 116186059 116186122 -4098190 + polypurine Low_complexity Low_complexity 5 67 0 2 1471 23 33 0 0 chr13 116186141 116186171 -4098141 + AT_rich Low_complexity Low_complexity 1 30 0 2 1471 3475 273 36 18 chr13 116186310 116187224 -4097088 + Lx7 LINE L1 6437 7367 -329 2 1471 1128 199 65 26 chr13 116187294 116187603 -4096709 + Lx7 LINE L1 7376 7696 0 2 1471 633 301 25 111 chr13 116188246 116188359 -4095953 + Charlie1a DNA MER1_type 387 485 -970 2 1471 2420 137 34 2 chr13 116188359 116188768 -4095544 + BGLII_Mus LTR ERVK 1 422 0 2 1471 633 301 25 111 chr13 116188768 116189013 -4095299 + Charlie1a DNA MER1_type 486 714 -741 2 1471 2783 54 0 0 chr13 116189034 116189385 -4094927 - L1Md_F2 LINE L1 -12 6570 6220 2 1471 272 385 0 0 chr13 116189398 116189502 -4094810 + B3 SINE B2 1 104 -112 2 1471 721 115 10 0 chr13 116189496 116189600 -4094712 + BGLII_Mus LTR ERVK 60 164 -258 2 1471 203 171 0 0 chr13 116189646 116189681 -4094631 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2 1471 395 277 53 57 chr13 116189716 116189961 -4094351 + Charlie1a DNA MER1_type 762 1005 -450 2 1471 264 301 62 47 chr13 116190476 116190605 -4093707 + LTR84a LTR ERVL 631 761 0 2 1471 23 0 0 0 chr13 116192083 116192106 -4092206 + AT_rich Low_complexity Low_complexity 1 23 0 2 1471 424 260 71 0 chr13 116192144 116192298 -4092014 - L1MA8 LINE L1 -22 6269 6105 2 1471 231 61 0 0 chr13 116192389 116192422 -4091890 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1471 21 0 0 0 chr13 116192856 116192877 -4091435 + AT_rich Low_complexity Low_complexity 1 21 0 2 1471 246 164 129 16 chr13 116194705 116194767 -4089545 - RMER3D4 LTR ERVK -349 234 166 2 1471 615 233 16 0 chr13 116195129 116195258 -4089054 + B3 SINE B2 2 132 -84 2 1471 306 87 0 0 chr13 116195271 116195317 -4088995 + (CAAA)n Simple_repeat Simple_repeat 1 46 0 2 1471 24 0 0 0 chr13 116195887 116195911 -4088401 + AT_rich Low_complexity Low_complexity 1 24 0 2 1471 192 354 122 47 chr13 116196945 116197117 -4087195 - MIRc SINE MIR -58 210 26 2 1471 243 0 0 0 chr13 116197573 116197600 -4086712 + (TA)n Simple_repeat Simple_repeat 1 27 0 2 1471 225 119 0 0 chr13 116197703 116197745 -4086567 + (GA)n Simple_repeat Simple_repeat 2 43 0 2 1471 722 276 29 24 chr13 116197841 116198049 -4086263 - B3 SINE B2 -6 210 2 2 1471 315 302 173 42 chr13 116198567 116198902 -4085410 - L1MC4 LINE L1 -633 7409 7031 2 1471 180 0 0 0 chr13 116199052 116199072 -4085240 + (TA)n Simple_repeat Simple_repeat 2 21 0 2 1471 189 0 0 0 chr13 116200993 116201014 -4083298 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1471 616 24 24 0 chr13 116201908 116201990 -4082322 + (GA)n Simple_repeat Simple_repeat 1 84 0 2 1471 2122 155 22 19 chr13 116203105 116203473 -4080839 - Lx4A LINE L1 -1 7057 6689 2 1471 619 162 0 62 chr13 116203488 116203633 -4080679 - Lx2B LINE L1 0 7000 6865 2 1471 208 143 0 0 chr13 116203978 116204013 -4080299 + (A)n Simple_repeat Simple_repeat 1 35 0 2 1471 225 0 0 0 chr13 116204858 116204883 -4079429 + (TC)n Simple_repeat Simple_repeat 2 26 0 2 1471 682 227 0 52 chr13 116205222 116205357 -4078955 - B1_Mur1 SINE Alu -3 146 19 2 1471 452 296 7 56 chr13 116205236 116205379 -4078933 - ID_B1 SINE B4 -10 214 79 2 1471 193 237 43 18 chr13 116205609 116205673 -4078639 - MIRb SINE MIR -12 264 196 2 1471 322 100 0 0 chr13 116205914 116205964 -4078348 + L1_Mus2 LINE L1 6517 6566 0 2 1471 1122 236 99 54 chr13 116206912 116207266 -4077046 + ORR1D2 LTR MaLR 1 370 0 2 1471 192 241 0 0 chr13 116207480 116207538 -4076774 + (TG)n Simple_repeat Simple_repeat 2 59 0 3 1471 236 120 0 20 chr13 116210777 116210828 -4073484 + (TA)n Simple_repeat Simple_repeat 1 50 0 3 1471 224 297 138 54 chr13 116211569 116211736 -4072576 + MIRb SINE MIR 24 204 -64 3 1471 21 0 0 0 chr13 116212003 116212024 -4072288 + AT_rich Low_complexity Low_complexity 1 21 0 3 1471 22 0 0 0 chr13 116212161 116212183 -4072129 + AT_rich Low_complexity Low_complexity 1 22 0 3 1471 207 194 0 0 chr13 116212293 116212329 -4071983 + (CATA)n Simple_repeat Simple_repeat 3 38 0 3 1471 707 187 0 6 chr13 116212335 116212512 -4071800 + (CA)n Simple_repeat Simple_repeat 1 176 0 3 1471 922 164 119 43 chr13 116212528 116212738 -4071574 + URR1A DNA MER1_type 1 226 0 3 1471 384 300 10 0 chr13 116214043 116214143 -4070169 - B1F2 SINE Alu -45 104 4 3 1471 552 290 21 0 chr13 116215330 116215475 -4068837 + Lx8 LINE L1 7178 7325 -148 3 1471 432 0 0 0 chr13 116215477 116215525 -4068787 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1471 204 235 20 0 chr13 116218206 116218257 -4066055 + GA-rich Low_complexity Low_complexity 4 55 0 3 1471 417 39 0 0 chr13 116218280 116218331 -4065981 + (GAAA)n Simple_repeat Simple_repeat 2 52 0 3 1471 441 0 0 0 chr13 116218439 116218488 -4065824 + (TC)n Simple_repeat Simple_repeat 2 50 0 3 1471 378 0 0 0 chr13 116218488 116218529 -4065783 + (TG)n Simple_repeat Simple_repeat 1 42 0 3 1471 744 196 0 0 chr13 116220651 116220830 -4063482 + (TA)n Simple_repeat Simple_repeat 1 179 0 3 1471 455 285 120 49 chr13 116220873 116221139 -4063173 - L1MA7 LINE L1 -143 6148 5864 3 1471 5473 101 13 24 chr13 116221191 116222637 -4061675 + L1VL4 LINE L1 259 1705 -1854 3 1471 1871 110 10 0 chr13 116222662 116222962 -4061350 + L1VL4 LINE L1 2631 2933 -626 3 1471 426 69 0 0 chr13 116223034 116223092 -4061220 + (TTA)n Simple_repeat Simple_repeat 1 58 0 3 1471 3838 127 30 5 chr13 116223092 116223693 -4060619 + Lx2 LINE L1 6372 6987 -10 3 1471 318 98 0 0 chr13 116223708 116223769 -4060543 + L1VL4 LINE L1 3497 3557 -2 3 1471 496 267 16 32 chr13 116223789 116223913 -4060399 + RSINE1 SINE B4 44 165 0 3 1471 363 311 117 6 chr13 116223973 116224135 -4060177 - L2 LINE L2 -1668 1751 1572 3 1471 23 0 0 0 chr13 116224307 116224330 -4059982 + AT_rich Low_complexity Low_complexity 1 23 0 3 1471 993 41 0 0 chr13 116225647 116225769 -4058543 + (GAAA)n Simple_repeat Simple_repeat 3 124 0 3 1471 4913 49 8 0 chr13 116228348 116228957 -4055355 + L1Md_F3 LINE L1 5955 6568 -16 3 1471 3116 51 15 10 chr13 116229251 116229649 -4054663 + MTB LTR MaLR 1 400 0 3 1471 23 0 0 0 chr13 116229990 116230013 -4054299 + AT_rich Low_complexity Low_complexity 1 23 0 3 1471 233 229 0 0 chr13 116230095 116230143 -4054169 + (CATATA)n Simple_repeat Simple_repeat 3 50 0 3 1471 232 274 51 64 chr13 116230178 116230256 -4054056 - B3A SINE B2 -17 181 105 3 1471 21 0 0 0 chr13 116230390 116230411 -4053901 + AT_rich Low_complexity Low_complexity 1 21 0 3 1471 324 0 0 0 chr13 116230751 116230787 -4053525 + (TG)n Simple_repeat Simple_repeat 2 37 0 3 1471 452 360 13 20 chr13 116232133 116232286 -4052026 - RSINE1 SINE B4 -2 163 12 3 1471 22 35 0 0 chr13 116232295 116232324 -4051988 + AT_rich Low_complexity Low_complexity 1 29 0 3 1471 1028 360 105 44 chr13 116232540 116233002 -4051310 - Lx8 LINE L1 -251 7222 6709 3 1471 1835 72 0 8 chr13 116233002 116233374 -4050938 - L1_Mus1 LINE L1 0 6567 6308 3 1471 1028 360 105 44 chr13 116233374 116233769 -4050543 - Lx8 LINE L1 -765 6708 6317 3 1471 359 272 0 64 chr13 116233888 116233998 -4050314 - BC1_Mm scRNA scRNA -48 104 2 3 1471 363 301 24 24 chr13 116234006 116234132 -4050180 - ID_B1 SINE B4 -2 222 97 3 1471 286 326 43 22 chr13 116234147 116234332 -4049980 - L1MA6 LINE L1 -121 6179 5991 3 1471 23 0 0 0 chr13 116234994 116235017 -4049295 + AT_rich Low_complexity Low_complexity 1 23 0 3 1471 528 45 0 0 chr13 116235582 116235649 -4048663 + (TG)n Simple_repeat Simple_repeat 2 68 0 3 1471 1120 126 99 0 chr13 116237230 116237421 -4046891 - Lx LINE L1 -4 6650 6441 3 1471 21 36 0 0 chr13 116239587 116239615 -4044697 + AT_rich Low_complexity Low_complexity 1 28 0 3 1471 947 179 179 0 chr13 116239700 116239890 -4044422 + URR1B DNA MER1_type 2 225 0 3 1471 537 335 19 0 chr13 116240127 116240285 -4044027 - RSINE1 SINE B4 -2 163 3 3 1471 28 0 0 0 chr13 116241009 116241037 -4043275 + AT_rich Low_complexity Low_complexity 1 28 0 3 1471 1826 96 30 4 chr13 116241042 116241304 -4043008 - Lx3A LINE L1 -5 6976 6708 3 1471 306 0 0 0 chr13 116241449 116241483 -4042829 + (TG)n Simple_repeat Simple_repeat 2 35 0 3 1471 511 191 0 11 chr13 116242835 116242930 -4041382 + B1_Mus2 SINE Alu 48 141 -6 3 1471 279 0 0 0 chr13 116243165 116243196 -4041116 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1471 186 103 0 0 chr13 116243478 116243507 -4040805 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3 1471 30 59 0 0 chr13 116244138 116244189 -4040123 + AT_rich Low_complexity Low_complexity 1 51 0 3 1471 996 157 26 0 chr13 116244831 116245022 -4039290 - RMER6C LTR ERVK -3 687 492 3 1471 647 291 168 17 chr13 116245212 116245509 -4038803 + MTD LTR MaLR 78 419 0 3 1471 667 260 129 97 chr13 116245517 116245858 -4038454 + MTE2a LTR MaLR 2 353 -26 3 1471 22 0 0 0 chr13 116246920 116246942 -4037370 + AT_rich Low_complexity Low_complexity 1 22 0 3 1471 21 0 0 0 chr13 116247091 116247112 -4037200 + AT_rich Low_complexity Low_complexity 1 21 0 3 1471 314 278 140 12 chr13 116247126 116247290 -4037022 + L1M3c LINE L1 1378 1562 -4579 3 1471 534 341 56 13 chr13 116247391 116247787 -4036525 + L1M4c LINE L1 1404 1887 -4591 3 1471 578 60 0 12 chr13 116247866 116247950 -4036362 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 3 1471 683 286 122 13 chr13 116248284 116248734 -4035578 + L1M4c LINE L1 2346 2844 -3532 3 1471 294 95 0 0 chr13 116248816 116248858 -4035454 + (TA)n Simple_repeat Simple_repeat 1 42 0 3 1471 228 291 0 12 chr13 116248951 116249031 -4035281 + L1M4c LINE L1 3001 3079 -3297 3 1471 378 0 0 0 chr13 116249727 116249769 -4034543 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1471 1878 221 3 23 chr13 116249806 116250191 -4034121 - Lx5 LINE L1 -535 6515 6139 3 1471 1796 220 88 38 chr13 116250218 116250695 -4033617 + Lx5 LINE L1 6545 7045 -5 3 1471 873 293 72 74 chr13 116250698 116251803 -4032509 + L1M4c LINE L1 3344 4446 -1930 3 1471 435 299 192 0 chr13 116251784 116251998 -4032314 + Lx8 LINE L1 6291 6545 -928 3 1471 233 274 119 0 chr13 116252206 116252290 -4032022 + L1_Mur1 LINE L1 796 889 -6093 3 1471 9069 158 8 22 chr13 116252365 116254439 -4029873 + L1_Mur1 LINE L1 870 2916 -996 3 1471 599 295 142 37 chr13 116254490 116254842 -4029470 - Lx8 LINE L1 -7 7466 7078 3 1471 33 0 0 0 chr13 116258609 116258642 -4025670 + AT_rich Low_complexity Low_complexity 1 33 0 3 1471 432 234 174 23 chr13 116258760 116258979 -4025333 - Lx9 LINE L1 -9 7635 7384 3 1471 181 338 90 62 chr13 116259012 116259157 -4025155 + MER5B DNA MER1_type 27 175 -3 3 1471 408 237 32 81 chr13 116259711 116259835 -4024477 + RSINE1 SINE B4 3 120 -45 3 1471 432 0 0 0 chr13 116259835 116259883 -4024429 + (CA)n Simple_repeat Simple_repeat 2 49 0 3 1471 194 123 61 15 chr13 116260095 116260161 -4024151 + GA-rich Low_complexity Low_complexity 4 72 0 3 1471 348 24 0 0 chr13 116260326 116260367 -4023945 + (CA)n Simple_repeat Simple_repeat 2 42 0 3 183 3244 75 2 0 chr13 116260816 116261232 -4023080 + L1_Mus1 LINE L1 6151 6567 0 3 1472 30 27 0 0 chr13 116261329 116261366 -4022946 + AT_rich Low_complexity Low_complexity 1 37 0 3 1472 480 48 0 0 chr13 116261376 116261439 -4022873 + (TG)n Simple_repeat Simple_repeat 1 63 0 3 1472 342 320 195 0 chr13 116261448 116261576 -4022736 - RSINE1 SINE B4 -1 164 12 3 1472 261 338 69 41 chr13 116261580 116261880 -4022432 + MLT1A0 LTR MaLR 33 387 -21 3 1472 1058 324 101 8 chr13 116262259 116262736 -4021576 + Lx8 LINE L1 6763 7283 -190 3 1472 495 0 0 0 chr13 116263759 116263814 -4020498 + (CA)n Simple_repeat Simple_repeat 2 56 0 3 1472 651 324 16 0 chr13 116264790 116264972 -4019340 + B4A SINE B4 2 186 -106 3 1472 385 252 101 80 chr13 116265055 116265331 -4018981 + RMER10A LTR ERVL 1 282 -160 3 1472 216 0 0 0 chr13 116265665 116265689 -4018623 + (TAA)n Simple_repeat Simple_repeat 3 26 0 3 1472 36 40 0 0 chr13 116265858 116265908 -4018404 + AT_rich Low_complexity Low_complexity 1 50 0 3 1472 399 41 0 0 chr13 116266108 116266157 -4018155 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1472 29 28 0 0 chr13 116266905 116266941 -4017371 + AT_rich Low_complexity Low_complexity 1 36 0 3 1472 242 73 0 24 chr13 116267445 116267487 -4016825 + (CAA)n Simple_repeat Simple_repeat 1 41 0 3 1472 24 0 0 0 chr13 116268777 116268801 -4015511 + AT_rich Low_complexity Low_complexity 1 24 0 3 1472 24305 103 25 0 chr13 116268833 116273256 -4011056 + L1_Mus1 LINE L1 2027 6565 -2 3 1472 1170 256 71 14 chr13 116273258 116273611 -4010701 + Lx9 LINE L1 6635 7007 -637 3 1472 240 59 0 0 chr13 116274384 116274418 -4009894 + (T)n Simple_repeat Simple_repeat 1 34 0 3 1472 467 33 0 16 chr13 116275271 116275333 -4008979 + (TTA)n Simple_repeat Simple_repeat 2 62 0 3 1472 387 0 0 0 chr13 116276875 116276918 -4007394 + (TA)n Simple_repeat Simple_repeat 1 43 0 3 1472 1126 194 5 19 chr13 116277401 116277616 -4006696 + RLTR20A LTR ERVK 3 214 -327 3 1472 7253 110 11 9 chr13 116277616 116279315 -4004997 + Lx LINE L1 4851 6556 -98 3 1472 1324 243 50 55 chr13 116279315 116279640 -4004672 + RLTR20A LTR ERVK 126 439 -102 3 1472 527 53 0 13 chr13 116279640 116279716 -4004596 + (TG)n Simple_repeat Simple_repeat 1 75 0 3 1472 1324 243 50 55 chr13 116279716 116279808 -4004504 + RLTR20A LTR ERVK 440 541 0 3 1472 289 193 36 0 chr13 116279824 116279907 -4004405 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 3 1472 1239 71 0 0 chr13 116280719 116281005 -4003307 + (TG)n Simple_repeat Simple_repeat 1 286 0 3 1472 1160 134 0 0 chr13 116281341 116281513 -4002799 - B2_Mm2 SINE B2 -22 173 2 3 1472 1060 315 11 0 chr13 116281713 116281989 -4002323 - B4 SINE B4 -12 280 2 4 1472 372 133 0 0 chr13 116282974 116283034 -4001278 + (GGA)n Simple_repeat Simple_repeat 2 61 0 4 1472 246 278 40 40 chr13 116283199 116283274 -4001038 - PB1 SINE Alu -52 75 1 4 1472 22 35 0 0 chr13 116283473 116283502 -4000810 + AT_rich Low_complexity Low_complexity 1 29 0 4 1472 333 0 0 0 chr13 116283797 116283834 -4000478 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1472 330 26 0 0 chr13 116284245 116284284 -4000028 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1472 478 272 80 14 chr13 116285262 116285400 -3998912 + B1_Mur2 SINE Alu 1 147 -2 4 1472 441 0 0 0 chr13 116285585 116285634 -3998678 + (CA)n Simple_repeat Simple_repeat 2 50 0 4 1472 283 301 11 0 chr13 116286016 116286109 -3998203 - Lx9 LINE L1 -691 6953 6860 4 1472 266 240 107 0 chr13 116286083 116286158 -3998154 + Lx9 LINE L1 7090 7172 -472 4 1472 429 70 0 0 chr13 116286326 116286383 -3997929 + (CA)n Simple_repeat Simple_repeat 2 58 0 4 1472 32 0 0 0 chr13 116286403 116286435 -3997877 + AT_rich Low_complexity Low_complexity 1 32 0 4 1472 345 252 0 0 chr13 116286437 116286536 -3997776 - Lx6 LINE L1 -34 7426 7328 4 1472 863 162 47 0 chr13 116286542 116286690 -3997622 + Lx6 LINE L1 6972 7126 -334 4 1472 789 67 0 0 chr13 116286971 116287075 -3997237 + (CA)n Simple_repeat Simple_repeat 2 105 0 4 1472 229 320 0 25 chr13 116287581 116287661 -3996651 + Lx9 LINE L1 7292 7369 -275 4 1472 40641 14 2 6 chr13 116288323 116294716 -3989596 - L1Md_A LINE L1 -12 6570 208 4 1472 1542 244 65 102 chr13 116294743 116295222 -3989090 + Lx6 LINE L1 6983 7443 -17 4 1472 2248 156 224 28 chr13 116295851 116296175 -3988137 - RMER6C LTR ERVK -2 688 332 4 1472 335 101 29 0 chr13 116296175 116296244 -3988068 + (TCTG)n Simple_repeat Simple_repeat 2 72 0 4 1472 2248 156 224 28 chr13 116296244 116296283 -3988029 - RMER6C LTR ERVK -359 331 270 4 1472 222 62 0 0 chr13 116296283 116296315 -3987997 + (AACTG)n Simple_repeat Simple_repeat 2 33 0 4 1472 2248 156 224 28 chr13 116296315 116296525 -3987787 - RMER6C LTR ERVK -421 269 2 4 1472 784 277 88 50 chr13 116296535 116296979 -3987333 - L1MA7 LINE L1 -178 6113 5653 4 1472 433 324 75 0 chr13 116296996 116297237 -3987075 + L1M2 LINE L1 4844 5102 -1041 4 1472 183 0 0 159 chr13 116297305 116297456 -3986856 + (CAGAG)n Simple_repeat Simple_repeat 5 131 0 4 1472 259 246 0 0 chr13 116297457 116297526 -3986786 + GA-rich Low_complexity Low_complexity 3 71 0 4 1472 506 194 29 19 chr13 116297536 116297641 -3986671 + B1_Mur1 SINE Alu 42 147 -2 4 1472 369 290 11 29 chr13 116297659 116297833 -3986479 + L1M2 LINE L1 5317 5487 -804 4 1472 183 42 0 0 chr13 116300621 116300645 -3983667 + (TTTTTA)n Simple_repeat Simple_repeat 5 28 0 4 1472 445 265 120 74 chr13 116301418 116301593 -3982719 + B3A SINE B2 1 183 -15 4 1472 630 238 60 18 chr13 116302092 116302259 -3982053 - Lx9 LINE L1 -325 7319 7146 4 1472 234 105 0 0 chr13 116302338 116302376 -3981936 + (CAAAA)n Simple_repeat Simple_repeat 4 41 0 4 1472 1711 233 146 29 chr13 116302445 116302891 -3981421 - Lx5 LINE L1 -5 7045 6548 4 1472 246 327 44 25 chr13 116303471 116303631 -3980681 + Charlie12 DNA MER1_type 39 201 -2672 4 1472 367 315 85 0 chr13 116303484 116303614 -3980698 - RMER30 DNA MER1_type -52 150 10 4 1472 933 306 39 18 chr13 116304988 116305446 -3978866 - L1MB3 LINE L1 -181 5997 5524 4 1472 1031 116 0 7 chr13 116305636 116305784 -3978528 + B1_Mus1 SINE Alu 2 148 0 4 1472 273 29 0 0 chr13 116305795 116305829 -3978483 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1472 647 334 87 28 chr13 116306023 116306535 -3977777 - Lx9 LINE L1 -49 7595 6899 4 1472 631 174 0 14 chr13 116306543 116306660 -3977652 + CT-rich Low_complexity Low_complexity 29 145 0 4 1472 1316 51 6 0 chr13 116306660 116306837 -3977475 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 4 1472 631 174 0 14 chr13 116306837 116306865 -3977447 + polypyrimidine Low_complexity Low_complexity 2 28 0 4 1472 524 106 12 0 chr13 116306868 116306953 -3977359 + (TTTA)n Simple_repeat Simple_repeat 1 86 0 4 1472 597 181 9 0 chr13 116306953 116307058 -3977254 - B1_Mus2 SINE Alu -1 146 41 4 1472 242 282 0 23 chr13 116307072 116307159 -3977153 - Lx9 LINE L1 -610 7034 6950 4 1472 571 249 104 16 chr13 116307165 116307412 -3976900 + Lx9 LINE L1 5701 5994 -1479 4 1472 236 350 42 8 chr13 116307615 116307733 -3976579 + Lx9 LINE L1 6357 6478 -1166 4 1472 21 0 0 0 chr13 116307950 116307971 -3976341 + AT_rich Low_complexity Low_complexity 1 21 0 4 1472 531 0 0 0 chr13 116309066 116309125 -3975187 + (CA)n Simple_repeat Simple_repeat 2 60 0 4 1472 23 54 0 0 chr13 116309183 116309220 -3975092 + AT_rich Low_complexity Low_complexity 1 37 0 4 1472 1721 316 39 8 chr13 116309784 116310372 -3973940 - Lx8 LINE L1 -339 7134 6529 4 1472 2260 218 46 11 chr13 116310373 116310938 -3973374 + Lx9 LINE L1 6929 7513 -131 4 1472 194 98 58 19 chr13 116310943 116310995 -3973317 + (TA)n Simple_repeat Simple_repeat 2 55 0 4 1472 355 183 55 55 chr13 116311013 116311140 -3973172 + Lx9 LINE L1 7463 7589 -55 4 1472 1229 273 49 68 chr13 116311412 116312193 -3972119 - L1_Mur3 LINE L1 -2979 2901 2136 4 1472 417 257 27 9 chr13 116312239 116312349 -3971963 + B3 SINE B2 37 148 -68 4 1472 495 0 0 0 chr13 116312349 116312404 -3971908 + (CA)n Simple_repeat Simple_repeat 2 56 0 4 1472 183 80 0 0 chr13 116313008 116313033 -3971279 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 4 1472 1150 334 114 33 chr13 116315007 116315698 -3968614 - Lx8 LINE L1 -28 7445 6699 4 1472 378 0 0 0 chr13 116316638 116316680 -3967632 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1472 23 0 0 0 chr13 116317056 116317079 -3967233 + AT_rich Low_complexity Low_complexity 1 23 0 4 1472 388 214 0 18 chr13 116317779 116317893 -3966419 + (TA)n Simple_repeat Simple_repeat 2 113 0 4 1472 4339 48 15 2 chr13 116317913 116318457 -3965855 + L1Md_F2 LINE L1 6028 6578 -4 4 1472 953 204 150 0 chr13 116318474 116318694 -3965618 - Lx6 LINE L1 -786 6674 6422 4 1472 1166 219 21 35 chr13 116320024 116320313 -3963999 - Lx7 LINE L1 -1342 6354 6070 4 1472 37 0 0 0 chr13 116320319 116320356 -3963956 + AT_rich Low_complexity Low_complexity 1 37 0 4 1472 23464 171 42 7 chr13 116320406 116326313 -3957999 - Lx3C LINE L1 -2 6974 866 4 1472 1119 95 0 0 chr13 116326956 116327103 -3957209 + B1_Mm SINE Alu 1 147 0 4 1472 231 88 0 0 chr13 116328506 116328540 -3955772 + (GA)n Simple_repeat Simple_repeat 2 35 0 4 1472 415 291 135 0 chr13 116328561 116328694 -3955618 - B4A SINE B4 -66 226 75 4 1472 1621 159 97 7 chr13 116328694 116328992 -3955320 + ORR1B1 LTR MaLR 1 325 -69 4 1472 230 288 61 0 chr13 116328995 116329061 -3955251 - B4A SINE B4 -216 76 7 4 1472 1826 162 22 0 chr13 116329168 116329488 -3954824 + ORR1A2 LTR MaLR 1 327 0 4 1472 593 325 29 0 chr13 116329677 116329886 -3954426 + MLT1D LTR MaLR 10 224 -281 4 1472 185 106 0 78 chr13 116329903 116329954 -3954358 + A-rich Low_complexity Low_complexity 2 48 0 4 1472 249 33 0 0 chr13 116330462 116330492 -3953820 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1472 501 274 10 0 chr13 116330571 116330673 -3953639 + RSINE1 SINE B4 44 146 -19 4 1472 207 0 0 0 chr13 116330687 116330710 -3953602 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 4 1472 193 154 0 55 chr13 116331685 116331740 -3952572 + T-rich Low_complexity Low_complexity 2 53 0 4 1472 415 0 91 26 chr13 116332246 116332323 -3951989 + (TTTTTG)n Simple_repeat Simple_repeat 3 84 0 4 1472 213 108 0 0 chr13 116332316 116332353 -3951959 + (TTGTG)n Simple_repeat Simple_repeat 4 40 0 4 1472 308 300 50 0 chr13 116333777 116333877 -3950435 - PB1D10 SINE Alu -12 105 1 4 1472 29 28 0 0 chr13 116334719 116334755 -3949557 + AT_rich Low_complexity Low_complexity 1 36 0 4 1472 593 283 11 53 chr13 116334759 116334949 -3949363 - B3A SINE B2 -8 190 9 4 1472 1492 183 189 14 chr13 116334949 116335304 -3949008 + L1_Mur3 LINE L1 5340 5756 -124 4 1472 4097 236 55 50 chr13 116335303 116336425 -3947887 + Lx6 LINE L1 6326 7453 -7 4 1472 689 188 0 7 chr13 116336522 116336677 -3947635 + CT-rich Low_complexity Low_complexity 3 156 0 4 1472 1310 93 21 0 chr13 116336766 116336960 -3947352 + L1_Mus2 LINE L1 6369 6566 0 4 1472 30 0 0 0 chr13 116337049 116337079 -3947233 + AT_rich Low_complexity Low_complexity 1 30 0 4 1472 489 47 0 0 chr13 116338223 116338287 -3946025 + (TG)n Simple_repeat Simple_repeat 1 64 0 4 1472 1455 248 129 24 chr13 116339274 116339700 -3944612 + RMER15 LTR ERVL 105 575 0 4 1472 558 77 0 0 chr13 116339719 116339797 -3944515 + Lx2 LINE L1 5907 5984 -1016 4 1472 1230 129 30 0 chr13 116339795 116339997 -3944315 + Lx5 LINE L1 5672 5879 -1171 4 1472 2526 128 92 0 chr13 116340016 116340438 -3943874 + Lx2 LINE L1 6537 6997 0 4 1472 444 19 0 0 chr13 116342012 116342065 -3942247 + (CA)n Simple_repeat Simple_repeat 1 53 0 4 1472 22 35 0 0 chr13 116342454 116342483 -3941829 + AT_rich Low_complexity Low_complexity 1 29 0 4 1472 3704 118 0 14 chr13 116342567 116343136 -3941176 + L1_Mus4 LINE L1 6066 6626 -10 4 1472 189 147 0 0 chr13 116343344 116343378 -3940934 + (A)n Simple_repeat Simple_repeat 1 34 0 4 1472 287 292 107 40 chr13 116343492 116343642 -3940670 + MLT1B LTR MaLR 230 389 -1 4 1472 208 143 0 0 chr13 116343725 116343760 -3940552 + (TAAAA)n Simple_repeat Simple_repeat 3 37 0 4 1472 6644 12 0 0 chr13 116344016 116344762 -3939550 + L1Md_T LINE L1 5837 6582 0 4 1472 226 275 166 27 chr13 116344820 116345115 -3939197 + L1MD LINE L1 4254 4589 -1557 4 1472 7248 129 9 14 chr13 116345144 116346911 -3937401 - Lx LINE L1 0 6654 4894 4 1472 1561 32 0 16 chr13 116347941 116348129 -3936183 + B2_Mm1t SINE B2 1 185 -8 4 1472 358 283 21 52 chr13 116348450 116348547 -3935765 - PB1D10 SINE Alu 0 117 24 4 1472 359 325 32 6 chr13 116349212 116349370 -3934942 - MTEa LTR MaLR 0 379 218 4 1472 308 269 0 0 chr13 116349399 116349466 -3934846 - MTEa LTR MaLR -303 67 1 4 1472 452 239 38 58 chr13 116349466 116349619 -3934693 - MTEa-int LTR MaLR -53 1527 1413 4 1472 306 111 67 0 chr13 116349625 116349670 -3934642 - Lx5 LINE L1 -560 6490 6443 4 1472 1836 216 3 0 chr13 116349681 116350005 -3934307 + Lx5 LINE L1 6513 6837 -213 5 1472 2259 55 0 10 chr13 116350047 116350342 -3933970 - L1Md_F2 LINE L1 -13 6569 6278 5 1472 23 0 0 0 chr13 116350346 116350369 -3933943 + AT_rich Low_complexity Low_complexity 1 23 0 5 1472 503 256 5 71 chr13 116350566 116350776 -3933536 + Lx7 LINE L1 7478 7673 -23 5 1472 31 26 0 0 chr13 116350776 116350814 -3933498 + AT_rich Low_complexity Low_complexity 1 38 0 5 1472 207 0 0 0 chr13 116352313 116352336 -3931976 + (T)n Simple_repeat Simple_repeat 1 23 0 5 1472 260 27 0 26 chr13 116352440 116352478 -3931834 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 5 1472 1214 276 17 45 chr13 116352485 116352841 -3931471 + Lx5 LINE L1 6697 7042 -8 5 1472 183 162 0 0 chr13 116352880 116352917 -3931395 + CT-rich Low_complexity Low_complexity 2 38 0 5 1472 2973 119 231 11 chr13 116353312 116353866 -3930446 + RLTR33 LTR ERVK 1 676 -2 5 1472 995 199 144 12 chr13 116354025 116354201 -3930111 + Lx9 LINE L1 7258 7458 -186 5 1472 711 65 0 0 chr13 116354201 116354294 -3930018 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 5 1472 995 199 144 12 chr13 116354294 116354312 -3930000 + Lx9 LINE L1 7459 7490 -154 5 1472 195 129 0 0 chr13 116354312 116354343 -3929969 + (CATA)n Simple_repeat Simple_repeat 2 32 0 5 1472 995 199 144 12 chr13 116354343 116354487 -3929825 + Lx9 LINE L1 7491 7641 -3 5 1472 21 0 0 0 chr13 116355114 116355135 -3929177 + AT_rich Low_complexity Low_complexity 1 21 0 5 1472 477 299 117 64 chr13 116355187 116355545 -3928767 - Lx7 LINE L1 -3 7470 7094 5 1472 968 301 99 32 chr13 116355548 116356030 -3928282 - Lx7 LINE L1 -846 6850 6332 5 1472 351 0 0 0 chr13 116356030 116356069 -3928243 + (TG)n Simple_repeat Simple_repeat 2 40 0 5 1472 465 291 50 45 chr13 116356069 116356107 -3928205 - Lx7 LINE L1 -1142 6331 6297 5 1472 300 70 0 0 chr13 116356112 116356155 -3928157 + (GA)n Simple_repeat Simple_repeat 2 44 0 5 1472 1313 52 12 0 chr13 116356156 116356329 -3927983 + (GAAA)n Simple_repeat Simple_repeat 4 178 0 5 1472 490 242 52 42 chr13 116356370 116356532 -3927780 + RMER20B LTR ERVK 1 161 -355 5 1472 248 304 119 96 chr13 116356624 116356842 -3927470 + RMER20B LTR ERVK 294 516 0 5 1472 939 270 60 72 chr13 116356886 116357221 -3927091 + MTD LTR MaLR 1 331 -88 5 1472 24477 137 11 13 chr13 116357221 116358433 -3925879 - L1_Mus4 LINE L1 -705 5931 4732 5 1472 270 21 42 21 chr13 116358433 116358481 -3925831 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 5 1472 24477 155 15 18 chr13 116358481 116362673 -3921639 - L1_Mus4 LINE L1 -1152 4731 546 5 1472 438 20 0 0 chr13 116363169 116363220 -3921092 + (TA)n Simple_repeat Simple_repeat 2 52 0 5 1472 297 354 0 0 chr13 116363228 116363307 -3921005 - RSINE1 SINE B4 -10 155 77 5 1472 414 0 0 0 chr13 116363355 116363401 -3920911 + (TG)n Simple_repeat Simple_repeat 1 46 0 5 1472 264 277 66 42 chr13 116363411 116363577 -3920735 - L1M2 LINE L1 -709 5588 5419 5 1472 29 0 0 0 chr13 116363721 116363750 -3920562 + AT_rich Low_complexity Low_complexity 1 29 0 5 1472 296 354 22 59 chr13 116363989 116364124 -3920188 + RSINE1 SINE B4 36 165 0 5 1472 677 240 108 63 chr13 116364160 116364511 -3919801 + L1M2 LINE L1 4454 4820 -1323 5 1472 529 178 116 0 chr13 116366384 116366513 -3917799 + Lx4A LINE L1 6915 7058 0 5 1472 415 288 64 25 chr13 116366515 116366672 -3917640 - B4A SINE B4 -46 246 84 5 1472 360 111 0 0 chr13 116366812 116366866 -3917446 + (TG)n Simple_repeat Simple_repeat 2 55 0 5 1472 1255 313 185 14 chr13 116366909 116367635 -3916677 - Lx9 LINE L1 -312 7332 6337 5 1472 207 69 0 0 chr13 116367644 116367673 -3916639 + (CA)n Simple_repeat Simple_repeat 1 29 0 5 1472 228 250 0 0 chr13 116367673 116367721 -3916591 + Lx9 LINE L1 6436 6483 -1161 5 1472 305 350 0 10 chr13 116367724 116367822 -3916490 - B4A SINE B4 -194 98 2 5 1472 1159 55 7 0 chr13 116367851 116367996 -3916316 + B1_Mus2 SINE Alu 2 147 0 5 1472 916 84 107 0 chr13 116369057 116369188 -3915124 - B1_Mus2 SINE Alu 0 147 3 5 1472 1765 206 45 29 chr13 116370588 116370912 -3913400 + ORR1B1 LTR MaLR 1 329 -65 5 1472 198 71 0 0 chr13 116370912 116370940 -3913372 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 5 1472 1765 206 45 29 chr13 116370940 116370995 -3913317 + ORR1B1 LTR MaLR 330 386 -8 5 1472 1181 46 0 0 chr13 116371344 116371495 -3912817 - L1Md_A LINE L1 0 6582 6432 5 1472 1151 199 13 26 chr13 116371882 116372109 -3912203 - URR1B DNA MER1_type -1 224 1 5 1472 25 0 0 0 chr13 116372990 116373015 -3911297 + AT_rich Low_complexity Low_complexity 1 25 0 5 1472 22 0 0 0 chr13 116373158 116373180 -3911132 + AT_rich Low_complexity Low_complexity 1 22 0 5 1472 4892 118 14 5 chr13 116374432 116375192 -3909120 - L1_Mus4 LINE L1 -1 6635 5869 5 1472 299 183 0 27 chr13 116375192 116375265 -3909047 + (CATA)n Simple_repeat Simple_repeat 2 72 0 5 1472 38085 44 0 3 chr13 116375399 116381802 -3902510 - L1Md_T LINE L1 0 6585 103 5 1472 715 213 7 0 chr13 116382130 116382271 -3902041 - B1_Mus1 SINE Alu -6 142 1 5 1472 285 316 93 7 chr13 116382155 116382295 -3902017 - B4 SINE B4 -85 207 56 5 1472 6615 112 22 5 chr13 116382555 116383536 -3900776 - Lx LINE L1 -18 6636 5639 5 1472 192 40 0 0 chr13 116383770 116383795 -3900517 + (TA)n Simple_repeat Simple_repeat 1 25 0 5 1472 27 100 0 0 chr13 116383810 116383900 -3900412 + AT_rich Low_complexity Low_complexity 1 90 0 5 1472 237 65 0 0 chr13 116387546 116387577 -3896735 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5 22 34246 93 23 11 chr13 116387579 116393858 -3890454 - L1Md_F2 LINE L1 -19 6563 208 5 1473 4256 124 20 52 chr13 116394449 116395384 -3888928 - Lx3_Mus LINE L1 -629 6380 5491 5 1473 302 0 26 0 chr13 116396031 116396069 -3888243 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 5 1473 516 322 33 33 chr13 116396097 116396312 -3888000 + B3 SINE B2 2 216 0 5 1473 2532 82 56 0 chr13 116396572 116396912 -3887400 - RLTR10D LTR ERVK 0 359 1 5 1473 881 192 150 0 chr13 116397319 116397506 -3886806 + B3 SINE B2 1 215 -1 5 1473 415 309 181 32 chr13 116397710 116398268 -3886044 - L1MC2 LINE L1 -370 5974 5334 5 1473 348 301 88 71 chr13 116398280 116398520 -3885792 + L1MC2 LINE L1 5098 5341 -805 5 1473 4238 84 2 2 chr13 116398537 116399109 -3885203 - L1_Mus1 LINE L1 -1 6566 5995 5 1473 936 69 0 0 chr13 116399118 116399248 -3885064 + L1_Mus1 LINE L1 5851 5980 -586 5 1473 288 293 18 45 chr13 116399525 116399649 -3884663 + PB1D10 SINE Alu 1 128 -21 5 1473 301 276 35 77 chr13 116399665 116399834 -3884478 + Lx7 LINE L1 5632 5793 -1903 5 1473 241 250 32 21 chr13 116399908 116400002 -3884310 - L1M3 LINE L1 -1633 4507 4413 5 1473 274 123 0 44 chr13 116400108 116400176 -3884136 + A-rich Low_complexity Low_complexity 1 65 0 5 1473 2210 81 0 13 chr13 116402079 116402392 -3881920 - L1Md_F2 LINE L1 -10 6572 6264 5 1473 1193 22 0 0 chr13 116402392 116402527 -3881785 + L1Md_F2 LINE L1 6140 6274 -308 5 1473 355 323 72 1 chr13 116402719 116402877 -3881435 + MLT1A0 LTR MaLR 118 286 -88 5 1473 227 382 54 27 chr13 116405308 116405456 -3878856 + Zaphod DNA Tip100 302 453 -3578 5 1473 8432 142 58 9 chr13 116405549 116406804 -3877508 + L1_Mus3 LINE L1 4302 5573 -310 5 1473 1037 90 14 0 chr13 116406804 116406949 -3877363 + B1_Mus1 SINE Alu 2 148 0 5 1473 8432 142 58 9 chr13 116406949 116406997 -3877315 + L1_Mus3 LINE L1 5574 5680 -203 5 1473 906 10 0 0 chr13 116406997 116407100 -3877212 + (GGAAA)n Simple_repeat Simple_repeat 3 105 0 5 1473 8432 93 9 0 chr13 116407100 116408049 -3876263 + L1_Mus3 LINE L1 5681 6638 0 5 1473 291 175 0 0 chr13 116408852 116408909 -3875403 + CT-rich Low_complexity Low_complexity 2 58 0 5 1473 23 0 0 0 chr13 116409821 116409844 -3874468 + AT_rich Low_complexity Low_complexity 1 23 0 5 1473 1294 178 91 0 chr13 116410085 116410327 -3873985 + MTC LTR MaLR 9 272 -149 5 1473 3519 84 4 4 chr13 116410343 116410830 -3873482 - RLTR1C LTR ERV1 -16 487 1 5 1473 705 196 69 14 chr13 116410830 116410975 -3873337 + MTC LTR MaLR 269 421 0 5 1473 593 347 55 0 chr13 116411125 116411505 -3872807 + L1_Mur3 LINE L1 5163 5563 -317 5 1473 300 235 20 10 chr13 116411641 116411740 -3872572 - L1_Mur3 LINE L1 -6708 1004 905 5 1473 243 0 0 0 chr13 116412293 116412320 -3871992 + (CA)n Simple_repeat Simple_repeat 2 28 0 5 1473 751 236 88 56 chr13 116412321 116412490 -3871822 + Lx9 LINE L1 6850 7022 -622 5 1473 1159 91 11 0 chr13 116412490 116412665 -3871647 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 5 1473 751 236 88 56 chr13 116412665 116412746 -3871566 + Lx9 LINE L1 7023 7108 -536 5 1473 42 36 0 0 chr13 116413322 116413378 -3870934 + AT_rich Low_complexity Low_complexity 1 56 0 5 1473 241 295 77 0 chr13 116413378 116413456 -3870856 - MER34 LTR ERV1 -104 438 355 5 1473 264 30 0 0 chr13 116413636 116413669 -3870643 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1473 732 217 0 0 chr13 116415409 116415547 -3868765 - MTC LTR MaLR -279 142 5 5 1473 335 302 0 0 chr13 116415894 116415980 -3868332 - B4A SINE B4 -204 88 3 5 1473 222 37 0 0 chr13 116416134 116416161 -3868151 + (CA)n Simple_repeat Simple_repeat 1 27 0 5 1473 3059 197 46 8 chr13 116416220 116416824 -3867488 - RMER20B LTR ERVK 0 627 1 5 1473 950 338 87 60 chr13 116416833 116417431 -3866881 - Lx9 LINE L1 -266 7378 6765 5 1473 1077 136 0 0 chr13 116418412 116418589 -3865723 + (GGGAGA)n Simple_repeat Simple_repeat 4 180 0 5 1473 957 126 17 0 chr13 116418610 116418785 -3865527 + (GGA)n Simple_repeat Simple_repeat 1 178 0 5 1473 189 0 0 0 chr13 116418837 116418858 -3865454 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 5 1473 285 300 97 28 chr13 116423049 116423337 -3860975 + L1M5 LINE L1 3808 4115 -2031 5 1473 702 0 0 0 chr13 116423605 116423683 -3860629 + (TC)n Simple_repeat Simple_repeat 1 78 0 5 1473 4262 31 2 2 chr13 116424028 116424540 -3859772 - L1Md_F3 LINE L1 0 6584 6073 5 1473 934 57 24 36 chr13 116424682 116424938 -3859374 + (TG)n Simple_repeat Simple_repeat 1 252 0 5 1473 6417 125 28 17 chr13 116425011 116425789 -3858523 - Lx LINE L1 0 6654 5873 5 1473 387 0 0 0 chr13 116425789 116425832 -3858480 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1473 7770 158 33 65 chr13 116425832 116426262 -3858050 - Lx LINE L1 -782 5872 5459 5 1473 398 186 0 49 chr13 116426262 116426364 -3857948 - L1Md_F2 LINE L1 0 6582 6486 5 1473 7770 216 41 151 chr13 116426364 116428025 -3856287 - Lx LINE L1 -428 5458 3933 5 1473 297 68 45 0 chr13 116428025 116428069 -3856243 + B1_Mus2 SINE Alu 36 81 -66 5 1473 7770 216 41 151 chr13 116428069 116428499 -3855813 - Lx LINE L1 -428 3932 3536 5 1473 478 104 6 8 chr13 116428499 116428581 -3855731 + B1_Mm SINE Alu 31 138 -9 5 1473 257 0 0 29 chr13 116428582 116428616 -3855696 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5 1473 7770 216 41 151 chr13 116428616 116429131 -3855181 - Lx LINE L1 -2352 3534 3051 5 1473 343 66 16 16 chr13 116429110 116429172 -3855140 - MusHAL1 LINE L1 -1895 817 756 6 1473 2017 158 90 23 chr13 116429159 116429548 -3854764 - L1VL2 LINE L1 -5708 627 213 6 1473 266 330 99 63 chr13 116429928 116430119 -3854193 + MLT1A LTR MaLR 177 374 0 6 1473 1281 22 0 37 chr13 116430509 116430696 -3853616 + (GA)n Simple_repeat Simple_repeat 1 180 0 6 1473 261 0 0 0 chr13 116431237 116431266 -3853046 + (CA)n Simple_repeat Simple_repeat 2 30 0 6 1473 24 0 0 0 chr13 116431488 116431512 -3852800 + AT_rich Low_complexity Low_complexity 1 24 0 6 1473 796 181 12 0 chr13 116432013 116432184 -3852128 + CT-rich Low_complexity Low_complexity 4 176 0 6 1473 352 181 24 0 chr13 116432976 116433059 -3851253 + (TA)n Simple_repeat Simple_repeat 1 85 0 6 1473 317 288 0 0 chr13 116433133 116433213 -3851099 - Lx9 LINE L1 -640 7004 6925 6 1473 624 91 0 0 chr13 116433236 116433324 -3850988 + (TC)n Simple_repeat Simple_repeat 2 89 0 6 1473 1448 309 37 19 chr13 116433460 116433972 -3850340 - Lx9 LINE L1 -734 6910 6390 6 1473 267 288 0 40 chr13 116433972 116434048 -3850264 + (TG)n Simple_repeat Simple_repeat 2 74 0 6 1473 945 319 89 45 chr13 116434098 116434716 -3849596 + Lx9 LINE L1 6963 7607 -37 6 1473 204 83 0 53 chr13 116434977 116435015 -3849297 + (CAAAAA)n Simple_repeat Simple_repeat 6 41 0 6 1473 27 0 0 0 chr13 116435504 116435531 -3848781 + AT_rich Low_complexity Low_complexity 1 27 0 6 1473 2308 148 16 8 chr13 116435562 116435943 -3848369 + ORR1B1 LTR MaLR 3 386 -8 6 1473 26 30 0 0 chr13 116436013 116436046 -3848266 + AT_rich Low_complexity Low_complexity 1 33 0 6 1473 334 305 76 53 chr13 116436719 116436982 -3847330 - L1MC LINE L1 -1387 4759 4491 6 1473 2771 110 0 10 chr13 116437330 116437742 -3846570 - L1_Mus3 LINE L1 -139 6499 6092 6 1473 1732 239 29 67 chr13 116437791 116438447 -3845865 - L1_Rod LINE L1 -2206 3641 3011 6 1473 25 0 0 0 chr13 116438649 116438674 -3845638 + AT_rich Low_complexity Low_complexity 1 25 0 6 1473 3615 211 110 47 chr13 116438726 116439729 -3844583 - Lx7 LINE L1 -1755 5941 4379 6 1473 252 0 0 0 chr13 116439729 116439757 -3844555 + (TTTTA)n Simple_repeat Simple_repeat 5 32 0 6 1473 3615 211 194 66 chr13 116439757 116440572 -3843740 - Lx7 LINE L1 -1502 4378 3601 6 1473 435 83 0 0 chr13 116440664 116440724 -3843588 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1473 1091 101 0 7 chr13 116441002 116441151 -3843161 + B1_Mus1 SINE Alu 1 148 0 6 1473 275 0 0 28 chr13 116441174 116441210 -3843102 + (TAA)n Simple_repeat Simple_repeat 3 37 0 6 1473 32 26 0 0 chr13 116442060 116442099 -3842213 + AT_rich Low_complexity Low_complexity 1 39 0 6 1473 382 299 31 10 chr13 116444481 116444579 -3839733 + B3A SINE B2 4 103 -95 6 1473 232 351 70 9 chr13 116444608 116444723 -3839589 + B3 SINE B2 87 208 -8 6 1473 313 115 58 0 chr13 116444733 116444820 -3839492 + (CATA)n Simple_repeat Simple_repeat 4 95 0 6 1473 209 30 61 0 chr13 116445019 116445052 -3839260 + (CAAAAA)n Simple_repeat Simple_repeat 1 35 0 6 1473 2316 232 45 59 chr13 116446651 116447071 -3837241 + Lx7 LINE L1 6959 7381 -315 6 1473 483 48 0 0 chr13 116447071 116447133 -3837179 + (TCTA)n Simple_repeat Simple_repeat 1 62 0 6 1473 2316 231 46 60 chr13 116447133 116447446 -3836866 + Lx7 LINE L1 7382 7692 -4 6 1473 387 0 0 0 chr13 116449929 116449972 -3834340 + (TG)n Simple_repeat Simple_repeat 2 44 0 6 1473 264 243 135 84 chr13 116450551 116450869 -3833443 - L1M2 LINE L1 -491 5809 5471 6 1473 654 49 0 0 chr13 116451787 116451869 -3832443 + (TG)n Simple_repeat Simple_repeat 1 82 0 6 1473 396 278 0 11 chr13 116452145 116452236 -3832076 - B4A SINE B4 -14 278 189 6 1473 383 0 0 21 chr13 116452935 116452983 -3831329 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1473 723 307 3 13 chr13 116453376 116453683 -3830629 - L1_Mur3 LINE L1 -3316 2564 2261 6 1473 424 213 40 23 chr13 116454577 116454750 -3829562 - Lx9 LINE L1 0 7644 7469 6 1473 574 190 25 25 chr13 116454822 116454941 -3829371 - Lx9 LINE L1 -165 7479 7361 6 1473 365 222 0 0 chr13 116454945 116455017 -3829295 + Lx9 LINE L1 7171 7242 -402 6 1473 1257 100 33 95 chr13 116455018 116455260 -3829052 + L1_Mus3 LINE L1 6407 6633 -5 6 1473 1014 113 0 13 chr13 116455260 116455413 -3828899 + Lx3B LINE L1 5833 5983 -990 6 1473 26 93 0 0 chr13 116455430 116455505 -3828807 + AT_rich Low_complexity Low_complexity 1 75 0 6 1473 2065 276 76 45 chr13 116455598 116456507 -3827805 - Lx9 LINE L1 -145 7499 6563 6 1473 2601 58 63 14 chr13 116456832 116457198 -3827114 + L1Md_F2 LINE L1 6187 6570 -12 6 1473 333 338 62 62 chr13 116457198 116457454 -3826858 - LTR16B1 LTR ERVL -159 321 66 6 1473 189 0 0 0 chr13 116457476 116457497 -3826815 + (TA)n Simple_repeat Simple_repeat 2 22 0 6 1473 1515 12 0 0 chr13 116457765 116457938 -3826374 + (TCTCCC)n Simple_repeat Simple_repeat 2 174 0 6 1473 439 112 67 0 chr13 116457938 116458027 -3826285 + CT-rich Low_complexity Low_complexity 6 100 0 6 1473 24 0 0 0 chr13 116458579 116458603 -3825709 + AT_rich Low_complexity Low_complexity 1 24 0 6 1473 24 67 0 0 chr13 116460235 116460280 -3824032 + AT_rich Low_complexity Low_complexity 1 45 0 6 1473 411 21 0 0 chr13 116462279 116462327 -3821985 + (CA)n Simple_repeat Simple_repeat 2 49 0 6 1473 285 53 17 35 chr13 116462334 116462392 -3821920 + (CAA)n Simple_repeat Simple_repeat 2 58 0 6 1473 295 265 193 34 chr13 116462500 116462769 -3821543 + L1MA6 LINE L1 5601 5912 -388 6 1473 22 0 0 0 chr13 116463293 116463315 -3820997 + AT_rich Low_complexity Low_complexity 1 22 0 6 1473 294 29 0 0 chr13 116467505 116467540 -3816772 + (TG)n Simple_repeat Simple_repeat 2 36 0 6 1473 751 161 14 9 chr13 116467920 116468144 -3816168 + GA-rich Low_complexity Low_complexity 1 225 0 6 1473 35 41 0 0 chr13 116468171 116468220 -3816092 + AT_rich Low_complexity Low_complexity 1 49 0 6 1473 543 285 48 39 chr13 116468932 116469140 -3815172 - B3 SINE B2 -1 215 6 6 1473 236 361 20 49 chr13 116470887 116470989 -3813323 - B1F SINE Alu 0 149 51 6 1473 645 259 42 81 chr13 116471073 116471380 -3812932 - L1MA6 LINE L1 -289 6011 5717 6 1473 242 314 107 46 chr13 116471403 116471600 -3812712 + MLT1I LTR MaLR 4 212 -199 6 1473 540 0 0 0 chr13 116472290 116472350 -3811962 + (GA)n Simple_repeat Simple_repeat 1 60 0 6 1473 21 0 0 0 chr13 116473198 116473219 -3811093 + AT_rich Low_complexity Low_complexity 1 21 0 6 1473 661 287 106 31 chr13 116473280 116473762 -3810550 - Lx9 LINE L1 0 7644 7127 6 1473 1244 289 51 5 chr13 116473776 116474169 -3810143 + Lx9 LINE L1 6591 7001 -643 6 1473 297 299 0 0 chr13 116474170 116474237 -3810075 + polypurine Low_complexity Low_complexity 3 69 0 6 1473 24 0 0 0 chr13 116474434 116474458 -3809854 + AT_rich Low_complexity Low_complexity 1 24 0 6 1473 21 36 0 0 chr13 116474552 116474580 -3809732 + AT_rich Low_complexity Low_complexity 1 28 0 6 1473 2094 77 8 0 chr13 116475999 116476306 -3808006 + L1_Mus4 LINE L1 6195 6472 -164 6 1473 378 43 0 68 chr13 116476306 116476380 -3807932 + L1_Mus4 LINE L1 6570 6638 0 6 1473 201 147 0 0 chr13 116476863 116476897 -3807415 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 6 1473 414 0 0 0 chr13 116477406 116477452 -3806860 + (CA)n Simple_repeat Simple_repeat 1 46 0 6 1473 948 94 0 0 chr13 116478255 116478414 -3805898 + (TC)n Simple_repeat Simple_repeat 2 160 0 6 1473 224 130 22 0 chr13 116478860 116478906 -3805406 + G-rich Low_complexity Low_complexity 1 47 0 6 1473 8392 46 3 0 chr13 116479239 116480963 -3803349 - L1Md_F2 LINE L1 -12 6570 4843 6 1473 223 58 54 71 chr13 116481684 116481740 -3802572 + T-rich Low_complexity Low_complexity 1 55 0 6 1473 237 163 0 0 chr13 116482771 116482820 -3801492 - L1MB7 LINE L1 -19 6165 6117 6 1473 396 0 0 0 chr13 116483048 116483092 -3801220 + (CATA)n Simple_repeat Simple_repeat 4 47 0 6 1473 1051 115 11 6 chr13 116484421 116484596 -3799716 + L1_Mus3 LINE L1 6460 6635 -3 6 1473 695 78 0 0 chr13 116484661 116484751 -3799561 - L1_Mus4 LINE L1 -875 5761 5672 6 1473 5233 116 58 2 chr13 116484751 116485571 -3798741 + L1_Mus4 LINE L1 5765 6630 -6 6 1473 317 257 41 12 chr13 116487126 116487295 -3797017 + (TAGA)n Simple_repeat Simple_repeat 4 177 0 6 1473 852 126 0 0 chr13 116487486 116487613 -3796699 - B1_Mus2 SINE Alu 0 147 21 6 1473 868 302 16 8 chr13 116488195 116488534 -3795778 + Lx7 LINE L1 5634 5976 -1668 6 1473 662 292 53 37 chr13 116488687 116488932 -3795380 - MTD-int LTR MaLR -1117 253 5 6 1473 641 289 102 31 chr13 116488939 116489164 -3795148 - MTD LTR MaLR -14 405 165 6 1473 342 0 0 0 chr13 116489319 116489357 -3794955 + (CTA)n Simple_repeat Simple_repeat 3 40 0 6 1473 194 0 39 0 chr13 116489551 116489577 -3794735 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1473 387 179 237 8 chr13 116489622 116489740 -3794572 - Lx6 LINE L1 -5 7455 7311 6 1473 259 298 45 23 chr13 116489832 116490052 -3794260 - L1MCa LINE L1 -5281 1227 1003 6 1473 815 271 36 20 chr13 116490072 116490321 -3793991 - Lx6 LINE L1 -136 7324 7072 6 1473 671 211 242 6 chr13 116490969 116491130 -3793182 + B3 SINE B2 1 199 -17 6 1473 180 111 0 0 chr13 116492079 116492106 -3792206 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1473 3323 62 5 0 chr13 116492142 116492574 -3791738 - L1Md_F3 LINE L1 -1 6583 6150 6 1473 530 180 7 92 chr13 116492583 116492724 -3791588 - RMER1C Other Other -13 1329 1201 6 1473 188 163 23 0 chr13 116492724 116492767 -3791545 + GA-rich Low_complexity Low_complexity 1 44 0 6 1473 619 229 105 11 chr13 116492767 116492948 -3791364 - RMER1C Other Other -118 1224 1027 6 1473 27597 85 7 11 chr13 116492954 116497525 -3786787 - L1Md_F LINE L1 -954 4929 391 6 1473 425 65 0 0 chr13 116497530 116497592 -3786720 - L1Md_F3 LINE L1 -11 6573 6512 6 1473 996 70 0 0 chr13 116497592 116497721 -3786591 + L1Md_F3 LINE L1 6347 6475 -109 6 1473 340 123 18 0 chr13 116497758 116497815 -3786497 - RMER19B LTR ERVK 0 902 845 6 1473 373 364 22 20 chr13 116497874 116498037 -3786275 + B3A SINE B2 38 203 -13 6 1473 479 17 17 0 chr13 116498252 116498312 -3786000 + (TA)n Simple_repeat Simple_repeat 1 61 0 6 1473 584 27 0 13 chr13 116498681 116498756 -3785556 + (TTTTC)n Simple_repeat Simple_repeat 2 75 0 6 1473 324 158 0 0 chr13 116498757 116498814 -3785498 + C-rich Low_complexity Low_complexity 3 59 0 6 1473 2598 112 18 0 chr13 116498838 116499232 -3785080 - Lx LINE L1 -7 6647 6247 6 1473 304 349 75 7 chr13 116500398 116500545 -3783767 + MLT2B1 LTR ERVL 73 229 -291 1 1473 215 146 20 40 chr13 116501116 116501166 -3783146 + (TTATA)n Simple_repeat Simple_repeat 4 52 0 2 1473 183 360 20 20 chr13 116501406 116501508 -3782804 + MIRb SINE MIR 96 197 -71 3 1473 339 266 96 80 chr13 116502114 116502378 -3781934 + MLT1E1 LTR MaLR 389 601 -53 4 1473 963 62 23 0 chr13 116502648 116502776 -3781536 - B1_Mus1 SINE Alu 0 148 18 5 1473 374 266 20 69 chr13 116502692 116502793 -3781519 - MT2B LTR ERVL -344 257 162 6 1473 519 60 0 0 chr13 116503643 116503710 -3780602 + (CA)n Simple_repeat Simple_repeat 2 68 0 7 1473 1045 308 47 40 chr13 116503717 116504248 -3780064 - Lx7 LINE L1 -358 7338 6804 8 1473 1267 221 58 29 chr13 116504363 116504745 -3779567 + Lx9 LINE L1 7250 7642 -2 9 1473 779 312 55 43 chr13 116505563 116505982 -3778330 - Tigger12 DNA MER2_type -1257 702 279 1 1473 429 365 47 71 chr13 116506214 116506553 -3777759 - MER119 DNA MER1_type -100 483 153 1 1473 665 291 124 41 chr13 116506832 116507147 -3777165 + MTEa LTR MaLR 37 377 -2 1 1473 488 226 27 62 chr13 116508365 116508511 -3775801 - RMER1C Other Other -1 1341 1201 1 1473 500 188 7 21 chr13 116508512 116508617 -3775695 + GA-rich Low_complexity Low_complexity 1 104 0 1 1473 1338 73 0 0 chr13 116508617 116508796 -3775516 + (GGGAGA)n Simple_repeat Simple_repeat 2 180 0 1 1473 500 188 7 21 chr13 116508796 116508831 -3775481 + polypurine Low_complexity Low_complexity 105 139 0 1 1473 2060 176 0 43 chr13 116508831 116509229 -3775083 - RMER1C Other Other -117 1225 845 1 1473 961 250 64 0 chr13 116509689 116509925 -3774387 - RMER1B Other Other -228 838 588 1 1473 22 35 0 0 chr13 116510016 116510045 -3774267 + AT_rich Low_complexity Low_complexity 1 29 0 1 1473 180 176 0 0 chr13 116510415 116510449 -3773863 + (CATATA)n Simple_repeat Simple_repeat 4 37 0 1 1473 503 303 36 18 chr13 116510458 116510734 -3773578 + L1MA6 LINE L1 5917 6197 -103 1 1473 22 0 0 0 chr13 116510815 116510837 -3773475 + AT_rich Low_complexity Low_complexity 1 22 0 2 1473 330 121 0 0 chr13 116510945 116511011 -3773301 + (A)n Simple_repeat Simple_repeat 1 66 0 2 1473 4822 173 63 21 chr13 116511331 116512311 -3772001 + RLTR25B LTR ERVK 8 1028 0 2 1473 390 256 36 62 chr13 116513573 116513765 -3770547 - Lx9 LINE L1 0 7644 7458 2 1473 270 217 50 0 chr13 116513767 116513887 -3770425 + (TA)n Simple_repeat Simple_repeat 1 126 0 2 1473 532 228 17 64 chr13 116513887 116514060 -3770252 - Lx9 LINE L1 -121 7523 7359 2 1473 224 340 10 10 chr13 116514628 116514730 -3769582 + (TATATG)n Simple_repeat Simple_repeat 1 102 0 2 1473 31 0 0 0 chr13 116517034 116517065 -3767247 + AT_rich Low_complexity Low_complexity 1 31 0 2 1473 375 127 0 0 chr13 116517680 116517743 -3766569 + (CATA)n Simple_repeat Simple_repeat 4 66 0 2 1473 206 158 26 0 chr13 116520671 116520709 -3763603 + CT-rich Low_complexity Low_complexity 1 39 0 2 1473 1306 162 116 7 chr13 116520709 116520994 -3763318 - Lx LINE L1 -4 6650 6335 3 1473 267 203 0 0 chr13 116521315 116521374 -3762938 + CT-rich Low_complexity Low_complexity 4 62 0 3 1473 489 112 86 23 chr13 116521731 116521859 -3762453 - Lx3_Mus LINE L1 -1 7008 6873 3 1473 729 214 141 78 chr13 116521974 116522295 -3762017 + ORR1A4 LTR MaLR 20 329 0 3 1473 355 297 32 25 chr13 116522296 116522473 -3761839 - Lx7 LINE L1 -1130 5928 5748 3 1473 225 127 54 18 chr13 116522473 116522529 -3761783 + (TA)n Simple_repeat Simple_repeat 1 58 0 3 184 497 313 149 36 chr13 116522529 116523241 -3761071 - Lx7 LINE L1 -135 5745 4954 3 1474 854 135 25 7 chr13 116523452 116523735 -3760577 + (CATA)n Simple_repeat Simple_repeat 1 288 0 3 1474 1254 310 58 50 chr13 116523768 116524271 -3760041 - Lx8 LINE L1 -146 7327 6821 3 1474 186 191 0 0 chr13 116524309 116524351 -3759961 + CT-rich Low_complexity Low_complexity 3 44 0 3 1474 360 0 0 0 chr13 116524437 116524477 -3759835 + (CA)n Simple_repeat Simple_repeat 1 40 0 3 1474 362 307 23 45 chr13 116524846 116524979 -3759333 - RSINE1 SINE B4 -34 131 2 4 1474 286 285 101 41 chr13 116525040 116525307 -3759005 - L1M4c LINE L1 -4551 2095 1813 4 1474 739 161 20 34 chr13 116525954 116526102 -3758210 - Lx3B LINE L1 -5 6968 6823 4 1474 1233 106 11 0 chr13 116526102 116526282 -3758030 + Lx3B LINE L1 6525 6706 -267 4 1474 327 385 0 0 chr13 116526282 116526386 -3757926 + B3A SINE B2 57 160 -38 4 1474 445 258 117 0 chr13 116526877 116527005 -3757307 - B3 SINE B2 -5 211 69 4 1474 246 81 0 0 chr13 116527148 116527185 -3757127 + (TG)n Simple_repeat Simple_repeat 2 38 0 4 1474 525 255 0 18 chr13 116527191 116527303 -3757009 - B1_Mus1 SINE Alu -38 110 1 4 1474 261 304 123 12 chr13 116528188 116528351 -3755961 - L1M4c LINE L1 -6316 226 46 4 1474 22 35 0 0 chr13 116528403 116528432 -3755880 + AT_rich Low_complexity Low_complexity 1 29 0 4 1474 3697 59 0 12 chr13 116528432 116528912 -3755400 - L1Md_F2 LINE L1 -19 6563 6090 4 1474 783 32 0 0 chr13 116528914 116529008 -3755304 + L1Md_F2 LINE L1 5948 6041 -541 4 1474 1189 261 47 70 chr13 116529231 116529588 -3754724 + ORR1D1 LTR MaLR 1 348 -26 5 1474 3828 54 9 38 chr13 116529588 116530122 -3754190 - MURVY-LTR LTR ERV1 0 519 1 5 1474 1189 261 47 70 chr13 116530122 116530147 -3754165 + ORR1D1 LTR MaLR 349 374 0 5 1474 494 350 0 6 chr13 116530639 116530803 -3753509 + RSINE1 SINE B4 3 165 0 5 1474 339 316 83 116 chr13 116532198 116532406 -3751906 - ORR1E LTR MaLR -13 346 148 5 1474 1038 60 0 0 chr13 116532406 116532540 -3751772 + (CCCTAA)n Simple_repeat Simple_repeat 3 136 0 5 1474 339 316 83 116 chr13 116532540 116532607 -3751705 - ORR1E LTR MaLR -212 147 80 5 1474 25 0 0 0 chr13 116533610 116533635 -3750677 + AT_rich Low_complexity Low_complexity 1 25 0 5 1474 249 197 0 0 chr13 116533781 116533847 -3750465 + A-rich Low_complexity Low_complexity 1 66 0 5 1474 663 325 5 42 chr13 116534476 116534691 -3749621 + MER44B DNA MER2_type 54 260 -290 5 1474 7404 73 39 20 chr13 116534917 116535995 -3748317 - Lx3_Mus LINE L1 0 7009 5912 5 1474 1374 146 23 23 chr13 116536509 116536768 -3747544 + Lx3C LINE L1 6711 6969 -7 5 1474 757 147 108 0 chr13 116536773 116536902 -3747410 + B1_Mus1 SINE Alu 1 143 -5 6 1474 369 0 0 0 chr13 116536905 116536946 -3747366 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 6 1474 441 0 0 0 chr13 116536946 116536995 -3747317 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1474 864 114 0 0 chr13 116537163 116537295 -3747017 - L1_Mus2 LINE L1 0 6566 6435 6 1474 207 0 0 0 chr13 116537389 116537412 -3746900 + (TTTTTG)n Simple_repeat Simple_repeat 5 27 0 6 1474 23 0 0 0 chr13 116538639 116538662 -3745650 + AT_rich Low_complexity Low_complexity 1 23 0 6 1474 656 289 7 1 chr13 116539827 116540024 -3744288 - MER58A DNA MER1_type -19 205 4 6 1474 23 0 0 0 chr13 116540306 116540329 -3743983 + AT_rich Low_complexity Low_complexity 1 23 0 6 1474 633 238 71 90 chr13 116540462 116540499 -3743813 + B3 SINE B2 8 52 -164 6 1474 1219 48 0 0 chr13 116540499 116540645 -3743667 + B1_Mus2 SINE Alu 2 147 0 6 1474 207 0 0 0 chr13 116540647 116540670 -3743642 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 7 1474 633 238 71 90 chr13 116540670 116540688 -3743624 + B3 SINE B2 53 68 -148 6 1474 760 41 0 83 chr13 116540688 116540820 -3743492 - L1Md_F2 LINE L1 -4 6578 6458 7 1474 633 238 71 90 chr13 116540820 116540972 -3743340 + B3 SINE B2 69 215 -1 6 1474 25 90 0 0 chr13 116542479 116542546 -3741766 + AT_rich Low_complexity Low_complexity 1 67 0 7 1474 387 0 0 0 chr13 116544824 116544867 -3739445 + (GA)n Simple_repeat Simple_repeat 2 44 0 7 1474 225 0 0 0 chr13 116545398 116545423 -3738889 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 7 1474 1879 68 4 11 chr13 116546016 116546283 -3738029 - Lx3_Mus LINE L1 -1 7008 6744 7 1474 668 296 82 42 chr13 116547717 116548070 -3736242 - L1MB2 LINE L1 -57 6114 5748 7 1474 595 319 106 0 chr13 116549028 116549329 -3734983 - L3b LINE CR1 -202 4306 3962 7 1474 432 0 0 0 chr13 116550324 116550372 -3733940 + (TG)n Simple_repeat Simple_repeat 2 49 0 7 1474 315 71 0 0 chr13 116550914 116550956 -3733356 + (TA)n Simple_repeat Simple_repeat 2 43 0 7 1474 252 0 0 0 chr13 116551477 116551505 -3732807 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 8 1474 1228 54 0 0 chr13 116551506 116551653 -3732659 + B1_Mus2 SINE Alu 1 147 0 8 1474 204 67 0 0 chr13 116551655 116551685 -3732627 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 8 1474 27 0 0 0 chr13 116551772 116551799 -3732513 + AT_rich Low_complexity Low_complexity 1 27 0 8 1474 24 0 0 0 chr13 116552311 116552335 -3731977 + AT_rich Low_complexity Low_complexity 1 24 0 8 1474 3711 174 118 44 chr13 116552552 116552681 -3731631 + L1_Mur1 LINE L1 1845 1972 -3914 8 1474 687 90 0 0 chr13 116552681 116552781 -3731531 + (CA)n Simple_repeat Simple_repeat 1 100 0 8 1474 3711 174 118 44 chr13 116552781 116553582 -3730730 + L1_Mur1 LINE L1 1973 2843 -3043 8 1474 310 138 45 45 chr13 116553582 116553649 -3730663 + L1_Mur1 LINE L1 2983 3049 -2837 8 1474 3245 215 56 15 chr13 116553653 116554389 -3729923 + Lx2B LINE L1 6233 6998 -2 8 1474 1082 63 23 23 chr13 116554648 116554825 -3729487 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 8 1474 299 202 13 0 chr13 116554839 116554918 -3729394 + CT-rich Low_complexity Low_complexity 2 81 0 8 1474 442 252 139 0 chr13 116554920 116555035 -3729277 - B1_Mur1 SINE Alu -7 142 12 9 1474 703 322 84 53 chr13 116555511 116555923 -3728389 + Lx8 LINE L1 6827 7238 -235 9 1474 279 0 0 0 chr13 116555923 116555954 -3728358 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 9 1474 703 322 84 53 chr13 116555954 116556109 -3728203 + Lx8 LINE L1 7239 7412 -61 9 1474 22 35 0 0 chr13 116556341 116556370 -3727942 + AT_rich Low_complexity Low_complexity 1 29 0 9 1474 189 0 0 0 chr13 116556985 116557006 -3727306 + (TCCA)n Simple_repeat Simple_repeat 2 22 0 9 1474 216 0 0 0 chr13 116557439 116557463 -3726849 + (A)n Simple_repeat Simple_repeat 1 24 0 9 1474 498 17 0 0 chr13 116558634 116558693 -3725619 + (CA)n Simple_repeat Simple_repeat 2 60 0 9 1474 245 301 140 0 chr13 116559695 116559788 -3724524 + RSINE1 SINE B4 10 115 -50 9 1474 1020 219 149 33 chr13 116559866 116560112 -3724200 + Lx7 LINE L1 7036 7305 -391 9 1474 180 0 0 0 chr13 116560112 116560132 -3724180 + (TA)n Simple_repeat Simple_repeat 2 21 0 9 1474 1020 219 149 33 chr13 116560132 116560220 -3724092 + Lx7 LINE L1 7306 7409 -287 9 1474 486 114 0 0 chr13 116560230 116560309 -3724003 + (TG)n Simple_repeat Simple_repeat 2 80 0 1 1474 207 171 0 0 chr13 116560485 116560520 -3723792 + T-rich Low_complexity Low_complexity 4 38 0 1 1474 803 103 9 9 chr13 116560520 116560664 -3723648 - B1_Mus2 SINE Alu 0 147 6 1 1474 21 57 0 0 chr13 116560674 116560709 -3723603 + AT_rich Low_complexity Low_complexity 1 35 0 1 1474 27 0 0 0 chr13 116560902 116560929 -3723383 + AT_rich Low_complexity Low_complexity 1 27 0 1 1474 232 294 58 19 chr13 116560946 116561050 -3723262 - L1MD2 LINE L1 -219 6140 6033 1 1474 317 24 24 0 chr13 116561733 116561775 -3722537 + (TA)n Simple_repeat Simple_repeat 1 43 0 1 1474 633 90 0 0 chr13 116562036 116562125 -3722187 + (TG)n Simple_repeat Simple_repeat 2 90 0 1 1474 366 207 82 0 chr13 116562176 116562285 -3722027 - L1M5 LINE L1 -608 5632 5516 1 1474 4152 88 25 13 chr13 116562684 116563291 -3721021 - Lx3_Mus LINE L1 -680 5206 4593 1 1474 9909 99 1 25 chr13 116563290 116564004 -3720308 + Lx3_Mus LINE L1 5208 5913 -1096 1 1474 609 14 0 0 chr13 116564004 116564074 -3720238 + (GA)n Simple_repeat Simple_repeat 2 71 0 1 1474 9909 90 3 53 chr13 116564074 116565240 -3719072 + Lx3_Mus LINE L1 5914 7009 0 1 1474 5186 258 66 13 chr13 116565526 116565858 -3718454 - Lx6 LINE L1 -208 7252 6883 1 1474 846 91 0 0 chr13 116565858 116565979 -3718333 + (TC)n Simple_repeat Simple_repeat 2 122 0 1 1474 5186 252 67 17 chr13 116565979 116567077 -3717235 - Lx6 LINE L1 -578 6882 5770 1 1474 24 0 0 0 chr13 116567194 116567218 -3717094 + AT_rich Low_complexity Low_complexity 1 24 0 1 1474 23 54 0 0 chr13 116567355 116567392 -3716920 + AT_rich Low_complexity Low_complexity 1 37 0 1 1474 220 275 12 36 chr13 116567525 116567608 -3716704 + GA-rich Low_complexity Low_complexity 2 82 0 1 1474 4888 231 72 50 chr13 116567918 116568030 -3716282 + Lx7 LINE L1 5839 5950 -1746 1 1474 582 15 0 0 chr13 116568030 116568097 -3716215 + (TC)n Simple_repeat Simple_repeat 2 68 0 1 1474 4888 231 72 50 chr13 116568097 116568514 -3715798 + Lx7 LINE L1 5951 6381 -1315 1 1474 2601 180 173 2 chr13 116568514 116569103 -3715209 - RMER6C LTR ERVK 0 690 1 1 1474 4888 231 72 50 chr13 116569103 116569956 -3714356 + Lx7 LINE L1 6382 7253 -443 1 1474 558 181 77 39 chr13 116569972 116570127 -3714185 + Lx7 LINE L1 7534 7694 -2 1 1474 258 336 58 32 chr13 116570701 116570855 -3713457 - Tigger10 DNA Tigger -705 1138 981 1 1474 325 333 75 41 chr13 116572203 116572350 -3711962 + MIRb SINE MIR 19 170 -98 1 1474 747 33 0 0 chr13 116574471 116574561 -3709751 + (GAAA)n Simple_repeat Simple_repeat 3 92 0 1 1474 235 314 0 28 chr13 116574734 116574842 -3709470 + GA-rich Low_complexity Low_complexity 2 106 0 1 1474 351 44 0 0 chr13 116574843 116574888 -3709424 + (CA)n Simple_repeat Simple_repeat 2 46 0 1 1474 297 0 0 0 chr13 116574888 116574920 -3709392 + (GA)n Simple_repeat Simple_repeat 2 34 0 1 1474 1439 69 0 24 chr13 116574951 116575160 -3709152 + L1Md_F2 LINE L1 6379 6582 0 1 1474 181 282 0 0 chr13 116575983 116576022 -3708290 - MIR SINE MIR -144 118 80 1 1474 252 0 0 0 chr13 116576309 116576337 -3707975 + (GGA)n Simple_repeat Simple_repeat 1 28 0 1 1474 2216 116 22 36 chr13 116576815 116577180 -3707132 - Lx LINE L1 0 6654 6295 1 1474 25 0 0 0 chr13 116577947 116577972 -3706340 + AT_rich Low_complexity Low_complexity 1 25 0 1 1474 469 337 106 35 chr13 116578089 116578344 -3705968 - LFSINE_Vert SINE SINE -42 417 145 1 1474 28 48 0 0 chr13 116578933 116578975 -3705337 + AT_rich Low_complexity Low_complexity 1 42 0 1 1474 411 338 101 18 chr13 116580488 116580774 -3703538 + L1MC LINE L1 4022 4331 -1815 1 1474 226 234 15 15 chr13 116580957 116581022 -3703290 + GA-rich Low_complexity Low_complexity 3 67 0 1 1474 261 350 87 42 chr13 116583413 116583699 -3700613 + Charlie24 DNA MER1_type 129 427 -2023 1 1474 225 266 36 48 chr13 116584159 116584242 -3700070 - MLT1H2 LTR MaLR -318 171 90 1 1474 1037 121 12 0 chr13 116584340 116584513 -3699799 + (CATATA)n Simple_repeat Simple_repeat 2 176 0 1 1474 1413 78 7 7 chr13 116584531 116584829 -3699483 + (CATATA)n Simple_repeat Simple_repeat 1 298 0 1 1474 387 0 0 0 chr13 116584833 116584876 -3699436 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1474 1373 246 21 63 chr13 116584879 116585304 -3699008 - Lx7 LINE L1 -458 7238 6832 1 1474 746 172 15 0 chr13 116585729 116585863 -3698449 + URR1B DNA MER1_type 90 225 0 1 1474 21 36 0 0 chr13 116586157 116586185 -3698127 + AT_rich Low_complexity Low_complexity 1 28 0 1 1474 588 349 40 0 chr13 116586234 116586432 -3697880 + B3 SINE B2 9 214 -2 1 1474 773 275 85 8 chr13 116586635 116586870 -3697442 - ORR1D2 LTR MaLR 0 370 118 1 1474 309 323 109 77 chr13 116587026 116587311 -3697001 + ORR1E LTR MaLR 13 306 -53 1 1474 399 196 39 34 chr13 116588785 116588964 -3695348 + (TA)n Simple_repeat Simple_repeat 1 180 0 1 1474 203 0 0 36 chr13 116591394 116591422 -3692890 + (TA)n Simple_repeat Simple_repeat 2 28 0 1 1474 24 0 0 0 chr13 116591444 116591468 -3692844 + AT_rich Low_complexity Low_complexity 1 24 0 1 1474 22 56 0 0 chr13 116591507 116591543 -3692769 + AT_rich Low_complexity Low_complexity 1 36 0 1 1474 1189 177 27 14 chr13 116592789 116593012 -3691300 - URR1A DNA MER1_type 0 226 1 1 1474 522 261 15 7 chr13 116593581 116593716 -3690596 + B1_Mur2 SINE Alu 1 136 -13 1 1474 619 285 75 0 chr13 116594043 116594243 -3690069 + B3 SINE B2 2 216 0 1 1474 27 0 0 0 chr13 116594305 116594332 -3689980 + AT_rich Low_complexity Low_complexity 1 27 0 1 1474 503 347 25 15 chr13 116594350 116594552 -3689760 + B4 SINE B4 15 218 -74 1 1474 201 179 0 25 chr13 116595195 116595235 -3689077 + GA-rich Low_complexity Low_complexity 2 40 0 1 1474 285 325 118 22 chr13 116595424 116595621 -3688691 + MIRb SINE MIR 13 227 -41 1 1474 287 384 0 0 chr13 116596273 116596372 -3687940 - PB1D10 SINE Alu -16 101 3 1 1474 313 297 0 51 chr13 116596295 116596373 -3687939 - ID_B1 SINE B4 -68 156 83 1 1474 2106 233 164 2 chr13 116596689 116597227 -3687085 - RMER1B Other Other -267 799 175 1 1474 195 100 0 0 chr13 116597246 116597276 -3687036 + (CCA)n Simple_repeat Simple_repeat 3 32 0 1 1474 860 269 116 31 chr13 116597282 116597574 -3686738 - RMER1B Other Other -695 371 55 1 1474 835 335 46 0 chr13 116597675 116597979 -3686333 - MLT1B LTR MaLR -69 321 4 1 1474 486 75 0 0 chr13 116598905 116598972 -3685340 + (TC)n Simple_repeat Simple_repeat 1 67 0 1 1474 516 16 0 0 chr13 116598988 116599049 -3685263 + (TG)n Simple_repeat Simple_repeat 2 62 0 1 1474 728 284 106 23 chr13 116599757 116600154 -3684158 - Lx8 LINE L1 -5 7468 7039 1 1474 943 111 0 0 chr13 116600169 116600322 -3683990 - Lx LINE L1 -6 6648 6496 1 1474 426 305 15 65 chr13 116600468 116600668 -3683644 + B3A SINE B2 9 198 0 1 1474 3662 126 15 34 chr13 116601223 116601838 -3682474 + Lx3A LINE L1 6375 6977 -4 1 1474 6235 160 18 11 chr13 116601859 116602689 -3681623 - L1_Mur2 LINE L1 -198 5679 4840 1 1474 181 0 0 65 chr13 116602689 116602720 -3681592 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1 1474 6235 160 18 11 chr13 116602720 116602998 -3681314 - L1_Mur2 LINE L1 -1038 4839 4564 1 1474 221 316 91 87 chr13 116603962 116604215 -3680097 + L2 LINE L2 1837 2090 -1329 1 1474 236 250 156 0 chr13 116605090 116605154 -3679158 - BC1_Mm scRNA scRNA -73 79 6 1 1474 7288 124 3 10 chr13 116605521 116607215 -3677097 - L1_Mus4 LINE L1 -2 6634 4958 1 1474 545 340 5 54 chr13 116608176 116608381 -3675931 + B3A SINE B2 4 198 0 1 1474 3306 302 100 83 chr13 116608937 116611014 -3673298 + Tigger1 DNA MER2_type 9 2119 -299 1 1474 397 311 88 100 chr13 116611034 116611295 -3673017 - MTEb LTR MaLR -109 270 13 1 1474 364 358 37 0 chr13 116612239 116612373 -3671939 + B1F2 SINE Alu 10 148 -1 1 1474 417 39 0 0 chr13 116613175 116613226 -3671086 + (TA)n Simple_repeat Simple_repeat 2 52 0 1 1474 21 0 0 0 chr13 116614374 116614395 -3669917 + AT_rich Low_complexity Low_complexity 1 21 0 1 1474 234 174 0 0 chr13 116615002 116615048 -3669264 + T-rich Low_complexity Low_complexity 1 46 0 1 1474 21 36 0 0 chr13 116616915 116616943 -3667369 + AT_rich Low_complexity Low_complexity 1 28 0 1 1474 773 168 0 6 chr13 116617277 116617433 -3666879 + CT-rich Low_complexity Low_complexity 2 156 0 1 1474 1204 48 0 7 chr13 116617440 116617587 -3666725 - B1_Mus2 SINE Alu 0 147 2 1 1474 300 277 83 23 chr13 116617656 116617789 -3666523 - Lx7 LINE L1 -520 7176 7036 1 1474 1037 225 55 0 chr13 116617825 116618096 -3666216 + L1_Mur3 LINE L1 1541 1826 -4054 1 1474 1470 331 46 73 chr13 116618116 116618982 -3665330 - Lx8 LINE L1 -350 7123 6281 1 1474 293 349 73 76 chr13 116618977 116619318 -3664994 + Lx8 LINE L1 7134 7473 0 1 1474 238 293 63 108 chr13 116619559 116619670 -3664642 + MT2B LTR ERVL 158 263 -338 1 1474 619 210 40 16 chr13 116619582 116619708 -3664604 + B1_Mur4 SINE Alu 22 150 0 1 1474 952 146 6 6 chr13 116619718 116619897 -3664415 + GA-rich Low_complexity Low_complexity 2 180 0 1 1474 387 0 0 0 chr13 116619897 116619940 -3664372 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 1 1474 726 72 0 0 chr13 116619940 116620037 -3664275 + (GAAA)n Simple_repeat Simple_repeat 4 100 0 1 1474 338 348 55 6 chr13 116620436 116620601 -3663711 - ORR1E LTR MaLR -186 173 1 1 1474 296 354 10 8 chr13 116621287 116621437 -3662875 + MIR SINE MIR 9 159 -109 1 1474 396 0 0 0 chr13 116621637 116621681 -3662631 + (TG)n Simple_repeat Simple_repeat 2 45 0 1 1474 3264 219 75 28 chr13 116621681 116622499 -3661813 - Lx9 LINE L1 -193 7451 6596 1 1474 515 276 30 60 chr13 116622499 116622665 -3661647 + 7SK RNA RNA 5 165 -166 1 1474 1009 311 74 21 chr13 116622736 116623454 -3660858 - L1M2 LINE L1 -825 5318 4563 1 1474 703 250 0 0 chr13 116623688 116623820 -3660492 - B1_Mur2 SINE Alu -17 132 1 1 1474 420 301 0 99 chr13 116623820 116623839 -3660473 - ID_B1 SINE B4 -17 207 72 1 1474 462 18 0 0 chr13 116624095 116624150 -3660162 + (TA)n Simple_repeat Simple_repeat 2 56 0 1 1474 763 224 66 9 chr13 116624731 116624943 -3659369 + Lx4B LINE L1 6814 7037 -21 1 1474 288 0 0 0 chr13 116624943 116624975 -3659337 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2 1474 21 0 0 0 chr13 116626387 116626408 -3657904 + AT_rich Low_complexity Low_complexity 1 21 0 2 1474 285 204 0 0 chr13 116626484 116626538 -3657774 + L5 LINE RTE 2212 2265 0 2 1474 226 267 17 0 chr13 116626853 116626913 -3657399 - MamRep38 DNA hAT -34 261 201 2 1474 189 352 32 32 chr13 116628424 116628550 -3655762 - L3 LINE CR1 -294 4195 4070 2 1474 302 250 92 20 chr13 116629038 116629136 -3655176 - L2a LINE L2 -19 3407 3303 2 1474 333 68 0 0 chr13 116630624 116630668 -3653644 + (GA)n Simple_repeat Simple_repeat 2 45 0 2 1474 219 69 0 0 chr13 116630662 116630691 -3653621 + (GAAAA)n Simple_repeat Simple_repeat 5 33 0 2 1474 264 337 82 0 chr13 116630772 116630870 -3653442 - LTR16A1 LTR ERVL -24 432 327 2 1474 641 160 47 0 chr13 116631219 116631325 -3652987 + RMER6B LTR ERVK 1 111 -350 2 1474 1656 176 104 35 chr13 116631325 116631756 -3652556 + RMER6B LTR ERVK 1 461 0 2 1474 504 0 0 0 chr13 116631912 116631968 -3652344 + (TAGA)n Simple_repeat Simple_repeat 1 56 0 2 1474 25 31 0 0 chr13 116632300 116632332 -3651980 + AT_rich Low_complexity Low_complexity 1 32 0 2 1474 191 62 62 0 chr13 116632332 116632364 -3651948 + (CTAAT)n Simple_repeat Simple_repeat 3 36 0 2 1474 489 304 77 5 chr13 116632502 116632697 -3651615 + B3 SINE B2 1 209 -7 2 1474 2116 124 128 10 chr13 116633270 116633668 -3650644 - RLTR44E LTR ERVK -7 445 1 2 1474 290 360 45 17 chr13 116633916 116634094 -3650218 - MER2 DNA MER2_type -8 337 155 2 1474 202 315 0 0 chr13 116634853 116634907 -3649405 + C-rich Low_complexity Low_complexity 5 58 0 2 1474 243 191 0 0 chr13 116634950 116635018 -3649294 + CT-rich Low_complexity Low_complexity 2 69 0 2 1474 190 270 0 98 chr13 116635158 116635240 -3649072 + L4 LINE RTE 625 698 -1331 2 1474 575 153 22 56 chr13 116635278 116635458 -3648854 + (TATATG)n Simple_repeat Simple_repeat 3 176 0 2 1474 213 340 0 109 chr13 116635906 116636025 -3648287 - L2 LINE L2 -776 2643 2538 2 1474 480 18 0 0 chr13 116636488 116636545 -3647767 + (TG)n Simple_repeat Simple_repeat 2 58 0 2 1474 21 0 0 0 chr13 116637730 116637751 -3646561 + AT_rich Low_complexity Low_complexity 1 21 0 2 1474 3570 8 2 0 chr13 116637919 116638314 -3645998 + MTA_Mm LTR MaLR 1 396 0 2 1474 1064 94 0 27 chr13 116638652 116638837 -3645475 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1474 353 56 40 27 chr13 116638966 116639040 -3645272 + (CAAA)n Simple_repeat Simple_repeat 2 76 0 2 1474 671 112 9 0 chr13 116639339 116639446 -3644866 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 2 1474 5230 89 37 1 chr13 116639454 116640192 -3644120 - L1_Mus3 LINE L1 -5 6633 5870 2 1474 2603 139 0 2 chr13 116640192 116640604 -3643708 + L1_Mm LINE L1 4587 4997 -886 2 1474 935 159 354 21 chr13 116640628 116640916 -3643396 + ORR1C2 LTR MaLR 1 384 0 2 1474 464 72 14 0 chr13 116643773 116643842 -3640470 + (TA)n Simple_repeat Simple_repeat 2 71 0 2 1474 387 0 0 0 chr13 116644467 116644510 -3639802 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1474 207 0 0 0 chr13 116646991 116647014 -3637298 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 2 1474 319 356 28 28 chr13 116647048 116647230 -3637082 - L2c LINE L2 -180 3207 3026 2 1474 759 92 0 0 chr13 116647796 116647905 -3636407 + (TTCC)n Simple_repeat Simple_repeat 3 111 0 2 1474 186 71 0 0 chr13 116647935 116647963 -3636349 + (TG)n Simple_repeat Simple_repeat 2 29 0 2 1474 786 200 14 7 chr13 116647967 116648113 -3636199 - B1_Mur2 SINE Alu -1 148 2 2 1474 356 228 50 19 chr13 116648143 116648304 -3636008 - Lx9 LINE L1 -8 7636 7471 2 1474 662 164 0 7 chr13 116648345 116648492 -3635820 + (CA)n Simple_repeat Simple_repeat 1 146 0 2 1474 2995 253 41 24 chr13 116648493 116649363 -3634949 - Lx9 LINE L1 -230 7414 6530 2 1474 22 35 0 0 chr13 116649485 116649514 -3634798 + AT_rich Low_complexity Low_complexity 1 29 0 2 1474 561 52 0 0 chr13 116650324 116650401 -3633911 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1474 37 23 0 0 chr13 116651321 116651365 -3632947 + AT_rich Low_complexity Low_complexity 1 44 0 2 1474 279 184 0 0 chr13 116652096 116652145 -3632167 + Lx4A LINE L1 6750 6798 -260 2 1474 7235 176 20 4 chr13 116652144 116653823 -3630489 + Lx3C LINE L1 5269 6974 -2 2 1474 552 200 21 2 chr13 116653848 116653991 -3630321 + Lx2B LINE L1 5924 6067 -933 2 184 1959 117 14 0 chr13 116653991 116654281 -3630031 - ORR1A2 LTR MaLR 0 327 34 2 1475 5250 139 66 5 chr13 116654289 116655172 -3629140 + Lx2B LINE L1 6063 6999 -1 2 1475 8672 145 35 5 chr13 116655178 116656834 -3627478 - Lx2 LINE L1 -1 6996 5284 2 1475 3697 164 33 38 chr13 116658411 116659098 -3625214 - RMER6A LTR ERVK 0 756 65 2 1475 195 69 0 0 chr13 116659098 116659127 -3625185 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 2 1475 1147 64 0 0 chr13 116659128 116659269 -3625043 - B1_Mm SINE Alu -6 141 1 2 1475 3697 164 33 38 chr13 116659269 116659339 -3624973 - RMER6A LTR ERVK -692 64 1 2 1475 214 189 24 48 chr13 116659628 116659795 -3624517 + (CATATA)n Simple_repeat Simple_repeat 6 168 0 2 1475 297 0 0 0 chr13 116659795 116659828 -3624484 + (TG)n Simple_repeat Simple_repeat 2 34 0 2 1475 327 49 0 0 chr13 116660599 116660640 -3623672 + (TC)n Simple_repeat Simple_repeat 2 42 0 2 1475 1965 267 11 15 chr13 116661106 116661581 -3622731 - Lx6 LINE L1 -179 7281 6809 2 1475 695 120 8 0 chr13 116661601 116661718 -3622594 + (TAGA)n Simple_repeat Simple_repeat 4 121 0 2 1475 1696 222 82 5 chr13 116662054 116662421 -3621891 - Lx6 LINE L1 -274 7186 6792 2 1475 35 0 0 0 chr13 116662423 116662458 -3621854 + AT_rich Low_complexity Low_complexity 1 35 0 2 1475 21 71 0 0 chr13 116662559 116662601 -3621711 + AT_rich Low_complexity Low_complexity 1 42 0 2 1475 324 0 0 0 chr13 116663615 116663651 -3620661 + (TC)n Simple_repeat Simple_repeat 1 36 0 2 1475 366 23 0 0 chr13 116663651 116663693 -3620619 + (CA)n Simple_repeat Simple_repeat 1 43 0 2 1475 6470 82 58 1 chr13 116663817 116664741 -3619571 + Lx3_Mus LINE L1 6033 7009 0 2 1475 26 30 0 0 chr13 116665038 116665071 -3619241 + AT_rich Low_complexity Low_complexity 1 33 0 2 1475 3099 177 47 6 chr13 116665113 116665734 -3618578 + RMER6A LTR ERVK 111 756 0 2 1475 2387 243 33 13 chr13 116665735 116666348 -3617964 - Lx6 LINE L1 -1245 6215 5591 2 1475 1953 211 11 21 chr13 116666347 116666821 -3617491 - Lx6 LINE L1 -549 5331 4863 2 1475 397 298 33 13 chr13 116666813 116666966 -3617346 + Lx6 LINE L1 6217 6372 -1088 2 1475 4070 48 6 16 chr13 116666962 116667172 -3617140 + L1Md_F2 LINE L1 5759 5971 -611 2 1475 3429 73 15 2 chr13 116667172 116667452 -3616860 + L1Md_F2 LINE L1 6095 6377 -205 2 1475 195 100 0 0 chr13 116667452 116667482 -3616830 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1475 3429 73 15 2 chr13 116667482 116667660 -3616652 + L1Md_F2 LINE L1 6378 6558 -24 2 1475 181 0 33 33 chr13 116667660 116667690 -3616622 + (TAA)n Simple_repeat Simple_repeat 1 30 0 2 1475 4753 65 2 14 chr13 116667696 116668324 -3615988 + L1Md_F2 LINE L1 5963 6582 0 2 1475 1032 114 0 0 chr13 116668341 116668481 -3615831 + B1_Mus2 SINE Alu 2 141 -6 2 1475 201 139 0 0 chr13 116668487 116668530 -3615782 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2 1475 2102 260 56 9 chr13 116668530 116669082 -3615230 + Lx6 LINE L1 6363 6940 -520 2 1475 243 307 0 13 chr13 116669084 116669160 -3615152 + Lx6 LINE L1 6675 6749 -711 2 1475 209 319 0 14 chr13 116669599 116669669 -3614643 + MER5A DNA MER1_type 8 76 -113 2 1475 1321 57 20 0 chr13 116669683 116669929 -3614383 + (TCTCCC)n Simple_repeat Simple_repeat 1 250 0 2 1475 349 181 27 14 chr13 116669929 116670002 -3614310 - HAL1-3A_ME LINE L1 -810 2048 1975 2 1475 215 140 0 20 chr13 116670079 116670130 -3614182 + (TG)n Simple_repeat Simple_repeat 1 50 0 2 1475 429 20 0 0 chr13 116670696 116670746 -3613566 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1475 1459 233 83 3 chr13 116670826 116671162 -3613150 + SSU-rRNA_Hsa rRNA rRNA 1331 1693 -176 2 1475 267 290 0 0 chr13 116671163 116671225 -3613087 + MER5A DNA MER1_type 128 189 0 2 1475 3384 35 2 0 chr13 116672983 116673377 -3610935 - MTA_Mm LTR MaLR -1 395 1 2 1475 1303 103 0 11 chr13 116673551 116673738 -3610574 + B2_Mm2 SINE B2 2 186 -9 2 1475 504 0 0 0 chr13 116673866 116673922 -3610390 + (GA)n Simple_repeat Simple_repeat 1 56 0 2 1475 3478 171 68 42 chr13 116674487 116675331 -3608981 - L1_Mur3 LINE L1 -2167 3713 2848 2 1475 398 229 129 111 chr13 116675407 116675546 -3608766 + Lx9 LINE L1 7305 7443 -201 2 1475 234 62 0 0 chr13 116675546 116675578 -3608734 + (CA)n Simple_repeat Simple_repeat 2 33 0 2 1475 398 229 129 111 chr13 116675578 116675772 -3608540 + Lx9 LINE L1 7444 7644 0 2 1475 421 241 37 6 chr13 116676411 116676574 -3607738 + Lx9 LINE L1 7477 7644 0 2 1475 205 161 0 0 chr13 116676699 116676730 -3607582 + polypyrimidine Low_complexity Low_complexity 3 33 0 2 1475 24 0 0 0 chr13 116676739 116676763 -3607549 + AT_rich Low_complexity Low_complexity 1 24 0 2 1475 212 342 108 76 chr13 116678488 116678934 -3605378 - L2 LINE L2 -980 2439 1980 2 1475 351 0 0 0 chr13 116679098 116679137 -3605175 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 2 1475 2669 11 4 212 chr13 116679269 116679732 -3604580 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1475 1005 92 159 0 chr13 116679732 116679895 -3604417 + IAPEz-int LTR ERVK 8 196 -6285 2 1475 53627 26 21 8 chr13 116679866 116686249 -3598063 + IAPEz-int LTR ERVK 67 6481 0 2 1475 2669 11 4 212 chr13 116686249 116686712 -3597600 + IAPLTR1_Mm LTR ERVK 1 367 0 2 1475 1087 81 6 6 chr13 116686714 116686875 -3597437 + (TTC)n Simple_repeat Simple_repeat 3 163 0 2 1475 226 288 116 58 chr13 116687104 116687277 -3597035 - ORR1E LTR MaLR -174 185 3 2 1475 3544 112 64 9 chr13 116687372 116687665 -3596647 + Lx2 LINE L1 6388 6694 -303 2 1475 324 0 0 0 chr13 116687665 116687701 -3596611 + (CA)n Simple_repeat Simple_repeat 2 37 0 2 1475 3544 112 64 9 chr13 116687701 116687985 -3596327 + Lx2 LINE L1 6695 6997 0 2 1475 230 0 33 0 chr13 116687989 116688019 -3596293 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2 1475 221 114 68 0 chr13 116688202 116688246 -3596066 + T-rich Low_complexity Low_complexity 4 50 0 2 1475 402 154 0 0 chr13 116688389 116688467 -3595845 + CT-rich Low_complexity Low_complexity 1 78 0 2 1475 27 49 0 0 chr13 116688615 116688656 -3595656 + AT_rich Low_complexity Low_complexity 1 41 0 2 1475 7334 102 25 4 chr13 116688656 116689718 -3594594 - Lx3_Mus LINE L1 0 7009 5926 2 1475 2146 129 30 0 chr13 116689727 116690059 -3594253 + Lx3A LINE L1 5587 5928 -1053 2 1475 304 400 9 0 chr13 116691588 116691693 -3592619 + B1F SINE Alu 13 118 -31 3 1475 513 71 0 0 chr13 116691751 116691821 -3592491 + (GA)n Simple_repeat Simple_repeat 1 70 0 3 1475 3210 98 2 2 chr13 116691837 116692288 -3592024 + L1_Mus2 LINE L1 6115 6565 -1 3 1475 289 243 0 0 chr13 116692936 116693010 -3591302 + (TCTCTG)n Simple_repeat Simple_repeat 3 76 0 3 1475 321 26 0 0 chr13 116693072 116693110 -3591202 + (TG)n Simple_repeat Simple_repeat 2 39 0 3 1475 21 0 0 0 chr13 116693110 116693131 -3591181 + AT_rich Low_complexity Low_complexity 1 21 0 3 1475 27 49 0 0 chr13 116695203 116695244 -3589068 + AT_rich Low_complexity Low_complexity 1 41 0 3 1475 708 98 0 0 chr13 116695488 116695590 -3588722 + (TA)n Simple_repeat Simple_repeat 2 103 0 3 1475 1089 156 60 10 chr13 116695590 116695791 -3588521 - Lx3C LINE L1 -18 6958 6748 3 1475 1528 215 150 22 chr13 116696276 116696723 -3587589 - RMER19C LTR ERVK 0 611 108 3 1475 1412 260 80 25 chr13 116697242 116697644 -3586668 - Lx5 LINE L1 -3 7047 6624 3 1475 727 112 0 0 chr13 116697643 116697750 -3586562 + L1_Mur2 LINE L1 4832 4938 -939 3 1475 996 270 17 138 chr13 116697751 116698163 -3586149 + RMER19C LTR ERVK 2 363 -248 3 1475 444 337 114 18 chr13 116698493 116698765 -3585547 + Lx8 LINE L1 7080 7377 -96 3 1475 294 73 0 0 chr13 116698765 116698806 -3585506 + (GGAA)n Simple_repeat Simple_repeat 1 41 0 3 1475 291 28 0 0 chr13 116699030 116699066 -3585246 + (TAA)n Simple_repeat Simple_repeat 1 36 0 3 1475 2321 93 6 25 chr13 116699989 116700354 -3583958 - L1_Mus3 LINE L1 -1 6637 6280 3 1475 252 0 0 0 chr13 116702961 116702989 -3581323 + (TA)n Simple_repeat Simple_repeat 2 29 0 3 1475 21 0 0 0 chr13 116703310 116703331 -3580981 + AT_rich Low_complexity Low_complexity 1 21 0 3 1475 2089 269 89 3 chr13 116704783 116705379 -3578933 + Lx8 LINE L1 6218 6864 -609 3 1475 289 250 152 17 chr13 116705429 116705547 -3578765 + Lx8 LINE L1 7240 7373 -100 3 1475 376 234 15 38 chr13 116706778 116706911 -3577401 + (TCTCTG)n Simple_repeat Simple_repeat 2 131 0 3 1475 344 321 39 21 chr13 116708109 116708395 -3575917 - HAL1 LINE L1 -737 1770 1480 3 1475 204 40 0 0 chr13 116708487 116708512 -3575800 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 3 1475 392 291 27 107 chr13 116709170 116709320 -3574992 - B3A SINE B2 -18 180 43 3 1475 949 253 117 8 chr13 116709360 116709664 -3574648 - Lx5 LINE L1 -603 6455 6135 3 1475 328 265 202 32 chr13 116709645 116709898 -3574414 + L1MC LINE L1 4373 4668 -1478 3 1475 33 43 0 0 chr13 116710796 116710843 -3573469 + AT_rich Low_complexity Low_complexity 1 47 0 3 1475 21 36 0 0 chr13 116711123 116711151 -3573161 + AT_rich Low_complexity Low_complexity 1 28 0 3 1475 441 165 0 0 chr13 116711163 116711242 -3573070 - Lx4A LINE L1 -1002 6056 5978 3 1475 5142 173 55 8 chr13 116711247 116712202 -3572110 + Lx4A LINE L1 6056 7055 -3 3 1475 738 156 0 0 chr13 116713009 116713144 -3571168 + (TTGG)n Simple_repeat Simple_repeat 2 136 0 3 1475 746 294 133 27 chr13 116713215 116713516 -3570796 - MTEb LTR MaLR -33 346 14 3 1475 1088 198 0 23 chr13 116714164 116714353 -3569959 + RMER1C Other Other 1010 1195 -147 3 1475 1075 117 6 11 chr13 116714353 116714534 -3569778 + (TCC)n Simple_repeat Simple_repeat 1 180 0 3 1475 1088 198 0 23 chr13 116714534 116714561 -3569751 + RMER1C Other Other 1196 1221 -121 3 1475 489 34 0 0 chr13 116714565 116714624 -3569688 + (TCC)n Simple_repeat Simple_repeat 3 61 0 3 1475 409 210 89 10 chr13 116714630 116714731 -3569581 + RMER1C Other Other 1231 1339 -3 3 1475 238 163 41 0 chr13 116714761 116714810 -3569502 + A-rich Low_complexity Low_complexity 5 55 0 3 1475 32 43 0 0 chr13 116715453 116715499 -3568813 + AT_rich Low_complexity Low_complexity 1 46 0 3 1475 333 0 0 0 chr13 116715662 116715699 -3568613 + (TG)n Simple_repeat Simple_repeat 1 37 0 3 1475 3493 32 82 0 chr13 116716111 116716550 -3567762 + IAPLTR2_Mm LTR ERVK 1 475 0 3 1475 24 53 0 0 chr13 116717172 116717210 -3567102 + AT_rich Low_complexity Low_complexity 1 38 0 3 1475 251 254 127 0 chr13 116717693 116717756 -3566556 - ID2 SINE ID 0 83 13 3 1475 231 275 57 14 chr13 116717774 116717844 -3566468 - PB1D10 SINE Alu -9 108 36 3 1475 227 123 55 28 chr13 116718208 116718317 -3565995 + A-rich Low_complexity Low_complexity 1 112 0 3 1475 324 165 33 0 chr13 116718445 116718536 -3565776 + CT-rich Low_complexity Low_complexity 1 94 0 3 1475 342 0 0 0 chr13 116719818 116719856 -3564456 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1475 375 23 0 0 chr13 116719982 116720026 -3564286 + (TG)n Simple_repeat Simple_repeat 2 45 0 3 1475 395 346 57 27 chr13 116720419 116720790 -3563522 + L1M2 LINE L1 3762 4143 -2000 3 1475 1209 109 0 0 chr13 116720850 116721072 -3563240 + (TTCC)n Simple_repeat Simple_repeat 1 222 0 3 1475 23 33 0 0 chr13 116721257 116721287 -3563025 + AT_rich Low_complexity Low_complexity 1 30 0 3 1475 1291 209 25 45 chr13 116721412 116721698 -3562614 + Lx5 LINE L1 6759 7038 -12 3 1475 582 15 0 0 chr13 116721724 116721791 -3562521 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 3 1475 651 294 91 17 chr13 116721940 116722293 -3562019 + L1M2 LINE L1 4667 5045 -1098 3 1475 537 30 0 0 chr13 116722293 116722360 -3561952 + (TG)n Simple_repeat Simple_repeat 1 67 0 3 1475 21 0 0 0 chr13 116722957 116722978 -3561334 + AT_rich Low_complexity Low_complexity 1 21 0 3 1475 248 188 16 0 chr13 116723124 116723188 -3561124 + (TA)n Simple_repeat Simple_repeat 1 65 0 3 1475 439 294 7 20 chr13 116724737 116724883 -3559429 - RSINE1 SINE B4 -19 146 3 3 1475 193 237 0 0 chr13 116724954 116724992 -3559320 - L2a LINE L2 -10 3416 3379 3 1475 250 412 54 9 chr13 116725810 116726033 -3558279 - MIR SINE MIR -23 239 7 3 1475 2675 99 16 0 chr13 116727446 116727831 -3556481 + Lx3_Mus LINE L1 6611 7001 -8 3 1475 230 373 67 0 chr13 116727854 116727988 -3556324 + MLT1A0 LTR MaLR 218 360 -5 3 1475 734 295 36 0 chr13 116728056 116728249 -3556063 + B4A SINE B4 8 207 -85 3 1475 1465 153 11 14 chr13 116728256 116728535 -3555777 + Lx4B LINE L1 6134 6411 -647 3 1475 1193 184 79 28 chr13 116728534 116728825 -3555487 + Lx4B LINE L1 6725 7030 -28 3 1475 606 109 0 0 chr13 116728940 116729032 -3555280 + (CA)n Simple_repeat Simple_repeat 1 92 0 3 1475 325 303 92 55 chr13 116729078 116729242 -3555070 + MLT1A0 LTR MaLR 172 341 -24 3 1475 7330 61 6 3 chr13 116729358 116730588 -3553724 - L1Md_F2 LINE L1 0 6582 5353 3 1475 1096 48 0 46 chr13 116730601 116730753 -3553559 + B1_Mm SINE Alu 2 146 -1 3 1475 290 273 0 25 chr13 116730764 116730843 -3553469 - MLT1C LTR MaLR -371 96 20 3 1475 1019 117 7 0 chr13 116731236 116731381 -3552931 - B1_Mus1 SINE Alu -2 146 1 3 1475 21 36 0 0 chr13 116731442 116731470 -3552842 + AT_rich Low_complexity Low_complexity 1 28 0 3 1475 2072 332 54 9 chr13 116731695 116732658 -3551654 + Lx8 LINE L1 6346 7351 -122 3 1475 834 147 6 6 chr13 116732657 116732815 -3551497 + Lx5 LINE L1 4259 4416 -1461 3 1475 384 130 234 0 chr13 116732815 116732892 -3551420 - RMER4A LTR ERVK 0 466 372 3 1475 4943 195 50 43 chr13 116732896 116733686 -3550626 + Lx5 LINE L1 4615 5414 -463 3 1475 2759 85 46 10 chr13 116733686 116734079 -3550233 - MTB_Mm LTR MaLR 0 407 1 3 1475 5339 227 49 27 chr13 116734079 116735667 -3548645 + Lx5 LINE L1 5415 7045 -5 3 1475 2531 169 68 13 chr13 116736471 116736865 -3547447 + L1_Mur2 LINE L1 4814 5243 -634 3 1475 453 19 0 0 chr13 116736865 116736919 -3547393 + (TA)n Simple_repeat Simple_repeat 2 55 0 3 1475 2531 169 68 13 chr13 116736919 116737081 -3547231 + L1_Mur2 LINE L1 5244 5400 -477 3 1475 332 252 205 60 chr13 116737092 116737341 -3546971 + B4A SINE B4 2 286 -6 3 1475 522 0 0 0 chr13 116737367 116737425 -3546887 + (CA)n Simple_repeat Simple_repeat 1 58 0 3 1475 324 0 0 0 chr13 116739609 116739645 -3544667 + (TA)n Simple_repeat Simple_repeat 1 36 0 3 1475 391 287 18 9 chr13 116740128 116740237 -3544075 + B1F SINE Alu 24 133 -16 3 1475 288 0 0 0 chr13 116740237 116740269 -3544043 + (TC)n Simple_repeat Simple_repeat 1 32 0 3 1475 662 133 9 0 chr13 116740269 116740382 -3543930 + (CA)n Simple_repeat Simple_repeat 2 115 0 3 1475 321 169 0 0 chr13 116740498 116740557 -3543755 + A-rich Low_complexity Low_complexity 1 59 0 3 1475 277 226 233 10 chr13 116740573 116740676 -3543636 - RMER1C Other Other -149 1193 1068 3 1475 416 304 71 65 chr13 116740759 116741164 -3543148 - RMER1B Other Other -574 768 123 3 1475 434 346 126 16 chr13 116741832 116742060 -3542252 + Lx8 LINE L1 6996 7253 -220 3 1475 239 0 32 0 chr13 116742060 116742091 -3542221 + (ATTG)n Simple_repeat Simple_repeat 1 32 0 3 1475 434 346 126 16 chr13 116742091 116742235 -3542077 + Lx8 LINE L1 7254 7408 -65 3 1475 347 346 0 0 chr13 116742267 116742345 -3541967 - PB1D10 SINE Alu -37 80 3 3 1475 524 295 51 47 chr13 116742943 116743199 -3541113 + MIR SINE MIR 4 260 -2 3 1475 336 37 19 0 chr13 116743769 116743823 -3540489 + L1_Mus3 LINE L1 6575 6629 -9 3 1475 365 250 0 27 chr13 116744037 116744148 -3540164 + Lx2B LINE L1 6886 6993 -7 3 1475 21 0 0 0 chr13 116744162 116744183 -3540129 + AT_rich Low_complexity Low_complexity 1 21 0 3 1475 2423 50 0 3 chr13 116744694 116744996 -3539316 + L1Md_F3 LINE L1 6282 6582 -2 3 1475 286 267 11 28 chr13 116745826 116746003 -3538309 + L1_Rod LINE L1 1583 1756 -4091 3 1475 3530 65 0 10 chr13 116746059 116746540 -3537772 - L1Md_F2 LINE L1 -23 6559 6084 3 1475 1287 275 83 37 chr13 116746542 116747252 -3537060 + L1_Rod LINE L1 1771 2513 -3334 3 1475 766 256 92 105 chr13 116747308 116747525 -3536787 + L1_Rod LINE L1 3245 3486 -2361 3 1475 183 42 0 0 chr13 116747525 116747549 -3536763 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3 1475 766 256 92 105 chr13 116747549 116747638 -3536674 + L1_Rod LINE L1 3487 3580 -2267 3 1475 793 76 122 0 chr13 116747638 116747769 -3536543 - L1_Mus2 LINE L1 0 6566 6420 3 1475 766 256 92 105 chr13 116747769 116748146 -3536166 + L1_Rod LINE L1 3581 3919 -1928 3 1475 280 187 37 74 chr13 116748199 116748361 -3535951 + (TTATA)n Simple_repeat Simple_repeat 2 157 0 3 1475 613 262 85 16 chr13 116748362 116748680 -3535632 + L1_Mur3 LINE L1 3996 4335 -1545 3 1475 1722 53 0 17 chr13 116749093 116749323 -3534989 + L1Md_F3 LINE L1 6356 6581 -3 3 1475 261 0 0 0 chr13 116749472 116749501 -3534811 + (A)n Simple_repeat Simple_repeat 1 29 0 3 1475 33633 73 6 15 chr13 116749518 116755000 -3529312 + L1Md_F2 LINE L1 518 5945 -637 3 1475 2183 54 0 0 chr13 116755001 116755277 -3529035 - L1Md_F2 LINE L1 -193 6389 6114 3 1475 804 116 0 0 chr13 116755278 116755399 -3528913 - Lx2 LINE L1 -361 6639 6519 4 1475 2997 11 45 3 chr13 116755399 116755751 -3528561 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1475 53091 23 15 2 chr13 116755751 116762144 -3522168 + IAPEz-int LTR ERVK 8 6481 0 4 1475 2997 11 45 3 chr13 116762144 116762496 -3521816 + IAPLTR1_Mm LTR ERVK 1 367 0 4 1475 2318 152 5 5 chr13 116762500 116762883 -3521429 - Lx2 LINE L1 -486 6511 6129 4 1475 1971 61 0 0 chr13 116763262 116763523 -3520789 - L1Md_F3 LINE L1 -452 6130 5870 3 1475 3964 47 10 4 chr13 116763527 116764023 -3520289 + L1Md_F3 LINE L1 6086 6584 0 3 1475 378 61 0 0 chr13 116764570 116764619 -3519693 + (T)n Simple_repeat Simple_repeat 1 49 0 4 1475 288 53 0 0 chr13 116764686 116764724 -3519588 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 4 1475 2185 108 6 0 chr13 116764876 116765190 -3519122 - L1_Mus3 LINE L1 -2 6636 6321 4 1475 225 100 60 0 chr13 116765447 116765497 -3518815 + (TA)n Simple_repeat Simple_repeat 1 53 0 4 1475 197 132 26 0 chr13 116765559 116765597 -3518715 + GA-rich Low_complexity Low_complexity 2 40 0 4 1475 490 140 9 70 chr13 116766029 116766144 -3518168 + Lx2A LINE L1 6901 7008 0 4 1475 21 0 0 0 chr13 116771525 116771546 -3512766 + AT_rich Low_complexity Low_complexity 1 21 0 4 1475 369 0 0 0 chr13 116773145 116773186 -3511126 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1475 3389 37 2 0 chr13 116775238 116775640 -3508672 + L1Md_T LINE L1 6177 6579 -3 4 1475 209 233 0 0 chr13 116776377 116776420 -3507892 + (TA)n Simple_repeat Simple_repeat 2 44 0 4 1475 737 269 59 5 chr13 116776982 116777184 -3507128 + ID_B1 SINE B4 12 224 0 4 1475 456 111 0 0 chr13 116777569 116777641 -3506671 + (CA)n Simple_repeat Simple_repeat 1 72 0 4 1475 1088 254 7 48 chr13 116777651 116777924 -3506388 + MTD LTR MaLR 4 265 -154 4 1475 3877 93 13 7 chr13 116778613 116779168 -3505144 + Lx3A LINE L1 6422 6979 -2 4 1475 21 57 0 0 chr13 116779174 116779209 -3505103 + AT_rich Low_complexity Low_complexity 1 35 0 4 1475 410 274 32 167 chr13 116781305 116781647 -3502665 + MER33 DNA MER1_type 1 296 -28 4 1475 1668 261 24 19 chr13 116781943 116782408 -3501904 - Lx6 LINE L1 -26 7434 6968 4 1475 31 44 0 0 chr13 116782600 116782645 -3501667 + AT_rich Low_complexity Low_complexity 1 45 0 4 1475 7537 80 3 3 chr13 116783370 116784500 -3499812 + L1_Mus1 LINE L1 5434 6566 -1 4 1475 209 57 0 28 chr13 116784707 116784743 -3499569 + (CAA)n Simple_repeat Simple_repeat 2 36 0 4 184 399 21 0 0 chr13 116785125 116785173 -3499139 + (TG)n Simple_repeat Simple_repeat 2 49 0 4 1476 313 118 0 38 chr13 116785370 116785423 -3498889 - U2 snRNA snRNA -137 51 1 4 1476 1030 106 0 0 chr13 116786906 116787048 -3497264 + B1_Mus1 SINE Alu 2 143 -5 4 1476 31 0 0 0 chr13 116787048 116787079 -3497233 + AT_rich Low_complexity Low_complexity 1 31 0 4 1476 336 51 51 0 chr13 116787486 116787545 -3496767 + (CA)n Simple_repeat Simple_repeat 2 63 0 4 1476 199 54 54 0 chr13 116787665 116787702 -3496610 + (TG)n Simple_repeat Simple_repeat 2 40 0 4 1476 540 297 45 13 chr13 116787955 116788112 -3496200 + RSINE1 SINE B4 4 165 0 4 1476 483 123 0 0 chr13 116788113 116788194 -3496118 + (CA)n Simple_repeat Simple_repeat 2 82 0 4 1476 8218 25 15 6 chr13 116788739 116789724 -3494588 + L1Md_F3 LINE L1 5588 6581 -3 4 1476 184 232 0 44 chr13 116789740 116789785 -3494527 - L2 LINE L2 -832 2587 2545 4 1476 666 118 0 0 chr13 116789972 116790074 -3494238 + (GGAAA)n Simple_repeat Simple_repeat 3 104 0 4 1476 2716 111 0 64 chr13 116790152 116790587 -3493725 + MTB_Mm LTR MaLR 1 407 0 4 1476 297 193 44 0 chr13 116790923 116791058 -3493254 + (TAGA)n Simple_repeat Simple_repeat 1 141 0 4 1476 262 288 14 0 chr13 116791224 116791297 -3493015 + G-rich Low_complexity Low_complexity 1 74 0 4 1476 21 36 0 0 chr13 116791375 116791403 -3492909 + AT_rich Low_complexity Low_complexity 1 28 0 4 1476 324 0 0 0 chr13 116791668 116791704 -3492608 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1476 446 205 0 164 chr13 116791704 116791838 -3492474 + Lx6 LINE L1 6740 6851 -609 4 1476 1143 270 44 3 chr13 116791943 116792281 -3492031 + Lx6 LINE L1 7105 7456 -4 4 1476 216 163 0 0 chr13 116792284 116792327 -3491985 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 4 1476 24 53 0 0 chr13 116793866 116793904 -3490408 + AT_rich Low_complexity Low_complexity 1 38 0 4 1476 246 373 36 0 chr13 116794759 116794869 -3489443 - Tigger5 DNA MER2_type -2234 172 59 4 1476 288 323 77 46 chr13 116797203 116797333 -3486979 + MLT1D LTR MaLR 1 134 -371 4 1476 270 313 67 30 chr13 116797486 116797621 -3486691 - MIRb SINE MIR -104 164 25 4 1476 315 132 0 0 chr13 116797800 116797868 -3486444 + (A)n Simple_repeat Simple_repeat 1 68 0 4 1476 1422 244 148 26 chr13 116798471 116798925 -3485387 - RMER15 LTR ERVL -45 530 22 4 1476 234 0 0 0 chr13 116799133 116799159 -3485153 + (TC)n Simple_repeat Simple_repeat 2 27 0 4 1476 351 0 0 0 chr13 116799159 116799197 -3485115 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1476 2030 254 104 3 chr13 116799200 116799797 -3484515 + Lx9 LINE L1 6350 7006 -638 4 1476 203 194 0 0 chr13 116800297 116800333 -3483979 + T-rich Low_complexity Low_complexity 1 36 0 4 1476 777 321 50 46 chr13 116802851 116803132 -3481180 - B4A SINE B4 0 292 11 4 1476 1116 165 72 10 chr13 116803450 116803658 -3480654 + RLTR20B3 LTR ERVK 1 221 -356 4 1476 633 203 7 36 chr13 116803663 116803801 -3480511 + RLTR20B3 LTR ERVK 444 577 0 4 1476 234 0 0 0 chr13 116804073 116804099 -3480213 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 4 1476 215 203 17 17 chr13 116804125 116804185 -3480127 + (TTTA)n Simple_repeat Simple_repeat 2 61 0 4 1476 3848 126 23 0 chr13 116804448 116805018 -3479294 - Lx3A LINE L1 -35 6946 6364 4 1476 22 35 0 0 chr13 116805497 116805526 -3478786 + AT_rich Low_complexity Low_complexity 1 29 0 4 1476 735 318 11 11 chr13 116806542 116806828 -3477484 + Lx5 LINE L1 6690 6975 -75 4 1476 203 117 0 118 chr13 116806846 116806914 -3477398 + (TATAA)n Simple_repeat Simple_repeat 5 64 0 4 1476 221 206 29 0 chr13 116806956 116806984 -3477328 + T-rich Low_complexity Low_complexity 44 71 0 4 1476 1098 63 0 20 chr13 116806984 116807130 -3477182 - B1_Mus2 SINE Alu 0 147 5 4 1476 221 206 29 0 chr13 116807130 116807169 -3477143 + T-rich Low_complexity Low_complexity 3 43 0 4 1476 180 0 0 0 chr13 116807794 116807814 -3476498 + (A)n Simple_repeat Simple_repeat 1 20 0 4 1476 407 275 92 95 chr13 116808800 116808937 -3475375 - Lx9 LINE L1 -20 7624 7494 4 1476 432 37 0 0 chr13 116808937 116808991 -3475321 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1476 407 275 92 95 chr13 116808991 116809202 -3475110 - Lx9 LINE L1 -151 7493 7277 4 1476 180 0 0 0 chr13 116809393 116809413 -3474899 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 4 1476 2095 111 3 36 chr13 116809413 116809749 -3474563 - Lx3A LINE L1 -13 6968 6644 4 1476 810 312 83 26 chr13 116809818 116810239 -3474073 - Lx8 LINE L1 -30 7443 6999 4 1476 321 399 112 30 chr13 116810691 116810986 -3473326 - LTR16A LTR ERVL -67 384 66 4 1476 237 132 0 0 chr13 116810994 116811032 -3473280 + (TGG)n Simple_repeat Simple_repeat 1 38 0 4 1476 496 308 90 25 chr13 116811477 116811677 -3472635 - B3 SINE B2 -3 213 1 4 1476 1935 155 16 0 chr13 116811981 116812303 -3472009 - ORR1A2 LTR MaLR 0 327 1 4 1476 630 327 79 41 chr13 116813269 116813610 -3470702 - MLT1A0 LTR MaLR 0 365 12 4 1476 694 242 0 108 chr13 116814210 116814432 -3469880 - B3A SINE B2 0 198 1 4 1476 3321 82 2 0 chr13 116814979 116815416 -3468896 - L1_Mus2 LINE L1 -1 6565 6128 4 1476 563 330 27 82 chr13 116816147 116816477 -3467835 - L3 LINE CR1 -289 4200 3889 4 1476 22 56 0 0 chr13 116816677 116816713 -3467599 + AT_rich Low_complexity Low_complexity 1 36 0 4 1476 4443 84 62 57 chr13 116816919 116817639 -3466673 + Lx3_Mus LINE L1 6286 7009 0 4 1476 568 254 47 8 chr13 116817887 116818014 -3466298 + B1F2 SINE Alu 7 138 -11 4 1476 219 69 0 0 chr13 116818016 116818045 -3466267 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 4 1476 357 320 48 43 chr13 116818056 116818242 -3466070 + L1ME1 LINE L1 5334 5520 -644 4 1476 351 0 0 0 chr13 116818372 116818411 -3465901 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 4 1476 4660 247 45 15 chr13 116818448 116819679 -3464633 + Lx9 LINE L1 6367 7634 -10 4 1476 183 42 0 0 chr13 116819975 116819999 -3464313 + (CAA)n Simple_repeat Simple_repeat 2 25 0 4 1476 481 151 1 50 chr13 116820019 116820107 -3464205 + B1_Mus1 SINE Alu 3 86 -34 4 1476 279 0 0 0 chr13 116820107 116820138 -3464174 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 4 1476 287 219 18 119 chr13 116820138 116820158 -3464154 + PB1D7 SINE Alu 87 100 -20 4 1476 229 325 61 9 chr13 116820174 116820289 -3464023 - B1_Mur4 SINE Alu -3 147 27 4 1476 255 261 68 0 chr13 116820301 116820389 -3463923 + L1MC3 LINE L1 7684 7777 -8 4 1476 459 337 113 18 chr13 116820372 116820822 -3463490 + L1ME1 LINE L1 5656 6148 -31 4 1476 361 287 106 8 chr13 116820861 116820984 -3463328 + B1F SINE Alu 9 143 -6 4 1476 266 276 20 20 chr13 116821119 116821219 -3463093 - MLT1B LTR MaLR 0 374 275 4 1476 296 301 94 94 chr13 116821309 116821489 -3462823 - MLT1B LTR MaLR -141 249 70 4 1476 218 273 0 0 chr13 116821493 116821548 -3462764 + A-rich Low_complexity Low_complexity 5 59 0 4 1476 365 175 0 0 chr13 116821820 116821883 -3462429 + MTC LTR MaLR 1 63 -358 4 1476 2866 190 94 39 chr13 116821883 116822485 -3461827 + Lx7 LINE L1 5085 5733 -147 4 1476 7323 84 9 12 chr13 116822485 116823549 -3460763 + Lx3_Mus LINE L1 5948 7008 -1 4 1476 2866 228 77 62 chr13 116823549 116823897 -3460415 + Lx7 LINE L1 5734 6087 -1609 4 1476 1036 245 62 4 chr13 116823978 116824220 -3460092 + MTC LTR MaLR 1 256 -165 4 1476 1395 305 80 20 chr13 116824227 116824964 -3459348 + Lx7 LINE L1 5806 6586 -1110 4 1476 241 274 16 0 chr13 116824964 116825026 -3459286 - Lx9 LINE L1 -459 7185 7123 4 1476 36 23 0 0 chr13 116825401 116825444 -3458868 + AT_rich Low_complexity Low_complexity 1 43 0 4 1476 381 117 0 0 chr13 116827286 116827346 -3456966 + (CA)n Simple_repeat Simple_repeat 2 61 0 4 1476 22 0 0 0 chr13 116827459 116827481 -3456831 + AT_rich Low_complexity Low_complexity 1 22 0 4 1476 240 154 0 0 chr13 116827542 116827581 -3456731 - Lx3C LINE L1 -1310 5666 5628 4 1476 5247 121 6 9 chr13 116827568 116828383 -3455929 + Lx3B LINE L1 5662 6459 -514 4 1476 1783 130 4 7 chr13 116828382 116828654 -3455658 - L1_Mus4 LINE L1 -71 6565 6295 5 1476 1442 367 108 42 chr13 116828706 116829702 -3454610 - MTE-int LTR MaLR -606 974 17 5 1476 243 0 0 0 chr13 116829703 116829730 -3454582 + (A)n Simple_repeat Simple_repeat 1 27 0 5 1476 386 223 17 59 chr13 116830051 116830170 -3454142 + Lx9 LINE L1 7376 7489 -155 5 1476 261 0 0 0 chr13 116830176 116830205 -3454107 + (GA)n Simple_repeat Simple_repeat 2 30 0 5 1476 432 0 0 0 chr13 116830214 116830262 -3454050 + (TA)n Simple_repeat Simple_repeat 2 49 0 5 1476 1071 117 0 0 chr13 116830263 116830443 -3453869 + (TG)n Simple_repeat Simple_repeat 1 180 0 5 1476 293 314 9 0 chr13 116832054 116832159 -3452153 + Lx8 LINE L1 7024 7129 -344 5 1476 294 253 33 0 chr13 116832159 116832250 -3452062 + Lx8 LINE L1 5777 5870 -10 5 1476 718 297 0 49 chr13 116832516 116832739 -3451573 + Lx8 LINE L1 6247 6458 -1015 5 1476 2533 183 69 57 chr13 116832741 116833145 -3451167 - RMER6A LTR ERVK 0 756 327 5 1476 693 0 0 0 chr13 116833145 116833222 -3451090 + (TC)n Simple_repeat Simple_repeat 2 78 0 5 1476 2533 188 72 50 chr13 116833222 116833562 -3450750 - RMER6A LTR ERVK -316 374 2 5 1476 382 319 55 59 chr13 116833568 116833788 -3450524 + Lx7 LINE L1 6463 6681 -1015 5 1476 3072 82 30 5 chr13 116833789 116834220 -3450092 + L1_Mus4 LINE L1 6171 6612 -24 5 1476 569 270 40 13 chr13 116834233 116834383 -3449929 + Lx8 LINE L1 7175 7328 -145 5 1476 507 223 74 86 chr13 116834383 116834623 -3449689 + MT2A LTR ERVL 1 266 -209 5 1476 421 233 23 91 chr13 116834620 116834752 -3449560 - URR1B DNA MER1_type -96 129 7 5 1476 433 278 152 22 chr13 116834764 116834982 -3449330 + MT2A LTR ERVL 159 447 -86 5 1476 396 0 0 0 chr13 116834982 116835026 -3449286 + (TA)n Simple_repeat Simple_repeat 2 45 0 5 1476 387 0 0 0 chr13 116835026 116835068 -3449244 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1476 316 48 0 0 chr13 116835068 116835110 -3449202 + MT2A LTR ERVL 543 584 0 5 1476 209 33 0 32 chr13 116835494 116835525 -3448787 + (TCTCCC)n Simple_repeat Simple_repeat 1 30 0 5 1476 516 319 7 14 chr13 116835549 116835695 -3448617 - B3A SINE B2 -53 145 1 5 1476 12892 58 1 3 chr13 116835799 116838146 -3446166 - L1Md_F2 LINE L1 -1 6581 4240 5 1476 22 0 0 0 chr13 116838842 116838864 -3445448 + AT_rich Low_complexity Low_complexity 1 22 0 5 1476 218 220 17 0 chr13 116839289 116839348 -3444964 + (TATATG)n Simple_repeat Simple_repeat 1 60 0 5 1476 1391 275 27 14 chr13 116839668 116840081 -3444231 + MTD LTR MaLR 2 419 0 5 1476 26 30 0 0 chr13 116840101 116840134 -3444178 + AT_rich Low_complexity Low_complexity 1 33 0 5 1476 656 312 40 22 chr13 116840289 116840515 -3443797 + RMER1C Other Other 841 1070 -272 5 1476 6857 70 20 2 chr13 116840583 116841494 -3442818 - L1_Mus1 LINE L1 0 6654 5646 5 1476 5579 110 1 2 chr13 116841494 116842297 -3442015 + L1_Mus1 LINE L1 4838 5639 -244 5 1476 868 209 42 76 chr13 116842280 116842544 -3441768 + RMER1C Other Other 1080 1334 -8 5 1476 28 48 0 0 chr13 116843287 116843329 -3440983 + AT_rich Low_complexity Low_complexity 1 42 0 5 1476 22 0 0 0 chr13 116844333 116844355 -3439957 + AT_rich Low_complexity Low_complexity 1 22 0 5 1476 405 0 0 0 chr13 116846148 116846193 -3438119 + (TTTA)n Simple_repeat Simple_repeat 3 47 0 5 1476 27 29 0 0 chr13 116848052 116848086 -3436226 + AT_rich Low_complexity Low_complexity 1 34 0 5 1476 671 208 118 34 chr13 116848810 116849014 -3435298 - URR1A DNA MER1_type -1 225 5 5 1476 899 214 270 12 chr13 116849136 116849462 -3434850 - Lx9 LINE L1 -2 7642 7233 5 1476 246 174 65 0 chr13 116849452 116849498 -3434814 + Lx9 LINE L1 6868 6916 -728 5 1476 1172 68 0 0 chr13 116850208 116850354 -3433958 + B1_Mus2 SINE Alu 2 147 0 5 1476 4137 255 64 17 chr13 116850711 116851300 -3433012 - Lx7 LINE L1 -891 6805 6170 5 1476 252 0 0 0 chr13 116851300 116851328 -3432984 + (TA)n Simple_repeat Simple_repeat 1 28 0 5 1476 6246 198 155 12 chr13 116851328 116852670 -3431642 - Lx7 LINE L1 -1527 6169 4617 5 1476 564 73 0 0 chr13 116852670 116852752 -3431560 + (TG)n Simple_repeat Simple_repeat 1 82 0 5 1476 6246 182 180 10 chr13 116852752 116852890 -3431422 - Lx7 LINE L1 -1264 4616 4434 5 1476 2739 172 73 45 chr13 116852890 116853560 -3430752 + RMER6C LTR ERVK 1 689 -1 5 1476 6246 182 180 10 chr13 116853560 116853943 -3430369 - Lx7 LINE L1 -1447 4433 4035 5 1476 915 133 0 0 chr13 116853945 116854095 -3430217 + L1_Mur1 LINE L1 3932 4081 -1805 5 1476 240 35 0 0 chr13 116854095 116854124 -3430188 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 5 1476 3451 171 11 69 chr13 116854129 116854938 -3429374 + L1_Mur2 LINE L1 2064 2825 -3052 5 1476 1290 140 0 5 chr13 116854937 116855159 -3429153 - L1_Mur3 LINE L1 -1383 4494 4274 5 1476 492 18 0 0 chr13 116855159 116855216 -3429096 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 5 1476 2662 203 80 22 chr13 116855220 116855961 -3428351 - L1_Mur3 LINE L1 -3829 2051 1268 5 1476 237 108 0 0 chr13 116855975 116856012 -3428300 + (CAT)n Simple_repeat Simple_repeat 2 38 0 5 1476 3873 235 82 93 chr13 116856022 116856554 -3427758 - Lx3C LINE L1 -17 7041 6500 5 1476 8487 27 1 0 chr13 116856554 116857548 -3426764 + L1Md_A LINE L1 5587 6581 -1 5 1476 5379 159 13 7 chr13 116857548 116858485 -3425827 - Lx3C LINE L1 -475 6501 5588 5 1476 13471 77 1 3 chr13 116858513 116861067 -3423245 - L1Md_F2 LINE L1 -12 6570 4024 5 1476 4416 235 65 19 chr13 116861063 116861898 -3422414 - L1_Mur3 LINE L1 -6483 1245 384 5 1476 7023 12 29 0 chr13 116861898 116862697 -3421615 + RLTR13B2 LTR ERVK 1 822 0 5 1476 4416 235 65 19 chr13 116862697 116862998 -3421314 - L1_Mur3 LINE L1 -7345 383 56 5 1476 655 328 48 32 chr13 116864198 116864464 -3419848 + B4 SINE B4 15 290 -2 5 1476 222 250 0 0 chr13 116864464 116864512 -3419800 + (CATATA)n Simple_repeat Simple_repeat 5 52 0 5 1476 3839 124 37 2 chr13 116865014 116865611 -3418701 + Lx2A1 LINE L1 6390 7007 -1 5 1476 3281 114 4 0 chr13 116865820 116866295 -3418017 - L1_Mm LINE L1 -719 5164 4688 5 1476 1439 64 5 0 chr13 116866295 116866482 -3417830 + L1_Mus1 LINE L1 6380 6567 0 5 1476 7472 61 2 2 chr13 116866558 116867510 -3416802 + L1Md_F2 LINE L1 5619 6570 -12 5 1476 554 108 0 10 chr13 116867508 116867611 -3416701 + L1Md_F2 LINE L1 6471 6572 -10 5 1476 346 360 26 11 chr13 116867655 116867846 -3416466 + B3A SINE B2 5 198 0 5 1476 657 0 0 0 chr13 116868335 116868408 -3415904 + (GAAA)n Simple_repeat Simple_repeat 1 73 0 5 1476 250 254 0 17 chr13 116868676 116868736 -3415576 + CT-rich Low_complexity Low_complexity 2 60 0 5 1476 21 36 0 0 chr13 116868820 116868848 -3415464 + AT_rich Low_complexity Low_complexity 1 28 0 5 1476 387 0 0 0 chr13 116869858 116869901 -3414411 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 5 1476 22 0 0 0 chr13 116871372 116871394 -3412918 + AT_rich Low_complexity Low_complexity 1 22 0 5 1476 513 143 19 19 chr13 116872028 116872135 -3412177 - ORR1B1 LTR MaLR -247 147 41 5 1476 494 307 0 63 chr13 116872264 116872438 -3411874 - RSINE1 SINE B4 0 165 3 5 1476 1270 46 17 6 chr13 116872447 116872621 -3411691 - L1Md_F2 LINE L1 -1 6581 6406 5 1476 226 329 28 50 chr13 116872746 116872925 -3411387 + RLTR21 LTR ERVK 1087 1261 -311 5 1476 518 227 201 0 chr13 116872925 116873119 -3411193 - Lx9 LINE L1 -130 7514 7282 5 1476 651 203 0 0 chr13 116873116 116873239 -3411073 - Lx9 LINE L1 -685 6959 6837 5 1476 687 40 0 48 chr13 116873240 116873344 -3410968 - L1_Mus2 LINE L1 0 6566 6468 5 1476 1261 278 54 12 chr13 116873341 116873746 -3410566 - Lx9 LINE L1 -799 6845 6424 5 1476 319 273 128 44 chr13 116874019 116874222 -3410090 - L1_Mur3 LINE L1 -7405 307 88 5 1476 1019 244 16 24 chr13 116874222 116874474 -3409838 - L1_Rod LINE L1 -134 5713 5464 5 1476 389 399 38 19 chr13 116874476 116874688 -3409624 - B4A SINE B4 -68 224 9 5 1476 464 181 0 9 chr13 116874703 116874721 -3409591 + polypyrimidine Low_complexity Low_complexity 89 105 0 5 1476 1083 100 0 22 chr13 116874721 116874905 -3409407 + (TTC)n Simple_repeat Simple_repeat 1 180 0 5 1476 962 168 4 3 chr13 116874905 116875178 -3409134 + CT-rich Low_complexity Low_complexity 1 273 0 5 1476 223 147 0 0 chr13 116875178 116875212 -3409100 + (TC)n Simple_repeat Simple_repeat 2 35 0 5 1476 21 36 0 0 chr13 116875721 116875749 -3408563 + AT_rich Low_complexity Low_complexity 1 28 0 5 1476 21 71 0 0 chr13 116875928 116875970 -3408342 + AT_rich Low_complexity Low_complexity 1 42 0 5 1476 1091 82 0 0 chr13 116876517 116876664 -3407648 + B1_Mus1 SINE Alu 2 148 0 5 1476 297 0 0 0 chr13 116876677 116876710 -3407602 + (CA)n Simple_repeat Simple_repeat 2 34 0 5 1476 231 367 75 12 chr13 116878529 116878609 -3405703 + RSINE1 SINE B4 81 165 0 5 1476 195 69 0 0 chr13 116878864 116878893 -3405419 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5 1476 22 0 0 0 chr13 116880022 116880044 -3404268 + AT_rich Low_complexity Low_complexity 1 22 0 5 1476 736 325 35 39 chr13 116880193 116880478 -3403834 - B4A SINE B4 -4 288 5 5 1476 230 284 0 15 chr13 116880627 116880695 -3403617 + ID4_ SINE ID 4 70 -13 5 1476 230 200 18 0 chr13 116880698 116880753 -3403559 + (TAA)n Simple_repeat Simple_repeat 1 56 0 5 1476 231 183 167 0 chr13 116880827 116880887 -3403425 - L1MD2 LINE L1 -384 5975 5906 5 1476 37863 31 1 0 chr13 116880890 116887340 -3396972 - L1Md_T LINE L1 0 6585 35 5 1476 1339 126 5 5 chr13 116887569 116887769 -3396543 - L1_Mm LINE L1 -208 5675 5476 5 1476 2934 140 38 25 chr13 116887765 116888132 -3396180 + L1_Mur2 LINE L1 780 1161 -5925 5 1476 974 141 45 0 chr13 116888132 116888309 -3396003 + Lx2 LINE L1 6813 6997 0 5 1476 2934 136 21 15 chr13 116888309 116888788 -3395524 + L1_Mur2 LINE L1 1162 1631 -4246 5 1476 521 301 152 35 chr13 116888821 116889598 -3394714 - L1MDa LINE L1 -4746 1887 1020 5 1476 342 0 0 0 chr13 116890311 116890349 -3393963 + (TTA)n Simple_repeat Simple_repeat 3 40 0 5 1476 7059 140 15 33 chr13 116890353 116891764 -3392548 - L1_Mus1 LINE L1 -4 6969 5618 5 1476 3242 70 59 0 chr13 116891755 116892199 -3392113 + L1_Mus1 LINE L1 5135 5604 -279 5 1476 252 250 0 0 chr13 116892666 116892718 -3391594 + (TG)n Simple_repeat Simple_repeat 1 52 0 5 1476 635 298 16 2 chr13 116892718 116892890 -3391422 - B3A SINE B2 -13 203 29 5 1476 429 226 78 0 chr13 116892996 116893111 -3391201 - RMER1B Other Other 0 1066 943 5 1476 305 143 0 0 chr13 116893110 116893159 -3391153 - RMER1A Other Other -214 816 768 5 1476 1082 301 50 27 chr13 116893161 116893499 -3390813 - RMER1A Other Other -607 423 78 5 1476 35 0 0 0 chr13 116893843 116893878 -3390434 + AT_rich Low_complexity Low_complexity 1 35 0 5 1476 232 48 0 45 chr13 116894814 116894858 -3389454 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 5 1476 1079 332 55 41 chr13 116894944 116895456 -3388856 - MTE-int LTR MaLR -846 734 216 5 1476 1608 179 88 12 chr13 116895544 116895883 -3388429 - ORR1B2 LTR MaLR -2 365 1 6 1476 1193 55 0 0 chr13 116896627 116896772 -3387540 + B1_Mm SINE Alu 3 147 0 6 1476 186 43 0 0 chr13 116898311 116898334 -3385978 + (TTG)n Simple_repeat Simple_repeat 2 24 0 6 1476 510 175 0 2 chr13 116898334 116898435 -3385877 - B1_Mus2 SINE Alu -9 140 41 6 1476 345 226 25 109 chr13 116898701 116898820 -3385492 - L1MEg1 LINE L1 -5557 678 570 6 1476 242 0 61 0 chr13 116899097 116899130 -3385182 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 6 1476 640 297 38 38 chr13 116899757 116899967 -3384345 + MLT1C LTR MaLR 256 465 -2 6 1476 1330 85 20 5 chr13 116900007 116900208 -3384104 - L1Md_F2 LINE L1 -6 6576 6373 6 1476 602 331 62 91 chr13 116900733 116901130 -3383182 - MLT2B4 LTR ERVL -54 502 4 6 1476 693 311 19 14 chr13 116901799 116902011 -3382301 + ID_B1 SINE B4 12 224 0 6 1476 340 264 142 43 chr13 116902377 116902539 -3381773 + MER58A DNA MER1_type 30 207 -17 6 1476 522 46 0 0 chr13 116902793 116902858 -3381454 + (TG)n Simple_repeat Simple_repeat 2 66 0 6 1476 25 31 0 0 chr13 116902919 116902951 -3381361 + AT_rich Low_complexity Low_complexity 1 32 0 6 1476 1263 255 53 110 chr13 116903881 116904317 -3379995 + Lx5 LINE L1 6512 6922 -128 6 1476 456 282 61 33 chr13 116904322 116904502 -3379810 + MTEa LTR MaLR 83 267 -112 6 1476 209 33 0 32 chr13 116904514 116904545 -3379767 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 6 1476 254 277 98 33 chr13 116904569 116904722 -3379590 + L1MCa LINE L1 1514 1676 -4832 6 1476 35 24 0 0 chr13 116904812 116904854 -3379458 + AT_rich Low_complexity Low_complexity 1 42 0 6 1476 322 345 0 33 chr13 116904888 116904978 -3379334 - RSINE1 SINE B4 -2 163 77 6 1476 331 246 50 78 chr13 116905058 116905199 -3379113 + L1MCa LINE L1 1972 2108 -4400 6 1476 440 327 29 61 chr13 116905259 116905516 -3378796 + L1MCa LINE L1 2171 2424 -3897 6 1476 241 100 20 20 chr13 116905516 116905567 -3378745 + (TA)n Simple_repeat Simple_repeat 2 52 0 6 1476 440 324 16 97 chr13 116905567 116905729 -3378583 + L1MCa LINE L1 2425 2573 -3748 6 1476 306 326 15 95 chr13 116905844 116906108 -3378204 + L1MCa LINE L1 2812 3054 -3267 6 1476 249 247 52 0 chr13 116906104 116906181 -3378131 - RMER1C Other Other -1 1341 1261 6 1476 585 0 0 0 chr13 116906237 116906302 -3378010 + (TC)n Simple_repeat Simple_repeat 1 65 0 6 1476 1135 331 40 15 chr13 116906303 116906775 -3377537 - Lx8 LINE L1 -248 7225 6742 6 1476 248 197 53 0 chr13 116907026 116907102 -3377210 + L1MCa LINE L1 3041 3120 -3201 6 1476 195 100 0 0 chr13 116907382 116907412 -3376900 + (CA)n Simple_repeat Simple_repeat 1 30 0 6 1476 2010 268 43 14 chr13 116907467 116908273 -3376039 + L1MCa LINE L1 3351 4180 -2141 6 1476 184 206 27 27 chr13 116908495 116908570 -3375742 + CT-rich Low_complexity Low_complexity 2 76 0 6 1476 1349 291 45 47 chr13 116909165 116909468 -3374844 + ORR1E-int LTR MaLR 1128 1444 -136 6 1476 929 137 10 67 chr13 116909468 116909663 -3374649 + Lx LINE L1 6469 6652 -2 6 1476 1349 291 45 47 chr13 116909663 116909760 -3374552 + ORR1E-int LTR MaLR 1445 1527 -53 6 1476 631 321 21 0 chr13 116909760 116909950 -3374362 + ORR1E LTR MaLR 1 194 -165 6 1476 2870 78 10 25 chr13 116910225 116910631 -3373681 - MTB LTR MaLR 0 400 1 6 1476 656 154 59 0 chr13 116910780 116910916 -3373396 - Lx2 LINE L1 -3 6994 6851 6 1476 649 244 0 22 chr13 116910919 116911057 -3373255 - B1_Mm SINE Alu 0 147 13 6 1476 612 27 0 0 chr13 116911063 116911137 -3373175 + (TG)n Simple_repeat Simple_repeat 2 75 0 6 1476 197 211 19 0 chr13 116911151 116911203 -3373109 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 6 1476 272 328 21 52 chr13 116911328 116911521 -3372791 + L1_Mur3 LINE L1 3647 3833 -2047 6 1476 233 140 60 0 chr13 116911649 116911699 -3372613 + A-rich Low_complexity Low_complexity 3 55 0 6 1476 386 313 27 96 chr13 116911758 116911977 -3372335 + RMER15 LTR ERVL 371 574 -1 6 1476 6547 62 1 11 chr13 116912729 116913580 -3370732 - L1Md_F2 LINE L1 -12 6570 5728 6 1476 300 351 27 9 chr13 116914086 116914198 -3370114 - PB1D10 SINE Alu -2 115 2 6 1476 475 291 109 15 chr13 116914243 116914749 -3369563 - L1M4b LINE L1 -4503 2584 1976 6 1476 225 108 0 0 chr13 116914845 116914882 -3369430 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1476 515 324 69 23 chr13 116914887 116915149 -3369163 - B4A SINE B4 -18 274 1 6 1476 239 104 21 0 chr13 116915660 116915708 -3368604 + (CA)n Simple_repeat Simple_repeat 2 50 0 6 1476 2151 138 6 6 chr13 116915718 116916045 -3368267 - ORR1A2 LTR MaLR 0 327 1 6 1477 39926 4 0 0 chr13 116916271 116921525 -3362787 - L1Md_A LINE L1 0 6582 1344 6 1477 3833 56 38 0 chr13 116921859 116922357 -3361955 - L1Md_F2 LINE L1 0 6582 6066 6 1477 4283 61 3 19 chr13 116922498 116923070 -3361242 + L1Md_F2 LINE L1 6019 6581 -1 6 1477 1363 320 95 32 chr13 116923602 116924289 -3360023 - Lx8 LINE L1 -216 7257 6528 6 1477 180 143 0 0 chr13 116924339 116924381 -3359931 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 6 1477 1131 75 0 14 chr13 116924381 116924529 -3359783 - B1_Mus2 SINE Alu 0 147 2 6 1477 23 0 0 0 chr13 116924702 116924725 -3359587 + AT_rich Low_complexity Low_complexity 1 23 0 6 1477 1203 61 0 0 chr13 116924832 116924979 -3359333 + B1_Mus1 SINE Alu 1 147 -1 6 1477 259 35 16 66 chr13 116924980 116925041 -3359271 + (CAAAA)n Simple_repeat Simple_repeat 3 60 0 6 1477 713 335 103 53 chr13 116925088 116925687 -3358625 + Lx8 LINE L1 6840 7468 -5 6 1477 752 196 4 0 chr13 116927784 116928016 -3356296 + (TA)n Simple_repeat Simple_repeat 1 233 0 6 1477 21 36 0 0 chr13 116929431 116929459 -3354853 + AT_rich Low_complexity Low_complexity 1 28 0 6 1477 5075 89 2 103 chr13 116931463 116931796 -3352516 - L1_Mus3 LINE L1 -5 6633 6376 6 1477 944 18 9 0 chr13 116931796 116931910 -3352402 + (TTC)n Simple_repeat Simple_repeat 2 116 0 6 1477 5075 89 2 103 chr13 116931910 116932426 -3351886 - L1_Mus3 LINE L1 -263 6375 5870 6 1477 28 48 0 0 chr13 116932860 116932902 -3351410 + AT_rich Low_complexity Low_complexity 1 42 0 6 1477 357 82 0 0 chr13 116934023 116934072 -3350240 + (TGAA)n Simple_repeat Simple_repeat 4 52 0 6 1477 22 0 0 0 chr13 116934088 116934110 -3350202 + AT_rich Low_complexity Low_complexity 1 22 0 6 1477 13881 16 0 1 chr13 116934237 116936598 -3347714 - L1Md_T LINE L1 0 6582 4260 6 1477 22 0 0 0 chr13 116937081 116937103 -3347209 + AT_rich Low_complexity Low_complexity 1 22 0 6 1477 22 0 0 0 chr13 116938141 116938163 -3346149 + AT_rich Low_complexity Low_complexity 1 22 0 6 1477 228 67 0 0 chr13 116938609 116938639 -3345673 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 6 1477 234 0 0 0 chr13 116938648 116938674 -3345638 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 6 1477 291 104 0 0 chr13 116938886 116938934 -3345378 + (CA)n Simple_repeat Simple_repeat 1 48 0 6 1477 21 0 0 0 chr13 116938934 116938955 -3345357 + AT_rich Low_complexity Low_complexity 1 21 0 6 1477 5094 55 6 3 chr13 116939380 116940034 -3344278 - L1Md_F2 LINE L1 -1 6581 5926 6 1477 246 254 18 0 chr13 116940591 116940646 -3343666 - ORR1E-int LTR MaLR -1313 57 2 6 1477 606 317 86 47 chr13 116940655 116940933 -3343379 - ORR1E LTR MaLR -6 353 65 6 1477 938 79 0 0 chr13 116940938 116941065 -3343247 + B1_Mus2 SINE Alu 21 147 0 6 1477 378 114 0 0 chr13 116941065 116941135 -3343177 + (A)n Simple_repeat Simple_repeat 1 70 0 6 1477 225 404 88 14 chr13 116941978 116942126 -3342186 - MER102c DNA MER1_type 0 331 173 6 1477 4256 164 20 7 chr13 116942209 116943042 -3341270 - L1_Mur2 LINE L1 -2454 3423 2580 6 1477 3082 206 85 5 chr13 116943040 116943946 -3340366 + Lx5 LINE L1 5404 6392 -658 6 1477 258 32 0 0 chr13 116944383 116944414 -3339898 + (GAAAA)n Simple_repeat Simple_repeat 4 34 0 6 1477 1951 301 42 12 chr13 116944414 116945148 -3339164 + Lx5 LINE L1 6455 7039 -11 6 1477 32 0 0 0 chr13 116945187 116945219 -3339093 + AT_rich Low_complexity Low_complexity 1 32 0 6 1477 444 214 177 52 chr13 116945293 116945485 -3338827 + B3 SINE B2 1 216 0 6 1477 276 225 38 0 chr13 116945497 116945577 -3338735 + Lx9 LINE L1 7395 7477 -167 6 1477 444 19 0 0 chr13 116945584 116945637 -3338675 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1477 522 240 0 43 chr13 116945661 116945822 -3338490 + Lx9 LINE L1 7483 7636 -8 6 1477 21 0 0 0 chr13 116945931 116945952 -3338360 + AT_rich Low_complexity Low_complexity 1 21 0 6 1477 254 98 20 0 chr13 116946287 116946338 -3337974 + (CAAAAA)n Simple_repeat Simple_repeat 3 54 0 6 1477 811 346 67 13 chr13 116947133 116947519 -3336793 + Lx8 LINE L1 6717 7123 -350 6 1477 820 306 68 53 chr13 116947527 116947921 -3336391 + Lx8 LINE L1 6828 7227 -246 6 1477 186 39 115 0 chr13 116947921 116947973 -3336339 + (TGG)n Simple_repeat Simple_repeat 2 59 0 6 1477 404 283 99 60 chr13 116947973 116948225 -3336087 + Lx8 LINE L1 7207 7468 -5 6 1477 31 44 0 0 chr13 116948325 116948370 -3335942 + AT_rich Low_complexity Low_complexity 1 45 0 6 1477 3991 45 8 0 chr13 116948371 116948860 -3335452 + L1Md_F3 LINE L1 6091 6583 -1 6 1477 31 26 0 0 chr13 116948923 116948961 -3335351 + AT_rich Low_complexity Low_complexity 1 38 0 6 1477 375 278 23 53 chr13 116949063 116949196 -3335116 + MLT1A1 LTR MaLR 270 398 -10 6 1477 276 313 0 0 chr13 116949437 116949504 -3334808 - ID4 SINE ID -3 80 14 6 1477 639 0 0 0 chr13 116949533 116949604 -3334708 + (TC)n Simple_repeat Simple_repeat 1 71 0 6 1477 1234 221 99 6 chr13 116949665 116949979 -3334333 - Lx4B LINE L1 -75 6983 6641 6 1477 608 249 49 19 chr13 116950262 116950467 -3333845 + L1M2 LINE L1 5392 5602 -698 6 1477 308 311 82 72 chr13 116950545 116950850 -3333462 + L1MCa LINE L1 1130 1437 -5071 6 1477 981 266 25 86 chr13 116950855 116951217 -3333095 + Lx6 LINE L1 7117 7456 -4 6 1477 271 262 12 0 chr13 116951817 116951901 -3332411 + L1MCa LINE L1 1478 1562 -4855 6 1477 767 174 0 62 chr13 116951952 116952130 -3332182 - RMER20B LTR ERVK 0 627 461 6 1477 1388 172 95 49 chr13 116952145 116952450 -3331862 - RMER20B LTR ERVK -277 350 32 6 1477 404 263 50 17 chr13 116952675 116952795 -3331517 + ID_B1 SINE B4 100 223 -1 6 1477 231 308 35 7 chr13 116952856 116953000 -3331312 + L1MCa LINE L1 1914 2061 -4341 6 1477 1233 248 125 25 chr13 116953156 116953516 -3330796 - MTD LTR MaLR 0 419 24 6 1477 293 324 59 0 chr13 116953540 116953642 -3330670 - MTD-int LTR MaLR -4 1254 1147 6 1477 310 223 21 0 chr13 116953662 116953756 -3330556 - Lx9 LINE L1 -1 7643 7548 6 1477 1307 206 58 50 chr13 116953757 116954119 -3330193 + L1_Rod LINE L1 4832 5196 -651 6 1477 513 0 0 0 chr13 116954121 116954178 -3330134 + (CA)n Simple_repeat Simple_repeat 2 58 0 6 1477 2039 182 22 15 chr13 116954179 116954570 -3329742 + RLTR16 LTR ERVK 7 401 -104 6 1477 513 0 0 0 chr13 116954570 116954627 -3329685 + (TG)n Simple_repeat Simple_repeat 2 58 0 7 1477 531 0 0 0 chr13 116954641 116954700 -3329612 + (TA)n Simple_repeat Simple_repeat 2 60 0 7 1477 566 171 0 54 chr13 116954709 116954839 -3329473 + L1_Rod LINE L1 5236 5358 -489 6 1477 247 170 24 47 chr13 116954847 116954935 -3329377 - MTD-int LTR MaLR -117 1141 1066 6 1477 1908 141 0 3 chr13 116954946 116955238 -3329074 - RLTR19 LTR ERVK -208 291 1 7 1477 750 263 181 43 chr13 116955457 116956007 -3328305 - Lx8 LINE L1 -1553 5920 5262 7 1477 237 33 0 0 chr13 116956043 116956073 -3328239 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 7 1477 21 82 0 0 chr13 116956387 116956436 -3327876 + AT_rich Low_complexity Low_complexity 1 49 0 7 1477 509 309 27 69 chr13 116956544 116956732 -3327580 - B3 SINE B2 -34 182 3 7 1477 189 0 0 0 chr13 116958466 116958487 -3325825 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 7 1477 306 275 70 45 chr13 116959033 116959189 -3325123 - L1M5 LINE L1 -403 5837 5678 7 1477 251 336 54 88 chr13 116959452 116959599 -3324713 - B3A SINE B2 -3 195 54 7 1477 683 300 28 34 chr13 116959745 116959921 -3324391 + B3 SINE B2 2 176 -40 7 1477 273 227 13 13 chr13 116960228 116960304 -3324008 - MER91B DNA Tip100 -28 162 87 7 1477 195 100 0 0 chr13 116960970 116961000 -3323312 + (A)n Simple_repeat Simple_repeat 1 30 0 7 1477 25 51 0 0 chr13 116963187 116963226 -3321086 + AT_rich Low_complexity Low_complexity 1 39 0 7 1477 858 230 10 36 chr13 116963280 116963474 -3320838 - B3 SINE B2 -27 189 1 7 1477 22 0 0 0 chr13 116963570 116963592 -3320720 + AT_rich Low_complexity Low_complexity 1 22 0 7 1477 626 115 274 0 chr13 116965954 116966067 -3318245 + B1_Mur4 SINE Alu 1 144 -6 7 1477 27 62 0 0 chr13 116966318 116966366 -3317946 + AT_rich Low_complexity Low_complexity 1 48 0 7 1477 351 65 0 0 chr13 116966563 116966609 -3317703 + (TTGTG)n Simple_repeat Simple_repeat 4 49 0 7 1477 230 194 15 46 chr13 116967825 116967909 -3316403 + A-rich Low_complexity Low_complexity 1 81 0 7 1477 812 167 14 20 chr13 116969000 116969147 -3315165 + B1_Mus1 SINE Alu 1 146 -2 7 1477 24 53 0 0 chr13 116970080 116970118 -3314194 + AT_rich Low_complexity Low_complexity 1 38 0 7 1477 482 252 85 38 chr13 116970709 116970944 -3313368 + Lx7 LINE L1 7432 7677 -19 7 1477 205 146 20 20 chr13 116970944 116970993 -3313319 + (TA)n Simple_repeat Simple_repeat 2 50 0 7 1477 39 38 0 0 chr13 116971034 116971087 -3313225 + AT_rich Low_complexity Low_complexity 1 53 0 7 1477 231 254 75 0 chr13 116971292 116971359 -3312953 + MIR SINE MIR 44 115 -147 7 1477 264 282 14 0 chr13 116971429 116971500 -3312812 + MADE2 DNA Mariner 8 79 -1 7 1477 232 300 0 39 chr13 116971725 116971829 -3312483 + L1M2 LINE L1 4919 5018 -1125 7 1477 233 246 96 110 chr13 116971850 116971996 -3312316 + L1M2 LINE L1 5514 5657 -532 7 1477 337 284 1 23 chr13 116972061 116972197 -3312115 + Lx8 LINE L1 5780 5935 -368 7 1477 285 109 0 0 chr13 116972999 116973045 -3311267 + (TG)n Simple_repeat Simple_repeat 1 46 0 7 1477 3146 43 43 0 chr13 116973055 116973449 -3310863 - IAPLTR2a LTR ERVK 0 411 1 7 1477 195 173 0 0 chr13 116973450 116973502 -3310810 + (TG)n Simple_repeat Simple_repeat 2 53 0 7 1477 567 210 0 0 chr13 116973532 116973708 -3310604 + (TG)n Simple_repeat Simple_repeat 2 177 0 7 1477 26 0 0 0 chr13 116974314 116974340 -3309972 + AT_rich Low_complexity Low_complexity 1 26 0 7 1477 519 255 43 37 chr13 116974410 116974573 -3309739 + RSINE1 SINE B4 2 165 0 7 1477 280 340 91 35 chr13 116974855 116975053 -3309259 - MLT1J LTR MaLR 0 512 304 7 1477 213 288 0 0 chr13 116975646 116975726 -3308586 + (CA)n Simple_repeat Simple_repeat 2 81 0 7 1477 409 229 64 0 chr13 116976924 116977033 -3307279 - L1ME1 LINE L1 -2 6177 6062 7 1477 7773 92 8 1 chr13 116978487 116979567 -3304745 - Lx3_Mus LINE L1 -1 7008 5921 7 1477 2883 72 0 20 chr13 116979567 116980002 -3304310 + Lx3_Mus LINE L1 5496 5920 -1089 7 1477 584 62 12 0 chr13 116980004 116980085 -3304227 + (GAAA)n Simple_repeat Simple_repeat 2 83 0 7 1477 309 330 127 44 chr13 116980492 116980673 -3303639 + B4A SINE B4 52 247 -45 7 1477 440 305 94 17 chr13 116980679 116980859 -3303453 + Lx8 LINE L1 7193 7386 -87 7 1477 1142 290 51 20 chr13 116980916 116981268 -3303044 - MTE2a LTR MaLR -16 363 1 7 1477 245 183 17 0 chr13 116981465 116981525 -3302787 + (CA)n Simple_repeat Simple_repeat 2 62 0 7 1477 396 0 0 0 chr13 116981667 116981711 -3302601 + (CA)n Simple_repeat Simple_repeat 2 45 0 7 1477 279 0 0 0 chr13 116981717 116981748 -3302564 + (CAA)n Simple_repeat Simple_repeat 3 33 0 7 1477 5975 95 57 0 chr13 116982407 116983104 -3301208 - L1_Mus3 LINE L1 -6 6632 5905 7 1477 846 0 0 0 chr13 116983104 116983198 -3301114 + (CCCTAA)n Simple_repeat Simple_repeat 1 94 0 7 1477 5975 95 57 0 chr13 116983198 116983376 -3300936 - L1_Mus3 LINE L1 -734 5904 5708 7 1477 220 270 16 0 chr13 116984159 116984222 -3300090 + GA-rich Low_complexity Low_complexity 3 66 0 7 1477 24 0 0 0 chr13 116984264 116984288 -3300024 + AT_rich Low_complexity Low_complexity 1 24 0 7 1477 1127 75 0 0 chr13 116984468 116984614 -3299698 + B1_Mm SINE Alu 2 147 0 7 1477 23 78 0 0 chr13 116984786 116984837 -3299475 + AT_rich Low_complexity Low_complexity 1 51 0 7 1477 215 402 10 10 chr13 116985214 116985317 -3298995 - MIRc SINE MIR -106 162 60 7 1477 235 264 0 0 chr13 116985391 116985444 -3298868 + (TA)n Simple_repeat Simple_repeat 1 53 0 7 1477 33 0 0 0 chr13 116985478 116985511 -3298801 + AT_rich Low_complexity Low_complexity 1 33 0 7 1477 356 312 45 0 chr13 116985522 116985634 -3298678 - PB1D10 SINE Alu 0 117 1 7 1477 1078 200 110 62 chr13 116985673 116985762 -3298550 - Lx5 LINE L1 0 7050 6955 7 1477 405 0 0 0 chr13 116985762 116985807 -3298505 + (CA)n Simple_repeat Simple_repeat 1 45 0 7 1477 1078 200 110 62 chr13 116985807 116986026 -3298286 - Lx5 LINE L1 -96 6954 6727 7 1477 520 293 26 21 chr13 116986335 116986527 -3297785 - B3A SINE B2 -5 193 1 7 1477 423 0 0 0 chr13 116986952 116986999 -3297313 + (TA)n Simple_repeat Simple_repeat 1 47 0 7 1477 469 279 132 12 chr13 116988027 116988194 -3296118 + RMER1A Other Other 138 324 -706 7 1477 284 241 23 46 chr13 116988193 116988280 -3296032 + RMER1A Other Other 573 657 -373 7 1477 450 0 0 0 chr13 116988864 116988914 -3295398 + (TC)n Simple_repeat Simple_repeat 1 50 0 7 1477 348 24 0 0 chr13 116988914 116988954 -3295358 + (CA)n Simple_repeat Simple_repeat 1 41 0 7 1477 24 53 0 0 chr13 116989744 116989782 -3294530 + AT_rich Low_complexity Low_complexity 1 38 0 7 1477 684 36 0 0 chr13 116990192 116990275 -3294037 + (GGGA)n Simple_repeat Simple_repeat 3 85 0 7 1477 450 0 0 0 chr13 116991228 116991278 -3293034 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 1477 213 65 0 0 chr13 116991383 116991414 -3292898 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 7 1477 233 119 24 0 chr13 116991776 116991818 -3292494 + (TTTTC)n Simple_repeat Simple_repeat 2 44 0 7 1477 350 141 28 0 chr13 116991946 116992017 -3292295 + GA-rich Low_complexity Low_complexity 2 74 0 7 1477 420 20 0 0 chr13 116993369 116993418 -3290894 + (CA)n Simple_repeat Simple_repeat 1 49 0 7 1477 198 0 0 0 chr13 116993655 116993677 -3290635 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 7 1477 225 0 0 0 chr13 116993808 116993833 -3290479 + (CA)n Simple_repeat Simple_repeat 2 26 0 7 1477 189 0 0 0 chr13 116993837 116993858 -3290454 + (TG)n Simple_repeat Simple_repeat 2 22 0 7 1477 214 206 14 14 chr13 116993858 116993922 -3290390 + (TA)n Simple_repeat Simple_repeat 1 64 0 7 1477 1176 106 171 17 chr13 116994343 116994582 -3289730 - Lx LINE L1 -5 6649 6374 7 1477 655 238 117 15 chr13 116994715 116994911 -3289401 - B3 SINE B2 0 216 1 7 1477 3521 59 44 2 chr13 116995851 116996308 -3288004 - L1_Mus1 LINE L1 -1 6566 6091 7 1477 219 369 37 46 chr13 116996483 116996591 -3287721 - ID_B1 SINE B4 -116 108 2 7 1477 821 330 96 25 chr13 116997441 116997795 -3286517 - MTEa LTR MaLR 0 379 1 7 1477 641 12 0 24 chr13 116998059 116998142 -3286170 + (TGG)n Simple_repeat Simple_repeat 3 83 0 7 1477 1537 230 98 23 chr13 116998482 116998878 -3285434 - Lx6 LINE L1 -1 7459 7034 7 1477 846 151 162 86 chr13 116998884 116999094 -3285218 + URR1A DNA MER1_type 1 226 0 7 1477 992 234 29 0 chr13 116999108 116999352 -3284960 - Lx7 LINE L1 -665 7031 6781 7 1477 203 194 0 0 chr13 117000529 117000565 -3283747 + T-rich Low_complexity Low_complexity 1 36 0 1 1477 592 322 71 45 chr13 117000732 117001041 -3283271 - MLT1D LTR MaLR -46 459 143 2 1477 811 127 7 36 chr13 117001041 117001180 -3283132 - URR1B DNA MER1_type 0 225 91 3 1477 285 345 8 105 chr13 117001238 117001371 -3282941 - MLT1D LTR MaLR -481 146 27 2 1477 276 321 0 0 chr13 117001477 117001558 -3282754 + ID4_ SINE ID 3 83 0 4 1477 1033 92 0 0 chr13 117001743 117001874 -3282438 + B1_Mus2 SINE Alu 4 134 -13 5 1477 470 17 17 0 chr13 117001874 117001933 -3282379 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 6 1477 276 333 77 98 chr13 117002944 117003190 -3281122 + LTR85b LTR Gypsy? 53 293 -491 7 1477 357 24 0 0 chr13 117003331 117003373 -3280939 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 8 1477 985 116 0 18 chr13 117004201 117004368 -3279944 + L1Md_F2 LINE L1 6417 6580 -2 9 1477 25 0 0 0 chr13 117006948 117006973 -3277339 + AT_rich Low_complexity Low_complexity 1 25 0 1 1477 603 0 0 0 chr13 117007209 117007276 -3277036 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1 1477 206 216 0 0 chr13 117007323 117007360 -3276952 + (TGGA)n Simple_repeat Simple_repeat 1 37 0 1 1477 323 21 0 0 chr13 117007890 117007937 -3276375 + L1Md_T LINE L1 6536 6582 0 1 1477 198 398 0 0 chr13 117008347 117008460 -3275852 - L3 LINE CR1 -2308 2181 2069 1 1477 408 158 0 0 chr13 117008943 117009019 -3275293 + CT-rich Low_complexity Low_complexity 1 76 0 1 1477 22 0 0 0 chr13 117009105 117009127 -3275185 + AT_rich Low_complexity Low_complexity 1 22 0 1 1477 630 242 8 0 chr13 117009383 117009507 -3274805 + MTC LTR MaLR 226 350 -71 1 1477 478 350 77 24 chr13 117009555 117009763 -3274549 + B4A SINE B4 10 228 -64 1 1477 23 0 0 0 chr13 117009850 117009873 -3274439 + AT_rich Low_complexity Low_complexity 1 23 0 1 1477 207 359 27 36 chr13 117011191 117011301 -3273011 - L2 LINE L2 -1241 2178 2070 2 1477 33147 86 5 12 chr13 117012213 117018584 -3265728 + L1Md_F2 LINE L1 214 6537 -45 2 1477 1609 5 0 16 chr13 117018584 117018777 -3265535 + L1Md_T LINE L1 6393 6582 0 2 1477 197 65 0 31 chr13 117019497 117019529 -3264783 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 2 1477 333 274 73 73 chr13 117020223 117020400 -3263912 - MTEb LTR MaLR -2 377 201 2 1477 228 86 0 0 chr13 117020439 117020474 -3263838 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1477 696 61 0 0 chr13 117020474 117020571 -3263741 + (GA)n Simple_repeat Simple_repeat 2 99 0 2 1477 567 112 0 0 chr13 117020936 117021025 -3263287 + (TTCC)n Simple_repeat Simple_repeat 4 92 0 2 1477 965 118 0 6 chr13 117021031 117021201 -3263111 + (TTTC)n Simple_repeat Simple_repeat 1 169 0 2 1477 602 279 36 31 chr13 117021725 117021921 -3262391 + Lx5 LINE L1 6841 7037 -13 2 1477 369 0 0 0 chr13 117021921 117021962 -3262350 + (TAAA)n Simple_repeat Simple_repeat 2 42 0 3 1477 189 0 0 0 chr13 117022060 117022081 -3262231 + (TG)n Simple_repeat Simple_repeat 2 22 0 3 1477 530 338 7 0 chr13 117022101 117022246 -3262066 - B4A SINE B4 0 292 147 3 1477 7298 142 47 28 chr13 117022246 117023331 -3260981 - Lx4B LINE L1 -597 6461 5350 3 1477 1364 90 0 0 chr13 117023331 117023520 -3260792 - L1_Mus2 LINE L1 0 6566 6378 3 1477 7298 136 37 43 chr13 117023520 117024455 -3259857 - Lx4B LINE L1 -528 5349 4439 3 1477 3107 59 21 5 chr13 117024449 117024465 -3259847 - L1Md_F2 LINE L1 -562 6020 6004 3 1477 2002 130 31 3 chr13 117024465 117024788 -3259524 - L1_Mus1 LINE L1 0 6567 6236 3 1477 11148 72 10 1 chr13 117024788 117026447 -3257865 - L1Md_F2 LINE L1 -579 6003 4329 3 1477 24604 30 5 0 chr13 117026483 117030234 -3254078 - L1Md_T LINE L1 -2 6580 2803 3 1477 5676 100 9 3 chr13 117030211 117031091 -3253221 - L1Md_F2 LINE L1 -1529 4354 3470 3 1477 2406 124 47 14 chr13 117031062 117031488 -3252824 - L1_Mur2 LINE L1 -1418 4459 4020 3 1477 209 250 13 0 chr13 117031928 117032004 -3252308 + (TA)n Simple_repeat Simple_repeat 1 77 0 3 1477 27 0 0 0 chr13 117032013 117032040 -3252272 + AT_rich Low_complexity Low_complexity 1 27 0 4 1477 625 344 0 25 chr13 117032136 117032294 -3252018 + RSINE1 SINE B4 7 160 -5 4 1477 267 327 211 23 chr13 117032639 117032943 -3251369 - MLT1L LTR MaLR 0 610 250 4 1477 24 0 0 0 chr13 117033514 117033538 -3250774 + AT_rich Low_complexity Low_complexity 1 24 0 4 1477 374 371 4 94 chr13 117034415 117034659 -3249653 - B4A SINE B4 -16 276 55 4 1477 802 179 12 0 chr13 117034837 117035005 -3249307 + CT-rich Low_complexity Low_complexity 2 171 0 4 1477 226 300 57 16 chr13 117035463 117035585 -3248727 + L1M5 LINE L1 5497 5623 -556 4 1477 2163 45 65 10 chr13 117036752 117037042 -3247270 + L1Md_F3 LINE L1 6270 6575 -9 4 1477 369 117 17 0 chr13 117037245 117037305 -3247007 - Lx2A1 LINE L1 -762 6246 6186 4 1477 3221 109 35 53 chr13 117037308 117037853 -3246459 + Lx2A1 LINE L1 6465 6999 -9 4 1477 1225 104 33 6 chr13 117038806 117038989 -3245323 + B2_Mm2 SINE B2 2 189 -6 5 1477 288 0 0 0 chr13 117039192 117039224 -3245088 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1477 3173 63 2 0 chr13 117039341 117039740 -3244572 - MTB LTR MaLR 0 400 1 5 1477 230 275 50 0 chr13 117040717 117040797 -3243515 + GA-rich Low_complexity Low_complexity 4 87 0 5 1477 1195 50 0 0 chr13 117041271 117041412 -3242900 - B1_Mus1 SINE Alu -7 141 1 5 1477 399 21 0 0 chr13 117041870 117041918 -3242394 + (TAA)n Simple_repeat Simple_repeat 1 48 0 5 1477 21 0 0 0 chr13 117042416 117042437 -3241875 + AT_rich Low_complexity Low_complexity 1 21 0 5 1477 3171 61 12 21 chr13 117043233 117043653 -3240659 + L1_Mus1 LINE L1 6152 6567 0 5 1477 446 237 134 8 chr13 117043666 117043785 -3240527 + B3A SINE B2 1 134 -64 5 1477 1571 129 5 212 chr13 117043800 117044233 -3240079 + RMER6A LTR ERVK 57 399 -357 5 1477 677 108 0 18 chr13 117044233 117044346 -3239966 + Lx2 LINE L1 6887 6997 0 6 1477 331 21 42 0 chr13 117044348 117044396 -3239916 + (TA)n Simple_repeat Simple_repeat 2 51 0 6 1477 351 0 0 0 chr13 117044638 117044677 -3239635 + (TTTG)n Simple_repeat Simple_repeat 3 41 0 6 1477 338 306 10 0 chr13 117044879 117044977 -3239335 + PB1D10 SINE Alu 8 106 -11 6 1477 295 310 105 9 chr13 117045539 117045653 -3238659 + PB1 SINE Alu 1 125 -2 6 1477 363 70 0 40 chr13 117045753 117045828 -3238484 + (CAAAA)n Simple_repeat Simple_repeat 5 76 0 6 1477 534 320 89 53 chr13 117046341 117046622 -3237690 + MLT1I LTR MaLR 118 408 -3 6 1477 328 218 159 56 chr13 117047041 117047167 -3237145 + B4 SINE B4 34 172 -120 6 184 1020 45 0 0 chr13 117047167 117047301 -3237011 + (TTGG)n Simple_repeat Simple_repeat 2 135 0 6 1478 233 296 34 0 chr13 117047373 117047388 -3236924 + ID SINE ID 70 84 -208 6 1478 376 295 27 0 chr13 117047388 117047500 -3236812 + PB1D7 SINE Alu 1 115 -5 7 1478 3047 56 8 10 chr13 117047943 117048340 -3235972 + MTA_Mm LTR MaLR 1 396 0 7 1478 693 261 71 0 chr13 117048499 117048683 -3235629 + B3 SINE B2 1 197 -19 7 1478 29 0 0 0 chr13 117048800 117048829 -3235483 + AT_rich Low_complexity Low_complexity 1 29 0 7 1478 456 51 0 0 chr13 117049005 117049064 -3235248 + (TG)n Simple_repeat Simple_repeat 2 60 0 7 1478 861 173 0 14 chr13 117049124 117049265 -3235047 + B1_Mur4 SINE Alu 1 139 -11 7 1478 463 299 148 40 chr13 117049436 117049638 -3234674 + B4A SINE B4 45 268 -24 7 1478 209 176 0 0 chr13 117049769 117049803 -3234509 + (CACG)n Simple_repeat Simple_repeat 2 35 0 7 1478 349 340 58 19 chr13 117051764 117051920 -3232392 + RSINE1 SINE B4 4 165 0 7 1478 739 279 11 0 chr13 117052439 117052622 -3231690 + B3 SINE B2 4 188 -28 7 1478 4111 47 0 0 chr13 117053058 117053591 -3230721 + L1_Mm LINE L1 4630 5162 -721 8 1478 1346 61 116 0 chr13 117053591 117053789 -3230523 + L1Md_F2 LINE L1 6359 6579 -3 8 1478 3603 177 0 197 chr13 117053789 117054446 -3229866 + L1_Mur2 LINE L1 5157 5580 -297 8 1478 7764 52 6 4 chr13 117054447 117055428 -3228884 + L1Md_F2 LINE L1 5588 6570 -12 8 1478 530 332 99 48 chr13 117055639 117055952 -3228360 - MLT1A1 LTR MaLR -2 406 78 8 1478 410 295 42 33 chr13 117055955 117056169 -3228143 + L1MA5A LINE L1 5721 5936 -361 8 1478 201 326 95 56 chr13 117056259 117056490 -3227822 - MIRb SINE MIR -15 253 14 8 1478 305 283 128 21 chr13 117057132 117057226 -3227086 - PB1D10 SINE Alu -13 104 1 8 1478 7713 221 60 15 chr13 117057871 117059633 -3224679 - Lx6 LINE L1 -4 7456 5615 8 1478 948 254 29 0 chr13 117059678 117059887 -3224425 - B3 SINE B2 0 216 2 8 1478 3248 92 0 0 chr13 117060021 117060421 -3223891 + MTB LTR MaLR 1 400 0 9 1478 271 173 0 19 chr13 117060553 117060606 -3223706 - ORR1C2 LTR MaLR -332 52 1 9 1478 232 343 46 46 chr13 117061333 117061550 -3222762 + L1MC5 LINE L1 7058 7274 -687 9 1478 228 100 0 0 chr13 117061931 117061971 -3222341 + (TTTTTG)n Simple_repeat Simple_repeat 1 40 0 9 1478 1272 54 0 0 chr13 117061973 117062120 -3222192 - B1_Mus2 SINE Alu 0 147 1 9 1478 23 54 0 0 chr13 117062289 117062326 -3221986 + AT_rich Low_complexity Low_complexity 1 37 0 9 1478 360 0 0 0 chr13 117062378 117062418 -3221894 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 9 1478 817 130 31 0 chr13 117062419 117062581 -3221731 + GA-rich Low_complexity Low_complexity 4 170 0 9 1478 1319 22 0 37 chr13 117062585 117062772 -3221540 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 9 1478 789 95 0 0 chr13 117062783 117062899 -3221413 + (GA)n Simple_repeat Simple_repeat 2 117 0 9 1478 21 0 0 0 chr13 117063538 117063559 -3220753 + AT_rich Low_complexity Low_complexity 1 21 0 1 1478 810 195 40 70 chr13 117063647 117063846 -3220466 - B2_Mm2 SINE B2 0 195 3 1 1478 1054 93 6 6 chr13 117063865 117064027 -3220285 + (TTC)n Simple_repeat Simple_repeat 1 162 0 1 1478 317 106 0 0 chr13 117064027 117064074 -3220238 - L1_Mur1 LINE L1 -1097 4789 4743 1 1478 1645 129 28 0 chr13 117064075 117064330 -3219982 - Lx LINE L1 -5 6649 6388 1 1478 1764 172 38 0 chr13 117064330 117064643 -3219669 - L1_Mur2 LINE L1 -537 5340 5016 1 1478 4076 147 11 1 chr13 117064641 117065310 -3219002 - L1_Mur2 LINE L1 -1183 4694 4020 1 1478 5305 146 11 2 chr13 117065309 117066178 -3218134 + L1_Mur2 LINE L1 3141 4017 -1860 1 1478 257 342 61 61 chr13 117066192 117066357 -3217955 + ORR1E LTR MaLR 19 183 -176 1 1478 840 170 57 0 chr13 117068332 117068473 -3215839 + B1_Mur4 SINE Alu 1 149 -1 1 1478 794 179 0 54 chr13 117070493 117070641 -3213671 + B1_Mur2 SINE Alu 10 149 0 1 1478 203 245 0 0 chr13 117070648 117070701 -3213611 + GA-rich Low_complexity Low_complexity 2 54 0 1 1478 180 280 147 0 chr13 117071651 117071726 -3212586 + MIR3 SINE MIR 71 156 -52 1 1478 408 286 17 51 chr13 117071944 117072062 -3212250 - PB1D10 SINE Alu -3 114 1 1 1478 22 0 0 0 chr13 117072672 117072694 -3211618 + AT_rich Low_complexity Low_complexity 1 22 0 1 1478 25 24 0 23 chr13 117073106 117073129 -3211183 + AT_rich Low_complexity Low_complexity 1 23 0 1 1478 5178 170 35 9 chr13 117073129 117074019 -3210293 + Lx4B LINE L1 6129 7041 -17 1 1478 25 24 0 23 chr13 117074019 117074038 -3210274 + AT_rich Low_complexity Low_complexity 1 19 0 1 1478 811 194 52 0 chr13 117074062 117074196 -3210116 + B1_Mur3 SINE Alu 1 141 -8 1 1478 284 308 22 0 chr13 117074197 117074288 -3210024 + (TATATG)n Simple_repeat Simple_repeat 6 98 0 1 1478 201 133 0 0 chr13 117074466 117074496 -3209816 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 1 1478 249 345 105 33 chr13 117075345 117075555 -3208757 + L2 LINE L2 1931 2155 -1264 1 1478 795 21 0 0 chr13 117075892 117075985 -3208327 + (TC)n Simple_repeat Simple_repeat 2 94 0 1 1478 417 325 200 33 chr13 117076654 117076899 -3207413 + B4A SINE B4 1 286 -6 1 1478 318 132 0 0 chr13 117076940 117076993 -3207319 + (CA)n Simple_repeat Simple_repeat 2 54 0 1 1478 860 85 0 0 chr13 117077072 117077190 -3207122 + B1_Mus1 SINE Alu 31 148 0 1 1478 782 87 40 2 chr13 117077239 117077388 -3206924 - B2_Mm2 SINE B2 -34 161 28 1 1478 1051 301 49 26 chr13 117077474 117077819 -3206493 - ORR1E LTR MaLR -6 353 1 1 1478 911 274 87 4 chr13 117077831 117078106 -3206206 + MTEa LTR MaLR 82 379 0 1 1478 367 239 36 24 chr13 117078508 117078675 -3205637 + (TA)n Simple_repeat Simple_repeat 1 169 0 1 1478 1381 72 66 11 chr13 117078713 117078896 -3205416 + B2_Mm2 SINE B2 1 193 -2 1 1478 612 310 13 127 chr13 117078912 117079141 -3205171 + B3 SINE B2 1 203 -13 1 1478 336 161 0 0 chr13 117079141 117079203 -3205109 + (TA)n Simple_repeat Simple_repeat 1 62 0 1 1478 21 0 0 0 chr13 117079207 117079228 -3205084 + AT_rich Low_complexity Low_complexity 1 21 0 1 1478 362 261 108 36 chr13 117079441 117079580 -3204732 - B1F2 SINE Alu 0 149 1 1 1478 230 303 182 14 chr13 117079581 117079795 -3204517 + Charlie1b DNA MER1_type 66 315 -208 1 1478 592 53 0 0 chr13 117079799 117079874 -3204438 + BC1_Mm scRNA scRNA 13 87 -65 1 1478 3115 53 48 3 chr13 117080138 117080517 -3203795 + MTA_Mm LTR MaLR 1 396 0 1 1478 468 0 0 0 chr13 117081724 117081776 -3202536 + (CA)n Simple_repeat Simple_repeat 1 52 0 1 1478 279 133 0 0 chr13 117082306 117082351 -3201961 + Lx4A LINE L1 7010 7054 -4 1 1478 25 0 0 0 chr13 117082352 117082377 -3201935 + AT_rich Low_complexity Low_complexity 1 25 0 1 1478 369 128 39 31 chr13 117083166 117083295 -3201017 + CT-rich Low_complexity Low_complexity 1 130 0 1 1478 195 42 0 0 chr13 117085331 117085355 -3198957 + (TTG)n Simple_repeat Simple_repeat 2 25 0 1 1478 405 0 0 0 chr13 117085947 117085992 -3198320 + (CA)n Simple_repeat Simple_repeat 1 45 0 1 1478 188 271 0 0 chr13 117087943 117087991 -3196321 - L3 LINE CR1 -2266 2223 2176 1 1478 23 33 0 0 chr13 117088703 117088733 -3195579 + AT_rich Low_complexity Low_complexity 1 30 0 1 1478 202 214 0 0 chr13 117088987 117089029 -3195283 + A-rich Low_complexity Low_complexity 2 43 0 1 1478 234 0 0 0 chr13 117089645 117089671 -3194641 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1478 552 30 0 0 chr13 117090609 117090675 -3193637 + (CA)n Simple_repeat Simple_repeat 2 67 0 1 1478 348 24 0 0 chr13 117090687 117090728 -3193584 + (GA)n Simple_repeat Simple_repeat 1 41 0 1 1478 909 52 0 0 chr13 117094880 117094995 -3189317 + (GA)n Simple_repeat Simple_repeat 1 115 0 1 1478 250 281 16 0 chr13 117095850 117095914 -3188398 + C-rich Low_complexity Low_complexity 5 69 0 1 1478 225 94 0 0 chr13 117096167 117096199 -3188113 + (CCA)n Simple_repeat Simple_repeat 1 32 0 1 1478 360 0 0 0 chr13 117096790 117096830 -3187482 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1478 219 175 0 24 chr13 117098770 117098811 -3185501 + T-rich Low_complexity Low_complexity 4 43 0 1 1478 513 0 0 0 chr13 117099389 117099446 -3184866 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1478 269 51 0 25 chr13 117100522 117100562 -3183750 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 1 1478 504 0 0 0 chr13 117101206 117101262 -3183050 + (GA)n Simple_repeat Simple_repeat 2 57 0 1 1478 223 49 24 24 chr13 117101292 117101334 -3182978 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1 1478 29 0 0 0 chr13 117101571 117101600 -3182712 + AT_rich Low_complexity Low_complexity 1 29 0 1 1478 195 129 0 0 chr13 117102990 117103021 -3181291 + (GAAAA)n Simple_repeat Simple_repeat 4 34 0 1 1478 591 53 0 0 chr13 117103641 117103716 -3180596 + (GA)n Simple_repeat Simple_repeat 2 76 0 1 1478 21 0 0 0 chr13 117105001 117105022 -3179290 + AT_rich Low_complexity Low_complexity 1 21 0 1 1478 2526 57 3 3 chr13 117105430 117105730 -3178582 + L1_Mus1 LINE L1 6266 6565 -2 1 1478 782 139 6 143 chr13 117107426 117107594 -3176718 + B1_Mus1 SINE Alu 3 147 -1 1 1478 315 0 0 0 chr13 117108774 117108809 -3175503 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 1 1478 290 275 96 32 chr13 117110154 117110248 -3174064 + RSINE1 SINE B4 3 102 -63 1 1478 801 135 34 47 chr13 117110755 117110903 -3173409 - B1_Mus2 SINE Alu 0 147 2 1 1478 627 228 16 37 chr13 117111432 117111623 -3172689 - Lx9 LINE L1 0 7644 7458 1 1478 336 200 0 0 chr13 117111623 117111693 -3172619 + (TA)n Simple_repeat Simple_repeat 1 70 0 1 1478 256 120 109 0 chr13 117111693 117111785 -3172527 - Lx9 LINE L1 -127 7517 7416 1 1478 551 269 66 15 chr13 117111795 117111931 -3172381 - B1_Mur3 SINE Alu -1 148 6 1 1478 227 317 25 129 chr13 117111833 117111996 -3172316 - MT2B LTR ERVL -345 256 111 1 1478 399 83 0 0 chr13 117112247 117112307 -3172005 + (TA)n Simple_repeat Simple_repeat 1 60 0 1 1478 1269 325 69 35 chr13 117112374 117112967 -3171345 - MER90a LTR ERV1 0 614 2 1 1478 200 288 50 25 chr13 117113153 117113274 -3171038 + (CATATA)n Simple_repeat Simple_repeat 5 128 0 1 1478 252 0 0 0 chr13 117113962 117113990 -3170322 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1 1478 915 301 77 57 chr13 117114862 117115228 -3169084 + MTEb LTR MaLR 5 377 -2 1 1478 246 284 39 101 chr13 117115229 117115358 -3168954 + MTEb-int LTR MaLR 2 122 -1458 1 1478 535 228 96 86 chr13 117115358 117115545 -3168767 + ORR1C2 LTR MaLR 1 189 -185 1 1478 811 192 9 3 chr13 117115545 117115880 -3168432 + CT-rich Low_complexity Low_complexity 1 337 0 1 1478 635 279 33 29 chr13 117115894 117116104 -3168208 + ORR1C2 LTR MaLR 174 384 0 1 1478 2506 170 27 7 chr13 117116107 117116557 -3167755 + Lx3C LINE L1 6498 6956 -20 1 1478 378 0 0 0 chr13 117116563 117116605 -3167707 + (TAA)n Simple_repeat Simple_repeat 1 42 0 1 1478 547 212 20 0 chr13 117116611 117116730 -3167582 + B1_Mur1 SINE Alu 24 140 -9 1 1478 427 327 98 17 chr13 117116739 117116913 -3167399 + MTEb-int LTR MaLR 152 339 -1241 1 1478 243 61 0 0 chr13 117116913 117116946 -3167366 + (CAAAA)n Simple_repeat Simple_repeat 1 33 0 1 1478 1786 288 110 25 chr13 117116969 117117640 -3166672 + MTEb-int LTR MaLR 850 1577 -3 1 1478 931 275 89 39 chr13 117117643 117118002 -3166310 + MTEb LTR MaLR 1 377 -2 1 1478 580 250 29 47 chr13 117118008 117118180 -3166132 + MER2 DNA MER2_type 153 321 -24 1 1478 268 242 0 157 chr13 117118379 117118487 -3165825 + MT2B LTR ERVL 152 242 -359 1 1478 396 250 0 61 chr13 117118395 117118493 -3165819 + B1_Mur3 SINE Alu 1 92 -57 1 1478 276 269 15 0 chr13 117118499 117118566 -3165746 + RMER15 LTR ERVL 494 561 -14 1 1478 233 75 25 0 chr13 117118697 117118737 -3165575 + (TTATA)n Simple_repeat Simple_repeat 1 41 0 1 1478 1478 237 68 15 chr13 117118820 117119218 -3165094 + MTD LTR MaLR 1 419 0 1 1478 1229 7 14 0 chr13 117120213 117120358 -3163954 + (TCTA)n Simple_repeat Simple_repeat 3 149 0 1 1478 961 132 70 27 chr13 117120495 117120553 -3163759 - B2_Mm2 SINE B2 0 195 134 1 1478 480 18 0 0 chr13 117120553 117120610 -3163702 + (CA)n Simple_repeat Simple_repeat 1 57 0 1 1478 961 132 70 27 chr13 117120610 117120738 -3163574 - B2_Mm2 SINE B2 -62 133 3 1 1478 265 258 0 15 chr13 117120807 117120874 -3163438 - RSINE1 SINE B4 -41 124 59 1 1478 685 83 9 18 chr13 117121777 117121888 -3162424 + (TTCTC)n Simple_repeat Simple_repeat 1 110 0 1 1478 189 342 0 0 chr13 117121890 117122001 -3162311 + T-rich Low_complexity Low_complexity 1 111 0 1 1478 634 146 24 0 chr13 117122058 117122181 -3162131 + T-rich Low_complexity Low_complexity 5 130 0 1 1478 278 280 13 26 chr13 117122182 117122259 -3162053 - ID4_ SINE ID -3 80 5 1 1478 225 0 0 0 chr13 117123333 117123358 -3160954 + (CATTG)n Simple_repeat Simple_repeat 1 25 0 1 1478 765 273 60 13 chr13 117123407 117123641 -3160671 - MLT1D LTR MaLR -256 249 5 1 1478 1096 102 6 11 chr13 117123837 117124016 -3160296 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1 1478 406 280 37 18 chr13 117124041 117124150 -3160162 - PB1D10 SINE Alu 0 117 7 1 1478 30 0 0 0 chr13 117124791 117124821 -3159491 + AT_rich Low_complexity Low_complexity 1 30 0 1 1478 342 182 0 0 chr13 117124821 117124887 -3159425 - Lx3B LINE L1 -6 6967 6902 2 1478 294 232 239 9 chr13 117125078 117125191 -3159121 + B1F1 SINE Alu 9 147 -2 2 1478 560 271 7 15 chr13 117125213 117125225 -3159087 - B3A SINE B2 -62 136 126 2 1478 696 83 0 0 chr13 117125225 117125321 -3158991 + (GGA)n Simple_repeat Simple_repeat 3 98 0 2 1478 560 271 7 15 chr13 117125321 117125443 -3158869 - B3A SINE B2 -73 125 3 2 1478 24 32 0 0 chr13 117125639 117125670 -3158642 + AT_rich Low_complexity Low_complexity 1 31 0 2 1478 357 322 84 32 chr13 117126324 117126338 -3157974 - RSINE1 SINE B4 -1 164 151 2 1478 405 39 0 0 chr13 117126338 117126389 -3157923 + (TC)n Simple_repeat Simple_repeat 2 52 0 2 1478 207 0 0 0 chr13 117126389 117126411 -3157901 + (TG)n Simple_repeat Simple_repeat 2 24 0 2 1478 357 322 84 32 chr13 117126411 117126549 -3157763 - RSINE1 SINE B4 -15 150 4 2 1478 398 322 31 47 chr13 117126703 117126830 -3157482 + PB1D10 SINE Alu 1 125 -24 2 1478 226 314 0 0 chr13 117129313 117129364 -3154948 - B1_Mur3 SINE Alu -48 101 51 2 1478 4579 69 2 0 chr13 117129567 117130159 -3154153 + L1_Mm LINE L1 4975 5567 -316 2 1478 4953 42 28 3 chr13 117130159 117130775 -3153537 + L1Md_F2 LINE L1 5940 6570 -12 2 1478 21 0 0 0 chr13 117130815 117130836 -3153476 + AT_rich Low_complexity Low_complexity 1 21 0 2 1478 427 294 41 27 chr13 117130841 117130988 -3153324 + RSINE1 SINE B4 3 151 -14 2 1478 383 152 15 15 chr13 117131028 117131095 -3153217 + HAL1-3A_ME LINE L1 1975 2041 -817 2 1478 210 167 0 0 chr13 117131187 117131223 -3153089 + A-rich Low_complexity Low_complexity 1 36 0 2 1478 23 0 0 0 chr13 117131847 117131870 -3152442 + AT_rich Low_complexity Low_complexity 1 23 0 2 1478 981 130 14 0 chr13 117132342 117132488 -3151824 + B1_Mus1 SINE Alu 1 148 0 2 1478 2267 164 189 58 chr13 117132521 117133128 -3151184 + RMER6C LTR ERVK 1 687 -3 2 1478 1677 317 142 14 chr13 117133810 117134087 -3150225 - Lx8 LINE L1 -372 7101 6800 2 1478 577 0 27 0 chr13 117134087 117134160 -3150152 + (TA)n Simple_repeat Simple_repeat 1 75 0 2 1478 1677 317 142 14 chr13 117134160 117134657 -3149655 - Lx8 LINE L1 -674 6799 6229 2 1478 439 304 41 15 chr13 117134952 117135149 -3149163 - Lx9 LINE L1 -1673 5971 5770 2 1478 1731 140 0 4 chr13 117135159 117135425 -3148887 - ORR1A2 LTR MaLR 0 327 63 2 1478 286 266 114 0 chr13 117135422 117135501 -3148811 - B4A SINE B4 -204 88 1 2 1478 1300 162 12 39 chr13 117135662 117135919 -3148393 - Lx2 LINE L1 -11 6986 6737 2 1478 1327 104 33 0 chr13 117135919 117136131 -3148181 - Lx2 LINE L1 -908 6089 5871 2 1478 374 261 114 65 chr13 117136558 117136759 -3147553 - Lx8 LINE L1 0 7473 7263 2 1478 610 366 0 8 chr13 117136758 117137006 -3147306 + Lx8 LINE L1 6298 6543 -930 2 1478 705 56 0 0 chr13 117137377 117137467 -3146845 + (GA)n Simple_repeat Simple_repeat 1 90 0 2 1478 306 0 0 0 chr13 117138254 117138288 -3146024 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2 1478 1912 219 9 21 chr13 117140302 117140726 -3143586 - MTD LTR MaLR 0 419 1 2 1478 690 229 164 22 chr13 117141874 117142057 -3142255 - B3 SINE B2 -6 210 2 2 1478 1509 249 72 16 chr13 117142397 117142797 -3141515 - MTD LTR MaLR -12 407 1 2 1478 944 57 0 16 chr13 117142940 117143064 -3141248 + L1_Mus1 LINE L1 6256 6377 -190 2 1478 569 352 72 30 chr13 117143650 117144080 -3140232 + Lx9 LINE L1 7063 7510 -134 2 1478 616 214 18 0 chr13 117144278 117144390 -3139922 - B1_Mur4 SINE Alu -34 116 3 2 1478 211 354 13 0 chr13 117144689 117144768 -3139544 + ID4 SINE ID 4 83 0 2 1478 233 170 64 0 chr13 117144849 117144896 -3139416 + (TATATG)n Simple_repeat Simple_repeat 3 52 0 2 1478 1156 62 0 0 chr13 117145652 117145796 -3138516 + B1_Mm SINE Alu 2 145 -2 2 1478 319 287 54 27 chr13 117146400 117146511 -3137801 + RMER15 LTR ERVL 14 127 -448 2 1478 701 290 64 27 chr13 117146553 117146851 -3137461 + RMER15 LTR ERVL 267 575 0 2 1478 405 0 0 0 chr13 117147214 117147259 -3137053 + (CA)n Simple_repeat Simple_repeat 2 46 0 2 1478 189 0 0 0 chr13 117147259 117147279 -3137033 + (GA)n Simple_repeat Simple_repeat 2 22 0 2 1478 311 421 70 41 chr13 117147748 117148162 -3136150 - LTR16A LTR ERVL -9 442 17 2 1478 22 0 0 0 chr13 117148829 117148851 -3135461 + AT_rich Low_complexity Low_complexity 1 22 0 2 1478 23 0 0 0 chr13 117149050 117149073 -3135239 + AT_rich Low_complexity Low_complexity 1 23 0 2 1478 253 89 35 35 chr13 117149628 117149686 -3134626 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 2 1478 29 28 0 0 chr13 117150745 117150781 -3133531 + AT_rich Low_complexity Low_complexity 1 36 0 2 1478 4987 110 233 30 chr13 117152295 117152898 -3131414 + L1Md_F3 LINE L1 356 1097 -5560 2 1478 974 118 21 0 chr13 117152898 117153042 -3131270 + B1_Mus1 SINE Alu 1 147 -1 2 1478 21998 100 7 45 chr13 117153042 117158004 -3126308 + L1Md_F3 LINE L1 1098 5589 -297 2 1478 8237 35 5 2 chr13 117158004 117158993 -3125319 + L1Md_F3 LINE L1 5587 6578 -6 2 1478 1170 76 0 0 chr13 117158993 117159151 -3125161 + (GGAA)n Simple_repeat Simple_repeat 3 160 0 2 1478 13782 162 16 8 chr13 117159151 117162016 -3122296 + Lx LINE L1 3270 6161 -493 2 1478 7849 67 2 1 chr13 117162014 117163303 -3121009 + L1_Mus1 LINE L1 5276 6567 0 2 1478 2665 142 32 32 chr13 117163414 117163917 -3120395 + Lx LINE L1 6151 6653 -1 2 1478 2650 241 69 3 chr13 117163935 117164573 -3119739 - Lx6 LINE L1 -18 7442 6763 2 1478 974 132 0 12 chr13 117164577 117164647 -3119665 + (TCC)n Simple_repeat Simple_repeat 1 70 0 2 1478 1099 84 0 11 chr13 117164647 117164827 -3119485 + (TTC)n Simple_repeat Simple_repeat 2 179 0 2 1478 974 132 0 12 chr13 117164827 117164925 -3119387 + (TCC)n Simple_repeat Simple_repeat 3 99 0 2 1478 4242 234 61 31 chr13 117164950 117165524 -3118788 - Lx6 LINE L1 -709 6751 6169 2 1478 5784 27 0 0 chr13 117165524 117166196 -3118116 - L1Md_T LINE L1 0 6582 5911 2 1478 4242 234 61 31 chr13 117166196 117166344 -3117968 - Lx6 LINE L1 -1292 6168 6019 2 1478 1004 112 0 0 chr13 117166344 117166478 -3117834 - B1_Mus1 SINE Alu -13 135 2 2 1478 4242 234 61 31 chr13 117166478 117166885 -3117427 - Lx6 LINE L1 -1442 6018 5587 2 1478 4219 177 21 40 chr13 117166906 117167030 -3117282 - L1_Mur3 LINE L1 -3692 2188 2072 2 1478 297 0 0 0 chr13 117167030 117167063 -3117249 + (TGG)n Simple_repeat Simple_repeat 3 35 0 2 1478 4219 199 70 35 chr13 117167063 117168530 -3115782 - L1_Mur3 LINE L1 -3809 2071 531 2 1478 2906 64 66 0 chr13 117169086 117169479 -3114833 - L1Md_F2 LINE L1 -11 6571 6153 2 1478 287 196 0 0 chr13 117170489 117170540 -3113772 + Lx9 LINE L1 6437 6487 -1157 2 1478 624 12 35 0 chr13 117171319 117171404 -3112908 + (TA)n Simple_repeat Simple_repeat 1 88 0 2 1478 376 315 40 20 chr13 117171594 117171746 -3112566 + L1MCa LINE L1 8 162 -6346 2 1478 540 0 0 0 chr13 117171753 117171813 -3112499 + (GA)n Simple_repeat Simple_repeat 2 61 0 2 1478 502 316 23 126 chr13 117171813 117172027 -3112285 - MTEb LTR MaLR -187 192 1 2 1478 2677 315 46 44 chr13 117172047 117172856 -3111456 - MTE-int LTR MaLR -35 1545 735 2 1478 207 0 0 0 chr13 117172856 117172879 -3111433 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1478 2677 315 46 44 chr13 117172879 117173032 -3111280 - MTE-int LTR MaLR -846 734 581 2 1478 230 284 0 40 chr13 117173034 117173133 -3111179 - Lx2B LINE L1 0 7000 6906 2 1478 666 316 73 31 chr13 117173134 117173421 -3110891 - MTE-int LTR MaLR -929 651 353 2 1478 569 306 105 5 chr13 117173398 117173608 -3110704 - MTEa LTR MaLR -148 231 1 2 1478 366 302 73 58 chr13 117173608 117173882 -3110430 + L1MC1 LINE L1 6049 6326 -7 2 1478 721 349 74 3 chr13 117174239 117174538 -3109774 + MER45B DNA Tip100 8 327 -713 2 1478 749 293 145 11 chr13 117174655 117175021 -3109291 + MER45B DNA Tip100 626 1040 0 2 1478 650 47 12 0 chr13 117175192 117175278 -3109034 + (GA)n Simple_repeat Simple_repeat 2 88 0 2 1478 709 303 79 18 chr13 117175317 117175596 -3108716 - MLT2D LTR ERVL -107 307 12 2 1478 1442 78 16 0 chr13 117176892 117177084 -3107228 - B2_Mm2 SINE B2 0 195 1 2 1478 261 57 0 0 chr13 117177198 117177233 -3107079 + (TATG)n Simple_repeat Simple_repeat 2 36 0 2 1478 300 119 0 0 chr13 117177233 117177292 -3107020 + (TTAG)n Simple_repeat Simple_repeat 2 60 0 2 1478 476 324 11 91 chr13 117177545 117177732 -3106580 + MTEa LTR MaLR 20 191 -188 2 1478 26 30 0 0 chr13 117177832 117177865 -3106447 + AT_rich Low_complexity Low_complexity 1 33 0 2 1479 955 351 22 25 chr13 117180382 117180782 -3103530 - MLT1C LTR MaLR -9 458 61 2 1479 2917 59 20 18 chr13 117180782 117181180 -3103132 - MTB LTR MaLR 0 400 2 2 1479 955 351 22 25 chr13 117181180 117181223 -3103089 - MLT1C LTR MaLR -407 60 16 2 1479 189 0 0 0 chr13 117181516 117181537 -3102775 + (T)n Simple_repeat Simple_repeat 1 21 0 2 1479 278 312 40 30 chr13 117182840 117182939 -3101373 - LTR16A LTR ERVL -177 274 175 2 1479 589 188 119 67 chr13 117183017 117183130 -3101182 + Lx9 LINE L1 7345 7456 -188 2 1479 378 0 0 0 chr13 117183130 117183172 -3101140 + (TA)n Simple_repeat Simple_repeat 2 43 0 2 1479 589 188 119 67 chr13 117183172 117183343 -3100969 + Lx9 LINE L1 7457 7644 0 2 1479 394 241 13 0 chr13 117184901 117184980 -3099332 - ID_B1 SINE B4 -42 182 103 2 1479 244 326 67 0 chr13 117184906 117184995 -3099317 - B1F2 SINE Alu -50 99 5 2 1479 446 146 12 0 chr13 117185672 117185754 -3098558 + CT-rich Low_complexity Low_complexity 2 84 0 2 1479 2139 181 42 7 chr13 117187478 117187885 -3096427 - MTC LTR MaLR 0 421 1 2 1479 301 102 17 17 chr13 117187896 117187956 -3096356 + (TG)n Simple_repeat Simple_repeat 1 60 0 2 1479 315 0 0 0 chr13 117189782 117189817 -3094495 + (CA)n Simple_repeat Simple_repeat 2 36 0 2 1479 267 290 77 70 chr13 117190020 117190176 -3094136 + MLT1A0 LTR MaLR 8 164 -201 2 1479 584 299 69 19 chr13 117190171 117190331 -3093981 + B3A SINE B2 15 182 -16 2 1479 431 326 47 0 chr13 117190355 117190484 -3093828 + MLT1A0 LTR MaLR 231 365 0 2 1479 681 240 0 14 chr13 117190499 117190647 -3093665 - RLTR11A LTR ERVK -17 511 366 2 1479 793 56 16 31 chr13 117190649 117190778 -3093534 - L1Md_F3 LINE L1 0 6584 6458 2 1479 1845 45 0 0 chr13 117190778 117190999 -3093313 + L1Md_F3 LINE L1 6048 6268 -316 2 1479 1382 221 33 91 chr13 117190999 117191393 -3092919 - RLTR11A LTR ERVK -148 380 10 2 1479 272 246 70 78 chr13 117191402 117191530 -3092782 + MLT-int LTR MaLR 33 159 -1576 2 1479 559 333 10 31 chr13 117192194 117192485 -3091827 + B4A SINE B4 2 286 -6 2 1479 180 191 0 0 chr13 117192745 117192758 -3091554 + (TA)n Simple_repeat Simple_repeat 1 13 0 2 1479 351 0 0 0 chr13 117192758 117192797 -3091515 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1479 180 191 0 0 chr13 117192797 117192825 -3091487 + (TA)n Simple_repeat Simple_repeat 1 28 0 2 1479 490 370 14 39 chr13 117193685 117193893 -3090419 + ID_B1 SINE B4 2 204 -20 2 1479 375 23 0 0 chr13 117193898 117193942 -3090370 + (CTAA)n Simple_repeat Simple_repeat 1 44 0 3 1479 908 273 55 12 chr13 117193942 117194198 -3090114 + MER2 DNA MER2_type 79 345 0 3 1479 180 0 0 0 chr13 117195029 117195049 -3089263 + (TTA)n Simple_repeat Simple_repeat 1 20 0 3 1479 2138 160 43 41 chr13 117195049 117195486 -3088826 - Lx2B LINE L1 -14 6986 6549 3 1479 228 59 0 0 chr13 117196052 117196086 -3088226 + B3A SINE B2 2 35 -163 3 1479 1076 133 0 6 chr13 117196293 117196474 -3087838 + (TCTCC)n Simple_repeat Simple_repeat 1 180 0 3 1479 651 88 0 0 chr13 117196474 117196565 -3087747 + (TTTCC)n Simple_repeat Simple_repeat 5 95 0 3 1479 21 36 0 0 chr13 117196881 117196909 -3087403 + AT_rich Low_complexity Low_complexity 1 28 0 3 1479 317 303 141 21 chr13 117197563 117197755 -3086557 - RMER15 LTR ERVL -65 510 296 3 1479 216 0 0 0 chr13 117198790 117198814 -3085498 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 3 1479 782 169 7 0 chr13 117199736 117199883 -3084429 + GA-rich Low_complexity Low_complexity 2 149 0 3 1479 486 49 0 0 chr13 117199883 117199944 -3084368 + (GGGAA)n Simple_repeat Simple_repeat 1 61 0 3 1479 1526 6 11 0 chr13 117199951 117200129 -3084183 + (GGAAA)n Simple_repeat Simple_repeat 1 180 0 3 1479 882 113 0 0 chr13 117200135 117200268 -3084044 + (GGAA)n Simple_repeat Simple_repeat 3 135 0 3 1479 229 272 71 102 chr13 117200658 117200785 -3083527 + MTE2a LTR MaLR 8 130 -249 3 1479 977 273 104 30 chr13 117200785 117201121 -3083191 - ORR1D2 LTR MaLR -9 361 1 3 1479 635 284 58 27 chr13 117201121 117201307 -3083005 + MTE2a LTR MaLR 187 378 -1 3 1479 192 40 0 0 chr13 117201615 117201640 -3082672 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 3 1479 215 103 26 0 chr13 117201640 117201679 -3082633 + (TTTTC)n Simple_repeat Simple_repeat 5 44 0 3 1479 357 338 66 62 chr13 117201679 117201906 -3082406 - L1ME3 LINE L1 -263 5899 5672 3 1479 422 245 20 3 chr13 117202007 117202143 -3082169 - Lx7 LINE L1 0 7696 7576 3 1479 285 185 31 0 chr13 117202162 117202227 -3082085 - Lx7 LINE L1 -243 7453 7387 3 1479 192 125 0 0 chr13 117202236 117202268 -3082044 + (TCTCTG)n Simple_repeat Simple_repeat 2 33 0 3 1479 180 0 0 0 chr13 117205295 117205315 -3078997 + (GGGTG)n Simple_repeat Simple_repeat 2 21 0 3 1479 214 271 34 0 chr13 117205320 117205379 -3078933 - ID4 SINE ID -20 63 3 3 1479 552 68 0 0 chr13 117205451 117205524 -3078788 + (TC)n Simple_repeat Simple_repeat 1 73 0 3 1479 366 23 0 0 chr13 117205524 117205566 -3078746 + (CA)n Simple_repeat Simple_repeat 1 43 0 3 1479 611 55 22 0 chr13 117206399 117206490 -3077822 + (TAGA)n Simple_repeat Simple_repeat 2 94 0 3 1479 365 342 32 32 chr13 117206712 117206869 -3077443 + MER5A DNA MER1_type 27 183 -6 3 1479 684 36 0 0 chr13 117208940 117209023 -3075289 + (GAA)n Simple_repeat Simple_repeat 2 84 0 3 1479 464 291 132 0 chr13 117209261 117209443 -3074869 - MTD LTR MaLR -14 405 200 3 1479 465 211 129 16 chr13 117209460 117209653 -3074659 - Lx9 LINE L1 -9 7635 7421 3 1479 467 300 0 0 chr13 117209657 117209787 -3074525 - L1_Rod LINE L1 -1843 4004 3875 3 1479 5778 93 30 13 chr13 117211418 117212585 -3071727 - Lx3_Mus LINE L1 -513 6496 5307 3 1479 2982 124 0 4 chr13 117212587 117213039 -3071273 + Lx3A LINE L1 6520 6969 -12 3 1479 195 42 0 0 chr13 117213039 117213063 -3071249 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 3 1479 444 19 0 0 chr13 117213334 117213387 -3070925 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1479 2829 49 80 0 chr13 117213404 117213769 -3070543 + MTB LTR MaLR 5 398 -2 3 1479 1199 292 15 20 chr13 117213986 117214395 -3069917 + L1MA10 LINE L1 4726 5132 -1008 3 1479 408 212 7 148 chr13 117214659 117214814 -3069498 + Lx5 LINE L1 6918 7050 0 3 1479 706 324 56 50 chr13 117214869 117215350 -3068962 + L1MA10 LINE L1 5811 6294 -40 3 1479 326 282 52 95 chr13 117215406 117215731 -3068581 + Lx9 LINE L1 7329 7639 -5 3 1479 189 0 0 0 chr13 117215941 117215962 -3068350 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 3 1479 2278 86 0 0 chr13 117216324 117216637 -3067675 - L1_Mus3 LINE L1 -518 6120 5808 3 1479 462 67 0 0 chr13 117216642 117216702 -3067610 + Lx LINE L1 5733 5792 -862 3 1479 884 191 4 23 chr13 117216686 117216905 -3067407 + Lx LINE L1 6199 6364 -290 3 1479 219 306 16 16 chr13 117217285 117217348 -3066964 + PB1 SINE Alu 2 64 -63 3 1479 225 0 0 0 chr13 117218168 117218193 -3066119 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 3 1479 1803 69 69 0 chr13 117220857 117221104 -3063208 + L1_Mus2 LINE L1 6301 6564 -2 3 1479 498 334 74 27 chr13 117222179 117222545 -3061767 - L1MB4 LINE L1 -1 6179 5797 3 1479 369 0 0 0 chr13 117223212 117223253 -3061059 + (TTTAG)n Simple_repeat Simple_repeat 4 44 0 3 1479 210 37 0 0 chr13 117223426 117223453 -3060859 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 3 1479 412 242 23 70 chr13 117224563 117224692 -3059620 - L1_Rod LINE L1 -2505 3342 3220 3 1479 356 0 0 22 chr13 117224701 117224746 -3059566 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 3 1479 850 180 59 213 chr13 117224811 117225234 -3059078 + Lx9 LINE L1 7279 7636 -8 3 1479 363 290 45 22 chr13 117225341 117225475 -3058837 - B1F1 SINE Alu -4 145 9 3 1479 222 171 0 0 chr13 117226143 117226184 -3058128 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 3 1479 224 93 47 0 chr13 117226259 117226302 -3058010 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 3 1479 361 18 71 0 chr13 117226306 117226362 -3057950 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 3 1479 1104 64 0 0 chr13 117226363 117226503 -3057809 - B1_Mus1 SINE Alu -7 141 2 3 1479 427 162 0 0 chr13 117227211 117227279 -3057033 + Lx4B LINE L1 5812 5879 -1179 3 1479 1558 241 112 14 chr13 117227275 117227720 -3056592 + Lx2B LINE L1 6502 6990 -10 3 1479 791 265 132 15 chr13 117227915 117228383 -3055929 + L1MEc LINE L1 501 1023 -5377 3 1479 564 265 117 25 chr13 117228641 117228881 -3055431 - Lx8 LINE L1 -5 7468 7207 3 1479 225 291 108 23 chr13 117228961 117229221 -3055091 + L1MEc LINE L1 2061 2342 -4058 3 1479 842 29 9 0 chr13 117229335 117229440 -3054872 + (GGAA)n Simple_repeat Simple_repeat 4 109 0 3 1479 289 309 131 41 chr13 117229684 117229829 -3054483 - RLTR14 LTR ERV1 0 382 225 3 1479 1873 125 3 7 chr13 117230129 117230434 -3053878 + L1_Mus4 LINE L1 6332 6635 -1 3 1479 21 36 0 0 chr13 117230451 117230479 -3053833 + AT_rich Low_complexity Low_complexity 1 28 0 3 1479 529 335 6 6 chr13 117230490 117230652 -3053660 - RSINE1 SINE B4 0 165 4 3 1479 230 289 62 50 chr13 117230755 117230835 -3053477 - ID4_ SINE ID 0 83 3 3 1479 26 23 0 23 chr13 117230868 117230879 -3053433 + AT_rich Low_complexity Low_complexity 1 11 0 3 1479 1016 215 5 9 chr13 117230879 117231090 -3053222 + B3 SINE B2 1 210 -6 3 1479 26 23 0 23 chr13 117231090 117231122 -3053190 + AT_rich Low_complexity Low_complexity 1 32 0 3 1479 229 310 14 14 chr13 117232566 117232638 -3051674 + BC1_Mm scRNA scRNA 9 80 -72 3 1479 39 0 0 0 chr13 117235105 117235144 -3049168 + AT_rich Low_complexity Low_complexity 1 39 0 3 1479 1124 58 0 0 chr13 117235253 117235390 -3048922 + B1_Mus2 SINE Alu 1 137 -10 3 1479 243 0 0 0 chr13 117235390 117235417 -3048895 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1479 194 0 39 0 chr13 117235658 117235684 -3048628 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 3 1479 201 39 0 0 chr13 117236845 117236871 -3047441 + (GA)n Simple_repeat Simple_repeat 2 27 0 3 1479 2544 131 51 34 chr13 117237455 117237929 -3046383 - RLTR45 LTR ERVK 0 482 1 3 1479 473 121 0 0 chr13 117238168 117238234 -3046078 - Lx2 LINE L1 -472 6525 6460 3 1479 1699 148 28 10 chr13 117238236 117238558 -3045754 + Lx2 LINE L1 6647 6968 -29 3 1479 7925 139 128 13 chr13 117238560 117241348 -3042964 + L1VL4 LINE L1 363 3774 -2103 3 1479 7299 117 12 2 chr13 117241346 117242733 -3041579 + L1_Mus4 LINE L1 5217 6623 -13 3 1479 30 0 0 0 chr13 117242773 117242803 -3041509 + AT_rich Low_complexity Low_complexity 1 30 0 3 1479 595 311 52 9 chr13 117243092 117243322 -3040990 - Tigger5 DNA MER2_type -6 2400 2161 3 1479 393 406 43 47 chr13 117243306 117243541 -3040771 - Tigger5 DNA MER2_type -2171 235 2 3 1479 1042 116 17 0 chr13 117243670 117243843 -3040469 + (TTTC)n Simple_repeat Simple_repeat 3 178 0 3 1479 372 310 14 6 chr13 117243850 117243963 -3040349 - B3 SINE B2 -32 166 50 3 1479 1127 203 65 19 chr13 117244121 117244569 -3039743 - L1_Mur2 LINE L1 -4472 1405 889 3 1479 484 293 80 20 chr13 117244981 117245131 -3039181 - B3A SINE B2 -34 164 6 3 1479 637 293 54 16 chr13 117245301 117245485 -3038827 + B3A SINE B2 7 197 -1 3 1479 33 25 0 0 chr13 117246473 117246513 -3037799 + AT_rich Low_complexity Low_complexity 1 40 0 3 1479 5633 193 44 6 chr13 117246552 117247707 -3036605 + L1_Mur3 LINE L1 4682 5880 0 3 1479 403 276 225 53 chr13 117247736 117248114 -3036198 + RLTR12B LTR ERVK 10 452 -76 3 1479 605 216 8 0 chr13 117248268 117248402 -3035910 - Lx4A LINE L1 0 7058 6924 3 1479 3577 156 15 44 chr13 117248499 117249178 -3035134 + RLTR17 LTR ERVK 1 659 -33 3 1479 435 87 0 0 chr13 117250350 117250419 -3033893 + (GA)n Simple_repeat Simple_repeat 2 70 0 3 1479 756 286 25 0 chr13 117250703 117250899 -3033413 + ID_B1 SINE B4 23 223 -1 3 1479 374 257 44 35 chr13 117251025 117251138 -3033174 - Lx8 LINE L1 -1035 6438 6325 3 1479 240 318 71 0 chr13 117251666 117251751 -3032561 + PB1D10 SINE Alu 22 112 -5 3 1479 185 119 24 0 chr13 117251751 117251793 -3032519 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1479 29 28 0 0 chr13 117252417 117252453 -3031859 + AT_rich Low_complexity Low_complexity 1 36 0 3 1479 2058 4 0 0 chr13 117253085 117253317 -3030995 - L1Md_A LINE L1 0 6582 6351 3 1479 548 281 7 7 chr13 117253962 117254098 -3030214 + B1_Mus2 SINE Alu 4 139 -8 3 1479 1080 109 0 0 chr13 117254217 117254364 -3029948 + B1_Mus1 SINE Alu 1 147 -1 3 1479 192 40 0 0 chr13 117254365 117254390 -3029922 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 4 1479 291 317 58 22 chr13 117254613 117254839 -3029473 + L1MEg LINE L1 1119 1352 -4732 4 1479 640 187 0 211 chr13 117255176 117255366 -3028946 - B1_Mur4 SINE Alu 0 150 1 4 1479 263 160 86 74 chr13 117255388 117255469 -3028843 - Lx8 LINE L1 0 7473 7392 4 1479 338 223 128 0 chr13 117255477 117255571 -3028741 - L1MA4A LINE L1 -31 6269 6164 4 1479 21266 20 0 0 chr13 117255587 117258070 -3026242 + L1Md_T LINE L1 3104 5586 -297 4 1479 8981 6 0 0 chr13 117258070 117259095 -3025217 + L1Md_T LINE L1 5587 6582 0 4 1479 1173 61 0 0 chr13 117259113 117259260 -3025052 + B1_Mm SINE Alu 1 147 0 4 1479 683 301 145 25 chr13 117259265 117259789 -3024523 - L1MA4A LINE L1 -152 6151 5565 4 1479 579 267 68 38 chr13 117260475 117260499 -3023813 - L1MA4A LINE L1 -737 5563 5544 4 1479 2862 182 45 52 chr13 117260499 117261114 -3023198 - RMER19C LTR ERVK 0 611 1 4 1479 579 276 56 30 chr13 117261114 117261534 -3022778 - L1MA4A LINE L1 -757 5543 5105 4 1479 345 265 57 51 chr13 117261565 117261740 -3022572 - L1MA4A LINE L1 -1099 5044 4869 4 1479 426 195 0 0 chr13 117262058 117262145 -3022167 + (CA)n Simple_repeat Simple_repeat 2 88 0 4 1479 30 0 0 0 chr13 117262389 117262419 -3021893 + AT_rich Low_complexity Low_complexity 1 30 0 4 1479 313 56 0 0 chr13 117262419 117262473 -3021839 - L1_Mus4 LINE L1 0 6636 6583 4 1479 195 42 0 0 chr13 117262683 117262707 -3021605 + (TA)n Simple_repeat Simple_repeat 1 24 0 4 1479 225 0 0 0 chr13 117262707 117262731 -3021581 + (GA)n Simple_repeat Simple_repeat 2 26 0 4 1479 407 258 24 16 chr13 117262733 117262859 -3021453 - Lx7 LINE L1 -47 7649 7523 4 1479 264 260 8 24 chr13 117262869 117262995 -3021317 - Lx7 LINE L1 -107 7589 7466 4 1479 4063 172 41 8 chr13 117262992 117263794 -3020518 - L1_Mur3 LINE L1 -120 5760 4932 4 1479 399 41 0 0 chr13 117263896 117263945 -3020367 + (TG)n Simple_repeat Simple_repeat 2 50 0 4 1479 783 293 74 11 chr13 117263976 117264245 -3020067 - B4A SINE B4 -4 288 3 4 1479 288 324 36 18 chr13 117264720 117264830 -3019482 + L2c LINE L2 3272 3383 -4 4 1479 32 43 0 0 chr13 117265230 117265276 -3019036 + AT_rich Low_complexity Low_complexity 1 46 0 4 1479 25 31 0 0 chr13 117265306 117265338 -3018974 + AT_rich Low_complexity Low_complexity 1 32 0 4 1479 666 0 0 0 chr13 117267350 117267424 -3016888 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 4 1479 392 280 97 21 chr13 117267638 117267824 -3016488 - MIR SINE MIR -5 257 58 4 1479 452 86 0 14 chr13 117267853 117267924 -3016388 + (GA)n Simple_repeat Simple_repeat 2 71 0 4 1479 726 290 35 0 chr13 117268061 117268261 -3016051 + B3 SINE B2 2 208 -8 4 1479 1169 75 0 0 chr13 117268844 117268991 -3015321 - B1_Mus1 SINE Alu 0 148 2 4 1479 200 363 0 0 chr13 117269483 117269574 -3014738 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 4 1479 206 283 0 0 chr13 117269509 117269562 -3014750 + (TG)n Simple_repeat Simple_repeat 2 54 0 4 1479 370 358 89 59 chr13 117269577 117269779 -3014533 - B4 SINE B4 -1 291 84 4 1479 4484 45 18 0 chr13 117271893 117272446 -3011866 - L1_Mus1 LINE L1 -349 6218 5656 4 1479 2689 74 19 0 chr13 117272446 117272811 -3011501 + L1_Mus1 LINE L1 6194 6565 -2 4 1479 1146 95 0 0 chr13 117273022 117273386 -3010926 + (TC)n Simple_repeat Simple_repeat 1 364 0 4 1479 369 0 0 0 chr13 117273386 117273426 -3010886 + (CA)n Simple_repeat Simple_repeat 1 41 0 4 1479 870 132 0 0 chr13 117273428 117273557 -3010755 - B1_Mus1 SINE Alu -8 140 12 4 1479 2866 35 8 19 chr13 117274144 117274519 -3009793 + L1Md_F2 LINE L1 6212 6582 0 4 1479 264 30 0 0 chr13 117274799 117274832 -3009480 + (CA)n Simple_repeat Simple_repeat 1 33 0 4 1479 365 39 20 0 chr13 117274832 117274883 -3009429 + (TG)n Simple_repeat Simple_repeat 2 53 0 4 1479 1247 74 11 0 chr13 117275373 117275548 -3008764 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 4 1479 221 269 15 15 chr13 117275786 117275854 -3008458 + CT-rich Low_complexity Low_complexity 3 70 0 4 1479 180 97 0 0 chr13 117276502 117276533 -3007779 + (CTTA)n Simple_repeat Simple_repeat 1 31 0 4 1479 1547 216 29 12 chr13 117276534 117277153 -3007159 - Lx5 LINE L1 -1 7049 6358 4 1479 2382 203 14 12 chr13 117277152 117277666 -3006646 + Lx5 LINE L1 5850 6364 -686 4 1479 225 289 72 0 chr13 117277920 117278003 -3006309 - MER20 DNA MER1_type -6 213 125 4 1479 26 30 0 0 chr13 117278524 117278557 -3005755 + AT_rich Low_complexity Low_complexity 1 33 0 4 1479 612 271 8 8 chr13 117278592 117278722 -3005590 - B3 SINE B2 -86 130 1 4 1479 360 77 0 0 chr13 117280208 117280260 -3004052 + (TG)n Simple_repeat Simple_repeat 1 52 0 4 1479 243 0 0 0 chr13 117280392 117280419 -3003893 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 4 1479 415 286 9 0 chr13 117280427 117280539 -3003773 - PB1D9 SINE Alu -7 113 1 4 1479 198 205 25 13 chr13 117281535 117281614 -3002698 + (TA)n Simple_repeat Simple_repeat 2 81 0 4 1479 3060 39 44 8 chr13 117282154 117282539 -3001773 + L1Md_F2 LINE L1 6184 6582 0 4 1479 297 0 0 0 chr13 117283822 117283855 -3000457 + (CA)n Simple_repeat Simple_repeat 2 34 0 4 1479 23 0 0 0 chr13 117287388 117287411 -2996901 + AT_rich Low_complexity Low_complexity 1 23 0 4 1479 473 47 16 0 chr13 117289874 117289938 -2994374 + (TG)n Simple_repeat Simple_repeat 2 66 0 4 1479 180 0 0 0 chr13 117290701 117290721 -2993591 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1479 1146 23 0 0 chr13 117291064 117291196 -2993116 + L1Md_T LINE L1 5455 5586 -297 4 1479 8990 5 0 0 chr13 117291196 117292192 -2992120 + L1Md_T LINE L1 5587 6582 0 4 1479 204 40 0 0 chr13 117292333 117292358 -2991954 + (A)n Simple_repeat Simple_repeat 1 25 0 4 1479 1442 40 0 11 chr13 117292492 117292670 -2991642 + B2_Mm2 SINE B2 2 177 -18 4 1479 471 319 7 43 chr13 117293817 117293958 -2990354 + ID_B1 SINE B4 80 215 -9 4 1479 351 0 0 0 chr13 117294098 117294137 -2990175 + (CA)n Simple_repeat Simple_repeat 1 39 0 4 1479 185 342 72 27 chr13 117294674 117294785 -2989527 + L2c LINE L2 3266 3381 -6 4 1479 3117 279 97 45 chr13 117296054 117297267 -2987045 + RMER1A Other Other 1 902 -128 4 1479 2889 89 0 52 chr13 117297267 117297694 -2986618 - MTB_Mm LTR MaLR 0 407 3 4 1479 3117 278 63 46 chr13 117297694 117297800 -2986512 + RMER1A Other Other 903 1029 -1 4 1479 443 289 14 40 chr13 117298853 117299001 -2985311 - MIR SINE MIR -35 227 84 4 1479 274 318 22 11 chr13 117300486 117300575 -2983737 + MIR SINE MIR 32 121 -141 4 1479 191 217 0 16 chr13 117300895 117300956 -2983356 + GA-rich Low_complexity Low_complexity 1 60 0 4 1479 1074 96 0 0 chr13 117301906 117302127 -2982185 + (CA)n Simple_repeat Simple_repeat 1 221 0 4 1479 294 351 56 62 chr13 117302256 117302417 -2981895 - B4 SINE B4 0 292 133 4 1479 897 121 0 0 chr13 117302459 117302624 -2981688 + (TC)n Simple_repeat Simple_repeat 2 166 0 4 1479 559 289 13 13 chr13 117302722 117302880 -2981432 - B4A SINE B4 -6 286 129 4 1479 27 0 0 0 chr13 117304552 117304579 -2979733 + AT_rich Low_complexity Low_complexity 1 27 0 4 1479 183 162 0 0 chr13 117305135 117305172 -2979140 + C-rich Low_complexity Low_complexity 2 38 0 4 1479 24 0 0 0 chr13 117306043 117306067 -2978245 + AT_rich Low_complexity Low_complexity 1 24 0 4 1479 22 80 0 0 chr13 117306892 117306942 -2977370 + AT_rich Low_complexity Low_complexity 1 50 0 4 1479 387 321 53 9 chr13 117307317 117307430 -2976882 + B3A SINE B2 2 119 -79 4 1479 22 94 0 0 chr13 117308379 117308443 -2975869 + AT_rich Low_complexity Low_complexity 1 64 0 4 1479 669 323 123 56 chr13 117308744 117309384 -2974928 - Lx8 LINE L1 0 7473 6791 4 1480 285 299 82 10 chr13 117309534 117309632 -2974680 + U6 snRNA snRNA 1 105 -2 4 1480 428 255 134 10 chr13 117309634 117309828 -2974484 + L1MB3 LINE L1 5904 6121 -62 4 1480 294 390 53 75 chr13 117310060 117310379 -2973933 + L4 LINE RTE 1284 1595 -434 4 1480 481 283 0 9 chr13 117310638 117310752 -2973560 - PB1D10 SINE Alu -2 115 3 4 1480 261 119 0 0 chr13 117311048 117311090 -2973222 + (TG)n Simple_repeat Simple_repeat 1 42 0 4 1480 180 77 0 0 chr13 117311090 117311116 -2973196 + (GA)n Simple_repeat Simple_repeat 2 27 0 4 1480 286 286 29 17 chr13 117311188 117311362 -2972950 + (TA)n Simple_repeat Simple_repeat 1 176 0 4 1480 297 289 60 0 chr13 117314933 117315016 -2969296 + B1F SINE Alu 10 97 -52 4 1480 219 114 0 0 chr13 117315067 117315102 -2969210 + (TATG)n Simple_repeat Simple_repeat 2 36 0 4 1480 253 322 66 37 chr13 117315364 117315635 -2968677 - L1M5 LINE L1 -614 5626 5348 4 1480 197 243 0 14 chr13 117315673 117315744 -2968568 + CT-rich Low_complexity Low_complexity 3 72 0 4 1480 345 24 0 0 chr13 117316587 117316629 -2967683 + (TG)n Simple_repeat Simple_repeat 2 43 0 4 1480 721 237 46 29 chr13 117317964 117318138 -2966174 + B3A SINE B2 22 198 0 4 1480 187 254 51 0 chr13 117318682 117318741 -2965571 + L2 LINE L2 1810 1871 -1548 4 1480 365 0 22 0 chr13 117318963 117319008 -2965304 + (TAA)n Simple_repeat Simple_repeat 1 46 0 4 1480 188 333 0 0 chr13 117319491 117319545 -2964767 - L2c LINE L2 -21 3366 3313 4 1480 23 0 0 0 chr13 117319878 117319901 -2964411 + AT_rich Low_complexity Low_complexity 1 23 0 4 1480 229 191 0 0 chr13 117321002 117321049 -2963263 + Lx8 LINE L1 7425 7471 -2 4 1480 22 0 0 0 chr13 117321050 117321072 -2963240 + AT_rich Low_complexity Low_complexity 1 22 0 4 1480 238 299 164 0 chr13 117322582 117322649 -2961663 - ID4_ SINE ID -1 82 5 4 1480 186 189 0 0 chr13 117322973 117323010 -2961302 + (CA)n Simple_repeat Simple_repeat 2 38 0 4 1480 247 371 19 0 chr13 117323102 117323207 -2961105 - PB1 SINE Alu -9 118 12 4 1480 407 52 17 0 chr13 117327152 117327210 -2957102 + (TC)n Simple_repeat Simple_repeat 1 59 0 4 1480 645 338 100 16 chr13 117327553 117328103 -2956209 - L2 LINE L2 -1084 2335 1740 4 1480 1480 60 0 0 chr13 117328428 117328611 -2955701 - L1_Mus2 LINE L1 -297 6269 6087 4 1480 510 85 0 12 chr13 117328611 117328694 -2955618 + L1_Mus2 LINE L1 6485 6566 0 4 1480 594 41 0 0 chr13 117329106 117329179 -2955133 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 5 1480 1146 195 26 8 chr13 117329542 117329787 -2954525 + Lx5 LINE L1 6780 7044 -14 5 1480 243 0 0 0 chr13 117329787 117329814 -2954498 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 5 1480 21 71 0 0 chr13 117330105 117330147 -2954165 + AT_rich Low_complexity Low_complexity 1 42 0 5 1480 593 338 0 13 chr13 117330158 117330317 -2953995 - RSINE1 SINE B4 0 165 9 5 1480 289 358 14 28 chr13 117331717 117331858 -2952454 + MIR SINE MIR 90 228 -34 5 1480 486 273 33 65 chr13 117332479 117332499 -2951813 - B1_Mur3 SINE Alu 0 149 139 5 1480 528 81 0 0 chr13 117332499 117332573 -2951739 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 5 1480 508 265 5 11 chr13 117332573 117332705 -2951607 - B1_Mur2 SINE Alu -11 138 2 5 1480 23 0 0 0 chr13 117333628 117333651 -2950661 + AT_rich Low_complexity Low_complexity 1 23 0 5 1480 429 54 0 0 chr13 117334070 117334126 -2950186 + (TG)n Simple_repeat Simple_repeat 1 56 0 5 1480 433 358 0 107 chr13 117334127 117334296 -2950016 - B3A SINE B2 -45 153 3 5 1480 1237 210 82 18 chr13 117334776 117335057 -2949255 - MTD LTR MaLR -53 366 68 5 1480 12688 204 16 19 chr13 117335085 117336417 -2947895 - Lx5 LINE L1 0 7050 5712 5 1480 2941 70 39 0 chr13 117336417 117336802 -2947510 + MTB LTR MaLR 1 400 0 5 1480 12688 209 40 77 chr13 117336802 117337085 -2947227 - Lx5 LINE L1 -166 5711 5452 5 1480 960 143 96 11 chr13 117337085 117337103 -2947209 - B2_Mm1t SINE B2 0 193 176 5 1480 213 39 0 0 chr13 117337103 117337129 -2947183 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 5 1480 1116 109 1 0 chr13 117337129 117337287 -2947025 - B2_Mm2 SINE B2 -18 175 2 5 1480 12688 209 40 77 chr13 117337287 117337773 -2946539 - Lx5 LINE L1 -426 5451 4970 5 1480 2716 131 34 20 chr13 117337773 117338216 -2946096 - Lx3C LINE L1 -2 6974 6526 5 1480 12688 209 40 77 chr13 117338216 117338470 -2945842 - L1_Mur2 LINE L1 -908 4969 4722 5 1480 209 57 0 28 chr13 117338470 117338506 -2945806 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1480 12688 209 40 77 chr13 117338506 117340479 -2943833 - L1_Mur2 LINE L1 -1156 4721 2663 5 1480 1376 202 25 9 chr13 117340527 117340846 -2943466 + L1_Mur2 LINE L1 816 1139 -5947 5 1480 1646 169 29 0 chr13 117340852 117340881 -2943431 + L1_Mur2 LINE L1 2286 2316 -3561 5 1480 3356 70 2 2 chr13 117340881 117341313 -2942999 - L1_Mus2 LINE L1 0 6566 6135 5 1480 1646 169 29 0 chr13 117341313 117341631 -2942681 + L1_Mur2 LINE L1 2317 2642 -3235 5 1480 330 113 97 0 chr13 117341690 117341752 -2942560 + Lx3C LINE L1 6515 6582 -394 5 1480 1145 317 64 46 chr13 117341819 117342642 -2941670 - Lx8 LINE L1 -947 6526 5689 5 1480 234 0 0 0 chr13 117343530 117343556 -2940756 + (TG)n Simple_repeat Simple_repeat 1 26 0 5 1480 211 355 52 7 chr13 117344270 117344406 -2939906 + L2a LINE L2 3283 3424 -2 5 1480 364 296 43 43 chr13 117344709 117344847 -2939465 + B1F SINE Alu 2 139 -10 5 1480 216 0 0 0 chr13 117344862 117344886 -2939426 + (CA)n Simple_repeat Simple_repeat 1 24 0 5 1480 201 294 57 29 chr13 117346323 117346393 -2937919 + MIRb SINE MIR 124 195 -73 5 1480 460 45 15 15 chr13 117346425 117346493 -2937819 + (TCTA)n Simple_repeat Simple_repeat 1 68 0 5 1480 2740 130 98 25 chr13 117347916 117348566 -2935746 - L1_Mur2 LINE L1 -4451 1426 722 5 1480 273 294 71 0 chr13 117349148 117349233 -2935079 + PB1D10 SINE Alu 1 91 -26 5 1480 1100 127 0 6 chr13 117349339 117349485 -2934827 + B2_Mm2 SINE B2 7 152 -43 5 1480 332 43 0 21 chr13 117349485 117349532 -2934780 + (TAAA)n Simple_repeat Simple_repeat 1 46 0 5 1480 1100 138 11 22 chr13 117349532 117349573 -2934739 + B2_Mm2 SINE B2 153 191 -2 5 1480 677 312 107 53 chr13 117349883 117350201 -2934111 + MER2 DNA MER2_type 1 335 -10 5 1480 215 61 30 0 chr13 117350201 117350234 -2934078 + (TA)n Simple_repeat Simple_repeat 2 35 0 5 1480 186 250 18 55 chr13 117351238 117351293 -2933019 + L3b LINE CR1 419 471 -11 5 1480 566 312 20 69 chr13 117351325 117351631 -2932681 + B4A SINE B4 2 292 0 5 1480 213 218 0 0 chr13 117351684 117351729 -2932583 + (CA)n Simple_repeat Simple_repeat 1 45 0 5 1480 315 0 0 0 chr13 117351729 117351764 -2932548 + (GA)n Simple_repeat Simple_repeat 2 36 0 5 1480 213 218 0 0 chr13 117351764 117351773 -2932539 + (CA)n Simple_repeat Simple_repeat 2 10 0 5 1480 864 281 5 19 chr13 117352348 117352562 -2931750 + B3 SINE B2 1 211 -5 5 1480 578 355 111 29 chr13 117353097 117353622 -2930690 - L2 LINE L2 -592 2827 2260 5 1480 319 371 7 57 chr13 117353861 117354001 -2930311 - MLT1N2 LTR MaLR -346 216 84 5 1480 190 306 0 20 chr13 117354546 117354596 -2929716 + L2c LINE L2 3260 3308 -79 5 1480 208 311 122 8 chr13 117354792 117354915 -2929397 + MIR SINE MIR 116 252 -10 5 1480 2886 139 21 11 chr13 117355998 117356469 -2927843 - Lx LINE L1 -7 6647 6172 5 1480 238 290 73 37 chr13 117356490 117356626 -2927686 - MLT1L LTR MaLR -43 567 427 5 1480 4051 196 98 41 chr13 117356951 117358314 -2925998 + L1_Mur3 LINE L1 56 1504 -4376 5 1480 4057 31 0 0 chr13 117358314 117358992 -2925320 + L1Md_T LINE L1 5397 6074 -508 5 1480 653 179 97 0 chr13 117359092 117359287 -2925025 + L1_Mur3 LINE L1 1473 1686 -4194 5 1480 201 121 0 0 chr13 117359693 117359726 -2924586 + (TG)n Simple_repeat Simple_repeat 2 34 0 5 1480 4332 127 24 22 chr13 117360258 117360935 -2923377 - Lx3C LINE L1 -9 6967 6290 5 1480 810 232 8 21 chr13 117361030 117361268 -2923044 + Lx9 LINE L1 7401 7635 -9 5 1480 1190 185 75 92 chr13 117361516 117361874 -2922438 + L1_Mur3 LINE L1 4640 4991 -886 5 1480 1020 108 14 0 chr13 117361899 117362038 -2922274 + B1_Mus2 SINE Alu 1 141 -6 5 1480 5038 200 54 15 chr13 117362045 117363165 -2921147 + Lx5 LINE L1 5880 7042 -8 5 1480 22 0 0 0 chr13 117363309 117363331 -2920981 + AT_rich Low_complexity Low_complexity 1 22 0 5 1480 3369 92 4 2 chr13 117363821 117364280 -2920032 - L1_Mus2 LINE L1 0 6566 6107 5 1480 330 87 0 0 chr13 117365118 117365164 -2919148 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1480 21 0 0 0 chr13 117365642 117365663 -2918649 + AT_rich Low_complexity Low_complexity 1 21 0 5 1480 655 174 97 0 chr13 117366144 117366288 -2918024 + Lx9 LINE L1 7284 7441 -203 5 1480 1938 228 27 0 chr13 117366571 117366984 -2917328 + Lx6 LINE L1 7019 7442 -18 5 1480 2727 194 128 23 chr13 117366997 117367726 -2916586 - RMER1B Other Other -8 1058 181 5 1480 2961 24 0 3 chr13 117367726 117368064 -2916248 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1480 4421 6 4 0 chr13 117368070 117368583 -2915729 - IAPEz-int LTR ERVK -6 6475 5961 5 1480 3883 58 80 2 chr13 117372874 117373427 -2910885 - IAPEz-int LTR ERVK -5878 603 8 5 1480 2994 24 0 0 chr13 117373427 117373764 -2910548 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1480 1302 270 96 10 chr13 117373764 117374160 -2910152 - RMER1B Other Other -592 474 45 5 1480 29 60 0 0 chr13 117374314 117374364 -2909948 + AT_rich Low_complexity Low_complexity 1 50 0 5 1480 213 82 61 0 chr13 117374381 117374430 -2909882 + (TA)n Simple_repeat Simple_repeat 2 53 0 5 1480 339 25 0 0 chr13 117375490 117375530 -2908782 + (CA)n Simple_repeat Simple_repeat 2 41 0 5 1480 572 320 112 0 chr13 117375901 117376098 -2908214 + ID_B1 SINE B4 3 221 -3 5 1480 243 0 0 0 chr13 117376294 117376321 -2907991 + (TA)n Simple_repeat Simple_repeat 1 27 0 5 1480 492 354 65 13 chr13 117377544 117377773 -2906539 + MER121 Unknown Unknown 3 243 -169 5 1480 308 301 160 14 chr13 117377954 117378166 -2906146 + L1M5 LINE L1 3032 3274 -2872 5 1480 213 121 0 0 chr13 117378814 117378847 -2905465 + (T)n Simple_repeat Simple_repeat 1 33 0 5 1480 4307 86 0 3 chr13 117378876 117379460 -2904852 - L1Md_F2 LINE L1 -12 6570 5989 5 1480 813 122 0 37 chr13 117379475 117379611 -2904701 - L1_Mus1 LINE L1 -9 6558 6428 5 1480 270 0 0 0 chr13 117379670 117379700 -2904612 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 5 1480 22 0 0 0 chr13 117382259 117382281 -2902031 + AT_rich Low_complexity Low_complexity 1 22 0 5 1480 314 321 20 95 chr13 117382492 117382518 -2901794 - ID_B1 SINE B4 0 224 88 5 1480 338 300 57 16 chr13 117382518 117382640 -2901672 - B1F1 SINE Alu -16 133 7 5 1480 1168 147 30 76 chr13 117384684 117384920 -2899392 - URR1B DNA MER1_type 0 225 1 5 1480 694 139 115 11 chr13 117385309 117385491 -2898821 + Lx9 LINE L1 7443 7643 -1 5 1480 1548 305 79 31 chr13 117385492 117386236 -2898076 - Lx7 LINE L1 -640 7056 6277 5 1480 22 35 0 0 chr13 117386421 117386450 -2897862 + AT_rich Low_complexity Low_complexity 1 29 0 5 1480 322 336 58 52 chr13 117386539 117386693 -2897619 + RSINE1 SINE B4 2 156 -9 5 1480 29 60 0 0 chr13 117386715 117386765 -2897547 + AT_rich Low_complexity Low_complexity 1 50 0 5 1480 370 149 10 10 chr13 117387391 117387493 -2896819 + (TA)n Simple_repeat Simple_repeat 2 103 0 5 1480 333 0 0 0 chr13 117388530 117388567 -2895745 + (TG)n Simple_repeat Simple_repeat 2 38 0 5 1480 786 182 0 0 chr13 117390008 117390162 -2894150 + T-rich Low_complexity Low_complexity 2 155 0 5 1480 816 11 0 0 chr13 117390399 117390492 -2893820 + (GAA)n Simple_repeat Simple_repeat 2 94 0 5 1480 244 306 34 92 chr13 117391246 117391365 -2892947 + B1_Mm SINE Alu 1 112 -35 5 1480 702 298 111 28 chr13 117391961 117392492 -2891820 + L1MA5 LINE L1 5725 6299 -1 5 1480 726 256 34 5 chr13 117392506 117392710 -2891602 + L1MA9 LINE L1 5776 5985 -327 5 1480 274 320 19 0 chr13 117392721 117392824 -2891488 + L1MA9 LINE L1 6172 6276 -36 5 1480 306 0 0 0 chr13 117392824 117392858 -2891454 + (TG)n Simple_repeat Simple_repeat 1 34 0 5 1480 815 230 0 0 chr13 117392893 117393045 -2891267 - B3A SINE B2 -45 153 2 5 1480 579 279 24 48 chr13 117393246 117393412 -2890900 + RSINE1 SINE B4 3 164 -1 5 1480 203 133 22 22 chr13 117393425 117393471 -2890841 + (TAA)n Simple_repeat Simple_repeat 3 48 0 5 1480 366 220 80 35 chr13 117393542 117393655 -2890657 - PB1D9 SINE Alu -2 118 1 5 1480 234 0 0 0 chr13 117393868 117393894 -2890418 + (GA)n Simple_repeat Simple_repeat 1 26 0 5 1480 216 0 0 0 chr13 117393894 117393918 -2890394 + (ATG)n Simple_repeat Simple_repeat 1 24 0 5 1480 279 348 49 6 chr13 117396197 117396359 -2887953 + MIRb SINE MIR 77 245 -23 5 1480 284 299 86 48 chr13 117397093 117397316 -2886996 + MIR SINE MIR 1 235 -33 5 1480 381 75 0 0 chr13 117397471 117397524 -2886788 + (TAAAA)n Simple_repeat Simple_repeat 2 54 0 6 1480 1867 14 0 0 chr13 117397774 117397989 -2886323 + L1Md_A LINE L1 6329 6543 -39 6 1480 393 206 111 86 chr13 117398142 117398259 -2886053 - B3A SINE B2 -75 123 4 6 1480 474 17 0 0 chr13 117399056 117399116 -2885196 - L1Md_F2 LINE L1 -12 6570 6511 6 1480 833 206 119 15 chr13 117400348 117400550 -2883762 + URR1A DNA MER1_type 2 224 -2 6 1480 4064 57 12 2 chr13 117400651 117401160 -2883152 + L1_Mus1 LINE L1 6054 6567 0 6 1480 3241 36 10 0 chr13 117401541 117401931 -2882381 - MTA_Mm LTR MaLR 0 396 3 6 1480 754 186 27 68 chr13 117402269 117402347 -2881965 + Lx9 LINE L1 7426 7502 -142 6 1480 359 21 21 0 chr13 117402347 117402395 -2881917 + (CA)n Simple_repeat Simple_repeat 1 49 0 6 1480 754 186 27 68 chr13 117402395 117402535 -2881777 + Lx9 LINE L1 7503 7635 -9 6 1480 247 132 0 0 chr13 117402572 117402610 -2881702 + Lx9 LINE L1 6695 6732 -912 6 1480 1431 226 182 20 chr13 117402625 117403027 -2881285 + ERVL-B4-int LTR ERVL 4148 4614 -1100 6 1480 798 108 284 0 chr13 117403032 117403180 -2881132 - Lx2 LINE L1 -378 6619 6430 6 1480 272 194 0 65 chr13 117403146 117403223 -2881089 + Lx2 LINE L1 6925 6996 -1 6 1480 21 0 0 0 chr13 117403225 117403246 -2881066 + AT_rich Low_complexity Low_complexity 1 21 0 6 1480 1876 156 126 3 chr13 117403271 117403619 -2880693 + ORR1B1 LTR MaLR 1 391 -3 6 1480 394 290 81 0 chr13 117403649 117403773 -2880539 + ERVL-B4-int LTR ERVL 4647 4780 -934 6 1480 1234 219 8 4 chr13 117403772 117404020 -2880292 + ERVL-B4-int LTR ERVL 4946 5194 -567 6 1480 822 116 0 0 chr13 117404021 117404142 -2880170 - URR1B DNA MER1_type 0 225 105 6 1480 563 230 32 0 chr13 117404186 117404312 -2880000 + MT2A LTR ERVL 1 130 -403 6 1480 579 284 134 25 chr13 117404310 117404512 -2879800 + MT2A LTR ERVL 303 526 -7 6 1480 2713 254 62 21 chr13 117404514 117405273 -2879039 + Lx9 LINE L1 6739 7519 -125 6 1480 321 26 0 0 chr13 117405273 117405311 -2879001 + (TG)n Simple_repeat Simple_repeat 2 39 0 6 1480 2713 254 62 21 chr13 117405311 117405402 -2878910 + Lx9 LINE L1 7520 7624 -20 6 1480 7994 42 0 1 chr13 117405877 117406842 -2877470 + L1Md_F2 LINE L1 5619 6582 0 6 1480 230 265 14 42 chr13 117408344 117408415 -2875897 - MIR SINE MIR -57 151 83 6 1480 348 64 0 0 chr13 117409635 117409682 -2874630 + (CA)n Simple_repeat Simple_repeat 1 47 0 6 1480 204 97 0 0 chr13 117409683 117409714 -2874598 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 6 1480 24 53 0 0 chr13 117409813 117409851 -2874461 + AT_rich Low_complexity Low_complexity 1 38 0 6 1480 1331 81 27 0 chr13 117409893 117410079 -2874233 + B2_Mm2 SINE B2 3 193 -2 6 1480 201 236 36 0 chr13 117410118 117410173 -2874139 + (TATG)n Simple_repeat Simple_repeat 2 58 0 6 1480 344 209 101 34 chr13 117410244 117410363 -2873949 + Lx9 LINE L1 7391 7517 -127 6 1480 428 176 22 0 chr13 117410366 117410457 -2873855 + (CATA)n Simple_repeat Simple_repeat 4 96 0 6 1480 601 158 99 0 chr13 117410470 117410622 -2873690 + Lx9 LINE L1 7471 7637 -7 6 1480 210 143 0 0 chr13 117411160 117411195 -2873117 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 6 1480 22 0 0 0 chr13 117411217 117411239 -2873073 + AT_rich Low_complexity Low_complexity 1 22 0 6 1480 306 206 0 0 chr13 117411632 117411700 -2872612 + (TA)n Simple_repeat Simple_repeat 2 69 0 6 1480 420 193 0 0 chr13 117412341 117412450 -2871862 + GA-rich Low_complexity Low_complexity 4 112 0 6 1480 182 83 0 53 chr13 117412470 117412508 -2871804 + (CAGAGA)n Simple_repeat Simple_repeat 5 40 0 6 1480 1305 56 0 0 chr13 117412515 117412694 -2871618 + (CA)n Simple_repeat Simple_repeat 2 180 0 6 1480 289 333 23 0 chr13 117413256 117413343 -2870969 + 4.5SRNA scRNA scRNA 4 92 -2 6 1480 235 261 0 0 chr13 117413362 117413408 -2870904 + tRNA-Trp-TGG tRNA tRNA 13 58 -17 6 1480 292 302 40 48 chr13 117413422 117413547 -2870765 + PB1 SINE Alu 2 125 -2 6 1480 203 237 0 0 chr13 117414112 117414150 -2870162 - MIR3 SINE MIR -51 157 120 6 1480 405 0 0 0 chr13 117414450 117414495 -2869817 + (TG)n Simple_repeat Simple_repeat 1 45 0 6 1480 216 0 0 0 chr13 117415727 117415751 -2868561 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 6 1480 191 301 0 27 chr13 117415954 117416029 -2868283 - MIR3 SINE MIR -17 191 119 6 1480 22 0 0 0 chr13 117418377 117418399 -2865913 + AT_rich Low_complexity Low_complexity 1 22 0 6 1480 423 0 0 0 chr13 117420806 117420853 -2863459 + (TTA)n Simple_repeat Simple_repeat 2 48 0 6 1480 900 79 0 0 chr13 117420942 117421068 -2863244 + (TCCC)n Simple_repeat Simple_repeat 3 128 0 6 1480 215 307 19 65 chr13 117424424 117424532 -2859780 - MIRc SINE MIR -2 266 164 6 1480 26 0 0 0 chr13 117424745 117424771 -2859541 + AT_rich Low_complexity Low_complexity 1 26 0 6 1480 27 0 0 0 chr13 117424988 117425015 -2859297 + AT_rich Low_complexity Low_complexity 1 27 0 6 1480 383 268 50 14 chr13 117425427 117425567 -2858745 + B1F SINE Alu 1 145 -4 6 1480 384 248 144 8 chr13 117425813 117425931 -2858381 + B3 SINE B2 1 134 -82 6 1480 351 0 0 0 chr13 117425948 117425987 -2858325 + (TAA)n Simple_repeat Simple_repeat 2 40 0 6 1480 602 333 28 0 chr13 117426247 117426424 -2857888 - B3 SINE B2 -30 186 5 6 1480 664 186 192 53 chr13 117426559 117426746 -2857566 - B3 SINE B2 -3 213 1 6 1480 474 299 53 40 chr13 117426851 117427077 -2857235 - Lx6 LINE L1 -4 7456 7228 6 1480 23 33 0 0 chr13 117429558 117429588 -2854724 + AT_rich Low_complexity Low_complexity 1 30 0 6 1480 228 348 26 9 chr13 117429946 117430059 -2854253 + L2a LINE L2 3307 3421 -5 6 1480 3283 82 13 4 chr13 117430550 117431013 -2853299 + Lx3_Mus LINE L1 6543 7009 0 6 1480 390 152 0 12 chr13 117431825 117431905 -2852407 - RMER1A Other Other -7 1023 945 6 1480 736 300 80 25 chr13 117432902 117433340 -2850972 - L1MB2 LINE L1 -25 6146 5685 6 1480 654 138 0 0 chr13 117433352 117433461 -2850851 + (TCC)n Simple_repeat Simple_repeat 1 109 0 6 1480 310 312 12 0 chr13 117433461 117433541 -2850771 - ID4_ SINE ID 0 83 3 6 1480 432 97 0 0 chr13 117433639 117433701 -2850611 + (TG)n Simple_repeat Simple_repeat 1 62 0 6 1480 638 296 124 6 chr13 117433717 117433894 -2850418 - B4 SINE B4 -18 274 77 6 1480 266 394 51 62 chr13 117434286 117434578 -2849734 - L2c LINE L2 -2 3385 3097 6 1480 270 0 0 0 chr13 117434954 117434984 -2849328 + (TTG)n Simple_repeat Simple_repeat 1 30 0 6 1480 2595 83 5 26 chr13 117435118 117435502 -2848810 - L1_Mus3 LINE L1 -5 6633 6258 6 1480 632 253 107 45 chr13 117437434 117437492 -2846820 - MTE2a LTR MaLR -10 369 302 6 1480 270 0 0 0 chr13 117437492 117437522 -2846790 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6 1480 632 253 107 45 chr13 117437522 117437641 -2846671 - MTE2a LTR MaLR -78 301 181 6 1480 228 184 0 0 chr13 117437665 117437703 -2846609 - MTE2a LTR MaLR -260 119 82 6 1480 360 0 0 0 chr13 117437703 117437743 -2846569 + (CA)n Simple_repeat Simple_repeat 2 41 0 6 1480 645 299 8 0 chr13 117438365 117438499 -2845813 - RSINE1 SINE B4 -17 148 14 6 1480 360 255 27 164 chr13 117438610 117438793 -2845519 + RMER15 LTR ERVL 1 158 -417 6 1480 778 295 43 56 chr13 117438794 117439096 -2845216 + RMER15 LTR ERVL 276 573 -2 6 1480 627 304 121 36 chr13 117440261 117440510 -2843802 - RMER15 LTR ERVL 0 575 306 6 1481 414 0 0 0 chr13 117441006 117441052 -2843260 + (CA)n Simple_repeat Simple_repeat 2 47 0 6 1481 251 293 141 39 chr13 117441237 117441471 -2842841 - Lx9 LINE L1 -27 7617 7360 6 1481 219 292 14 27 chr13 117444660 117444734 -2839578 + MER5A DNA MER1_type 115 187 -2 6 1481 491 0 17 0 chr13 117444820 117444879 -2839433 + (CA)n Simple_repeat Simple_repeat 1 60 0 6 1481 323 381 77 0 chr13 117445528 117445722 -2838590 + MER20 DNA MER1_type 6 214 -5 6 1481 1070 130 6 0 chr13 117446454 117446631 -2837681 + (GAA)n Simple_repeat Simple_repeat 3 180 0 6 1481 441 54 0 0 chr13 117448149 117448205 -2836107 + (CA)n Simple_repeat Simple_repeat 1 56 0 6 1481 22 0 0 0 chr13 117449327 117449349 -2834963 + AT_rich Low_complexity Low_complexity 1 22 0 6 1481 725 301 21 7 chr13 117449570 117449851 -2834461 - MER33 DNA MER1_type -34 290 6 6 1481 340 284 88 69 chr13 117450485 117450644 -2833668 - MER5A1 DNA MER1_type -1 165 4 6 1481 396 283 159 0 chr13 117450719 117450857 -2833455 + RSINE1 SINE B4 4 163 -2 6 1481 604 230 22 60 chr13 117451058 117451192 -2833120 + B1_Mur1 SINE Alu 2 130 -19 6 1481 321 26 0 0 chr13 117451199 117451237 -2833075 + (GGGGA)n Simple_repeat Simple_repeat 3 40 0 6 1481 426 39 0 0 chr13 117451240 117451292 -2833020 + (GA)n Simple_repeat Simple_repeat 1 52 0 6 1481 425 296 50 34 chr13 117451339 117451458 -2832854 - RSINE1 SINE B4 -40 125 5 6 1481 342 330 86 6 chr13 117451552 117451726 -2832586 - L1MEd LINE L1 -4953 1166 979 6 1481 5035 57 41 10 chr13 117452107 117452783 -2831529 - Lx3_Mus LINE L1 0 7009 6313 6 1481 3505 28 0 0 chr13 117452890 117453286 -2831026 + MTA_Mm LTR MaLR 1 396 0 6 1481 3825 0 0 0 chr13 117453393 117453813 -2830499 - L1Md_T LINE L1 0 6582 6163 6 1481 720 303 11 5 chr13 117454220 117454409 -2829903 - ID_B1 SINE B4 -25 199 10 6 1481 297 0 0 0 chr13 117454639 117454672 -2829640 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1481 465 19 0 0 chr13 117454672 117454725 -2829587 + (TA)n Simple_repeat Simple_repeat 2 55 0 6 1481 225 289 60 12 chr13 117454778 117454862 -2829450 + MLT1F-int LTR MaLR 461 548 -941 6 1481 191 157 20 0 chr13 117456273 117456324 -2827988 + (TG)n Simple_repeat Simple_repeat 1 52 0 6 1481 3828 162 65 1 chr13 117457124 117457797 -2826515 + RMER6D LTR ERVK 1 716 -4 6 1481 27 0 0 0 chr13 117458122 117458149 -2826163 + AT_rich Low_complexity Low_complexity 1 27 0 6 1481 641 254 120 16 chr13 117458691 117458883 -2825429 + ID_B1 SINE B4 3 214 -10 6 1481 273 109 0 0 chr13 117458887 117458933 -2825379 + (A)n Simple_repeat Simple_repeat 1 46 0 6 1481 273 29 0 0 chr13 117459003 117459037 -2825275 + (TGG)n Simple_repeat Simple_repeat 1 34 0 6 1481 1297 219 154 42 chr13 117459457 117459834 -2824478 - MTD LTR MaLR 0 419 1 7 1481 597 189 180 0 chr13 117460048 117460170 -2824142 + URR1A DNA MER1_type 1 144 -82 7 1481 650 290 0 0 chr13 117461234 117461379 -2822933 + RSINE1 SINE B4 21 165 0 7 1481 226 348 100 53 chr13 117461379 117461404 -2822908 + B3A SINE B2 20 197 -1 7 1481 25 31 0 0 chr13 117461426 117461458 -2822854 + AT_rich Low_complexity Low_complexity 1 32 0 7 1481 241 330 32 11 chr13 117461506 117461601 -2822711 - L4 LINE RTE -301 1728 1632 7 1481 411 253 0 0 chr13 117462590 117462673 -2821639 + B4A SINE B4 1 83 -209 7 1481 3024 129 4 39 chr13 117462881 117463373 -2820939 - MT2C_Mm LTR ERVL 0 475 1 7 1481 1135 168 113 0 chr13 117464210 117464413 -2819899 + URR1A DNA MER1_type 1 226 0 7 1481 333 0 0 0 chr13 117464425 117464462 -2819850 + (TC)n Simple_repeat Simple_repeat 1 37 0 7 1481 250 190 85 17 chr13 117464620 117464679 -2819633 - MER5A1 DNA MER1_type -101 65 9 6 1481 355 208 156 0 chr13 117464687 117464764 -2819548 + 5S rRNA rRNA 4 92 -29 7 1481 267 302 124 41 chr13 117464764 117464808 -2819504 + AmnSINE1 SINE SINE 4 134 -441 7 1481 673 175 132 32 chr13 117464940 117465129 -2819183 + B3 SINE B2 3 210 -6 7 1481 372 291 77 24 chr13 117465170 117465339 -2818973 - L2 LINE L2 -1395 2024 1847 7 1481 588 313 89 117 chr13 117465609 117466132 -2818180 + RMER20B LTR ERVK 13 550 -77 7 1481 1969 165 71 19 chr13 117466224 117466588 -2817724 - ORR1B1 LTR MaLR -11 383 1 7 1481 330 26 0 0 chr13 117466770 117466809 -2817503 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 7 1481 415 328 29 6 chr13 117466870 117467042 -2817270 - Tigger7 DNA MER2_type -39 2452 2277 7 1481 286 281 24 0 chr13 117467061 117467143 -2817169 + MT2B2 LTR ERVL 169 252 -332 7 1481 327 370 0 30 chr13 117467143 117467310 -2817002 + GA-rich Low_complexity Low_complexity 3 164 0 7 1481 929 33 8 0 chr13 117467580 117467701 -2816611 + (TG)n Simple_repeat Simple_repeat 1 122 0 7 1481 303 93 0 0 chr13 117467957 117468000 -2816312 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 7 1481 4272 132 33 24 chr13 117468700 117469458 -2814854 - L1_Mm LINE L1 -441 5442 4678 7 1481 1501 126 0 12 chr13 117469459 117469708 -2814604 + L1_Mus4 LINE L1 6390 6635 -1 7 1481 256 111 0 36 chr13 117469788 117469844 -2814468 + (TTTG)n Simple_repeat Simple_repeat 2 55 0 7 1481 3360 30 0 0 chr13 117470219 117470613 -2813699 - L1Md_T LINE L1 0 6582 6189 7 1481 633 187 0 0 chr13 117471161 117471300 -2813012 + (TA)n Simple_repeat Simple_repeat 2 140 0 7 1481 1033 212 73 102 chr13 117471629 117471971 -2812341 + ORR1D1 LTR MaLR 43 374 0 7 1481 312 323 121 6 chr13 117472037 117472202 -2812110 - MLT1E3 LTR MaLR -165 459 276 7 1481 2315 36 0 4 chr13 117472407 117472688 -2811624 - L1Md_F3 LINE L1 -1 6583 6304 7 1481 3385 96 24 101 chr13 117472685 117472801 -2811511 + L1_Mus1 LINE L1 5998 6101 -466 7 1481 333 0 0 0 chr13 117472801 117472838 -2811474 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1481 3385 96 24 101 chr13 117472838 117473336 -2810976 + L1_Mus1 LINE L1 6102 6565 -2 7 1481 315 384 17 0 chr13 117473495 117473667 -2810645 + MER2 DNA MER2_type 131 305 -40 7 1481 309 289 20 20 chr13 117474338 117474437 -2809875 + GA-rich Low_complexity Low_complexity 3 101 0 7 1481 218 159 0 31 chr13 117474490 117474555 -2809757 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 7 1481 199 54 54 0 chr13 117474584 117474621 -2809691 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 7 1481 362 144 10 58 chr13 117474687 117474790 -2809522 + CT-rich Low_complexity Low_complexity 1 98 0 7 1481 28 29 0 0 chr13 117475217 117475252 -2809060 + AT_rich Low_complexity Low_complexity 1 35 0 7 1481 233 439 0 22 chr13 117475594 117475640 -2808672 - ID_B1 SINE B4 -9 215 84 7 1481 288 393 0 0 chr13 117475640 117475729 -2808583 - PB1D10 SINE Alu -26 91 3 7 1481 483 95 0 0 chr13 117475788 117475862 -2808450 + (TC)n Simple_repeat Simple_repeat 1 74 0 7 1481 617 0 14 0 chr13 117475862 117475935 -2808377 + (TG)n Simple_repeat Simple_repeat 1 74 0 7 1481 669 254 22 0 chr13 117475937 117476071 -2808241 - B3 SINE B2 -79 137 1 7 1481 336 77 0 0 chr13 117476441 117476493 -2807819 + (T)n Simple_repeat Simple_repeat 1 52 0 7 1481 417 109 0 0 chr13 117477408 117477472 -2806840 + (TA)n Simple_repeat Simple_repeat 2 65 0 7 1481 430 330 0 25 chr13 117477972 117478090 -2806222 + PB1D10 SINE Alu 1 115 -2 7 1481 423 0 0 0 chr13 117478114 117478161 -2806151 + (TG)n Simple_repeat Simple_repeat 2 48 0 7 1481 218 274 47 23 chr13 117478729 117478815 -2805497 + L2a LINE L2 3295 3382 -44 7 1481 1722 62 0 26 chr13 117478869 117479141 -2805171 - L1_Mus1 LINE L1 0 6567 6338 7 1481 1378 71 0 0 chr13 117479141 117479325 -2804987 + L1_Mus1 LINE L1 6163 6346 -221 7 1481 189 154 0 0 chr13 117479729 117479768 -2804544 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 7 1481 3616 164 77 20 chr13 117479768 117480517 -2803795 - Lx4B LINE L1 -4 7054 6263 7 1481 671 73 0 0 chr13 117480557 117480653 -2803659 - L1_Mus1 LINE L1 0 6567 6472 7 1481 664 242 43 98 chr13 117480686 117480942 -2803370 - Lx8 LINE L1 -317 7156 6915 7 1481 319 276 114 0 chr13 117481265 117481388 -2802924 - MLT1C LTR MaLR -71 396 260 7 1481 22 70 0 0 chr13 117481931 117481974 -2802338 + AT_rich Low_complexity Low_complexity 1 43 0 7 1481 198 0 0 0 chr13 117483349 117483371 -2800941 + (TA)n Simple_repeat Simple_repeat 1 22 0 7 1481 377 261 58 16 chr13 117483829 117483950 -2800362 + MIR SINE MIR 16 141 -67 7 1481 1001 37 8 0 chr13 117484751 117484885 -2799427 + (CA)n Simple_repeat Simple_repeat 2 136 0 7 1481 395 176 176 0 chr13 117484900 117484991 -2799321 - Lx9 LINE L1 -168 7476 7370 7 1481 1864 176 5 102 chr13 117485342 117485734 -2798578 + ORR1B1 LTR MaLR 41 394 0 7 1481 459 0 0 0 chr13 117486249 117486300 -2798012 + (TG)n Simple_repeat Simple_repeat 1 51 0 7 1481 253 370 0 0 chr13 117487342 117487423 -2796889 + ID4 SINE ID 2 82 -1 7 1481 558 0 0 0 chr13 117487425 117487487 -2796825 + (GA)n Simple_repeat Simple_repeat 2 63 0 7 1481 985 332 109 41 chr13 117487641 117488156 -2796156 - MER119 DNA MER1_type -3 580 31 7 1481 591 96 0 0 chr13 117488324 117488407 -2795905 - RLTR15 LTR ERVK -276 83 1 7 1481 450 0 0 0 chr13 117488502 117488552 -2795760 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 1481 388 316 19 0 chr13 117489205 117489360 -2794952 + Lx9 LINE L1 6642 6799 -845 7 1481 243 156 0 0 chr13 117489358 117489403 -2794909 + Lx7 LINE L1 6959 7003 -693 7 1481 34 24 0 0 chr13 117489535 117489576 -2794736 + AT_rich Low_complexity Low_complexity 1 41 0 7 1481 908 313 37 20 chr13 117489662 117490011 -2794301 + MLT1A0 LTR MaLR 11 365 0 7 1481 242 316 40 20 chr13 117490047 117490224 -2794088 - MIR SINE MIR -60 208 17 7 1481 225 0 48 48 chr13 117490739 117490781 -2793531 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 7 1481 934 162 0 0 chr13 117490787 117490929 -2793383 - B1_Mus1 SINE Alu -5 143 2 7 1481 273 119 0 0 chr13 117491111 117491153 -2793159 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 7 1481 474 59 0 0 chr13 117491177 117491245 -2793067 + L1Md_T LINE L1 6515 6582 0 7 1481 246 289 13 0 chr13 117491661 117491752 -2792560 - MIRb SINE MIR -30 238 141 7 1481 489 34 0 0 chr13 117494303 117494362 -2789950 + (TG)n Simple_repeat Simple_repeat 1 59 0 7 1481 216 0 0 0 chr13 117495129 117495153 -2789159 + (TA)n Simple_repeat Simple_repeat 2 25 0 7 1481 369 0 0 0 chr13 117495173 117495214 -2789098 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 7 1481 405 0 0 0 chr13 117495799 117495844 -2788468 + (TG)n Simple_repeat Simple_repeat 2 46 0 7 1481 257 281 16 0 chr13 117496749 117496813 -2787499 + GA-rich Low_complexity Low_complexity 2 66 0 7 1481 183 114 0 0 chr13 117498334 117498369 -2785943 + (G)n Simple_repeat Simple_repeat 1 35 0 7 1481 198 0 0 0 chr13 117499082 117499104 -2785208 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 7 1481 354 45 0 0 chr13 117499613 117499657 -2784655 + (GA)n Simple_repeat Simple_repeat 1 44 0 7 1481 378 0 0 0 chr13 117499867 117499909 -2784403 + (TG)n Simple_repeat Simple_repeat 2 43 0 7 1481 216 0 0 0 chr13 117505085 117505109 -2779203 + (TC)n Simple_repeat Simple_repeat 2 25 0 1 1481 261 0 0 0 chr13 117505109 117505137 -2779175 + (TG)n Simple_repeat Simple_repeat 2 30 0 2 1481 189 331 56 40 chr13 117505664 117505790 -2778522 + MIR SINE MIR 13 140 -122 3 1481 497 189 41 8 chr13 117505807 117505930 -2778382 + Lx LINE L1 6525 6651 -3 4 1481 219 313 87 68 chr13 117505987 117506090 -2778222 + L2b LINE L2 3059 3163 -212 5 1481 639 266 88 84 chr13 117506263 117506526 -2777786 - B4 SINE B4 -19 273 10 6 1481 237 317 58 19 chr13 117506916 117507019 -2777293 - MIRb SINE MIR -79 189 83 7 1481 1220 83 27 27 chr13 117507630 117507816 -2776496 - B2_Mm2 SINE B2 -8 187 2 8 1481 191 36 36 0 chr13 117508872 117508900 -2775412 + (TA)n Simple_repeat Simple_repeat 1 29 0 9 1481 754 286 25 40 chr13 117509357 117509374 -2774938 + B3 SINE B2 5 16 -200 1 1481 1734 194 45 32 chr13 117509374 117509751 -2774561 - ORR1C2 LTR MaLR 0 384 3 1 1481 754 286 25 40 chr13 117509751 117509933 -2774379 + B3 SINE B2 17 201 -15 1 1481 598 73 0 0 chr13 117509933 117510029 -2774283 - L1VL4 LINE L1 -5453 849 754 1 1481 7163 76 4 59 chr13 117510029 117511499 -2772813 + L1_Mus3 LINE L1 5228 6633 -5 1 1481 489 34 0 0 chr13 117512605 117512664 -2771648 + (TTTC)n Simple_repeat Simple_repeat 1 59 0 1 1481 2627 91 0 59 chr13 117513209 117513618 -2770694 + Lx LINE L1 6263 6647 -7 1 1481 435 219 10 59 chr13 117513697 117513799 -2770513 - PB1D10 SINE Alu 0 117 21 1 1481 324 0 0 0 chr13 117513832 117513868 -2770444 + (TTTTA)n Simple_repeat Simple_repeat 3 38 0 1 1481 23534 96 43 7 chr13 117514496 117519900 -2764412 - L1Md_F2 LINE L1 0 6582 575 1 1481 281 239 39 112 chr13 117519967 117520130 -2764182 + MT2B LTR ERVL 109 259 -342 1 1481 595 215 32 32 chr13 117520033 117520157 -2764155 + B1_Mur1 SINE Alu 10 133 -16 2 1481 2190 213 57 149 chr13 117520157 117520767 -2763545 + RMER19C LTR ERVK 1 577 -34 2 1481 1173 48 7 0 chr13 117520767 117520913 -2763399 + B1_Mm SINE Alu 1 147 0 2 1481 2190 213 57 149 chr13 117520913 117520975 -2763337 + RMER19C LTR ERVK 578 611 0 2 1481 252 383 169 13 chr13 117522107 117522332 -2761980 + MamGypLTR2 LTR Gypsy 765 1024 -165 2 1481 802 296 146 46 chr13 117523141 117523622 -2760690 + MT2A LTR ERVL 5 533 0 2 1481 324 314 10 19 chr13 117523622 117523694 -2760618 - MTEa LTR MaLR -308 71 1 2 1481 258 32 0 0 chr13 117523863 117523894 -2760418 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2 1481 391 202 61 0 chr13 117524907 117525021 -2759291 - Lx9 LINE L1 -2 7642 7522 2 1481 472 234 46 18 chr13 117525067 117525176 -2759136 + B3 SINE B2 96 207 -9 2 1481 571 282 116 20 chr13 117525664 117525863 -2758449 - ID_B1 SINE B4 0 224 7 2 1481 252 77 0 0 chr13 117526915 117526954 -2757358 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 3 1481 315 161 0 0 chr13 117527417 117527473 -2756839 + (TG)n Simple_repeat Simple_repeat 2 57 0 3 1481 216 0 0 0 chr13 117528346 117528370 -2755942 + (T)n Simple_repeat Simple_repeat 1 24 0 3 1481 3422 226 32 24 chr13 117528570 117529134 -2755178 - Lx6 LINE L1 0 7460 6889 3 1481 279 0 0 0 chr13 117529134 117529165 -2755147 + (TC)n Simple_repeat Simple_repeat 2 32 0 3 1481 369 0 0 0 chr13 117529165 117529205 -2755107 + (TG)n Simple_repeat Simple_repeat 2 42 0 3 1481 243 88 0 0 chr13 117529207 117529241 -2755071 + (CG)n Simple_repeat Simple_repeat 2 35 0 3 1481 3422 226 32 24 chr13 117529241 117529494 -2754818 - Lx6 LINE L1 -572 6888 6634 3 1481 647 287 76 40 chr13 117529715 117530161 -2754151 - L1MA9 LINE L1 -184 6128 5667 3 1481 349 216 23 0 chr13 117530217 117530305 -2754007 - L1MA9 LINE L1 -777 5535 5446 3 1481 330 269 107 70 chr13 117530917 117531246 -2753066 - L1MA9 LINE L1 -772 5371 5046 3 1481 272 375 0 8 chr13 117531287 117531408 -2752904 + (TG)n Simple_repeat Simple_repeat 1 120 0 3 1481 416 336 62 28 chr13 117531483 117531627 -2752685 - B4A SINE B4 -142 150 2 3 1481 400 302 49 11 chr13 117531640 117531824 -2752488 - L1MA9 LINE L1 -1135 5008 4818 3 1481 1069 292 101 61 chr13 117531825 117532903 -2751409 - L1MA9 LINE L1 -1529 4611 3491 3 1481 231 36 0 0 chr13 117532924 117532952 -2751360 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 4 1481 2973 196 118 24 chr13 117532996 117533191 -2751121 - Lx7 LINE L1 -115 7581 7354 4 1481 534 31 0 0 chr13 117533191 117533255 -2751057 + (GA)n Simple_repeat Simple_repeat 1 64 0 4 1481 2973 196 118 24 chr13 117533255 117533837 -2750475 - Lx7 LINE L1 -343 7353 6731 4 1481 15625 170 35 54 chr13 117533857 117535142 -2749170 - L1_Mur3 LINE L1 -984 4896 3682 4 1481 3902 101 30 28 chr13 117535142 117535746 -2748566 - Lx3B LINE L1 -5 6968 6364 4 1481 15625 170 35 54 chr13 117535746 117536995 -2747317 - L1_Mur3 LINE L1 -2199 3681 2407 4 1481 1181 132 5 21 chr13 117536995 117537188 -2747124 + B2_Mm2 SINE B2 4 193 -2 4 1481 15625 170 35 54 chr13 117537188 117537516 -2746796 - L1_Mur3 LINE L1 -3474 2406 2081 4 1481 270 0 0 0 chr13 117537516 117537546 -2746766 + (TC)n Simple_repeat Simple_repeat 2 31 0 4 1481 444 37 0 0 chr13 117537546 117537599 -2746713 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1481 15625 170 35 54 chr13 117537599 117537968 -2746344 - L1_Mur3 LINE L1 -3800 2080 1691 4 1481 183 42 0 0 chr13 117537968 117537992 -2746320 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 4 1481 15625 204 48 42 chr13 117537992 117539063 -2745249 - L1_Mur3 LINE L1 -4190 1690 637 4 1481 1319 75 42 26 chr13 117539063 117539254 -2745058 + B2_Mm2 SINE B2 1 194 -1 4 1481 3295 238 60 31 chr13 117539254 117539605 -2744707 - L1_Mur3 LINE L1 -7092 636 286 4 1481 330 315 107 10 chr13 117539639 117540123 -2744189 - L1MA9 LINE L1 -2711 3432 2902 3 1481 1208 132 0 5 chr13 117542160 117542351 -2741961 + B2_Mm2 SINE B2 1 190 -5 5 1481 364 311 58 0 chr13 117542372 117542475 -2741837 - PB1D9 SINE Alu -5 115 7 5 1481 287 169 0 0 chr13 117542539 117542598 -2741714 - Lx4A LINE L1 -1 7057 6999 5 1481 480 59 0 0 chr13 117542787 117542855 -2741457 + (TC)n Simple_repeat Simple_repeat 1 68 0 5 1481 387 0 0 0 chr13 117542855 117542898 -2741414 + (TG)n Simple_repeat Simple_repeat 2 44 0 5 1481 324 268 30 95 chr13 117543092 117543261 -2741051 - RMER4B LTR ERVK -421 164 7 5 1481 566 371 53 36 chr13 117543329 117543687 -2740625 - L1M5 LINE L1 -462 5702 5339 5 1481 571 338 92 29 chr13 117544090 117544535 -2739777 - RMER5 LTR ERV1 0 534 62 5 1481 488 259 43 33 chr13 117545169 117545322 -2738990 - B3A SINE B2 -34 159 4 5 1481 408 328 0 30 chr13 117545352 117545487 -2738825 - B1F1 SINE Alu -1 148 18 5 1481 249 301 0 27 chr13 117545511 117545586 -2738726 - ID4_ SINE ID -6 77 5 6 1481 336 302 19 0 chr13 117545988 117546094 -2738218 - PB1D10 SINE Alu 0 117 10 6 1481 242 355 86 14 chr13 117546633 117546773 -2737539 + L2a LINE L2 2679 2828 -591 6 1481 231 61 60 20 chr13 117546783 117546833 -2737479 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 6 1481 184 349 60 0 chr13 117546895 117546978 -2737334 + L2a LINE L2 2963 3050 -369 6 1481 214 354 104 27 chr13 117547040 117547261 -2737051 + L2a LINE L2 3165 3402 -24 6 1481 335 320 0 0 chr13 117547284 117547362 -2736950 - ID4_ SINE ID 0 83 6 6 1481 196 383 12 0 chr13 117547381 117547462 -2736850 + L2b LINE L2 3285 3366 -9 6 1481 24 0 0 0 chr13 117547600 117547624 -2736688 + AT_rich Low_complexity Low_complexity 1 24 0 6 1481 302 340 19 84 chr13 117547729 117547883 -2736429 - ID_B1 SINE B4 -79 145 2 6 1481 727 292 30 84 chr13 117549189 117549488 -2734824 - B4 SINE B4 -8 284 2 6 1481 229 423 14 27 chr13 117550086 117550232 -2734080 - MIRb SINE MIR -38 230 87 6 1481 5155 170 60 11 chr13 117550331 117551459 -2732853 - Lx2B LINE L1 -8 6992 5809 7 1481 565 156 24 24 chr13 117551459 117551584 -2732728 + Lx4B LINE L1 6930 7054 -4 7 1481 213 39 0 0 chr13 117551755 117551781 -2732531 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 7 1481 363 301 61 61 chr13 117552126 117552289 -2732023 + MLT2B1 LTR ERVL 399 561 -6 7 1481 502 202 0 25 chr13 117552449 117552571 -2731741 + Lx4A LINE L1 6939 7057 -1 7 1481 346 258 55 2 chr13 117552574 117552754 -2731558 + L1M4 LINE L1 5652 5853 -326 7 1481 225 154 0 0 chr13 117553627 117553666 -2730646 + (CGTG)n Simple_repeat Simple_repeat 1 39 0 7 1481 489 160 79 16 chr13 117554046 117554173 -2730139 + Lx3A LINE L1 6846 6980 -1 7 1481 528 264 140 38 chr13 117555338 117555574 -2728738 - MLT1E1A LTR MaLR -16 664 405 7 1481 763 219 165 10 chr13 117556239 117556433 -2727879 - URR1B DNA MER1_type 0 225 2 7 1481 25 51 0 0 chr13 117557042 117557081 -2727231 + AT_rich Low_complexity Low_complexity 1 39 0 8 1481 309 68 0 0 chr13 117557204 117557248 -2727064 + (T)n Simple_repeat Simple_repeat 1 44 0 8 1481 315 0 0 0 chr13 117558374 117558409 -2725903 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8 1481 704 243 7 0 chr13 117558439 117558579 -2725733 + B1_Mur3 SINE Alu 2 142 -7 8 1481 1898 218 88 7 chr13 117558595 117559149 -2725163 - Lx9 LINE L1 -25 7619 7021 8 1481 193 109 43 0 chr13 117559195 117559241 -2725071 + T-rich Low_complexity Low_complexity 2 49 0 8 1481 1891 204 22 31 chr13 117559268 117559714 -2724598 - Lx9 LINE L1 -601 7043 6602 8 1481 784 241 0 36 chr13 117559732 117559900 -2724412 - RSINE1 SINE B4 -1 164 3 8 1481 321 264 11 0 chr13 117560173 117560264 -2724048 - L1M2 LINE L1 -1184 4959 4868 8 1481 1198 269 7 29 chr13 117560264 117560571 -2723741 - MTD LTR MaLR -97 322 23 8 1481 1111 124 18 1 chr13 117560716 117560903 -2723409 + B2_Mm2 SINE B2 2 203 -13 8 1481 301 350 24 24 chr13 117560909 117561035 -2723277 + HAL1-3A_ME LINE L1 1975 2100 -758 9 1481 863 313 51 15 chr13 117561211 117561649 -2722663 + Lx8 LINE L1 6367 6836 -860 9 1481 624 189 161 5 chr13 117561654 117561789 -2722523 - Lx9 LINE L1 -1 7643 7487 9 1481 189 0 0 0 chr13 117561789 117561810 -2722502 + (TATG)n Simple_repeat Simple_repeat 3 23 0 9 1481 624 189 161 5 chr13 117561810 117561866 -2722446 - Lx9 LINE L1 -158 7486 7423 9 1481 354 98 0 0 chr13 117561916 117561967 -2722345 + (TG)n Simple_repeat Simple_repeat 2 52 0 9 1481 4144 235 73 24 chr13 117561997 117564090 -2720222 - Lx9 LINE L1 -691 6953 4617 9 1481 2036 191 66 13 chr13 117564090 117564482 -2719830 + MTC LTR MaLR 1 413 -8 9 1481 2096 186 59 47 chr13 117564487 117565084 -2719228 - Lx9 LINE L1 -1227 4620 4017 9 1481 831 275 29 12 chr13 117565062 117565330 -2718982 + Lx8 LINE L1 6818 7087 -609 9 1481 890 148 0 6 chr13 117565331 117565494 -2718818 + GA-rich Low_complexity Low_complexity 1 162 0 9 1481 581 312 88 29 chr13 117565494 117565834 -2718478 + Lx8 LINE L1 7105 7464 -9 9 1481 772 155 28 0 chr13 117565982 117566124 -2718188 - L1_Mus2 LINE L1 0 6566 6421 9 1481 1435 273 83 42 chr13 117567118 117567777 -2716535 - L1MB1 LINE L1 -130 6038 5353 9 1481 365 271 136 60 chr13 117567817 117568052 -2716260 + L1M4 LINE L1 4726 4978 -1168 1 1481 804 330 53 39 chr13 117568052 117568602 -2715710 + Lx8 LINE L1 6760 7337 -136 1 1481 264 176 8 18 chr13 117569820 117569877 -2714435 - B1F SINE Alu 0 149 70 1 1481 566 353 74 16 chr13 117570116 117570372 -2713940 - AmnSINE1 SINE SINE -193 382 112 1 1481 277 301 75 9 chr13 117570677 117570834 -2713478 - MTE2a LTR MaLR -10 369 206 1 1481 393 117 0 0 chr13 117571096 117571156 -2713156 + (TG)n Simple_repeat Simple_repeat 2 61 0 1 1481 326 324 71 41 chr13 117571221 117571417 -2712895 + L2 LINE L2 2799 3000 -419 1 1482 1062 118 0 12 chr13 117571644 117571893 -2712419 + (TTTC)n Simple_repeat Simple_repeat 1 245 0 1 1482 207 0 0 0 chr13 117572167 117572190 -2712122 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1 1482 314 23 23 0 chr13 117572196 117572239 -2712073 + (CAA)n Simple_repeat Simple_repeat 2 45 0 1 1482 252 0 0 0 chr13 117572809 117572837 -2711475 + (A)n Simple_repeat Simple_repeat 1 28 0 1 1482 733 236 28 101 chr13 117573048 117573227 -2711085 + B3A SINE B2 33 198 0 1 1482 2351 88 6 0 chr13 117573297 117573614 -2710698 - ORR1A2 LTR MaLR -8 319 1 1 1482 4817 147 73 17 chr13 117573867 117574706 -2709606 + Lx4A LINE L1 6173 7058 0 1 1482 21 0 0 0 chr13 117574706 117574727 -2709585 + AT_rich Low_complexity Low_complexity 1 21 0 1 1482 286 302 100 8 chr13 117574900 117575030 -2709282 + B1F2 SINE Alu 1 142 -7 1 1482 225 378 0 0 chr13 117575043 117575117 -2709195 + ID2 SINE ID 10 83 0 1 1482 405 0 0 0 chr13 117575236 117575281 -2709031 + (TG)n Simple_repeat Simple_repeat 1 45 0 1 1482 611 263 167 29 chr13 117576176 117576548 -2707764 + L1M2 LINE L1 4831 5256 -887 1 1482 198 0 0 0 chr13 117576548 117576570 -2707742 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 1 1482 611 263 167 29 chr13 117576570 117576682 -2707630 + L1M2 LINE L1 5257 5381 -762 1 1482 622 276 39 8 chr13 117576719 117576978 -2707334 + L1M2 LINE L1 5380 5646 -654 1 1482 271 161 22 22 chr13 117577116 117577205 -2707107 + (CAGAGA)n Simple_repeat Simple_repeat 2 90 0 1 1482 522 275 76 17 chr13 117577435 117577672 -2706640 + L1MA6 LINE L1 5638 5888 -412 1 1482 5377 61 22 4 chr13 117578056 117578750 -2705562 - L1_Mus1 LINE L1 -1 6566 5861 1 1482 1819 63 0 4 chr13 117578764 117579003 -2705309 - L1Md_F2 LINE L1 0 6582 6345 1 1482 8509 52 4 0 chr13 117579003 117580592 -2703720 + L1Md_F2 LINE L1 4772 6365 -217 1 1482 753 172 129 12 chr13 117580785 117580956 -2703356 - URR1A DNA MER1_type -33 193 3 1 1482 223 329 40 0 chr13 117582138 117582214 -2702098 - ID4_ SINE ID -3 80 2 1 1482 489 62 0 0 chr13 117582558 117582623 -2701689 + (TG)n Simple_repeat Simple_repeat 2 66 0 1 1482 1649 236 72 0 chr13 117582624 117582997 -2701315 + MTD LTR MaLR 18 417 -2 1 1482 213 39 0 0 chr13 117583073 117583099 -2701213 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1 1482 2720 117 6 112 chr13 117583891 117584390 -2699922 + RLTR41 LTR ERV1 1 446 0 1 1482 917 195 6 24 chr13 117585721 117585889 -2698423 + ORR1C2 LTR MaLR 1 165 -209 1 1482 5858 180 95 14 chr13 117585889 117587254 -2697058 + Lx3C LINE L1 5518 6998 -2 1 1482 951 215 53 35 chr13 117587533 117587760 -2696552 + ORR1C2 LTR MaLR 151 381 -3 1 1482 460 306 0 47 chr13 117588063 117588190 -2696122 + B1F SINE Alu 29 149 0 1 1482 180 0 0 0 chr13 117588192 117588212 -2696100 + (A)n Simple_repeat Simple_repeat 1 20 0 1 1482 486 128 0 71 chr13 117588508 117588592 -2695720 + B1_Mus1 SINE Alu 2 79 -69 1 1482 713 264 17 117 chr13 117590042 117590282 -2694030 - B3A SINE B2 0 216 1 1 1482 348 328 21 63 chr13 117590367 117590510 -2693802 - B1F SINE Alu -9 140 4 1 1482 318 306 156 60 chr13 117590722 117590972 -2693340 + MLT1A LTR MaLR 93 366 -8 1 1482 2626 109 9 40 chr13 117591325 117591538 -2692774 - Lx2 LINE L1 0 6997 6787 1 1482 3446 20 5 0 chr13 117591538 117591932 -2692380 - MTA_Mm LTR MaLR 0 396 1 1 1482 2626 109 9 40 chr13 117591932 117592138 -2692174 - Lx2 LINE L1 -211 6786 6591 1 1482 192 40 0 0 chr13 117592610 117592635 -2691677 + (T)n Simple_repeat Simple_repeat 1 25 0 1 1482 285 146 0 0 chr13 117592714 117592762 -2691550 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1 1482 200 306 16 0 chr13 117592913 117592975 -2691337 + MIR SINE MIR 166 228 -34 1 1482 31 0 0 0 chr13 117593346 117593377 -2690935 + AT_rich Low_complexity Low_complexity 1 31 0 1 1482 704 294 83 24 chr13 117594309 117594598 -2689714 + MLT2D LTR ERVL 1 306 -108 1 1482 184 238 33 130 chr13 117595742 117595834 -2688478 - MIRm SINE MIR -130 146 64 1 1482 550 216 85 82 chr13 117595911 117596204 -2688108 + L1_Mur3 LINE L1 289 582 -7130 1 1482 204 97 0 0 chr13 117596205 117596236 -2688076 + (TCC)n Simple_repeat Simple_repeat 1 31 0 1 1482 18120 208 42 44 chr13 117596240 117597921 -2686391 + Lx7 LINE L1 333 2056 -3824 1 1482 426 85 0 0 chr13 117597921 117597980 -2686332 + (CA)n Simple_repeat Simple_repeat 2 60 0 1 1482 411 21 0 0 chr13 117597981 117598029 -2686283 + (CCA)n Simple_repeat Simple_repeat 3 50 0 1 1482 18120 177 45 73 chr13 117598029 117598313 -2685999 + Lx7 LINE L1 2057 2357 -3523 1 1482 1140 62 0 33 chr13 117598313 117598464 -2685848 + B1_Mus2 SINE Alu 2 147 0 1 1482 18120 177 45 73 chr13 117598464 117600116 -2684196 + Lx7 LINE L1 2358 4044 -1836 1 1482 2751 88 30 12 chr13 117600116 117600518 -2683794 - RLTR9E LTR ERVK 0 409 1 1 1482 18120 177 45 73 chr13 117600518 117601107 -2683205 + Lx7 LINE L1 4045 4651 -1229 1 1482 378 0 0 0 chr13 117601107 117601149 -2683163 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1 1482 18120 198 109 52 chr13 117601149 117604162 -2680150 + Lx7 LINE L1 4652 7696 0 1 1482 4145 60 37 4 chr13 117604255 117604791 -2679521 - L1Md_F2 LINE L1 -16 6566 6013 1 1482 320 178 13 52 chr13 117604792 117604869 -2679443 + PB1D7 SINE Alu 13 86 -34 1 1482 273 270 0 39 chr13 117607209 117607286 -2677026 + (CA)n Simple_repeat Simple_repeat 1 74 0 1 1482 538 243 49 49 chr13 117607331 117607474 -2676838 + B1_Mur1 SINE Alu 6 148 -1 1 1482 743 188 6 0 chr13 117607584 117607760 -2676552 + (CA)n Simple_repeat Simple_repeat 2 178 0 1 1482 435 288 84 21 chr13 117608575 117608717 -2675595 + ID_B1 SINE B4 73 223 -1 1 1482 446 0 19 0 chr13 117610057 117610111 -2674201 + (TC)n Simple_repeat Simple_repeat 1 55 0 1 1482 204 158 0 0 chr13 117610134 117610172 -2674140 + (CA)n Simple_repeat Simple_repeat 1 38 0 1 1482 545 299 86 25 chr13 117610254 117610546 -2673766 - Lx7 LINE L1 -156 7317 7000 1 1482 279 333 34 8 chr13 117612626 117612744 -2671568 - YREP_Mm Unknown Unknown -1485 327 207 1 1482 522 243 37 9 chr13 117612641 117612749 -2671563 + ID_B1 SINE B4 87 197 -27 1 1482 182 222 0 18 chr13 117612750 117612805 -2671507 + GA-rich Low_complexity Low_complexity 2 55 0 1 1482 241 290 53 41 chr13 117612805 117612974 -2671338 + L1MDa LINE L1 1010 1180 -5453 1 1482 283 271 174 18 chr13 117612974 117613083 -2671229 - B4 SINE B4 -55 237 112 1 1482 449 208 18 70 chr13 117612995 117613109 -2671203 - PB1D9 SINE Alu -8 112 5 1 1482 470 287 55 62 chr13 117613108 117613253 -2671059 - ID_B1 SINE B4 -80 144 1 1 1482 313 214 137 43 chr13 117613263 117613380 -2670932 + L1MDa LINE L1 1184 1311 -5322 1 1482 358 269 73 46 chr13 117613668 117613777 -2670535 + PB1D10 SINE Alu 6 117 0 1 1482 1046 278 27 16 chr13 117614005 117614496 -2669816 - Lx7 LINE L1 -1362 6111 5609 1 1482 602 283 185 20 chr13 117614634 117614937 -2669375 + Lx8 LINE L1 7119 7471 -2 1 1482 7575 65 8 2 chr13 117614967 117616725 -2667587 - L1_Mus1 LINE L1 0 6567 4800 1 1482 300 331 82 63 chr13 117616755 117616913 -2667399 + RSINE1 SINE B4 2 162 -3 1 1482 336 308 100 47 chr13 117617049 117617199 -2667113 + HAL1-3A_ME LINE L1 2282 2439 -419 1 1482 259 194 0 61 chr13 117617199 117617265 -2667047 + GA-rich Low_complexity Low_complexity 2 63 0 1 1482 2743 71 52 13 chr13 117619060 117619445 -2664867 + MTB LTR MaLR 1 400 0 1 1482 262 363 18 104 chr13 117619528 117619552 -2664760 + B4A SINE B4 69 217 -75 1 1482 588 289 0 1 chr13 117619552 117619691 -2664621 + B1F2 SINE Alu 2 139 -10 1 1482 279 219 0 30 chr13 117619720 117619819 -2664493 + GA-rich Low_complexity Low_complexity 3 98 0 1 1482 447 372 54 29 chr13 117619828 117620069 -2664243 - LTR33A_ LTR ERVL -40 491 245 1 1482 230 386 104 12 chr13 117620257 117620430 -2663882 - LTR33A_ LTR ERVL -333 198 10 1 1482 320 308 69 65 chr13 117621016 117621212 -2663100 + MIR SINE MIR 8 210 -52 1 1482 3060 46 8 8 chr13 117621212 117621603 -2662709 + L1Md_F3 LINE L1 6193 6583 -1 1 1482 320 311 96 32 chr13 117621603 117621628 -2662684 + MIR SINE MIR 211 232 -30 1 1482 308 388 34 38 chr13 117622604 117622840 -2661472 - L1ME3A LINE L1 -55 6118 5884 1 1482 1981 217 34 20 chr13 117624365 117624869 -2659443 - Lx9 LINE L1 -1 7643 7133 1 1482 205 156 0 0 chr13 117625519 117625551 -2658761 + (CAG)n Simple_repeat Simple_repeat 1 32 0 1 1482 238 243 112 78 chr13 117625591 117625707 -2658605 - L2c LINE L2 -5 3382 3263 1 1482 680 303 5 5 chr13 117625760 117625969 -2658343 + B3 SINE B2 2 210 -6 1 1482 32342 67 3 15 chr13 117626026 117631221 -2653091 + L1Md_F2 LINE L1 461 5586 -297 1 1482 8040 49 1 8 chr13 117631221 117632216 -2652096 + L1Md_F2 LINE L1 5587 6574 -8 1 1482 632 13 13 0 chr13 117632728 117632805 -2651507 + (GA)n Simple_repeat Simple_repeat 1 78 0 1 1482 961 237 19 14 chr13 117634982 117635059 -2649253 + B3 SINE B2 2 76 -140 1 1482 1784 140 45 63 chr13 117635059 117635394 -2648918 - ORR1A4 LTR MaLR 0 329 1 1 1482 961 237 19 14 chr13 117635394 117635530 -2648782 + B3 SINE B2 77 216 0 1 1482 469 116 35 47 chr13 117635538 117635710 -2648602 + (TA)n Simple_repeat Simple_repeat 2 171 0 1 1482 282 83 0 0 chr13 117635710 117635746 -2648566 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1482 31 44 0 0 chr13 117635895 117635940 -2648372 + AT_rich Low_complexity Low_complexity 1 45 0 1 1482 218 290 128 12 chr13 117636214 117636378 -2647934 - L2 LINE L2 -460 2959 2777 1 1482 252 0 0 0 chr13 117637062 117637090 -2647222 + (CA)n Simple_repeat Simple_repeat 1 28 0 1 1482 544 341 22 7 chr13 117639104 117639240 -2645072 + B1F SINE Alu 1 138 -11 1 1482 219 103 0 0 chr13 117640073 117640112 -2644200 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 1 1482 216 67 0 0 chr13 117644659 117644689 -2639623 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 1 1482 583 282 24 92 chr13 117645337 117645544 -2638768 + B3A SINE B2 2 194 -4 2 1482 312 27 0 0 chr13 117646369 117646406 -2637906 + (TC)n Simple_repeat Simple_repeat 1 37 0 2 1482 814 186 0 0 chr13 117647077 117647222 -2637090 + B1_Mus2 SINE Alu 2 146 -1 2 1482 225 0 0 0 chr13 117647226 117647251 -2637061 + (CCA)n Simple_repeat Simple_repeat 1 25 0 2 1482 389 242 62 10 chr13 117648667 117648763 -2635549 + PB1D7 SINE Alu 20 120 0 2 1482 184 220 186 0 chr13 117650163 117650222 -2634090 - MIRb SINE MIR -96 172 103 2 1482 218 318 23 23 chr13 117652501 117652588 -2631724 + L2a LINE L2 3059 3145 -281 2 1482 330 190 93 74 chr13 117654042 117654150 -2630162 - Charlie4z DNA MER1_type -3 164 55 2 1482 693 202 40 92 chr13 117654418 117654669 -2629643 - Lx5 LINE L1 -3 7047 6810 2 1482 549 80 0 0 chr13 117654738 117654813 -2629499 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 2 1482 733 104 35 0 chr13 117657460 117657604 -2626708 + (TA)n Simple_repeat Simple_repeat 2 150 0 2 1482 23 33 0 0 chr13 117659615 117659645 -2624667 + AT_rich Low_complexity Low_complexity 1 30 0 2 1482 2368 264 79 90 chr13 117660736 117661940 -2622372 + Lx9 LINE L1 6451 7641 -3 2 1482 266 0 0 29 chr13 117662560 117662595 -2621717 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 2 1482 1112 116 41 0 chr13 117662595 117662767 -2621545 + B2_Mm1t SINE B2 1 179 -14 2 1482 201 222 56 0 chr13 117662776 117662848 -2621464 + (CAGAG)n Simple_repeat Simple_repeat 2 77 0 2 1482 369 207 120 8 chr13 117662850 117662967 -2621345 + B2_Mm2 SINE B2 47 176 -19 2 1482 254 342 45 9 chr13 117663004 117663116 -2621196 - MIRm SINE MIR -132 144 29 2 1482 224 217 0 0 chr13 117663529 117663575 -2620737 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 2 1482 22 35 0 0 chr13 117664078 117664107 -2620205 + AT_rich Low_complexity Low_complexity 1 29 0 2 1482 474 220 367 0 chr13 117664112 117664262 -2620050 - B3 SINE B2 -11 205 1 2 1482 243 157 0 0 chr13 117664316 117664367 -2619945 + (CA)n Simple_repeat Simple_repeat 2 52 0 2 1482 415 281 31 15 chr13 117664409 117664539 -2619773 + ID_B1 SINE B4 90 221 -3 2 1482 264 149 0 0 chr13 117664539 117664586 -2619726 + (CA)n Simple_repeat Simple_repeat 1 47 0 2 1482 2045 45 0 0 chr13 117664801 117665046 -2619266 + L1Md_F2 LINE L1 6324 6568 -14 2 1482 183 274 150 50 chr13 117666646 117666746 -2617566 - L2b LINE L2 -24 3351 3242 2 1482 343 325 6 52 chr13 117667169 117667315 -2616997 + PB1D10 SINE Alu 11 149 0 2 1482 392 241 0 24 chr13 117667329 117667414 -2616898 + B1_Mur2 SINE Alu 34 116 -33 2 1482 234 0 0 0 chr13 117667420 117667446 -2616866 + (TGGA)n Simple_repeat Simple_repeat 3 28 0 2 1482 207 0 0 0 chr13 117667495 117667518 -2616794 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2 1482 249 33 0 0 chr13 117669489 117669519 -2614793 + (CA)n Simple_repeat Simple_repeat 1 30 0 2 1482 25 65 0 0 chr13 117669535 117669581 -2614731 + AT_rich Low_complexity Low_complexity 1 46 0 2 1482 266 311 56 9 chr13 117670392 117670499 -2613813 + Lx8 LINE L1 6884 6995 -478 2 1482 1791 251 42 25 chr13 117670509 117670980 -2613332 - Lx6 LINE L1 0 7460 6982 2 1482 1184 263 44 0 chr13 117670983 117671325 -2612987 + Lx8 LINE L1 6995 7351 -122 2 1482 225 270 28 62 chr13 117672250 117672331 -2611981 + MIR SINE MIR 114 198 -70 2 1482 195 69 0 0 chr13 117672423 117672452 -2611860 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2 1482 1136 69 0 14 chr13 117672466 117672613 -2611699 - B1_Mus1 SINE Alu 0 148 4 2 1482 1093 67 0 0 chr13 117672854 117672988 -2611324 + B1_Mus2 SINE Alu 2 135 -12 2 1482 180 0 0 0 chr13 117672988 117673008 -2611304 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2 1482 238 26 51 0 chr13 117673009 117673048 -2611264 + (CAA)n Simple_repeat Simple_repeat 2 42 0 2 1482 1140 215 5 0 chr13 117674623 117674842 -2609470 + URR1A DNA MER1_type 7 226 0 2 1482 249 279 53 55 chr13 117675812 117675919 -2608393 + MIRb SINE MIR 11 123 -145 2 1482 198 0 0 0 chr13 117675921 117675943 -2608369 + (CAA)n Simple_repeat Simple_repeat 1 22 0 2 1482 302 372 57 17 chr13 117676174 117676349 -2607963 + L1M4c LINE L1 370 551 -6353 2 1482 282 56 0 0 chr13 117676439 117676475 -2607837 + (TCTG)n Simple_repeat Simple_repeat 4 39 0 2 1482 334 348 56 43 chr13 117676547 117676709 -2607603 + L1M4c LINE L1 863 1026 -5878 2 1482 416 331 23 31 chr13 117676715 117676739 -2607573 + B1F SINE Alu 2 28 -121 2 1482 540 0 0 0 chr13 117676739 117676799 -2607513 + (CAAAA)n Simple_repeat Simple_repeat 2 61 0 2 1482 416 331 23 31 chr13 117676799 117676902 -2607410 + B1F SINE Alu 29 128 -21 2 1482 202 220 0 0 chr13 117676931 117676981 -2607331 + A-rich Low_complexity Low_complexity 1 50 0 2 1482 322 347 73 26 chr13 117676987 117677138 -2607174 + L1M4c LINE L1 1018 1175 -5729 2 1482 677 71 20 0 chr13 117677232 117677331 -2606981 + (GGGA)n Simple_repeat Simple_repeat 1 101 0 2 1482 519 253 312 9 chr13 117677337 117677863 -2606449 + L1M4c LINE L1 1388 2072 -5262 2 1482 382 315 0 18 chr13 117677866 117677979 -2606333 + PB1D7 SINE Alu 10 120 0 2 1482 180 77 0 0 chr13 117677980 117678006 -2606306 + (TAAAA)n Simple_repeat Simple_repeat 5 30 0 2 1482 360 43 0 0 chr13 117678067 117678113 -2606199 + (CA)n Simple_repeat Simple_repeat 1 46 0 2 1482 314 309 70 41 chr13 117678195 117678367 -2605945 + L1M4c LINE L1 2217 2393 -4615 2 1482 299 286 82 75 chr13 117678594 117678753 -2605559 + RSINE1 SINE B4 5 164 -1 2 1482 297 0 0 0 chr13 117678943 117678976 -2605336 + (CA)n Simple_repeat Simple_repeat 2 34 0 2 1482 30 83 0 0 chr13 117678981 117679053 -2605259 + AT_rich Low_complexity Low_complexity 1 72 0 2 1482 30 27 0 0 chr13 117679144 117679181 -2605131 + AT_rich Low_complexity Low_complexity 1 37 0 2 1482 301 266 158 12 chr13 117679859 117680106 -2604206 + L1M4c LINE L1 5122 5404 -1602 2 1482 278 200 161 37 chr13 117680144 117680233 -2604079 - MLT1A0 LTR MaLR -54 354 222 2 1482 426 20 0 0 chr13 117680515 117680566 -2603746 + (GA)n Simple_repeat Simple_repeat 2 52 0 2 1482 290 212 67 50 chr13 117680587 117680706 -2603606 + L1M4c LINE L1 6608 6728 -316 2 1482 836 258 148 21 chr13 117680772 117680941 -2603371 - ORR1D2 LTR MaLR 0 370 180 2 1482 555 16 0 0 chr13 117680941 117681005 -2603307 + (GA)n Simple_repeat Simple_repeat 2 65 0 2 1482 836 258 148 21 chr13 117681005 117681160 -2603152 - ORR1D2 LTR MaLR -191 179 5 2 1482 22 35 0 0 chr13 117682069 117682098 -2602214 + AT_rich Low_complexity Low_complexity 1 29 0 2 1482 24 32 0 0 chr13 117682591 117682622 -2601690 + AT_rich Low_complexity Low_complexity 1 31 0 2 1482 463 233 42 25 chr13 117684711 117684830 -2599482 - B1_Mur1 SINE Alu -24 125 5 2 1482 345 365 56 33 chr13 117687196 117687411 -2596901 + MIR SINE MIR 23 242 -20 2 1482 186 43 0 0 chr13 117688859 117688882 -2595430 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1482 271 266 161 25 chr13 117688967 117689048 -2595264 + RSINE1 SINE B4 2 93 -72 2 1482 311 0 26 0 chr13 117689052 117689091 -2595221 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1482 561 138 0 0 chr13 117689095 117689189 -2595123 + (TAGA)n Simple_repeat Simple_repeat 2 95 0 2 1482 601 277 160 52 chr13 117689203 117689383 -2594929 + L1MA6 LINE L1 5559 5752 -548 2 1482 408 200 129 10 chr13 117689383 117689484 -2594828 + PB1D10 SINE Alu 5 117 0 2 1482 601 277 160 52 chr13 117689484 117689859 -2594453 + L1MA6 LINE L1 5753 6174 -126 2 1482 1543 170 165 9 chr13 117690656 117690995 -2593317 + ORR1B1 LTR MaLR 1 392 -2 2 1482 189 74 0 0 chr13 117691753 117691780 -2592532 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1482 210 171 0 0 chr13 117692075 117692116 -2592196 + (TA)n Simple_repeat Simple_repeat 2 42 0 2 1482 312 312 161 34 chr13 117692409 117692887 -2591425 - L2 LINE L2 -1225 2194 1656 2 1482 221 0 35 0 chr13 117693181 117693210 -2591102 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 2 1482 666 234 109 0 chr13 117693213 117693405 -2590907 + B3 SINE B2 4 216 0 2 1482 2343 70 3 9 chr13 117693541 117693861 -2590451 - L1_Mus2 LINE L1 0 6566 6249 2 1482 600 188 7 7 chr13 117694495 117694640 -2589672 + Lx2B LINE L1 6854 6998 -2 2 1482 393 321 152 50 chr13 117694684 117694925 -2589387 + Lx8 LINE L1 6916 7205 -268 2 1482 1131 123 50 50 chr13 117694925 117695147 -2589165 + URR1A DNA MER1_type 5 226 0 2 1482 393 321 152 50 chr13 117695147 117695264 -2589048 + Lx8 LINE L1 7206 7326 -147 2 1482 411 73 0 0 chr13 117695264 117695319 -2588993 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1482 393 321 152 50 chr13 117695319 117695458 -2588854 + Lx8 LINE L1 7327 7464 -9 2 1482 24 32 0 0 chr13 117695639 117695670 -2588642 + AT_rich Low_complexity Low_complexity 1 31 0 2 1482 684 292 106 54 chr13 117696209 117696709 -2587603 + Lx8 LINE L1 6944 7469 -4 2 1482 24 67 0 0 chr13 117696728 117696773 -2587539 + AT_rich Low_complexity Low_complexity 1 45 0 2 1482 510 135 0 0 chr13 117699089 117699193 -2585119 + (TG)n Simple_repeat Simple_repeat 2 105 0 2 1482 441 0 0 0 chr13 117700428 117700477 -2583835 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1482 2485 53 3 12 chr13 117700719 117701044 -2583268 + L1_Mus2 LINE L1 6245 6566 0 2 1482 1118 89 0 0 chr13 117701290 117701436 -2582876 + B1_Mus2 SINE Alu 1 146 -1 2 1483 413 300 176 65 chr13 117703333 117703370 -2580942 + ORR1D2 LTR MaLR 1 33 -337 2 1483 511 186 150 89 chr13 117703370 117703583 -2580729 + URR1A DNA MER1_type 1 226 0 2 1483 413 300 176 65 chr13 117703583 117703713 -2580599 + ORR1D2 LTR MaLR 34 181 -189 2 1483 513 0 0 0 chr13 117703713 117703770 -2580542 + (TC)n Simple_repeat Simple_repeat 2 58 0 2 1483 413 300 176 65 chr13 117703770 117703879 -2580433 + ORR1D2 LTR MaLR 182 308 -62 2 1483 2118 182 47 15 chr13 117704250 117704658 -2579654 + MTC LTR MaLR 1 421 0 2 1483 693 0 0 0 chr13 117705684 117705761 -2578551 + (GGGA)n Simple_repeat Simple_repeat 3 79 0 2 1483 485 241 52 58 chr13 117705762 117705934 -2578378 + MTD LTR MaLR 197 367 -52 2 1483 324 0 0 0 chr13 117706313 117706349 -2577963 + (TC)n Simple_repeat Simple_repeat 2 37 0 2 1483 252 362 9 9 chr13 117707069 117707175 -2577137 - MLT1I LTR MaLR -274 137 32 2 1483 216 200 0 0 chr13 117707256 117707311 -2577001 + T-rich Low_complexity Low_complexity 1 55 0 2 1483 6004 52 5 0 chr13 117707801 117708547 -2575765 + L1Md_T LINE L1 5833 6582 0 2 1483 285 283 0 78 chr13 117711028 117711143 -2573169 - PB1D10 SINE Alu 0 117 12 2 1483 265 267 19 0 chr13 117714494 117714599 -2569713 + GA-rich Low_complexity Low_complexity 2 108 0 2 1483 981 162 133 25 chr13 117715655 117715858 -2568454 - URR1A DNA MER1_type -1 225 1 3 1483 286 321 24 12 chr13 117716692 117716774 -2567538 + B1F1 SINE Alu 13 95 -54 3 1483 1168 255 107 31 chr13 117716777 117717162 -2567150 + MTD LTR MaLR 5 418 -1 3 1483 2758 31 8 0 chr13 117717319 117717672 -2566640 + L1_Mm LINE L1 4202 4557 -1326 3 1483 216 0 0 0 chr13 117717915 117717939 -2566373 + (TG)n Simple_repeat Simple_repeat 1 24 0 3 1483 462 79 0 0 chr13 117717939 117718002 -2566310 + (TA)n Simple_repeat Simple_repeat 2 64 0 3 1483 3607 121 2 4 chr13 117718112 117718625 -2565687 + MT2B LTR ERVL 5 516 -85 3 1483 548 189 0 16 chr13 117718695 117718819 -2565493 + CT-rich Low_complexity Low_complexity 2 123 0 3 1483 645 280 67 34 chr13 117719003 117719391 -2564921 + L1MA8 LINE L1 5630 6030 -261 3 1483 8477 82 11 8 chr13 117719862 117721865 -2562447 - L1_Mus1 LINE L1 0 6567 4619 3 1483 6559 93 4 0 chr13 117721860 117722762 -2561550 + L1_Mus1 LINE L1 3711 4616 -1267 3 1483 28 48 0 0 chr13 117724286 117724328 -2559984 + AT_rich Low_complexity Low_complexity 1 42 0 3 1483 24 67 0 0 chr13 117724817 117724862 -2559450 + AT_rich Low_complexity Low_complexity 1 45 0 3 1483 1039 187 20 15 chr13 117725412 117725613 -2558699 + B3 SINE B2 5 206 -10 3 1483 216 167 48 0 chr13 117725644 117725686 -2558626 + ID4_ SINE ID 40 83 0 3 1483 27 29 0 0 chr13 117725686 117725720 -2558592 + AT_rich Low_complexity Low_complexity 1 34 0 3 1483 572 231 243 0 chr13 117725725 117725894 -2558418 + B3 SINE B2 1 210 -6 3 1483 26 0 0 0 chr13 117725910 117725936 -2558376 + AT_rich Low_complexity Low_complexity 1 26 0 3 1483 8807 6 0 0 chr13 117726073 117727033 -2557279 + L1Md_T LINE L1 5623 6582 0 3 1483 269 109 22 0 chr13 117727125 117727171 -2557141 + (TG)n Simple_repeat Simple_repeat 2 48 0 3 1483 782 207 14 0 chr13 117727177 117727317 -2556995 - B1_Mur2 SINE Alu -6 143 2 3 1483 25 31 0 0 chr13 117728988 117729020 -2555292 + AT_rich Low_complexity Low_complexity 1 32 0 3 1483 364 302 23 38 chr13 117729767 117729898 -2554414 - ID_B1 SINE B4 -5 219 91 3 1483 180 111 0 0 chr13 117729974 117730001 -2554311 + (A)n Simple_repeat Simple_repeat 1 27 0 3 1483 27 49 0 0 chr13 117731033 117731074 -2553238 + AT_rich Low_complexity Low_complexity 1 41 0 3 1483 944 248 158 9 chr13 117731095 117731417 -2552895 + ORR1D2 LTR MaLR 1 370 0 3 1483 398 275 65 84 chr13 117733037 117733192 -2551120 + RSINE1 SINE B4 11 162 -3 3 1483 739 269 52 24 chr13 117733290 117733503 -2550809 - ID_B1 SINE B4 -3 221 3 3 1483 235 207 69 0 chr13 117733520 117733578 -2550734 + ID_B1 SINE B4 104 165 -59 3 1483 577 171 95 24 chr13 117735802 117735928 -2548384 + B1_Mur2 SINE Alu 1 135 -14 3 1483 315 0 0 0 chr13 117735929 117735964 -2548348 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 3 1483 457 291 120 0 chr13 117736655 117736813 -2547499 + B3A SINE B2 4 180 -18 3 1483 320 270 35 43 chr13 117736918 117737034 -2547278 - RSINE1 SINE B4 -6 159 45 3 1483 393 282 10 0 chr13 117738110 117738213 -2546099 + ID_B1 SINE B4 116 219 -5 3 1483 283 327 76 9 chr13 117738247 117738352 -2545960 + RSINE1 SINE B4 9 120 -45 3 1483 270 0 0 0 chr13 117738353 117738383 -2545929 + (CA)n Simple_repeat Simple_repeat 2 31 0 3 1483 1111 77 0 13 chr13 117738978 117739136 -2545176 - L1_Mus2 LINE L1 -2 6564 6409 3 1483 275 278 0 62 chr13 117740418 117740514 -2543798 + PB1D10 SINE Alu 28 117 0 3 1483 399 21 0 0 chr13 117740641 117740689 -2543623 + (CTTG)n Simple_repeat Simple_repeat 4 51 0 3 1483 237 239 0 0 chr13 117740719 117740765 -2543547 - B1_Mur2 SINE Alu -57 92 47 3 1483 201 74 0 0 chr13 117740793 117740820 -2543492 + (TTG)n Simple_repeat Simple_repeat 1 27 0 3 1483 309 26 0 0 chr13 117741288 117741326 -2542986 + (TG)n Simple_repeat Simple_repeat 1 38 0 3 1483 25 51 0 0 chr13 117741798 117741837 -2542475 + AT_rich Low_complexity Low_complexity 1 39 0 3 1483 255 61 0 0 chr13 117742051 117742084 -2542228 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 3 1483 281 89 0 22 chr13 117742114 117742160 -2542152 + (TG)n Simple_repeat Simple_repeat 1 45 0 3 1483 364 276 9 37 chr13 117742180 117742289 -2542023 - B3A SINE B2 -91 107 2 3 1483 248 131 0 21 chr13 117743045 117743092 -2541220 + G-rich Low_complexity Low_complexity 4 49 0 3 1483 370 296 70 0 chr13 117744794 117744909 -2539403 + B1F SINE Alu 19 141 -8 3 1483 333 0 0 0 chr13 117745509 117745546 -2538766 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 3 1483 343 268 41 0 chr13 117745766 117745863 -2538449 + ID_B1 SINE B4 114 214 -10 3 1483 386 336 0 0 chr13 117745870 117745974 -2538338 + B1F2 SINE Alu 1 104 -45 3 1483 304 226 55 33 chr13 117747164 117747278 -2537034 + B1F SINE Alu 25 149 0 3 1483 253 225 150 0 chr13 117748283 117748302 -2536010 - PB1D9 SINE Alu -11 109 18 3 1483 288 262 0 0 chr13 117748302 117748363 -2535949 - B4 SINE B4 -129 163 103 3 1483 506 225 0 7 chr13 117748372 117748515 -2535797 + (TA)n Simple_repeat Simple_repeat 1 142 0 3 1483 1069 278 71 11 chr13 117748930 117749280 -2535032 + MTE2b LTR MaLR 3 373 -6 3 1483 244 290 21 0 chr13 117749288 117749381 -2534931 - ID_B1 SINE B4 -16 208 114 3 1483 809 251 5 0 chr13 117749733 117749924 -2534388 + B3 SINE B2 7 198 -18 3 1483 224 247 82 0 chr13 117750053 117750066 -2534246 + B4 SINE B4 70 88 -204 3 1483 314 289 31 0 chr13 117750066 117750163 -2534149 + PB1D10 SINE Alu 1 100 -17 3 1483 311 152 7 44 chr13 117750185 117750323 -2533989 + GA-rich Low_complexity Low_complexity 1 132 0 3 1483 299 65 22 0 chr13 117752386 117752432 -2531880 + (TGGGGG)n Simple_repeat Simple_repeat 1 47 0 3 1483 265 19 93 0 chr13 117753721 117753775 -2530537 + (GA)n Simple_repeat Simple_repeat 2 60 0 3 1483 27 0 0 0 chr13 117753858 117753885 -2530427 + AT_rich Low_complexity Low_complexity 1 27 0 3 1483 337 212 162 0 chr13 117753922 117754021 -2530291 - ID_B1 SINE B4 -1 223 109 3 1483 332 170 36 161 chr13 117754021 117754034 -2530278 - PB1D7 SINE Alu -2 118 21 3 1483 213 39 0 0 chr13 117754119 117754145 -2530167 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3 1483 248 284 68 0 chr13 117754172 117754260 -2530052 - PB1D9 SINE Alu 0 120 27 3 1483 21 57 0 0 chr13 117754305 117754340 -2529972 + AT_rich Low_complexity Low_complexity 1 35 0 3 1483 227 203 0 15 chr13 117755351 117755416 -2528896 + GA-rich Low_complexity Low_complexity 4 67 0 3 1483 282 29 0 0 chr13 117755476 117755511 -2528801 + (CA)n Simple_repeat Simple_repeat 1 35 0 3 1483 192 77 0 0 chr13 117756022 117756048 -2528264 + (CG)n Simple_repeat Simple_repeat 2 27 0 3 1483 565 38 25 0 chr13 117756048 117756127 -2528185 + (CA)n Simple_repeat Simple_repeat 1 82 0 3 1483 351 0 0 0 chr13 117758461 117758500 -2525812 + (TG)n Simple_repeat Simple_repeat 2 40 0 3 1483 570 255 128 28 chr13 117758523 117758841 -2525471 - ORR1E LTR MaLR -3 376 1 3 1483 276 276 87 25 chr13 117759246 117759381 -2524931 + B1F1 SINE Alu 6 146 -1 3 1483 696 161 13 0 chr13 117760350 117760483 -2523829 - B1F2 SINE Alu -7 143 5 3 1483 470 275 76 23 chr13 117760557 117760728 -2523584 + B3A SINE B2 3 182 -16 3 1483 315 0 0 0 chr13 117760762 117760797 -2523515 + (CA)n Simple_repeat Simple_repeat 2 36 0 3 1483 725 231 71 10 chr13 117760869 117761066 -2523246 + B3 SINE B2 4 212 -4 3 1483 253 233 165 11 chr13 117761210 117761301 -2523011 - PB1D9 SINE Alu -6 114 10 3 1483 3123 76 74 5 chr13 117761540 117761987 -2522325 - L1_Mus4 LINE L1 0 6636 6159 3 1483 428 306 99 25 chr13 117763169 117763451 -2520861 - MLT1D LTR MaLR -178 327 25 3 1483 410 350 28 0 chr13 117764823 117765000 -2519312 - B3A SINE B2 -16 182 1 3 1483 420 130 0 0 chr13 117765085 117765154 -2519158 + (TG)n Simple_repeat Simple_repeat 2 70 0 3 1483 496 197 28 0 chr13 117765414 117765522 -2518790 + B1F SINE Alu 1 108 -9 3 1483 265 318 91 23 chr13 117765522 117765546 -2518766 + B4 SINE B4 86 226 -66 3 1483 1312 203 25 53 chr13 117765807 117766125 -2518187 + RLTR11A2 LTR ERVK 1 309 -218 3 1483 399 41 0 0 chr13 117766143 117766192 -2518120 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 3 1483 248 226 125 31 chr13 117766339 117766435 -2517877 + PB1D10 SINE Alu 13 117 0 3 1483 408 31 0 0 chr13 117766671 117766724 -2517588 - L1Md_F2 LINE L1 -669 5913 5861 3 1483 5618 51 4 3 chr13 117766724 117767414 -2516898 + L1Md_F2 LINE L1 5892 6582 0 3 1483 224 236 36 0 chr13 117769276 117769331 -2514981 + B1F2 SINE Alu 5 61 -88 3 1483 328 214 0 28 chr13 117769541 117769613 -2514699 - B2_Mm2 SINE B2 -125 70 1 3 1483 906 307 93 56 chr13 117769615 117770118 -2514194 + MT2A LTR ERVL 3 524 -9 3 1483 261 254 169 0 chr13 117770931 117771002 -2513310 + RSINE1 SINE B4 51 133 -32 3 1483 769 232 145 65 chr13 117771074 117771368 -2512944 + RLTR20B3 LTR ERVK 160 471 -106 3 1483 441 0 0 0 chr13 117771368 117771417 -2512895 + (TG)n Simple_repeat Simple_repeat 2 50 0 3 1483 769 232 145 65 chr13 117771417 117771509 -2512803 + RLTR20B3 LTR ERVK 472 576 -1 3 1483 296 164 15 0 chr13 117771511 117771578 -2512734 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 3 1483 704 231 0 7 chr13 117771593 117771741 -2512571 + B1F2 SINE Alu 3 149 0 3 1483 363 253 13 0 chr13 117771765 117771844 -2512468 + PB1D10 SINE Alu 38 117 0 3 1483 868 219 37 37 chr13 117772164 117772378 -2511934 + B3 SINE B2 3 216 0 3 1483 296 296 40 10 chr13 117773415 117773514 -2510798 + ID_B1 SINE B4 78 179 -45 4 1483 413 252 0 26 chr13 117773591 117773705 -2510607 + B1F1 SINE Alu 1 111 -38 4 1483 2423 101 97 16 chr13 117773792 117774227 -2510085 + RMER16 LTR ERVK 64 533 0 4 1483 428 250 79 6 chr13 117774227 117774392 -2509920 - MER33 DNA MER1_type -124 200 24 4 1483 320 317 0 0 chr13 117774479 117774561 -2509751 + PB1D10 SINE Alu 1 82 -35 4 1483 805 219 112 5 chr13 117774559 117774747 -2509565 + B3 SINE B2 7 214 -2 4 1483 474 18 0 0 chr13 117774751 117774806 -2509506 + (TGGA)n Simple_repeat Simple_repeat 4 58 0 4 1483 356 241 8 0 chr13 117775412 117775514 -2508798 + B1F1 SINE Alu 1 104 -13 4 1483 330 26 0 0 chr13 117775514 117775553 -2508759 + (TAAA)n Simple_repeat Simple_repeat 1 39 0 4 1483 307 276 148 7 chr13 117775713 117775855 -2508457 + RSINE1 SINE B4 2 163 -2 4 1483 233 347 46 67 chr13 117776019 117776303 -2508009 + LTR31 LTR ERV1 266 543 -76 4 1483 221 109 0 21 chr13 117776486 117776533 -2507779 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 4 1483 254 212 45 0 chr13 117777220 117777286 -2507026 + MER54A LTR ERVL 825 893 -8 4 1483 338 246 67 42 chr13 117777430 117777549 -2506763 + MER57A-int LTR ERV1 1365 1486 -4701 4 1483 478 133 28 19 chr13 117777887 117777994 -2506318 + CT-rich Low_complexity Low_complexity 3 110 0 4 1483 389 279 38 9 chr13 117778005 117778110 -2506202 - PB1D10 SINE Alu -9 108 1 4 1483 975 273 75 58 chr13 117778192 117778604 -2505708 - MTD LTR MaLR 0 419 1 4 1483 232 154 0 0 chr13 117778604 117778641 -2505671 - ID_B1 SINE B4 -98 126 90 4 1483 1199 45 0 6 chr13 117778711 117778867 -2505445 + L1Md_A LINE L1 6424 6578 -4 4 1483 25 0 0 0 chr13 117778867 117778892 -2505420 + AT_rich Low_complexity Low_complexity 1 25 0 4 1483 451 188 115 0 chr13 117778914 117779010 -2505302 + B1_Mur4 SINE Alu 20 126 -24 4 1483 189 0 0 0 chr13 117779012 117779033 -2505279 + (TG)n Simple_repeat Simple_repeat 1 21 0 4 1483 219 211 20 50 chr13 117779055 117779155 -2505157 + A-rich Low_complexity Low_complexity 2 98 0 4 1483 27 29 0 0 chr13 117780837 117780871 -2503441 + AT_rich Low_complexity Low_complexity 1 34 0 4 1483 232 146 42 0 chr13 117781087 117781135 -2503177 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 4 1483 23 0 0 0 chr13 117781164 117781187 -2503125 + AT_rich Low_complexity Low_complexity 1 23 0 4 1483 457 202 88 0 chr13 117781301 117781415 -2502897 + B1_Mur3 SINE Alu 24 147 -2 4 1483 21 0 0 0 chr13 117782643 117782664 -2501648 + AT_rich Low_complexity Low_complexity 1 21 0 4 1483 249 279 10 61 chr13 117784232 117784331 -2499981 + ID_B1 SINE B4 127 220 -4 4 1483 275 296 0 14 chr13 117784261 117784333 -2499979 + B1F SINE Alu 76 146 -3 4 1483 339 202 57 45 chr13 117784449 117784537 -2499775 + B3A SINE B2 11 99 -99 4 1483 210 71 0 0 chr13 117784864 117784892 -2499420 + (TAA)n Simple_repeat Simple_repeat 3 30 0 4 1483 1148 68 0 14 chr13 117785240 117785388 -2498924 + B1_Mus2 SINE Alu 2 147 0 4 1483 427 299 23 16 chr13 117785662 117785791 -2498521 + RSINE1 SINE B4 3 132 -33 4 1483 288 0 0 0 chr13 117785825 117785857 -2498455 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1483 375 308 0 27 chr13 117786957 117787067 -2497245 - PB1D10 SINE Alu -2 115 9 4 1483 442 254 14 55 chr13 117787547 117787693 -2496619 + B1F SINE Alu 9 148 -1 4 1483 373 235 80 20 chr13 117787850 117787950 -2496362 + PB1D10 SINE Alu 12 117 0 4 1483 287 232 7 82 chr13 117787972 117788089 -2496223 + PB1D10 SINE Alu 1 113 -7 4 1483 872 87 8 0 chr13 117788416 117788543 -2495769 + B1_Mus1 SINE Alu 21 148 0 4 1483 2446 129 59 30 chr13 117788626 117789032 -2495280 - MTC LTR MaLR -3 418 1 4 1483 805 226 56 15 chr13 117789166 117789364 -2494948 - B3 SINE B2 -10 206 1 4 1483 654 79 0 0 chr13 117789565 117789654 -2494658 + (GA)n Simple_repeat Simple_repeat 1 89 0 4 1483 1177 220 5 0 chr13 117790011 117790225 -2494087 + B3 SINE B2 2 216 0 4 1483 222 250 43 29 chr13 117790328 117790398 -2493914 + B1F SINE Alu 74 144 -5 4 1483 324 153 0 157 chr13 117791614 117791824 -2492488 + (CACTA)n Simple_repeat Simple_repeat 1 177 0 4 1483 2910 78 85 30 chr13 117791868 117792410 -2491902 + RMER17A LTR ERVK 1 572 -179 4 1483 235 337 163 0 chr13 117792807 117792899 -2491413 + PB1D10 SINE Alu 3 109 -8 4 1483 213 39 0 0 chr13 117793079 117793105 -2491207 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 4 1483 27 29 0 0 chr13 117793693 117793727 -2490585 + AT_rich Low_complexity Low_complexity 1 34 0 4 1483 240 154 0 0 chr13 117794193 117794232 -2490080 + PB1D10 SINE Alu 67 105 -12 4 1483 243 0 0 0 chr13 117794232 117794259 -2490053 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 4 1483 553 254 22 0 chr13 117794724 117794858 -2489454 + ID_B1 SINE B4 88 224 0 4 1483 416 268 63 38 chr13 117795139 117795298 -2489014 + RSINE1 SINE B4 3 165 0 4 1483 500 314 116 79 chr13 117796273 117796338 -2487974 - B4A SINE B4 -5 287 226 4 1483 413 260 67 72 chr13 117796338 117796533 -2487779 - B3A SINE B2 -2 196 3 4 1483 500 314 116 79 chr13 117796533 117796744 -2487568 - B4A SINE B4 -67 225 1 4 1483 510 17 0 0 chr13 117796764 117796823 -2487489 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 4 1483 243 61 0 0 chr13 117796827 117796860 -2487452 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 4 1483 474 217 69 50 chr13 117796878 117797038 -2487274 + RSINE1 SINE B4 3 165 0 4 1483 336 311 0 32 chr13 117797382 117797505 -2486807 + B1F SINE Alu 31 149 0 4 1483 319 207 261 35 chr13 117797734 117797849 -2486463 + RSINE1 SINE B4 3 143 -22 4 1483 377 90 15 0 chr13 117797850 117797917 -2486395 + (CA)n Simple_repeat Simple_repeat 2 69 0 4 1483 582 114 0 0 chr13 117797917 117798005 -2486307 + (TGGA)n Simple_repeat Simple_repeat 1 88 0 4 1483 24 0 0 0 chr13 117798005 117798029 -2486283 + AT_rich Low_complexity Low_complexity 1 24 0 4 1483 222 37 0 0 chr13 117798272 117798299 -2486013 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 4 1483 466 133 22 0 chr13 117798582 117798672 -2485640 + GA-rich Low_complexity Low_complexity 2 93 0 4 1483 251 189 68 0 chr13 117798853 117798927 -2485385 + (GTTTG)n Simple_repeat Simple_repeat 2 80 0 4 1483 317 250 124 10 chr13 117799227 117799324 -2484988 - PB1D7 SINE Alu 0 120 13 4 1483 360 0 0 0 chr13 117799533 117799573 -2484739 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1483 303 49 0 0 chr13 117799573 117799614 -2484698 + (GA)n Simple_repeat Simple_repeat 1 41 0 4 1483 182 207 17 0 chr13 117799639 117799697 -2484615 + CT-rich Low_complexity Low_complexity 4 62 0 4 1483 549 231 20 47 chr13 117799697 117799847 -2484465 - ID_B1 SINE B4 0 224 79 4 1483 225 284 24 57 chr13 117799917 117800040 -2484272 + PB1D7 SINE Alu 1 119 -1 4 1483 22 0 0 0 chr13 117800369 117800391 -2483921 + AT_rich Low_complexity Low_complexity 1 22 0 4 1483 969 203 10 29 chr13 117800432 117800640 -2483672 + B3 SINE B2 1 204 -12 4 1483 865 238 111 75 chr13 117801395 117801771 -2482541 + MTE2a LTR MaLR 9 376 -3 4 1483 270 0 0 0 chr13 117801771 117801801 -2482511 + (TG)n Simple_repeat Simple_repeat 2 31 0 4 1483 558 0 0 0 chr13 117802275 117802337 -2481975 + (GTTTG)n Simple_repeat Simple_repeat 2 63 0 4 1483 25 0 0 0 chr13 117803110 117803135 -2481177 + AT_rich Low_complexity Low_complexity 1 25 0 4 1483 252 0 0 0 chr13 117803501 117803529 -2480783 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 4 1483 284 265 46 56 chr13 117803530 117803638 -2480674 - B1F SINE Alu -14 135 29 4 1483 239 229 16 0 chr13 117803885 117803946 -2480366 - BC1_Mm scRNA scRNA -77 75 14 4 1483 345 274 200 8 chr13 117804529 117804654 -2479658 + B1F SINE Alu 1 149 0 4 1483 27 0 0 0 chr13 117804654 117804681 -2479631 + AT_rich Low_complexity Low_complexity 1 27 0 4 1483 295 269 114 75 chr13 117805099 117805380 -2478932 + B4 SINE B4 1 292 0 4 1483 237 308 136 55 chr13 117805464 117805574 -2478738 + PB1D9 SINE Alu 2 120 0 4 1483 369 269 8 0 chr13 117806467 117806573 -2477739 - B1F2 SINE Alu -11 109 1 4 1483 689 255 0 41 chr13 117807080 117807252 -2477060 + RSINE1 SINE B4 1 165 0 4 1483 182 174 22 0 chr13 117807522 117807568 -2476744 + (CA)n Simple_repeat Simple_repeat 1 47 0 4 1483 346 316 123 36 chr13 117807905 117808125 -2476187 + Tigger5 DNA MER2_type 1 239 -2167 4 1483 255 319 70 9 chr13 117808893 117809007 -2475305 + B1F SINE Alu 12 132 -17 4 1483 24 0 0 0 chr13 117809153 117809177 -2475135 + AT_rich Low_complexity Low_complexity 1 24 0 4 1483 189 0 0 0 chr13 117809379 117809400 -2474912 + (CAAGT)n Simple_repeat Simple_repeat 2 22 0 4 1483 216 265 0 0 chr13 117809400 117809449 -2474863 - RSINE1 SINE B4 -114 51 3 4 1483 430 277 46 0 chr13 117810786 117810916 -2473396 + B1F2 SINE Alu 6 141 -8 4 1483 356 227 11 43 chr13 117811523 117811596 -2472716 + PB1D7 SINE Alu 27 100 -20 4 1483 270 0 0 0 chr13 117811596 117811626 -2472686 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1483 356 227 11 43 chr13 117811626 117811644 -2472668 + PB1D7 SINE Alu 101 115 -5 4 1483 225 0 0 0 chr13 117813543 117813568 -2470744 + (CAGCG)n Simple_repeat Simple_repeat 5 29 0 4 1483 300 27 0 0 chr13 117814228 117814265 -2470047 + (GGA)n Simple_repeat Simple_repeat 2 38 0 4 1483 21 0 0 0 chr13 117814564 117814585 -2469727 + GC_rich Low_complexity Low_complexity 1 21 0 4 1483 198 0 0 0 chr13 117815100 117815122 -2469190 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 5 1483 407 127 0 53 chr13 117817432 117817507 -2466805 - B1_Mur1 SINE Alu 0 149 79 5 1483 221 58 77 0 chr13 117817546 117817598 -2466714 + (TTG)n Simple_repeat Simple_repeat 2 57 0 5 1483 181 232 0 44 chr13 117817664 117817709 -2466603 + L4 LINE RTE 1015 1057 -972 5 1483 507 69 0 0 chr13 117817782 117817854 -2466458 + (TG)n Simple_repeat Simple_repeat 2 73 0 5 1483 556 241 14 14 chr13 117817977 117818120 -2466192 - B3A SINE B2 -55 143 1 5 1483 546 231 33 47 chr13 117819224 117819374 -2464938 + B1F SINE Alu 1 148 -1 5 1483 505 298 13 7 chr13 117819947 117820099 -2464213 + MER63B DNA AcHobo 273 425 -11 5 1483 585 266 0 0 chr13 117820923 117821047 -2463265 + RSINE1 SINE B4 14 137 -28 5 1483 405 310 9 9 chr13 117821122 117821236 -2463076 + ID_B1 SINE B4 104 217 -7 5 1483 252 0 0 0 chr13 117821299 117821327 -2462985 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 5 1483 333 0 0 0 chr13 117822338 117822375 -2461937 + (CA)n Simple_repeat Simple_repeat 1 37 0 5 1483 360 300 0 52 chr13 117822810 117822926 -2461386 - ID_B1 SINE B4 -34 190 81 5 1483 387 235 0 0 chr13 117823098 117823179 -2461133 - B1F SINE Alu -11 138 58 5 1483 709 217 99 84 chr13 117823180 117823371 -2460941 + B3A SINE B2 2 195 0 5 1483 22 0 0 0 chr13 117823585 117823607 -2460705 + AT_rich Low_complexity Low_complexity 1 22 0 5 1483 431 229 8 0 chr13 117823804 117823922 -2460390 + GA-rich Low_complexity Low_complexity 1 119 0 5 1483 688 154 0 0 chr13 117824575 117824685 -2459627 - B1_Mus2 SINE Alu -16 131 22 5 1483 309 246 0 0 chr13 117824758 117824827 -2459485 - ID4 SINE ID -14 69 1 5 1483 384 22 0 0 chr13 117825602 117825647 -2458665 + (TC)n Simple_repeat Simple_repeat 2 46 0 5 1483 216 67 0 0 chr13 117825647 117825677 -2458635 + (TTAG)n Simple_repeat Simple_repeat 3 32 0 5 1483 1101 88 0 0 chr13 117825679 117825826 -2458486 - B1_Mus1 SINE Alu 0 148 2 5 1483 405 39 0 0 chr13 117825865 117825916 -2458396 + (TG)n Simple_repeat Simple_repeat 2 52 0 5 1483 437 183 10 41 chr13 117825956 117826053 -2458259 - URR1B DNA MER1_type -26 199 106 5 1483 3281 62 80 24 chr13 117826053 117826503 -2457809 - MT2_Mm LTR ERVL 0 475 1 5 1483 321 0 0 0 chr13 117826503 117826541 -2457771 - MERVL-int LTR ERVL 0 5485 5448 5 1483 231 96 36 71 chr13 117826541 117826597 -2457715 - ORR1A3-int LTR MaLR -1323 640 587 5 1483 14543 52 10 1 chr13 117826597 117828675 -2455637 - MERVL-int LTR ERVL -3524 2237 1 5 1483 4113 39 12 14 chr13 117828675 117829169 -2455143 - MT2_Mm LTR ERVL 0 493 1 5 1483 288 130 0 0 chr13 117829171 117829217 -2455095 - URR1B DNA MER1_type -117 108 63 5 1483 687 168 16 0 chr13 117829224 117829349 -2454963 - ORR1A3 LTR MaLR -199 127 1 5 1483 21 0 0 0 chr13 117829374 117829395 -2454917 + AT_rich Low_complexity Low_complexity 1 21 0 5 1483 474 255 107 20 chr13 117829395 117829591 -2454721 - B3 SINE B2 -1 215 3 5 1483 247 342 52 35 chr13 117829818 117829933 -2454379 - PB1D10 SINE Alu 0 117 1 5 1483 269 235 107 36 chr13 117830236 117830320 -2453992 - PB1D10 SINE Alu 0 117 28 5 1483 180 0 0 0 chr13 117830320 117830340 -2453972 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1483 430 221 70 9 chr13 117830363 117830477 -2453835 + B3 SINE B2 5 125 -91 5 1483 1415 185 72 22 chr13 117830682 117831002 -2453310 - Lx7 LINE L1 -5 7691 7356 5 1483 3195 56 5 2 chr13 117831020 117831415 -2452897 - MTA_Mm LTR MaLR 0 396 1 5 1483 7069 79 23 3 chr13 117831415 117832463 -2451849 - MTA_Mm-int LTR MaLR 0 1098 30 5 1483 6295 212 69 15 chr13 117832464 117833123 -2451189 - Lx7 LINE L1 -1192 6504 5819 5 1483 450 0 0 0 chr13 117833123 117833173 -2451139 + (TC)n Simple_repeat Simple_repeat 1 50 0 5 185 6295 161 58 30 chr13 117833173 117834481 -2449831 - Lx7 LINE L1 -62 5818 4482 5 1484 241 113 36 36 chr13 117834485 117834540 -2449772 - RLTR15 LTR ERVK -21 338 284 5 1484 22 0 0 0 chr13 117834543 117834565 -2449747 + AT_rich Low_complexity Low_complexity 1 22 0 5 1484 590 288 0 61 chr13 117834767 117834915 -2449397 - RSINE1 SINE B4 0 165 27 5 1484 1531 67 0 5 chr13 117834977 117835186 -2449126 - L1_Mus2 LINE L1 -150 6416 6209 5 1484 375 308 91 8 chr13 117835355 117835459 -2448853 - B1F1 SINE Alu -17 132 19 5 1484 504 0 0 0 chr13 117835459 117835515 -2448797 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1484 375 308 91 8 chr13 117835515 117835531 -2448781 - B1F1 SINE Alu -131 18 3 5 1484 198 0 0 0 chr13 117836306 117836328 -2447984 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 5 1484 259 394 0 28 chr13 117836328 117836435 -2447877 - PB1D10 SINE Alu -12 105 2 5 1484 435 52 0 0 chr13 117837050 117837108 -2447204 + (TC)n Simple_repeat Simple_repeat 1 58 0 5 1484 207 0 0 0 chr13 117837108 117837131 -2447181 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1484 634 277 14 21 chr13 117837132 117837276 -2447036 - RSINE1 SINE B4 -20 145 3 5 1484 552 362 55 85 chr13 117837286 117837814 -2446498 - MLT1N2 LTR MaLR -14 548 37 5 1484 451 336 8 0 chr13 117837978 117838106 -2446206 + ID_B1 SINE B4 88 216 -8 5 1484 465 171 0 0 chr13 117838414 117838502 -2445810 + GA-rich Low_complexity Low_complexity 2 89 0 5 1484 630 273 7 14 chr13 117838516 117838661 -2445651 + RSINE1 SINE B4 9 152 -13 5 1484 239 216 19 38 chr13 117838753 117838806 -2445506 - ID_B1 SINE B4 -91 133 82 5 1484 629 114 0 9 chr13 117838811 117838926 -2445386 + (TC)n Simple_repeat Simple_repeat 2 115 0 5 1484 180 0 0 0 chr13 117838926 117838946 -2445366 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 1484 483 18 0 0 chr13 117839957 117840013 -2444299 + (GA)n Simple_repeat Simple_repeat 1 56 0 5 1484 643 266 75 57 chr13 117840619 117840898 -2443414 + B4A SINE B4 3 286 -6 5 1484 429 301 0 17 chr13 117841134 117841249 -2443063 + PB1D7 SINE Alu 3 115 -5 5 1484 331 336 127 41 chr13 117841487 117841801 -2442511 - MLT1L LTR MaLR -118 492 152 5 1484 828 30 0 0 chr13 117842237 117842336 -2441976 + (GAA)n Simple_repeat Simple_repeat 1 99 0 5 1484 618 82 0 0 chr13 117842336 117842421 -2441891 + (CAA)n Simple_repeat Simple_repeat 1 85 0 5 1484 439 321 22 7 chr13 117842667 117842802 -2441510 + B1F SINE Alu 5 141 -8 5 1484 238 406 0 0 chr13 117842850 117842919 -2441393 + RSINE1 SINE B4 88 156 -9 5 1484 180 0 0 0 chr13 117842949 117842969 -2441343 + (CA)n Simple_repeat Simple_repeat 1 20 0 5 1484 778 251 31 0 chr13 117843149 117843344 -2440968 - B3 SINE B2 -11 205 5 5 1484 180 0 0 0 chr13 117843368 117843388 -2440924 + (TTG)n Simple_repeat Simple_repeat 2 21 0 5 1484 561 88 0 0 chr13 117843721 117843801 -2440511 + (CA)n Simple_repeat Simple_repeat 2 81 0 5 1484 3417 122 97 21 chr13 117844289 117844858 -2439454 - Lx LINE L1 0 6654 6043 5 1484 219 69 0 0 chr13 117844917 117844946 -2439366 + (CTCTG)n Simple_repeat Simple_repeat 3 31 0 5 1484 252 0 0 0 chr13 117845105 117845133 -2439179 + (A)n Simple_repeat Simple_repeat 1 28 0 5 1484 324 271 14 54 chr13 117846224 117846298 -2438014 + RSINE1 SINE B4 95 165 0 5 1484 381 338 77 45 chr13 117846428 117846462 -2437850 - RSINE1 SINE B4 -3 162 132 5 1484 288 0 0 0 chr13 117846462 117846494 -2437818 + (TG)n Simple_repeat Simple_repeat 2 33 0 5 1484 381 338 77 45 chr13 117846494 117846614 -2437698 - RSINE1 SINE B4 -34 131 3 5 1484 1221 206 43 8 chr13 117846823 117847077 -2437235 + ORR1D1 LTR MaLR 2 264 -110 5 1484 762 41 10 0 chr13 117847079 117847176 -2437136 + B1_Mus2 SINE Alu 50 147 0 5 1484 195 42 0 0 chr13 117847179 117847203 -2437109 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5 1484 489 146 52 0 chr13 117847230 117847326 -2436986 + ORR1D1 LTR MaLR 284 384 0 5 1484 1175 56 7 0 chr13 117847723 117847867 -2436445 + B1_Mus1 SINE Alu 4 148 0 5 1484 183 42 0 0 chr13 117847870 117847894 -2436418 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 5 1484 329 319 104 87 chr13 117847897 117848299 -2436013 + L1M5 LINE L1 3571 3979 -2167 5 1484 519 338 155 72 chr13 117848304 117848737 -2435575 - LTR33A LTR ERVL -8 512 44 5 1484 248 310 0 40 chr13 117849128 117849202 -2435110 + ID2 SINE ID 6 76 -7 5 1484 468 0 0 0 chr13 117849203 117849255 -2435057 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 5 1484 722 215 111 21 chr13 117849427 117849617 -2434695 - B3 SINE B2 -9 207 1 5 1484 755 278 47 0 chr13 117850053 117850222 -2434090 + B3 SINE B2 2 178 -38 5 1484 262 257 0 54 chr13 117850220 117850294 -2434018 + MER5B DNA MER1_type 11 80 -98 5 1484 1191 99 24 29 chr13 117850692 117850899 -2433413 + Lx LINE L1 6449 6654 0 5 1484 424 321 0 9 chr13 117850906 117851016 -2433296 + RSINE1 SINE B4 28 136 -29 5 1484 228 273 47 57 chr13 117851089 117851199 -2433113 + PB1D7 SINE Alu 14 120 0 5 1484 449 315 27 36 chr13 117851208 117851429 -2432883 + ID_B1 SINE B4 4 222 -2 5 1484 24 0 0 0 chr13 117851435 117851459 -2432853 + AT_rich Low_complexity Low_complexity 1 24 0 5 1484 219 139 0 0 chr13 117852288 117852324 -2431988 + (A)n Simple_repeat Simple_repeat 1 36 0 5 1484 204 245 0 0 chr13 117852617 117852670 -2431642 + CT-rich Low_complexity Low_complexity 2 54 0 5 1484 267 327 19 84 chr13 117852673 117852780 -2431532 - PB1D10 SINE Alu -1 116 17 5 1484 717 88 0 0 chr13 117853123 117853225 -2431087 + (TCC)n Simple_repeat Simple_repeat 2 103 0 5 1484 819 85 0 0 chr13 117853245 117853375 -2430937 + (TC)n Simple_repeat Simple_repeat 1 130 0 5 1484 236 158 0 0 chr13 117853404 117853442 -2430870 - B1_Mus2 SINE Alu -109 38 1 5 1484 317 307 8 81 chr13 117853880 117854004 -2430308 - ID_B1 SINE B4 0 224 110 5 1484 510 271 69 28 chr13 117854046 117854190 -2430122 - B3A SINE B2 -47 151 2 5 1484 502 265 25 75 chr13 117854190 117854349 -2429963 - ID_B1 SINE B4 -67 157 7 5 1484 224 216 0 38 chr13 117854524 117854577 -2429735 + (TATG)n Simple_repeat Simple_repeat 4 54 0 5 1484 264 329 116 52 chr13 117854596 117854769 -2429543 - B4 SINE B4 0 292 109 5 1484 1399 216 97 26 chr13 117854790 117855132 -2429180 - ORR1D1 LTR MaLR -8 366 1 6 1484 318 296 0 12 chr13 117855132 117855213 -2429099 - B4A SINE B4 -212 80 1 5 1484 667 233 25 156 chr13 117855234 117855326 -2428986 - B4 SINE B4 0 292 105 6 1484 806 124 42 35 chr13 117855326 117855468 -2428844 - B1_Mur3 SINE Alu -1 148 6 6 1484 261 0 0 0 chr13 117855578 117855607 -2428705 + (TTG)n Simple_repeat Simple_repeat 2 30 0 6 1484 524 336 32 23 chr13 117856060 117856279 -2428033 - MLT1A0 LTR MaLR -1 364 144 6 1484 239 157 20 0 chr13 117856280 117856331 -2427981 + (TA)n Simple_repeat Simple_repeat 2 53 0 6 1484 552 279 56 62 chr13 117856354 117856549 -2427763 + B3A SINE B2 3 196 -2 6 1484 338 330 9 55 chr13 117856571 117856680 -2427632 - B3A SINE B2 -89 109 6 6 1484 377 326 29 14 chr13 117856702 117856842 -2427470 - MLT1A0 LTR MaLR -223 142 1 6 1484 491 290 54 10 chr13 117856907 117857054 -2427258 - ID_B1 SINE B4 -48 244 91 6 1484 254 333 26 70 chr13 117857283 117857512 -2426800 - MIR SINE MIR -32 230 12 6 1484 347 333 30 8 chr13 117858177 117858310 -2426002 + B1F1 SINE Alu 5 140 -9 6 1484 585 299 22 15 chr13 117858450 117858586 -2425726 + RSINE1 SINE B4 21 157 -8 6 1484 26 64 0 0 chr13 117858968 117859015 -2425297 + AT_rich Low_complexity Low_complexity 1 47 0 6 1484 648 258 21 58 chr13 117859044 117859233 -2425079 - B3A SINE B2 -16 182 1 6 1484 30 77 0 0 chr13 117859312 117859377 -2424935 + AT_rich Low_complexity Low_complexity 1 65 0 6 1484 31 26 0 0 chr13 117859404 117859442 -2424870 + AT_rich Low_complexity Low_complexity 1 38 0 6 1484 188 67 33 0 chr13 117860717 117860747 -2423565 + (TA)n Simple_repeat Simple_repeat 2 32 0 6 1484 1336 209 131 9 chr13 117861188 117861517 -2422795 + ORR1D2 LTR MaLR 2 370 0 6 1484 856 274 50 5 chr13 117861642 117861844 -2422468 - ID_B1 SINE B4 -4 220 10 6 1484 230 308 0 84 chr13 117862704 117862775 -2421537 - ID4 SINE ID -2 81 17 6 1484 180 0 0 0 chr13 117863575 117863595 -2420717 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1484 452 308 27 47 chr13 117863881 117864031 -2420281 + ID_B1 SINE B4 66 212 -12 6 1484 304 269 43 99 chr13 117864033 117864194 -2420118 - URR1B DNA MER1_type -3 222 71 6 1484 690 247 7 0 chr13 117864248 117864394 -2419918 + B1_Mur3 SINE Alu 2 148 -1 6 1484 277 299 32 53 chr13 117864426 117864523 -2419789 + PB1D10 SINE Alu 13 106 -11 6 1484 423 0 0 0 chr13 117864523 117864570 -2419742 + (CAAAA)n Simple_repeat Simple_repeat 2 48 0 6 1484 277 297 31 52 chr13 117864570 117864583 -2419729 + PB1D10 SINE Alu 107 117 0 6 1484 230 159 23 0 chr13 117865606 117865650 -2418662 + (CTTTG)n Simple_repeat Simple_repeat 5 49 0 6 1484 624 214 76 8 chr13 117865650 117865782 -2418530 - B1_Mur4 SINE Alu -8 142 2 6 1484 26 0 0 0 chr13 117865975 117866001 -2418311 + AT_rich Low_complexity Low_complexity 1 26 0 6 1484 609 254 14 0 chr13 117866547 117866685 -2417627 - B1F1 SINE Alu -6 143 4 6 1484 350 393 7 14 chr13 117867019 117867161 -2417151 + B1F1 SINE Alu 1 141 -8 6 1484 914 144 0 22 chr13 117867165 117867349 -2416963 + GA-rich Low_complexity Low_complexity 1 180 0 6 1484 2008 147 88 0 chr13 117867382 117867736 -2416576 + ORR1B1 LTR MaLR 1 385 -9 6 1484 453 244 59 45 chr13 117868859 117869066 -2415246 - ORR1E LTR MaLR 0 379 164 6 1484 694 215 33 7 chr13 117869108 117869258 -2415054 - ORR1E LTR MaLR -171 188 35 6 1484 1346 120 12 29 chr13 117869450 117869690 -2414622 - L1_Mm LINE L1 -2188 3695 3460 6 1484 6734 57 3 13 chr13 117869688 117870586 -2413726 + L1_Mus1 LINE L1 5677 6565 -2 6 1484 270 111 0 0 chr13 117870719 117870755 -2413557 + MT2C_Mm LTR ERVL 205 240 -235 6 1484 694 215 0 0 chr13 117870725 117870846 -2413466 + B1_Mus2 SINE Alu 6 126 -21 6 1484 198 0 0 0 chr13 117871253 117871275 -2413037 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 6 1484 1105 76 0 14 chr13 117871279 117871425 -2412887 - B1_Mm SINE Alu 0 147 4 6 1484 668 131 117 0 chr13 117872335 117872455 -2411857 + B1_Mus1 SINE Alu 8 148 0 6 1484 209 259 103 0 chr13 117872597 117872655 -2411657 + L3 LINE CR1 762 825 -3664 6 1484 671 136 17 0 chr13 117873104 117873222 -2411090 + CT-rich Low_complexity Low_complexity 2 121 0 6 1484 21 36 0 0 chr13 117873327 117873355 -2410957 + AT_rich Low_complexity Low_complexity 1 28 0 6 1484 573 263 44 0 chr13 117873388 117873525 -2410787 - RSINE1 SINE B4 -22 143 1 6 1484 809 164 8 0 chr13 117875652 117875799 -2408513 + B1_Mur3 SINE Alu 3 150 0 6 1484 299 99 36 36 chr13 117875800 117875884 -2408428 + A-rich Low_complexity Low_complexity 1 84 0 6 1484 1942 193 20 15 chr13 117876040 117876321 -2407991 - MTB_Mm LTR MaLR 0 407 126 6 1484 927 92 0 0 chr13 117876321 117876452 -2407860 + (CA)n Simple_repeat Simple_repeat 1 131 0 6 1484 1942 193 20 15 chr13 117876452 117876575 -2407737 - MTB_Mm LTR MaLR -282 125 2 6 1484 1319 240 201 13 chr13 117876625 117877072 -2407240 - MT2A LTR ERVL -2 531 1 6 1484 513 0 0 0 chr13 117877106 117877163 -2407149 + (TC)n Simple_repeat Simple_repeat 1 57 0 6 1484 285 277 129 51 chr13 117878485 117878654 -2405658 + RLTR20D LTR ERVK 61 261 -267 6 1484 346 305 34 0 chr13 117878797 117878899 -2405413 + PB1D7 SINE Alu 9 114 -6 6 1484 576 252 19 75 chr13 117879329 117879500 -2404812 + B1F2 SINE Alu 9 311 0 6 1484 231 300 33 0 chr13 117879669 117879729 -2404583 + tRNA-Ala-GCY_ tRNA tRNA 2 63 -12 6 1484 650 175 50 28 chr13 117879943 117880075 -2404237 + B1_Mus1 SINE Alu 5 139 -9 6 1484 330 26 0 0 chr13 117880075 117880114 -2404198 + (CAAAC)n Simple_repeat Simple_repeat 2 40 0 6 1484 480 275 0 0 chr13 117881552 117881661 -2402651 + PB1D7 SINE Alu 1 109 -11 6 1484 344 113 32 0 chr13 117881661 117881723 -2402589 + (GGGAGA)n Simple_repeat Simple_repeat 5 68 0 6 1484 535 184 0 10 chr13 117881731 117881830 -2402482 + B3 SINE B2 32 129 -87 6 1484 351 65 0 0 chr13 117881871 117881917 -2402395 + (GA)n Simple_repeat Simple_repeat 1 46 0 6 1484 341 238 18 6 chr13 117882475 117882640 -2401672 + CT-rich Low_complexity Low_complexity 2 168 0 6 1484 27 0 0 0 chr13 117882666 117882693 -2401619 + AT_rich Low_complexity Low_complexity 1 27 0 6 1484 430 333 44 0 chr13 117882748 117882883 -2401429 - ID_B1 SINE B4 -2 222 82 6 1484 679 252 0 0 chr13 117883118 117883253 -2401059 + ID_B1 SINE B4 82 216 -8 6 1484 2249 160 49 10 chr13 117883645 117884050 -2400262 - MTC LTR MaLR 0 421 1 6 1484 261 0 0 0 chr13 117884231 117884260 -2400052 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 6 1484 221 371 68 8 chr13 117885825 117885861 -2398451 + B4 SINE B4 63 186 -106 6 1484 366 247 37 0 chr13 117885861 117885942 -2398370 + B1F2 SINE Alu 14 97 -52 6 1484 212 217 0 21 chr13 117885959 117886006 -2398306 + A-rich Low_complexity Low_complexity 3 48 0 6 1484 22 35 0 0 chr13 117886175 117886204 -2398108 + AT_rich Low_complexity Low_complexity 1 29 0 6 1484 664 221 52 42 chr13 117886387 117886571 -2397741 - MTD LTR MaLR 0 419 203 6 1484 281 93 0 0 chr13 117886627 117886670 -2397642 - RMER19C LTR ERVK 0 611 569 6 1484 254 75 0 48 chr13 117886701 117886713 -2397599 - B1_Mur4 SINE Alu -1 149 139 6 1484 423 0 0 0 chr13 117886713 117886760 -2397552 + (TTTTG)n Simple_repeat Simple_repeat 3 49 0 6 1484 254 75 0 48 chr13 117886760 117886789 -2397523 - B1_Mur4 SINE Alu -12 138 110 6 1484 1624 216 54 174 chr13 117886796 117887423 -2396889 - RMER19C LTR ERVK -59 552 1 6 1484 528 335 61 27 chr13 117887440 117887658 -2396654 - MTD LTR MaLR -206 213 18 6 1484 426 259 0 0 chr13 117887695 117887776 -2396536 - ID4_ SINE ID -1 82 2 6 1484 180 0 0 0 chr13 117888172 117888192 -2396120 + (A)n Simple_repeat Simple_repeat 1 20 0 6 1484 1884 146 6 10 chr13 117888465 117888777 -2395535 - RLTR10E LTR ERVK 0 311 1 6 1484 331 317 105 8 chr13 117889532 117889656 -2394656 - MER5B DNA MER1_type -41 137 2 6 1484 1321 62 0 27 chr13 117889686 117889869 -2394443 - L1_Mus2 LINE L1 -1 6565 6388 6 1484 477 43 0 28 chr13 117890074 117890145 -2394167 + L1Md_T LINE L1 6514 6582 0 6 1484 267 146 0 0 chr13 117890168 117890223 -2394089 + (A)n Simple_repeat Simple_repeat 1 55 0 6 1484 189 0 0 0 chr13 117890236 117890257 -2394055 + (A)n Simple_repeat Simple_repeat 1 21 0 6 1484 408 20 0 0 chr13 117891793 117891842 -2392470 + (TG)n Simple_repeat Simple_repeat 1 49 0 6 1484 515 29 14 0 chr13 117892518 117892587 -2391725 + (TG)n Simple_repeat Simple_repeat 2 71 0 6 1484 359 322 74 94 chr13 117892908 117893206 -2391106 + MLT1A LTR MaLR 5 296 -78 6 1484 215 312 24 48 chr13 117894688 117894772 -2389540 - BC1_Mm scRNA scRNA -49 103 22 6 1484 293 139 92 9 chr13 117895091 117895200 -2389112 + (TA)n Simple_repeat Simple_repeat 1 118 0 6 1484 314 221 15 52 chr13 117895270 117895404 -2388908 + (TATATG)n Simple_repeat Simple_repeat 4 132 0 6 1484 606 357 28 28 chr13 117896297 117896582 -2387730 - B4A SINE B4 0 292 8 6 1484 319 220 137 30 chr13 117896743 117896874 -2387438 + L1MB8 LINE L1 6001 6145 -33 6 1484 1985 197 40 2 chr13 117896921 117897318 -2386994 - MTD LTR MaLR -7 412 1 6 1484 431 309 161 30 chr13 117897656 117898023 -2386289 + L1ME2 LINE L1 5497 5911 -253 6 1484 1141 274 71 40 chr13 117898058 117898242 -2386070 - ORR1D2 LTR MaLR -6 364 160 6 1484 207 0 0 0 chr13 117898242 117898265 -2386047 + (CAGA)n Simple_repeat Simple_repeat 2 24 0 6 1484 1141 274 71 40 chr13 117898265 117898433 -2385879 - ORR1D2 LTR MaLR -211 159 1 6 1484 2153 212 24 0 chr13 117899434 117899845 -2384467 - MTC LTR MaLR 0 421 1 6 1484 2002 140 51 20 chr13 117900483 117900834 -2383478 + RLTR28 LTR ERVL 1 362 -162 6 1484 261 295 13 13 chr13 117900829 117900908 -2383404 - B3A SINE B2 -117 81 3 6 1484 6878 52 1 0 chr13 117901557 117902452 -2381860 + L1Md_F2 LINE L1 4690 5585 -298 6 1484 7758 57 2 16 chr13 117902453 117903461 -2380851 + L1Md_F2 LINE L1 5587 6580 -2 6 1484 1663 109 46 32 chr13 117904998 117905281 -2379031 - Lx LINE L1 -12 6642 6356 6 1484 2353 119 40 0 chr13 117905281 117905652 -2378660 + Lx LINE L1 5931 6316 -338 6 1484 1688 225 120 22 chr13 117905736 117906180 -2378132 + RMER19C LTR ERVK 138 611 0 6 1484 21 57 0 0 chr13 117906558 117906593 -2377719 + AT_rich Low_complexity Low_complexity 1 35 0 7 1484 223 28 56 0 chr13 117906716 117906752 -2377560 + (CA)n Simple_repeat Simple_repeat 1 38 0 7 1484 407 391 84 29 chr13 117907156 117907572 -2376740 + LTR16C LTR ERVL 42 480 -9 7 1484 22 94 0 0 chr13 117907726 117907790 -2376522 + AT_rich Low_complexity Low_complexity 1 64 0 7 1484 188 0 74 0 chr13 117908196 117908223 -2376089 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 7 1484 3760 154 42 30 chr13 117908872 117909579 -2374733 + RMER6D LTR ERVK 1 716 -4 7 1484 3031 83 5 0 chr13 117910012 117910410 -2373902 - MTB LTR MaLR 0 400 1 7 1484 22 56 0 0 chr13 117910448 117910484 -2373828 + AT_rich Low_complexity Low_complexity 1 36 0 7 1484 3151 61 39 7 chr13 117910484 117910916 -2373396 - L1Md_F2 LINE L1 -3 6579 6134 7 1484 489 136 0 0 chr13 117910911 117911014 -2373298 + L1Md_F3 LINE L1 6480 6582 -2 7 1484 3208 54 0 2 chr13 117911028 117911454 -2372858 + L1Md_F2 LINE L1 5162 5586 -297 7 1484 7717 58 3 4 chr13 117911454 117912432 -2371880 + L1Md_F2 LINE L1 5587 6563 -19 7 1484 396 0 0 0 chr13 117912509 117912553 -2371759 + (CA)n Simple_repeat Simple_repeat 1 44 0 7 1484 28 91 0 0 chr13 117912568 117912645 -2371667 + AT_rich Low_complexity Low_complexity 1 77 0 7 1484 1143 69 119 23 chr13 117913769 117913946 -2370366 + B2_Mm2 SINE B2 2 195 0 7 1484 701 295 71 93 chr13 117914738 117915018 -2369294 + B4 SINE B4 16 289 -3 7 1484 288 331 4 14 chr13 117915354 117915453 -2368859 + B1F SINE Alu 46 144 -5 7 1484 254 161 16 0 chr13 117918166 117918180 -2366132 + polypurine Low_complexity Low_complexity 4 17 0 7 1484 1176 61 0 0 chr13 117918180 117918327 -2365985 + B1_Mus1 SINE Alu 2 148 0 7 1484 254 161 16 0 chr13 117918327 117918374 -2365938 + GA-rich Low_complexity Low_complexity 18 65 0 7 1484 247 242 112 29 chr13 117918602 117918772 -2365540 + L1ME1 LINE L1 5308 5491 -673 7 1484 662 227 43 0 chr13 117919665 117919806 -2364506 - B1_Mur1 SINE Alu -1 148 2 7 1484 464 298 169 57 chr13 117919817 117920343 -2363969 + L1ME1 LINE L1 5586 6170 -9 7 1484 204 158 0 0 chr13 117920362 117920400 -2363912 + T-rich Low_complexity Low_complexity 1 38 0 7 1484 383 211 87 48 chr13 117920510 117920660 -2363652 - ID_B1 SINE B4 -1 223 18 7 1484 246 62 0 0 chr13 117920769 117920801 -2363511 + (TG)n Simple_repeat Simple_repeat 2 33 0 7 1484 881 304 66 10 chr13 117921671 117922079 -2362233 + Lx8 LINE L1 6095 6525 -948 7 1484 201 89 34 51 chr13 117922084 117922143 -2362169 + T-rich Low_complexity Low_complexity 2 59 0 7 1484 998 60 8 0 chr13 117922151 117922284 -2362028 - B1_Mus1 SINE Alu -2 146 13 7 1484 1654 339 58 29 chr13 117922286 117923183 -2361129 + Lx8 LINE L1 6549 7471 -2 7 1484 26 50 0 0 chr13 117923187 117923227 -2361085 + AT_rich Low_complexity Low_complexity 1 40 0 7 1484 214 224 61 0 chr13 117923242 117923291 -2361021 - B1F SINE Alu -1 148 97 7 1484 513 255 48 0 chr13 117924748 117924893 -2359419 - RSINE1 SINE B4 -12 153 2 7 1484 813 173 14 28 chr13 117925064 117925207 -2359105 - B1_Mus2 SINE Alu 0 147 7 7 1484 658 201 8 1 chr13 117925247 117925367 -2358945 + B1_Mur4 SINE Alu 2 120 0 7 1484 22 0 0 0 chr13 117925489 117925511 -2358801 + AT_rich Low_complexity Low_complexity 1 22 0 7 1484 23 0 0 0 chr13 117925563 117925586 -2358726 + AT_rich Low_complexity Low_complexity 1 23 0 7 1484 276 309 12 12 chr13 117926176 117926258 -2358054 + MER63D DNA AcHobo 3 84 -977 7 1484 456 330 9 0 chr13 117926495 117926607 -2357705 - PB1D7 SINE Alu -1 119 7 7 1484 324 195 58 29 chr13 117926909 117927083 -2357229 + (TA)n Simple_repeat Simple_repeat 1 179 0 7 1484 722 288 83 25 chr13 117927086 117927328 -2356984 - Lx8 LINE L1 -142 7331 7076 7 1484 1814 148 61 3 chr13 117927819 117928130 -2356182 + ORR1A4 LTR MaLR 1 329 0 7 1484 189 0 0 0 chr13 117928213 117928234 -2356078 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 7 1484 313 397 98 34 chr13 117928395 117928836 -2355476 - L1MEd LINE L1 -5646 473 5 7 1484 533 223 116 0 chr13 117929150 117929271 -2355041 + ID_B1 SINE B4 82 216 -8 7 1484 249 180 0 0 chr13 117929274 117929324 -2354988 + (CA)n Simple_repeat Simple_repeat 2 51 0 7 1484 365 290 21 11 chr13 117929474 117929568 -2354744 + ID_B1 SINE B4 81 175 -49 7 1484 624 171 0 0 chr13 117930234 117930374 -2353938 + CT-rich Low_complexity Low_complexity 3 142 0 7 1484 360 138 383 0 chr13 117930542 117930636 -2353676 + B1_Mm SINE Alu 12 141 -6 7 1484 7636 38 4 0 chr13 117930702 117931649 -2352663 + L1_Mus1 LINE L1 5616 6566 -1 7 1484 694 131 108 0 chr13 117933238 117933368 -2350944 - B1_Mus1 SINE Alu 0 148 5 7 1484 31344 85 9 3 chr13 117934312 117939573 -2344739 + L1Md_F2 LINE L1 298 5585 -298 7 1484 7674 65 7 4 chr13 117939574 117940565 -2343747 + L1Md_F2 LINE L1 5587 6580 -2 7 1484 396 0 0 0 chr13 117940565 117940609 -2343703 + (TA)n Simple_repeat Simple_repeat 2 45 0 7 1484 300 27 0 0 chr13 117940756 117940793 -2343519 + (A)n Simple_repeat Simple_repeat 1 37 0 7 1484 972 104 8 0 chr13 117940798 117940932 -2343380 + B1_Mus2 SINE Alu 1 135 -12 7 1484 520 14 0 28 chr13 117940932 117941003 -2343309 + (CAAAA)n Simple_repeat Simple_repeat 3 71 0 7 1484 537 0 137 0 chr13 117941173 117941326 -2342986 + (GCTG)n Simple_repeat Simple_repeat 3 176 0 7 1484 1024 208 9 18 chr13 117941613 117941838 -2342474 - URR1B DNA MER1_type 0 225 3 7 1484 1641 140 57 11 chr13 117941975 117942256 -2342056 - ORR1B1 LTR MaLR 0 394 101 7 1484 2840 76 0 3 chr13 117942256 117942638 -2341674 + L1Md_F2 LINE L1 6200 6580 -2 7 1484 273 29 0 0 chr13 117942897 117942931 -2341381 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 7 1484 367 178 0 40 chr13 117942931 117943001 -2341311 - ORR1B1 LTR MaLR -286 108 41 7 1484 223 286 0 41 chr13 117943113 117943186 -2341126 + CT-rich Low_complexity Low_complexity 3 72 0 7 1484 1188 54 0 26 chr13 117943274 117943285 -2341027 - B1_Mus1 SINE Alu 0 148 141 7 1484 230 0 33 0 chr13 117943285 117943315 -2340997 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 7 1484 1188 54 0 26 chr13 117943315 117943455 -2340857 - B1_Mus1 SINE Alu -8 140 1 7 1484 198 0 0 0 chr13 117943481 117943503 -2340809 + (TG)n Simple_repeat Simple_repeat 1 22 0 7 1484 502 271 92 7 chr13 117943574 117943726 -2340586 - RSINE1 SINE B4 0 165 1 7 1484 686 200 0 0 chr13 117943901 117944026 -2340286 - B1_Mur4 SINE Alu -25 125 1 7 1484 24 0 0 0 chr13 117944424 117944448 -2339864 + AT_rich Low_complexity Low_complexity 1 24 0 7 1484 302 288 9 0 chr13 117944496 117944601 -2339711 - PB1D10 SINE Alu -2 118 11 7 1484 562 316 87 46 chr13 117944968 117945313 -2338999 + MLT1A0 LTR MaLR 3 361 -4 7 1484 423 296 28 21 chr13 117945881 117946026 -2338286 + B1F SINE Alu 4 149 0 7 1484 251 295 10 10 chr13 117946043 117946139 -2338173 + MIRc SINE MIR 154 249 -19 7 1484 559 261 33 6 chr13 117946544 117946725 -2337587 + MLT2B4 LTR ERVL 1 186 -370 7 1484 24 32 0 0 chr13 117946737 117946768 -2337544 + AT_rich Low_complexity Low_complexity 1 31 0 7 1484 776 179 23 117 chr13 117946808 117947073 -2337239 + Lx9 LINE L1 7397 7636 -8 7 1484 736 78 60 9 chr13 117947251 117947367 -2336945 - Lx2 LINE L1 0 6997 6876 7 1484 344 93 12 0 chr13 117947367 117947421 -2336891 + Lx2 LINE L1 6219 6277 -723 7 1484 233 355 0 0 chr13 117947449 117947525 -2336787 + MLT2B4 LTR ERVL 394 469 -87 7 1484 460 264 126 24 chr13 117947723 117947890 -2336422 + B3A SINE B2 1 184 -14 7 1484 534 211 39 0 chr13 117947935 117948039 -2336273 + PB1D7 SINE Alu 6 113 -7 7 1484 1136 160 53 5 chr13 117949007 117949214 -2335098 - URR1B DNA MER1_type -3 222 6 7 1484 365 292 102 11 chr13 117949285 117949404 -2334908 - PB1D10 SINE Alu 0 117 1 7 1484 330 45 0 0 chr13 117949411 117949455 -2334857 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 7 1484 714 112 158 38 chr13 117949468 117949626 -2334686 - B2_Mm2 SINE B2 -18 177 1 7 1484 844 162 0 57 chr13 117950183 117950340 -2333972 - B1_Mur4 SINE Alu -1 149 2 7 1484 415 0 36 0 chr13 117950396 117950451 -2333861 + (TTTTG)n Simple_repeat Simple_repeat 2 58 0 7 1484 207 133 0 0 chr13 117950694 117950739 -2333573 + (T)n Simple_repeat Simple_repeat 1 45 0 7 1484 369 253 22 10 chr13 117950744 117950848 -2333464 - B1F2 SINE Alu -6 114 8 7 1484 2711 133 63 25 chr13 117951056 117951535 -2332777 - Lx3B LINE L1 -1 6972 6476 7 1484 328 311 0 11 chr13 117952357 117952448 -2331864 + PB1D10 SINE Alu 28 117 0 7 1484 393 215 111 9 chr13 117953205 117953313 -2330999 + MTD LTR MaLR 1 119 -300 7 1484 200 288 0 0 chr13 117953400 117953418 -2330894 + (TA)n Simple_repeat Simple_repeat 2 19 0 7 1484 309 51 0 0 chr13 117953418 117953457 -2330855 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 7 1484 200 288 0 0 chr13 117953457 117953497 -2330815 + (TA)n Simple_repeat Simple_repeat 2 41 0 7 1484 411 319 0 0 chr13 117953499 117953615 -2330697 - B1F SINE Alu -33 116 1 7 1484 243 0 0 0 chr13 117953932 117953959 -2330353 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1484 2943 68 200 9 chr13 117954125 117954555 -2329757 - RLTR1B LTR ERV1 0 512 1 7 1484 66986 30 0 5 chr13 117954555 117962143 -2322169 - MMERGLN-int LTR ERV1 0 7556 1 7 1484 2991 61 200 9 chr13 117962143 117962573 -2321739 - RLTR1B LTR ERV1 0 512 1 7 1484 545 53 0 26 chr13 117963601 117963679 -2320633 + (GGGA)n Simple_repeat Simple_repeat 1 76 0 7 1484 1152 62 0 14 chr13 117963792 117963940 -2320372 + B1_Mm SINE Alu 1 146 -1 7 1484 207 146 0 0 chr13 117964105 117964146 -2320166 + (A)n Simple_repeat Simple_repeat 1 41 0 7 185 414 338 138 22 chr13 117964606 117965006 -2319306 + MER44D DNA MER2_type 4 449 -256 7 1485 536 247 123 6 chr13 117965089 117965268 -2319044 - Lx8 LINE L1 -2 7471 7272 7 1485 325 204 114 0 chr13 117965276 117965364 -2318948 + MER44D DNA MER2_type 505 602 -103 7 1485 646 205 118 0 chr13 117965513 117965640 -2318672 + B1_Mur4 SINE Alu 4 145 -5 7 1485 1714 84 3 45 chr13 117965910 117966197 -2318115 - RLTR10A LTR ERVK 0 411 137 8 1485 1315 111 5 0 chr13 117966392 117966582 -2317730 + B2_Mm1a SINE B2 2 192 -1 8 1485 1307 118 5 0 chr13 117966892 117967078 -2317234 - B2_Mm1t SINE B2 -5 188 2 8 1485 385 230 130 0 chr13 117967122 117967222 -2317090 + PB1D7 SINE Alu 3 115 -5 8 1485 278 263 19 87 chr13 117967503 117967607 -2316705 - B4A SINE B4 -194 98 2 8 1485 244 311 30 76 chr13 117967672 117967715 -2316597 - B2_Mm2 SINE B2 -6 189 144 8 1485 1132 67 0 22 chr13 117967715 117967897 -2316415 + (TG)n Simple_repeat Simple_repeat 2 179 0 8 1485 551 275 7 1 chr13 117967897 117968051 -2316261 - B3A SINE B2 -44 154 1 8 1485 479 369 116 13 chr13 117968909 117969219 -2315093 + MLT2F LTR ERVL 156 497 -166 8 1485 581 177 15 0 chr13 117969409 117969535 -2314777 + ORR1D1 LTR MaLR 1 128 -246 8 1485 3385 151 63 31 chr13 117969535 117970526 -2313786 + RLTR13D1 LTR ERVK 1 1023 0 8 1485 943 259 39 0 chr13 117970526 117970766 -2313546 + ORR1D1 LTR MaLR 122 371 -3 8 1485 1159 264 100 12 chr13 117971046 117971408 -2312904 + MTD LTR MaLR 26 406 -13 8 1485 180 0 0 0 chr13 117971411 117971431 -2312881 + (CAA)n Simple_repeat Simple_repeat 2 21 0 8 1485 787 167 30 0 chr13 117971524 117971656 -2312656 + B1_Mur4 SINE Alu 6 141 -9 8 1485 606 266 0 0 chr13 117971689 117971813 -2312499 + B3 SINE B2 1 124 -92 8 1485 286 320 103 0 chr13 117973142 117973239 -2311073 - PB1 SINE Alu -4 123 17 8 1485 602 178 329 25 chr13 117973488 117973649 -2310663 + B3 SINE B2 1 210 -6 8 1485 210 118 0 0 chr13 117973748 117973782 -2310530 + (CTAAT)n Simple_repeat Simple_repeat 1 34 0 8 1485 719 201 0 0 chr13 117974045 117974179 -2310133 + B1_Mus1 SINE Alu 5 138 -10 8 1485 516 299 10 28 chr13 117974249 117974444 -2309868 + Lx9 LINE L1 6877 7194 -450 8 1485 301 294 48 40 chr13 117974554 117974624 -2309688 + MER45B DNA Tip100 352 425 -615 8 1485 2799 100 231 9 chr13 117974624 117975088 -2309224 + RMER2 LTR ERV1 1 567 0 8 1485 301 294 48 40 chr13 117975088 117975141 -2309171 + MER45B DNA Tip100 426 476 -564 8 1485 1110 99 0 0 chr13 117975365 117975507 -2308805 + B1_Mus1 SINE Alu 2 143 -5 8 1485 279 0 0 0 chr13 117975508 117975539 -2308773 + (CAA)n Simple_repeat Simple_repeat 2 32 0 8 1485 504 174 0 0 chr13 117975539 117975660 -2308652 + (TA)n Simple_repeat Simple_repeat 2 122 0 8 1485 1026 127 0 0 chr13 117975715 117975872 -2308440 - B2_Mm2 SINE B2 -37 158 2 8 1485 418 264 66 0 chr13 117975890 117976011 -2308301 + ID_B1 SINE B4 81 209 -15 8 1485 271 206 44 0 chr13 117976009 117976077 -2308235 - B4A SINE B4 -217 75 5 8 1485 2065 128 22 3 chr13 117976094 117976416 -2307896 - ORR1A4 LTR MaLR -1 328 1 8 1485 390 42 0 0 chr13 117976429 117976477 -2307835 + (TG)n Simple_repeat Simple_repeat 1 48 0 8 1485 401 321 39 39 chr13 117976532 117976736 -2307576 - B4A SINE B4 -32 260 57 8 1485 879 343 59 26 chr13 117976789 117977283 -2307029 + MER45B DNA Tip100 110 619 -421 8 1485 588 233 36 124 chr13 117977283 117977557 -2306755 + L1_Mur3 LINE L1 5028 5277 -603 8 1485 835 171 27 7 chr13 117977558 117977705 -2306607 + B1_Mur4 SINE Alu 1 150 0 8 1485 285 98 0 0 chr13 117977707 117977748 -2306564 + (TAA)n Simple_repeat Simple_repeat 2 42 0 8 1485 1489 194 85 18 chr13 117977748 117978079 -2306233 - ORR1B1 LTR MaLR -1 393 41 8 1485 3449 292 75 27 chr13 117978142 117979485 -2304827 + Lx7 LINE L1 6118 7472 -1 8 1485 250 330 130 0 chr13 117979565 117979580 -2304732 + B4 SINE B4 69 98 -194 8 1485 539 259 69 0 chr13 117979580 117979711 -2304601 + B1F SINE Alu 1 140 -9 8 1485 378 0 0 0 chr13 117979720 117979762 -2304550 + (CA)n Simple_repeat Simple_repeat 1 42 0 8 1485 531 0 0 0 chr13 117979762 117979820 -2304492 + (GA)n Simple_repeat Simple_repeat 2 60 0 8 1485 3149 54 15 5 chr13 117979938 117980330 -2303982 + MTA_Mm LTR MaLR 1 396 0 8 1485 23 33 0 0 chr13 117980988 117981018 -2303294 + AT_rich Low_complexity Low_complexity 1 30 0 8 1485 801 145 213 11 chr13 117981188 117981376 -2302936 + URR1A DNA MER1_type 1 226 0 8 1485 342 0 0 0 chr13 117982066 117982104 -2302208 + (TG)n Simple_repeat Simple_repeat 1 38 0 8 1485 252 243 0 0 chr13 117982183 117982257 -2302055 + (TG)n Simple_repeat Simple_repeat 1 74 0 8 1485 306 332 34 73 chr13 117982324 117982529 -2301783 - HAL1 LINE L1 -604 1903 1707 8 1485 296 316 60 25 chr13 117982654 117982855 -2301457 - HAL1 LINE L1 -754 1753 1546 8 1485 260 83 0 20 chr13 117982856 117982905 -2301407 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 8 1485 470 242 45 8 chr13 117982920 117983053 -2301259 + B1F SINE Alu 5 142 -7 8 1485 772 209 0 7 chr13 117983063 117983212 -2301100 + B1_Mur2 SINE Alu 1 148 -1 8 1485 926 167 0 6 chr13 117983254 117983435 -2300877 + CT-rich Low_complexity Low_complexity 1 180 0 8 1485 902 150 13 20 chr13 117983986 117984136 -2300176 - B1_Mur4 SINE Alu -1 149 1 8 1485 373 247 65 23 chr13 117984172 117984298 -2300014 + B3A SINE B2 3 152 -46 8 1485 468 0 0 0 chr13 117985205 117985257 -2299055 + (TC)n Simple_repeat Simple_repeat 1 52 0 8 1485 429 20 0 0 chr13 117985257 117985306 -2299006 + (CA)n Simple_repeat Simple_repeat 1 50 0 8 1485 998 102 0 33 chr13 117985361 117985513 -2298799 + B1_Mus2 SINE Alu 1 147 0 8 1485 218 89 0 43 chr13 117985515 117985562 -2298750 + (TAAAAA)n Simple_repeat Simple_repeat 4 48 0 8 1485 566 211 118 22 chr13 117986873 117987009 -2297303 - B1_Mur1 SINE Alu 0 149 1 8 1485 288 0 0 0 chr13 117987153 117987185 -2297127 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 8 1485 216 0 0 0 chr13 117987309 117987333 -2296979 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 8 1485 845 225 26 26 chr13 117987334 117987526 -2296786 - B3 SINE B2 -24 192 1 8 1485 490 48 0 0 chr13 117988431 117988494 -2295818 + B2_Mm1t SINE B2 107 169 -24 8 1485 429 20 0 0 chr13 117988500 117988550 -2295762 + (TC)n Simple_repeat Simple_repeat 1 50 0 8 1485 207 0 0 0 chr13 117988862 117988885 -2295427 + (A)n Simple_repeat Simple_repeat 1 23 0 8 1485 338 154 27 31 chr13 117989105 117989210 -2295102 - B1_Mur4 SINE Alu -13 107 7 8 1485 1317 232 110 24 chr13 117989210 117989545 -2294767 + Lx5 LINE L1 6681 7044 -6 8 1485 805 149 16 24 chr13 117989733 117989981 -2294331 + CT-rich Low_complexity Low_complexity 1 245 0 8 1485 1167 130 43 0 chr13 117989999 117990184 -2294128 - B2_Mm2 SINE B2 -2 193 1 8 1485 454 235 10 0 chr13 117990213 117990311 -2294001 - PB1D10 SINE Alu -8 109 11 8 1485 357 275 107 0 chr13 117991734 117991889 -2292423 - MLT1B LTR MaLR 0 467 217 8 1485 423 0 0 0 chr13 117992020 117992067 -2292245 + (TG)n Simple_repeat Simple_repeat 1 47 0 8 1485 475 284 35 7 chr13 117992070 117992212 -2292100 - RSINE1 SINE B4 -11 154 9 8 1485 387 237 68 0 chr13 117992296 117992414 -2291898 - MLT1B LTR MaLR -240 150 25 8 1485 297 295 89 0 chr13 117992427 117992539 -2291773 - MLT1C LTR MaLR -336 131 10 8 1485 263 26 0 49 chr13 117992662 117992703 -2291609 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 8 1485 261 0 0 0 chr13 117992816 117992845 -2291467 + (CAGA)n Simple_repeat Simple_repeat 3 31 0 8 1485 286 167 0 0 chr13 117993847 117993901 -2290411 + MTE2a LTR MaLR 1 54 -325 8 1485 200 59 29 0 chr13 117993984 117994018 -2290294 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 8 1485 180 125 0 0 chr13 117994021 117994053 -2290259 + (TC)n Simple_repeat Simple_repeat 1 32 0 8 1485 423 272 112 0 chr13 117994053 117994178 -2290134 - B1_Mur2 SINE Alu -1 148 10 8 1485 965 236 42 56 chr13 117994206 117994493 -2289819 + MTE2a LTR MaLR 97 379 0 8 1485 323 326 30 44 chr13 117994873 117995008 -2289304 + MLT1N2 LTR MaLR 50 182 -380 8 1485 1076 71 35 0 chr13 117995369 117995510 -2288802 + B1_Mus2 SINE Alu 2 147 0 8 1485 1219 94 56 0 chr13 117996313 117996493 -2287819 + B2_Mm2 SINE B2 2 191 -4 8 1485 240 175 0 0 chr13 117996997 117997060 -2287252 + GA-rich Low_complexity Low_complexity 1 63 0 8 1485 256 164 18 35 chr13 117997103 117997160 -2287152 + GA-rich Low_complexity Low_complexity 3 58 0 8 1485 622 278 142 26 chr13 117997942 117998252 -2286060 - MLT1E LTR MaLR -2 651 306 8 1485 771 164 7 58 chr13 117998721 117998876 -2285436 + B1_Mus1 SINE Alu 2 148 0 8 1485 590 260 0 0 chr13 117998888 117999011 -2285301 + B1_Mur1 SINE Alu 2 124 -25 8 1485 1414 79 16 5 chr13 117999040 117999230 -2285082 - B2_Mm2 SINE B2 -1 194 3 8 1485 1977 173 65 5 chr13 117999237 117999620 -2284692 - MTC LTR MaLR -13 408 3 8 1485 712 211 16 0 chr13 118000922 118001050 -2283262 - B3 SINE B2 -86 130 1 1 1485 335 248 17 34 chr13 118001203 118001320 -2282992 - MLT1A1 LTR MaLR -22 386 272 2 1485 546 16 0 0 chr13 118001441 118001504 -2282808 + (GA)n Simple_repeat Simple_repeat 1 63 0 3 1485 393 149 0 0 chr13 118003003 118003070 -2281242 + (TA)n Simple_repeat Simple_repeat 1 67 0 4 1485 391 204 49 12 chr13 118003097 118003341 -2280971 + (TA)n Simple_repeat Simple_repeat 1 252 0 4 1485 1766 10 0 0 chr13 118003542 118003734 -2280578 - B2_Mm1t SINE B2 0 193 2 5 1485 317 252 68 0 chr13 118004598 118004701 -2279611 + MER95 LTR ERV 5 114 -317 6 1485 273 98 0 0 chr13 118004717 118004758 -2279554 + (T)n Simple_repeat Simple_repeat 1 41 0 7 1485 193 29 29 29 chr13 118004840 118004875 -2279437 + (GGGTG)n Simple_repeat Simple_repeat 3 37 0 8 1485 861 59 7 49 chr13 118005228 118005370 -2278942 + B2_Mm1t SINE B2 58 193 0 9 1485 243 88 0 0 chr13 118006762 118006796 -2277516 + (TTCG)n Simple_repeat Simple_repeat 3 36 0 1 1485 838 186 0 0 chr13 118006796 118006936 -2277376 - B1_Mur4 SINE Alu -9 141 2 1 1485 2006 109 88 28 chr13 118007108 118007495 -2276817 + RMER17C LTR ERVK 1 410 0 1 1485 21 57 0 0 chr13 118007522 118007557 -2276755 + AT_rich Low_complexity Low_complexity 1 35 0 1 1485 864 193 66 11 chr13 118007588 118007771 -2276541 + B3 SINE B2 3 195 -21 1 1485 263 306 12 12 chr13 118007811 118007897 -2276415 + PB1 SINE Alu 37 122 -5 1 1485 1153 53 7 0 chr13 118007931 118008083 -2276229 + B2_Mm2 SINE B2 5 157 -38 1 1485 405 0 0 0 chr13 118008083 118008128 -2276184 + (TAA)n Simple_repeat Simple_repeat 3 47 0 1 1485 204 158 53 0 chr13 118010904 118010961 -2273351 + CT-rich Low_complexity Low_complexity 4 63 0 1 1485 238 333 42 17 chr13 118011142 118011261 -2273051 - MER5B DNA MER1_type -41 137 16 1 1485 586 134 189 0 chr13 118011458 118011585 -2272727 + B3 SINE B2 64 214 -2 2 1485 1472 73 16 0 chr13 118011879 118012071 -2272241 - B2_Mm2 SINE B2 0 195 1 2 1485 206 267 104 40 chr13 118012071 118012196 -2272116 - MIR SINE MIR -116 146 14 2 1485 323 285 76 8 chr13 118012375 118012506 -2271806 - RSINE1 SINE B4 -2 163 24 2 1485 257 249 212 34 chr13 118013708 118013918 -2270394 + L1MC4 LINE L1 6658 6953 -1089 2 1485 222 324 0 0 chr13 118013963 118014034 -2270278 - PB1D10 SINE Alu -14 103 33 2 1485 350 296 40 123 chr13 118014136 118014281 -2270031 + L1MC4 LINE L1 7267 7397 -645 2 1485 336 48 0 0 chr13 118014281 118014323 -2269989 + (TCC)n Simple_repeat Simple_repeat 1 42 0 2 1485 350 296 40 123 chr13 118014323 118014428 -2269884 + L1MC4 LINE L1 7398 7496 -546 2 1485 275 284 12 0 chr13 118014901 118014982 -2269330 + (TATATG)n Simple_repeat Simple_repeat 1 82 0 2 1485 213 132 0 0 chr13 118015005 118015043 -2269269 + (T)n Simple_repeat Simple_repeat 1 38 0 2 1485 1133 63 0 0 chr13 118015043 118015186 -2269126 - B1_Mus2 SINE Alu 0 147 5 2 1485 599 301 0 0 chr13 118015189 118015325 -2268987 - B3A SINE B2 -62 136 1 3 1485 1272 81 0 0 chr13 118015387 118015561 -2268751 + (TCTCC)n Simple_repeat Simple_repeat 4 177 0 3 1485 719 71 254 9 chr13 118015729 118015843 -2268469 + B1_Mus1 SINE Alu 2 143 -5 3 1485 265 339 35 9 chr13 118016075 118016191 -2268121 - B1_Mus1 SINE Alu -27 121 3 3 1485 1201 69 0 0 chr13 118017006 118017166 -2267146 + B2_Mm1t SINE B2 1 160 -33 3 1485 294 29 0 0 chr13 118017166 118017201 -2267111 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 3 1485 241 304 0 55 chr13 118017478 118017551 -2266761 - ID4 SINE ID -1 82 14 3 1485 332 274 73 93 chr13 118017603 118017808 -2266504 + B3 SINE B2 8 208 -8 3 1485 24 0 0 0 chr13 118017849 118017873 -2266439 + AT_rich Low_complexity Low_complexity 1 24 0 3 1485 254 239 15 46 chr13 118017946 118018037 -2266275 - PB1D10 SINE Alu 0 120 36 3 1485 249 83 0 0 chr13 118018924 118018960 -2265352 + (A)n Simple_repeat Simple_repeat 1 36 0 4 1485 180 111 0 0 chr13 118019466 118019493 -2264819 + (C)n Simple_repeat Simple_repeat 1 27 0 4 1485 246 32 0 0 chr13 118019616 118019647 -2264665 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 4 1485 866 148 42 0 chr13 118019955 118020097 -2264215 + B1_Mus1 SINE Alu 1 148 0 4 1485 1157 97 18 0 chr13 118020126 118020291 -2264021 + B2_Mm2 SINE B2 1 168 -27 4 1485 297 0 0 0 chr13 118021209 118021242 -2263070 + (TC)n Simple_repeat Simple_repeat 2 34 0 4 1485 575 117 0 11 chr13 118021242 118021336 -2262976 + (TA)n Simple_repeat Simple_repeat 1 94 0 4 1485 207 171 40 0 chr13 118021338 118021414 -2262898 + (CA)n Simple_repeat Simple_repeat 1 79 0 4 1485 294 226 0 0 chr13 118021415 118021468 -2262844 - RSINE1 SINE B4 -101 64 12 4 1485 239 71 24 0 chr13 118021979 118022021 -2262291 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1485 219 298 0 0 chr13 118022144 118022201 -2262111 + (TG)n Simple_repeat Simple_repeat 2 58 0 5 1485 378 277 64 40 chr13 118022616 118022789 -2261523 + MER92A LTR ERV1 234 410 -2 5 1485 1474 75 5 0 chr13 118022961 118023148 -2261164 + B2_Mm1a SINE B2 2 189 -4 5 1485 261 0 0 0 chr13 118023399 118023428 -2260884 + (T)n Simple_repeat Simple_repeat 1 29 0 5 1485 414 291 105 13 chr13 118023706 118023859 -2260453 - MIR SINE MIR -73 189 23 5 1485 423 0 0 0 chr13 118024570 118024617 -2259695 + (TG)n Simple_repeat Simple_repeat 2 48 0 5 1485 274 74 37 0 chr13 118025375 118025429 -2258883 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 5 1485 672 120 43 0 chr13 118025429 118025546 -2258766 - B1_Mur3 SINE Alu 0 149 28 5 1485 711 211 14 0 chr13 118026813 118026960 -2257352 - B3 SINE B2 -28 188 40 5 1485 2525 82 0 3 chr13 118027200 118027528 -2256784 - ORR1A2 LTR MaLR 0 327 1 5 1485 3199 168 38 14 chr13 118027585 118028165 -2256147 - Lx5 LINE L1 -8 7042 6449 6 1485 26 30 0 0 chr13 118028168 118028201 -2256111 + AT_rich Low_complexity Low_complexity 1 33 0 6 1485 604 183 168 25 chr13 118028295 118028491 -2255821 + MTD LTR MaLR 196 419 0 6 1485 745 88 18 0 chr13 118029490 118029603 -2254709 - B1_Mus2 SINE Alu 0 147 33 6 1485 379 312 36 36 chr13 118029928 118030094 -2254218 - RMER15 LTR ERVL -58 517 352 6 1485 1612 47 0 15 chr13 118030494 118030690 -2253622 - B2_Mm1a SINE B2 0 193 1 6 1485 352 299 0 0 chr13 118030816 118030903 -2253409 - PB1D10 SINE Alu -6 111 25 6 1485 794 241 164 11 chr13 118032001 118032270 -2252042 - MTEb LTR MaLR 0 379 70 6 1485 858 216 23 50 chr13 118032964 118033183 -2251129 + B3 SINE B2 1 213 -3 6 1485 545 292 13 7 chr13 118033260 118033415 -2250897 - RSINE1 SINE B4 -5 160 5 6 1485 233 132 35 70 chr13 118034164 118034221 -2250091 - B1_Mus2 SINE Alu -1 146 92 7 1485 1058 241 145 3 chr13 118034762 118035086 -2249226 + MTD LTR MaLR 11 380 -39 7 1485 477 287 70 0 chr13 118035795 118035924 -2248388 - ORR1D2 LTR MaLR -229 141 4 7 1485 1039 297 52 68 chr13 118035973 118036471 -2247841 - Lx8 LINE L1 -707 6766 6277 7 1485 1523 255 33 88 chr13 118036479 118036595 -2247717 + L1_Mur3 LINE L1 3991 4104 -1776 7 1485 380 111 16 0 chr13 118036595 118036658 -2247654 + (TG)n Simple_repeat Simple_repeat 1 64 0 7 1485 1523 255 33 88 chr13 118036658 118036859 -2247453 + L1_Mur3 LINE L1 4105 4295 -1585 7 1485 1571 52 5 0 chr13 118036859 118037050 -2247262 - B2_Mm1a SINE B2 0 193 2 7 1485 1523 255 33 88 chr13 118037050 118037423 -2246889 + L1_Mur3 LINE L1 4296 4644 -1236 7 1485 1113 87 72 50 chr13 118037752 118037933 -2246379 + B2_Mm2 SINE B2 2 186 -9 7 1485 927 144 7 0 chr13 118039315 118039461 -2244851 + B1_Mus1 SINE Alu 1 147 -1 7 1485 22 35 0 0 chr13 118039481 118039510 -2244802 + AT_rich Low_complexity Low_complexity 1 29 0 7 1485 32139 21 1 0 chr13 118039535 118043891 -2240421 - L1Md_T LINE L1 0 6582 2224 8 1485 324 70 0 0 chr13 118044381 118044424 -2239888 + (CTG)n Simple_repeat Simple_repeat 2 44 0 8 1485 180 205 38 25 chr13 118045098 118045178 -2239134 + CT-rich Low_complexity Low_complexity 1 81 0 8 1485 865 271 147 52 chr13 118045213 118045306 -2239006 - L1M3 LINE L1 -1493 4647 4556 8 1485 2484 80 3 3 chr13 118045306 118045633 -2238679 - ORR1A2 LTR MaLR 0 327 1 8 1485 865 271 147 52 chr13 118045633 118045722 -2238590 - L1M3 LINE L1 -1585 4555 4461 8 1485 200 35 35 0 chr13 118045722 118045751 -2238561 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 8 1485 865 271 147 52 chr13 118045751 118046236 -2238076 - L1M3 LINE L1 -1680 4460 3916 8 1485 1042 271 118 20 chr13 118046435 118046715 -2237597 - Lx8 LINE L1 -318 7155 6845 8 1485 1321 98 38 0 chr13 118046715 118046899 -2237413 + B2_Mm2 SINE B2 2 192 -3 8 1485 1042 271 118 20 chr13 118046899 118047025 -2237287 - Lx8 LINE L1 -629 6844 6711 8 1485 186 103 0 0 chr13 118047026 118047055 -2237257 + (TCTG)n Simple_repeat Simple_repeat 2 30 0 8 1485 505 272 40 0 chr13 118047058 118047183 -2237129 - ID_B1 SINE B4 -7 217 88 8 1485 827 170 14 7 chr13 118047992 118048134 -2236178 + B1_Mur4 SINE Alu 1 143 -7 9 1485 220 311 95 88 chr13 118048608 118048756 -2235556 + B4A SINE B4 64 212 -80 9 1485 546 228 57 8 chr13 118048646 118048770 -2235542 + B1_Mur1 SINE Alu 9 138 -11 9 1485 333 0 0 0 chr13 118048781 118048818 -2235494 + (TG)n Simple_repeat Simple_repeat 2 38 0 9 1485 2622 149 94 12 chr13 118049203 118049691 -2234621 - RLTR11A LTR ERVK 0 528 1 9 1485 2090 197 2 50 chr13 118049794 118050233 -2234079 + MTD LTR MaLR 2 419 0 9 1485 207 200 0 0 chr13 118051529 118051574 -2232738 + T-rich Low_complexity Low_complexity 1 45 0 9 1485 652 277 82 50 chr13 118053346 118053627 -2230685 + B4A SINE B4 1 290 -2 9 1485 344 296 62 69 chr13 118053972 118054117 -2230195 + B1F SINE Alu 6 149 0 9 1485 667 319 29 29 chr13 118056855 118057133 -2227179 - B4 SINE B4 -5 287 10 9 1485 1055 95 69 29 chr13 118057308 118057482 -2226830 + B2_Mm2 SINE B2 3 183 -12 1 1485 629 273 53 10 chr13 118058139 118058346 -2225966 + B3 SINE B2 1 216 0 1 1485 197 257 40 26 chr13 118058755 118058831 -2225481 + MER5B DNA MER1_type 53 129 -49 1 1485 995 106 21 4 chr13 118059203 118059361 -2224951 - Lx4A LINE L1 -416 6642 6460 1 1485 1489 63 16 10 chr13 118059468 118059661 -2224651 - B2_Mm2 SINE B2 0 195 2 1 1485 842 140 223 0 chr13 118060963 118061120 -2223192 - B2_Mm1t SINE B2 -1 192 1 1 1485 1306 77 32 42 chr13 118061234 118061424 -2222888 + B2_Mm2 SINE B2 2 189 -6 1 1485 309 223 2 0 chr13 118061455 118061519 -2222793 - B1F1 SINE Alu -62 65 1 1 1485 279 273 0 0 chr13 118061464 118061530 -2222782 - B4 SINE B4 -152 140 75 1 1485 201 39 0 0 chr13 118062997 118063023 -2221289 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1 1485 753 113 0 0 chr13 118066334 118066475 -2217837 + (TG)n Simple_repeat Simple_repeat 2 142 0 1 1485 529 295 20 0 chr13 118067143 118067292 -2217020 - B3A SINE B2 -24 174 23 1 1485 1175 62 7 0 chr13 118067363 118067508 -2216804 - B1_Mm SINE Alu 0 147 2 1 1485 680 184 0 0 chr13 118067517 118067631 -2216681 - B1_Mur4 SINE Alu -34 116 3 1 1485 550 333 24 0 chr13 118068707 118068875 -2215437 - B3A SINE B2 -26 172 1 1 1485 286 303 61 0 chr13 118069178 118069277 -2215035 + L1MDa LINE L1 1953 2057 -4576 1 1485 315 278 36 80 chr13 118069424 118069561 -2214751 + L1MDa LINE L1 2242 2372 -4261 1 1485 483 274 99 37 chr13 118069935 118070178 -2214134 + L1MDa LINE L1 2695 2952 -3585 1 1485 243 0 0 0 chr13 118070219 118070246 -2214066 + (CA)n Simple_repeat Simple_repeat 1 27 0 1 1485 454 231 27 20 chr13 118070583 118070733 -2213579 + L1MDa LINE L1 3503 3653 -2884 1 1485 877 168 108 5 chr13 118070810 118071032 -2213280 - Lx9 LINE L1 0 7644 7400 1 1485 320 309 49 21 chr13 118071334 118071476 -2212836 + Tigger5 DNA MER2_type 87 232 -2174 1 1485 364 278 39 13 chr13 118071502 118071655 -2212657 + Tigger5 DNA MER2_type 2208 2364 -42 1 1485 1106 60 0 0 chr13 118071969 118072103 -2212209 + B1_Mus1 SINE Alu 2 135 -13 1 1485 519 17 0 0 chr13 118072103 118072163 -2212149 + (CA)n Simple_repeat Simple_repeat 1 60 0 1 1485 189 0 0 0 chr13 118072228 118072249 -2212063 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1 1485 1375 58 29 0 chr13 118072249 118072423 -2211889 - B2_Mm1t SINE B2 -11 182 4 1 1485 281 267 66 9 chr13 118073431 118073537 -2210775 - L1MB1 LINE L1 -50 6118 6007 1 1485 247 231 95 88 chr13 118073555 118073702 -2210610 - L1MB1 LINE L1 -206 5962 5815 1 1485 258 152 0 0 chr13 118073702 118073761 -2210551 + CT-rich Low_complexity Low_complexity 1 59 0 1 1485 887 246 73 92 chr13 118073761 118074142 -2210170 - MTE2a LTR MaLR -2 377 4 1 1485 479 289 20 13 chr13 118074145 118074296 -2210016 + RSINE1 SINE B4 8 159 -6 1 1485 1084 155 0 44 chr13 118074481 118074684 -2209628 - B2_Mm2 SINE B2 0 195 2 1 1485 332 274 39 46 chr13 118074812 118074942 -2209370 - B1F SINE Alu -9 140 12 1 1485 806 174 14 0 chr13 118074966 118075104 -2209208 - B1_Mur3 SINE Alu 0 149 10 1 1485 255 338 0 15 chr13 118075046 118075112 -2209200 - B4A SINE B4 -140 152 88 1 1485 339 25 0 0 chr13 118075226 118075266 -2209046 + (TG)n Simple_repeat Simple_repeat 1 40 0 1 1485 207 0 0 0 chr13 118075269 118075292 -2209020 + (CA)n Simple_repeat Simple_repeat 2 24 0 1 1485 1630 210 30 103 chr13 118075319 118075464 -2208848 - Lx7 LINE L1 -4 7692 7551 1 1485 1183 49 0 0 chr13 118075464 118075607 -2208705 + B1_Mm SINE Alu 5 147 0 1 1485 1630 210 30 103 chr13 118075607 118075851 -2208461 - Lx7 LINE L1 -146 7550 7326 1 1485 306 0 0 0 chr13 118075851 118075885 -2208427 + (CA)n Simple_repeat Simple_repeat 2 35 0 1 1485 1630 210 30 103 chr13 118075885 118076030 -2208282 - Lx7 LINE L1 -371 7325 7196 1 1485 1114 265 129 9 chr13 118076031 118076414 -2207898 - L1_Mur3 LINE L1 -6484 1228 800 1 1485 183 129 0 0 chr13 118076414 118076445 -2207867 + (CGTG)n Simple_repeat Simple_repeat 1 31 0 1 1485 1114 265 129 9 chr13 118076445 118076503 -2207809 - L1_Mur3 LINE L1 -6913 799 735 1 1485 231 319 54 36 chr13 118076544 118076710 -2207602 - L1_Mur3 LINE L1 -7313 399 231 1 1485 260 272 37 0 chr13 118076711 118076792 -2207520 - L1_Mur3 LINE L1 -7031 681 598 1 1485 277 258 100 30 chr13 118078926 118079026 -2205286 - L1M3c LINE L1 -5857 284 178 1 1485 638 197 106 0 chr13 118079290 118079422 -2204890 + B1_Mur4 SINE Alu 5 150 0 1 1485 222 176 0 0 chr13 118079463 118079514 -2204798 + (CCA)n Simple_repeat Simple_repeat 1 51 0 1 1485 363 23 0 0 chr13 118079514 118079558 -2204754 + (CA)n Simple_repeat Simple_repeat 2 45 0 1 1485 185 0 40 0 chr13 118079581 118079606 -2204706 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 1 1485 3108 66 29 7 chr13 118080689 118081101 -2203211 - BGLII LTR ERVK 0 421 1 1 1485 3912 78 0 36 chr13 118081574 118082123 -2202189 - L1Md_F2 LINE L1 0 6582 6054 1 1485 397 45 61 0 chr13 118083121 118083187 -2201125 + (TCTA)n Simple_repeat Simple_repeat 3 72 0 1 1485 821 226 38 19 chr13 118083824 118084036 -2200276 + B3 SINE B2 1 216 0 1 1485 226 279 135 7 chr13 118084402 118084543 -2199769 - L2 LINE L2 -544 2875 2717 1 1485 3239 8 5 5 chr13 118084595 118084962 -2199350 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1485 56419 21 16 15 chr13 118084962 118091427 -2192885 + IAPEz-int LTR ERVK 8 6481 0 1 1485 3239 8 5 5 chr13 118091427 118091794 -2192518 + IAPLTR1_Mm LTR ERVK 1 367 0 1 1485 1952 165 122 5 chr13 118092161 118092538 -2191774 + MTC LTR MaLR 1 421 0 1 1485 2184 171 92 5 chr13 118092545 118092979 -2191333 - L1_Mur2 LINE L1 -211 5666 5195 1 1485 480 118 20 0 chr13 118092979 118093081 -2191231 + Lx5 LINE L1 6946 7049 -1 1 1485 279 173 0 0 chr13 118093146 118093198 -2191114 + GA-rich Low_complexity Low_complexity 2 53 0 1 1485 203 95 48 0 chr13 118093206 118093248 -2191064 + (TAGA)n Simple_repeat Simple_repeat 4 47 0 1 1485 508 255 48 118 chr13 118093775 118094165 -2190147 + RMER2 LTR ERV1 1 429 -138 1 1486 699 12 0 0 chr13 118096342 118096422 -2187890 + (TTTC)n Simple_repeat Simple_repeat 2 81 0 1 1486 841 154 0 7 chr13 118097205 118097342 -2186970 + B1_Mur3 SINE Alu 1 136 -13 1 1486 254 29 29 0 chr13 118097346 118097381 -2186931 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 1 1486 232 282 13 13 chr13 118097605 118097684 -2186628 + L1MC4 LINE L1 1383 1461 -4850 1 1486 3733 80 74 22 chr13 118097721 118098260 -2186052 - RMER2 LTR ERV1 0 567 1 1 1486 743 171 224 11 chr13 118098393 118098576 -2185736 + URR1A DNA MER1_type 1 222 -4 1 1486 232 238 16 0 chr13 118098578 118098641 -2185671 + L1MC4 LINE L1 1613 1676 -4539 1 1486 277 91 35 35 chr13 118098644 118098701 -2185611 - Lx6 LINE L1 0 7460 7404 1 1486 658 300 141 24 chr13 118098725 118099220 -2185092 + L1MC4 LINE L1 1790 2342 -3873 1 1486 359 21 21 0 chr13 118099542 118099590 -2184722 + (CA)n Simple_repeat Simple_repeat 2 50 0 1 1486 180 0 0 0 chr13 118099702 118099722 -2184590 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1 1486 234 276 0 0 chr13 118099724 118099782 -2184530 - MER74B LTR ERVL -30 592 535 1 1486 928 230 54 0 chr13 118099783 118099987 -2184325 + B3 SINE B2 1 215 -1 1 1486 626 0 14 0 chr13 118101126 118101200 -2183112 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 1 1486 327 220 152 66 chr13 118101236 118101387 -2182925 - RSINE1 SINE B4 0 165 2 1 1486 318 26 0 0 chr13 118102211 118102250 -2182062 + (CA)n Simple_repeat Simple_repeat 2 40 0 1 1486 1150 62 0 27 chr13 118102380 118102529 -2181783 + B1_Mus2 SINE Alu 1 145 -2 1 1486 731 157 0 14 chr13 118103624 118103766 -2180546 + (TATATG)n Simple_repeat Simple_repeat 4 143 0 1 1486 252 292 0 0 chr13 118104695 118104760 -2179552 + CT-rich Low_complexity Low_complexity 1 65 0 1 1486 425 378 75 15 chr13 118104981 118105314 -2178998 - MER70B LTR ERVL -188 390 38 1 1486 4254 114 29 56 chr13 118105895 118106251 -2178061 + RMER17A LTR ERVK 1 348 -403 1 1486 1295 62 11 0 chr13 118106251 118106428 -2177884 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 1 1486 4254 114 29 56 chr13 118106428 118106843 -2177469 + RMER17A LTR ERVK 349 751 0 1 1486 801 258 150 15 chr13 118107093 118107353 -2176959 + MTD LTR MaLR 3 297 -122 1 1486 240 88 0 0 chr13 118107421 118107455 -2176857 - Lx4B LINE L1 -4 7054 7021 1 1486 6500 74 7 4 chr13 118107462 118108322 -2175990 - L1Md_F LINE L1 -5702 1280 419 1 1486 802 280 114 81 chr13 118108365 118109242 -2175070 + MTC-int LTR MaLR 1 1030 -228 1 1486 653 231 65 76 chr13 118109242 118109384 -2174928 + Lx7 LINE L1 7423 7556 -140 1 1486 2979 88 92 22 chr13 118109384 118109839 -2174473 - Lx LINE L1 -4 6650 6164 1 1486 653 231 65 76 chr13 118109839 118109973 -2174339 + Lx7 LINE L1 7557 7696 0 1 1486 292 162 214 0 chr13 118110001 118110118 -2174194 + MTC-int LTR MaLR 1001 1142 -116 1 1486 1197 55 0 7 chr13 118110124 118110271 -2174041 + B1_Mus2 SINE Alu 1 146 -1 1 1486 206 88 59 0 chr13 118110271 118110305 -2174007 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 1 1486 1090 258 108 9 chr13 118110391 118110716 -2173596 + MTD LTR MaLR 51 407 -12 1 1486 1008 223 230 13 chr13 118111359 118111668 -2172644 - MTE2a LTR MaLR 0 379 4 1 1486 1968 187 77 3 chr13 118111668 118112060 -2172252 - MTC LTR MaLR 0 421 1 1 1486 456 271 93 28 chr13 118112551 118112767 -2171545 - L1MA9 LINE L1 -10 6302 6073 1 1486 288 297 102 39 chr13 118112953 118113202 -2171110 - L1MA9 LINE L1 -289 6002 5739 1 1486 427 325 9 0 chr13 118113285 118113399 -2170913 + RSINE1 SINE B4 5 119 -46 1 1486 324 64 0 0 chr13 118113427 118113474 -2170838 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1486 1241 92 17 17 chr13 118113504 118113681 -2170631 - B2_Mm2 SINE B2 -14 181 5 1 1486 273 338 118 43 chr13 118113909 118114070 -2170242 - ORR1E LTR MaLR -167 192 20 1 1486 26 0 0 0 chr13 118114077 118114103 -2170209 + AT_rich Low_complexity Low_complexity 1 26 0 1 1486 896 311 19 22 chr13 118114108 118114378 -2169934 - B4A SINE B4 -23 269 1 1 1486 463 299 18 6 chr13 118114387 118114555 -2169757 - L1MA9 LINE L1 -2028 4112 3943 1 1486 291 93 0 0 chr13 118114772 118114815 -2169497 + (A)n Simple_repeat Simple_repeat 1 43 0 1 1486 480 286 65 79 chr13 118114967 118115183 -2169129 + MLT1A1 LTR MaLR 184 396 -12 1 1486 354 23 0 0 chr13 118115541 118115584 -2168728 + (TG)n Simple_repeat Simple_repeat 2 44 0 1 1486 488 16 16 0 chr13 118115707 118115768 -2168544 + (TC)n Simple_repeat Simple_repeat 1 62 0 1 1486 393 22 0 0 chr13 118115768 118115814 -2168498 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1486 22 0 0 0 chr13 118116345 118116367 -2167945 + AT_rich Low_complexity Low_complexity 1 22 0 1 1486 648 292 22 0 chr13 118116462 118116599 -2167713 + RSINE1 SINE B4 10 149 -16 2 1486 180 111 0 0 chr13 118116606 118116633 -2167679 + (CA)n Simple_repeat Simple_repeat 2 28 0 2 1486 317 301 19 19 chr13 118117375 118117480 -2166832 + L1MEc LINE L1 1431 1535 -4865 2 1486 1718 125 16 78 chr13 118117500 118117821 -2166491 - ORR1A4 LTR MaLR -28 301 1 2 1486 854 245 44 18 chr13 118117821 118118054 -2166258 + ORR1D2 LTR MaLR 34 272 -98 2 1486 681 13 0 0 chr13 118118764 118118842 -2165470 + (TCTA)n Simple_repeat Simple_repeat 2 79 0 2 1486 589 268 0 110 chr13 118118842 118118997 -2165315 - B1_Mur4 SINE Alu -12 138 1 2 1486 337 211 35 46 chr13 118119035 118119209 -2165103 + CT-rich Low_complexity Low_complexity 5 176 0 2 1486 524 116 12 0 chr13 118119168 118119254 -2165058 + (TCCC)n Simple_repeat Simple_repeat 3 89 0 2 1486 306 0 0 0 chr13 118119254 118119288 -2165024 + (TTTC)n Simple_repeat Simple_repeat 4 37 0 2 1486 438 171 0 0 chr13 118119288 118119358 -2164954 + URR1B DNA MER1_type 156 225 0 2 1486 5954 105 48 11 chr13 118119519 118119750 -2164562 - Lx LINE L1 -89 6565 6301 2 1486 4893 29 27 2 chr13 118119750 118120336 -2163976 + L1Md_F3 LINE L1 5984 6584 0 2 1486 5954 120 34 8 chr13 118120336 118121388 -2162924 - Lx LINE L1 -354 6300 5244 2 1486 878 149 43 0 chr13 118121570 118121711 -2162601 - B1_Mur4 SINE Alu -3 147 1 2 1486 851 284 40 23 chr13 118121920 118122328 -2161984 + L1MA7 LINE L1 5654 6086 -103 2 1486 734 289 31 53 chr13 118122354 118122690 -2161622 - MTD LTR MaLR -100 307 1 2 1486 186 43 0 0 chr13 118123951 118123974 -2160338 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2 1486 307 345 130 17 chr13 118124033 118124210 -2160102 - MIR SINE MIR -62 200 4 2 1486 761 259 62 114 chr13 118124328 118124825 -2159487 + RLTR23 LTR ERV1 8 430 0 2 1486 238 194 0 29 chr13 118125504 118125573 -2158739 + GA-rich Low_complexity Low_complexity 2 68 0 2 1486 213 293 0 33 chr13 118125914 118125974 -2158338 + C-rich Low_complexity Low_complexity 6 63 0 2 1486 1287 313 101 64 chr13 118126483 118127336 -2156976 - ORR1E-int LTR MaLR -4 1576 1 2 1486 308 233 14 14 chr13 118127383 118127457 -2156855 - ORR1E-int LTR MaLR -1139 441 368 2 1486 439 346 22 0 chr13 118127506 118127642 -2156670 - ORR1E LTR MaLR -218 141 3 2 1486 233 361 0 0 chr13 118129659 118129720 -2154592 - MamSINE1 SINE tRNA -191 99 39 2 1486 408 315 68 14 chr13 118130673 118130809 -2153503 + RSINE1 SINE B4 3 147 -18 2 1486 261 0 0 0 chr13 118130809 118130838 -2153474 + (CA)n Simple_repeat Simple_repeat 2 30 0 2 1486 408 315 68 14 chr13 118130838 118130849 -2153463 + RSINE1 SINE B4 148 158 -7 2 1486 756 249 83 78 chr13 118130852 118131044 -2153268 + B3 SINE B2 1 193 -2 2 1486 1220 75 0 0 chr13 118131320 118131479 -2152833 - L1_Mus1 LINE L1 -1 6566 6408 2 1486 393 310 57 6 chr13 118132060 118132235 -2152077 - MER53 DNA hAT -9 184 1 2 1486 1363 86 37 0 chr13 118133041 118133228 -2151084 + B2_Mm2 SINE B2 2 195 0 2 1486 181 213 95 32 chr13 118133251 118133314 -2150998 - L3 LINE CR1 -1895 2594 2528 2 1486 25 65 0 0 chr13 118133471 118133517 -2150795 + AT_rich Low_complexity Low_complexity 1 46 0 2 1486 28 29 0 0 chr13 118134060 118134095 -2150217 + AT_rich Low_complexity Low_complexity 1 35 0 2 1486 724 259 43 43 chr13 118134544 118134754 -2149558 + B3 SINE B2 1 210 -6 2 1486 3928 74 10 10 chr13 118134930 118135449 -2148863 + Lx3_Mus LINE L1 6491 7009 0 2 1486 4283 19 0 0 chr13 118136063 118136545 -2147767 + LTRIS_Mm LTR ERV1 1 482 0 2 1486 240 161 0 0 chr13 118136812 118136874 -2147438 + T-rich Low_complexity Low_complexity 1 62 0 2 1486 289 295 103 32 chr13 118137077 118137203 -2147109 + ORR1E LTR MaLR 2 136 -223 2 1486 31 0 0 0 chr13 118137670 118137701 -2146611 + AT_rich Low_complexity Low_complexity 1 31 0 2 1486 261 83 0 0 chr13 118137844 118137880 -2146432 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 2 1486 1808 308 30 76 chr13 118137888 118138148 -2146164 - Lx8 LINE L1 -397 7299 7088 2 1486 1252 41 0 0 chr13 118138148 118138295 -2146017 - B1_Mm SINE Alu 0 147 1 2 1486 1808 304 29 80 chr13 118138295 118138965 -2145347 - Lx8 LINE L1 -375 7098 6426 2 1486 1404 239 185 6 chr13 118139144 118139691 -2144621 - L1_Mur3 LINE L1 -1506 4374 3730 2 1486 2226 38 0 0 chr13 118139708 118139972 -2144340 - L1Md_T LINE L1 -1 6581 6318 2 1486 1554 48 0 0 chr13 118139979 118140165 -2144147 - B2_Mm1a SINE B2 -6 187 2 2 1486 1380 269 45 53 chr13 118140183 118141207 -2143105 - Lx5 LINE L1 -9 7041 6632 2 1486 9092 83 4 7 chr13 118141269 118143324 -2140988 - L1_Mus1 LINE L1 0 6567 4521 2 1486 225 0 0 0 chr13 118143324 118143349 -2140963 + (TCC)n Simple_repeat Simple_repeat 2 26 0 2 1486 1526 65 8 3 chr13 118143349 118143702 -2140610 + (TTCTCC)n Simple_repeat Simple_repeat 1 354 0 2 1486 407 225 21 14 chr13 118143679 118143823 -2140489 + CT-rich Low_complexity Low_complexity 1 145 0 2 1486 32 0 0 0 chr13 118143894 118143926 -2140386 + AT_rich Low_complexity Low_complexity 1 32 0 2 1486 439 314 68 46 chr13 118144050 118144461 -2139851 - Lx5 LINE L1 -6387 1341 922 2 1486 547 315 99 55 chr13 118144755 118145027 -2139285 - B4A SINE B4 -1 291 8 2 1486 192 286 202 37 chr13 118145851 118145960 -2138352 + L2 LINE L2 2470 2596 -823 2 1486 412 68 17 0 chr13 118146190 118146249 -2138063 - MTD LTR MaLR -1 418 359 2 1486 907 106 83 42 chr13 118146253 118146421 -2137891 + B2_Mm2 SINE B2 16 190 -5 2 1486 1300 250 32 0 chr13 118146413 118146697 -2137615 - MTD LTR MaLR -59 360 68 2 1486 302 253 0 48 chr13 118147526 118147609 -2136703 - MTD LTR MaLR -340 81 3 2 1486 226 118 59 0 chr13 118147938 118147989 -2136323 + (CAA)n Simple_repeat Simple_repeat 1 54 0 2 1486 661 139 0 0 chr13 118148111 118148219 -2136093 - Lx LINE L1 -7 6647 6540 2 1486 1396 80 23 28 chr13 118148220 118148438 -2135874 + Lx2 LINE L1 6641 6857 -140 2 1486 279 0 0 0 chr13 118149341 118149372 -2134940 + (TG)n Simple_repeat Simple_repeat 2 32 0 2 1486 218 303 76 65 chr13 118149592 118149708 -2134604 - MIRc SINE MIR -98 164 48 2 1486 481 306 97 0 chr13 118150810 118150954 -2133358 - RSINE1 SINE B4 -6 159 2 2 1486 549 0 0 0 chr13 118151829 118151890 -2132422 + (TTTA)n Simple_repeat Simple_repeat 4 64 0 2 1486 1865 85 48 0 chr13 118152316 118152587 -2131725 - Lx2 LINE L1 0 6997 6714 2 1486 2594 79 53 0 chr13 118153205 118153546 -2130766 - RLTR10D LTR ERVK 0 359 1 2 1486 2341 98 0 0 chr13 118153550 118153875 -2130437 - IAP-d-int LTR ERVK -4 6538 6214 2 1486 670 131 15 76 chr13 118153868 118154000 -2130312 - IAP-d-int LTR ERVK -6416 126 3 2 1486 2589 79 53 0 chr13 118154002 118154343 -2129969 - RLTR10D LTR ERVK 0 359 1 2 1486 22 0 0 0 chr13 118154350 118154372 -2129940 + AT_rich Low_complexity Low_complexity 1 22 0 2 1486 266 301 103 46 chr13 118154827 118155001 -2129311 - L1ME1 LINE L1 -93 6086 5903 2 1486 21 0 0 0 chr13 118155081 118155102 -2129210 + AT_rich Low_complexity Low_complexity 1 21 0 2 1486 385 321 0 0 chr13 118155166 118155272 -2129040 + MTEa LTR MaLR 14 119 -260 2 1486 12357 81 37 23 chr13 118155280 118157532 -2126780 + L1VL2 LINE L1 705 2983 -632 2 1486 454 282 61 0 chr13 118157795 118157958 -2126354 - L1ME1 LINE L1 -530 5649 5477 2 1486 3668 114 64 3 chr13 118157959 118158538 -2125774 - Lx LINE L1 -3 6651 6038 2 1486 777 194 7 0 chr13 118158620 118158764 -2125548 - B1_Mus1 SINE Alu -2 146 2 2 1486 1142 191 193 22 chr13 118158849 118159170 -2125142 + MTD LTR MaLR 44 419 0 2 1486 336 292 139 97 chr13 118159188 118159654 -2124658 - L1MDa LINE L1 -1949 4588 4103 2 1486 273 276 67 33 chr13 118159778 118160130 -2124182 - L1MDa LINE L1 -3772 2765 2403 2 1486 240 253 0 0 chr13 118160150 118160225 -2124087 + (TG)n Simple_repeat Simple_repeat 1 75 0 2 1486 331 305 29 0 chr13 118160493 118160598 -2123714 - L1MEf LINE L1 -4086 2114 2007 2 1486 696 282 48 0 chr13 118160658 118160864 -2123448 - B3 SINE B2 0 216 1 2 1486 265 194 177 0 chr13 118160987 118161049 -2123263 - ID4 SINE ID -9 74 2 2 1486 41 21 0 0 chr13 118161530 118161578 -2122734 + AT_rich Low_complexity Low_complexity 1 48 0 2 1486 21683 33 1 11 chr13 118161637 118165165 -2119147 + L1Md_A LINE L1 441 3926 -1957 2 1486 5694 18 81 76 chr13 118165156 118165293 -2119019 + L1Md_A LINE L1 4728 4875 -1008 2 1486 228 183 46 77 chr13 118165293 118165358 -2118954 - RMER20A LTR ERVK -268 248 186 2 1486 5694 18 81 76 chr13 118165358 118166011 -2118301 + L1Md_A LINE L1 4876 5586 -297 2 1486 8590 28 0 0 chr13 118166011 118167007 -2117305 + L1Md_T LINE L1 5587 6582 0 2 1486 552 293 8 0 chr13 118167954 118168084 -2116228 + ID_B1 SINE B4 84 210 -14 2 1486 291 319 76 30 chr13 118168139 118168336 -2115976 + MIRb SINE MIR 25 230 -38 2 1486 201 216 19 38 chr13 118169466 118169519 -2114793 + GA-rich Low_complexity Low_complexity 4 55 0 2 1486 1635 47 0 0 chr13 118170383 118170575 -2113737 + B2_Mm1a SINE B2 1 192 -1 2 1486 667 248 22 80 chr13 118171175 118171399 -2112913 + B3 SINE B2 1 211 -5 2 1486 207 300 0 0 chr13 118171449 118171499 -2112813 + (TATG)n Simple_repeat Simple_repeat 1 50 0 2 1486 342 0 0 0 chr13 118171511 118171549 -2112763 + (TG)n Simple_repeat Simple_repeat 1 38 0 2 1486 370 186 0 85 chr13 118171549 118171678 -2112634 + Lx9 LINE L1 7519 7636 -8 2 1486 198 91 0 0 chr13 118172112 118172145 -2112167 + (T)n Simple_repeat Simple_repeat 1 33 0 2 1486 1128 242 152 75 chr13 118173113 118173736 -2110576 - RLTR18 LTR ERVK -75 541 1 2 1486 365 144 33 11 chr13 118174570 118174661 -2109651 + GA-rich Low_complexity Low_complexity 1 93 0 2 1486 987 147 0 0 chr13 118174663 118174840 -2109472 + (GA)n Simple_repeat Simple_repeat 2 178 0 2 1486 290 80 0 20 chr13 118175679 118175730 -2108582 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 2 1486 367 349 71 44 chr13 118176225 118176408 -2107904 + MER5A DNA MER1_type 2 189 0 2 1486 555 296 86 47 chr13 118176535 118176896 -2107416 - Lx9 LINE L1 -210 7434 7060 2 1486 1167 254 31 12 chr13 118176918 118177245 -2107067 - Lx9 LINE L1 -709 6935 6603 2 1486 731 324 15 45 chr13 118177322 118177652 -2106660 + Lx9 LINE L1 6320 6639 -1005 2 1486 522 195 189 89 chr13 118177994 118178253 -2106059 + RLTR9A LTR ERVK 2 286 -82 2 1486 651 60 0 0 chr13 118178932 118179016 -2105296 + (TG)n Simple_repeat Simple_repeat 1 84 0 2 1486 308 24 24 0 chr13 118179269 118179310 -2105002 + (TG)n Simple_repeat Simple_repeat 2 43 0 3 1486 5949 134 17 38 chr13 118179926 118181704 -2102608 + L1Md_F LINE L1 387 2136 -3747 3 1486 2425 94 15 50 chr13 118181689 118181753 -2102559 + L1Md_F LINE L1 5239 5292 -591 3 1486 1129 75 7 0 chr13 118181753 118181899 -2102413 + B1_Mus1 SINE Alu 2 148 0 3 1486 2425 120 16 44 chr13 118181899 118182281 -2102031 + L1Md_F LINE L1 5293 5701 -493 3 1486 268 343 19 28 chr13 118182787 118182895 -2101417 - RMER12 LTR ERVK -467 855 749 3 1486 302 260 40 0 chr13 118182901 118183001 -2101311 - L1MA4A LINE L1 -405 5898 5795 3 1486 804 50 0 0 chr13 118183793 118183894 -2100418 + (TCCC)n Simple_repeat Simple_repeat 2 102 0 3 1486 321 100 0 0 chr13 118184048 118184098 -2100214 + (TG)n Simple_repeat Simple_repeat 1 50 0 3 1486 425 338 58 12 chr13 118184104 118184283 -2100029 - B4A SINE B4 -4 288 91 3 1486 322 330 0 28 chr13 118184349 118184455 -2099857 + PB1D10 SINE Alu 3 105 -12 3 1486 30 59 0 0 chr13 118184941 118184992 -2099320 + AT_rich Low_complexity Low_complexity 1 51 0 3 1486 678 279 7 0 chr13 118186193 118186333 -2097979 + B1_Mur2 SINE Alu 8 148 -1 3 1486 238 140 0 50 chr13 118186390 118186450 -2097862 + (CATATA)n Simple_repeat Simple_repeat 2 58 0 3 1486 549 0 0 0 chr13 118186876 118186937 -2097375 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1486 182 62 31 0 chr13 118187038 118187070 -2097242 + (CAAAAA)n Simple_repeat Simple_repeat 3 35 0 3 1486 189 74 0 0 chr13 118187071 118187098 -2097214 + (CCA)n Simple_repeat Simple_repeat 1 27 0 3 1486 293 306 66 60 chr13 118187910 118188077 -2096235 - MamRep605 Unknown Unknown -147 729 562 3 1486 503 344 0 6 chr13 118188455 118188619 -2095693 - RSINE1 SINE B4 0 165 3 3 1486 582 103 0 0 chr13 118189066 118189153 -2095159 + (CA)n Simple_repeat Simple_repeat 2 88 0 3 1486 292 304 0 68 chr13 118189155 118189229 -2095083 + ID4_ SINE ID 5 73 -10 3 1486 462 65 0 0 chr13 118189235 118189297 -2095015 + (CA)n Simple_repeat Simple_repeat 1 62 0 3 1486 23 54 0 0 chr13 118189714 118189751 -2094561 + AT_rich Low_complexity Low_complexity 1 37 0 3 1486 493 111 42 36 chr13 118191099 118191267 -2093045 + (CAGA)n Simple_repeat Simple_repeat 2 170 0 3 1486 213 320 124 48 chr13 118191721 118191826 -2092486 - PB1 SINE Alu -7 120 8 3 1486 758 294 51 0 chr13 118191833 118192047 -2092265 - B4A SINE B4 -67 225 1 3 1486 21 0 0 0 chr13 118192119 118192140 -2092172 + AT_rich Low_complexity Low_complexity 1 21 0 3 1486 1091 77 0 27 chr13 118192329 118192475 -2091837 - B1_Mus2 SINE Alu -5 142 1 3 1486 232 284 103 18 chr13 118192478 118192643 -2091669 - L1M4 LINE L1 -3236 2910 2732 3 1486 245 319 97 0 chr13 118192969 118193082 -2091230 - MLT1H LTR MaLR -348 201 78 3 1486 299 214 0 23 chr13 118193425 118193511 -2090801 + (TATG)n Simple_repeat Simple_repeat 3 86 0 3 1486 405 268 78 47 chr13 118193511 118193596 -2090716 - L1MD LINE L1 -2541 5454 5366 3 1486 186 103 0 0 chr13 118193596 118193625 -2090687 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1486 405 268 78 47 chr13 118193625 118193731 -2090581 - L1MD LINE L1 -2630 5365 5257 3 1486 27 49 0 0 chr13 118193928 118193969 -2090343 + AT_rich Low_complexity Low_complexity 1 41 0 3 1486 828 202 110 22 chr13 118194042 118194061 -2090251 - B3A SINE B2 0 198 182 3 1486 180 0 0 0 chr13 118194061 118194081 -2090231 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 3 1486 1321 56 0 0 chr13 118194081 118194243 -2090069 - B2_Mm2 SINE B2 -33 162 1 3 1486 273 326 144 16 chr13 118195295 118195419 -2088893 + Lx8 LINE L1 7197 7331 -142 3 1486 405 0 0 0 chr13 118195419 118195464 -2088848 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1486 273 326 144 16 chr13 118195464 118195582 -2088730 + Lx8 LINE L1 7332 7470 -3 3 1486 5235 170 71 32 chr13 118195901 118197097 -2087215 - ORR1B1-int LTR MaLR -186 1777 723 3 1486 1132 150 171 73 chr13 118197052 118197326 -2086986 - MT2B LTR ERVL -300 301 1 3 1486 1987 220 117 40 chr13 118197326 118197943 -2086369 - ORR1B1-int LTR MaLR -1355 608 2 3 1486 1975 181 11 25 chr13 118197945 118198303 -2086009 - ORR1B1 LTR MaLR -1 393 41 3 1486 249 303 0 13 chr13 118199695 118199772 -2084540 + CT-rich Low_complexity Low_complexity 2 77 0 3 1486 436 321 7 28 chr13 118200534 118200675 -2083637 + RSINE1 SINE B4 13 150 -15 3 1486 614 270 22 33 chr13 118200787 118200971 -2083341 - B3A SINE B2 -12 186 5 3 1486 2687 203 60 43 chr13 118200987 118201789 -2082523 + RLTR40 LTR ERVK 1 739 -78 3 1486 28 0 0 0 chr13 118202039 118202067 -2082245 + AT_rich Low_complexity Low_complexity 1 28 0 3 1486 7786 67 21 5 chr13 118203528 118204058 -2080254 - RLTR13D5 LTR ERVK 0 1023 485 3 1486 315 0 0 0 chr13 118204058 118204093 -2080219 + (TG)n Simple_repeat Simple_repeat 1 35 0 3 1486 7786 67 21 5 chr13 118204093 118204569 -2079743 - RLTR13D5 LTR ERVK -539 484 3 3 1486 674 49 0 19 chr13 118204786 118204890 -2079422 + L1Md_F3 LINE L1 6470 6571 -13 3 1486 180 77 0 0 chr13 118205340 118205366 -2078946 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 3 1486 25 51 0 0 chr13 118205943 118205982 -2078330 + AT_rich Low_complexity Low_complexity 1 39 0 3 1486 296 261 0 55 chr13 118206808 118206881 -2077431 + RSINE1 SINE B4 69 137 -28 3 1486 3112 142 29 6 chr13 118206947 118207458 -2076854 - RLTR12B LTR ERVK 0 528 6 3 1486 26 30 0 0 chr13 118208143 118208176 -2076136 + AT_rich Low_complexity Low_complexity 1 33 0 3 1486 570 13 38 0 chr13 118208176 118208255 -2076057 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 3 1486 347 281 27 164 chr13 118208774 118208957 -2075355 + RSINE1 SINE B4 6 163 -2 3 1486 23 0 0 0 chr13 118209254 118209277 -2075035 + AT_rich Low_complexity Low_complexity 1 23 0 3 1486 687 103 25 31 chr13 118209697 118209858 -2074454 + (TCTA)n Simple_repeat Simple_repeat 2 161 0 3 1486 1516 241 99 8 chr13 118209923 118210307 -2074005 + MTD LTR MaLR 1 419 0 3 1486 563 304 169 25 chr13 118210353 118210721 -2073591 - Lx8 LINE L1 -146 7327 6907 3 1486 1177 75 0 0 chr13 118210922 118211083 -2073229 - L1_Mus2 LINE L1 -1 6565 6405 3 1486 1109 105 23 12 chr13 118211116 118211289 -2073023 - B2_Mm1t SINE B2 -9 184 10 3 1486 4071 239 35 90 chr13 118213513 118215257 -2069055 - RMER1A Other Other -10 1020 10 3 1486 318 26 0 0 chr13 118216037 118216076 -2068236 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1486 189 0 0 0 chr13 118216271 118216292 -2068020 + (A)n Simple_repeat Simple_repeat 1 21 0 3 1486 783 162 11 17 chr13 118217562 118217738 -2066574 + CT-rich Low_complexity Low_complexity 1 175 0 3 1486 207 0 0 0 chr13 118217751 118217774 -2066538 + (T)n Simple_repeat Simple_repeat 1 23 0 3 1486 2811 47 6 0 chr13 118217833 118218177 -2066135 + ORR1A1 LTR MaLR 1 346 0 3 1486 3173 164 29 8 chr13 118218177 118218949 -2065363 + RMER13B LTR ERVK 6 871 -37 3 1486 264 191 0 0 chr13 118219029 118219076 -2065236 - B4 SINE B4 -220 72 26 3 1486 198 0 0 0 chr13 118219529 118219551 -2064761 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1486 3155 165 2 7 chr13 118219997 118220546 -2063766 + Lx LINE L1 6102 6647 -7 3 1486 288 77 0 0 chr13 118220609 118220648 -2063664 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 3 1486 273 331 127 66 chr13 118223210 118223469 -2060843 + B4A SINE B4 1 275 -17 3 1486 244 179 0 0 chr13 118223870 118223926 -2060386 - Lx LINE L1 -2 7471 7416 3 1486 716 198 137 42 chr13 118224602 118224792 -2059520 + B3 SINE B2 1 208 -8 3 1486 180 77 0 0 chr13 118224792 118224818 -2059494 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1486 1587 140 10 5 chr13 118224866 118225115 -2059197 - RLTR12B LTR ERVK -5 563 282 3 1486 2164 129 29 37 chr13 118225115 118225494 -2058818 - Lx LINE L1 -3 6651 6276 3 1486 1587 253 80 8 chr13 118225494 118225761 -2058551 - RLTR12B LTR ERVK -247 281 4 3 1486 653 224 8 8 chr13 118225852 118225978 -2058334 - B1_Mur1 SINE Alu -1 148 23 3 1486 27 49 0 0 chr13 118226523 118226564 -2057748 + AT_rich Low_complexity Low_complexity 1 41 0 3 1487 722 299 6 0 chr13 118227254 118227411 -2056901 + B3A SINE B2 5 162 -36 3 1487 456 51 0 0 chr13 118227957 118228016 -2056296 + (CA)n Simple_repeat Simple_repeat 2 60 0 3 1487 500 111 10 0 chr13 118228016 118228115 -2056197 + (GA)n Simple_repeat Simple_repeat 1 100 0 3 1487 198 0 0 0 chr13 118228886 118228908 -2055404 + (CAAAC)n Simple_repeat Simple_repeat 2 23 0 3 1487 801 318 98 62 chr13 118229092 118229775 -2054537 - Charlie1 DNA MER1_type -5 2776 2069 3 1487 533 233 194 54 chr13 118229776 118229998 -2054314 - RLTR10A LTR ERVK -19 392 140 3 1487 1310 275 86 68 chr13 118230034 118231077 -2053235 - IAP-d-int LTR ERVK -256 1731 992 3 1487 648 317 43 39 chr13 118231095 118232325 -2051987 - IAP-d-int LTR ERVK -2041 4501 3511 3 1487 1698 270 43 35 chr13 118232369 118233198 -2051114 - IAP-d-int LTR ERVK -3574 2968 2133 3 1487 407 182 52 43 chr13 118233878 118233993 -2050319 - RLTR10-int LTR ERVK -1554 433 318 3 1487 642 224 183 50 chr13 118234009 118234249 -2050063 - RLTR10A LTR ERVK 0 411 140 3 1487 600 320 95 62 chr13 118234301 118234817 -2049495 - Charlie1 DNA MER1_type -729 2052 1520 3 1487 204 151 55 36 chr13 118234886 118234941 -2049371 + (TATAA)n Simple_repeat Simple_repeat 4 59 0 3 1487 212 200 0 14 chr13 118237114 118237185 -2047127 + (TA)n Simple_repeat Simple_repeat 2 71 0 3 1487 4057 117 71 14 chr13 118238500 118239166 -2045146 - Lx2B LINE L1 -5 6995 6292 3 1487 7298 65 5 7 chr13 118239167 118240245 -2044067 - L1Md_F2 LINE L1 0 6582 5507 3 1487 8562 71 46 1 chr13 118240234 118240555 -2043757 + L1_Mm LINE L1 1648 1981 -3902 3 1487 210 37 0 0 chr13 118240555 118240582 -2043730 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 3 1487 8562 71 46 1 chr13 118240582 118241524 -2042788 + L1_Mm LINE L1 1982 2967 -2916 3 1487 1035 145 0 92 chr13 118241522 118241703 -2042609 - Lx2B LINE L1 -695 6305 6141 3 1487 1030 88 0 0 chr13 118241703 118241850 -2042462 - L1Md_F2 LINE L1 -6 6576 6430 3 1487 1035 145 0 92 chr13 118241850 118241896 -2042416 - Lx2B LINE L1 -860 6140 6099 3 1487 240 35 0 0 chr13 118242171 118242200 -2042112 + (TG)n Simple_repeat Simple_repeat 2 30 0 3 1487 361 279 126 37 chr13 118242348 118242590 -2041722 - L1M4c LINE L1 -3853 2791 2533 3 1487 477 97 0 0 chr13 118242710 118242782 -2041530 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 1487 360 373 47 51 chr13 118243074 118243543 -2040769 - Lx8 LINE L1 -8 7465 6999 3 1487 1731 237 20 0 chr13 118243543 118243889 -2040423 - MTD LTR MaLR -54 365 13 3 1487 182 247 99 49 chr13 118244126 118244207 -2040105 - L3 LINE CR1 -2782 1707 1623 3 1487 390 194 82 18 chr13 118244278 118244388 -2039924 - Lx8 LINE L1 -459 7014 6898 3 1487 249 286 26 87 chr13 118244614 118244729 -2039583 - L1M4c LINE L1 -6170 372 265 3 1487 2622 34 31 76 chr13 118246172 118246554 -2037758 - RLTR10B2 LTR ERVK 0 365 1 3 1487 3781 57 6 0 chr13 118248408 118248880 -2035432 - MT2C_Mm LTR ERVL 0 475 1 4 1487 1225 261 109 16 chr13 118248915 118249301 -2035011 - Lx6 LINE L1 -27 7433 7012 4 1487 386 186 0 11 chr13 118249336 118249423 -2034889 + (CAA)n Simple_repeat Simple_repeat 3 88 0 4 1487 1401 241 77 10 chr13 118250104 118250507 -2033805 + Lx7 LINE L1 6160 6589 -1107 4 1487 1732 245 49 2 chr13 118250505 118250955 -2033357 + Lx7 LINE L1 6757 7227 -469 4 1487 7955 144 17 52 chr13 118250965 118252232 -2032080 - Lx4B LINE L1 0 7058 5824 4 1487 1220 54 0 0 chr13 118252232 118252379 -2031933 - B1_Mus1 SINE Alu 0 148 2 4 1487 7955 124 29 41 chr13 118252379 118253385 -2030927 - Lx4B LINE L1 -40 5837 4804 4 1487 267 171 97 77 chr13 118253410 118253606 -2030706 + Lx7 LINE L1 7375 7574 -122 4 1487 25 65 0 0 chr13 118253606 118253652 -2030660 + AT_rich Low_complexity Low_complexity 1 46 0 4 1487 392 217 102 151 chr13 118254158 118254364 -2029948 + MLT1B LTR MaLR 58 253 -137 4 1487 231 152 0 0 chr13 118254364 118254410 -2029902 + (CAGAGA)n Simple_repeat Simple_repeat 1 46 0 4 1487 349 270 105 70 chr13 118254413 118254643 -2029669 + MLT1C LTR MaLR 165 467 0 4 1487 3732 119 26 24 chr13 118254860 118255446 -2028866 - Lx2 LINE L1 0 6997 6411 4 1487 321 26 0 0 chr13 118255854 118255892 -2028420 + (CA)n Simple_repeat Simple_repeat 1 38 0 4 1487 198 91 0 0 chr13 118256199 118256232 -2028080 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1487 1465 124 8 11 chr13 118257351 118257612 -2026700 + Lx LINE L1 6395 6654 0 4 1487 25 31 0 0 chr13 118258409 118258441 -2025871 + AT_rich Low_complexity Low_complexity 1 32 0 4 1487 944 150 15 51 chr13 118258676 118258873 -2025439 - B2_Mm2 SINE B2 -4 191 2 4 1487 350 291 41 34 chr13 118259238 118259384 -2024928 - L1_Rod LINE L1 -675 5172 5026 4 1487 332 83 34 45 chr13 118259390 118259478 -2024834 + (CAAA)n Simple_repeat Simple_repeat 2 88 0 4 1487 486 286 5 21 chr13 118259543 118259732 -2024580 - L1_Rod LINE L1 -870 4977 4792 4 1487 444 37 0 0 chr13 118260227 118260281 -2024031 + (TATG)n Simple_repeat Simple_repeat 3 56 0 4 1487 444 306 19 79 chr13 118261608 118261824 -2022488 - B4A SINE B4 -26 266 64 4 1487 423 0 0 0 chr13 118261995 118262042 -2022270 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 4 1487 4301 173 53 6 chr13 118262152 118263006 -2021306 - Lx5 LINE L1 -438 6612 5719 4 1487 2140 148 119 0 chr13 118263004 118263424 -2020888 + L1_Mur2 LINE L1 5014 5483 -394 4 1487 2928 246 56 66 chr13 118263388 118263537 -2020775 - Lx7 LINE L1 -241 7455 7302 4 1487 3922 72 0 53 chr13 118263537 118264107 -2020205 + L1Md_F2 LINE L1 6032 6571 -11 4 1487 2928 246 56 66 chr13 118264107 118264311 -2020001 - Lx7 LINE L1 -395 7301 7117 4 1487 225 94 0 0 chr13 118264311 118264343 -2019969 + (CA)n Simple_repeat Simple_repeat 1 32 0 4 1487 2928 246 56 66 chr13 118264343 118264361 -2019951 - Lx7 LINE L1 -580 7116 7113 4 1487 591 15 0 0 chr13 118264361 118264429 -2019883 + (GA)n Simple_repeat Simple_repeat 1 68 0 4 1487 2928 246 56 66 chr13 118264429 118265089 -2019223 - Lx7 LINE L1 -584 7112 6433 4 1487 1087 131 0 11 chr13 118265109 118265286 -2019026 - L1Md_F2 LINE L1 -17 6565 6391 4 1487 1272 132 18 35 chr13 118265272 118265499 -2018813 + Lx LINE L1 6424 6646 -8 4 1487 1969 212 21 43 chr13 118265555 118266113 -2018199 - L1_Mur3 LINE L1 -600 5280 4735 4 1487 783 180 38 6 chr13 118266127 118266311 -2018001 - L1_Mur3 LINE L1 -3143 2737 2554 4 1487 3228 178 66 21 chr13 118266409 118267845 -2016467 - L1_Mur3 LINE L1 -3843 2037 545 4 1487 32 43 0 0 chr13 118268137 118268183 -2016129 + AT_rich Low_complexity Low_complexity 1 46 0 4 1487 237 33 0 0 chr13 118269853 118269883 -2014429 + (TG)n Simple_repeat Simple_repeat 1 30 0 4 1487 565 294 8 8 chr13 118269900 118270027 -2014285 - RSINE1 SINE B4 -31 134 8 4 1487 377 151 108 0 chr13 118270054 118270147 -2014165 + Lx9 LINE L1 7519 7621 -23 4 1487 21 36 0 0 chr13 118270418 118270446 -2013866 + AT_rich Low_complexity Low_complexity 1 28 0 4 1487 188 86 0 28 chr13 118271750 118271786 -2012526 + (TG)n Simple_repeat Simple_repeat 2 36 0 4 1487 31 0 0 0 chr13 118272528 118272559 -2011753 + AT_rich Low_complexity Low_complexity 1 31 0 4 1487 7999 38 2 0 chr13 118272559 118274239 -2010073 - L1Md_F2 LINE L1 -14 6568 4886 4 1487 1312 60 55 0 chr13 118274258 118274441 -2009871 - L1Md_F2 LINE L1 -12 6570 6378 4 1487 761 249 76 45 chr13 118275087 118275414 -2008898 + RMER19C LTR ERVK 1 292 -445 4 1487 236 320 56 32 chr13 118275435 118275561 -2008751 + RMER19C LTR ERVK 222 350 -387 4 1487 1183 202 35 8 chr13 118275579 118275834 -2008478 - Lx9 LINE L1 -339 7305 7044 4 1487 2220 284 31 7 chr13 118276199 118276897 -2007415 - Lx8 LINE L1 -378 7095 6381 4 1487 306 0 0 0 chr13 118277162 118277196 -2007116 + (TG)n Simple_repeat Simple_repeat 1 34 0 4 1487 241 122 0 143 chr13 118278003 118278108 -2006204 - RMER17C LTR ERVK -140 270 181 4 1487 321 118 0 0 chr13 118278280 118278331 -2005981 + (TG)n Simple_repeat Simple_repeat 2 52 0 4 1487 483 18 0 0 chr13 118278975 118279031 -2005281 + (TCTA)n Simple_repeat Simple_repeat 2 57 0 4 1487 600 338 7 7 chr13 118279050 118279196 -2005116 - RSINE1 SINE B4 -17 148 3 4 1487 23 54 0 0 chr13 118279912 118279949 -2004363 + AT_rich Low_complexity Low_complexity 1 37 0 4 1487 511 109 132 16 chr13 118279987 118280108 -2004204 + Lx3_Mus LINE L1 6875 7009 0 4 1487 896 64 0 0 chr13 118280204 118280313 -2003999 - Lx3_Mus LINE L1 -139 6870 6762 4 1487 26 50 0 0 chr13 118280473 118280513 -2003799 + AT_rich Low_complexity Low_complexity 1 40 0 4 1487 251 213 115 0 chr13 118280647 118280708 -2003604 - RMER15 LTR ERVL -105 470 403 4 1487 2592 316 48 11 chr13 118280735 118281689 -2002623 - Lx8 LINE L1 -248 7225 6236 4 1487 583 318 117 47 chr13 118281745 118282274 -2002038 - Charlie1 DNA MER1_type -15 2766 2201 4 1487 608 249 36 14 chr13 118282300 118282520 -2001792 - L1MA6 LINE L1 -16 6284 6060 4 1487 330 283 20 0 chr13 118282543 118282642 -2001670 + L1M2 LINE L1 5639 5739 -552 4 1487 531 0 0 0 chr13 118282801 118282860 -2001452 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 4 1487 320 337 26 31 chr13 118282885 118283078 -2001234 - Lx9 LINE L1 -183 7461 7270 4 1487 385 284 0 0 chr13 118283102 118283190 -2001122 - Charlie1 DNA MER1_type -594 2187 2100 4 1487 2488 294 59 17 chr13 118284264 118285134 -1999178 + Lx7 LINE L1 6112 7017 -679 4 1487 1077 72 0 0 chr13 118285474 118285626 -1998686 + (CA)n Simple_repeat Simple_repeat 2 153 0 4 1487 335 254 9 35 chr13 118285761 118285875 -1998437 + Lx9 LINE L1 7533 7643 -1 4 1487 1544 144 0 0 chr13 118286822 118287065 -1997247 - Lx LINE L1 -5 6649 6407 4 1487 686 129 0 0 chr13 118287065 118287166 -1997146 - Lx LINE L1 -571 6083 5983 4 1487 4925 66 3 1 chr13 118287272 118288031 -1996281 + L1_Mus1 LINE L1 5202 5962 -605 4 1487 3734 64 4 8 chr13 118288031 118288699 -1995613 + L1_Mus1 LINE L1 6081 6567 0 4 1487 21 36 0 0 chr13 118289305 118289333 -1994979 + AT_rich Low_complexity Low_complexity 1 28 0 4 1487 3158 179 116 15 chr13 118289695 118290024 -1994288 - RMER6D LTR ERVK 0 720 370 4 1487 180 0 0 0 chr13 118290024 118290044 -1994268 + (CCA)n Simple_repeat Simple_repeat 3 22 0 4 1487 3158 179 116 15 chr13 118290044 118290368 -1993944 - RMER6D LTR ERVK -351 369 1 4 1487 236 228 25 25 chr13 118290450 118290531 -1993781 + L1MD LINE L1 3650 3730 -2416 4 1487 207 0 0 0 chr13 118290579 118290602 -1993710 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4 1487 339 298 78 123 chr13 118291376 118291644 -1992668 + MLT2B3 LTR ERVL 107 362 -192 4 1487 471 113 0 0 chr13 118291685 118291756 -1992556 + (TTA)n Simple_repeat Simple_repeat 2 72 0 4 1487 3581 235 75 13 chr13 118292270 118293220 -1991092 - RMER1A Other Other -14 1016 120 4 1487 3300 56 0 23 chr13 118293589 118294030 -1990282 - L1Md_F2 LINE L1 -1 6581 6151 4 1487 2093 126 3 6 chr13 118294401 118294713 -1989599 - RLTR10E LTR ERVK 0 311 1 4 1487 360 0 0 0 chr13 118298027 118298067 -1986245 + (TC)n Simple_repeat Simple_repeat 1 40 0 4 1487 285 29 0 0 chr13 118298593 118298627 -1985685 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 4 1487 1818 156 22 9 chr13 118299534 118299857 -1984455 + ORR1A2 LTR MaLR 1 327 0 4 1487 208 158 17 17 chr13 118301249 118301307 -1983005 + (TA)n Simple_repeat Simple_repeat 2 59 0 4 1487 1338 140 23 0 chr13 118301531 118301752 -1982560 - URR1A DNA MER1_type 0 226 1 4 1487 423 232 0 0 chr13 118302247 118302342 -1981970 - L1MC3 LINE L1 -185 7600 7506 4 1487 24 32 0 0 chr13 118303357 118303388 -1980924 + AT_rich Low_complexity Low_complexity 1 31 0 4 1487 903 178 0 0 chr13 118303388 118303562 -1980750 + (TA)n Simple_repeat Simple_repeat 1 174 0 4 1487 4568 232 94 22 chr13 118303814 118303892 -1980420 + Lx9 LINE L1 6325 6400 -1244 4 1487 387 0 0 0 chr13 118303892 118303935 -1980377 + (CAAA)n Simple_repeat Simple_repeat 3 45 0 4 1487 4568 232 94 22 chr13 118303935 118305087 -1979225 + Lx9 LINE L1 6401 7643 -1 4 1487 233 111 44 0 chr13 118305188 118305233 -1979079 + (TCTCTG)n Simple_repeat Simple_repeat 2 48 0 4 1487 3298 139 13 2 chr13 118305863 118306397 -1977915 + Lx3A LINE L1 6441 6980 -1 4 1487 24 32 0 0 chr13 118308040 118308071 -1976241 + AT_rich Low_complexity Low_complexity 1 31 0 4 1487 262 312 174 37 chr13 118308438 118308821 -1975491 - HAL1 LINE L1 -593 1914 1480 4 1487 7410 130 70 4 chr13 118309076 118310869 -1973443 + Lx LINE L1 4701 6647 -7 4 1487 533 345 139 30 chr13 118310928 118311974 -1972338 - L1MC3 LINE L1 -881 6904 5745 4 1487 276 254 65 27 chr13 118312160 118312346 -1971966 - RMER17D LTR ERVK -494 395 203 4 1487 1610 326 91 19 chr13 118312356 118313166 -1971146 - Lx9 LINE L1 -287 7357 6489 4 1487 259 300 110 10 chr13 118313318 118313527 -1970785 - L1MC3 LINE L1 -2275 5510 5281 4 1487 360 0 0 0 chr13 118313811 118313851 -1970461 + (CA)n Simple_repeat Simple_repeat 2 41 0 4 1487 2142 70 0 14 chr13 118314284 118314572 -1969740 + L1_Mus2 LINE L1 6279 6562 -4 4 1487 968 187 21 21 chr13 118316177 118316412 -1967900 + Lx3C LINE L1 6740 6974 -2 4 1487 405 0 0 0 chr13 118316496 118316541 -1967771 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 4 1487 1095 163 244 23 chr13 118316542 118316899 -1967413 - RMER5 LTR ERV1 -32 502 67 4 1487 364 244 168 0 chr13 118317025 118317144 -1967168 + ID_B1 SINE B4 78 216 -8 4 1487 4558 80 36 6 chr13 118317248 118317892 -1966420 - Lx3_Mus LINE L1 -8 7001 6339 4 1487 4299 94 5 2 chr13 118317892 118318489 -1965823 + L1_Mur1 LINE L1 5182 5780 -106 4 1487 376 325 0 0 chr13 118318528 118318642 -1965670 + B3A SINE B2 1 114 -84 4 1487 512 306 165 28 chr13 118318796 118319009 -1965303 + Lx9 LINE L1 4546 4779 -1364 5 1487 558 0 0 0 chr13 118319009 118319071 -1965241 + (GA)n Simple_repeat Simple_repeat 1 62 0 5 1487 512 301 148 34 chr13 118319071 118320073 -1964239 + Lx9 LINE L1 4725 5926 -374 5 1487 1061 63 45 12 chr13 118320087 118320331 -1963981 + (TCTA)n Simple_repeat Simple_repeat 1 252 0 5 1487 194 139 47 0 chr13 118320397 118320440 -1963872 + (TCTG)n Simple_repeat Simple_repeat 4 48 0 5 1487 463 330 42 9 chr13 118320824 118321038 -1963274 - L1MCa LINE L1 -6286 222 2 5 1487 3694 234 72 98 chr13 118321205 118321952 -1962360 + Lx9 LINE L1 6093 6885 -759 5 1487 1717 178 61 58 chr13 118321952 118322329 -1961983 + ORR1C1 LTR MaLR 1 378 0 5 1487 3694 234 72 98 chr13 118322329 118322848 -1961464 + Lx9 LINE L1 6886 7326 -318 5 1487 367 248 46 0 chr13 118322885 118322994 -1961318 - L1MC1 LINE L1 -334 5999 5886 5 1487 265 242 0 0 chr13 118323104 118323166 -1961146 - L1MD LINE L1 -2433 5562 5501 5 1487 237 314 105 29 chr13 118323599 118323704 -1960608 + PB1D10 SINE Alu 5 117 0 5 1487 183 80 0 0 chr13 118323718 118323743 -1960569 + (TA)n Simple_repeat Simple_repeat 2 26 0 5 1487 1293 223 4 201 chr13 118323906 118324383 -1959929 + RMER19C LTR ERVK 1 383 -228 5 1487 325 285 124 70 chr13 118324701 118324886 -1959426 - MLT1D LTR MaLR -306 199 5 5 1487 260 292 59 89 chr13 118325282 118325541 -1958771 + MLT1F1 LTR MaLR 219 569 0 5 1487 22 0 0 0 chr13 118325567 118325589 -1958723 + AT_rich Low_complexity Low_complexity 1 22 0 5 1487 2559 60 0 0 chr13 118326215 118326566 -1957746 - L1_Mus1 LINE L1 0 6567 6245 5 1487 410 0 20 0 chr13 118326792 118326842 -1957470 + (CA)n Simple_repeat Simple_repeat 2 52 0 5 1487 246 287 0 0 chr13 118327988 118328075 -1956237 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 5 1487 1311 115 0 0 chr13 118329229 118329420 -1954892 + MTB_Mm LTR MaLR 1 191 -216 5 1487 5195 92 19 9 chr13 118329420 118330176 -1954136 + Lx LINE L1 5888 6650 -4 5 1487 28179 45 0 1 chr13 118330203 118335332 -1948980 - L1Md_F3 LINE L1 -14 6570 1449 5 1487 186 43 0 0 chr13 118335332 118335355 -1948957 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 5 1487 28179 143 13 3 chr13 118335355 118336594 -1947718 - L1Md_F3 LINE L1 -4435 1448 239 5 1487 333 0 0 0 chr13 118337376 118337413 -1946899 + (TTTA)n Simple_repeat Simple_repeat 4 40 0 5 1487 4603 109 17 7 chr13 118337413 118338108 -1946204 - Lx3A LINE L1 -15 6966 6265 5 1487 381 22 0 0 chr13 118339548 118339594 -1944718 + (TG)n Simple_repeat Simple_repeat 2 47 0 5 1487 229 257 38 44 chr13 118339620 118339779 -1944533 + (TATG)n Simple_repeat Simple_repeat 1 158 0 5 1487 263 122 20 0 chr13 118339786 118339835 -1944477 + (TG)n Simple_repeat Simple_repeat 1 50 0 5 1487 284 327 46 37 chr13 118341333 118341441 -1942871 - MLT1N2 LTR MaLR -430 132 24 5 1487 326 188 54 6 chr13 118341472 118341638 -1942674 + (TG)n Simple_repeat Simple_repeat 2 175 0 5 1487 369 332 56 60 chr13 118341784 118341999 -1942313 + Tigger13a DNA MER2_type 400 613 -158 5 1487 318 50 0 0 chr13 118343499 118343539 -1940773 + (TA)n Simple_repeat Simple_repeat 2 41 0 5 1487 315 347 40 26 chr13 118343751 118343979 -1940333 - L1ME1 LINE L1 -308 5871 5641 5 1487 24 0 0 0 chr13 118344198 118344222 -1940090 + AT_rich Low_complexity Low_complexity 1 24 0 5 1487 21 36 0 0 chr13 118344388 118344416 -1939896 + AT_rich Low_complexity Low_complexity 1 28 0 5 1487 285 332 123 37 chr13 118346558 118346692 -1937620 - B4A SINE B4 0 292 130 5 1487 225 0 0 0 chr13 118346692 118346717 -1937595 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5 1487 285 332 123 37 chr13 118346717 118346851 -1937461 - B4A SINE B4 -163 129 1 5 1487 21 36 0 0 chr13 118348005 118348033 -1936279 + AT_rich Low_complexity Low_complexity 1 28 0 5 1487 24 32 0 0 chr13 118348907 118348938 -1935374 + AT_rich Low_complexity Low_complexity 1 31 0 5 1487 2137 299 156 18 chr13 118349309 118350424 -1933888 - Lx8 LINE L1 -9 7464 6196 5 1487 3718 190 83 40 chr13 118350516 118351873 -1932439 + L1_Mur3 LINE L1 334 1738 -4142 5 1487 1344 199 19 8 chr13 118351885 118352143 -1932169 - RLTR24 LTR ERV1 0 529 269 5 1487 678 31 0 67 chr13 118352231 118352335 -1931977 - L1_Mus1 LINE L1 0 6567 6471 5 1487 1435 156 6 135 chr13 118352547 118352873 -1931439 - RLTR24 LTR ERV1 -245 284 1 5 1487 1341 179 48 25 chr13 118352873 118353188 -1931124 + L1_Mur3 LINE L1 1747 2068 -3812 5 1487 643 179 24 16 chr13 118353227 118353352 -1930960 - RLTR24 LTR ERV1 -238 291 166 5 1487 297 229 13 67 chr13 118353352 118353427 -1930885 - RLTR24 LTR ERV1 -323 206 136 5 1487 403 241 52 26 chr13 118353584 118353699 -1930613 + RLTR20C LTR ERVK 417 534 0 5 1487 1483 147 73 13 chr13 118353809 118354112 -1930200 - L1_Mur3 LINE L1 -3474 2406 2086 5 1487 1666 95 15 22 chr13 118354124 118354392 -1929920 - Lx3A LINE L1 -672 6309 6044 5 1487 1347 234 261 10 chr13 118354383 118354904 -1929408 + Lx6 LINE L1 6324 6975 -485 5 1487 429 179 0 0 chr13 118357052 118357136 -1927176 + (CGTG)n Simple_repeat Simple_repeat 1 84 0 5 1487 204 97 0 0 chr13 118357756 118357787 -1926525 + (TA)n Simple_repeat Simple_repeat 2 32 0 5 1487 315 0 0 0 chr13 118357787 118357821 -1926491 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1488 4553 112 38 1 chr13 118358483 118359174 -1925138 - Lx2A LINE L1 0 7008 6293 5 1488 24 0 0 0 chr13 118361285 118361309 -1923003 + AT_rich Low_complexity Low_complexity 1 24 0 5 1488 262 273 0 0 chr13 118361684 118361739 -1922573 - B1F1 SINE Alu -86 63 9 5 1488 198 0 0 0 chr13 118362396 118362418 -1921894 + (TTTTG)n Simple_repeat Simple_repeat 1 22 0 5 1488 1010 118 7 0 chr13 118362419 118362563 -1921749 - B1_Mm SINE Alu -1 146 2 5 1488 5138 43 0 0 chr13 118362890 118363513 -1920799 - L1Md_F2 LINE L1 0 6582 5960 5 1488 568 109 9 43 chr13 118363589 118363704 -1920608 + Lx2 LINE L1 6886 6996 -1 5 1488 264 304 9 9 chr13 118363731 118363844 -1920468 - L1MCa LINE L1 -4718 1790 1678 5 1488 1778 164 11 42 chr13 118363896 118364288 -1920024 + RMER6A LTR ERVK 392 748 -8 5 1488 707 271 68 27 chr13 118364294 118364514 -1919798 - MTD LTR MaLR -190 229 1 5 1488 1703 323 68 29 chr13 118364546 118365479 -1918833 + ORR1D2-int LTR MaLR 2 1370 0 5 1488 993 287 32 63 chr13 118365482 118365861 -1918451 + ORR1D2 LTR MaLR 4 370 0 5 1488 339 65 0 0 chr13 118367118 118367164 -1917148 + (T)n Simple_repeat Simple_repeat 1 46 0 5 1488 303 321 9 19 chr13 118367642 118367750 -1916562 + GA-rich Low_complexity Low_complexity 2 108 0 5 1488 2777 36 62 0 chr13 118367894 118368230 -1916082 + IAPEY2_LTR LTR ERVK 1 357 0 5 1488 282 375 93 48 chr13 118368246 118368602 -1915710 + L2 LINE L2 2463 2834 -585 5 1488 26 0 0 0 chr13 118368827 118368853 -1915459 + AT_rich Low_complexity Low_complexity 1 26 0 5 1488 2224 267 40 20 chr13 118370476 118371294 -1913018 + L1_Rod LINE L1 2078 2912 -2935 5 1488 570 236 115 0 chr13 118371328 118371536 -1912776 - L1_Rod LINE L1 -6349 823 592 5 1488 353 348 53 45 chr13 118371843 118372198 -1912114 - L1MDa LINE L1 -6255 378 21 5 1488 28 0 0 0 chr13 118372245 118372273 -1912039 + AT_rich Low_complexity Low_complexity 1 28 0 5 1488 232 333 52 10 chr13 118373499 118373596 -1910716 + L2 LINE L2 207 307 -3112 5 1488 419 229 0 44 chr13 118374298 118374481 -1909831 + (TATG)n Simple_repeat Simple_repeat 4 178 0 5 1488 512 254 0 6 chr13 118374458 118374636 -1909676 + (TA)n Simple_repeat Simple_repeat 2 178 0 5 1488 278 220 33 99 chr13 118376158 118376279 -1908033 + PB1D9 SINE Alu 2 114 -6 5 1488 198 0 0 0 chr13 118376750 118376772 -1907540 + (TCC)n Simple_repeat Simple_repeat 3 24 0 5 1488 5026 42 2 5 chr13 118376802 118377416 -1906896 - L1_Mus1 LINE L1 -2 6565 5954 5 1488 523 139 10 10 chr13 118377438 118377540 -1906772 + CT-rich Low_complexity Low_complexity 2 103 0 5 1488 681 127 104 14 chr13 118377547 118377691 -1906621 - Lx3B LINE L1 -5 6968 6812 5 1488 584 192 26 0 chr13 118377691 118377842 -1906470 - Lx9 LINE L1 -7 7637 7483 5 1488 271 0 0 49 chr13 118378137 118378178 -1906134 + (TTA)n Simple_repeat Simple_repeat 2 40 0 5 1488 351 0 0 0 chr13 118380057 118380096 -1904216 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1488 558 0 0 0 chr13 118380096 118380157 -1904155 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 5 1488 408 422 39 18 chr13 118380195 118380579 -1903733 - BLACKJACK DNA AcHobo -2371 573 182 5 1488 212 189 0 0 chr13 118382060 118382097 -1902215 + T-rich Low_complexity Low_complexity 1 37 0 5 1488 24 53 0 0 chr13 118382204 118382242 -1902070 + AT_rich Low_complexity Low_complexity 1 38 0 5 1488 189 0 0 0 chr13 118383020 118383041 -1901271 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 5 1488 189 171 0 0 chr13 118384378 118384413 -1899899 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 5 1488 345 91 91 0 chr13 118385709 118385775 -1898537 + ORR1A4 LTR MaLR 2 73 -256 5 1488 942 291 85 29 chr13 118385776 118386348 -1897964 + Lx9 LINE L1 6929 7473 -171 5 1488 36 62 0 0 chr13 118386371 118386435 -1897877 + AT_rich Low_complexity Low_complexity 1 64 0 5 1488 481 238 135 0 chr13 118386524 118386650 -1897662 - B1_Mur1 SINE Alu -1 148 6 5 1488 329 346 78 55 chr13 118386713 118387200 -1897112 + L1MC LINE L1 5332 5829 -2053 5 1488 22 0 0 0 chr13 118387310 118387332 -1896980 + AT_rich Low_complexity Low_complexity 1 22 0 5 1488 699 218 0 0 chr13 118387528 118387670 -1896642 - B1_Mur3 SINE Alu -3 146 5 5 1488 279 0 0 0 chr13 118389321 118389352 -1894960 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 5 1488 22 70 0 0 chr13 118389387 118389430 -1894882 + AT_rich Low_complexity Low_complexity 1 43 0 5 1488 279 0 0 0 chr13 118390922 118390953 -1893359 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 5 1488 227 244 0 13 chr13 118390960 118391039 -1893273 + CT-rich Low_complexity Low_complexity 4 81 0 5 1488 186 43 0 0 chr13 118391398 118391421 -1892891 + (CCG)n Simple_repeat Simple_repeat 3 25 0 5 1488 26 0 0 0 chr13 118391625 118391651 -1892661 + GC_rich Low_complexity Low_complexity 1 26 0 5 1488 222 234 0 0 chr13 118392921 118392968 -1891344 + (CAA)n Simple_repeat Simple_repeat 2 48 0 5 1488 23 33 0 0 chr13 118393561 118393591 -1890721 + AT_rich Low_complexity Low_complexity 1 30 0 6 1488 802 182 171 5 chr13 118394771 118394964 -1889348 + URR1B DNA MER1_type 1 225 0 6 1488 255 103 0 0 chr13 118395352 118395391 -1888921 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 6 1488 825 65 0 55 chr13 118395397 118395561 -1888751 + (TCTCC)n Simple_repeat Simple_repeat 2 156 0 6 1488 257 274 0 110 chr13 118395564 118395646 -1888666 - B4A SINE B4 0 292 220 6 1488 587 26 0 13 chr13 118395922 118396000 -1888312 + (TG)n Simple_repeat Simple_repeat 2 78 0 6 1488 1139 88 0 0 chr13 118396787 118396934 -1887378 - B1_Mus1 SINE Alu 0 148 2 6 1488 24 0 0 0 chr13 118397902 118397926 -1886386 + AT_rich Low_complexity Low_complexity 1 24 0 6 1488 375 121 0 0 chr13 118398185 118398243 -1886069 + (TG)n Simple_repeat Simple_repeat 1 58 0 6 1488 669 86 0 0 chr13 118399024 118399117 -1885195 + (TC)n Simple_repeat Simple_repeat 2 94 0 6 1488 679 289 72 50 chr13 118399224 118399769 -1884543 - L1MB8 LINE L1 -2 6176 5620 6 1488 207 333 24 12 chr13 118399994 118400079 -1884233 - MIR SINE MIR -93 115 30 6 1488 190 65 32 0 chr13 118400054 118400085 -1884227 - L3 LINE CR1 -810 3679 3648 6 1488 261 0 0 0 chr13 118400753 118400782 -1883530 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6 1488 913 252 5 0 chr13 118400804 118401002 -1883310 + B3 SINE B2 1 199 -17 6 1488 221 203 0 63 chr13 118402046 118402109 -1882203 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 6 1488 568 288 52 28 chr13 118402250 118402461 -1881851 - B3 SINE B2 0 216 1 6 1488 411 312 70 0 chr13 118402997 118403125 -1881187 + ID_B1 SINE B4 85 221 -3 6 1488 644 327 29 29 chr13 118403944 118404420 -1879892 + Lx7 LINE L1 5621 6100 -1544 6 1488 1856 43 0 17 chr13 118404440 118404674 -1879638 + L1_Mus1 LINE L1 6338 6567 0 6 1488 2037 162 202 61 chr13 118404925 118405530 -1878782 - RMER6C LTR ERVK 0 690 1 6 1488 1119 82 7 0 chr13 118405575 118405721 -1878591 + B1_Mus2 SINE Alu 1 147 0 6 1488 47 19 0 0 chr13 118405819 118405873 -1878439 + AT_rich Low_complexity Low_complexity 1 54 0 6 1488 600 328 140 3 chr13 118406561 118406861 -1877451 - MLT1A0 LTR MaLR 0 365 25 6 1488 25 0 0 0 chr13 118407207 118407232 -1877080 + AT_rich Low_complexity Low_complexity 1 25 0 6 1488 3512 62 0 47 chr13 118407744 118408239 -1876073 + L1_Mus2 LINE L1 6095 6566 0 6 1488 985 140 162 20 chr13 118409459 118409656 -1874656 - URR1B DNA MER1_type 0 225 1 6 1488 180 0 0 0 chr13 118409883 118409903 -1874409 + (CAAAAA)n Simple_repeat Simple_repeat 6 25 0 6 1488 188 351 145 0 chr13 118410898 118411029 -1873283 - MIR SINE MIR -86 176 27 6 1488 39471 28 2 6 chr13 118411091 118417261 -1867051 - L1Md_T LINE L1 -1 6581 445 6 1488 8135 117 24 8 chr13 118417390 118418628 -1865684 - Lx2 LINE L1 -6 6991 5734 6 1488 581 259 169 19 chr13 118418811 118419195 -1865117 - L1MA4A LINE L1 -346 5957 5500 6 1488 481 180 57 8 chr13 118419334 118419457 -1864855 - L1MA4A LINE L1 -867 5276 5148 6 1488 497 248 180 29 chr13 118420675 118420920 -1863392 + L1MC3 LINE L1 6898 7179 -606 6 1488 587 262 113 11 chr13 118420965 118421231 -1863081 + L1MC3 LINE L1 7434 7726 -59 6 1488 265 355 0 0 chr13 118421250 118421326 -1862986 - ID4 SINE ID -3 80 5 6 1488 477 163 0 0 chr13 118422313 118422405 -1861907 + CT-rich Low_complexity Low_complexity 2 93 0 6 1488 214 229 16 16 chr13 118422741 118422803 -1861509 + (TATG)n Simple_repeat Simple_repeat 3 64 0 6 1488 658 332 59 30 chr13 118422805 118423075 -1861237 - B4A SINE B4 -12 280 3 6 1488 228 365 19 19 chr13 118423506 118423612 -1860700 - Lx8 LINE L1 -238 7235 7130 6 1488 456 259 16 137 chr13 118424897 118425080 -1859232 + MTE2b LTR MaLR 18 178 -201 6 1488 429 97 0 0 chr13 118425330 118425402 -1858910 + (TC)n Simple_repeat Simple_repeat 1 72 0 6 1488 2670 124 7 34 chr13 118426666 118427108 -1857204 + RLTR23 LTR ERV1 1 430 0 6 1488 830 272 31 0 chr13 118427231 118427422 -1856890 + B3 SINE B2 1 197 -19 6 1488 208 88 0 56 chr13 118428760 118428796 -1855516 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 6 1488 468 0 0 0 chr13 118429795 118429847 -1854465 + (TA)n Simple_repeat Simple_repeat 1 52 0 6 1488 602 274 55 44 chr13 118430335 118430606 -1853706 - L1_Rod LINE L1 -918 4929 4656 6 1488 851 137 11 11 chr13 118430608 118430785 -1853527 + CT-rich Low_complexity Low_complexity 2 178 0 6 1488 663 316 83 4 chr13 118430810 118431086 -1853226 + Lx8 LINE L1 6758 7055 -418 6 1488 1175 199 110 53 chr13 118431198 118431553 -1852759 - ORR1C1 LTR MaLR -1 377 3 6 1488 1074 253 106 21 chr13 118431905 118432244 -1852068 - ORR1D2 LTR MaLR 0 370 3 6 1488 396 0 0 0 chr13 118432330 118432374 -1851938 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 6 1488 1091 52 0 0 chr13 118432375 118432509 -1851803 - B1_Mus2 SINE Alu -11 136 3 6 1488 731 307 71 9 chr13 118432581 118432906 -1851406 - Lx8 LINE L1 -251 7222 6878 6 1488 253 235 0 0 chr13 118432996 118433047 -1851265 + Lx8 LINE L1 7112 7162 -311 6 1488 494 300 8 0 chr13 118433147 118433277 -1851035 - Lx8 LINE L1 -766 6707 6577 6 1488 180 0 0 0 chr13 118434040 118434060 -1850252 + (TCTA)n Simple_repeat Simple_repeat 3 22 0 6 1488 2896 84 15 2 chr13 118434820 118435213 -1849099 + MTB LTR MaLR 3 400 0 6 1488 449 345 69 5 chr13 118435370 118435604 -1848708 - Lx8 LINE L1 -212 7261 7004 6 1488 197 119 0 23 chr13 118435650 118435693 -1848619 + (TAA)n Simple_repeat Simple_repeat 1 42 0 6 1488 1805 108 25 0 chr13 118436488 118436765 -1847547 - Lx2 LINE L1 0 6997 6714 6 1488 290 360 6 128 chr13 118438118 118438274 -1846038 + ID_B1 SINE B4 81 217 -7 6 1488 323 252 115 23 chr13 118440707 118440837 -1843475 + L1MC1 LINE L1 6174 6315 -18 6 1488 401 271 37 0 chr13 118442274 118442381 -1841931 - MTD LTR MaLR -275 144 34 6 1488 1556 271 70 90 chr13 118442410 118443426 -1840886 - MTD-int LTR MaLR 0 1258 7 6 1488 1321 249 70 9 chr13 118443442 118443786 -1840526 - MTD LTR MaLR -14 405 41 6 1488 1107 256 92 3 chr13 118444154 118444436 -1839876 - MTE2b LTR MaLR -13 366 60 6 1488 508 165 43 17 chr13 118444659 118444776 -1839536 + Lx5 LINE L1 6931 7050 0 6 1488 26 0 0 0 chr13 118445077 118445103 -1839209 + AT_rich Low_complexity Low_complexity 1 26 0 6 1488 225 159 0 0 chr13 118446624 118446668 -1837644 + T-rich Low_complexity Low_complexity 1 44 0 6 1488 279 307 92 40 chr13 118447224 118447353 -1836959 - MIR SINE MIR -65 197 60 6 1488 324 48 0 0 chr13 118447353 118447395 -1836917 + (TGG)n Simple_repeat Simple_repeat 2 43 0 6 1488 279 307 92 40 chr13 118447395 118447438 -1836874 - MIR SINE MIR -203 59 16 6 1488 339 78 0 0 chr13 118448207 118448258 -1836054 + (TCTCTG)n Simple_repeat Simple_repeat 4 54 0 6 1488 342 0 0 0 chr13 118448261 118448299 -1836013 + (CA)n Simple_repeat Simple_repeat 2 39 0 6 1488 316 256 55 55 chr13 118449475 118449566 -1834746 + PB1D10 SINE Alu 9 99 -18 6 1488 405 203 0 0 chr13 118452086 118452155 -1832157 + B1_Mus1 SINE Alu 3 71 -77 6 1488 410 350 9 13 chr13 118452158 118452388 -1831924 + Lx9 LINE L1 6877 7236 -408 6 1488 872 137 0 61 chr13 118452739 118452902 -1831410 - Lx6 LINE L1 -631 6829 6677 6 1488 431 361 99 11 chr13 118453135 118453317 -1830995 - B4 SINE B4 -86 206 9 6 1488 934 157 11 0 chr13 118453338 118453516 -1830796 + CT-rich Low_complexity Low_complexity 1 180 0 6 1488 224 265 0 0 chr13 118453516 118453530 -1830782 + polypyrimidine Low_complexity Low_complexity 37 50 0 6 1488 1224 101 0 0 chr13 118453530 118453708 -1830604 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 6 1488 230 245 0 0 chr13 118453708 118453757 -1830555 + CT-rich Low_complexity Low_complexity 2 50 0 6 1488 347 290 86 89 chr13 118454486 118454834 -1829478 - L1MEc LINE L1 -3374 2945 2599 6 1488 342 356 81 36 chr13 118454980 118455423 -1828889 - L1MEc LINE L1 -4149 2251 1789 6 1488 419 227 0 7 chr13 118455424 118455579 -1828733 + CT-rich Low_complexity Low_complexity 1 154 0 6 1488 1007 175 0 21 chr13 118456671 118456858 -1827454 - Lx9 LINE L1 -724 6920 6738 6 1488 410 198 85 17 chr13 118456877 118456995 -1827317 + Lx9 LINE L1 7395 7520 -124 6 1488 221 258 0 11 chr13 118456999 118457093 -1827219 + (TA)n Simple_repeat Simple_repeat 2 94 0 6 1488 285 206 41 0 chr13 118457095 118457168 -1827144 + Lx9 LINE L1 7567 7642 -2 6 1488 439 217 41 8 chr13 118459103 118459224 -1825088 - Lx9 LINE L1 -3 7641 7517 6 1488 435 63 0 0 chr13 118459226 118459289 -1825023 + (CA)n Simple_repeat Simple_repeat 2 64 0 6 1488 22 0 0 0 chr13 118459416 118459438 -1824874 + AT_rich Low_complexity Low_complexity 1 22 0 6 1488 21 0 0 0 chr13 118459891 118459912 -1824400 + AT_rich Low_complexity Low_complexity 1 21 0 6 1488 194 372 92 52 chr13 118459988 118460161 -1824151 + L2 LINE L2 2887 3066 -353 6 1488 372 71 0 0 chr13 118460283 118460339 -1823973 + (TCTA)n Simple_repeat Simple_repeat 1 56 0 6 1488 428 128 23 0 chr13 118460339 118460425 -1823887 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 6 1488 348 64 0 0 chr13 118461001 118461048 -1823264 + (TG)n Simple_repeat Simple_repeat 2 48 0 6 1488 23 33 0 0 chr13 118461057 118461087 -1823225 + AT_rich Low_complexity Low_complexity 1 30 0 6 1488 3007 82 5 12 chr13 118461205 118461611 -1822701 + MTB_Mm LTR MaLR 1 403 -4 6 1488 180 111 0 0 chr13 118461664 118461691 -1822621 + (T)n Simple_repeat Simple_repeat 1 27 0 6 1488 207 382 65 57 chr13 118462203 118462380 -1821932 + L2a LINE L2 282 446 -2973 6 1488 198 71 0 0 chr13 118462380 118462408 -1821904 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6 1488 207 382 65 57 chr13 118462408 118462616 -1821696 + L2a LINE L2 447 670 -2749 6 1488 268 291 18 35 chr13 118462693 118462807 -1821505 + CT-rich Low_complexity Low_complexity 3 114 0 6 1488 226 327 0 0 chr13 118462937 118462992 -1821320 - ID SINE ID -169 55 1 6 1488 206 407 82 4 chr13 118463141 118463373 -1820939 + L2a LINE L2 2918 3167 -259 6 1488 279 0 0 0 chr13 118463668 118463699 -1820613 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 6 1488 517 307 139 32 chr13 118463842 118464094 -1820218 + B4A SINE B4 12 290 -2 7 1488 991 297 127 16 chr13 118464456 118464904 -1819408 + Lx8 LINE L1 6974 7471 -2 7 1488 195 42 0 0 chr13 118465495 118465519 -1818793 + (TC)n Simple_repeat Simple_repeat 1 24 0 7 1488 361 228 0 12 chr13 118465937 118466017 -1818295 - ID4 SINE ID 0 83 5 7 1488 330 272 33 66 chr13 118466200 118466322 -1817990 + B4A SINE B4 7 124 -168 7 1488 254 312 62 0 chr13 118466598 118466694 -1817618 + Lx9 LINE L1 7196 7297 -347 7 1488 535 332 10 5 chr13 118466705 118466899 -1817413 - B3A SINE B2 0 198 4 7 1488 1249 67 6 16 chr13 118467234 118467416 -1816896 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 7 1488 280 284 47 117 chr13 118467801 118467967 -1816345 + MIR SINE MIR 51 194 -68 7 1488 2627 107 27 2 chr13 118468356 118468759 -1815553 + Lx LINE L1 6227 6639 -15 7 1488 312 27 0 0 chr13 118469009 118469046 -1815266 + (TCCC)n Simple_repeat Simple_repeat 2 38 0 7 1488 293 283 32 11 chr13 118469290 118469383 -1814929 + Lx8 LINE L1 7189 7283 -190 7 1488 1912 133 9 60 chr13 118469506 118469841 -1814471 - ORR1A3 LTR MaLR -8 318 1 7 1488 461 321 30 0 chr13 118469999 118470130 -1814182 - ID_B1 SINE B4 -8 216 82 7 1488 207 262 0 0 chr13 118470953 118471014 -1813298 + CT-rich Low_complexity Low_complexity 2 62 0 7 1488 497 316 105 20 chr13 118471072 118471272 -1813040 - MTD LTR MaLR -64 355 139 7 1488 1178 279 0 10 chr13 118471276 118471566 -1812746 + Lx5 LINE L1 6571 6857 -193 7 1488 954 106 13 0 chr13 118472163 118472307 -1812005 + L1Md_F2 LINE L1 5462 5615 -541 7 1488 7986 49 7 1 chr13 118472307 118473295 -1811017 + L1Md_F2 LINE L1 5587 6580 -2 7 1488 387 60 0 0 chr13 118473461 118473511 -1810801 + (GGA)n Simple_repeat Simple_repeat 3 52 0 7 1488 1427 241 127 3 chr13 118474376 118474730 -1809582 - MTD LTR MaLR -2 417 20 7 1488 198 71 0 0 chr13 118475045 118475073 -1809239 + (TTAAA)n Simple_repeat Simple_repeat 4 31 0 7 1488 291 298 85 116 chr13 118476365 118476494 -1807818 + PB1 SINE Alu 1 125 -2 7 1488 29 60 0 0 chr13 118477549 118477599 -1806713 + AT_rich Low_complexity Low_complexity 1 50 0 7 1488 714 213 88 116 chr13 118477638 118477967 -1806345 - Lx9 LINE L1 -8 7636 7317 7 1488 207 0 0 0 chr13 118479385 118479408 -1804904 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 7 1488 1160 42 0 7 chr13 118479408 118479544 -1804768 - B1_Mus1 SINE Alu -8 140 5 7 1488 1124 340 37 43 chr13 118479700 118479711 -1804601 - Lx9 LINE L1 -215 7429 7422 7 1488 432 0 0 0 chr13 118479711 118479759 -1804553 + (CA)n Simple_repeat Simple_repeat 2 49 0 7 1488 1124 340 37 43 chr13 118479759 118480470 -1803842 - Lx9 LINE L1 -223 7421 6711 7 1488 322 283 0 42 chr13 118480474 118480570 -1803742 + Lx9 LINE L1 6600 6691 -953 7 1488 413 289 162 27 chr13 118480888 118481073 -1803239 - B3 SINE B2 -5 211 2 7 1488 470 95 27 0 chr13 118481092 118481166 -1803146 - Lx6 LINE L1 -8 7452 7377 7 1488 1045 88 0 0 chr13 118481506 118481643 -1802669 + B1_Mus1 SINE Alu 1 137 -11 7 1488 243 0 0 0 chr13 118481645 118481672 -1802640 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 7 1488 524 254 8 24 chr13 118482507 118482632 -1801680 + B3 SINE B2 11 133 -83 7 1488 1368 245 168 12 chr13 118482772 118483177 -1801135 - Lx3C LINE L1 -5 6971 6504 7 1488 632 0 0 129 chr13 118483177 118483301 -1801011 + (TC)n Simple_repeat Simple_repeat 2 109 0 7 1488 369 0 0 0 chr13 118483302 118483343 -1800969 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1488 471 370 21 46 chr13 118483393 118483631 -1800681 - B4A SINE B4 -60 232 1 7 1488 489 176 41 28 chr13 118484161 118484378 -1799934 + (TCTA)n Simple_repeat Simple_repeat 1 219 0 7 1488 1022 237 61 6 chr13 118484417 118484762 -1799550 - MTD LTR MaLR -9 410 1 7 1488 983 97 20 14 chr13 118484937 118485071 -1799241 + B1_Mus1 SINE Alu 2 135 -13 7 1488 388 33 0 62 chr13 118485071 118485135 -1799177 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 7 1488 983 97 20 14 chr13 118485135 118485146 -1799166 + B1_Mus1 SINE Alu 136 148 0 7 1488 360 0 0 0 chr13 118485409 118485449 -1798863 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 7 1488 24 0 0 0 chr13 118486561 118486585 -1797727 + AT_rich Low_complexity Low_complexity 1 24 0 7 1488 225 299 77 13 chr13 118486766 118486844 -1797468 + ID4_ SINE ID 1 83 0 7 1488 631 280 154 57 chr13 118487762 118488080 -1796232 - ORR1E LTR MaLR -10 349 1 7 1488 251 274 42 0 chr13 118488230 118488325 -1795987 + Tigger7 DNA MER2_type 2285 2383 -108 7 1488 476 314 41 128 chr13 118488368 118488587 -1795725 - MER44D DNA MER2_type -505 200 1 7 23 21 0 0 0 chr13 118489070 118489091 -1795221 + AT_rich Low_complexity Low_complexity 1 21 0 7 1489 627 263 0 0 chr13 118489323 118489460 -1794852 + B1_Mur3 SINE Alu 2 138 -11 7 1489 482 0 17 0 chr13 118489460 118489518 -1794794 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 7 1489 377 288 23 23 chr13 118489858 118489896 -1794416 - B3 SINE B2 -13 203 165 7 1489 1473 39 0 0 chr13 118489896 118490076 -1794236 + (TG)n Simple_repeat Simple_repeat 1 180 0 7 1489 377 235 16 112 chr13 118490076 118490180 -1794132 - B3 SINE B2 -52 164 61 7 1489 297 0 0 0 chr13 118490457 118490490 -1793822 + (TG)n Simple_repeat Simple_repeat 2 34 0 7 1489 436 346 40 69 chr13 118490691 118490967 -1793345 - MLT1B LTR MaLR -10 380 113 7 1489 216 300 25 0 chr13 118490971 118491051 -1793261 + (TG)n Simple_repeat Simple_repeat 1 82 0 7 1489 526 337 80 10 chr13 118491090 118491291 -1793021 - B4 SINE B4 -77 215 1 7 1489 328 287 41 8 chr13 118491291 118491412 -1792900 - MLT1B LTR MaLR -262 128 4 7 1489 851 99 15 0 chr13 118491425 118491556 -1792756 + (TTTC)n Simple_repeat Simple_repeat 4 136 0 7 1489 1069 311 25 16 chr13 118492557 118492920 -1791392 - Lx6 LINE L1 -26 7434 7069 7 1489 232 27 54 0 chr13 118493592 118493629 -1790683 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 7 1489 395 347 8 31 chr13 118494235 118494363 -1789949 - B1F SINE Alu -21 128 4 7 1489 376 303 68 39 chr13 118494480 118494583 -1789729 + ID_B1 SINE B4 15 120 -104 7 1489 525 32 0 0 chr13 118496487 118496550 -1787762 + (TG)n Simple_repeat Simple_repeat 1 63 0 7 1489 461 62 0 15 chr13 118497038 118497104 -1787208 + (CATA)n Simple_repeat Simple_repeat 4 68 0 7 1489 353 281 126 91 chr13 118497537 118497791 -1786521 + L1MC LINE L1 4716 4978 -1168 7 1489 189 0 0 0 chr13 118497801 118497822 -1786490 + (T)n Simple_repeat Simple_repeat 1 21 0 7 1489 1395 88 5 0 chr13 118498907 118499099 -1785213 + B2_Mm1t SINE B2 1 193 0 7 1489 480 371 24 0 chr13 118499534 118499744 -1784568 + MIR SINE MIR 30 244 -18 7 1489 258 32 0 0 chr13 118500295 118500326 -1783986 + (A)n Simple_repeat Simple_repeat 1 31 0 1 1489 1174 0 0 0 chr13 118500669 118500806 -1783506 + L1_Mm LINE L1 5226 5362 -521 2 1489 5364 107 23 17 chr13 118501706 118502530 -1781782 - Lx LINE L1 0 6654 5826 3 1489 23 33 0 0 chr13 118502542 118502572 -1781740 + AT_rich Low_complexity Low_complexity 1 30 0 4 1489 22 70 0 0 chr13 118502650 118502693 -1781619 + AT_rich Low_complexity Low_complexity 1 43 0 5 1489 22 35 0 0 chr13 118503417 118503446 -1780866 + AT_rich Low_complexity Low_complexity 1 29 0 6 1489 241 341 24 0 chr13 118503877 118503962 -1780350 + BC1_Mm scRNA scRNA 7 93 -59 7 1489 1045 108 128 11 chr13 118504619 118504806 -1779506 + Lx3B LINE L1 6765 6973 0 8 1489 300 53 0 0 chr13 118504809 118504847 -1779465 + (TAA)n Simple_repeat Simple_repeat 2 39 0 9 1489 195 42 0 0 chr13 118504937 118504961 -1779351 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1489 211 143 0 23 chr13 118506062 118506105 -1778207 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 1 1489 388 295 122 19 chr13 118506537 118506848 -1777464 - L1MA6 LINE L1 -7 6293 5951 1 1489 239 350 10 0 chr13 118506919 118507022 -1777290 - Lx9 LINE L1 -208 7436 7333 1 1489 4756 82 29 5 chr13 118508236 118508900 -1775412 - Lx3_Mus LINE L1 -743 6266 5587 1 1489 4981 96 7 14 chr13 118508923 118509650 -1774662 + Lx3_Mus LINE L1 6288 7009 0 1 1489 495 0 0 0 chr13 118509977 118510032 -1774280 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1 1489 219 69 0 0 chr13 118510182 118510211 -1774101 + (TTCC)n Simple_repeat Simple_repeat 1 29 0 1 1489 1092 101 6 11 chr13 118510211 118510391 -1773921 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1 1489 734 286 28 28 chr13 118511586 118511802 -1772510 - B3 SINE B2 0 216 1 1 1489 451 140 21 0 chr13 118512767 118512860 -1771452 + L1Md_F2 LINE L1 6487 6581 -1 2 1489 285 29 0 0 chr13 118513671 118513705 -1770607 + (T)n Simple_repeat Simple_repeat 1 34 0 2 1489 215 186 0 23 chr13 118514284 118514328 -1769984 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2 1489 21 36 0 0 chr13 118514776 118514804 -1769508 + AT_rich Low_complexity Low_complexity 1 28 0 2 1489 21 71 0 0 chr13 118514925 118514967 -1769345 + AT_rich Low_complexity Low_complexity 1 42 0 2 1489 629 342 116 7 chr13 118515190 118515597 -1768715 - Lx8 LINE L1 -115 7358 6908 2 1489 351 0 0 0 chr13 118515598 118515637 -1768675 + (TG)n Simple_repeat Simple_repeat 2 40 0 2 1489 748 354 35 9 chr13 118515637 118515985 -1768327 - Lx8 LINE L1 -599 6874 6518 2 1489 858 45 0 0 chr13 118515986 118516097 -1768215 + (TA)n Simple_repeat Simple_repeat 2 112 0 2 1489 1915 124 42 60 chr13 118516403 118516738 -1767574 - ORR1A4 LTR MaLR 0 329 1 2 1489 235 391 78 63 chr13 118517760 118517965 -1766347 - B4A SINE B4 0 292 85 2 1489 229 174 55 55 chr13 118517966 118518039 -1766273 + CT-rich Low_complexity Low_complexity 5 77 0 3 1489 351 167 0 0 chr13 118518040 118518106 -1766206 + C-rich Low_complexity Low_complexity 5 70 0 3 1489 589 225 22 0 chr13 118518116 118518254 -1766058 - B1_Mur4 SINE Alu -8 142 2 3 1489 209 200 22 0 chr13 118519203 118519248 -1765064 + (TCTG)n Simple_repeat Simple_repeat 4 49 0 3 1489 630 326 93 19 chr13 118519392 118519596 -1764716 + Lx8 LINE L1 7126 7346 -127 3 1489 285 29 0 0 chr13 118519596 118519630 -1764682 + (CAA)n Simple_repeat Simple_repeat 2 35 0 3 1489 630 326 93 19 chr13 118519630 118519747 -1764565 + Lx8 LINE L1 7347 7471 -2 3 1489 212 120 39 39 chr13 118519753 118519805 -1764507 + A-rich Low_complexity Low_complexity 1 52 0 3 1489 21 57 0 0 chr13 118520660 118520695 -1763617 + AT_rich Low_complexity Low_complexity 1 35 0 3 1489 21 36 0 0 chr13 118520736 118520764 -1763548 + AT_rich Low_complexity Low_complexity 1 28 0 3 1489 242 143 0 16 chr13 118520879 118520943 -1763369 + A-rich Low_complexity Low_complexity 2 64 0 3 1489 441 341 76 16 chr13 118520959 118521144 -1763168 + B3A SINE B2 2 197 -1 4 1489 375 83 0 0 chr13 118521278 118521338 -1762974 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 4 1489 224 333 20 0 chr13 118521397 118521448 -1762864 + B4A SINE B4 87 138 -154 4 1489 356 0 0 22 chr13 118521490 118521535 -1762777 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 4 1489 847 54 15 58 chr13 118522300 118522437 -1761875 + Lx2 LINE L1 6866 6996 -1 4 1489 381 335 82 66 chr13 118522603 118522859 -1761453 + MTEa LTR MaLR 55 314 -65 4 1489 702 379 45 20 chr13 118522929 118523330 -1760982 + Lx8 LINE L1 6822 7232 -241 4 1489 4527 104 24 45 chr13 118523439 118524146 -1760166 + Lx3B LINE L1 6278 6969 -4 4 1489 195 0 86 0 chr13 118524152 118524187 -1760125 + (TAA)n Simple_repeat Simple_repeat 2 39 0 4 1489 413 306 58 77 chr13 118524496 118524532 -1759780 + B4 SINE B4 70 220 -70 4 1489 780 144 8 0 chr13 118524532 118524650 -1759662 + B1_Mus1 SINE Alu 24 142 -6 5 1489 24 32 0 0 chr13 118524760 118524791 -1759521 + AT_rich Low_complexity Low_complexity 1 31 0 5 1489 477 0 0 0 chr13 118525097 118525150 -1759162 + (TG)n Simple_repeat Simple_repeat 1 53 0 5 1489 186 394 21 21 chr13 118525935 118526075 -1758237 + MIR SINE MIR 46 185 -77 5 1489 763 245 29 10 chr13 118527053 118527259 -1757053 - B3 SINE B2 -6 210 1 5 1489 282 321 81 11 chr13 118528012 118528198 -1756114 + L1MEf LINE L1 922 1120 -5080 5 1489 360 0 0 0 chr13 118529209 118529249 -1755063 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 5 1489 231 36 0 0 chr13 118529997 118530025 -1754287 + (CA)n Simple_repeat Simple_repeat 1 28 0 5 1489 21 36 0 0 chr13 118530687 118530715 -1753597 + AT_rich Low_complexity Low_complexity 1 28 0 5 1489 569 226 61 0 chr13 118530737 118530852 -1753460 - B3 SINE B2 -93 123 2 5 1489 263 306 28 84 chr13 118531786 118531893 -1752419 - L4 LINE RTE -563 1466 1366 6 1489 835 142 6 6 chr13 118532076 118532239 -1752073 + CT-rich Low_complexity Low_complexity 2 164 0 6 1489 23 0 0 0 chr13 118532439 118532462 -1751850 + AT_rich Low_complexity Low_complexity 1 23 0 6 1489 1339 298 30 36 chr13 118532504 118533030 -1751282 - Lx9 LINE L1 -174 7470 6948 6 1489 194 0 0 37 chr13 118533254 118533281 -1751031 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 6 1489 438 36 0 0 chr13 118533558 118533614 -1750698 + (TC)n Simple_repeat Simple_repeat 1 56 0 6 1489 342 0 0 0 chr13 118533614 118533651 -1750661 + (CA)n Simple_repeat Simple_repeat 1 38 0 6 1489 1218 41 0 0 chr13 118533878 118534025 -1750287 + B1_Mm SINE Alu 1 147 0 6 1489 217 0 0 57 chr13 118534423 118534458 -1749854 + (TTA)n Simple_repeat Simple_repeat 3 35 0 6 1489 435 38 0 0 chr13 118535038 118535091 -1749221 + (TC)n Simple_repeat Simple_repeat 2 54 0 6 1489 228 135 0 0 chr13 118535091 118535128 -1749184 + (TG)n Simple_repeat Simple_repeat 1 37 0 7 1489 375 286 51 56 chr13 118535474 118535652 -1748660 - Lx8 LINE L1 -1079 6394 6218 7 1489 1091 109 0 0 chr13 118536149 118536296 -1748016 + B1_Mus2 SINE Alu 1 147 0 7 1489 382 231 69 34 chr13 118536648 118536881 -1747431 + RMER17D2 LTR ERVK 235 475 -334 7 1489 198 71 0 0 chr13 118536888 118536916 -1747396 + (GA)n Simple_repeat Simple_repeat 1 28 0 7 1489 654 13 0 0 chr13 118537598 118537673 -1746639 + (TG)n Simple_repeat Simple_repeat 2 76 0 7 1489 385 358 43 86 chr13 118539277 118539604 -1744708 + MLT1B LTR MaLR 1 313 -77 7 1489 339 377 115 63 chr13 118539671 118540053 -1744259 + LTR33 LTR ERVL 114 515 0 7 1489 535 249 103 31 chr13 118540107 118540302 -1744010 - B3 SINE B2 -5 211 3 7 1489 454 162 9 0 chr13 118540781 118540886 -1743426 + Lx LINE L1 6548 6653 -1 7 1489 584 81 11 0 chr13 118541618 118541705 -1742607 + (TC)n Simple_repeat Simple_repeat 1 88 0 8 1489 573 15 0 0 chr13 118541705 118541771 -1742541 + (CA)n Simple_repeat Simple_repeat 1 66 0 8 1489 577 265 0 36 chr13 118541801 118541938 -1742374 - B1_Mm SINE Alu -14 133 2 8 1489 202 200 0 0 chr13 118542058 118542103 -1742209 + (TG)n Simple_repeat Simple_repeat 2 46 0 8 1489 22 0 0 0 chr13 118542601 118542623 -1741689 + AT_rich Low_complexity Low_complexity 1 22 0 8 1489 455 267 74 14 chr13 118542899 118542923 -1741389 - B4A SINE B4 -48 244 88 8 1489 937 97 0 0 chr13 118542923 118543047 -1741265 - B1_Mm SINE Alu -21 126 3 8 1489 410 250 55 90 chr13 118543047 118543082 -1741230 - MT2B2 LTR ERVL -430 154 125 8 1489 1182 299 36 31 chr13 118543096 118543511 -1740801 - Lx8 LINE L1 -40 7433 7017 8 1489 999 108 0 13 chr13 118543558 118543717 -1740595 + RMER10B LTR ERVL 4 160 -238 8 1489 615 261 43 90 chr13 118543721 118543999 -1740313 - RMER17C-int LTR ERVK -365 2873 2609 9 1489 563 244 52 89 chr13 118544841 118544869 -1739443 + B4 SINE B4 62 132 -160 9 1489 1051 103 0 0 chr13 118544869 118545014 -1739298 + B1_Mus1 SINE Alu 4 148 0 9 1489 563 244 52 89 chr13 118545014 118545074 -1739238 + B4 SINE B4 133 292 0 9 1489 264 122 0 0 chr13 118545143 118545184 -1739128 + (CAA)n Simple_repeat Simple_repeat 2 42 0 9 1489 7349 77 4 22 chr13 118545460 118546675 -1737637 - L1_Mus2 LINE L1 -1 6565 5371 9 1489 22 70 0 0 chr13 118546756 118546799 -1737513 + AT_rich Low_complexity Low_complexity 1 43 0 9 1489 760 83 0 0 chr13 118546799 118546908 -1737404 - L1_Mus2 LINE L1 0 6566 6458 9 1489 302 81 0 0 chr13 118546908 118546945 -1737367 + L1_Mus2 LINE L1 6417 6453 -113 9 1489 258 56 0 0 chr13 118546979 118547015 -1737297 + (TTG)n Simple_repeat Simple_repeat 2 37 0 9 1489 7525 62 3 33 chr13 118547417 118548560 -1735752 - L1Md_F2 LINE L1 -10 6572 5450 9 1489 13938 66 3 1 chr13 118548560 118550378 -1733934 + L1Md_F2 LINE L1 3629 5450 -433 9 1489 24 53 0 0 chr13 118550499 118550537 -1733775 + AT_rich Low_complexity Low_complexity 1 38 0 9 1489 1214 225 38 23 chr13 118550750 118551079 -1733233 - ORR1B1 LTR MaLR 0 394 10 1 1489 259 256 70 93 chr13 118551382 118551468 -1732844 + B3A SINE B2 1 84 -114 1 1489 836 159 6 0 chr13 118551541 118551698 -1732614 + (TA)n Simple_repeat Simple_repeat 1 158 0 1 1489 303 28 0 0 chr13 118551698 118551734 -1732578 + (CA)n Simple_repeat Simple_repeat 2 37 0 1 1489 303 212 182 0 chr13 118551739 118551805 -1732507 - ORR1B1 LTR MaLR -213 181 104 1 1489 324 0 0 0 chr13 118551806 118551842 -1732470 + (TG)n Simple_repeat Simple_repeat 2 37 0 1 1489 276 300 45 23 chr13 118551998 118552131 -1732181 - L1MC3 LINE L1 -220 7565 7430 1 1489 319 330 124 10 chr13 118552270 118552463 -1731849 - L1MC3 LINE L1 -660 7125 6911 1 1489 399 234 18 53 chr13 118552679 118552792 -1731520 - MLT1A1 LTR MaLR -1 407 299 1 1489 21 71 0 0 chr13 118553057 118553099 -1731213 + AT_rich Low_complexity Low_complexity 1 42 0 1 1489 3902 111 28 0 chr13 118553369 118553948 -1730364 - Lx3A LINE L1 -58 6923 6329 1 1489 1359 275 131 12 chr13 118555081 118555486 -1728826 + Lx5 LINE L1 6583 7035 -15 1 1489 222 128 0 0 chr13 118555499 118555538 -1728774 + (TTAG)n Simple_repeat Simple_repeat 2 40 0 1 1489 981 235 108 0 chr13 118555657 118555934 -1728378 - RCHARR1 DNA MER1_type -145 829 523 1 1489 647 263 94 44 chr13 118556086 118556384 -1727928 - Lx9 LINE L1 -162 7482 7170 1 1489 30 0 0 0 chr13 118556387 118556417 -1727895 + AT_rich Low_complexity Low_complexity 1 30 0 1 1489 560 218 18 55 chr13 118556509 118556674 -1727638 - Lx9 LINE L1 -482 7162 7004 1 1489 976 273 158 39 chr13 118556674 118557116 -1727196 - RCHARR1 DNA MER1_type -479 495 1 1 1489 1247 289 5 43 chr13 118558842 118559218 -1725094 - Lx5 LINE L1 -18 7032 6671 1 1489 271 309 53 15 chr13 118559309 118559572 -1724740 - L1M3 LINE L1 -960 5183 4911 1 1489 1804 14 18 0 chr13 118559697 118559915 -1724397 - L1Md_F2 LINE L1 -1 6581 6360 1 1489 692 25 0 0 chr13 118559915 118559995 -1724317 + L1Md_F3 LINE L1 6034 6113 -471 1 1489 366 250 36 0 chr13 118560260 118560344 -1723968 - L1M3 LINE L1 -1541 4599 4513 1 1489 555 16 0 0 chr13 118560344 118560408 -1723904 + (TC)n Simple_repeat Simple_repeat 1 64 0 1 1489 2433 135 56 7 chr13 118560908 118561318 -1722994 + Lx3A LINE L1 6552 6981 0 1 1489 465 66 0 0 chr13 118561318 118561379 -1722933 + (GA)n Simple_repeat Simple_repeat 2 62 0 1 1489 438 20 0 0 chr13 118562091 118562142 -1722170 + (CA)n Simple_repeat Simple_repeat 2 52 0 1 1489 390 94 0 0 chr13 118562142 118562206 -1722106 + (GA)n Simple_repeat Simple_repeat 1 64 0 1 1489 330 335 65 15 chr13 118563029 118563229 -1721083 + ID_B1 SINE B4 1 210 -14 1 1489 416 231 34 7 chr13 118564042 118564190 -1720122 + (TA)n Simple_repeat Simple_repeat 2 153 0 1 1489 489 345 28 34 chr13 118564199 118564376 -1719936 + ORR1E LTR MaLR 77 252 -107 1 1489 1787 148 50 29 chr13 118564379 118564719 -1719593 + Lx LINE L1 6294 6640 -14 1 1489 832 299 123 33 chr13 118564773 118565105 -1719207 + MTE2b LTR MaLR 16 377 -2 1 1489 246 240 0 39 chr13 118565105 118565174 -1719138 + ORR1E LTR MaLR 314 379 0 1 1489 878 279 89 15 chr13 118565175 118565360 -1718952 - RCHARR1 DNA MER1_type -442 532 326 1 1489 294 125 0 0 chr13 118565360 118565408 -1718904 + (TA)n Simple_repeat Simple_repeat 2 49 0 1 1489 878 279 89 15 chr13 118565408 118565546 -1718766 - RCHARR1 DNA MER1_type -649 325 185 1 1489 1023 248 107 7 chr13 118565589 118565917 -1718395 - ORR1D1 LTR MaLR 0 359 1 1 1489 439 169 119 99 chr13 118565917 118566068 -1718244 - ORR1D1-int LTR MaLR 0 1370 1217 1 1489 1686 30 5 0 chr13 118566068 118566270 -1718042 - L1Md_T LINE L1 -205 6377 6175 1 1489 1226 33 0 0 chr13 118566270 118566423 -1717889 + L1Md_A LINE L1 6430 6582 0 1 1489 3993 242 58 40 chr13 118566451 118567528 -1716784 - ORR1D1-int LTR MaLR -269 1101 5 1 1489 719 258 107 118 chr13 118567541 118567784 -1716528 - ORR1D1 LTR MaLR -13 361 132 1 1489 647 25 0 12 chr13 118567784 118567866 -1716446 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 1 1489 719 258 107 118 chr13 118567866 118567987 -1716325 - ORR1D1 LTR MaLR -243 131 1 1 1489 250 303 67 11 chr13 118567996 118568086 -1716226 - RCHARR1 DNA MER1_type -879 95 1 1 1489 446 188 23 23 chr13 118568753 118568884 -1715428 + (CATA)n Simple_repeat Simple_repeat 1 131 0 1 1489 652 270 45 10 chr13 118570379 118570577 -1713735 - B3 SINE B2 -7 209 5 1 1489 270 0 0 0 chr13 118571118 118571148 -1713164 + (A)n Simple_repeat Simple_repeat 1 30 0 1 1489 1423 322 118 62 chr13 118571441 118572343 -1711969 - Lx8 LINE L1 -84 7389 6423 1 1489 1186 62 0 0 chr13 118572343 118572489 -1711823 - B1_Mm SINE Alu 0 147 2 1 1489 1423 322 118 62 chr13 118572489 118572864 -1711448 - Lx8 LINE L1 -1051 6422 6040 1 1489 254 264 65 21 chr13 118573167 118573260 -1711052 - Lx8 LINE L1 -655 5192 5096 1 1489 677 267 147 37 chr13 118573314 118573706 -1710606 - L1_Mur3 LINE L1 -818 5062 4626 1 1489 1462 103 5 5 chr13 118573706 118573930 -1710382 - Lx LINE L1 -4 6650 6427 1 1489 22 35 0 0 chr13 118574113 118574142 -1710170 + AT_rich Low_complexity Low_complexity 1 29 0 1 1489 626 147 0 9 chr13 118574565 118574675 -1709637 + RMER12 LTR ERVK 576 684 -638 1 1489 503 62 88 0 chr13 118574693 118574773 -1709539 - L1_Mus1 LINE L1 0 6567 6481 1 1489 498 252 36 82 chr13 118575555 118575775 -1708537 - Lx9 LINE L1 -419 7225 7016 1 1489 21 71 0 0 chr13 118575967 118576009 -1708303 + AT_rich Low_complexity Low_complexity 1 42 0 1 1489 211 140 0 23 chr13 118578575 118578619 -1705693 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1 1489 1481 118 0 47 chr13 118578619 118578877 -1705435 + L1Md_F2 LINE L1 6336 6581 -1 1 1489 21 0 0 0 chr13 118579126 118579147 -1705165 + AT_rich Low_complexity Low_complexity 1 21 0 1 1489 311 375 66 53 chr13 118581024 118581252 -1703060 - MLT1A0 LTR MaLR -127 238 8 1 1489 21 0 0 0 chr13 118581344 118581365 -1702947 + AT_rich Low_complexity Low_complexity 1 21 0 1 1489 22 35 0 0 chr13 118581444 118581473 -1702839 + AT_rich Low_complexity Low_complexity 1 29 0 1 1489 4732 235 56 12 chr13 118583868 118585079 -1699233 + Lx9 LINE L1 6380 7644 0 1 1489 238 245 12 52 chr13 118585656 118585828 -1698484 + CT-rich Low_complexity Low_complexity 4 168 0 1 1489 226 175 0 0 chr13 118587209 118587249 -1697063 + HAL1 LINE L1 1563 1602 -905 1 1489 1038 96 0 0 chr13 118587288 118587434 -1696878 - B1_Mus2 SINE Alu 0 147 2 1 1489 2637 51 6 0 chr13 118587451 118587786 -1696526 - L1_Mus1 LINE L1 -4 6563 6227 1 1489 3291 51 2 0 chr13 118588787 118589201 -1695111 + L1_Mus2 LINE L1 6151 6565 -1 1 1489 474 18 0 0 chr13 118589503 118589558 -1694754 + (TG)n Simple_repeat Simple_repeat 2 56 0 1 1489 223 241 0 94 chr13 118589778 118589842 -1694470 - B4 SINE B4 -229 63 6 1 1489 913 222 47 16 chr13 118590562 118590754 -1693558 - B3 SINE B2 -1 215 18 1 1489 343 333 43 0 chr13 118591436 118591553 -1692759 + MER2 DNA MER2_type 1 122 -223 1 1489 919 107 48 48 chr13 118592081 118592234 -1692078 + B2_Mm2 SINE B2 20 176 -19 1 1489 183 80 0 0 chr13 118592234 118592259 -1692053 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 1 1489 919 107 48 48 chr13 118592259 118592272 -1692040 + B2_Mm2 SINE B2 177 186 -9 1 1489 526 109 205 18 chr13 118592273 118592385 -1691927 + BC1_Mm scRNA scRNA 1 133 -19 1 1489 2280 63 3 25 chr13 118592708 118593035 -1691277 - L1_Mm LINE L1 -962 4921 4602 1 1489 7138 55 23 29 chr13 118593035 118593998 -1690314 + L1Md_F2 LINE L1 5625 6581 -1 1 1489 504 287 47 30 chr13 118594528 118594697 -1689615 + B3A SINE B2 1 172 -26 1 1489 308 161 16 0 chr13 118594787 118594849 -1689463 + CT-rich Low_complexity Low_complexity 3 65 0 1 1489 1588 320 81 16 chr13 118594861 118595630 -1688682 - Lx8 LINE L1 -50 7423 6605 1 1489 265 271 48 77 chr13 118595683 118595787 -1688525 + Lx7 LINE L1 6813 6913 -783 1 1489 721 257 54 0 chr13 118596175 118596397 -1687915 + Lx7 LINE L1 7184 7417 -279 1 1489 229 314 0 14 chr13 118596410 118596481 -1687831 + CT-rich Low_complexity Low_complexity 1 70 0 1 1489 452 177 109 31 chr13 118596481 118596609 -1687703 + Lx7 LINE L1 7559 7696 0 1 1489 269 337 36 21 chr13 118596749 118596943 -1687369 - L1MA8 LINE L1 -33 6258 6062 1 1489 486 0 0 0 chr13 118597424 118597478 -1686834 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 1 1489 423 0 0 0 chr13 118597478 118597525 -1686787 + (CA)n Simple_repeat Simple_repeat 2 48 0 1 1489 276 53 0 0 chr13 118597574 118597612 -1686700 + (TC)n Simple_repeat Simple_repeat 1 38 0 1 1489 468 0 0 0 chr13 118597612 118597664 -1686648 + (TA)n Simple_repeat Simple_repeat 1 52 0 1 1489 21 0 0 0 chr13 118598395 118598416 -1685896 + AT_rich Low_complexity Low_complexity 1 21 0 1 1489 530 313 126 5 chr13 118599602 118599801 -1684511 - MLT1A1 LTR MaLR -3 405 183 1 1489 24 53 0 0 chr13 118600244 118600282 -1684030 + AT_rich Low_complexity Low_complexity 1 38 0 1 1489 356 165 18 0 chr13 118600470 118600579 -1683733 + (CAGA)n Simple_repeat Simple_repeat 2 112 0 1 1489 21 0 0 0 chr13 118600698 118600719 -1683593 + AT_rich Low_complexity Low_complexity 1 21 0 1 1489 825 296 18 9 chr13 118600920 118601145 -1683167 - ORR1E LTR MaLR -128 231 5 1 1489 28 0 0 0 chr13 118601749 118601777 -1682535 + AT_rich Low_complexity Low_complexity 1 28 0 1 1489 22 0 0 0 chr13 118602097 118602119 -1682193 + AT_rich Low_complexity Low_complexity 1 22 0 1 1489 535 242 19 25 chr13 118602803 118602964 -1681348 - Lx6 LINE L1 -4 7456 7297 1 1489 21 0 0 0 chr13 118603035 118603056 -1681256 + AT_rich Low_complexity Low_complexity 1 21 0 1 1489 5904 244 68 53 chr13 118603073 118603227 -1681085 - Lx7 LINE L1 -149 7547 7381 1 1489 183 42 0 0 chr13 118603227 118603251 -1681061 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1 1489 5904 244 68 53 chr13 118603251 118603629 -1680683 - Lx7 LINE L1 -316 7380 7024 1 1489 1462 193 19 35 chr13 118603629 118603945 -1680367 - Lx4A LINE L1 -4 7054 6744 1 1489 5904 244 68 53 chr13 118603945 118603959 -1680353 - Lx7 LINE L1 -673 7023 7023 1 1489 261 0 0 0 chr13 118603959 118603988 -1680324 + (TTTTG)n Simple_repeat Simple_repeat 1 29 0 1 1489 5904 244 68 53 chr13 118603988 118605257 -1679055 - Lx7 LINE L1 -673 7023 5703 1 1489 2016 205 179 23 chr13 118605261 118605739 -1678573 - Lx7 LINE L1 -756 5124 4623 1 1489 342 0 0 0 chr13 118605739 118605777 -1678535 + (TG)n Simple_repeat Simple_repeat 2 39 0 1 1489 2016 205 179 23 chr13 118605777 118605906 -1678406 - Lx7 LINE L1 -1258 4622 4422 1 1489 7880 54 5 0 chr13 118605918 118607372 -1676940 - L1Md_F3 LINE L1 -14 6570 5109 1 1489 701 216 34 0 chr13 118607375 118607551 -1676761 - Lx7 LINE L1 -1455 4425 4244 1 1489 376 38 73 24 chr13 118607925 118608007 -1676305 + (GTTTG)n Simple_repeat Simple_repeat 2 87 0 1 1489 1107 64 35 0 chr13 118608020 118608161 -1676151 - B1_Mus1 SINE Alu -1 147 2 1 1489 25 51 0 0 chr13 118608323 118608362 -1675950 + AT_rich Low_complexity Low_complexity 1 39 0 1 1489 201 39 0 0 chr13 118609442 118609468 -1674844 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1 1489 243 326 0 21 chr13 118610419 118610513 -1673799 + ID_B1 SINE B4 132 223 -1 1 1489 303 68 0 0 chr13 118610534 118610545 -1673767 + (A)n Simple_repeat Simple_repeat 1 11 0 2 1489 1038 110 7 0 chr13 118610545 118610691 -1673621 + B1_Mus1 SINE Alu 2 148 0 2 1489 303 68 0 0 chr13 118610691 118610723 -1673589 + (A)n Simple_repeat Simple_repeat 1 32 0 2 1489 454 0 16 32 chr13 118611172 118611235 -1673077 + (TTTTG)n Simple_repeat Simple_repeat 2 63 0 2 1489 906 52 0 0 chr13 118613221 118613337 -1670975 + (TCTA)n Simple_repeat Simple_repeat 3 118 0 2 1489 180 0 0 0 chr13 118613364 118613384 -1670928 + (T)n Simple_repeat Simple_repeat 1 20 0 2 1489 7140 120 18 93 chr13 118613384 118614591 -1669721 - Lx3_Mus LINE L1 -482 6527 5375 2 1489 266 259 43 0 chr13 118614591 118614707 -1669605 + ORR1B1-int LTR MaLR 634 754 -755 2 1489 1068 65 7 0 chr13 118614608 118614746 -1669566 + B1_Mus1 SINE Alu 10 148 0 2 1489 7140 120 18 93 chr13 118614746 118616121 -1668191 - Lx3_Mus LINE L1 -482 5374 4060 2 1489 1159 109 132 0 chr13 118616120 118616294 -1668018 + Lx3_Mus LINE L1 6536 6732 -277 2 1489 418 333 42 0 chr13 118616294 118616438 -1667874 - MTE2a LTR MaLR -35 344 195 2 1489 342 289 0 0 chr13 118616487 118616570 -1667742 + MTE2b LTR MaLR 297 379 0 2 1489 643 323 21 5 chr13 118616572 118616765 -1667547 + ID_B1 SINE B4 6 201 -23 2 1489 309 125 0 0 chr13 118616769 118616825 -1667487 + (TG)n Simple_repeat Simple_repeat 1 56 0 2 1489 534 70 0 0 chr13 118617588 118617659 -1666653 + (TA)n Simple_repeat Simple_repeat 1 71 0 2 1489 278 302 12 0 chr13 118617795 118617881 -1666431 - Lx9 LINE L1 -354 7290 7204 2 1490 21 36 0 0 chr13 118620236 118620264 -1664048 + AT_rich Low_complexity Low_complexity 1 28 0 2 1490 239 268 108 12 chr13 118620446 118620529 -1663783 + MTE2b LTR MaLR 1 91 -288 2 1490 540 304 112 115 chr13 118620541 118621012 -1663300 + MT2A LTR ERVL 56 525 -8 2 1490 351 0 0 0 chr13 118621988 118622027 -1662285 + (CA)n Simple_repeat Simple_repeat 2 40 0 2 1490 198 358 170 13 chr13 118622114 118622267 -1662045 - L3 LINE CR1 -348 4141 3965 2 1490 613 164 8 0 chr13 118622367 118622533 -1661779 - L1_Mus4 LINE L1 0 6636 6498 2 1490 615 306 17 141 chr13 118622674 118623077 -1661235 + Lx9 LINE L1 6407 6759 -885 2 1490 543 16 0 0 chr13 118623259 118623323 -1660989 + (TG)n Simple_repeat Simple_repeat 2 65 0 2 1490 269 276 9 45 chr13 118623961 118624071 -1660241 - L1M2 LINE L1 -706 5597 5492 2 1490 331 268 82 32 chr13 118624055 118624213 -1660099 - L1_Mur3 LINE L1 -368 5512 5347 2 1490 730 292 30 5 chr13 118624427 118624630 -1659682 - B3 SINE B2 -7 209 2 2 1490 507 272 61 63 chr13 118624702 118624987 -1659325 - L1M2 LINE L1 -1019 5124 4810 2 1490 2347 73 18 12 chr13 118625186 118625520 -1658792 + L1_Mus3 LINE L1 6303 6638 0 2 1490 681 194 0 0 chr13 118626822 118627002 -1657310 + (TG)n Simple_repeat Simple_repeat 1 180 0 2 1490 201 147 0 0 chr13 118627003 118627037 -1657275 + (CATA)n Simple_repeat Simple_repeat 2 35 0 2 1490 435 264 113 43 chr13 118627061 118627284 -1657028 - B3A SINE B2 0 216 4 2 1490 22 0 0 0 chr13 118627962 118627984 -1656328 + AT_rich Low_complexity Low_complexity 1 22 0 2 1490 27 29 0 0 chr13 118628208 118628242 -1656070 + AT_rich Low_complexity Low_complexity 1 34 0 2 1490 231 36 0 0 chr13 118628319 118628347 -1655965 + (CA)n Simple_repeat Simple_repeat 1 28 0 2 1490 2662 189 23 36 chr13 118628348 118628923 -1655389 - Lx4B LINE L1 -26 7032 6466 2 1490 27 29 0 0 chr13 118629372 118629406 -1654906 + AT_rich Low_complexity Low_complexity 1 34 0 2 1490 21 57 0 0 chr13 118629517 118629552 -1654760 + AT_rich Low_complexity Low_complexity 1 35 0 2 1490 207 0 0 0 chr13 118630158 118630181 -1654131 + (TA)n Simple_repeat Simple_repeat 1 23 0 2 1490 850 130 7 7 chr13 118630802 118630941 -1653371 - MTB_Mm LTR MaLR -268 139 1 2 1490 5287 228 24 16 chr13 118630957 118632149 -1652163 - Lx7 LINE L1 -361 7335 6134 2 1490 1614 65 19 0 chr13 118632359 118632573 -1651739 - L1_Mus1 LINE L1 -3 6564 6347 2 1490 304 116 0 0 chr13 118632573 118632616 -1651696 + L1_Mus1 LINE L1 6306 6348 -219 2 1490 244 276 40 0 chr13 118632842 118632918 -1651394 + Lx8 LINE L1 7178 7256 -217 2 1490 561 15 0 0 chr13 118633183 118633249 -1651063 + (TG)n Simple_repeat Simple_repeat 1 66 0 2 1490 465 104 0 0 chr13 118633249 118633326 -1650986 + (GA)n Simple_repeat Simple_repeat 2 78 0 2 1490 236 183 230 70 chr13 118636362 118636462 -1647850 - MER57C2 LTR ERV1 -271 163 48 2 1490 189 0 0 0 chr13 118636556 118636577 -1647735 + (A)n Simple_repeat Simple_repeat 1 21 0 2 1490 1425 275 33 16 chr13 118636597 118637026 -1647286 + Lx8 LINE L1 6866 7301 -172 2 1490 231 191 0 0 chr13 118637048 118637095 -1647217 + (CA)n Simple_repeat Simple_repeat 2 48 0 2 1490 302 271 25 125 chr13 118637095 118637255 -1647057 + HAL1-3A_ME LINE L1 1975 2118 -740 2 1490 1368 67 0 0 chr13 118638189 118638368 -1645944 + L1Md_T LINE L1 6404 6582 0 2 1490 1690 67 9 0 chr13 118639663 118639887 -1644425 - L1_Mus1 LINE L1 0 6567 6342 2 1490 2814 217 83 13 chr13 118641598 118642276 -1642036 + RMER1C Other Other 614 1338 -4 2 1490 453 180 26 35 chr13 118642313 118642428 -1641884 + Lx9 LINE L1 6988 7101 -543 2 1490 853 157 201 5 chr13 118642452 118642563 -1641749 + Lx9 LINE L1 7370 7491 -153 2 1490 219 36 0 0 chr13 118642563 118642591 -1641721 + (CATATA)n Simple_repeat Simple_repeat 3 30 0 2 1490 853 157 201 5 chr13 118642591 118642703 -1641609 + Lx9 LINE L1 7492 7637 -7 2 1490 21 36 0 0 chr13 118644048 118644076 -1640236 + AT_rich Low_complexity Low_complexity 1 28 0 2 1490 507 78 0 0 chr13 118644360 118644437 -1639875 + (CA)n Simple_repeat Simple_repeat 2 78 0 2 1490 3522 41 47 5 chr13 118644689 118645135 -1639177 + L1Md_F2 LINE L1 6112 6576 -6 2 1490 225 65 0 0 chr13 118647039 118647070 -1637242 + (CA)n Simple_repeat Simple_repeat 2 32 0 2 1490 324 119 0 0 chr13 118647086 118647145 -1637167 + (GA)n Simple_repeat Simple_repeat 2 60 0 2 1490 23 33 0 0 chr13 118647158 118647188 -1637124 + AT_rich Low_complexity Low_complexity 1 30 0 2 1490 231 343 71 0 chr13 118649308 118649378 -1634934 + B1F SINE Alu 10 84 -65 2 1490 34 55 0 0 chr13 118649572 118649627 -1634685 + AT_rich Low_complexity Low_complexity 1 55 0 2 1490 21 0 0 0 chr13 118649867 118649888 -1634424 + AT_rich Low_complexity Low_complexity 1 21 0 2 1490 3977 94 138 15 chr13 118650056 118650706 -1633606 - RMER19A LTR ERVK -7 730 1 2 1490 283 342 135 45 chr13 118650710 118650866 -1633446 - Arthur1 DNA Tip100 -3661 286 117 2 1490 3575 44 0 0 chr13 118650918 118651369 -1632943 + L1_Mm LINE L1 3932 4382 -1501 2 1490 1240 131 9 5 chr13 118651446 118651661 -1632651 - Lx2 LINE L1 0 6997 6782 2 1490 330 235 38 150 chr13 118651770 118651930 -1632382 - L1MA5 LINE L1 -365 5935 5794 2 1490 8449 124 33 6 chr13 118652784 118654102 -1630210 - Lx3A LINE L1 -7 6974 5622 2 1490 424 326 82 41 chr13 118654764 118654911 -1629401 + RSINE1 SINE B4 13 165 0 2 1490 527 268 8 0 chr13 118655106 118655229 -1629083 + B1_Mur4 SINE Alu 14 137 -13 2 1490 246 32 0 0 chr13 118655229 118655260 -1629052 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 2 1490 216 271 0 20 chr13 118655271 118655320 -1628992 + PB1D10 SINE Alu 46 93 -24 2 1490 946 88 14 0 chr13 118655416 118655563 -1628749 + (TC)n Simple_repeat Simple_repeat 2 150 0 2 1490 13870 92 16 5 chr13 118655719 118658410 -1625902 + L1_Mus2 LINE L1 3851 6566 0 2 1490 469 304 7 29 chr13 118658592 118658731 -1625581 + B1_Mur3 SINE Alu 4 139 -10 2 1490 276 0 0 64 chr13 118658731 118658778 -1625534 + (TTAAA)n Simple_repeat Simple_repeat 2 45 0 2 1490 320 204 68 97 chr13 118658872 118658975 -1625337 + MT2B LTR ERVL 158 257 -344 2 1490 592 228 51 14 chr13 118658884 118659022 -1625290 + B1_Mur3 SINE Alu 7 149 0 2 1490 522 111 11 0 chr13 118660074 118660164 -1624148 - Lx2 LINE L1 -5 6992 6902 2 1490 407 396 90 57 chr13 118660202 118660398 -1623914 + MER45R DNA Tip100 1 202 -1379 2 1490 261 75 0 0 chr13 118660398 118660438 -1623874 + (CA)n Simple_repeat Simple_repeat 2 41 0 2 1490 407 396 90 57 chr13 118660438 118660729 -1623583 + MER45R DNA Tip100 203 504 -1077 2 1490 405 225 123 8 chr13 118660747 118660789 -1623523 + MER45R DNA Tip100 807 847 -734 2 1490 183 42 0 0 chr13 118660789 118660813 -1623499 + (CA)n Simple_repeat Simple_repeat 2 25 0 2 1490 405 225 123 8 chr13 118660813 118660900 -1623412 + MER45R DNA Tip100 848 950 -631 2 1490 336 264 35 0 chr13 118660921 118661008 -1623304 + L1MD2 LINE L1 6047 6136 -223 2 1490 1437 257 89 43 chr13 118661198 118661829 -1622483 + MER45R DNA Tip100 922 1581 0 2 1490 260 19 75 19 chr13 118662139 118662192 -1622120 + (CAAA)n Simple_repeat Simple_repeat 2 57 0 2 1490 26 30 0 0 chr13 118663008 118663041 -1621271 + AT_rich Low_complexity Low_complexity 1 33 0 2 1490 595 337 26 11 chr13 118663124 118663313 -1620999 + ID_B1 SINE B4 12 203 -21 2 1490 24 32 0 0 chr13 118663313 118663344 -1620968 + AT_rich Low_complexity Low_complexity 1 31 0 2 1490 772 201 77 19 chr13 118663619 118663704 -1620608 + Lx LINE L1 6434 6524 -130 2 1490 231 36 0 0 chr13 118663704 118663732 -1620580 + (TGGG)n Simple_repeat Simple_repeat 1 28 0 2 1490 772 201 77 19 chr13 118663732 118663854 -1620458 + Lx LINE L1 6525 6652 -2 2 1490 24 67 0 0 chr13 118663997 118664042 -1620270 + AT_rich Low_complexity Low_complexity 1 45 0 2 1490 209 213 0 16 chr13 118664124 118664186 -1620126 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 2 1490 207 69 0 0 chr13 118664390 118664419 -1619893 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 2 1490 632 295 33 0 chr13 118664427 118664637 -1619675 - Lx6 LINE L1 -169 7291 7075 2 1490 1433 231 3 0 chr13 118664648 118664934 -1619378 - Lx6 LINE L1 -721 6739 6453 2 1490 205 0 26 79 chr13 118665565 118665603 -1618709 + (TTTTTA)n Simple_repeat Simple_repeat 1 36 0 2 1490 2291 106 48 16 chr13 118665605 118665978 -1618334 - Lx LINE L1 -4 6650 6266 2 1490 423 0 0 0 chr13 118666008 118666055 -1618257 + (TG)n Simple_repeat Simple_repeat 2 48 0 2 1490 291 259 0 49 chr13 118666055 118666116 -1618196 - PB1D7 SINE Alu -11 109 52 2 1490 23 33 0 0 chr13 118666122 118666152 -1618160 + AT_rich Low_complexity Low_complexity 1 30 0 2 1490 333 297 35 26 chr13 118666446 118666560 -1617752 - PB1 SINE Alu 0 127 13 2 1490 295 176 67 100 chr13 118667475 118667595 -1616717 - Lx9 LINE L1 -1 7643 7528 2 1490 302 107 18 0 chr13 118667596 118667652 -1616660 + (TA)n Simple_repeat Simple_repeat 1 57 0 3 1490 23 68 0 0 chr13 118667818 118667862 -1616450 + AT_rich Low_complexity Low_complexity 1 44 0 3 1490 2092 122 24 6 chr13 118668489 118668819 -1615493 + Lx LINE L1 6315 6650 -4 3 1490 187 333 107 39 chr13 118668967 118669070 -1615242 - MIRm SINE MIR -2 274 165 3 1490 2531 96 18 13 chr13 118671032 118671413 -1612899 - L1Md_F2 LINE L1 0 6582 6200 3 1490 218 289 91 13 chr13 118672311 118672388 -1611924 + ID4 SINE ID 1 83 0 3 1490 387 0 0 0 chr13 118672625 118672668 -1611644 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 3 1490 369 109 0 0 chr13 118672728 118672783 -1611529 + (TTTA)n Simple_repeat Simple_repeat 4 58 0 3 1490 429 284 81 33 chr13 118672785 118672996 -1611316 - RLTR15 LTR ERVK -94 265 45 3 1490 621 0 0 0 chr13 118673177 118673246 -1611066 + (GGAA)n Simple_repeat Simple_repeat 2 70 0 3 1490 872 63 0 0 chr13 118674614 118674741 -1609571 - L1Md_F2 LINE L1 -3 6579 6453 3 1490 3967 5 0 0 chr13 118675185 118675628 -1608684 - L1Md_A LINE L1 0 6582 6140 3 1490 234 0 0 0 chr13 118675859 118675885 -1608427 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 3 1490 22 0 0 0 chr13 118676486 118676508 -1607804 + AT_rich Low_complexity Low_complexity 1 22 0 3 1490 181 247 115 115 chr13 118677372 118677468 -1606844 - MER5A DNA MER1_type -36 153 58 3 1490 422 311 66 38 chr13 118677588 118677774 -1606538 + MIR3 SINE MIR 2 185 -23 3 1490 600 155 0 0 chr13 118679142 118679239 -1605073 + Lx2 LINE L1 6547 6643 -354 3 1490 1208 148 0 5 chr13 118679239 118679449 -1604863 + Lx2 LINE L1 6775 6983 -14 3 1490 327 159 131 80 chr13 118680671 118680808 -1603504 + Lx7 LINE L1 7389 7532 -164 3 1490 243 150 0 0 chr13 118681483 118681526 -1602786 - PB1D10 SINE Alu -5 144 77 3 1490 24 0 0 0 chr13 118682681 118682705 -1601607 + AT_rich Low_complexity Low_complexity 1 24 0 3 1490 26 50 0 0 chr13 118682873 118682913 -1601399 + AT_rich Low_complexity Low_complexity 1 40 0 3 1490 244 284 15 0 chr13 118683948 118684015 -1600297 + ID4 SINE ID 3 70 -13 3 1490 288 0 0 0 chr13 118684114 118684146 -1600166 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 3 1490 282 363 112 8 chr13 118684876 118685001 -1599311 + B4A SINE B4 135 272 -20 3 1490 198 156 0 0 chr13 118685100 118685145 -1599167 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 3 1490 642 288 49 38 chr13 118685154 118685500 -1598812 + L1MA4 LINE L1 5677 6026 -274 3 1490 21 57 0 0 chr13 118685606 118685641 -1598671 + AT_rich Low_complexity Low_complexity 1 35 0 3 1490 191 330 48 29 chr13 118687185 118687288 -1597024 - MER5A DNA MER1_type -40 149 45 3 1490 417 337 44 51 chr13 118687323 118687617 -1596695 + B4A SINE B4 1 292 0 3 1490 277 292 0 0 chr13 118687618 118687690 -1596622 + (CATA)n Simple_repeat Simple_repeat 4 75 0 3 1490 372 22 0 0 chr13 118687897 118687942 -1596370 + (CA)n Simple_repeat Simple_repeat 2 46 0 3 1490 29 47 0 0 chr13 118687980 118688023 -1596289 + AT_rich Low_complexity Low_complexity 1 43 0 3 1490 1015 138 0 7 chr13 118688096 118688242 -1596070 - B1_Mus1 SINE Alu -1 147 3 3 1490 534 43 0 0 chr13 118688416 118688485 -1595827 + (CAAAA)n Simple_repeat Simple_repeat 2 70 0 3 1490 3897 73 6 9 chr13 118688804 118689346 -1594966 + L1_Mus3 LINE L1 6092 6631 -7 3 1490 769 145 267 0 chr13 118690086 118690258 -1594054 - URR1A DNA MER1_type -8 218 1 3 1490 393 256 142 47 chr13 118690364 118690491 -1593821 + B1_Mur3 SINE Alu 1 139 -10 3 1490 414 57 0 0 chr13 118690504 118690557 -1593755 + (TG)n Simple_repeat Simple_repeat 2 54 0 3 1490 21 57 0 0 chr13 118690875 118690910 -1593402 + AT_rich Low_complexity Low_complexity 1 35 0 3 1490 1449 122 26 34 chr13 118692148 118692412 -1591900 + Lx LINE L1 6393 6654 0 3 1490 244 361 44 44 chr13 118694895 118695031 -1589281 + L2c LINE L2 3250 3385 -2 3 1490 730 303 209 18 chr13 118695260 118695599 -1588713 + MTD LTR MaLR 16 419 0 3 1490 379 341 80 22 chr13 118696508 118696733 -1587579 + MLT1A LTR MaLR 136 373 -1 3 1490 1239 162 14 0 chr13 118697246 118697468 -1586844 - URR1A DNA MER1_type 0 226 2 3 1490 184 244 22 0 chr13 118697616 118697661 -1586651 + MIR SINE MIR 71 116 -146 3 1490 237 33 0 0 chr13 118697674 118697704 -1586608 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 3 1490 1222 35 0 0 chr13 118697704 118697849 -1586463 - B1_Mm SINE Alu -2 145 1 3 1490 1279 142 75 0 chr13 118697893 118698119 -1586193 + Lx LINE L1 6410 6652 -2 3 1490 225 154 0 0 chr13 118698282 118698321 -1585991 + A-rich Low_complexity Low_complexity 1 39 0 3 1490 1030 130 6 6 chr13 118698323 118698501 -1585811 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 3 1490 21 71 0 0 chr13 118699972 118700014 -1584298 + AT_rich Low_complexity Low_complexity 1 42 0 3 1490 1222 48 0 0 chr13 118700203 118700349 -1583963 + B1_Mus2 SINE Alu 2 147 0 3 1490 207 0 0 0 chr13 118700353 118700376 -1583936 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 3 1490 231 140 0 0 chr13 118700428 118700478 -1583834 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1490 1230 254 31 51 chr13 118700906 118701258 -1583054 - ORR1E LTR MaLR -9 350 6 3 1490 984 200 14 28 chr13 118701625 118701841 -1582471 - MTB_Mm LTR MaLR 0 407 195 3 1490 880 195 0 17 chr13 118701810 118701987 -1582325 - MT2B LTR ERVL -153 448 275 3 1490 2694 37 0 0 chr13 118701988 118702311 -1582001 + L1Md_F2 LINE L1 6029 6351 -231 3 1490 637 189 19 88 chr13 118702371 118702537 -1581775 - MT2B LTR ERVL -312 163 1 3 1490 31 68 0 0 chr13 118702921 118702980 -1581332 + AT_rich Low_complexity Low_complexity 1 59 0 3 1490 21 0 0 0 chr13 118703218 118703239 -1581073 + AT_rich Low_complexity Low_complexity 1 21 0 3 1490 322 296 33 50 chr13 118704534 118704655 -1579657 - MLT1A LTR MaLR -3 371 253 3 1490 25 0 0 0 chr13 118704970 118704995 -1579317 + AT_rich Low_complexity Low_complexity 1 25 0 3 1490 22 0 0 0 chr13 118705640 118705662 -1578650 + AT_rich Low_complexity Low_complexity 1 22 0 3 1490 463 310 129 0 chr13 118706339 118706494 -1577818 + B3 SINE B2 30 204 -12 3 1490 489 309 125 40 chr13 118706516 118706843 -1577469 - Charlie5 DNA MER1_type -5 2619 2265 3 1490 293 336 16 56 chr13 118706857 118706983 -1577329 - Charlie5 DNA MER1_type -2499 125 5 3 1490 1299 196 20 86 chr13 118707241 118707542 -1576770 - MTC LTR MaLR -100 321 41 3 1490 853 260 79 62 chr13 118707576 118707982 -1576330 - BGLII_B LTR ERVK -27 414 2 3 1490 23 0 0 0 chr13 118708097 118708120 -1576192 + AT_rich Low_complexity Low_complexity 1 23 0 3 1490 24 53 0 0 chr13 118709138 118709176 -1575136 + AT_rich Low_complexity Low_complexity 1 38 0 3 1490 223 170 0 0 chr13 118709298 118709345 -1574967 + A-rich Low_complexity Low_complexity 3 49 0 3 1490 234 0 0 0 chr13 118710310 118710336 -1573976 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3 1490 27 49 0 0 chr13 118711797 118711838 -1572474 + AT_rich Low_complexity Low_complexity 1 41 0 3 1490 183 184 0 0 chr13 118712252 118712290 -1572022 + GA-rich Low_complexity Low_complexity 2 39 0 3 1490 21 0 0 0 chr13 118712823 118712844 -1571468 + AT_rich Low_complexity Low_complexity 1 21 0 3 1490 436 246 0 30 chr13 118712857 118712991 -1571321 - HAL1-2a_MD LINE L1 -530 2494 2365 3 1490 337 339 31 0 chr13 118713096 118713291 -1571021 - L1MA6 LINE L1 -331 5969 5769 3 1490 31 44 0 42 chr13 118714051 118714122 -1570190 + AT_rich Low_complexity Low_complexity 1 68 0 3 1490 21 36 0 0 chr13 118714153 118714181 -1570131 + AT_rich Low_complexity Low_complexity 1 28 0 3 1490 476 307 36 0 chr13 118715363 118715503 -1568809 + RSINE1 SINE B4 2 146 -19 3 1490 252 169 17 0 chr13 118716568 118716627 -1567685 - L1MC3 LINE L1 -1172 6613 6554 3 1490 2024 144 114 26 chr13 118716899 118717277 -1567035 - MTC LTR MaLR -8 413 3 3 1490 1178 48 0 0 chr13 118717357 118717502 -1566810 + B1_Mm SINE Alu 1 145 -2 3 1490 247 208 0 0 chr13 118717504 118717557 -1566755 + A-rich Low_complexity Low_complexity 1 53 0 3 1490 354 320 34 57 chr13 118717960 118718255 -1566057 - L1MD LINE L1 -1880 4266 3973 3 1490 21 36 0 0 chr13 118718316 118718344 -1565968 + AT_rich Low_complexity Low_complexity 1 28 0 3 1490 580 280 24 37 chr13 118718437 118718734 -1565578 - L1MC LINE L1 -2427 3719 3427 3 1490 1103 268 76 33 chr13 118719222 118719615 -1564697 - Lx9 LINE L1 -478 7166 6757 3 1490 504 333 13 34 chr13 118719656 118719892 -1564420 + Lx9 LINE L1 7198 7428 -216 3 1490 1171 131 5 15 chr13 118719887 118720089 -1564223 - L1_Mur1 LINE L1 -489 5397 5198 3 1490 190 94 78 0 chr13 118720139 118720203 -1564109 + (TA)n Simple_repeat Simple_repeat 1 69 0 3 1490 224 184 41 0 chr13 118720972 118721021 -1563291 + A-rich Low_complexity Low_complexity 2 52 0 3 1490 1618 36 0 20 chr13 118721565 118721747 -1562565 + L1_Mm LINE L1 5405 5586 -297 3 1490 8458 30 1 0 chr13 118721747 118722742 -1561570 + L1Md_T LINE L1 5587 6582 0 3 1490 1618 36 0 20 chr13 118722742 118722756 -1561556 + L1_Mm LINE L1 5587 5597 -286 3 1490 438 33 0 32 chr13 118723442 118723504 -1560808 - B1_Mus2 SINE Alu -1 146 87 3 1490 5846 96 0 2 chr13 118724279 118725091 -1559221 - L1_Mus4 LINE L1 0 6636 5827 3 1490 434 39 0 0 chr13 118725092 118725143 -1559169 + L1_Mur2 LINE L1 4693 4743 -1134 3 1490 533 145 117 44 chr13 118725149 118725286 -1559026 + L1_Mur2 LINE L1 5145 5291 -586 3 1490 2344 55 0 0 chr13 118725287 118725577 -1558735 + L1_Mus1 LINE L1 6278 6567 0 3 1490 1104 116 0 0 chr13 118726193 118726357 -1557955 + L1_Mm LINE L1 5289 5452 -431 3 1490 291 337 0 11 chr13 118726981 118727068 -1557244 + MER3 DNA MER1_type 5 90 -119 3 1490 263 290 0 0 chr13 118727240 118727302 -1557010 - ID_B1 SINE B4 -2 222 161 3 1490 366 305 59 0 chr13 118727760 118727878 -1556434 + MLT1A0 LTR MaLR 241 365 0 4 1490 2715 157 74 14 chr13 118728322 118728820 -1555492 - RLTR11A LTR ERVK 0 528 1 4 1490 646 198 119 50 chr13 118729038 118729240 -1555072 + Lx7 LINE L1 7461 7676 -20 4 1490 857 132 0 7 chr13 118729240 118729385 -1554927 + (TA)n Simple_repeat Simple_repeat 1 144 0 4 1490 359 320 8 8 chr13 118730302 118730428 -1553884 + MIR SINE MIR 110 235 -27 4 1490 24 32 0 0 chr13 118730812 118730843 -1553469 + AT_rich Low_complexity Low_complexity 1 31 0 4 1490 22 35 0 0 chr13 118730977 118731006 -1553306 + AT_rich Low_complexity Low_complexity 1 29 0 4 1490 501 17 0 0 chr13 118731285 118731343 -1552969 + (TC)n Simple_repeat Simple_repeat 2 59 0 4 1490 210 122 82 0 chr13 118731947 118731996 -1552316 + (TTATA)n Simple_repeat Simple_repeat 3 55 0 4 1490 550 230 6 6 chr13 118732352 118732527 -1551785 + CT-rich Low_complexity Low_complexity 1 175 0 4 1490 822 286 159 12 chr13 118732856 118733202 -1551110 - MT2A LTR ERVL -2 531 135 4 1490 441 54 0 0 chr13 118734880 118734936 -1549376 + (TA)n Simple_repeat Simple_repeat 2 57 0 4 1490 788 328 91 10 chr13 118734939 118735247 -1549065 - MTEa LTR MaLR -15 364 32 4 1490 26 0 0 0 chr13 118735509 118735535 -1548777 + AT_rich Low_complexity Low_complexity 1 26 0 4 1490 509 266 21 58 chr13 118737191 118737379 -1546933 - MER2 DNA MER2_type 0 345 165 4 1490 424 326 33 22 chr13 118737689 118737871 -1546441 - RMER15 LTR ERVL -55 520 337 4 1490 1238 105 16 11 chr13 118739275 118739458 -1544854 + B2_Mm2 SINE B2 3 186 -9 4 1490 330 26 0 0 chr13 118740319 118740358 -1543954 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1490 1027 299 36 50 chr13 118740922 118741285 -1543027 - MTE2a LTR MaLR 0 379 22 4 1490 27 29 0 0 chr13 118742004 118742038 -1542274 + AT_rich Low_complexity Low_complexity 1 34 0 4 1490 192 315 57 78 chr13 118742268 118742409 -1541903 - L2a LINE L2 -34 3392 3255 4 1490 186 43 0 0 chr13 118742419 118742442 -1541870 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4 1490 1017 74 0 0 chr13 118742442 118742577 -1541735 - B1_Mus1 SINE Alu -2 146 12 4 1490 327 49 0 0 chr13 118743417 118743458 -1540854 + (TC)n Simple_repeat Simple_repeat 2 42 0 4 1490 1205 55 0 0 chr13 118743873 118744019 -1540293 + B1_Mus2 SINE Alu 2 147 0 4 1490 201 60 19 74 chr13 118744023 118744077 -1540235 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 4 1490 897 268 6 0 chr13 118744533 118744716 -1539596 + B3 SINE B2 1 184 -32 4 1490 550 220 17 11 chr13 118746558 118746737 -1537575 + (TA)n Simple_repeat Simple_repeat 1 180 0 4 1490 926 63 0 8 chr13 118746741 118746868 -1537444 + (TAGA)n Simple_repeat Simple_repeat 4 129 0 4 1490 1858 213 34 109 chr13 118747235 118748232 -1536080 - RMER17B LTR ERVK -10 898 1 4 1490 424 333 71 71 chr13 118748532 118748758 -1535554 - B4A SINE B4 -2 290 65 4 1490 21 36 0 0 chr13 118749015 118749043 -1535269 + AT_rich Low_complexity Low_complexity 1 28 0 4 1490 444 347 89 24 chr13 118749591 118749883 -1534429 - Lx8 LINE L1 -93 7380 7070 4 1490 436 223 94 7 chr13 118750492 118750641 -1533671 - Lx7 LINE L1 0 7696 7535 4 1490 369 209 22 11 chr13 118750745 118750837 -1533475 - Lx7 LINE L1 -335 7361 7269 4 1490 3019 241 85 26 chr13 118750825 118751088 -1533224 + Lx7 LINE L1 5463 5752 -1944 4 186 1249 179 5 0 chr13 118751088 118751311 -1533001 - URR1A DNA MER1_type 0 226 3 4 1491 3019 230 95 24 chr13 118751311 118752008 -1532304 + Lx7 LINE L1 5753 6488 -1208 4 1491 7383 54 1 6 chr13 118752018 118752950 -1531362 - L1Md_F2 LINE L1 -2 6580 5654 4 1491 1106 90 0 22 chr13 118754472 118754654 -1529658 + (TTC)n Simple_repeat Simple_repeat 3 180 0 4 1491 817 100 36 36 chr13 118754657 118754937 -1529375 + CT-rich Low_complexity Low_complexity 1 280 0 4 1491 1124 114 0 6 chr13 118754958 118755135 -1529177 + (TCC)n Simple_repeat Simple_repeat 3 178 0 4 1491 698 110 70 14 chr13 118755135 118755423 -1528889 + CT-rich Low_complexity Low_complexity 1 304 0 4 1491 189 220 100 0 chr13 118758658 118758708 -1525604 - MIRm SINE MIR -2 274 220 4 1491 249 83 0 0 chr13 118759289 118759325 -1524987 + (TG)n Simple_repeat Simple_repeat 1 36 0 4 1491 477 381 0 12 chr13 118759327 118759489 -1524823 - RSINE1 SINE B4 -4 161 2 4 1491 412 217 260 5 chr13 118760002 118760206 -1524106 + Lx9 LINE L1 7388 7643 -1 4 1491 180 0 0 0 chr13 118761848 118761868 -1522444 + (T)n Simple_repeat Simple_repeat 1 20 0 4 1491 1596 241 74 28 chr13 118762516 118762947 -1521365 - Lx6 LINE L1 -5 7455 7005 4 1491 224 315 170 26 chr13 118763171 118763324 -1520988 + MER5B DNA MER1_type 4 178 0 4 1491 924 36 0 0 chr13 118764522 118764634 -1519678 + (CAG)n Simple_repeat Simple_repeat 1 112 0 4 1491 258 95 0 0 chr13 118765190 118765232 -1519080 + (TA)n Simple_repeat Simple_repeat 2 43 0 4 1491 206 118 0 0 chr13 118766068 118766102 -1518210 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 4 1491 25 0 0 0 chr13 118767118 118767143 -1517169 + AT_rich Low_complexity Low_complexity 1 25 0 4 1491 29 84 0 0 chr13 118767614 118767685 -1516627 + AT_rich Low_complexity Low_complexity 1 71 0 4 1491 807 217 200 0 chr13 118770680 118770860 -1513452 - B3 SINE B2 0 216 1 4 1491 244 381 14 7 chr13 118771516 118771656 -1512656 - MARNA DNA Mariner -179 407 267 4 1491 237 236 18 0 chr13 118772144 118772199 -1512113 + GA-rich Low_complexity Low_complexity 2 57 0 4 1491 1109 193 14 10 chr13 118772454 118772663 -1511649 + URR1B DNA MER1_type 16 225 0 4 1491 23 0 0 0 chr13 118773581 118773604 -1510708 + AT_rich Low_complexity Low_complexity 1 23 0 4 1491 189 213 0 0 chr13 118774346 118774393 -1509919 + T-rich Low_complexity Low_complexity 4 50 0 4 1491 448 339 54 0 chr13 118774455 118774567 -1509745 - B1F2 SINE Alu -20 129 12 4 1491 526 286 35 41 chr13 118775138 118775335 -1508977 + B3A SINE B2 1 196 -2 4 1491 371 309 79 24 chr13 118776312 118776598 -1507714 - B4A SINE B4 0 292 1 4 1491 242 112 74 12 chr13 118776617 118776698 -1507614 + (CAGA)n Simple_repeat Simple_repeat 2 87 0 4 1491 363 194 0 0 chr13 118777042 118777145 -1507167 + GA-rich Low_complexity Low_complexity 2 104 0 4 1491 289 335 119 40 chr13 118777155 118777332 -1506980 + B3A SINE B2 8 198 0 4 1491 33 56 0 0 chr13 118778231 118778285 -1506027 + AT_rich Low_complexity Low_complexity 1 54 0 4 1491 21 36 0 0 chr13 118778500 118778528 -1505784 + AT_rich Low_complexity Low_complexity 1 28 0 4 1491 515 223 70 125 chr13 118778814 118779014 -1505298 + B3 SINE B2 2 190 -5 4 1491 450 0 0 0 chr13 118779015 118779065 -1505247 + (TAAA)n Simple_repeat Simple_repeat 3 52 0 4 1491 422 285 86 52 chr13 118779298 118779472 -1504840 + Lx5 LINE L1 6871 7050 0 4 1491 423 250 68 43 chr13 118779720 118779837 -1504475 + PB1D9 SINE Alu 1 120 0 4 1491 23 33 0 0 chr13 118779967 118779997 -1504315 + AT_rich Low_complexity Low_complexity 1 30 0 4 1491 288 77 0 0 chr13 118780512 118780551 -1503761 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 4 1491 1570 266 73 50 chr13 118780978 118781500 -1502812 - RMER15 LTR ERVL 0 575 42 4 1491 1196 118 111 24 chr13 118781520 118781728 -1502584 - URR1A DNA MER1_type 0 226 1 4 1491 384 22 0 0 chr13 118781757 118781802 -1502510 + (CA)n Simple_repeat Simple_repeat 2 46 0 4 1491 855 178 80 50 chr13 118781802 118782003 -1502309 + RMER1C Other Other 1131 1337 -5 4 1491 246 324 33 13 chr13 118782086 118782186 -1502126 - B1F1 SINE Alu -6 114 7 4 1491 396 55 0 0 chr13 118782193 118782248 -1502064 + (TCTG)n Simple_repeat Simple_repeat 2 56 0 4 1491 402 374 0 0 chr13 118782251 118782366 -1501946 - ID_B1 SINE B4 -25 199 85 4 1491 342 334 84 12 chr13 118782495 118782713 -1501599 - MLT1A0 LTR MaLR -46 362 85 4 1491 12960 63 2 1 chr13 118782921 118784591 -1499721 + L1Md_F2 LINE L1 3914 5586 -297 4 1491 7317 55 32 9 chr13 118784591 118785488 -1498824 + L1Md_F2 LINE L1 5587 6481 -101 4 1491 180 77 0 0 chr13 118785488 118785514 -1498798 + (TGGG)n Simple_repeat Simple_repeat 3 28 0 4 1491 7317 55 32 9 chr13 118785514 118785578 -1498734 + L1Md_F2 LINE L1 6482 6570 -12 4 1491 1240 174 33 72 chr13 118785955 118786290 -1498022 - RLTRETN_Mm LTR ERVK 0 322 1 4 1491 192 234 0 0 chr13 118786740 118786787 -1497525 + GA-rich Low_complexity Low_complexity 4 50 0 4 1491 361 258 38 53 chr13 118787527 118787658 -1496654 + RMER12 LTR ERVK 770 898 -424 4 1491 535 293 100 35 chr13 118787647 118787877 -1496435 - MLT1A LTR MaLR -126 248 4 4 1491 251 354 62 16 chr13 118788045 118788174 -1496138 - MER5B DNA MER1_type -43 135 1 4 1491 231 103 0 0 chr13 118788185 118788224 -1496088 + (CAAAAA)n Simple_repeat Simple_repeat 2 40 0 4 1491 1331 226 34 20 chr13 118789417 118789715 -1494597 + Lx5 LINE L1 6746 7047 -3 4 1491 1156 227 4 12 chr13 118790176 118790421 -1493891 - MTD LTR MaLR -12 407 165 4 1491 799 188 206 0 chr13 118792112 118792282 -1492030 - B3 SINE B2 -9 207 3 4 1491 6419 84 1 24 chr13 118792554 118793446 -1490866 + L1_Mus2 LINE L1 5695 6566 0 4 1491 23 54 0 0 chr13 118793921 118793958 -1490354 + AT_rich Low_complexity Low_complexity 1 37 0 4 1491 678 270 111 67 chr13 118794015 118794376 -1489936 - MTE2b LTR MaLR -2 377 1 4 1491 1360 265 113 54 chr13 118794578 118794607 -1489705 - L1MC1 LINE L1 -128 6205 6181 4 1491 2979 66 30 8 chr13 118794607 118795003 -1489309 - MTB_Mm LTR MaLR -2 405 1 4 1491 1360 270 106 45 chr13 118795003 118796155 -1488157 - L1MC1 LINE L1 -153 6180 4952 4 1491 324 0 0 0 chr13 118796168 118796204 -1488108 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 4 1491 872 182 0 6 chr13 118796205 118796382 -1487930 + CT-rich Low_complexity Low_complexity 2 177 0 4 1491 990 120 32 27 chr13 118796404 118796592 -1487720 - Lx2A1 LINE L1 0 7008 6820 4 1491 2417 85 6 0 chr13 118796725 118797044 -1487268 - L1_Mm LINE L1 -201 5682 5362 5 1491 3061 102 0 0 chr13 118797046 118797486 -1486826 + L1_Mm LINE L1 4907 5346 -537 5 1491 5712 61 120 1 chr13 118797485 118798275 -1486037 + L1_Mus2 LINE L1 5687 6581 -1 5 1491 2694 227 134 35 chr13 118798356 118799197 -1485115 - Lx9 LINE L1 -50 7594 6670 5 1491 273 136 30 15 chr13 118799371 118799438 -1484874 + (TA)n Simple_repeat Simple_repeat 2 69 0 5 1491 789 58 0 0 chr13 118799795 118799898 -1484414 + (TCCC)n Simple_repeat Simple_repeat 3 105 0 5 1491 958 49 8 0 chr13 118799933 118800055 -1484257 - B1_Mm SINE Alu 0 147 25 5 1491 451 359 9 39 chr13 118800055 118800287 -1484025 - B4A SINE B4 -62 230 6 5 1491 412 379 0 0 chr13 118800426 118800587 -1483725 - Lx8 LINE L1 -135 7338 7178 5 1491 488 338 68 0 chr13 118800727 118800875 -1483437 + RSINE1 SINE B4 6 163 -2 5 1491 274 281 0 0 chr13 118800877 118800941 -1483371 + (CA)n Simple_repeat Simple_repeat 1 64 0 5 1491 286 340 0 107 chr13 118801074 118801182 -1483130 + MLT1E3 LTR MaLR 466 558 -66 5 1491 704 230 113 16 chr13 118801182 118801376 -1482936 - B3 SINE B2 -3 213 1 5 1491 286 340 0 107 chr13 118801376 118801445 -1482867 + MLT1E3 LTR MaLR 559 624 0 5 1491 21 71 0 0 chr13 118801585 118801627 -1482685 + AT_rich Low_complexity Low_complexity 1 42 0 5 1491 1431 287 71 11 chr13 118801852 118802317 -1481995 - Lx8 LINE L1 -5 7468 6976 5 1491 255 267 0 0 chr13 118803073 118803133 -1481179 + (CA)n Simple_repeat Simple_repeat 2 61 0 5 1491 573 232 0 0 chr13 118803849 118803961 -1480351 - PB1D9 SINE Alu -7 113 2 5 1491 266 320 85 55 chr13 118804278 118804513 -1479799 - MER46C DNA MER2_type -16 322 81 5 1491 391 59 112 0 chr13 118804719 118804871 -1479441 + (TA)n Simple_repeat Simple_repeat 1 169 0 5 1491 1023 168 86 5 chr13 118805183 118805392 -1478920 - URR1A DNA MER1_type 0 226 1 5 1491 677 232 22 0 chr13 118805489 118805627 -1478685 - B1_Mur1 SINE Alu -7 142 2 5 1491 424 93 0 0 chr13 118805978 118806032 -1478280 - L1_Mus4 LINE L1 -364 6272 6219 5 1491 247 303 39 48 chr13 118806075 118806179 -1478133 + ORR1D2 LTR MaLR 20 122 -252 5 1491 407 265 63 13 chr13 118806199 118806354 -1477958 + ORR1D2 LTR MaLR 201 366 -4 5 1491 4136 43 2 4 chr13 118806437 118806952 -1477360 - L1Md_F3 LINE L1 -3 6581 6068 5 1491 416 349 46 50 chr13 118807217 118807479 -1476833 + B4A SINE B4 1 261 -31 5 1491 1960 183 36 55 chr13 118809114 118809451 -1474861 - MTC LTR MaLR -13 408 70 5 1491 207 0 0 0 chr13 118809451 118809474 -1474838 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5 1491 1960 183 36 55 chr13 118809474 118809552 -1474760 - MTC LTR MaLR -352 69 1 5 1491 1084 222 19 125 chr13 118810545 118810968 -1473344 - RMER17C LTR ERVK -32 378 1 5 1491 3631 132 137 99 chr13 118810976 118811189 -1473123 - RMER17C-int LTR ERVK 0 3238 3021 5 1491 2646 76 15 23 chr13 118811189 118811525 -1472787 + L1_Mus3 LINE L1 6248 6587 -51 5 1491 5554 113 97 11 chr13 118811525 118812430 -1471882 - RLTR13C1 LTR ERVK 0 983 1 5 1491 2646 76 15 23 chr13 118812430 118812482 -1471830 + L1_Mus3 LINE L1 6588 6633 -5 5 1491 6603 149 77 80 chr13 118812482 118812875 -1471437 - RMER17C-int LTR ERVK -218 3020 2634 5 1491 269 204 0 20 chr13 118812875 118812925 -1471387 + LSU-rRNA_Hsa rRNA rRNA 4198 4246 -789 5 1491 6603 149 77 80 chr13 118812925 118814186 -1470126 - RMER17C-int LTR ERVK -218 2633 1390 5 1491 4618 135 27 25 chr13 118814186 118814991 -1469321 - RMER17D2 LTR ERVK -2 807 1 5 1491 6603 160 39 67 chr13 118814991 118815299 -1469013 - RMER17C-int LTR ERVK -1849 1389 1111 5 1491 205 146 0 47 chr13 118815432 118815475 -1468837 + C-rich Low_complexity Low_complexity 3 43 0 5 1491 893 281 102 104 chr13 118815696 118816529 -1467783 - RMER17C-int LTR ERVK -2405 833 3 5 1491 740 264 76 78 chr13 118816529 118816911 -1467401 - RMER17C LTR ERVK -29 381 1 5 1491 327 65 0 0 chr13 118816963 118817009 -1467303 + (CAGAGA)n Simple_repeat Simple_repeat 3 48 0 5 1491 780 199 78 97 chr13 118819099 118819296 -1465016 - ORR1C1 LTR MaLR 0 378 177 5 1491 845 99 7 0 chr13 118819296 118819448 -1464864 + (GA)n Simple_repeat Simple_repeat 2 154 0 5 1491 780 199 78 97 chr13 118819448 118819467 -1464845 - ORR1C1 LTR MaLR -202 176 166 5 1491 209 322 0 0 chr13 118819467 118819557 -1464755 + (ATATG)n Simple_repeat Simple_repeat 1 90 0 5 1491 857 164 7 0 chr13 118819560 118819700 -1464612 - ORR1C1 LTR MaLR -213 165 25 5 1491 452 72 14 0 chr13 118820181 118820250 -1464062 + (TC)n Simple_repeat Simple_repeat 2 71 0 5 1491 339 306 29 16 chr13 118820841 118820951 -1463361 - PB1D10 SINE Alu -33 116 5 5 1491 257 340 21 0 chr13 118821618 118821712 -1462600 - RMER15-int LTR ERVL -2794 2205 2110 5 1491 748 211 7 21 chr13 118821912 118822057 -1462255 - B1_Mur4 SINE Alu -1 149 7 5 1491 265 282 0 120 chr13 118821958 118822075 -1462237 - MT2B2 LTR ERVL -326 258 156 5 1491 1320 156 4 92 chr13 118824780 118825041 -1459271 - ORR1C2 LTR MaLR 0 384 147 5 1491 310 277 96 0 chr13 118825072 118825166 -1459146 + PB1D10 SINE Alu 1 103 -14 5 1491 2140 247 89 144 chr13 118825968 118826910 -1457402 + RMER1A Other Other 148 1030 0 5 1491 189 94 0 0 chr13 118826910 118826942 -1457370 + (CAAAAA)n Simple_repeat Simple_repeat 5 36 0 5 1491 1164 192 9 0 chr13 118827018 118827242 -1457070 - URR1A DNA MER1_type 0 226 1 5 1491 258 313 76 90 chr13 118827724 118827868 -1456444 + B4 SINE B4 8 149 -143 5 1491 255 103 0 0 chr13 118827974 118828013 -1456299 + (CA)n Simple_repeat Simple_repeat 2 40 0 5 1491 24 32 0 0 chr13 118828072 118828103 -1456209 + AT_rich Low_complexity Low_complexity 1 31 0 5 1491 469 235 107 29 chr13 118828121 118828327 -1455985 - MER33 DNA MER1_type -12 312 91 5 1491 329 236 256 18 chr13 118828349 118828517 -1455795 - B3 SINE B2 -4 212 5 5 1491 270 324 106 14 chr13 118828737 118828878 -1455434 - MIRb SINE MIR 0 268 115 5 1491 1817 163 3 16 chr13 118829115 118829421 -1454891 - RLTR14 LTR ERV1 -78 304 3 5 1491 231 204 0 0 chr13 118830001 118830055 -1454257 + T-rich Low_complexity Low_complexity 1 54 0 5 1491 3078 48 0 0 chr13 118831682 118832061 -1452251 + L1Md_A LINE L1 6204 6582 0 5 1491 1202 21 14 0 chr13 118832838 118832983 -1451329 - B1_Mm SINE Alu 0 147 1 5 1491 244 120 20 20 chr13 118833502 118833553 -1450759 + GA-rich Low_complexity Low_complexity 4 54 0 5 1491 253 179 27 0 chr13 118834331 118834443 -1449869 + (TAGA)n Simple_repeat Simple_repeat 4 118 0 5 1491 369 0 0 0 chr13 118834452 118834493 -1449819 + (TG)n Simple_repeat Simple_repeat 2 42 0 5 1491 6970 94 3 3 chr13 118834597 118835650 -1448662 - L1_Mm LINE L1 -1516 4367 3315 5 1491 2991 68 3 0 chr13 118835650 118836087 -1448225 + L1_Mus1 LINE L1 6183 6567 0 5 1491 180 0 0 0 chr13 118836798 118836818 -1447494 + (A)n Simple_repeat Simple_repeat 1 20 0 5 1491 632 296 68 32 chr13 118837195 118837474 -1446838 - B4A SINE B4 0 292 4 5 1491 331 282 127 53 chr13 118838479 118838707 -1445605 + LTR48 LTR ERV1 489 733 -54 5 1491 22 56 0 0 chr13 118839129 118839165 -1445147 + AT_rich Low_complexity Low_complexity 1 36 0 5 1491 294 29 0 0 chr13 118839956 118839991 -1444321 + (CA)n Simple_repeat Simple_repeat 1 35 0 5 1491 4129 40 2 47 chr13 118840748 118841275 -1443037 + RLTR1C LTR ERV1 1 503 0 5 1491 1963 182 85 60 chr13 118841275 118841795 -1442517 + MMVL30-int LTR ERV1 1 533 -7023 5 1491 4476 101 15 6 chr13 118842259 118842935 -1441377 + MMVL30-int LTR ERV1 772 1453 -2245 5 1491 639 138 55 119 chr13 118843022 118843302 -1441010 + MMVL30-int LTR ERV1 960 1511 -2187 5 1491 414 0 0 0 chr13 118843418 118843464 -1440848 + (GA)n Simple_repeat Simple_repeat 1 46 0 5 1491 4935 70 10 26 chr13 118843620 118844089 -1440223 + MMVL30-int LTR ERV1 1502 1969 -1729 5 1491 1414 84 0 0 chr13 118844089 118844280 -1440032 + B2_Mm2 SINE B2 1 191 -4 5 1491 8362 95 87 59 chr13 118844280 118845310 -1439002 + MMVL30-int LTR ERV1 1634 3103 -595 5 1491 2780 78 31 43 chr13 118845310 118845726 -1438586 + RLTR10A LTR ERVK 1 411 0 5 1491 8362 81 81 53 chr13 118845726 118846345 -1437967 + MMVL30-int LTR ERV1 3104 3698 0 5 1491 4135 54 0 14 chr13 118846347 118846855 -1437457 + RLTR1C LTR ERV1 3 503 0 5 1491 987 131 0 0 chr13 118846999 118847136 -1437176 - B1_Mus2 SINE Alu -10 137 1 5 1491 527 165 20 49 chr13 118847273 118847375 -1436937 - B1_Mur4 SINE Alu -8 142 44 5 1491 225 143 0 125 chr13 118847326 118847382 -1436930 - 4.5SRNA scRNA scRNA -6 88 40 5 1491 395 0 0 163 chr13 118847391 118847606 -1436706 + (CTCTG)n Simple_repeat Simple_repeat 1 180 0 5 1491 478 321 160 31 chr13 118847967 118848192 -1436120 + B4A SINE B4 1 254 -38 5 1491 2327 101 3 0 chr13 118848452 118848770 -1435542 + ORR1A2 LTR MaLR 1 319 -8 5 1491 5419 149 100 6 chr13 118848775 118850149 -1434163 + ORR1A2-int LTR MaLR 2 1254 -709 5 1491 6327 116 18 113 chr13 118851423 118852612 -1431700 + ORR1A2-int LTR MaLR 889 1963 0 5 1491 2024 128 25 6 chr13 118852612 118852935 -1431377 + ORR1A2 LTR MaLR 1 329 0 5 1491 382 259 158 0 chr13 118853219 118853337 -1430975 + B1F2 SINE Alu 8 141 -8 5 1491 366 23 0 0 chr13 118853438 118853481 -1430831 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 5 1491 1606 227 6 0 chr13 118853489 118853806 -1430506 - Lx5 LINE L1 -291 6759 6441 5 1491 788 295 48 37 chr13 118853805 118854076 -1430236 + Lx5 LINE L1 6758 7031 -19 5 1491 234 0 0 0 chr13 118854077 118854103 -1430209 + (CAAT)n Simple_repeat Simple_repeat 3 28 0 5 1491 224 91 0 22 chr13 118854135 118854180 -1430132 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 5 1491 359 127 26 35 chr13 118854295 118854409 -1429903 + (TCTCTG)n Simple_repeat Simple_repeat 2 114 0 5 1491 282 248 62 61 chr13 118854602 118854796 -1429516 + L1MD1 LINE L1 5255 5449 -793 5 1491 5215 128 6 4 chr13 118854815 118855617 -1428695 - Lx LINE L1 0 6654 5851 5 1491 209 57 0 28 chr13 118855634 118855670 -1428642 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5 1491 809 133 51 0 chr13 118855774 118855908 -1428404 + B2_Mm2 SINE B2 5 156 -42 5 1491 364 82 16 16 chr13 118855909 118855971 -1428341 + (TA)n Simple_repeat Simple_repeat 2 63 0 5 1491 467 289 115 15 chr13 118855991 118856368 -1427944 + L1MD1 LINE L1 5591 6019 -340 5 1491 23 33 0 0 chr13 118856591 118856621 -1427691 + AT_rich Low_complexity Low_complexity 1 30 0 5 1491 595 247 200 46 chr13 118856776 118857094 -1427218 - RLTR9A LTR ERVK -5 404 1 5 1491 417 329 108 13 chr13 118857094 118857473 -1426839 + L1MA8 LINE L1 5849 6263 -28 5 1491 319 296 59 22 chr13 118858835 118858970 -1425342 - L1MC4 LINE L1 -197 7845 7706 5 1491 1222 87 54 0 chr13 118859009 118859193 -1425119 + B2_Mm2 SINE B2 1 194 -1 5 1491 2501 91 36 46 chr13 118859323 118859738 -1424574 + IAPLTR2a LTR ERVK 1 411 0 5 1491 362 92 1 0 chr13 118859738 118859795 -1424517 + IAPEz-int LTR ERVK 3 58 -6423 5 1491 3304 73 4 33 chr13 118859793 118860536 -1423776 + IAPEz-int LTR ERVK 18 662 -5819 5 1491 940 42 0 0 chr13 118860536 118860655 -1423657 + IAPEz-int LTR ERVK 1359 1477 -5004 5 1491 1772 99 8 0 chr13 118860650 118860902 -1423410 + IAPEz-int LTR ERVK 2244 2497 -5183 5 1491 14398 42 3 3 chr13 118860920 118862724 -1421588 + IAPEz-int LTR ERVK 4678 6481 0 5 1491 2623 88 121 36 chr13 118862724 118863162 -1421150 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1491 1314 200 123 35 chr13 118863345 118863687 -1420625 + ORR1D1 LTR MaLR 1 372 -2 5 1491 24 0 0 0 chr13 118863715 118863739 -1420573 + AT_rich Low_complexity Low_complexity 1 24 0 5 1491 7488 30 1 1 chr13 118864382 118865303 -1419009 - L1Md_F3 LINE L1 -11 6573 5653 5 1491 1493 64 387 14 chr13 118865509 118865793 -1418519 + RLTR10 LTR ERVK 1 390 0 5 1491 857 217 49 155 chr13 118867379 118867738 -1416574 - RMER12 LTR ERVK -94 1228 699 6 1491 1514 267 48 67 chr13 118867706 118868546 -1415766 - RMER12 LTR ERVK -1047 801 3 6 1491 675 37 0 0 chr13 118868546 118868628 -1415684 + (TC)n Simple_repeat Simple_repeat 2 83 0 6 1491 379 269 32 0 chr13 118868820 118868913 -1415399 - RSINE1 SINE B4 -35 130 35 6 1491 32 43 0 0 chr13 118869018 118869064 -1415248 + AT_rich Low_complexity Low_complexity 1 46 0 6 1491 237 214 92 55 chr13 118870001 118870110 -1414202 - L1MC LINE L1 -819 5327 5215 6 1491 476 306 111 48 chr13 118870201 118870283 -1414029 + B3 SINE B2 1 98 -118 6 1491 682 72 0 35 chr13 118870283 118870399 -1413913 + L1Md_F2 LINE L1 6469 6580 -2 6 1491 476 306 111 48 chr13 118870399 118870505 -1413807 + B3 SINE B2 99 201 -15 6 1491 228 263 31 10 chr13 118870506 118870602 -1413710 + L1MA10 LINE L1 6233 6330 -4 6 1491 716 299 98 70 chr13 118870605 118870932 -1413380 - RLTR18B LTR ERVK -4 508 173 6 1491 662 252 0 7 chr13 118870988 118871132 -1413180 - B1_Mur2 SINE Alu -6 143 1 6 1491 2812 232 86 16 chr13 118871904 118872648 -1411664 - Lx5 LINE L1 -6 7044 6249 6 1491 960 146 0 0 chr13 118872676 118872840 -1411472 + (GAAA)n Simple_repeat Simple_repeat 1 164 0 6 1491 360 0 0 0 chr13 118872948 118872988 -1411324 + (TA)n Simple_repeat Simple_repeat 1 40 0 6 1491 22 0 0 0 chr13 118873357 118873379 -1410933 + AT_rich Low_complexity Low_complexity 1 22 0 6 1491 321 290 104 82 chr13 118873621 118873891 -1410421 + B4A SINE B4 1 276 -16 6 1491 21 36 0 0 chr13 118874654 118874682 -1409630 + AT_rich Low_complexity Low_complexity 1 28 0 6 1491 479 329 84 70 chr13 118875795 118876151 -1408161 - MLT1A0 LTR MaLR -2 363 3 6 1491 318 324 72 54 chr13 118876437 118876548 -1407764 - PB1D10 SINE Alu 0 117 5 6 1491 330 360 35 0 chr13 118877417 118877531 -1406781 - B1_Mur2 SINE Alu -30 119 2 6 1491 258 340 0 80 chr13 118877896 118878008 -1406304 - MIRb SINE MIR 0 268 166 6 1491 270 0 0 0 chr13 118878454 118878484 -1405828 + (TTG)n Simple_repeat Simple_repeat 1 30 0 6 1491 330 254 156 11 chr13 118879120 118879226 -1405086 - MIRc SINE MIR -17 191 72 6 1491 274 328 38 42 chr13 118880113 118880349 -1403963 + HERV16-int LTR ERVL 1859 2093 -2903 6 1491 688 330 91 26 chr13 118880964 118881362 -1402950 + MLT1C LTR MaLR 5 388 -2 6 1492 641 275 33 58 chr13 118882620 118882832 -1401480 - B3A SINE B2 0 216 8 6 1492 363 360 13 25 chr13 118883351 118883508 -1400804 - LTR16E1 LTR ERVL -84 454 300 6 1492 102 15 0 22 chr13 118883564 118883699 -1400613 + AT_rich Low_complexity Low_complexity 1 132 0 6 1492 24 32 0 0 chr13 118884577 118884608 -1399704 + AT_rich Low_complexity Low_complexity 1 31 0 6 1492 616 233 8 8 chr13 118885066 118885196 -1399116 - Lx9 LINE L1 -941 6703 6574 6 1492 1123 206 40 0 chr13 118885200 118885447 -1398865 + Lx9 LINE L1 7209 7465 -179 6 1492 486 0 0 0 chr13 118885451 118885505 -1398807 + (TG)n Simple_repeat Simple_repeat 1 54 0 6 1492 534 254 55 21 chr13 118885715 118885947 -1398365 - Lx7 LINE L1 -425 7271 7040 6 1492 694 325 39 58 chr13 118885949 118886432 -1397880 + L1_Mur3 LINE L1 4927 5400 -480 6 1492 207 152 0 0 chr13 118886474 118886520 -1397792 + T-rich Low_complexity Low_complexity 6 51 0 6 1492 1069 102 7 0 chr13 118886520 118886667 -1397645 - B1_Mus1 SINE Alu 0 148 1 6 1492 663 292 40 43 chr13 118886688 118887017 -1397295 - L1MC3 LINE L1 -998 6787 6460 6 1492 356 309 137 51 chr13 118887180 118887835 -1396477 - L1MC3 LINE L1 -1556 6229 5507 6 1492 1098 92 17 0 chr13 118887835 118888009 -1396303 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 6 1492 380 318 91 35 chr13 118888009 118888678 -1395634 - L1MC3 LINE L1 -2279 5506 4813 6 1492 300 267 62 75 chr13 118888840 118888986 -1395326 - ORR1E LTR MaLR -149 210 67 6 1492 1247 220 181 6 chr13 118889228 118889575 -1394737 - MTC LTR MaLR 0 421 14 6 1492 240 350 55 41 chr13 118889586 118889732 -1394580 - MLT1F1 LTR MaLR -5 564 417 6 1492 343 252 56 9 chr13 118890010 118890118 -1394194 + L1_Rod LINE L1 5095 5207 -640 6 1492 369 198 37 0 chr13 118890159 118890240 -1394072 - RMER19C LTR ERVK 0 902 819 6 1492 1125 187 14 104 chr13 118890231 118890518 -1393794 - RMER19C LTR ERVK -350 261 1 6 1492 336 336 85 41 chr13 118890801 118891071 -1393241 - Lx8 LINE L1 0 7473 7192 6 1492 453 340 6 25 chr13 118891131 118891291 -1393021 - RSINE1 SINE B4 -6 159 3 6 1492 1665 189 126 0 chr13 118891553 118891903 -1392409 + ORR1B1 LTR MaLR 1 394 0 6 1492 1390 354 71 60 chr13 118892914 118893028 -1391284 - Lx9 LINE L1 -13 7460 7332 6 1492 255 31 0 0 chr13 118893028 118893060 -1391252 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1492 1390 354 71 60 chr13 118893060 118893091 -1391221 - Lx9 LINE L1 -142 7331 7302 6 1492 333 0 0 0 chr13 118893091 118893128 -1391184 + (TG)n Simple_repeat Simple_repeat 2 38 0 6 1492 2956 305 58 62 chr13 118893128 118894978 -1389334 - Lx9 LINE L1 -258 7386 5459 6 1492 4343 61 7 7 chr13 118894978 118895535 -1388777 - L1_Mus1 LINE L1 0 6567 6011 6 1492 2956 255 40 130 chr13 118895535 118895644 -1388668 - Lx9 LINE L1 -389 5458 5412 6 1492 675 246 8 0 chr13 118895644 118895778 -1388534 - B1_Mur2 SINE Alu -14 135 1 6 1492 2956 255 40 130 chr13 118895778 118895908 -1388404 - Lx9 LINE L1 -436 5411 5313 6 1492 765 0 0 0 chr13 118895908 118895993 -1388319 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 6 1492 837 277 10 0 chr13 118895993 118896195 -1388117 - B3 SINE B2 -9 207 4 6 1492 2956 255 40 130 chr13 118896195 118897140 -1387172 - Lx9 LINE L1 -535 5312 4375 6 1492 297 281 93 87 chr13 118897306 118897489 -1386823 + MLT1B LTR MaLR 75 258 -132 6 1492 552 30 0 0 chr13 118897660 118897726 -1386586 + (TC)n Simple_repeat Simple_repeat 2 67 0 6 1492 651 298 10 89 chr13 118898204 118898517 -1385795 - B4A SINE B4 0 292 5 6 1492 236 371 38 9 chr13 118898941 118899047 -1385265 - Charlie24 DNA MER1_type -1651 799 691 6 1492 486 290 40 27 chr13 118900106 118900255 -1384057 + B4A SINE B4 3 153 -139 6 1492 210 37 0 0 chr13 118900298 118900325 -1383987 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 6 1492 29 28 0 0 chr13 118900518 118900554 -1383758 + AT_rich Low_complexity Low_complexity 1 36 0 6 1492 27 29 0 0 chr13 118902241 118902275 -1382037 + AT_rich Low_complexity Low_complexity 1 34 0 6 1492 183 129 0 0 chr13 118902547 118902578 -1381734 + (GA)n Simple_repeat Simple_repeat 1 31 0 6 1492 402 147 0 0 chr13 118902800 118902868 -1381444 + (A)n Simple_repeat Simple_repeat 1 68 0 6 1492 817 220 43 111 chr13 118902881 118903108 -1381204 - RMER6C LTR ERVK -25 731 526 6 1492 7277 28 0 0 chr13 118903108 118903957 -1380355 + L1Md_T LINE L1 5734 6582 0 6 1492 817 207 35 109 chr13 118903957 118904118 -1380194 - RMER6C LTR ERVK -135 555 363 6 1492 1100 131 6 0 chr13 118904118 118904286 -1380026 - Lx2A1 LINE L1 -120 6888 6720 6 1492 1261 129 186 30 chr13 118904288 118904552 -1379760 - RMER6C LTR ERVK -380 310 6 6 1492 2732 201 35 27 chr13 118904554 118905254 -1379058 - RMER6-int LTR ERVK -1 3176 2723 6 1492 524 83 20 20 chr13 118905584 118905682 -1378630 + (TTTC)n Simple_repeat Simple_repeat 2 99 0 6 1492 267 217 41 24 chr13 118906090 118906213 -1378099 + (TA)n Simple_repeat Simple_repeat 2 126 0 6 1492 1130 75 0 0 chr13 118906247 118906393 -1377919 - B1_Mm SINE Alu 0 147 2 6 1492 874 291 57 88 chr13 118907408 118907641 -1376671 + Lx8 LINE L1 6892 7124 -349 6 1492 655 304 19 5 chr13 118907641 118907846 -1376466 + B3 SINE B2 3 210 -6 6 1492 874 291 57 88 chr13 118907846 118907963 -1376349 + Lx8 LINE L1 7125 7231 -242 6 1492 21 0 0 0 chr13 118908214 118908235 -1376077 + AT_rich Low_complexity Low_complexity 1 21 0 6 1492 5078 50 0 0 chr13 118909037 118909661 -1374651 - L1Md_F2 LINE L1 0 6582 5959 6 1492 1942 206 35 191 chr13 118910211 118910254 -1374058 - RMER19C LTR ERVK -2 609 567 6 1492 265 24 23 23 chr13 118910254 118910297 -1374015 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 6 1492 1942 206 35 191 chr13 118910297 118910975 -1373337 - RMER19C LTR ERVK -45 566 1 6 1492 926 325 43 57 chr13 118910975 118911435 -1372877 - MLT1C LTR MaLR -1 466 13 6 1492 357 326 114 36 chr13 118911949 118912089 -1372223 + B3A SINE B2 48 198 0 6 1492 626 312 11 33 chr13 118912123 118912305 -1372007 + B3A SINE B2 20 197 -1 6 1492 26 30 0 0 chr13 118913191 118913224 -1371088 + AT_rich Low_complexity Low_complexity 1 33 0 6 1492 1614 253 45 15 chr13 118913224 118913621 -1370691 - MTD LTR MaLR -5 414 6 6 1492 3452 32 0 128 chr13 118913639 118914139 -1370173 - RLTR10C LTR ERVK 0 436 1 6 1492 284 273 0 0 chr13 118914453 118914519 -1369793 - MTEa LTR MaLR 0 379 314 6 1492 1545 235 32 40 chr13 118914519 118914896 -1369416 + ORR1D1 LTR MaLR 1 374 0 6 1492 236 347 88 61 chr13 118914944 118915125 -1369187 - MTEa LTR MaLR -73 286 101 6 1492 459 0 0 0 chr13 118915143 118915194 -1369118 + (TCTA)n Simple_repeat Simple_repeat 4 54 0 6 1492 419 0 20 0 chr13 118915618 118915669 -1368643 + (CAAA)n Simple_repeat Simple_repeat 2 53 0 6 1492 3712 115 2 2 chr13 118916576 118917117 -1367195 - L1Md_F2 LINE L1 0 6582 6042 6 1492 3001 157 106 43 chr13 118917226 118917811 -1366501 + RMER19B LTR ERVK 247 868 -34 6 1492 441 269 45 34 chr13 118917814 118917991 -1366321 - Lx9 LINE L1 -619 6854 6676 6 1492 29 0 0 0 chr13 118918211 118918240 -1366072 + AT_rich Low_complexity Low_complexity 1 29 0 6 1492 420 20 0 0 chr13 118918974 118919023 -1365289 + (TA)n Simple_repeat Simple_repeat 1 49 0 6 1492 633 214 27 7 chr13 118919515 118919661 -1364651 - B1_Mur1 SINE Alu 0 149 1 6 1492 1114 318 32 28 chr13 118920070 118920551 -1363761 - Lx9 LINE L1 -942 6702 6075 6 1492 317 232 14 0 chr13 118920548 118920617 -1363695 + Lx9 LINE L1 6946 7015 -629 6 1492 2041 201 154 33 chr13 118920637 118921156 -1363156 - RMER19B LTR ERVK -13 889 308 6 1492 963 297 52 38 chr13 118921177 118921677 -1362635 + Lx9 LINE L1 7012 7518 -126 6 1492 22 35 0 0 chr13 118922385 118922414 -1361898 + AT_rich Low_complexity Low_complexity 1 29 0 6 1492 25 0 0 0 chr13 118922957 118922982 -1361330 + AT_rich Low_complexity Low_complexity 1 25 0 6 1492 25 31 0 0 chr13 118923277 118923309 -1361003 + AT_rich Low_complexity Low_complexity 1 32 0 6 1492 183 287 20 69 chr13 118923505 118923606 -1360706 - MER5A DNA MER1_type -90 99 4 6 1492 1508 48 0 16 chr13 118923872 118924061 -1360251 - B2_Mm1a SINE B2 -6 187 2 6 1492 555 208 51 13 chr13 118924223 118924379 -1359933 - RNERVK23-int LTR ERVK -7675 542 381 6 1492 3798 68 12 4 chr13 118924534 118924911 -1359401 + L1_Mus2 LINE L1 6050 6429 -137 6 1492 677 12 24 0 chr13 118924911 118924996 -1359316 + (TTATA)n Simple_repeat Simple_repeat 5 91 0 6 1492 3798 68 12 4 chr13 118924996 118925124 -1359188 + L1_Mus2 LINE L1 6430 6559 -7 6 1492 1857 194 33 6 chr13 118925127 118925785 -1358527 - L1_Mur1 LINE L1 -2352 1560 885 7 1492 525 265 102 11 chr13 118925941 118926128 -1358184 + Lx8 LINE L1 6212 6415 -1058 7 1492 2888 205 105 63 chr13 118926541 118927407 -1356905 + RLTR13D6 LTR ERVK 1 902 0 7 1492 32 26 0 0 chr13 118929652 118929691 -1354621 + AT_rich Low_complexity Low_complexity 1 39 0 7 1492 225 340 11 0 chr13 118930307 118930401 -1353911 + Lx9 LINE L1 7208 7302 -342 7 1492 748 268 79 70 chr13 118930576 118931046 -1353266 + L1MA9 LINE L1 5259 5732 -580 7 1492 22 41 0 39 chr13 118931117 118931148 -1353164 + AT_rich Low_complexity Low_complexity 1 30 0 7 1492 1354 35 41 6 chr13 118931148 118931319 -1352993 + B2_Mm2 SINE B2 1 177 -18 7 1492 22 41 0 39 chr13 118931319 118931338 -1352974 + AT_rich Low_complexity Low_complexity 1 19 0 7 1492 382 291 116 0 chr13 118931548 118931737 -1352575 + L1MA9 LINE L1 6064 6274 -38 7 1492 21 0 0 0 chr13 118932986 118933007 -1351305 + AT_rich Low_complexity Low_complexity 1 21 0 7 1492 318 254 29 49 chr13 118933295 118933567 -1350745 + Lx9 LINE L1 7330 7629 -15 7 1492 459 0 0 0 chr13 118934472 118934523 -1349789 + (TA)n Simple_repeat Simple_repeat 2 52 0 7 1492 1073 14 28 0 chr13 118934535 118934678 -1349634 + (TAGA)n Simple_repeat Simple_repeat 4 150 0 7 1492 199 303 79 0 chr13 118936852 118936941 -1347371 + MER5A DNA MER1_type 48 143 -46 7 1492 444 216 0 0 chr13 118937438 118937540 -1346772 + (TA)n Simple_repeat Simple_repeat 1 102 0 7 1492 21 0 0 0 chr13 118937969 118937990 -1346322 + AT_rich Low_complexity Low_complexity 1 21 0 7 1492 3011 78 56 30 chr13 118938020 118938483 -1345829 + IAPLTR2_Mm LTR ERVK 1 475 0 7 1492 305 110 95 14 chr13 118938485 118938559 -1345753 + IAPEz-int LTR ERVK 3 82 -1905 7 1492 4108 88 33 37 chr13 118938566 118939331 -1344981 + IAPEz-int LTR ERVK 10 662 -5819 7 1492 2199 72 0 0 chr13 118939331 118939609 -1344703 + IAPEz-int LTR ERVK 1359 1636 -4845 7 1492 5618 69 12 8 chr13 118939608 118940349 -1343963 + IAPEz-int LTR ERVK 5736 6479 -2 7 1492 2439 91 71 25 chr13 118940366 118940759 -1343553 - IAPLTR2a LTR ERVK 0 411 1 7 1492 999 74 15 0 chr13 118941633 118941768 -1342544 - B1_Mm SINE Alu 0 147 11 7 1492 661 298 171 17 chr13 118941895 118942187 -1342125 - MTEb LTR MaLR -42 337 1 7 1492 33 85 0 0 chr13 118942429 118942511 -1341801 + AT_rich Low_complexity Low_complexity 1 82 0 7 1492 542 247 107 34 chr13 118942806 118943011 -1341301 + ID_B1 SINE B4 3 222 -2 7 1492 257 353 86 18 chr13 118943693 118943915 -1340397 - Lx8 LINE L1 -250 7223 6987 7 1492 1449 258 41 0 chr13 118945866 118946235 -1338077 - Lx6 LINE L1 -21 7439 7056 7 1492 403 279 98 8 chr13 118946466 118946502 -1337810 - ID_B1 SINE B4 0 224 91 7 1492 421 287 0 0 chr13 118946502 118946589 -1337723 - PB1D10 SINE Alu -21 96 10 7 1492 34752 65 5 7 chr13 118946668 118948774 -1335538 - L1Md_F2 LINE L1 -3 6579 4487 7 1492 3240 33 10 5 chr13 118948774 118949168 -1335144 - MTA_Mm LTR MaLR 0 396 1 7 1492 7929 77 11 2 chr13 118949168 118950256 -1334056 - MTA_Mm-int LTR MaLR 0 1098 1 7 1492 3259 33 8 5 chr13 118950256 118950649 -1333663 - MTA_Mm LTR MaLR 0 396 3 7 1492 34752 75 3 4 chr13 118950649 118954364 -1329948 - L1Md_F2 LINE L1 -1397 4486 763 7 1492 23 0 0 0 chr13 118955258 118955281 -1329031 + AT_rich Low_complexity Low_complexity 1 23 0 7 1492 658 323 5 15 chr13 118955402 118955597 -1328715 + B3 SINE B2 24 216 0 7 1492 1345 170 183 1 chr13 118955660 118955945 -1328367 - ORR1B1 LTR MaLR -30 364 1 7 1492 3585 184 40 86 chr13 118955945 118956771 -1327541 - ORR1B1-int LTR MaLR 0 1509 722 7 1492 351 167 17 0 chr13 118956734 118956794 -1327518 - B1_Mur3 SINE Alu -36 113 53 7 1492 784 101 0 56 chr13 118956782 118956908 -1327404 - ORR1B1-int LTR MaLR -1389 120 2 7 1492 1610 199 133 3 chr13 118956921 118957268 -1327044 - ORR1B1 LTR MaLR 0 394 3 7 1492 377 328 118 16 chr13 118957335 118957462 -1326850 - RSINE1 SINE B4 -9 156 17 7 1492 784 290 125 0 chr13 118957581 118957974 -1326338 + L1MA8 LINE L1 5461 5902 -389 7 1492 911 259 81 37 chr13 118958180 118958570 -1325742 - RMER16 LTR ERVK 0 533 1 7 1492 23 0 0 0 chr13 118958662 118958685 -1325627 + AT_rich Low_complexity Low_complexity 1 23 0 7 1492 333 0 0 0 chr13 118960303 118960340 -1323972 + (CA)n Simple_repeat Simple_repeat 2 38 0 7 1492 2301 167 31 13 chr13 118960352 118961115 -1323197 + L1_Mur2 LINE L1 945 1730 -4147 7 1492 961 77 21 7 chr13 118961114 118961258 -1323054 - L1_Mur2 LINE L1 -2475 3402 3257 7 1492 7572 123 91 4 chr13 118961256 118962525 -1321787 + L1_Mur2 LINE L1 3395 4774 -1103 7 1492 497 170 0 0 chr13 118962565 118962659 -1321653 + L1_Mur2 LINE L1 4099 4192 -1685 7 1492 269 250 33 43 chr13 118963224 118963316 -1320996 - MLT1A1 LTR MaLR -2 406 316 7 1492 1462 286 113 25 chr13 118963561 118963843 -1320469 + Lx8 LINE L1 6210 6541 -932 7 1492 3072 12 3 0 chr13 118963843 118964188 -1320124 - ORR1A0 LTR MaLR 0 346 1 7 1492 1462 286 113 25 chr13 118964188 118964460 -1319852 + Lx8 LINE L1 6542 6813 -660 7 1492 189 74 0 0 chr13 118964498 118964525 -1319787 + (CA)n Simple_repeat Simple_repeat 2 28 0 7 1492 1904 238 69 128 chr13 118964558 118965301 -1319011 - RMER1B Other Other -145 921 223 7 1492 2017 172 65 8 chr13 118965301 118965671 -1318641 + RLTR9D LTR ERVK 1 391 -12 7 1492 735 294 11 0 chr13 118965678 118965858 -1318454 - RMER1B Other Other -838 228 47 7 1492 265 304 0 0 chr13 118966263 118966355 -1317957 - RMER1B Other Other -912 154 63 7 1492 270 0 0 0 chr13 118966470 118966500 -1317812 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 7 1492 4265 225 60 64 chr13 118966547 118967679 -1316633 + RLTR21 LTR ERVK 1 1127 -445 7 1492 525 105 0 0 chr13 118967679 118967774 -1316538 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 7 1492 441 0 0 0 chr13 118967777 118967826 -1316486 + (TG)n Simple_repeat Simple_repeat 1 49 0 7 1492 4265 243 54 112 chr13 118967826 118967935 -1316377 + RLTR21 LTR ERVK 1128 1315 -89 7 1492 450 295 68 42 chr13 118967959 118968150 -1316162 + Lx8 LINE L1 6963 7158 -315 7 1492 11857 141 38 2 chr13 118968149 118968927 -1315385 + Lx LINE L1 3844 4627 -1256 7 1492 192 77 0 0 chr13 118968927 118968953 -1315359 + (CAA)n Simple_repeat Simple_repeat 2 27 0 7 1492 11857 118 27 5 chr13 118968953 118970892 -1313420 + Lx LINE L1 4628 6642 -12 7 1492 259 355 60 40 chr13 118970964 118971216 -1313096 + Lx8 LINE L1 7216 7472 -1 7 1492 34 24 0 0 chr13 118971396 118971437 -1312875 + AT_rich Low_complexity Low_complexity 1 41 0 7 1492 1143 293 21 36 chr13 118972399 118972788 -1311524 - Lx9 LINE L1 -453 7191 6809 7 1492 21 0 0 0 chr13 118972833 118972854 -1311458 + AT_rich Low_complexity Low_complexity 1 21 0 7 1492 282 292 45 58 chr13 118972880 118973036 -1311276 + Lx9 LINE L1 6318 6471 -1173 7 1492 314 306 36 9 chr13 118973068 118973180 -1311132 - MLT1F1 LTR MaLR -452 117 3 7 1492 372 318 163 40 chr13 118973256 118974113 -1310199 - L1MC4a LINE L1 -657 7225 6263 7 1492 480 249 232 35 chr13 118974450 118974795 -1309517 + Charlie7 DNA MER1_type 1736 2148 -464 7 1492 709 328 0 69 chr13 118975055 118975258 -1309054 + B3A SINE B2 1 189 -9 7 1492 396 315 149 0 chr13 118976286 118976467 -1307845 - L1MD3 LINE L1 -376 7619 7412 7 1492 232 317 2 143 chr13 118976467 118976579 -1307733 - MLT1F2 LTR MaLR -420 140 42 7 1492 325 293 59 22 chr13 118978102 118978238 -1306074 + B1F2 SINE Alu 6 146 -3 7 1492 1426 80 0 0 chr13 118979055 118979242 -1305070 - L1_Mus1 LINE L1 0 6567 6381 7 1492 826 235 92 0 chr13 118979242 118979595 -1304717 - Lx9 LINE L1 -25 7619 7216 7 1492 972 206 13 40 chr13 118980048 118980276 -1304036 - URR1B DNA MER1_type -3 222 1 7 1492 320 354 268 29 chr13 118980683 118980939 -1303373 + LTR33B LTR ERVL 9 324 -179 7 1492 1524 11 0 0 chr13 118980939 118981113 -1303199 + (TC)n Simple_repeat Simple_repeat 1 174 0 7 1492 320 370 102 39 chr13 118981113 118981229 -1303083 + LTR33B LTR ERVL 325 450 -53 7 1492 944 114 7 0 chr13 118981909 118982058 -1302254 + (TTCC)n Simple_repeat Simple_repeat 3 152 0 7 1492 594 49 0 0 chr13 118982058 118982140 -1302172 - L1_Mus1 LINE L1 -5 6562 6481 7 1492 2408 70 0 0 chr13 118982140 118982440 -1301872 + L1_Mus1 LINE L1 6067 6366 -201 7 1492 810 195 159 0 chr13 118983669 118983864 -1300448 + URR1A DNA MER1_type 1 226 0 7 1492 2646 129 5 5 chr13 118983891 118984313 -1299999 - Lx LINE L1 -2 6652 6231 7 1492 8169 107 18 7 chr13 118985117 118986348 -1297964 + Lx2 LINE L1 5752 6996 -1 7 1492 3830 66 20 4 chr13 118986358 118986857 -1297455 + L1Md_F2 LINE L1 6062 6568 -14 7 1492 22 56 0 0 chr13 118987905 118987941 -1296371 + AT_rich Low_complexity Low_complexity 1 36 0 7 1492 973 277 147 18 chr13 118988126 118988453 -1295859 + ORR1D1 LTR MaLR 1 369 -5 7 1492 238 208 12 83 chr13 118988476 118988560 -1295752 + ORR1D1-int LTR MaLR 587 664 -1299 7 1492 1520 188 79 15 chr13 118988588 118988978 -1295334 + MT2A LTR ERVL 1 460 -73 7 1492 468 0 0 0 chr13 118988978 118989030 -1295282 + (CA)n Simple_repeat Simple_repeat 1 52 0 7 1492 694 243 23 50 chr13 118989030 118989044 -1295268 + MT2A LTR ERVL 461 477 -56 7 1492 384 22 0 0 chr13 118989044 118989089 -1295223 + (TA)n Simple_repeat Simple_repeat 1 45 0 7 1492 694 243 23 50 chr13 118989089 118989147 -1295165 + MT2A LTR ERVL 478 533 0 7 1492 404 228 23 30 chr13 118989207 118989338 -1294974 - Lx7 LINE L1 0 7696 7567 7 1492 248 238 0 16 chr13 118989575 118989639 -1294673 + CT-rich Low_complexity Low_complexity 1 63 0 7 1492 858 308 133 20 chr13 118989682 118990073 -1294239 - Lx8 LINE L1 -167 7306 6872 7 1492 289 259 41 74 chr13 118990269 118990390 -1293922 - MLT1B LTR MaLR -268 122 6 7 1492 689 297 149 60 chr13 118991425 118991729 -1292583 + MTD LTR MaLR 18 351 -68 7 1492 4136 72 0 6 chr13 118991729 118992270 -1292042 + L1Md_F2 LINE L1 6034 6571 -11 7 1492 689 297 149 60 chr13 118992270 118992334 -1291978 + MTD LTR MaLR 352 418 -1 7 1492 501 92 0 0 chr13 118992607 118992683 -1291629 + (GGGAGA)n Simple_repeat Simple_repeat 4 79 0 7 1492 1475 229 80 11 chr13 118992703 118993065 -1291247 - MTB_Mm LTR MaLR -13 394 8 7 1492 183 129 0 0 chr13 118993121 118993152 -1291160 + (TA)n Simple_repeat Simple_repeat 1 31 0 7 1492 297 364 51 11 chr13 118993249 118993424 -1290888 - L2 LINE L2 -1224 2195 2014 7 1492 573 265 77 53 chr13 118993741 118994040 -1290272 - Lx9 LINE L1 -348 7296 6991 7 1492 783 114 23 11 chr13 118994040 118994217 -1290095 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 7 1492 392 222 9 18 chr13 118994234 118994344 -1289968 + Lx9 LINE L1 7536 7644 0 7 1492 216 280 11 11 chr13 118994863 118994957 -1289355 + (TTAAA)n Simple_repeat Simple_repeat 3 96 0 7 1492 21 0 0 0 chr13 118995392 118995413 -1288899 + AT_rich Low_complexity Low_complexity 1 21 0 7 1492 315 0 0 0 chr13 118995663 118995698 -1288614 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 7 1492 24 53 0 0 chr13 118996202 118996240 -1288072 + AT_rich Low_complexity Low_complexity 1 38 0 7 1492 2505 298 17 27 chr13 118996327 118996661 -1287651 + Lx9 LINE L1 6344 6684 -960 7 1492 1433 221 116 13 chr13 118996661 118997041 -1287271 + MTD LTR MaLR 1 419 0 7 1492 2505 298 17 27 chr13 118997041 118997544 -1286768 + Lx9 LINE L1 6685 7172 -472 7 1492 633 186 17 0 chr13 118999878 118999996 -1284316 - URR1B DNA MER1_type 0 225 106 7 1492 381 217 85 21 chr13 119000001 119000082 -1284230 - URR1B DNA MER1_type -125 100 13 1 1492 747 62 80 0 chr13 119000082 119000195 -1284117 - L1_Mus2 LINE L1 0 6566 6445 2 1492 381 217 85 21 chr13 119000195 119000207 -1284105 - URR1B DNA MER1_type -213 12 1 1 1492 381 330 152 25 chr13 119000653 119000976 -1283336 - MER20B DNA MER1_type -15 768 405 3 1492 394 336 7 0 chr13 119001441 119001581 -1282731 + B1_Mur1 SINE Alu 1 141 -8 4 1492 993 158 0 0 chr13 119001600 119001777 -1282535 + GA-rich Low_complexity Low_complexity 2 178 0 5 1492 2056 189 38 0 chr13 119001954 119002324 -1281988 - MTC LTR MaLR -33 388 5 6 1492 450 301 158 14 chr13 119002352 119002838 -1281474 + L1MB7 LINE L1 2548 3103 -3043 7 1492 447 296 157 47 chr13 119003056 119003928 -1280384 + L1MB7 LINE L1 3412 4379 -1767 7 1492 714 118 0 35 chr13 119003929 119004070 -1280242 - L1Md_F3 LINE L1 0 6584 6449 8 1492 33573 78 6 4 chr13 119004086 119009490 -1274822 + L1Md_F3 LINE L1 174 5585 -298 9 1492 8136 44 1 0 chr13 119009491 119010473 -1273839 + L1Md_F3 LINE L1 5587 6569 -15 9 1492 524 279 23 15 chr13 119010532 119010663 -1273649 + RSINE1 SINE B4 3 134 -31 1 1492 263 311 126 30 chr13 119010742 119010941 -1273371 + L1MB7 LINE L1 4488 4705 -1441 7 1492 27 0 0 0 chr13 119010952 119010979 -1273333 + AT_rich Low_complexity Low_complexity 1 27 0 1 1492 2117 121 58 138 chr13 119011060 119011576 -1272736 + IAPLTR2_Mm LTR ERVK 1 475 0 1 1492 2168 109 32 0 chr13 119011700 119012012 -1272300 + ORR1A2 LTR MaLR 4 325 -2 1 1492 322 284 101 91 chr13 119012052 119012261 -1272051 + MLT1A1 LTR MaLR 3 213 -195 1 1492 244 298 0 50 chr13 119012306 119012405 -1271907 + MLT1A1 LTR MaLR 313 406 -2 1 1492 772 289 129 3 chr13 119012563 119012903 -1271409 + Lx9 LINE L1 7242 7624 -20 1 186 4946 148 7 12 chr13 119012920 119013737 -1270575 - Lx2B LINE L1 -4 6996 6184 1 1493 28 79 0 0 chr13 119013811 119013874 -1270438 + AT_rich Low_complexity Low_complexity 1 63 0 1 1493 204 158 0 0 chr13 119013880 119013918 -1270394 + (CA)n Simple_repeat Simple_repeat 2 39 0 1 1493 320 380 19 0 chr13 119013930 119014038 -1270274 + ID_B1 SINE B4 79 188 -36 1 1493 528 16 0 0 chr13 119014071 119014132 -1270180 + (GA)n Simple_repeat Simple_repeat 2 62 0 2 1493 602 13 13 0 chr13 119014297 119014372 -1269940 + (CA)n Simple_repeat Simple_repeat 1 76 0 2 1493 361 305 77 54 chr13 119014394 119014654 -1269658 + L1MB7 LINE L1 5502 5767 -411 7 1493 653 284 118 61 chr13 119014742 119015105 -1269207 + L1MB7 LINE L1 5799 6182 -2 7 1493 296 140 0 6 chr13 119015301 119015363 -1268949 + B2_Mm2 SINE B2 1 60 -156 2 1493 34 24 0 0 chr13 119015536 119015577 -1268735 + AT_rich Low_complexity Low_complexity 1 41 0 2 1493 1251 107 17 11 chr13 119016874 119017054 -1267258 + B2_Mm2 SINE B2 1 181 -14 2 1493 234 280 91 27 chr13 119017268 119017378 -1266934 - Tigger5 DNA MER2_type -1273 1133 1017 2 1493 740 284 118 4 chr13 119017782 119018054 -1266258 + MER57F LTR ERV1 39 341 -95 2 1493 30 27 0 0 chr13 119018992 119019029 -1265283 + AT_rich Low_complexity Low_complexity 1 37 0 2 1493 527 353 60 45 chr13 119019075 119019389 -1264923 + MLT1A LTR MaLR 28 346 -28 2 1493 1092 345 109 45 chr13 119020310 119020370 -1263942 + MER21B LTR ERV1 1 62 -801 2 1493 423 0 0 0 chr13 119020370 119020417 -1263895 + (CA)n Simple_repeat Simple_repeat 2 48 0 3 1493 234 0 0 0 chr13 119020417 119020442 -1263870 + (TA)n Simple_repeat Simple_repeat 2 27 0 3 1493 1092 345 109 45 chr13 119020442 119020544 -1263768 + MER21B LTR ERV1 63 186 -677 2 1493 3920 138 75 26 chr13 119020544 119021265 -1263047 + RMER6A LTR ERVK 1 756 0 3 1493 1092 345 109 45 chr13 119021265 119021762 -1262550 + MER21B LTR ERV1 187 703 -160 2 1493 378 107 0 0 chr13 119022774 119022830 -1261482 + (GA)n Simple_repeat Simple_repeat 2 57 0 3 1493 317 347 58 35 chr13 119022846 119023019 -1261293 + HAL1-3A_ME LINE L1 2284 2460 -398 3 1493 206 200 0 0 chr13 119023591 119023626 -1260686 + (TGG)n Simple_repeat Simple_repeat 2 36 0 3 1493 300 345 59 12 chr13 119023714 119023884 -1260428 + L2a LINE L2 3249 3426 0 3 1493 534 68 40 0 chr13 119024068 119024142 -1260170 + ORR1A3 LTR MaLR 246 322 -4 3 1493 368 165 11 0 chr13 119024194 119024285 -1260027 + CT-rich Low_complexity Low_complexity 1 92 0 3 1493 660 256 95 88 chr13 119024311 119024585 -1259727 - B4 SINE B4 -16 276 1 3 1493 439 290 96 83 chr13 119025388 119025606 -1258706 + RMER2 LTR ERV1 329 549 -18 4 1493 840 225 31 16 chr13 119026229 119026423 -1257889 - B3 SINE B2 -19 197 1 4 1493 281 26 26 0 chr13 119027381 119027419 -1256893 + (TA)n Simple_repeat Simple_repeat 2 40 0 4 1493 22 0 0 0 chr13 119027423 119027445 -1256867 + AT_rich Low_complexity Low_complexity 1 22 0 4 1493 6619 40 1 5 chr13 119027447 119028252 -1256060 - L1Md_T LINE L1 -2 6580 5779 4 1493 21 36 0 0 chr13 119028472 119028500 -1255812 + AT_rich Low_complexity Low_complexity 1 28 0 4 1493 198 91 0 0 chr13 119030187 119030220 -1254092 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 4 1493 21 0 0 0 chr13 119030728 119030749 -1253563 + AT_rich Low_complexity Low_complexity 1 21 0 4 1493 23 33 0 0 chr13 119033062 119033092 -1251220 + AT_rich Low_complexity Low_complexity 1 30 0 4 1493 227 167 83 0 chr13 119033633 119033693 -1250619 - Charlie13a DNA Charlie -1072 442 378 4 1493 24 0 0 0 chr13 119033927 119033951 -1250361 + AT_rich Low_complexity Low_complexity 1 24 0 5 1493 334 147 53 0 chr13 119033991 119034066 -1250246 + (CATA)n Simple_repeat Simple_repeat 4 82 0 5 1493 1936 162 46 19 chr13 119035438 119035810 -1248502 - RLTR14 LTR ERV1 0 382 1 5 1493 495 280 89 47 chr13 119036265 119036456 -1247856 - B4 SINE B4 -80 212 14 5 1493 763 219 0 0 chr13 119037148 119037285 -1247027 - B1_Mus1 SINE Alu -8 140 4 5 1493 3780 110 39 3 chr13 119038080 119038646 -1245666 + Lx2 LINE L1 6406 6991 -6 5 1493 411 100 0 0 chr13 119039074 119039144 -1245168 + (TC)n Simple_repeat Simple_repeat 2 71 0 5 1493 338 0 0 23 chr13 119039156 119039199 -1245113 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 5 1493 22 56 0 0 chr13 119039584 119039620 -1244692 + AT_rich Low_complexity Low_complexity 1 36 0 5 1493 6069 60 1 0 chr13 119039877 119040641 -1243671 - L1Md_T LINE L1 -1 6581 5817 5 1493 821 261 46 46 chr13 119041392 119041718 -1242594 - RMER17C LTR ERVK 0 410 85 6 1493 778 181 94 22 chr13 119041739 119042005 -1242307 - RMER17C LTR ERVK -519 439 1 6 1493 1785 184 22 82 chr13 119042404 119042806 -1241506 - ORR1C1 LTR MaLR 0 378 1 6 1493 294 385 47 60 chr13 119043203 119043435 -1240877 - L2 LINE L2 -657 2762 2534 6 1493 21 0 0 0 chr13 119043879 119043900 -1240412 + AT_rich Low_complexity Low_complexity 1 21 0 6 1493 429 209 28 9 chr13 119044538 119044644 -1239668 + Lx9 LINE L1 7382 7489 -155 6 1493 252 122 0 0 chr13 119044645 119044686 -1239626 + (CA)n Simple_repeat Simple_repeat 2 42 0 6 1493 268 216 114 0 chr13 119044699 119044787 -1239525 + Lx9 LINE L1 7545 7642 -2 6 1493 260 220 0 0 chr13 119044876 119044935 -1239377 + T-rich Low_complexity Low_complexity 1 59 0 6 1493 978 89 0 56 chr13 119044950 119045092 -1239220 - B1_Mus1 SINE Alu -12 136 3 6 1493 589 323 102 99 chr13 119045333 119045746 -1238566 + MLT2D LTR ERVL 1 414 0 6 1493 327 291 29 22 chr13 119045753 119045890 -1238422 + MLT1C-int LTR MaLR 21 158 -1213 7 1493 612 321 93 62 chr13 119045878 119046263 -1238049 + MLT1C-int LTR MaLR 313 709 -662 7 1493 1491 284 98 33 chr13 119046490 119047121 -1237191 + Lx9 LINE L1 6157 6828 -816 7 1493 248 250 71 12 chr13 119047284 119047369 -1236943 + MLT1C LTR MaLR 15 104 -286 7 1493 312 70 0 0 chr13 119047424 119047467 -1236845 + (CA)n Simple_repeat Simple_repeat 2 44 0 7 1493 441 0 0 0 chr13 119047469 119047518 -1236794 + (GA)n Simple_repeat Simple_repeat 1 49 0 7 1493 335 325 69 69 chr13 119047571 119047746 -1236566 + MLT1C LTR MaLR 293 467 0 7 1493 1419 212 60 10 chr13 119048573 119048887 -1235425 + ORR1C1 LTR MaLR 1 330 -48 7 1493 21 0 0 0 chr13 119049115 119049136 -1235176 + AT_rich Low_complexity Low_complexity 1 21 0 7 1493 12399 7 0 0 chr13 119049161 119050561 -1233751 + L1Md_A LINE L1 4187 5586 -297 7 1493 8970 5 0 0 chr13 119050561 119051555 -1232757 + L1Md_A LINE L1 5587 6580 -2 7 1493 21 0 0 0 chr13 119051588 119051609 -1232703 + AT_rich Low_complexity Low_complexity 1 21 0 7 1493 844 199 166 75 chr13 119051956 119052145 -1232167 + RMER17C LTR ERVK 4 219 -191 7 1493 752 57 9 0 chr13 119052145 119052251 -1232061 + (TC)n Simple_repeat Simple_repeat 2 108 0 7 1493 844 199 166 75 chr13 119052251 119052393 -1231919 + RMER17C LTR ERVK 220 364 -46 7 1493 714 24 0 0 chr13 119052687 119052771 -1231541 + (TG)n Simple_repeat Simple_repeat 1 84 0 8 1493 1156 71 0 0 chr13 119053855 119053996 -1230316 + B1_Mus2 SINE Alu 1 141 -6 8 1493 180 0 0 0 chr13 119053997 119054017 -1230295 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 8 1493 25 51 0 0 chr13 119054409 119054448 -1229864 + AT_rich Low_complexity Low_complexity 1 39 0 8 1493 2159 110 91 27 chr13 119054535 119054909 -1229403 - RLTR9E LTR ERVK 0 409 12 8 1493 198 0 0 0 chr13 119054909 119054931 -1229381 + (TGGGGG)n Simple_repeat Simple_repeat 2 23 0 8 1493 195 100 0 0 chr13 119054948 119054978 -1229334 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 8 1493 1541 211 24 94 chr13 119055814 119056227 -1228085 - ORR1C2 LTR MaLR 0 384 1 8 1493 204 361 48 40 chr13 119057295 119057419 -1226893 + MIRb SINE MIR 38 162 -106 8 1493 241 189 0 19 chr13 119057525 119057579 -1226733 + A-rich Low_complexity Low_complexity 2 54 0 8 1493 643 244 0 8 chr13 119057682 119057806 -1226506 + B3 SINE B2 1 123 -93 9 1493 2370 131 55 49 chr13 119057816 119058288 -1226024 - IAPLTR2_Mm LTR ERVK 0 475 1 9 1493 233 268 0 0 chr13 119058308 119058364 -1225948 + B3 SINE B2 154 209 -7 9 1493 256 319 14 0 chr13 119058900 119058972 -1225340 + MTE2b LTR MaLR 290 362 -17 9 1493 25 0 0 0 chr13 119059047 119059072 -1225240 + AT_rich Low_complexity Low_complexity 1 25 0 9 1493 692 190 35 7 chr13 119059250 119059393 -1224919 + B1_Mus1 SINE Alu 2 148 0 9 1493 895 213 84 28 chr13 119059631 119059844 -1224468 + URR1B DNA MER1_type 1 225 0 9 1493 209 0 0 88 chr13 119060815 119060849 -1223463 + (CAAAA)n Simple_repeat Simple_repeat 3 33 0 9 1493 186 71 0 0 chr13 119060881 119060909 -1223403 + (TC)n Simple_repeat Simple_repeat 2 29 0 9 1493 36 23 0 0 chr13 119062249 119062292 -1222020 + AT_rich Low_complexity Low_complexity 1 43 0 9 1493 1401 201 102 13 chr13 119062453 119062824 -1221488 - RMER16 LTR ERVK 0 533 1 9 1493 1783 133 6 44 chr13 119062824 119063138 -1221174 + ORR1A4 LTR MaLR 28 329 0 1 1493 856 229 43 14 chr13 119063403 119063611 -1220701 - B3 SINE B2 0 216 3 1 1493 1241 262 16 31 chr13 119063977 119064272 -1220040 + B4 SINE B4 5 292 0 1 1493 270 0 0 0 chr13 119064294 119064324 -1219988 + (TC)n Simple_repeat Simple_repeat 1 30 0 1 1493 360 0 0 0 chr13 119064324 119064363 -1219949 + (CA)n Simple_repeat Simple_repeat 1 40 0 1 1493 1269 169 133 69 chr13 119064379 119064755 -1219557 + RMER17C LTR ERVK 11 410 0 1 1493 675 289 37 91 chr13 119064845 119065386 -1218926 + L1M3 LINE L1 4028 4539 -1601 1 1493 216 359 27 54 chr13 119065634 119065746 -1218566 + L2c LINE L2 3108 3216 -171 1 1493 23 33 0 0 chr13 119066641 119066671 -1217641 + AT_rich Low_complexity Low_complexity 1 30 0 1 1493 21 0 0 0 chr13 119067014 119067035 -1217277 + AT_rich Low_complexity Low_complexity 1 21 0 1 1493 2085 184 80 23 chr13 119067365 119067843 -1216469 + RLTR16 LTR ERVK 1 505 0 1 1493 575 278 33 38 chr13 119068109 119068322 -1215990 - B3 SINE B2 0 216 5 1 1493 278 206 116 66 chr13 119069073 119069271 -1215041 + L1M3 LINE L1 5327 5540 -631 1 1493 916 279 91 18 chr13 119069326 119069768 -1214544 + L1MB8 LINE L1 5695 6168 -10 1 1493 22 0 0 0 chr13 119070718 119070740 -1213572 + AT_rich Low_complexity Low_complexity 1 22 0 1 1493 215 301 106 24 chr13 119071238 119071323 -1212989 + B1F SINE Alu 10 101 -48 1 1493 227 152 22 0 chr13 119071699 119071745 -1212567 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 1 1493 1452 70 0 5 chr13 119071908 119072096 -1212216 - B2_Mm2 SINE B2 -8 187 1 1 1493 315 373 79 11 chr13 119072510 119072814 -1211498 - MLT1F2 LTR MaLR -222 458 26 1 1493 319 335 50 66 chr13 119073105 119073424 -1210888 + LTR40c LTR ERVL 172 462 0 1 1493 24 0 0 0 chr13 119073651 119073675 -1210637 + AT_rich Low_complexity Low_complexity 1 24 0 1 1493 229 290 28 18 chr13 119074335 119074444 -1209868 + (CATA)n Simple_repeat Simple_repeat 1 110 0 1 1493 276 343 27 41 chr13 119074612 119074758 -1209554 + RSINE1 SINE B4 3 146 -19 1 1493 27 0 0 0 chr13 119074758 119074785 -1209527 + AT_rich Low_complexity Low_complexity 1 27 0 1 1493 1534 116 50 0 chr13 119074830 119075071 -1209241 - Lx3C LINE L1 -7 6969 6717 1 1493 200 217 0 42 chr13 119075519 119075567 -1208745 + CT-rich Low_complexity Low_complexity 3 48 0 1 1493 26 50 0 0 chr13 119077660 119077700 -1206612 + AT_rich Low_complexity Low_complexity 1 40 0 1 1493 4591 177 42 29 chr13 119077700 119078673 -1205639 - Lx3C LINE L1 -2 6974 5989 1 1493 29 0 0 0 chr13 119078711 119078740 -1205572 + AT_rich Low_complexity Low_complexity 1 29 0 1 1493 347 197 44 66 chr13 119078740 119078876 -1205436 - Lx9 LINE L1 -1 7643 7511 1 1493 1732 199 142 2 chr13 119078875 119079338 -1204974 - Lx9 LINE L1 -1 7643 7116 1 1493 2500 263 80 72 chr13 119079385 119080641 -1203671 - Lx9 LINE L1 -15 7629 6364 1 1493 26 50 0 0 chr13 119080780 119080820 -1203492 + AT_rich Low_complexity Low_complexity 1 40 0 1 1493 21 0 0 0 chr13 119081372 119081393 -1202919 + AT_rich Low_complexity Low_complexity 1 21 0 1 1493 2573 191 11 44 chr13 119082159 119082702 -1201610 - RLTR11A2 LTR ERVK 0 527 3 1 1493 479 45 15 0 chr13 119082868 119082934 -1201378 + (TA)n Simple_repeat Simple_repeat 2 68 0 1 1493 33 0 0 0 chr13 119083370 119083403 -1200909 + AT_rich Low_complexity Low_complexity 1 33 0 1 1493 2845 104 0 2 chr13 119083604 119084009 -1200303 - L1_Mus4 LINE L1 -13 6623 6220 1 1493 222 231 0 0 chr13 119085101 119085153 -1199159 + A-rich Low_complexity Low_complexity 1 52 0 1 1493 23 0 0 0 chr13 119086629 119086652 -1197660 + AT_rich Low_complexity Low_complexity 1 23 0 1 1493 22 80 0 0 chr13 119086673 119086723 -1197589 + AT_rich Low_complexity Low_complexity 1 50 0 1 1493 852 37 0 0 chr13 119086961 119087069 -1197243 + (TG)n Simple_repeat Simple_repeat 2 109 0 1 1493 1734 148 81 10 chr13 119087137 119087444 -1196868 + ORR1A4 LTR MaLR 1 329 0 1 1493 714 102 0 0 chr13 119087444 119087552 -1196760 + ORR1A4-int LTR MaLR 1 108 -1855 1 1493 509 344 99 28 chr13 119087552 119087836 -1196476 - L1MC4 LINE L1 -954 7088 6785 1 1493 7680 173 88 65 chr13 119087994 119089816 -1194496 + ORR1A4-int LTR MaLR 100 1963 0 1 1493 1680 132 59 43 chr13 119089816 119090140 -1194172 + ORR1A4 LTR MaLR 1 329 0 1 1493 395 320 50 39 chr13 119090140 119090254 -1194058 - Lx8 LINE L1 -1162 6311 6195 1 1493 216 0 0 0 chr13 119090254 119090278 -1194034 + (TG)n Simple_repeat Simple_repeat 1 24 0 1 1493 395 320 50 39 chr13 119090278 119090446 -1193866 - Lx8 LINE L1 -1279 6194 6026 1 1493 393 310 77 6 chr13 119090447 119090603 -1193709 + Lx8 LINE L1 7154 7320 -153 1 1493 545 42 0 14 chr13 119090618 119090691 -1193621 + (GGGAGA)n Simple_repeat Simple_repeat 5 76 0 1 1493 501 316 0 31 chr13 119090831 119090986 -1193326 - MLT1A0 LTR MaLR 0 365 216 1 1493 815 221 78 62 chr13 119090986 119091294 -1193018 + RLTR15 LTR ERVK 1 313 -46 1 1493 352 306 138 48 chr13 119091335 119091524 -1192788 - MLT1A0 LTR MaLR -146 219 14 1 1493 414 0 0 0 chr13 119091614 119091660 -1192652 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1493 1436 258 71 12 chr13 119091670 119092235 -1192077 + Lx8 LINE L1 3978 4575 -1305 1 1493 225 0 0 0 chr13 119092237 119092262 -1192050 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 1 1493 4431 104 4 35 chr13 119092273 119092961 -1191351 - Lx3B LINE L1 -3 6970 6304 1 1493 1520 127 8 19 chr13 119092964 119093221 -1191091 - L1_Mur1 LINE L1 -378 5508 5255 1 1493 2107 314 71 17 chr13 119093231 119094326 -1189986 + Lx8 LINE L1 4596 5749 -131 1 1493 2063 329 80 17 chr13 119094329 119095006 -1189306 + Lx8 LINE L1 6134 6857 -616 1 1493 201 39 0 0 chr13 119095006 119095032 -1189280 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1 1493 2063 329 80 17 chr13 119095032 119095431 -1188881 + Lx8 LINE L1 6858 7278 -195 1 1493 378 0 0 0 chr13 119095520 119095562 -1188750 + (GA)n Simple_repeat Simple_repeat 1 42 0 1 1493 769 245 31 37 chr13 119096576 119096767 -1187545 + B3A SINE B2 3 192 -6 1 1493 865 259 19 5 chr13 119096789 119097002 -1187310 - B3 SINE B2 0 216 1 1 1493 336 200 30 0 chr13 119097200 119097300 -1187012 + GA-rich Low_complexity Low_complexity 3 105 0 1 1493 203 0 37 0 chr13 119097658 119097685 -1186627 + (TGGGGG)n Simple_repeat Simple_repeat 2 29 0 1 1493 644 289 39 38 chr13 119098401 119098646 -1185666 + MLT1D LTR MaLR 248 471 -34 1 1493 235 308 169 43 chr13 119099089 119099296 -1185016 - L1M4b LINE L1 -6996 338 106 1 1493 362 241 60 0 chr13 119099337 119099420 -1184892 + MTEa LTR MaLR 278 365 -14 1 1493 260 316 96 6 chr13 119099423 119099579 -1184733 + L1MD1 LINE L1 6081 6334 -25 1 1493 461 314 219 16 chr13 119100126 119100437 -1183875 - Lx8 LINE L1 -127 7346 6973 1 1493 272 148 16 0 chr13 119100564 119100625 -1183687 + (TG)n Simple_repeat Simple_repeat 1 62 0 1 1493 500 286 124 56 chr13 119101552 119101819 -1182493 + B4A SINE B4 8 292 0 1 1493 513 0 0 0 chr13 119102325 119102382 -1181930 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 1 1493 198 0 0 0 chr13 119102383 119102405 -1181907 + (CAAG)n Simple_repeat Simple_repeat 1 22 0 1 1493 827 232 15 30 chr13 119103822 119104022 -1180290 - B3 SINE B2 -19 197 1 1 1493 2249 120 3 6 chr13 119104065 119104392 -1179920 - ORR1A2 LTR MaLR -1 326 1 1 1493 1001 246 195 7 chr13 119104760 119105067 -1179245 - ORR1D2 LTR MaLR -3 367 3 1 1493 654 294 68 5 chr13 119105765 119105984 -1178328 + B4A SINE B4 42 274 -18 1 1493 393 22 0 0 chr13 119106004 119106050 -1178262 + (CA)n Simple_repeat Simple_repeat 1 46 0 1 1493 459 14 53 27 chr13 119106057 119106132 -1178180 + (CAGAGA)n Simple_repeat Simple_repeat 2 78 0 1 1493 222 62 0 0 chr13 119106206 119106238 -1178074 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1 1493 38035 42 4 4 chr13 119106264 119112627 -1171685 - L1Md_T LINE L1 -1 6584 122 1 1493 2585 133 18 40 chr13 119113690 119114136 -1170176 + RMER6B LTR ERVK 1 436 -25 1 1493 913 310 41 43 chr13 119114395 119114880 -1169432 - Lx7 LINE L1 -1304 6392 5909 1 1493 22 0 0 0 chr13 119115083 119115105 -1169207 + AT_rich Low_complexity Low_complexity 1 22 0 1 1493 575 293 0 0 chr13 119115252 119115385 -1168927 + RSINE1 SINE B4 4 136 -29 1 1493 26 0 0 0 chr13 119115387 119115413 -1168899 + AT_rich Low_complexity Low_complexity 1 26 0 1 1493 35 41 0 0 chr13 119116146 119116195 -1168117 + AT_rich Low_complexity Low_complexity 1 49 0 1 1493 3252 260 26 34 chr13 119116195 119117258 -1167054 - L1_Mur3 LINE L1 -2888 2992 1938 1 1493 5100 234 94 38 chr13 119117263 119117682 -1166630 - L1_Rod LINE L1 -2138 3709 3246 1 1493 687 25 0 0 chr13 119117682 119117763 -1166549 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 1 1493 5100 234 94 38 chr13 119117763 119117791 -1166521 - L1_Rod LINE L1 -2602 3245 3220 1 1493 5924 28 11 11 chr13 119117791 119118507 -1165805 - L1Md_F2 LINE L1 0 6582 5867 1 1493 5100 234 94 38 chr13 119118507 119120006 -1164306 - L1_Rod LINE L1 -2628 3219 1652 1 1493 366 243 0 0 chr13 119120006 119120109 -1164203 + C-rich Low_complexity Low_complexity 6 108 0 1 1493 388 277 40 7 chr13 119120109 119120258 -1164054 - L1_Rod LINE L1 -4193 1654 1501 1 1493 544 14 0 27 chr13 119121619 119121694 -1162618 + (TTTA)n Simple_repeat Simple_repeat 4 76 0 1 1493 536 105 0 0 chr13 119121694 119121770 -1162542 - BC1_Mm scRNA scRNA -76 76 1 1 1493 3671 233 61 74 chr13 119122243 119122403 -1161909 + Lx7 LINE L1 6324 6555 -1089 1 1493 660 45 319 43 chr13 119122403 119122519 -1161793 + B1_Mus1 SINE Alu 1 148 0 1 1493 3671 238 70 64 chr13 119122519 119123657 -1160655 + Lx7 LINE L1 6432 7696 0 1 1493 234 211 18 0 chr13 119123681 119123738 -1160574 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 1 1493 1237 276 64 16 chr13 119124030 119124405 -1159907 + MTD LTR MaLR 13 405 -14 1 1493 2540 111 14 22 chr13 119124597 119125010 -1159302 + Lx LINE L1 6245 6654 0 1 1493 1422 28 12 4 chr13 119125148 119125396 -1158916 + (CATATA)n Simple_repeat Simple_repeat 1 250 0 1 1493 189 0 0 0 chr13 119125867 119125888 -1158424 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 1 1493 25 75 0 0 chr13 119126053 119126106 -1158206 + AT_rich Low_complexity Low_complexity 1 53 0 1 1493 811 261 42 5 chr13 119126231 119126420 -1157892 + B3 SINE B2 1 196 -20 1 1493 758 285 0 5 chr13 119126529 119126744 -1157568 + B3 SINE B2 2 215 -1 2 1493 4517 63 23 3 chr13 119126876 119127478 -1156834 - L1Md_F2 LINE L1 -1 6581 5968 2 1493 482 155 102 0 chr13 119129095 119129209 -1155103 - RMER1B Other Other -5 1061 965 2 1493 1093 147 65 14 chr13 119129265 119129479 -1154833 + URR1B DNA MER1_type 1 225 0 2 1493 1282 109 16 0 chr13 119129494 119129678 -1154634 - B2_Mm2 SINE B2 -8 187 1 2 1493 245 382 95 6 chr13 119132251 119132430 -1151882 + LTR16A LTR ERVL 242 436 -15 2 1493 254 347 0 0 chr13 119132818 119132893 -1151419 + B1_Mur2 SINE Alu 58 132 -17 2 1493 506 80 0 10 chr13 119134050 119134125 -1150187 + L1Md_T LINE L1 5526 5615 -559 2 1493 8396 36 0 0 chr13 119134125 119135121 -1149191 + L1Md_T LINE L1 5587 6582 0 2 1493 24 0 0 0 chr13 119135589 119135613 -1148699 + AT_rich Low_complexity Low_complexity 1 24 0 2 1493 189 353 109 25 chr13 119135832 119135951 -1148361 + MIRb SINE MIR 1 129 -139 2 1493 526 276 62 38 chr13 119136759 119136970 -1147342 + B4A SINE B4 4 219 -73 2 1493 222 136 0 0 chr13 119136970 119137014 -1147298 + (CAAA)n Simple_repeat Simple_repeat 1 44 0 2 1493 23 0 0 0 chr13 119137016 119137039 -1147273 + AT_rich Low_complexity Low_complexity 1 23 0 2 1493 303 372 23 0 chr13 119138610 119138739 -1145573 + RSINE1 SINE B4 1 132 -33 2 1493 765 65 0 0 chr13 119138766 119138874 -1145438 + (CA)n Simple_repeat Simple_repeat 1 108 0 2 1493 526 264 0 14 chr13 119139745 119140044 -1144268 + (CA)n Simple_repeat Simple_repeat 1 294 0 2 1493 1516 281 27 16 chr13 119140997 119141446 -1142866 + MT2A LTR ERVL 9 462 -71 2 1493 649 208 70 24 chr13 119141561 119141739 -1142573 - Lx7 LINE L1 0 7696 7533 2 1493 27 73 0 0 chr13 119141739 119141794 -1142518 + AT_rich Low_complexity Low_complexity 1 55 0 2 1493 4179 48 6 0 chr13 119141794 119142311 -1142001 + L1Md_F3 LINE L1 6065 6584 0 2 1493 6299 218 48 68 chr13 119142316 119143931 -1140381 - Lx7 LINE L1 -156 7540 5957 2 186 1253 278 66 38 chr13 119144209 119144681 -1139631 - Lx8 LINE L1 -94 7379 6895 2 1494 1324 194 35 139 chr13 119145471 119145866 -1138446 - RLTR12B LTR ERVK -174 354 1 2 1494 259 91 18 35 chr13 119146100 119146157 -1138155 + (TTTTTG)n Simple_repeat Simple_repeat 1 56 0 2 1494 432 0 0 0 chr13 119147751 119147799 -1136513 + (TC)n Simple_repeat Simple_repeat 2 49 0 2 1494 396 0 0 0 chr13 119147799 119147842 -1136470 + (TG)n Simple_repeat Simple_repeat 1 44 0 2 1494 321 291 117 71 chr13 119148147 119148343 -1135969 - B4A SINE B4 0 292 88 2 1494 21 57 0 0 chr13 119149059 119149094 -1135218 + AT_rich Low_complexity Low_complexity 1 35 0 2 1494 340 324 61 78 chr13 119150659 119150954 -1133358 + B4A SINE B4 3 292 0 2 1494 235 303 18 44 chr13 119150960 119151074 -1133238 - RMER12 LTR ERVK -466 856 746 2 1494 285 185 43 11 chr13 119151519 119151612 -1132700 - Lx4B LINE L1 -2 7056 6961 2 1494 227 291 8 0 chr13 119151995 119152112 -1132200 + GA-rich Low_complexity Low_complexity 2 119 0 2 1494 193 53 0 73 chr13 119153347 119153388 -1130924 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 2 1494 245 51 0 25 chr13 119153711 119153751 -1130561 + (TTTTG)n Simple_repeat Simple_repeat 1 39 0 2 1494 1219 113 21 0 chr13 119154042 119154066 -1130246 - B2_Mm2 SINE B2 -4 191 164 2 1494 360 0 0 0 chr13 119154066 119154106 -1130206 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2 1494 1219 113 21 0 chr13 119154106 119154267 -1130045 - B2_Mm2 SINE B2 -32 163 3 2 1494 23 78 0 0 chr13 119154275 119154326 -1129986 + AT_rich Low_complexity Low_complexity 1 51 0 2 1494 1804 151 41 93 chr13 119154744 119155109 -1129203 + ORR1B1 LTR MaLR 41 386 -8 2 1494 630 333 117 23 chr13 119155661 119156054 -1128258 + MLT1G LTR MaLR 36 465 -126 2 1494 3664 296 95 22 chr13 119157759 119159662 -1124650 + Lx8 LINE L1 5413 7472 -1 2 1494 1605 116 8 16 chr13 119160037 119160291 -1124021 - L1_Mur1 LINE L1 -2871 3015 2764 2 1494 2189 77 25 9 chr13 119160291 119160606 -1123706 + Lx3_Mus LINE L1 6682 7001 -8 2 1494 226 244 75 25 chr13 119163079 119163159 -1121153 + MLT1F2 LTR MaLR 36 119 -441 2 1494 1509 212 111 75 chr13 119163198 119163855 -1120457 + BGLII_B LTR ERVK 1 561 0 2 1494 327 355 19 50 chr13 119164181 119164394 -1119918 - MER102c DNA MER1_type -2106 322 95 2 1494 377 246 69 0 chr13 119165091 119165221 -1119091 + RMER1C Other Other 1198 1336 -6 2 1494 225 0 0 0 chr13 119165221 119165246 -1119066 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 2 1494 704 237 28 0 chr13 119165246 119165423 -1118889 + B3A SINE B2 2 183 -15 2 1494 401 300 33 0 chr13 119165512 119165632 -1118680 + RSINE1 SINE B4 2 125 -40 2 1494 29 28 0 0 chr13 119166026 119166062 -1118250 + AT_rich Low_complexity Low_complexity 1 36 0 2 1494 1451 182 102 9 chr13 119166172 119166504 -1117808 - ORR1B2 LTR MaLR -4 363 1 2 1494 23 0 0 0 chr13 119167205 119167228 -1117084 + AT_rich Low_complexity Low_complexity 1 23 0 2 1494 41 48 0 0 chr13 119167495 119167557 -1116755 + AT_rich Low_complexity Low_complexity 1 62 0 2 1494 631 235 128 0 chr13 119168073 119168252 -1116060 + B3 SINE B2 15 216 0 2 1494 659 210 99 31 chr13 119168643 119168805 -1115507 - B3 SINE B2 -5 211 39 2 1494 1188 36 0 0 chr13 119169971 119170110 -1114202 + B1_Mus2 SINE Alu 1 139 -8 2 1494 24 67 0 0 chr13 119171017 119171062 -1113250 + AT_rich Low_complexity Low_complexity 1 45 0 2 1494 375 336 34 14 chr13 119172203 119172351 -1111961 + RSINE1 SINE B4 13 163 -2 2 1494 419 301 28 33 chr13 119172491 119172673 -1111639 + ID_B1 SINE B4 13 193 -31 2 1494 29 28 0 0 chr13 119173291 119173327 -1110985 + AT_rich Low_complexity Low_complexity 1 36 0 2 1494 354 344 61 30 chr13 119174888 119175086 -1109226 + MIRb SINE MIR 55 258 -10 2 1494 196 230 127 91 chr13 119175098 119175208 -1109104 - MIRb SINE MIR -69 199 86 2 1494 221 200 15 30 chr13 119175623 119175690 -1108622 + (CGG)n Simple_repeat Simple_repeat 1 66 0 2 1494 1156 54 0 20 chr13 119176361 119176512 -1107800 + B1_Mus1 SINE Alu 1 148 0 2 1494 387 318 158 57 chr13 119177060 119177148 -1107164 - L2a LINE L2 -5 3421 3319 2 1494 212 0 36 0 chr13 119177148 119177176 -1107136 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2 1494 1110 58 0 0 chr13 119177176 119177313 -1106999 - B1_Mus2 SINE Alu -10 137 1 2 1494 387 318 158 57 chr13 119177313 119177590 -1106722 - L2a LINE L2 -108 3318 3019 2 1494 1473 197 48 79 chr13 119177662 119178054 -1106258 + RLTR14 LTR ERV1 3 382 0 2 1494 326 367 145 21 chr13 119178249 119178483 -1105829 - MLT1A0 LTR MaLR -80 285 23 2 1494 198 0 0 0 chr13 119178510 119178532 -1105780 + (CA)n Simple_repeat Simple_repeat 1 22 0 2 1494 452 325 87 6 chr13 119178602 119178946 -1105366 + L1MD1 LINE L1 5817 6188 -54 2 1494 263 171 0 0 chr13 119179122 119179163 -1105149 + RSINE1 SINE B4 87 127 -38 2 1494 389 20 0 20 chr13 119179170 119179221 -1105091 + (CA)n Simple_repeat Simple_repeat 1 50 0 2 1494 356 282 103 33 chr13 119179313 119179526 -1104786 + MER20B DNA MER1_type 475 702 -81 2 1494 1431 142 59 11 chr13 119180879 119180904 -1103408 - RLTR20B2 LTR ERVK -69 491 467 2 1494 249 33 0 0 chr13 119180904 119180934 -1103378 + (CA)n Simple_repeat Simple_repeat 2 31 0 2 1494 1431 139 226 28 chr13 119180934 119181320 -1102992 - RLTR20B2 LTR ERVK -94 466 3 2 1494 917 212 11 79 chr13 119181837 119182103 -1102209 + Lx9 LINE L1 7372 7619 -25 2 1494 44 35 0 0 chr13 119182480 119182538 -1101774 + AT_rich Low_complexity Low_complexity 1 58 0 2 1494 264 224 0 0 chr13 119182670 119182737 -1101575 + (CA)n Simple_repeat Simple_repeat 2 68 0 2 1494 217 111 0 0 chr13 119183213 119183249 -1101063 + B3 SINE B2 2 37 -179 2 1494 3179 211 83 19 chr13 119183254 119183402 -1100910 + Lx7 LINE L1 6860 7019 -677 2 1494 495 0 0 0 chr13 119183402 119183457 -1100855 + (CA)n Simple_repeat Simple_repeat 2 56 0 2 1494 3179 211 83 19 chr13 119183457 119184089 -1100223 + Lx7 LINE L1 7020 7690 -6 2 1494 781 253 27 27 chr13 119184139 119184322 -1099990 + B3 SINE B2 34 216 0 2 1494 286 253 36 12 chr13 119185011 119185095 -1099217 + L1M5 LINE L1 5542 5627 -497 2 1494 25 0 0 0 chr13 119185129 119185154 -1099158 + AT_rich Low_complexity Low_complexity 1 25 0 2 1494 210 37 0 0 chr13 119185221 119185248 -1099064 + (TATAA)n Simple_repeat Simple_repeat 4 30 0 2 1494 24 53 0 0 chr13 119185884 119185922 -1098390 + AT_rich Low_complexity Low_complexity 1 38 0 2 1494 737 252 154 38 chr13 119186097 119186468 -1097844 + Lx9 LINE L1 7216 7629 -15 2 1494 835 141 13 47 chr13 119186616 119186765 -1097547 - B1_Mur4 SINE Alu 0 150 7 2 1494 571 345 118 19 chr13 119188216 119188529 -1095783 + Tigger7 DNA MER2_type 4 347 -2144 2 1494 384 296 73 28 chr13 119188893 119189070 -1095242 - L1M5 LINE L1 -739 5501 5317 2 1494 268 264 18 18 chr13 119189228 119189340 -1094972 - L1M5 LINE L1 -1095 5051 4940 2 1494 234 359 100 19 chr13 119189971 119190181 -1094131 + MIR SINE MIR 33 259 -3 2 1494 514 296 29 17 chr13 119190415 119190587 -1093725 + MER5A DNA MER1_type 15 188 -1 2 1494 190 305 105 38 chr13 119191029 119191162 -1093150 + L3 LINE CR1 4136 4277 -212 2 1494 190 283 40 152 chr13 119191159 119191284 -1093028 - L2c LINE L2 -6 3381 3271 2 1494 549 80 0 0 chr13 119191423 119191498 -1092814 + (TCCC)n Simple_repeat Simple_repeat 4 78 0 2 1494 293 238 25 0 chr13 119191561 119191641 -1092671 + GA-rich Low_complexity Low_complexity 3 84 0 2 1494 442 325 119 4 chr13 119192076 119192329 -1091983 - L1MD3 LINE L1 -194 7801 7520 2 1494 23 33 0 0 chr13 119193043 119193073 -1091239 + AT_rich Low_complexity Low_complexity 1 30 0 2 1494 1162 208 83 133 chr13 119193817 119194216 -1090096 - ORR1C2 LTR MaLR -5 379 1 2 1494 544 27 13 13 chr13 119194391 119194466 -1089846 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 2 1494 362 352 0 0 chr13 119194468 119194576 -1089736 - PB1D7 SINE Alu -10 110 3 3 1494 690 101 0 0 chr13 119194904 119195013 -1089299 + (CA)n Simple_repeat Simple_repeat 2 110 0 3 1494 596 144 0 18 chr13 119196244 119196357 -1087955 + CT-rich Low_complexity Low_complexity 1 111 0 3 1494 189 0 0 0 chr13 119196369 119196390 -1087922 + (CA)n Simple_repeat Simple_repeat 2 22 0 3 1494 2082 318 32 21 chr13 119196500 119197315 -1086997 + Lx9 LINE L1 6383 7206 -438 3 1494 4250 60 9 2 chr13 119197658 119198208 -1086104 - L1Md_F2 LINE L1 0 6582 6029 3 1494 375 348 29 24 chr13 119198325 119198534 -1085778 + Lx9 LINE L1 7240 7449 -195 3 1494 633 66 0 0 chr13 119198560 119198651 -1085661 + (TC)n Simple_repeat Simple_repeat 1 91 0 3 1494 216 135 0 0 chr13 119198651 119198688 -1085624 + (CA)n Simple_repeat Simple_repeat 2 38 0 3 1494 221 146 21 0 chr13 119199580 119199628 -1084684 + (CAA)n Simple_repeat Simple_repeat 2 50 0 3 1494 222 37 0 0 chr13 119200120 119200147 -1084165 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 3 1494 983 109 27 0 chr13 119200822 119200969 -1083343 + B2_Mm2 SINE B2 1 151 -44 3 1494 525 16 0 0 chr13 119200973 119201035 -1083277 + (TAAA)n Simple_repeat Simple_repeat 4 65 0 3 1494 225 284 14 0 chr13 119201177 119201199 -1083113 + polypyrimidine Low_complexity Low_complexity 56 77 0 3 1494 510 61 0 0 chr13 119201199 119201265 -1083047 + (TC)n Simple_repeat Simple_repeat 1 66 0 3 1494 225 284 14 0 chr13 119201265 119201316 -1082996 + polypyrimidine Low_complexity Low_complexity 4 55 0 3 1494 767 200 28 0 chr13 119201326 119201471 -1082841 - B1_Mur4 SINE Alu -1 149 1 3 1494 279 0 0 0 chr13 119201729 119201760 -1082552 + (CAAAA)n Simple_repeat Simple_repeat 4 34 0 3 1494 1933 276 73 10 chr13 119201844 119201920 -1082392 - Lx7 LINE L1 -441 7255 7180 3 1494 471 18 0 0 chr13 119201920 119201976 -1082336 + (TC)n Simple_repeat Simple_repeat 2 57 0 3 1494 366 23 0 0 chr13 119201976 119202018 -1082294 + (TG)n Simple_repeat Simple_repeat 2 44 0 3 1494 1933 276 73 10 chr13 119202018 119202530 -1081782 - Lx7 LINE L1 -517 7179 6631 3 1494 545 361 41 65 chr13 119202790 119203083 -1081229 + B4A SINE B4 6 291 -1 3 1494 299 301 7 29 chr13 119203085 119203225 -1081087 + (CA)n Simple_repeat Simple_repeat 1 137 0 3 1494 201 107 107 0 chr13 119203225 119203281 -1081031 + (CAGAGA)n Simple_repeat Simple_repeat 6 67 0 3 1494 757 185 0 12 chr13 119205392 119205562 -1078750 + CT-rich Low_complexity Low_complexity 2 169 0 3 1494 1104 67 0 0 chr13 119205562 119205696 -1078616 - B1_Mus1 SINE Alu -14 134 1 3 1494 876 196 230 38 chr13 119205949 119206112 -1078200 - ORR1D1 LTR MaLR -1 373 165 3 1494 648 0 0 0 chr13 119206112 119206184 -1078128 + (GA)n Simple_repeat Simple_repeat 1 72 0 3 1494 876 196 230 38 chr13 119206184 119206333 -1077979 - ORR1D1 LTR MaLR -210 164 1 3 1494 31 102 0 0 chr13 119207760 119207868 -1076444 + AT_rich Low_complexity Low_complexity 1 108 0 3 1494 346 327 108 45 chr13 119208042 119208356 -1075956 - L1M5 LINE L1 -2129 4017 3684 3 1494 537 288 67 53 chr13 119208360 119208569 -1075743 - B3A SINE B2 -4 212 1 3 1494 31 44 0 0 chr13 119208821 119208866 -1075446 + AT_rich Low_complexity Low_complexity 1 45 0 3 1494 21 0 0 0 chr13 119208980 119209001 -1075311 + AT_rich Low_complexity Low_complexity 1 21 0 3 1494 484 156 28 0 chr13 119209092 119209201 -1075111 - Lx9 LINE L1 -9 7635 7524 3 1494 396 0 0 0 chr13 119209203 119209247 -1075065 + (CA)n Simple_repeat Simple_repeat 2 45 0 3 1494 253 147 27 93 chr13 119209248 119209323 -1074989 - Lx9 LINE L1 -179 7465 7396 3 1494 4067 229 51 5 chr13 119209316 119209493 -1074819 - Lx9 LINE L1 -369 7275 7082 3 1494 618 0 0 35 chr13 119209493 119209578 -1074734 + (TTTTG)n Simple_repeat Simple_repeat 5 86 0 3 1494 4067 229 51 5 chr13 119209578 119210346 -1073966 - Lx9 LINE L1 -563 7081 6288 3 1494 335 279 6 58 chr13 119210355 119210511 -1073801 + Lx9 LINE L1 5905 6052 -1592 3 1494 24 32 0 0 chr13 119211699 119211730 -1072582 + AT_rich Low_complexity Low_complexity 1 31 0 3 1494 723 305 15 0 chr13 119211749 119211952 -1072360 - ID_B1 SINE B4 -17 207 2 3 1494 805 44 18 9 chr13 119212297 119212411 -1071901 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 3 1494 1176 62 0 0 chr13 119212421 119212566 -1071746 - B1_Mm SINE Alu -2 145 1 3 1494 1200 247 15 51 chr13 119212935 119213268 -1071044 - Lx6 LINE L1 -26 7434 7114 3 1494 23 54 0 0 chr13 119214808 119214845 -1069467 + AT_rich Low_complexity Low_complexity 1 37 0 3 1494 263 324 52 44 chr13 119215197 119215426 -1068886 - RLTR15 LTR ERVK -81 278 48 3 1494 214 243 67 67 chr13 119215808 119215883 -1068429 + L2b LINE L2 3209 3283 -92 3 1494 563 112 0 10 chr13 119216347 119216446 -1067866 + (TG)n Simple_repeat Simple_repeat 1 98 0 3 1494 563 245 7 14 chr13 119219300 119219441 -1064871 + B1F2 SINE Alu 5 144 -5 3 1494 342 196 16 2 chr13 119219918 119219990 -1064322 + B4A SINE B4 24 96 -69 3 1494 372 94 0 0 chr13 119219991 119220044 -1064268 + (GGA)n Simple_repeat Simple_repeat 3 55 0 3 1494 210 146 0 59 chr13 119220046 119220097 -1064215 + GA-rich Low_complexity Low_complexity 3 50 0 3 1494 537 310 122 6 chr13 119220097 119220253 -1064059 + B4 SINE B4 94 267 -25 3 1494 489 34 0 0 chr13 119220266 119220325 -1063987 + (CA)n Simple_repeat Simple_repeat 1 59 0 3 1494 2148 192 95 0 chr13 119220439 119220861 -1063451 - RMER1B Other Other -15 1051 590 3 1494 1518 258 40 60 chr13 119220855 119221291 -1063021 - RMER1B Other Other -618 448 39 3 1494 3401 28 5 0 chr13 119221758 119222152 -1062160 + MTA_Mm LTR MaLR 1 396 0 3 1494 11800 168 68 43 chr13 119222501 119223503 -1060809 - L1_Mur3 LINE L1 -106 5774 4763 3 1494 573 15 0 0 chr13 119223503 119223569 -1060743 + (TG)n Simple_repeat Simple_repeat 2 67 0 3 1494 11800 168 68 43 chr13 119223569 119225255 -1059057 - L1_Mur3 LINE L1 -1118 4762 3017 3 1494 1714 102 79 0 chr13 119225259 119225513 -1058799 + Lx4A LINE L1 6454 6727 -331 3 1494 320 82 206 32 chr13 119225510 119225573 -1058739 - L1_Mur3 LINE L1 -2869 3011 2938 3 1494 189 0 0 0 chr13 119225998 119226019 -1058293 + (TTA)n Simple_repeat Simple_repeat 2 22 0 3 1494 1141 76 0 0 chr13 119226019 119226164 -1058148 - B1_Mm SINE Alu -2 145 1 3 1494 478 96 32 0 chr13 119226268 119226362 -1057950 + (TCTCTG)n Simple_repeat Simple_repeat 4 100 0 3 1494 425 224 0 6 chr13 119226364 119226521 -1057791 + GA-rich Low_complexity Low_complexity 1 156 0 3 1494 797 121 16 0 chr13 119227066 119227190 -1057122 - B1_Mus1 SINE Alu -21 127 2 3 1494 234 128 0 0 chr13 119227888 119227927 -1056385 + (TCCCC)n Simple_repeat Simple_repeat 4 42 0 3 1494 315 71 0 0 chr13 119227997 119228039 -1056273 + (GA)n Simple_repeat Simple_repeat 2 43 0 3 1494 806 38 9 0 chr13 119228039 119228145 -1056167 + (GAAAA)n Simple_repeat Simple_repeat 5 111 0 3 1494 21 0 0 0 chr13 119228238 119228259 -1056053 + AT_rich Low_complexity Low_complexity 1 21 0 3 1494 23 0 0 0 chr13 119229293 119229316 -1054996 + AT_rich Low_complexity Low_complexity 1 23 0 3 1494 28 86 0 0 chr13 119229419 119229489 -1054823 + AT_rich Low_complexity Low_complexity 1 70 0 3 1494 229 111 44 0 chr13 119229510 119229555 -1054757 + RLTR13D3 LTR ERVK 1006 1052 -62 3 1494 29 28 0 0 chr13 119229840 119229876 -1054436 + AT_rich Low_complexity Low_complexity 1 36 0 3 1494 273 260 58 29 chr13 119229967 119230070 -1054242 - MTD LTR MaLR -10 409 304 3 1494 301 289 144 0 chr13 119230951 119231041 -1053271 + RMER15-int LTR ERVL 1082 1184 -3815 3 1494 182 322 130 16 chr13 119231172 119231295 -1053017 + L3 LINE CR1 3519 3655 -834 3 1494 219 69 0 0 chr13 119231466 119231495 -1052817 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 3 1494 729 234 112 20 chr13 119231601 119231797 -1052515 - B3 SINE B2 -2 214 1 3 1494 23 0 0 0 chr13 119232091 119232114 -1052198 + AT_rich Low_complexity Low_complexity 1 23 0 3 1494 2161 158 3 5 chr13 119232233 119232412 -1051900 + L1_Mur2 LINE L1 3306 3482 -2395 3 1494 204 67 0 0 chr13 119232412 119232442 -1051870 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 3 1494 2161 158 3 5 chr13 119232442 119232651 -1051661 + L1_Mur2 LINE L1 3483 3692 -2185 3 1494 446 301 36 60 chr13 119232839 119233005 -1051307 - B3A SINE B2 -1 197 36 3 1494 243 0 0 0 chr13 119233037 119233064 -1051248 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 3 1494 607 173 9 0 chr13 119233075 119233185 -1051127 - ORR1D1 LTR MaLR 0 384 274 3 1494 527 167 74 16 chr13 119233191 119233313 -1050999 - BC1_Mm scRNA scRNA -23 129 1 3 1494 1059 213 83 54 chr13 119233313 119233591 -1050721 - ORR1D1 LTR MaLR -88 286 1 3 1494 594 51 0 0 chr13 119235730 119235808 -1048504 + (GA)n Simple_repeat Simple_repeat 2 79 0 3 1494 486 250 67 0 chr13 119235812 119235932 -1048380 - B1_Mur1 SINE Alu -20 129 2 3 1494 46 19 0 0 chr13 119235935 119235988 -1048324 + AT_rich Low_complexity Low_complexity 1 53 0 3 1494 713 283 94 4 chr13 119236001 119236246 -1048066 + Tigger5 DNA MER2_type 2140 2406 0 3 1494 478 243 39 65 chr13 119236387 119236541 -1047771 + MER20 DNA MER1_type 16 165 -54 3 1494 32 26 0 0 chr13 119236953 119236992 -1047320 + AT_rich Low_complexity Low_complexity 1 39 0 3 1494 24 32 0 0 chr13 119237387 119237418 -1046894 + AT_rich Low_complexity Low_complexity 1 31 0 3 1494 28 0 0 0 chr13 119237521 119237549 -1046763 + AT_rich Low_complexity Low_complexity 1 28 0 3 1494 482 315 43 22 chr13 119239271 119239527 -1044785 + MLT1A1 LTR MaLR 91 390 -18 3 1494 189 74 0 0 chr13 119240462 119240489 -1043823 + (CAA)n Simple_repeat Simple_repeat 3 29 0 3 1494 26 0 0 0 chr13 119241097 119241123 -1043189 + AT_rich Low_complexity Low_complexity 1 26 0 3 1494 187 312 75 11 chr13 119242418 119242512 -1041800 + L3 LINE CR1 2801 2900 -1589 3 1494 5598 56 14 0 chr13 119243025 119243726 -1040586 - L1_Mus1 LINE L1 -242 6325 5615 3 1494 1689 74 0 0 chr13 119243726 119243943 -1040369 + L1_Mus1 LINE L1 6349 6565 -2 3 1494 184 120 40 0 chr13 119244145 119244195 -1040117 + T-rich Low_complexity Low_complexity 4 55 0 3 1494 2578 104 17 2 chr13 119244204 119244619 -1039693 - MusHAL1 LINE L1 -458 2254 1834 3 1494 4540 63 22 38 chr13 119244619 119245247 -1039065 + L1_Mus2 LINE L1 5948 6565 -1 3 1494 425 332 59 10 chr13 119245397 119245601 -1038711 - Lx8 LINE L1 -1034 6439 6226 3 1494 2497 203 113 15 chr13 119245605 119246190 -1038122 + RLTR26 LTR ERVK 1 642 0 3 1494 369 62 0 0 chr13 119246229 119246277 -1038035 + (TG)n Simple_repeat Simple_repeat 1 48 0 4 1494 226 300 16 91 chr13 119246281 119246402 -1037910 - Lx8 LINE L1 -1293 6180 6069 3 1494 1698 270 21 112 chr13 119246390 119247192 -1037120 - Lx8 LINE L1 -2308 5574 4815 3 1494 497 301 55 12 chr13 119247196 119247361 -1036951 + Lx9 LINE L1 6605 6776 -868 4 1494 422 233 78 0 chr13 119247362 119247465 -1036847 + MTD LTR MaLR 295 405 -14 4 1494 2458 65 0 0 chr13 119247475 119247784 -1036528 + L1_Mus1 LINE L1 6258 6566 -1 4 1494 473 310 117 14 chr13 119248906 119249119 -1035193 + MamSINE1 SINE tRNA 2 236 -54 4 1494 31268 72 34 4 chr13 119249810 119254691 -1029621 + L1Md_F2 LINE L1 560 5586 -297 4 1494 7418 71 9 15 chr13 119254691 119255691 -1028621 + L1Md_F2 LINE L1 5587 6580 -2 4 1494 3431 23 2 0 chr13 119256029 119256424 -1027888 - MTA_Mm LTR MaLR 0 396 1 4 1494 2694 134 41 9 chr13 119256560 119257020 -1027292 - Lx3A LINE L1 0 6981 6507 4 1494 6283 147 23 3 chr13 119257616 119258644 -1025668 + Lx2B LINE L1 5909 6957 -43 4 1494 815 123 123 0 chr13 119258652 119258806 -1025506 + Lx3A LINE L1 6807 6979 -2 4 1494 690 218 0 0 chr13 119258806 119258962 -1025350 + GA-rich Low_complexity Low_complexity 1 156 0 4 1494 391 333 33 49 chr13 119259694 119259877 -1024435 + MER20 DNA MER1_type 35 214 -5 4 1494 545 256 127 22 chr13 119261028 119261256 -1023056 + Lx8 LINE L1 7217 7468 -5 4 1494 195 42 0 0 chr13 119262081 119262105 -1022207 + (TA)n Simple_repeat Simple_repeat 2 25 0 4 1494 839 200 112 24 chr13 119262216 119262421 -1021891 - URR1B DNA MER1_type -2 223 1 4 1494 204 361 35 63 chr13 119262711 119262853 -1021459 - L2b LINE L2 -4 3371 3234 4 1494 8271 32 7 5 chr13 119262938 119263931 -1020381 - L1Md_F2 LINE L1 -1 6581 5587 4 1494 658 229 40 40 chr13 119264085 119264235 -1020077 + B1_Mur4 SINE Alu 1 150 0 4 1494 202 337 150 52 chr13 119264482 119264889 -1019423 - L2b LINE L2 -706 2713 2267 4 1494 404 267 0 0 chr13 119265143 119265229 -1019083 + B4A SINE B4 1 86 -206 4 1494 436 259 18 18 chr13 119265676 119265790 -1018522 + B4A SINE B4 157 270 -22 4 1494 213 39 0 0 chr13 119265819 119265845 -1018467 + (CA)n Simple_repeat Simple_repeat 2 27 0 4 1494 183 129 0 0 chr13 119265869 119265900 -1018412 + (TAAAA)n Simple_repeat Simple_repeat 2 32 0 4 1494 3673 34 2 5 chr13 119266511 119266958 -1017354 - L1Md_F2 LINE L1 0 6582 6137 4 1494 441 292 81 34 chr13 119268951 119269185 -1015127 - L1MA5 LINE L1 -1 6299 6055 4 1494 381 262 165 91 chr13 119269205 119269381 -1014931 + ORR1E LTR MaLR 4 192 -167 4 1494 2116 247 82 4 chr13 119269384 119269944 -1014368 + Lx9 LINE L1 6350 6953 -691 4 1494 464 264 26 46 chr13 119270011 119270162 -1014150 - Lx6 LINE L1 -176 7284 7137 4 1494 708 343 61 36 chr13 119270157 119270550 -1013762 + Lx8 LINE L1 6628 7030 -443 4 1494 213 94 0 0 chr13 119273176 119273208 -1011104 + (T)n Simple_repeat Simple_repeat 1 32 0 4 186 654 13 0 0 chr13 119275496 119275571 -1008741 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 4 1495 810 167 28 0 chr13 119275589 119275733 -1008579 - Lx4A LINE L1 -55 7003 6856 4 1495 1271 133 6 3 chr13 119275731 119275937 -1008375 + Lx4A LINE L1 6296 6489 -569 4 1495 3424 133 29 55 chr13 119276939 119277570 -1006742 + Lx LINE L1 6038 6651 -3 4 1495 183 80 0 0 chr13 119278188 119278213 -1006099 + (GAAA)n Simple_repeat Simple_repeat 2 26 0 4 1495 999 161 0 0 chr13 119278213 119278393 -1005919 + GA-rich Low_complexity Low_complexity 1 180 0 4 1495 345 159 0 0 chr13 119279061 119279124 -1005188 + (TGGA)n Simple_repeat Simple_repeat 3 65 0 4 1495 513 0 0 0 chr13 119280167 119280224 -1004088 + (TG)n Simple_repeat Simple_repeat 1 57 0 4 1495 259 330 78 26 chr13 119280791 119280906 -1003406 - ID_B1 SINE B4 -8 216 96 4 1495 2001 282 136 43 chr13 119280939 119282672 -1001640 + L1M2 LINE L1 2768 4662 -1481 4 1495 309 51 0 0 chr13 119282775 119282814 -1001498 + (CA)n Simple_repeat Simple_repeat 2 40 0 4 1495 800 133 0 6 chr13 119282814 119282995 -1001317 + (GA)n Simple_repeat Simple_repeat 1 180 0 4 1495 738 65 92 18 chr13 119283040 119283149 -1001163 - BGLII LTR ERVK 0 421 305 4 1495 2465 179 150 40 chr13 119283327 119284130 -1000182 - RMER6C LTR ERVK 0 720 1 4 1495 1413 176 30 0 chr13 119284144 119284411 -999901 + Lx2A1 LINE L1 6729 7003 -5 4 1495 2719 55 3 0 chr13 119284413 119284757 -999555 + L1Md_F2 LINE L1 6231 6575 -7 4 1495 731 169 17 57 chr13 119284824 119285000 -999312 - Lx7 LINE L1 -16 7680 7512 4 1495 228 302 71 30 chr13 119285204 119285303 -999009 + LTR58 LTR ERV1 16 118 -561 4 1495 486 49 0 0 chr13 119286291 119286352 -997960 + (TG)n Simple_repeat Simple_repeat 1 61 0 4 1495 560 14 14 0 chr13 119286352 119286420 -997892 + (GA)n Simple_repeat Simple_repeat 1 70 0 4 1495 405 312 131 7 chr13 119286674 119286819 -997493 - B4 SINE B4 -126 166 4 4 1495 269 399 72 25 chr13 119287527 119287959 -996353 - L2 LINE L2 -2401 1018 567 4 1495 785 315 70 24 chr13 119287959 119288391 -995921 - MLT1D LTR MaLR 0 505 31 4 1495 1886 175 55 30 chr13 119288393 119288759 -995553 - MTC LTR MaLR 0 421 47 4 1495 186 227 0 0 chr13 119288759 119288803 -995509 + CT-rich Low_complexity Low_complexity 1 44 0 4 1495 801 116 27 36 chr13 119288794 119289017 -995295 + C-rich Low_complexity Low_complexity 1 220 0 4 1495 462 36 0 0 chr13 119289033 119289089 -995223 + (TG)n Simple_repeat Simple_repeat 1 56 0 4 1495 219 69 0 0 chr13 119289229 119289258 -995054 + (TGG)n Simple_repeat Simple_repeat 1 29 0 4 1495 222 259 0 0 chr13 119289258 119289312 -995000 + (TG)n Simple_repeat Simple_repeat 1 54 0 4 1495 667 46 46 0 chr13 119289336 119289444 -994868 + (GA)n Simple_repeat Simple_repeat 2 114 0 4 1495 487 262 27 82 chr13 119289945 119290128 -994184 + LTR85a LTR Gypsy? 530 702 0 4 1495 234 0 0 0 chr13 119290266 119290292 -994020 + (CA)n Simple_repeat Simple_repeat 1 26 0 4 1495 1392 251 96 8 chr13 119290791 119291144 -993168 + MTD LTR MaLR 1 384 -35 4 1495 320 0 25 0 chr13 119291711 119291751 -992561 + (TA)n Simple_repeat Simple_repeat 2 42 0 4 1495 295 260 77 39 chr13 119292155 119292259 -992053 + MLT1A1 LTR MaLR 301 408 0 4 1495 2509 131 11 0 chr13 119292752 119293126 -991186 + Lx5 LINE L1 5485 5862 -15 4 1495 3035 225 47 3 chr13 119293244 119293881 -990431 - Lx5 LINE L1 0 7050 6386 4 1495 2246 180 115 16 chr13 119293879 119294375 -989937 + Lx5 LINE L1 5835 6379 -671 4 1495 592 303 40 6 chr13 119295525 119295701 -988611 + B3A SINE B2 1 182 -16 4 1495 396 0 0 0 chr13 119295726 119295770 -988542 + (TAA)n Simple_repeat Simple_repeat 2 45 0 4 1495 211 333 58 19 chr13 119296962 119297066 -987246 - L3 LINE CR1 -1187 3302 3195 4 1495 21 71 0 0 chr13 119297390 119297432 -986880 + AT_rich Low_complexity Low_complexity 1 42 0 4 1495 764 281 83 79 chr13 119297433 119297927 -986385 - Lx9 LINE L1 -141 7503 7008 4 1495 699 46 0 0 chr13 119297929 119298016 -986296 + (TG)n Simple_repeat Simple_repeat 1 87 0 4 1495 560 281 85 12 chr13 119298088 119298297 -986015 + Lx9 LINE L1 6362 6671 -973 4 1495 405 0 0 0 chr13 119298301 119298346 -985966 + (TG)n Simple_repeat Simple_repeat 1 45 0 4 1495 371 98 0 16 chr13 119300069 119300131 -984181 + (TG)n Simple_repeat Simple_repeat 2 62 0 4 1495 729 319 94 19 chr13 119300141 119300461 -983851 - Lx9 LINE L1 -216 7428 7085 4 1495 1132 280 12 65 chr13 119300456 119300872 -983440 + Lx9 LINE L1 6567 7049 -595 4 1495 189 74 0 0 chr13 119300939 119300966 -983346 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1495 587 304 57 25 chr13 119301152 119301432 -982880 + B4A SINE B4 3 291 -1 4 1495 741 219 93 0 chr13 119301616 119301863 -982449 - Lx9 LINE L1 -1 7643 7374 4 1495 322 330 28 33 chr13 119301899 119302112 -982200 + ID_B1 SINE B4 5 216 -8 4 1495 180 77 0 0 chr13 119303356 119303382 -980930 + (TTA)n Simple_repeat Simple_repeat 1 26 0 4 1495 31 58 0 0 chr13 119303755 119303807 -980505 + AT_rich Low_complexity Low_complexity 1 52 0 4 1495 28 0 0 0 chr13 119304371 119304399 -979913 + AT_rich Low_complexity Low_complexity 1 28 0 4 1495 183 42 0 0 chr13 119304778 119304802 -979510 + (CAA)n Simple_repeat Simple_repeat 2 25 0 4 1495 1664 224 32 24 chr13 119305081 119305460 -978852 - MER121 Unknown Unknown -22 390 9 4 1495 3361 73 7 9 chr13 119305895 119306352 -977960 - L1Md_F2 LINE L1 -1 6581 6126 4 1495 1154 68 0 7 chr13 119306352 119306499 -977813 + B1_Mus1 SINE Alu 2 147 -1 4 1495 264 130 0 0 chr13 119306500 119306546 -977766 + (A)n Simple_repeat Simple_repeat 1 46 0 4 1495 29 47 0 0 chr13 119306661 119306704 -977608 + AT_rich Low_complexity Low_complexity 1 43 0 4 1495 25 83 0 0 chr13 119306887 119306947 -977365 + AT_rich Low_complexity Low_complexity 1 60 0 4 1495 2759 64 3 3 chr13 119307053 119307411 -976901 + L1_Mus1 LINE L1 6209 6566 -1 4 1495 597 331 49 25 chr13 119307504 119307829 -976483 - RMER5 LTR ERV1 -47 487 155 4 1495 4488 161 29 32 chr13 119307829 119308704 -975608 - L1_Mur2 LINE L1 -1532 4345 3474 4 1495 606 117 0 0 chr13 119308699 119308793 -975519 - L1_Mur2 LINE L1 -2523 3363 3270 4 1495 5716 54 19 0 chr13 119308793 119309510 -974802 + L1_Mm LINE L1 4990 5720 -163 4 1495 3806 144 33 24 chr13 119309502 119309995 -974317 - MusHAL1 LINE L1 -639 2073 1589 4 1495 306 0 0 0 chr13 119309995 119310029 -974283 + (TTTG)n Simple_repeat Simple_repeat 2 35 0 4 1495 3806 144 33 24 chr13 119310029 119310258 -974054 - MusHAL1 LINE L1 -1124 1588 1344 4 1495 4660 166 38 16 chr13 119310252 119311154 -973158 + L1_Mur2 LINE L1 4344 5265 -612 4 1495 38172 10 0 7 chr13 119311150 119316571 -967741 + L1Md_A LINE L1 208 5586 -297 4 1495 8850 12 0 0 chr13 119316571 119317567 -966745 + L1Md_A LINE L1 5587 6582 0 4 1495 363 91 63 25 chr13 119317568 119317647 -966665 + L1_Mur2 LINE L1 5246 5327 -550 4 1495 2308 209 179 30 chr13 119317647 119318322 -965990 - RLTR13C2 LTR ERVK 0 983 558 4 1495 8361 29 6 2 chr13 119318322 119319312 -965000 + L1Md_F2 LINE L1 5587 6580 -2 4 1495 3992 55 11 0 chr13 119319312 119319821 -964491 - RLTR13C2 LTR ERVK -404 579 1 4 1495 3284 122 22 9 chr13 119319834 119320378 -963934 - RMER17A2 LTR ERVK -371 535 1 4 1495 6852 140 42 0 chr13 119320378 119321722 -962590 + Lx2B LINE L1 5331 6726 -274 4 1495 576 0 0 0 chr13 119321722 119321786 -962526 + (TA)n Simple_repeat Simple_repeat 1 64 0 4 1495 6444 197 72 1 chr13 119321786 119322000 -962312 + Lx2B LINE L1 6728 6977 -20 4 1495 23 0 0 0 chr13 119322157 119322180 -962132 + AT_rich Low_complexity Low_complexity 1 23 0 5 1495 265 275 95 42 chr13 119322604 119322699 -961613 + PB1D10 SINE Alu 3 102 -15 5 1495 1177 308 62 18 chr13 119323558 119324111 -960201 + L1_Mur3 LINE L1 4381 4957 -923 5 1495 348 296 0 0 chr13 119324138 119324219 -960093 + B1F SINE Alu 7 87 -62 5 1495 355 273 0 11 chr13 119324239 119324328 -959984 - MT2A LTR ERVL -445 88 1 5 1495 2865 305 74 36 chr13 119324357 119325530 -958782 + Lx8 LINE L1 6200 7417 -56 5 1495 4916 135 52 2 chr13 119325643 119326429 -957883 - Lx2A LINE L1 0 7008 6184 5 1495 2130 108 6 5 chr13 119326429 119326767 -957545 + MusHAL1 LINE L1 1429 1835 -2079 5 1495 1064 202 24 52 chr13 119328552 119328802 -955510 - RLTR11A LTR ERVK -54 474 232 5 1495 4314 133 91 116 chr13 119328903 119328948 -955364 - Lx LINE L1 -7 6647 6608 5 1495 2920 9 3 60 chr13 119328948 119329315 -954997 + ORR1A0 LTR MaLR 1 346 0 5 1495 4314 133 91 116 chr13 119329315 119330271 -954041 - Lx LINE L1 -47 6607 5671 5 1495 477 274 166 0 chr13 119330601 119330758 -953554 + B3A SINE B2 1 183 -15 5 1495 341 364 40 11 chr13 119330909 119331084 -953228 + RMER15 LTR ERVL 372 551 -24 5 1495 336 42 0 0 chr13 119331598 119331646 -952666 - L1_Mus2 LINE L1 0 6566 6519 5 1495 24 53 0 0 chr13 119332120 119332158 -952154 + AT_rich Low_complexity Low_complexity 1 38 0 5 1495 189 307 42 74 chr13 119332637 119332732 -951580 + L2c LINE L2 2970 3061 -326 5 1495 22 35 0 0 chr13 119333237 119333266 -951046 + AT_rich Low_complexity Low_complexity 1 29 0 5 1495 967 255 5 0 chr13 119333371 119333575 -950737 + B3 SINE B2 2 206 -10 5 1495 2972 291 81 34 chr13 119334679 119335359 -948953 + L1_Rod LINE L1 966 1682 -4165 5 1495 602 332 47 0 chr13 119335359 119335552 -948760 + B3 SINE B2 1 202 -14 5 1495 2972 293 84 43 chr13 119335552 119336545 -947767 + L1_Rod LINE L1 1683 2723 -3124 5 1495 2644 138 22 20 chr13 119336545 119336997 -947315 - RLTR11B LTR ERVK 0 453 1 5 1495 2972 293 84 43 chr13 119336997 119337333 -946979 + L1_Rod LINE L1 2724 3058 -2789 5 1495 517 277 35 39 chr13 119337336 119337597 -946715 + L1M2 LINE L1 3469 3750 -2393 5 1495 543 284 139 20 chr13 119337600 119337895 -946417 + Lx7 LINE L1 5589 5918 -1778 5 1495 272 67 0 22 chr13 119338413 119338459 -945853 + Lx9 LINE L1 7593 7637 -7 5 1495 565 264 42 24 chr13 119339579 119339746 -944566 + ORR1D2 LTR MaLR 195 364 -6 5 1495 698 254 62 3 chr13 119339748 119339942 -944370 + ORR1D2-int LTR MaLR 1 202 -1761 5 1495 787 291 33 0 chr13 119340035 119340245 -944067 + B4 SINE B4 4 220 -72 5 1495 231 114 0 0 chr13 119340253 119340288 -944024 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 5 1495 23 0 0 0 chr13 119340753 119340776 -943536 + AT_rich Low_complexity Low_complexity 1 23 0 5 1495 1041 106 0 0 chr13 119341222 119341402 -942910 + (TC)n Simple_repeat Simple_repeat 1 180 0 5 1495 252 77 0 0 chr13 119341404 119341443 -942869 + (TCTCTG)n Simple_repeat Simple_repeat 4 42 0 5 1495 279 114 0 0 chr13 119342191 119342235 -942077 + (TG)n Simple_repeat Simple_repeat 1 44 0 5 1495 198 0 0 0 chr13 119342432 119342454 -941858 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 5 1495 327 285 133 48 chr13 119342502 119342690 -941622 - LTR79 LTR ERVL -20 507 304 5 1495 255 356 79 50 chr13 119342751 119342890 -941422 - LTR79 LTR ERVL -311 216 74 5 1495 951 127 0 0 chr13 119343099 119343272 -941040 + (TC)n Simple_repeat Simple_repeat 2 174 0 5 1495 250 319 191 32 chr13 119343351 119343539 -940773 + MLT1F2 LTR MaLR 327 544 -16 5 1495 314 287 84 32 chr13 119343824 119343979 -940333 - L2a LINE L2 -1 3425 3263 5 1495 1119 286 55 21 chr13 119344018 119344347 -939965 + MTE2a LTR MaLR 4 343 -36 5 1495 203 32 65 0 chr13 119345133 119345164 -939148 + (TCTCTG)n Simple_repeat Simple_repeat 5 37 0 5 1495 599 222 76 33 chr13 119345164 119345201 -939111 + ORR1C2 LTR MaLR 158 198 -186 5 1495 212 59 29 0 chr13 119345201 119345235 -939077 + (TG)n Simple_repeat Simple_repeat 2 36 0 5 1495 599 217 77 29 chr13 119345235 119345399 -938913 + ORR1C2 LTR MaLR 192 362 -12 5 1495 384 250 87 0 chr13 119345665 119345757 -938555 - Lx9 LINE L1 -456 7188 7089 5 1495 261 0 0 0 chr13 119346588 119346617 -937695 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1495 679 163 7 14 chr13 119347583 119347726 -936586 + G-rich Low_complexity Low_complexity 1 142 0 5 1495 4230 144 22 4 chr13 119347811 119348527 -935785 - Lx2B LINE L1 -2 6998 6270 5 1495 30 27 0 0 chr13 119348908 119348945 -935367 + AT_rich Low_complexity Low_complexity 1 37 0 5 1495 22 0 0 0 chr13 119349082 119349104 -935208 + AT_rich Low_complexity Low_complexity 1 22 0 5 1495 243 317 0 0 chr13 119349663 119349723 -934589 - L2a LINE L2 -29 3397 3338 5 1495 18242 15 14 1 chr13 119349860 119351982 -932330 - L1Md_A LINE L1 0 5883 3733 5 1495 5625 41 0 1 chr13 119351982 119352665 -931647 + L1Md_A LINE L1 5901 6582 0 5 1495 1077 177 77 0 chr13 119352953 119353162 -931150 + URR1B DNA MER1_type 1 225 0 5 1495 521 237 53 0 chr13 119353170 119353284 -931028 + B3 SINE B2 71 190 -26 5 1495 879 109 0 0 chr13 119353288 119353426 -930886 + (CA)n Simple_repeat Simple_repeat 2 139 0 5 1495 888 147 11 11 chr13 119354599 119354778 -929534 + CT-rich Low_complexity Low_complexity 2 180 0 5 1495 387 0 0 0 chr13 119355123 119355166 -929146 + (CA)n Simple_repeat Simple_repeat 2 44 0 5 1495 207 0 0 0 chr13 119355181 119355204 -929108 + (GA)n Simple_repeat Simple_repeat 2 24 0 5 1495 228 35 0 0 chr13 119355230 119355259 -929053 + (CA)n Simple_repeat Simple_repeat 2 30 0 5 1495 1124 276 77 6 chr13 119355314 119355650 -928662 - MT2A LTR ERVL -157 376 17 5 1495 785 268 57 14 chr13 119355658 119356047 -928265 - MERVL_2A-int LTR ERVL -13 5748 5287 5 1495 181 333 154 8 chr13 119356645 119356775 -927537 - MIRc SINE MIR -67 201 53 5 1495 24 32 0 0 chr13 119357120 119357151 -927161 + AT_rich Low_complexity Low_complexity 1 31 0 5 1495 1036 86 12 6 chr13 119357813 119357976 -926336 - L1_Mus3 LINE L1 -4 6634 6471 5 1495 295 121 136 0 chr13 119358170 119358236 -926076 - L1Md_T LINE L1 -1 6581 6507 5 1495 457 71 9 0 chr13 119358212 119358280 -926032 - L1_Mus3 LINE L1 -171 6467 6364 5 1495 1631 266 65 15 chr13 119358606 119359130 -925182 - MERVL_2A-int LTR ERVL -327 5434 4885 5 1495 22 56 0 0 chr13 119360802 119360838 -923474 + AT_rich Low_complexity Low_complexity 1 36 0 5 1495 209 301 0 28 chr13 119362207 119362313 -921999 + A-rich Low_complexity Low_complexity 1 103 0 5 1495 24 0 0 0 chr13 119362371 119362395 -921917 + AT_rich Low_complexity Low_complexity 1 24 0 5 1495 747 279 111 44 chr13 119362576 119363052 -921260 + L1MC1 LINE L1 4538 5045 -1101 5 1495 851 104 0 7 chr13 119363092 119363228 -921084 + L1_Mus4 LINE L1 6485 6619 -17 5 1495 468 0 0 0 chr13 119363228 119363280 -921032 + (TAA)n Simple_repeat Simple_repeat 3 54 0 5 1495 1055 311 78 52 chr13 119363322 119364047 -920265 + L1MC1 LINE L1 5459 6209 -124 5 1495 1623 195 64 53 chr13 119364047 119364421 -919891 + ORR1C1 LTR MaLR 1 378 0 5 1495 1055 311 78 52 chr13 119364421 119364480 -919832 + L1MC1 LINE L1 6210 6263 -70 5 1495 2088 31 27 4 chr13 119364551 119364807 -919505 + L1Md_F2 LINE L1 6307 6568 -14 5 1495 21 0 0 0 chr13 119365055 119365076 -919236 + AT_rich Low_complexity Low_complexity 1 21 0 5 1495 552 346 38 19 chr13 119365103 119365296 -919016 - MLT1E2 LTR MaLR -70 557 358 5 1495 3705 32 7 0 chr13 119365296 119365729 -918583 + RLTR10C LTR ERVK 1 436 0 5 1495 552 346 38 19 chr13 119365729 119365744 -918568 - MLT1E2 LTR MaLR -270 357 346 5 1495 692 33 22 0 chr13 119365840 119365930 -918382 + (TTCTC)n Simple_repeat Simple_repeat 4 95 0 5 1495 23 54 0 0 chr13 119366278 119366315 -917997 + AT_rich Low_complexity Low_complexity 1 37 0 5 1495 303 28 0 0 chr13 119368078 119368114 -916198 + (TG)n Simple_repeat Simple_repeat 1 36 0 5 1495 480 48 0 0 chr13 119368116 119368179 -916133 + (GA)n Simple_repeat Simple_repeat 2 64 0 5 1495 376 342 68 8 chr13 119368179 119368297 -916015 - B3A SINE B2 -23 175 51 5 1495 737 328 69 79 chr13 119368591 119369011 -915301 - MER47B DNA MER2_type -1 417 2 5 1495 27 49 0 0 chr13 119369036 119369077 -915235 + AT_rich Low_complexity Low_complexity 1 41 0 5 1495 245 217 60 12 chr13 119369318 119369402 -914910 - L1M3 LINE L1 -3636 2504 2417 5 1495 632 300 99 37 chr13 119369550 119369955 -914357 + Charlie1b DNA MER1_type 50 479 -44 5 1495 181 83 27 27 chr13 119370933 119370970 -913342 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 5 1495 2041 106 13 13 chr13 119371756 119372061 -912251 - Lx LINE L1 -4 6650 6346 5 1495 1349 319 59 47 chr13 119372063 119372850 -911462 + Lx9 LINE L1 6519 7438 -206 5 1495 360 0 0 0 chr13 119372850 119372890 -911422 + (TG)n Simple_repeat Simple_repeat 1 40 0 5 1495 432 0 0 0 chr13 119372890 119372937 -911375 + (GA)n Simple_repeat Simple_repeat 1 48 0 5 1495 941 344 79 53 chr13 119372937 119373023 -911289 + Lx9 LINE L1 7328 7415 -58 5 1495 200 377 57 64 chr13 119373250 119373510 -910802 - L2c LINE L2 -1 3386 3095 5 1495 628 331 216 31 chr13 119375083 119375962 -908350 - L2c LINE L2 -491 2928 1887 5 1495 254 211 0 78 chr13 119376305 119376382 -907930 - B1_Mm SINE Alu 0 147 77 5 1495 211 382 72 74 chr13 119376573 119377166 -907146 - L2c LINE L2 -1886 1533 942 5 1495 299 293 149 75 chr13 119377177 119377365 -906947 + MLT2B3 LTR ERVL 29 230 -324 5 1495 390 339 72 33 chr13 119377214 119377394 -906918 + MTEa LTR MaLR 55 241 -138 5 1495 340 322 51 76 chr13 119377576 119377734 -906578 - RSINE1 SINE B4 -8 157 4 5 1495 22 56 0 0 chr13 119379150 119379186 -905126 + AT_rich Low_complexity Low_complexity 1 36 0 5 1495 8289 32 1 3 chr13 119379303 119380339 -903973 - L1Md_F2 LINE L1 -12 6570 5537 5 1495 356 308 11 0 chr13 119380408 119380499 -903813 + PB1D7 SINE Alu 1 92 -28 5 1495 428 48 0 16 chr13 119381413 119381477 -902835 + (CAA)n Simple_repeat Simple_repeat 1 63 0 5 1495 678 317 141 24 chr13 119381976 119382225 -902087 + B4A SINE B4 1 278 -14 5 1495 2603 116 31 12 chr13 119384468 119384887 -899425 + Lx2 LINE L1 6565 6991 -6 5 1495 32 0 0 0 chr13 119385734 119385766 -898546 + AT_rich Low_complexity Low_complexity 1 32 0 5 1495 207 0 0 0 chr13 119386440 119386463 -897849 + (TG)n Simple_repeat Simple_repeat 2 24 0 5 1495 1134 95 0 0 chr13 119387911 119388059 -896253 - B1_Mus1 SINE Alu 0 148 1 5 1495 856 157 39 151 chr13 119388672 119388904 -895408 - RMER1C Other Other -18 1324 1119 6 1495 733 284 8 67 chr13 119388937 119389190 -895122 + B4A SINE B4 20 257 -35 6 1495 25 0 0 0 chr13 119389300 119389325 -894987 + AT_rich Low_complexity Low_complexity 1 25 0 6 1495 928 143 6 6 chr13 119390421 119390590 -893722 + CT-rich Low_complexity Low_complexity 3 171 0 6 1495 192 25 100 0 chr13 119392221 119392261 -892051 + (TTTAA)n Simple_repeat Simple_repeat 2 45 0 6 1495 23 0 0 0 chr13 119392663 119392686 -891626 + AT_rich Low_complexity Low_complexity 1 23 0 6 1495 301 257 42 42 chr13 119392893 119393031 -891281 + MLT1A1 LTR MaLR 182 346 -44 6 1495 822 71 0 9 chr13 119393208 119393321 -890991 - B1_Mm SINE Alu 0 147 36 6 1495 21 0 0 0 chr13 119394189 119394210 -890102 + GC_rich Low_complexity Low_complexity 1 21 0 6 1495 872 246 46 5 chr13 119394519 119394715 -889597 - B3 SINE B2 -5 211 8 6 1495 180 111 0 0 chr13 119394943 119394970 -889342 + (A)n Simple_repeat Simple_repeat 1 27 0 6 1495 890 290 81 65 chr13 119395697 119396526 -887786 + L1MCb LINE L1 504 1390 -5361 6 1495 831 254 84 62 chr13 119396592 119396962 -887350 + MLT1C LTR MaLR 90 467 0 6 1495 406 254 135 40 chr13 119397038 119397386 -886926 + L1MCb LINE L1 1735 2115 -4636 6 1495 1850 294 57 3 chr13 119397382 119397980 -886332 - Lx8 LINE L1 -575 6898 6269 6 1495 280 189 62 16 chr13 119398077 119398171 -886141 + RMER17D LTR ERVK 378 471 -418 6 1495 423 0 0 0 chr13 119398171 119398218 -886094 + (CA)n Simple_repeat Simple_repeat 2 48 0 6 1495 280 189 62 16 chr13 119398218 119398252 -886060 + RMER17D LTR ERVK 472 511 -378 6 1495 1446 301 71 49 chr13 119398398 119398974 -885338 + Lx8 LINE L1 6873 7461 -12 6 1495 27 49 0 0 chr13 119398974 119399015 -885297 + AT_rich Low_complexity Low_complexity 1 41 0 6 1495 10827 181 56 35 chr13 119399204 119402102 -882210 + Lx7 LINE L1 3440 6422 -1274 6 1495 2584 17 0 0 chr13 119402109 119402408 -881904 + MERVL-int LTR ERVL 3728 4026 -1459 6 1495 3992 215 98 89 chr13 119402408 119403692 -880620 + Lx7 LINE L1 6419 7674 -22 6 1495 307 294 113 50 chr13 119403770 119403992 -880320 + L1MCb LINE L1 3917 4152 -2412 6 1495 26 50 0 0 chr13 119404049 119404089 -880223 + AT_rich Low_complexity Low_complexity 1 40 0 6 1495 373 319 74 44 chr13 119404359 119404483 -879829 - L1MA5A LINE L1 -270 5919 5788 6 1495 360 0 0 0 chr13 119404483 119404523 -879789 + (TG)n Simple_repeat Simple_repeat 2 41 0 6 1495 373 315 69 50 chr13 119404523 119404678 -879634 - L1MA5A LINE L1 -504 5787 5630 6 1495 267 292 137 8 chr13 119404803 119404826 -879486 - B1F SINE Alu 0 149 4 6 1495 360 255 123 0 chr13 119404826 119404932 -879380 - ID_B1 SINE B4 -21 203 85 6 1495 550 291 112 31 chr13 119404949 119405493 -878819 - L1_Rod LINE L1 -434 5449 4828 6 1495 308 33 82 0 chr13 119405497 119405558 -878754 + (TTTG)n Simple_repeat Simple_repeat 1 66 0 6 1495 1118 164 5 35 chr13 119405630 119405832 -878480 - URR1A DNA MER1_type -29 197 2 6 1495 300 291 0 11 chr13 119405833 119405920 -878392 - L1MA5A LINE L1 -1328 4815 4730 6 1496 494 288 114 52 chr13 119407447 119407755 -876557 + Lx8 LINE L1 7147 7473 0 6 1496 254 50 25 0 chr13 119408319 119408359 -875953 + (TTG)n Simple_repeat Simple_repeat 2 42 0 6 1496 249 33 0 0 chr13 119409487 119409517 -874795 + (GGAAA)n Simple_repeat Simple_repeat 1 30 0 6 1496 999 152 0 0 chr13 119409517 119409694 -874618 + GA-rich Low_complexity Low_complexity 2 179 0 6 1496 339 148 0 0 chr13 119410906 119410960 -873352 + B1_Mur3 SINE Alu 85 138 -11 6 1496 522 0 0 0 chr13 119410961 119411019 -873293 + (TAAA)n Simple_repeat Simple_repeat 1 58 0 6 1496 233 57 0 28 chr13 119411288 119411324 -872988 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 6 1496 2097 134 17 30 chr13 119411324 119411686 -872626 - Lx2 LINE L1 -3 6994 6638 6 1496 1471 181 57 3 chr13 119412245 119412528 -871784 + MER121 Unknown Unknown 12 309 -103 6 1496 21 36 0 0 chr13 119413104 119413132 -871180 + AT_rich Low_complexity Low_complexity 1 28 0 6 1496 261 0 0 0 chr13 119414351 119414380 -869932 + (TC)n Simple_repeat Simple_repeat 1 29 0 6 1496 22 35 0 0 chr13 119414923 119414952 -869360 + AT_rich Low_complexity Low_complexity 1 29 0 6 1496 239 367 12 12 chr13 119415173 119415253 -869059 - ID4_ SINE ID -2 81 2 6 1496 467 285 57 95 chr13 119415936 119416223 -868089 + MER102b DNA MER1_type 9 261 -70 6 1496 270 347 27 40 chr13 119417208 119417358 -866954 - MIRm SINE MIR -106 170 23 6 1496 611 220 58 35 chr13 119419206 119419380 -864932 + L1M3 LINE L1 4008 4185 -1955 6 1496 721 117 7 14 chr13 119419383 119419530 -864782 + (GAAA)n Simple_repeat Simple_repeat 3 148 0 6 1496 234 290 96 39 chr13 119419681 119419785 -864527 + L1M3 LINE L1 4129 4238 -1908 6 1496 1602 105 17 0 chr13 119420805 119421064 -863248 + ORR1A2 LTR MaLR 43 336 -58 6 1496 252 0 0 0 chr13 119421067 119421095 -863217 + (A)n Simple_repeat Simple_repeat 1 28 0 6 1496 443 99 0 12 chr13 119422235 119422252 -862060 + (GA)n Simple_repeat Simple_repeat 2 17 0 6 1496 330 26 0 0 chr13 119422252 119422291 -862021 + (TA)n Simple_repeat Simple_repeat 1 39 0 6 1496 443 99 0 12 chr13 119422291 119422355 -861957 + (GA)n Simple_repeat Simple_repeat 2 65 0 6 1496 192 77 0 0 chr13 119422355 119422381 -861931 + (CAGG)n Simple_repeat Simple_repeat 1 26 0 6 1496 1122 0 22 0 chr13 119422436 119422574 -861738 + (TAGA)n Simple_repeat Simple_repeat 4 144 0 6 1496 337 336 89 40 chr13 119423055 119423179 -861133 + RSINE1 SINE B4 32 161 -4 6 1496 1064 279 84 12 chr13 119424085 119424429 -859883 - MTD LTR MaLR 0 419 51 6 1496 362 358 7 7 chr13 119424413 119424548 -859764 - Tigger5 DNA MER2_type -2226 180 46 6 1496 248 306 26 19 chr13 119425278 119425408 -858904 + MIR SINE MIR 103 239 -29 6 1496 313 338 33 53 chr13 119427407 119427557 -856755 - MER3 DNA MER1_type -61 148 2 6 1496 326 23 23 0 chr13 119427658 119427701 -856611 + (TAA)n Simple_repeat Simple_repeat 3 46 0 6 1496 639 304 40 35 chr13 119429223 119429424 -854888 - B4A SINE B4 -1 291 90 6 1496 5809 107 69 14 chr13 119429455 119430381 -853931 + Lx LINE L1 5676 6652 -2 6 1496 522 43 0 0 chr13 119430598 119430667 -853645 + (TG)n Simple_repeat Simple_repeat 1 69 0 6 1496 216 0 0 0 chr13 119430667 119430690 -853622 + (GA)n Simple_repeat Simple_repeat 1 24 0 6 1496 21 57 0 0 chr13 119433196 119433231 -851081 + AT_rich Low_complexity Low_complexity 1 35 0 6 1496 538 315 87 22 chr13 119433319 119433365 -850947 - B3 SINE B2 -17 199 154 6 1496 835 10 0 19 chr13 119433365 119433471 -850841 + (TATATG)n Simple_repeat Simple_repeat 1 104 0 6 1496 541 252 123 2 chr13 119433471 119433609 -850703 - B3A SINE B2 -63 153 3 6 1496 198 0 0 0 chr13 119433622 119433644 -850668 + (TTTTTG)n Simple_repeat Simple_repeat 5 26 0 6 1496 1094 76 7 0 chr13 119433644 119433789 -850523 - B1_Mm SINE Alu 0 147 2 6 1496 789 57 9 0 chr13 119433986 119434092 -850220 + B1_Mus1 SINE Alu 2 108 -40 6 1496 351 44 0 0 chr13 119434318 119434363 -849949 + (CA)n Simple_repeat Simple_repeat 2 46 0 6 1496 666 123 0 0 chr13 119434363 119434493 -849819 + (GA)n Simple_repeat Simple_repeat 1 130 0 6 1496 596 264 160 25 chr13 119434676 119435003 -849309 + MTE2a LTR MaLR 8 372 -2 6 1496 260 282 2 97 chr13 119435072 119435177 -849135 + MIRb SINE MIR 44 144 -124 6 1496 282 56 0 0 chr13 119435546 119435582 -848730 + (CA)n Simple_repeat Simple_repeat 1 36 0 6 1496 441 0 0 0 chr13 119435582 119435630 -848682 + (GA)n Simple_repeat Simple_repeat 2 50 0 6 1496 210 37 0 0 chr13 119435824 119435851 -848461 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 6 1496 327 260 0 13 chr13 119436512 119436590 -847722 + B3A SINE B2 1 77 -121 6 1496 216 0 0 0 chr13 119436850 119436874 -847438 + (T)n Simple_repeat Simple_repeat 1 24 0 6 1496 226 347 30 50 chr13 119436882 119436982 -847330 - B1F SINE Alu -49 100 3 6 1496 512 71 14 0 chr13 119437041 119437111 -847201 - B1_Mus2 SINE Alu 0 147 77 6 1496 720 296 104 42 chr13 119437134 119437567 -846745 + L1_Rod LINE L1 5386 5845 -2 6 1496 1059 141 0 34 chr13 119439962 119440134 -844178 - Lx LINE L1 -341 6667 6548 6 1496 3762 87 4 11 chr13 119440134 119440667 -843645 - L1_Mus2 LINE L1 -1 6565 6037 6 1496 3457 20 2 0 chr13 119440674 119441069 -843243 - MTA_Mm LTR MaLR 0 396 1 6 1496 4789 35 0 17 chr13 119441072 119441662 -842650 - L1Md_F2 LINE L1 -7 6575 5996 6 1496 4235 77 4 0 chr13 119441662 119442214 -842098 - Lx LINE L1 -466 6542 5664 6 1496 2085 111 38 21 chr13 119442220 119442560 -841752 + Lx LINE L1 6308 6653 -1 6 1496 1328 270 61 29 chr13 119442686 119443098 -841214 - BGLII_B LTR ERVK -8 433 9 6 1496 372 181 0 0 chr13 119443316 119443399 -840913 + GA-rich Low_complexity Low_complexity 2 84 0 6 1496 585 307 21 0 chr13 119443503 119443643 -840669 + RSINE1 SINE B4 1 143 -22 6 1496 186 43 0 0 chr13 119443929 119443952 -840360 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6 1496 1642 120 0 0 chr13 119444666 119444900 -839412 - L1_Mm LINE L1 -151 5732 5499 6 1496 2321 152 0 5 chr13 119444896 119445287 -839025 - L1_Mm LINE L1 -819 5064 4676 6 1496 1065 110 0 0 chr13 119446652 119446872 -837440 + (TG)n Simple_repeat Simple_repeat 1 220 0 6 1496 568 316 111 44 chr13 119447281 119447804 -836508 + LTR48B LTR ERV1 4 753 -34 6 1496 438 306 67 13 chr13 119447865 119448014 -836298 + RSINE1 SINE B4 1 157 -8 6 1496 231 36 0 0 chr13 119448167 119448195 -836117 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 6 1496 924 222 136 13 chr13 119448455 119448756 -835556 + Lx9 LINE L1 7265 7602 -42 6 1496 780 172 0 0 chr13 119448964 119449109 -835203 + GA-rich Low_complexity Low_complexity 3 147 0 6 1496 203 246 53 0 chr13 119449620 119449677 -834635 + CT-rich Low_complexity Low_complexity 3 62 0 6 1496 738 259 94 0 chr13 119449722 119449892 -834420 + B3 SINE B2 6 191 -25 6 1496 777 149 77 0 chr13 119449895 119450171 -834141 + Lx9 LINE L1 7316 7643 -1 6 1496 189 147 0 0 chr13 119450225 119450259 -834053 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 6 1496 315 309 111 47 chr13 119450270 119450460 -833852 + L1M4c LINE L1 1370 1571 -5763 7 1496 365 312 44 133 chr13 119450488 119450887 -833425 + MLT1A0 LTR MaLR 16 374 0 7 1496 324 294 62 81 chr13 119450893 119451104 -833208 + L1M4c LINE L1 1702 1908 -5100 7 1496 438 281 100 0 chr13 119451618 119451778 -832534 - Lx8 LINE L1 -545 6928 6753 7 1496 282 304 0 42 chr13 119451831 119451927 -832385 - RSINE1 SINE B4 -72 93 2 7 1496 1303 197 90 17 chr13 119451964 119452310 -832002 - Lx9 LINE L1 -6 7638 7268 7 1496 1771 302 44 12 chr13 119452343 119453043 -831269 - Lx5 LINE L1 0 7050 6454 7 1496 2297 223 97 38 chr13 119453044 119453737 -830575 + Lx5 LINE L1 5687 6420 -630 7 1496 266 336 0 125 chr13 119453770 119453906 -830406 - MIR SINE MIR -116 146 28 7 1496 317 250 0 74 chr13 119453947 119454042 -830270 - MLT2B2 LTR ERVL 0 567 480 7 1496 719 217 6 30 chr13 119454044 119454210 -830102 + B2_Mm2 SINE B2 15 176 -19 7 1496 207 0 0 0 chr13 119454213 119454236 -830076 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 7 1496 323 289 178 18 chr13 119454377 119454546 -829766 - MLT2B2 LTR ERVL -314 201 6 7 1496 22 0 0 0 chr13 119455003 119455025 -829287 + AT_rich Low_complexity Low_complexity 1 22 0 7 1496 234 0 0 0 chr13 119455368 119455394 -828918 + (TTG)n Simple_repeat Simple_repeat 2 27 0 7 1496 360 344 62 19 chr13 119457675 119457933 -826379 + L1M5 LINE L1 3718 3986 -2160 7 1496 35 54 0 0 chr13 119459275 119459331 -824981 + AT_rich Low_complexity Low_complexity 1 56 0 7 1496 217 300 0 0 chr13 119459980 119460030 -824282 + (CCA)n Simple_repeat Simple_repeat 1 50 0 7 1496 378 228 0 0 chr13 119460034 119460135 -824177 + (CAT)n Simple_repeat Simple_repeat 1 101 0 7 1496 336 330 59 34 chr13 119461211 119461415 -822897 - Tigger7 DNA MER2_type 0 2491 2283 7 1496 388 295 0 0 chr13 119461462 119461567 -822745 - Tigger7 DNA MER2_type -2375 116 12 7 1496 268 372 40 52 chr13 119463369 119463542 -820770 + MamRep137 DNA TcMar? 260 430 -14 7 1496 914 263 155 38 chr13 119464039 119464406 -819906 + MTD LTR MaLR 10 419 0 7 1496 788 328 93 24 chr13 119464622 119464997 -819315 + MLT1C LTR MaLR 63 463 -4 7 1496 1192 167 245 0 chr13 119465228 119465514 -818798 + RLTR41 LTR ERV1 1 356 -90 7 1496 1734 148 29 13 chr13 119465853 119466160 -818152 - Lx3B LINE L1 -1 6972 6661 7 1496 395 176 322 7 chr13 119466270 119466419 -817893 - Lx9 LINE L1 -44 7600 7405 7 1496 612 224 193 11 chr13 119467575 119467756 -816556 + B3 SINE B2 3 216 0 7 1496 205 191 0 0 chr13 119468413 119468455 -815857 + A-rich Low_complexity Low_complexity 1 42 0 7 1496 702 210 0 21 chr13 119468949 119468962 -815350 - B1_Mur3 SINE Alu 0 149 138 7 1496 1238 39 6 0 chr13 119468962 119469118 -815194 + (TTTCC)n Simple_repeat Simple_repeat 4 160 0 7 1496 702 210 0 21 chr13 119469118 119469245 -815067 - B1_Mur3 SINE Alu -12 137 12 7 1496 299 265 37 127 chr13 119469151 119469285 -815027 - MT2B LTR ERVL -343 258 137 7 1496 509 172 37 7 chr13 119469864 119469999 -814313 + (TATATG)n Simple_repeat Simple_repeat 2 140 0 7 1496 732 315 14 0 chr13 119470024 119470237 -814075 - B3 SINE B2 0 216 1 7 1496 29 0 0 0 chr13 119470681 119470710 -813602 + AT_rich Low_complexity Low_complexity 1 29 0 7 1496 1108 79 28 11 chr13 119472417 119472597 -811715 - L1_Mus3 LINE L1 -6 6632 6450 7 1496 286 345 43 8 chr13 119473226 119473343 -810969 + B1_Mur1 SINE Alu 21 141 -8 7 1496 198 391 55 0 chr13 119473657 119473767 -810545 + L3 LINE CR1 826 941 -3548 7 1496 978 9 0 0 chr13 119474888 119474999 -809313 + (TTC)n Simple_repeat Simple_repeat 1 111 0 7 1496 270 395 15 36 chr13 119475032 119475195 -809117 + MIR SINE MIR 3 161 -107 7 1496 198 0 0 0 chr13 119475626 119475648 -808664 + (A)n Simple_repeat Simple_repeat 1 22 0 7 1496 22 35 0 0 chr13 119476298 119476327 -807985 + AT_rich Low_complexity Low_complexity 1 29 0 7 1496 4157 96 20 40 chr13 119476798 119477449 -806863 + Lx LINE L1 6011 6648 -6 7 1496 459 85 24 12 chr13 119477491 119477574 -806738 + (GAGAA)n Simple_repeat Simple_repeat 4 87 0 7 1496 1550 0 0 16 chr13 119477574 119477757 -806555 + (GGAGA)n Simple_repeat Simple_repeat 1 180 0 7 1496 1411 17 23 0 chr13 119477758 119477934 -806378 + (GAGAA)n Simple_repeat Simple_repeat 1 180 0 7 1496 474 18 0 0 chr13 119478509 119478564 -805748 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1496 959 152 139 20 chr13 119478571 119478773 -805539 + URR1A DNA MER1_type 1 226 0 7 1496 412 369 58 58 chr13 119478801 119479077 -805235 - B4 SINE B4 -16 276 1 7 1496 386 233 23 12 chr13 119479426 119479537 -804775 + PB1D10 SINE Alu 7 124 -3 7 1496 594 256 0 0 chr13 119481307 119481440 -802872 + B3A SINE B2 1 133 -65 7 1496 303 169 70 0 chr13 119481807 119481878 -802434 + Lx8 LINE L1 7395 7470 -3 7 1496 301 148 45 0 chr13 119483504 119483592 -800720 + (TCTG)n Simple_repeat Simple_repeat 1 92 0 7 1496 268 146 0 0 chr13 119483596 119483637 -800675 + (TG)n Simple_repeat Simple_repeat 2 42 0 7 1496 746 320 84 4 chr13 119483658 119483884 -800428 - MLT2D LTR ERVL -80 334 91 7 1496 246 192 0 0 chr13 119484633 119484685 -799627 + (TA)n Simple_repeat Simple_repeat 1 52 0 7 1496 369 326 51 79 chr13 119484863 119485116 -799196 - LTR16A1 LTR ERVL -2 454 209 7 1496 306 0 0 0 chr13 119485385 119485419 -798893 + (TG)n Simple_repeat Simple_repeat 1 34 0 7 1496 441 0 0 0 chr13 119485419 119485467 -798845 + (GA)n Simple_repeat Simple_repeat 1 49 0 7 1496 417 333 83 34 chr13 119485467 119485672 -798640 - MLT1A0 LTR MaLR -45 320 106 7 1496 681 205 128 26 chr13 119485836 119486031 -798281 + B3 SINE B2 1 215 -1 7 1496 1053 126 0 0 chr13 119486031 119486206 -798106 + (TG)n Simple_repeat Simple_repeat 1 175 0 7 1496 24 32 0 0 chr13 119486577 119486608 -797704 + AT_rich Low_complexity Low_complexity 1 31 0 7 1496 357 344 0 0 chr13 119487085 119487178 -797134 - PB1D7 SINE Alu -27 93 1 7 1496 217 145 0 31 chr13 119487267 119487331 -796981 + T-rich Low_complexity Low_complexity 5 66 0 7 1496 1125 57 0 0 chr13 119487332 119487473 -796839 - B1_Mus2 SINE Alu -6 141 1 7 1496 181 297 0 123 chr13 119487476 119487549 -796763 + L2 LINE L2 1494 1557 -1862 7 1496 1004 75 18 51 chr13 119487620 119487952 -796360 + (ATATG)n Simple_repeat Simple_repeat 1 321 0 7 1496 216 422 87 5 chr13 119488116 119488323 -795989 + L2 LINE L2 2584 2807 -612 7 1496 259 328 0 40 chr13 119488569 119488693 -795619 - L1M5 LINE L1 -1077 5069 4951 7 1496 413 320 54 20 chr13 119488699 119488996 -795316 - L1M5 LINE L1 -2515 3631 3325 7 1496 247 277 90 21 chr13 119489045 119489189 -795123 - L1MC1 LINE L1 -122 6211 6058 7 1496 329 170 14 15 chr13 119489200 119489276 -795036 - B1_Mur3 SINE Alu 0 149 40 7 1496 963 191 174 8 chr13 119489309 119489567 -794745 - L1MC1 LINE L1 -494 5839 5539 7 1496 2007 286 115 71 chr13 119489640 119490230 -794082 - L1MC1 LINE L1 -1307 4839 4177 7 1496 366 91 0 0 chr13 119490230 119490285 -794027 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1496 2007 286 115 71 chr13 119490285 119490690 -793622 - L1MC1 LINE L1 -1970 4176 3817 7 1496 1611 21 0 30 chr13 119490690 119490888 -793424 + B2_Mm1a SINE B2 2 193 0 7 1496 2007 286 115 71 chr13 119490888 119491645 -792667 - L1MC1 LINE L1 -2330 3816 3009 7 1496 295 340 0 9 chr13 119491766 119491873 -792439 - L1MC1 LINE L1 -5627 509 404 7 1496 205 261 16 8 chr13 119492060 119492138 -792174 + GA-rich Low_complexity Low_complexity 1 78 0 7 1496 269 299 120 0 chr13 119492239 119492406 -791906 - L1M5 LINE L1 -2503 3643 3457 7 1496 255 330 117 31 chr13 119492512 119492803 -791509 - L1MC1 LINE L1 -5538 598 283 7 1496 299 292 65 9 chr13 119492803 119492910 -791402 - MLT1L LTR MaLR -206 404 292 7 1496 293 247 143 22 chr13 119492923 119493014 -791298 - MLT1L LTR MaLR -358 252 151 7 1496 328 283 52 26 chr13 119493280 119493396 -790916 + ID_B1 SINE B4 105 223 -1 7 1496 602 231 35 14 chr13 119493412 119493557 -790755 + ORR1D1 LTR MaLR 17 164 -210 7 1496 272 284 12 58 chr13 119493633 119493719 -790593 - ID4_ SINE ID 0 83 2 7 1496 1007 102 0 13 chr13 119494387 119494537 -789775 + B1_Mus1 SINE Alu 7 148 0 7 1496 215 0 67 0 chr13 119494537 119494567 -789745 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 7 1496 621 103 237 8 chr13 119495133 119495238 -789074 + B1_Mus2 SINE Alu 2 134 -13 7 1496 246 32 0 0 chr13 119495238 119495269 -789043 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 7 1496 621 103 237 8 chr13 119495269 119495281 -789031 + B1_Mus2 SINE Alu 135 146 -1 7 1496 1089 45 0 0 chr13 119496314 119496446 -787866 + B1_Mm SINE Alu 3 134 -13 7 1496 1101 131 0 0 chr13 119496447 119496623 -787689 + (GAA)n Simple_repeat Simple_repeat 1 176 0 7 1496 714 245 68 0 chr13 119496863 119497026 -787286 + B3A SINE B2 1 174 -24 7 1496 198 0 0 0 chr13 119497305 119497327 -786985 + (T)n Simple_repeat Simple_repeat 1 22 0 7 1496 1167 54 0 0 chr13 119497331 119497478 -786834 - B1_Mm SINE Alu 0 147 1 7 1496 297 161 35 0 chr13 119497856 119497943 -786369 + (TA)n Simple_repeat Simple_repeat 1 90 0 7 1496 999 90 8 0 chr13 119498451 119498585 -785727 - B1_Mus1 SINE Alu -13 135 1 7 1496 397 331 83 32 chr13 119499360 119499516 -784796 - B4A SINE B4 -128 164 1 7 1496 833 76 0 8 chr13 119502932 119503051 -781261 + (GGAA)n Simple_repeat Simple_repeat 3 120 0 1 1496 225 0 0 0 chr13 119506339 119506364 -777948 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2 1496 26 0 0 0 chr13 119513949 119513975 -770337 + AT_rich Low_complexity Low_complexity 1 26 0 3 1496 848 239 91 0 chr13 119514175 119514201 -770111 - B3 SINE B2 -1 215 190 4 1496 243 0 0 0 chr13 119514201 119514228 -770084 + (TG)n Simple_repeat Simple_repeat 2 28 0 5 1496 848 239 91 0 chr13 119514228 119514398 -769914 - B3 SINE B2 -27 189 2 4 1496 204 302 55 87 chr13 119515261 119515388 -768924 - MIRc SINE MIR -31 237 115 6 1496 268 360 18 9 chr13 119516097 119516209 -768103 + MIRm SINE MIR 39 151 -125 7 1496 1176 34 7 7 chr13 119516500 119516646 -767666 - B1_Mus2 SINE Alu 0 147 2 8 1496 383 353 59 65 chr13 119516652 119516976 -767336 + MLT1D LTR MaLR 172 493 -12 9 1496 990 324 136 34 chr13 119516979 119517487 -766825 + MLT1D-int LTR MaLR 3 575 -796 9 1496 532 0 29 0 chr13 119517487 119517555 -766757 + (CAAAA)n Simple_repeat Simple_repeat 2 71 0 1 1496 990 342 72 74 chr13 119517555 119518412 -765900 + MLT1D-int LTR MaLR 576 1362 -9 9 1496 1134 68 0 7 chr13 119518435 119518583 -765729 - B1_Mus2 SINE Alu 0 147 1 1 1496 728 328 60 53 chr13 119518598 119519087 -765225 + MLT1D LTR MaLR 7 462 -43 9 1496 852 229 13 83 chr13 119519525 119519754 -764558 + B3 SINE B2 1 213 -3 1 1496 522 0 0 0 chr13 119520981 119521039 -763273 + (TC)n Simple_repeat Simple_repeat 2 59 0 1 1496 414 0 0 0 chr13 119521039 119521084 -763228 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1496 805 281 5 0 chr13 119522362 119522565 -761747 - ID_B1 SINE B4 -16 208 5 1 1496 442 207 49 49 chr13 119522578 119522700 -761612 + RSINE1 SINE B4 4 125 -40 1 1496 429 70 0 0 chr13 119522716 119522773 -761539 + (CA)n Simple_repeat Simple_repeat 2 58 0 1 1496 316 253 0 51 chr13 119522824 119522903 -761409 + RSINE1 SINE B4 73 147 -18 1 1496 23 0 0 0 chr13 119522938 119522961 -761351 + AT_rich Low_complexity Low_complexity 1 23 0 1 1496 24 0 0 0 chr13 119523462 119523486 -760826 + AT_rich Low_complexity Low_complexity 1 24 0 2 1496 230 250 27 40 chr13 119524141 119524216 -760096 + 4.5SRNA scRNA scRNA 20 93 -1 2 1496 536 184 16 102 chr13 119524149 119524260 -760052 + B1_Mur2 SINE Alu 32 133 -16 2 1496 360 0 0 0 chr13 119524260 119524300 -760012 + (CA)n Simple_repeat Simple_repeat 1 40 0 2 1496 536 184 16 102 chr13 119524300 119524315 -759997 + B1_Mur2 SINE Alu 134 147 -2 2 1496 234 0 0 0 chr13 119526292 119526318 -757994 + (CA)n Simple_repeat Simple_repeat 1 26 0 2 1496 420 285 104 86 chr13 119526371 119526651 -757661 + B4A SINE B4 1 285 -7 2 1496 202 286 0 18 chr13 119526656 119526713 -757599 + (CA)n Simple_repeat Simple_repeat 1 56 0 2 1496 182 259 167 0 chr13 119527832 119527886 -756426 + L2b LINE L2 3300 3362 -13 2 1496 312 73 14 42 chr13 119528240 119528311 -756001 + (TTTTTA)n Simple_repeat Simple_repeat 2 70 0 2 1496 1108 79 0 0 chr13 119528313 119528452 -755860 - B1_Mus2 SINE Alu -7 140 2 2 1496 264 59 0 0 chr13 119528608 119528642 -755670 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1496 204 125 0 0 chr13 119529373 119529405 -754907 + (T)n Simple_repeat Simple_repeat 1 32 0 3 1496 549 0 0 0 chr13 119532730 119532791 -751521 + (CA)n Simple_repeat Simple_repeat 2 62 0 3 1496 1994 221 94 22 chr13 119535815 119536370 -747942 - Lx9 LINE L1 0 7644 7050 3 1496 266 0 0 29 chr13 119536672 119536707 -747605 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 3 1496 970 90 30 0 chr13 119536707 119536840 -747472 - B1_Mm SINE Alu -10 137 1 3 1496 363 214 17 3 chr13 119537307 119537421 -746891 - B2_Mm2 SINE B2 -1 215 2 3 1497 208 179 0 25 chr13 119538609 119538649 -745663 + (TATATG)n Simple_repeat Simple_repeat 1 39 0 3 1497 926 289 40 54 chr13 119538651 119539130 -745182 - L1MA5 LINE L1 -374 5926 5455 3 1497 614 154 59 8 chr13 119539341 119539459 -744853 + URR1A DNA MER1_type 79 202 -24 3 1497 5228 60 8 5 chr13 119540392 119541063 -743249 - L1Md_F2 LINE L1 -1 6581 5909 4 1497 353 338 33 92 chr13 119541245 119541262 -743050 + ID_B1 SINE B4 81 222 0 4 1497 459 333 37 15 chr13 119541262 119541396 -742916 + B1F SINE Alu 13 149 0 4 1497 261 288 131 73 chr13 119542030 119542221 -742091 - MER3 DNA MER1_type 0 209 8 4 1497 951 286 76 29 chr13 119542308 119542650 -741662 + MTD LTR MaLR 1 358 -61 4 1497 233 341 170 40 chr13 119542784 119543154 -741158 - L2 LINE L2 -906 2513 2096 4 1497 974 82 0 82 chr13 119543704 119543850 -740462 + B1_Mus1 SINE Alu 2 135 -13 4 1497 1047 88 0 0 chr13 119543851 119543999 -740313 + (GAAA)n Simple_repeat Simple_repeat 1 148 0 4 1497 307 288 43 0 chr13 119544025 119544123 -740189 - ID_B1 SINE B4 -39 185 88 4 1497 414 0 0 0 chr13 119544684 119544730 -739582 + (TG)n Simple_repeat Simple_repeat 1 46 0 4 1497 483 18 0 0 chr13 119545654 119545710 -738602 + (CA)n Simple_repeat Simple_repeat 1 56 0 5 1497 258 246 53 40 chr13 119546434 119546510 -737802 + ID_B1 SINE B4 74 150 -74 5 1497 216 188 27 55 chr13 119546553 119546626 -737686 + A-rich Low_complexity Low_complexity 2 72 0 5 1497 521 195 16 39 chr13 119546657 119546785 -737527 - Lx7 LINE L1 -279 7417 7293 5 1497 354 297 22 0 chr13 119547256 119547347 -736965 - B1F1 SINE Alu -54 95 3 5 1497 540 0 0 0 chr13 119549155 119549215 -735097 + (GAAA)n Simple_repeat Simple_repeat 2 61 0 5 1497 243 0 0 0 chr13 119549215 119549241 -735071 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 5 1497 21 71 0 0 chr13 119550491 119550533 -733779 + AT_rich Low_complexity Low_complexity 1 42 0 5 1497 230 226 38 0 chr13 119550768 119550874 -733438 + (TA)n Simple_repeat Simple_repeat 1 110 0 5 1497 180 111 0 0 chr13 119550873 119550900 -733412 + (GA)n Simple_repeat Simple_repeat 2 28 0 5 1497 297 343 26 59 chr13 119552229 119552381 -731931 - MIR3 SINE MIR -3 205 59 6 1497 200 103 51 0 chr13 119552559 119552598 -731714 + T-rich Low_complexity Low_complexity 4 44 0 6 1497 27 0 0 0 chr13 119553640 119553667 -730645 + AT_rich Low_complexity Low_complexity 1 27 0 6 1497 492 99 0 0 chr13 119556028 119556099 -728213 + (GA)n Simple_repeat Simple_repeat 1 71 0 6 1497 303 191 0 0 chr13 119557007 119557075 -727237 + T-rich Low_complexity Low_complexity 1 68 0 6 1497 433 178 10 0 chr13 119557574 119557675 -726637 - Lx9 LINE L1 -7 7637 7536 6 1497 225 0 0 0 chr13 119557711 119557736 -726576 + (CA)n Simple_repeat Simple_repeat 1 25 0 6 1497 498 198 62 23 chr13 119557736 119557865 -726447 - Lx9 LINE L1 -128 7516 7383 6 1497 230 290 0 0 chr13 119558199 119558261 -726051 - ID4_ SINE ID -19 64 3 6 1497 405 0 0 0 chr13 119558408 119558453 -725859 + (TA)n Simple_repeat Simple_repeat 2 46 0 6 1497 236 303 140 35 chr13 119560378 119560549 -723763 + MIR3 SINE MIR 18 206 -2 6 1497 195 42 0 0 chr13 119560604 119560628 -723684 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 7 1497 1966 89 7 4 chr13 119561475 119561756 -722556 + Lx LINE L1 6373 6654 0 7 1497 839 287 69 60 chr13 119561804 119562152 -722160 + MTE2a LTR MaLR 29 379 0 7 1497 769 156 0 0 chr13 119562236 119562358 -721954 - Lx2 LINE L1 -157 6840 6719 7 1497 238 86 0 0 chr13 119562354 119562389 -721923 - Lx2 LINE L1 -525 6129 6095 7 1497 390 91 0 0 chr13 119562536 119562591 -721721 + (TG)n Simple_repeat Simple_repeat 2 56 0 7 1497 272 301 0 14 chr13 119562593 119562667 -721645 - ID4 SINE ID -9 74 2 7 1497 486 234 361 7 chr13 119563330 119563488 -720824 - B3 SINE B2 -2 214 1 7 1497 272 263 168 0 chr13 119563835 119563930 -720382 + MER5A DNA MER1_type 77 187 -2 7 1497 183 114 0 0 chr13 119564255 119564290 -720022 + (A)n Simple_repeat Simple_repeat 1 35 0 7 1497 440 292 12 35 chr13 119564878 119565056 -719256 - MLT1A1 LTR MaLR 0 408 196 7 1497 289 159 79 0 chr13 119566307 119566370 -717942 - L1MC4a LINE L1 -19 7863 7796 8 1497 1242 85 0 0 chr13 119566539 119566750 -717562 + (TCTA)n Simple_repeat Simple_repeat 1 211 0 8 1497 1195 55 7 0 chr13 119567317 119567463 -716849 - B1_Mus2 SINE Alu 0 147 1 8 1497 339 44 0 0 chr13 119567498 119567543 -716769 + (T)n Simple_repeat Simple_repeat 1 45 0 8 1497 3166 133 81 121 chr13 119568010 119568739 -715573 - RMER6A LTR ERVK 0 756 57 8 1497 256 375 48 29 chr13 119569242 119569448 -714864 - MIRb SINE MIR -40 228 19 8 1497 182 236 71 18 chr13 119569625 119569681 -714631 + L2 LINE L2 560 618 -2801 8 1497 372 315 18 18 chr13 119571321 119571431 -712881 + PB1D10 SINE Alu 8 117 0 8 1497 361 343 100 6 chr13 119571962 119572132 -712180 - MER5A DNA MER1_type 0 189 4 8 1497 296 283 22 131 chr13 119572387 119572570 -711742 + RSINE1 SINE B4 3 165 0 8 1497 225 65 0 0 chr13 119572583 119572614 -711698 + (CCA)n Simple_repeat Simple_repeat 1 31 0 9 1497 711 278 14 19 chr13 119572669 119572878 -711434 + B3 SINE B2 3 210 -6 9 1497 186 71 0 0 chr13 119572891 119572919 -711393 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 9 1497 1997 322 82 22 chr13 119574164 119575146 -709166 - Lx8 LINE L1 0 7473 6433 9 1497 278 0 54 0 chr13 119575409 119575446 -708866 + (TCTCTG)n Simple_repeat Simple_repeat 5 43 0 9 1497 192 40 0 0 chr13 119575447 119575472 -708840 + (TG)n Simple_repeat Simple_repeat 1 25 0 9 1497 23 92 0 0 chr13 119575729 119575794 -708518 + AT_rich Low_complexity Low_complexity 1 65 0 9 1497 780 275 19 23 chr13 119576004 119576220 -708092 + B3 SINE B2 2 216 0 9 1497 252 286 141 12 chr13 119576622 119576707 -707605 - ID_B1 SINE B4 -10 214 119 9 1497 3951 122 19 3 chr13 119576720 119577310 -707002 - MT2B LTR ERVL -2 599 1 9 1497 765 33 0 0 chr13 119578847 119578939 -705373 + (TC)n Simple_repeat Simple_repeat 1 92 0 1 1497 22 0 0 0 chr13 119579945 119579967 -704345 + AT_rich Low_complexity Low_complexity 1 22 0 1 1497 26 30 0 0 chr13 119580251 119580284 -704028 + AT_rich Low_complexity Low_complexity 1 33 0 1 1497 412 107 13 26 chr13 119580944 119581021 -703291 + (TTTTC)n Simple_repeat Simple_repeat 4 79 0 1 1497 374 159 0 24 chr13 119581601 119581685 -702627 + (CATA)n Simple_repeat Simple_repeat 2 83 0 1 1497 200 257 0 28 chr13 119582185 119582257 -702055 + A-rich Low_complexity Low_complexity 3 72 0 1 1497 361 274 95 0 chr13 119584559 119584654 -699658 - RMER15 LTR ERVL -20 555 452 1 1497 284 303 29 94 chr13 119584765 119584936 -699376 - RMER15 LTR ERVL -415 160 1 1 1497 222 173 26 13 chr13 119585055 119585131 -699181 + (TA)n Simple_repeat Simple_repeat 2 78 0 1 1497 486 0 0 0 chr13 119585336 119585390 -698922 + (CA)n Simple_repeat Simple_repeat 1 54 0 1 1497 2469 308 47 20 chr13 119585424 119586324 -697988 - Lx8 LINE L1 -248 7225 6302 1 1497 24 0 0 0 chr13 119586356 119586380 -697932 + AT_rich Low_complexity Low_complexity 1 24 0 1 1497 25 0 0 0 chr13 119586442 119586467 -697845 + AT_rich Low_complexity Low_complexity 1 25 0 1 1497 503 16 16 0 chr13 119586630 119586694 -697618 + (TAG)n Simple_repeat Simple_repeat 1 65 0 1 1497 347 268 88 40 chr13 119587805 119587953 -696359 - MLT1A1 LTR MaLR -6 402 248 1 1497 318 298 41 16 chr13 119588031 119588154 -696158 - MLT1A1 LTR MaLR -282 126 1 1 1497 1569 52 0 10 chr13 119588226 119588421 -695891 - B2_Mm1t SINE B2 0 193 1 1 1497 269 333 14 0 chr13 119589381 119589450 -694862 - ID4_ SINE ID -2 81 12 1 1497 605 293 58 36 chr13 119590696 119590919 -693393 - ORR1E LTR MaLR -131 228 1 1 1497 231 114 0 0 chr13 119591209 119591244 -693068 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 1 1497 745 295 33 24 chr13 119592259 119592596 -691716 - RLTR15 LTR ERVK -16 343 4 1 1497 627 359 55 46 chr13 119592598 119593051 -691261 - MT2A LTR ERVL -75 458 2 1 1497 226 226 0 16 chr13 119593133 119593196 -691116 - Lx9 LINE L1 -15 7629 7568 1 1497 320 287 58 112 chr13 119593489 119593602 -690710 - L1MD1 LINE L1 -1 6241 6128 1 1497 1459 119 4 12 chr13 119593602 119593849 -690463 + Lx LINE L1 6396 6640 -14 1 1497 320 287 58 112 chr13 119593849 119594100 -690212 - L1MD1 LINE L1 -115 6127 5897 1 1497 219 215 0 71 chr13 119594105 119594175 -690137 + GA-rich Low_complexity Low_complexity 4 68 0 1 1497 219 226 75 55 chr13 119594731 119594848 -689464 + L2a LINE L2 3239 3370 -5 1 1497 279 247 120 70 chr13 119597106 119597306 -687006 + Charlie7 DNA MER1_type 332 541 -2071 1 1497 650 342 75 0 chr13 119597365 119597564 -686748 - B4A SINE B4 -71 221 8 1 1497 667 317 39 91 chr13 119597997 119598327 -685985 - ORR1E LTR MaLR -41 318 6 1 1497 3527 318 97 24 chr13 119598309 119599751 -684561 - ORR1E-int LTR MaLR -30 1550 3 1 1497 546 249 174 21 chr13 119599751 119600049 -684263 - ORR1E LTR MaLR -11 368 1 1 1497 6846 48 23 0 chr13 119601176 119602011 -682301 + L1_Mus1 LINE L1 5712 6565 -2 1 1497 2417 224 36 2 chr13 119602209 119602702 -681610 - Lx5 LINE L1 -497 6553 6044 1 1497 3736 169 11 40 chr13 119602716 119603328 -680984 + Lx5 LINE L1 5168 5784 -93 1 1497 852 173 43 11 chr13 119603328 119603515 -680797 + Lx5 LINE L1 6855 7047 -3 1 1497 3736 155 11 60 chr13 119603515 119603769 -680543 + Lx5 LINE L1 5785 6018 -1032 1 1497 1122 52 0 0 chr13 119604379 119604513 -679799 + B1_Mus2 SINE Alu 2 135 -12 1 1497 330 26 0 0 chr13 119604514 119604553 -679759 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1 1497 297 149 45 22 chr13 119604836 119604925 -679387 + (TCTCTG)n Simple_repeat Simple_repeat 6 96 0 1 1497 331 146 12 24 chr13 119604928 119605012 -679300 + (TATG)n Simple_repeat Simple_repeat 4 86 0 1 1497 708 298 20 56 chr13 119605023 119605325 -678987 - B4A SINE B4 0 292 2 1 1497 190 349 35 0 chr13 119605450 119605536 -678776 + L2a LINE L2 3302 3390 -36 1 1497 6016 65 9 20 chr13 119605599 119606401 -677911 + L1Md_F2 LINE L1 5790 6582 0 1 1497 281 277 58 117 chr13 119606853 119607041 -677271 - MTEa LTR MaLR -2 377 201 1 1497 592 70 15 59 chr13 119607041 119607177 -677135 + (CAGAGA)n Simple_repeat Simple_repeat 3 132 0 1 1497 21 0 0 0 chr13 119608235 119608256 -676056 + AT_rich Low_complexity Low_complexity 1 21 0 1 1497 678 48 29 0 chr13 119609275 119609378 -674934 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 1 1497 1431 50 0 0 chr13 119609431 119609611 -674701 + (GA)n Simple_repeat Simple_repeat 1 180 0 1 1497 271 303 62 68 chr13 119610361 119610669 -673643 - L1MD LINE L1 -1815 4331 4026 1 1497 759 185 180 0 chr13 119610714 119610892 -673420 + Lx9 LINE L1 7230 7439 -205 1 1497 524 358 19 73 chr13 119610906 119611111 -673201 - B3A SINE B2 -2 196 3 1 1497 1424 138 14 84 chr13 119611952 119612236 -672076 + ORR1A4 LTR MaLR 1 264 -65 1 1497 441 351 109 0 chr13 119612873 119613112 -671200 - Lx8 LINE L1 -679 6794 6530 1 1497 1212 101 0 0 chr13 119613347 119613525 -670787 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1 1497 211 200 0 0 chr13 119613525 119613560 -670752 + polypyrimidine Low_complexity Low_complexity 3 37 0 1 1497 335 355 13 62 chr13 119614563 119614788 -669524 + ID_B1 SINE B4 3 216 -8 1 1497 336 102 0 0 chr13 119614884 119614933 -669379 + (TTTTC)n Simple_repeat Simple_repeat 1 49 0 1 1497 1888 131 102 3 chr13 119615192 119615507 -668805 + ORR1A1 LTR MaLR 1 346 0 1 1497 686 346 86 59 chr13 119616657 119616806 -667506 - MLT1F LTR MaLR -69 479 347 1 1497 551 15 15 0 chr13 119616806 119616874 -667438 + (TG)n Simple_repeat Simple_repeat 1 69 0 1 1497 686 346 86 59 chr13 119616874 119617166 -667146 - MLT1F LTR MaLR -202 346 27 1 1497 226 313 24 24 chr13 119617600 119617685 -666627 + MTE2a LTR MaLR 248 332 -47 1 1497 380 345 8 63 chr13 119617932 119618059 -666253 + B4A SINE B4 5 124 -168 1 1497 459 0 0 0 chr13 119618059 119618110 -666202 + (CA)n Simple_repeat Simple_repeat 1 51 0 1 1497 533 315 16 43 chr13 119618162 119618348 -665964 + B4A SINE B4 2 182 -110 1 1497 183 156 0 0 chr13 119618788 119618820 -665492 + (ATTG)n Simple_repeat Simple_repeat 2 33 0 1 1497 231 300 0 14 chr13 119621374 119621445 -662867 + ID4_ SINE ID 2 71 -12 1 1497 956 67 0 13 chr13 119621452 119621603 -662709 + (CAGAGA)n Simple_repeat Simple_repeat 2 150 0 1 1497 1261 227 54 3 chr13 119621849 119622180 -662132 - Lx9 LINE L1 -258 7386 7039 1 1497 297 0 0 0 chr13 119622190 119622223 -662089 + (TG)n Simple_repeat Simple_repeat 2 34 0 1 1497 247 215 47 0 chr13 119622228 119622335 -661977 + Lx9 LINE L1 7527 7638 -6 1 1497 215 246 42 42 chr13 119623066 119623138 -661174 + MIRc SINE MIR 63 134 -134 1 1497 301 149 30 0 chr13 119623693 119623760 -660552 + (TA)n Simple_repeat Simple_repeat 2 70 0 1 1497 260 356 54 20 chr13 119623924 119624073 -660239 + L2b LINE L2 3222 3375 0 1 1497 527 81 12 0 chr13 119624147 119624233 -660079 + (TG)n Simple_repeat Simple_repeat 2 88 0 1 1497 2586 281 81 46 chr13 119624487 119624695 -659617 - Lx9 LINE L1 -15 7629 7419 1 1497 393 22 0 0 chr13 119624695 119624741 -659571 + (TG)n Simple_repeat Simple_repeat 1 46 0 1 1497 2586 281 81 46 chr13 119624741 119625687 -658625 - Lx9 LINE L1 -226 7418 6435 1 1497 240 35 0 0 chr13 119625752 119625781 -658531 + (CA)n Simple_repeat Simple_repeat 2 30 0 1 1497 630 68 0 0 chr13 119625781 119625868 -658444 + (GA)n Simple_repeat Simple_repeat 2 89 0 1 1497 1512 252 52 67 chr13 119625999 119626721 -657591 - Lx9 LINE L1 -1597 6047 5291 1 1497 1825 138 100 0 chr13 119626721 119626826 -657486 - Lx3A LINE L1 0 6981 6877 1 1497 437 0 19 0 chr13 119626826 119626879 -657433 + (CA)n Simple_repeat Simple_repeat 2 55 0 1 1497 1825 138 100 0 chr13 119626879 119627092 -657220 - Lx3A LINE L1 -105 6876 6632 1 1497 1512 239 55 75 chr13 119627092 119627219 -657093 - Lx9 LINE L1 -557 5290 5167 1 1497 1604 237 69 2 chr13 119627219 119627612 -656700 - MTD LTR MaLR 0 419 1 1 1497 677 199 37 37 chr13 119627612 119627800 -656512 - MTD-int LTR MaLR 0 1258 1071 1 1497 3221 29 3 0 chr13 119627800 119628178 -656134 + L1Md_F3 LINE L1 6192 6570 -14 1 1497 2097 90 30 0 chr13 119628767 119629066 -655246 + L1_Mus1 LINE L1 6259 6566 -1 1 1497 663 78 0 0 chr13 119629066 119629156 -655156 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 1 1497 181 214 105 18 chr13 119629525 119629582 -654730 - L2c LINE L2 -77 3310 3249 1 1497 556 328 48 43 chr13 119629885 119630177 -654135 - L1M3 LINE L1 -1771 4372 4066 1 1497 1448 65 0 5 chr13 119630177 119630364 -653948 - B2_Mm2 SINE B2 -8 187 2 1 1497 556 331 27 30 chr13 119630364 119630466 -653846 - L1M3 LINE L1 -2075 4065 3973 1 1497 309 280 174 0 chr13 119630717 119630849 -653463 + HAL1-3A_ME LINE L1 2286 2440 -418 1 1497 505 111 22 11 chr13 119630850 119630941 -653371 + (GGAA)n Simple_repeat Simple_repeat 1 92 0 1 1497 207 0 0 0 chr13 119630941 119630964 -653348 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 1 1497 229 222 0 18 chr13 119630981 119631036 -653276 + A-rich Low_complexity Low_complexity 5 58 0 1 1497 317 329 0 0 chr13 119631040 119631113 -653199 + ID4 SINE ID 5 77 -6 1 1497 1598 120 25 7 chr13 119631218 119631492 -652820 - BGLII_Mus LTR ERVK -73 349 1 1 1497 495 239 18 6 chr13 119631493 119631661 -652651 + L1_Mur1 LINE L1 4487 4656 -1230 1 1497 7247 91 18 12 chr13 119632498 119634485 -649827 - L1VL2 LINE L1 -1575 2040 56 1 1497 394 325 64 4 chr13 119634541 119634608 -649704 + L1MA4A LINE L1 4592 4673 -1470 1 1497 225 0 0 0 chr13 119634608 119634633 -649679 + (GA)n Simple_repeat Simple_repeat 1 25 0 1 1497 394 325 64 4 chr13 119634633 119634815 -649497 + L1MA4A LINE L1 4674 4856 -1287 1 1497 531 260 44 58 chr13 119634933 119635207 -649105 + L1MA4A LINE L1 5662 5931 -372 1 1497 1761 223 79 3 chr13 119635507 119635876 -648436 - MTD LTR MaLR 0 419 23 1 1497 419 194 11 0 chr13 119636015 119636108 -648204 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 1 1497 21 36 0 0 chr13 119636541 119636569 -647743 + AT_rich Low_complexity Low_complexity 1 28 0 1 1497 1348 237 22 39 chr13 119636878 119637287 -647025 + Lx7 LINE L1 6988 7389 -307 1 1497 279 0 0 0 chr13 119637307 119637338 -646974 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 1 1497 25 51 0 0 chr13 119637463 119637502 -646810 + AT_rich Low_complexity Low_complexity 1 39 0 1 1497 621 120 102 22 chr13 119638146 119638275 -646037 + B1_Mur4 SINE Alu 1 120 -30 1 1497 289 332 11 11 chr13 119639645 119639772 -644540 - MIR SINE MIR -67 209 77 2 1497 200 122 0 24 chr13 119640076 119640118 -644194 + (TA)n Simple_repeat Simple_repeat 1 41 0 2 1497 702 357 111 66 chr13 119640422 119640925 -643387 - MER44B DNA MER2_type -14 536 11 2 1497 38 22 0 0 chr13 119641578 119641623 -642689 + AT_rich Low_complexity Low_complexity 1 45 0 2 1497 921 228 147 25 chr13 119642330 119642650 -641662 - Lx2B LINE L1 0 7000 6642 2 1497 414 0 0 0 chr13 119643243 119643289 -641023 + (TTTTG)n Simple_repeat Simple_repeat 2 47 0 2 1497 1168 50 0 14 chr13 119643289 119643425 -640887 - B1_Mus2 SINE Alu -10 137 2 2 1497 388 356 145 8 chr13 119643585 119643826 -640486 + MLT2B1 LTR ERVL 239 512 -8 2 1497 202 133 21 43 chr13 119644140 119644187 -640125 + (TATAA)n Simple_repeat Simple_repeat 4 49 0 2 1497 218 211 0 0 chr13 119644556 119644608 -639704 + (TATG)n Simple_repeat Simple_repeat 1 52 0 2 1497 225 195 45 68 chr13 119644706 119644794 -639518 + MER112 DNA MER1_type 126 211 -50 2 1497 467 260 103 37 chr13 119645932 119646068 -638244 + RSINE1 SINE B4 21 165 0 2 1497 406 306 27 0 chr13 119646162 119646273 -638039 + PB1D9 SINE Alu 2 115 -5 2 1497 319 254 0 0 chr13 119646567 119646634 -637678 + B1_Mur1 SINE Alu 76 142 -7 2 1497 697 212 34 50 chr13 119647646 119647825 -636487 + Lx6 LINE L1 291 466 -7262 2 1497 1326 96 0 3 chr13 119647839 119648489 -635823 + (CA)n Simple_repeat Simple_repeat 1 647 0 2 1497 3718 187 59 48 chr13 119648510 119649841 -634471 + Lx6 LINE L1 4874 6239 -1457 2 1497 2984 103 27 27 chr13 119649842 119650319 -633993 + RLTR44C LTR ERVK 1 477 -25 2 1497 576 117 11 0 chr13 119650347 119650441 -633871 + RLTR44-int LTR ERVK 52 146 -2666 2 1497 671 159 15 36 chr13 119650487 119650624 -633688 + RLTR44-int LTR ERVK 811 944 -1868 2 1497 3324 86 2 2 chr13 119650649 119651106 -633206 + RLTR44-int LTR ERVK 876 1332 -1480 2 1497 486 292 28 47 chr13 119651185 119651440 -632872 + IAPEz-int LTR ERVK 3423 3672 -2809 2 1497 3674 64 0 2 chr13 119651465 119651947 -632365 + RLTR44-int LTR ERVK 2244 2724 -88 2 1497 4008 229 87 34 chr13 119651947 119653072 -631240 + Lx6 LINE L1 6226 7410 -50 2 1497 1065 250 54 17 chr13 119653086 119653383 -630929 - Lx6 LINE L1 -28 7432 7125 2 1497 954 242 24 0 chr13 119653619 119653830 -630482 - B3 SINE B2 0 216 1 2 1497 36 53 0 0 chr13 119654026 119654083 -630229 + AT_rich Low_complexity Low_complexity 1 57 0 2 1497 2249 82 22 9 chr13 119654111 119654432 -629880 + IAPLTR2b LTR ERVK 1 325 -2 2 1497 325 306 4 145 chr13 119654606 119654847 -629465 - Lx7 LINE L1 -395 7301 7095 2 1497 600 255 24 21 chr13 119655040 119655194 -629118 - B1F SINE Alu -1 148 1 2 1497 181 139 27 27 chr13 119655332 119655369 -628943 + MER5B DNA MER1_type 92 128 -50 2 1497 21 0 0 0 chr13 119655380 119655401 -628911 + AT_rich Low_complexity Low_complexity 1 21 0 2 1497 1149 68 0 0 chr13 119656220 119656366 -627946 + B1_Mus1 SINE Alu 1 146 -2 2 1497 270 115 25 25 chr13 119656366 119656446 -627866 + (CAAA)n Simple_repeat Simple_repeat 1 80 0 2 1497 3055 61 2 10 chr13 119656479 119656874 -627438 + MTA_Mm LTR MaLR 2 393 -3 2 1497 539 286 26 31 chr13 119656896 119657091 -627221 - B3A SINE B2 -3 195 2 2 1497 2780 187 61 24 chr13 119657254 119657913 -626399 - Lx5 LINE L1 -8 7042 6315 2 1497 1003 271 80 37 chr13 119658055 119658457 -625855 - Lx8 LINE L1 -174 7299 6881 2 1497 1452 209 42 10 chr13 119658492 119658801 -625511 - MTC LTR MaLR -54 367 49 2 1497 456 337 95 0 chr13 119659246 119659415 -624897 + MLT1E1A LTR MaLR 494 678 -2 2 1497 213 374 30 64 chr13 119659771 119659974 -624338 + L2 LINE L2 1810 2005 -1414 2 1497 920 344 83 14 chr13 119660562 119661066 -623246 + Lx8 LINE L1 6767 7305 -168 2 1497 3504 128 64 28 chr13 119661933 119662513 -621799 - MT2B LTR ERVL 0 601 1 2 1497 39 50 0 0 chr13 119662561 119662621 -621691 + AT_rich Low_complexity Low_complexity 1 60 0 2 1497 1906 299 113 16 chr13 119662621 119663649 -620663 - Lx9 LINE L1 -118 7526 6400 2 1497 411 92 0 0 chr13 119663715 119663780 -620532 + (CA)n Simple_repeat Simple_repeat 2 66 0 2 1497 285 349 95 90 chr13 119663921 119664105 -620207 - ORR1D2 LTR MaLR -21 349 164 2 1497 234 62 0 0 chr13 119664105 119664137 -620175 + (CAGA)n Simple_repeat Simple_repeat 3 34 0 2 1497 285 349 95 90 chr13 119664137 119664298 -620014 - ORR1D2 LTR MaLR -207 163 3 2 1497 586 328 35 60 chr13 119664298 119664614 -619698 + MLT1A1 LTR MaLR 60 408 0 2 187 34730 27 1 6 chr13 119664827 119670894 -613418 - L1Md_T LINE L1 0 6582 552 2 1498 422 292 168 40 chr13 119671148 119671973 -612339 + L1ME2 LINE L1 5401 6360 -84 2 1498 1150 62 7 7 chr13 119672366 119672513 -611799 + B1_Mm SINE Alu 1 147 0 2 1498 597 94 0 0 chr13 119672513 119672598 -611714 + (GGAA)n Simple_repeat Simple_repeat 4 88 0 2 1498 468 213 0 0 chr13 119673003 119673097 -611215 - Lx2B LINE L1 -379 6621 6528 2 1498 275 166 111 28 chr13 119673097 119673180 -611132 + B1_Mur4 SINE Alu 55 140 -10 2 1498 180 0 0 0 chr13 119673181 119673201 -611111 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 2 1498 340 243 9 9 chr13 119673206 119673318 -610994 + (TAGA)n Simple_repeat Simple_repeat 4 115 0 2 1498 326 354 22 30 chr13 119673427 119673561 -610751 + ID_B1 SINE B4 76 208 -16 2 1498 260 345 43 22 chr13 119673566 119673658 -610654 - PB1D10 SINE Alu -15 102 9 2 1498 1137 76 0 0 chr13 119674090 119674235 -610077 + B1_Mm SINE Alu 1 145 -2 2 1498 388 0 0 37 chr13 119674375 119674429 -609883 + (TAA)n Simple_repeat Simple_repeat 2 53 0 2 1498 219 351 77 26 chr13 119676360 119676515 -607797 + L2a LINE L2 3263 3425 -1 2 1498 792 0 0 0 chr13 119676926 119677014 -607298 + (GAAA)n Simple_repeat Simple_repeat 4 91 0 2 1498 1604 228 55 15 chr13 119678095 119678496 -605816 - MTD LTR MaLR -2 417 1 2 1498 3835 110 5 23 chr13 119678913 119679488 -604824 + Lx LINE L1 6082 6646 -8 2 1498 421 287 9 109 chr13 119680469 119680680 -603632 - B3A SINE B2 -7 191 2 2 1498 477 317 72 88 chr13 119680902 119681222 -603090 - Lx7 LINE L1 -2 7471 7143 2 1498 387 0 0 0 chr13 119683620 119683663 -600649 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2 1498 21 0 0 0 chr13 119684264 119684285 -600027 + AT_rich Low_complexity Low_complexity 1 21 0 2 1498 420 20 0 0 chr13 119684681 119684730 -599582 + (TTGG)n Simple_repeat Simple_repeat 2 50 0 2 1498 585 0 0 0 chr13 119684871 119684936 -599376 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 2 1498 270 0 0 0 chr13 119685955 119685985 -598327 + (TA)n Simple_repeat Simple_repeat 2 31 0 2 1498 932 235 118 67 chr13 119686495 119686841 -597471 + ORR1D1 LTR MaLR 1 364 -10 2 1498 248 320 117 13 chr13 119687082 119687207 -597105 - B1F1 SINE Alu 0 149 1 2 1498 399 41 0 0 chr13 119687941 119687990 -596322 + (CA)n Simple_repeat Simple_repeat 2 50 0 2 1498 414 0 0 0 chr13 119688151 119688197 -596115 + (TG)n Simple_repeat Simple_repeat 2 47 0 2 1498 259 196 125 0 chr13 119688199 119688265 -596047 + Lx9 LINE L1 7517 7588 -56 2 1498 621 0 0 0 chr13 119688265 119688334 -595978 + (GGAA)n Simple_repeat Simple_repeat 3 71 0 2 1498 259 196 125 0 chr13 119688334 119688379 -595933 + Lx9 LINE L1 7589 7641 -3 2 1498 4839 114 46 39 chr13 119688380 119689182 -595130 + Lx2 LINE L1 6187 6994 -3 2 1498 409 288 69 21 chr13 119689274 119689462 -594850 + L1M4b LINE L1 1221 1417 -5917 2 1498 260 239 108 11 chr13 119689746 119689839 -594473 + L1M4b LINE L1 5207 5308 -1698 2 1498 909 341 91 23 chr13 119690164 119690602 -593710 + MER70B LTR ERVL 88 555 -23 2 1498 355 304 73 113 chr13 119690657 119690931 -593381 + L1M4b LINE L1 5392 5654 -1352 2 1498 236 273 0 135 chr13 119690952 119691041 -593271 + BC1_Mm scRNA scRNA 26 102 -50 2 1498 291 298 19 19 chr13 119691084 119691190 -593122 + L1M4b LINE L1 5749 5854 -1152 2 1498 568 253 102 17 chr13 119691346 119691523 -592789 + B3A SINE B2 2 193 -5 2 1498 259 297 20 0 chr13 119691545 119691646 -592666 + L1M4b LINE L1 5872 5974 -1032 2 1498 240 172 0 0 chr13 119691662 119691720 -592592 + (CA)n Simple_repeat Simple_repeat 1 58 0 2 1498 224 176 15 0 chr13 119691837 119691905 -592407 + (CA)n Simple_repeat Simple_repeat 1 69 0 2 1498 39219 32 0 7 chr13 119691947 119698097 -586215 - L1Md_T LINE L1 0 6582 481 2 1498 638 354 57 22 chr13 119699194 119699601 -584711 + ERVL-E-int LTR ERVL 3085 3505 -2162 2 1498 337 356 0 0 chr13 119699638 119699728 -584584 + B1F SINE Alu 22 111 -38 2 1498 278 275 10 117 chr13 119700033 119700136 -584176 + BC1_Mm scRNA scRNA 14 105 -47 2 1498 22 80 0 0 chr13 119700858 119700908 -583404 + AT_rich Low_complexity Low_complexity 1 50 0 2 1498 485 368 89 46 chr13 119701009 119701359 -582953 + LTR82A LTR ERVL 432 796 -76 2 1498 947 262 18 73 chr13 119701828 119702170 -582142 + RLTR11A2 LTR ERVK 7 329 -198 2 1498 2292 163 29 26 chr13 119702165 119702618 -581694 - RLTR31_Mm LTR ERVK -107 454 1 2 1498 689 208 63 6 chr13 119702618 119702791 -581521 + RLTR11A2 LTR ERVK 345 527 0 2 1498 922 246 19 24 chr13 119702791 119703003 -581309 + Lx7 LINE L1 7026 7236 -460 2 1498 1418 39 0 11 chr13 119703042 119703224 -581088 + (TTTTC)n Simple_repeat Simple_repeat 1 180 0 2 1498 1288 40 0 0 chr13 119703238 119703390 -580922 + L1Md_F2 LINE L1 6138 6289 -293 2 1498 390 240 31 23 chr13 119703618 119703761 -580551 + Lx7 LINE L1 7563 7670 -26 2 1498 3172 220 22 28 chr13 119704372 119705239 -579073 - Lx4B LINE L1 -23 6977 6094 2 1498 1865 254 27 25 chr13 119705263 119705748 -578564 + RMER19C LTR ERVK 126 611 0 2 1498 2803 182 23 6 chr13 119705749 119706481 -577831 - Lx4B LINE L1 -960 6098 5359 2 1498 34575 74 6 10 chr13 119706478 119712510 -571802 - L1Md_F2 LINE L1 0 6582 590 2 1498 15614 154 50 12 chr13 119712503 119715486 -568826 - Lx4B LINE L1 -494 5383 2290 2 1498 23642 123 21 10 chr13 119715501 119718654 -565658 + L1Md_F LINE L1 380 3592 -2291 2 1498 2788 58 3 3 chr13 119718654 119719000 -565312 - ORR1A1 LTR MaLR 0 346 1 2 1498 23642 107 9 11 chr13 119719000 119719612 -564700 + L1Md_F LINE L1 3593 4203 -1680 2 1498 1054 122 0 0 chr13 119719612 119719760 -564552 + B1_Mus1 SINE Alu 1 148 0 2 1498 23642 107 9 11 chr13 119719760 119720392 -563920 + L1Md_F LINE L1 4204 4813 -1070 2 1498 6860 103 4 1 chr13 119720389 119721365 -562947 - L1_Mm LINE L1 -133 5750 4772 2 1498 408 40 0 0 chr13 119721717 119721767 -562545 + (CA)n Simple_repeat Simple_repeat 2 51 0 2 1498 3340 67 54 0 chr13 119722168 119722628 -561684 + L1_Mus3 LINE L1 6137 6621 -17 2 1498 380 116 47 0 chr13 119722628 119722714 -561598 + (TA)n Simple_repeat Simple_repeat 2 91 0 2 1498 816 11 0 0 chr13 119722714 119722807 -561505 + (GA)n Simple_repeat Simple_repeat 2 94 0 3 1498 285 301 118 66 chr13 119723461 119723649 -560663 - MIR SINE MIR -46 222 31 3 1498 851 169 208 42 chr13 119723702 119723894 -560418 + URR1B DNA MER1_type 1 224 -1 3 1498 298 312 10 20 chr13 119724065 119724163 -560149 - RMER15 LTR ERVL -108 467 371 3 1498 1420 83 4 316 chr13 119724408 119724921 -559391 - IAPLTR2_Mm LTR ERVK 0 475 123 3 1498 923 19 0 0 chr13 119724921 119725026 -559286 - IAPEz-int LTR ERVK -103 6378 6274 3 1498 2375 112 131 0 chr13 119725048 119725468 -558844 - IAPLTR2_Mm LTR ERVK 0 475 1 3 1498 272 331 192 6 chr13 119725471 119725632 -558680 - Lx8 LINE L1 -446 7027 6837 3 1498 1862 154 9 59 chr13 119725681 119726019 -558293 + ORR1A4 LTR MaLR 1 321 -8 3 1498 274 341 11 32 chr13 119726202 119726296 -558016 - ID_B1 SINE B4 -55 169 78 3 1498 2273 176 79 76 chr13 119726788 119727342 -556970 - Lx4B LINE L1 -4 7054 6499 3 1498 2312 181 44 5 chr13 119727336 119727769 -556543 - L1_Mur2 LINE L1 -7 5870 5421 3 1498 3123 60 5 2 chr13 119727946 119728347 -555965 - L1_Mus1 LINE L1 -1 6566 6165 3 1498 231 331 104 30 chr13 119728369 119728503 -555809 + ID_B1 SINE B4 79 222 -2 3 1498 37 0 0 0 chr13 119728515 119728552 -555760 + AT_rich Low_complexity Low_complexity 1 37 0 3 1498 668 133 8 0 chr13 119728573 119728693 -555619 + (TG)n Simple_repeat Simple_repeat 2 122 0 3 1498 234 333 64 0 chr13 119728723 119728864 -555448 + L1ME3 LINE L1 5381 5530 -649 3 1498 284 258 65 0 chr13 119729060 119729153 -555159 + L1ME3 LINE L1 5832 5930 -232 3 1498 853 122 7 28 chr13 119731277 119731420 -552892 - URR1B DNA MER1_type 0 225 86 3 1498 425 167 35 28 chr13 119731790 119731932 -552380 + RMER17B LTR ERVK 310 452 -506 3 1498 4001 73 0 114 chr13 119731936 119732587 -551725 + L1_Mus1 LINE L1 5991 6567 0 3 1498 240 35 0 0 chr13 119732602 119732631 -551681 + (GA)n Simple_repeat Simple_repeat 2 30 0 3 1498 1067 134 6 0 chr13 119732631 119732810 -551502 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3 1498 502 340 18 6 chr13 119732877 119733040 -551272 - MER82 DNA MER2_type -56 597 433 3 1498 693 183 8 0 chr13 119733047 119733178 -551134 - Lx9 LINE L1 -555 7089 6958 3 1498 364 114 0 14 chr13 119733179 119733250 -551062 + Lx9 LINE L1 7574 7643 -1 3 1498 633 292 11 17 chr13 119733471 119733652 -550660 - B3A SINE B2 -18 180 1 3 1498 868 243 58 31 chr13 119733673 119733932 -550380 - MER82 DNA MER2_type -387 266 1 3 1498 25 0 0 0 chr13 119733937 119733962 -550350 + AT_rich Low_complexity Low_complexity 1 25 0 3 1498 280 290 53 0 chr13 119734579 119734710 -549602 + L1MD3 LINE L1 6914 7051 -831 3 1498 772 206 15 0 chr13 119734728 119734864 -549448 + B1_Mur2 SINE Alu 7 144 -5 3 1498 330 336 110 13 chr13 119734888 119735042 -549270 + L1MD3 LINE L1 7104 7272 -610 3 1498 536 297 17 13 chr13 119735045 119735280 -549032 + L1MD3 LINE L1 7752 7987 -8 3 1498 27 96 0 0 chr13 119735714 119735797 -548515 + AT_rich Low_complexity Low_complexity 1 83 0 3 1498 259 224 0 0 chr13 119735822 119735880 -548432 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 3 1498 425 330 96 10 chr13 119735923 119736122 -548190 + B3 SINE B2 1 216 0 3 1498 21 36 0 0 chr13 119736123 119736151 -548161 + AT_rich Low_complexity Low_complexity 1 28 0 3 1498 732 334 63 9 chr13 119736836 119737186 -547126 + LTR40a LTR ERVL 149 517 -2 3 1498 242 0 61 0 chr13 119738177 119738210 -546102 + (TAAAA)n Simple_repeat Simple_repeat 2 36 0 3 1498 682 281 86 10 chr13 119738726 119738924 -545388 + B3 SINE B2 2 214 -2 3 1498 742 242 19 43 chr13 119739028 119739235 -545077 - Lx6 LINE L1 -11 7449 7248 3 1498 33482 70 4 1 chr13 119739672 119744803 -539509 + L1Md_F3 LINE L1 441 5586 -297 3 1498 8224 42 1 1 chr13 119744803 119745801 -538511 + L1Md_F3 LINE L1 5587 6584 0 3 1498 201 39 0 0 chr13 119745821 119745847 -538465 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 3 1498 702 0 0 0 chr13 119745970 119746048 -538264 + (TCTA)n Simple_repeat Simple_repeat 2 79 0 3 1498 269 297 35 8 chr13 119746533 119746692 -537620 - L1M4b LINE L1 -3692 3642 3499 3 1498 829 79 14 0 chr13 119746750 119746890 -537422 + (TC)n Simple_repeat Simple_repeat 1 142 0 3 1498 495 153 223 9 chr13 119746890 119747002 -537310 - B1_Mus2 SINE Alu -11 136 1 3 1498 26 0 0 0 chr13 119747066 119747092 -537220 + AT_rich Low_complexity Low_complexity 1 26 0 3 1498 252 227 81 73 chr13 119747367 119747499 -536813 - RMER17D LTR ERVK -445 444 313 3 1498 1727 112 27 66 chr13 119747499 119747834 -536478 + RLTRETN_Mm LTR ERVK 1 322 0 3 1498 777 40 0 0 chr13 119747841 119747942 -536370 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 3 1498 1137 83 0 0 chr13 119747946 119748126 -536186 + (GA)n Simple_repeat Simple_repeat 1 180 0 3 1498 252 227 81 73 chr13 119748126 119748227 -536085 - RMER17D LTR ERVK -577 312 198 3 1498 428 242 98 8 chr13 119748990 119749123 -535189 - L1M4b LINE L1 -7185 149 5 3 1498 1903 286 86 34 chr13 119749291 119750267 -534045 - Lx8 LINE L1 -1520 5953 4896 3 1498 265 237 0 0 chr13 119750314 119750373 -533939 + RMER15-int LTR ERVL 4529 4587 -412 3 1498 1015 313 61 23 chr13 119750388 119750816 -533496 + Lx8 LINE L1 7025 7468 -5 3 1498 30 0 0 0 chr13 119750816 119750846 -533466 + AT_rich Low_complexity Low_complexity 1 30 0 3 1498 556 229 127 0 chr13 119750953 119751071 -533241 + ETnERV2-int LTR ERVK 7070 7202 -204 3 1498 726 279 78 87 chr13 119751826 119752083 -532229 - Lx8 LINE L1 -1196 6277 6018 3 1498 3605 74 0 2 chr13 119752083 119752560 -531752 - L1_Mus2 LINE L1 -1 6565 6090 3 1498 726 276 136 30 chr13 119752560 119752998 -531314 - Lx8 LINE L1 -1456 6017 5532 3 1498 695 313 9 14 chr13 119753008 119753228 -531084 + Lx8 LINE L1 6276 6494 -979 3 1498 278 363 15 0 chr13 119753327 119753462 -530850 + Lx8 LINE L1 6948 7084 -389 3 1498 228 120 90 0 chr13 119753470 119753570 -530742 + (TA)n Simple_repeat Simple_repeat 1 109 0 3 1498 262 321 34 56 chr13 119753742 119753831 -530481 - B4 SINE B4 0 292 206 3 1498 1157 43 0 0 chr13 119753842 119753980 -530332 - B1_Mus2 SINE Alu -9 138 1 3 1498 1090 343 27 14 chr13 119754004 119754444 -529868 + Lx8 LINE L1 6828 7273 -200 3 1498 3104 148 42 9 chr13 119754731 119755277 -529035 - Lx2B LINE L1 -2 6998 6435 3 1498 328 362 38 38 chr13 119755616 119755880 -528432 + L1M5 LINE L1 5290 5553 -620 3 1498 404 262 53 33 chr13 119756169 119756319 -527993 - L1M5 LINE L1 -2735 3411 3259 3 1498 287 252 70 8 chr13 119756366 119756494 -527818 - L1M5 LINE L1 -3263 2883 2748 3 1498 1973 136 53 0 chr13 119757081 119757404 -526908 - Lx4A LINE L1 0 7058 6719 3 1498 227 146 18 0 chr13 119757447 119757502 -526810 + T-rich Low_complexity Low_complexity 4 59 0 3 1498 3508 65 32 15 chr13 119757557 119758024 -526288 + MT2C_Mm LTR ERVL 1 475 0 3 1498 217 154 58 0 chr13 119758027 119758079 -526233 + T-rich Low_complexity Low_complexity 2 56 0 3 1498 393 361 81 5 chr13 119759102 119759311 -525001 - L2 LINE L2 -498 2921 2697 3 1498 337 300 147 113 chr13 119759631 119759950 -524362 - MLT1C LTR MaLR -26 441 61 3 1498 307 270 144 78 chr13 119761566 119761823 -522489 - L1MA8 LINE L1 -356 5935 5662 3 1498 252 100 0 0 chr13 119761973 119762013 -522299 + (TTTG)n Simple_repeat Simple_repeat 2 41 0 3 1498 482 290 48 0 chr13 119762040 119762164 -522148 - RSINE1 SINE B4 -25 140 11 3 1498 1129 134 116 29 chr13 119762299 119762506 -521806 + URR1A DNA MER1_type 2 226 0 3 1498 22 35 0 0 chr13 119763755 119763784 -520528 + AT_rich Low_complexity Low_complexity 1 29 0 3 1498 585 121 0 11 chr13 119764807 119764899 -519413 - Lx9 LINE L1 -636 7008 6918 3 1498 526 131 0 10 chr13 119764899 119764999 -519313 + Lx9 LINE L1 7538 7636 -8 3 1498 592 288 97 20 chr13 119765048 119765410 -518902 - L1MA4 LINE L1 -442 5858 5474 3 1498 257 365 36 48 chr13 119765465 119765632 -518680 - RSINE1 SINE B4 0 165 1 3 1498 354 287 68 39 chr13 119765644 119765944 -518368 - L1MA4 LINE L1 -442 5441 5130 3 1498 270 0 0 0 chr13 119765944 119765974 -518338 + (TC)n Simple_repeat Simple_repeat 1 30 0 3 1498 244 316 99 43 chr13 119765974 119766116 -518196 - L1MA4 LINE L1 -751 5129 4970 3 1498 684 96 0 0 chr13 119767163 119767278 -517034 + (TC)n Simple_repeat Simple_repeat 2 116 0 3 1498 306 0 0 0 chr13 119767278 119767311 -517001 + (TA)n Simple_repeat Simple_repeat 1 34 0 3 1498 334 315 22 0 chr13 119767392 119767481 -516831 - B4A SINE B4 -4 288 198 3 1498 220 262 98 0 chr13 119767535 119767596 -516716 - B4A SINE B4 -220 72 6 3 1498 420 279 58 7 chr13 119767708 119767845 -516467 + B1_Mur1 SINE Alu 4 147 -2 3 1498 184 222 14 14 chr13 119767845 119767918 -516394 + GA-rich Low_complexity Low_complexity 1 73 0 3 1498 1387 127 14 0 chr13 119768969 119769182 -515130 - URR1A DNA MER1_type -3 223 8 3 1498 450 0 0 0 chr13 119769644 119769694 -514618 + (TG)n Simple_repeat Simple_repeat 2 51 0 3 1498 298 255 61 10 chr13 119775067 119775166 -509146 + B3 SINE B2 1 104 -112 3 1498 918 226 92 59 chr13 119775221 119775585 -508727 + RMER20B LTR ERVK 82 458 -58 3 1498 302 311 53 13 chr13 119775648 119775798 -508514 + B3A SINE B2 55 210 -6 3 1498 249 284 44 24 chr13 119775823 119775945 -508367 - MER45C DNA Tip100 -723 230 103 3 1498 750 11 0 0 chr13 119776021 119776108 -508204 + (TG)n Simple_repeat Simple_repeat 2 88 0 3 1498 887 79 16 0 chr13 119776268 119776395 -507917 + B1_Mus1 SINE Alu 10 138 -10 3 1498 279 0 0 0 chr13 119776397 119776428 -507884 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 3 1498 2088 294 56 56 chr13 119776554 119777492 -506820 + Lx5 LINE L1 6004 6953 -97 3 1498 665 229 64 0 chr13 119777503 119777660 -506652 - RMER6C LTR ERVK -26 664 498 3 1498 34558 62 4 8 chr13 119777674 119782805 -501507 + L1Md_F3 LINE L1 481 5586 -297 3 1498 7889 46 12 1 chr13 119782805 119783791 -500521 + L1Md_F3 LINE L1 5587 6583 -1 3 1498 2336 137 120 20 chr13 119783795 119784294 -500018 - RMER6C LTR ERVK -141 549 1 3 1498 181 338 59 0 chr13 119785036 119785104 -499208 - L2b LINE L2 0 3375 3304 3 1498 33317 79 8 26 chr13 119785400 119790676 -493636 + L1Md_F2 LINE L1 414 5586 -297 3 1498 7927 52 4 4 chr13 119790676 119791672 -492640 + L1Md_F2 LINE L1 5587 6582 0 3 1498 25 31 0 0 chr13 119791677 119791709 -492603 + AT_rich Low_complexity Low_complexity 1 32 0 3 1498 28 61 0 0 chr13 119792214 119792263 -492049 + AT_rich Low_complexity Low_complexity 1 49 0 4 1498 395 302 33 25 chr13 119792273 119792395 -491917 - B1F2 SINE Alu -19 128 6 4 1498 1570 74 10 0 chr13 119792704 119792906 -491406 + L1Md_F2 LINE L1 5383 5586 -297 4 1498 7820 54 3 9 chr13 119792907 119794057 -490255 + L1Md_F2 LINE L1 5588 6582 0 4 1498 21 36 0 0 chr13 119794087 119794115 -490197 + AT_rich Low_complexity Low_complexity 1 28 0 4 1498 330 312 108 86 chr13 119794232 119794418 -489894 + MTD LTR MaLR 1 190 -189 4 1498 248 49 49 0 chr13 119794465 119794506 -489806 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 4 1498 344 223 72 23 chr13 119794509 119794617 -489695 + MTD LTR MaLR 201 350 -69 4 1498 404 348 20 75 chr13 119794800 119794851 -489461 + ID_B1 SINE B4 34 185 -39 4 1498 701 261 7 0 chr13 119794851 119794989 -489323 + B1_Mur2 SINE Alu 1 139 -10 4 1498 408 40 0 0 chr13 119795059 119795109 -489203 + (CA)n Simple_repeat Simple_repeat 2 51 0 4 1498 203 149 0 41 chr13 119795573 119795622 -488690 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 4 1498 207 186 0 0 chr13 119797367 119797410 -486902 + (TTA)n Simple_repeat Simple_repeat 2 44 0 4 1498 792 244 42 5 chr13 119797706 119797920 -486392 + Lx9 LINE L1 7248 7469 -175 4 1498 558 0 0 0 chr13 119797920 119797982 -486330 + (TG)n Simple_repeat Simple_repeat 2 63 0 4 1498 226 186 61 10 chr13 119798096 119798194 -486118 + Lx5 LINE L1 6947 7049 -1 4 187 650 230 23 32 chr13 119799786 119800002 -484310 - Lx9 LINE L1 -8 7636 7423 4 1499 350 236 78 39 chr13 119800076 119800204 -484108 - L1MCa LINE L1 -4475 2033 1901 4 1499 245 146 21 0 chr13 119800207 119800255 -484057 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 4 1499 1401 246 165 6 chr13 119800264 119800779 -483533 - Lx9 LINE L1 -128 7516 6920 4 1499 787 340 71 0 chr13 119802090 119802358 -481954 + B4A SINE B4 2 288 -4 4 1499 210 118 0 0 chr13 119802385 119802419 -481893 + (CA)n Simple_repeat Simple_repeat 1 34 0 4 1499 301 100 100 0 chr13 119803530 119803580 -480732 - ORR1C1 LTR MaLR 0 378 324 4 1499 234 223 191 26 chr13 119803629 119803705 -480607 + RMER21B LTR ERV1 489 585 -257 4 1499 1071 122 0 0 chr13 119803705 119803877 -480435 + (GGA)n Simple_repeat Simple_repeat 3 174 0 4 1499 234 223 191 26 chr13 119803877 119803915 -480397 + RMER21B LTR ERV1 586 622 -220 4 1499 1170 95 0 4 chr13 119803915 119804170 -480142 + (GGA)n Simple_repeat Simple_repeat 1 254 0 4 1499 375 242 32 0 chr13 119804173 119804268 -480044 - Lx6 LINE L1 -136 7324 7227 4 1499 931 270 8 14 chr13 119804247 119804555 -479757 + Lx5 LINE L1 6084 6606 -854 4 1499 1393 155 20 24 chr13 119804555 119804840 -479472 - ORR1B2 LTR MaLR -39 328 11 4 1499 2773 86 0 0 chr13 119804840 119805213 -479099 - L1_Mm LINE L1 -648 5235 4863 4 1499 9237 58 20 1 chr13 119805209 119806389 -477923 + L1Md_F3 LINE L1 4384 5586 -297 4 1499 7734 51 12 0 chr13 119806389 119807412 -476900 + L1Md_F3 LINE L1 5587 6584 0 4 1499 19471 164 39 17 chr13 119807435 119810603 -473709 + Lx LINE L1 2084 5371 -515 4 1499 1229 144 0 0 chr13 119810603 119810797 -473515 + B2_Mm2 SINE B2 2 195 0 4 1499 19471 164 39 17 chr13 119810797 119810826 -473486 + Lx LINE L1 5372 5374 -512 4 1499 1152 119 0 0 chr13 119810826 119811003 -473309 + (GAAAA)n Simple_repeat Simple_repeat 3 179 0 4 1499 19471 109 31 12 chr13 119811003 119812263 -472049 + Lx LINE L1 5375 6641 -13 4 1499 936 0 0 0 chr13 119812285 119812389 -471923 + (GAAA)n Simple_repeat Simple_repeat 3 106 0 4 1499 699 35 0 0 chr13 119812393 119812479 -471833 + (GGGA)n Simple_repeat Simple_repeat 3 88 0 4 1499 980 119 6 0 chr13 119812479 119812646 -471666 + (GAAA)n Simple_repeat Simple_repeat 4 172 0 4 1499 268 244 74 20 chr13 119813124 119813206 -471106 + ID_B1 SINE B4 8 91 -201 4 1499 328 65 65 0 chr13 119815807 119815869 -468443 + (CAGAGA)n Simple_repeat Simple_repeat 1 66 0 4 1499 411 78 0 0 chr13 119815943 119816007 -468305 + (CA)n Simple_repeat Simple_repeat 1 64 0 4 1499 269 68 0 22 chr13 119816471 119816516 -467796 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 4 1499 244 299 104 0 chr13 119816574 119816641 -467671 - ID SINE ID -150 74 1 4 1499 280 236 135 49 chr13 119817046 119817217 -467095 - ORR1E LTR MaLR -1 378 201 4 1499 699 275 33 0 chr13 119817243 119817425 -466887 - ORR1E LTR MaLR -164 195 8 4 1499 357 352 40 24 chr13 119817816 119818189 -466123 + L1MEc LINE L1 43 421 -5979 4 1499 252 289 41 15 chr13 119818377 119818508 -465804 + PB1D10 SINE Alu 17 148 -1 4 1499 525 261 48 14 chr13 119818668 119818819 -465493 + ID_B1 SINE B4 70 222 -70 4 1499 309 353 51 89 chr13 119818821 119819216 -465096 + L1MEc LINE L1 916 1295 -5120 4 1499 870 76 0 0 chr13 119819717 119819836 -464476 + (TCTA)n Simple_repeat Simple_repeat 2 120 0 4 1499 274 336 69 11 chr13 119819838 119820112 -464200 + L1MEc LINE L1 5166 5455 -864 4 1499 439 279 55 71 chr13 119820337 119820592 -463720 + L1MEc LINE L1 5713 5963 -389 4 1499 399 348 84 14 chr13 119820826 119821112 -463200 + MLT1D LTR MaLR 108 413 -92 4 1499 954 233 122 133 chr13 119821382 119821922 -462390 + Lx7 LINE L1 7163 7696 0 4 1499 202 331 32 32 chr13 119821966 119822091 -462221 + MIR SINE MIR 137 261 -1 4 1499 31 0 0 0 chr13 119822520 119822551 -461761 + AT_rich Low_complexity Low_complexity 1 31 0 4 1499 860 251 76 9 chr13 119822701 119822926 -461386 - ORR1D2 LTR MaLR -4 366 127 4 1499 718 282 98 90 chr13 119822927 119823293 -461019 - Lx8 LINE L1 -637 6836 6468 4 1499 183 237 115 33 chr13 119824205 119824266 -460046 + L2b LINE L2 3205 3270 -105 4 1499 28 29 0 0 chr13 119824315 119824350 -459962 + AT_rich Low_complexity Low_complexity 1 35 0 4 1499 4165 52 10 0 chr13 119824440 119824956 -459356 - L1_Mus1 LINE L1 0 6567 6047 4 1499 890 36 27 0 chr13 119824956 119825068 -459244 + L1_Mus1 LINE L1 5935 6049 -518 4 1499 459 0 0 0 chr13 119826645 119826696 -457616 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1499 378 61 0 0 chr13 119826697 119826746 -457566 + (TTG)n Simple_repeat Simple_repeat 2 50 0 4 1499 404 270 49 176 chr13 119826781 119827166 -457146 + RMER10A LTR ERVL 65 424 -18 4 1499 342 0 0 0 chr13 119827170 119827208 -457104 + (TG)n Simple_repeat Simple_repeat 2 39 0 4 1499 325 300 107 89 chr13 119827656 119828012 -456300 - MLT1A1 LTR MaLR -16 349 1 4 1499 495 0 0 0 chr13 119828471 119828526 -455786 + (GA)n Simple_repeat Simple_repeat 2 56 0 4 1499 254 250 108 20 chr13 119829315 119829417 -454895 - MLT1A1 LTR MaLR -215 193 83 4 1499 22 35 0 0 chr13 119829533 119829562 -454750 + AT_rich Low_complexity Low_complexity 1 29 0 4 1499 10776 40 0 1 chr13 119830431 119831777 -452535 - L1_Mm LINE L1 -2906 2977 1634 4 1499 531 45 0 0 chr13 119832839 119832905 -451407 + (CATA)n Simple_repeat Simple_repeat 2 67 0 4 1499 786 93 0 116 chr13 119833444 119833590 -450722 - B1_Mur4 SINE Alu 0 150 22 4 1499 2391 41 0 7 chr13 119834569 119834863 -449449 - L1Md_F2 LINE L1 -14 6568 6277 4 1499 219 220 0 0 chr13 119834863 119834913 -449399 + (TA)n Simple_repeat Simple_repeat 1 50 0 4 1499 235 67 0 43 chr13 119834916 119834950 -449362 - L1Md_F2 LINE L1 -16 6568 6535 4 1499 4776 60 12 0 chr13 119834950 119835553 -448759 - L1Md_F2 LINE L1 -1 6581 5972 4 1499 235 67 0 43 chr13 119835553 119835565 -448747 - L1Md_F2 LINE L1 -50 6534 6524 4 1499 1926 48 0 0 chr13 119835563 119835791 -448521 - L1Md_F2 LINE L1 -289 6293 6066 4 1499 506 366 34 60 chr13 119836035 119836232 -448080 + HERV16-int LTR ERVL 914 1105 -3891 4 1499 1174 117 21 26 chr13 119836232 119836425 -447887 + B2_Mm2 SINE B2 2 193 -2 4 1499 506 366 34 60 chr13 119836425 119836727 -447585 + HERV16-int LTR ERVL 1106 1400 -3596 4 1499 331 330 77 41 chr13 119836845 119837066 -447246 + L1MD1 LINE L1 4901 5129 -1017 4 1499 1096 300 56 25 chr13 119837112 119837260 -447052 + MTE2b LTR MaLR 13 169 -210 4 1499 1200 111 0 0 chr13 119837260 119837440 -446872 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 4 1499 1096 300 56 25 chr13 119837440 119837647 -446665 + MTE2b LTR MaLR 170 379 0 4 1499 22 56 0 0 chr13 119837720 119837756 -446556 + AT_rich Low_complexity Low_complexity 1 36 0 4 1499 529 306 96 14 chr13 119837759 119838107 -446205 + L1MD1 LINE L1 5352 5716 -448 4 1499 324 349 29 7 chr13 119838383 119838542 -445770 + L1MD1 LINE L1 5860 6022 -157 4 1499 7509 67 10 8 chr13 119840025 119840302 -444010 - L1Md_F2 LINE L1 -14 6568 6288 4 1499 3265 53 0 0 chr13 119840302 119840698 -443614 + MTA_Mm LTR MaLR 1 396 0 4 1499 34529 73 2 5 chr13 119840698 119845774 -438538 - L1Md_F2 LINE L1 -295 6287 1226 4 1499 504 148 82 67 chr13 119845801 119845996 -438316 - MurERV4_19-int LTR ERVK -91 5689 5492 4 1499 38 0 0 0 chr13 119846035 119846073 -438239 + AT_rich Low_complexity Low_complexity 1 38 0 4 1499 230 267 37 74 chr13 119846073 119846154 -438158 - RMER4B LTR ERVK -57 528 451 4 1499 466 93 0 85 chr13 119846203 119846285 -438027 + L1Md_F2 LINE L1 5512 5586 -297 4 1499 7290 81 7 1 chr13 119846285 119847272 -437040 + L1Md_F2 LINE L1 5587 6579 -3 4 1499 185 0 40 0 chr13 119847279 119847304 -437008 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 4 1499 243 219 40 27 chr13 119847304 119847323 -436989 + L1M3 LINE L1 5625 5642 -538 4 1499 6985 137 28 73 chr13 119847323 119848668 -435644 - MurERV4_19-int LTR ERVK -394 5386 4103 4 1499 352 305 74 0 chr13 119848885 119848980 -435332 - 5S rRNA rRNA -19 102 1 4 1499 297 330 11 32 chr13 119849228 119849322 -434990 - L2b LINE L2 0 3375 3284 4 1499 258 354 17 68 chr13 119849328 119849525 -434787 - L2b LINE L2 -228 3159 2971 4 1499 1025 177 49 5 chr13 119850247 119850451 -433861 + MER121 Unknown Unknown 39 251 -161 4 1499 291 175 0 0 chr13 119851047 119851104 -433208 + T-rich Low_complexity Low_complexity 1 57 0 4 1499 21 0 0 0 chr13 119851405 119851426 -432886 + AT_rich Low_complexity Low_complexity 1 21 0 4 1499 221 324 14 14 chr13 119851977 119852049 -432263 + B4 SINE B4 3 74 -218 4 1499 890 90 8 0 chr13 119852062 119852196 -432116 + (GGAA)n Simple_repeat Simple_repeat 1 135 0 4 1499 1054 50 35 0 chr13 119852463 119852604 -431708 + B1_Mm SINE Alu 2 147 0 4 1499 1135 88 0 0 chr13 119852990 119853137 -431175 + B1_Mus2 SINE Alu 1 147 0 4 1499 333 68 0 0 chr13 119856359 119856403 -427909 + (TA)n Simple_repeat Simple_repeat 2 45 0 4 1499 3504 76 6 6 chr13 119856436 119856924 -427388 - Lx3_Mus LINE L1 0 7009 6522 4 1499 185 275 36 81 chr13 119857110 119857221 -427091 + MER5B DNA MER1_type 4 109 -69 4 1499 252 143 0 0 chr13 119858330 119858372 -425940 + (A)n Simple_repeat Simple_repeat 1 42 0 4 1499 189 159 0 0 chr13 119858798 119858842 -425470 + A-rich Low_complexity Low_complexity 1 44 0 4 1499 218 298 32 39 chr13 119859168 119859290 -425022 + MIR SINE MIR 39 158 -50 4 1499 1055 80 7 0 chr13 119859399 119859550 -424762 + (TC)n Simple_repeat Simple_repeat 1 152 0 4 1499 376 248 57 93 chr13 119859550 119859685 -424627 + ORR1D1 LTR MaLR 175 309 -75 4 1499 2700 52 54 0 chr13 119859688 119860037 -424275 - L1_Mus2 LINE L1 0 6566 6199 5 1499 695 52 31 0 chr13 119860037 119860134 -424178 + L1_Mus2 LINE L1 6059 6158 -408 5 1499 247 167 63 48 chr13 119860134 119860197 -424115 + ORR1D1 LTR MaLR 308 371 -7 4 1499 523 284 176 88 chr13 119860282 119860427 -423885 + 7SK RNA RNA 5 178 -153 5 1499 189 94 0 0 chr13 119860427 119860459 -423853 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 5 1499 523 284 176 88 chr13 119860459 119860529 -423783 + 7SK RNA RNA 179 239 -92 5 1499 604 291 26 97 chr13 119860781 119861009 -423303 + B3 SINE B2 1 212 -4 5 1499 409 241 56 119 chr13 119861672 119861769 -422543 + B1_Mur4 SINE Alu 1 96 -54 5 1499 3440 29 10 2 chr13 119861769 119862184 -422128 - L1Md_F3 LINE L1 0 6584 6167 5 1499 409 241 56 119 chr13 119862184 119862246 -422066 + B1_Mur4 SINE Alu 97 150 0 5 1499 3702 71 8 22 chr13 119862979 119863482 -420830 + L1Md_F2 LINE L1 6070 6565 -17 5 1499 315 0 0 0 chr13 119863529 119863564 -420748 + (TC)n Simple_repeat Simple_repeat 1 35 0 5 1499 339 25 0 0 chr13 119863564 119863603 -420709 + (CA)n Simple_repeat Simple_repeat 1 40 0 5 1499 363 375 28 28 chr13 119863648 119863829 -420483 - B4A SINE B4 -19 273 93 5 1499 501 17 0 0 chr13 119863835 119863893 -420419 + (TTTC)n Simple_repeat Simple_repeat 2 59 0 5 1499 2388 171 41 5 chr13 119864008 119864425 -419887 - Lx5 LINE L1 0 7050 6619 5 1499 398 238 0 35 chr13 119864435 119864522 -419790 - B4A SINE B4 -206 86 3 5 1499 1494 261 103 96 chr13 119864544 119864660 -419652 - Lx9 LINE L1 -3 7641 7524 5 1499 423 0 0 0 chr13 119864660 119864707 -419605 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 5 1499 560 106 0 11 chr13 119864707 119864801 -419511 + (TATG)n Simple_repeat Simple_repeat 2 95 0 5 1499 1494 261 103 96 chr13 119864801 119864926 -419386 - Lx9 LINE L1 -121 7523 7357 5 1499 5410 125 64 9 chr13 119864926 119865831 -418481 + RMER17B LTR ERVK 1 955 -3 5 1499 1494 261 103 96 chr13 119865831 119866247 -418065 - Lx9 LINE L1 -288 7356 6986 5 1499 360 18 17 34 chr13 119866247 119866306 -418006 + (TTTG)n Simple_repeat Simple_repeat 3 60 0 5 1499 1494 261 103 96 chr13 119866306 119866405 -417907 - Lx9 LINE L1 -659 6985 6879 5 1499 592 285 23 77 chr13 119866480 119866800 -417512 - MER33 DNA MER1_type -9 315 10 5 1499 204 250 0 0 chr13 119866832 119866880 -417432 + T-rich Low_complexity Low_complexity 3 50 0 5 1499 415 335 66 0 chr13 119866889 119867041 -417271 - Lx8 LINE L1 -745 6728 6567 5 1499 213 240 0 0 chr13 119867444 119867494 -416818 + A-rich Low_complexity Low_complexity 1 50 0 5 1499 24 53 0 0 chr13 119867504 119867542 -416770 + AT_rich Low_complexity Low_complexity 1 38 0 5 1499 362 355 7 7 chr13 119869278 119869417 -414895 + GA-rich Low_complexity Low_complexity 3 141 0 5 1499 289 283 91 8 chr13 119869605 119869726 -414586 + ERVL-B4-int LTR ERVL 3936 4066 -1648 5 1499 424 281 86 48 chr13 119869775 119869962 -414350 + ERVL-B4-int LTR ERVL 4160 4353 -1132 5 1499 238 26 51 0 chr13 119869991 119870030 -414282 + (TTG)n Simple_repeat Simple_repeat 2 42 0 5 1499 566 274 43 21 chr13 119870056 119870296 -414016 + ERVL-B4-int LTR ERVL 4359 4715 -1046 5 1499 868 286 28 56 chr13 119870309 119870628 -413684 + ERVL-B4-int LTR ERVL 4650 4959 -755 5 1499 688 292 21 11 chr13 119870649 119870836 -413476 - ERVL-int LTR ERVL -632 5125 4937 5 1499 254 344 51 51 chr13 119870896 119871034 -413278 + MLT1A1 LTR MaLR 202 339 -69 5 1499 2072 335 42 39 chr13 119871175 119872095 -412217 + Lx8 LINE L1 6388 7310 -163 5 1499 1190 147 83 0 chr13 119872104 119872308 -412004 - ORR1A2 LTR MaLR -106 221 1 5 1499 233 316 215 0 chr13 119872313 119872471 -411841 + L1MB2 LINE L1 5817 6008 -163 5 1499 24 0 0 0 chr13 119872587 119872611 -411701 + AT_rich Low_complexity Low_complexity 1 24 0 5 1499 1704 127 11 4 chr13 119873220 119873481 -410831 + Lx2B LINE L1 5664 5926 -1074 5 1499 2371 189 65 35 chr13 119873481 119874065 -410247 + RLTR31_Mm LTR ERVK 1 692 0 5 1499 5028 162 41 13 chr13 119874068 119874113 -410199 + Lx2B LINE L1 5924 5969 -1031 5 1499 1131 71 0 0 chr13 119874113 119874254 -410058 + B1_Mus2 SINE Alu 1 141 -6 5 1499 891 0 0 0 chr13 119874255 119874354 -409958 + (GAA)n Simple_repeat Simple_repeat 3 101 0 5 1499 5028 162 41 13 chr13 119874354 119875229 -409083 + Lx2B LINE L1 5970 6872 -128 5 1499 375 259 0 14 chr13 119875406 119875547 -408765 + Lx2B LINE L1 6862 7000 0 5 1499 213 39 0 0 chr13 119875860 119875886 -408426 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 5 1499 202 130 65 0 chr13 119875893 119875939 -408373 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 5 1499 401 268 112 30 chr13 119876201 119876370 -407942 - Lx8 LINE L1 -2 7471 7289 5 1499 372 291 77 14 chr13 119876440 119876583 -407729 - Lx8 LINE L1 -318 7155 7004 5 1499 404 247 34 16 chr13 119877690 119877829 -406483 + MER3 DNA MER1_type 31 167 -42 5 1499 463 319 12 42 chr13 119877829 119877996 -406316 + RSINE1 SINE B4 2 163 -2 5 1499 26 30 0 0 chr13 119878061 119878094 -406218 + AT_rich Low_complexity Low_complexity 1 33 0 5 1499 371 326 7 27 chr13 119878186 119878334 -405978 + Charlie5 DNA MER1_type 2340 2484 -140 5 1499 341 261 48 119 chr13 119878371 119878497 -405815 + B4 SINE B4 2 118 -174 5 1499 450 53 0 0 chr13 119878590 119878647 -405665 + (CA)n Simple_repeat Simple_repeat 1 57 0 5 1499 1514 130 149 37 chr13 119878695 119879228 -405084 - RMER6D LTR ERVK 0 690 1 5 1499 415 297 112 37 chr13 119880450 119880691 -403621 + ORSL DNA Tip100 1 259 -16 5 1499 238 273 125 48 chr13 119881474 119881578 -402734 - L2a LINE L2 0 3426 3315 5 1499 254 412 107 18 chr13 119881693 119881918 -402394 - L2 LINE L2 -342 3077 2833 5 1499 258 32 0 0 chr13 119884329 119884360 -399952 + (TG)n Simple_repeat Simple_repeat 2 32 0 5 1499 457 308 56 19 chr13 119884650 119884865 -399447 - MER95 LTR ERV -203 228 6 5 1499 249 304 87 37 chr13 119885093 119885229 -399083 + MLT1D LTR MaLR 44 187 -440 5 1499 717 296 13 9 chr13 119886004 119886229 -398083 + Lx9 LINE L1 712 937 -6671 5 1499 1391 238 70 8 chr13 119886241 119886903 -397409 + Lx9 LINE L1 1001 1703 -4144 5 1499 36852 51 5 8 chr13 119886926 119893244 -391068 - L1Md_T LINE L1 -1 6581 281 5 1499 3350 254 66 28 chr13 119893327 119894125 -390187 + Lx9 LINE L1 1765 2580 -3267 5 1499 293 0 27 0 chr13 119894125 119894162 -390150 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 5 1499 3350 254 66 28 chr13 119894162 119894627 -389685 + Lx9 LINE L1 2581 3075 -2772 5 1499 300 27 0 0 chr13 119894627 119894664 -389648 + (CA)n Simple_repeat Simple_repeat 2 38 0 5 1499 240 164 0 18 chr13 119894694 119894750 -389562 + RMER1C Other Other 1283 1337 -5 5 1499 5860 239 45 69 chr13 119894773 119896555 -387757 + Lx9 LINE L1 3611 5311 -536 5 1499 1305 77 0 2 chr13 119896555 119897013 -387299 + (GAA)n Simple_repeat Simple_repeat 1 456 0 5 1499 5860 234 84 40 chr13 119897013 119898281 -386031 + Lx9 LINE L1 5312 6812 -832 5 1499 29 0 0 0 chr13 119900393 119900422 -383890 + AT_rich Low_complexity Low_complexity 1 29 0 5 1499 240 35 0 0 chr13 119903216 119903245 -381067 + (TGG)n Simple_repeat Simple_repeat 3 31 0 5 1499 279 295 53 30 chr13 119903456 119903589 -380723 + L1ME3A LINE L1 5323 5458 -715 5 1499 22 0 0 0 chr13 119903597 119903619 -380693 + AT_rich Low_complexity Low_complexity 1 22 0 5 1499 1215 202 93 47 chr13 119903627 119903928 -380384 - RLTR46 LTR ERVK -5 315 1 5 1499 646 327 4 35 chr13 119904020 119904277 -380035 + Lx9 LINE L1 6501 6749 -895 5 1499 549 175 264 6 chr13 119904277 119904451 -379861 - URR1B DNA MER1_type 0 225 7 5 1499 1099 280 122 45 chr13 119904466 119905064 -379248 + Lx9 LINE L1 6750 7393 -251 5 1499 427 251 64 34 chr13 119905419 119905654 -378658 + Lx9 LINE L1 7388 7629 -15 5 1499 235 300 0 0 chr13 119905682 119905742 -378570 + L1ME3A LINE L1 5595 5654 -508 5 1499 1044 91 0 14 chr13 119905748 119905893 -378419 + B1_Mus1 SINE Alu 4 146 -2 5 1499 195 42 0 0 chr13 119905894 119905918 -378394 + (TAAAAA)n Simple_repeat Simple_repeat 3 26 0 5 1499 189 0 0 0 chr13 119906054 119906075 -378237 + (TA)n Simple_repeat Simple_repeat 1 21 0 5 1499 21 36 0 0 chr13 119906117 119906145 -378167 + AT_rich Low_complexity Low_complexity 1 28 0 5 1499 1174 335 84 30 chr13 119906216 119906986 -377326 - Lx8 LINE L1 -12 7461 6650 5 1499 279 340 44 56 chr13 119907020 119907269 -377043 + L1ME3A LINE L1 5920 6165 -8 5 1499 929 163 0 0 chr13 119907776 119907917 -376395 - B1_Mur4 SINE Alu -9 141 1 5 1499 474 88 0 0 chr13 119908500 119908568 -375744 + (CTA)n Simple_repeat Simple_repeat 2 69 0 5 1499 204 158 0 0 chr13 119908728 119908766 -375546 + T-rich Low_complexity Low_complexity 5 42 0 5 1499 236 339 81 52 chr13 119908901 119909075 -375237 - MIR SINE MIR -37 225 47 5 1499 2779 50 9 3 chr13 119909293 119909637 -374675 + ORR1A1 LTR MaLR 1 346 0 5 1499 517 28 28 0 chr13 119910044 119910115 -374197 + (TC)n Simple_repeat Simple_repeat 1 73 0 5 1499 2478 90 18 53 chr13 119910422 119910819 -373493 + Lx LINE L1 6267 6649 -5 5 1499 282 248 20 10 chr13 119911183 119911285 -373027 + L1VL1 LINE L1 1 103 -6319 5 1499 1333 123 5 5 chr13 119911273 119911485 -372827 + L1Md_F LINE L1 204 415 -6104 5 1499 26610 104 4 20 chr13 119911482 119913767 -370545 + L1Md_F2 LINE L1 98 2021 -3862 5 1499 3005 72 107 0 chr13 119913767 119914196 -370116 + IAPLTR2_Mm LTR ERVK 1 475 0 5 1499 26610 67 2 3 chr13 119914196 119917130 -367182 + L1Md_F2 LINE L1 2022 4950 -933 5 1499 2992 21 0 0 chr13 119917130 119917467 -366845 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1499 53347 17 17 6 chr13 119917467 119923873 -360439 - IAPEz-int LTR ERVK 0 6481 8 5 1499 2965 24 0 0 chr13 119923873 119924210 -360102 - IAPLTR1a_Mm LTR ERVK 0 337 1 5 1499 5240 25 0 2 chr13 119924210 119924853 -359459 + L1Md_F2 LINE L1 4945 5586 -297 5 1499 8369 34 0 6 chr13 119924854 119925855 -358457 + L1Md_F2 LINE L1 5588 6582 0 5 1499 542 330 96 36 chr13 119925865 119926229 -358083 - Lx8 LINE L1 -2 7471 7086 5 1499 704 221 25 50 chr13 119926241 119926347 -357965 - L1_Mur3 LINE L1 -1829 4051 3942 5 1499 786 258 121 121 chr13 119926347 119926959 -357353 - RLTR18 LTR ERVK -4 612 1 5 1499 704 221 25 50 chr13 119926959 119927052 -357260 - L1_Mur3 LINE L1 -1939 3941 3857 5 1499 949 232 7 50 chr13 119927055 119927074 -357238 + L1_Mur3 LINE L1 3508 3525 -2355 5 1499 2058 121 20 58 chr13 119927074 119927416 -356896 - ORR1A4 LTR MaLR 0 329 1 5 1499 949 232 7 50 chr13 119927416 119927696 -356616 + L1_Mur3 LINE L1 3526 3794 -2086 5 1499 428 298 109 17 chr13 119927696 119927870 -356442 - Cheshire DNA MER1_type -1396 1024 835 5 1499 571 347 12 32 chr13 119928254 119928504 -355808 - MLT1E1A LTR MaLR -9 671 427 5 1499 424 310 22 44 chr13 119929866 119930001 -354311 + B1F1 SINE Alu 2 133 -16 5 187 7294 51 14 9 chr13 119930344 119931368 -352944 - L1Md_F2 LINE L1 0 6582 5546 5 1500 405 0 0 0 chr13 119931390 119931435 -352877 + (TAA)n Simple_repeat Simple_repeat 3 47 0 5 1500 190 273 112 11 chr13 119932245 119932334 -351978 + L4 LINE RTE 610 707 -1322 5 1500 1091 105 11 32 chr13 119932912 119933099 -351213 - L1_Mus3 LINE L1 0 6638 6456 5 1500 180 0 0 0 chr13 119933269 119933289 -351023 + (T)n Simple_repeat Simple_repeat 1 20 0 5 1500 390 324 9 9 chr13 119933375 119933481 -350831 - PB1D10 SINE Alu -1 116 11 5 1500 276 329 14 0 chr13 119933676 119933749 -350563 - ID4_ SINE ID 0 83 10 5 1500 186 71 0 0 chr13 119934550 119934578 -349734 + (T)n Simple_repeat Simple_repeat 1 28 0 5 1500 621 247 0 0 chr13 119935491 119935657 -348655 + A-rich Low_complexity Low_complexity 1 166 0 5 1500 570 205 124 16 chr13 119936710 119936903 -347409 + MER121 Unknown Unknown 114 327 -85 5 1500 249 277 10 41 chr13 119937202 119937300 -347012 - L1M1 LINE L1 -400 5900 5806 6 1500 369 323 85 45 chr13 119937313 119937514 -346798 + B3 SINE B2 1 209 -7 6 1500 236 266 69 85 chr13 119937578 119937767 -346545 - L1M1 LINE L1 -554 5737 5552 6 1500 1068 273 42 68 chr13 119937796 119937916 -346396 - MTE2b LTR MaLR -3 376 256 6 1500 219 88 0 0 chr13 119937916 119937950 -346362 + (CATA)n Simple_repeat Simple_repeat 2 35 0 6 1500 1068 273 42 68 chr13 119937950 119938131 -346181 - MTE2b LTR MaLR -124 255 78 6 1500 1131 131 20 5 chr13 119938131 119938330 -345982 + Lx LINE L1 6448 6649 -5 6 1500 1068 273 42 68 chr13 119938330 119938412 -345900 - MTE2b LTR MaLR -302 77 2 6 1500 712 70 0 9 chr13 119941107 119941222 -343090 - Lx3_Mus LINE L1 -8 7001 6888 6 1500 2579 30 30 0 chr13 119941450 119941780 -342532 - RLTR10A LTR ERVK -43 368 29 6 1500 7520 34 1 0 chr13 119941780 119942712 -341600 - L1Md_A LINE L1 -1 6581 5649 6 1500 1215 231 49 42 chr13 119942712 119943020 -341292 - MTD-int LTR MaLR -652 606 297 6 1500 1131 242 6 59 chr13 119943381 119943701 -340611 - MTD-int LTR MaLR -955 303 1 6 1500 311 197 34 0 chr13 119943703 119943778 -340534 - MTD LTR MaLR -2 419 339 6 1500 872 48 0 45 chr13 119943808 119943834 -340478 - ORR1A0 LTR MaLR -220 126 106 6 1500 445 160 50 10 chr13 119943834 119943935 -340377 - Lx9 LINE L1 -1 7643 7539 6 1500 872 48 0 45 chr13 119943935 119944040 -340272 - ORR1A0 LTR MaLR -241 105 1 6 1500 365 269 13 0 chr13 119945521 119945599 -338713 + PB1D10 SINE Alu 1 79 -38 6 1500 206 344 62 23 chr13 119946312 119946440 -337872 + MIRb SINE MIR 45 177 -91 6 1500 2447 167 43 11 chr13 119948459 119948919 -335393 + Lx2B LINE L1 6521 6995 -5 6 1500 32127 75 13 3 chr13 119948963 119953533 -330779 - L1Md_F2 LINE L1 0 6582 1957 6 1500 300 53 0 0 chr13 119953533 119953571 -330741 + (TTG)n Simple_repeat Simple_repeat 2 39 0 6 1500 32127 93 40 0 chr13 119953571 119955087 -329225 - L1Md_F2 LINE L1 -3927 1956 387 6 1500 2756 180 11 10 chr13 119955601 119956123 -328189 - RLTR11A LTR ERVK -2 526 4 6 1500 5028 227 106 96 chr13 119956126 119958457 -325855 - MYSERV16_I-int LTR ERVK -1 2325 1 6 1500 506 272 8 53 chr13 119958600 119958732 -325580 - B1_Mur3 SINE Alu -6 143 18 6 1500 26 50 0 0 chr13 119959791 119959831 -324481 + AT_rich Low_complexity Low_complexity 1 40 0 6 1500 22 56 0 0 chr13 119959860 119959896 -324416 + AT_rich Low_complexity Low_complexity 1 36 0 6 1500 180 200 0 0 chr13 119960225 119960275 -324037 + (CA)n Simple_repeat Simple_repeat 1 50 0 6 1500 321 389 40 11 chr13 119960478 119960751 -323561 - L1MC4a LINE L1 -1909 5973 5693 6 1500 349 331 152 44 chr13 119960793 119961182 -323130 - L2 LINE L2 -1386 2033 1603 6 1500 23 54 0 0 chr13 119961249 119961286 -323026 + AT_rich Low_complexity Low_complexity 1 37 0 6 1500 304 272 148 5 chr13 119961319 119961482 -322830 - Lx7 LINE L1 -15 7681 7490 6 1500 318 50 0 0 chr13 119961482 119961522 -322790 + (CAGA)n Simple_repeat Simple_repeat 1 40 0 6 1500 304 272 148 5 chr13 119961522 119961554 -322758 - Lx7 LINE L1 -207 7489 7458 6 1500 819 119 0 0 chr13 119961554 119961680 -322632 + (GGGA)n Simple_repeat Simple_repeat 4 129 0 6 1500 279 0 0 0 chr13 119961696 119961727 -322585 + (CAAG)n Simple_repeat Simple_repeat 1 31 0 6 1500 3096 232 12 20 chr13 119961743 119962308 -322004 - Lx7 LINE L1 -375 7321 6762 6 1500 1625 153 87 38 chr13 119962308 119962674 -321638 - ORR1C2 LTR MaLR 0 384 1 6 1500 3096 232 12 20 chr13 119962674 119962848 -321464 - Lx7 LINE L1 -935 6761 6588 6 1500 243 61 0 0 chr13 119963042 119963075 -321237 + (TG)n Simple_repeat Simple_repeat 1 33 0 6 1500 554 234 0 8 chr13 119963081 119963314 -320998 + (CAGA)n Simple_repeat Simple_repeat 1 231 0 6 1500 791 314 77 58 chr13 119963354 119963628 -320684 - B4 SINE B4 -6 286 8 6 1500 2667 171 16 12 chr13 119963761 119964248 -320064 + RLTR16 LTR ERVK 17 505 0 6 1500 753 132 0 0 chr13 119965786 119965907 -318405 + (TCCC)n Simple_repeat Simple_repeat 1 121 0 6 1500 340 248 18 27 chr13 119967193 119967305 -317007 + CT-rich Low_complexity Low_complexity 3 113 0 6 1500 362 162 0 29 chr13 119967994 119968064 -316248 - L2a LINE L2 -5 3421 3354 6 1500 513 0 0 0 chr13 119969171 119969228 -315084 + (TG)n Simple_repeat Simple_repeat 2 58 0 6 1500 1592 65 4 9 chr13 119969625 119969856 -314456 - L1_Mus1 LINE L1 -413 6154 5925 6 1500 3156 69 0 0 chr13 119969855 119970275 -314037 + L1_Mus1 LINE L1 6123 6542 -25 6 1500 486 0 0 0 chr13 119970278 119970332 -313980 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 6 1500 294 143 0 0 chr13 119970492 119970541 -313771 + (CCA)n Simple_repeat Simple_repeat 1 49 0 6 1500 509 333 38 43 chr13 119970564 119970799 -313513 + B4A SINE B4 46 279 -13 6 1500 696 24 0 0 chr13 119970849 119970931 -313381 + (CA)n Simple_repeat Simple_repeat 1 82 0 6 1500 941 112 128 24 chr13 119971009 119971173 -313139 + B2_Mm2 SINE B2 1 181 -14 6 1500 207 88 0 0 chr13 119971280 119971314 -312998 + (A)n Simple_repeat Simple_repeat 1 34 0 6 1500 597 265 12 12 chr13 119971707 119971879 -312433 + Lx8 LINE L1 7168 7339 -134 6 1500 184 30 0 57 chr13 119971881 119971916 -312396 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 6 1500 7227 70 4 0 chr13 119972037 119973139 -311173 - L1_Mus2 LINE L1 0 6566 5461 6 1500 384 252 10 0 chr13 119973505 119973604 -310708 + RMER1B Other Other 1 100 -966 6 1500 1869 84 14 25 chr13 119973604 119973883 -310429 + IAPEY2_LTR LTR ERVK 19 294 -63 6 1500 2314 56 15 47 chr13 119973925 119974264 -310048 + L1Md_F2 LINE L1 6215 6542 -40 6 1500 396 0 0 0 chr13 119974264 119974308 -310004 + (TAAA)n Simple_repeat Simple_repeat 1 44 0 6 1500 479 114 38 0 chr13 119974323 119974402 -309910 + IAPEY2_LTR LTR ERVK 276 357 0 6 1500 4443 197 72 35 chr13 119974406 119975500 -308812 + RMER1A Other Other 43 913 -117 6 1500 288 0 0 0 chr13 119975500 119975532 -308780 + (TG)n Simple_repeat Simple_repeat 2 33 0 6 1500 4443 179 66 20 chr13 119975532 119975631 -308681 + RMER1A Other Other 914 1019 -11 6 1500 4995 103 13 1 chr13 119975963 119976752 -307560 + L1_Mm LINE L1 3639 4436 -1447 6 1500 36814 8 0 2 chr13 119976753 119982752 -301560 + L1Md_A LINE L1 1 5586 -297 6 1500 9072 2 0 0 chr13 119982752 119983748 -300564 + L1Md_A LINE L1 5587 6582 0 6 1500 5600 101 21 0 chr13 119983750 119984601 -299711 + L1_Mm LINE L1 4430 5298 -585 6 1500 33621 62 2 50 chr13 119984607 119989908 -294404 + L1_Mus1 LINE L1 278 5557 -326 6 1500 7972 43 10 10 chr13 119989908 119990902 -293410 + L1Md_F2 LINE L1 5587 6580 -2 6 1500 33621 52 1 28 chr13 119990902 119992177 -292135 + L1_Mus1 LINE L1 5558 6567 0 6 1500 1090 175 66 5 chr13 119992228 119992440 -291872 - URR1B DNA MER1_type 0 225 1 6 1500 566 278 27 34 chr13 119992487 119992636 -291676 - RSINE1 SINE B4 -15 150 3 6 1500 385 269 107 55 chr13 119992736 119993008 -291304 + L1ME3B LINE L1 5668 5953 -287 6 1500 1283 85 17 0 chr13 119994020 119994196 -290116 + B2_Mm1t SINE B2 1 179 -14 6 1500 455 167 245 29 chr13 119994196 119994360 -289952 + B2_Mm2 SINE B2 2 194 -1 6 1500 462 245 45 45 chr13 119995982 119996136 -288176 + Lx8 LINE L1 6828 6981 -492 6 1500 297 0 0 0 chr13 119996143 119996176 -288136 + (CA)n Simple_repeat Simple_repeat 2 34 0 6 1500 520 128 0 23 chr13 119996212 119996300 -288012 + MTC LTR MaLR 336 421 0 6 1500 5850 127 14 97 chr13 119996361 119996610 -287702 + Lx LINE L1 5587 5836 -818 6 1500 406 196 144 0 chr13 119996610 119996707 -287605 + B1_Mus1 SINE Alu 29 139 -9 6 1500 828 30 0 0 chr13 119996707 119996806 -287506 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 6 1500 5850 127 14 97 chr13 119996806 119997624 -286688 + Lx LINE L1 5837 6654 0 6 1500 184 308 35 78 chr13 119997729 119997845 -286467 + L3 LINE CR1 1612 1722 -2767 6 1500 861 119 13 47 chr13 119998804 119998954 -285358 + B1_Mur3 SINE Alu 5 149 0 6 1500 1757 124 9 61 chr13 119999617 119999944 -284368 - RLTRETN_Mm LTR ERVK -12 310 1 6 1500 646 198 0 31 chr13 120000187 120000317 -283995 - RLTR17 LTR ERVK 0 692 567 1 1500 38036 23 1 6 chr13 120000320 120006446 -277866 - L1Md_T LINE L1 0 6582 495 2 1500 3402 144 45 26 chr13 120006446 120007067 -277245 - RLTR17 LTR ERVK -59 633 1 3 1500 312 332 58 14 chr13 120007181 120007404 -276908 + L1M2 LINE L1 5361 5593 -707 4 1500 192 374 36 36 chr13 120007516 120007710 -276602 + MIRb SINE MIR 72 265 -3 5 1500 181 306 0 75 chr13 120008096 120008163 -276149 - L2a LINE L2 -340 3086 3025 6 1500 380 375 82 31 chr13 120008368 120008756 -275556 - L2a LINE L2 -694 2725 2318 6 1500 626 122 0 0 chr13 120008757 120008847 -275465 - RMER6C LTR ERVK -455 235 146 7 1500 5719 80 5 16 chr13 120008847 120010382 -273930 + L1VL4 LINE L1 187 1699 -1860 8 1500 34655 34 3 8 chr13 120010381 120015575 -268737 + L1Md_T LINE L1 422 5586 -297 9 1500 8314 40 0 2 chr13 120015575 120016573 -267739 + L1Md_T LINE L1 5587 6582 0 9 1500 7779 77 8 7 chr13 120016573 120017717 -266595 + L1VL4 LINE L1 1689 2833 -726 8 1500 459 78 0 0 chr13 120017720 120017784 -266528 + (TC)n Simple_repeat Simple_repeat 2 65 0 1 1500 803 231 9 100 chr13 120018414 120018449 -265863 + B3 SINE B2 2 36 -180 1 1500 7123 47 5 0 chr13 120018449 120019326 -264986 + L1Md_F2 LINE L1 5690 6570 -12 1 1500 803 231 9 100 chr13 120019326 120019521 -264791 + B3 SINE B2 37 211 -5 1 1500 429 20 0 0 chr13 120019991 120020041 -264271 + (TC)n Simple_repeat Simple_repeat 1 50 0 1 1500 213 159 0 0 chr13 120020696 120020740 -263572 + C-rich Low_complexity Low_complexity 2 45 0 1 1500 21 36 0 0 chr13 120020804 120020832 -263480 + AT_rich Low_complexity Low_complexity 1 28 0 1 1500 231 217 0 0 chr13 120024559 120024619 -259693 + T-rich Low_complexity Low_complexity 3 62 0 1 1500 252 260 59 59 chr13 120024939 120025074 -259238 + B1F SINE Alu 1 135 -14 1 1500 675 25 0 0 chr13 120025384 120025465 -258847 + (GA)n Simple_repeat Simple_repeat 2 82 0 1 1500 375 224 45 34 chr13 120025465 120025553 -258759 - MTE2a LTR MaLR -20 339 251 1 1500 1437 232 45 3 chr13 120025607 120025940 -258372 + Lx8 LINE L1 6794 7140 -333 2 1500 624 285 118 55 chr13 120026142 120026413 -257899 - MTE2a LTR MaLR -88 291 4 1 1500 523 293 143 0 chr13 120027918 120028058 -256254 - RSINE1 SINE B4 -2 163 4 2 1500 1172 84 0 0 chr13 120028895 120029049 -255263 + B2_Mm2 SINE B2 1 154 -41 2 1500 497 64 13 0 chr13 120029050 120029128 -255184 + (CATA)n Simple_repeat Simple_repeat 2 80 0 2 1500 581 186 111 52 chr13 120029158 120029311 -255001 + B2_Mm2 SINE B2 2 163 -32 2 1500 523 322 33 0 chr13 120029313 120029493 -254819 + MER2 DNA MER2_type 159 344 -1 2 1500 32 0 0 0 chr13 120029887 120029919 -254393 + AT_rich Low_complexity Low_complexity 1 32 0 2 1500 190 357 75 60 chr13 120030526 120030660 -253652 + L2a LINE L2 2814 2949 -470 2 1500 240 303 226 30 chr13 120030715 120030950 -253362 + L2a LINE L2 3092 3372 -54 2 1500 2087 289 67 30 chr13 120031552 120032356 -251956 + Lx8 LINE L1 6440 7273 -200 2 1500 500 0 0 16 chr13 120032420 120032481 -251831 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 2 1500 22 35 0 0 chr13 120033701 120033730 -250582 + AT_rich Low_complexity Low_complexity 1 29 0 3 1500 240 191 0 0 chr13 120033834 120033876 -250436 + ID2 SINE ID 2 43 -40 3 1500 195 333 53 84 chr13 120034093 120034224 -250088 + L2b LINE L2 3051 3177 -198 3 1500 301 131 43 33 chr13 120034473 120034541 -249771 - B1F SINE Alu -1 148 47 3 1500 434 281 94 73 chr13 120034665 120034899 -249413 + MLT1B LTR MaLR 145 383 -7 3 1500 605 273 43 0 chr13 120035305 120035444 -248868 + B3A SINE B2 7 151 -47 3 1500 513 0 0 0 chr13 120035447 120035504 -248808 + (CA)n Simple_repeat Simple_repeat 2 58 0 3 1500 181 340 0 0 chr13 120036543 120036593 -247719 - L2c LINE L2 -33 3354 3305 3 1500 438 122 46 7 chr13 120037383 120037487 -246825 + MTB_Mm LTR MaLR 313 419 0 3 1500 1378 64 21 21 chr13 120037966 120038157 -246155 - B2_Mm2 SINE B2 -4 191 1 3 1500 2050 186 22 15 chr13 120038767 120039171 -245141 + MTB_Mm LTR MaLR 1 407 0 4 1500 688 165 393 4 chr13 120039399 120039646 -244666 + RMER6D LTR ERVK 1 343 -347 4 1500 200 34 0 33 chr13 120040144 120040174 -244138 + (CAGTC)n Simple_repeat Simple_repeat 1 29 0 4 1500 1115 193 43 48 chr13 120040204 120040599 -243713 + RMER6D LTR ERVK 398 720 0 4 1500 237 329 0 12 chr13 120040599 120040682 -243630 - MLT1A0 LTR MaLR -251 114 33 4 1500 581 271 138 68 chr13 120041881 120042221 -242091 - Lx8 LINE L1 -3 7470 7107 4 1500 2138 317 78 12 chr13 120042258 120043273 -241039 + Lx8 LINE L1 6386 7467 -6 4 1500 2436 78 15 6 chr13 120043304 120043628 -240684 + ORR1A2 LTR MaLR 1 327 0 4 1500 1991 158 122 3 chr13 120043731 120044100 -240212 + MTC LTR MaLR 1 413 -8 4 1500 1395 314 48 18 chr13 120044107 120044928 -239384 - Lx7 LINE L1 -29 7444 6602 4 1500 2403 129 87 5 chr13 120045919 120046308 -238004 - MTC LTR MaLR 0 421 1 4 1500 440 256 11 0 chr13 120046352 120046442 -237870 + B3 SINE B2 1 91 -125 5 1500 256 304 0 48 chr13 120046816 120046899 -237413 + PB1D10 SINE Alu 38 116 -1 5 1500 639 270 49 49 chr13 120046984 120047167 -237145 + ID_B1 SINE B4 3 185 -39 5 1500 261 228 0 0 chr13 120047454 120047533 -236779 + G-rich Low_complexity Low_complexity 3 81 0 5 1500 2775 100 36 10 chr13 120047760 120048173 -236139 + Lx LINE L1 6227 6650 -4 5 1500 306 370 0 0 chr13 120048215 120048307 -236005 + PB1D10 SINE Alu 18 109 -8 5 1500 425 307 115 67 chr13 120048763 120049259 -235053 + Lx9 LINE L1 7077 7596 -48 5 1500 1097 131 23 0 chr13 120050563 120050739 -233573 - URR1B DNA MER1_type 0 225 46 5 1500 540 258 0 84 chr13 120051036 120051167 -233145 + B1_Mur2 SINE Alu 12 131 -18 5 1500 712 192 80 0 chr13 120053763 120053888 -230424 + B1_Mur3 SINE Alu 2 136 -13 5 1500 228 143 0 0 chr13 120053889 120053931 -230381 + (GGA)n Simple_repeat Simple_repeat 1 42 0 6 1500 222 342 47 30 chr13 120054097 120054223 -230089 - MIR3 SINE MIR -16 192 62 6 1500 1715 21 0 0 chr13 120054336 120054528 -229784 + B2_Mm1t SINE B2 1 192 -1 6 1500 25 31 0 0 chr13 120054847 120054879 -229433 + AT_rich Low_complexity Low_complexity 1 32 0 6 1500 1508 263 27 29 chr13 120054909 120055355 -228957 - Lx8 LINE L1 -433 7040 6596 6 1500 423 306 55 37 chr13 120055348 120055511 -228801 + Lx8 LINE L1 7106 7271 -202 6 1500 693 0 0 0 chr13 120055552 120055629 -228683 + (GAAA)n Simple_repeat Simple_repeat 3 79 0 6 1500 1062 0 0 0 chr13 120055629 120055746 -228566 + (GGGA)n Simple_repeat Simple_repeat 4 121 0 6 1500 413 289 58 5 chr13 120055880 120056068 -228244 - L1MA8 LINE L1 -56 6235 6038 6 1500 256 373 0 18 chr13 120056919 120057031 -227281 + MIR SINE MIR 30 139 -69 6 1500 344 316 88 12 chr13 120057227 120057387 -226925 + MIRm SINE MIR 2 173 -103 6 1500 279 0 0 0 chr13 120057659 120057690 -226622 + (A)n Simple_repeat Simple_repeat 1 31 0 7 1500 766 293 28 5 chr13 120057907 120058123 -226189 - ID_B1 SINE B4 0 224 4 7 1500 822 73 0 0 chr13 120058258 120058368 -225944 + (CTG)n Simple_repeat Simple_repeat 3 112 0 7 1500 401 274 152 8 chr13 120058396 120058514 -225798 + B1_Mur1 SINE Alu 15 149 0 7 1500 233 267 0 0 chr13 120058519 120058564 -225748 + polypurine Low_complexity Low_complexity 3 47 0 7 1500 217 281 0 45 chr13 120058564 120058631 -225681 + B4A SINE B4 82 145 -147 7 1500 316 330 0 60 chr13 120058579 120058695 -225617 + PB1D10 SINE Alu 9 117 0 7 1500 523 186 133 17 chr13 120059918 120060038 -224274 + B1F SINE Alu 12 145 -4 7 1500 261 0 0 0 chr13 120060650 120060679 -223633 + (CA)n Simple_repeat Simple_repeat 2 30 0 7 1500 508 238 50 26 chr13 120061408 120061632 -222680 - L1MA4A LINE L1 -281 6019 5787 7 1501 341 214 40 57 chr13 120062874 120062998 -221314 + L1M3 LINE L1 4544 4665 -1475 8 1501 1871 238 19 5 chr13 120062998 120063411 -220901 - MTD LTR MaLR 0 419 1 8 1501 657 303 24 7 chr13 120063450 120063746 -220566 + L1_Mur3 LINE L1 4699 4999 -881 8 1501 792 167 0 0 chr13 120065864 120066008 -218304 + A-rich Low_complexity Low_complexity 3 146 0 8 1501 558 43 0 0 chr13 120067722 120067791 -216521 + (TC)n Simple_repeat Simple_repeat 1 69 0 8 1501 414 0 0 0 chr13 120067791 120067836 -216476 + (CA)n Simple_repeat Simple_repeat 1 46 0 8 1501 573 72 0 0 chr13 120069770 120069853 -214459 + (GA)n Simple_repeat Simple_repeat 2 84 0 8 1501 576 311 11 27 chr13 120070283 120070468 -213844 + B3A SINE B2 1 182 -16 8 1501 820 262 114 17 chr13 120070795 120071032 -213280 - B4 SINE B4 -3 289 30 8 1501 42 57 0 0 chr13 120072976 120073046 -211266 + AT_rich Low_complexity Low_complexity 1 70 0 8 1501 207 327 105 13 chr13 120073188 120073340 -210972 + L2 LINE L2 2708 2873 -546 9 1501 1187 106 5 32 chr13 120073361 120073547 -210765 + B2_Mm2 SINE B2 9 189 -6 9 1501 1765 235 34 26 chr13 120074726 120075110 -209202 - RMER19B LTR ERVK 0 902 516 9 1501 258 105 0 0 chr13 120075110 120075148 -209164 + (T)n Simple_repeat Simple_repeat 1 38 0 9 1501 7198 70 4 19 chr13 120075215 120076915 -207397 - L1Md_F2 LINE L1 -12 6570 4892 9 1501 701 58 29 10 chr13 120076906 120077010 -207302 - L1_Mm LINE L1 -1155 4728 4623 9 1501 7235 33 1 0 chr13 120077008 120077906 -206406 + L1_Mm LINE L1 4801 5699 -184 9 1501 7523 63 5 1 chr13 120077905 120078913 -205399 + L1Md_F2 LINE L1 4575 5586 -297 9 1501 8024 50 2 1 chr13 120078914 120079907 -204405 + L1Md_F2 LINE L1 5588 6581 -1 9 1501 6717 44 6 7 chr13 120079918 120080793 -203519 + L1Md_F2 LINE L1 5684 6557 -25 9 1501 220 27 54 0 chr13 120080796 120080833 -203479 + (TAAAA)n Simple_repeat Simple_repeat 4 42 0 9 1501 1550 264 21 13 chr13 120081194 120081581 -202731 + Lx9 LINE L1 6312 6701 -943 9 1501 1278 176 14 0 chr13 120082125 120082347 -201965 + URR1B DNA MER1_type 1 225 0 9 1501 21 0 0 0 chr13 120082383 120082404 -201908 + AT_rich Low_complexity Low_complexity 1 21 0 1 1501 632 188 1 31 chr13 120082404 120082565 -201747 + L1_Mur3 LINE L1 3264 3416 -498 1 1501 878 137 99 0 chr13 120082600 120082761 -201551 + URR1B DNA MER1_type 49 225 0 9 1501 6664 147 61 54 chr13 120082765 120083625 -200687 + L1_Mur3 LINE L1 3422 4283 -1597 1 1501 2610 43 65 0 chr13 120083625 120083949 -200363 - ORR1A1 LTR MaLR -1 345 1 1 1501 6664 147 61 54 chr13 120083949 120084574 -199738 + L1_Mur3 LINE L1 4284 4918 -962 1 1501 446 154 36 16 chr13 120084577 120084777 -199535 + (TA)n Simple_repeat Simple_repeat 1 204 0 1 1501 666 125 8 32 chr13 120084777 120084901 -199411 + L1_Mur3 LINE L1 4921 5041 -839 1 1501 3950 200 63 129 chr13 120084901 120086087 -198225 + Lx6 LINE L1 6217 7324 -136 1 1501 3508 63 0 0 chr13 120086099 120086544 -197768 - RLTR13B1 LTR ERVK -100 793 349 1 1501 3439 20 7 5 chr13 120086552 120086956 -197356 - L1Md_F3 LINE L1 -15 6569 6165 1 1501 612 158 23 0 chr13 120086957 120087090 -197222 + Lx6 LINE L1 7314 7449 -11 1 1501 661 272 11 43 chr13 120087113 120087301 -197011 - B3A SINE B2 -16 182 1 1 1501 895 283 94 35 chr13 120087381 120087649 -196663 - L1M2 LINE L1 -2949 3194 2929 1 1501 339 25 0 0 chr13 120087649 120087689 -196623 + (TA)n Simple_repeat Simple_repeat 2 41 0 1 1501 989 73 58 14 chr13 120087689 120087828 -196484 - B1_Mus1 SINE Alu 0 148 4 1 1501 895 283 94 35 chr13 120087828 120088302 -196010 - L1M2 LINE L1 -3215 2928 2408 1 1501 792 153 143 0 chr13 120088476 120088672 -195640 - Lx9 LINE L1 -20 7624 7401 1 1501 402 85 0 0 chr13 120090075 120090134 -194178 + (TG)n Simple_repeat Simple_repeat 2 60 0 1 1501 1007 317 7 20 chr13 120090151 120090447 -193865 - B4 SINE B4 0 292 1 1 1501 566 301 6 73 chr13 120090855 120091034 -193278 + RMER19B LTR ERVK 1 167 -735 1 1501 1936 307 4 50 chr13 120091017 120091480 -192832 + RMER19B LTR ERVK 47 488 -414 1 1501 33843 75 5 5 chr13 120091512 120097667 -186645 + L1Md_F2 LINE L1 446 6582 0 1 1501 7620 57 0 1 chr13 120097667 120097686 -186626 + L1Md_F2 LINE L1 6561 6579 -3 1 1501 1483 252 90 19 chr13 120097689 120098279 -186033 - L1MA6 LINE L1 -154 6146 5515 1 1501 1747 151 134 17 chr13 120098308 120098652 -185660 - ORR1C2 LTR MaLR 0 384 1 1 1501 185 324 40 13 chr13 120098862 120098937 -185375 - MIR SINE MIR -84 178 102 1 1501 22 35 0 0 chr13 120099165 120099194 -185118 + AT_rich Low_complexity Low_complexity 1 29 0 1 1501 4326 72 17 2 chr13 120099271 120099859 -184453 + Lx3_Mus LINE L1 6397 6993 -16 1 1501 231 300 32 45 chr13 120099875 120100032 -184280 + L1MA4A LINE L1 5037 5191 -952 1 1501 463 167 56 98 chr13 120100033 120100207 -184105 + ORR1C1 LTR MaLR 1 142 -217 1 1501 736 320 42 13 chr13 120100257 120100640 -183672 + L1MA4A LINE L1 5384 5777 -514 1 1501 378 0 0 0 chr13 120100791 120100833 -183479 + (TG)n Simple_repeat Simple_repeat 2 43 0 1 1501 623 218 20 9 chr13 120101208 120101388 -182924 + L1MA4A LINE L1 5770 5954 -346 1 1501 435 100 0 0 chr13 120101388 120101458 -182854 + (TG)n Simple_repeat Simple_repeat 2 71 0 1 1501 565 241 57 57 chr13 120101458 120101541 -182771 + L1MA4A LINE L1 5955 6033 -267 1 1501 907 260 30 69 chr13 120101725 120101805 -182507 + ORR1D2 LTR MaLR 1 86 -284 1 1501 2511 23 13 7 chr13 120101805 120102112 -182200 + L1Md_F3 LINE L1 6262 6570 -14 1 1501 907 260 30 69 chr13 120102112 120102262 -182050 + ORR1D2 LTR MaLR 87 222 -148 1 1501 216 346 0 13 chr13 120102315 120102394 -181918 - L2c LINE L2 -5 3382 3305 1 1501 966 116 0 0 chr13 120102581 120102728 -181584 + (GAAA)n Simple_repeat Simple_repeat 1 147 0 1 1501 650 326 204 17 chr13 120102731 120103437 -180875 + L2 LINE L2 923 1760 -1659 1 1501 277 301 196 25 chr13 120103451 120103686 -180626 + L2 LINE L2 2103 2377 -1042 1 1501 414 0 0 0 chr13 120103912 120103958 -180354 + (TG)n Simple_repeat Simple_repeat 2 47 0 1 1501 213 344 41 10 chr13 120104349 120104446 -179866 - L2c LINE L2 -297 3090 2991 1 1501 344 273 59 29 chr13 120105188 120105290 -179022 + PB1D10 SINE Alu 13 117 0 1 1501 311 167 15 0 chr13 120105355 120105421 -178891 + GA-rich Low_complexity Low_complexity 4 70 0 1 1501 2464 116 3 8 chr13 120105618 120105984 -178328 + MTC LTR MaLR 5 368 -53 1 1501 330 354 106 11 chr13 120106438 120106618 -177694 + MIRc SINE MIR 21 217 -51 1 1501 1046 188 10 10 chr13 120106727 120106921 -177391 + ORR1A4 LTR MaLR 1 194 -135 1 1501 288 409 26 0 chr13 120107970 120108085 -176227 + Tigger13a DNA MER2_type 50 167 -604 1 1501 184 354 52 0 chr13 120109540 120109636 -174676 + L3 LINE CR1 3598 3698 -791 1 1501 437 357 84 0 chr13 120109996 120110139 -174173 + B3A SINE B2 6 160 -38 1 1501 504 0 0 0 chr13 120110477 120110533 -173779 + (GA)n Simple_repeat Simple_repeat 1 56 0 1 1501 255 170 0 0 chr13 120110722 120110769 -173543 + GA-rich Low_complexity Low_complexity 3 49 0 1 1501 451 307 15 38 chr13 120112627 120112759 -171553 - ID_B1 SINE B4 -15 209 81 1 1501 669 189 95 86 chr13 120112779 120112926 -171386 + MER44A DNA MER2_type 102 229 -110 1 1501 516 16 0 0 chr13 120112926 120112987 -171325 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 1 1501 669 189 95 86 chr13 120112987 120113003 -171309 + MER44A DNA MER2_type 230 261 -78 1 1501 480 18 0 0 chr13 120113003 120113060 -171252 + (TG)n Simple_repeat Simple_repeat 1 57 0 1 1501 669 189 95 86 chr13 120113060 120113127 -171185 + MER44A DNA MER2_type 262 334 -5 1 1501 421 267 44 0 chr13 120113354 120113444 -170868 + PB1 SINE Alu 4 97 -30 1 1501 734 84 9 0 chr13 120113478 120113585 -170727 + (TC)n Simple_repeat Simple_repeat 2 109 0 1 1501 358 330 66 0 chr13 120114365 120114456 -169856 - PB1 SINE Alu -30 97 1 1 1501 225 219 0 30 chr13 120114561 120114627 -169685 + A-rich Low_complexity Low_complexity 3 66 0 1 1501 227 206 32 0 chr13 120114744 120114807 -169505 + (CATAA)n Simple_repeat Simple_repeat 5 69 0 1 1501 352 331 21 97 chr13 120114807 120114888 -169424 - MLT1H2 LTR MaLR -268 221 144 1 1501 1311 87 60 0 chr13 120114888 120115072 -169240 + B2_Mm2 SINE B2 1 195 0 1 1501 352 331 21 97 chr13 120115072 120115134 -169178 - MLT1H2 LTR MaLR -346 143 89 1 1501 22 70 0 0 chr13 120115362 120115405 -168907 + AT_rich Low_complexity Low_complexity 1 43 0 1 1501 280 330 98 87 chr13 120115565 120115910 -168402 - MLT2F LTR ERVL -294 369 27 1 1501 22 0 0 0 chr13 120116169 120116191 -168121 + AT_rich Low_complexity Low_complexity 1 22 0 1 1501 496 335 12 0 chr13 120116244 120116405 -167907 + RSINE1 SINE B4 3 165 0 1 1501 901 0 18 0 chr13 120116454 120116563 -167749 + (TAGA)n Simple_repeat Simple_repeat 2 112 0 1 1501 21 57 0 0 chr13 120116592 120116627 -167685 + AT_rich Low_complexity Low_complexity 1 35 0 1 1501 611 252 7 15 chr13 120116627 120116764 -167548 + B3A SINE B2 1 136 -62 1 1501 1106 215 50 4 chr13 120116766 120117027 -167285 + Lx8 LINE L1 6273 6545 -928 1 1501 326 336 9 9 chr13 120118420 120118528 -165784 + MamGypLTR2b LTR Gypsy 798 905 -17 1 1501 313 271 240 0 chr13 120118722 120118851 -165461 + RSINE1 SINE B4 2 161 -4 1 1501 1165 259 82 36 chr13 120119180 120119572 -164740 - MTD LTR MaLR 0 419 10 1 1501 623 284 122 14 chr13 120119726 120120005 -164307 + MT2A LTR ERVL 225 533 0 1 1501 1829 145 3 80 chr13 120120073 120120425 -163887 - ORR1A4 LTR MaLR -2 327 3 1 1501 360 0 0 0 chr13 120121550 120121590 -162722 + (CA)n Simple_repeat Simple_repeat 2 41 0 1 1501 21 0 0 0 chr13 120122085 120122106 -162206 + AT_rich Low_complexity Low_complexity 1 21 0 1 1501 455 291 51 22 chr13 120122194 120122331 -161981 - B1F SINE Alu 0 149 9 1 1501 319 238 51 30 chr13 120122533 120122632 -161680 - PB1D10 SINE Alu -7 110 8 1 1501 555 240 50 68 chr13 120123266 120123427 -160885 - MER20 DNA MER1_type -50 169 12 1 1501 257 247 38 25 chr13 120123654 120123733 -160579 + CT-rich Low_complexity Low_complexity 5 84 0 1 1501 263 232 143 14 chr13 120123875 120123945 -160367 - ID4_ SINE ID -4 79 1 1 1501 235 277 93 51 chr13 120125317 120125553 -158759 - L1MA6 LINE L1 0 6300 6055 1 1501 306 0 0 0 chr13 120126360 120126394 -157918 + (TTTTA)n Simple_repeat Simple_repeat 4 37 0 1 1501 639 175 9 0 chr13 120126451 120126565 -157747 - B3A SINE B2 -82 116 2 1 1501 279 301 0 0 chr13 120128077 120128150 -156162 + GA-rich Low_complexity Low_complexity 3 75 0 1 1501 297 0 0 0 chr13 120128590 120128623 -155689 + (CA)n Simple_repeat Simple_repeat 1 33 0 1 1501 1491 273 25 64 chr13 120129793 120130359 -153953 + Lx7 LINE L1 6819 7333 -363 1 1501 670 277 29 29 chr13 120130724 120130895 -153417 + B3A SINE B2 1 171 -27 1 1501 2103 166 13 53 chr13 120132191 120132529 -151783 + ORR1C1 LTR MaLR 1 338 -40 1 1501 3273 6 0 0 chr13 120132529 120132894 -151418 + L1Md_A LINE L1 6218 6582 0 1 1501 2103 166 13 53 chr13 120132894 120132949 -151363 + ORR1C1 LTR MaLR 339 378 0 1 1501 980 203 58 0 chr13 120134553 120134760 -149552 + Lx6 LINE L1 7216 7434 -26 1 1501 207 0 0 0 chr13 120134796 120134819 -149493 + (GA)n Simple_repeat Simple_repeat 2 24 0 1 1501 476 245 105 13 chr13 120134837 120134990 -149322 + MER54A LTR ERVL 1 167 -734 1 1501 584 376 38 17 chr13 120135000 120135287 -149025 + MER54A LTR ERVL 279 571 -330 1 1501 1177 164 87 0 chr13 120135285 120135493 -148819 + RMER6D LTR ERVK 488 713 -7 1 1501 743 170 1 3 chr13 120136635 120136757 -147555 - B3 SINE B2 -73 120 1 1 1501 390 21 0 0 chr13 120136816 120136863 -147449 + (TGAG)n Simple_repeat Simple_repeat 3 49 0 1 1501 180 152 0 0 chr13 120137097 120137130 -147182 + G-rich Low_complexity Low_complexity 5 37 0 1 1501 324 0 0 0 chr13 120137160 120137196 -147116 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1 1501 895 197 0 123 chr13 120137303 120137506 -146806 + ORR1D1 LTR MaLR 4 181 -193 1 1501 604 182 15 0 chr13 120137506 120137638 -146674 + CT-rich Low_complexity Low_complexity 1 134 0 1 1501 884 221 58 29 chr13 120137642 120137847 -146465 + ORR1D1 LTR MaLR 174 384 0 1 1501 289 250 53 0 chr13 120137859 120137935 -146377 + L2a LINE L2 3335 3414 -12 1 1501 5502 75 28 3 chr13 120137979 120138736 -145576 + L1_Mus4 LINE L1 5861 6636 0 1 1501 185 310 34 17 chr13 120139268 120139327 -144985 + L2c LINE L2 3298 3357 -30 1 1501 927 179 0 0 chr13 120139378 120139557 -144755 + GA-rich Low_complexity Low_complexity 2 180 0 1 1501 788 226 122 16 chr13 120139559 120139748 -144564 + B3 SINE B2 3 211 -5 1 1501 21 36 0 0 chr13 120140592 120140620 -143692 + AT_rich Low_complexity Low_complexity 1 28 0 1 1501 306 0 0 0 chr13 120140631 120140665 -143647 + (TG)n Simple_repeat Simple_repeat 2 35 0 1 1501 626 200 0 16 chr13 120141398 120141581 -142731 + (TG)n Simple_repeat Simple_repeat 1 180 0 1 1501 439 239 0 25 chr13 120141555 120141718 -142594 + (TATATG)n Simple_repeat Simple_repeat 6 164 0 2 1501 322 250 0 11 chr13 120141725 120141818 -142494 + (TG)n Simple_repeat Simple_repeat 1 92 0 2 1501 881 288 35 31 chr13 120141821 120142111 -142201 - B4 SINE B4 0 292 2 2 1501 443 224 15 0 chr13 120145086 120145220 -139092 + Lx9 LINE L1 6897 7032 -612 2 1501 1120 295 81 27 chr13 120145534 120146088 -138224 + Lx8 LINE L1 6709 7292 -181 2 1501 2192 154 93 10 chr13 120147390 120147777 -136535 - MTD LTR MaLR 0 419 1 2 1501 250 305 168 43 chr13 120148402 120148611 -135701 + B4A SINE B4 1 235 -57 2 1501 393 22 0 0 chr13 120149190 120149236 -135076 + (TAAAA)n Simple_repeat Simple_repeat 4 49 0 2 1501 373 386 7 13 chr13 120150905 120151060 -133252 - ID_B1 SINE B4 -3 221 68 2 1501 592 248 15 46 chr13 120151079 120151210 -133102 - B1_Mur1 SINE Alu -21 128 2 2 1501 820 90 16 16 chr13 120151351 120151475 -132837 + B1_Mus2 SINE Alu 24 147 0 2 1501 198 103 0 0 chr13 120151475 120151504 -132808 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 2 1501 1274 110 10 5 chr13 120151843 120152035 -132277 + B2_Mm1t SINE B2 1 193 0 2 1501 666 183 0 9 chr13 120152163 120152279 -132033 + PB1D10 SINE Alu 2 116 -1 2 1501 732 101 0 0 chr13 120152831 120152960 -131352 + (TG)n Simple_repeat Simple_repeat 2 130 0 2 1501 692 335 99 2 chr13 120152960 120153364 -130948 + Lx8 LINE L1 6887 7329 -144 2 1501 266 0 29 0 chr13 120153503 120153537 -130775 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2 1501 935 203 78 0 chr13 120153548 120153740 -130572 + B3 SINE B2 3 209 -7 2 1501 451 259 26 8 chr13 120153761 120153878 -130434 + ID_B1 SINE B4 80 198 -26 2 1501 719 165 0 0 chr13 120153775 120153884 -130428 + B1_Mus2 SINE Alu 16 124 -23 2 1501 333 0 0 0 chr13 120153897 120153934 -130378 + (TA)n Simple_repeat Simple_repeat 2 38 0 2 1501 1193 108 51 14 chr13 120154327 120154544 -129768 + Lx3A LINE L1 6635 6859 -122 2 1501 224 261 31 52 chr13 120154699 120154796 -129516 + PB1 SINE Alu 22 116 -11 2 1501 344 306 58 78 chr13 120155442 120155839 -128473 + L1MEb LINE L1 16 404 -5666 2 1501 37 23 0 0 chr13 120155951 120155995 -128317 + AT_rich Low_complexity Low_complexity 1 44 0 2 1501 24 67 0 0 chr13 120156333 120156378 -127934 + AT_rich Low_complexity Low_complexity 1 45 0 2 1501 1022 81 122 39 chr13 120158194 120158374 -125938 - B2_Mm2 SINE B2 0 195 1 2 1501 819 219 7 0 chr13 120159709 120159860 -124452 - B3A SINE B2 -46 152 1 2 1501 860 276 179 28 chr13 120159860 120160457 -123855 - MER63C DNA AcHobo -133 797 128 2 1501 207 0 0 0 chr13 120160468 120160491 -123821 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 2 1501 877 131 29 0 chr13 120160491 120160628 -123684 - B1_Mur4 SINE Alu -1 149 9 2 1501 399 262 20 110 chr13 120160525 120160671 -123641 - MT2B LTR ERVL -337 264 132 2 1501 270 194 0 46 chr13 120160635 120160700 -123612 - MER63C DNA AcHobo -824 106 45 2 1501 207 0 0 0 chr13 120161431 120161454 -122858 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1501 1134 114 11 11 chr13 120161574 120161751 -122561 + B2_Mm1t SINE B2 3 179 -14 2 1501 1228 35 0 0 chr13 120162365 120162506 -121806 - B1_Mus1 SINE Alu -7 141 1 2 1501 868 270 63 45 chr13 120162533 120162820 -121492 - B4 SINE B4 0 292 1 2 1501 1326 143 28 0 chr13 120162828 120163045 -121267 + URR1B DNA MER1_type 3 225 0 2 1501 231 304 104 0 chr13 120163139 120163254 -121058 - MIRc SINE MIR -16 252 126 2 1501 23 0 0 0 chr13 120165069 120165092 -119220 + AT_rich Low_complexity Low_complexity 1 23 0 2 1501 250 330 0 9 chr13 120165674 120165784 -118528 + GA-rich Low_complexity Low_complexity 3 111 0 2 1501 410 316 46 82 chr13 120166051 120166137 -118175 - B4A SINE B4 0 292 217 2 1501 207 0 0 0 chr13 120166137 120166160 -118152 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2 1501 410 316 46 82 chr13 120166160 120166376 -117936 - B4A SINE B4 -76 216 1 2 1501 1334 73 67 0 chr13 120166814 120166993 -117319 + B2_Mm2 SINE B2 2 192 -3 2 1501 224 200 18 0 chr13 120167050 120167105 -117207 + G-rich Low_complexity Low_complexity 1 56 0 2 1501 228 183 78 62 chr13 120167107 120167171 -117141 - YREP_Mm Unknown Unknown -1498 314 250 2 1501 517 194 32 0 chr13 120167123 120167216 -117096 + PB1D10 SINE Alu 22 117 0 2 1501 1595 247 46 23 chr13 120167781 120168220 -116092 + RCHARR1 DNA MER1_type 518 966 -8 2 1501 567 221 129 31 chr13 120168520 120168683 -115629 + B3A SINE B2 2 180 -18 2 1501 1630 26 21 0 chr13 120168879 120169068 -115244 - B2_Mm1t SINE B2 0 193 1 2 1501 809 59 246 0 chr13 120169642 120169760 -114552 + B1_Mm SINE Alu 1 147 0 2 1501 1865 179 71 33 chr13 120169959 120170352 -113960 + MTD LTR MaLR 12 419 0 2 1501 1091 120 185 0 chr13 120170755 120170939 -113373 - URR1B DNA MER1_type -4 221 4 2 1501 1517 72 0 10 chr13 120171171 120171367 -112945 + B2_Mm2 SINE B2 2 195 0 2 1501 1128 274 65 112 chr13 120172047 120172726 -111586 + Lx7 LINE L1 7050 7696 0 2 1501 283 261 11 0 chr13 120172731 120172819 -111493 + Lx7 LINE L1 5781 5869 -1827 2 1501 1397 181 128 77 chr13 120173282 120173522 -110790 - ORR1D1 LTR MaLR -2 372 99 2 1501 1209 41 0 7 chr13 120173522 120173670 -110642 + B1_Mus1 SINE Alu 2 148 0 2 1501 1397 181 128 77 chr13 120173670 120173781 -110531 - ORR1D1 LTR MaLR -276 98 3 2 1501 296 213 16 16 chr13 120174252 120174314 -109998 + tRNA-Ala-GCY_ tRNA tRNA 6 67 -8 2 1501 210 71 0 0 chr13 120174471 120174499 -109813 + (T)n Simple_repeat Simple_repeat 1 28 0 2 1501 1237 47 0 0 chr13 120174499 120174647 -109665 - B1_Mus1 SINE Alu 0 148 1 2 1501 228 266 24 48 chr13 120174876 120174959 -109353 + ID4 SINE ID 3 83 0 2 1501 24 0 0 0 chr13 120176265 120176289 -108023 + AT_rich Low_complexity Low_complexity 1 24 0 2 1501 299 300 100 83 chr13 120176427 120176547 -107765 - RSINE1 SINE B4 -20 145 24 2 1501 1053 141 20 50 chr13 120177699 120177900 -106412 + B2_Mm2 SINE B2 1 195 0 2 1501 536 29 14 0 chr13 120177906 120177976 -106336 + (TG)n Simple_repeat Simple_repeat 1 71 0 2 1501 207 0 0 0 chr13 120178092 120178115 -106197 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1501 235 412 48 0 chr13 120178203 120178368 -105944 - MIR SINE MIR -46 216 44 2 1501 191 395 37 7 chr13 120178706 120178841 -105471 + MIR SINE MIR 118 256 -6 2 1501 273 246 0 0 chr13 120179604 120179665 -104647 - B4 SINE B4 -18 274 214 2 1501 428 287 9 0 chr13 120179685 120179800 -104512 - B4A SINE B4 -176 116 1 2 1501 384 166 37 22 chr13 120179939 120180060 -104252 + RSINE1 SINE B4 2 124 -168 2 1501 186 43 0 0 chr13 120180568 120180591 -103721 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2 1501 1278 113 6 0 chr13 120180593 120180770 -103542 - B2_Mm1t SINE B2 -15 178 1 2 1501 1204 289 80 23 chr13 120180820 120181334 -102978 - L1M2 LINE L1 -925 5218 4676 2 1501 681 47 0 0 chr13 120181360 120181445 -102867 + (TA)n Simple_repeat Simple_repeat 1 85 0 2 1501 1186 293 39 21 chr13 120181525 120181929 -102383 + Lx8 LINE L1 6561 6980 -493 2 1501 361 182 315 51 chr13 120182076 120182273 -102039 + Lx8 LINE L1 7220 7468 -5 2 1501 234 373 39 19 chr13 120182522 120182626 -101686 + PB1 SINE Alu 3 108 -19 2 1501 216 97 0 0 chr13 120182633 120182664 -101648 + (TTAA)n Simple_repeat Simple_repeat 1 31 0 2 1501 411 191 36 54 chr13 120183986 120184097 -100215 + B1_Mur1 SINE Alu 40 148 -1 2 1501 222 37 0 0 chr13 120184400 120184427 -99885 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2 1501 411 160 0 188 chr13 120185227 120185381 -98931 + L1MA5 LINE L1 6176 6300 0 2 1501 575 170 75 0 chr13 120185407 120185513 -98799 + PB1D9 SINE Alu 2 115 -5 2 1501 1739 189 89 8 chr13 120186415 120186798 -97514 + MTD LTR MaLR 6 419 0 2 1501 1113 85 89 17 chr13 120187014 120187193 -97119 + B2_Mm1a SINE B2 2 193 0 2 1501 23 0 0 0 chr13 120187407 120187430 -96882 + GC_rich Low_complexity Low_complexity 1 23 0 2 1501 754 168 15 0 chr13 120187434 120187565 -96747 - B1_Mur3 SINE Alu -16 133 1 2 1501 1124 49 28 7 chr13 120187825 120187970 -96342 + B1_Mus1 SINE Alu 1 148 0 2 1501 204 40 0 0 chr13 120188000 120188025 -96287 + (GA)n Simple_repeat Simple_repeat 2 26 0 2 1501 732 200 0 0 chr13 120188191 120188326 -95986 + B1_Mur1 SINE Alu 15 149 0 2 1501 618 227 82 21 chr13 120188410 120188582 -95730 + B3 SINE B2 31 195 0 2 1501 1023 65 0 0 chr13 120188618 120188756 -95556 + B1_Mm SINE Alu 10 147 0 2 1501 186 43 0 0 chr13 120188756 120188779 -95533 + (A)n Simple_repeat Simple_repeat 1 23 0 2 1501 264 317 60 109 chr13 120188887 120189071 -95241 + MLT1E2 LTR MaLR 2 176 -451 2 1501 230 250 0 0 chr13 120189267 120189319 -94993 + MLT1E2 LTR MaLR 576 627 0 2 1501 454 274 69 59 chr13 120189322 120189524 -94788 + L1MC5 LINE L1 6995 7198 -763 2 1501 188 35 35 0 chr13 120189716 120189745 -94567 + (CAAAAA)n Simple_repeat Simple_repeat 1 30 0 2 1501 1227 65 18 0 chr13 120190042 120190212 -94100 + B2_Mm2 SINE B2 1 173 -22 2 1501 1503 152 155 3 chr13 120190238 120190541 -93771 + ORR1B1 LTR MaLR 46 394 0 2 1501 629 243 0 27 chr13 120190637 120190785 -93527 + B1_Mur2 SINE Alu 1 144 -5 2 1501 240 314 35 0 chr13 120191283 120191369 -92943 + MLT1J LTR MaLR 40 128 -384 2 1501 359 355 76 12 chr13 120191510 120191761 -92551 - L2 LINE L2 -482 2937 2671 2 1501 776 256 11 0 chr13 120191768 120191941 -92371 + B3A SINE B2 1 175 -23 2 1501 678 117 0 0 chr13 120191941 120192052 -92260 + (TAGA)n Simple_repeat Simple_repeat 4 114 0 3 1501 2264 146 45 26 chr13 120192421 120192843 -91469 + RLTR20B2 LTR ERVK 1 430 -130 3 1501 243 0 0 0 chr13 120192859 120192886 -91426 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 3 187 1129 76 7 0 chr13 120192886 120193031 -91281 - B1_Mm SINE Alu 0 147 2 3 1502 624 194 0 0 chr13 120193031 120193139 -91173 + RLTR20B2 LTR ERVK 419 526 -34 3 1502 813 100 0 0 chr13 120193848 120193978 -90334 + (TG)n Simple_repeat Simple_repeat 2 131 0 3 1502 630 113 0 0 chr13 120194242 120194339 -89973 + (GA)n Simple_repeat Simple_repeat 2 98 0 3 1502 265 307 0 0 chr13 120195680 120195755 -88557 - ID2 SINE ID -6 77 3 3 1502 1338 129 22 22 chr13 120195782 120196004 -88308 + URR1A DNA MER1_type 2 223 -3 3 1502 212 237 190 25 chr13 120196071 120196192 -88120 + MIR SINE MIR 48 188 -74 3 1502 24 0 0 0 chr13 120196494 120196518 -87794 + AT_rich Low_complexity Low_complexity 1 24 0 3 1502 532 200 19 70 chr13 120196534 120196690 -87622 + B1F1 SINE Alu 1 148 -1 3 1502 192 77 0 0 chr13 120198659 120198685 -85627 + (CTTG)n Simple_repeat Simple_repeat 2 27 0 3 1502 1636 32 0 0 chr13 120198689 120198877 -85435 - B2_Mm1a SINE B2 -5 188 1 3 1502 1345 243 34 44 chr13 120199521 120199756 -84556 - L1_Rod LINE L1 -30 5817 5587 3 1502 1896 169 47 55 chr13 120199756 120200137 -84175 - ORR1C1 LTR MaLR 0 378 1 3 1502 1345 243 34 44 chr13 120200137 120200288 -84024 - L1_Rod LINE L1 -261 5586 5435 3 1502 1834 172 132 10 chr13 120200488 120200881 -83431 + BGLII_B LTR ERVK 1 441 0 3 1502 544 200 112 30 chr13 120201031 120201165 -83147 + B1F SINE Alu 5 149 0 3 1502 261 109 0 0 chr13 120201186 120201232 -83080 + (A)n Simple_repeat Simple_repeat 1 46 0 3 1502 227 258 196 33 chr13 120202243 120202335 -81977 + PB1D7 SINE Alu 4 110 -10 3 1502 724 31 31 0 chr13 120202335 120202433 -81879 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 3 1502 850 275 142 52 chr13 120202457 120202902 -81410 + L1MD1 LINE L1 5593 6077 -165 3 1502 1752 124 27 68 chr13 120202903 120203241 -81071 - RLTR23 LTR ERV1 0 430 107 3 1502 252 0 0 0 chr13 120203282 120203310 -81002 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 3 1502 324 121 227 0 chr13 120203390 120203456 -80856 - RLTR23 LTR ERV1 -325 105 25 3 1502 313 298 32 16 chr13 120203467 120203590 -80722 + L1MD1 LINE L1 6116 6240 -2 3 1502 281 221 23 4 chr13 120204661 120204752 -79560 + ORR1E LTR MaLR 256 368 -11 3 1502 1774 134 92 0 chr13 120204843 120205178 -79134 - ORR1D1 LTR MaLR -8 366 1 3 1502 886 169 6 35 chr13 120205302 120205474 -78838 + URR1A DNA MER1_type 60 226 0 3 1502 198 0 0 0 chr13 120205492 120205514 -78798 + (A)n Simple_repeat Simple_repeat 1 22 0 3 1502 468 123 0 0 chr13 120205880 120205953 -78359 + (TC)n Simple_repeat Simple_repeat 2 74 0 3 1502 327 202 122 11 chr13 120205957 120206047 -78265 - MLT1A0 LTR MaLR -204 161 62 3 1502 734 238 46 5 chr13 120206872 120207066 -77246 + B3 SINE B2 1 202 -14 3 1502 928 151 200 6 chr13 120207075 120207255 -77057 - B3 SINE B2 0 216 2 3 1502 1207 41 7 7 chr13 120207833 120207981 -76331 + B1_Mus1 SINE Alu 1 148 0 3 1502 211 106 20 41 chr13 120207983 120208032 -76280 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 3 1502 8250 28 0 2 chr13 120208035 120208966 -75346 - RLTR13B3 LTR ERVK 0 929 1 3 1502 1485 67 0 39 chr13 120209167 120209370 -74942 - B2_Mm2 SINE B2 0 195 1 3 1502 1347 144 101 55 chr13 120210036 120210108 -74204 - ORR1A4 LTR MaLR 0 329 265 3 1502 472 99 12 0 chr13 120210108 120210189 -74123 + L1Md_F3 LINE L1 6499 6580 -4 3 1502 1347 159 111 55 chr13 120210189 120210455 -73857 - ORR1A4 LTR MaLR -72 287 8 3 1502 432 97 0 0 chr13 120210467 120210529 -73783 + (TA)n Simple_repeat Simple_repeat 2 63 0 3 1502 305 294 33 65 chr13 120211974 120212127 -72185 - ORR1E LTR MaLR -167 192 45 3 1502 575 334 129 13 chr13 120212163 120212466 -71846 - MTE-int LTR MaLR -40 1540 1203 3 1502 297 0 0 0 chr13 120212545 120212578 -71734 + (TG)n Simple_repeat Simple_repeat 1 33 0 3 1502 411 21 0 0 chr13 120212578 120212625 -71687 + (GA)n Simple_repeat Simple_repeat 1 48 0 3 1502 298 268 69 11 chr13 120212700 120212787 -71525 - B4A SINE B4 -15 277 186 3 1502 289 284 26 35 chr13 120212911 120213024 -71288 - MTE-int LTR MaLR -472 1108 997 3 1502 398 229 43 103 chr13 120213096 120213374 -70938 - L1MD LINE L1 -879 5480 5217 3 1502 246 128 0 0 chr13 120213390 120213429 -70883 + (T)n Simple_repeat Simple_repeat 1 39 0 3 1502 1216 61 0 0 chr13 120213429 120213576 -70736 - B1_Mus2 SINE Alu 0 147 1 3 1502 238 211 0 0 chr13 120213754 120213806 -70506 - URR1B DNA MER1_type 0 225 174 3 1502 309 252 228 31 chr13 120213792 120213919 -70393 + ID_B1 SINE B4 67 218 -6 3 1502 523 225 27 0 chr13 120213813 120213924 -70388 + PB1D9 SINE Alu 6 119 -1 3 1502 1307 53 47 6 chr13 120213927 120214099 -70213 + B2_Mm2 SINE B2 2 180 -15 3 1502 259 0 71 24 chr13 120214099 120214141 -70171 + (CAAAA)n Simple_repeat Simple_repeat 1 44 0 3 1502 939 151 10 91 chr13 120214153 120214350 -69962 - URR1B DNA MER1_type -45 180 1 3 1502 373 250 69 15 chr13 120215422 120215552 -68760 + ID_B1 SINE B4 82 218 -6 3 1502 1254 175 18 91 chr13 120215556 120215832 -68480 + RMER1C Other Other 1084 1339 -3 3 1502 423 300 135 15 chr13 120216285 120216552 -67760 + MER33 DNA MER1_type 2 300 -24 3 1502 180 0 0 0 chr13 120216574 120216594 -67718 + (T)n Simple_repeat Simple_repeat 1 20 0 3 1502 1350 70 0 0 chr13 120216714 120217103 -67209 + (TG)n Simple_repeat Simple_repeat 1 389 0 3 1502 222 171 0 0 chr13 120217115 120217156 -67156 + (TG)n Simple_repeat Simple_repeat 1 41 0 3 1502 37 86 0 0 chr13 120217607 120217700 -66612 + GC_rich Low_complexity Low_complexity 1 93 0 3 1502 22 35 0 0 chr13 120217761 120217790 -66522 + GC_rich Low_complexity Low_complexity 1 29 0 3 1502 261 0 0 0 chr13 120217889 120217918 -66394 + (CGG)n Simple_repeat Simple_repeat 3 31 0 3 1502 891 53 0 0 chr13 120218549 120218662 -65650 + (GA)n Simple_repeat Simple_repeat 1 113 0 3 1502 426 176 0 0 chr13 120218878 120218963 -65349 + CT-rich Low_complexity Low_complexity 4 88 0 3 1502 233 319 14 0 chr13 120219306 120219378 -64934 + L2a LINE L2 3302 3374 -52 3 1502 204 40 0 0 chr13 120219705 120219730 -64582 + (TTG)n Simple_repeat Simple_repeat 3 27 0 3 1502 351 0 0 0 chr13 120220104 120220143 -64169 + (TC)n Simple_repeat Simple_repeat 2 40 0 3 1502 219 299 35 0 chr13 120220292 120220379 -63933 - PB1D7 SINE Alu 0 120 31 3 1502 352 269 92 7 chr13 120221238 120221380 -62932 - B3A SINE B2 -18 180 27 3 1502 764 183 209 17 chr13 120221403 120221575 -62737 - B3 SINE B2 -10 206 2 3 1502 271 271 99 14 chr13 120221750 120221892 -62420 + Charlie8 DNA MER1_type 62 215 -2213 3 1502 516 266 92 65 chr13 120222308 120222461 -61851 + RSINE1 SINE B4 3 159 -6 3 1502 1224 35 7 0 chr13 120223091 120223235 -61077 - B1_Mm SINE Alu 0 147 3 3 1502 21 71 0 0 chr13 120224453 120224495 -59817 + AT_rich Low_complexity Low_complexity 1 42 0 3 1502 1019 223 0 32 chr13 120225089 120225307 -59005 - B3 SINE B2 -5 211 1 3 1502 213 288 40 14 chr13 120225491 120225565 -58747 - B1F SINE Alu -9 140 65 3 1502 192 135 0 0 chr13 120225570 120225607 -58705 + (TCTG)n Simple_repeat Simple_repeat 2 38 0 3 1502 525 126 0 0 chr13 120225610 120225697 -58615 - B2_Mm2 SINE B2 -31 164 78 3 1502 291 0 0 0 chr13 120226367 120226402 -57910 - U2 snRNA snRNA -153 35 1 3 1502 357 308 0 0 chr13 120227439 120227530 -56782 + BC1_Mm scRNA scRNA 1 91 -61 3 1502 448 231 64 9 chr13 120227601 120227710 -56602 - B1F2 SINE Alu -8 141 27 3 1502 307 285 118 31 chr13 120227710 120227728 -56584 - ID_B1 SINE B4 -8 216 79 3 1502 1321 94 0 40 chr13 120228136 120228335 -55977 + B2_Mm2 SINE B2 1 191 -4 3 1502 188 187 60 107 chr13 120229198 120229282 -55030 - L3 LINE CR1 -1651 2838 2759 3 1502 392 212 38 0 chr13 120230299 120230379 -53933 + B1F SINE Alu 46 128 -21 3 1502 222 37 0 0 chr13 120230379 120230406 -53906 + (TC)n Simple_repeat Simple_repeat 2 28 0 3 1502 531 45 0 0 chr13 120230406 120230471 -53841 + (TA)n Simple_repeat Simple_repeat 1 66 0 3 1502 1086 130 65 0 chr13 120230560 120230729 -53583 + B2_Mm2 SINE B2 2 181 -14 3 1502 201 74 0 0 chr13 120230857 120230884 -53428 + (TAA)n Simple_repeat Simple_repeat 2 28 0 3 1502 389 195 0 24 chr13 120230942 120231026 -53286 + Lx9 LINE L1 7287 7368 -276 3 1502 1938 166 88 23 chr13 120231031 120231419 -52893 - MTC LTR MaLR -8 413 1 3 1502 245 167 78 62 chr13 120231419 120231483 -52829 + Lx9 LINE L1 7365 7429 -215 3 1502 28 0 0 0 chr13 120231559 120231587 -52725 + AT_rich Low_complexity Low_complexity 1 28 0 3 1502 21 36 0 0 chr13 120231811 120231839 -52473 + AT_rich Low_complexity Low_complexity 1 28 0 3 1502 1161 37 0 0 chr13 120231885 120232021 -52291 + B1_Mus2 SINE Alu 1 136 -11 3 1502 1004 147 78 10 chr13 120232125 120232318 -51994 + B3 SINE B2 1 206 -10 3 1502 375 357 28 14 chr13 120233748 120233890 -50422 + B1F SINE Alu 1 144 -5 3 1502 249 320 80 0 chr13 120233899 120233974 -50338 + ID4 SINE ID 3 83 0 3 1502 246 62 0 0 chr13 120233974 120234006 -50306 + (GAGAA)n Simple_repeat Simple_repeat 1 32 0 3 1502 1199 68 0 0 chr13 120234028 120234175 -50137 - B1_Mus2 SINE Alu 0 147 1 3 1502 228 67 0 0 chr13 120234233 120234263 -50049 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 3 1502 282 298 25 58 chr13 120235000 120235121 -49191 - B1F1 SINE Alu -32 117 1 3 1502 243 243 54 54 chr13 120235059 120235133 -49179 - ID_B1 SINE B4 -84 140 67 3 1502 446 268 220 6 chr13 120235264 120235437 -48875 + B3 SINE B2 1 210 -6 3 1502 416 187 136 74 chr13 120235484 120235646 -48666 + Lx5 LINE L1 6872 7043 -7 4 1502 864 123 87 0 chr13 120235675 120235813 -48499 + B1_Mur4 SINE Alu 1 150 0 4 1502 779 214 71 47 chr13 120236000 120236211 -48101 + B3 SINE B2 1 216 0 4 1502 318 138 0 0 chr13 120236652 120236710 -47602 + (T)n Simple_repeat Simple_repeat 1 58 0 4 1502 419 291 68 0 chr13 120236719 120236836 -47476 - RSINE1 SINE B4 -36 129 5 4 1502 1292 50 0 0 chr13 120236893 120237053 -47259 + B2_Mm2 SINE B2 2 161 -34 4 1502 225 0 0 0 chr13 120237055 120237080 -47232 + (CAAT)n Simple_repeat Simple_repeat 2 26 0 4 1502 1449 69 11 0 chr13 120237516 120237705 -46607 - B2_Mm1t SINE B2 -2 191 1 4 1502 209 33 33 0 chr13 120238023 120238053 -46259 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4 1502 1076 87 0 0 chr13 120238053 120238191 -46121 - B1_Mus2 SINE Alu -9 138 1 4 1502 690 225 8 8 chr13 120238245 120238375 -45937 - B1_Mur2 SINE Alu -19 130 1 4 1502 325 340 20 10 chr13 120238292 120238393 -45919 - B4A SINE B4 -125 167 66 4 1502 771 196 0 14 chr13 120239147 120239292 -45020 - B1_Mur2 SINE Alu -5 144 2 4 1502 1429 192 117 20 chr13 120239659 120240000 -44312 - ORR1D1 LTR MaLR 0 374 1 4 1502 186 43 0 0 chr13 120241506 120241529 -42783 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 4 1502 255 191 94 16 chr13 120242073 120242137 -42175 + PB1 SINE Alu 42 110 -17 4 1502 213 0 53 26 chr13 120242137 120242175 -42137 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4 1502 657 104 15 1 chr13 120242178 120242282 -42030 - B1_Mus1 SINE Alu -12 108 1 4 1502 241 208 12 38 chr13 120242821 120242901 -41411 + T-rich Low_complexity Low_complexity 2 79 0 4 1502 370 127 0 0 chr13 120242944 120242999 -41313 - B2_Mm2 SINE B2 -94 101 47 4 1502 1191 102 12 0 chr13 120243034 120243201 -41111 - B2_Mm1t SINE B2 -22 171 3 4 1502 1242 41 0 0 chr13 120243789 120243936 -40376 + B1_Mm SINE Alu 1 147 0 4 1502 222 37 0 0 chr13 120243936 120243963 -40349 + (A)n Simple_repeat Simple_repeat 1 27 0 4 1502 306 245 213 0 chr13 120243978 120244072 -40240 + PB1 SINE Alu 12 125 -2 4 1502 400 308 52 25 chr13 120244031 120244076 -40236 + B4 SINE B4 42 167 -125 4 1502 680 224 8 0 chr13 120244076 120244201 -40111 + B1_Mur2 SINE Alu 1 126 -23 4 1502 400 308 52 25 chr13 120244201 120244225 -40087 + B4 SINE B4 168 241 -51 4 1502 1191 54 0 0 chr13 120244625 120244772 -39540 - B1_Mm SINE Alu 0 147 1 4 1502 658 291 77 26 chr13 120244826 120245098 -39214 - B4A SINE B4 -6 286 1 4 1502 404 301 22 15 chr13 120245187 120245322 -38990 + RSINE1 SINE B4 2 137 -28 4 1502 297 0 0 0 chr13 120245909 120245942 -38370 + (T)n Simple_repeat Simple_repeat 1 33 0 4 1502 224 350 17 0 chr13 120247423 120247483 -36829 + ID4 SINE ID 13 73 -10 4 1502 312 321 74 87 chr13 120247498 120247740 -36572 - MLT1G3 LTR MaLR -148 447 209 4 1502 277 262 103 73 chr13 120248341 120248477 -35835 + LTR65 LTR ERV1 24 163 -506 4 1502 1184 163 25 0 chr13 120249441 120249644 -34668 - B3 SINE B2 -8 208 1 4 1502 1151 62 14 0 chr13 120250145 120250291 -34021 + B1_Mur4 SINE Alu 2 149 -1 4 1502 338 117 33 0 chr13 120250296 120250356 -33956 + (GGAA)n Simple_repeat Simple_repeat 4 65 0 4 1502 867 135 42 7 chr13 120250930 120251072 -33240 + B1_Mus1 SINE Alu 1 147 -1 4 1502 207 70 70 0 chr13 120251622 120251665 -32647 + (TTTG)n Simple_repeat Simple_repeat 3 48 0 4 1502 200 404 37 0 chr13 120252503 120252612 -31700 - L2b LINE L2 -18 3408 3296 4 1502 280 352 93 31 chr13 120252675 120252964 -31348 - L2b LINE L2 -209 3166 2866 4 1502 21 0 0 0 chr13 120253140 120253161 -31151 + AT_rich Low_complexity Low_complexity 1 21 0 4 1502 2979 9 27 0 chr13 120253282 120253619 -30693 - ORR1A0 LTR MaLR 0 346 1 4 1502 201 222 184 53 chr13 120254014 120254090 -30222 - MIRb SINE MIR -47 221 136 4 1502 23 33 0 0 chr13 120254352 120254382 -29930 + AT_rich Low_complexity Low_complexity 1 30 0 4 1502 1057 127 0 0 chr13 120255189 120255339 -28973 - B1_Mur4 SINE Alu 0 150 1 4 1502 1602 37 5 0 chr13 120255463 120255654 -28658 - B2_Mm1t SINE B2 0 193 2 4 1502 1013 238 156 25 chr13 120256067 120256392 -27920 - MTD LTR MaLR -22 397 50 4 1502 293 350 0 0 chr13 120256553 120256633 -27679 + PB1 SINE Alu 44 123 -4 4 1502 230 311 79 75 chr13 120256942 120257182 -27130 - ORR1E LTR MaLR -11 348 108 4 1502 621 165 34 17 chr13 120259050 120259167 -25145 - PB1D9 SINE Alu 0 120 2 4 1502 270 0 0 0 chr13 120260197 120260227 -24085 + (CA)n Simple_repeat Simple_repeat 2 31 0 4 1502 199 50 75 0 chr13 120260496 120260536 -23776 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 4 1502 1214 41 0 14 chr13 120260539 120260687 -23625 - B1_Mus2 SINE Alu 0 147 2 4 1502 1247 112 21 0 chr13 120261077 120261265 -23047 - B2_Mm2 SINE B2 -2 193 2 4 1502 243 0 0 0 chr13 120261795 120261822 -22490 + (T)n Simple_repeat Simple_repeat 1 27 0 4 1502 1117 43 0 0 chr13 120261822 120261961 -22351 - B1_Mus1 SINE Alu 0 148 10 4 1502 625 195 172 0 chr13 120262007 120262135 -22177 - RSINE1 SINE B4 -14 151 2 4 1502 206 304 38 29 chr13 120262376 120262481 -21831 - L2c LINE L2 -16 3371 3266 4 1502 2020 164 226 18 chr13 120262844 120263348 -20964 - RMER21A LTR ERV1 -338 609 1 4 1502 909 159 59 0 chr13 120263382 120263552 -20760 - RLTR20B3 LTR ERVK -376 201 22 4 1502 442 269 21 56 chr13 120264334 120264476 -19836 + RSINE1 SINE B4 29 165 0 4 1502 495 250 9 0 chr13 120264941 120265049 -19263 + PB1D9 SINE Alu 1 109 -11 4 1502 1778 187 122 3 chr13 120265049 120265419 -18893 - MTC LTR MaLR -7 414 1 4 1502 605 226 0 0 chr13 120265735 120265850 -18462 - PB1D10 SINE Alu -1 116 2 4 1502 1133 88 94 0 chr13 120265865 120266036 -18276 - B2_Mm1t SINE B2 -5 188 2 4 1502 804 204 133 0 chr13 120266675 120266871 -17441 - URR1A DNA MER1_type -4 222 1 4 1502 253 256 99 18 chr13 120266925 120267096 -17216 - L1MA6 LINE L1 -23 6277 6093 4 1502 3453 68 29 15 chr13 120267393 120267870 -16442 - L1_Mus3 LINE L1 -2 6636 6153 4 1502 225 108 0 0 chr13 120267981 120268018 -16294 + (TG)n Simple_repeat Simple_repeat 1 37 0 4 1502 279 157 0 0 chr13 120269019 120269070 -15242 + (TG)n Simple_repeat Simple_repeat 1 51 0 4 1502 497 250 81 147 chr13 120269447 120269644 -14668 + ID_B1 SINE B4 3 186 -38 4 1502 235 333 14 0 chr13 120269880 120269949 -14363 + ID4 SINE ID 3 72 -11 4 1502 259 215 60 30 chr13 120269998 120270065 -14247 - B4 SINE B4 -222 70 2 4 1502 308 97 0 3 chr13 120270068 120270125 -14187 - ORR1C2 LTR MaLR 0 384 321 4 1502 1579 149 192 0 chr13 120270161 120270469 -13843 + ORR1C2 LTR MaLR 4 370 -14 4 1502 229 184 61 0 chr13 120270523 120270572 -13740 + RSINE1 SINE B4 108 159 -6 4 1502 1227 99 43 27 chr13 120270719 120270905 -13407 - B2_Mm2 SINE B2 -5 190 2 4 1502 294 176 0 0 chr13 120270948 120270999 -13313 - B3 SINE B2 -100 116 66 4 1502 436 179 319 25 chr13 120271291 120271451 -12861 + B3 SINE B2 2 208 -8 4 1502 504 263 41 106 chr13 120271714 120271884 -12428 - B3A SINE B2 0 198 40 4 1502 246 95 0 0 chr13 120271893 120271935 -12377 + (T)n Simple_repeat Simple_repeat 1 42 0 4 1502 435 56 9 0 chr13 120271944 120272006 -12306 - B2_Mm2 SINE B2 -102 114 49 4 1502 220 163 23 23 chr13 120271975 120272019 -12293 - ID4_ SINE ID -6 77 34 4 1502 1237 87 46 0 chr13 120272019 120272192 -12120 - B2_Mm2 SINE B2 -13 182 2 4 1502 608 174 88 29 chr13 120272701 120272837 -11475 + B1F2 SINE Alu 1 144 -5 4 1502 27 0 0 0 chr13 120273527 120273554 -10758 + AT_rich Low_complexity Low_complexity 1 27 0 4 1502 747 312 55 14 chr13 120273636 120273925 -10387 - RMER15 LTR ERVL 0 575 275 4 1502 230 256 19 208 chr13 120273908 120274115 -10197 - RMER15 LTR ERVL -404 171 4 4 1502 394 229 199 54 chr13 120275084 120275250 -9062 + RLTR9A LTR ERVK 6 195 -173 4 1502 900 85 31 0 chr13 120275250 120275380 -8932 + B2_Mm2 SINE B2 49 182 -13 4 1502 419 186 243 0 chr13 120275441 120275581 -8731 - Lx9 LINE L1 -114 7530 7357 4 1502 789 127 17 0 chr13 120275726 120275844 -8468 + PB1D9 SINE Alu 1 120 0 4 1502 290 135 0 71 chr13 120276694 120276750 -7562 - B2_Mm2 SINE B2 -133 62 11 4 1502 207 268 17 51 chr13 120277258 120277376 -6936 + (CCGGG)n Simple_repeat Simple_repeat 2 115 0 4 1502 488 31 0 30 chr13 120277418 120277485 -6827 + (TCCC)n Simple_repeat Simple_repeat 3 67 0 4 1502 1473 36 0 0 chr13 120278113 120278364 -5948 + (CA)n Simple_repeat Simple_repeat 1 251 0 4 1502 474 234 109 0 chr13 120278498 120278635 -5677 + B3A SINE B2 37 188 -10 4 1502 826 134 50 39 chr13 120278755 120278934 -5378 - B2_Mm2 SINE B2 -14 181 1 4 1502 632 235 72 61 chr13 120279451 120279632 -4680 - B3A SINE B2 -11 187 5 4 1502 189 0 0 0 chr13 120280038 120280059 -4253 + (TTA)n Simple_repeat Simple_repeat 1 21 0 4 1502 2895 24 24 0 chr13 120280332 120280670 -3642 + ORR1A0 LTR MaLR 1 346 0 4 1502 188 315 133 27 chr13 120282515 120282590 -1722 + L2c LINE L2 3298 3380 -7 4 1502 450 270 146 4 chr13 120282933 120283067 -1245 + L1MA5 LINE L1 6003 6170 -130 5 1502 288 0 0 0 chr13 120283067 120283099 -1213 + (CA)n Simple_repeat Simple_repeat 2 33 0 5 1502 450 270 146 4 chr13 120283099 120283217 -1095 + L1MA5 LINE L1 6171 6290 -10 5 1502 808 241 29 6 chr13 120283217 120283388 -924 + B3A SINE B2 2 176 -22 5 1502 551 51 13 13 chr13 120283676 120283755 -557 + B2_Mm1t SINE B2 1 79 -114 5